# hmmscan :: search sequence(s) against a profile database
# HMMER 3.2.1 (June 2018); http://hmmer.org/
# Copyright (C) 2018 Howard Hughes Medical Institute.
# Freely distributed under the BSD open source license.
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query sequence file:             /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Erysiphe_necator-ASM79871v1/GCA_000798715.1_ASM79871v1_protein.faa
# target HMM database:             /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm
# output directed to file:         /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Erysiphe_necator-ASM79871v1/GCA_000798715.1_ASM79871v1_protein.PFam32-A
# per-seq hits tabular output:     /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Erysiphe_necator-ASM79871v1/GCA_000798715.1_ASM79871v1_protein.PFam32-A.tblout
# number of worker threads:        20
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       KHJ29991.1  [L=110]
Description: putative actin-like protein 6b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-35  121.9   0.0    2.6e-35  121.8   0.0    1.0  1  Actin     Actin


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.8   0.0   1.5e-39   2.6e-35     304     406 ..       4     109 ..       1     110 [] 0.94

  Alignments for each domain:
  == domain 1  score: 121.8 bits;  conditional E-value: 1.5e-39
       Actin 304 giselivaainacdvdlrpeLlanivvtGGnsllpglteRlekelaqlaskgv.kvkiiapee..erkysaWiGGSiLAslgtfqqlwvskqEYeEqGs 399
                 + +++++++i+ +d+dl + L++++v++GGn+ll g+++Rl +e+++++ +++ +vk + p+   er++s WiGGSiLAslgtfq +w+skqEYe+ G+
  KHJ29991.1   4 SFADVLFKSISLSDIDLLKVLYSSVVISGGNTLLTGFNDRLLAEITKKTEPQTiRVKLVHPNGltERIHSPWIGGSILASLGTFQRMWFSKQEYEDGGK 102
                 678999*****************************************9665545******9999*********************************** PP

       Actin 400 svverkc 406
                 +++++kc
  KHJ29991.1 103 MLINKKC 109
                 ******* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       275  (0.0153383); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.45
# Mc/sec: 733.63
//
Query:       KHJ29992.1  [L=120]
Description: putative dihydrouridine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       549  (0.0306208); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 865.96
//
Query:       KHJ29993.1  [L=351]
Description: hypothetical protein EV44_g6199 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      201  (0.0112109); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2510.89
//
Query:       KHJ29994.1  [L=80]
Description: hypothetical protein EV44_g5127 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       368  (0.0205254); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.25s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 647.09
//
Query:       KHJ29995.1  [L=132]
Description: hypothetical protein EV44_g4211 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0097   15.7   0.1      0.017   15.0   0.1    1.4  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   9.5e-07     0.017      62     117 ..       2      56 ..       1      58 [. 0.84

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 9.5e-07
  Exo_endo_phos_2  62 efleehslsllnllksgptfkssngsstiDltltsdnlals...kleleeedlgSDHrp 117
                      ++l+ h+l l+++   +p +   n  s+iDl+++s++l+ +   + ++ + d+++DH+p
       KHJ29995.1   2 NWLDRHGLILISEIG-VPAH---NLVSVIDLCFASEELVSKcitSSIQKDLDVTTDHLP 56 
                      799999999888877.3333...4479**************9998999999******97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 1069.87
//
Query:       KHJ29996.1  [L=132]
Description: hypothetical protein EV44_g4210 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.016   15.1   0.1      0.027   14.3   0.1    1.4  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   1.5e-06     0.027      62     117 ..       2      56 ..       1      58 [. 0.82

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.5e-06
  Exo_endo_phos_2  62 efleehslsllnllksgptfkssngsstiDltltsdnlals...kleleeedlgSDHrp 117
                      ++l+ h+l l+++   +p +   n  s+iDl+++s++l+ +   +  + + d+++DH+p
       KHJ29996.1   2 NWLDRHGLILISEIG-VPAH---NLVSVIDLCFASEELVSKcitSSVQKDLDVTTDHLP 56 
                      799999999888877.3333...4479**************99877788889*****87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1048.75
//
Query:       KHJ29997.1  [L=238]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.11   12.9   0.0       0.13   12.6   0.0    1.3  1  Tim17     Tim17/Tim22/Tim23/Pmp24 family


Domain annotation for each model (and alignments):
>> Tim17  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   7.3e-06      0.13      37      78 ..     110     151 ..      30     173 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 7.3e-06
       Tim17  37 rlreglrsvgkrgpslGknfgvvgglysgiecaleklRgked 78 
                  l+ ++ + ++r+++++ n+ v++++++g+e al  lR k++
  KHJ29997.1 110 ELQVIVEAEKRRAAQTAANLEVCTAIFNGVEIALLPLRVKTQ 151
                 3777788889************************99997765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1874.76
//
Query:       KHJ29998.1  [L=119]
Description: putative trafficking protein particle complex subunit 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-19   68.9   0.0    4.1e-19   68.7   0.0    1.0  1  TRAPP     Transport protein particle (TRAPP) component
  ------ inclusion threshold ------
      0.058   12.2   0.0      0.058   12.2   0.0    1.2  1  PNGaseA   Peptide N-acetyl-beta-D-glucosaminyl asparaginase a


Domain annotation for each model (and alignments):
>> TRAPP  Transport protein particle (TRAPP) component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.7   0.0   4.6e-23   4.1e-19      48     145 ..       3     104 ..       1     105 [. 0.85

  Alignments for each domain:
  == domain 1  score: 68.7 bits;  conditional E-value: 4.6e-23
       TRAPP  48 retdilevlkfickdlWkllfgkqidnlktnhrge...yvltdnefpltrfvelpke..ls....ylaflcGiirGaLenlgfpakVtahelpsdelrg 137
                 r +d++e++++i+k+++k+++++++++  + ++++   +++++n  pl++fvelp++  ++    y+++lcGi+rGaLe+++++++V+     +d lrg
  KHJ29998.1   3 RCLDFRETAEMIAKVGFKIFLNITPTVSSWTSDSKqfsLIFDEN--PLADFVELPDDgrAQdelwYSNILCGILRGALEMVQMQVEVKF---IADILRG 96 
                 5599*************************996666655666677..*********9998557899*******************66666...4668889 PP

       TRAPP 138 rttfeikv 145
                 +  +e+++
  KHJ29998.1  97 DDQTEMRI 104
                 98888876 PP

>> PNGaseA  Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   6.4e-06     0.058     138     201 ..       8      71 ..       2     108 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6.4e-06
     PNGaseA 138 aeaadlilpisarksasnsssafslpsdkatvtlslprntsravlsisasgqaaeEfWysNvls 201
                 +e+a++i  +  +   + ++ + s  sd+ + +l +++n    ++++   g+a++E WysN+l 
  KHJ29998.1   8 RETAEMIAKVGFKIFLNITPTVSSWTSDSKQFSLIFDENPLADFVELPDDGRAQDELWYSNILC 71 
                 56777777777766667777777888888999999999*999********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       307  (0.0171231); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.36
# Mc/sec: 996.66
//
Query:       KHJ29999.1  [L=209]
Description: putative ppe family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        1.3    7.9  11.4        1.8    7.5  11.4    1.2  1  SLC12       Solute carrier family 12
        2.7    6.7  14.3        3.3    6.4  14.3    1.3  1  Presenilin  Presenilin


Domain annotation for each model (and alignments):
>> SLC12  Solute carrier family 12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5  11.4    0.0002       1.8     107     206 ..      97     197 ..      81     209 .] 0.38

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0002
       SLC12 107 dafdlklavaiLrlkegldvsellqeeeeeeeekekkeaeesekeeeekkkakkkklleekskekeekekleekdsnlslseekk.eeekekkkekkkk 204
                 da+ l++    Lr  +g + s++ + ++  + ++++ ++++++++++++++ +++++ +++ ++k+++++ ++++ n++ ++ ++ ++++++ +++++ 
  KHJ29999.1  97 DAMGLDMTAPKLRSTDGANGSDIANVTDLGTGSDNNGNNNNNNNNNNNNNNGNNNNNNSSNGNNKNNNNNNNNNNGNNNNNNGNNnNNNDNNGNNNNNG 195
                 566666666677877777777776666555554444443333332222222222222221111111111111111111111111101111111111111 PP

       SLC12 205 ke 206
                 ++
  KHJ29999.1 196 NN 197
                 11 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  14.3   0.00037       3.3     239     300 ..     134     193 ..      73     209 .] 0.39

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.00037
  Presenilin 239 eeaekkkeeasesskeeeseeesseksaqsseseeeseeesseaessaeesseekeseesse 300
                 ++++++++++++++ +++++++s+ ++++++  +++++++ ++++++ +++++++++ ++++
  KHJ29999.1 134 NNNNNNNNNNNNNNGNNNNNNSSNGNNKNNN--NNNNNNNGNNNNNNGNNNNNNDNNGNNNN 193
                 1111111111111111111111111111111..11111111111111111111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1624  (0.0905795); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                       122  (0.00680462); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.38
# Mc/sec: 1642.26
//
Query:       KHJ30000.1  [L=318]
Description: hypothetical protein EV44_g3320 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2296.62
//
Query:       KHJ30001.1  [L=170]
Description: hypothetical protein EV44_g0284 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      0.004   17.3   0.4     0.0056   16.9   0.4    1.2  1  CAF20     Cap associated factor
  ------ inclusion threshold ------
      0.027   14.4   0.2      0.048   13.6   0.2    1.4  1  DUF4920   Domain of unknown function (DUF4920)
       0.12   12.1   0.4       0.18   11.5   0.4    1.2  1  TMEM174   Transmembrane protein 174


Domain annotation for each model (and alignments):
>> CAF20  Cap associated factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.4   9.3e-07    0.0056      24     100 ..       8     101 ..       5     123 .. 0.71

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 9.3e-07
       CAF20  24 eaFnaliekvke.......lqaekee....akkwknGehgnersyhhlnrRRsSrsaa.....kkPklkkkka.vkvDedGwstlekkkkasfg 100
                 ++F+ali++ +        +q+ ++     a  ++n  + ++r+yh  +r  +S s+a      k k+ kk+  v   e  wst ++++++  +
  KHJ30001.1   8 KTFQALIAQLRTsislslkVQKSQQTayytADGYENDSFYTDRQYHGQKRSQTSSSSAnnkeqSKTKFGKKACfVCSKEGCWSTRHSPEERMKS 101
                 6899999999999998866444444423334455555999******99998877764444666788888887767777777***9988876433 PP

>> DUF4920  Domain of unknown function (DUF4920)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.2     8e-06     0.048       6      45 ..      66     106 ..      61     112 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 8e-06
     DUF4920   6 kekdtlkvkvkgkveevcqkkGcWlkldledge.evrVkfK 45 
                 ++k++ k+k+  k   vc+k GcW + + ++++ + +  fK
  KHJ30001.1  66 NNKEQSKTKFGKKACFVCSKEGCWSTRHSPEERmKSMADFK 106
                 6788999*****************99887776546777777 PP

>> TMEM174  Transmembrane protein 174
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.4     3e-05      0.18     158     213 ..      20      73 ..       5      85 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3e-05
     TMEM174 158 lkssaaavtasgppqyytiypldnaafvedeessaalavdsenerssesaeeleek 213
                   s + +v+ s    yyt+   +n +f +d +++ + +  s++++ss +++e++++
  KHJ30001.1  20 SISLSLKVQKSQQTAYYTADGYENDSFYTDRQYHGQKR--SQTSSSSANNKEQSKT 73 
                 456677888899999*****************999665..3333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1025  (0.0571699); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1276.93
//
Query:       KHJ30002.1  [L=493]
Description: putative tryptophanyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-19   70.2   0.3    3.6e-19   69.2   0.0    1.6  2  tRNA-synt_1b  tRNA synthetases class I (W and Y)


Domain annotation for each model (and alignments):
>> tRNA-synt_1b  tRNA synthetases class I (W and Y)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0     2e-23   3.6e-19       3     286 ..      95     381 ..      93     387 .. 0.85
   2 ?   -4.5   0.7      0.55   9.8e+03     111     273 ..     463     474 ..     449     486 .. 0.40

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 2e-23
                   HS--EEEEEEETSSS.-BGGGHHHHHHHHHHHH.TTSEEEEEEEHHHHHTTTTT-SSHHHHHHHHHHHHHHHHHHHHHTCHTTTEEEEETHHHHTTH CS
  tRNA-synt_1b   3 erplrvysGidPTgk.lHlGylvplkklvelqk.aghevffliaDlhAiigdpskaeerklrkreevlenaikaqlakgldpekaevvlqsewlehl 97 
                    +p+ +y+G  P+++ +H+G++vp++   ++q+   + +++++ D + +i   +    r++++ + ++ n  k ++a+g+dp+k+ ++  +e++   
    KHJ30002.1  95 GKPFFLYTGRGPSSDsMHIGHTVPFEFTKWIQDvFDVPLIIMLTDDEKYIFSEK----RTIEEVTSYTWNNAKDIIAVGFDPKKTFIFSDYEYMGGA 187
                   578899*********************999998678888999999999999999....9999999999999999*********************99 PP

                   HHHHHHHHHHTTCBHHHHHHHHHCCHHCSSS.......C--BHHHHHHHHHHHHHHHHTCHS..EEEEEGGGHHHHHHHHHHHHHHHHHSTTSS-EE CS
  tRNA-synt_1b  98 elaellrdlgklgslnrmlqfksvkkrleeg.......egislgeftYplLqaaDilllkad..lvpgGsDQkqnielgrdlarrfnkkevfkkpeg 185
                    +  +  +++k+++ln   +   ++++   g       +g +    ++p   ++D+ l ++   l p   DQ+  ++++rd+a r++      kp  
    KHJ30002.1 188 FYKNV-TRISKHITLNVARAVFGFTDSSCIGkihfgaiQGATSFASSFPHIFGNDESLSNQIpcLIPCAIDQDPYFRVTRDVAARLHFA----KPAL 279
                   99886.57888999999998888665555532346566444444449**********99999************************766....***9 PP

                   EEET-BBSTTSSS.BTTCETTCGC-BTTCCHHHHHHHHH.HCHCSTTC..SHHHHHHHHHTHHHCHHHHHHHHCCSEEESSHHHHHHHHHCCCCHHH CS
  tRNA-synt_1b 186 ltvplltgldGek.KmSKSagnsaIfLddekesvkkkiq.kavtdsde..evekllklktelsnelierleavsgkkpkreaeellaeevtklvhgg 278
                   +  ++l+ l+G   KmS S ++saIf+ d ++++  ki+ +a++  ++    ++ l + +e +   + +l  +++ ++  e+ e+++++  +++  g
    KHJ30002.1 280 IHSRFLDALQGPGsKMSASIDSSAIFMKDTPQKITNKINrYAYSGGQAteAEQRALGGDVEKDV-SFRYLTFFMEDDT--ELDEIKQAYTAGKMLTG 373
                   9999*****98655********************999962677777777667777777777777.8888888888888..**************999 PP

                   HHHHHHHH CS
  tRNA-synt_1b 279 dlkkalae 286
                   +lk   a+
    KHJ30002.1 374 ELKAICAK 381
                   99986665 PP

  == domain 2  score: -4.5 bits;  conditional E-value: 0.55
                   BHHHHHHHHHCCHHCSSSC--BHHHHHHHHHHHHHHHHTCHSEEEEEGGGHHHHHHHHHHHHHHHHHSTTSS-EEEEET-BBSTTSSSBTTCETTCG CS
  tRNA-synt_1b 111 slnrmlqfksvkkrleegegislgeftYplLqaaDilllkadlvpgGsDQkqnielgrdlarrfnkkevfkkpegltvplltgldGekKmSKSagns 207
                   +l++m ++++                                                                                       
    KHJ30002.1 463 KLAKMKAIEE--------------------------------------------------------------------------------------- 472
                   2222222222....................................................................................... PP

                   C-BTTCCHHHHHHHHHHCHCSTTCSHHHHHHHHHTHHHCHHHHHHHHCCSEEESSHHHHHHHHHCC CS
  tRNA-synt_1b 208 aIfLddekesvkkkiqkavtdsdeevekllklktelsnelierleavsgkkpkreaeellaeevtk 273
                                                                                   +k
    KHJ30002.1 473 ----------------------------------------------------------------KK 474
                   ................................................................21 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (493 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1176  (0.0655921); expected 358.6 (0.02)
Passed bias filter:                      591  (0.0329634); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 3377.15
//
Query:       KHJ30003.1  [L=257]
Description: hypothetical protein EV44_g6006 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      575  (0.0320709); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 1952.10
//
Query:       KHJ30004.1  [L=244]
Description: putative effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       559  (0.0311785); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1931.35
//
Query:       KHJ30005.1  [L=746]
Description: hypothetical protein EV44_g0786 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-25   89.3   0.1    4.5e-25   87.8   0.1    1.9  1  DUF2439   Protein of unknown function (DUF2439)


Domain annotation for each model (and alignments):
>> DUF2439  Protein of unknown function (DUF2439)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.8   0.1   2.5e-29   4.5e-25       1      80 [.      26     106 ..      26     107 .. 0.97

  Alignments for each domain:
  == domain 1  score: 87.8 bits;  conditional E-value: 2.5e-29
     DUF2439   1 vkeyevlYTsqvtkKsKkWhDGflklhsfnkrvvLydeesklvessflknekeeleegeelelek..ylvqveeliseeerd 80 
                 v ++++l+T++v++K+K+W+DG+lk+h+fnkr+++ de+s++v++s+l+ + ++leegeel le+  +lvqv e ++++++d
  KHJ30005.1  26 VLDFRCLFTRDVQRKQKRWQDGRLKFHTFNKRIMVHDERSNFVGDSYLS-SGHKLEEGEELSLEQngILVQVGEYMGKRDQD 106
                 678**********************************************.7**************************99988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (746 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       919  (0.0512577); expected 358.6 (0.02)
Passed bias filter:                      282  (0.0157287); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.39
# Mc/sec: 5708.22
//
Query:       KHJ30006.1  [L=338]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       906  (0.0505327); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 2709.64
//
Query:       KHJ30007.1  [L=521]
Description: putative cycloheximide resistance protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-40  137.4  36.8    5.5e-40  137.4  36.8    1.6  2  MFS_1     Major Facilitator Superfamily
      3e-09   36.3  27.7    1.3e-08   34.2  27.6    2.1  1  Sugar_tr  Sugar (and other) transporter
    1.5e-05   23.6   5.6      3e-05   22.7   5.6    1.4  1  TRI12     Fungal trichothecene efflux pump (TRI12)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.4  36.8   9.2e-44   5.5e-40       2     351 ..      89     470 ..      88     472 .. 0.82
   2 ?   -0.5   0.2     0.078   4.6e+02      17      51 ..     473     501 ..     460     509 .. 0.60

  Alignments for each domain:
  == domain 1  score: 137.4 bits;  conditional E-value: 9.2e-44
       MFS_1   2 llaaflsalarsilgpalplalaedlgispseigl.lltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslw.lllvlrvlqGlg 98 
                  l+ +l+++a++il+p+++  + +++ ++ +++g  ++++y lg +++ l++++ls+ +Gr +v+ l++++f+++ ++++  s++  +l+++r+l+G++
  KHJ30007.1  89 TLVCCLNIAAIGILAPSAS-SILSEFKAQNASLGSlVVSIYILGLGFGPLIMAPLSEVIGRVPVYNLSVFGFVIFNICCAK-STSLqILIFFRFLSGVF 185
                 57889**************.78888887777766659999***********************************555554.66666************ PP

       MFS_1  99 agalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee......... 188
                 +++  ++g+a i+d+f++++rg+++ l+++g  ++ i+ p++gg++++ lgWr++f++lai+s +++ l++++l+e++ +   ++++ ++         
  KHJ30007.1 186 GSVTETNGGASISDLFSPSQRGLVLTLYALGPVIAGIISPVIGGFITDGLGWRWIFWLLAIMSGIFGTLGMVFLRETYAPVILERKAARLrketgnmrf 284
                 ************************************************************************************999999999998999 PP

       MFS_1 189 ..........kgtgpaplvpawkallkdpvlw.illialllfffgfsglltllplylqevlgls....glllaglllallalvgailallagrls.dr. 270
                            +t+  ++v ++k+l  +p ++  +++  l+++  + +l++++ ++ + ++++s    +l ++g   ++++l+g++++ + + ++    
  KHJ30007.1 285 rsvfqnntssRKTFLLAFVRPFKLLIFSPIIFsTAIFLGLVNGYQYLMLTSYSSIF-RNQYHFSisaiSLSYLG--AGVGCLLGLFIFAIQTTILyGSq 380
                 88888777765555555555799999999776544444444455666699999998.*******9988777777..99999999888444444443556 PP

       MFS_1 271 ......lgrrrrlllallllllaalglallavtssavllllvlvl....iGfglgfvfpsllalasdlappeeagtasglfntagslggal 351
                       l +++rl  ++   +l+ lgl+l ++t    l++l+ +l    i++g+  vf ++l+++ d +p  +a++as  ++++++ ++ +
  KHJ30007.1 381 knketgLEPETRLRGIIWTYALMPLGLLLYGWTAQEKLHWLLPILgtgvISCGSLHVFLCILVYVIDCFPL-HAASASTGNTFLRNSVATV 470
                 788999999************************555555554444446677777777************85.4445555555555555444 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.078
       MFS_1  17 palplalaedlgispseigllltlyalgaavaslp 51 
                 +a p  + ++lg     +g+ ++l al ++++ ++
  KHJ30007.1 473 LAGP-PMFKSLG-----VGWGCSLLALISCILLPF 501
                 3333.6667777.....777777777755444443 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2  27.6   2.2e-12   1.3e-08      43     414 ..     116     483 ..      89     513 .. 0.67

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 2.2e-12
                 H...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHH CS
    Sugar_tr  43 essvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvs 141
                 + ++l +l+vsi+++G  +G l++ +l++++GR +++  +++ fvi ++++a ++   s+++li+ R+l+G++  ++ +     is +  ++ Rg + +
  KHJ30007.1 116 QNASLGSLVVSIYILGLGFGPLIMAPLSEVIGRVPVYNLSVFGFVIFNICCAKST---SLQILIFFRFLSGVFGSVTETNGGASISDLFSPSQRGLVLT 211
                 3445778************************************************...***************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHH.HHHHHHHHGGGS---HHHHHHTT-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH... CS
    Sugar_tr 142 lyqlaitfGilvaaifglglnktsnadgwrillglqlv.pallllilllflPESPrylvekgkeeeakevlaklrgeedadrelaeekdsleaeqeee. 238
                 ly l+ ++  +++ ++g ++ +  +   wr+ ++l ++ + ++  ++++fl+E+    +  +   +a +  ++       ++++   ++ +  ++++  
  KHJ30007.1 212 LYALGPVIAGIISPVIGGFITDGLG---WRWIFWLLAImSGIFGTLGMVFLRETYAPVILER---KAARLRKE-----TGNMRFRSVFQNNTSSRKTFl 299
                 *****99999999999999988888...*****986651568889*********22223222...44444333.....444555555555555533334 PP

                 ...HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHH..HTTTHHHHSS-THH....HHHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHH........ CS
    Sugar_tr 239 kaswkellssktvrqrlligvvlqifqqltGinaimy..ysptifenlglsks....llvtiivgvvnfvatfvaiflvdrfGRRtllllG........ 323
                  a++++++    ++ +++   ++ ++  ++G+ ++m   ys+ + ++ ++s s     +  ++vg++  +++f+  ++    G  +   +G        
  KHJ30007.1 300 LAFVRPFKLL--IFSPIIFSTAIFLG-LVNGYQYLMLtsYSSIFRNQYHFSISaislSYLGAGVGCLLGLFIFAI-QTTILYGSQKNKETGlepetrlr 394
                 6667777666..66776665555443.344555444322888888888888887777667777777766666544.44444444444444555555555 PP

                 HHHHHHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH CS
    Sugar_tr 324 aagmaicfvilgivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaig 414
                 +++ + +++ lg   + ++a++     ++ ++   +i + +l +  ++ v+v + fp++  s+ +   +++ + +  +i l  p +++++g
  KHJ30007.1 395 GIIWTYALMPLGLLLYGWTAQE-KLHWLLPILGTGVISCGSLHVFLCILVYVIDCFPLHAASASTG-NTFLRNSVATVIPLAGPPMFKSLG 483
                 5555555555553444444444.2222222333334455555566666677777777776544443.444444445566777777777777 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   5.6   4.9e-09     3e-05      59     245 ..     101     288 ..      86     304 .. 0.72

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 4.9e-09
       TRI12  59 vlqasasalpnilqdvgqsensslfstlwttgqavsilvmgrltdrfgrrpfvilthilglvgaivgcta.tkfntllaamtllgvaagpa.gasplfv 155
                 +l  sas++   ++   ++   sl+ +++ +g     l+m  l++ +gr p+     ++g+v   + c+  t ++ l+    l gv    +       +
  KHJ30007.1 101 ILAPSASSILSEFKAQ-NASLGSLVVSIYILGLGFGPLIMAPLSEVIGRVPVY-NLSVFGFVIFNICCAKsTSLQILIFFRFLSGVFGSVTeTNGGASI 197
                 4555555443333332.233457888999**********************65.556899988777776515666666666666775544413456789 PP

       TRI12 156 gelmsnktkflgllivsipvvvtsglspylgqrlaiqgswrwifyiyiitsaiavllivvwyypp.sfaqlhgkkvrkreelakldwigii 245
                  +l+s   + l l + ++  v+   +sp +g  ++    wrwif++  i+s i  +l +v+     +   l  k +r r+e  ++ +  ++
  KHJ30007.1 198 SDLFSPSQRGLVLTLYALGPVIAGIISPVIGGFITDGLGWRWIFWLLAIMSGIFGTLGMVFLRETyAPVILERKAARLRKETGNMRFRSVF 288
                 ******9999999888876666677**********999******************99998654413345666777778887776666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (521 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 3782.65
//
Query:       KHJ30008.1  [L=514]
Description: putative trna nucleotidyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-27   95.8   0.0    5.3e-27   94.7   0.0    1.6  1  PolyA_pol        Poly A polymerase head domain
    1.4e-05   24.7   0.0    4.3e-05   23.2   0.0    1.9  1  PolyA_pol_RNAbd  Probable RNA and SrmB- binding site of polym
    1.9e-05   24.7   1.3    4.8e-05   23.4   1.1    1.8  2  tRNA_NucTran2_2  tRNA nucleotidyltransferase domain 2 putativ


Domain annotation for each model (and alignments):
>> PolyA_pol  Poly A polymerase head domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.7   0.0   8.9e-31   5.3e-27       1     125 [.      38     183 ..      38     184 .. 0.88

  Alignments for each domain:
  == domain 1  score: 94.7 bits;  conditional E-value: 8.9e-31
                 EEEETHHHHHHHTT---CEEEEEEC.....S-HHHHHHHHHHHHT..-EEE...E.ETTTTCCCCEECCEEEEECCEECEEEEEE---SSHHH...... CS
   PolyA_pol   1 lylvGGaVRDlllgkepkDvDlatd.....aapeelakllrkkvk..eall...s.geefqtiavlekkqllevatfRlekdesdarnpesekste... 85 
                 l+++GG+VRD+llg +++D+D+a++     a  e++++ l+++++  +++l     g+  qt+a  ek+++le++t+ +  +  d++n ++e++++   
  KHJ30008.1  38 LRFAGGWVRDKLLGIPSNDIDVAINsmtgsAFTEQVQNFLKDETNlkRHRLtplDvGRCYQTAANPEKSKHLETSTMTILGYDVDFVNLRKETYSSesr 136
                 5899**********************999988899988886654311333222234889999999999999***********************999** PP

                 .......HHHHHHCTSSBGGGS-EEECTTTCEE-TTSHHHHHHTTEE CS
   PolyA_pol  86 .......sleeDlkrRDftiNalaynlnkgkvlDlfgGikdLkskvi 125
                        + eeD+ rRD tiNal+yn+++++++D++ G+kdL +k+i
  KHJ30008.1 137 npimefgTPEEDALRRDCTINALFYNIHTNEIEDYTCGLKDLTEKRI 183
                 *******************************************9998 PP

>> PolyA_pol_RNAbd  Probable RNA and SrmB- binding site of polymerase A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   7.2e-09   4.3e-05       1      59 [.     211     272 ..     211     276 .. 0.89

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 7.2e-09
  PolyA_pol_RNAbd   1 gFtIepeTaaairk...laplLkkispeRifeEllKlLlsghpeaglelLretgLlkylfPe 59 
                      +FtI+p ++a i +   ++   +ki+ eR+++E+ K+L + +p+ +l+  +++gL+  +f +
       KHJ30008.1 211 NFTIDPTCEAYINDqevMNAFHRKITRERVQVEVYKMLKGLNPHGALQYFDRLGLYYEIFTD 272
                      7999999999998833356699**********************************999965 PP

>> tRNA_NucTran2_2  tRNA nucleotidyltransferase domain 2 putative
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.2     7e+03      37      64 ..      69      99 ..      65     103 .. 0.73
   2 !   23.4   1.1     8e-09   4.8e-05      25     148 ..     360     501 ..     344     502 .. 0.70

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.2
  tRNA_NucTran2_2 37 likavtallkllekrknaeltklel...yka 64
                     ++++v++ lk  +++k ++lt+l++   y++
       KHJ30008.1 69 FTEQVQNFLKDETNLKRHRLTPLDVgrcYQT 99
                     6788888888888888888888866444665 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 8e-09
  tRNA_NucTran2_2  25 rsfLkswkfsnklikavtallkllekrk.....naeltklelykageealllaeel......aqaqgqa......edlqaldeiyqaLpIk... 98 
                      ++ Lk++k  +kl++++    + ++ r       ++++++  ++    ++ l+e++      ++    +      e+l+a+++ + +L+     
       KHJ30008.1 360 SDSLKHFKDVTKLKDSILRGDSWVKLRDtvgnlIRKMDQQGHWRLQVIFAILVEAMndqnskQK----TkanqtgENLDAWKKVVHHLEEMnlm 449
                      5567777777777777777777777777776664555555556666666666666643322222....13333568888888877777655677 PP

  tRNA_NucTran2_2  99 ...skkeLaitGkdLlealgvkpGpwlgeiLkeleqavvegeleNekeallef 148
                         s k L ++Gk L e +++kpG+w+  +L+++ + ++ +   N++++++e+
       KHJ30008.1 450 dpsSIKNL-VDGKILSEVFQKKPGKWVAPVLEFCMNWTLRNPEVNDRNKVIEE 501
                      88899***.************************99999888877877777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       901  (0.0502538); expected 358.6 (0.02)
Passed bias filter:                      652  (0.0363657); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 3655.42
//
Query:       KHJ30009.1  [L=227]
Description: putative dihydrofolate reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-28   97.6   1.8    1.5e-26   93.0   1.8    2.6  1  DHFR_1    Dihydrofolate reductase


Domain annotation for each model (and alignments):
>> DHFR_1  Dihydrofolate reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.0   1.8   8.4e-31   1.5e-26       2     141 ..       6     176 ..       5     214 .. 0.77

  Alignments for each domain:
  == domain 1  score: 93.0 bits;  conditional E-value: 8.4e-31
                 EEEEEEEETT-EEEBTTB-SS-..-HHHHHHHHHHHT.........TCEEEEEHHHHHCC-...S--TTCEEEEE-S-TT.........---..TTEE. CS
      DHFR_1   2 islivAvaengvIGkdnklpwh..lpeDlkrFkklTt.........gkpvimGrkTfeslg..krpLpnrkniVltrned.........lkv..egve. 75 
                 ++livA +++  IGk ++lpw   l++++++F ++T+          + vimGrkT++s++  +rpL +r niV+tr++               +  + 
  KHJ30009.1   6 LTLIVAATTQMGIGKAGTLPWAglLKKEMAYFARVTKrspssaipqQNVVIMGRKTWDSIPrqFRPLADRINIVVTRSAFndstmrddeK-KrsN--Ql 101
                 799******************7779*********997333333332578************8889***********98643333322221.1221..12 PP

                 .....EESSHHHHCCCCTTS..SEEEEEE-HHHHHHCGGG..-SEEEEEEESS----SEE--.---CCCEEEEEE CS
      DHFR_1  76 .....vvssleealalakee.keevfviGGaeiYkqalpl..adklylTeidaefegdtffp.eideeewelver 141
                      +v+s+e+al++++   + ++fviGGa+iY++a+++  a+++  T+i ++f+ dt fp ++++e  +++++
  KHJ30009.1 102 krdpiFVNSIESALKTTTMLgSMKIFVIGGAQIYETAIRMkeAKRILFTRILNDFDFDTRFPlNLNQEGTRKENS 176
                 3456699*******966665689************996542289******************7777655444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       413  (0.0230353); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1658.39
//
Query:       KHJ30010.1  [L=162]
Description: hypothetical protein EV44_g4183 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0061   16.1   0.0     0.0074   15.8   0.0    1.1  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   4.1e-07    0.0074     164     220 ..       3      85 ..       1      87 [. 0.94

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 4.1e-07
                 EECTTEEEEEESSHHH......HHHHHHHHHHHHHHTT--BEGGG-EEE.........................ESSEEETTE CS
       RVT_1 164 lrYaDDililskskee......lqelleaveewlkesglkinpeKtklvlft...................v.kseevkyLGv 220
                  r++DD+ +++ ++++      l+ + +++ +w+k++g +++pe  +l++f                       ++e+k+LGv
  KHJ30010.1   3 FRFVDDTNLVAWGRSArencytLELAHSKFLAWAKRYGAEFAPEIYQLIHFSrkrgssedlkekieleditInPRSEIKVLGV 85 
                 69***********99999************************************************99986369********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       348  (0.0194099); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1180.06
//
Query:       KHJ30011.1  [L=579]
Description: putative zinc knuckle domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-16   60.2   0.0    4.3e-16   58.8   0.0    1.8  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase
      7e-11   42.1   0.0    1.6e-10   40.9   0.0    1.6  1  RVT_1            Reverse transcriptase (RNA-dependent DNA pol
    6.8e-05   22.5   0.0    0.00065   19.3   0.0    2.5  1  Exo_endo_phos    Endonuclease/Exonuclease/phosphatase family
  ------ inclusion threshold ------
      0.079   13.2   0.2       0.16   12.2   0.2    1.4  1  zf-His_Me_endon  Zinc-binding loop region of homing endonucle


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.8   0.0   9.5e-20   4.3e-16       2     118 ..      77     200 ..      76     201 .. 0.84

  Alignments for each domain:
  == domain 1  score: 58.8 bits;  conditional E-value: 9.5e-20
  Exo_endo_phos_2   2 liisvYippsd..elenlestlekllselkspkiiilGDfNakhplWgsedtdssargeeLiefleehslsllnllksgptfkssng.....ss 88 
                      +i++vY p ++  el   ++t e +  + +  ++++lGDfN +hp+Wg++  + + r+++L++++  ++l l+ +++  ptf+++++     ++
       KHJ30011.1  77 RIVNVYSPTTSgsELTGWDETTEAIAHDRG--SCLFLGDFNCHHPMWGGHGAQRDTRAQQLLNYTLGNGLDLI-TPEGIPTFRRNGArgtiqET 167
                      799****99998778888888888888888..9****************887779****************44.44545***99888999*99* PP

  Exo_endo_phos_2  89 tiDltltsdnlals...kleleeedlgSDHrpi 118
                      +iDlt+++ +l++s   +   e+  +  DH pi
       KHJ30011.1 168 VIDLTFATGDLLKSihaCRPREDWCIRHDHIPI 200
                      **************9954555555677899988 PP

>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   0.0   3.6e-14   1.6e-10       3      86 ..     478     574 ..     476     577 .. 0.85

  Alignments for each domain:
  == domain 1  score: 40.9 bits;  conditional E-value: 3.6e-14
                 -TT.......S-EEE......-THHHHCTB--...........-------HHHH................HCCHTS-..-EEEEEEBCCGCCCSBB- CS
       RVT_1   3 Kkg......pgsyRpisllsvdykalnkliakrLkdvl..ekllsenqpgfrpgrstldav...edllkalkkkkka..klllklDlkkaFdsvple 86 
                 K+       p+syRpi+l +++ k+++kl+a+r+ +++   + l+  q+g r++rst+ a+   ++ ++++++ + +    +l lD+k+aFd+v+ +
  KHJ30011.1 478 KERhpdytlPSSYRPIALENSLAKIVEKLVANRMIEAAeqHNMLPWAQMGARKNRSTILALellTSTVQTAWEARPSrvVSMLGLDIKGAFDNVSKR 574
                 55555677789***************************989999********************777777788877723556789*********865 PP

>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   1.4e-07   0.00065      33     215 ..       9     278 ..       5     458 .. 0.73

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 1.4e-07
                    EEEEEEEBSCTCHHHHHHHHHTTCEEEEECCHECSSSTTSSEEEEEECSTE..EEEEEEEEEETSSSSGCEEEEEEEEEEEEEEECCCHHGHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  33 vlgLQEvdddelsriplllalggflgasstsptgggggggnggavlsrfpl..tslfrrtfiefndlvaalrreplaakleqlniashrdhdlvrd 126
                    v++LQE   +++ +        ++++++     ++  +   ++a l+++ +    + + ++++   +      e l         + +  +     
     KHJ30011.1   9 VVALQEPSLNPRTLD------TYCPRGYIL---CMEPTLETKVAFLISRDIgvANWTYKWYSNLVAEIKLSFHESLL--------RIVNVYSPTTS 87 
                    566666444444333......333333333...35555555555555555544333222222222222222222222........33334445556 PP

                    HHHHHHHHHHHHHHHHTTSEEEEEEE-SSSTSGGGBSCGHHHHHHCTTTH.................H..................SSCESCETTT CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................x..................xxxxxxxxxx RF
  Exo_endo_phos 127 lqllalllqvealnadrgapvivaGDfNarpsdddsrvlrtrglalapap.................v..................glyllgggpt 187
                       l  +++  ++ a+  ++++++GDfN ++  ++ +  +   +a                      +                  +   l  ++ 
     KHJ30011.1  88 GSELTGWDETTEAIAHDRGSCLFLGDFNCHHPMWGGHGAQRDTRAQQLLNytlgngldlitpegiptFrrngargtiqetvidltfATGDLLKSIH 183
                    66666677788888889999******************9999999988887776655555555444404444455555666677777777777777 PP

                    TTTTTTTTEB-BEEE...................................................................EEECHHHCCEEEE CS
                    xxxxxxxxxxxxxxx...................................................................xxxxxxxxxxxxx RF
  Exo_endo_phos 188 ptyvtraggsrlDri...................................................................laspalalfrsgv 215
                    + ++++ ++ r D+i                                                                   +a+pa+    ++ 
     KHJ30011.1 184 ACRPREDWCIRHDHIpieiilttgqmlnlerrrcvyhkanlekmksmireckweqaqqplvalqeviiqalnehcprahpspFAKPAWSAKATEL 278
                    77777777777788888888666666666666666666666666666666666666666666666666666666666666666666555555555 PP

>> zf-His_Me_endon  Zinc-binding loop region of homing endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   3.5e-05      0.16      69     116 ..     183     239 ..     163     252 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.5e-05
  zf-His_Me_endon  69 HlCg..ngeClnPdHlvve.....pkavNqeRktCkksakvkeekesiykvCkh..k 116
                      H C   + +C++ dH+ +e      + +N eR  C  + +  e+ +s+++ Ck   +
       KHJ30011.1 183 HACRprEDWCIRHDHIPIEiilttGQMLNLERRRCVYHKANLEKMKSMIRECKWeqA 239
                      77753378*******998844444589*********888889999999999987444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (579 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4082.50
//
Query:       KHJ30012.1  [L=69]
Description: hypothetical protein EV44_g3855 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0011   18.4   0.3     0.0017   17.8   0.3    1.3  1  CBP_BcsR       Cellulose biosynthesis protein BcsR
  ------ inclusion threshold ------
      0.086   12.3   0.3      0.091   12.2   0.3    1.1  1  Peptidase_C74  Pestivirus NS2 peptidase


Domain annotation for each model (and alignments):
>> CBP_BcsR  Cellulose biosynthesis protein BcsR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.3   1.9e-07    0.0017       5      33 ..      34      62 ..      33      63 .. 0.93

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.9e-07
    CBP_BcsR  5 inaLsqaFslpelrYiDIareerlasala 33
                +  L  +F++ +++  DI+r+++l+sal+
  KHJ30012.1 34 FLVLHILFHMHAVVLDDISRQAQLTSALQ 62
                5678999********************97 PP

>> Peptidase_C74  Pestivirus NS2 peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.3     1e-05     0.091      44      89 ..      16      61 ..       4      67 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1e-05
  Peptidase_C74 44 katliscvsskwqliymsyltldfmyymhrkvieeisggtniisrl 89
                     +li  v ++ ++    +l l ++++mh  v+++is  +++ s l
     KHJ30012.1 16 FLSLIDYVETHINISTYKFLVLHILFHMHAVVLDDISRQAQLTSAL 61
                   457899999999999999*******************999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      190  (0.0105974); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 544.69
//
Query:       KHJ30013.1  [L=398]
Description: hypothetical protein EV44_g3629 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-17   63.9   0.0    4.4e-15   56.0   0.0    2.2  2  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
      0.033   13.7   0.6      0.079   12.4   0.3    1.8  2  CHZ       Histone chaperone domain CHZ


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.0   0.00092       8.3       1      37 [.     115     152 ..     115     156 .. 0.91
   2 !   56.0   0.0   4.9e-19   4.4e-15     108     241 ..     161     296 ..     156     297 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.00092
       RVT_2   1 ktyrlvslPkdrkaigsrWvftkkkddl.kevkykarl 37 
                 kt++ v+  +   +i+ + vft k  d     k+k+r+
  KHJ30013.1 115 KTFEFVEQNSTMTPIPLKGVFTYKFGDAgYLFKFKSRI 152
                 799*********************98876889***997 PP

  == domain 2  score: 56.0 bits;  conditional E-value: 4.9e-19
       RVT_2 108 eeekvykLnkslyGlkqapllWnekidkvLkklgferseaesGlyvrgtgegklivalyvddlliagsdikile..dvkkelakkfklkdlgkvskfLG 204
                 +++ v +L ++lyGl+++p lW + ++ +Lk +g+++ + +  +++ +   + + +  +vddl+   + i+     ++ k+l+++++++ lg+++ fLG
  KHJ30013.1 161 RKGFVLRLLRALYGLRKSPKLWLKLLSGTLKYIGLQQVSRQPCVFTDY---DGISIFFFVDDLVFLFPAIRRPRalELLKKLTATYEFRVLGELDWFLG 256
                 67889******************************************9...459999******987776654331145568****************** PP

       RVT_2 205 ieiaq..eaggiklsladyiakvvkkfelt.daktvatPl 241
                 +++ +  ++ ++ ls++ y++k+ k+f+   + ++v+tP+
  KHJ30013.1 257 VKVSRnkSSRKLWLSQESYVEKICKEFDCEvQGRKVNTPI 296
                 ***984355667789************9762445566665 PP

>> CHZ  Histone chaperone domain CHZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.3   8.9e-06     0.079       7      26 ..      30      48 ..      28      53 .. 0.88
   2 ?   -2.9   0.0      0.54   4.9e+03      10      15 ..     377     382 ..     373     382 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8.9e-06
         CHZ  7 eEIDtsNIIsgGRRTRgkti 26
                ++ID+ N I+ G RTR kt+
  KHJ30013.1 30 AGIDPRNTIT-GKRTRNKTA 48
                79*******7.*******97 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.54
         CHZ  10 DtsNII 15 
                 +tsNI 
  KHJ30013.1 377 STSNIL 382
                 69**95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2863.57
//
Query:       KHJ30014.1  [L=1112]
Description: putative c6 zinc finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-07   31.8  15.4      2e-07   31.0  15.4    1.4  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
      0.077   12.7   0.2        1.3    8.8   0.0    2.8  3  DUF4116   Domain of unknown function (DUF4116)


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0  15.4   2.3e-11     2e-07       1      39 [.     213     250 ..     213     251 .. 0.93

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 2.3e-11
                 SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCCCE CS
     Zn_clus   1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfysesskr 39 
                 +aCd Cr  K KCd+++P+C++Ck+++++C+ y+++  +
  KHJ30014.1 213 QACDCCRMAKAKCDEGRPTCGSCKENGKDCR-YRDPPPK 250
                 69*****************************.9988765 PP

>> DUF4116  Domain of unknown function (DUF4116)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   0.00015       1.3       2      22 ..     506     526 ..     499     528 .. 0.59
   2 ?   -0.3   0.0       0.1   9.2e+02      15      23 ..     880     888 ..     873     890 .. 0.83
   3 ?   -2.9   0.0      0.68   6.1e+03       4      23 ..     931     958 ..     929     960 .. 0.63

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00015
     DUF4116   2 rEivleavkkngsalkylsee 22 
                 rEivl++v+++ +++++l + 
  KHJ30014.1 506 REIVLKLVESYKNNINNLHPI 526
                 555555555555555555444 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.1
     DUF4116  15 alkylseeL 23 
                 +++y+se+L
  KHJ30014.1 880 SIQYVSENL 888
                 89*****99 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 0.68
     DUF4116   4 ivleavkkngs........alkylseeL 23 
                 +vl+++++            ++ +s+e+
  KHJ30014.1 931 FVLQVLERSEPpcpeaaqsLIEQISDEY 958
                 7888888774344566666666677665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       756  (0.0421663); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.87u 0.29s 00:00:01.15 Elapsed: 00:00:00.49
# Mc/sec: 6818.21
//
Query:       KHJ30015.1  [L=463]
Description: putative cell surface [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.3e-12   45.6   0.0    2.1e-11   44.3   0.0    1.8  1  Gly_transf_sug  Glycosyltransferase sugar-binding region cont


Domain annotation for each model (and alignments):
>> Gly_transf_sug  Glycosyltransferase sugar-binding region containing DXD motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   0.0   1.2e-15   2.1e-11       6      93 ..      92     177 ..      87     190 .. 0.81

  Alignments for each domain:
  == domain 1  score: 44.3 bits;  conditional E-value: 1.2e-15
  Gly_transf_sug   6 kaieslakahpdyqvvvlskelekvrvaildlefllsd.tp......wfeeakkllplfialsDllRlaiLykyGGiYlDtDvivlkslrnsiga 93 
                        +s+ +++p y++ +l+++ +        +++++ +  p       +  ++ +l   i ++DllR++i+y  GG+Y D+Dv  l+++ +  ++
      KHJ30015.1  92 HRARSWTSKNPGYRYEMLTDGND--------MDYVEHHfGPaglnrqDIVHTYRTLNAKIIKADLLRYLIMYVEGGLYADIDVEALRPI-ERFIP 177
                     56789****************88........666666655555544655667779999999****************************.55444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2074  (0.115679); expected 358.6 (0.02)
Passed bias filter:                      665  (0.0370907); expected 358.6 (0.02)
Passed Vit filter:                       142  (0.00792013); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.32s 00:00:01.00 Elapsed: 00:00:00.44
# Mc/sec: 3178.20
//
Query:       KHJ30016.1  [L=378]
Description: putative ccaat-binding factor complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-19   69.6   0.4    3.4e-19   68.9   0.4    1.4  1  CBFD_NFYB_HMF    Histone-like transcription factor (CBF/NF-Y)
    4.4e-14   52.9   0.2    4.4e-14   52.9   0.2    3.2  2  Histone          Core histone H2A/H2B/H3/H4
    6.3e-05   23.2  10.2      0.004   17.4   1.5    2.2  2  DDHD             DDHD domain
     0.0064   16.6  12.5       0.19   11.8   1.3    2.2  2  Neur_chan_memb   Neurotransmitter-gated ion-channel transmemb
  ------ inclusion threshold ------
      0.011   15.2  17.8      0.017   14.6   5.7    2.3  2  SpoIIP           Stage II sporulation protein P (SpoIIP)
      0.016   15.5   7.3      0.016   15.5   7.3    2.4  2  MMR1             Mitochondrial Myo2 receptor-related protein
      0.016   15.2  60.7      0.071   13.1  17.7    2.2  2  TFIIA            Transcription factor IIA, alpha/beta subunit
      0.061   13.9  15.4       0.11   13.1   1.6    2.3  2  Adaptin_binding  Alpha and gamma adaptin binding protein p34
      0.072   13.2  17.2      0.026   14.6   3.7    2.3  2  Eapp_C           E2F-associated phosphoprotein
       0.13   11.1  14.0      0.099   11.4   3.8    2.1  2  Tim54            Inner membrane protein import complex subuni
       0.13   12.9  40.7      0.048   14.3  15.9    3.1  3  Pex14_N          Peroxisomal membrane anchor protein (Pex14p)
       0.15   12.4   0.0       0.15   12.4   0.0    2.3  1  CENP-X           CENP-S associating Centromere protein X
       0.18   11.8  31.3       0.14   12.2  12.6    2.3  2  TERB2            Telomere-associated protein TERB2
       0.34   11.0  17.8        0.2   11.7   4.0    2.2  2  Gti1_Pac2        Gti1/Pac2 family
       0.42   11.0  22.3      0.029   14.8   5.4    2.3  2  EPL1             Enhancer of polycomb-like
       0.53   10.3  16.8       0.21   11.7   2.8    2.3  2  RP-C_C           Replication protein C C-terminal region
       0.53    8.7   7.2       0.58    8.6   2.0    2.0  2  Cellulose_synt   Cellulose synthase
       0.94    9.2  18.6       0.23   11.2   4.7    2.2  2  Band_3_cyto      Band 3 cytoplasmic domain
        1.3    8.2   9.7       0.98    8.6   3.3    2.2  2  DUF1943          Domain of unknown function (DUF1943)
        1.3    7.7  20.6       0.52    9.0   3.4    2.3  2  Bul1_N           Bul1 N terminus
        1.5    7.5   8.8        1.4    7.6   0.3    2.2  2  Pkinase_fungal   Fungal protein kinase
        2.4    7.4  23.0       0.23   10.8   5.7    2.2  2  FAM76            FAM76 protein
        2.4    8.9   8.1         14    6.4   3.2    2.4  2  Pet20            Mitochondrial protein Pet20
        2.5    7.6  23.8      0.082   12.4   6.6    2.3  2  DUF775           Protein of unknown function (DUF775)
        2.6    8.3  23.5        0.3   11.3   8.2    2.3  2  DUF4770          Domain of unknown function (DUF4770)
        3.5    7.0  17.7       0.99    8.8   7.1    2.2  2  GNAT_acetyltr_2  GNAT acetyltransferase 2
        4.5    7.1  10.1       0.94    9.3   0.6    2.3  2  VIT1             VIT family
          5    7.3  21.3      0.035   14.3   1.6    2.4  2  DUF5308          Family of unknown function (DUF5308)
        7.2    6.1  72.1        1.6    8.3  41.3    2.3  2  Spt20            Spt20 family


Domain annotation for each model (and alignments):
>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.9   0.4   5.5e-22   3.4e-19       2      65 .]     120     183 ..     119     183 .. 0.98

  Alignments for each domain:
  == domain 1  score: 68.9 bits;  conditional E-value: 5.5e-22
                    XXXHHHHHHHHHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF   2 eLPiarvkkImksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65 
                    +LP+ar+kk+mk dp++r+i+ +A++l+a+ +  fi+el+ +A+ +++++kr+t+++ +i++A+
     KHJ30016.1 120 QLPLARIKKVMKADPEVRMISAEAPILFAKGCDIFITELTMRAWIHAEENKRRTLQRSDIASAL 183
                    69************************************************************97 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   0.2   7.2e-17   4.4e-14      59     128 ..     115     183 ..     105     186 .. 0.95
   2 ?    0.9   4.2      0.88   5.4e+02      20      54 ..     290     325 ..     279     345 .. 0.47

  Alignments for each domain:
  == domain 1  score: 52.9 bits;  conditional E-value: 7.2e-17
                 SXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHH CS
     Histone  59 dlliqklpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlAr 128
                 d + ++lp aR +++++k + e  +isaea+ ++++ +  +++el+++A++ a+++KR+T+++ Di +A+
  KHJ30016.1 115 DYKLHQLPLAR-IKKVMKADPEVRMISAEAPILFAKGCDIFITELTMRAWIHAEENKRRTLQRSDIASAL 183
                 678899*****.*******************************************************997 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.88
                 XXXXXXHT.TS-SSSSB--TTT-XTTHHHHHHHHHH CS
     Histone  20 kvsakker.kasskskkkkkrryrpgtvalkeirky 54 
                 +v +++++ + +s+s++++++ +r++++ ++   ++
  KHJ30016.1 290 QVQQSQQQlHTQSSSQQQQSQSSRQQQQQQQSLSQS 325
                 445555555333333333333333333322222222 PP

>> DDHD  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   1.5   6.4e-06     0.004     124     170 ..       6      75 ..       1     193 [. 0.54
   2 !   11.3   1.8   0.00046      0.28     117     156 ..     293     332 ..     195     373 .. 0.49

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 6.4e-06
        DDHD 124 eeesaslaessksherasesskasqeskaaesstasssaksskaee...............................k 170
                 ++++++++++++++++++++++++q+++++++++ ++                                         
  KHJ30016.1   6 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQ--------VpdqrrnqpaydmnlgghfgasaalsnqgsvlV 75 
                 2222222222222222222222222222222222211........111122223344445554444444444444330 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00046
        DDHD 117 nrslelaeeesaslaessksherasesskasqeskaaess 156
                 +++++l++++s+++++s++s ++++++++ sq+++ ++s+
  KHJ30016.1 293 QSQQQLHTQSSSQQQQSQSSRQQQQQQQSLSQSQTPQQSR 332
                 1112222222222222222222222222222222222222 PP

>> Neur_chan_memb  Neurotransmitter-gated ion-channel transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   4.0   0.00086      0.53     114     162 ..       6      54 ..       1     123 [. 0.53
   2 !   11.8   1.3    0.0003      0.19     122     197 ..     244     353 ..     154     372 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00086
                     --------.--------------------------------------SS CS
  Neur_chan_memb 114 evkdnekklssgasseaeelilskskseskkaklseeqgsekastckck 162
                     +++++++++++++++++++  +++++++ +++++ ++++++++++ +++
      KHJ30016.1   6 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQVPDQRRNQPAYD 54 
                     2222222222333333333333333333333333344444444444443 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.0003
                     ...................................------....--------------------------------SS---TTGGG--.....- CS
  Neur_chan_memb 122 l..................................ssgass....eaeelilskskseskkaklseeqgsekastckckckegeeaspstqlske 178
                     +                                            +++ + +++s+++++++++s++q+s+++ +++ ++++ +++++++q ++ 
      KHJ30016.1 244 QrpgiytsdlqsgsgptgyggptgqmygemdgmygY----AsiqpQQPIYQVQQSQQQLHTQSSSQQQQSQSSRQQQQQQQSLSQSQTPQQSRQA 334
                     044555555555555555555444444443333331....0333355556666666666666666666666666666666666677777777777 PP

                     ----TTTTTHHHHHHHHHH CS
  Neur_chan_memb 179 elspelkkavegvkyiadh 197
                     ++  +l+   +  ++ +++
      KHJ30016.1 335 PMGHDLSAVRNDSNVAQHS 353
                     7777777777766665544 PP

>> SpoIIP  Stage II sporulation protein P (SpoIIP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   5.7   2.8e-05     0.017      27      67 ..       7      48 ..       1     116 [. 0.58
   2 ?    6.4   4.1    0.0088       5.4      25      66 ..     289     331 ..     265     368 .. 0.50

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.8e-05
      SpoIIP 27 sekeekekeeeeeeekeeeeeeeikkeekeeekekee.dsee 67
                +++++++++++++++++++++++++++++++++ ++  d+++
  KHJ30016.1  7 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQVpDQRR 48
                111122222222222222222222222222222222223333 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0088
      SpoIIP  25 eesekeekekeeeeeeekeeeeeeeikkeekeeekekee.dse 66 
                  ++++++++  +++++++++++++ ++++++++ +++++ +++
  KHJ30016.1 289 YQVQQSQQQLHTQSSSQQQQSQSSRQQQQQQQSLSQSQTpQQS 331
                 2222233333333333333333333333333333333332222 PP

>> MMR1  Mitochondrial Myo2 receptor-related protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   7.3   2.6e-05     0.016     104     148 ..       2      47 ..       1     143 [. 0.69
   2 ?    3.5   9.8      0.12        73      99     148 ..     291     332 ..     274     376 .. 0.46

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.6e-05
        MMR1 104 eqlre.eksqqksksaekekqkrsvaakseqesekveelekskser 148
                 eql + +++qq+++++++++q+++++++++q+++++++ ++  ++r
  KHJ30016.1   2 EQLSQqQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQVPDQR 47 
                 4443312333333333333333333333334434445555544444 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.12
        MMR1  99 iketleqlreeksqqksksaekekqkrsvaakseqesekveelekskser 148
                 ++++ +ql++        ++ +++q+ + + +++q+++   + + +++ r
  KHJ30016.1 291 VQQSQQQLHT--------QSSSQQQQSQSSRQQQQQQQSLSQSQTPQQSR 332
                 2233333322........22222222222222222222222222233222 PP

>> TFIIA  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  34.9    0.0035       2.1     189     247 ..       5      64 ..       1      83 [. 0.35
   2 ?   13.1  17.7   0.00011     0.071     170     270 ..     283     351 ..     163     376 .. 0.41

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0035
       TFIIA 189 aepqqqlekqqqqqqqqqqqqqqqqvqqqqqeesqqaqqa.sqe.qvagsqvessqtdgae 247
                 +++qqq++ qqqqqqqqqqqqqqqq+qqqqq+++qq qq   q+ +++   ++   + ga+
  KHJ30016.1   5 SQQQQQQQ-QQQQQQQQQQQQQQQQQQQQQQQQQQQVQQVpDQRrNQPAYDMNLGGHFGAS 64 
                 22222211.1111111111111112222222122222222222223333444444444444 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 0.00011
       TFIIA 170 aaqssvaalqaqsqqaqalaepqqqlekqqqqqqqqqqqqqqqqvqqqqqeesqqaqqasqeqvagsqvessqtdgaedaleeespv.legelsaeeea 267
                 + q+ + ++q+++qq+++++ +qqq++++ +qqqqqqq +                          sq++ +q++        ++p+ ++    +++++
  KHJ30016.1 283 QPQQPIYQVQQSQQQLHTQSSSQQQQSQSSRQQQQQQQSL--------------------------SQSQTPQQSR-------QAPMgHDLSAVRNDSN 348
                 1122222222222222222222222111111111111111..........................1111111111.......1122222222222222 PP

       TFIIA 268 gaq 270
                  aq
  KHJ30016.1 349 VAQ 351
                 222 PP

>> Adaptin_binding  Alpha and gamma adaptin binding protein p34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.6   0.00018      0.11      26      60 ..       7      43 ..       1     188 [. 0.63
   2 ?    6.4   6.3     0.021        13      30      76 ..     292     338 ..     282     377 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00018
  Adaptin_binding 26 taslsnrnaslet..eadeaqlekeeeeqdpsqpast 60
                     +++++++++++++  + +++q+++++ +q+++q +++
       KHJ30016.1  7 QQQQQQQQQQQQQqqQQQQQQQQQQQQQQQQQQVQQV 43
                     1111111111111001111111111111111121222 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.021
  Adaptin_binding  30 snrnasleteadeaqlekeeeeqdpsqpastepdksaaesesadaef 76 
                      ++++++l t+++ +q+++++ +q+++q++s+++++  ++s +a+ + 
       KHJ30016.1 292 QQSQQQLHTQSSSQQQQSQSSRQQQQQQQSLSQSQTPQQSRQAPMGH 338
                      66788889999999*****************9999999999987765 PP

>> Eapp_C  E2F-associated phosphoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   3.7   4.2e-05     0.026      76     109 ..       6      39 ..       1     108 [. 0.61
   2 ?    4.4   5.6      0.06        37      71     106 ..     295     329 ..     282     366 .. 0.49

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 4.2e-05
      Eapp_C  76 ykeaesekkkkkkkkskkkeekeeeaeaeeaeee 109
                 ++++++++++++++++++++++++++++++++++
  KHJ30016.1   6 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 39 
                 2222222222222222222222222222111111 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.06
      Eapp_C  71 eevlkykeaesekkkkkkkkskkkeekeeeaeaeea 106
                 +++l+++ ++s+++++++++++++++++ +++++ +
  KHJ30016.1 295 QQQLHTQ-SSSQQQQSQSSRQQQQQQQSLSQSQTPQ 329
                 2222222.2222222222222222222222222212 PP

>> Tim54  Inner membrane protein import complex subunit Tim54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   3.8   0.00016     0.099     204     245 ..       7      45 ..       1      98 [. 0.48
   2 ?    5.3   2.6     0.011         7     194     240 ..     285     331 ..     268     359 .. 0.47

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00016
       Tim54 204 eeeeeeeekeeeeeeeeeeeeekeeekeeekeeeeeeeekek 245
                 +++   ++++++++++++++++++++++++++++++ ++ ++
  KHJ30016.1   7 QQQ---QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQVPD 45 
                 111...111111111111112222222222222222222222 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.011
       Tim54 194 eepeeeeaeeeeeeeeeekeeeeeeeeeeeeekeeekeeekeeeeee 240
                 ++p  + ++++++ +++++++++++++++++++++++ +++++ +++
  KHJ30016.1 285 QQPIYQVQQSQQQLHTQSSSQQQQSQSSRQQQQQQQSLSQSQTPQQS 331
                 33333333333333333333333333222222222222222222222 PP

>> Pex14_N  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3  15.9   7.7e-05     0.048      74     123 ..       7      50 ..       1      92 [. 0.47
   2 ?    0.5   0.1       1.4   8.8e+02      76      94 ..     210     228 ..     170     257 .. 0.39
   3 ?    5.5  13.3      0.04        24      61     101 ..     292     330 ..     269     355 .. 0.42

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 7.7e-05
     Pex14_N  74 satpqpqaasqtsqsspspsppaqqqqqqyrpPivtypefltkppkpppp 123
                 ++++q+q+++q++q+++++++++qqqqqq+++++++       p ++  +
  KHJ30016.1   7 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQV------PDQRRNQ 50 
                 1111111111111111111111111111111222222......2222222 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 1.4
     Pex14_N  76 tpqpqaasqtsqsspspsp 94 
                  p++ a++ ++ ++  p+p
  KHJ30016.1 210 VPPTMAPTRQQIQTLRPPP 228
                 1111111111111111111 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.04
     Pex14_N  61 saseqa.qeesasssatpqpqaasqtsqsspspsppaqqqqq 101
                 ++s+q+ +  ++sss+++q+q++ q++q+++s s ++q++qq
  KHJ30016.1 292 QQSQQQlH--TQSSSQQQQSQSSRQQQQQQQSLS-QSQTPQQ 330
                 11111111..111111111111111111111111.1111111 PP

>> CENP-X  CENP-S associating Centromere protein X
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00023      0.15      18      53 ..     138     173 ..     123     195 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00023
                 EE-CCCHHHHHHHHHHHHHHHHHHHHHHHHHTT-SE CS
      CENP-X  18 kItkdalelvaeylklFvrEavaRaaeeaeeegkee 53 
                  I+ +a  l+a+  ++F++E  +Ra ++aee++ ++
  KHJ30016.1 138 MISAEAPILFAKGCDIFITELTMRAWIHAEENKRRT 173
                 48999999*******************888877665 PP

>> TERB2  Telomere-associated protein TERB2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2  12.6   0.00022      0.14     114     160 ..       6      50 ..       1      91 [. 0.50
   2 ?    5.5  10.8     0.025        15     113     160 ..     291     333 ..     278     358 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00022
       TERB2 114 eqssevhsaeepeiakdslleekeeqasklaksaeksatstsksekq 160
                 +q+++ + ++++++++++ ++++++q++++++++++ ++   + ++q
  KHJ30016.1   6 QQQQQ-QQQQQQQQQQQQ-QQQQQQQQQQQQQQQQQVQQVPDQRRNQ 50 
                 11111.111111111111.1112222222222222333333333344 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.025
       TERB2 113 veqssevhsaeepeiakdslleekeeqasklaksaeksatstsksekq 160
                 v+     +s+++ + + +s++++++++ ++++++++ s+++t+++ +q
  KHJ30016.1 291 VQ-----QSQQQLHTQSSSQQQQSQSSRQQQQQQQSLSQSQTPQQSRQ 333
                 33.....34444444444444444444444455555555555555443 PP

>> Gti1_Pac2  Gti1/Pac2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   4.0   0.00033       0.2      94     148 ..       8      60 ..       1     107 [. 0.50
   2 ?    5.2   5.9     0.033        21      87     134 ..     290     333 ..     269     371 .. 0.43

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00033
                 ----------------.................---------------------- CS
   Gti1_Pac2  94 kskestkkeesksekasssssesseakessssseskasksskslekdserslvgs 148
                 ++++++ ++++++++ ++++++++++++++++++ ++  ++++++ +++ +l g+
  KHJ30016.1   8 QQQQQQ-QQQQQQQQ-QQQQQQQQQQQQQQQQQQVQQVPDQRRNQPAYDMNLGGH 60 
                 111111.11111111.111111111111222221224444444555555555555 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.033
                 -----------------------.................---.----- CS
   Gti1_Pac2  87 kkkkkkkkskestkkeesksekasssssesseakesssssesk.askss 134
                 + ++++++ ++++++++++s++++++++++     +s s++++ +++++
  KHJ30016.1 290 QVQQSQQQLHTQSSSQQQQSQSSRQQQQQQ-----QSLSQSQTpQQSRQ 333
                 333322222222222222222211111111.....11111111122222 PP

>> EPL1  Enhancer of polycomb-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   5.4   4.6e-05     0.029      25      65 ..       7      45 ..       1     141 [. 0.56
   2 ?    2.1   8.9      0.36   2.2e+02      31      69 ..     294     330 ..     280     372 .. 0.42

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 4.6e-05
        EPL1 25 seseeeiseknsnkensqqavetgvdkkeenekhqviaaak 65
                +++++++++++++++++ q+++++++++++++++ v +  +
  KHJ30016.1  7 QQQQQQQQQQQQQQQQQ-QQQQQQQQQQQQQQQQ-VQQVPD 45
                11111111111111111.1111111111111111.222222 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.36
        EPL1  31 iseknsnkensqqavetgvdkkeenekhqviaaakkkes 69 
                  +++ +++++sqq++++  +++++++  q ++++++ ++
  KHJ30016.1 294 SQQQLHTQSSSQQQQSQSSRQQQQQQ--QSLSQSQTPQQ 330
                 22222222222111111111111111..11111111111 PP

>> RP-C_C  Replication protein C C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.8   0.00034      0.21      55      99 ..       7      47 ..       1     138 [. 0.60
   2 ?    4.5   6.3     0.055        34      55     101 ..     292     333 ..     274     355 .. 0.52

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00034
      RP-C_C 55 nesqnerhiqnsnpdsssesepasekereekeaaaasaeaepsek 99
                +++q+++++q+ ++    +++++++++++++++++++ ++ p+++
  KHJ30016.1  7 QQQQQQQQQQQQQQ----QQQQQQQQQQQQQQQQQQQVQQVPDQR 47
                11111111111111....111222222222222222222222222 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.055
      RP-C_C  55 nesqnerhiqnsnpdsssesepasekereekeaaaasaeaepsekks 101
                 ++sq++ h q+s ++++s+s   s+++++++++ ++s+++++  +++
  KHJ30016.1 292 QQSQQQLHTQSSSQQQQSQS---SRQQQQQQQSLSQSQTPQQ--SRQ 333
                 45566666666666433333...2222222222222222222..222 PP

>> Cellulose_synt  Cellulose synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   2.0   0.00094      0.58     312     375 ..       6      69 ..       2     100 .. 0.69
   2 ?    3.0   0.2     0.047        29     279     337 ..     266     325 ..     251     357 .. 0.47

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00094
  Cellulose_synt 312 krkkkkkkkkekkkkaskkkeseaeileledidealegdeeekssllsqlklekkfGqssvlva 375
                     +++++++++++++++++++++++++ ++ +++++  ++ ++ +++    ++l  +fG s+ l +
      KHJ30016.1   6 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQVPDQRRNQPAYDMNLGGHFGASAALSN 69 
                     3444444444444444444444444455555555556688888999999**********99876 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.047
  Cellulose_synt 279 tGcvfrr.qalyGfdppkakkkkektvvsslclgkrkkkkkkkkekkkkaskkkeseaei 337
                     tG ++     +yG+ + + ++   +   s+  l ++ +++++++++ ++++++++s ++ 
      KHJ30016.1 266 TGQMYGEmDGMYGYASIQPQQPIYQVQQSQQQLHTQSSSQQQQSQSSRQQQQQQQSLSQS 325
                     666664415789998877666554433222222222222222222211111111111111 PP

>> Band_3_cyto  Band 3 cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   4.7   0.00038      0.23     106     137 ..       8      39 ..       1     121 [. 0.61
   2 ?    4.0   6.1     0.058        36      99     136 ..     296     333 ..     273     363 .. 0.42

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00038
                  --EE--SSS-SS-HHHHHHTTTTTSS--.... CS
  Band_3_cyto 106 kkaskellskqssleteeakaseslsksssee 137
                  ++++++++++q+++++++++++++++++++++
   KHJ30016.1   8 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 39 
                  11111111111111111111111111111111 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.058
                  ---------EE--SSS-SS-HHHHHHTTTTTSS--... CS
  Band_3_cyto  99 gsllsekkkaskellskqssleteeakaseslskssse 136
                  ++l+++ ++++++++s++++++++++ ++++++++s +
   KHJ30016.1 296 QQLHTQSSSQQQQSQSSRQQQQQQQSLSQSQTPQQSRQ 333
                  11111111111111111111111112222222222222 PP

>> DUF1943  Domain of unknown function (DUF1943)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   3.3    0.0016      0.98      81     129 ..       5      54 ..       1     119 [. 0.76
   2 ?    3.7   0.5     0.049        30      83     117 ..     286     324 ..     251     343 .. 0.51

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0016
     DUF1943  81 lkkksekekkeeskrrkrsvqkrk.qdikeeikkkleklakklkidkeep 129
                 ++++++++++++++ +++++q+++ q+++++++++++++ ++  ++++  
  KHJ30016.1   5 SQQQQQQQQQQQQQQQQQQQQQQQqQQQQQQQQQQVQQVPDQRRNQPAYD 54 
                 44434444444444444444444458899999999999999888887654 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.049
     DUF1943  83 k.....ksekekkeeskrrkrsvqkrkqdikeeikkklek 117
                 +     ++++++++++++++++++++ + ++++++++l++
  KHJ30016.1 286 QpiyqvQQSQQQLHTQSSSQQQQSQS-SRQQQQQQQSLSQ 324
                 13333323333333333333332222.2233333333333 PP

>> Bul1_N  Bul1 N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   3.4   0.00084      0.52      73     108 ..       8      43 ..       1     135 [. 0.62
   2 ?    4.4   9.3      0.02        13      48     115 ..     283     350 ..     270     373 .. 0.53

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00084
      Bul1_N  73 vsasseslsssslsevsareeeeeealeteesleae 108
                 +++++++ +++++++++++++++++++++++++++ 
  KHJ30016.1   8 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQV 43 
                 111111111111111111111111111222222221 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.02
      Bul1_N  48 hdlPPsYeevesssasslsssssasvsasseslsssslsevsareeeee......ealeteesleaeekkneei 115
                 + + P+Y+  +s+++ +++sss++++s+ss + +++++s +++++ +++      +       l+a +++++ +
  KHJ30016.1 283 QPQQPIYQVQQSQQQLHTQSSSQQQQSQSSRQQQQQQQSLSQSQTPQQSrqapmgH------DLSAVRNDSNVA 350
                 55669999999888888444444444444444444444444444333332334442......333333222222 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.3    0.0022       1.4     244     278 ..      10      47 ..       1     183 [. 0.67
   2 ?    3.6   2.9     0.036        22     242     281 ..     292     332 ..     270     363 .. 0.50

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0022
  Pkinase_fungal 244 ssqelsskaevklkksesskkvekrsvdssv...stsk 278
                     ++q+++++++ ++++++ ++++++++ +++v   +++ 
      KHJ30016.1  10 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVqqvPDQR 47 
                     11111111111111111111111111111112112222 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.036
  Pkinase_fungal 242 ssssqelsskaevklkksesskkvekrsvdssv.stskrsr 281
                     ++s+q+l++++++++++s+ss+++++++ + s+ +t ++sr
      KHJ30016.1 292 QQSQQQLHTQSSSQQQQSQSSRQQQQQQQSLSQsQTPQQSR 332
                     23333344444444444444444333333322222222222 PP

>> FAM76  FAM76 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   5.7   0.00036      0.23     139     190 ..       8      42 ..       1      92 [. 0.45
   2 ?    2.5   9.3      0.12        75     138     192 ..     296     344 ..     282     376 .. 0.35

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00036
       FAM76 139 keeeeekrskskkkkskskkskkskekskekkaskkkskkhkkrssrlevsk 190
                 +++++++++++++++++                 +++++++++++++++v++
  KHJ30016.1   8 QQQQQQQQQQQQQQQQQ-----------------QQQQQQQQQQQQQQQVQQ 42 
                 11111111111111111.................111111111111111111 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.12
       FAM76 138 akeeeeekrskskkkkskskkskkskekskekkaskkkskkhkkrssrlevskle 192
                 ++ +++++++++++++s+++++++      ++ +++++ +++++++   + s+++
  KHJ30016.1 296 QQLHTQSSSQQQQSQSSRQQQQQQ------QSLSQSQTPQQSRQAPMGHDLSAVR 344
                 111111111111111111111111......1111222222222222233333333 PP

>> Pet20  Mitochondrial protein Pet20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   3.2     0.023        14      44      84 ..      10      46 ..       1      86 [. 0.46
   2 ?    4.9   0.2     0.065        40      27      68 ..     287     323 ..     245     353 .. 0.62

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.023
       Pet20 44 kkekeeklneqevleeeekeieelakesgtggiksggvngt 84
                +++    +++q+ +++++++ ++ +++++++  + ++v  +
  KHJ30016.1 10 QQQ----QQQQQQQQQQQQQQQQQQQQQQQQQQQVQQVPDQ 46
                111....1111111111222222222222222222333333 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.065
       Pet20  27 Plllpvkenillveankkkekeeklneqevleeeekeieela 68 
                 P+   ++++ +l  +++++++++++++q+ ++++     +l+
  KHJ30016.1 287 PIYQVQQSQQQLHTQSSSQQQQSQSSRQQQQQQQ-----SLS 323
                 4444444555555444433333333333332222.....222 PP

>> DUF775  Protein of unknown function (DUF775)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   6.6   0.00013     0.082     115     150 ..       5      41 ..       1     111 [. 0.66
   2 ?    1.1   9.2       0.4   2.5e+02     114     147 ..     288     321 ..     281     350 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00013
      DUF775 115 eqvaaqlaelkaeqsassssaasssk.seessaavtk 150
                 +q ++q ++++++q++++++++++++ ++++++++++
  KHJ30016.1   5 SQQQQQQQQQQQQQQQQQQQQQQQQQqQQQQQQQQVQ 41 
                 4444444333333333333333322202222333333 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.4
      DUF775 114 leqvaaqlaelkaeqsassssaassskseessaa 147
                 + qv++  ++l++++s+++++++ss+++++++++
  KHJ30016.1 288 IYQVQQSQQQLHTQSSSQQQQSQSSRQQQQQQQS 321
                 4455555555555544444443333333332222 PP

>> DUF4770  Domain of unknown function (DUF4770)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   8.2   0.00048       0.3      81     115 ..       6      39 ..       1      87 [. 0.54
   2 ?    2.8   7.3       0.2   1.3e+02      84     124 ..     293     327 ..     280     372 .. 0.44

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00048
     DUF4770  81 kkerkkqekkkkkrlklkkkkekkrkekekkkkkn 115
                 ++++++q+++++++++++++++++++++++++ ++
  KHJ30016.1   6 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ-QQ 39 
                 22333222222222222222222222222211.11 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.2
     DUF4770  84 rkkqekkkkkrlklkkkkekkrkekekkkkknkkklspYfe 124
                 +++q+  ++++++++++++++r++++++++ ++++     +
  KHJ30016.1 293 QSQQQL-HTQSSSQQQQSQSSRQQQQQQQSLSQSQ-----T 327
                 222222.1222222222222222222222222111.....1 PP

>> GNAT_acetyltr_2  GNAT acetyltransferase 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   7.1    0.0016      0.99     130     194 ..       6      68 ..       1      71 [. 0.54
   2 ?    3.8   2.9     0.054        33     111     170 ..     278     338 ..     271     352 .. 0.50

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0016
  GNAT_acetyltr_2 130 sleeeeekeeeeeeekeeeeeklsleeeklkprkelpplllklseekpekldylgvsfGltseLl 194
                      + ++++++++++++++++++++++++++++++++++++++ + +++++ +++ lg  fG +  L 
       KHJ30016.1   6 Q-QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQVPDQRRNQPAYDMN-LGGHFGASAALS 68 
                      2.22233333333333344445555566666666666666666666666665.899999998886 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.054
  GNAT_acetyltr_2 111 GYGsralellekyyegklssleeeeekeeeeeeekeeeee.klsleeeklkprkelpplll 170
                      GY+s   ++ +  ++++ ++l+ +++++++++++++++++ ++sl+++++ ++++ +p+  
       KHJ30016.1 278 GYASIQPQQPIYQVQQSQQQLHTQSSSQQQQSQSSRQQQQqQQSLSQSQTPQQSRQAPMGH 338
                      4444443443334444444444444444444444444333244555555555555555554 PP

>> VIT1  VIT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.6    0.0015      0.94      61      94 ..      11      48 ..       2     189 .. 0.71
   2 ?    2.2   3.2      0.23   1.4e+02      52      94 ..     278     326 ..     275     373 .. 0.61

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0015
        VIT1 61 dlekaerkreeee...leedpe.egeaeelaeilearg 94
                ++ ++++++++++    +++++ ++++++++++  +r 
  KHJ30016.1 11 QQQQQQQQQQQQQqqqQQQQQQqQQQQQQVQQVPDQRR 48
                33333332222220002222222444677888887773 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.23
        VIT1  52 eYlsvkserdlekaerkreeeeleedpe.eg.....eaeelaeilearg 94 
                 +Y s + ++ +++ ++++++ + + +++ ++     ++++ ++ l++ +
  KHJ30016.1 278 GYASIQPQQPIYQVQQSQQQLHTQSSSQqQQsqssrQQQQQQQSLSQSQ 326
                 7888888888888888887777666664333111111122222222222 PP

>> DUF5308  Family of unknown function (DUF5308)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   1.6   5.6e-05     0.035      82     119 ..       7      44 ..       1     148 [. 0.62
   2 ?   -1.9  12.1       5.7   3.5e+03      92     131 ..     296     335 ..     273     351 .. 0.43

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5.6e-05
     DUF5308  82 pesaasssadssrekktesaeaeeqdqlagaetssags 119
                 ++++++++++++++++++++++++q+q++ +++ +++ 
  KHJ30016.1   7 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQVP 44 
                 22222222222222222222222222222222222222 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 5.7
     DUF5308  92 ssrekktesaeaeeqdqlagaetssagsaaaeeeeedaap 131
                 ++ +++++s+++++q++ + ++++++ s++++ +++++ap
  KHJ30016.1 296 QQLHTQSSSQQQQSQSSRQQQQQQQSLSQSQTPQQSRQAP 335
                 1111111111111111111111112222222222234444 PP

>> Spt20  Spt20 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3  41.3    0.0025       1.6     100     143 ..       6      47 ..       1      72 [. 0.44
   2 ?    3.6  22.8     0.069        43     110     149 ..     293     332 ..     278     373 .. 0.50

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0025
       Spt20 100 qsqktqdqkqsqqnqqqqqqqqqqqqqqqqqqeqqqqqnekdst 143
                 q+q++  q+q+qq+qqqqqqqqqqqqqqqqqq+qqq+q+ +d++
  KHJ30016.1   6 QQQQQ--QQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQVPDQR 47 
                 22222..2222222222222222222222222222222222222 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.069
       Spt20 110 sqqnqqqqqqqqqqqqqqqqqqeqqqqqnekdsttteeke 149
                 ++q+q  +q+++qqqq q++ q+qqqqq+  +s+t +++ 
  KHJ30016.1 293 QSQQQLHTQSSSQQQQSQSSRQQQQQQQSLSQSQTPQQSR 332
                 1122222222222222222222222222222222222111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      5383  (0.30024); expected 358.6 (0.02)
Passed bias filter:                     1452  (0.0809861); expected 358.6 (0.02)
Passed Vit filter:                       605  (0.0337442); expected 17.9 (0.001)
Passed Fwd filter:                       292  (0.0162865); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              29  [number of targets reported over threshold]
# CPU time: 1.36u 0.37s 00:00:01.73 Elapsed: 00:00:00.52
# Mc/sec: 2178.36
//
Query:       KHJ30017.1  [L=358]
Description: putative amidohydrolase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.6e-25   89.8   0.0    1.2e-24   87.6   0.0    1.9  1  Amidohydro_2  Amidohydrolase


Domain annotation for each model (and alignments):
>> Amidohydro_2  Amidohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.6   0.0   6.6e-29   1.2e-24     109     291 .]     153     356 ..      15     356 .. 0.77

  Alignments for each domain:
  == domain 1  score: 87.6 bits;  conditional E-value: 6.6e-29
                   TTECEEEEESSTTTCCTTTCGGHHHHHHHHHHHT-EEEEE....CHHHCHHHHHHHHHHHHHHHCCHHHHCTT.......SEEEESGGGTT...... CS
  Amidohydro_2 109 lgfkGvrlnphvggddllgdrldrpifealeelglpvdihtGpspewlfggpqettraiqplllsgvarkfPn.......lkivlaHgGgp...... 192
                    +++G+r  +h  +     ++++  +++ l++ ++++d+            +q++   +q++++  ++++  +       + i+++H+++p      
    KHJ30017.1 153 SKIRGFRYLVHDKPRGVMLEDNFIQGLKWLGRNKFVFDLG----------IDQHRRGKWQLEEAITMIERAHDgvnpedrVHIIINHLCKPnlsiyn 239
                   3577788777777777777777799999999999999999..........55********************************************* PP

                   .....TTCHHHHHHHHHHHHHCCEEECCGHHH.......SSEEECCHHCHHHHHHHHHHH-GGGEEEE--BTSTTSTSCTTHHHHCHHHHH...... CS
  Amidohydro_2 193 .....serlraalellarrpnvyvklsglyte.......llyfdspladppalarlieavgpdrilfGsDyPhptleaepealalldlval...... 271
                        + ++r+a+  l+++ n+y+klsg ++e       ++  d  +a++p+la  ++++gp ri+fGsD+P++t +  +++ +++  v++      
    KHJ30017.1 240 qsdpvFIAWRTAIFKLSKFSNTYLKLSGGFSEmsdtlktATVNDIFDAMQPYLAVTLATFGPSRIMFGSDWPVCTVGVVDAWRKWFLIVQRfcslas 336
                   *************************************997777888999***************************888888888877777****** PP

                   SSHHHHHHHHTHHHHHHCTB CS
  Amidohydro_2 272 lsdeerekilggNAarlygl 291
                   l++ee + i++g+A + ygl
    KHJ30017.1 337 LTPEEMRMIFSGTAIKAYGL 356
                   ******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       279  (0.0155614); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2761.05
//
Query:       KHJ30018.1  [L=182]
Description: putative effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.093   12.6   0.0       0.12   12.2   0.0    1.1  1  YrpD      Domain of unknown function, YrpD


Domain annotation for each model (and alignments):
>> YrpD  Domain of unknown function, YrpD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   6.9e-06      0.12      57     130 ..      80     154 ..      64     163 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6.9e-06
                 ..-EEEEEEEEE..TTTTEEEEEEEETTB---..EEEE-HHHHSTT--B-TT-EEEEEEEEEETTEE....EEEEEEE CS
        YrpD  57 vsveaDiGlqYsyaatynkWkpllkvgsktkengtylegkdevtykkGfkpGsdleltiyknlngnt....rltllGt 130
                 v + aDi +     ++y+k +p+ k g+  k+   yl   +   y+  fkpG+ ++l++y +    t    r +++G 
  KHJ30018.1  80 VYTRADIAFALGRLSQYMK-EPVKKHGQALKKLMRYLRFTS--DYRLCFKPGESVNLVVYSDADWATdkvdRKSISGG 154
                 5678888888887778776.799999999999999998766..5999*************988766666677777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1487.28
//
Query:       KHJ30019.1  [L=205]
Description: putative ras-like protein rab7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-56  189.3   0.0      4e-56  189.1   0.0    1.0  1  Ras             Ras family
    6.9e-32  110.2   0.0    9.7e-32  109.7   0.0    1.2  1  Roc             Ras of Complex, Roc, domain of DAPkinase
    9.9e-13   47.9   0.0    1.1e-12   47.7   0.0    1.0  1  Arf             ADP-ribosylation factor family
      1e-07   32.0   0.0    1.7e-07   31.3   0.0    1.4  1  MMR_HSR1        50S ribosome-binding GTPase
    4.8e-06   26.1   0.0    5.9e-06   25.8   0.0    1.2  1  Gtr1_RagA       Gtr1/RagA G protein conserved region
    2.1e-05   24.2   0.0    0.00078   19.0   0.0    2.3  1  GTP_EFTU        Elongation factor Tu GTP binding domain
    0.00048   20.1   0.2     0.0048   16.8   0.1    2.2  3  RsgA_GTPase     RsgA GTPase
      0.007   16.4   0.0      0.015   15.3   0.0    1.7  1  AAA_5           AAA domain (dynein-related subfamily)
     0.0076   16.1   0.2       0.22   11.2   0.0    2.1  2  ATP_bind_1      Conserved hypothetical ATP binding protein
     0.0094   16.2   0.0      0.016   15.5   0.0    1.5  1  AAA_22          AAA domain
     0.0095   15.4   0.0      0.012   15.1   0.0    1.2  1  SRPRB           Signal recognition particle receptor beta sub
  ------ inclusion threshold ------
      0.013   15.3   0.1       0.12   12.1   0.0    2.1  2  PduV-EutP       Ethanolamine utilisation - propanediol utilis
      0.013   15.0   0.0      0.029   13.9   0.0    1.5  1  cobW            CobW/HypB/UreG, nucleotide-binding domain
      0.015   15.7   0.0      0.034   14.5   0.0    1.6  1  AAA_16          AAA ATPase domain
      0.022   14.5   0.0      0.038   13.7   0.0    1.4  1  AAA_24          AAA domain
      0.026   13.8   0.1      0.061   12.6   0.0    1.7  2  Septin          Septin
      0.026   14.0   0.1      0.045   13.3   0.1    1.3  1  AAA_7           P-loop containing dynein motor region
      0.071   13.4   0.0       0.11   12.8   0.0    1.4  1  Glyco_hydro_75  Fungal chitosanase of glycosyl hydrolase grou
      0.092   12.6   0.5       0.13   12.1   0.1    1.4  2  ATPase_2        ATPase domain predominantly from Archaea
      0.092   11.9   0.1        0.3   10.2   0.0    1.8  2  NB-ARC          NB-ARC domain
       0.12   11.8   0.0       0.18   11.2   0.0    1.3  1  TniB            Bacterial TniB protein
       0.13   12.2   0.0       0.19   11.6   0.0    1.3  1  NACHT           NACHT domain
       0.16   11.9   0.0       0.23   11.3   0.0    1.3  1  NTPase_1        NTPase


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.1   0.0   5.1e-59     4e-56       1     160 [.      10     175 ..      10     177 .. 0.97

  Alignments for each domain:
  == domain 1  score: 189.1 bits;  conditional E-value: 5.1e-59
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 K++++Gds+vGKtsl++++v++kF+ +y++Tig+df+tke+ vd++ v++++wDTAGqe+f+sl  ++yr+a++++lvyd+++++sf+++++w +e+  
  KHJ30019.1  10 KVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLI 108
                 99***********************************************************************************************99 PP

                 HST....TTSEEEEEEETTTGGG.G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras 100 vae....envpivLvGnKvDlee.kravsteegeelakelg.lkfletSAktnenveeafeellrei 160
                 +a+    +n+p+v++GnK+D+ee kr++s +++ ++++++g ++++etSAk++ nve+afe ++r++
  KHJ30019.1 109 QASprdpDNFPFVVLGNKIDVEEnKRVISPKRAMTFCESKGkIPYFETSAKEALNVEQAFEVIARNA 175
                 999999999************9768999************99*********************9987 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.7   0.0   1.2e-34   9.7e-32       1     119 [.      10     128 ..      10     129 .. 0.86

  Alignments for each domain:
  == domain 1  score: 109.7 bits;  conditional E-value: 1.2e-34
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 Kv+++GdsgvGKtsl++++v++kfs ++k+tig+dfltkev  +     d+  + v++++WDtaGqerf+sl   ++r+a++++lvyd   s+s+++l+
  KHJ30019.1  10 KVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVL-V-----DD--RLVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDvnnSKSFDTLD 100
                 9**************************************983.2.....23..4699*******************************8666678999* PP

                 HHHHHHHHHCS.....SS-EEEEEE-TT CS
         Roc  97 eWlkelkkvag.....kspvilvgnkiD 119
                 +W +e+  +a+     + p++++gnkiD
  KHJ30019.1 101 SWRDEFLIQASprdpdNFPFVVLGNKID 128
                 ***998655432222234899******9 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.7   0.0   1.5e-15   1.1e-12      14     172 ..       8     172 ..       1     175 [. 0.79

  Alignments for each domain:
  == domain 1  score: 47.7 bits;  conditional E-value: 1.5e-15
                 EEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSS..EEEEEEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHH CS
         Arf  14 elrilllGLDnaGKtTilkklkleelvt.tvPTig..fnveelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkal 107
                  l++++lG  + GKt +++++ +++++   + Tig  f ++e+ +  + +++++wD  Gqe+  +l   +++  d  + v D+++++ +++  +  +++
  KHJ30019.1   8 LLKVIILGDSGVGKTSLMNQYVNKKFSAsYKATIGadFLTKEVLVddRLVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEF 106
                 479********************999864789999334567776644679**********************************999988887777766 PP

                 CTSGCCT...TSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHHHHHH CS
         Arf 108 leeeelk...evallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewls 172
                 l +   +   + +++vl+NK+D++e       +++++  e  +k k+  +++sa +  ++++++e ++
  KHJ30019.1 107 LIQASPRdpdNFPFVVLGNKIDVEENKRVISPKRAMTFCE--SKGKIPYFETSAKEALNVEQAFEVIA 172
                 655554434499************9877665555555554..45677778888888888888887776 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.0   2.2e-10   1.7e-07       1      98 [.      10     100 ..      10     126 .. 0.71

  Alignments for each domain:
  == domain 1  score: 31.3 bits;  conditional E-value: 2.2e-10
                 EEEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETT..EEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT.TTCSHHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkg..keielvDtpGliegaseekglgkaflaleeadlillvvdas.eeklkpldee 96 
                 +v+i+G + vGK++L+n+ +++k  +s k+    d  +++v +++    ++l+Dt+G  e   + ++lg af +   ad  +lv d++ +++++ l   
  KHJ30019.1  10 KVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDrlVTMQLWDTAG-QE---RFQSLGVAFYR--GADCCVLVYDVNnSKSFDTL--- 99 
                 699*******************9988888888888877777655545789*******.54...44489999996..57777777776632233333... PP

                 HH CS
    MMR_HSR1  97 le 98 
                   
  KHJ30019.1 100 -D 100
                 .3 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   7.6e-09   5.9e-06       1     128 [.      10     133 ..      10     170 .. 0.74

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 7.6e-09
   Gtr1_RagA   1 kvLLmGksgsGKts.mrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletl 98 
                 kv+++G sg GKts m++ + ++++a    ++ga   +++  v   + +t++lwD  Gqe+f+   +   +     ++ vl+   Dv++++  ++l+++
  KHJ30019.1  10 KVIILGDSGVGKTSlMNQYVNKKFSASYKATIGADFLTKEVLV-DDRLVTMQLWDTAGQERFQSLGVAFYR---GADCCVLV--YDVNNSKSFDTLDSW 102
                 89***********977899***********9999888777777.57888*************988644433...34555555..599888877777777 PP

   Gtr1_RagA  99 ke.ilealrqysp.eakvfvlihKmDliqede 128
                 ++  l +++  +p +  + vl +K+D  ++ +
  KHJ30019.1 103 RDeFLIQASPRDPdNFPFVVLGNKIDVEEN-K 133
                 642444455455425677788899997643.3 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0     1e-06   0.00078      70     190 ..      57     173 ..       6     177 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1e-06
                 EEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTBSTHHHHHHHH.....HHHHT...TTEEEEEEESCGSTHHHHHHHHHHHHHHHHHHHHHHHHH CS
    GTP_EFTU  70 ylinliDtPGHvdFskevirglrvlDgavlvvdaveGvepqteevlr.....lalke...gvpiivfiNKmDrlkaelkeiveevkqklsrkeekleky 160
                  +++l Dt G + F++   + +r +D++vlv d+++     t   +r     +a+ +   + p++v+ NK+D  +++   +++ +  ++          
  KHJ30019.1  57 VTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRdefliQASPRdpdNFPFVVLGNKIDVEENKRVISPKRAM-TF---------C 145
                 567899*****************************996666655554222226665412256699999****87666555555555.45.........2 PP

                 HHTTTTTEEEEEEBTTTTBTHHHHHHHHHH CS
    GTP_EFTU 161 gekgekevpvvfgSalkgegvktllealve 190
                 + kg  ++p + +Sa+++ +v++ +e++ +
  KHJ30019.1 146 ESKG--KIPYFETSAKEALNVEQAFEVIAR 173
                 3333..699999999999999988888765 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   6.2e-06    0.0048     102     122 ..      11      31 ..       5      50 .. 0.86
   2 ?   -1.5   0.0       2.7   2.1e+03      70      96 ..      76     102 ..      45     110 .. 0.75
   3 ?    0.5   0.0      0.64     5e+02      46      92 ..     117     166 ..      80     177 .. 0.61

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 6.2e-06
                  EEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpe 122
                  ++++G SGvGK++L+n+ +++
   KHJ30019.1  11 VIILGDSGVGKTSLMNQYVNK 31 
                  6899************99876 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 2.7
                  HHHHHTTSEEEE--TTTHTTHHHHHHH CS
  RsgA_GTPase  70 eelealgyevllvsaktkegleelkel 96 
                  + ++ +++ vl+ ++++++++++l ++
   KHJ30019.1  76 AFYRGADCCVLVYDVNNSKSFDTLDSW 102
                  567888888888899988888888776 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.64
                  T-EEEEEEE-GGG--HHH..HHHHHHHHHHHTT.SEEEE--TTTHTTHHH CS
  RsgA_GTPase  46 giepvivlnKiDlleeee..eleelkeelealg.yevllvsaktkeglee 92 
                  + + v++ nKiD+ e+++  + ++ ++  e+ g ++ + +sak+  ++e+
   KHJ30019.1 117 NFPFVVLGNKIDVEENKRviSPKRAMTFCESKGkIPYFETSAKEALNVEQ 166
                  44556666999998888855333334444433325556666666555555 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.9e-05     0.015       2      49 ..      11      65 ..      10     139 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.9e-05
                EEEE--SSSSHHHHHHHGGGGB.S--EEEEE--TT--HHHHH--B--........ CS
       AAA_5  2 vlLvGppGtgKselaerlaaal.nreveyvqltrdtteedlkgrreik......n 49
                v+++G++G+gK++l+ ++      +++    + +++t+e l+  r ++       
  KHJ30019.1 11 VIILGDSGVGKTSLMNQYVNKKfSASYKATIGADFLTKEVLVDDRLVTmqlwdtA 65
                89***********9988765555****************9999998875555443 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1     0.081        63       1      17 [.      13      29 ..      13      41 .. 0.83
   2 !   11.2   0.0   0.00029      0.22      71     188 ..      42     153 ..      36     185 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.081
  ATP_bind_1  1 vvGpaGsGKttfvgals 17
                ++G  G+GKt+++++ +
  KHJ30019.1 13 ILGDSGVGKTSLMNQYV 29
                6899********99865 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00029
  ATP_bind_1  71 aleflresldwldeelekeeddyllfDtPGQielfthseslakiveeLesefalvvvyLvDsqrltd...ptkfisgllsalsamlrlelPhvvvlnkf 166
                  ++fl++++  +d++l        l Dt GQ ++  +  +          ++a ++v + D++ +++     ++ ++ l+  s     + P+vv  nk+
  KHJ30019.1  42 GADFLTKEV-LVDDRL----VTMQLWDTAGQERFQSLGVAFY--------RGADCCVLVYDVNNSKSfdtLDSWRDEFLIQASPRDPDNFPFVVLGNKI 127
                 556666666.556666....57889********999988888........9************999987677899999999999999************ PP

  ATP_bind_1 167 Dllkek....lekeleffedvealsl 188
                 D+ ++k     ++++ f e   ++ +
  KHJ30019.1 128 DVEENKrvisPKRAMTFCESKGKIPY 153
                 **775555544444444443333333 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   2.1e-05     0.016       9      38 ..      12      52 ..       9     107 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.1e-05
      AAA_22  9 vvtGesGtGKTtllrrlleqldeeakaee...........e 38
                ++ G sG+GKT l++++++++  +++ ++            
  KHJ30019.1 12 IILGDSGVGKTSLMNQYVNKKFSASYKATigadfltkevlV 52
                799***************99855555444566665555554 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.5e-05     0.012       5      63 ..      10      71 ..       6     133 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.5e-05
                EEEEE-STTSSHHHHHHHHHHSS---B---S..S-EEETTG....GGTT-SEEEETT-GCCS CS
       SRPRB  5 avllvGlsdsGKTslftrLttdsvkktvtSq..essaalkv.ksekgskltliDfPGheklr 63
                +v+++G s  GKTsl+++  ++++  ++ +   +  ++++v  +++  +++l D  G+e+++
  KHJ30019.1 10 KVIILGDSGVGKTSLMNQYVNKKFSASYKATigADFLTKEVlVDDRLVTMQLWDTAGQERFQ 71
                69********************9999987765555566666577788899999999999986 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00015      0.12       3      35 ..      10      44 ..       8      53 .. 0.76
   2 ?    0.6   0.0      0.54   4.2e+02      98     141 ..     126     171 ..     117     173 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00015
   PduV-EutP  3 killiGkvgsGKttLtqalkgeel..kYkktqaie 35
                k++++G +g+GKt+L+++  ++++  +Yk t   +
  KHJ30019.1 10 KVIILGDSGVGKTSLMNQYVNKKFsaSYKATIGAD 44
                89*************98877765522688776555 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.54
   PduV-EutP  98 kidlaedeeni..eaveelLksaGaekifevsavekegieellkyl 141
                 kid+ e++  i  + + ++ +s G    fe+sa e  ++e+ ++++
  KHJ30019.1 126 KIDVEENKRVIspKRAMTFCESKGKIPYFETSAKEALNVEQAFEVI 171
                 7888866666622344455677777777999999999998877766 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   3.8e-05     0.029       3      69 ..      11      90 ..       9     111 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.8e-05
                EEEEESTTCCHHHHHHHHH.CT--SS-EEEEESS-..SSCHCCCCCC.........HCCCT......EEEETTTTECCHCTT-H CS
        cobW  3 tvltGflGsGKTtLlnhll.enraglklavivNef..gevsiDaell.........retgve.....ivelenGciCctlredl 69
                +++ G  G GKT+L+n+++ ++ +    a i  +f  +ev +D +l+         +    e      v +  G  Cc l  d+
  KHJ30019.1 11 VIILGDSGVGKTSLMNQYVnKKFSASYKATIGADFltKEVLVDDRLVtmqlwdtagQ----ErfqslGVAFYRGADCCVLVYDV 90
                6889999************54445555688999993345889*99995555543321....25555588889999999876655 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   4.3e-05     0.034      27      45 ..      11      29 ..       2     118 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 4.3e-05
      AAA_16 27 vllsGesGvGKsslvrell 45
                v++ G+sGvGK+sl+++  
  KHJ30019.1 11 VIILGDSGVGKTSLMNQYV 29
                89*************7654 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   4.8e-05     0.038       4      23 ..      10      30 ..       8      64 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 4.8e-05
      AAA_24  4 kiliyGpsgiGKTtlakel.g 23
                k++i G+sg+GKT+l++++  
  KHJ30019.1 10 KVIILGDSGVGKTSLMNQYvN 30
                89***************9942 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   7.8e-05     0.061       4      32 ..       8      36 ..       5      65 .. 0.79
   2 ?   -2.6   0.0       3.4   2.7e+03     193     216 ..     109     132 ..      89     140 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 7.8e-05
                EEEEEEEEBTTSSCCCCCCTTSSSS---- CS
      Septin  4 eftlmvvGesglGkttlintlfetdliee 32
                 + +++ G+sg+Gkt+l+n  ++++   +
  KHJ30019.1  8 LLKVIILGDSGVGKTSLMNQYVNKKFSAS 36
                5789****************999987766 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 3.4
                 HHHHHHHHC-SEEB-SSSSEEEES CS
      Septin 193 elseklkeslPfaivgsneliekk 216
                 ++s +   ++Pf ++g +  +e++
  KHJ30019.1 109 QASPRDPDNFPFVVLGNKIDVEEN 132
                 444444456677777776666655 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   5.8e-05     0.045      35      62 ..      10      37 ..       3      47 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 5.8e-05
       AAA_7 35 pvllvGptGtGKtviikdllkkldkeky 62
                +v++ G++G+GKt++++++++k  + +y
  KHJ30019.1 10 KVIILGDSGVGKTSLMNQYVNKKFSASY 37
                6899**************7776554555 PP

>> Glyco_hydro_75  Fungal chitosanase of glycosyl hydrolase group 75
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   0.00014      0.11      14      66 ..      83     139 ..      63     158 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00014
  Glyco_hydro_75  14 rCksspdtqpetsfkdlvksy......giedldaeehpYvVlgnegksfdpkeagvepl 66 
                      C    d++++ sf d+++s+      + +  d++++p+vVlgn+   ++++++ + p 
      KHJ30019.1  83 CCVLVYDVNNSKSF-DTLDSWrdefliQASPRDPDNFPFVVLGNKI-DVEENKRVISPK 139
                     45677788888999.5899997766666888999*********964.444555555444 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   0.00017      0.13      23      49 ..      11      37 ..       3      51 .. 0.85
   2 ?   -3.2   0.1       8.3   6.5e+03      89      91 ..     156     158 ..     122     182 .. 0.47

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00017
    ATPase_2 23 yfiYGpegsGKtaLlkeiienledkdk 49
                + i G  g+GKt+L+++ ++++ + ++
  KHJ30019.1 11 VIILGDSGVGKTSLMNQYVNKKFSASY 37
                5799****************9955554 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 8.3
    ATPase_2  89 ael 91 
                 +++
  KHJ30019.1 156 TSA 158
                 222 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00038       0.3      23      43 ..      11      31 ..       2      65 .. 0.85
   2 ?   -1.1   0.0       1.1   8.4e+02     130     178 ..     131     181 ..     126     187 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00038
                EEEEESTTSSHHHHHHHHCCS CS
      NB-ARC 23 valvGmgGvGKttlakqilnk 43
                v + G  GvGKt l++q +nk
  KHJ30019.1 11 VIILGDSGVGKTSLMNQYVNK 31
                7899*************9988 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1.1
                 TTSEEEEEESBCCCCCCS-S-..EEEEEESS--HHHHHHHHHHCCTS-GGC CS
      NB-ARC 130 nrlrvllTTRdeevanavsat..sekievelLekdeawellenkvfekkle 178
                 +  rv+   R +  +++ ++    e+   e L+ ++a+e++   + +++ +
  KHJ30019.1 131 ENKRVISPKRAMTFCESKGKIpyFETSAKEALNVEQAFEVIARNALAQEES 181
                 556677777777777777776644556677888888888887777766655 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00023      0.18      36      61 ..       9      34 ..       2      71 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00023
        TniB 36 pnlllvGdsnnGKtmivekFarlhpp 61
                 +++++Gds +GKt++++++ +++ +
  KHJ30019.1  9 LKVIILGDSGVGKTSLMNQYVNKKFS 34
                5689****************988744 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00024      0.19       3      19 ..      11      27 ..       9      38 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00024
                EEEEC-TTTCHHHHHHH CS
       NACHT  3 vilqGeaGsGKTtLlqk 19
                vi+ G++G+GKT L+ +
  KHJ30019.1 11 VIILGDSGVGKTSLMNQ 27
                89************987 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0    0.0003      0.23       1      57 [.      10      69 ..      10      99 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.0003
                EEEEE--TTSSHHHHHHHHHHHH...GGGEE.E..EEEEEE-------EEEEEET.T--E CS
    NTPase_1  1 kvfiTGppGvGKtTlvkkvlellkssgvkvg.G..fyteevreggrrigFkivdlasgee 57
                kv+i G +GvGKt l+++ +++  s  +k + G  f+t+ev  ++r +  ++ d a +e+
  KHJ30019.1 10 KVIILGDSGVGKTSLMNQYVNKKFSASYKATiGadFLTKEVLVDDRLVTMQLWDTAGQER 69
                58999***********998887666666543244599****9999999999999854444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 1627.40
//
Query:       KHJ30020.1  [L=86]
Description: putative nadh-ubiquinone oxidoreductase b18 subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-29  101.3   3.1      2e-29  101.1   3.1    1.1  1  NDUF_B7   NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)


Domain annotation for each model (and alignments):
>> NDUF_B7  NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.1   3.1   1.1e-33     2e-29       2      63 .]      12      73 ..      11      73 .. 0.98

  Alignments for each domain:
  == domain 1  score: 101.1 bits;  conditional E-value: 1.1e-33
     NDUF_B7  2 atqeemeaaklplkeRDyCAhlLiplnkCrrenfplpwkCehekhayekCqyedyvrRmkel 63
                at+eem++a+lpl++RD CA lLipln+Cr ++++lpwkCe+e+h+yekCqy+++++R++++
  KHJ30020.1 12 ATREEMSEARLPLAYRDSCAGLLIPLNRCRVKEYYLPWKCENERHSYEKCQYDEFLQRVAKM 73
                8**********************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.27s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 634.51
//
Query:       KHJ30021.1  [L=286]
Description: putative egh16h1-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-67  226.0  10.6    6.2e-67  225.6  10.6    1.2  1  Egh16-like  Egh16-like virulence factor


Domain annotation for each model (and alignments):
>> Egh16-like  Egh16-like virulence factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  225.6  10.6   3.5e-71   6.2e-67       2     183 .]      19     253 ..      18     253 .. 0.99

  Alignments for each domain:
  == domain 1  score: 225.6 bits;  conditional E-value: 3.5e-71
  Egh16-like   2 aHgvitkvtGangvngpglgvadgtprdgtsrasgsqaDttvfrdkeikkkkasglGrtlgsgkvniaaeiaklm........................ 76 
                 aHg+i +v+Gangv++p+l+vadgtprd++s+a+gs+aDt+++r++e++++ka++lGrt+g+g+vn++++++++m                        
  KHJ30021.1  19 AHGLIDSVKGANGVDMPALSVADGTPRDCASPACGSEADTSIIRSRELGTNKATALGRTQGGGPVNASKMVSMFMngdggnktsdkqareihaanvlrr 117
                 9************************************************************************************************** PP

  Egh16-like  77 ...........................agaesglptvsaggtltmtvhqvnqDGaGpltckiDststgtdakalqkaevtknvpGk..gglsaakntdf 146
                                            ag++sg+pt++++gt++mt+hqvnqDGaGpl++++D ts+g+d+ka+qka+vtknvpG   gglsaa  +df
  KHJ30021.1 118 slgvraenggtktpkgtvetgvkaaagAGSSSGMPTCAEDGTVKMTFHQVNQDGAGPLSAMVDGTSGGMDPKAFQKATVTKNVPGIgiGGLSAAAVMDF 216
                 *************************99999******************************************************9999*********** PP

  Egh16-like 147 plkvqlpagltCtGtvggaknvCivRceNaakaGPFG 183
                 p+++++p+g+tC+++vgg++nvC+++++N+a+aGPFG
  KHJ30021.1 217 PVEAKMPDGMTCDASVGGVQNVCVMKLQNKAAAGPFG 253
                 ************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       290  (0.0161749); expected 358.6 (0.02)
Passed bias filter:                      204  (0.0113782); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 2259.46
//
Query:       KHJ30022.1  [L=194]
Description: putative effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       602  (0.0335769); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1574.87
//
Query:       KHJ30023.1  [L=102]
Description: hypothetical protein EV44_g0244 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       165  (0.00920297); expected 358.6 (0.02)
Passed bias filter:                      110  (0.00613531); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 753.76
//
Query:       KHJ30024.1  [L=373]
Description: hypothetical protein EV44_g4105 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.12   12.6   0.0       0.43   10.8   0.0    1.9  2  APS-reductase_C  Adenosine-5'-phosphosulfate reductase beta s


Domain annotation for each model (and alignments):
>> APS-reductase_C  Adenosine-5'-phosphosulfate reductase beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.44   7.9e+03       6      21 ..      90     105 ..      89     122 .. 0.63
   2 ?   10.8   0.0   2.4e-05      0.43      20      54 ..     193     227 ..     181     239 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.44
                      TT--TT-EEEEEE-SS CS
  APS-reductase_C   6 DfvPlGasvvplrgee 21 
                      Df Pl + +   r  +
       KHJ30024.1  90 DFPPLDSTISHKRTAD 105
                      5666666655555443 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 2.4e-05
                      SSEEEEEEE-TTS-EEEEEEE--SS-TT---TTTT CS
  APS-reductase_C  20 eekimWtvkfRnGkvkrfkfpirTtpeGsaqplad 54 
                      +++ +W  k  nG++k f   irT p  ++ p+++
       KHJ30024.1 193 KSNSSWAAKAANGNIKSFNNSIRTLPARHTPPQGQ 227
                      34489********************9877766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       520  (0.0290033); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2952.04
//
Query:       KHJ30025.1  [L=151]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       249  (0.0138881); expected 358.6 (0.02)
Passed bias filter:                      235  (0.0131073); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 1078.60
//
Query:       KHJ30026.1  [L=163]
Description: hypothetical protein EV44_g3344 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.041   14.1   0.0      0.071   13.4   0.0    1.4  1  Retrotrans_gag  Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   3.9e-06     0.071      13      73 ..      71     132 ..      68     154 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.9e-06
  Retrotrans_gag  13 swlkslvarsida.sesWkdlkkaflktflpserkdqleeelsslrQgtesvreYvtrfktl 73 
                     ++++ l++ s++  ++s +++ +a++++  ++   +++++   +++Q+++++++++t+f+  
      KHJ30026.1  71 THFRCLEDPSVRPkITSISKFLDALKRESGDPGLVYKATRAVDEMSQKNMTFHDFITKFQDN 132
                     6677777777777788999999***********9*************************643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1138.26
//
Query:       KHJ30027.1  [L=390]
Description: hypothetical protein EV44_g3652 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       819  (0.0456802); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.21s 00:00:00.74 Elapsed: 00:00:00.39
# Mc/sec: 2980.98
//
Query:       KHJ30028.1  [L=199]
Description: hypothetical protein EV44_g1726 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.061   13.4   0.0       0.11   12.6   0.0    1.4  1  ARL2_Bind_BART  The ARF-like 2 binding protein BART


Domain annotation for each model (and alignments):
>> ARL2_Bind_BART  The ARF-like 2 binding protein BART
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   6.2e-06      0.11      52     102 ..     124     175 ..     121     189 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 6.2e-06
                     HHHHHHHHH.HHTT-SSS--THHHHH....SS-GGSSHHHHHHHHGGG-HHH CS
  ARL2_Bind_BART  52 klveklles.lleeigismeeflealekslsekkevakkvfeqllaadDFea 102
                     +lv+++l++  l +i  s + ++++l+k+l++ ++++k++f+ l+++++Fe+
      KHJ30028.1 124 ELVDTELSKpSLPRIPNSRQWLYNHLSKALENAFQKDKGIFDELMEFNNFED 175
                     6899999999999999999999****99999999****************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1626.22
//
Query:       KHJ30029.1  [L=502]
Description: putative not2 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-32  111.9   0.9    5.9e-32  110.5   0.9    1.8  1  NOT2_3_5  NOT2 / NOT3 / NOT5 family


Domain annotation for each model (and alignments):
>> NOT2_3_5  NOT2 / NOT3 / NOT5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.5   0.9   3.3e-36   5.9e-32       4     131 .]     371     490 ..     368     490 .. 0.91

  Alignments for each domain:
  == domain 1  score: 110.5 bits;  conditional E-value: 3.3e-36
    NOT2_3_5   4 lnspdsedaekprqyepklphptsisypqeplyeklesakklekldedtLFyiFYysqgtleqllAakeLkkrsWryhkelktWflreekeepkektee 102
                 + s + +d+ +p   + klp++    y+ ++     +   k+ ++++++L ++FY+s+g+l+q++Aa+eL++r+Wryhk+l++W++++e++ p+++ + 
  KHJ30029.1 371 IYSLWDNDPPRPVLSSYKLPEC----YTVSN---VAQLDTKMANFNDEALIFMFYSSPGDLQQVMAAQELHNRNWRYHKKLQLWLTKDEMMVPQSTGNG 462
                 67889999999988888*****....96665...355667************************************************999******** PP

    NOT2_3_5 103 yekgsYkyFDyetWlkrrkkdfkleyekL 131
                 +e+g Y++FD ++W+++r ++ +l y++L
  KHJ30029.1 463 TERGYYIFFDIKNWQRER-RELTLVYDDL 490
                 **********88*****9.9****99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       776  (0.0432818); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3742.22
//
Query:       KHJ30030.1  [L=255]
Description: putative guanyl-specific ribonuclease f1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       339  (0.0189079); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1918.05
//
Query:       KHJ30031.1  [L=192]
Description: putative virulence effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.17   10.5   1.2       0.22   10.1   1.2    1.2  1  Ceramidase_alk  Neutral/alkaline non-lysosomal ceramidase, N-


Domain annotation for each model (and alignments):
>> Ceramidase_alk  Neutral/alkaline non-lysosomal ceramidase, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.2   1.2e-05      0.22     261     321 ..     101     161 ..      79     184 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 1.2e-05
                     ...................SSS..TSSSTS-HHHHHHHHHHHHHHHHHHHH..HHT-EEE-S- CS
  Ceramidase_alk 261 lCedsgeeCdlekstCegksekcagrgpgkdefestkiigerqfekakell..ksakeevsgk 321
                     +C++ g + + ++ +C   ++  +  gp+k++++s +iiger +++ ++    ++++++v+ +
      KHJ30031.1 101 KCKNCGGPHRSDSYKC--LARPSRYGGPTKEQLKSFRIIGEREYQAVARAKaaEQSATAVTES 161
                     4666666666666666..345556779999**************9987766334444556655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       910  (0.0507558); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1393.87
//
Query:       KHJ30032.1  [L=103]
Description: hypothetical protein EV44_g0253 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.44
# Mc/sec: 707.65
//
Query:       KHJ30033.1  [L=299]
Description: putative ubiquinone biosynthesis methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-76  255.9   0.0    3.5e-76  255.6   0.0    1.0  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
    1.1e-14   54.9   0.0    2.2e-14   53.9   0.0    1.5  1  Methyltransf_25  Methyltransferase domain
    6.4e-13   49.2   0.0    1.4e-12   48.0   0.0    1.6  2  Methyltransf_11  Methyltransferase domain
    2.8e-10   40.8   0.0    4.9e-10   40.0   0.0    1.4  1  Methyltransf_12  Methyltransferase domain
    2.3e-08   34.0   0.0    3.4e-08   33.4   0.0    1.2  1  Methyltransf_31  Methyltransferase domain
    0.00052   19.9   0.0    0.00087   19.2   0.0    1.3  1  Methyltransf_23  Methyltransferase domain
  ------ inclusion threshold ------
      0.036   13.9   0.0       0.24   11.2   0.0    2.0  2  Methyltransf_8   Hypothetical methyltransferase


Domain annotation for each model (and alignments):
>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.6   0.0   1.4e-79   3.5e-76       4     233 .]      48     295 ..      45     295 .. 0.91

  Alignments for each domain:
  == domain 1  score: 255.6 bits;  conditional E-value: 1.4e-79
                      XXXXXXXXXXX-HHHHHHHHHHHHHTTTHHHHHH.HHHHH--S--TT......EEEEES-TT-HHHHHHHHHHHHHH.....EEEEEES-HHHH CS
  Ubie_methyltran   4 lkeekvkevfesvaskyDlmndvlslgihrlWkk.fveklvavkrga......kvlDvagGtgDlafklsdsvgekg.....kvvvlDinenmL 85 
                       ke++v++vf+sva +yD+mnd +slgihrlWk+ fv  ++ + ++       ++lD+agGtgD+af+l+ + ++       +v++ Din++mL
       KHJ30033.1  48 EKEARVASVFSSVAASYDTMNDFMSLGIHRLWKDyFVRSINPGFSSCkpprpwTMLDIAGGTGDIAFRLLTHCDQINhskesTVTISDINQEML 141
                      6899******************************7777765433222344466****************99887766666779*********** PP

                      HHHHHHHHHHTSS...TEEEEE--TTT-TTS-.T-EEEEEEES-GGG-S-HHHHHHHHHHHEEEEEEEEEEEE----SHHHHHHHHHHHH.HHH CS
  Ubie_methyltran  86 kvgekklkeegki...nieflqanaeeLpfed.dsfDvvtvsfGlrnvtDklkaLkeayrvlkpGGrlvvlefskvelpllsqayelyskevlP 175
                       +g+k+   +++    +++fl anae+L+    +s D++tv+fG+rn+t+++ a+ eayrvl+pGG + +lefs+v++ +++  y+ +s++ +P
       KHJ30033.1 142 TEGRKRSLATSYAqspRLKFLLANAEHLDGIPsNSIDLYTVAFGIRNFTNIEAAIAEAYRVLRPGGVFACLEFSQVTNSVFNSIYKRWSFSAIP 235
                      ******99988887899***********97655************************************************************* PP

                      HHHHHHHS-HHHHHHHHHHHHHS--HHHHHHHHHHTTEEE..EEEEEEGGGTEEEEEEEE CS
  Ubie_methyltran 176 vlGkllakdldsyryLvesirafPdqetlkeliedaGfks..veyesltgGvvaihigvk 233
                       +G+l+a d dsy+yLvesi++fP q+ ++++i +aGf+     +e+l+gG++aih gvk
       KHJ30033.1 236 LIGQLVAGDRDSYQYLVESIERFPRQDVFRDMIAKAGFEVpvEGWENLSGGIAAIHKGVK 295
                      **************************************9632479*************98 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.0   8.5e-18   2.2e-14       2      97 .]     103     207 ..     102     207 .. 0.90

  Alignments for each domain:
  == domain 1  score: 53.9 bits;  conditional E-value: 8.5e-18
                      EEET-TTSHHHHHHHCTS....T..SSEEEEEESSHHHHHHHHHHHHH....TTTTEEEEESBCCGBS.SSTTTEEEEEEESTGGGSSHHHHHH CS
  Methyltransf_25   2 LdlGcGtGrltlalakrl....g..kakvtgvDiseemleaareraee....eglnvefvqgdaedlp.fedgsfDlvvssgalhhlsdedlek 84 
                      Ld++ GtG+++++l++++    +  +++vt  Di++eml + r+r  +    ++++++f+ ++ae+l+  +++s+Dl ++++++  ++  ++e+
       KHJ30033.1 103 LDIAGGTGDIAFRLLTHCdqinHskESTVTISDINQEMLTEGRKRSLAtsyaQSPRLKFLLANAEHLDgIPSNSIDLYTVAFGIRNFT--NIEA 194
                      9****************987762569*****************988775555556************967**********99999988..899* PP

                      HHHHHHHHEEEEE CS
  Methyltransf_25  85 alkeiarvLkpgG 97 
                      a++e++rvL+pgG
       KHJ30033.1 195 AIAEAYRVLRPGG 207
                      ************9 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.0   5.6e-16   1.4e-12       1      96 []     103     211 ..     103     211 .. 0.86
   2 ?   -3.1   0.0       5.2   1.3e+04      45      64 ..     248     267 ..     240     272 .. 0.71

  Alignments for each domain:
  == domain 1  score: 48.0 bits;  conditional E-value: 5.6e-16
                      EEET-TTSHHHHHHHHTT........SEEEEEES-HHHHHHHHHHCCHHT-....EEEETTEECCCT.SS-TT-EEEEEEES-CCC-CCHHHHH CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg........arvvgvDlskemlklakekaseegl....kvefvvadaekl.pfednsfDlvvssevlhhvedpekal 81 
                      Ld++ GtG +a  l  ++        ++v+  D+++eml+  ++++         +++f+ a+ae+l  +++ns+Dl ++ + + ++ + e+a+
       KHJ30033.1 103 LDIAGGTGDIAFRLLTHCdqinhskeSTVTISDINQEMLTEGRKRSLATSYaqspRLKFLLANAEHLdGIPSNSIDLYTVAFGIRNFTNIEAAI 196
                      899999999999999444555677899************666655555444567789**********88************************* PP

                      HHHHHHEEEEEEEEE CS
  Methyltransf_11  82 keiaRvLkpgGllvi 96 
                      +e++RvL+pgG++++
       KHJ30033.1 197 AEAYRVLRPGGVFAC 211
                      ************975 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 5.2
                      EEETTEECCCTSS-TT-EEE CS
  Methyltransf_11  45 vefvvadaeklpfednsfDl 64 
                       +++v+++e++p +d   D+
       KHJ30033.1 248 YQYLVESIERFPRQDVFRDM 267
                      56788888888877765555 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.0   0.0   1.9e-13   4.9e-10       1      99 []     103     209 ..     103     209 .. 0.97

  Alignments for each domain:
  == domain 1  score: 40.0 bits;  conditional E-value: 1.9e-13
  Methyltransf_12   1 LeiGcGtGsllrallekl......pdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg..ssfDlvvasnvlhhlkdirevl 86 
                      L+i +GtG+++++ll +       +++++t +Di++++++  +++  + +  +  ++++   +++ ldg   +s Dl ++++ + ++ +i++++
       KHJ30033.1 103 LDIAGGTGDIAFRLLTHCdqinhsKESTVTISDINQEMLTEGRKRSLATSYAQSPRLKFLLANAEHLDGIpsNSIDLYTVAFGIRNFTNIEAAI 196
                      8**************************************************************9999999************************ PP

  Methyltransf_12  87 dnirklLkpgGrl 99 
                      ++++++L+pgG++
       KHJ30033.1 197 AEAYRVLRPGGVF 209
                      ***********86 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   0.0   1.3e-11   3.4e-08       6     113 ..     101     215 ..      98     255 .. 0.84

  Alignments for each domain:
  == domain 1  score: 33.4 bits;  conditional E-value: 1.3e-11
  Methyltransf_31   6 rvlDlGCGtGeltfelae...elgp..kaevvGiDiseeaielArenaqklgld...nveFeqgdieeleklledekfDlilsnevlnaladpd 91 
                      ++lD++ GtG+++f+l     +++   +++v+  Di++e+++  r+++    +    +++F  +++e+l+  +  +++Dl +    +  +++ +
       KHJ30033.1 101 TMLDIAGGTGDIAFRLLThcdQINHskESTVTISDINQEMLTEGRKRSLATSYAqspRLKFLLANAEHLDG-IPSNSIDLYTVAFGIRNFTNIE 193
                      69***************87874444225559999************88888887789***********997.7889****98887889****** PP

  Methyltransf_31  92 kileeiervlkpggilliedpr 113
                      +++ e+ rvl+pgg++++ +++
       KHJ30033.1 194 AAIAEAYRVLRPGGVFACLEFS 215
                      ******************9999 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   3.4e-07   0.00087      25     162 ..     101     275 ..      67     276 .. 0.68

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 3.4e-07
  Methyltransf_23  25 rvLdiGcGtG.illevlren...gf....svtgvDlspeaveiae......kakkaqkdqfdeqeaae.............pqgkfdlIvlrev 91 
                        Ldi+ GtG i  ++l  +    +    +vt  D++ e+  + +      +  +++                        p++++dl +  ++
       KHJ30033.1 101 TMLDIAGGTGdIAFRLLTHCdqiNHskesTVTISDINQEMLTEGRkrslatSYAQSPR---------LkfllanaehldgiPSNSIDLYTVAFG 185
                      78********887777755321133445699999999887776545555553333333.........22333334446667888********** PP

  Methyltransf_23  92 lehvpdppellrqiatllkpgGylllseplasl.......................kedrllldwlylvpagrhisffsarslkelleeaGlev 162
                      + ++ + +++++ +++ l+pgG++ ++e+   +                         + + ++++ylv+     +f + + ++++  +aG+ev
       KHJ30033.1 186 IRNFTNIEAAIAEAYRVLRPGGVFACLEFS--QvtnsvfnsiykrwsfsaipligqLVAGDRDSYQYLVES--IERFPRQDVFRDMIAKAGFEV 275
                      ***********************9999983..323556777766666665555532223333335555544..557777777888888888886 PP

>> Methyltransf_8  Hypothetical methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   9.2e-05      0.24     134     161 ..     189     216 ..     171     231 .. 0.77
   2 ?   -0.2   0.0       0.3   7.6e+02     156     181 ..     251     276 ..     246     284 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9.2e-05
                     SS-HHHHHHHHHHHEEEEEEEEEEEEGG CS
  Methyltransf_8 134 gtnladflkeanrvlkvGGllkvaevks 161
                      tn++  + ea+rvl++GG++   e + 
      KHJ30033.1 189 FTNIEAAIAEAYRVLRPGGVFACLEFSQ 216
                     49******************99888654 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.3
                     EEEEGGG-S-HHHHHHHHHCTTEEEE CS
  Methyltransf_8 156 vaevksrfesvklfaraltklGfevk 181
                     + e   rf+  ++f   + k Gfev 
      KHJ30033.1 251 LVESIERFPRQDVFRDMIAKAGFEVP 276
                     566677999999999999**999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2279.69
//
Query:       KHJ30034.1  [L=643]
Description: putative glycoside hydrolase family 15 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-95  320.8   0.0    1.6e-95  320.5   0.0    1.0  1  Glyco_hydro_15  Glycosyl hydrolases family 15
    3.6e-23   81.3   0.0      9e-23   80.0   0.0    1.7  1  CBM_20          Starch binding domain


Domain annotation for each model (and alignments):
>> Glyco_hydro_15  Glycosyl hydrolases family 15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  320.5   0.0   1.8e-99   1.6e-95       2     446 ..      57     474 ..      56     476 .. 0.97

  Alignments for each domain:
  == domain 1  score: 320.5 bits;  conditional E-value: 1.8e-99
                     HHHHHHHHCBCSTTSSBTTS-TT-B-S-S-BSSSB--SEEHHHHHHHHHHHH.......HHHHHTTT-HCCHHHHHHHHHHHHHHCTS-BTTB-T CS
  Glyco_hydro_15   2 vrldlylrnvktlilleqnpvtGlliASpstsdpDYrytWvRDsvyvilavwglgyrdedrakayeleqslvklmrglleamvrqagkvekfket 96 
                     ++l+ +++n++ ++++++++ +Gl++A p +s+pDY+ytW+RDs+++++ ++        ++++ e+++ l++ ++++++a+++ +   +++++ 
      KHJ30034.1  57 ISLSRIFCNIGPVGACVPGTSSGLVVAGPGKSNPDYFYTWTRDSALTFKYLV--------DKFIDEYDRYLQEQIENYIDAQAKLQTVANPSGNL 143
                     56778899********************************************........99********************************* PP

                     TSCGGGG--EE-TTS-B--S-..-S--BTTHHHHHHHHHHHH....HCTT..HCHCCCCHHHHTHHHHHHHHHHHTTS-EE-TTS--ECEEHH.. CS
  Glyco_hydro_15  97 qstkgLhakyftktgstvvGddewghlQlDatslyllalaqm....tasg..lqiistldevafvqnlvdYieaayktpdfglWEenqgeselna 185
                      +++gL++++f+++gs++ G+  wg++Q+D+++l++++l+++    +++g  + ++++++++  ++n+++Yi++++++++f+lWEe++g+s++  
      KHJ30034.1 144 HDGSGLGEPKFNTDGSPFPGS--WGRPQRDGPALRAITLITYskwlITAGlnQIANDNVWPI--IRNDLSYIAQYWNQTGFDLWEEVEGSSFF-- 232
                     *********************..***********************9999766678999999..*****************************.. PP

                     HHHHHHHHHHHHHHHHHHCT-HHHHCCHHHHHHHHHHHHHSTTT..GGGEETTCCECECSCH.....HHHTTS--S-BCHHHHHHHHCS-TTS-T CS
  Glyco_hydro_15 186 ssvgmakAlleaideadlfgakgdaqlvektkdeilnklqgkygckrgfwplfntylildgsfaedkeqvqeyrealdasllllpelyfvpaddv 280
                     +++ + +Al+e+ d+a l+g   +  l++++ +++++ l       + fw+ +  y+ ++ +           r+a+das+++++++ f+p + +
      KHJ30034.1 233 TILSQYRALVEGCDLASLLG--ISFLLCNTQPPQLACFL-------QKFWDPSRGYILANIN-------ESSGRSAKDASTIIASIHQFDPTAGC 311
                     ********************..9999*************.......99*****999999999.......5689********************** PP

                     T-TT-TTTSHHHHHHHHHHHHHHHHHSGGGTT-STTS...--SBTT--CGSSSBSCT--BHHHHHHHHHHHHHHHHHHHHHTE-EEEECCCHHHH CS
  Glyco_hydro_15 281 deeyqnpqsprllaqslyildsllsegflavgeldpl...vrRysedvkpdklglsGrpyylctlwtvetlldelyekagkgrlwglvryalgll 372
                     d+ +++p+s+ +la++++++ds++s ++++ g ++++   v+Ry+ed ++     +G+p+yl+tl+++e+l+d+ly +++  +++++++ +l+++
      KHJ30034.1 312 DSLTFQPCSDLALANHKVVTDSFRSIYPINFGISQGKavsVGRYPEDIYY-----KGNPWYLTTLAAAEQLYDALYVWEKF-KFINITNISLHFF 400
                     *************************************************9.....***********************998.88*********** PP

                     HHHTTTTTGGGSSEEE.TCHHHHHHHHHHHHHHHHHHHHHH.S-TTS---SEE-TTT--EESSTT-HHHHHHHHHH CS
  Glyco_hydro_15 373 eklveskqltvGlppe.resvisaplpveeladliveavee.dnslgvLteevdvylgeliraqpllfsealllri 446
                     +++  +  ++ G++   + ++ +  +++  +ad++v++v+  ++ +g+L+e++d+++g + +a +l++s++++l++
      KHJ30034.1 401 QDFSPN--IQIGIYQDtTLEYQNLLNSISSYADEFVKVVQRyAQFNGSLSEQFDKVTGNPSSAYDLTWSYVAFLTA 474
                     ******..******************************************************************98 PP

>> CBM_20  Starch binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.0   0.0     1e-26     9e-23       2      94 ..     545     637 ..     544     640 .. 0.96

  Alignments for each domain:
  == domain 1  score: 80.0 bits;  conditional E-value: 1e-26
      CBM_20   2 vsVtFkvnattqlgesvyivGsiseLGnWnpkkavklsaseqtssyplWsttvslpagtkieYkyikkdsdgsvtWesgenrsltvpssgsst 94 
                 v V+F+   tt++g+++ i Gs+s LGnW+ ++a +lsas+++ s plW++t+ + +g +i+Yky+  ++dg+++We +++++l+vp+s++++
  KHJ30034.1 545 VLVSFNKLITTSYGDTIKILGSESDLGNWKLENATALSASNYSPSFPLWRATIPITSGITIQYKYLNFKADGTIEWEDSSDHTLNVPRSCETV 637
                 679999989*********************************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (643 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 4325.08
//
Query:       KHJ30035.1  [L=368]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.02   15.0   0.4      0.037   14.1   0.4    1.4  1  LPD39     Large polyvalent protein associated domain 39


Domain annotation for each model (and alignments):
>> LPD39  Large polyvalent protein associated domain 39
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.4     2e-06     0.037     109     193 ..      47     133 ..      26     135 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2e-06
       LPD39 109 eretlkeeperkaeyaeLrkrfeaLpeeak..alYkkvRdaYkkqaeelrealeenieraaeiaeakaerllkkelqrikdeglkGv 193
                  +e+++  ++r ae ++  ++f +L e     ++  ++++a   ++e+lr++l  ni++a++ ++++++ l++k+ ++ k ++ k++
  KHJ30035.1  47 IEEQARVFNTRLAEAQHVINQFTTLYESISdpEIRAAMKEAAVGIKEQLRAILTGNIKKATNPSQSNRKTLIQKTVEQKKPTKTKDQ 133
                 45666677888888888888999998876523799*******************************************999888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1083  (0.0604049); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2829.11
//
Query:       KHJ30036.1  [L=1348]
Description: putative phosphoribosylformylglycinamidine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-96  322.8   0.0    1.7e-96  322.3   0.0    1.2  1  GATase_5        CobB/CobQ-like glutamine amidotransferase dom
    9.5e-37  126.5   0.1    4.5e-22   78.8   0.0    2.3  2  AIRS_C          AIR synthase related protein, C-terminal doma
    1.6e-22   79.7   0.0      3e-22   78.8   0.0    1.5  1  FGAR-AT_N       Formylglycinamide ribonucleotide amidotransfe
    1.4e-20   73.6   0.1    3.1e-20   72.5   0.1    1.6  1  FGAR-AT_linker  Formylglycinamide ribonucleotide amidotransfe


Domain annotation for each model (and alignments):
>> GATase_5  CobB/CobQ-like glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  322.3   0.0  3.8e-100   1.7e-96       2     260 .]    1086    1347 ..    1085    1347 .. 0.96

  Alignments for each domain:
  == domain 1  score: 322.3 bits;  conditional E-value: 3.8e-100
    GATase_5    2 pkvailreeGvngeyemaaafekaGfeavdvhmsdllegrvslddfqilalpGGfsygDelgsgkgwaksllln.eklrealekflnredtlaLGiC 97  
                  pkvailre+Gvng++ema af+ aGf+ +dvhmsd++ g+ +l+df +l+++GGfsygD+lg+g+gwaks+l++ e++r ++e+f++r+dt++LG+C
  KHJ30036.1 1086 PKVAILREQGVNGHAEMAFAFKSAGFDPIDVHMSDIIGGQ-TLSDFVGLVACGGFSYGDVLGAGQGWAKSILMHlENARPEFERFFARPDTFTLGVC 1181
                  8***********************************8887.9******************************999********************** PP

    GATase_5   98 nGfqlLvklg.lvpggeieeaeksptltrNksgrfesrlvsvvvseks..psvflkgmeglslp..vahGeGrfvfkseevlkeleangqvalrYvd 189 
                  nG+q+L++++ l+pg     ++++p + +Nks++fe+rl++v+++++s  psvfl+gm+g+slp  v+hGeGr+ f+s+  l++l + g++++rYvd
  KHJ30036.1 1182 NGCQMLTRIKeLIPG-----TDNWPLFLQNKSRQFEARLSMVKIQDDSkiPSVFLHGMHGSSLPiiVSHGEGRATFSSPLGLENLDSDGLIPFRYVD 1273
                  ***************.....9*********************887776559*************99******************************* PP

    GATase_5  190 eegkpteeyplNPNgSpegiagitspdGRvlalmpHpervveavqksiipe...eeeeevspwlrlFenavkyv 260 
                  ++g++t++yp+NPNgSp+giag+ + dGRvla+mpHper+v a   s+ p+   e++++++pwlr+F++a+++v
  KHJ30036.1 1274 NRGSVTTRYPFNPNGSPQGIAGVRNVDGRVLAMMPHPERTVIAETGSFGPKhevEQWDKFGPWLRIFRSARRWV 1347
                  *********************************************999888444455559*************7 PP

>> AIRS_C  AIR synthase related protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   0.0     1e-25   4.5e-22       2     150 ..     436     589 ..     435     592 .. 0.93
   2 !   45.6   0.0   1.7e-15   7.7e-12       2     149 ..     855    1002 ..     854    1009 .. 0.84

  Alignments for each domain:
  == domain 1  score: 78.8 bits;  conditional E-value: 1e-25
                 TTEEEEEEET....SSCTCCHHHHHHHCHHHCTSHTTTSEHHHHHHHHHHHHHHHHHHHH..HTTECEEEE--TTHHHHHHHHHHHTTTEEEEEECGTH CS
      AIRS_C   2 pGdvliltgs....lGlggagtslkrkileeeglddsavqlgdvlleptliyvkralaal..kglvkaahDvTgGGLlgalaemapasgvgaeidldkv 94 
                 +G  +i++g+    +Glgg + s+   ++++ +ld ++vq+g++++e++ + v   + al  ++++  +hDv++GG+++a++e+++++g g +++l ++
  KHJ30036.1 436 EGAHVIVLGGpamlIGLGGGAASSNISGDTSIELDFNSVQRGNPEMERRAQMVINTCVALgeNNPIALIHDVGAGGISNAIPELIKDAGYGGNFELRNI 534
                 66666777777**********8887777777777777************************************************************** PP

                 HHHHHHHHHHHHHHCSTTTEEEEEEEHGGHHHHHHHHHHTTCCCEEEEEEEEESSS CS
      AIRS_C  95 pifdelesplemllsensGrllvavppeeadavlaileeeglpeaavIGevtakee 150
                    d  +spl++++ e ++r++v++ + + +++++i+++e++  ++ +G v +k++
  KHJ30036.1 535 DSSDSNMSPLQIWCCEAQERYVVLINKHNLNRFISIADRERC-GFSDVGVVLPKHK 589
                 ******************************************.6********9986 PP

  == domain 2  score: 45.6 bits;  conditional E-value: 1.7e-15
                  TTEEEEEEET.....SSCTCCHHHHHHHCHHHCTSHTTTSEHHHHHHHHHHHHHHHHHHHHHTTECEEEE--TTHHHHHHHHHHHTTTEEEEEECGT CS
      AIRS_C    2 pGdvliltgs.....lGlggagtslkrkileeeglddsavqlgdvlleptliyvkralaalkglvkaahDvTgGGLlgalaemapasgvgaeidldk 93  
                  +Gd+++l          lgg++++ + + l +++ d     + d+ l+    ++   l ++ g v a hDv++GG++ ++aem++a+++g+ i++d 
  KHJ30036.1  855 VGDTILLFVDlakghKSLGGSALAQAFGKLGDDAPD-----VRDADLLTDFSDAITQLHES-GIVLAYHDVSDGGIITTIAEMMFAGRCGLDISIDS 945 
                  688888888888888999****88888788887776.....*******************8.**********************************9 PP

                  HHHHHHHHHHHHHHHCSTTTEEEEEEEHGGH...HHHHHHHHHTTCCCEEEEEEEEESS CS
      AIRS_C   94 vpifdelesplemllsensGrllvavppeea...davlaileeeglpeaavIGevtake 149 
                  +   d le  le+l+ e+ G   + v+++++   +++ a+++    +  + IG++ + +
  KHJ30036.1  946 LVESDSLEHILEALFNEELGAI-FQVRKADEinfNRCFATCGPPKGL-IKKIGRISPAK 1002
                  9999999999*******99955.555555555888888888866665.88888887765 PP

>> FGAR-AT_N  Formylglycinamide ribonucleotide amidotransferase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   0.0   6.7e-26     3e-22       2     115 .]      33     149 ..      32     149 .. 0.91

  Alignments for each domain:
  == domain 1  score: 78.8 bits;  conditional E-value: 6.7e-26
   FGAR-AT_N   2 yvhfveleeelseeeravleqlLeygdk.......leeeeeegelllVvPRlGtiSpWsSkAtdIahncglekvkRiErgiayvlelkelseeelaala 93 
                 +++++ l+++ +e+ +a++++lL+  ++       le+ ++++++l+ +PR   iSpWsSkAt+I ++cg+++++RiErg  + +++ + + +++++++
  KHJ30036.1  33 WLYYCCLKNN-NENVQAKISELLSIPTTtlgeigpLEQISDTSHVLYSIPRN--ISPWSSKATSISQVCGIKQLERIERGKMIIVDF-KKTLHRNDNWK 127
                 6788888777.88999999****998877888888889999999*******5..*********************************.667788999** PP

   FGAR-AT_N  94 alLhDrmtesvleeledaealF 115
                 ++L+Drmtes++++ +da+++F
  KHJ30036.1 128 DVLYDRMTESLSDSIPDASKIF 149
                 ********************99 PP

>> FGAR-AT_linker  Formylglycinamide ribonucleotide amidotransferase linker domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.5   0.1   6.8e-24   3.1e-20       1      50 []     172     221 ..     172     221 .. 0.98

  Alignments for each domain:
  == domain 1  score: 72.5 bits;  conditional E-value: 6.8e-24
  FGAR-AT_linker   1 LeeankelglaLsdeEidylqeafeklgrnPtdvElemfaqvwSEHCrHK 50 
                     L+++n ++gl+L+++Ei+yl++a++kl r Ptd+El+mfaq++SEHCrHK
      KHJ30036.1 172 LNDYNLQNGLSLDKAEIEYLAQAYKKLDRSPTDIELFMFAQINSEHCRHK 221
                     6899*********************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       473  (0.0263818); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.79u 0.31s 00:00:01.10 Elapsed: 00:00:00.45
# Mc/sec: 9087.05
//
Query:       KHJ30037.1  [L=356]
Description: hypothetical protein EV44_g3186 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      0.004   16.8   0.0     0.0089   15.7   0.0    1.6  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type
     0.0061   16.4   0.2     0.0099   15.7   0.2    1.3  1  DUF2947          Protein of unknown function (DUF2947)


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   9.9e-07    0.0089       1      49 [.     215     263 ..     215     285 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 9.9e-07
  Retrotran_gag_2   1 wkkkdakalalIvlsisdsllelvkeektakevWdkLkelyekksaank 49 
                      w + ++ka + I+   +      + + +t++e+W++L++ ye+++   +
       KHJ30037.1 215 WVTGNTKAANSIMYNCETTPQLVITNYQTSAEMWRALEQAYEGTGIVVQ 263
                      66778999999999999999999*******************9987655 PP

>> DUF2947  Protein of unknown function (DUF2947)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.2   1.1e-06    0.0099      41     135 ..     170     263 ..     143     277 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.1e-06
     DUF2947  41 kenisaesseaerlskkdwaskesawleeeeWqkawdsddeelpeallehldwqddttvyfCyekenvietkwdvFkrnWknFlFlddgpllvgk 135
                 ++ +s+ ss+  ++ ++ +++ ++++++  +Wq+  +s+ ++++e ++ +  + ++ ++y C    +++ t++++    W++   + +g+ +v +
  KHJ30037.1 170 QSALSDPSSHLPTFINQLKMAVKEVKVDLSNWQSMDQSKLDKMSEWVTGNT-KAANSIMYNCETTPQLVITNYQTSAEMWRALEQAYEGTGIVVQ 263
                 67899999***************************************9986.578899***********************98776666655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2494.12
//
Query:       KHJ30038.1  [L=118]
Description: hypothetical protein EV44_g4980 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 866.50
//
Query:       KHJ30039.1  [L=706]
Description: putative atp-dependent rna helicase dbp6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-33  115.7   0.1    8.9e-16   58.1   0.0    2.8  2  DEAD        DEAD/DEAH box helicase
    3.9e-25   88.4   0.1      2e-24   86.1   0.0    2.3  2  Helicase_C  Helicase conserved C-terminal domain
    8.2e-06   25.9   2.7    9.2e-06   25.8   0.0    2.5  2  ResIII      Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.1     2e-18   1.2e-14       2      94 ..     168     271 ..     167     297 .. 0.86
   2 !   58.1   0.0   1.5e-19   8.9e-16      92     175 ..     321     407 ..     306     408 .. 0.85

  Alignments for each domain:
  == domain 1  score: 54.5 bits;  conditional E-value: 2e-18
                 HHHHHHHHHHH.....TTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTST.......SEEEEEETTSSHH CS
                 xxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplil.....gggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyid.......lrvlliiggvaar 88 
                 +iQ +a++l+l     +++dv+++a+TGsGKT  +++p++++ ++ ++ t+ + +++ PtreL+ q  + ++++ +          ++++  ig+++ +
  KHJ30039.1 168 AIQLAAFKLLLprpniEKRDVVISAATGSGKTFSYVLPMVEESSR-HQVTKLRGIVILPTRELVSQAKHVAETCAEAFAksdkrklVKICTAIGNQTLK 265
                 79*********9999899**********************99987.9*******************999988888853335578888888889988888 PP

                 HHHHHH CS
                 xxxxxx RF
        DEAD  89 dqlskl 94 
                 ++++ l
  KHJ30039.1 266 SEQQCL 271
                 777666 PP

  == domain 2  score: 58.1 bits;  conditional E-value: 1.5e-19
                 HHHHTTCSEEEEEHHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTST..TTSEEEEEESSBSHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxx RF
        DEAD  92 skldngvdivvgtpgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgk..lqrqvivlSATlpkdvkk 175
                 ++++ +vdi++ tpgrl+++l s+  ++l+++++l++DEad+lldq+f++++  +++++    ++ +  +  + ++lSAT+++d+++
  KHJ30039.1 321 KEFRMKVDILICTPGRLVEHLkSSPGFSLKDLKWLIIDEADKLLDQSFQQWLPLVMSKIGPPHKTLSreNRIRKVILSATMTSDLSQ 407
                 556789*************99667779********************************65555544313345*********99876 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.9   1.1e+04      40      48 ..     252     260 ..     219     286 .. 0.53
   2 !   86.1   0.0   3.3e-28     2e-24      14     111 .]     542     643 ..     532     643 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.9
                 TSTEEEEST CS
  Helicase_C  40 gikvavlhg 48 
                  +k+++  g
  KHJ30039.1 252 LVKICTAIG 260
                 233333333 PP

  == domain 2  score: 86.1 bits;  conditional E-value: 3.3e-28
                 TTTSEEEEEESSHHHHHH....HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTTSS CS
  Helicase_C  14 eeggkilifvntidrlek....vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqriGRtg 108
                 ++ + +l+f+++ +++ +    +++l  +++ ++ vl+++lp ++r++ l++f k+++ +L+a+d ++rG+d+p++ +Vin+d+p ++ syi+r+GRt+
  KHJ30039.1 542 QKPRGVLVFCKSNETAARlgrlIEILSPSSNTRIGVLTSTLPRSKRQHYLNSFLKNKVSILVASDLISRGLDLPDLAHVINYDMPSSLISYIHRVGRTA 640
                 567789********66555557788877779******************************************************************** PP

                 STT CS
  Helicase_C 109 Rag 111
                 Rag
  KHJ30039.1 641 RAG 643
                 *97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.5       0.6   3.6e+03     104     116 ..      42      54 ..      12      91 .. 0.45
   2 !   25.8   0.0   1.5e-09   9.2e-06      23     121 ..     184     284 ..     151     403 .. 0.62

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.6
                 -SEEEEEHHHHHH CS
      ResIII 104 kkilvttiqslda 116
                  +i v +  + + 
  KHJ30039.1  42 DNIKVLKAVKTNF 54 
                 2222222211111 PP

  == domain 2  score: 25.8 bits;  conditional E-value: 1.5e-09
                 TTSEEEEEESTTSTHHHHH.HHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG...........GEEEESSS-B--.......-SEEEEEHH CS
      ResIII  23 rdkrglikmaTGtGKTlva.aklierllkkgkee.kflflvprkslleqtleefkkflseayke.......igkkvsgdkkkakekdstnkkilvttiq 112
                 +++ ++i +aTG+GKT+ + + ++e+ ++++  + + +++ p+++l++q+++  + +++  +k+       i++ + +++        ++ + ++++ +
  KHJ30039.1 184 EKRDVVISAATGSGKTFSYvLPMVEESSRHQVTKlRGIVILPTRELVSQAKHVAETCAEAFAKSdkrklvkICTAIGNQTL-------KSEQQCLIEQE 275
                 566899*************666666666655555899**************555444443333332232224444444444.......44555555555 PP

                 HHHHTH... CS
      ResIII 113 sldadseee 121
                 ++++ ++ e
  KHJ30039.1 276 EIYNLEKYE 284
                 565555333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (706 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1031  (0.0575046); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 4924.45
//
Query:       KHJ30040.1  [L=81]
Description: hypothetical protein EV44_g3990 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.27s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 596.73
//
Query:       KHJ30041.1  [L=549]
Description: putative sh3 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-05   23.2   0.1    8.3e-05   22.4   0.1    1.4  1  SH3_9       Variant SH3 domain
     0.0011   18.5   0.1      0.002   17.7   0.1    1.4  1  SH3_1       SH3 domain
  ------ inclusion threshold ------
      0.058   13.5   0.1       0.14   12.3   0.1    1.6  1  Podoplanin  Podoplanin
      0.081   13.5   0.0       0.22   12.2   0.0    1.7  1  DUF4690     Small Novel Rich in Cartilage


Domain annotation for each model (and alignments):
>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.1   1.8e-08   8.3e-05       1      35 [.     439     473 ..     439     479 .. 0.89

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 1.8e-08
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegs 35 
                 +l++y+pr +de+ L+rGD + v++  +dgW  g 
  KHJ30041.1 439 VLWAYQPRATDEFALERGDMLKVAGIWDDGWATGV 473
                 89*********************98888***9886 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.1   4.5e-07     0.002       3      39 ..     440     476 ..     438     479 .. 0.92

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 4.5e-07
                 SSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETT CS
       SH3_1   3 lYDYeaeesdELsfkkGDviivleksedgWwkgrlkg 39 
                 l  Y+++ +dE  +++GD+++v    +dgW +g +++
  KHJ30041.1 440 LWAYQPRATDEFALERGDMLKVAGIWDDGWATGVMIN 476
                 778******************************9885 PP

>> Podoplanin  Podoplanin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   3.1e-05      0.14      99     153 ..     209     263 ..     196     269 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.1e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Podoplanin  99 tttlnvvtshstekvgeetettvekdGLatvtLvgiivGvllaigfiggiiivvv 153
                 tttl   t ++ + +   ++t  +   L+  ++ gii+G +l++++ +g++++++
  KHJ30041.1 209 TTTLPSQTGSPPKSTATGKSTGDNYSNLSSGAIAGIIIGSILGLSLFAGLFFLFI 263
                 788888888888889999999999**************************99876 PP

>> DUF4690  Small Novel Rich in Cartilage
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   4.8e-05      0.22      36      85 ..     210     258 ..     201     270 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4.8e-05
     DUF4690  36 tdlpastselepeDtthlerldeeegslGPGaiaaiviaalLgasvllaL 85 
                 t lp +t ++    +t  ++ d+  + l  Gaia i+i ++Lg s    L
  KHJ30041.1 210 TTLPSQTGSPPKSTATGKSTGDNY-SNLSSGAIAGIIIGSILGLSLFAGL 258
                 556777766666666666666665.89****************9986554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (549 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       485  (0.0270511); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 4017.67
//
Query:       KHJ30042.1  [L=195]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.17   11.6   2.8       0.46   10.2   2.8    1.7  1  Bim_N     Bim protein N-terminus


Domain annotation for each model (and alignments):
>> Bim_N  Bim protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.8   2.5e-05      0.46       6      34 ..      99     127 ..      97     132 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 2.5e-05
       Bim_N   6 sseCdrEGGQLQpteRpaqprqLRpGAPT 34 
                 s  C   GG   + +R    r+ RpGAPT
  KHJ30042.1  99 STKCRNCGGPHRSDSRRCLARPTRPGAPT 127
                 56799999********************* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       750  (0.0418317); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1435.24
//
Query:       KHJ30043.1  [L=875]
Description: putative arrestin domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-19   70.6   0.0    1.5e-18   67.6   0.0    2.5  2  Arrestin_C  Arrestin (or S-antigen), C-terminal domain
    0.00035   20.7   0.1       0.34   11.0   0.0    2.8  3  Arrestin_N  Arrestin (or S-antigen), N-terminal domain


Domain annotation for each model (and alignments):
>> Arrestin_C  Arrestin (or S-antigen), C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0         1   9.4e+03      78     110 ..     393     423 ..     350     429 .. 0.65
   2 !   67.6   0.0   1.6e-22   1.5e-18       1     132 [.     464     677 ..     464     679 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1
                 .EEEEEEE.--..--B-----S---EEEEEEEEEE CS
  Arrestin_C  78 kletevelqiP..eeltpssarnvelikvsYklkv 110
                  ++  +++++P  ++l++++  n  l +v+ +l+ 
  KHJ30043.1 393 VYD--YSFELPidCNLPETT--NLPLANVKWELEA 423
                 444..444445557777777..6666666666665 PP

  == domain 2  score: 67.6 bits;  conditional E-value: 1.6e-22
                 ----EEEEEEES-SEEETT--EEEEEEEEE-SSSEEEEEEEEEEEEEEEESS............................................... CS
  Arrestin_C   1 wdgkvsleaslpkkgyvpGetipvtvkidndskkkvkkikvslvqhvdvcafnr............................................. 54 
                 wd+++++++++++k++++G +ip+ +k++++ k++v+k+kv l ++v+++a++r                                             
  KHJ30043.1 464 WDQQLHYDIVISGKSFPIGTKIPIAFKLTPLAKVQVHKVKVFLSENVEYFARDRsvhrkdikrrllllekiagkpvakefwpsevkivggertieerem 562
                 99**************************************************99**9988888888877777777777777777766666655544333 PP

                 ..SEEEEEEEEEEEEE---...................................B-TTEE.EEEEEEE.--..........--B-----S---EEEEEE CS
  Arrestin_C  55 ..snkkeknvvaksdsvkv...................................tsaakdkletevelqiP..........eeltpssarnvelikvsY 106
                   s               v                                   +   ++++e  +++qiP          + l  ++  + ++++v++
  KHJ30043.1 563 rrS---------------VamqrreaeavrnnthpvplpessenilgdidlgveEWWGQTEIE--MNVQIPtcetmekdrtKRLSHDC--TWSNVNVHH 642
                 330...............133333333455555556668888888888888865555555555..77788888888865555555577..9******** PP

                 EEEEEEEEE........S.SEEEEEEEEEEEEEB- CS
  Arrestin_C 107 klkvkltls........g.sggelslelPivlgsv 132
                 +lk+ ++ls        + +++e+s+++Pi l+++
  KHJ30043.1 643 WLKILIRLSradaddptKrRHYEISVDSPISLLNC 677
                 ****************967*************987 PP

>> Arrestin_N  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0   0.00098       8.8      19      49 ..     239     269 ..     233     300 .. 0.88
   2 !   11.0   0.0   3.7e-05      0.34      57     140 ..     361     444 ..     333     448 .. 0.68
   3 ?   -3.8   0.0       1.3   1.2e+04      34      79 ..     501     522 ..     491     537 .. 0.54

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.00098
                 EEEEEE-CCCCTT.CEEEEEEEEEEEESSSS CS
  Arrestin_N  19 dGkvlleteelkkarkvkielsgkartgwee 49 
                  G+  l+ +++ k+++v +++sg+a+t w e
  KHJ30043.1 239 RGTLRLNVTKNAKIKAVSLKFSGRAKTLWPE 269
                 699999*********************9975 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 3.7e-05
                 EEEEEEEEEEEEESTSSSSS.SSSSHHHHHHHH-TTEEEEEE---TTS--SECSGEEEEEEEEEEEEECCC..E--C.CCEEEEEE CS
  Arrestin_N  57 frkdltlkkkqeyleteksllkskkdsqekLpkGehafpFsfelPknlpsSfeGkaggvrYevkvtldrpw..kidkkkkkvftVi 140
                  +  +   ++q+  ++++  ++  +++ + +  G + ++F + +  nlp + +    +v++e+++t++r+   k++   +k++ V+
  KHJ30043.1 361 MSAPSIQLTSQQMSDSSHNSVQ--TKGYKVFYPGVYDYSFELPIDCNLPETTNLPLANVKWELEATIERAGafKPKLVGRKEVPVV 444
                 3333333334455555555333..466666889*************************************9444444466666665 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 1.3
                 EEEEEEEEEEEESSSSTTTTCCCEEEEEEEEEEEEESTSSSSS.SS CS
  Arrestin_N  34 kvkielsgkartgweesevagktfrkdltlkkkqeyleteksllks 79 
                 kvk+                        +l++++ey++ + s++++
  KHJ30043.1 501 KVKV------------------------FLSENVEYFARDRSVHRK 522
                 4444........................444445555544444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (875 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 5944.92
//
Query:       KHJ30044.1  [L=411]
Description: putative dna-binding protein crea [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-09   38.0  15.1    0.00012   22.4   4.8    3.9  3  zf-H2C2_2    Zinc-finger double domain
    1.2e-05   25.5  21.3      0.001   19.4   5.5    3.2  3  zf-C2H2      Zinc finger, C2H2 type
      8e-05   23.1  13.2      0.031   15.1   4.1    3.2  2  zf-C2H2_4    C2H2-type zinc finger
  ------ inclusion threshold ------
       0.06   13.6   0.8       0.06   13.6   0.8    2.7  3  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
       0.19   12.4   1.6       0.75   10.5   0.1    2.3  2  FOXP-CC      FOXP coiled-coil domain
        1.3    9.1   6.7        1.3    9.1   0.9    2.6  2  zf-C2H2_6    C2H2-type zinc finger


Domain annotation for each model (and alignments):
>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.2     6e-06     0.018      12      24 ..      30      42 ..      23      44 .. 0.87
   2 !   22.4   4.8   3.9e-08   0.00012       3      25 ..      49      73 ..      49      74 .. 0.91
   3 !    5.5   0.2    0.0087        26       2      13 ..      78      89 ..      77      91 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 6e-06
   zf-H2C2_2 12 ekpyeCplCdkaF 24
                ++py+CplC k+F
  KHJ30044.1 30 PRPYKCPLCEKSF 42
                579*********9 PP

  == domain 2  score: 22.4 bits;  conditional E-value: 3.9e-08
   zf-H2C2_2  3 rrHirkHtgekpyeCp..lCdkaFk 25
                +rHir+Htgekp+ C+   C k+F+
  KHJ30044.1 49 TRHIRTHTGEKPHRCShpGCIKRFS 73
                59**************888*99997 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.0087
   zf-H2C2_2  2 LrrHirkHtgek 13
                L+rH+r H +++
  KHJ30044.1 78 LTRHLRIHINPN 89
                99******9886 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   5.5   3.4e-07     0.001       1      23 []      33      55 ..      33      55 .. 0.99
   2 !   14.8   3.6   9.6e-06     0.029       1      23 []      61      85 ..      61      85 .. 0.95
   3 ?   -2.4   0.1       2.9   8.7e+03      10      19 ..     231     240 ..     220     240 .. 0.67

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 3.4e-07
                EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCpdCgksFkrksnLkrHirtH 23
                ykCp C ksF r ++ +rHirtH
  KHJ30044.1 33 YKCPLCEKSFHRLEHQTRHIRTH 55
                9*********************9 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 9.6e-06
                EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCp..dCgksFkrksnLkrHirtH 23
                ++C+  +C k+F+r+++L+rH+r+H
  KHJ30044.1 61 HRCShpGCIKRFSRSDELTRHLRIH 85
                6899999*****************9 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 2.9
                 ESSHHHHHHH CS
     zf-C2H2  10 FkrksnLkrH 19 
                 F ++s+ ++H
  KHJ30044.1 231 FASSSLVQSH 240
                 6666666666 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   4.1   1.1e-05     0.031       1      23 [.      33      55 ..      33      56 .. 0.96
   2 !   11.9   1.7   0.00011      0.33       1      23 [.      61      85 ..      61      86 .. 0.94

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.1e-05
   zf-C2H2_4  1 fkCpiCgksFsskkaLlrHlkth 23
                +kCp+C ksF++ ++  rH++th
  KHJ30044.1 33 YKCPLCEKSFHRLEHQTRHIRTH 55
                8**************999****9 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00011
   zf-C2H2_4  1 fkCpi..CgksFsskkaLlrHlkth 23
                ++C++  C k+Fs++++L rHl+ h
  KHJ30044.1 61 HRCSHpgCIKRFSRSDELTRHLRIH 85
                6899999****************98 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.8     2e-05      0.06       2      26 ..      33      61 ..      32      62 .. 0.88
   2 ?   -1.5   0.0       1.1   3.4e+03       9      22 ..      70      83 ..      68      83 .. 0.86
   3 ?   -2.2   0.2       1.9   5.7e+03      19      24 ..     173     178 ..     172     179 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2e-05
                 CBBTTTTBBBSSHHHHHCCTTS....HHH CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHlkS....KkH 26
                 + C+lC+K F+  +    H+++    K+H
   KHJ30044.1 33 YKCPLCEKSFHRLEHQTRHIRThtgeKPH 61
                 89*******************97777777 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.1
                 BBBSSHHHHHCCTT CS
  zf-C2H2_jaz  9 KyFksenaldnHlk 22
                 K F+ +  l  Hl+
   KHJ30044.1 70 KRFSRSDELTRHLR 83
                 8999999*****96 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 1.9
                  CCTTSH CS
  zf-C2H2_jaz  19 nHlkSK 24 
                  +H++SK
   KHJ30044.1 173 AHCSSK 178
                  79**99 PP

>> FOXP-CC  FOXP coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.3      0.37   1.1e+03      10      28 ..      36      54 ..      34      61 .. 0.85
   2 ?   10.5   0.1   0.00025      0.75       6      37 ..      62      93 ..      59     118 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.37
     FOXP-CC 10 PgCekvledveeflkhlns 28
                P Cek ++ +e+ ++h+++
  KHJ30044.1 36 PLCEKSFHRLEHQTRHIRT 54
                88**********9999986 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00025
     FOXP-CC  6 vCkWPgCekvledveeflkhlnseHalddkst 37
                 C  PgC k ++ ++e+++hl+ + +++++  
  KHJ30044.1 62 RCSHPGCIKRFSRSDELTRHLRIHINPNSRRS 93
                7********************98777777655 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.9   0.00045       1.3       2      14 ..      33      45 ..      33      47 .. 0.92
   2 ?    2.4   0.6     0.057   1.7e+02       7      24 ..      68      85 ..      61      85 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00045
   zf-C2H2_6  2 heCsvCsksFpsl 14
                ++C+ C ksF+ l
  KHJ30044.1 33 YKCPLCEKSFHRL 45
                9*********976 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.057
   zf-C2H2_6  7 CsksFpslqaLggHkksH 24
                C k+F+  ++L+ H++ H
  KHJ30044.1 68 CIKRFSRSDELTRHLRIH 85
                88************9855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2908.68
//
Query:       KHJ30045.1  [L=115]
Description: hypothetical protein EV44_g3136 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.01   16.4   4.0      0.011   16.3   4.0    1.1  1  Dehydrin  Dehydrin


Domain annotation for each model (and alignments):
>> Dehydrin  Dehydrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   16.3   4.0   6.3e-07     0.011      36     120 ..      21     113 ..       4     115 .] 0.68

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 6.3e-07
    Dehydrin  36 tgalasttgettea......ttgtgaaaGaaaaagggqlqptreeeehktgeelrrsg.ssSSssSEDDGqG.GRrKKgikeKiKEKlpggkk 120
                 +g+ ++  g+++ +      + ++ ++ G++ ++++ + q ++e +e + +ee  rsg +sS   SE+DG G G +  gi+ K    ++ g++
  KHJ30045.1  21 GGQSSQYEGQQVIFdkdpitVDSQLTNCGEQFSSTAAKSQAKEEIDERERNEEKIRSGkASSLFTSEEDGGGvGEKTVGITGKANQGVTFGND 113
                 444444444444224566655666777888888888888888887777776666777757777889999988468999999998777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       730  (0.0407162); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 842.81
//
Query:       KHJ30046.1  [L=298]
Description: putative trna-dihydrouridine synthase 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.3e-54  183.2   0.0    7.6e-54  182.9   0.0    1.1  1  Dus       Dihydrouridine synthase (Dus)
    2.2e-05   23.8   0.0      4e-05   23.0   0.0    1.3  1  DHO_dh    Dihydroorotate dehydrogenase


Domain annotation for each model (and alignments):
>> Dus  Dihydrouridine synthase (Dus)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.9   0.0   8.4e-58   7.6e-54      53     225 ..      45     218 ..      25     255 .. 0.92

  Alignments for each domain:
  == domain 1  score: 182.9 bits;  conditional E-value: 8.4e-58
                 TSCEEEEEE-S-HHHHHHHHHHHHHTT-SCEEEEESSTTEEETTEEEGGGGGGSHHHHHHHHHHHHCCSSS-EEEEEESESSTTTC.HHHHHHHHHHCT CS
         Dus  53 etplavQlggsdpallaeaAklvadlgadeIdlNvGCPskkvtrggaGaaLlrkpdlvaqivkavvkaveiPvtvkirigiddeeenalelakiveaaG 151
                 ++pl vQ++++dp++l++aAk va+ ++d+IdlN+GCP+  +++g++Ga L ++++l+ ++v+ ++++++iPvtvkiri    ++e +l +a+ v +aG
  KHJ30046.1  45 DRPLFVQFCANDPNELLAAAKYVAP-YCDAIDLNLGCPQGIAKKGKYGAYLQEDQELIFSLVNVLHENLNIPVTVKIRILD--SKERTLAYAQNVLKAG 140
                 369**********************.***************************************************9974..58889*********** PP

                 -SEEEEESSECCCTT-C..G--CHHHHHHHHH-S..S-EEEESS--SHHHHHHHHHHH--SEEEESCHHCCSTTHHHH CS
         Dus 152 aqaltvHgRtraqnyeg..tadweaIkevkqavs..ipviaNGdIkdaedaqaileetGadgvmigrgalgnPwlfae 225
                 a  +tvHgRtr+ + ++   adw+ I+ ++++++  ++++aNG+I + +d+ ++le tGad++m ++g+l +P++fa+
  KHJ30046.1 141 ASIITVHGRTREMKGHKtgLADWSVIRFLRENLPsdTVIFANGNILKHKDLAHCLEVTGADAIMSAEGNLHDPAIFAS 218
                 ***********999988789********************************************************95 PP

>> DHO_dh  Dihydroorotate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   4.4e-09     4e-05     111     193 ..      57     144 ..      45     161 .. 0.77

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 4.4e-09
                 HHHHHHHHHHHGGGESEEEEES-SCT.....CCTSCCCGCHHHHHHHHHHHHHHHHSSEEEEEE-SSSSHHHHHHHHHHHHHHTECEE CS
      DHO_dh 111 vddyvevvrkigpfadilelNvSsPn.....tpglrdlqekeelkaillkvvkevskvpvlvKlaPdltdeekkdiadvllelkldgi 193
                  +++ + ++ ++p+ d++ lN+ +P       ++++ lqe++el   l++v++e+ ++pv vK+    ++e   + a+ +l+ + + i
  KHJ30046.1  57 PNELLAAAKYVAPYCDAIDLNLGCPQgiakkGKYGAYLQEDQELIFSLVNVLHENLNIPVTVKIRILDSKERTLAYAQNVLKAGASII 144
                 568899999****************743322357899***************************864444555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       345  (0.0192426); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2297.92
//
Query:       KHJ30047.1  [L=221]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1893.34
//
Query:       KHJ30048.1  [L=299]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.052   13.4   0.0        0.1   12.5   0.0    1.5  1  DUF2610   Domain of unknown function (DUF2610)


Domain annotation for each model (and alignments):
>> DUF2610  Domain of unknown function (DUF2610)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   5.7e-06       0.1      18      49 ..      75     106 ..      57     113 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 5.7e-06
     DUF2610  18 aiyigepkpdehPlefQadWlskeRggqvpee 49 
                 ++ +  pk  ++P + Q++W+  +R gq   +
  KHJ30048.1  75 NVAVATPKLPKPPQTSQNTWVTVARNGQKKVR 106
                 78999**********************96555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2273.73
//
Query:       KHJ30049.1  [L=159]
Description: hypothetical protein EV44_g3732 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1235.23
//
Query:       KHJ30050.1  [L=242]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       843  (0.0470188); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1895.12
//
Query:       KHJ30051.1  [L=97]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.022   14.6   0.8      0.037   13.9   0.8    1.5  1  zf-CCHC_6  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.8   2.1e-06     0.037       3      22 ..       5      23 ..       3      41 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.1e-06
   zf-CCHC_6  3 KCknCGAFGHtarSkrCPmk 22
                KC+nCG   H+  S+rC ++
  KHJ30051.1  5 KCRNCGG-PHRSDSRRCLIR 23
                9*****9.5********665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1171  (0.0653132); expected 358.6 (0.02)
Passed bias filter:                      546  (0.0304535); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 779.37
//
Query:       KHJ30052.1  [L=165]
Description: putative powdery mildew-specific protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.045   13.7   0.1       0.15   12.1   0.1    1.9  2  MinE      Septum formation topological specificity factor Min


Domain annotation for each model (and alignments):
>> MinE  Septum formation topological specificity factor MinE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.17   3.1e+03      35      44 ..      27      36 ..      20      56 .. 0.60
   2 ?   12.1   0.1   8.4e-06      0.15      25      59 ..     122     158 ..     103     164 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.17
                HHHHHH-..- CS
        MinE 35 viskYveide 44
                 i++++++ +
  KHJ30052.1 27 DIREFIQVTS 36
                3555555544 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 8.4e-06
                 CCHHHHHHHHHHHHHH-...-SEEEEEEE--.-E..E CS
        MinE  25 leqlkeeileviskYve.ideekvevkleke.kedvs 59 
                 ++  k+ei ++ skY++ i+++k+++ + +   ed++
  KHJ30052.1 122 VDLCKREIQNIFSKYINdISKKKIHFAIARGdLEDAP 158
                 66789***********66*********9965233445 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       764  (0.0426125); expected 358.6 (0.02)
Passed bias filter:                      621  (0.0346366); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1199.27
//
Query:       KHJ30053.1  [L=122]
Description: hypothetical protein EV44_g1699 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-17   63.9   2.6    1.3e-17   63.9   2.6    1.7  2  DASH_Hsk3  DASH complex subunit Hsk3 like


Domain annotation for each model (and alignments):
>> DASH_Hsk3  DASH complex subunit Hsk3 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.9   2.6   7.1e-22   1.3e-17       1      44 [.      35      78 ..      35      79 .. 0.96
   2 ?   -3.2   0.3      0.65   1.2e+04      16      22 ..     104     110 ..     103     114 .. 0.68

  Alignments for each domain:
  == domain 1  score: 63.9 bits;  conditional E-value: 7.1e-22
   DASH_Hsk3  1 qRqyshLasqLaqLqaNLadteellevtseQaesirkLGklhas 44
                +Rq++hL+s La+L+aNLa++e+ll++ts+Qaesi+ LG++h +
  KHJ30053.1 35 SRQLAHLHSNLATLSANLANLENLLRMTSIQAESIKGLGAWHCG 78
                6*****************************************65 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.65
   DASH_Hsk3  16 aNLadte 22 
                 +N+++t+
  KHJ30053.1 104 NNTSKTT 110
                 6888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1007  (0.056166); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 943.26
//
Query:       KHJ30054.1  [L=516]
Description: putative wsc domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-82  276.3   0.1    4.3e-82  275.6   0.1    1.3  1  DUF1996   Domain of unknown function (DUF1996)


Domain annotation for each model (and alignments):
>> DUF1996  Domain of unknown function (DUF1996)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  275.6   0.1   2.4e-86   4.3e-82       1     233 []      41     292 ..      41     292 .. 0.96

  Alignments for each domain:
  == domain 1  score: 275.6 bits;  conditional E-value: 2.4e-86
     DUF1996   1 DPivspgevsshvHtivGgsafnasltyeelrkskctscevkeDkSnYWvptLYfk.kengsferveqkggllvYYllekkk.ekkvtafpkgfrmiaG 97 
                 DP+vspg++s+h+H+i+G+s+f+++++y+el ++kctscev+eDkS+YW+p+LYf+ +++g+f+ v+q gg+l+YYll++++ ++++ +fp+gf+miaG
  KHJ30054.1  41 DPLVSPGTISEHIHAIHGSSGFSEKASYQELMNGKCTSCEVAEDKSAYWHPALYFQdATTGKFSLVPQVGGMLAYYLLHPNPgNTTLSSFPAGFQMIAG 139
                 9******************************************************98899******************998877778************ PP

     DUF1996  98 dptlr.....................ekslaqkaisftcleseekeeaeeetkelpkk..tkkkcasglraeilfpsCwdgknldspdhkshvaypskv 173
                 d+++r                     ++ l+q+a+ f+cl++++ +e++ ++++lp+k   +++c++g+r+e++fpsCw+g++   +++ +h+ayps+v
  KHJ30054.1 140 DTNQRnftypvpdiekslwnqppyntQAFLRQAALGFNCLNYNAPPEGALYRHFLPDKsfLDDNCPQGVRFELMFPSCWNGQREIPTNKMDHMAYPSQV 238
                 ********************99999888889999************************9989*********************889999*******999 PP

     DUF1996 174 eesegkCpeshpvrlpqlfyeviwdtekfnkkedgksqpfvlsngdktGyglHaDFinGW 233
                 +  +g+Cpe++p rlp+lfyeviwdt +f+    g++++fv++ngd+tGyg+H+DFi+GW
  KHJ30054.1 239 M--TGECPEGFPERLPSLFYEVIWDTYAFR----GQQGRFVIANGDPTGYGFHGDFIMGW 292
                 8..**************************8....6689********************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (516 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.38
# Mc/sec: 4033.79
//
Query:       KHJ30055.1  [L=310]
Description: putative elongation of fatty acids [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-62  209.4  16.4    7.7e-62  209.0  16.4    1.1  1  ELO       GNS1/SUR4 family


Domain annotation for each model (and alignments):
>> ELO  GNS1/SUR4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.0  16.4   4.3e-66   7.7e-62      10     249 ..      54     288 ..      47     289 .. 0.91

  Alignments for each domain:
  == domain 1  score: 209.0 bits;  conditional E-value: 4.3e-66
         ELO  10 iliallYlllvllgpklmknrkpfklkalvilhnlflavlSavgfvgmvkallevlkkkglvdllckddssdegrlrngllaflvllfylsKfvEllDT 108
                 + ++l+Y++lv+ g+++m+++++fk+++l+ +hn++l+++S +++v ++++l+ +l k+gl++ +c     ++  + + l+++++ + yl Kf+EllDT
  KHJ30055.1  54 VSMVLVYMILVMGGRQVMRDQPAFKFNTLFKIHNFVLTLVSGCLLVLFIEQLIPSLWKHGLFRNIC-----SSPGWSQPLVTLYY-INYLIKFYELLDT 146
                 6789**************************************************9999********.....44455555555555.666********** PP

         ELO 109 vflvlrkkqvsfLhvYHHatvmllmwaglrfatssgivfivllNsfvHaimYtYYflsalgakklvvpwkrliTslQilQfvvgllaavyllvsytlkk 207
                 +flvl+kk+++fLh+YHH ++++l+w++l  + ++  ++ ++lN+fvH++mY+YYf+sa g+   +v+wk++iT++Qi+Qf++ l +++y ++sy +  
  KHJ30055.1 147 IFLVLKKKPLTFLHCYHHPATAVLCWTQLAGS-TPISWLPITLNLFVHVVMYWYYFQSARGV---RVVWKKWITRFQIAQFIIDLGFVYYGTYSYIVDM 241
                 ********************************.66666666*****************6665...579**************************99999 PP

         ELO 208 ........vgCdtsqtpkaairlnllyllslllLFlnffiksylkkkkkk 249
                         ++Cd      +a+  + l+lls+l+LF++f+  +y k++++k
  KHJ30055.1 242 rwphlphlGTCDGA---PWAAVTGDLILLSYLILFISFYLATYRKQTSRK 288
                 9**********888...89**************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2251.49
//
Query:       KHJ30056.1  [L=230]
Description: hypothetical protein EV44_g3161 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-06   27.2   0.0    7.1e-06   26.2   0.0    1.4  1  rve       Integrase core domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0     4e-10   7.1e-06      67     114 ..      16      62 ..       3      66 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 4e-10
         rve  67 pervlsDngseytskafrefladlgirvsftrpgrpqdnGkvErfhrt 114
                  + +  D+gs +t + +r+f++  gi++++t  ++pq+n+  Er+++ 
  KHJ30056.1  16 TDSMSADRGSDWTGHFWRAFCKLTGITQRLTTSYHPQSNAS-ERANQE 62 
                 567889*********************************94.888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       640  (0.0356964); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1696.23
//
Query:       KHJ30057.1  [L=326]
Description: hypothetical protein EV44_g6196 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.9e-42  143.6   0.1    2.5e-40  138.5   0.1    2.1  1  DUF1295     Protein of unknown function (DUF1295)
  ------ inclusion threshold ------
      0.017   15.5   0.0       0.06   13.8   0.0    2.0  2  ICMT        Isoprenylcysteine carboxyl methyltransferase (ICM
      0.055   13.9   0.3       0.36   11.2   0.0    2.4  3  PEMT        Phospholipid methyltransferase
       0.12   11.2   0.0       0.17   10.6   0.0    1.3  1  ERG4_ERG24  Ergosterol biosynthesis ERG4/ERG24 family


Domain annotation for each model (and alignments):
>> DUF1295  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.5   0.1   5.5e-44   2.5e-40      23     235 .]      84     319 ..      72     319 .. 0.82

  Alignments for each domain:
  == domain 1  score: 138.5 bits;  conditional E-value: 5.5e-44
     DUF1295  23 vilavltlll....seaaklrrllvllLvvlWglRLalhllrrtlkkgeDkryeelrkelgktiallsllvvfvlQavllylvalpvllaaaskeeq.. 115
                 v  +++ +++    s++ ++r++++ + v +W+ RL+++l+ r+l +g+D r++e++++      +l++l  f +Qa ++ l  lpvl++++  ++   
  KHJ30057.1  84 VFPSLTRAFFeygaSNGFNWRQVVLSAAVSIWASRLGTYLFKRILADGHDSRFDEIKRS------PLQFLGAFFAQATWVSLCLLPVLAVNSIPNNLls 176
                 5555555555555456699*************************************994......46899********************997666577 PP

     DUF1295 116 ...alkaldviglalwlvgivlealaDqQlsaf...kkdpankgkvldsGLwrysRHPNYfgealiWwglflialea..............legl...e 191
                     + + d+igl l++ g+++e++aD Q++a+   kk  +   ++l+sGLw+ sRHPNYfgea +W g+   a+ +              ++g+   +
  KHJ30057.1 177 slpLIMTSDIIGLSLFVGGLAFEIIADGQKNAWvqaKKRKEHDEEFLTSGLWSKSRHPNYFGEATLWTGIATTAAGVlvsrvgqsviglnsVYGHilgL 275
                 77556899*************************988777777888************************987776653333322222211133321112 PP

     DUF1295 192 alaiagpllltlllvfvsgipllEkkalkkykdkeeyreYqkkt 235
                  l+ ++p ++t+ll++vsg+pl E k +kk++d+ +y++++++t
  KHJ30057.1 276 GLTFISPAFTTFLLLKVSGVPLSESKYDKKFGDRYDYQKWKRET 319
                 47889***********************************9986 PP

>> ICMT  Isoprenylcysteine carboxyl methyltransferase (ICMT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1         3   1.4e+04      12      27 ..     104     119 ..     102     128 .. 0.67
   2 ?   13.8   0.0   1.3e-05      0.06      30      52 ..     217     239 ..     189     258 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 3
        ICMT  12 rlvvmatlGeiwttrv 27 
                 r vv++ + +iw  r+
  KHJ30057.1 104 RQVVLSAAVSIWASRL 119
                 5666667777777665 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 1.3e-05
        ICMT  30 lpdhklvksglykylrHPnYllf 52 
                 + d +  +sgl++  rHPnY++ 
  KHJ30057.1 217 EHDEEFLTSGLWSKSRHPNYFGE 239
                 5688999**************84 PP

>> PEMT  Phospholipid methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.75   3.4e+03      62      86 ..     145     168 ..     142     173 .. 0.62
   2 ?   11.2   0.0   8.1e-05      0.36       4      68 ..     186     248 ..     183     263 .. 0.83
   3 ?   -2.0   0.0         1   4.6e+03      63      75 ..     272     284 ..     255     296 .. 0.52

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.75
        PEMT  62 gflGlaLitgsaaglllallvllvy 86 
                  flG+ ++  +++  l++l vl+v+
  KHJ30057.1 145 QFLGAFFAQATWV-SLCLLPVLAVN 168
                 5777777766666.55555555555 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 8.1e-05
        PEMT   4 ilGlllialglllvlssiealgefgtfygdfFlelmdklvtsGiYrylnnPeyvgstlgflGlaL 68 
                 i+Gl l++ gl  ++++i + +++ ++  +   e++++  tsG+++ +++P y+g    + G+a 
  KHJ30057.1 186 IIGLSLFVGGL--AFEIIADGQKNAWVQAKKRKEHDEEFLTSGLWSKSRHPNYFGEATLWTGIAT 248
                 55777777775..678899999999998888667777********************99999985 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 1
        PEMT  63 flGlaLitgsaag 75 
                 +lGl L + s+a 
  KHJ30057.1 272 ILGLGLTFISPAF 284
                 2333333333332 PP

>> ERG4_ERG24  Ergosterol biosynthesis ERG4/ERG24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   3.8e-05      0.17     349     424 ..     220     320 ..     205     326 .] 0.67

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 3.8e-05
  ERG4_ERG24 349 skLlvsGWyglarkinYlgDwlqslswsLatgfq...........................svlpyfyvly..FlvlLvhRelRDeekCkkkYGe..dw 416
                 ++ l+sG ++++r++nY+g+ ++       tg++                             l++  + +  Fl+l v      e k  kk+G+  d+
  KHJ30057.1 220 EEFLTSGLWSKSRHPNYFGEATLW------TGIAttaagvlvsrvgqsviglnsvyghilgLGLTFISPAFttFLLLKVSGVPLSESKYDKKFGDryDY 312
                 678****************97642......222222235567888888888888888777766777777762234444455566788888888872334 PP

  ERG4_ERG24 417 eeYkkkvp 424
                 +++k++ p
  KHJ30057.1 313 QKWKRETP 320
                 45555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2318.35
//
Query:       KHJ30058.1  [L=160]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-34  119.0   0.2    1.5e-34  118.5   0.2    1.3  1  TMEM234   Putative transmembrane family 234
    1.1e-05   25.7   1.8    0.00066   19.9   1.8    2.1  1  EamA      EamA-like transporter family
  ------ inclusion threshold ------
        4.6    6.9   7.7       0.26   10.9   2.0    1.9  2  PetM      PetM family of cytochrome b6f complex subunit 7


Domain annotation for each model (and alignments):
>> TMEM234  Putative transmembrane family 234
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.5   0.2   2.5e-38   1.5e-34       1     116 []      22     150 ..      22     150 .. 0.91

  Alignments for each domain:
  == domain 1  score: 118.5 bits;  conditional E-value: 2.5e-38
     TMEM234   1 lllvgilWGitnPllkrgskgleevkeksklsqlllelkf..............lllrlkyliplllNqsgSvlfflllgkadlslavpiaNslafvfT 85 
                 ++l+g+ WG t+P+++r++++ + v+++  l +l+ +                 ++ +++y+ipl++N++gS++ffll+gk+d+sl+vpi+Ns +f+fT
  KHJ30058.1  22 FILIGLAWGFTTPFIRRATRTHQPVQHP-LLDSLVVKNSWvrrhlcglffdivdVIKNPRYAIPLAINLTGSIWFFLLIGKTDMSLTVPITNSFSFLFT 119
                 689**********************998.333333332224667799999************************************************* PP

     TMEM234  86 vltelllgekvlkkktvlgmllvvvgialcv 116
                 v  ++ l +k+++++t++gm l++ gi+lcv
  KHJ30058.1 120 VAGDWYLDRKIISRDTWIGMSLTLGGIILCV 150
                 ******************************7 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   1.8   1.1e-07   0.00066       5     134 ..      20     148 ..      16     150 .. 0.72

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 1.1e-07
        EamA   5 llallaalfwaiyfvlskillrkvspl......tltf....vrfliagillliiallkegklaklslkdwllllllgllgtvlafllffyalkktsasn 93 
                 + ++l  l w++++++++++ r++ p+      +l++    vr  ++g+++ i+ ++        +   +++   l++  ++ + + ff ++ kt+ s 
  KHJ30058.1  20 IGFILIGLAWGFTTPFIRRATRTHQPVqhplldSLVVknswVRRHLCGLFFDIVDVI--------KNPRYAIP--LAI--NLTGSIWFFLLIGKTDMSL 106
                 567899999**************9888333343222232334444555555444444........33344444..443..566777889999******9 PP

        EamA  94 asli.tslePvftlilsvlllgekltlkqllgivlillGvll 134
                  ++i +s++ +ft+   ++l ++ ++  +++g+ l l G++l
  KHJ30058.1 107 TVPItNSFSFLFTVAGDWYLDRKIISRDTWIGMSLTLGGIIL 148
                 999967788888888888888*******************98 PP

>> PetM  PetM family of cytochrome b6f complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.0   4.3e-05      0.26      11      22 ..      20      31 ..      19      32 .. 0.88
   2 ?   -3.0   0.4      0.97   5.8e+03      11      17 ..     139     145 ..     137     148 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 4.3e-05
        PetM 11 fvLiLVGlAlGF 22
                ++ iL+GlA+GF
  KHJ30058.1 20 IGFILIGLAWGF 31
                577********* PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.97
        PetM  11 fvLiLVG 17 
                 ++L+L G
  KHJ30058.1 139 MSLTLGG 145
                 6788755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       349  (0.0194657); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1165.44
//
Query:       KHJ30059.1  [L=504]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.076   12.5   0.0       0.13   11.7   0.0    1.3  1  Casc1     Cancer susceptibility candidate 1
        2.7    8.0   6.4         68    3.5   5.0    2.7  2  DUF1451   Zinc-ribbon containing domain


Domain annotation for each model (and alignments):
>> Casc1  Cancer susceptibility candidate 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.5e-05      0.13      43      93 ..      96     143 ..      73     161 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.5e-05
       Casc1  43 iedslireWllqldieneiifsletklvryelyiskkeeeeakaargyvtd 93 
                 i +  +  W ++l i+ +ii+s++++l+++++ i+k   eea+a ++y  +
  KHJ30059.1  96 IRQRRELAWHARLLIRTTIISSIDSALANFQDEIEK---EEAVALKAYLRQ 143
                 44445567***************************4...778888888665 PP

>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.012   1.1e+02      28      53 ..     126     151 ..     112     157 .. 0.84
   2 ?    3.5   5.0    0.0076        68     117     143 ..     375     401 ..     372     405 .. 0.92

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.012
     DUF1451  28 aeeltkeelelvaeylkrDleeaars 53 
                 ++e++kee+  +++yl++ ++++a+ 
  KHJ30059.1 126 QDEIEKEEAVALKAYLRQAIASFAAT 151
                 57899***************999875 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.0076
     DUF1451 117 CekCgkelalkkteeippCpkCgateF 143
                 C++C+ ++  k+ ++ p C +Cg+t+ 
  KHJ30059.1 375 CKRCNGHHPAKNCSRAPSCGNCGSTNH 401
                 ***********************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (504 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       902  (0.0503096); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.22s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3743.69
//
Query:       KHJ30060.1  [L=116]
Description: hypothetical protein EV44_g0230 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       368  (0.0205254); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 860.74
//
Query:       KHJ30061.1  [L=182]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1402.52
//
Query:       KHJ30062.1  [L=251]
Description: hypothetical protein EV44_g3886 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-06   26.3   0.0    7.4e-06   25.8   0.0    1.1  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   4.1e-10   7.4e-06      74     221 ..      11     160 ..       4     175 .. 0.79

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 4.1e-10
       RVT_2  74 elvvhqldvdsafLna..eldeevyvkqPpGfeidreeekvykLnkslyGlkqapllWnekidk.vLkklgferseaesGlyvrgtgegklivalyvdd 169
                  + ++  d++ a+ ++  +l+ + ++k P    i   +e++ ++   lyG+  a++ W+ + +k  L  l+++ s+    l +      + iv+l  dd
  KHJ30062.1  11 SWKIYSRDISQAYTQSgtKLNRKFFIKAPKEISIG--DENILQVLLPLYGVPEAGTHWFARYHKwHLDALKLSTSSYDPCLMFGP----NSIVGLQTDD 103
                 699**********9973367888*******99998..8999******************99987358889999999998887765....568******* PP

       RVT_2 170 lliagsdi.kiledvkkel.akkfklkdlgkvsk.....fLGieiaqeaggiklslady 221
                  l a+++    +ed   el ++kfk kd+  +s+     f G++i+   + i ++++  
  KHJ30062.1 104 TLYASNQEyANFED--TELkKAKFKAKDIEILSEnfpmtFNGVNIKIVKDSICMTQQRQ 160
                 99877543034444..4441569******999864444478888888888888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       616  (0.0343577); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.20s 00:00:00.62 Elapsed: 00:00:00.36
# Mc/sec: 2081.56
//
Query:       KHJ30063.1  [L=326]
Description: putative telomere and ribosome associated protein elicitor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-14   54.4   0.9    1.7e-14   54.4   0.9    3.6  3  Stm1_N          Stm1
    5.9e-09   36.8   1.6    5.9e-09   36.8   1.6    3.1  4  HABP4_PAI-RBP1  Hyaluronan / mRNA binding family


Domain annotation for each model (and alignments):
>> Stm1_N  Stm1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.4   0.9   1.9e-18   1.7e-14       1      52 [.       4      53 ..       4      65 .. 0.86
   2 ?   -2.5   0.7       1.1   9.5e+03      57      64 ..      96     103 ..      79     109 .. 0.55
   3 ?   -8.4   9.7         2   1.8e+04      52      63 ..     269     280 ..     169     288 .. 0.67

  Alignments for each domain:
  == domain 1  score: 54.4 bits;  conditional E-value: 1.9e-18
      Stm1_N  1 vaskNlFDLLGdDdeeDpsqaapapppkevdkkstrsaKrptkpepPsqavr 52
                vaskNlF+LLG+ ++eD++ ++papp+k+v+k+ +r+ Kr+++ ep + ++ 
  KHJ30063.1  4 VASKNLFELLGNTHDEDSD-QEPAPPVKAVEKNVMRTSKRNAPDEPST-KTP 53
                8******************.9********************9999654.443 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.1
      Stm1_N  57 egarggrG 64 
                  g+++grG
  KHJ30063.1  96 RGSYEGRG 103
                 33333333 PP

  == domain 3  score: -8.4 bits;  conditional E-value: 2
      Stm1_N  52 rearnegarggr 63 
                 r +r+ g rggr
  KHJ30063.1 269 RGNRGGGFRGGR 280
                 223444555555 PP

>> HABP4_PAI-RBP1  Hyaluronan / mRNA binding family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2      0.97   8.7e+03      47      51 ..      31      35 ..      13      54 .. 0.35
   2 ?    0.1   0.1      0.16   1.4e+03       5      19 ..      73      88 ..      72     100 .. 0.77
   3 !   36.8   1.6   6.5e-13   5.9e-09       1     116 []     109     216 ..     109     216 .. 0.78
   4 ?   -0.8   0.8      0.29   2.6e+03      31      72 ..     225     246 ..     212     269 .. 0.40

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.97
  HABP4_PAI-RBP1 47 aaeke 51
                    a+ek+
      KHJ30063.1 31 AVEKN 35
                    11111 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.16
  HABP4_PAI-RBP1  5 fdRhSGtdr.gvknee 19
                    fdR  G+ +  +k+++
      KHJ30063.1 73 FDRNAGSAKnRLKPTD 88
                    9******997777765 PP

  == domain 3  score: 36.8 bits;  conditional E-value: 6.5e-13
  HABP4_PAI-RBP1   1 gkRefdRhSGtdrgvkneeKregagrgnWGtvkdeieeqeeeeaekaaekeaeeedaeeeaaeaeeaaaaeeeekeekeeeeeeeeedkemTLdE 95 
                     g R+fdRhS     v+++e++ ++g   WG+++  +e ++e++ e  a++e +e  a++ a++ +  a+ +++e  +     e e e++ +++ E
      KHJ30063.1 109 GPRNFDRHSRGV--VRDSERQVNHG---WGANEGVAELSDEQAGEALANAE-KEAAASWGANNISGGATDPKAEALP-----EAEPEENSISYAE 192
                     78*******663..47999999999...******99888777666433333.2333478888888888888888888.....5788********* PP

  HABP4_PAI-RBP1  96 ykklqeekr.alpef..nirkake 116
                     y  +q+ek+ al+++  +irk++e
      KHJ30063.1 193 YLLQQQEKKaALAAQtpQIRKPNE 216
                     *********888877667888875 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 0.29
  HABP4_PAI-RBP1  31 tvkdeieeqeeeeae..kaaekeaeeedaeeeaaeaeeaaaaee 72 
                      +k  ++e++e   +  +                      ++ +
      KHJ30063.1 225 NAKPITKEESEDFVQgaT----------------------TKVK 246
                     333322221111111210......................1111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       873  (0.0486921); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.37
# Mc/sec: 2617.94
//
Query:       KHJ30064.1  [L=506]
Description: putative m serotype protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.21   11.4  34.2       0.08   12.7  31.1    1.8  2  ERM            Ezrin/radixin/moesin family
        2.1    6.8   4.8        2.7    6.4   4.0    1.5  2  FUSC           Fusaric acid resistance protein family


Domain annotation for each model (and alignments):
>> ERM  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7  31.1   8.9e-06      0.08      12     192 ..      93     275 ..      82     298 .. 0.78
   2 ?   -1.5   0.0       0.2   1.8e+03      40      55 ..     469     484 ..     466     489 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 8.9e-06
         ERM  12 erLkqlqeeaekaqeaLreseetaelLaekarraeeeaelLeqkaaeaeeeiqrlkesaekeeeekeklerklreaeleaarleeeserkeeeaerLke 110
                 e L+ l e  +k +e  +e +++++ L+ ++++  +e+  Le+k  e ee i+ l+ ++++  ++k++le+  ++ ++ + + +ee +++eee +   +
  KHJ30064.1  93 ELLEDLSERLRKSEELSNEHQKQIQALQSRLEETTKEKVSLEEKVHENEERIEILENEKREAIRSKRELEAIYEAEKASVIKEREEASNREEELQMIIQ 191
                 447789999999999999********************************************************************************* PP

         ERM 111 eleeareaeeeakekllealstpskseseenveeseteeeeenseeesaeletde..veklsleieeeRvtylekskrlqeqLk 192
                 +l+e ++++ +  e+ ++  +++++s + en +  ++  + ++s ++s+ l +++  +e+l++e  e  ++ +e ++  +++L+
  KHJ30064.1 192 RLKESQNTQLNGDEEFRTNRRSNNTSPNLENGQFTTSGLNRSDSLNNSKLLLQKDrlIESLRMELAECQTKIVESENTGENRLQ 275
                 *********999999999999886654433333333333333333333333333346666666666666666666555555555 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.2
         ERM  40 ekarraeeeaelLeqk 55 
                 e arr+ee+a +L+++
  KHJ30064.1 469 EAARRSEEAAAKLAKR 484
                 4555556666555555 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   4.0    0.0003       2.7     248     335 ..      82     178 ..      52     194 .. 0.75
   2 ?   -2.8   0.0      0.19   1.7e+03     504     546 ..     244     285 ..     242     299 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0003
        FUSC 248 eeaaavpe.laallaelaal..eaaaaaealeaalaalrarlralrrale...adadtaalllarlaellaelaqllaslraleaaiaa...arrae 335
                 e++++++   a+ll++l +   ++++++++++++++al+ rl+++ ++     ++ + +++ ++ l ++ +e+++  ++l+a  +a +a   ++r+e
  KHJ30064.1  82 EPEDEPRNvNAELLEDLSERlrKSEELSNEHQKQIQALQSRLEETTKEKVsleEKVHENEERIEILENEKREAIRSKRELEAIYEAEKAsviKEREE 178
                 333333334556666666666658899***************9999999989999999999999999999999999999999988888777533333 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.19
        FUSC 504 larrllralrrdlaraasrpaaeaesrfesrmldrlaqllprl 546
                 + +rl+++lr +la+ ++++  e+e + e r+ d ++ ll ++
  KHJ30064.1 244 QKDRLIESLRMELAE-CQTKIVESENTGENRLQDIVLNLLDKD 285
                 568999999999995.677777778888888888888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2568  (0.143232); expected 358.6 (0.02)
Passed bias filter:                      637  (0.035529); expected 358.6 (0.02)
Passed Vit filter:                        98  (0.005466); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.83u 0.30s 00:00:01.12 Elapsed: 00:00:00.45
# Mc/sec: 3354.39
//
Query:       KHJ30065.1  [L=634]
Description: putative dna repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.3e-05   23.1   2.9        1.1    9.8   0.1    4.5  4  LRR_4     Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.011   15.9   1.5       0.03   14.5   1.5    1.7  1  FYVE      FYVE zinc finger
        0.1   12.9   1.0       0.23   11.8   1.0    1.6  1  DUF2039   Uncharacterized conserved protein (DUF2039)
        1.5    8.4  14.7       0.14   11.8   7.2    2.0  2  SR-25     Nuclear RNA-splicing-associated protein


Domain annotation for each model (and alignments):
>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.9    0.0011       5.1       1      38 [.     307     348 ..     307     356 .. 0.82
   2 !    7.8   0.2     0.001       4.6       2      30 ..     334     367 ..     333     372 .. 0.81
   3 !    9.8   0.1   0.00025       1.1       1      30 [.     387     419 ..     387     434 .. 0.85
   4 ?    0.1   0.0      0.27   1.2e+03      19      30 ..     590     601 ..     569     611 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0011
                 SS--EEE--S.....S---E-S-HHH.-TT--EEE-.-S----- CS
       LRR_4   1 pnLevLdLsn.....Nqltdipllek.lpnLkeLdLsgNnlitd 38 
                 p+ ++L L+n     N++ d  +l +   nL +LdL+g nli+d
  KHJ30065.1 307 PSIKHLKLRNaiqfkNKVMD--FLLGtTVNLISLDLHGANLIDD 348
                 67899999987777788888..75544*********99889976 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.001
                 S--EEE--S.S---E-S-...HHH.-TT--EEE- CS
       LRR_4   2 nLevLdLsn.Nqltdipl...lek.lpnLkeLdL 30 
                 nL++LdL++ N + d  +   l+k  ++L++L +
  KHJ30065.1 334 NLISLDLHGaNLIDDERWdnfLRKkATHLRTLKV 367
                 9*******768999*99977655559*****988 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00025
                 SS--EEE--SS.---E-S-.HHH.-TT--EEE- CS
       LRR_4   1 pnLevLdLsnN.qltdipl.lek.lpnLkeLdL 30 
                 p L+ L +s+N +++d +l +   l+nL +L+L
  KHJ30065.1 387 PELQRLKISHNlKVSDAGLePIAlLTNLDHLSL 419
                 68********88899988886677*******98 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.27
                 HHH-TT--EEE- CS
       LRR_4  19 leklpnLkeLdL 30 
                 ++++p+L+ L++
  KHJ30065.1 590 FRSCPKLRILTV 601
                 6789****9987 PP

>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   1.5   6.7e-06      0.03       7      57 ..     154     206 ..     151     240 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 6.7e-06
                 .--SB-TTT--B--SSS--EE-.TTT--.EE-STTS-EEE.EEGGGTEEEEEE CS
        FYVE   7 sevkkCeiCakkFsllrrrhhC.rlCGk.vvCekCssklvallekeaeeksvr 57 
                 +++++CeiC+k+F ++     C  + Gk ++C+kCss+  ++   e+++k+++
  KHJ30065.1 154 QQMTNCEICRKRFLVTFYSRSCpETQGKgLLCSKCSSSIERDKRAEKKRKPQK 206
                 5789*********776555566234454389******9999997777777665 PP

>> DUF2039  Uncharacterized conserved protein (DUF2039)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.0     5e-05      0.23      52      88 ..     154     190 ..     106     191 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5e-05
     DUF2039  52 tkkkkCvkCeektvkkaYhkiCkkCakekkvCakCsk 88 
                 ++ ++C+ C+++ + + Y + C +   +  +C+kCs+
  KHJ30065.1 154 QQMTNCEICRKRFLVTFYSRSCPETQGKGLLCSKCSS 190
                 57899******************************85 PP

>> SR-25  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   7.2     3e-05      0.14      43     122 ..      48     132 ..      18     152 .. 0.53
   2 ?    1.0   0.8     0.059   2.6e+02      82     103 ..     187     208 ..     163     220 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3e-05
       SR-25  43 sasekeeerskekkkkkrrrssssssssssssssssssssssssdd.....rkkrgkkkdkkkkkkkkkkkkkkekkkakekaka 122
                 ++ + ++++ +e +  +r +  ++ +s s    sss+++++++  +     ++++ ++k+k + +    k +k +k+++k k   
  KHJ30065.1  48 ASHNISAHQIREDAIARRAAAVAANNSQSVDEPSSSTATANTAAVEggienKEEKLRRKNKESTAIASIKASKSLKRRHKAKVSD 132
                 2222233444444444444444444444555555555444444333346445555555555555555559999999999965443 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.059
       SR-25  82 sssssddrkkrgkkkdkkkkkk 103
                   sss +r kr+ kk+k +k  
  KHJ30065.1 187 KCSSSIERDKRAEKKRKPQKLG 208
                 3333333444444444433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (634 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       979  (0.0546043); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4308.98
//
Query:       KHJ30066.1  [L=163]
Description: hypothetical protein EV44_g3565 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1181.87
//
Query:       KHJ30067.1  [L=512]
Description: putative hlh transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.8e-08   33.6   0.3    6.6e-08   32.4   0.3    1.6  1  HLH          Helix-loop-helix DNA-binding domain
     0.0012   19.1   0.7     0.0012   19.1   0.7    2.3  2  TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
     0.0045   16.0   5.0     0.0066   15.5   5.0    1.2  1  DUF4776      Domain of unknown function (DUF4776)
  ------ inclusion threshold ------
      0.037   13.2   6.7      0.062   12.5   6.7    1.3  1  HAP1_N       HAP1 N-terminal conserved region
      0.058   14.0   1.8       0.14   12.8   0.2    2.4  2  YabA         Initiation control protein YabA
       0.16   12.4   0.3       0.54   10.7   0.3    1.9  1  FlaC_arch    Flagella accessory protein C (FlaC)
        0.3   11.6   3.1       0.49   10.9   3.1    1.3  1  AAA_23       AAA domain
        1.6    9.3   6.7        1.3    9.6   1.2    2.4  2  APG6_N       Apg6 coiled-coil region
        2.2    8.0   5.8        1.7    8.4   1.2    2.3  2  DUF922       Bacterial protein of unknown function (DUF922)
        8.7    6.2   5.9         18    5.2   0.8    2.7  2  DivIC        Septum formation initiator


Domain annotation for each model (and alignments):
>> HLH  Helix-loop-helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.3   3.7e-11   6.6e-08       2      46 ..     346     389 ..     345     390 .. 0.95

  Alignments for each domain:
  == domain 1  score: 32.4 bits;  conditional E-value: 3.7e-11
                 HHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHH CS
         HLH   2 raahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAv 46 
                 r++h+++Er+RR ++++ ++ Lr l     +++K sK eiL kA+
  KHJ30067.1 346 RVSHKLAERKRRMEMKDMFDSLRALQS-VDRGAKASKWEILSKAI 389
                 89**********************977.89**************8 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.3       2.1   3.7e+03      36      62 ..     310     336 ..     302     371 .. 0.58
   2 !   19.1   0.7   6.4e-07    0.0012      12      54 ..     404     446 ..     385     456 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.1
  TMF_TATA_bd  36 erleaerdeareeivklmkeneelkel 62 
                  +  +++ +   +++v+l ++ e+l+++
   KHJ30067.1 310 KASKQNHNVQHRQVVELQNDGESLNNT 336
                  444444444455555555555555444 PP

  == domain 2  score: 19.1 bits;  conditional E-value: 6.4e-07
  TMF_TATA_bd  12 qlverlsseirrlEgElaslkeelerleaerdeareeivklmk 54 
                  + ++r++s+++r E+El+ ++++ +++  e  ++r+ei +l +
   KHJ30067.1 404 KAISRMESQLHRIEIELNDARRDSSNVRDENARLRSEITSLRT 446
                  689***********************************99865 PP

>> DUF4776  Domain of unknown function (DUF4776)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   5.0   3.7e-06    0.0066     102     252 ..     314     460 ..     244     483 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 3.7e-06
     DUF4776 102 lcedifkekeelkekikkvekkeeaqslkkkedfcvrnksseskrrkkLakvfselrdlydikkekkk.laeklkeeCeeaekkakkakkkrkakkklk 199
                 + +++  ++++++e +++ e+ +++q  +++++++v +k  e+krr ++  +f  lr l ++++ +k+ + e l +  +e+e++ak   +++ka + ++
  KHJ30067.1 314 QNHNV--QHRQVVELQNDGESLNNTQPYSRTPELRVSHKLAERKRRMEMKDMFDSLRALQSVDRGAKAsKWEILSKAITEHERQAKLIDDQKKAISRME 410
                 33333..2223333344444444899999***********************************99954888889999999999999999999999999 PP

     DUF4776 200 kklkekaikkattskkkkkkkkakkkkrrvkskrysflkpkekskkpkighks 252
                 ++l++  i+ + ++ + +++ +++ ++ r +s++ s+++p++++      h +
  KHJ30067.1 411 SQLHR--IEIELNDAR-RDSSNVRDENARLRSEITSLRTPRNRAYAGPESHPH 460
                 99998..555566554.445667777778999999988888877655555554 PP

>> HAP1_N  HAP1 N-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   6.7   3.5e-05     0.062     120     251 ..     315     446 ..     302     458 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.5e-05
      HAP1_N 120 rhelslkddLLqlysdseeeseeeseesee.lreeesleslqklvqldlLqeklreLeeeNekLreeasqLktetdtlEekEqqLvldcveqlseanqq 217
                 +h+++ ++  ++l  d e  ++++  ++++ lr +++l+++++ +++  + + lr L+   +  +    ++ ++++t  e+ ++L+ d  + +s  ++q
  KHJ30067.1 315 NHNVQHRQ-VVELQNDGESLNNTQPYSRTPeLRVSHKLAERKRRMEMKDMFDSLRALQSVDRGAKASKWEILSKAITEHERQAKLIDDQKKAISRMESQ 412
                 56666553.5555555555555555555666899999999999********************9999999999999999999***************** PP

      HAP1_N 218 iaelseelarkleelerqqeeissLlaqivdlqq 251
                 +++++ el+  + + ++ ++e ++L+++i++l++
  KHJ30067.1 413 LHRIEIELNDARRDSSNVRDENARLRSEITSLRT 446
                 ******************************9986 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0         3   5.3e+03       1      18 [.     358     375 ..     358     404 .. 0.62
   2 ?   12.8   0.2   7.8e-05      0.14       8      52 ..     404     448 ..     399     473 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 3
                 X-HHHHHHHHHHHHHHHH CS
        YabA   1 mdkkelfdkleeleeqle 18 
                 m+ k++fd+l++l++  +
  KHJ30067.1 358 MEMKDMFDSLRALQSVDR 375
                 788999999998876433 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 7.8e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA   8 dkleeleeqleelleeleelkeelaelleenaeLeleneklrerl 52 
                 ++++++e+ql+++  el++ +++ +++ +ena+L+ e ++lr+  
  KHJ30067.1 404 KAISRMESQLHRIEIELNDARRDSSNVRDENARLRSEITSLRTPR 448
                 67999************************************9865 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.3    0.0003      0.54       2      38 ..     406     442 ..     405     445 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.0003
   FlaC_arch   2 idelEnklsklsteletvkkeneelsksveelkenVk 38 
                 i  +E++l ++++el+ ++++ ++++++  +l  ++ 
  KHJ30067.1 406 ISRMESQLHRIEIELNDARRDSSNVRDENARLRSEIT 442
                 5679************************999988775 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   3.1   0.00028      0.49      99     194 ..     321     422 ..     240     434 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00028
      AAA_23  99 kkgkttkkaklellei....deleqfisellgskkiilnlilflgqer.feefelkdkkerleelekeleeledekkllekleqeke.kekeleeleee 191
                  + ++ +++ ++l ++    ++ e ++s++l  +k+++++ +++++ r  +  ++ +k +++e l+k++ e e ++kl+++++++ +  e +l+ +e e
  KHJ30067.1 321 RQVVELQNDGESLNNTqpysRTPELRVSHKLAERKRRMEMKDMFDSLRaLQSVDRGAKASKWEILSKAITEHERQAKLIDDQKKAISrMESQLHRIEIE 419
                 222333333333333344556667788889999999999999999999777777799999********************9976555133366666655 PP

      AAA_23 192 lee 194
                 l++
  KHJ30067.1 420 LND 422
                 555 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.4      0.13   2.4e+02      96     126 ..     307     337 ..     300     342 .. 0.81
   2 ?    9.6   1.2   0.00072       1.3      44      89 ..     391     446 ..     351     472 .. 0.70

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.13
      APG6_N  96 eeeerfwreynelqlelleleeeldsleaqy 126
                  e ++  + +n +++++ el+++ +sl++  
  KHJ30067.1 307 SEYKASKQNHNVQHRQVVELQNDGESLNNTQ 337
                 566677788999***************9976 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00072
      APG6_N  44 k..........qdeeleeleeeleklekeeeelleeLkelekereeleaelaalee 89 
                 +          q++ + + e +l ++e e +++ +   ++ +e+++l++e+ +l+ 
  KHJ30067.1 391 EherqakliddQKKAISRMESQLHRIEIELNDARRDSSNVRDENARLRSEITSLRT 446
                 02222333444677788888888888888888888888888888888888877765 PP

>> DUF922  Bacterial protein of unknown function (DUF922)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   1.2   0.00096       1.7      77     151 ..     377     458 ..     368     463 .. 0.80
   2 ?    1.4   0.3      0.13   2.4e+02      67     107 ..     465     506 ..     460     509 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00096
      DUF922  77 elrekWdtllaalerHEevHgei..akeaareiekalksl.....ppdpdCeklkeevtkrlqaileehrqaqrdfDrvenh 151
                 + + kW+ l++a+++HE++ + i   k+a +++e +l  +      +++d +++++e  ++ ++i+     ++r++   e+h
  KHJ30067.1 377 AKASKWEILSKAITEHERQAKLIddQKKAISRMESQLHRIeielnDARRDSSNVRDENARLRSEITSLRTPRNRAYAGPESH 458
                 56789*************9887743577888888888877777777788899999999999999988888888888776655 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.13
      DUF922  67 Prl.esakaspelrekWdtllaalerHEevHgeiakeaarei 107
                 P + ++++++p  + +  + +++++ H e+H e++ +  ++i
  KHJ30067.1 465 PGIeQKSQLPPFRSLQVPEVMNGVQYHHEQHSEHVMNKPQSI 506
                 666667777777778888999*************99877666 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.4     0.062   1.1e+02      16      44 ..     306     334 ..     301     338 .. 0.83
   2 ?    5.2   0.8    0.0099        18      18      51 ..     412     445 ..     387     453 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.062
                 XXHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       DivIC  16 llaykqlkqeiaalqaelaklkaeneeLe 44 
                  + yk+ kq+ + + +++++l+++ e+L+
  KHJ30067.1 306 SSEYKASKQNHNVQHRQVVELQNDGESLN 334
                 57889999999999999999999999986 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0099
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-X CS
       DivIC  18 aykqlkqeiaalqaelaklkaeneeLeaevkdLk 51 
                 ++++++ e+++  ++  ++++en++L +e+  L+
  KHJ30067.1 412 QLHRIEIELNDARRDSSNVRDENARLRSEITSLR 445
                 6677888899999999999***********9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1181  (0.0658709); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 3714.58
//
Query:       KHJ30068.1  [L=344]
Description: putative egh16h1-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-67  226.7  10.2    4.4e-67  226.0  10.2    1.3  1  Egh16-like  Egh16-like virulence factor


Domain annotation for each model (and alignments):
>> Egh16-like  Egh16-like virulence factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.0  10.2   2.5e-71   4.4e-67       2     183 .]      19     252 ..      18     252 .. 0.99

  Alignments for each domain:
  == domain 1  score: 226.0 bits;  conditional E-value: 2.5e-71
  Egh16-like   2 aHgvitkvtGangvngpglgvadgtprdgtsrasgsqaDttvfrdkeikkkkasglGrtlgsgkvniaaeiaklm........................ 76 
                 +Hgvi +vtGan+v++pglgv d+tprd++s+++gs+aDt+++rd+e++++kas+lGrt+g+g+v++++++a +m                        
  KHJ30068.1  19 SHGVIDSVTGANKVQMPGLGVIDDTPRDCASPRCGSEADTSIIRDRELGTNKASALGRTQGGGPVDASKMVALFMgsggnstatkkarevhaanmmrrs 117
                 7************************************************************************************************** PP

  Egh16-like  77 ..........................agaesglptvsaggtltmtvhqvnqDGaGpltckiDststgtdakalqkaevtknvpGk..gglsaakntdfp 147
                                           aga+sglpt++++gt+tm +hqvnqDGaGplt+++D ts+gtd++a+qka+vtknvpG   gglsaa+ +dfp
  KHJ30068.1 118 lavraanggtktpkgsketgvkaaagAGASSGLPTAADDGTVTMNFHQVNQDGAGPLTAMVDGTSGGTDKAAFQKATVTKNVPGIgiGGLSAASVMDFP 216
                 ************************99999******************************************************9999************ PP

  Egh16-like 148 lkvqlpagltCtGtvggaknvCivRceNaakaGPFG 183
                 ++v++pag+tC++tv+g++nvC+++++N+a+aGPFG
  KHJ30068.1 217 VEVKMPAGMTCDATVAGVDNVCVMKLQNKAAAGPFG 252
                 ***********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       886  (0.0494171); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2747.31
//
Query:       KHJ30069.1  [L=242]
Description: putative ran binding protein in the microtubule-organising centre [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-33  116.0   0.0    2.1e-33  115.3   0.0    1.3  1  CLTH      CTLH/CRA C-terminal to LisH motif domain
    2.8e-08   33.4   0.0    5.7e-08   32.4   0.0    1.6  1  LisH      LisH


Domain annotation for each model (and alignments):
>> CLTH  CTLH/CRA C-terminal to LisH motif domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.3   0.0   2.3e-37   2.1e-33       2     145 ..      66     213 ..      65     216 .. 0.92

  Alignments for each domain:
  == domain 1  score: 115.3 bits;  conditional E-value: 2.3e-37
        CLTH   2 ikerqkIiklilegdlseaiewinenkpellesnsnLeFkLkllqfielirg.....ktkdieealeyarenle...fendehlkelekamsLLafsdp 92 
                 i  r++Ii++i++gd+++ai++ine++pe+l++n++L+F+L++l+++elir+       +di+ al++a e+l+   + nd+++++lek+m+LL+f+++
  KHJ30069.1  66 IHARHSIIHSIHSGDVQKAINTINELDPEVLDRNPSLHFDLLRLHLVELIRNcnsnpG-GDITPALAFAAEELApraPSNDSFMEDLEKTMTLLVFPSD 163
                 6789***********************************************8766655.89************64677777*****************6 PP

        CLTH  93 eskelssplknlldpsrrekvakefnsailkllglskespLeillsaglsalk 145
                 +       l  ll+ps+r kva+ +n ail  ++  ke+ +  l+++ ++a  
  KHJ30069.1 164 KL---EPDLVVLLEPSLRRKVAEKVNMAILGRQKSQKEATIRKLIRLRAWAED 213
                 55...779**************************************9999875 PP

>> LisH  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.0   6.4e-12   5.7e-08       2      27 .]      30      55 ..      29      55 .. 0.97

  Alignments for each domain:
  == domain 1  score: 32.4 bits;  conditional E-value: 6.4e-12
                HHHHHHHHHHHHCT-HHHHHHHHHHT CS
        LisH  2 eLNrLIydYLvkeGyeetAeaFekEa 27
                ++N LI+dYL keGy  +A++F kEa
  KHJ30069.1 30 DINKLILDYLTKEGYPLAAAKFSKEA 55
                89***********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1958.92
//
Query:       KHJ30070.1  [L=351]
Description: hypothetical protein EV44_g3856 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-08   35.3   0.0    2.1e-08   34.4   0.0    1.4  1  rve              Integrase core domain
     0.0037   17.1   1.3     0.0037   17.1   1.3    2.2  2  gag_pre-integrs  GAG-pre-integrase domain
  ------ inclusion threshold ------
       0.35   11.0   1.9        2.7    8.2   1.9    2.3  1  Integrase_H2C2   Integrase zinc binding domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.0   3.5e-12   2.1e-08       6     116 ..     194     308 ..     190     310 .. 0.89

  Alignments for each domain:
  == domain 1  score: 34.4 bits;  conditional E-value: 3.5e-12
         rve   6 elwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggve...........pervlsDngseytskafrefladlgir 93 
                 + + vDv++++    g  + +l+vvd ++r+  a  l+++ ++s++ ++l++  +  +g+            p++++ D g+++ts++fr+++ +l i+
  KHJ30070.1 194 HSIFVDVMYID----G--SPILHVVDEATRFQAAKWLKNM-SSSHIWNMLRACWSLVKGKAcnswidvylgpPDIINHDAGTSFTSHEFRQYAMSLSIK 285
                 56788888888....5..68999********999888888.9********96666667766************************************** PP

         rve  94 vsftrpgrpqdnGkvErfhrtlk 116
                  + +++ +p++   vEr h  ++
  KHJ30070.1 286 TKEAPVESPNTISFVERYHTPFR 308
                 ******************98766 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.25   1.5e+03      29      34 ..     105     110 ..     103     114 .. 0.86
   2 !   17.1   1.3   6.3e-07    0.0037      17      64 ..     122     174 ..     114     175 .. 0.70

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.25
  gag_pre-integrs  29 rRLGHp 34 
                      rR+GHp
       KHJ30070.1 105 RRFGHP 110
                      8****9 PP

  == domain 2  score: 17.1 bits;  conditional E-value: 6.3e-07
  gag_pre-integrs  17 lsknkssinlWHrRLGHpsfsrlkkLfk.........kgllpglkisksevCeaCql 64 
                      +  ++++++  HrR+GHps  +l +L +         +    +l ++ +++C+ Cq+
       KHJ30070.1 122 CYLTETELRTLHRRFGHPSAIKLVNLLDkaghedpqhR----RLLENINKHCDKCQK 174
                      445789999************99999984333332222....333344789*99996 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   1.9   0.00045       2.7       9      55 ..     128     175 ..     123     177 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00045
  Integrase_H2C2   9 ilkeaHdsagHlGiektlerlrrryyW.pgmrkdvkkyvksCetCqrr 55 
                      l+ +H   gH+++ k  ++l +  +  p+ r+  +++ k+C++Cq++
      KHJ30070.1 128 ELRTLHRRFGHPSAIKLVNLLDKAGHEdPQHRRLLENINKHCDKCQKY 175
                     5899999999999999999998887744999999************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2792.60
//
Query:       KHJ30071.1  [L=67]
Description: putative 40s ribosomal protein s28 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.2e-31  107.1   2.3    3.6e-31  107.0   2.3    1.0  1  Ribosomal_S28e  Ribosomal protein S28e


Domain annotation for each model (and alignments):
>> Ribosomal_S28e  Ribosomal protein S28e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.0   2.3     2e-35   3.6e-31       3      64 .]       7      66 ..       5      66 .. 0.97

  Alignments for each domain:
  == domain 1  score: 107.0 bits;  conditional E-value: 2e-35
                    -EEEEEEEEEE---SSSSEEEEEEEE-S-SS-S-EEEEEEES---TT-EEEES--S--TT-- CS
  Ribosomal_S28e  3 aklAeVikvlgrtGsrGevtqVrvellegkdkgriiiRnVkGPvreGDiLtLlEterEArrL 64
                    +kl +Vi+vlgrtGsrG+vtqVrve+++++   r+iiRnVkGPvre+DiL+LlE+erEArrL
      KHJ30071.1  7 VKLVKVIRVLGRTGSRGGVTQVRVEFMDDT--TRSIIRNVKGPVREDDILCLLESEREARRL 66
                    78889************************8..*****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       237  (0.0132188); expected 358.6 (0.02)
Passed bias filter:                      205  (0.011434); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.25s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 524.03
//
Query:       KHJ30072.1  [L=304]
Description: hypothetical protein EV44_g4100 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00018   21.3   0.3    0.00032   20.5   0.3    1.4  1  Chromo    Chromo (CHRromatin Organisation MOdifier) domain


Domain annotation for each model (and alignments):
>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.3   1.8e-08   0.00032       1      52 [.      70     119 ..      70     121 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 1.8e-08
                 EEEEEEEEEEEETTEEC..EEEEEEETTSTGGGTEEEEGGGCSSHSHHHHHHHH CS
      Chromo   1 yeVerIidhrtdkdgle..leYlVKWkglpysentWEpeenlekcfqelideFk 52 
                 ++Ve+I++ ++++ g++   e lVKWk++   e  WE ++nle+   e++d F+
  KHJ30072.1  70 QVVEKILGAEKKRRGRGyrREVLVKWKQFE--EPNWELRTNLEDT--EALDVFE 119
                 68*****888888888889*********96..568********98..6688776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       254  (0.014167); expected 358.6 (0.02)
Passed bias filter:                      236  (0.013163); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 2445.75
//
Query:       KHJ30073.1  [L=537]
Description: putative protein kinase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-61  207.8   0.0    2.7e-61  207.2   0.0    1.2  1  Pkinase         Protein kinase domain
    2.7e-31  108.8   0.0    3.9e-31  108.3   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
    1.5e-06   27.7   0.0    2.5e-06   27.0   0.0    1.3  1  Kinase-like     Kinase-like
    4.4e-05   22.4   0.0    7.4e-05   21.7   0.0    1.2  1  Pkinase_fungal  Fungal protein kinase
    8.6e-05   22.0   0.0    0.00014   21.3   0.0    1.3  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0046   16.9   0.4      0.013   15.4   0.3    1.8  1  APH             Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.036   14.0   0.8       0.12   12.3   0.8    2.0  1  A1_Propeptide   A1 Propeptide


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  207.2   0.0   1.1e-64   2.7e-61       2     255 ..      20     263 ..      19     278 .. 0.91

  Alignments for each domain:
  == domain 1  score: 207.2 bits;  conditional E-value: 1.1e-64
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                 + l+ +G+G+fGkV  + +k+tg ++A+K i+k +  k++  +++lrE ++l++l+ ++i++l ++f++ +++ylv+++++gg+l  +++ +++++ee 
  KHJ30073.1  20 RLLRVVGRGAFGKVRIVERKDTGLTFALKYIRKADVIKSESvRNILRERRMLEQLNYQFICNLRYSFQDIEYMYLVVDLMDGGDLRFHIS-RKTFTEEA 117
                 56789*****************************99999989***********************************************8.599***** PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STT CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfs 198
                 ++++++++  +l+y+Hs+gi+HrD+Kp+N+L+d +g++ ++DF +a+ ++ ++klts  gt  YlAPEvlk+n+ys  +D+WslGv++ye +++k pf+
  KHJ30073.1 118 VRFWISELGLALRYIHSQGIVHRDIKPDNVLLDAEGHVHLADFNVASDITPGKKLTSKSGTLAYLAPEVLKGNGYSFGADWWSLGVLFYECIYNKRPFE 216
                 *************************************************************************************************** PP

                 TSSHHHHHHHHHHTHHHHHHHCTSHH...H.HHTTS-HHHHHHHHHHT-SSGCCSTTH CS
     Pkinase 199 gekgkekvekeldqlekilkilgetkeklp.easeiseeakdllkkllkkdpkkRlta 255
                 + ++    ++e+ q          ++ k+p ++  +s  + + +++ l++dp+kR+++
  KHJ30073.1 217 KLNSAG-LKAEILQ----------VNPKFPlTDPPVSIACMHAISSALEEDPNKRMGC 263
                 544444.3333333..........2445551345689******************985 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.3   0.0   1.5e-34   3.9e-31       3     249 ..      21     260 ..      19     264 .. 0.85

  Alignments for each domain:
  == domain 1  score: 108.3 bits;  conditional E-value: 1.5e-34
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST..TSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlke..eateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  l + +G+GafGkV   + k    ++ ++ a+K +++    ++e+ +++l+e +++++l+ + i +l     + e +++v+++++gGdL+ ++ +k   
   KHJ30073.1  21 LLRVVGRGAFGKVRIVERK----DTGLTFALKYIRKadVIKSESVRNILRERRMLEQLNYQFICNLRYSFQDIEYMYLVVDLMDGGDLRFHISRK--- 111
                  6789*********998888....999********541134566699**********************************************998... PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllw 196
                  ++t + +  ++ ++  +++y++s+ +vHrd+   NvLl+ + +v ++Df +a+di+  ++ +   ++   + ++apE+lk + ++  +D Ws Gvl +
   KHJ30073.1 112 TFTEEAVRFWISELGLALRYIHSQGIVHRDIKPDNVLLDAEGHVHLADFNVASDITPGKKLT---SKSGTLAYLAPEVLKGNGYSFGADWWSLGVLFY 206
                  889888889999*******************************************6555554...5556789************************** PP

                  HHHTTSSGTTTTSHHHHHHHHH.HTTEE..S-BBTTSBHHHHHHHHHHT-SSGGGS CS
  Pkinase_Tyr 197 Eiftlgespypglkneevlekl.kegkr..lekpekcpeelyelmkkcweedpeeR 249
                  E +   ++p+++l+++ + + + + + +  l+ p  ++ + ++ +++ +eedp++R
   KHJ30073.1 207 ECIY-NKRPFEKLNSAGLKAEIlQVNPKfpLTDPP-VSIACMHAISSALEEDPNKR 260
                  *998.89******8888777663333332144444.55556666778888888877 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   9.7e-10   2.5e-06     158     256 ..     130     221 ..     101     235 .. 0.80

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 9.7e-10
  Kinase-like 158 anLqakglvhgkftvdnllldekgglmlggft..aLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPltla 253
                   +++++g+vh ++++dn+lld +g + l +f+  + ++ g+k    +   ++  pE+l   +         ++++ d W lG+  y     k P+++ 
   KHJ30073.1 130 RYIHSQGIVHRDIKPDNVLLDAEGHVHLADFNvaSDITPGKKLTSKSGTLAYLAPEVLKG-N--------GYSFGADWWSLGVLFYECIYNKRPFEKL 218
                  5889**************************972245789999996555588999999877.3........479*************999999999887 PP

  Kinase-like 254 tee 256
                   + 
   KHJ30073.1 219 NSA 221
                  665 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   2.9e-08   7.4e-05     319     396 ..     129     197 ..     127     210 .. 0.83

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 2.9e-08
  Pkinase_fungal 319 hrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHsyrhD 396
                     +r  +  +gi+HrDi  +N+l+      +e +  L+D+++a+++   +   +   + GTl+++a evlkg+  s+  D
      KHJ30073.1 129 LRYIH-SQGIVHRDIKPDNVLLD-----AEGHVHLADFNVASDITPGK---KLTSKSGTLAYLAPEVLKGNGYSFGAD 197
                     56667.89**************9.....78999************633...34579*************988777655 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   5.3e-08   0.00014     104     180 ..     103     174 ..      60     201 .. 0.85

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 5.3e-08
         Kdo 104 dLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldkarlrlradrwre 180
                 dL  ++ + +++ ee  r  + ++g + + +h+ g+ H+d+ + n+ll++e+    ++ l D++ a   +++++  +
  KHJ30073.1 103 DLRFHISR-KTFTEEAVRFWISELGLALRYIHSQGIVHRDIKPDNVLLDAEG----HVHLADFNVASDITPGKKLTS 174
                 66666665.6688888899999******************************....********9999999888654 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.3   5.3e-06     0.013     164     196 ..     133     163 ..     105     169 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 5.3e-06
                 S-EEEE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 164 lptvllHgDlhpgNllvdpddgrvtGviDfeda 196
                  +++++H+D++p+N+l+d++++    + Df  a
  KHJ30073.1 133 HSQGIVHRDIKPDNVLLDAEGHVH--LADFNVA 163
                 4789**************555444..6666655 PP

>> A1_Propeptide  A1 Propeptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.8   4.6e-05      0.12       8      25 ..      57      74 ..      56      75 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 4.6e-05
                   E---HHHHHHHTT-HHHH CS
  A1_Propeptide  8 KvKSmRetLrEkglLeeF 25
                   K +S+R++LrE+ +Le++
     KHJ30073.1 57 KSESVRNILRERRMLEQL 74
                   789*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (537 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       765  (0.0426683); expected 358.6 (0.02)
Passed bias filter:                      496  (0.0276647); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.39
# Mc/sec: 4170.36
//
Query:       KHJ30074.1  [L=917]
Description: putative transcriptional corepressor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-51  170.7  32.8    6.5e-08   32.1   0.0   11.3 11  TPR_1       Tetratricopeptide repeat
    1.4e-43  143.4  26.1    1.6e-05   24.7   1.9   10.9 11  TPR_2       Tetratricopeptide repeat
    4.1e-36  120.2  19.4    2.3e-06   27.4   0.0   11.0 10  TPR_8       Tetratricopeptide repeat
    7.7e-28   94.9  20.1    6.6e-05   23.0   0.1   10.2 10  TPR_17      Tetratricopeptide repeat
    1.1e-25   90.0   7.8    2.4e-06   28.1   0.1    7.1  7  TPR_16      Tetratricopeptide repeat
    6.3e-24   83.4  31.4    2.5e-06   27.0   0.5    9.7  9  TPR_11      TPR repeat
    1.3e-23   83.3  18.8    5.5e-05   23.6   0.2    6.4  6  TPR_19      Tetratricopeptide repeat
    5.4e-22   76.6  10.8     0.0017   19.0   0.0    9.1 10  TPR_14      Tetratricopeptide repeat
    8.2e-20   70.9  27.3    6.3e-06   26.4   1.0    7.7  7  TPR_12      Tetratricopeptide repeat
    4.7e-18   65.1  13.7     0.0015   18.6   0.1    7.2  7  TPR_9       Tetratricopeptide repeat
    1.5e-17   63.0  22.2     0.0016   19.0   0.0    9.7 10  TPR_6       Tetratricopeptide repeat
      2e-14   52.4  12.7      0.022   14.7   0.1    9.1  9  TPR_7       Tetratricopeptide repeat
    8.9e-12   44.8  12.8    0.00015   21.1   4.4    5.0  3  TPR_15      Tetratricopeptide repeat
      2e-11   43.9  18.7    1.1e-06   28.8   2.7    3.8  4  ANAPC3      Anaphase-promoting complex, cyclosome, subunit 3
    2.6e-08   33.8   8.0      0.057   13.1   0.0    5.1  5  TPR_21      Tetratricopeptide repeat-like domain
    7.5e-08   31.8   3.1    0.00049   19.2   0.1    3.3  3  ChAPs       ChAPs (Chs5p-Arf1p-binding proteins)
    8.3e-06   26.3  12.0       0.13   12.7   0.3    4.2  4  BTAD        Bacterial transcriptional activator domain
    3.7e-05   24.0   4.7      0.065   13.6   0.0    4.6  4  TPR_20      Tetratricopeptide repeat
     0.0016   17.9   6.5      0.089   12.1   0.7    3.8  2  TPR_MalT    MalT-like TPR region
     0.0026   17.5   4.3       0.83    9.3   0.0    3.2  3  DUF2225     Uncharacterized protein conserved in bacteria (DU
  ------ inclusion threshold ------
      0.021   14.9   2.9        2.8    8.1   0.0    4.9  6  Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
       0.71    9.3  17.7        6.8    6.0   0.3    4.8  3  SNAP        Soluble NSF attachment protein, SNAP
        5.2    7.2  21.2         12    6.0   1.4    7.0  7  MIT         MIT (microtubule interacting and transport) domai


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   0.00019      0.15       3      33 ..      47      77 ..      46      78 .. 0.94
   2 !    9.8   0.0   0.00094      0.73      11      34 .]      89     112 ..      88     112 .. 0.94
   3 !   21.9   0.2   1.3e-07   0.00011       2      29 ..     114     141 ..     113     145 .. 0.93
   4 !   17.6   0.0   3.1e-06    0.0024       1      34 []     149     182 ..     149     182 .. 0.95
   5 !   17.1   0.2   4.6e-06    0.0036       2      25 ..     187     210 ..     187     215 .. 0.93
   6 !   27.3   0.0   2.8e-09   2.2e-06       2      34 .]     224     256 ..     223     256 .. 0.96
   7 ?    0.7   0.0       0.7   5.5e+02       1      16 [.     257     272 ..     257     273 .. 0.88
   8 ?    1.7   0.0      0.34   2.6e+02      18      33 ..     278     293 ..     275     294 .. 0.87
   9 !   27.8   2.4   1.9e-09   1.5e-06       1      33 [.     295     327 ..     295     328 .. 0.92
  10 !   32.1   0.0   8.4e-11   6.5e-08       3      32 ..     331     360 ..     329     361 .. 0.96
  11 !   14.9   1.1   2.3e-05     0.018       2      34 .]     364     397 ..     363     397 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00019
                HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1  3 alynlGnayfklgkydeAleyyekALelnPn 33
                ++ ++G +   l+ ++eA  +ye AL+ nP 
  KHJ30074.1 47 VWLQIGSLAEVLNCPEEAMNAYEHALRANPR 77
                6999*************************96 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00094
                 HHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  11 yfklgkydeAleyyekALelnPnn 34 
                 +++++++ +A+ey +  L+++Pnn
  KHJ30074.1  89 LRSQEQFLKAVEYLQNILKVEPNN 112
                 7899*******************8 PP

  == domain 3  score: 21.9 bits;  conditional E-value: 1.3e-07
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALe 29 
                 +++  lG++y+ + ++++A  +y++AL 
  KHJ30074.1 114 EVWGSLGHCYLMMDDLQQAYTAYQQALY 141
                 68************************96 PP

  == domain 4  score: 17.6 bits;  conditional E-value: 3.1e-06
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnPnn 34 
                 +k +y++G +y + g +d A+e+++++ + +P++
  KHJ30074.1 149 PKLWYGIGILYDRYGSLDHAEEAFSQVMRMQPDF 182
                 589****************************997 PP

  == domain 5  score: 17.1 bits;  conditional E-value: 4.6e-06
                 HHHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyye 25 
                 +++++lG +y ++ ky + le+++
  KHJ30074.1 187 EIYFRLGIIYKQQHKYHQSLECFR 210
                 58*********************7 PP

  == domain 6  score: 27.3 bits;  conditional E-value: 2.8e-09
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 ++++++G++y ++++++ A  +y+++L  +Pn+
  KHJ30074.1 224 DIWFQIGHVYEQQKELENAKMAYQRVLDRDPNH 256
                 68*****************************97 PP

  == domain 7  score: 0.7 bits;  conditional E-value: 0.7
                 HHHHHHHHHHHHHTT- CS
       TPR_1   1 akalynlGnayfklgk 16 
                 ak+l +lG +y+++ +
  KHJ30074.1 257 AKVLQQLGWLYHQQSQ 272
                 78999********975 PP

  == domain 8  score: 1.7 bits;  conditional E-value: 0.34
                 HHHHHHHHHHHHHSTT CS
       TPR_1  18 deAleyyekALelnPn 33 
                 ++Aley ek +  +P+
  KHJ30074.1 278 EQALEYLEKSVNSDPS 293
                 89*******9988887 PP

  == domain 9  score: 27.8 bits;  conditional E-value: 1.9e-09
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnPn 33 
                 a+++y lG +y+ ++ky +A e+y++A+  + +
  KHJ30074.1 295 AQTWYLLGRCYMAQQKYPKAYEAYQQAVYRDGK 327
                 789************************988765 PP

  == domain 10  score: 32.1 bits;  conditional E-value: 8.4e-11
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnP 32 
                  ++ +G++y++ ++y +Al++y++A++lnP
  KHJ30074.1 331 FWCSIGVLYYQINQYRDALDAYSRAIRLNP 360
                 5****************************9 PP

  == domain 11  score: 14.9 bits;  conditional E-value: 2.3e-05
                 HHHHHHHHHHHH.TT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfk.lgkydeAleyyekALelnPnn 34 
                 +++y lG +y + +++  +Al++y++A el+ nn
  KHJ30074.1 364 EVWYDLGTLYEScNNQISDALDAYQRAAELDQNN 397
                 78999999999834689***************98 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   8.1e-05     0.063       3      33 ..      47      77 ..      46      78 .. 0.94
   2 !    7.9   0.0    0.0048       3.8       8      34 .]      86     112 ..      80     112 .. 0.87
   3 !   15.6   0.2   1.6e-05     0.012       2      28 ..     114     140 ..     113     145 .. 0.93
   4 !   12.6   0.0   0.00015      0.11       1      33 [.     149     181 ..     149     182 .. 0.95
   5 !   15.2   0.2   2.3e-05     0.018       2      28 ..     187     213 ..     186     215 .. 0.90
   6 !   18.6   0.0   1.7e-06    0.0013       2      34 .]     224     256 ..     223     256 .. 0.96
   7 ?   -0.9   0.0       3.1   2.4e+03       1      14 [.     257     270 ..     257     273 .. 0.87
   8 ?    2.7   0.0      0.22   1.7e+02      18      34 .]     278     294 ..     275     294 .. 0.89
   9 !   24.7   1.9     2e-08   1.6e-05       1      31 [.     295     325 ..     295     328 .. 0.90
  10 !   23.9   0.0   3.5e-08   2.7e-05       3      32 ..     331     360 ..     329     361 .. 0.95
  11 !   16.4   0.2   8.9e-06    0.0069       2      34 .]     364     397 ..     363     397 .. 0.96

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 8.1e-05
       TPR_2  3 alynlGlayyklgdyeeAleafekAleldPn 33
                ++ ++G +++ l+ +eeA +a+e Al+ +P+
  KHJ30074.1 47 VWLQIGSLAEVLNCPEEAMNAYEHALRANPR 77
                68999************************96 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0048
       TPR_2   8 GlayyklgdyeeAleafekAleldPnn 34 
                   +++ + ++ +A+e+++  l+ +Pnn
  KHJ30074.1  86 SGILRSQEQFLKAVEYLQNILKVEPNN 112
                 557899*******************98 PP

  == domain 3  score: 15.6 bits;  conditional E-value: 1.6e-05
       TPR_2   2 ealynlGlayyklgdyeeAleafekAl 28 
                 e++  lG +y+ ++d+++A  a+++Al
  KHJ30074.1 114 EVWGSLGHCYLMMDDLQQAYTAYQQAL 140
                 78999*********************9 PP

  == domain 4  score: 12.6 bits;  conditional E-value: 0.00015
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPn 33 
                 ++++y +G +y + g ++ A+eaf ++ +  P+
  KHJ30074.1 149 PKLWYGIGILYDRYGSLDHAEEAFSQVMRMQPD 181
                 589**************************9998 PP

  == domain 5  score: 15.2 bits;  conditional E-value: 2.3e-05
       TPR_2   2 ealynlGlayyklgdyeeAleafekAl 28 
                 e++++lG +y ++ +y + le+f+  +
  KHJ30074.1 187 EIYFRLGIIYKQQHKYHQSLECFRYIV 213
                 79*********************9655 PP

  == domain 6  score: 18.6 bits;  conditional E-value: 1.7e-06
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                 ++++++G +y++++++e A+ a++++l  dPn+
  KHJ30074.1 224 DIWFQIGHVYEQQKELENAKMAYQRVLDRDPNH 256
                 58*****************************97 PP

  == domain 7  score: -0.9 bits;  conditional E-value: 3.1
       TPR_2   1 aealynlGlayykl 14 
                 a++l +lG++y ++
  KHJ30074.1 257 AKVLQQLGWLYHQQ 270
                 68999******997 PP

  == domain 8  score: 2.7 bits;  conditional E-value: 0.22
       TPR_2  18 eeAleafekAleldPnn 34 
                 e+Ale++ek++  dP +
  KHJ30074.1 278 EQALEYLEKSVNSDPSD 294
                 89*********999975 PP

  == domain 9  score: 24.7 bits;  conditional E-value: 2e-08
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleld 31 
                 a+ +y lG++y+++++y +A ea+++A+  d
  KHJ30074.1 295 AQTWYLLGRCYMAQQKYPKAYEAYQQAVYRD 325
                 678************************8766 PP

  == domain 10  score: 23.9 bits;  conditional E-value: 3.5e-08
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldP 32 
                  ++ +G +yy+ ++y +Al+a+ +A++l+P
  KHJ30074.1 331 FWCSIGVLYYQINQYRDALDAYSRAIRLNP 360
                 7999*************************9 PP

  == domain 11  score: 16.4 bits;  conditional E-value: 8.9e-06
       TPR_2   2 ealynlGlayyklgdy.eeAleafekAleldPnn 34 
                 e++y lG +y+  ++   +Al+a+++A eld nn
  KHJ30074.1 364 EVWYDLGTLYESCNNQiSDALDAYQRAAELDQNN 397
                 89*****************************997 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   0.00037      0.29       3      32 ..      47      76 ..      45      78 .. 0.94
   2 ?    4.3   0.0     0.073        57      10      34 .]      88     112 ..      80     112 .. 0.88
   3 !   10.6   0.2   0.00072      0.56       2      28 ..     114     140 ..     113     141 .. 0.95
   4 !   11.1   0.0   0.00047      0.36       2      33 ..     150     181 ..     149     182 .. 0.95
   5 !    9.4   0.0    0.0016       1.3       2      25 ..     187     210 ..     187     218 .. 0.91
   6 !   27.4   0.0   2.9e-09   2.3e-06       2      34 .]     224     256 ..     223     256 .. 0.96
   7 ?    6.8   0.1     0.012       9.1       1      33 [.     257     293 ..     257     294 .. 0.77
   8 !   18.2   0.9   2.5e-06     0.002       1      33 [.     295     327 ..     295     328 .. 0.94
   9 !   15.1   0.0   2.5e-05      0.02       3      32 ..     331     360 ..     329     362 .. 0.95
  10 !    8.2   0.2    0.0041       3.2       2      34 .]     364     397 ..     363     397 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00037
                HHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8  3 ayynlgsiylklgdyeeAkeyyekaleldp 32
                +++++gs+ + l+  eeA+ +ye+al+++p
  KHJ30074.1 47 VWLQIGSLAEVLNCPEEAMNAYEHALRANP 76
                799*************************99 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.073
                 HHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8  10 iylklgdyeeAkeyyekaleldpdn 34 
                 i+++++++ +A+ey++  l+ +p+n
  KHJ30074.1  88 ILRSQEQFLKAVEYLQNILKVEPNN 112
                 78899999***************96 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00072
                 CHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekal 28 
                 e++  lg++yl + d+++A  +y++al
  KHJ30074.1 114 EVWGSLGHCYLMMDDLQQAYTAYQQAL 140
                 79************************8 PP

  == domain 4  score: 11.1 bits;  conditional E-value: 0.00047
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 +++y +g +y+  g ++ A+e++ ++ +++pd
  KHJ30074.1 150 KLWYGIGILYDRYGSLDHAEEAFSQVMRMQPD 181
                 78****************************98 PP

  == domain 5  score: 9.4 bits;  conditional E-value: 0.0016
                 CHHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyye 25 
                 e+y++lg iy+++ +y+++ e+++
  KHJ30074.1 187 EIYFRLGIIYKQQHKYHQSLECFR 210
                 68********************98 PP

  == domain 6  score: 27.4 bits;  conditional E-value: 2.9e-09
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 ++++++g++y++++++e+Ak +y+++l+ dp++
  KHJ30074.1 224 DIWFQIGHVYEQQKELENAKMAYQRVLDRDPNH 256
                 68*****************************97 PP

  == domain 7  score: 6.8 bits;  conditional E-value: 0.012
                 CCHHHHHHHHHHHTT-H....HHHHHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdy....eeAkeyyekaleldpd 33 
                 a+++++lg++y+++ +     e+A ey+ek +  dp+
  KHJ30074.1 257 AKVLQQLGWLYHQQSQSfncqEQALEYLEKSVNSDPS 293
                 5677888888877777444449***********9997 PP

  == domain 8  score: 18.2 bits;  conditional E-value: 2.5e-06
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 a+ +y+lg++y+ +++y +A e+y++a++ d +
  KHJ30074.1 295 AQTWYLLGRCYMAQQKYPKAYEAYQQAVYRDGK 327
                 789*************************99876 PP

  == domain 9  score: 15.1 bits;  conditional E-value: 2.5e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldp 32 
                  ++ +g +y + ++y  A  +y +a++l+p
  KHJ30074.1 331 FWCSIGVLYYQINQYRDALDAYSRAIRLNP 360
                 69***************************9 PP

  == domain 10  score: 8.2 bits;  conditional E-value: 0.0041
                 CHHHHHHHHH.HHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   2 eayynlgsiy.lklgdyeeAkeyyekaleldpdn 34 
                 e++y lg +y +  +++  A  +y++a eld++n
  KHJ30074.1 364 EVWYDLGTLYeSCNNQISDALDAYQRAAELDQNN 397
                 89********666778999************986 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0       0.3   2.4e+02       1      32 [.      67      98 ..      67     100 .. 0.81
   2 !   15.8   0.0   1.7e-05     0.013       2      32 ..     102     132 ..     101     133 .. 0.93
   3 ?    3.4   0.1      0.16   1.2e+02       2      27 ..     136     163 ..     135     171 .. 0.81
   4 ?    1.8   0.0      0.51   3.9e+02      15      32 ..     188     205 ..     187     207 .. 0.86
   5 ?    0.3   0.0       1.5   1.2e+03      14      33 ..     224     243 ..     224     244 .. 0.90
   6 !   23.0   0.1   8.5e-08   6.6e-05       1      33 [.     245     277 ..     245     278 .. 0.91
   7 !   15.7   0.1   1.8e-05     0.014       2      32 ..     284     314 ..     283     316 .. 0.91
   8 !   15.3   0.1   2.5e-05     0.019       1      33 [.     317     349 ..     317     350 .. 0.96
   9 !   18.1   0.0   3.2e-06    0.0025       2      28 ..     352     378 ..     351     385 .. 0.82
  10 ?    2.9   0.0      0.22   1.8e+02       1      13 [.     386     398 ..     386     404 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.3
      TPR_17  1 lylkaleldPnnadaynnLAelllknGdlmtA 32
                +y+ al+ +P +  a+  +  +l+++ ++ +A
  KHJ30074.1 67 AYEHALRANPRSTQAMSAMSGILRSQEQFLKA 98
                59**********99998888777777777666 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 1.7e-05
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                 +++ l+ +Pnn +++  L+ ++l+  dl++A
  KHJ30074.1 102 LQNILKVEPNNGEVWGSLGHCYLMMDDLQQA 132
                 57889************************98 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.16
      TPR_17   2 ylkalel..dPnnadaynnLAelllknG 27 
                 y++al +  dP+ +++++  + l+ + G
  KHJ30074.1 136 YQQALYHlrDPKEPKLWYGIGILYDRYG 163
                 888888888***************8766 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.51
      TPR_17  15 aynnLAelllknGdlmtA 32 
                  y+ L+ ++++++++ + 
  KHJ30074.1 188 IYFRLGIIYKQQHKYHQS 205
                 79**********999876 PP

  == domain 5  score: 0.3 bits;  conditional E-value: 1.5
      TPR_17  14 daynnLAelllknGdlmtAr 33 
                 d +++ + +++++++l+ A+
  KHJ30074.1 224 DIWFQIGHVYEQQKELENAK 243
                 68************999987 PP

  == domain 6  score: 23.0 bits;  conditional E-value: 8.5e-08
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 +y+++l++dPn+a+++++L++l++++ ++  ++
  KHJ30074.1 245 AYQRVLDRDPNHAKVLQQLGWLYHQQSQSFNCQ 277
                 5***********************999987666 PP

  == domain 7  score: 15.7 bits;  conditional E-value: 1.8e-05
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                 ++k++  dP++a  +++L++++  + ++ +A
  KHJ30074.1 284 LEKSVNSDPSDAQTWYLLGRCYMAQQKYPKA 314
                 6999*******************99999887 PP

  == domain 8  score: 15.3 bits;  conditional E-value: 2.5e-05
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 +y++a+ +d +n+ +++  ++l+++++++++A+
  KHJ30074.1 317 AYQQAVYRDGKNPTFWCSIGVLYYQINQYRDAL 349
                 59****************************996 PP

  == domain 9  score: 18.1 bits;  conditional E-value: 3.2e-06
      TPR_17   2 ylkaleldPnnadaynnLAelllknGd 28 
                 y +a++l+P  +++++ L++l+++ ++
  KHJ30074.1 352 YSRAIRLNPFISEVWYDLGTLYESCNN 378
                 99********************85543 PP

  == domain 10  score: 2.9 bits;  conditional E-value: 0.22
      TPR_17   1 lylkaleldPnna 13 
                 +y++a+eld nn+
  KHJ30074.1 386 AYQRAAELDQNNP 398
                 5***********7 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.1     0.029        23      13      36 ..      61      81 ..      49      87 .. 0.75
   2 !   11.2   0.0   0.00058      0.45       6      61 ..      88     140 ..      83     149 .. 0.87
   3 ?    6.8   0.3     0.013        10      12      60 ..     128     175 ..     123     183 .. 0.83
   4 !    8.1   0.0    0.0055       4.3      11      47 ..     163     199 ..     153     219 .. 0.80
   5 !   12.3   0.1   0.00027      0.21       3      48 ..     229     271 ..     227     272 .. 0.92
   6 !   22.2   0.1   2.1e-07   0.00016      15      63 ..     279     324 ..     278     329 .. 0.83
   7 !   28.1   0.1   3.1e-09   2.4e-06       4      68 .]     336     398 ..     333     398 .. 0.93

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.029
      TPR_16 13 yddAaaaleaalkrdpssPdaaeA 36
                +++A +a+e al+++   P+  +A
  KHJ30074.1 61 PEEAMNAYEHALRAN---PRSTQA 81
                89*************...666555 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00058
      TPR_16   6 aalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraal 61 
                 +++ + ++ +A+++l+  lk     P + e +  lg ++l   +l+ A  +y+ al
  KHJ30074.1  88 ILRSQEQFLKAVEYLQNILKVE---PNNGEVWGSLGHCYLMMDDLQQAYTAYQQAL 140
                 6788999***************...***********************97777766 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.013
      TPR_16  12 dyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraa 60 
                 d ++A  a+++al    ++P  +  +++ g ++ r g l+ A++++   
  KHJ30074.1 128 DLQQAYTAYQQALYHL-RDPKEPKLWYGIGILYDRYGSLDHAEEAFSQV 175
                 6788999997777444.6899**********************998765 PP

  == domain 4  score: 8.1 bits;  conditional E-value: 0.0055
      TPR_16  11 gdyddAaaaleaalkrdpssPdaaeAllllgdaalrq 47 
                 g  d A++a+ ++ +++p+   a e ++ lg ++ +q
  KHJ30074.1 163 GSLDHAEEAFSQVMRMQPDFEKANEIYFRLGIIYKQQ 199
                 667889***********99999*********999887 PP

  == domain 5  score: 12.3 bits;  conditional E-value: 0.00027
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqg 48 
                  ++ + ++++ + A  a++++l+rd   P +a  l  lg+++ +q+
  KHJ30074.1 229 IGHVYEQQKELENAKMAYQRVLDRD---PNHAKVLQQLGWLYHQQS 271
                 699**********************...*****9999999999886 PP

  == domain 6  score: 22.2 bits;  conditional E-value: 2.1e-07
      TPR_16  15 dAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalra 63 
                 +A+++le  + +d   P +a+ ++llg+++ +q+ +++A ++y+ a+  
  KHJ30074.1 279 QALEYLEKSVNSD---PSDAQTWYLLGRCYMAQQKYPKAYEAYQQAVYR 324
                 6777777777777...************************999988744 PP

  == domain 7  score: 28.1 bits;  conditional E-value: 3.1e-09
      TPR_16   4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaal.rqgrlaeAaalyraalraapdap 68 
                 + ++++ ++y+dA+ a+ +a++++   P+  e ++ lg ++   ++   +A+++y++a++ + ++p
  KHJ30074.1 336 GVLYYQINQYRDALDAYSRAIRLN---PFISEVWYDLGTLYEsCNNQISDALDAYQRAAELDQNNP 398
                 6689********************...***************778*************99998876 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1     0.055        43      11      27 ..      62      78 ..      62      84 .. 0.89
   2 ?    5.6   0.0     0.017        13       3      41 ..      88     126 ..      88     127 .. 0.93
   3 ?    4.4   1.1     0.039        30       9      38 ..     128     159 ..     126     163 .. 0.84
   4 ?    2.7   0.0      0.13     1e+02      29      41 ..     187     199 ..     162     199 .. 0.80
   5 !   15.3   0.1   1.5e-05     0.012       1      41 [.     230     270 ..     225     271 .. 0.98
   6 !   11.4   0.1   0.00024      0.19      11      41 ..     278     308 ..     276     309 .. 0.94
   7 !   27.0   0.5   3.3e-09   2.5e-06       1      40 [.     302     341 ..     302     342 .. 0.96
   8 !   23.2   0.5   5.3e-08   4.1e-05       4      39 ..     339     374 ..     338     375 .. 0.95
   9 !   14.6   0.7   2.5e-05     0.019       8      29 ..     378     399 ..     377     401 .. 0.92

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.055
      TPR_11 11 eeAieaYkkAlkldPdn 27
                eeA++aY+ Al+ +P +
  KHJ30074.1 62 EEAMNAYEHALRANPRS 78
                8***********99975 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.017
      TPR_11   3 ayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykq 41 
                 ++++q ++ +A+e +++ lk  P+n e++  LG+ y+++
  KHJ30074.1  88 ILRSQEQFLKAVEYLQNILKVEPNNGEVWGSLGHCYLMM 126
                 6899*****************************999865 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.039
      TPR_11   9 kyeeAieaYkkAlkl..dPdnaeayynLGlay 38 
                 ++ +A +aY++Al    dP+ + ++y++G +y
  KHJ30074.1 128 DLQQAYTAYQQALYHlrDPKEPKLWYGIGILY 159
                 57899999***997445999999999999988 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.13
      TPR_11  29 eayynLGlayykq 41 
                 e+y+ LG +y +q
  KHJ30074.1 187 EIYFRLGIIYKQQ 199
                 89********987 PP

  == domain 5  score: 15.3 bits;  conditional E-value: 1.5e-05
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykq 41 
                 G++y +q ++e+A  aY++ l+ dP+ a ++  LG +y++q
  KHJ30074.1 230 GHVYEQQKELENAKMAYQRVLDRDPNHAKVLQQLGWLYHQQ 270
                 89999**********************************98 PP

  == domain 6  score: 11.4 bits;  conditional E-value: 0.00024
      TPR_11  11 eeAieaYkkAlkldPdnaeayynLGlayykq 41 
                 e+A+e ++k ++ dP++a  +y LG  y++q
  KHJ30074.1 278 EQALEYLEKSVNSDPSDAQTWYLLGRCYMAQ 308
                 89***********************999887 PP

  == domain 7  score: 27.0 bits;  conditional E-value: 3.3e-09
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayyk 40 
                 G+ y++q+ky++A eaY++A+  d +n+++++ +G++yy+
  KHJ30074.1 302 GRCYMAQQKYPKAYEAYQQAVYRDGKNPTFWCSIGVLYYQ 341
                 677************************************8 PP

  == domain 8  score: 23.2 bits;  conditional E-value: 5.3e-08
      TPR_11   4 yyeqGkyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 yy+ ++y +A+ aY++A++l+P   e++y LG +y 
  KHJ30074.1 339 YYQINQYRDALDAYSRAIRLNPFISEVWYDLGTLYE 374
                 9*******************************9885 PP

  == domain 9  score: 14.6 bits;  conditional E-value: 2.5e-05
      TPR_11   8 GkyeeAieaYkkAlkldPdnae 29 
                 +++ +A+ aY++A +ld++n+ 
  KHJ30074.1 378 NQISDALDAYQRAAELDQNNPH 399
                 7999****************96 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0     2e-05     0.016       8      63 ..      62     117 ..      59     122 .. 0.91
   2 !   23.6   0.2     7e-08   5.5e-05       2      50 ..      90     138 ..      89     140 .. 0.91
   3 !   22.1   0.2     2e-07   0.00016       2      57 ..     124     181 ..     123     192 .. 0.92
   4 !   10.5   0.5   0.00086      0.67       3      40 ..     235     272 ..     233     273 .. 0.93
   5 !   23.5   0.1   7.4e-08   5.8e-05       9      59 ..     279     329 ..     278     332 .. 0.92
   6 !   18.0   1.4   3.8e-06     0.003       6      62 ..     344     401 ..     340     407 .. 0.94

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 2e-05
      TPR_19   8 aeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddaryas 63 
                 +eA++++e al ++p +  a  ++  +l ++ q+ +A + L+ +++ +p++ ++++
  KHJ30074.1  62 EEAMNAYEHALRANPRSTQAMSAMSGILRSQEQFLKAVEYLQNILKVEPNNGEVWG 117
                 79***********************************************9977765 PP

  == domain 2  score: 23.6 bits;  conditional E-value: 7e-08
      TPR_19   2 laegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLda 50 
                   ++++  A+++l+++l+ +p+n+e++  L  ++l + +l++A  + ++
  KHJ30074.1  90 RSQEQFLKAVEYLQNILKVEPNNGEVWGSLGHCYLMMDDLQQAYTAYQQ 138
                 57999**************************************877665 PP

  == domain 3  score: 22.1 bits;  conditional E-value: 2e-07
      TPR_19   2 laegdyaeAlalleqal..qedpknaearllLAeallalgqldeAealLdalpeedpd 57 
                 l++ d+++A  +++qal    dpk + ++++  +++   g ld Ae++ +++++++pd
  KHJ30074.1 124 LMMDDLQQAYTAYQQALyhLRDPKEPKLWYGIGILYDRYGSLDHAEEAFSQVMRMQPD 181
                 7899************85566************************************9 PP

  == domain 4  score: 10.5 bits;  conditional E-value: 0.00086
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAeallalgq 40 
                 +++ +++A  +++++l+ dp++a ++ +L  ++ ++ q
  KHJ30074.1 235 QQKELENAKMAYQRVLDRDPNHAKVLQQLGWLYHQQSQ 272
                 68899****************************99876 PP

  == domain 5  score: 23.5 bits;  conditional E-value: 7.4e-08
      TPR_19   9 eAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpdda 59 
                 +Al++le+    dp +a  ++lL ++++a+  + +A ++ +++   d +++
  KHJ30074.1 279 QALEYLEKSVNSDPSDAQTWYLLGRCYMAQQKYPKAYEAYQQAVYRDGKNP 329
                 8**************************************999998888766 PP

  == domain 6  score: 18.0 bits;  conditional E-value: 3.8e-06
      TPR_19   6 dyaeAlalleqalqedpknaearllLAeallal.gqldeAealLdalpeedpddarya 62 
                 +y +Al+++++a+  +p  +e++++L  ++ +  +q+ +A ++ +++ e d++++ ++
  KHJ30074.1 344 QYRDALDAYSRAIRLNPFISEVWYDLGTLYESCnNQISDALDAYQRAAELDQNNPHIK 401
                 9*******************************99*******************99887 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.1     0.027        21      15      37 ..      59      81 ..      46      89 .. 0.77
   2 !    9.8   0.0    0.0019       1.5       6      42 ..      84     120 ..      80     122 .. 0.88
   3 ?   -0.3   0.0       3.4   2.7e+03       8      28 ..     120     140 ..     118     148 .. 0.79
   4 !   10.6   0.0    0.0011      0.83       1      43 [.     149     191 ..     149     195 .. 0.90
   5 ?   -1.1   0.0       6.4     5e+03       3      25 ..     188     210 ..     186     214 .. 0.89
   6 !   19.0   0.0   2.2e-06    0.0017       3      42 ..     225     264 ..     223     266 .. 0.94
   7 !    9.6   0.0    0.0023       1.8       6      44 .]     262     304 ..     260     304 .. 0.84
   8 !   10.3   0.1    0.0014       1.1       2      38 ..     296     332 ..     295     338 .. 0.89
   9 !   11.2   0.1   0.00072      0.56      10      43 ..     338     371 ..     331     372 .. 0.89
  10 !   11.8   0.1   0.00044      0.35       2      39 ..     364     404 ..     363     408 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.027
      TPR_14 15 GdpdeAiallrralalaPddaea 37
                  p+eA+++++ al+++P + +a
  KHJ30074.1 59 NCPEEAMNAYEHALRANPRSTQA 81
                5589**************98776 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.0019
      TPR_14   6 alaeallalGdpdeAiallrralalaPddaeawllla 42 
                 a+  +l+ ++++ +A+++l+ +l+  P++ e+w  l+
  KHJ30074.1  84 AMSGILRSQEQFLKAVEYLQNILKVEPNNGEVWGSLG 120
                 56678999*************************8765 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 3.4
      TPR_14   8 aeallalGdpdeAiallrral 28 
                 ++ +l  +d+++A +++++al
  KHJ30074.1 120 GHCYLMMDDLQQAYTAYQQAL 140
                 666777889999999999986 PP

  == domain 4  score: 10.6 bits;  conditional E-value: 0.0011
      TPR_14   1 peallalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 p++++ ++ ++ + G +d A++++ ++ + +Pd++ a+  + +
  KHJ30074.1 149 PKLWYGIGILYDRYGSLDHAEEAFSQVMRMQPDFEKANEIYFR 191
                 689******************************9988766555 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 6.4
      TPR_14   3 allalaeallalGdpdeAiallr 25 
                  + +l+ ++ ++ ++ ++++++r
  KHJ30074.1 188 IYFRLGIIYKQQHKYHQSLECFR 210
                 6789***********99999987 PP

  == domain 6  score: 19.0 bits;  conditional E-value: 2.2e-06
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawllla 42 
                  + +++++++++ +++ A  +++r+l+++P++a ++ +l+
  KHJ30074.1 225 IWFQIGHVYEQQKELENAKMAYQRVLDRDPNHAKVLQQLG 264
                 699********************************99997 PP

  == domain 7  score: 9.6 bits;  conditional E-value: 0.0023
      TPR_14   6 alaeallalGd....pdeAiallrralalaPddaeawlllaql 44 
                 +l++++ ++ +     ++A+++l++ +  +P+da++w+ll+++
  KHJ30074.1 262 QLGWLYHQQSQsfncQEQALEYLEKSVNSDPSDAQTWYLLGRC 304
                 677777777766777799**********************996 PP

  == domain 8  score: 10.3 bits;  conditional E-value: 0.0014
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeaw 38 
                 + +++l++ ++a++++ +A +++++a+ ++ +++++w
  KHJ30074.1 296 QTWYLLGRCYMAQQKYPKAYEAYQQAVYRDGKNPTFW 332
                 68************************87788888777 PP

  == domain 9  score: 11.2 bits;  conditional E-value: 0.00072
      TPR_14  10 allalGdpdeAiallrralalaPddaeawlllaq 43 
                 ++++  ++++A++++ ra++l+P   e+w+ l+ 
  KHJ30074.1 338 LYYQINQYRDALDAYSRAIRLNPFISEVWYDLGT 371
                 688889***********************99985 PP

  == domain 10  score: 11.8 bits;  conditional E-value: 0.00044
      TPR_14   2 eallalaealla.lGdpdeAiallrralalaPdda..eawl 39 
                 e++++l+ +++  + +  +A+++++ra +l+ +++   a+l
  KHJ30074.1 364 EVWYDLGTLYEScNNQISDALDAYQRAAELDQNNPhiKARL 404
                 78********9735689**********99998887224555 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1       1.5   1.2e+03      61      74 ..      61      74 ..      46      77 .. 0.64
   2 !   13.9   1.4   6.4e-05      0.05       6      72 ..      82     140 ..      77     144 .. 0.91
   3 !   19.4   0.4   1.2e-06   0.00097       5      75 ..     115     179 ..     112     181 .. 0.89
   4 ?    5.8   0.0     0.022        17       5      26 ..     188     209 ..     184     214 .. 0.64
   5 !   20.5   0.5   5.6e-07   0.00044       5      72 ..     225     288 ..     221     293 .. 0.84
   6 !   26.4   1.0     8e-09   6.3e-06       3      74 ..     295     358 ..     293     360 .. 0.89
   7 !    8.2   0.2    0.0037       2.9      45      76 ..     363     395 ..     358     396 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 1.5
      TPR_12 61 yeeAlelleealai 74
                +eeA +++e+al++
  KHJ30074.1 61 PEEAMNAYEHALRA 74
                56777777777765 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 6.4e-05
      TPR_12   6 lnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeal 72 
                 ++ +  +lr ++++ +A e+l+  l +      p++    ++   Lg +y++++++++A  ++++al
  KHJ30074.1  82 MSAMSGILRSQEQFLKAVEYLQNILKVE-----PNN---GEVWGSLGHCYLMMDDLQQAYTAYQQAL 140
                 55788999****************9999.....887...889***********************98 PP

  == domain 3  score: 19.4 bits;  conditional E-value: 1.2e-06
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                 ++  l+++++ + ++++A + +++al       +p    +    +++g+ly++ g ++ A+e++ +++++ 
  KHJ30074.1 115 VWGSLGHCYLMMDDLQQAYTAYQQALYHL---RDP---KEPKLWYGIGILYDRYGSLDHAEEAFSQVMRMQ 179
                 5777*********************9999...335...46668*************************996 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.022
      TPR_12   5 alnnlaavlrrlgrydeAlell 26 
                 ++ +l+ ++ ++ +y+++le++
  KHJ30074.1 188 IYFRLGIIYKQQHKYHQSLECF 209
                 4445666666666666666665 PP

  == domain 5  score: 20.5 bits;  conditional E-value: 5.6e-07
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgr....yeeAlelleeal 72 
                 ++ ++++v+ ++++++ A   ++++l++      p+h   a +l+ Lg+ly+++ +    +e+Ale+le+++
  KHJ30074.1 225 IWFQIGHVYEQQKELENAKMAYQRVLDRD-----PNH---AKVLQQLGWLYHQQSQsfncQEQALEYLEKSV 288
                 56689************************.....999...99*********999774444477777777776 PP

  == domain 6  score: 26.4 bits;  conditional E-value: 8e-09
      TPR_12   3 atalnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74 
                 a++++ l+ +++++++y +A e +++a+ +      +++    t  + +g ly++ ++y++Al+++ +a+++
  KHJ30074.1 295 AQTWYLLGRCYMAQQKYPKAYEAYQQAVYRD-----GKN---PTFWCSIGVLYYQINQYRDALDAYSRAIRL 358
                 78899**********************5555.....554...6699***********************987 PP

  == domain 7  score: 8.2 bits;  conditional E-value: 0.0037
      TPR_12  45 attlrnLgrly.ralgryeeAlelleealaiae 76 
                 +++ ++Lg+ly +  ++  +Al+++++a ++++
  KHJ30074.1 363 SEVWYDLGTLYeSCNNQISDALDAYQRAAELDQ 395
                 677899****966***************99976 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0    0.0021       1.6      32      69 ..      48      85 ..      46      88 .. 0.89
   2 !   15.7   0.0   1.6e-05     0.013       4      59 ..      88     143 ..      85     147 .. 0.92
   3 !    7.9   0.1    0.0044       3.5      24      67 ..     143     187 ..     135     192 .. 0.86
   4 ?    3.1   0.0      0.13     1e+02      35      61 ..     192     218 ..     184     226 .. 0.80
   5 !   13.1   0.2   0.00011     0.083       3      64 ..     231     296 ..     229     301 .. 0.90
   6 !   18.6   0.1   1.9e-06    0.0015       3      60 ..     303     360 ..     301     364 .. 0.95
   7 !   11.8   0.9   0.00026       0.2       4      67 ..     338     402 ..     335     408 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0021
       TPR_9 32 rrdRGlllaqlGclsaAladLeaylalapdapdaeair 69
                ++  G l + l+c+++A+++ e++l+ +p   +a  ++
  KHJ30074.1 48 WLQIGSLAEVLNCPEEAMNAYEHALRANPRSTQAMSAM 85
                778899***********************998886665 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 1.6e-05
       TPR_9   4 iaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylala 59 
                 i+ ++e++ +a ++++ +l + P+  e +   G ++  +++l++A  + +++l + 
  KHJ30074.1  88 ILRSQEQFLKAVEYLQNILKVEPNNGEVWGSLGHCYLMMDDLQQAYTAYQQALYHL 143
                 77899*********************************************999665 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.0044
       TPR_9  24 l.aPddpeerrdRGlllaqlGclsaAladLeaylalapdapdaea 67 
                 l +P++p +++  G+l+ + G l  A +++ + ++++pd + a  
  KHJ30074.1 143 LrDPKEPKLWYGIGILYDRYGSLDHAEEAFSQVMRMQPDFEKANE 187
                 349***********************************9877765 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.13
       TPR_9  35 RGlllaqlGclsaAladLeaylalapd 61 
                  G+++ q+  +++ l+++ + +al p+
  KHJ30074.1 192 LGIIYKQQHKYHQSLECFRYIVALPPA 218
                 689999999999999999998888775 PP

  == domain 5  score: 13.1 bits;  conditional E-value: 0.00011
       TPR_9   3 aiaireedweralavverllllaPddpeerrdRGlllaql....GclsaAladLeaylalapdapd 64 
                 +++ ++++ e a  +++r+l  +P+++  +   G l++q+    +c ++Al+ Le  +  +p++++
  KHJ30074.1 231 HVYEQQKELENAKMAYQRVLDRDPNHAKVLQQLGWLYHQQsqsfNCQEQALEYLEKSVNSDPSDAQ 296
                 7899*********************************9985666899**************97765 PP

  == domain 6  score: 18.6 bits;  conditional E-value: 1.9e-06
       TPR_9   3 aiaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalap 60 
                 ++++ ++++++a ++++  ++ + + p  +   G+l++q ++++ Al++  ++++l+p
  KHJ30074.1 303 RCYMAQQKYPKAYEAYQQAVYRDGKNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNP 360
                 689***************************************************9988 PP

  == domain 7  score: 11.8 bits;  conditional E-value: 0.00026
       TPR_9   4 iaireedweralavverllllaPddpeerrdRGlllaqlG.clsaAladLeaylalapdapdaea 67 
                 ++ + +++  al ++ r + l+P   e ++d G l++  + ++s Al++ +++++l+ ++p + a
  KHJ30074.1 338 LYYQINQYRDALDAYSRAIRLNPFISEVWYDLGTLYESCNnQISDALDAYQRAAELDQNNPHIKA 402
                 577889999****************************985279***********99998887665 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       4.5   3.5e+03      16      33 .]      61      78 ..      48      78 .. 0.85
   2 ?    3.8   0.0      0.14   1.1e+02      13      32 ..      92     111 ..      80     112 .. 0.80
   3 !    7.8   0.4    0.0072       5.6       6      27 ..     119     140 ..     118     141 .. 0.92
   4 ?   -0.5   0.0       3.2   2.5e+03       4      32 ..     153     181 ..     151     186 .. 0.85
   5 ?    1.8   0.0      0.62   4.8e+02       3      24 ..     189     210 ..     187     214 .. 0.85
   6 !   19.0   0.0     2e-06    0.0016       3      33 .]     226     256 ..     224     256 .. 0.94
   7 ?    2.2   0.0      0.45   3.5e+02       5      31 ..     262     292 ..     258     294 .. 0.71
   8 !   15.1   1.2   3.5e-05     0.028       3      28 ..     298     323 ..     296     327 .. 0.90
   9 !   10.1   0.1    0.0014       1.1       6      31 ..     335     360 ..     334     360 .. 0.92
  10 !    8.3   0.1    0.0051         4       1      27 [.     364     391 ..     364     394 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 4.5
                HHHHHHHHHHHHHH-TT- CS
       TPR_6 16 tdkAlealerlikeYPdS 33
                +++A+ a+e  ++  P S
  KHJ30074.1 61 PEEAMNAYEHALRANPRS 78
                589******999999987 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.14
                 HHHHHHHHHHHHHHHHH-TT CS
       TPR_6  13 lgdtdkAlealerlikeYPd 32 
                 + +  kA+e+l++++k  P+
  KHJ30074.1  92 QEQFLKAVEYLQNILKVEPN 111
                 45888**********99998 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0072
                 HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealerli 27 
                 l+ +y++++d ++A +a+++ +
  KHJ30074.1 119 LGHCYLMMDDLQQAYTAYQQAL 140
                 799****************975 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 3.2
                 HHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   4 yklalsyrklgdtdkAlealerlikeYPd 32 
                 y ++ +y + g  d A ea+ ++ +  Pd
  KHJ30074.1 153 YGIGILYDRYGSLDHAEEAFSQVMRMQPD 181
                 89999999977999999999999877665 PP

  == domain 5  score: 1.8 bits;  conditional E-value: 0.62
                 HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAleale 24 
                 +++l+  y+++ ++ ++le ++
  KHJ30074.1 189 YFRLGIIYKQQHKYHQSLECFR 210
                 89*******9559999999997 PP

  == domain 6  score: 19.0 bits;  conditional E-value: 2e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH-TT- CS
       TPR_6   3 lyklalsyrklgdtdkAlealerlikeYPdS 33 
                  ++++  y+++++ ++A+ a++r++++ P++
  KHJ30074.1 226 WFQIGHVYEQQKELENAKMAYQRVLDRDPNH 256
                 699**************************96 PP

  == domain 7  score: 2.2 bits;  conditional E-value: 0.45
                 HHHHHHHHH....HHHHHHHHHHHHHHHH-T CS
       TPR_6   5 klalsyrkl....gdtdkAlealerlikeYP 31 
                 +l+++y ++    +  ++Ale+le+ +++ P
  KHJ30074.1 262 QLGWLYHQQsqsfNCQEQALEYLEKSVNSDP 292
                 688888877444443459999**99888877 PP

  == domain 8  score: 15.1 bits;  conditional E-value: 3.5e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAlealerlik 28 
                  y+l+++y +++++ kA ea+++ + 
  KHJ30074.1 298 WYLLGRCYMAQQKYPKAYEAYQQAVY 323
                 69********88***********985 PP

  == domain 9  score: 10.1 bits;  conditional E-value: 0.0014
                 HHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   6 lalsyrklgdtdkAlealerlikeYP 31 
                 ++ +y++ +++++Al+a+ r i+  P
  KHJ30074.1 335 IGVLYYQINQYRDALDAYSRAIRLNP 360
                 799****88*************9877 PP

  == domain 10  score: 8.3 bits;  conditional E-value: 0.0051
                 HHHHHHHHHHHH.HHHHHHHHHHHHHHH CS
       TPR_6   1 dAlyklalsyrk.lgdtdkAlealerli 27 
                 ++ y l+ +y++  ++ ++Al+a++r  
  KHJ30074.1 364 EVWYDLGTLYEScNNQISDALDAYQRAA 391
                 57899********************986 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       3.9     3e+03      16      30 ..      62      74 ..      48      78 .. 0.78
   2 ?    0.0   0.0       1.4   1.1e+03       4      29 ..      84     107 ..      81     114 .. 0.74
   3 !    6.9   0.0    0.0091       7.1       2      32 ..     116     146 ..     115     150 .. 0.81
   4 ?    5.4   0.0     0.027        21       2      24 ..     189     211 ..     188     223 .. 0.85
   5 ?    6.3   0.0     0.014        11       2      35 ..     226     257 ..     225     258 .. 0.93
   6 ?    3.8   0.1     0.092        72      15      35 ..     277     295 ..     259     296 .. 0.69
   7 !   14.7   0.1   2.9e-05     0.022       1      32 [.     297     326 ..     297     330 .. 0.88
   8 !    9.6   0.0    0.0012      0.95       2      34 ..     332     362 ..     332     364 .. 0.90
   9 ?    4.1   0.1     0.073        57       2      33 ..     366     396 ..     365     401 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 3.9
       TPR_7 16 eeAielyeqsLaltk 30
                eeA   ye   al+ 
  KHJ30074.1 62 EEAMNAYEH--ALRA 74
                89999****..5554 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 1.4
       TPR_7   4 nLarlysrlGdyeeAielyeqsLalt 29 
                 ++  + +++ ++ +A+e+++  L   
  KHJ30074.1  84 AMSGILRSQEQFLKAVEYLQNIL--K 107
                 5666889999999******9844..3 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0091
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsL.altkdp 32 
                 +  L+++y  + d ++A + y+q+L  l +dp
  KHJ30074.1 116 WGSLGHCYLMMDDLQQAYTAYQQALyHL-RDP 146
                 6789*******************99444.444 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.027
       TPR_7   2 LlnLarlysrlGdyeeAielyeq 24 
                 +++L+ +y ++ +y + +e+++ 
  KHJ30074.1 189 YFRLGIIYKQQHKYHQSLECFRY 211
                 789******************86 PP

  == domain 5  score: 6.3 bits;  conditional E-value: 0.014
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkdpeda 35 
                 +++++++y+++ + e+A   y++  +l++dp++a
  KHJ30074.1 226 WFQIGHVYEQQKELENAKMAYQR--VLDRDPNHA 257
                 5789*******************..******997 PP

  == domain 6  score: 3.8 bits;  conditional E-value: 0.092
       TPR_7  15 yeeAielyeqsLaltkdpeda 35 
                  e+A+e++e+   + +dp+da
  KHJ30074.1 277 QEQALEYLEK--SVNSDPSDA 295
                 599*******..999999885 PP

  == domain 7  score: 14.7 bits;  conditional E-value: 2.9e-05
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdp 32 
                 +++ L+r+y ++++y +A e y+q  a+ +d 
  KHJ30074.1 297 TWYLLGRCYMAQQKYPKAYEAYQQ--AVYRDG 326
                 6899********************..887775 PP

  == domain 8  score: 9.6 bits;  conditional E-value: 0.0012
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkdped 34 
                 ++ +++ly + ++y++A++ y +  a++  p++
  KHJ30074.1 332 WCSIGVLYYQINQYRDALDAYSR--AIRLNPFI 362
                 5899*******************..99998876 PP

  == domain 9  score: 4.1 bits;  conditional E-value: 0.073
       TPR_7   2 LlnLarlysr.lGdyeeAielyeqsLaltkdpe 33 
                 ++ L+ ly++  ++ ++A++ y++  a + d++
  KHJ30074.1 366 WYDLGTLYEScNNQISDALDAYQR--AAELDQN 396
                 567999999999999*********..5555554 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.6   2.1e-06    0.0016     141     241 ..      40     140 ..      31     153 .. 0.86
   2 !   21.1   4.4   1.9e-07   0.00015      17     237 ..      88     318 ..      86     320 .. 0.75
   3 !   11.3   1.8   0.00018      0.14      71     184 ..     285     402 ..     278     409 .. 0.43

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 2.1e-06
      TPR_15 141 aaeqsaafllaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgrraeLrellkawkaraesdasLwgplaaAlllLgrpkkALeylrk 239
                  ++ +++++l  ++l++  + +++A+++y+ Al+++p s+++ +a+  +l   ++  ++ e+l++  + + ++ + wg l+  +l++ + ++A   +++
  KHJ30074.1  40 LMAANETVWLQIGSLAEVLNCPEEAMNAYEHALRANPRSTQAMSAMSGILRSQEQFLKAVEYLQNILKVEPNNGEVWGSLGHCYLMMDDLQQAYTAYQQ 138
                 4567899**************************************9888876666666778899999899***********************988877 PP

      TPR_15 240 qa 241
                  +
  KHJ30074.1 139 AL 140
                 54 PP

  == domain 2  score: 21.1 bits;  conditional E-value: 1.9e-07
      TPR_15  17 llykqgdvkkAlevLkeaaqkaapskdteyWrtladLAwalqqedearkAyrqLla.sgkaraedyerliellydaepkeaarlaekgwrrfrspr.lL 113
                 +l  q+++ kA e L +++ k+  +++ e+W +l+     + + ++a +Ay+q l+  ++ ++  +   i +lyd+    +++ ae+++ +  +++  +
  KHJ30074.1  88 ILRSQEQFLKAVEYL-QNILKV-EPNNGEVWGSLGHCYLMMDDLQQAYTAYQQALYhLRDPKEPKLWYGIGILYDR--YGSLDHAEEAFSQVMRMQpDF 182
                 678899999999999.778888.49999999999999999999999999999855505555555666666665554..468888888888865544223 PP

      TPR_15 114 ssale.......llerakdydriaellksleeeeaae.qsaafllaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgrrae.Lrell 203
                 ++a e       +++++++y++  e ++++ +++ a   ++ +++  + +y+q+ + ++A  +y+++l+++p+ +++ ++l Wl+   ++  +   ++l
  KHJ30074.1 183 EKANEiyfrlgiIYKQQHKYHQSLECFRYIVALPPAPlTEEDIWFQIGHVYEQQKELENAKMAYQRVLDRDPNHAKVLQQLGWLYHQQSQSFNcQEQAL 281
                 333331122222578999***********999887766999********************************************98887655333455 PP

      TPR_15 204 kawkara...esdasLwgplaaAlllLgrpkkALeyl 237
                 + +++      sda+ w  l+  +++ +++ kA e +
  KHJ30074.1 282 EYLEKSVnsdPSDAQTWYLLGRCYMAQQKYPKAYEAY 318
                 4444444555888888988888888888888887666 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 0.00018
      TPR_15  71 lasgkaraedyerliel.l....ydaepkeaarlaekgwrrfrsprlLssalellerakdydriaellksleeeeaaeqsaafllaraely.rqegqtd 163
                  +s +++++d+++ ++l +    +++ pk+  ++ ++ +r  ++p ++ s   l+++ ++y+   +   ++ +++ +   + +++ ++ ly + ++q  
  KHJ30074.1 285 EKSVNSDPSDAQTWYLLgRcymaQQKYPKAYEAYQQAVYRDGKNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPFI--SEVWYDLGTLYeSCNNQIS 381
                 444444444554444443221222333333344444445555555555555555555555544444433333333332..2233333333303344445 PP

      TPR_15 164 aAlrdyreAlalapdsselra 184
                 +Al +y++A +l+ ++  ++a
  KHJ30074.1 382 DALDAYQRAAELDQNNPHIKA 402
                 555555555555555555555 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   8.9e-06     0.007       7      81 ..      63     138 ..      61     139 .. 0.95
   2 !   24.3   4.2   3.5e-08   2.7e-05       1      80 [.     235     319 ..     235     321 .. 0.93
   3 !   28.8   2.7   1.4e-09   1.1e-06       6      81 ..     278     354 ..     275     355 .. 0.96
   4 ?    3.7   0.1     0.096        74      30      79 ..     336     387 ..     322     390 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 8.9e-06
                 HHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3   7 nAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 +A+  +e +l a+++s ++  + +  l +++q+ +A e+l++  k ++++ +++  +++c+l ++ +++A++a++ 
  KHJ30074.1  63 EAMNAYEHALRANPRSTQAMSAMSGILRSQEQFLKAVEYLQNIlKVEPNNGEVWGSLGHCYLMMDDLQQAYTAYQQ 138
                 6888999999999***********************************************************9875 PP

  == domain 2  score: 24.3 bits;  conditional E-value: 3.5e-08
                 HTT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-....HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3   1 dqnnyknAiflaerllaaetespedayllAlclylngq....ykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                 +q+ ++nA + + r+l +++++++ +  l+  + +++q     ++A+e+l+k+ ++++++ + +yl+++c+ +++ky +A+ a++
  KHJ30074.1 235 QQKELENAKMAYQRVLDRDPNHAKVLQQLGWLYHQQSQsfncQEQALEYLEKSvNSDPSDAQTWYLLGRCYMAQQKYPKAYEAYQ 319
                 68899***********999999999999**********988889*************************************9987 PP

  == domain 3  score: 28.8 bits;  conditional E-value: 1.4e-09
                 HHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3   6 knAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 + A+ ++e+ +++++ +++  yll+ c+  +++y +Aye +++a   ++k++  +  ++  ++++++y +A++a+++
  KHJ30074.1 278 EQALEYLEKSVNSDPSDAQTWYLLGRCYMAQQKYPKAYEAYQQAvYRDGKNPTFWCSIGVLYYQINQYRDALDAYSR 354
                 57999********************************************************************9875 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.096
                 HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHT.T-HHHHHHHH CS
      ANAPC3  30 AlclylngqykrAyellrka.klnskslgcrylfAqcllkL.kkyeeAiaaL 79 
                 +  +y+ +qy  A++ +++a +ln+   +++y ++  +    +++ +A++a+
  KHJ30074.1 336 GVLYYQINQYRDALDAYSRAiRLNPFISEVWYDLGTLYESCnNQISDALDAY 387
                 6678888888888888888888888777777777766666656666666666 PP

>> TPR_21  Tetratricopeptide repeat-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.67   5.2e+02     162     181 ..      61      80 ..      51      86 .. 0.79
   2 !   10.2   0.3   0.00056      0.44     119     178 ..      85     145 ..      62     152 .. 0.82
   3 !   13.1   0.0   7.3e-05     0.057      90     183 ..     163     259 ..     160     266 .. 0.88
   4 !    9.5   0.2   0.00095      0.74     130     178 ..     278     327 ..     270     343 .. 0.86
   5 ?   -0.1   0.1      0.85   6.6e+02     160     188 ..     378     404 ..     371     409 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.67
      TPR_21 162 ldeAraaYqaAlaaleekar 181
                  +eA +aY++Al+a+  +++
  KHJ30074.1  61 PEEAMNAYEHALRANPRSTQ 80 
                 689**********9988765 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00056
      TPR_21 119 LarvllaekkydeAlktLeakke.eafaalvaelrGDilvaqgkldeAraaYqaAlaalee 178
                 +  +l  ++++ +A++ L++  + e  +++v    G  ++ +++l++A +aYq+Al +l +
  KHJ30074.1  85 MSGILRSQEQFLKAVEYLQNILKvEPNNGEVWGSLGHCYLMMDDLQQAYTAYQQALYHLRD 145
                 67788889999999999988754267889999999*********************98765 PP

  == domain 3  score: 13.1 bits;  conditional E-value: 7.3e-05
      TPR_21  90 gdlaaAkaqLewvlekakdeelkalarlRLarvllaekkydeAlktLeakkeeafaalvae....lrGDilvaqgkldeAraaYqaAlaaleekarel 183
                 g l++A++++++v+  ++d e ++ +  RL  ++ ++ ky + l+      +   a l +e      G ++ +q++l++A+ aYq+ l++  ++a ++
  KHJ30074.1 163 GSLDHAEEAFSQVMRMQPDFEKANEIYFRLGIIYKQQHKYHQSLECFRYIVALPPAPLTEEdiwfQIGHVYEQQKELENAKMAYQRVLDRDPNHA-KV 259
                 67999***************9999*********************9998888888888877444457**********************999885.33 PP

  == domain 4  score: 9.5 bits;  conditional E-value: 0.00095
      TPR_21 130 deAlktL.eakkeeafaalvaelrGDilvaqgkldeAraaYqaAlaalee 178
                 ++Al+ L ++++++  +a+   l G  ++aq k  +A +aYq+A+ + ++
  KHJ30074.1 278 EQALEYLeKSVNSDPSDAQTWYLLGRCYMAQQKYPKAYEAYQQAVYRDGK 327
                 78999993345667789999999*********************987766 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 0.85
      TPR_21 160 gkldeAraaYqaAlaaleekarellqlKl 188
                 +++ +A +aYq+A +  +++  + ++ +l
  KHJ30074.1 378 NQISDALDAYQRAAELDQNN--PHIKARL 404
                 67889999999998877776..5555555 PP

>> ChAPs  ChAPs (Chs5p-Arf1p-binding proteins)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.1   0.00031      0.24     218     289 ..      63     134 ..      32     139 .. 0.86
   2 !   19.2   0.1   6.3e-07   0.00049     213     287 ..     235     314 ..     202     319 .. 0.85
   3 ?    0.4   0.0      0.33   2.6e+02     248     295 ..     343     391 ..     337     429 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00031
                 HHHHHHHHHH-SSS-HHHHHHHHHHHHHHSS--HHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHH CS
       ChAPs 218 davkllneeleeeekdaelLllqaefllskkkeelAlevakravksaPsefktWalLvkvYikledienALl 289
                 +a++  +++l+ ++++++ +++ +  l s+++   A+e  ++  k+ P++ + W  L ++Y+ ++d+++A +
  KHJ30074.1  63 EAMNAYEHALRANPRSTQAMSAMSGILRSQEQFLKAVEYLQNILKVEPNNGEVWGSLGHCYLMMDDLQQAYT 134
                 688888999***********************************************************9976 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 6.3e-07
                 TT-HHHHHHHHHHHH-SS.S-HHHHHHHHHHHHHHSS--.....HHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHH CS
       ChAPs 213 adeEvdavkllneeleee.ekdaelLllqaefllskkke.....elAlevakravksaPsefktWalLvkvYikledienA 287
                 +++E++  k+ ++ + ++ ++ a++L  q  +l +++++     e Ale  +++v+s Ps+ +tW+lL ++Y++++ + +A
  KHJ30074.1 235 QQKELENAKMAYQRVLDRdPNHAKVL-QQLGWLYHQQSQsfncqEQALEYLEKSVNSDPSDAQTWYLLGRCYMAQQKYPKA 314
                 57899999999888755505555555.5888888887777888899****************************9987766 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.33
                 S--HHHHHHHHHHHHH-TT-HHHHHHHHHHHHHT.T-HHHHHHHHHT-- CS
       ChAPs 248 kkeelAlevakravksaPsefktWalLvkvYikl.edienALltLNscP 295
                 ++++ Al++ +ra+++ P  ++ W+ L   Y +  ++i++AL +     
  KHJ30074.1 343 NQYRDALDAYSRAIRLNPFISEVWYDLGTLYESCnNQISDALDAYQRAA 391
                 56677999999********************886257899987665555 PP

>> BTAD  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.3   0.00017      0.13      59     128 ..      76     145 ..      52     147 .. 0.85
   2 !   11.3   0.5   0.00044      0.34      74     122 ..     273     321 ..     256     324 .. 0.92
   3 !    7.1   0.1    0.0086       6.7      74     124 ..     341     392 ..     335     397 .. 0.85
   4 ?   -0.5   0.1       1.9   1.5e+03      47      66 ..     789     808 ..     764     810 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00017
                 HHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
        BTAD  59 elrlealealaeaelrlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYerlrrlLae 128
                  +  +a+ a+   + + ++  +a+++l+++++ +P + + +  l  ++  +++ ++A ++Y+++  +L++
  KHJ30074.1  76 PRSTQAMSAMSGILRSQEQFLKAVEYLQNILKVEPNNGEVWGSLGHCYLMMDDLQQAYTAYQQALYHLRD 145
                 455667777777777889999******************************************9999986 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00044
                 HTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHHH CS
        BTAD  74 rlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYerl 122
                 ++++ e+al++le+ v+ +P + +++ +l r+++++ +  +A e+Y+++
  KHJ30074.1 273 SFNCQEQALEYLEKSVNSDPSDAQTWYLLGRCYMAQQKYPKAYEAYQQA 321
                 67899******************************************97 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0086
                 HTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-H.HHHHHHHHHHHH CS
        BTAD  74 rlGraeealaelealvaehPlrErlhrqlmrAlarsGrq.aeALevYerlrr 124
                 +++++++al+ ++++++++P+  + +  l + +  +++q ++AL +Y+r+ +
  KHJ30074.1 341 QINQYRDALDAYSRAIRLNPFISEVWYDLGTLYESCNNQiSDALDAYQRAAE 392
                 578899***************99999999888877665449*******9865 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 1.9
                 STTHHHHHHHHHHHHHHHHH CS
        BTAD  47 gewleaererleelrleale 66 
                 +++  +e++r+ee+r+ a+e
  KHJ30074.1 789 FRRSSSEVRRIEEQRIPAHE 808
                 6678899*********9998 PP

>> TPR_20  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.1    0.0039         3       7      59 ..      64     114 ..      61     143 .. 0.78
   2 ?    1.1   0.1      0.64     5e+02      11      51 ..     246     286 ..     235     287 .. 0.84
   3 !   13.6   0.0   8.4e-05     0.065       6      52 ..     279     325 ..     274     330 .. 0.88
   4 ?    1.5   0.0       0.5   3.9e+02      10      44 ..     317     351 ..     315     360 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0039
      TPR_20   7 elaeleaalaanpddldarldlAlallaagryeeAleqLleilkrdrkwedda 59 
                  + + e al anp   +a+ +++  l ++++  +A+e L +ilk + +   ++
  KHJ30074.1  64 AMNAYEHALRANPRSTQAMSAMSGILRSQEQFLKAVEYLQNILKVEPNN--GE 114
                 578899*************************************976654..55 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.64
      TPR_20  11 leaalaanpddldarldlAlallaagryeeAleqLleilkr 51 
                  ++ l  +p+  +   +l  +++++++     eq le l++
  KHJ30074.1 246 YQRVLDRDPNHAKVLQQLGWLYHQQSQSFNCQEQALEYLEK 286
                 46667899*******************99888888888875 PP

  == domain 3  score: 13.6 bits;  conditional E-value: 8.4e-05
      TPR_20   6 pelaeleaalaanpddldarldlAlallaagryeeAleqLleilkrd 52 
                 + l+ le+ ++++p+d ++ + l + ++a+++y +A e+  + + rd
  KHJ30074.1 279 QALEYLEKSVNSDPSDAQTWYLLGRCYMAQQKYPKAYEAYQQAVYRD 325
                 67899*******************************99876666665 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.5
      TPR_20  10 eleaalaanpddldarldlAlallaagryeeAleq 44 
                 + ++a+  + ++    +    ++++ ++y++Al++
  KHJ30074.1 317 AYQQAVYRDGKNPTFWCSIGVLYYQINQYRDALDA 351
                 567788888888888899999************97 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.7   0.00011     0.089      18     150 ..      96     177 ..      56     210 .. 0.54
   2 ?    5.7   0.1      0.01       8.1      21     109 ..     277     358 ..     257     364 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00011
    TPR_MalT  18 eralelArqALallpeddllariaatavlGeasllqGdleaAlqalqeaeklarqadslhvallallqqaeilvaqGrLheAletyeqalqlateqglq 116
                  +a+e+ +++L+  p++       +  +lG                                          + +  +L++A+  y+qal + ++++++
  KHJ30074.1  96 LKAVEYLQNILKVEPNNG-----EVWGSLG----------------------------------------HCYLMMDDLQQAYTAYQQALYHLRDPKEP 149
                 333333333333333322.....2333444........................................44455556666666666666666666666 PP

    TPR_MalT 117 qlplvgfllvlladllyEwndLeeAeqhlqeGie 150
                 +l  +     + + l+   + L++Ae++  + ++
  KHJ30074.1 150 KL--WY----GIGILYDRYGSLDHAEEAFSQVMR 177
                 42..11....113333334444444444444333 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.01
    TPR_MalT  21 lelArqALallpeddllariaatavlGeasllqGdleaAlqalqeaeklarqadslhvallallqqaeilvaqGrLheAletyeqalql 109
                 +e+A + L+ + ++d ++ +++ ++lG+ ++ q + ++A +a+q+a++   + +++++  +  ++++ ++ + ++ ++Al+ y +a++l
  KHJ30074.1 277 QEQALEYLEKSVNSD-PSDAQTWYLLGRCYMAQQKYPKAYEAYQQAVYR--DGKNPTF--W--CSIGVLYYQINQYRDALDAYSRAIRL 358
                 444444444444444.667888899999999999999999999998764..4555552..2..33344555555666688888888887 PP

>> DUF2225  Uncharacterized protein conserved in bacteria (DUF2225)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       5.5   4.3e+03     142     170 ..      62     102 ..      56     113 .. 0.72
   2 !    9.3   0.0    0.0011      0.83     141     195 ..     129     179 ..     117     192 .. 0.87
   3 !    7.7   0.7    0.0035       2.7     112     194 ..     251     358 ..     237     365 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 5.5
     DUF2225 142 kkAlelykeayekesfpvegideat............vlYL 170
                 ++A++ y++a+  + ++++ +++ +            v YL
  KHJ30074.1  62 EEAMNAYEHALRANPRSTQAMSAMSgilrsqeqflkaVEYL 102
                 57899999999999999988888875555555555555555 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0011
     DUF2225 141 lkkAlelykeayekesfpvegideatvlYLiaeLerrlgnkeealrwlskvigsk 195
                 l++A+  y++a+++ ++p     e ++ Y i+ L  r+g+ ++a +++s+v++++
  KHJ30074.1 129 LQQAYTAYQQALYHLRDPK----EPKLWYGIGILYDRYGSLDHAEEAFSQVMRMQ 179
                 7899999999999999965....568*************************9976 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0035
     DUF2225 112 ekkskkAklalrlAWlyrdked.....................eekeklfl...kkAlelykeayekesfpve.gideatvlYLiaeLerrlgnkeeal 185
                  ++ + Ak++ +l+Wly ++ +                     +++  ++l     A + y +aye  ++ v+   ++ t    i+ L +++ ++++al
  KHJ30074.1 251 DRDPNHAKVLQQLGWLYHQQSQsfncqeqaleyleksvnsdpsDAQTWYLLgrcYMAQQKYPKAYEAYQQAVYrDGKNPTFWCSIGVLYYQINQYRDAL 349
                 44558999999*******999999999999999999999988633333333222347777777777777776634455667777899999999999999 PP

     DUF2225 186 rwlskvigs 194
                  ++s+ i+ 
  KHJ30074.1 350 DAYSRAIRL 358
                 999998875 PP

>> Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       3.8     3e+03      19      38 ..      63      82 ..      62      83 .. 0.86
   2 ?    8.1   0.0    0.0036       2.8      16      35 ..      94     113 ..      90     116 .. 0.87
   3 ?   -0.1   0.0       1.3     1e+03      13      38 ..     161     186 ..     152     188 .. 0.85
   4 ?   -0.4   0.0       1.6   1.2e+03      13      34 ..     235     256 ..     224     263 .. 0.81
   5 ?   -1.8   0.0       4.4   3.4e+03      18      37 ..     278     297 ..     278     303 .. 0.87
   6 ?    0.5   0.0      0.85   6.6e+02      11      32 ..     339     360 ..     331     365 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 3.8
                HHHHHHHHHHHHTTS-HHHH CS
  Fis1_TPR_C 19 eArryvdalLeiEPenrQaq 38
                eA++  +  L+  P+  Qa 
  KHJ30074.1 63 EAMNAYEHALRANPRSTQAM 82
                79999999999999999996 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0036
                 -HHHHHHHHHHHHHHTTS-H CS
  Fis1_TPR_C  16 eYseArryvdalLeiEPenr 35 
                 ++ +A +y++ +L++EP+n 
  KHJ30074.1  94 QFLKAVEYLQNILKVEPNNG 113
                 5679**************96 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 1.3
                 HHT-HHHHHHHHHHHHHHTTS-HHHH CS
  Fis1_TPR_C  13 klgeYseArryvdalLeiEPenrQaq 38 
                 + g  + A +   ++++++P+++ a+
  KHJ30074.1 161 RYGSLDHAEEAFSQVMRMQPDFEKAN 186
                 677888999999**********9886 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 1.6
                 HHT-HHHHHHHHHHHHHHTTS- CS
  Fis1_TPR_C  13 klgeYseArryvdalLeiEPen 34 
                  ++e ++A+   +++L  +P+ 
  KHJ30074.1 235 QQKELENAKMAYQRVLDRDPNH 256
                 57999**************986 PP

  == domain 5  score: -1.8 bits;  conditional E-value: 4.4
                 HHHHHHHHHHHHHTTS-HHH CS
  Fis1_TPR_C  18 seArryvdalLeiEPenrQa 37 
                 ++A++y++   + +P+  Q 
  KHJ30074.1 278 EQALEYLEKSVNSDPSDAQT 297
                 589************99996 PP

  == domain 6  score: 0.5 bits;  conditional E-value: 0.85
                 HHHHT-HHHHHHHHHHHHHHTT CS
  Fis1_TPR_C  11 hyklgeYseArryvdalLeiEP 32 
                 +y + +Y++A+    + +++ P
  KHJ30074.1 339 YYQINQYRDALDAYSRAIRLNP 360
                 899********99999988877 PP

>> SNAP  Soluble NSF attachment protein, SNAP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.4     0.049        38      63     142 ..      53     140 ..      33     177 .. 0.53
   2 ?    0.8   8.4      0.34   2.7e+02     108     184 ..     251     324 ..     165     360 .. 0.55
   3 ?    6.0   0.3    0.0087       6.8     118     147 ..     367     396 ..     342     412 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.049
                 HHHHHTT-HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHTT.............--HHHHHHHHHHHH CS
        SNAP  63 ecqeklkekdeaanayveAakcykkvspeeAvealekAieiytekgrfrraAklkkeiaelyekel.............gdlekAieaYekAa 142
                 ++ e l+ ++ea nay  A  +  ++      +a+++   i+ ++++f +a ++ ++i ++  ++              +dl++A  aY++A 
  KHJ30074.1  53 SLAEVLNCPEEAMNAYEHALRANPRS-----TQAMSAMSGILRSQEQFLKAVEYLQNILKVEPNNGevwgslghcylmmDDLQQAYTAYQQAL 140
                 44444444444444444444443333.....33333333333333333333333333333333322222222233333356777777777765 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.34
                 T-HHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHTT.-HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHT CS
        SNAP 108 grfrraAklkkeiaelyekelgdlekAieaYekAaelyeqee.akalankcllkvAelsaelekyekAieiyekvakk 184
                 +r  + Ak  ++++ ly ++    +++ ++ e+A e+ e+   +  +  + +  +   +  ++ky+kA+e+y++   +
  KHJ30074.1 251 DRDPNHAKVLQQLGWLYHQQ----SQSFNCQEQALEYLEKSVnSDPSDAQTWYLLGRCYMAQQKYPKAYEAYQQAVYR 324
                 34445566666666666665....555555566666555554344455555555555556666666666666655443 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0087
                 HHHHHHHHHTT--HHHHHHHHHHHHHHHHH CS
        SNAP 118 keiaelyekelgdlekAieaYekAaelyeq 147
                  +++ lye+  +++++A++aY++Aael ++
  KHJ30074.1 367 YDLGTLYESCNNQISDALDAYQRAAELDQN 396
                 68999*****9**************97555 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.72   5.6e+02      20      32 ..      61      73 ..      53      74 .. 0.83
   2 ?    0.8   0.0      0.67   5.2e+02      29      42 ..      97     112 ..      93     115 .. 0.80
   3 ?    1.9   0.4      0.31   2.4e+02      19      34 ..     128     143 ..     127     145 .. 0.86
   4 ?   -0.3   0.0       1.4   1.1e+03      28      47 ..     278     296 ..     269     308 .. 0.69
   5 ?    6.0   1.4     0.015        12      17      31 ..     308     322 ..     305     323 .. 0.92
   6 ?    2.7   0.1      0.17   1.3e+02      18      33 ..     343     358 ..     336     360 .. 0.88
   7 ?    1.7   0.1      0.34   2.7e+02      20      33 ..     380     393 ..     376     402 .. 0.68

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.72
         MIT 20 yeeAlelYkeale 32
                 eeA+++Y++al+
  KHJ30074.1 61 PEEAMNAYEHALR 73
                69*********96 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.67
         MIT  29 ealelLlqalk.e.kn 42 
                 +a+e+L+ +lk e +n
  KHJ30074.1  97 KAVEYLQNILKvEpNN 112
                 8**********88554 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.31
         MIT  19 nyeeAlelYkealelL 34 
                 + + A+ +Y++al +L
  KHJ30074.1 128 DLQQAYTAYQQALYHL 143
                 5799********9887 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 1.4
         MIT  28 kealelLlqalkekneerre 47 
                 ++ale+L + ++ +++++ +
  KHJ30074.1 278 EQALEYLEKSVN-SDPSDAQ 296
                 688999988887.4444444 PP

  == domain 5  score: 6.0 bits;  conditional E-value: 0.015
         MIT  17 agnyeeAlelYkeal 31 
                 +++y++A+e+Y++a+
  KHJ30074.1 308 QQKYPKAYEAYQQAV 322
                 69***********97 PP

  == domain 6  score: 2.7 bits;  conditional E-value: 0.17
         MIT  18 gnyeeAlelYkealel 33 
                 ++y +Al++Y+ a++l
  KHJ30074.1 343 NQYRDALDAYSRAIRL 358
                 79***********975 PP

  == domain 7  score: 1.7 bits;  conditional E-value: 0.34
         MIT  20 yeeAlelYkealel 33 
                 +++Al++Y+ a el
  KHJ30074.1 380 ISDALDAYQRAAEL 393
                 56666666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (917 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1298  (0.0723967); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                       142  (0.00792013); expected 17.9 (0.001)
Passed Fwd filter:                        67  (0.00373696); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 1.26u 0.33s 00:00:01.59 Elapsed: 00:00:00.57
# Mc/sec: 4832.17
//
Query:       KHJ30075.1  [L=341]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       645  (0.0359752); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2478.72
//
Query:       KHJ30076.1  [L=427]
Description: putative udp-galactose transporter like protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.2e-47  161.2  15.3      4e-47  160.9  15.3    1.1  1  UAA             UAA transporter family
    4.3e-07   29.4   1.6    8.2e-05   21.9   0.1    2.2  2  Nuc_sug_transp  Nucleotide-sugar transporter
    1.6e-06   28.3  30.8    1.8e-05   24.9  12.5    3.8  3  EamA            EamA-like transporter family
  ------ inclusion threshold ------
       0.36   10.9   0.1       0.36   10.9   0.1    2.9  2  DUF2892         Protein of unknown function (DUF2892)
       0.68   10.3   4.7         11    6.4   1.3    2.7  2  DUF1774         Fungal protein of unknown function (DUF1774)


Domain annotation for each model (and alignments):
>> UAA  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.9  15.3   1.1e-50     4e-47       2     298 ..      70     403 ..      69     407 .. 0.86

  Alignments for each domain:
  == domain 1  score: 160.9 bits;  conditional E-value: 1.1e-50
         UAA   2 lllavslvfvgccsnvvllElivkeepkafg........nlltfvqflfvalegllesid.......i.......lkkrkiPlktYvilvalffitsvl 78 
                 +l++vs++++++++++ l+E++ ++ ++++          +l+ +q lf a++g+   ++       i       +++  +P    ++++a+  + s  
  KHJ30076.1  70 FLIVVSGIYGSFLTWALLQERLTTTPYGSITspeffkfpVFLNTIQSLFAAFVGYAYLRQskgkkdgIstlpifpNRRILVP---LLLVAATSSLASPF 165
                 799*********************88888779**************999999999766666666555244554333333333...36677777788888 PP

         UAA  79 nnealkydisvPvhiifrssklipvmilGililgkrYsllqylsvllltlGviiftllsakdk..kedskeslnkfllGiallvlallldavlglvqek 175
                  + +l+  i + + i+++s+kl+pvm+l + + +krY l +yl+++ +t+Gv iftl+ a+ k  +++s++s  ++++G++ll ++ll+d++++++q+ 
  KHJ30076.1 166 GYASLSH-IDYITFILAKSCKLLPVMFLNVTLFQKRYPLYKYLVIFAVTAGVAIFTLYAASPKktSKQSTSSERNSSWGLFLLGINLLFDGLTNTTQDY 263
                 9******.*************************************************999888777788889999************************ PP

         UAA 176 lykkygkhsk.ealfyshllslplfl........llqgellsavkflsesedval..............lslpsklfylllnvltqyvcikgVlilise 251
                 +++ ++  +  +++  ++++s++l+l        + ++ + +          +                   p+ + ++l +++++++++ +++++ s+
  KHJ30076.1 264 IFQTFQPYTGpQMMCANNIISTLLTLsylsfspyFTETGIGKSLG------LKLTsgsgseftqalafmARYPKVWADVLGFSICGAIGQIFIFYTLST 356
                 *******99989***************966666544444444333......333334444467889998999*************************** PP

         UAA 252 fgaltvtlvltlRKfvslllSillFknpltlqhlvgtllVflgllly 298
                 f++l +++++ +RK+++++lS+++F+++l   +++g+ lVf+g+ ++
  KHJ30076.1 357 FSSLLLVTITLTRKMLTMILSVIWFGHNLVKAQWIGVGLVFGGIGAE 403
                 *******************************************9876 PP

>> Nuc_sug_transp  Nucleotide-sugar transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.1   2.3e-08   8.2e-05      92     188 ..     158     253 ..     103     264 .. 0.82
   2 !    6.8   0.1   0.00091       3.3     114     152 ..     365     402 ..     327     426 .. 0.70

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 2.3e-08
  Nuc_sug_transp  92 iYtvqnnllyvalsnLdaatyqvtyqlkilttalfsvllLkrklskkqWlslllLvaGvalvqlkqkeseesekaaaaakeensvlGliavlaac 186
                        +   + y +ls++d  t+ ++   k+l   ++ v+l +++   +++l ++ ++aGva+  l  ++ ++++k +++++e+ns  Gl  + +  
      KHJ30076.1 158 TSSLASPFGYASLSHIDYITFILAKSCKLLPVMFLNVTLFQKRYPLYKYLVIFAVTAGVAIFTLYAASPKKTSK-QSTSSERNSSWGLFLLGINL 251
                     4445556679***************************************************9998887766555.6666799**99998766666 PP

  Nuc_sug_transp 187 ll 188
                     l 
      KHJ30076.1 252 LF 253
                     55 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.00091
  Nuc_sug_transp 114 vtyqlkilttalfsvllLkrklskkqWlslllLvaGval 152
                     +t   k+l t ++sv+  +++l k qW+ + l++ G+  
      KHJ30076.1 365 ITLTRKML-TMILSVIWFGHNLVKAQWIGVGLVFGGIGA 402
                     34444555.67999*********************9953 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.2   0.5    0.0062        22      66     129 ..      71     143 ..      54     144 .. 0.75
   2 !    9.0   6.6   0.00041       1.5      30     135 ..     108     219 ..      92     221 .. 0.92
   3 !   24.9  12.5   5.1e-09   1.8e-05      63     132 ..     332     400 ..     241     402 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0062
        EamA  66 lllllgllgtvlafllffyalkktsas.........naslitslePvftlilsvlllgekltlkqllgivlil 129
                 l+++ g+ g++l++ l+   l++t+ +         + +++++++ +f+++ ++++l+++ ++k+ ++++ i+
  KHJ30076.1  71 LIVVSGIYGSFLTWALLQERLTTTPYGsitspeffkFPVFLNTIQSLFAAFVGYAYLRQSKGKKDGISTLPIF 143
                 4566666677777777666666666666666666655567899999999999999999999999999998876 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00041
        EamA  30 pltltfvrfliagillliiallkegkl......aklslkdwllllllgllgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltlkql 122
                 p++l+++++l+a+++  +++  ++gk+      + ++ + +l  lll +  + la  + + +l++++  +  l+ s   + +++l v l++++  l+++
  KHJ30076.1 108 PVFLNTIQSLFAAFVGYAYLRQSKGKKdgistlPIFPNRRILVPLLLVAATSSLASPFGYASLSHIDYITFILAKSCKLLPVMFLNVTLFQKRYPLYKY 206
                 7899999999999999888888888889999999999999****9999999999999****************************************** PP

        EamA 123 lgivlillGvlli 135
                 l i+ + +Gv++ 
  KHJ30076.1 207 LVIFAVTAGVAIF 219
                 **********986 PP

  == domain 3  score: 24.9 bits;  conditional E-value: 5.1e-09
        EamA  63 dwllllllgllgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGv 132
                  w+ +l ++ ++++++++++fy l++ s+   + it++  ++t+ilsv+++g +l + q++g++l++ G+
  KHJ30076.1 332 VWADVLGFS-ICGAIGQIFIFYTLSTFSSLLLVTITLTRKMLTMILSVIWFGHNLVKAQWIGVGLVFGGI 400
                 466666666.69********************************************************98 PP

>> DUF2892  Protein of unknown function (DUF2892)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   9.9e-05      0.36      14      50 ..     212     258 ..     209     260 .. 0.89
   2 ?   -1.9   2.3      0.99   3.5e+03      20      48 ..     374     400 ..     360     402 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 9.9e-05
     DUF2892  14 ivvGlvllllallglsggw..........gwllglvGavllltgltg 50 
                 +++G+++++l++++  +             w l l+G++ll+ glt+
  KHJ30076.1 212 VTAGVAIFTLYAASPKKTSkqstssernsSWGLFLLGINLLFDGLTN 258
                 68999999999999976669999**********************97 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.99
     DUF2892  20 llllallglsggw..gwllglvGavllltgl 48 
                 ++l++++++++ +  +w    +G++l++ g+
  KHJ30076.1 374 MILSVIWFGHNLVkaQW----IGVGLVFGGI 400
                 34444444444335566....8888888765 PP

>> DUF1774  Fungal protein of unknown function (DUF1774)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.015        53      45      83 ..     199     237 ..     175     242 .. 0.74
   2 ?    6.4   1.3     0.003        11       6      78 ..     348     416 ..     332     426 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.015
     DUF1774  45 tkvialQwifafviaavlfvlslvvavakllgreeeaee 83 
                 ++     ++  f+++a + +++l++a +k + ++++++e
  KHJ30076.1 199 KRYPLYKYLVIFAVTAGVAIFTLYAASPKKTSKQSTSSE 237
                 444455677788899999999999999999999854433 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.003
     DUF1774   6 vfiwailvvglffivaykDytlgfslslLslalgvgQlltkvialQwifafviaavlfvlslvvavakllgre 78 
                 +fi+  l   +  ++    +t++++  +L++ l+v  + +++++ Qwi   ++++ +   ++++ ++k ++ +
  KHJ30076.1 348 IFIFYTLSTFSSLLL----VTITLTRKMLTMILSVIWFGHNLVKAQWIGVGLVFGGIGAETIIARLEKASKAK 416
                 444444444443333....58999999*********************9999999999999999888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1071  (0.0597356); expected 358.6 (0.02)
Passed bias filter:                      564  (0.0314574); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 2969.60
//
Query:       KHJ30077.1  [L=412]
Description: putative argininosuccinate synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.3e-150  501.2   0.0   2.7e-150  501.0   0.0    1.0  1  Arginosuc_synth  Arginosuccinate synthase
     0.0074   15.8   0.0      0.012   15.1   0.0    1.3  1  QueC             Queuosine biosynthesis protein QueC
  ------ inclusion threshold ------
      0.049   12.4   0.0      0.081   11.7   0.0    1.4  1  tRNA_Me_trans    tRNA methyl transferase


Domain annotation for each model (and alignments):
>> Arginosuc_synth  Arginosuccinate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  501.0   0.0  4.4e-154  2.7e-150       1     387 [.       7     401 ..       7     402 .. 0.97

  Alignments for each domain:
  == domain 1  score: 501.0 bits;  conditional E-value: 4.4e-154
  Arginosuc_synth   1 vLaysGGlDtsviikllkeklgeeviavavdvGqeeedldevkekalklgavksvvvDakeefvedyifpaikanalYedrYllgtalaRPlia 94 
                      +LaysGGlDts+i+++l ek+ ++v+ ++ dvGqe ed++++k+kalk+gav  ++ D k+ef+e+ +fpai+ na+Ye+ Yllgt+laRP+ia
       KHJ30077.1   7 CLAYSGGLDTSCILAWLIEKG-YDVVCYMGDVGQE-EDFEAAKAKALKIGAVACYIEDLKKEFIEKLCFPAIQCNAIYENVYLLGTSLARPVIA 98 
                      79******************9.*************.********************************************************** PP

  Arginosuc_synth  95 kklvevakkegaeavahGctGkGnDqvRfevsirslaPdlkviaPvRelelt.....ReeeieyakekgipvevtkkkpysiDenllgrsieag 183
                      + ++ va+ke++ avahGctGkGnDqvRfe++ ++l+P++kviaP+R +e++     R++ ++ya++ gipv +tk+kp+s+Denl++ s+eag
       KHJ30077.1  99 RSQIRVAQKENCFAVAHGCTGKGNDQVRFELAYYALEPKIKVIAPWRLPEFYqrfpgRKDLLDYAERVGIPVTSTKSKPWSMDENLVHCSYEAG 192
                      ********************************************************************************************** PP

  Arginosuc_synth 184 iLedpknappediyeltkdpakapdepeeveiefekGvPvald..gee.lsvlelieklneiagkhGvGRiDivedRlvglksReiYeapaalv 274
                      iLedp+++pp+d+++lt +p kapdepe+ ++ fekG+P ++   +++ +++ el+ ++n ia++hG+GR+Dive+R++g+ksR++Ye+p+ + 
       KHJ30077.1 193 ILEDPDMTPPDDMWKLTISPLKAPDEPEDFTLFFEKGIPKKIVtsSKTvTDPGELFFEINTIARRHGIGRTDIVENRFIGIKSRGCYETPGFTC 286
                      ***************************************999744333134599**************************************** PP

  Arginosuc_synth 275 Likahkdlekltlerevakfkkivee.kyaelvYkGlwfsPlkealdafiektqervtGtvrvklfkGsvvvlgResees.lYdeelasydeed 366
                      L+ ah dle l+l+rev+ +++++ + +ya+++Y+Gl+fsP++e l++ ie +q++v+G+vr + +kG++++lgR+se++ lYd+  +s+de  
       KHJ30077.1 287 LRLAHIDLEGLVLDREVRALRDQFVTfNYAKILYNGLYFSPEREFLESSIEASQKSVNGQVRCRAYKGNLIILGRSSETEkLYDACESSMDEIG 380
                      *********************9876526**************************************************988************* PP

  Arginosuc_synth 367 efdqkeaeGfikihglqakly 387
                      +f + + +Gfi+i++++ k+y
       KHJ30077.1 381 DFSPIDSTGFISIQAIRLKKY 401
                      ******************998 PP

>> QueC  Queuosine biosynthesis protein QueC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0     2e-06     0.012       4      48 ..       8      52 ..       5      80 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2e-06
                EE--SSHHHHHHHHHHHHH-SEEEEEEEESS-TTSHHHHHHHHHH CS
        QueC  4 vllSGGlDSttvlalakkegkevealtfdYgqrhkkeleaakkia 48
                +  SGGlD + +la+  ++g+ v +   d gq ++ e  +ak++ 
  KHJ30077.1  8 LAYSGGLDTSCILAWLIEKGYDVVCYMGDVGQEEDFEAAKAKALK 52
                557********************************9999999875 PP

>> tRNA_Me_trans  tRNA methyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.4e-05     0.081       1      42 [.       4      45 ..       4      78 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.4e-05
  tRNA_Me_trans  1 kkvvvalSgGVDSsvaaallkeqgyevigvflklweeedeeg 42
                   +kv+ a SgG D s  +a l e+gy+v+  +  + +eed e 
     KHJ30077.1  4 QKVCLAYSGGLDTSCILAWLIEKGYDVVCYMGDVGQEEDFEA 45
                   5899***********************965444444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       344  (0.0191868); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 3024.86
//
Query:       KHJ30078.1  [L=200]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       702  (0.0391544); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1422.95
//
Query:       KHJ30079.1  [L=524]
Description: putative triose-phosphate transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-19   70.7  15.6    2.3e-19   69.9  15.6    1.4  1  TPT        Triose-phosphate Transporter family
    5.7e-05   23.3  39.5     0.0018   18.4   3.4    3.0  3  EamA       EamA-like transporter family
     0.0022   17.9   1.4     0.0067   16.3   0.0    2.2  2  DUF5079    Domain of unknown function (DUF5079)
  ------ inclusion threshold ------
      0.048   12.4   0.6      0.063   12.0   0.6    1.1  1  Caldesmon  Caldesmon
      0.056   12.7  15.3       0.91    8.7  15.3    2.5  1  PUNUT      Purine nucleobase transmembrane transport
        8.8    6.7   7.2        1.4    9.2   2.0    2.4  2  DUF3040    Protein of unknown function (DUF3040)


Domain annotation for each model (and alignments):
>> TPT  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.9  15.6   7.7e-23   2.3e-19       4     290 .]     132     455 ..     129     455 .. 0.85

  Alignments for each domain:
  == domain 1  score: 69.9 bits;  conditional E-value: 7.7e-23
         TPT   4 gllfllWYllnvvfnilnKkilnvf....pyPltvsavqllvgsvlilvlwal..glkk...........................rpkisse.flkai 68 
                 g+l++lWY+++++  i+nK ++  +    ++Pl++++++++v   l+++++ +  +++                            +  +s++ +l+ i
  KHJ30079.1 132 GMLITLWYTFSLFISIYNKWMFDPThldfHFPLFTTCLHMVVQFFLSFLVLCImpQFRPqhepnlhkiskatdpeeempqeaekswISLMSTKyYLTHI 230
                 7899******************97656669**********99988765555442344448899******************99887555666679999* PP

         TPT  69 lplalvktlghvlavvslskvaVSfthtvKasePiFtvilsrlllgeklsllvylsLlpivgGvalasvtElsFnligfisAlisnltfslrnifsKkl 167
                  p +++  l   l+++sl+ ++  f  + K+s  +F   ++ l+  e +s+ ++l + ++  Gv +  + E +F  +gfi  +++ +++ +r  +   l
  KHJ30079.1 231 GPCGIATGLDIGLGNMSLKFISLTFYTMCKSSSLAFILFFAFLFRLEPPSTRLVLIIAVMTLGVLMMVAGETKFSPLGFILVILAAFFSGFRWGLTQIL 329
                 *************************************9999999999999999999999999*********************************9999 PP

         TPT 168 lkklkdldalnlfaiitilslllllPvall...vegvlktpsllkst..kvslkevllllllsgvlfhlynqvaymvLervspvthsvantvKrvvvIv 261
                 l ++    ++n f+ i +l+ +++l + ll   +eg+ +  + ++    k++l   + lll  g + +      +++L+r+s vt s+a   K +v I+
  KHJ30079.1 330 LLTN--PATSNPFSSIFFLAPVMFLGLFLLaipIEGLSNLSAGYQVLieKNGLILGTSLLLFPGTIAFCMTASEFALLQRTSVVTLSIAGIFKEIVTIT 426
                 9983..566777777777777777766554222566555555555553223344445688999************************************ PP

         TPT 262 lsvlvfknpvsllnaiGtavaivGvflYs 290
                 ++ lvfk++++++n++G  ++++ ++ Y+
  KHJ30079.1 427 SAGLVFKDQLTSINILGLIITLIAIISYN 455
                 ***********************999997 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   1.3      0.33   9.7e+02      38      86 ..     135     182 ..     122     195 .. 0.77
   2 !   18.4   3.4   6.1e-07    0.0018      68     136 ..     230     298 ..     209     299 .. 0.86
   3 !   16.4  19.8   2.7e-06     0.008       2     134 ..     307     453 ..     306     456 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.33
        EamA  38 fliagillliiallkegklaklslkdwllllllgllgtvlafllffyal 86 
                 +++   + l+i+ ++++ +  +++ d+ + l++ +l +v+ f+l f  l
  KHJ30079.1 135 ITLWYTFSLFISIYNKWMF-DPTHLDFHFPLFTTCLHMVVQFFLSFLVL 182
                 4555566788888888888.88888899999999999998888877655 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 6.1e-07
        EamA  68 lllgllgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvllil 136
                 +  + ++t l  +l +++lk +s ++ +++ s + +f+l++++l+  e+++ + +l i+++ lGvl+++
  KHJ30079.1 230 IGPCGIATGLDIGLGNMSLKFISLTFYTMCKSSSLAFILFFAFLFRLEPPSTRLVLIIAVMTLGVLMMV 298
                 4555677888889999**************************************************986 PP

  == domain 3  score: 16.4 bits;  conditional E-value: 2.7e-06
        EamA   2 lgillallaalfwaiyfvlskillrkv....spltltfvrfliagillliiallkegkl.......aklslkdwllllllgllgtvlafllf...fyal 86 
                 lg +l++laa+f+++ + l++ill +     +p++  f+   + ++ l+++a + eg           + +++++l   l l+++++af++    f +l
  KHJ30079.1 307 LGFILVILAAFFSGFRWGLTQILLLTNpatsNPFSSIFFLAPVMFLGLFLLAIPIEGLSnlsagyqVLIEKNGLILGTSLLLFPGTIAFCMTaseFALL 405
                 5899********9999999999965553444666555544444444444443333333334555545667777777799999999999965433399** PP

        EamA  87 kktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvll 134
                 ++ts+ + s++  +  ++t+  + l+++ +lt++ +lg+++ l++++ 
  KHJ30079.1 406 QRTSVVTLSIAGIFKEIVTITSAGLVFKDQLTSINILGLIITLIAIIS 453
                 ********************************************9985 PP

>> DUF5079  Domain of unknown function (DUF5079)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   2.2e-06    0.0067      73     138 ..     120     189 ..     111     218 .. 0.69
   2 ?   -0.8   0.3      0.38   1.1e+03      44     129 ..     441     455 ..     400     474 .. 0.50

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.2e-06
     DUF5079  73 ekykkiekrflv...ilnvlvtitlvlltvslyvf..vvvqfgydlfnywlgiilsliisylllvigGlfl 138
                  +y +  +r +v   ++ +  t++l + + + ++f  + ++f++ lf  +l +++ +++s+l+l i   f 
  KHJ30079.1 120 ANYLV-VRRLIVngmLITLWYTFSLFISIYNKWMFdpTHLDFHFPLFTTCLHMVVQFFLSFLVLCIMPQFR 189
                 45655.45666643333333444444444444567444689*********************999987775 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.38
     DUF5079  44 kvttiielviliisllqwirfidfekekaekykkiekrflvilnvlvtitlvlltvslyvfvvvqfgydlfnywlgiilsliisyl 129
                  + +ii+l+                                                                        iisy 
  KHJ30079.1 441 ILGLIITLIA-----------------------------------------------------------------------IISYN 455
                 2222233222.......................................................................22222 PP

>> Caldesmon  Caldesmon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.6   2.1e-05     0.063       3      87 ..      22     106 ..      20     125 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.1e-05
   Caldesmon   3 DeeeaarErrrrarqerlrsreseepssqsdslvetnshrsevteeaselkssgeegddedqalldrlakreerrqrrlkealer 87 
                 D++++ar +    rq+  rs ++ +  ++s++l +  +  ++ ++ + +  s  +   de+ +l d+ +kr + r rr+ +a+  
  KHJ30079.1  22 DANNIARSKITTTRQNNYRSLSKSRMETDSTDLEQLPEDGTRNEDVVMNYLSDDGPHYDEEVGLIDKGRKRKKMRTRRKINAQSD 106
                 88999**********9999888777777878877777777777777777778888899********************9987433 PP

>> PUNUT  Purine nucleobase transmembrane transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7  15.3    0.0003      0.91      64     319 ..     215     461 ..     198     464 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0003
       PUNUT  64 ttssslslkklvllyiv.lGllvavdnllyslgllylpvstfslilatqLaFtaifsalinkqkftrfiinsvvlltisaallalssssdkpaeeskkk 161
                 ++  sl+++k  l+ i   G+ +++d  l  + l+ +++  +++  +++LaF  +f++l+         ++ + ++t++  +++        a+e+ k 
  KHJ30079.1 215 KSWISLMSTKYYLTHIGpCGIATGLDIGLGNMSLKFISLTFYTMCKSSSLAFILFFAFLFRLEPPSTRLVLIIAVMTLGVLMMV--------AGET-KF 304
                 44455666666666665379999***********************************99876654444444444666666555........2233.55 PP

       PUNUT 162 yvigfiltlaasllfaLlLslvellfekvl.kketfslvlem..qivlslvatvvcvvGll.isGefkelkkeaeeFkkGkslYvlvlvgsavswQvla 256
                    gfil++ a+ + ++   l+++l  +   +++ fs ++ +  +++l l   ++ + Gl   s +++ l  e +   +G s     l++   +   ++
  KHJ30079.1 305 SPLGFILVILAAFFSGFRWGLTQILLLTNPaTSNPFSSIFFLapVMFLGLFLLAIPIEGLSnLSAGYQVL-IEKNGLILGTS----LLLFPGTIAFCMT 398
                 579********************88766652566699886541167777777788888886245555555.46566666655....5666666666899 PP

       PUNUT 257 vGavgLvflvSslfsnvistvllpvvsvlavilfrdkfsavkgvalllailgfasYvYgeyks 319
                     +L+  +S ++  +  +    v+   a ++f+d+++ + ++ l++++++++sY Y ++ +
  KHJ30079.1 399 ASEFALLQRTSVVTLSIAGIFKEIVTITSAGLVFKDQLTSINILGLIITLIAIISYNYIKIRQ 461
                 99********************************************************98776 PP

>> DUF3040  Protein of unknown function (DUF3040)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.0   0.00048       1.4      43      82 ..     281     316 ..     271     320 .. 0.75
   2 ?   -2.1   0.2       1.6   4.8e+03      59      76 ..     414     431 ..     400     452 .. 0.55

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00048
     DUF3040  43 rlavlavllfvaGllllvlG.vaaaavvlgvvGfvvmlagv 82 
                 +++vl ++++ +G+l++v+G +      ++ +Gf+++++++
  KHJ30079.1 281 TRLVLIIAVMTLGVLMMVAGeTK-----FSPLGFILVILAA 316
                 347889999999********433.....5678888776665 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.6
     DUF3040  59 lvlGvaaaavvlgvvGfv 76 
                  ++G+  ++v++  +G+v
  KHJ30079.1 414 SIAGIFKEIVTITSAGLV 431
                 344444444444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (524 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1047  (0.058397); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 3601.98
//
Query:       KHJ30080.1  [L=309]
Description: putative te1b-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-12   46.7   0.0    3.7e-12   46.2   0.0    1.2  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.2   0.0   2.1e-16   3.7e-12      93     178 ..       2      83 ..       1     111 [. 0.85

  Alignments for each domain:
  == domain 1  score: 46.2 bits;  conditional E-value: 2.1e-16
                 G-EEET.........................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHH CS
       RVT_1  93 tafkvptklinliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskske 178
                 +a   p +++++ +sfl++r++ vr++   +  +   +g+pqGs++SPllf l+m e lr+ ++         YaDDi il  +++
  KHJ30080.1   2 QAQEWPNSIHRWTESFLRNRRVQVRFQDGVTDAKELVCGIPQGSPISPLLFLLYMAEPLRRGNT----MAQFSYADDIGILGFGRT 83 
                 56678999******************66656********************************9....68999*****98866555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2218.79
//
Query:       KHJ30081.1  [L=135]
Description: hypothetical protein EV44_g1840 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.5e-37  125.7   0.0    1.1e-36  125.3   0.0    1.1  1  DUF2237   Uncharacterized protein conserved in bacteria (DUF2


Domain annotation for each model (and alignments):
>> DUF2237  Uncharacterized protein conserved in bacteria (DUF2237)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.3   0.0     6e-41   1.1e-36       2     115 .]      11     132 ..      10     132 .. 0.97

  Alignments for each domain:
  == domain 1  score: 125.3 bits;  conditional E-value: 6e-41
                 BTTSSB---S-TTTT-STTSSSS----TT-TT-EEEEEE--HHHHHHHHHCT---SS-BCCCTB----TT-EEEEECHHHHHHHHT............. CS
     DUF2237   2 nvlgeeLelcstdpltGfyrdglCetseeDlGshtvcavvteeFLefskskGndLstpvpefefpGlkpgdrwclcasrwkealea............. 87 
                 n lg++L++ s++p+tG+yr+g+C+++++D G+h+v+a++++ FL+f++s+Gn+L+++       Glk+g++wclca+rw+ea+e              
  KHJ30081.1  11 NALGGQLKKWSSNPVTGYYRNGFCQVGPDDIGNHSVAATLSDPFLDFTASRGNNLRSI-------GLKAGCKWCLCAARWREAFEFaksqslssndtin 102
                 899****************************************************998.......********************889**********9 PP

                 ..T----B-GGGSBGGGGGTS-HHHHHHTC CS
     DUF2237  88 ..gvapkvvleathekalevvsleeLkkya 115
                    ++p+v+l+at+ kal+vv+leeL+ +a
  KHJ30081.1 103 nnPIVPRVNLNATNIKALDVVKLEELRGFA 132
                 9989**********************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       231  (0.0128842); expected 358.6 (0.02)
Passed bias filter:                      185  (0.0103185); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.43
# Mc/sec: 935.39
//
Query:       KHJ30082.1  [L=311]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2161.44
//
Query:       KHJ30083.1  [L=452]
Description: putative cyclin protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-14   52.0   0.0      1e-13   51.2   0.0    1.4  1  Cyclin_N  Cyclin, N-terminal domain
    3.5e-08   34.0   0.2      9e-08   32.6   0.0    1.8  2  Cyclin    Cyclin


Domain annotation for each model (and alignments):
>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.2   0.0   1.1e-17     1e-13      26     127 .]      95     204 ..      72     204 .. 0.86

  Alignments for each domain:
  == domain 1  score: 51.2 bits;  conditional E-value: 1.1e-17
                 S-HHHHHHHHHHHHHHHHHTT--TTHHHHHHHHHHHHHHHS.---CC...CHHHHHHHHHHHHHHHHSSS---HHHHHHHT...TT.SS-HHHHHHHHH CS
    Cyclin_N  26 lnpemRailidwlvevaekfkltpetlflavnyldRflskk.svpkd...klqlvgatcLllAaKveeisppkledlvyit...de.afteeeilemEr 116
                 ++ +  + l d++  +++k +++  tl+ +++yl+R+  +   v k    +l++++++ L+l+aK+ ++s+pk ++++ ++   ++  f+  e++ mE+
  KHJ30083.1  95 IKRKNVPPLEDFISHLVKKSNVQVPTLMSTLVYLERLRLRLpPVAKGnncTLHRIFLATLILSAKYLNDSSPKNKHWANYSnlrQNsGFELMEVNLMEM 193
                 45555566789**************************8854377776788******************************98874469*********** PP

                 HHHHHTTT--- CS
    Cyclin_N 117 liLetLnfdls 127
                 ++Le L++dl+
  KHJ30083.1 194 QLLELLDWDLR 204
                 *********95 PP

>> Cyclin  Cyclin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.0     1e-11     9e-08      60     161 .]      99     203 ..      35     203 .. 0.80
   2 ?   -2.5   0.4      0.67     6e+03      29      48 ..     346     365 ..     317     375 .. 0.58

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 1e-11
                 S--SS-HHHHHHHHHHHTT--HHHHHHHHHHHHHHHH..H-TT---STTTHHHHHHHHHHHHHHHH-SS---HHHHHHH......HTS-HHHHHHHHHH CS
      Cyclin  60 avpaisigsylsrlqkfgesaplvllgtliYldrivkrcvsealvvtsanihRllivallvatKflvDlsysnekfakv......ggislkELnkLEid 152
                 +vp+  + + +s l k ++++   l++tl+Yl+r+    +      +  ++hR+ ++ l  + K l+D+s +n+++a+        g  l E+n +E++
  KHJ30083.1  99 NVPP--LEDFISHLVKKSNVQVPTLMSTLVYLERLRL-RLPPVAKGNNCTLHRIFLATLILSAKYLNDSSPKNKHWANYsnlrqnSGFELMEVNLMEMQ 194
                 4444..567888888999999999***********99.678888999***************************99986222222567899******** PP

                 HHHHTTT-- CS
      Cyclin 153 FlflvdFdl 161
                  l l+d+dl
  KHJ30083.1 195 LLELLDWDL 203
                 ******996 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.67
                 -----T.............. CS
      Cyclin  29 ksnlensqkqssshtkttfa 48 
                 ++n+  s k+ ss+++tt +
  KHJ30083.1 346 PDNSLSSSKRNSSNNHTTGQ 365
                 34444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 3379.85
//
Query:       KHJ30084.1  [L=114]
Description: putative effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       338  (0.0188521); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.25s 00:00:00.58 Elapsed: 00:00:00.37
# Mc/sec: 931.56
//
Query:       KHJ30085.1  [L=378]
Description: putative transcriptional regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        0.2   12.2   0.3       0.43   11.1   0.3    1.6  1  zf-C2H2   Zinc finger, C2H2 type
        1.4    9.6   4.4       0.57   10.9   0.5    2.1  2  YabA      Initiation control protein YabA


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3   4.8e-05      0.43       1      21 [.     254     276 ..     254     280 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4.8e-05
                 EEET..TTTEEESSHHHHHHHHH CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHir 21 
                 ykC+  +C k + +  +L++H  
  KHJ30085.1 254 YKCGfnGCEKAYGTLNHLNAHVT 276
                 9********************86 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.5   6.3e-05      0.57      61      91 ..     238     268 ..     235     277 .. 0.88
   2 ?   -0.1   0.3      0.16   1.4e+03      31      64 ..     275     307 ..     267     315 .. 0.49

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 6.3e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        YabA  61 ekkkelsegkenLarlYeeGFHiCnvlyGsr 91 
                 +++k+ ++ +e+++r+Y+ GF  C+  yG+ 
  KHJ30085.1 238 QQHKRPRRRYEEIERMYKCGFNGCEKAYGTL 268
                 677888999********************86 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.16
                 HHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXX CS
        YabA  31 laelleenaeLeleneklrerleeeekkekekkk 64 
                 ++   +  ++   e +++r++ + ++k+e+ +++
  KHJ30085.1 275 VTMQAHGSKRTPEEFKEIRKEWKARKKEEE-NQR 307
                 444444444555566667777643333333.333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1048  (0.0584528); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.38
# Mc/sec: 2945.29
//
Query:       KHJ30086.1  [L=141]
Description: hypothetical protein EV44_g5595 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   12.2   0.0       0.12   12.2   0.0    1.1  1  IPK       Inositol polyphosphate kinase


Domain annotation for each model (and alignments):
>> IPK  Inositol polyphosphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   6.9e-06      0.12      79     143 ..      13      77 ..       2     136 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6.9e-06
                 SHHHHHHHHHHCCCSSSSCCHHHHHHHCHHHHHHHHHHHHHCSHSEEESSEEEEEEEETT..... CS
         IPK  79 skeevkealkkFlsngkslrkdakaaskllerLqelkqvlesqeslrfyssSLLfvyegdsease 143
                 +++e ++a+ +F+s+ ++  ++ + as+ ++++ + ++ l   ++l+f+ +S+ ++y+g+s++++
  KHJ30086.1  13 ERKEQENAIFDFISKRERCWEEVRNASSWAKQVSKDRHDLGIRKELNFIDGSMVMLYDGKSAKKQ 77 
                 4557789999****99988889999999********************************65544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.21s 00:00:00.57 Elapsed: 00:00:00.36
# Mc/sec: 1175.05
//
Query:       KHJ30087.1  [L=338]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        2.2    8.3  11.0        2.6    8.1   2.3    2.4  2  HypA      Hydrogenase/urease nickel incorporation, metallocha


Domain annotation for each model (and alignments):
>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   2.3   0.00014       2.6      38      96 ..     180     236 ..     173     244 .. 0.80
   2 ?    4.0   2.7    0.0027        48      69      99 ..     244     272 ..     238     278 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00014
                 T--HHHHHHHHHHHHCC.TTTT-EEEEEEE--EEEETTTS-EEECHH.H.HHS-TTTSSS- CS
        HypA  38 gvepeaLefafellaegtvlegaeLeieevpvkvrCreCgkefelee.k.alrCpkCgsad 96 
                 gv  +aL+  f+++ e+ +++    ++++++    C++C+ +   ++ + +l+C +C+s++
  KHJ30087.1 180 GVLVKALQSGFRVFDESGIAR----SFKQQQPLEFCKRCNGHHPAKNcSrSLSCSNCDSTN 236
                 566778888888888887777....6888888899*****999977764699******986 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.0027
                 -EEEETTTS-EEECHHHHHS-TTTSSS-EEE CS
        HypA  69 vkvrCreCgkefeleekalrCpkCgsadvei 99 
                   ++Cr Cg  ++ e++  rC +C+++   +
  KHJ30087.1 244 TATKCRYCGGPYQPESR--RCLACSTRAAAL 272
                 5689*****99998866..9****9887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1086  (0.0605723); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2353.10
//
Query:       KHJ30088.1  [L=99]
Description: putative u6 snrna-associated sm-like protein lsm3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-18   64.7   0.1    5.8e-18   64.3   0.1    1.2  1  LSM       LSM domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.3   0.1   3.2e-22   5.8e-18       4      67 .]      20      94 ..      17      94 .. 0.93

  Alignments for each domain:
  == domain 1  score: 64.3 bits;  conditional E-value: 3.2e-22
                HHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTET...........EEEEEEEEEEEGGGEEEEEE CS
         LSM  4 kklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkk...........ekrklglvliRGnnivlisl 67
                + ++++ v v+l+++rel+G+L+++D ++Nlv+ dveet+   +             +k ++++iRG+++vlis+
  KHJ30088.1 20 RLCLDEVVFVKLRGDRELKGRLHAYDSHCNLVMGDVEETVYVVEedeqgqdilktIHKKSEMLFIRGDSVVLISP 94
                6789************************************999999******9987778899***********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       572  (0.0319036); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 795.68
//
Query:       KHJ30089.1  [L=174]
Description: putative air1 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       672  (0.0374812); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1402.28
//
Query:       KHJ30090.1  [L=490]
Description: putative sam domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-15   57.3   0.0      2e-15   56.6   0.0    1.4  1  SAM_2           SAM domain (Sterile alpha motif)
    3.4e-15   56.2   0.1    5.7e-15   55.5   0.1    1.4  1  SAM_1           SAM domain (Sterile alpha motif)
      1e-11   45.3   0.0    1.9e-11   44.5   0.0    1.4  1  RA              Ras association (RalGDS/AF-6) domain
     0.0099   15.8   0.0      0.019   14.9   0.0    1.4  1  SAM_4           SAM domain (Sterile alpha motif)
  ------ inclusion threshold ------
      0.042   14.1   0.4       0.11   12.8   0.4    1.7  1  Plasmid_RAQPRD  Plasmid protein of unknown function (Plasmid_
       0.07   13.0   7.5       0.11   12.5   7.5    1.4  1  SPX             SPX domain


Domain annotation for each model (and alignments):
>> SAM_2  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.6   0.0   6.9e-19     2e-15       3      64 ..      68     128 ..      66     130 .. 0.95

  Alignments for each domain:
  == domain 1  score: 56.6 bits;  conditional E-value: 6.9e-19
                 GHHHHHHHHHHHHTTTGGGHHHHHHTTCSHHHHHTTSCHHHHHHTTHHHHHHHHHHHHHHHH CS
       SAM_2   3 swsledvaeWLrsiglkqytdnFrdagitgaelllrlteedLkrlGitsvghrkkilkkiqe 64 
                  w++++ a++++s+gl+qy d F++++i g e+l  l +++Lk++G+tsvghr+ ilk++ +
  KHJ30090.1  68 QWTADECADFVSSLGLHQYGDQFLENEIVG-EALVALQHDELKQMGVTSVGHRLTILKSVYD 128
                 5*****************************.***************************9865 PP

>> SAM_1  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.1   1.9e-18   5.7e-15       2      62 ..      68     128 ..      67     130 .. 0.95

  Alignments for each domain:
  == domain 1  score: 55.5 bits;  conditional E-value: 1.9e-18
                 CTTHSSHHHHHHHTTSGGGHHHHHTTTSSHHHHTTSCHHHHHHCTTTSHHHHHHHHHHHHH CS
       SAM_1   2 kwsvedVgeWLesiglgqYadlFrageidgdaLlllteddLeklgvtllGHrkkIlyaIqr 62 
                 +w+ ++ +++  s+gl+qY d+F ++ei g+aL  l++d+L+++gvt++GHr+ Il+++ +
  KHJ30090.1  68 QWTADECADFVSSLGLHQYGDQFLENEIVGEALVALQHDELKQMGVTSVGHRLTILKSVYD 128
                 69999****************************************************9865 PP

>> RA  Ras association (RalGDS/AF-6) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.0   6.3e-15   1.9e-11      17      90 ..     384     455 ..     367     458 .. 0.91

  Alignments for each domain:
  == domain 1  score: 44.5 bits;  conditional E-value: 6.3e-15
                 .EEEEEEETTSBHHHHHHHHHHHCT-GGGGCCEEEECCCTTTTEEEEE-TTSBCHHHHCCC-TTTSTCEEEEEE CS
          RA  17 tyksikvsststaqeViealLekfgledspedyvLveskerggeerkLdddecplqiqlqwkkreeslrFvLre 90 
                 ++ks +vs ++ + +V+ a+L+k++++  +e+y+L  ++++g+ er L++de+pl +++q+ k+++   F+Lr+
  KHJ30090.1 384 IFKSFRVSMDDPCYKVLPAALKKYNINAPWEQYAL--YIVYGDNERCLNMDEKPLILFKQLDKEGKKPMFMLRK 455
                 799********************************..************************************8 PP

>> SAM_4  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   6.5e-06     0.019      27      74 ..      85     133 ..      77     137 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 6.5e-06
       SAM_4  27 nyavsfvdnriqknmlldlskeimnelgitvvgdiiailkhakvv.yrq 74 
                 +y   f++n i  + l+ l+++ ++++g+t vg  ++ilk    +  rq
  KHJ30090.1  85 QYGDQFLENEIVGEALVALQHDELKQMGVTSVGHRLTILKSVYDIkVRQ 133
                 57889**********************************9865441455 PP

>> Plasmid_RAQPRD  Plasmid protein of unknown function (Plasmid_RAQPRD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.4   3.6e-05      0.11      12      50 ..     154     197 ..     146     201 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.6e-05
  Plasmid_RAQPRD  12 llkqLdqlqalveraeaqakqe.....ekaRvhfdYdrlrrDle 50 
                     ++  L++++ lve++  + ++      e  R+ f+Y+rlr+Dl 
      KHJ30090.1 154 AAATLKDIKLLVEQLHLRDERMtaaesELRRITFEYTRLREDLL 197
                     455666666666666655555532222556************95 PP

>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   7.5   3.5e-05      0.11      62     160 ..     196     368 ..     150     448 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.5e-05
         SPX  62 e..................rtepstsaaadesgnsaadasssepkdeae...........................slprrsplsrssrssssygglvs 115
                                    +t++s+s++ d+s+n +++asss+ ++                              ++ ++++l++s  s+++ ++ ++
  KHJ30090.1 196 LlpvfrmakegkplpypsaKTNGSNSSNFDNSSNISSPASSSPAIQPGIsrnystkkffidhpknlsptyahsaheRSLLEQTLDQSAASDRNLQSYSN 294
                 1444444444444666777888999999999999999888888888777**********************9999966666666666666666666666 PP

         SPX 116 sppsansssssddssesnpa.............................dssssssssesesssssspsllrrl 160
                  p+ +ns+ss +++++ +p                              + + +++++ s++ +++++   rr+
  KHJ30090.1 295 LPSISNSNSSLPSPNQLSPTsplqpcsgstlgsrsyrsdqsipsrsnfgQLDGDQNQGISQGRDNTKSAPSRRV 368
                 66555555555555555555444666665555555554444444444442222222222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3693.92
//
Query:       KHJ30091.1  [L=358]
Description: putative alternative oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-94  314.3   0.0    4.6e-94  314.0   0.0    1.1  1  AOX       Alternative oxidase


Domain annotation for each model (and alignments):
>> AOX  Alternative oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  314.0   0.0   2.6e-98   4.6e-94       5     215 .]      85     318 ..      81     318 .. 0.97

  Alignments for each domain:
  == domain 1  score: 314.0 bits;  conditional E-value: 2.6e-98
         AOX   5 eles.vklahrepktlsDkvaiglvkllRwlaDlvtre...................kkleltekkylhRaifLetvAgvpgmvaavlrhLrslrlmkr 83 
                 ++e+ +++ahr+p+++sD+va++lv+llR+++D++t++                   k ++++e+k+l R++fLe+vAgvpgmva++lrhL+slr++kr
  KHJ30091.1  85 QMETkISYAHRKPQDFSDRVALYLVRLLRFCTDFATGYkhdvdppkaicdgeavvasKPYKMSERKWLIRFVFLESVAGVPGMVAGMLRHLHSLRRLKR 183
                 55533899******************************************************************************************* PP

         AOX  84 dkgwirtlleeaenermHllvllklaeptlleRllvllaqgvffniflllYllsPrvahrlvgyleEeavvtYtqliedideGkleewek..vkaPeiA 180
                 d+gwi+tlleea+nermHll++lk++ep++++R+++++aqgvffn ++l+Yl+sP ++hr+vgyleEeav+tYt +i+di++Gkl++w++  +++P+iA
  KHJ30091.1 184 DNGWIETLLEEAYNERMHLLTFLKMSEPGWFMRMMIIGAQGVFFNSMFLSYLISPSTCHRFVGYLEEEAVLTYTLAIQDIEAGKLPNWSNpnFRIPDIA 282
                 ****************************************************************************************986699***** PP

         AOX 181 lqYwkl.qeeatlrdvilliRaDEakhrdvnhtlan 215
                 ++Ywk+ + ++++r++++++RaDEakhr+vnhtl+n
  KHJ30091.1 283 VNYWKIpEGHRNMRNLLMYVRADEAKHREVNHTLGN 318
                 ******8889***********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       292  (0.0162865); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2658.85
//
Query:       KHJ30092.1  [L=171]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       423  (0.0235931); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1349.15
//
Query:       KHJ30093.1  [L=749]
Description: hypothetical protein EV44_g0228 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.035   14.4   0.1      0.035   14.4   0.1    2.0  2  DUF3082     Protein of unknown function (DUF3082)
      0.081   13.3   0.0       0.23   11.8   0.0    1.8  2  U3snoRNP10  U3 small nucleolar RNA-associated protein 10
       0.13   11.3   0.0       0.18   10.8   0.0    1.1  1  Ric8        Guanine nucleotide exchange factor synembryn


Domain annotation for each model (and alignments):
>> DUF3082  Protein of unknown function (DUF3082)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.5      0.86   5.2e+03      54      69 ..       7      22 ..       5      23 .. 0.85
   2 ?   14.4   0.1   5.8e-06     0.035      18      64 ..     216     262 ..     213     266 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.86
     DUF3082 54 vvGlcyLatfvfgiva 69
                ++G+++L + vf +v+
  KHJ30093.1  7 LLGISVLLSLVFFLVS 22
                68999*******9987 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 5.8e-06
     DUF3082  18 vvlyklttsiaatfarkplssdnqlvqriavavRtlvvGlcyLatfv 64 
                 + ly l   i +tf+++p +s + + + i+++v tlv+  ++ +t++
  KHJ30093.1 216 LSLYGLIPEIVHTFTSQPNPSAQAACAMIGAVVNTLVNVGVTAVTGM 262
                 57999********************************9777777765 PP

>> U3snoRNP10  U3 small nucleolar RNA-associated protein 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.9e-05      0.23       4      54 ..     220     270 ..     217     326 .. 0.87
   2 ?   -3.4   0.0         2   1.2e+04      36      56 ..     495     515 ..     489     520 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.9e-05
                 HHHHHHHHHHT-TT-HHHHHHHHHHHHHHHHTT-S-HHHHHHHHHHHHHH- CS
  U3snoRNP10   4 allpvllegLlssssadlqaaaymilsvLaskvpLsdkvleallesilknl 54 
                  l+p +++ + s++++ +qaa+ mi +v+ + v+   ++++ ++ s+++++
  KHJ30093.1 220 GLIPEIVHTFTSQPNPSAQAACAMIGAVVNTLVNVGVTAVTGMMSSTVTSF 270
                 589********999********************************99984 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2
                 T-S-HHHHHHHHHHHHHH--G CS
  U3snoRNP10  36 vpLsdkvleallesilknlsk 56 
                  p++ ++++a++  i++++s+
  KHJ30093.1 495 GPMKREIMRAFTLNIASQISA 515
                 589999999999999998764 PP

>> Ric8  Guanine nucleotide exchange factor synembryn
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0     3e-05      0.18     186     238 ..     212     264 ..     164     334 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 3e-05
        Ric8 186 eelseklarllppllrlllllpipspdpLkpplthlinaLlnlpleeskkeaa 238
                 +e++ +l++l+p+++++++ +p ps +   ++++ ++n+L+n+ ++ ++  + 
  KHJ30093.1 212 DEMNLSLYGLIPEIVHTFTSQPNPSAQAACAMIGAVVNTLVNVGVTAVTGMMS 264
                 3566789********************8899*************977766433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (749 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       517  (0.028836); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 5092.11
//
Query:       KHJ30094.1  [L=132]
Description: hypothetical protein EV44_g3126 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1103  (0.0615204); expected 358.6 (0.02)
Passed bias filter:                      580  (0.0323498); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 981.82
//
Query:       KHJ30095.1  [L=1419]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.9e-56  189.9   0.9    8.5e-56  189.2   0.9    1.3  1  SNF2_N        SNF2 family N-terminal domain
    2.6e-09   36.7   9.1    6.9e-09   35.4   9.1    1.8  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    8.8e-09   35.1   8.3    2.8e-08   33.5   8.3    1.9  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    7.5e-08   32.1  10.4    2.2e-07   30.6  10.4    1.9  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    1.5e-07   31.2   7.7    3.3e-07   30.1   7.7    1.6  1  Prok-RING_4   Prokaryotic RING finger family 4
    1.1e-06   29.0   1.1    7.5e-06   26.3   0.0    3.0  3  Helicase_C    Helicase conserved C-terminal domain
    1.5e-06   28.4  11.4    1.5e-06   28.4  11.4    2.3  2  zf-RING_2     Ring finger domain
    1.3e-05   25.1   5.3    1.9e-05   24.6   3.7    2.1  1  zf-RING_UBOX  RING-type zinc-finger
    6.1e-05   23.2   8.1    0.00024   21.3   8.1    2.1  1  zf-rbx1       RING-H2 zinc finger domain
     0.0003   20.7   9.2    0.00087   19.2   9.2    1.9  1  zf-RING_5     zinc-RING finger domain
  ------ inclusion threshold ------
      0.017   15.1   0.0      0.059   13.4   0.0    2.0  1  ResIII        Type III restriction enzyme, res subunit
      0.042   14.0   9.2      0.093   12.9   9.2    1.6  1  zf-C3HC4_4    zinc finger of C3HC4-type, RING
       0.23   11.4   2.7       0.55   10.1   2.7    1.6  1  zf-RING_6     zf-RING of BARD1-type protein
        1.7    8.6   5.5        1.6    8.7   0.2    3.0  2  DUF1759       Protein of unknown function (DUF1759)
        2.2    8.2   8.7         10    6.0   8.7    2.2  1  zf-RING_4     RING/Ubox like zinc-binding domain


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.2   0.9   7.1e-59   8.5e-56       1     348 [.     243     619 ..     243     620 .. 0.84

  Alignments for each domain:
  == domain 1  score: 189.2 bits;  conditional E-value: 7.1e-59
                 HHHHHHHHH........................................................HHHHHTT--EEE---TTS--HHHHHHHHH...HH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N   1 yQkeavkwmlkReqnlqdleaalrkllk..............tldgekiyvnpatgev...veesaeakqsvrGGiLaDemGLGKTvqvlalilaqrak 82 
                 +Qk+av+w+l+Re  +  +   l+++ +                 g+k yv    g+    +++ +  ++ v+GGiL++emGLGKT+++++li+ ++  
  KHJ30095.1 243 FQKRAVQWLLRREGVEWANG-SLQNFTHktitnelgsfiestDFVGQKFYVSHLFGIAtfdIKPFIASERRVKGGILSEEMGLGKTIEMISLIALHNLS 340
                 6********99998877554.66666667999********9877788888887655442226778889999***********************66554 PP

                 TTTS---.............S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH-----------------EEEE-HHHHHHHT........... CS
                 xxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........ RF
      SNF2_N  83 eekdkek......krkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydvvittYdvlsreaelq........ 167
                 + + +         +  +   +tLi+ P  +l+qW +e+++h++  +++ + +++    +k   + + + la+ d+vittY+vl+ e ++         
  KHJ30095.1 341 KSSSR-IvfdsllDTFIRSTSATLIITPPPILHQWITEVKQHAPLLKITLYEGMKT--HQKTDFFELINELAKSDIVITTYSVLAAEIHFTqlnpekel 436
                 44444.2599998888888999************************9977666664..577778899999***************999988******** PP

                 ..........TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--.HHHHHHHTHHHHHHHHHHHHH CS
                 .......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 168 .......kkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfge.kqtfdkllqrpieaqaekgrs 258
                          +s+l+ ++w+r v+DE++ ++++ s+aa +++ +   n w+++GTP++ + +dl gLl fL+ ep+ + k++++ l+++  +        
  KHJ30095.1 437 rhqpkyqRPKSPLMMLHWWRCVIDEAQLVESGFSNAAIVARMIPRVNAWCISGTPVKKDINDLRGLLIFLKYEPYASaKHVWKALVTTHKH-------- 527
                 *****988899******************************************************************999*****999888........ PP

                 HHHTT-STTEE---GGGT..--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH-.HHHHHHHHHHHHH--- CS
                 xxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx RF
      SNF2_N 259 rLlqllqrlmlrrakkdv..eknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskskek.ilelllelrqacnhpq 348
                 +  +++++l +r++k+ +  e  lP +   +i ++++ ve++ Y +l + +++++ + +  r   +  + + +  + +   l +lrq++ hpq
  KHJ30095.1 528 EFSKIIRKLAIRHSKRSIrdELHLPIQRRFVITMSFTLVEEQNYLELFKEMCNEVGLDTEGRPLNKGWKIE-NYCEiMRRWLCRLRQTVLHPQ 619
                 999***************98899**********************99998888877766655322222111.122223345667777777776 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   9.1   5.8e-12   6.9e-09       2      40 .]    1106    1143 ..    1105    1143 .. 0.98

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 5.8e-12
  zf-C3HC4_2    2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLeekneCPlC 40  
                  C iC + ++ + ++t CgH+fC++Ci  +++++ +CP+C
  KHJ30095.1 1106 CVICKEKINIG-TLTVCGHQFCKECISLWWSSHRNCPVC 1143
                  *********99.*************************** PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   8.3   2.3e-11   2.8e-08       2      48 ..    1103    1148 ..    1102    1150 .. 0.94

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 2.3e-11
                  GSB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B-- CS
  zf-C3HC4_3    2 deeCviClerprnvvllpCgHlvlCeeCaekllkrkkkCpiCrrpie 48  
                  +++CviC+e+    +l  CgH+ +C+eC + +++++++Cp+C+r+  
  KHJ30095.1 1103 QKICVICKEKINIGTLTVCGHQ-FCKECISLWWSSHRNCPVCKRKLA 1148
                  789*******************.********************9875 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6  10.4   1.8e-10   2.2e-07       1      41 []    1106    1143 ..    1106    1143 .. 0.98

  Alignments for each domain:
  == domain 1  score: 30.6 bits;  conditional E-value: 1.8e-10
                  -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4    1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41  
                  C iC+e++ + + l+ C+H+fC++Ci+ +++  ++++CP+C
  KHJ30095.1 1106 CVICKEKINIGT-LTVCGHQFCKECISLWWS--SHRNCPVC 1143
                  9***********.******************..8899**** PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   7.7   2.8e-10   3.3e-07       1      46 []    1106    1153 ..    1106    1153 .. 0.93

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 2.8e-10
  Prok-RING_4    1 CvlCgeqekkailepCgHlvCkeCfdskdls..sCPlCqrrisksdpf 46  
                   Cv+C+e+ +   l  CgH +CkeC + + +s   CP+C+r+++++d f
   KHJ30095.1 1106 CVICKEKINIGTLTVCGHQFCKECISLWWSShrNCPVCKRKLAQADLF 1153
                   ****************************77777*********998876 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       6.2   7.4e+03      43      73 ..     387     417 ..     371     427 .. 0.74
   2 !   26.3   0.0   6.3e-09   7.5e-06       9     111 .]    1220    1320 ..    1212    1320 .. 0.83
   3 ?   -1.4   0.1       2.4   2.9e+03      27      73 ..    1347    1394 ..    1329    1398 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 6.2
                 EEEESTTSTHHHHHHHHHHHH.TTSSSEEEES CS
  Helicase_C  43 vavlhgelpqnereeileqfn.kgesdvLiat 73 
                 ++ l+  +++ ++ + +e  n   +sd++i+t
  KHJ30095.1 387 IT-LYEGMKTHQKTDFFELINeLAKSDIVITT 417
                 44.44559999999999999953677888887 PP

  == domain 2  score: 26.3 bits;  conditional E-value: 6.3e-09
                  HH...HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSHHHH CS
  Helicase_C    9 ll...kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlprnvtsy 100 
                   l     +  g k++if+++++ l+ +++ le++  ++       ++ +r   +e+f+ + ++  +L+  ++ + G+++ ++++Vi +++  n++  
  KHJ30095.1 1220 HLiwlRYSDPGAKTIIFSQFKEFLHALTVALEQF--RI-----GYSSIDRANGIEKFKcDPSIEcFLLHARAHSSGLNLINASHVILCEPSINTALE 1309
                  444446678999**********996555555555..44.....356788999******9888999******************************** PP

                  HHHHTTSSSTT CS
  Helicase_C  101 iqriGRtgRag 111 
                   q+i R+ R+g
  KHJ30095.1 1310 LQAIARVDRIG 1320
                  *******9986 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 2.4
                  HHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEES CS
  Helicase_C   27 drlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiat 73  
                  +r+e   k +l k++ +++ ++ ++++n  e+   q n+  ++ L+a 
  KHJ30095.1 1347 RRMEYlDKKILAKSNSQYTDMDMDIEKNIEEANSMQLNQTYYKKLLAK 1394
                  344333244456778999999999999999999999998888877775 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.3       7.5   8.9e+03      14      23 ..     218     227 ..     212     228 .. 0.57
   2 !   28.4  11.4   1.3e-09   1.5e-06       2      44 .]    1105    1144 ..    1104    1144 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 7.5
   zf-RING_2  14 dsvlllpCgH 23 
                  + + ++C+H
  KHJ30095.1 218 VHSPPKDCCH 227
                 4444456*99 PP

  == domain 2  score: 28.4 bits;  conditional E-value: 1.3e-09
   zf-RING_2    2 eCpICleelssadsvlllpCgHvfhreClerwlrssstCPlCr 44  
                   C+IC e+++ +  ++   CgH f++eC++ w  s+++CP+C+
  KHJ30095.1 1105 ICVICKEKINIGTLTV---CGHQFCKECISLWWSSHRNCPVCK 1144
                  5****99997655555...***********************7 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   3.7   1.6e-08   1.9e-05       1      39 []    1106    1141 ..    1106    1141 .. 0.81

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 1.6e-08
  zf-RING_UBOX    1 CpIClelftdPlvlpCGHtFCreClwelskslegafkCP 39  
                    C IC+e  +  +++ CGH FC+eC+   s + + ++ CP
    KHJ30095.1 1106 CVICKEKINIGTLTVCGHQFCKECI---SLWWSSHRNCP 1141
                    99******7443334**********...78888888888 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   8.1     2e-07   0.00024      13      55 .]    1105    1144 ..    1094    1144 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 2e-07
     zf-rbx1   13 acieckapgdeecpvvlGeCgHaFHlhCiskWlktrkvCPlcr 55  
                   c+ ck++ +     +l  CgH+F ++Cis W +++++CP+c+
  KHJ30095.1 1105 ICVICKEKINI-G--TLTVCGHQFCKECISLWWSSHRNCPVCK 1144
                  46666666555.3..3456***********************6 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   9.2   7.3e-07   0.00087       2      43 ..    1106    1144 ..    1105    1145 .. 0.94

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 7.3e-07
   zf-RING_5    2 CnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCr 43  
                  C +C ek+       lt CgH fC++C++    + ++Cp+C+
  KHJ30095.1 1106 CVICKEKI---NIGTLTVCGHQFCKECISLWWSSHRNCPVCK 1144
                  99999999...899***************99999*******9 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   4.9e-05     0.059      21     124 ..     303     436 ..     237     469 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.9e-05
                 .........TTSEEEEEESTTSTHHHHHHHHHHHH-S....................-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--. CS
      ResIII  21 s.......krdkrglikmaTGtGKTlvaaklierllkkgkee...............kflflvprkslleqtleefkkflseaykeigkkvsgdkkka. 96 
                 +       +r k g++  + G GKT+ +++li+    +++ +                + +++    +l q+++e+k+ ++  +    + ++g k ++ 
  KHJ30095.1 303 IkpfiaseRRVKGGILSEEMGLGKTIEMISLIALHNLSKSSSrivfdslldtfirstSATLIITPPPILHQWITEVKQHAPLLKI---TLYEGMKTHQk 398
                 05555555677899999************999988887776689*************6666667788999*********998753...44444443333 PP

                 ............-SEEEEEHHHHHHTH........... CS
      ResIII  97 .....kekdstnkkilvttiqsldadseee.....eee 124
                        ++  +++i++tt++ l a+++ +     +e 
  KHJ30095.1 399 tdffeLINELAKSDIVITTYSVLAAEIHFTqlnpeKEL 436
                 34467667888999*********999966655554222 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   9.2   7.8e-05     0.093       1      42 []    1106    1143 ..    1106    1143 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 7.8e-05
  zf-C3HC4_4    1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42  
                  C iC + ++  +   CGh+fC +Cis ++ +       Cp+C
  KHJ30095.1 1106 CVICKEKINIGTLTVCGHQFCKECISLWWSSHR----NCPVC 1143
                  677777777777788**************9884....49999 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.7   0.00046      0.55      22      47 ..    1117    1144 ..    1104    1152 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00046
   zf-RING_6   22 clggcehifcsncisdcfgs..gcpvcy 47  
                   l  c h fc +cis  + s   cpvc 
  KHJ30095.1 1117 TLTVCGHQFCKECISLWWSShrNCPVCK 1144
                  4567************9998556****6 PP

>> DUF1759  Protein of unknown function (DUF1759)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.2    0.0013       1.6      87     133 ..     839     885 ..     784     900 .. 0.88
   2 ?    0.5   1.0      0.45   5.4e+02      76     133 ..    1018    1071 ..     968    1087 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0013
     DUF1759  87 lkeedasqlrrivdavneivralealgeeadkydailvsllleKlde 133
                  + +++++l++i   ++e+ +al++ ++  +++  i++  ll+ l +
  KHJ30095.1 839 GNLKNTKELKHIDKSLDELAKALDSQAVVIKDWREIIIETLLRSLVD 885
                 46899************************************998755 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.45
     DUF1759   76 ellnelmklpslkeedasqlrrivdavneivralealgeeadkydailvsllleKlde 133 
                   +l+ ++ l    e++ +    ++++  e  r+l+++++++  yd ++    l K+ +
  KHJ30095.1 1018 IHLKVMVAL----EKELELFTIVMNTRVEYYRQLQQISDMVTVYDGPIDEKTLAKMLH 1071
                  333333333....44677777788999999************9*99998888888744 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   8.7    0.0084        10      20      46 ..    1121    1146 ..    1106    1148 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0084
   zf-RING_4   20 CgyqiClfCyhrileeeegrCPaCree 46  
                  Cg+q+C  C +    +++  CP C+++
  KHJ30095.1 1121 CGHQFCKECISLWW-SSHRNCPVCKRK 1146
                  *********87555.78********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1419 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       868  (0.0484132); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.84u 0.26s 00:00:01.10 Elapsed: 00:00:00.45
# Mc/sec: 9375.34
//
Query:       KHJ30096.1  [L=702]
Description: putative ino80 chromatin remodeling complex ies1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (702 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       879  (0.0490267); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 4477.92
//
Query:       KHJ30097.1  [L=208]
Description: putative igr protein domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-23   82.4   0.5    1.8e-23   82.4   0.5    1.9  2  IGR       IGR protein motif


Domain annotation for each model (and alignments):
>> IGR  IGR protein motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.4   0.5     1e-27   1.8e-23       1      55 []      21      76 ..      21      76 .. 0.99
   2 ?   -3.4   0.8       0.6   1.1e+04      29      43 ..     186     200 ..     183     200 .. 0.76

  Alignments for each domain:
  == domain 1  score: 82.4 bits;  conditional E-value: 1e-27
         IGR  1 etFLkkIGRnceehaekfeswekLfelsskqlkelGi.pvrqRRYiLrwrekyrqG 55
                +tFL++IGRn+ eha+kf  w +Lf+l s++lk lGi p+r+RRY+L wre+yrqG
  KHJ30097.1 21 NTFLTLIGRNMIEHASKFSGWASLFRLESSELKRLGIePPRSRRYLLLWRERYRQG 76
                59*****************************************************9 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.6
         IGR  29 skqlkelGipvrqRR 43 
                 + + +++ + ++ RR
  KHJ30097.1 186 GGERRQAEVRAKRRR 200
                 567788889999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1602.64
//
Query:       KHJ30098.1  [L=405]
Description: putative carboxylesterase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.8e-20   71.2   0.0    2.4e-19   69.6   0.0    1.7  1  COesterase     Carboxylesterase family
  ------ inclusion threshold ------
      0.014   15.2   0.0      0.021   14.7   0.0    1.3  1  Abhydrolase_3  alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> COesterase  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.6   0.0   2.7e-23   2.4e-19     164     342 ..       1     227 [.       1     283 [. 0.78

  Alignments for each domain:
  == domain 1  score: 69.6 bits;  conditional E-value: 2.7e-23
                 HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSGGGTT................SBSEEEEES--TTSTTTSBSH....HHHHHHHHHHH CS
  COesterase 164 lDqvlALrWVkenIasFGGdpervtlfGesAGaasvsllllsplsrg................lfkraIlqSGsalspwaiqkk....arkrakklakk 242
                 +Dq++A+ WV+++I++FGGd++rvtl+Ge+AGa+s+  +l+ p   +                 f++a+lqS   ++p+ ++++    ++    ++a++
  KHJ30098.1   1 MDQRMAFSWVQKHIKKFGGDKSRVTLVGEGAGASSILHHLTAPNITNrffpmiqskshhhrkfPFRSAVLQSP-KYQPIITSQSdiifEKACRPRIATI 98 
                 7*****************************************988877************************7.7788888877798655556688888 PP

                 TTS................-CSSHH........HHHHHHHCS-HHHHHHCCGGSSSSSSTTC-SSS-B--S......SSSSS-HHHHHHCGC...CSEE CS
  COesterase 243 vgc................kasssk........elveclrsksaeelldaqekaleasssklvsfaPvvdg......dflpekPeellkseg...kvpl 308
                   +                     +        + +  lr  ++e l++ +   +++ss   ++f+P vd       +++p+ P++ l++ +    v +
  KHJ30098.1  99 HSFsphlilqsayivkvltV----TtaiwghkvKNIAKLRLLPYEVLYAVNAALIQESSYGTFTFGPAVDYqkgidnSYVPDFPLRRLAKGKmakGVHI 193
                 88888877777666655430....1345566567888899999999999999999**************9988888899***********77**9**** PP

                 EEEEETTTTHHHHCCHSTTTSSSSHHHHHHHHHH CS
  COesterase 309 liGvnkdegllflaylldkeksvkkkeeklsesl 342
                 +iG  ++e +++   ++ k++ +k+   ++  ++
  KHJ30098.1 194 IIGQKRNENSFLFPSTVLKDDGLKDHLARIFPTV 227
                 ************9999988777666655554443 PP

>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   2.4e-06     0.021      51      83 ..       2      34 ..       1      77 [. 0.87

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 2.4e-06
                   HHHHHHHHHHHTHHHHTETTCEEEEEEETHHHH CS
  Abhydrolase_3 51 dalaalrwlaeqawelgadpsrivlaGdSaGGn 83
                   d   a++w++++ +++g d+sr++l+G+ aG+ 
     KHJ30098.1  2 DQRMAFSWVQKHIKKFGGDKSRVTLVGEGAGAS 34
                   667799******99*****************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 3050.91
//
Query:       KHJ30099.1  [L=705]
Description: putative origin recognition complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-41  142.0   0.1    4.1e-39  134.6   0.1    2.2  1  ORC3_N    Origin recognition complex (ORC) subunit 3 N-termin
    1.4e-24   86.7   0.2    1.6e-13   50.9   0.0    2.5  2  ORC_WH_C  Origin recognition complex winged helix C-terminal


Domain annotation for each model (and alignments):
>> ORC3_N  Origin recognition complex (ORC) subunit 3 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.6   0.1   4.6e-43   4.1e-39      21     332 .]      63     340 ..      41     340 .. 0.88

  Alignments for each domain:
  == domain 1  score: 134.6 bits;  conditional E-value: 4.6e-43
                 XX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-..........-----S--EEEEEBTT-GGGCHHHHHHHHHHHHHTTS-EEEEE CS
      ORC3_N  21 eksearfkayqrlWeqikseverlqeelnkkaldslveFvrkqaaervekadetesklesseiptaalllGvNvddheetFesLtesLrksvtplvvlL 119
                   ++ r +  +++W+++++++ ++++ +n+ + d++ +Fv+ + a+           l+ ++ipt+ +++G N+   e+ F++++ +L++++   v+lL
  KHJ30099.1  63 YFKKLRQELFNQAWAATDARIREVLDSANRYVSDEISNFVQATRAK-----------LDGQQIPTGFVITGPNISSQELLFRQISCRLKNDTCGPVALL 150
                 445889999********************************99988...........889*******************************999***** PP

                 -CCC-SSCHHHHHHHHHHHHHCCH-------------------GGG--HHHHHHHHHHHGS.SSHHHHHTTTT-TSS-SS.--EEEEES-STTS-HHHH CS
      ORC3_N 120 qsrdckalkvalekllsqLmekeeeeeedeaeevsesdakslrksqkslraLkrWYeevtrktserarskkraakaekiqskpvVvileDlEsfdakVL 218
                 +s d+++lk++l++l++  + ++ e+ e+ ++ + e   +  +  +++l+          ++++      kr+      +   + vi++D E++da+ +
  KHJ30099.1 151 RSTDVSSLKSILKQLIRDVLRQAYEKYEEYSSLEFE---NGRKLLNYDLKI--------IHNFA------KRH------KDAVITVIFQDSEAYDASLI 226
                 *******************97654444444442222...233344444442........22221......111......23569*************** PP

                 HHHHHHHHHTCTTC-EEEEEEESS-HHHHHHHS-HHHHCCTTEEEEEB--HHHHHHHHHHHTTT-TTSS-EE-HHHHHHHHHHHHCT---HHHHHHHHH CS
      ORC3_N 219 qdfililseyvselPlvlvlGvATSvsaihgllPaavssklavelFqslsakshlaavldkvlLtpefpfkLsgkvlqvLldiFlehdfSvsafikalk 317
                  + i+ ls+  +++P+++++GvATSv+   + +P+a s  ++ ++F ++  +s l+ ++ +v+  +++p++L+++ +  L++  + +   ++af+ alk
  KHJ30099.1 227 AETIILLSSWRDRIPFTFIFGVATSVDLFDERIPRAASRCISGHQFEAEQTNSLLQRIFSRVIAGADVPLRLGPELITALMELQKNYAQGIQAFLTALK 325
                 *************************************************************************************************** PP

                 HHHHHHHTT-GGGGG CS
      ORC3_N 318 lallehFmtqplsvL 332
                 +a++ h++   lsvL
  KHJ30099.1 326 FAYMCHYYLDALSVL 340
                 ************998 PP

>> ORC_WH_C  Origin recognition complex winged helix C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.9   0.0   1.8e-17   1.6e-13       1      67 [.     603     662 ..     603     667 .. 0.90
   2 !   35.6   0.1   9.8e-13   8.8e-09      97     140 .]     659     702 ..     657     702 .. 0.95

  Alignments for each domain:
  == domain 1  score: 50.9 bits;  conditional E-value: 1.8e-17
    ORC_WH_C   1 RaaiesaLaepedylrcaleeeeeeeeslaslpdtsilyklyleagrliNvyDwyeaFkqvlekere 67 
                 Ra+ie aL++p++yl++ ++       ++++ p tsily++yle+g+liNvyD++++F++v++++ +
  KHJ30099.1 603 RATIELALSKPSSYLNSCTS-------NSTKPPATSILYQMYLESGSLINVYDLWNSFASVFNASTD 662
                 99*************98776.......45799******************************98765 PP

  == domain 2  score: 35.6 bits;  conditional E-value: 9.8e-13
    ORC_WH_C  97 deedeeewekelqarFiralheLellGliketgrkadhvaklvw 140
                 +++d+   e+++++ F+r l++L++lG+ik+++rk dh++kl w
  KHJ30099.1 659 ASTDDTVDERDILVSFYRGLADLKMLGMIKQSRRKVDHLSKLLW 702
                 56789999**********************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (705 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 4845.84
//
Query:       KHJ30100.1  [L=932]
Description: putative pentatricopeptide repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-06   26.5   3.8          1    9.6   0.0    6.1  8  PPR_2     PPR repeat family
    1.2e-05   25.3   0.0       0.96    9.6   0.0    4.4  4  PPR_3     Pentatricopeptide repeat domain
     0.0014   18.7   1.7        7.4    7.1   0.0    5.4  5  PPR       PPR repeat


Domain annotation for each model (and alignments):
>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.66     4e+03      11      25 ..     398     412 ..     397     414 .. 0.84
   2 ?   -2.3   0.0      0.88   5.3e+03       9      27 ..     432     453 ..     431     458 .. 0.76
   3 !    9.6   0.0   0.00017         1       6      29 ..     468     491 ..     467     496 .. 0.94
   4 !    6.8   0.0    0.0013       7.6      11      38 ..     553     580 ..     548     591 .. 0.86
   5 ?   -1.6   0.0      0.56   3.3e+03       5      38 ..     654     687 ..     651     694 .. 0.77
   6 !    4.2   0.0    0.0083        50      15      41 ..     699     725 ..     685     731 .. 0.84
   7 ?   -3.5   0.0       2.1   1.3e+04      25      33 ..     757     765 ..     753     766 .. 0.86
   8 ?   -1.1   0.0      0.37   2.2e+03      15      31 ..     845     861 ..     841     864 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.66
       PPR_2  11 sglckkgkveeAfkl 25 
                  ++++ g++++Af++
  KHJ30100.1 398 RMFAQLGQLDKAFEI 412
                 578899*******86 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.88
       PPR_2   9 lIsglc...kkgkveeAfklfn 27 
                 lI++++   k++ ++ A+ l+ 
  KHJ30100.1 432 LIKACLiskKDRSIQRAWALYL 453
                 677777776788899***9996 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.00017
       PPR_2   6 yNtlIsglckkgkveeAfklfneM 29 
                 y +lIs+++ ++++e A+ +f +M
  KHJ30100.1 468 YDVLISWFMDAKEPELALAIFRDM 491
                 779********************* PP

  == domain 4  score: 6.8 bits;  conditional E-value: 0.0013
       PPR_2  11 sglckkgkveeAfklfneMkkrglePns 38 
                 + l  + ++++A k+ + M+++g++P++
  KHJ30100.1 553 KKLIGDDELNSAKKVIDLMQDHGITPSP 580
                 556678899*****************97 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 0.56
       PPR_2   5 tyNtlIsglckkgkveeAfklfneMkkrglePns 38 
                 t+  l + + ++ k e+   lf+  ++  ++Pn+
  KHJ30100.1 654 TFSLLVQQYRQRQKKESLSALFDAFVRSRIPPNT 687
                 6666666677777777778899999999999997 PP

  == domain 6  score: 4.2 bits;  conditional E-value: 0.0083
       PPR_2  15 kkgkveeAfklfneMkkrglePnsyTy 41 
                 ++ k + Af+ +     rg++P+  T+
  KHJ30100.1 699 RNHKTSLAFETYRCLTARGVKPDYETF 725
                 7889999****************9998 PP

  == domain 7  score: -3.5 bits;  conditional E-value: 2.1
       PPR_2  25 lfneMkkrg 33 
                 lf eM kr+
  KHJ30100.1 757 LFAEMIKRK 765
                 89***9985 PP

  == domain 8  score: -1.1 bits;  conditional E-value: 0.37
       PPR_2  15 kkgkveeAfklfneMkk 31 
                 +k ++ + ++lf++M++
  KHJ30100.1 845 TKDRIGSVMQLFQKMRN 861
                 677888999******97 PP

>> PPR_3  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0     0.001       6.1      12      41 ..     462     491 ..     454     495 .. 0.88
   2 !    9.6   0.0   0.00016      0.96      32      59 ..     562     589 ..     554     593 .. 0.90
   3 ?    2.5   0.0     0.026   1.6e+02      16      57 ..     653     694 ..     650     700 .. 0.90
   4 ?    0.4   0.0      0.12   7.1e+02       7      55 ..     679     727 ..     673     734 .. 0.69

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.001
       PPR_3  12 kldvvtYthLLtayanagnkklalevlerm 41 
                 k+ +++Y  L++ ++ a++ +lal ++  m
  KHJ30100.1 462 KIVMNDYDVLISWFMDAKEPELALAIFRDM 491
                 66689**********************998 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00016
       PPR_3  32 klalevlermkkkgikPtvvtyNailgv 59 
                 + a +v++ m+  gi+P+ ++ N ++g+
  KHJ30100.1 562 NSAKKVIDLMQDHGITPSPMYMNGLIGA 589
                 6799**********************98 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.026
       PPR_3  16 vtYthLLtayanagnkklalevlermkkkgikPtvvtyNail 57 
                  t+  L + y + ++k+ ++  ++     +i P+  + N ++
  KHJ30100.1 653 ETFSLLVQQYRQRQKKESLSALFDAFVRSRIPPNTKYLNQVI 694
                 67888999999************************9999876 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.12
       PPR_3   7 erkgikldvvtYthLLtayanagnkklalevlermkkkgikPtvvtyNa 55 
                 +r  i ++    +  +    ++ +  la+e+   +   g+kP   t+  
  KHJ30100.1 679 VRSRIPPNTKYLNQVILTDTRNHKTSLAFETYRCLTARGVKPDYETFIL 727
                 5555556666666666666788888899999999999999998888755 PP

>> PPR  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.033   1.9e+02       8      22 ..     398     412 ..     397     413 .. 0.89
   2 !    7.1   0.0    0.0012       7.4       3      27 ..     468     492 ..     468     495 .. 0.93
   3 ?    2.1   0.0     0.048   2.9e+02       5      31 .]     550     576 ..     547     576 .. 0.80
   4 ?   -1.7   0.0      0.75   4.5e+03      18      29 ..     753     764 ..     747     765 .. 0.76
   5 ?   -0.3   0.0      0.27   1.6e+03      17      28 ..     850     861 ..     846     863 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.033
         PPR   8 sgycknGkleeAlel 22 
                 + +++ G+l++A+e+
  KHJ30100.1 398 RMFAQLGQLDKAFEI 412
                 689*********996 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0012
         PPR   3 ynslIsgycknGkleeAlelfkeMk 27 
                 y +lIs +  + ++e Al +f++M 
  KHJ30100.1 468 YDVLISWFMDAKEPELALAIFRDMM 492
                 778*********************6 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.048
         PPR   5 slIsgycknGkleeAlelfkeMkekGi 31 
                 s+I+ +    +l  A+++++ M+++Gi
  KHJ30100.1 550 SWIKKLIGDDELNSAKKVIDLMQDHGI 576
                 55666666778899**********997 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 0.75
         PPR  18 eAlelfkeMkek 29 
                  +  lf eM+++
  KHJ30100.1 753 TCRLLFAEMIKR 764
                 56779****997 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 0.27
         PPR  17 eeAlelfkeMke 28 
                   +++lf++M+ 
  KHJ30100.1 850 GSVMQLFQKMRN 861
                 56899*****86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (932 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       602  (0.0335769); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.31s 00:00:01.01 Elapsed: 00:00:00.48
# Mc/sec: 5872.88
//
Query:       KHJ30101.1  [L=287]
Description: hypothetical protein EV44_g5053 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.33   11.0   2.1       0.56   10.2   2.1    1.3  1  DUF1656   Protein of unknown function (DUF1656)


Domain annotation for each model (and alignments):
>> DUF1656  Protein of unknown function (DUF1656)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.1   3.1e-05      0.56      31      47 ..      66      82 ..      65      83 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 3.1e-05
     DUF1656 31 arlglyrlvWhpaLfdl 47
                +r +l+r+ Wh+ Lf++
  KHJ30101.1 66 HRARLSRYPWHRRLFRA 82
                699************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2214.70
//
Query:       KHJ30102.1  [L=282]
Description: hypothetical protein EV44_g0512 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.02   14.4   0.3      0.034   13.7   0.3    1.3  1  CEBP1_N   Cytoplasmic polyadenylation element-binding protein


Domain annotation for each model (and alignments):
>> CEBP1_N  Cytoplasmic polyadenylation element-binding protein 1 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.3   1.9e-06     0.034     173     213 ..      26      66 ..      10      76 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.9e-06
     CEBP1_N 173 rslldsrsssPedsetsgfssGsdhlsdllsslrispplPf 213
                 + l+ s +s P  se s+fss s ++s+++++ ++s p P 
  KHJ30102.1  26 QELFYSSTSLPIQSEESSFSSVSKYISEFITTHKLSIPQPN 66 
                 6788899999**************************99885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2095.83
//
Query:       KHJ30103.1  [L=492]
Description: putative cyclopropane-fatty-acyl-phospholipid synthase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-50  172.2   0.1    2.2e-50  171.6   0.1    1.3  1  DUF1365   Protein of unknown function (DUF1365)


Domain annotation for each model (and alignments):
>> DUF1365  Protein of unknown function (DUF1365)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.6   0.1   1.2e-54   2.2e-50      12     240 .]       2     264 ..       1     264 [. 0.84

  Alignments for each domain:
  == domain 1  score: 171.6 bits;  conditional E-value: 1.2e-54
     DUF1365  12 lpvkhaFsYplllllldldeleel............rlfsrnrlallslrdedyld.kkestslkekleellaeeggeeeelgkvwlltmprvlGyvfn 97 
                 +pvkh+FsY++ll ++++   +              +++s  r+++++++ +dyl+  +++ +lk kl+++la+++++++++ +++llt++++++y+ n
  KHJ30103.1   2 FPVKHSFSYSYLLTGVPIG-FKGSvgglisvdeekkNWVS--RKSWFTVHGDDYLArGHHPDGLKGKLQDFLASQKIDHTQYSHAYLLTAAKFMNYSSN 97 
                 79*********99999996.33222444433334333333..3456*********64555889***********9**999******************* PP

     DUF1365  98 PvsfyycydeekekleavvlEVsNTfgerhvYvlkad.............eagkdltfpKeFhVSPFndrdgsYrlrlkdplke....serlavrikll 179
                 Pvs++ +y++  ++l+a+vlEV+NTf+erh Y+l++              +++ ++++pK+F+VS Fndr+g+Y+l++ dpl++    s  ++++i+l 
  KHJ30103.1  98 PVSIWHLYSQT-NELKALVLEVNNTFDERHNYFLEPLpkplnispnagcvKTRYTSKWPKNFYVSTFNDRSGRYSLSAVDPLAPnltgSGYINMNITLS 195
                 ********887.89********************7778888777776654333337*************************999777657888888888 PP

     DUF1365 180 ses.ke.kltAtlklerkp.....ltaasllrallryplmtlltvvrIlyqAlkLh.lKrlpvyprpep 240
                   s ++ ++++ l+++++p     ++a + l++l +++++ ++t++r+l qA+kL+ ++++p+  rpep
  KHJ30103.1 196 GPSnDNaMIVTLLRSSNSPlypenMSAFEKLQFLSKWWWVGFATFPRTLQQAFKLFfRRKMPWAFRPEP 264
                 77743379999999999998888889*****************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (492 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       408  (0.0227564); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3551.42
//
Query:       KHJ30104.1  [L=238]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       704  (0.039266); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 1811.74
//
Query:       KHJ30105.1  [L=657]
Description: putative protein phosphatase regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-34  117.2   2.7    3.9e-34  117.2   2.7    2.2  2  CBM_21    Carbohydrate/starch-binding module (family 21)
    2.1e-08   34.6   5.1    2.7e-08   34.3   2.9    2.2  2  CBM53     Starch/carbohydrate-binding module (family 53)


Domain annotation for each model (and alignments):
>> CBM_21  Carbohydrate/starch-binding module (family 21)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.2      0.34     3e+03      57      98 ..     115     155 ..     104     168 .. 0.66
   2 !  117.2   2.7   4.4e-38   3.9e-34       4     112 ..     323     430 ..     320     431 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.34
      CBM_21  57 ksaeeslkenntdrFkFkiklknllnsekaklelcikYevne 98 
                 +s + ++++n++ +++F+ + +n+ + ++++l+l  k +vn+
  KHJ30105.1 115 ESLNLQNNSNRCKSWNFNHQKTNT-ARDEQDLQLSPKSKVNQ 155
                 455556677777888888855544.44556777766666655 PP

  == domain 2  score: 117.2 bits;  conditional E-value: 4.4e-38
      CBM_21   4 eqkvllerlelskdkkvlvGlvaVknlafeKavavrytldnWktilevpaeyvksaeeslkenntdrFkFkiklknllnsekaklelcikYevneeeyW 102
                  q v +er++ls+d+k+lvG++ V+nla++K+v vr+tld Wkt++ev ae+++++++  +e  +drF+F+ikl++l+n + +++ +c+kY+vn++eyW
  KHJ30105.1 323 AQAVRVERVFLSNDNKILVGSIIVANLAYKKSVVVRFTLDYWKTTSEVVAEFNQDSRQPIRE-GYDRFNFNIKLSDLANLDAKTMFFCVKYSVNGGEYW 420
                 5789**************************************************97776665.68********************************** PP

      CBM_21 103 dnNegkNYev 112
                 dnN++kN+++
  KHJ30105.1 421 DNNNYKNFQL 430
                 ********98 PP

>> CBM53  Starch/carbohydrate-binding module (family 53)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.42   3.7e+03      37      63 ..      71      92 ..      52     108 .. 0.64
   2 !   34.3   2.9     3e-12   2.7e-08       2      79 ..     348     430 ..     347     432 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.42
       CBM53 37 gdseedwfeatvtvpkeaseldfvfds 63
                ++++e  ++ ++++p+     +fv+d+
  KHJ30105.1 71 NSNDEMPYQGNLKIPQ-----NFVIDN 92
                2333444777777777.....677733 PP

  == domain 2  score: 34.3 bits;  conditional E-value: 3e-12
       CBM53   2 kvyYnkslakevtlhygfngWkssqdvamtks...assgdseedwfeatvtvpkea....seldfvfds..egeenWDNNngqnYkv 79 
                 +++Y+ks+     ++++ + Wk++++v ++     ++  +++ d+f +++++ + a    +++ f++++  +g+e+WDNNn +n+++
  KHJ30105.1 348 NLAYKKSV----VVRFTLDYWKTTSEVVAEFNqdsRQPIREGYDRFNFNIKLSDLAnldaKTMFFCVKYsvNGGEYWDNNNYKNFQL 430
                 67888888....**************99998877644456789**********988998677*****657***************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (657 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1042  (0.0581181); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 4526.32
//
Query:       KHJ30106.1  [L=271]
Description: putative nucleolar essential protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-78  262.1   0.0    3.3e-78  261.8   0.0    1.0  1  EMG1      EMG1/NEP1 methyltransferase


Domain annotation for each model (and alignments):
>> EMG1  EMG1/NEP1 methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  261.8   0.0   1.8e-82   3.3e-78       1     194 []      57     265 ..      57     265 .. 0.98

  Alignments for each domain:
  == domain 1  score: 261.8 bits;  conditional E-value: 1.8e-82
                 EEEEEES--B--GG..........SCGGSB--HHHHCGG.TTSTTGGGSS-CHHHHHHHHHHHCSCHHCTT.EEEEEEETTSEEEEE-TT----SSHHH CS
        EMG1   1 ivLeeasLelvkvk..........kkseqLLnsddhkkilkklkreakeaRpDIvHqcLlalldspLnkagllqvyihttknvlIevnpqtRiPrtfkr 89 
                 +vL +a+Le++k +          +++++LLnsd+h  +++k++r+ ++aRpDI+HqcLl+lldsp+nkag+lq+yiht+k+vlIev+p++R+Prtfkr
  KHJ30106.1  57 VVLSQACLETYKASyggnlpgshrEEKYSLLNSDEHIGVMRKMNRDISDARPDITHQCLLTLLDSPINKAGKLQIYIHTAKGVLIEVSPTVRLPRTFKR 155
                 89***********99************************************************************************************ PP

                 HHHHHHHHHCCSEEEETTEE.SCEEEECS-HHHHCCC.SEEEEE-TTSEE-..................EEEE-SSSS......---HHEEESSSS--- CS
        EMG1  90 FagLmvqLLkklsirategeekLlkviknpitdhlppgskiillsesaekklvdleefv.....vkpvvfvigamskgsvki..dykeeeisisnypLs 181
                 FagLm qLL++lsir+ +++ekLlkviknpi+dhlpp++++++ls++a+  lv+++e++     +++v++++gam+kgs+++  ++++e+isisn +Ls
  KHJ30106.1 156 FAGLMIQLLHRLSIRSVNSQEKLLKVIKNPISDHLPPNCRKVTLSFDAP--LVRVREYIesipdKESVCVFVGAMAKGSDNFadQFVDEKISISNFSLS 252
                 *************************************************..889*****9999888************9999999************** PP

                 HHHHHHHHHHHCH CS
        EMG1 182 aavvcskiltafE 194
                 a+v+csk+++a E
  KHJ30106.1 253 ASVACSKFCHAAE 265
                 **********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       331  (0.0184617); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1950.83
//
Query:       KHJ30107.1  [L=144]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1110.91
//
Query:       KHJ30108.1  [L=76]
Description: putative air1 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       272  (0.015171); expected 358.6 (0.02)
Passed bias filter:                      244  (0.0136092); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.24s 00:00:00.53 Elapsed: 00:00:00.35
# Mc/sec: 652.90
//
Query:       KHJ30109.1  [L=152]
Description: putative bzip transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-36  124.1   2.9    2.3e-36  123.6   2.9    1.2  1  DUF2205   Short coiled-coil protein
    0.00061   19.6   1.7    0.00074   19.4   1.7    1.1  1  TACC_C    Transforming acidic coiled-coil-containing protein 
     0.0029   17.5   3.7     0.0041   17.0   3.7    1.1  1  KASH_CCD  Coiled-coil region of CCDC155 or KASH


Domain annotation for each model (and alignments):
>> DUF2205  Short coiled-coil protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.6   2.9   3.9e-40   2.3e-36       1      74 [.      76     149 ..      76     150 .. 0.98

  Alignments for each domain:
  == domain 1  score: 123.6 bits;  conditional E-value: 3.9e-40
     DUF2205   1 msprrnsedveklerearerLqqqakeLqssLqaLaervdeVkeehdKLesenrfLqqYIgdLmstskvtqsts 74 
                 msprrns d+ek+++eare+Lqq+ak Lq+sL +++ r+++VkeehdKL+++n+fLq+YIg+Lmstsk+t+s++
  KHJ30109.1  76 MSPRRNSRDIEKMSEEAREQLQQHAKLLQKSLLDIFVRIEAVKEEHDKLDNNNKFLQKYIGNLMSTSKITSSGT 149
                 9**********************************************************************986 PP

>> TACC_C  Transforming acidic coiled-coil-containing protein (TACC), C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   1.7   1.2e-07   0.00074      66     125 ..      81     141 ..      63     150 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.2e-07
      TACC_C  66 akkeiqkvlee.keqlladlnsveksfsdlfkryekqkevlegykkneeslkkcaeeylar 125
                 ++++i+k+ ee +eql+++ + ++ks+ d+f r+e  ke  +++ +n+  l+k + +++++
  KHJ30109.1  81 NSRDIEKMSEEaREQLQQHAKLLQKSLLDIFVRIEAVKEEHDKLDNNNKFLQKYIGNLMST 141
                 567899988553899****************************************999876 PP

>> KASH_CCD  Coiled-coil region of CCDC155 or KASH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   3.7   6.9e-07    0.0041      73     131 ..      83     141 ..      79     146 .. 0.93

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 6.9e-07
    KASH_CCD  73 kalvkeleEkrarlkaqnkqlekenqsLiakiesLqeenikllaekdelkkklkeLlke 131
                 + + k +eE r++l++++k l+k    ++++ie+ +ee  kl  ++ +l+k + +L+++
  KHJ30109.1  83 RDIEKMSEEAREQLQQHAKLLQKSLLDIFVRIEAVKEEHDKLDNNNKFLQKYIGNLMST 141
                 6677999***********************************************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1649  (0.0919739); expected 358.6 (0.02)
Passed bias filter:                      712  (0.0397122); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.35
# Mc/sec: 1286.83
//
Query:       KHJ30110.1  [L=314]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
        4.3    7.1  11.6       0.54   10.0   4.6    2.7  3  DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit


Domain annotation for each model (and alignments):
>> DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0     0.033   5.9e+02      24      32 .]     166     174 ..     164     174 .. 0.85
   2 ?   -2.3   0.6      0.21   3.7e+03      19      23 ..     179     183 ..     176     185 .. 0.80
   3 ?   10.0   4.6     3e-05      0.54       3      24 ..     198     221 ..     197     226 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.033
                     -----B--- CS
  DNA_RNApol_7kD  24 GhRilYKkR 32 
                     G  +lYK+R
      KHJ30110.1 166 GVAVLYKPR 174
                     6679***99 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.21
                     --SSS CS
  DNA_RNApol_7kD  19 RCkeC 23 
                     +Ck C
      KHJ30110.1 179 KCKRC 183
                     68888 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 3e-05
                     -SSS--B--.--S.SS----SSS- CS
  DNA_RNApol_7kD   3 CgeCgaevs.lkk.gdpiRCkeCG 24 
                     C +C++ +  +++ ++pi+C++CG
      KHJ30110.1 198 CENCSSTMPsINEcKAPIKCRNCG 221
                     889999998754338********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       702  (0.0391544); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.21s 00:00:00.64 Elapsed: 00:00:00.36
# Mc/sec: 2623.27
//
Query:       KHJ30111.1  [L=151]
Description: hypothetical protein EV44_g4328 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0007   19.2   2.9     0.0013   18.4   2.9    1.4  1  zf-CCHC_5  GAG-polyprotein viral zinc-finger
  ------ inclusion threshold ------
      0.041   14.1   0.1      0.051   13.7   0.1    1.1  1  End3       Actin cytoskeleton-regulatory complex protein END3
      0.055   13.2   0.9       0.46   10.3   0.8    2.1  2  zf-CCHC_4  Zinc knuckle
       0.16   12.1   0.7       0.16   12.1   0.7    1.8  2  zf-CCHC    Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   2.9     3e-07    0.0013       2      19 ..     103     120 ..     102     122 .. 0.93

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 3e-07
                 --B-TTT-SSBS-TTT-- CS
   zf-CCHC_5   2 pglCpRCkkgkHwardCh 19 
                  +lC+RCk+  H ar C+
  KHJ30111.1 103 KNLCLRCKRAGHMARFCK 120
                 59***************7 PP

>> End3  Actin cytoskeleton-regulatory complex protein END3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   1.1e-05     0.051      57     144 ..      13     100 ..       5     114 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.1e-05
        End3  57 sksetstgkkakfgdsylsrlGvgsksekgtdfsatk.gtdweevrLkreLaeLeeklekveeeaekrkekereessksalvkreleqL 144
                 +++++ ++++ ++  +yl+  ++  ++++g+++s+ + + d  +  +k +L+ L +++++++ e+++ k++ +++ s++ l+ +e+ +L
  KHJ30111.1  13 AQTTQYASRSGALQSEYLTGSTIK-QTPSGSTVSSMDnDGDTIMGGMKIDLHSLATLVAQIKVEKDQTKSSANSKPSAPWLTEKEVAEL 100
                 566777788888999999877654.458888888888799999*******************999988888999999999999998876 PP

>> zf-CCHC_4  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.14   6.1e+02       6      19 ..      67      80 ..      65      83 .. 0.84
   2 ?   10.3   0.8    0.0001      0.46      31      48 ..     103     120 ..     101     121 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.14
   zf-CCHC_4  6 pLrafmkikkesGe 19
                +L+a++k++k++ +
  KHJ30111.1 67 TLVAQIKVEKDQTK 80
                79*******99876 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0001
   zf-CCHC_4  31 rsfCyiCgvlGHsdkrCd 48 
                 +++C  C + GH +++C+
  KHJ30111.1 103 KNLCLRCKRAGHMARFCK 120
                 689**************8 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.7   3.5e-05      0.16       3      18 .]     106     121 ..     104     121 .. 0.88
   2 ?   -1.3   0.1      0.62   2.8e+03       4       6 ..     140     142 ..     140     144 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.5e-05
                 TSSSSSSSSTTTTSTS CS
     zf-CCHC   3 CynCGepGHiardCpk 18 
                 C +C + GH+ar C+k
  KHJ30111.1 106 CLRCKRAGHMARFCKK 121
                 779*********9986 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.62
                 SSS CS
     zf-CCHC   4 ynC 6  
                 ynC
  KHJ30111.1 140 YNC 142
                 999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.38u 0.20s 00:00:00.58 Elapsed: 00:00:00.36
# Mc/sec: 1271.69
//
Query:       KHJ30112.1  [L=764]
Description: hypothetical protein EV44_g2924 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.14   12.7   2.6         15    6.3   0.0    3.4  3  PACT_coil_coil  Pericentrin-AKAP-450 domain of centrosomal ta
        1.4    8.7   7.3       0.38   10.5   1.2    2.8  2  Fungal_KA1      Fungal kinase associated-1 domain


Domain annotation for each model (and alignments):
>> PACT_coil_coil  Pericentrin-AKAP-450 domain of centrosomal targeting protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1    0.0057        51      20      45 ..      11      36 ..      10      65 .. 0.71
   2 ?    6.3   0.0    0.0016        15      23      45 ..     164     186 ..     161     239 .. 0.86
   3 ?   -1.6   0.1      0.47   4.3e+03      24      47 ..     347     376 ..     344     396 .. 0.62

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0057
  PACT_coil_coil 20 llqlevfqacnkadlrllarigvelk 45
                    l+ l++ ++ n+a++++la+i+ +  
      KHJ30112.1 11 LTNLHGLEQKNEAQISILADIRQTDV 36
                    678999***************99874 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0016
  PACT_coil_coil  23 levfqacnkadlrllarigvelk 45 
                     l+vf ++nka+l+ll++ig +++
      KHJ30112.1 164 LDVFGQNNKAQLELLREIGEKIN 186
                     8999***************9983 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.47
  PACT_coil_coil  24 evfqacnkadlrllarigvelkk......k 47 
                     +  q+  k++ +ll++++ ++ +      +
      KHJ30112.1 347 SSDQKLAKMEGKLLQDMEYSIDNlkhsslS 376
                     566788889999999999999644222221 PP

>> Fungal_KA1  Fungal kinase associated-1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.3     0.074   6.7e+02      46      82 ..      67     105 ..      62     128 .. 0.82
   2 ?   10.5   1.2   4.3e-05      0.38      16     113 ..     233     338 ..     214     341 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.074
  Fungal_KA1  46 dvksdkesntitgkvsseN..ilslksvkFeieiisvse 82 
                 + +++ + + i+ k+s +N    ++++v ++ ei+ + +
  KHJ30112.1  67 SAEISTNFQDIRQKISDQNsvLAEIRAVDISSEILMNMQ 105
                 56677788899999***9955569999999999998875 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 4.3e-05
  Fungal_KA1  16 t........kvlktslskkelrqelaklLreWkkyGlkdvksdkesntitgkvsseNilslksvkFeieiisvsehklSlvrftkekGsassfrklvke 106
                          ++l++s +++++ +e+ ++L+  ++  lk+ + d     ++++v+++Ni++    ++  +++ + + ++  + f+  + +++ f+k  ++
  KHJ30112.1 233 IqhkfpmdfEQLDLSAKSTKISEEISNILQMVQDLKLKTFEFDALLLALKCEVQESNIITKNISRYFNNLMLKDSCHSREISFNVASENSKEFTKTSEN 331
                 45666666689**********************************************876444444344444443366667777777777777777777 PP

  Fungal_KA1 107 iekvlrk 113
                 +e+ l++
  KHJ30112.1 332 LESYLKD 338
                 7776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (764 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1860  (0.103743); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.26s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 5324.49
//
Query:       KHJ30113.1  [L=400]
Description: putative bag domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-18   67.4   0.6    3.1e-18   66.0   0.6    1.8  1  BAG       BAG domain


Domain annotation for each model (and alignments):
>> BAG  BAG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.0   0.6   1.7e-22   3.1e-18       3      74 ..     319     396 ..     317     397 .. 0.94

  Alignments for each domain:
  == domain 1  score: 66.0 bits;  conditional E-value: 1.7e-22
                 HHHHHHHHH.HHHHHHHHHHH.......HHH..HHHHHHHHH.HHHHHTCEESTHHHHHHHHHHHHHHHHHHHHHHHH CS
         BAG   3 eilkevetllepeveafektv.....kkekeylylsElLlkl.LlkLDsieiegdeeaRekRKeavkevqkllkklDs 74 
                 +++++++t+l p + +f++++     kke ey++lsE+ +++  lkLD++e++gd +aRe RK++vke q++l klD+
  KHJ30113.1 319 KLSNHLHTNLAPLCYQFIESPpedekKKEFEYRKLSETMMNEvVLKLDAVETDGDNDAREMRKAIVKEAQEVLIKLDA 396
                 678899*****************99877999999*******************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1100  (0.0613531); expected 358.6 (0.02)
Passed bias filter:                      640  (0.0356964); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 2926.44
//
Query:       KHJ30114.1  [L=493]
Description: putative candidate secreted effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (493 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3560.81
//
Query:       KHJ30115.1  [L=493]
Description: hypothetical protein EV44_g0521 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (493 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3713.21
//
Query:       KHJ30116.1  [L=1042]
Description: putative rna interference and gene silencing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-72  244.4   0.0    2.2e-72  243.8   0.0    1.3  1  Piwi      Piwi domain
    4.4e-14   51.9   0.1    2.2e-13   49.6   0.1    2.3  2  ArgoL1    Argonaute linker 1 domain
    6.4e-12   45.6   0.0    1.3e-11   44.6   0.0    1.6  1  ArgoL2    Argonaute linker 2 domain
    1.4e-09   38.7   0.0    2.6e-09   37.8   0.0    1.5  1  ArgoN     N-terminal domain of argonaute
    1.9e-07   31.0   0.0    8.1e-07   28.9   0.0    2.0  2  PAZ       PAZ domain
    5.8e-07   29.7   0.0    1.3e-06   28.5   0.0    1.6  1  ArgoMid   Mid domain of argonaute


Domain annotation for each model (and alignments):
>> Piwi  Piwi domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  243.8   0.0   7.5e-76   2.2e-72       1     300 [.     684    1003 ..     684    1005 .. 0.92

  Alignments for each domain:
  == domain 1  score: 243.8 bits;  conditional E-value: 7.5e-76
                  EEEEEECSSGHHCHHHHHHHHHHTCCCCEEEEEHHHHCTCCHHHHHHHHHHHHHHHHTT-BS-EEESSSTTSSE.....EEEEEEEEEECCC.SCCC CS
        Piwi    1 lilvilpekkkdkyheikkyletdlgiisqcillktilkrqlkkqtltnvllkinvKlGgknvliveikleldv.sptliiGidishgtagt.vdnp 95  
                  l+l+ilp++ +  y++ik   +t  gi++ c+  ++  k+q+++q+  nv+lk+n+K Gg+n  +  +kl +    +t+++Gid++h++ g  ++ p
  KHJ30116.1  684 LVLCILPRNDTGLYSSIKTAADTLAGIHTVCCVNSKFTKQQRQEQYFGNVALKFNLKAGGINHILDPAKLGIVSeGKTMVVGIDVTHPSPGSrEGAP 780 
                  589*************************************99********************999999998866899************999899** PP

                  EEEEEEEEEETSSEEEEEEEEESSCCC.CHHHHHHHHHHHHHHHHHHTTTT-TTSEEEEEESS....S..S-HHHHHHHHHHHHH......HHHHCT CS
        Piwi   96 svaavvasldkensrylaevstqassq.elleklkeiikellrefkksskkkkperiivyRdGvseGqfkqvlnsEvkelkealk......klkeqy 185 
                  sva++vas+dk   ++ + +s qa+s+ e++ +l+  ++  l+ ++k ++ ++pe+i++yRdGvseGq+k vl++E++++++a++      + k+  
  KHJ30116.1  781 SVAGIVASVDKFLGQWPSAFSIQAKSKtEMVSDLQGLFASRLQLWQKRNQGQLPENILIYRDGVSEGQYKLVLQEEIPQIRNACRlqypatDTKR-- 875 
                  **********99999999999988765288888****************************************************8776433333.. PP

                  T.TEEEEEEEECSCS--EEESESTC..CCEETTTCEEETTEEEEEEEECCEEECCCCEEEEEEEEEEEEEEES............S-CCHHHHHHHH CS
        Piwi  186 q.pkltvivvqkrhhtrfFasdkae..ksqnippGtvvdkkitlpeekdfylcshaglqgtvkPtkytvlvdea..........klsadelqsltyk 269 
                  + pkltv+v  krhhtrf++++  e  +s+n   Gtvvd  +t++ + dfyl +ha lqgt++ ++y v++de+          +  ad+l++lt++
  KHJ30116.1  876 GlPKLTVVVCGKRHHTRFYPKSTGEadRSFNCVAGTVVDRGVTETRNWDFYLQAHACLQGTARACHYYVILDEIfrsgkvkaphRNHADSLEDLTHN 972 
                  25******************9988888**********************************************855553333334468********* PP

                  HCTGGTTTTSS-SS-HHHHHHHHHHHHHHTC CS
        Piwi  270 lchmyqrstrsvsiPapvyyAhklAkrvrnn 300 
                  ++h++ r+t++vs+ +p+yyA++l +rvr++
  KHJ30116.1  973 MSHLFGRATKAVSLCPPAYYADLLCTRVRCY 1003
                  ****************************986 PP

>> ArgoL1  Argonaute linker 1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.6   0.1   7.3e-17   2.2e-13       2      51 ..     305     356 ..     304     357 .. 0.88
   2 ?   -2.3   0.0       1.3   3.8e+03      27      39 ..     695     707 ..     694     708 .. 0.81

  Alignments for each domain:
  == domain 1  score: 49.6 bits;  conditional E-value: 7.3e-17
      ArgoL1   2 vgrsFfspp...skqrvdLggggleawrGfyqSvRptqggLllNvDvsntaFy 51 
                 ++r+F  +p   + ++ dL +ggl+ +rG++qS+Rp++gg+llNv++ +++F+
  KHJ30116.1 305 QNRHFAIEPngtGYHSWDL-DGGLVSLRGYFQSARPATGGILLNVNTVHGVFF 356
                 699****99777445559*.66******************************8 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.3
      ArgoL1  27 GfyqSvRptqggL 39 
                 G y+S++ + + L
  KHJ30116.1 695 GLYSSIKTAADTL 707
                 99****9987665 PP

>> ArgoL2  Argonaute linker 2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.0   4.3e-15   1.3e-11       1      47 []     530     578 ..     530     578 .. 0.94

  Alignments for each domain:
  == domain 1  score: 44.6 bits;  conditional E-value: 4.3e-15
      ArgoL2   1 eRkksIle.gvkvlgydd.dpylrafGisidpqmttVpGRvLppPtlkY 47 
                 +++ s+++ g++vl+++  +p+l++fG++++++++ V++RvL+pP+++Y
  KHJ30116.1 530 QNATSVVQdGRHVLSLNSsNPVLSEFGLQVGQSLISVNARVLQPPSVRY 578
                 699999999*******8867888************************99 PP

>> ArgoN  N-terminal domain of argonaute
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.0   8.7e-13   2.6e-09       1     137 [.     142     289 ..     142     290 .. 0.72

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 8.7e-13
       ArgoN   1 rpiklraNyFkvtslpdktlyhYd........veit........kkakrvg....lrriiellleeykkselagkkpayDgrknlysakkLp....kef 75 
                 +++++ aNy k+++++d  l +Y+           +        k          l+rii+lll+ +   e++g  +a  ++++++s+k+L+    ++f
  KHJ30116.1 142 KKVEVFANYIKIQAPKDLLLTRYNievipkpdE--NssgkaadsKV----PtgkkLKRIIQLLLKLP---EFSG--VASEWKSMVVSSKPLNirdgQQF 229
                 689**********99999******655544440..04454544322....1334579*******643...4566..888************99999999 PP

       ArgoN  76 e.dl.paaeesakkepsekrrrksrtfkvtikfaksinlqsLleylrgkq....deasleaiqaLdiv 137
                 e +  + ++       +++  +++++f v+     s+++++ ++yl+  +     ++ le+iq+L+ v
  KHJ30116.1 230 EiKYvE-DG-------HDEALDRAKSFLVRAVTPLSFSVSDYVNYLSATTpnakFSHGLETIQVLNAV 289
                 998877.22.......2234566779***9999967**********63322233555666******87 PP

>> PAZ  PAZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   2.7e-10   8.1e-07      41     135 ..     437     519 ..     428     521 .. 0.81
   2 ?   -1.5   0.0      0.69     2e+03      46      73 ..     708     730 ..     706     732 .. 0.79

  Alignments for each domain:
  == domain 1  score: 28.9 bits;  conditional E-value: 2.7e-10
                 CEEEEEEEESS..--TTSEECCTTCT..CECCHHHHCCT---ST-TT--EEEEEES-SS----EEEEE-CCCCEEESSBCCCCCTCCCHHHHCCCH. CS
         PAZ  41 ktyyvadittd..lapsstFpdkdkeneitfaeYfkkkYnieikdqdqplldvdkktesehssqkqiLvpElcdihpisasqrykkkllpsilqrln 135
                 +++y+ d   d  +a ss++p +    +it+++Yfk kY     + + ++++v++      s ++++L+ E+c +   +++q  kkkl    +q+ +
  KHJ30116.1 437 VRFYISDRAGDsgSAASSSLPVN---SYITIYDYFKIKYPQVNLNPSNSVVNVGS------SLRPNYLPAEVCIM---VPGQPVKKKL--GPNQTQE 519
                 56777776555447889999999...79***********754455789*******......89************...*********9..5555544 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.69
                 EEEESS--TTSEECCTTCT..CECCHHH CS
         PAZ  46 adittdlapsstFpdkdkeneitfaeYf 73 
                 a+i+t  + +s+F++++++     ++Yf
  KHJ30116.1 708 AGIHTVCCVNSKFTKQQRQ-----EQYF 730
                 789999999*****99766.....4444 PP

>> ArgoMid  Mid domain of argonaute
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0   4.4e-10   1.3e-06       1      56 [.     585     641 ..     585     676 .. 0.85

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 4.4e-10
     ArgoMid   1 tprnGsWdmrgkqFlepkakikkWAilcfa..sqrkvkenkledfikqlvkiskdvgi 56 
                 +prnGsW+m + +F++p aki  W++++f    ++ ++  ++++ +  ++ +++++g+
  KHJ30116.1 585 SPRNGSWNMINVRFHTP-AKIGPWTCIMFPtqGRNDIDVGNMRSHVTAFQAQLQAAGV 641
                 69***************.***********84345567777888888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1042 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       439  (0.0244855); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.44
# Mc/sec: 7120.30
//
Query:       KHJ30117.1  [L=232]
Description: hypothetical protein EV44_g3243 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.11   12.4   0.1       0.22   11.5   0.1    1.4  1  YhfH      YhfH-like protein


Domain annotation for each model (and alignments):
>> YhfH  YhfH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   1.2e-05      0.22       8      21 ..     214     227 ..     209     230 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 1.2e-05
        YhfH   8 frnLPkKkCteCGk 21 
                  r++++K+C  CGk
  KHJ30117.1 214 NRRIEAKQCERCGK 227
                 599**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1766.90
//
Query:       KHJ30118.1  [L=97]
Description: hypothetical protein EV44_g4420 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1983  (0.110603); expected 358.6 (0.02)
Passed bias filter:                      639  (0.0356406); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 793.20
//
Query:       KHJ30119.1  [L=407]
Description: putative pyruvate dehydrogenase e1 component alpha subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   4.7e-108  360.7   0.2   5.9e-108  360.4   0.2    1.1  1  E1_dh           Dehydrogenase E1 component
     0.0001   21.6   0.4    0.00024   20.4   0.1    1.7  2  DXP_synthase_N  1-deoxy-D-xylulose-5-phosphate synthase
  ------ inclusion threshold ------
       0.25   11.5   0.4       0.62   10.2   0.4    1.6  1  COMM_domain     COMM domain
       0.67   11.0   7.1        0.7   10.9   0.3    3.2  2  KRTAP7          KRTAP type 7 family


Domain annotation for each model (and alignments):
>> E1_dh  Dehydrogenase E1 component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  360.4   0.2  1.3e-111  5.9e-108       2     298 ..      83     376 ..      82     378 .. 0.98

  Alignments for each domain:
  == domain 1  score: 360.4 bits;  conditional E-value: 1.3e-111
                 HHHHHHHHHHHHHHHHHTTSS-S-----TT-HHHHHHHHHTS-TTSEEEESS--HHHHHHTT--HHHHHHHHTT-T....TTSSGTT-.-E..BTT..B CS
       E1_dh   2 klvllrrvedaldalykrkkrigfyhlsagqealkvgiaaalekeDliiteYReagvllarglsleeilaeltgkv....kgkggsrhelmyaekesri 96 
                 ++ ++rr+e a+d+lyk+kk++gf+hls gqea++vgi++al ++D +it+YR++g+ ++rg+++++++ el g++     gkggs+h +   +k+  +
  KHJ30119.1  83 NMLTVRRMELAADRLYKEKKIRGFCHLSTGQEAVAVGIEHALRPGDDVITAYRCHGFAYMRGATVKSVIGELLGRRegiaYGKGGSMH-MF--TKG--F 176
                 7899************************************************************************99999*******.77..788..* PP

                 EEE-SSTTTHHHHHHHHHHHHHHHTS---EEEEEEGGGTT-HHHHHHHHHHHHTT--EEEEEEEESEETTEEHHHH-S---GGG..TTTTS-EEEEETT CS
       E1_dh  97 lggngivgaqvplvaGialaakiegkkevailliGDgAanqGdvyealnlaalwklpvifvveNNkygisTeaekasaskeladrargvgipglrVdgn 195
                 +ggngivgaqvp++aG+a+a+k++g+ ++++ l+GDgA+nqG+v+ea+n+a+lw+lpv+f +eNNkyg++T+ +++sa +e+++  rg++ipg++V+g+
  KHJ30119.1 177 YGGNGIVGAQVPVGAGLAFAHKYKGNSNCTVSLYGDGASNQGQVFEAFNMAKLWNLPVLFGCENNKYGMGTSIQRSSALTEFYK--RGQYIPGIKVNGM 273
                 ************************************************************************************..************* PP

                 SHHHHHHHHHHHHHHHHTTT--EEEEEEE--SS-SSTTSHSHSSSHHHHHHHHHHHH-HHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHHHHHHHS CS
       E1_dh 196 DplavyeAvkfAaeraregkgpllielvtYRyggHsesDdpstyrtreeveevrkkkdpiqrlkelLvkkgvvseeelkeiekevrkeveeavkkaesk 294
                  +lav++Av   + +a +g+gp++ e+vtYRyggHs+sD+++tyrtree++ +r+++dpi++lk++L++++  se + keie evr++v+ +v +ae+ 
  KHJ30119.1 274 NVLAVKAAVAHGRAWAAAGNGPIVYEYVTYRYGGHSMSDPGTTYRTREEIQLMRSTQDPIAGLKHKLIEWNAFSETQIKEIEMEVREAVDREVSEAEKM 372
                 *************************************************************************************************98 PP

                 ---- CS
       E1_dh 295 kele 298
                 + +e
  KHJ30119.1 373 EAPE 376
                 7775 PP

>> DXP_synthase_N  1-deoxy-D-xylulose-5-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.1   5.4e-08   0.00024     115     178 ..     185     248 ..     178     291 .. 0.81
   2 ?   -2.7   0.0      0.62   2.8e+03      13     219 ..     346     368 ..     328     388 .. 0.55

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 5.4e-08
  DXP_synthase_N 115 tsisaalGlavardlkgekkkvvaviGDgaltgGmafealnnigelkkkllvilNdNemsiskn 178
                     + + ++ Gla a+++kg+++ +v++ GDga   G  fea+n ++  +  +l    +N+  + ++
      KHJ30119.1 185 AQVPVGAGLAFAHKYKGNSNCTVSLYGDGASNQGQVFEAFNMAKLWNLPVLFGCENNKYGMGTS 248
                     5667899***********************************9998888887777777665555 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.62
  DXP_synthase_N  13 lskeeleelaeelrefliesvsktggHlasnLgvveLtlalhyvfdtpkDklvwDvgHqaYvhKiltgRkdkfktlrqkgGlsgfpkrsEseyDa 107
                     +s+++++e+  e+re + ++vs                                                                         
      KHJ30119.1 346 FSETQIKEIEMEVREAVDREVS------------------------------------------------------------------------- 367
                     3444444444444444433333......................................................................... PP

  DXP_synthase_N 108 feagHsstsisaalGlavardlkgekkkvvaviGDgaltgGmafealnnigelkkkllvilNdNemsisknvGalskylskllsskayeklkkev 202
                                                                                                                    
      KHJ30119.1   - -----------------------------------------------------------------------------------------------   -
                     ............................................................................................... PP

  DXP_synthase_N 203 kkllkkigkklaelakk 219
                                     +
      KHJ30119.1 368 ----------------E 368
                     ................3 PP

>> COMM_domain  COMM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.4   0.00014      0.62      34      64 ..      53      88 ..      43      90 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00014
  COMM_domain 34 lqngsgnsen.....vtlelskeqLqeLlneLeeiq 64
                 l+n+s ++ +     +tle++k++L+e+l+++ +++
   KHJ30119.1 53 LSNESFETYEfeepsFTLETTKNELKEMLYNMLTVR 88
                 5555443333555679***************97766 PP

>> KRTAP7  KRTAP type 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.4     0.086   3.8e+02      34      69 ..     187     222 ..     180     238 .. 0.85
   2 ?   10.9   0.3   0.00016       0.7       1      69 [.     255     318 ..     255     321 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.086
      KRTAP7  34 vplgsplnygygyngysslgysfggsnlsnlgccyg 69 
                 vp+g+ l +   y+g s  + s  g   sn+g  + 
  KHJ30119.1 187 VPVGAGLAFAHKYKGNSNCTVSLYGDGASNQGQVFE 222
                 8****************9999999998899887664 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00016
      KRTAP7   1 mtrffscgsyfpgylsygtnfhrtfratplncvvplg.splnygygyngysslgysfggsnlsnlgccyg 69 
                 +t f+  g+y+pg    g n             v  g +    g g  +y   +y +gg  +s++g +y 
  KHJ30119.1 255 LTEFYKRGQYIPGIKVNGMNVLAVK------AAVAHGrAWAAAGNGPIVYEYVTYRYGGHSMSDPGTTYR 318
                 5899999*********999976543......3444451445689999999****************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       639  (0.0356406); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3044.29
//
Query:       KHJ30120.1  [L=129]
Description: hypothetical protein EV44_g1060 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00095   18.9   0.1     0.0044   16.8   0.0    1.9  2  Robl_LC7  Roadblock/LC7 domain


Domain annotation for each model (and alignments):
>> Robl_LC7  Roadblock/LC7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0     0.044   7.8e+02       9      41 ..      18      38 ..      10      61 .. 0.62
   2 !   16.8   0.0   2.4e-07    0.0044      52      89 ..      86     123 ..      81     125 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.044
                CCHHCTECEEEEEETTS-EEEECCSSSS-HHHH CS
    Robl_LC7  9 lqsvpgvrgalvvskdGlviatstldnddadql 41
                l s + v  +l             +d++ + +l
  KHJ30120.1 18 LSSKTSVIATLA------------IDRKTSTIL 38
                444444444444............444444444 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 2.4e-07
                 HHHHHHHCT.SSSECEEEEEETTEEEEEEECTTTEEEEE CS
    Robl_LC7  52 akaaarelg.egelkelliegkkgelyltpagegalLvv 89 
                 +++++ e++ e++lk l++++kk el+++p ++ +++vv
  KHJ30120.1  86 TSKMILEIDqEDDLKLLRVRTKKYELVIVPDNN-YIFVV 123
                 689999***************************.77776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1054.12
//
Query:       KHJ30121.1  [L=936]
Description: putative helicase-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   11.4   0.3        0.2   10.7   0.3    1.2  1  SAP130_C  Histone deacetylase complex subunit SAP130 C-termin


Domain annotation for each model (and alignments):
>> SAP130_C  Histone deacetylase complex subunit SAP130 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.3   1.1e-05       0.2      80     165 ..     788     873 ..     759     905 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 1.1e-05
    SAP130_C  80 sseqqalsalptsqhpaqaiptllaaaappsqpsavlsalpaavavtppvpaslanvvasptqpaasstaaaavssvvpeikikqe 165
                 ++e   +s++ + +  +   p  +  ++ p   + + + lp +  ++ p+ +s+a++ ++pt p+ s+++  ++ss +p+i + + 
  KHJ30121.1 788 NTEALLNSVNSSYNSLPPMSPITMQGSGHPLHKAFTYTKLPLSHVLSIPLRTSFATLLTPPTSPTLSQSSLHTTSSNIPKILVIDC 873
                 55555555533333333444444555567777888999******************************************988543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (936 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       355  (0.0198003); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 6669.15
//
Query:       KHJ30122.1  [L=69]
Description: hypothetical protein EV44_g2314 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.012   15.6   3.7      0.012   15.6   3.7    1.1  1  Auxin_canalis  Auxin canalisation
      0.031   14.0   0.1      0.033   13.9   0.1    1.0  1  Lipoprotein_X  Mycoplasma MG185/MG260 protein
       0.12   12.5   4.9       0.14   12.2   4.9    1.2  1  ETRAMP         Malarial early transcribed membrane protein (E


Domain annotation for each model (and alignments):
>> Auxin_canalis  Auxin canalisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   3.7     2e-06     0.012     116     155 ..      26      66 ..       7      69 .] 0.67

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2e-06
  Auxin_canalis 116 tvgrwl.kdrkekkkeeaRaqnAqvhAavSvAgvAAAvAAv 155
                    + g+   k +k+kkk++       v  av+vA+vAAA AA 
     KHJ30122.1  26 SFGHICaKKKKKKKKKKGLLGLSSVAVAVAVAAVAAAAAAA 66 
                    55555535566666666667777788888888888877764 PP

>> Lipoprotein_X  Mycoplasma MG185/MG260 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1   5.5e-06     0.033      48      87 ..      26      67 ..      19      69 .] 0.84

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 5.5e-06
  Lipoprotein_X 48 sFkn..aksskkkesaqgvlGvDdtanllftsvfaaaggnyd 87
                   sF    ak++kkk++++g+lG+ ++a +++ ++ aaa+   +
     KHJ30122.1 26 SFGHicAKKKKKKKKKKGLLGLSSVAVAVAVAAVAAAAAAAS 67
                   66666678999*******************999998876655 PP

>> ETRAMP  Malarial early transcribed membrane protein (ETRAMP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   4.9   2.3e-05      0.14      45      73 ..      34      62 ..      18      69 .] 0.62

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.3e-05
      ETRAMP 45 kiekkkkkkKliiistiatalallvasal 73
                k +kkkkkk l+ +s++a+a+a+++++a 
  KHJ30122.1 34 KKKKKKKKKGLLGLSSVAVAVAVAAVAAA 62
                33344344444557777777776665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1169  (0.0652016); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 516.55
//
Query:       KHJ30123.1  [L=651]
Description: putative atp-dependent rna helicase ded1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-49  167.5   0.0    8.1e-49  165.8   0.0    1.7  2  DEAD        DEAD/DEAH box helicase
    4.5e-32  110.7   0.0    1.3e-31  109.2   0.0    1.8  2  Helicase_C  Helicase conserved C-terminal domain
     0.0062   16.6   0.0      0.011   15.7   0.0    1.4  1  ResIII      Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.023   14.1   0.0      0.041   13.2   0.0    1.3  1  CMS1        U3-containing 90S pre-ribosomal complex subunit


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.8   0.0   1.8e-52   8.1e-49       1     175 [.     191     377 ..     191     378 .. 0.93
   2 ?   -1.3   0.0      0.35   1.6e+03      64     105 ..     439     484 ..     431     492 .. 0.69

  Alignments for each domain:
  == domain 1  score: 165.8 bits;  conditional E-value: 1.8e-52
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS...............TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet...............kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliigg 84 
                 t++Q+ +ip+++gg+d++++a+TGsGKT+ fl+p+l++ + +               ++k  p  li++PtreL+ q++++ +kf     +r ++++gg
  KHJ30123.1 191 TPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILSQAFINgpsavpagtggnygrQRKAYPTSLILAPTRELVSQIFEESRKFAYRSWVRPCVVYGG 289
                 79**********************************66555569****99999999989999*************************9889******** PP

                 SSHHHHHHHHHTTCSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  85 vaardqlskldngvdivvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvkk 175
                  +  +ql+++++g+d++v+tpgrl+dl+++g+++l+++++lVlDEadr+ld+gf+++i+ri++q +     g ++rq++++SAT+p+d++ 
  KHJ30123.1 290 ADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMGFEPQIRRIVEQED---MPGVQSRQTLMFSATFPRDIQM 377
                 ****************************************************************93...33336778**********9986 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.35
                 HHHHHHHTTTSTSEEEEEETTSSHHHHHHHH...HTT.CSEEEEEH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxx.xxxxxxxx RF
        DEAD  64 lnnlkkfkkyidlrvlliiggvaardqlskl...dng.vdivvgtp 105
                 ++ l+ f+ + +  + +i g+ ++r+  ++l   +ng + i+v+t 
  KHJ30123.1 439 ADSLSDFLINQNFPATSIHGDRTQRERERALemfRNGrCPILVATA 484
                 55566666665566677777666666666663335778****9995 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.3   5.7e+03      18      72 ..     254     308 ..     248     329 .. 0.63
   2 !  109.2   0.0   2.9e-35   1.3e-31       1     111 []     412     521 ..     412     521 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.3
                 EEEEEESSHHHHHHHHHHHHHT......TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEE CS
  Helicase_C  18 kilifvntidrlekvklllekk......gikvavlhgelpqnereeileqfnkgesdvLia 72 
                 ++li ++t++ ++  ++++e++       ++ +v++g     ++++ +e+     +d+L+a
  KHJ30123.1 254 TSLILAPTRELVS--QIFEESRkfayrsWVRPCVVYGGADIGSQLRQIERG----CDLLVA 308
                 5678888888775..555443323333245666666655555555555544....455555 PP

  == domain 2  score: 109.2 bits;  conditional E-value: 2.9e-35
                 HHHHHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHH CS
  Helicase_C   1 dkleallellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvts 99 
                 dk + ll++l +++ +g +lifv+t++++++++ +l ++++ ++ +hg+ +q+ere++le f++g++ +L+at va+rG+dip+v++V+n+dlp+++++
  KHJ30123.1 412 DKRSVLLDIL-HTHGTGLSLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDD 509
                 5778899999.999***************99777778889*********************************************************** PP

                 HHHHHTTSSSTT CS
  Helicase_C 100 yiqriGRtgRag 111
                 y++riGRtgRag
  KHJ30123.1 510 YVHRIGRTGRAG 521
                 **********97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   2.5e-06     0.011      28     170 ..     208     372 ..     178     373 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 2.5e-06
                 EEEESTTSTHHHHH.HHHHHHH-S......................-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--........-SEE CS
      ResIII  28 likmaTGtGKTlva.aklierllkkgkee.................kflflvprkslleqtleefkkflseaykeigkkvsgdkkka.kekdstnkkil 107
                 +  + TG+GKT    + +  + + +g+                     l+l+p+++l++q  ee +kf+     + + ++ g    +  ++ +  +++l
  KHJ30123.1 208 MACAQTGSGKTGGFlFPILSQAFINGPSAvpagtggnygrqrkaypTSLILAPTRELVSQIFEESRKFAYRSWVRPCVVYGGADIGSqLRQIERGCDLL 306
                 556789*****9876888889999888889999*********99999******************99998887664444333333334455689***** PP

                 EEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS....TTTHHHHHT-.....--SEEEEEESS-S CS
      ResIII 108 vttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak...kswreilekf.....keavllglTATpe 170
                 v+t  +l   +     e+ + + +++++++ DEa r+ ++    ++r+i+e+      ++   l ++AT++
  KHJ30123.1 307 VATPGRLVDLI-----ERGRISLQNIKYLVLDEADRMLDMgfePQIRRIVEQEdmpgvQSRQTLMFSATFP 372
                 ***********.....89999999***************977669999966653334466999******97 PP

>> CMS1  U3-containing 90S pre-ribosomal complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   9.1e-06     0.041     182     209 ..     307     334 ..     299     339 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 9.1e-06
        CMS1 182 vGtpgRildLleeeslsvdeLkrivlDa 209
                 v tpgR++dL+e + +s++++k++vlD 
  KHJ30123.1 307 VATPGRLVDLIERGRISLQNIKYLVLDE 334
                 78************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (651 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.23s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 4706.67
//
Query:       KHJ30124.1  [L=121]
Description: hypothetical protein EV44_g4307 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.025   14.2   0.0      0.028   14.1   0.0    1.2  1  DUF943    Enterobacterial putative membrane protein (DUF943)


Domain annotation for each model (and alignments):
>> DUF943  Enterobacterial putative membrane protein (DUF943)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   1.5e-06     0.028      43      88 ..      57     100 ..      23     116 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.5e-06
      DUF943  43 ssilVenlpltdkgkIkWwlenkselkekYkipksasdglysitiw 88 
                 +   +++l + d + I+W++ n  +l +  +ip++++ g++++++ 
  KHJ30124.1  57 N--FIRQLNMVDVNLIEWYESNFLKLLNPIEIPTHNRGGTLELAFC 100
                 4..67899*******************************9998874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 986.26
//
Query:       KHJ30125.1  [L=333]
Description: putative fe-s cluster assembly protein dre2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-40  136.5   2.1    7.4e-40  135.5   2.1    1.5  1  CIAPIN1   Cytokine-induced anti-apoptosis inhibitor 1, Fe-S b
    8.9e-35  119.8   0.0    1.3e-34  119.2   0.0    1.2  1  DRE2_N    Fe-S cluster assembly protein DRE2 N-terminus


Domain annotation for each model (and alignments):
>> CIAPIN1  Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.5   2.1   8.2e-44   7.4e-40       4     100 .]     231     326 ..     228     326 .. 0.96

  Alignments for each domain:
  == domain 1  score: 135.5 bits;  conditional E-value: 8.2e-44
     CIAPIN1   4 kpeeCekkakkrrkackdctCGlkeleeeeekkkraaadkalekkvkleeeelaevdftvegktssCgsCaLGDafrCsgCPylGlPafkpGekvel 100
                  p +C+++a krr+ackdctCGl+++ ++e++++ +aad++l+  +kle++elaevdft++gk +sCg+C+LGDafrC +CPy+G+PafkpGe+v+l
  KHJ30125.1 231 IPLKCAPRAGKRRRACKDCTCGLAQKLAAEDAARISAADAQLRV-LKLETDELAEVDFTIQGKVGSCGNCSLGDAFRCVSCPYIGMPAFKPGEEVRL 326
                 5779*****************************99****99986.9************************************************986 PP

>> DRE2_N  Fe-S cluster assembly protein DRE2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.2   0.0   1.5e-38   1.3e-34       2     131 .]      20     151 ..      19     151 .. 0.93

  Alignments for each domain:
  == domain 1  score: 119.2 bits;  conditional E-value: 1.5e-38
                 EEEEEE-HHHHTSHHHHHHHHHHHHTTEEEEEEEHHHHHHT-----SSS--SEEEE---.....SS-S----HHHHHHHHTT--TT--EE---H..... CS
      DRE2_N   2 rtLLLapPsvathpekleaikklydsrsstdlqmlDRlaaglvsLpastYdlvllltde...eeeeeelliprkliqkivkaLkpgGklkgqdgkake. 96 
                 rtLLLapPs+a+h+e l+++++ +d r+ tdlqmlDRl++g+ +Lp+stYdl+l+l+d+   ++e+ + l+ r+ +q+i +aLk+gG++++qd+++++ 
  KHJ30125.1  20 RTLLLAPPSIAAHEESLRNVLSCFD-RAVTDLQMLDRLSTGIAKLPQSTYDLILILNDAngtSSESLQYLN-RNNFQQISNALKAGGRVEAQDKTLGQd 116
                 8************************.*********************************987555445555.9*********************99989 PP

                 ...HHHHHHHHHTEEEE-SSS..EEE-XXXXXXXXXXX CS
      DRE2_N  97 ...aqkleallaGlvieeeekgelvKpeqeeeeavpLk 131
                    ++ +ea+laGl+ +   +g++vKp+++ + +vp+k
  KHJ30125.1 117 hnsTEFREAILAGLILD---EGGMVKPKYSPSDTVPIK 151
                 999999**********5...778******99****997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2644.50
//
Query:       KHJ30126.1  [L=1462]
Description: putative dedicator of cytokinesis domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.3e-97  324.5   0.9    1.3e-96  323.8   0.9    1.3  1  DOCK_N        DOCK N-terminus
    6.1e-35  120.8   0.0    1.4e-34  119.7   0.0    1.7  1  DOCK-C2       C2 domain in Dock180 and Zizimin proteins
    1.2e-07   31.2   0.1      5e-07   29.2   0.0    2.1  2  SH3_1         SH3 domain
     0.0001   22.1   0.1    0.00055   19.8   0.0    2.2  2  SH3_9         Variant SH3 domain
     0.0081   15.8   0.0      0.051   13.3   0.0    2.4  2  SH3_2         Variant SH3 domain
  ------ inclusion threshold ------
       0.17   11.3   1.4       0.47    9.9   0.1    2.3  2  Chordopox_G2  Chordopoxvirus protein G2


Domain annotation for each model (and alignments):
>> DOCK_N  DOCK N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  323.8   0.9  4.5e-100   1.3e-96       1     377 []     170     589 ..     170     589 .. 0.87

  Alignments for each domain:
  == domain 1  score: 323.8 bits;  conditional E-value: 4.5e-100
      DOCK_N   1 pslkigdetvvsaeeplvdEiascLREWhsl.lkelllkrkyelfdklsklieeLdlaRrqlLsgvltadelkelrektvwrLvrgNkllglDviVRdp 98 
                 p+lkigdet+++ e+plvdEiascLREW+s+ l++lll+++y+++dk+ +l+++Ld aR+qlL+g lt++el +l+ek+vw+LvrgNk++ ++viVRdp
  KHJ30126.1 170 PMLKIGDETPTCIEQPLVDEIASCLREWQSThLHRLLLAEDYQSLDKMASLVRNLDAARKQLLYGFLTKNELIKLQEKVVWDLVRGNKMFAGEVIVRDP 268
                 8************************************************************************************************** PP

      DOCK_N  99 egrgrvdtdedSvvelyklqsemalldespkikeeksrsekseseaaslhhllldlksfvgaslgeeaelffsLydkke...skflsEnflvrlnksgl 194
                 ++rgr++t +dS++++++lqs m+llde+p+ ++         +e+ +++hll+++ksfvg+s++ +++l++ L++k+     + lsEn++++++ + +
  KHJ30126.1 269 SERGRILTADDSIIDVTQLQSIMSLLDEKPQLNV---------QEKPKFYHLLVEVKSFVGTSTE-NTTLVIFLASKAAdqpYEVLSENYIIEVPPTRA 357
                 **********************************.........99999*************7777.***********99666679************** PP

      DOCK_N 195 pkelaksleklrtLFtDLsskDlgd...areklyLVvkivrngrv................................................smelks 242
                 +++lak +e lrtLF+DL+ +D g+   a+++lyLVvk    +++                                                      
  KHJ30126.1 358 LASLAK-TEILRTLFVDLTGADFGElntAKNDLYLVVKAQGKQHIseslpkekrfsrdgppferltpqtsntigmsglkslilagkvqrntisR----- 450
                 ******.68******************************9999989999999999999999999999999999999999666555555544431..... PP

      DOCK_N 243 kkkrsassrsesaskk....seekeessets...................esssakkektvrRpfGvavldlsdlkglkqsdeekehvlkiyvp...en 315
                          +  ++ k    s         +                     + ++++++v ++  +++ +++d+  +++ +ee e v+++++p     
  KHJ30126.1 451 ---------HLPSTPKsfrsS---------ElrrslsksrdgslksfktsFYNVNETSQSVHKATRIGAFKINDI--IDR-QEEYELVMNMWAPapeYR 528
                 .........322222222111.........011112233444555555555666677777999************..777.9************66545 PP

      DOCK_N 316 esdfdqlhediiksrtkkyekspraeglqVsLklf.hgdleqlrkenptllrgvaltrKlGFp 377
                 es   +l+e i +s  +++e+s+r+e+lq+++k+f h + e+l+++ ptll++v++t+ +GF+
  KHJ30126.1 529 ESIVVDLEEVIRES--NNFENSERTERLQLNIKPFnHLNSEALIEASPTLLSNVVITKMMGFS 589
                 55555666555554..4468******************************************8 PP

>> DOCK-C2  C2 domain in Dock180 and Zizimin proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.7   0.0   4.6e-38   1.4e-34       1     194 [.     592     790 ..     592     791 .. 0.86

  Alignments for each domain:
  == domain 1  score: 119.7 bits;  conditional E-value: 4.6e-38
     DOCK-C2   1 pgdvrNdlYvtlksgefss.....kgskssa................kniqvtvevrdsdgerlekaiylgsgeelvsefrsvvlyhnkqptfneeiKi 78 
                 p+ +r+d+Y+t++++ +++     +     a                 n+ vt+e+r+++gerle++i+++s++e++s+++s+ + + ++  + +++++
  KHJ30126.1 592 PMRPRSDIYITIDEAFLPRqpflsR-----AigntgsfislpqnicgLNLKVTLELRNNNGERLEDCIFSSSNSEPQSTWESIAVARGDS--WKQTLRL 683
                 7899*************87555540.....25555666777777777**********************99****************999..******* PP

     DOCK-C2  79 alpieltekhHLlFtfrhvsceekkkekdkeeeekpfgyaflpLlkedgraflkdgehelpvy.....k...k.elppsgYlslpssrtssseeqkgps 168
                 a+p ++++++HL++t+ +v+               pf++++lpL++  ++af+ +g+h+l++y     k   k + ++  Yls p+ ++++ +   +++
  KHJ30126.1 684 AIPESDVPTSHLFITITDVPY-------------GPFAVCYLPLWE--QQAFILNGHHSLLLYayseiKkitKrNQNKVEYLSRPWDSKEKYKVG-KDE 766
                 ********************7.............59*********7..88999**********7765526874455567******9977766666.555 PP

     DOCK-C2 169 ekwldnskdtfkvrtklcSTiltqde 194
                 +k  +++ +t++v+t+lcST++ q++
  KHJ30126.1 767 VK--TGQIATLSVKTNLCSTLFLQNR 790
                 55..79******************96 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   1.7e-10     5e-07       1      35 [.      13      49 ..      13      53 .. 0.95
   2 ?   -1.9   0.0       0.9   2.7e+03       8      26 ..     376     394 ..     373     398 .. 0.80

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 1.7e-10
                EESSSBEXSSTTBXEBSTTEEEEEEEECSS..SEEEE CS
       SH3_1  1 iAlYDYeaeesdELsfkkGDviivleksed..gWwkg 35
                +A+Y+++a+++ +L+++ GD++ ++e+s +  +W++g
  KHJ30126.1 13 VAIYPFTAQDPADLPLELGDELYIIEQSGKdgEWYRG 49
                7***************************9999***99 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.9
                 XSSTTBXEBSTTEEEEEEE CS
       SH3_1   8 aeesdELsfkkGDviivle 26 
                 + + +EL+  k+D + v++
  KHJ30126.1 376 GADFGELNTAKNDLYLVVK 394
                 55668**********9987 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   1.8e-07   0.00055       1      35 [.      14      50 ..      14      61 .. 0.90
   2 ?   -1.4   0.0      0.72   2.2e+03      41      49 .]      76      84 ..      75      84 .. 0.90

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 1.8e-07
       SH3_9  1 AlypyepreddeLsLqrGDvitviee..sedgWlegs 35
                A+yp+++++++ L+L+ GD +++ie+   ++ W++g 
  KHJ30126.1 14 AIYPFTAQDPADLPLELGDELYIIEQsgKDGEWYRGY 50
                89**********************884569****997 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.72
       SH3_9 41 GlvPanyve 49
                G +P+++ve
  KHJ30126.1 76 GIFPRSCVE 84
                99******7 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   1.7e-05     0.051       2      56 ..      12      85 ..      11      86 .. 0.84
   2 ?   -1.9   0.0       0.9   2.7e+03      18      27 ..     236     245 ..     220     258 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.7e-05
                EEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE.C............CCE.......EEEEGCGEEE CS
       SH3_2  2 vraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev.g............Grv.......GlfPsslvee 56
                ++ai  ++++d+  L ++ Gd ++++   s ++++w++g+               G+        G+fP+s+ve+
  KHJ30126.1 12 AVAIYPFTAQDPADLPLELGDELYII-EQSGKDGEWYRGYLlAppsllvglttskGQTlearvfsGIFPRSCVEI 85
                67777899******************.3334666*******75899999999999666777778*********96 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.9
                 B-TTEEEEEE CS
       SH3_2  18 fkkGdvikvl 27 
                 ++k+++ik++
  KHJ30126.1 236 LTKNELIKLQ 245
                 89******99 PP

>> Chordopox_G2  Chordopoxvirus protein G2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00016      0.47       8      54 ..     199     245 ..     193     253 .. 0.87
   2 ?   -1.3   0.2      0.42   1.3e+03     161     197 ..    1335    1375 ..    1327    1380 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00016
  Chordopox_G2   8 lfhlakflltedeeslkqvvslCrgfnvdleellaeflnkkklkkis 54 
                   + hl + ll+ed +sl +++sl r ++  +++ll  fl+k +l k+ 
    KHJ30126.1 199 STHLHRLLLAEDYQSLDKMASLVRNLDAARKQLLYGFLTKNELIKLQ 245
                   669**********************************9998876664 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.42
  Chordopox_G2  161 ylvakivsNkdievvVte..kCidellkee..naellkkvf 197 
                     +v++   N+di ++ te  +C+d++ +++   +++l+k+f
    KHJ30126.1 1335 IIVSEWNLNEDISIIQTEmiECLDRIFRSKriTETILQKLF 1375
                    56666778999****99966699999985411344555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1462 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       547  (0.0305092); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.86u 0.27s 00:00:01.12 Elapsed: 00:00:00.45
# Mc/sec: 9810.98
//
Query:       KHJ30127.1  [L=320]
Description: hypothetical protein EV44_g0252 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-28   98.2   0.3    9.5e-28   97.5   0.0    1.4  2  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0      0.29   5.2e+03     174     198 ..      33      57 ..      31      60 .. 0.80
   2 !   97.5   0.0   5.3e-32   9.5e-28      18     136 ..      72     190 ..      64     202 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.29
       RVT_2 174 gsdikiledvkkelakkfklkdlgk 198
                 ++++k l+ +k+ +++k kl+ l  
  KHJ30127.1  33 ATEVKTLNSYKEVIQSKQKLQWLQA 57 
                 6788999999999999999987765 PP

  == domain 2  score: 97.5 bits;  conditional E-value: 5.3e-32
       RVT_2  18 rWvftkkkddl.kevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaaeeelvvhqldvdsafLnaeldee.vyvkqPpGfeidreeekvyk 114
                  Wvf++k  +    v++kar   +G++q+ g+dyde++a v +  +++ l+a+ a+++l   + d  +afL ae++++ ++v qP Gfe     ++++ 
  KHJ30127.1  72 SWVFKLKLGADgMPVRFKARWDLKGYTQQKGIDYDETYAAVTKATTLKCLMAMIAHYDLEAKKYDKMTAFLYAEIKDHeIFVEQPHGFEKT--GDNICL 168
                 7******9887799*************************************************************7655*********988..899*** PP

       RVT_2 115 LnkslyGlkqapllWnekidkv 136
                 L+k+lyGlkq+pllW+e+++++
  KHJ30127.1 169 LKKALYGLKQSPLLWFEELTSI 190
                 *****************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       867  (0.0483574); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.29s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2248.52
//
Query:       KHJ30128.1  [L=494]
Description: hypothetical protein EV44_g3196 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-21   77.5   0.1    2.2e-21   76.4   0.1    1.4  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
       0.19   11.2   0.1       0.53    9.8   0.1    1.8  1  INSC_LBD  Inscuteable LGN-binding domain


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.4   0.1   2.5e-25   2.2e-21      14     197 ..     318     451 ..     315     455 .. 0.94

  Alignments for each domain:
  == domain 1  score: 76.4 bits;  conditional E-value: 2.5e-25
                 ....-THHHHCTB--.........-------HHHH.............HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET.............. CS
       RVT_1  14 llsvdykalnkliakrLkdvlekllsenqpgfrpgrstldavedllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvptklinliksflstr 112
                 + +vdy+ ln++++          + +++p f++              l++  ka++l+klD+k aF++++ +e ++ +taf+++              
  KHJ30128.1 318 IFCVDYRGLNAITIP---------DRYPLPLFKET-------------LRQLSKARWLTKLDVKTAFHKIRIREGDEWMTAFRCR-------------- 380
                 5689***********.........***********.............9999*********************************.............. PP

                 ...........TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHH.HHHHHHHHHHHHHHTT-- CS
       RVT_1 113 sfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskee.lqelleaveewlkesglk 197
                              ++e+ ++ +G++++P++f++++n+ lre       ++  +Y+DDil++++++ee + + ++++ +++k++gl 
  KHJ30128.1 381 -----------LLLFEWLVTLFGLINAPATFQRYINQQLREHLD----LNAKAYMDDILVYTDNEEEhHWKTVRSILTKIKNAGLF 451
                 ...........679***********************9999998....8***************5555**************9985 PP

>> INSC_LBD  Inscuteable LGN-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1     6e-05      0.53       1      16 [.     205     220 ..     205     222 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 6e-05
    INSC_LBD   1 iqvDSVqRWmeDLklm 16 
                 i + SVq+W +DL++ 
  KHJ30128.1 205 ISISSVQKWRNDLRHV 220
                 6799**********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       857  (0.0477997); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.30s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 3226.70
//
Query:       KHJ30129.1  [L=468]
Description: putative secretory pathway rab gdp dissociation inhibitor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   4.1e-188  625.3   0.0   4.6e-188  625.1   0.0    1.0  1  GDI            GDP dissociation inhibitor
     0.0067   17.0   0.1       0.35   11.5   0.1    2.4  2  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
       0.02   15.1   0.0      0.053   13.8   0.0    1.7  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain


Domain annotation for each model (and alignments):
>> GDI  GDP dissociation inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  625.1   0.0  7.7e-192  4.6e-188       4     432 ..       7     455 ..       1     459 [. 0.94

  Alignments for each domain:
  == domain 1  score: 625.1 bits;  conditional E-value: 7.7e-192
                 EECEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSSCGGG-EE-HHHHHHHH-TT...HHHHHHH--GGG--EESS--BEETTSHHHHHHHHTTGGGCS CS
         GDI   4 eydvivlGtGlkecilsGllsvdgkkvlhldrndyyGgesasltleqlyerfkle...ekpeeklGkdrdwnvdlipkfllanGelvkiliktdvtryl 99 
                 eydv+vlGtGl+ec+lsG+lsv+gkkvlh+drnd+yGge+asl++e l++++ +    e+p +k+G+  dwn+dlipk+l+++Gel++il+ tdvtryl
  KHJ30129.1   7 EYDVVVLGTGLTECVLSGVLSVKGKKVLHIDRNDHYGGEAASLNIESLFKKYGNFnpgEEPWKKYGRVNDWNIDLIPKLLMSSGELTNILVSTDVTRYL 105
                 8***********************************************99875543449999************************************* PP

                 -EEE-SEEEEEE....TCEEEE--SSHHHHHC-TTS-HHHHHHHHHHHHHHHH-BTTBGGGSTT--TTTSBHHHHHHHCT--HHHHHHHHHHTS--SSS CS
         GDI 100 efkaveGsyvyk....egkiakvpanelealaspllglfekrrakkfleyvseyeeddpktyedldlkkatmkevykkfdlsedtkdfiGhalalyrdd 194
                 efk+v+Gs+v +    +  +akvp++  eal s+l+g+fekrr+k f+e++  ++ ddp  +++l++++ tmk+vy+kf+l+ +t+dfiGha+al+++d
  KHJ30129.1 106 EFKQVAGSFVQQgsgsKATVAKVPSDAGEALRSSLMGIFEKRRMKTFIEWIGTFNLDDPACHKGLNIRNCTMKDVYDKFGLEASTRDFIGHAMALHLTD 204
                 ***********98888899******************************************************************************** PP

                 GGGGSB..CHHHHHHHHHHHHHHCCCSS-SEEEETT-TTHHHHHHHHHHHHTT-EEETS--ECEEEE-TTS-EEEEEETTE..........EEEECEEE CS
         GDI 195 dylkqp..aletleriklyaeslarygkspylyplyGlGelpqgfarlsaiyGGtymlnkpvdevvldedgkvvGvkseee..........vakakkvi 281
                 +yl++   a et+eri+ly +s+arygkspy+yplyGlGelpqgfarlsaiyGGtymln+++devv+ e +kv G+k+  +           +k+kk+i
  KHJ30129.1 205 SYLNEVgrAPETIERIRLYGNSVARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTKIDEVVY-EGDKVAGIKATMQdrsdeppmkfETKTKKII 302
                 ****9633679********************************************************.889*****9743212222333323689**** PP

                 E-GGG-CCCEEEEEEEEEEEEEESS--TTSTT-SSEEEEE-GGGCTSSS-EEEEEEEGGGTSS-TT-EEEEEEEE--SS.-HHHHTHHHHHTT-SECEE CS
         GDI 282 cdpsylpekvrkvgkviraicilshpipntddadsvqiiipqkqlgrksdiyvalvssahnvaakgkylaivsttvete.npevelepalellgpieek 379
                 +dpsy+p+kv+ +g+v+raicilsh ++ td++ds q+iipq+q+grk+diy+a+vssah v++kg+y+aivst+ et+ n + elep++e lg ieek
  KHJ30129.1 303 ADPSYFPGKVKVTGHVLRAICILSHSLAGTDNSDSAQLIIPQSQVGRKNDIYIAVVSSAHSVCPKGYYIAIVSTIAETStNHHLELEPGFERLGKIEEK 401
                 *****************************************************************************9736789*************** PP

                 EEEE.EEEEEESSSSTTTSEEE-----S-SBSHHHHHHHHHHHHHHHSS----- CS
         GDI 380 fvki.sdlyepvedgskdnifisksydatshfettvedvkdiykrltGkkldlk 432
                 f+     ly p+edgskd ifisksydatshfett++dv+diy+r  G++l+++
  KHJ30129.1 402 FMGPpIPLYAPIEDGSKDSIFISKSYDATSHFETTTDDVRDIYQRAEGHELVVE 455
                 **85268*******************************************9986 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.1   5.8e-05      0.35       2      51 ..      10      56 ..       9      60 .. 0.83
   2 ?    2.9   0.0     0.028   1.7e+02      56      78 ..     259     281 ..     251     288 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 5.8e-05
                EEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHH CS
   Pyr_redox  2 vvvvGgGyiglElAgalaelgkkVtvversdkllrllDeeaskilqekle 51
                vvv+G G++ + l g+l+  gkkV  ++r+d+     +e+as +++  ++
  KHJ30129.1 10 VVVLGTGLTECVLSGVLSVKGKKVLHIDRNDHYG---GEAASLNIESLFK 56
                8******************************998...5555555555444 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.028
                 EEECSEEEEEEEEETTSEEEEEE CS
   Pyr_redox  56 evllntkveeiegsedgvesvkl 78 
                 + +lntk+ e++ ++d+v ++k 
  KHJ30129.1 259 TYMLNTKIDEVVYEGDKVAGIKA 281
                 6799*************999987 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   8.8e-06     0.053       1      40 [.      12      51 ..      12      64 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 8.8e-06
                   EE--SHHHHHHHHHHHCCTEEEEEE-SSSSSSGGG-EECE CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagfdvlllekrdrlGGraasyev 40
                   ++G+Gl+ +v+   L+ +g++vl ++++d+ GG aas ++
     KHJ30129.1 12 VLGTGLTECVLSGVLSVKGKKVLHIDRNDHYGGEAASLNI 51
                   79**********************************9766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3396.49
//
Query:       KHJ30130.1  [L=256]
Description: putative 50s ribosomal protein l4 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-20   71.8   0.2    6.1e-20   71.1   0.2    1.4  1  MRP-L47   Mitochondrial 39-S ribosomal protein L47 (MRP-L47)
  ------ inclusion threshold ------
       0.44   10.0   1.1       0.74    9.2   1.1    1.3  1  Clc-like  Clc-like


Domain annotation for each model (and alignments):
>> MRP-L47  Mitochondrial 39-S ribosomal protein L47 (MRP-L47)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   0.2   6.8e-24   6.1e-20       1      87 []     106     197 ..     106     197 .. 0.92

  Alignments for each domain:
  == domain 1  score: 71.1 bits;  conditional E-value: 6.8e-24
     MRP-L47   1 Leeffddkkdl..kseeevkvgraWaaeeLrkksfedLhklwyvllkekNmLlteeeellrkqek...mpsperlkkvkesMeniktVlkeR 87 
                 L+ ff+ k++    +ee+  +gr+W++eeLr ks+edLh lw+v+ ke+N + t  +e +r +      +s+er k+v+++  +ik+Vl+eR
  KHJ30130.1 106 LWGFFHSKEKAinTPEEDFAFGRSWTVEELRGKSWEDLHTLWWVCAKENNRIATASYERRRIKAGygdAESQERDKAVRRTQRAIKQVLTER 197
                 7999999554447899999***********************************999999888888889**********************9 PP

>> Clc-like  Clc-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.1   8.3e-05      0.74      25     105 ..     128     203 ..     124     206 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 8.3e-05
    Clc-like  25 PsWqvvdireiraivqsGLWldCtraekhvvksqdvdegplhCvYkFdidallvyseklevidedsavgelethkFygWhk 105
                  sW v ++r    +  + LW+ C ++++ +  + +++   ++  Y    +++     +  v + + a +++ t ++y+W +
  KHJ30130.1 128 RSWTVEELRGKSWEDLHTLWWVCAKENNRIA-TASYERRRIKAGYGDAESQER----DKAVRRTQRAIKQVLTERWYSWTE 203
                 59********99999*********8888654.455666678887765544422....223556777788888888888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       564  (0.0314574); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1897.07
//
Query:       KHJ30131.1  [L=919]
Description: putative heat shock protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.5e-48  162.5   0.3    1.1e-46  159.1   0.0    3.0  2  AAA_2            AAA domain (Cdc48 subfamily)
    3.6e-32  110.4   2.8    3.6e-32  110.4   2.8    3.1  2  AAA_lid_9        AAA lid domain
      8e-26   91.0   0.2    6.7e-13   49.2   0.0    3.3  2  AAA              ATPase family associated with various cellul
    2.3e-23   82.0   0.1    1.4e-22   79.5   0.0    2.5  1  ClpB_D2-small    C-terminal, D2-small domain, of ClpB protein
    1.2e-15   57.7   0.0    9.1e-11   41.9   0.0    2.9  2  AAA_5            AAA domain (dynein-related subfamily)
    2.3e-13   50.6   0.2    3.7e-05   24.0   0.0    4.8  3  AAA_22           AAA domain
    1.1e-10   41.5   2.6    5.3e-05   23.3   0.2    4.1  3  Clp_N            Clp amino terminal domain, pathogenicity isl
    9.6e-10   39.1  11.5    6.3e-05   23.4   0.1    5.3  4  AAA_16           AAA ATPase domain
    9.3e-08   32.0   0.0    1.6e-05   24.7   0.0    2.7  2  Sigma54_activat  Sigma-54 interaction domain
    3.3e-06   26.9   0.0      0.025   14.3   0.0    2.6  2  IstB_IS21        IstB-like ATP binding protein
    7.3e-06   26.2   0.0      0.045   13.9   0.0    3.1  2  AAA_33           AAA domain
    7.7e-06   25.5   0.0      0.013   15.0   0.0    2.7  2  AAA_7            P-loop containing dynein motor region
    1.1e-05   26.0   0.4       0.27   11.8   0.0    3.6  2  AAA_18           AAA domain
    8.2e-05   22.4   1.5        1.4    8.6   0.0    4.6  5  AAA_30           AAA domain
    0.00017   21.0   0.1       0.16   11.3   0.1    3.4  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    0.00023   21.5   0.0       0.53   10.7   0.0    2.7  2  RNA_helicase     RNA helicase
    0.00024   21.1   0.0       0.34   11.0   0.0    3.6  3  AAA_14           AAA domain
     0.0003   21.1   0.3       0.88    9.9   0.0    4.2  3  AAA_19           AAA domain
    0.00034   20.9   1.1        1.4    9.2   0.0    3.6  3  AAA_28           AAA domain
    0.00037   21.0   0.2        0.6   10.6   0.0    3.8  3  ABC_tran         ABC transporter
    0.00051   20.0   0.0        2.4    8.1   0.0    3.2  2  RsgA_GTPase      RsgA GTPase
    0.00096   19.2   0.0       0.68    9.9   0.0    3.8  3  ResIII           Type III restriction enzyme, res subunit
      0.001   18.8   0.0        1.4    8.6   0.0    2.7  2  AAA_24           AAA domain
     0.0011   18.1   0.0       0.02   13.9   0.0    2.6  2  T2SSE            Type II/IV secretion system protein
     0.0013   18.6   0.2        1.6    8.6   0.0    3.7  3  AAA_3            ATPase family associated with various cellul
     0.0016   18.2   0.0        1.4    8.8   0.0    2.7  2  AAA_29           P-loop containing region of AAA domain
     0.0025   17.4   0.3       0.41   10.2   0.0    3.0  2  AAA_25           AAA domain
     0.0036   17.2   6.8        1.9    8.3   0.1    5.2  5  ATPase_2         ATPase domain predominantly from Archaea
     0.0037   17.3   0.0        3.7    7.6   0.0    2.5  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
     0.0042   17.1   9.2      0.016   15.3   9.2    2.1  1  Cep57_CLD_2      Centrosome localisation domain of PPC89
     0.0084   16.0   0.0       0.49   10.3   0.0    2.6  2  NACHT            NACHT domain
      0.009   15.3   0.2        0.5    9.6   0.0    2.9  3  Zeta_toxin       Zeta toxin
  ------ inclusion threshold ------
      0.011   15.9   0.0        5.8    7.2   0.0    2.8  2  Roc              Ras of Complex, Roc, domain of DAPkinase
      0.028   14.1   0.9        6.3    6.4   0.0    3.3  4  SRP54            SRP54-type protein, GTPase domain
       0.03   14.2   0.0        6.1    6.7   0.0    2.7  2  Rad17            Rad17 P-loop domain
      0.034   13.6   0.0        1.8    8.0   0.0    3.1  2  PhoH             PhoH-like protein
      0.036   14.2   0.0      0.098   12.8   0.0    1.7  1  Torsin           Torsin
        0.2   10.5  10.2       0.46    9.3  10.2    1.5  1  Spc7             Spc7 kinetochore protein
       0.24   11.9   0.0       0.24   11.9   0.0    4.7  3  AAA_23           AAA domain
        1.7    8.5  12.3        5.9    6.8  12.3    1.9  1  DASH_Spc19       Spc19


Domain annotation for each model (and alignments):
>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       6.6     3e+03       6      24 ..     215     233 ..     210     253 .. 0.82
   2 !  159.1   0.0   2.5e-49   1.1e-46       5     170 ..     626     787 ..     622     788 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 6.6
                 EEEE--TTSSHHHHHHHHH CS
       AAA_2   6 illlgptgvGktelakala 24 
                   l+g+ gvGkt + + la
  KHJ30131.1 215 PVLIGEPGVGKTTVVEGLA 233
                 5689999******988876 PP

  == domain 2  score: 159.1 bits;  conditional E-value: 2.5e-49
                 -EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS............EEEEETGGG------------ CS
       AAA_2   5 silllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG............ivllDEidKihpkessgadvS 91 
                 s+l++gp+g+Gkt+l+kalae+lf ++ k++ir+d+se++e    +h+vsr igappgyvg++ gG            i+l+DE++K+++         
  KHJ30131.1 626 SFLFCGPSGTGKTLLTKALAEFLF-DDPKAMIRLDMSEYQE----RHTVSRMIGAPPGYVGHDAGGqltealrrkpfsIILFDEVEKAAK--------- 710
                 89**********************.****************....*********************************************......... PP

                 -HHHHHHHHHHHH--EE-------EE-TT-EEEEEE--TTHHHHTTTS-STTTTSGGG--HHHHHHTT--HHHHTT--E CS
       AAA_2  92 regVqrdLLqileggtltdkqgrkvdtknilfImtgafgsskisdesrskeeeeekkkeeveeelkkglipEllgRlpe 170
                   +V+++LLq++++g++td qgr vd +n++++mt+++g++  ++  +++ + ++++k+ v+++++ ++ pE+l+R+  
  KHJ30131.1 711 --EVLTILLQLMDDGRITDGQGRVVDARNCIVVMTSNIGAQFLQRPMTKQGKIDDTTKSLVRKAIEDYFLPEFLNRISA 787
                 ..*******************************************99999**************************975 PP

>> AAA_lid_9  AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.4   2.8   7.9e-35   3.6e-32       1     103 [.     356     458 ..     356     460 .. 0.97
   2 ?   -0.0   0.2       1.9   8.3e+02      65     100 ..     480     515 ..     469     519 .. 0.80

  Alignments for each domain:
  == domain 1  score: 110.4 bits;  conditional E-value: 7.9e-35
   AAA_lid_9   1 seeetieiLrglkekyekhHgvkisdealeaavklSkrYisdrflPdkAIDllDeaaarvrlkkeskpeeleklekelaklekekealekeeekekaer 99 
                 s++eti+iLrglk+kye +Hg++isd a+++a++l++rY+++r+lPd+A+Dl+Deaaa+vr+++es pe l+kl+++ ++l+ e +al++e+++++++r
  KHJ30131.1 356 SVSETISILRGLKDKYEVYHGITISDGAIVSAATLAARYLTQRRLPDSAVDLIDEAAAAVRTERESLPEALDKLNRKSQQLKIEIHALSREKDEASKTR 454
                 5789*******************************************************************************************9999 PP

   AAA_lid_9 100 lkel 103
                 l+++
  KHJ30131.1 455 LAQA 458
                 9875 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 1.9
   AAA_lid_9  65 eskpeeleklekelaklekekealekeeekekaerl 100
                 +++ + +++++ +l++l+ +k+ +++  ++++a++l
  KHJ30131.1 480 RARGKAIQEAKIKLEQLKVKKDDATRIGDDARAADL 515
                 456678999999999999999999998888777766 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.2   0.0   1.5e-15   6.7e-13       2     112 ..     216     334 ..     215     354 .. 0.77
   2 !   38.1   0.0   4.1e-12   1.8e-09       2     125 ..     628     762 ..     627     767 .. 0.82

  Alignments for each domain:
  == domain 1  score: 49.2 bits;  conditional E-value: 1.5e-15
                 EEESSTTSSHHHHHHHHHHHH..........THEEEEEETTTCS..SSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHH CS
         AAA   2 llyGppGtGKTllakavakel..........gvefleisgsell..skyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnq 88 
                 +l+G pG+GKT++++ +a  +            ++l++++ +l+  sky ge e+++++l+ke++ +++  +lf+DE++ l+++   s+ e +++++n 
  KHJ30131.1 216 VLIGEPGVGKTTVVEGLALRIvnndvpdnlaACKLLSLDVGSLVagSKYRGEFEERLKGLLKEVEDSKEFIVLFVDEMHLLMGAG--SSGEGGMDAANL 312
                 599****************965444443333588*********99899****************999855**************9..667777788887 PP

                 HHHHHHHTTTSSSTEEEEEEESS...G CS
         AAA  89 Llteldgvkkkeskvivigatnr...p 112
                 L ++l + +       +igat+     
  KHJ30131.1 313 LKPMLARGQL-----HCIGATTLseyR 334
                 7777777766.....699999875532 PP

  == domain 2  score: 38.1 bits;  conditional E-value: 4.1e-12
                 EEESSTTSSHHHHHHHHHHHH...THEEEEEETTTCSSS............STTHHHH.HHHHHHHHHHHTSTS.EEEEEETGGGHHHHHTTCCCHHHH CS
         AAA   2 llyGppGtGKTllakavakel...gvefleisgsellsk............yvgesek.kirelfkeakekakp.silfiDEidalaksrsgseseeee 83 
                 l++Gp GtGKTll ka+a+ l      ++++++se  +             yvg+ +  ++ e +++   k  p si+++DE+++ ak+          
  KHJ30131.1 628 LFCGPSGTGKTLLTKALAEFLfddPKAMIRLDMSEYQERhtvsrmigappgYVGHDAGgQLTEALRR---K--PfSIILFDEVEKAAKEV--------- 712
                 89******************96543779999999999668999999999998887765145555533...3..77***********8888......... PP

                 HHHHHHHHHHHHTTTS........SSTEEEEEEESS.GGGSTHHHHS.TTSS CS
         AAA  84 rvvnqLlteldgvkkk........eskvivigatnr.pdkldpallr.gRfd 125
                   +  Ll+ +d+ +           +++iv++++n   + l++++ + g++d
  KHJ30131.1 713 --LTILLQLMDDGRITdgqgrvvdARNCIVVMTSNIgAQFLQRPMTKqGKID 762
                 ..************999******9888*******987777777777666665 PP

>> ClpB_D2-small  C-terminal, D2-small domain, of ClpB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.5   0.0   3.2e-25   1.4e-22       1      80 [.     794     875 ..     794     876 .. 0.95

  Alignments for each domain:
  == domain 1  score: 79.5 bits;  conditional E-value: 3.2e-25
                    SCHHHHHHHHHHHHHHHHHHSCT..TTEEEEEHHHHHHHHHHHTSBTTTBTCCHHHHHHHHTHHHHHHHHHTTSSSTTSEEE CS
  ClpB_D2-small   1 LtkeelkkIvdlalkklekrlke..rgvelevtdealdalaekgydpeyGARpLrriiqreiedplaeeilsgelkegdtvr 80 
                    L+k e++kIv+++l++++krl++  ++v++++t+e++++l ++gy p yGARpL r+i+ e++++la +il+g +++g+ ++
     KHJ30131.1 794 LSKGEIRKIVEIRLDEVQKRLSSngKDVRIDCTPEVKEWLGSAGYHPSYGARPLARLIESEVLNRLAVLILRGSIRDGEVAN 875
                    8999*****************766799**************************************************99876 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   0.00023      0.11       3      24 ..     216     238 ..     214     244 .. 0.86
   2 !   41.9   0.0     2e-13   9.1e-11       2     122 ..     627     746 ..     626     758 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00023
                 EEE--SSSSHHHHHHHGGGGB.S CS
       AAA_5   3 lLvGppGtgKselaerlaaal.n 24 
                 +L+G+pG+gK++++e la ++ n
  KHJ30131.1 216 VLIGEPGVGKTTVVEGLALRIvN 238
                 79*************99987754 PP

  == domain 2  score: 41.9 bits;  conditional E-value: 2e-13
                 EEEE--SSSSHHHHHHHGGGGB.S--EEEEE--TT.--HHHHH--B--...........--------..G-SEEEEESGGG--HHHHHHHHHHHHSSEE CS
       AAA_5   2 vlLvGppGtgKselaerlaaal.nreveyvqltrd.tteedlkgrreikngttslvd..splvraar..egeilvlDEveraesevlnsLlslleerrl 94 
                 +l  Gp+GtgK+ l++ la++l  ++  ++ l  + ++e++ + r+  ++ +++ +d  + l++a r    +i+++DEve+a +evl +Ll+l+++ r+
  KHJ30131.1 627 FLFCGPSGTGKTLLTKALAEFLfDDPKAMIRLDMSeYQERHTVSRMIGAPPGYVGHDagGQLTEALRrkPFSIILFDEVEKAAKEVLTILLQLMDDGRI 725
                 6889*******************88888888875415555555555555444444443389*****965569*************************** PP

                 E..-SSSEEE---......-EEEEEESS CS
       AAA_5  95 lleeggelvkaknddllerfrviatanp 122
                    +g+++v  +++       v++t+n 
  KHJ30131.1 726 T--DGQGRVVDARN-----CIVVMTSNI 746
                 *..99999998887.....899999986 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0     1e-05    0.0047       4     117 ..     211     318 ..     208     337 .. 0.65
   2 ?    1.4   0.1      0.79   3.5e+02      37     117 ..     339     430 ..     325     441 .. 0.62
   3 !   24.0   0.0   8.2e-08   3.7e-05       8     118 ..     627     722 ..     622     736 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 1e-05
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalraravielliiDEaqh 102
                 t++  v++Ge+G+GKTt+++ l+ + ++         +v    + ++   k l  ++ + +  ++ + +  +e+l  +l +  +++    +l +DE++ 
  KHJ30131.1 211 TKNNPVLIGEPGVGKTTVVEGLALRIVNN--------DV----PDNLAACKLLSLDVGSLVAGSKYR-GEFEERLKGLLKEVEDSKEF-IVLFVDEMHL 295
                 778889******************98632........21....222223344444555555555555.44455555666666666666.8888888888 PP

      AAA_22 103 lr....s....eealeeLrslln 117
                 l+    s    ++a + L+ +l 
  KHJ30131.1 296 LMgagsSgeggMDAANLLKPMLA 318
                 87776425666777777766655 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.79
      AAA_22  37 e.....erpevvfvtlpsstsskdllrellralglelka..erlsseellealeqalrarav..ielliiDEaqh.lr.seealeeLrslln 117
                 +     +r ++v+v+ ps ++  ++lr l  ++++ +    + +      ++ +++l +r+    ++ +iDEa   +r + e l e  + ln
  KHJ30131.1 339 KdaafeRRFQQVLVNEPSVSETISILRGLKDKYEVYHGItiSDGAIVSAATLAARYLTQRRLpdSAVDLIDEAAAaVRtERESLPEALDKLN 430
                 12334578888999999999999999999999887665554333333333444555555555777889999999966563444444433334 PP

  == domain 3  score: 24.0 bits;  conditional E-value: 8.2e-08
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalraravielliiDEaqhlrse 106
                  + +G+sGtGKT+l + l+e l         +++ + + l  s+   + ++ + r +g +  +     ++   +l++alr++   ++++ DE+++   +
  KHJ30131.1 627 FLFCGPSGTGKTLLTKALAEFLF--------DDPKAMIRLDMSE--YQERHTVSRMIGAPPGY---VGHDAGGQLTEALRRKPF-SIILFDEVEKA-AK 710
                 678******************94........7776666655555..55678899999999999...999999************.**********9.9* PP

      AAA_22 107 ealeeLrsllnl 118
                 e+l+ L +l+++
  KHJ30131.1 711 EVLTILLQLMDD 722
                 ********9996 PP

>> Clp_N  Clp amino terminal domain, pathogenicity island component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.025        11       5      24 ..      23      42 ..      19      50 .. 0.86
   2 !    9.4   0.0    0.0025       1.1      26      51 ..      53      78 ..      51      79 .. 0.91
   3 !   23.3   0.2   1.2e-07   5.3e-05       1      52 [.     105     155 ..     105     156 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.025
                HHHTTCSSB-HHHHHHHHHH CS
       Clp_N  5 AkslghqyistEHLLlALle 24
                A  + h+++ + HL l+Ll+
  KHJ30131.1 23 AETNAHSQVQPLHLALSLLD 42
                66677*************98 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0025
                CTSHHHHHHHHTTSSHHHHHHHHHHH CS
       Clp_N 26 ddGlaarlLkkaGvdldalrkaiekl 51
                +++l+++++++a+++ +a+++a++k+
  KHJ30131.1 53 SQSLFRQVIERAHGNAQAIQRALNKA 78
                678********************986 PP

  == domain 3  score: 23.3 bits;  conditional E-value: 1.2e-07
                 HHHHHHHTTCSSB-HHHHHHHHHHSCTSHHHHHHHH.TTSSHHHHHHHHHHHH CS
       Clp_N   1 AqelAkslghqyistEHLLlALleeddGlaarlLkk.aGvdldalrkaiekll 52 
                 A+el+k  +++++ ++HL +AL e++  +++++Lk+   ++ + +++ai +++
  KHJ30131.1 105 AHELQKTQKDSFVAVDHLIIALTEDS--TIQQALKEgNIINTKVIHDAITQIR 155
                 99*******************99977..******8624456666666666666 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1         8   3.6e+03      96     125 ..      56      77 ..      12     129 .. 0.56
   2 !   23.4   0.1   1.4e-07   6.3e-05       2      49 ..     193     237 ..     192     322 .. 0.85
   3 !   15.3   0.0   4.5e-05      0.02      21      51 ..     621     651 ..     597     678 .. 0.74
   4 ?    2.7   0.0      0.33   1.5e+02     131     162 ..     693     723 ..     680     741 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 8
      AAA_16  96 awrekleealaavpelagaeasrllellkr 125
                  +r+ +e+a +         a+++ ++l++
  KHJ30131.1  56 LFRQVIERAHG--------NAQAIQRALNK 77 
                 22222222222........11222222222 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 1.4e-07
      AAA_16   2 lvGReeeleqLlsalervrsgrpelvllsGesGvGKsslvrellrale 49 
                 ++GR+ e++++ ++l+r  ++ p   +l+Ge+GvGK+++v+ l+ ++ 
  KHJ30131.1 193 VIGRDGEIRRVIRILSRRTKNNP---VLIGEPGVGKTTVVEGLALRIV 237
                 78*********999998887766...899***********87775554 PP

  == domain 3  score: 15.3 bits;  conditional E-value: 4.5e-05
      AAA_16  21 sgrpelvllsGesGvGKsslvrellralekd 51 
                  ++p++ l+ G+sG+GK+ l ++l++ l +d
  KHJ30131.1 621 PNQPPSFLFCGPSGTGKTLLTKALAEFLFDD 651
                 3455********************9877666 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.33
      AAA_16 131 srderplvlvlDdlqwadeaslqllaaLlrll 162
                 +r ++  ++++D++++a  + l++l +L++++
  KHJ30131.1 693 RR-KPFSIILFDEVEKAAKEVLTILLQLMDDG 723
                 33.44589****************99999874 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0      0.06        27       2      42 ..     194     232 ..     193     297 .. 0.74
   2 !   24.7   0.0   3.6e-08   1.6e-05      21     140 ..     623     742 ..     597     758 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.06
                      ---SHHHHHHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHH CS
  Sigma54_activat   2 igesealkelleqikkvaktdlsvlitGesGtGKellarai 42 
                      ig++ +++++++ +++ +k + +v + Ge G+GK+++ + +
       KHJ30131.1 194 IGRDGEIRRVIRILSRRTK-NNPV-LIGEPGVGKTTVVEGL 232
                      5666777777777666543.3345.56********998765 PP

  == domain 2  score: 24.7 bits;  conditional E-value: 3.6e-08
                      SSS-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS-TTCHHHHHHEBSSSSSTTTSS-BE..HHHHHTTTSEEEEETGGGS-HHHHHH CS
  Sigma54_activat  21 tdlsvlitGesGtGKellaraiheaskrkekpfvavncaaipeelleseLFGhekGaFtGAekekk..GlfekadgGtlfLDeigelplelQek 112
                      ++ s l  G sGtGK+ll +a+ e    + k ++++++++++e+   s++ G   G + G ++  +   ++++   +++++De+++   e+ + 
       KHJ30131.1 623 QPPSFLFCGPSGTGKTLLTKALAEFLFDDPKAMIRLDMSEYQERHTVSRMIGAPPG-YVGHDAGGQltEALRRKPFSIILFDEVEKAAKEVLTI 715
                      347899***********************************************999.66655443323667777789***************** PP

                      HHHHHHHSEEESBTSSSEEE--EEEEEE CS
  Sigma54_activat 113 LlrvlqegevervGsskeikvdvriiaa 140
                      Ll+++++g+++  G+ + +++   i++ 
       KHJ30131.1 716 LLQLMDDGRITD-GQGRVVDARNCIVVM 742
                      ********9986.554444444444443 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0    0.0015      0.66      45      75 ..     210     240 ..     199     295 .. 0.88
   2 !   14.3   0.0   5.5e-05     0.025       8      69 ..     582     646 ..     576     659 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0015
   IstB_IS21  45 ekkenivllGpsGvGKshlaialgveavrag 75 
                 ++k+n vl+G +GvGK+ +   l+ + v+++
  KHJ30131.1 210 RTKNNPVLIGEPGVGKTTVVEGLALRIVNND 240
                 578999**************99999988876 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 5.5e-05
   IstB_IS21   8 lrlaklpaqktledidfraarsldk..rkvk.eLatlsfiekkenivllGpsGvGKshlaialgv 69 
                  ++  l+++k+l++i   +++ +++   k++ + a+ls  ++  +++++GpsG+GK+ l+ al+ 
  KHJ30131.1 582 EKEKLLQMEKVLAKIVVGQKEAVQAvsDKIRlQRAGLSNPNQPPSFLFCGPSGTGKTLLTKALAE 646
                 5555566777776666555443332102222244677777788899*****************86 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0043       1.9       4      20 ..     217     233 ..     216     283 .. 0.88
   2 !   13.9   0.0    0.0001     0.045       3      39 ..     628     669 ..     627     721 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0043
      AAA_33   4 lvGlpGsGKstlaerll 20 
                 l+G pG+GK+t++e+l+
  KHJ30131.1 217 LIGEPGVGKTTVVEGLA 233
                 89************997 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 0.0001
      AAA_33   3 llvGlpGsGKstlaerllkklg.....avllssdtlrrrlfg 39 
                 l++G++G+GK+ l + l++ l      +++l+  ++ +r+++
  KHJ30131.1 628 LFCGPSGTGKTLLTKALAEFLFddpkaMIRLDMSEYQERHTV 669
                 89***************9877777788888888877777665 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0054       2.4      32      57 ..     211     237 ..     199     296 .. 0.81
   2 !   15.0   0.0     3e-05     0.013      35      82 ..     626     673 ..     607     676 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0054
       AAA_7  32 nkkpvllvGptGtGKtviikd.llkkl 57 
                  k++ +l+G+ G+GKt++++   l+ +
  KHJ30131.1 211 TKNNPVLIGEPGVGKTTVVEGlALRIV 237
                 45667899***********99555544 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 3e-05
       AAA_7  35 pvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdii 82 
                 ++l++Gp+GtGKt+++k l + l ++   ++ + +s + + +++ ++i
  KHJ30131.1 626 SFLFCGPSGTGKTLLTKALAEFLFDDPKAMIRLDMSEYQERHTVSRMI 673
                 68********************999*9**********99999999888 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   0.00061      0.27       3      44 ..     217     271 ..     216     289 .. 0.76
   2 !   10.2   0.0    0.0019      0.86       3      22 ..     629     648 ..     628     741 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00061
      AAA_18   3 ltGtpGvGKttlakeLskrl.gf............gvnlrdvakenglllevdpe 44 
                 l G pGvGKtt+ + L+ r  ++            +  ++++++ + ++ e+++ 
  KHJ30131.1 217 LIGEPGVGKTTVVEGLALRIvNNdvpdnlaackllSLDVGSLVAGSKYRGEFEER 271
                 8899************988766677777777777777777777777777776665 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0019
      AAA_18   3 ltGtpGvGKttlakeLskrl 22 
                  +G++G+GKt l+k+L++ l
  KHJ30131.1 629 FCGPSGTGKTLLTKALAEFL 648
                 79**************9865 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1       0.7   3.1e+02      36      82 ..     100     164 ..      97     194 .. 0.72
   2 !    7.0   0.0    0.0095       4.3      20      39 ..     214     233 ..     201     248 .. 0.81
   3 ?   -1.9   0.1       5.2   2.3e+03      93     180 ..     407     428 ..     380     470 .. 0.62
   4 ?   -1.2   0.1       3.2   1.4e+03     131     188 ..     558     614 ..     556     617 .. 0.81
   5 !    8.6   0.0    0.0032       1.4      24     114 ..     630     722 ..     625     727 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.7
      AAA_30  36 kalreaweaag..........grviglAptgkaAkvLaeelgieastiakllkrlk........g 82 
                 k+lr+a+e ++          + +i+l+  ++  ++L+e+  i+++ i+  +++ +         
  KHJ30131.1 100 KTLRKAHELQKtqkdsfvavdHLIIALTEDSTIQQALKEGNIINTKVIHDAITQIRgtkrvdtkT 164
                 5555555555445577777777889999999999******99**********9999555554440 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0095
      AAA_30  20 vavltGpAGtGKttalkalr 39 
                   vl G +G GKtt++++l+
  KHJ30131.1 214 NPVLIGEPGVGKTTVVEGLA 233
                 46899***********9885 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 5.2
      AAA_30  93 ivDEagmvdtkqlaallkaaekagakvilvGDerQlasVeaGgvlrdlveaagigtaeLtevvRqkeseeraaalalregdae..ealea 180
                 ++DEa+ +  ++ +                                                                    +  eal++
  KHJ30131.1 407 LIDEAAAAVRTERE--------------------------------------------------------------------SlpEALDK 428
                 44444443333333....................................................................22233333 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 3.2
      AAA_30 131 VeaGgvlrdlveaagigtaeLtevvRqkeseeraaalalregdaeealealadrgrih 188
                 V++ ++ + +++a+gi++++L++  + k  +++++  ++  g+ e a++a++d+ r++
  KHJ30131.1 558 VGPEQINEIVARATGIPVTRLKTTEKEKLLQMEKVLAKIVVGQKE-AVQAVSDKIRLQ 614
                 566666777788889999999999999999999999999999998.889888877765 PP

  == domain 5  score: 8.6 bits;  conditional E-value: 0.0032
      AAA_30  24 tGpAGtGKttalkalreaweaaggrviglAptgkaAkv.Laeelgi.eastiakllkrlkgrarlepgtllivDEagmvdtkqlaallkaaek 114
                  Gp GtGKt + kal+e + ++ + +i l  ++ + +  +++ +g+ +++  +    +l+++ r +p ++++ DE+  ++ + l+ ll+ +++
  KHJ30131.1 630 CGPSGTGKTLLTKALAEFLFDDPKAMIRLDMSEYQERHtVSRMIGApPGYVGHDAGGQLTEALRRKPFSIILFDEVEKAAKEVLTILLQLMDD 722
                 69****************999987777777776665555888888767777788888888767777778888888888888888888887765 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.045        20      22      46 ..     212     236 ..     192     265 .. 0.75
   2 !   11.3   0.1   0.00035      0.16      24      48 ..     626     650 ..     595     748 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.045
  Mg_chelatase  22 gHnlllvGppGsGKtmlakrlpsll 46 
                   + n +l+G pG GKt + + l+  +
    KHJ30131.1 212 KNNPVLIGEPGVGKTTVVEGLALRI 236
                   557799**********998876555 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00035
  Mg_chelatase  24 nlllvGppGsGKtmlakrlpsllpp 48 
                   ++l++Gp+G+GKt+l k+l++ l +
    KHJ30131.1 626 SFLFCGPSGTGKTLLTKALAEFLFD 650
                   589****************998854 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0091       4.1       3      23 ..     217     237 ..     216     249 .. 0.86
   2 !   10.7   0.0    0.0012      0.53       2      23 ..     628     649 ..     627     671 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0091
  RNA_helicase   3 lyGpsgeGKStlakeLakall 23 
                   l G++g+GK+t+++ La ++ 
    KHJ30131.1 217 LIGEPGVGKTTVVEGLALRIV 237
                   78*************998886 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.0012
  RNA_helicase   2 wlyGpsgeGKStlakeLakall 23 
                   +++Gpsg+GK++l+k La+ l 
    KHJ30131.1 628 LFCGPSGTGKTLLTKALAEFLF 649
                   69**************998765 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.042        19       6      80 ..     216     300 ..     212     359 .. 0.66
   2 ?   -1.2   0.0       4.3   1.9e+03      76     115 ..     520     559 ..     497     567 .. 0.85
   3 !   11.0   0.0   0.00075      0.34       8      90 ..     630     723 ..     624     732 .. 0.70

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.042
      AAA_14   6 vitGaRrvGKTtllkqlikell...vkkesilyinldderd......kkla.dpekllelileklke.ekktylflDEiqevpewe 80 
                 v+ G   vGKTt+++ l+ +     v +++    +l + +       +k++ ++e+ l+ +l+++++ ++  +lf DE++ + ++ 
  KHJ30131.1 216 VLIGEPGVGKTTVVEGLALRIVnndV-PDNLAACKLLSLDVgslvagSKYRgEFEERLKGLLKEVEDsKEFIVLFVDEMHLLMGAG 300
                 56677789*****9999855556642.3444444444433344466633333555566666666555345566999**99985444 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 4.3
      AAA_14  76 vpewekalkslvdegknldvivtGSnskllskeiatslag 115
                 +pe ek++ksl +e+   d  ++ S++ +    + t+ +g
  KHJ30131.1 520 IPEQEKYIKSLEKEKAAADAALSSSSNPDSGGSLITDTVG 559
                 6889999****99999999999999999888777777766 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 0.00075
      AAA_14   8 tGaRrvGKTtllkqlikellvkkesilyinldderdkkladpe..............kllelileklkeekktylflDEiqev.pewekalkslvdeg 90 
                  G+  +GKT l k l++ l+ +++ ++ +++ + +++                    +l e++++    +  +++++DE+ ++ +e+ ++l +l+d+g
  KHJ30131.1 630 CGPSGTGKTLLTKALAEFLFDDPKAMIRLDMSEYQERHTVSRMigappgyvghdaggQLTEALRR----KPFSIILFDEVEKAaKEVLTILLQLMDDG 723
                 58999**********98777888999999998888854332224444455554223233333333....34567******986478999999999988 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1      0.77   3.4e+02      49      78 ..       7      92 ..       3     184 .. 0.64
   2 !    9.9   0.0     0.002      0.88       9      36 ..     211     238 ..     204     255 .. 0.74
   3 ?    4.1   0.0      0.12        53      12      34 ..     626     648 ..     614     657 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.77
      AAA_19 49 aftgrAakelrerlaalgae....atTiH.rlal.....................................................l 78
                 ft rA+k +++++ +++ +     + +H +  l                                                     +
  KHJ30131.1  7 NFTDRATKAIADAMGMAETNahsqVQPLHlA--LslldpprddasdsssqslfrqvierahgnaqaiqralnkavvrlpsqnpppeqM 92
                6999*******99944433344443333322..1446666555555555555555555555555555555555555555555555552 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.002
      AAA_19   9 kekvllvtaGpGtGKTrvlkhivallve 36 
                 ++++ ++++ pG GKT+v+++    +v+
  KHJ30131.1 211 TKNNPVLIGEPGVGKTTVVEGLALRIVN 238
                 45667899**********9987655544 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.12
      AAA_19  12 vllvtaGpGtGKTrvlkhivall 34 
                  +l  ++ GtGKT ++k+  + l
  KHJ30131.1 626 SFLFCGPSGTGKTLLTKALAEFL 648
                 34555667*****9999887765 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0     0.006       2.7       3      21 ..     216     234 ..     214     245 .. 0.86
   2 ?   -2.2   0.7       9.4   4.2e+03      28      69 ..     401     445 ..     386     487 .. 0.61
   3 !    9.2   0.0    0.0031       1.4       3      21 ..     628     646 ..     626     664 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.006
      AAA_28   3 vitGgestGKTtlleaLaa 21 
                 v++G ++ GKTt++e La 
  KHJ30131.1 216 VLIGEPGVGKTTVVEGLAL 234
                 89***************94 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 9.4
      AAA_28  28 pEaareileekl...akgedalpwvedllafaervleeqleeeaa 69 
                 p++a ++++e +   +++++ lp++ d+l+ ++++l+ +++++ +
  KHJ30131.1 401 PDSAVDLIDEAAaavRTERESLPEALDKLNRKSQQLKIEIHALSR 445
                 555555555555333444455555445555555555555444433 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.0031
      AAA_28   3 vitGgestGKTtlleaLaa 21 
                  + G+++tGKT l++aLa+
  KHJ30131.1 628 LFCGPSGTGKTLLTKALAE 646
                 689**************97 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.062        28      15      31 ..     216     232 ..     208     239 .. 0.86
   2 ?   -1.2   0.4       6.1   2.8e+03      40      97 ..     434     501 ..     416     530 .. 0.59
   3 !   10.6   0.0    0.0013       0.6      16      59 ..     629     671 ..     625     807 .. 0.61

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.062
                 EEEESTTSSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxx RF
    ABC_tran  15 aivGenGaGKStLlkll 31 
                 +++Ge G GK+t+++ l
  KHJ30131.1 216 VLIGEPGVGKTTVVEGL 232
                 79**********99766 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 6.1
                 EEEEETTCEGGGB-HHHCCHCEEEE-SS.--S-TTSB.HHHH........HHHTCHHHHHHHSTTGGT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx.xxxx........xxxxxxxxxxxxxxxxxx RF
    ABC_tran  40 Geilldgkdlkeqeleslrkeigvlpqe.pqlfpelt.vren........esdeeiekalsklglkel 97 
                  +++++ + l++++ e ++ +++  +++ +++ +el+ +re+        ++ +e++  l++l+ k++
  KHJ30131.1 434 QQLKIEIHALSREKDEASKTRLAQAKEDaSNVEEELRpLREKyeserargKAIQEAKIKLEQLKVKKD 501
                 44555555555566666666666666665566666665555543333232222223333444444443 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.0013
                 EEESTTSSHHHHHHHHTTSS--.SEEEEEETTCEGGGB-HHHCCH CS
                 xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  16 ivGenGaGKStLlkllagllkp.teGeilldgkdlkeqeleslrk 59 
                 + G++G+GK+ L k+la+ l +  +  i+ld+ + +e  ++ +++
  KHJ30131.1 629 FCGPSGTGKTLLTKALAEFLFDdPKAMIRLDMSEYQE--RHTVSR 671
                 68***************97644267777888777777..333333 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0    0.0054       2.4      92     120 ..     205     233 ..     125     243 .. 0.85
   2 !    8.1   0.0    0.0053       2.4      78     121 ..     603     646 ..     571     672 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0054
                  HHHHHCTTSEEEEECSTTSSHHHHHHHHC CS
  RsgA_GTPase  92 elkellkdktsvlvGqSGvGKStLinall 120
                  ++ ++ +++  vl+G+ GvGK+t+++ l+
   KHJ30131.1 205 RILSRRTKNNPVLIGEPGVGKTTVVEGLA 233
                  455555667789************98876 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0053
                  EEEE--TTTHTTHHHHHHHCTTSEEEEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase  78 evllvsaktkegleelkellkdktsvlvGqSGvGKStLinallp 121
                  +v +vs k + + + l++  +    +++G+SG GK+ L +al++
   KHJ30131.1 603 AVQAVSDKIRLQRAGLSNPNQPPSFLFCGPSGTGKTLLTKALAE 646
                  45556666666666677777778899***********9999975 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.57   2.5e+02      13      50 ..     201     238 ..     144     245 .. 0.83
   2 ?    2.3   0.0      0.33   1.5e+02     125     145 ..     277     297 ..     263     317 .. 0.83
   3 !    9.9   0.0    0.0015      0.68       7      49 ..     599     649 ..     594     656 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.57
                 HHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S CS
      ResIII  13 enlleklkskrdkrglikmaTGtGKTlvaaklierllk 50 
                 ++++  l+ + +++ ++  + G+GKT v   l+ r+ +
  KHJ30131.1 201 RRVIRILSRRTKNNPVLIGEPGVGKTTVVEGLALRIVN 238
                 444544554556677789999******99888877766 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.33
                 ..HHHTTT-SEEEEETGGGTT CS
      ResIII 125 seellrdrfdviiiDEaHrlg 145
                 +e  ++++f v+++DE H l 
  KHJ30131.1 277 KEVEDSKEFIVLFVDEMHLLM 297
                 5567789999********765 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.0015
                 HHHHHHHHHT..............TTSEEEEEESTTSTHHHHHHHHHHHH- CS
      ResIII   7 yQeeaienlleklks........krdkrglikmaTGtGKTlvaaklierll 49 
                  Q+ea++++ +k+          ++   +l+  + GtGKTl+  +l+e l+
  KHJ30131.1 599 GQKEAVQAVSDKIRLqraglsnpNQPPSFLFCGPSGTGKTLLTKALAEFLF 649
                 69********99977889999988899**************9988887666 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0031       1.4       3      22 ..     213     232 ..     211     293 .. 0.85
   2 !    7.5   0.0    0.0069       3.1       4      30 ..     626     651 ..     623     729 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0031
      AAA_24   3 lkiliyGpsgiGKTtlakel 22 
                 ++ +++G++g+GKTt++  l
  KHJ30131.1 213 NNPVLIGEPGVGKTTVVEGL 232
                 56699**********99766 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0069
      AAA_24   4 kiliyGpsgiGKTtlakelgpkplfid 30 
                 ++l  Gpsg+GKT l k l  ++lf d
  KHJ30131.1 626 SFLFCGPSGTGKTLLTKAL-AEFLFDD 651
                 56789*************9.8877755 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0         1   4.5e+02     116     154 ..     198     238 ..     100     245 .. 0.69
   2 !   13.9   0.0   4.6e-05      0.02     128     205 ..     623     701 ..     605     723 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1
       T2SSE 116 ekiaevlrkav.rerglilvsGgTgsGKttllya.llkein 154
                  +i++v+r    r++ + ++ G  g GKtt++   +l ++n
  KHJ30131.1 198 GEIRRVIRILSrRTKNNPVLIGEPGVGKTTVVEGlALRIVN 238
                 44455554432025677788899999999998541455554 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 4.6e-05
       T2SSE 128 erglilvsGgTgsGKttllyallkeinksderivtvEDpvEiqleganqvqlnak..kakvtfadllraaLRlrPDrimv 205
                 +  ++l+ G+ g+GKt l+ al +++ ++  + ++  D  E+q ++     + a    ++ ++   l +aLR++P  i++
  KHJ30131.1 623 QPPSFLFCGPSGTGKTLLTKALAEFLFDD-PKAMIRLDMSEYQERHTVSRMIGAPpgYVGHDAGGQLTEALRRKPFSIIL 701
                 55689****************99999999.5666666******99988777777677999999999*******9977765 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.093        42       4      23 ..     217     236 ..     215     271 .. 0.83
   2 ?    0.6   0.0       1.1   4.8e+02       5      23 ..     630     648 ..     627     659 .. 0.84
   3 !    8.6   0.0    0.0035       1.6      64     111 ..     698     745 ..     688     752 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.093
       AAA_3   4 legvPGlaktllvkalakal 23 
                 l g PG++kt++v+ la  +
  KHJ30131.1 217 LIGEPGVGKTTVVEGLALRI 236
                 6789**********999654 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 1.1
       AAA_3   5 egvPGlaktllvkalakal 23 
                  g  G++ktll kala+ l
  KHJ30131.1 630 CGPSGTGKTLLTKALAEFL 648
                 5678************976 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.0035
       AAA_3  64 nllladeinrappktqsalleameerqvtvegethklpepflvlatqn 111
                 +++l de+++a+  + + ll+ m++ ++t ++ +    ++ +v+ t n
  KHJ30131.1 698 SIILFDEVEKAAKEVLTILLQLMDDGRITDGQGRVVDARNCIVVMTSN 745
                 689**************************8887777777778888877 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0     0.003       1.4      22      58 ..     212     247 ..     203     249 .. 0.78
   2 ?    6.2   0.0     0.019       8.5      24      44 ..     626     646 ..     617     654 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.003
      AAA_29  22 kgatlltGpsGsGKSTllDAiqalLvpakkvrfNkaa 58 
                 k++ +l+G+ G+GK+T++  ++  +v +  v  N aa
  KHJ30131.1 212 KNNPVLIGEPGVGKTTVVEGLALRIVNND-VPDNLAA 247
                 45789*************99888777776.6666665 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.019
      AAA_29  24 atlltGpsGsGKSTllDAiqa 44 
                 ++l+ GpsG+GK+ l  A++ 
  KHJ30131.1 626 SFLFCGPSGTGKTLLTKALAE 646
                 589*********988777765 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00091      0.41      37     109 ..     216     291 ..     201     315 .. 0.71
   2 ?    3.7   0.1     0.093        41      37      54 ..     628     645 ..     626     650 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00091
      AAA_25  37 llaGapgtGKttlaldlalavatGkpwlg...pvapeqgkVlyvsaEds.edelrrRlravgealrddarllvldla 109
                 +l+G pg+GKtt++  lal ++  + +++    ++     V  ++a  + + e+++Rl+ ++++++d ++  vl ++
  KHJ30131.1 216 VLIGEPGVGKTTVVEGLALRIVNND-VPDnlaACKLLSLDVGSLVAGSKyRGEFEERLKGLLKEVEDSKEFIVLFVD 291
                 699******************9544.555556333344444443333333668888888888888665555555543 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.093
      AAA_25  37 llaGapgtGKttlaldla 54 
                 l++G++gtGKt l+  la
  KHJ30131.1 628 LFCGPSGTGKTLLTKALA 645
                 689**********98776 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.1    0.0043       1.9       4      38 ..     196     230 ..     194     242 .. 0.89
   2 ?    3.6   0.0      0.12        52     102     189 ..     268     352 ..     250     375 .. 0.70
   3 ?   -1.3   0.8       3.7   1.7e+03      71     126 ..     458     509 ..     423     602 .. 0.54
   4 ?    3.7   0.0      0.11        50      22      68 ..     625     672 ..     615     722 .. 0.63
   5 ?    0.2   0.0       1.3   5.8e+02     119     148 ..     695     719 ..     682     748 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0043
    ATPase_2   4 RekelkeleeilerepneiyfiYGpegsGKtaLlk 38 
                 R+ e++++ +il+r +++  ++ G  g+GKt+++ 
  KHJ30131.1 196 RDGEIRRVIRILSRRTKNNPVLIGEPGVGKTTVVE 230
                 899*****************************986 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.12
    ATPase_2 102 vfkaielllekikkkgkkiiiiiDelqklidlglngaellvkeLlnliesltkekhlcvviclsSeglfiervyneselegrhkyilv 189
                  ++ ++ ll+++++++  i++++De+  l   g+ g++    + +nl++     +   ++i ++  +  ++++++ +  e r + +lv
  KHJ30131.1 268 FEERLKGLLKEVEDSKEFIVLFVDEMHLLMGAGSSGEG--GMDAANLLKPM-LARGQLHCIGATTLSEYRKYIEKDAAFERRFQQVLV 352
                 56788999999*999988********999966665433..33444444432.234445666666666666666666666666666555 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 3.7
    ATPase_2  71 eeeekkklekalgiavpkaeleeilkeksklvfkaielllekikkkgkk...iiiiiDe 126
                  +e+++++e+ l    +k e e       +   kai++++ k+++ + k      i D+
  KHJ30131.1 458 AKEDASNVEEELRPLREKYESE-------RARGKAIQEAKIKLEQLKVKkddATRIGDD 509
                 3333333333332222222221.......111222222222222222111113334444 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.11
    ATPase_2  22 iyfiY.GpegsGKtaLlkeiienledkdkyviyyialreesiskldef 68 
                 + f++ Gp g GKt L k ++e l d  k  i ++  + ++ ++++++
  KHJ30131.1 625 PSFLFcGPSGTGKTLLTKALAEFLFDDPKAMIRLDMSEYQERHTVSRM 672
                 455544999999999999999888666665555544444444445555 PP

  == domain 5  score: 0.2 bits;  conditional E-value: 1.3
    ATPase_2 119 k..iiiiiDelqklidlglngaellvkeLlnl 148
                 k   ii++De+ k+        ++++  Ll+l
  KHJ30131.1 695 KpfSIILFDEVEKAA-------KEVLTILLQL 719
                 234799*******98.......3444555554 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.014       6.2      12      42 ..     205     235 ..     196     242 .. 0.75
   2 !    7.6   0.0    0.0081       3.7      21      43 ..     619     648 ..     583     655 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.014
                 HHHHHCHTEEEEEEESTTSSHHHHHHHHHHH CS
        TsaE  12 kklakalgdvilLeGdLGaGKTtlvrglaka 42 
                 + l + +++  +L G+ G+GKTt v gla  
  KHJ30131.1 205 RILSRRTKNNPVLIGEPGVGKTTVVEGLALR 235
                 5555555667899**************9865 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0081
                 E.......EEEEESTTSSHHHHHHHHHHHT CS
        TsaE  21 v.......ilLeGdLGaGKTtlvrglakal 43 
                         +l+ G+ G+GKT l+++la+ l
  KHJ30131.1 619 SnpnqppsFLFCGPSGTGKTLLTKALAEFL 648
                 134445558999**************9865 PP

>> Cep57_CLD_2  Centrosome localisation domain of PPC89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   9.2   3.5e-05     0.016       4      66 ..     418     481 ..     415     489 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.5e-05
  Cep57_CLD_2   4 evktLqnrLdsltrklqvheeelkrLnkERdsalr.qLgvAyeelneLkaevealrkELkeqra 66 
                  e ++L + Ld l+rk q   +e+ +L++E d+a + +L +A e++ +  +e++ lr++ +++ra
   KHJ30131.1 418 ERESLPEALDKLNRKSQQLKIEIHALSREKDEASKtRLAQAKEDASNVEEELRPLREKYESERA 481
                  6678999*************************98549*******************99777765 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0    0.0011      0.49       4      30 ..     216     242 ..     215     259 .. 0.86
   2 ?    2.6   0.0      0.25   1.1e+02       6      22 ..     630     646 ..     626     653 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.0011
                 EEEC-TTTCHHHHHHHHHHHHCTS-SC CS
       NACHT   4 ilqGeaGsGKTtLlqklalawaegklp 30 
                 +l Ge+G+GKTt +++lal +  ++ p
  KHJ30131.1 216 VLIGEPGVGKTTVVEGLALRIVNNDVP 242
                 689***************998777766 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.25
                 EC-TTTCHHHHHHHHHH CS
       NACHT   6 qGeaGsGKTtLlqklal 22 
                  G++G GKT L + la+
  KHJ30131.1 630 CGPSGTGKTLLTKALAE 646
                 69*********999986 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.21        96      17      39 ..     213     235 ..     199     241 .. 0.75
   2 ?   -2.9   0.4       7.3   3.3e+03     122     173 ..     436     496 ..     418     508 .. 0.48
   3 !    9.6   0.0    0.0011       0.5      12      58 ..     620     667 ..     609     693 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.21
  Zeta_toxin  17 klillgGqpGAGKselaellkde 39 
                    +l G pG GK+++ e l+ +
  KHJ30131.1 213 NNPVLIGEPGVGKTTVVEGLALR 235
                 445677**********9987765 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 7.3
  Zeta_toxin 122 YevevvvvavkkelSrlgvldRyeee...vae......gRlvpkeehdeafeglresveal 173
                  ++e++++  +k ++ +  l+  +e+   v+e        + +++   +a ++++ ++e+l
  KHJ30131.1 436 LKIEIHALSREKDEASKTRLAQAKEDasnVEEelrplrEKYESERARGKAIQEAKIKLEQL 496
                 4555555555555554444444444433322244433223444444444555555555555 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.0011
  Zeta_toxin  12 sqerPklillgGqpGAGKselaellkdele.rqgnvvrldpDdlRelh 58 
                 + ++P + l  G +G GK+ l ++l++ l    + ++rld  +++e+h
  KHJ30131.1 620 NPNQPPSFLFCGPSGTGKTLLTKALAEFLFdDPKAMIRLDMSEYQERH 667
                 4589999********************9998999*************9 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0     0.013       5.8       3      19 ..     216     232 ..     215     248 .. 0.82
   2 ?    5.4   0.0     0.045        20       3      37 ..     628     661 ..     627     672 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.013
                 EEESSTTSSHHHHHHCH CS
         Roc   3 vlvGdsgvGKtsllkrf 19 
                 vl+G+ gvGKt+ ++ +
  KHJ30131.1 216 VLIGEPGVGKTTVVEGL 232
                 79**********99865 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.045
                 EEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEE CS
         Roc   3 vlvGdsgvGKtsllkrfvedkfsekekstigvdfl 37 
                 +++G sg+GKt l k + e  f++  k++i +d++
  KHJ30131.1 628 LFCGPSGTGKTLLTKALAEFLFDDP-KAMIRLDMS 661
                 689*************999888654.566666665 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.014       6.3       5      36 ..     216     247 ..     212     251 .. 0.82
   2 ?   -2.9   0.2       9.9   4.4e+03      44      79 ..     425     460 ..     423     466 .. 0.69
   3 ?   -2.5   0.1       7.3   3.3e+03      82      99 ..     548     565 ..     489     601 .. 0.64
   4 ?    4.5   0.0     0.054        24       4      27 ..     627     650 ..     624     659 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.014
                 EEEESTTSSHHHHHHHHHHHHHHTTS-EEEEE CS
       SRP54   5 llvGlqGaGKTttlaKLaallkkegkkvllva 36 
                 +l+G  G+GKTt +  La ++ ++     l+a
  KHJ30131.1 216 VLIGEPGVGKTTVVEGLALRIVNNDVPDNLAA 247
                 799***************99988866655555 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 9.9
                 HHHHHHHHHHHTTEEEEESSTTSCHHHHHHHHHHHH CS
       SRP54  44 AveQLktlaeklgvpvikkkeeadpaavakeaveka 79 
                 A++ L+   ++l++++ + ++e+d+a+ ++ a  k+
  KHJ30131.1 425 ALDKLNRKSQQLKIEIHALSREKDEASKTRLAQAKE 460
                 889999999999999998777776666554444443 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 7.3
                 TTSSEEEEEE--SSTTHH CS
       SRP54  82 ekidvvlvDTaGrlqndk 99 
                 ++   ++ DT G  q+++
  KHJ30131.1 548 DSGGSLITDTVGPEQINE 565
                 234567777777776665 PP

  == domain 4  score: 4.5 bits;  conditional E-value: 0.054
                 EEEEESTTSSHHHHHHHHHHHHHH CS
       SRP54   4 illvGlqGaGKTttlaKLaallkk 27 
                 +l++G+ G+GKT  +  La+ l +
  KHJ30131.1 627 FLFCGPSGTGKTLLTKALAEFLFD 650
                 79***********99999988765 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0      0.07        32      39      77 ..     206     245 ..     200     291 .. 0.75
   2 ?    6.7   0.0     0.014       6.1      46      68 ..     623     647 ..     591     663 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.07
       Rad17  39 vLesrkkriLLisGPsGCgkstvvkvLskelg.iklrewl 77 
                 +L +r k+  ++ G +G gk+tvv+ L+   +  ++ ++l
  KHJ30131.1 206 ILSRRTKNNPVLIGEPGVGKTTVVEGLALRIVnNDVPDNL 245
                 57777777777889***********999544414455555 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.014
       Rad17  46 r..iLLisGPsGCgkstvvkvLske 68 
                 +    L +GPsG gk+   k L+  
  KHJ30131.1 623 QppSFLFCGPSGTGKTLLTKALAEF 647
                 3346799**********99999865 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.35   1.6e+02      16      47 ..     207     240 ..     193     282 .. 0.82
   2 ?    8.0   0.0     0.004       1.8      23      40 ..     628     645 ..     607     657 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.35
                 HH..H-SEEEEE--TTSSTTHHHHHHHHHHHHTT CS
        PhoH  16 lk..kndivfaiGpaGtGKtylavalavealkkk 47 
                 l+  +++  + iG+ G GKt +   la+++++++
  KHJ30131.1 207 LSrrTKNNPVLIGEPGVGKTTVVEGLALRIVNND 240
                 554445566789*********9999999988876 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.004
                 EEE--TTSSTTHHHHHHH CS
        PhoH  23 faiGpaGtGKtylavala 40 
                    Gp+GtGKt+l+ ala
  KHJ30131.1 628 LFCGPSGTGKTLLTKALA 645
                 568***********9988 PP

>> Torsin  Torsin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   0.00022     0.098      15      80 ..     585     651 ..     577     658 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00022
                 -HHHHHHHHHHH--S-HHHHHHHHHHHHHHHT.-SS-SS-EEEEEEE-TTSSHHHHHHHHHHHHSTT CS
      Torsin  15 nleeLekdlekklfGqhlvkklvvksvkayle.nekpkkpLvlsfhGwtGtGknfvaeiiaenlyrd 80 
                 +l ++ek l+k ++Gq  + + v   ++   +   +p++p  + f G +GtGk  +++ +ae l+ d
  KHJ30131.1 585 KLLQMEKVLAKIVVGQKEAVQAVSDKIRLQRAgLSNPNQPPSFLFCGPSGTGKTLLTKALAEFLFDD 651
                 66789999****************99997655146999************************99976 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3  10.2     0.001      0.46     148     243 ..     405     500 ..     401     513 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.001
        Spc7 148 legleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleelee...kieelkeqk 243
                 ++ ++e ++ +  ++e l e+l++l+++ ++l+ e++ l ++++e     k++L++++e+ +++++e++ +++++++ +++ ++++e   k+e+lk +k
  KHJ30131.1 405 VDLIDEAAAAVRTERESLPEALDKLNRKSQQLKIEIHALSREKDE---ASKTRLAQAKEDASNVEEELRPLREKYESERARGKAIQEakiKLEQLKVKK 500
                 56678889999999**************************97777...789******************999999988877665555100445554444 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       6.8   3.1e+03     173     173 ..     137     137 ..      52     213 .. 0.59
   2 ?    3.5   0.0       0.2        90      23      41 ..     216     234 ..     171     245 .. 0.89
   3 ?   11.9   0.0   0.00054      0.24      19      52 ..     624     657 ..     608     820 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 6.8
      AAA_23 173 e 173
                 +
  KHJ30131.1 137 K 137
                 1 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.2
      AAA_23  23 lItGpNGaGKTTildAikl 41 
                 +++G+ G GKTT+++ + l
  KHJ30131.1 216 VLIGEPGVGKTTVVEGLAL 234
                 6899***********9875 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 0.00054
      AAA_23  19 kgltlItGpNGaGKTTildAiklaLygetprlsr 52 
                 ++ +l++Gp G+GKT +  A+   L+ +++ + r
  KHJ30131.1 624 PPSFLFCGPSGTGKTLLTKALAEFLFDDPKAMIR 657
                 799******************9999998766544 PP

>> DASH_Spc19  Spc19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  12.3     0.013       5.9      49     148 ..     399     501 ..     394     503 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.013
                 THHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHT-XXXXXXXXXXXX....XXXX...XXXXXXXXXXXXX CS
  DASH_Spc19  49 dleaakaslaeeiePqieellekaekeleklerreetLkaklelqegrlsnaesskkeeeeseeskeeeeeeenkeeekskkk...ltkeelerlkkLk 144
                  l +   +l++e + ++++  e + + l+kl+r+ ++Lk ++  ++   ++a++++ ++++++ s+ eee +  +e+ +s++    + +e + +l++Lk
  KHJ30131.1 399 RLPDSAVDLIDEAAAAVRTERESLPEALDKLNRKSQQLKIEIHALSREKDEASKTRLAQAKEDASNVEEELRPLREKYESERArgkAIQEAKIKLEQLK 497
                 566666789999999*********************************999999999999999999888888776666555546777777789999999 PP

                 XXXX CS
  DASH_Spc19 145 qkKe 148
                  kK+
  KHJ30131.1 498 VKKD 501
                 9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (919 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1324  (0.0738468); expected 358.6 (0.02)
Passed bias filter:                      620  (0.0345808); expected 358.6 (0.02)
Passed Vit filter:                       108  (0.00602376); expected 17.9 (0.001)
Passed Fwd filter:                        44  (0.00245412); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              40  [number of targets reported over threshold]
# CPU time: 0.93u 0.29s 00:00:01.22 Elapsed: 00:00:00.48
# Mc/sec: 5728.49
//
Query:       KHJ30132.1  [L=213]
Description: hypothetical protein EV44_g4311 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0022   17.6   7.6     0.0032   17.1   7.6    1.2  1  Spt20      Spt20 family
  ------ inclusion threshold ------
      0.022   14.6   0.1      0.072   12.9   0.1    1.9  1  ANTAR      ANTAR domain
      0.088   12.8   1.7       0.14   12.2   1.7    1.4  1  YscO-like  YscO-like protein
       0.75    9.7  13.4       0.83    9.6  13.4    1.1  1  TFIIA      Transcription factor IIA, alpha/beta subunit


Domain annotation for each model (and alignments):
>> Spt20  Spt20 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   7.6   7.2e-07    0.0032      80     175 ..      63     189 ..      48     198 .. 0.60

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 7.2e-07
       Spt20  80 ikfYeGclIvqvrDhrnsvaqsqktq...............dqkqsqqnqqqqqqqqqqqqqqqq.....................qqeqqqqqnekds 142
                 i   + ++I+  + +  + a + +t+               +     q q+++ qqq+qqq+q+q                     ++ ++  + +  s
  KHJ30132.1  63 ILKKASSIIASQVANLETAARQIETKaksltkavtpalpllN-----QSQKNSRQQQAQQQVQSQspalgqsqpkplhppskltsmAAIAAHGTLQSSS 156
                 555566677777777777777777665555444444444442.....333333333333333333455555779********96543333333333344 PP

       Spt20 143 ttteekekksksknnssksktttkkpkvyrtLL 175
                   + +   k++++nn+++++  +kkpk+ r ++
  KHJ30132.1 157 PLEWTVVGKKQNQNNKNQTQPSAKKPKITRRVI 189
                 44456778999999999999*******777665 PP

>> ANTAR  ANTAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   1.6e-05     0.072       2      32 ..      14      44 ..      13      46 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.6e-05
                HHHHHHHHHHHHHHHHHHHHHHHT--HHHHH CS
       ANTAR  2 qLeealeeRklieqAkgiLmeryglsedeAf 32
                 L+++ ++R++i qA ++L+++y l++d + 
  KHJ30132.1 14 TLDQRHAARSTILQARDLLIQAYTLTPDRGE 44
                588999*********************9875 PP

>> YscO-like  YscO-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.7   3.2e-05      0.14      32     132 ..       9     111 ..       1     129 [. 0.78

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.2e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHH CS
   YscO-like  32 ekEkeklrkleeerdkvkkhkkaKvaqlreeldkGttsdkikkmkryikvvkeelkqeekk.vekQkekVkvAerkvEqareelakkrkev.eklekhk 128
                  ++k++l +++++r    + +   +++   + d+G   + +  ++ + +  +  + +++   +++Q  + ++A+r++E + + l+k+       l++ +
  KHJ30132.1   9 VEDKQTLDQRHAARSTILQARDLLIQAYTLTPDRGEQAQILDLLEIFREYTERGILKKASSiIASQVANLETAARQIETKAKSLTKAVTPAlPLLNQSQ 107
                 467999***************9999999999*******999999999999999988887662799********************99765404444444 PP

                 HHHH CS
   YscO-like 129 eewl 132
                 ++  
  KHJ30132.1 108 KNSR 111
                 4433 PP

>> TFIIA  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6  13.4   0.00018      0.83     165     274 ..      65     177 ..       3     203 .. 0.53

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00018
       TFIIA 165 qsqgsaaqssvaalqaqsqqaqalaepqqq.lekq....qqqqqqqqqqqqqqqvqqqqqeesqqaqqasqeqvagsqvessqtdgaedaleeespv.l 257
                 ++ +s+++s+va+l+ + +q ++ a++ ++  ++     +q+q+++ qqq qqqvq+q+ +  q+++++     ++s+++s     a   l+++sp+ +
  KHJ30132.1  65 KKASSIIASQVANLETAARQIETKAKSLTKaVTPAlpllNQSQKNSRQQQAQQQVQSQSPALGQSQPKP---LHPPSKLTSMAAIAAHGTLQSSSPLeW 160
                 367777778888887776666666666666444445555333333333333333333333333333333...444455555555555555555566664 PP

       TFIIA 258 egelsaeeeagaqkeel 274
                   + ++++++++++++ 
  KHJ30132.1 161 TVVGKKQNQNNKNQTQP 177
                 44333333333322222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1504  (0.0838864); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1576.71
//
Query:       KHJ30133.1  [L=706]
Description: putative f-box wd repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.3e-40  135.8  20.2    2.7e-07   31.2   0.2    7.9  7  WD40         WD domain, G-beta repeat
    2.8e-11   43.6   2.4      0.047   14.0   0.0    6.0  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    3.3e-10   39.7   2.2    7.7e-10   38.5   2.2    1.7  1  F-box-like   F-box-like
    3.2e-08   33.3   0.4      0.005   16.2   0.0    3.2  3  WD40_like    WD40-like domain
    3.9e-08   32.4   5.2      0.077   11.6   0.1    5.7  6  Nup160       Nucleoporin Nup120/160
    8.5e-05   22.3   3.6    0.00018   21.3   3.6    1.6  1  F-box        F-box domain
      0.005   16.4   5.0     0.0065   16.1   1.4    2.4  2  PQQ_2        PQQ-like domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.7   1.4e-06    0.0036       2      38 .]     325     360 ..     324     360 .. 0.83
   2 !   29.6   0.2   3.2e-10   8.3e-07       2      38 .]     365     401 ..     364     401 .. 0.83
   3 !   20.4   0.3   2.6e-07   0.00066       3      38 .]     407     441 ..     405     441 .. 0.91
   4 !   31.2   0.2   1.1e-10   2.7e-07       1      38 []     445     481 ..     445     481 .. 0.93
   5 !   20.0   0.2   3.5e-07   0.00089       1      38 []     485     521 ..     485     521 .. 0.80
   6 !   23.5   0.1   2.7e-08   6.9e-05       3      38 .]     527     561 ..     525     561 .. 0.87
   7 ?    0.2   0.0      0.64   1.6e+03       1      32 [.     565     597 ..     565     600 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 1.4e-06
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + ++tl GH  +v+++   p  ++l+sG+ D+ vr+Wd
  KHJ30133.1 325 NAQKTLVGHvMGVWAI--VPWDNLLVSGGCDRDVRVWD 360
                 6789*****8778888..666677899988*******9 PP

  == domain 2  score: 29.6 bits;  conditional E-value: 3.2e-10
                 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 
                 + ++tl+GH s v++l+ f+++ a   sGs+D t+r+Wd
  KHJ30133.1 365 ESIHTLRGHtSTVRCLKmFDSNTAI--SGSRDTTLRVWD 401
                 789******777****955555555..8**********9 PP

  == domain 3  score: 20.4 bits;  conditional E-value: 2.6e-07
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 c ++l GH ssv++l     g+ ++sGs+D t ++W+
  KHJ30133.1 407 CKKVLVGHqSSVRCL--EIKGDIVVSGSYDSTAKVWS 441
                 88999***999****..778999*************5 PP

  == domain 4  score: 31.2 bits;  conditional E-value: 1.1e-10
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g+c+rtl+GH s ++++    dg+ +a+Gs D +vriWd
  KHJ30133.1 445 GRCVRTLSGHySQIYAI--AFDGDKIATGSLDTSVRIWD 481
                 68********999****..55999999***********9 PP

  == domain 5  score: 20.0 bits;  conditional E-value: 3.5e-07
                 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 g+cl +l GH+s v  +  +  g+ l++G+ Dg+vr+W+
  KHJ30133.1 485 GSCLAVLQGHTSlVGQI--QMRGNTLVTGGSDGSVRVWS 521
                 68********6656555..667777899977*******5 PP

  == domain 6  score: 23.5 bits;  conditional E-value: 2.7e-08
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++ l +H +svtsl  + d + ++sG+ Dg v++Wd
  KHJ30133.1 527 PIHRLAAHdNSVTSL--QFDETRVVSGGSDGRVKVWD 561
                 789999**999****..667777999988*******9 PP

  == domain 7  score: 0.2 bits;  conditional E-value: 0.64
                 TEEEEEEESS.SSEEEEEEETTSSEEEEE.ETTS CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasG.sdDg 32 
                 gq++r+lt+  + v+ +af  ++  ++++ s ++
  KHJ30133.1 565 GQLVRELTAPaDAVWRVAFEEEKCVVMASrS-NR 597
                 6899999999666****99999888887644.55 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.42   1.1e+03      23      67 ..     281     322 ..     278     335 .. 0.74
   2 !    8.8   0.1   0.00079         2      48      88 ..     342     381 ..     308     386 .. 0.86
   3 !    5.5   0.1     0.008        20      27      89 ..     397     463 ..     381     466 .. 0.77
   4 ?    3.9   0.0     0.025        65      36      80 ..     453     495 ..     435     503 .. 0.69
   5 !   14.0   0.0   1.9e-05     0.047      47      91 ..     502     545 ..     496     546 .. 0.92
   6 !   11.2   0.0   0.00013      0.34      38      89 ..     535     583 ..     534     586 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.42
  ANAPC4_WD40  23 RlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrllda 67 
                  R+ gq+v     +++++ v+sL+     k ++va ++ ++++++ 
   KHJ30133.1 281 RTGGQHVARN-ITQDQGVVTSLHL--TSKYIVVALDNAKIHVFNT 322
                  6666777666.5667778888865..5689999999999998875 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00079
  ANAPC4_WD40  48 pdgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                  p ++lL+ +  d  vr+ d+++g+ +h+l+ +++ +v cl+
   KHJ30133.1 342 PWDNLLVSGGCDRDVRVWDMSTGESIHTLRGHTS-TVRCLK 381
                  56899************************99988.699996 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.008
  ANAPC4_WD40  27 qrvwtl.......eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                   rvw++          +++s+vr+L+   +g + + +  d++ ++ ++++g++v++ls + ++ +  + +
   KHJ30133.1 397 LRVWDIktglckkVLVGHQSSVRCLE--IKGDIVVSGSYDSTAKVWSISEGRCVRTLSGHYSQ-IYAIAF 463
                  56666666665543456788999887..5688************************9998885.776665 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.025
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                  ++ s++ ++a   dg  +a +  d++vr+ d ++g ++  l+ ++
   KHJ30133.1 453 GHYSQIYAIA--FDGDKIATGSLDTSVRIWDPHTGSCLAVLQGHT 495
                  4444455554..48899*******************999887665 PP

  == domain 5  score: 14.0 bits;  conditional E-value: 1.9e-05
  ANAPC4_WD40  47 kpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWge 91 
                  ++ g+ L+ + sdg+vr+ + e+   +h l +++++ vt+l++ e
   KHJ30133.1 502 QMRGNTLVTGGSDGSVRVWSLEKMAPIHRLAAHDNS-VTSLQFDE 545
                  5789*****************************995.****9975 PP

  == domain 6  score: 11.2 bits;  conditional E-value: 0.00013
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  d++v+sL++  d++  + + sdg+v++ d+++g++v++l++ ++ av  + +
   KHJ30133.1 535 DNSVTSLQF--DETRVVSGGSDGRVKVWDIKTGQLVRELTAPAD-AVWRVAF 583
                  677888876..78899***********************99888.4766666 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   2.2     3e-13   7.7e-10       2      46 ..     147     191 ..     146     193 .. 0.94

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 3e-13
  F-box-like   2 srLPdEiLlqIFsyL.ppsdLlrlalVCrrWrrvaldtplLWrrlv 46 
                 s LP+Ei+l+I+s++ +p+ L+r ++V+ rWr++ +d+   W++l+
  KHJ30133.1 147 SCLPNEICLRILSCIdDPKVLARSSQVSQRWRELLSDD-VTWKNLC 191
                 68*************88999****************99.*****99 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.2    0.0028       7.3      84     121 ..     297     334 ..     284     342 .. 0.86
   2 !   16.2   0.0   1.9e-06     0.005      13     134 ..     345     468 ..     337     484 .. 0.85
   3 !    7.5   0.0   0.00087       2.2       8      80 ..     501     572 ..     498     596 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0028
   WD40_like  84 distvkviddklliGtnkGsiyvfskdlqleevllgqs 121
                  ++  + + + +++  ++ +i+vf+ d + +++l+g+ 
  KHJ30133.1 297 VVTSLHLTSKYIVVALDNAKIHVFNTDGNAQKTLVGHV 334
                 58899999****************************96 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 1.9e-06
   WD40_like  13 slilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDGtillsllenee.evenekieedistvkviddklliGtn..kGsiyvfs 108
                 +l++ Gg d  ++v ++ ++es+  + + +  v   k+ d +  + ++ D t+   +++ +  +      +  + + ++ +d ++ G++  + +++  s
  KHJ30133.1 345 NLLVSGGCDRDVRVWDMSTGESIHTLRGHTSTVRCLKMFDSNTAISGSRDTTLRVWDIKTGLcKKVLVGHQSSVRCLEIKGDIVVSGSYdsTAKVWSIS 443
                 68899*************************************************9***99984333455677888888888888889872245666677 PP

   WD40_like 109 kdlqleevllgqsseIkeikiennki 134
                 +   ++ +l+g++s+I  i  + +ki
  KHJ30133.1 444 EG-RCVRTLSGHYSQIYAIAFDGDKI 468
                 77.999***********999887776 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.00087
   WD40_like   8 iskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDGtillslleneeevenek 80 
                 i+ +g+ ++ Gg d  ++v +le    +  ++  ++Sv   ++ d+  ++ +  DG +   +++ ++ v++  
  KHJ30133.1 501 IQMRGNTLVTGGSDGSVRVWSLEKMAPIHRLAAHDNSVTSLQF-DETRVVSGGSDGRVKVWDIKTGQLVRELT 572
                 567899999*****************************97765.889999999*****999999999887644 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.12     3e+02     238     255 ..     352     369 ..     334     374 .. 0.82
   2 !   11.6   0.1     3e-05     0.077     222     252 ..     376     407 ..     373     412 .. 0.90
   3 !    4.9   0.0    0.0033       8.5     223     255 ..     418     450 ..     414     458 .. 0.89
   4 !    3.9   0.0    0.0066        17     231     255 ..     466     490 ..     455     500 .. 0.85
   5 ?    0.1   0.0     0.092   2.4e+02     225     250 ..     500     525 ..     493     535 .. 0.81
   6 !    7.0   0.0   0.00076         2     226     257 ..     539     572 ..     529     602 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.12
                 TT-EEEEEETTTTEEEEE CS
      Nup160 238 rdgkLrvWnlltgkclat 255
                  d+ +rvW+ +tg  + t
  KHJ30133.1 352 CDRDVRVWDMSTGESIHT 369
                 6999********987765 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 3e-05
                 ET......TTTEEEEEETT-EEEEEETTTTEE CS
      Nup160 222 avavvei.gqtylfalsrdgkLrvWnlltgkc 252
                 +v++ ++ +++++ + srd +LrvW+++tg c
  KHJ30133.1 376 TVRCLKMfDSNTAISGSRDTTLRVWDIKTGLC 407
                 56788889*********************987 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.0033
                 T.....TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 223 vavveigqtylfalsrdgkLrvWnlltgkclat 255
                 v++ ei+ +++++ s d + +vW+++ g+c++t
  KHJ30133.1 418 VRCLEIKGDIVVSGSYDSTAKVWSISEGRCVRT 450
                 67788888999999*****************98 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.0066
                 TEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 231 tylfalsrdgkLrvWnlltgkclat 255
                 + +++ s+d  +r+W+  tg+cla+
  KHJ30133.1 466 DKIATGSLDTSVRIWDPHTGSCLAV 490
                 5688899***************997 PP

  == domain 5  score: 0.1 bits;  conditional E-value: 0.092
                 ....TTTEEEEEETT-EEEEEETTTT CS
      Nup160 225 vveigqtylfalsrdgkLrvWnlltg 250
                  +++  ++l++  +dg +rvW+l+ +
  KHJ30133.1 500 QIQMRGNTLVTGGSDGSVRVWSLEKM 525
                 55666788889999*********876 PP

  == domain 6  score: 7.0 bits;  conditional E-value: 0.00076
                 .....TTTEEEEEETT-EEEEEETTTTEEEEEEE CS
      Nup160 226 vei..gqtylfalsrdgkLrvWnlltgkclatid 257
                 ++   ++t +++  +dg+++vW+++tg++++  +
  KHJ30133.1 539 TSLqfDETRVVSGGSDGRVKVWDIKTGQLVRELT 572
                 444557777888889**************98755 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   3.6   6.9e-08   0.00018       2      47 ..     145     191 ..     144     192 .. 0.94

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 6.9e-08
                 HHHHS-HHHHHHHHHTS-HHH.HHHHCTT-HHHHHHHTTHHHHHHHH CS
       F-box   2 tlsrLPsevlrhILerLplsd.llalrrVSkgwrilidsdrlwcksi 47 
                 ++s+LP+e+ + IL+  +    l + ++VS +wr l+ +d+ w+  +
  KHJ30133.1 145 PFSCLPNEICLRILSCIDDPKvLARSSQVSQRWRELLSDDVTWKNLC 191
                 8***************88888**********************9876 PP

>> PQQ_2  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.3     0.004        10      13     143 ..     324     486 ..     279     504 .. 0.71
   2 !   16.1   1.4   2.5e-06    0.0065      13     152 ..     436     575 ..     424     606 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.004
       PQQ_2  13 GaelWrvdlarplgggvsravlsggtlfvatgg.grlvaldaatGkvlWettlegpvvga.plvaegrvvvvasdgqlialdaedGkr........... 98 
                 G+   ++ +  ++  gv +a ++ + l+v +g+ + +  +d +tG+ + + +    +v     ++ + ++  + d +l+  d+++G             
  KHJ30133.1 324 GNAQKTL-V--GHVMGV-WAIVPWDNLLVSGGCdRDVRVWDMSTGESIHTLRGHTSTVRClKMFDSNTAISGSRDTTLRVWDIKTGLCkkvlvghqssv 418
                 4444444.2..344555.666666666666554045777888888888887764444444247888888888888888888888888888888888888 PP

       PQQ_2  99 ....................lWstqqrseepae.lrssaspava....gdtvvvgessgklvaldpkdGk 143
                                     +Ws+ + +  +++ l++  s ++a    gd+++ g  +  + + dp +G+
  KHJ30133.1 419 rcleikgdivvsgsydstakVWSISEGR--CVRtLSGHYSQIYAiafdGDKIATGSLDTSVRIWDPHTGS 486
                 8888888888888888888888866555..6664334444433355668888888888888888888886 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 2.5e-06
       PQQ_2  13 GaelWrvdlar.......plgggvsravlsggtlfvatgggrlvaldaatGkvlWettlegpvvgaplvaegrvvvvasdgqlialdaedGkrlWstqq 104
                  a++W+ + +r         + + + a+ +g+++++++    +  +d+ tG+ l   +    +vg   + ++ +v   sdg+++  + e     ++ + 
  KHJ30133.1 436 TAKVWSISEGRcvrtlsgHYSQIYAIAF-DGDKIATGSLDTSVRIWDPHTGSCLAVLQGHTSLVGQIQMRGNTLVTGGSDGSVRVWSLEKMAPIHRLAA 533
                 4677777544444333333666777788.*************************999999999999999999999999******************333 PP

       PQQ_2 105 rseepaelrssaspavagdtvvvgessgklvaldpkdGkvlWerelaa 152
                 +        s++s  ++  +vv g+s+g++ + d+k+G+++ e +  a
  KHJ30133.1 534 H------DNSVTSLQFDETRVVSGGSDGRVKVWDIKTGQLVRELTAPA 575
                 3......578999***************************87776643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (706 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.68u 0.25s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 4886.71
//
Query:       KHJ30134.1  [L=115]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       309  (0.0172346); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 843.59
//
Query:       KHJ30135.1  [L=321]
Description: putative ribose-phosphate pyrophosphokinase 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-43  147.6   1.0    2.9e-43  146.5   0.1    2.0  2  Pribosyltran_N   N-terminal domain of ribose phosphate pyroph
    1.2e-41  142.7   1.6    3.3e-34  118.5   1.0    2.6  2  Pribosyl_synth   Phosphoribosyl synthetase-associated domain
    5.6e-15   55.2   0.5    1.1e-14   54.3   0.5    1.4  1  Pribosyltran     Phosphoribosyl transferase domain
  ------ inclusion threshold ------
      0.017   14.6   0.2      0.028   13.9   0.2    1.3  1  UPRTase          Uracil phosphoribosyltransferase
      0.023   14.4   0.1        6.9    6.5   0.0    2.5  2  Glyco_hydro_42C  Beta-galactosidase C-terminal domain


Domain annotation for each model (and alignments):
>> Pribosyltran_N  N-terminal domain of ribose phosphate pyrophosphokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.5   0.1   8.1e-47   2.9e-43       2     116 .]       7     123 ..       6     123 .. 0.98
   2 ?   -1.6   0.1      0.69   2.5e+03      55      86 ..     223     250 ..     178     252 .. 0.50

  Alignments for each domain:
  == domain 1  score: 146.5 bits;  conditional E-value: 8.1e-47
  Pribosyltran_N   2 kifagssskeLaekiakrlgvelgkakvsrfadgEikveieesvrgkdvfiiqsls.kpvndnlmelllmidalrrasakritaViPylgysrqd 95 
                     k+++g+s+++La  +a+rlg++++k+ + +++++E++v++ esvr++dvfiiqs++  ++nd lmell+mi+a+++asa+ritaViP ++y+rqd
      KHJ30135.1   7 KLITGNSHPKLAMLVAERLGIQIAKTMCLNYSNQETSVTVGESVRDEDVFIIQSTApGDINDGLMELLIMINACKTASARRITAVIPNFPYARQD 101
                     89*****************************************************9688************************************ PP

  Pribosyltran_N  96 rk.ksrepisaklvaklLeaaG 116
                     +k ksr+pisakl+a++L++aG
      KHJ30135.1 102 KKdKSRAPISAKLIANMLQTAG 123
                     **999***************99 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.69
  Pribosyltran_N  55 slskpvndnlmelllmidalrrasakritaVi 86 
                     +    + d+   l+  ++++   +a++++a++
      KHJ30135.1 223 D----MADTCGTLVKAAETVMAHNAREVVAIV 250
                     3....233344444555555556666666665 PP

>> Pribosyl_synth  Phosphoribosyl synthetase-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   2.1e-08   7.5e-05       2      37 ..     164     199 ..     163     206 .. 0.89
   2 !  118.5   1.0   9.2e-38   3.3e-34      70     183 ..     202     315 ..     198     316 .. 0.97

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 2.1e-08
                     GGGEEEEESSGGGHHHHHHHHHHTT-EEEEE----- CS
  Pribosyl_synth   2 yrnavivakspgsakkatsyaerlrlglavihGeqk 37 
                     ++ +viv+ + g ak+ats a+rl lg a+ih e+ 
      KHJ30135.1 164 VNSCVIVSPDAGGAKRATSIADRLDLGFALIHKERA 199
                     6678****************************9975 PP

  == domain 2  score: 118.5 bits;  conditional E-value: 9.2e-38
                     -------EES--TTSEEEEEEEEE-S-HHHHHHHHHHHHTT--EEEEEEEEE---TTHHHHHHHSS--EEEEESSS--HHHHHT-TTEEEE--HH CS
  Pribosyl_synth  70 kekppltvvGdvgGriaiivddliddvesfvaaaevlkerGaykiyvlathGllssdaprlleesaidevvvtntipheiqklrcskiktvdisl 164
                      e   + +vGdv+ +iai+vdd+ d   ++v+aae++ ++ a  +++++thG+ls +a  +l++s++  +vvtnt+p   ++ +cs+++ +dis 
      KHJ30135.1 202 NEVSRMVLVGDVENKIAILVDDMADTCGTLVKAAETVMAHNAREVVAIVTHGILSGNAIDTLNQSKLSRIVVTNTVPLGNKVEQCSRLRVMDISP 296
                     5566799**************************************************************************************** PP

                     HHHHHHHHHHHT---TT-S CS
  Pribosyl_synth 165 llaeairrihngesmsylf 183
                      laeairr hnges+s+lf
      KHJ30135.1 297 TLAEAIRRTHNGESVSFLF 315
                     ******************9 PP

>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.3   0.5     3e-18   1.1e-14      19     124 ..     155     252 ..     153     282 .. 0.91

  Alignments for each domain:
  == domain 1  score: 54.3 bits;  conditional E-value: 3e-18
                   TEEEEEE--GGGEEEEEEETTTHHHHHHHHHHSTT-EE-EEEEEE-TTT--EE........EE----TTSEEEEE-SEESSSHHHHHHHHHHHCC-B CS
  Pribosyltran  19 aaeileeyngkpdvvvgiargGvpfakiladeLevplayvrkvkyrpdgseeaargssdesrlledpagkkVliVDDildtGgTllaalelLkekgp 115
                   +++i+e+ + +  v+v ++ gG  +a+ +ad+L++ +a + k++ rp+  + ++        l +d+++k+ ++VDD+ dt gTl +a+e + ++++
    KHJ30135.1 155 LRWIRENLDVNSCVIVSPDAGGAKRATSIADRLDLGFALIHKERARPNEVSRMV--------LVGDVENKIAILVDDMADTCGTLVKAAETVMAHNA 243
                   5688888899999****************************************9........9********************************** PP

                   SEEEEEEEE CS
  Pribosyltran 116 eevriavlv 124
                    ev ++v +
    KHJ30135.1 244 REVVAIVTH 252
                   *99888876 PP

>> UPRTase  Uracil phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.2   7.8e-06     0.028      97     175 ..     192     269 ..     177     282 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 7.8e-06
     UPRTase  97 lglqreeetlepveyynkLPkkiaertvlllDpviaTGgsaaaaiqlLkergvgeekIlvlsvlaseegvkrlaeefpk 175
                 +++++e +  + v     L  +++++ ++l+D +  T g++++a +++  ++++e   +v   + s +++++l ++  +
  KHJ30135.1 192 ALIHKERARPNEVS-RMVLVGDVENKIAILVDDMADTCGTLVKAAETVMAHNAREVVAIVTHGILSGNAIDTLNQSKLS 269
                 55555554433332.335778899999*************************999888888999999999988876554 PP

>> Glyco_hydro_42C  Beta-galactosidase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0    0.0019       6.9      16      34 ..      33      51 ..      32      60 .. 0.84
   2 ?    5.3   0.0    0.0043        16       3      23 ..     300     320 ..     299     321 .] 0.88

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0019
                     EEEE-SSS-EE----TT-E CS
  Glyco_hydro_42C 16 FvlNfsneevtvtlpasag 34
                     + lN+sn+e++vt+ +s +
       KHJ30135.1 33 MCLNYSNQETSVTVGESVR 51
                     569**********976665 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0043
                      EEEE....ETTEEEEEE-SSS CS
  Glyco_hydro_42C   3 evqrRengegrylFvlNfsne 23 
                      e++rR+ +++   F++N+ ++
       KHJ30135.1 300 EAIRRTHNGESVSFLFNHAPT 320
                      67899*************886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2451.18
//
Query:       KHJ30136.1  [L=346]
Description: putative sucrase ferredoxin domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-70  237.2   0.0    1.7e-70  236.9   0.0    1.1  1  Suc_Fer-like  Sucrase/ferredoxin-like
  ------ inclusion threshold ------
       0.05   14.2   0.1       0.13   12.8   0.1    1.8  1  Fer4_13       4Fe-4S single cluster domain of Ferredoxin I


Domain annotation for each model (and alignments):
>> Suc_Fer-like  Sucrase/ferredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.9   0.0   1.8e-74   1.7e-70       1     195 []      68     335 ..      68     335 .. 0.97

  Alignments for each domain:
  == domain 1  score: 236.9 bits;  conditional E-value: 1.8e-74
  Suc_Fer-like   1 llgtvkayskhvlvatgksdWpskvedekgslaealkklk........lllsasslp...eekseeekttvlllPdfklveevtpssveelvkeflk 86 
                   l+gt++++s+h+lvatgksdW+++v+de+gs++ea+ k +        l+lsas++p    ++++ ++t+vlllP+++++e+vtp+sv++l++ef++
    KHJ30136.1  68 LYGTIQEWSTHLLVATGKSDWVRDVADEEGSVMEAIVKFAnvkpnngrLMLSASNIPipsCSANYADPTSVLLLPAWIIIENVTPKSVDTLISEFIN 164
                   79***********************************99459****************994467999****************************** PP

  Suc_Fer-like  87 p.........................kvrklpekaliLvCshktrDarCgilapllrkelerelre......kederpggvrvgfisHvGGHkfAgn 152
                   +                         ++r++p++aliL+Cs++trDarCg++apll+ke+er+lre       +de+pggv+++fisHvGGH++A+n
    KHJ30136.1 165 KgpvnstytckhspenislpqnieglSSRPCPHSALILLCSQGTRDARCGQSAPLLKKEFERHLREydllrdLDDETPGGVGIYFISHVGGHRYAAN 261
                   999***********************99**************************************88887777*********************** PP

  Suc_Fer-like 153 viiyrkek.............................agqgiwygrvepedvegiveetilkgkvvke..llRg 195
                   viiyrke+                             a+q+iw++rv+p+++++i+++t+l+g+v+++  +lRg
    KHJ30136.1 262 VIIYRKENsfgldyaesgeeaseamsqslhtdkglggAAQCIWLARVRPNQCQAIIKHTVLRGRVFRPetQLRG 335
                   ******************************************************************99889997 PP

>> Fer4_13  4Fe-4S single cluster domain of Ferredoxin I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   1.5e-05      0.13       7      37 ..      47      77 ..      39     104 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.5e-05
     Fer4_13  7 iacgaCvelaPdvFeeddeggasvvaeqpts 37
                 +c++Cv   P+ F++d+e++ +   +++++
  KHJ30136.1 47 YDCTSCVIKYPKNFKIDEEDELYGTIQEWST 77
                69******************99998888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       350  (0.0195214); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2637.77
//
Query:       KHJ30137.1  [L=301]
Description: putative cytosolic fe-s cluster assembling factor cfd1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.9e-91  305.3   0.1    3.6e-91  305.0   0.1    1.1  1  ParA         NUBPL iron-transfer P-loop NTPase
      5e-13   49.2   0.0    1.1e-12   48.1   0.0    1.5  2  CbiA         CobQ/CobB/MinD/ParA nucleotide binding domain
    1.5e-06   27.7   0.0    2.1e-05   23.9   0.0    2.1  2  MipZ         ATPase MipZ
    2.3e-06   27.0   0.4    6.1e-05   22.3   0.4    2.2  2  ArsA_ATPase  Anion-transporting ATPase
    8.9e-06   25.7   0.1    0.00056   19.9   0.1    2.3  2  AAA_31       AAA domain
     0.0013   18.2   0.5     0.0057   16.2   0.5    1.9  1  CBP_BcsQ     Cellulose biosynthesis protein BcsQ
     0.0016   18.3   0.5       0.18   11.6   0.0    2.3  2  AAA_26       AAA domain
     0.0084   15.1   0.3      0.013   14.5   0.3    1.2  1  MeaB         Methylmalonyl Co-A mutase-associated GTPase MeaB
  ------ inclusion threshold ------
      0.054   13.1   0.3       0.12   12.0   0.3    1.5  1  AAA_25       AAA domain
      0.066   13.1   2.1       0.12   12.2   0.8    1.9  2  RsgA_GTPase  RsgA GTPase
       0.11   11.7   0.2       0.17   11.0   0.2    1.3  1  NB-ARC       NB-ARC domain
       0.13   12.1   0.0       0.26   11.1   0.0    1.5  1  APS_kinase   Adenylylsulphate kinase
       0.15   11.7   0.2          3    7.4   0.1    2.2  2  SRP54        SRP54-type protein, GTPase domain
       0.21   10.8   0.1       0.43    9.8   0.0    1.4  2  Zeta_toxin   Zeta toxin
       0.23   11.8   0.3       0.54   10.6   0.3    1.5  1  AAA_16       AAA ATPase domain


Domain annotation for each model (and alignments):
>> ParA  NUBPL iron-transfer P-loop NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  305.0   0.1     3e-94   3.6e-91       1     231 [.       5     251 ..       5     271 .. 0.93

  Alignments for each domain:
  == domain 1  score: 305.0 bits;  conditional E-value: 3e-94
        ParA   1 kvkkviavlSgKGGVGKStvavnlAlaLakkglkvgllDaDiyGpsiprllgveeekpeqsekkliPvea.........kgikvmSigfllesedeavv 90 
                 kvk++i+vlSgKGGVGKS+++++lA++L+  g +vg+lD+D++Gpsipr++g+e++k++q   +++Pv+           ++k+mS+gfll+++ +avv
  KHJ30137.1   5 KVKHIILVLSGKGGVGKSSITAQLAFSLSLAGNSVGVLDVDLTGPSIPRIFGIESAKVTQAPGGWLPVSIhssndaagiGELKCMSLGFLLPKRGDAVV 103
                 69***********************************************************99*****98777787777789***************** PP

        ParA  91 wrGpmkskaikqllkdvewgelDyLiiDlPPGtgDeqltvaqkl.......plagaviVttpqevaladvkkaiemfkkvkvkvlGvveNmsgfvcpkc 182
                 wrGp+k+++++q+l+dv wg++DyL+iD+PPGt+De++++a++l       ++ +av+Vttpq va+advkk+++++ k+ ++v+G+veNmsgfvcp+c
  KHJ30137.1 104 WRGPKKTAMVRQFLSDVLWGDIDYLLIDTPPGTSDEHISLAENLlqtmnanQMPKAVVVTTPQAVAIADVKKELNFCIKTGIQVIGIVENMSGFVCPQC 202
                 *******************************************988777666669******************************************** PP

        ParA 183 gekteifgkgggeklaeelgvpllgeipldpeireasdegkplvlkepe 231
                 +e+t+if++ggg+k+aee+++++l+++p+dp++    ++gk  v+ +++
  KHJ30137.1 203 SECTNIFSSGGGKKMAEEFHFQFLASVPIDPQLILLFETGKIPVYPNNK 251
                 ***************************************9976665544 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.1   0.0   9.2e-16   1.1e-12       1     115 [.      10     194 ..      10     203 .. 0.92
   2 ?   -2.5   0.0       4.2   5.1e+03     108     127 ..     225     245 ..     215     278 .. 0.57

  Alignments for each domain:
  == domain 1  score: 48.1 bits;  conditional E-value: 9.2e-16
                 EEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEEEESSCCCCHHTTEB-HHHH............................................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................................. RF
        CbiA   1 iaiastkGGvGKTtlaanLaralarrglrVllvDaDpqannlaileglendiep............................................. 54 
                 i++ s+kGGvGK++++a La++l+ +g+ V ++D+D  +++   ++g e  + +                                             
  KHJ30137.1  10 ILVLSGKGGVGKSSITAQLAFSLSLAGNSVGVLDVDLTGPSIPRIFGIESAKVTqapggwlpvsihssndaagigelkcmslgfllpkrgdavvwrgpk 108
                 789**************************************9999999999999999****************************************** PP

                 ...........................CCHCCCHHHHHHCHCHHHH..EEEEEEEEESS...-TTCHHHHHHHHHHCTS-EEEEEE-- CS
                 ...........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA  55 ...........................dlkrllellealgkkkalllkiagvvlnrvdgeneetllkealeelkqrygvpvlgviprd 115
                                            + +  + l+e+l ++++ + +++ vv++ ++   +++  k+ l   + ++g++v+g++   
  KHJ30137.1 109 ktamvrqflsdvlwgdidyllidtppgTSDEHISLAENLLQTMNANQMPKAVVVTTPQAV-AIADVKKELNFCI-KTGIQVIGIVENM 194
                 ***************************999999999****99999999999999999876.5777777776643.6799999988765 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 4.2
                 EEEEEE--CCHCCCCHHTS.- CS
                 xxxxxxxxxxxxxxxxxxx.x RF
        CbiA 108 vlgviprdeavaeaparge.p 127
                 +l+++p d +++ + ++g+ p
  KHJ30137.1 225 FLASVPIDPQLILLFETGKiP 245
                 555555555555444444433 PP

>> MipZ  ATPase MipZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   1.8e-08   2.1e-05       1      53 [.       8      60 ..       8      80 .. 0.89
   2 ?    1.6   0.0      0.12   1.4e+02      96     121 ..     121     147 ..      89     156 .. 0.72

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 1.8e-08
                EEEEE--SSTTSSHHHHHHHHHHHHHTTT--EEEEE--TTT-HHHHHHHHHHH CS
        MipZ  1 hvivlgnekGGsGksttavhvavaLlkkGarvaaidldlrqrtlarylenraa 53
                h+i +   kGG Gks ++  +a +L+ +G +v+++d+dl   ++ r ++  +a
  KHJ30137.1  8 HIILVLSGKGGVGKSSITAQLAFSLSLAGNSVGVLDVDLTGPSIPRIFGIESA 60
                78999999*******************************99999998876655 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.12
                 HHHH-SEEEEE--.SS--HHHHHHHHT CS
        MipZ  96 leaeldfividtP.Gsdsalsrlahsl 121
                 l  ++d+++idtP G+ ++ + la +l
  KHJ30137.1 121 LWGDIDYLLIDTPpGTSDEHISLAENL 147
                 45679*******637666666666554 PP

>> ArsA_ATPase  Anion-transporting ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.4   5.1e-08   6.1e-05       3      38 ..      10      45 ..       8      65 .. 0.81
   2 ?    2.4   0.0      0.06        72     194     244 ..     144     194 ..      95     231 .. 0.77

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 5.1e-08
                 EEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEE-S CS
  ArsA_ATPase  3 vilvgGKGGVGKttvsaatavklsekgkkvllistD 38
                 +++++GKGGVGK+++ a +a  ls  g++v ++ +D
   KHJ30137.1 10 ILVLSGKGGVGKSSITAQLAFSLSLAGNSVGVLDVD 45
                 5789*************************9999888 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.06
                  HHHHHHHHTSTTTEEEEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEEEEE CS
  ArsA_ATPase 194 ikkveeiltdpertsfrlVvipEklslkEteRaikeLkkygikvdavivNk 244
                   +++ ++++ +++   ++V++p  +++ + ++ ++   k gi+v  ++ N 
   KHJ30137.1 144 AENLLQTMNANQMPKAVVVTTPQAVAIADVKKELNFCIKTGIQVIGIVENM 194
                  455666777777778888888888888888888888888888888888775 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.1   4.6e-07   0.00056       2      40 ..       8      46 ..       7      67 .. 0.90
   2 ?    3.7   0.0     0.044        53     108     128 ..     114     135 ..      97     183 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 4.6e-07
      AAA_31  2 kvIaianqKGGvGKTTtsvnlaaalaklgkkvLlvDlDp 40
                ++I +   KGGvGK+  + +la +l+ +g+ v + D+D 
  KHJ30137.1  8 HIILVLSGKGGVGKSSITAQLAFSLSLAGNSVGVLDVDL 46
                589999******************************995 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.044
      AAA_31 108 kellekvk.deYDyiiiDcpPs 128
                 +++l++v   + Dy +iD+pP 
  KHJ30137.1 114 RQFLSDVLwGDIDYLLIDTPPG 135
                 555555431578*********6 PP

>> CBP_BcsQ  Cellulose biosynthesis protein BcsQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.5   4.8e-06    0.0057       3      38 ..      10      44 ..       8     169 .. 0.64

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 4.8e-06
    CBP_BcsQ  3 vlalqGvRGGvGttsllaaLawalhelgesvlviDl 38
                +l+l+G +GGvG++s++a La +l   g+sv v+D+
  KHJ30137.1 10 ILVLSG-KGGVGKSSITAQLAFSLSLAGNSVGVLDV 44
                577777.8*********************9877665 PP

>> AAA_26  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.4     0.024        28       3      34 ..      10      41 ..       8      42 .. 0.86
   2 !   11.6   0.0   0.00015      0.18      93     194 ..     119     235 ..     105     237 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.024
      AAA_26  3 ifvtgtdtgvGKTvvslgLvralkrkgvkvgy 34
                i+v +   gvGK+++++ L+ +l+  g +vg+
  KHJ30137.1 10 ILVLSGKGGVGKSSITAQLAFSLSLAGNSVGV 41
                778888899***********999888888876 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00015
      AAA_26  93 kelekdadivvVEGagglg.vp.iteellnadiaknlgapvilVargglgtinqllltiealrqknvrvlGvilNk....vrnpenvetlekksg.... 181
                 + l+ d d ++++   g++ ++ +++e+l + + +n   + ++V++++  +i+++   ++++ +++++v+G++ N     +++  + +++++++g    
  KHJ30137.1 119 DVLWGDIDYLLIDTPPGTSdEHiSLAENLLQTMNANQMPKAVVVTTPQAVAIADVKKELNFCIKTGIQVIGIVENMsgfvCPQCSECTNIFSSGGgkkm 217
                 44788889999999999985664455688888888888899********************************99755533333444444444443333 PP

      AAA_26 182 .....ipvlGvvPylpdl 194
                       + l++vP +p+l
  KHJ30137.1 218 aeefhFQFLASVPIDPQL 235
                 333338999999999887 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.3   1.1e-05     0.013      32      70 ..      11      49 ..       5      56 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.1e-05
                EEEEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE----- CS
        MeaB 32 vGltGvPGaGkstlvealglelrrrGkrvavlavDPssp 70
                + l G  G+Gks ++ +l+ +l  +G+ v+vl vD + p
  KHJ30137.1 11 LVLSGKGGVGKSSITAQLAFSLSLAGNSVGVLDVDLTGP 49
                558899*****************************6654 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.3   9.7e-05      0.12      33      60 ..       8      36 ..       5      48 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 9.7e-05
      AAA_25 33 gelallaGapgtGKttlaldlalava.tG 60
                + + +l G +g+GK+ ++ +la++++  G
  KHJ30137.1  8 HIILVLSGKGGVGKSSITAQLAFSLSlAG 36
                56789******************988544 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.8    0.0001      0.12      96     126 ..       5      35 ..       3      41 .. 0.81
   2 ?   -1.0   0.0       1.2   1.5e+03       9      49 ..     149     187 ..     112     198 .. 0.57

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.0001
                  HCTTSEEEEECSTTSSHHHHHHHHCTT---- CS
  RsgA_GTPase  96 llkdktsvlvGqSGvGKStLinallpelelk 126
                  ++k+ + vl G+ GvGKS++  +l+ +l+l+
   KHJ30137.1   5 KVKHIILVLSGKGGVGKSSITAQLAFSLSLA 35 
                  5677789**************9998776665 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.2
                  TTTTEES--EEEEEEESTTTT--HHHHHHHHHHHHHTT-EE CS
  RsgA_GTPase   9 vrpkvaNvdqllivvslkepelslnlldrfLvlaeekgiep 49 
                     ++  + ++++v++ +   +    +++ L ++ ++gi++
   KHJ30137.1 149 QTMNANQMPKAVVVTTPQ--AVAIADVKKELNFCIKTGIQV 187
                  222233333333333333..444444444454444444444 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.2   0.00015      0.17      17      41 ..       5      29 ..       1      38 [. 0.84

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00015
                TSCSEEEEEEESTTSSHHHHHHHHC CS
      NB-ARC 17 elqslvvalvGmgGvGKttlakqil 41
                +++ +++ l+G+gGvGK+ + +q  
  KHJ30137.1  5 KVKHIILVLSGKGGVGKSSITAQLA 29
                67889***************99865 PP

>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00022      0.26       3      39 ..       9      45 ..       7      60 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00022
                EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHH CS
  APS_kinase  3 vvvwltGlsgsGKstianalekkLvekgisvylLdGd 39
                +++ l+G  g GKs+i+ +l+ +L   g sv +Ld d
  KHJ30137.1  9 IILVLSGKGGVGKSSITAQLAFSLSLAGNSVGVLDVD 45
                6889******************************977 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.1    0.0025         3       3      38 ..      10      45 ..       8      49 .. 0.89
   2 ?    1.8   0.0      0.13   1.5e+02      72     120 ..     113     162 ..     104     191 .. 0.69

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0025
                EEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEEES CS
       SRP54  3 villvGlqGaGKTttlaKLaallkkegkkvllvaaD 38
                +++l G  G+GK + +a+La  l+  g++v +  +D
  KHJ30137.1 10 ILVLSGKGGVGKSSITAQLAFSLSLAGNSVGVLDVD 45
                57899********************99999988777 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.13
                 HHHHHHHHHHTTSSEEEEEE-.-SSTTHHHHHHHHHHHHHHHSSSEEEEE CS
       SRP54  72 akeavekakeekidvvlvDTa.Grlqndkelmeelkkikkvvkpdevllv 120
                 +++ ++     +id++l+DT  G + ++ +l e+l ++ ++ +  + ++v
  KHJ30137.1 113 VRQFLSDVLWGDIDYLLIDTPpGTSDEHISLAENLLQTMNANQMPKAVVV 162
                 5555555666689*******549999999999998887776644443333 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00036      0.43      17      71 ..       9      64 ..       3      67 .. 0.83
   2 ?   -3.9   0.0       5.8     7e+03     124     137 ..     157     170 ..     141     174 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00036
  Zeta_toxin 17 klillgGqpGAGKselaellkdelerqgnvv.rldpDdlRelhPeyeeilkadpkk 71
                ++++l+G  G GKs++ + l+ +l  +gn v +ld D   + +P+  +i+ a++++
  KHJ30137.1  9 IILVLSGKGGVGKSSITAQLAFSLSLAGNSVgVLDVDLTGPSIPRIFGIESAKVTQ 64
                6789*********************7777664789999999999988888777665 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 5.8
  Zeta_toxin 124 vevvvvavkkelSr 137
                  ++vvv++++++++
  KHJ30137.1 157 PKAVVVTTPQAVAI 170
                 44556666666555 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.3   0.00045      0.54      26      49 ..      10      33 ..       6      51 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00045
      AAA_16 26 lvllsGesGvGKsslvrellrale 49
                +++lsG  GvGKss+  +l+ +l+
  KHJ30137.1 10 ILVLSGKGGVGKSSITAQLAFSLS 33
                689*************99987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       666  (0.0371465); expected 358.6 (0.02)
Passed bias filter:                      584  (0.0325729); expected 358.6 (0.02)
Passed Vit filter:                        97  (0.00541023); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 2281.55
//
Query:       KHJ30138.1  [L=887]
Description: putative tuberous sclerosis 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      5e-25   88.3   1.8      5e-25   88.3   1.8    2.9  3  Hamartin        Hamartin protein
  ------ inclusion threshold ------
       0.65   10.1   3.2       0.51   10.4   0.2    2.1  2  SdrG_C_C        C-terminus of bacterial fibrinogen-binding ad
        2.6    8.1  17.5          3    7.9   1.1    3.8  4  DUF4315         Domain of unknown function (DUF4315)


Domain annotation for each model (and alignments):
>> Hamartin  Hamartin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.3   1.8   8.3e-29     5e-25      70     326 ..     193     498 ..     176     550 .. 0.73
   2 ?    2.0   2.3     0.011        64     696     720 ..     583     607 ..     571     609 .. 0.89
   3 ?   -3.5   3.5      0.51     3e+03     411     507 ..     717     821 ..     622     859 .. 0.56

  Alignments for each domain:
  == domain 1  score: 88.3 bits;  conditional E-value: 8.3e-29
    Hamartin  70 lneclkkaatrLqaLtLLghvvrrqPsWlhKiakhpllksLLKlLktekdivvLmtgvLvlitLLpmipqsvkqyLpdlfevFgrLasw.......nlk 161
                 ln + +++++r+ +L+LL+   r+ P+ lh++  +pl+ +LLK+L+ ++       ++  l ++Lp ip +++qyLp lf+++ r+  w       n++
  KHJ30138.1 193 LNKYFARPESRIFSLSLLCSFLRHPPPHLHQMLLTPLFVNLLKCLQFDTSTRAVSLAMTALAMFLPHIPCTLSQYLPTLFNIYTRMLFWdrvreveNFS 291
                 89999************************************************************************************9777665333 PP

    Hamartin 162 np........gkvpev.ylvHLqas.......lysLFhrLYGmyPcnfvs.......YLrshysmkenletFeevik....PmLetVRiHPeLvtgtkd 233
                 n+         ++ +  +l HL  s       l   F  LYG yP nf+        YL + +s   +l++    +k    P      +HP+    t +
  KHJ30138.1 292 NSdikeistdAHANDWtKLPHLLDSkdeyipeLLQYFTFLYGLYPINFINyiykpqeYLGHTFSLETELDIHPTEVKqrsePFRQVHILHPNFFRYTIE 390
                 323333344355555488999986644443346788*************733333335889999999*****99999888887766668********** PP

    Hamartin 234 tEl.dptRWKklEthDvVieCaklsldpk...easceegyssv............aadptsspytdlqsstgsststpistkrlqlsslsgtspavlsv 316
                  El d +RW k ++ DvV eC  l +++    e+s + +  +              ++  ++ + ++q+   + t  p+s+kr++lssls++s++v   
  KHJ30138.1 391 SELcDDSRWIKSDAADVVAECFALYIPSEdfnEKSSRPNTIKYdpdiigltlhddDSSLIQTGFYEFQA-PDQFTNPPSSQKRTSLSSLSISSSQVDPG 488
                 **7699***************999887443335555555544488888888877755555666666643.33444456666666666666666665544 PP

    Hamartin 317 essrskddei 326
                 +  ++++++ 
  KHJ30138.1 489 NKFSESSSAP 498
                 4444333333 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.011
    Hamartin 696 lktlreqllLlhnqLlyErykRevH 720
                 +  l   ++Ll n L +Ery +++H
  KHJ30138.1 583 IAYLYREIQLLRNFLNFERYLKQQH 607
                 6678889*****************9 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 0.51
    Hamartin 411 prkdeksesskpdlskqeevenekeleeslkskssvtlseLsdvikel.........leaesedsvekeeeeaaisqelseiteekketlvsrggldsp 500
                  ++++k  +++++l++ e  ++e e  e + +   v+ +++++ ++++          e  ++  +e  + ++  +qe+s i ++  +   +   +d p
  KHJ30138.1 717 LKEKQKAAHVQSNLEELERLRSEIEELEMRVRIYEVNEQSIKEAKEDDvtkarlvmlEELLKSRDQELLDARKIFDQEVSYIRKQV-QINKVSPKIDNP 814
                 22222333344444444444333333333333333333334444443333333333211112222233333344455555555554.333555556666 PP

    Hamartin 501 fsrtles 507
                 +++++ +
  KHJ30138.1 815 NFQEMID 821
                 6665544 PP

>> SdrG_C_C  C-terminus of bacterial fibrinogen-binding adhesin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.2   8.6e-05      0.51      32      70 ..     718     756 ..     714     805 .. 0.84
   2 ?   -1.3   0.3      0.35   2.1e+03      83     110 ..     836     867 ..     828     869 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 8.6e-05
                 SS-EEEEEEEEEEECTS...EETTTTT-EEEEEEESSGG CS
    SdrG_C_C  32 kkslksaevvgnlseaeesnskvnknntkvkIYkvnkgq 70 
                 k++ k+a v  nl+e+e   s++++ +++v+IY+vn+++
  KHJ30138.1 718 KEKQKAAHVQSNLEELERLRSEIEELEMRVRIYEVNEQS 756
                 56678899999*************************985 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.35
                 CCCEE-GGGHGC....CEEEECTTEEEEEEEE CS
    SdrG_C_C  83 skledvtnqfdg....kislgdnnsakinfgn 110
                 +k++   +++++    ++ + ++n+ ++n+ +
  KHJ30138.1 836 KKYNHLLTRYSNlqdqYYGFHNDNDDSLNIDE 867
                 45555555555444449999999999999865 PP

>> DUF4315  Domain of unknown function (DUF4315)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.39   2.3e+03      40      71 ..     514     545 ..     510     552 .. 0.82
   2 ?    7.9   1.1    0.0005         3      22      64 ..     615     657 ..     601     670 .. 0.87
   3 ?    4.8   6.5    0.0047        28       4      38 ..     711     745 ..     709     760 .. 0.91
   4 ?   -2.6   0.0      0.96   5.8e+03      13      26 ..     828     841 ..     823     848 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.39
     DUF4315  40 qlVramklspeeLaallkamkegaapgpeaqk 71 
                 ++Vr ++ ++ + +++l++mk+ ++++  + +
  KHJ30138.1 514 RTVRKLSPTIFQRHNVLRSMKNTSVASFASSN 545
                 679999999999999*******9998877655 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0005
     DUF4315  22 rlkelekqktEaENleIvqlVramklspeeLaallkamkegaa 64 
                 r k ++++  EaE  +I+   r+++l+++e + l+ ++++++ 
  KHJ30138.1 615 RRKYIREALNEAETQNILTSNRSLQLKLQEAKRLITQLRKEGE 657
                 889999******************************9998876 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.0047
     DUF4315   4 kieaeieKakeKiselqarlkelekqktEaENleI 38 
                 k+ea+  K k+K++ +q  l ele+ + E E le 
  KHJ30138.1 711 KLEADELKEKQKAAHVQSNLEELERLRSEIEELEM 745
                 999****************************9995 PP

  == domain 4  score: -2.6 bits;  conditional E-value: 0.96
     DUF4315  13 keKiselqarlkel 26 
                 +++i+elq++   l
  KHJ30138.1 828 RSRINELQKKYNHL 841
                 78999999997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (887 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1248  (0.0696079); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.28s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 5944.90
//
Query:       KHJ30139.1  [L=857]
Description: putative topoisomerase ii-associated protein pat1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.8e-270  899.3   9.4   1.6e-269  896.9   9.4    1.8  1  PAT1      Topoisomerase II-associated protein PAT1


Domain annotation for each model (and alignments):
>> PAT1  Topoisomerase II-associated protein PAT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  896.9   9.4  8.8e-274  1.6e-269      33     856 .]      81     854 ..      53     854 .. 0.84

  Alignments for each domain:
  == domain 1  score: 896.9 bits;  conditional E-value: 8.8e-274
        PAT1  33 skaeeedddaldFedtYdgLgdqLdetdDafNddTFggegggdevsakkvgkdfDffgqTakvadaieeEqlrfsrqqpaakasekaaaaelkevkkas 131
                 s+ ++ed d+  FedtYdgLgdqL+e++D+fNddTFgg+ + +++ +k+vgkd+Dffg+Ta+v+ ai++Eq+rfs ++ +ak             ++as
  KHJ30139.1  81 SSLDNEDKDTATFEDTYDGLGDQLEESGDNFNDDTFGGKLE-NSTDSKPVGKDYDFFGRTAEVSLAISQEQARFSGKNLNAK------------NESAS 166
                 44455666889*************************98876.67779*****************************999996............23344 PP

        PAT1 132 qaseqkskpvrtgyekykepepipdlqvdaslWgvaekkaaasaaapevaaaaaslasasrkvlsleEvEaamraqakkkaaqaaaaaaasqqPaaeqa 230
                 ++++  skpvr+g++  ++++ +p++ vdas+Wg+a+kk+++++a+ + + +    a   rk++s++E+Ea+m  ++++ + + + a++  ++P + ++
  KHJ30139.1 167 SHTQFLSKPVRSGIDCPSQSNDVPEMLVDASIWGIAPKKTSSNSASGNLKDSG--FALDKRKIMSVDEIEASMLDHSNNYTFPCNPAHNIYREPFQRSQ 263
                 45566778*******************************99987655444444..44567*****************9999888777777788873333 PP

        PAT1 231 eqaeaaaqaakaeqaqqapesakeqqqeqeqaaqaqqkkeqgkpvtilqrpqskqakpaepsasseaqeakqqappakvqptqil.qnpnrlaarlels 328
                 ++a+  +        ++ p+   +++   e+   a+++ + +++ + ++ ++ kq +++ p++          +p++++ p+ ++ qn  r     +++
  KHJ30139.1 264 STAS--E--------NNLPHYFFKKE---ENFYGAHRQMSLQEQTNLFNYDHLKQISQEYPEMG--------FPPNNPTLPKVLIsQNTGRS----TYK 337
                 3322..1........11222221111...11111111111112222233333332222222222........22323333444331555544....122 PP

        PAT1 329 qkeqaaaqaapeqeakrqqssagkqaqiithpqqlaqlseeekaayLeeeakrakRnhkifllskdnGlmTpqDKnFitRiqlqqLvsAtGnpadqgsd 427
                 +k+    +  p+++        +++ ++++h+ ql +ls+ee  a   +e kr +Rn kifllsk nGlmTpqDKnFi RiqlqqLv+A+Gnp+d++s+
  KHJ30139.1 338 RKT----NLRPQNSGIFW---YSSAPRQTAHQCQLPNLSDEELVALRIDEVKRERRNRKIFLLSKGNGLMTPQDKNFINRIQLQQLVTAAGNPNDHESE 429
                 221....11121112222...33345688999******************************************************************* PP

        PAT1 428 eslseDFYYqVysqirggqrqnpeqplsnFaqTYLfqtgsRqggarrrergaenhvqrmeqqvqraVeaAKnkPKnkqLvieGsLGKisfsnaktPkpL 526
                  + +eDFYYqV+ qi+gg+r+ + +        YLfq+g R+ + r+  +g   h+q+meqqvqraVea K k Knkq v eG+LG+is+s aktPkp 
  KHJ30139.1 430 LNFTEDFYYQVHYQIHGGSREVSGN-------NYLFQSGERSRSSRKPIHGFSSHLQQMEQQVQRAVEASKIKYKNKQSVSEGTLGRISYSSAKTPKPT 521
                 ********************99875.......5****************************************************************** PP

        PAT1 527 Lnikrteseedakrpssakkk.aksseas.ldrksiLrniEkvYstlmkledheRkmpppl.aeesdaeleekhkeWkeklqelneklWeeLkvhepig 622
                 Lni+ +e++ d+k ++ ++ + +  s+++  drk++L++iE+vYstlm+ledh+Rkmp    +++s+ +l++ ++eW++k+qe+n++lW++Lkvhepig
  KHJ30139.1 522 LNIRGPENRMDSKTTGINRDRtSLPSSVNgNDRKTVLADIERVYSTLMQLEDHDRKMPRLSsDNDSNRDLVNLQNEWQRKAQEMNSHLWRQLKVHEPIG 620
                 ********99985544443331333334489***************************8651566999******************************* PP

        PAT1 623 attvhPFiallsfpKGkkaipRifrhlskeqrvtiLtmivvhlDqLdvvrkaqvtsgetqlnaavreeielFsqavmpsLlaylneldldivtgllgli 721
                 at +hPFia+ls+ KG+k +pR+frh+s+eqr+tiLtmi++hlDqLd+vr++ + s etql+a++re+ielFs  vmp+L+  lne++l+ivtg+lgl+
  KHJ30139.1 621 ATSIHPFIAFLSYGKGMKTVPRVFRHISHEQRTTILTMIILHLDQLDLVRQGIFPSIETQLSAEIREKIELFSLSVMPPLFGHLNEAGLEIVTGILGLL 719
                 *************************************************************************************************** PP

        PAT1 722 ltklnvdliaktriGlslLTlllsRaellkqsgags.eeeweeweetynklFdrleptlpeiFPgsvnsgedvyvWqlLAalgigAspdqqqrLVlavk 819
                 l ++n+dlia+t+iG+++LT++lsRael+kq+g+++ +++w++w ++yn +Fd+le tlp+iFP s++++edvyvWq+LAa+gi+Asp qqqrLV+avk
  KHJ30139.1 720 L-TINLDLIARTKIGITILTIILSRAELIKQAGTANdKQDWDQWITIYNGFFDILERTLPNIFPNSIDTDEDVYVWQFLAAIGISASPKQQQRLVVAVK 817
                 5.5******************************9985789*********************************************************** PP

        PAT1 820 dRVldtvalsktlPedlaaqRlanVNLFmraiGLDve 856
                 dRV++tv+ +k+lP+ l+ qRlanVNLFmr+iGLDve
  KHJ30139.1 818 DRVFETVSFAKSLPPGLSDQRLANVNLFMRSIGLDVE 854
                 ************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (857 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       845  (0.0471303); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.33s 00:00:01.05 Elapsed: 00:00:00.46
# Mc/sec: 5605.43
//
Query:       KHJ30140.1  [L=413]
Description: putative glycolipid 2-alpha-mannosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   9.6e-130  432.6  10.0   1.2e-129  432.2  10.0    1.1  1  Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase


Domain annotation for each model (and alignments):
>> Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  432.2  10.0  6.7e-134  1.2e-129      50     325 .]      85     361 ..      53     361 .. 0.95

  Alignments for each domain:
  == domain 1  score: 432.2 bits;  conditional E-value: 6.7e-134
  Glyco_transf_15  50 PiedenenAtllalvrnselakilrsikkvekrFnkkfnYpyvfindepftekfkekieklveeadvefgeipkeewsyPefideekaakaree 143
                       i+  + nAt+++l+rns++++i+rsi++ve+rFn+kf+Y++vf+nd+pf+ +fk+ +++lv+ +++ +g+ipke+ws+P +id++ka+k+re+
       KHJ30140.1  85 TINAAKMNATFVTLARNSDVWDIARSIRQVEDRFNRKFHYDWVFLNDQPFDTTFKKVTTSLVS-GQTFYGQIPKEQWSFPAHIDQNKARKVRED 177
                      3334445********************************************************.****************************** PP

  Glyco_transf_15 144 lad..iaygdsesyrhmcRyysGlfykhellkkydyYwRvePdiklycdieyDvfkymkdekkiygFtlslkeieetiktlWdstkkflkenke 235
                      +a+  i+ygds syrhmcR++sG+f++++l++ky++YwRveP+i+l+cdi+yDvf++m  +kk+y+F+lsl+e+ eti+tlW+s+kkf+k ++e
       KHJ30140.1 178 MAQrkIIYGDSISYRHMCRFESGFFFRQPLMNKYEWYWRVEPSIELFCDIDYDVFRFMSYHKKKYSFVLSLYEYVETIPTLWESVKKFMKAHPE 271
                      ********************************************************************************************** PP

  Glyco_transf_15 236 fieeknslsflsdddqdtynlCeFwsnfeigdldffrseayekfFeylDskGgffYerWgdapvhsiavslllpkdkihffedigyshdp 325
                      +i+e ns+ flsdd++++yn+C+ wsnfeig+ld++rs+ay ++Fe+lD++GgffYerWgdap+hsia++lll+k++ihffedi+y+h p
       KHJ30140.1 272 HISEGNSMGFLSDDGGNSYNHCHMWSNFEIGNLDWLRSKAYLDYFESLDQDGGFFYERWGDAPIHSIAAALLLKKEEIHFFEDIAYYHVP 361
                      ***************************************************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2942.71
//
Query:       KHJ30141.1  [L=114]
Description: hypothetical protein EV44_g3639 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.18   12.1   0.7       0.18   12.1   0.7    2.2  2  Dr_adhesin  Dr family adhesin


Domain annotation for each model (and alignments):
>> Dr_adhesin  Dr family adhesin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.7     1e-05      0.18       8      20 ..      66      78 ..      66      78 .. 0.97
   2 ?   -1.5   0.2       0.2   3.6e+03       7      11 ..     104     108 ..     104     112 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1e-05
  Dr_adhesin  8 aatSvltavsTaH 20
                +++S++++ +TaH
  KHJ30141.1 66 GMASIMFFQGTAH 78
                79*********** PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.2
  Dr_adhesin   7 MaatS 11 
                 M+at+
  KHJ30141.1 104 MTATL 108
                 88886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 874.15
//
Query:       KHJ30142.1  [L=333]
Description: putative bzip transcription [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.011   15.8   6.2      0.029   14.4   6.2    1.8  1  bZIP_1    bZIP transcription factor
      0.025   14.6   1.6      0.025   14.6   1.6    2.2  2  bZIP_2    Basic region leucine zipper


Domain annotation for each model (and alignments):
>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   6.2   3.3e-06     0.029       6      41 ..      50      85 ..      47     115 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.3e-06
                XXXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  6 rekrkqkNReaArrsRqRKqaeieeLerrvkaLeke 41
                 +++++  Rea+r  R+R + +i+ Le+r ++L++ 
  KHJ30142.1 50 LARKRANDREAQRSIRLRTKTRIAYLEQRIQELSGD 85
                57999999*************************975 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   1.6   2.8e-06     0.025       4      38 ..      48      83 ..      46      85 .. 0.87
   2 ?    0.2   0.2      0.09   8.1e+02      26      44 ..      97     115 ..      95     120 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.8e-06
                XXXXXXX.XXXXXXXX-HHHHHHHHHHHHHHHHHHH CS
      bZIP_2  4 eyrerRr.kNreAarrsRekkkakeeeleervkeLe 38
                e+  r+r + reA r+ R + k + ++le+r++eL+
  KHJ30142.1 48 EQLARKRaNDREAQRSIRLRTKTRIAYLEQRIQELS 83
                5566777699************************96 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.09
                 HHHHHHHHHHHHHHHHHHH CS
      bZIP_2  26 keeeleervkeLeeeNaqL 44 
                 ++ elee++ +L+   ++L
  KHJ30142.1  97 RNLELEEELRYLRHLSEAL 115
                 6788899988888766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2424.78
//
Query:       KHJ30143.1  [L=317]
Description: putative vacuolar sorting receptor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-21   76.3   0.0    2.7e-21   75.8   0.0    1.1  1  Man-6-P_recep  Mannose-6-phosphate receptor
    5.1e-15   56.0   0.0    2.8e-14   53.6   0.0    1.9  1  ATG27          Autophagy-related protein 27
    1.2e-08   35.1   0.0     0.0016   18.5   0.0    2.4  2  CIMR           Cation-independent mannose-6-phosphate recepto


Domain annotation for each model (and alignments):
>> Man-6-P_recep  Mannose-6-phosphate receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.8   0.0   4.6e-25   2.7e-21      46     215 ..      80     269 ..      63     286 .. 0.76

  Alignments for each domain:
  == domain 1  score: 75.8 bits;  conditional E-value: 4.6e-25
  Man-6-P_recep  46 dkytyklrvCreveesa.....edagliqid....kkdkketviGrinetqvldGsdWilliykggdeyeshck........kekrkalimisCnk 124
                    ++  ++l+vC    e++      + +l q      +  +++  iG+ n+t  l G   ++l+y++g++  ++ +          ++ +li   C+k
     KHJ30143.1  80 NQANFTLNVCGSLAEKQsnfvgVEESLWQNVsayyELGSERFSIGQENSTLKLRGRR-LVLEYRNGSPCGDRGTsrkdgydqIRRKSSLISFHCDK 174
                    5667788888887776633333223344433111122345678************87.569*****9998887666667543344668999***** PP

  Man-6-P_recep 125 kvladeltlvveer.ekeedcfylfeldssvaCp...keesklsvGsillivllslvavyligGflyqrlvvgakGleqiPnyafWqdlGnlvad 215
                    ++la   + +++   +  ++c y fe+ s+vaC    ++++++  G+++ ++++  + vy++gG++yqr v  a+G  q+Pny +W  +Gn++ d
     KHJ30143.1 175 DPLAAPSSGIFTYVgNSDDECSYYFEVLSKVACMtaePTKQSIGPGAVFALIFIIAILVYFLGGIFYQRNVAHARGWRQLPNYVIWAGIGNFIKD 269
                    ***98777666655166789*************62113456677789********************************************9988 PP

>> ATG27  Autophagy-related protein 27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.0   4.7e-18   2.8e-14     119     258 ..     133     280 ..      64     287 .. 0.72

  Alignments for each domain:
  == domain 1  score: 53.6 bits;  conditional E-value: 4.7e-18
       ATG27 119 ekeglrlelkggky.............gkkkqkaiieflCdeksl.....kfksydeeeeeekdvlrlewktkyACekaekdkkdsskkkeksgwGfFt 199
                 +   l le+++g+              + +  +  i+f Cd++ l      + +y ++ +++ + + +e+ +k AC +ae +k++        g G   
  KHJ30143.1 133 RGRRLVLEYRNGSPcgdrgtsrkdgydQIRRKSSLISFHCDKDPLaapssGIFTYVGN-SDDECSYYFEVLSKVACMTAEPTKQS-------IGPG--A 221
                 33345555553322566666667777677888899*****955554444466778887.4899**************98666554.......6777..5 PP

       ATG27 200 wlfiilflataaYlifgswlNynryGargwDllphgdtirdlPyllkDvvrkvlgtvqg 258
                 ++ +i+++a+++Y+++g++++ n+ +argw  lp+  ++  +  ++kD+   v+++ +g
  KHJ30143.1 222 VFALIFIIAILVYFLGGIFYQRNVAHARGWRQLPNYVIWAGIGNFIKDIFTAVTSSCSG 280
                 9999999***********************************************99877 PP

>> CIMR  Cation-independent mannose-6-phosphate receptor repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   5.7e-06     0.034      49     143 .]      33     148 ..      24     148 .. 0.74
   2 !   18.5   0.0   2.7e-07    0.0016       3      50 ..     163     214 ..     161     222 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.7e-06
        CIMR  49 veCqvtdaagkeyDLsaLsrkse.............nweavdtsasgkkkhfyinvCk.......peakiegCp.saaavClvdkdksvNLGkvqsspq 126
                   C++  + g  yDL  L  +                w++    +++++ +f +nvC        + +++e    +++++    +++ + +G+ +s+++
  KHJ30143.1  33 KPCTISSPTGIFYDLNELRVTIPkdpkkapkgtrieDWKVRGYDYHNNQANFTLNVCGslaekqsNFVGVEESLwQNVSAYYELGSERFSIGQENSTLK 131
                 5677777888888887775432223445666777779****99999************888743333334443345555555556899*********** PP

        CIMR 127 aedgsiqlsYvnGdkcg 143
                      ++l+Y+nG  cg
  KHJ30143.1 132 LRGRRLVLEYRNGSPCG 148
                 *************9996 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 2.7e-07
        CIMR   3 qratvirFvCnetaled..apvflkedi..gdcsylFewetalACvekedve 50 
                 ++++ i F C+++ l    + +f+  +   ++csy+Fe   ++AC+  e+++
  KHJ30143.1 163 RKSSLISFHCDKDPLAApsSGIFTYVGNsdDECSYYFEVLSKVACMTAEPTK 214
                 57899*******9765544556654443349***************877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       631  (0.0351944); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2224.92
//
Query:       KHJ30144.1  [L=631]
Description: putative dna photolyase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.2e-73  245.5   0.9    5.3e-73  244.8   0.9    1.3  1  FAD_binding_7   FAD binding domain of DNA photolyase
    1.5e-36  125.9   0.2    2.7e-36  125.0   0.2    1.4  1  DNA_photolyase  DNA photolyase


Domain annotation for each model (and alignments):
>> FAD_binding_7  FAD binding domain of DNA photolyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  244.8   0.9   5.9e-77   5.3e-73       3     201 ..     317     544 ..     315     545 .. 0.92

  Alignments for each domain:
  == domain 1  score: 244.8 bits;  conditional E-value: 5.9e-77
                    HHHHHHHHHHHHHHCSTTTTTSSTTGCCTT.------HH.H....................HHHHHTT-SS-HHHHHHHHHHHHHS---HHHHHHH CS
  FAD_binding_7   3 reLlwrefyyallaaepelaeralkekfdr.ipweeseeek....................leaWkeGrTGfPlvDAamrqLretGwmhnrlRmiv 77 
                    ++Ll+r++y+ ++aa  +  ++++ ++ +r ipw+ +++ +                    +++Wk GrTGfP++DA+mrqLr++Gw+h+++R++v
     KHJ30144.1 317 GQLLFRDMYFGAQAALSHSFNQTVFNSNCRfIPWHLQSKFDtntkrvtgeyhidspqaeewFQRWKCGRTGFPWIDALMRQLRQEGWIHHLGRHAV 412
                    79*************9777677777777777***9954432456789999********************************************** PP

                    HHHHCT.TT-B-HHHHHHHHHHH-TT--CCHHHHHHHHHCT-STTS-STT----CCCCHHHCSTT-HHHHHH-GGGTTS-HHHHT-GGGSGCHHHH CS
  FAD_binding_7  78 asFltk.dLlidWregeevFeellvDadlasnagnwqwlagtgadaapafrifnpvkqgkkfDpegeyirrwvpeLkklpakyihepwkapaeeqk 172
                    a+Flt+  ++i+W++g+evF+ell+D+++a+nagnwqwl++t   ++ +fr+++p+++ +k+D++g+++r++vpeLk l++kyi+epwkap  + k
     KHJ30144.1 413 ACFLTRgGCYISWERGAEVFKELLLDHEPACNAGNWQWLSCTAFFTQ-FFRCYSPITFPQKYDKNGDFVRKYVPELKMLDKKYIYEPWKAPLIDLK 507
                    *****************************************888887.99********************************************** PP

                    HHT--TTTS........S---SS-HHHHHHHHHHHHH CS
  FAD_binding_7 173 kagvvlgkd........Ypkpivdhkearkraleayk 201
                    kag +l++d        Y kp++d++e+r+ ++e +k
     KHJ30144.1 508 KAGLKLHSDwndlsegtYVKPMFDFNERRNICMEGMK 544
                    *8888888888888888*****************998 PP

>> DNA_photolyase  DNA photolyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.0   0.2     3e-40   2.7e-36       1     150 [.       6     159 ..       6     175 .. 0.91

  Alignments for each domain:
  == domain 1  score: 125.0 bits;  conditional E-value: 3e-40
                     EEEEESS---STT-HHHHHHHCT.TSEEEEEEEE-HHHHTCGS-CHHHHHHHHHHHHHHHHHHHHTT..--EEEEESSHHHHHHHHHHHCTECEE CS
  DNA_photolyase   1 vlvWfrrDlRlhDNpALaaAaas.gepvipvfvldpekahklrvgaarvdfllesLadLdeeLrelg..irLvvrrgdpadvlpelakelgasav 92 
                     vl+Wfr+DlRlhD pAL+aA++  +e ++p++++dp + ++ +vg +r++fl+ + ++L ++L  l+  ++L+v+r  p++v+p+++k ++++++
      KHJ30144.1   6 VLYWFRTDLRLHDSPALNAALDLdAEAFWPIWTWDPYYVYQAKVGINRWQFLIDCQNELSRRLTHLNkkSKLFVLREAPQTVFPKIFKAWKITHL 100
                     79******************8873567**********7777788********************99999************************** PP

                     EEE---SHHHHHHHHHHHHHHHHCTSEEEEE--SSSS-HHHH.HTTTSSSHSSHHHHHH CS
  DNA_photolyase  93 vanreyepdererdeavkealrkagievesfddhtlvepgev.ktkkgkpykvFtpfrk 150
                     v++++++ + rerd+av++a+++ g++v  ++++tl++ +e+ +++k+ p +++ + + 
      KHJ30144.1 101 VFEKDVDAYSRERDAAVRQAAEAVGVKVLMCHGRTLWDSDELvRKNKNLPTMTINQVQT 159
                     ******************************************77777788888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (631 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       672  (0.0374812); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4396.52
//
Query:       KHJ30145.1  [L=977]
Description: putative ap-3 complex subunit delta [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.1e-80  269.3   1.3    1.1e-79  268.4   1.3    1.4  1  Adaptin_N  Adaptin N terminal region
    0.00044   20.3   0.1      0.026   14.6   0.0    2.5  2  Cnd1       non-SMC mitotic condensation complex subunit 1
  ------ inclusion threshold ------
       0.17   12.3   0.4       0.64   10.4   0.1    2.1  2  HEAT_2     HEAT repeats


Domain annotation for each model (and alignments):
>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  268.4   1.3   1.9e-83   1.1e-79       1     522 [.      23     637 ..      23     639 .. 0.90

  Alignments for each domain:
  == domain 1  score: 268.4 bits;  conditional E-value: 1.9e-83
                 XHHHCCHHHHHHCCSSS.-SCHHHHHHHHHHHHHHHCT---GHHHHHHHCCCCSS-CHHHHHHHHHHHHHCTTSCCHHCCCCHHHHHHCCSSSHHHHHH CS
   Adaptin_N   1 eekriqqelaeilnsnk.dddekkkeavkkliylialGedvsflffevvklvaskdfelKrlvYlylellaeesedlalLvtnslqkDlkdpnqlirgl 98 
                 e+++iq +l+e++ + k +d+  k+ a+ kliyl + G+d+s++ f+v+++++s ++ +Kr++Yl +++++ +++d+++L+tn l+kDl++ +    +l
  KHJ30145.1  23 EKEYIQNCLKECRVEIKgQDNDLKTTALLKLIYLEMFGHDMSWAAFHVLEVMSSTNYLQKRVGYLGAMQSFRTDTDVLMLATNLLKKDLTSTSIPTISL 121
                 6899*************988899**************************************************************************** PP

                 HHHHHCCC--CCCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCT..T-SSHHHHHHHHHHHHHH.HCCCCCCCHHHHHHH CS
   Adaptin_N  99 ALrvLssirvpelaedlapaikkllkdrspyvrkkAalailklykkdpdllrkqlveeikell..sdkdpgvvlaAvalleei.kkndrlllkllpklv 194
                  +++L  i++++la + ++++   +++++p++rkkA++++++l  ++p++lr+   ++ik+ l  +++d +v++a v++ +e+  + ++ +l l+p l+
  KHJ30145.1 122 PITTLPHIITSSLALSTLQDLLPRMSHSDPVLRKKAIVTLYRLALVYPEALRPA-WPKIKSRLvdEEEDASVTAAIVNVVCELgWRRPQDFLPLAPRLF 219
                 *****************************************************9.9*******766667**************977777779******* PP

                 CCHHHHHHCS-HHHHHHHHHHHCC---SSHHHH..HHHHHHHCGGCG.CSSCHHHHHHHHHCC.........HCCCCSTHHHCCHHCHHHHHH.SSCCT CS
   Adaptin_N 195 rrLcnllteldpwlqvkiiklltrlarqepeerskkellesllnllq.ssnnaVlletvnliv.........elapknelivlavnaLvrlls.skden 282
                 + L    +  ++w+ +k+ikl+  l++ ep++   k+ll+ l++ ++ + ++++ +e++n i+         e  ++ e+++l+v++L +++  + d n
  KHJ30145.1 220 ELLV---NGGNNWMAIKLIKLFATLTPLEPRLI--KKLLPPLTSIIRtTPAMSLQYECINGIIqggilnsceESISSEEIATLCVSKLRDMIMvDGDAN 313
                 **99...99************************..66**********889*************998888666444445589**********999***** PP

                 CHHHHHCHHHHHHHHXXTTTT.TTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHHHHHHHHHHTTSSXXHH......................... CS
   Adaptin_N 283 lryvaLrtllkivkkepkavq.hldlkifllktdddvsirlkaldlllklvdesNvkeivkeLkkyvkevaded......................... 355
                 l++vaL ++++iv + p+ v+ + d+++++++ ++d+sir++aldl++++v+ +N+  i++ L++++k++  +                          
  KHJ30145.1 314 LKFVALLAFNRIVLTYPSLVEqQEDVIMECID-SPDISIRSRALDLVVGMVNVENLISIIDRLMTQLKDSRSGNnedfnsqpnpiemtpdldetsesmi 411
                 ********************************.*********************************966654445678888889999999999999999 PP

                 ...............HHHHHHHHHHHHHHHS....CCHHHHHHHHHHHHHTT................XXHHH...HHHHHHHHHHHHHHSTTTSTTC. CS
   Adaptin_N 356 ...............fksklvkaIgrlaekf....atdaewvldvllellsl................sgesv...kdeivevirdliqkvpelheei. 415
                                +k  ++  I +++++       d++w++++l++l+ l                 + sv   ++ i e +r++ +kv +++e + 
  KHJ30145.1 412 tskiisseslivpddYKLNVICRILDMCSSNnysnLMDFDWYINTLIQLIYLipsseplstqssdmnlNNFSVfktSERIGEELRNVAVKVRAVREQVt 510
                 999999999*******************999899999**************999999*99998777753323356699****************98664 PP

                 ..HHHHCCTCCG......XXSHHHHHHHHHHHHHTTTTXTT....HHHHHHCTTTTTTTSXHHHHHHHHHHHHHHHHCXGCC.THX...........HH CS
   Adaptin_N 416 ..iekLaellek......ieseearaaaiWllGeygelvsnte.sasdllrslaekfvlesekvklqiltalvKlyltspdketqe...........kl 494
                   +e L+  +++      i s  a+  + W++Ge+++ +   e  +s ++ +l e++  e  +++l  l ++  + + +++ e ++           k+
  KHJ30145.1 511 raAEVLLISTSNnelpphIVSSGALGPIGWVVGEFASDLAVPEsTLSAIIYLLKESVKPEILIIYLHTLPKIFSFIVGDNQREWTRerktmislllaKI 609
                 435555555555444444444449999***********9998889999**************9999999999999987776655557888888999999 PP

                 HHHHHHHHHXXSHHHHHHHHHHHHHHCC CS
   Adaptin_N 495 iqlvlslatssdlevrdRaveylqllss 522
                 i  ++ ++   dlev++Rave+++ll++
  KHJ30145.1 610 IYAFEPFTIHPDLEVQERAVEFSELLKL 637
                 99999999999*************9986 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   4.4e-06     0.026       7     145 ..     123     256 ..     120     266 .. 0.85
   2 ?    2.6   0.3     0.021   1.3e+02      61     149 ..     300     383 ..     293     388 .. 0.61

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 4.4e-06
        Cnd1   7 irtlgcirvpnlveylvepLrkrLkDedpyVRktaaivvakL..ilndmvkekgflselakll..eDenprVvanalaalteiseksenaiynllpdii 101
                 i tl  i  ++l   ++++L  r++ +dp  Rk a++++ +L  + ++    +    ++++ l  e+e+++V a  +++ +e+  + ++ ++ l p ++
  KHJ30145.1 123 ITTLPHIITSSLALSTLQDLLPRMSHSDPVLRKKAIVTLYRLalVYPEAL--RPAWPKIKSRLvdEEEDASVTAAIVNVVCELGWRRPQDFLPLAPRLF 219
                 77888888889999999*************************66566655..5667999999934446799**************************** PP

        Cnd1 102 sklsdalnecsewgqitilefLlsyipkdkqeaeslveklcprl 145
                   l+   n  ++w  i+ +++ ++ +p + +    l++kl p l
  KHJ30145.1 220 ELLV---NGGNNWMAIKLIKLFATLTPLEPR----LIKKLLPPL 256
                 *999...57999********99999999988....666666655 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.021
        Cnd1  61 selakll.eDenprVvanalaalteiseksenaiynllpdiisklsdalnecsewgqitilefLlsyipkdkqeaeslveklcprlqhan 149
                 s+l++++  D +++    al+a++ i    ++++ ++  d+i    d   + +   +   l++++ +++ ++    s++++l+ +l+ ++
  KHJ30145.1 300 SKLRDMImVDGDANLKFVALLAFNRIVLTYPSLVEQQ-EDVIMECID---SPDISIRSRALDLVVGMVNVENL--ISIIDRLMTQLKDSR 383
                 6677776677777777777777777777764444444.455544442...34445555566666666666666..666666666666554 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   0.00011      0.64      31      84 ..     137     196 ..     128     201 .. 0.75
   2 ?   -3.0   0.0       1.7   9.9e+03      35      54 ..     339     358 ..     332     381 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00011
      HEAT_2  31 ealpaLvellededpavRraaaeaLgaigd..pe....alpaLkellddddddvvReaAa 84 
                 ++l+ L++ ++++dp  R+ a+ +L ++++  pe    a+p  k +l d+++d   +aA+
  KHJ30145.1 137 STLQDLLPRMSHSDPVLRKKAIVTLYRLALvyPEalrpAWPKIKSRLVDEEEDASVTAAI 196
                 5678899999***************999844444344489*****998887654334444 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.7
      HEAT_2  35 aLvellededpavRraaaea 54 
                  + e+++++d  +R  a + 
  KHJ30145.1 339 VIMECIDSPDISIRSRALDL 358
                 55666666666666666653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (977 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       763  (0.0425568); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 6433.76
//
Query:       KHJ30146.1  [L=313]
Description: putative tetratricopeptide repeat domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-09   36.6   1.2     0.0012   19.5   0.1    4.8  5  TPR_14    Tetratricopeptide repeat
    5.2e-08   33.3   3.5    0.00021   21.8   0.5    3.7  5  TPR_19    Tetratricopeptide repeat
    1.7e-05   24.7   1.0          7    7.1   0.3    4.5  4  TPR_8     Tetratricopeptide repeat
    0.00059   19.1   0.0     0.0013   18.0   0.0    1.5  1  FAT       FAT domain
      0.002   18.1   3.6       0.57   10.4   0.5    4.6  6  TPR_2     Tetratricopeptide repeat
     0.0021   17.7   0.1        9.7    6.0   0.0    3.9  4  TPR_11    TPR repeat
  ------ inclusion threshold ------
       0.01   16.4   1.6         14    6.5   0.0    4.5  5  TPR_6     Tetratricopeptide repeat
      0.046   14.1   0.7         16    6.2   0.1    3.6  4  TPR_17    Tetratricopeptide repeat
       0.13   12.9   4.2         11    6.6   1.6    2.5  2  DUF5344   Family of unknown function (DUF5344)


Domain annotation for each model (and alignments):
>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0075        15       7      37 ..      52      83 ..      43      90 .. 0.78
   2 ?    1.2   0.0      0.46   9.1e+02      13      34 ..      97     118 ..      91     121 .. 0.83
   3 !   19.5   0.1   5.9e-07    0.0012       7      43 ..     125     161 ..     121     162 .. 0.92
   4 !    6.6   0.1    0.0084        17       4      43 ..     156     195 ..     156     196 .. 0.93
   5 ?   -2.0   0.0       4.7   9.4e+03      19      36 ..     214     231 ..     209     236 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0075
      TPR_14  7 laeallalGdpdeAiallrralalaP.ddaea 37
                l++ +l+ Gd + A a+l+++ +++  d++++
  KHJ30146.1 52 LVHSCLRTGDEKSAFACLQKLTERFGeDNERV 83
                667799*****************986255555 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.46
      TPR_14  13 alGdpdeAiallrralalaPdd 34 
                   +++++ ++ ++++l ++P++
  KHJ30146.1  97 DERELEKILDEYEAILLKDPTN 118
                 5678999999999999999987 PP

  == domain 3  score: 19.5 bits;  conditional E-value: 5.9e-07
      TPR_14   7 laeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 + ++l  lG+pd+Ai +l r+l++ P+dae w +l +
  KHJ30146.1 125 RIALLKSLGRPDQAILALIRLLDTSPNDAENWAELSD 161
                 6788999**************************9987 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.0084
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 +++l +++ a   +++A+ +l+++l   P  + ++ +l++
  KHJ30146.1 156 WAELSDLYVAECMYKQAVFALEELLLISPYAWNIHARLGE 195
                 788999999999************************9997 PP

  == domain 5  score: -2.0 bits;  conditional E-value: 4.7
      TPR_14  19 eAiallrralalaPddae 36 
                 eA++++ r ++l+ d ++
  KHJ30146.1 214 EAMQCFCRSIELCDDYLR 231
                 788999899988887665 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.041        81      31      61 ..      52      83 ..      31      87 .. 0.79
   2 !   19.8   0.1   4.3e-07   0.00086       4      64 ..      98     159 ..      95     162 .. 0.91
   3 !   21.8   0.5     1e-07   0.00021       5      56 ..     133     184 ..     131     193 .. 0.93
   4 ?    5.5   0.0     0.012        24       7      36 ..     169     198 ..     163     201 .. 0.90
   5 ?   -2.3   0.0       3.3   6.7e+03      53      67 ..     287     299 ..     282     301 .. 0.51

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.041
      TPR_19 31 LAeallalgqldeAealLdalpeedpdd.ary 61
                L+  +l +g+ + A a+L++l e +  d +r+
  KHJ30146.1 52 LVHSCLRTGDEKSAFACLQKLTERFGEDnERV 83
                47889*******************99986776 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 4.3e-07
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpdd.aryasL 64 
                 e  ++  l+ +e++l +dp n  +  + + +l +lg++d+A+ +L +l++  p+d +++a L
  KHJ30146.1  98 ERELEKILDEYEAILLKDPTNIPISKRRIALLKSLGRPDQAILALIRLLDTSPNDaENWAEL 159
                 66788889999********************************************7777765 PP

  == domain 3  score: 21.8 bits;  conditional E-value: 1e-07
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedp 56 
                 g++++A+ +l ++l+ +p++ae ++ L ++++a   +++A  +L++l++  p
  KHJ30146.1 133 GRPDQAILALIRLLDTSPNDAENWAELSDLYVAECMYKQAVFALEELLLISP 184
                 89********************************************998765 PP

  == domain 4  score: 5.5 bits;  conditional E-value: 0.012
      TPR_19   7 yaeAlalleqalqedpknaearllLAeall 36 
                 y +A+ +le++l  +p  +++ ++L e+l+
  KHJ30146.1 169 YKQAVFALEELLLISPYAWNIHARLGEVLF 198
                 89***********************99997 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 3.3
      TPR_19  53 eedpddaryasLlAk 67 
                 e+d  +a+ya  lAk
  KHJ30146.1 287 EQDYSTAEYA--LAK 299
                 3444444444..444 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.017        34       6      29 ..      51      74 ..      48      78 .. 0.86
   2 ?    5.2   0.0     0.014        29      10      34 .]     128     152 ..     127     152 .. 0.91
   3 !    7.1   0.3    0.0035         7       1      32 [.     153     184 ..     153     185 .. 0.94
   4 ?    2.3   0.0      0.13   2.6e+02      18      32 ..     213     227 ..     205     229 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.017
                HHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8  6 nlgsiylklgdyeeAkeyyekale 29
                 l + +l +gd ++A ++++k +e
  KHJ30146.1 51 SLVHSCLRTGDEKSAFACLQKLTE 74
                57788999*************987 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.014
                 HHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8  10 iylklgdyeeAkeyyekaleldpdn 34 
                 ++++lg+ ++A+ ++ + l+ +p++
  KHJ30146.1 128 LLKSLGRPDQAILALIRLLDTSPND 152
                 6799*************99999985 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0035
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekaleldp 32 
                 ae +  l+++y     y++A+ ++e+ l ++p
  KHJ30146.1 153 AENWAELSDLYVAECMYKQAVFALEELLLISP 184
                 67899***********************9998 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.13
                 HHHHHHHHHHHHHHH CS
       TPR_8  18 eeAkeyyekaleldp 32 
                  eA++++ + +el  
  KHJ30146.1 213 IEAMQCFCRSIELCD 227
                 59**********965 PP

>> FAT  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   6.4e-07    0.0013     177     294 ..      29     238 ..      11     270 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 6.4e-07
                 TT.........TT.TSSCCCHHHHHHHCCH...HHHHSSCCHHHHCCTSSCCC..............SS-SS---........................ CS
         FAT 177 dp....eewlprappevvyaylKylwssge...qkealqkLreftsellekke..............elqsgleaq....................... 231
                 +p    + w+ +++pe+ ++y  + +s  +    k+a+ +L++ t++  e++e              +                               
  KHJ30146.1  29 SPakylSAWSAKETPELWLTYESLVHSCLRtgdEKSAFACLQKLTERFGEDNErvlaisgvykeavaK-------Derelekildeyeaillkdptnip 120
                 444456677777777665555555554433223899*****999999999999997776666655541.......144444556666777888888899 PP

                 .........................................HH.HHCCCTCCC........................CCCCCCCCT.S...-SSCCHHH CS
         FAT 232 ..............................keptnleeftkll.arcylkkGe........................wqealqkldwseekieeilqsy 275
                                               ++++n++e+++l  a+c+ k++                         ++++  + + +e++i e++q++
  KHJ30146.1 121 iskrriallkslgrpdqailalirlldtspNDAENWAELSDLYvAECMYKQAVfaleelllispyawniharlgevlFMSSSTNYNGREKSIIEAMQCF 219
                 999999999********************************************************************99999999************** PP

                 HCCHHCTCCCHSTTCCCCH CS
         FAT 276 saateidpswykawhtwal 294
                 +++ e++++    ++ ++ 
  KHJ30146.1 220 CRSIELCDDYLRSYYGLKI 238
                 *******999888877655 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.27   5.4e+02      10      30 ..      55      75 ..      54      79 .. 0.85
   2 ?   -1.8   0.1       2.4   4.8e+03      22      34 .]     106     118 ..     105     118 .. 0.85
   3 ?    3.2   0.0     0.059   1.2e+02      11      34 .]     129     152 ..     127     152 .. 0.88
   4 !   10.4   0.5   0.00029      0.57       1      32 [.     153     184 ..     153     186 .. 0.94
   5 ?   -2.9   0.0       5.2     1e+04       3      12 ..     189     198 ..     188     200 .. 0.71
   6 ?   -3.0   0.0       5.5   1.1e+04      19      33 ..     214     228 ..     213     229 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.27
       TPR_2 10 ayyklgdyeeAleafekAlel 30
                ++++ gd + A ++++k  e 
  KHJ30146.1 55 SCLRTGDEKSAFACLQKLTER 75
                67899************8775 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2.4
       TPR_2  22 eafekAleldPnn 34 
                 + +e+ l  dP+n
  KHJ30146.1 106 DEYEAILLKDPTN 118
                 6799999999997 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.059
       TPR_2  11 yyklgdyeeAleafekAleldPnn 34 
                 +  lg++++A+ a+ + l   Pn+
  KHJ30146.1 129 LKSLGRPDQAILALIRLLDTSPND 152
                 5679**********9999999986 PP

  == domain 4  score: 10.4 bits;  conditional E-value: 0.00029
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldP 32 
                 ae + +l ++y +   y++A+ a+e+ l + P
  KHJ30146.1 153 AENWAELSDLYVAECMYKQAVFALEELLLISP 184
                 68899***********************9998 PP

  == domain 5  score: -2.9 bits;  conditional E-value: 5.2
       TPR_2   3 alynlGlayy 12 
                 ++ +lG++++
  KHJ30146.1 189 IHARLGEVLF 198
                 5778888887 PP

  == domain 6  score: -3.0 bits;  conditional E-value: 5.5
       TPR_2  19 eAleafekAleldPn 33 
                 eA ++f +++el+ +
  KHJ30146.1 214 EAMQCFCRSIELCDD 228
                 788999888888765 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.1   2.2e+03      16      24 ..      89      97 ..      86      99 .. 0.74
   2 !    6.0   0.0    0.0049       9.7       5      38 ..     130     163 ..     128     166 .. 0.86
   3 ?    3.4   0.0      0.03        60      10      39 ..     169     198 ..     161     200 .. 0.89
   4 ?    3.3   0.0     0.034        68      12      34 ..     214     236 ..     211     236 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.1
      TPR_11 16 aYkkAlkld 24
                +Yk+A++ d
  KHJ30146.1 89 VYKEAVAKD 97
                588888766 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0049
      TPR_11   5 yeqGkyeeAieaYkkAlkldPdnaeayynLGlay 38 
                  ++G+ ++Ai a+ + l+ +P++ae + +L ++y
  KHJ30146.1 130 KSLGRPDQAILALIRLLDTSPNDAENWAELSDLY 163
                 578999******************9887776665 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.03
      TPR_11  10 yeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 y++A+ a+++ l ++P   +++  LG++++
  KHJ30146.1 169 YKQAVFALEELLLISPYAWNIHARLGEVLF 198
                 8899999999999**************998 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.034
      TPR_11  12 eAieaYkkAlkldPdnaeayynL 34 
                 eA++++ + ++l+ d+ + yy+L
  KHJ30146.1 214 EAMQCFCRSIELCDDYLRSYYGL 236
                 8999*****************97 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.033        66      13      30 ..      55      76 ..      31      79 .. 0.71
   2 ?   -1.5   0.0       2.7   5.4e+03       9      31 ..      95     116 ..      89     118 .. 0.56
   3 ?    6.5   0.0    0.0072        14      10      32 ..     128     151 ..     125     152 .. 0.83
   4 ?   -0.3   0.0       1.1   2.2e+03       9      19 ..     167     172 ..     162     184 .. 0.57
   5 ?   -0.9   0.0       1.7   3.3e+03      13      27 ..     288     301 ..     278     304 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.033
                H....HHHHHHHHHHHHHHHH- CS
       TPR_6 13 l....gdtdkAlealerlikeY 30
                     gd   A + l++l +++
  KHJ30146.1 55 SclrtGDEKSAFACLQKLTERF 76
                055548**************98 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 2.7
                 HHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   9 syrklgdtdkAlealerlikeYP 31 
                 +  +  + +k l+ +e ++ + P
  KHJ30146.1  95 AKDER-ELEKILDEYEAILLKDP 116
                 44444.56666666666665555 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0072
                 HHH.HHHHHHHHHHHHHHHHH-TT CS
       TPR_6  10 yrk.lgdtdkAlealerlikeYPd 32 
                 ++k lg++d+A+ al rl++  P+
  KHJ30146.1 128 LLKsLGRPDQAILALIRLLDTSPN 151
                 344488***************998 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 1.1
                 HHHHHHHHHHH CS
       TPR_6   9 syrklgdtdkA 19 
                 +++k     +A
  KHJ30146.1 167 CMYK-----QA 172
                 4444.....34 PP

  == domain 5  score: -0.9 bits;  conditional E-value: 1.7
                 HHHHHHHHHHHHHHH CS
       TPR_6  13 lgdtdkAlealerli 27 
                 + d+++A  al +li
  KHJ30146.1 288 Q-DYSTAEYALAKLI 301
                 4.9999999999998 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.039        78       2      33 ..     108     139 ..     107     139 .. 0.88
   2 ?    6.2   0.1     0.008        16       4      23 ..     144     163 ..     141     172 .. 0.88
   3 ?   -1.4   0.0         2     4e+03       3      23 ..     177     197 ..     175     207 .. 0.81
   4 ?   -3.1   0.0       7.3   1.4e+04       4      18 ..     221     235 ..     221     236 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.039
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 y+  l +dP+n +    +  ll+++G++++A+
  KHJ30146.1 108 YEAILLKDPTNIPISKRRIALLKSLGRPDQAI 139
                 9999999****999999999999999999985 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.008
      TPR_17   4 kaleldPnnadaynnLAell 23 
                 + l+  Pn+a+ + +L  l+
  KHJ30146.1 144 RLLDTSPNDAENWAELSDLY 163
                 678999**********9888 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 2
      TPR_17   3 lkaleldPnnadaynnLAell 23 
                 ++ l + P  ++ +  L+e+l
  KHJ30146.1 177 EELLLISPYAWNIHARLGEVL 197
                 777888888899999999987 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 7.3
      TPR_17   4 kaleldPnnadaynn 18 
                 +++el+ ++  +y+ 
  KHJ30146.1 221 RSIELCDDYLRSYYG 235
                 689999998888885 PP

>> DUF5344  Family of unknown function (DUF5344)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0    0.0072        14      47      78 ..      78     109 ..      69     118 .. 0.62
   2 ?    6.6   1.6    0.0057        11      11      52 ..     239     280 ..     236     293 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0072
     DUF5344  47 eleeeleellkaYktlllknvedtesaVdslk 78 
                 e +e   ++   Yk+++ k++ + e+ +d+++
  KHJ30146.1  78 EDNERVLAISGVYKEAVAKDERELEKILDEYE 109
                 55666666666666666666666666666654 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0057
     DUF5344  11 VeqkLselktaaeelktsip.etisgknsldvvekineleeel 52 
                 V ++L+ ++++ +++k++++ ++ ++ n+l+++ k++e+++ +
  KHJ30146.1 239 VTNELQAIRNSGNQIKSQLSdQDLKQLNELATL-KLTEISQRI 280
                 899*************87761566777888888.899998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       980  (0.05466); expected 358.6 (0.02)
Passed bias filter:                      656  (0.0365888); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 2204.44
//
Query:       KHJ30147.1  [L=666]
Description: putative kinetoplast-associated protein kap [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (666 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      4017  (0.22405); expected 358.6 (0.02)
Passed bias filter:                      840  (0.0468515); expected 358.6 (0.02)
Passed Vit filter:                       456  (0.0254337); expected 17.9 (0.001)
Passed Fwd filter:                       150  (0.00836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 2.76u 0.42s 00:00:03.18 Elapsed: 00:00:00.63
# Mc/sec: 3190.26
//
Query:       KHJ30148.1  [L=372]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00085   19.3   6.2    0.00085   19.3   6.2    2.4  2  DUF3915          Protein of unknown function (DUF3915)
  ------ inclusion threshold ------
       0.13   12.3  13.3       0.24   11.4  13.3    1.4  1  Trypan_PARP      Procyclic acidic repetitive protein (PARP)
       0.26   11.4  13.3       0.47   10.6  13.3    1.5  1  DUF2052          Coiled-coil domain containing protein (DUF20
       0.54    9.6  16.9       0.95    8.8  16.9    1.6  1  GBP_C            Guanylate-binding protein, C-terminal domain
        1.1    7.4  11.0        1.4    7.2  11.0    1.2  1  CDC45            CDC45-like protein
        2.3    6.2  21.1        2.9    5.9  21.1    1.1  1  AF-4             AF-4 proto-oncoprotein
        2.5    7.7  26.6        5.4    6.6  26.6    1.5  1  DDRGK            DDRGK domain
        4.6    6.9  10.9         11    5.7  10.9    1.6  1  FAM176           FAM176 family
        5.6    6.1   4.6        6.9    5.8   4.6    1.2  1  Zip              ZIP Zinc transporter
        9.7    5.8  18.6         17    5.1  18.6    1.4  1  TAF4             Transcription initiation factor TFIID compon


Domain annotation for each model (and alignments):
>> DUF3915  Protein of unknown function (DUF3915)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3  12.4      0.18   3.3e+02      23      44 ..       4      25 ..       1      27 [. 0.43
   2 !   19.3   6.2   4.7e-07   0.00085      21      69 ..      20      68 ..      19      76 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.18
     DUF3915 23 drerererederekerekkker 44
                ++e+e+e+e+e+eke+ek+ke+
  KHJ30148.1  4 EKEKEKEKEKEKEKEKEKEKEK 25
                3444444444444444444443 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 4.7e-07
     DUF3915 21 drdrerererederekerekkkerhavcnvlasiavgtelsllsikgnv 69
                ++++e+e+e+e+e+eke+ek+ke+++v n+ +++a+ t   +ls   n 
  KHJ30148.1 20 EKEKEKEKEKEKEKEKEKEKEKEKETVNNLPKKVAIATPRIILSQATNR 68
                5789999999999*************************98888776665 PP

>> Trypan_PARP  Procyclic acidic repetitive protein (PARP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4  13.3   0.00013      0.24      70     111 ..       4      45 ..       1      63 [. 0.36

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00013
  Trypan_PARP  70 epepepepepetepeeepepepepepepepepepepepepep 111
                  e e e e e+e+e e+e e+e e e e e e e e e e e 
   KHJ30148.1   4 EKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKET 45 
                  222222222222222222233333333333333333333333 PP

>> DUF2052  Coiled-coil domain containing protein (DUF2052)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6  13.3   0.00026      0.47      74     113 ..       7      54 ..       1     132 [. 0.46

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00026
     DUF2052  74 leaqqeeleeeeeeeeeeeeeeeeeeeeeeedekekaea.........d 113
                  e+++e+ e+e+e+e+e+e+e+e+e+e+e+e+ekek+++          
  KHJ30148.1   7 KEKEKEK-EKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEtvnnlpkkvA 54 
                 1111111.11111111111111111111111111111112233333330 PP

>> GBP_C  Guanylate-binding protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8  16.9   0.00053      0.95     201     254 ..       2      55 ..       1     128 [. 0.85

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00053
       GBP_C 201 akekeieaeqakaeaaeaekelleekqkeeeqrmeakeksleehvkqLkeklee 254
                 + eke+e+e++k+++ e+eke  +ek+ke+e++ e+++++ +e v++L +k   
  KHJ30148.1   2 EMEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKETVNNLPKKVAI 55 
                 678999999999999999999999999999999999999999*****9999764 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2  11.0   0.00076       1.4     133     191 ..       7      43 ..       1     127 [. 0.49

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.00076
       CDC45 133 deedeeeeeeddddeeeeeeeeedeedeeedeeeskkkrksksdeeeesddddersrkr 191
                 +         ++++e+e+e+e+e+e+++e+++e++k+k+k             e+++++
  KHJ30148.1   7 K---------EKEKEKEKEKEKEKEKEKEKEKEKEKEKEK-------------EKEKEK 43 
                 1.........111111111111111111111111111111.............111111 PP

>> AF-4  AF-4 proto-oncoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  21.1    0.0016       2.9     808     940 ..       5     127 ..       1     156 [. 0.43

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0016
        AF-4 808 kkkeskqkskkssskskrkrKseeeaenksdskklr.leketksllsppvissshkesskk..ksskkkseekkkekllppllsplsseskskkpakkr 903
                 k+ke++++++k+++k+k+k+K e+e+e+++++ k +  eket   ++    +++   ++ +   s+++++  +k+ kl+ ++ls+ +s  +       r
  KHJ30148.1   5 KEKEKEKEKEKEKEKEKEKEK-EKEKEKEKEKEKEKeKEKETVN-NL----PKKVAIATPRiiLSQATNRGINKEAKLPITPLSSDNSWAAV-----AR 92 
                 222222222222222223333.2222222222222202222211.11....12222222222223345556666667766665533332222.....23 PP

        AF-4 904 sssessslsqessksaketkssskkssssskhkkseg 940
                 + +++  +  +++  a+ ++s + ++s sskhk ++ 
  KHJ30148.1  93 NGQKKARVTLNNN--AQAASSWKATQSLSSKHKPTKA 127
                 3333333333333..3344455555567777776654 PP

>> DDRGK  DDRGK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6  26.6     0.003       5.4      34      84 ..       5      55 ..       1      68 [. 0.71

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.003
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       DDRGK 34 leekreeerkekeekeeekekkkeeeerkkeeekerkeqeeyeklksefvv 84
                +e+++e+e+++++eke+ekek+ke+e++k++e++++ke+e  ++l +++++
  KHJ30148.1  5 KEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKETVNNLPKKVAI 55
                334444566666777777777777788888888888888888888877766 PP

>> FAM176  FAM176 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7  10.9     0.006        11      56      91 ..       9      44 ..       1      70 [. 0.41

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.006
      FAM176 56 kkkkklkeesekasededeeeeeeeedsseseaeee 91
                k+k+k+ke+++++++++++e+e+e+e+++e+e e+e
  KHJ30148.1  9 KEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE 44
                111111111111122222222222222222222222 PP

>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   4.6    0.0038       6.9     136     175 ..       7      42 ..       1     133 [. 0.62

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0038
         Zip 136 eekedhvaeadtdadskeelrngkqeksesekeqaseeed 175
                 +eke++++++++++++ke+++++++ek+++++++    ++
  KHJ30148.1   7 KEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE----KE 42 
                 2222221111111111111111111111111111....11 PP

>> TAF4  Transcription initiation factor TFIID component TAF4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  18.6    0.0094        17     124     210 ..       6     109 ..       1     148 [. 0.45

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0094
        TAF4 124 qkekeeeekrqakRieereglekaakdrskgedeeekklkaketakevq........keedekarhraANatAlaavg.............eprkKkys 201
                 +keke+e+ ++    +e+e+ ++++k+++k++++e++k+k+ket +++         + +  +a +r  N  A++ +              + +kK + 
  KHJ30148.1   6 EKEKEKEKEKE----KEKEKEKEKEKEKEKEKEKEKEKEKEKETVNNLPkkvaiatpRIILSQATNRGINKEAKLPITplssdnswaavarNGQKKARV 100
                 22222222222....244444444445555555555555555555442211113344445555555555666666665555555555555222223222 PP

        TAF4 202 wmsagsgsg 210
                 + ++++++ 
  KHJ30148.1 101 TLNNNAQAA 109
                 222222221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2885  (0.160912); expected 358.6 (0.02)
Passed bias filter:                     1283  (0.07156); expected 358.6 (0.02)
Passed Vit filter:                       468  (0.026103); expected 17.9 (0.001)
Passed Fwd filter:                        85  (0.00474092); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.01u 0.36s 00:00:01.37 Elapsed: 00:00:00.46
# Mc/sec: 2443.95
//
Query:       KHJ30149.1  [L=633]
Description: hypothetical protein EV44_g5291 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (633 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2866  (0.159853); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.96u 0.34s 00:00:01.30 Elapsed: 00:00:00.51
# Mc/sec: 3704.42
//
Query:       KHJ30150.1  [L=578]
Description: putative anion exchange family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.9e-84  282.3  20.4    5.9e-44  150.8   8.3    2.1  2  HCO3_cotransp  HCO3- transporter family
  ------ inclusion threshold ------
       0.48   10.3   2.9       0.51   10.2   0.5    2.2  2  Pam17          Mitochondrial import protein Pam17


Domain annotation for each model (and alignments):
>> HCO3_cotransp  HCO3- transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.8   8.3   6.5e-48   5.9e-44       5     181 ..      17     193 ..      14     199 .. 0.96
   2 !  138.0   5.4   4.8e-44   4.3e-40     245     508 .]     190     464 ..     182     464 .. 0.90

  Alignments for each domain:
  == domain 1  score: 150.8 bits;  conditional E-value: 6.5e-48
  HCO3_cotransp   5 grlfgGLveDikrrlplYlsDftdalnlqclasvlFlYfaclspaitFGgLlgeategaigvseslvsaaisgilfalfagqpllilgstgPllvf 100
                     +lf G++eD++rrlp+Y+sD++da   +++ ++l++Yfa+++pa++F+  + ++t+  +gv e+lv+  ++ ++f+l+a+qpl+i+g tgP+ vf
     KHJ30150.1  17 IHLFSGMIEDVRRRLPFYWSDWKDAWDYRVIPATLYIYFANILPALAFSLDMFTKTNMIFGVNEVLVASILGSVIFSLLAAQPLVIVGVTGPITVF 112
                    579********************************************************************************************* PP

  HCO3_cotransp 101 ekilykfckelgldylslrvwiglwlalillilvatdasalvkyitrfteeifallIslifiyealkkllkifkkyplnlk 181
                    + ++y++   +g dyl +   iglw +l+  il++t+ + l+ky+t+f  +if +++++i++ + ++ l++ + + p++l+
     KHJ30150.1 113 NYMVYHIMLPTGTDYLPFMGLIGLWSMLMHWILAITNSCNLLKYVTKFSCDIFGFYVAFIYLQKGIQVLTQQTGDGPFYLS 193
                    *****************************************************************9999998888777665 PP

  == domain 2  score: 138.0 bits;  conditional E-value: 4.8e-44
  HCO3_cotransp 245 allsliLflgtfllalfLkkfkksrflptkvRelisDfavliailvmvl...vdvllgvetpklevpeefkptsekrgwlinpleknpwwlvlaav 337
                    + ls++ +l  ++++++   + +s+ +++++R++i D++ ++++++++    ++ + +++ ++l  +++f pt ++r+w++ ++ ++ +  v++a+
     KHJ30150.1 190 FYLSIVTALLVLIVGYICGVIGTSSIFQHHIRRFIEDYGTPLTLIFFTGfvqIGRMQEISLKTLPTSKSFLPT-TERSWFV-QFWNVTVIDVFVAI 283
                    67999999999********************************9997641115666669999999999****8.56*****.788999******** PP

  HCO3_cotransp 338 lpallvtiLifmdqqitavivnrkenkLkKgsgyhlDLlvvavlilvlsllGlPwlvaatvlsitHvnslkvesetsapG..e......kpkilgv 425
                      a+l+tiL++ d++++++i + +e  L+K +g+h+D++++++++++ ++lG+P+  + +++++ H ++l v++++ +    +      ++k+ +v
     KHJ30150.1 284 PFAILLTILFYFDHNVSSLIAQDTEYPLRKPAGFHWDIFLLGITTGISGILGIPFPNGLIPQAPFHTRALCVTQSCFDSVqdNskkihgTKKFSHV 379
                    **********************************************************************9998875543111111111468999* PP

  HCO3_cotransp 426 rEqRvtgllvfiliglsvl..ltpvlklIPmpVLyGvFLYmgvtsLkgiqlfdRilLllmpakhqpdtiYlrkvplrkvhlFTli 508
                     EqRv++l+  +l+ +++   + ++l+lIP  VL G+F+ mgv +L+++ ++ ++l l+ +       + l +++  k+  FTli
     KHJ30150.1 380 VEQRVSNLAQGLLTLATMTqpFLEILHLIPQGVLAGLFFVMGVKALEENGITHKFLYLIKDRTFTTSSESLINIRRSKIWQFTLI 464
                    ***********99999988778999**********************************************************97 PP

>> Pam17  Mitochondrial import protein Pam17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.17   1.5e+03      38      56 ..      96     114 ..      69     148 .. 0.47
   2 ?   10.2   0.5   5.7e-05      0.51      32     104 ..     152     223 ..     138     229 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.17
       Pam17  38 asivtallglllgaavlst 56 
                 a  +  ++g++  ++v++ 
  KHJ30150.1  96 AAQPLVIVGVTGPITVFNY 114
                 2222333333333333333 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 5.7e-05
       Pam17  32 rrielvasivtallglllgaavlstleidptqqilglDplvvlglatlasgalGwllGpvlgsavfkllnrkk 104
                 + ++ v+   + ++g+++++ +l++  i+ ++q +g  p+++  ++ l + ++G+++G +  s++f+   r+ 
  KHJ30150.1 152 NLLKYVTKFSCDIFGFYVAFIYLQK-GIQVLTQQTGDGPFYLSIVTALLVLIVGYICGVIGTSSIFQHHIRRF 223
                 5566777788889999999999998.566655556************************99999**9877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (578 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       631  (0.0351944); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4072.24
//
Query:       KHJ30151.1  [L=264]
Description: putative mating-type protein mat a-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-13   49.8   2.2    3.5e-13   49.8   2.2    1.9  2  HMG_box         HMG (high mobility group) box
    6.5e-06   26.6   0.6    1.2e-05   25.8   0.6    1.4  1  HMG_box_2       HMG-box domain
  ------ inclusion threshold ------
      0.034   14.5   0.5      0.072   13.4   0.3    1.6  1  Gp-FAR-1        Nematode fatty acid retinoid binding protein 
      0.044   14.3   0.7       0.13   12.8   0.1    1.9  2  Ccdc124         Coiled-coil domain-containing protein 124 /Ox
        3.3    8.1  11.2        1.6    9.1   2.5    2.7  3  Lipoprotein_17  Lipoprotein associated domain


Domain annotation for each model (and alignments):
>> HMG_box  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.8   2.2   9.8e-17   3.5e-13       2      69 .]      85     152 ..      84     152 .. 0.98
   2 ?   -1.2   0.1      0.77   2.7e+03      13      26 ..     159     172 ..     157     181 .. 0.69

  Alignments for each domain:
  == domain 1  score: 49.8 bits;  conditional E-value: 9.8e-17
                 -SS--HHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     HMG_box   2 kRplsafflfskeqraklkaenPelknaeiskklgekWkalseeeKkkYeekaekekaryekekpeyk 69 
                  +p +a+++f++e+  k++a+  +l+ +e sk ++++Wk+ +++ K+ Y   a keka   +++p+y+
  KHJ30151.1  85 RKPRNAWIIFRQEMMVKFRAQIGHLHTSEQSKVISKMWKKTPRHTKEFYTTLAHKEKADLLAQYPNYR 152
                 69*****************************************************************6 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.77
                 HHHHHHHHHHSTTS CS
     HMG_box  13 keqraklkaenPel 26 
                 +e r+ +k + P++
  KHJ30151.1 159 SEIRKRIKNKYPSN 172
                 67788888888764 PP

>> HMG_box_2  HMG-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.6   3.4e-09   1.2e-05       5      65 ..      85     144 ..      83     152 .. 0.92

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 3.4e-09
                 -SS--HHHHHHHTTHHHHHHHT---SSHHHHTGGGHHHHHHS-HHHHHHHHHHHHHHHHHH CS
   HMG_box_2   5 kaarnAYalfvqemipelkrkGnpviglaevsklcsekWkalseeeKekYeekAkedkkry 65 
                 + +rnA+++f qem  + +++       +e sk +s+ Wk  + + Ke Y   A + k++ 
  KHJ30151.1  85 RKPRNAWIIFRQEMMVKFRAQ-IGHLHTSEQSKVISKMWKKTPRHTKEFYTTLAHKEKADL 144
                 5689*****************.999*******************************99976 PP

>> Gp-FAR-1  Nematode fatty acid retinoid binding protein (Gp-FAR-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.3     2e-05     0.072       8      56 ..     126     175 ..     119     216 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2e-05
    Gp-FAR-1   8 Psevvealknltdeekaqlkevvknykg.yknedellaalKkkspaLyek 56 
                 P+  +e+++ l ++eka+l     ny+  ++   e+ + +K+k+p+  ++
  KHJ30151.1 126 PRHTKEFYTTLAHKEKADLLAQYPNYRVqPRKSSEIRKRIKNKYPSNLTT 175
                 9999*********************7766****************86555 PP

>> Ccdc124  Coiled-coil domain-containing protein 124 /Oxs1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   3.7e-05      0.13      78     124 ..      81     127 ..      69     128 .. 0.90
   2 ?   -0.9   0.1      0.61   2.2e+03      21      43 ..     159     181 ..     134     201 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.7e-05
     Ccdc124  78 rhpekrlkAaYkafeeeeLprlkeenpgLrlsQlkqllkkewkkspe 124
                  h  ++ + a+  f +e++ +++++   L  s   ++++k+wkk p 
  KHJ30151.1  81 SHHIRKPRNAWIIFRQEMMVKFRAQIGHLHTSEQSKVISKMWKKTPR 127
                 577799999***********************************995 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.61
     Ccdc124  21 kekkkakkkeveekeleenvnrl 43 
                 +e +k+ k+++ ++  ++n+n+ 
  KHJ30151.1 159 SEIRKRIKNKYPSNLTTQNLNQW 181
                 34445555555555555666654 PP

>> Lipoprotein_17  Lipoprotein associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       2.6   9.4e+03      40      47 ..      22      29 ..      16      56 .. 0.55
   2 ?    9.1   2.5   0.00046       1.6      15      32 ..     163     192 ..     152     216 .. 0.62
   3 ?    4.6   0.3     0.012        42       6      29 ..     217     240 ..     209     262 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 2.6
                    TTTEEEEE CS
  Lipoprotein_17 40 kngvsfsi 47
                    kn+++ ++
      KHJ30151.1 22 KNSIQAVF 29
                    33333333 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00046
                     E..ETTSTT--GGGS-HHH...........E CS
  Lipoprotein_17  15 k..kntLPSevtnsnlknd...........n 32 
                     k  kn+ PS++t +nl n+            
      KHJ30151.1 163 KriKNKYPSNLTTQNL-NQwildngvqlrsA 192
                     2459************.67777654444332 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.012
                     TT--BTTTEEETTSTT--GGGS-H CS
  Lipoprotein_17   6 knlelknnakkntLPSevtnsnlk 29 
                     +++ + +n++ n LPS ++ s++ 
      KHJ30151.1 217 DTIHIQSNNFRNSLPSRISPSKIL 240
                     5677888889*********99995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       857  (0.0477997); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2095.80
//
Query:       KHJ30152.1  [L=363]
Description: putative ribonuclease h2 subunit a protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-49  168.3   0.0    2.7e-48  164.5   0.0    2.0  1  RNase_HII  Ribonuclease HII


Domain annotation for each model (and alignments):
>> RNase_HII  Ribonuclease HII
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.5   0.0   1.5e-52   2.7e-48       1     197 [.      81     309 ..      81     310 .. 0.88

  Alignments for each domain:
  == domain 1  score: 164.5 bits;  conditional E-value: 1.5e-52
                 EEEEEE-TT-SBS-EEEEEEEECGHHHHHH..HCTTGTTGTTS-HHHHHHHHHHHH..............SEEEEEEE-HHHHH.HHTTTS-HHHHHHH CS
   RNase_HII   1 iGiDEaGrGpvlGplvvaavavekereeel..kklgvkDSKkLskqkreeLaklik..............kkiekrklvaeeikyaseneinlneikaa 83 
                 +G+DEaGrGpvlGp+v+ a++++    ++l  k  +++DSK+L++  r+ L ++++              + +++r+++++++k  +  ++nln ++ +
  KHJ30152.1  81 LGVDEAGRGPVLGPMVYGAFYLPVSLSDFLlrKTHQFDDSKNLTHTVRSDLMRKVCtegtdlyehcgwavEVMSARDISSNMMK--PGVSYNLNAQAMD 177
                 6************************99965324578*******************************99989999999999998..899********** PP

                 HHHHHHHHHHHTCEECCECCCE--SSHHHHHHHHHHHHC.CEEEEETTGGGT-HHHHHHHHHHHHHHHHHHHHHHHHC....S.H.-..........-T CS
   RNase_HII  84 ltlaviklleklgvkvdeilvdgvttpeslkkkleqiik.ikvtvekkadekyllvaaASiiAkverdeelellkrkp....g.tld..........kg 166
                 +t+ +i++++++gv+++ei++d++++pe ++kkle+i++ ik+tv+kkad+++++v+aAS++Akv+rd  lell +++    + ++d          +g
  KHJ30152.1 178 ATIGLINQIHNKGVNLKEIYIDTIGKPETYQKKLEAIFPnIKITVSKKADSLFPCVSAASVCAKVTRDAALELLYENYlkekElGEDfvqseiaedsWG 276
                 ********************************************************************999876543311112222222222233338* PP

                 TSSTTSHHHHHHHHHHHHH..S--TTB-TTSHH CS
   RNase_HII 167 sGyasdektrallkkgats..klpdivrlsfkt 197
                 sGy+sd k + +l+k++ +     +  r+s++t
  KHJ30152.1 277 SGYPSDVKCSTWLRKNMHPlfGWGSECRFSWAT 309
                 *******************99888889****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2856.68
//
Query:       KHJ30153.1  [L=203]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1268  (0.0707234); expected 358.6 (0.02)
Passed bias filter:                      573  (0.0319594); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1611.86
//
Query:       KHJ30154.1  [L=174]
Description: hypothetical protein EV44_g3883 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.093   12.9   0.0       0.13   12.4   0.0    1.2  1  BATS        Biotin and Thiamin Synthesis associated domain
       0.14   12.1   0.0       0.25   11.3   0.0    1.4  1  UnbV_ASPIC  ASPIC and UnbV


Domain annotation for each model (and alignments):
>> BATS  Biotin and Thiamin Synthesis associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.5e-05      0.13      24      65 ..      79     139 ..      72     168 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.5e-05
                 STTSE.CCCTCHH-HHHHHHHHHCCT--EEE-C---TTTGGG..................S CS
        BATS  24 lPkag.illsgResaefrdqlllklGansisagsktevggya..................f 65 
                 +P+++  ++sgR s +    ++l  Ga +is+ ++ +   y+                  f
  KHJ30154.1  79 IPQSEnFIISGRYSTKIFHGIMLDTGAAKISTAVHKQAQAYTsefggdidtptigsltahF 139
                 577777**************999*********99888888877766666666666666664 PP

>> UnbV_ASPIC  ASPIC and UnbV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.8e-05      0.25      30      51 ..     134     155 ..     132     166 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.8e-05
  UnbV_ASPIC  30 dprlhFGLGkatkidsvevrWp 51 
                 ++++hFG+Gk++   ++e+ +p
  KHJ30154.1 134 SLTAHFGIGKSSSLGTLEINFP 155
                 6899***************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1414.31
//
Query:       KHJ30155.1  [L=1082]
Description: putative protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.1e-72  241.6   0.0    1.5e-71  240.9   0.0    1.3  1  Pkinase         Protein kinase domain
    1.6e-35  122.6   0.0    4.3e-35  121.2   0.0    1.6  1  Pkinase_Tyr     Protein tyrosine kinase
     0.0066   15.8   0.0      0.022   14.1   0.0    1.9  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0093   15.3   0.0      0.018   14.4   0.0    1.4  1  Kinase-like     Kinase-like
  ------ inclusion threshold ------
       0.71    8.6   0.0       0.71    8.6   0.0    3.9  2  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.9   0.0   4.2e-75   1.5e-71       5     264 .]     721    1002 ..     718    1002 .. 0.96

  Alignments for each domain:
  == domain 1  score: 240.9 bits;  conditional E-value: 4.2e-75
                  EEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH.HHSS--HHHH CS
     Pkinase    5 eklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladlle.rkgslseeea 100 
                  + +G+G++GkV+kav+  t+k vA+Kki+ e +++    +++rEik+l++lkh+niv+l ev+ ek++ ++v+ey++++ l+ ll+    +l+++  
  KHJ30155.1  721 SVVGSGTYGKVFKAVHIYTRKLVALKKIRMEGERDGFPVTAVREIKLLQSLKHKNIVNLQEVMVEKNDCFMVFEYLSHD-LTGLLNhPTFKLDPSYK 816 
                  689**************************************************************************77.99999955666****** PP

                  HHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS..BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHSS CS
     Pkinase  101 kkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk..ltsfvgtseYlAPEvl.keneyskkvDvWslGvilyelltgk 194 
                  k++a+q++egl+ylH++g++HrD+K +NiL++++g lKitDFGla+ + ++ +  +t++v+t +Y++PE+l +e++y+++vD+Ws++++l+e++t++
  KHJ30155.1  817 KHLAYQLFEGLDYLHRRGVLHRDIKAANILVSNEGLLKITDFGLARFYAKRRQldYTNRVITIWYRSPELLlGETQYGPAVDIWSAACVLIEIFTRH 913 
                  **************************************************99999****************9************************* PP

                  -STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS........................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase  195 ppfsgekgkekvekeldqlekilkilg.etkeklpeasei........................seeakdllkkllkkdpkkRltaeellqhpyl 264 
                   +f+g+ g      e+ qle+i+ ilg ++k+++p   ++                         +ea +ll+ ++++dp kR++a+e+l+h+y+
  KHJ30155.1  914 AIFPGDGG------EISQLENIYAILGtPNKFDWPGLVDMawfellrpntrkpnvfaekyrdrvTPEAFKLLQAMFQYDPAKRPSASEVLEHSYF 1002
                  ****5444......7899999******9899*****9999******************************************************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.2   0.0   1.2e-38   4.3e-35       5     257 ..     721     998 ..     719     999 .. 0.86

  Alignments for each domain:
  == domain 1  score: 121.2 bits;  conditional E-value: 1.2e-38
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH.HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSB CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlkeeateee.keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekeklt 101
                  + +G+G++GkV+++        ++  Va+K+++ e +++      ++e+k++++lkh+niv+l  v+++++  ++v+ey+++ dL   L++  + kl+
   KHJ30155.1 721 SVVGSGTYGKVFKAVHI----YTRKLVALKKIRMEGERDGfPVTAVREIKLLQSLKHKNIVNLQEVMVEKNDCFMVFEYLSH-DLTGLLNHP-TFKLD 812
                  679***********999....78999******87666665488999**********************************98.9***99998.***** PP

                  HHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHH.HSEEEHHHHHHHHHHHHHHH CS
  Pkinase_Tyr 102 lkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslk.ekkftsksDvWsfGvllwEi 198
                   + + ++a+q+ +G++yL+++ ++Hrd+ a N+L+s++ + ki+DfGLar    + ++ + +++ + + + +pE l  e+++  + D+Ws + +l+Ei
   KHJ30155.1 813 PSYKKHLAYQLFEGLDYLHRRGVLHRDIKAANILVSNEGLLKITDFGLARFY-AKRRQLDYTNRVITIWYRSPELLLgETQYGPAVDIWSAACVLIEI 909
                  **************************************************88.777777889999999999***9761566***************** PP

                  HTTSSGT........................TTTSHHHHHHHHHHTTEE......S-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 199 ftlgesp........................ypglkneevleklkegkr......lekpekcpeelyelmkkcweedpeeRptfselve 257
                  ft  +                          +pgl ++  +e l+ ++r       +  + +++e  +l++  +++dp++Rp+ se++e
   KHJ30155.1 910 FTRHAIFpgdggeisqleniyailgtpnkfdWPGLVDMAWFELLRPNTRkpnvfaEKYRDRVTPEAFKLLQAMFQYDPAKRPSASEVLE 998
                  **766434888999999999999999999997888777777777776662222212235667888889999999999999999888765 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   6.2e-06     0.022      56     155 ..     759     851 ..     706     869 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 6.2e-06
         Kdo  56 travrEfrllkrLeeagvavpkpvaagavkvgleyrAlllterlegaqdLedllakwae..laeelkrallkavgrliaklhragvnHadlyaknillq 152
                  +avrE++ll+ L+++ +  ++ v+ + +        +++ e l +  dL+ ll++  +  l+ + k++l  ++      lhr+gv H+d+ a nil+ 
  KHJ30155.1 759 VTAVREIKLLQSLKHKNIVNLQEVMVEKN------DCFMVFEYLSH--DLTGLLNH-PTfkLDPSYKKHLAYQLFEGLDYLHRRGVLHRDIKAANILVS 848
                 57899999999999999988888876543......46888888875..89888885.4458999**********************************9 PP

         Kdo 153 qee 155
                 +e+
  KHJ30155.1 849 NEG 851
                 987 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0     5e-06     0.018     129     200 ..     798     870 ..     758     906 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5e-06
  Kinase-like 129 kvlqkrset.hkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvl 200
                  + l    +   +kl    ++ l  ql     +L+ +g++h ++++ n+l  ++g l++++f+  + + ++ +l
   KHJ30155.1 798 HDLTGLLNHpTFKLDPSYKKHLAYQLFEGLDYLHRRGVLHRDIKAANILVSNEGLLKITDFGLARFYAKRRQL 870
                  444444444567778888889999999999*******************************866656655555 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -27.2  31.9         5   1.8e+04     209     277 ..      11      84 ..       1     281 [. 0.66
   2 ?    8.6   0.0    0.0002      0.71     318     342 ..     826     849 ..     821     899 .. 0.78

  Alignments for each domain:
  == domain 1  score: -27.2 bits;  conditional E-value: 5
  Pkinase_fungal 209 edveekdddiaeiRkgldvtka.ekfrskrkvvsssssqe.....lsskaevklkksesskkvekrsvdssvsts 277
                     ++v  ++++ +++ ++ d  +a ++f  +rk+ s +++++     + +++  +++ks+s ++++++  d+s +++
      KHJ30155.1  11 RHVA-MKESRSHVEDRRDRGRAdRSFPGSRKARSPIPHWQegdrtSAKTRDRSPTKSKSTSQRTHKPRDRSYERR 84 
                     4443.4444466666666666666777777766666666644333222222222222222222222222222111 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0002
  Pkinase_fungal 318 ghrsLflkagiLHrDiSenNilitd 342
                     g+  L+   g+LHrDi + Nil+ +
      KHJ30155.1 826 GLDYLH-RRGVLHRDIKAANILVSN 849
                     677899.99*************983 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1082 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1439  (0.080261); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.02u 0.33s 00:00:01.35 Elapsed: 00:00:00.51
# Mc/sec: 6418.87
//
Query:       KHJ30156.1  [L=1037]
Description: putative required for hyphal anastomosis [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.3e-165  551.2   4.4   2.3e-165  551.2   4.4    1.5  2  DUF3402   Domain of unknown function (DUF3402)
    3.8e-75  252.8   2.4    3.8e-75  252.8   2.4    1.6  2  N1221     N1221-like protein
     0.0057   17.0   1.5      0.019   15.3   0.1    2.5  2  TbpB_C    C-lobe handle domain of Tf-binding protein B


Domain annotation for each model (and alignments):
>> DUF3402  Domain of unknown function (DUF3402)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1      0.58   3.5e+03      33      74 ..     145     216 ..     138     229 .. 0.42
   2 !  551.2   4.4  3.8e-169  2.3e-165       1     462 []     513    1009 ..     513    1009 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.58
     DUF3402  33 kfergweedd..eeedddleeltleekee............................eeeevdegpkkeels 74 
                 kfer+w++    +  ++dl+e +   ++e                             ++++d++++++e +
  KHJ30156.1 145 KFERQWKKFGkkSWLESDLSEQRRFLEKEiegllalklsrrckslqtilhvilgvwhVTAQADYKKESSEAK 216
                 566666654422112223333322221113445555555555555555555555544222333333332222 PP

  == domain 2  score: 551.2 bits;  conditional E-value: 3.8e-169
     DUF3402    1 PasilEAgelfskrvrmtramrqlweerekflkfergweeddeeedd.........................dleeltleekee............. 59  
                  P+si+EAge++++r+rmtr+ rqlweerek++k ergw+++d+e +d                         d                        
  KHJ30156.1  513 PKSIIEAGEIYAQRMRMTRSLRQLWEEREKYMKSERGWDTSDNEIEDeievsnldfislndiegldidsiilD----------Sistqnknttqknl 599 
                  9**************************************9995555558888888888887777755555441..........03334444455565 PP

     DUF3402   60 eeeevdegpkkeelseeekkrleavekfYkeaLphLqslvivllklilanvtalvtqqskakeqsinilaaelseeeelseksasgreknk...kkg 153 
                  e ++ d gpk+e  s+e+ ++le +ek Yk++Lp+Lqslvivllk++   v++++tq+ +a ++si    +e + + + +++++ ++++n+     g
  KHJ30156.1  600 EINSLDCGPKTE-VSDEILRKLELIEKTYKNSLPQLQSLVIVLLKALWICVPNILTQS-HAPHHSIAAGPKEVNLRINGHHTHNISQDSNSiplL-G 693 
                  778889999996.889999***********************************9985.555555444433333332222222222222223433.3 PP

     DUF3402  154 .eakelskeeldaartrEitlkAvsgillllLKwfklshvlkfeyltqlLldsnylpLvlklfahqdvqqvveskndreelsFFqfcnlrskekeke 249 
                   e+++   eel+  r rEit kAvs+illl LKwfk+sh+lkfey+tqlLldsnylpLvlk+fahqd+++++++k+d++++sFF fcn +s ++ +e
  KHJ30156.1  694 iESSDFVLEELETFRLREITIKAVSAILLLFLKWFKVSHILKFEYITQLLLDSNYLPLVLKVFAHQDTDKHTKNKTDKDDMSFFAFCNANSLNSGEE 790 
                  36669**************************************************************************************998777 PP

     DUF3402  250 eseseeeeeeeseddaapppikrkrssekaeeeeee............eeeeeeatrpevdelgyPvnplpeepitdfswrnffslinlLrilqkic 334 
                  e +   ++e +sed+a+pppik + +++   +++              ++++++++ p+v+ l    ++  ++   +fswr +fs+inlLr++qkic
  KHJ30156.1  791 ELSVLPDTE-NSEDEAVPPPIKNNSNQNIVMDTH-GllpslkfedgkdTNKRQNPESPDVSHL---KTESCQDNFCEFSWRSLFSTINLLRVMQKIC 882 
                  777766665.7************96666444444.2699***999555455555555555554...55666778999******************** PP

     DUF3402  335 knkahRnllLvqyksseiLkkaLkvpqpeLrlytLKllKnqvpYcGrkWrqsNMrvitaiYlhcrpeLrDdWlagsdvdaeveealplEqaLrglth 431 
                  knk+hRnllLvqykss+iLk++L+ pq + r+ytLKllKnqvp+ GrkWrq NMrvitaiYlhcrpeLrDdWlag d++a+ve+alplEqaLr+lth
  KHJ30156.1  883 KNKTHRNLLLVQYKSSQILKRILRLPQSDVRMYTLKLLKNQVPFYGRKWRQGNMRVITAIYLHCRPELRDDWLAGCDINADVEDALPLEQALRALTH 979 
                  ************************************************************************************************* PP

     DUF3402  432 wfnlrrYpdkmaaeeraalreeqdffkrele 462 
                  w+n+++Yp++m + ++++ +   dff +ele
  KHJ30156.1  980 WYNVKHYPNQM-GVDTKLFSTYFDFFIHELE 1009
                  ***********.999**************98 PP

>> N1221  N1221-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  252.8   2.4   6.3e-79   3.8e-75       4     289 .]     112     405 ..     109     405 .. 0.92
   2 ?   -3.5   0.2      0.75   4.5e+03      31      58 ..     532     558 ..     523     568 .. 0.52

  Alignments for each domain:
  == domain 1  score: 252.8 bits;  conditional E-value: 6.3e-79
       N1221   4 dFeykdsdsleeEldeWFsys..dvvlllkakkaFeskweevseeeeeWedvdederkkfverllesless.dkaRlealeallYialGtwge...... 93 
                  F+y+d+  +e+E++eWFsy+  ++ +ll +k+ Fe++w+++   +++W ++d +e+++f+e+ +e+l     ++R+++l+++l+++lG+w+       
  KHJ30156.1 112 VFTYEDTAAFEDEINEWFSYTdtEYRRLLLIKEKFERQWKKF--GKKSWLESDLSEQRRFLEKEIEGLLALkLSRRCKSLQTILHVILGVWHVtaqady 208
                 59*******************9999*****************..7899********************9773555************************ PP

       N1221  94 ........tkstseqleaikenvkllreagglealwealkkafekeredsedekkaeeqqlqeesselallltilYllvevareeseddeelreellel 184
                          k ++++le+ik++++ll+e+gg+++l+++lk+  +k  ++   e + +e++l   + e+  + ti+Yl++e +r+  ++++ + ++l+ +
  KHJ30156.1 209 kkesseakNKVSKQHLEHIKRGIDLLAECGGIPILFDILKNSLNKISKEGYPECPFQENELPYFQIEIESVATIFYLVIEGVRNYASEMKFAHKSLTLI 307
                 *******9999***********************************99995555555677777788******************877777777777777 PP

       N1221 185 epnllqflveliaklrwddakslplkkillLlwKllLlvfGgteelkevkkalrelhglseeskekekkplitasPldYhaFrqeitskYPaynppepl 283
                  ++ll++l++l+a lrwd++ ++p++killLlwK++Ll++Gg +e  ++kka+ e+++    ++   ++++i+asPldYh+Frqei+skYPay+pp+pl
  KHJ30156.1 308 ASDLLDYLIKLTASLRWDESHHFPQTKILLLLWKSILLTLGGVSEAITLKKAVCEKSQ----ED---SESIISASPLDYHIFRQEIISKYPAYIPPQPL 399
                 *******************************************************332....23...3468**************************** PP

       N1221 284 lpleae 289
                 +ple++
  KHJ30156.1 400 VPLEPD 405
                 ***987 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 0.75
       N1221  31 kakkaFeskweevseeeeeWedvdeder 58 
                 + ++ +e++ + + ++e+ W+++d++ +
  KHJ30156.1 532 SLRQLWEEREKYM-KSERGWDTSDNEIE 558
                 3444455554443.56666777655543 PP

>> TbpB_C  C-lobe handle domain of Tf-binding protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.45   2.7e+03      13      54 ..     560     601 ..     550     624 .. 0.66
   2 !   15.3   0.1   3.2e-06     0.019      12      68 ..     726     781 ..     715     802 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.45
                 -SSEEE-B..--S-TTEEEETTEEEES-------EEEEEE---- CS
      TbpB_C  13 klekkeld..nFgnaakLvidgkeipLlpedttaktefiktvek 54 
                 ++e+++ld  + ++++ L id++ ++ +++  ++k++++k++e+
  KHJ30156.1 560 EIEVSNLDfiSLNDIEGLDIDSIILDSIST--QNKNTTQKNLEI 601
                 556666663345678888899998888888..444444444443 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 3.2e-06
                 T-SSEEE-B--S-TTEEEETTEEEES-------EEEEEE----------EEEEEE-T CS
      TbpB_C  12 kklekkeldnFgnaakLvidgkeipLlpedttaktefiktvekekkkkklkvevccs 68 
                 k ++++++ +F+++++L++d++ +pL+ +   a+++++k+ +++ +k+ ++  ++c+
  KHJ30156.1 726 KWFKVSHILKFEYITQLLLDSNYLPLVLK-VFAHQDTDKHTKNKTDKDDMSFFAFCN 781
                 568899999********************.888888888888888888888888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1037 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.74u 0.29s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 6963.24
//
Query:       KHJ30157.1  [L=555]
Description: putative general amino acid permease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   3.4e-139  464.5  38.7   4.2e-139  464.2  38.7    1.0  1  AA_permease    Amino acid permease
      1e-39  136.6  43.4    1.3e-39  136.3  43.4    1.0  1  AA_permease_2  Amino acid permease
  ------ inclusion threshold ------
      0.073   13.6   0.0       0.14   12.7   0.0    1.4  1  Pet100         Pet100
        3.1    8.1   5.6        3.1    8.1   3.1    2.1  2  DUF575         Protein of unknown function (DUF575)


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  464.2  38.7  9.4e-143  4.2e-139       1     472 [.      43     505 ..      43     507 .. 0.97

  Alignments for each domain:
  == domain 1  score: 464.2 bits;  conditional E-value: 9.4e-143
  AA_permease   1 hvlvialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpelGfviGlnylfswitvlaleltaas 98 
                  h+++ia+gg iG+glfvg+gv+ls++Gp+++++ ++++g++++l++++lge+a+++p++g+fy+y++rf++p +Gf++G+ny ++w++vl++elt+a+
   KHJ30157.1  43 HMQMIAIGGSIGAGLFVGSGVALSSGGPGALVVDFIIIGLMLLLTVNALGELACMYPVAGSFYNYSARFIDPGWGFAMGWNYSMNWLIVLPFELTTAG 140
                  99************************************************************************************************ PP

  AA_permease  99 iliqfw....el.vtdlpkawvtgavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkga...gfrflgdngsifknnlpp 188
                  i+i fw    ++ +++++   +++++fl+ +++in++gvk+yge+ef+l ++k+iaii+fii+gii+ +gg p++ +   g+++++++g+     + +
   KHJ30157.1 141 ITIAFWtdpnGTgTPSIN-VGIWITIFLISICVINIFGVKGYGEVEFVLGMVKVIAIIGFIILGIIIDCGGVPTDNRgyiGAKYWHEPGA-----FRN 232
                  ******333323334444.6777*******************************************************************.....*** PP

  AA_permease 189 gfakeeegafknfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasa..aspfvifikesg 284
                  g        fk+f+svfv+++faf G+e+v+++++E+++P+ksiPka++qv++ri++fY++sl+++gl+vp ++ +l ++s  a   spfv+ +k +g
   KHJ30157.1 233 G--------FKGFCSVFVTAAFAFGGTEMVGLASAEAANPRKSIPKATKQVFWRIALFYIISLFILGLIVPSDNSSLSKASDGAtrFSPFVLSFKLAG 322
                  *........*****************************************************************999986655589************ PP

  AA_permease 285 vsvlaplinaviltaalssansslysasRvlyslakdglaPkvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwll 382
                  +++l++++navi ++++s+an +++ ++R++++l+ +g+ P+ l+ v+ +g+P + +++++++++la+++++ n +  ivf++ll++s+l+++++w++
   KHJ30157.1 323 IKALPSIFNAVITLSVISVANTCTFGSTRTIQALCASGMGPAKLAEVDDKGRPRVILIIVLLFGCLAYVNEAKNGS--IVFTWLLSLSGLSNFFTWGS 418
                  *****************************************999999999**************************..******************** PP

  AA_permease 383 iilsylrfRkalkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilvgvklhvkn 472
                  i+++++rfRka+ ++grsi++l+f +++++ g++++l ++i+ l+++++ a+++   ++ +++a +f++ yl +++++++++g+k+++++
   KHJ30157.1 419 ICYAHIRFRKAWALNGRSIDDLPFASQYGVIGSWIGLGLNILCLIAQFYLALFP---IGRNSSARVFFENYLAFPVVIVFFIGYKIYYRQ 505
                  ******************************************************...999****************************97 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.3  43.4   2.9e-43   1.3e-39       8     415 ..      46     482 ..      42     497 .. 0.84

  Alignments for each domain:
  == domain 1  score: 136.3 bits;  conditional E-value: 2.9e-43
  AA_permease_2   8 alvigsvigsgifvkn..laasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkvaflsawfnwfayvpvlasilsvaas 101
                    +++ig  ig+g fv +  ++ sggp ++++ +i++++++l  + ++ El+++ p  g  y+y+++++ + ++f ++w + + +++vl++ l+ a+ 
     KHJ30157.1  46 MIAIGGSIGAGLFVGSgvALSSGGPGALVVDFIIIGLMLLLTVNALGELACMYPVAGSFYNYSARFIDPGWGFAMGWNYSMNWLIVLPFELTTAGI 141
                    689*************9766669998888777777777788999**************************************************** PP

  AA_permease_2 102 yllnalgpdlqgntwltylia.iaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl.....stetdt..ffpngwpg 189
                    +++++++p+++g++ + ++i   ++li +++ini+g+k+++ + ++lg +k+ + +i +iilg+i+ +gg  +++        ++    f ng +g
     KHJ30157.1 142 TIAFWTDPNGTGTPSINVGIWiTIFLISICVINIFGVKGYGEVEFVLGMVKV-IAIIGFIILGIIIDCGGVPTDNrgyigAKYWHEpgAFRNGFKG 236
                    **********9999966666526778899***********************.89999999***********99999887444444558899**** PP

  AA_permease_2 190 vllgllivlwsfdGfesaanvseevkk..kdvpkaifigllivlvlyllvniaflgvvpddeianlsn.....lgsvaalffeavggkvvaiivvi 278
                    + +++ +++++f+G e++   s e+ +  k +pka+  ++  ++++y+   + +  +vp d+ + ++        s++ l f+ +g k++ +i+++
     KHJ30157.1 237 FCSVFVTAAFAFGGTEMVGLASAEAANprKSIPKATKQVFWRIALFYIISLFILGLIVPSDNSSLSKAsdgatRFSPFVLSFKLAGIKALPSIFNA 332
                    ************************6666478******************9999999****999544441113333469****************** PP

  AA_permease_2 279 lialsllgaintavigssrvlealardgvlPrffakvnkfgspiraiiltaivslillllfllassaaynfllsvsslgliisyllliigalilrk 374
                    +i+ls++  +nt+++gs+r+++al+  g+ P  +a v+ +g+p +++i+++++ ++ ++  + + s  +++lls+s l++++ ++ +  + +  rk
     KHJ30157.1 333 VITLSVISVANTCTFGSTRTIQALCASGMGPAKLAEVDDKGRPRVILIIVLLFGCLAYVNEAKNGSIVFTWLLSLSGLSNFFTWGSICYAHIRFRK 428
                    ******************************************************9888666554488999***************99988888888 PP

  AA_permease_2 375 krphlkr.............pgkilvaiigalfllfllvalffppkgpatqssl 415
                         +r             +g ++   + +l+l+  ++++ fp  + +  + +
     KHJ30157.1 429 AWALNGRsiddlpfasqygvIGSWIGLGLNILCLIAQFYLALFPIGRNSSARVF 482
                    755557788888766654443335444444677776677777886655544433 PP

>> Pet100  Pet100
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.2e-05      0.14      11      69 ..     483     541 ..     481     544 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.2e-05
      Pet100  11 fglYvffPvgvfyyfnqpeyfeefvvktkreffppeekelreeleelkeerlakrekkl 69 
                 f  Y++fPv++ ++ +   y+++ ++ +  +  + ++   + +leel++e++++r+++ 
  KHJ30157.1 483 FENYLAFPVVIVFFIGYKIYYRQCTIGIDLKSINLDDGRRDINLEELRKELEDERAQRA 541
                 566************************999999999999999999*9999999998875 PP

>> DUF575  Protein of unknown function (DUF575)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   3.1    0.0007       3.1      14      33 ..     185     204 ..     183     207 .. 0.94
   2 ?   -1.6   0.0      0.75   3.4e+03      12      34 ..     315     337 ..     306     348 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0007
      DUF575  14 nfalGvikaiPivGhivvGv 33 
                 +f+lG++k i i+G i++G+
  KHJ30157.1 185 EFVLGMVKVIAIIGFIILGI 204
                 8******************8 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.75
      DUF575  12 itnfalGvikaiPivGhivvGve 34 
                 +  f l  ika+P + + v+ ++
  KHJ30157.1 315 VLSFKLAGIKALPSIFNAVITLS 337
                 557889999****9988887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       624  (0.0348039); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 4008.64
//
Query:       KHJ30158.1  [L=278]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       613  (0.0341904); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.36
# Mc/sec: 2331.47
//
Query:       KHJ30159.1  [L=833]
Description: putative start control protein cdc10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.9e-11   42.6   0.1    0.00048   20.5   0.0    4.6  4  Ank            Ankyrin repeat
    6.7e-09   36.1   0.1     0.0049   17.4   0.0    3.7  4  Ank_4          Ankyrin repeats (many copies)
    8.6e-09   35.9   0.0     0.0028   18.2   0.0    3.1  3  Ank_2          Ankyrin repeats (3 copies)
    4.7e-08   32.7   0.4      0.003   17.9   0.0    4.4  4  Ank_3          Ankyrin repeat
    1.8e-07   31.3   0.0      0.041   14.2   0.0    3.1  3  Ank_5          Ankyrin repeats (many copies)
     0.0001   22.1   3.9     0.0018   18.1   0.2    3.5  2  KilA-N         KilA-N domain
  ------ inclusion threshold ------
       0.13   12.1   7.7          1    9.2   0.1    4.2  4  YmgB           Biofilm development protein YmgB/AriR
          2    8.5   3.7         23    5.1   0.0    2.9  2  Bcr-Abl_Oligo  Bcr-Abl oncoprotein oligomerisation domain


Domain annotation for each model (and alignments):
>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   0.00012      0.26       3      28 ..     398     424 ..     397     428 .. 0.79
   2 ?    1.8   0.0      0.17   3.9e+02       2      13 ..     430     443 ..     429     460 .. 0.73
   3 ?    2.4   0.0      0.11   2.5e+02       2      11 ..     467     484 ..     466     511 .. 0.61
   4 !   20.5   0.0   2.1e-07   0.00048       2      31 ..     538     568 ..     537     569 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00012
                 BBHHHHHHHHTTHHHHHHHH.TTTSTT CS
         Ank   3 nTPLHlAatngkkriiklLL.hGAnln 28 
                 nT+L++Aat + ++ + +L+ +GA++ 
  KHJ30159.1 398 NTALMWAATLARVELLGNLIiRGASIF 424
                 8**********6666666788999875 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.17
                 SBBHHHHHH..HHT CS
         Ank   2 GnTPLHlAa..tng 13 
                 G T+L++ +  tn+
  KHJ30159.1 430 GETALMRSClvTNN 443
                 89****98877555 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.11
                 SBBHHH.HHH.......H CS
         Ank   2 GnTPLH.lAa.......t 11 
                 G+T+LH +A+       +
  KHJ30159.1 467 GRTVLHhIAIasavkgrS 484
                 99****766544544432 PP

  == domain 4  score: 20.5 bits;  conditional E-value: 2.1e-07
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnlnald 31 
                 G+T+L++A+++g+ +ii+ L+  GA++ + +
  KHJ30159.1 538 GDTALMIASRIGNRSIISQLIeVGADISIPN 568
                 9********************55***98876 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.1   2.6e-05     0.058       2      43 ..     398     438 ..     397     456 .. 0.86
   2 ?    0.1   0.0      0.57   1.3e+03      27      41 ..     460     473 ..     442     478 .. 0.77
   3 !   17.4   0.0   2.2e-06    0.0049       2      52 ..     468     555 ..     467     558 .. 0.77
   4 ?   -1.1   0.0       1.4   3.1e+03      20      43 ..     557     579 ..     557     580 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2.6e-05
       Ank_4   2 ltaLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAa 43 
                 +taL +aa   r+el+  L+ +ga+i ++ n+ Getal + +
  KHJ30159.1 398 NTALMWAATLARVELLGNLIIRGASIFRV-NSAGETALMRSC 438
                 699**************9999********.**********99 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.57
       Ank_4  27 inaqdnrsGetalhi 41 
                 i ++ ++ G+t lh+
  KHJ30159.1 460 IEMR-DSKGRTVLHH 473
                 6788.8889999996 PP

  == domain 3  score: 17.4 bits;  conditional E-value: 2.2e-06
       Ank_4   2 ltaLhyaai....sgrlelvrlLlekgad..................................inaqdnrsGetalhiAakrgnveilk 52 
                 +t+Lh+ ai    +gr ++ ++ le+  +                                  +n+q ++sG+tal iA ++gn +i+ 
  KHJ30159.1 468 RTVLHHIAIasavKGRSQASKYYLESLLEfvvrgsnttnnqkqitngqrasqsigigrfmseiVNMQ-DSSGDTALMIASRIGNRSIIS 555
                 788888888888866666655555555555555777888888888888888888888888899****.****************99875 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 1.4
       Ank_4  20 LlekgadinaqdnrsGetalhiAa 43 
                 L+e gadi    n+s +t+ ++++
  KHJ30159.1 557 LIEVGADISIP-NKSNLTPADFGV 579
                 566699****8.*******98875 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.054   1.2e+02      51      78 ..     395     422 ..     364     427 .. 0.76
   2 !   15.6   0.0   8.2e-06     0.018       1      73 [.     401     491 ..     401     498 .. 0.70
   3 !   18.2   0.0   1.2e-06    0.0028      25      81 ..     466     566 ..     447     568 .. 0.54

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.054
       Ank_2  51 ndgrtpLhyAarsghleivklLlekgad 78 
                  + +t+L++Aa   + e++  L+ +ga+
  KHJ30159.1 395 ASSNTALMWAATLARVELLGNLIIRGAS 422
                 5678999999987777776666655655 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 8.2e-06
       Ank_2   1 LhlAakngnlelvklLl.egadpn...kngktaLhyAak.ngnlei..vklLleh.......adndgrtpL.hyAars...ghleivklLl 73 
                 L++Aa     el+  L+  ga +    + g+taL+ ++   +nle+     Lle         d++grt+L h+A+ s   g++++ k+ l
  KHJ30159.1 401 LMWAATLARVELLGNLIiRGASIFrvnSAGETALMRSCLvTNNLEAgsFPKLLELlsptiemRDSKGRTVLhHIAIASavkGRSQASKYYL 491
                 78888876577777777777665544259******8888556778877455555223346777799*****99999877777777766655 PP

  == domain 3  score: 18.2 bits;  conditional E-value: 1.2e-06
       Ank_2  25 ngktaLhyAakn....gnleivklLle....h....................................adndgrtpLhyAarsghleivklLlekgadi 79 
                 +g+t+Lh+ a++    g  ++ k+ le    +                                    +d++g t+L++A+r g+  i+  L+e gadi
  KHJ30159.1 466 KGRTVLHHIAIAsavkGRSQASKYYLEslleFvvrgsnttnnqkqitngqrasqsigigrfmseivnmQDSSGDTALMIASRIGNRSIISQLIEVGADI 564
                 667777754443233344444333333222213333333333333333333333333333333333335577*********99**********99***9 PP

       Ank_2  80 nl 81 
                  +
  KHJ30159.1 565 SI 566
                 86 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0     0.006        13       3      28 ..     398     422 ..     396     423 .. 0.88
   2 ?    0.5   0.0       0.6   1.4e+03       2      14 ..     430     442 ..     429     456 .. 0.85
   3 ?    1.5   0.0       0.3   6.8e+02       2      12 ..     467     477 ..     466     497 .. 0.82
   4 !   17.9   0.0   1.3e-06     0.003       2      30 ..     538     565 ..     537     566 .. 0.94

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.006
       Ank_3   3 etpLhlAarsgnleivkfLlenkgad 28 
                 +t+L++Aa  +++e++  L+  +ga 
  KHJ30159.1 398 NTALMWAATLARVELLGNLII-RGAS 422
                 8*************9999988.7876 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.6
       Ank_3   2 GetpLhlAarsgn 14 
                 Get+L++ ++ +n
  KHJ30159.1 430 GETALMRSCLVTN 442
                 9*****9998765 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.3
       Ank_3   2 GetpLhlAars 12 
                 G+t Lh+ a +
  KHJ30159.1 467 GRTVLHHIAIA 477
                 9*****77655 PP

  == domain 4  score: 17.9 bits;  conditional E-value: 1.3e-06
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgadvn 30 
                 G t+L++A r gn +i+  L+e  gad+ 
  KHJ30159.1 538 GDTALMIASRIGNRSIISQLIE-VGADIS 565
                 89********************.8***97 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   3.8e-05     0.084      16      53 ..     397     434 ..     388     435 .. 0.93
   2 ?   -1.6   0.0       1.6   3.6e+03      12      22 ..     463     473 ..     458     479 .. 0.68
   3 !   14.2   0.0   1.8e-05     0.041       6      55 ..     528     577 ..     525     577 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.8e-05
       Ank_5  16 gntpLhvAakygaadvvrlLlargadlnltdsrGltal 53 
                 +nt+L++Aa   + +++ +L+ rga+++  +s G+tal
  KHJ30159.1 397 SNTALMWAATLARVELLGNLIIRGASIFRVNSAGETAL 434
                 67**********************************98 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.6
       Ank_5  12 ldgggntpLhv 22 
                 +d +g t+Lh+
  KHJ30159.1 463 RDSKGRTVLHH 473
                 45666677765 PP

  == domain 3  score: 14.2 bits;  conditional E-value: 1.8e-05
       Ank_5   6 padvnrldgggntpLhvAakygaadvvrlLlargadlnltdsrGltaldl 55 
                 ++ vn +d  g t+L++A++ g+ +++  L++ gad+ + ++++lt+ d+
  KHJ30159.1 528 SEIVNMQDSSGDTALMIASRIGNRSIISQLIEVGADISIPNKSNLTPADF 577
                 567999**************9999999999999**************996 PP

>> KilA-N  KilA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.2   7.8e-07    0.0018       9      91 ..      60     122 ..      53     131 .. 0.72
   2 ?    1.3   0.5      0.13   2.9e+02      18      50 ..     671     702 ..     659     743 .. 0.73

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 7.8e-07
      KilA-N   9 iirrvkdgyinatkllkaa.aedtkriddWlrnkstkelleeleedynisekkksektisenrkakpgrlqGtYvhpdlalava 91 
                 ++rr+kd + nat++lk a  e+ kr ++ l+++  +  +e+++                      +g++qGt+v  +  ++++
  KHJ30159.1  60 VMRRRKDSWLNATQILKVAgIEKGKR-TKVLEKEILTGEHEKVQG--------------------GYGKYQGTWVKFERGFEFC 122
                 588889*************5445555.556666555555555554....................4667999999999998887 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.13
      KilA-N  18 inatkllkaaaedtkriddWlrnkstkelleel 50 
                 + ++ l+ka +e++ ++++  + ++ ke+ eel
  KHJ30159.1 671 FKISNLCKALNEEKSKLSQLSQQQNQKEI-EEL 702
                 67899*****7777777887776666665.444 PP

>> YmgB  Biofilm development protein YmgB/AriR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.18   4.1e+02      18      31 ..     546     559 ..     542     560 .. 0.87
   2 ?    3.2   0.3     0.036        80      21      40 ..     605     624 ..     594     632 .. 0.81
   3 ?   -2.4   0.0       1.9   4.3e+03      23      40 ..     632     649 ..     622     651 .. 0.79
   4 ?    9.2   0.1   0.00045         1      26      50 ..     804     828 ..     801     830 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.18
                 ---SHHHHHHHHHH CS
        YmgB  18 gkvtnKaIIlkLie 31 
                 +++ n  II++Lie
  KHJ30159.1 546 SRIGNRSIISQLIE 559
                 5799*********7 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.036
                 SHHHHHHHHHHHHHT---HH CS
        YmgB  21 tnKaIIlkLiekLEsesdvv 40 
                 + K+II+++ + LE+++  +
  KHJ30159.1 605 NSKDIISSITNLLEETRAEF 624
                 78************998665 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 1.9
                 HHHHHHHHHHHHT---HH CS
        YmgB  23 KaIIlkLiekLEsesdvv 40 
                  aII  L +kL +es+++
  KHJ30159.1 632 QAIIDDLHSKLRNESSIL 649
                 389999999999998875 PP

  == domain 4  score: 9.2 bits;  conditional E-value: 0.00045
                 HHHHHHHHHT---HHHHHHHHHHHH CS
        YmgB  26 IlkLiekLEsesdvvqldvyRqaLE 50 
                 I++L+++LEse+d v+l  +R+ L 
  KHJ30159.1 804 ISSLVRSLESEHDDVELSRVRKFLS 828
                 99*******************9985 PP

>> Bcr-Abl_Oligo  Bcr-Abl oncoprotein oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   1.5     0.082   1.8e+02      25      57 ..     658     690 ..     653     698 .. 0.85
   2 ?    5.1   0.0      0.01        23      18      65 ..     752     799 ..     743     803 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.082
  Bcr-Abl_Oligo  25 svedieqeLerCkaslrrLekelneekfkviyL 57 
                    +++  ++e+e+   ++ +L k lneek k+  L
     KHJ30159.1 658 TLQSEQNEVETRNFKISNLCKALNEEKSKLSQL 690
                    66777899*******************998655 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.01
  Bcr-Abl_Oligo  18 vPkmeLdsvedieqeLerCkaslrrLekelneekfkviyLqtllaker 65 
                    v +  +++ + i+++Le+   +l+  + el++   k+i L t +  +r
     KHJ30159.1 752 VLRARVNAYNSINKDLEKNVLELKSKDSELTRKYRKIISLCTGIEEDR 799
                    55667788999**********************99****999887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (833 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1599  (0.0891851); expected 358.6 (0.02)
Passed bias filter:                      580  (0.0323498); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.76u 0.29s 00:00:01.05 Elapsed: 00:00:00.44
# Mc/sec: 5697.94
//
Query:       KHJ30160.1  [L=375]
Description: hypothetical protein EV44_g4475 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    0.00029   20.8   2.7    0.00071   19.6   1.2    2.4  3  Complex1_LYR  Complex 1 protein (LYR family)


Domain annotation for each model (and alignments):
>> Complex1_LYR  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   1.2   3.9e-08   0.00071       3      39 ..       8      44 ..       6      65 .. 0.86
   2 ?   -1.0   0.0      0.11   1.9e+03      31      41 ..     223     233 ..     223     245 .. 0.75
   3 ?   -3.0   0.0      0.45     8e+03      14      32 ..     296     314 ..     295     315 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 3.9e-08
  Complex1_LYR  3 vLsLYRalLRearkfpdyntreyfrrriRdeFrknkh 39
                   + LYR+lLR+++++pd   r+ +  ++ ++F+k + 
    KHJ30160.1  8 SINLYRSLLRATSYLPDQFARAIIHKHTVHRFKKAQQ 44
                  578******************************9765 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.11
  Complex1_LYR  31 RdeFrknkhvt 41 
                   RdeF++ k+++
    KHJ30160.1 223 RDEFERLKSLS 233
                   99****99865 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 0.45
  Complex1_LYR  14 arkfpdyntreyfrrriRd 32 
                   a+k p + +r  ++  iR 
    KHJ30160.1 296 AKKAPPKYMRPPIQKLIRS 314
                   6788888899999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       484  (0.0269954); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2907.37
//
Query:       KHJ30161.1  [L=215]
Description: hypothetical protein EV44_g4144 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.049   13.7   0.0       0.34   11.0   0.0    2.1  2  Lentiviral_Tat  Lentiviral Tat protein


Domain annotation for each model (and alignments):
>> Lentiviral_Tat  Lentiviral Tat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   1.9e-05      0.34      38      65 ..      23      50 ..      18      58 .. 0.88
   2 ?   -0.4   0.0     0.068   1.2e+03      11      36 ..     119     144 ..     113     148 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 1.9e-05
  Lentiviral_Tat 38 ilqrwlamlrngrlrrkvlremqkwlwr 65
                       rwla+l+++   ++v++e    lw 
      KHJ30161.1 23 SADRWLALLKQDFSAENVYKETHPQLWL 50
                    568*******************999996 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.068
  Lentiviral_Tat  11 gkeeleislfererdtwdyvsirvPg 36 
                     +++e  +s   r rd w+ +  r P 
      KHJ30161.1 119 EPHENLVSYIARVRDLWNLAGGRNPT 144
                     45566677888999999999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1736.61
//
Query:       KHJ30162.1  [L=1640]
Description: hypothetical protein EV44_g2056 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.18   10.9   0.9        0.3   10.2   0.9    1.3  1  Leg1      Leg1


Domain annotation for each model (and alignments):
>> Leg1  Leg1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.9   1.7e-05       0.3     205     285 ..     426     506 ..     409     523 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 1.7e-05
        Leg1 205 kklysseevsfaeswlssaeyvaaahfqsnleksvkflkqLPsrvLkeaDsaPniadltkeenhtllifswmkeinkllgg 285
                  +++ ++ vs+++   +s + v  ++f s  +     l+  P  + +e+D++ ni+++t e+n +l i s  ++++++l +
  KHJ30162.1 426 VEYLEAKKVSLEDKNTESKNPVENIEFMSMHNFQNPRLNSNPEVITNEDDRNKNINEITGENNDSLDINSEDSTVENILIE 506
                 5567888999999999999999999**9999999999999****************************9999999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1640 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2171  (0.121089); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                       101  (0.00563333); expected 17.9 (0.001)
Passed Fwd filter:                        35  (0.00195214); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 2.15u 0.37s 00:00:02.52 Elapsed: 00:00:00.62
# Mc/sec: 8022.18
//
Query:       KHJ30163.1  [L=189]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       820  (0.045736); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1458.54
//
Query:       KHJ30164.1  [L=1882]
Description: putative chitin synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.9e-247  822.1   1.0   2.9e-247  821.4   0.5    1.5  2  Chitin_synth_2   Chitin synthase
    4.4e-77  259.9   0.0      3e-76  257.1   0.0    2.0  1  Myosin_head      Myosin head (motor domain)
    4.5e-19   68.4   0.0    3.2e-15   56.0   0.0    3.5  2  Cyt-b5           Cytochrome b5-like Heme/Steroid binding doma
    3.4e-15   55.7   0.1    2.2e-14   53.1   0.2    2.3  2  DEK_C            DEK C terminal domain
    1.6e-13   51.0   4.2    1.6e-13   51.0   4.2    2.3  2  Glyco_trans_2_3  Glycosyl transferase family group 2
    5.3e-11   42.8   0.1    5.4e-10   39.5   0.1    2.2  2  Glyco_tranf_2_3  Glycosyltransferase like family 2
    0.00023   21.0   0.0       0.11   12.3   0.0    2.4  2  Glycos_transf_2  Glycosyl transferase family 2
  ------ inclusion threshold ------
      0.017   15.5   0.7       0.25   11.7   0.1    2.6  2  AAA_16           AAA ATPase domain
      0.026   14.4   0.0      0.067   13.1   0.0    1.6  1  RsgA_GTPase      RsgA GTPase
       0.03   13.8   0.3       0.26   10.7   0.3    2.2  1  Glyco_transf_21  Glycosyl transferase family 21
      0.094   13.0   0.3        0.3   11.3   0.0    2.0  2  AAA_22           AAA domain


Domain annotation for each model (and alignments):
>> Chitin_synth_2  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  821.4   0.5  1.8e-250  2.9e-247       2     527 .]    1214    1722 ..    1213    1722 .. 0.98
   2 ?   -2.4   0.0      0.85   1.4e+03     319     375 ..    1819    1875 ..    1815    1879 .. 0.74

  Alignments for each domain:
  == domain 1  score: 821.4 bits;  conditional E-value: 1.8e-250
  Chitin_synth_2    2 stiiaksvaalqlidkrslefqlkfticlvtaysegeeglrttldslastdyddkrklllvvcdGlikGsGndkstPeivldllkdavspked 94  
                      s+i +k+ aalq++ k+ +e+ +kf+ic+v+ay+e+e++lr+++ds+a+++yddkrkll+v+cdG+i+G+Gnd++tP+ivld+l+  vs++ d
      KHJ30164.1 1214 SVIGFKFFAALQFGGKNIPENLDKFVICQVPAYTEDEDSLRRAIDSAARMRYDDKRKLLVVICDGMIIGQGNDRPTPRIVLDILG--VSDSID 1304
                      6788999******************************************************************************..****** PP

  Chitin_synth_2   95 veplsyvavaeGskrhnkakvyaGfyeyeddstvpeekqqrvPlivvvkvGtpseasekkPGnrGkrdsqiilmsflekvtfdermteleyel 187 
                      +epls+++++eG+k+hn++kvy+G+ye+++  ++       vP++v+vkvG+pse+s  +PGnrGkrdsq++lm+fl++v++++ m++le+e+
      KHJ30164.1 1305 PEPLSFESLGEGMKQHNMGKVYSGLYEVQG--HI-------VPFLVIVKVGKPSEVS--RPGNRGKRDSQMVLMRFLNRVHYNAPMSPLELEM 1386
                      *****************************8..77.......***************9..********************************** PP

  Chitin_synth_2  188 fkkikkviGvspdfyeivlmvdadtkvapdsltrlvaalvkdpeilglcGetkiankkeswvtaiqvfeyyishhlskafesvfGsvtclPGc 280 
                      +++i+++iGv+p+fye++l++dadt v +ds++r+v+a+++d++++g+cGet ++n+k+s++t+iqv+eyyish+lskafes+fGsvtclPGc
      KHJ30164.1 1387 YHQIRNIIGVNPTFYEYMLQIDADTVVGADSASRMVSAFLDDTRLIGVCGETALSNAKSSFITMIQVYEYYISHNLSKAFESLFGSVTCLPGC 1479
                      ********************************************************************************************* PP

  Chitin_synth_2  281 fslyrikaakgadgkwvPilvspeiveeysenvvdtlhkknllllGedrylttlllktfpkrktvfvpqakcktvaPdtfkvllsqrrrwins 373 
                      f++yri+a ++  g  +P++vs+e+ve+y++++vdtlh+knll+lGedrylttll+k++pk+kt+++  a+++t+aPd+++v+lsqrrrwins
      KHJ30164.1 1480 FTMYRIRAVDS--G--KPLFVSREVVEQYANIRVDTLHMKNLLHLGEDRYLTTLLMKHHPKYKTKYIRTAHAWTIAPDSWQVFLSQRRRWINS 1568
                      *********99..6..9**************************************************************************** PP

  Chitin_synth_2  374 tvhnllelvlvrdlcGtfcfsmrfvvfieligtvvlPvaiaftlylivasilk.sklvpviplvllaivlGlpailivltarkleyvawllvy 465 
                      tvhnl+el+ +++lcG++cfsmrf+vf++l++t+v+Pv++a+++yli  ++   ++l+p+ +++ll++++Gl+a++++l+ rk+e+++w+++y
      KHJ30164.1 1569 TVHNLIELIPLSQLCGFCCFSMRFIVFLDLLSTLVQPVTLAYIVYLIFLIVWDnKSLIPTTAFILLGAIYGLQAVIFILH-RKWEMIGWMILY 1660
                      ***********************************************99888747899*********************9.************ PP

  Chitin_synth_2  466 llalPifnfvlPlyafwhlddfswGetrvveGekkkkaageaegefdsskivlkrfeefere 527 
                      +la+P+f+f lPly+fwh+ddfswG+trvv+Gek+kk + ++eg+fd+ +i+ k++ee++ e
      KHJ30164.1 1661 ILAIPVFSFGLPLYSFWHMDDFSWGNTRVVTGEKGKKIVITDEGKFDPNSIPHKKWEEYQTE 1722
                      ***********************************************************975 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.85
  Chitin_synth_2  319 kknllllGedrylttlllktfpkrktvfvpqakcktvaPdtfkvllsqrrrwinstv 375 
                      + nl  l +d  + +++    +    + v +   k     +f v l  rr +ins +
      KHJ30164.1 1819 MSNLTGLPNDDAILAVIRDILKTADLMTVTKKSIKLELERRFGVALDARRAYINSGM 1875
                      56666666666666666666666667778888888888999*************976 PP

>> Myosin_head  Myosin head (motor domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.1   0.0   1.9e-79     3e-76      71     676 ..      78     772 ..      64     773 .. 0.89

  Alignments for each domain:
  == domain 1  score: 257.1 bits;  conditional E-value: 1.9e-79
                  HHHHHHHHHHHHTSEEEEEEESSTTSSHHHHHHHHHHHHHHHSSSSSCTCTTHHHHHHHHHHHHHHHHHEEEESSETTEESSEEEEEEEEETTSSE.. CS
  Myosin_head  71 iadeayrslledkenqsilisGEsGAGKteatKkvlqylasvaeskekveeeeleekilqsnPilEafGnAktvrndnssRFGKfieiefdakgki.. 166
                  +ad+ay +l +++enq+i+  GEsGAGKt    ++l+ +   ++ +     + l++k+  +  i++++   kt     +s+ G f+e+++d+++++  
   KHJ30164.1  78 LADRAYARLGARSENQAIVFLGESGAGKTTVRSHLLSAF--LNKYS-----TPLSTKLSLAAYIFDTLTTTKTATTPTASKAGLFFELQYDTASTVnp 168
                  89**************************99887777533..33333.....478899999999****************************9987523 PP

                  ..EEEEEEEECE-GGGGT---TT--SBHHHHHHHHCSTHHHHHHTT--TCCGSTTTTTTSSSSB.....................TTS-HHHHHHHHH CS
  Myosin_head 167 ..agakietYLLEksRvvkqakeERnyHiFYqllagaseeekkelkledvkdyaylsqsgeltv.....................dgiddseefketk 241
                    +g+ki    LE+sRv     +ERn+H+ Y+llag+s  ek++l l+++ + +   +s ++ v                      gi+d+e f+  k
   KHJ30164.1 169 ilIGGKILDHRLERSRVASVPIGERNFHVLYYLLAGTSVAEKTHLGLDSPGTLSNAVHSPSQAVhgditgnqkrwrylghptqlkVGINDAEGFQLFK 266
                  337**********************************************9999988888888889999****************99************ PP

                  HHHHHHT--HHHHHHHHHHHHHHHHHCTSSEEEECTTSSE................EESSHHHHHHHHHHHTS-HHHHHHHHHSEEEEETTEEEEEE- CS
  Myosin_head 242 kaldilglseeeqkeifrivaailhlGniefkkeakdeqa................vledeeklekaaellgvdaeelekalvkrriktgkevvskal 323
                   al  l +  +e++ei +++a+ilhlG++ef+ +a +  a                 +++++ l+++a+ lgv+a++l+++l  ++   ++e v++ l
   KHJ30164.1 267 TALRKLEFPRSEIAEICQVLASILHLGQLEFEITAGNM-AlgdeggysheasqsttAVKNKDVLSIVAAFLGVSAQDLQTTLGYKTKILQRERVTVML 363
                  *******************************9876432.2234445666666666566777779********************************** PP

                  BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-S-SEEEEEEEEE-B---..SSB-HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTSSGCG CS
  Myosin_head 324 nveqaevardalakaiyerlFdwlverinkslekkkeekksfiGvLDiaGFEif..eknsFEqlcinyvnEkLqqlFnelvlklEqeeYvrEgiewkf 419
                  + + a+   + la+++y+ l  +++e in+ +++++++ ++ i ++D  GF     +    +ql  n + E L ++  ++ + +  e   +E++++  
   KHJ30164.1 364 DPKGARSNANELARTLYSLLVAYVIESINQRICATEDTVANTIAIIDFPGFAQQssTDSVLDQLLSNAATESLYNFTLQTFFEAKAEMLENEEVSVAA 461
                  ***************************************************8651144568************************************* PP

                  S-GGGCCHHHHHHHHSSSTSHHHHHHHHHTSTTS-HHHHHHHHHHHH.TTSTTEEETTS...........TTTTTEEEEEETTCEEEEE-TTHHHHHH CS
  Myosin_head 420 idfgldnqaiidLiekkplGilslLdeecllpkatdetfleklvkaf.skhakfeksrl...........kkgeakFiikHyAgkveYevegfleKnk 505
                    + +dn + +  + k ++G+ls+Ld++++  k td+++le l k+f  k++  + s+            ++  a+F +kH+Ag+v+Y ++g +e n+
   KHJ30164.1 462 TSY-FDNSDAVKGLLKPSNGLLSILDDQAKRNK-TDMQLLECLRKRFeGKNPAISVSSAtaklpgsnfatHNLAASFSVKHFAGEVDYLIAGLIEENE 557
                  ***.99999999888889***********9865.89***********7677755544334578999888777889*********************** PP

                  ----HHHHHHHHTSSSHHHHHHCCSHCH...............................................B--.........CSSSECCCCCS CS
  Myosin_head 506 Dtlnedlvellksskkkllaelfkeeek...............................................eakaeakksekkkkkkkkkkkfk 556
                  ++++ dl++l+ s+k++++++lf +e                                                 ++  e  +s +  k ++ ++  +
   KHJ30164.1 558 ESVSGDLMNLIASTKNDFVSQLFGQEALrtvvhpqekktimqaqvsskplrkpsvmrrkgdgvsgisgrdikdpfDSIDELPESRDGVKGRRGRNIDH 655
                  ***********************9988799****************************************9998766666667777777777777788 PP

                  BHHHHHHHHHHHHHHHHC..TSEEEEEEEE-SSSS--TT---HHHHHHHHHHTTHHH.HHHHHHHSSSEEEEHHHHHHHHGGGSTTSS-SS.SSSHHH CS
  Myosin_head 557 tvgskfkeslaeLmktle..stnphfvRCikpnekkkakkldeslvleqlrclGvle.girirraGfpnRitfeefvqrYkllakkelkkllkedakk 651
                   ++ +f + l +++k+l+  +tnp fv C+kpn+++ a+++d++ v +q+++ G+ e + r+r+a f+    f+ef+     la+ e    l +++++
   KHJ30164.1 656 GAAGQFLSGLDDVIKSLTapNTNPYFVFCLKPNDRRIANQFDSKCVRTQIQTFGIAEiSQRLRNADFSIFLPFAEFLG----LAEAES--ILVGSERE 747
                  9999*************84469999*******************************945699******9999999985....444443..45689999 PP

                  HHHHHHHHTTS-GCGEEECSSEEEE CS
  Myosin_head 652 aveailkeleldkeeykiGktKiFf 676
                   +e++++e +  ++e +iG+t +F+
   KHJ30164.1 748 KAETVVDERRWPANEARIGSTGVFL 772
                  ***********************97 PP

>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.0     2e-18   3.2e-15       2      73 ..     961    1090 ..     960    1091 .. 0.84
   2 !    7.9   0.0    0.0021       3.4       4      54 ..    1096    1142 ..    1093    1191 .. 0.62

  Alignments for each domain:
  == domain 1  score: 56.0 bits;  conditional E-value: 2e-18
                  HHHHTTTECTT..EEEEEETTEEEECTTTC.CCST..TCSHHHHTTTTSBBHHHHHHTT...GGCHHH............................. CS
      Cyt-b5    2 leelskhngkn..dlwvairgkVYDvskfl.skhp..GgesailkyaGkDateafksvv...hsekda............................. 61  
                  ++els+++gk+   ++vairg+V+D+++f+ s+ p   ++++il+yaG Dat +f+++v   +++ ++                             
  KHJ30164.1  961 ASELSSFDGKKgrHAYVAIRGQVFDLTEFApSHFPniIPQKSILAYAGLDATSLFPVQVsalCQGVNGtidpsiqldytstntsgsasvisstdsny 1057
                  79******88889*****************88889*****************************999999999999998888888888888888888 PP

                  ...................HHH..HHG.GEEEEE CS
      Cyt-b5   62 ...................ekl..lkk.ylvGkl 73  
                                     + +  l++ y++G++
  KHJ30164.1 1058 ryhdfraftndsrpdwffeQ-MmlLRAnYHKGNI 1090
                  87666666666666666641.2557777888876 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0021
                  HHTTTECTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHT CS
      Cyt-b5    4 elskhngkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksv 54  
                   ++k ++k+ +  ++++++YD++k+l   +Gg  a +   G+D+ +++++ 
  KHJ30164.1 1096 YVRKLAEKQVSMAILNDRIYDLTKYL---QGG-RAVKVKPGEDVPTDVNTN 1142
                  577788888888899**********9...566.446666677666666665 PP

>> DEK_C  DEK C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.5   2.4e+03      37      53 ..    1557    1573 ..    1556    1574 .. 0.84
   2 !   53.1   0.2   1.3e-17   2.2e-14       1      53 [.    1826    1878 ..    1826    1879 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.5
       DEK_C   37 vdLsekKafIkalIdei 53  
                  v Ls+++ +I+++++++
  KHJ30164.1 1557 VFLSQRRRWINSTVHNL 1573
                  569**********9876 PP

  == domain 2  score: 53.1 bits;  conditional E-value: 1.3e-17
       DEK_C    1 psdeeirkaireiLreaDLdtvTkkkvReqLeeklgvdLsekKafIkalIdei 53  
                  p d+ i + ir+iL++aDL+tvTkk++  +Le ++gv L  ++a+I++ + +i
  KHJ30164.1 1826 PNDDAILAVIRDILKTADLMTVTKKSIKLELERRFGVALDARRAYINSGMLRI 1878
                  789********************************************977665 PP

>> Glyco_trans_2_3  Glycosyl transferase family group 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.2      0.51   8.3e+02     153     181 ..     924     952 ..     883    1025 .. 0.63
   2 !   51.0   4.2   9.9e-17   1.6e-13       3     190 ..    1405    1617 ..    1403    1669 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.51
  Glyco_trans_2_3 153 vrllgylgsllwsalplhlallllfslla 181
                      +r    +  l+w + +++ +++++f++l+
       KHJ30164.1 924 WREKFAINMLIWLSCLFAAFVVVVFPMLI 952
                      44445555555555555555555555544 PP

  == domain 2  score: 51.0 bits;  conditional E-value: 9.9e-17
  Glyco_trans_2_3    3 lllDaDtvlppdclreiaaelaspevaivqgpvlvm..nvanwleelaalffaedhgkdilvrealgrvvpsvGsgaflrrsalq....... 85  
                       l +DaDtv+ +d+  + ++ + ++ + i+ +  ++   +++++++ ++++++ ++h+ +  + + +g+v+ ++G  ++ r++a++       
       KHJ30164.1 1405 LQIDADTVVGADSASRMVSAFLDDTRLIGVCGETALsnAKSSFITMIQVYEYYISHNLSKAFESLFGSVTCLPGCFTMYRIRAVDsgkplfv 1496
                       679**************997776555666666665333789********************************************9998888 PP

  Glyco_trans_2_3   86 ...........evggwdgdes......svsEDfdmglrlqrkG..yrvrfvpeslvkekspltlraalrQrkRwayGceleklillvrll.. 156 
                                  +v +            +++ED ++   l+++   y++ ++  +  ++  p++++ +l Qr+Rw+       ++ l+ l+  
       KHJ30164.1 1497 srevveqyaniRVDT-----LhmknllHLGEDRYLTTLLMKHHpkYKTKYIRTAHAWTIAPDSWQVFLSQRRRWINST----VHNLIELIpl 1579
                       885555444442223.....1333344*************99999********************************4....3333333322 PP

  Glyco_trans_2_3  157 gylgsllwsalplhlallllfslla...lalvl.llll 190 
                        +l  ++++++ + ++l ll+ l+    la+++ l++l
       KHJ30164.1 1580 SQLCGFCCFSMRFIVFLDLLSTLVQpvtLAYIVyLIFL 1617
                       55666666666555544444444432222222212222 PP

>> Glyco_tranf_2_3  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.31     5e+02       4      43 ..    1239    1287 ..    1237    1298 .. 0.69
   2 !   39.5   0.1   3.3e-13   5.4e-10      79     228 ..    1386    1566 ..    1373    1568 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.31
  Glyco_tranf_2_3    4 lavlVptfneed.vlgevlesllaqey..prvevvvvv......desda 43  
                       +++ Vp++ e++  l++ ++s+++  y   r  +vv++      +++d+
       KHJ30164.1 1239 VICQVPAYTEDEdSLRRAIDSAARMRYddKRKLLVVICdgmiigQGNDR 1287
                       6789*****99878999******99996433333444325555555555 PP

  == domain 2  score: 39.5 bits;  conditional E-value: 3.3e-13
  Glyco_tranf_2_3   79 lnealravk......sdlvllvDdDtvv.ePdtlkrllqff.ltpkvgavgtpvfllnrstlvsalgalefaerhlrflaarralg.vltln 161 
                       +++++r++       +++ l +D+Dtvv  + + +++ +f+  t+ +g+ g   +++  s+++++ +  e+++ h    a+   +g v++l 
       KHJ30164.1 1386 MYHQIRNIIgvnptfYEYMLQIDADTVVgADSASRMVSAFLdDTRLIGVCGETALSNAKSSFITMIQVYEYYISHNLSKAFESLFGsVTCLP 1477
                       788888844444555899**********66666777777774444455555555667799****************999**98888679999 PP

  Glyco_tranf_2_3  162 Gsgslirrevlkele...................gldp.lflltdDyelglrlrr..agfrtayvpgaavrevfpsslkayikqrnRwv 228 
                       G ++++r + ++  +                   ++++ l +l++D  l+  l++   +++t+y   a  ++  p+s++ +  qr+Rw+
       KHJ30164.1 1478 GCFTMYRIRAVDSGKplfvsrevveqyanirvdtLHMKnLLHLGEDRYLTTLLMKhhPKYKTKYIRTAHAWTIAPDSWQVFLSQRRRWI 1566
                       9999999999999999999999999999****98788899*******9999999955589****************************7 PP

>> Glycos_transf_2  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0055       8.9       4      32 ..    1243    1272 ..    1241    1278 .. 0.75
   2 !   12.3   0.0   6.8e-05      0.11      76     167 ..    1397    1489 ..    1390    1491 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0055
                       EEESS-.TTTHHHHHHHHHHHGGCCEEEEE CS
  Glycos_transf_2    4 iptyNe.ektlletlesllaqdpypdfeii 32  
                       +p+y e e+ l+++++s++++ ++++ +++
       KHJ30164.1 1243 VPAYTEdEDSLRRAIDSAARMRYDDKRKLL 1272
                       8********************333333333 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 6.8e-05
                       HH--SSEEEEEESSEEE-TTHHHHHHHHHHH..TTCEEEEEEEEEECCCCCCCHC-SSEEEECCHCCCCHCCCCCCSTTCSTCCCEEEEHHH CS
  Glycos_transf_2   76 raatgdyilflDaDdepdpdwleklvealekd.gadvvlgqrprifgetdeiernkrvgenerlyfkerkrslkgnlsfeigsaallrreal 166 
                         +  +y+l +DaD+++  d  +++v a+ +d +  +v+g +  ++ ++ +i+  + +++    +  +   sl+g++++  g+++++r +a+
       KHJ30164.1 1397 NPTFYEYMLQIDADTVVGADSASRMVSAFLDDtRLIGVCGETALSNAKSSFITMIQVYEYYISHNLSKAFESLFGSVTCLPGCFTMYRIRAV 1488
                       5567799*************99999987766538899****************998876677777777777889999***********9887 PP

                       H CS
  Glycos_transf_2  167 e 167 
                       +
       KHJ30164.1 1489 D 1489
                       5 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   0.00015      0.25      13      51 ..      80     119 ..      75     153 .. 0.79
   2 ?    1.0   0.1      0.31     5e+02      40     161 ..     383     505 ..     381     515 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00015
      AAA_16  13 lsalervrsgrp.elvllsGesGvGKsslvrellralekd 51 
                  +a+ r+ + ++ +++++ GesG GK+++  +ll a+  +
  KHJ30164.1  80 DRAYARLGARSEnQAIVFLGESGAGKTTVRSHLLSAFLNK 119
                 56777777777779****************9999877766 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.31
      AAA_16  40 lvrellralekdggiflrgkcdqlesa.ipysalaqalareellrqlldeaesaeleawrekleealaavpelagaea.....srllellkrll.alls 131
                 lv  + ++++++  i+++++++ ++ a i +  +aq+ +++++l qll++a++ e  +  + l++ ++a +e+   e+     ++ ++   +++  ll+
  KHJ30164.1 383 LVAYVIESINQR--ICATEDTVANTIAiIDFPGFAQQSSTDSVLDQLLSNAAT-ESLYNFT-LQTFFEAKAEMLENEEvsvaaTSYFDNS-DAVkGLLK 476
                 666666666766..555555555543334555699999999999999999444.3333333.3444442222222222344436666663.44426666 PP

      AAA_16 132 rderplvlvlDdlqwadeaslqllaaLlrl 161
                 + +  l+ +lDd  +   +++qll++L ++
  KHJ30164.1 477 P-SNGLLSILDDQAKRNKTDMQLLECLRKR 505
                 6.6669999999999999999999999876 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   4.1e-05     0.067      86     122 ..      79     115 ..      26     148 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.1e-05
                  THTTHHHHHHHCTTSEEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase  86 tkegleelkellkdktsvlvGqSGvGKStLinallpe 122
                    +++++l ++ +++ +v++G+SG+GK+t+  +ll+ 
   KHJ30164.1  79 ADRAYARLGARSENQAIVFLGESGAGKTTVRSHLLSA 115
                  4566788999999****************99999875 PP

>> Glyco_transf_21  Glycosyl transferase family 21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.3   0.00016      0.26      27     115 ..    1397    1490 ..    1388    1567 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00016
  Glyco_transf_21   27 eaakydllvisDsdvrvkpdyLeellaaled.pkvglVtslpvgsdakglaaaleaafl.ntlagvlqa...klsglgfavGksmalrreaL 113 
                       +   y+++++ D+d++v +d   +++ a+ d ++   V++  + s+ak+   ++ +++  ++ +++ +a    ++ + +  G + ++r +a+
       KHJ30164.1 1397 NPTFYEYMLQIDADTVVGADSASRMVSAFLDdTRLIGVCGETALSNAKSSFITMIQVYEyYISHNLSKAfesLFGSVTCLPGCFTMYRIRAV 1488
                       556699***********************994555569999999999987777777776456666666643233566666666666665555 PP

  Glyco_transf_21  114 ea 115 
                       ++
       KHJ30164.1 1489 DS 1490
                       54 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00019       0.3       4      35 ..      91     122 ..      88     165 .. 0.77
   2 ?   -3.3   0.0       6.2     1e+04      44     103 ..     408     471 ..     381     498 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00019
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeaka 35 
                 + + +v  GesG+GKTt+   ll+ + + ++ 
  KHJ30164.1  91 ENQAIVFLGESGAGKTTVRSHLLSAFLNKYST 122
                 678999****************9998776554 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 6.2
      AAA_22  44 fvtlpsst...sskdllrellralglelkaerlsseellealeqalrarav..ielliiDEaqhl 103
                  ++ p+     s +++l +ll++   e  + + +++ ++ea ++ l++  v   +    D+ + +
  KHJ30164.1 408 IIDFPGFAqqsSTDSVLDQLLSNAATESLY-NFTLQTFFEAKAEMLENEEVsvAATSYFDNSDAV 471
                 555555555546666677777777776666.7888888888888777777655555555666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1882 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 1.11u 0.31s 00:00:01.42 Elapsed: 00:00:00.47
# Mc/sec: 12086.92
//
Query:       KHJ30165.1  [L=1710]
Description: putative chitin synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.1e-228  760.2   0.0   1.5e-228  759.7   0.0    1.2  1  Chitin_synth_2   Chitin synthase
    6.4e-15   55.1   0.1    1.8e-09   37.6   0.0    2.8  2  Cyt-b5           Cytochrome b5-like Heme/Steroid binding doma
    4.6e-13   49.5   2.4    4.6e-13   49.5   2.4    1.9  2  Glyco_trans_2_3  Glycosyl transferase family group 2
    1.2e-10   41.7   0.0    4.4e-10   39.8   0.0    1.9  2  Glyco_tranf_2_3  Glycosyltransferase like family 2
    4.4e-08   31.8   0.0    1.3e-07   30.2   0.0    1.6  1  Myosin_head      Myosin head (motor domain)
    0.00061   19.6   0.0       0.11   12.3   0.0    2.4  2  Glycos_transf_2  Glycosyl transferase family 2
     0.0032   17.0   0.0      0.012   15.1   0.0    1.9  2  Glyco_transf_21  Glycosyl transferase family 21


Domain annotation for each model (and alignments):
>> Chitin_synth_2  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  759.7   0.0  5.9e-232  1.5e-228       2     525 ..    1065    1573 ..    1064    1575 .. 0.98

  Alignments for each domain:
  == domain 1  score: 759.7 bits;  conditional E-value: 5.9e-232
  Chitin_synth_2    2 stiiaksvaalqlidkrslefqlkfticlvtaysegeeglrttldslastdyddkrklllvvcdGlikGsGndkstPeivldllkdavspked 94  
                      ++i++k++aalq+++kr++  q+kf+ic+v+ay+ege++lr++ldsl++++yd+krkl+ v+cdG+i+GsGnd++tP+ivld+l+  v+pk d
      KHJ30165.1 1065 AVILVKFLAALQFGSKRRPIPQDKFVICQVPAYTEGEDSLRKALDSLTALQYDNKRKLICVICDGMIVGSGNDRPTPKIVLDILG--VDPKID 1155
                      57899********************************************************************************..****** PP

  Chitin_synth_2   95 veplsyvavaeGskrhnkakvyaGfyeyeddstvpeekqqrvPlivvvkvGtpseasekkPGnrGkrdsqiilmsflekvtfdermteleyel 187 
                      + +l +++v+e s + n++kvy+G+yeye+  +v       vP+iv+vkvG++se+s++kPGnrGkrdsqi+l+sfl++v+    m +le+e+
      KHJ30165.1 1156 PPALPFKSVGESSDQLNYGKVYSGLYEYEG--NV-------VPYIVIVKVGKESEQSKSKPGNRGKRDSQILLLSFLNRVHNRTPMNPLELEM 1239
                      *****************************8..66.......9*************************************************** PP

  Chitin_synth_2  188 fkkikkviGvspdfyeivlmvdadtkvapdsltrlvaalvkdpeilglcGetkiankkeswvtaiqvfeyyishhlskafesvfGsvtclPGc 280 
                      f++i ++iGv+p+ ye++lm+dadt v  dsl+rlvaa++++++i g+cGet+++n++ sw+t+iqv+ey+ishhl+kafes+fGsvtclPGc
      KHJ30165.1 1240 FHQINNIIGVDPELYEYLLMIDADTSVREDSLNRLVAACANNAKIAGICGETSLENEERSWWTMIQVYEYFISHHLAKAFESLFGSVTCLPGC 1332
                      ********************************************************************************************* PP

  Chitin_synth_2  281 fslyrikaakgadgkwvPilvspeiveeysenvvdtlhkknllllGedrylttlllktfpkrktvfvpqakcktvaPdtfkvllsqrrrwins 373 
                      fs+yr+++a++  g  +P+++s+ ++ eys+ vvdtlhkknll lGedr+lttl+ k+fp +  +f+p+a + t aP+t++vllsqrrrwins
      KHJ30165.1 1333 FSMYRLRTADK--G--KPLIISDAVISEYSDCVVDTLHKKNLLSLGEDRFLTTLMTKHFPYMSYKFIPDAYASTAAPETWSVLLSQRRRWINS 1421
                      ********999..6..9**************************************************************************** PP

  Chitin_synth_2  374 tvhnllelvlvrdlcGtfcfsmrfvvfieligtvvlPvaiaftlylivasilksklvpviplvllaivlGlpailivltarkleyvawllvyl 466 
                      t+hnl+elv+++++cG++cfsmrfvvfi+l gt++lP++ a++ yli ++ +++   p+i+++++a+v+Gl+a++++l+ r++++++w+++yl
      KHJ30165.1 1422 TIHNLAELVRLEEMCGFCCFSMRFVVFIDLFGTLILPATCAYLGYLIYNVSMHKGQFPLISIIMIAAVYGLQALVFILK-RQWQHIGWMIIYL 1513
                      *******************************************************************************.************* PP

  Chitin_synth_2  467 lalPifnfvlPlyafwhlddfswGetrvveGekkkkaage.aegefdsskivlkrfeefe 525 
                      la+Pi++fvlP+y+fw+ d+fswG+tr+v Gek+kk+++  +++ fd+ +i+l+r++++ 
      KHJ30165.1 1514 LAFPIYSFVLPIYSFWNQDNFSWGNTRIVIGEKGKKQVVAvDDEGFDPRSIPLQRWDDYA 1573
                      *********************************977665516778*************97 PP

>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.0     7e-13   1.8e-09       2      56 ..     821     884 ..     820     944 .. 0.79
   2 !   14.5   0.0   1.2e-05      0.03       7      29 ..     953     975 ..     946    1028 .. 0.76

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 7e-13
                 HHHHTTTECTTEEEEEETTEEEECTTTC.CCST.....TCSHHHHTTTTSBBHHHHHHTT...G CS
      Cyt-b5   2 leelskhngkndlwvairgkVYDvskfl.skhp.....GgesailkyaGkDateafksvv...h 56 
                 ++els+h+g nd wv+++gkVYD+skf+ ++h      + ++ ++ + G ++ e+f  ++   +
  KHJ30165.1 821 ERELSAHQGANDFWVSVHGKVYDISKFWkQQHSdiaiqTTAENMQPFGGLNLDEYFVPPLtiaC 884
                 689*************************889989999999999******999999977655554 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 1.2e-05
                 TTECTTEEEEEETTEEEECTTTC CS
      Cyt-b5   7 khngkndlwvairgkVYDvskfl 29 
                   +++n +w++++gk+YD++++ 
  KHJ30165.1 953 DGQDENHYWFILNGKIYDLTDYF 975
                 445788**************997 PP

>> Glyco_trans_2_3  Glycosyl transferase family group 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6   1.5       6.9   1.8e+04     162     182 ..     750     790 ..     738     805 .. 0.52
   2 !   49.5   2.4   1.8e-16   4.6e-13       1     182 [.    1256    1486 ..    1256    1528 .. 0.68

  Alignments for each domain:
  == domain 1  score: -4.6 bits;  conditional E-value: 6.9
  Glyco_trans_2_3 162 llwsalplhlallllfslla....................l 182
                       +w+a+++++++++ + +l+                     
       KHJ30165.1 750 RVWVAIVWAFTFWIPSIFLRifgrmkrpdvqmawrekfvlC 790
                      45666666665554444444555666666666666666532 PP

  == domain 2  score: 49.5 bits;  conditional E-value: 1.8e-16
  Glyco_trans_2_3    1 iilllDaDtvlppdclreiaaela.spevaivqgpvlvm.nvanwleelaalffaedhgkdilvrealgrvvpsvGsgaflrrsalq..... 85  
                       + l++DaDt + +d+l++++a +a + ++a ++g +  + + ++w++ ++++++ ++h  +  + + +g+v+ ++G  ++ r++ ++     
       KHJ30165.1 1256 YLLMIDADTSVREDSLNRLVAACAnNAKIAGICGETSLEnEERSWWTMIQVYEYFISHHLAKAFESLFGSVTCLPGCFSMYRLRTADkgkpl 1347
                       5799********************447********99974789***********99*******************************77777 PP

  Glyco_trans_2_3   86 ....evg...........gwdgdessvsEDfdmglrlqrkG...yrvrfvpeslvkekspltlraalrQrkRwayGc.......eleklil. 151 
                           + +             + +  s++ED ++   l++k    +   f+p++   +  p t+   l Qr+Rw+                + 
       KHJ30165.1 1348 iisdA-ViseysdcvvdtLHKKNLLSLGEDRFL-TTLMTKHfpyMSYKFIPDAYASTAAPETWSVLLSQRRRWINSTihnlaelV-----Rl 1432
                       77651.1344445544433334455*****887.5666665588999*****************************766433220.....13 PP

  Glyco_trans_2_3  152 ...............lvrllgylgsllwsalplhlallllfslla............l 182 
                                       ++l+g l ++++    ++++++l++++++            +
       KHJ30165.1 1433 eemcgfccfsmrfvvFIDLFGTLILPAT----CAYLGYLIYNVSMhkgqfplisiimI 1486
                       4444444444444442222222222222....33333344333334444333222111 PP

>> Glyco_tranf_2_3  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.94   2.4e+03       4      39 ..    1090    1128 ..    1088    1141 .. 0.81
   2 !   39.8   0.0   1.7e-13   4.4e-10      79     228 ..    1239    1419 ..    1234    1421 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.94
  Glyco_tranf_2_3    4 lavlVptfneed.vlgevlesllaqey..prvevvvvvd 39  
                       +++ Vp++ e +  l++ l+sl a +y   r  ++v++d
       KHJ30165.1 1090 VICQVPAYTEGEdSLRKALDSLTALQYdnKRKLICVICD 1128
                       6788*****99868999******9998545566666665 PP

  == domain 2  score: 39.8 bits;  conditional E-value: 1.7e-13
  Glyco_tranf_2_3   79 lnealravk......sdlvllvDdDtvvePdtlkrllqff.ltpkvgavgtpvflln.rstlvsalgalefaerhlrflaarralg.vltln 161 
                       ++++++++       ++++l++D+Dt v  d+l rl+++  + +k++ + +   l+n +++++++ +  e+ + h+   a+   +g v++l 
       KHJ30165.1 1239 MFHQINNIIgvdpelYEYLLMIDADTSVREDSLNRLVAACaNNAKIAGICGETSLENeERSWWTMIQVYEYFISHHLAKAFESLFGsVTCLP 1330
                       444444433565666789*********************944444555555556666588*********9999999999999999868**** PP

  Glyco_tranf_2_3  162 Gsgslirrevlkele...................gldp.lflltdDyelglrlrragfrtay..vpgaavrevfpsslkayikqrnRwv 228 
                       G +s++r +  +  +                   ++ + l +l++D +l+  + ++  ++ y   p+a   ++ p++++ +  qr+Rw+
       KHJ30165.1 1331 GCFSMYRLRTADKGKpliisdaviseysdcvvdtLHKKnLLSLGEDRFLTTLMTKHFPYMSYkfIPDAYASTAAPETWSVLLSQRRRWI 1419
                       **************9*****************96555589999*******99999877777555************************7 PP

>> Myosin_head  Myosin head (motor domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   5.2e-11   1.3e-07     185     271 ..     193     284 ..     187     345 .. 0.79

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 5.2e-11
                  -TT--SBHHHHHHHHCSTH.HHHHHTT--TCCGSTTTTTTSSSS....BTTS-HHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHCTSS CS
  Myosin_head 185 akeERnyHiFYqllagase.eekkelkledvkdyaylsqsgelt....vdgiddseefketkkaldilglseeeqkeifrivaailhlGnie 271
                  ++++R + +FY ll +as+  e++ l l+ +++ya l++sg+++    +++ dd++   + +++l+ +g++ ++++++++i+a++l+lG+  
   KHJ30165.1 193 QPGNRVFDVFYFLLTSASTpAEREFLGLKPATEYALLTKSGTFNppsyLPTADDTAAADDFRNSLKAIGIKGSTHRSLISILAGLLKLGDTL 284
                  5789*********99887615677789*************98762222699**************************************853 PP

>> Glycos_transf_2  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.7   0.0    0.0094        24       4      32 ..    1094    1124 ..    1092    1130 .. 0.76
   2 !   12.3   0.0   4.3e-05      0.11      81     163 ..    1255    1338 ..    1249    1344 .. 0.69

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0094
                       EEESS-.TTTHHHHHHHHHHH.GGCCEEEEE CS
  Glycos_transf_2    4 iptyNe.ektlletlesllaq.dpypdfeii 32  
                       +p+y e e+ l+++l+sl a  ++ +++ i+
       KHJ30165.1 1094 VPAYTEgEDSLRKALDSLTALqYDNKRKLIC 1124
                       8*******************93333333333 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 4.3e-05
                       SEEEEEESSEEE-TTHHHHHHHHHHH.TTCEEEEEEEEEECCCCCCCHC-SS.EEEECCHCCCCHC.CCCCCSTTCSTCCCEEEE CS
  Glycos_transf_2   81 dyilflDaDdepdpdwleklvealekdgadvvlgqrprifgetdeiernkrv.generlyfkerkr.slkgnlsfeigsaallrr 163 
                       +y+l +DaD+ + +d l +lv+a  + +a+++  +   +  ++ + +++    +e  +  +  + + sl+g++++  g+++++r 
       KHJ30165.1 1255 EYLLMIDADTSVREDSLNRLVAACAN-NAKIAGICGETSLENEERSWWTMIQvYEYFISHHLAKAFeSLFGSVTCLPGCFSMYRL 1338
                       79*********************999.6666555555555555554444333355555555555441566688888888888885 PP

>> Glyco_transf_21  Glycosyl transferase family 21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   4.6e-06     0.012      21     109 ..    1244    1337 ..    1227    1344 .. 0.72
   2 ?   -1.9   0.0      0.79     2e+03     126     172 ..    1373    1419 ..    1371    1420 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 4.6e-06
  Glyco_transf_21   21 nllqaleaakydllvisDsdvrvkpdyLeellaaled.pkvglVts.lpvgsdakglaaaleaafl....ntlagvlqaklsglgfavGksm 106 
                       n + +++   y++l++ D+d+ v++d L++l+aa +   k++ +++ +++  +++++++ + +++       la+++ + ++ + +  G + 
       KHJ30165.1 1244 NNIIGVDPELYEYLLMIDADTSVREDSLNRLVAACANnAKIAGICGeTSLENEERSWWTMI-QVYEyfisHHLAKAFESLFGSVTCLPGCFS 1334
                       6677889999*************************98778888888466677777777755.555411322334444444466666666666 PP

  Glyco_transf_21  107 alr 109 
                       ++r
       KHJ30165.1 1335 MYR 1337
                       655 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.79
  Glyco_transf_21  126 LAeDyalgkllraa..GlkvvlspapiaqtsvprrsslrallaRqlrWa 172 
                       L eD +l++l++++   ++  + p++ a+t++p+  +++ ll++  rW 
       KHJ30165.1 1373 LGEDRFLTTLMTKHfpYMSYKFIPDAYASTAAPE--TWSVLLSQRRRWI 1419
                       8899999999999987788889999999999985..9999999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1710 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       692  (0.0385967); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.02u 0.31s 00:00:01.33 Elapsed: 00:00:00.48
# Mc/sec: 10646.94
//
Query:       KHJ30166.1  [L=793]
Description: putative zn2 cys6 dna-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.5e-09   35.4   1.5    5.5e-09   35.4   1.5    1.8  2  Fungal_trans  Fungal specific transcription factor domain
    2.4e-06   27.5  11.0      5e-06   26.5  11.0    1.5  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
      0.026   15.2   0.1       0.12   13.0   0.0    2.0  3  SRP_SPB       Signal peptide binding domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.2      0.74   4.4e+03      23      42 ..      86     105 ..      83     107 .. 0.83
   2 !   35.4   1.5   9.2e-13   5.5e-09       5     265 ..     244     486 ..     240     488 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 0.74
  Fungal_trans  23 ktssenssksayasplllla 42 
                   +++++++++s+++splll++
    KHJ30166.1  86 TYQNNSTESSPHYSPLLLNS 105
                   567889999********976 PP

  == domain 2  score: 35.4 bits;  conditional E-value: 9.2e-13
  Fungal_trans   5 fsn....fhpqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsL 97 
                   fsn    +hp fpi+ ++sf +++     +    ++p+l+ ail ++++  ++ ++++     +++        ++ i     +   + +++++q+L
    KHJ30166.1 244 FSNyeelYHPYFPIIPRESFEHTK----IPWMSRNEPHLFSAILTVASRENDTVHQIC----YDHM--------QKLISM--ILGGADANIEAVQAL 322
                   555566589***************....7777789*************9999999998....4434........333333..47788888******* PP

  Fungal_trans  98 lllelyektss...........dralherhhgvavrlarslgLhrnpsyvgkkslwklwee..eaesrrRlwwaaFylDktialklGrpp.llddsq 180
                   l+l+ + + s            + + +++++g+a+r+a+ +gL r  +            +     +   +w a+++ D+++++  G  + +   + 
    KHJ30166.1 323 LILSQWVSRSPqvnsssigkgeEDRVAWMYIGTALRIAYYIGLDRTTFKDD------ENGNsaSLHRNQLVWAACYICDRQVSIRIGKGFwTRGPDL 413
                   *****999999787776666655666677*******************999......4444003444456999*****************7655555 PP

  Fungal_trans 181 inlpLPcddddlwesddaseetlvetklsneeksrkiasfllaLkkilskiagsllsiekqlqqrdlqseklswveeleraldnW 265
                   i+   P ++++        +  + +    ++  + +i+++ l + +i s+++  l+s + ++  ++l+   ++ +e+++ ++ nW
    KHJ30166.1 414 ISEMKPSNFST--------FNQDSN----KNDDNALIFQANLEITQIFSSVHNILYSSKDHSWKEMLEGRYTEYLEDFRIRIRNW 486
                   55555555553........333333....344555679***************99999999988888877777777777777777 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5  11.0   8.4e-10     5e-06       1      31 [.      16      50 ..      16      57 .. 0.89

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 8.4e-10
                SS-HHHHHCT---ST....SSSS-HHHHHCTHHHC CS
     Zn_clus  1 haCdnCrkkKvKCda....kkPaCsnCkklnleCt 31
                +aC nCr++K+KCd     +kP C++C++ n+ C 
  KHJ30166.1 16 RACLNCRSRKSKCDLdinqGKPPCRRCQRENKVCI 50
                69*************99997777***********8 PP

>> SRP_SPB  Signal peptide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0         3   1.8e+04      52      65 ..     169     182 ..     163     192 .. 0.78
   2 ?   -2.4   0.0       1.3   7.8e+03      19      31 ..     300     311 ..     291     326 .. 0.71
   3 ?   13.0   0.0     2e-05      0.12      50      89 ..     604     645 ..     597     649 .. 0.87

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 3
                 TTSBHHHHHSGCG- CS
     SRP_SPB  52 dSMTkeErdspekl 65 
                 +++T++E+++p+  
  KHJ30166.1 169 ECITSAELENPSDA 182
                 57899999999865 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.3
                 CCCHHHHCCC... CS
     SRP_SPB  19 plskllsmiPgms 31 
                  ++kl+smi g +
  KHJ30166.1 300 HMQKLISMILG-G 311
                 68888998877.2 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 2e-05
                 HHTTSBHHHHHSGCG-..H..HHHHHHHHHTTS-HHHHHHHH CS
     SRP_SPB  50 iidSMTkeErdspekllke..sRkrRiArGsGtsvqevnell 89 
                 i++ MT+eEr++ ++++++   R ++i+ Gs    +   +ll
  KHJ30166.1 604 ITTTMTDEERQNIRTMIQNtiGRLQKISDGSNHMGSRYARLL 645
                 8999************99778**********98877777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (793 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       634  (0.0353617); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.30s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 5387.67
//
Query:       KHJ30167.1  [L=244]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       767  (0.0427799); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1659.59
//
Query:       KHJ30168.1  [L=189]
Description: putative nadh-ubiquinone oxidoreductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-17   63.9   2.8    1.8e-17   63.1   2.8    1.4  1  zf-CHCC     Zinc-finger domain
  ------ inclusion threshold ------
      0.092   13.6   2.1       0.21   12.5   2.1    1.6  1  zf-C2H2_4   C2H2-type zinc finger
        0.2   11.4   0.1       0.47   10.2   0.1    1.5  2  Collectrin  Renal amino acid transporter
       0.24   11.9   1.6       0.55   10.8   1.6    1.7  1  zf-C2H2     Zinc finger, C2H2 type


Domain annotation for each model (and alignments):
>> zf-CHCC  Zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.1   2.8     4e-21   1.8e-17       2      37 .]     134     169 ..     133     169 .. 0.97

  Alignments for each domain:
  == domain 1  score: 63.1 bits;  conditional E-value: 4e-21
                 SEEEEEESSTTSEEEEEEEE--TTSEEEETTTTEEE CS
     zf-CHCC   2 rrvaCdGgggalGHPrvyieldkkgpvdCgYCglrF 37 
                 r v+CdGggg+lGHPrv+i++dk++  +CgYCg+ F
  KHJ30168.1 134 RSVSCDGGGGPLGHPRVFINIDKPQICVCGYCGRPF 169
                 78********************************98 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   2.1   4.6e-05      0.21       2      21 ..     161     179 ..     160     181 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.6e-05
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlk 21 
                  C +Cg++F s ++ ++H++
  KHJ30168.1 161 VCGYCGRPFASEHH-RKHIE 179
                 7********99999.***97 PP

>> Collectrin  Renal amino acid transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.1   0.00011      0.47      27      75 ..      19      67 ..      11      88 .. 0.81
   2 ?    0.1   0.0      0.14   6.3e+02      40      75 ..      63      98 ..      59     107 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00011
  Collectrin 27 fkasvayamrkylseeknqtvefevenvlvlnetqrvSfwfvvtspkne 75
                 +a  aya+     ++ n+ ++++ +n+ v  + +r Sf    ++++  
  KHJ30168.1 19 VQARRAYAFGASERRRSNEPINYNSQNIAVNPNDNRLSFNAPHQNTQID 67
                678889*********************************9776666544 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.14
  Collectrin 40 seeknqtvefevenvlvlnetqrvSfwfvvtspkne 75
                +++ +q+v+ ++e++lv +  +rv +w   ++p+++
  KHJ30168.1 63 NTQIDQAVTSNTEKLLVPQAPNRVGVWSKSQNPRSK 98
                556678999999999999999999999988888766 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.6   0.00012      0.55       2      18 ..     161     176 ..     160     180 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00012
                 EETTTTEEESSHHHHHH CS
     zf-C2H2   2 kCpdCgksFkrksnLkr 18 
                 +C++Cg++F +  + ++
  KHJ30168.1 161 VCGYCGRPFASE-HHRK 176
                 8********554.4444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1484.06
//
Query:       KHJ30169.1  [L=288]
Description: putative zinc knuckle protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-10   39.4  11.1    2.3e-07   31.4  11.4    3.2  2  MPP6      M-phase phosphoprotein 6
  ------ inclusion threshold ------
        6.2    7.2  10.3         18    5.8   7.4    2.8  2  eIF3g     Eukaryotic translation initiation factor 3 subunit 


Domain annotation for each model (and alignments):
>> MPP6  M-phase phosphoprotein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4  11.4   2.5e-11   2.3e-07       2     106 ..      13     182 ..      12     253 .. 0.80
   2 ?   -0.4   2.0      0.17   1.5e+03      33     108 ..     212     223 ..     184     278 .. 0.49

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 2.5e-11
        MPP6   2 kLSsrvlnMKFMkrakkaeekkqeeeeesa............................................kklkdssewvldnpekkkkkskiks 56 
                  +S r+l MKFM+ra+ a  ++    + +                                               +  +  wvld +e++    +++ 
  KHJ30169.1  13 SMSTRLLTMKFMQRAAAAPVTSVPTISHEHskiqkkepdfnvsrqnldrlvdqnavldalakenekslaaldrlATESGDTRWVLDFMEQDHPMPSMSL 111
                 68****************999999888877778888899999888887777777777777777777777776666666666777777777777777766 PP

        MPP6  57 evsnvgfedl..............essvifGRrsFggfnkevee.......kkeeeeeeeekekeedvsde 106
                  v  +g+++l               +s+i GRrsFg fnk++e+       ++++ + e ++++++d +d+
  KHJ30169.1 112 HVVQAGYANLdnlvsqstatdkpsGESTILGRRSFGRFNKDLEKqqnphycEASTSDSEIDENNDMDSYDT 182
                 7777777777777999999****9*******************5567989966666666666666666664 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.17
        MPP6  33 klkdssewvldnpekkkkkskiksevsnvgfedlessvifGRrsFggfnkeveekkeeeeeeeekekeedvsdeel 108
                 k +  +e++                                                                  l
  KHJ30169.1 212 KRQAREELK----------------------------------------------------------------HHL 223
                 111111111................................................................111 PP

>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.67     6e+03      52      80 ..      21      48 ..       9      79 .. 0.54
   2 ?    5.8   7.4     0.002        18      73     123 ..     204     270 ..     126     271 .. 0.70

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.67
       eIF3g 52 aKfGdekgdkpgpnsatttvgeevelkle 80
                 Kf + + ++p  +   t+  e+ +++ +
  KHJ30169.1 21 MKFMQRAAAAPVTS-VPTISHEHSKIQKK 48
                55555554444433.23333355555553 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.002
       eIF3g  73 eevelkl...............eeekee.....ekeeeekekaklkkkekklvkCriCkgdHfTskCPykd 123
                 e+  l++               +   ++     ++ ++ +  ++++  +k+ ++C  C+g H  + CP+++
  KHJ30169.1 204 EKADLRVkkrqareelkhhlakK--ARQaevslNHLTSLSGRQEVN--SKSKMECYSCGGPHRKIDCPNRK 270
                 44444444444444444443421..111222222223333333333..5567****************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1417  (0.079034); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2217.44
//
Query:       KHJ30170.1  [L=139]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 1103.51
//
Query:       KHJ30171.1  [L=226]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1843.36
//
Query:       KHJ30172.1  [L=651]
Description: putative hsp70-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.5e-259  862.3   6.1   1.7e-259  862.1   6.1    1.0  1  HSP70           Hsp70 protein
    5.1e-17   61.7   0.0    6.5e-16   58.1   0.0    2.0  2  MreB_Mbl        MreB/Mbl protein
     0.0017   18.1   0.0     0.0041   16.9   0.0    1.6  1  FGGY_C          FGGY family of carbohydrate kinases, C-termin
      0.005   17.2   0.7        8.4    6.9   0.0    3.4  3  FtsA            Cell division protein FtsA
  ------ inclusion threshold ------
      0.022   14.1   0.1      0.057   12.7   0.1    1.7  1  Hydantoinase_A  Hydantoinase/oxoprolinase
      0.038   13.2   0.0      0.079   12.2   0.0    1.5  1  StbA            StbA protein
       0.17   12.1   3.9        1.6    8.9   0.6    2.5  2  MutS_III        MutS domain III


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  862.1   6.1  6.5e-263  1.7e-259       1     598 [.       4     610 ..       4     611 .. 0.98

  Alignments for each domain:
  == domain 1  score: 862.1 bits;  conditional E-value: 6.5e-263
                 EEEEEEXSSEEEEEEEETTEEEEEXXTTSXSSEESEEEEXTTSEEETHHHHHCTTTTGGGEEEXGGGTTTXBTTSHHHHHHHTTXSSEEEEETTSBEEE CS
       HSP70   1 viGiDLGttnsvvavmeggkievianeegnrttPsvvaFtkkerlvGeaAkrqavtnpkntvfsvKrliGrkfsdpevqkeikelpykvvkkengkavv 99 
                 +iGiDLGtt+s+v+++++++ie+ian++gnrttPs+vaFt++erl+G+aAk+q+++np+ntvf++KrliGrkf+dpevq+++k++p+k+v k  gk+v+
  KHJ30172.1   4 AIGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFADPEVQSDMKHFPFKIVDK-AGKPVI 101
                 59****************************************************************************************99.9***** PP

                 EEEETTE..EEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCCSS.SCEEEEEEEEXS CS
       HSP70 100 eveaage..kftpeqisamvLkklketaeaylgkkvtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldkkd.kernvlvyDlGg 195
                 ev ++ge  +ftpe+is+mvL+k+ketaeaylg++v++av+tvPaYfnd+qRqatkdAg iAGLnvlRi+NepTAaa+aYGldkk   ernvl++DlGg
  KHJ30172.1 102 EVVFKGEtkQFTPEEISSMVLTKMKETAEAYLGTQVDNAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDKKVeGERNVLIFDLGG 200
                 ******999**************************************************************************99659*********** PP

                 SXEEEEEEEEETTEEEEEEEEEETTXSHHHHHHHHHHHHHHHHHHHHSXXGGGSHHHHHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTTEEEEEEEE CS
       HSP70 196 gtfdvSilelekGvfevkaTagDthlGGedfDealvehlveefkkkegidlskdkkalqrlkeaaekaKkeLSsskqteinleietvdedgkdlsekls 294
                 gtfdvS+l++e+G+fevk+TagDthlGGedfD++lv+h+v+efk+k++ dls++ +al+rl++a+e+aK++LSs  ++++++ei++++e g d+ ++++
  KHJ30172.1 201 GTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVNEFKRKHKKDLSSNARALRRLRTACERAKRTLSS--SAQTSIEIDSLFE-GIDFYTSIT 296
                 **************************************************************************..677788999****.********* PP

                 HHHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTT.CHHBSSSHTTTHHHHHHHHHHHHHCTC...GCSHCCEEEEB CS
       HSP70 295 RakfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfg.kepsktvnpDeavaiGAAvqagvlsge...eevkdllllDv 389
                 Ra+feel++dl++ t++pv ++l+dak++k+ ++e+vlvGGstRiP++q+l+ ++f+ kep+k++npDeava+GAAvqa++lsg+   ++++++lllDv
  KHJ30172.1 297 RARFEELCQDLFRSTTTPVDRVLADAKIDKSKVHEIVLVGGSTRIPRIQKLITDYFNgKEPNKSINPDEAVAYGAAVQAAILSGDtssKSTNEILLLDV 395
                 ********************************************************99**************************97777899******* PP

                 ESS-EEEEETTTEEEEEESTTCBSSEEEEEEEEESSTTSSSEEEEEEESSSSBGGGSEEEEEEEEECESSCSTTCSEEEEEEEEETTSCEEEEEEETTT CS
       HSP70 390 tpLslgietlggvmtkliernttiptkksqvfstaadnqtaveievlqgerelvkdnkllgsfeldgippaprGvpqieVtfdidanGiltvsakdket 488
                  pLslgiet+gg mtkli+rnttiptkks+vfst++dnq+ v i+v++ger+ +kdn+llg+fel+gippaprGvpqieVtfd+danGi++vsa +k+t
  KHJ30172.1 396 APLSLGIETAGGQMTKLIPRNTTIPTKKSEVFSTYSDNQPGVLIQVFEGERQRTKDNNLLGKFELTGIPPAPRGVPQIEVTFDLDANGIMNVSALEKGT 494
                 *************************************************************************************************** PP

                 CCEEEEEEECCSS.SBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..GGGSTHHHH....HHHHHHHHHHHCHTTSSCHHHHH CS
       HSP70 489 gkeeeitieaseg.lseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslekkleee..aekvseaek....ekvesaieeLkeeleeeekeeie 580
                 gk+++i i++++g ls+e+ie+m ++ae+++++d++++ +i akn +e+++ysl+++l+++   ek++ ++k    ++++++ie+L+++ +++ kee+e
  KHJ30172.1 495 GKSNKIVITNDKGrLSKEDIERMLSEAEKYKADDEAEAGRITAKNGLESYAYSLRNTLSDSkvDEKLDTKDKeklkAQIDKTIEWLDNS-QAATKEEYE 592
                 *************9*********************************************998889999888877778899999999998.7899***** PP

                 HHHHHHHHHHHHHHHHHH CS
       HSP70 581 akteelkkvvekiaekly 598
                 ++++el++v+++i+ k y
  KHJ30172.1 593 DHQKELESVANPIMMKFY 610
                 *************98876 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0     0.054   1.4e+02       4      50 ..       5      57 ..       3      76 .. 0.61
   2 !   58.1   0.0   2.5e-19   6.5e-16      81     316 ..     125     372 ..     111     379 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.054
                EEEEE-SSEEEE..EETTTE.EEEEE......ES-EEEETTT--EEEESHHHHTTT CS
    MreB_Mbl  4 lgiDLGtantlv..yvkgkg.ivlne......psvvAikkktkkvlavGeeAkkml 50
                +giDLGt+   v  +  ++  i+ n+      ps vA++ +++    +G+ Ak+ +
  KHJ30172.1  5 IGIDLGTTYSCVgiFRDDRIeIIANDqgnrttPSFVAFTDTERL---IGDAAKNQV 57
                9*******998754555554133332222333677776554432...455555555 PP

  == domain 2  score: 58.1 bits;  conditional E-value: 2.5e-19
                 HHHHHHTSS-SS--EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT--..TTSSS-EEEEEE-SS-EEEEEEETT.EEEEEEE.... CS
    MreB_Mbl  81 fikkvkkkkslskprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglp..veepsgnmvvdiGggttevavislg.givtsks.... 172
                 + + ++    ++ ++ v++vP   ++ +r+A k+a   aG +   +i+ep aAAi  gl+  ve  +  ++ d+Gggt +v+++++  gi + ks    
  KHJ30172.1 125 MKETAEAYLGTQVDNAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDkkVEGERNVLIFDLGGGTFDVSLLTIEeGIFEVKStagd 223
                 3333333445677899***************************************77775449999999****************85378877773333 PP

                 ES-SHHHHHHHHHHHH....HHHHS..EE--HHHHHHHHHHH-BSS--HHHH.EEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTS CS
    MreB_Mbl 173 vrvaGdeldeaiikyi....rkkyn..lliGertaekikieigsavkeeeee.kmeikGrdlvtglpkevevsseevrealkepvsaiveavkevLekt 264
                  +++G+++d+ ++++     ++k++  l    r  ++++++   a+ + +++ +++i+   l +g+   ++++ ++ +e  ++ +++ ++ v +vL ++
  KHJ30172.1 224 THLGGEDFDNRLVNHFvnefKRKHKkdLSSNARALRRLRTACERAKRTLSSSaQTSIEIDSLFEGIDFYTSITRARFEELCQDLFRSTTTPVDRVLADA 322
                 589********998753333666662244445666778888888877766667999******************************************9 PP

                 -HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHHSS-.EEE-SSTTTHHHHHHH CS
    MreB_Mbl 265 ppeLaadivdrgivltGGgallkgldkllseetglp.vkvaedpltcvakGtg 316
                 + + ++ +  + ivl+GG++ +  ++kl+++ ++ +  + + +p ++va G++
  KHJ30172.1 323 KIDKSK-V--HEIVLVGGSTRIPRIQKLITDYFNGKePNKSINPDEAVAYGAA 372
                 988654.3..56*******************9976514667789999998876 PP

>> FGGY_C  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   1.6e-06    0.0041     135     196 ..     296     377 ..     255     378 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1.6e-06
      FGGY_C 135 lrailealekd..................sgkpldrlavdGGgskndllmqllAdilg..vpVerpktaeatalGaAilAav 196
                 +ra+ e+l +d                  +++++ +++++GG ++ + +++l+ d ++   p +   ++ea+a GaA+ Aa+
  KHJ30172.1 296 TRARFEELCQDlfrstttpvdrvladakiDKSKVHEIVLVGGSTRIPRIQKLITDYFNgkEPNKSINPDEAVAYGAAVQAAI 377
                 45555555444555555666666666666799***************************999999999************96 PP

>> FtsA  Cell division protein FtsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0033       8.4       1      26 [.       5      27 ..       5     159 .. 0.84
   2 !    6.4   0.0    0.0045        11       4     102 ..     197     369 ..     194     375 .. 0.56
   3 ?   -0.0   0.1      0.46   1.2e+03      40      61 ..     513     549 ..     483     625 .. 0.54

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0033
                EEEEE-SSSEEEEEEETTEEEEEEEE CS
                xxxxxxxxxxxxxxxxxxxxxxxxxx RF
        FtsA  1 alvDiGagktdvavaedgalvhlrvi 26
                +++D+G++ ++v +++d++   +++i
  KHJ30172.1  5 IGIDLGTTYSCVGIFRDDR---IEII 27
                58***************74...4444 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0045
                 EE-SSSEEEEEEETTEEEE.EEEES-....-HHHHHHH......................HHHHHT--HHHHHHHHHHH--S--..............E CS
                 xxxxxxxxxxxxxxxxxxx.xxxxxx....xxxxxxxx......................xxxxxxxxxxxxxxxxxxxxxxxx..............x RF
        FtsA   4 DiGagktdvavaedgalvh.lrvigv....ggngitkd......................iakalrtaveeAerikikyGsala..............e 61 
                 D+G+g+ dv+++  ++ ++ +++       gg+ +++                       + + lrta e A+r      s  +               
  KHJ30172.1 197 DLGGGTFDVSLLTIEEGIFeVKSTAGdthlGGEDFDNRlvnhfvnefkrkhkkdlssnarALRRLRTACERAKRTL---SSSAQtsieidslfegidfY 292
                 6666666666655543222222221133445666655555566666666666667774555555666666666666...22222344555555555551 PP

                 EEEEHHHHH...........................................GGGGSTTHHHHHHHHHT-..HH.HT-GGGHHHH CS
                 xxxxxxxxx...........................................xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx RF
        FtsA  62 keigrkels...........................................ggsalpnleelaeralspklee.vsdpeyasal 102
                         +                                           g++ +p +++l+ + ++ k+ +   +p  a+a+
  KHJ30172.1 293 --------TsitrarfeelcqdlfrstttpvdrvladakidkskvheivlvgGSTRIPRIQKLITDYFNGKEPNkSINPDEAVAY 369
                 ........04444444455555556666666666666666666666999**9***************955522335555555554 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.46
                 HHT--HHHHHHHHHHH--S--....................E CS
                 xxxxxxxxxxxxxxxxxxxxx....................x RF
        FtsA  40 alrtaveeAerikikyGsala....................e 61 
                  +   ++eAe+ k                            +
  KHJ30172.1 513 DIERMLSEAEKYKA-----DDeaeagritaknglesyayslR 549
                 34555666777762.....11111112222333333344441 PP

>> Hydantoinase_A  Hydantoinase/oxoprolinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   2.2e-05     0.057      55      98 ..     167     210 ..     117     226 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.2e-05
  Hydantoinase_A  55 vetilSGPaaGvvgaaatsklagekkvItfDmGGTstDvslikd 98 
                     v  i+  P a ++++    k +ge++v+ fD+GG ++Dvsl+  
      KHJ30172.1 167 VLRIINEPTAAAIAYGLDKKVEGERNVLIFDLGGGTFDVSLLTI 210
                     5556667888888888779********************98754 PP

>> StbA  StbA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   3.1e-05     0.079     150     198 ..     178     228 ..     160     285 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.1e-05
        StbA 150 PagfealkeldeleslLiiDlGGttLDvakvr..gklegiskvkgdskiGv 198
                   ++  +k+++   ++Li DlGG t Dv+ ++    + ++  + gd ++G 
  KHJ30172.1 178 AIAYGLDKKVEGERNVLIFDLGGGTFDVSLLTieEGIFEVKSTAGDTHLGG 228
                 446778899*******************97551145566666677777775 PP

>> MutS_III  MutS domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.2     0.024        61     151     184 ..     153     261 ..      19     332 .. 0.52
   2 ?    8.9   0.6   0.00063       1.6      78     148 ..     510     593 ..     487     613 .. 0.52

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.024
                 T..........................................................................HHHHHHHHHHHHHHHH.HHTHHHH CS
                 x..........................................................................xxxxxxxxxxxxxxxx.xxxxxxx RF
    MutS_III 151 a..........................................................................iealeqelfqelleev.eealerl 174
                                                                                             e+  ++l++++++e+ +++ ++l
  KHJ30172.1 153 RqatkdagliaglnvlriineptaaaiaygldkkvegernvlifdlgggtfdvslltieegifevkstagdthlgGEDFDNRLVNHFVNEFkRKHKKDL 251
                 134444444445555555555555555555555567777777777777777777777777777777777777666333334444455555533344555 PP

                 HHHHHHHHHH CS
                 xxxxxxxxxx RF
    MutS_III 175 rrlaealaeL 184
                  ++a+al  L
  KHJ30172.1 252 SSNARALRRL 261
                 5554444333 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00063
                 -..-HHHHHHHHHTT---HHH................HHHHHHHHHHHHTTTTT---SSTHHHHHHHHH....HHHHHHB-SS--SSGGGS-- CS
                 x..xxxxxxxxxxxxxxxxxx................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxx RF
    MutS_III  78 p..DleRllsrislgkakard................lkallealkaleelvallekeklaeseeesla....elleeaideeplalekeged 148
                 +  D+eR+ls+  + ka+  d                 ++l+++l++++   + l ++++     e+l+    + +e  +d+++ a ++e ed
  KHJ30172.1 510 SkeDIERMLSEAEKYKAD--DeaeagritaknglesyAYSLRNTLSDSK-VDEKLDTKDK-----EKLKaqidKTIEW-LDNSQAATKEEYED 593
                 235******966664443..22234443333342222455888888633.2233322222.....2444111155553.44444444443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (651 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1332  (0.074293); expected 358.6 (0.02)
Passed bias filter:                      808  (0.0450667); expected 358.6 (0.02)
Passed Vit filter:                       101  (0.00563333); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.40
# Mc/sec: 4926.91
//
Query:       KHJ30173.1  [L=149]
Description: putative 40s ribosomal protein s19 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-58  195.8   0.1    2.6e-58  195.6   0.1    1.0  1  Ribosomal_S19e  Ribosomal protein S19e


Domain annotation for each model (and alignments):
>> Ribosomal_S19e  Ribosomal protein S19e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.6   0.1   1.5e-62   2.6e-58       1     136 [.       6     142 ..       6     143 .. 0.98

  Alignments for each domain:
  == domain 1  score: 195.6 bits;  conditional E-value: 1.5e-62
                     TSSSHHHHHHHHHS--S---S-SSS-SSSS-SS-S-SS-SSTTTHHHHHHHHHHHTS--TTSGGGGS----SS-SSS-------THHHHHHHHHT CS
  Ribosomal_S19e   1 tvkdVpaeelikalaeeLkksgklevPewadlvKtgsakelapededWfyvRaAsilRkvylrgpvGverlrkvYGgkkrrgvrpshfvkasgsv 95 
                     +v+dV+a+++i+a++++Lk++gkl++P w+d+vKtg akel+p+++dWfyvRaAs++R+vylr++vGv+rlrkv+G++++rg+rpsh+v+asgs+
      KHJ30173.1   6 SVRDVDAHKFINAYSAFLKRQGKLSIPGWVDTVKTGPAKELPPQSSDWFYVRAASVARHVYLRKTVGVGRLRKVHGSTRNRGSRPSHHVDASGSI 100
                     599******************************************************************************************** PP

                     TSSS--SSS---SS.-HHHHHTHHHHH--SS--S--XXXXXX CS
  Ribosomal_S19e  96 irkilqqLeklglv.kkekkkgrrltkkGqrlldriaeevak 136
                      rk++q+Lek+g++ ++e+k+grr+t+ Gqr+ldria+++++
      KHJ30173.1 101 DRKVMQALEKIGVLeQDEEKGGRRITQGGQRDLDRIAQTCIQ 142
                     **************999999******************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.22s 00:00:00.56 Elapsed: 00:00:00.35
# Mc/sec: 1265.78
//
Query:       KHJ30174.1  [L=395]
Description: putative cell division cycle protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     3e-112  374.7   3.7   3.5e-112  374.5   3.7    1.0  1  D123      D123


Domain annotation for each model (and alignments):
>> D123  D123
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  374.5   3.7    2e-116  3.5e-112       1     305 [.      31     358 ..      31     359 .. 0.94

  Alignments for each domain:
  == domain 1  score: 374.5 bits;  conditional E-value: 2e-116
                 HHHHHGGGS--EEEES--HHHHHHHCSSSEE-----...............--------------------...HHHHHHHHHHHHHTTS-EEEE-SS- CS
        D123   1 WypkfrkltikskiiplpeefleYLeedgivlpeeseeekesaeesesdsdseesdsedeeeeeeeeeepseefpeleekikeaieelggavfpKlnws 99 
                 W+pk+r+++ikskiiplp++f++YL  dgi+l++++ + +    +s s+ d++ s+ ++ e++e+++++ps +fp+l+ekike+i+elgg v+pKlnws
  KHJ30174.1  31 WHPKYRSSAIKSKIIPLPQSFVKYLCTDGIFLSNDALPIT----SSPSSYDTDFSKFSEVENSEKSNTSPSVAFPALHEKIKESIAELGGLVAPKLNWS 125
                 ************************************9874....666777777777777777777777799**************************** PP

                 --GGGCCTSSSSS.S-BSSHHHHHHHHHT-HHHHHHHHHTTTTBT--TTS-S-TT----EEEEE-----GGGEEEEEEETTEEEEEEESSSS--THHHH CS
        D123 100 aPkDAawilaens.lkctsvndvylLLksSdfiahDLehafdeceeeeeesekeeieleLvLrkwfdlnpslefRcFVkdrkLiaisqRdlnyydflee 197
                 aPkDA+wi+++++ ++c +++d+ylL+ksSdf+a DLeh f+ +  e+++  ke+i+++LvLrkwf++n+s efRcFV++rkLiaisqRd+ny+dfl++
  KHJ30174.1 126 APKDATWISMKKNsMECATPDDIYLLFKSSDFVAFDLEHVFEGT-IEDKSICKEDIKYVLVLRKWFQVNTSFEFRCFVRRRKLIAISQRDINYFDFLSS 223
                 *********99999******************************.788899999********************************************* PP

                 THHHHHHHHHHHHHT..TTTSSSSSEEEEEEEETT..EEEEEEEEESSTTS--TTS-HHHHH................................HS-TT CS
        D123 198 lkeelkekieeffeeklkekfpdesyvfDvyvpkkldkvkliDinpfaertdslLFtweeLl...........................eeeeeeeeee 269
                 lk++++++i +ff+++lk++fpd +yvfDvy+p+++++v+l+Din++a+rtd+lLF+w+eLl                           +++ + +++ 
  KHJ30174.1 224 LKDKIRDAILNFFNKVLKDSFPDPNYVFDVYLPEPFERVRLMDINAWAPRTDPLLFSWHELLslpynessgialeqdfyqhmpqcysslKNQFSCTNNL 322
                 **************************************************************************************9998888999999 PP

                 SSS-EEE----XXXX...XXXXXXXXXXXXXXXXXXX CS
        D123 270 eeepelrlvesekdvea.nfaskeysankvPkdvvda 305
                  e pe+r+v +++d +a +fas++ysa+kvP +v +a
  KHJ30174.1 323 IEMPEFRIV-KKSDQQAfKFASPQYSAHKVPHEVAQA 358
                 9********.55556666***************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.37
# Mc/sec: 3207.83
//
Query:       KHJ30175.1  [L=364]
Description: putative glutamine synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-16   59.8   0.0    1.5e-12   47.2   0.0    2.2  2  Gln-synt_C  Glutamine synthetase, catalytic domain
    2.5e-13   49.5   0.0    3.9e-13   48.9   0.0    1.3  1  Gln-synt_N  Glutamine synthetase, beta-Grasp domain


Domain annotation for each model (and alignments):
>> Gln-synt_C  Glutamine synthetase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.2   0.0   1.7e-16   1.5e-12      21     155 ..     131     260 ..     114     278 .. 0.76
   2 !   10.4   0.0   2.6e-05      0.23     216     254 ..     311     351 ..     295     359 .. 0.83

  Alignments for each domain:
  == domain 1  score: 47.2 bits;  conditional E-value: 1.7e-16
                 EEEEEEEEEEEEESEECCCESSEEEEEEE.TB...B.TSS-.TTBHCCCC.CTCCHHHHHHHHHHHTT--EECCEEECCCTEEEEEE--EECHHHHHHH CS
  Gln-synt_C  21 tvvvgpElEFflfdkeedkeasksllevdseekgrpaekgg.yfsvapvd.eaedlrreivealealgieveashhEvatgQvEinlkfadalkaaDnv 117
                 ++ +g E E+ l+d  ++            + +g p  +g  y+ v + +   +d+++  ++a+  +gi++  + +Ev ++Q E ++ + + +++ D++
  KHJ30175.1 131 KPWFGLEQEYTLLDLLDKPY--------GWPIGGYPGPQGPyYCGVGAGKvYCRDIVEAHYKACLYAGIKISGTNAEVMPAQWEFQVGPCEGIEQGDQL 221
                 56677777777777655421........122223333333303444333226789999999************************************** PP

                 HHHHHHHHHHHHHTT-EEE-SSSSSTT.S---BEEEEEE CS
  Gln-synt_C 118 vtfKrvvkevArkhgltatFmpKpleg.dnGsgmHvhlS 155
                  + + +   +A++ g++++F+pKp+ g  nG g+H ++S
  KHJ30175.1 222 WIARFLLYRIAEEFGVKISFHPKPIIGeWNGAGLHSNFS 260
                 ************************86527*******998 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 2.6e-05
                 EEEESS-TTCSEEEE-..TSGGCSTEEEECEBTTS-HHHHH CS
  Gln-synt_C 216 lawgarNRsallRipa..skekakrvElRlpdasaNPYLal 254
                  ++g  NR +++Rip   +++    +E R p ++a PY ++
  KHJ30175.1 311 FTYGVANRGTSIRIPRevAQKGYGYFEDRRPASNADPYQIT 351
                 69**************877777888*************665 PP

>> Gln-synt_N  Glutamine synthetase, beta-Grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.9   0.0   4.3e-17   3.9e-13       3      82 ..      26     106 ..      24     107 .. 0.87

  Alignments for each domain:
  == domain 1  score: 48.9 bits;  conditional E-value: 4.3e-17
                 -EEEEEEE-SSS-EEEEEEEHHHH....HHHTTTT-E.EEETTSSTTT------EEEEEEEGGGEEE-SS-SS-.EEEEEEEEE- CS
  Gln-synt_N   3 kfvdlqFtDikgklkhvtipadel....sedaleegv.sFDGSsiegfaeieeSDmlLkPdlstavidPfreekktarvicdvyd 82 
                  +++++++D  g++++ + +++++    + ++ + +  +FDGSs+ g+a++++SD++L+P+   +++dP+r ++ +++v+ +++d
  KHJ30175.1  26 AMAEYIWIDSIGEVRSKSRTITSVpedgKIKLEDLPEwNFDGSST-GQAPGHNSDVYLRPV--AVYPDPLRGAP-NILVLTECWD 106
                 5789**********988888888865434555678888*******.***************..***********.*****99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (364 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       301  (0.0167884); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2520.86
//
Query:       KHJ30176.1  [L=769]
Description: putative alpha- sarcomeric (f-actin cross linking protein) [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.9e-45  151.5   0.2    3.8e-22   78.5   0.0    2.8  2  CH               Calponin homology (CH) domain
    7.2e-23   80.5   0.4    8.9e-21   73.8   0.0    3.0  3  EFhand_Ca_insen  Ca2+ insensitive EF hand
    2.2e-10   40.2   0.2    1.2e-05   25.1   0.1    2.7  2  CAMSAP_CH        CAMSAP CH domain
    9.7e-05   22.0   0.2     0.0035   17.1   0.0    3.2  2  EF-hand_6        EF-hand domain
     0.0019   18.6   1.2     0.0019   18.6   1.2    2.7  2  EF-hand_7        EF-hand domain pair
      0.007   15.8   0.2       0.54    9.9   0.0    3.1  3  EF-hand_1        EF hand
  ------ inclusion threshold ------
      0.011   15.5   1.4        1.8    8.5   0.2    2.9  2  EF-hand_8        EF-hand domain pair
      0.027   14.6   0.9       0.15   12.2   0.2    2.4  2  Fib_alpha        Fibrinogen alpha/beta chain family
       0.13   12.6   2.7         22    5.4   0.0    3.2  3  DUF641           Plant protein of unknown function (DUF641)
       0.19   11.8   0.8       0.97    9.6   0.2    2.2  2  zf-RRPl_C4       Putative ribonucleoprotein zinc-finger pf C4
        1.1    9.7   4.9        1.3    9.6   0.3    2.7  2  Spectrin         Spectrin repeat


Domain annotation for each model (and alignments):
>> CH  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.2   0.1   8.8e-23   1.4e-19       2     108 ..     127     231 ..     126     232 .. 0.93
   2 !   78.5   0.0   2.3e-25   3.8e-22       2     108 ..     241     346 ..     240     347 .. 0.95

  Alignments for each domain:
  == domain 1  score: 70.2 bits;  conditional E-value: 8.8e-23
                 HHHHHHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT.HHHHHHHHHHHHHHHHHHTTCHTTSS-HHHHHTTSHHHHHHH CS
          CH   2 eqkkellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnks.efkkleNinlaldvaekklgvpkvlieaedlvegknksvltl 99 
                 +q+k++++W+n ++e+  + + v d+ +dl+DGv+L++L++ l  +++   + +++ +++++eN+nl ld+++   g++ ++i+aed+v+g+ k +l+l
  KHJ30176.1 127 VQQKTFTKWLNTKIES--RDIAVVDLVKDLSDGVILIHLIECLSNESLGRYAAKPKlRVQRFENANLSLDFIR-MRGIQMTNIGAEDIVDGNRKIILGL 222
                 689***********77..788889*******************99998888887778****************.************************* PP

                 HHHHHHHHH CS
          CH 100 laqLfrafq 108
                 +++L+++f 
  KHJ30176.1 223 IWTLILRFT 231
                 *****9986 PP

  == domain 2  score: 78.5 bits;  conditional E-value: 2.3e-25
                 HHHHHHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTTHHHHHHHHHHHHHHHHHHTTCHTTSS-HHHHHT...TSHHHHH CS
          CH   2 eqkkellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnksefkkleNinlaldvaekklgvpkvlieaedlve...gknksvl 97 
                 ++k+ ll W++++++++ + v+v++f+++++DG+++c+Ll+ ++p+l+d+++l  ++ +++ N++la+d+a k++g+p++l +++d+ +   ++++s +
  KHJ30176.1 241 TAKEGLLLWCQRKTACY-EEVDVRNFTDSWNDGLAFCALLDIHRPDLIDYDAL--DKSDHRGNMQLAFDIATKEIGIPDLL-DVDDVCDvakPDERSLM 335
                 57999***********9.8899*******************************..79***********************9.***99999889999*** PP

                 HHHHHHHHHHH CS
          CH  98 tllaqLfrafq 108
                 t++a  f+af+
  KHJ30176.1 336 TYIAYWFHAFS 346
                 ****9998875 PP

>> EFhand_Ca_insen  Ca2+ insensitive EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       6.7   1.1e+04      21      48 ..     449     477 ..     447     485 .. 0.69
   2 ?    3.6   0.1     0.045        73       4      27 ..     637     660 ..     635     668 .. 0.87
   3 !   73.8   0.0   5.5e-24   8.9e-21       1      67 [.     670     739 ..     670     741 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 6.7
                      SEEHHHHHHH-TTCHH.HHHHCCSEEE-S CS
  EFhand_Ca_insen  21 YvTeedLrrellpeqa.eylierMpeysg 48 
                      Y    dLr + l ++  +   ++M + ++
       KHJ30176.1 449 YDPPADLRLNILDQEWtNLTRAEMVKAQE 477
                      55567999999988884555566776664 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.045
                      THHHHHCHHHHHCTTSSSEEHHHH CS
  EFhand_Ca_insen   4 saeqveeaFralaggKpYvTeedL 27 
                      s ++v + F + ++g+ YvT e +
       KHJ30176.1 637 SEDEVHDYFMETSNGRDYVTFEQF 660
                      889*****************9877 PP

  == domain 3  score: 73.8 bits;  conditional E-value: 5.5e-24
                      G-STHHHHHCHHHHHCTTSSSEEHHHHHHH-TTCHH.HHHHCCSEEE-STT....S-TTEEECCCHTTTT CS
  EFhand_Ca_insen   1 dvdsaeqveeaFralaggKpYvTeedLrrellpeqa.eylierMpeysgpe..gdavekayDYvsFleal 67 
                      d+++aeqv ++Fr++a+gKpYvTe dLr++l+p+ + e l++  p ++gpe  +d+  ++yDYvsF+e l
       KHJ30176.1 670 DQNTAEQVYQSFREVADGKPYVTEVDLRHSLVPDDViEKLQTIVPIHQGPElqEDRGIPQYDYVSFMEGL 739
                      89*************************************************999999**********987 PP

>> CAMSAP_CH  CAMSAP CH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   6.4e-05       0.1      12      38 ..     146     172 ..     137     214 .. 0.76
   2 !   25.1   0.1   7.3e-09   1.2e-05       5      82 ..     254     324 ..     250     327 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.4e-05
   CAMSAP_CH  12 pvedllrdlsdGvaLaalihfYcPqli 38 
                  v dl++dlsdGv L  li+++  +++
  KHJ30176.1 146 AVVDLVKDLSDGVILIHLIECLSNESL 172
                 477999**************9987765 PP

  == domain 2  score: 25.1 bits;  conditional E-value: 7.3e-09
   CAMSAP_CH   5 rslplippvedllrdlsdGvaLaalihfYcPqliklediclkesmsladslyNiqllqefcerkLgnsvfhl.tleDll 82 
                 +  +    v++++ ++ dG+a +al+   +P+li+       + ++ +d   N+ql+++ + +++g+  + l +++D+ 
  KHJ30176.1 254 TACYEEVDVRNFTDSWNDGLAFCALLDIHRPDLIDY------DALDKSDHRGNMQLAFDIATKEIGI--PDLlDVDDVC 324
                 555566789*************************88......6999******************854..4443777766 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   2.2e-06    0.0035       1      31 []     604     633 ..     604     633 .. 0.94
   2 ?    0.9   0.0      0.35   5.7e+02      11      26 ..     649     664 ..     640     669 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 2.2e-06
   EF-hand_6   1 elreaFklfDkdgdGkidaeElrkalrkalg 31 
                 e++++F++fD+d ++++   E+ +al  +lg
  KHJ30176.1 604 EFESVFRHFDRDATNCLQELEFSAALA-SLG 633
                 699***********************9.776 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.35
   EF-hand_6  11 kdgdGkidaeElrkal 26 
                  +g  ++++e++++++
  KHJ30176.1 649 SNGRDYVTFEQFIRFM 664
                 57778********998 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1         1   1.7e+03      11      43 ..     494     520 ..     468     564 .. 0.61
   2 !   18.6   1.2   1.2e-06    0.0019       3      70 ..     604     664 ..     602     665 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1
   EF-hand_7  11 lDtdgdgyldkeellrllrkifqgagegsklsd 43 
                  D+ +d+ l+ + ++ ++         + ++ d
  KHJ30176.1 494 ADKANDFALTLNTMQLAISG------LEGDVED 520
                 58888888888887744443......3322232 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 1.2e-06
   EF-hand_7   3 klkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkly 70 
                 + + +F+ +D+d ++ l + e+  +l       + g ++s++e+ + f e  +++ ++++f+ F +++
  KHJ30176.1 604 EFESVFRHFDRDATNCLQELEFSAALA------SLGLVFSEDEVHDYFME-TSNGRDYVTFEQFIRFM 664
                 56778******************9999......9**********999999.9*************998 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       6.3     1e+04      12      18 ..       3       9 ..       3      10 .. 0.89
   2 !    9.9   0.0   0.00033      0.54       1      28 [.     604     631 ..     604     632 .. 0.93
   3 ?    2.4   0.0     0.082   1.3e+02      12      26 ..     650     664 ..     649     666 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 6.3
                TSSSEEE CS
   EF-hand_1 12 DgdGkId 18
                +++G I+
  KHJ30176.1  3 NNSGVIT 9 
                89****8 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00033
                 HHHHHHHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1   1 elkeiFrefDkDgdGkIdfeEfkellkk 28 
                 e++ +Fr+fD+D +  +   Ef ++l++
  KHJ30176.1 604 EFESVFRHFDRDATNCLQELEFSAALAS 631
                 7899*******************99987 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.082
                 TSSSEEEHHHHHHHH CS
   EF-hand_1  12 DgdGkIdfeEfkell 26 
                 +g  +++fe+f++++
  KHJ30176.1 650 NGRDYVTFEQFIRFM 664
                 67779********99 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1     0.013        21      23      38 ..     600     615 ..     590     621 .. 0.82
   2 ?    8.5   0.2    0.0011       1.8       9      54 ..     624     666 ..     616     667 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.013
   EF-hand_8  23 lseeevdilfrefDtd 38 
                 +  ee++++fr+fD+d
  KHJ30176.1 600 IQLEEFESVFRHFDRD 615
                 6779***********9 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0011
   EF-hand_8   9 elrrilrilglkkglseeevdilfrefDtdgdGkisfeEFcvller 54 
                 e++ +l++lgl   +se+ev++ f+e   +g  +++fe F+ ++++
  KHJ30176.1 624 EFSAALASLGLV--FSEDEVHDYFMET-SNGRDYVTFEQFIRFMVD 666
                 899***999***..********99997.789999999999998876 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.84   1.4e+03      43      85 ..     347     389 ..     345     397 .. 0.59
   2 ?   12.2   0.2   9.2e-05      0.15      50     123 ..     474     544 ..     443     553 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.84
                 CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  43 eleeisnstkeaeelvkeikdslrekqkskkdndnvikksske 85 
                 ++e+++n  + +e+ +++++  ++ + + ++   +++ +++++
  KHJ30176.1 347 QMEKMENAGRRVEKFISSMQGAWEMRSAYERRMRELLDQIREQ 389
                 5666777777777777777777766666655444444444333 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 9.2e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  50 stkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesneqkiqkLeq 123
                 + +e++e++++ik+ lr+  + k+ nd +++  + +l   i+ l+  + +q+ ++r L+++le ++q ++k+e+
  KHJ30176.1 474 KAQEINETIRDIKNALRRSFADKA-NDFALTLNTMQLA--ISGLEGDVEDQILHVRRLKDNLEPLNQYLEKIEE 544
                 568999999*******99999999.7999888888888..***************************9999986 PP

>> DUF641  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.013        22      71     117 ..     109     156 ..      86     160 .. 0.83
   2 ?   -1.0   0.1       1.3   2.2e+03      60     103 ..     345     388 ..     339     392 .. 0.67
   3 ?    5.3   0.2     0.014        23      81     127 ..     498     544 ..     463     545 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.013
      DUF641  71 aeeseleaeiqeqrsllktyeitvkk.leaelkakdseieeLkekLee 117
                  e+s ++    eq++ + ++++t  k l+++++++d  +  L + L++
  KHJ30176.1 109 REQSLVKMAFAEQQQWITVQQKTFTKwLNTKIESRDIAVVDLVKDLSD 156
                 6788889999999999999988765549*************9999875 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.3
      DUF641  60 yrkkqkkkaseaeeseleaeiqeqrsllktyeitvkkleaelka 103
                 + +++k +++  + +++ + +q   ++  +ye ++++l  ++++
  KHJ30176.1 345 FSQMEKMENAGRRVEKFISSMQGAWEMRSAYERRMRELLDQIRE 388
                 55555555554566666667777777777888888888877776 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.014
      DUF641  81 qeqrsllktyeitvkkleaelkakdseieeLkekLeeaeksnkklek 127
                 ++    l+t++ +++ le +++ +  ++ +Lk++Le +++  +k+e+
  KHJ30176.1 498 NDFALTLNTMQLAISGLEGDVEDQILHVRRLKDNLEPLNQYLEKIEE 544
                 445557899***************************99998888875 PP

>> zf-RRPl_C4  Putative ribonucleoprotein zinc-finger pf C4 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.86   1.4e+03      46      83 ..     238     276 ..     229     282 .. 0.79
   2 ?    9.6   0.2    0.0006      0.97      54     100 ..     545     591 ..     523     598 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.86
  zf-RRPl_C4  46 ekislrdkLCtkCkeknekekeircetfee.ylkklklC 83 
                 e ++ ++ L   C++k+   +e+  ++f++ +   l +C
  KHJ30176.1 238 EGMTAKEGLLLWCQRKTACYEEVDVRNFTDsWNDGLAFC 276
                 557778889999****999999*9999987245578888 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0006
  zf-RRPl_C4  54 LCtkCkeknekekeircetfeeylkklklCkeCkervekvlkndfvk 100
                   +kC+e n +e+ +++ t++e ++ l+l k+ ++++ ++l n+ v 
  KHJ30176.1 545 VDKKCEEANIEENDFTTYTYDELRYELSLVKNSVAKKMAFLDNQVVA 591
                 5579**************************************99865 PP

>> Spectrin  Spectrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.6      0.34   5.6e+02       6     103 ..     375     478 ..     370     480 .. 0.64
   2 ?    9.6   0.3   0.00077       1.3       4      99 ..     491     581 ..     488     587 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.34
                 HHHHHHHHHHHHHHHHHHHCCSSCSSSHHHHHHHHH....HHHHHHHHHHHHHHHHHHHH.HHHHHH.HHTTHTTHHHHHHHHHHHHHHHHHHHHHHHH CS
    Spectrin   6 faqdadeleeWieekeellssedlgkdleevqallk....khkaleaelaaqqervkaln.elaekl.ldeghsaseeieerleelnerWeeLkelaae 98 
                 ++++++el++ i+e+    +   +  ++++++++        k+ ++   a+++ + +l   +++k+ + +  +  +    rl+ l++ W +L ++ + 
  KHJ30176.1 375 YERRMRELLDQIREQIIRWQGSSFIGTYADAKSQAVefssYKKGQKRKWVAEKTDLATLLsNIKTKMsTYRLRPYDPPADLRLNILDQEWTNLTRAEMV 473
                 666666666666666555544444444444444444355555556666666667776666678888866666777777788999999999999999887 PP

                 HHHHH CS
    Spectrin  99 rkqkL 103
                 + q++
  KHJ30176.1 474 KAQEI 478
                 77765 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00077
                 HHHHHHHHHHHHHHHHHHHHHCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Spectrin   4 qqfaqdadeleeWieekeellssedlgkdleevqallkkhkaleaelaaqqervkalnelaeklldeghsaseeieerleelnerWeeLkelaaer 99 
                 + fa +a+++   ++ ++  +     +    +v++++   ++l+++l+     +++++e+ +k+++++ ++++ ++++ +el+     +k  +a++
  KHJ30176.1 491 RSFADKANDFALTLNTMQLAI-----SGLEGDVEDQILHVRRLKDNLEPLNQYLEKIEEVDKKCEEANIEENDFTTYTYDELRYELSLVKNSVAKK 581
                 567777777777777775555.....556679999999********************************************98877777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (769 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1033  (0.0576162); expected 358.6 (0.02)
Passed bias filter:                      595  (0.0331865); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 5092.40
//
Query:       KHJ30177.1  [L=199]
Description: putative secreted effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
          2    8.2   0.0          2    8.2   0.0    2.5  2  DDDD         Putative mitochondrial precursor protein


Domain annotation for each model (and alignments):
>> DDDD  Putative mitochondrial precursor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0   0.00011         2      46      76 .]     153     183 ..     140     183 .. 0.88
   2 ?   -9.0  11.5         1   1.8e+04      71      76 .]     188     193 ..     186     194 .. 0.56

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00011
        DDDD  46 gllvGtliSknvAnlLeendlFvPeDDDDDd 76 
                   +vG++i k+  ++L  ++l   eD+D D+
  KHJ30177.1 153 CEVVGAVIRKKNSSYLTCKNLSKGEDEDKDE 183
                 568*************************997 PP

  == domain 2  score: -9.0 bits;  conditional E-value: 1
        DDDD  71 DDDDDd 76 
                 DDDDDd
  KHJ30177.1 188 DDDDDD 193
                 555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1461.52
//
Query:       KHJ30178.1  [L=346]
Description: putative glycosyl [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.05   13.2   0.1      0.089   12.3   0.1    1.3  1  DUF4533   Protein of unknown function (DUF4533)
      0.061   13.4   1.6        0.2   11.7   0.0    2.1  2  PMG       PMG protein


Domain annotation for each model (and alignments):
>> DUF4533  Protein of unknown function (DUF4533)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   9.9e-06     0.089      46     128 ..     126     203 ..     113     207 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 9.9e-06
     DUF4533  46 dsnikdnleqiikalkelqsvvdkkdkemkkkleepLysKlativsseveksaevkellssakeefksvagpvavkllkssnl 128
                 d+++ +++e+++k+l+++q  +     + ++  e +L  K+ ++vs   e  +    + +s  ++++++ g++  ++ ++sn+
  KHJ30178.1 126 DKSLPNVFEIMVKQLRKMQLCLR---SNFQD--EITLRDKILEAVSNTPECQSACLIPEESLNSVINNIRGAIGMSASHESNV 203
                 677889**************986...57999..99************999999888999*****************9999998 PP

>> PMG  PMG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.2e-05       0.2      37      82 ..     142     187 ..     119     209 .. 0.84
   2 ?    0.1   0.7      0.08   7.1e+02      54      79 ..     226     251 ..     217     266 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.2e-05
         PMG  37 sdrlclPsscqlssslldncqetcgeptscqssscesttsstsvcv 82 
                 + +lcl s++q++ +l+d   e   ++++cqs++  +  s +sv++
  KHJ30178.1 142 KMQLCLRSNFQDEITLRDKILEAVSNTPECQSACLIPEESLNSVIN 187
                 6789*****************************9987777666655 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.08
         PMG  54 dncqetcgeptscqssscesttssts 79 
                 + +++++++pt+   + ++++++ ++
  KHJ30178.1 226 SRFEQSYNQPTKSFDPRIKRCYCCKK 251
                 56889999999999999998887543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       984  (0.0548832); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2416.92
//
Query:       KHJ30179.1  [L=489]
Description: putative vacuolar amino acid transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.3e-91  305.3  20.5    7.9e-91  304.8  20.5    1.2  1  Aa_trans         Transmembrane amino acid transporter protein
  ------ inclusion threshold ------
       0.28   11.2   4.6      0.099   12.6   0.4    2.3  3  Abhydrolase_9_N  Alpha/beta-hydrolase family N-terminus


Domain annotation for each model (and alignments):
>> Aa_trans  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  304.8  20.5   8.8e-95   7.9e-91       3     382 ..      31     430 ..      29     434 .. 0.95

  Alignments for each domain:
  == domain 1  score: 304.8 bits;  conditional E-value: 8.8e-95
    Aa_trans   3 ssalsavlnlikaivGaGvLaLPyAfkqlGlivGlillllvallslytlllLvkcsktlasgkrnksYgdlgyrllGpkgkliidlailvqlfGvgvsy 101
                 +s ls+v+nl+++i+G+G+La P  ++q+G++vG +++l  +l+  ++l+l+++c+++l+  ++ +s+++l  ++  p++++i+d+ai++++fGvgvsy
  KHJ30179.1  31 ASSLSSVINLLNTIIGTGLLATPHVLSQMGILVGTLVILWSGLTAGFGLYLQARCARYLD--RGTSSFFAL-SQISYPNASVIFDAAIAIKCFGVGVSY 126
                 6889******************************************************96..9********.77777889******************* PP

    Aa_trans 102 liligdllpaifesffdt.....lllsnvyfilisaliiipLslipnlskLsylSllalvsslyy.ivilvlvvaelvklelkgvseetvkkasklkgl 194
                 li+ig+l+p i+ ++f++     +ll++  +i +++li+ipLs+++ l++L+y+S+lal+s+ y+ ++il++++ +++++e  ++   +      +  +
  KHJ30179.1 127 LIIIGELMPGIINGLFQQtevipCLLDRQFWITAFMLIVIPLSFVRRLDSLKYSSILALLSIGYLvVLILYHFIQQDMTSERGNIRLFKW---AGVVPT 222
                 ****************999*******************************************9976777777888888888888877775...66669* PP

    Aa_trans 195 flaigiivFAftghavlleiqnelkdpskfkkmtkvlllsiilatvlyilvGlvGYltFGnevkgnillnlpkssilivivnlllvlhlilsfplqlhp 293
                 + ++++ivFA+t+h +++++ ne++++ +      v++ si +a+++yilv+ +GYl FGnev gni   +  s     i+++++v+  ++s+plq+hp
  KHJ30179.1 223 LKSFPVIVFAYTCHQNMFSVLNEMRSNTH-RSTSTVIISSIGVAAFFYILVAITGYLSFGNEVSGNIVGMYASSI-GSSIGKVAIVILGTFSYPLQVHP 319
                 *****************************.77899************************************8776.*********************** PP

    Aa_trans 294 lrqvvenllikk......................eavagasekeapkskllrlvirlllvvityliAlsvpslakvlslvGatsstplsfilPalfhlk 370
                 +r++v+ +l+++                       ++  +   +++ s l++ +i++++++++y++A++v+sl+kvl+ vG+t+st++sfilP+lf++k
  KHJ30179.1 320 CRASVDMILRWRpihrdrtlnlsdgspsrsipllANQNRQMARNDTISELRFAFITFMIIILSYIVAMMVSSLDKVLAYVGSTGSTSISFILPGLFYYK 418
                 *********************************99999999999******************************************************* PP

    Aa_trans 371 liktekkslekl 382
                 + ++++   ++l
  KHJ30179.1 419 ISSPDSAYRQRL 430
                 ***999877766 PP

>> Abhydrolase_9_N  Alpha/beta-hydrolase family N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1      0.38   3.4e+03      99     136 ..      60      97 ..      46     105 .. 0.58
   2 ?   12.6   0.4   1.1e-05     0.099      22     144 ..     187     308 ..     180     317 .. 0.71
   3 ?   -2.3   0.0      0.43   3.8e+03      54      77 ..     371     394 ..     354     411 .. 0.49

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.38
  Abhydrolase_9_N  99 allvfalllllgrllralvrllarllgrvlprrvaavl 136
                      ++lv  l++l   l+  +  +l+++  r+l r  + ++
       KHJ30179.1  60 GILVGTLVILWSGLTAGFGLYLQARCARYLDRGTSSFF 97 
                      44444444444444444444566777777777666655 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 1.1e-05
  Abhydrolase_9_N  22 aiGYglGvllawlvrrllrlpepsrrvr.rrlrlalavvalvvllvalvlaarwQrelralmgaep..lgaaeyllvllvallvfalllllgrl 112
                       iGY++ ++l +++    +++ +s+r + r +++a +v +l  + v++++ +  Q+  + l ++++  +++++++ +  ++++ f+ +l+++ +
       KHJ30179.1 187 SIGYLVVLILYHFI----QQDMTSERGNiRLFKWAGVVPTLKSFPVIVFAYTCHQNMFSVLNEMRSntHRSTSTVIISSIGVAAFFYILVAITG 276
                      45555555555444....4445555555167899999999999999999999999999988887773366777777888888888888888888 PP

  Abhydrolase_9_N 113 lralvrllarllgrvlprrvaavlgvlvvvvl 144
                         + + ++  +  ++ + +   +g +++v+l
       KHJ30179.1 277 YLSFGNEVSGNIVGMYASSIGSSIGKVAIVIL 308
                      88888999877777777777666666666655 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.43
  Abhydrolase_9_N  54 lalavvalvvllvalvlaarwQre 77 
                       a+++ ++++l +++++ +   ++
       KHJ30179.1 371 FAFITFMIIILSYIVAMMVSSLDK 394
                      333333333333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       925  (0.0515924); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3418.32
//
Query:       KHJ30180.1  [L=184]
Description: hypothetical protein EV44_g3358 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       320  (0.0178482); expected 358.6 (0.02)
Passed bias filter:                      282  (0.0157287); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1355.79
//
Query:       KHJ30181.1  [L=323]
Description: putative zinc knuckle domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0017   17.9   0.1      0.005   16.4   0.0    1.9  2  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.16   2.9e+03       7      32 ..     231     257 ..     226     267 .. 0.63
   2 !   16.4   0.0   2.8e-07     0.005       4      35 ..     282     316 ..     276     323 .] 0.82

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.16
                 S-EEE.......-THHHHCTB--.... CS
       RVT_1   7 gsyRp.isllsvdykalnkliakrLkd 32 
                 g yR+   ll++  kal+k++++  + 
  KHJ30181.1 231 GPYRIpNRLLKHCRKALSKVLVDLFNS 257
                 667766666666666666666664444 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 2.8e-07
                 TT....S-EEE......-THHHHCTB--....... CS
       RVT_1   4 kg...pgsyRpisllsvdykalnkliakrLkdvle 35 
                 ++    + yRp++ll++ +k+l+kl+a+r+++++e
  KHJ30181.1 282 PSydtSKAYRPVALLNTVGKLLEKLVANRISKAAE 316
                 34777799***********************9974 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       997  (0.0556082); expected 358.6 (0.02)
Passed bias filter:                      639  (0.0356406); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2294.99
//
Query:       KHJ30182.1  [L=194]
Description: hypothetical protein EV44_g3773 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       464  (0.0258799); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1504.60
//
Query:       KHJ30183.1  [L=212]
Description: hypothetical protein EV44_g3518 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       466  (0.0259914); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1662.92
//
Query:       KHJ30184.1  [L=212]
Description: hypothetical protein EV44_g3852 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       541  (0.0301746); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1710.16
//
Query:       KHJ30185.1  [L=195]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.087   11.7   1.5       0.09   11.7   1.5    1.1  1  LMBR1     LMBR1-like membrane protein


Domain annotation for each model (and alignments):
>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.5     5e-06      0.09     239     328 ..      70     157 ..      13     170 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5e-06
       LMBR1 239 esdplrkyleeilkkvPeeiaeklks...nenkteeslaklekqlikalqkrertekqwkrllekalelediiknksskekefksses.srrge 328
                 +s   +k+l++i   +P  +++++++    ++  + +++k++   + +++++ ++++++ ++++      +i +nk+s++   k+++s s + +
  KHJ30185.1  70 KS--KEKNLSKIAVAIPRIASNQNQNlgtIKEVELPKIIKNNDISWATVARKGQKKARMVQNINTH----EIKRNKESQKVSYKDNSStSASDK 157
                 22..4689999*******999999997644444677777777777777777777777766666666....*********999998877544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1254  (0.0699426); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1467.56
//
Query:       KHJ30186.1  [L=339]
Description: putative serine threonine-protein kinase ksp1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-57  193.9   0.0    3.9e-57  193.6   0.0    1.1  1  Pkinase          Protein kinase domain
    5.9e-35  120.8   0.0    7.6e-35  120.4   0.0    1.1  1  Pkinase_Tyr      Protein tyrosine kinase
      1e-13   51.3   0.0    8.8e-12   44.9   0.0    2.3  2  Kinase-like      Kinase-like
    0.00057   19.3   0.0    0.00086   18.7   0.0    1.2  1  Kdo              Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0036   17.3   0.0     0.0056   16.6   0.0    1.3  1  APH              Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.029   14.5   0.1       0.21   11.7   0.1    2.0  2  CNOT11           CCR4-NOT transcription complex subunit 11
      0.044   13.5   0.0       0.08   12.7   0.0    1.3  1  Ribosomal_L7Ae   Ribosomal protein L7Ae/L30e/S12e/Gadd45 fami
        0.1   11.6   0.0       0.16   10.9   0.0    1.3  1  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.6   0.0   1.8e-60   3.9e-57       3     253 ..      20     269 ..      18     279 .. 0.91

  Alignments for each domain:
  == domain 1  score: 193.6 bits;  conditional E-value: 1.8e-60
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.....HHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH.HHSS CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkke.....kkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladlle.rkgs 94 
                 +++ l +GsfG V+ a + e+++ivA+K++ k++  ++ +     ++ ++E+k++++l  hpniv+l++++e++++++lvle+++ g+l ++++     
  KHJ30186.1  20 TISPLNHGSFGMVFMAEDLENNEIVAIKCLMKKNPVSEADsafaiDDNTEELKFHARLGnHPNIVNLIHSVETEEHIFLVLEFCSRGDLYEAIRvSTEP 118
                 5667779*************************99999988889999999*********99**********************************66666 PP

                 --HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH..TTSCB.SHHHHHHHHHHHHHHH CS
     Pkinase  95 lseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvl..keney.skkvDvWslGvilyel 190
                 l  e +++++ q+++++ey+H+kgi HrD+KpeNi++ ++gelK++DFGla+  + +  ++ +vg+ +Y+APE     + +y  +kvD+W++G+ l+++
  KHJ30186.1 119 LHTEYVRQFMLQLVNAVEYMHRKGIYHRDIKPENIFLTHSGELKLGDFGLATTQKWT--YEVMVGSDRYMAPEQFdsAGAGYsPEKVDIWAIGICLLNV 215
                 ***************************************************987764..7***************87668886789************* PP

                 HHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCST CS
     Pkinase 191 ltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRl 253
                 l+ ++pf   ++++    ++ +         +++  ++   ++s++  ++++++++ +p+kR 
  KHJ30186.1 216 LFSRNPFTRPTESDPLFLDFSR---------DMQSLFDVFPKMSQDTFEVIQQCMSLNPRKRS 269
                 ********77777766665555.........6677888999*********************6 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.4   0.0   3.4e-38   7.6e-35       4     250 ..      21     269 ..      18     273 .. 0.84

  Alignments for each domain:
  == domain 1  score: 120.4 bits;  conditional E-value: 3.4e-38
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH......HHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHH CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee......keelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrk 94 
                   + l +G+fG V++++      ++++ Va+K+l +++  +e       ++ +ee+k+  +l +hpniv+l+  +  ee++++v+e+++ GdL + +r 
   KHJ30186.1  21 ISPLNHGSFGMVFMAEDL----ENNEIVAIKCLMKKNPVSEadsafaIDDNTEELKFHARLgNHPNIVNLIHSVETEEHIFLVLEFCSRGDLYEAIRV 114
                  67899**********998....7788899999854443333111222455679********************************************* PP

                  TCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE...EEHHHHHH CS
  Pkinase_Tyr  95 kekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk...ftsksDvW 189
                  + +e+l+++ + +f+lq+ +++ey+++k + Hrd+   N++l+++   k++DfGLa +   + +y++      + ++mapE +++       +k D+W
   KHJ30186.1 115 S-TEPLHTEYVRQFMLQLVNAVEYMHRKGIYHRDIKPENIFLTHSGELKLGDFGLATTQ--KWTYEVM---VGSDRYMAPEQFDSAGagySPEKVDIW 206
                  9.******************************************************988..4444433...34568******998876745689**** PP

                  HHHHHHHHHHTTSSGTTTTSHHHH..HHHHHHTTEE.S-BBTTSBHHHHHHHHHHT-SSGGGS- CS
  Pkinase_Tyr 190 sfGvllwEiftlgespypglknee..vleklkegkr.lekpekcpeelyelmkkcweedpeeRp 250
                  + G++l  ++  +++p+++ ++++  +l++ ++ +   +   k++++  e++++c++ +p++R 
   KHJ30186.1 207 AIGICLLNVLF-SRNPFTRPTESDplFLDFSRDMQSlFDVFPKMSQDTFEVIQQCMSLNPRKRS 269
                  ********988.89998887555543777777776624667899******************95 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0      0.01        23      15      51 ..      19      55 ..      15      75 .. 0.84
   2 !   44.9   0.0   3.9e-15   8.8e-12     145     256 ..     124     228 ..     108     275 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.01
  Kinase-like 15 vrgellkkgdrsvvfevkdqetgeplavkvfllpsea 51
                 +  ++l++g +++vf ++d e +e +a+k  + ++  
   KHJ30186.1 19 KTISPLNHGSFGMVFMAEDLENNEIVAIKCLMKKNPV 55
                 56789****************9999999976655544 PP

  == domain 2  score: 44.9 bits;  conditional E-value: 3.9e-15
  Kinase-like 145 arlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlsevekgfaPpEllgsrgg.ytrknktkmthkldaWqlGlviy 241
                   r+ + lql++ + +++ kg+ h +++++n++l + g l+lg+f+   +++  + +      +  pE + s+g  y +        k+d W++G+  +
   KHJ30186.1 124 VRQFM-LQLVNAVEYMHRKGIYHRDIKPENIFLTHSGELKLGDFGLATTQKWTYEVMVGSDRYMAPEQFDSAGAgYSP-------EKVDIWAIGICLL 213
                  45555.9**************************************999999999965555667777777776665888.......689********** PP

  Kinase-like 242 riwclklPltlatee 256
                   +     P+t +te 
   KHJ30186.1 214 NVLFSRNPFTRPTES 228
                  **********99875 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   3.9e-07   0.00086     114     163 ..     117     163 ..      87     175 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 3.9e-07
         Kdo 114 e.laeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwl 163
                 e l+ e  r+ + ++  +++ +hr g++H+d+ + ni+l   +    e+ l
  KHJ30186.1 117 EpLHTEYVRQFMLQLVNAVEYMHRKGIYHRDIKPENIFLTHSG----ELKL 163
                 444445555566667789*********************9988....5555 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   2.5e-06    0.0056     152     227 ..     124     197 ..      71     204 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 2.5e-06
                 HHHHHHHH--S...SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEEECCHHHHCCHHHCSCHCCCHCHHHHHHH CS
         APH 152 vlaalaallpg...elptvllHgDlhpgNllvdpddgrvtGviDfedaglgpplyDlavllrswtseldpeflaallra 227
                 v++ +++l+ +     ++++ H+D++p N+ ++ + g++  + Df++a++   +y+++v  ++++    pe+ +  +++
  KHJ30186.1 124 VRQFMLQLVNAveyMHRKGIYHRDIKPENIFLT-HSGEL-KLGDFGLATTQKWTYEVMVGSDRYM---APEQFDSAGAG 197
                 5555555555566667899**************.44444.378***************9996656...55555555444 PP

>> CNOT11  CCR4-NOT transcription complex subunit 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   9.6e-05      0.21       2      86 ..      39     155 ..      38     162 .. 0.66
   2 ?    0.2   0.0      0.35   7.8e+02      33      47 ..     249     264 ..     227     315 .. 0.53

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 9.6e-05
      CNOT11   2 enNpkiAielLlk............llksseaneyldvlvkldvtlhslevvnrltse.......................aelpkefvhkyisnciks 65 
                 enN+ +Ai++L+k            +   ++ +e l+  ++l  + + +++++ + +e                         l++e+v++++ + +++
  KHJ30186.1  39 ENNEIVAIKCLMKknpvseadsafaI---DDNTEELKFHARLGNHPNIVNLIHSVETEehiflvlefcsrgdlyeairvstEPLHTEYVRQFMLQLVNA 134
                 89**********96655544443320...22233333333333333333333333332234444667777889999999999***************** PP

      CNOT11  66 ceeakdkeaqerlvrlvcvfl 86 
                 +e ++ k+  +r ++   +fl
  KHJ30186.1 135 VEYMHRKGIYHRDIKPENIFL 155
                 *****9999999998766666 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.35
      CNOT11  33 vtlhslevvnrlts.e 47 
                 ++ +++ev+++ +s +
  KHJ30186.1 249 MSQDTFEVIQQCMSlN 264
                 4445555555544421 PP

>> Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.6e-05      0.08      14      59 ..      11      55 ..       2      60 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.6e-05
                    TEEEESHHHHHHHHHTTTESEEEEETTSSSGGHHHHHHHHHHHTTE CS
  Ribosomal_L7Ae 14 gklvlGlkevtkalergeaklvilAedvepeekkkllealckekev 59
                    g +  G  +++  l++g   +v++Aed e +e+++ ++ l k+++v
      KHJ30186.1 11 GVILAGRFKTISPLNHGSFGMVFMAEDLENNEIVA-IKCLMKKNPV 55
                    5577888899999**********************.**99999998 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   7.3e-05      0.16     272     315 ..     119     158 ..      90     165 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 7.3e-05
  Pox_ser-thr_kin 272 slveyikfifLqiaLLyikiyelpdcenflhvDlkPdniLifds 315
                       ++ey++  +Lq+    +   e   ++   h D+kP+ni++  s
       KHJ30186.1 119 LHTEYVRQFMLQL----VNAVEYMHRKGIYHRDIKPENIFLTHS 158
                      5789999988875....4555888999************99877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2564.79
//
Query:       KHJ30187.1  [L=337]
Description: hypothetical protein EV44_g3557 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       751  (0.0418874); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2468.67
//
Query:       KHJ30188.1  [L=658]
Description: hypothetical protein EV44_g3772 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.3e-06   26.0   0.1    1.7e-05   25.0   0.1    1.4  1  rve       Integrase core domain
    0.00041   20.1   0.0    0.00071   19.3   0.0    1.4  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.1   1.9e-09   1.7e-05       5     117 ..     248     353 ..     245     354 .. 0.90

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 1.9e-09
         rve   5 gelwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpq 103
                 ++l+ vD+++++      +  +l++vd ++++  a  l++ ++++t+ a+  + ++ + g  p  ++ D ++ ++sk+f+  ++++ i++++ ++   +
  KHJ30188.1 248 NHLILVDIMYID------NNPVLHIVDEATNFQAARWLKNFSAKHTWDAIRACWIDTYIGP-PNCIVADAAKNFVSKEFHHNASSMAISMKNVPVEAHW 339
                 678888999888......357999************9999978888888888888888887.************************************* PP

         rve 104 dnGkvErfhrtlkd 117
                 + GkvEr h  +++
  KHJ30188.1 340 SIGKVERYHSCIRR 353
                 *********98876 PP

>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   7.9e-08   0.00071       4      71 ..     590     656 ..     587     658 .] 0.93

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 7.9e-08
       RVT_2   4 rlvslPkdrkaigsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaa 71 
                 rl + P + +   sr+v   k++  +++  k+rlv+q f+ k g+d+  + +P i+  s r++lal++
  KHJ30188.1 590 RLSDIPLGTRIFNSRFVDEVKNKGTDKAFEKSRLVVQAFNNK-GKDFVLTQSPTIQRVSQRVILALTV 656
                 6889999**************9999**************875.89********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (658 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       968  (0.0539907); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 4595.00
//
Query:       KHJ30189.1  [L=266]
Description: hypothetical protein EV44_g1969 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-23   81.6   0.2    9.4e-23   80.9   0.2    1.3  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.9   0.2   5.2e-27   9.4e-23       7     220 ..      78     231 ..      72     233 .. 0.95

  Alignments for each domain:
  == domain 1  score: 80.9 bits;  conditional E-value: 5.2e-27
                 S-EEE......-THHHHCTB--.........-------HHHH.............HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET....... CS
       RVT_1   7 gsyRpisllsvdykalnkliakrLkdvlekllsenqpgfrpgrstldavedllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvptklinli 105
                 g+ R      vdy+ ln++++k           +++p +++              l++  kak+++klD+ +aF++++ +e    +taf+++       
  KHJ30189.1  78 GGLRFC----VDYRGLNAITIK---------NRYSLPLMQET-------------LSRLSKAKCYTKLDIISAFNHIRIAEGQDMMTAFNTR------- 143
                 677884....5***********.........99999999999.............8999*********************************....... PP

                 ..................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHHHHHHHHHHHHHHHHTT--BEGGG-E CS
       RVT_1 106 ksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskeelqelleaveewlkesglkinpeKtk 204
                                   +g++e+ ++p+G+ ++P++f+  +ne++r++      ++++ Y+DDil +s++ ++  +++++v + l++++l+  ++K +
  KHJ30189.1 144 ------------------YGLFETLVMPFGLSNAPATFQSHINEVIRPFLD----IFCTYYIDDILTYSDDLTSDRTHVNVVLDALSKAKLHCDKKKFE 220
                 ..................9*******************************8....9******************************************* PP

                 EE.....ESSEEETTE CS
       RVT_1 205 lvlftvkseevkyLGv 220
                 +       +ev+yLG 
  KHJ30189.1 221 FE-----VQEVTYLGK 231
                 **.....8******95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1931.45
//
Query:       KHJ30190.1  [L=412]
Description: putative aldose 1-epimerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-43  149.7   0.2    1.3e-43  149.5   0.2    1.1  1  Aldose_epim  Aldose 1-epimerase


Domain annotation for each model (and alignments):
>> Aldose_epim  Aldose 1-epimerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.5   0.2   7.2e-48   1.3e-43       3     284 ..      41     381 ..      39     399 .. 0.92

  Alignments for each domain:
  == domain 1  score: 149.5 bits;  conditional E-value: 7.2e-48
                  EEEEETTEEEEEECTCTTEEEEEEETT.S..TEESB-B-STHHHHHHSC...CSSCEECSS-SEEETTEEEETTEEEECCCCBT.......TTCEETB CS
  Aldose_epim   3 itlkngaglsakislyGAtllslkvpdke..qrevllgsddaeeylkds...yfgatlgrvanRianGeFeldGkpyqlpqnee.......gknplHG 88 
                  +t+k   + +a+++ yGA +  l   d +  +r+++ g d+a+ y  d+   +fg + gr+anRi+n +F +dG +y++ +ne+       g n+lHG
   KHJ30190.1  41 YTIKGT-EIRASFVPYGASISNLFITDIHgvERDIIAGWDNASYYTIDRqhpHFGGVPGRYANRIKNSSFVIDGETYHVLPNENptfenpnGINTLHG 137
                  777775.79******************99************9999887789*********************************************** PP

                  SGGG...SB-EEEEEEETTEEEEEEEEEEETCHCSTSEEEEEEEEEEETTEEEEEEEEEEESSS-EEEEEEEEEEEETSSC......TCTGGEEEEEE CS
  Aldose_epim  89 garg...reWeveevkeddgvtvslvlkpdgeegypgdlevrvtytLnednelkieyeatndgkptpfnltnHtYFnlsge......sidshelqiea 177
                  g  g   r+W+v+e  e +++t+sl++ pdg+eg+pg++   v+ytL++ + ++  ++a +++k+tp+ lt HtY+nl g       +  +h+l +  
   KHJ30190.1 138 GPDGwdwRNWTVTELLE-NSITFSLTD-PDGKEGFPGEVISYVSYTLGNMT-WEFRMTALSTTKKTPIMLTSHTYWNLDGFanndteTALNHTLWLPF 232
                  ****9999999999995.*********.*********************88.99999999999****************9999999999999999987 PP

                  .EEEEEECTTSGEEEEEE.ECTTCCCCC.CSSEEHCSSET.............EEEEEEEESSC...........SEEEEEETTTTEEEEEEEETTSS CS
  Aldose_epim 178 .deylevdeeliptgelk.dvkgtpfdf.rqpkaigedlk.............glDhayllksk...........lkaviidpdkksgiklevsttep 248
                    + + +d  lip g++  +v+g p df ++pk+ig +l              g+D +y ++ +             +v+++++  sgi+l+ +t++ 
   KHJ30190.1 233 aGQRVGTDTILIPKGDILdNVQGDPNDFwSAPKEIGANLTspsmlgncgyncsGYDTCYINNRRpyslkanwssnELPVARLQSSWSGIQLDLFTNQD 330
                  699999**********8736889999999*********99**********************99**********999********************* PP

                  EEEEEECTTTT...............SEECCEEESSECTCETCCCECHHHT CS
  Aldose_epim 249 alvvytgnflk...............kylsreglaletqmlpdepnhpefp 284
                  a++vy+  +++                 +++  + le++  +d +n pe+ 
   KHJ30190.1 331 AMQVYSCQGQNgsialkktqgrpenrFIQKYGCVVLEPEDWIDGINYPEWA 381
                  ******999998888888888888865556666677888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2901.03
//
Query:       KHJ30191.1  [L=168]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       591  (0.0329634); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1298.87
//
Query:       KHJ30192.1  [L=348]
Description: putative atp binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.9e-75  253.1   0.1    1.3e-74  251.0   0.0    1.8  2  ATP_bind_1    Conserved hypothetical ATP binding protein
    0.00077   18.5   0.0     0.0015   17.6   0.0    1.4  1  MeaB          Methylmalonyl Co-A mutase-associated GTPase Mea
     0.0077   15.9   0.0      0.016   14.9   0.0    1.4  1  AAA_29        P-loop containing region of AAA domain
  ------ inclusion threshold ------
      0.012   14.9   0.0      0.024   13.9   0.0    1.5  1  Zeta_toxin    Zeta toxin
      0.016   15.2   0.0        6.6    6.6   0.0    2.5  2  AAA_31        AAA domain
      0.029   14.4   0.2        1.3    9.2   0.0    2.8  2  MMR_HSR1      50S ribosome-binding GTPase
      0.059   12.8   0.0      0.098   12.1   0.0    1.3  1  KTI12         Chromatin associated protein KTI12
      0.078   13.4   1.2       0.54   10.7   0.0    2.2  2  RNA_helicase  RNA helicase
       0.21   12.1   1.2       0.57   10.7   0.1    2.1  2  AAA_18        AAA domain


Domain annotation for each model (and alignments):
>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  251.0   0.0   6.5e-78   1.3e-74       1     239 [.       7     255 ..       7     257 .. 0.98
   2 ?   -0.5   0.3      0.44   8.7e+02     175     206 ..     289     320 ..     276     338 .. 0.45

  Alignments for each domain:
  == domain 1  score: 251.0 bits;  conditional E-value: 6.5e-78
  ATP_bind_1   1 vvGpaGsGKttfvgalseilelrgrsvavvNLDPAaeelpYeaavdirelitledvmedlglgpngalvvaleflresldwldeelekeeddyllfDtP 99 
                 vvG +GsGK+t++  ++++++++gr++ +vNLDPA++ + Y++++dir++i+led+me+ +lgpng++ +a+e l+++++wl++ l++  +dy+lfD+P
  KHJ30192.1   7 VVGSPGSGKSTYCDGMQQFMSTIGRKCSIVNLDPANDLMRYSPEIDIRDFIKLEDIMEEDNLGPNGGILYAFEELENNIEWLEKGLNELGEDYVLFDCP 105
                 89************************************************************************************8889********* PP

  ATP_bind_1 100 GQielfthseslakiveeLes.efalvvvyLvDsqrltdptkfisgllsalsamlrlelPhvvvlnkfDllkek..lekeleffedvealslllekee. 194
                 GQ+el+th+ sl++i+  L++  ++lvv++L Ds +lt p+ +is+l+++l+aml+++lPh++vl+k+D ++++  l ++l+f+++v++ls+ll + + 
  KHJ30192.1 106 GQVELYTHHFSLRNIFLGLQKmGYRLVVIHLSDSYCLTLPSLYISNLILSLRAMLQMDLPHLNVLTKIDKISSYppLPFNLDFYTEVHDLSYLLPHLKe 204
                 ************************************************************************99*******************999888 PP

  ATP_bind_1 195 .......ekykklaeaiaelleefalvlrflplssekeesiedllslideal 239
                        +k+++l++ai el++ f+lv  f +l+ e+++s+  ll+ id a 
  KHJ30192.1 205 essimggSKFESLNSAIIELVQGFGLV-GFETLAIESKKSMIHLLQIIDRAG 255
                 99*************************.*********************875 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.44
  ATP_bind_1 175 keleffedvealslllekeeekykklaeaiae 206
                 + ++   + +++++ +++++ +  + ++++ +
  KHJ30192.1 289 RWIDAKDEYDKYEAQKQLDQYQEMNDTNKMQD 320
                 44444444444444444444222222222222 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   7.4e-07    0.0015      34      69 ..       7      42 ..       5      48 .. 0.93

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 7.4e-07
                EEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE---- CS
        MeaB 34 ltGvPGaGkstlvealglelrrrGkrvavlavDPss 69
                + G+PG+Gkst  + + + +   G++ +++ +DP+ 
  KHJ30192.1  7 VVGSPGSGKSTYCDGMQQFMSTIGRKCSIVNLDPAN 42
                579*******************************86 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0     8e-06     0.016      25      46 ..       5      26 ..       2      32 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 8e-06
      AAA_29 25 tlltGpsGsGKSTllDAiqalL 46
                 l++G  GsGKST  D +q  +
  KHJ30192.1  5 QLVVGSPGSGKSTYCDGMQQFM 26
                599***************9876 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.2e-05     0.024      16      51 ..       2      40 ..       1      54 [. 0.80

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.2e-05
  Zeta_toxin 16 PklillgGqpGAGKselaellkdele...rqgnvvrldp 51
                P + l++G+pG+GKs+  + +++ +    r+ ++v ldp
  KHJ30192.1  2 PFAQLVVGSPGSGKSTYCDGMQQFMStigRKCSIVNLDP 40
                8899******************99988777888888886 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0066        13      12      42 ..      12      42 ..       9      55 .. 0.92
   2 ?    6.6   0.0    0.0033       6.6      99     134 ..      80     113 ..      72     117 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0066
      AAA_31 12 GvGKTTtsvnlaaalaklgkkvLlvDlDpQa 42
                G GK+T +  + +++++ g k  +v+lDp +
  KHJ30192.1 12 GSGKSTYCDGMQQFMSTIGRKCSIVNLDPAN 42
                99**************************965 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0033
      AAA_31  99 elekkeeilkellekvkdeYDyiiiDcpPsLgllte 134
                 ele++ e l++ l+++ +  Dy+++Dcp +++l+t 
  KHJ30192.1  80 ELENNIEWLEKGLNELGE--DYVLFDCPGQVELYTH 113
                 555666667777777766..88*********99986 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00064       1.3       4      86 ..       7     137 ..       5     172 .. 0.57
   2 ?   -0.4   0.0       0.6   1.2e+03      33      60 ..     235     265 ..     216     332 .. 0.49

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00064
                 EEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEE.................................................EEEEE CS
    MMR_HSR1   4 ivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgke.................................................ielvD 52 
                 +vG p +GKSt    + +    i  +   + +d+    ++++  +                                                 ++l D
  KHJ30192.1   7 VVGSPGSGKSTYCDGMQQFmSTIGRKCSIVNLDPANDLMRYS--PeidirdfikledimeednlgpnggilyafeelenniewlekglnelgedYVLFD 103
                 677777777777777766422233444455555555544422..112233333344444444555555555555555555555555555555559**** PP

                 CGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT CS
    MMR_HSR1  53 tpGliegaseekglgkaflaleeadlillvvdas 86 
                 +pG +e    + +l++ fl l+++   l+v+ +s
  KHJ30192.1 104 CPGQVELYTHHFSLRNIFLGLQKMGYRLVVIHLS 137
                 ***6663334459999999999988777777766 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.6
                 SSSEEEEEEEETTEEEEEEECGGCS.....SHH CS
    MMR_HSR1  33 TrdinegrvklkgkeielvDtpGli.....ega 60 
                 T+ i+ ++  +  + ++++D +G +     ega
  KHJ30192.1 235 TLAIESKKSMI--HLLQIIDRAGGYafggaEGA 265
                 55555555443..34677777774322222111 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.9e-05     0.098       5      38 ..       6      39 ..       1      52 [. 0.88

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4.9e-05
                EEE--TTSSHHHHHHHHHHHHHHTT--EEEE-TH CS
       KTI12  5 vltGlPssGKstrakeLakaleeekrsvvvidde 38
                ++ G P sGKst+ + +++ ++  +r++ +++ +
  KHJ30192.1  6 LVVGSPGSGKSTYCDGMQQFMSTIGRKCSIVNLD 39
                689*************************999865 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00027      0.54       3      37 ..       7      38 ..       5      60 .. 0.77
   2 ?    0.3   1.2      0.47   9.3e+02      35      66 ..     297     330 ..     278     341 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00027
  RNA_helicase  3 lyGpsgeGKStlakeLakallkklklkkkdsvysr 37
                  ++G++g GKSt+++  ++++++++   +k s++  
    KHJ30192.1  7 VVGSPGSGKSTYCDG-MQQFMSTI--GRKCSIVNL 38
                  89*************.77777777..444555554 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.47
  RNA_helicase  35 ysrnpeddfwdgYt.gqevvvidDfgqvkdee.n 66 
                   y +  +++ +d+Y+  ++ + ++D++   d++  
    KHJ30192.1 297 YDKYEAQKQLDQYQeMNDTNKMQDIADYDDDMeA 330
                   5556678888888888888888888888877322 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00028      0.57       2      44 ..       6      69 ..       6     139 .. 0.56
   2 ?   -0.7   0.1      0.96   1.9e+03      42      65 ..     295     319 ..     256     335 .. 0.56

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00028
      AAA_18  2 lltGtpGvGKttlakeLskrl.gf....................gvnlrdvakenglllevdpe 44
                l+ G pG+GK+t ++  ++ +  +                     + +rd +k +++ +e++  
  KHJ30192.1  6 LVVGSPGSGKSTYCDGMQQFMsTIgrkcsivnldpandlmryspEIDIRDFIKLEDIMEEDNLG 69
                589***********99966542225555545555555555555544444444444444444433 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.96
      AAA_18  42 dpe.aldeskrldedkldklldale 65 
                 d++ +++ +k+ld+ + ++  ++++
  KHJ30192.1 295 DEYdKYEAQKQLDQYQEMNDTNKMQ 319
                 2223444444444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       707  (0.0394333); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 2712.71
//
Query:       KHJ30193.1  [L=174]
Description: putative rpp14 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.6e-37  126.1   0.0    7.3e-37  125.7   0.0    1.1  1  RNase_P_Rpp14  Rpp14/Pop5 family


Domain annotation for each model (and alignments):
>> RNase_P_Rpp14  Rpp14/Pop5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.7   0.0   4.1e-41   7.3e-37       1     103 []       7     133 ..       7     133 .. 0.95

  Alignments for each domain:
  == domain 1  score: 125.7 bits;  conditional E-value: 4.1e-41
                    EEEEEEEEESS............................-HHHHHHHHHHHHHHHHHHHHHHH--..EEEEEETTTTEEEEEEEGGGHHHHHHHHH CS
  RNase_P_Rpp14   1 RYllveilypdeee......................elteksllkairesvqelfGdyglgklgsslsvkyfspatstaiiRcsresyrlvwaaLt 74 
                    RYllv+i+yp + e                      +lt++ llk +r+ v +lfGdyg+g+++ slsvky+spatst+i+R++r++y++vwaaLt
     KHJ30193.1   7 RYLLVNIIYPGP-ElhqkavkvetpnvlifnqpttdDLTSQVLLKSLRSMVLNLFGDYGAGAIADSLSVKYLSPATSTFILRVARAHYKYVWAALT 101
                    9**********6.3456788899999999*9999977*********************************************************** PP

                    T--EE...TTEEEEEEEEEEESSHHHHHHHTT CS
  RNase_P_Rpp14  75 litki...egrpvvfrvvrvsGTikkaeeeai 103
                    ++t++   +g+++vfrv+rvsGTi+k e+e+i
     KHJ30193.1 102 FMTSVpvkDGKKCVFRVIRVSGTIRKSEQELI 133
                    *****************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.74
# Mc/sec: 712.42
//
Query:       KHJ30194.1  [L=373]
Description: putative ser thr protein phosphatase family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2677.53
//
Query:       KHJ30195.1  [L=285]
Description: hypothetical protein EV44_g4097 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00037   20.1   0.0    0.00055   19.5   0.0    1.3  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   3.1e-08   0.00055     165     220 ..       4      85 ..       1      87 [. 0.93

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 3.1e-08
                 ECTTEEEEEESSHHH......HHHHHHHHHHHHHHTT--BEGGG-EEE.........................ESSEEETTE CS
       RVT_1 165 rYaDDililskskee......lqelleaveewlkesglkinpeKtklvlft...................v.kseevkyLGv 220
                  ++DD+ +++ ++++      l+ +  ++ +w+k++g +++peK +l++f                       ++e+k+LGv
  KHJ30195.1   4 GFVDDTNLVVWGRSArencytLELAHGKCLAWAKRYGAEFAPEKYQLIHFSrkrgssedlkekivleditInPRSEIKVLGV 85 
                 69********99999999***********************************************9998636*********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2237.42
//
Query:       KHJ30196.1  [L=467]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.084   12.8   0.5       0.24   11.4   0.5    1.8  1  AT_hook   AT hook motif


Domain annotation for each model (and alignments):
>> AT_hook  AT hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.5   1.3e-05      0.24       1      11 [.     411     421 ..     411     423 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.3e-05
     AT_hook   1 kRkRGRPrKaa 11 
                 kR+ GRPrK+a
  KHJ30196.1 411 KRGLGRPRKDA 421
                 8********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       883  (0.0492498); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3332.51
//
Query:       KHJ30197.1  [L=774]
Description: putative serine threonine-protein kinase ksg1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.9e-66  222.1   0.0    1.2e-65  221.5   0.0    1.3  1  Pkinase        Protein kinase domain
      8e-30  104.0   0.0    6.9e-29  100.9   0.0    2.1  1  Pkinase_Tyr    Protein tyrosine kinase
    0.00037   19.6   0.0    0.00091   18.3   0.0    1.6  1  Haspin_kinase  Haspin like kinase domain
     0.0031   16.9   0.0     0.0057   16.0   0.0    1.3  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0042   17.1   0.1      0.007   16.3   0.1    1.3  1  APH            Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.023   14.3   0.6          3    7.4   0.0    2.5  2  FTA2           Kinetochore Sim4 complex subunit FTA2
      0.049   13.0   0.8       0.18   11.1   0.0    2.2  2  Kinase-like    Kinase-like


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  221.5   0.0   4.6e-69   1.2e-65       2     264 .]     195     465 ..     194     465 .. 0.95

  Alignments for each domain:
  == domain 1  score: 221.5 bits;  conditional E-value: 4.6e-69
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HH CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgslsee 98 
                 e  + lGeGs+++V+ +++k+t k++A+K+++k+++  +k+ k v  E   l++l  hp ivrly++f+++++ly vl++++ggel  +l+r+g+++e 
  KHJ30197.1 195 EFGRILGEGSYSQVVLGKDKQTLKEYAIKILDKKHIIREKKvKYVNIEKDTLNRLTqHPGIVRLYYTFQDSTSLYYVLDLASGGELLGVLKRNGMFDEV 293
                 67899*******************************99999899999********99****************************************** PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS...................BCTTTSCGGGS-HHHHTTSCBSHHH CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk...................ltsfvgtseYlAPEvlkeneyskkv 178
                  ++++ +qil ++e++H++g+iHrDlKpeN+L+d++ ++KitDFG ak l    +                   ++sfvgt eY++PE+l+e++  k++
  KHJ30197.1 294 CTRFYGAQILDAIEHMHNRGVIHRDLKPENLLVDDQMHIKITDFGTAKLLPDPRNpqgslskfdaspdsedslrAKSFVGTAEYVSPELLTEKSACKAS 392
                 **********************************999*************9999899****************************************** PP

                 HHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 179 DvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 D+W+ G+i+y+ll+g+ppf++ ++ ++++k++             +++++ + +++  a+dl+++ll  +p+kRlt+e++++h+++
  KHJ30197.1 393 DLWAFGCIIYQLLAGRPPFKAGNDYQTFQKIV-------------SLEYEFPPDFPGLARDLVERLLVLEPQKRLTIEHIKSHSFF 465
                 ********************555555333333.............45899**********************************98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.9   0.0   2.7e-32   6.9e-29       2     257 ..     195     461 ..     194     463 .. 0.83

  Alignments for each domain:
  == domain 1  score: 100.9 bits;  conditional E-value: 2.7e-32
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE.STTSSHHHHHHHHH.HHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtl.keeateeekeelle.eakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkke 96 
                  e+g+ lGeG++++Vv g+ k    ++  + a+K+l k++  +e+k + ++ e +++++l +hp iv+l+    ++ +l+ v+++++gG+Ll  L+++ 
   KHJ30197.1 195 EFGRILGEGSYSQVVLGKDK----QTLKEYAIKILdKKHIIREKKVKYVNiEKDTLNRLtQHPGIVRLYYTFQDSTSLYYVLDLASGGELLGVLKRN- 287
                  68999************999....888999*****5344444455566666*********************************************9. PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE................EETTSSTSGGGGS-HHHHH CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey................vkkeeaklpvkWmapEslk 178
                     ++   +  + +q+ +++e+++++ ++Hrdl   N L+++++++ki+DfG a+ + +  +                  ++++     ++++pE l+
   KHJ30197.1 288 -GMFDEVCTRFYGAQILDAIEHMHNRGVIHRDLKPENLLVDDQMHIKITDFGTAKLLPDPRNPqgslskfdaspdsedsLRAKSFVGTAEYVSPELLT 384
                  .778888888899***************************************99977322211122233333222222233334445678******** PP

                  HSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 179 ekkftsksDvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  ek+  ++sD W+fG +++ ++  g+ p++  ++ ++++k+ +  + e p + p    +l+++ +  +p++R t++++ +
   KHJ30197.1 385 EKSACKASDLWAFGCIIYQLLA-GRPPFKAGNDYQTFQKIVSL-EYEFPPDFPGLARDLVERLLVLEPQKRLTIEHIKS 461
                  *********************9.**********9999999654.45677789999999999999999999999999865 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   3.6e-07   0.00091     143     257 ..     218     343 ..     202     355 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 3.6e-07
  Haspin_kinase 143 kelslkelkslklvkgtypglllllqdkvlkek.........pdfyseqqlflvlllkdkGtdLeevklk.swkqalsifwqivkiLyvaEtkfe. 227
                    ke  +k l + ++++ +  + + + +d +++             f++++ l+ vl l  +G+ L  +k +  ++++   f+  ++iL + E   + 
     KHJ30197.1 218 KEYAIKILDKKHIIREKKVKYVNIEKDTLNRLTqhpgivrlyYTFQDSTSLYYVLDLASGGELLGVLKRNgMFDEVCTRFYG-AQILDAIEHMHNr 312
                    55555555555555555455555555555555455555555578899******************99666156888888885.7999999987653 PP

  Haspin_kinase 228 .FEHRdLhldniLvdknlnvtlidlklsRle 257
                       HRdL+ +n Lvd+++++ + d+  ++l 
     KHJ30197.1 313 gVIHRDLKPENLLVDDQMHIKITDFGTAKLL 343
                    378**********************999875 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.2e-06    0.0057     125     167 ..     300     338 ..     278     350 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.2e-06
         Kdo 125 kavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDld 167
                  ++  +i+ +h++gv H+dl + n+l++ +     +i + D+ 
  KHJ30197.1 300 AQILDAIEHMHNRGVIHRDLKPENLLVDDQM----HIKITDFG 338
                 577789*********************9997....77777775 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   2.7e-06     0.007     161     198 ..     310     342 ..     286     344 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.7e-06
                 -SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EE CS
         APH 161 pgelptvllHgDlhpgNllvdpddgrvtGviDfedagl 198
                 +    ++++H+Dl+p Nllvd d+ ++  + Df++a+l
  KHJ30197.1 310 H---NRGVIHRDLKPENLLVD-DQMHI-KITDFGTAKL 342
                 4...6899*************.77887.8999999975 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.1     0.008        20      18      80 ..     189     251 ..     181     255 .. 0.69
   2 ?    7.4   0.0    0.0012         3     179     205 ..     300     326 ..     280     341 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.008
        FTA2  18 fsaekdiefleyLgkglhsiVlkvkirgk..eYALKlFrfleaeele.eaeedlkiprealkelas 80 
                 +   +d+ef  +Lg+g  s+V+  k ++   eYA+K+  + +    + ++ ++ +i++ +l++l++
  KHJ30197.1 189 KGV-RDFEFGRILGEGSYSQVVLGKDKQTlkEYAIKILDKKHI--IReKKVKYVNIEKDTLNRLTQ 251
                 333.59*************999777666555*****8765533..223666666666666666655 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0012
        FTA2 179 pkllrdlkklhklgIvvrDlkeenyid 205
                  ++l+ ++ +h+ g+++rDlk+en++ 
  KHJ30197.1 300 AQILDAIEHMHNRGVIHRDLKPENLLV 326
                 5899*******************9863 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       0.4     1e+03       9      45 ..     189     225 ..     183     247 .. 0.82
   2 ?   11.1   0.0   6.9e-05      0.18     143     189 ..     292     338 ..     278     446 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.4
  Kinase-like   9 erertlvrgellkkgdrsvvfevkdqetgeplavkvf 45 
                  ++ r +  g +l++g  s v++ kd++t+++ a+k+ 
   KHJ30197.1 189 KGVRDFEFGRILGEGSYSQVVLGKDKQTLKEYAIKIL 225
                  56677778999*****************999999875 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 6.9e-05
  Kinase-like 143 tiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggft 189
                  +++     +q++  + +++++g++h +++++nll d +  +++++f+
   KHJ30197.1 292 EVCTRFYGAQILDAIEHMHNRGVIHRDLKPENLLVDDQMHIKITDFG 338
                  5666666789999999*****************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (774 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 5291.20
//
Query:       KHJ30198.1  [L=359]
Description: hypothetical protein EV44_g1792 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-05   24.9   0.0    4.3e-05   23.7   0.0    1.7  1  Retrotrans_gag  Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.0   2.4e-09   4.3e-05       4      88 ..      54     148 ..      51     177 .. 0.75

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 2.4e-09
  Retrotrans_gag   4 stslegaAkswlkslv..arsida.....sesWkdlkkaflktf...lpserkdqleeelsslrQ.gtesvreYvtrfktladqldevlteeaki 87 
                      + l+g+A+ wl+s++  ++ id+      +  + lk+a++++f   + ++++   ++e++s++Q ++e +  Y+ r k+l++++  +++e  ++
      KHJ30198.1  54 EILLDGDAAMWLDSSKmfRDIIDNrqqatENDVEALKEALKAEFpirVVERTEGNVQQEIRSFKQfPEEPLLTYYGRAKHLLRRAY-GRDEPVQV 147
                     678999999999998733444555888887778888888887775555669999*******************************9.58884444 PP

  Retrotrans_gag  88 e 88 
                     +
      KHJ30198.1 148 N 148
                     3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2710.34
//
Query:       KHJ30199.1  [L=450]
Description: hypothetical protein EV44_g1546 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.057   13.5   0.5      0.098   12.7   0.5    1.3  1  Insulin_TMD  Insulin receptor trans-membrane segment
        0.1   13.2   0.4       0.39   11.4   0.1    2.2  2  DUF4690      Small Novel Rich in Cartilage


Domain annotation for each model (and alignments):
>> Insulin_TMD  Insulin receptor trans-membrane segment
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.5   1.1e-05     0.098       8      42 ..     190     222 ..     187     226 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.1e-05
  Insulin_TMD   8 yldpsnivkIvigPviciillllvigavfvvvkKr 42 
                  ++dp  ++ Ivig v ++++l+++i  +f  ++Kr
   KHJ30199.1 190 KVDPGAVAGIVIGVVNVFVILSGLILCIF--LRKR 222
                  689999*******************9976..4554 PP

>> DUF4690  Small Novel Rich in Cartilage
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   4.3e-05      0.39      26      92 ..     156     221 ..     134     223 .. 0.73
   2 ?   -2.4   0.0      0.87   7.8e+03      32      56 ..     348     373 ..     325     380 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.3e-05
     DUF4690  26 sttkeresdltdlpastselepeDtthlerldeeegslGPGaiaaiviaalLgasvllaLvv.itLrk 92 
                 +tt   + +++++p+  ++++   +  ++  ++e   + PGa+a ivi ++    +l  L+  i Lrk
  KHJ30199.1 156 ATTDRPTATSSEPPMILMSTNSMSSPSSNPQNTE--KVDPGAVAGIVIGVVNVFVILSGLILcIFLRK 221
                 5666666667776666666666666666666666..899**********9877777777774256665 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.87
     DUF4690  32 esdltdlpas.tselepeDtthlerl 56 
                 ++ +t  p++  +e+e +Dt + + +
  KHJ30199.1 348 PNFQTSSPIYrNTEIEDDDTLEYHSV 373
                 33444445541566788888777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3393.16
//
Query:       KHJ30200.1  [L=101]
Description: hypothetical protein EV44_g3189 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       245  (0.013665); expected 358.6 (0.02)
Passed bias filter:                      218  (0.0121591); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 795.44
//
Query:       KHJ30201.1  [L=865]
Description: hypothetical protein EV44_g3593 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (865 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       674  (0.0375927); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.68u 0.26s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 5660.49
//
Query:       KHJ30202.1  [L=323]
Description: hypothetical protein EV44_g1318 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.52    9.7   6.3        2.3    7.6   0.2    2.9  3  FAM35_C   Protein family FAM35, C-terminal


Domain annotation for each model (and alignments):
>> FAM35_C  Protein family FAM35, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.2      0.04   7.1e+02      30      56 ..      11      37 ..       2      52 .. 0.63
   2 ?    4.1   0.1    0.0015        27      42      75 ..     111     147 ..      99     156 .. 0.75
   3 ?    7.6   0.2   0.00013       2.3      42      81 ..     183     228 ..     160     232 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.04
     FAM35_C 30 ldastslesilaslsditytGCakCgl 56
                l+++ s + i ++ s+  ++ C+ C  
  KHJ30202.1 11 LQSQPSTNYIKNIASNTYFKTCSTCRN 37
                555555555555555666666666644 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.0015
     FAM35_C  42 slsditytGCak.CgleletD..enkiykqCysCLpl 75 
                  l+ +  +GC k C  +l  D  +n+ +kqC  C   
  KHJ30202.1 111 NLTFVLCKGCKKnCHPDLFHDpiRNRSFKQCSDCRRR 147
                 566677788875588888777668**********655 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.00013
     FAM35_C  42 slsditytGC....akCglel..etDenkiykqCysCLpltavkry 81 
                 ++ d  y  C    + C++el  +  +n++y  C+ C    + +ry
  KHJ30202.1 183 AVIDTAYINCrmcrNDCSSELfaNSASNSLYATCLDCRTRDHARRY 228
                 555666777722223578998445668**********999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       776  (0.0432818); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2285.66
//
Query:       KHJ30203.1  [L=328]
Description: putative atpase synthesis protein 25 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-12   47.2   0.0    7.6e-12   45.5   0.0    1.9  1  RsfS      Ribosomal silencing factor during starvation
  ------ inclusion threshold ------
        0.1   12.4   0.1       0.21   11.4   0.1    1.5  1  GspL_C    GspL periplasmic domain


Domain annotation for each model (and alignments):
>> RsfS  Ribosomal silencing factor during starvation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.5   0.0   8.5e-16   7.6e-12       5      99 .]     144     300 ..     140     300 .. 0.79

  Alignments for each domain:
  == domain 1  score: 45.5 bits;  conditional E-value: 8.5e-16
                 HHHHHTT-EE.EEEEE-TT....TTBSS-SEEEEEEESSHHHHHHHHHHHHHHHHHC.............C---EEECBT................... CS
        RsfS   5 ealedkkaed.ivvidlre....kkssladymviatakserhlkalaeelekklkee............aaealsveGln................... 67 
                 + ++ + + d + ++dlre     + + + +m++ata+serhl+++a++l ++l++e                      n                   
  KHJ30203.1 144 KHISINLGLDyLSLLDLRElnppPALGANLLMLLATARSERHLHVSADRLCRWLRSEfklrpdadgllgR---------Nelkkrvkrkankakligkh 233
                 556666666514556999988876678889************************9995554444444440.........14555555555667777777 PP

                 .......TS.SEEEE............................E-SSEEEEEEECCCHHHHHHHHHC CS
        RsfS  68 .......egddWvlv............................dlgdvvVhllteeaReeydLEelW 99 
                         ++dW++v                            +  ++vV+llt e+Re + LE+lW
  KHJ30203.1 234 lesiddgIRSDWICVnvgtvndlesltqeekgprsftgfgqrtKGVKIVVQLLTAEKREVIGLEKLW 300
                 8888888888*****************************9964444********************* PP

>> GspL_C  GspL periplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   2.4e-05      0.21      38      61 ..     109     132 ..      78     134 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.4e-05
                 XXXXXXXXXXXXXXXXXXXXXXXX CS
      GspL_C  38 alraqseeiyqqlfPeekrildlr 61 
                 +lr++s+++++q fPe++ri+dl+
  KHJ30203.1 109 YLREESSQTLAQPFPERQRIPDLP 132
                 68********************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       912  (0.0508673); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2363.25
//
Query:       KHJ30204.1  [L=190]
Description: putative 30 kda heat shock protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-20   72.2   1.9    1.4e-14   54.1   0.3    2.2  2  HSP20       Hsp20/alpha crystallin family
    1.4e-06   27.8   0.0    9.7e-06   25.1   0.0    2.1  1  ArsA_HSP20  HSP20-like domain found in ArsA
  ------ inclusion threshold ------
       0.06   13.5   0.8         15    5.8   0.0    3.0  3  FKBP26_C    FKBP26_C-terminal
      0.061   13.7   0.1       0.11   12.8   0.1    1.4  1  DUF3634     Protein of unknown function (DUF3634)


Domain annotation for each model (and alignments):
>> HSP20  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.1   5.4e-07    0.0024       1      46 [.      50      97 ..      50     113 .. 0.80
   2 !   54.1   0.3   3.1e-18   1.4e-14      30     101 ..     121     189 ..     104     190 .] 0.91

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 5.4e-07
                E--SSEEEEEEEEE-TT--CCCEEEEEETTE.EEEEEE--...---TT CS
       HSP20  1 dikeeeeefevkldvpglkkeelkvkvednr.vlvkgehe.eeeedek 46
                dike+++++ +  + pg+++++++++ +d + +++kg+ e + e+d++
  KHJ30204.1 50 DIKENQNAYLLYGEFPGVDQKDIDIEFTDAStLTIKGHVErKYESDNN 97
                799************************99877*****99953333333 PP

  == domain 2  score: 54.1 bits;  conditional E-value: 3.1e-18
                 TEEEEEEE--..---TT----SS---EEEEEE--STTB-TTT-EEEEETTEEEEEEEBSS--..-------- CS
       HSP20  30 nrvlvkgeheeeeedekglikerssrkFsrkftLPenvdadkvkaslkdGvLtvtvpkkepekkkkerkiqi 101
                 ++v vk+++ ++e++ek++i+ers++ F r f+ P  vd+d+vkas+k+G+L++ vpk ++    + rki i
  KHJ30204.1 121 TNVQVKSTNISQEQKEKFWITERSVGGFHRDFAFPVRVDQDNVKASMKNGILSIVVPKLKKT---HGRKITI 189
                 56889999999************************************************998...8899988 PP

>> ArsA_HSP20  HSP20-like domain found in ArsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   2.2e-09   9.7e-06       7      61 ..      61     174 ..      55     176 .. 0.95

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 2.2e-09
  ArsA_HSP20   7 kldLPfvdkeeidlsrs.gdeLtIkig...........................................................nfrRqitLPsvla 45 
                   + P+vd+++id++ + +++LtIk                                                              f+R ++ P +++
  KHJ30204.1  61 YGEFPGVDQKDIDIEFTdASTLTIKGHverkyesdnneaskkqphrvtvedeeeeaaklatnvqvkstnisqeqkekfwitersvgGFHRDFAFPVRVD 159
                 5578**********97669******************************************************************************** PP

  ArsA_HSP20  46 rkevtsAkfedgvLeI 61 
                 +++v +A++++g L I
  KHJ30204.1 160 QDNV-KASMKNGILSI 174
                 ****.*********99 PP

>> FKBP26_C  FKBP26_C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.018        81      12      33 ..      63      85 ..      52     101 .. 0.80
   2 ?    1.5   0.1     0.074   3.3e+02      36      56 ..     115     135 ..      84     142 .. 0.82
   3 ?    5.8   0.0    0.0034        15      15      37 ..     157     179 ..     153     187 .. 0.92

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.018
                H-TT--..--EEEEET.TEEEEE CS
    FKBP26_C 12 yiPnidlekfkieied.ktvtIe 33
                  P +d+++++ie++d +t+tI+
  KHJ30204.1 63 EFPGVDQKDIDIEFTDaSTLTIK 85
                579***********962677775 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.074
                 TTGGGSTTHHHHHHHHHHHHH CS
    FKBP26_C  36 eeakFieniqlaklrIAkdil 56 
                 e ak++ n+q+    I+++  
  KHJ30204.1 115 EAAKLATNVQVKSTNISQEQK 135
                 678899999999999999865 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0034
                 T--..--EEEEETTEEEEE--TT CS
    FKBP26_C  15 nidlekfkieiedktvtIelpee 37 
                 ++d++++k ++++++++I +p+ 
  KHJ30204.1 157 RVDQDNVKASMKNGILSIVVPKL 179
                 699******************86 PP

>> DUF3634  Protein of unknown function (DUF3634)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   2.5e-05      0.11      22      82 ..      72     132 ..      66     144 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.5e-05
     DUF3634  22 levkfkdgklasvkGkiPekfkkdlrdiakaeklsgevrvekerggvrlhvskdvpk.kvqQ 82 
                 + ++f d +  ++kG++  k+++d ++  k+++ + +v  e+ ++ ++l+ + +v + ++ Q
  KHJ30204.1  72 IDIEFTDASTLTIKGHVERKYESDNNEASKKQPHRVTVEDEE-EEAAKLATNVQVKStNISQ 132
                 5799**********************************9988.8889999998886514455 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1427  (0.0795917); expected 358.6 (0.02)
Passed bias filter:                      623  (0.0347482); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 1384.52
//
Query:       KHJ30205.1  [L=421]
Description: putative gpi transamidase component pig-u [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   5.2e-117  391.1  33.1   5.9e-117  390.9  33.1    1.0  1  PIG-U      GPI transamidase subunit PIG-U
  ------ inclusion threshold ------
       0.13   11.9  12.1        0.3   10.8  12.1    1.6  1  8TM_micro  8TM Microsporidial transmembrane domain


Domain annotation for each model (and alignments):
>> PIG-U  GPI transamidase subunit PIG-U
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  390.9  33.1  6.6e-121  5.9e-117       2     382 .]      13     386 ..      12     386 .. 0.97

  Alignments for each domain:
  == domain 1  score: 390.9 bits;  conditional E-value: 6.6e-121
       PIG-U   2 lgvllrllllslassldenlssrvelstpltsfkrlqEgvallksgispYsggvvhqpPLllallslllssintkslqvlasllflliDllialllyki 100
                 +g+++r+ll++l+ +l++ l+ rve+stp+tsfkrlqEg++l+k+++spY+ggv+hq PLll llsll   +  + ++ +++ll++l+Dl++a  l+ i
  KHJ30205.1  13 VGAAVRILLFTLFVGLPDLLTARVEISTPVTSFKRLQEGLYLYKHNVSPYDGGVYHQAPLLLPLLSLL---PDYSIYPAFTNLLYILMDLMSANSLMRI 108
                 6899****************************************************************...899************************* PP

       PIG-U 101 knkslaksekkreksktkks.lsplliaavYlfNPltilscvslStsvlsnlllllslylalkgkallsalslalatylslypllllapllllllkllk 198
                  ++s + +++k  +s++k++ +s+l +aa++l+NP+ti++c+++ +sv++++++l+++  a+ g ++ s+++l++a ylslyp+ll++pl+ll+ +   
  KHJ30205.1 109 -ADSGEAASSKLYTSPRKNKgWSSLAVAAAFLLNPFTIATCIGRPSSVFTTCAILFAISKAVVGASFSSMFALSIAGYLSLYPILLFPPLALLCFD--- 203
                 .89999999998888877777***************************************************************************... PP

       PIG-U 199 askskkpsksnklskllrllllfllyllvLllaSfllggswsflratygniltvsdltPnlGlfWYfFtemFdrFrsfFlfvFqllpflyvlPLtirLr 297
                  ++   ++    ls+l+ ++l+++ +l+v+l +S +++gsw+fl++tyg +l+++dltPn+Gl+WYfF+emFd+Fr+fFl vF++++  yv+ LtirLr
  KHJ30205.1 204 -RRPLYRTAETLLSFLVGNFLAVAGSLYVILQMSSVITGSWEFLSSTYGVQLLLPDLTPNIGLWWYFFIEMFDSFRNFFLGVFWVHLSSYVIGLTIRLR 301
                 .5666788899999************************************************************************************* PP

       PIG-U 298 kqpllllvlllalilifkpyptvgdlalllsLlplfkellkrmkysfiillillvtllLspvfyhlWivkgtGNaNFffaitLvy 382
                 +qpl++l++ll++++ifkpyp+++d +l++++l l+ ++l+ m+y+f++l++ll++++L+p+fy+lWi++g+GNaNFf+aitLv+
  KHJ30205.1 302 RQPLFALTILLGIFTIFKPYPSISDTSLFFAMLSLYMHVLPLMRYTFLALSTLLYATFLGPAFYYLWIYAGSGNANFFYAITLVW 386
                 ************************************************************************************9 PP

>> 8TM_micro  8TM Microsporidial transmembrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8  12.1   3.3e-05       0.3     135     238 ..     260     386 ..     210     401 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 3.3e-05
   8TM_micro 135 aPslnifwflnlqmfeqYselfydifli.vflfLlslvk.........kstklelilvFkd..............styksylllilkkk......dkll 203
                 +P++  +w+++++mf+ ++++f  +f + +  + + l++             l ++++Fk               s y          +        +l
  KHJ30205.1 260 TPNIGLWWYFFIEMFDSFRNFFLGVFWVhLSSYVIGLTIrlrrqplfaLTILLGIFTIFKPypsisdtslffamlSLYM---------HvlplmrYTFL 349
                 69********************999976245688888888877776644555668888998887765533332222222.........23333334444 PP

   8TM_micro 204 nllvll..aiiesyvsyllrltgvvNlNFlnWsnlvf 238
                  l+ ll   ++    +yl ++ g++N NF + ++lv 
  KHJ30205.1 350 ALSTLLyaTFLGPAFYYLWIYAGSGNANFFYAITLVW 386
                 4444431156667789999***********9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3002.55
//
Query:       KHJ30206.1  [L=494]
Description: putative translation regulator gcd7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.6e-59  199.0   3.9    2.2e-34  118.9   0.2    3.0  3  IF-2B     Initiation factor 2 subunit family


Domain annotation for each model (and alignments):
>> IF-2B  Initiation factor 2 subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0   3.2e-12   5.7e-08       1      71 [.      39     108 ..      39     152 .. 0.83
   2 !   48.0   0.1   5.4e-17   9.7e-13      65     145 ..     231     310 ..     208     325 .. 0.88
   3 !  118.9   0.2   1.2e-38   2.2e-34     148     282 .]     335     467 ..     331     467 .. 0.97

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 3.2e-12
                 SS-SHHHHHHHHHHHHHHHHHHCCCSTHHHHHHHHHHHHHHHHTSSTS-HHHHHHHHHHHHHHHCCTTTSS CS
       IF-2B   1 kvrGspaiaiaalevllevikdaktskvaeLkeelrkaidlLkkarPtavslgnairrllkeiselksssd 71 
                 +++Gs + aia++++ll  + + k+++v +L e + + +++L++a+P +v lgn +rr+ + i+  + +++
  KHJ30206.1  39 QIHGSRPCAIATAHLLLHTVIKFKWTDVGKLLELIAEVGQRLIEAQPREVVLGNIVRRVRHMIK-GEAEEN 108
                 789*********************************************************9443.222222 PP

  == domain 2  score: 48.0 bits;  conditional E-value: 5.4e-17
                 CCTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEEEXTTTT CS
       IF-2B  65 elksssdvkeakksliekikelikeieeadekigdiaaelikdgdtilTicnsktvlevlraaakekkkfkVivvEsrPrl 145
                 +   ++++k++k++++  i+e+i+e  +   +i+ +a e+i+++++ilT++ s+ v ++l +aa+ k+kf+Vi +Es P+ 
  KHJ30206.1 231 ARRIDKTTKDIKAEILTGIREIIDELIQEYDLIAGYALEHIHSNEIILTHSFSQCVHKFLLKAAE-KRKFTVIIAESYPNR 310
                 445678999*****************************************************887.79***********75 PP

  == domain 3  score: 118.9 bits;  conditional E-value: 1.2e-38
                 HTHHHHHHHTTXEEEEEEGGGHHHHHHCTESEEEEEXSEEETTSEEEEETTHHHHHHHHHHTTXEEEEEXXGGGBESTSSSGGGSSXXBEXTHHHHEET CS
       IF-2B 148 rltakeLvqagipvtlitdsavayvmseevdkvivGAdrilenGaiankiGTsslAvlAkefnipvlvvaeslkfservqldedifieerdpeellnit 246
                 + +++ L+ ag+ v li d++v+++ms+ v+kvi  ++++++nG++++ +G + +A +Ak +++pv+vv + +k+s++++ + +++ie +dp ++++++
  KHJ30206.1 335 KSFLEPLSAAGVTVILISDASVFAIMSR-VNKVIFATHAVIANGGLIADAGARIIAKAAKVHRTPVIVVSGVYKLSPEYPYEVESLIEYGDPGKVVPFD 432
                 667899**********************.********************************************************************** PP

                 TEESSTTTEEEEEBSEEEEEGGGXSEEEETTEEEXC CS
       IF-2B 247 geriaeeelkvvnpafDvtPpelItliITevGvlpp 282
                 +   +e +l++ np++D++Pp+l++l+IT++G+ +p
  KHJ30206.1 433 NGVLVE-NLEIDNPVYDYVPPDLVDLYITNLGAHAP 467
                 ***999.*************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3681.51
//
Query:       KHJ30207.1  [L=76]
Description: hypothetical protein EV44_g0246 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.049   14.1   0.1       0.06   13.8   0.1    1.1  1  Egh16-like  Egh16-like virulence factor


Domain annotation for each model (and alignments):
>> Egh16-like  Egh16-like virulence factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   3.3e-06      0.06       3      63 ..      19      72 ..      17      75 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 3.3e-06
  Egh16-like  3 HgvitkvtGangvngpglgvadgtprdgtsrasgsqaDttvfrdkeikkkkasglGrtlgs 63
                Hg+++k++G++g+n p++ ++ +    ++  + ++q D       + ++ + + +G+t g 
  KHJ30207.1 19 HGAVIKAVGDEGGNLPAFRIDASSCGGSQ--RDPIQTDKK-----HSRSVNVDICGKTSGD 72
                *********************44332222..233455544.....3355567889998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       251  (0.0139997); expected 358.6 (0.02)
Passed bias filter:                      231  (0.0128842); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 573.41
//
Query:       KHJ30208.1  [L=742]
Description: putative fibrous sheath cabyr-binding [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (742 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1062  (0.0592336); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 5064.95
//
Query:       KHJ30209.1  [L=262]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.8e-05   23.6   1.3    3.8e-05   23.6   1.3    2.4  2  zf-CCHC       Zinc knuckle
  ------ inclusion threshold ------
        3.8    7.9   7.5         22    5.5   7.6    2.2  3  Defensin_big  Big defensin


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   1.3   4.2e-09   3.8e-05       2      17 ..      86     101 ..      86     102 .. 0.95
   2 ?   -1.2   0.4      0.28   2.5e+03       3       6 ..     126     129 ..     125     131 .. 0.82

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 4.2e-09
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +C+nC++ GHia+ C+
  KHJ30209.1  86 QCFNCQKYGHIAKICT 101
                 6**************8 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.28
                 TSSS CS
     zf-CCHC   3 CynC 6  
                 C nC
  KHJ30209.1 126 CSNC 129
                 99*9 PP

>> Defensin_big  Big defensin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       0.5   4.5e+03       2      14 ..      43      55 ..      43      59 .. 0.85
   2 ?    5.5   7.6    0.0024        22      32      55 ..     111     134 ..      80     136 .. 0.78
   3 ?   -3.4   0.0       1.4   1.3e+04      32      42 ..     237     247 ..     223     249 .. 0.59

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.5
  Defensin_big  2 kvaaslylllval 14
                  k ++sl++++ ++
    KHJ30209.1 43 KTSGSLIVWFDGA 55
                  5689*****9875 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0024
  Defensin_big  32 SdkdaraCgknrgfCrpkCkkeYc 55 
                      d+r+C kn +   + C+++Y+
    KHJ30209.1 111 GGHDTRTCSKNQETSCSNCSRKYT 134
                   445*********9755*******9 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 1.4
  Defensin_big  32 SdkdaraCgkn 42 
                     +d+r+ +++
    KHJ30209.1 237 THSDTRTVTRD 247
                   35677777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       831  (0.0463495); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1887.71
//
Query:       KHJ30210.1  [L=445]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00048   20.2   1.7    0.00048   20.2   1.7    1.8  2  ArfGap          Putative GTPase activating protein for Arf
     0.0092   15.6   2.4      0.018   14.7   2.4    1.5  1  DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
  ------ inclusion threshold ------
       0.98    9.4   4.7        2.2    8.3   4.7    1.6  1  OrfB_Zn_ribbon  Putative transposase DNA-binding domain
        4.5    7.2   6.5        2.7    7.9   1.5    2.5  2  zf-CCHC_6       Zinc knuckle


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.67     3e+03      61      91 ..     158     188 ..     141     211 .. 0.69
   2 !   20.2   1.7   1.1e-07   0.00048      15      92 ..     332     407 ..     318     424 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.67
                 --HHHHHHHHHTCHHHHHHHHTTTC-TTTSG CS
      ArfGap  61 wedeelellkalgNkkaneileaklpkeekr 91 
                 + ++  +++ ++g kk +  l +kl++ + +
  KHJ30210.1 158 IGEKTWATMVRIGQKKSRIALSNKLQAAPVS 188
                 5667778899999999999999998777666 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 1.1e-07
                 B-TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG- CS
      ArfGap  15 vCaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekrs 92 
                  C +Cg+++ t   l ++ + C +C g Hrs  +h    rs++  + ++e++++++++g+++ +++l ak  +e+   
  KHJ30210.1 332 SCGNCGSNNHT-DDLRMASIKCRNCGGPHRSD-NHRCLARSTRSGTPTKEQMKTFRQVGEREYQAVLRAKAAEESAAA 407
                 69999988876.578999999**********8.9***********************************998777663 PP

>> DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   2.4   4.1e-06     0.018       3      24 ..     333     356 ..     332     361 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 4.1e-06
                     -SSS--B--..--SSS----SSS- CS
  DNA_RNApol_7kD   3 CgeCgaevs..lkkgdpiRCkeCG 24 
                     Cg+Cg+++   + + ++i+C++CG
      KHJ30210.1 333 CGNCGSNNHtdDLRMASIKCRNCG 356
                     ******998667799********9 PP

>> OrfB_Zn_ribbon  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   4.7   0.00048       2.2      30      61 ..     332     364 ..     330     368 .. 0.89

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00048
  OrfB_Zn_ribbon  30 tCseCgsknke.alsgrtfkCpnCgfeadrDvn 61 
                     +C +Cgs+n + +l     kC+nCg  +  D +
      KHJ30210.1 332 SCGNCGSNNHTdDLRMASIKCRNCGGPHRSDNH 364
                     6**********9*************99888865 PP

>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.3     0.084   3.8e+02       4      12 ..     333     341 ..     332     345 .. 0.81
   2 ?    7.9   1.5   0.00061       2.7       2      19 ..     350     366 ..     349     384 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.084
   zf-CCHC_6   4 CknCGAFGH 12 
                 C+nCG   H
  KHJ30210.1 333 CGNCGSNNH 341
                 *****7666 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00061
   zf-CCHC_6   2 vKCknCGAFGHtarSkrC 19 
                 +KC+nCG   H+  + rC
  KHJ30210.1 350 IKCRNCGG-PHRSDNHRC 366
                 7******8.599999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       622  (0.0346924); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 3206.42
//
Query:       KHJ30211.1  [L=342]
Description: hypothetical protein EV44_g0249 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.03   14.1   0.7        2.7    7.9   0.2    2.4  2  Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like


Domain annotation for each model (and alignments):
>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0    0.0023        41      42      55 ..      35      48 ..      22      53 .. 0.83
   2 ?    7.9   0.2   0.00015       2.7      19      54 ..     290     325 ..     282     330 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0023
                -EEEETTEE--TTS CS
   Rad60-SLD 42 vrLiFDGeeLdpns 55
                 +L+FDG+e++ ++
  KHJ30211.1 35 CKLTFDGQEMKLTQ 48
                69********9876 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00015
                 TTSBHHHHHHHHHHHHT----TT-EEEETTEE--TT CS
   Rad60-SLD  19 ptttvskLieayrkkkgipeeqkvrLiFDGeeLdpn 54 
                 ++  v++Li+  +++ +i +e ++ L+++ e L+  
  KHJ30211.1 290 RNRMVEELIKIQQEQDHIAQEHQIALYYQTEALKHA 325
                 77889************************9999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       913  (0.0509231); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2451.43
//
Query:       KHJ30212.1  [L=1221]
Description: putative ras gtpase activating protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-13   50.9   0.0    4.3e-13   49.4   0.0    1.9  1  CH        Calponin homology (CH) domain
      1e-07   31.9   0.5      1e-07   31.9   0.5    2.0  2  RasGAP    GTPase-activator protein for Ras-like GTPase
    4.2e-06   27.0   0.4    0.00033   20.8   0.0    3.1  3  RasGAP_C  RasGAP C-terminus
     0.0053   16.5   4.9     0.0082   15.9   0.6    2.7  2  DivIC     Septum formation initiator
  ------ inclusion threshold ------
      0.083   13.1   0.0       0.21   11.9   0.0    1.7  1  CDC24     CDC24 Calponin
       0.11   12.7   0.0       0.76    9.9   0.0    2.5  2  CH_2      CH-like domain in sperm protein
          1    8.3   4.5          5    6.0   4.1    2.3  2  MukE      MukE-like family


Domain annotation for each model (and alignments):
>> CH  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4   0.0   1.7e-16   4.3e-13       5     107 ..     268     370 ..     264     372 .. 0.88

  Alignments for each domain:
  == domain 1  score: 49.4 bits;  conditional E-value: 1.7e-16
                 HHHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT.HHHHHHHHHHHHHHHHHHTTCHTTSS.-HHHHHTTSHH.HHHHHH CS
          CH   5 kellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnks.efkkleNinlaldvaekklgvpkvli.eaedlvegknk.svltll 100
                  e+ +Wi+++l++ +p   + ++ee+lrDGv L++++ +l+p++      +++ ++++ +Ni++++ +++ ++ +p++l  e +d++e+kn  +v++++
  KHJ30212.1 268 SEAKEWIERVLQRPIP--PIVQLEEALRDGVTLAEIVAALQPEKTIRIFRHPKlQYRHSDNIATFFRFLA-DVELPDLLRfELTDVYEKKNIpKVIHCI 363
                 57899******98655..568*********************984444444448****************.**************************** PP

                 HHHHHHH CS
          CH 101 aqLfraf 107
                 ++L+++ 
  KHJ30212.1 364 HTLSWHL 370
                 ***9986 PP

>> RasGAP  GTPase-activator protein for Ras-like GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       1.8   4.7e+03      32     107 ..     182     252 ..     154     280 .. 0.57
   2 !   31.9   0.5     4e-11     1e-07     108     205 ..     965    1062 ..     717    1064 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.8
      RasGAP  32 eytkrpegqeyLkkilkpllqkilekedlnlelDPrkiyeelkkkkesktgkksessgkksekeaselekvsqmle 107
                 ++ k+    ++L+  l ++ ++i+  ed n ++  +k++      ++ + +++ + ++   ++ ++ + k+++ ++
  KHJ30212.1 182 SFQKS--STSQLR-TLSKFTKDIT-SEDFNTVSPTQKVAGL-YGRRKLQRSSTAKGNSTLASNRRLYEWKTRNWMD 252
                 44444..333333.3446666665.6666644444444433.4445555555555555555555555556666555 PP

  == domain 2  score: 31.9 bits;  conditional E-value: 4e-11
      RasGAP  108 knldkLkelvneildsIfksleqlPvgiRiickqirekvkekfpdaseeeilnligsflflrfliPaivnPklfglvdkqiseeqrrnLtliaKllq 204 
                    ++ ++ lv   l s  + ++++P+giR++c+ i   + ++f ++ ++ + + +g+  +  +l Pa ++P+  g++++q++   +rnL++iaK+l 
  KHJ30212.1  965 IDCKRIETLVADSLLSPESLVNKMPYGIRFVCQDIFPALFQRFSSEPQQLLPQTVGNRPWKFYLQPARLAPEIIGIFKRQMTLLLKRNLGEIAKVLN 1061
                  556666666666666667789**********************999888889*******************************************97 PP

      RasGAP  205 n 205 
                  +
  KHJ30212.1 1062 Q 1062
                  5 PP

>> RasGAP_C  RasGAP C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.6     0.078     2e+02      38      76 ..     537     575 ..     535     580 .. 0.87
   2 ?   -2.8   0.1       2.5   6.5e+03      62      78 ..     922     938 ..     919     953 .. 0.78
   3 !   20.8   0.0   1.3e-07   0.00033      74     137 .]    1077    1140 ..    1073    1140 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.078
    RasGAP_C  38 irnkgrlrekrkeElesleetlktLseknnylesqlesY 76 
                 ir++  + +++++ +++++  l tL++++++l+ q++++
  KHJ30212.1 537 IRQNLIRAKSVRSKIDRVQRQLVTLKDNTSQLQAQIRDM 575
                 56666678899999*********************9876 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.5
    RasGAP_C  62 LseknnylesqlesYka 78 
                 L+ +n+  +++lesY++
  KHJ30212.1 922 LKARNKSSRKKLESYQQ 938
                 67778888888888876 PP

  == domain 3  score: 20.8 bits;  conditional E-value: 1.3e-07
    RasGAP_C   74 esYkayienvleqlkkkkgklpfskqyfkkrelkksgklpkfgsykysakqLeekgVLleiegl 137 
                  + ++ay+e ++e  +    ++    ++    el++sg + kfgs+kysa    +kgVL++++g+
  KHJ30212.1 1077 HPLNAYVEDAIERTTVVFANIISDADADAGGELERSGCKAKFGSFKYSAPPFFDKGVLVSWKGY 1140
                  557788888888877664446667788889999****************************985 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.6   3.2e-06    0.0082      11      52 ..     536     577 ..     535     583 .. 0.91
   2 ?    1.2   0.3      0.12   3.1e+02      23      62 ..     857     896 ..     850     901 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 3.2e-06
                 XXXXXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XX CS
       DivIC  11 fgkkgllaykqlkqeiaalqaelaklkaeneeLeaevkdLks 52 
                 ++ ++l + k+++++i++ q++l++lk+   +L+a+++d++s
  KHJ30212.1 536 IIRQNLIRAKSVRSKIDRVQRQLVTLKDNTSQLQAQIRDMTS 577
                 6778999********************************964 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.12
                 HHHHHHHHHHHHHHHHHHHHHHHHHCC-XXXXXXXXXXXX CS
       DivIC  23 kqeiaalqaelaklkaeneeLeaevkdLksdedyieerAR 62 
                  + ++++ ++++   + +++L+ ++++L  ++  ++e+ R
  KHJ30212.1 857 GKTVVRQVRQNEMAEQYIDQLDIRIALLVTNKITLDEVVR 896
                 56788999*******************9888888888777 PP

>> CDC24  CDC24 Calponin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   8.1e-05      0.21       2      87 ..     284     365 ..     283     367 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 8.1e-05
       CDC24   2 PvtqlwkllrqGspLlalfNalkpeeklevdevksddlkvcKksvydFllackkeLgfedeelftisdlfsedttdlvkvlkvvnk 87 
                 P+ ql + lr G  L  +  al+pe+++++ ++ + + + +   +  F    +++++++d   f ++d++++  +++ kv++ +++
  KHJ30212.1 284 PIVQLEEALRDGVTLAEIVAALQPEKTIRIFRHPKLQYRHSD-NIATFF-RFLADVELPDLLRFELTDVYEK--KNIPKVIHCIHT 365
                 999***************************665555555543.344444.3456889999999999999976..567777777765 PP

>> CH_2  CH-like domain in sperm protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0    0.0003      0.76      13      69 ..     284     339 ..     271     366 .. 0.77
   2 ?   -3.4   0.0       4.3   1.1e+04      48      66 ..     927     945 ..     923     965 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0003
        CH_2  13 svknlkrdfsdGvlvAeilkkyypklvdlhnysngsslaaklnNWetLekvlkklgi 69 
                 ++ +l++ + dGv +Aei++ ++p+   +  +++ +   +  +N  t+ ++l  +++
  KHJ30212.1 284 PIVQLEEALRDGVTLAEIVAALQPE-KTIRIFRHPKLQYRHSDNIATFFRFLADVEL 339
                 34478999*****************.99999*9999999999999999999976655 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 4.3
        CH_2  48 sslaaklnNWetLekvlkk 66 
                 +s ++kl+ +++L  +l+ 
  KHJ30212.1 927 KSSRKKLESYQQLFFTLQT 945
                 6778888888888766654 PP

>> MukE  MukE-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   4.1     0.002         5     141     208 ..     507     573 ..     490     593 .. 0.81
   2 ?   -1.1   0.0      0.29   7.6e+02      93     134 ..    1026    1066 ..    1018    1089 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.002
        MukE 141 klqekvrtslrrlrrlGmvtaleedsekfrisesvfrfgadvrsgddpreaqlrlirdGeavtadeel 208
                  lq   r+ l+r rr G + + +ed+ek  i + + r +  vrs+ d  + ql  ++d  ++ + +  
  KHJ30212.1 507 SLQSIARGFLTRQRRAGQISFRKEDEEKIIIRQNLIR-AKSVRSKIDRVQRQLVTLKDNTSQLQAQIR 573
                 577778999***************************9.578************999998887755543 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.29
        MukE   93 lylsperlane..GifsaqelydellsladekkllklvnqrstG 134 
                  +yl p rla e  Gif  q     ll   +  ++ k++nq+s G
  KHJ30212.1 1026 FYLQPARLAPEiiGIFKRQMT---LLLKRNLGEIAKVLNQKSFG 1066
                  69*******986688877653...33334444555666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       859  (0.0479112); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.83u 0.27s 00:00:01.10 Elapsed: 00:00:00.43
# Mc/sec: 8490.30
//
Query:       KHJ30213.1  [L=320]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       880  (0.0490825); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.21s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2446.91
//
Query:       KHJ30214.1  [L=212]
Description: hypothetical protein EV44_g3953 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.037   14.0   0.2      0.069   13.1   0.2    1.4  1  DUF4920        Domain of unknown function (DUF4920)
       0.05   13.1   1.4      0.065   12.7   1.4    1.1  1  Nab6_mRNP_bdg  RNA-recognition motif
      0.096   12.4   0.7       0.14   11.8   0.7    1.2  1  TMEM174        Transmembrane protein 174


Domain annotation for each model (and alignments):
>> DUF4920  Domain of unknown function (DUF4920)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   1.1e-05     0.069       6      45 ..      63     103 ..      58     110 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.1e-05
     DUF4920   6 kekdtlkvkvkgkveevcqkkGcWlkldledge.evrVkfK 45 
                 ++k++ k+k+  k   vc+k GcW + + ++++ + +  fK
  KHJ30214.1  63 NNKEQSKTKFGKKACFVCSKEGCWSTRHSPEERmKSMADFK 103
                 67889999****************99887776546777777 PP

>> Nab6_mRNP_bdg  RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.4   1.1e-05     0.065     212     313 ..      23     122 ..      12     126 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.1e-05
  Nab6_mRNP_bdg 212 kklkiskcffvsvaklaesssasslksisskgtkstssevsaeskengeytsknaslvslessvsldeeidslaekLksveleestlevdvsdYke 307
                    k +k +k  + + +  ++ s  + ++ +++k ++++ss++++++++++++ +k   + s e   s+ +  ++  +++++   +++tl+++ ++Y  
     KHJ30214.1  23 KVQKSQKTAYYTADGYENDSFYTDRQYHEQKRSQTSSSSANNKEQSKTKFGKKACFVCSKEGCWSTRHSPEERMKSMAD--FKSKTLRLTDRKYTG 116
                    5567788999999999999998888888887777777777777777778999999999999998877777774455555..899************ PP

  Nab6_mRNP_bdg 308 Peieef 313
                    Pei++f
     KHJ30214.1 117 PEIRQF 122
                    ***997 PP

>> TMEM174  Transmembrane protein 174
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.7   2.4e-05      0.14     158     213 ..      17      70 ..       3      82 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.4e-05
     TMEM174 158 lkssaaavtasgppqyytiypldnaafvedeessaalavdsenerssesaeeleek 213
                   s + +v+ s    yyt+   +n +f +d +++++ +   ++++ss +++e++++
  KHJ30214.1  17 SISLSLKVQKSQKTAYYTADGYENDSFYTDRQYHEQKRS--QTSSSSANNKEQSKT 70 
                 456667888899999*****************9996663..333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1563  (0.0871772); expected 358.6 (0.02)
Passed bias filter:                      629  (0.0350828); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1481.84
//
Query:       KHJ30215.1  [L=221]
Description: hypothetical protein EV44_g0113 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.15   11.5   0.0       0.22   10.9   0.0    1.3  1  SBP_bac_3  Bacterial extracellular solute-binding proteins, f


Domain annotation for each model (and alignments):
>> SBP_bac_3  Bacterial extracellular solute-binding proteins, family 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   1.2e-05      0.22      65     126 ..      85     146 ..      72     174 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 1.2e-05
                 SEB--HHHHTTEEEESESEEEEEEEEEEE.TTSHGTCCHSSCGCGTTSEEEEETTSHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   SBP_bac_3  65 aititpeReekvdFsqpyfsagqvllvrk.kdaskissiksladLkgkkvgvqagstaeellk 126
                  ++it++R +++    p+ ++gqv+l++    +sk+  ++++ d    +++++++    ++++
  KHJ30215.1  85 ETAITAQRDAEFKNLPPMGYNGQVVLYPIlR-SSKVYRFENIRDAGHDRIVTTKDCRLLSIVT 146
                 578**************************55.68999999999*98899*9999876665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.21s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1743.12
//
Query:       KHJ30216.1  [L=198]
Description: hypothetical protein EV44_g0511 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1550.19
//
Query:       KHJ30217.1  [L=215]
Description: hypothetical protein EV44_g3644 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00092   19.0   0.1     0.0023   17.7   0.1    1.7  1  gag_pre-integrs  GAG-pre-integrase domain


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.1   1.3e-07    0.0023      20      45 ..     185     210 ..     165     214 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.3e-07
  gag_pre-integrs  20 nkssinlWHrRLGHpsfsrlkkLfkk 45 
                      n+++++  HrR+GHps +rl  L k+
       KHJ30217.1 185 NDQELRQLHRRFGHPSARRLGCLLKR 210
                      789999**************988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       349  (0.0194657); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1579.33
//
Query:       KHJ30218.1  [L=362]
Description: putative sporulation-specific chitinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-68  231.4   0.1    2.3e-68  231.2   0.1    1.0  1  Glyco_hydro_18  Glycosyl hydrolases family 18
  ------ inclusion threshold ------
      0.046   13.6   0.1       0.11   12.5   0.1    1.6  1  GRAB            GRIP-related Arf-binding domain


Domain annotation for each model (and alignments):
>> Glyco_hydro_18  Glycosyl hydrolases family 18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.2   0.1   2.6e-72   2.3e-68       3     312 .]      26     342 ..      24     342 .. 0.94

  Alignments for each domain:
  == domain 1  score: 231.2 bits;  conditional E-value: 2.6e-72
                     EEEEEGGGGGSS.G..CSHTTTESEEEEEEEEEEETTTEEEESS.TTHH........HHHHHHHHHHHHTSTT-EEEEEEEETTTTTHHHHHHTS CS
                     xxxxxxxxxxxx.x..xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18   3 vgYysswesygn.n..ylpsaklthiiyaFakidgengkvvvsd.wedl........gnfeqlkklkkkknpgvkvllsiGGwtdssgfslaast 85 
                     ++Yy +w++ +  +  +l+ + ++ + yaFa++++ +g+v++sd   dl        g+++ l++lk k++  +kv+lsiGG+++s++fs++as+
      KHJ30218.1  26 AIYYPNWRARDGqTpaTLNFNCINFVYYAFANVNP-DGTVTLSDeDVDLrmsvdgtsGCINSLMRLK-KQYYYLKVILSIGGANGSQNFSSVASN 118
                     78******996533444779999************.********88888******************.9999*********************** PP

                     HHHHHHHHHHHHHHHHHCT-SEEEEEES-TTTSTCHHHHHHHHHHHHHHHHHHHHHHTSTTCEEEEEEESSHHHHHHHCHHHHHHHHTSEEEEET CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18  86 dasrkkfadsvvsllrkygfDGiDidweypggnpedkenytallkelrealdkakategkkllLsaavpasasdlskgydlpkiakylDyvnvmt 180
                     +a r++fa+++  l++ +gfDGiDidwe p++ p++++n+ all+++r++l         +++++aa+pa+++ l+++ d+ k ++ylD +n+m+
      KHJ30218.1 119 AAYRDNFARTARGLVEGLGFDGIDIDWESPKD-PQEGNNFIALLAAIRTQLPP------FRYYVTAALPAGEWALQNI-DIYKSQSYLDLINLMA 205
                     *****************************966.9***************9994......37*************9999.999************* PP

                     TTSSSTTSSBE--SS-SSB...TCSSHHHHHHHHHHTT--GGGEEEEEESEEEEEEESSSSSS.....TSTTTEEEHHHHHHHHTEEEEEEEEET CS
                     xxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18 181 YDfhgswdnvtghhaplyd...aslnvdeavkeylkagvpakklvlGvpfygrawalvsgadn.....tkeegvlsykelkellkkakakrkyds 267
                     YDf+gsw ++ g++++l++   ++ + d+av+++l++g p +k+ lG+p ygr++ ++ g+++       ++g ++y+ l++    ++a +++d 
      KHJ30218.1 206 YDFNGSWTTRSGYQSQLFSskpDENSGDKAVHYLLSKGFPVSKILLGIPVYGRSFLGAAGPGQtytglGGNDGAFAYNSLPR----PNASENVDR 296
                     *******************7644********************************99999777888898999******9988....79999**** PP

                     TTTEEEEEETT.EEEEE-SHHHHHHHHHHHHHTTESEEEEETGGGS CS
                     xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18 268 kakapyvydge.efvsyDdpksikakadyvkakglgGvmiWsldqD 312
                     + ++ y++ g+  f+syD+p+++k ka+y  a gl+G++ W++ qD
      KHJ30218.1 297 RLVSAYCVGGDgGFISYDNPDTVKLKANYCNAFGLAGLFYWEATQD 342
                     *********99********************************998 PP

>> GRAB  GRIP-related Arf-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   1.2e-05      0.11       1      12 [.     289     300 ..     289     300 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.2e-05
        GRAB   1 sseenVDKrLIS 12 
                 + +enVD+rL+S
  KHJ30218.1 289 NASENVDRRLVS 300
                 679********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       325  (0.0181271); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2598.09
//
Query:       KHJ30219.1  [L=215]
Description: putative 40s ribosomal protein s5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.5e-36  123.7   2.5    5.6e-36  123.4   2.5    1.1  1  Ribosomal_S7  Ribosomal protein S7p/S5e


Domain annotation for each model (and alignments):
>> Ribosomal_S7  Ribosomal protein S7p/S5e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.4   2.5   3.1e-40   5.6e-36      16     149 .]      73     215 .]      62     215 .] 0.95

  Alignments for each domain:
  == domain 1  score: 123.4 bits;  conditional E-value: 3.1e-40
                   SSTTSBHHHHHHHHHSB....TTBHHHHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHCS-SEEEEEEBSSSSBEEEEEEE-HHHHHHHHHHHHHHHH CS
  Ribosomal_S7  16 pkynselveklinklmk....dGkkslAekivygaldiieektkkdplevleeAlenvkPrvevksrrvGGatyqvpvevrpkRrqalAlrwiieaa 108
                    k++++++e+l+n lm+    +Gkk +A +iv +a++ii+  ++++p++v ++A+ n+ Pr++ +++   G+  +++v+v+p Rr+++A+  ++ +a
    KHJ30219.1  73 RKAQCPIIERLTNSLMMngrnNGKKLMAVRIVAHAFEIIHIMSDQNPIQVAVDAIVNCGPREDSTRIGSAGTVRRQAVDVSPLRRVNQAIALLTIGA 169
                   45999************99999************************************************************************999 PP

                   ...STSSSS-HHHHHHHHHHHHHTT-..SHHHHHHHHHHHHHHHTG CS
  Ribosomal_S7 109 ...rkrkeksmaekLaeElidAaege..gaavkkreethrmAeanr 149
                      ++r+ ks+ae+LaeEli+Aa+g+  ++a+kk++e++r+A++nr
    KHJ30219.1 170 reaAFRNVKSVAECLAEELINAAKGSsnSYAIKKKDELERVAKSNR 215
                   88899********************9899****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1659.43
//
Query:       KHJ30220.1  [L=97]
Description: putative 40s ribosomal protein s25 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.8e-37  127.0   6.1      3e-37  126.8   6.1    1.0  1  Ribosomal_S25  S25 ribosomal protein
     0.0062   16.0   0.6     0.0097   15.3   0.2    1.4  1  RNA_pol_Rpc34  RNA polymerase Rpc34 subunit
  ------ inclusion threshold ------
      0.011   16.1   0.1      0.015   15.7   0.1    1.2  1  Rrf2           Transcriptional regulator
      0.017   14.9   0.1      0.023   14.4   0.1    1.2  1  HTH_DeoR       DeoR-like helix-turn-helix domain
      0.021   14.4   0.1      0.034   13.7   0.1    1.3  1  HTH_24         Winged helix-turn-helix DNA-binding
      0.046   13.6   0.1      0.062   13.2   0.1    1.2  1  TrmB           Sugar-specific transcriptional regulator TrmB
       0.13   12.1   0.0       0.17   11.8   0.0    1.3  1  MarR_2         MarR family


Domain annotation for each model (and alignments):
>> Ribosomal_S25  S25 ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.8   6.1   1.2e-40     3e-37      13     101 .]       4      92 ..       1      92 [. 0.96

  Alignments for each domain:
  == domain 1  score: 126.8 bits;  conditional E-value: 1.2e-40
  Ribosomal_S25  13 akaggkakkKKwskgkvkdklnnavlfdketydkllkevpkyklitpsvvserlkingslArraLreleekgliklvskhraqviYtra 101
                    a+ g+k++kKKwskgkvkdk+++av++dk+t dkl+k+v++y+l+t++++++rlkingslAr++L++le+kg+ik+++ h++ +iYtra
     KHJ30220.1   4 ANTGAKKQKKKWSKGKVKDKAQHAVILDKATSDKLYKDVQSYRLVTVATLVDRLKINGSLARKCLKDLEQKGQIKKIVGHSKLQIYTRA 92 
                    55788999*******************************************************************************95 PP

>> RNA_pol_Rpc34  RNA polymerase Rpc34 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.2   3.8e-06    0.0097     105     146 ..      50      89 ..      46      93 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.8e-06
                    HHHHHHTTGXXHHHHHHHHHHHHHTTXXEEEEXSSSSSXEEE CS
  RNA_pol_Rpc34 105 srtiksklnLhksvvkkcLksLeskkyiksvksvkaptkkiY 146
                     +t+  +l+++ s+ +kcLk Le+k+ ik++  v +++ +iY
     KHJ30220.1  50 VATLVDRLKINGSLARKCLKDLEQKGQIKKI--VGHSKLQIY 89 
                    689999***********************64..777777777 PP

>> Rrf2  Transcriptional regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.7   0.1   5.7e-06     0.015      23      61 ..      45      83 ..      37      92 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 5.7e-06
                CC-B-HHHHHHHHTS-HHHHHHHHHHHHHTTSEEEETTT CS
        Rrf2 23 eepvsseeiaerqnispsylekilakLrkaglvksvrGk 61
                 + v+++++ +r +i+ s ++k l+ L+++g +k + G+
  KHJ30220.1 45 YRLVTVATLVDRLKINGSLARKCLKDLEQKGQIKKIVGH 83
                4569******************************99887 PP

>> HTH_DeoR  DeoR-like helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   9.1e-06     0.023       4      49 ..      37      82 ..      35      87 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 9.1e-06
    HTH_DeoR  4 qilellkqqgklsveelvellgvSeaTiRRDLneLeeqglltRthG 49
                ++ + +++ + ++v  lv++l++    +R+ L+ Le++g ++++ G
  KHJ30220.1 37 KLYKDVQSYRLVTVATLVDRLKINGSLARKCLKDLEQKGQIKKIVG 82
                67777899999********************************987 PP

>> HTH_24  Winged helix-turn-helix DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   1.3e-05     0.034      20      48 .]      50      78 ..      46      78 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.3e-05
      HTH_24 20 qreLAerlglSpstvnrrlkrLeeeGlIk 48
                 + L +rl +  s  +++lk Le++G Ik
  KHJ30220.1 50 VATLVDRLKINGSLARKCLKDLEQKGQIK 78
                566889**********************7 PP

>> TrmB  Sugar-specific transcriptional regulator TrmB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   2.4e-05     0.062      13      58 ..      38      83 ..      33      95 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.4e-05
                HCHHHHHHCCCHHCHHCCCTTSSCHCHHHHHHHHHHCTSEEEESST CS
        TrmB 13 vYlaLlklgpatadeiaeelgvprskvYevLrsLedkGlVerekgr 58
                 Y+ + ++   t+ ++  +l++  s + + L+ Le+kG ++++ g 
  KHJ30220.1 38 LYKDVQSYRLVTVATLVDRLKINGSLARKCLKDLEQKGQIKKIVGH 83
                67777788889******************************99877 PP

>> MarR_2  MarR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   6.8e-05      0.17      22      52 ..      48      78 ..      26      85 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6.8e-05
                EEHHHHHHHHTSSHHHHHHHHHHHHHTTSEE CS
      MarR_2 22 ltvgelarrlglsksavsrilkrLvaaGLve 52
                +tv+ l++rl++  s + + lk+L+++G + 
  KHJ30220.1 48 VTVATLVDRLKINGSLARKCLKDLEQKGQIK 78
                4**************************9775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       910  (0.0507558); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 705.68
//
Query:       KHJ30221.1  [L=232]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.033   13.6   0.1      0.038   13.4   0.1    1.2  1  SelP_N          Selenoprotein P, N terminal region


Domain annotation for each model (and alignments):
>> SelP_N  Selenoprotein P, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   2.1e-06     0.038     108     170 ..      76     138 ..      23     209 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.1e-06
      SelP_N 108 nkDDFliYDRCGr.LvyhlgLPysfltfpyveeaikatyceekCGnCslesseaeeeckevtka 170
                  +  F ++D  G   +++ +LP  f+      + i++    + CGnC  ++  a+++ck  tk 
  KHJ30221.1  76 PRCGFRVFDESGItKIFKKKLPIEFFIRCNGHHNIRNCSRASSCGNCGSTM-RAQDMCKALTKC 138
                 456799999999625899**********9******************9876.568899998873 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       798  (0.0445089); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1705.89
//
Query:       KHJ30222.1  [L=569]
Description: putative ash2-trithorax family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.048   13.8   0.1          2    8.6   0.0    3.0  3  SPRY      SPRY domain


Domain annotation for each model (and alignments):
>> SPRY  SPRY domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0   0.00011         2       1      81 [.     226     318 ..     226     338 .. 0.80
   2 ?    0.9   0.0     0.025   4.6e+02      80      96 ..     405     421 ..     400     429 .. 0.84
   3 ?   -0.6   0.0     0.078   1.4e+03     100     118 ..     449     467 ..     437     469 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00011
                 EEEEEEEET............CCTSSEEEEEEEETTSSSSSTSSSTSSTTEEEEETETTEEE...EETESCEEEESSSSTTSEEEEEEETTTTEEE CS
        SPRY   1 khyfevkiq............saeggsisvGlateqtdlsdksgegddrgswglcgdngtrt...saeqskaygkqparegdviGvalDleegels 81 
                 ++y+e +++            +  g +++ G+ ++++ l +    g d +s+gl+   g+++   +++   + g+ +  egdviG  ++l + +l 
  KHJ30222.1 226 RWYWECRVNcgtprleststtGISGPHVRMGIGRREATLDGP--VGFDCYSYGLRDLGGQKIhmsRPKAFFPNGE-NICEGDVIGFEVNLPSASLH 318
                 699999999999988888777777889999999999995544..3788889998887777665779999999999.999*********99988876 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.025
                 EEEEETTEEEEEEEEST CS
        SPRY  80 lsFtkngknlgvaFrnv 96 
                 ++ +kng+ +g+aF+n+
  KHJ30222.1 405 IKVYKNGILMGTAFENL 421
                 6679**********986 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.078
                 SEEEEEEE.STCEEEEESS CS
        SPRY 100 elfPvvslgngaslkinlg 118
                   +P+vs+ +g + ++n+g
  KHJ30222.1 449 GYYPIVSVFQGGCAEVNFG 467
                 689**************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       439  (0.0244855); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.22s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 4155.79
//
Query:       KHJ30223.1  [L=483]
Description: hypothetical protein EV44_g6093 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-10   40.4   0.0    4.9e-10   39.5   0.0    1.4  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
      0.017   15.3   0.1      0.037   14.2   0.1    1.7  1  RNase_H   RNase H
       0.08   13.0   0.1        0.3   11.2   0.1    2.0  1  Annexin   Annexin


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   0.0   8.2e-14   4.9e-10      34     176 ..      10     155 ..       4     167 .. 0.84

  Alignments for each domain:
  == domain 1  score: 39.5 bits;  conditional E-value: 8.2e-14
       RVT_2  34 karlvaqGfsqkagedydevfaPvirldsvrLllalaae.eelvvhqldvdsafLna..eldeevyvkqPpGfeidreeekvykLnkslyGlkqapllW 129
                 k+rlv+q f+    e+   + +P ++  s r+ll++++  ++  ++  d+  a++++  +l+ + y+++P+ +  d  ++   k+ k ly +  a+  W
  KHJ30223.1  10 KSRLVVQAFNDSGKEQV-LTQSPTLQRVSQRILLSISVSlKNHNLYLRDITQAYVQSrtQLIRDFYIRPPVEMGLD--KNTLLKVIKPLYAMAEAGNHW 105
                 9********98766665.6899****9*********98725678999********873368899*******99999..899****************** PP

       RVT_2 130 nekidkvLkk.lgferseaesGlyvrgtgegkl..ivalyvddlliagsd 176
                 + + +k+ k+ l++++s+  + +  r++ +  l  i ++  dd l +++d
  KHJ30223.1 106 FSTYHKLHKEvLKMSPSTYDHCFLYRKNLQRDLigITGMQTDDTLTSATD 155
                 *****999984689999999997777766666423578999999998876 PP

>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   6.2e-06     0.037       3      84 ..     309     410 ..     307     474 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 6.2e-06
                 SEEEEEEEEEECT.TTCEEEEE.EECTT........EEEEEEEC.CCCHHHHHHHHHHHHHHH.TT.SC........SEEE..EEES-HHHHHHHHCCC CS
     RNase_H   3 avvvYtDGsclgn.pgeggaga.vlykeg......arnisaple.eaqtnnraELsAvieaLk.alksd........ekvn..iytDSkYvvkgitqwv 81 
                 ++vv+tD+s+ +n   ++++g+ ++  ++       +  s + +  + +   aEL A+ +       ++         ++   + tDSk +++ i +  
  KHJ30223.1 309 KLVVFTDASYANNrDMSSQIGYvIVMMDDndnanlVHWTSIKCNrITRSVLAAELYAMAHGFDmGIAIKttmnamlrREISmyLCTDSKSLYECISKLG 407
                 589*********95555699*964455554654443322333333456777899999999776543333334445553333448999999999888755 PP

                 HHH CS
     RNase_H  82 hrw 84 
                  + 
  KHJ30223.1 408 TTQ 410
                 444 PP

>> Annexin  Annexin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   5.1e-05       0.3       2      36 ..     395     431 ..     394     432 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.1e-05
                 HHHHHHHHHSSSS.SCHHH.HHHHHHHSTHHHHHHHH CS
     Annexin   2 dAelLkkamkglG.tdekt.lieIlatRsnaqlqaif 36 
                 d + L++++++lG t+ek+ +i+Il+ R  +++++i 
  KHJ30223.1 395 DSKSLYECISKLGtTQEKRlMIDILCLRESYERREIT 431
                 66789********544444379*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (483 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       656  (0.0365888); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3339.53
//
Query:       KHJ30224.1  [L=145]
Description: hypothetical protein EV44_g2618 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       368  (0.0205254); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1046.60
//
Query:       KHJ30225.1  [L=526]
Description: putative duf1752-domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.5e-101  340.0  23.2    2.5e-99  333.9  19.8    2.1  2  DUF3295   Protein of unknown function (DUF3295)
    1.7e-11   43.8   1.1    3.3e-11   42.8   1.1    1.6  1  DUF1752   Fungal protein of unknown function (DUF1752)
  ------ inclusion threshold ------
       0.17   12.4   0.0       0.39   11.2   0.0    1.5  1  SMP       Seed maturation protein


Domain annotation for each model (and alignments):
>> DUF3295  Protein of unknown function (DUF3295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.9    0.0001       0.6      52      98 ..     107     153 ..      80     165 .. 0.73
   2 !  333.9  19.8  4.2e-103   2.5e-99     144     496 .]     149     526 .]     134     526 .] 0.77

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0001
     DUF3295  52 rhitsldLekmVvsIkekkeleplslpsikleseeeevdvtprassp 98 
                 rh  s+dL+++ ++I+ekke  p    ++++e + +++d  p++ s 
  KHJ30225.1 107 RHTNSDDLNRILTTITEKKETRPSMGLKPTEEDKISQQDSFPKKDSS 153
                 9******************9998876333333444445555544443 PP

  == domain 2  score: 333.9 bits;  conditional E-value: 4.2e-103
     DUF3295 144 avgsd......tsvssteksssvvrGFspsqi...sssyrsstklsseptpskkssesapkakpvqkkkqamFtLGgSsgdddeS....sleermaaka 229
                 +++s       +++ +t +s++vvrGFsp ++    ss+r  ++ ss pt  ++ + +   +k++q+k +  F+LGgSs+d  e           ++++
  KHJ30225.1 149 KKDSSvklivpEEKPKT-NSTNVVRGFSPVRLlrtGSSRRFDVNPSSIPT--ADITAA-APTKNTQPKTKMIFALGGSSEDSFEPclstR----VSSRE 239
                 22222233332333333.5899*******986221556666655544333..333332.45566678999*********66444444441....33332 PP

     DUF3295 230 k................sseersslsdalkkks.....slseaqkkqtsfkdevatrtikessaededaiesddde.idESAIedddddssdWEDsvee 306
                 +                ss+e++ l  + + ++      ++++ ++ t+f++eva rti e +a  +d++esd+++ ++ESAI d+dd ss+WEDsv  
  KHJ30225.1 240 EiekphpqkntifsfgaSSNEDETLPGNTDGTAackdlLNKNSIRRPTTFQEEVARRTILE-EAIVDDVFESDEEDmVNESAI-DEDD-SSEWEDSVGG 335
                 244556778899*9*99999999999888666458888888999****************7.89999******9555******.5555.8********* PP

     DUF3295 307 sgrssvdekelFqRVdSrpnLtSrrSLlTlmlhqpdrakalgnaasrStpalqrsrtsspngpslaaspe.dsdeaelmm.......pinevprskPii 397
                 sg++sv+ek++FqRVdSr+nLtSrrSL+T+mlhq+dr++al n+a++S +a   +   + ++    +spe +s +a+ ++       p ++ p +kPi 
  KHJ30225.1 336 SGNASVEEKSFFQRVDSRANLTSRRSLITTMLHQQDRMNALMNEAMKSKSASTINP--KLTMTKSLESPEiESRNAHYEVvekiefvPETTYPNAKPIE 432
                 *****************************************999987777755433..2222233445552444555555666677899999999***9 PP

     DUF3295 398 vtttntakqqvAlSPrTtRRnMLatELTeSLRrhLLWErqqksstanAvlkRrhtahdvanLkqyPekvqlkkdeeesknsswnqYfdkglgeYhakGW 496
                    +++  +q+AlSPrTtRRnMLa+ELT SLR+hLLWEr+qks+t+nA+lkRrht++dva Lkqy e+++l k   ++ nssw++Yfd gl+eY a+GW
  KHJ30225.1 433 RLGHSS--KQLALSPRTTRRNMLASELTVSLRQHLLWERKQKSQTTNAALKRRHTSQDVAHLKQYSEPSHLIK---DEINSSWDNYFDGGLSEYNARGW 526
                 888875..89*************************************************************95...679******************** PP

>> DUF1752  Fungal protein of unknown function (DUF1752)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.8   1.1   5.6e-15   3.3e-11       1      28 []      32      59 ..      32      59 .. 0.96

  Alignments for each domain:
  == domain 1  score: 42.8 bits;  conditional E-value: 5.6e-15
     DUF1752  1 lWkyytkkkkdlpngeRLENlSWRlWnk 28
                +W+++t++ ++l+ g+RLENlSWR W +
  KHJ30225.1 32 MWTVFTHCASALEEGRRLENLSWRVWTR 59
                7*************************75 PP

>> SMP  Seed maturation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   6.5e-05      0.39      14      36 ..       5      27 ..       2      35 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 6.5e-05
         SMP 14 agdkpVtpeDAaavqaAEaraag 36
                + dkpV + DAaa+q+   r++ 
  KHJ30225.1  5 LLDKPVLRVDAAAIQQVDLRNLE 27
                569*************9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (526 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       848  (0.0472977); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.23s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3851.53
//
Query:       KHJ30226.1  [L=186]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
        9.5    6.3   8.6         28    4.8   3.0    2.4  2  PhnA_Zn_Ribbon  PhnA Zinc-Ribbon


Domain annotation for each model (and alignments):
>> PhnA_Zn_Ribbon  PhnA Zinc-Ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   3.0    0.0016        28       3      11 ..      68      76 ..      61      83 .. 0.88
   2 ?    3.9   0.7    0.0029        52       4      12 ..      88      96 ..      82      97 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0016
  PhnA_Zn_Ribbon  3 pkCplCaSe 11
                    p+C++C+S 
      KHJ30226.1 68 PACENCSST 76
                    99*****95 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.0029
  PhnA_Zn_Ribbon  4 kCplCaSey 12
                    kC +C+S++
      KHJ30226.1 88 KCRNCGSSH 96
                    9******97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1408.40
//
Query:       KHJ30227.1  [L=175]
Description: hypothetical protein EV44_g3612 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       345  (0.0192426); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1320.55
//
Query:       KHJ30228.1  [L=686]
Description: putative ras gtpase activating protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-09   36.5   0.1    7.1e-09   35.7   0.1    1.6  1  RasGAP    GTPase-activator protein for Ras-like GTPase
    9.7e-07   29.0   0.0    3.5e-06   27.2   0.0    2.0  2  RasGAP_C  RasGAP C-terminus
    6.6e-05   22.4  24.4        0.3   11.0   0.8    8.8 10  IQ        IQ calmodulin-binding motif
  ------ inclusion threshold ------
      0.034   13.2   0.3      0.034   13.2   0.3    2.2  3  DHC_N2    Dynein heavy chain, N-terminal region 2
        0.8    9.3   3.2         17    5.0   0.3    2.8  3  Snf7      Snf7


Domain annotation for each model (and alignments):
>> RasGAP  GTPase-activator protein for Ras-like GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.1     2e-12   7.1e-09     105     206 ..     423     524 ..     173     525 .. 0.91

  Alignments for each domain:
  == domain 1  score: 35.7 bits;  conditional E-value: 2e-12
      RasGAP 105 mleknldkLkelvneildsIfksleqlPvgiRiickqirekvkekfpdaseeeilnligsflflrfliPaivnPklfglvdkqiseeqrrnLtliaKll 203
                 ++e  ++ ++ lv+ +l s  + ++++P+giR++ + i   + ++f ++ ++ +l+ +g+  +  +l Pa ++P+  g++++q+++  +r L++iaK+l
  KHJ30228.1 423 TAEIDCKRIETLVDDFLLSPESLVNKMPYGIRFVGQDIFPALFQRFSSEPQQLLLQTVGNRPWKFYLQPARLAPEITGIFERQMTPLLKRDLGEIAKVL 521
                 3447899999************************************99998999********************************************* PP

      RasGAP 204 qnl 206
                  ++
  KHJ30228.1 522 NQI 524
                 998 PP

>> RasGAP_C  RasGAP C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       2.4   8.6e+03      61      78 ..     382     399 ..     370     403 .. 0.78
   2 !   27.2   0.0   9.8e-10   3.5e-06      75     137 .]     539     605 ..     513     605 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 2.4
    RasGAP_C  61 tLseknnylesqlesYka 78 
                 +L+ +n+  +++le Y++
  KHJ30228.1 382 ELKARNKSSRKKLEAYQQ 399
                 567777777888888776 PP

  == domain 2  score: 27.2 bits;  conditional E-value: 9.8e-10
    RasGAP_C  75 sYkayienvleql........kkkkgklpfskqyfkkrelkksgklpkfgsykysakqLeekgVLleiegl 137
                  ++ay+e ++e          ++         ++  +rel++sg++ kfgs+kysa    +kgVL++++g+
  KHJ30228.1 539 PLNAYVEDAIERTsvifaniiSD----ADADADAGAERELERSGRKAKFGSFKYSAPPFFDKGVLVSWKGY 605
                 55666666666663443333311....3345678899*******************************985 PP

>> IQ  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1     0.019        67       3      19 ..      20      36 ..      19      38 .. 0.90
   2 !   11.0   0.8   8.4e-05       0.3       5      20 ..      52      67 ..      52      68 .. 0.93
   3 ?    0.6   0.0      0.18   6.4e+02       6      16 ..      83      93 ..      82      95 .. 0.77
   4 ?    3.6   0.1      0.02        70       6      20 ..     113     127 ..     112     128 .. 0.89
   5 ?   -2.0   0.0       1.3   4.6e+03       4       9 ..     136     141 ..     135     142 .. 0.84
   6 ?   -0.4   0.0       0.4   1.4e+03       6      20 ..     143     157 ..     142     158 .. 0.84
   7 ?    4.5   0.0      0.01        36       4      19 ..     171     186 ..     168     188 .. 0.83
   8 !    6.4   0.0    0.0024       8.7       7      18 ..     204     215 ..     203     215 .. 0.96
   9 ?   -1.1   0.1      0.63   2.3e+03      10      19 ..     237     246 ..     236     248 .. 0.78
  10 ?    1.1   0.1      0.13   4.6e+02       4      17 ..     261     274 ..     260     276 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.019
                HHHHHHHHHHHHHHHHH CS
          IQ  3 aaikIQaawRGylaRkr 19
                ++ +IQa  ++  +R++
  KHJ30228.1 20 SIKTIQASAKAVIVRRN 36
                6889***********97 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 8.4e-05
                HHHHHHHHHHHHHHHH CS
          IQ  5 ikIQaawRGylaRkry 20
                ikIQ+ +RG + R+++
  KHJ30228.1 52 IKIQSIVRGNQSRQQC 67
                8************997 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.18
                HHHHHHHHHHH CS
          IQ  6 kIQaawRGyla 16
                 +Q+ +RG   
  KHJ30228.1 83 SFQSIFRGAHS 93
                68*****9655 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.02
                 HHHHHHHHHHHHHHH CS
          IQ   6 kIQaawRGylaRkry 20 
                 ++Q+  RG + R ++
  KHJ30228.1 113 ILQSTSRGNRYRLHH 127
                 79**********987 PP

  == domain 5  score: -2.0 bits;  conditional E-value: 1.3
                 HHHHHH CS
          IQ   4 aikIQa 9  
                 a+kIQ 
  KHJ30228.1 136 ATKIQW 141
                 9****6 PP

  == domain 6  score: -0.4 bits;  conditional E-value: 0.4
                 HHHHHHHHHHHHHHH CS
          IQ   6 kIQaawRGylaRkry 20 
                  +Q+  R+   R +y
  KHJ30228.1 143 NLQSILRANDSRVEY 157
                 79*****99888887 PP

  == domain 7  score: 4.5 bits;  conditional E-value: 0.01
                 HHHHHHHHHHHHHHHH CS
          IQ   4 aikIQaawRGylaRkr 19 
                   ++Q+ +R+ + R+ 
  KHJ30228.1 171 FSLLQSIIRANVLRCD 186
                 5689**********86 PP

  == domain 8  score: 6.4 bits;  conditional E-value: 0.0024
                 HHHHHHHHHHHH CS
          IQ   7 IQaawRGylaRk 18 
                 IQ+ +RG++ R+
  KHJ30228.1 204 IQSLIRGMVLRR 215
                 9**********8 PP

  == domain 9  score: -1.1 bits;  conditional E-value: 0.63
                 HHHHHHHHHH CS
          IQ  10 awRGylaRkr 19 
                   RG+l R +
  KHJ30228.1 237 LARGFLRRNK 246
                 67****9986 PP

  == domain 10  score: 1.1 bits;  conditional E-value: 0.13
                 HHHHHHHHHHHHHH CS
          IQ   4 aikIQaawRGylaR 17 
                 + k+Qa+ R  + R
  KHJ30228.1 261 IKKLQAVSRSVRSR 274
                 579******99988 PP

>> DHC_N2  Dynein heavy chain, N-terminal region 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1      0.94   3.4e+03     181     217 ..      14      50 ..      11      91 .. 0.65
   2 ?   13.2   0.3   9.5e-06     0.034     214     296 ..     127     206 ..      97     214 .. 0.86
   3 ?   -1.0   0.0       0.2   7.3e+02      80     122 ..     320     358 ..     303     421 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.94
                 HHHHHHHHHHTCSSSTT..THHHHHHHHHHHHHHHHH CS
      DHC_N2 181 ledhivklqsmksspyvkpfeeeveewekklsrlqei 217
                 l+d+ ++++++++s  +  ++ ++++++ +l++++ +
  KHJ30228.1  14 LSDESISIKTIQASAKAVIVRRNLSNLKGQLKEISPV 50 
                 6666666666666644434566666666666665544 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 9.5e-06
                 HHHHHHHHHHHHHHHHHHHHHT.THHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTSGGGG...STTHHHHHHHHHHHHHHHHH CS
      DHC_N2 214 lqeildewlkvQrkWlyLepifssedirkqlpeeakrFksvdkewkkimkevskdpnvleatskpgllekleelneqlekiqk 296
                  q ++d +l +  +W+ L++i+ ++d r + +   ++ k  + ++  +++++ +  nvl++  ++    +l++ +e+l +iq 
  KHJ30228.1 127 HQRVIDRLLATKIQWVNLQSILRANDSRVEYNATINKLKAHTASFS-LLQSIIRA-NVLRCDLNR-KSLTLQHEQESLSEIQS 206
                 5899******************************************.88888675.8***74433.33359999999999997 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.2
                 XXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXX.XXXXXXXXX CS
      DHC_N2  80 plieelrnpalrerHwkelsellgv.ikdpdseesltlgdllel 122
                  +++++r+  + e++ ++l  ++ +  +     +++tl++++ +
  KHJ30228.1 320 TVVRQVRQNEMAEQYIDQLDTQISFlVT-----NKITLDEVVRH 358
                 6788888999999999999998864322.....35788877765 PP

>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.3    0.0047        17      38      91 ..      25      78 ..       3      80 .. 0.82
   2 ?   -2.8   0.0       1.2   4.2e+03      63      91 ..     140     168 ..     133     177 .. 0.82
   3 ?    3.7   0.0     0.011        41      42      78 ..     320     356 ..     278     363 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0047
                T-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Snf7 38 gnkdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqga 91
                +  ++a ++ + + ++  ql++++ +++++++++  +++ ++ +  +++mk ++
  KHJ30228.1 25 QASAKAVIVRRNLSNLKGQLKEISPVYIKIQSIVRGNQSRQQCQLSIDGMKMAT 78
                347899999*****************************************9886 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Snf7  63 qlanleqvslaienlksnkevlnamkqga 91 
                 q  nl++++ a+++    ++++n +k  +
  KHJ30228.1 140 QWVNLQSILRANDSRVEYNATINKLKAHT 168
                 56799999999999999999999999766 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.011
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Snf7  42 ralllLKqkkryekqldqldnqlanleqvslaienlk 78 
                 ++ +  +q  ++e+++dqld+q + l +   ++++  
  KHJ30228.1 320 TVVRQVRQNEMAEQYIDQLDTQISFLVTNKITLDEVV 356
                 566778999*************998887777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (686 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.40
# Mc/sec: 5154.49
//
Query:       KHJ30229.1  [L=537]
Description: putative ras gtpase activating protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.2e-13   49.1   0.0    1.4e-12   47.8   0.0    1.8  1  CH         Calponin homology (CH) domain
     0.0087   15.8   7.7      0.081   12.8   0.7    3.6  3  IQ         IQ calmodulin-binding motif
  ------ inclusion threshold ------
      0.016   15.1   0.0      0.041   13.7   0.0    1.8  1  CAMSAP_CH  CAMSAP CH domain
      0.024   14.9   0.0      0.067   13.5   0.0    1.8  1  CDC24      CDC24 Calponin
      0.069   13.3   0.0       0.35   11.0   0.0    2.3  2  CH_2       CH-like domain in sperm protein


Domain annotation for each model (and alignments):
>> CH  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.0   3.9e-16   1.4e-12       6     105 ..     245     344 ..     240     348 .. 0.88

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 3.9e-16
                 HHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT.HHHHHHHHHHHHHHHHHHTTCHTTSS.-HHHHHTTSHH.HHHHHHH CS
          CH   6 ellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnks.efkkleNinlaldvaekklgvpkvli.eaedlvegknk.svltlla 101
                 e+ +Wi+++l++ +p   + ++ee lrDGv L++++ +l+p++      +++ ++++ +Ni++++ +++ ++ +p+    e +dl+e+kn  +v+++++
  KHJ30229.1 245 EAKEWIEKVLQRPIP--PIVQLEETLRDGVTLAEIVAALKPEKTIRIFRHPKlQYRHSDNIATFFRFLA-DVELPDPFRfELTDLYEKKNIpKVIHCIH 340
                 6789******98655..568*********************984444444448****************.*******999******************* PP

                 HHHH CS
          CH 102 qLfr 105
                 +L++
  KHJ30229.1 341 ALSW 344
                 *987 PP

>> IQ  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.2      0.01        37       5      18 ..     456     469 ..     456     471 .. 0.89
   2 !   12.8   0.7   2.3e-05     0.081       1      19 [.     478     496 ..     478     496 .. 0.92
   3 ?   -0.1   0.0      0.32   1.1e+03       5      19 ..     512     526 ..     510     527 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.01
                 HHHHHHHHHHHHHH CS
          IQ   5 ikIQaawRGylaRk 18 
                 i +Q+ +RG  aR+
  KHJ30229.1 456 IHLQSMIRGAFARQ 469
                 679******99997 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 2.3e-05
                 HHHHHHHHHHHHHHHHHHH CS
          IQ   1 rkaaikIQaawRGylaRkr 19 
                 r+ a+ +Q+  RG+l+R+r
  KHJ30229.1 478 RRFATSLQSIARGFLTRQR 496
                 6789*************96 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.32
                 HHHHHHHHHHHHHHH CS
          IQ   5 ikIQaawRGylaRkr 19 
                 i +Q  +R+  +R +
  KHJ30229.1 512 INLQNLIRAKSVRSK 526
                 789******999975 PP

>> CAMSAP_CH  CAMSAP CH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.1e-05     0.041       9      82 ..     257     327 ..     251     330 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.1e-05
   CAMSAP_CH   9 lippvedllrdlsdGvaLaalihfYcPq.liklediclkesmsladslyNiqllqefcer.kLgnsvfhltleDll 82 
                  ipp+  l ++l+dGv La+++  + P+ +i++    +++   +    +Ni +++ f ++ +L  ++f ++l Dl 
  KHJ30229.1 257 PIPPIVQLEETLRDGVTLAEIVAALKPEkTIRI----FRHPKLQYRHSDNIATFFRFLADvEL-PDPFRFELTDLY 327
                 68899999999****************725776....777777888889*****999887366.999999999985 PP

>> CDC24  CDC24 Calponin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.9e-05     0.067       2      86 ..     260     340 ..     259     343 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.9e-05
       CDC24   2 PvtqlwkllrqGspLlalfNalkpeeklevdevksddlkvcKksvydFllackkeLgfedeelftisdlfsedttdlvkvlkvvn 86 
                 P+ ql ++lr G  L  +  alkpe+++++ ++ + + + +   +  F    +++++++d   f ++dl+++  +++ kv++ ++
  KHJ30229.1 260 PIVQLEETLRDGVTLAEIVAALKPEKTIRIFRHPKLQYRHSD-NIATFF-RFLADVELPDPFRFELTDLYEK--KNIPKVIHCIH 340
                 999***************************665555555543.344444.3456889999999999999976..46777777776 PP

>> CH_2  CH-like domain in sperm protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.1   7.6e+03      39      53 ..     154     168 ..     151     171 .. 0.80
   2 ?   11.0   0.0   9.7e-05      0.35       4      69 ..     249     315 ..     247     347 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.1
        CH_2  39 vdlhnysngsslaak 53 
                  dlh+++++++ + +
  KHJ30229.1 154 SDLHSFQKSTTSQLR 168
                 689***999988765 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 9.7e-05
        CH_2   4 Wlqs.ldlsr.svknlkrdfsdGvlvAeilkkyypklvdlhnysngsslaaklnNWetLekvlkklgi 69 
                 W+++ l+    ++ +l++ + dGv +Aei++ + p+   +  +++ +   +  +N  t+ ++l  +++
  KHJ30229.1 249 WIEKvLQRPIpPIVQLEETLRDGVTLAEIVAALKPE-KTIRIFRHPKLQYRHSDNIATFFRFLADVEL 315
                 666643322203448999******************.9999999999999999999999999966554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (537 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       768  (0.0428356); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3789.18
//
Query:       KHJ30230.1  [L=655]
Description: putative pre-rrna-processing protein esf1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-14   54.0  14.1    2.6e-14   52.7   0.5    3.7  3  NUC153    NUC153 domain


Domain annotation for each model (and alignments):
>> NUC153  NUC153 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.9      0.03   5.3e+02       1      13 [.      14      26 ..      14      26 .. 0.78
   2 !    7.9   0.8   0.00015       2.6       1      13 [.      39      51 ..      39      51 .. 0.97
   3 !   52.7   0.5   1.5e-18   2.6e-14       1      29 []     616     644 ..     616     644 .. 0.99

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.03
      NUC153  1 DpRFkalFedhdF 13
                DpRFk + +d+ F
  KHJ30230.1 14 DPRFKFINTDPRF 26
                9999977777766 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00015
      NUC153  1 DpRFkalFedhdF 13
                D RF+++ +d+dF
  KHJ30230.1 39 DKRFSRMLTDEDF 51
                99**********9 PP

  == domain 3  score: 52.7 bits;  conditional E-value: 1.5e-18
      NUC153   1 DpRFkalFedhdFaIDptspeFkktnpmk 29 
                 DpRF+++Fe+h++aIDp++p+Fk tn+mk
  KHJ30230.1 616 DPRFGKVFESHEYAIDPSNPRFKPTNAMK 644
                 9***************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (655 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1746  (0.0973841); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.78u 0.32s 00:00:01.10 Elapsed: 00:00:00.46
# Mc/sec: 4306.96
//
Query:       KHJ30231.1  [L=131]
Description: hypothetical protein EV44_g4033 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 1021.47
//
Query:       KHJ30232.1  [L=844]
Description: putative ubiquitin-specific protease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-45  153.9   0.0    1.4e-44  152.5   0.0    1.7  1  UCH       Ubiquitin carboxyl-terminal hydrolase
    4.4e-07   29.8   1.0    4.4e-07   29.8   1.0    3.6  2  UCH_1     Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.5   0.0   1.6e-48   1.4e-44       1     249 [.     387     758 ..     387     773 .. 0.85

  Alignments for each domain:
  == domain 1  score: 152.5 bits;  conditional E-value: 1.6e-48
                 -EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-........TT.TTS.TTH....HHHHHHHHHHHHH....SH-CCEE--HHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxx....xxxxxxxxxxxxx....xxxxxxxxxxxxxxx RF
         UCH   1 tGlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkel.......nesnplgkkge....lakalkdlfkell....kskskavsPkklkkt 84 
                 +Gl+N+Gn Cymns+lQ+L+ +  + ++l + +e++  s ++ +               +++      ak+  +l  +l     ++  + ++P+ ++++
  KHJ30232.1 387 RGLVNAGNMCYMNSILQVLVFCTLFFNFLDQVSERAIYSFKSATPlldamilF------MREYsiihKAKSADKLKLQLKegdqEKYGEPFTPDYIYNA 479
                 59*****************************8777666665544444332221......222212112333333444444877877888********** PP

                 HHHHSGG..GTSSSTCEHHHHHHHHHHHHHHHHCC..............................................HCCCHHH..HHHCCCTTS CS
                 xxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx..............................................xxxxxxx..xxxxxxxxx RF
         UCH  85 lsklaks..fsgykqqDaqEflaflLdqlhedlnr..............................................evaeekw..kkhlkrnds 133
                 ++ l +   ++ ++qqDa+Efl flL++lh+++ +                                              + ++ ++   + +++ + 
  KHJ30232.1 480 INYLPRFssMRRGHQQDAEEFLGFLLEGLHDECIQaigslsnntnsnpispvtsvnspsnrtnftqsitsteekawlevgpK-QKAAItrSSGITTTET 577
                 *998776446699********************999******************************************9863.33333469999***** PP

                 HHHHHH-EEEEE............................................................EEEEEEB-SEEEEEEESEEETEE..EE CS
                 xxxxxxxxxxxx............................................................xxxxxxxxxxxxxxxxxxxxxxx..xx RF
         UCH 134 litdlfegqlks............................................................klklkrlPeiLiihlkRfsynss..ks 170
                 ++t++f+g+l+s                                                            ++ +++lP++Li+hlkRf+y+++   +
  KHJ30232.1 578 PVTKIFGGNLRSelrvpglkdsvtmepyqsllldigapnvsniidalkglnrsellhgdfkspkgpnvtatkQVFIETLPPVLILHLKRFQYDNTggTQ 676
                 ********************************************************************************************9999*** PP

                 E--SEEB--SEEE-GGGBSS-BTTS-...TCS-BEEEEEEEEEES.CTTSEEEEEEEECTTTTEEEEEETTEEEEE-HHCCCT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 171 Klntkvefpeeldlssylaeekkkkt...eekkkYeLiavvvHsG.slssGHYvayiknekngkWykydDetvkevkeeeevl 249
                 K+ +k+ +p+eldl + +   +k+     +  +kY+Li+ v+H+G ++s GHY++ +++++ ++W+++dD+ ++++++e +v 
  KHJ30232.1 677 KIWKKIGYPLELDLPKEVFPRQKRLAyvrSGFPKYKLISAVYHHGkNASVGHYTVDVRRQDGQEWIRIDDTAITRIRSE-DVA 758
                 **************97666555544311133456************************99999*************977.554 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -14.1  15.5         2   1.8e+04     124     200 ..     149     281 ..      57     372 .. 0.46
   2 !   29.8   1.0   4.9e-11   4.4e-07       2     320 .]     388     749 ..     387     749 .. 0.66

  Alignments for each domain:
  == domain 1  score: -14.1 bits;  conditional E-value: 2
                 x..............................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............... RF
       UCH_1 124 s..............................................seeesaieqllgtkaettirclkCgseksrksstlvl............... 161
                                                                             +a+ ti+  +    k+ +s+ l++               
  KHJ30232.1 149 FakpfkpplpwysrpdldwpqrrtrkkrrpvlqiplennktihnhseL------------SASATIKEASSVLSKTSPSNCLITeknlstanaqittsp 235
                 033344444444444444444444444444444443222222222221............222222222222222222222222221111111111122 PP

                 .xxxxxx......xxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 162 .dlkyPk......psne..kkeakvtfasilksslerekttrawCekC 200
                  +l++P       +  +   ++++ ++   l +s+ r+  ++a  ++ 
  KHJ30232.1 236 nKLIAPDpvpdkkS--NqkLNTPTLSIIPALPKSIPRQALSPASTKES 281
                 23333212222221..11222223344444444444444444444444 PP

  == domain 2  score: 29.8 bits;  conditional E-value: 4.9e-11
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxx....................xxxxxxx.xxxxxxxxxxxxxxxxxxx RF
       UCH_1   2 GLEnhivnsYlNslLQvlyfipplrnlalshlak..eckkehcLlcElgflf....................dmldkak.glncqasnFlralssipea 77 
                 GL n  + +Y+Ns+LQvl f+++++n++ +  ++     k    l ++  lf                    +  d+ k g++    +  +a++ +p  
  KHJ30232.1 388 GLVNAGNMCYMNSILQVLVFCTLFFNFLDQVSERaiYSFKSATPLLDAMILFmreysiihkaksadklklqlKEGDQEKyGEPFTPDYIYNAINYLPRF 486
                 99999****************888888766665533566666667777777766666666666666666554444444458888888888888888888 PP

                 xxxxxxxxxxxxxx......................xxxxxxxxxxxx..x.xxxxxxxxxxxxxxxxxxxx..................xxxxxxxxx RF
       UCH_1  78 salglileeeeete......................kssaislssliq..s.fnrflldqlekelketkkns..................seeesaieq 133
                 s+++   ++++e e                      +++++ +s+++   s  nr  + q  + ++e+                      +++e+++++
  KHJ30232.1 487 SSMRRGHQQDAE-EflgflleglhdeciqaigslsnNTNSNPISPVTSvnSpSNRTNFTQSITSTEEK---AwlevgpkqkaaitrssgiTTTETPVTK 581
                 888886555433.2478888888888888888887744555555555332134443333333332221...123456666999999999999******* PP

                 xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx.xxx RF
       UCH_1 134 llgtkaettirclkCgsek.srksstlvldlkyPkpsnekkeakvtfasilksslerekttrawCekC.kryqpteqrktvknlPpvLalnakle.eee 229
                 ++g ++ +++r    +    +++  +l ld+ +P        + +++ + lk   +r +   +  ++      + +++  ++ lPpvL+l++k++  ++
  KHJ30232.1 582 IFGGNLRSELRVPGLKDSVtMEPYQSLLLDIGAP--------NVSNIIDALKGL-NRSELLHGDFKSPkGPNVTATKQVFIETLPPVLILHLKRFqYDN 671
                 ************9755444488888888899775........223455555543.333333333344413445556666788***********996553 PP

                 ...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 230 ...elelwktknwlpleiklsldedknleeklkeerekakaekeikvYeLqsvvvhigdskesghLvslvkvaekelerdppesqWylFNDflV 320
                    ++++wk+    ple++l   +++++ +    ++  a  +++  +Y+L+s v+h g++ + gh+   v+         ++ ++W+ ++D  +
  KHJ30232.1 672 tggTQKIWKKI-GYPLELDL---PKEVFPR----QKRLAYVRSGFPKYKLISAVYHHGKNASVGHYTVDVRR--------QDGQEWIRIDDTAI 749
                 45578999994.34566666...3332222....233345588999************99889***877773........23469999999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (844 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1165  (0.0649785); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.28s 00:00:01.02 Elapsed: 00:00:00.50
# Mc/sec: 5105.95
//
Query:       KHJ30233.1  [L=485]
Description: putative microtubule associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-23   81.0  21.3    5.3e-08   33.4   0.2    7.0  6  WD40      WD domain, G-beta repeat
      7e-19   68.1   0.4    1.3e-18   67.2   0.4    1.5  1  NLE       NLE (NUC135) domain
     0.0012   17.5   5.6      0.041   12.5   1.0    3.5  4  Nup160    Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   4.3   0.00022       1.3      10      38 .]     110     154 ..     102     154 .. 0.81
   2 !   16.4   0.1   2.2e-06     0.013       7      38 .]     168     199 ..     160     199 .. 0.79
   3 !   19.5   0.1   2.2e-07    0.0013       4      38 .]     214     249 ..     211     249 .. 0.84
   4 !    5.1   0.0    0.0075        45       3      36 ..     285     320 ..     283     322 .. 0.83
   5 !   33.4   0.2   8.9e-12   5.3e-08       3      38 .]     374     411 ..     372     411 .. 0.92
   6 ?    3.5   0.0     0.024   1.5e+02       9      36 ..     438     474 ..     428     474 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00022
                 S.SSEEEEE....EETTSSE...........EEEEETTSEEEEEE CS
        WD40  10 H.ssvtsla....fspdgaw...........lasGsdDgtvriWd 38 
                 H ++v++++     s+ g+w           ++s+s+Dg +riW+
  KHJ30233.1 110 HdDWVSCVDvlssSSKAGSWgsykravdqdlILSASYDGLLRIWS 154
                 8666999999999777777788888888887789999*******5 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 2.2e-06
                 EESS.SSE.EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ssv.tslafspdgawlasGsdDgtvriWd 38 
                 l GH ss+ t++    + + ++sG+ D+t+++W+
  KHJ30233.1 168 LGGHtSSIkTAM--FMSPTQVVSGGLDRTIKVWN 199
                 789*88898888..333344669**********8 PP

  == domain 3  score: 19.5 bits;  conditional E-value: 2.2e-07
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                   +l GH +s+ s++f+  +  l+sGs Dgtv +W+
  KHJ30233.1 214 SLELLGHtGSIESIDFHGPSGRLISGSTDGTVGVWS 249
                 55677**888*****8888888889**********5 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.0075
                 EEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawla.sGsdDgtvri 36 
                 +l +l+   ++++ + f+p  + +a s+s D+tvr 
  KHJ30233.1 285 PLSILSSNkGPISEVIFNPLDHTVAySASLDHTVRT 320
                 5677888866699999*******9889999****95 PP

  == domain 5  score: 33.4 bits;  conditional E-value: 8.9e-12
                 EEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 
                 ++ tl+GH + v s+a +p++++ l+sGs Dgt+r+Wd
  KHJ30233.1 374 QVMTLRGHsNKVVSIAPDPESNFgLVSGSHDGTCRVWD 411
                 5789****77799***********99**99*******9 PP

  == domain 6  score: 3.5 bits;  conditional E-value: 0.024
                 SSSS..........EEEEEEETTSSEEEEEETTSEEEE CS
        WD40   9 GHss..........vtslafspdgawlasGsdDgtvri 36 
                 GH++          v +++++++  + +sG++D+ v i
  KHJ30233.1 438 GHKGkrpvggegvkVFGVKWDKEVGM-VSGGEDKRVQI 474
                 78444677777777899955555555.68*****9965 PP

>> NLE  NLE (NUC135) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.2   0.4   2.2e-22   1.3e-18       1      65 []      14      80 ..      14      80 .. 0.95

  Alignments for each domain:
  == domain 1  score: 67.2 bits;  conditional E-value: 2.2e-22
         NLE  1 vqvrFvtkdedeslavpgtplsvPasltrkqLselvnk..LlkeekpvpFdFlidgellrtsLeehL 65
                vqv+F+t+++d +l  ++ +l vP++++r++Ls ++n+  +l+ e+p+pFdFlidg++lrtsLee++
  KHJ30233.1 14 VQVYFTTSSKDIELNEEKRQLLVPSNVQRYGLSMILNSesMLNTESPIPFDFLIDGNFLRTSLEEYI 80
                8********9999************************9999995578******************96 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.25   1.5e+03      74     109 ..      88     123 ..      85     126 .. 0.86
   2 !    4.5   0.1    0.0019        11     229     253 ..     137     160 ..     105     188 .. 0.77
   3 ?   -1.8   0.0      0.15   8.7e+02     238     248 ..     191     201 ..     171     209 .. 0.81
   4 !   12.5   1.0   6.9e-06     0.041     228     316 ..     302     385 ..     233     420 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.25
                 -EEEEEE-SS-SESSSESEEEEESSSEEEEEEEESS CS
      Nup160  74 nnnlrldFpssllpscvsftdsesgdvlivivttts 109
                  ++l+l+  +sl+p+++ ++ + ++ v +v+v+ +s
  KHJ30233.1  88 EITLNLQYVRSLIPPSFEASFEHDDWVSCVDVLSSS 123
                 578999999999999999999999889999999887 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0019
                 TTTEEEEEETT-EEEEEETTTTEEE CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkcl 253
                 +q++++++s dg Lr+W+ +  + +
  KHJ30233.1 137 DQDLILSASYDGLLRIWSKSG-QNI 160
                 8****************7544.443 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.15
                 TT-EEEEEETT CS
      Nup160 238 rdgkLrvWnll 248
                 +d++++vWn++
  KHJ30233.1 191 LDRTIKVWNYK 201
                 8********87 PP

  == domain 4  score: 12.5 bits;  conditional E-value: 6.9e-06
                 ...TTTEEEEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESEEESSSSEEEE..........E--GGG-EEEEEEEEEEE-.. CS
      Nup160 228 i..gqtylfalsrdgkLrvWnlltgkclatidllrdeeaqdessskstldpaesslirvsdggqsylvvtyspssggefkvwkvkkedtsv 316
                    + t+++++s+d+++r  +l+t  ++ t+++l       +s   +   p +s+++ ++ + ++  +++   +s ++++v + +  +++v
  KHJ30233.1 302 NplDHTVAYSASLDHTVRTFDLSTSILVDTRTTL-------NSLLCLAALPGTSTQLLAAGTSARHIILLDPRVSAKSTQVMTLRGHSNKV 385
                 25799*************************7776.......34444444455555555553444444443355555555555555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       336  (0.0187406); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 3332.93
//
Query:       KHJ30234.1  [L=623]
Description: putative ring finger domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.7e-07   29.1   6.3    1.7e-06   27.8   6.3    1.8  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
      2e-05   24.5   3.6      5e-05   23.2   3.6    1.7  1  zf-RING_5     zinc-RING finger domain
    2.1e-05   24.3   5.9    6.5e-05   22.7   5.9    1.8  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    2.2e-05   24.7   7.9    0.00095   19.4   2.5    3.0  3  zf-RING_2     Ring finger domain
    0.00013   22.0  10.0    0.00027   20.9   7.3    2.6  2  zf-RING_UBOX  RING-type zinc-finger
     0.0033   17.5   7.3      0.035   14.3   7.8    2.3  2  zf-C3HC4_4    zinc finger of C3HC4-type, RING
     0.0039   17.0   6.0     0.0081   16.0   1.8    2.5  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.014   15.3   9.2        0.1   12.5   9.0    2.5  2  Prok-RING_4   Prokaryotic RING finger family 4


Domain annotation for each model (and alignments):
>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   6.3   7.5e-10   1.7e-06       1      41 []     112     162 ..     112     162 .. 0.89

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 7.5e-10
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHC...........TSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilks...........rkkvkCPlC 41 
                 CpiCl+ +  p  +l+C+H +C +C+ +++ s            +  +CP+C
  KHJ30234.1 112 CPICLSRPIVPR-MLTCGHILCLPCLIRYVHSgdinvvipkkkARWIECPIC 162
                 ************.*******************99999999644334459999 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   3.6   2.2e-08     5e-05       2      42 ..     112     162 ..     111     164 .. 0.96

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 2.2e-08
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll.............ekeavCpiC 42 
                 C++C ++      + +++CgHi+C  Cl ++              ++  +CpiC
  KHJ30234.1 112 CPICLSRP---IVPRMLTCGHILCLPCLIRYVhsgdinvvipkkkARWIECPIC 162
                 9******9...99*****************************9999999***** PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   5.9   2.9e-08   6.5e-05       2      44 ..     109     163 ..     108     168 .. 0.87

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 2.9e-08
                 GSB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHH.............TT-B-TTT- CS
  zf-C3HC4_3   2 deeCviClerprnvvllpCgHlvlCeeCaekllk.............rkkkCpiCr 44 
                 d+ C+iCl+rp    +l CgH+ lC  C+ ++               r  +CpiC 
  KHJ30234.1 109 DSSCPICLSRPIVPRMLTCGHI-LCLPCLIRYVHsgdinvvipkkkaRWIECPICW 163
                 679*******************.********9878889999988776667899995 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.5   3.5e+03      17      27 ..      50      60 ..      40      62 .. 0.67
   2 !   19.4   2.5   4.3e-07   0.00095       2      36 ..     111     142 ..     110     145 .. 0.74
   3 !    6.7   0.1    0.0042       9.5       2      12 ..     158     168 ..     157     176 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.5
   zf-RING_2 17 lllpCgHvfhr 27
                ++  C+ +fh 
  KHJ30234.1 50 RRNSCNRSFHL 60
                3447*999*95 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 4.3e-07
   zf-RING_2   2 eCpICleelssadsvl.llpCgHvfhreClerwlrs 36 
                 +CpICl   s+   v+  l CgH+ +  Cl r+++s
  KHJ30234.1 111 SCPICL---SR-PIVPrMLTCGHILCLPCLIRYVHS 142
                 8****9...33.33441447**********998765 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0042
   zf-RING_2   2 eCpICleelss 12 
                 eCpIC+++++ 
  KHJ30234.1 158 ECPICWDSVNI 168
                 8*****99854 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   7.3   1.2e-07   0.00027       1      38 [.     112     159 ..     112     160 .. 0.67
   2 ?    1.5   0.1      0.14   3.2e+02       1       8 [.     159     166 ..     159     172 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 1.2e-07
  zf-RING_UBOX   1 CpIClelftdP.lvlpCGHtFCreCl.....w.....elskslegafkC 38 
                   CpICl+    P ++ +CGH++C +Cl            + k++ + + C
    KHJ30234.1 112 CPICLSRPIVPrML-TCGHILCLPCLiryvhSgdinvVIPKKKARWIEC 159
                   *****766689666.7**********76544134445555555555555 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.14
  zf-RING_UBOX   1 CpIClelf 8  
                   CpIC ++ 
    KHJ30234.1 159 CPICWDSV 166
                   ****9865 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   7.8   1.6e-05     0.035       1      33 [.     112     144 ..     112     162 .. 0.83
   2 ?   -0.3   0.2      0.56   1.3e+03       1       6 [.     159     164 ..     159     166 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.6e-05
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqkepd 33 
                 CPiCl+    P  l CGh+ Cl C+ ++ ++ d
  KHJ30234.1 112 CPICLSRPIVPRMLTCGHILCLPCLIRYVHSGD 144
                 *************************99887654 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.56
  zf-C3HC4_4   1 CPiCld 6  
                 CPiC d
  KHJ30234.1 159 CPICWD 164
                 ****87 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   1.8   3.6e-06    0.0081       2      33 ..     112     142 ..     111     145 .. 0.90
   2 ?    2.3   0.1     0.069   1.5e+02       1       9 [.     158     166 ..     158     171 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 3.6e-06
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLee 33 
                 CpiCl +   p ++  CgH  C  C+ r+ ++
  KHJ30234.1 112 CPICLSRPIVP-RMLTCGHILCLPCLIRYVHS 142
                 ********999.9999***********98665 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.069
  zf-C3HC4_2   1 kCpiCldml 9  
                 +CpiC d+ 
  KHJ30234.1 158 ECPICWDSV 166
                 699999975 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.2     0.011        24      29      39 ..     108     118 ..     106     121 .. 0.81
   2 ?   12.5   9.0   4.6e-05       0.1       1      40 [.     112     166 ..     112     171 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.011
  Prok-RING_4  29 dlssCPlCqrr 39 
                  + ssCP+C +r
   KHJ30234.1 108 QDSSCPICLSR 118
                  6689****765 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 4.6e-05
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCfdskdls...............sCPlCqrri 40 
                  C +C +++ ++++  CgH++C  C+    +s                CP+C   +
   KHJ30234.1 112 CPICLSRPIVPRMLTCGHILCLPCLIRYVHSgdinvvipkkkarwiECPICWDSV 166
                  99**********************9888666666688888889999999997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (623 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       964  (0.0537676); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 4442.34
//
Query:       KHJ30235.1  [L=519]
Description: putative glycoside hydrolase family 47 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   3.9e-142  474.4   0.0   4.4e-142  474.2   0.0    1.0  1  Glyco_hydro_47  Glycosyl hydrolase family 47


Domain annotation for each model (and alignments):
>> Glyco_hydro_47  Glycosyl hydrolase family 47
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  474.2   0.0  2.5e-146  4.4e-142       1     458 []      45     514 ..      45     514 .. 0.94

  Alignments for each domain:
  == domain 1  score: 474.2 bits;  conditional E-value: 2.5e-146
                     HHHHHHHHHHHHCTTSSEEETTTTEEE-SS.SS-CCHHHHHHHHHHCCHHHHHHHHHHHHHHC----S.SS.EEEHHHHHHHHHHHHHHHHHHH. CS
  Glyco_hydro_47   1 afkhswegYkkyAwghDelrPlskkgrdtfgglgatlvDsLdtllimglkeefeeaveavekkidfdtsdskevsvFEttIRyLGGLlsaydls. 94 
                     af+ +w+gY +yA+++Del P+s+++ ++ + +ga+ vD+L+t+l+m+  e ++++++++  +i+fd ++++evs+FEttIRyLGGLlsaydl  
      KHJ30235.1  45 AFRFAWNGYTQYAFPNDELLPVSNGFANSRNAWGASAVDGLSTALVMKIPEVVDQVLDFIP-TINFD-KTNTEVSLFETTIRYLGGLLSAYDLLs 137
                     699**********************************************************.*****.5888*********************99 PP

                     ..........S-HHHHHHHHHHHHHHHHGGGSSTTS---SEEETTT--EE-.STCGCEEEHHHHCSSHHHHHHHHHHHT-CHHHHHHHCCHHHHH CS
  Glyco_hydro_47  95 .........ekkedvllekAveladrLlpAFdtpsglpvarvnlkkrkaskkerassesvlAelgslslEftrLsqlTgdkkYedlaervtkale 180
                              ++  d++l++A++lad+L  AFdtpsg+pv+++n+k+r++ k++++     +A++gsl+lE+trLs+lTgd++Y+ l+++  ++l 
      KHJ30235.1 138 gplsdlgsnQTAVDLILKQATRLADNLAFAFDTPSGIPVNDLNFKNRTTDKSTTNG----IARVGSLVLEWTRLSDLTGDQRYATLSQKGQSYLL 228
                     ********9999********************************777655544444....6********************************** PP

                     CHC..C.HHHTTB-BSEEETTT--EESTEE-SSTTTHHHHHHHHHHHHHCTS--HHHHHHHHHHHHHHHHH.TEEE-TTT..--EEE-EECTTCT CS
  Glyco_hydro_47 181 elq..ektklpglvpikidastgkfvaekislgargDSyYEYllKqylllggeeeqyrkmyeealdaikkhllfrpskkkeddllfvgevtstee 273
                     + +  +++ +pglv++ ++++tg+f + + ++ +++DS+YEYl+K+y++  ++ ++yr+++  a+d++  hl+++ps++   +++f++ ++   +
      KHJ30235.1 229 SPKpaTSEPWPGLVGSVLNVETGEFLNAEGGWVGGSDSFYEYLIKMYAYDTSRFSSYRDRWVLAADSTIAHLASHPSSRP--EITFLAYYN---G 318
                     *99888889********************************************************************999..99****985...7 PP

                     S.EE-EEEGGGGHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHTSTTS---SEEEE-SS.......S-ECTSSSSEEE-....GGG--B--- CS
  Glyco_hydro_47 274 gklspeidhLscFlgGllalgakllekeedlelAkkltegcvkayeatktglmPEifevkpces..aeecewneekkdealk...riedrkyllR 363
                     +++++e +hL+cF gG+++ g+  l+++++++++ +l+++c+++y++t tg++PEif++  +++  +++ +   ++  ++ k    i+++ y lR
      KHJ30235.1 319 NQIDYESQHLACFDGGNFIFGGLVLNEQKYVDFGLELVNSCHETYTQTLTGIGPEIFRWVIDDKnnTNNPQIPVDQAGFYAKagfYITESAYNLR 413
                     78*********************99**********************************98776333444445555666665778899******* PP

                     -HHHHHHHHHHHHH--THHHHHHHHHHHHHHHHCEETTEE--ECETTSS.S-EE-S-B-HHHHHTHHHHHHHHC-S-TTT-.....TTTEEE-TT CS
  Glyco_hydro_47 364 PEaiESlfylYritgdekyrevgwemfealekatktesgysaledVtke.epekeDemeSFwlaEtlKYlYLlFsdedvls.....ldeyVfnTe 452
                     PE+iES++y+Yr+tgd+ky++++w++f+a++ +++t+sg++ l+dV++   + + D +eSF++aE+lKY YL++++e++ +      +++V+nTe
      KHJ30235.1 414 PEVIESFYYAYRATGDQKYQDWAWNAFKAINATCRTSSGFALLKDVNAPnGGGFGDFQESFFFAEVLKYSYLIHAPEEEWQvefggVNQWVYNTE 508
                     ***********************************************9967899*************************888899********** PP

                     S-EEE- CS
  Glyco_hydro_47 453 AHplkr 458
                     AHp+++
      KHJ30235.1 509 AHPFRV 514
                     ****85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (519 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3702.25
//
Query:       KHJ30236.1  [L=838]
Description: putative zw10 centromere kinetochore protein zw10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      0.004   17.8   2.9        3.4    8.4   0.1    4.1  4  Plasmid_parti  Putative plasmid partition protein
  ------ inclusion threshold ------
       0.44   11.0   4.3        9.8    6.6   0.0    3.5  3  RasGEF_N_2     Rapamycin-insensitive companion of mTOR RasGEF


Domain annotation for each model (and alignments):
>> Plasmid_parti  Putative plasmid partition protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0         1   9.3e+03      22      33 ..      78      89 ..      62     142 .. 0.50
   2 !    8.4   0.1   0.00038       3.4       3      39 ..     173     209 ..     172     225 .. 0.90
   3 ?    3.4   0.1     0.014   1.3e+02       3      50 ..     342     389 ..     340     408 .. 0.85
   4 ?    3.2   0.0     0.015   1.4e+02      15      38 ..     809     832 ..     798     837 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1
  Plasmid_parti 22 ienGiketlkkl 33
                   i++Gi++  k  
     KHJ30236.1 78 IQEGINQCHKLA 89
                   455665543322 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00038
  Plasmid_parti   3 kYLkiaeaieeGiieeekiienGiketlkklkkkesk 39 
                    +Y++i+++ie+   e +kii++G+ +  ++l + + k
     KHJ30236.1 173 RYIQIVRQIEQKYFELRKIIREGLLNLWENLVNVDRK 209
                    6**************************9999887654 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.014
  Plasmid_parti   3 kYLkiaeaieeGiieeekiienGiketlkklkkkeskkikkskqnkik 50 
                    +Y k  +++ e i+++e i   G++ +   +++  +  ++k + + ++
     KHJ30236.1 342 DYQKTLTEVGESIVDIESIGLLGFDGIRDWIENFPKIWLNKRRDKALE 389
                    6889999************************99998888888877666 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.015
  Plasmid_parti  15 iieeekiienGiketlkklkkkes 38 
                    +i+ +++++ G+++t+k+++++ +
     KHJ30236.1 809 LIRLSFVMNAGVRQTIKEIRDNPN 832
                    588899*************98865 PP

>> RasGEF_N_2  Rapamycin-insensitive companion of mTOR RasGEF_N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0    0.0011       9.8      55      90 ..      40      75 ..      27      78 .. 0.85
   2 ?    3.7   0.6    0.0086        77      19      64 ..      83     127 ..      76     149 .. 0.74
   3 ?   -1.9   0.0      0.47   4.3e+03      23      54 ..     319     352 ..     281     363 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0011
  RasGEF_N_2 55 igslLllkllstssGfkylqelnfveeeldkWiekk 90
                 g+l+ l +l+t+ + +  + +  + +e+d+W++++
  KHJ30236.1 40 SGALVALSTLKTEVETEISSISLEIADEVDDWMTHN 75
                57889999*******99666666**********997 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0086
  RasGEF_N_2  19 revvaaaleiLeeacddkeslevlvelkpslqhl.geigslLllkll 64 
                 ++  + a +i+++a ddk++le++ + +  l+ l +  ++++ + ll
  KHJ30236.1  83 NQCHKLAHDIVHHAEDDKQRLEEIQDKEMHLHALqK--ENTFSTDLL 127
                 66778999******************9999999933..333333333 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.47
  RasGEF_N_2  23 aaaleiLeeacddk..eslevlvelkpslqhlge 54 
                   +++iL e++d+   +++  +++++++l ++ge
  KHJ30236.1 319 ILSDRILREWLDHSvpTCILDVIDYQKTLTEVGE 352
                 4567889999877667888888888888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (838 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1154  (0.064365); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 5867.38
//
Query:       KHJ30237.1  [L=83]
Description: putative 60s ribosomal protein l38 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-32  111.4   4.1      2e-32  111.1   4.1    1.1  1  Ribosomal_L38e  Ribosomal L38e protein family


Domain annotation for each model (and alignments):
>> Ribosomal_L38e  Ribosomal L38e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.1   4.1   1.1e-36     2e-32       1      66 [.       2      68 ..       2      71 .. 0.96

  Alignments for each domain:
  == domain 1  score: 111.1 bits;  conditional E-value: 1.1e-36
  Ribosomal_L38e  1 PkeikdiKeFLeiarrkDaksvkikknk.kdntKfKvRcsryLYTLvvkdkekaeklkqsLppglkv 66
                    P+e +diK+F+ei+rrkDa+s++ik+nk +++tKfKvRc++yLYTLv+kd+ek+eklkqsLpp+l +
      KHJ30237.1  2 PRETSDIKQFIEICRRKDASSARIKRNKkSSQTKFKVRCQKYLYTLVLKDSEKVEKLKQSLPPNLVI 68
                    99***********************999899*********************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       897  (0.0500307); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 610.17
//
Query:       KHJ30238.1  [L=916]
Description: hypothetical protein EV44_g4736 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        6.9    6.5   8.1       0.37   10.6   1.6    2.0  2  DUF2427   Domain of unknown function (DUF2427)


Domain annotation for each model (and alignments):
>> DUF2427  Domain of unknown function (DUF2427)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.6     2e-05      0.37      17      44 ..     695     722 ..     684     728 .. 0.89
   2 ?   -1.6   0.6      0.13   2.4e+03      47      91 ..     741     783 ..     732     818 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 2e-05
     DUF2427  17 alwvHiilmtlalvvvyPvalvLslaks 44 
                 +l++Hi+l ++a++vv Pv l++++++ 
  KHJ30238.1 695 VLVLHILLAIVAFGVVIPVILIINSIRN 722
                 699*********************9986 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.13
     DUF2427  47 ylpvqivnlvlavlglllghiykgstPelypnniyaklswillil 91 
                  +++++v l  +++ l+ g+i +g ++ +   +i++ ++ +l ++
  KHJ30238.1 741 WILALVVLLPSTLIVLITGIISEGVKSHF--TSIHGITGLLLSLF 783
                 44455555555555555555555555444..45555555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (916 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 6465.03
//
Query:       KHJ30239.1  [L=228]
Description: hypothetical protein EV44_g3163 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0068   16.3   4.5        8.9    6.3   0.0    3.8  4  DUF1967         Domain of unknown function (DUF1967)
  ------ inclusion threshold ------
       0.12   12.0   6.1        2.1    8.1   0.5    3.2  3  DUF3146         Protein of unknown function (DUF3146)
       0.29   11.6   7.2        5.5    7.6   0.3    3.2  4  Ribosomal_L14e  Ribosomal protein L14
        5.7    6.7   8.4         19    5.0   4.9    2.3  2  DUF637          Possible hemagglutinin (DUF637)


Domain annotation for each model (and alignments):
>> DUF1967  Domain of unknown function (DUF1967)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.0     0.002       8.9      15      58 ..       4      47 ..       2      49 .. 0.89
   2 ?    3.5   0.0     0.016        70      18      50 ..      52      84 ..      49      92 .. 0.82
   3 ?    3.9   0.0     0.011        51      16      57 ..      68     109 ..      65     111 .. 0.84
   4 ?    3.4   0.8     0.016        74      19      52 ..     170     203 ..     162     217 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.002
                E-HHHHHHHTTEEE-TGGGHHHHHHHHHHTTHHHHHHTTT--TT CS
     DUF1967 15 eGekierlvkqtnfeneeavrrfarrLkklGvedaLrkaGakeG 58
                +++ i++ +++t f++  +   f++ +++ G+ + ++  G k++
  KHJ30239.1  4 NSTVIKKNINSTRFKKSINSTSFKKNINSSGIKKNINSTGNKKD 47
                56678999***************************999998765 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.016
                HHHHHHTTEEE-TGGGHHHHHHHHHHTTHHHHH CS
     DUF1967 18 kierlvkqtnfeneeavrrfarrLkklGvedaL 50
                + ++ +++t f+++ +   f++++++ G+ + +
  KHJ30239.1 52 RFKKSINSTSFKKNINSSGFKKIINSTGIKKNI 84
                677889999999999999999999999998876 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.011
                 -HHHHHHHTTEEE-TGGGHHHHHHHHHHTTHHHHHHTTT--T CS
     DUF1967  16 GekierlvkqtnfeneeavrrfarrLkklGvedaLrkaGake 57 
                 ++  ++++++t ++++ +  rf++ +++ G  + ++  G k+
  KHJ30239.1  68 SSGFKKIINSTGIKKNINSTRFKKNINSTGFKKNINSTGFKK 109
                 566789999999999999999999999999999999988875 PP

  == domain 4  score: 3.4 bits;  conditional E-value: 0.016
                 HHHHHTTEEE-TGGGHHHHHHHHHHTTHHHHHHT CS
     DUF1967  19 ierlvkqtnfeneeavrrfarrLkklGvedaLrk 52 
                 i+r +++t +++      ++r L++  ++ aLr+
  KHJ30239.1 170 IQRALRRTLIQRALRRTLIQRALRRTLIQRALRR 203
                 5555555555555555566666666666666654 PP

>> DUF3146  Protein of unknown function (DUF3146)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.4    0.0034        15      44      63 ..     162     181 ..     156     190 .. 0.60
   2 ?    8.1   0.5   0.00046       2.1      43      65 ..     188     210 ..     182     214 .. 0.88
   3 ?   -0.1   0.0      0.17   7.6e+02      43      55 ..     215     227 ..     211     228 .] 0.65

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0034
     DUF3146  44 ePslGraLikepLerflekk 63 
                 + +l r+Li+ +L r l ++
  KHJ30239.1 162 QRALRRTLIQRALRRTLIQR 181
                 55566666666666655543 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00046
     DUF3146  43 vePslGraLikepLerflekkDy 65 
                 ++ +l r+Li+ +L r l ++D 
  KHJ30239.1 188 IQRALRRTLIQRALRRILIQRDL 210
                 788999**************996 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.17
     DUF3146  43 vePslGraLikep 55 
                 ++ +l raLi+ +
  KHJ30239.1 215 IQRALRRALIQRS 227
                 5667777777765 PP

>> Ribosomal_L14e  Ribosomal protein L14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   1.5    0.0035        16      26      60 ..       6      40 ..       1      67 [. 0.58
   2 ?    7.6   0.3    0.0012       5.5      18      59 ..      61     102 ..      52     109 .. 0.75
   3 ?   -1.3   0.0      0.73   3.3e+03      30      33 ..     181     184 ..     160     214 .. 0.55
   4 ?   -3.0   0.0       2.5   1.1e+04      19      34 ..     206     221 ..     196     225 .. 0.68

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0035
  Ribosomal_L14e 26 gavkkawekadveekwaksawakklaarekraalt 60
                    +++kk +++   ++  +++++ k++++   +++ +
      KHJ30239.1  6 TVIKKNINSTRFKKSINSTSFKKNINSSGIKKNIN 40
                    55555555555555555555555555554444433 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0012
  Ribosomal_L14e  18 klprgartgavkkawekadveekwaksawakklaarekraal 59 
                     +++++ +++  kk +++ +++++ +++++ k++++   +++ 
      KHJ30239.1  61 SFKKNINSSGFKKIINSTGIKKNINSTRFKKNINSTGFKKNI 102
                     456777777788888888888888888888888877766665 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.73
  Ribosomal_L14e  30 kawe 33 
                     +a+ 
      KHJ30239.1 181 RALR 184
                     2222 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 2.5
  Ribosomal_L14e  19 lprgartgavkkawek 34 
                     ++r  r++ +++a+  
      KHJ30239.1 206 IQRDLRSTLIQRALRR 221
                     6667777777776655 PP

>> DUF637  Possible hemagglutinin (DUF637)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.6    0.0091        41      90     114 ..      10      34 ..       2      46 .. 0.73
   2 ?    5.0   4.9    0.0042        19      52     112 ..      34      95 ..      31     109 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0091
      DUF637  90 qsvisagvntainGGsfkdNlktal 114
                  ++ s+  ++ in +sfk N++++ 
  KHJ30239.1  10 KNINSTRFKKSINSTSFKKNINSSG 34 
                 56778888999*********98764 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0042
      DUF637  52 giddaslatsqdvaknavpqadastvsgvaqrlaaqlaqsvisa.gvntainGGsfkdNlkt 112
                 gi++++  t ++ ++n+++  +  +++++++++ ++    +i++ g+++ in + fk N+++
  KHJ30239.1  34 GIKKNINSTGNKKDNNSTRFKKSINSTSFKKNINSSGFKKIINStGIKKNINSTRFKKNINS 95 
                 5555555555666777777777788899999999999999996527************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       776  (0.0432818); expected 358.6 (0.02)
Passed bias filter:                      153  (0.00853366); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1769.09
//
Query:       KHJ30240.1  [L=223]
Description: putative peroxisomal membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-12   48.2   0.6      2e-12   47.5   0.6    1.3  1  Tim17     Tim17/Tim22/Tim23/Pmp24 family
  ------ inclusion threshold ------
      0.031   14.4   3.8       0.76    9.9   1.2    2.2  2  DUF5518   Family of unknown function (DUF5518)


Domain annotation for each model (and alignments):
>> Tim17  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.5   0.6   2.2e-16     2e-12      10     111 .]      25     140 ..      22     140 .. 0.85

  Alignments for each domain:
  == domain 1  score: 47.5 bits;  conditional E-value: 2.2e-16
       Tim17  10 vlGallGavfglvkgsrradtp......apskerlreglrsvgkrgpslGknfgvvgglysgiecaleklR...gkediwnsvaAGaltGal.l.r... 94 
                 +l++l+ a++g+v+g++ +++       +  + +lre+l +v+k++++++ n+++++++y+++  +l+++     k+  +++++AG+++G+l + r   
  KHJ30240.1  25 LLAVLKAARNGAVYGAKVRFPHalvitlLYRSGSLREKLSAVFKATRTHATNLATFAIIYKLTLLILKQFSsdpRKDGTYDTFIAGLIGGYLvFgRrta 123
                 57889999**********9986777655555556***********************************76443488889************6683477 PP

       Tim17  95 agpqaaavgaiggaafs 111
                 +g  ++++++i++ +f+
  KHJ30240.1 124 KGRVSSVSKQIVIFVFA 140
                 8999999****999996 PP

>> DUF5518  Family of unknown function (DUF5518)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1    0.0034        30      48      89 ..      30      81 ..      27      95 .. 0.58
   2 ?    9.9   1.2   8.5e-05      0.76      31      73 ..     106     145 ..      98     163 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0034
     DUF5518 48 dgavaGalaGligaipvlvlllvlll..........glvaaigglagfvall 89
                ++a++Ga+ G+ + +p ++++++l+           ++ a+ + ++ +++++
  KHJ30240.1 30 KAARNGAVYGAKVRFPHALVITLLYRsgslreklsaVFKATRTHATNLATFA 81
                689**************76666666556666544422222222222222222 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 8.5e-05
     DUF5518  31 llvgGlvaGylaggdskdgavaGalaGligaipvlvlllvlll 73 
                 ++++Gl+ Gyl+ g   + +  G ++ +   i+++v++ v l+
  KHJ30240.1 106 TFIAGLIGGYLVFG---RRTAKGRVSSVSKQIVIFVFARVCLS 145
                 69**********77...56778888888888888887777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1746.52
//
Query:       KHJ30241.1  [L=322]
Description: putative deoxyhypusine hydroxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.3e-28   97.2   4.3    1.5e-12   47.8   0.0    2.8  3  HEAT_2        HEAT repeats
      1e-17   62.9   0.1      0.017   15.7   0.0    5.8  6  HEAT_PBS      PBS lyase HEAT-like repeat
    3.8e-08   32.9   0.6        4.1    7.9   0.0    6.9  7  HEAT          HEAT repeat
    0.00071   20.0   1.4        2.8    8.5   0.0    4.8  5  HEAT_EZ       HEAT-like repeat
     0.0088   16.3   0.1       0.18   12.1   0.0    2.8  3  Cohesin_HEAT  HEAT repeat associated with sister chromatid co
  ------ inclusion threshold ------
      0.021   14.8   0.5         13    6.0   0.0    3.2  3  Arm           Armadillo/beta-catenin-like repeat
      0.057   13.3   0.0        0.8    9.6   0.0    2.4  2  DUF3385       Domain of unknown function (DUF3385)


Domain annotation for each model (and alignments):
>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   4.4e-07    0.0011      17      76 ..      31      94 ..      21      95 .. 0.84
   2 !   44.9   0.5   4.5e-15   1.2e-11       5      86 ..      54     138 ..      48     140 .. 0.86
   3 !   47.8   0.0   5.7e-16   1.5e-12       4      87 ..     217     301 ..     197     302 .. 0.92

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 4.4e-07
      HEAT_2 17 rraairaLgrignpea....lpaLvellededpavRraaaeaLgaigdpealpaLkellddddd 76
                r +a+ +L  i+ +e+    l+a+  + +++++   +++a  Lg+ ++ +a+p+L++ l+++++
  KHJ30241.1 31 RFRALFSLKHIAKTELslpaLEAIAAAFSSPSALLKHEVAYCLGQTKNIAAIPHLRAVLTNKNE 94
                7899*****998887663335555555599*****************************99876 PP

  == domain 2  score: 44.9 bits;  conditional E-value: 4.5e-15
      HEAT_2   5 lqalendpdpevrraairaLgrignpealpaLvell..ededpavRraaaeaLgaigdpealpaLkelldddd.ddvvReaAaea 86 
                 ++a+ ++p+  ++++++ +Lg+ +n  a+p L+ +l  ++ed++ R++aaea+gaigd + l++L++  d +d d+vvRe  ++a
  KHJ30241.1  54 IAAAFSSPSALLKHEVAYCLGQTKNIAAIPHLRAVLtnKNEDAMCRHEAAEAMGAIGDIDCLDVLTKFRDAEDeDRVVRETCEIA 138
                 3344479*****************************6667999************************998776268999987776 PP

  == domain 3  score: 47.8 bits;  conditional E-value: 5.7e-16
      HEAT_2   4 LlqalendpdpevrraairaLgrignpealpaLvelled..edpavRraaaeaLgaigd.pealpaLkellddddddvvReaAaeaL 87 
                 L + l +dp+   r++++ + g++g+p ++paL+  l++  e ++vR++aaeaLg +gd p + ++Lk+ + +d+d++vRe+++ aL
  KHJ30241.1 217 LAKGL-SDPSALFRHEIAFVFGQLGHPASIPALTATLSNmnEVSMVRHEAAEALGSLGDqPGVKEILKKFF-NDKDQIVRESIIVAL 301
                 67888.9******************************87335689*************88*********99.5799******99887 PP

>> HEAT_PBS  PBS lyase HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1       2.2   5.7e+03       4      22 ..      33      55 ..      31      59 .. 0.50
   2 !   10.9   0.0   0.00025      0.63       3      25 ..      67      89 ..      65      91 .. 0.91
   3 !   15.7   0.0   6.8e-06     0.017       2      23 ..      99     120 ..      99     122 .. 0.94
   4 ?   -1.3   0.0         2   5.2e+03       2      15 ..     191     209 ..     191     219 .. 0.69
   5 !   13.2   0.0   4.4e-05      0.11       2      25 ..     229     252 ..     228     254 .. 0.91
   6 !   15.0   0.0   1.1e-05     0.029       1      18 [.     261     278 ..     261     288 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 2.2
                HHHHHHHHCTS....GGGHHHHH CS
    HEAT_PBS  4 aAakaLgqlgd....eeaipaLl 22
                +A+++L  +        a++a+ 
  KHJ30241.1 33 RALFSLKHIAKtelsLPALEAIA 55
                55555555555544434444444 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00025
                HHHHHHHHHCTSGGGHHHHHHHC CS
    HEAT_PBS  3 raAakaLgqlgdeeaipaLleaL 25
                ++ a+ Lgq +  +aip+L+++L
  KHJ30241.1 67 HEVAYCLGQTKNIAAIPHLRAVL 89
                789******************99 PP

  == domain 3  score: 15.7 bits;  conditional E-value: 6.8e-06
                 HHHHHHHHHHCTSGGGHHHHHH CS
    HEAT_PBS   2 RraAakaLgqlgdeeaipaLle 23 
                 R++Aa+a+g++gd +++++L +
  KHJ30241.1  99 RHEAAEAMGAIGDIDCLDVLTK 120
                 9******************976 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 2
                 HHHHHHHHHHCTS.....G CS
    HEAT_PBS   2 RraAakaLgqlgd.....e 15 
                 R++ +++L  l +     +
  KHJ30241.1 191 RYRSMFSLRDLASssrssT 209
                 8999999998887554444 PP

  == domain 5  score: 13.2 bits;  conditional E-value: 4.4e-05
                 HHHHHHHHHHCTSGGGHHHHHHHC CS
    HEAT_PBS   2 RraAakaLgqlgdeeaipaLleaL 25 
                 R++ a+  gqlg++++ipaL + L
  KHJ30241.1 229 RHEIAFVFGQLGHPASIPALTATL 252
                 99******************9876 PP

  == domain 6  score: 15.0 bits;  conditional E-value: 1.1e-05
                 HHHHHHHHHHHCTSGGGH CS
    HEAT_PBS   1 vRraAakaLgqlgdeeai 18 
                 vR++Aa+aLg lgd+  +
  KHJ30241.1 261 VRHEAAEALGSLGDQPGV 278
                 9*************5443 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0       0.6   1.5e+03      12      29 ..      26      43 ..      17      44 .. 0.76
   2 ?    1.6   0.0      0.17   4.4e+02       2      26 ..      51      75 ..      50      75 .. 0.87
   3 ?    4.1   0.0     0.027        70       6      28 ..      89     110 ..      82     112 .. 0.75
   4 ?    0.6   0.0      0.36   9.2e+02      10      20 ..     125     135 ..     117     143 .. 0.78
   5 ?    4.7   0.0     0.017        45       5      27 ..     217     239 ..     214     241 .. 0.91
   6 !    7.9   0.0    0.0016       4.1       9      28 ..     252     273 ..     245     275 .. 0.74
   7 ?    3.1   0.0     0.055   1.4e+02       5      24 ..     282     301 ..     279     302 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.6
                SSHHHHHHHHHHHHHHHH CS
        HEAT 12 pspeVReaAakaLgalae 29
                +s   R  A+ +L ++a+
  KHJ30241.1 26 ESLPKRFRALFSLKHIAK 43
                56667999******9997 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.17
                HHHHHHHHT-SSHHHHHHHHHHHHH CS
        HEAT  2 lPlllkllsDpspeVReaAakaLga 26
                l ++  + s+ps+     +a++Lg+
  KHJ30241.1 51 LEAIAAAFSSPSALLKHEVAYCLGQ 75
                5678888999999999*******97 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.027
                 HHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   6 lkllsDpspeVReaAakaLgala 28 
                 l++ + +++  R  Aa+a+ga+ 
  KHJ30241.1  89 LTN-KNEDAMCRHEAAEAMGAIG 110
                 333.5599999**********96 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.36
                 T-SSHHHHHHH CS
        HEAT  10 sDpspeVReaA 20 
                 +D++  VRe++
  KHJ30241.1 125 EDEDRVVRETC 135
                 79999****98 PP

  == domain 5  score: 4.7 bits;  conditional E-value: 0.017
                 HHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgal 27 
                 l k lsDps+  R   a  +g+l
  KHJ30241.1 217 LAKGLSDPSALFRHEIAFVFGQL 239
                 7899****************998 PP

  == domain 6  score: 7.9 bits;  conditional E-value: 0.0016
                 HT-..SSHHHHHHHHHHHHHHH CS
        HEAT   9 lsD..pspeVReaAakaLgala 28 
                 ls   + + VR  Aa+aLg l 
  KHJ30241.1 252 LSNmnEVSMVRHEAAEALGSLG 273
                 444448999**********986 PP

  == domain 7  score: 3.1 bits;  conditional E-value: 0.055
                 HHHHHT-SSHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaL 24 
                 l k  +D++  VRe+ + aL
  KHJ30241.1 282 LKKFFNDKDQIVRESIIVAL 301
                 55667*********987665 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.19   4.7e+02      25      54 ..      50      75 ..      30      75 .. 0.68
   2 ?    1.9   0.0      0.13   3.3e+02      29      55 .]      81     109 ..      80     109 .. 0.80
   3 ?    0.1   0.0      0.48   1.2e+03      29      54 ..     213     238 ..     207     239 .. 0.77
   4 !    8.0   0.0    0.0016         4      24      55 .]     239     272 ..     235     272 .. 0.81
   5 !    8.5   0.0    0.0011       2.8       2      52 ..     260     301 ..     259     301 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.19
     HEAT_EZ 25 lvpeilpaLlalLnddsdeVRaaAagaLgn 54
                +++    a +a+ +++s++ +  +a++Lg+
  KHJ30241.1 50 ALE----AIAAAFSSPSALLKHEVAYCLGQ 75
                333....33455566666889999999997 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.13
     HEAT_EZ  29 ilpaLlalLnddsd.eV.RaaAagaLgnl 55 
                 ++p L a L++++  +  R  Aa a g++
  KHJ30241.1  81 AIPHLRAVLTNKNEdAMcRHEAAEAMGAI 109
                 79999999999888455899999998875 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.48
     HEAT_EZ  29 ilpaLlalLnddsdeVRaaAagaLgn 54 
                 ++  L+++L+d+s++ R   a  +g+
  KHJ30241.1 213 AVLSLAKGLSDPSALFRHEIAFVFGQ 238
                 5778999**99998877777766666 PP

  == domain 4  score: 8.0 bits;  conditional E-value: 0.0016
     HEAT_EZ  24 plvpeilpaLlalLnddsd..eVRaaAagaLgnl 55 
                 + +p+ +paL a+L++ +   +VR  Aa aLg l
  KHJ30241.1 239 LGHPASIPALTATLSNMNEvsMVRHEAAEALGSL 272
                 5678999*******884444599********986 PP

  == domain 5  score: 8.5 bits;  conditional E-value: 0.0011
     HEAT_EZ   2 rvRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaL 52 
                  vR+ Aa aLG+l       +qp v+eil+ +    nd+++ VR+  + aL
  KHJ30241.1 260 MVRHEAAEALGSLG------DQPGVKEILKKFF---NDKDQIVRESIIVAL 301
                 69********9555......999999******9...777778899887776 PP

>> Cohesin_HEAT  HEAT repeat associated with sister chromatid cohesion
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       3.3   8.4e+03      28      37 ..     125     134 ..     124     135 .. 0.80
   2 ?    0.3   0.0      0.35   8.9e+02      22      32 ..     216     226 ..     215     229 .. 0.86
   3 !   12.1   0.0     7e-05      0.18       8      39 ..     267     298 ..     266     299 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 3.3
                   HSS-HHHHHH CS
  Cohesin_HEAT  28 tDsspsVRdA 37 
                   +D++ +VR++
    KHJ30241.1 125 EDEDRVVRET 134
                   788899**97 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.35
                   HHHHHHHSS-H CS
  Cohesin_HEAT  22 tiarrltDssp 32 
                   ++a+ l+D+s+
    KHJ30241.1 216 SLAKGLSDPSA 226
                   58999*****8 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 7e-05
                   HH-GGGGGSHHHHHHHHHHHHSS-HHHHHHHH CS
  Cohesin_HEAT   8 ekdpsiLsapevldtiarrltDsspsVRdAaL 39 
                   e+  s+ ++p v++++++ ++D + +VR++++
    KHJ30241.1 267 EALGSLGDQPGVKEILKKFFNDKDQIVRESII 298
                   6667899**********************986 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       2.6   6.6e+03      17      36 ..      54      73 ..      48      74 .. 0.65
   2 ?    6.0   0.0    0.0051        13      13      36 ..      81     106 ..      79     109 .. 0.92
   3 ?    5.6   0.0    0.0069        18      14      39 ..     245     272 ..     244     274 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2.6
                HHHHTTTSSHHHHHHHHHHH CS
         Arm 17 LvrLLssedeevqeeAawAL 36
                  +  ss++  +++e+a +L
  KHJ30241.1 54 IAAAFSSPSALLKHEVAYCL 73
                44455688888888888777 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0051
                 HHHHHHHHTT..TSSHHHHHHHHHHH CS
         Arm  13 avppLvrLLs..sedeevqeeAawAL 36 
                 a+p+L + L+  +ed + ++eAa A+
  KHJ30241.1  81 AIPHLRAVLTnkNEDAMCRHEAAEAM 106
                 79********************9887 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.0069
                 HHHHHHHTT..TSSHHHHHHHHHHHHHH CS
         Arm  14 vppLvrLLs..sedeevqeeAawALsNL 39 
                 +p+L + Ls  +e  +v++eAa AL+ L
  KHJ30241.1 245 IPALTATLSnmNEVSMVRHEAAEALGSL 272
                 89999999999**************987 PP

>> DUF3385  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00031       0.8      16     101 ..      86     227 ..      82     258 .. 0.60
   2 ?    1.0   0.0      0.13   3.4e+02      10      39 ..     243     273 ..     234     310 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00031
     DUF3385  16 lnilkte.qsqsirrevikllGilGALDPykh..................................................kqveeraedkkrreeaa 63 
                   +l ++ ++   r e++  +G +G +D   +                                                  k++  +           
  KHJ30241.1  86 RAVLTNKnEDAMCRHEAAEAMGAIGDIDCLDVltkfrdaededrvvretceiaverilweqkdacnekfrnskftsidpapsKNNDDS----------I 174
                 5667777468999****************99977777777777777777777777776666666655554443333333333333222..........2 PP

     DUF3385  64 retdlsllmvgl...............spsneeyyptvvinaLlrilkdpsls 101
                 ++ + +ll+++l                +s+    +t ++ +L++ l+dps  
  KHJ30241.1 175 EHLEQELLSQKLplfrryrsmfslrdlASSSRSSTATLAVLSLAKGLSDPSAL 227
                 22222222111122222222222233266667777777777777777777755 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.13
     DUF3385  10 qLLelLlnilkte.qsqsirrevikllGilG 39 
                   +  L+  l +  +   +r e++  lG lG
  KHJ30241.1 243 ASIPALTATLSNMnEVSMVRHEAAEALGSLG 273
                 5566778888887458889*********999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2432.00
//
Query:       KHJ30242.1  [L=236]
Description: hypothetical protein EV44_g3325 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-37  129.3   0.0      2e-37  129.2   0.0    1.0  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.2   0.0   1.1e-41     2e-37       1     227 [.      12     235 ..      12     236 .] 0.92

  Alignments for each domain:
  == domain 1  score: 129.2 bits;  conditional E-value: 1.1e-41
       RVT_2   1 ktyrlvslPkdrkaigsrWvftkkkddl.kevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaaeeelvvhqldvdsafLnaeldeevyvk 98 
                 +t++ v+     ++i+ +Wv+t k+d+     k+kar+ ++G  q  +   +e++a  + l++ rLl+al a  ++   q d   af n+ lde++y+ 
  KHJ30242.1  12 NTFEQVKQTDSMHPIPLKWVYTYKIDESgYLIKFKARICVRGDLQPKND--EETYACTLALQVFRLLMALVALFDFETIQADAVNAFCNSPLDEDIYLY 108
                 68999********************9998899************98876..59********************************************** PP

       RVT_2  99 qPpGfeidreeekvykLnkslyGlkqapllWnekidkvLkklgferseaesGlyvrgtgegklivalyvddllia..gsdikiledvkkelakkfklkd 195
                 +P Gf+ +   + v +L ++lyGl+++  +W++ ++ +L ++g+  ++++  +++ +   + +i+  +vddl++a  +++ +  +++ k+l++k++++ 
  KHJ30242.1 109 NPSGFNKN---GFVLRLLRGLYGLRKSLKMWFKLLSGTLSDIGLYSIPGQPCIFTDY---QGIIIFFFVDDLVVAfpADKRSKAHNYLKKLTQKYEFRI 201
                 *****988...9*******************************************99...459***********9333344456677889********* PP

       RVT_2 196 lgkvskfLGieiaq..eaggiklsladyiakvvk 227
                 lg+++ f+G++i++  ++ ++ ls+++yi+k+ +
  KHJ30242.1 202 LGELEWFVGVKITRdgSNKKLFLSQEAYIEKICR 235
                 *************9556677889********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1793.38
//
Query:       KHJ30243.1  [L=123]
Description: putative krab-a domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 926.30
//
Query:       KHJ30244.1  [L=615]
Description: putative exosome complex exonuclease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-42  144.9   0.2      3e-42  144.3   0.2    1.3  1  DNA_pol_A_exo1  3'-5' exonuclease
    5.3e-27   94.3   3.4    5.7e-27   94.2   1.4    2.2  2  PMC2NT          PMC2NT (NUC016) domain
    8.8e-14   51.2   0.0    1.8e-13   50.2   0.0    1.6  1  HRDC            HRDC domain
  ------ inclusion threshold ------
      0.044   13.8   0.4       0.86    9.6   0.0    2.3  2  Rsd_AlgQ        Regulator of RNA polymerase sigma(70) subunit


Domain annotation for each model (and alignments):
>> DNA_pol_A_exo1  3'-5' exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.3   0.2   6.8e-46     3e-42       3     175 ..     230     396 ..     228     397 .. 0.98

  Alignments for each domain:
  == domain 1  score: 144.3 bits;  conditional E-value: 6.8e-46
                     EEHSHHHHHHHHHHHTTSSEEEEEEEEE-SSSTTSSEEEEEEEEECSSEEEEEECTTTTTT-HGHHHHHHHT-TTSEEEESSHHHHHHHHHHHHT CS
  DNA_pol_A_exo1   3 ivtdeeeleelieelknlkvvavDtEttsldlisatlvliliqlgekeeayiidplelgddvalealkrlledenitkvghnakfDlevlardfg 97 
                      v++ee++ e++e lkn+k++avD E++  ++  +t+ l l+q++++++++i+d+l+      le l+++++d+ i kv+h+a +D+ +l+rd g
      KHJ30244.1 230 FVDTEEKVIEMLEDLKNSKEIAVDIEHHEARS--YTGLLSLMQISNRTKDWIVDTLKPWRH-KLEVLNEVFADPRIVKVFHGAFMDVIWLQRDLG 321
                     799*****************************..**********************98775.8******************************** PP

                     S--SSEEEHHHHHHHTTHSTTSSHHHHHHHHHSB---GHCCTTSSTTTSSS-HHHHHHHHHHHHHTHHHHHHHHHHHH CS
  DNA_pol_A_exo1  98 ielenlfdtmlaayvldyershsLdsLaekylgdleldkeeqiakwqkarplleeqllYAaeDadvllrlfkkLtkel 175
                      ++ +lfdt+ a +vl+y+   sL+ L++k+++ ++ dk +q+a+w+  rpl+e++l YA++D+++ll++++++++el
      KHJ30244.1 322 LYITGLFDTYRACQVLGYPA-GSLAFLLKKFIN-FDADKAYQMADWR-IRPLPEKMLYYARADTHYLLYIYDQMRNEL 396
                     ********************.9***********.*************.***************************997 PP

>> PMC2NT  PMC2NT (NUC016) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.2   1.4   1.3e-30   5.7e-27       3      92 .]      21     109 ..      19     109 .. 0.97
   2 ?   -2.4   0.0       1.8   8.1e+03      38      67 ..     134     170 ..     118     182 .. 0.62

  Alignments for each domain:
  == domain 1  score: 94.2 bits;  conditional E-value: 1.3e-30
      PMC2NT   3 atraanaLpaeDldfyrsldpefaksldeqserllslinsllklaaskseisassklededdveekfksvvdvvDsllEkadtcLDeltg 92 
                  tr++ ++ aeDl+f+rsl++e+++ ldeqserllsl+++l+k+aas s+ ++ + led++dve++++svvdvvDsllEk+d+cLDe+tg
  KHJ30244.1  21 ITRTVGRITAEDLTFQRSLNREVRTVLDEQSERLLSLASALIKSAASISDLRS-PILEDVEDVENNWRSVVDVVDSLLEKSDSCLDEYTG 109
                 69*************************************************88.5*********************************98 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.8
      PMC2NT  38 slinsllklaaskseisassklededd.......vee 67 
                 s++++ l+ ++  + + a++k+ d dd       +++
  KHJ30244.1 134 SVLDQNLRTQNIVKPQLAFEKKPDNDDktpwkpfITT 170
                 5556666666666666666788888884444444445 PP

>> HRDC  HRDC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.0     4e-17   1.8e-13       1      68 []     456     523 ..     456     523 .. 0.98

  Alignments for each domain:
  == domain 1  score: 50.2 bits;  conditional E-value: 4e-17
                 HHHHHHHHHHHHHHHHHHHTS-HHHHS-HHHHHHHHHH---SHHHHHTSTTT-HHHHHHHHHHHHHHH CS
        HRDC   1 qlallkaLrewReelAreedvppyvvfpdktLleiAeklPttleeLlqiegvgkrklekygeeileai 68 
                 q+a+++a ++wR+++Ar  d +p++++p++tL +iA+ +Pt+l +Ll+     ++ ++   +e+le+i
  KHJ30244.1 456 QFAVFRAVHAWRDKIARIDDDSPSFLMPNHTLFSIAKIMPTDLLSLLRTAHPVSYGVKSRVDELLEII 523
                 689***************************************************************98 PP

>> Rsd_AlgQ  Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00019      0.86       2      43 ..      76     117 ..      75     133 .. 0.81
   2 ?    1.7   0.1     0.049   2.2e+02      71     110 ..     387     426 ..     355     435 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00019
    Rsd_AlgQ   2 leklekakerwggvselidrwLeeRqqllvaycklaglkpkk 43 
                 le++e+++++w+ v +++d++Le+  + l +y+ l + + ++
  KHJ30244.1  76 LEDVEDVENNWRSVVDVVDSLLEKSDSCLDEYTGLIKRNDTA 117
                 8999******************************98764422 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.049
    Rsd_AlgQ  71 evYeqlveeaeefgdkelelakelypkieatTeaaldfnd 110
                  +Y+q+ +e+ e++++e++  + + + ++++ e+ l+ ++
  KHJ30244.1 387 YIYDQMRNELVEKSSHENAKENLIDAVLQKSKETSLSRYE 426
                 5899999999999999988888888888888888776555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (615 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       722  (0.04027); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4240.90
//
Query:       KHJ30245.1  [L=95]
Description: putative tp53-regulated inhibitor of apoptosis 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.6e-26   91.7   1.6    3.4e-26   91.3   1.6    1.2  1  UPF0203    Uncharacterised protein family (UPF0203)
    6.4e-05   23.2   0.5    0.00013   22.2   0.5    1.4  1  COX17      Cytochrome C oxidase copper chaperone (COX17)
  ------ inclusion threshold ------
      0.018   15.0   3.6       0.11   12.5   0.2    2.3  2  Cmc1       Cytochrome c oxidase biogenesis protein Cmc1 like
      0.023   14.4   1.5        3.7    7.3   0.1    2.3  2  NDUF_B7    NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7
      0.025   14.8   1.5        3.3    8.0   0.0    2.2  2  UCR_hinge  Ubiquinol-cytochrome C reductase hinge protein
       0.13   12.7   0.3       0.75   10.3   0.1    1.9  2  Mvb12      ESCRT-I subunit Mvb12


Domain annotation for each model (and alignments):
>> UPF0203  Uncharacterised protein family (UPF0203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.3   1.6   1.1e-29   3.4e-26       1      68 [.       3      70 ..       3      71 .. 0.97

  Alignments for each domain:
  == domain 1  score: 91.3 bits;  conditional E-value: 1.1e-29
     UPF0203  1 sslspeCtelKeaYdeCFnkWfsekflkgkekeeeCeklwkkYreClkkalkekgleklleeareeap 68
                +sl+p+C+e+Ke+Yd+CF kW+sek+l+g+  +++C+ l+++Y++Cl++ lk++g++k+l+ are+++
  KHJ30245.1  3 ASLAPQCNESKERYDSCFLKWYSEKYLRGSVMKDDCAPLFEEYKACLSNILKDRGIDKMLDSAREDHK 70
                599**************************************************************986 PP

>> COX17  Cytochrome C oxidase copper chaperone (COX17)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.5   4.4e-08   0.00013       9      43 ..       9      51 ..       7      52 .. 0.86

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 4.4e-08
       COX17  9 CpetKkaRDeCilesgaeee........kCkelieahkaCmrs 43
                C e K+  D+C+l+  +e+         +C+ l e++kaC+ +
  KHJ30245.1  9 CNESKERYDSCFLKWYSEKYlrgsvmkdDCAPLFEEYKACLSN 51
                **************96555566777778************975 PP

>> Cmc1  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   3.6e-05      0.11      30      55 ..       4      29 ..       2      35 .. 0.90
   2 ?    3.0   0.1     0.034     1e+02      11      25 ..      36      50 ..      32      55 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.6e-05
        Cmc1 30 kvvgkCneekeamkkClkeyrtderl 55
                + +++Cne ke  + C  +++ +++l
  KHJ30245.1  4 SLAPQCNESKERYDSCFLKWYSEKYL 29
                67899******************998 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.034
        Cmc1 11 keCaelikalaeChk 25
                + Ca l ++++ C +
  KHJ30245.1 36 DDCAPLFEEYKACLS 50
                678888888888865 PP

>> NDUF_B7  NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.2    0.0022       6.7      37      54 ..       5      22 ..       2      31 .. 0.78
   2 ?    7.3   0.1    0.0013       3.7      17      32 ..      35      50 ..      32      77 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0022
     NDUF_B7 37 lpwkCehekhayekCqye 54
                l  +C++ k+ y++C  +
  KHJ30245.1  5 LAPQCNESKERYDSCFLK 22
                5679***********554 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0013
     NDUF_B7 17 RDyCAhlLiplnkCrr 32
                +D CA l+ +++ C +
  KHJ30245.1 35 KDDCAPLFEEYKACLS 50
                69************86 PP

>> UCR_hinge  Ubiquinol-cytochrome C reductase hinge protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.4    0.0044        13      13      26 ..       6      19 ..       2      28 .. 0.86
   2 ?    8.0   0.0    0.0011       3.3      12      33 ..      34      55 ..      25      74 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0044
   UCR_hinge 13 kekCkklkkhyeeC 26
                +++C++ k++y+ C
  KHJ30245.1  6 APQCNESKERYDSC 19
                79************ PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0011
   UCR_hinge 12 ekekCkklkkhyeeCveRVksr 33
                 k +C++l ++y++C   + ++
  KHJ30245.1 34 MKDDCAPLFEEYKACLSNILKD 55
                5789***********9887766 PP

>> Mvb12  ESCRT-I subunit Mvb12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   0.00025      0.75      51      73 ..       7      30 ..       2      33 .. 0.72
   2 ?    0.6   0.0      0.26   7.9e+02      49      71 ..      58      80 ..      39      84 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00025
                HHHHHH.HTHHHHHHHHHHHHS-- CS
       Mvb12 51 ealekh.dksgeeFdkWYkekyLs 73
                 ++++  ++    F kWY+ekyL+
  KHJ30245.1  7 PQCNESkERYDSCFLKWYSEKYLR 30
                566665144556799*******97 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.26
                HHHHHHHHHTHHHHHHHHHHHHS CS
       Mvb12 49 lvealekhdksgeeFdkWYkeky 71
                + + l+++++ ++e d+ Yk+k+
  KHJ30245.1 58 IDKMLDSAREDHKENDTLYKQKF 80
                55666777777888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 697.63
//
Query:       KHJ30246.1  [L=263]
Description: putative mitochondrial inner membrane protein 1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.9e-42  144.0   7.2    4.6e-42  143.7   7.2    1.1  1  DUF3429         Protein of unknown function (DUF3429)
  ------ inclusion threshold ------
       0.14   11.3   5.1       0.17   11.0   5.1    1.1  1  Astro_capsid_p  Turkey astrovirus capsid protein
       0.35    9.7   2.9       0.43    9.4   2.9    1.1  1  Med12-LCEWAV    Eukaryotic Mediator 12 subunit domain


Domain annotation for each model (and alignments):
>> DUF3429  Protein of unknown function (DUF3429)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.7   7.2   7.7e-46   4.6e-42       1     143 [.      27     184 ..      27     185 .. 0.94

  Alignments for each domain:
  == domain 1  score: 143.7 bits;  conditional E-value: 7.7e-46
     DUF3429   1 vpklalvlGlaGliPfvalallt................laislllaeellstlaaaqlaYgavilSFlGGvhWgla.leeegaakakrtrlalsvvps 82 
                 vp+ +l++G+aG++P++a++++t                +++s + a++ll++++++q++Yga+i+SFlG+vhWgl+ +  +g+ ++ ++rl ++v+++
  KHJ30246.1  27 VPRDSLYIGAAGILPYAATSCSTiyiawdinyaeengvgYLLSPESAHQLLNIITPIQIGYGAIIISFLGAVHWGLEyAGFGGR-HS-YRRLKYGVIAP 123
                 7999***********************************9999**********************************5555555.44.89********* PP

     DUF3429  83 llawlalllpseaalallilgflllllvDrraaragwlpswylklRfvltavvvlsllltl 143
                 ++aw++ll+p e+al+  +l+f  +++vD+ra+ +gw+p+wy+ +Rfvlt+ v++s++++l
  KHJ30246.1 124 IIAWPTLLMPVETALISQFLAFNYMYFVDARATAEGWFPPWYSIYRFVLTFFVGASIVVSL 184
                 **********8777777777***************************************98 PP

>> Astro_capsid_p  Turkey astrovirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   5.1   2.9e-05      0.17     188     280 ..     167     259 ..     163     263 .] 0.69

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 2.9e-05
                     --TTTTTSSS---TT-EEEEEEESS--XXXX....XXXX......XXXXXXXXXXXXXXXXX.XXXXXXXX.XXXXXXXXXXXXXXX..XXXXXX CS
  Astro_capsid_p 188 adqvllhlitpppqavqllfemkttvpqeralaegederktgaeeeisdpsdeedeevsdee.tdtevesd.eDeddevdrfDletsyeSeaeDd 280
                     + +++l ++++    v l+ + +++ p++++l + +++ + g e ++++ ++ee  + +++e +d+e es+ eDe+ e+++  +  + +S++e +
      KHJ30246.1 167 IYRFVLTFFVGASIVVSLISRGQIERPEQQQLKTLKEQANAGREAQFVNLESEEIMRREEQEmEDEEGESNgEDEESEINKETE--EIDSNEEEE 259
                     5667888899999999999999**************************999999844443330344444444666666655433..333444433 PP

>> Med12-LCEWAV  Eukaryotic Mediator 12 subunit domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   2.9   7.1e-05      0.43     346     422 ..     182     261 ..     175     263 .] 0.66

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 7.1e-05
  Med12-LCEWAV 346 ctLiSRGdlasessatlnkp.akspaeeseeeveekeeelvseidlkakklee..keelddskidddldkllqhikeeqq 422
                    +LiSRG+++  ++++l+   ++++a++ ++ v+ ++ee++ + + +++ +e   + e ++s+i+++++ +  + +ee++
    KHJ30246.1 182 VSLISRGQIERPEQQQLKTLkEQANAGREAQFVNLESEEIMRREEQEMEDEEGesNGEDEESEINKETEEIDSNEEEENK 261
                   68*******98877765333367777788887888888877766555554443114444588999998887555444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1632  (0.0910257); expected 358.6 (0.02)
Passed bias filter:                      721  (0.0402142); expected 358.6 (0.02)
Passed Vit filter:                        96  (0.00535445); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 1928.72
//
Query:       KHJ30247.1  [L=272]
Description: putative mpv17 pmp22 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.3e-21   74.0   0.1    1.9e-20   72.8   0.1    1.7  1  Mpv17_PMP22  Mpv17 / PMP22 family


Domain annotation for each model (and alignments):
>> Mpv17_PMP22  Mpv17 / PMP22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.8   0.1   1.1e-24   1.9e-20       2      62 .]     190     250 ..     189     250 .. 0.97

  Alignments for each domain:
  == domain 1  score: 72.8 bits;  conditional E-value: 1.1e-24
  Mpv17_PMP22   2 llegksleeikeelkekfwptlkanwkvWppaqlinFyfvPlkfRvlfvnvvslgWntyLS 62 
                  + eg  +  + ++l++ ++ptlkan++vWp++q++nF+++P++f+++fv++++++W++yLS
   KHJ30247.1 190 IAEGGGRRAVSTKLRDMYIPTLKANYVVWPLVQMVNFRLMPVQFQLPFVSTIGIAWTAYLS 250
                  67999999****************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       323  (0.0180155); expected 358.6 (0.02)
Passed bias filter:                      249  (0.0138881); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 2227.61
//
Query:       KHJ30248.1  [L=350]
Description: putative integral membrane protein duf125 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2583.75
//
Query:       KHJ30249.1  [L=202]
Description: hypothetical protein EV44_g3411 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       425  (0.0237046); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1495.97
//
Query:       KHJ30250.1  [L=315]
Description: hypothetical protein EV44_g3954 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2414.83
//
Query:       KHJ30251.1  [L=555]
Description: putative mfs general substrate transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.2e-30  103.7  26.5    4.3e-26   91.7   2.3    2.1  2  MFS_1       Major Facilitator Superfamily
    2.6e-09   36.5   7.4    2.6e-09   36.5   7.4    2.6  2  Sugar_tr    Sugar (and other) transporter
     0.0017   17.3   3.6     0.0017   17.3   3.6    2.8  3  MFS_1_like  MFS_1 like family


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.7   2.3   7.2e-30   4.3e-26      23     237 ..      44     316 ..      20     337 .. 0.77
   2 !   15.3  19.4   1.2e-06    0.0072      27     174 ..     338     497 ..     319     523 .. 0.78

  Alignments for each domain:
  == domain 1  score: 91.7 bits;  conditional E-value: 7.2e-30
       MFS_1  23 laedlg.....ispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlgagalfpagaaliadwfpk 116
                 l + +g      +    gll+++++l+ a++ +++G+lsd++Gr+++ll+g ++++l+ll+   a+++w+ l++r+l G+   + ++++++++ ++++ 
  KHJ30251.1  44 LVKRFGvgdekHASFYSGLLISAFSLAEALTGMFWGSLSDKVGRKPILLCGCAGTILSLLIVGTAQNFWVALAGRALGGILN-GNIAVIQTVVGELVTC 141
                 4444443333224445799***************************************44444459***************6.7777777777777765 PP

       MFS_1 117 .eergraigllsagfslGailgpllgglla.sslg...............Wravfyilaivsllafvlfllllpeepperkrkspkeee.......... 188
                  ++ +ra++++   +slG+i+gp++gg ++  s +               + ++ +i+a +++++++ ++++l e++p+ +++ + ++           
  KHJ30251.1 142 pQHEPRAYSVMPFVWSLGTIIGPAIGGTFVdPSTSfphffsphgifarfpYLLSNLICACILMISIITGYIFLEETHPKMRPFCSLTRPsflpdgisin 240
                 59*************************999667779999999999999888888*******************99999999999988889999999999 PP

       MFS_1 189 ........................kgtgpaplvpawkallkdpvlw.....illialllfffgfsglltllplylqev 237
                                         +++ + ++++     + +p ++     +l+ia+ +f+   +++ +llp++  e+
  KHJ30251.1 241 itstnlhknlkvqetrlktygtcdSQDNRVSIKK-PNGTRDQPRIFtkritSLVIAIGIFSYHSMTYDQLLPIF-FED 316
                 9999999999999999*******95555555555.4444444444333333555555555555555*******9.444 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 1.2e-06
       MFS_1  27 lgispseigllltlyalgaavaslpl.GrlsdrfGrrrvlllglllfalglllllf.a..sslwl...llvlrvlqGlgagalfpagaaliadwfpk.e 117
                 lg+s++++g+++++ +l a+v +  +  +++  fG rr++l++ l+  +++l+ +f +  ++ wl   ++++  +  l + ++f+a ++l+ + +p  +
  KHJ30251.1 338 LGLSVQQVGIIMSVDGLIALVVQAGVfPFVAAYFGIRRIFLVASLFHPVTFLMTSFlVylPPRWLsiaIYLCLTVRNLLSIIAFSALLILLKEATPStK 436
                 89************88877666665537777789****999999999998555556335533332123555555666666667**************99 PP

       MFS_1 118 ergraigllsagfslGailgpllggllasslg....Wravfyilaivsllafvlfllllpe 174
                   g+++gl+++  s+   ++p+++g+l+s+++     ++++y+ a+++ ++++ +++   +
  KHJ30251.1 437 VLGKVNGLAASVGSACRTVAPPVAGYLYSQGSdlnfGPLAWYVSAFIAEIGAIQAFVMRSQ 497
                 9*****************************99****9999*******99999864444443 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.5   7.4   4.4e-13   2.6e-09      35     159 ..      51     168 ..      32     218 .. 0.83
   2 ?   -3.5   5.2      0.59   3.5e+03     303     371 ..     356     425 ..     335     500 .. 0.58

  Alignments for each domain:
  == domain 1  score: 36.5 bits;  conditional E-value: 4.4e-13
                 --SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-S CS
    Sugar_tr  35 sksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApk 133
                   +k     +s +sgl+ s+f++ ++++++f g l+d++GRk++ll++++ ++ + ++ ++a+   +++v ++gR l Gi  G + v+ ++    ++ +
  KHJ30251.1  51 GDEKH----ASFYSGLLISAFSLAEALTGMFWGSLSDKVGRKPILLCGCAGTILSLLIVGTAQ---NFWVALAGRALGGILNGNIAVIQTVVGELVTCP 142
                 44332....46899*************************************************...********************9999888888888 PP

                 CCHHHHHHHHHHHHHHHHHHHHHHHH CS
    Sugar_tr 134 klRgalvslyqlaitfGilvaaifgl 159
                 ++  +  s+  + +++G +++  +g 
  KHJ30251.1 143 QHEPRAYSVMPFVWSLGTIIGPAIGG 168
                 88888888888889999888876665 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 0.59
                 HHHHHH....HHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHH CS
    Sugar_tr 303 atfvai....flvdrfGRRtllllGaagmaicfvilgivalllvakskaasivaivfialfialfalgwgpvp 371
                 a +v +    f+  +fG R+++l+ +++  + f++ +  +l++     + si++  ++ +   l  + +  ++
  KHJ30251.1 356 ALVVQAgvfpFVAAYFGIRRIFLVASLFHPVTFLMTS--FLVYLPP-RWLSIAIYLCLTVRNLLSIIAFSALL 425
                 3333222234666778888888888888888777777..5555554.35555555555444444444444454 PP

>> MFS_1_like  MFS_1 like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   3.6   2.9e-07    0.0017     260     383 ..      58     180 ..      20     182 .. 0.87
   2 ?   -1.8   0.0      0.18   1.1e+03     185     267 ..     198     329 ..     188     334 .. 0.60
   3 !    4.7   2.1    0.0018        11      30      85 ..     339     394 ..     336     438 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 2.9e-07
  MFS_1_like 260 tllGslvalgvvaeiplfffaeklleklGhvklliiallayilrfllyaiienawlvlpievLhgisfgllwaaaveyvskiapksleatgqgllsgly 358
                 +  G l+    +ae  + +f   l +k+G   +l+ +   +il +l++++ +n+w++l   +L gi  g + ++ + + + ++ +++e +  +++    
  KHJ30251.1  58 FYSGLLISAFSLAEALTGMFWGSLSDKVGRKPILLCGCAGTILSLLIVGTAQNFWVALAGRALGGILNGNIAVIQTVVGELVTCPQHEPRAYSVMPF-V 155
                 55667777777788888888899************************************************6666666677788999*999999875.5 PP

  MFS_1_like 359 fglGralGsliGGllwdlksaiflF 383
                 ++lG+ +G  iGG + d ++++  F
  KHJ30251.1 156 WSLGTIIGPAIGGTFVDPSTSFPHF 180
                 **************99877776655 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.18
  MFS_1_like 185 vlaallvisllvvlilnetekesklkvtksl...................................................qvllnilknpeviifll 232
                 ++a +l+is++  +i+   e ++k+  ++sl                                                   ++  +i+  +++  +++
  KHJ30251.1 198 ICACILMISIITGYIFL-EETHPKMRPFCSLtrpsflpdgisinitstnlhknlkvqetrlktygtcdsqdnrvsikkpngtRDQPRIF-TKRITSLVI 294
                 56666666666655554.34555555555556666666666666666666666666666666666666666666666666653333333.345555666 PP

  MFS_1_like 233 valilgmswgiienFlflYLkelgasntllGslva 267
                 ++ i    +  +++ l ++++++ a  +++G++ +
  KHJ30251.1 295 AIGIFSYHSMTYDQLLPIFFEDKPANLFVAGATGF 329
                 66666666666777777777777777777777655 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.0018
  MFS_1_like  30 glkaseigiitlilpltsi.lsppiwgvlaDrfgkrkkvvilslllsavlflsllfi 85 
                 gl+++++gii+++  l+++ + + ++ ++a  fg+r   +++sl+  + +++   f+
  KHJ30251.1 339 GLSVQQVGIIMSVDGLIALvVQAGVFPFVAAYFGIRRIFLVASLFHPVTFLM-TSFL 394
                 89***********999986156789*********999866666655444433.2222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.39
# Mc/sec: 4322.97
//
Query:       KHJ30252.1  [L=691]
Description: putative mfs transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-21   74.7  24.8    7.6e-21   74.2  24.8    1.2  1  TRI12     Fungal trichothecene efflux pump (TRI12)
    5.3e-14   51.9  57.0    5.3e-14   51.9  57.0    2.8  2  MFS_1     Major Facilitator Superfamily
    2.2e-08   33.4  10.0    2.2e-08   33.4  10.0    2.2  2  Sugar_tr  Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.2  24.8   1.3e-24   7.6e-21      97     565 ..     220     687 ..     165     690 .. 0.81

  Alignments for each domain:
  == domain 1  score: 74.2 bits;  conditional E-value: 1.3e-24
       TRI12  97 vmgrltdrfgrrpfvilthilglvgaivgctatkfntllaamtllgvaagpagaspl.fvgelmsnktkflgllivsipvvvtsglspylgqrlaiqgs 194
                  +g ++d +gr+p+++   +  ++gaiv +++     ++a  tllg  a       + +v e++       gl    i + ++      l   +    s
  KHJ30252.1 220 FVGPIADLYGRKPILLSGVLCAIIGAIVCAATPTAGGFIAGQTLLGFGAVIEELMAIsIVSEVVPTAK--RGLYAALILTAILPWSPGTLYADFISSSS 316
                 468899**********************888888999*********9998776555515677765443..35554444444444333344455556789 PP

       TRI12 195 wrwifyiyiitsaiavllivvwyyppsfaqlhgkkvrkreelakldwigiilvivgvslfllgvswggkpnspwnsakviglissglgslvvfalyevy 293
                 wrwi     +   +   ++v +y+pp       +  ++ + l ++dw+g ++++ g  l+l+ + wgg+    w s++v+ ++ +g   l+ f  +e +
  KHJ30252.1 317 WRWIGIPLALWHVLIFFMVVGFYFPPPRV--NARGLSRIQLLNRIDWLGGFFLTLGLLLILIAMNWGGQQ-YAWSSSHVVSFLIAGFFLLIAFVAWEFF 412
                 ****998888888888999999***9855..566689999****************************97.57************************** PP

       TRI12 294 gkpvrpivppalfkdtrgfvcillissimgamnlslviiypqqvvnifgsslknweetawmsatasfgtgagvvvlgslfhlvrhirwqil.vgalwlt 391
                 g  + p+ p  +++  r f+cil++    g   + lv+++p + + ++gs +++   +   s    +   ag ++   l+ l +     i+   ++  t
  KHJ30252.1 413 GA-EYPLYPRRILHAPRPFLCILFVIFSAGINFIPLVVFWPIESISVYGSDMRQ---SGINSLPIGMCILAGGIISALLVALFKPRVTLIMtFFCILQT 507
                 *5.89*******************99999*********************9976...455667778888899888888888777533333314566678 PP

       TRI12 392 aflgamssvnrdnknaaialsvlsgfvvawaqditmllvqfittdedlgvafavvaaarpfagsiftaafislysnrypkelashlssalrgtdipqas 490
                 +  g+++ v+     +  a   l+ + v+       +++ ++t d+ +  a a+    r  a  i  a + s +     ++   hl++ +  ++i + +
  KHJ30252.1 508 CGAGTLAVVDPHSLRTVWAPLCLALIGVGGVLVPNQVIITILTPDDLIASATALTVGLRSQAQVIGLAIYYSRFLHVLERQALKHLAAPIVSAGIFNIT 606
                 889999999999988887777777777777777777888899999999999999999999999999999999999999999999999999999887655 PP

       TRI12 491 .fsslleaaksgrieav.kalpgmtteiaavvsramad....sytasyanvyyfamalgvipiiaslcmrdldryltdhvp 565
                  ++ l+    s  ++ +  a+p ++    a+  +a+ +    +y  ++  vy +++ +g+   ia+  m ++++y+ +hv 
  KHJ30252.1 607 vITDLVVGLASRPFDQLgPAVPQLSGPAHALAYQAVKEgalmTYKGAFDYVYLMSIGFGIAASIAAASMGNIEKYIDEHVA 687
                 15666666666667654246666666666655555544222279999999*****************************96 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9  57.0   8.9e-18   5.3e-14      14     352 ..     181     573 ..     165     574 .. 0.79
   2 ?   -3.1   0.3      0.46   2.8e+03     310     321 ..     660     671 ..     645     682 .. 0.42

  Alignments for each domain:
  == domain 1  score: 51.9 bits;  conditional E-value: 8.9e-18
       MFS_1  14 i...lgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslw.lllvlrvlqGlgagalfpagaa 108
                 i   l+++l   +aedl+  p+   +ll++  ++++++++++G+++d +Gr+++ll g+l+ ++g+++++ a++    ++++  l G+ga +   ++++
  KHJ30252.1 181 IvglLYLTLGTRIAEDLN-RPDLTIWLLSAGIIAMGALAPFVGPIADLYGRKPILLSGVLCAIIGAIVCA-ATPTAgGFIAGQTLLGFGAVIEELMAIS 277
                 22335555555789****.**********************************************66666.4666669********************* PP

       MFS_1 109 liadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafv.lfllllpeepperkrkspkeee.................. 188
                 ++++++p  +rg++ +l+ + + l    g l + +++ s +Wr++ + la+  +l f  ++++++p ++++ +  s ++++                  
  KHJ30252.1 278 IVSEVVPTAKRGLYAALILT-AILPWSPGTLYADFIS-SSSWRWIGIPLALWHVLIFFmVVGFYFPPPRVNARGLSRIQLLnridwlggffltlgllli 374
                 **************998877.3444455777888888.668****999999999998846666666666666666666666****************** PP

       MFS_1 189 .............................kgtgpaplvp..............awkallkdpvlwillialllfffgfsg.lltllplylqevlglsgl 243
                                                                      + ++l+++++++++l++++++++ f + l+++ p+   +v+g +  
  KHJ30252.1 375 liamnwggqqyawssshvvsfliagffllI--------AfvaweffgaeyplyPRRILHAPRPFLCILFVIFSAGINF-IpLVVFWPIESISVYGSD-M 463
                 *****9999988887666666555555550........1555555555555666999999999977777777776444.369999999889999999.7 PP

       MFS_1 244 llaglllallalvgail..allagrlsdrlgrrrrlllallllllaalglallavtssavllllvlvliGf.glgfvfpsllalasdlappeeagtasg 339
                  ++g  +  l ++++il  +++++ l+  +++r +l+++++++l ++ +  l+ v  +++ ++++ +++ + g+g v ++ +++++ l+p +  ++a++
  KHJ30252.1 464 RQSG--INSLPIGMCILagGIISALLVALFKPRVTLIMTFFCILQTCGAGTLAVVDPHSLRTVWAPLCLALiGVGGVLVPNQVIITILTPDDLIASATA 560
                 8888..55555555555549999999999***9999999999998888888888886677777777777777999999999999999999999****** PP

       MFS_1 340 lfntagslggalg 352
                 l+  ++s + ++g
  KHJ30252.1 561 LTVGLRSQAQVIG 573
                 9999888777776 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.46
       MFS_1 310 iGfglgfvfpsl 321
                 +++g+g++ +++
  KHJ30252.1 660 MSIGFGIAASIA 671
                 111222111111 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4  10.0   3.7e-12   2.2e-08      56     190 ..     213     340 ..     158     344 .. 0.79
   2 ?   -2.4   1.5      0.28   1.7e+03     167     439 ..     384     405 ..     354     449 .. 0.55

  Alignments for each domain:
  == domain 1  score: 33.4 bits;  conditional E-value: 3.7e-12
                 HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHH...HHHHHHHHHHHHHH CS
    Sugar_tr  56 lvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRg...alvslyqlaitfGi 151
                   Ga   + f+g+++d +GRk++ll ++++++iga+++aa++   +   +i+g+ l+G+g+ ++  ++   +sE+ p+++Rg   al+    l ++ G 
  KHJ30252.1 213 AMGA--LAPFVGPIADLYGRKPILLSGVLCAIIGAIVCAATP---TAGGFIAGQTLLGFGAVIEELMAISIVSEVVPTAKRGlyaALILTAILPWSPGT 306
                 2222..2459********************************...99**********************************933345566667778888 PP

                 HHHHHHHHHHHTSS-TTHH.HHHHHCCHHHHHHHHHHGGG CS
    Sugar_tr 152 lvaaifglglnktsnadgw.rillglqlvpallllilllf 190
                 l a ++          ++w  i+l+l  v+  +++++++f
  KHJ30252.1 307 LYADFISSSS------WRWiGIPLALWHVLIFFMVVGFYF 340
                 8877765443......333225555555555555555555 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.28
                 TTHHHHHHHCCHHHHHHHHHHGGGS---HHHHHHTT-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH.....HTTHHHHSH...HHHHHHHHHHHH CS
    Sugar_tr 167 adgwrillglqlvpallllilllflPESPrylvekgkeeeakevlaklrgeedadrelaeekdsleaeqeeekaswkellssktvrqrlligvvlqifq 265
                 +  w     +++++a ++l++                                                                              
  KHJ30252.1 384 QYAWSSSHVVSFLIAGFFLLI------------------------------------------------------------------------------ 404
                 222333333333333222222.............................................................................. PP

                 HHTTHHHHHHHTTTHHHHSS-THHHHHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHH CS
    Sugar_tr 266 qltGinaimyysptifenlglsksllvtiivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilgivalllvakskaasivaivfialfialfa 364
                                                                                                                    
  KHJ30252.1   - ---------------------------------------------------------------------------------------------------   -
                 ................................................................................................... PP

                 TTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS-- CS
    Sugar_tr 365 lgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpe 439
                                                                                           +
  KHJ30252.1 405 --------------------------------------------------------------------------A 405
                 ..........................................................................2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (691 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      249  (0.0138881); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.41
# Mc/sec: 5027.45
//
Query:       KHJ30253.1  [L=697]
Description: hypothetical protein EV44_g3297 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.7e-08   33.2   0.1    2.2e-07   31.1   0.0    2.0  2  rve              Integrase core domain
      0.005   16.7   0.1      0.018   14.9   0.1    2.0  1  gag_pre-integrs  GAG-pre-integrase domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       0.3   2.7e+03      66      79 ..      93     108 ..      76     115 .. 0.67
   2 !   31.1   0.0   2.4e-11   2.2e-07      26     113 ..     422     508 ..     403     513 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.3
         rve  66 e..pervlsDngseyt 79 
                 e   +r++sDn++ + 
  KHJ30253.1  93 EcfYQRHTSDNQKKFQ 108
                 1447899999998665 PP

  == domain 2  score: 31.1 bits;  conditional E-value: 2.4e-11
         rve  26 llvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpqdnGkvErfhr 113
                 +l+++d ++r+  a +l+ +++++++ a+ +  ++ + g  p+ ++ D g+ +tsk++++++++ g+  + +++   ++ G+vEr h 
  KHJ30253.1 422 VLHIIDEATRFQAAKFLKGQSTNDVWNAIRQSWIDVYVGP-PDLIVRDAGKNFTSKEMQQLAQSIGTGTKCAPVEAHHSIGLVERYHE 508
                 789*****************999999999999***99999.********************************************995 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1     2e-06     0.018      14      44 ..     360     395 ..     345     409 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2e-06
  gag_pre-integrs  14 svslsk.....nkssinlWHrRLGHpsfsrlkkLfk 44 
                      +v l++     ++++i++ H+R+GH s+s+l +L +
       KHJ30253.1 360 NVELVNdklklTEQQIRRLHKRFGHASVSKLGNLLD 395
                      444444233336799****************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (697 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1299  (0.0724525); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 4779.17
//
Query:       KHJ30254.1  [L=326]
Description: putative glycosyl transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1121  (0.0625244); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2413.31
//
Query:       KHJ30255.1  [L=139]
Description: putative nadh-ubiquinone oxidoreductase kda subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 1089.38
//
Query:       KHJ30256.1  [L=206]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       674  (0.0375927); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1567.33
//
Query:       KHJ30257.1  [L=358]
Description: hypothetical protein EV44_g5447 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        2.8    8.7  14.1        3.8    8.3   7.5    2.9  2  BBP1_N    Spindle pole body component BBP1, Mps2-binding prot


Domain annotation for each model (and alignments):
>> BBP1_N  Spindle pole body component BBP1, Mps2-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.4      0.12   2.2e+03      25      67 ..      82     128 ..      78     135 .. 0.67
   2 ?    8.3   7.5   0.00021       3.8      30      82 ..     200     293 ..     191     358 .] 0.53

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.12
      BBP1_N  25 ykefaqDDTNyklk....kkeknkeksseesrsRsnSwsgldssfyk 67 
                 y ++ qDD   +        +++  +    +rs sn  +g+++   +
  KHJ30257.1  82 YDDWDQDDNSRNHGllgnWGNDELGRLLAGNRSHSNRADGMNQQPRR 128
                 56677777655543555444455556677889999999999886555 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00021
      BBP1_N  30 qDDTNyklkkkeknkeksseesrsRsnSwsgldssfykkydLLedseeeeqd............................................d 82 
                   D  y++k+ +k   k ++++r    S +  ++sf  + dLL+ +eee+                                               
  KHJ30257.1 200 NSDGDYNYKH-DK--GKGHKRNRGSTMSSDQTSNSFRSRRDLLPSDEEEDAVplgdefsldverrntefgieednrqimtvrdgyvsrnssfiispV 293
                 4566666553.33..3344444444555567899**********94444433677666666666666555555555566665444444444444442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2686.60
//
Query:       KHJ30258.1  [L=286]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 1937.62
//
Query:       KHJ30259.1  [L=93]
Description: hypothetical protein EV44_g0783 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-18   66.4   0.0    4.7e-18   65.2   0.0    1.5  1  BolA      BolA-like protein


Domain annotation for each model (and alignments):
>> BolA  BolA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.2   0.0   2.6e-22   4.7e-18      14      76 .]      29      82 ..      16      82 .. 0.86

  Alignments for each domain:
  == domain 1  score: 65.2 bits;  conditional E-value: 2.6e-22
        BolA 14 deShkhaghaeaggetHFkvvivseaFegkslvarhRlvyalLkeelakgiHALslktktpee 76
                d         ++g++++F++vivs+ Fe+ks++arhRlv+++Lkee+a  iHA+++k++tp++
  KHJ30259.1 29 DI--------SGGCGQAFSCVIVSPLFENKSTLARHRLVNTILKEEIAI-IHAWTVKCYTPSQ 82
                33........368999*********************************.***********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       617  (0.0344135); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.28s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 665.50
//
Query:       KHJ30260.1  [L=140]
Description: putative csep0049 effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.063   11.2   0.0      0.075   11.0   0.0    1.1  1  Prominin  Prominin
        0.7    8.5   3.2       0.82    8.3   3.2    1.0  1  Hamartin  Hamartin protein


Domain annotation for each model (and alignments):
>> Prominin  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   8.4e-06     0.075     352     407 ..      54     109 ..      41     131 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 8.4e-06
    Prominin 352 kvknqtaevvpdlkkalakgreqikklakkiprealdavisdle.nterssktfddv 407
                  +   ++++ +  ++a+a++++qi ++a++i +++ld+++sd+  ++ ++s +fd+ 
  KHJ30260.1  54 EASARVSSINSVGQSAIASITSQIGSEASQI-SSKLDSISSDIAsKSSSYSARFDPS 109
                 5556667777778899***************.************99*****999986 PP

>> Hamartin  Hamartin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   3.2   9.2e-05      0.82     368     451 ..      20     106 ..      12     125 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 9.2e-05
    Hamartin 368 tpeaagkatpetTPakssrklppslsesavv.valpassrksspprkdeks.esskpdlskqeev..enekeleeslkskssvtlseL 451
                 +pe+ + + petTP  s+ ++pps  ++ ++  a  as+r ss  +  ++   s  +++ +++++  ++ ++++++  skss ++ ++
  KHJ30260.1  20 IPEN-IHNAPETTPPVSIATAPPSPGDDLAHsLASEASARVSSINSVGQSAiASITSQIGSEASQisSKLDSISSDIASKSSSYSARF 106
                 6887.999***********999999999999444444555555555555556666676666655544555666666667776666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1024.94
//
Query:       KHJ30261.1  [L=401]
Description: hypothetical protein EV44_g5994 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       692  (0.0385967); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2886.82
//
Query:       KHJ30262.1  [L=588]
Description: putative sporulation protein rmd8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-56  191.2   1.5    2.2e-56  190.7   0.4    1.8  2  DUF155        Uncharacterised ACR, YagE family COG1723
  ------ inclusion threshold ------
      0.059   11.9   0.2       0.09   11.3   0.2    1.2  1  MFS_2         MFS/sugar transport protein
       0.12   12.7   0.0       0.29   11.5   0.0    1.7  1  TAL_effector  TAL effector repeat


Domain annotation for each model (and alignments):
>> DUF155  Uncharacterised ACR, YagE family COG1723
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.4   8.1e+03      94     120 ..      53      77 ..      46      86 .. 0.65
   2 !  190.7   0.4   3.7e-60   2.2e-56       1     176 []     312     493 ..     312     493 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.4
      DUF155  94 sldellestekipkelakkgklklsrk 120
                  +d++l+++++ip+  ++ +  ++ rk
  KHJ30262.1  53 TVDQMLQNVSEIPSGQSRLQ--PMLRK 77 
                 57788888888887666554..55444 PP

  == domain 2  score: 190.7 bits;  conditional E-value: 3.7e-60
      DUF155   1 vfiFknGsvVfwgldeeeeknflnkllkflnees.....elpreeeqeteeleyvydeqsessrikgdvivlkskslleklaiShalaqSvkLdvlEes 94 
                 +f+F++G+vVfw++ e++ek++l++l+    ++s      + +++ +e+ee+++ y++  ++sr+ +d+i+l+s +++ kl+iSha+aqS+kL ++Ee+
  KHJ30262.1 312 MFVFSYGVVVFWNFREKQEKDILADLTFSNHQKSnslvsRPLEQDDYEKEEFHFEYSSYVKRSRVFNDMITLRSGDHMIKLTISHAIAQSTKLCLFEEQ 410
                 6*************************98877777999987777777779************************************************** PP

      DUF155  95 ldellestekipkelakkgklklsrkellkktgellslrinlnlkselldtPdffWee.peleslyeavseyleikeRikiLn 176
                 +++++++ ++ipk+la +g+l lsr +++k +g+l+++r ++nl+s++ld+P+ffW++ p+l++ly a+++ylei++Rik+Ln
  KHJ30262.1 411 MNQTMANAQHIPKHLALTGQLGLSRCQIVKILGNLFKSRVDVNLSSNILDVPNFFWDSePTLHPLYSAIRDYLEITPRIKVLN 493
                 ********************************************************555***********************9 PP

>> MFS_2  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.2   1.5e-05      0.09      95     144 ..     516     565 ..     505     569 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.5e-05
       MFS_2  95 akfiwllvtyillrilytlfeipyvslvpvltkdydeRtsltsvrsflsv 144
                 +++ w+++++i+  i++t++e+   sl+ + ++ + ++  +++ +++ +v
  KHJ30262.1 516 STITWIIIALIIISICVTVMEVGLRSLIFARSRPNNDHKLFDGTKNWTNV 565
                 6788************************************9999998776 PP

>> TAL_effector  TAL effector repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   4.8e-05      0.29      14      33 .]     424     444 ..     422     444 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.8e-05
                   HHHHHH.TT--HHHHHHHHTS CS
  TAL_effector  14 gpaLrq.rGfSradIVkIAgN 33 
                   + aL++  G+Sr +IVkI gN
    KHJ30262.1 424 HLALTGqLGLSRCQIVKILGN 444
                   7899999***********665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       820  (0.045736); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4113.77
//
Query:       KHJ30263.1  [L=72]
Description: hypothetical protein EV44_g0256 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       327  (0.0182386); expected 358.6 (0.02)
Passed bias filter:                      220  (0.0122706); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.24s 00:00:00.58 Elapsed: 00:00:00.38
# Mc/sec: 564.82
//
Query:       KHJ30264.1  [L=1186]
Description: putative gata transcription factor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00094   18.7   6.8       0.26   10.9   2.9    2.6  2  GATA      GATA zinc finger


Domain annotation for each model (and alignments):
>> GATA  GATA zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   2.9   1.5e-05      0.26       1      15 [.     689     703 ..     689     710 .. 0.88
   2 !    8.9   0.1   6.3e-05       1.1      19      34 ..     759     774 ..     753     776 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 1.5e-05
        GATA   1 CsnCgttkTplWRrg 15 
                 C nCg+++Tp WR++
  KHJ30264.1 689 CCNCGAIETPTWRKA 703
                 99***********97 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 6.3e-05
        GATA  19 nksLCnaCGlyykkkg 34 
                  + LCn+CG+ + k++
  KHJ30264.1 759 DYLLCNPCGIWMSKYK 774
                 567*******998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1214  (0.0677115); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.23s 00:00:00.99 Elapsed: 00:00:00.40
# Mc/sec: 8872.77
//
Query:       KHJ30265.1  [L=88]
Description: hypothetical protein EV44_g1963 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      187  (0.01043); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 659.57
//
Query:       KHJ30266.1  [L=153]
Description: hypothetical protein EV44_g3288 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.29   11.6   6.7       0.76   10.2   3.8    2.0  2  CENP-H    Centromere protein H (CENP-H)
       0.29   11.6   8.4       0.39   11.2   8.4    1.2  1  APG6_N    Apg6 coiled-coil region
        0.7   10.6   5.7        1.9    9.2   2.4    2.1  2  YabA      Initiation control protein YabA


Domain annotation for each model (and alignments):
>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.8   0.00013      0.76       9      77 ..      66     133 ..      61     135 .. 0.82
   2 ?    6.7   4.2    0.0015       9.2       6      46 ..     112     152 ..     108     152 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00013
      CENP-H   9 delssellklsqelrelqeeltevekenlrlkrknrelaaellelakekesek...eklkeelekleaelkk 77 
                  +ls+e++ l++++ +l+ e  + + +     ++n+el    l+l k+k++ +   +    +l++  a l++
  KHJ30266.1  66 VQLSEEIMTLATAYVQLEGEFLQYKNDYDTPLERNQELSDANLKLDKQKKTASsgsS----QLQQQNASLQQ 133
                 689************************************999999999999995544....45555555444 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0015
      CENP-H   6 eqrdelssellklsqelrelqeeltevekenlrlkrknrel 46 
                 +q  ++ss   +l+q+ ++lq+++  ++ +n++l ++n++l
  KHJ30266.1 112 KQKKTASSGSSQLQQQNASLQQQIIGLQLQNKSLLQHNQSL 152
                 56667777777888888888888888888888888888765 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   8.4   6.6e-05      0.39      48     122 ..      78     152 ..      48     153 .] 0.87

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 6.6e-05
      APG6_N  48 eleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynelqlelleleeeldsl 122
                    +le e+ + +++ ++ le  +el +++ +l+++ +++++ +++l+++++   ++   lql+ ++l +  +sl
  KHJ30266.1  78 AYVQLEGEFLQYKNDYDTPLERNQELSDANLKLDKQKKTASSGSSQLQQQNASLQQQIIGLQLQNKSLLQHNQSL 152
                 55678899999*****************************************************99999999987 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.4   0.00032       1.9       5      65 ..      67     127 ..      62     135 .. 0.76
   2 ?    5.0   1.6    0.0063        38      10      41 ..     121     152 ..     113     153 .] 0.76

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00032
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXX CS
        YabA   5 elfdkleeleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekekkke 65 
                 +l +++++l +   +l  e+ + k++  + le+n+eL+  n kl ++ +++++ +++ +++
  KHJ30266.1  67 QLSEEIMTLATAYVQLEGEFLQYKNDYDTPLERNQELSDANLKLDKQKKTASSGSSQLQQQ 127
                 6889999**********************************99988874333333332222 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0063
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA  10 leeleeqleelleeleelkeelaelleenaeL 41 
                  ++l++q ++l++++  l+ + ++ll++n++L
  KHJ30266.1 121 SSQLQQQNASLQQQIIGLQLQNKSLLQHNQSL 152
                 56788888888888888888888888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1377  (0.0768029); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1115.57
//
Query:       KHJ30267.1  [L=114]
Description: hypothetical protein EV44_g2352 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       213  (0.0118802); expected 358.6 (0.02)
Passed bias filter:                      169  (0.00942607); expected 358.6 (0.02)
Passed Vit filter:                         6  (0.000334653); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 820.44
//
Query:       KHJ30268.1  [L=626]
Description: putative sap domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.3e-11   41.2   1.6    1.6e-10   40.5   1.6    1.4  1  SAP        SAP domain
    8.6e-05   22.8   0.0    8.6e-05   22.8   0.0    4.2  3  RSB_motif  RNSP1-SAP18 binding (RSB) motif


Domain annotation for each model (and alignments):
>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   1.6   1.7e-14   1.6e-10       1      34 [.       4      37 ..       4      38 .. 0.97

  Alignments for each domain:
  == domain 1  score: 40.5 bits;  conditional E-value: 1.7e-14
                HTT--HHHHHHHHHHTT--TTS-HHHHHHHHHHH CS
         SAP  1 lskltVaeLKeeLkkrGLptsGkKaeLieRLkey 34
                ++k++V++LK eLkkrGL ++G+K  L++RL+e+
  KHJ30268.1  4 YNKWKVTDLKLELKKRGLLQTGVKSLLVARLEEA 37
                8*******************************97 PP

>> RSB_motif  RNSP1-SAP18 binding (RSB) motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1      0.25   2.2e+03      34      60 ..     103     129 ..      36     138 .. 0.69
   2 ?  -13.6  17.2         2   1.8e+04      59      59 ..     177     177 ..     111     281 .. 0.71
   3 !   22.8   0.0   9.5e-09   8.6e-05      66      94 ..     500     528 ..     496     534 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.25
   RSB_motif  34 errrerskskekrreskaskekkkeee 60 
                 + +++ s+sk++  e++ s+ +++ ee
  KHJ30268.1 103 KYNHTSSPSKDQDDEQNDSNLPRAIEE 129
                 223345555555555555555555555 PP

  == domain 2  score: -13.6 bits;  conditional E-value: 2
   RSB_motif  59 e 59 
                 e
  KHJ30268.1 177 E 177
                 1 PP

  == domain 3  score: 22.8 bits;  conditional E-value: 9.5e-09
   RSB_motif  66 lDdlFrkTkatPciYwlPLteeqiaekea 94 
                 l++lF +T ++P +Yw P+++e ++++ +
  KHJ30268.1 500 LNELFNSTVTKPLLYWKPVSRELANKRLD 528
                 89********************9999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (626 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1002  (0.0558871); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.33s 00:00:01.06 Elapsed: 00:00:00.44
# Mc/sec: 4317.37
//
Query:       KHJ30269.1  [L=591]
Description: putative autophagy protein atg22 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.2e-175  584.8  20.6   1.4e-175  584.6  20.6    1.0  1  ATG22     Vacuole effluxer Atg22 like
    2.3e-10   39.6   6.4    2.3e-10   39.6   6.4    2.5  3  MFS_2     MFS/sugar transport protein
    4.1e-10   39.1  40.2      1e-08   34.6  14.2    3.2  3  MFS_1     Major Facilitator Superfamily
  ------ inclusion threshold ------
       0.18   11.0   0.0       0.27   10.4   0.0    1.1  1  TPR_15    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> ATG22  Vacuole effluxer Atg22 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  584.6  20.6  3.1e-179  1.4e-175       1     476 [.      75     584 ..      75     586 .. 0.97

  Alignments for each domain:
  == domain 1  score: 584.6 bits;  conditional E-value: 3.1e-179
       ATG22   1 ttkkellgWylyafaaevfavvavgsfvPllleqlarenGvllsdksapCsakgde...qcvvkflgieidtaSfvlytfslsvllqavvvislsglAD 96 
                 t++kel gWy+y faaevf+++++gs++P++leqlarenGvllsd+s++C +++++    c+v++lgi+i+taSf++ytfs+ vl+q+++v+s+s++AD
  KHJ30269.1  75 TSRKELIGWYIYNFAAEVFVICGAGSYLPVVLEQLARENGVLLSDNSTSCGSSSSDpseICIVHLLGISINTASFAMYTFSIGVLFQTILVVSISSAAD 173
                 79************************************************9988776779*************************************** PP

       ATG22  97 ygnyrknlLlafaligslstilfllvtpkkYllgavlyivsntcfgaslvllnsfLPllvredpelqeaeeeeeee................eesseta 179
                 +gn rk+lLl+fa+ g+++t+lfl++ pk Y+++a+l+i snt  gas+v+lns+LPllvr++p++  ++ +++ e                 +++   
  KHJ30269.1 174 HGNSRKRLLLIFAYSGAITTMLFLFMIPKLYFMAAILAIFSNTFSGASFVMLNSLLPLLVRNHPKVLYHKIQSQLEgeeipssaspllaqvsVTETMPI 272
                 ******************************************************************7666666666789*********98765555556 PP

       ATG22 180 eeeeskelklstriSslGlaigylgailvqiisilivialgstatfslrlalllvGlwWliftipaalllkkrpgpplp...........kglsyliyg 267
                  ++   el+lst+iSslG++ gy++a++vq+ si++++ +gs+ tfsl+++l+l+G+wW++ftipa +ll++r+g p++            +ls ++++
  KHJ30269.1 273 RNKILGELELSTQISSLGAGAGYCAALFVQCASIAVILVMGSS-TFSLKMVLFLIGCWWAAFTIPAGYLLRTRQGLPFNsrdtranihdtGWLSNFADA 370
                 66777899**********************************9.******************************************************* PP

       ATG22 268 wkslgrtlkqarklkdvllfLvawfllsdgiatvsstavlfaktelkmstaklillsivaviaavlGaflwplvsrrlnlktkktllaiivlfeliply 366
                 w+ l+r +k + + +d+ lfL+awf+lsd++atvs+ta+l+akt+l+m++ +++l+++++++++++Gaf+w+l+sr ++lk+++++l++i+lfe+iply
  KHJ30269.1 371 WSLLWRRFKMIFQSRDISLFLLAWFFLSDAMATVSGTAILYAKTTLRMKPEAIGLINVIVTVTGIIGAFSWSLISRFFGLKPNQIILLCICLFEFIPLY 469
                 *************************************************************************************************** PP

       ATG22 367 GllGii.....lgkiGlkqpwEfyvlavvyglvlgglssysRslfseLiPrGkEaaFFsLyaitdkgssvigplivglItDrtgnirsafvflavLlvv 460
                 Gl G++     +g+iGl+qpwE+y+l++vyg+v+ggl sy+Rslf+eLiP+G+Ea+FF+Lyaitdkgss +gp+ivg I+D++g+ir+af+fla+L+ v
  KHJ30269.1 470 GLSGFLpivesWGVIGLQQPWEMYLLGFVYGFVIGGLTSYCRSLFGELIPPGSEASFFALYAITDKGSSAFGPAIVGTIIDKYGDIRPAFWFLALLIGV 568
                 *************************************************************************************************** PP

       ATG22 461 plpllllvdvergrre 476
                 p pl++l+dv+rg+++
  KHJ30269.1 569 PGPLIWLLDVNRGKKK 584
                 **************97 PP

>> MFS_2  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.6   9.5    0.0089        40     259     340 ..     145     230 ..     137     234 .. 0.72
   2 ?   -5.6   2.7       2.7   1.2e+04     299     326 ..     302     328 ..     289     340 .. 0.46
   3 !   39.6   6.4   5.1e-14   2.3e-10     210     385 ..     371     553 ..     363     558 .. 0.92

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.0089
       MFS_2 259 saasvfllvvtisallgiplwqplakrlg....kkntyllgalltivllvlvlllqpsnlllflvllviagfgvgvaallpwsmla 340
                 + as+ ++++ i++l  ++l+  + +  +    +k++ l++a + ++ ++l+l++ p+ + ++ +l++ ++++ g++++++ s+l+
  KHJ30269.1 145 NTASFAMYTFSIGVLFQTILVVSISSAADhgnsRKRLLLIFAYSGAITTMLFLFMIPKLYFMAAILAIFSNTFSGASFVMLNSLLP 230
                 45666666677777766666666666655555666777777777766666666665999999999999999*******99999987 PP

  == domain 2  score: -5.6 bits;  conditional E-value: 2.7
       MFS_2 299 tivllvlvlllqpsnlllflvllviagf 326
                 + +  +++l++  s++  + ++l+++g 
  KHJ30269.1 302 QCASIAVILVM-GSSTFSLKMVLFLIGC 328
                 33333333333.3333333333333333 PP

  == domain 3  score: 39.6 bits;  conditional E-value: 5.1e-14
       MFS_2 210 klslleqlkevfrnraflillllfllaalalgvlnglllYyltyvlg.ngsaasvfllvvtisallgiplwqplakrlgkk..ntyllgall..tivll 303
                 +  l++ +k +f++r   ++ll+ ++ + a++   g +++y++ +l+ + +a+ ++ ++vt+ +++g++ w+ + + +g k  +++ll+++l   i+l+
  KHJ30269.1 371 WSLLWRRFKMIFQSRDISLFLLAWFFLSDAMATVSGTAILYAKTTLRmKPEAIGLINVIVTVTGIIGAFSWSLISRFFGLKpnQIILLCICLfeFIPLY 469
                 566899*************************************************************************55467777777773348888 PP

       MFS_2 304 vlvlll.........qpsnlllflvllviagfgvgvaallpwsmladvvDygelktGkrregvffavlsfisklatgiglgvsgllLsafg 385
                  l  +l         + ++ + +++l +++gf +g+++++  s++++++  g        e +ffa++++++k  +++g +++g +++ +g
  KHJ30269.1 470 GLSGFLpiveswgviGLQQPWEMYLLGFVYGFVIGGLTSYCRSLFGELIPPGS-------EASFFALYAITDKGSSAFGPAIVGTIIDKYG 553
                 888888*********99********************************9998.......9**************************9875 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   6.0   1.2e-06    0.0055      22     111 ..     135     230 ..      75     238 .. 0.68
   2 ?    0.9   4.1     0.037   1.7e+02     278     322 ..     293     338 ..     277     346 .. 0.63
   3 !   34.6  14.2   2.2e-12     1e-08       5     180 ..     395     583 ..     390     590 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.2e-06
       MFS_1  22 alaedlgispseigllltlyalga...avaslplGrlsdr.fGrrrvlllglllfalg.lllllfasslw.lllvlrvlqGlgagalfpagaalia 111
                 ++ + lgis  ++++++ ++++g     ++++ +++ +d   +r+r+ll+ + + a++ +l+l++++ l+ + ++l +++  ++ga+f + ++l+ 
  KHJ30269.1 135 CIVHLLGISINTASFAMYTFSIGVlfqTILVVSISSAADHgNSRKRLLLIFAYSGAITtMLFLFMIPKLYfMAAILAIFSNTFSGASFVMLNSLLP 230
                 556668899999999777777755222566666666666533477766666666666635555555777768888888888888888888777765 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.037
       MFS_1 278 llallllllaalglallavt.ssavllllvlvliGfglgfvfpsll 322
                    +++l++ ++++a++ v  ss++ l +vl+liG+ ++ +++++ 
  KHJ30269.1 293 AGYCAALFVQCASIAVILVMgSSTFSLKMVLFLIGCWWAAFTIPAG 338
                 4556777777777777777733444444477778885555544443 PP

  == domain 3  score: 34.6 bits;  conditional E-value: 2.2e-12
       MFS_1   5 aflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrr..vlllglllfalg.lllll.f.....a......sslwll 88 
                 +fls +++++ g+a+  + +++l + p +igl+ ++++++ +++++ ++ +s  fG ++  ++ll++ lf +  l+ l+ f     +      ++ w +
  KHJ30269.1 395 FFLSDAMATVSGTAIL-YAKTTLRMKPEAIGLINVIVTVTGIIGAFSWSLISRFFGLKPnqIILLCICLFEFIpLYGLSgFlpiveSwgviglQQPWEM 492
                 6777788888888887.***************************************665557777777777775666668756544144556666778* PP

       MFS_1  89 lvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg.Wravfyilaivsllafvlfllllpeepperk 180
                 ++l ++ G+  g+l++ + +l+ ++ p+   ++ ++l++++   ++++gp++ g +++ +g  r +f++la++  + + l  ++l++ ++ +k
  KHJ30269.1 493 YLLGFVYGFVIGGLTSYCRSLFGELIPPGSEASFFALYAITDKGSSAFGPAIVGTIIDKYGdIRPAFWFLALLIGVPGPL--IWLLDVNRGKK 583
                 *********************************************************66666***********9998886..55544444444 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   6.1e-05      0.27     217     257 ..     330     370 ..     328     373 .. 0.95

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 6.1e-05
      TPR_15 217 wgplaaAlllLgrpkkALeylrkqakenrkdplwllaYADa 257
                 w++++    +L r+++ L++  + +++n  d  wl  +ADa
  KHJ30269.1 330 WAAFTIPAGYLLRTRQGLPFNSRDTRANIHDTGWLSNFADA 370
                 89999999********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3940.16
//
Query:       KHJ30270.1  [L=469]
Description: putative delta fatty acid desaturase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-22   80.5  17.3    4.1e-22   79.3  17.3    1.5  1  FA_desaturase  Fatty acid desaturase
    4.3e-07   30.2   0.0    1.8e-06   28.2   0.0    1.9  2  DUF3474        Domain of unknown function (DUF3474)


Domain annotation for each model (and alignments):
>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.3  17.3   4.6e-26   4.1e-22       3     248 ..     129     414 ..     127     418 .. 0.77

  Alignments for each domain:
  == domain 1  score: 79.3 bits;  conditional E-value: 4.6e-26
  FA_desaturase   3 wlalllalllglf.llgitgslaHeaaHgalfkkrklnrwlndllgallglplgisysawrisHlrHHaytngpdeDpdlaplal........... 86 
                    w+++   ++ glf ++++  +laHe++H++++    ++++lnd  g+++  +l+++y++w+isH +HH+ t++ ++D  + p              
     KHJ30270.1 129 WAIYT--FIQGLFgTGLW--VLAHECGHQSFS----TSKILNDTTGWICHSALLVPYFSWKISHGKHHKATGHMERDMVFVPKTRqiyasrigkfa 216
                    88888..9*****66666..************....9********************************************9999****8888888 PP

  FA_desaturase  87 .........srfeglfryllrlllgllvlgwllalvlgl...............wlrrlarrrapsksrrrk..wrllawlllllawlglwlalll 156
                             ++ ++lf+ +++ l g  ++ ++    + +               + r++ +++ +s+ +++k    +l+  l +   + ++++l+ 
     KHJ30270.1 217 heldelteeAPISTLFHSIAQQLIGWPLYLFANVTGHNYhenqsegrgvgksngLGRGVNHFSPQSPLFEAKdaSLILLSDLGVGLTVTALIMLSK 312
                    888888777666666666444444444444333333322344445777777777777777777777777766653333333333333555555555 PP

  FA_desaturase 157 llglall..lwlvplllllfllalvlnyveHyg........gdwgerqvetsasirsaswllnlltgnln.yHieHHlfPgvpwyrLpelhrrlre 241
                      g++    ++l+p+l ++++l+ + ++++H+          +w   +++  +  r  + + + +++ +   H+ HH+  ++p+y+  e+++++++
     KHJ30270.1 313 MYGFSNIlvWYLIPYLWVNHWLVAI-TFLQHTDpslphytgSSWNFVRGAAATIDREFGFIGRKIFHEIIeTHVLHHYVSTIPFYHAEEATEAIKP 407
                    555544488****************.*******99999987777776666666666888888888888878************************* PP

  FA_desaturase 242 llpehgl 248
                    ++++h+ 
     KHJ30270.1 408 VMGKHYR 414
                    ****985 PP

>> DUF3474  Domain of unknown function (DUF3474)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   0.0     2e-10   1.8e-06      72     128 ..      48     101 ..       6     108 .. 0.76
   2 ?   -1.7   0.0      0.35   3.1e+03      46      95 ..     231     283 ..     194     286 .. 0.61

  Alignments for each domain:
  == domain 1  score: 28.2 bits;  conditional E-value: 2e-10
     DUF3474  72 eeekeseelngveeeeeefDpgaPPPfkLadiraaiPkhCWvkdpWrsmsyvvrDvv 128
                  e+++++  +  ++++++f+    P +++ dir aiPkhC+ +   r + yv rD++
  KHJ30270.1  48 PESNKQQFGTLLDTKGNKFE---VPEYTINDIRNAIPKHCFERSGLRGLGYVARDIA 101
                 33333333344446777776...499*****************************97 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.35
     DUF3474  46 vvsvslsrernWalkvsaPlkvasveeeekeseelngve...eeeeefDpgaP 95 
                 ++ + +++   W l   a ++ +  +e+++e + +++ +   ++ ++f p +P
  KHJ30270.1 231 LFHSIAQQLIGWPLYLFANVTGHNYHENQSEGRGVGKSNglgRGVNHFSPQSP 283
                 44444455556888877777777777666665555443333388888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       613  (0.0341904); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.30s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3260.45
//
Query:       KHJ30271.1  [L=127]
Description: hypothetical protein EV44_g3165 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.052   13.6   1.2      0.094   12.8   1.2    1.4  1  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.2   5.2e-06     0.094       2      17 ..      17      32 ..      16      32 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 5.2e-06
                CTSSSSSSSSTTTTST CS
     zf-CCHC  2 kCynCGepGHiardCp 17
                +Cy C ++ H+   Cp
  KHJ30271.1 17 QCYQCKSEEHRVDTCP 32
                7**********99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1195  (0.0666518); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 947.53
//
Query:       KHJ30272.1  [L=390]
Description: putative g1 s-specific cyclin cln1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.9e-37  125.8   0.9    7.9e-37  125.8   0.9    2.5  2  Cyclin_N  Cyclin, N-terminal domain
    4.7e-12   46.1   0.6    2.3e-11   43.8   0.6    2.1  1  Cyclin_C  Cyclin, C-terminal domain
  ------ inclusion threshold ------
      0.048   13.7   0.1      0.099   12.7   0.1    1.4  1  MAGI_u1   Unstructured region on MAGI


Domain annotation for each model (and alignments):
>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.8   0.9   1.3e-40   7.9e-37       1     126 [.      53     180 ..      53     181 .. 0.97
   2 ?   -1.3   0.0      0.28   1.7e+03      57      69 ..     285     297 ..     253     309 .. 0.68

  Alignments for each domain:
  == domain 1  score: 125.8 bits;  conditional E-value: 1.3e-40
                 HHHHHHHHHHCHTS-STTCTTCTSSS-HHHHHHHHHHHHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHH..HSSS---HHH CS
    Cyclin_N   1 dilknlieqelkflpkpdyldqqpelnpemRailidwlvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKv..eeisppkled 97 
                 di++++++ e  +lp+   +d q+e+++ mR+ lid+lve ++ ++l pet+fl+vn+ldR++s++ v k++ qlvg+++Ll+AaK+  +++++p + +
  KHJ30272.1  53 DIIQHMHHMESVTLPDVASMDIQHEIQWFMRPYLIDFLVEAHAAYQLLPETFFLTVNLLDRYCSRRVVYKRHYQLVGCAALLIAAKYadRKDRVPMIAE 151
                 79*************************************************************************************555566****** PP

                 HHHHTTTSS-HHHHHHHHHHHHHHTTT-- CS
    Cyclin_N  98 lvyitdeafteeeilemErliLetLnfdl 126
                 l  ++ ++++e+++++mE ++L+tL++ +
  KHJ30272.1 152 LRKMCCKVYDEDMFTQMEWHVLNTLEWVI 180
                 ***************************87 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.28
                 HHHHHHHHHS--- CS
    Cyclin_N  57 nyldRflskksvp 69 
                 n++d fl++++v 
  KHJ30272.1 285 NIVDNFLREQEVI 297
                 6777777755433 PP

>> Cyclin_C  Cyclin, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.8   0.6   3.9e-15   2.3e-11       1     118 [.     183     288 ..     183     289 .. 0.77

  Alignments for each domain:
  == domain 1  score: 43.8 bits;  conditional E-value: 3.9e-15
                 --HHHHHHHHHCCSSHT.-HCCHHCHHCHHHHHHCSCCHCCS-HHHHHHHHHHHCCHHHHS--S-HHHHHHC---HHHHHHHHHHHHHHHHHHHGSS-- CS
    Cyclin_C   1 ptplsFlrrflkaadasedselrtlakylleltlldydflsyppSliAaaalllarstlnspewtetlehytgyskedlkpcvelilellssapssklq 99 
                 pt+ +F+r+   + +   d +++++a yl+el+ ++ +f+s +pS++A+a+l+lar +l++pe   ++e+ +     ++++ +  + + l   +s + +
  KHJ30272.1 183 PTVDCFVRLAAEN-ETIGDVQVEHMAWYLCELACYHKEFVSRKPSTMASASLALARGILGRPE---AMESQS----YEVRQTIYELSQKL---ES-TSH 269
                 7888888888877.455678***************************************8886...667777....23333333333333...23.335 PP

                 HHCCCCTCGGGCCCGGS-S CS
    Cyclin_C 100 avrrkyssskfhkvstlse 118
                   +rky+ss   +vs +++
  KHJ30272.1 270 VLFRKYASSHLSRVSNIVD 288
                 8999999999999998875 PP

>> MAGI_u1  Unstructured region on MAGI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   1.7e-05     0.099      11      48 ..     320     356 ..     315     362 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.7e-05
     MAGI_u1  11 spssestpkRnKSyndMenAgIeppeeeeeedspmnss 48 
                 ++s  +tp+R   y++M      pp ++e e  + ns+
  KHJ30272.1 320 AGSYPGTPQRQNYYSNMSHGYMTPPITPEGEYFI-NSN 356
                 799**************************99998.887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 2947.41
//
Query:       KHJ30273.1  [L=285]
Description: putative at dna binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-45  153.2   0.0    7.9e-45  152.4   0.0    1.4  1  EVE         EVE domain
  ------ inclusion threshold ------
       0.12   12.1   0.0       0.19   11.4   0.0    1.3  1  Tombus_P19  Tombusvirus P19 core protein


Domain annotation for each model (and alignments):
>> EVE  EVE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.4   0.0   8.8e-49   7.9e-45       1     143 [.     109     267 ..     109     269 .. 0.96

  Alignments for each domain:
  == domain 1  score: 152.4 bits;  conditional E-value: 8.8e-49
                 -EEEEEEBHHT.........SHHHHH.CHHHCEEE-EE-GHHHHHHHCC--TT-EEEEEETSSSS-EEEEEEEEECEEEE-GGGG-TTSTT--TTTBTT CS
         EVE   1 ayWllksepde.........fsiddl.krkkeegWdgvrnyqarnllramkkGDlvlfYhsgeklqaivgiaeVvseaypdetqfdpkskyydpkskke 89 
                 +yWllk+ep++         fsiddl +r++ e+Wdg+rny arn+lr+mkkGD ++fYhs++k +aivgi+e+v e+ pd ++ dp+s+yydpk++++
  KHJ30273.1 109 QYWLLKAEPESrlekgvdikFSIDDLaARTVPEPWDGIRNYAARNHLRSMKKGDFAFFYHSSCKVPAIVGIMEIVCEHSPDLSANDPNSPYYDPKENPA 207
                 7*********99999************************************************************************************ PP

                 S-.-EEEEEEEEEEEEEEEEHHHHTT.....HGTCTTSHHHHCCT-SEEEE-HHHHHHHH CS
         EVE  90 kp.wlrvdvkpvkklkrplslkelka.....epelegmkllrkgrlsvrpvteedwelil 143
                 +p w+ v+v++ +klk p++lkelka      + l ++++l+  r+sv++v+e++w++++
  KHJ30273.1 208 DPkWSLVHVEFRQKLKCPITLKELKAwhiekGHVLGNLQMLKLTRMSVSKVEESEWNFLI 267
                 **************************7664434899*********************987 PP

>> Tombus_P19  Tombusvirus P19 core protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.1e-05      0.19      24      66 ..     193     237 ..     184     261 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.1e-05
                 XX---S-SS------HHHHHHHHHH--------SEEEEE..EEET CS
  Tombus_P19  24 gdstapfklpdespssdewrlhndetdsdtdnplgfkes..wsvg 66 
                  d  +p+  p e p+  +w l + e+ ++  +p+ +ke   w + 
  KHJ30273.1 193 NDPNSPYYDPKENPADPKWSLVHVEFRQKLKCPITLKELkaWHIE 237
                 67789********************************95236655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1480  (0.0825478); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 2348.57
//
Query:       KHJ30274.1  [L=1641]
Description: putative mitogen-activated protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-62  211.3   0.0    2.6e-62  210.6   0.0    1.4  1  Pkinase         Protein kinase domain
    5.1e-45  153.8   0.0    8.3e-45  153.1   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
      2e-10   40.5   0.0    7.7e-07   28.7   0.0    2.2  2  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.012   15.0   0.0      0.026   13.9   0.0    1.4  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
      0.063   13.2   0.1       0.23   11.4   0.0    1.9  2  APH             Phosphotransferase enzyme family
        2.8    6.6  10.9      0.046   12.5   2.2    2.5  2  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.6   0.0   8.8e-66   2.6e-62       4     262 ..    1353    1618 ..    1350    1620 .. 0.89

  Alignments for each domain:
  == domain 1  score: 210.6 bits;  conditional E-value: 8.8e-66
                  EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH........HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHH CS
     Pkinase    4 leklGeGsfGkVykaveketgkivAvKkikkekakkkke........kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerk 92  
                   + +G+G++G+Vy +++++tg+  AvK+++++ +    +         ++ +Ei  +++l+h niv+++++ ++++++ ++ley++gg++ + l+++
  KHJ30274.1 1353 GQLIGKGTYGRVYLGMNATTGEFLAVKQVEVSAKAAGYDkdkmremvAALDQEIDTMQHLDHANIVQYLGCERKETSISIFLEYISGGSVGSCLRKH 1449
                  689***************************9987765555567778888889********************************************* PP

                  SS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS...BCTTTSCGGGS-HHHH..TTSCBSHHHHHHHHH CS
     Pkinase   93 gslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk...ltsfvgtseYlAPEvl..keneyskkvDvWslG 184 
                  g+++e  ++++++q+l+gl+ylH++gi+HrDlK +NiL+d +g  Ki+DFG++k+ ++       +s+ g+  ++APEv+  ++++ys+kvD+WslG
  KHJ30274.1 1450 GKFEEMVVSSLTRQTLSGLAYLHREGILHRDLKADNILLDLDGTCKISDFGISKKTDNIYGndaSNSMQGSVFWMAPEVVrsRGQGYSAKVDIWSLG 1546
                  *******************************************************9998777889***************8888************* PP

                  HHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHH.TSG CS
     Pkinase  185 vilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeell.qhp 262 
                  ++++e+++g+ p+s   ++e    ++  + k+  + +      + a+ is+ a  ++ ++++ dp++R+ a+ ll qhp
  KHJ30274.1 1547 CVVLEMFAGRRPWS---KEE----IVGAIYKLGSLNEAPPIPDDVANAISPIAVAFMADCFTIDPSERPIADTLLsQHP 1618
                  **************...333....4444334444444445566677777*********************999872455 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.1   0.0   2.8e-48   8.3e-45       4     256 ..    1353    1614 ..    1351    1616 .. 0.88

  Alignments for each domain:
  == domain 1  score: 153.1 bits;  conditional E-value: 2.8e-48
                   EEEEEEESSEEEEEEEEET...TTTSSEEEEEEEEE..STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHH CS
  Pkinase_Tyr    4 gkklGeGafGkVvegtlkg...ekekkevkVavKtl..keeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrk 94  
                   g+ +G+G++G+V+ g   +       k+v+V  K    ++++++e  ++l +e+++m++l+h niv++lg+  ke ++ i +ey++gG++ + Lrk
   KHJ30274.1 1353 GQLIGKGTYGRVYLGMNATtgeFLAVKQVEVSAKAAgyDKDKMREMVAALDQEIDTMQHLDHANIVQYLGCERKETSISIFLEYISGGSVGSCLRK 1448
                   5789***********9887655556778888888875456666666889999******************************************** PP

                   TCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE..EEHHHHH CS
  Pkinase_Tyr   95 kekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk..ftsksDv 188 
                   +   k++   + s++ q  +G++yL+++ ++Hrdl a N+Ll+ + ++kisDfG+++++ +     ++++ + +v WmapE+++++   ++ k D+
   KHJ30274.1 1449 H--GKFEEMVVSSLTRQTLSGLAYLHREGILHRDLKADNILLDLDGTCKISDFGISKKTDNIYGNDASNSMQGSVFWMAPEVVRSRGqgYSAKVDI 1542
                   9..99******************************************************66666688899999**********998778******* PP

                   HHHHHHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BBTTSBHHHHHH....HHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr  189 WsfGvllwEiftlgespypglkneevlekl.kegkrlekpekcpeelyel....mkkcweedpeeRptfselv 256 
                   Ws G ++ E+f  g++p+++ +   ++ kl + ++  + p+++ +++  +    m +c++ dp+eRp   +l+
   KHJ30274.1 1543 WSLGCVVLEMFA-GRRPWSKEEIVGAIYKLgSLNEAPPIPDDVANAISPIavafMADCFTIDPSERPIADTLL 1614
                   ***********9.*****999666555555488888999999999987544445*************877765 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   0.00018      0.54      15      68 ..    1351    1404 ..    1341    1423 .. 0.86
   2 !   28.7   0.0   2.6e-10   7.7e-07     137     254 ..    1448    1563 ..    1424    1589 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00018
  Kinase-like   15 vrgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlkeqelairl 68  
                    +g+l++kg  + v++  +  tge lavk+  + ++a+  d ++++e + a+ +
   KHJ30274.1 1351 FKGQLIGKGTYGRVYLGMNATTGEFLAVKQVEVSAKAAGYDKDKMREMVAALDQ 1404
                   689*******************************************98877765 PP

  == domain 2  score: 28.7 bits;  conditional E-value: 2.6e-10
  Kinase-like  137 thkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvl.seve....kgfaPpEllgsrggytrknktkm 227 
                   +h k e++    lT q +   a+L+ +g++h ++++dn+lld +g  ++ +f+   +  + +   +++     + +  pE++ srg+        +
   KHJ30274.1 1448 KHGKFEEMVVSSLTRQTLSGLAYLHREGILHRDLKADNILLDLDGTCKISDFGISKKTDNIYGNdASNSmqgsVFWMAPEVVRSRGQ-------GY 1536
                   47778888888999999999********************************98877655554222222334555789999999887.......78 PP

  Kinase-like  228 thkldaWqlGlviyriwclklPltlat 254 
                   + k+d W lG v++ + +   P  + +
   KHJ30274.1 1537 SAKVDIWSLGCVVLEMFAGRRPWSKEE 1563
                   89**************99998887654 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   8.7e-06     0.026     106     166 ..    1443    1499 ..    1429    1509 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.7e-06
         Kdo  106 edllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDl 166 
                    +l+k+ +++e +   l +++    a lhr g+ H+dl a nill+ ++    ++ + D+
  KHJ30274.1 1443 GSCLRKHGKFEEMVVSSLTRQTLSGLAYLHREGILHRDLKADNILLDLDG----TCKISDF 1499
                  5678888888888888888999999999*******************998....5555555 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1      0.81   2.4e+03     126     181 ..    1142    1202 ..    1127    1212 .. 0.59
   2 ?   11.4   0.0   7.6e-05      0.23     162     184 ..    1466    1493 ..    1399    1506 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.81
                  HHHHHCHHH..CCCGCCTCC....HHHHHHHHHHHHHHHH--SSS-EEEE-SS-SGGGEEEC CS
         APH  126 lrqlesata..rllaselld....lleeleeqvlaalaallpgelptvllHgDlhpgNllvd 181 
                  +r++e++ +  + +a e ++    +l+++ + +++ ++a++p+  +  + H D   +Nl +d
  KHJ30274.1 1142 NRDIENQSRsqNVKATESQEeidaKLQRRKSFAREDVWANRPP-AESLIDHLDAFFPNLDLD 1202
                  4444444442022222222233344555555599999999994.555555999888888666 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 7.6e-05
                  S....SS-EEEE-SS-SGGGEEEC...T CS
         APH  162 g....elptvllHgDlhpgNllvd.pdd 184 
                  +      ++++lH+Dl+ +N+l+d ++ 
  KHJ30274.1 1466 SglayLHREGILHRDLKADNILLDlDGT 1493
                  34555679****************5444 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   1.6      0.78   2.3e+03     199     282 ..     322     404 ..     284     436 .. 0.59
   2 ?   12.5   2.2   1.5e-05     0.046     294     388 ..    1441    1531 ..    1079    1550 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.78
  Pkinase_fungal 199 vegvarlvahedveekdddi.aeiRkgldvtkaekfrskrkvvsssssqelsskaevklkksesskkvekrsvdssvstskrsrl 282
                     v+g+ + v+   ++e+  +   ++++++ +t +   +++  ++ +s+++++++   +k+k+++s k+ ++  ++s++s++ r+++
      KHJ30274.1 322 VSGLHQSVSTDGIQESSPSLsRKLQNSTPITAN--TEDESPMLGRSGNSNSERGFTTKTKNRTSIKNSTNLDSESTNSAQTRNNF 404
                     455555555555554444443333333333333..33444555555555555555555555555555555555555555555554 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 1.5e-05
  Pkinase_fungal  294 pvGkpiekaespkellea..lrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaie 384 
                      +vG  ++k ++ +e++ +   r+ + g+  L+   giLHrD  ++Nil+       + +  ++D+ + k++++   +++++   G + +ma e
      KHJ30274.1 1441 SVGSCLRKHGKFEEMVVSslTRQTLSGLAYLH-REGILHRDLKADNILLD-----LDGTCKISDFGISKKTDNIYGNDASNSMQGSVFWMAPE 1527
                      56666666666666653311478899999***.****************9.....6788889**********999999999************ PP

  Pkinase_fungal  385 vlkg 388 
                      v++ 
      KHJ30274.1 1528 VVRS 1531
                      9995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1641 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       954  (0.0532099); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.98u 0.27s 00:00:01.25 Elapsed: 00:00:00.42
# Mc/sec: 11703.21
//
Query:       KHJ30275.1  [L=125]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.013   16.0   0.1       0.02   15.4   0.1    1.3  1  EF-G-binding_N  Elongation factor G-binding protein, N-termin


Domain annotation for each model (and alignments):
>> EF-G-binding_N  Elongation factor G-binding protein, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.1   1.1e-06      0.02      18      65 ..      42     113 ..      37     118 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.1e-06
  EF-G-binding_N  18 lnayrsvnDkkvveavkalaae.kIlel.......................fpelseeqkelLeqiddiktk 65 
                     +++yr++ D++  +av+a aae k+ e+                       +pe se+++el++++d++++k
      KHJ30275.1  42 VKVYRQAGDREFQAAVRARAAEgKVSEMealigntgngnpipeankttiifVPEISEADEELIHTVDNVTQK 113
                     89****************987669********************************************9955 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       810  (0.0451782); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 976.18
//
Query:       KHJ30276.1  [L=260]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       794  (0.0442858); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1898.70
//
Query:       KHJ30277.1  [L=247]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 1925.37
//
Query:       KHJ30278.1  [L=423]
Description: hypothetical protein EV44_g1186 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.081   12.7   0.2       0.12   12.2   0.2    1.2  1  DUF588    Domain of unknown function (DUF588)


Domain annotation for each model (and alignments):
>> DUF588  Domain of unknown function (DUF588)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   6.6e-06      0.12       7     147 ..     269     405 ..     265     408 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6.6e-06
      DUF588   7 aelvLRlaavvlalaaavvmatnkqtkevfkiqveakfsdlpafvylvvanaiaavYsllqlvlsvvslvrkk...ersaalalllfllDqvlayllls 102
                 + l++Rl+++ ++++a+  +at+ +      ++v+ +++++p+ ++ +++ ++a  Y l  +  +      +k    r++ + + l+llD+ + +   +
  KHJ30278.1 269 VPLLFRLIVLSTSIIALG-IATSVH-----YLSVKYNYEQTPSSTMAIGVDVVALPYILYITWDEYT----GKplgLRAPGAKIRLVLLDLFFIIFESA 357
                 678999999999999985.466666.....6889***********************9998888874....44467999999********999999988 PP

      DUF588 103 AasAaaavv.yla.kkgnseaqWlk.iCnqfgkFcervaaavalsfla 147
                   s a+++  +      ns  +++  iCn +++ c    +a+ +  l+
  KHJ30278.1 358 NLSLAFGALtDDNgSCENSVYGYNYiICNRVKALCGILMLALYAWSLT 405
                 888777654144323344455566578999999998888777665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       650  (0.0362541); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 3330.04
//
Query:       KHJ30279.1  [L=1541]
Description: putative multidrug resistance-associated protein 1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-88  296.8  32.2    2.3e-48  165.2  11.6    2.9  3  ABC_membrane  ABC transporter transmembrane region
    8.1e-51  172.1   4.7      1e-29  103.8   0.2    2.9  2  ABC_tran      ABC transporter
    9.2e-09   35.1   0.0    0.00045   19.7   0.0    3.5  2  SMC_N         RecF/RecN/SMC N terminal domain
    7.1e-06   26.1   0.2       0.15   12.2   0.0    3.1  2  MMR_HSR1      50S ribosome-binding GTPase
    7.9e-05   22.6   0.2      0.053   13.4   0.0    2.6  2  RsgA_GTPase   RsgA GTPase
    0.00023   20.8   0.7       0.13   12.0   0.0    3.0  3  AAA_29        P-loop containing region of AAA domain
    0.00048   20.5   0.1       0.19   12.1   0.1    2.7  2  AAA_16        AAA ATPase domain
    0.00098   19.7   9.2     0.0026   18.3   0.0    3.6  4  AAA_23        AAA domain
  ------ inclusion threshold ------
      0.011   14.0   2.3      0.018   13.3   2.3    1.2  1  CDC45         CDC45-like protein
      0.029   14.6   1.8        2.6    8.3   0.2    3.2  3  AAA_22        AAA domain
      0.029   14.1   0.3        1.8    8.2   0.0    3.0  2  AAA_30        AAA domain
      0.053   13.6   0.1       0.35   11.0   0.1    2.4  1  DUP           DUP family
      0.075   12.8   0.0         16    5.2   0.0    2.6  2  IstB_IS21     IstB-like ATP binding protein
       0.18   11.3   0.1         23    4.5   0.1    2.4  2  AAA_25        AAA domain
       0.38   10.8   5.0        3.5    7.7   0.0    3.0  3  Dynamin_N     Dynamin family
       0.47   10.7   3.4         37    4.5   0.0    3.7  3  Roc           Ras of Complex, Roc, domain of DAPkinase
       0.48   10.2   0.0       0.48   10.2   0.0    3.5  4  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
        4.7    7.3   9.1        3.6    7.6   4.8    2.8  2  UPF0242       Uncharacterised protein family (UPF0242) N-term


Domain annotation for each model (and alignments):
>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.7       3.3   3.3e+03      11      48 ..     111     146 ..      89     160 .. 0.56
   2 !  143.8   5.2   8.1e-45   8.1e-42       6     274 .]     316     589 ..     311     589 .. 0.97
   3 !  165.2  11.6   2.3e-51   2.3e-48       1     273 [.     974    1246 ..     974    1247 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 3.3
                   HHHHHHHHHHHHHHHHHHHHSSTCCHHHHHHHHHHHHH CS
  ABC_membrane  11 agvlsplfplvlgrildtlldkgdpetealnvysllll 48 
                     +ls+l  l +++ ++t +++ d++   ln ++++  
    KHJ30279.1 111 FIGLSVLLQLSFQYTVSTNTSFVDSRL--LNCVLMIAS 146
                   334444444455555555555444444..444444444 PP

  == domain 2  score: 143.8 bits;  conditional E-value: 8.1e-45
                   HHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHH....HHHHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHCSTHHHHHHSC CS
  ABC_membrane   6 llailagvlsplfplvlgrildtlldkgdpet....ealnvysllllllglaqfilallqsyll..nvtgerlskrlrrklfkkilrqpmsffdtns 96 
                   l++i+++ l++++p +l  ++ ++ ++++++       +  + ++++++++ ++++ +l++y+     tg+r++++l + ++ k l+++ +  +++s
    KHJ30279.1 316 LFKICSDSLAFVQPQLLRLLITFIGSHKKSNPgppqPIIHGVVIAIAMFAVSVGQTITLHQYFQraFDTGMRIKSALTSAIYGKSLKLSNEGRSSKS 412
                   799***********************9888888899899999999999999999999*******7666***************************** PP

                   HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH CS
  ABC_membrane  97 vGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgirtV 193
                   +G++++ ++ d+++l+d++++   l++ + +++++++ ++ +lg+++ ++++++++l+i+++ +ia+++k+l+++++k+ + +++++ E++++++ +
    KHJ30279.1 413 TGDIVNYMAVDTQRLQDLTQYGQQLWSAPYQILLCSISLYNLLGPSM-FAGVGVMILMIPINGLIARLMKTLQQQQMKNKDSRTKLISEIINNMKSI 508
                   *********************************************97.************************************************* PP

                   HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHHH CS
  ABC_membrane 194 kafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailfgal 274
                   k++++ ++f +k +  +++ + ++++k+ a++ +  +t++ + +++++a++  ++lv ++ l+ + ++  l+lf++l+++l
    KHJ30279.1 509 KLYAWGSAFMKKLHSIRNDQELKTLRKIGAASSVANFTWSTTPFLVSCATFTVFVLVCDKPLTTDIVFPALTLFNLLTFPL 589
                   *****************************************************************************9986 PP

  == domain 3  score: 165.2 bits;  conditional E-value: 2.3e-51
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHCSTHHHHHH CS
  ABC_membrane    1 liliillailagvlsplfplvlgrildtlldkgdpetealnvysllllllglaqfilallqsyll.nvtgerlskrlrrklfkkilrqpmsffdt 94  
                    +i++ l+++ a+ +s++ +++l+r+ ++  +++++    + + + +++++g++ ++l+++q+ +l + +++ +s++l+ +++ +i+r pmsff+t
    KHJ30279.1  974 VIMYGLMLVGAQTASVAGNFWLKRWAEINDSQNSNPH--VGKNLGIYFAFGIGGSLLVVIQTLILwIFCSIEASRKLHDMMVYAIFRSPMSFFET 1066
                    68999************************99999988..***********************998799*************************** PP

                    SCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
  ABC_membrane   95 nsvGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsg 189 
                    +++G++l+r+++d+++++++l++++ ++f + +  + +liv+ ++ + + +v+++++ l+++++ ++ +++++lk+ ++ ++++++++++Eslsg
    KHJ30279.1 1067 TPAGRILNRFSSDIYRVDEVLARTFNMLFVNTARSIFTLIVISLSTPEFIVVIIPMAALYYWIQRYYLRTSRELKRLDSVSRSPIYAHFQESLSG 1161
                    *********************************************************************************************** PP

                    HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT.SSTHHHHHHHHHHHHHHHHH CS
  ABC_membrane  190 irtVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisg.elsvgdlvvflslfailfga 273 
                    + t++a++++++f+++ e  ++++++a++ +++an++l ++++++g+++++ a+ f++  vi g els g +   +s++ +++++
    KHJ30279.1 1162 LATIRAYRHQQRFIQENEIRVDTNLRAYFPSINANRWLAIRLEFIGSVIIFSAAGFSIISVIIGrELSDGMVGLAMSYALQITQS 1246
                    *********************************************************9999996599999999999999999887 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.7   0.0   3.5e-22   3.5e-19       1     136 [.     655     789 ..     655     790 .. 0.90
   2 !  103.8   0.2     1e-32     1e-29       1     137 []    1313    1461 ..    1313    1461 .. 0.95

  Alignments for each domain:
  == domain 1  score: 69.7 bits;  conditional E-value: 3.5e-22
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.............HHHTCHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............xxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.............esdeeie 86 
                 l++++l++++ge++ i+G+ GaGKS+Ll++++g l + +Ge+             +++ +++++ q++ + + + v+en             +  + ++
  KHJ30279.1 655 LEDINLSVSKGELTCIFGRVGAGKSSLLQAFTGDLWKVKGEV-------------VVHGKVAYVAQQSWIMNAS-VKENilfghrfdpsfyiKTIRACA 739
                 689***************************************.............899*********8888888.*********999999854444455 PP

                 HHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  87 kalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpt 136
                  + +  +l++ ++t v++++ sLSgGqk rv lara+  +++++llD++ 
  KHJ30279.1 740 LVDDFAQLPDGDETQVGERGISLSGGQKARVNLARAVYARADIYLLDDCL 789
                 55555667778899*********************************975 PP

  == domain 2  score: 103.8 bits;  conditional E-value: 1e-32
                  EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH......HHHTCHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxx RF
    ABC_tran    1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren......esdeeiekalsk 91  
                  lkn++l++k +ek+++vG++GaGKS+L   l +  +pteG+i +dg +++++ l  lr++++++pq++ lf+++ v +n      +++ e+  +l++
  KHJ30279.1 1313 LKNINLSIKSNEKIGVVGRTGAGKSSLTLSLFRIIEPTEGNISIDGLNTSSIGLLDLRRRLAIIPQDAALFEGT-VWDNldpghvHDETELWSVLDQ 1408
                  79************************************************************************.**********999999999999 PP

                  STTGG.......TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                  xxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   92 lglke.......lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137 
                   +lk+         + ++++++s+LS+Gq+q v+larall  +++l+lDE+ta
  KHJ30279.1 1409 ARLKDhistmngGLEAKIQEGGSNLSQGQRQLVSLARALLAPSNILVLDEATA 1461
                  9999999999995566667999*****************************96 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00049      0.48      92     178 ..     618     799 ..     598     812 .. 0.83
   2 !   19.7   0.0   4.5e-07   0.00045     135     210 ..     935    1503 ..     850    1509 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00049
                 SSSSCEEEEEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT....................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................................................... RF
       SMC_N  92 iekeevsisrrvkrkgeseykingkevtkkevsellesagiske....................................................... 135
                  +++ v+i+  +++ ge ++ i + + t + +s+  e ++i+ +                                                       
  KHJ30279.1 618 LQDDAVTIKGAIEEIGEESVLIRDGTFTWNRYSDHNELEDINLSvskgeltcifgrvgagkssllqaftgdlwkvkgevvvhgkvayvaqqswimnasv 716
                 457788888888899999999999888888887766656665556699999999999999999999999999999999999999999999999999999 PP

                 ............................................CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHH CS
                 ............................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 136 ............................................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkk 178
                                                             +LSgG+k+ v la       + +a +yllD+  +a D++  + 
  KHJ30279.1 717 kenilfghrfdpsfyiktiracalvddfaqlpdgdetqvgergiSLSGGQKARVNLA----RAVYARADIYLLDDCLSAVDQHVGRH 799
                 9999999999999999999999999999999999999999999999***99977664....56789999999999999999876554 PP

  == domain 2  score: 19.7 bits;  conditional E-value: 4.5e-07
                  T................................................................................................ CS
                  x................................................................................................ RF
       SMC_N  135 e................................................................................................ 135 
                  +                                                                                                
  KHJ30279.1  935 Ktqdeesgnktkqseesmeqgkvkldvyleyaktsnisavimyglmlvgaqtasvagnfwlkrwaeindsqnsnphvgknlgiyfafgiggsllvvi 1031
                  1444445555666666666666666677777777777777777777778888888888888888888888888888888888888888888888888 PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30279.1 1032 qtlilwifcsieasrklhdmmvyaifrspmsffettpagrilnrfssdiyrvdevlartfnmlfvntarsiftlivislstpefivviipmaalyyw 1128
                  8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30279.1 1129 iqryylrtsrelkrldsvsrspiyahfqeslsglatirayrhqqrfiqeneirvdtnlrayfpsinanrwlairlefigsviifsaagfsiisviig 1225
                  8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30279.1 1226 relsdgmvglamsyalqitqslnwivrqsvevetnivsverileygrlpseapeiihrnrppnswptagsvqfenystryreglepvlkninlsiks 1322
                  8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888889 PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30279.1 1323 nekigvvgrtgagkssltlslfriieptegnisidglntssiglldlrrrlaiipqdaalfegtvwdnldpghvhdetelwsvldqarlkdhistmn 1419
                  99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999***** PP

                  ............CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHH.HHCTTSEEEEE-SSHHHCCC-SCEEE CS
                  ............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  136 ............lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellk.eksknaQfivislreemlekadklvg 210 
                              +LS G+++Lv+la         p+ + +lDe  aa D +  + + + l+    +n  +i i++r +++ ++d++v 
  KHJ30279.1 1420 ggleakiqeggsNLSQGQRQLVSLARA----LLAPSNILVLDEATAAVDVQTDALIQTTLRgPMFSNRTIITIAHRINTILDSDRIVV 1503
                  **********************99754....578***************************667789999********9999998875 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   0.00015      0.15       3      26 ..     669     692 ..     667     708 .. 0.85
   2 !   10.4   0.1   0.00051      0.51       1      21 [.    1325    1345 ..    1325    1357 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00015
                 EEEESTTSSHHHHHHHHHTSTEEE CS
    MMR_HSR1   3 aivGrpNvGKStLinaltgekaiv 26 
                 +i+Gr  +GKS+L++a tg+  +v
  KHJ30279.1 669 CIFGRVGAGKSSLLQAFTGDLWKV 692
                 79****************975444 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00051
                  EEEEEESTTSSHHHHHHHHHT CS
    MMR_HSR1    1 evaivGrpNvGKStLinaltg 21  
                  ++++vGr+ +GKS+L  +l++
  KHJ30279.1 1325 KIGVVGRTGAGKSSLTLSLFR 1345
                  699************988875 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   5.4e-05     0.053      85     123 ..     650     689 ..     599     702 .. 0.83
   2 !    6.3   0.0     0.008       7.9      97     121 ..    1320    1345 ..    1296    1361 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 5.4e-05
                  TTHTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT- CS
  RsgA_GTPase  85 ktkegleelkellkd.ktsvlvGqSGvGKStLinallpel 123
                  +++++le+++  +++ +++++ G  G+GKS+L+ a++++l
   KHJ30279.1 650 SDHNELEDINLSVSKgELTCIFGRVGAGKSSLLQAFTGDL 689
                  4568889998887777******************999875 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.008
                   CTT.SEEEEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase   97 lkd.ktsvlvGqSGvGKStLinallp 121 
                   +k+ + + +vG +G+GKS+L  +l  
   KHJ30279.1 1320 IKSnEKIGVVGRTGAGKSSLTLSLFR 1345
                   4443556689**********877765 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       5.1   5.1e+03       2      14 ..     506     518 ..     505     530 .. 0.67
   2 !   12.0   0.0   0.00013      0.13      17      42 ..     660     685 ..     644     689 .. 0.76
   3 ?    5.7   0.1     0.012        12      18      38 ..    1319    1339 ..    1313    1353 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 5.1
      AAA_29   2 krlqlvNWgtfdg 14 
                 k+++l+ Wg+   
  KHJ30279.1 506 KSIKLYAWGSAFM 518
                 789******8543 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 0.00013
      AAA_29  17 ieidlkg.atlltGpsGsGKSTllDAi 42 
                 ++++ kg  t + G+ G+GKS+ll A+
  KHJ30279.1 660 LSVS-KGeLTCIFGRVGAGKSSLLQAF 685
                 3444.3469***************997 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.012
      AAA_29   18 eidlkgatlltGpsGsGKSTl 38  
                  +i+ ++ + ++G++G+GKS+l
  KHJ30279.1 1319 SIKSNEKIGVVGRTGAGKSSL 1339
                  5555567789*********98 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.022        22      20      46 ..     663     687 ..     652     758 .. 0.81
   2 !   12.1   0.1    0.0002      0.19      28     161 ..    1327    1477 ..    1309    1486 .. 0.59

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.022
      AAA_16  20 rsgrpelvllsGesGvGKsslvrellr 46 
                 ++g  el+ + G  G GKssl++++  
  KHJ30279.1 663 SKG--ELTCIFGRVGAGKSSLLQAFTG 687
                 444..78899************99974 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 0.0002
      AAA_16   28 llsGesGvGKsslvrellralekdg.giflrgkcdqlesaipysalaqalareellrqllde...............aesaeleawrekleeala.. 106 
                   ++G  G GKssl  +l+r +e ++  i + g ++++         + +l+ ++ l+ + ++               +  +e e w+   +++l+  
  KHJ30279.1 1327 GVVGRTGAGKSSLTLSLFRIIEPTEgNISIDGLNTSS---------IGLLDLRRRLAIIPQDaalfegtvwdnldpgHVHDETELWSVLDQARLKdh 1414
                  599***************9999996234466666666.........444445566666666644465544444444433333344444333333365 PP

      AAA_16  107 .......avpelagaea.......srllellkrllallsrderp.lvlvlDdlqwadeaslql.laaLlrl 161 
                                  +       s l +  ++l++l++    p  +lvlD++  a + + ++ ++++lr 
  KHJ30279.1 1415 istmnggL--------EakiqeggSNLSQGQRQLVSLARALLAPsNILVLDEATAAVDVQTDAlIQTTLRG 1477
                  55544330........23444566444444444444444444444699***99977666655558887776 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0         6     6e+03     169     169 ..     477     477 ..     390     532 .. 0.57
   2 !   18.3   0.0   2.6e-06    0.0026      13      45 ..     656     691 ..     646     733 .. 0.83
   3 ?   -0.2   2.7       1.2   1.2e+03     128     190 ..     873     947 ..     815     970 .. 0.51
   4 ?    2.9   0.2      0.14   1.4e+02      21      35 ..    1325    1339 ..    1312    1344 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 6
      AAA_23 169 k 169
                 +
  KHJ30279.1 477 A 477
                 0 PP

  == domain 2  score: 18.3 bits;  conditional E-value: 2.6e-06
      AAA_23  13 qeidF...skgltlItGpNGaGKTTildAiklaLyg 45 
                 ++i++   +  lt+I+G  GaGK+++l+A++  L+ 
  KHJ30279.1 656 EDINLsvsKGELTCIFGRVGAGKSSLLQAFTGDLWK 691
                 34888774557******************9976665 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 1.2
      AAA_23 128 kkiilnlilflgqerfeefel....kdkkerleelekeleeledekkllekl........eqekekekeleelee 190
                 ++i+++l++ + ++++e ++     +d + +l++ e  +++ +  k+ l +          q+ + e+  ++ ++
  KHJ30279.1 873 SEISSSLSSTITEGDNETKSSdqgsSDHQTELKSTESRFRQRKHSKSSLSNAslasikrfRQKTQDEESGNKTKQ 947
                 223333333333333211111222222222444444444444444444443344444443222222221111111 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.14
      AAA_23   21 ltlItGpNGaGKTTi 35  
                     ++G +GaGK+++
  KHJ30279.1 1325 KIGVVGRTGAGKSSL 1339
                  55789********98 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   2.3   1.8e-05     0.018     137     238 ..     873     980 ..     792     992 .. 0.49

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.8e-05
       CDC45 137 e.......eeeeeddddeeeeeeeeedeedeeedeeeskkkrk.sksdeeeesddddersrkrrrsepsakklrrqlkkerrkyeavlekyysqgtsyg 227
                 +       ++  e d++++++++ ++d+++e +++e++ ++rk sks+ +++s  + +r r+++++e  ++  + ++ +e  ++ +v  + y +++  +
  KHJ30279.1 873 SeissslsSTITEGDNETKSSDQGSSDHQTELKSTESRFRQRKhSKSSLSNASLASIKRFRQKTQDE--ESGNKTKQSEESMEQGKVKLDVYLEYAKTS 969
                 0122222111111111111222222222222222222222222122222222222233333333333..333333344555555566777777889999 PP

       CDC45 228 esvsslmYsLa 238
                 + ++++mY L+
  KHJ30279.1 970 NISAVIMYGLM 980
                 999*****986 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.2    0.0026       2.6       5      26 ..     665     686 ..     661     701 .. 0.87
   2 ?    3.3   0.0     0.094        93      10      27 ..    1328    1345 ..    1321    1376 .. 0.86
   3 ?   -0.8   0.0       1.7   1.7e+03      74     102 ..    1435    1461 ..    1407    1487 .. 0.67

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0026
      AAA_22   5 agilvvtGesGtGKTtllrrll 26 
                   +++++G +G+GK+ ll+ ++
  KHJ30279.1 665 GELTCIFGRVGAGKSSLLQAFT 686
                 56899**************987 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.094
      AAA_22   10 vtGesGtGKTtllrrlle 27  
                  v+G +G+GK+ l   l++
  KHJ30279.1 1328 VVGRTGAGKSSLTLSLFR 1345
                  89********99887766 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.7
      AAA_22   74 sseellealeqalraravielliiDEaqh 102 
                  + ++ l  l++al a +   +l++DEa  
  KHJ30279.1 1435 QGQRQLVSLARALLAPS--NILVLDEATA 1461
                  33333334444455554..59*****976 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0    0.0018       1.8      16      53 ..     663     706 ..     658     753 .. 0.77
   2 ?    2.0   0.3      0.14   1.4e+02      23     109 ..    1328    1471 ..    1316    1477 .. 0.49

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0018
      AAA_30  16 sgdrvavltGpAGtGKttalkal.reaweaag.....grviglA 53 
                 s+  ++++ G+ G+GK+ +l+a   ++w+ +g     g+v+ +A
  KHJ30279.1 663 SKGELTCIFGRVGAGKSSLLQAFtGDLWKVKGevvvhGKVAYVA 706
                 555699****************9668888887344443443333 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.14
      AAA_30   23 ltGpAGtGKttalkalreaweaa.g.grviglAptgkaAkvLaeelgi...eastiakllkrlk................................. 81  
                  ++G+ G+GK+ +  +l +++e   g  ++ gl  ++    +L++ l i   +a+  +  +   +                                 
  KHJ30279.1 1328 VVGRTGAGKSSLTLSLFRIIEPTeGnISIDGLNTSSIGLLDLRRRLAIipqDAALFEGTVW--Dnldpghvhdetelwsvldqarlkdhistmnggl 1422
                  6788888888776666666655523344445555554444444444432222222222221..1123333333333333444444444444444455 PP

      AAA_30   82 .....................grarlepgtllivDEagmvdtkqlaall 109 
                                       +ra l+p+++l+ DEa  +   q++al+
  KHJ30279.1 1423 eakiqeggsnlsqgqrqlvslARALLAPSNILVLDEATAAVDVQTDALI 1471
                  5555555555555555555665566666677777777666655655555 PP

>> DUP  DUP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   0.00035      0.35      10      58 ..     465     513 ..     457     516 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00035
         DUP  10 vlvllilllva..lvlqnlra.fsksvsdekfkikllseiikekpavdakeW 58 
                 v++l+i       l+  ++++   +++++++ ++kl+seii++  +++   W
  KHJ30279.1 465 VMILMIP---IngLIARLMKTlQQQQMKNKDSRTKLISEIINNMKSIKLYAW 513
                 3333333...2343333333314788999********************999 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.026        26      22      73 ..     642     691 ..     635     714 .. 0.73
   2 ?    5.2   0.0     0.016        16      44      67 ..    1320    1343 ..    1297    1348 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.026
   IstB_IS21  22 idfraarsldkrkvkeLatlsfiekkenivllGpsGvGKshlaialgveavr 73 
                   f+ +r +d+++++++     ++k e  +++G  G+GKs l  a+  +  +
  KHJ30279.1 642 GTFTWNRYSDHNELEDINL--SVSKGELTCIFGRVGAGKSSLLQAFTGDLWK 691
                 5566666666666666543..2789999**************9999876655 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.016
   IstB_IS21   44 iekkenivllGpsGvGKshlaial 67  
                  i+++e i ++G +G+GKs l+ +l
  KHJ30279.1 1320 IKSNEKIGVVGRTGAGKSSLTLSL 1343
                  788999**************9987 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1     0.023        23      31      77 ..     663     705 ..     656     708 .. 0.80
   2 ?    4.1   0.0     0.031        31      31      53 ..    1321    1343 ..    1302    1348 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.023
      AAA_25  31 pagelallaGapgtGKttlaldlalavatGkpwlgpvapeqgkVlyv 77 
                  +gel+ ++G+ g+GK+ l+     ++ + k   g+ ++ +gkV yv
  KHJ30279.1 663 SKGELTCIFGRVGAGKSSLLQAFTGDLWKVK---GE-VVVHGKVAYV 705
                 689****************998877777555...44.3677888777 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.031
      AAA_25   31 pagelallaGapgtGKttlaldl 53  
                    +e + ++G++g+GK+ l+l+l
  KHJ30279.1 1321 KSNEKIGVVGRTGAGKSSLTLSL 1343
                  556777799************98 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0    0.0035       3.5       3      25 ..     670     692 ..     669     719 .. 0.85
   2 ?   -2.2   0.8       3.7   3.7e+03      53      84 ..     915     948 ..     861     980 .. 0.60
   3 ?    4.1   0.0     0.044        44       1      15 [.    1326    1340 ..    1326    1351 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0035
                 EEEBTTTTHHHHHHHHHTS--S- CS
   Dynamin_N   3 vvGsqSsGKSSvlnaLlgedilp 25 
                 ++G + +GKSS+l a +g+   +
  KHJ30279.1 670 IFGRVGAGKSSLLQAFTGDLWKV 692
                 89*************99976555 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3.7
                 SSEEEE..T-EB--CHHHHHHHHHHHHHHHTSSS CS
   Dynamin_N  53 eelkek..ekkledfsevreeieketekiagank 84 
                 ++ k+   ++ l +++++r++ ++e++ ++++++
  KHJ30279.1 915 KHSKSSlsNASLASIKRFRQKTQDEESGNKTKQS 948
                 2222223344444444444444444444333333 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.044
                  EEEEEBTTTTHHHHH CS
   Dynamin_N    1 iavvGsqSsGKSSvl 15  
                  i vvG + +GKSS+ 
  KHJ30279.1 1326 IGVVGRTGAGKSSLT 1340
                  79***********95 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1       2.5   2.4e+03      30      72 ..     487     524 ..     475     527 .. 0.56
   2 ?    4.5   0.0     0.038        37       3      27 ..     669     693 ..     668     720 .. 0.79
   3 ?    4.4   0.1     0.043        42       1      20 [.    1325    1344 ..    1325    1364 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2.5
                 TTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT CS
         Roc  30 stigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrsl 72 
                 ++   d  tk +   +++   +++k++kl  W  a  ++ +s+
  KHJ30279.1 487 QMKNKDSRTKLI---SEI--INNMKSIKLYAWGSAFMKKLHSI 524
                 333333334433...222..23468899999988888887776 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.038
                 EEESSTTSSHHHHHHCHCT-CCC-E CS
         Roc   3 vlvGdsgvGKtsllkrfvedkfsek 27 
                 ++ G  g+GK+sll+ f+ d  + k
  KHJ30279.1 669 CIFGRVGAGKSSLLQAFTGDLWKVK 693
                 578999***********98866655 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.043
                  EEEEESSTTSSHHHHHHCHC CS
         Roc    1 KvvlvGdsgvGKtsllkrfv 20  
                  K+ +vG +g+GK+sl  ++ 
  KHJ30279.1 1325 KIGVVGRTGAGKSSLTLSLF 1344
                  8999***********98765 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00048      0.48       1      19 [.     667     685 ..     667     691 .. 0.93
   2 ?   -1.6   0.5       1.9   1.9e+03      55     148 ..     872     962 ..     856     968 .. 0.66
   3 ?    1.5   0.3      0.21   2.1e+02       3      40 ..    1327    1358 ..    1326    1374 .. 0.68
   4 ?   -1.5   0.0       1.7   1.7e+03     236     265 ..    1432    1458 ..    1430    1458 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00048
      AAA_21   1 lnvliGpNgsGKSnLLdal 19 
                 l+++ G+ g+GKS+LL+a+
  KHJ30279.1 667 LTCIFGRVGAGKSSLLQAF 685
                 699***************9 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.9
      AAA_21  55 eipfefeieeflsqgvryryglrlersqveeklssvetllesgllldkrsleeedvfnpeargirggvsvfslkelsvsepndlqfgkaltdit 148
                 ++++  +++ + ++g + + + +++ s++    ++++++++++  ++ +     +++ +  +++r   +++++ ++++ +++++++gk+ +d++
  KHJ30279.1 872 SSEISSSLSSTITEGDNETKSSDQGSSDH---QTELKSTESRFRQRKHSKSSLSNASLASIKRFRQKTQDEESGNKTKQSEESMEQGKVKLDVY 962
                 55555555556666777777777777777...66666666666666666667777777777777777777777777777777777777777765 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.21
      AAA_21    3 vliGpNgsGKSnLLdaldllarldrdvegltdelsggg 40  
                  +++G+ g+GKS+L   l      +r +e++  + s  g
  KHJ30279.1 1327 GVVGRTGAGKSSLTLSL------FRIIEPTEGNISIDG 1358
                  68***********8877......444555555554444 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 1.7
      AAA_21  236 elSdGtkrllalltallralkkgsllliDE 265 
                  +lS+G+++l  l+ all+      +l++DE
  KHJ30279.1 1432 NLSQGQRQLVSLARALLAPS---NILVLDE 1458
                  69*******99999999877...8999999 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.7   1.7e+03      35      66 ..     358     392 ..     341     439 .. 0.68
   2 ?    7.6   4.8    0.0036       3.6      18     156 ..     817     964 ..     812     971 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.7
     UPF0242  35 llsiGlllaaaGsLlllllllkwekalkekl.....e 66 
                 +++i+++ +++G+   + l  ++++a ++++      
  KHJ30279.1 358 VIAIAMFAVSVGQT--ITLHQYFQRAFDTGMriksaL 392
                 57999********9..777777888877777554443 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0036
     UPF0242  18 llaiysiqllseqksWsllsiGl.........llaaaGsLlllllllkwekalkeklekskleekeaklteldeglktkeealeelqeeeeeLkeelda 107
                 ll++ si++lse +   ll  G+         l+a+ G++  l+++   +++++e   ++  ++  + +te d++ k  ++   + q e +  + ++ +
  KHJ30279.1 817 LLSTNSIPVLSEADYICLLQNGRivergtylqLMAMKGEISSLIMASGNQDQARE--SSEISSSLSSTITEGDNETKSSDQGSSDHQTELKSTESRFRQ 913
                 6899999999999999999999999999999999999999999999888888887..444445667899****99999999888888888888888877 PP

     UPF0242 108 keeelerlkeenq.qLqekleaiae.dfeelkleleeqLaekqellqeyqe 156
                 +++    l +    +++   ++++  +  +  +++ee +++ + +l+ y e
  KHJ30279.1 914 RKHSKSSLSNASLaSIKRFRQKTQDeESGNKTKQSEESMEQGKVKLDVYLE 964
                 77776666665543444433444332667788999******9999998755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1541 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1527  (0.0851693); expected 358.6 (0.02)
Passed bias filter:                      696  (0.0388198); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 1.13u 0.34s 00:00:01.47 Elapsed: 00:00:00.49
# Mc/sec: 9475.35
//
Query:       KHJ30280.1  [L=391]
Description: putative brca1 c terminus domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-37  126.7   0.0    4.9e-37  125.9   0.0    1.4  1  fn3_2      Fibronectin type III domain
    1.9e-24   85.3   0.6    3.1e-24   84.6   0.6    1.4  1  CHS5_N     Chitin biosynthesis protein CHS5 N-terminus
    1.3e-12   47.4   0.0    2.3e-12   46.7   0.0    1.4  1  PTCB-BRCT  twin BRCT domain
    5.4e-10   39.5   0.0    1.1e-09   38.5   0.0    1.6  1  BRCT       BRCA1 C Terminus (BRCT) domain
    5.3e-05   23.6   0.0    0.00011   22.5   0.0    1.5  1  BRCT_2     BRCT domain, a BRCA1 C-terminus domain
     0.0004   20.6   0.0     0.0011   19.2   0.0    1.7  1  DUF3006    Protein of unknown function (DUF3006)
  ------ inclusion threshold ------
      0.054   13.8   0.0       0.21   11.9   0.0    2.0  1  fn3        Fibronectin type III domain


Domain annotation for each model (and alignments):
>> fn3_2  Fibronectin type III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.9   0.0   1.9e-40   4.9e-37       2      89 .]      75     162 ..      74     162 .. 0.99

  Alignments for each domain:
  == domain 1  score: 125.9 bits;  conditional E-value: 1.9e-40
       fn3_2   2 kPkaPvlkvknvtqtsvvleWdklelataklksLslykngqrlgkipnplkntstKlsgLsvdteyefqlvlkttaGtyksekikvrt 89 
                 +P+aPvl+++n+tqts+vleWd ++lata++ sLsl++ngq++g+ip+p  ++stK+sgL +dtey+f+lvl+ttaGty+se++ vrt
  KHJ30280.1  75 QPAAPVLRCRNATQTSIVLEWDLVQLATADIISLSLFRNGQKAGNIPRPEVMQSTKISGLGIDTEYTFHLVLRTTAGTYNSERVMVRT 162
                 79************************************************************************************98 PP

>> CHS5_N  Chitin biosynthesis protein CHS5 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.6   0.6   1.2e-27   3.1e-24       2      48 .]       3      49 ..       2      49 .. 0.98

  Alignments for each domain:
  == domain 1  score: 84.6 bits;  conditional E-value: 1.2e-27
      CHS5_N  2 vtftvGKlDAglAiLltedahliEFPsvLLPegveaGSivdisvsrn 48
                +++tvGK+DAg+A+Llt+d++liEFPs+LLP+++++GSivdi+vsrn
  KHJ30280.1  3 ISLTVGKVDAGVAVLLTQDKRLIEFPSILLPPNISSGSIVDITVSRN 49
                589*******************************************9 PP

>> PTCB-BRCT  twin BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.7   0.0     9e-16   2.3e-12       9      63 .]     179     233 ..     171     233 .. 0.91

  Alignments for each domain:
  == domain 1  score: 46.7 bits;  conditional E-value: 9e-16
                 -TTCHHHHHHHHHHTT-EEESSEETT-SEEEECSS-CHHHHHHHHCT-EEE-CHH CS
   PTCB-BRCT   9 sgddrkslqklieamGaeyskdltksvTHLicksgeGekyekAkkwgipvVsveW 63 
                  ++ r+sl++ ie++Ga++ + ++ ++TH++ ++g+G+ +ekA+ ++ipvV++eW
  KHJ30280.1 179 PPQLRDSLTRAIERIGAKMADSVRIDTTHFVTTEGHGSAWEKAVDMNIPVVRPEW 233
                 4556*************************************************** PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.0   4.3e-13   1.1e-09       5      78 ..     167     237 ..     163     238 .. 0.90

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 4.3e-13
                 TTTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHH CS
        BRCT   5 lfhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgepesrslkylealklnipivheewlldc 78 
                  ++g+++   g l    rd+l + i+  G+k+ ++v  +tth+v+ e    ++ +++a + nip+v++ew+  c
  KHJ30280.1 167 DLSGITITP-GILPPQLRDSLTRAIERIGAKMADSVRIDTTHFVTTEG--HGSAWEKAVDMNIPVVRPEWIEGC 237
                 566666666.8899999*******************************..899******************887 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   4.4e-08   0.00011      19      84 ..     181     249 ..     176     250 .. 0.91

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 4.4e-08
      BRCT_2  19 psreklkklIeknGGevvetitsavyiviaesneee...laekrkrrvvspkyIkdCikkgkllpleny 84 
                 + r+ l++ Ie  G ++ ++ + +++++++++ + +   +a++ + +vv+p++I+ C + g+++ +++y
  KHJ30280.1 181 QLRDSLTRAIERIGAKMADSVRIDTTHFVTTEGHGSaweKAVDMNIPVVRPEWIEGCEAGGRIVGVRQY 249
                 6799********************9999999998889********************999999888777 PP

>> DUF3006  Protein of unknown function (DUF3006)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   4.2e-07    0.0011       5      64 ..       9      65 ..       5      67 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 4.2e-07
     DUF3006  5 RfEgdlAVleledgetidiprsdLpegakeGdvLeieddeieldpeetekrkeriqelld 64
                +++ ++AVl+++d++ i+ p  +Lp+++  G++++i+   ++ + + ++k+++   +l+d
  KHJ30280.1  9 KVDAGVAVLLTQDKRLIEFPSILLPPNISSGSIVDIT---VSRNFNSEQKAQANFLALQD 65
                67789********************************...77777777777666666555 PP

>> fn3  Fibronectin type III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   8.3e-05      0.21       6      80 ..      81     151 ..      76     156 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 8.3e-05
                 EEEEEESSSEEEEEEE-CSSSSSTEEEEEEEEEETTSTSTEEEEEECSTSSEEEEESSSTTEEEEEEEEEEETSE CS
         fn3   6 lsvsevtstsltvsWeppkdgggpitgYeveyrekgseeewneftvprtttsvtltgLkpgteYevrVqavnggg 80 
                 l++++ t ts++++W+  +   ++i + ++    +  +    ++  p+  +s +++gL  +teY++ +  ++++g
  KHJ30280.1  81 LRCRNATQTSIVLEWDLVQLATADIISLSLFRNGQKAG----NIPRPEVMQSTKISGLGIDTEYTFHLVLRTTAG 151
                 6788999**********986677777777744444333....45555555599****************999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       775  (0.0432261); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2780.46
//
Query:       KHJ30281.1  [L=449]
Description: putative vegetative cell wall protein gp1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.4    6.8   5.1        3.2    6.4   5.1    1.1  1  Presenilin  Presenilin


Domain annotation for each model (and alignments):
>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   5.1   0.00018       3.2     244     304 ..     209     269 ..     166     306 .. 0.45

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.00018
  Presenilin 244 kkeeasesskeeeseeesseksaqsseseeeseeesseaessaeesseekeseessessee 304
                 ++ee++  ++++++e++ +++++++s++ +++ +++++  s+ +++s++k+++++s++++e
  KHJ30281.1 209 EEEEEELVNQQQHEERQRNSRHRERSHKYKTRPASAAPRRSHGANPSTHKDRQRQSRHATE 269
                 1111111111111111111111111111111111111111111111111111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1365  (0.0761336); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.40
# Mc/sec: 3352.48
//
Query:       KHJ30282.1  [L=173]
Description: putative glycosyl [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.021   15.1   0.1       0.12   12.6   0.1    2.1  1  DUF2829   Protein of unknown function (DUF2829)


Domain annotation for each model (and alignments):
>> DUF2829  Protein of unknown function (DUF2829)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   6.8e-06      0.12      11      61 ..      21     122 ..      18     123 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 6.8e-06
     DUF2829  11 agkkvaRkgWngkemfivlvkgk....................................................egeeldvtpyiliktadeevvvgW 57 
                 ++k++ R++Wn+  +f++l+++                                                     ++++   t++  i+ a+ ++ ++W
  KHJ30282.1  21 ERKSMLRSQWNETSLFLKLADHPeaqkdldkaltllvqrlrhlqqglsasyrseeifygklidsckghpatniacSTTSRGDTSINFINHAKANI-STW 118
                 57999**************7775666667777777777777776666666666666666666666666666555533444444444555555555.777 PP

     DUF2829  58 lpsq 61 
                  +sq
  KHJ30282.1 119 KASQ 122
                 7776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       583  (0.0325172); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1274.97
//
Query:       KHJ30283.1  [L=207]
Description: hypothetical protein EV44_g3736 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       693  (0.0386525); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1586.93
//
Query:       KHJ30284.1  [L=330]
Description: hypothetical protein EV44_g3706 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       895  (0.0499191); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2393.89
//
Query:       KHJ30285.1  [L=197]
Description: hypothetical protein EV44_g3273 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      6e-06   26.1   0.0    1.4e-05   24.9   0.0    1.7  1  Chromo         Chromo (CHRromatin Organisation MOdifier) doma
  ------ inclusion threshold ------
      0.032   14.3   0.0      0.068   13.3   0.0    1.5  1  Chromo_shadow  Chromo shadow domain


Domain annotation for each model (and alignments):
>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   1.5e-09   1.4e-05       1      53 [.     116     166 ..     116     167 .. 0.92

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 1.5e-09
                 EEEEEEEEEEEETTEEC..EEEEEEETTSTGGGTEEEEGGGCSSHSHHHHHHHHH CS
      Chromo   1 yeVerIidhrtdkdgle..leYlVKWkglpysentWEpeenlekcfqelideFkk 53 
                 +e++rI+   t+  g++     lVKWkg    e tWEp++ l++   e++d+F++
  KHJ30285.1 116 FEIDRILRATTRGRGRGiqRLVLVKWKGQA--EPTWEPRSSLQET--EALDKFEE 166
                 699***************9*********86..77*********88..78****97 PP

>> Chromo_shadow  Chromo shadow domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   7.6e-06     0.068       1      31 [.     117     151 ..     117     157 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 7.6e-06
                    TTTTTEEEEEE...TS.-EEEEEEETTS-EEE.EE CS
  Chromo_shadow   1 epekiigavdt...sg.elmflikWkngekaelvp 31 
                    e+++i+ a+++   +g ++++l+kWk++ ++   p
     KHJ30285.1 117 EIDRILRATTRgrgRGiQRLVLVKWKGQAEPTWEP 151
                    57999***999999999***********9987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1541.82
//
Query:       KHJ30286.1  [L=99]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00011   22.2   0.3    0.00013   22.1   0.3    1.1  1  ArfGap    Putative GTPase activating protein for Arf
  ------ inclusion threshold ------
      0.063   13.8   0.1      0.067   13.7   0.1    1.1  1  DUF1687   Protein of unknown function (DUF1687)
       0.13   12.6   0.0       0.17   12.3   0.0    1.2  1  GP68      Phage protein Gp68


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.3   2.1e-08   0.00013      36      97 ..       6      66 ..       1      80 [. 0.86

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 2.1e-08
                -HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG-TTCGH CS
      ArfGap 36 CieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekrsksssk 97
                C +C g Hrs  +h   vr ++  k ++e++++++++g+++ +++l ak  +e+  s++s++
  KHJ30286.1  6 CRNCGGPHRSN-SHKCLVRPTRSGKPTKEQMKTFRQVGEREYQAVLRAKAAEESAASAESNN 66
                **********9.8************************************9888887555444 PP

>> DUF1687  Protein of unknown function (DUF1687)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   1.1e-05     0.067      56     105 ..      28      76 ..      13      89 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.1e-05
     DUF1687  56 kfPTlDQlktilsyvgkskaksvlksafpelseilkkfkkdeeskkklke 105
                 + PT +Q+kt+ + vg+ ++++vl+++ +e+s +  + ++   ++++ +e
  KHJ30286.1  28 GKPTKEQMKTFRQ-VGEREYQAVLRAKAAEESAASAESNNIDLTNSQESE 76 
                 67**********9.999999******998888888888888776666555 PP

>> GP68  Phage protein Gp68
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.9e-05      0.17      17      64 ..      16      63 ..       4      71 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.9e-05
        GP68 17 hetagvlrmrraGykGaailkllklrGtrlvnqmqraldaetaaaraG 64
                    +++r  r+G   ++ +k ++  G r  + + ra  ae++aa a 
  KHJ30286.1 16 NSHKCLVRPTRSGKPTKEQMKTFRQVGEREYQAVLRAKAAEESAASAE 63
                345799*************************************99885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1082  (0.0603492); expected 358.6 (0.02)
Passed bias filter:                      627  (0.0349713); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 737.86
//
Query:       KHJ30287.1  [L=559]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0076   16.3   3.4      0.016   15.3   3.4    1.5  1  ArfGap    Putative GTPase activating protein for Arf


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   3.4   8.9e-07     0.016      15      97 ..     446     526 ..     436     538 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 8.9e-07
                 B-TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG-TTCGH CS
      ArfGap  15 vCaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekrsksssk 97 
                  C +Cg+++ t   l ++++ C +C g +rs  +h   vr ++  k ++e++++++++g+++ +++l ak  +e+  s++s++
  KHJ30287.1 446 SCGNCGSTNHT-EDLCMAATKCRNCGGPYRSN-SHKCLVRPTRSGKPTKEQMKTFRQVGEREYQAVLRAKAAEESATSAESNN 526
                 69999988877.456677889**********9.8************************************9888887555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (559 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 4182.33
//
Query:       KHJ30288.1  [L=179]
Description: hypothetical protein EV44_g3900 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       312  (0.017402); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1370.10
//
Query:       KHJ30289.1  [L=1634]
Description: putative aminophospholipid [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-71  241.6  21.6      1e-71  241.6  21.6    2.3  2  PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-t
    4.2e-21   74.4   5.9    1.5e-20   72.6   2.4    2.5  2  PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
    3.8e-14   53.5   0.1    2.6e-05   24.6   0.0    3.3  3  Hydrolase        haloacid dehalogenase-like hydrolase
    4.8e-12   45.8   0.0      5e-11   42.5   0.0    2.4  2  Cation_ATPase    Cation transport ATPase (P-type)
    4.5e-08   32.8   0.2    1.5e-07   31.1   0.2    1.8  1  E1-E2_ATPase     E1-E2 ATPase
    0.00012   21.9   0.3    0.00034   20.4   0.3    1.7  1  Hydrolase_3      haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   2.3      0.27     8e+02     179     237 ..     535     593 ..     515     610 .. 0.47
   2 !  241.6  21.6   3.4e-75     1e-71       1     249 []    1258    1511 ..    1258    1511 .. 0.98

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.27
  PhoLip_ATPase_C 179 iliililgsillyflflllyssllps...ssefygvleelfsspsfwlvlllvvvvallpdl 237
                      i++il+l+ +l++ +f+++  ++++    ++ fy  l ++  ++   ++ ++++  +l+p  
       KHJ30289.1 535 IVVILVLF-VLSLTVFCTIAYQIWSAtteNKGFY--LDQVHINIARIFIGFFILYNTLIPLS 593
                      22222222.2233333333333333333233333..33333333333333444444444433 PP

  == domain 2  score: 241.6 bits;  conditional E-value: 3.4e-75
  PhoLip_ATPase_C    1 vraSDyaiaqFrfLkrLLlvhGrwsyrRisklilyffyKnvvftlvqfwfqfyngfsgqslyeswlltlynllftslpvivlgifdqdvsae 92  
                       +r+SDy+iaqFrfL++LLlvhGrw+y+R+ k+il +f+K++vf+l+q+++q   g++g+sl+es++lt++n+lftsl v+++gif+qd+sa+
       KHJ30289.1 1258 ARISDYSIAQFRFLQKLLLVHGRWNYIRTGKYILGTFWKELVFYLLQALYQRWAGYTGTSLFESTSLTFFNTLFTSLSVVIIGIFEQDLSAT 1349
                       689***************************************************************************************** PP

  PhoLip_ATPase_C   93 lllkyPelYklgqknklfnlktfllwileglyqsliifflsylvlddssfsdgktndlqlfgtlvftalvlvvnlkval.etktwtliliil 183 
                       +ll++PelY +gq+n+ fn+k++++w++ ++++s+iiff ++ ++++++f  +k+++l ++gtl+ft+ ++ +n+k+++ e+++ t+++i +
       KHJ30289.1 1350 TLLAVPELYIQGQRNEGFNIKKYIGWMFMAVIESMIIFFTMFGLFGSATF--NKDDNLLSLGTLCFTVTLIFINTKLLIfEMYNKTFLSIGA 1439
                       **********************************************9998..9************************999************ PP

  PhoLip_ATPase_C  184 ilgsillyflflllyssllps......ssefygvleelfsspsfwlvlllvvvvallpdllikvlkrtffps 249 
                       + ++i+ +fl+ +l+s +++       +    g+l+ +  ++ +w+v+ l +++ ++++l +  +++tffp+
       KHJ30289.1 1440 WAITIMGWFLWQILLSGVFKPgniyplYPIKDGFLHDFGANILWWTVVTLGIACLVILELGVSSIRKTFFPT 1511
                       *****************999999999977777889***********************************97 PP

>> PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.6   2.4     5e-24   1.5e-20      11      67 .]     240     296 ..     228     296 .. 0.93
   2 ?    2.3   0.1     0.046   1.4e+02      17      33 ..    1282    1298 ..    1280    1307 .. 0.82

  Alignments for each domain:
  == domain 1  score: 72.6 bits;  conditional E-value: 5e-24
  PhoLip_ATPase_N  11 kkkyasNkIsTsKYtlltFlpknLfeqFrrvaNlYFLviailqliPqisplspvtti 67 
                       ++y  N I++s+Ytl++F+p++Lf qF+++aN YFL+++i qliP++s+++++tti
       KHJ30289.1 240 GTEYFGNTIRSSRYTLFNFFPRQLFFQFSKLANAYFLLVSIFQLIPGLSTTGTYTTI 296
                      458****************************************************97 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.046
  PhoLip_ATPase_N   17 NkIsTsKYtlltFlpkn 33  
                       N+I+T KY l tF    
       KHJ30289.1 1282 NYIRTGKYILGTFWKEL 1298
                       9*********9997655 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0015       4.5       1      27 [.     637     668 ..     637     721 .. 0.76
   2 !   24.6   0.0   8.8e-09   2.6e-05     104     170 ..    1082    1148 ..    1004    1173 .. 0.75
   3 !   17.3   0.0   1.6e-06    0.0046     158     209 ..    1190    1243 ..    1166    1244 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0015
                 SSEEEEESBTTTBCHHHHHHHHHHHH.....C CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.....x RF
   Hydrolase   1 iktvvfDkdGTLttgepsvedvivsa.....a 27 
                 ++ ++ Dk+GTLt+  ++ +++ v       +
  KHJ30289.1 637 VNYIFSDKTGTLTENVMRFRKLSVAGyawlhD 668
                 578999**********9998877766444443 PP

  == domain 2  score: 24.6 bits;  conditional E-value: 8.8e-09
                  TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTT..GGGESEEEEHHCES CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxx RF
   Hydrolase  104 qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlG..ddyfdaviasdiet 170 
                  + ++ +  +i+d+  + +++ e++ +L++a+i++++ltgd +eta  +a  +   + y +++i  ++++
  KHJ30289.1 1082 DFELSGATAIEDK--LQKGVPETIDKLRRANIKIWMLTGDKRETAINIAYSARlcKSYSEIIILDYEKG 1148
                  4688899999999..*******************************99999887666666666555555 PP

  == domain 3  score: 17.3 bits;  conditional E-value: 1.6e-06
                  GGESEEEEHHCESSTTTSHHHHHHHHHHHTST..GGGEEEEESSHHHHHHHHHT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  158 dyfdaviasdietvakpspegkvaaireLqgk..peevamVGDgvnDaaalaaA 209 
                  ++fd v+ +d + +  +sp++k  ++++ ++k   + ++++GDg+nD+a++ +A
  KHJ30289.1 1190 QFFDLVVLADSVICCRASPSQKASLVKRVRIKvvNSTTLAIGDGANDIAMILEA 1243
                  46688888888889999************98877999*************9887 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   1.7e-14     5e-11      19      87 ..     795     881 ..     762     885 .. 0.84
   2 ?   -0.1   0.0      0.33   9.8e+02      12      32 ..    1109    1129 ..    1102    1151 .. 0.82

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 1.7e-14
  Cation_ATPase  19 llGnktEsALlvlaekl...................gldteelreetkkvqeipFnssrKrmsvvlklepekkvrlyvKGApeiilkr 87 
                     + +++E AL+++a++l                       +++ e ++++ +i+F+s+rKrms++++  p++k+++++KGA  iil +
     KHJ30289.1 795 QSASPDELALIKAAQDLewlvidrtarsitltypgeLNFSTKVTEAYQILDVIEFSSKRKRMSIIVRF-PDGKLCIFCKGADSIILPK 881
                    56799************88888888888888888765556777888*********************9.8***************976 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.33
  Cation_ATPase   12 sekdevkllGnktEsALlvla 32  
                     ++ + + l+G+k E+A+  + 
     KHJ30289.1 1109 ANIKIWMLTGDKRETAINIAY 1129
                     5678899*********97654 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.2     5e-11   1.5e-07      17     163 ..     382     594 ..     371     606 .. 0.82

  Alignments for each domain:
  == domain 1  score: 31.1 bits;  conditional E-value: 5e-11
                   EEEGGG--TTSEEEEETT-B--SEEEEEE.....E-SEEE-TTTS---S-EE-............................................ CS
  E1-E2_ATPase  17 eidakelvpGDivllkagdrvpaDgrive.....gsaevdesaLTGEslpvek............................................ 64 
                   + + k++++GDiv+l+ +d +p D+++++     g a +++ aL GE    +k                                            
    KHJ30289.1 382 TQKWKDVKVGDIVKLQRNDHIPSDIVLLHaegqnGVAYIETMALDGETNLKSKqapsilakkyktideivtcraqivaedpnidlynfeghliidde 478
                   56779***********************9666555559**********************************************************9 PP

                   ....G-TTEE-TT-EEEE.-EEEEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTT........... CS
  E1-E2_ATPase  65 ....ekgdmvfsGtvvvs.geakavVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvflialllgksla........... 145
                       + ++ +  G++  +   ++++V++tge+ ++     + ++++ k ++lqk+ ++++ +lv++vl +++++ ++  ++  ++            
    KHJ30289.1 479 mlplTCNEIILRGSILRNtSAVIGIVINTGEECKIRMN--ANKNPRIKAPELQKITNQIVVILVLFVLSLTVFCTIAYQIWSATTEnkgfyldqvhi 573
                   9999999999*****9994556789******9998855..55777789999*********9999999988888777766655555455555655555 PP

                   ...HHHHHHHHHHHHHS-TTH CS
  E1-E2_ATPase 146 ...eallralallvaaiPcaL 163
                      ++++ ++ l    iP  L
    KHJ30289.1 574 niaRIFIGFFILYNTLIPLSL 594
                   554555555555555555555 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.3   1.1e-07   0.00034      57     226 ..    1070    1247 ..    1055    1257 .. 0.78

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 1.1e-07
                   EEEEGGGTEEECTTTEEEEE--B-...HHHHHHHHHHHHHTTCEEEEEE.SSEEEESTT.........THHHHHHHHHCHCTCEEEESHHHHHCHC CS
  Hydrolase_3   57 pvialNGaliddekgkilykstis...kedvkeiikllkennveillyt.edkvyvlnk........eksekkkkeeektkkkkeeidseeelede 140 
                   ++i   G li +++ ++  ++ i+   ++ v e i+ l+  n++i++ t +++ + +n         + se ++ ++ek + ++  ++  +++++ 
   KHJ30289.1 1070 TLIEKAGDLI-EYDFELSGATAIEdklQKGVPETIDKLRRANIKIWMLTgDKRETAINIaysarlckSYSEIIILDYEKGNVNMVVSNALSDIKKG 1164
                   5566666666.5555555555555444567889999999999999988843334444447899998877888888888888888888889999999 PP

                   SESEEEEES-HHHHHHH.HHHHHHHCTTTEEEEEESTTEEEEEETT-SHHHHHHHHHHHCT--GGGEEEEESSGGGHHHHHHSSEEE CS
  Hydrolase_3  141 eiakililkdkekldel.ekelksklnklltitssskgyleimpkgvsKgtalkklakelnisleeviafGDgeNDieMLeaaglgv 226 
                   ++a+ +i+ d + l+e+ ++++ ++ +   + +   ++++   +   +K++ +k++   +++ ++ ++a+GDg NDi+M+  a +g+
   KHJ30289.1 1165 TLAHTVIVVDGQTLSEIdNNDFLALQFF--DLVVLADSVICCRASPSQKASLVKRVR--IKVVNSTTLAIGDGANDIAMILEAHVGI 1247
                   9999999999999999986666666443..78889999999999999********98..9********************9998877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1634 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       877  (0.0489152); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.93u 0.30s 00:00:01.23 Elapsed: 00:00:00.44
# Mc/sec: 11277.66
//
Query:       KHJ30290.1  [L=206]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       772  (0.0430587); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1445.03
//
Query:       KHJ30291.1  [L=355]
Description: putative replication factor c subunit 4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.6e-21   75.4   0.1      1e-20   73.9   0.0    1.8  1  Rep_fac_C        Replication factor C C-terminal domain
    5.1e-11   42.6   0.1    9.1e-08   32.0   0.0    2.5  2  DNA_pol3_delta2  DNA polymerase III, delta subunit
    1.2e-10   41.9   0.0    2.7e-10   40.8   0.0    1.6  1  AAA              ATPase family associated with various cellul
    3.2e-07   30.5   0.0    1.4e-06   28.3   0.0    1.9  2  AAA_14           AAA domain
      2e-06   28.3   0.0    0.00015   22.2   0.0    2.4  2  AAA_16           AAA ATPase domain
    3.8e-05   23.5   0.0    8.2e-05   22.4   0.0    1.6  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    5.4e-05   23.5   0.0       0.11   12.8   0.0    2.5  2  AAA_22           AAA domain
    0.00027   20.8   0.0    0.00083   19.2   0.0    1.8  2  Viral_helicase1  Viral (Superfamily 1) RNA helicase
    0.00037   20.3   0.0    0.00074   19.3   0.0    1.5  1  DNA_pol3_delta   DNA polymerase III, delta subunit
    0.00049   20.0   0.0    0.00096   19.0   0.0    1.5  1  AAA_3            ATPase family associated with various cellul
     0.0036   17.6   0.0     0.0089   16.4   0.0    1.7  1  AAA_assoc_2      AAA C-terminal domain
     0.0037   16.3   0.0     0.0089   15.0   0.0    1.7  1  MeaB             Methylmalonyl Co-A mutase-associated GTPase 
     0.0066   15.9   0.1      0.032   13.6   0.0    1.9  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
     0.0073   16.1   0.1       0.27   11.0   0.0    2.4  2  DEAD             DEAD/DEAH box helicase
  ------ inclusion threshold ------
       0.01   15.8   0.1      0.092   12.6   0.1    2.4  2  NTPase_1         NTPase
      0.011   15.7   0.0       0.02   14.8   0.0    1.4  1  Rad17            Rad17 P-loop domain
      0.021   14.6   0.0      0.032   14.0   0.0    1.4  1  AAA_11           AAA domain
      0.032   14.6   0.1      0.088   13.1   0.1    1.9  1  AAA_19           AAA domain
      0.035   14.1   0.2       0.23   11.5   0.1    2.4  2  AAA_5            AAA domain (dynein-related subfamily)
      0.046   13.5   0.0       0.15   11.8   0.0    1.8  2  AAA_24           AAA domain
      0.059   12.9   0.1       0.42   10.1   0.1    2.3  3  AAA_25           AAA domain
      0.067   12.6   0.0        4.9    6.5   0.0    2.3  2  TniB             Bacterial TniB protein
      0.091   12.2   0.0       0.16   11.4   0.0    1.4  1  KTI12            Chromatin associated protein KTI12
       0.13   12.2   0.0         14    5.6   0.0    2.4  2  ResIII           Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> Rep_fac_C  Replication factor C C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.9   0.0   1.4e-23     1e-20       1      87 [.     254     339 ..     254     340 .. 0.97

  Alignments for each domain:
  == domain 1  score: 73.9 bits;  conditional E-value: 1.4e-23
                 --HHHHHHHHHHHHHT-HHHHHHHHHHHHHHC---HHHHHHHHHHHGCCS..S-HHHHHHHHHHHHHHHHHHHCTH-HHHHHHHHHH CS
   Rep_fac_C   1 phpteieeileaclngdfeeaykklrellvekGysaediltqlhrvvkeqeelpeaqkleilellgeiekrlveGasehlqlsalla 87 
                 php +++ +++ac +g+++ a ++lr +l++ Gys  di+++++rv k+  +l+e+ kle+++++g+++++++eG++++lqls+ + 
  KHJ30291.1 254 PHPIKVQVMIKACYEGKVAVALDVLR-ELWNLGYSSHDIISTMFRVTKTIPTLSEHSKLEFIKEIGFTHMKILEGVQSLLQLSGCIV 339
                 89***********99**********8.**********************977*******************************9986 PP

>> DNA_pol3_delta2  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0024       1.8       2      48 ..      49      94 ..      48     105 .. 0.88
   2 !   32.0   0.0   1.2e-10   9.1e-08      84     162 ..     108     189 ..      95     190 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0024
  DNA_pol3_delta2  2 qeealkilskalksgrlahayLfeGdegigkkelalnlakallceek 48
                     ++e+++ l+ +++ g++ h  +++G  gigk ++ l+la++ll +  
       KHJ30291.1 49 NTETIERLKIIARDGNMPHV-IISGMPGIGKTTSVLCLAHQLLGDAY 94
                     78999*************96.68******************987665 PP

  == domain 2  score: 32.0 bits;  conditional E-value: 1.2e-10
  DNA_pol3_delta2  84 kldqirelieelsrkpre...skkkiiiiedaekmtksAaNalLktlEEPsenaifiLitsdtnklLktirSRcqelkfspl 162
                       +d +r+ i+ + +k +    +++k++++++a+ mt+ A+ al +++E  s  + f +  +++nk++++++SRc +l+ s+l
       KHJ30291.1 108 GIDVVRNRIKGFAQKKVTlppGRHKLVVLDEADSMTSGAQQALRRIMEIYSPTTRFAFACNQSNKIIEPLQSRCAILRYSRL 189
                      7899998888888887766889******************************************************998876 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.0   3.6e-13   2.7e-10       1     128 [.      68     185 ..      68     189 .. 0.89

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 3.6e-13
                 EEEESSTTSSHHHHHHHHHHHH.....THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS...TSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakel.....gvefleisgsellskyvgesekkirelfkeakeka...kpsilfiDEidalaksrsgseseeeervvnqLlt 91 
                 v+++G pG+GKT+ +  +a++l     +  +le+++s+ +   +    ++i+++ ++  +     +++ +++DE+d++++             +++L +
  KHJ30291.1  68 VIISGMPGIGKTTSVLCLAHQLlgdayKEAVLELNASDER--GIDVVRNRIKGFAQKKVT-LppgRHKLVVLDEADSMTSGA-----------QQALRR 152
                 6899*****************877666789**********..999999999999998544.359888***********9888...........****** PP

                 HHHHTTTSSSTEEEEEEESSGGGSTHHHHSTTSSEEE CS
         AAA  92 eldgvkkkeskvivigatnrpdkldpallrgRfdrki 128
                  ++ ++    ++ +  a+n+ +k+ ++l  +R+ +  
  KHJ30291.1 153 IMEIYSP---TTRFAFACNQSNKIIEPLQ-SRCAILR 185
                 *****99...589****************.9*98765 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.21   1.6e+02      57      99 ..      28      72 ..       9      72 .. 0.68
   2 !   28.3   0.0   1.9e-09   1.4e-06       4     101 ..      67     171 ..      64     181 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.21
      AAA_14 57 leklke......ekktylflDEiqevpewekalkslvdegknldvivtG 99
                     +      ek + +flD i   +e  + lk + ++g+  +vi++G
  KHJ30291.1 28 E----NyelpwvEKYRPVFLDDIVGNTETIERLKIIARDGNMPHVIISG 72
                2....122334445566*********************99777898887 PP

  == domain 2  score: 28.3 bits;  conditional E-value: 1.9e-09
      AAA_14   4 ilvitGaRrvGKTtllkqlikell..vkkesilyinldderdkkladpekllelilek..lke.ekktylflDEiqev.pewekalkslvdeg...knl 93 
                  ++i+G+  +GKTt +  l+++ll  + ke +l++n  der  +   + ++  + ++k  l +  ++++++lDE+  + +++++al+++++ +   +++
  KHJ30291.1  67 HVIISGMPGIGKTTSVLCLAHQLLgdAYKEAVLELNASDERGIDVVRN-RIKGFAQKKvtL-PpGRHKLVVLDEADSMtSGAQQALRRIMEIYsptTRF 163
                 689*****************9999*9999**********999775544.355555555433.25899********87636799******9955322345 PP

      AAA_14  94 dvivtGSn 101
                  + +  Sn
  KHJ30291.1 164 AFACNQSN 171
                 55555555 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0     2e-07   0.00015       7      51 ..      51      92 ..      46     109 .. 0.77
   2 ?    3.6   0.0       0.1        76     130     160 ..     126     155 ..      95     166 .. 0.69

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 2e-07
      AAA_16  7 eeleqLlsalervrsgrpelvllsGesGvGKsslvrellralekd 51
                e +e+L+ +    r+g  + v++sG++G+GK++ v +l+++l +d
  KHJ30291.1 51 ETIERLKIIA---RDGNMPHVIISGMPGIGKTTSVLCLAHQLLGD 92
                5555555544...5677799*********************9998 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.1
      AAA_16 130 lsrderplvlvlDdlqwadeaslqllaaLlr 160
                 l+++++  ++vlD+++   ++ +q+l+ +++
  KHJ30291.1 126 LPPGRH-KLVVLDEADSMTSGAQQALRRIME 155
                 333233.799****************99886 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   1.1e-07   8.2e-05       2      57 ..      39      89 ..      38     103 .. 0.90

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 1.1e-07
      RuvB_N  2 rPksleeyigqekvkeklkifieaakkreealdhvllyGpPGlGkttlakiiakel 57
                rP  l++ +g ++  e+lki+     +r+ ++ hv+++G PG+Gktt    +a++l
  KHJ30291.1 39 RPVFLDDIVGNTETIERLKII-----ARDGNMPHVIISGMPGIGKTTSVLCLAHQL 89
                999****************97.....58999****************999999876 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   0.00014      0.11       7      35 ..      67      95 ..      61     123 .. 0.77
   2 !    8.6   0.0    0.0028       2.1      85     118 ..     119     156 ..      94     171 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00014
      AAA_22  7 ilvvtGesGtGKTtllrrlleqldeeaka 35
                ++++ G +G+GKTt++  l++ql  +a+ 
  KHJ30291.1 67 HVIISGMPGIGKTTSVLCLAHQLLGDAYK 95
                789*******************9766554 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0028
      AAA_22  85 alrarav.....ielliiDEaqhlrseealeeLrsllnl 118
                  ++++ +     ++l+++DEa+ + +  a + Lr+++++
  KHJ30291.1 119 FAQKKVTlppgrHKLVVLDEADSM-TSGAQQALRRIMEI 156
                 44555556666779**********.64444445444443 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       2.8   2.1e+03      39      71 ..      16      46 ..      10      51 .. 0.82
   2 !   19.2   0.0   1.1e-06   0.00083       2      81 ..      69     149 ..      68     157 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.8
  Viral_helicase1 39 kpklpnlsvrtvdsflmalvkstkgkililDEy 71
                     ++kl +++++t++ ++ + v++  ++ ++lD++
       KHJ30291.1 16 ANKLLQSNTNTIENYELPWVEK--YRPVFLDDI 46
                     4788899999999999999986..999999997 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 1.1e-06
  Viral_helicase1   2 vvhGvpGcGKStlirkllrtsliltvnrptaelltegk...pklpnlsvrtvdsflmalvkstkgkililDEylllhaGyill 81 
                      +++G+pG GK+t++  l+++ l   ++++++  l+++     ++ +++++++ +   +l ++ + k+++lDE+ ++++G  ++
       KHJ30291.1  69 IISGMPGIGKTTSVLCLAHQ-LLGDAYKEAVLELNASDergIDVVRNRIKGFAQKKVTLPPG-RHKLVVLDEADSMTSGAQQA 149
                      89****************99.88888888888888777777888888888888877777665.8********99988887665 PP

>> DNA_pol3_delta  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   9.9e-07   0.00074      58     170 ..     131     233 ..      93     235 .. 0.93

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 9.9e-07
                     EEEEEEE--.....TT-S-TTHHHHHHHHTTT--SSEEEEEEES.S--HHHHHHHHHTTTEEEEEE----TTTHHHHHHHHHHHTT-EE-HHHHH CS
  DNA_pol3_delta  58 krivvlknpklltkesklnekllkeLeeylsnlpedtlLiliapkklderkklvklLkkkatvveaktlkeeelkkwiqkraqelglkiekeale 152
                      ++vvl+ +      ++ +   +++L ++++ ++++t + + ++    + +k++  L+++  ++++++l+ +++ k + +++++++++  ++ l 
      KHJ30291.1 131 HKLVVLDEA------DSMTSGAQQALRRIMEIYSPTTRFAFACN----QSNKIIEPLQSRCAILRYSRLTDAQIVKRLLQIIETEKVEYNDDGLA 215
                     688888888......55889999*********************....7789******************************************* PP

                     HHHHHHTT-HHHHHHHHH CS
  DNA_pol3_delta 153 lLlelvennlsaikqele 170
                      L+ + e++++++ ++l+
      KHJ30291.1 216 ALVFSAEGDMRQAINNLQ 233
                     ****************98 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   1.3e-06   0.00096       1      87 [.      67     155 ..      67     169 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.3e-06
       AAA_3   1 hvllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkk...Gpvfanllladeinrappktqsalleame 87 
                 hv++ g+PG++kt+ v  la++l  +  +     +l  sd  G++v++++ k f  kk    p  ++l++ de +  ++ +q al  +me
  KHJ30291.1  67 HVIISGMPGIGKTTSVLCLAHQLLGDAYK-EAVLELNASDERGIDVVRNRIKGFAQKKvtlPPGRHKLVVLDEADSMTSGAQQALRRIME 155
                 9*******************988766655.4456899999999999999987776555111566799******************99997 PP

>> AAA_assoc_2  AAA C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.2e-05    0.0089       3      36 ..     205     238 ..     203     283 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.2e-05
                  X.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  AAA_assoc_2   3 kklkleddalealaeladGDaRkaLnlLElaaea 36 
                  +k++++dd l+al+  a+GD+R+a+n L+  ++ 
   KHJ30291.1 205 EKVEYNDDGLAALVFSAEGDMRQAINNLQSTVAG 238
                  6899************************976654 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.2e-05    0.0089      21      69 ..      57     105 ..      34     123 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.2e-05
                 HHGGG-S-SEEEEEEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE---- CS
        MeaB  21 rllakaGraqvvGltGvPGaGkstlvealglelrrrGkrvavlavDPss 69 
                 +++a+ G+   v + G+PG Gk t v  l+ +l    ++ avl ++ s 
  KHJ30291.1  57 KIIARDGNMPHVIISGMPGIGKTTSVLCLAHQLLGDAYKEAVLELNASD 105
                 578999************************************9987664 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   4.2e-05     0.032       2      59 ..      43     103 ..      42     117 .. 0.82
   2 ?   -0.8   0.0       1.1   8.1e+02     109     131 ..     133     155 ..     121     161 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.2e-05
  Mg_chelatase   2 lkdvkGqeeakraleiaaa.Gg.HnlllvGppGsGKtmlakrl.psllpplseeealevak 59 
                   l d++G++e+ + l+i a  G+  ++++ G pG GKt    +l ++ll +  +e +le ++
    KHJ30291.1  43 LDDIVGNTETIERLKIIARdGNmPHVIISGMPGIGKTTSVLCLaHQLLGDAYKEAVLELNA 103
                   6899***999999998665254359************999998357999999999998765 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.1
  Mg_chelatase 109 vLfLDElpefkrkvlevLRePle 131
                   +++LDE+  +++ + ++LR+ +e
    KHJ30291.1 133 LVVLDEADSMTSGAQQALRRIME 155
                   6799***************9887 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.16   1.2e+02      16      39 ..      67      90 ..      51     100 .. 0.78
   2 !   11.0   0.0   0.00036      0.27     117     148 ..     126     156 ..      91     167 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.16
                EEEEEESTTSSHHHHHHHHHHHHH CS
                xxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 16 dvlvaaeTGsGKTlaflipvlqiv 39
                +v++++  G GKT+  l  + q +
  KHJ30291.1 67 HVIISGMPGIGKTTSVLCLAHQLL 90
                7999**********9888777665 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00036
                 SHCTTEEEEEEETHHHHHHTTTHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 117 lnlsqvrflVlDEadrlldqgfsdfinrilnq 148
                 l   + +++VlDEad + +   ++ ++ri++ 
  KHJ30291.1 126 LPPGRHKLVVLDEADSMTSG-AQQALRRIMEI 156
                 44567799**********95.99999998765 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   0.00012     0.092       1      23 [.      67      89 ..      67      97 .. 0.86
   2 ?    0.2   0.0       0.8     6e+02      95     147 ..     130     180 ..      94     202 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00012
                EEEEE--TTSSHHHHHHHHHHHH CS
    NTPase_1  1 kvfiTGppGvGKtTlvkkvlell 23
                +v+i+G+pG+GKtT v  ++++l
  KHJ30291.1 67 HVIISGMPGIGKTTSVLCLAHQL 89
                79************999888776 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.8
                 HH-EEEE---STTGGG-HHHHHHHHHHHTTTSEEEEE--SS--SHHHHHHHT- CS
    NTPase_1  95 eadviviDEiGkmElkskkfkeaveevLksekpvlavihrrkdlalveeirer 147
                 +  ++v+DE  +m   +++  + + e+ ++ + + +   ++  ++++e +++r
  KHJ30291.1 130 RHKLVVLDEADSMTSGAQQALRRIMEIYSPTTRFAFACNQS--NKIIEPLQSR 180
                 34589999999999999888888888888877777766666..5566666665 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   2.7e-05      0.02       7      76 ..      32      97 ..      26     123 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.7e-05
       Rad17  7 elWfekykPekaeelavhkkkieevkewlkadvLesrkkriLLisGPsGCgkstvvkvLskel.giklrew 76
                 +W+eky+P  ++++    + ie +k   +   +++      +isG +G gk+t v  L+ +l g  ++e 
  KHJ30291.1 32 LPWVEKYRPVFLDDIVGNTETIERLKIIARDGNMPHV-----IISGMPGIGKTTSVLCLAHQLlGDAYKEA 97
                48**************99999*999988887777776.....8****************986426666665 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   4.2e-05     0.032      17      73 ..      66     115 ..      50     211 .. 0.69

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.2e-05
      AAA_11  17 seitliqGPPGtgKTktivellsqll................srrkseeeksakpriLvCapSNaAvDeller 73 
                 ++ ++i+G PG gKT+ ++ l +qll                                        +D++  r
  KHJ30291.1  66 PH-VIISGMPGIGKTTSVLCLAHQLLgdaykeavlelnasdeR----------------------GIDVVRNR 115
                 44.89********************755444444444333330......................33333333 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   0.00012     0.088       7      84 ..      62     142 ..      56     231 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00012
      AAA_19   7 alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgaeatTi....Hrlalldfddll 84 
                 + + +++++ + pG GKT+ + +  + l+       + + l a  +r  + +r+r++++ ++  T+    H+l +ld  d +
  KHJ30291.1  62 DGNMPHVIISGMPGIGKTTSVLCLAHQLLGDAYK-EAVLELNASDERGIDVVRNRIKGFAQKKVTLppgrHKLVVLDEADSM 142
                 55678899************99998888776643.35666778889999999999999888877765555666554444433 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   0.00031      0.23       1      90 [.      67     155 ..      67     158 .. 0.77
   2 ?   -1.5   0.0         3   2.2e+03      79      99 ..     192     212 ..     188     246 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00031
                 EEEEE--SSSSHHHHHHHGGGGB.S--EEEEE--TT--HHHHH--B--.........--------G-SEEEEESGGG--HHHHHHHHHHHH CS
       AAA_5   1 dvlLvGppGtgKselaerlaaal.nreveyvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEveraesevlnsLlslle 90 
                 +v++ G pG+gK++ +  la+ l ++ + +  l  + + e  +  ++  n+ + + +++++    + +++vlDE + + s ++++L +++e
  KHJ30291.1  67 HVIISGMPGIGKTTSVLCLAHQLlGDAYKEAVLELNASDERGIDVVR--NRIKGFAQKKVTLPPGRHKLVVLDEADSMTSGAQQALRRIME 155
                 79*******************99987777777776665554444443..566677777777666688899999999999999998888775 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 3
                 HHHHHHHHHHHHSSEEE..-S CS
       AAA_5  79 sevlnsLlslleerrllleeg 99 
                  +++++Ll+++e++++  ++ 
  KHJ30291.1 192 AQIVKRLLQIIETEKVEYNDD 212
                 678899999999988876665 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0    0.0002      0.15       5      87 ..      68     152 ..      64     166 .. 0.67
   2 ?   -2.0   0.0       3.4   2.6e+03     112     136 ..     275     302 ..     263     327 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.0002
      AAA_24   5 iliyGpsgiGKTtlakel.......gpkplfidtekGlks.ldadkfpdieswedfldevvelaaeladyktlviDtideleelclaevir 87 
                 ++i G +giGKTt+++ l        +k +++ ++++  + +d+ +      ++ f ++ v+l+   +  k +v+D +d + + + + ++r
  KHJ30291.1  68 VIISGMPGIGKTTSVLCLahqllgdAYKEAVLELNASDERgIDVVRN----RIKGFAQKKVTLPPGRH--KLVVLDEADSMTSGAQQALRR 152
                 7899**************77777775555555555544321333332....45666666666655555..888888888888888777766 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 3.4
      AAA_24 112 rrllkklqelrk...nvifiahektrkd 136
                  ++l+ l++l++   ++i ++   t+++
  KHJ30291.1 275 LDVLRELWNLGYsshDIISTMFRVTKTI 302
                 5678999999999988998887777765 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00057      0.42      36      92 ..      68     118 ..      52     160 .. 0.68
   2 ?    0.1   0.0      0.69   5.1e+02     144     177 ..     132     165 ..     124     170 .. 0.77
   3 ?   -1.8   0.0       2.6   1.9e+03      72     113 ..     214     256 ..     205     283 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00057
      AAA_25  36 allaGapgtGKttlaldlalavatGkpwlgpvapeqgkVlyvsaEds..edelrrRlra 92 
                 +++ G pg GKtt +l la+ ++ +          + +Vl ++a d    d +r+R++ 
  KHJ30291.1  68 VIISGMPGIGKTTSVLCLAHQLLGDA--------YKEAVLELNASDErgIDVVRNRIKG 118
                 6899***************9998433........2335665555444114566666665 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.69
      AAA_25 144 rlvviDplsralggdensnsdvgalvealeriar 177
                 +lvv+D  +++++g  ++ + + +++++  r+a 
  KHJ30291.1 132 KLVVLDEADSMTSGAQQALRRIMEIYSPTTRFAF 165
                 79*********99988877777777766666665 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 2.6
      AAA_25  72 gkVlyvsaEdsedelrrRlravgealrddarllvldlagv.es 113
                  + l+ saE++  +  + l+ + + +++ +++ v +++++ ++
  KHJ30291.1 214 LAALVFSAEGDMRQAINNLQSTVAGFNFVSGENVFKVVDSpHP 256
                 5677888888876777777777777766666666666555444 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0    0.0066       4.9      21      51 ..      51      81 ..      35      92 .. 0.87
   2 ?    3.6   0.0      0.05        37     119     144 ..     130     155 ..     112     157 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0066
        TniB 21 erLeeLleypkrkrmpnlllvGdsnnGKtmi 51
                e++e+L   ++   mp++++ G + +GKt+ 
  KHJ30291.1 51 ETIERLKIIARDGNMPHVIISGMPGIGKTTS 81
                6677888889999****************85 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.05
        TniB 119 kvrvLiiDEihnllagsarkqrefln 144
                 + +++++DE +++ +g +++ r++++
  KHJ30291.1 130 RHKLVVLDEADSMTSGAQQALRRIME 155
                 5799*************999998875 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00021      0.16       1      39 [.      65     103 ..      65     144 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00021
                 E.EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THH CS
       KTI12   1 MpLvvltGlPssGKstrakeLakaleeekrsvvviddes 39 
                 Mp v+++G+P  GK+t +  La++l    ++  v++ ++
  KHJ30291.1  65 MPHVIISGMPGIGKTTSVLCLAHQLLGDAYKEAVLELNA 103
                 9*********************99999888777766544 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.019        14      16      58 ..      53      99 ..      24     106 .. 0.81
   2 ?    4.2   0.0     0.052        39     122     165 ..     120     165 ..     100     167 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.019
                T..........TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EE CS
      ResIII 16 leklks....krdkrglikmaTGtGKTlvaaklierllkkgkeekfl 58
                +e lk+     +  +++i    G GKT   + l+ +ll  +++e +l
  KHJ30291.1 53 IERLKIiardGNMPHVIISGMPGIGKTTSVLCLAHQLLGDAYKEAVL 99
                444444543233449999*******************9999988776 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.052
                 .....HHHTTT-SEEEEETGGGTTS...TTTHHHHHT---SEEEEE CS
      ResIII 122 eeeseellrdrfdviiiDEaHrlgak..kswreilekfkeavllgl 165
                  +++ +l ++r+++++ DEa  +++   ++ r+i+e +++ +++++
  KHJ30291.1 120 AQKKVTLPPGRHKLVVLDEADSMTSGaqQALRRIMEIYSPTTRFAF 165
                 56777889999*********9988874469999***9999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        82  (0.0045736); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 0.56u 0.32s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 2419.83
//
Query:       KHJ30292.1  [L=1022]
Description: putative ankyrin repeat protein nuc-2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-41  140.4   1.5    2.3e-14   53.7   0.0    4.0  4  Ank_2     Ankyrin repeats (3 copies)
    2.4e-26   91.7  12.1    1.3e-09   38.4   0.3    6.4  7  Ank_4     Ankyrin repeats (many copies)
    4.5e-22   77.8   3.3      0.015   15.6   0.0    6.7  6  Ank_5     Ankyrin repeats (many copies)
    1.4e-20   71.1   2.0     0.0086   16.5   0.0    7.1  6  Ank_3     Ankyrin repeat
    1.1e-17   63.6   7.0     0.0028   18.0   0.0    7.6  8  Ank       Ankyrin repeat
    6.7e-11   42.7  22.7    1.5e-06   28.4   2.7    3.5  4  SPX       SPX domain
    1.7e-09   37.8   0.0    1.4e-08   34.8   0.0    2.2  2  GDPD      Glycerophosphoryl diester phosphodiesterase family


Domain annotation for each model (and alignments):
>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.0   4.4e-12   1.1e-08       6      78 ..     283     365 ..     278     373 .. 0.79
   2 !   53.7   0.0   9.1e-18   2.3e-14       1      79 [.     313     402 ..     313     406 .. 0.83
   3 !   32.6   0.0   3.4e-11   8.8e-08      25      79 ..     375     435 ..     364     439 .. 0.84
   4 !   41.3   0.1     7e-14   1.8e-10       2      73 ..     446     529 ..     445     536 .. 0.80

  Alignments for each domain:
  == domain 1  score: 35.5 bits;  conditional E-value: 4.4e-12
       Ank_2   6 kngnlelvklLl..egadpn..k..ngktaLhyAakngnleivklLleh......adndgrtpLhyAarsghleivklLlekgad 78 
                 + g  e ++lL+    +d+   +  n+++ Lh Aa++gnl ++k  l+       ad +g+ pLhyA+ +ghl++v+ Ll++  d
  KHJ30292.1 283 NRGPQESLQLLIdtGLVDLQseDdiNERNCLHQAAIYGNLFVLKEGLKGgvavsrADAYGQIPLHYACMHGHLDMVETLLDS--D 365
                 347458999999854466665425799***********9988899998456777888***********************76..3 PP

  == domain 2  score: 53.7 bits;  conditional E-value: 9.1e-18
       Ank_2   1 LhlAakngnlelvklLl.egadpn..k.ngktaLhyAakngnleivklLleh.......adndgrtpLhyAarsghleivklLlekgadi 79 
                 Lh+Aa +gnl ++k  l  g+ ++  +  g+ +LhyA+++g+l++v++Ll+        +d d  tpL++A+r gh+++v+ L+ + a i
  KHJ30292.1 313 LHQAAIYGNLFVLKEGLkGGVAVSraDaYGQIPLHYACMHGHLDMVETLLDSdpstidfIDHDRFTPLIHAIRRGHFDCVEHLILRSARI 402
                 8******9888999999666666664369*********************966777666669999****************999555555 PP

  == domain 3  score: 32.6 bits;  conditional E-value: 3.4e-11
       Ank_2  25 ngktaLhyAakngnleivklLleh...ad...ndgrtpLhyAarsghleivklLlekgadi 79 
                 +  t+L++A+++g+ ++v+ L+     +d   ++ + pL +A+ +g+  iv+lLl++ga+i
  KHJ30292.1 375 DRFTPLIHAIRRGHFDCVEHLILRsarIDpssDTDHVPLNLACDYGSVSIVELLLKHGAEI 435
                 567***************9999645574455688999******************99*998 PP

  == domain 4  score: 41.3 bits;  conditional E-value: 7e-14
       Ank_2   2 hlAakngnl.elvklLl.egadpn..k..ngktaLhyAakngnleivklLleh......adndgrtpLhyAarsghleivklLl 73 
                 hl a++g++ el+ lL  ++ad+n  +    +t+L++Aa++gn+ ++++Ll+       +d++g ++++yAa++ghl++++l  
  KHJ30292.1 446 HLVARSGKTpELLLLLKqHNADLNqvDklYSWTPLFHAASEGNVLCIRILLDVgvqleiLDEKGLSAMYYAAWEGHLDCMQLIS 529
                 7788886443677777688899987636999***********9999*****9455667888***********99*******764 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       4.9   1.2e+04       9      26 ..     241     258 ..     234     268 .. 0.72
   2 !   13.3   0.0   3.7e-05     0.095       5      48 ..     278     322 ..     275     327 .. 0.83
   3 !   34.8   0.2   6.7e-12   1.7e-08       2      55 .]     310     362 ..     309     362 .. 0.95
   4 !   38.4   0.3   5.2e-13   1.3e-09       4      55 .]     345     396 ..     344     396 .. 0.87
   5 ?    5.1   0.0     0.014        35       8      45 ..     416     451 ..     412     461 .. 0.72
   6 !   17.3   0.1   2.1e-06    0.0054       6      55 .]     446     496 ..     442     496 .. 0.86
   7 !   27.9   0.0   9.9e-10   2.5e-06       2      53 ..     477     527 ..     476     528 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4.9
       Ank_4   9 aisgrlelvrlLlekgad 26 
                 ++sg+l +++ Ll++ ++
  KHJ30292.1 241 VKSGNLGSLKDLLSRLKN 258
                 568999999999987544 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 3.7e-05
       Ank_4   5 LhyaaisgrlelvrlLlekg.adinaqdnrsGetalhiAakrgnv 48 
                 +  a++ g+ e+++lL+++g +d+   d+++ +++lh Aa  gn+
  KHJ30292.1 278 FLTAINRGPQESLQLLIDTGlVDLQSEDDINERNCLHQAAIYGNL 322
                 568999*************84665555999999*******99985 PP

  == domain 3  score: 34.8 bits;  conditional E-value: 6.7e-12
       Ank_4   2 ltaLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAakrgnveilklLl 55 
                 + +Lh+aai+g+l +++  l  g+ + +  +++G+ +lh+A+++g++++++ Ll
  KHJ30292.1 310 RNCLHQAAIYGNLFVLKEGLKGGVAVSRA-DAYGQIPLHYACMHGHLDMVETLL 362
                 789*****************779*****7.*********************997 PP

  == domain 4  score: 38.4 bits;  conditional E-value: 5.2e-13
       Ank_4   4 aLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAakrgnveilklLl 55 
                 +Lhya+++g+l++v+ Ll+++++    ++ + +t+l++A++rg++++++ L+
  KHJ30292.1 345 PLHYACMHGHLDMVETLLDSDPSTIDFIDHDRFTPLIHAIRRGHFDCVEHLI 396
                 79*****************98773334688899***************9665 PP

  == domain 5  score: 5.1 bits;  conditional E-value: 0.014
       Ank_4   8 aaisgrlelvrlLlekgadinaqdnrsGetalhiAakr 45 
                 a+ +g + +v+lLl +ga+i    + +G+ + h +a+ 
  KHJ30292.1 416 ACDYGSVSIVELLLKHGAEILS--DVEGLFPQHLVARS 451
                 8999***************755..55565555555555 PP

  == domain 6  score: 17.3 bits;  conditional E-value: 2.1e-06
       Ank_4   6 hyaaisgrlelvrlLl.ekgadinaqdnrsGetalhiAakrgnveilklLl 55 
                 h  a sg+++ + lLl +++ad+n +d  + +t+l +Aa+ gnv +++ Ll
  KHJ30292.1 446 HLVARSGKTPELLLLLkQHNADLNQVDKLYSWTPLFHAASEGNVLCIRILL 496
                 5566688888888888578*******8899*************99998886 PP

  == domain 7  score: 27.9 bits;  conditional E-value: 9.9e-10
       Ank_4   2 ltaLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAakrgnveilkl 53 
                 +t+L++aa++g++ ++r+Ll+ g+++    ++ G++a+++Aa+ g++++ +l
  KHJ30292.1 477 WTPLFHAASEGNVLCIRILLDVGVQLEIL-DEKGLSAMYYAAWEGHLDCMQL 527
                 699*****************99*999998.*******************886 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00069       1.8       1      49 [.     293     342 ..     293     345 .. 0.74
   2 !   15.6   0.0   5.9e-06     0.015       7      43 ..     333     367 ..     329     373 .. 0.80
   3 !   14.4   0.0   1.4e-05     0.036      15      36 ..     375     396 ..     369     407 .. 0.84
   4 !   13.6   0.0   2.4e-05     0.062      18      41 ..     411     434 ..     397     436 .. 0.84
   5 !   10.2   0.0    0.0003      0.77      13      53 ..     438     480 ..     435     483 .. 0.91
   6 !   11.0   0.0   0.00017      0.43       3      35 ..     497     528 ..     494     534 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00069
       Ank_5   1 Llehgpadvnrldgggn.tpLhvAakygaadvvrlLlargadlnltdsrG 49 
                 L++ g +d++ +d   + ++Lh+Aa yg++ v+++ l+ g++    d++G
  KHJ30292.1 293 LIDTGLVDLQSEDDINErNCLHQAAIYGNLFVLKEGLKGGVAVSRADAYG 342
                 566677777777777777***********988888777777766666666 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 5.9e-06
       Ank_5   7 advnrldgggntpLhvAakygaadvvrlLlargadln 43 
                 ++v r d +g+ pLh+A+ +g++d+v+ Ll   +d+ 
  KHJ30292.1 333 VAVSRADAYGQIPLHYACMHGHLDMVETLL--DSDPS 367
                 556666778888******************..77765 PP

  == domain 3  score: 14.4 bits;  conditional E-value: 1.4e-05
       Ank_5  15 ggntpLhvAakygaadvvrlLl 36 
                 +++tpL++A+++g++d+v+ L+
  KHJ30292.1 375 DRFTPLIHAIRRGHFDCVEHLI 396
                 345******************9 PP

  == domain 4  score: 13.6 bits;  conditional E-value: 2.4e-05
       Ank_5  18 tpLhvAakygaadvvrlLlargad 41 
                  pL++A+ yg+ ++v+lLl++ga 
  KHJ30292.1 411 VPLNLACDYGSVSIVELLLKHGAE 434
                 69*******************986 PP

  == domain 5  score: 10.2 bits;  conditional E-value: 0.0003
       Ank_5  13 dgggntpLhvAakygaadvvrlLl.argadlnltdsrG.ltal 53 
                 d +g  p h+ a+ g  + ++lLl  ++adln+ d+ + +t+l
  KHJ30292.1 438 DVEGLFPQHLVARSGKTPELLLLLkQHNADLNQVDKLYsWTPL 480
                 667888889********************************98 PP

  == domain 6  score: 11.0 bits;  conditional E-value: 0.00017
       Ank_5   3 ehgpadvnrldgggntpLhvAakygaadvvrlL 35 
                 + g +++  ld++g +++ +Aa+ g++d+++l+
  KHJ30292.1 497 DVG-VQLEILDEKGLSAMYYAAWEGHLDCMQLI 528
                 555.89999********************9975 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.036        92       2      19 ..     309     326 ..     308     336 .. 0.81
   2 !   16.5   0.0   3.4e-06    0.0086       5      23 ..     345     363 ..     341     370 .. 0.86
   3 !    9.2   0.0   0.00081       2.1       3      27 ..     377     400 ..     375     404 .. 0.84
   4 !   14.6   0.0   1.4e-05     0.037       5      29 ..     412     435 ..     412     437 .. 0.94
   5 !    8.2   0.0    0.0017       4.5       7      30 ..     446     469 ..     441     470 .. 0.88
   6 !   10.8   0.0   0.00025      0.64       3      28 ..     477     501 ..     475     504 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.036
       Ank_3   2 GetpLhlAarsgnleivk 19 
                  ++ Lh+Aa +gnl ++k
  KHJ30292.1 309 ERNCLHQAAIYGNLFVLK 326
                 5889*********87665 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 3.4e-06
       Ank_3   5 pLhlAarsgnleivkfLle 23 
                 pLh+A+++g+l++v+ Ll+
  KHJ30292.1 345 PLHYACMHGHLDMVETLLD 363
                 9*****************9 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00081
       Ank_3   3 etpLhlAarsgnleivkfLlenkga 27 
                  tpL +A+r g+++ v+ L+  + a
  KHJ30292.1 377 FTPLIHAIRRGHFDCVEHLIL-RSA 400
                 59************9999997.554 PP

  == domain 4  score: 14.6 bits;  conditional E-value: 1.4e-05
       Ank_3   5 pLhlAarsgnleivkfLlenkgadv 29 
                 pL lA+ +g+++iv++Ll+ +ga++
  KHJ30292.1 412 PLNLACDYGSVSIVELLLK-HGAEI 435
                 89*****************.89987 PP

  == domain 5  score: 8.2 bits;  conditional E-value: 0.0017
       Ank_3   7 hlAarsgnleivkfLlenkgadvn 30 
                 hl+arsg+++ + +Ll++++ad+n
  KHJ30292.1 446 HLVARSGKTPELLLLLKQHNADLN 469
                 9********768888888*****9 PP

  == domain 6  score: 10.8 bits;  conditional E-value: 0.00025
       Ank_3   3 etpLhlAarsgnleivkfLlenkgad 28 
                 +tpL++Aa+ gn+  ++ Ll+  g+ 
  KHJ30292.1 477 WTPLFHAASEGNVLCIRILLD-VGVQ 501
                 9************98*****9.6765 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.96   2.5e+03      10      31 ..     282     305 ..     277     306 .. 0.79
   2 ?   -2.4   0.0       3.2   8.1e+03       4      18 ..     311     325 ..     308     332 .. 0.70
   3 !   18.0   0.0   1.1e-06    0.0028       1      27 [.     341     366 ..     341     371 .. 0.85
   4 !   10.3   0.0    0.0003      0.78       2      25 ..     376     400 ..     375     409 .. 0.77
   5 !   14.4   0.1   1.6e-05     0.041       5      27 ..     412     435 ..     410     438 .. 0.92
   6 ?    4.2   0.1     0.026        67      17      32 .]     457     473 ..     446     473 .. 0.65
   7 !    9.0   0.0   0.00077         2       3      30 ..     477     505 ..     475     507 .. 0.83
   8 ?    3.3   0.0     0.049   1.2e+02       2      27 ..     509     533 ..     508     538 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.96
                 HHHTTHHHHHHHH.TT.TSTTCBT CS
         Ank  10 atngkkriiklLL.hG.Anlnald 31 
                 +++g  + ++lL+  G  +l++ d
  KHJ30292.1 282 INRGPQESLQLLIdTGlVDLQSED 305
                 566777899****77999998877 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 3.2
                 BHHHHHHHHTTHHHH CS
         Ank   4 TPLHlAatngkkrii 18 
                  +LH Aa +g++ ++
  KHJ30292.1 311 NCLHQAAIYGNLFVL 325
                 689*88868875555 PP

  == domain 3  score: 18.0 bits;  conditional E-value: 1.1e-06
                 TSBBHHHHHHHHTTHHHHHHHHTTTST CS
         Ank   1 dGnTPLHlAatngkkriiklLLhGAnl 27 
                 +G  PLH+A++ g++++++ LL++ ++
  KHJ30292.1 341 YGQIPLHYACMHGHLDMVETLLDS-DP 366
                 6889******************54.66 PP

  == domain 4  score: 10.3 bits;  conditional E-value: 0.0003
                 SBBHHHHHHHHTTHHHHHHHH.TTT CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGA 25 
                  +TPL  A+++g+ ++++ L+ ++A
  KHJ30292.1 376 RFTPLIHAIRRGHFDCVEHLIlRSA 400
                 59****************8887654 PP

  == domain 5  score: 14.4 bits;  conditional E-value: 1.6e-05
                 HHHHHHHHTTHHHHHHHH.TTTST CS
         Ank   5 PLHlAatngkkriiklLL.hGAnl 27 
                 PL lA+ +g+++i++lLL hGA++
  KHJ30292.1 412 PLNLACDYGSVSIVELLLkHGAEI 435
                 899*******************86 PP

  == domain 6  score: 4.2 bits;  conditional E-value: 0.026
                 HHHHHH..TTTSTTCBTT CS
         Ank  17 iiklLL..hGAnlnaldn 32 
                  + lLL  h A+ln++d+
  KHJ30292.1 457 LL-LLLkqHNADLNQVDK 473
                 44.5678779*****995 PP

  == domain 7  score: 9.0 bits;  conditional E-value: 0.00077
                 BBHHHHHHHHTTHHHHHHHHT.TTSTTCB CS
         Ank   3 nTPLHlAatngkkriiklLLh.GAnlnal 30 
                 +TPL  Aa++g++ +i+ LL+ G  l +l
  KHJ30292.1 477 WTPLFHAASEGNVLCIRILLDvGVQLEIL 505
                 7******************9658656555 PP

  == domain 8  score: 3.3 bits;  conditional E-value: 0.049
                 SBBHHHHHHHHTTHHHHHHHHTTTST CS
         Ank   2 GnTPLHlAatngkkriiklLLhGAnl 27 
                 G ++  +Aa++g++++ + L+++A++
  KHJ30292.1 509 GLSAMYYAAWEGHLDCMQ-LISSASI 533
                 6788899***********.8877776 PP

>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.6   2.4e-06    0.0061       2      33 ..      10      43 ..      10      49 .. 0.88
   2 !    7.6   6.6    0.0012       3.1     176     219 ..      64     107 ..      44     123 .. 0.76
   3 !   28.4   2.7     6e-10   1.5e-06     322     382 ..     110     173 ..     104     175 .. 0.84
   4 ?   -3.8   0.1       3.5   8.9e+03      25      52 ..     249     276 ..     247     281 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 2.4e-06
         SPX  2 KFakeLeenlv..pEWrdaYldYkqLKKlIkkvq 33
                KF+k+ +      p   + +++Yk+LKKlIkk++
  KHJ30292.1 10 KFGKQIQKLQLelPDYSASFVNYKALKKLIKKLS 43
                9*****985556********************97 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0012
         SPX 176 etrplraekeFferLdseLnkvetFykakeeefterlesLrkql 219
                 e+ ++ +++ F+ +   eL+kv+ +y +ke e+  rl++L +  
  KHJ30292.1  64 EEGLQVNKASFLFQFERELEKVNALYVQKEAELQIRLKTLLEKK 107
                 3333349999****************************998765 PP

  == domain 3  score: 28.4 bits;  conditional E-value: 6e-10
         SPX 322 rkenrvklkkakk.....klkkafvelYrgLelLKsYqeLNrtAFrKIlKKfDKvtaltaskrymk 382
                 +k   ++  ++++     +l + f+++ ++L +L++  e+N +AF+KIlKK+DK+++ ++++ y++
  KHJ30292.1 110 LK--SKNHITSRRfakftTLEEGFQQFVNDLNKLQQLVEVNGIAFSKILKKWDKISKSKTKELYIS 173
                 44..45555556666678899**************************************9999986 PP

  == domain 4  score: -3.8 bits;  conditional E-value: 3.5
         SPX  25 LKKlIkkvqreleslgleaetlrellnr 52 
                 LK l+ ++++  +s++++++ lre+  r
  KHJ30292.1 249 LKDLLSRLKNSVQSNSSRNSILRERITR 276
                 8999999999888888888888887665 PP

>> GDPD  Glycerophosphoryl diester phosphodiesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2      0.24   6.2e+02      76     124 ..     111     152 ..      56     227 .. 0.63
   2 !   34.8   0.0   5.5e-12   1.4e-08      25     231 ..     748     983 ..     740    1008 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.24
                 TCCCCSCCCSSGCCB...BHHHHHHHHHHCCSEEEEEEECCCCCCCHHH CS
        GDPD  76 enkaqlsenrvrlefpfptleevlkkpqnvglnieikipmlseakeeee 124
                 ++k+++   r+    +f+tlee ++       n   k+++l+e+    +
  KHJ30292.1 111 KSKNHITSRRF---AKFTTLEEGFQQFV----NDLNKLQQLVEVNGIAF 152
                 22344444444...68999999997633....33344444444444333 PP

  == domain 2  score: 34.8 bits;  conditional E-value: 5.5e-12
                 SEEEEEEEE-TTS-EEE-SSSBSTTTCSCCCH.BGGGS-HHHHHTST...........ECCTTCCCCSCCCSSGCC...............B...BHHH CS
        GDPD  25 dyiEfDvqlTkDgvpVvlHDfnldrttdvagrldvkdltleelkrld...........kiakenkaqlsenrvrle...............fpfptlee 97 
                 dyi + vq  +DgvpV+    n++ ++   +   ++ +t+e++  +            +               l+               ++ + l++
  KHJ30292.1 748 DYIQLFVQQLSDGVPVLWPKGNMNHMGIEFP---ISCMTYEQFIYAGsrqaktaqeltE---------------LQswplkgtaevhqilsNSAISLKD 828
                 8999999*****************9998888...**********999554433333331...............333344455667777778889**** PP

                 HHHH.HHHCCSEEEEEEECCCCCCCHHHHHHTCHHHCCCCCSCHHTT..STT.........CSCEEEESTHHHHHHHHHTCTCTEEEEEEHHHHHHC-E CS
        GDPD  98 vlkk.pqnvglnieikipmlseakeeeelqivkeilksvdeilkkvlkkadk.........rkvifssfnpdilkllrekqpklpllflteggteaead 186
                 +l+  p+++++n++i +p   + k+  +  ++  i+ + d il+ v++ a+          r +ifss n + +++l+ kqp++p+++  + + e++  
  KHJ30292.1 829 ALELlPRGMHVNLQILYPTSYNEKKLNF-GFANSINDFCDAILSAVFDCARTirerfpdamRSIIFSSSNQTVCTALNWKQPNYPIFLNNDLRCESTFS 926
                 *********************9999999.8*************99777665422223333378*******************88777655554444433 PP

                 .............EECHCCCCCCCTCCCCHHCCCHCCCEB.CHHHHHHHTT-EEEEB CS
        GDPD 187 ............ssleraakfakadallgevsavaeglgdpdlVkraksrglvvhvy 231
                             +s+++a++ ak  +++g +  ++ + ++p+lV+++ks+glv++  
  KHJ30292.1 927 dsrssmtreiqsISVKEAVRIAKDNNFMGLFCSSSFLEMAPKLVNAIKSQGLVLLIN 983
                 444445558999999999999999999999999999999*************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1022 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       795  (0.0443416); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.80u 0.28s 00:00:01.08 Elapsed: 00:00:00.45
# Mc/sec: 6853.09
//
Query:       KHJ30293.1  [L=420]
Description: putative cue domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-12   45.4   0.0    9.6e-12   44.4   0.0    1.5  1  CUE       CUE domain


Domain annotation for each model (and alignments):
>> CUE  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.4   0.0   5.3e-16   9.6e-12       6      42 .]      80     116 ..      76     116 .. 0.96

  Alignments for each domain:
  == domain 1  score: 44.4 bits;  conditional E-value: 5.3e-16
                 HHHHHHSTTS-HHHHHHHHHHCTTTHHHHHHHHHHCC CS
         CUE   6 etLkemFPdldeevIravLrasngnvEatinaLLegs 42 
                 +tLk++FP++d  vI+avLras+g +E+++naLL +s
  KHJ30293.1  80 DTLKDAFPSIDIAVIKAVLRASGGQIEPAFNALLGMS 116
                 69********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3020.45
//
Query:       KHJ30294.1  [L=576]
Description: putative glycoside hydrolase subgroup catalytic core protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (576 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 4124.85
//
Query:       KHJ30295.1  [L=281]
Description: hypothetical protein EV44_g3368 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.07   12.8   0.1       0.13   11.9   0.1    1.4  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   7.4e-06      0.13      12      63 ..     114     165 ..     109     170 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.4e-06
  Retrotran_gag_2  12 IvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmke 63 
                      ++ sis++ll ++k+++t+ e+   L++ +  +++a+k  ++ k  + k k+
       KHJ30295.1 114 VLGSISEKLLPQLKGKSTVSEILLYLNKRFRPTDQARKQEVISKWSKVKEKP 165
                      6789**********************************99999888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2152.70
//
Query:       KHJ30296.1  [L=177]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0027   17.7   0.4     0.0027   17.7   0.4    3.4  4  zf-CCHC         Zinc knuckle
  ------ inclusion threshold ------
      0.042   13.7   1.5      0.042   13.7   1.5    3.0  3  zf-CCHC_6       Zinc knuckle
       0.24   11.9   0.2       0.24   11.9   0.2    1.8  2  GP68            Phage protein Gp68


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   1.4         1     6e+03       3       8 ..      47      52 ..      46      53 .. 0.79
   2 ?   -2.9   0.1       1.5   8.8e+03      13      16 ..      56      59 ..      54      60 .. 0.68
   3 !   17.7   0.4   4.6e-07    0.0027       2      16 ..      64      78 ..      63      80 .. 0.91
   4 !    7.2   0.9   0.00092       5.5       2       9 ..      83      90 ..      83      94 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1
                TSSSSS CS
     zf-CCHC  3 CynCGe 8 
                C +C++
  KHJ30296.1 47 CKRCNG 52
                999985 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.5
                TTTS CS
     zf-CCHC 13 ardC 16
                +++C
  KHJ30296.1 56 SKNC 59
                6788 PP

  == domain 3  score: 17.7 bits;  conditional E-value: 4.6e-07
                CTSSSSSSSSTTTTS CS
     zf-CCHC  2 kCynCGepGHiardC 16
                 C nCG++ Hia  C
  KHJ30296.1 64 SCANCGSTNHIADIC 78
                6************99 PP

  == domain 4  score: 7.2 bits;  conditional E-value: 0.00092
                CTSSSSSS CS
     zf-CCHC  2 kCynCGep 9 
                kC+nCG+p
  KHJ30296.1 83 KCRNCGGP 90
                7*****87 PP

>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.8   7.4         3   1.8e+04       4       8 ..      65      69 ..      47      73 .. 0.59
   2 ?    0.6   0.6     0.084     5e+02       4      12 ..      65      73 ..      63      76 .. 0.80
   3 ?   13.7   1.5     7e-06     0.042       3      19 ..      83      98 ..      81     121 .. 0.76

  Alignments for each domain:
  == domain 1  score: -5.8 bits;  conditional E-value: 3
   zf-CCHC_6  4 CknCG 8 
                C nCG
  KHJ30296.1 65 CANCG 69
                55555 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.084
   zf-CCHC_6  4 CknCGAFGH 12
                C nCG   H
  KHJ30296.1 65 CANCGSTNH 73
                *****8666 PP

  == domain 3  score: 13.7 bits;  conditional E-value: 7e-06
   zf-CCHC_6  3 KCknCGAFGHtarSkrC 19
                KC+nCG   H+a S+rC
  KHJ30296.1 83 KCRNCGG-PHRANSRRC 98
                9*****9.5******** PP

>> GP68  Phage protein Gp68
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2         1   6.2e+03       6      21 ..      53      68 ..      50      74 .. 0.78
   2 ?   11.9   0.2   3.9e-05      0.24      18      65 ..      95     142 ..      81     150 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1
        GP68  6 nhpslrspiaphetag 21
                 hps     ap  + +
  KHJ30296.1 53 HHPSKNCSRAPSCANC 68
                6999999999876655 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 3.9e-05
        GP68  18 etagvlrmrraGykGaailkllklrGtrlvnqmqraldaetaaaraGr 65 
                    ++ r  r+G   ++ +k  +  G r  + +qra  ae++aa   r
  KHJ30296.1  95 SRRCLARPTRSGVPSKEQMKTYRQMGEREYQAVQRARIAEEKAATVDR 142
                 3469999***********************************998777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       821  (0.0457917); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.25s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 1439.84
//
Query:       KHJ30297.1  [L=674]
Description: putative cell cycle control protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-27   95.4  63.1    2.3e-14   53.1   2.1   12.2 11  HAT              HAT (Half-A-TPR) repeat
    4.8e-20   70.5  23.6     0.0027   18.4   0.1   11.4 13  TPR_14           Tetratricopeptide repeat
    2.2e-18   66.5   0.1    0.00026   21.4   0.0    6.9  7  TPR_19           Tetratricopeptide repeat
    1.4e-15   58.0  22.6     0.0017   18.4   0.7    5.7  6  Suf              Suppressor of forked protein (Suf)
    5.6e-10   38.6  22.0      0.096   12.8   0.0   10.2 11  TPR_2            Tetratricopeptide repeat
      4e-08   33.8   9.9        1.7    9.4   0.0    7.0  6  TPR_16           Tetratricopeptide repeat
      5e-06   25.9  17.3       0.31   10.2   0.1    6.2  7  TPR_15           Tetratricopeptide repeat
    1.1e-05   25.3  16.4        3.6    8.0   0.0    9.3  9  TPR_8            Tetratricopeptide repeat
    1.8e-05   24.8   8.0      0.013   15.9   0.0    6.1  6  TPR_17           Tetratricopeptide repeat
    7.5e-05   23.1  23.2       0.79   10.5   0.2    9.1  9  TPR_6            Tetratricopeptide repeat
     0.0044   17.2   1.8         11    6.3   0.0    4.7  5  ANAPC3           Anaphase-promoting complex, cyclosome, subun
     0.0056   16.6  11.1       0.63   10.2   0.3    5.7  5  TPR_7            Tetratricopeptide repeat
     0.0097   14.6   6.4      0.019   13.6   6.4    1.4  1  EVC2_like        Ellis van Creveld protein 2 like protein
  ------ inclusion threshold ------
       0.03   14.5   3.9         31    4.8   0.1    5.3  5  TPR_9            Tetratricopeptide repeat
      0.073   13.1  23.6       0.16   12.0   1.1    6.6  7  U3_assoc_6       U3 small nucleolar RNA-associated protein 6
       0.13   12.8   0.8        2.8    8.6   0.0    3.4  2  QIL1             MICOS complex subunit MIC13, QIL1
       0.22   11.6  12.4        8.2    6.6   0.1    5.9  6  Fis1_TPR_C       Fis1 C-terminal tetratricopeptide repeat
       0.23   11.3  13.9         23    5.0   0.0    6.8  7  TPR_1            Tetratricopeptide repeat
       0.45   10.8  23.4        6.3    7.2   0.0    7.8  9  TPR_12           Tetratricopeptide repeat
        2.2    8.7   6.9        5.7    7.4   1.5    2.9  2  PBP1_TM          Transmembrane domain of transglycosylase PBP
        6.2    6.8  23.6          2    8.4   0.1    7.1  7  Mad3_BUB1_I      Mad3/BUB1 homology region 1


Domain annotation for each model (and alignments):
>> HAT  HAT (Half-A-TPR) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   1.0    0.0013       1.1      18      30 ..      70      82 ..      54      84 .. 0.78
   2 !   17.3   0.0   4.1e-06    0.0035       1      26 [.      86     112 ..      86     116 .. 0.95
   3 ?    2.2   0.0      0.21   1.8e+02       3      31 ..     122     151 ..     120     152 .. 0.87
   4 ?    2.2   0.0       0.2   1.7e+02       7      31 ..     160     184 ..     156     185 .. 0.89
   5 !   53.1   2.1   2.7e-17   2.3e-14       2      32 .]     188     218 ..     187     218 .. 0.96
   6 ?   -2.3   0.1       5.3   4.6e+03      24      30 ..     247     253 ..     246     255 .. 0.83
   7 ?    5.0   1.6     0.029        25       1      11 [.     257     267 ..     257     269 .. 0.93
   8 ?    6.4   0.0      0.01       8.6       1      10 [.     379     388 ..     379     392 .. 0.93
   9 !   12.3   0.5   0.00015      0.12       2      30 ..     451     480 ..     450     481 .. 0.92
  10 !   23.4   0.3   4.8e-08   4.1e-05       2      30 ..     521     549 ..     520     551 .. 0.96
  11 ?    2.8   0.0      0.14   1.2e+02       5      12 ..     576     583 ..     574     586 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0013
                --HHHHHHHHHHH CS
         HAT 18 peVkNWikyArFE 30
                ++ +NW++yA++E
  KHJ30297.1 70 INMNNWMRYAQWE 82
                99********998 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 4.1e-06
                 --HHHHHHHHHHHHHHS.--HHHHHHH CS
         HAT   1 kEidRAReiYeRFvvVH.peVkNWiky 26 
                 kE  RAR+++eR + V    ++ Wi+y
  KHJ30297.1  86 KEFQRARSVFERALDVDsTSITLWIRY 112
                 899**************9********9 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.21
                 HHHHHHHHHHHHHHS--H.HHHHHHHHHHH CS
         HAT   3 idRAReiYeRFvvVHpeV.kNWikyArFEE 31 
                 i+ AR+  +R v + p V k W ky   EE
  KHJ30297.1 122 INHARNLLDRAVTILPRVdKLWYKYCYMEE 151
                 788**************9556****99998 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.2
                 HHHHHHHHHHS--HHHHHHHHHHHH CS
         HAT   7 ReiYeRFvvVHpeVkNWikyArFEE 31 
                 R+++eR++   p+ + W  y + E 
  KHJ30297.1 160 RQVFERWMAWEPDETAWSSYIKLEK 184
                 9****************99998885 PP

  == domain 5  score: 53.1 bits;  conditional E-value: 2.7e-17
                 -HHHHHHHHHHHHHHS--HHHHHHHHHHHHH CS
         HAT   2 EidRAReiYeRFvvVHpeVkNWikyArFEEe 32 
                 E  RARei++RF  VHpe +NWik+A+FEEe
  KHJ30297.1 188 EFQRAREIFQRFTLVHPEPRNWIKWAKFEEE 218
                 789***************************7 PP

  == domain 6  score: -2.3 bits;  conditional E-value: 5.3
                 HHHHHHH CS
         HAT  24 ikyArFE 30 
                 i yAr+E
  KHJ30297.1 247 IAYARYE 253
                 78****9 PP

  == domain 7  score: 5.0 bits;  conditional E-value: 0.029
                 --HHHHHHHHH CS
         HAT   1 kEidRAReiYe 11 
                 kE +RAR iY+
  KHJ30297.1 257 KEYERARAIYK 267
                 8*********6 PP

  == domain 8  score: 6.4 bits;  conditional E-value: 0.01
                 --HHHHHHHH CS
         HAT   1 kEidRAReiY 10 
                 k i+RAR+iY
  KHJ30297.1 379 KDIERARQIY 388
                 78******** PP

  == domain 9  score: 12.3 bits;  conditional E-value: 0.00015
                 -HHHHHHHHHHHHHHS.--HHHHHHHHHHH CS
         HAT   2 EidRAReiYeRFvvVH.peVkNWikyArFE 30 
                 E  R R  Ye+++     + + Wik+A  E
  KHJ30297.1 451 EFSRCRTLYEKYIEWNnANCQAWIKFAELE 480
                 678***********999**********877 PP

  == domain 10  score: 23.4 bits;  conditional E-value: 4.8e-08
                 -HHHHHHHHHHHHHHS--HHHHHHHHHHH CS
         HAT   2 EidRAReiYeRFvvVHpeVkNWikyArFE 30 
                 E dRAR+ YeR +     Vk Wi +A FE
  KHJ30297.1 521 EYDRARQLYERLLEKTDHVKVWISFAHFE 549
                 89**************************9 PP

  == domain 11  score: 2.8 bits;  conditional E-value: 0.14
                 HHHHHHHH CS
         HAT   5 RAReiYeR 12 
                 RAR+i++R
  KHJ30297.1 576 RARNIFQR 583
                 *******9 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       4.4   3.8e+03      20      31 ..      22      33 ..      20      46 .. 0.79
   2 !   18.4   0.1   3.1e-06    0.0027       4      43 ..      75     114 ..      72     115 .. 0.94
   3 ?    6.4   0.0     0.023        19       3      42 ..     108     147 ..     108     149 .. 0.91
   4 !    8.8   0.0    0.0039       3.3       3      43 ..     175     214 ..     173     215 .. 0.88
   5 ?    6.7   0.8     0.018        16       3      42 ..     245     284 ..     243     286 .. 0.87
   6 ?    3.9   0.0      0.14   1.2e+02      23      44 .]     309     330 ..     306     330 .. 0.90
   7 !   12.3   0.0   0.00027      0.23       4      41 ..     324     363 ..     322     371 .. 0.80
   8 ?    0.3   0.0         2   1.7e+03      11      30 ..     375     394 ..     366     398 .. 0.78
   9 ?    6.1   0.0     0.027        23       2      36 ..     404     438 ..     403     445 .. 0.90
  10 ?   -0.9   0.0       4.9   4.2e+03       7      35 ..     442     468 ..     437     479 .. 0.72
  11 ?   -0.5   0.1       3.6   3.1e+03       3      30 ..     472     499 ..     471     503 .. 0.86
  12 !   17.6   0.0   5.8e-06    0.0049       3      31 ..     508     536 ..     505     545 .. 0.88
  13 ?   -0.6   0.1       3.8   3.3e+03      18      31 ..     575     587 ..     565     600 .. 0.74

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 4.4
      TPR_14 20 Aiallrralala 31
                A++llr+a++++
  KHJ30297.1 22 AEQLLREAVDRQ 33
                99******9853 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 3.1e-06
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 ++++a+ +l++ ++++A+ +++ral+ + ++ ++w+++ +
  KHJ30297.1  75 WMRYAQWELEQKEFQRARSVFERALDVDSTSITLWIRYIE 114
                 99***********************************986 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.023
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawllla 42 
                 ++ ++ ea++  +    A++ll+ra+   P  + +w+ + 
  KHJ30297.1 108 LWIRYIEAEMKTRSINHARNLLDRAVTILPRVDKLWYKYC 147
                 5889999999999*********************998875 PP

  == domain 4  score: 8.8 bits;  conditional E-value: 0.0039
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 a+  + +++ + G++++A+++++r    +P+ ++ w+ +a+
  KHJ30297.1 175 AWSSYIKLEKRYGEFQRAREIFQRFTLVHPE-PRNWIKWAK 214
                 7889999*****************9999998.777777775 PP

  == domain 5  score: 6.7 bits;  conditional E-value: 0.018
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawllla 42 
                 +  a+a+++  l ++++A+a+++ al++ P +  + l+ a
  KHJ30297.1 245 LFIAYARYESKLKEYERARAIYKYALDRLPRSKSLALHKA 284
                 5679**************************9987777766 PP

  == domain 6  score: 3.9 bits;  conditional E-value: 0.14
      TPR_14  23 llrralalaPddaeawlllaql 44 
                 +++++l+ +P++ ++w+  a+l
  KHJ30297.1 309 YYEELLKENPKNYDIWFDSARL 330
                 89**************998886 PP

  == domain 7  score: 12.3 bits;  conditional E-value: 0.00027
      TPR_14   4 llalaeallalGdpdeAiallrralalaP..ddaeawlll 41 
                 + + a++++++Gdpd+ +++++ a+a+ P   + + w+++
  KHJ30297.1 324 WFDSARLEETAGDPDKVRDVYENAIAQVPptLEKRHWRRY 363
                 78889*********************98833233566555 PP

  == domain 8  score: 0.3 bits;  conditional E-value: 2
      TPR_14  11 llalGdpdeAiallrralal 30 
                 +l++ d ++A++++ ++l+l
  KHJ30297.1 375 ELESKDIERARQIYLECLKL 394
                 468899********999987 PP

  == domain 9  score: 6.1 bits;  conditional E-value: 0.027
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddae 36 
                 + +l+ a+++ ++ ++  A++ l +a+  +P+d  
  KHJ30297.1 404 KIWLLKAHFEVRQHNLSLARKTLGQAIGMCPKDKL 438
                 57999**************************9865 PP

  == domain 10  score: -0.9 bits;  conditional E-value: 4.9
      TPR_14   7 laeallalGdpdeAiallrralalaPdda 35 
                 + e++l l ++ + ++l++++++  +++a
  KHJ30297.1 442 YIELELKLFEFSRCRTLYEKYIE--WNNA 468
                 6677788889999******9988..6555 PP

  == domain 11  score: -0.5 bits;  conditional E-value: 3.6
      TPR_14   3 allalaeallalGdpdeAiallrralal 30 
                 a+ + ae+++ l+d+++ +a+++ a+++
  KHJ30297.1 472 AWIKFAELERGLDDLERTRAIFELAIEQ 499
                 7888899999999999999999999885 PP

  == domain 12  score: 17.6 bits;  conditional E-value: 5.8e-06
      TPR_14   3 allalaeallalGdpdeAiallrralala 31 
                 +++a+ +++++ G++d+A++l++r+l++ 
  KHJ30297.1 508 LWKAYIDFEEEEGEYDRARQLYERLLEKT 536
                 699***********************964 PP

  == domain 13  score: -0.6 bits;  conditional E-value: 3.8
      TPR_14  18 deAiallrralala 31 
                  +A+++++ral+ +
  KHJ30297.1 575 TRARNIFQRALK-N 587
                 589*******98.4 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0     3e-07   0.00026       2      52 ..      83     133 ..      82     145 .. 0.94
   2 ?    5.3   0.0     0.033        28      10      62 ..     125     177 ..     124     182 .. 0.90
   3 ?    1.7   0.0      0.43   3.7e+02      12      56 ..     161     204 ..     152     213 .. 0.73
   4 ?    6.0   0.1      0.02        17      30      57 ..     248     275 ..     227     286 .. 0.60
   5 !   11.5   0.0   0.00037      0.32      13      49 ..     309     345 ..     307     355 .. 0.87
   6 !    9.1   0.0    0.0022       1.9       2      51 ..     376     429 ..     375     440 .. 0.93
   7 ?    6.4   0.2     0.015        13       3      20 ..     518     535 ..     516     593 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 3e-07
      TPR_19   2 laegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalp 52 
                 l+++ +++A + +e+al+ d  +  ++++++ea +++  ++ A++lLd++ 
  KHJ30297.1  83 LEQKEFQRARSVFERALDVDSTSITLWIRYIEAEMKTRSINHARNLLDRAV 133
                 89**********************************************986 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.033
      TPR_19  10 AlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddarya 62 
                 A +ll +a +  p  + +++ ++     lg++   +++ ++ ++++pd+ +++
  KHJ30297.1 125 ARNLLDRAVTILPRVDKLWYKYCYMEEMLGNIPGTRQVFERWMAWEPDETAWS 177
                 889*********************************************55444 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.43
      TPR_19  12 alleqalqedpknaearllLAeallalgqldeAealLdalpeedp 56 
                 + +e+ ++ +p+  +    ++++    g+++ A+++ ++  +  p
  KHJ30297.1 161 QVFERWMAWEPDETAWSS-YIKLEKRYGEFQRAREIFQRFTLVHP 204
                 556666666775555555.88888889999999999988666555 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.02
      TPR_19  30 lLAeallalgqldeAealLdalpeedpd 57 
                 ++A+   +l++++ A+a+ + +++  p 
  KHJ30297.1 248 AYARYESKLKEYERARAIYKYALDRLPR 275
                 5555555555555555555555555444 PP

  == domain 5  score: 11.5 bits;  conditional E-value: 0.00037
      TPR_19  13 lleqalqedpknaearllLAeallalgqldeAealLd 49 
                 ++e++l+e+pkn +++ + A++   +g++d+ +++ +
  KHJ30297.1 309 YYEELLKENPKNYDIWFDSARLEETAGDPDKVRDVYE 345
                 799***************************9887765 PP

  == domain 6  score: 9.1 bits;  conditional E-value: 0.0022
      TPR_19   2 laegdyaeAlalleqalqedpk....naearllLAeallalgqldeAealLdal 51 
                 l+++d ++A +++ + l+  p+     a ++ll A   + + +l  A+++L ++
  KHJ30297.1 376 LESKDIERARQIYLECLKLIPHkkftFAKIWLLKAHFEVRQHNLSLARKTLGQA 429
                 7899***********************************************876 PP

  == domain 7  score: 6.4 bits;  conditional E-value: 0.015
      TPR_19   3 aegdyaeAlalleqalqe 20 
                 +eg y++A +l+e++l++
  KHJ30297.1 518 EEGEYDRARQLYERLLEK 535
                 689999999999997665 PP

>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.7     2e-06    0.0017      20     136 ..      57     189 ..      52     200 .. 0.92
   2 ?    0.5   0.0      0.57   4.9e+02     109     128 ..     208     227 ..     187     239 .. 0.71
   3 !   16.7   1.1   6.7e-06    0.0058      71     130 ..     244     302 ..     238     322 .. 0.82
   4 ?   -1.6   0.1       2.5   2.1e+03      79      79 ..     370     370 ..     305     468 .. 0.61
   5 !   17.7   0.1   3.2e-06    0.0027      83     135 ..     483     534 ..     474     547 .. 0.92
   6 !   16.2   0.8   9.3e-06    0.0079      86     138 ..     574     629 ..     570     644 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 2e-06
         Suf  20 aRkvFkkARkkprltyevyvasAllEyyiskdkkvAtkIFelGlKkFpedeefvlkYldyLislnddnnaRvlfekvvsklskeke............. 105
                  Rk F++   ++r++ + ++  A+ E   +k+ + A+ +Fe++l   ++++   ++Y++  ++    n aR l++++v+ l   ++             
  KHJ30297.1  57 KRKEFEDYVRRNRINMNNWMRYAQWELE-QKEFQRARSVFERALDVDSTSITLWIRYIEAEMKTRSINHARNLLDRAVTILPRVDKlwykycymeemlg 154
                 5778888888889999999999999999.899999**********************************************99999************* PP

         Suf 106 ....akelykkfleyestfgdlssilklekRmeel 136
                     +++++++++ +e      ss +klekR+ e 
  KHJ30297.1 155 nipgTRQVFERWMAWEPDETAWSSYIKLEKRYGEF 189
                 ********************************886 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.57
         Suf 109 lykkfleyestfgdlssilk 128
                  + k++++e ++g  + + +
  KHJ30297.1 208 NWIKWAKFEEEYGTCDLVRE 227
                 499**********9887765 PP

  == domain 3  score: 16.7 bits;  conditional E-value: 6.7e-06
         Suf  71 efvlkYldyLislnddnnaRvlfekvvsklskekeakelykkfleyestfgdlssilkle 130
                    ++Y  y ++l + ++aR+++  ++ +l   k +  l k +  +e++fgd + + ++ 
  KHJ30297.1 244 RLFIAYARYESKLKEYERARAIYKYALDRLPRSK-SLALHKAYTTFEKQFGDQDGVENVV 302
                 45678*****************************.*****************99998752 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 2.5
         Suf  79 y 79 
                 y
  KHJ30297.1 370 Y 370
                 1 PP

  == domain 5  score: 17.7 bits;  conditional E-value: 3.2e-06
         Suf  83 lnddnnaRvlfekvvsklskekeakelykkfleyestfgdlssilklekRmee 135
                 l+d +++R++fe +++++  +   + l+k ++++e + g+ +   +l +R+ e
  KHJ30297.1 483 LDDLERTRAIFELAIEQPLLDM-PELLWKAYIDFEEEEGEYDRARQLYERLLE 534
                 7999*************99999.9********************999999766 PP

  == domain 6  score: 16.2 bits;  conditional E-value: 9.3e-06
         Suf  86 dnnaRvlfekvvsklskeke...akelykkfleyestfgdlssilklekRmeelfp 138
                 +++aR +f+++++++++++      +l + +l++e+t+g+ ++i k++k+m    +
  KHJ30297.1 574 KTRARNIFQRALKNMKEKELkeeRASLLNAWLSFEQTHGSEKEIEKVQKQMPRKTK 629
                 5799**********987763445789***********************9976555 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   0.00011     0.096       4      32 ..      75     103 ..      73     105 .. 0.91
   2 ?   -1.7   0.0       5.1   4.4e+03      18      32 ..     123     137 ..     115     138 .. 0.80
   3 ?    0.3   0.0       1.1   9.8e+02      15      26 ..     187     198 ..     183     205 .. 0.85
   4 ?    6.5   1.3     0.012        10       6      33 ..     248     275 ..     244     276 .. 0.84
   5 ?    2.7   0.1       0.2   1.8e+02      23      34 .]     309     320 ..     307     320 .. 0.91
   6 ?    4.2   0.0     0.068        58       3      32 ..     323     352 ..     321     353 .. 0.89
   7 ?    5.3   0.1     0.029        25      13      33 ..     377     397 ..     374     398 .. 0.90
   8 ?    0.0   0.0       1.4   1.2e+03       1      33 [.     403     435 ..     403     436 .. 0.83
   9 ?   -0.3   0.1       1.8   1.6e+03      12      32 ..     447     467 ..     445     469 .. 0.83
  10 !    8.9   0.4    0.0021       1.8      13      30 ..     518     535 ..     516     538 .. 0.89
  11 ?   -0.3   0.0       1.8   1.6e+03      19      29 ..     576     586 ..     574     590 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00011
       TPR_2   4 lynlGlayyklgdyeeAleafekAleldP 32 
                 +++ ++  ++++++++A+  fe+Al  d 
  KHJ30297.1  75 WMRYAQWELEQKEFQRARSVFERALDVDS 103
                 89999********************9875 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 5.1
       TPR_2  18 eeAleafekAleldP 32 
                 + A++++++A+ + P
  KHJ30297.1 123 NHARNLLDRAVTILP 137
                 6799******99887 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 1.1
       TPR_2  15 gdyeeAleafek 26 
                 g++++A+e f++
  KHJ30297.1 187 GEFQRAREIFQR 198
                 99******9998 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.012
       TPR_2   6 nlGlayyklgdyeeAleafekAleldPn 33 
                 + ++   kl++ye+A++ ++ Al   P+
  KHJ30297.1 248 AYARYESKLKEYERARAIYKYALDRLPR 275
                 56777789***************98875 PP

  == domain 5  score: 2.7 bits;  conditional E-value: 0.2
       TPR_2  23 afekAleldPnn 34 
                 ++e+ l+ +P+n
  KHJ30297.1 309 YYEELLKENPKN 320
                 9*********97 PP

  == domain 6  score: 4.2 bits;  conditional E-value: 0.068
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldP 32 
                 +++  +++ + +gd+++ ++ +e A++  P
  KHJ30297.1 323 IWFDSARLEETAGDPDKVRDVYENAIAQVP 352
                 78999999999***************9766 PP

  == domain 7  score: 5.3 bits;  conditional E-value: 0.029
       TPR_2  13 klgdyeeAleafekAleldPn 33 
                 +++d e+A++ + ++l+l P+
  KHJ30297.1 377 ESKDIERARQIYLECLKLIPH 397
                 6799**************996 PP

  == domain 8  score: 0.0 bits;  conditional E-value: 1.4
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPn 33 
                 a+++   +    ++ ++  A++ + +A+  +P+
  KHJ30297.1 403 AKIWLLKAHFEVRQHNLSLARKTLGQAIGMCPK 435
                 567778888888999************988887 PP

  == domain 9  score: -0.3 bits;  conditional E-value: 1.8
       TPR_2  12 yklgdyeeAleafekAleldP 32 
                 +kl ++ +++ ++ek +e + 
  KHJ30297.1 447 LKLFEFSRCRTLYEKYIEWNN 467
                 57889999*******999876 PP

  == domain 10  score: 8.9 bits;  conditional E-value: 0.0021
       TPR_2  13 klgdyeeAleafekAlel 30 
                 + g+y++A++++e+ le 
  KHJ30297.1 518 EEGEYDRARQLYERLLEK 535
                 579*************96 PP

  == domain 11  score: -0.3 bits;  conditional E-value: 1.8
       TPR_2  19 eAleafekAle 29 
                 +A++ f++Al+
  KHJ30297.1 576 RARNIFQRALK 586
                 69999****98 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0     0.002       1.7       8      27 ..      83     102 ..      58     106 .. 0.56
   2 ?    1.2   0.0      0.72   6.2e+02      11      29 ..     187     205 ..     185     209 .. 0.86
   3 ?    5.9   0.6     0.025        21       4      35 ..     250     278 ..     247     290 .. 0.74
   4 !    9.0   0.0    0.0027       2.3      19      56 ..     309     343 ..     306     353 .. 0.83
   5 ?    7.0   0.0     0.011       9.3      10      27 ..     519     536 ..     510     542 .. 0.78
   6 ?   -1.1   0.0       3.8   3.2e+03      14      26 ..     575     587 ..     574     600 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.002
      TPR_16   8 lragdyddAaaaleaalkrd 27 
                 l+++++++A+ ++e+al+ d
  KHJ30297.1  83 LEQKEFQRARSVFERALDVD 102
                 45555555555555555544 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.72
      TPR_16  11 gdyddAaaaleaalkrdps 29 
                 g++++A++ +++++  +p+
  KHJ30297.1 187 GEFQRAREIFQRFTLVHPE 205
                 789**********999944 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.025
      TPR_16   4 araalragdyddAaaaleaalkrdpssPdaae 35 
                 ar+  ++++y++A+a ++ al+r    P+   
  KHJ30297.1 250 ARYESKLKEYERARAIYKYALDRL---PRSKS 278
                 666777888999999999999988...55544 PP

  == domain 4  score: 9.0 bits;  conditional E-value: 0.0027
      TPR_16  19 aleaalkrdpssPdaaeAllllgdaalrqgrlaeAaal 56 
                 ++e++lk +   P +++ ++ ++++   +g+ ++ +++
  KHJ30297.1 309 YYEELLKEN---PKNYDIWFDSARLEETAGDPDKVRDV 343
                 47*******...******************99875555 PP

  == domain 5  score: 7.0 bits;  conditional E-value: 0.011
      TPR_16  10 agdyddAaaaleaalkrd 27 
                  g+yd+A+ ++e++l++ 
  KHJ30297.1 519 EGEYDRARQLYERLLEKT 536
                 477888888888888765 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 3.8
      TPR_16  14 ddAaaaleaalkr 26 
                 ++A++ +++alk+
  KHJ30297.1 575 TRARNIFQRALKN 587
                 589999****996 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.5   0.00067      0.57     149     205 ..      75     131 ..      58     155 .. 0.81
   2 ?    3.4   0.0     0.044        37     112     171 ..     142     198 ..     137     209 .. 0.82
   3 !    7.4   0.1    0.0027       2.3     145     182 ..     242     279 ..     205     291 .. 0.87
   4 ?    1.7   0.0      0.14   1.2e+02     148     178 ..     323     353 ..     307     377 .. 0.81
   5 ?   -1.3   0.0       1.2     1e+03     146     174 ..     403     431 ..     356     442 .. 0.47
   6 !   10.2   0.1   0.00036      0.31     111     176 ..     471     536 ..     464     541 .. 0.90
   7 ?   -0.4   0.2      0.63   5.3e+02     153     184 ..     565     595 ..     564     629 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00067
      TPR_15 149 llaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgrraeLrellka 205
                 ++++a++++++ + ++A  ++++Al+++ +s +l  +++ +   + + + +r+ll +
  KHJ30297.1  75 WMRYAQWELEQKEFQRARSVFERALDVDSTSITLWIRYIEAEMKTRSINHARNLLDR 131
                 9****************************9999988888777777777777776655 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.044
      TPR_15 112 lLssalellerakdydriaellksleeeeaaeqsaafllaraelyrqegqtdaAlrdyre 171
                 l++++ ++ e +++++ +++++++     a e +++ ++ +++l+++ g+ ++A +++++
  KHJ30297.1 142 LWYKYCYMEEMLGNIPGTRQVFER---WMAWEPDETAWSSYIKLEKRYGEFQRAREIFQR 198
                 677777777777777777777777...5578899***********************998 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.0027
      TPR_15 145 saafllaraelyrqegqtdaAlrdyreAlalapdssel 182
                 +++ ++a+a+++++  + ++A  +y+ Al++ p s++l
  KHJ30297.1 242 DERLFIAYARYESKLKEYERARAIYKYALDRLPRSKSL 279
                 678899***************************99887 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.14
      TPR_15 148 fllaraelyrqegqtdaAlrdyreAlalapd 178
                 +++  a+l++ +g++d+   +y++A+a  p 
  KHJ30297.1 323 IWFDSARLEETAGDPDKVRDVYENAIAQVPP 353
                 68889999999*************9988775 PP

  == domain 5  score: -1.3 bits;  conditional E-value: 1.2
      TPR_15 146 aafllaraelyrqegqtdaAlrdyreAla 174
                 a ++l+ a ++ ++ +   A + + +A+ 
  KHJ30297.1 403 AKIWLLKAHFEVRQHNLSLARKTLGQAIG 431
                 44555555555555555555555555555 PP

  == domain 6  score: 10.2 bits;  conditional E-value: 0.00036
      TPR_15 111 rlLssalellerakdydriaellksleeeeaaeqsaafllaraelyrqegqtdaAlrdyreAlala 176
                 + + +  el   + d++r++++++ + e++ +   ++ + a++ ++++eg+ d+A ++y++ l++ 
  KHJ30297.1 471 QAWIKFAELERGLDDLERTRAIFELAIEQPLLDMPELLWKAYIDFEEEEGEYDRARQLYERLLEKT 536
                 56667778888899**********************************************988765 PP

  == domain 7  score: -0.4 bits;  conditional E-value: 0.63
      TPR_15 153 aelyrqegqtdaAlrdyreAlalapdsselra 184
                 ae++  e+++ +A +++++Al+   + +el++
  KHJ30297.1 565 AEAKVSEAAKTRARNIFQRALKNMKE-KELKE 595
                 66777888999999999999987665.44444 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.044        37       5      32 ..      76     103 ..      73     105 .. 0.81
   2 ?    3.0   1.0      0.17   1.4e+02       8      28 ..     250     270 ..     244     272 .. 0.80
   3 ?   -0.4   0.1       2.1   1.8e+03      23      34 .]     309     320 ..     305     320 .. 0.88
   4 ?    0.1   0.0       1.4   1.2e+03       2      28 ..     322     348 ..     321     349 .. 0.90
   5 !    8.0   0.0    0.0043       3.6      13      32 ..     377     396 ..     373     398 .. 0.90
   6 ?    3.2   0.0      0.15   1.3e+02       1      34 []     403     436 ..     403     436 .. 0.93
   7 ?    1.3   0.1      0.63   5.4e+02      17      34 .]     452     469 ..     444     469 .. 0.77
   8 ?    1.3   0.0      0.62   5.3e+02       2      29 ..     471     498 ..     471     499 .. 0.93
   9 ?    2.8   0.2       0.2   1.7e+02      13      29 ..     518     534 ..     515     534 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.044
                 HHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyyekaleldp 32 
                 ++ ++  l++++++ A +++e+al+ d 
  KHJ30297.1  76 MRYAQWELEQKEFQRARSVFERALDVDS 103
                 555566678999************9986 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.17
                 HHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   8 gsiylklgdyeeAkeyyekal 28 
                 ++  +kl++ye A + y+ al
  KHJ30297.1 250 ARYESKLKEYERARAIYKYAL 270
                 666689***********9666 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 2.1
                 HHHHHHHHHHH. CS
       TPR_8  23 yyekaleldpdn 34 
                 yye+ l+ +p+n
  KHJ30297.1 309 YYEELLKENPKN 320
                 9*********96 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 1.4
                 CHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekal 28 
                 ++++  +++ ++ gd ++   +ye a+
  KHJ30297.1 322 DIWFDSARLEETAGDPDKVRDVYENAI 348
                 789999***********9999999887 PP

  == domain 5  score: 8.0 bits;  conditional E-value: 0.0043
                 HTT-HHHHHHHHHHHHHHHH CS
       TPR_8  13 klgdyeeAkeyyekaleldp 32 
                 + +d+e A + y ++l+l p
  KHJ30297.1 377 ESKDIERARQIYLECLKLIP 396
                 579***************88 PP

  == domain 6  score: 3.2 bits;  conditional E-value: 0.15
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 a++++++++    + ++  A +++ +a+ + p++
  KHJ30297.1 403 AKIWLLKAHFEVRQHNLSLARKTLGQAIGMCPKD 436
                 68999*************************9986 PP

  == domain 7  score: 1.3 bits;  conditional E-value: 0.63
                 HHHHHHHHHHHHHHHHH. CS
       TPR_8  17 yeeAkeyyekaleldpdn 34 
                 +      yek++e++ +n
  KHJ30297.1 452 FSRCRTLYEKYIEWNNAN 469
                 5667788*******9875 PP

  == domain 8  score: 1.3 bits;  conditional E-value: 0.62
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekale 29 
                 +a+ + + + + l d+e   + +e a+e
  KHJ30297.1 471 QAWIKFAELERGLDDLERTRAIFELAIE 498
                 58999999******************97 PP

  == domain 9  score: 2.8 bits;  conditional E-value: 0.2
                 HTT-HHHHHHHHHHHHH CS
       TPR_8  13 klgdyeeAkeyyekale 29 
                 + g+y+ A + ye+ le
  KHJ30297.1 518 EEGEYDRARQLYERLLE 534
                 679**********9986 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       3.9   3.3e+03       2      18 ..      95     111 ..      94     118 .. 0.85
   2 ?    0.3   0.1       1.4   1.2e+03      18      34 .]     248     264 ..     244     264 .. 0.87
   3 !   15.9   0.0   1.5e-05     0.013       1      31 [.     309     339 ..     309     342 .. 0.94
   4 ?   -0.9   0.0       3.3   2.8e+03       2      33 ..     388     423 ..     387     424 .. 0.66
   5 ?    6.6   0.1     0.014        12       1      31 [.     458     488 ..     458     493 .. 0.89
   6 ?   -2.2   0.0       8.7   7.4e+03      25      34 .]     518     527 ..     508     527 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 3.9
      TPR_17   2 ylkaleldPnnadaynn 18 
                 +++al+ d ++  ++  
  KHJ30297.1  95 FERALDVDSTSITLWIR 111
                 89*******99998865 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 1.4
      TPR_17  18 nLAelllknGdlmtArq 34 
                  +A++ +k++++++Ar+
  KHJ30297.1 248 AYARYESKLKEYERARA 264
                 699999*********95 PP

  == domain 3  score: 15.9 bits;  conditional E-value: 1.5e-05
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmt 31 
                 +y++ l+ +P+n d ++  A+l + +Gd+++
  KHJ30297.1 309 YYEELLKENPKNYDIWFDSARLEETAGDPDK 339
                 6***************************986 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 3.3
      TPR_17   2 ylkalel..dPnn..adaynnLAelllknGdlmtAr 33 
                 yl++l+l  +++   a+ + ++A +  ++++l  Ar
  KHJ30297.1 388 YLECLKLipHKKFtfAKIWLLKAHFEVRQHNLSLAR 423
                 777777744333366888888888887777776666 PP

  == domain 5  score: 6.6 bits;  conditional E-value: 0.014
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmt 31 
                 ly+k +e +  n  a+   Ael + + dl++
  KHJ30297.1 458 LYEKYIEWNNANCQAWIKFAELERGLDDLER 488
                 7*********************998888775 PP

  == domain 6  score: -2.2 bits;  conditional E-value: 8.7
      TPR_17  25 knGdlmtArq 34 
                 + G++++Arq
  KHJ30297.1 518 EEGEYDRARQ 527
                 6699****98 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.053        45       4      28 ..      76     100 ..      74     105 .. 0.88
   2 ?    7.0   0.0     0.012        10      10      31 ..     179     204 ..     175     205 .. 0.77
   3 ?    4.8   0.6      0.06        52       7      33 .]     248     276 ..     245     276 .. 0.78
   4 ?    0.4   0.1       1.5   1.3e+03      22      32 ..     309     319 ..     306     320 .. 0.87
   5 ?   -0.1   0.0       2.2   1.9e+03       7      31 ..     328     352 ..     323     353 .. 0.81
   6 ?   -0.6   0.0       3.1   2.6e+03      14      27 ..     379     392 ..     369     394 .. 0.78
   7 ?   -0.8   0.0       3.7   3.1e+03       7      28 ..     477     498 ..     471     500 .. 0.76
   8 !   10.5   0.2   0.00093      0.79      12      29 ..     518     535 ..     507     535 .. 0.77
   9 ?    1.4   0.2      0.71     6e+02      15      29 ..     573     587 ..     565     587 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.053
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   4 yklalsyrklgdtdkAlealerlik 28 
                 ++ a+  +++++ ++A+  +er ++
  KHJ30297.1  76 MRYAQWELEQKEFQRARSVFERALD 100
                 5789999999************986 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.012
                 HHHH....HHHHHHHHHHHHHHHH-T CS
       TPR_6  10 yrkl....gdtdkAlealerlikeYP 31 
                 y+kl    g+ ++A+e+++r+   +P
  KHJ30297.1 179 YIKLekryGEFQRAREIFQRFTLVHP 204
                 555445669***********986666 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.06
                 HHHHHH..HHHHHHHHHHHHHHHHH-TT- CS
       TPR_6   7 alsyrk..lgdtdkAlealerlikeYPdS 33 
                 a+++++  l+++++A+++++  +++ P S
  KHJ30297.1 248 AYARYEskLKEYERARAIYKYALDRLPRS 276
                 5555532369**********999998877 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 1.5
                 HHHHHHHH-TT CS
       TPR_6  22 alerlikeYPd 32 
                 ++e+l+ke P+
  KHJ30297.1 309 YYEELLKENPK 319
                 9*********8 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 2.2
                 HHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   7 alsyrklgdtdkAlealerlikeYP 31 
                 a++ + +gd+dk ++ +e+ i + P
  KHJ30297.1 328 ARLEETAGDPDKVRDVYENAIAQVP 352
                 66666689**********9998765 PP

  == domain 6  score: -0.6 bits;  conditional E-value: 3.1
                 HHHHHHHHHHHHHH CS
       TPR_6  14 gdtdkAlealerli 27 
                 +d ++A++++ +++
  KHJ30297.1 379 KDIERARQIYLECL 392
                 699*****997776 PP

  == domain 7  score: -0.8 bits;  conditional E-value: 3.7
                 HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAlealerlik 28 
                 a++ r l+d ++ ++++e  i+
  KHJ30297.1 477 AELERGLDDLERTRAIFELAIE 498
                 5556667999*******98887 PP

  == domain 8  score: 10.5 bits;  conditional E-value: 0.00093
                 HHHHHHHHHHHHHHHHHH CS
       TPR_6  12 klgdtdkAlealerlike 29 
                 + g++d+A++++erl+++
  KHJ30297.1 518 EEGEYDRARQLYERLLEK 535
                 259************986 PP

  == domain 9  score: 1.4 bits;  conditional E-value: 0.71
                 HHHHHHHHHHHHHHH CS
       TPR_6  15 dtdkAlealerlike 29 
                  +++A+ +++r +k+
  KHJ30297.1 573 AKTRARNIFQRALKN 587
                 5689*******9986 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0     0.013        11      24      80 ..      73     130 ..      61     132 .. 0.82
   2 ?   -1.5   0.0       3.5     3e+03      37      64 ..     187     214 ..     183     232 .. 0.80
   3 ?    2.4   0.2      0.21   1.8e+02      29      65 ..     249     286 ..     236     293 .. 0.75
   4 ?   -1.2   0.1       2.8   2.4e+03      36      80 ..     378     427 ..     375     429 .. 0.70
   5 ?    3.0   0.0      0.14   1.2e+02      36      65 ..     519     548 ..     505     559 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.013
                 HHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3  24 edayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                 ++ + +A+  +++++++rA  ++++a + +s+s+  ++ + ++  k  +++ A+++L+
  KHJ30297.1  73 NNWMRYAQWELEQKEFQRARSVFERAlDVDSTSITLWIRYIEAEMKTRSINHARNLLD 130
                 5566699999****************99999999888888888888888888888776 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 3.5
                 T-HHHHHHHHHCTSHHHC-HHHHHHHHH CS
      ANAPC3  37 gqykrAyellrkaklnskslgcrylfAq 64 
                 g+++rA e+++++ l +  ++ ++ +A+
  KHJ30297.1 187 GEFQRAREIFQRFTLVHPEPRNWIKWAK 214
                 899********99888877777777766 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.21
                 HHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHH CS
      ANAPC3  29 lAlclylngqykrAyellrka.klnskslgcrylfAqc 65 
                 +A    ++++y+rA  +++ a +  ++s+  ++ +A +
  KHJ30297.1 249 YARYESKLKEYERARAIYKYAlDRLPRSKSLALHKAYT 286
                 55555677889999999999988888888777777755 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 2.8
                 TT-HHHHHHHHHCT.SHHHC-H....HHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3  36 ngqykrAyellrka.klnsksl....gcrylfAqcllkLkkyeeAiaaLe 80 
                 +++ +rA +++ ++ kl ++ +    ++++l+A+  + ++++  A+++L+
  KHJ30297.1 378 SKDIERARQIYLEClKLIPHKKftfaKIWLLKAHFEVRQHNLSLARKTLG 427
                 67778888888888666666657777778888887777777777777776 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.14
                 TT-HHHHHHHHHCTSHHHC-HHHHHHHHHH CS
      ANAPC3  36 ngqykrAyellrkaklnskslgcrylfAqc 65 
                  g+y+rA +l++++ ++  + ++++ fA+ 
  KHJ30297.1 519 EGEYDRARQLYERLLEKTDHVKVWISFAHF 548
                 578***********9999999999999975 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.038        32      12      31 ..      85     102 ..      81     107 .. 0.81
   2 ?   -1.3   0.1       3.5     3e+03      13      24 ..     187     198 ..     186     200 .. 0.94
   3 ?    3.4   0.2      0.11        94      11      29 ..     255     274 ..     246     290 .. 0.79
   4 ?   -1.3   0.0       3.5     3e+03      12      29 ..     334     349 ..     328     355 .. 0.81
   5 !   10.2   0.3   0.00073      0.63      11      29 ..     518     536 ..     515     541 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.038
       TPR_7  12 lGdyeeAielyeqsLaltkd 31 
                 + ++++A +++e+  al+ d
  KHJ30297.1  85 QKEFQRARSVFER--ALDVD 102
                 569**********..77766 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 3.5
       TPR_7  13 GdyeeAielyeq 24 
                 G++++A e++++
  KHJ30297.1 187 GEFQRAREIFQR 198
                 89*******998 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.11
       TPR_7  11 rlGdyeeAielyeqsL.alt 29 
                 +l +ye+A  +y+ +L +l 
  KHJ30297.1 255 KLKEYERARAIYKYALdRLP 274
                 4889**********554443 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 3.5
       TPR_7  12 lGdyeeAielyeqsLalt 29 
                  Gd ++  ++ye   a++
  KHJ30297.1 334 AGDPDKVRDVYEN--AIA 349
                 5999999999999..554 PP

  == domain 5  score: 10.2 bits;  conditional E-value: 0.00073
       TPR_7  11 rlGdyeeAielyeqsLalt 29 
                 ++G+y++A +lye++L+ t
  KHJ30297.1 518 EEGEYDRARQLYERLLEKT 536
                 68************66543 PP

>> EVC2_like  Ellis van Creveld protein 2 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   6.4   2.3e-05     0.019     186     288 ..     566     666 ..     561     670 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.3e-05
   EVC2_like 186 sgelsrqvekrlssvfkkqllal.ekelkeeyerkmvaLaaecnletrekleaehkkeeaekeeaeellkkasekellelssLLdklhkleqeeLqrlL 283
                 + ++s+ ++ r +++f+++l+++ ekelkee+    + L a+++ e+    e e  k + ++ +++++ +k+++ +  e+++      + ++e+L+++L
  KHJ30297.1 566 EAKVSEAAKTRARNIFQRALKNMkEKELKEER---ASLLNAWLSFEQTHGSEKEIEKVQKQMPRKTKRRRKIDDDSYEEYVDYVFPADDRQAEKLSNFL 661
                 56789999***************445677765...6899************************************************************ PP

   EVC2_like 284 llkqe 288
                 +l q 
  KHJ30297.1 662 ALAQS 666
                 **985 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1     0.036        31       4      57 ..      81     134 ..      79     141 .. 0.79
   2 ?    1.8   0.0       0.3   2.6e+02      41      62 ..     185     206 ..     156     209 .. 0.79
   3 ?    3.0   0.0      0.14   1.2e+02      17      60 ..     309     352 ..     304     364 .. 0.85
   4 ?    0.1   0.0       1.1   9.5e+02      10      62 ..     380     436 ..     376     438 .. 0.69
   5 ?   -2.7   0.0       8.2     7e+03       8      22 ..     519     533 ..     517     535 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.036
       TPR_9   4 iaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeayla 57 
                 + +++++++ra  v er l +++ ++ ++     ++++   ++ A++ L++++ 
  KHJ30297.1  81 WELEQKEFQRARSVFERALDVDSTSITLWIRYIEAEMKTRSINHARNLLDRAVT 134
                 5578999********************998777777777777777777776665 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.3
       TPR_9  41 qlGclsaAladLeaylalapda 62 
                 + G ++ A++ ++++  + p++
  KHJ30297.1 185 RYGEFQRAREIFQRFTLVHPEP 206
                 6788999999999998888765 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.14
       TPR_9  17 vverllllaPddpeerrdRGlllaqlGclsaAladLeaylalap 60 
                 ++e ll  +P+  + ++d ++l++  G++ + ++  e ++a+ p
  KHJ30297.1 309 YYEELLKENPKNYDIWFDSARLEETAGDPDKVRDVYENAIAQVP 352
                 678888999*******************9998888888888776 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 1.1
       TPR_9  10 dweralavverllllaPdd....peerrdRGlllaqlGclsaAladLeaylalapda 62 
                 d era +++   l l P+     +  ++  +  ++++ +ls A++ L +++ ++p++
  KHJ30297.1 380 DIERARQIYLECLKLIPHKkftfAKIWLLKAHFEVRQHNLSLARKTLGQAIGMCPKD 436
                 555665555555555444333335667777888899999999999999999999976 PP

  == domain 5  score: -2.7 bits;  conditional E-value: 8.2
       TPR_9   8 eedweralavverll 22 
                 e +++ra + +erll
  KHJ30297.1 519 EGEYDRARQLYERLL 533
                 667888999999987 PP

>> U3_assoc_6  U3 small nucleolar RNA-associated protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.1   0.00019      0.16      27      63 ..      56      92 ..      46      94 .. 0.89
   2 ?    7.4   0.1    0.0054       4.6      21      62 ..      84     125 ..      83     128 .. 0.86
   3 ?    3.4   0.4     0.096        82      45      64 ..     245     264 ..     239     284 .. 0.85
   4 ?    1.9   0.1      0.28   2.4e+02      44      69 ..     437     462 ..     431     469 .. 0.79
   5 ?    4.1   0.1     0.058        49      27      63 ..     454     490 ..     449     494 .. 0.91
   6 ?   -2.8   0.0       8.2     7e+03      34      56 ..     530     552 ..     523     553 .. 0.74
   7 ?   -2.6   0.4       6.9   5.9e+03      34      52 ..     626     645 ..     613     647 .. 0.50

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00019
  U3_assoc_6 27 kkrrkfEyklqrrgkkkedflkYieyElnLeklrkkR 63
                +kr++fE  + r + + +++++Y+++El+ ++  + R
  KHJ30297.1 56 RKRKEFEDYVRRNRINMNNWMRYAQWELEQKEFQRAR 92
                79*************************9977776666 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0054
  U3_assoc_6  21 EikeIvkkrrkfEyklqrrgkkkedflkYieyElnLeklrkk 62 
                 E ke  + r+ fE +l   + ++  +++Yie E++   + + 
  KHJ30297.1  84 EQKEFQRARSVFERALDVDSTSITLWIRYIEAEMKTRSINHA 125
                 55777889**************************98776655 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.096
  U3_assoc_6  45 dflkYieyElnLeklrkkRr 64 
                  f++Y++yE +L++  + R 
  KHJ30297.1 245 LFIAYARYESKLKEYERARA 264
                 59**********99988885 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.28
  U3_assoc_6  44 edflkYieyElnLeklrkkRrkrlkl 69 
                 + f  Yie El+L +  + R    k+
  KHJ30297.1 437 KLFKGYIELELKLFEFSRCRTLYEKY 462
                 56899********9999998766655 PP

  == domain 5  score: 4.1 bits;  conditional E-value: 0.058
  U3_assoc_6  27 kkrrkfEyklqrrgkkkedflkYieyElnLeklrkkR 63 
                 + r+ +E  ++  +++ + ++k++e E  L++l + R
  KHJ30297.1 454 RCRTLYEKYIEWNNANCQAWIKFAELERGLDDLERTR 490
                 568999999************************9988 PP

  == domain 6  score: -2.8 bits;  conditional E-value: 8.2
  U3_assoc_6  34 yklqrrgkkkedflkYieyElnL 56 
                  +l  ++ + + +++++++E+n+
  KHJ30297.1 530 ERLLEKTDHVKVWISFAHFEINI 552
                 46667788888899999999986 PP

  == domain 7  score: -2.6 bits;  conditional E-value: 6.9
  U3_assoc_6  34 yklqrrgk.kkedflkYiey 52 
                  k +rr+k   +++ +Y++y
  KHJ30297.1 626 RKTKRRRKiDDDSYEEYVDY 645
                 34444444355556666666 PP

>> QIL1  MICOS complex subunit MIC13, QIL1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0         2   1.7e+03      15      38 ..     127     150 ..     120     166 .. 0.70
   2 ?    8.6   0.0    0.0032       2.8       8      35 ..     335     364 ..     335     380 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 2
        QIL1  15 elykkakeyipPyvde.vkkklcle 38 
                  l+ +a  +i P vd+ + k++  e
  KHJ30297.1 127 NLLDRAV-TILPRVDKlWYKYCYME 150
                 5566666.78889998888888555 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0032
        QIL1   8 gsseeteelykkakeyipPyvde..vkkkl 35 
                 g+++++ ++y++a +++pP++++  +++++
  KHJ30297.1 335 GDPDKVRDVYENAIAQVPPTLEKrhWRRYI 364
                 7899******************54799888 PP

>> Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.8   2.4e+03      14      31 ..      85     102 ..      83     103 .. 0.88
   2 ?    1.9   0.0      0.29   2.4e+02      13      33 ..     185     205 ..     183     209 .. 0.86
   3 ?    4.8   0.8     0.035        30       7      30 ..     247     272 ..     245     283 .. 0.77
   4 ?   -1.9   0.0       4.2   3.6e+03      21      35 ..     307     321 ..     304     323 .. 0.84
   5 ?   -0.1   0.1       1.2     1e+03      12      37 ..     447     472 ..     446     473 .. 0.89
   6 ?    6.6   0.1    0.0096       8.2      15      30 ..     520     535 ..     519     538 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2.8
                 HT-HHHHHHHHHHHHHHT CS
  Fis1_TPR_C  14 lgeYseArryvdalLeiE 31 
                 ++e+++Ar   ++ L ++
  KHJ30297.1  85 QKEFQRARSVFERALDVD 102
                 689*********999875 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.29
                 HHT-HHHHHHHHHHHHHHTTS CS
  Fis1_TPR_C  13 klgeYseArryvdalLeiEPe 33 
                 + ge+++Ar+  +++  ++Pe
  KHJ30297.1 185 RYGEFQRAREIFQRFTLVHPE 205
                 789**********99888887 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.035
                 HHHHHH..HHT-HHHHHHHHHHHHHH CS
  Fis1_TPR_C   7 lAlGhy..klgeYseArryvdalLei 30 
                 +A++ y  kl+eY++Ar   +  L  
  KHJ30297.1 247 IAYARYesKLKEYERARAIYKYALDR 272
                 556655559********998877765 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 4.2
                 HHHHHHHHHHTTS-H CS
  Fis1_TPR_C  21 rryvdalLeiEPenr 35 
                 r y + lL+  P+n 
  KHJ30297.1 307 RVYYEELLKENPKNY 321
                 558999******995 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 1.2
                 HHHT-HHHHHHHHHHHHHHTTS-HHH CS
  Fis1_TPR_C  12 yklgeYseArryvdalLeiEPenrQa 37 
                 +kl e+s++r + +  +e    n Qa
  KHJ30297.1 447 LKLFEFSRCRTLYEKYIEWNNANCQA 472
                 69**********99999998888887 PP

  == domain 6  score: 6.6 bits;  conditional E-value: 0.0096
                 T-HHHHHHHHHHHHHH CS
  Fis1_TPR_C  15 geYseArryvdalLei 30 
                 geY++Ar++ ++lLe+
  KHJ30297.1 520 GEYDRARQLYERLLEK 535
                 8*************97 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.027        23      13      33 ..      84     104 ..      83     105 .. 0.90
   2 ?    3.9   0.2     0.062        53      13      32 ..     255     274 ..     253     276 .. 0.90
   3 ?   -0.8   0.2       1.9   1.6e+03      23      34 .]     309     320 ..     308     320 .. 0.92
   4 ?   -0.8   0.0       1.9   1.6e+03      14      29 ..     334     349 ..     322     352 .. 0.84
   5 ?    1.1   0.1      0.46   3.9e+02      15      33 ..     379     397 ..     376     398 .. 0.89
   6 ?   -1.0   0.0       2.2   1.9e+03       1      34 []     403     436 ..     403     436 .. 0.87
   7 ?    3.2   0.5       0.1        85      14      29 ..     519     534 ..     517     535 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.027
                 HTT-HHHHHHHHHHHHHHSTT CS
       TPR_1  13 klgkydeAleyyekALelnPn 33 
                 ++++++ A   +e+AL ++ +
  KHJ30297.1  84 EQKEFQRARSVFERALDVDST 104
                 69***************9975 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.062
                 HTT-HHHHHHHHHHHHHHST CS
       TPR_1  13 klgkydeAleyyekALelnP 32 
                 kl++y+ A + y+ AL   P
  KHJ30297.1 255 KLKEYERARAIYKYALDRLP 274
                 89**************9877 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.9
                 HHHHHHHHSTTH CS
       TPR_1  23 yyekALelnPnn 34 
                 yye+ L+ nP+n
  KHJ30297.1 309 YYEELLKENPKN 320
                 9*********98 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 1.9
                 TT-HHHHHHHHHHHHH CS
       TPR_1  14 lgkydeAleyyekALe 29 
                  g++d+  + ye A+ 
  KHJ30297.1 334 AGDPDKVRDVYENAIA 349
                 6999999999***996 PP

  == domain 5  score: 1.1 bits;  conditional E-value: 0.46
                 T-HHHHHHHHHHHHHHSTT CS
       TPR_1  15 gkydeAleyyekALelnPn 33 
                 ++ + A + y ++L+l P+
  KHJ30297.1 379 KDIERARQIYLECLKLIPH 397
                 8999************996 PP

  == domain 6  score: -1.0 bits;  conditional E-value: 2.2
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnPnn 34 
                 ak++  +++   ++ ++  A +   +A+  +P++
  KHJ30297.1 403 AKIWLLKAHFEVRQHNLSLARKTLGQAIGMCPKD 436
                 7889999999999999999999999999999875 PP

  == domain 7  score: 3.2 bits;  conditional E-value: 0.1
                 TT-HHHHHHHHHHHHH CS
       TPR_1  14 lgkydeAleyyekALe 29 
                  g+yd A + ye+ Le
  KHJ30297.1 519 EGEYDRARQLYERLLE 534
                 69**********9776 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       9.9   8.4e+03      64      75 ..      22      33 ..      21      34 .. 0.77
   2 ?    7.2   0.0    0.0073       6.3       9      74 ..      78     101 ..      71     106 .. 0.61
   3 ?   -1.7   0.1       4.4   3.7e+03      58      70 ..     186     198 ..     182     199 .. 0.69
   4 ?    5.1   0.2     0.032        27      47      75 ..     245     273 ..     226     275 .. 0.83
   5 ?    2.2   0.0      0.27   2.3e+02      14      74 ..     332     394 ..     322     396 .. 0.68
   6 ?   -0.1   0.0       1.3   1.1e+03       3      30 ..     403     430 ..     401     435 .. 0.84
   7 ?   -1.4   0.1       3.4   2.9e+03       5      31 ..     472     498 ..     468     499 .. 0.81
   8 ?    5.2   0.2      0.03        25      13      31 ..     516     534 ..     506     537 .. 0.70
   9 ?    0.3   0.0         1   8.7e+02      22      76 ..     577     589 ..     574     612 .. 0.62

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 9.9
      TPR_12 64 Alelleealaia 75
                A++ll+ea+++ 
  KHJ30297.1 22 AEQLLREAVDRQ 33
                899999998865 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0073
      TPR_12   9 laavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74 
                 +                                          +++ +++++++ A++ +e+al++
  KHJ30297.1  78 Y------------------------------------------AQWELEQKEFQRARSVFERALDV 101
                 4..........................................55555666666666666666654 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 4.4
      TPR_12  58 lgryeeAlellee 70 
                  g+++ A+e++++
  KHJ30297.1 186 YGEFQRAREIFQR 198
                 5777777777775 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.032
      TPR_12  47 tlrnLgrlyralgryeeAlelleealaia 75 
                   ++++r+ ++l++ye A+++++ al+++
  KHJ30297.1 245 LFIAYARYESKLKEYERARAIYKYALDRL 273
                 6678999999999********99999876 PP

  == domain 5  score: 2.2 bits;  conditional E-value: 0.27
      TPR_12  14 rrlgrydeAlellekaleiarrllGpdh.pltattlrnLgrly.ralgryeeAlelleealai 74 
                   +g+ d+ ++ +e a++++  +l++ h   ++   + ++++  +++++ e A++++ e+l++
  KHJ30297.1 332 ETAGDPDKVRDVYENAIAQVPPTLEKRHwRRYIYLWIFYAIWEeLESKDIERARQIYLECLKL 394
                 556666666666666666666665555556667777777777536888889999999888876 PP

  == domain 6  score: -0.1 bits;  conditional E-value: 1.3
      TPR_12   3 atalnnlaavlrrlgrydeAlellekal 30 
                 a+++   a+++ r+ ++  A++ l +a+
  KHJ30297.1 403 AKIWLLKAHFEVRQHNLSLARKTLGQAI 430
                 6788889999999999999999998886 PP

  == domain 7  score: -1.4 bits;  conditional E-value: 3.4
      TPR_12   5 alnnlaavlrrlgrydeAlellekale 31 
                 a+ + a+++r l +++  ++++e a+e
  KHJ30297.1 472 AWIKFAELERGLDDLERTRAIFELAIE 498
                 677789999999999999999998877 PP

  == domain 8  score: 5.2 bits;  conditional E-value: 0.03
      TPR_12  13 lrrlgrydeAlellekale 31 
                 + + g+yd A++l+e+ le
  KHJ30297.1 516 EEEEGEYDRARQLYERLLE 534
                 5566777777777777765 PP

  == domain 9  score: 0.3 bits;  conditional E-value: 1
      TPR_12  22 AlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaiae 76 
                 A+ ++++al  +                                          +
  KHJ30297.1 577 ARNIFQRALKNM------------------------------------------K 589
                 455555555555..........................................3 PP

>> PBP1_TM  Transmembrane domain of transglycosylase PBP1 at N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.3      0.16   1.4e+02      40      62 ..     554     576 ..     547     601 .. 0.62
   2 ?    7.4   1.5    0.0067       5.7      17      45 ..     621     651 ..     612     662 .. 0.57

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.16
     PBP1_TM  40 ddeedDdddddeeeevprkgkkk 62 
                 d++++D d+++ e +v+  +k++
  KHJ30297.1 554 DEDYEDIDEEEAEAKVSEAAKTR 576
                 34455555555555554443332 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0067
     PBP1_TM  17 kakparkkasrrrrrdddydd..eyddeedD 45 
                 +++ +rk+++rr+  dd y++  +y    dD
  KHJ30297.1 621 QKQMPRKTKRRRKIDDDSYEEyvDYVFPADD 651
                 4455666666655667778883332222233 PP

>> Mad3_BUB1_I  Mad3/BUB1 homology region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   1.3      0.08        69     100     123 ..      75      98 ..      56     165 .. 0.75
   2 ?   -1.9   0.1       3.7   3.1e+03     101     121 ..     177     197 ..     174     198 .. 0.66
   3 ?    3.6   0.2     0.074        63      98     123 ..     244     269 ..     207     270 .. 0.89
   4 ?    0.1   0.1      0.89   7.6e+02      42      75 ..     339     372 ..     314     393 .. 0.71
   5 ?    8.4   0.1    0.0023         2      68     122 ..     471     531 ..     453     533 .. 0.92
   6 ?   -3.1   0.0       8.6   7.4e+03      66      77 ..     538     549 ..     536     571 .. 0.72
   7 ?    0.7   0.1      0.58   4.9e+02      38      82 ..     572     616 ..     557     628 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.08
                  HHHHHHHHHHTT-HHHHHHHHHHH CS
  Mad3_BUB1_I 100 YeewAellekkgrfkeAeevyelG 123
                  + ++A++  ++++f++A++v+e++
   KHJ30297.1  75 WMRYAQWELEQKEFQRARSVFERA 98 
                  445566666666666666666554 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 3.7
                  HHHHHHHHHTT-HHHHHHHHH CS
  Mad3_BUB1_I 101 eewAellekkgrfkeAeevye 121
                   ++ +l ++ g+f++A+e+++
   KHJ30297.1 177 SSYIKLEKRYGEFQRAREIFQ 197
                  445555566778888999987 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.074
                  HHHHHHHHHHHHTT-HHHHHHHHHHH CS
  Mad3_BUB1_I  98 lfYeewAellekkgrfkeAeevyelG 123
                   +++++A++  k +++++A+++y+ +
   KHJ30297.1 244 RLFIAYARYESKLKEYERARAIYKYA 269
                  5899*******************976 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.89
                  -HHHHHHHHHHHTTTSGGGTT-HHHHHHHHHHHT CS
  Mad3_BUB1_I  42 gllellerclkkfkdderYknDpRylklwlkyad 75 
                  ++ +++e+++ ++    + ++  Ry+ lw+ ya 
   KHJ30297.1 339 KVRDVYENAIAQVPPTLEKRHWRRYIYLWIFYAI 372
                  5566666666666666666666788888888874 PP

  == domain 5  score: 8.4 bits;  conditional E-value: 0.0023
                  HHHHHHHTTS......S-HHHHHHHHHHHTTSTTBHHHHHHHHHHHHHTT-HHHHHHHHHH CS
  Mad3_BUB1_I  68 klwlkyadlv......eepreifkflaskkiGtklalfYeewAellekkgrfkeAeevyel 122
                  + w+k+a+l       e+ r if+  +++    +  l+++++  + e++g++++A+++ye+
   KHJ30297.1 471 QAWIKFAELErglddlERTRAIFELAIEQPLLDMPELLWKAYIDFEEEEGEYDRARQLYER 531
                  689999999889998899****************************************985 PP

  == domain 6  score: -3.1 bits;  conditional E-value: 8.6
                  HHHHHHHHHTTS CS
  Mad3_BUB1_I  66 ylklwlkyadlv 77 
                  ++k+w+ +a++ 
   KHJ30297.1 538 HVKVWISFAHFE 549
                  689999998864 PP

  == domain 7  score: 0.7 bits;  conditional E-value: 0.58
                  T.TT-HHHHHHHHHHHTTTSGGGTT-HHHHHHHHHHHTTSS-HHH CS
  Mad3_BUB1_I  38 skesgllellerclkkfkdderYknDpRylklwlkyadlveepre 82 
                  + + +  ++++r+lk++k++e  ++    l+ wl + ++  +++e
   KHJ30297.1 572 AAKTRARNIFQRALKNMKEKELKEERASLLNAWLSFEQTHGSEKE 616
                  556777889999999999999999999999999998887755444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (674 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1565  (0.0872888); expected 358.6 (0.02)
Passed bias filter:                      647  (0.0360868); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.77u 0.25s 00:00:01.02 Elapsed: 00:00:00.45
# Mc/sec: 4524.49
//
Query:       KHJ30298.1  [L=850]
Description: hypothetical protein EV44_g2344 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (850 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1265  (0.0705561); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 5575.27
//
Query:       KHJ30299.1  [L=239]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1750.02
//
Query:       KHJ30300.1  [L=124]
Description: hypothetical protein EV44_g3051 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.12   12.2   0.0       0.18   11.7   0.0    1.3  1  MAPKK1_Int  Mitogen-activated protein kinase kinase 1 interac


Domain annotation for each model (and alignments):
>> MAPKK1_Int  Mitogen-activated protein kinase kinase 1 interacting
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   9.8e-06      0.18      13      51 ..      45      85 ..      36      96 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 9.8e-06
  MAPKK1_Int 13 evdgllaiivtDrDGvvllkvgddss..adsalrpslistf 51
                +++g  +ii +Dr G +++kv d++s   ds ++p +  + 
  KHJ30300.1 45 SFAGDGVIITSDRNGRIIAKVEDEESvlLDSHFKPLMARAR 85
                566667899**************999778999998877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 983.89
//
Query:       KHJ30301.1  [L=256]
Description: hypothetical protein EV44_g3340 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.3e-38  129.9   0.0    1.1e-37  129.7   0.0    1.0  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
       0.19   11.8   0.0       0.63   10.1   0.0    1.8  2  OCIA      Ovarian carcinoma immunoreactive antigen (OCIA)


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.7   0.0   1.2e-41   1.1e-37       2     222 .]      20     253 ..      19     253 .. 0.95

  Alignments for each domain:
  == domain 1  score: 129.7 bits;  conditional E-value: 1.2e-41
                 E-TT.......S-EEE......-THHHHCTB--...........-------HHHH................HCCHTS--EEEEEEBCCGCCCSBB-GGG CS
       RVT_1   2 pKkg......pgsyRpisllsvdykalnkliakrLkdvl..ekllsenqpgfrpgrstldav...edllkalkkkkkaklllklDlkkaFdsvpleell 89 
                 pK++      p s+Rpi ll++++k l++liakr ++++  + +ls++q+g  p+rs  d v    + ++ +++++k   ll+lD+k+aFd+v    l 
  KHJ30301.1  20 PKPNkrdlnsPRSWRPIILLPCLGKGLERLIAKRVSQAAvrQGVLSTQQFGALPKRSATDLVsclVHDVERARSHGKLASLLTLDIKGAFDTVFSGCLK 118
                 66666679999*****99********************999*******************99**988888889************************** PP

                 GGGG-EEET.........................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHH......HHH CS
       RVT_1  90 rkltafkvptklinliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskee......lqe 182
                 r+l++ + p +li ++ksf+s+rs+ +r+  + +++ +  +glpqGs++ P+lf l+++++lr  ++r        YaDDi il ++++       + +
  KHJ30301.1 119 RRLHEQRWPNWLIMWVKSFMSNRSIKIRLGDTVTEETALHCGLPQGSPVLPILFMLYIEPILRVGKQR----GNFIYADDIAILRTGRSLtectekITH 213
                 *****************************88877*********************************7....7889********999888889999999 PP

                 HHHHHHHHHHHTT--BEGGG-EEE.....ESSEEETTEEE CS
       RVT_1 183 lleaveewlkesglkinpeKtklvlftvkseevkyLGvtl 222
                  le +  w +e+ l++ peKt+l +ft+ +++ +y G+t+
  KHJ30301.1 214 NLERLLPWGQENALSFDPEKTELQHFTQAPRPKEYPGITF 253
                 ***************************9999999999986 PP

>> OCIA  Ovarian carcinoma immunoreactive antigen (OCIA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0     7e-05      0.63      31      60 ..      50      78 ..      48      88 .. 0.81
   2 ?   -3.0   0.0      0.89     8e+03      35      51 ..     107     123 ..     101     138 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 7e-05
        OCIA 31 vsmlvtyllvkkgvLkasprfgslpKvala 60
                ++  v++++v++gvL++ ++fg+lpK   +
  KHJ30301.1 50 IAKRVSQAAVRQGVLST-QQFGALPKRSAT 78
                566799*********97.58******7655 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.89
        OCIA  35 vtyllvkkgvLkasprf 51 
                 +++ +v +g+Lk++ + 
  KHJ30301.1 107 GAFDTVFSGCLKRRLHE 123
                 56677888888876554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       340  (0.0189637); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1805.25
//
Query:       KHJ30302.1  [L=357]
Description: putative g-patch domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-21   76.2   4.1    3.8e-21   74.6   4.1    1.9  1  DUF4187    Domain of unknown function (DUF4187)
    4.3e-10   39.3   0.8      8e-10   38.5   0.8    1.5  1  G-patch    G-patch domain
     0.0045   17.0   0.9     0.0045   17.0   0.9    2.7  2  G-patch_2  G-patch domain


Domain annotation for each model (and alignments):
>> DUF4187  Domain of unknown function (DUF4187)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.6   4.1   6.4e-25   3.8e-21       2      54 .]     306     356 ..     305     356 .. 0.98

  Alignments for each domain:
  == domain 1  score: 74.6 bits;  conditional E-value: 6.4e-25
     DUF4187   2 eleefeeleaeerLeklleyLReeylYCfwCgtkYedeedLeenCPGlteedH 54 
                 el+ef++le++erL+kl+++LR+e++YCfwC+++Y ++e+  ++CPG+te+dH
  KHJ30302.1 306 ELNEFNALEPSERLQKLVTHLRTEHYYCFWCKYSYCNQEM--DGCPGPTEKDH 356
                 899*************************************..*********** PP

>> G-patch  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.8   1.3e-13     8e-10       2      44 ..      90     134 ..      89     135 .. 0.92

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 1.3e-13
     G-patch   2 sniGvkmLqkmGWkpGqGLG..kkeqGiaePieakikkdraGlGa 44 
                 +n+G  m+ kmG+kpG+ LG   +   + eP++ +ik+dr+G+G+
  KHJ30302.1  90 DNKGLAMMTKMGFKPGAALGrpDNLGARLEPVKIQIKEDRGGIGM 134
                 79******************9777778****************97 PP

>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.9   7.5e-07    0.0045      18      59 ..      93     136 ..      89     138 .. 0.88
   2 ?   -2.0   0.3      0.66     4e+03      32      51 ..     145     165 ..     143     168 .. 0.62

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 7.5e-07
   G-patch_2  18 GaAlLrGMGWkegqgigknkkgr..vkpeepkrRpgrlGLGakp 59 
                 G A++  MG+k+g + g+  +     +p++++ + +r G+G ++
  KHJ30302.1  93 GLAMMTKMGFKPGAALGRPDNLGarLEPVKIQIKEDRGGIGMDT 136
                 99***************997543569***************986 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.66
   G-patch_2  32 gigknkkgr.vkpeepkrRpg 51 
                 +igk++k+   ++ e++ R +
  KHJ30302.1 145 EIGKENKKLkADEGEYRERVH 165
                 556665554467777877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1724  (0.0961571); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.52
# Mc/sec: 2046.87
//
Query:       KHJ30303.1  [L=645]
Description: putative ectonucleoside triphosphate diphosphohydrolase 7 golgi apyrase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   9.1e-101  337.6   0.0   1.2e-100  337.2   0.0    1.1  1  GDA1_CD39  GDA1/CD39 (nucleoside phosphatase) family
  ------ inclusion threshold ------
      0.041   14.3   0.0      0.088   13.3   0.0    1.5  1  MmlI       Methylmuconolactone methyl-isomerase
      0.061   13.8   0.2        9.7    6.7   0.1    2.4  2  DUF1211    Protein of unknown function (DUF1211)


Domain annotation for each model (and alignments):
>> GDA1_CD39  GDA1/CD39 (nucleoside phosphatase) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  337.2   0.0    2e-104  1.2e-100      14     412 ..       1     452 [.       1     460 [. 0.89

  Alignments for each domain:
  == domain 1  score: 337.2 bits;  conditional E-value: 2e-104
   GDA1_CD39  14 iDAGSsgsrlhvykwkde........kesllqivkliee....vkklePGlSsfekkpeeaa.eylkpllelaeeviPeekrsetpvlikATAGlRLlk 99 
                 +DAGSsg+r+hvy+w ++        +e  l+  ++++      kk++PG+Ssf++   +++ e+l+ ll+ a  ++Pe++ + tp ++ ATAG+RLl+
  KHJ30303.1   1 MDAGSSGTRVHVYRWLNTsrarydakNEIQLNQLPQLHTkpgySKKIKPGVSSFADRITDIGpEHLQSLLDHALSIVPENQVKDTPFFLMATAGVRLLE 99 
                 6***************9966666544333333344444489999*************9777549*********************************** PP

   GDA1_CD39 100 eekkekilkalrnklkklsefkved..qgiriidGeeEGiYgWiaiNYllGkfnkea..pevskqetvgvlDlGGaStQiafepqeeseiaekvedie. 193
                   k+++ ++ +++  k +s+f  ++   ++++i Ge+EG+YgWia NYll  f+  +  +  ++++t g+lD+GGaS+Qiafep+  +e+ ++ +d + 
  KHJ30303.1 100 ATKQKALINEICSYTKTHSDFYLSNcqLHVQVISGETEGLYGWIAANYLLKGFKTLDqeTSGQRNHTYGFLDMGGASAQIAFEPN-ATETEKHANDLNl 197
                 *********************99998679*********************9998766224557889*******************.6777777788876 PP

   GDA1_CD39 194 elklqekledkkyklyvtsfLgyGanealrkklaklikkasee...vlkdpClprglektvevkdle..fkqfaikgtgnyeqCrksikellnknakCk 287
                 +  ++++ + ++yk+++ ++Lg+G+n+a++++ ++l++++  +   +l dpClp gl++ ++   +   ++  a  gtg +++C +++++ll k+a+C 
  KHJ30303.1 198 IRLRTLNGKMSEYKVFTATWLGFGVNQARQRYVKSLMDESYTKdahELLDPCLPSGLKTSIDGIPVSdtHQGSALVGTGLFDECLRKTYPLLDKDAPCV 296
                 889999******************************99877666789************99865554335788999*********************** PP

   GDA1_CD39 288 aeeClfngvfapsidl.lqklfgaseyfYtvsdvlklggek..vklekltealrkfCkknweeikaeskkskeksisee....eaCfkgayvlslLhdG 379
                 +++Cl+ g + p id   ++++g sey+Yt+++v++++++    +++ +++ +r fC+++we+i ++++++k  +  +      +Cfk+++ +s+LhdG
  KHJ30303.1 297 DQPCLLHGQHVPVIDWnINQFVGVSEYWYTLHAVFETVSKSekYNFNLYQQLVRDFCSEEWEDIISNVQEKKWGYDFDVktaqGLCFKASWLMSVLHDG 395
                 ****************788999**************99876668999*********************99886654333355699************** PP

   GDA1_CD39 380 fdldktv........................eelqsvekiaekelgWtLGamlnllk 412
                   ++++                         + +q ++ki + e++Wt G ml ++ 
  KHJ30303.1 396 IGVPRNSlselrpgfndptiltlygndarslDPFQPINKIGNMEVSWTVGKMLLYAA 452
                 ******669********************9999********************9986 PP

>> MmlI  Methylmuconolactone methyl-isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.5e-05     0.088      50      88 ..     303     341 ..     226     347 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.5e-05
        MmlI  50 ftqfvPvveydgypvdgivelWfedlasleksfaspaak 88 
                   q+vPv+++++ ++ g++e+W+   a +e    s++++
  KHJ30303.1 303 HGQHVPVIDWNINQFVGVSEYWYTLHAVFETVSKSEKYN 341
                 569**************************9999998875 PP

>> DUF1211  Protein of unknown function (DUF1211)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.1    0.0016       9.7      37      68 ..     308     339 ..     296     349 .. 0.81
   2 ?    4.5   0.0    0.0077        46      28      61 ..     503     537 ..     484     547 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0016
                 HHHHHHHHHHHHHHHHHHHHHHHHHH-----H CS
     DUF1211  37 psllayllsFlvvasfWlnhhrlfrrikkvde 68 
                 p + + +  F+ v  +W++ h +f+ ++k ++
  KHJ30303.1 308 PVIDWNINQFVGVSEYWYTLHAVFETVSKSEK 339
                 555566778******************99776 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0077
                 HHHHHH.HTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     DUF1211  28 llaall.ellpsllayllsFlvvasfWlnhhrlfr 61 
                 l+++     ++ ++ +ll Fl+++ ++++  r +r
  KHJ30303.1 503 LAEKAHsRSTHGIILFLLFFLIIGYIFRKRDRRLR 537
                 44445523455599*************99988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (645 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      573  (0.0319594); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 4314.58
//
Query:       KHJ30304.1  [L=358]
Description: hypothetical protein EV44_g5126 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2722.49
//
Query:       KHJ30305.1  [L=380]
Description: putative mitochondrial carrier protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.7e-61  202.1   4.2    3.8e-22   78.0   0.1    3.4  3  Mito_carr        Mitochondrial carrier protein
     0.0064   15.7   0.0       0.64    9.1   0.0    2.4  2  Serine_protease  Gammaproteobacterial serine protease


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.0   0.1   4.2e-26   3.8e-22       5      94 ..      55     146 ..      53     149 .. 0.92
   2 !   59.9   0.0   1.9e-20   1.7e-16       4      94 ..     153     265 ..     150     268 .. 0.94
   3 !   63.9   0.2     1e-21   9.4e-18       4      93 ..     290     378 ..     288     380 .] 0.94

  Alignments for each domain:
  == domain 1  score: 78.0 bits;  conditional E-value: 4.2e-26
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS....HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa....ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                 ++++ laGglag++a+++++Pld+vK+ +q+++ + +     +    ++ ++++i  ++G++gl+rG +++++r++p++a+kf++ye+++ +l 
  KHJ30305.1  55 IWRSGLAGGLAGSAAKTIVAPLDRVKILFQSSNPQFSRYA--GswlgVVTAIRQIKATDGISGLFRGHSATIIRIFPYAAIKFLTYEQIRSFLI 146
                 68999****************************9987633..34799*******************************************9986 PP

  == domain 2  score: 59.9 bits;  conditional E-value: 1.9e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS......................HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHH CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa......................ildvlkkiykeeGlrglyrGllpnllrvapasa 80 
                 + l++ll+G+lag++++++t+Pl+v+++rl  + k++++s +++                      + + l+ki + + ++ +yrG++++++++ p+++
  KHJ30305.1 153 TSLRRLLSGSLAGVASVFFTYPLEVIRVRLAFETKKGASSSFSHickiiynevppspqsirfpkeaVKNPLQKISQRNKFANFYRGFSVTVIGMLPYAG 251
                 66899*******************************99999999999***************999999999**************************** PP

                 HHHHHHHHHHHHHC CS
   Mito_carr  81 lkfvlyetlkrlll 94 
                 + f++ +t+ +++ 
  KHJ30305.1 252 MSFLTHDTIGDFFR 265
                 ********999886 PP

  == domain 3  score: 63.9 bits;  conditional E-value: 1e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 + ++el+aGg+ag+v+++ ++P++vv+ r+q+++  +      +i ++   i++e+G+rg + Gl++  ++++p  a+ f +ye +k +l
  KHJ30305.1 290 RSWAELCAGGIAGVVSQTSAYPFEVVRRRMQVSGAVGDGHP-MRIKETACLIFREKGIRGYWVGLTIGYVKMVPMVAVSFYVYERVKSVL 378
                 6799********************************98754.45*******************************************987 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0   7.1e-05      0.64     168     196 ..     149     177 ..     121     191 .. 0.79
   2 !    4.0   0.0    0.0027        24     173     212 ..     291     330 ..     278     345 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 7.1e-05
  Serine_protease 168 kindelynkllaGalsGviAtvlttifns 196
                      + +++  ++ll+G l+Gv   ++t+++  
       KHJ30305.1 149 PTQETSLRRLLSGSLAGVASVFFTYPLEV 177
                      7789999******************9876 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.0027
  Serine_protease 173 lynkllaGalsGviAtvlttifnsykDkkllaskvengrl 212
                        ++l+aG ++Gv+  + +++f   + +  +   v +g+ 
       KHJ30305.1 291 SWAELCAGGIAGVVSQTSAYPFEVVRRRMQVSGAVGDGHP 330
                      56789*******************9999999999988873 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       408  (0.0227564); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2639.69
//
Query:       KHJ30306.1  [L=214]
Description: putative 60s ribosomal protein l13 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-77  259.5   0.4    1.6e-77  259.5   0.4    1.3  2  Ribosomal_L13e  Ribosomal protein L13e


Domain annotation for each model (and alignments):
>> Ribosomal_L13e  Ribosomal protein L13e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  259.5   0.4   8.7e-82   1.6e-77       1     180 []       8     191 ..       8     191 .. 0.90
   2 ?   -4.3   0.7      0.78   1.4e+04      25      35 ..     199     209 ..     195     213 .. 0.42

  Alignments for each domain:
  == domain 1  score: 259.5 bits;  conditional E-value: 8.7e-82
  Ribosomal_L13e   1 vipnnhfrKdwqrrvktwfdqparkkrRrearqakaakvaprpvekLrPvVrcptvrYntkvraGrGFtleElkaagiskklArtiGIavDhRrk 95 
                     +ipnnhfrKdwqrrv+++fdqp+rk rRr+arq+kaa++aprp++kLrP+Vrcpt++Yn++vraGrGF+l+Elk+agi++klA+tiGI+vD+Rr+
      KHJ30306.1   8 QIPNNHFRKDWQRRVRVHFDQPGRKLRRRNARQEKAAAIAPRPIDKLRPIVRCPTIKYNRRVRAGRGFSLAELKEAGIPRKLAPTIGISVDPRRQ 102
                     69********************************************************************************************* PP

  Ribosomal_L13e  96 nkseeslkaNveRLkeYkskLilfprkakkpkkgdaskeelkaak..qvkvaavlpikkeakkekaraiteee....kkfkayrtlrkara 180
                     n seesl+ Nv+RLk+Y+++Lilfprk++kpkkgd+sk+++++ak   ++ ++ lpi+ +  +  +++i +++     +  ayr+lr+ar+
      KHJ30306.1 103 NLSEESLAINVNRLKTYRARLILFPRKSGKPKKGDSSKTDIQEAKslVTTLKSSLPIVGN--TPFFSEIPTSQipesIEGGAYRKLRDARS 191
                     *******************************************99555577889998833..222333322222212599*******9985 PP

  == domain 2  score: -4.3 bits;  conditional E-value: 0.78
  Ribosomal_L13e  25 kkrRrearqak 35 
                     +++R ++++  
      KHJ30306.1 199 REKRAKQKADE 209
                     33333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      229  (0.0127726); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1667.14
//
Query:       KHJ30307.1  [L=380]
Description: hypothetical protein EV44_g1736 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.022   14.4   2.9      0.052   13.3   2.9    1.6  1  Yae1_N       Essential protein Yae1, N terminal
      0.043   14.1   0.0      0.085   13.1   0.0    1.4  1  RVT_connect  Reverse transcriptase connection domain


Domain annotation for each model (and alignments):
>> Yae1_N  Essential protein Yae1, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   2.9   5.8e-06     0.052      11      34 ..     273     296 ..     268     298 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 5.8e-06
      Yae1_N  11 eqglqeGfdeGyqeGaqlGlelGq 34 
                 ++g+q+G+++G  eG+++G++ G 
  KHJ30307.1 273 QHGYQQGYHDGQYEGYRRGYAYGN 296
                 688999999999999999988886 PP

>> RVT_connect  Reverse transcriptase connection domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   9.5e-06     0.085      29      90 ..      31      93 ..       4      99 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 9.5e-06
                 TEEEEEEEEE-STSSEE-HHH.HHHHHHHHHHHHHHHHHSS-EEEEESB-HHHHHHHHHHTSS CS
  RVT_connect 29 fkilkvgkyakiknahtndvk.llaevvqkitkealviwgkipkfklpveketwetwwdeywq 90
                 f+ l + +  + ++ h  d +  la+vv+k+  e   iwg i         e we +w ++ q
   KHJ30307.1 31 FNFLEIIRGVRERGLHPCDFEgPLARVVRKLLDEDYDIWGFIVIKTWRTSTEVWELFWGHFMQ 93
                 566666777778888888876359*******************9999***********99988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       643  (0.0358637); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2677.33
//
Query:       KHJ30308.1  [L=473]
Description: putative argininosuccinate lyase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.2e-85  284.8   0.0    1.3e-84  284.3   0.0    1.2  1  Lyase_1        Lyase
    4.9e-22   78.5   0.0      1e-21   77.4   0.0    1.6  1  ASL_C2         Argininosuccinate lyase C-terminal
  ------ inclusion threshold ------
       0.12   12.0   0.1       0.39   10.3   0.1    1.8  2  Phage_fiber_2  Phage tail fibre repeat


Domain annotation for each model (and alignments):
>> Lyase_1  Lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  284.3   0.0   2.2e-88   1.3e-84       1     312 []      22     318 ..      22     318 .. 0.98

  Alignments for each domain:
  == domain 1  score: 284.3 bits;  conditional E-value: 2.2e-88
                 CEEEEETCHHHHHHHHHHHHHGGGHHHHHCHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHCHCHHCGGHHHBSSSSSHHHHHHHHHHHHHHHHTTHSS CS
     Lyase_1   1 grftvkadklmgiftersrenfrlseedikalaalkkaaakanvdlkeeaaaiikaldevleegklddqfvlkviqegsgtavnmnlnevigellgekv 99 
                 grft+  d+lm  ++e+++++ +   +di +++a+++a     ++ + e  ai+++l +v +e+ ++   ++  i+e+++ta++++l e+ig      +
  KHJ30308.1  22 GRFTGGLDPLMVSYNESIYFDRKFHTQDILGSIAWARANLRIHIIDEAEFTAIENGLIQVENEWLSNTFKIIPGIDEDIHTANERRLGEIIG------K 114
                 899****************************************************************77778889*****************......8 PP

                 GIIIIITTT--HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTT-EEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTCEET CS
     Lyase_1 100 epndkvhtgqSsnDqvpTalrlalkkalsekLlpaleqLidalkekakefkdvvkiGrThlqdAtPvtlgqelsayaealerdrerlkellkrllvell 198
                 ++++k+htg+S+n+q++T++r++l+ +l  k+ + l+++ ++++ +a+ + d +++G+Thlq+A+P+++++++ +ya a+ +d+erl+++ +r+++ +l
  KHJ30308.1 115 DIAGKLHTGRSRNEQIATDMRMWLRGEL-RKIRELLKNFLQTMVSRAEHEIDHIMPGYTHLQRAQPIRWSHWILSYAMAISEDLERLEQMITRVNKCPL 212
                 ****************************.66******************************************************************** PP

                 TTTTTTSSTTTSCCTHHHHHHHHHHHHHCSTEESSSHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTSSEEEEGCCTSSC-TTSTTTEBT CS
     Lyase_1 199 gggtavgtglnadpefaelvakelakvtglpvkapnsfeavsdrDavvellgalkllatsLskfaeDlrllssgeaglvelslaesepGSSiMPgKvNP 297
                 g+g+++g+ ++++++   l+a+el+ ++       ns+ avs+rD+ +el+++ ++++ ++s+++eD++++ss+e g+v+ls+a+s+ GSS+MP+K+NP
  KHJ30308.1 213 GAGALAGNCFGINRK---LIADELG-FDD---LVWNSMGAVSSRDFAIELMQWGSMFMSHISRMSEDIIIYSSSEYGFVKLSDAYST-GSSLMPHKKNP 303
                 ***************...*******.888...899****************************************************.*********** PP

                 HHHHHHHHHHHHHHH CS
     Lyase_1 298 vqlElltgvagrvvG 312
                 ++lEll+g++gr++G
  KHJ30308.1 304 DSLELLRGKSGRAFG 318
                 ************998 PP

>> ASL_C2  Argininosuccinate lyase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.4   0.0   1.7e-25     1e-21       1      69 []     380     448 ..     380     448 .. 0.99

  Alignments for each domain:
  == domain 1  score: 77.4 bits;  conditional E-value: 1.7e-25
                 STTHHHHHHHHHHCTS-HHHHHHHHHHHHHHHHHTT--GGG--HHHHHHH-TT--GGGGGGSSHHHHTT CS
      ASL_C2   1 FstATdlADyLvrkGlpFReAHeivgravrlaeekgkeleeltleelkeisplleedveeaLdpeasVa 69 
                 F+ ATdlADyLv kG+pFReAH+i+g++v+++e+++++++ + l+ ++ i+++++ed++e++d+++sV+
  KHJ30308.1 380 FMVATDLADYLVLKGVPFREAHQISGKCVAYSEKNDVPMNRMYLSNFQDIDKRFDEDIFEIFDYHHSVE 448
                 99*****************************************************************96 PP

>> Phage_fiber_2  Phage tail fibre repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   6.5e-05      0.39       3      17 ..     279     292 ..     277     296 .. 0.84
   2 ?   -2.3   0.0      0.57   3.4e+03      24      34 ..     456     467 ..     452     470 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 6.5e-05
  Phage_fiber_2   3 tqkGivqLssatdSt 17 
                    +++G+v+Ls+a+ St
     KHJ30308.1 279 SEYGFVKLSDAY-ST 292
                    79**********.66 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.57
  Phage_fiber_2  24 TpkA.VKtayDk 34 
                    T+kA V +++Dk
     KHJ30308.1 456 TSKAsVQNQIDK 467
                    99**99999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (473 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3326.90
//
Query:       KHJ30309.1  [L=122]
Description: hypothetical protein EV44_g2439 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.012   14.7   5.4      0.012   14.6   5.4    1.0  1  DUF1704   Domain of unknown function (DUF1704)
      0.049   14.0   2.2       0.06   13.8   2.2    1.0  1  AvrM-A    Flax-rust effector AvrM-A
        2.7    8.1   6.2        2.9    8.0   6.2    1.0  1  DDHD      DDHD domain


Domain annotation for each model (and alignments):
>> DUF1704  Domain of unknown function (DUF1704)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   5.4   2.1e-06     0.012      33     133 ..      16     112 ..       3     122 .] 0.79

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.1e-06
     DUF1704  33 lrreiiedealkkllrekveeyeevvrmLeargtkeFlenSlelYGspsdaleageptllelaefllealselaeeeleeeeekelsaeeaaellqeel 131
                 ++++i ++++ +++  ++ ++y+ + ++++   ++e + +++++Y+  ++ +  ++p+++ ++e+l +    l ++++++++++ ++a   ++++ +++
  KHJ30309.1  16 QQQQILRQAHAQQIAAQQTNQYHHQQEVITPAAQNEIMAYAQRYYQVQKNSIASQNPNVI-ISEELDKQ---LRARAQNAARQHYIQALRRQQFVVAQA 110
                 346677889*****************************************8888888766.77888877...666777777777777766666665555 PP

     DUF1704 132 ea 133
                 ++
  KHJ30309.1 111 AQ 112
                 54 PP

>> AvrM-A  Flax-rust effector AvrM-A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   2.2     1e-05      0.06       2     103 ..       6     112 ..       5     117 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1e-05
      AvrM-A   2 SLaPqALakLtdkeYvrkAalfDkkvarklaqWeaaEkrlddllkelykkqllefkkkkgekklkkk.idviaeklkekakakgkpidek..av...qr 94 
                 SL+Pq + +L +++  r+A    + +a++ +q+ ++ + +    ++     + ++ + + + +  +     i+e+l+++++a++++   +  ++   ++
  KHJ30309.1   6 SLSPQQIHHLQQQQILRQAHAQQI-AAQQTNQYHHQQEVITPAAQNEIMAYAQRYYQVQKNSIASQNpNVIISEELDKQLRARAQNAARQhyIQalrRQ 103
                 9*****************987655.55666777777777766666665566666655566777777724556789*****9999998877442234349 PP

      AvrM-A  95 qfiKeqakl 103
                 qf+  qa++
  KHJ30309.1 104 QFVVAQAAQ 112
                 999999876 PP

>> DDHD  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   6.2   0.00049       2.9      70     158 ..       5      98 ..       1     115 [. 0.70

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00049
        DDHD  70 sklkPvsiprykrrkllhlelkesltsigaalkqkvsglvssls.....allnrslelaeeesaslaessksherasesskasqeskaaessta 158
                  +l+P++i++ +++++l +   ++++  ++++ ++++++++  +     a+ +r +++++++ as++ +   +e+  ++  a+ +++a++++ +
  KHJ30309.1   5 ISLSPQQIHHLQQQQILRQAHAQQIAAQQTNQYHHQQEVITPAAqneimAYAQRYYQVQKNSIASQNPNVIISEELDKQLRARAQNAARQHYIQ 98 
                 5799***********9998888888888777777777777776644443377888888888888887776666666666666666555555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2568  (0.143232); expected 358.6 (0.02)
Passed bias filter:                      603  (0.0336327); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 870.01
//
Query:       KHJ30310.1  [L=246]
Description: hypothetical protein EV44_g5124 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-26   91.2   6.2    3.9e-26   91.2   6.2    1.9  2  DUF3128   Protein of unknown function (DUF3128)


Domain annotation for each model (and alignments):
>> DUF3128  Protein of unknown function (DUF3128)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2      0.33     6e+03      52      67 ..      11      26 ..       4      33 .. 0.51
   2 !   91.2   6.2   2.2e-30   3.9e-26       2      79 .]     118     200 ..     117     200 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.33
     DUF3128 52 ekiqeilkkrerekka 67
                ++ ++ +k++e ek  
  KHJ30310.1 11 SNKKDNIKEKEVEKTS 26
                3444444555554433 PP

  == domain 2  score: 91.2 bits;  conditional E-value: 2.2e-30
     DUF3128   2 lscseafdellsCyslggqfkqyYryGeldnCsekwedfkfClklk....tkksekiqeilkkrerekkakk.kssedvWelR 79 
                 +sc+eafd++++C+slgg f+++YryG+ ++C+e+w++f+fC++++    ++k+++i++++++ e++k  ++  ssed+W+ R
  KHJ30310.1 118 MSCREAFDSAFYCNSLGGSFNHLYRYGTARSCNEHWSKFWFCMRIRtyddESKKTSIKNFYREMEKKKYSERgTSSEDIWKSR 200
                 9*********************************************9999999999************999999*******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1301  (0.072564); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 1878.99
//
Query:       KHJ30311.1  [L=712]
Description: putative transcription factor spt20 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-38  131.4   4.6    3.9e-38  131.4   4.6    3.4  2  Spt20     Spt20 family


Domain annotation for each model (and alignments):
>> Spt20  Spt20 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.4   4.6   2.2e-42   3.9e-38       3     220 ..     117     371 ..     115     381 .. 0.90
   2 ?  -31.5  42.9         1   1.8e+04     105     130 ..     534     605 ..     482     694 .. 0.60

  Alignments for each domain:
  == domain 1  score: 131.4 bits;  conditional E-value: 2.2e-42
       Spt20   3 ekllkkyeeklpslelhlypnhfrfslklnlqsqekkkensseslrlpynselkelleyvdretiPealmelLrdanikfYeGclIvqvrDhrnsvaqs 101
                 e++lkky  + psl++hl+p+hfrf               +++++ +py+s+++ ++e+++++tiP++l+e + d  i  Ye+clIvqv+Dh++  +++
  KHJ30311.1 117 EYILKKYRNNIPSLVIHLHPTHFRF---------------DNQEGHFPYQSPMRLMIEHLRQRTIPHDLVEYFGD--IPYYEDCLIVQVHDHKSIASSE 198
                 78***********************...............***********************************..*******************998 PP

       Spt20 102 qktqdqkqsq..........qnqqqqqqqqqqqqqqqqqqeqqqqqnekdsttteekekksksknnssksktttkkpkvyrtLLrptpqslladlqlla 190
                   +++ k+++          + q+ +++++ q+ +q ++ ++ +      s+++++++ +s++ +nss + +  +kpkv +++L+pt++s +  l+ + 
  KHJ30311.1 199 PPERE-KSPEpkqvlfsvhnYSQYCTPSPYMQYMVQTSSLKKPKR----LSEKSKNDKSESQDTENSSITISSPQKPKVSTVVLHPTNLSKFVNLAVKV 292
                 77762.2222467899999999********999998775444433....34444555555666677777888899*********************999 PP

       Spt20 191 st.................................................srlsdedylelEselllataepLcleps 220
                 ++                                                 + l++++ +++Es++ l t+ pL+lep 
  KHJ30311.1 293 AEtflvdgksncqpetngavylslpstpllsfpstsqtsmpppakrikkskMYLNNNNIYKIESQINLGTTAPLFLEPV 371
                 999**************************************************************************96 PP

  == domain 2  score: -31.5 bits;  conditional E-value: 1
       Spt20 105 q......dqkqsqqnqqqqqqqqqqqqqqqq...........................................q 130
                 q      dq+   +nq  q+q+q q +q++                                            q
  KHJ30311.1 534 QvericsDQQ---SNQGHQNQSQLQHPQSKHiqpphahpqnggssatisgqtqrfhqqishtqspspvirtrtpQ 605
                 1223332222...34444444444444444442333444444444444444444443333333333333333330 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (712 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1577  (0.0879581); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.30s 00:00:01.06 Elapsed: 00:00:00.47
# Mc/sec: 4537.24
//
Query:       KHJ30312.1  [L=252]
Description: hypothetical protein EV44_g0142 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2818  (0.157176); expected 358.6 (0.02)
Passed bias filter:                      807  (0.0450109); expected 358.6 (0.02)
Passed Vit filter:                       659  (0.0367561); expected 17.9 (0.001)
Passed Fwd filter:                       164  (0.00914719); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 2.44u 0.37s 00:00:02.81 Elapsed: 00:00:00.65
# Mc/sec: 1174.83
//
Query:       KHJ30313.1  [L=99]
Description: hypothetical protein EV44_g3322 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 752.35
//
Query:       KHJ30314.1  [L=1222]
Description: hypothetical protein EV44_g5765 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1145  (0.063863); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.77u 0.28s 00:00:01.05 Elapsed: 00:00:00.46
# Mc/sec: 8026.09
//
Query:       KHJ30315.1  [L=679]
Description: putative pescadillo-similar protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     5e-118  393.6   0.1     5e-118  393.6   0.1    1.9  2  Pescadillo_N  Pescadillo N-terminus
  ------ inclusion threshold ------
      0.023   15.1   0.0      0.096   13.1   0.0    2.1  1  BRCT_2        BRCT domain, a BRCA1 C-terminus domain


Domain annotation for each model (and alignments):
>> Pescadillo_N  Pescadillo N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  393.6   0.1  5.6e-122    5e-118       1     261 [.       6     274 ..       6     279 .. 0.97
   2 ?   -2.0   1.6      0.22     2e+03      77     103 ..     611     637 ..     603     656 .. 0.76

  Alignments for each domain:
  == domain 1  score: 393.6 bits;  conditional E-value: 5.6e-122
  Pescadillo_N   1 kkkkegeakkyitrkqalkkLqlslkdFRrLCilKGiyPrepkkkkkankgstaaktyYyakdikfLlhepilekfreikafakklkkalakkekek 97 
                   kk+ +g+ak++itr+qa++kLqlsl+dFR+LCi+KGiyPrep++kkk++k+s+a++t+Yy+kdi++L+hep+l+kfre+k+++kk+ +al+++++++
    KHJ30315.1   6 KKGVSGQAKNFITRTQAVRKLQLSLPDFRKLCIWKGIYPREPRSKKKVSKSSSASTTFYYTKDIQYLAHEPLLTKFREQKTLEKKIARALGRGNAHH 102
                   68999******************************************************************************************** PP

  Pescadillo_N  98 akrleknk........pkykldhiikeRYPtfidAlrdldDaLsliflfatlpktkkikekliekcerlaeefqayviksrslrkvFlSiKGiYyqa 186
                   a++le+n           y+ldhii+eRYPtfidAlrdldD+Ls++flfa+lp+t ++++k+i+kce+l+ ef++y+i s+slrk+FlSiKGiYyqa
    KHJ30315.1 103 ASQLERNAnrpeksgkSIYSLDHIIRERYPTFIDALRDLDDCLSMLFLFANLPSTPTVPAKIIAKCEKLCLEFEHYLIVSNSLRKSFLSIKGIYYQA 199
                   ****9987776655555699***************************************************************************** PP

  Pescadillo_N 187 eikgqkvtWlvPykfaqklekdvdfkvmltflefYetllkfvnfkLykslnlkyppkldeekdekaaelealsle 261
                   +i gq++ WlvPy+f+q++++dvdf++m tf+efY++ll+fvnf+Ly+sl+l yppk+d+++d k ael+a+sl 
    KHJ30315.1 200 SIYGQDLLWLVPYRFNQRITNDVDFRIMGTFVEFYQVLLGFVNFRLYTSLGLVYPPKFDKNRDDKGAELDAFSLG 274
                   ***********************************************************************9986 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.22
  Pescadillo_N  77 reikafakklkkalakkekekakrlek 103
                    + k +a+kl+ ++ak+e+e+++r + 
    KHJ30315.1 611 EKDKNYARKLSAKKAKEEAENIERATM 637
                   566888999999999998888887655 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.1e-05     0.096       2      79 ..     359     466 ..     358     472 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.1e-05
      BRCT_2   2 sklFeglrFYindaepspsreklkklIeknGGev.............veti..tsavyiviaesneee....................laekrkrrvvs 65 
                 s lF++++FY+     ++ r+ l+ l +++G +              +     ++  ++ i+ + + +                    +++ ++r +++
  KHJ30315.1 359 SSLFSNFTFYL---SRETPRQPLEFLLRAFGCNRigwdsilgegaftY--DelDPHITHQIVDRPCIKiggegaseaietenmeklalARRIPGRIYIQ 452
                 789********...66789************97656555555554443..055434444444444444556666666666666689999999******* PP

      BRCT_2  66 pkyIkdCikkgkll 79 
                 p+++ d+i+ ++l 
  KHJ30315.1 453 PQWVWDSINDEELK 466
                 ********999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (679 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1532  (0.0854482); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 4611.24
//
Query:       KHJ30316.1  [L=196]
Description: putative oxidoreductase-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.5e-18   63.6   2.3    1.6e-17   62.8   2.3    1.3  1  Oxidored-like  Oxidoreductase-like protein, N-terminal
     0.0031   17.4   0.4     0.0068   16.3   0.4    1.6  1  DUF5522        Family of unknown function (DUF5522)


Domain annotation for each model (and alignments):
>> Oxidored-like  Oxidoreductase-like protein, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.8   2.3   1.8e-21   1.6e-17       9      42 ..      43      76 ..      39      79 .. 0.92

  Alignments for each domain:
  == domain 1  score: 62.8 bits;  conditional E-value: 1.8e-21
  Oxidored-like  9 pkPeePdnCCmSGCvnCVwdlYredleewkealk 42
                   +kP eP+nCCmSGC++CVwd+Y+e++e+w ++++
     KHJ30316.1 43 KKPVEPENCCMSGCAHCVWDIYAEEMEAWVNHKN 76
                   69***************************98765 PP

>> DUF5522  Family of unknown function (DUF5522)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.4   7.5e-07    0.0068      32      45 ..      49      62 ..      26      64 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 7.5e-07
     DUF5522 32 gkCCgngCRHCPYg 45
                 +CC +gC HC ++
  KHJ30316.1 49 ENCCMSGCAHCVWD 62
                68**********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1526  (0.0851135); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1501.39
//
Query:       KHJ30317.1  [L=588]
Description: putative major facilitator superfamily transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-37  129.1  58.1    2.2e-37  128.8  49.8    2.1  2  MFS_1     Major Facilitator Superfamily
      8e-08   31.6  19.7      8e-08   31.6  19.7    2.7  2  Sugar_tr  Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.8  49.8   2.4e-41   2.2e-37       1     350 [.     150     533 ..     150     536 .. 0.77
   2 !    5.9   1.4   0.00056         5     138     177 ..     536     575 ..     532     587 .. 0.78

  Alignments for each domain:
  == domain 1  score: 128.8 bits;  conditional E-value: 2.4e-41
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlga 99 
                 l+l++++s +++si+++a++ ++++++++s  +  l l+l+ lg+a++ ++++++s+  Grr +++++ l+f+++ +  ++a  + ++l++r+  G+++
  KHJ30317.1 150 LALTTMISVFTSSIFSTAIS-TVSNQYNVSFEVGILGLSLFVLGFAFGPMFWAPMSELKGRRLIIVWSGLGFSIFQIGTAVAKDIQTILLCRFWGGIFG 247
                 6899****************.******************************************************44444546677************* PP

       MFS_1 100 galfpagaaliadwfpkeergraigllsagfslGailgpllgglla.sslgWravfyilaivsllafvlfllll..............peepperkrks 183
                 +a +++++a+++d+f  + rg ai+++s+ + +G++++p +gg+++ s+lgWr++ +++ai+++ +f++ l++l                         
  KHJ30317.1 248 AAPLAVVGAVFVDIFDNRTRGIAIAIFSMVVFIGPLIAPFIGGFITnSYLGWRWTQWLAAILGFTCFLINLFFLeesfdsvilvakaaK---------- 336
                 ********************************************************************877777555444444333332.......... PP

       MFS_1 184 pkeee....................kgtgpaplvp........awkallkdpvlwillialllfffgfsg...lltllplylqevlgls....glllag 247
                                                   +        ++++l+k p    +l+++++++f++ +   +lt  p+ +q  +g+s    gl + g
  KHJ30317.1 337 ----IrqkthnwaihakheeieidlR--------QlfanylsrPIQMLFKEPI---ILLISIYMSFIYGLlylFLTAYPMVFQGIHGMSpgigGLPYFG 420
                 ....2444555544444445644432........1333355568999999994...55555555556666333555555558*******9887544444 PP

       MFS_1 248 lllallalvgailallagrlsdr......lgr.rrrlllallllllaalglallavtssavllll.....vlvliGf.glgfvfpsllalasdlappee 333
                 ++++ + l+g+++ l+   + ++      +g  ++rl  ++l+ +++a+g++++a++  ++ +++     + +l Gf  l ++  sl++++++++    
  KHJ30317.1 421 IISG-MILAGIFVILIQPSYQRKlaannnIGVpEWRLPPMMLGSFAFAIGVFWFAWSGYKASIHWivptlSGILTGFgLLIIFIQSLNYIIDSYL--MF 516
                 2222.222223333444444455555555222799**********************66666666667777777999666666888888888888..99 PP

       MFS_1 334 agtasglfntagslgga 350
                 a++a++++++++ l+ga
  KHJ30317.1 517 AASALAANSLLRFLAGA 533
                 99********9999997 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.00056
       MFS_1 138 pllggllasslgWravfyilaivsllafvlfllllpeepp 177
                 pl++ +l+sslg  ++  il+++s +++ +  ++++  ++
  KHJ30317.1 536 PLFARALLSSLGINWSCTILGGISTILIPIPCVFYYFGHR 575
                 99*************************8855566654444 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6  19.7   8.9e-12     8e-08      44     213 ..     177     340 ..     147     435 .. 0.79
   2 ?   -1.4   1.2     0.088   7.9e+02      77     116 ..     457     498 ..     454     511 .. 0.81

  Alignments for each domain:
  == domain 1  score: 31.6 bits;  conditional E-value: 8.9e-12
                 ...HHH.HHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHH CS
    Sugar_tr  44 ssvlsg.livsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvs 141
                  s  +g l +s+f++G ++G +f  ++++  GR+ +++ +++ f+i ++ +a+ak    ++ ++++R+  Gi+  +  ++v      i   + Rg+ + 
  KHJ30317.1 177 VSFEVGiLGLSLFVLGFAFGPMFWAPMSELKGRRLIIVWSGLGFSIFQIGTAVAK---DIQTILLCRFWGGIFGAAPLAVVGAVFVDIFDNRTRGIAIA 272
                 3444441679*********************************************...9**************************************** PP

                 HHHHHHHHHHHHHHHHHHHH.HTSS-TTHHHHHHHCCHHHHHHHHHH.GGGS---HHHHHHTT-HHHHHHHHHH CS
    Sugar_tr 142 lyqlaitfGilvaaifglgl.nktsnadgwrillglqlvpallllil.llflPESPrylvekgkeeeakevlak 213
                 ++ + + +G l+a ++g ++ n +    gwr++++l++++  + +++ l+fl+ES    + +    +a ++ +k
  KHJ30317.1 273 IFSMVVFIGPLIAPFIGGFItNSYL---GWRWTQWLAAILGFTCFLInLFFLEESFDSVILVA---KAAKIRQK 340
                 ****************976634444...6***********9765544269*****87777777...45555555 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.088
                 HHHHHHHHHHHHHHHHHH-TTTT..SS-TGGGGGHHHHHHHH CS
    Sugar_tr  77 kslliaavlfvigavlqaaakgk..nsvevlivgRvlvGigv 116
                 + ++ +++ f ig +  a++  k   ++ v +++ +l+G+g+
  KHJ30317.1 457 PPMMLGSFAFAIGVFWFAWSGYKasIHWIVPTLSGILTGFGL 498
                 6799999999****9999999767777888888888888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       854  (0.0476323); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.39
# Mc/sec: 4555.07
//
Query:       KHJ30318.1  [L=828]
Description: putative 37s ribosomal protein rsm22 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-33  116.3   0.0    1.5e-31  109.7   0.0    3.1  2  Rsm22     Mitochondrial small ribosomal subunit Rsm22


Domain annotation for each model (and alignments):
>> Rsm22  Mitochondrial small ribosomal subunit Rsm22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.0   0.0    0.0029        53       3      45 ..     364     407 ..     362     436 .. 0.76
   2 !  109.7   0.0   8.2e-36   1.5e-31      97     274 ..     489     747 ..     446     748 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.0029
       Rsm22   3 esiaYalarlpatyavlrrvLdelaervpd.flPkslldvgegp 45 
                 e+ +Y+ a +p+ ya + ++L e+++r  + +l + l+  gegp
  KHJ30318.1 364 EADVYMSAVMPGAYASILSILIEVRKRLGQsWLREFLIGNGEGP 407
                 6779*********************9987624444444444444 PP

  == domain 2  score: 109.7 bits;  conditional E-value: 8.2e-36
       Rsm22  97 ealeleea...dLviisyvLleled.esreklvknlWakask...ilvivEeGtpaGfrrvleaReal.....................kaagfhivAP 167
                 +++ l+     ++vi  y+L+  ++  +r++++knlW  ++    il+++E+G p+Gf+ + eaR ++                      ++++ ivAP
  KHJ30318.1 489 DKAALKGRkmyNIVIAPYTLQAEKEnFKRKDMIKNLWTLVNPkggILIVLEKGLPRGFEAIAEARSFVlktyitssdsnyteyearkleEKENGMIVAP 587
                 3333333355699*******97766589**********99866779********************999**************999987778899**** PP

       Rsm22 168 CPHeaaCPlvate.......dwChFsqrvaRls.lhrlaksasvpvedekfsyvakerqprasa................................... 223
                 C  +++CP+ ++        d+ChFsqr+ R   l+ l + +  ++ed kfsy+   r+ ++ +                                   
  KHJ30318.1 588 CTNHSTCPMYLSPgissgrkDFCHFSQRYVRPPfLQKLLNAKARNHEDLKFSYIVFRRGIDERKnfsdlltgeeatiqsfegyedhdipeshqgedyvk 686
                 ********986544566789**********97526777788899*********88888877777789******************************** PP

       Rsm22 224 .........aaRvvrptkvrskkvlidlCsedetlqrlvvtKrkG.eaykaArkaeWGDrl 274
                           +R++ p+ +r ++v++d+C+   +++r ++ K+   +ay+ Ark++WGD++
  KHJ30318.1 687 tnvkfntlsLPRIILPPLKRHGHVILDVCTPSSRIERWTIPKSFSkAAYRDARKSKWGDLW 747
                 ******************************************65549*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (828 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1041  (0.0580624); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.30s 00:00:00.99 Elapsed: 00:00:00.45
# Mc/sec: 5536.41
//
Query:       KHJ30319.1  [L=342]
Description: putative mis12 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-44  151.7   0.3    2.7e-44  150.5   0.3    1.6  1  Mis12     Mis12 protein
  ------ inclusion threshold ------
      0.033   14.2   0.0      0.077   13.0   0.0    1.6  1  GlgS      Glycogen synthesis protein
      0.067   12.8   0.2          1    8.9   0.0    2.1  2  LOR       LURP-one-related
       0.16   11.8   7.4        1.9    8.3   1.8    2.5  2  DUF724    Protein of unknown function (DUF724)


Domain annotation for each model (and alignments):
>> Mis12  Mis12 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.5   0.3   6.1e-48   2.7e-44       1     134 [.      14     165 ..      14     166 .. 0.95

  Alignments for each domain:
  == domain 1  score: 150.5 bits;  conditional E-value: 6.1e-48
                 HHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH......................TTSTHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Mis12   1 lltehlgftPqsliddiinavndllyravdavekvL..............dkkleedeeeekaaeesteeieeGtakletlleasvDknfdkfElyvlr 85 
                 lltehl ++P +liddi+n++n l+++a++ave++L              +++ + +e++e  ae++++eie+G+++letllea++Dknfd++E+y+lr
  KHJ30319.1  14 LLTEHLTYRPTALIDDIVNSINILAFKATEAVERGLlaadpsdlgfrippQHTTKGKETTEVIAEKAKNEIENGVHQLETLLEAKIDKNFDRLEIYALR 112
                 79***********************************************977888889999************************************** PP

                 CTS---HHHHCCCHCCHHCCTTS....HHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Mis12  86 niltipeelvewvrLphdeglel....eerldeeieelrrkleaelklnkaLk 134
                 nil++p   ++w+rL+h++ +++    +++  e+i  lr+kl++++kl++ L+
  KHJ30319.1 113 NILNVPTAVQDWIRLSHHDSFNFssnnDTPNTETISTLRKKLRETQKLHAFLR 165
                 *******9999************98765559*******************997 PP

>> GlgS  Glycogen synthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.7e-05     0.077      33      56 ..     253     276 ..     247     284 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.7e-05
                 HHHHH--TTHHHHHHHHHHHHHHH CS
        GlgS  33 avtGnmdeahraWFckRYalYckq 56 
                    Gnm+e++++W  +R+ +  ++
  KHJ30319.1 253 DGRGNMSEQQKQWNQERFEFIERE 276
                 557***************987665 PP

>> LOR  LURP-one-related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.043   1.9e+02     144     184 ..      71     111 ..      65     113 .. 0.85
   2 ?    8.9   0.0   0.00023         1      73     146 ..     127     197 ..     123     214 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.043
                 CC--EEEEEEE---.-------B-SEEEEE-TTSBHHHHHHH CS
         LOR 144 esgklvAevkrKet.ikgvllgkDvfklvvkpevDkaliiaL 184
                 e+++++Ae   K++  +gv   +  ++ ++++++D   i aL
  KHJ30319.1  71 ETTEVIAEKA-KNEiENGVHQLETLLEAKIDKNFDRLEIYAL 111
                 5788999997.666599******************9877766 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00023
                 -----EEEEEETT---GGGEEEEEE----------EEEEET..T--...-----SEEEES-TTTT--EEEE.CC- CS
         LOR  73 lslhdrWevyrgesterkdpvftvkrssivslktkvsvfskrksnvvvkeektedfeikGsflkrsckivd.esg 146
                 ls+hd+++  ++++t + + + t++++  + + +k+++f+  +s +  +  +  +  i     +++c+i + +s 
  KHJ30319.1 127 LSHHDSFNFSSNNDTPNTETISTLRKK--LRETQKLHAFLRAESTRNQATISAMKCLI--LKKEQNCSIAEqQSS 197
                 89************************9..************99999555545554455..445788888874444 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   1.8   0.00043       1.9     126     184 ..     141     199 ..     129     202 .. 0.89
   2 ?    6.3   0.1    0.0018       7.9      88     120 ..     239     271 ..     224     310 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00043
      DUF724 126 rkleeeidelekkilelerqlallkekkeaadkeiarlkseaekleeeledveqeFeav 184
                 +   e i+ l kk +e ++  a l+++  ++++ i+++k    k e++++ +eq+ +++
  KHJ30319.1 141 TPNTETISTLRKKLRETQKLHAFLRAESTRNQATISAMKCLILKKEQNCSIAEQQSSKI 199
                 45578999********************************************9997766 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0018
      DUF724  88 kalqsrlnkLlslkdeqtklleerkklekkiee 120
                 + lq rln+L ++kd + ++ e++k+ +++  e
  KHJ30319.1 239 ENLQPRLNQLSEIKDGRGNMSEQQKQWNQERFE 271
                 56899*********************9988665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       824  (0.0459591); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2466.92
//
Query:       KHJ30320.1  [L=243]
Description: putative chromosome segregation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00015   22.3   7.0    0.00019   22.0   7.0    1.2  1  Fez1             Fez1
    0.00039   19.4   4.2    0.00039   19.4   4.2    1.4  1  Spc7             Spc7 kinetochore protein
    0.00049   20.5   4.4    0.00063   20.1   4.4    1.1  1  zf-C4H2          Zinc finger-containing protein
     0.0064   16.5   0.1        4.7    7.3   0.4    3.1  3  DUF1192          Protein of unknown function (DUF1192)
     0.0065   16.9   0.9     0.0065   16.9   0.9    2.3  2  HrpB7            Bacterial type III secretion protein (HrpB7)
     0.0088   16.3   4.9     0.0088   16.3   4.9    2.2  2  ATG16            Autophagy protein 16 (ATG16)
  ------ inclusion threshold ------
      0.016   14.8   4.9      0.023   14.3   4.9    1.3  1  Filament         Intermediate filament protein
      0.022   15.1   4.8       0.45   10.9   0.2    3.5  2  LPP              Lipoprotein leucine-zipper
      0.027   14.9   8.7       0.35   11.4   0.1    3.4  3  NPV_P10          Nucleopolyhedrovirus P10 protein
      0.028   13.0   5.8      0.036   12.7   5.8    1.1  1  Peptidase_M2     Angiotensin-converting enzyme
      0.031   14.5   0.3      0.052   13.7   0.3    1.4  1  Rad54_N          Rad54 N terminal
      0.038   14.6  10.4       0.05   14.2   2.9    3.2  3  SlyX             SlyX
       0.05   12.2   7.5       0.06   12.0   7.5    1.1  1  AAA_13           AAA domain
      0.075   13.1   9.9      0.022   14.9   3.1    2.7  3  Mod_r            Modifier of rudimentary (Mod(r)) protein
       0.12   12.5   2.0       0.19   11.8   1.3    1.6  2  Cob_adeno_trans  Cobalamin adenosyltransferase
       0.17   11.7   6.8       0.59   10.0   0.9    3.2  3  DivIC            Septum formation initiator
       0.19   11.8   3.8        2.9    7.9   0.4    2.1  2  YscO-like        YscO-like protein
       0.25   11.4   3.5       0.31   11.1   0.7    2.4  3  COG2             COG (conserved oligomeric Golgi) complex com
       0.28   11.2   4.3       0.24   11.4   1.8    2.1  2  Noelin-1         Neurogenesis glycoprotein
       0.29   11.4   5.5        2.1    8.6   0.8    2.6  2  TMF_TATA_bd      TATA element modulatory factor 1 TATA bindin
       0.35   11.0   8.9        1.8    8.7   0.1    3.1  3  Tropomyosin_1    Tropomyosin like
       0.45   10.5   7.4        2.4    8.2   1.0    3.0  3  CENP-F_leu_zip   Leucine-rich repeats of kinetochore protein 
       0.47   10.5   3.7       0.36   10.9   1.4    2.0  2  DUF1664          Protein of unknown function (DUF1664)
       0.65   10.3   3.5        2.9    8.2   2.5    2.2  2  DUF948           Bacterial protein of unknown function (DUF94
       0.73    9.2   9.8          4    6.8   9.8    1.9  1  Golgin_A5        Golgin subfamily A member 5
        1.6    8.8  11.6       0.56   10.3   6.3    2.6  3  TPR_MLP1_2       TPR/MLP1/MLP2-like protein
        1.6    9.1   8.6          2    8.8   3.1    3.0  4  BLOC1_2          Biogenesis of lysosome-related organelles co
        2.3    8.5  11.9        1.1    9.5   0.8    3.0  3  DUF5082          Domain of unknown function (DUF5082)
        4.6    6.4   7.3        0.6    9.3   2.8    1.6  2  TMPIT            TMPIT-like protein
        4.7    7.3  15.9        5.4    7.1  12.9    2.4  2  ADIP             Afadin- and alpha -actinin-Binding
        5.2    7.5  10.6        4.5    7.7   2.7    3.5  3  Csm1_N           Csm1 N-terminal domain
        5.3    7.6   8.4        9.9    6.7   1.9    2.7  3  DUF16            Protein of unknown function DUF16
        6.6    7.3   7.8         25    5.4   0.8    2.9  2  ZapB             Cell division protein ZapB
        7.2    7.1  17.2        1.7    9.1   5.5    2.9  3  Syntaxin_2       Syntaxin-like protein
        7.7    7.3  18.5         43    4.9   9.7    3.7  3  FliD_N           Flagellar hook-associated protein 2 N-termin


Domain annotation for each model (and alignments):
>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   7.0   3.7e-07   0.00019      15     153 ..      16     169 ..      12     203 .. 0.74

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 3.7e-07
        Fez1  15 LKqQLkdsqaevtqklseivalkaqlrelrakleekeeeikeleesleektlelevcenelqrk..............kseaellrekvekleeelkel 99 
                 LK+QL    + v+   s++ a + q+ elr++l++  +ei  l++++++kt+++e c n+++                +++ + l++k+++l++e++ l
  KHJ30320.1  16 LKSQLELKGKIVSILNSDLGAGQRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLnsrlsqmilhrstdNDNISFLNDKISSLQSEVNTL 114
                 6777766666666666777778899**********************************999989999********9999999**************** PP

        Fez1 100 reelselsleeeeaalesdeakaqrqe..aeeleelkreverlraeLkeerqkkee 153
                 +++++++  ++++++ +  +ak +r++   ++ +  +++ e+ ++  +  + + ++
  KHJ30320.1 115 QTSFNAKGISTSQTS-NVATAKPRRTRsdLDKYSGAQKDAEKRQTMYESWKTQVHQ 169
                 **9999887766654.3333344443323455555555555544444433333333 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   4.2   7.6e-07   0.00039     196     290 ..      36     126 ..       4     139 .. 0.73

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 7.6e-07
        Spc7 196 idkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwsesevsrlkeevkaleeltgwkivsls 290
                   + ++eelr +l+ +++ei+ +++ ++++++q+e+  ++i++l+++ s++    +    + + + ++ ++ +s+l++ev++l+   + k +s s
  KHJ30320.1  36 AGQRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQMILHRS----TDNDNISFLNDKISSLQSEVNTLQTSFNAKGISTS 126
                 448899***************************99999999999998888765544....44555667777777777777777777766666655 PP

>> zf-C4H2  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   4.4   1.2e-06   0.00063      22     174 ..      37     195 ..      20     230 .. 0.66

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 1.2e-06
     zf-C4H2  22 evealekeekcleeykkelelLeqEkmaHveeLrlIhaDinalEsvikeaeeekekslekakklyeeykklkeevnelrselglekledleeeeeellk 120
                    ++e+ +  l++ ++e+  L+q  ++  +++    +Din+l s + +    ++   ++++ l ++++ l++evn+l+++ + + +++ ++++  + k
  KHJ30320.1  37 GQRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQMILHRSTDNDNISFLNDKISSLQSEVNTLQTSFNAKGISTSQTSNVATAK 135
                 55678889999**********************************************************************999999998888888888 PP

     zf-C4H2 121 eeifekqklkaaavelkkesstapappapptsllskss...qapsa......pstatasfrqq 174
                 +++ ++   k + ++++ e+ ++   +  ++ ++++++               ++ + +++qq
  KHJ30320.1 136 PRRTRSDLDKYSGAQKDAEKRQTMYESWKTQVHQENLPnadD---YagwsemINSIARNLQQQ 195
                 887555544433333322222222222222222222222220...122222112222333333 PP

>> DUF1192  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.4    0.0091       4.7      22      50 ..      41      69 ..      39      72 .. 0.91
   2 ?    4.9   0.0     0.051        26      25      47 ..     100     122 ..      94     131 .. 0.87
   3 ?   -1.4   0.0         5   2.5e+03      12      21 ..     138     147 ..     132     150 .. 0.71

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0091
     DUF1192 22 veELeerIalLeaEIaRleaaiakkkasr 50
                veEL++  ++  +EIa l +++ kk+++ 
  KHJ30320.1 41 VEELRTALSHAHQEIAVLNQTTNKKTQQI 69
                89***********************9875 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.051
     DUF1192  25 LeerIalLeaEIaRleaaiakkk 47 
                 L++ I+ L++E+  l++   +k 
  KHJ30320.1 100 LNDKISSLQSEVNTLQTSFNAKG 122
                 899************99999986 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 5
     DUF1192  12 eigqDLslLS 21 
                   + DL+++S
  KHJ30320.1 138 RTRSDLDKYS 147
                 4579999998 PP

>> HrpB7  Bacterial type III secretion protein (HrpB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.9   1.3e-05    0.0065      12      61 ..      36      85 ..      25     122 .. 0.64
   2 ?    0.1   0.3       1.8   9.1e+02      11      48 ..     133     170 ..     125     189 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1.3e-05
       HrpB7 12 rrarreerlraeleaaraalaaaeaalaaaqaqveaardavraheerldd 61
                + +r+ e+lr +l+ a ++ a +++  +++ +q+ea+ ++ ++ + rl +
  KHJ30320.1 36 AGQRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQ 85
                33455555555555555555555555555555555555555555555555 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 1.8
       HrpB7  11 errarreerlraeleaaraalaaaeaalaaaqaqveaa 48 
                  ++ rr++   ++ + a+++ +++++  ++ ++qv+++
  KHJ30320.1 133 TAKPRRTRSDLDKYSGAQKDAEKRQTMYESWKTQVHQE 170
                 56777777777888888888888899999988888887 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   4.9   1.7e-05    0.0088      84     170 ..      28     114 ..      17     121 .. 0.77
   2 ?    2.5   3.3       0.3   1.5e+02      27      68 ..     100     150 ..      95     204 .. 0.59

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.7e-05
       ATG16  84 aqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnqa 170
                 + l+++l + +++ +el + l  + +e+++l+++++++++++++  +++++l+ +l++   +    +  +  l D +s+Lq ++n +
  KHJ30320.1  28 SILNSDLGAGQRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQMILHRSTDNDNISFLNDKISSLQSEVNTL 114
                 45789999999******************************************9999876666666666665555555555555543 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.3
       ATG16  27 Lldrtsaleaenaklekaaasaks.sksskksakekeasasq........s 68 
                 L d++s+l++e  +l+++ +++   +++ +++a+ k++++++        +
  KHJ30320.1 100 LNDKISSLQSEVNTLQTSFNAKGIsTSQTSNVATAKPRRTRSdldkysgaQ 150
                 668888888888888776666555422223333333333333344443220 PP

>> Filament  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   4.9   4.5e-05     0.023      59     230 ..      30     197 ..      10     212 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 4.5e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    Filament  59 lrkqldeltkerarlqleldnlreeledlrkkyekelnkreevEaelkalrkdldeatlarvdLekkvesLkeelaflkkvheeEvkelqkqvseqvlv 157
                 l + l + +++ + l+  l+++++e++ l++  +k++++ e++ +++++l+  l +  l+r+  +  +  L++ ++ l    + Ev++lq++  +   +
  KHJ30320.1  30 LNSDLGAGQRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQMILHRSTDNDNISFLNDKISSL----QSEVNTLQTSF-NAKGI 123
                 56666777778888999999*******************************************************987....579****9999.66677 PP

                 XXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHH CS
    Filament 158 evdaarkldLteilkeiraqyeel..aeknreeaeewykskleelqeaaeknsealrsakeeitelrrqiqslei 230
                 ++ +++++  +   +  r++ ++   a+k  e+ + +y+s  ++++++   n ++     e i+ + r++q+ ++
  KHJ30320.1 124 STSQTSNVATA-KPRRTRSDLDKYsgAQKDAEKRQTMYESWKTQVHQENLPNADDYAGWSEMINSIARNLQQQQH 197
                 77766666544.457899999986336777778888999999999999999999999999999999999998763 PP

>> LPP  Lipoprotein leucine-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.9       0.3   1.5e+02      24      36 ..      42      54 ..      21      87 .. 0.52
   2 ?   10.9   0.2   0.00088      0.45       7      31 ..      95     119 ..      93     122 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.3
         LPP 24 nsakaaaqaakeE 36
                +++++a+  a +E
  KHJ30320.1 42 EELRTALSHAHQE 54
                3333333333332 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00088
         LPP   7 sqVsqLkskvdqlssdvnsakaaaq 31 
                 +++s L++k+++l+s+vn +++  +
  KHJ30320.1  95 DNISFLNDKISSLQSEVNTLQTSFN 119
                 57999*************9998765 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   1.8      0.03        16      20      65 ..      34      83 ..      10      88 .. 0.60
   2 ?   11.4   0.1   0.00068      0.35      11      36 ..      95     120 ..      83     130 .. 0.80
   3 ?   -0.1   0.1       2.6   1.3e+03      51      66 ..     185     200 ..     164     224 .. 0.53

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.03
     NPV_P10 20 Vdalqqqvddvqe....nlpdvtelnekLdaqsaqLaeletkvenIqdiL 65
                + a q qv+++++     ++++  ln+  ++ ++q+++  + +++ ++ L
  KHJ30320.1 34 LGAGQRQVEELRTalshAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRL 83
                44445555444430000345566666666666666666666666666655 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00068
     NPV_P10  11 adikavddkVdalqqqvddvqenlpd 36 
                 ++i+ ++dk+++lq++v+ +q+ ++ 
  KHJ30320.1  95 DNISFLNDKISSLQSEVNTLQTSFNA 120
                 579999**************998765 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 2.6
     NPV_P10  51 LaeletkvenIqdiLn 66 
                 ++++  ++++ q i  
  KHJ30320.1 185 INSIARNLQQQQHIAK 200
                 3333333333333222 PP

>> Peptidase_M2  Angiotensin-converting enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   5.8     7e-05     0.036      41     178 ..      45     194 ..      33     203 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 7e-05
                   HHHHHHHHHHHHHHHHHHHHHHCCCT.....GGGSS-HHHHHHHHHHT--GGGGS-HHHHHHHHHHHHHHHHHHHH-EEE-SSTT....SSEEETTT CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxx RF
  Peptidase_M2  41 kqakveaklelaefekevakeakkfd.....lksfqdedlkrelkklaslgssalseekleeleevlsemekiyskakvcekkke....keclklep 128
                   ++a  +a++e+a ++++++k++++ +     ++++++   +  l+  +++ + ++ ++k + l++  +++++ ++ + + +++++     +  +   
    KHJ30320.1  45 RTALSHAHQEIAVLNQTTNKKTQQIEaclndINDLNSRLSQMILHRSTDNDNISFLNDKISSLQSEVNTLQTSFNAKGISTSQTSnvatAKPRRTRS 141
                   5556666677777777777777776555222555555555566666666666677888888888888888888876655554333232233355566 PP

                   HHHHHHHH---HHHHHHHHHHHHHHCHH...HHCCCHHHHHHHHHHHHHCTT- CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_M2 129 dleeimaesrdyeellwaWegwrdevgk...plrdkyerfveLsneaaklngf 178
                   dl++  + ++d+e+ ++++e+w+++v +   p+ d+y+ + e+ n++a++ + 
    KHJ30320.1 142 DLDKYSGAQKDAEKRQTMYESWKTQVHQenlPNADDYAGWSEMINSIARNLQQ 194
                   ************************99873335788999999***999987654 PP

>> Rad54_N  Rad54 N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.3    0.0001     0.052       3      93 ..     109     206 ..     107     222 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 0.0001
     Rad54_N   3 dslerLtkpFkvPa...saastreserpaRkrrkvvsYagadgeeeeeesdkkeee...keee....krkdalaarklnkfpvfrlkdketvlkksFsv 91 
                  ++++L+  F   +   s++s+ ++++p R r+   +Y+ga++++e++++  ++ +   + +e    +++ a  ++ +n+    r  ++++++ k  ++
  KHJ30320.1 109 SEVNTLQTSFNAKGistSQTSNVATAKPRRTRSDLDKYSGAQKDAEKRQTMYESWKtqvH-QEnlpnADDYAGWSEMINS--IARNLQQQQHIAKLQTL 204
                 56788999998887777899999999*********9*****9998877654433333432.2246643333333333333..33333334455555555 PP

     Rad54_N  92 Pl 93 
                 P 
  KHJ30320.1 205 PS 206
                 55 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   2.9   9.7e-05      0.05       3      50 ..      39      86 ..      38      96 .. 0.91
   2 ?    2.7   0.0      0.39     2e+02      18      39 ..      96     117 ..      89     136 .. 0.70
   3 ?    0.9   0.3       1.4   7.4e+02      28      38 ..     193     203 ..     186     205 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 9.7e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXX CS
        SlyX  3 erleeLEiklafqedtieeLndvvaeqqqqidrlqrqlrllaerlkel 50
                 ++eeL + l++  + i  Ln++  +  qqi++    ++ l+ rl+++
  KHJ30320.1 39 RQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQM 86
                5799****************************************9876 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.39
                 HHHHHHHHHHHHHHHHHHHHHH CS
        SlyX  18 tieeLndvvaeqqqqidrlqrq 39 
                  i  Lnd +   q ++  lq+ 
  KHJ30320.1  96 NISFLNDKISSLQSEVNTLQTS 117
                 4555666666666666666654 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 1.4
                 HHHHHHHHHHH CS
        SlyX  28 eqqqqidrlqr 38 
                 +qqq i++lq+
  KHJ30320.1 193 QQQQHIAKLQT 203
                 89999*99995 PP

>> AAA_13  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   7.5   0.00012      0.06     315     439 ..      33     157 ..      11     201 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00012
      AAA_13 315 ensafeedkeelkaeaealeeqLkglqraleaKrkepfksve.lesvkakiesikklvaeineliakhNekvanleeekeeakkklelhlv........ 404
                    a ++++eel+++++   +++  l++  ++K +++ + ++ +++++++++++    ++ n++i+  N k+++l++e++++++++ +  +        
  KHJ30320.1  33 DLGAGQRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNdINDLNSRLSQMILHRSTDNDNISFLNDKISSLQSEVNTLQTSFNAKGIstsqtsnv 131
                 345678999*****************************988779******************************************9999843333333 PP

      AAA_13 405 .....eeleseldeykkkykklekaieklekelkeeeael 439
                       + +s+ld+y                ++k++e+++
  KHJ30320.1 132 atakpRRTRSDLDKYS--------------GAQKDAEKRQ 157
                 3333333333333333..............2222222222 PP

>> Mod_r  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   3.1   4.3e-05     0.022      36      93 ..      20      78 ..      14     126 .. 0.79
   2 ?    1.8   1.0      0.47   2.4e+02      40      91 ..      94     146 ..      76     172 .. 0.64
   3 ?   -0.5   0.4       2.3   1.2e+03      63      63 ..     185     185 ..     141     213 .. 0.53

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 4.3e-05
       Mod_r 36 eellaeneslaeknlsl.epeleelrselqekleelkelekefeekeqeldellqkfsp 93
                 el  +++s++++ l   + ++eelr  l+ +++e++ l+++ ++k+q+ ++ l++ ++
  KHJ30320.1 20 LELKGKIVSILNSDLGAgQRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDIND 78
                567788999*******9999******************************999955543 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.47
       Mod_r  40 aeneslaeknlsl.epeleelrselqekleelkelekefeekeqeldellqkf 91 
                 + n+s++++++s+ + e++ l+ ++++k  ++ + ++   +k ++  + l+k+
  KHJ30320.1  94 NDNISFLNDKISSlQSEVNTLQTSFNAKGISTSQTSNVATAKPRRTRSDLDKY 146
                 45666666666665666666666666666555555555555555555555444 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 2.3
       Mod_r  63 l 63 
                 +
  KHJ30320.1 185 I 185
                 2 PP

>> Cob_adeno_trans  Cobalamin adenosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.3   0.00037      0.19      32     130 ..      41     139 ..      29     159 .. 0.74
   2 ?   -1.0   0.0       3.4   1.7e+03     124     124 ..     186     186 ..     126     225 .. 0.52

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00037
                      HHHHHHHHHHHHHHCTTT...THHHHHHHHHHHHHHHHHHHHHHT.-BTCCG-S--HHHHHHHHHHHHHHHHHS--EESEEES-SSHHHHHHHH CS
  Cob_adeno_trans  32 vDelnsaiglarallaee...eeelkeaLeeiqneLfdlgaelatpekkkekkkiteeeveelekeideleaelpplksfilpggspaaaalhv 122
                      v+el  a+  a + +a     +++ ++++e   n++ dl + l+   ++  +++ ++++++ l+++i +l++e+++l++ +  +g  ++   +v
       KHJ30320.1  41 VEELRTALSHAHQEIAVLnqtTNKKTQQIEACLNDINDLNSRLS---QMILHRSTDNDNISFLNDKISSLQSEVNTLQTSFNAKGISTSQTSNV 131
                      67777777777766655533344455555555566666666664...556666677889999*************9998888888888888888 PP

                      HHHHHHHH CS
  Cob_adeno_trans 123 aRtvcRra 130
                      a +  Rr+
       KHJ30320.1 132 ATAKPRRT 139
                      88888875 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 3.4
                      H CS
  Cob_adeno_trans 124 R 124
                       
       KHJ30320.1 186 N 186
                      2 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.9    0.0011      0.59      18      52 ..      47      81 ..      40      90 .. 0.89
   2 ?    2.5   0.0      0.25   1.3e+02      34      51 ..      98     115 ..      82     120 .. 0.62
   3 ?    0.8   0.1      0.83   4.3e+02      14      30 ..     186     202 ..     180     204 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0011
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XX CS
       DivIC 18 aykqlkqeiaalqaelaklkaeneeLeaevkdLks 52
                a++  +qeia l+++ +k+++++e+    ++dL+s
  KHJ30320.1 47 ALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNS 81
                677889***************************53 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.25
                 HHHHHHHHHHHHHHCC-X CS
       DivIC  34 aklkaeneeLeaevkdLk 51 
                   l++++ +L++ev+ L+
  KHJ30320.1  98 SFLNDKISSLQSEVNTLQ 115
                 334555555555555553 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.83
                 XXXXHHHHHHHHHHHHH CS
       DivIC  14 kgllaykqlkqeiaalq 30 
                 +++ +  q++q ia+lq
  KHJ30320.1 186 NSIARNLQQQQHIAKLQ 202
                 55556666666666665 PP

>> YscO-like  YscO-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.4    0.0056       2.9      82     144 ..      16      78 ..      12      90 .. 0.80
   2 ?    5.8   5.1     0.024        13      15     139 ..      39     171 ..      38     177 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0056
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   YscO-like  82 vkeelkqeekkvekQkekVkvAerkvEqareelakkrkeveklekhkeewlkevkkeeekree 144
                 +k +l+ + k v   +    + +r+vE+ r+ l ++++e+  l++  ++ ++++ +  +++++
  KHJ30320.1  16 LKSQLELKGKIVSILNSDLGAGQRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDIND 78 
                 666666666667777777788899*****************9999999888888776666655 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.024
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHH---HHHHHHHHHHHHHHHHHHHH.....HHHHHH.HHHHHHHHHHHH CS
   YscO-like  15 rrveeAEkvvkdkkkaLekEkeklrkleeerdkvkkhkkaKvaqlre.eldkGttsdkikkmkryikvvkeelkq.....eekkve.kQkekVkvAerk 106
                 r+vee   ++++++++++  +++ +k  ++ +   ++ ++  + l + +l + t  d+i  ++  i  ++ e++      ++k +  +Q  +V +A+ +
  KHJ30320.1  39 RQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQmILHRSTDNDNISFLNDKISSLQSEVNTlqtsfNAKGIStSQTSNVATAKPR 137
                 7888888999999999888888888888888888888777666664416888999999*9999999999988765111114555542577777777643 PP

                 HHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHH CS
   YscO-like 107 vEqareelak...krkeveklekhkeewlkevkkee 139
                   + r +l k   ++k+ ek ++  e w  +v +e+
  KHJ30320.1 138 --RTRSDLDKysgAQKDAEKRQTMYESWKTQVHQEN 171
                 ..4555554433389****************99885 PP

>> COG2  COG (conserved oligomeric Golgi) complex component, COG2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.7    0.0006      0.31      63     111 ..      33      81 ..      26      98 .. 0.84
   2 ?   -0.2   0.1       1.9   9.9e+02      65      77 ..     105     117 ..      85     168 .. 0.64
   3 ?   -2.2   0.0       8.1   4.1e+03      93     112 ..     182     201 ..     179     207 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.0006
        COG2  63 hLvglqeeleevesplaaarkkvesvreklsereeeveskleeakelee 111
                  L   q+++ee+++ l++a +++  +++  +++ +++e++l++ ++l++
  KHJ30320.1  33 DLGAGQRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNS 81 
                 6777899**********************************99988865 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.9
        COG2  65 vglqeeleevesp 77 
                  +lq+e+++++++
  KHJ30320.1 105 SSLQSEVNTLQTS 117
                 2233333333333 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 8.1
        COG2  93 sereeeveskleeakeleek 112
                 se+++ +  +l++++++++ 
  KHJ30320.1 182 SEMINSIARNLQQQQHIAKL 201
                 56677777777777776665 PP

>> Noelin-1  Neurogenesis glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.8   0.00046      0.24      38      90 ..      38      90 ..      31     100 .. 0.88
   2 ?   -1.8   0.0       6.2   3.2e+03      60      68 ..     137     145 ..     119     169 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00046
    Noelin-1 38 srqlrqllekvqnlsqsievldlRtsrdlqyvrktetllktlesklkvveedr 90
                +rq+ +l        q+i vl++ t++  q ++   + +++l+s+l+++  +r
  KHJ30320.1 38 QRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQMILHR 90
                78999999999999********************************9986554 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 6.2
    Noelin-1  60 lRtsrdlqy 68 
                 +Rt++dl+ 
  KHJ30320.1 137 RRTRSDLDK 145
                 677777764 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.8    0.0042       2.1      56     106 ..      31      81 ..      15      87 .. 0.48
   2 ?    7.4   0.1    0.0093       4.8      36      79 ..      74     117 ..      68     121 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0042
  TMF_TATA_bd  56 neelkelkkeleelekeleelqeryetlLellGeksEeveELraDvaDlKe 106
                  n +l + ++++eel++ l+  +++   l +   +k+ ++e   +D++Dl  
   KHJ30320.1  31 NSDLGAGQRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNS 81 
                  334444444444444444444444444444444444444444444444433 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0093
  TMF_TATA_bd  36 erleaerdeareeivklmkeneelkelkkeleelekeleelqer 79 
                  + ++   +++++ i++ +++n++ + l++++++l++e++ lq+ 
   KHJ30320.1  74 NDINDLNSRLSQMILHRSTDNDNISFLNDKISSLQSEVNTLQTS 117
                  5666677889999***************************9986 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   1.0     0.025        13      45      90 ..      28      74 ..      18      86 .. 0.71
   2 ?    8.7   0.1    0.0036       1.8      30      73 ..      90     133 ..      76     141 .. 0.78
   3 ?    0.1   0.5       1.6     8e+02      49      77 ..     141     171 ..     124     200 .. 0.64

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.025
  Tropomyosin_1 45 qqleeevekleeklkeakekaeesekk.ktnnealtrkiqlLEeele 90
                   + l++++   + +++e ++++++++++ +  n + ++k q++E  l+
     KHJ30320.1 28 SILNSDLGAGQRQVEELRTALSHAHQEiAVLNQTTNKKTQQIEACLN 74
                   56788888888888888888888877624456688888888886554 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0036
  Tropomyosin_1  30 nlekeqeiksLtkknqqleeevekleeklkeakekaeesekkkt 73 
                    +   +++i+ L+ k++ l++ev++l+++ +    + +++++ +t
     KHJ30320.1  90 RSTDNDNISFLNDKISSLQSEVNTLQTSFNAKGISTSQTSNVAT 133
                    5567889********************99887776666666555 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 1.6
  Tropomyosin_1  49 eevekleeklkeake..kaeesekkktnnea 77 
                    ++++k++ + k+a++  ++ es k++ ++e+
     KHJ30320.1 141 SDLDKYSGAQKDAEKrqTMYESWKTQVHQEN 171
                    5555555554444330023333333444444 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   1.0    0.0047       2.4      44      91 ..      38      85 ..      15      87 .. 0.65
   2 ?    7.4   2.0     0.008       4.1      24      77 ..      67     120 ..      62     175 .. 0.88
   3 ?   -0.4   0.2         2     1e+03      67      67 ..     171     171 ..     143     208 .. 0.54

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0047
  CENP-F_leu_zip 44 ileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqk 91
                     +++E+ + +++  ++ei  l++++++ +++++a+ ++ ++L+  l +
      KHJ30320.1 38 QRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQ 85
                    456666666666666666666666666666666666666666666654 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.008
  CENP-F_leu_zip  24 dkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLva 77 
                     +++e+   +++++++ ++++il   t    ++ l+++i  l++e + l++ ++a
      KHJ30320.1  67 QQIEACLNDINDLNSRLSQMILHRSTDNDNISFLNDKISSLQSEVNTLQTSFNA 120
                     6788888999999**********************************9998875 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 2
  CENP-F_leu_zip  67 e 67 
                     +
      KHJ30320.1 171 N 171
                     1 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.4   0.00071      0.36      54     122 ..      41     109 ..      25     124 .. 0.86
   2 ?   -1.3   0.0         4   2.1e+03      66      81 ..     183     198 ..     141     203 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00071
     DUF1664  54 seslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskleriee 122
                  e+l+++  h  ++i+ ++++ ++ ++ +++  ++++++++ ls++    ++ ++ ++ l+ k++++++
  KHJ30320.1  41 VEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQMILHRSTDNDNISFLNDKISSLQS 109
                 467888888889999999999999999999999999999999999988888888888888888888875 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 4
     DUF1664  66 sridrvdkkldeqkei 81 
                 + i+++ ++l++q++i
  KHJ30320.1 183 EMINSIARNLQQQQHI 198
                 4455566666666555 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   2.5    0.0056       2.9      23      63 ..      43      83 ..      36     114 .. 0.76
   2 ?    0.3   0.1       1.6   8.4e+02      35      58 ..      97     120 ..      90     134 .. 0.67

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0056
      DUF948 23 klkktldeaaatieelekqvdpilkevedllakvnelledv 63
                +l+  l++a + i++l++ +++ ++++e+ l+ +n+l + +
  KHJ30320.1 43 ELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRL 83
                56777888888888888888888888888888888865444 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 1.6
      DUF948  35 ieelekqvdpilkevedllakvne 58 
                 i  l++++ ++  ev++l +  n+
  KHJ30320.1  97 ISFLNDKISSLQSEVNTLQTSFNA 120
                 555666677777777766666665 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   9.8    0.0079         4      20     125 ..      20     120 ..      17     203 .. 0.60

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0079
   Golgin_A5  20 LQsKekliasLkegsgeeglesstalsaeldelkqerdllreelqklnqqieqlrtelqdleaqqqaeaeslreqlqeleeqleeerkakeeveaeler 118
                 L  K k+++ L ++ g+ + +  ++l ++l++++qe  +l++ ++k +qqie + ++++dl+++ ++ + +     +  +++++  + +  ++++e++ 
  KHJ30320.1  20 LELKGKIVSILNSDLGAGQRQV-EELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQMILH----RSTDNDNISFLNDKISSLQSEVNT 113
                 6679999999998876666555.789999********************************9987553322....111222222222333333333333 PP

   Golgin_A5 119 lkeelry 125
                 l+  +++
  KHJ30320.1 114 LQTSFNA 120
                 3333332 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   1.7    0.0096       4.9      69     109 ..      37      77 ..      26      86 .. 0.57
   2 ?   10.3   6.3    0.0011      0.56       2      88 ..      40     126 ..      39     159 .. 0.87
   3 ?   -1.2   0.2       3.9     2e+03      22      39 ..     183     200 ..     164     203 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0096
  TPR_MLP1_2  69 lkaeiaelkaeaesakaeleeseesweeqkeelekelsele 109
                  + +++el++++  a++e++   +  +++ +++e  l++++
  KHJ30320.1  37 GQRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDIN 77 
                 45566666666666666666666666666666665555544 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0011
  TPR_MLP1_2   2 elksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaele 88 
                 ++++l++ ++ + +e++ ++++ +k  +++e+  +  ++ + + ++ +++ ++d ++++ l++++++l++e+++l+++ ++   + +
  KHJ30320.1  40 QVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQMILHRSTDNDNISFLNDKISSLQSEVNTLQTSFNAKGISTS 126
                 7899************************************************************************99877655555 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 3.9
  TPR_MLP1_2  22 aklqklqedlekqaeiak 39 
                 + ++++ ++l++q+ iak
  KHJ30320.1 183 EMINSIARNLQQQQHIAK 200
                 567777888888888876 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   1.1    0.0081       4.1      33      77 ..      38      86 ..      15      89 .. 0.61
   2 ?    8.8   3.1    0.0039         2      26      84 ..      56     114 ..      46     120 .. 0.89
   3 ?   -1.3   0.1       5.5   2.8e+03      42      64 ..     145     167 ..     137     172 .. 0.70
   4 ?    1.2   0.1      0.89   4.6e+02      26      54 ..     168     196 ..     157     204 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0081
     BLOC1_2 33 sekykklkdvaaslekkleklne....kyeelqpylqqidqiekqvteL 77
                ++++++l+++++++++++  ln+    k ++++  l+ i++++ +++++
  KHJ30320.1 38 QRQVEELRTALSHAHQEIAVLNQttnkKTQQIEACLNDINDLNSRLSQM 86
                5667777777777777776666511114556666666666666666655 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0039
     BLOC1_2  26 eklNeaasekykklkdvaaslekkleklnekyeelqpylqqidqiekqvteLeeavseL 84 
                   lN+++++k ++++  ++++++  ++l+++  + +   ++i  +++++++L++ v+ L
  KHJ30320.1  56 AVLNQTTNKKTQQIEACLNDINDLNSRLSQMILHRSTDNDNISFLNDKISSLQSEVNTL 114
                 5699*************************999999999999999999999999999988 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 5.5
     BLOC1_2  42 vaaslekkleklnekyeelqpyl 64 
                 + ++++k++ek + +ye+ + ++
  KHJ30320.1 145 KYSGAQKDAEKRQTMYESWKTQV 167
                 45666777777777777766665 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.89
     BLOC1_2  26 eklNeaasekykklkdvaaslekklekln 54 
                 ++ N   +  y+ ++++++s++++l++ +
  KHJ30320.1 168 HQENLPNADDYAGWSEMINSIARNLQQQQ 196
                 56777788899999999999999998865 PP

>> DUF5082  Domain of unknown function (DUF5082)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.8    0.0022       1.1      80     122 ..      38      80 ..      24      81 .. 0.89
   2 ?    6.1   0.1     0.025        13      90     114 ..      97     121 ..      88     130 .. 0.71
   3 ?   -1.3   0.7       4.9   2.5e+03      46      67 ..     149     171 ..     137     196 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0022
     DUF5082  80 qtyvdkldelidaieeEIerLenqiseaqgvldtlqsqlnslk 122
                 q+ v++l+++ ++  +EI  L ++ +++++ ++ + + +n+l+
  KHJ30320.1  38 QRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLN 80 
                 667889999999999************************9996 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.025
     DUF5082  90 idaieeEIerLenqiseaqgvldtl 114
                 i+ ++++I+ L+++++++q++ + +
  KHJ30320.1  97 ISFLNDKISSLQSEVNTLQTSFNAK 121
                 4557778888888888887776655 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 4.9
     DUF5082  46 kkkklekplnssesWkGk.eenn 67 
                 ++k+ ek    +esWk + +++n
  KHJ30320.1 149 AQKDAEKRQTMYESWKTQvHQEN 171
                 45666666666777777766555 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.8    0.0012       0.6       8      91 ..      38     120 ..      31     125 .. 0.85
   2 ?    0.6   0.8      0.51   2.6e+02       5      59 ..     105     159 ..     100     205 .. 0.36

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0012
       TMPIT   8 ekefkeleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvkeeeeeeveelkeelkerkkvlkevesllpk 91 
                 +++++el+++ ++ +q+++ l++  +k +++i+ + +++++l+s+l+++  + ++ ++++++ l++++++ ++ ++ ++ ++ +
  KHJ30320.1  38 QRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQMILH-RSTDNDNISFLNDKISSLQSEVNTLQTSFNA 120
                 5677888888889999999999999999999999999999999999999888.5789999999999999999999888877765 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.51
       TMPIT   5 eelekefkeleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkks 59 
                 ++l++e+++l+++++    ++ ++s+  ++  +++++   +++  +++ +k ++ 
  KHJ30320.1 105 SSLQSEVNTLQTSFNAKGISTSQTSNVATAKPRRTRSDLDKYSGAQKDAEKRQTM 159
                 4455555555554432222222222222221111111111111111111111111 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  12.9     0.011       5.4      26     135 ..      58     170 ..      13     171 .. 0.86
   2 ?   -1.5   0.0       4.5   2.3e+03      44     111 ..     184     199 ..     177     204 .. 0.51

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.011
        ADIP  26 a...tekveeniaaiinviysLlqardrdleqreslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrl 121
                     t+k++++i+a +n i++L  ++++ + +r + n+ i+ l+  i++lqs+++ l+t+  ++   +++  +  +   ++ ++  +k  + + ++++ 
  KHJ30320.1  58 LnqtTNKKTQQIEACLNDINDLNSRLSQMILHRSTDNDNISFLNDKISSLQSEVNTLQTSFNAKGISTSQTSNVATAKPRRTRSDLDKYSGAQKDAEKR 156
                 14445899******************************************************9999999777777777778888888888888889999 PP

        ADIP 122 knalqqiktqyahe 135
                 ++  ++ ktq+ +e
  KHJ30320.1 157 QTMYESWKTQVHQE 170
                 9999******9887 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 4.5
        ADIP  44 Llqardrdleqreslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqkl 111
                 ++ +  r+l+q++                                                      +
  KHJ30320.1 184 MINSIARNLQQQQH----------------------------------------------------IA 199
                 44444444444443....................................................33 PP

>> Csm1_N  Csm1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.1      0.79   4.1e+02      31      64 ..      15      48 ..      14      54 .. 0.63
   2 ?    7.7   2.7    0.0087       4.5      19      60 ..      45      86 ..      36      96 .. 0.80
   3 ?    2.9   0.1      0.27   1.4e+02      40      56 ..     101     117 ..      89     130 .. 0.59

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.79
      Csm1_N 31 vLsqkletkdqeiesLkeqlaeleekvkeleerr 64
                vL+ +le k + ++ L   l + + +v+el +  
  KHJ30320.1 15 VLKSQLELKGKIVSILNSDLGAGQRQVEELRTAL 48
                5667777777777777777777777766665543 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0087
      Csm1_N 19 dllvsklvhENsvLsqkletkdqeiesLkeqlaeleekvkel 60
                  + s   +E  vL+q++++k+q+ie+  + ++ l+++++++
  KHJ30320.1 45 RTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQM 86
                556677778999*************************99986 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.27
      Csm1_N  40 dqeiesLkeqlaeleek 56 
                 +++i+sL+ ++++l++ 
  KHJ30320.1 101 NDKISSLQSEVNTLQTS 117
                 34555555555555544 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   1.9     0.019       9.9      61     101 ..      38      85 ..      10      89 .. 0.49
   2 ?    5.4   0.1     0.051        26      51      80 ..      91     124 ..      74     148 .. 0.62
   3 ?   -1.4   0.1       6.6   3.4e+03      82      82 ..     182     182 ..     138     204 .. 0.50

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.019
                 HHHHHHHHHHHHHHHH..............HHHHHHHHHHHHHHHHHH CS
       DUF16  61 gekikelkveqkaqgeeln.......kvdetleliletLqkinkRlDs 101
                 + +++el+      ++e+        k  + +e  l+ ++++n Rl +
  KHJ30320.1  38 QRQVEELRTALSHAHQEIAvlnqttnKKTQQIEACLNDINDLNSRLSQ 85 
                 333333333333333333333332224444455555555555555544 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.051
                 HHHHHHHHHHHHHHHHHHHHHHHHHH........ CS
       DUF16  51 nkleqkvekqgekikelkveqkaqgeeln....k 80 
                 +  +++++ +++ki+ l+ e+++ + ++n    +
  KHJ30320.1  91 STDNDNISFLNDKISSLQSEVNTLQTSFNakgiS 124
                 4455666666777777777777766666633332 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 6.6
                 . CS
       DUF16  82 d 82 
                  
  KHJ30320.1 182 S 182
                 1 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   1.2     0.076        39      26      64 ..      40      78 ..      34      88 .. 0.45
   2 ?    5.4   0.8     0.049        25      16      34 ..     100     118 ..      94     203 .. 0.72

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.076
        ZapB 26 eieeLkeeneelkeenreleeeneqlkeereawqerlkk 64
                ++eeL+   +   +e++ l++  ++  ++ ea  + ++ 
  KHJ30320.1 40 QVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDIND 78
                444444444444444444444333333333333333333 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.049
        ZapB  16 aidtitlLqmeieeLkeen 34 
                 + d+i++Lq e+  L+   
  KHJ30320.1 100 LNDKISSLQSEVNTLQTSF 118
                 3355555555555555443 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   4.0     0.008       4.1      20      75 ..      32      88 ..      16      94 .. 0.67
   2 ?    9.1   5.5    0.0032       1.7       1      66 [.      69     135 ..      69     162 .. 0.83
   3 ?   -1.3   0.1       5.4   2.8e+03      45      59 ..     184     198 ..     181     207 .. 0.49

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.008
  Syntaxin_2 20 kqLgtk.kdteelreklhelieeinelikktnellkklsqldnsssdsqqklqkekL 75
                ++Lg   ++ eelr  l    +ei  l ++tn++ ++++++ n  +d + +l++  L
  KHJ30320.1 32 SDLGAGqRQVEELRTALSHAHQEIAVLNQTTNKKTQQIEACLNDINDLNSRLSQMIL 88
                345555357888887777777777777777777777777777766665555555444 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0032
  Syntaxin_2   1 issnlqkinsnvstleklvkqLgtkkd.teelreklhelieeinelikktnellkklsqldnsssds 66 
                 i++ l  in ++s l +++ + +t++d    l++k+ +l++e+n+l +  n++  + sq +n    +
  KHJ30320.1  69 IEACLNDINDLNSRLSQMILHRSTDNDnISFLNDKISSLQSEVNTLQTSFNAKGISTSQTSNVATAK 135
                 6778999**************999998455688**************99999988888887777655 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 5.4
  Syntaxin_2  45 likktnellkklsql 59 
                 +i+ + ++l++ +++
  KHJ30320.1 184 MINSIARNLQQQQHI 198
                 344444444433333 PP

>> FliD_N  Flagellar hook-associated protein 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.5       3.1   1.6e+03      30      55 ..      20      45 ..      16      68 .. 0.43
   2 ?    4.9   9.7     0.083        43      23      76 ..      62     135 ..      38     139 .. 0.61
   3 ?    3.2   1.1      0.27   1.4e+02      17      45 ..     140     168 ..     137     199 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 3.1
                XXXXHHHHHHHHHHHHHHHHHHHHHX CS
      FliD_N 30 lewkqsayrelnsklsnlksalsals 55
                le k ++++ lns+l + + ++++l+
  KHJ30320.1 20 LELKGKIVSILNSDLGAGQRQVEELR 45
                55555555555555555555443331 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.083
                 XXXXXXXXXXXHHHHHHHHHHHHHHHHHH..............HHH....XX.GGGGGXEEEEECST.TTEEEE CS
      FliD_N  23 leqkktklewkqsayrelnsklsnlksal..............sal....sk.sstfsakkatssde.svvtat 76 
                  ++k +++e+  +++++lns ls+++                 s+l    ++ +++f+ak  ++s++ +v+ta+
  KHJ30320.1  62 TNKKTQQIEACLNDINDLNSRLSQMILHRstdndnisflndkiSSLqsevNTlQTSFNAKGISTSQTsNVATAK 135
                 45666677777777777777777777644444444444443331113333444788888888888777888876 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.27
                 XXXXXXXXXXXXXXXXXHHHHHHHHHHHH CS
      FliD_N  17 rakldkleqkktklewkqsayrelnskls 45 
                 r+ ldk+  ++++ e++q+ y++ ++++ 
  KHJ30320.1 140 RSDLDKYSGAQKDAEKRQTMYESWKTQVH 168
                 567999*****************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1997  (0.111384); expected 358.6 (0.02)
Passed bias filter:                      815  (0.0454571); expected 358.6 (0.02)
Passed Vit filter:                       136  (0.00758548); expected 17.9 (0.001)
Passed Fwd filter:                        45  (0.0025099); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              35  [number of targets reported over threshold]
# CPU time: 0.76u 0.31s 00:00:01.07 Elapsed: 00:00:00.45
# Mc/sec: 1632.12
//
Query:       KHJ30321.1  [L=407]
Description: putative nad-binding domain 4 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-36  124.8   0.0      4e-36  124.5   0.0    1.1  1  NAD_binding_4    Male sterility protein
    5.6e-07   29.3   0.0    2.8e-06   27.0   0.0    1.9  2  Epimerase        NAD dependent epimerase/dehydratase family
     0.0011   18.2   0.0     0.0017   17.6   0.0    1.2  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
  ------ inclusion threshold ------
      0.027   13.5   0.0      0.046   12.7   0.0    1.4  1  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
        0.2   11.6   0.0       0.35   10.8   0.0    1.5  1  KR               KR domain


Domain annotation for each model (and alignments):
>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.5   0.0   1.1e-39     4e-36       1     256 [.      39     290 ..      39     291 .. 0.82

  Alignments for each domain:
  == domain 1  score: 124.5 bits;  conditional E-value: 1.1e-39
                    EE-TTSHHHHHHHHHHHHHS-.TEEEEEE-SSSHHHHHHHHHHHT-SS-HHHHHHHHHTTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--S CS
  NAD_binding_4   1 lTGaTGFLGkvLlekLLrttpevkiyllvRaksgesaeeRleeelekkelfsallkelaerikvveGDlseprlGLseedlqelaeevdviihsaA 96 
                    lTG+TG LG ++l kL+ +    k+y+l+R   +   ++R  ++ + ++ ++ l+   + r++ veGD+ ++++G++ +++ +    ++++i+ aA
     KHJ30321.1  39 LTGGTGGLGGCMLYKLILKLHTKKVYVLCRDIAK---AHRTWANSMPNQYQKILN---SGRVVLVEGDILKKNFGVDVSQILD----TTIVINAAA 124
                    8**************98665555*******9966...778867777777777776...9*****************9887765....59******* PP

                    S-S.STTSSEEHHHHHHHHHHHHHHHTSSS--.-EEEEEEGGGTTS-T.TT--SSS-H......HHH--EEEETTTCCCHHHHHHHHHHHHHHHHH CS
  NAD_binding_4  97 tvnfdepykellrvNveGtrevlelakklkklkvllhvSTayvngere.geveekvyeegekeekldederaklkglpntYeqsKalaEklvrear 191
                    +++f ++++++++ N +   e+ ++a++l +lk++++vSTay+n     g veek+y+ g+ ee+l  +++a+ +++p  Y +sK+l E+l+ + +
     KHJ30321.1 125 DISFAQELDDAIKKNCLPPLELAQMASQLPNLKCFIQVSTAYCNSFLPdGLVEEKIYPLGDPEEEL--QTKANADKFPWSYAYSKHLMEQLLFSRN 218
                    ********************************************9865156788899866655544..556667778889**************99 PP

                    HHH---EEEEEE-EEE-........-SSST---TTSHHHHHHHHHHHH-EEES-SB---TT..--EEEHHHHHHH CS
  NAD_binding_4 192 rrsglpvvivRpsiitg........esktGwingsdlgirgllgliakgvlpeilgdkeav..ldlvpvDyvana 256
                       +lp++ivRp+ii +            G++   +  ++++ ++ + +v+  + g++ ++  +d vpvD+van 
     KHJ30321.1 219 --PNLPILIVRPTIIGTavhqpyplYGPMGSTPLES-FFKFFTISPGNRVFHATDGSDTGTniFDEVPVDWVANL 290
                    ..89****************8844433334444444.66666666666666666666555588**********96 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   7.9e-10   2.8e-06       2     170 ..      38     229 ..      37     234 .. 0.74
   2 ?   -0.6   0.0      0.21   7.4e+02      64      86 ..     298     320 ..     255     335 .. 0.60

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 7.9e-10
                 EEETTTSHHHHHHHHHHHHCT.SE.EEEEES-STTTTCHHCHHC.............EEEE--TT-HHHHHHHHHHHT-SEEEE--S.---HHHHHHSH CS
   Epimerase   2 lVtGatGfiGsalvkallekg.ye.vigldrlssasntarledl.............elveldltdrsalerlfkeeqpdavihlAa.vggvaassedp 84 
                 ++tG+tG +G  ++ +l  k   + v +l r+  + ++   +                lve+d+++++   ++ +  + ++vi++Aa ++  ++     
  KHJ30321.1  38 FLTGGTGGLGGCMLYKLILKLhTKkVYVLCRDIAKAHRTWANSMpnqyqkilnsgrvVLVEGDILKKNFGVDVSQILDTTIVINAAAdISFAQE----L 132
                 689999877766555554444233588888887777766666668899********************88888888889******995554444....5 PP

                 HHHHHHHTHHHHHHHHHHHHH.TCTEEEEEEEGGGGT.........SCSSS.S...BSTCSTTS--..--SSHHHHHHHHHHHHHHHHHHHHT-EEEEE CS
   Epimerase  85 adfieknlqgtlnlleaarka.gvkrllflsSsevYG.........kdaeq.p...keettltgpl..kpnspYaaaKlageklveayaaqyglnaiil 167
                  d i+kn+   l+l+++a++  ++k ++++s++             k   + p    ee+++t+    k  + Ya++K+++e+l+ +  +  +l+++i+
  KHJ30321.1 133 DDAIKKNCLPPLELAQMASQLpNLKCFIQVSTAYCNSflpdglveeK---IyPlgdPEEELQTKANadKFPWSYAYSKHLMEQLLFS--RNPNLPILIV 226
                 66899**************999**********655545556654330...3345543333333333358899************986..5667899999 PP

                 EES CS
   Epimerase 168 rlf 170
                 r++
  KHJ30321.1 227 RPT 229
                 986 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.21
                 T-SEEEE--S---HHHHHHSHHH CS
   Epimerase  64 qpdavihlAavggvaassedpad 86 
                 +   ++h++ ++ ++++ +d  +
  KHJ30321.1 298 GTRGIVHAGSESYIPRTLDDMLR 320
                 33344455445555555555544 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   4.7e-07    0.0017       1     128 [.      37     164 ..      37     167 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 4.7e-07
                      EEEETTTSHHHHHHH.HHHHHHB-SEEEEEES-HHHHHHHHHH......-TTE.EEE....E--TT-HHHHHHHTT..T-SEEEE------HHH CS
  Polysacc_synt_2   1 vlvtGagGsiGselv.rqilkkkpkkiillerdElklyeiekeleeelkkkkl.kveivpvigdvrdkerlekaleelkvdvvfhaAAlKhVPl 92 
                      v++tG++G +G  ++ + ilk + kk+++l rd  k ++   +   ++ +k l + ++v v gd+ +k+   ++ + l+  +v++aAA   +  
       KHJ30321.1  37 VFLTGGTGGLGGCMLyKLILKLHTKKVYVLCRDIAKAHRTWANSMPNQYQKILnSGRVVLVEGDILKKNFGVDVSQILDTTIVINAAAD--IS- 127
                      689*******987651667888**********999988877774444444444144666777*******9999999999*********6..43. PP

                      HHHSHHHHHHHHHHHHHHHHHHHHHT.T-SEEEEEEE CS
  Polysacc_synt_2  93 veenpleaiktNvlgtenvieaaiea.gvkkvvliSt 128
                        ++  +aik N l   +++++a +  + k ++ +St
       KHJ30321.1 128 FAQELDDAIKKNCLPPLELAQMASQLpNLKCFIQVST 164
                      4567899**************9988648999****99 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.3e-05     0.046       2     162 ..      39     219 ..      38     297 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.3e-05
   3Beta_HSD   2 vtGgaGFlGralvkeLvrleelkevrvlD..........lrespelleelskvnvkkviegDvtdkdkleealegvdvvihlaslvdvagkltedeimk 90 
                 +tGg+G lG  +  +L+   + k+v vl            +  p+  +++ ++++  ++egD+++k+   ++ +  d  i++ ++ d+   ++ d   k
  KHJ30321.1  39 LTGGTGGLGGCMLYKLILKLHTKKVYVLCrdiakahrtwANSMPNQYQKILNSGRVVLVEGDILKKNFGVDVSQILDTTIVINAAADISFAQELDDAIK 137
                 69****9999999888887778998887544765555444444555566666666669***************************99998887777777 PP

   3Beta_HSD  91 vnvkGTrnvleacvka.gvrvlvYtSsa..evvgpn.slgeeil...ngdEeleyesl...hqdaypesKalaEklvlkaNg 162
                  n     ++ +++ +  +++ ++ +S+a  +   p+   +e+i    + +Eel+ + +   +   y++sK+l E+l+ + N 
  KHJ30321.1 138 KNCLPPLELAQMASQLpNLKCFIQVSTAycNSFLPDgLVEEKIYplgDPEEELQTKANadkFPWSYAYSKHLMEQLLFSRNP 219
                 7777777777777664378999999987333333431334444321155566665554555777899999999999888875 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   9.8e-05      0.35       3      64 ..      37     103 ..      35     138 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 9.8e-05
                 EEEETTTSHHHHHHHHHHH.HHHS-EEEEE-SS....--HHHHHHHHHHHHTT-...EEEE----TT- CS
          KR   3 ylitGGlGgLGlelarwla.ekgarhlvllsRsa..aadedskaliaelealga...evevvaaDvsd 64 
                 +++tGG+GgLG  +   l+ + + +++ +l R+   a +  ++++ ++ ++      +v +v+ D+ +
  KHJ30321.1  37 VFLTGGTGGLGGCMLYKLIlKLHTKKVYVLCRDIakAHRTWANSMPNQYQKI-LnsgRVVLVEGDILK 103
                 679*******98877666516679********94222222222222233332.023366666767655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 2878.10
//
Query:       KHJ30322.1  [L=299]
Description: putative protein transport protein sec-13 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.2e-21   75.2  28.4    1.8e-05   25.4   0.1    7.5  6  WD40          WD domain, G-beta repeat
    5.1e-11   42.7   5.7    4.3e-05   23.7   0.0    4.0  4  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
    2.2e-05   24.5   6.7       0.95    9.4   6.7    3.0  1  TFIIIC_delta  Transcription factor IIIC subunit delta N-term


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.7e-06     0.016       5      37 ..       5      38 ..       2      39 .. 0.87
   2 !   25.4   0.1   3.1e-09   1.8e-05       5      37 ..      49      84 ..      46      85 .. 0.88
   3 !    5.6   0.2    0.0052        31      11      35 ..     102     128 ..      92     129 .. 0.64
   4 !   11.0   2.9   0.00011      0.65       6      38 .]     141     189 ..     138     189 .. 0.66
   5 !   21.4   0.3   5.4e-08   0.00032       7      37 ..     204     238 ..     198     239 .. 0.82
   6 !    8.2   0.7   0.00081       4.9      13      38 .]     258     284 ..     249     284 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.7e-06
                EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  5 rtltGHss.vtslafspdgawlasGsdDgtvriW 37
                 t +GH++ +++   + +g+ la++s D+t++i+
  KHJ30322.1  5 ITNSGHDDmIHDAVLDYYGRRLATCSSDKTIKIF 38
                5668**7789*999***********88*****97 PP

  == domain 2  score: 25.4 bits;  conditional E-value: 3.1e-09
                EEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEE CS
        WD40  5 rtltGH.ssvtsla..fspdgawlasGsdDgtvriW 37
                 tl+GH + v++++   +++g+ las+++Dg+v iW
  KHJ30322.1 49 ETLRGHeGAVWCVSwaHPKYGNILASAGYDGKVLIW 84
                689***888****9999999999**9999******* PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.0052
                 SSEEEEE..EETTSSEEEEEETTSEEE CS
        WD40  11 ssvtsla..fspdgawlasGsdDgtvr 35 
                  sv+ ++   + +g +la++s Dg+v 
  KHJ30322.1 102 ASVNIISwsPHESGCLLACASSDGNVS 128
                 4455454224555555888777**996 PP

  == domain 4  score: 11.0 bits;  conditional E-value: 0.00011
                 EEESSSS..EEEEE...EETTSSE...............EEEEETTSEEEEEE CS
        WD40   6 tltGHss..vtsla...fspdgaw...............lasGsdDgtvriWd 38 
                 ++ +H +  v+s++       ++                +++G+ D+ +r+W+
  KHJ30322.1 141 IFHAH-GigVNSVSwapS---SSPgslisssggqgsikrFVTGGSDNMLRLWN 189
                 67788.44699**74442...333555566666667666566766*******8 PP

  == domain 5  score: 21.4 bits;  conditional E-value: 5.4e-08
                 EESS.SSEEEEEEETTSSE.........EEEEETTSEEEEE CS
        WD40   7 ltGH.ssvtslafspdgaw.........lasGsdDgtvriW 37 
                 l GH ++v+++      aw         +as+s D+tvriW
  KHJ30322.1 204 LQGHtDWVRDV------AWsptilqksyIASASQDKTVRIW 238
                 78**777****......666666668889************ PP

  == domain 6  score: 8.2 bits;  conditional E-value: 0.00081
                 E.EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 v.tslafspdgawlasGsdDgtvriWd 38 
                 v + +++s +g+ la +  D+++ +W+
  KHJ30322.1 258 VlWRVSWSLSGNVLAISANDNKISLWK 284
                 358999********97777*******6 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0    0.0011       6.6      38      90 ..      11      64 ..       2      66 .. 0.74
   2 !   23.7   0.0   7.1e-09   4.3e-05       9      90 ..      71     155 ..      67     157 .. 0.87
   3 ?    1.0   0.0     0.087   5.2e+02      36      65 ..     206     238 ..     183     245 .. 0.76
   4 !   11.5   0.6   4.6e-05      0.28      10      65 ..     226     283 ..     214     287 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0011
  ANAPC4_WD40 38 dsevrsLaWkpdgklLavaysdgevrlldae..sgkvvhslsvksekavtclgWg 90
                 d  +++      g+ La   sd +++++++   s ++ ++l+ ++  av c++W+
   KHJ30322.1 11 DDMIHDAVLDYYGRRLATCSSDKTIKIFEVDgdSHRLTETLRGHEG-AVWCVSWA 64
                 55555555666799*************9986225666777777766.7******7 PP

  == domain 2  score: 23.7 bits;  conditional E-value: 7.1e-09
  ANAPC4_WD40   9 LiAlatedgellvfRl...ngqrvwtleedkedsevrsLaWkp..dgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  ++A a  dg++l+ R    ++ r++++  + +  +v+ ++W+p  +g lLa a sdg+v++l+ ++  + h++  ++   v++++W+
   KHJ30322.1  71 ILASAGYDGKVLIWREqgaSWTRIFDF--ALHTASVNIISWSPheSGCLLACASSDGNVSVLEFKDNAMDHKIFHAHGIGVNSVSWA 155
                  6888999999***99744478******..7899999999998722578************************998888899999996 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.087
  ANAPC4_WD40  36 kedsevrsLaWkp...dgklLavaysdgevrll 65 
                  ++   vr++aW+p   + + +a a +d +vr+ 
   KHJ30322.1 206 GHTDWVRDVAWSPtilQKSYIASASQDKTVRIW 238
                  556679999999844457889999999999986 PP

  == domain 4  score: 11.5 bits;  conditional E-value: 4.6e-05
  ANAPC4_WD40  10 iAlatedgellvfRl..ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrll 65 
                  iA a++d+ +++     +   vw+ +  + d     ++W+ +g++La++ +d++++l 
   KHJ30322.1 226 IASASQDKTVRIWTNdpSQPGVWNSKVIQFDVVLWRVSWSLSGNVLAISANDNKISLW 283
                  5666666655554441134557777666777777799******************986 PP

>> TFIIIC_delta  Transcription factor IIIC subunit delta N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   6.7   0.00016      0.95     101     133 ..     107     135 ..      27     296 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00016
  TFIIIC_delta 101 aaWSPlgLsknrrClLavLtttgeLsiyeasgn 133
                   ++WSP+     + ClLa+ +++g++s++e ++n
    KHJ30322.1 107 ISWSPHE----SGCLLACASSDGNVSVLEFKDN 135
                   5566654....5666666666666655554333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       360  (0.0200792); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2120.37
//
Query:       KHJ30323.1  [L=315]
Description: putative peroxin 20 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.11   12.7   0.5       0.11   12.7   0.5    2.4  3  CTK3_C    CTD kinase subunit gamma CTK3 C-terminus


Domain annotation for each model (and alignments):
>> CTK3_C  CTD kinase subunit gamma CTK3 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.43   7.6e+03      37      46 ..      52      61 ..      31      69 .. 0.66
   2 ?   -2.3   0.2      0.29   5.3e+03      45      48 ..     139     142 ..     107     158 .. 0.58
   3 ?   12.7   0.5     6e-06      0.11      20      58 ..     171     210 ..     169     217 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.43
      CTK3_C 37 eaEfenlWee 46
                e+Efe+  ++
  KHJ30323.1 52 ESEFETFQNN 61
                6666666555 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.29
      CTK3_C  45 eets 48 
                 +e+s
  KHJ30323.1 139 NEIS 142
                 3333 PP

  == domain 3  score: 12.7 bits;  conditional E-value: 6e-06
      CTK3_C  20 rEniWvvprsk.ekslateaEfenlWeetsdlneddeeea 58 
                 r + W++p+++ ++++++e+Efe+++e +++++ +  ee 
  KHJ30323.1 171 RHQNWLQPEQThHEEILNEQEFEQAFELIDEFERKALEEI 210
                 7799******96667************9999887766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1275  (0.0711138); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2483.60
//
Query:       KHJ30324.1  [L=66]
Description: hypothetical protein EV44_g3443 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.097   11.3   0.1      0.097   11.3   0.1    1.0  1  Herpes_LAMP2  Herpesvirus Latent membrane protein 2


Domain annotation for each model (and alignments):
>> Herpes_LAMP2  Herpesvirus Latent membrane protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   5.4e-06     0.097     280     310 ..       4      34 ..       1      46 [. 0.91

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.4e-06
  Herpes_LAMP2 280 lillyclyvwqsfnkaslvtGilflilawsh 310
                    ++l+c++++  ++  +l+ G+   ++ w+ 
    KHJ30324.1   4 RVYLWCVWIYSEYHDEALIEGFQKDFAEWTS 34 
                   689**************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       305  (0.0170115); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.32u 0.22s 00:00:00.54 Elapsed: 00:00:00.35
# Mc/sec: 566.07
//
Query:       KHJ30325.1  [L=244]
Description: hypothetical protein EV44_g3205 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.2e-18   64.2   0.5    1.4e-17   63.7   0.5    1.3  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.7   0.5   7.6e-22   1.4e-17       1     135 [.      74     220 ..      74     223 .. 0.96

  Alignments for each domain:
  == domain 1  score: 63.7 bits;  conditional E-value: 7.6e-22
  Retrotran_gag_2   1 wkkkdakalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsa........... 83 
                      w+  ++  ++++v+++++ l + v +  tak++W ++k+ y ++++a+ l l+++l++lk++e+++vadh++ +++++++L +           
       KHJ30325.1  74 WNYANKLLRGYLVSAVDKTLRNMVTTQLTAKDAWFNIKARYDRETPATTLSLLRNLVDLKLEENGNVADHLTIFTNTWDRLYQrslsstsnvak 167
                      77889999************************************************************************************** PP

  Retrotran_gag_2  84 ..lgvkiddedkvvllLasLPesyetfvtaiesseedltleevieklleeeerr 135
                         +v+ +de k + lL sLP++ + +++++ + ++ +++++++ kll+ +  r
       KHJ30325.1 168 afRDVTSSDEVKGAFLLLSLPKNMDYIIDNLAT-KDLIKFQDIQPKLLDLSADR 220
                      *99****************************99.9************9877666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.20s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 2066.36
//
Query:       KHJ30326.1  [L=256]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.17   12.1   8.6       0.94    9.7   0.8    2.7  2  zf-CCHC   Zinc knuckle
       0.51   10.7   4.2         16    5.9   0.9    2.3  2  eIF3g     Eukaryotic translation initiation factor 3 subunit 


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.8   0.00011      0.94       2      17 ..     147     162 ..     146     163 .. 0.91
   2 ?    5.7   1.6    0.0019        17       2       9 ..     166     173 ..     166     173 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00011
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +C +CG+++H+  +C+
  KHJ30326.1 147 ACGRCGSIMHLEEECK 162
                 7999***********7 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0019
                 CTSSSSSS CS
     zf-CCHC   2 kCynCGep 9  
                 kC+nCG+p
  KHJ30326.1 166 KCRNCGGP 173
                 7*****86 PP

>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.1    0.0019        17      97     119 ..     121     142 ..      97     146 .. 0.81
   2 ?    5.9   0.9    0.0018        16     101     115 ..     161     175 ..     153     186 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0019
       eIF3g  97 lkkkekklvkCriCkgdHfTskC 119
                 lk  +++ ++C+ C g H T +C
  KHJ30326.1 121 LKP-RQSKLNCKRCLGFHSTGCC 142
                 443.34559*************9 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0018
       eIF3g 101 ekklvkCriCkgdHf 115
                  k l kCr+C+g H 
  KHJ30326.1 161 CKALTKCRNCGGPHR 175
                 45679*********5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       734  (0.0409393); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1883.61
//
Query:       KHJ30327.1  [L=192]
Description: putative rnase p rpr2 rpp21 snm1 subunit domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.9e-14   52.7   1.6    3.9e-14   52.7   1.6    1.8  2  Rpr2           RNAse P Rpr2/Rpp21/SNM1 subunit domain
     0.0075   16.3   2.5      0.017   15.1   2.5    1.7  1  Cytochrome_C7  Cytochrome c7 and related cytochrome c
  ------ inclusion threshold ------
      0.028   13.2   1.9      0.033   13.0   1.9    1.0  1  O-antigen_lig  O-antigen ligase like membrane protein
       0.15   12.4   1.2       0.26   11.6   0.9    1.6  1  NLRC4_HD       NLRC4 helical domain
       0.77    9.7  10.6        2.2    8.3  10.6    1.7  1  FAM60A         Protein Family FAM60A


Domain annotation for each model (and alignments):
>> Rpr2  RNAse P Rpr2/Rpp21/SNM1 subunit domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.7   1.6   1.1e-17   3.9e-14       1      90 []       9     105 ..       9     105 .. 0.85
   2 ?   -1.4   0.1       0.8   2.9e+03      16      16 ..     149     149 ..     110     175 .. 0.60

  Alignments for each domain:
  == domain 1  score: 52.7 bits;  conditional E-value: 1.1e-17
                 HHHHHHHHHH.HHHHH-HHHHHHHHHHHHHHHHHCT---SSTCCCTB-TTT--B--CTTTEEEEEE-SSS-E.................EEEEETTTT CS
        Rpr2   1 rlnfLyqaahlqlaeaspalsrylakqlrevskkaqlrlppsvkrtvCkkCgsvlipgvtcsvrvenkskkkkkkkkka........dvlvvtClaCg 90 
                 r++fL ++ahl l + +p++sryl+ + ++++ ++++ l ++  +++C++Cg+++i g++ s++  +  +++kkkk+k+          l+++C++C+
  KHJ30327.1   9 RISFLNDSAHL-LFACAPETSRYLMMKRNKLAFDNNIDLAETRMSKTCNACGTMMIIGWQGSISNVSGISNEKKKKRKKvadkkqqpRLLIYECNTCH 105
                 89*********.**************************************************99955444444444444455666777788******6 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.8
                 H CS
        Rpr2  16 a 16 
                 +
  KHJ30327.1 149 S 149
                 2 PP

>> Cytochrome_C7  Cytochrome c7 and related cytochrome c
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   2.5   4.9e-06     0.017      12      60 ..      51     111 ..      38     144 .. 0.61

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 4.9e-06
  Cytochrome_C7  12 tgykCtdCHskl.f...eskak.......kk.maemekgkskkaeveslt.......CgaCHdgknaf 60 
                     +++C++C + + +       +       ++ ++++ k+ ++k++    +       C +CH+++++ 
     KHJ30327.1  51 MSKTCNACGTMMiIgwqG---SisnvsgiSNeKKKKRKKVADKKQ----QprlliyeCNTCHRKTRQI 111
                    468999999998445321...133443332122222223333333....13345678*****998874 PP

>> O-antigen_lig  O-antigen ligase like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   1.9   9.1e-06     0.033     236     364 ..      32     186 ..      20     191 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 9.1e-06
  O-antigen_lig 236 ilkkkklkkkkl...........llaiillvligillaiypyspiyrrkelkekeieiksekk.............eeeeikneikenykseglke 307
                    ++k++kl   +            ++a  ++++ig   +i ++s i ++k+ k k+ + k+++              + +++  ++k    +++lk 
     KHJ30327.1  32 MMKRNKLAFDNNidlaetrmsktCNACGTMMIIGWQGSISNVSGISNEKKKKRKKVADKKQQPrlliyecntchrkTRQILSTNLKTLQDRRSLKM 127
                    5566666555545666666777789999999999999**********9999999999877777899999988888655555555666666666665 PP

  O-antigen_lig 308 avleqyeyandkqfsqe..llkeeveslllsnRdlqlkvlkqvyk.nadisekLfGigYs 364
                    + l+ ++++n+ +  ++  +l+ ++ s +  +R+ +++ l+ +++ ++d++   fG+  +
     KHJ30327.1 128 TQLKLESFKNNSEAESKpqNLSTPTLSTR-KRRKTKKITLETLIEqKKDPQPSSFGFDLM 186
                    55555555555554444003444555555.566667777788888788888899998766 PP

>> NLRC4_HD  NLRC4 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.9   7.4e-05      0.26      26      79 ..      96     148 ..      90     171 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 7.4e-05
                 HHHHCCC--TTCHHHHHHHHHHTTSSSTHHCHCHT--SGGCCHCHHHHHHH.HH CS
    NLRC4_HD  26 lLlYtcgsstkAgpkivshLlalvdekeslenlsendeylkhtpelellkaili 79 
                 lL Y c +    +++i+s  l++++++ sl+ ++ + e+ k+++e e + + ++
  KHJ30327.1  96 LLIYECNTCHRKTRQILSTNLKTLQDRRSLKMTQLKLESFKNNSEAESKPQ-NL 148
                 899*******************************9999****999999888.54 PP

>> FAM60A  Protein Family FAM60A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3  10.6    0.0006       2.2      24     174 ..      27     182 ..      23     192 .] 0.56

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0006
      FAM60A  24 ssRftdskkYekefekCfkleekRsGeiCnaC.vLLvkRwk.......kLPagskrnWkhvvdaragpglkslaklkkkekkesskkieekfekklkkk 114
                  sR+   k+    f +  +l+e+R    CnaC  +++  w+        + ++ k++ k v d +  p l   +    +   +++++i ++  k+l+ +
  KHJ30327.1  27 TSRYLMMKRNKLAFDNNIDLAETRMSKTCNACgTMMIIGWQgsisnvsGISNEKKKKRKKVADKKQQPRLLIYECNTCH---RKTRQILSTNLKTLQDR 122
                 5899999999999*******************55677788622221113556667777777777777776533222222...23455555666666777 PP

      FAM60A 115 kklkktkakasdasssereaspassdsasedsdesedeeekkrkkllekkkkrsaeklvs 174
                 + lk t+ k ++ +++++++s  ++ s+ + s +++ +++k + ++l ++kk  +++++ 
  KHJ30327.1 123 RSLKMTQLKLESFKNNSEAESKPQNLSTPTLSTRKRRKTKKITLETLIEQKKDPQPSSFG 182
                 766666666655544444444333333333333333333333334444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1639  (0.0914161); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1368.10
//
Query:       KHJ30328.1  [L=509]
Description: putative coenzyme a transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-98  328.7   1.6    2.1e-59  200.6   0.0    2.0  2  CoA_trans        Coenzyme A transferase
    0.00017   21.5   0.1    0.00039   20.4   0.1    1.5  1  AcetylCoA_hyd_C  Acetyl-CoA hydrolase/transferase C-terminal 


Domain annotation for each model (and alignments):
>> CoA_trans  Coenzyme A transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.6   0.0   2.3e-63   2.1e-59       2     216 ..      35     263 ..      34     264 .. 0.98
   2 !  127.2   0.8   6.5e-41   5.8e-37       2     216 ..     296     493 ..     295     494 .. 0.95

  Alignments for each domain:
  == domain 1  score: 200.6 bits;  conditional E-value: 2.3e-63
                 CHHHHHHCTT--TTEEEEE-SBTTBTHHHHHHHHHHHHT.TTSEEEEESTTTE..ECCHHHHHTTTEEEEEESCTTBBCEHHHHHHHHTTSSEEEEHHH CS
   CoA_trans   2 etaaeavakeikdGmtvavGGFgligiPealiaalarsg.vkdltviiseagv..lglgplllngsvkkviasyggetvnprfgkqflsgelefellpq 97 
                  +aa+a++ ++k+++t++ GGFgl+g P++li+++a++  +++ tv++++ag+  +glg+ll++++++k+iasy+ge  n +f++ +l ge+e+el+pq
  KHJ30328.1  35 SSAADAIK-DLKSNSTILCGGFGLCGVPNTLIDEVAKRPdINGITVVSNNAGTddSGLGKLLKTKQIRKMIASYIGE--NDTFERMYLTGEIELELTPQ 130
                 5899***9.***************************9877*************************************..******************** PP

                 HHHHHHHHHHHHTEETTEEEESTTTTSHGGTT.................ESEEEEETTEEEEEEESSSEEEEEEECCEEETTCSEESSGGGHTTHSHHH CS
   CoA_trans  98 gtlaerlraGgaglpelgfltntgigtlvapk.................lkkvpgfgGaeyilepalkadvalikaskadeegnlvfeksagnfnkpai 179
                 gtlaer+  Gg g+p  +f+t+  +gt+v+ +                 +k+v+ f+G++y+le+++k d+al+ka+kad+ gn +f+ +  nfn+ + 
  KHJ30328.1 131 GTLAERCASGGRGIP--AFYTPAAVGTVVQAGelplsynhdsiplkysvPKEVRIFDGRPYLLEESIKGDYALVKAWKADRLGNCQFRLAGNNFNGVMG 227
                 ***************..********************************99********************************************8888 PP

                 HHHEEEEEEEEEEEECTTSSECCCESBTGGGHSEEEE CS
   CoA_trans 180 aeaakvtileveeivekgkldpekvliPgvlvdavve 216
                 + +a+ ti+e e+iv  g+++pe ++ Pg++v ++++
  KHJ30328.1 228 R-NANKTIVEAENIVMPGEISPEYIHLPGIYVARIIQ 263
                 8.99******************************986 PP

  == domain 2  score: 127.2 bits;  conditional E-value: 6.5e-41
                 CHHHHHHCTT--TTEEEEE-SBTTBTHHHHHHHHHHHHTTTSEEEEESTTTEECCHHHHHTTTEEEEEESCTTBBCEHHHHHHHHTTSSEEEEHHHHHH CS
   CoA_trans   2 etaaeavakeikdGmtvavGGFgligiPealiaalarsgvkdltviiseagvlglgplllngsvkkviasyggetvnprfgkqflsgelefellpqgtl 100
                 e++  ++ake+k+Gm+ ++G    ig+P  l+ a +++    ++ ++se+gvlglgp+++ g+++++i+++g+etv+ ++g++++++e++f  +++ ++
  KHJ30328.1 296 ERIVRRAAKEFKNGMYANLG----IGMP-MLAPAFIEQ--GIDVQLQSENGVLGLGPYPKRGEEDADIINAGKETVTLNVGASVFGSEESFG-MIRSGR 386
                 567789999***********....****.9********..88999***********************************************.****** PP

                 HHHHHHHHHTEETTEEEESTTTTSHGGTTESEEEEETTEEEEEE.ESSSEEEEEEECCEEETTCSEESSGGGHTTHSHHHHHHEEEEEEEEEEEECTTS CS
   CoA_trans 101 aerlraGgaglpelgfltntgigtlvapklkkvpgfgGaeyile.palkadvalikaskadeegnlvfeksagnfnkpaiaeaakvtileveeivekgk 198
                 +  + +G+++++++g+l++++++     +  kv+gfgGa+++++ p+++++v++++++ +++  ++v ++  + ++k +++   ++t l+v+++    +
  KHJ30328.1 387 INLTILGAMQVSQKGDLASWMLP-----G--KVKGFGGAMDLVSnPSKTKVVVTMEHTDKKGNAKIVKQCDFPLTGKACVS--MIITELGVFDVN-ALS 475
                 ***********************.....5..7********9986267899**************************99999..99*********5.778 PP

                 SECCCESBTGGGHSEEEE CS
   CoA_trans 199 ldpekvliPgvlvdavve 216
                   ++k++ +gv+v+++++
  KHJ30328.1 476 GITLKEIADGVTVEEIKA 493
                 88999**********986 PP

>> AcetylCoA_hyd_C  Acetyl-CoA hydrolase/transferase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.1   4.3e-08   0.00039      37     130 ..     390     475 ..     376     485 .. 0.87

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 4.3e-08
                      EEEE-SEEETTS-EESSECTTCCTCGGTTHHHHHHHHHHSTT-EEEEE--SEETTTTEESEESS-STTSSECE-TTT-SEEEETTEEEE-TT-- CS
  AcetylCoA_hyd_C  37 sinsalevdltGqvnseslggrvvsGvGgqldFvrgaalskggksiialpStakkgeiSrIvpslkegahvtttrhdvdyvvTEyGiadLrgks 130
                      +i  a++v   G  +s +l g+ v G+Gg +d v++  +    k +++++ t kkg+ ++Iv +++      t ++ v++++TE G+ d++ +s
       KHJ30328.1 390 TILGAMQVSQKGDLASWMLPGK-VKGFGGAMDLVSNPSK---TKVVVTMEHTDKKGN-AKIVKQCD---FPLTGKACVSMIITELGVFDVNALS 475
                      6778999999999999999776.69***********998...99************9.9*******...88999*************9977654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       448  (0.0249875); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3619.25
//
Query:       KHJ30329.1  [L=787]
Description: putative gtpase binding protein rid1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-12   47.5   2.9    8.4e-11   41.8   2.9    2.6  1  Drf_GBD         Diaphanous GTPase-binding Domain
  ------ inclusion threshold ------
        7.6    6.4  10.8        1.1    9.1   1.6    3.0  3  HEPN_RiboL-PSP  RiboL-PSP-HEPN


Domain annotation for each model (and alignments):
>> Drf_GBD  Diaphanous GTPase-binding Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   2.9   9.4e-15   8.4e-11       5     144 ..     256     479 ..     252     494 .. 0.81

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 9.4e-15
     Drf_GBD   5 deeeidklFeelleelnlpeekreallalpiekKwqlvvqdkkkkakke.................................................. 53 
                 d++e++k+Fe +l+++n+p+++r +++ l ++ K+ ++ qd    a  e                                                  
  KHJ30329.1 256 DDDEVNKEFEAMLDRRNIPDHQRSKMRCLAMSMKKDFIKQDWAEIAAMEnrkriennnnldpnptlfgtndttgsktkrprsrtftlsknvginisnkn 354
                 89***************************************987777767999*******************************999666666666666 PP

     Drf_GBD  54 ..............................eklsksksksneeespesyvkklkddslke................................kqlesLr 90 
                                                                                                               l++Lr
  KHJ30329.1 355 pksevtviknlrkksseslnggvkifsgagA----------------------------ItaqnliakakgqtpddfvsymirvpkpekvevGRLHKLR 425
                 6666666666666666666666666666653............................04444444444444444444444444444666699***** PP

     Drf_GBD  91 VaLrtqplsWvkrFieleGlvaLlnvLskinekkaeeeedlkkeyeiikClKal 144
                   Lr++ + W  +Fi  +G+  ++ +L++  + + +ee++    +e++ ClK l
  KHJ30329.1 426 LLLRNETVAWTDNFIRQGGMEQIVGLLHRTMAIEWREEHEDALLHEVLLCLKGL 479
                 *****************************99999999999999*********88 PP

>> HEPN_RiboL-PSP  RiboL-PSP-HEPN
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   1.6   0.00013       1.1      62     157 ..     200     272 ..     178     279 .. 0.79
   2 ?    1.7   1.3     0.024   2.2e+02      85     114 ..     343     375 ..     289     396 .. 0.66
   3 ?   -3.1   0.0       0.7   6.3e+03       4      46 ..     671     706 ..     668     716 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00013
  HEPN_RiboL-PSP  62 leykklpekllikhllkssalklldwkkknpkkeiikelfklfgenisekinkafidtesnlkskvleeifkrlglekskkeskkkklnelvkrR 156
                     +  k  +e ++++++ ks   +++++ ++n+   +i+ ++++f+++ s+++n+   +t++ ++++     ++             k+++ +++rR
      KHJ30329.1 200 SGRKPNSERKVSTSTVKS---DKVEKSNRNYSQRVINAVSSSFSSKSSKILNS---QTDNFIDDDE----VN-------------KEFEAMLDRR 271
                     555666667777777777...78889999************************...7777777766....44.............7777777777 PP

  HEPN_RiboL-PSP 157 N 157
                     N
      KHJ30329.1 272 N 272
                     7 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.024
  HEPN_RiboL-PSP  85 ldw...kkknpkkeiikelfklfgenisekink 114
                      ++   + +n+++++  +++k++ ++ se++n 
      KHJ30329.1 343 SKNvgiNISNKNPKSEVTVIKNLRKKSSESLNG 375
                     222333555556666688888888888888887 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 0.7
  HEPN_RiboL-PSP   4 eerekelskllkeledssenpdkkdalrrsaivllyahlEgfv 46 
                     ++ +++++ +l +l+    +p+++++lr     +l++ +E+++
      KHJ30329.1 671 ASHLDLINGILASLS----SPEERNKLREQ---MLVSGWEKCM 706
                     445555555555555....77888888877...8888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (787 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       960  (0.0535445); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.25s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 5543.10
//
Query:       KHJ30330.1  [L=178]
Description: hypothetical protein EV44_g5468 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       252  (0.0140554); expected 358.6 (0.02)
Passed bias filter:                      232  (0.0129399); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 1272.61
//
Query:       KHJ30331.1  [L=235]
Description: hypothetical protein EV44_g3146 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1702.20
//
Query:       KHJ30332.1  [L=222]
Description: putative glycosyl transferase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-14   54.1   0.0    2.2e-14   53.6   0.0    1.2  1  Glyco_transf_8   Glycosyl transferase family 8
  ------ inclusion threshold ------
      0.011   15.1   0.0      0.027   13.8   0.1    1.5  2  Mannosyl_trans3  Mannosyltransferase putative
       0.02   14.9   0.1       0.32   11.0   0.0    2.0  2  Nucleotid_trans  Nucleotide-diphospho-sugar transferase


Domain annotation for each model (and alignments):
>> Glyco_transf_8  Glycosyl transferase family 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.0   3.7e-18   2.2e-14     101     255 ..       6     185 ..       2     186 .. 0.84

  Alignments for each domain:
  == domain 1  score: 53.6 bits;  conditional E-value: 3.7e-18
  Glyco_transf_8 101 pkldkilylDaDvvvqgdlseLwdldlk.gkvlaaved........................krfkkylnksepliaenfkpe.....acyFnaG 165
                      ++++++ lD+D +v ++++eL++++l+ ++v+ + +                         ++++   + ++pl a+ + p+     +++ n+G
      KHJ30332.1   6 TQYERVVLLDSDMLVLQNMDELIEMELDtPQVARMGQRvfaaghacicnplkkpqyprdwsrEKCAFSSQHDTPLTAQTTGPRtdtdlPNILNTG 100
                     79**************************8888888777************************77777777777777776666622222678**** PP

  Glyco_transf_8 166 vllfdldewrkenitetlikwlnlnekrtllklgdqdilnivfkgkvkeldkkynvlglgyeqskkskkeitenaaviHyiGpaKPWldi 255
                     +l++++     ++ ++ +i++l+ ++k  ++ +++q +l  +f+g++ +l+ +yn l +++ +  +s+    e ++ iHyi + KPW++i
      KHJ30332.1 101 LLVINPS----TSTFNYIIEFLRSDTK-LKVDFAEQSLLSELFHGRWVPLPYTYNALKTLRWRGVHSEIWRDECVKNIHYILTPKPWEEI 185
                     *****97....6778888999999999.7889*****************************4444444444567899**********987 PP

>> Mannosyl_trans3  Mannosyltransferase putative
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   4.5e-06     0.027      87     116 ..       2      31 ..       1      33 [. 0.89
   2 ?   -2.9   0.0      0.57   3.4e+03     175     193 ..      88     106 ..      61     114 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 4.5e-06
  Mannosyl_trans3  87 AllfssFeevllLDaDnvplknpdklFese 116
                      A  ++ +e+v+lLD+D ++l+n+d+l e e
       KHJ30332.1   2 AFGLTQYERVVLLDSDMLVLQNMDELIEME 31 
                      556789********************9976 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.57
  Mannosyl_trans3 175 lfgtipdhssesGlvvinK 193
                        +t + + + +Gl+vin 
       KHJ30332.1  88 RTDTDLPNILNTGLLVINP 106
                      4455666788899999985 PP

>> Nucleotid_trans  Nucleotide-diphospho-sugar transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1     0.033     2e+02      69      92 ..      11      33 ..       8      45 .. 0.87
   2 ?   11.0   0.0   5.3e-05      0.32     100     169 ..      85     154 ..      64     179 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.033
  Nucleotid_trans 69 vllsDvDvvWlrnpfpllkyedaD 92
                     v+l+D D+  l+n  +l+ +++ D
       KHJ30332.1 11 VVLLDSDMLVLQNMDELI-EMELD 33
                     89**************99.56655 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 5.3e-05
  Nucleotid_trans 100 ldgttadelknliNsGfffvrateatkallkkwaeelasesglw....DqdvfnlllregaakesglkvrvLdt 169
                        ++t+ +l n +N+G+ ++ ++++t   ++   e+l s+++l+    +q+ + +l +  +++ ++++  +L t
       KHJ30332.1  85 TGPRTDTDLPNILNTGLLVINPSTST---FNYIIEFLRSDTKLKvdfaEQSLLSELFHGRWVP-LPYTYNALKT 154
                      5567788899999*************...8888888888888878889********9999987.7777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       332  (0.0185175); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1708.23
//
Query:       KHJ30333.1  [L=649]
Description: putative peroxisomal targeting signal receptor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.1e-23   79.6   5.2    6.1e-08   32.2   0.0    6.0  7  TPR_1     Tetratricopeptide repeat
    2.3e-22   77.3   3.8    2.5e-06   27.2   0.1    5.9  5  TPR_2     Tetratricopeptide repeat
    5.8e-19   67.5   3.1    6.6e-08   32.1   0.0    5.6  5  TPR_11    TPR repeat
    1.1e-17   64.3   5.7      4e-05   24.2   0.1    4.3  4  TPR_16    Tetratricopeptide repeat
    9.8e-17   59.7   0.9    3.3e-06   26.9   0.0    5.0  4  TPR_8     Tetratricopeptide repeat
    1.4e-14   53.6   8.1    9.8e-05   22.9   0.5    5.0  4  TPR_14    Tetratricopeptide repeat
    2.8e-14   52.4   1.3      0.011   16.0   0.0    5.3  5  TPR_17    Tetratricopeptide repeat
    1.3e-13   51.2   6.5    0.00041   20.8   0.0    4.5  4  TPR_19    Tetratricopeptide repeat
    7.3e-13   48.6   2.2    1.5e-06   28.4   0.0    3.7  3  TPR_12    Tetratricopeptide repeat
      4e-10   39.0   2.2      0.016   15.2   0.0    5.6  5  TPR_7     Tetratricopeptide repeat
    6.9e-09   35.9   0.4      0.014   15.7   0.0    4.3  4  TPR_20    Tetratricopeptide repeat
    1.1e-08   35.0   2.1       0.01   16.0   0.0    3.5  3  TPR_9     Tetratricopeptide repeat
    1.1e-06   28.9   1.0        4.1    8.3   0.0    5.8  6  TPR_6     Tetratricopeptide repeat
    8.2e-06   26.0   1.0     0.0014   18.8   0.3    2.5  2  ANAPC3    Anaphase-promoting complex, cyclosome, subunit 3
     0.0015   17.8   0.3       0.84    8.8   0.1    2.3  2  TPR_15    Tetratricopeptide repeat
     0.0047   16.7   6.0      0.032   14.1   0.4    3.9  4  TPR_10    Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.013   15.5   0.0        8.6    6.5   0.1    3.0  2  TPR_3     Tetratricopeptide repeat
       0.13   12.2   0.2       0.24   11.3   0.2    1.4  1  DUF1641   Protein of unknown function (DUF1641)


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.22   2.1e+02      15      34 .]     332     351 ..     330     351 .. 0.91
   2 !   16.4   0.0   5.8e-06    0.0058       2      34 .]     353     385 ..     352     385 .. 0.95
   3 ?   -3.3   0.0        10   9.9e+03       3      15 ..     388     400 ..     388     400 .. 0.81
   4 ?   -3.1   0.0       8.5   8.5e+03      21      33 ..     446     458 ..     445     458 .. 0.88
   5 !   15.9   0.0   8.4e-06    0.0083       5      28 ..     468     491 ..     464     492 .. 0.90
   6 !   32.2   0.0   6.1e-11   6.1e-08       3      34 .]     508     539 ..     506     539 .. 0.96
   7 !   10.3   0.0   0.00051      0.51       2      22 ..     541     561 ..     540     564 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.22
                 T-HHHHHHHHHHHHHHSTTH CS
       TPR_1  15 gkydeAleyyekALelnPnn 34 
                 g++  A  ++e A++ +P++
  KHJ30333.1 332 GNLSLAALAFEAAIQKEPDH 351
                 78899999**********96 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 5.8e-06
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 +a+  lG a  +++k   A+ + e+AL+l+P n
  KHJ30333.1 353 DAWVMLGSAQAQNEKETPAIRALEQALKLDPAN 385
                 89*****************************65 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 10
                 HHHHHHHHHHHTT CS
       TPR_1   3 alynlGnayfklg 15 
                 al +l++ y + g
  KHJ30333.1 388 ALMGLAVSYTNEG 400
                 6889999998765 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 8.5
                 HHHHHHHHHHSTT CS
       TPR_1  21 leyyekALelnPn 33 
                 ++ y +A +l P+
  KHJ30333.1 446 IDLYIQAAQLSPD 458
                 78899****9997 PP

  == domain 5  score: 15.9 bits;  conditional E-value: 8.4e-06
                 HHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_1   5 ynlGnayfklgkydeAleyyekAL 28 
                  +lG++++  ++yd+A+++++ AL
  KHJ30333.1 468 VGLGVLFYGAEEYDKAVDCFSAAL 491
                 689*******************99 PP

  == domain 6  score: 32.2 bits;  conditional E-value: 6.1e-11
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPnn 34 
                  +++lG+++ + g+ +eA+++yekAL+++Pn+
  KHJ30333.1 508 LWNRLGATLANSGRSEEAIAAYEKALTIRPNF 539
                 6*****************************97 PP

  == domain 7  score: 10.3 bits;  conditional E-value: 0.00051
                 HHHHHHHHHHHHTT-HHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAle 22 
                 +a ynlG+ + + g ydeA  
  KHJ30333.1 541 RARYNLGVSCINIGCYDEAAS 561
                 799****************75 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1     0.035        35      15      34 .]     332     351 ..     330     351 .. 0.92
   2 !   16.2   0.0   8.4e-06    0.0084       2      34 .]     353     385 ..     352     385 .. 0.95
   3 !   13.1   0.0   7.8e-05     0.078       4      29 ..     467     492 ..     464     495 .. 0.89
   4 !   27.2   0.1   2.5e-09   2.5e-06       3      33 ..     508     538 ..     506     539 .. 0.95
   5 !   12.0   0.0   0.00018      0.18       2      29 ..     541     568 ..     540     571 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.035
       TPR_2  15 gdyeeAleafekAleldPnn 34 
                 g++  A+ afe+A++ +P++
  KHJ30333.1 332 GNLSLAALAFEAAIQKEPDH 351
                 88999*************97 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 8.4e-06
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                 +a+ +lG a +++ +   A++a+e+Al+ldP n
  KHJ30333.1 353 DAWVMLGSAQAQNEKETPAIRALEQALKLDPAN 385
                 79*****************************86 PP

  == domain 3  score: 13.1 bits;  conditional E-value: 7.8e-05
       TPR_2   4 lynlGlayyklgdyeeAleafekAle 29 
                    lG + y + +y++A+++f +Al+
  KHJ30333.1 467 QVGLGVLFYGAEEYDKAVDCFSAALA 492
                 5679********************97 PP

  == domain 4  score: 27.2 bits;  conditional E-value: 2.5e-09
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPn 33 
                 ++++lG  ++++g+ eeA++a+ekAl + Pn
  KHJ30333.1 508 LWNRLGATLANSGRSEEAIAAYEKALTIRPN 538
                 7*****************************9 PP

  == domain 5  score: 12.0 bits;  conditional E-value: 0.00018
       TPR_2   2 ealynlGlayyklgdyeeAleafekAle 29 
                 +a ynlG ++++ g y+eA+ ++  Al+
  KHJ30333.1 541 RARYNLGVSCINIGCYDEAASHLLGALA 568
                 578*******************988886 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00042      0.41       7      41 ..     331     365 ..     329     366 .. 0.93
   2 !   15.3   0.0   1.2e-05     0.012      13      39 ..     371     397 ..     369     400 .. 0.92
   3 ?    2.7   0.0       0.1     1e+02      14      39 ..     446     475 ..     446     477 .. 0.78
   4 ?    3.1   0.0     0.075        75       4      22 ..     474     492 ..     471     496 .. 0.83
   5 !   32.1   0.0   6.6e-11   6.6e-08       7      36 ..     519     548 ..     513     554 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00042
      TPR_11   7 qGkyeeAieaYkkAlkldPdnaeayynLGlayykq 41 
                  G++  A  a+++A++  Pd ++a+  LG a++++
  KHJ30333.1 331 GGNLSLAALAFEAAIQKEPDHVDAWVMLGSAQAQN 365
                 699999*************************9986 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 1.2e-05
      TPR_11  13 AieaYkkAlkldPdnaeayynLGlayy 39 
                 Ai a+++AlkldP n +a+ +L++ y 
  KHJ30333.1 371 AIRALEQALKLDPANLTALMGLAVSYT 397
                 9*********************99985 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.1
      TPR_11  14 ieaYkkAlkldPd....naeayynLGlayy 39 
                 i  Y +A +l+Pd    ++++  +LG+++y
  KHJ30333.1 446 IDLYIQAAQLSPDgehmDPDVQVGLGVLFY 475
                 567999999999866667888888888877 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.075
      TPR_11   4 yyeqGkyeeAieaYkkAlk 22 
                 +y   +y++A+ ++++Al+
  KHJ30333.1 474 FYGAEEYDKAVDCFSAALA 492
                 566679***********97 PP

  == domain 5  score: 32.1 bits;  conditional E-value: 6.6e-11
      TPR_11   7 qGkyeeAieaYkkAlkldPdnaeayynLGl 36 
                  G+ eeAi+aY+kAl ++P++++a ynLG+
  KHJ30333.1 519 SGRSEEAIAAYEKALTIRPNFVRARYNLGV 548
                 7999*************************7 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.3   7.6e-07   0.00075      10      54 ..     331     372 ..     326     374 .. 0.92
   2 !   14.7   0.1   3.6e-05     0.036      16      47 ..     371     399 ..     364     400 .. 0.91
   3 !    7.6   0.0     0.006         6       3      26 ..     470     493 ..     447     498 .. 0.59
   4 !   24.2   0.1     4e-08     4e-05       3      61 ..     512     567 ..     510     571 .. 0.92

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 7.6e-07
      TPR_16  10 agdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa 54 
                  g+   Aa a+eaa+ +    Pd+++A+  lg a +++   ++A+
  KHJ30333.1 331 GGNLSLAALAFEAAIQKE---PDHVDAWVMLGSAQAQNEKETPAI 372
                 689999************...****************99988888 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 3.6e-05
      TPR_16  16 AaaaleaalkrdpssPdaaeAllllgdaalrq 47 
                 A++ale+alk+d   P++  Al++l++++   
  KHJ30333.1 371 AIRALEQALKLD---PANLTALMGLAVSYTNE 399
                 99**********...************99765 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.006
      TPR_16   3 laraalragdyddAaaaleaalkr 26 
                 l+ +++ a +yd+A+  + aal++
  KHJ30333.1 470 LGVLFYGAEEYDKAVDCFSAALAS 493
                 344455555555555555555555 PP

  == domain 4  score: 24.2 bits;  conditional E-value: 4e-08
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraal 61 
                 l+  ++++g+ ++A+aa+e al  +   P  ++A+++lg+++   g ++eAa  ++ al
  KHJ30333.1 512 LGATLANSGRSEEAIAAYEKALTIR---PNFVRARYNLGVSCINIGCYDEAASHLLGAL 567
                 677899*******************...************************8888876 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   5.9e-07   0.00059       2      34 .]     353     385 ..     352     385 .. 0.96
   2 ?    2.9   0.0      0.16   1.6e+02       6      28 ..     469     491 ..     464     495 .. 0.84
   3 !   26.9   0.0   3.3e-09   3.3e-06       3      33 ..     508     538 ..     507     539 .. 0.96
   4 ?    4.4   0.0     0.054        54       2      28 ..     541     567 ..     540     569 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 5.9e-07
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 +a+++lgs+  + ++   A+ ++e+al+ldp+n
  KHJ30333.1 353 DAWVMLGSAQAQNEKETPAIRALEQALKLDPAN 385
                 79*****************************86 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.16
                 HHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyyekal 28 
                  lg +    ++y++A+ ++  al
  KHJ30333.1 469 GLGVLFYGAEEYDKAVDCFSAAL 491
                 6888888999*********9998 PP

  == domain 3  score: 26.9 bits;  conditional E-value: 3.3e-09
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ++++lg ++ + g+ eeA+++yekal+++p+
  KHJ30333.1 508 LWNRLGATLANSGRSEEAIAAYEKALTIRPN 538
                 59****************************8 PP

  == domain 4  score: 4.4 bits;  conditional E-value: 0.054
                 CHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekal 28 
                 +a ynlg  +++ g y+eA + +  al
  KHJ30333.1 541 RARYNLGVSCINIGCYDEAASHLLGAL 567
                 899****************98877666 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.1    0.0001       0.1      14      42 ..     331     359 ..     326     361 .. 0.90
   2 !   22.9   0.5   9.8e-08   9.8e-05       2      42 ..     353     393 ..     352     395 .. 0.96
   3 ?    4.3   0.0      0.09        90       6      29 ..     469     492 ..     464     497 .. 0.83
   4 !   22.7   0.0   1.1e-07   0.00011       3      42 ..     508     547 ..     506     549 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 0.0001
      TPR_14  14 lGdpdeAiallrralalaPddaeawllla 42 
                  G++  A+ ++++a+++ Pd+ +aw +l+
  KHJ30333.1 331 GGNLSLAALAFEAAIQKEPDHVDAWVMLG 359
                 588999999*******************8 PP

  == domain 2  score: 22.9 bits;  conditional E-value: 9.8e-08
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeawllla 42 
                 +a+ +l++a +++++   Ai++l++al+l+P++++a++ la
  KHJ30333.1 353 DAWVMLGSAQAQNEKETPAIRALEQALKLDPANLTALMGLA 393
                 79***********************************9998 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.09
      TPR_14   6 alaeallalGdpdeAiallrrala 29 
                  l+ +++ ++++d+A++++ +ala
  KHJ30333.1 469 GLGVLFYGAEEYDKAVDCFSAALA 492
                 5777888899************98 PP

  == domain 4  score: 22.7 bits;  conditional E-value: 1.1e-07
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawllla 42 
                 ++ +l++ l+++G+ +eAia++++al   P++ +a++ l+
  KHJ30333.1 508 LWNRLGATLANSGRSEEAIAAYEKALTIRPNFVRARYNLG 547
                 6889********************************9997 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   2.4e-05     0.024       2      27 ..     341     366 ..     340     372 .. 0.91
   2 !    6.9   0.1    0.0092       9.2       2      30 ..     375     404 ..     374     405 .. 0.88
   3 ?   -2.0   0.0       6.3   6.2e+03      13      32 ..     464     483 ..     448     485 .. 0.66
   4 !    8.6   0.1    0.0026       2.6      15      33 ..     508     526 ..     501     527 .. 0.93
   5 !   16.0   0.0   1.1e-05     0.011       1      32 [.     528     559 ..     528     560 .. 0.96

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.4e-05
      TPR_17   2 ylkaleldPnnadaynnLAelllknG 27 
                 ++ a++++P+++da+ +L+ ++++n 
  KHJ30333.1 341 FEAAIQKEPDHVDAWVMLGSAQAQNE 366
                 89*******************99886 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0092
      TPR_17   2 ylkaleldPnnadaynnLAelllknG.dlm 30 
                 +++al+ldP n  a+  LA+ + + G d+m
  KHJ30333.1 375 LEQALKLDPANLTALMGLAVSYTNEGyDTM 404
                 699*****************9999886666 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 6.3
      TPR_17  13 adaynnLAelllknGdlmtA 32 
                 +d+   L++l++ + ++++A
  KHJ30333.1 464 PDVQVGLGVLFYGAEEYDKA 483
                 67777788888888888887 PP

  == domain 4  score: 8.6 bits;  conditional E-value: 0.0026
      TPR_17  15 aynnLAelllknGdlmtAr 33 
                 ++n L+ +l++ G++++A+
  KHJ30333.1 508 LWNRLGATLANSGRSEEAI 526
                 7*****************8 PP

  == domain 5  score: 16.0 bits;  conditional E-value: 1.1e-05
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtA 32 
                 +y+kal + Pn + a +nL++   ++G +++A
  KHJ30333.1 528 AYEKALTIRPNFVRARYNLGVSCINIGCYDEA 559
                 5**************************99998 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.8   3.6e-05     0.035       5      56 ..     332     383 ..     330     383 .. 0.93
   2 !   12.2   0.5    0.0002      0.19      10      36 ..     371     397 ..     363     401 .. 0.90
   3 !   10.6   0.0   0.00064      0.64      11      55 ..     446     494 ..     438     500 .. 0.91
   4 !   20.8   0.0   4.2e-07   0.00041       4      48 ..     519     563 ..     516     571 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 3.6e-05
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedp 56 
                 g++  A+ ++e+a+q++p++ +a+  L  a+ ++   + A+++L+++++ dp
  KHJ30333.1 332 GNLSLAALAFEAAIQKEPDHVDAWVMLGSAQAQNEKETPAIRALEQALKLDP 383
                 566678999**************************************99886 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 0.0002
      TPR_19  10 AlalleqalqedpknaearllLAeall 36 
                 A+++leqal+ dp n+ a+++LA  + 
  KHJ30333.1 371 AIRALEQALKLDPANLTALMGLAVSYT 397
                 99*********************8876 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00064
      TPR_19  11 lalleqalqedpk....naearllLAeallalgqldeAealLdalpeed 55 
                 ++l+ qa q +p+    +++++ +L  + + + ++d+A ++ +a+++++
  KHJ30333.1 446 IDLYIQAAQLSPDgehmDPDVQVGLGVLFYGAEEYDKAVDCFSAALAST 494
                 788999************************************9998775 PP

  == domain 4  score: 20.8 bits;  conditional E-value: 4.2e-07
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealL 48 
                 +g+ +eA+a++e+al+  p+  +ar++L   +++ g +deA   L
  KHJ30333.1 519 SGRSEEAIAAYEKALTIRPNFVRARYNLGVSCINIGCYDEAASHL 563
                 6899*************************************7655 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.1    0.0019       1.8      29      75 ..     340     382 ..     334     384 .. 0.78
   2 !   28.4   0.0   1.5e-09   1.5e-06       6      76 ..     467     537 ..     463     538 .. 0.92
   3 !    9.0   0.0    0.0017       1.7       5      42 ..     542     579 ..     539     589 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0019
      TPR_12  29 aleia.rrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                 a e+a ++   pdh   + +   Lg ++ + ++   A+++le+al+++
  KHJ30333.1 340 AFEAAiQKE--PDH---VDAWVMLGSAQAQNEKETPAIRALEQALKLD 382
                 666673444..887...6688889999999***************987 PP

  == domain 2  score: 28.4 bits;  conditional E-value: 1.5e-09
      TPR_12   6 lnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaiae 76 
                 ++ l+++ + +++yd+A +++ +al+  ++    +++++    + Lg ++  +gr eeA++++e+al i++
  KHJ30333.1 467 QVGLGVLFYGAEEYDKAVDCFSAALASTESGMSNKKDQLHLLWNRLGATLANSGRSEEAIAAYEKALTIRP 537
                 678999**********************99988888999999999***********************986 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.0017
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhp 42 
                 a +nl++ +   g ydeA ++l  al++++ + ++ + 
  KHJ30333.1 542 ARYNLGVSCINIGCYDEAASHLLGALAMHKVVENEGRQ 579
                 567*************************9888776664 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.71   7.1e+02      18      33 ..     371     384 ..     354     387 .. 0.73
   2 ?   -2.4   0.0       6.5   6.5e+03      17      32 ..     444     459 ..     442     462 .. 0.71
   3 !    8.4   0.0    0.0023       2.3       5      34 ..     470     497 ..     468     501 .. 0.80
   4 !   15.2   0.0   1.6e-05     0.016       2      31 ..     509     536 ..     508     541 .. 0.85
   5 !    8.6   0.0     0.002         2       3      31 ..     544     572 ..     542     583 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.71
       TPR_7  18 AielyeqsLaltkdpe 33 
                 Ai+ +eq  al  dp 
  KHJ30333.1 371 AIRALEQ--ALKLDPA 384
                 9999***..7777665 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 6.5
       TPR_7  17 eAielyeqsLaltkdp 32 
                 + i+ly q+ +l  d 
  KHJ30333.1 444 RVIDLYIQAAQLSPDG 459
                 6799****77766665 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.0023
       TPR_7   5 LarlysrlGdyeeAielyeqsLaltkdped 34 
                 L++l+    +y++A++++ +  al++ +++
  KHJ30333.1 470 LGVLFYGAEEYDKAVDCFSA--ALASTESG 497
                 788888889***********..66666655 PP

  == domain 4  score: 15.2 bits;  conditional E-value: 1.6e-05
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkd 31 
                 +++L+ +  + G+ eeAi  ye+  alt +
  KHJ30333.1 509 WNRLGATLANSGRSEEAIAAYEK--ALTIR 536
                 799********************..55544 PP

  == domain 5  score: 8.6 bits;  conditional E-value: 0.002
       TPR_7   3 lnLarlysrlGdyeeAielyeqsLaltkd 31 
                 +nL++ + + G y+eA++++  +La++k 
  KHJ30333.1 544 YNLGVSCINIGCYDEAASHLLGALAMHKV 572
                 79***********************9974 PP

>> TPR_20  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.1    0.0032       3.1      10      45 ..     340     375 ..     334     375 .. 0.92
   2 !   10.8   0.0   0.00046      0.46       3      39 ..     367     403 ..     365     416 .. 0.86
   3 ?    0.4   0.0      0.82   8.2e+02      20      52 ..     462     494 ..     450     523 .. 0.79
   4 !   15.7   0.0   1.4e-05     0.014       5      62 ..     523     579 ..     519     592 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0032
      TPR_20  10 eleaalaanpddldarldlAlallaagryeeAleqL 45 
                 ++eaa++++pd +da + l  a+++++++  A+ +L
  KHJ30333.1 340 AFEAAIQKEPDHVDAWVMLGSAQAQNEKETPAIRAL 375
                 689***************************999876 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00046
      TPR_20   3 adapelaeleaalaanpddldarldlAlallaagrye 39 
                 +++p +++le+al+ +p++l a + lA  +  +g   
  KHJ30333.1 367 KETPAIRALEQALKLDPANLTALMGLAVSYTNEGYDT 403
                 6899**************************9988765 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.82
      TPR_20  20 ddldarldlAlallaagryeeAleqLleilkrd 52 
                  d d ++ l  + + a++y++A++ + + l+++
  KHJ30333.1 462 MDPDVQVGLGVLFYGAEEYDKAVDCFSAALAST 494
                 58899999***************9888777765 PP

  == domain 4  score: 15.7 bits;  conditional E-value: 1.4e-05
      TPR_20   5 apelaeleaalaanpddldarldlAlallaagryeeAleqLleilkrdrkweddaark 62 
                 ++ +a+ e+al+ +p+ + ar++l    +  g y+eA+++Ll  l+ ++  e++  r+
  KHJ30333.1 523 EEAIAAYEKALTIRPNFVRARYNLGVSCINIGCYDEAASHLLGALAMHKVVENE-GRQ 579
                 578999***************************************999877444.333 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.2   4.1e-05     0.041      17      65 ..     340     388 ..     332     391 .. 0.88
   2 ?    2.4   0.0      0.18   1.8e+02      36      60 ..     471     495 ..     463     507 .. 0.88
   3 !   16.0   0.0     1e-05      0.01       2      57 ..     513     568 ..     512     586 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.1e-05
       TPR_9  17 vverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapda 65 
                 + e  ++  Pd+++ +   G ++aq +    A+++Le++l l+p++ +a
  KHJ30333.1 340 AFEAAIQKEPDHVDAWVMLGSAQAQNEKETPAIRALEQALKLDPANLTA 388
                 567778889***********************************98776 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.18
       TPR_9  36 GlllaqlGclsaAladLeaylalap 60 
                 G+l +  + + +A++++ a+la ++
  KHJ30333.1 471 GVLFYGAEEYDKAVDCFSAALASTE 495
                 899999**************99876 PP

  == domain 3  score: 16.0 bits;  conditional E-value: 1e-05
       TPR_9   2 kaiaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeayla 57 
                  a+++++ ++e+a+a++e  l + P+ ++ r+  G+     Gc+ +A+  L  +la
  KHJ30333.1 513 GATLANSGRSEEAIAAYEKALTIRPNFVRARYNLGVSCINIGCYDEAASHLLGALA 568
                 5789999*****************************************98866665 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.42   4.1e+02      13      33 .]     331     351 ..     321     351 .. 0.88
   2 ?    6.8   0.1     0.012        12       1      31 [.     353     383 ..     353     385 .. 0.87
   3 ?   -1.7   0.0         6     6e+03       2      13 ..     388     399 ..     387     403 .. 0.80
   4 ?    4.3   0.0     0.075        74       2      26 ..     466     490 ..     465     493 .. 0.83
   5 !    8.3   0.0    0.0041       4.1       6      32 ..     512     538 ..     497     538 .. 0.82
   6 ?   -1.1   0.0       3.8   3.8e+03       2      20 ..     542     560 ..     541     575 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.42
                 HHHHHHHHHHHHHHHHH-TT- CS
       TPR_6  13 lgdtdkAlealerlikeYPdS 33 
                 +g+ + A  a+e  i++ Pd+
  KHJ30333.1 331 GGNLSLAALAFEAAIQKEPDH 351
                 578899999**********96 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.012
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   1 dAlyklalsyrklgdtdkAlealerlikeYP 31 
                 dA  +l+ ++ +  + + A++ale+ +k  P
  KHJ30333.1 353 DAWVMLGSAQAQNEKETPAIRALEQALKLDP 383
                 78999******955888**********9888 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 6
                 HHHHHHHHHHHH CS
       TPR_6   2 Alyklalsyrkl 13 
                 Al+ la sy + 
  KHJ30333.1 388 ALMGLAVSYTNE 399
                 999******875 PP

  == domain 4  score: 4.3 bits;  conditional E-value: 0.075
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAlealerl 26 
                 ++  l+ +++ + ++dkA++ +   
  KHJ30333.1 466 VQVGLGVLFYGAEEYDKAVDCFSAA 490
                 67789*****977*******99876 PP

  == domain 5  score: 8.3 bits;  conditional E-value: 0.0041
                 HHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   6 lalsyrklgdtdkAlealerlikeYPd 32 
                 l+  + + g++++A++a+e+ ++  P+
  KHJ30333.1 512 LGATLANSGRSEEAIAAYEKALTIRPN 538
                 455555547*************99997 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 3.8
                 HHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAl 20 
                 A y+l+ s ++ g +d+A 
  KHJ30333.1 542 ARYNLGVSCINIGCYDEAA 560
                 899***9998866666665 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.022        22       6      66 ..     335     396 ..     330     401 .. 0.88
   2 !   18.8   0.3   1.4e-06    0.0014       4      80 ..     479     564 ..     476     566 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.022
                 HHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHH CS
      ANAPC3   6 knAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcl 66 
                   A + +e + ++e+++ ++  +l+ +  +n++ + A++ l++a kl++ +l +++ +A ++
  KHJ30333.1 335 SLAALAFEAAIQKEPDHVDAWVMLGSAQAQNEKETPAIRALEQAlKLDPANLTALMGLAVSY 396
                 557888899999999999999****************************9999999888765 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 1.4e-06
                 -HHHHHHHHHHHH.......HHH--HHHHHH..HHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3   4 nyknAiflaerlla......aetespedayl..lAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                  y++A+ +++ +la      +++++  ++++  l+ +l ++g+ ++A+  ++ka  ++++  ++ry ++ +++ ++ y+eA ++L 
  KHJ30333.1 479 EYDKAVDCFSAALAstesgmSNKKDQLHLLWnrLGATLANSGRSEEAIAAYEKAlTIRPNFVRARYNLGVSCINIGCYDEAASHLL 564
                 6888888888888432222233333333555556*************************************************997 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.1   0.00084      0.84     148     194 ..     354     400 ..     335     420 .. 0.79
   2 !    6.8   0.0    0.0035       3.5     142     186 ..     502     546 ..     470     571 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00084
      TPR_15 148 fllaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlg 194
                  ++++++++ q+ ++  A+r++++Al+l+p++ ++  +l   + + g
  KHJ30333.1 354 AWVMLGSAQAQNEKETPAIRALEQALKLDPANLTALMGLAVSYTNEG 400
                 6999***************************9988877766665555 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0035
      TPR_15 142 aeqsaafllaraelyrqegqtdaAlrdyreAlalapdsselraal 186
                   q  + + ++++   + g++++A+ +y++Al+  p+   +r +l
  KHJ30333.1 502 KDQLHLLWNRLGATLANSGRSEEAIAAYEKALTIRPNFVRARYNL 546
                 335567899999************************977777666 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       3.7   3.7e+03       8      30 ..     358     380 ..     357     381 .. 0.67
   2 ?   -0.8   0.0       1.6   1.6e+03       8      31 ..     470     493 ..     467     496 .. 0.80
   3 !   14.1   0.4   3.2e-05     0.032       6      32 ..     510     536 ..     510     536 .. 0.96
   4 ?    2.6   0.0      0.14   1.4e+02       4      34 ..     542     572 ..     540     577 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 3.7
      TPR_10   8 LanalrqrgrydeAealleeala 30 
                 L+ a  q  + + A + le+al 
  KHJ30333.1 358 LGSAQAQNEKETPAIRALEQALK 380
                 66666666666677777788875 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.6
      TPR_10   8 LanalrqrgrydeAealleealai 31 
                 L+++ +   +yd+A++ +  ala 
  KHJ30333.1 470 LGVLFYGAEEYDKAVDCFSAALAS 493
                 777778888999999999888886 PP

  == domain 3  score: 14.1 bits;  conditional E-value: 3.2e-05
      TPR_10   6 nNLanalrqrgrydeAealleealair 32 
                 n L+++l + gr +eA a +e+al ir
  KHJ30333.1 510 NRLGATLANSGRSEEAIAAYEKALTIR 536
                 78**********************997 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.14
      TPR_10   4 slnNLanalrqrgrydeAealleealairrr 34 
                 ++ NL++   + g ydeA  +l  ala+++ 
  KHJ30333.1 542 ARYNLGVSCINIGCYDEAASHLLGALAMHKV 572
                 66789999999999**************985 PP

>> TPR_3  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.1    0.0086       8.6       6      30 ..     469     489 ..     469     494 .. 0.83
   2 ?    5.4   0.0     0.019        19       7      34 ..     512     537 ..     506     538 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0086
                 HHHHHHHHTT-HHHHHHH..HHHHH CS
       TPR_3   6 syAaefynkkkyqeArelfsYalla 30 
                 +++  fy  ++y++A++ fs    a
  KHJ30333.1 469 GLGVLFYGAEEYDKAVDCFS----A 489
                 578899************98....3 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.019
                 HHHHHHHTT-HHHHHHH..HHHHHHH-T CS
       TPR_3   7 yAaefynkkkyqeArelfsYallaildk 34 
                 ++a++ n+++ +eA+ +  Y+ + ++++
  KHJ30333.1 512 LGATLANSGRSEEAIAA--YEKALTIRP 537
                 79***************..888888876 PP

>> DUF1641  Protein of unknown function (DUF1641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.2   0.00024      0.24      20      31 ..     463     474 ..     462     477 .. 0.95

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00024
     DUF1641  20 DPDVqrGLGfll 31 
                 DPDVq GLG+l+
  KHJ30333.1 463 DPDVQVGLGVLF 474
                 9*********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       652  (0.0363657); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.65u 0.26s 00:00:00.91 Elapsed: 00:00:00.45
# Mc/sec: 4294.06
//
Query:       KHJ30334.1  [L=290]
Description: putative nucleic acid-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-37  127.1   0.7    1.7e-20   72.6   0.1    2.2  2  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
     0.0038   17.3   0.1       0.73   10.0   0.1    2.7  2  RRM_7     RNA recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.6   0.1   1.9e-24   1.7e-20       1      69 [.     119     187 ..     119     188 .. 0.99
   2 !   53.1   0.0   2.3e-18     2e-14       1      70 []     208     278 ..     208     278 .. 0.99

  Alignments for each domain:
  == domain 1  score: 72.6 bits;  conditional E-value: 1.9e-24
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ++VgnL + vte++Lk+ Fs fGpik++ +  d++g skgf++VeFe+ ++A++A+ea n + ++gr+l
  KHJ30334.1 119 IYVGNLVFHVTEDDLKKEFSSFGPIKNAIIAVDARGLSKGFGYVEFENTDQARSAIEAKNQMVFEGRRL 187
                 8******************************************************************87 PP

  == domain 2  score: 53.1 bits;  conditional E-value: 2.3e-18
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 lfVgn+++++t+ eL++lF+++    +i++  d +tg+++gfa  eF s edA +A+e+l  ++++gr+l+
  KHJ30334.1 208 LFVGNIAFEMTDAELHKLFREVRNCFDIRVAVDrRTGQPRGFAHAEFLSVEDAIAAKEKLTDREIHGRKLR 278
                 8*******************************************************************986 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.1   8.2e-05      0.73       4      29 ..     119     144 ..     116     199 .. 0.83
   2 !    4.6   0.0    0.0038        34       1      25 [.     205     229 ..     205     250 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 8.2e-05
       RRM_7   4 vFvGGlPiDiteeelkatfkefgkvl 29 
                 ++vG l   +te++lk+ f++fg+++
  KHJ30334.1 119 IYVGNLVFHVTEDDLKKEFSSFGPIK 144
                 89*********************975 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0038
       RRM_7   1 srkvFvGGlPiDiteeelkatfkef 25 
                 s+ +FvG +  ++t++el++ f+e 
  KHJ30334.1 205 SKTLFVGNIAFEMTDAELHKLFREV 229
                 6779*****************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 2118.01
//
Query:       KHJ30335.1  [L=435]
Description: putative caspase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.6e-59  200.7   0.0    4.8e-59  200.3   0.0    1.1  1  Peptidase_C14  Caspase domain


Domain annotation for each model (and alignments):
>> Peptidase_C14  Caspase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.3   0.0   2.7e-63   4.8e-59       1     242 [.     118     423 ..     118     428 .. 0.91

  Alignments for each domain:
  == domain 1  score: 200.3 bits;  conditional E-value: 2.7e-63
                    EEEEEEECSTTSSTCC-STTHHHHHHHHHHHHHHHTTEEEEEEEGGEES............................-CHHHHHHHHHHHHCHSGG CS
  Peptidase_C14   1 kkAliIginnYpgtkaeLrGcanDaermaklLvkrlgFevenililtdd............................ptgknirkalkwlvksadh 68 
                    +kAl+Igin Y g++ eLrGc+nD++++++ L +++g+  en++ilt                              pt++ni++a++wlv+ ++ 
     KHJ30335.1 118 RKALLIGIN-YFGQNGELRGCINDVHNVSAYLKENYGYLSENMVILTGKylihistainffsdlnfyvddqqnpvgqPTKNNILRAMSWLVEGCQ- 211
                    79*******.996777*******************************************************************************. PP

                    TTESEEEEEEESEEET..............EEECTTC..SSEEEHHHHHHTTSTTTHGGGTTS-EEEEEESES.SSBCBEEEEEEES-SSS..... CS
  Peptidase_C14  69 spgDslvvhysGHGtrvpae..........civpvdv..nsliqdddirdlfggdklpslagkpktiiidaCr.gglldkgiekdtsptnk..... 146
                     p+D+l++hysGHG+++++           +i+pvd+   ++i dd+i++++ +++lp++a  ++t+i+d+C+ g+ ld ++  +t    k     
     KHJ30335.1 212 -PNDALFFHYSGHGGQTDDLdgdeedghdeVIYPVDFkqAGHIVDDQIHQIL-VKPLPAGA--RLTAIFDSCHsGSCLDLPYIYSTQGILKepnla 303
                    .**************98888999***************99999999999998.9*******..**********99999777777777776677777 PP

                    .............................HCCCHCHHHHHHCSHHCEEECTTTSEEEEESSSTTBSCEEETTTEE...HHHHHHHHHH.HHHTTTS CS
  Peptidase_C14 147 .............................feedssskekkpekqslsklpseadvlllsgcqddqtSadgsengs...aftqalqkvl.eekggki 209
                                                 f  ++ +  + + k+sl + +s+adv++lsg++ddqtSad++  ++   a+++a+++++ +++++  
     KHJ30335.1 304 keagqgllgiigsasqedyggvarqliglF--QKAKTGDGAYKKSLATKTSPADVVMLSGSKDDQTSADATIASQatgAMSWAFITAMkKNPNQ-- 395
                    778888888888888899999999997443..6667778899**********************************************666777.. PP

                    BHHHHHHHHHHHHCCTTTCTTSBEEEEEEEEES CS
  Peptidase_C14 210 slkellnkvrkrlkslkkkngykqrPglssndl 242
                    s+ +lln +r+ l +    ++y+q+P+ls+++ 
     KHJ30335.1 396 SYVQLLNSIRDVL-A----TKYSQKPQLSCSHP 423
                    *************.3....46*********886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3256.74
//
Query:       KHJ30336.1  [L=790]
Description: putative checkpoint protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-48  165.7   0.0    2.2e-48  165.0   0.0    1.3  1  Pkinase      Protein kinase domain
      7e-19   68.1   0.0    1.1e-18   67.5   0.0    1.3  1  Pkinase_Tyr  Protein tyrosine kinase
     0.0029   17.2   0.1     0.0056   16.3   0.1    1.4  1  RIO1         RIO1 family
     0.0058   16.0   0.1     0.0098   15.3   0.1    1.3  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.017   14.5   0.0      0.036   13.4   0.0    1.6  1  Kinase-like  Kinase-like
      0.022   14.7   0.1       0.65    9.9   0.2    2.2  2  APH          Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.0   0.0   7.2e-52   2.2e-48       2     261 ..     447     728 ..     446     730 .. 0.85

  Alignments for each domain:
  == domain 1  score: 165.0 bits;  conditional E-value: 7.2e-52
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEE..SSEEEEEEE--TTEBHHHHHH.....HH CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfee..kdelylvleyveggeladlle.....rk 92 
                 ++l  +G+G++++Vy+++ +e++k +A+Kk++ e+ +++    +  Ei +lk+l+  ++++rly++  +  k +l +++e+ e + ++++le     ++
  KHJ30336.1 447 TRLDCIGRGGSSRVYRVM-AENSKFFALKKVSLENVDENAIIGFKGEIDLLKRLEgVDRVIRLYDYELNesKGSLSVLMELGELD-MNKILEvrlksDN 543
                 56778*************.8*******************************************9986553488899*****9977.7777777777888 PP

                 SS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS....BCTTTSCGGGS-HHHH.................T CS
     Pkinase  93 gslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk....ltsfvgtseYlAPEvl.................k 170
                 ++++++ +++++k++le l+ +H++ ++H DlKp+N+ +  +g+lK++DFG+a+ ++++++     ++++gt++Y++PE l                 k
  KHJ30336.1 544 SKFDPSFVRHYWKEMLECLQAIHAHDVVHSDLKPHNFVLV-QGQLKLIDFGIANAIQTDETvnvhRETQIGTPNYMSPESLidsnakpdangripnapK 641
                 89**************************************.******************99999999**************999988877766665444 PP

                 TSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS........-HHHHHHHHHHT-SSGCCSTTHHHHHTS CS
     Pkinase 171 eneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeasei........seeakdllkkllkkdpkkRltaeellqh 261
                   + +k++D+WslG+ily++++g+ pf++ +++ +  +          i++    ++p ++          ++++++ lkk+l++d++ R++a+ell++
  KHJ30336.1 642 LMKLGKPSDIWSLGCILYQMTYGRAPFAHIQNQMQRCH---------AIIN---HNYPIEYRSvgignvpvPNSLIKTLKKCLNRDQRMRPSATELLHS 728
                 4778************************5554443322.........2332...23333333234455566999**********************997 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.5   0.0   3.7e-22   1.1e-18       6     256 ..     451     726 ..     446     728 .. 0.81

  Alignments for each domain:
  == domain 1  score: 67.5 bits;  conditional E-value: 3.7e-22
                  EEEEESSEEEEEEEEETTTTSSEEEEEEEEE.STTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEE..SSSSEEEEEE--TTE...BHHHHHHHTC CS
  Pkinase_Tyr   6 klGeGafGkVvegtlkgekekkevkVavKtl.keeateeekeelleeakimkkl.khpnivkllgvct..keepllivteyvkgG...dLlkfLrkke 96 
                   +G+G  ++V++  ++     ++   a+K++  e+ +e+    +  e++++k+l   +++++l+   +  ++++l +++e+ +      L+  L+++ 
   KHJ30336.1 451 CIGRGGSSRVYRVMAE-----NSKFFALKKVsLENVDENAIIGFKGEIDLLKRLeGVDRVIRLYDYELneSKGSLSVLMELGELDmnkILEVRLKSD- 542
                  6899999999999998.....455566666636888999999************999********99954555699999987653222345555555. PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE.EETTSSTSGGGGS-HHHHHHSE............ CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey.vkkeeaklpvkWmapEslkekk............ 181
                  ++k++ + + ++  ++ + ++ ++++++vH dl   N +l  + + k+ DfG+a++i++d++  v++e++    ++m+pEsl +++            
   KHJ30336.1 543 NSKFDPSFVRHYWKEMLECLQAIHAHDVVHSDLKPHNFVLV-QGQLKLIDFGIANAIQTDETVnVHRETQIGTPNYMSPESLIDSNakpdangripna 639
                  9************************************8777.6899***********999998455555567889*******999999********** PP

                  .....EEHHHHHHHHHHHHHHHHTTSSGTTTTS.HHHHHHHHH.HTTEES-BBT......TSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 182 .....ftsksDvWsfGvllwEiftlgespypgl.kneevlekl.kegkrlekpe......kcpeelyelmkkcweedpeeRptfselv 256
                       + + sD+Ws G +l+ +  +g+ p++++ ++++ ++++ ++++ +e  +       +p++l + +kkc+++d++ Rp+ +el+
   KHJ30336.1 640 pklmkLGKPSDIWSLGCILYQMT-YGRAPFAHIqNQMQRCHAIiNHNYPIEYRSvgignvPVPNSLIKTLKKCLNRDQRMRPSATELL 726
                  ***99999************976.5********5444555555477777665432222115799*******************99986 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   1.9e-06    0.0056      91     150 ..     532     593 ..     490     606 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.9e-06
                 TTEEGGBHHHCG.-..HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETTEEEE--GT CS
        RIO1  91 dgvaapklkdve.e..eeeaeelyeevleemrklykeaglvHaDLSeyNvlvdedkvviIDvs 150
                 +++  ++lk  + +   +  +++ +e+le   ++++ + +vH DL   N ++ ++++ +ID++
  KHJ30336.1 532 NKILEVRLKSDNsKfdPSFVRHYWKEMLE-CLQAIHAHDVVHSDLKPHNFVLVQGQLKLIDFG 593
                 44555566655544523334455555555.777788*************************97 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   3.3e-06    0.0098      90     168 ..     520     594 ..     485     607 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.3e-06
         Kdo  90 yrAlllterlegaqdLedllakwae.laeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldk 168
                    l+   +l+  + Le+ l++ ++ ++ +  r+ +k+     + +h+ +v H dl ++n+ l q++     + liD+  
  KHJ30336.1 520 LSVLMELGELDMNKILEVRLKSDNSkFDPSFVRHYWKEMLECLQAIHAHDVVHSDLKPHNFVLVQGQ-----LKLIDFGI 594
                 44444455677777788888875557999999*******************************9997.....99999965 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   1.2e-05     0.036     153     288 .]     558     719 ..     519     719 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.2e-05
  Kinase-like 153 lirlaanLqakglvhgkftvdnllldekgglmlggft...aLvragtkvvlseve....kgfaPpEllgsrgg.....ytrknk..tkmthkldaWql 236
                  ++   + ++a+ +vh +++++n++l + g+l+l +f+   a+ ++ t  v  e++    +  +P  l+ s ++       +++   +k   + d W l
   KHJ30336.1 558 MLECLQAIHAHDVVHSDLKPHNFVLVQ-GQLKLIDFGianAIQTDETVNVHRETQigtpNYMSPESLIDSNAKpdangRIPNAPklMKLGKPSDIWSL 654
                  556678999****************85.9******9732255555555555666577745556666666655544433223333114556678***** PP

  Kinase-like 237 GlviyriwclklPltlateeakeew.........kfklc...k.kipekvkaLlkkfLqlsqedR 288
                  G   y +    +P+  ++++++  +         +++ +   + ++p+ +   lkk L+++q+ R
   KHJ30336.1 655 GCILYQMTYGRAPFAHIQNQMQRCHaiinhnypiEYRSVgigNvPVPNSLIKTLKKCLNRDQRMR 719
                  ******************99998888888888885555522234788888888888888888876 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.011        33       6     108 ..     453     568 ..     451     570 .. 0.74
   2 ?    9.9   0.2   0.00022      0.65     152     196 ..     554     595 ..     537     598 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.011
                 --.SSCEEEEEEETT.--EEEEEE-TT.S-HHHHHHHHHHHHHHHHTT-..B--B-CTTBS-EEETTE...EEEEEE----EE-SS.......HHHHHH CS
         APH   6 sggasnrtylvttpa.gryvlrrnppa.raaeeirrevallrlLakagv..pvPevlagdtddeeigl...lfalieyvpgrsllr.......klsaaq 90 
                 + g s+r+y+v  ++ + ++l+ ++ +   ++ i ++  + +lL +++   +v ++++++  +e +g    l++l e    ++l+        k +++ 
  KHJ30336.1 453 GRGGSSRVYRVMAENsKFFALKKVSLEnVDENAIIGFKGEIDLLKRLEGvdRVIRLYDYE-LNESKGSlsvLMELGELDMNKILEVrlksdnsKFDPSF 550
                 5678999********88999**99999777777777777777777777667899****76.55555551444444444444444448888888889999 PP

                 HHHHHHHHHHHHCCHHCH CS
         APH  91 lpellealgeflaalhqv 108
                  ++++ ++ e+l a+h++
  KHJ30336.1 551 VRHYWKEMLECLQAIHAH 568
                 999999999999999987 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00022
                 HHHHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 152 vlaalaallpgelptvllHgDlhpgNllvdpddgrvtGviDfeda 196
                  + ++++ l++  ++ ++H Dl+p+N+++   +g++  +iDf+ a
  KHJ30336.1 554 YWKEMLECLQAIHAHDVVHSDLKPHNFVLV--QGQL-KLIDFGIA 595
                 56666666666668899*************..6666.69***976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (790 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       457  (0.0254894); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.40
# Mc/sec: 5940.67
//
Query:       KHJ30337.1  [L=160]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1230.52
//
Query:       KHJ30338.1  [L=1332]
Description: hypothetical protein EV44_g4481 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1213  (0.0676558); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.87u 0.28s 00:00:01.14 Elapsed: 00:00:00.46
# Mc/sec: 8739.25
//
Query:       KHJ30339.1  [L=149]
Description: hypothetical protein EV44_g0549 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       371  (0.0206927); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1073.39
//
Query:       KHJ30340.1  [L=1226]
Description: putative inner centromere protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-15   57.2   0.8    1.2e-15   57.2   0.8    2.4  2  INCENP_ARK-bind  Inner centromere protein, ARK binding region
  ------ inclusion threshold ------
      0.085   12.7   0.0        0.2   11.5   0.0    1.5  1  NT5C             5' nucleotidase, deoxy (Pyrimidine), cytosol


Domain annotation for each model (and alignments):
>> INCENP_ARK-bind  Inner centromere protein, ARK binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.6       1.5   1.3e+04       6      19 ..     991    1004 ..     987    1005 .. 0.49
   2 !   57.2   0.8   1.3e-19   1.2e-15       1      55 []    1120    1174 ..    1120    1174 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 1.5
  INCENP_ARK-bind    6 dedddedeprkkip 19  
                       d d+++d+p+ + p
       KHJ30340.1  991 DGDSENDRPKMTAP 1004
                       34444444776665 PP

  == domain 2  score: 57.2 bits;  conditional E-value: 1.3e-19
  INCENP_ARK-bind    1 dinsDdedddedeprkkipsWAqspeLrqaLikqepiDpdeiFGpikplnleeiF 55  
                       +i++D++dd+ed+p  + p W+++pe++++L+ qe iDp e+FG++ pln+ee+F
       KHJ30340.1 1120 EIHTDSDDDSEDQPIGVRPGWTDTPEIQKQLEYQEIIDPAEVFGQPGPLNMEEVF 1174
                       79****************************************************9 PP

>> NT5C  5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   2.2e-05       0.2      82     122 ..      38      78 ..      27      86 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.2e-05
        NT5C  82 egrlvvitaallqfydavkekveWldehlplipyrnlvlvk 122
                  + l ++ + +  f ++v+++v+Wl+eh+  i   n v v 
  KHJ30340.1  38 SCALQIVQSETEEFTYSVRNEVDWLNEHMAEIFNANHVSVA 78 
                 57999*************************99999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2149  (0.119862); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.95u 0.30s 00:00:01.25 Elapsed: 00:00:00.46
# Mc/sec: 7996.26
//
Query:       KHJ30341.1  [L=97]
Description: hypothetical protein EV44_g3512 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 746.21
//
Query:       KHJ30342.1  [L=382]
Description: hypothetical protein EV44_g2454 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1234  (0.068827); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 3010.76
//
Query:       KHJ30343.1  [L=647]
Description: putative capsule-associated protein cap1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.7e-13   48.8   5.1    1.6e-11   43.7   0.9    3.4  2  Glyco_transf_90  Glycosyl transferase family 90


Domain annotation for each model (and alignments):
>> Glyco_transf_90  Glycosyl transferase family 90
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.1   0.2     0.001        18       9      94 ..     138     221 ..     132     238 .. 0.77
   2 !   43.7   0.9   9.1e-16   1.6e-11     202     323 ..     486     620 ..     342     625 .. 0.72

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.001
  Glyco_transf_90   9 yfrvieeDLkpwret...gi..treaverakrkalfrlviingrvyvekykksvqtrdvftiwgilqLlrkypgklpDlelmfncdDrPvv 94 
                       f++i +DL+p+  +    i     ++++  ++    l i +++v+  +    v+ r    + +  ++++ +   lpD+++ +n  D+P +
       KHJ30343.1 138 DFKQIMDDLRPFWAIkpsTIrlQAAHLHQNPDHGISGLHIRQNKVWKLT---NVDWR----MEIFSKMVKPFVKFLPDMDVAMNRLDQPRM 221
                      699********97653223333566677777788888999999999887...77888....666777778888889***********9974 PP

  == domain 2  score: 43.7 bits;  conditional E-value: 9.1e-16
  Glyco_transf_90 202 kegvkessledqckhkYkiyieGvaasvsekyilacdslvllvkpeyydffsreLkplehYvPiksk.dklrdl.............keavdwg 281
                       +  +++ l++q+k+kY + ++G + s + +  l  +sl ++ ++ + ++  + L +++h+vP+++  d+l ++             k  v ++
       KHJ30343.1 486 LSFKEQMTLSQQFKYKYLVDVDGHSFSGRWHAFLRSKSLPIK-STIFREWHDSRLFAWKHFVPLDNLyDDLYSIltyfiglgspisaKRGVPYV 578
                      4556899*******************************9876.689******************9852456555222223333333356799** PP

  Glyco_transf_90 282 nahdekaqeiaeegseFireeLkmddvydYmfhLlteYakll 323
                      + h+ + ++i+ +g+e++ + L+ +d+  Y f+Ll eY++l+
       KHJ30343.1 579 QRHNFEGRKIGLQGREWAAKVLRQEDIEVYLFRLLLEYGRLI 620
                      ***************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (647 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.39
# Mc/sec: 5030.22
//
Query:       KHJ30344.1  [L=75]
Description: hypothetical protein EV44_g2273 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       340  (0.0189637); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.23s 00:00:00.57 Elapsed: 00:00:00.36
# Mc/sec: 616.29
//
Query:       KHJ30345.1  [L=267]
Description: putative proliferating cell nuclear antigen [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-54  182.2   3.5    7.9e-54  180.7   3.5    1.7  1  PCNA_N           Proliferating cell nuclear antigen, N-termin
    1.2e-49  167.7   0.1    3.2e-49  166.4   0.0    1.6  2  PCNA_C           Proliferating cell nuclear antigen, C-termin
    5.3e-08   32.6   0.1    6.7e-08   32.3   0.1    1.1  1  Rad9             Rad9
    0.00026   20.1   1.3     0.0074   15.4   1.3    2.0  1  Rad1             Repair protein Rad1/Rec1/Rad17
     0.0059   15.8   0.5      0.018   14.1   0.2    2.0  2  Hus1             Hus1-like protein
  ------ inclusion threshold ------
      0.089   12.6   0.1       0.37   10.6   0.0    2.1  2  DNA_pol3_beta_3  DNA polymerase III beta subunit, C-terminal 
      0.092   13.0   0.3       0.21   11.9   0.0    1.7  2  DUF1480          Protein of unknown function (DUF1480)


Domain annotation for each model (and alignments):
>> PCNA_N  Proliferating cell nuclear antigen, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.7   3.5   3.1e-57   7.9e-54       1     124 [.       9     132 ..       9     133 .. 0.98

  Alignments for each domain:
  == domain 1  score: 180.7 bits;  conditional E-value: 3.1e-57
                 CEEEEESSHHHHHHHHHHHTTTCSEEEEEEETTEEEEEEE-TTSSEEEEEEEEGGGSSEEEESS-EEEEEEHHHHHHHHTTSTTTSEEEEEEETTSSEE CS
      PCNA_N   1 mlearleqasllkklleaikdlvneanfdcddsGislqalDsshvaLvslelrsegfekyrCDrnlalgvnlnslskilkcannedsvtlkaedeadtl 99 
                 +learleqa llkk+++aikdlv++ nfdc+dsG+ lqa+D+shvaLvs+ lr+e+f+ yrCDrnlalg+nl+sl+k+l+ a+++d++t+kaed +d+l
  KHJ30345.1   9 LLEARLEQADLLKKIVDAIKDLVQDCNFDCNDSGVALQAMDNSHVALVSMMLRAESFSPYRCDRNLALGLNLASLTKVLRAAQADDILTIKAEDAPDSL 107
                 59************************************************************************************************* PP

                 EEEEEECTSSEEEEEEEEEEEBGCE CS
      PCNA_N 100 alvfesekkdkiaeydlklklidld 124
                 +l+fes+++d+i+eydlkl++id++
  KHJ30345.1 108 NLLFESSENDRISEYDLKLMDIDQE 132
                 *******************999983 PP

>> PCNA_C  Proliferating cell nuclear antigen, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.1   2.7e+03      31      97 ..      33      94 ..      17     114 .. 0.52
   2 !  166.4   0.0   1.2e-52   3.2e-49       1     128 []     135     262 ..     135     262 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.1
                EEEEEEETTEEEEEEEETTEEEEEEE--BEESSSGGGCBEEEESS-EEEEEEHHHHHHHGGGGGC-S CS
      PCNA_C 31 svvisvtkegvkfsasGdiGsasivlkqvkdvdkeeeavklelkepvtltfalkYlaeftkatsLse 97
                + +  +   gv  +a  +       ++ v+++ + e+++  + ++   l   l  l+++ +a+   +
  KHJ30345.1 33 DCNFDCNDSGVALQAMDN-----SHVALVSMMLRAESFSPYRCDRNLALGLNLASLTKVLRAAQADD 94
                555555555554444322.....12233444445555555555555555555555555555555444 PP

  == domain 2  score: 166.4 bits;  conditional E-value: 1.2e-52
                 ----SS-SEEEEEEHHHHHHHHHHHTTT-SEEEEEEETTEEEEEEEETTEEEEEEE--BEESSSGGGCBEEEESS-EEEEEEHHHHHHHGGGGGC-SEE CS
      PCNA_C   1 gipdseydavvklpssefaricrdlsqlsdsvvisvtkegvkfsasGdiGsasivlkqvkdvdkeeeavklelkepvtltfalkYlaeftkatsLserv 99 
                 gip++ey a++++ps+ef+ric dl  ls+sv i ++k+gvkf +sGdiG++s++l+ +++v+k+e  v++el+epv+ltf+lkYl++f ka++Ls++v
  KHJ30345.1 135 GIPETEYAATISMPSTEFKRICVDLIALSESVSIEASKDGVKFLCSGDIGNGSVTLRSHTNVEKPEMNVEIELTEPVSLTFSLKYLVNFCKASALSKTV 233
                 8************************************************************************************************** PP

                 EEEEETTSEEEEEEEETTCEEEEEEE-BS CS
      PCNA_C 100 tlslssevPlvveykikdvgllayllakk 128
                 +l ls+evPl+vey+++   +l+++la+k
  KHJ30345.1 234 KLCLSNEVPLLVEYNLAGSSYLRFYLAPK 262
                 ***************************97 PP

>> Rad9  Rad9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.1   2.6e-11   6.7e-08       2     229 ..      21     252 ..      20     257 .. 0.86

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 2.6e-11
        Rad9   2 aralqclsrigdelyleisedglelrtvnssrSayalvtlkksfFdkyekevseqirckilvKsvlsvfrslsakektvekvkisidekksrlivqllC 100
                  +++ ++  + ++ +++ ++ g++l+++++s+ a +++ l+ + F+ y  + + ++ + +++ s+ +v+r  +a+   + ++k +   ++ +l ++   
  KHJ30345.1  21 KKIVDAIKDLVQDCNFDCNDSGVALQAMDNSHVALVSMMLRAESFSPY--RCDRNLALGLNLASLTKVLR--AAQADDILTIKAEDAPDSLNLLFE-SS 114
                 57788888888999**********************************..9999***************9..445666665555555555566655.46 PP

        Rad9 101 khgvkkthkisledseslkavfdkettpsklriksrvLsdllehfsssleeitielakervllksyeeeekdnkkalstelsideeeFe.qyqlaedve 198
                 +++ + ++ ++l d ++ ++ + +   + +++++s  ++ +   +    e ++ie++k+ v++  + + ++++  +l++   +++ e + +++l+e v+
  KHJ30345.1 115 ENDRISEYDLKLMDIDQEHLGIPETEYAATISMPSTEFKRICVDLIALSESVSIEASKDGVKFLCSGDIGNGS-VTLRSHTNVEKPEMNvEIELTEPVS 212
                 889999**************************************************************99999.99*******997776489******* PP

        Rad9 199 itlslkefk.........allvfaeslsaslslafdeaGk 229
                 +t+slk +           ++ ++ s +++l ++++ aG+
  KHJ30345.1 213 LTFSLKYLVnfckasalsKTVKLCLSNEVPLLVEYNLAGS 252
                 ******9876667776666677777777777777777775 PP

>> Rad1  Repair protein Rad1/Rec1/Rad17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   1.3   2.9e-06    0.0074     114     261 ..      89     235 ..       9     240 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2.9e-06
        Rad1 114 ssakatscklsYkgeGsPLvliLee..agvtttcelsTyepe.edldleldrqevvlkvilkselLhsalteLdatskklkilassekkapvfalsakg 209
                 + +++  ++++ ++  + L+l++e   ++   + +l+ ++++ e   l   ++e ++++ + s  ++ +  +L a s++++i as+       ++  +g
  KHJ30345.1  89 AAQADDILTIKAEDAPDSLNLLFESseNDRISEYDLKLMDIDqEH--LGIPETEYAATISMPSTEFKRICVDLIALSESVSIEASKD----GVKFLCSG 181
                 444455677777777788999999977777888888888888444..55568********************************995....79****** PP

        Rad1 210 elgssevefpneksvle.kfevssl.sessessYkfallkkaakalalssKvsl 261
                 ++g+ +v + +  +v + +++v ++  e+++  + +++l +  ka als+ v+l
  KHJ30345.1 182 DIGNGSVTLRSHTNVEKpEMNVEIElTEPVSLTFSLKYLVNFCKASALSKTVKL 235
                 ********9999887542455556667888888**************9998776 PP

>> Hus1  Hus1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.2   7.1e-06     0.018       5      98 ..      12      99 ..       9     219 .. 0.92
   2 ?   -0.0   0.0      0.15   3.8e+02      13     100 ..     152     238 ..     139     254 .. 0.49

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 7.1e-06
        Hus1  5 aqltdaetlkkvlqslsklgkecilrltpeklrfiiiteaddgvqvwaqlqvdaiFeeyeieSndeneInlevdlaaLlraLksaeaaksvqlr 98
                a+l++a +lkk++ +++ l ++c    +++ + ++ +  +++ v ++  + + + F+ y+++ n     +l ++la+L ++L+ a+a   ++++
  KHJ30345.1 12 ARLEQADLLKKIVDAIKDLVQDCNFDCNDSGVALQAM--DNSHVALVSMMLRAESFSPYRCDRNL----ALGLNLASLTKVLRAAQADDILTIK 99
                789999*******************************..899999999999999*******9776....9***************998777666 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.15
        Hus1  13 lkkvlqslsklgkecilrltpeklrfiiiteaddgvqvwaqlqvdaiFeeyeieSndeneInlevdlaaLlraLksaeaaksvqlrLt 100
                 +k+++  l +l   + +  +++ + f+++ + ++g +v  +  ++    e+ +e   ++ ++l+ +l+ L+   k ++ +k v+l L+
  KHJ30345.1 152 FKRICVDLIALSESVSIEASKDGVKFLCSGDIGNG-SVTLRSHTNVEKPEMNVEIELTEPVSLTFSLKYLVNFCKASALSKTVKLCLS 238
                 55555555555555555555555555555432222.2222222222222444444433455555555555555555555554444444 PP

>> DNA_pol3_beta_3  DNA polymerase III beta subunit, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.97   2.5e+03      38      57 ..      97     118 ..      68     134 .. 0.57
   2 ?   10.6   0.0   0.00015      0.37      59     106 ..     196     246 ..     149     255 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.97
                      EEEEE..TTEEEEEEEETTSEE CS
  DNA_pol3_beta_3  38 rLsle..egqlklsaensevge 57 
                       +++e   ++l+l  e+se ++
       KHJ30345.1  97 TIKAEdaPDSLNLLFESSENDR 118
                      2222222455555555555555 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00015
                      EE..EEEEBEE.SS-EEEEEEHHHHHHHHHHH-.SSEEEEEESSTTS-EEEE CS
  DNA_pol3_beta_3  59 eE..evdvnye.GeeleiafNvsYlldalkale.teevelqltdstkpvlls 106
                      +E  e++v++e  e++++ f+ +Yl++ +ka + ++ v+l+l++ + p+l++
       KHJ30345.1 196 VEkpEMNVEIElTEPVSLTFSLKYLVNFCKASAlSKTVKLCLSNEV-PLLVE 246
                      3433677777789****************9976367899*999998.88776 PP

>> DUF1480  Protein of unknown function (DUF1480)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       3.6   9.3e+03      25      36 ..      26      37 ..       4      55 .. 0.50
   2 ?   11.9   0.0   8.2e-05      0.21      10      60 ..     126     176 ..     118     180 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.6
     DUF1480 25 gektvsiPCksd 36
                  k +   C+ d
  KHJ30345.1 26 AIKDLVQDCNFD 37
                444444455555 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 8.2e-05
     DUF1480  10 sfeiddaelsseedkgektvsiPCksdpdlClqldgWdeetsiPalldgke 60 
                   +id  +l  +e++   t+s+P    + +C+ l +  e+ si a  dg +
  KHJ30345.1 126 LMDIDQEHLGIPETEYAATISMPSTEFKRICVDLIALSESVSIEASKDGVK 176
                 56899***************************************9988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       608  (0.0339115); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 1927.22
//
Query:       KHJ30346.1  [L=412]
Description: putative RfeD protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        6.7    6.8  12.2         24    5.0  12.2    1.9  1  zf-RING_5  zinc-RING finger domain


Domain annotation for each model (and alignments):
>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0  12.2    0.0013        24       2      43 ..     353     397 ..     352     398 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0013
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll...ekeavCpiCr 43 
                 C  C+      + +  t+C   +Ce+C++ l+   +++++Cp C 
  KHJ30346.1 353 CAACHGLSLLGQSYACTECICGICETCVDALManyGARRKCPKCA 397
                 6666665555667889999999**********************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1000  (0.0557756); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3093.34
//
Query:       KHJ30347.1  [L=121]
Description: hypothetical protein EV44_g3424 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       340  (0.0189637); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 867.23
//
Query:       KHJ30348.1  [L=333]
Description: putative thioesterase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-09   35.9   0.1    1.1e-08   35.3   0.1    1.3  1  4HBT      Thioesterase superfamily


Domain annotation for each model (and alignments):
>> 4HBT  Thioesterase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.1   6.2e-13   1.1e-08       2      57 ..     224     278 ..     223     279 .. 0.91

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 6.2e-13
                 SSB-HHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEEEEESS-BBTTCEEEEEEEEE CS
        4HBT   2 GvvhgGvylallDeaagaalrslggrgilvvvvelsidflrpvrlgdeltvearvl 57 
                 Gv hgGv+++llDe++g ++++   + +  v+++l++++l+p+      +++a+v+
  KHJ30348.1 224 GVAHGGVLATLLDETLGRCAMGFLEG-STGVTANLQVNYLKPILTNGFYVIRASVE 278
                 99***********************8.***************87777777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2491.65
//
Query:       KHJ30349.1  [L=285]
Description: putative fmn-binding split barrel-related protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      6e-41  140.2   0.0    1.6e-39  135.6   0.0    2.0  1  Pyrid_oxidase_2  Pyridoxamine 5'-phosphate oxidase


Domain annotation for each model (and alignments):
>> Pyrid_oxidase_2  Pyridoxamine 5'-phosphate oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.6   0.0   8.7e-44   1.6e-39       1     169 [.      42     251 ..      42     252 .. 0.85

  Alignments for each domain:
  == domain 1  score: 135.6 bits;  conditional E-value: 8.7e-44
                      --TT-HHHHHHHHHHH-SEEEEEEE....--SGG..............................GTTSEEEEEEE-BSSSTT---S--EEEE-T CS
  Pyrid_oxidase_2   1 ptaeeaAavARtlvhreslgtlsTi....sttkd..............................iegapfanvvsisdgaaddstGnpylllvd 60 
                      pt +e+A +AR++++ ++l+t sTi    s   +                              ++++p++++++++   +++ +Gnp++l ++
       KHJ30349.1  42 PTPQESAVLARRILRLTPLATFSTIfpsiS---QsnassskesfsqkalhayhvypveehrpqrLDNTPIGLIEYVA---DCEVSGNPTILAIN 129
                      7899*********************76442...1244566778889999999999999999999************8...699*********** PP

                      TSHHHHHHHH--EEEEEEEGGG..........SSHHHHHT--TTSTTS-EEEEEEEEEE--TTTHHH..HHHHHHHH-GGGGGS-GG...G--E CS
  Pyrid_oxidase_2  61 idstaqniqknsklsltiseeq..........tptckkkkvdpesptcarvsltGklekveseekkl..aekcllsrHpdakkWlpgnsihksh 142
                      i +t++n++++s++s+++s+++          ++ ++    + + ++++r+ l+G le+++++e++   +e+c+l++H dak Wlpgn+ih s+
       KHJ30349.1 130 IATTFRNVAAGSNVSISFSWTPpplspwsniiSNIQR--TSSYSAANLPRFALFGFLERIDPDEVEElsIEECFLKTHSDAKRWLPGNRIHTSK 221
                      **********************665555433311111..2222333688************888777567************************ PP

                      EEEEEEEEEEEE-SSSS-EEE...-HHHHH CS
  Pyrid_oxidase_2 143 fvkLeveeiylvggFGdrayi...daeeYl 169
                      + +++ve+iy+vggFGdrayi   +++ + 
       KHJ30349.1 222 WQRFVVENIYWVGGFGDRAYIgwiPVDLWK 251
                      *********************999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       329  (0.0183502); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2057.48
//
Query:       KHJ30350.1  [L=352]
Description: putative er membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.4e-122  408.5   9.2   3.8e-122  408.3   9.2    1.0  1  ICE2      ICE2


Domain annotation for each model (and alignments):
>> ICE2  ICE2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  408.3   9.2  2.1e-126  3.8e-122      79     405 ..       2     335 ..       1     336 [. 0.92

  Alignments for each domain:
  == domain 1  score: 408.3 bits;  conditional E-value: 2.1e-126
        ICE2  79 srfseda....skveetllevkslseyl.......eklvvkpWkklLsnstpvftllEGfcslLvIQaigqitrwlvnrkrsdswlilllvlsgsvits 166
                 ++f++da    ++v++++ ++ + s  l       e l+v++W+klL++s ++f+l+EGfcslL+IQa+gqitrwlvn+ rsdsw+i+llv+s+s+i+s
  KHJ30350.1   2 NQFATDAngsgDWVARSFERKRISSLSLlgsgglvEVLTVGTWDKLLQYSKSIFQLAEGFCSLLAIQAAGQITRWLVNKGRSDSWMITLLVFSASIISS 100
                 67777755667788888777743333334556666999************************************************************* PP

        ICE2 167 alYfLyriyvfpeisvvdasllGvtltlvvflglyGivsgkGsviEsSLlfaYivlciYeifpdlsesateellellkettqneqkelpklppiilasi 265
                 ++YfL+ri +fpeis+vdasl+G+++t++vfl+++Gi+sg+G+++EsSLlfaY+vlciY+if+d+ + + +e+      t+  +q+e+p++pp+i+as+
  KHJ30350.1 101 SVYFLWRISNFPEISNVDASLIGAAVTCAVFLCAWGIGSGRGNPVESSLLFAYVVLCIYQIFTDYLPISDSEI------TEPITQAEFPPFPPMIMASY 193
                 *********************************************************************9887......5677889************* PP

        ICE2 266 skllkslssslpsslkeileflkaaietitpsvlisLayRilvfYaatrIiPalresgaralsq.peledsekaskilkllylyspciliavYthLllq 363
                 s++l ++s+ lps++ + ++fl aa++++tps+lisLayRilvfYaatrIiPa+resga+a+s+ p+l++s  + ++l+ll+++sp+il+avYt+Ll+q
  KHJ30350.1 194 STILYMMST-LPSAVLSSFDFLFAAFQAVTPSILISLAYRILVFYAATRIIPAIRESGAQAFSEePNLKESGGTVNFLGLLSWFSPSILVAVYTSLLMQ 291
                 ********9.***************************************************9999********************************** PP

        ICE2 364 ysgelkkelklwglesivveswk..fwnWvnifltlllYavELi 405
                 +++ +++e++  +++++     +  +w+W+n+++t++lYa+EL+
  KHJ30350.1 292 HFSVTSAENNPTKWWEMQGGNSSgnIWRWINVTATMALYALELY 335
                 ********98888888664443355******************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       484  (0.0269954); expected 358.6 (0.02)
Passed bias filter:                      249  (0.0138881); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2508.15
//
Query:       KHJ30351.1  [L=357]
Description: putative myg1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.7e-131  436.6   0.0   7.7e-131  436.4   0.0    1.0  1  UPF0160   Uncharacterised protein family (UPF0160)


Domain annotation for each model (and alignments):
>> UPF0160  Uncharacterised protein family (UPF0160)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  436.4   0.0  4.3e-135  7.7e-131       1     317 []      22     355 ..      22     355 .. 0.98

  Alignments for each domain:
  == domain 1  score: 436.4 bits;  conditional E-value: 4.3e-135
     UPF0160   1 kigTHngkFhaDevlAvalLrllpeykdaelvRtrdpevleecdivvDVggvyDpakkryDHHqrefnetfsekaktklSSaGLvYkhfgkeiikkllk 99 
                 +igTHng FhaDe+lAv++Lrllp y++++l+Rtrd++ l++c++vvDVgg+y p+k+r+DHHqr+fn tf+++ +tklSSaGLv+ hfgk+ii++++ 
  KHJ30351.1  22 TIGTHNGCFHADEALAVYMLRLLPFYNNSQLIRTRDSTLLSTCHTVVDVGGEYCPEKNRFDHHQRGFNITFPNR-STKLSSAGLVFLHFGKAIIAQHIG 119
                 69**********************************************************************98.7*********************** PP

     UPF0160 100 leldeeevellyeklyeefveaiDaiDnGisvyee.......vekkykikt.slssrvgrlnpewne......eekeedederFekAselvgeeflekv 184
                 +++++e+v++++ek+y++fvea+Da+DnGisvy++        ekk+++++ +l ++v+rlnp+wn+      e++++ ede+F +As+ +geef +++
  KHJ30351.1 120 VSESAEDVQIIWEKIYTSFVEALDAHDNGISVYDAkeiaaagLEKKFSDSGfTLGAMVARLNPNWNDpipsdpERAQQIEDEKFLTASSRMGEEFYRTL 218
                 **********************************99************************************9999*********************** PP

     UPF0160 185 kylakswlpareivkealekrkevdesgrilvlees.vpwkehllelekelkiekkvlyvlyed...eeekwrvqavpvskesfesrkpLpeeWrGlrd 279
                 +y++ksw+par++v++a++kr e+d +grilvle + vpwk+hl++le +++ie+++lyvly++    ++kw++q+vp+sk+sf+srkpLpe+WrG rd
  KHJ30351.1 219 DYFSKSWIPARQVVHKAFSKRLEYDTKGRILVLEGQsVPWKDHLYDLEMQEGIESRILYVLYPErptVDSKWKIQCVPESKDSFQSRKPLPEAWRGYRD 317
                 *********************************6555*************************9878889****************************** PP

     UPF0160 280 eeLsevsgiegavFvHasgFiggnktkegalemAkkaL 317
                 e+L+evsgi+++vFvHa+gFiggnkt++g++ mA kaL
  KHJ30351.1 318 EKLDEVSGIPNGVFVHAAGFIGGNKTYKGVMDMAIKAL 355
                 ***********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       317  (0.0176809); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2739.57
//
Query:       KHJ30352.1  [L=141]
Description: putative camp-regulated phosphoprotein family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.4e-28   96.7   0.0    1.1e-27   96.0   0.0    1.4  1  Endosulfine      cAMP-regulated phosphoprotein/endosulfine co
  ------ inclusion threshold ------
      0.059   13.4   0.0       0.14   12.3   0.0    1.6  2  Peptidase_M24_C  C-terminal region of peptidase_M24


Domain annotation for each model (and alignments):
>> Endosulfine  cAMP-regulated phosphoprotein/endosulfine conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.0   0.0   1.2e-31   1.1e-27       1      75 [.      10      83 ..      10      88 .. 0.92

  Alignments for each domain:
  == domain 1  score: 96.0 bits;  conditional E-value: 1.2e-31
  Endosulfine  1 dlsklspeelklyklyGkLPtkkdllskklqeRkYFDSgDYAlskagvaksqkaktglgskhPspertpeikqrs 75
                 d+s+++p+e++l++lyGkLP+++d lsk+l+eRkYFDSgDYAlskag+a+s   ++++gs+hP pe++p+++++ 
   KHJ30352.1 10 DVSSMTPDEQRLFRLYGKLPSTSDHLSKHLKERKYFDSGDYALSKAGKASS-VDTGSVGSEHPVPENIPHLSSPI 83
                 789*********************************************765.5569**************98765 PP

>> Peptidase_M24_C  C-terminal region of peptidase_M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.5e-05      0.14      12      49 ..       3      42 ..       1      54 [. 0.87
   2 ?   -2.5   0.0      0.61   5.5e+03      51      60 ..     113     122 ..     101     123 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.5e-05
                     ---STT--GGGS-HHHHHHHHHHHH..HHHHHHHHHHHHT CS
  Peptidase_M24_C 12 PidrklIdvslLtpeEiawLnaYha..kvreklsplLeee 49
                     P++ k +dvs +tp+E + +  Y +     ++ls++L+e+
       KHJ30352.1  3 PYQMKKVDVSSMTPDEQRLFRLYGKlpSTSDHLSKHLKER 42
                     9**********************98778999999999765 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.61
                      H.HHHHHHHT CS
  Peptidase_M24_C  51 eeleWLkraT 60 
                      +e  +L+r+T
       KHJ30352.1 113 KESSFLNRET 122
                      4568899988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      225  (0.0125495); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.26s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 1059.47
//
Query:       KHJ30353.1  [L=354]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.21   12.0   0.1       0.37   11.2   0.1    1.4  1  Uteroglobin  Uteroglobin family


Domain annotation for each model (and alignments):
>> Uteroglobin  Uteroglobin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1     2e-05      0.37       3      49 ..      26      70 ..      24      77 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2e-05
                 XXXXXXXXXXXXXXXXXXX---HHHHHHHHHHHHS-HHHHHHHHHTT CS
  Uteroglobin  3 lavvllLvalaLccyagsaegCpaleevvekflegseeeYkeeLqky 49
                 l++ l+Lv+l  cc++ +  + +a+e+ ++ +l g +++++++L  +
   KHJ30353.1 26 LSSYLVLVTLSTCCFRHT--ATNAVEDSLSPMLIGGNKSFVDSLRVF 70
                 7899*************9..99**********999999999999766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       452  (0.0252106); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2731.58
//
Query:       KHJ30354.1  [L=497]
Description: hypothetical protein EV44_g4977 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.1e-09   36.0   0.1    4.5e-07   30.1   0.1    2.3  1  RNase_H   RNase H


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.1   2.5e-11   4.5e-07       3     142 ..     298     422 ..     296     423 .. 0.66

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 2.5e-11
                 SEEEEEEEEEECTTTCE.EEEEEECTT.....EEEEEEEC...CCCHHHHHHHHHHHHHHHTT.SCSEEEEEES-HHHHHHHHCCCHHHHHTTSSSETT CS
     RNase_H   3 avvvYtDGsclgnpgeg.gagavlykeg...arnisaple...eaqtnnraELsAvieaLkalksdekvniytDSkYvvkgitqwvhrwkknawkttse 94 
                 a ++YtDGs  ++ g+g  +g+v+y      a+ +s++l    + +++ +  +   i+ Lk+ +s+ k  i++DS+ ++  i++            +++
  KHJ30354.1 298 ASIIYTDGS--RTIGKGsSIGFVIYLPYtreAKFYSFNLGdgvGITDAETYCILKSIKTLKNISSSRKCYIFSDSQAALLRIKN------------ANN 382
                 679******..44444448999776554333445566666333455555555555566666556779999*****655442222............222 PP

                 SSBHTTHHHHHHHHHCHCSSEEEEEE-SCCSSSTHHHHHHHHHHHHHH CS
     RNase_H  95 qkpvknkdlaellkelakkkkvqlkwvkgHaGvpkgNemaDrlAkeaa 142
                           ++++++a++ +++++w++gH G+ +gNe a  lA+++a
  KHJ30354.1 383 -------YFCHQIRRHAHNYQISMEWCPGHIGI-EGNEIAHGLARKGA 422
                 .......2233344567999*************.7***********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (497 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3474.47
//
Query:       KHJ30355.1  [L=1272]
Description: putative dshct domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.1e-48  163.1   1.2    9.8e-48  161.9   0.5    2.0  2  DSHCT           DSHCT (NUC185) domain
    1.4e-39  135.0   0.1      3e-38  130.7   0.2    2.3  2  Ski2_N          Ski2 N-terminal region
    2.5e-23   83.4   0.6    4.6e-23   82.5   0.2    1.7  2  rRNA_proc-arch  rRNA-processing arch domain
      2e-18   66.8   0.0    7.7e-18   64.9   0.0    2.0  2  DEAD            DEAD/DEAH box helicase
    1.7e-06   28.3   0.0    1.2e-05   25.6   0.0    2.5  1  Helicase_C      Helicase conserved C-terminal domain
    1.6e-05   25.0   0.0    4.5e-05   23.5   0.0    1.8  1  ResIII          Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.093   13.0   0.1       0.56   10.5   0.0    2.3  2  AAA_22          AAA domain


Domain annotation for each model (and alignments):
>> DSHCT  DSHCT (NUC185) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       1.3   3.2e+03      44      83 ..     611     652 ..     610     673 .. 0.70
   2 !  161.9   0.5   3.8e-51   9.8e-48       3     162 ..    1096    1265 ..    1094    1268 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.3
       DSHCT  44 salvfeekredeeekepkl.seeleealeel...keiaeriakv 83 
                 +++vf +kr +e+++  +l ++++++a e+    + i+++ia++
  KHJ30355.1 611 CIFVFSKKRCEENAD--ALsNQDFSTATEKSaihMTIEKSIARL 652
                 789999999887775..776778888776544456666666655 PP

  == domain 2  score: 161.9 bits;  conditional E-value: 3.8e-51
       DSHCT    3 tvtlkGrvaaeirsedeLlltellfsgvlddlepeelaAllsalvfeekredeeekepklseeleealeelkeiaeriakvs..............v 85  
                  +v+lkG++a+ei+s+deL+ltel+++++l  +ep+e +Allsa+vf+ek++      p+ls +le+ ++++  i e++++ +              +
  KHJ30355.1 1096 RVQLKGKLACEIHSADELVLTELILDNILAAYEPAETVALLSAFVFQEKTNV---I-PNLSVNLERGMKTIIRISEKVNERQtyhqvilssddsndF 1188
                  79**********************************************9644...2.7889999999998888888888766788888999****96 PP

       DSHCT   86 esrldlglvevvyaWakgasfaellektdldeGdiVRllrrleellrqlakaakvigneeLkkkaeeaielikRdiV 162 
                    r ++gl+evvy+Wa+g+sf+++++ td+ eG+iVR+++rl+e++r++++aa++ig++eL+ k++ ++e+ikRdi 
  KHJ30355.1 1189 LARSRFGLMEVVYEWARGMSFKNITNLTDVLEGTIVRVITRLDETCREVKNAARIIGDPELYTKMQTCQEMIKRDIT 1265
                  6678***********************************************************************95 PP

>> Ski2_N  Ski2 N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.7   0.2   1.2e-41     3e-38       2     132 ..      66     209 ..      65     213 .. 0.87
   2 ?    1.5   0.0     0.092   2.4e+02      96     127 ..    1180    1211 ..    1163    1217 .. 0.79

  Alignments for each domain:
  == domain 1  score: 130.7 bits;  conditional E-value: 1.2e-41
      Ski2_N   2 klqthwdrkkdyksllkippsasrtslefkRkgleGkivgykevslveasnataknSlSlsRkpgpksdfvrGsssnlpFaPGGle.eevlk...dse. 95 
                 +lq +w++++dy+sl++i p++srt ++f+R+gleG+++gykev +v+a++ taknS+Sl Rkpg k +fvrG ++++pFaPGGle  e+++   d + 
  KHJ30355.1  66 ELQLRWETSTDYNSLFQIAPTQSRTITRFIREGLEGRVIGYKEV-TVNANSITAKNSTSLLRKPGRKDEFVRGAAGFFPFAPGGLEgVEAVAaleD-Qa 162
                 5799****************************************.9****************************************8565553423.26 PP

      Ski2_N  96 ........kaseseekllhr..dekglltippGfsrGldfkedeeee 132
                         + +e++ +++++  +e++lltippGf+rG df+ +++++
  KHJ30355.1 163 fintsttkNHTENKLERVIKlsSEGSLLTIPPGFKRGGDFSLNSSKD 209
                 99999887666667777654338**************9998777666 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.092
      Ski2_N   96 kaseseekllhrdekglltippGfsrGldfke 127 
                   +s++++++l r++ gl ++   + rG++fk+
  KHJ30355.1 1180 LSSDDSNDFLARSRFGLMEVVYEWARGMSFKN 1211
                  4556668999********************97 PP

>> rRNA_proc-arch  rRNA-processing arch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.5   0.2   1.8e-26   4.6e-23       1     269 [.     806    1068 ..     806    1069 .. 0.75
   2 ?   -3.4   0.0       2.8   7.2e+03      54     126 ..    1170    1233 ..    1148    1250 .. 0.66

  Alignments for each domain:
  == domain 1  score: 82.5 bits;  conditional E-value: 1.8e-26
                      HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHTC--TT....HHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHGGG--TTEEEEEEETTTEEE CS
  rRNA_proc-arch    1 EyMlerSFsqfqnqkslpelekklkeleeelksitied....eedieeyyklrqqleelreeirkiltkpknilpfLqpGRlvrvksnddldf 89  
                      E+M++rSFs++++q+ lpe+ek++k  ee+l++i+ +       d++ ++++ q++ ++++e+++ l+  + + +++ p  l++  + +    
      KHJ30355.1  806 EEMIKRSFSEHATQQLLPEHEKAVKISEEDLNKIKRDSceicDTDLDACHEAVQTYRSITAEFYHRLLLTPIGRRMFAPKKLIVYLK-E-GIR 896 
                      9********************************99775889977**************************************99984.3.233 PP

                      EEEEEEEEEE-SSST.TB---TCTTEEEEEEEEEEETTS-G.GG--TT--S--TT--B.......-TT..S-EEE.EEEEEEGGGEEEEEEEE CS
  rRNA_proc-arch   90 gwGivlnfkkrnknskeeeasdeesyvVdvllvlsenskrk.dedgekseesaeelkP.......kagdrekgev.evvpvplkcieaiSsvr 173 
                        Gi+l+   + +++   +a       V vl      ++r+ +           ++ P       k +++ k  + + +++++++ie++++  
      KHJ30355.1  897 TPGILLKEG-S-SGG---AA-----PTVHVLEIRTNRDARDsT--------DLLPYMPkyrklftKLPQNIKWFHvKTLQISVSSIECLTKTT 971 
                      6******84.2.111...11.....234454332222222221........222233333334433334445544599999999********* PP

                      E---SS...TTST....THHHHHHHHHHHHHHHSS---B--TTTTS----HHHHHHHHHHHHHHHHHHTSGG.GSSSHHHHHHHHHHHHHHHH CS
  rRNA_proc-arch  174 lklpkd...lrks....eareevakavqelkrrfpgiplldpikdmkikdeefkkllkkiealesrlaknpllhspnleelyalyekkvalqe 259 
                      l+   +     ++     a++++ k  q+ ++        d ++ +kikd  +++ll+k+e+l +  +k++ l++p++ +++a++++++ ++e
      KHJ30355.1  972 LNGVIPeifG-TAeeyyRAKDQLFKICQNWES-----TDWDEVDWLKIKDVYLRELLNKREELSEIAQKSKALTCPQFISHFAMCNDQWLIKE 1058
                      *955554452.331123444444444444444.....36788899***************************9******************** PP

                      HHHHHHHHHH CS
  rRNA_proc-arch  260 eikelkkeis 269 
                      +i++l+k +s
      KHJ30355.1 1059 NISQLRKLMS 1068
                      ******9887 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.8
                      HHHHHHHHHHCSHHHHGGG--TTE..EEEEEETTTEEEEEEEEEEEEE-SSST.TB---TCTTEEEEEEEEEEET CS
  rRNA_proc-arch   54 elreeirkiltkpknilpfLqpGR..lvrvksnddldfgwGivlnfkkrnknskeeeasdeesyvVdvllvlsen 126 
                      + r++++++++++  +  fL   R  l  v+      ++w+  ++fk+      ++ ++  e  +V+v+++l+e+
      KHJ30355.1 1170 NERQTYHQVILSSDDSNDFLARSRfgLMEVV------YEWARGMSFKNI-----TNLTDVLEGTIVRVITRLDET 1233
                      5678888888888888888887773333333......446666666411.....112233333667777666655 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.9   0.0     3e-21   7.7e-18       3     172 ..     318     464 ..     316     467 .. 0.88
   2 ?   -3.5   0.0         3   7.6e+03     119     150 ..     769     799 ..     759     806 .. 0.85

  Alignments for each domain:
  == domain 1  score: 64.9 bits;  conditional E-value: 3e-21
                 HHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   3 iQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdiv 101
                  Q+eai  +  g++v+vaa+T +GKT ++  ++   +    +k+ +ka++ +P ++L +q ++++++++++i+     ++g+v+   +       + ++
  KHJ30355.1 318 FQKEAIYRLECGDSVFVAAHTSAGKTVVAEYAIA--L---ATKHMTKAIYTSPIKALSNQKFRDFREVFDEIG----ILTGDVQIAPE-------ASCL 400
                 79**************************999999..4...2588889***********************877....34566666544.......5556 PP

                 EEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 102 vgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkd 172
                 ++t++ l ++l +g   +++v+f+++DE++ + d +++  +++++  l       +++ ++i+lSAT+p++
  KHJ30355.1 401 IMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDLERGVVWEEVIIML-------PEHVTLILLSATVPNT 464
                 99*******998888779******************************.......56677********965 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 3
                 CTTEEEEEEETHHHHHHTTTHHHHHHHHHHSH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 119 lsqvrflVlDEadrlldqgfsdfinrilnqlp 150
                 ++++r ++l E  +l +q f+ ++n iln l+
  KHJ30355.1 769 INDLRHMILGEPSKLRSQ-FRLTYNMILNLLR 799
                 578999999999999999.9999999999874 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   4.6e-09   1.2e-05      40     111 .]     670     749 ..     593     749 .. 0.76

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 4.6e-09
                 TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS.......SS..HHHHHHHHTTSSSTT CS
  Helicase_C  40 gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp.......rn..vtsyiqriGRtgRag 111
                    +av+hg l    +e +   f +  ++vL at   ++G+++p  ++V+  ++        rn  +++y q++GR+gR g
  KHJ30355.1 670 TRGIAVHHGGLLPIVKEIVEILFAQTLVKVLFATETFAMGLNLPTRTVVF-SGYRkhdghkfRNllPDEYTQMAGRAGRRG 749
                 567888999999999999999999999*****************665555.4544355555566677************75 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   1.8e-08   4.5e-05       3     170 ..     314     462 ..     312     463 .. 0.83

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 1.8e-08
                 EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--..... CS
      ResIII   3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekds 101
                 el + Q+eai +l+          +++++ T +GKT+va  +i+  +k+    k++   p k+l +q  ++f+++++e      ++++gd ++a     
  KHJ30355.1 314 ELDSFQKEAIYRLE------CGDSVFVAAHTSAGKTVVAEYAIALATKHM--TKAIYTSPIKALSNQKFRDFREVFDE-----IGILTGDVQIA----- 394
                 56667777777774......3457889999*********77777777654..59**********************96.....699******99..... PP

                 ..-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.T...TTHHHHHT-.--SEEEEEESS-S CS
      ResIII 102 tnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakk...swreilekf.keavllglTATpe 170
                  +++ l++t++ l + +     ++   l    +++i+DE+H +++ +    w+e++ ++ ++ +l+ l+AT +
  KHJ30355.1 395 PEASCLIMTTEILRSML-----YRGADLIRDVEFVIFDEVHYVNDLErgvVWEEVIIMLpEHVTLILLSATVP 462
                 89999999999999999.....77888888888************86788****87776256999999***75 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       4.7   1.2e+04      54      65 ..      57      68 ..      33     100 .. 0.51
   2 ?   10.5   0.0   0.00022      0.56       8     116 ..     332     448 ..     329     461 .. 0.64

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 4.7
      AAA_22 54 kdllrellralg 65
                +++ +ell++l+
  KHJ30355.1 57 SSFSKELLQELQ 68
                222222222222 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00022
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka.........erlsseellealeqalraraviellii 97 
                 ++v +++ +GKT++++     ++++   +   +++     ++  + ++++ e+   +g    +            ++e l+++l++ ++  +++e++i 
  KHJ30355.1 332 VFVAAHTSAGKTVVAEYAIALATKHMTKAIYTSPIKALSNQKFRDFREVFDEIGILTG----DvqiapeascLIMTTEILRSMLYRGADLIRDVEFVIF 426
                 5677888899****99999999765333223333333333333344444444444444....3455577777667777777888888777777****** PP

      AAA_22  98 DEaqhlr...seealeeLrsll 116
                 DE+++++   +  ++ee+ ++l
  KHJ30355.1 427 DEVHYVNdleRGVVWEEVIIML 448
                 ******8775577777776555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.83u 0.27s 00:00:01.10 Elapsed: 00:00:00.43
# Mc/sec: 8793.28
//
Query:       KHJ30356.1  [L=586]
Description: putative serine threonine protein phosphatase 2b catalytic subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-35  122.9   0.1    3.9e-35  122.2   0.1    1.3  1  Metallophos  Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.2   0.1   2.2e-39   3.9e-35       2     203 ..     124     324 ..     123     325 .. 0.93

  Alignments for each domain:
  == domain 1  score: 122.2 bits;  conditional E-value: 2.2e-39
                  EEEEEESBTBTTCCTHHHHHHHHHHHHHHH.TTESEEEEESTSSSSS..HHHHHHHHHHHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddllre.ekpdlvllaGDlvdrg..dlekellellaalvkypipvylllGNHe........gfeeellnkygyl 88 
                  +i+v+gD+H     gq++dl+kl++   ++ e ++l+l  GD+vdrg  ++++ +l+l++ ++ +p+ ++ll+GNHe        +f+ e+++ky   
   KHJ30356.1 124 PITVCGDVH-----GQYYDLMKLFEVGGDPaETRYLFL--GDYVDRGyfSVDC-VLYLWSLKIWFPNTLWLLRGNHEcrhltdyfTFKLECKHKYS-- 211
                  79*******.....**********9884444799****..*******666666.6666*********************99999999899999999.. PP

                  HHHHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEETHHHHHHHHHHHSCHHHHCC...HHHHHH.HHHHTTCSEEEEEESSESSCSSSCSCCH CS
  Metallophos  89 gifsepwrsdaevfnnlplaslgsgslkvlllhGg.spellvsldklgslnleleapepg...dewlkd.lekrekadwvivlgHsplyrgsgylfgd 181
                      ++++ + e f +lpla+ +++  ++l++hGg spel ++l++ +++++++e+p++g   d++++d le++++ ++   + H  +  g++y f++
   KHJ30356.1 212 ---EKIYEACMESFCALPLAAVMNK--QFLCIHGGlSPEL-HTLEDFKQIDRFREPPTHGlmcDLLWADpLEEFGQEKTSEYFIHNHVR-GCSYFFSY 302
                  ...799*******************..********88888.****************************99999999999999999999.******** PP

                  HHHHHHHHHTTESEEEEESSSS CS
  Metallophos 182 ealedllkkygvdlvisGHtHv 203
                  +a++++l+k+++  +i++H+ +
   KHJ30356.1 303 PAACNFLEKNNLLSIIRAHEAQ 324
                  *******************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (586 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4110.39
//
Query:       KHJ30357.1  [L=642]
Description: putative familial paroxysmal dyskinesia fpd1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (642 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       819  (0.0456802); expected 358.6 (0.02)
Passed bias filter:                      611  (0.0340789); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.26s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 4290.91
//
Query:       KHJ30358.1  [L=272]
Description: putative ww domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-07   31.7   0.9    2.6e-07   30.6   0.9    1.7  1  WW        WW domain
     0.0023   18.3   0.8      0.013   15.9   0.1    2.3  3  WRW       Mitochondrial F1F0-ATP synthase, subunit f
     0.0083   16.0   0.0       0.02   14.8   0.0    1.6  2  SpoIIIAH  SpoIIIAH-like protein


Domain annotation for each model (and alignments):
>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.9   4.4e-11   2.6e-07       3      31 .]      84     112 ..      82     112 .. 0.96

  Alignments for each domain:
  == domain 1  score: 30.6 bits;  conditional E-value: 4.4e-11
                 TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW   3 pGWeeqwdpdsGrvYYyNheTgetqWekP 31 
                 +GW  +wd++ + +Y+yN +Tg +qW+ P
  KHJ30358.1  84 DGWAPIWDKSAQGFYFYNRFTGASQWTNP 112
                 7**************************99 PP

>> WRW  Mitochondrial F1F0-ATP synthase, subunit f
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.28   1.7e+03       8      25 ..      89     106 ..      85     111 .. 0.84
   2 !   15.9   0.1   2.1e-06     0.013       7      27 ..     147     167 ..     144     174 .. 0.89
   3 ?   -3.6   0.0       2.5   1.5e+04      53      67 ..     189     203 ..     181     210 .. 0.67

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.28
         WRW   8 eYnpkvhGpYdparyYgk 25 
                  +++   G Y+  r+ g 
  KHJ30358.1  89 IWDKSAQGFYFYNRFTGA 106
                 599999*******99886 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 2.1e-06
         WRW   7 keYnpkvhGpYdparyYgkkd 27 
                 + Ynp++hG Ydp+ +Y+++ 
  KHJ30358.1 147 PGYNPAIHGDYDPTAWYAQPA 167
                 57***************9975 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 2.5
         WRW  53 agalsrafwRwqhky 67 
                 ++a++r+  R+q+  
  KHJ30358.1 189 TAAFNRFTGRFQNPE 203
                 456777777777655 PP

>> SpoIIIAH  SpoIIIAH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   3.3e-06      0.02      47     139 ..      27     223 ..       3     241 .. 0.78
   2 ?   -2.6   0.1      0.68     4e+03      73      73 ..     247     247 ..     215     266 .. 0.41

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 3.3e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX............................................................ CS
    SpoIIIAH  47 ddkekdessaasaeaesssetesesseksdiassdedeade.......................................................... 87 
                 + ++  +s++++ e+ ++++++s +  ++d+++ de +++                                                           
  KHJ30358.1  27 S-NSRGSSEEGEIEDYQDTKDNSVEPGNTDDKKRDESTENSnpplpsepppgttqevddgwapiwdksaqgfyfynrftgasqwtnprvpeasaqvtsl 124
                 2.2233333333333444444444444444433333333335888888888899999****************************************** PP

                 ................................................XXXXXXXXXXX--HHHHHHHHHHHHHHHHHHHHHHHHT-TTS-HHHHHHHH CS
    SpoIIIAH  88 ...............................................ltsetasaaasasdyfaeakleReqkrsknketLqeiinnenlseeekqeAq 139
                                                                ++++t +++++ + y+a+a  +R + r +n e   e  n+en+s+ + +++ 
  KHJ30358.1 125 gppgddissranpidnppavikpgynpaihgdydptawyaqpaqedsTQDSTFQNSDARDHYIATAAFNRFTGRFQNPEITPENFNDENKSKRQMNAYF 223
                 **********************************************9888888999999********************************99987765 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.68
                 X CS
    SpoIIIAH  73 e 73 
                 +
  KHJ30358.1 247 S 247
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       936  (0.0522059); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1907.36
//
Query:       KHJ30359.1  [L=175]
Description: hypothetical protein EV44_g2293 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1310.82
//
Query:       KHJ30360.1  [L=263]
Description: putative benzoylformate decarboxylase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-24   85.6   0.4    4.7e-24   85.1   0.4    1.2  1  Voldacs   Regulator of volume decrease after cellular swellin


Domain annotation for each model (and alignments):
>> Voldacs  Regulator of volume decrease after cellular swelling
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.1   0.4   2.6e-28   4.7e-24       1     118 [.      76     186 ..      76     205 .. 0.89

  Alignments for each domain:
  == domain 1  score: 85.1 bits;  conditional E-value: 2.6e-28
     Voldacs   1 gdLyvtesrllwvsekansgisipypsIalHAiqrdkk...deqeepclyvqldeeldesdnkeseegededdneededeeessveltlvPknae...e 93 
                 ++L+v +++l+++++ +  g++ipyp+I+lHAi+++k+   ++qe ++ly+q+             e +d  d e +ed+++ ++ ltl+P++++   +
  KHJ30360.1  76 VELFVCSENLTFFNPSSCIGFAIPYPAITLHAIKTLKDpedSSQEIQGLYMQI-------------EISDYYDHEVQEDDDSGYIDLTLIPSSSSnegK 161
                 79************9899******************99**9999********6.............458889999999999*************66678 PP

     Voldacs  94 tildnifealsacqelhpdpdeedd 118
                 +i++++fea+sac++l+pdp++ed+
  KHJ30360.1 162 SIIQTLFEAVSACSDLNPDPNSEDE 186
                 9********************4443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 1975.04
//
Query:       KHJ30361.1  [L=525]
Description: putative amino acid transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.5e-63  213.3  52.6    6.8e-63  213.0  52.6    1.1  1  AA_permease_2  Amino acid permease
      6e-19   68.0  48.2    7.6e-19   67.6  48.2    1.0  1  AA_permease    Amino acid permease
  ------ inclusion threshold ------
       0.26   11.4   0.4       0.91    9.6   0.1    2.0  2  CDC24_OB1      Cell division control protein 24, OB domain 1


Domain annotation for each model (and alignments):
>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.0  52.6   1.1e-66   6.8e-63       1     423 [.      31     479 ..      31     484 .. 0.87

  Alignments for each domain:
  == domain 1  score: 213.0 bits;  conditional E-value: 1.1e-66
  AA_permease_2   1 lsllsafalvigsv...igsgifvknlaasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkva....flsawfnwfayv 89 
                    ++ ++ +++++++v     +g++ ++++++ggp +++w+w+av ++sl+v++ +aE++s  p  gG+y++++++++k v     +l++w+  ++++
     KHJ30361.1  31 FGRWGMIGFSFSIVtcwSALGGVLVTGVNAGGPPVMIWGWVAVSLVSLCVAYSMAEMCSEYPLAGGQYSWVYILSPKSVRrqlsYLTGWLMIIGIL 126
                    6889**********886335555555999****************************888***************888888888************ PP

  AA_permease_2  90 pvlasilsvaasyl...lnalgpdlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl.stetdt 181
                    ++ a+ + ++a+++   +n+l+p+++ ++w+t+l+a +i+++ ++in  g  +++++ + l i++++  + ++i++ +++ + + +s + ++++ +
     KHJ30361.1 127 AMGATNSFIGANFIlgqANLLNPTYVIERWHTVLVAYFITLFATFINMWGAMILDRVSKGLLIFNVT-AF-VVIVVTILATNSHKQSASfVFQDFQ 220
                    *****999999999777888999*******************************************4.44.4444555555555555445444446 PP

  AA_permease_2 182 ffpngwpgv..llgllivlwsfdGfesaanvseevkk..kdvpkaifigllivlvlyllvniaflgvvpd.deianlsnlgsvaalffeavggkvv 272
                     f++++p++  + g+l+ ++ ++ +++ a++ ee+k   k++p a+++++ i +v ++ + +++ ++++d +++an+ + + ++++ff+ +g+k+ 
     KHJ30361.1 221 NFTGFSPLMagIIGILQPAFGMCCYDAPAHMCEEIKDasKKAPQAMVLSVYIGAVTGFIFLVSVCFCIGDiETVANTPTMVPLIQIFFDSTGSKFT 316
                    89999999867889999*****************9987799*****************************66678877777789************ PP

  AA_permease_2 273 aiivvilialsllgaintavigssrvlealardgvlP..rffakvn.kfgspiraiiltaivslillllfllassaaynfllsvsslgliisylll 365
                    + +++ ++++++lga+n++++  +r l+a++rd++lP  ++++ vn k ++p+ aii+  +v++ +  ++l+ + + +n++ ++++ g+++sy+++
     KHJ30361.1 317 SCLLASFMTIIILGAANALMAEGARSLYAFSRDKGLPfsSYISEVNpKVQIPVTAIIIATVVQMMFNSIYLG-TITGFNTVIAIATEGFYLSYAMP 411
                    ***************************************************************888777765.589******************** PP

  AA_permease_2 366 iigal.ilrkkrphlkr.pgk......ilvaiigalfllfllvalffppkgpatqssliyt.....iiltv 423
                    i+ +l  +  ++ ++ + p++      ilv+++g+ +llf++v+++fp+  p+t+s+++yt     i   +
     KHJ30361.1 412 ILVRLlSHVNDNYREFKgPWAlkpyisILVNAVGLTYLLFACVTFNFPSLYPVTTSNMNYTsaavgI---I 479
                    8888824444444443343334555568*********************************763332...3 PP

>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.6  48.2   1.3e-22   7.6e-19      22     468 ..      57     490 ..      34     496 .. 0.78

  Alignments for each domain:
  == domain 1  score: 67.6 bits;  conditional E-value: 1.3e-22
  AA_permease  22 vlsqaGplgallayllagvviflvmlslgeiatngpksggfytya....srflgpelGfviGlnylfswi..tvlaleltaasiliqfwel..vtdlp 111
                   ++++Gp  ++ +++ + +v+++v++s++e+ + +p +gg y ++     +++ ++l++ +G++ ++ +i  +++++ +++a+ +++ ++l   t ++
   KHJ30361.1  57 GVNAGGPPVMIWGWVAVSLVSLCVAYSMAEMCSEYPLAGGQYSWVyilsPKSVRRQLSYLTGWL-MIIGIlaMGATNSFIGANFILGQANLlnPTYVI 153
                  455667767799****************************99876333379*************.776662267899************885223344 PP

  AA_permease 112 kawvtgavflvvl...liinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkgagfrflgdngsifknnlppgfakeeegafknfisvfv 206
                  + w t++v +++    ++in+ g+    +++  l+++ + a++ +i+v+ il ++ +++ +   +f+ ++ +    n+++       + +++ i+++ 
   KHJ30361.1 154 ERWHTVLVAYFITlfaTFINMWGAMILDRVSKGLLIFNVTAFV-VIVVT-ILATNSHKQSA---SFVFQDFQ----NFTGF------SPLMAGIIGIL 236
                  5555566666555111455666666666666656655555554.33344.45555555555...45555555....88888......66888999999 PP

  AA_permease 207 ivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaaspfvifikesgvsvlaplinaviltaalssa 304
                  + +f++  + + a + +E+kd +k+ P a+   v++ ++   ++l+++ +++++  +   + ++  ++++ if+ ++g+++ + l++ +  + +l++a
   KHJ30361.1 237 QPAFGMCCYDAPAHMCEEIKDASKKAPQAMVLSVYIGAVTGFIFLVSVCFCIGDIETVANTPTM--VPLIQIFFDSTGSKFTSCLLASFMTIIILGAA 332
                  99*************************************9999999999999988766666666..55****************************** PP

  AA_permease 305 nsslysasRvlyslakdglaP...kvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsylrfRkalkyqgr 399
                  n++++ + R ly++++d+ +P    + ++  k + P+ ai++ +++ +++    s++l+  + fn ++ai++  + + + + il  l     l+  + 
   KHJ30361.1 333 NALMAEGARSLYAFSRDKGLPfssYISEVNPKVQIPVTAIIIATVVQMMFN---SIYLGTITGFNTVIAIATEGFYLSYAMPILVRL-----LSHVND 422
                  **********************977778888**********9999888776...666665588999999999999999999998888.....778889 PP

  AA_permease 400 sieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilvgvkl 468
                  +++e++   al p+++ilv a+ +++ll++ ++  ++    p++ +  +  +a +++++f++++ + + 
   KHJ30361.1 423 NYREFKGPWALKPYISILVNAVGLTYLLFACVTFNFP-SLYPVTTSNMNYTSAAVGIIMFIAFITWFTT 490
                  999**************************99998887.4444555555555556666666666666555 PP

>> CDC24_OB1  Cell division control protein 24, OB domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.1   0.00015      0.91      33      48 ..      68      83 ..      59      85 .. 0.91
   2 ?   -1.5   0.0      0.44   2.6e+03      90     116 ..     356     382 ..     341     385 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00015
   CDC24_OB1 33 WsWiasrllklleeYs 48
                W W+a +l++l+ +Ys
  KHJ30361.1 68 WGWVAVSLVSLCVAYS 83
                ***************9 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.44
   CDC24_OB1  90 vtidsiyekkflsldsvleaviidaev 116
                 + i+++  k ++++++++ a+++++ +
  KHJ30361.1 356 SYISEVNPKVQIPVTAIIIATVVQMMF 382
                 557788888999999999999998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (525 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1028  (0.0573373); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.40
# Mc/sec: 3925.00
//
Query:       KHJ30362.1  [L=558]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       688  (0.0383736); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 4085.37
//
Query:       KHJ30363.1  [L=320]
Description: putative 26s proteasome regulatory subunit rpn-8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-35  119.5   0.1    1.6e-34  118.7   0.1    1.4  1  MitMem_reg  Maintenance of mitochondrial structure and functi
    1.2e-30  105.9   0.0    2.1e-30  105.1   0.0    1.4  1  JAB         JAB1/Mov34/MPN/PAD-1 ubiquitin protease


Domain annotation for each model (and alignments):
>> MitMem_reg  Maintenance of mitochondrial structure and function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.7   0.1   1.7e-38   1.6e-34       1     112 []     172     301 ..     172     301 .. 0.95

  Alignments for each domain:
  == domain 1  score: 118.7 bits;  conditional E-value: 1.7e-38
  MitMem_reg   1 Eaeeigvehllkpsiqdas.stlstglnrqyyslkilqerldlikdYlkkveegelpvnheilrnlqkllnllPhlet..................eel 80 
                 Eaeeigvehll+ +i+d + +tlst++++q++sl++l+ rl++i +Yl kv +g lpvnh il nlq+++nllP+l t                  +el
  KHJ30363.1 172 EAEEIGVEHLLR-DIRDVAvGTLSTRITNQLQSLQGLHLRLQDIGNYLHKVLDGSLPVNHVILGNLQDVFNLLPNLFTpkapsassdgydttlksnSEL 269
                 9***********.***************************************************************9977887877777777777777* PP

  MitMem_reg  81 ekefnvetnDvllvvyLasltrsilalnelle 112
                 ++++  +tnD+l+ +yL+sl+r+i+a+++l+e
  KHJ30363.1 270 AHAMGIKTNDQLMAIYLSSLIRAITAFHDLIE 301
                 ******************************86 PP

>> JAB  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.1   0.0   2.4e-34   2.1e-30       5     118 .]      15     124 ..      12     124 .. 0.97

  Alignments for each domain:
  == domain 1  score: 105.1 bits;  conditional E-value: 2.4e-34
                 EEEEEHHHHHHHHHHHHHHHHHT.S--EEEEEEEESSSEEEEEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHCTTSEEEEEEEESSSS-SS-- CS
         JAB   5 avhleslvllkildhalrtekee.eevmGlliGelnddttveitnvfalpfeetekdvdavsldqeylekksellkklrgrervvGWYhshpditvwls 102
                 +v + +lvll+  dh+ r +k++ ++v+G+l+G+ +++ +v++ n+fa+pfee+ekd ++++ld++y+e++++++kk+++re+++GWYhs+p++    +
  KHJ30363.1  15 NVSVAPLVLLSAADHYGRSAKNTrKRVVGVLLGQNDGR-NVRVSNSFAVPFEEDEKDPSVWFLDHNYVESMNDMFKKINAREKLIGWYHSGPKL----R 108
                 799***************9999989*************.*******************************************************....* PP

                 HHHHHHHHHHHHHSTT CS
         JAB 103 evdvrtqalyqrmdee 118
                 ++d+++++l++r++++
  KHJ30363.1 109 ASDLEINELFKRYTPN 124
                 ************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2232.25
//
Query:       KHJ30364.1  [L=276]
Description: putative adenylate kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-59  199.3   0.1    4.5e-59  198.9   0.1    1.2  1  ADK             Adenylate kinase
    4.9e-23   82.1   0.2    9.9e-23   81.1   0.2    1.5  1  AAA_17          AAA domain
    2.6e-15   56.1   0.0    5.4e-15   55.1   0.0    1.6  1  ADK_lid         Adenylate kinase, active site lid
    5.2e-06   27.0   0.0    8.8e-06   26.3   0.0    1.4  1  AAA_18          AAA domain
    1.3e-05   25.3   0.0    2.7e-05   24.4   0.0    1.4  1  AAA_33          AAA domain
  ------ inclusion threshold ------
      0.091   12.5   0.0       0.17   11.6   0.0    1.5  1  Cytidylate_kin  Cytidylate kinase


Domain annotation for each model (and alignments):
>> ADK  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  198.9   0.1   1.5e-62   4.5e-59       1     150 [.      50     236 ..      50     237 .. 0.99

  Alignments for each domain:
  == domain 1  score: 198.9 bits;  conditional E-value: 1.5e-62
                 EEESTTSSHHHHHHHHHHHHTSEEEEHHHHHHHHHHCT-HHHHHHHHHHHTTSS--HHHHHHHHHHHHHCH.GTTTEEEEESB-SSHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK   1 llGaPgaGKGtqaeklvkkyglahlstGdllRaevksgtelGkeakevmdkgelvpdevvvklvkeeleke.dkkkgfllDGfPRtveqaealeellee 98 
                 l+G+PgaGKGtqa+k+++k+g++hl+tGd+lR++v+++t+lG+eak++md+g lv+de+v++++k+ele++ ++k+gf+lDGfPRtv qae+l+++l++
  KHJ30364.1  50 LIGPPGAGKGTQAPKIKEKFGCCHLATGDMLRSQVAKKTQLGNEAKKIMDQGGLVSDEIVIGMIKQELETNeECKRGFILDGFPRTVLQAERLDSMLSK 148
                 79*******************************************************************9989************************** PP

                 HTSEESEEEEEE--HHHHHHHHHT....................................GSHHHHHHHHHHHHHHHHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxx....................................xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK  99 ekvkldlvleldvpeevlveRltg....................................DneetvkkRletykkqtkplidyykkkg 150
                 +++kl+  +el++++++lv+R+tg                                    Dn ++++kRl ty++qt+p+++yy+k+g
  KHJ30364.1 149 RQQKLQSAVELQIDDSLLVSRITGrlihpasgrsyhkifnpprrdmadditgepliqrsdDNVDALRKRLVTYHQQTAPVVQYYQKTG 236
                 *************************************************************************************986 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.1   0.2   3.3e-26   9.9e-23       1     128 [.      51     182 ..      51     186 .. 0.84

  Alignments for each domain:
  == domain 1  score: 81.1 bits;  conditional E-value: 3.3e-26
                 EE-TTSSHHHHHHHHHHHHTEEEEEHHHHHH.HHHHTTTS.HSSHHHHCTSHHHHHHHHHHHHHHHHHHHH.HSSEEEEEE-SEEEETTEEEESSHHHH CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthlsaGdllr.eeakrggl.akardemrklpleekkelqkeaaekiaeea.kkkgvlvdghprikeqagfldglpkev 96 
                 +G+PG+GKgtq+ k++ek+g  hl +Gd+lr ++ak+ +l ++a++ m+++ l+ ++ +  +++++++ ++ +k+g+++dg+pr+  qa+ ld + ++ 
  KHJ30364.1  51 IGPPGAGKGTQAPKIKEKFGCCHLATGDMLRsQVAKKTQLgNEAKKIMDQGGLVSDEIVIGMIKQELETNEeCKRGFILDGFPRTVLQAERLDSMLSKR 149
                 69*****************************5556666886777778889*****************88766999**********************98 PP

                 HHHH..SEEEEEE--HHHHHHHHHHH...TTST-T CS
      AAA_17  97 leelkpdaiilleadpeeilerrlkd...rtrgrd 128
                 +++l  +  + l++d+  +++r   +     +gr+
  KHJ30364.1 150 QQKL--QSAVELQIDDSLLVSRITGRlihPASGRS 182
                 8888..77777888888788887666442356665 PP

>> ADK_lid  Adenylate kinase, active site lid
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.1   0.0   1.8e-18   5.4e-15       1      36 []     173     208 ..     173     208 .. 0.98

  Alignments for each domain:
  == domain 1  score: 55.1 bits;  conditional E-value: 1.8e-18
                 EEE-TTT--EEETTTB--SSTTB-TTT--.-B--GG CS
     ADK_lid   1 RrvCpkCGrsYhvvfnpPkveglCDkCGepLvqRsD 36 
                 R+++p++GrsYh +fnpP+ ++ +D +GepL+qRsD
  KHJ30364.1 173 RLIHPASGRSYHKIFNPPRRDMADDITGEPLIQRSD 208
                 99**********999********************9 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.0   2.9e-09   8.8e-06       2     117 ..      49     177 ..      48     188 .. 0.73

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 2.9e-09
      AAA_18   2 lltGtpGvGKttlakeLskrlgf.....gvnlrdvakenglllevdpe....aldeskrldedkldklldaleenssaleegknlvidghlaeleseaa 91 
                 +l G+pG+GK t a  ++++ g+     g+ lr+ ++++  l  + ++        s+++++++ ++ l+++ee+          ++dg++   +++++
  KHJ30364.1  49 ILIGPPGAGKGTQAPKIKEKFGCchlatGDMLRSQVAKKTQLGNEAKKimdqGGLVSDEIVIGMIKQELETNEEC------KRGFILDGFPRTVLQAER 141
                 799*****************9999888866665544444333333333444333444444444444444444444......3467**********9999 PP

      AAA_18  92 kdikk..........vvLtaspeelleRlekRgyee 117
                  d             v L+ +++ l  R+  R  ++
  KHJ30364.1 142 LDSMLskrqqklqsaVELQIDDSLLVSRITGRLIHP 177
                 999999************************997665 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   8.9e-09   2.7e-05       3     118 ..      49     173 ..      48     184 .. 0.78

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 8.9e-09
      AAA_33   3 llvGlpGsGKstlaerllkklgavllssdtlrr.rlfg.....tdqqsktdytr.vldr..lyqilnelarkalsagrnvildatnlsrrerarflkla 92 
                 +l+G+pG+GK t a ++ +k g+++l++ +++r ++++     ++ +++ d+   v+ +  +++++++ ++ + + +r++ild   ++  + +r+++++
  KHJ30364.1  49 ILIGPPGAGKGTQAPKIKEKFGCCHLATGDMLRsQVAKktqlgNEAKKIMDQGGlVS-DeiVIGMIKQELETNEECKRGFILDGFPRTVLQAERLDSML 146
                 89********************99999877666366666554444555555555344.34789999999999999*******98877777777888776 PP

      AAA_33  93 r.rlgvpvrivvvetdeetlkeRlakR 118
                 + r+    ++v ++ d+++l +R+  R
  KHJ30364.1 147 SkRQQKLQSAVELQIDDSLLVSRITGR 173
                 634444679***************999 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   5.7e-05      0.17       5      35 ..      52      82 ..      48     129 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 5.7e-05
                    -STTSSHHHHHHHHHHHHT-EEEEHHHHHHH CS
  Cytidylate_kin  5 GPagsGKssvaralaeklglkyldtgalYRa 35
                    GP g+GK++ a ++ ek+g+  l tg + R 
      KHJ30364.1 52 GPPGAGKGTQAPKIKEKFGCCHLATGDMLRS 82
                    9***************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       667  (0.0372023); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2001.15
//
Query:       KHJ30365.1  [L=314]
Description: putative ubiquitin carboxyl-terminal hydrolase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0055   16.3   3.5       0.12   12.1   0.5    2.5  2  SWIM      SWIM zinc finger


Domain annotation for each model (and alignments):
>> SWIM  SWIM zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.5   6.5e-06      0.12       1      28 [.     209     229 ..     209     229 .. 0.94
   2 !    4.5   0.1    0.0016        28      27      34 ..     275     282 ..     270     287 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 6.5e-06
        SWIM   1 yrVtlddervrlnkatCsCpefqkngip 28 
                 y+V+ld        ++CsC +f ++ +p
  KHJ30365.1 209 YTVYLD-------AWNCSCAAFTFSAFP 229
                 899999.......**********99987 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0016
        SWIM  27 ipCkHalA 34 
                 ++CkH+lA
  KHJ30365.1 275 PICKHLLA 282
                 68*****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2397.14
//
Query:       KHJ30366.1  [L=553]
Description: putative actin-related protein ro7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-22   79.5   0.1    3.5e-19   68.7   0.0    3.7  2  Actin     Actin
  ------ inclusion threshold ------
      0.068   13.4   0.1       0.24   11.6   0.1    1.9  1  2C_adapt  2-cysteine adaptor domain


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.7   0.0     4e-23   3.5e-19       4     353 ..      40     402 ..      38     433 .. 0.75
   2 !    3.8   0.1    0.0019        17     340     400 ..     457     514 ..     448     517 .. 0.75

  Alignments for each domain:
  == domain 1  score: 68.7 bits;  conditional E-value: 4e-23
       Actin   4 vsavVlDnGssttraGyagedaPkavipslvgkprgrkvea......klyvgde..altk..rpelevr....spvedGvvedwdaveelwehvlkeel 88 
                 ++ v+++ Gs+++r+G ag  +P+a+     g  ++r+  +      ++ + +   + +k   + +e+     + v+  +v   d++e+ +++++++ l
  KHJ30366.1  40 EECVIIELGSRFLRVGPAGCAFPQAIT--DFGPEQQRRAGDlrkwalDYDFSNRsgHNEKrwGKDYELWsldlREVDLALV--GDKIERALRESFTKTL 134
                 567999999999999999999999774..4555555544445677774444444331112112222222000123444444..689************* PP

       Actin  89 kvdpeehpllltepplnppkqrekalEivfEkfkvpalylaksavlsafasgkstglvvDsGasvtsvvpVldGyvL..kkairrsdlgGkaLteqlke 185
                  +d++  ++ll+ p+l p      +lE +f +f+ p+++l+ + +l+  a+g++++lv+D+G ++tsv+ V++   +  +++ir s   G+++ + +++
  KHJ30366.1 135 LIDSRPRRILLAIPSLLPLPLLFTVLETIFSNFQPPSISLMPTSILTTVAAGLRSALVIDIGWAETSVTSVYELREVqcNRSIRASRTLGETVFNRINK 233
                 ************************************************************************966552279****************** PP

       Actin 186 llssknvevtprylikkkkvveaessae.keelekltesyktleeeev..leeiKesvcevsedpegdeekss...sspeksYeLPDgseiklgeeRfk 278
                 ++++ + e +p  +  + + +e e+ +e     ++++++ k+l+  ++  l+e  e  + ++    +de +++   s p +s + P   +i ++e    
  KHJ30366.1 234 IVTKCSSEGSPDDSKTQISFEECEEIIErMVWCKSIKQQAKNLDSGYLatLKEGEELNISIEGPCTTDEGEPDnivSLPLNSIKPPKTIQIPFSEFSEP 332
                 ****99*******99999999999998875556666666666666554113344444444433333233333333344555555566566666665555 PP

       Actin 279 vpEiLFdpsligsesaleeekskllgiselivaainacdvdlrpeLlanivvtGGnsllpglteRlekelaqlas 353
                 +  +LF   + +s+       ++ l ++ l+++++ +++vd+r+  +a+i+ +GG+s +pgl+ R+ +el+ l+ 
  KHJ30366.1 333 CEIALFANGIPESDID-----DEELPLHLLAYKSLLKLPVDVRAMCMARIIFVGGSSQIPGLRTRIMQELSSLIE 402
                 5557898776666555.....56799********************************************99744 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.0019
       Actin 340 lteRlekelaqlaskgvkvkiiapeeerkysaWiGGSiLAslgtfqqlwvskqEYeEqGss 400
                 +te l++e  ++ +     k +a    ++ +aW G+S+++ ++  +   + k+ +  +G+s
  KHJ30366.1 457 ITEKLKREYLRTQPRAEMGKLRAV---KSLGAWAGASLMSLMKIQPCSIIEKEQWAQNGAS 514
                 566677776664444444445554...599*******998888888899999999999986 PP

>> 2C_adapt  2-cysteine adaptor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   2.7e-05      0.24      12      23 ..     407     418 ..     402     421 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.7e-05
    2C_adapt  12 NPlTgRkikpdG 23 
                 NP+Tg++ik+++
  KHJ30366.1 407 NPVTGKTIKKNS 418
                 **********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (553 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       571  (0.0318478); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 3684.38
//
Query:       KHJ30367.1  [L=517]
Description: putative seryl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-18   67.8   0.0      2e-18   67.0   0.0    1.4  1  tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, 
    2.1e-07   31.1   1.5    5.4e-07   29.8   1.5    1.7  1  Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain


Domain annotation for each model (and alignments):
>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.0   0.0   2.3e-22     2e-18      10     178 ..     304     487 ..     297     488 .. 0.82

  Alignments for each domain:
  == domain 1  score: 67.0 bits;  conditional E-value: 2.3e-22
                   EEEE-SSSHHHHHHHHHHHEEEBGGSSEEEEEEEEEEBTTTS....TBCTTTB-SEEEEEEEEEEESG..GGHHHHHHHHHHHHHHHHHHTT.SCEE CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b  10 eyiLkPtneetfvelirdevlrskrLPlklyqiqtkyRdEks....dsrGLlRvreFhqkdgyvfhae..aslddslrdlikaisriferlglefra 100
                   ++ L  t+e +++++  +++l   +LP+k++ ++++yR E+     +s+GL Rv+eF++ + +   ++  a +++++ ++    ++i+ +l l+ r 
    KHJ30367.1 304 QLSLAGTAEIPMASMKANQILDASKLPMKYIGVSRCYRAEAGargaNSKGLYRVHEFTKVEMFAWTLPdnAASNNIFDEMHSIQQEILGKLQLHCR- 399
                   57788999***********997777****************7679999******************953477888999999999*********988. PP

                   EEEE.GTTSCBTTSEEEEEEEEETT.......TSEEEEEEEEEEEETHHHHHTTE....EEECTTSSEEEEEEEEEE.EEHHHHHHHHHHH CS
                   xxxx.xxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx RF
  tRNA-synt_2b 101 iiel.msaksadykdkkefeavses.......ltkgieigtiqklgtrlserlga....tvldennreksvimicaa.igveRllsaileq 178
                   i+e+   +  a++  k ++e  ++s           +e+ + + + +++s+rl +    +   + ++ +++++++ + ++v R+l+aile+
    KHJ30367.1 400 ILEMpSTDLGASAMRKIDIETFFPSrqareggW---GEVTSLSICTDYQSRRLATrlrlQQSGQTEQFQFPYTLNGTaLAVPRVLAAILEN 487
                   6666677788**************854443331...466666666666666665533226777778899******999***********97 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   1.5     6e-11   5.4e-07       2     107 ..      56     174 ..      55     175 .. 0.87

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 6e-11
                   --HHHHHH-HHHHHHHHCCCT..CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTT...........S-TCCCCCCCHHHHHHHHH CS
  Seryl_tRNA_N   2 LDiklirenpeavkeklkkRg..edkadvdelleldekrrelqveleelqaerNelskeIgkakkkk...........edaeeliaevkelkeelka 85 
                   ++ik ir+n  + ++++  R+   ++    ++ +l e++++ q+   +l++++N l+++ +++                 ++  + e++ lkeel  
    KHJ30367.1  56 INIKHIRDNATLHEQNCLDRNyrIQATYPSKINSLTERWQSYQKSSRSLREKSNWLTRQLASKNLPLdvnsnpseneeFSRQIYLTEARHLKEELTS 152
                   89*******************8544555689*****************************99986656667787664334566789*********** PP

                   HHHHHHHHHHHHHHHHCTS--- CS
  Seryl_tRNA_N  86 leaelkeleaeleklllaiPNi 107
                   +++e+++l+ae+ +l+la+PN+
    KHJ30367.1 153 IDKEQSALSAEIFQLALAMPNL 174
                   *********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       689  (0.0384294); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3730.37
//
Query:       KHJ30368.1  [L=498]
Description: putative betaine aldehyde dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.2e-151  505.4   0.0   1.4e-151  505.2   0.0    1.0  1  Aldedh    Aldehyde dehydrogenase family


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  505.2   0.0  7.5e-156  1.4e-151       4     461 ..      18     482 ..      15     483 .. 0.97

  Alignments for each domain:
  == domain 1  score: 505.2 bits;  conditional E-value: 7.5e-156
                 -SS.SEEEEEETTTCEEEEEEE-B-HHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTHHHHHHHHHHHH---HHHHHH.HHHHHHHHHHHH CS
      Aldedh   4 ses.etievinPatgeviakvpaataedvdaavaaAkeafkawaklpaeeRaeiLrkaadlleerkeelaeletletGkplaeara.eveeaidvlryy 100
                 ++s +++++i+P+t +v+a+v+ a+++d+daava+A++af++w++++a  R++iL ka ++l++r++ +a++et +tG p++e+++ ++    dvl+yy
  KHJ30368.1  18 ASSgKKFQTIDPSTTQVLADVQIASKADIDAAVASAEKAFSSWSQTSAIFRSRILLKAVAILRSRNDVIARVETNDTGRPFTETSTvDLVTGTDVLEYY 116
                 445477********************************************************************************************* PP

                 HHHHHH..HSEEEEEECTTEEEEEEEEE-SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHTTS-TTSEEE--SSTCCHH CS
      Aldedh 101 aelaek..legevlpssegklalvrrePlGvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeeaglPkgvlnvvtgsgsevg 197
                 a+l+    l+ge+++ ++++  ++++e+lGv + I +WN+P+ +a+wk ap+laaGN++++KP+e tpl   +la+++ eaglP+gv+nvv+g+g +vg
  KHJ30368.1 117 ANLVASggLNGETAQLRPDAWVYTKKEALGVAVGIGAWNYPIQIALWKSAPCLAAGNCMIYKPSEFTPLHGNILAQIYTEAGLPAGVFNVVHGDG-DVG 214
                 ***88879*****9999****************************************************************************77.7** PP

                 HHHHH-TTESEEEEES-HHHHHHHHHHHHCTTSEEEEEE---EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHT- CS
      Aldedh 198 ealvehpevdkvsftGstevgrkiakaaaknlkrvtlElGGknplivledaDldkaveaivkgafgnaGQvCiaasrllvqesiydefveklveaakkl 296
                 ++lv+hp++ kvsftG +++g+k+a++aa+ +k +t+ElGGk+pli+l+d+D++kav+ ++++ f+++GQvC++++r++v++ +  +f  +l+e++  +
  KHJ30368.1 215 SYLVSHPGISKVSFTGQVSTGQKVAASAASGMKHITMELGGKSPLIILPDTDIEKAVDVAMMANFFSTGQVCTNGTRVFVHRTMKTAFERRLIEKMYYV 313
                 *************************************************************************************************** PP

                 -BS-TTSTT-SB---SSHHHHHHHHHHHHHHHH.TTSEEEE-TT....E.SB-SSSTTEE--EEEES-TTTSHHHHS---SSEEEEEEESSHHHHHHHH CS
      Aldedh 297 kvgdpldedtdvGPliseaqlekvekyveeake.egaklllGge....reeaglekgyfvePtvlanvtpdmriaqeEiFGPVlsvikfkdeeeaieia 390
                 +   p++e++++GPlisea+++kv +y+ ++++ + a+l++Gg+    +  + + +gy+v+Ptv++++t+dm+i +eEiFGPVl++++++++ee+i+ a
  KHJ30368.1 314 RSLPPMHEKCNFGPLISEAHFRKVIGYIRHGISvDKARLIYGGAnkpsNIPPPYTNGYWVQPTVFTDCTDDMKITKEEIFGPVLCILTYDTVEEVIKRA 412
                 *******************************974689******98877678899********************************************* PP

                 HSSSEESEEEEE-SBHHHHHHHHHHS-SSEEEESSSST--TTTSEB--CGGGEES-BSHHHHHHHTEEEEE CS
      Aldedh 391 NdteyGLaagvftkdleraervaerleaGnvyiNdsttgaaealpfgGvkqSglGreggkegleeytevkt 461
                 Ndt+ GLaagvf+kd+++++++++rl+aG  +iN++ ++ ae+  +gG+k+Sg+G e+g+ gl+++++ k+
  KHJ30368.1 413 NDTKLGLAAGVFGKDINKCHHIIDRLKAGITWINTWGESPAEM-SVGGWKMSGIGVENGRRGLDAWIREKS 482
                 ************************************8888888.*********************998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (498 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.30s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3568.70
//
Query:       KHJ30369.1  [L=576]
Description: hypothetical protein EV44_g2011 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (576 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4040.31
//
Query:       KHJ30370.1  [L=358]
Description: putative autophagy protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0028   17.8   1.9     0.0057   16.8   1.9    1.6  1  CHCH      CHCH domain
     0.0035   17.3   3.2     0.0035   17.3   3.2    2.0  2  Cmc1      Cytochrome c oxidase biogenesis protein Cmc1 like
  ------ inclusion threshold ------
      0.089   13.2   0.1       0.17   12.3   0.1    1.5  1  DUF5063   Domain of unknown function (DUF5063)
        1.3    9.1   8.1        1.6    8.9   5.1    2.5  3  RRM_3     RNA binding motif


Domain annotation for each model (and alignments):
>> CHCH  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   1.9   1.3e-06    0.0057       1      33 [.     158     192 ..     158     194 .. 0.94

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.3e-06
                 THHHHHHHHHHHHHCTSS..TTTTHHHHHHHHHHH CS
        CHCH   1 CgeefkeylkClkdnsde..fskCrkefeafkeCv 33 
                 C+ e  ++ +C+   s+     +Cr+e++af+ C 
  KHJ30370.1 158 CALEQAALSDCWTHGSAKarLMLCREENKAFNRCH 192
                 99***************777**************7 PP

>> Cmc1  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   3.2   7.8e-07    0.0035       5      47 ..     150     193 ..     147     200 .. 0.90
   2 ?   -3.5   0.8       2.5   1.1e+04      48      59 ..     328     339 ..     326     343 .. 0.49

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 7.8e-07
        Cmc1   5 lkkkarkeCaelikalaeChkd.rllkvvgkCneekeamkkClk 47 
                 + k a+++Ca + +al +C    + +  ++ C+ee++a+++C +
  KHJ30370.1 150 IGKAALENCALEQAALSDCWTHgSAKARLMLCREENKAFNRCHT 193
                 567899****************999999**************76 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.5
        Cmc1  48 eyrtderlkdae 59 
                 e++++er+ ++e
  KHJ30370.1 328 EKQKEERKARKE 339
                 445555553333 PP

>> DUF5063  Domain of unknown function (DUF5063)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   3.7e-05      0.17      57     121 ..     268     333 ..     224     350 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.7e-05
     DUF5063  57 e.edveleerveEedyealrealarlLgekddYlevfdpdmkysdtpiaasisedLadIyqdlkng 121
                 + +dve e+ +  +  +++r++l+  L+e  d   ++++ + + +  + +s+  +LadIy++ k+ 
  KHJ30370.1 268 AlQDVEKETCLPSDLKSSVRKQLKTRLEELTDIEREVEEQAIKAEIRAGESLGRNLADIYEKQKEE 333
                 356778888888888899***************9988888855656666***********988775 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.33   1.5e+03      17      32 ..      25      40 ..      12      49 .. 0.80
   2 ?   -2.2   0.0      0.93   4.2e+03      47      91 ..     148     196 ..     143     201 .. 0.57
   3 ?    8.9   5.1   0.00035       1.6      51     101 ..     291     341 ..     281     342 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.33
                HHHHHCHCCS-ECEEE CS
       RRM_3 17 dikellsklgevayvd 32
                +++e+l+k ++v+y +
  KHJ30370.1 25 SLREFLKKESPVKYYN 40
                79999******99955 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.93
                 HHHHHHHHHHHHHC-B-CCTS....SEEEEE--HHHHHHHHHHHHHHHH CS
       RRM_3  47 deeakkalekateaklkikda....evtlelLeGeeEkeywkkiledkq 91 
                 +e +k+ale+ +  +  + d+    + +++l+   eE++++++    ++
  KHJ30370.1 148 AEIGKAALENCALEQAALSDCwthgSAKARLMLCREENKAFNRCHTMQS 196
                 5556666666555544444431111456777777788888877776665 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.00035
                 HHHHHHHHHC-B-CCTSSEEEEE--HHHHHHHHHHHHHHHHHCC---S-SS CS
       RRM_3  51 kkalekateaklkikdaevtlelLeGeeEkeywkkiledkqkkknnarekg 101
                 k  le++t+++ +++++ +++e+  Ge   + +  i e+++++++ ++ekg
  KHJ30370.1 291 KTRLEELTDIEREVEEQAIKAEIRAGESLGRNLADIYEKQKEERKARKEKG 341
                 667899999***********************************9999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1377  (0.0768029); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2569.73
//
Query:       KHJ30371.1  [L=141]
Description: putative 60s ribosomal protein l14 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-32  111.2   2.5    3.6e-32  110.7   2.5    1.2  1  Ribosomal_L14e  Ribosomal protein L14
    0.00015   21.6   1.0    0.00015   21.6   1.0    1.9  2  KOW             KOW motif


Domain annotation for each model (and alignments):
>> Ribosomal_L14e  Ribosomal protein L14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.7   2.5     4e-36   3.6e-32       1      75 []      57     132 ..      57     132 .. 0.99

  Alignments for each domain:
  == domain 1  score: 110.7 bits;  conditional E-value: 4e-36
  Ribosomal_L14e   1 pRqaiplkrlkLtkivl.klprgartgavkkawekadveekwaksawakklaarekraaltDFdRFkvmvakkqrr 75 
                     pRqai+l++l+Lt+ivl kl+rgartg+vk  weka+ve+kw + awakk+ ++++r+altDF+RFkvm++kkq r
      KHJ30371.1  57 PRQAISLSHLILTPIVLdKLTRGARTGVVKTVWEKAEVEAKWLQGAWAKKRCQQQRRRALTDFERFKVMRLKKQAR 132
                     8*************************************************************************86 PP

>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   1.0   1.6e-08   0.00015       1      32 []      16      46 ..      16      46 .. 0.97
   2 ?   -1.9   0.2      0.41   3.7e+03      15      21 ..      81      87 ..      78      88 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 1.6e-08
                TTSEEEESSSTTTTCEEEEEEEETTTTEEEEE CS
         KOW  1 pGdhVkVvsGphkGktGkVvkvdqhkvrVfvd 32
                +G++V + +G + Gk +++v++++h+ rV++d
  KHJ30371.1 16 VGRVVLIQGGAFDGKLATIVEIIDHR-RVLID 46
                799***********************.***98 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.41
                CEEEEEE CS
         KOW 15 ktGkVvk 21
                +tG+V+ 
  KHJ30371.1 81 RTGVVKT 87
                8999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1077.25
//
Query:       KHJ30372.1  [L=1307]
Description: putative exocyst complex component sec3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   7.5e-210  698.9  11.2   9.9e-210  698.5  11.2    1.1  1  Sec3_C           Exocyst complex component Sec3
    1.8e-27   95.3   0.0      4e-27   94.2   0.0    1.7  1  Sec3-PIP2_bind   Exocyst complex component SEC3 N-terminal PI
     0.0036   16.1   1.6     0.0089   14.8   1.6    1.6  1  Vps52            Vps52 / Sac2 family
  ------ inclusion threshold ------
      0.046   11.6   0.1      0.073   11.0   0.1    1.3  1  Herpes_Helicase  Helicase


Domain annotation for each model (and alignments):
>> Sec3_C  Exocyst complex component Sec3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  698.5  11.2  2.2e-213  9.9e-210       1     700 []     554    1290 ..     554    1290 .. 0.96

  Alignments for each domain:
  == domain 1  score: 698.5 bits;  conditional E-value: 2.2e-213
      Sec3_C    1 kdadeleerLsreLskleaan.ikrllesdkkveelkkdidkalkecdeldalltlysveLstlsedieyIEsqnngLQvksaNqklLykeLeells 96  
                  k++de++++++reL +++a++ ++rl e+d+++e++k   dk+++ecde+d lltly veL+tl+ed++yIE+q++gLQv++aNqklL++eL++ll+
  KHJ30372.1  554 KNIDEMKDEVERELCRTQAGGwLNRLEEEDERIEAIKMVFDKVIEECDEFDGLLTLYLVELGTLNEDVAYIEAQSQGLQVQTANQKLLQAELQSLLQ 650 
                  589********************************************************************************************** PP

      Sec3_C   97 tvslsesdleaLkeaelssanglealeealeaLfkAltaIdsdlk...................dlesdlgemravkerrerYekvsssFlrrlvef 174 
                  t+s+s++++e+L+e +l+s+ gl ++e++l+ LfkA+ +Id++l+                     +s++g+mr+++e++++Y+++ + Flrrl++f
  KHJ30372.1  651 TISISPEQIESLRESSLESTRGLNDIETSLVILFKAMLTIDPSLGvssprrsedgslssgkpgvYGNSEIGSMRVLQEKKDVYKSEITIFLRRLKQF 747 
                  ************************************************************************************************* PP

      Sec3_C  175 lekkfksaekelgkdld.........satkkklslekhlevlnlLliYsgLilflKevdaekfeallqqYnasiskvYereikeffeslkkslkkss 262 
                  l+ kf  a+++++ +++          +   kl++ kh  ++n L++Ys+L+lf++evd+ ++e+l+++Y + +  +Y++e++e+f + +++++k +
  KHJ30372.1  748 LQIKFAAAFEQTRLAFEreksnnlsrVSGRVKLDFGKHDLARNILWKYSPLMLFTREVDRLEWENLMNIYGQVLMSLYQEEFREAFMASRRAARKLT 844 
                  ****************9999999977777889999************************************************************** PP

      Sec3_C  263 gseeseslssssseekkteglalrksrkltlkssktganls.......ekaaqkktsgrlkpdeafaevLdeleplilveQnFiidfFhlssletld 352 
                  g+e  e l++s+  ek+ egla +++rklt+ +s+ +a++        + +++ ++ + l+p+e+++e+++ + +++++eQnF ++fFh++sl  +d
  KHJ30372.1  845 GDE-VEALFTSQ-VEKQSEGLA-TTARKLTVMRSQNLAKSLlsqggdnNGKSSLDKGQGLEPYEVIEELISRVTSVMSMEQNFFVEFFHVTSLGLHD 938 
                  ***.99*****6.888899888.**************88888888764333336667789************************************* PP

      Sec3_C  353 fnefvkqsapserrakdlsrsknvesdrelarkveklmeaifqflekelvnlvekvlkvdplqalgilvyleqkikeleesnqsflssvlqkllekv 449 
                  f+e+v++s+p++rr+ d +r ++++++r+la  v + me+if+f++ e++ lv++ l+ dplq +g+++ le+ki e ee+nq++l+++lqkl++++
  KHJ30372.1  939 FPETVAASSPEDRRGVDIKRPRVMDPNRDLAMLVVQSMEEIFSFFSREFQGLVDWSLQLDPLQVVGLIAALERKIPEYEETNQEYLNRTLQKLHTQL 1035
                  ************************************************************************************************* PP

      Sec3_C  450 kslfkkfvdeqvesieetkvkvkkrkgvlpfvrnfpefvkavEsmlssaeralavrtlvdqaYeklieavfelLkreakeekaks.vadeeedkekl 545 
                   +lf kf+d+q++ ieetkvk+kkrkgv+ f+++fp f+ a+E+ l  ae+ l++r+ v++aY+++++a+fe Lk++a+e+++ +    ++++ke+l
  KHJ30372.1 1036 IGLFIKFLDDQIRVIEETKVKIKKRKGVIGFMKTFPLFANALEKKLLGAED-LEIRSTVNNAYSRVSKAMFEALKVIARESPSVQiAGTDQAEKEAL 1131
                  ***************************************************.*******************************997445589***** PP

      Sec3_C  546 nrhvllleNmnhfleeLselknsevleelrdeakqlfdeelelYvdavlrrplgkLieFvegveellqt....kkaaeissqaaySkqalkkilskY 638 
                  n+ ++l++Nm+++lee+++ +n ++lee++++a+ +++e++ lY++a +rrplgkL++F+e++e+++ +    ++  +iss++++Sk+++kk+ls+Y
  KHJ30372.1 1132 NYEIMLMQNMHYYLEEVDPRSN-PILEEWKKNASDEMNEHMALYLNAAIRRPLGKLLDFIESTENMMISrqpgDSVLKISSMPSHSKSTFKKVLSNY 1227
                  **********************.*******************************************9997566666789****************** PP

      Sec3_C  639 takeirkgieklykrvekhfledadra..vleeeLlqkvwseleeefiskylrlekiiqkvYdg 700 
                  +akeir+gie+l+krvekhf+++ d +  + +++L+  v +++e+++ ++ +r+ +ii++vYdg
  KHJ30372.1 1228 DAKEIRRGIETLRKRVEKHFGDEHD-PgiASRNDLVRIVIQNCEKFYENVEDRILTIIRDVYDG 1290
                  ********************55555.459999******************************97 PP

>> Sec3-PIP2_bind  Exocyst complex component SEC3 N-terminal PIP2 binding PH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.2   0.0     9e-31     4e-27       2      90 .]      35     133 ..      34     133 .. 0.97

  Alignments for each domain:
  == domain 1  score: 94.2 bits;  conditional E-value: 9e-31
  Sec3-PIP2_bind   2 kkprfLclsvtksgrkevrlhkvKensngssfsigktWkLkeLklvegrdpdk.............ddpeFdltfdkpykweaesskeknaFirs 83 
                     kk r ++++v+k+gr  vr+hk++en+ng+ fsigktW L++L++v++++  +             ++  F++t++k y+w+a+s+kek++Fi+s
      KHJ30372.1  35 KKLRTIIVAVRKTGR--VRVHKARENANGT-FSIGKTWVLDDLTAVQSFTGVTppgpngeqhklwaGSTGFIVTLGKSYYWKANSQKEKQFFIAS 126
                     899**********99..************9.*********************99************8888************************* PP

  Sec3-PIP2_bind  84 Lvklykk 90 
                     Lvk+y+k
      KHJ30372.1 127 LVKIYHK 133
                     *****96 PP

>> Vps52  Vps52 / Sac2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   1.6     2e-06    0.0089      17     101 ..     580     671 ..     576     688 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2e-06
       Vps52  17 aslhnqiaaidsvleqled.......lLeeFqsdlssissdikklqekSnelqlrLenrkaveaklsklvddlivppelidvIiegkvnees 101
                 +++ ++i+ai+ v +++++       lL+ + ++l+ +  d+  ++ +S+ lq++  n+k  +a+l +l++ + ++pe i+ + e+ ++ ++
  KHJ30372.1 580 EEEDERIEAIKMVFDKVIEecdefdgLLTLYLVELGTLNEDVAYIEAQSQGLQVQTANQKLLQAELQSLLQTISISPEQIESLRESSLESTR 671
                 56678889998888888872222222455556899999*******************************************99999888744 PP

>> Herpes_Helicase  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   1.6e-05     0.073     449     602 ..    1053    1232 ..     995    1285 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 1.6e-05
  Herpes_Helicase  449 ssvsvnskvkklviGfsGtfekFkkvLekdsFiea..tgeeqaeyaYsflsrllfsglysFynskltke.eeevlkelaelklps..lssle 535 
                       +   v+ k +k viGf+ tf  F++ Lek +   +  + +  ++ aYs +s+ +f++l        + +   +  +e ++l+ ++  ++ ++
       KHJ30372.1 1053 T--KVKIKKRKGVIGFMKTFPLFANALEKKLLGAEdlEIRSTVNNAYSRVSKAMFEALKVIARESPSVQiAGTDQAEKEALNYEImlMQNMH 1142
                       3..4566889*******************9885441145678899*************9887766655533333334444444420022222 PP

  Herpes_Helicase  536 eaaaaveed............eqreegteelldeela...................vdvelldeesadvfylkylkppsasslsleevvaly 596 
                           +v  d            +    +++e++++ +                    ++  ++ ++  d + lk++  ps+s+ ++++v++ y
       KHJ30372.1 1143 YYLEEV--DprsnpileewkkN----ASDEMNEHMALylnaairrplgklldfiesTENMMISRQPGDSV-LKISSMPSHSKSTFKKVLSNY 1227
                       222222..12233333222220....22222222222444445555555555555345555555556665.455555566666777777777 PP

  Herpes_Helicase  597 ttlkdi 602 
                        + k+i
       KHJ30372.1 1228 DA-KEI 1232
                       53.444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       859  (0.0479112); expected 358.6 (0.02)
Passed bias filter:                      595  (0.0331865); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.88u 0.34s 00:00:01.22 Elapsed: 00:00:00.47
# Mc/sec: 8289.82
//
Query:       KHJ30373.1  [L=381]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       745  (0.0415528); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2749.78
//
Query:       KHJ30374.1  [L=107]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 833.12
//
Query:       KHJ30375.1  [L=205]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1487.81
//
Query:       KHJ30376.1  [L=202]
Description: putative cue domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-10   38.3   0.0    1.4e-09   37.5   0.0    1.5  1  CUE       CUE domain
  ------ inclusion threshold ------
        7.9    6.2  12.3       0.52   10.0   6.7    1.9  2  G2BR      E3 gp78 Ube2g2-binding region (G2BR)


Domain annotation for each model (and alignments):
>> CUE  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.5   0.0   1.5e-13   1.4e-09       1      41 [.      48      88 ..      48      89 .. 0.95

  Alignments for each domain:
  == domain 1  score: 37.5 bits;  conditional E-value: 1.5e-13
                CHHHHHHHHHHSTTS-HHHHHHHHHHCTTTHHHHHHHHHHC CS
         CUE  1 reqmletLkemFPdldeevIravLrasngnvEatinaLLeg 41
                re ++e +++mFP+  +  I ++L++++gnv ati++ L+g
  KHJ30376.1 48 READVERIQQMFPQAQRRSIMWDLQRNGGNVAATIERVLSG 88
                5789***********************************98 PP

>> G2BR  E3 gp78 Ube2g2-binding region (G2BR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.2      0.29   2.6e+03      14      23 ..      56      65 ..      52      66 .. 0.70
   2 ?   10.0   6.7   5.8e-05      0.52       3      22 ..     168     187 ..     166     189 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.29
        G2BR 14 EdLLqqARRR 23
                  +  qA RR
  KHJ30376.1 56 QQMFPQAQRR 65
                5677788888 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 5.8e-05
        G2BR   3 dERQRMLvqRKEdLLqqARR 22 
                  ERQ  L  R +++++ ARR
  KHJ30376.1 168 SERQALLKRRRDEMILAARR 187
                 5******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1267  (0.0706676); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 1575.11
//
Query:       KHJ30377.1  [L=453]
Description: putative mosc domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-12   47.9   0.0    3.4e-12   46.3   0.0    1.8  1  MOSC_N    MOSC N-terminal beta barrel domain
    1.8e-10   40.9   0.0    6.6e-10   39.1   0.0    2.0  1  MOSC      MOSC domain


Domain annotation for each model (and alignments):
>> MOSC_N  MOSC N-terminal beta barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.0   3.8e-16   3.4e-12       3      68 ..     102     184 ..     100     202 .. 0.89

  Alignments for each domain:
  == domain 1  score: 46.3 bits;  conditional E-value: 3.8e-16
      MOSC_N   3 rvssLyvyPiKsckgvslseaevtaaGllalDReflvvd.edG.................kfltqrrePrlalirteldeedgl 68 
                 r++sL++yPiKsc+gv+l++ ++  +G+ + DR+f+  +  +                  +++tq+++Prla +rt++   d+ 
  KHJ30377.1 102 RIKSLWIYPIKSCRGVELNRGTIWSKGM-HYDRQFAFAQlRSPfpvaartpenekadhkwEIITQKQYPRLAEVRTQMWIPDQS 184
                 89*************************8.6*********55559********************************99755555 PP

>> MOSC  MOSC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1   0.0   7.4e-14   6.6e-10       4      77 ..     312     386 ..     309     441 .. 0.76

  Alignments for each domain:
  == domain 1  score: 39.1 bits;  conditional E-value: 7.4e-14
                 ---GGGGSEEEEETHHHHHHHHHS..GGG.GG-STTTT--SEEES-.......-TTT-BTT-E.EEETT...... CS
        MOSC   4 ihggdekavllisresldalneelkegrs.veldpgrfreNivvggaaafeEdtwkelrigdrrfrlggacsRcq 77 
                 + ++d  +v+l++ + ++++++++ +     +l++++fr+Ni+++g +a++E +w++++ig  ++++ ++ sR +
  KHJ30377.1 312 VGFQDAYPVHLVNLATIRDIESRMVKTSTtPRLSAANFRANIIITGPEAYHERSWRKVKIGFYEYDIADRQSRVK 386
                 6799*****************99977666899************999****************9**999888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3246.10
//
Query:       KHJ30378.1  [L=99]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      0.002   18.2   0.2     0.0026   17.8   0.2    1.3  1  ArfGap    Putative GTPase activating protein for Arf
  ------ inclusion threshold ------
      0.095   13.1   0.1       0.13   12.7   0.1    1.2  1  GP68      Phage protein Gp68


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.2   2.9e-07    0.0026      36      91 ..       6      60 ..       1      85 [. 0.82

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 2.9e-07
                -HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG CS
      ArfGap 36 CieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekr 91
                C +Csg Hr   ++    r ++ d  ++e+l++ +++g+++ n++  ak+ +e+  
  KHJ30378.1  6 CRNCSGPHRAD-SRRCLARPTRSDAPTKEQLKTYRQMGEREYNAVQRAKVAEEKAA 60
                *********98.677789******************************99777666 PP

>> GP68  Phage protein Gp68
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   1.4e-05      0.13      18      65 ..      17      64 ..       4      73 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.4e-05
        GP68 18 etagvlrmrraGykGaailkllklrGtrlvnqmqraldaetaaaraGr 65
                   ++ r  r+    ++ lk  +  G r  n +qra  ae++aa   r
  KHJ30378.1 17 SRRCLARPTRSDAPTKEQLKTYRQMGEREYNAVQRAKVAEEKAASIDR 64
                3468889999999999**************************998777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1081  (0.0602934); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 733.98
//
Query:       KHJ30379.1  [L=476]
Description: putative gpi anchored protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.087   12.2   0.4       0.17   11.2   0.4    1.4  1  TMEM43    Transmembrane protein 43


Domain annotation for each model (and alignments):
>> TMEM43  Transmembrane protein 43
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.4   9.5e-06      0.17      20      80 ..      25      85 ..      21     117 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9.5e-06
      TMEM43 20 eetettYtYekeWrselidSseFkepegheNpssmpvesetqvaedvkvGaykLskelvek 80
                 +++ +Y++ k+W +++ +S++ ++pe+ +N+++   e+   + e+ +vG +k++ +  +k
  KHJ30379.1 25 VRSSAEYWHVKRWLNNPSKSHFDDRPENLSNRRRDLSEKVDLMREKHRVGVMKMTADEGQK 85
                677899***************99999******88888999999999****99999765555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       756  (0.0421663); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3538.06
//
Query:       KHJ30380.1  [L=269]
Description: hypothetical protein EV44_g3142 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.044   13.9   0.2        9.5    6.4   0.1    2.4  2  Imm40     Immunity protein 40


Domain annotation for each model (and alignments):
>> Imm40  Immunity protein 40
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0    0.0015        26      46      72 ..     144     169 ..     135     181 .. 0.86
   2 ?    6.4   0.1   0.00053       9.5      49      84 ..     221     256 ..     212     260 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0015
       Imm40  46 isyeswsinkdpgesleeyvrksklra 72 
                 +++ +w +n +  + + +y + sklr 
  KHJ30380.1 144 VAFTTWQMNVE-LNPSTNYTQLSKLRK 169
                 689*******9.77889******9985 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.00053
       Imm40  49 eswsinkdpgesleeyvrksklralryiedyekqae 84 
                 e+ws+ ++   s e+ +r s l    y +++    +
  KHJ30380.1 221 EKWSFIREETRSKENSFRASELVQSSYFDEFVLSLC 256
                 79***************************9987666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       355  (0.0198003); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1919.17
//
Query:       KHJ30381.1  [L=436]
Description: putative inositol 5-phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0012   18.5   0.0     0.0034   16.9   0.0    1.8  1  Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   1.9e-07    0.0034      32     204 ..      41     309 ..      10     341 .. 0.59

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1.9e-07
                    SEEEEEEEBSCTCHHHHHHHHH..................TTCEEEEECCH............................................. CS
                    xxxxxxxxxxxxxxxxxxxxxx..................xxxxxxxxxxx............................................. RF
  Exo_endo_phos  32 DvlgLQEvdddelsriplllal..................ggflgasstsp............................................. 64 
                     vl LQEv   ++++i   l+                   +   g                                                   
     KHJ30381.1  41 IVLSLQEVAPTPYAFIGGSLLTpyirrfhdaianypvyedF---G-----Ndtssyvpvvihnigttclivytknpsavrdiettgvgtgywnmgn 128
                    46667777777777766666656666666666554442221...1.....1223334456666666666666666666666666666555444444 PP

                    ..............................................ECSSSTTSSEEEEEECSTE....EEEEEEEEEETSSSSGCEEEEEEEEEE CS
                    ..............................................xxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  65 ..............................................tgggggggnggavlsrfpl....tslfrrtfiefndlvaalrreplaakl 110
                                                                  + + ++ g+   +ls+ +                                
     KHJ30381.1 129 kgaagarltynnteltfaalhlsamewnlnkrnqnwekivkglifsSSISNKIGDNIPLLSSVSKnasmY-------------------------- 198
                    4444444444444444444444444444444444444444444444444444444444444444433220.......................... PP

                    EEEEECCCHHGHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SSSTSGGGBSCGHHHHHHCTTTH.............................. CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............................. RF
  Exo_endo_phos 111 eqlniashrdhdlvrdlqllalllqvealnadrgapvivaGDfNarpsdddsrvlrtrglalapap.............................. 176
                                                     + ++++aGD+N+            r  +l+pap                              
     KHJ30381.1 199 -------------------------------KASSHLFIAGDLNY------------RTSQLSPAPqdyltafpqpdmspdnehhflnllksdqln 251
                    ...............................23445999******............777777777778888888888888888887777777666 PP

                    .....H.........................SSCESCETTTTTTTTTTTEB-BEEEEE CS
                    .....x.........................xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 177 .....v.........................glyllgggptptyvtraggsrlDrila 204
                         +                         + ++++++  +++ ++ ++s  Dril+
     KHJ30381.1 252 qarraGqtchglseanitfpptykhkinkeiASNYNNQTEKWNWAPNRWPSWCDRILY 309
                    66655055555666667777888888899997777777777777777777777***88 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 3215.12
//
Query:       KHJ30382.1  [L=192]
Description: hypothetical protein EV44_g1082 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.5e-09   36.2   0.0    1.4e-08   35.4   0.0    1.4  1  AAA_18           AAA domain
    0.00026   21.1   0.0    0.00036   20.7   0.0    1.2  1  AAA_33           AAA domain
  ------ inclusion threshold ------
      0.023   15.0   0.0      0.055   13.7   0.0    1.9  1  AAA_22           AAA domain
      0.026   14.3   0.0       0.87    9.3   0.0    2.2  2  Cytidylate_kin   Cytidylate kinase
      0.038   13.9   0.0       0.21   11.5   0.0    2.0  2  APS_kinase       Adenylylsulphate kinase
      0.062   13.0   0.0        2.4    7.8   0.0    2.3  2  Thymidylate_kin  Thymidylate kinase
      0.083   13.1   0.0        1.1    9.5   0.0    2.2  2  AAA_28           AAA domain
      0.088   12.2   0.0       0.18   11.2   0.0    1.5  2  KTI12            Chromatin associated protein KTI12
       0.12   11.7   0.0        0.7    9.1   0.0    2.0  2  Zeta_toxin       Zeta toxin


Domain annotation for each model (and alignments):
>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   0.0   6.8e-12   1.4e-08       1     114 [.       6     130 ..       6     135 .. 0.80

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 6.8e-12
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.gvnlrdvakenglllevdpealdeskrldedkldklldaleenss.........aleegknlvidghlaelese 89 
                 I ++G pG+GK t ak+L++rl +   ++ +++ + +l     p   + + +l+++ +d+ +++l ++s+         +++ +++  i   +  ++  
  KHJ30382.1   6 IYINGWPGAGKHTTAKALEQRL-CgKARVVHNHLHIDLAGAILPRTSPGYYELRQQLRDVFFQTLAAASEtfefiyiftDSQTNDP--IGRGVTSHFAR 101
                 78****************9998.776777777777777777777777789999999999999999999989999999877777777..55555555555 PP

      AAA_18  90 aakdikk....vvLtaspeelleRlekRg 114
                 aa d+ +    vvL +++ee l+Rl+ ++
  KHJ30382.1 102 AASDRDCafipVVLNCEEEENLRRLRSQE 130
                 55555556688**************9876 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   1.8e-07   0.00036       2     120 ..       6     131 ..       5     149 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.8e-07
      AAA_33   2 vllvGlpGsGKstlaerllkklg.avllssdtlrrrlfg..tdqqsktdytrvldrlyqilnelarkalsagrnvil....datnlsrrer...arflk 90 
                 +++ G pG+GK t a+ l ++l    ++  + l+  l+g    ++s+  y +++++l++  ++++  a+s+ + +i      +t  ++  r   + f +
  KHJ30382.1   6 IYINGWPGAGKHTTAKALEQRLCgKARVVHNHLHIDLAGaiLPRTSP-GYYELRQQLRDVFFQTL-AAASETFEFIYiftdSQT-NDPIGRgvtSHFAR 101
                 6789******************9989999999999999975445454.6789999****999999.588999888874463333.3444445569**** PP

      AAA_33  91 larrlgvpvrivvvetdeetlkeRlakRaa 120
                 +a++ ++++  vv+++ ee+  +Rl+ +++
  KHJ30382.1 102 AASDRDCAFIPVVLNCEEEENLRRLRSQER 131
                 ************************998876 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.8e-05     0.055       5      38 ..       3      38 ..       1     191 [. 0.69

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.8e-05
      AAA_22  5 agilvvtGesGtGKTtllrrlleqldeeakaee..e 38
                + ++++ G +G+GK t+++ l ++l+  a   +   
  KHJ30382.1  3 QPFIYINGWPGAGKHTTAKALEQRLCGKARVVHnhL 38
                679*********************986443333443 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.044        88       1      22 [.       6      27 ..       6      35 .. 0.89
   2 ?    9.3   0.0   0.00044      0.87     186     210 ..     163     187 ..     156     188 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.044
                    EEEE-STTSSHHHHHHHHHHHH CS
  Cytidylate_kin  1 iaiDGPagsGKssvaralaekl 22
                    i i G  g+GK + a+al ++l
      KHJ30382.1  6 IYINGWPGAGKHTTAKALEQRL 27
                    5689999***********9998 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00044
                     TT-EEEETTTS-HHHHHHHHHHHHH CS
  Cytidylate_kin 186 edaliidtskltieevvekilelik 210
                     ++ l+id ++++++evveki+++++
      KHJ30382.1 163 KELLVIDVTHKSVNEVVEKIIKHLE 187
                     6789*****************9875 PP

>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0    0.0001      0.21       5      31 ..       6      32 ..       3      45 .. 0.87
   2 ?    0.2   0.0      0.31   6.3e+02      85     117 ..      54      93 ..      31     111 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.0001
                EEEESSTTSSHHHHHHHHHHHHHHTT- CS
  APS_kinase  5 vwltGlsgsGKstianalekkLvekgi 31
                +++ G  g+GK t a+ale++L  k +
  KHJ30382.1  6 IYINGWPGAGKHTTAKALEQRLCGKAR 32
                89*******************987764 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.31
                 SHHHHHHHHHHHHCH.......TEEEEEEEE--HHHHHHH CS
  APS_kinase  85 yreeReaarelleea.......lkfievfvdtplevceer 117
                 y e R++ r+++ ++        +fi +f d + +    r
  KHJ30382.1  54 YYELRQQLRDVFFQTlaaasetFEFIYIFTDSQTNDPIGR 93 
                 6677777777665544445555788888888776655555 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0    0.0012       2.4       1      25 [.       8      32 ..       8      38 .. 0.86
   2 ?    2.8   0.0      0.04        80     124     185 .]     115     182 ..     111     182 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0012
                     EEESTTSSHHHHHHHHHHHHHHTTE CS
  Thymidylate_kin  1 iEGlDGaGKttqaellkerlkeegi 25
                     i G  GaGK t a++l +rl+ +++
       KHJ30382.1  8 INGWPGAGKHTTAKALEQRLCGKAR 32
                     67999***************99885 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.04
                      EESSHHHHHTSCCTTSS.....TTTSHHHHHHHHHHHHHHHHHHHH.TTSTEEEEETTS-.HHHHHHHH CS
  Thymidylate_kin 124 ldvdpevalkRlakrde.....ldeeeeeqldflrkvrerylelak.ederiliidasks.ieevheeI 185
                      l++++e++l+Rl+ ++        +    + d l+ +r    e++k   +++l+id +++ ++ev+e+I
       KHJ30382.1 115 LNCEEEENLRRLRSQERldlaqGGKGLLLDTDLLKGFRG-QGEILKwPCKELLVIDVTHKsVNEVVEKI 182
                      788999999999999994432111334455666666666.66777766777777777766677777776 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00054       1.1       2      28 ..       6      35 ..       5      84 .. 0.89
   2 ?    1.7   0.0      0.14   2.8e+02      58      84 ..     124     149 ..      93     152 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00054
      AAA_28  2 ivitGgestGKTtlleaLaar...gypvvp 28
                i+i G +++GK t+++aL++r   + +vv+
  KHJ30382.1  6 IYINGWPGAGKHTTAKALEQRlcgKARVVH 35
                8999***************99886566664 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.14
      AAA_28  58 rvleeqleeeaaaaankvlfcDrglld 84 
                 r+l+ q e++  a+++k l++D++ll 
  KHJ30382.1 124 RRLRSQ-ERLDLAQGGKGLLLDTDLLK 149
                 334333.56677899********9986 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   9.2e-05      0.18       2      34 ..       4      36 ..       3      70 .. 0.85
   2 ?   -3.1   0.1       2.2   4.3e+03     197     211 ..     173     187 ..     163     190 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9.2e-05
                .EEEEE--TTSSHHHHHHHHHHHHHHTT--EEE CS
       KTI12  2 pLvvltGlPssGKstrakeLakaleeekrsvvv 34
                p + + G P +GK t ak L++ l  + r v+ 
  KHJ30382.1  4 PFIYINGWPGAGKHTTAKALEQRLCGKARVVHN 36
                7899********************998877764 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.2
                 HHHHHHHHHHHH... CS
       KTI12 197 ketseivkeileaqk 211
                 k+++e+v++i+++++
  KHJ30382.1 173 KSVNEVVEKIIKHLE 187
                 667778888887765 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00035       0.7      19      48 ..       6      35 ..       3      75 .. 0.85
   2 ?    0.2   0.0      0.19   3.7e+02      47      91 ..     141     186 ..     127     189 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00035
  Zeta_toxin 19 illgGqpGAGKselaellkdelerqgnvvr 48
                i + G pGAGK ++a++l+++l  + +vv+
  KHJ30382.1  6 IYINGWPGAGKHTTAKALEQRLCGKARVVH 35
                567899***************986666665 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.19
  Zeta_toxin  47 vrldpDdlRelhPeyeeilka..dpkkaseltqkdaselvekllqea 91 
                 + ld+D l+ +     eilk   ++  + ++t+k + e+vek+++++
  KHJ30382.1 141 LLLDTDLLKGFR-GQGEILKWpcKELLVIDVTHKSVNEVVEKIIKHL 186
                 556666665554.3355555322455567899999999999999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       620  (0.0345808); expected 358.6 (0.02)
Passed bias filter:                      558  (0.0311228); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1531.04
//
Query:       KHJ30383.1  [L=158]
Description: putative g patch domain-containing protein 8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.5e-07   29.3   3.1    1.3e-06   28.5   3.1    1.4  1  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
    0.00029   21.1   0.8    0.00068   19.9   0.8    1.6  1  zf-met       Zinc-finger of C2H2 type
  ------ inclusion threshold ------
       0.01   16.0   3.4      0.017   15.2   3.4    1.3  1  zf-DBF       DBF zinc finger
      0.052   13.9   0.2      0.082   13.3   0.2    1.2  1  zf-C2H2_2    C2H2 type zinc-finger (2 copies)
      0.078   13.5   0.6       0.17   12.4   0.6    1.6  1  zf-C2H2      Zinc finger, C2H2 type
       0.11   13.4   0.3       0.24   12.4   0.3    1.5  1  zf-C2H2_4    C2H2-type zinc finger


Domain annotation for each model (and alignments):
>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   3.1   4.5e-10   1.3e-06       2      27 .]      23      50 ..      22      50 .. 0.97

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 4.5e-10
                 CBBTTTTBBBSSHHHHHCCTTS..HHHH CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHlkS..KkHK 27
                 fYC+lC+K +  +n ++ Hl+S  ++HK
   KHJ30383.1 23 FYCELCSKGYARMNEYESHLSSydHSHK 50
                 9*********************999998 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.8   2.3e-07   0.00068       1      22 [.      23      44 ..      23      44 .. 0.97

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 2.3e-07
      zf-met  1 fyCelCnvtfnsesqlksHlqG 22
                fyCelC + +   + ++sHl +
  KHJ30383.1 23 FYCELCSKGYARMNEYESHLSS 44
                8*******************87 PP

>> zf-DBF  DBF zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   3.4   5.7e-06     0.017       2      26 ..      21      48 ..      20      51 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 5.7e-06
      zf-DBF  2 ksGYCEnCrvkf...edleeHlksekHr 26
                ks YCE C++ +   +++e+Hl s  H 
  KHJ30383.1 21 KSFYCELCSKGYarmNEYESHLSSYDHS 48
                799*********44446889*****996 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.2   2.7e-05     0.082      44      79 ..      17      51 ..       9      63 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.7e-05
   zf-C2H2_2 44 rekieekleClyCekefkslealreHmkkkgHckin 79
                re +++ + C +C+k    ++++++H+++ +H   +
  KHJ30383.1 17 REAVKS-FYCELCSKGYARMNEYESHLSSYDHSHKQ 51
                666777.9********99*********999997643 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.6   5.6e-05      0.17       1      23 []      23      47 ..      23      47 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.6e-05
                EEETTTTEEESSHHHHHHHHHC..C CS
     zf-C2H2  1 ykCpdCgksFkrksnLkrHirt..H 23
                ++C+ C+k + r  ++++H+++  H
  KHJ30383.1 23 FYCELCSKGYARMNEYESHLSSydH 47
                89*****************987555 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.3   7.9e-05      0.24       1      21 [.      23      43 ..      23      45 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.9e-05
   zf-C2H2_4  1 fkCpiCgksFsskkaLlrHlk 21
                f+C++C+k + + +++ +Hl 
  KHJ30383.1 23 FYCELCSKGYARMNEYESHLS 43
                89*****************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       846  (0.0471861); expected 358.6 (0.02)
Passed bias filter:                      598  (0.0333538); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.36
# Mc/sec: 1319.25
//
Query:       KHJ30384.1  [L=176]
Description: putative pr-1-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-14   54.5   0.2    2.7e-14   54.1   0.2    1.2  1  CAP       Cysteine-rich secretory protein family


Domain annotation for each model (and alignments):
>> CAP  Cysteine-rich secretory protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.1   0.2   1.5e-18   2.7e-14       1     125 [.      40     162 ..      40     163 .. 0.89

  Alignments for each domain:
  == domain 1  score: 54.1 bits;  conditional E-value: 1.5e-18
                 HHHHHHHH...HHTT----EE-HHHHHHHHHHHHHHHHH...T---S-GGG--HHHHHHTT-TEEEEEES--CCCHHHHHHTSHH.............. CS
         CAP   1 leahNeyR...aaaglppLkwdatLekaAqdhardcaash..sdsssspeggdllkyaenagkeniaaaseaaedavdsWysepgtynkgketegs... 91 
                 l++hN+ R        p L w+++L+ aA ++a+++a+ +   +ssss++g++l++++ +           +   a+ +W +e   y+ ++   g    
  KHJ30384.1  40 LQVHNQARikaVGPERPSLIWSESLAGAAHTWAKHLANENtlKHSSSSGQGENLFSRIGKGK--------ATFAMAATAWVDEMPLYQGEAIPVGDfea 130
                 68999999854334456699****************99999*********************........788888888******99988888888*** PP

                 ..HHHHHT-SS--EEEEEEEEBTTS-E..EEEEE CS
         CAP  92 ighftnllwpkstkvGcavatcgngsftfivvcn 125
                  gh+t+++wp++++vG+a a++++g+   +vv  
  KHJ30384.1 131 YGHYTQVIWPNTREVGMASAKSKQGWT--YVVAR 162
                 *************************87..88765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       358  (0.0199677); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1303.40
//
Query:       KHJ30385.1  [L=134]
Description: hypothetical protein EV44_g3324 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       316  (0.0176251); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 998.13
//
Query:       KHJ30386.1  [L=391]
Description: putative gtp cyclohydrolase-2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-59  198.9   0.0    5.7e-59  198.4   0.0    1.2  1  GTP_cyclohydro2  GTP cyclohydrolase II


Domain annotation for each model (and alignments):
>> GTP_cyclohydro2  GTP cyclohydrolase II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  198.4   0.0   3.2e-63   5.7e-59       5     163 .]     129     351 ..     125     351 .. 0.93

  Alignments for each domain:
  == domain 1  score: 198.4 bits;  conditional E-value: 3.2e-63
                      EEEEEETTEE....EEEEEE--.....EEEEEE-.........................................................EEE CS
  GTP_cyclohydro2   5 eaklptrfge....frliayedkvdgkehlalvkgdi....................................................pvlvR 42 
                      +a++pt+ g+    + l+ y+++ d+kehla+v+g+                                                      +lvR
       KHJ30386.1 129 RARIPTTLGSsgtdMFLHLYQNSEDSKEHLAIVFGNSirsrsldrvregetemdrlirgayvgrlypgrtrsdlpgevkdldehqekmeSPLVR 222
                      67777766542213679******************999************************************************999668** PP

                      EEE--HHHHHS-B--TTTTTHHHHHHHHHH......HH-.EEEEEE--TTTTTHHHHHHHHHHHHHCT--HHHHHHHHT--S-----HHHHHHH CS
  GTP_cyclohydro2  43 vHsecltgDvlgslrcdcgeqldealelia......eegrGvlvylrqegrgigllnklkayalqdeglDTveanlalglpadardygiaaqIL 130
                      +Hsec+tg++ +s+rcdcgeqldea++l++       + +Gv++ylrqegrgigl++klkay+lqd g+DTveanl l++pad r+yg+a+++L
       KHJ30386.1 223 IHSECYTGETVWSARCDCGEQLDEAARLMSvpthdnPHPSGVIIYLRQEGRGIGLGEKLKAYNLQDLGSDTVEANLLLRHPADSRSYGLATAML 316
                      *****************************88888876777****************************************************** PP

                      HHTT--EEEEE-S-HHHHHHH..CTT....SEEEE CS
  GTP_cyclohydro2 131 kdlgvkkirLlTnnpekveaL..egfgievvervp 163
                       dlg++++rLlTnnpek++a+   +++i v+ervp
       KHJ30386.1 317 LDLGITQVRLLTNNPEKIRAIegPNREIVVNERVP 351
                      *********************76678999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       308  (0.0171789); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2984.35
//
Query:       KHJ30387.1  [L=475]
Description: putative of heme oxygenase superfamily [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      7e-12   45.6   0.0    3.8e-10   39.9   0.0    2.5  3  Heme_oxygenase  Heme oxygenase
  ------ inclusion threshold ------
      0.032   14.0   0.2        0.1   12.4   0.2    1.8  2  DUF2153         Uncharacterized protein conserved in archaea 
      0.097   12.4   0.2       0.24   11.2   0.2    1.6  1  Scm3            Centromere protein Scm3


Domain annotation for each model (and alignments):
>> Heme_oxygenase  Heme oxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.014        83       2      30 ..      12      40 ..      11      76 .. 0.75
   2 !   39.9   0.0   6.3e-14   3.8e-10      62     203 ..     124     323 ..     118     325 .. 0.85
   3 ?   -3.0   0.0      0.89   5.3e+03      57      91 ..     374     408 ..     364     416 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.014
                    SHHHHHHHHTHHHHHHHHTSHHHHHHHTT CS
  Heme_oxygenase  2 alakeLreaTkdvHneaenlvfvkeflkg 30
                    +l+++++ aT+++H+ ++nl   + +l++
      KHJ30387.1 12 SLSERINSATRAAHSHLNNLILERLPLAL 40
                    689***************99877777665 PP

  == domain 2  score: 39.9 bits;  conditional E-value: 6.3e-14
                     TTCGGGS-GGG--HHHHHHHHHHHHS...TTHHHHS--...-HHHHHHHHHHHHHHHH-GGGHHHHHHHHHHHHHHHH.HHHHH........... CS
  Heme_oxygenase  62 pviapilfpeLhRkaaLerdlaylyg...sdwrkdiei...spavqkyverlekiaaeepellvAhaYtrylgdLSGG.qllkk........... 138
                      v+ ++ +p L R+++L  d+a l +   +d  ++i++    + + k ++++++ + ++p+ l+A+a++ y++  SGG +++             
      KHJ30387.1 124 SVLRLLRLPDLTRSESLRADIANLMSiekDDVTEKIQLalkNSSASKFLHHIRNNVTQNPHVLMAYAWVLYMALFSGGrYIFASlkkaagrgief 218
                     567788899***************9863244455666522234567889999999999********************555555888******** PP

                     ......................................HHHHHHT-SSSSSSGGGGH-TTSSSHHHHHHHHHHHHHCS-..--HHHHHHHHHHHH CS
  Heme_oxygenase 139 ......................................iaaralelpeeceatafyefesisdrkvfkqeYreaLdsle..lddearaavveeAr 193
                                                            + ++++ ++++ +++f+ f + ++ +  k+e++++  + e  l+++++ +++ eA+
      KHJ30387.1 219 weqdpcvilqhyqdkkgskpeeqlsvplpsskkhipaySTSSTTIGSKTIPGLQFFCFTGDENGEDIKTEFKKRFKTAEnlLTNNEKIEIILEAQ 313
                     **********************************9998778888889999*********97788888888888887776558999999******* PP

                     HHHHHHHHHH CS
  Heme_oxygenase 194 eaFrlnievv 203
                       F++ ie+v
      KHJ30387.1 314 YIFKYMIEIV 323
                     *****99987 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 0.89
                     HCTTSTTCGGGS-GGG--HHHHHHHHHHHHSTTHH CS
  Heme_oxygenase  57 enkdspviapilfpeLhRkaaLerdlaylygsdwr 91 
                     e  +s +++ ++  +++R   +++ +++++g + r
      KHJ30387.1 374 ETWESIFLDYTAKNRMKRVVGFKKPFTFFKGRRHR 408
                     55555666667777889999999999999997766 PP

>> DUF2153  Uncharacterized protein conserved in archaea (DUF2153)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.4   8.2e+03      50      59 ..     217     226 ..     202     230 .. 0.79
   2 ?   12.4   0.2   1.8e-05       0.1      10      51 ..     287     328 ..     283     333 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.4
     DUF2153  50 dqWLqdPvii 59 
                 + W qdP++i
  KHJ30387.1 217 EFWEQDPCVI 226
                 67999**987 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 1.8e-05
     DUF2153  10 kelletlkkvekkveeaDRLdlilasraafqhmmrtlkaFdq 51 
                  e+++ +k +e+ + +++++++il+++ +f++m+ ++ + d 
  KHJ30387.1 287 TEFKKRFKTAENLLTNNEKIEIILEAQYIFKYMIEIVLNLDM 328
                 578999****************************99887775 PP

>> Scm3  Centromere protein Scm3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   3.9e-05      0.24       4      24 ..     364     384 ..     362     387 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.9e-05
                 HHHHHHHHHHHHHHHHHHHHH CS
        Scm3   4 lreesderlkkrwesifeKYe 24 
                 l++ s++r k++wesif +Y 
  KHJ30387.1 364 LQKTSTQRIKETWESIFLDYT 384
                 7899*************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (475 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       725  (0.0404373); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3398.16
//
Query:       KHJ30388.1  [L=1599]
Description: putative dna topoisomerase 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.1e-124  416.7   1.2   2.4e-124  415.5   0.0    2.0  2  DNA_topoisoIV  DNA gyrase/topoisomerase IV, subunit A
      9e-51  171.5   0.3    3.1e-50  169.7   0.3    2.0  1  TOPRIM_C       C-terminal associated domain of TOPRIM
    2.9e-27   95.3   4.5    2.9e-27   95.3   4.5    2.2  2  DNA_gyraseB    DNA gyrase B
    2.2e-15   57.2   0.1      6e-15   55.7   0.1    1.8  1  HATPase_c      Histidine kinase-, DNA gyrase B-, and HSP90-li
    5.3e-06   26.6   0.1    3.6e-05   23.9   0.0    2.5  2  Toprim         Toprim domain
  ------ inclusion threshold ------
        3.9    7.6   8.9        8.6    6.5   8.9    1.5  1  DUF3785        Protein of unknown function (DUF3785)


Domain annotation for each model (and alignments):
>> DNA_topoisoIV  DNA gyrase/topoisomerase IV, subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.5      0.21   6.4e+02     165     261 ..     306     410 ..     298     532 .. 0.60
   2 !  415.5   0.0  8.2e-128  2.4e-124       1     426 []     812    1269 ..     812    1269 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.21
  DNA_topoisoIV 165 allkgeea.ellelvlgPdfptgggiigkeeikeayetgrGkikvrakveiee..ktivitElPigvntskliekieelv..kkk...kik.isdi 251
                    a ++++++ + +++  +Pd++ +++   +++++  ++     + + ++v++ +   +  i  l +++  + + + i+     +++   k++ i + 
     KHJ30388.1 306 ARISNSKTsDFTRVTFTPDYKRFKMDGIDSDFEALMKR--RVYDMAGTVKKVKvfLNGSIIKLDFKKYMEMYAKAISRERgiESSeneKVTvIVEN 399
                    56666666678888899999999887633332222222..24444444332111124444444444444444444443332211112233333333 PP

  DNA_topoisoIV 252 rdesdr.gvri 261
                    ++  d+ +v +
     KHJ30388.1 400 SETHDKwEVGF 410
                    33333333333 PP

  == domain 2  score: 415.5 bits;  conditional E-value: 8.2e-128
  DNA_topoisoIV    1 RaiPsvrDGlKPvqRriLyamfkllnldkkekKvaqlvGev..lgkYhPHGdaslydaivrlaqdfvg..niplldpqGnfGsildgdkd.Aaa 89  
                     R+iPsv+DG+KP+qR++++a+fk +nl  +++Kv++l+G+v   ++Yh HG+as+ ++i++laq+fvg  ni++l+p+G fGs+l g++d A++
     KHJ30388.1  812 RSIPSVIDGFKPGQRKVMFACFK-RNL-IRDMKVVELAGYVseNTAYH-HGEASMHQTIIGLAQNFVGsnNINCLEPSGSFGSRLAGGSDaASP 902 
                     9**********************.899.9*************999***.********************************************* PP

  DNA_topoisoIV   90 RYietrLskiarellkeidketvdyqenyDgsekEPevlppiiPnlLvnGaeGIavGmatkipphnlkeiidaliallkgeea....ellelvl 179 
                     RYi+trLs++ar++++ +d+++ + + + Dg+++EP++++pi+P++L+nGa+GI++G++t+ip++++ +i+++l++ +   +     + +e  +
     KHJ30388.1  903 RYIFTRLSPFARRVFSAQDEPIYEHNVD-DGRSIEPVMYCPIVPMVLINGADGIGTGWSTTIPNYHPIDIVNNLKRRMGRLDDskeeKPFE-TM 994 
                     ****************************.***********************************************985433333346677.8* PP

  DNA_topoisoIV  180 gPdfptgggiigkeeikeayetgrGkikvrakveieektivitElPigvntskliekieelvkkkkik..isdirdesdr.gvrivielkrgas 270 
                     +P+f++++g +++++   +y+ + G  ++ a      ++++itElPi+++t++++ k+e+++k +k    i+d+++++d+ +v++ i+l+++  
     KHJ30388.1  995 KPWFRGWKGNVEEAG-PMRYNFN-GVARLAAP-----SEVEITELPIRMWTDDFKAKLEDIIKGEKAPsfIKDYKEYNDHkSVHFIIQLDEKNI 1081
                     ***********8888.9999999.99999998.....47***********************76655559*******7776**********999 PP

  DNA_topoisoIV  271 eekvleklykktkLessisvnnlvlfdk.k..pkylslkeilkeflevrlevyerrkeyllekleerleilegllkalnkidevievirkskk. 360 
                     +++++e+l++k+kL++si+++nlv+fd  +  +ky ++++il+e++  rle+y++rk+y l+k++ ++++l+      n++++v+e+i+++++ 
     KHJ30388.1 1082 KADIEENLLEKFKLQKSIATSNLVAFDTrGqiRKYEKVEDILEEYYVYRLEMYTKRKTYWLDKIDTEYRKLK------NQARFVLEIIDNKLVv 1169
                     9999999*********************6489****************************************......***************9 PP

  DNA_topoisoIV  361 ekkakkeLieelse....................................eqaeyllemrlrrLtkeeveklekeieelekeikelekllaklk 418 
                     ++k+k+ L++el++                                    ++++yll++++++Lt+e+v+kl++++ +++ke+++l+ l++k  
     KHJ30388.1 1170 SRKKKSILVNELRQrgyeafpkgrdspvttsndnsvendddigaeedggaRDFDYLLSLPIWSLTQERVDKLKDQMLNKKKEHDDLKILSEK-- 1261
                     9999999*******************************************99***********************************99999.. PP

  DNA_topoisoIV  419 klikeeld 426 
                     +l+ ++ld
     KHJ30388.1 1262 DLWCKDLD 1269
                     *****996 PP

>> TOPRIM_C  C-terminal associated domain of TOPRIM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.7   0.3     1e-53   3.1e-50       1     128 []     678     810 ..     678     810 .. 0.96

  Alignments for each domain:
  == domain 1  score: 169.7 bits;  conditional E-value: 1e-53
    TOPRIM_C   1 FitPivkvtkk...k..keeisffslpeyeewkestenlkkwkikYYkGLgtstskeakeyfsnldkhlkefkleeeedkeaielaFskkkaderkewl 94 
                 FitPivkv+k+   k   +++sff+lpeyeew+e+++n k+w++kYYkGLgts  ++a+ yfsnld+hl+ef++ + e++e+ielaFskkkad+rk+wl
  KHJ30388.1 678 FITPIVKVWKGpnpKkpLSQRSFFTLPEYEEWRERHSNDKGWRHKYYKGLGTSLPEDAQIYFSNLDDHLREFETIKPEEEELIELAFSKKKADARKQWL 776
                 9********99765245568******************************************************************************* PP

    TOPRIM_C  95 kklepgtyldkkkkkisysdFvnkeLilfsmadn 128
                  +++pgtyld+++++++y++FvnkeLilfsmadn
  KHJ30388.1 777 GNFVPGTYLDHSTRTLTYDNFVNKELILFSMADN 810
                 *********************************8 PP

>> DNA_gyraseB  DNA gyrase B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   1.0      0.49   1.5e+03     131     170 ..      26      65 ..      20      68 .. 0.87
   2 !   95.3   4.5   9.7e-31   2.9e-27       3     168 ..     369     534 ..     367     539 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.49
  DNA_gyraseB 131 ivekvvseeleafleenkeeakkilekaveaakareaark 170
                  + +k v+++++++ +e+k  akk+++  +++ ka  ++r+
   KHJ30388.1  26 AAKKPVTKKVSRTTKETKLPAKKLIQTTLKKPKATTKKRQ 65 
                  6677899999***********************9999987 PP

  == domain 2  score: 95.3 bits;  conditional E-value: 9.7e-31
  DNA_gyraseB   3 kdfveelnkdkkel.......ikevlsvegekaveevievevalqwtssysenilsFvNniatpeGGtHvdgfksaltktlneyakkkkllkkkeeki 93 
                  k ++e+++k+ ++         ++v  + +++++++++ev +a+   s+ s +++sFvN+iat++GGtHv+++++++ ++l +++kkk+   k++  +
   KHJ30388.1 369 KKYMEMYAKAISRErgiesseNEKVTVIVENSETHDKWEVGFAV---SDGSFQQVSFVNSIATTSGGTHVNYIADQICEKLMDVVKKKNA--KGA-IL 460
                  6777777777322233343333333333333434666*******...65666***********************************997..444.9* PP

  DNA_gyraseB  94 sgediregltavvsvkipepqFeGQTKekLgnsevksivekvvseeleafleenkeeakkilekaveaakareaa 168
                  + ++ir++++++v++ i +p F++QTKe+L+++  +   + v+++++ + + + ++++++il++a ++a++ +a+
   KHJ30388.1 461 KTNQIRNHIFLFVNCLIVNPAFTSQTKEQLTTRPKQFGSKCVLTDKFLKEIAK-TDAVQNILNFAQAKADQVLAK 534
                  ****************************************************9.99************9998876 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   0.1     2e-18     6e-15       4     110 ..     181     325 ..     179     327 .. 0.76

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 2e-18
                 HHHHHHHHHHHHHHHHHHS...TTTEEEEEEEEEETEEEEEEEESSSSSTTHHHT........GTCSTTCH.....HCSTCHTSTSSSHHHHHH..... CS
   HATPase_c   4 krLrqiisnlvdNavkfat...kageieveikaseddlvisveDnGiGipkedlk........klfekfsq.....ddstkrggggtGlGlsiv..... 81 
                 ++L++i+++++ Na+++++   +++ i+v+i+ + ++ +isve++G+Gip e++k        ++f+++ +     dd++k++gg++G+G++++     
  KHJ30388.1 181 PGLYKIFDEILVNAADHKQvdpSMKYIKVNID-R-EKGEISVENDGRGIPIEIHKkekvyipeMIFGHLLTgsnydDDEEKTTGGRNGYGAKLCnifst 277
                 689**************4444589999*****.4.59**************************999988878889889****************55555 PP

                 ...............HH.HHHHTT..TEEEE.EEETTTEEEEEEEEES CS
   HATPase_c  82 ...............kk.lvelmg..Geiwv.esepgrGttftftlpl 110
                                k+ +++ m   G+ ++ +s+    t++tft++ 
  KHJ30388.1 278 eftletqdsgngkryKQtWTQNMSkmGKARIsNSKTSDFTRVTFTPDY 325
                 555555555555554332333344445666633444668889998875 PP

>> Toprim  Toprim domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   1.2e-08   3.6e-05       2      88 ..     564     662 ..     563     680 .. 0.76
   2 ?   -2.6   0.1       2.1   6.3e+03      12      52 ..    1097    1139 ..    1078    1164 .. 0.61

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 1.2e-08
                 EEEESSHHHHHHHHHTHT...STEEEEEEESSSSEEEHS.TTEEEEE..ECTTTHHHHHH.....HHHHH.HHHSEEEEECSSSHHHHHHHHHHHHHHT CS
      Toprim   2 lvivEgpsdaktiakalg...sgfqavtaslGhildlet.efkpvye..eiedkkkvlka.....lkela.kradeiilatDpDreGeaiawellevlk 88 
                 l++ Eg+s+ + +   +    ++   v++++G++l++ +  ++++ +  ei+++k+ l+       ke   +r+ +++++ D D +G++i+ +l+++l+
  KHJ30388.1 564 LILTEGDSAKGLAVAGRAildPDRIGVFPLRGKLLNVRDaTIDQISKnaEIQNIKQFLGLkhkqvYKETTgLRYGHLMIMADQDHDGSHIKGLLINFLQ 662
                 8899999976665555445559*****************533333336666666666666777756666699***********************9887 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.1
                  HHHHHTHTSTEEEEEEESSSSEEEHS...TTEEEEE...ECTTTHHH CS
      Toprim   12 ktiakalgsgfqavtaslGhildlet...efkpvye...eiedkkkv 52  
                  k+ia     ++++++ ++G i++ e+   ++++ y    e+++k+k+
  KHJ30388.1 1097 KSIA----TSNLVAFDTRGQIRKYEKvedILEEYYVyrlEMYTKRKT 1139
                  3333....458888999999999999665444444466644444443 PP

>> DUF3785  Protein of unknown function (DUF3785)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   8.9    0.0029       8.6       3     117 ..    1057    1170 ..    1055    1175 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0029
     DUF3785    3 fvydekeyvlseenlegllndeeneveglsldkileilneseevdfskeyykekceeckegveekkk.sfafleyhfyiytkdnkyvistiekeyeg 98  
                  f+ d key  ++  ++ +++ +e+++++   +++le ++ +++++ s+    ++  +   + e+++    ++  y++ +ytk ++y +++i+ ey++
  KHJ30388.1 1057 FIKDYKEYNDHK-SVHFIIQLDEKNIKADIEENLLEKFKLQKSIATSNLVAFDTRGQI-RKYEKVEDiLEEYYVYRLEMYTKRKTYWLDKIDTEYRK 1151
                  888899997555.456666667788887666788999988888888887655555566.4444444404568999********************** PP

     DUF3785   99 lsfnkllragkvddsyivs 117 
                  l     +  + +d+  +vs
  KHJ30388.1 1152 LKNQARFVLEIIDNKLVVS 1170
                  *999999999999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1599 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1152  (0.0642534); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.92u 0.29s 00:00:01.21 Elapsed: 00:00:00.44
# Mc/sec: 10847.06
//
Query:       KHJ30389.1  [L=227]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       384  (0.0214178); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1696.67
//
Query:       KHJ30390.1  [L=628]
Description: putative double-strand-break repair protein rad21 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.9e-36  124.0   0.0    1.5e-35  121.7   0.0    2.1  2  Rad21_Rec8_N  N terminus of Rad21 / Rec8 like protein
    6.4e-05   22.1   0.0    0.00014   21.0   0.0    1.6  1  Rad21_Rec8    Conserved region of Rad21 / Rec8 like protein


Domain annotation for each model (and alignments):
>> Rad21_Rec8_N  N terminus of Rad21 / Rec8 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.7   0.0   1.6e-39   1.5e-35       1      99 [.       1      98 [.       1     106 [. 0.93
   2 ?   -1.4   0.0      0.29   2.6e+03      25      38 ..     415     432 ..     390     441 .. 0.63

  Alignments for each domain:
  == domain 1  score: 121.7 bits;  conditional E-value: 1.6e-39
  Rad21_Rec8_N  1 MfysqellskkgplakvWlaAtlekklskkeilevniekaveeIlnp.eaplaLrlsgqLllGvvriyskkvkyllsDceealekikkafksikeakid 98
                  Mfys++llsk+gpla+vWl A++e+klsk+++l++n++++v++I++p +aplaLrl+gqLllGv+riy++k+ yll+Dc+eal+kik+af+++   + d
    KHJ30390.1  1 MFYSESLLSKTGPLARVWLSANIERKLSKNHVLQTNVKDSVDAIVTPnQAPLALRLTGQLLLGVARIYRRKAIYLLDDCNEALIKIKMAFRTSG--NND 97
                  9*********************************************6488*****************************************764..344 PP

  Rad21_Rec8_N 99 l 99
                  +
    KHJ30390.1 98 M 98
                  4 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.29
  Rad21_Rec8_N  25 k....klskkeilevnie 38 
                        +l++k++ +++i 
    KHJ30390.1 415 LnaiqNLKRKQLHDTDIL 432
                   033448999999999985 PP

>> Rad21_Rec8  Conserved region of Rad21 / Rec8 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   1.6e-08   0.00014       9      51 ..     560     605 ..     553     609 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 1.6e-08
                 ----.-----HHHHHHHHHHHHHHHHTSEEEEESSTT..--EEEEE CS
  Rad21_Rec8   9 sllp.agktRkeAArlFyelLvLatkgvIkvkQeaPY..gdIlitl 51 
                  llp +  tR  A + F+e+LvL tk ++k++Q++    g+I+i++
  KHJ30390.1 560 ELLPfSSVTRADATKFFFEILVLGTKNAVKAEQSQSVlgGSITISP 605
                 556667789************************7542225666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (628 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4388.15
//
Query:       KHJ30391.1  [L=304]
Description: hypothetical protein EV44_g1304 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.05   14.1   0.2       0.12   12.8   0.2    1.7  1  CYYR1     Cysteine and tyrosine-rich protein 1
      0.062   11.2   0.1      0.091   10.7   0.1    1.2  1  Nup188    Nucleoporin subcomplex protein binding to Pom34


Domain annotation for each model (and alignments):
>> CYYR1  Cysteine and tyrosine-rich protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   1.4e-05      0.12      41      96 ..       6      59 ..       1      67 [. 0.85

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.4e-05
       CYYR1 41 csyyayvgdvlsgtaiagivfgvvflmgvvagialcvcmcvknsrgtrvgvlraay 96
                c+y      v s ++iag+   + f++ + a+i++   + +k++r  +v v+r   
  KHJ30391.1  6 CTYVP--TTVESNSSIAGVGVLLSFILTAGASILMSGIIILKENRKKKVQVIRKML 59
                55443..4678999**************************************9765 PP

>> Nup188  Nucleoporin subcomplex protein binding to Pom34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1     1e-05     0.091     773     814 ..      97     136 ..      84     142 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 1e-05
      Nup188 773 llniiesgsd.nlesielsdisgqlydqliqlslslanllisi 814
                 ll+   ++++ n+  ++++d+ g +++++i++s+ + nl++s+
  KHJ30391.1  97 LLS---TVTHiNTLLALVNDFKGDWVMRWIRQSFMFINLVLSV 136
                 333...33333677788999*********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2314.66
//
Query:       KHJ30392.1  [L=135]
Description: hypothetical protein EV44_g3476 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.041   14.0   1.9      0.069   13.3   1.9    1.4  1  NOB1_Zn_bind  Nin one binding (NOB1) Zn-ribbon like


Domain annotation for each model (and alignments):
>> NOB1_Zn_bind  Nin one binding (NOB1) Zn-ribbon like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.9   3.8e-06     0.069      18      68 ..      26      76 ..      12      80 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.8e-06
  NOB1_Zn_bind 18 tkdmtkkFCpkCGnktLkrvavsvdengelklhlkknfqlnlrGtkyslpk 68
                  + +     C +CG k +  +++   ++  + +  + ++++++r ++y + +
    KHJ30392.1 26 CAKLGHCMCANCGGKYMANASTCAVHKQAIAIARNGRKEWKKREKEYEIRS 76
                  55566678***********999999999999999999**********9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1061  (0.0591779); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 1116.38
//
Query:       KHJ30393.1  [L=375]
Description: hypothetical protein EV44_g3899 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-06   28.3   0.1    3.9e-06   26.6   0.1    1.9  1  gag_pre-integrs  GAG-pre-integrase domain
      0.009   15.4   0.1      0.019   14.3   0.1    1.5  1  Ofd1_CTDD        Oxoglutarate and iron-dependent oxygenase de
  ------ inclusion threshold ------
      0.027   14.6   0.1      0.059   13.5   0.1    1.6  1  Integrase_H2C2   Integrase zinc binding domain


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.1   6.5e-10   3.9e-06      20      66 ..     257     307 ..     244     308 .. 0.78

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 6.5e-10
  gag_pre-integrs  20 nkssinlWHrRLGHpsfsrlkkLfkkgl...lpglkisk.sevCeaCqlgK 66 
                      +++++++ HrR+GHps +rl ++ k +    +++++i+  +++C  Cq+ K
       KHJ30393.1 257 TETELRRLHRRFGHPSAQRLYTILKPSGhneVDKKNIDYlNKFCNYCQKNK 307
                      5788999***************998444133555555436889******99 PP

>> Ofd1_CTDD  Oxoglutarate and iron-dependent oxygenase degradation C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   3.2e-06     0.019       8     128 ..     249     362 ..     244     370 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 3.2e-06
                 TTB-GGGTSHHHHHHHHHHHHHHSEEEESS-B-HHHHHHHHHHH..HHHHHHS----SGGG--TT-EE-B-TTTEE-EEE-SSS----SSHH.....HH CS
   Ofd1_CTDD   8 kylnpeYLtketveelqeqfeeessieledfLkkeiaeklkksleseekekekelpqkseeiekpWkvagPphkqrylyldseeatekkeee.....da 101
                  y+np +Lt+  +++l+ +f   s  +l  +Lk++ ++++ k+  +  ++            + + k +gPp++ r+ +++++ + +++ +      + 
  KHJ30393.1 249 FYMNPCFLTETELRRLHRRFGHPSAQRLYTILKPSGHNEVDKKNIDYLNKF----------CNYCQKNKGPPQRFRFKIQEKDIQFNHSINVdimyiE- 336
                 59************************************9977642322222..........3345577899999999966655555444433666643. PP

                 HHHHHHHH.HHHHSHHHHHHHHHHHSE CS
   Ofd1_CTDD 102 eeklkeLlekllkskafrkwlalitgl 128
                 ++++ +   +   s +  +wl++it+ 
  KHJ30393.1 337 NNPILHTI-DDATSYQAARWLKNITNK 362
                 33333333.345677777888888875 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   9.8e-06     0.059       6      57 ..     257     308 ..     252     309 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 9.8e-06
  Integrase_H2C2   6 rkeilkeaHdsagHlGiektlerlrrryyWpgmrkdvkkyvksCetCqrrkp 57 
                     +++ l+++H   gH+++++ +  l+   +    +k +    k C  Cq++k 
      KHJ30393.1 257 TETELRRLHRRFGHPSAQRLYTILKPSGHNEVDKKNIDYLNKFCNYCQKNKG 308
                     566799********************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2785.42
//
Query:       KHJ30394.1  [L=440]
Description: hypothetical protein EV44_g2474 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1457  (0.081265); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3236.93
//
Query:       KHJ30395.1  [L=391]
Description: putative pre-mrna-splicing factor 38b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.038   13.9   0.3       0.13   12.1   0.0    2.0  2  HlyD_D4    Long alpha hairpin domain of cation efflux system 
       0.49   10.6   0.0       0.49   10.6   0.0    2.1  2  DUF2407_C  DUF2407 C-terminal domain


Domain annotation for each model (and alignments):
>> HlyD_D4  Long alpha hairpin domain of cation efflux system protein, CusB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.34   3.1e+03      23      37 ..      76      90 ..      67      92 .. 0.69
   2 ?   12.1   0.0   1.5e-05      0.13      33      54 ..     341     362 ..     326     364 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.34
                T--HHHHHHHHHHHH CS
     HlyD_D4 23 gdlaslldaareRlr 37
                 +l+sl +aa eR +
  KHJ30395.1 76 ERLKSLQNAASERCK 90
                456677777777765 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 1.5e-05
                 HHHHHHCT--HHHHHHHHHHTS CS
     HlyD_D4  33 reRlrLaGMpdadIrrleasgK 54 
                  eRlr aG  +++I+rle+ g 
  KHJ30395.1 341 IERLRCAGFTEEEIQRLERGGQ 362
                 59****************9875 PP

>> DUF2407_C  DUF2407 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   3.1       1.7   1.6e+04      42      42 ..     165     165 ..     119     226 .. 0.53
   2 ?   10.6   0.0   5.4e-05      0.49       2      21 ..     340     359 ..     339     388 .. 0.79

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 1.7
   DUF2407_C  42 e 42 
                 +
  KHJ30395.1 165 K 165
                 0 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 5.4e-05
   DUF2407_C   2 GFDRLlsaGfseeeieaLRs 21 
                 G +RL+ aGf+eeei+ L +
  KHJ30395.1 340 GIERLRCAGFTEEEIQRLER 359
                 889*************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2028  (0.113113); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 2752.63
//
Query:       KHJ30396.1  [L=415]
Description: hypothetical protein EV44_g3570 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1236  (0.0689386); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2962.21
//
Query:       KHJ30397.1  [L=354]
Description: hypothetical protein EV44_g3379 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-09   37.9   0.0    3.1e-09   37.1   0.0    1.4  1  rve       Integrase core domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0   1.7e-13   3.1e-09      26     117 ..       8      98 ..       3     100 .. 0.95

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 1.7e-13
         rve  26 llvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpqdnGkvErfhrtlkd 117
                 +l+vvd ++r+  a  l+++++++ + al  + ++ + g  p++++ D g+ +ts++f + ++ l i+ +++++ ++++ G+vEr h+ l++
  KHJ30397.1   8 VLHVVDEATRFQAAKWLKNMSSQHIWEALRMCWIDVYLGP-PDIINHDAGTNFTSHEFLQNAQALAIETKTAPVESANSMGIVERYHKPLRR 98 
                 789*****************99999999999999999998.***********************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2548.57
//
Query:       KHJ30398.1  [L=703]
Description: hypothetical protein EV44_g4218 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-10   40.3   0.0    5.8e-10   39.4   0.0    1.5  1  rve              Integrase core domain
      0.007   16.2   2.0       0.01   15.7   0.3    2.2  2  gag_pre-integrs  GAG-pre-integrase domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.4   0.0   6.5e-14   5.8e-10       5     117 ..     387     492 ..     384     494 .. 0.93

  Alignments for each domain:
  == domain 1  score: 39.4 bits;  conditional E-value: 6.5e-14
         rve   5 gelwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpq 103
                 ++ + +Dv++++    g  + +l+vvd ++r+  a  l+++++++ + al  + ++ + g  p++++ D g+ +ts++f + ++ l i+ +++++ +++
  KHJ30398.1 387 NHSIFMDVMYID----G--SPVLHVVDEATRFQAAKWLKNMSSQHIWEALRMCWIDVYLGP-PDIINHDAGTNFTSHEFLQNAQALAIETKTAPVESAN 478
                 567889999999....5..78999*****************99999999999999999998.************************************* PP

         rve 104 dnGkvErfhrtlkd 117
                 + G+vEr h+ l++
  KHJ30398.1 479 SMGIVERYHKPLRR 492
                 **********9987 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1      0.44   3.9e+03      54      64 ..      47      57 ..      27      58 .. 0.50
   2 !   15.7   0.3   1.1e-06      0.01      17      63 ..     316     367 ..     300     369 .. 0.70

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.44
  gag_pre-integrs 54 sksevCeaCql 64
                        + C +Cq+
       KHJ30398.1 47 TPVKRCFICQK 57
                     22557889987 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 1.1e-06
  gag_pre-integrs  17 lsknkssinlWHrRLGHpsfsrlkkLf.kkgllpglkisk....sevCeaCq 63 
                      +  ++++++  HrR+GHps  +l +L  k g++++ +       ++ C  Cq
       KHJ30398.1 316 CYLTETELRTLHRRFGHPSAIKLLNLLeKAGHNDRTHRRLleaiNNNCAKCQ 367
                      444789999**********877666661567766665422233466788887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (703 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4770.50
//
Query:       KHJ30399.1  [L=577]
Description: hypothetical protein EV44_g3633 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.6e-09   36.8   0.1    6.7e-09   36.0   0.1    1.4  1  rve              Integrase core domain
     0.0092   15.8   0.3      0.024   14.5   0.3    1.7  1  gag_pre-integrs  GAG-pre-integrase domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.1   7.4e-13   6.7e-09       6     117 ..     217     321 ..     213     323 .. 0.92

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 7.4e-13
         rve   6 elwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpqd 104
                 + + +Dv++++    g  + +l+vvd ++r+  a  l+++++++ + al  + ++ + g   ++++ D g+ +ts++f + ++ l i+ +++++ ++++
  KHJ30399.1 217 HSIFIDVMYID----G--SPVLHVVDEATRFQAAKWLKNMSSQHIWEALRMCWIDVYLGP-RDIINHDAGTNFTSHEFLQNAQALAIETKTAPVESANS 308
                 66788888888....5..78999*****************99999999999999999998.7************************************* PP

         rve 105 nGkvErfhrtlkd 117
                  G+vEr h+ l++
  KHJ30399.1 309 MGIVERYHKPLRR 321
                 *********9987 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.3   2.7e-06     0.024      17      51 ..     145     180 ..     129     197 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.7e-06
  gag_pre-integrs  17 lsknkssinlWHrRLGHpsfsrlkkLfk.kgllpgl 51 
                      +  ++++++  HrR+GHps  +l +L +  g++++ 
       KHJ30399.1 145 CYLTETELRTLHRRFGHPSAIKLLNLLEkAGHNDRT 180
                      444789999**********87776666415555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (577 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 4287.28
//
Query:       KHJ30400.1  [L=287]
Description: putative nadh-ubiquinone dehydrogenase 24 kda [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.3e-59  198.5   0.0      6e-59  198.1   0.0    1.2  1  2Fe-2S_thioredx  Thioredoxin-like [2Fe-2S] ferredoxin


Domain annotation for each model (and alignments):
>> 2Fe-2S_thioredx  Thioredoxin-like [2Fe-2S] ferredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  198.1   0.0   3.3e-63     6e-59       2     144 ..      66     212 ..      65     213 .. 0.97

  Alignments for each domain:
  == domain 1  score: 198.1 bits;  conditional E-value: 3.3e-63
                      HHHHTTS-..-GGGGHHHHHHHHHHHHSS--HHHHHHHHHHHTS-HHHHHHHHTTSSSS-SS---SEEEEEE-SHHHHTT..THHHHHHHHHHH CS
  2Fe-2S_thioredx   2 keiiakyp..ekrsaliplLklvQeeegwlpeealeevaellgvppaevyevatFYsmfnlkpvgkyviqvCtttpCalr..gseeilealekk 91 
                       ei+++yp  +k++a++plL+l Q+++g+ + ++++eva++l++pp++vyevatFY+m+n++pvgky++q+CtttpC+l   gs++i++a++++
       KHJ30400.1  66 SEILKRYPpqYKKAAVMPLLDLGQRQHGFTSLSVMNEVARILEMPPMRVYEVATFYTMYNREPVGKYHLQICTTTPCQLGgcGSDAIVAAINNH 159
                      799***************************************************************************954489********** PP

                      HT--TT-B-TTSSEEEEEES--S-GGGSSEEEESSSSEEES-HHHHHHHHHHH CS
  2Fe-2S_thioredx  92 lgikagettadgkftleeveClGaCanaPvvqindevyedltpekveeilekl 144
                      lgi++g+tt+dg ft  eveClGaC+naP+vqind++yedltpe + +il++l
       KHJ30400.1 160 LGITPGHTTEDGLFTYVEVECLGACVNAPMVQINDDYYEDLTPEGIVSILKAL 212
                      **************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       611  (0.0340789); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 2305.69
//
Query:       KHJ30401.1  [L=753]
Description: putative translation initiation regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-47  161.5   1.6    2.6e-23   83.1   0.0    3.3  3  ABC_tran      ABC transporter
    1.8e-20   72.8   6.9    1.8e-20   72.8   6.9    3.4  4  ABC_tran_Xtn  ABC transporter
    3.3e-13   50.1  12.9     0.0024   17.8   0.0    4.7  5  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
    4.2e-11   42.7   1.1       0.02   14.3   0.0    4.5  4  SMC_N         RecF/RecN/SMC N terminal domain
    5.8e-06   26.0   0.3       0.17   11.7   0.0    2.7  2  AAA_29        P-loop containing region of AAA domain
      1e-05   25.5   0.1      0.087   12.9   0.0    2.9  2  MMR_HSR1      50S ribosome-binding GTPase
    1.9e-05   24.6   0.1      0.062   13.2   0.0    2.6  2  RsgA_GTPase   RsgA GTPase
    1.9e-05   25.2   0.3       0.61   10.6   0.0    3.5  3  AAA_18        AAA domain
    2.3e-05   24.7   0.0        0.4   11.0   0.0    3.2  2  AAA_22        AAA domain
    2.7e-05   24.0   0.3       0.29   10.8   0.0    3.1  3  AAA_24        AAA domain
    4.4e-05   24.1  20.9     0.0044   17.5   0.1    4.9  5  AAA_23        AAA domain
    5.6e-05   23.2   0.0       0.65   10.0   0.0    3.2  2  AAA_14        AAA domain
    7.3e-05   23.2   0.6       0.12   12.8   0.1    3.1  2  AAA_16        AAA ATPase domain
    0.00024   21.5   0.0        1.1    9.6   0.1    3.2  2  AAA           ATPase family associated with various cellular 
    0.00025   21.2   0.0       0.65   10.1   0.0    2.9  2  AAA_33        AAA domain
    0.00082   19.1   0.0       0.18   11.5   0.0    3.1  3  AAA_30        AAA domain
    0.00096   19.0  17.1       0.07   12.8   0.0    5.2  6  AAA_15        AAA ATPase domain
     0.0013   18.7   0.5       0.35   10.8   0.0    2.6  2  NACHT         NACHT domain
     0.0016   18.7   3.2       0.35   11.1   0.0    3.1  2  AAA_28        AAA domain
     0.0016   18.8   0.0        2.4    8.6   0.0    2.6  2  RNA_helicase  RNA helicase
     0.0073   16.2   0.0       0.99    9.3   0.0    2.9  2  NTPase_1      NTPase
     0.0075   15.3   0.8        2.5    7.0   0.0    2.7  2  MeaB          Methylmalonyl Co-A mutase-associated GTPase Mea
  ------ inclusion threshold ------
      0.011   15.9   0.1        9.3    6.5   0.0    2.8  2  Roc           Ras of Complex, Roc, domain of DAPkinase
      0.013   15.5   3.4          9    6.3   0.0    3.6  2  Dynamin_N     Dynamin family
      0.017   14.7   0.7        1.9    8.0   0.6    2.5  2  cobW          CobW/HypB/UreG, nucleotide-binding domain
      0.023   14.7   0.2        7.5    6.5   0.0    3.2  3  AAA_5         AAA domain (dynein-related subfamily)
       0.03   14.2   0.3       0.95    9.4   0.1    2.5  2  MobB          Molybdopterin guanine dinucleotide synthesis pr
       0.03   13.9   2.6        5.5    6.5   0.0    3.4  2  AAA_27        AAA domain
      0.032   13.1   0.3          5    5.8   0.1    2.2  2  Adeno_IVa2    Adenovirus IVa2 protein
      0.053   13.2   0.1        7.4    6.1   0.1    2.7  2  SRP54         SRP54-type protein, GTPase domain
      0.053   12.7   1.4        5.9    6.0   0.0    2.8  2  NB-ARC        NB-ARC domain
      0.058   12.9   0.0        7.9    6.0   0.0    2.5  2  AAA_7         P-loop containing dynein motor region
      0.059   13.4   0.0         13    5.8   0.0    2.5  2  TsaE          Threonylcarbamoyl adenosine biosynthesis protei
      0.086   12.1   1.1         12    5.1   0.0    2.8  3  Zeta_toxin    Zeta toxin
       0.12   12.0   0.0        4.1    7.0   0.0    2.4  2  ATP-synt_ab   ATP synthase alpha/beta family, nucleotide-bind
       0.34   11.3   2.8         51    4.3   0.1    3.9  3  AAA_17        AAA domain
        2.3    8.1   5.9         16    5.3   0.0    3.6  4  ATPase_2      ATPase domain predominantly from Archaea


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.2         8   3.9e+03      43      59 ..     135     151 ..      58     181 .. 0.56
   2 !   76.0   0.0   7.9e-24   3.8e-21       1     137 []     216     397 ..     216     397 .. 0.70
   3 !   83.1   0.0   5.3e-26   2.6e-23       1     137 []     549     680 ..     549     680 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 8
                 EETTCEGGGB-HHHCCH CS
                 xxxxxxxxxxxxxxxxx RF
    ABC_tran  43 lldgkdlkeqeleslrk 59 
                 ++d k+l++ e++++ k
  KHJ30401.1 135 KVDRKKLEKAERKIAAK 151
                 22223333333333333 PP

  == domain 2  score: 76.0 bits;  conditional E-value: 7.9e-24
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEE............................EETTCEGGG.B-HHHCCHCEEEE-SS--S CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................xxxxxxxxx.xxxxxxxxxxxxxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGei............................lldgkdlke.qeleslrkeigvlpqepql 70 
                 l + +l+l  g+++++vG+nG GKStLl++la+ +     +i                            +l g+++k  ++l  l+ e          
  KHJ30401.1 216 LTDTNLSLAYGRRYGLVGQNGIGKSTLLRALARRELAIPTHIsilhveqeirgddtpalqavldadvwrkHLLGEQVKIsKQLADLELECNS------- 307
                 57889****************************99998888866777776666666666665555555552222222222222222222222....... PP

                 -TTSBHHHH...............................HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxx...............................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  71 fpeltvren...............................esdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                      ++e+                                ++++++ +l+ lg +  +++ +   ++++SgG++ r+alaral+++p+llllDEp++
  KHJ30401.1 308 -----IAETsinaeklnheresldqtlgdiqaklaemdsdRAESRAASILAGLGFSVERQQFA---TKTFSGGWRMRLALARALFCEPDLLLLDEPSN 397
                 .....2222344444444446666667777777776666677777999999999888666665...8*****************************86 PP

  == domain 3  score: 83.1 bits;  conditional E-value: 5.3e-26
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS..--S-TTSBHHHH.......HHHTCHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxx.......xxxxxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqe..pqlfpeltvren.......esdeeiekals 90 
                 lknv+l+++ +++++ivG+nGaGK+t+lkll+g+l pt+G i            +  r +ig++ q+  + l+ +++           +  ++ e++++
  KHJ30401.1 549 LKNVDLDVQLDSRIGIVGPNGAGKTTILKLLIGNLLPTSGLI-----------SQNPRLRIGYFAQHhiDALDLNTS---AvgfmaknYPGKQDEEYRR 633
                 79****************************************...........678999999999996644444444...1334677777777888888 PP

                 HSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  91 klglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                 +lg  +++ t+  ++++ LSgGqk+rv  a++ l++p +l+lDEp++
  KHJ30401.1 634 HLGAFGITGTTGLQKMELLSGGQKSRVTFACLSLQNPHILVLDEPSN 680
                 8888888888888999*****************************86 PP

>> ABC_tran_Xtn  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.5       1.9   9.2e+02      43      70 ..      73     102 ..      64     112 .. 0.72
   2 ?   -1.5   1.2       5.5   2.7e+03      64      76 ..     138     151 ..     126     166 .. 0.53
   3 !   72.8   6.9   3.6e-23   1.8e-20       2      78 ..     437     514 ..     436     522 .. 0.91
   4 ?   -2.3   0.0       9.7   4.7e+03       4      20 ..     722     738 ..     721     739 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 1.9
  ABC_tran_Xtn  43 leefIerfraka..kkakqaqsrekaLekl 70 
                   ++++ e + a+a   + k+  s +k+L++ 
    KHJ30401.1  73 IQKWLETLDARAsdERRKKNSSTVKRLDQA 102
                   367777777777667888899999999875 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 5.5
  ABC_tran_Xtn  64 ekaLeklek.iekp 76 
                   +k+Lek e+ i+++
    KHJ30401.1 138 RKKLEKAERkIAAK 151
                   34444443312222 PP

  == domain 3  score: 72.8 bits;  conditional E-value: 3.6e-23
  ABC_tran_Xtn   2 elengklteYkG.nYseyleekeerleqqqkayekqqkeikkleefIerfrakakkakqaqsrekaLeklekiekpee 78 
                   + ++++l +YkG n+++++++keer++++q++y++q +++++l++fI++fr++a+k++ aqsr+k+Lek+  +e+pe 
    KHJ30401.1 437 HQHSERLDYYKGaNFESFYATKEERRKTAQREYDNQMQQRAHLQAFIDKFRYNAAKSSEAQSRIKKLEKMPILEAPES 514
                   667899*****99***************************************************************43 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 9.7
  ABC_tran_Xtn   4 engklteYkGnYseyle 20 
                   +ng++++++G+ ++y +
    KHJ30401.1 722 DNGTVEKFPGDVQAYKK 738
                   799********999965 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   4.9e-06    0.0024       3      65 ..     230     302 ..     229     370 .. 0.70
   2 !    7.1   0.2    0.0086       4.2     246     302 ..     378     428 ..     370     429 .. 0.74
   3 ?   -2.7   0.1       8.1   3.9e+03     130     182 ..     437     492 ..     432     520 .. 0.66
   4 !   15.7   1.2   2.1e-05      0.01       3      19 ..     563     579 ..     562     596 .. 0.87
   5 !   14.8   0.1   3.9e-05     0.019     236     301 ..     651     710 ..     604     712 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 4.9e-06
      AAA_21   3 vliGpNgsGKSnLLdaldllarl.............drdvegltdelsggggirkipslldlydpeipfefeieef 65 
                 +l+G Ng GKS+LL+al  ++r              +    ++t+ l+   + +++++ l + + +i+ ++++   
  KHJ30401.1 230 GLVGQNGIGKSTLLRAL--ARRElaipthisilhveQEIRGDDTPALQAVLDADVWRKHLLGEQVKISKQLADL-E 302
                 69***************..3333666666666666666666666666666666666666666666666666665.5 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0086
      AAA_21 246 alltallralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltTHSplll 302
                 al+ al+  +   +lll+DEp n L+   ++ l++ l +     + +++++H+  +l
  KHJ30401.1 378 ALARALFCEP---DLLLLDEPSNMLDVPSISFLATYLQSY---PSTLLVVSHDRAFL 428
                 5555555555...9*************9999999777443...468******97665 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 8.1
      AAA_21 130 lsvsepndlqfgkaltditsrawsllllldglrke...rigllnifadyfgfakek 182
                 +  se  d+++g+++ ++++++++ ++  +  +++   + ++l++f+d f ++  k
  KHJ30401.1 437 HQHSERLDYYKGANFESFYATKEERRKTAQREYDNqmqQRAHLQAFIDKFRYNAAK 492
                 56667777777777777777777777777666666777555555555555555444 PP

  == domain 4  score: 15.7 bits;  conditional E-value: 2.1e-05
      AAA_21   3 vliGpNgsGKSnLLdal 19 
                 +++GpNg+GK+++L++l
  KHJ30401.1 563 GIVGPNGAGKTTILKLL 579
                 69*************99 PP

  == domain 5  score: 14.8 bits;  conditional E-value: 3.9e-05
      AAA_21 236 elSdGtkrllalltallralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltTHSpll 301
                  lS G+k+  ++  a+l++  +  +l++DEp n+L+ +++  l   l++ +     v++++H+ + 
  KHJ30401.1 651 LLSGGQKS--RVTFACLSLQNP-HILVLDEPSNHLDIEAMDALSSALSSFQG---GVLMVSHDVTM 710
                 44666555..477788888888.9********************99999977...99****99765 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.014       6.7      28      44 ..     230     246 ..     207     251 .. 0.82
   2 !    9.5   0.1    0.0012       0.6     128     205 ..     360     431 ..     287     445 .. 0.81
   3 !    8.1   0.0    0.0034       1.7      27      42 ..     562     577 ..     549     584 .. 0.81
   4 !   14.3   0.0   4.2e-05      0.02     134     205 ..     649     714 ..     603     726 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.014
                 EEEESTTSSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxx RF
       SMC_N  28 aivGpNGSGKsnlldAi 44 
                  +vG+NG GKs ll A+
  KHJ30401.1 230 GLVGQNGIGKSTLLRAL 246
                 589***********997 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0012
                 HCTT-STTCS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 128 esagiskelLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemleka 205
                 e++++  +++SgG +    + L +A   +    l llDe    LD   ++ +a++l++    + ++v+s+++ +l+++
  KHJ30401.1 360 ERQQFATKTFSGGWR----MRLALARALFCEPDLLLLDEPSNMLDVPSISFLATYLQSYP--STLLVVSHDRAFLNEV 431
                 667777778888876....4455555555666799*********************9998..99********999876 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.0034
                 EEEEESTTSSHHHHHH CS
                 xxxxxxxxxxxxxxxx RF
       SMC_N  27 taivGpNGSGKsnlld 42 
                   ivGpNG+GK+ +l 
  KHJ30401.1 562 IGIVGPNGAGKTTILK 577
                 579*********9985 PP

  == domain 4  score: 14.3 bits;  conditional E-value: 4.2e-05
                 TTCS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 134 kelLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemleka 205
                 +elLSgG+k+ v     fA  + +   + +lDe   +LD + + ++++ l + +    ++++s++ +ml+++
  KHJ30401.1 649 MELLSGGQKSRV----TFACLSLQNPHILVLDEPSNHLDIEAMDALSSALSSFQ--GGVLMVSHDVTMLQNV 714
                 459******965....677778888999**********************9988..8999****99999986 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   0.00035      0.17      25      42 ..     229     246 ..     217     255 .. 0.85
   2 !   11.4   0.1   0.00042      0.21      17      39 ..     554     576 ..     548     589 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00035
      AAA_29  25 tlltGpsGsGKSTllDAi 42 
                 + l+G++G GKSTll A+
  KHJ30401.1 229 YGLVGQNGIGKSTLLRAL 246
                 5599***********887 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00042
      AAA_29  17 ieidlkgatlltGpsGsGKSTll 39 
                 ++++l++ + ++Gp+G+GK+T+l
  KHJ30401.1 554 LDVQLDSRIGIVGPNGAGKTTIL 576
                 55565666789***********8 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   0.00018     0.087       2      27 ..     229     255 ..     228     328 .. 0.92
   2 !    9.5   0.2    0.0021         1       1      22 [.     561     582 ..     561     596 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00018
                 EEEEESTTSSHHHHHHHHHTS.TEEES CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge.kaivs 27 
                  ++vG+   GKStL++al ++  ai +
  KHJ30401.1 229 YGLVGQNGIGKSTLLRALARReLAIPT 255
                 589***************998456555 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0021
                 EEEEEESTTSSHHHHHHHHHTS CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge 22 
                 +++ivG   +GK+t+++ l+g+
  KHJ30401.1 561 RIGIVGPNGAGKTTILKLLIGN 582
                 69*****************997 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   0.00013     0.062     100     123 ..     227     250 ..     187     275 .. 0.82
   2 !    8.5   0.0    0.0035       1.7     102     132 ..     562     592 ..     538     612 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.00013
                  SEEEEECSTTSSHHHHHHHHCTT- CS
  RsgA_GTPase 100 ktsvlvGqSGvGKStLinallpel 123
                  +   lvGq G+GKStL+ al+ ++
   KHJ30401.1 227 RRYGLVGQNGIGKSTLLRALARRE 250
                  55679***************9863 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0035
                  EEEECSTTSSHHHHHHHHCTT-----S---- CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpelelktgevse 132
                  + +vG+ G+GK+t+++ l+++l    g +s+
   KHJ30401.1 562 IGIVGPNGAGKTTILKLLIGNLLPTSGLISQ 592
                  4579***************997666666665 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       6.1   2.9e+03      45      76 ..     149     200 ..     110     209 .. 0.66
   2 !   10.6   0.0    0.0013      0.61       3      64 ..     231     295 ..     230     327 .. 0.70
   3 !   10.3   0.0    0.0016      0.79       1      18 [.     562     579 ..     562     628 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 6.1
      AAA_18  45 aldeskrldedkldklldaleenss....................aleegkn 76 
                 a ++sk++ + ++ +++++l+++++                     ++++k+
  KHJ30401.1 149 AAKQSKKVFKTVQYEASRLLNQADNtqsyeeffmavnplqlgslkGQQKCKD 200
                 6688888888888888888888877665555555555555555554555555 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.0013
      AAA_18   3 ltGtpGvGKttlakeLskrl.gfgvnlrdvakenglllevdpe..aldeskrldedkldklldal 64 
                 l G  G GK+tl ++L++r+ ++ ++++ ++ e +++ +++p+  a+ + ++ +++ l + +++ 
  KHJ30401.1 231 LVGQNGIGKSTLLRALARRElAIPTHISILHVEQEIRGDDTPAlqAVLDADVWRKHLLGEQVKIS 295
                 6788999************8777888888888888888888885544455555444444444444 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.0016
      AAA_18   1 IlltGtpGvGKttlakeL 18 
                 I++ G+ G+GKtt+ k L
  KHJ30401.1 562 IGIVGPNGAGKTTILKLL 579
                 89**************99 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0     0.002      0.96      10      29 ..     231     250 ..     227     277 .. 0.85
   2 !   11.0   0.0   0.00082       0.4      10     112 ..     564     690 ..     559     707 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.002
      AAA_22  10 vtGesGtGKTtllrrlleql 29 
                 ++G+ G+GK+tllr l+++ 
  KHJ30401.1 231 LVGQNGIGKSTLLRALARRE 250
                 79**************9986 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00082
      AAA_22  10 vtGesGtGKTtllrrlleqldeeakaee...................erpevv.fvtlpsstsskdllrellralglelkaerlsseellealeqalra 88 
                 ++G+ G+GKTt l+ l  +l   +                        + + v f+  + ++++++ +r+ l a+g  + + +l++ ell+  ++   +
  KHJ30401.1 564 IVGPNGAGKTTILKLLIGNLLPTSGLISqnprlrigyfaqhhidaldLNTSAVgFMAKNYPGKQDEEYRRHLGAFGITGTT-GLQKMELLSGGQKSRVT 661
                 89*************998885444333367888888888877777765555554666666667777788888888877777.77777777666665555 PP

      AAA_22  89 rav.....ielliiDEaqh.lrseealeeL 112
                  a      +++l++DE  + l   ea+  L
  KHJ30401.1 662 FAClslqnPHILVLDEPSNhL-DIEAMDAL 690
                 555666668888888866657.55555555 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       2.2   1.1e+03     139     168 ..     139     168 ..     130     189 .. 0.65
   2 !   10.8   0.0    0.0006      0.29       3      54 ..     227     279 ..     226     306 .. 0.78
   3 !    9.1   0.1     0.002      0.98       4      22 ..     561     579 ..     558     589 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 2.2
      AAA_24 139 pegeakytrlepklgkktanelkeevDlvl 168
                 ++ e++  +++ k++kk+++ +++e+  +l
  KHJ30401.1 139 KKLEKAERKIAAKQSKKVFKTVQYEASRLL 168
                 333334456777778888777777765554 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.0006
      AAA_24   3 lkiliyGpsgiGKTtlakelgpkplfidtekGlksld.adkfpdieswedfld 54 
                 +++ ++G++giGK+tl++ l  + l i t  +  +++  ++++d ++++++ld
  KHJ30401.1 227 RRYGLVGQNGIGKSTLLRALARRELAIPTHISILHVEqEIRGDDTPALQAVLD 279
                 57889***************888888888777666641456666666666665 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.002
      AAA_24   4 kiliyGpsgiGKTtlakel 22 
                 +i i+Gp+g+GKTt++k l
  KHJ30401.1 561 RIGIVGPNGAGKTTILKLL 579
                 899************9977 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   1.1       1.3   6.5e+02     146     164 ..     132     150 ..      34     201 .. 0.52
   2 !   13.2   0.0    0.0002     0.097      21      39 ..     228     246 ..     207     248 .. 0.70
   3 ?   -0.9   0.5         4   1.9e+03     151     195 ..     294     339 ..     258     343 .. 0.66
   4 ?    3.8   1.0      0.14        70     129     189 ..     437     504 ..     409     506 .. 0.59
   5 !   17.5   0.1   9.1e-06    0.0044      23      38 ..     563     578 ..     549     599 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 1.3
      AAA_23 146 felkdkkerleelekelee 164
                 +e k + ++le++e+++  
  KHJ30401.1 132 LESKVDRKKLEKAERKIAA 150
                 1111111122222222211 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 0.0002
      AAA_23  21 ltlItGpNGaGKTTildAi 39 
                  + ++G+NG GK+T+l+A+
  KHJ30401.1 228 RYGLVGQNGIGKSTLLRAL 246
                 46789*************8 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 4
      AAA_23 151 kkerleelekeleeledekkllekl.eqekekekeleeleeeleei 195
                  +++l++le e + + ++    ekl +++++  ++l +++ +l e+
  KHJ30401.1 294 ISKQLADLELECNSIAETSINAEKLnHERESLDQTLGDIQAKLAEM 339
                 3446666666666665555555555346666666777777766665 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.14
      AAA_23 129 kiilnlilflgqerfeefelkdkkerleelekeleeledekkllekl........eqekekekeleele 189
                  + ++++++++  +fe f  ++k+er + +++e++ + +++  l++          +  e + ++++le
  KHJ30401.1 437 HQHSERLDYYKGANFESFY-ATKEERRKTAQREYDNQMQQRAHLQAFidkfrynaAKSSEAQSRIKKLE 504
                 3355677777777764443.6667777777777777777777777774444555533334444444444 PP

  == domain 5  score: 17.5 bits;  conditional E-value: 9.1e-06
      AAA_23  23 lItGpNGaGKTTildA 38 
                  I+GpNGaGKTTil  
  KHJ30401.1 563 GIVGPNGAGKTTILKL 578
                 6************975 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0    0.0022       1.1       6      41 ..     230     265 ..     226     289 .. 0.80
   2 !   10.0   0.0    0.0013      0.65       5      28 ..     562     590 ..     559     631 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0022
      AAA_14   6 vitGaRrvGKTtllkqlikellvkkesilyinldde 41 
                  ++G   +GK+tll+ l++++l+ + +i  + +++e
  KHJ30401.1 230 GLVGQNGIGKSTLLRALARRELAIPTHISILHVEQE 265
                 689999****************66788887777774 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.0013
      AAA_14   5 lvitGaRrvGKTtllkqlikell.....v 28 
                 + i+G+  +GKTt+lk li +ll     +
  KHJ30401.1 562 IGIVGPNGAGKTTILKLLIGNLLptsglI 590
                 5799***************9999665552 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.1   0.00024      0.12      29      47 ..     231     252 ..     224     383 .. 0.64
   2 ?    7.3   0.0     0.012       5.7      29      51 ..     564     586 ..     549     622 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00024
      AAA_16  29 lsGesGvGKsslvrellr...a 47 
                 l+G+ G+GKs+l+r+l+r   a
  KHJ30401.1 231 LVGQNGIGKSTLLRALARrelA 252
                 79**************983322 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.012
      AAA_16  29 lsGesGvGKsslvrellralekd 51 
                 ++G+ G GK+++++ l   l  +
  KHJ30401.1 564 IVGPNGAGKTTILKLLIGNLLPT 586
                 89***********9998777666 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0065       3.1       3      22 ..     231     250 ..     229     286 .. 0.71
   2 !    9.6   0.1    0.0024       1.1       3      22 ..     564     583 ..     562     699 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0065
                 EESSTTSSHHHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavakel 22 
                 l+G  G+GK++l +a+a+  
  KHJ30401.1 231 LVGQNGIGKSTLLRALARRE 250
                 89***************973 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0024
                 EESSTTSSHHHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavakel 22 
                 ++Gp G GKT++ k ++ +l
  KHJ30401.1 564 IVGPNGAGKTTILKLLIGNL 583
                 68*************99986 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0    0.0013      0.65       4      46 ..     231     275 ..     230     348 .. 0.61
   2 !    7.7   0.0    0.0075       3.6       4      23 ..     564     583 ..     562     618 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0013
      AAA_33   4 lvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqqskt 46 
                 lvG +G GKstl++ l++++    +++s   + + ++g+d + ++
  KHJ30401.1 231 LVGQNGIGKSTLLRALARRELaiPTHISILHVEQEIRGDDTPALQ 275
                 69**************98766675555555555555554444443 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0075
      AAA_33   4 lvGlpGsGKstlaerllkkl 23 
                 +vG++G+GK+t ++ l+ +l
  KHJ30401.1 564 IVGPNGAGKTTILKLLIGNL 583
                 69**********99887655 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.091        44      22      40 ..     230     248 ..     222     260 .. 0.86
   2 ?   -1.9   0.0       4.6   2.2e+03      81     115 ..     370     414 ..     292     432 .. 0.63
   3 !   11.5   0.0   0.00038      0.18      23     122 ..     564     704 ..     557     709 .. 0.68

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.091
      AAA_30  22 vltGpAGtGKttalkalre 40 
                  l+G  G GK+t+l+al++
  KHJ30401.1 230 GLVGQNGIGKSTLLRALAR 248
                 589*************964 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 4.6
      AAA_30  81 k.........grarlepgtllivDEag.mvdtkqlaallkaaeka 115
                           +ra + + +ll+ DE + m+d  ++  l++ ++++
  KHJ30401.1 370 SggwrmrlalARALFCEPDLLLLDEPSnMLDVPSISFLATYLQSY 414
                 144445566655555666888888866366777777777776665 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 0.00038
      AAA_30  23 ltGpAGtGKttalkal.reaweaag.......grviglAptgkaAkvLae.elgi.....eastiakllkrlk.......................... 81 
                 ++Gp G+GKtt+lk l  +++ ++g        r+  +A  +  A +L++ ++g+     +++  ++                                
  KHJ30401.1 564 IVGPNGAGKTTILKLLiGNLLPTSGlisqnprLRIGYFAQHHIDALDLNTsAVGFmaknyPGKQDEE-----Yrrhlgafgitgttglqkmellsggqk 657
                 89************99678888888999999888889999999999988522333222222222222.....122223444555555555556667888 PP

      AAA_30  82 .....grarlepgtllivDEagmv.dtkqlaallkaaekagakvilv 122
                      +  +l++ ++l+ DE +   d++ ++al +a+++ +  v++v
  KHJ30401.1 658 srvtfACLSLQNPHILVLDEPSNHlDIEAMDALSSALSSFQGGVLMV 704
                 88888667788889999999775448888888888887766666665 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   4.2       2.1     1e+03     188     276 ..      67     168 ..      32     225 .. 0.55
   2 !    9.4   0.0    0.0016      0.79      28      43 ..     231     246 ..     208     248 .. 0.93
   3 ?   -1.6   0.1       3.6   1.7e+03     230     257 ..     314     344 ..     290     368 .. 0.56
   4 ?    1.8   0.1      0.32   1.5e+02     156     214 ..     448     503 ..     401     544 .. 0.66
   5 !   12.8   0.0   0.00014      0.07      18      43 ..     555     579 ..     548     612 .. 0.87
   6 ?   -0.5   0.0       1.6   7.6e+02     322     340 ..     668     686 ..     661     697 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 2.1
      AAA_15 188 nvlksaiiklllisakRnvsdedsekkssllgklkekileealqekl..................eeelteklkei..qeklkeidkklaeelkkilkk 266
                  ++k++i+k+l   + R +++ + +k+ss+  +l++ i    +q+ l                  +    +kl++    +kl++++ k+a++ +k+++k
  KHJ30401.1  67 AIIKQLIQKWLETLDARASDERR-KKNSSTVKRLDQAIQV-GSQT-LmsstigfavgdvdlesagT----RKLESKvdRKKLEKAERKIAAKQSKKVFK 158
                 44555555555555555444333.3334444444444433.2233.23666677777766644331....22222211344555555555555555555 PP

      AAA_15 267 kidkikkfny 276
                  ++   +   
  KHJ30401.1 159 TVQYEASRLL 168
                 5444333222 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0016
      AAA_15  28 liGkNnsGKSsileal 43 
                 l+G N++GKS++l+al
  KHJ30401.1 231 LVGQNGIGKSTLLRAL 246
                 8**************9 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 3.6
      AAA_15 230 lqekl...eeelteklkeiqeklkeidkkla 257
                 ++ekl   +e+l + l +iq kl e+d++ a
  KHJ30401.1 314 NAEKLnheRESLDQTLGDIQAKLAEMDSDRA 344
                 2222233345555555555555555555444 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.32
      AAA_15 156 ekekeelkidkedlkklikkleeslkkeeelknvlksaiiklllisakRnvsdedsekk 214
                   + e++  +ke+ +k+ ++ + +  ++      l+++i+k++++ ak +  +++ +k 
  KHJ30401.1 448 GANFESFYATKEERRKTAQREYDNQMQQR---AHLQAFIDKFRYNAAKSSEAQSRIKKL 503
                 34445555556666666655555555555...667777777777666666555554443 PP

  == domain 5  score: 12.8 bits;  conditional E-value: 0.00014
      AAA_15  18 eidlseeltvliGkNnsGKSsileal 43 
                 +++l++    ++G+N++GK++il++l
  KHJ30401.1 555 DVQLDS-RIGIVGPNGAGKTTILKLL 579
                 455555.788**************98 PP

  == domain 6  score: -0.5 bits;  conditional E-value: 1.6
      AAA_15 322 eknvilliEEPEahLHpqa 340
                 ++++il+++EP +hL ++a
  KHJ30401.1 668 QNPHILVLDEPSNHLDIEA 686
                 689***********96555 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00072      0.35       5      22 ..     231     248 ..     227     252 .. 0.89
   2 ?    5.4   0.2     0.031        15       3      21 ..     562     580 ..     560     592 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00072
                 EEC-TTTCHHHHHHHHHH CS
       NACHT   5 lqGeaGsGKTtLlqklal 22 
                 l G++G+GK+tLl+ la+
  KHJ30401.1 231 LVGQNGIGKSTLLRALAR 248
                 79************9986 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.031
                 EEEEC-TTTCHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqkla 21 
                 + + G++G GKTt l+ l+
  KHJ30401.1 562 IGIVGPNGAGKTTILKLLI 580
                 5689**********99776 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00073      0.35       4      39 ..     231     266 ..     228     303 .. 0.64
   2 ?    6.9   0.2     0.014       6.7       1      19 [.     561     579 ..     561     586 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00073
      AAA_28   4 itGgestGKTtlleaLaargypvvpEaareileekl 39 
                 ++G  + GK+tll+aLa+r+  + + +    +e++ 
  KHJ30401.1 231 LVGQNGIGKSTLLRALARRELAIPTHISILHVEQEI 266
                 78999*************976655555555554444 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.014
      AAA_28   1 kivitGgestGKTtlleaL 19 
                 +i i+G+ ++GKTt+l+ L
  KHJ30401.1 561 RIGIVGPNGAGKTTILKLL 579
                 6789***********9987 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0     0.013       6.1       3      21 ..     231     249 ..     230     266 .. 0.85
   2 !    8.6   0.0    0.0049       2.4       3      30 ..     564     591 ..     562     613 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.013
  RNA_helicase   3 lyGpsgeGKStlakeLaka 21 
                   l+G++g+GKStl + La++
    KHJ30401.1 231 LVGQNGIGKSTLLRALARR 249
                   68*************9986 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0049
  RNA_helicase   3 lyGpsgeGKStlakeLakallkklklkk 30 
                   ++Gp+g GK+t+ k L+ +ll +++l++
    KHJ30401.1 564 IVGPNGAGKTTILKLLIGNLLPTSGLIS 591
                   89***************99997765544 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0      0.12        58       4      20 ..     231     247 ..     228     251 .. 0.84
   2 !    9.3   0.0     0.002      0.99       2      37 ..     562     593 ..     561     632 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.12
                 EE--TTSSHHHHHHHHH CS
    NTPase_1   4 iTGppGvGKtTlvkkvl 20 
                 + G+ G+GK+Tl++ ++
  KHJ30401.1 231 LVGQNGIGKSTLLRALA 247
                 789*********98776 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.002
                 EEEE--TTSSHHHHHHHHHHHH...GGGEEEEEEEE CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkssgvkvgGfytee 37 
                 + i Gp G GKtT++k ++ +l    ++ +G++ ++
  KHJ30401.1 562 IGIVGPNGAGKTTILKLLIGNL----LPTSGLISQN 593
                 7899*************99998....6777777665 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0     0.011       5.1      30      55 ..     227     252 ..     214     265 .. 0.77
   2 !    7.0   0.0    0.0052       2.5       8      53 ..     538     583 ..     533     589 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.011
                 EEEEEEE-TTSSHHHHHHHHHHHHHC CS
        MeaB  30 qvvGltGvPGaGkstlvealglelrr 55 
                 ++ Gl G  G Gkstl+ al+ +  +
  KHJ30401.1 227 RRYGLVGQNGIGKSTLLRALARRELA 252
                 688***************99876555 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0052
                 HH--SHHHHHHHHHHGGG-S-SEEEEEEE-TTSSHHHHHHHHHHHH CS
        MeaB   8 veserpeakellerllakaGraqvvGltGvPGaGkstlvealglel 53 
                 v   +++ k ll+++  +     ++G+ G  GaGk t+++ l+ +l
  KHJ30401.1 538 VSFGYSRDKLLLKNVDLDVQLDSRIGIVGPNGAGKTTILKLLIGNL 583
                 55566677778888888888899****************9998776 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0     0.019       9.3       4      24 ..     231     251 ..     228     273 .. 0.85
   2 ?    6.2   0.1     0.023        11       2      21 ..     562     581 ..     561     588 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.019
                 EESSTTSSHHHHHHCHCT-CC CS
         Roc   4 lvGdsgvGKtsllkrfvedkf 24 
                 lvG++g+GK++ll+ + +++ 
  KHJ30401.1 231 LVGQNGIGKSTLLRALARREL 251
                 8*************9987765 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.023
                 EEEESSTTSSHHHHHHCHCT CS
         Roc   2 vvlvGdsgvGKtsllkrfve 21 
                 + +vG +g+GKt++lk ++ 
  KHJ30401.1 562 IGIVGPNGAGKTTILKLLIG 581
                 779************98775 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   1.8     0.048        23       3      24 ..     231     252 ..     230     540 .. 0.79
   2 ?    6.3   0.0     0.019         9       1      27 [.     562     587 ..     562     609 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.048
                 EEEBTTTTHHHHHHHHHTS--S CS
   Dynamin_N   3 vvGsqSsGKSSvlnaLlgedil 24 
                 +vG+   GKS++l aL ++++ 
  KHJ30401.1 231 LVGQNGIGKSTLLRALARRELA 252
                 6999999********9999954 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.019
                 EEEEEBTTTTHHHHHHHHHTS--S--- CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprg 27 
                 i +vG   +GK+++l  L+g   lp++
  KHJ30401.1 562 IGIVGPNGAGKTTILKLLIGNL-LPTS 587
                 789*****************87.7776 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.064        31       4      23 ..     230     249 ..     228     325 .. 0.87
   2 ?    8.0   0.6     0.004       1.9       3      21 ..     562     580 ..     560     590 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.064
                 EEEESTTCCHHHHHHHHHCT CS
        cobW   4 vltGflGsGKTtLlnhllen 23 
                 +l+G  G GK+tLl++l ++
  KHJ30401.1 230 GLVGQNGIGKSTLLRALARR 249
                 689999*********99854 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.004
                 EEEEESTTCCHHHHHHHHH CS
        cobW   3 tvltGflGsGKTtLlnhll 21 
                 ++++G+ G+GKTt+l+ l+
  KHJ30401.1 562 IGIVGPNGAGKTTILKLLI 580
                 679************9887 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0     0.016       7.5       4      22 ..     231     249 ..     230     263 .. 0.91
   2 ?    3.4   0.1      0.14        68       4      20 ..     564     580 ..     562     595 .. 0.79
   3 ?   -0.2   0.0       1.9   9.4e+02      64      89 ..     656     694 ..     621     697 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.016
                 EE--SSSSHHHHHHHGGGG CS
       AAA_5   4 LvGppGtgKselaerlaaa 22 
                 LvG+ G+gKs+l + la++
  KHJ30401.1 231 LVGQNGIGKSTLLRALARR 249
                 8**************9985 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.14
                 EE--SSSSHHHHHHHGG CS
       AAA_5   4 LvGppGtgKselaerla 20 
                 +vGp G gK+++ + l 
  KHJ30401.1 564 IVGPNGAGKTTILKLLI 580
                 69**********99886 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 1.9
                 -............G-SEEEEESGGG--.HHHHHHHHHHH CS
       AAA_5  64 r............egeilvlDEverae.sevlnsLlsll 89 
                 +            +++ilvlDE  +    e++++L s l
  KHJ30401.1 656 QksrvtfaclslqNPHILVLDEPSNHLdIEAMDALSSAL 694
                 33333333444449*******954333266666666665 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.35   1.7e+02       3      21 ..     230     248 ..     229     271 .. 0.83
   2 ?    9.4   0.1     0.002      0.95       2      23 ..     562     583 ..     561     592 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.35
        MobB   3 givgksgsGKTtLleklip 21 
                 g+vg++g GK tLl  l +
  KHJ30401.1 230 GLVGQNGIGKSTLLRALAR 248
                 689***********98865 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.002
        MobB   2 lgivgksgsGKTtLleklipel 23 
                 +givg +g+GKTt+l+ li  l
  KHJ30401.1 562 IGIVGPNGAGKTTILKLLIGNL 583
                 79*****************877 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.022        11      16      49 ..     218     249 ..     215     267 .. 0.70
   2 ?    6.5   0.0     0.011       5.5      31      44 ..     564     577 ..     542     585 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.022
      AAA_27  16 drsldfsaeeadlhliyGpNEAGKstalrAisdl 49 
                 d++l++    ++   ++G N  GKst+lrA+ + 
  KHJ30401.1 218 DTNLSLA-YGRRYG-LVGQNGIGKSTLLRALARR 249
                 5555555.334444.47*************9865 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.011
      AAA_27  31 iyGpNEAGKstalr 44 
                 i+GpN AGK+t+l+
  KHJ30401.1 564 IVGPNGAGKTTILK 577
                 89*********997 PP

>> Adeno_IVa2  Adenovirus IVa2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.018       8.8      71     121 ..     215     260 ..     145     267 .. 0.59
   2 ?    5.8   0.1      0.01         5      80     111 ..     553     583 ..     534     598 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.018
  Adeno_IVa2  71 llrddGelsslnyglqPviGviyGPtGsGksqllrnlissklisPiPetvi 121
                 +l d     sl yg++   G+  G  G Gks llr+l   +l  P+   ++
  KHJ30401.1 215 ILTD--TNLSLAYGRR--YGL-VGQNGIGKSTLLRALARRELAIPTHISIL 260
                 4444..3335666665..344.5899***********99999988866655 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.01
  Adeno_IVa2  80 slnyglqPviGviyGPtGsGksqllrnlissk 111
                  l+++l+  iG++ GP G+Gk+ +l+ li + 
  KHJ30401.1 553 DLDVQLDSRIGIV-GPNGAGKTTILKLLIGNL 583
                 5788999999975.***********9999764 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.071        34       6      24 ..     231     249 ..     228     260 .. 0.89
   2 ?    6.1   0.1     0.015       7.4       4      18 ..     562     576 ..     559     585 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.071
                 EEESTTSSHHHHHHHHHHH CS
       SRP54   6 lvGlqGaGKTttlaKLaal 24 
                 lvG +G+GK t l  La++
  KHJ30401.1 231 LVGQNGIGKSTLLRALARR 249
                 8************999975 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.015
                 EEEEESTTSSHHHHH CS
       SRP54   4 illvGlqGaGKTttl 18 
                 i +vG++GaGKTt l
  KHJ30401.1 562 IGIVGPNGAGKTTIL 576
                 568*********986 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.031        15      24      42 ..     230     248 ..     226     268 .. 0.87
   2 ?    6.0   0.0     0.012       5.9      22      38 ..     561     577 ..     545     583 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.031
                 EEEESTTSSHHHHHHHHCC CS
      NB-ARC  24 alvGmgGvGKttlakqiln 42 
                 +lvG  G+GK+tl++   +
  KHJ30401.1 230 GLVGQNGIGKSTLLRALAR 248
                 699**********987665 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.012
                 EEEEEESTTSSHHHHHH CS
      NB-ARC  22 vvalvGmgGvGKttlak 38 
                  +++vG  G GKtt++k
  KHJ30401.1 561 RIGIVGPNGAGKTTILK 577
                 499************87 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.054        26      28      55 ..     221     248 ..     213     282 .. 0.81
   2 ?    6.0   0.0     0.016       7.9      31      57 ..     557     583 ..     544     593 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.054
       AAA_7  28 lllknkkpvllvGptGtGKtviikdllk 55 
                 l l+ ++   lvG+ G GK+++++ l +
  KHJ30401.1 221 LSLAYGRRYGLVGQNGIGKSTLLRALAR 248
                 55677788889***********998544 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.016
       AAA_7  31 knkkpvllvGptGtGKtviikdllkkl 57 
                 + +  + +vGp G GKt+i+k l+ +l
  KHJ30401.1 557 QLDSRIGIVGPNGAGKTTILKLLIGNL 583
                 55667789************9876655 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.051        25      21      42 ..     228     249 ..     214     298 .. 0.86
   2 ?    5.8   0.0     0.028        13      20      43 ..     560     583 ..     543     613 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.051
                 EEEEEESTTSSHHHHHHHHHHH CS
        TsaE  21 vilLeGdLGaGKTtlvrglaka 42 
                    L G+ G GK+tl r+la+ 
  KHJ30401.1 228 RYGLVGQNGIGKSTLLRALARR 249
                 56799**************985 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.028
                 EEEEEEESTTSSHHHHHHHHHHHT CS
        TsaE  20 dvilLeGdLGaGKTtlvrglakal 43 
                 + i + G+ GaGKTt+ + l+ +l
  KHJ30401.1 560 SRIGIVGPNGAGKTTILKLLIGNL 583
                 4578899**********9998766 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.2       6.9   3.3e+03     143     175 ..     138     169 ..     129     176 .. 0.60
   2 ?    5.1   0.0     0.025        12      21      39 ..     231     249 ..     216     265 .. 0.84
   3 ?    4.6   0.0     0.034        17      21      41 ..     564     584 ..     560     594 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 6.9
  Zeta_toxin 143 RyeeevaegRlvpkeehdeafeglresvealee 175
                 R + e ae R++  ++ +++f+ ++ ++ +l +
  KHJ30401.1 138 RKKLEKAE-RKIAAKQSKKVFKTVQYEASRLLN 169
                 44444333.777766666666666666555544 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.025
  Zeta_toxin  21 lgGqpGAGKselaellkde 39 
                 l+Gq G GKs+l+++l+++
  KHJ30401.1 231 LVGQNGIGKSTLLRALARR 249
                 89***********998764 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.034
  Zeta_toxin  21 lgGqpGAGKselaellkdele 41 
                 ++G  GAGK+++++ll  +l 
  KHJ30401.1 564 IVGPNGAGKTTILKLLIGNLL 584
                 68999*********9987765 PP

>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0    0.0084       4.1       6      38 ..     218     250 ..     212     365 .. 0.89
   2 ?    2.4   0.0      0.21     1e+02      16      35 ..     561     580 ..     556     586 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0084
                  HHHS-EBTT-EEEEEESTTSSHHHHHHHHHHHS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab   6 DalfpivqGqrtlipgafgvGktvisqslskqs 38 
                  D+ ++++ G r +++g++g+Gk++++++l++  
   KHJ30401.1 218 DTNLSLAYGRRYGLVGQNGIGKSTLLRALARRE 250
                  78889999********************99874 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.21
                  EEEEEESTTSSHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  16 rtlipgafgvGktvisqsls 35 
                  r++i+g +g Gkt+i++ l+
   KHJ30401.1 561 RIGIVGPNGAGKTTILKLLI 580
                  899************98776 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.1       2.2   1.1e+03      47      74 ..     130     157 ..     120     186 .. 0.73
   2 ?    3.7   0.0      0.16        79       1      18 [.     232     249 ..     232     269 .. 0.79
   3 ?    4.3   0.1      0.11        51       1      15 [.     565     579 ..     565     585 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 2.2
                 CTSHHHHHHHHHHHHHHHHHHHHHSSEE CS
      AAA_17  47 rklpleekkelqkeaaekiaeeakkkgv 74 
                 rkl+ +++++ +++a++kia +++kk +
  KHJ30401.1 130 RKLESKVDRKKLEKAERKIAAKQSKKVF 157
                 6778888888889999999988777765 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.16
                 EE-TTSSHHHHHHHHHHH CS
      AAA_17   1 lGgPGsGKgtqceklvek 18 
                 +G  G GK+t+++ l+++
  KHJ30401.1 232 VGQNGIGKSTLLRALARR 249
                 6999*********99963 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.11
                 EE-TTSSHHHHHHHH CS
      AAA_17   1 lGgPGsGKgtqcekl 15 
                 +G+ G+GK+t+++ l
  KHJ30401.1 565 VGPNGAGKTTILKLL 579
                 79*********9766 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.3       1.4     7e+02      59     112 ..     130     183 ..      81     187 .. 0.64
   2 ?    2.6   0.0      0.22   1.1e+02      27      45 ..     233     251 ..     227     334 .. 0.87
   3 ?   -1.5   0.3       4.1     2e+03      63     121 ..     449     508 ..     421     520 .. 0.53
   4 ?    5.3   0.0     0.032        16      25      45 ..     564     584 ..     554     590 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 1.4
    ATPase_2  59 eesiskldefieeeeekkklekalgiavpkaeleeilk.eksklvfkaielllek 112
                 ++ +sk+d++  e+ e+k ++k+ ++++++++  e +   ++++ +++ e+++++
  KHJ30401.1 130 RKLESKVDRKKLEKAERKIAAKQSKKVFKTVQY-EASRlLNQADNTQSYEEFFMA 183
                 334444444422555555444444444444444.333345555555555655555 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.22
    ATPase_2  27 GpegsGKtaLlkeiienle 45 
                 G  g+GK++Ll+ ++ + +
  KHJ30401.1 233 GQNGIGKSTLLRALARREL 251
                 999*********9988765 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 4.1
    ATPase_2  63 skldefieeeeekkklekal.giavpkaeleeilkeksklvfkaielllekikkkgkkii 121
                 +++++f +++ee++k ++    +++++ +  + + +k ++  ++ +++   ikk  k +i
  KHJ30401.1 449 ANFESFYATKEERRKTAQREyDNQMQQRAHLQAFIDKFRYNAAKSSEAQSRIKKLEKMPI 508
                 344444444444444333332333333333333334444445555566666666666665 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.032
    ATPase_2  25 iYGpegsGKtaLlkeiienle 45 
                 i Gp g GKt++lk +i nl+
  KHJ30401.1 564 IVGPNGAGKTTILKLLIGNLL 584
                 88************9999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (753 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1222  (0.0681577); expected 358.6 (0.02)
Passed bias filter:                      609  (0.0339673); expected 358.6 (0.02)
Passed Vit filter:                       115  (0.00641419); expected 17.9 (0.001)
Passed Fwd filter:                        41  (0.0022868); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              37  [number of targets reported over threshold]
# CPU time: 0.84u 0.28s 00:00:01.12 Elapsed: 00:00:00.44
# Mc/sec: 5186.35
//
Query:       KHJ30402.1  [L=420]
Description: hypothetical protein EV44_g3217 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-36  125.5   0.0      3e-36  125.0   0.0    1.2  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
       0.18   11.9   0.0       0.33   11.0   0.0    1.4  1  DUF5038   Domain of unknown function (DUF5038)


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.0   0.0   3.4e-40     3e-36      19     221 ..       2     235 ..       1     236 [. 0.92

  Alignments for each domain:
  == domain 1  score: 125.0 bits;  conditional E-value: 3.4e-40
                 THHHHCTB--...........-------HHHH.................HCCHTS-.-EEEEEEBCCGCCCSBB-GGGGGGG-EEET............ CS
       RVT_1  19 ykalnkliakrLkdvl..ekllsenqpgfrpgrstldav....edllkalkkkkka.klllklDlkkaFdsvpleellrkltafkvptklinliksfls 110
                 +k+l+kl+a+r+++++   +ll+e+q+g rp+rst+ av    e+++ +  k k++   ll+lD++ a d+v++e+l++ + + ++p+++ + + sfl+
  KHJ30402.1   2 GKLLEKLVANRISKAAeeFNLLPEEQMGARPKRSTISAVelltEQIHTIWGKDKRQvASLLSLDISRALDNVSHERLIHNMRQNGIPKWISQFVVSFLE 100
                 699*************999********************99986666665444444499**************************************** PP

                 ..............TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHH......HHHHHHHHHHHHHHTT--BEGGG CS
       RVT_1 111 trsfsvrv.ngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskee......lqelleaveewlkesglkinpeK 202
                  r++sv + + +  +++++++g+pqGs lSP+lf +f++ ll +l++r  +   + ++DD  il+ s++       l+e  e++e+w+k +g+k++peK
  KHJ30402.1 101 VRTTSVVLgTFKG-EQIPTSTGIPQGSSLSPILFLFFVSTLLPMLQSR--STAAVGFVDDKNILTWSNTTeensrkLEEQHEICERWAKTHGIKFAPEK 196
                 ********55555.*********************************8..9*********9999988777789************************** PP

                 -EEE.........................ESSEEETTEE CS
       RVT_1 203 tklvlft...................v.kseevkyLGvt 221
                  +l++ft                      ++++++LG+ 
  KHJ30402.1 197 YQLMHFTrarkkrhnleatvkikgqlTkPQSSLRVLGIY 235
                 ********9999999999999988653799999999985 PP

>> DUF5038  Domain of unknown function (DUF5038)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   3.7e-05      0.33      34     109 ..      89     169 ..      66     173 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3.7e-05
     DUF5038  34 slkeqfpvyltrigrtdvt....saeylpdetgypdtttve.lhfllsddstlpvfydtmtgafsfgedrtvlgtsgktye 109
                     qf v +  +  t v       e +p  tg p+ +++  + fl+   + lp++    t a+ f +d+ +l  s  t e
  KHJ30402.1  89 KWISQFVVSFLEVRTTSVVlgtfKGEQIPTSTGIPQGSSLSpILFLFFVSTLLPMLQSRSTAAVGFVDDKNILTWSNTTEE 169
                 5556777777777777765222246899*******998876377888888889********************99998877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       686  (0.038262); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 3271.99
//
Query:       KHJ30403.1  [L=591]
Description: putative 2-methylcitrate dehydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   1.7e-148  494.8   0.0   2.1e-148  494.5   0.0    1.0  1  MmgE_PrpD  MmgE/PrpD family


Domain annotation for each model (and alignments):
>> MmgE_PrpD  MmgE/PrpD family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  494.5   0.0  1.2e-152  2.1e-148       3     433 ..     119     570 ..     117     576 .. 0.95

  Alignments for each domain:
  == domain 1  score: 494.5 bits;  conditional E-value: 1.2e-152
                 HHHHHHHH-----H..HHHHHHHHHHHHHHHHHHHHTT-HHHHTT-S.SSTT-B-TT-EE-TTSS-EE-HHHHHHHHHHHHHCTS-S-BEESSSEE-GG CS
   MmgE_PrpD   3 qlaefvaelryddlpeevverakrlilDtlGvalaglrepavkkale.avkgtggpggatvigtgerlspvkAAfvnGaaihalDfdDthlaaelhhps 100
                 ++a++v+++ +++    ++++a+++++Dt+G++l+gl++++++k+l+ +v+gt +p+g++v+gt ++l+pv++Af++Ga+i++lD++D++laae++hps
  KHJ30403.1 119 DIAKYVHNTPIQSD--LAFDTARYVLIDTIGCGLEGLKFDECRKLLGpIVPGTIVPNGTKVFGTTYQLDPVNGAFNIGAMIRWLDYNDCWLAAEWGHPS 215
                 79**********99..*********************************************************************************** PP

                 GGHHHHHHHHHHHHHH.............B.HHHHHHHHHHHHHHHHHCCC--SCCCT.B-THHHHHHHHHHHHHHHTT--HHHHHHHHHHHHCT-B-B CS
   MmgE_PrpD 101 dvlpaalAvAealgas.............g.kdlLtAivvGyEvqgrlglalsfnhygfhdtvtlgtfgaaaaaakLlgLdaeqianAlgiaatqaagl 185
                 d+l+a+lAvA++++++             + +d+L+Ai++++E+qg+l+l +s+n++g +d+v+l+++++aa+++ +lgL+++q+a+A+++a++++++l
  KHJ30403.1 216 DNLGAILAVADWISRTnraggnlangkivKvRDVLEAIIKAHEIQGCLALLNSYNKVG-LDHVVLVKVASAAVISNMLGLSEKQTADAISHAWVDGQSL 313
                 *****************************66***************************.**************************************** PP

                 SGGGSTTT--CHH.CHHHHHHHHHHHHHHHHHTT---.TTTTT-TTTSHHHHHSTT-----S.S-SS...SHHHHC-B---.SSS-CCCHHHHHHHHHH CS
   MmgE_PrpD 186 rqyrhagtkskkl.waaGdAarnGveaallAkrGftG.psdilegewGflavlsggkdlelevkplgegesweienvlfKp.ypaerhthaaidaalkl 281
                 r+yrh++++++++ waaGdA++++v+++l + rG+ G p+ + +  wGf++vl++gk++e++ +++g   s+++en+lfK  ypae+h+++ai+a  k+
  KHJ30403.1 314 RTYRHSPNTMSRKsWAAGDACQRAVNLVLKVLRGEPGvPTVLSAPVWGFYDVLFKGKKFEFQ-RTYG---SYVMENILFKVsYPAEFHSQTAIEASKKI 408
                 *************************************9999*********************.****...***************************99 PP

                 HHHHCCT...CCCEEEEEEEE-HHHHHHC---S.---SHHHHCT-CCHHHHHHHHCS---CCCCSCCC..CTSCHHCCHHCCEEEEE-HHHHHHH..TT CS
   MmgE_PrpD 282 raelklk...pddIesieirtseaalriigkkg.ppenradadhSlqyvvAvalldgrvtledfeder..ladpevqaLrekvevvedpeltady..pe 372
                 +  l+++   ++dI++i++rt+ea++rii+k+  p +n ad+dh++qy++Av+l++gr++++d++d    +++p v +Lr+k+++vedp++t+dy  ++
  KHJ30403.1 409 HMLLAEQgksAADIQEIVCRTHEACVRIIDKQFkPMDNFADRDHCIQYMCAVMLVYGRLEANDYTDGGeaATSPLVESLRRKIKCVEDPQFTKDYhdEK 507
                 9888887888**********************9999*****************************8655599***********************6433 PP

                 T---.....EEEEETTS-B---EEESS-TTS.GGHHHHHHHHHHHHHHHHHCCS-HHHHHHHHHHHH CS
   MmgE_PrpD 373 krsi.....vvvvlkdggrtleerveypkGh.prnplsreeleeKfrrlaegvlseeeaereeilee 433
                          ++v+l+dg++++e+ v++p+Gh  r+++ ++e+++K++r+++++++ee+ +  e l  
  KHJ30403.1 508 L--RtipnaLTVTLNDGSKLEEVVVHAPLGHkLRREEAKPEIIAKYKRHLASHYNEERVQ--ELLSL 570
                 3..33699***********************************************55555..44443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 4476.68
//
Query:       KHJ30404.1  [L=331]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2630.79
//
Query:       KHJ30405.1  [L=415]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.023   14.7   0.7      0.036   14.0   0.7    1.3  1  Med19     Mediator of RNA pol II transcription subunit 19


Domain annotation for each model (and alignments):
>> Med19  Mediator of RNA pol II transcription subunit 19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.7     2e-06     0.036      47     143 ..     157     258 ..     131     273 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2e-06
       Med19  47 LpdlpGvidlkgtk.ens.sLrsliekPPiggkellpltssalaGfrLhaGPlpeqyrllkkqePkkknkekhkkskvkd....akseetlsdseteeg 139
                 +pd+p  i +++    ns s   l  kPP++   l +lt ++  G    + Plp   + +++       ++ hkks++ +    ++ +   ++ +t  g
  KHJ30405.1 157 IPDVPKFIPTETILkSNSaSKVNLPRKPPVVATPLRNLTEKTKHGHIQASDPLPSTTKNIENC-WVSVTRNGHKKSRTIKksvlQTTKAKKQNTQTSTG 254
                 57777777766654255514456789**********************************887.55556778888877553333333333344444444 PP

       Med19 140 fekk 143
                  +k+
  KHJ30405.1 255 SDKR 258
                 4544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       804  (0.0448435); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 3180.81
//
Query:       KHJ30406.1  [L=104]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.031   14.3   0.1      0.046   13.8   0.1    1.3  1  ArfGap    Putative GTPase activating protein for Arf
       0.22   11.8   4.2        0.3   11.4   4.2    1.1  1  DUF3807   Protein of unknown function (DUF3807)


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   5.1e-06     0.046      36      92 ..      13      71 ..       6      99 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 5.1e-06
                -HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG...- CS
      ArfGap 36 CieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekr...s 92
                C +C g Hrs  ++    r ++  k ++e+l+++++ g+++ ++i  ak  +e+     s
  KHJ30406.1 13 CKNCGGPHRSD-SRKCLARPTRAGKPTKEQLKIFRQAGDREYQAIVRAKIAEERAAtieS 71
                **********8.677789******************************997766653330 PP

>> DUF3807  Protein of unknown function (DUF3807)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   4.2   3.3e-05       0.3      53     108 ..      38      95 ..      37     103 .. 0.54

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.3e-05
     DUF3807  53 TDeQIaiFRHS...EieallRereleeeesekekkeeeeeeedkeaadkessqeseeqe 108
                 T eQ +iFR     E +a+ R++  ee + + e++ +  +++++e +++e ++++++ e
  KHJ30406.1  38 TKEQLKIFRQAgdrEYQAIVRAKIAEERAATIESEMDIVTNSQSENTATE-NSQASSVE 95 
                 89*******86666*********977777444333333333333332221.22222111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1633  (0.0910815); expected 358.6 (0.02)
Passed bias filter:                      650  (0.0362541); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 770.80
//
Query:       KHJ30407.1  [L=147]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      228  (0.0127168); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1151.00
//
Query:       KHJ30408.1  [L=350]
Description: hypothetical protein EV44_g3902 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2763.85
//
Query:       KHJ30409.1  [L=530]
Description: putative rhomboid family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-31  107.5  11.5    5.9e-31  107.5  11.5    1.5  2  Rhomboid  Rhomboid family


Domain annotation for each model (and alignments):
>> Rhomboid  Rhomboid family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.5  11.5   3.3e-35   5.9e-31       2     148 ..     276     418 ..     275     420 .. 0.97
   2 ?   -3.6   0.2      0.55   9.9e+03     102     114 ..     480     492 ..     465     504 .. 0.52

  Alignments for each domain:
  == domain 1  score: 107.5 bits;  conditional E-value: 3.3e-35
                 GGCC-TTHHHHGGG--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-S...-EESSHHHHHHHHHHHHHHHHCCCCGS--- CS
    Rhomboid   2 lkrgelwrlltsmflHagwlHllfNmlallvfGsplerrlGslrflllyllsglagsllsllfsaesesplvGaSGaifgllgallvlvprnrkllrkl 100
                 +++ +++r++  +flHag++H++fNml ++ +G+++e  +Gs r++l+y++sg++g +l   f a +   + GaSGa+fg+l++ l+  + ++ +  ++
  KHJ30409.1 276 NQPDQWFRFIIPIFLHAGLIHIGFNMLLQMTLGKEMEFSIGSIRYFLVYMSSGIFGFVLGGNFAASG-IASTGASGALFGILALNLLDLFYTWGERNSA 373
                 6899*************************************************************97.79***************************** PP

                 -HC...CCCCCCCCCCHHHCTSSSTTTHHHHHHHHHHHHHHHHHHCCH CS
    Rhomboid 101 iiallllllfillnlvlgllpraggvsnlAHlgGllaGlllgllllrr 148
                 + + +++++ i++++vlgllp+    +n+ H+gG+ +Gl+lg+++l++
  KHJ30409.1 374 FKDFTYIMFDIVISFVLGLLPGL---DNFSHIGGFFMGLALGICILHS 418
                 *********************97...****************999876 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.55
                 HC...CCCCCCCC CS
    Rhomboid 102 iallllllfilln 114
                 +  ++++++ill+
  KHJ30409.1 480 LVSVFIVFIILLK 492
                 2233444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3614.93
//
Query:       KHJ30410.1  [L=149]
Description: putative 40s ribosomal protein s12 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-27   95.0   0.7    2.2e-27   94.6   0.7    1.2  1  Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 famil
  ------ inclusion threshold ------
      0.067   13.1   0.0       0.13   12.2   0.0    1.5  1  PELOTA_1        PELOTA RNA binding domain


Domain annotation for each model (and alignments):
>> Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.6   0.7   2.5e-31   2.2e-27       1      94 [.      33     127 ..      33     128 .. 0.98

  Alignments for each domain:
  == domain 1  score: 94.6 bits;  conditional E-value: 2.5e-31
                     HHHHHHHHHHHHHTEEEESHHHHHHHHHTTTESEEEEETTSSSGGHHHHHHHHHHHTTEEEEEESCHHHHHHHTTSSSE.CSEEEEEESTTTHHH CS
  Ribosomal_L7Ae   1 daieevlkkakkagklvlGlkevtkalergeaklvilAedvepeekkkllealckekevpyvkvkskkeLGelvgkkrp.vsalaikdegdskdl 94 
                     da+++vl++a+ +++l++Gl+e+ kal+r++a++++l e +e+e +kkl+ alc e+++p++kv++ k+LGe++g+++  ++++a+k++++s+++
      KHJ30410.1  33 DALKGVLRLALIHDGLARGLREASKALDRRQAHMCVLNETCEEESYKKLVVALCSEHKIPLIKVPDGKQLGEWAGLCVLdREGNARKVVNCSCVV 127
                     58999***************************************************************************************987 PP

>> PELOTA_1  PELOTA RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.4e-05      0.13      25      70 ..      51      98 ..      36     102 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.4e-05
    PELOTA_1 25 gigEaTRvlLRRvPekvlvrd..eeepdlahlllLakekgvpveevpd 70
                g  Ea ++l RR+ +  ++++  eee   +++++L++e+++p+ +vpd
  KHJ30410.1 51 GLREASKALDRRQAHMCVLNEtcEEESYKKLVVALCSEHKIPLIKVPD 98
                6679**********99988884333455678899********999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1152.15
//
Query:       KHJ30411.1  [L=289]
Description: putative 5-amino-6-(5-phosphoribosylamino)uracil reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-28   99.2   0.0    3.1e-28   99.0   0.0    1.1  1  RibD_C    RibD C-terminal domain


Domain annotation for each model (and alignments):
>> RibD_C  RibD C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.0   0.0   1.8e-32   3.1e-28       1     199 [.      52     284 ..      52     285 .. 0.87

  Alignments for each domain:
  == domain 1  score: 99.0 bits;  conditional E-value: 1.8e-32
                 -EEEEEEEEETTSBSSCTTSSGCTSS-HHHHHHHHHHHHTSSEEEEEHHHHHHHT--SS--SSCHSCHHHTT.GSS-EEEEEETTS-S-TTSH...... CS
      RibD_C   1 pyvilklavSlDGklaaaggeskwitgeearadvhelraeadailvGrgtvladnpsltvrwvkkreaeadaearqpvrvVvdstlrvpldak...... 93 
                 p+v++++a+Sl   +a a ++ + i+g + +a++h+lra+ dail+G++t ++d+p+lt rw + + a a++  +qp+ +++d + r+    +      
  KHJ30411.1  52 PHVTVTYAASLESAIAIAPKTTTLISGYQSKAMTHYLRAKYDAILIGSTTAITDDPRLTSRWIGVNTA-ANPLDQQPRPIIMDPSGRWLNGLTgeenll 149
                 89***************************************************************866.67777*************88777799**99 PP

                 .HHHSS..S-EEEEESSCSCHHHHHHCC...........E.........SE-HHHHHHHHHHTT--EEEEEETHHHHHHHHHTT...T-SEEEEEEESC CS
      RibD_C  94 .vltdd..aptlvatteeadkekveklk...........v.........rvdlkelleeLkergirsllveGGatLagsllrag...lvDelrlyiaPk 166
                  + + +   +++v+t ++++  k e l+           v          v+++++l+e    gi sl++eGGat++++llr++    + +++++iaP+
  KHJ30411.1 150 rLARNGhgHAPWVITDKNIS-IKPEALThllstggrwleVylnyegkseGVNWEAVLSEIVSLGILSLMIEGGATVINDLLRKKnrhYITSIIVTIAPI 247
                 9555444899*****99753.3333343344877776662777889999********************************9754448*********** PP

                 E--TTSBCSSSSST-SS.....EEEEEEEEEEETTEEE CS
      RibD_C 167 llGgagktlfdgegfka.....lklklvksealgegvv 199
                  lG  g  +++ + ++       kl+  ++  +g++vv
  KHJ30411.1 248 YLGT-GGVVVSPQRIEGndddsFKLREIRWIPMGNDVV 284
                 ****.999999888887889999999999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       345  (0.0192426); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 2289.70
//
Query:       KHJ30412.1  [L=130]
Description: putative 40s ribosomal protein s22 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.3e-22   77.7   0.0    9.6e-22   77.3   0.0    1.2  1  Ribosomal_S8  Ribosomal protein S8


Domain annotation for each model (and alignments):
>> Ribosomal_S8  Ribosomal protein S8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.3   0.0   5.4e-26   9.6e-22       3     127 .]       7     130 .]       5     130 .] 0.88

  Alignments for each domain:
  == domain 1  score: 77.3 bits;  conditional E-value: 5.4e-26
                   HHHHHHHHHHHHHTT-SEEEE.E--HHHHHHHHHHHHCTSEEEEEEE.CCCCCCEEEEE-BSSS-SBSSSEEEE-SBTTC--EE-CCC---CGGGTS CS
  Ribosomal_S8   3 iadmltrirNaekakkeevev.pasklkeeilkvLkeeGyikdfeve.eekkkkikielkynkkkksvikklkrvskpgrrvYakvkelpkvlnglG 97 
                   ++d+l++i+Nae+a+k++v + p+sk++ + l+v++++Gyi +fe + ++++ ki i+l+ + +k++vi+   +v  + ++ ++ vk lp+  + +G
    KHJ30412.1   7 LNDALNSINNAERAGKRQVLIrPSSKVIVKFLSVMQKHGYIGEFEEVdDHRSGKIVIQLNGRLNKTGVISPRYNVRLADLEKWV-VKLLPS--RQFG 100
                   78********************************************86666667666666666669****99999999999554.455664..679* PP

                   EEEEEETTEEEEHHHHHHCT--EEEEEEEE CS
  Ribosomal_S8  98 iaivsTskGvmtdkeArkkkvGGevlayvw 127
                    ++++Ts+G+m ++eAr+k+v G+++ + +
    KHJ30412.1 101 YMVLTTSAGIMDHEEARRKHVAGKIIGFFY 130
                   **************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       464  (0.0258799); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 976.66
//
Query:       KHJ30413.1  [L=172]
Description: hypothetical protein EV44_g3740 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       352  (0.019633); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 1336.35
//
Query:       KHJ30414.1  [L=476]
Description: hypothetical protein EV44_g0451 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1471  (0.0820458); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                       173  (0.00964917); expected 17.9 (0.001)
Passed Fwd filter:                        86  (0.0047967); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.67u 0.38s 00:00:02.04 Elapsed: 00:00:00.57
# Mc/sec: 2531.72
//
Query:       KHJ30415.1  [L=155]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       832  (0.0464053); expected 358.6 (0.02)
Passed bias filter:                      602  (0.0335769); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1152.35
//
Query:       KHJ30416.1  [L=178]
Description: putative gamma interferon inducible lysosomal thiol reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.8e-17   62.5   0.3    7.3e-17   61.6   0.3    1.5  1  GILT       Gamma interferon inducible lysosomal thiol reducta
  ------ inclusion threshold ------
       0.12   12.2   0.0        2.9    7.8   0.0    2.1  2  CI-B14_5a  NADH:ubiquinone oxidoreductase subunit B14.5a (Com


Domain annotation for each model (and alignments):
>> GILT  Gamma interferon inducible lysosomal thiol reductase (GILT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.6   0.3   8.1e-21   7.3e-17       7     103 ..       1      94 [.       1     110 [. 0.87

  Alignments for each domain:
  == domain 1  score: 61.6 bits;  conditional E-value: 8.1e-21
        GILT   7 eslCpdsrkfitkqllptlelklkkivdlklvpfGkakeeskeeeleftCqhGeeECegNklqaCalellkdeekalkliaCmesskek...eeaaekC 102
                 +s+Cpd++++++  +lpt+e +++++++++l ++G+++ ++      + C hG+eEC gN+ + Ca+++++d++ +l +  C++++ ++   +  +e+C
  KHJ30416.1   1 MSKCPDAQDCLKMMVLPTME-RISEKINFTLSYIGETTPND-----GVYCMHGPEECMGNIAELCAAKVYPDPKIYLGYAMCLSREYSEipdRGLLEEC 93 
                 699*****************.999***********554433.....69***********************************9943322346666778 PP

        GILT 103 a 103
                 a
  KHJ30416.1  94 A 94 
                 6 PP

>> CI-B14_5a  NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.019   1.7e+02      23      48 ..      56      81 ..      52      87 .. 0.89
   2 ?    7.8   0.0   0.00032       2.9      42      61 ..     138     157 ..     123     168 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.019
   CI-B14_5a 23 edeiakRtqppPklPdGpshklsany 48
                ++ +a++  p Pk+  G +  ls+ y
  KHJ30416.1 56 AELCAAKVYPDPKIYLGYAMCLSREY 81
                68899*************99999876 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00032
   CI-B14_5a  42 hklsanyYytRDaRRevapp 61 
                  +l++  Y+ RD+R+ v+ p
  KHJ30416.1 138 VRLNEKIYCVRDGRKWVECP 157
                 5789999********99877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1365.75
//
Query:       KHJ30417.1  [L=1331]
Description: putative wd repeat-containing [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       690  (0.0384851); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.80u 0.30s 00:00:01.10 Elapsed: 00:00:00.46
# Mc/sec: 8619.88
//
Query:       KHJ30418.1  [L=757]
Description: putative heat shock protein mitochondrial precursor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (757 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.30s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 5025.30
//
Query:       KHJ30419.1  [L=230]
Description: putative hsp70 nucleotide exchange factor fes1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.5e-25   88.7   4.3    1.4e-24   86.8   0.7    2.4  2  Fes1          Nucleotide exchange factor Fes1
    0.00016   21.6   0.0       0.12   12.7   0.0    3.1  3  HEAT          HEAT repeat
    0.00053   20.3   0.2      0.002   18.5   0.1    2.0  1  HEAT_2        HEAT repeats
    0.00062   19.7   0.0       0.21   11.7   0.0    2.7  2  Arm           Armadillo/beta-catenin-like repeat
     0.0058   17.1   0.0      0.042   14.4   0.0    2.4  2  HEAT_EZ       HEAT-like repeat
     0.0059   15.9   0.0     0.0076   15.6   0.0    1.2  1  V-ATPase_H_N  V-ATPase subunit H
  ------ inclusion threshold ------
      0.029   13.7   0.0      0.069   12.5   0.0    1.6  1  PPR_long      Pentacotripeptide-repeat region of PRORP


Domain annotation for each model (and alignments):
>> Fes1  Nucleotide exchange factor Fes1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.8   0.7   5.5e-28   1.4e-24       1      93 []      25     107 ..      25     107 .. 0.87
   2 ?    3.2   0.2     0.062   1.6e+02      50      86 ..     180     224 ..     137     230 .] 0.74

  Alignments for each domain:
  == domain 1  score: 86.8 bits;  conditional E-value: 5.5e-28
        Fes1   1 lneLLkWsienstaedasaseqeaesaaeaakaskekldpeildallggpsdaelmkeamevlede..evtlenkliAldnleqlieslDnAnnL 93 
                 lneLL+Ws++nst+       ++a+++++      + l+p+ l+al+ggp+daelm  +me+++++  +v+le+kl A+dn+eql+e++DnAnnL
  KHJ30419.1  25 LNELLRWSVANSTN------PPDASAISN------QGLNPNSLNALFGGPTDAELMITSMEAIRSSnpDVKLEDKLVAFDNFEQLVENIDNANNL 107
                 89*******99422......233344444......79**************************98788**************************8 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.062
        Fes1  50 psdaelmkeamevlede.......evtlenk.liAldnleqlies 86 
                  s     + am+vl+de       +++++ k ++A+d+l +  ++
  KHJ30419.1 180 SSACRNYQPAMDVLTDElrklgkrSASVDAKdMEACDELMEALKE 224
                 455566778899999888888888777777657899988776555 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       5.2   1.3e+04      19      30 ..      89     100 ..      88     101 .. 0.79
   2 !   12.7   0.0   4.7e-05      0.12       4      28 ..     115     139 ..     112     141 .. 0.89
   3 !    5.6   0.0    0.0088        23      12      29 ..     167     184 ..     155     186 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 5.2
                 HHHHHHHHHHHC CS
        HEAT  19 aAakaLgalaev 30 
                  A+ ++ +l+e+
  KHJ30419.1  89 VAFDNFEQLVEN 100
                 588899999986 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 4.7e-05
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                 +ll++l +++  +R++Aa+++g+ +
  KHJ30419.1 115 PLLECLDHEEGGIRKMAAWCIGTAV 139
                 589*******************866 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.0088
                 SSHHHHHHHHHHHHHHHH CS
        HEAT  12 pspeVReaAakaLgalae 29 
                 ++ +VR+ A++aL   ++
  KHJ30419.1 167 EATQVRKKAIYALSSACR 184
                 7789*********98776 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.1   7.8e-07     0.002       3      69 ..     115     195 ..     113     210 .. 0.77

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 7.8e-07
      HEAT_2   3 aLlqalendpdpevrraairaLg.....rignp......ealpaLvell..ededpavRraaaeaLg.aigd.pealpaLke 69 
                 +Ll+ l ++++  +r++a++++g     +i+ +        lp Lv+++  e e + vR+ a+ aL+ a+++ + a ++L++
  KHJ30419.1 115 PLLECL-DHEEGGIRKMAAWCIGtavqnNIKGQemllakAGLPKLVKIAtaEGEATQVRKKAIYALSsACRNyQPAMDVLTD 195
                 699999.9***************877664443355555466******9965568899*********8344433446666655 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   8.2e-05      0.21      16      37 ..     115     136 ..     114     137 .. 0.96
   2 !    5.3   0.0    0.0083        21       6      41 .]     148     184 ..     144     184 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 8.2e-05
                 HHHHHTTTSSHHHHHHHHHHHH CS
         Arm  16 pLvrLLssedeevqeeAawALs 37 
                 pL+++L++e  ++++ Aaw+++
  KHJ30419.1 115 PLLECLDHEEGGIRKMAAWCIG 136
                 8*******************97 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0083
                 HHHHHTTHHHHHHHHTT..TSSHHHHHHHHHHHHHHTT CS
         Arm   6 davieaGavppLvrLLs..sedeevqeeAawALsNLaa 41 
                 +++ +a ++p Lv+  +   e ++v++ A  ALs  ++
  KHJ30419.1 148 MLLAKA-GLPKLVKIATaeGEATQVRKKAIYALSSACR 184
                 567788.9*************************98775 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.99   2.5e+03       7      27 ..      54      70 ..      49      82 .. 0.83
   2 !   14.4   0.0   1.6e-05     0.042       3      53 ..     127     180 ..     126     182 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.99
     HEAT_EZ  7 AawaLGrlaggepellqplvp 27
                 ++aL    +g+p + +++++
  KHJ30419.1 54 SLNAL----FGGPTDAELMIT 70
                67888....999999998876 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 1.6e-05
     HEAT_EZ   3 vRraAawaLGr.laggepellqp.lvpeilpaLlalLnddsd..eVRaaAagaLg 53 
                 +R  Aaw++G+ + +++   ++  l ++ lp L++  + +     VR++A++aL+
  KHJ30419.1 127 IRKMAAWCIGTaV-QNNIKGQEMlLAKAGLPKLVKIATAEGEatQVRKKAIYALS 180
                 6999*******63.4444444444888*******999776665788********8 PP

>> V-ATPase_H_N  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0     3e-06    0.0076      89     174 ..      93     180 ..      82     223 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3e-06
  V-ATPase_H_N  89 srvelflslakkeeqd...pwkpflkllnrqddfivllalrllakllvqgkkksnklv..esaLnrllqlLssqlssstnevieiavrllq 174
                   ++++l++++ + ++ +   +w+p+l++l+++++ i ++a+  + + +  +  k +++   +  L++l+++ +   ++   +v + a+ +l+
    KHJ30419.1  93 NFEQLVENIDNANNLEstrLWGPLLECLDHEEGGIRKMAAWCIGTAVQNN-IKGQEMLlaKAGLPKLVKIATAEGEA--TQVRKKAIYALS 180
                   4555555544433333345*********************9998866555.55555445888899999998874444..344444444433 PP

>> PPR_long  Pentacotripeptide-repeat region of PRORP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.7e-05     0.069      97     179 ..      82     171 ..      63     195 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.7e-05
                 HHHHHHTT-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHH.TT-HHH......HHHHHHHHHHCT----HHHHHHHHHHHHHTT-HHHH CS
    PPR_long  97 arlaaakedgdlafelvkemekagvsPrLRsyaPaLaayck.agdadk......aleveehlkasgveleEaelaaLLkvsakagredkv 179
                 ++l  +   +d+ ++lv+++ +a+     R ++P+L ++ +  g + k      + +v++ +k +++ l  a l  L k++++ g++ +v
  KHJ30419.1  82 VKLEDKLVAFDNFEQLVENIDNANNLESTRLWGPLLECLDHeEGGIRKmaawciGTAVQNNIKGQEMLLAKAGLPKLVKIATAEGEATQV 171
                 56666667899999************************9641455555322222357******************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1643.89
//
Query:       KHJ30420.1  [L=347]
Description: putative 50s ribosomal subunit l7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-26   91.3   0.0    5.6e-26   90.5   0.0    1.4  1  Ribosomal_L5_C  ribosomal L5P family C-terminus
    3.5e-13   49.7   0.1    6.6e-13   48.8   0.1    1.4  1  Ribosomal_L5    Ribosomal protein L5


Domain annotation for each model (and alignments):
>> Ribosomal_L5_C  ribosomal L5P family C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.5   0.0   6.3e-30   5.6e-26       1      94 []     245     344 ..     245     344 .. 0.98

  Alignments for each domain:
  == domain 1  score: 90.5 bits;  conditional E-value: 6.3e-30
  Ribosomal_L5_C   1 piGvkvtLrgekmyefldkllevvlprlrdFkGiskssfdgrGnvsfGikeqii..fpeieydkd....kgifGmditivttaktdeearallke 89 
                     pi+v+ tLr   +yefldk++++++p+l+d+ Gi+++++d++Gn+++G++++ +  fpe+++++d    k+i G++++++t+a++d++ar ll +
      KHJ30420.1 245 PIAVSATLRDSMAYEFLDKCVNLIFPKLKDWPGIKEKTGDKSGNLAWGFSPDGVilFPEVQVNYDmyppKMIPGFHVIVKTSATSDRQARLLLAG 339
                     79*************************************************99889*************************************** PP

  Ribosomal_L5_C  90 lgipf 94 
                     lg+pf
      KHJ30420.1 340 LGVPF 344
                     ****9 PP

>> Ribosomal_L5  Ribosomal protein L5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.1   7.4e-17   6.6e-13       4      57 .]     188     241 ..     187     241 .. 0.98

  Alignments for each domain:
  == domain 1  score: 48.8 bits;  conditional E-value: 7.4e-17
                   TS-EEEEEEEEEE-SSSSSCHHHHHCCHHHHCCCHSS--EECC--TTCTTTCSC CS
  Ribosomal_L5   4 qvPrleKivinmgvGeagedkkllekaakeLaeItGQkPvvtkakksianFkiR 57 
                   ++Pr+++i++++ v+ a+++ ++l+ a + L+++tG ++ v+ akks++++k+R
    KHJ30420.1 188 NIPRITEITVHSFVKNAVDNTAYLHVAGMLLQAVTGVRAQVHNAKKSVSAWKLR 241
                   58***************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       339  (0.0189079); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2680.43
//
Query:       KHJ30421.1  [L=534]
Description: hypothetical protein EV44_g1719 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1140  (0.0635841); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.40
# Mc/sec: 4028.98
//
Query:       KHJ30422.1  [L=137]
Description: hypothetical protein EV44_g0325 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       616  (0.0343577); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1107.59
//
Query:       KHJ30423.1  [L=915]
Description: putative serine threonine protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.8e-85  284.2   0.4    1.3e-84  283.5   0.4    1.4  1  DUF3543          Domain of unknown function (DUF3543)
    1.4e-61  208.2   0.0    3.2e-61  207.0   0.0    1.7  1  Pkinase          Protein kinase domain
    1.2e-41  142.7   0.0    2.6e-41  141.6   0.0    1.5  1  Pkinase_Tyr      Protein tyrosine kinase
  ------ inclusion threshold ------
      0.054   12.4   0.0      0.088   11.8   0.0    1.2  1  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
       0.11   12.4   0.0        1.1    9.1   0.0    2.2  2  APH              Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> DUF3543  Domain of unknown function (DUF3543)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  283.5   0.4   3.7e-88   1.3e-84       2     250 ..     615     901 ..     614     902 .. 0.90

  Alignments for each domain:
  == domain 1  score: 283.5 bits;  conditional E-value: 3.7e-88
     DUF3543   2 eedtklletleelaakadvvyefAevKfkqliPlapsskeglgaeeaksesnsssaiedeeltpeaivslseealvLYvkalsllakamdiaskwWkkk 100
                 +ed++ l+++ee a+++dvv++fAevK+kql+P++ps + glg++++   +++   +ede+lt+eaivslseealvLY+kalsllak+mdia++wW++k
  KHJ30423.1 615 DEDQRCLNEIEESATRSDVVFGFAEVKYKQLVPSTPSIEYGLGGSDNC--KEEYLLHEDEGLTIEAIVSLSEEALVLYIKALSLLAKSMDIARAWWSRK 711
                 7899************************************99999755..5689999****************************************** PP

     DUF3543 101 n..............akkgekvvslrlnevvqwirerFnevleKaefvrlklqeaqkqlpedhp...e....saessseevslsegvtaekLiYDrAle 178
                 +              ++++++ +++r+n+++qw+r+rFnev+eKae++ lkl +aqkqlpedhp   +     +++ ++++ l++gvtaekL+YDrA++
  KHJ30423.1 712 SrgefhhgqqssnrsDTPSNTGTTTRINQAIQWVRNRFNEVFEKAELISLKLLDAQKQLPEDHPaylNpaslGSTNVNHNIILTSGVTAEKLMYDRAID 810
                 *************998889999******************************************6651554555558899******************* PP

     DUF3543 179 mSraAAvnEltgedlkgCelaYetaiwmLeall..........dedeeeenkkee...................eldeeDrkviekliksiknRLkalr 248
                 mSr+AA+ El +ed++gCe +Y ta++mLea+l                     +                    +d  D++++ k+i++ik RL+ l+
  KHJ30423.1 811 MSRSAAICELANEDIDGCERSYITAVRMLEAVLefdaepslhlP----------KkrsgnskdttaekqvefmnGIDLADQQAVLKVISMIKIRLNNLQ 899
                 *********************************55555555540..........33445555556666678888************************9 PP

     DUF3543 249 kk 250
                 +k
  KHJ30423.1 900 RK 901
                 98 PP

>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  207.0   0.0   8.9e-65   3.2e-61       2     262 ..      10     312 ..       9     314 .. 0.91

  Alignments for each domain:
  == domain 1  score: 207.0 bits;  conditional E-value: 8.9e-65
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HH.. CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslsee.. 98 
                 + + ++G+Gsf++Vy++ +k+tg  vAvK ++ +k +kk ++++ +Ei ilk l+hp+ v l+++ e+++++ylv+ey+e g+l  +++++ sl e+  
  KHJ30423.1  10 SIEDEIGRGSFATVYRGQHKATGALVAVKSVNLSKLNKKLKENLYTEIDILKGLHHPHAVALIDCRESNTHIYLVMEYCELGDLSYFIRKRDSLGEHea 108
                 56789************************************************************************************9999999899 PP

                 ...................HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEET........................TTE.......EEE-SGTTSEE CS
     Pkinase  99 ...................eakkiakqilegleylHskgiiHrDlKpeNiLide........................kge.......lKitDFGlake 147
                                     +++++kq++++le+l ++++iHrD+Kp+N+Li                          k +       lKi+DFG+a+ 
  KHJ30423.1 109 lrdmvrrypmppvgglpevIVRHFLKQLASALEFLRARNFIHRDVKPQNLLIIPspeflanarerpvamkgsasslqpK-VglislpmLKIADFGFARS 206
                 9999*************9999*******************************954999999999999998887777650.15566666*********** PP

                 SSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT- CS
     Pkinase 148 lessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllk 246
                 l s s +++ +g++ Y+APE+l+ ++y++k+D+Ws+G +l+e++t kppf+++++ e     l+++e++ +        +p++  is+++kd++k llk
  KHJ30423.1 207 LPSASLAETLCGSPLYMAPEILRFEKYDAKADLWSVGAVLFEMMTAKPPFRASNHVE----LLRKIEQSND-----FIRFPKDVAISPQMKDIIKALLK 296
                 ***************************************************555544....4444333333.....3478999999************* PP

                 SSGCCSTTHHHHHTSG CS
     Pkinase 247 kdpkkRltaeellqhp 262
                 ++p+ R+++e   +hp
  KHJ30423.1 297 RTPTVRMSFERFFEHP 312
                 ***************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.6   0.0   7.2e-45   2.6e-41       3     255 ..      11     308 ..       9     311 .. 0.91

  Alignments for each domain:
  == domain 1  score: 141.6 bits;  conditional E-value: 7.2e-45
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEES.TTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT.... CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlk.eeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkk.... 95 
                  +++++G+G+f++V++g+ k     +   VavK+++ ++ +++ ke+l++e++i+k l+hp+ v+l+ +  ++ ++++v+ey++ GdL+ f+rk+    
   KHJ30423.1  11 IEDEIGRGSFATVYRGQHK----ATGALVAVKSVNlSKLNKKLKENLYTEIDILKGLHHPHAVALIDCRESNTHIYLVMEYCELGDLSYFIRKRdslg 104
                  7899*************99....9999*******72455556699***************************************************** PP

                  ...............CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE..............................TTEEEE-STT CS
  Pkinase_Tyr  96 ...............ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse..............................nkvvkisDfG 148
                                     l    + +f  q+A+++e+L +++++Hrd+  +N L+                                  + ki+DfG
   KHJ30423.1 105 ehealrdmvrrypmpPVGGLPEVIVRHFLKQLASALEFLRARNFIHRDVKPQNLLIIPspeflanarerpvamkgsasslqpkvglisLPMLKIADFG 202
                  ************988777788888899*****************************98899*************************98889******* PP

                  THEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTE...ES-BBTTSBHHHHHHHHHHT- CS
  Pkinase_Tyr 149 LardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevleklkegk...rlekpekcpeelyelmkkcwe 243
                   ar++    + + +e+   +  +mapE+l+ +k+  k+D Ws G +l+E++t ++ p++  ++ e+l+k+++++   r +k   +++++++++k  ++
   KHJ30423.1 203 FARSL---PSASLAETLCGSPLYMAPEILRFEKYDAKADLWSVGAVLFEMMT-AKPPFRASNHVELLRKIEQSNdfiRFPKDVAISPQMKDIIKALLK 296
                  *****...444444445555569*****************************.9****************7776233567777899************ PP

                  SSGGGS--HHHH CS
  Pkinase_Tyr 244 edpeeRptfsel 255
                  ++p+ R +f++ 
   KHJ30423.1 297 RTPTVRMSFERF 308
                  *********986 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.5e-05     0.088     296     319 ..     144     167 ..     128     177 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.5e-05
  Pox_ser-thr_kin 296 dcenflhvDlkPdniLifdskekl 319
                        +nf+h D+kP+n+Li +s e l
       KHJ30423.1 144 RARNFIHRDVKPQNLLIIPSPEFL 167
                      568****************98765 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.11   3.8e+02      25      81 ..      37      92 ..      14     116 .. 0.58
   2 ?    9.1   0.0   0.00031       1.1     145     181 ..     125     161 ..      95     167 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.11
                EEEE-TT....S-HHHHHHHHHHHHHHHHTT-.B--B-CTTBS-EEETTEEEEEEE----EE CS
         APH 25 lrrnppa....raaeeirrevallrlLakagv.pvPevlagdtddeeigllfalieyvpgrs 81
                ++ ++ +    +++e +  e ++l+ L+     ++ +++++++++++i+l   ++ey++  +
  KHJ30423.1 37 VKSVNLSklnkKLKENLYTEIDILKGLH---HpHAVALIDCRESNTHIYL---VMEYCELGD 92
                5555555322233444444444444443...3367799**99******96...555555444 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00031
                 HHHHHHHHHHHHHHH--SSS-EEEE-SS-SGGGEEEC CS
         APH 145 leeleeqvlaalaallpgelptvllHgDlhpgNllvd 181
                  e + + +l +la  l    ++ ++H+D +p+Nll+ 
  KHJ30423.1 125 PEVIVRHFLKQLASALEFLRARNFIHRDVKPQNLLII 161
                 345555566777777777999**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (915 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       636  (0.0354733); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.30s 00:00:00.99 Elapsed: 00:00:00.46
# Mc/sec: 5991.99
//
Query:       KHJ30424.1  [L=94]
Description: hypothetical protein EV44_g3575 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       221  (0.0123264); expected 358.6 (0.02)
Passed bias filter:                      176  (0.0098165); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.26s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 714.25
//
Query:       KHJ30425.1  [L=317]
Description: putative cytochrome p450 52a12 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-09   36.7   0.0    4.5e-09   35.7   0.0    1.6  1  Whi5      Whi5 like


Domain annotation for each model (and alignments):
>> Whi5  Whi5 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.0   2.5e-13   4.5e-09       2      25 .]      28      51 ..      27      51 .. 0.97

  Alignments for each domain:
  == domain 1  score: 35.7 bits;  conditional E-value: 2.5e-13
        Whi5  2 LktRLqlAmyKvqtGwedlsLdel 25
                LktRL++A++Kv +G edl++d++
  KHJ30425.1 28 LKTRLAFAQFKVAHGLEDLPFDTI 51
                9*********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 2237.05
//
Query:       KHJ30426.1  [L=524]
Description: putative cytochrome p450 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-55  187.9   0.0    3.8e-55  187.5   0.0    1.0  1  p450      Cytochrome P450


Domain annotation for each model (and alignments):
>> p450  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.5   0.0   2.1e-59   3.8e-55      24     437 ..      73     493 ..      60     512 .. 0.84

  Alignments for each domain:
  == domain 1  score: 187.5 bits;  conditional E-value: 2.1e-59
                 HHHHHHHHHH-SEEEEEETTEEEEEEESHHHHHHHHCTSTTTTC.EESSHHHHHHHHHTTTTSSSTTCGHHHHHHHHHHHHHHHTSH..STTTHHHHHH CS
        p450  24 evlrklqkkygpifrlklgskpvvvlsgpeavkevlikkgeefs.grpdeallatsrkpfkgkgvlfangekwkklRrfltptltsf..gklsleelve 119
                 + +++l +  gp++ + l + +++  s+ e +k+ l  + ++f  g+ ++  +     p +g g+++++g+ w+  R +l p++      +l+lee+  
  KHJ30426.1  73 DSVKRLYEMDGPTYEMNLLGMSIISTSDEENIKAMLAVQFKDFDlGDCRRGSF----WPLLGDGIFTQDGPAWEHSRALLRPQFAREqiSNLKLEETHV 167
                 4567778888*****************************76665222233333....3799************************99655557777777 PP

                 HHHHHHHHHHHCCCCHCS..EEETHHHHHHHHHHHHHHHHHSSHHHT...TTSSHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHTCCSCHHHHHHHHHH CS
        p450 120 eeaedlveklrkkagess..elditellskaaldvigsilFgarfdl...ledeklselvkaveelssllskssvqllllfpllkylptkllrklkeav 213
                 + + + +e+l + ++e     +di+ l+++ +ld+ ++ lFg+++d+   l  e   e+ +      s ++k    l +  ++ +  +t   + +kea+
  KHJ30426.1 168 QNMMRALETLTPINSEGWieDVDIQVLFFRLTLDSATEFLFGKSVDSqvlLLRECKDEFSQNLGSFASAFDKAQLALSKRAHFGDLYWTVSPKGFKEAC 266
                 77777777777777777699************************985222333335577777777777888877777777778888999999******* PP

                 HHHHHHHHHHHHHHHHCHCHC....SCSSCSHHHHHHHHCTTCTCTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHCC CS
        p450 214 kklkdlldklieerretldsa....kksrrdfldalllakkekkgesklsdeelaatvlellfaGvdTtsstlswaLyeLaknPevqeklreEidevlg 308
                 +k ++++d+++ e  ++  ++    +++++ fl al++++         +   l+ ++l++l+aG dTt+s lsw +++L ++P   +klr  + + +g
  KHJ30426.1 267 RKCHEFIDHFVYEALAKEPNEkineTERNYVFLEALIEET--------RDPLALRSQLLNVLLAGRDTTASLLSWLFFLLSQDPVRYKKLRDIVIKEFG 357
                 ***********99999988887777678888888888885........46799**************************************88777776 PP

                 TTT...T-HHHHCCT-HHHHHHHHHHHHHSCSSTTEEEEESSSCEEETT.........EEE-TT-EEEEEHHHHHT-TTTS.SSTTS--GGGGB-TTSC CS
        p450 309 dkr...eptyddlqklpyldavikEtLRlhpvvplllpRevtkdvvirg.........ylipkGtevivnlyalhrdpevf.pnPeeFdpeRFldekgn 394
                   +   ++t++ ++   yl+ +  E+LRl+p+vp    R+++kd++++           +ipkG+ +  +++ +hr+++++ +++eeF+peR+  +k+ 
  KHJ30426.1 358 TYDnprNITFASMKACQYLQYCNSESLRLYPPVP-MNGRVAKKDTTLPRgggkdrkskIFIPKGQLIEYSVHVMHRRKDIWgEDAEEFNPERWIGRKV- 454
                 5555669***************************.667*********844678889999*************************************88. PP

                 TESSCTT--TTEEGGGS-TTHHHHHHHHHHHHHHHHHHEEEEE CS
        p450 395 skrksfaflPFGaGpRnCiGerlArmelklflatlLqnFevel 437
                       +flPF  GpR+C+G+++A  e +++ ++lLq+F+   
  KHJ30426.1 455 ----GWEFLPFNGGPRICVGQQFALTEASYVTIRLLQRFDSMH 493
                 ....599********************************9763 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (524 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       683  (0.0380947); expected 358.6 (0.02)
Passed bias filter:                      645  (0.0359752); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3594.17
//
Query:       KHJ30427.1  [L=347]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.8e-22   77.2  11.6    3.6e-06   27.6   0.2    6.7  7  WD40           WD domain, G-beta repeat
      1e-16   61.0   0.0     0.0051   17.1   0.0    5.7  6  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    5.4e-05   23.2   0.0          2    8.2   0.0    3.6  4  eIF2A          Eukaryotic translation initiation factor eIF2A
     0.0035   16.4   0.0        3.9    6.4   0.0    3.2  3  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping
     0.0045   15.7   0.3      0.072   11.7   0.0    2.5  3  Nup160         Nucleoporin Nup120/160
  ------ inclusion threshold ------
      0.015   13.9   0.0       0.38    9.2   0.0    2.1  2  Cytochrom_D1   Cytochrome D1 heme domain
       0.17   10.9   0.0       0.92    8.5   0.0    2.0  2  Coatomer_WDAD  Coatomer WD associated region


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.2   1.4e-09   3.6e-06       7      38 .]      39      69 ..      33      69 .. 0.90
   2 !   14.3   0.1   2.2e-05     0.057       5      38 .]      84     120 ..      80     120 .. 0.79
   3 ?   -0.6   0.0       1.1   2.9e+03      16      29 ..     139     152 ..     128     158 .. 0.83
   4 ?   -0.3   0.0      0.89   2.3e+03       9      36 ..     170     200 ..     162     200 .. 0.53
   5 !   16.8   0.0   3.7e-06    0.0096       6      38 .]     221     254 ..     216     254 .. 0.88
   6 !   12.9   0.1   6.2e-05      0.16       3      32 ..     260     290 ..     258     291 .. 0.75
   7 !    6.4   0.2    0.0071        18       4      26 ..     307     328 ..     301     334 .. 0.80

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 1.4e-09
                EESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  7 ltGHssvtslafspdgawlasGsdDgtvriWd 38
                   H s++s+a++p g+++a+G  Dgtvr+W+
  KHJ30427.1 39 TISH-SIRSIAWNPLGTLIATGALDGTVRVWN 69
                4579.9****************99*******8 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 2.2e-05
                 EEEESS..SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   5 rtltGH..ssvtslafspdgaw.lasGsdDgtvriWd 38 
                  + +GH  s++  ++f+p ++  l+s s Dg v++Wd
  KHJ30427.1  84 SSSKGHhrSGIEKVSFNPVKDAeLCSVSSDGIVKFWD 120
                 4557998888****988888887665555*******9 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 1.1
                 EEEETTSSEEEEEE CS
        WD40  16 lafspdgawlasGs 29 
                 la+ p+g  l+ G 
  KHJ30427.1 139 LAWAPNGESLIVGN 152
                 89*****9999884 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 0.89
                 SS.SSE..E..EEEEETTSSEEEEEETTSEEEE CS
        WD40   9 GH.ssv..t..slafspdgawlasGsdDgtvri 36 
                  H ++v  +   +++s  + +l++ +  g v+i
  KHJ30427.1 170 SHqQNVqtNqiTFCYSGKKIFLTT-G-EGRVKI 200
                 565445422113446666666655.5.666665 PP

  == domain 5  score: 16.8 bits;  conditional E-value: 3.7e-06
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 t+ GH ss   +  +p+ ++la+G+ D  + +Wd
  KHJ30427.1 221 TINGHtSSCLTVEMQPNARFLATGGSDSIIALWD 254
                 567**887779999**********88*******9 PP

  == domain 6  score: 12.9 bits;  conditional E-value: 6.2e-05
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTS CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDg 32 
                 c+rtl    ++v+s++fs dg++++ Gsd g
  KHJ30427.1 260 CQRTLIDMtGPVRSISFSFDGSYIVGGSDEG 290
                 77777533245*************9888665 PP

  == domain 7  score: 6.4 bits;  conditional E-value: 0.0071
                 EEEEESSSSEEEEEEETTSSEEE CS
        WD40   4 lrtltGHssvtslafspdgawla 26 
                 ++t  GH + t ++++p++ wla
  KHJ30427.1 307 IKTPGGH-PCTVVSWHPSKYWLA 328
                 455669*.99999********96 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0     2e-06    0.0051      39      77 ..      42      80 ..      34      87 .. 0.89
   2 !    7.3   0.0    0.0023       5.9      35      77 ..      88     131 ..      75     136 .. 0.83
   3 !    8.5   0.0   0.00094       2.4      43      80 ..     138     175 ..     131     185 .. 0.80
   4 ?    1.8   0.0      0.12     3e+02      36      78 ..     172     214 ..     166     231 .. 0.77
   5 ?    4.5   0.0     0.017        42      35      68 ..     223     256 ..     205     265 .. 0.80
   6 !   16.2   0.0   3.8e-06    0.0098      38      90 ..     268     321 ..     259     323 .. 0.90

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 2e-06
  ANAPC4_WD40 39 sevrsLaWkpdgklLavaysdgevrlldaesgkvvhsls 77
                 +++rs+aW+p g+l+a +  dg+vr+ + e+ k + s +
   KHJ30427.1 42 HSIRSIAWNPLGTLIATGALDGTVRVWNPEKPKSIYSTE 80
                 689*************************99999888766 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0023
  ANAPC4_WD40  35 dkedsevrsLaWkp.dgklLavaysdgevrlldaesgkvvhsls 77 
                   ++ s +++++++p ++  L+ + sdg v++ d+ s+ ++++++
   KHJ30427.1  88 GHHRSGIEKVSFNPvKDAELCSVSSDGIVKFWDVRSKAIINEVK 131
                  5677889999999846778********************99875 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00094
  ANAPC4_WD40  43 sLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                   LaW p+g+ L v+ +  ++ +l+  + + ++s + + 
   KHJ30427.1 138 TLAWAPNGESLIVGNKADNLFILSPTQSTPISSHQQNV 175
                  69***************999999998888887766554 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.12
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                  +++ + +++ +  +gk +   + +g+v++l+    + v  l++
   KHJ30427.1 172 QQNVQTNQITFCYSGKKIFLTTGEGRVKILSYPAFEPVYYLRY 214
                  45566678999999***************99877666666555 PP

  == domain 5  score: 4.5 bits;  conditional E-value: 0.017
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldae 68 
                  +++ s+   ++ +p+ ++La + sd+ + l d  
   KHJ30427.1 223 NGHTSSCLTVEMQPNARFLATGGSDSIIALWDTT 256
                  5566677788999****************99865 PP

  == domain 6  score: 16.2 bits;  conditional E-value: 3.8e-06
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdg.evrlldaesgkvvhslsvksekavtclgWg 90 
                   + vrs++++ dg+ ++ + ++g  +++++ e+g+ vhs+++   +  t ++W 
   KHJ30427.1 268 TGPVRSISFSFDGSYIVGGSDEGtGLEIIHTETGEQVHSIKTPGGHPCTVVSWH 321
                  578******************99569***************9999889999996 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0   0.00079         2     103     147 ..      44      85 ..      21      94 .. 0.82
   2 !    5.0   0.0    0.0079        20     124     158 ..     113     148 ..     105     157 .. 0.84
   3 ?    3.4   0.0     0.024        61      64     117 ..     138     191 ..     127     218 .. 0.72
   4 !    5.1   0.0    0.0072        18      76     157 ..     241     326 ..     173     331 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00079
                 --EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT-- CS
       eIF2A 103 rNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanat 147
                   +i ++p g+l++++    l G++ +w+ +k k+i ++e   ++
  KHJ30427.1  44 IRSIAWNPLGTLIATG---ALDGTVRVWNPEKPKSIYSTELNLSS 85 
                 55799********986...57899*******99999998877665 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0079
                 S-EEEEEETTTTEEEEEEE-T.T--EEEE-TTSSEE CS
       eIF2A 124 aGeleiwdvkkkkkiakaeaa.natlvewspdgryv 158
                  G +++wdv +k  i++++   ++ ++ w p+g+ +
  KHJ30427.1 113 DGIVKFWDVRSKAIINEVKGLgETFTLAWAPNGESL 148
                 5889999*9999999999976367789999999865 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.024
                 EEEE-TTSS-EEEEESSSSCEEEEEECSCEEEEEEEEE.S--EEEE-TTSSEEEE CS
       eIF2A  64 dvaWspkskefaviyGkmpakvslfdlkvkviskleeq.krNtiffspkgklvll 117
                  +aW p+++ ++v   k+++   l  ++  +is+ +++ + N+i f+++gk + l
  KHJ30427.1 138 TLAWAPNGESLIV-GNKADNLFILSPTQSTPISSHQQNvQTNQITFCYSGKKIFL 191
                 6788888887644.33555555555556777766654437899999999987765 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.0072
                 EEESSSSCEEEEEECS...CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT...TTEEEEEEE-TT--EEEE-TTSSE CS
       eIF2A  76 viyGkmpakvslfdlk...vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvk...kkkkiakaeaanatlvewspdgry 157
                 +  G +++ ++l+d++   ++ +    + +  +i fs  g +++ +    +   lei  ++   ++++i++     +t+v w+p+  +
  KHJ30427.1 241 LATGGSDSIIALWDTTdwiCQRTLIDMTGPVRSISFSFDGSYIVGGSDEGT--GLEIIHTEtgeQVHSIKTPGGHPCTVVSWHPSKYW 326
                 456888999999999777788887778899999999999999986665555..58998888344555555666678999***998765 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0015       3.9     180     214 ..      34      68 ..      17      77 .. 0.80
   2 ?    3.3   0.0     0.013        33     189     217 ..      93     122 ..      73     136 .. 0.76
   3 ?    2.8   0.0     0.018        46     258     284 ..     240     265 ..     227     305 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0015
    Ge1_WD40 180 gllkieehsliveaafspdGtalatasedGevkff 214
                 ++ +i+    i + a+ p Gt +at + dG+v+ +
  KHJ30427.1  34 SVSRITISHSIRSIAWNPLGTLIATGALDGTVRVW 68 
                 4556666668999999*****************98 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.013
    Ge1_WD40 189 liveaafsp.dGtalatasedGevkffqvy 217
                  i + +f p   + l   s+dG+vkf+ v 
  KHJ30427.1  93 GIEKVSFNPvKDAELCSVSSDGIVKFWDVR 122
                 5666666662335588899********996 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.018
    Ge1_WD40 258 faitgadnnselklWscelWtClqtik 284
                 f+ tg + +s + lW +  W C +t+ 
  KHJ30427.1 240 FLATGGS-DSIIALWDTTDWICQRTLI 265
                 5555543.4567778888888877753 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   2.8e-05     0.072     210     325 ..      30     138 ..      15     147 .. 0.70
   2 !    5.1   0.0    0.0028       7.3     231     255 ..     105     129 ..      94     183 .. 0.79
   3 ?   -0.4   0.1      0.13   3.4e+02     228     259 ..     232     268 ..     152     291 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.8e-05
                 ---TT-ECEEEEET..........TTTEEEEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESEEESSSSEEEE..........E--GGG-E CS
      Nup160 210 ksgasvalsldvavavvei.....gqtylfalsrdgkLrvWnlltgkclatidllrdeeaqdessskstldpaesslirvsdggqsylvvtyspssgge 303
                 ++ +s  +s  ++++ +++       t++++  +dg++rvWn +  k +++ +l+      ++++    ++ ++ s+ +v d +      ++s ss+g 
  KHJ30427.1  30 YHEPS--VSRITISHSIRSiawnpLGTLIATGALDGTVRVWNPEKPKSIYSTELN----LSSSKGHH-RSGIEKVSFNPVKDAE------LCSVSSDGI 115
                 55555..44444444444445566678999999**********************....44444444.4556666666666444......356789999 PP

                 EEEEEEEEEE-....SSSEEEEE CS
      Nup160 304 fkvwkvkkedtsvs.lglvdlfl 325
                  k+w+v++++ + +  gl++ f+
  KHJ30427.1 116 VKFWDVRSKAIINEvKGLGETFT 138
                 99999999988777777777666 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0028
                 TEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 231 tylfalsrdgkLrvWnlltgkclat 255
                 + l+++s+dg ++ W+++++ ++  
  KHJ30427.1 105 AELCSVSSDGIVKFWDVRSKAIINE 129
                 5689**************9998876 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.13
                 .....TTTEEEEEETT-EEEEEETTTTEEEEE.EE-- CS
      Nup160 228 i....gqtylfalsrdgkLrvWnlltgkclat.idll 259
                 +    +  +l++  +d  + +W++++  c +t id++
  KHJ30427.1 232 VemqpNARFLATGGSDSIIALWDTTDWICQRTlIDMT 268
                 2223377788888888888899999999999999988 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.017        44      53      95 ..     110     152 ..     104     178 .. 0.90
   2 ?    9.2   0.0   0.00015      0.38      46     118 ..     237     310 ..     222     317 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.017
                   EETTSEEEEEESSSSSEEEEEE-SSEEEEEEE--TTSEEEEEE CS
  Cytochrom_D1  53 igRDgkvtliDLwakeivaevkiGlnarsvavSqddryvivgn 95 
                   ++ Dg v+  D+  k i++evk  +++  +a + ++  +ivgn
    KHJ30427.1 110 VSSDGIVKFWDVRSKAIINEVKGLGETFTLAWAPNGESLIVGN 152
                   789*******************99*********9999999998 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00015
                   .SSEEEEEETTSEEEEEESSSSSEEEE.EE-SSEEEEEEE--TTSEEEEEEEETTEEEEEETTT--EEEEEE-- CS
  Cytochrom_D1  46 dgRyvyvigRDgkvtliDLwakeivae.vkiGlnarsvavSqddryvivgnYlPgqlvildaetLelvkvisar 118
                   + R++ + g D+ + l D       ++ + + +  rs+  S d+ y+++g+ +  +l i+ +et e v+ i + 
    KHJ30427.1 237 NARFLATGGSDSIIALWDTTDWICQRTlIDMTGPVRSISFSFDGSYIVGGSDEGTGLEIIHTETGEQVHSIKTP 310
                   56777777777777666655544333326677889*********************************999875 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.16     4e+02     139     162 ..      35      59 ..      30      98 .. 0.77
   2 ?    8.5   0.0   0.00036      0.92     117     175 ..     105     165 ..      76     200 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.16
                    XXXXXXXX.XXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 139 vrridvkk.vknVvwsddgelvalv 162
                    v+ri+++  ++ + w++ g+l+a  
     KHJ30427.1  35 VSRITISHsIRSIAWNPLGTLIATG 59 
                    8999999779*******99999965 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00036
                    XXXXXXXXXX.XXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXX CS
  Coatomer_WDAD 117 GalLgvksegsvsfYDweqgklvrrid.vkkvknVvwsddgelvalv.skdtvyilsynle 175
                      l  v+s+g+v f+D+ ++ ++ +++ + +     w ++ge +++  + d+++ils ++ 
     KHJ30427.1 105 AELCSVSSDGIVKFWDVRSKAIINEVKgLGETFTLAWAPNGESLIVGnKADNLFILSPTQS 165
                    67778999*******************66679*********99988734678888887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       279  (0.0155614); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 2509.42
//
Query:       KHJ30428.1  [L=367]
Description: hypothetical protein EV44_g6400 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       803  (0.0447878); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 2942.54
//
Query:       KHJ30429.1  [L=267]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       864  (0.0481901); expected 358.6 (0.02)
Passed bias filter:                      576  (0.0321267); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2025.20
//
Query:       KHJ30430.1  [L=394]
Description: putative glycosyl [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.23   12.2   0.8       0.47   11.3   0.8    1.4  1  DUF780    Caenorhabditis elegans protein of unknown function 


Domain annotation for each model (and alignments):
>> DUF780  Caenorhabditis elegans protein of unknown function (DUF780)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.8   2.6e-05      0.47      20      64 ..     130     177 ..     124     180 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.6e-05
      DUF780  20 snasssGyaredyasGGsggsas...nqsqgsGgntnaGgqvfkartd 64 
                 sn+sss y + +y + G  +        +++ G++ + G+++f ++++
  KHJ30430.1 130 SNTSSSQYHQLEYPERGYDSTYLaerHYQTARGQGKGQGNRIFNSKIK 177
                 9************9999777643223456678999999******9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2771.76
//
Query:       KHJ30431.1  [L=356]
Description: putative alternative oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2549.45
//
Query:       KHJ30432.1  [L=142]
Description: putative air1 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.44
# Mc/sec: 979.05
//
Query:       KHJ30433.1  [L=99]
Description: hypothetical protein EV44_g0522 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       814  (0.0454013); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 714.97
//
Query:       KHJ30434.1  [L=438]
Description: hypothetical protein EV44_g5877 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0031   17.3   1.6      0.011   15.6   0.0    2.6  2  KilA-N    KilA-N domain
     0.0093   16.4   0.8       0.02   15.3   0.4    1.7  2  hSH3      Helically-extended SH3 domain


Domain annotation for each model (and alignments):
>> KilA-N  KilA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.2e-06     0.011       7      53 ..      82     128 ..      78     159 .. 0.73
   2 ?   -2.1   0.8      0.38   3.4e+03      50      50 ..     354     354 ..     292     404 .. 0.60

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.2e-06
      KilA-N   7 eiiirrvkdgyinatkllkaaaedtkriddWlrnkstkelleeleed 53 
                 ++++rr++dgyi+at ++ka  + ++ i++ l+ k  k l ++ +e+
  KHJ30434.1  82 YFLMRRSHDGYISATGMFKATFPYAAIIEENLERKYLKSLSSTSSEE 128
                 689***99*************66556655555555555555544444 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.38
      KilA-N  50 l 50 
                  
  KHJ30434.1 354 T 354
                 2 PP

>> hSH3  Helically-extended SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       1.6   1.5e+04      24      37 ..      27      40 ..      25      42 .. 0.81
   2 !   15.3   0.4   2.2e-06      0.02      16      80 ..     333     397 ..     323     406 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.6
        hSH3 24 askklggkdLpvkr 37
                a ++lg+ dL+v++
  KHJ30434.1 27 ARRRLGQTDLTVQT 40
                56899999*99986 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 2.2e-06
        hSH3  16 svtvdpnlaskklggkdLpvkrgeildviqktddkkvlcrneeGkygyvlrsalleedgeiYddi 80 
                 s t++p++ s k  g +L v++ e+l+v +k +++  + rn++ k+    +++   ++g+i  +i
  KHJ30434.1 333 SKTIIPSTFSLKNEGEELIVQTKEKLEVQEKVKSSSPISRNSKRKFDETEETYKDCQEGHINGNI 397
                 567889999999999*******************************9999999888888888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       602  (0.0335769); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 3233.37
//
Query:       KHJ30435.1  [L=353]
Description: putative mitotic checkpoint protein bub3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      4e-14   52.8   0.1      0.032   15.1   0.0    5.3  5  WD40         WD domain, G-beta repeat
     0.0059   16.9   0.0        2.7    8.3   0.0    4.0  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0099   15.5   0.0        3.2    7.3   0.0    2.4  3  CNH          CNH domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00017         1      12      38 .]      15      43 ..       5      43 .. 0.84
   2 !    4.8   0.0    0.0097        58       2      35 ..      52      85 ..      51      87 .. 0.86
   3 !   15.1   0.0   5.4e-06     0.032       5      38 .]      95     129 ..      93     129 .. 0.93
   4 !   12.3   0.0     4e-05      0.24      13      38 .]     260     285 ..     238     285 .. 0.79
   5 ?    3.0   0.0     0.036   2.2e+02      12      27 ..     301     316 ..     291     326 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00017
                S.EEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40 12 s.vtslafspdgaw.lasGsdDgtvriWd 38
                + ++slaf p+++  l+ +s+D++v+++d
  KHJ30435.1 15 DaISSLAFAPHSPTrLIVASWDKNVYLYD 43
                3499**********97779********98 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0097
                EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEE CS
        WD40  2 qclrtltGH.ssvtslafspdgawlasGsdDgtvr 35
                +++r+++ H  +v +++f  + +  ++G+ D  v+
  KHJ30435.1 52 KLIRKFE-HrAPVLDVCFGASDNEAFTGGVDFQVK 85
                7788885.9999*****9999999889**999887 PP

  == domain 3  score: 15.1 bits;  conditional E-value: 5.4e-06
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++l  H  +v s+ fs+++++l+s+s+D t++++d
  KHJ30435.1  95 TVLGSHeAPVKSVVFSKEKSLLFSASWDLTLHVYD 129
                 67889*999************************98 PP

  == domain 4  score: 12.3 bits;  conditional E-value: 4e-05
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 v+++ f+p    +asG+ Dg v +Wd
  KHJ30435.1 260 VNAVIFHPVYGTFASGGGDGIVALWD 285
                 999999999999****88*******9 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.036
                 SEEEEEEETTSSEEEE CS
        WD40  12 svtslafspdgawlas 27 
                 sv +l+fs dg++la 
  KHJ30435.1 301 SVAALSFSCDGNYLAI 316
                 588999*******974 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.077   4.6e+02      39      72 ..      15      49 ..       7      70 .. 0.75
   2 ?    0.7   0.0      0.11   6.7e+02      36      69 ..      99     132 ..      82     143 .. 0.87
   3 ?   -2.4   0.0         1   6.1e+03      53      71 ..     156     174 ..     152     193 .. 0.57
   4 !    8.3   0.0   0.00045       2.7      41      91 ..     260     309 ..     250     310 .. 0.88
   5 ?    4.0   0.0      0.01        62      39      60 ..     300     321 ..     294     341 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.077
  ANAPC4_WD40 39 sevrsLaWkpdg.klLavaysdgevrlldaesgkv 72
                   ++sLa+ p   + L va  d +v l+d ++++ 
   KHJ30435.1 15 DAISSLAFAPHSpTRLIVASWDKNVYLYDTSDQEA 49
                 57889999886536899999999****99876553 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.11
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaes 69 
                  +++  v+s+ ++++ +lL  a  d +++++d+ +
   KHJ30435.1  99 SHEAPVKSVVFSKEKSLLFSASWDLTLHVYDIDN 132
                  467889999*********9999999999999876 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 1
  ANAPC4_WD40  53 Lavaysdgevrlldaesgk 71 
                  L+va++   v++++ e  k
   KHJ30435.1 156 LVVAMASRLVHIYELEVIK 174
                  5666666556665555433 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.00045
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWge 91 
                  v+++ ++p    +a +  dg v l dae ++ +++++   ++ v+ l++++
   KHJ30435.1 260 VNAVIFHPVYGTFASGGGDGIVALWDAEAKRRIRQYQKYPQS-VAALSFSC 309
                  6777788888899***********************999985.99998875 PP

  == domain 5  score: 4.0 bits;  conditional E-value: 0.01
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdg 60 
                  ++v +L+++ dg+ La+a+  g
   KHJ30435.1 300 QSVAALSFSCDGNYLAIAVCPG 321
                  7899*************98665 PP

>> CNH  CNH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0   0.00053       3.2     100     150 ..      23      74 ..      10     106 .. 0.81
   2 !    5.7   0.0    0.0016       9.4     103     158 ..     110     163 ..      98     199 .. 0.74
   3 ?   -3.5   0.0         1   6.2e+03     140     160 ..     301     323 ..     284     328 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00053
         CNH 100 ngyskekfLvvavkskivllewneplkkfkkklrefqvpaevfsisvl..kpk 150
                 +++s  + +v++  +++ l+   ++  +  k++r+f++ a+v+++ +   +++
  KHJ30435.1  23 APHSPTRLIVASWDKNVYLYDTSDQEAQG-KLIRKFEHRAPVLDVCFGasDNE 74 
                 588999999999*************9999.************99987766444 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0016
         CNH 103 skekfLvvavks..kivllewneplkkfkkklrefqvpaevfsisvlkpklcvgvakg 158
                 skek L++++    +++++ +++ l++    ++e+ +pa ++s+s++ +kl+v++a+ 
  KHJ30435.1 110 SKEKSLLFSASWdlTLHVYDIDN-LSSG---VTEIILPAKPHSLSLTASKLVVAMASR 163
                 56666666666677888888887.4555...**********************99543 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 1
         CNH 140 evfsisvl..kpklcvgvakgFe 160
                 +v  +s+    ++l+++v+ gFe
  KHJ30435.1 301 SVAALSFScdGNYLAIAVCPGFE 323
                 33333333447777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       364  (0.0203023); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2774.76
//
Query:       KHJ30436.1  [L=709]
Description: putative chy zinc finger [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-23   82.9   1.6    1.1e-23   82.9   1.6    4.4  4  zinc_ribbon_6  Zinc-ribbon
    1.5e-20   73.5  19.1    1.5e-20   73.5  19.1    3.7  3  zf-CHY         CHY zinc finger
    1.4e-07   31.7   6.8    1.4e-07   31.7   6.8    5.7  5  zf-RING_2      Ring finger domain
    4.5e-05   23.2   6.4    4.5e-05   23.2   6.4    5.3  5  zf-C3HC4_2     Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
        6.5    7.3   9.4         26    5.4   0.5    4.1  4  Zn-C2H2_12     Autophagy receptor zinc finger-C2H2 domain


Domain annotation for each model (and alignments):
>> zinc_ribbon_6  Zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6   4.1         5   1.8e+04      46      58 ..     325     337 ..     317     341 .. 0.64
   2 ?   -3.8   2.0       3.8   1.4e+04      31      40 ..     372     381 ..     352     389 .. 0.65
   3 ?   -6.0   8.9         5   1.8e+04      31      55 ..     401     429 ..     393     431 .. 0.56
   4 !   82.9   1.6   3.2e-27   1.1e-23       2      59 .]     494     551 ..     493     551 .. 0.98

  Alignments for each domain:
  == domain 1  score: -4.6 bits;  conditional E-value: 5
  zinc_ribbon_6  46 lglkCkeCgSYNT 58 
                    + l+C+ C+ + T
     KHJ30436.1 325 VKLQCSACEKWYT 337
                    5567777765554 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 3.8
  zinc_ribbon_6  31 lCnDCekkse 40 
                    +C  C+k++ 
     KHJ30436.1 372 FCVECGKRTA 381
                    3555555554 PP

  == domain 3  score: -6.0 bits;  conditional E-value: 5
  zinc_ribbon_6  31 lCnDCekkse....vkfhvlglkCkeCgS 55 
                    +CnDC+   +     k  +   kC  C+S
     KHJ30436.1 401 HCNDCGICRKglgiGKDFFHCKKCGICMS 429
                    79999753332122233344556666666 PP

  == domain 4  score: 82.9 bits;  conditional E-value: 3.2e-27
  zinc_ribbon_6   2 dmeayfraldaeiaeqpmpeeyknkkvkilCnDCekksevkfhvlglkCkeCgSYNTr 59 
                    +me++fr+ld ++a+qpmp++++++k+ i+CnDC +ks v +h+lglkC+ C+SYNT+
     KHJ30436.1 494 NMETQFRNLDLAVASQPMPPQFRDTKALISCNDCCAKSAVTYHWLGLKCAICDSYNTT 551
                    8********************************************************5 PP

>> zf-CHY  CHY zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.5  19.1   4.1e-24   1.5e-20       1      75 []     318     391 ..     318     391 .. 0.99
   2 ?  -12.9  25.1         5   1.8e+04      11      74 ..     410     490 ..     395     491 .. 0.60
   3 ?   -2.2  11.7       1.7   6.1e+03      16      74 ..     479     547 ..     466     548 .. 0.61

  Alignments for each domain:
  == domain 1  score: 73.5 bits;  conditional E-value: 4.1e-24
      zf-CHY   1 CkHykravvairapcCkklyaCreCHeeledhelerlevkevlcllCeteqekavlCkkCkkefaeyfCpiCkll 75 
                 CkHykr+ v+++++ C+k+y+Cr CH+e edh l+r+++k++lc+lC ++q++ + C +C+k++a y+C+iCkl+
  KHJ30436.1 318 CKHYKRN-VKLQCSACEKWYTCRLCHDEAEDHVLDRKATKNMLCMLCGSAQKAGEFCVECGKRTAWYYCNICKLW 391
                 *******.****************************************************************985 PP

  == domain 2  score: -12.9 bits;  conditional E-value: 5
      zf-CHY  11 irapcCkklyaCreCH.....eeledhelerl.evkevlcllCeteqekavl......Ckk.....Ckk..efaeyfCpiCkl 74 
                   +   k++++C++C      +   +h+ +   +v+++ c  C +   ++ +      C++     C k    ++y+CpiC+ 
  KHJ30436.1 410 KGLGIGKDFFHCKKCGicmsmS--VEHSHKCIeRVSDCDCPICGEYMFSSPTpvvymlCGHgihkaCYKehLKTSYKCPICNK 490
                 5555668899999999887542..33433332145566788888764222221223347777777775543356789****85 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 1.7
      zf-CHY  16 CkklyaCreCHeeledhelerlevkevlcllCeteq....ekavlCkkC.kkefaey.....fCpiCkl 74 
                  k+ y+C  C +++++ e++  + +  ++++    q    ++ + C+ C  k++ +y     +C iC++
  KHJ30436.1 479 LKTSYKCPICNKSTKNMETQFRNLDLAVASQPMPPQfrdtKALISCNDCcAKSAVTYhwlglKCAICDS 547
                 5678*******8766555544444433333333222211245567*99835577788999988****86 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.2   8.0         5   1.8e+04      11      43 ..     322     363 ..     306     364 .. 0.58
   2 ?  -11.5  16.5         5   1.8e+04       3      44 .]     360     409 ..     336     409 .. 0.51
   3 ?   -8.1  15.2         5   1.8e+04       2      40 ..     404     438 ..     383     445 .. 0.62
   4 !   31.7   6.8     4e-11   1.4e-07       2      44 .]     446     489 ..     445     489 .. 0.84
   5 ?   -0.3   1.0      0.39   1.4e+03       2       9 ..     541     547 ..     516     555 .. 0.71

  Alignments for each domain:
  == domain 1  score: -5.2 bits;  conditional E-value: 5
   zf-RING_2  11 ssadsvlllpCgHv.fhreCl....erwlrssst....CPlC 43 
                 +++ ++++  C +   +r C     ++ l ++ t    C lC
  KHJ30436.1 322 KRNVKLQCSACEKWyTCRLCHdeaeDHVLDRKATknmlCMLC 363
                 444455555666664466666333333344444455667777 PP

  == domain 2  score: -11.5 bits;  conditional E-value: 5
   zf-RING_2   3 CpICleelssadsvlllpCgH...v.fhreCl......erwlrssstCPlCr 44 
                 C++C ++ +   + +++ Cg+     ++  C       ++ + +++ C +Cr
  KHJ30436.1 360 CMLCGSAQKA-GEFCVE-CGKrtaWyYCNICKlwdddpNKNIYHCNDCGICR 409
                 5566433333.333333.6654443355555333333222243444466665 PP

  == domain 3  score: -8.1 bits;  conditional E-value: 5
   zf-RING_2   2 eCpICleelssadsvlll.pCgHvfhreClerwlrssstC 40 
                 +C+IC + l  +++   + +Cg      C++  +++s++C
  KHJ30436.1 404 DCGICRKGLGIGKDFFHCkKCG-----ICMSMSVEHSHKC 438
                 5777777776666655222333.....2444444444444 PP

  == domain 4  score: 31.7 bits;  conditional E-value: 4e-11
   zf-RING_2   2 eCpIC.leelssadsvlllpCgHvfhreClerwlrssstCPlCr 44 
                 +CpIC    +ss+  v+ + CgH +h+ C +++l++s +CP+C+
  KHJ30436.1 446 DCPICgEYMFSSPTPVVYMLCGHGIHKACYKEHLKTSYKCPICN 489
                 7****445557777777666***********************5 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 0.39
   zf-RING_2   2 eCpIClee 9  
                 +C+IC ++
  KHJ30436.1 541 KCAIC-DS 547
                 57777.44 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.4   8.4         5   1.8e+04      21      31 ..     371     382 ..     337     390 .. 0.70
   2 ?    0.0   5.8      0.22   7.9e+02       2      37 ..     405     438 ..     404     440 .. 0.90
   3 !   23.2   6.4   1.3e-08   4.5e-05       2      40 .]     447     488 ..     446     488 .. 0.83
   4 ?   -3.9   0.9       3.8   1.4e+04      23      30 ..     524     531 ..     523     533 .. 0.82
   5 ?   -2.4   0.1       1.2   4.4e+03       1       5 [.     541     545 ..     541     551 .. 0.80

  Alignments for each domain:
  == domain 1  score: -6.4 bits;  conditional E-value: 5
  zf-C3HC4_2  21 vfCqkCilr.sL 31 
                  fC +C +r ++
  KHJ30436.1 371 EFCVECGKRtAW 382
                 478888777444 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.22
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLeekneC 37 
                 C iC   l  + + + C+   C  C+  s e++ +C
  KHJ30436.1 405 CGICRKGLGIGKDFFHCK--KCGICMSMSVEHSHKC 438
                 999999999999999997..7999999999999999 PP

  == domain 3  score: 23.2 bits;  conditional E-value: 1.3e-08
  zf-C3HC4_2   2 CpiCld.mlkdp..svvtpCgHvfCqkCilrsLeekneCPlC 40 
                 CpiC + m++ p  +v   CgH+ ++ C ++ L+ + +CP+C
  KHJ30436.1 447 CPICGEyMFSSPtpVVYMLCGHGIHKACYKEHLKTSYKCPIC 488
                 ****87466665115666************************ PP

  == domain 4  score: -3.9 bits;  conditional E-value: 3.8
  zf-C3HC4_2  23 CqkCilrs 30 
                 C++C ++s
  KHJ30436.1 524 CNDCCAKS 531
                 99999875 PP

  == domain 5  score: -2.4 bits;  conditional E-value: 1.2
  zf-C3HC4_2   1 kCpiC 5  
                 kC+iC
  KHJ30436.1 541 KCAIC 545
                 799*9 PP

>> Zn-C2H2_12  Autophagy receptor zinc finger-C2H2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0       0.2   7.3e+02      11      25 ..     140     154 ..     136     156 .. 0.83
   2 ?   -2.7   0.2       2.5   8.8e+03      15      23 ..     341     349 ..     332     350 .. 0.62
   3 ?    5.4   0.5    0.0073        26       3       9 ..     447     453 ..     446     459 .. 0.77
   4 ?    3.9   0.3     0.021        77       2       8 ..     484     490 ..     484     494 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.2
  Zn-C2H2_12  11 pknvdqdeFeeHVes 25 
                 +++++ ++  +HVe+
  KHJ30436.1 140 SPDTSTSAIIDHVEG 154
                 7899999999****8 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.5
  Zn-C2H2_12  15 dqdeFeeHV 23 
                   de e+HV
  KHJ30436.1 341 CHDEAEDHV 349
                 556779999 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.0073
  Zn-C2H2_12   3 CPlCseq 9  
                 CP+C+e+
  KHJ30436.1 447 CPICGEY 453
                 ****985 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.021
  Zn-C2H2_12   2 eCPlCse 8  
                 +CP+C +
  KHJ30436.1 484 KCPICNK 490
                 7****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (709 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1060  (0.0591221); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 4704.79
//
Query:       KHJ30437.1  [L=349]
Description: putative mitochondrial carrier protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.1e-40  136.0   8.9    4.6e-15   55.3   0.4    4.0  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.2     7e-19   1.3e-14       6      90 ..      37     114 ..      33     119 .. 0.91
   2 !   55.3   0.4   2.6e-19   4.6e-15      10      95 ..     150     251 ..     143     253 .. 0.86
   3 !   28.3   0.2   7.1e-11   1.3e-06       5      93 ..     261     344 ..     257     347 .. 0.85

  Alignments for each domain:
  == domain 1  score: 53.9 bits;  conditional E-value: 7e-19
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlk 90 
                 +++ +a++++ +++t++++Pld vKtr+qt + ++        +d+++++yk+eG rg+ rG+++ ll v++ + + f++y+  k
  KHJ30437.1  37 YRTEIAACIGSVISTFIAFPLDSVKTRMQTCQYKG-------YADCVRHTYKTEGYRGFIRGVVAPLLSVTIVRTVSFSIYQRSK 114
                 5666899***********************88886.......57*************************************9876 PP

  == domain 2  score: 55.3 bits;  conditional E-value: 2.6e-19
                 HHHHHHHHHHHHHHHHHHHHHHHHHH................CCCSSTTTSCSS.........HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHH CS
   Mito_carr  10 laGglagavatlvttPldvvKtrlqt................qkksskksksaa.........ildvlkkiykeeGlrglyrGllpnllrvapasalkf 83 
                 +aG++ag+v tl+ +P+++ K   q+                ++         +         ++ + k+i+k+ G++gly G+   llr +  +a +f
  KHJ30437.1 150 VAGATAGSVITLASCPFELTKLSAQVsnldvdmktgeykssdAR---------KiaatyqnkgTFMTAKNIIKNRGILGLYTGFHLHLLRDTLGTATYF 239
                 79************************999997766655555433.........1444555556999********************************* PP

                 HHHHHHHHHHCT CS
   Mito_carr  84 vlyetlkrlllk 95 
                 ++ye+ k++l++
  KHJ30437.1 240 MTYESAKQVLTT 251
                 ********9975 PP

  == domain 3  score: 28.3 bits;  conditional E-value: 7.1e-11
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 +l+ ++aGg++g++++ +++P+d +K   q ++ ++kk +    +   +    +   r +yrGl++++ r+   +++ f+++e++k+ +
  KHJ30437.1 261 PLAIIIAGGVCGIASWALIYPIDSAKSIYQKNSLTTKKGEP---V--PRPPRIQFRNRRMYRGLGVSMGRSCLVNSVFFSAFEFIKKNV 344
                 66779****************************99998663...2..233333455699***************************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2640.07
//
Query:       KHJ30438.1  [L=311]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.19   11.9   0.0       0.49   10.6   0.0    1.7  1  HupF_HypC  HupF/HypC family


Domain annotation for each model (and alignments):
>> HupF_HypC  HupF/HypC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   2.7e-05      0.49      31      63 ..     175     208 ..     163     209 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 2.7e-05
                 TTC.TTB-TT-EEEEETTEEEEEE-HHHHHHHHH CS
   HupF_HypC  31 alv.eevkvGdyVLvhvGfAiekideeeaeetle 63 
                 +l   ++++G   Lvh GfA++  +++  +++le
  KHJ30438.1 175 KLAiSPASIGRIKLVHTGFALSPCNDNARKKILE 208
                 3336779***************999988888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       564  (0.0314574); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.20s 00:00:00.66 Elapsed: 00:00:00.36
# Mc/sec: 2568.87
//
Query:       KHJ30439.1  [L=152]
Description: putative mitochondrial import receptor subunit tom22 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-49  166.2   3.4    3.9e-49  166.0   3.4    1.0  1  Tom22     Mitochondrial import receptor subunit Tom22


Domain annotation for each model (and alignments):
>> Tom22  Mitochondrial import receptor subunit Tom22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.0   3.4   2.2e-53   3.9e-49       1     137 [.       1     130 [.       1     131 [. 0.94

  Alignments for each domain:
  == domain 1  score: 166.0 bits;  conditional E-value: 2.2e-53
       Tom22   1 mVkltevedeefqeeqegeeeelaeededeadetdsdseissdedddfdvedEtlldRivALkDiippttRksissavstttslvkstlsfsGkllWvv 99 
                 mV+l evede++ ++qeg++     ++ed +++td+dseiss+++d+++ e+Etl+dR+ AL+Di+ppttR  iss+v++t++++ks l fsGk++Wvv
  KHJ30439.1   1 MVELIEVEDESMISKQEGSS-----DNED-DYYTDTDSEISSSDEDSIS-EEETLIDRLFALRDIVPPTTRFYISSKVESTSNWIKSSLVFSGKAIWVV 92 
                 9************9999988.....4444.468********88888886.9************************************************ PP

       Tom22 100 ttSaLLlGvPlaLaieeEqqlvemEkemklqksanell 137
                 +tS+LLlGvP+a+a++eEqq++emEkemk+++ + ell
  KHJ30439.1  93 STSVLLLGVPWAIAFAEEQQMMEMEKEMKMREIGGELL 130
                 ********************************999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       785  (0.0437838); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 1275.49
//
Query:       KHJ30440.1  [L=308]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.83    9.7   4.6          2    8.4   4.6    1.5  1  DUF1451   Zinc-ribbon containing domain


Domain annotation for each model (and alignments):
>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   4.6   0.00011         2     117     143 ..      95     121 ..      93     123 .. 0.95

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00011
     DUF1451 117 CekCgkelalkkteeippCpkCgateF 143
                 C++C+ ++  k+ +++p C +Cg+t++
  KHJ30440.1  95 CKRCNGHHPTKNCSRVPSCGNCGSTNY 121
                 ************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.19s 00:00:00.64 Elapsed: 00:00:00.35
# Mc/sec: 2661.74
//
Query:       KHJ30441.1  [L=401]
Description: putative duf2418 domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-28   99.3   0.2    3.6e-28   97.9   0.2    1.7  1  DUF2418   Protein of unknown function (DUF2418)


Domain annotation for each model (and alignments):
>> DUF2418  Protein of unknown function (DUF2418)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.9   0.2     2e-32   3.6e-28       4      96 .]     166     267 ..     163     267 .. 0.97

  Alignments for each domain:
  == domain 1  score: 97.9 bits;  conditional E-value: 2e-32
     DUF2418   4 weLsvWdpskfslrlftlFsPlhvlllvlll.........sesvlktlllvvllslqlylliskfeqqikDkkiiqkevleEYnekfVkPrlnvlvrdv 93 
                  e++vWdp   +lr+f+lFsP+hv++++l+          +  +lk+++l++l+slql ll  ++ q++kD +ii+ +v++EYn kfV+Prln++vrd 
  KHJ30441.1 166 SEIAVWDPILPCLRIFCLFSPGHVIIYWLFFpqnapdtqpALDILKVIFLQLLMSLQLFLLEIHYIQRAKDISIIHGNVMNEYNVKFVYPRLNPTVRDS 264
                 69***************************99*******99999******************************************************** PP

     DUF2418  94 avq 96 
                 ++q
  KHJ30441.1 265 GTQ 267
                 997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 3001.84
//
Query:       KHJ30442.1  [L=124]
Description: putative vacuolar atp synthase subunit f [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-32  111.4   0.0    2.3e-32  111.2   0.0    1.0  1  ATP-synt_F  ATP synthase (F/14-kDa) subunit


Domain annotation for each model (and alignments):
>> ATP-synt_F  ATP synthase (F/14-kDa) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.2   0.0   1.3e-36   2.3e-32       2      91 .]      15     118 ..      14     118 .. 0.98

  Alignments for each domain:
  == domain 1  score: 111.2 bits;  conditional E-value: 1.3e-36
                 EEEESHHHHHHHHHTTCEEEE..............CSSHHHHHHHHHHHHH.HTTEEEEEEEHHHHCCCHHHHHHCTCSSSSEEEEESCSCCGGSHHCH CS
  ATP-synt_F   2 avIGdedtvtgfrlaGvgeve..............vtdeeeieealkelle.redigiilitekiaeeirelideykeealPaileIPskegpydeekd 85 
                 a+IGded+vtg++laG+g+v+              +td+++ieea++++++ r+digi+li+++iae+ir+++d+y+  a+Pa+leIPsk+ pyd+ekd
  KHJ30442.1  15 AIIGDEDSVTGLLLAGIGHVTappdsqknflvvdsKTDNAAIEEAFDQFTShRKDIGIVLINQHIAERIRHRVDSYTA-AFPALLEIPSKDYPYDPEKD 112
                 8*************************************************99**************************.******************** PP

                 HHHHHH CS
  ATP-synt_F  86 svrkkv 91 
                 sv+++v
  KHJ30442.1 113 SVLRRV 118
                 ***997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 901.02
//
Query:       KHJ30443.1  [L=752]
Description: putative abc transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.7e-53  181.4  12.5    3.5e-53  181.0  12.5    1.1  1  ABC_membrane  ABC transporter transmembrane region
    4.9e-33  114.5   0.5    2.5e-32  112.3   0.0    2.4  3  ABC_tran      ABC transporter
    1.4e-05   24.6   0.0    8.4e-05   22.1   0.0    2.6  1  SMC_N         RecF/RecN/SMC N terminal domain
     0.0086   16.5   0.0      0.023   15.1   0.0    1.7  1  AAA_16        AAA ATPase domain
       0.01   16.1   0.2       0.13   12.6   0.2    2.4  1  AAA_22        AAA domain
  ------ inclusion threshold ------
       0.01   15.6   0.2      0.027   14.2   0.2    1.7  1  AAA_29        P-loop containing region of AAA domain
      0.077   13.4   0.0       0.67   10.4   0.0    2.3  1  AAA           ATPase family associated with various cellular 
       0.12   12.6   1.0        1.9    8.8   1.0    2.7  1  SbcCD_C       Putative exonuclease SbcCD, C subunit


Domain annotation for each model (and alignments):
>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.0  12.5   1.6e-56   3.5e-53       2     269 ..     180     450 ..     179     455 .. 0.98

  Alignments for each domain:
  == domain 1  score: 181.0 bits;  conditional E-value: 1.6e-56
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHHHS CS
  ABC_membrane   2 iliillailagvlsplfplvlgrildtlldkgdpet...ealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffdtn 95 
                    l++++++++  +s+++p+ +g+ild  +++++ +t    +  +++ +l l++ + +++++++  +l ++ger+++rlr+klf++ + q+ +ffd n
    KHJ30443.1 180 SLAFFFLLVSSSISMAIPFSIGKILDLATKNSEGNTlfeLNNQQFFGALGLILSIGAVANYGRILILRIVGERVISRLRSKLFRRTFVQDAEFFDAN 276
                   589***************************999999*999999****************************************************** PP

                   CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH CS
  ABC_membrane  96 svGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgirt 192
                   +vG+llsrl++d+  +  +++++l++ ++sl++  +gl+ m++++  l+ +l +i+p ++++++++++++++l++k q +++ ++++aeE l ++rt
    KHJ30443.1 277 RVGDLLSRLSSDTVIVGKSITQNLSDGLRSLVSGAAGLAAMVWVSLDLASILCVIFPPVAISAFIYGRMIRNLTRKIQRNLGTLTKIAEERLGNVRT 373
                   ************************************************************************************************* PP

                   HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHH CS
  ABC_membrane 193 VkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfai 269
                    +af++e +++ ++++++++    g+k a++++ +++++ ++g+  +++ l+ G+++v++g +++gdl+ fl++ a+
    KHJ30443.1 374 SQAFTAEVQEVGRYNHQIKKIFALGRKEAVISATFFTTSGFFGNMTILALLYSGGSMVKNGIITIGDLTSFLMYTAY 450
                   **************************************************************************987 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.2         2   4.6e+03      80      96 ..      84     100 ..      34     155 .. 0.53
   2 ?   -1.9   0.0         2   4.5e+03      84     120 ..     277     311 ..     252     319 .. 0.63
   3 !  112.3   0.0   1.1e-35   2.5e-32       2     137 .]     519     666 ..     518     666 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 2
                 HHHTCHHHHHHHSTTGG CS
                 xxxxxxxxxxxxxxxxx RF
    ABC_tran  80 esdeeiekalsklglke 96 
                  s+++i  + +k++lke
  KHJ30443.1  84 LSSNQIRSFYTKFQLKE 100
                 33333333333333333 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2
                 CHHHHHHHSTTGGTTCBGESTTS.GGS-HHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx RF
    ABC_tran  84 eiekalsklglkelkdtvvkssp.ssLSgGqkqrvala 120
                 ++ ++ls+l+ +     +v++s  ++LS G ++ v+ a
  KHJ30443.1 277 RVGDLLSRLSSDT---VIVGKSItQNLSDGLRSLVSGA 311
                 4555555555333...4454444599999999888755 PP

  == domain 3  score: 112.3 bits;  conditional E-value: 1.1e-35
                 EEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.......HHHTCHHHHHHHST CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxx RF
    ABC_tran   2 knvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.......esdeeiekalsklg 93 
                 +++++++  g+ +aivG++G GKSt+ +ll++ + pt+G i ++g+d+++ + +slr++ig + qep l +++ +++n       +s +ei +a++k +
  KHJ30443.1 519 DDLNFEIPSGSNIAIVGPSGGGKSTIGSLLLRFYLPTSGVISINGRDISSMNAKSLRRRIGLVGQEPVLMSGS-IADNiaygiphASHAEIVAAAKKAN 616
                 899**********************************************************************.99999*****977777777777777 PP

                 TGG......TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  94 lke......lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                  +         +t v+ ++++LSgGqkqr+a+arallk+p++l+lDE+t+
  KHJ30443.1 617 CNFisdfpdQLETQVGARGAQLSGGQKQRIAIARALLKNPDILILDEATS 666
                 7766676767789999999*****************************96 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   3.7e-08   8.4e-05     103     211 ..      69     709 ..      33     717 .. 0.94

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 3.7e-08
                 EETTSEEEEEETTEEE-HHHHHHHHHCTT-STT.................................................................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................................................................. RF
       SMC_N 103 vkrkgeseykingkevtkkevsellesagiske.................................................................. 135
                 +  + + ++ +n+++ ++++++++  + +++++                                                                  
  KHJ30443.1  69 ATIGLSDSFLLNKSKLSSNQIRSFYTKFQLKENykqdshhfenqqeksgpgedeevlfelqngfqrskkatqatqvnfsarlssqkslryssgfgeiwr 167
                 33344456999*******************999****************************************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
       SMC_N 136 ................................................................................................... 135
                                                                                                                    
  KHJ30443.1 168 lvkiarpeakwlslafffllvsssismaipfsigkildlatknsegntlfelnnqqffgalglilsigavanygrililrivgervisrlrsklfrrtf 266
                 *************************************************************************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
       SMC_N 136 ................................................................................................... 135
                                                                                                                    
  KHJ30443.1 267 vqdaeffdanrvgdllsrlssdtvivgksitqnlsdglrslvsgaaglaamvwvsldlasilcvifppvaisafiygrmirnltrkiqrnlgtltkiae 365
                 *************************************************************************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
       SMC_N 136 ................................................................................................... 135
                                                                                                                    
  KHJ30443.1 366 erlgnvrtsqaftaevqevgrynhqikkifalgrkeavisatffttsgffgnmtilallysggsmvkngiitigdltsflmytayagsslmglssfyse 464
                 *************************************************************************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
       SMC_N 136 ................................................................................................... 135
                                                                                                                    
  KHJ30443.1 465 lmkgvgaasrlfelqdrkpsicstlgtkvesakgiikfsnvrfayptrpavkifddlnfeipsgsniaivgpsgggkstigslllrfylptsgvising 563
                 *************************************************************************************************** PP

                 .........................................................................CS-HHHHHHHHHHHHHHHHCCS--SE CS
                 .........................................................................xxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 136 .........................................................................lLSgGektLvalaLlfAiqkvkpapl 161
                                                                                          +LSgG+k+ +a+a        k   +
  KHJ30443.1 564 rdissmnakslrrriglvgqepvlmsgsiadniaygiphashaeivaaakkancnfisdfpdqletqvgargaQLSGGQKQRIAIARA----LLKNPDI 658
                 *********************************************************************************8888744....3556679 PP

                 EEECTTTTTS-HHHHHHHHHHHH.HHCTTSEEEEE-SSHHHCCC-SCEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 162 yllDeidaaLDeknvkkvaellk.eksknaQfivislreemlekadklvgv 211
                  +lDe  +aLD++  + v + l    + +   i i++r  +++++d+++ +
  KHJ30443.1 659 LILDEATSALDAESETLVNSALAvLLRGHNTTISIAHRLSTIKRSDHIIVL 709
                 9**************999999984455567889999999999999988755 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0     1e-05     0.023      23     154 ..     527     675 ..     517     692 .. 0.56

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1e-05
      AAA_16  23 rpelvllsGesGvGKsslvrellralekd.ggiflrgkcdqlesaipysalaqalareellrqllde..............................ae 90 
                 +++++ ++G+sG GKs++   llr +  + g+i ++g+  ++       + a+ l r + +  +++e                              a+
  KHJ30443.1 527 SGSNIAIVGPSGGGKSTIGSLLLRFYLPTsGVISINGRDISS-------MNAKSL-R-RRIGLVGQEpvlmsgsiadniaygiphashaeivaaakkAN 616
                 45899******************9666661455566666666.......344455.4.55555555544444444444333333333333333333233 PP

      AAA_16  91 saeleawrekleeala.avpelagaeasrllellkrllallsrderplvlvlDdlq.wadeaslql 154
                  +  ++++++le++++  +++l+g +++r++ +  r+l  l++   p +l+lD++   +d++s +l
  KHJ30443.1 617 CNFISDFPDQLETQVGaRGAQLSGGQKQRIAIA--RAL--LKN---PDILILDEATsALDAESETL 675
                 334444444444444444444444444444433..333..333...66888888874445555555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.2   5.6e-05      0.13       6     105 ..     529     672 ..     526     694 .. 0.57

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 5.6e-05
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeakaee............................................erpevvfvtlpsstsskdllrel 60 
                 + ++++G+sG GK+t    ll+ +                                                    ++++ +++ +++++   ++ +++
  KHJ30443.1 529 SNIAIVGPSGGGKSTIGSLLLRFYLPT----SgvisingrdissmnakslrrriglvgqepvlmsgsiadniaygiPHASHAEIVAAAKKANCNFISDF 623
                 6799******************99643....13333555666666666655555555555555555555555555544444444444444444444444 PP

      AAA_22  61 lralglelkaerlsseell.ealeqalrarav...ielliiDEaqh.lr..s 105
                   +l+ +  a   +  +l   + ++ + ara    + +li+DEa   l+  s
  KHJ30443.1 624 PDQLETQVGA---RGAQLSgGQKQRIAIARALlknPDILILDEATSaLDaeS 672
                 4444444444...444444455555555555566677888888887674433 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.2   1.2e-05     0.027      12      38 ..     518     544 ..     516     547 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.2e-05
      AAA_29  12 fdghtieidlkg.atlltGpsGsGKSTl 38 
                 fd+  +ei  +g ++ ++GpsG GKST+
  KHJ30443.1 518 FDDLNFEIP-SGsNIAIVGPSGGGKSTI 544
                 788889997.555**************8 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0    0.0003      0.67       3      92 ..     533     683 ..     531     710 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.0003
                 EESSTTSSHHHHHHHHHHHH..THEEEEEETTTCSSS.............................................................. CS
         AAA   3 lyGppGtGKTllakavakel..gvefleisgsellsk.............................................................. 37 
                 ++Gp G GK+++ + + +     + +++i+g ++ s+                                                              
  KHJ30443.1 533 IVGPSGGGKSTIGSLLLRFYlpTSGVISINGRDISSMnakslrrriglvgqepvlmsgsiadniaygiphashaeivaaakkancnfisdfpdqletqv 631
                 789*********999999965546677777777776677777778999999999999999999999999999999999999999999999999999977 PP

                 ....STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHH CS
         AAA  38 ....yvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlte 92 
                      +  + +k r  +++a  k+ p il++DE+ +   ++      +e+ v ++L   
  KHJ30443.1 632 gargAQLSGGQKQRIAIARALLKN-PDILILDEATSALDAE------SETLVNSALAVL 683
                 766655555555566665555555.9********9999888......333333333333 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   1.0   0.00084       1.9      28      81 ..     633     673 ..     619     681 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00084
     SbcCD_C  28 rssgtlSGGekqflaylalaaalaalyssaegrepalrlvfLDEAFsklDeesi 81 
                 ++ ++lSGG+kq +   a+a   +al+       +++++++LDEA s lD+es 
  KHJ30443.1 633 ARGAQLSGGQKQRI---AIA---RALL-------KNPDILILDEATSALDAESE 673
                 56667777777432...233...2222.......3489************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (752 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.71u 0.30s 00:00:01.01 Elapsed: 00:00:00.45
# Mc/sec: 5041.34
//
Query:       KHJ30444.1  [L=499]
Description: putative hsp90 co-chaperone cdc37 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-44  152.5   2.3    1.1e-44  152.5   2.3    3.3  4  CDC37_N    Cdc37 N terminal kinase binding
    3.7e-38  130.1   0.3    2.4e-37  127.5   0.0    2.4  2  CDC37_M    Cdc37 Hsp90 binding domain
    1.1e-33  115.3   4.0      5e-33  113.2   4.0    2.1  1  CDC37_C    Cdc37 C terminal domain
  ------ inclusion threshold ------
      0.089   13.1   0.5      0.089   13.1   0.5    2.6  2  DUF4164    Domain of unknown function (DUF4164)
       0.15   11.8   2.2       0.37   10.5   0.6    2.4  3  RPW8       Arabidopsis broad-spectrum mildew resistance prote
       0.28   11.6   7.4       0.47   10.9   0.1    3.3  3  PPV_E1_N   E1 Protein, N terminal domain
        2.2    8.5   7.6       0.17   12.0   1.5    2.3  2  Fib_alpha  Fibrinogen alpha/beta chain family
        4.7    6.5  12.7          3    7.1   0.1    3.3  3  DUF4407    Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> CDC37_N  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.5   2.3   4.9e-48   1.1e-44       1     129 []       2     138 ..       2     138 .. 0.90
   2 ?    0.3   0.3      0.55   1.2e+03      48      87 ..     149     186 ..     139     225 .. 0.46
   3 ?   -2.6   0.0       4.4   9.8e+03      30      44 ..     352     366 ..     336     378 .. 0.70
   4 ?   -0.5   0.2      0.98   2.2e+03      58      86 ..     460     489 ..     396     498 .. 0.59

  Alignments for each domain:
  == domain 1  score: 152.5 bits;  conditional E-value: 4.9e-48
     CDC37_N   1 pldYskWDklELSDDsDievHPNVDkrsfirwKqrdihekreqrkaeikklklereindkllkridkllealkekevee....eevvfkalnesleekk 95 
                 p+dYskWD+lELSDDsDievHPNVDk+sfir+Kq++ih++r +rk++i+++k+er+ind+ lkri++ll a++++++e+    +e++f++ +es+ + +
  KHJ30444.1   2 PVDYSKWDNLELSDDSDIEVHPNVDKKSFIRAKQNQIHQRRIERKNKIETYKYERAINDGFLKRIKELLVAFQSHSTESvqnpDELIFQVATESVLKGN 100
                 79***************************************************************************999999999*****99994444 PP

     CDC37_N  96 ekedkpkaek......eeeqptydemleklldqvkkelke 129
                   ++kp+ ++      e+e p+y+ ml+ l+d++kk+++e
  KHJ30444.1 101 --DEKPPRPPpcvntnENEIPSYSSMLAVLIDRIKKKIDE 138
                 ..444444434567756889****************9985 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.55
     CDC37_N  48 ikklklereindkllkridkllealkekevee..eevvfkal 87 
                 i++lk++++  ++l+k+++  l++l+++++++  +    ++ 
  KHJ30444.1 149 ISELKSHVNEVENLQKKLEVELDTLETEASKTitS----ESY 186
                 44555554444444444444444444444443221....222 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 4.4
     CDC37_N  30 irwKqrdihekreqr 44 
                 i+ + ++i ++r+q+
  KHJ30444.1 352 IKSRAKEIQNQRAQE 366
                 455555666666654 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.98
     CDC37_N  58 ndkllkridkllealkekevee.eevvfka 86 
                  d+ +++ +k l+ ++e+e ++ ee+ +k+
  KHJ30444.1 460 IDTTTEEGQKALKLFQEQERAAkEEKLAKE 489
                 222222222222222222222212333333 PP

>> CDC37_M  Cdc37 Hsp90 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.81   1.8e+03      79     107 ..     128     158 ..     117     167 .. 0.61
   2 !  127.5   0.0   1.1e-40   2.4e-37       1     117 [.     255     364 ..     255     365 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.81
     CDC37_M  79 Ffkkiktk.shqa.kklFledveetynrikt 107
                  +++ik+k ++++ ++ F+  ++e  +++++
  KHJ30444.1 128 LIDRIKKKiDEEKsSDRFNAYISELKSHVNE 158
                 5566633312222366777777777777754 PP

  == domain 2  score: 127.5 bits;  conditional E-value: 1.1e-40
     CDC37_M   1 kFakiklgdykkseefllkhpeilseqqkdaLlmeafdaqlegkekkakqvvhqslllqyireLaklnkeglknviklFfkkiktkshqakklFledve 99 
                 +F++i+++dy+++ +f++ hp++++e+++d+Ll+ af+  +++++++a+++vh++lllqy+r L      g+ +++ +Ffk+i+t+ hqa+k+F +dv+
  KHJ30444.1 255 EFSQINIKDYRAALQFISTHPDVVAEKETDGLLVMAFNFCINNEDDNARRCVHHGLLLQYCRAL------GP-DGVGIFFKRITTPGHQAQKVFYDDVN 346
                 7***************************************************************......99.************************** PP

     CDC37_M 100 etynriktRakiikkeqe 117
                 +t+ rik+Rak+i+++++
  KHJ30444.1 347 STFTRIKSRAKEIQNQRA 364
                 **************9886 PP

>> CDC37_C  Cdc37 C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.2   4.0   2.2e-36     5e-33       2      96 ..     392     485 ..     391     490 .. 0.94

  Alignments for each domain:
  == domain 1  score: 113.2 bits;  conditional E-value: 2.2e-36
     CDC37_C   2 lPdadsedpeeqkkvevFeklppelqkAlktksLdevnkvlakmkveeAeeilellgeagilsleellvdatteegekelkeleeekkekkkeee 96 
                 +P  +se+p+e++++++Fe++p +lqkAl+++sLdevnkvl+km+veeAeei+ +lge+g+lslee+++d tteeg+k lk  +e+++ +k+e +
  KHJ30444.1 392 IPSLNSENPSEVEARKIFESFPDDLQKALESGSLDEVNKVLGKMNVEEAEEIVGKLGEGGMLSLEEQIIDTTTEEGQKALKLFQEQERAAKEE-K 485
                 89***********************************************************************************99865544.3 PP

>> DUF4164  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.5     4e-05     0.089       4      64 ..     116     179 ..     113     184 .. 0.85
   2 ?   -0.9   0.7       0.9     2e+03      48      73 ..     466     491 ..     437     496 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4e-05
     DUF4164   4 keleaaltrLeaaldsLEkavdrrleaerkr...deleaeiealgedrsRLaeeLdqaearaar 64 
                 +e+ ++ + L   +d++ k +d+  +++r +   +el++ ++++++ +++L+ eLd  e +a++
  KHJ30444.1 116 NEIPSYSSMLAVLIDRIKKKIDEEKSSDRFNayiSELKSHVNEVENLQKKLEVELDTLETEASK 179
                 5666677777788888889999888888887899***********************9998875 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.9
     DUF4164  48 rsRLaeeLdqaearaarleevnrEvs 73 
                 + + a +L q + raa+ e++++E+ 
  KHJ30444.1 466 EGQKALKLFQEQERAAKEEKLAKELE 491
                 44445555666666666666666654 PP

>> RPW8  Arabidopsis broad-spectrum mildew resistance protein RPW8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.6   0.00016      0.37      15      61 ..     123     169 ..     120     180 .. 0.89
   2 ?   -2.1   0.0       1.3   2.9e+03      34      53 ..     342     361 ..     329     369 .. 0.77
   3 ?   -3.2   0.0       2.7   6.1e+03      62      81 ..     426     446 ..     409     451 .. 0.54

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00016
        RPW8  15 ellkaileakkksldfksilkrLestleritPvvkeieklnkeldrp 61 
                 ++l ++++  kk  d + +++r ++ +++++  v+e+e+l+k+l+ +
  KHJ30444.1 123 SMLAVLIDRIKKKIDEEKSSDRFNAYISELKSHVNEVENLQKKLEVE 169
                 6789999***********************************99765 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.3
        RPW8  34 lkrLestleritPvvkeiek 53 
                  ++ +st +ri+   kei++
  KHJ30444.1 342 YDDVNSTFTRIKSRAKEIQN 361
                 57788899999988888876 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 2.7
        RPW8  62 reeieeL.kklLekaekLVek 81 
                 +e+ + L k   e+ae++V k
  KHJ30444.1 426 DEVNKVLgKMNVEEAEEIVGK 446
                 233333322245666666654 PP

>> PPV_E1_N  E1 Protein, N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1      0.14   3.1e+02      31      77 ..     116     166 ..     108     173 .. 0.72
   2 ?    1.0   0.5      0.24   5.4e+02      35      71 ..     231     269 ..     206     273 .. 0.67
   3 ?   10.9   0.1   0.00021      0.47      41      82 ..     457     499 .]     434     499 .] 0.83

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.14
    PPV_E1_N  31 deesendsevedLvDdasvv..qgnslelfqa..qeaeesekalqvLKRKy 77 
                 +e  ++ s +  L+D  +++  +++s + f+a   e + + +++++L++K+
  KHJ30444.1 116 NEIPSYSSMLAVLIDRIKKKidEEKSSDRFNAyiSELKSHVNEVENLQKKL 166
                 3333677777889987655544999*****9722567889999*9999997 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.24
    PPV_E1_N  35 endsev.edLv.Ddasvvqgnslelfqaqeaeesekalq 71 
                 + d  v e+ v Dd++v+     ++f++ + ++++ alq
  KHJ30444.1 231 QTDTGVgESSVdDDDDVEASDVAKEFSQINIKDYRAALQ 269
                 444445677773444555666667899999999998887 PP

  == domain 3  score: 10.9 bits;  conditional E-value: 0.00021
    PPV_E1_N  41 edLvDdasvvqgnslelfqaqeaeesekal.qvLKRKylkSPk 82 
                 e+++D ++ + +++l+lfq+qe+  +e++l ++L  Ky + P+
  KHJ30444.1 457 EQIIDTTTEEGQKALKLFQEQERAAKEEKLaKELEEKYADEPE 499
                 7899******************98887776268*****99985 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.5   7.7e-05      0.17      74     131 ..     106     176 ..      52     183 .. 0.69
   2 ?   -3.8   0.2         6   1.4e+04      70      86 ..     472     490 ..     455     495 .. 0.39

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 7.7e-05
                 H.......HHHHHHHHHHHHHHCCCHHHHHHHCCHHH......HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  74 d.......ndnvikksskeleeeilrlketidaqesn......irvLqnvlesneqkiqkLeqdidqkerk 131
                         n+n i ++s++l   i r+k++id++ s+      i +L++ +++ e+  +kLe++ d++e +
  KHJ30444.1 106 RpppcvntNENEIPSYSSMLAVLIDRIKKKIDEEKSSdrfnayISELKSHVNEVENLQKKLEVELDTLETE 176
                 255555558***********************987543455559999999999999999999999998865 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 6
                 HHHHHH..HHHHHHHHHHH CS
   Fib_alpha  70 kskkdn..dnvikksskel 86 
                 k  +++      +k++kel
  KHJ30444.1 472 KLFQEQerAAKEEKLAKEL 490
                 3333331122222333344 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.1    0.0013         3     208     251 ..      27      70 ..       9      88 .. 0.83
   2 ?    4.9   0.2    0.0062        14     113     171 ..     129     185 ..     122     259 .. 0.70
   3 ?   -0.2   3.2      0.23     5e+02     107     226 ..     427     494 ..     334     499 .] 0.58

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0013
     DUF4407 208 atarlaalraelaeleaerakeraasqaaaaaddGllarleald 251
                 +++ + a+++++ + + er++++++ + ++a +dG+l+r++ l 
  KHJ30444.1  27 KKSFIRAKQNQIHQRRIERKNKIETYKYERAINDGFLKRIKELL 70 
                 56668899********************************9864 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0062
     DUF4407 113 aeeqqeeakelkeqlaaaltaelaeleaqiaalqaeidaaearldalraeaqkeldgtk 171
                 +++ +++++e k++ +  ++a ++el++ +++ ++  +++e +ld+l++ea k ++ ++
  KHJ30444.1 129 IDRIKKKIDEEKSSDR--FNAYISELKSHVNEVENLQKKLEVELDTLETEASKTITSES 185
                 4444444444444433..66666666666666666666666666666666666666544 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.23
     DUF4407 107 eIdaelaeeqqeeakelkeqlaaaltaelaeleaqiaalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkak 205
                 e++++l +++ eea+e+  +l +                                                           ++ +d+ ++e +++ + 
  KHJ30444.1 427 EVNKVLGKMNVEEAEEIVGKLGEG----------------------------------------------------GMLSLEEQIIDTTTEEGQKALKL 473
                 444444444445555544444444....................................................44444444444444444444444 PP

     DUF4407 206 ldatarlaalraelaeleaer 226
                  ++++r a+ ++ ++ele+++
  KHJ30444.1 474 FQEQERAAKEEKLAKELEEKY 494
                 444444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1688  (0.0941491); expected 358.6 (0.02)
Passed bias filter:                      713  (0.039768); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 3478.29
//
Query:       KHJ30445.1  [L=242]
Description: putative clathrin light chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-73  248.1   3.2    1.2e-73  248.0   3.2    1.0  1  Clathrin_lg_ch  Clathrin light chain
  ------ inclusion threshold ------
       0.13   12.1   0.3        0.4   10.5   0.2    1.7  2  IL31            Interleukin 31
       0.36   11.4   4.6       0.62   10.6   4.6    1.3  1  TipAS           TipAS antibiotic-recognition domain


Domain annotation for each model (and alignments):
>> Clathrin_lg_ch  Clathrin light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.0   3.2     2e-77   1.2e-73       1     230 []       1     239 [.       1     239 [. 0.90

  Alignments for each domain:
  == domain 1  score: 248.0 bits;  conditional E-value: 2e-77
  Clathrin_lg_ch   1 maDkFpsle...degaeteasaaaeedpaadFLarekaelgdda.qfateqdeealleaeeeeddllgaa..aangeedeeidefesqfpaieaa 89 
                     maD+Fpsle   +++ ++++ ++   ++++dFL+reka+lgdda qf+t++d  a++ +  e++  lg++  + +g  dee+++f s+fpai+  
      KHJ30445.1   1 MADRFPSLEefdTAQIDAPSVSSFGPASTDDFLSREKALLGDDAnQFTTQNDMMAFVPE--ENNVILGEGfpTIQGGGDEELSAFTSSFPAIDVR 93 
                     9********77433355556667778899***********************9998433..34555555577555568***************** PP

  Clathrin_lg_ch  90 deqvapegtites..eess..saeeeeeeepesirkWReerkkeieerdeasekkkeetkekAkkeiddfyenynekkektkaqnrkeeeeflke 180
                     ++++a+++tit++  +     +++ ee eepe i+kWRe+r++ i+er+++se++k+et++ A+++id+fyenyn+kkek +aq+r+e+eefl+ 
      KHJ30445.1  94 NNNIAHTETITDKpeS--YkpQSHPEELEEPEIIKKWREQRNLTISERAARSEERKQETIKSAQQNIDEFYENYNTKKEKGIAQTRREAEEFLAA 186
                     ***********99643..4359999********************************************************************** PP

  Clathrin_lg_ch 181 rddtspgGteWeRvakLvdfnpkss...ksgkdksRfrelLlsLKqdekaPga 230
                     r+dts+gGt+WeR+akLvd+++k+    +sg+dk Rfr+lL+sLK+d +aPga
      KHJ30445.1 187 REDTSAGGTSWERIAKLVDLSGKGVrggASGTDKARFRDLLISLKKDPNAPGA 239
                     *************************9*************************97 PP

>> IL31  Interleukin 31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.34     2e+03      63      99 ..      81     117 ..      76     121 .. 0.81
   2 ?   10.5   0.2   6.6e-05       0.4       8      43 ..     141     177 ..     134     189 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.34
        IL31  63 sailaylkaikplldnksdideiieqLkklklqnepe 99 
                 sa  + + ai    +n +++++i+++ +  k q +pe
  KHJ30445.1  81 SAFTSSFPAIDVRNNNIAHTETITDKPESYKPQSHPE 117
                 6777888899999999999999999888877777665 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 6.6e-05
        IL31   8 rpskedlkkiikeLkslskklledyekke.kGvsese 43 
                  +s+e  +++ik  +++  + +e+y+ k+ kG+ +  
  KHJ30445.1 141 ARSEERKQETIKSAQQNIDEFYENYNTKKeKGIAQTR 177
                 56888899*****************96655**98765 PP

>> TipAS  TipAS antibiotic-recognition domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   4.6    0.0001      0.62       3      62 ..     122     183 ..     121     198 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.0001
                 -HHHHH--XXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXX CS
       TipAS   3 kearerygdea..ayqeseekiaklskedweelkaelkelfaklaaalaagkdpdseeaqel 62 
                  e+++++ ++    ++e +++ +++++e ++ +++  +e++++ +   ++g + +  ea e 
  KHJ30445.1 122 PEIIKKWREQRnlTISERAARSEERKQETIKSAQQNIDEFYENYNTKKEKGIAQTRREAEEF 183
                 699******8867888888999******************************9999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1554  (0.0866752); expected 358.6 (0.02)
Passed bias filter:                      732  (0.0408277); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 1759.04
//
Query:       KHJ30446.1  [L=267]
Description: hypothetical protein EV44_g3710 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0031   16.5   8.6     0.0056   15.7   8.6    1.3  1  IFT57           Intra-flagellar transport protein 57
     0.0035   17.8  10.1     0.0061   17.0  10.1    1.3  1  Fez1            Fez1
     0.0038   16.8   5.1     0.0075   15.8   5.1    1.5  1  Vps5            Vps5 C terminal like
     0.0061   16.8   7.4     0.0061   16.8   7.4    2.0  1  CENP-Q          CENP-Q, a CENPA-CAD centromere complex subuni
  ------ inclusion threshold ------
      0.038   12.6   7.9      0.048   12.3   7.9    1.1  1  AAA_13          AAA domain
      0.046   14.2  12.9       0.87   10.1   0.3    3.4  3  NPV_P10         Nucleopolyhedrovirus P10 protein
      0.052   13.9   8.0      0.091   13.1   8.0    1.6  1  Uso1_p115_C     Uso1 / p115 like vesicle tethering protein, C
      0.057   13.0  10.8       0.45   10.1   4.0    2.2  2  Filament        Intermediate filament protein
       0.06   13.1   0.4       0.23   11.3   0.1    2.1  2  TRAF_BIRC3_bd   TNF receptor-associated factor BIRC3 binding 
      0.077   13.3   3.3          5    7.5   0.2    2.7  3  ABC_tran_CTD    ABC transporter C-terminal domain
       0.08   11.8  11.6        0.2   10.5  11.6    1.6  1  Spc7            Spc7 kinetochore protein
      0.098   12.2   6.5       0.14   11.7   6.5    1.3  1  Exonuc_VII_L    Exonuclease VII, large subunit
       0.11   11.4   0.3       0.15   10.9   0.3    1.3  1  RTBV_P46        Rice tungro bacilliform virus P46 protein
       0.12   12.7   2.1       0.24   11.7   2.1    1.8  1  FCH             Fes/CIP4, and EFC/F-BAR homology domain
       0.13   12.5   9.6      0.033   14.4   6.5    1.6  1  Jnk-SapK_ap_N   JNK_SAPK-associated protein-1
       0.18   11.1   9.5      0.074   12.4   3.8    2.0  2  FAM76           FAM76 protein
       0.23   12.1   9.3        5.3    7.7   0.1    2.6  2  SlyX            SlyX
       0.27   11.3   9.8       0.34   11.0   2.9    2.5  2  DHR10           Designed helical repeat protein 10 domain
       0.28   11.3  10.8       0.86    9.7   5.9    2.4  2  BRE1            BRE1 E3 ubiquitin ligase
       0.31   11.1   5.6       0.38   10.8   1.7    2.2  2  DUF1664         Protein of unknown function (DUF1664)
       0.34   11.2   6.1       0.41   11.0   1.9    2.5  2  DUF4164         Domain of unknown function (DUF4164)
       0.51   11.1   8.4       0.39   11.5   2.2    2.5  2  DUF4472         Domain of unknown function (DUF4472)
       0.54    9.4   4.5        0.9    8.7   4.5    1.4  1  TMPIT           TMPIT-like protein
       0.87    9.8   8.5        3.5    7.9   3.8    2.3  2  TMF_TATA_bd     TATA element modulatory factor 1 TATA binding
        1.1    9.8   8.6        2.5    8.6   0.6    2.9  2  DUF4140         N-terminal domain of unknown function (DUF414
        1.5    9.0   7.9          2    8.6   0.3    2.8  2  Swi5            Swi5
        1.5    8.1  11.7         32    3.8  11.7    2.2  1  DUF4407         Domain of unknown function (DUF4407)
        1.7    8.5  12.2        1.5    8.6   2.3    2.8  2  DivIC           Septum formation initiator
          2    6.3   8.5        3.2    5.6   8.5    1.2  1  Prominin        Prominin
        2.1    8.4   9.4         10    6.2   0.6    2.4  2  TMF_DNA_bd      TATA element modulatory factor 1 DNA binding
          3    8.3  16.9        1.6    9.2   1.4    3.7  2  LPP             Lipoprotein leucine-zipper
        3.6    8.3   6.3        5.6    7.7   0.7    2.5  2  YabA            Initiation control protein YabA
        3.7    7.3  11.4        4.4    7.0   4.8    2.3  2  Lectin_N        Hepatic lectin, N-terminal domain
        4.4    7.8  13.2        1.2    9.7   2.9    2.7  2  APG6_N          Apg6 coiled-coil region
        5.6    7.3  11.8        5.7    7.2   5.5    2.4  2  Spc24           Spc24 subunit of Ndc80


Domain annotation for each model (and alignments):
>> IFT57  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   8.6   1.1e-05    0.0056     228     332 ..      22     128 ..      17     136 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.1e-05
       IFT57 228 qmkkhkksieeslpetksqlkklhedisktlekiesrEkylnsqleellqeyreaqeelsevkekykqlsegvseltrelaeiseelekvkqeme..er 324
                 +++   ++ ++ l++t++q+++l  d++++ +++ + E+   +ql+++l++  +++ els+v+ + +  ++++ +l+++ + ++ + +k+  e++   +
  KHJ30446.1  22 SCNLKVTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTYSQQLNSNLTQITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKLRAELNlnVK 120
                 5555556778899***********************************************************************999998887642266 PP

       IFT57 325 gssmtDgs 332
                  ++ tD+s
  KHJ30446.1 121 PAKSTDSS 128
                 66667665 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0  10.1   1.2e-05    0.0061      14     146 ..      15     156 ..      12     167 .. 0.73

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.2e-05
        Fez1  14 lLKqQLkdsqaevtqklseivalkaqlrelrakleekeeeikeleesleektle....levcenelqrk.......kseaellrekvekleeelkelre 101
                 +LK+QL  +   vt+  s + + + q+ +l+a+l +  +++ +le++++++ ++    +  +++el++        +++   l++kv++l+++ ++lr 
  KHJ30446.1  15 ILKEQLSSCNLKVTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTYSQQLNSnltqITSLNSELSKVnlhrsadNDKIAALNDKVSALQADKNKLRA 113
                 79****************999**********************99998887766555567777777777666667777888899999999999999999 PP

        Fez1 102 elselsleeeeaalesdeakaqrqeaeeleelkreverlraeLke 146
                 el+ + + ++++ ++ ++ +  r++ ++ ++  ++++  +++L++
  KHJ30446.1 114 ELNLNVKPAKSTDSSDTRPRRTRSDPDKFSA--SQLNTEKRQLAY 156
                 9988665555544444443444444333333..333444444444 PP

>> Vps5  Vps5 C terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   5.1   1.5e-05    0.0075       8     100 ..      16     107 ..       9     118 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.5e-05
        Vps5   8 ltssisksstkfeEqDewFedkkqeldslesqLkkLykaiellvsq.rkelasataelakslesLaslelskslsralsqlaeveerikeller 100
                 l + +s+   k++E+D+ +++ +q++++l++ L + ++ + +l++   ++l s++ ++++  ++L++++l++s     +++a ++ +++ l+++
  KHJ30446.1  16 LKEQLSSCNLKVTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTySQQLNSNLTQITSLNSELSKVNLHRSA--DNDKIAALNDKVSALQAD 107
                 5566777788****************************999998762789*******************99753..445566666666555554 PP

>> CENP-Q  CENP-Q, a CENPA-CAD centromere complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   7.4   1.2e-05    0.0061      28     110 ..      53     134 ..      47     158 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.2e-05
      CENP-Q  28 eklldekaaleaqLspelhslelLeaeiekeeralerdyeaLreLeknakaearerke.klkkehvllqesdseelslleassd 110
                  +l++  + +++qL+ +l ++  L +e++k+      d  +++ L  +++a+++  ++ +++  +++ +   ++++s ++ +  
  KHJ30446.1  53 QQLVNLEQTYSQQLNSNLTQITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKlRAELNLNVKP--AKSTDSSDTRPRR 134
                 689***************************************************966646666555555..3333333333333 PP

>> AAA_13  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   7.9   9.4e-05     0.048     308     404 ..      26     120 ..       8     165 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 9.4e-05
      AAA_13 308 avsdeasensafeedkeelkaeaealeeqLkglqraleaKrkepfksvelesvkakiesikklvaeineliakhNekvanleeekeeakkklelhlv 404
                 +v++++s  s++++++ +l+a +    +qL +l++  ++  +   +  +++s+++++++++   ++ n+ ia+ N kv+ l+++k++++ +l l + 
  KHJ30446.1  26 KVTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTYSQQLNSNLT--QITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKLRAELNLNVK 120
                 67788999999****************************9977666..8999****************************************99663 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.1      0.27   1.4e+02      42      66 ..      11      35 ..       6      38 .. 0.87
   2 ?    5.2   6.5     0.059        30      13      64 ..      27      76 ..      20      86 .. 0.49
   3 ?   10.1   0.3    0.0017      0.87      11      35 ..      92     116 ..      90     123 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.27
     NPV_P10 42 ekLdaqsaqLaeletkvenIqdiLn 66
                +k+  + +qL + + kv++ +++L+
  KHJ30446.1 11 SKFGILKEQLSSCNLKVTETDSVLS 35
                6888899*****************8 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.059
     NPV_P10 13 ikavddkVdalqqqvddvqenlpdvtelnekLda.qsaqLaeletkvenIqdi 64
                ++++d+ ++  qqqv++++++l   ++   +L++  s+q   l++++++I+++
  KHJ30446.1 27 VTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQtYSQQ---LNSNLTQITSL 76
                556666666666666666666655432222222202333...33344444332 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.0017
     NPV_P10  11 adikavddkVdalqqqvddvqenlp 35 
                 + i+a++dkV+alq+  ++++++l+
  KHJ30446.1  92 DKIAALNDKVSALQADKNKLRAELN 116
                 5699************999999886 PP

>> Uso1_p115_C  Uso1 / p115 like vesicle tethering protein, C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   8.0   0.00018     0.091       4      83 ..      28     116 ..      25     157 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00018
  Uso1_p115_C   4 seleseaaslkdeneklkaelqslskalesleqk..eakkaaesqakeleaenkklek..........eleklraelkeekekekekqkEld 83 
                   e+ s  ++ +++ ++l+a+l  + ++l +leq+  ++++++ +q ++l++e +   k          ++ +l  ++++ + ++++ ++El+
   KHJ30446.1  28 TETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTysQQLNSNLTQITSLNSELS---KvnlhrsadndKIAALNDKVSALQADKNKLRAELN 116
                  57788899**************************65444444444444444444...44448888888999999999999999986688887 PP

>> Filament  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   4.0   0.00088      0.45     208     274 ..      17      83 ..       4      90 .. 0.77
   2 ?    7.2   0.6    0.0066       3.4      10      41 ..      91     122 ..      87     161 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00088
                 XXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 208 sealrsakeeitelrrqiqsleieleslkkqkasleaqlaeleerleaeleklqeklseleeelaei 274
                 +e+l+s++  +te+   + + + ++ +l +  a  ++ql +le++++++l++   ++++l++el+++
  KHJ30446.1  17 KEQLSSCNLKVTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTYSQQLNSNLTQITSLNSELSKV 83 
                 5677777777777777788888888888888888888888888888888888888888888888775 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0066
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    Filament  10 NdrlAsYidkVraLEqenkeLeakieeleekk 41 
                 Nd++A+  dkV aL +++++L+a+++   +  
  KHJ30446.1  91 NDKIAALNDKVSALQADKNKLRAELNLNVKPA 122
                 9**********************998766554 PP

>> TRAF_BIRC3_bd  TNF receptor-associated factor BIRC3 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       5.6   2.9e+03      27      52 ..      20      45 ..       8      56 .. 0.70
   2 ?   11.3   0.1   0.00045      0.23      27      59 ..      73     105 ..      70     107 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 5.6
  TRAF_BIRC3_bd 27 verssttieaverqrrldqekieaLe 52
                     ++++++ +      + q+ +  L+
     KHJ30446.1 20 LSSCNLKVTETDSVLSQTQQQVTNLN 45
                   55677777777777777777777776 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00045
  TRAF_BIRC3_bd  27 verssttieaverqrrldqekieaLekKvrqLe 59 
                    + + ++++  v+  r +d +ki+aL+ Kv +L+
     KHJ30446.1  73 ITSLNSELSKVNLHRSADNDKIAALNDKVSALQ 105
                    56778899999999****************997 PP

>> ABC_tran_CTD  ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.3     0.055        28      41      67 ..      32      58 ..      11      64 .. 0.49
   2 ?    6.9   0.3     0.014       7.2       6      53 ..      37      83 ..      33      89 .. 0.77
   3 ?    7.5   0.2    0.0097         5      22      58 ..      71     109 ..      64     116 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.055
  ABC_tran_CTD 41 eklaelsaeleeleaeLeelyerWeeL 67
                    l++++++ ++l+a+L+++ ++   L
    KHJ30446.1 32 SVLSQTQQQVTNLNADLARAHQQLVNL 58
                  335555555555555555554433333 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.014
  ABC_tran_CTD  6 eqreleeleaeIeaLEeeiaeleaeladpelysdpeklaelsaeleel 53
                   q++  +l a++++  +++ +le+  ++  l s+ ++++ l+ el ++
    KHJ30446.1 37 TQQQVTNLNADLARAHQQLVNLEQTYSQQ-LNSNLTQITSLNSELSKV 83
                  57777888888888888888888888876.567778888888888776 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.0097
  ABC_tran_CTD  22 eeiaeleaeladpely.sdp.eklaelsaeleeleaeLe 58 
                   ++i++l+ el++ +l  s + +k+a+l+ +  +l+a+ +
    KHJ30446.1  71 TQITSLNSELSKVNLHrSADnDKIAALNDKVSALQADKN 109
                   578888888888888864445888888888888887654 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5  11.6   0.00039       0.2     140     251 ..      16     116 ..       5     156 .. 0.49

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00039
        Spc7 140 LkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekiee 238
                 Lke+l++   +++e +++L++ ++++++l  +l + +++l            +le+  +++L++   ++++l++e+++ +   +  ++++++l++k+++
  KHJ30446.1  16 LKEQLSSCNLKVTETDSVLSQTQQQVTNLNADLARAHQQL-----------VNLEQTYSQQLNSNLTQITSLNSELSKVNLHRSADNDKIAALNDKVSA 103
                 4455555555555555556666555555555555555544...........444444444444444444444444444444444444444444444444 PP

        Spc7 239 lkeqkseleeeia 251
                 l++ k++l++e++
  KHJ30446.1 104 LQADKNKLRAELN 116
                 4444444433333 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   6.5   0.00027      0.14     160     256 ..       9     111 ..       3     163 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00027
  Exonuc_VII_L 160 ikrlleekkqrleklasrlkspeellerkrqrldeleerleralkkqlkkkrerleelkerlkekleekkerlkklkerle.........lleekke 247
                   +++++   k++l++++ ++++ +++l++ +q++++l+++l ra+++ ++ +++  ++l+++l+ ++++ +++l+k+  +l+          l++k +
    KHJ30446.1   9 FDSKFGILKEQLSSCNLKVTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTYSQQLNSNLT-QITSLNSELSKV--NLHrsadndkiaALNDKVS 102
                   555666667888888888888899999999999999999999888888888888888887774.455555555433..2221122233333444444 PP

  Exonuc_VII_L 248 rleeleekl 256
                   +l++ ++kl
    KHJ30446.1 103 ALQADKNKL 111
                   444444433 PP

>> RTBV_P46  Rice tungro bacilliform virus P46 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.3   0.00029      0.15      27     144 ..      41     160 ..      23     186 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00029
    RTBV_P46  27 htekssrlshvsrglldhlftfssdntervrklhiladylylleseresyknewislkdqvsllqkqnselrariatnkeiieglrepvkkpiyttqdk 125
                  t+ ++ l++  + l++   t+s +    + ++  l   l  ++  r + +++  +l+d+vs lq ++++lra +  n +  +       +p  t  d 
  KHJ30446.1  41 VTNLNADLARAHQQLVNLEQTYSQQLNSNLTQITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKLRAELNLNVKPAKSTDSSDTRPRRTRSDP 139
                 56666777888888888889999999999999999999999999999999999999********************99998888888888888888877 PP

    RTBV_P46 126 erlrv..ffceersmeyiyyh 144
                 +++    +  e+r + y  ++
  KHJ30446.1 140 DKFSAsqLNTEKRQLAYESWK 160
                 666541155666766665544 PP

>> FCH  Fes/CIP4, and EFC/F-BAR homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.1   0.00048      0.24       4      46 ..      33      75 ..      31     203 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00048
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT---- CS
         FCH  4 vlqkrleqgialledlqeflkeRaeiEkeYakkLqkLakkylk 46
                vl + ++q ++l+ dl+   ++  ++E+ Y+++L+    ++ +
  KHJ30446.1 33 VLSQTQQQVTNLNADLARAHQQLVNLEQTYSQQLNSNLTQITS 75
                678888999999**********************976666655 PP

>> Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   6.5   6.5e-05     0.033      48     138 ..      23     113 ..      14     127 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 6.5e-05
  Jnk-SapK_ap_N  48 eeaeleelreeleqLeteyerekelrkraeeeleeiedqweeerkelqekveqleeenrelelkaknaadqlsrleekeaelkkeysklhe 138
                     + ++ e    l+q +++ ++ +++  ra ++l ++e+++ ++ +   +++++l++e  +++l  ++ +d++++l++k + l+ +++kl  
     KHJ30446.1  23 CNLKVTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTYSQQLNSNLTQITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKLRA 113
                    566777777778888889999999999999****************************************************999999865 PP

>> FAM76  FAM76 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   3.8   0.00014     0.074     224     292 ..      16      84 ..      12      91 .. 0.90
   2 ?    6.9   2.8    0.0069       3.5     209     274 ..      61     126 ..      56     151 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00014
       FAM76 224 Lkeeiaslkkqleqkdqellekdkkitelkaellekekelreklkelekeakekieklekkirellkev 292
                 Lke++ s + ++++ d++l++ ++++t+l a+l + +++l +  ++  ++ +++++++++ ++el k +
  KHJ30446.1  16 LKEQLSSCNLKVTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTYSQQLNSNLTQITSLNSELSKVN 84 
                 9**************************************999999999999999999999999998855 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0069
       FAM76 209 sldsnssdhlvavtqLkeeiaslkkqleqkdqellekdkkitelkaellekekelreklkelekea 274
                 + +++ + +l ++t L+ e+ + + + +  + ++ + + k+++l+a++ + ++el+  +k  +++ 
  KHJ30446.1  61 TYSQQLNSNLTQITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKLRAELNLNVKPAKSTD 126
                 6788999*****************999999*******************99999988888776654 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   5.0      0.04        21      18      54 ..      26      62 ..      11      72 .. 0.70
   2 ?    7.7   0.1      0.01       5.3      16      55 ..      91     130 ..      76     139 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.04
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXX CS
        SlyX 18 tieeLndvvaeqqqqidrlqrqlrllaerlkeleess 54
                 + e + v+ + qqq++ l + l++ +++l +le++ 
  KHJ30446.1 26 KVTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTY 62
                4556667777777777777777777777777776654 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.01
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXX CS
        SlyX  16 edtieeLndvvaeqqqqidrlqrqlrllaerlkeleessg 55 
                  d i +Lnd v + q +  +l+++l+l ++  k+ ++s+ 
  KHJ30446.1  91 NDKIAALNDKVSALQADKNKLRAELNLNVKPAKSTDSSDT 130
                 688999*****************99998887777776654 PP

>> DHR10  Designed helical repeat protein 10 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   2.9   0.00067      0.34      62     111 ..      16      65 ..      10      68 .. 0.87
   2 ?    4.0   2.0     0.096        49      53     107 ..      60     114 ..      56     123 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00067
       DHR10  62 lrdaleekeielrelerkeerlqrqlenaeeklerlreqaeekreaakar 111
                 l+++l++ + ++ e ++  ++ q+q+ n +  l+r+++q  + ++   ++
  KHJ30446.1  16 LKEQLSSCNLKVTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTYSQQ 65 
                 899***********************************987776666655 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.096
       DHR10  53 eeakkklkelrdaleekeielrelerkeerlqrqlenaeeklerlreqaeekrea 107
                 ++ +++l+++  ++++++ el++++ +++  + +++  ++k + l+ + ++ r++
  KHJ30446.1  60 QTYSQQLNSNLTQITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKLRAE 114
                 5567888888888899999999999999998889999988888888888777766 PP

>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.8     0.051        26      17      51 ..      32      59 ..      16      64 .. 0.50
   2 ?    9.7   5.9    0.0017      0.86       5      69 ..      55     116 ..      53     129 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.051
        BRE1 17 eqlskkvkeltileekklrleaekakadqkyfaam 51
                + l       +  +++++ l+a+ a+a+q+  +++
  KHJ30446.1 32 SVL-------SQTQQQVTNLNADLARAHQQLVNLE 59
                333.......4445555555555555555544443 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0017
        BRE1   5 LvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnklls 69 
                 Lv+le+ +   s+ql++ ++++t+l +++++++   +    k+ a++ +  al+++ +kL++ l+
  KHJ30446.1  55 LVNLEQTY---SQQLNSNLTQITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKLRAELN 116
                 55555555...6788888999****************************************9887 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.7   0.00075      0.38      64     121 ..      16      74 ..      11      77 .. 0.88
   2 ?    3.0   0.4       0.2     1e+02      68     107 ..      73     112 ..      63     120 .. 0.49

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00075
     DUF1664  64 Lssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeav.eglesklerie 121
                 L++++ + + k+ e+  + ++++++vt+++ dl++ ++++ +++++  ++l+s+l++i 
  KHJ30446.1  16 LKEQLSSCNLKVTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTYsQQLNSNLTQIT 74 
                 677888899999*****************************999875267999998875 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.2
     DUF1664  68 idrvdkkldeqkeiskeikeevtevredlseigedvesvk 107
                 i +++++l +++   ++ +++++++++++s+++ d ++++
  KHJ30446.1  73 ITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKLR 112
                 4444444444444444444444444444444444444433 PP

>> DUF4164  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.2      0.82   4.2e+02      30      57 ..      30      57 ..      19      67 .. 0.77
   2 ?   11.0   1.9   0.00079      0.41      11      56 ..      71     116 ..      60     124 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.82
     DUF4164 30 aerkrdeleaeiealgedrsRLaeeLdq 57
                ++   ++ +++++ l++d +R  ++L +
  KHJ30446.1 30 TDSVLSQTQQQVTNLNADLARAHQQLVN 57
                4555578889999999999998888865 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00079
     DUF4164  11 trLeaaldsLEkavdrrleaerkrdeleaeiealgedrsRLaeeLd 56 
                 t+++    +L k   +r   + k ++l+ +++al++d+++L +eL 
  KHJ30446.1  71 TQITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKLRAELN 116
                 444444455555444555555566*******************995 PP

>> DUF4472  Domain of unknown function (DUF4472)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   2.0      0.41   2.1e+02      43      80 ..      26      63 ..       9      72 .. 0.48
   2 ?   11.5   2.2   0.00077      0.39      29      86 ..      65     122 ..      56     138 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.41
     DUF4472 43 rvlelelerekaaeeiqslrerlaeleeekkeleeeyv 80
                +v+e+++  ++ +++ ++l++ la + ++  +le+ y+
  KHJ30446.1 26 KVTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTYS 63
                44444444444444444444444444444444444433 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00077
     DUF4472  29 ekfelknkvlalenrvlelelerekaaeeiqslrerlaeleeekkeleeeyvvlkkny 86 
                 +     +++ +l++++  ++l+r+  + +i++l++++ +l+++k++l++e+  + k +
  KHJ30446.1  65 QLNSNLTQITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKLRAELNLNVKPA 122
                 44445588999***************************************98876655 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   4.5    0.0018       0.9       7      83 ..      34     109 ..      12     124 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0018
       TMPIT   7 lekefkeleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvkeeeeeeveelkeelkerkkvlk 83 
                 l++ ++++ + +  + +  ++l +l+++ s++++++  ++++l+s+l+k++ +  + ++++++ l+++++  ++  +
  KHJ30446.1  34 LSQTQQQVTNLNADLARAHQQLVNLEQTYSQQLNSNLTQITSLNSELSKVNLHR-SADNDKIAALNDKVSALQADKN 109
                 678888999999999999999999999999999999999999999999999884.6788888888888777665544 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   3.8    0.0067       3.5      21      77 ..      27      84 ..      16      90 .. 0.79
   2 ?    6.3   2.1     0.021        11      19      77 ..      64     112 ..      60     155 .. 0.67

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0067
  TMF_TATA_bd 21 irrlEgElaslkeelerleaerdeareeivklmke.neelkelkkeleelekeleelq 77
                 + + ++ l+++++++++l+a   +a +++v+l ++ +++l+++ +++++l++el++++
   KHJ30446.1 27 VTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTySQQLNSNLTQITSLNSELSKVN 84
                 5556666899999999999999999999999985526788999999999999999886 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.021
  TMF_TATA_bd  19 seirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelq 77 
                  +++ +  ++++sl++el++++  r++ ++ i++l  ++ +l++ k++l          +
   KHJ30446.1  64 QQLNSNLTQITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKL----------R 112
                  444444455556666666666666666666655555555444444443..........2 PP

>> DUF4140  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.7     0.059        30      62      93 ..      28      60 ..      11      64 .. 0.77
   2 ?    8.6   0.6    0.0048       2.5      56      89 ..      82     116 ..      65     123 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.059
     DUF4140 62 aeeee.lkalraeleeledelaaledelaaaea 93
                +e+++ l+++++++++l+++la++ ++l ++e+
  KHJ30446.1 28 TETDSvLSQTQQQVTNLNADLARAHQQLVNLEQ 60
                344444899999999999999999999988887 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0048
     DUF4140  56 r.vpnreaeeeelkalraeleeledelaaledela 89 
                 + + +r+a++++++al++++ +l++++++l++el+
  KHJ30446.1  82 KvNLHRSADNDKIAALNDKVSALQADKNKLRAELN 116
                 32344555555699999999999999999998875 PP

>> Swi5  Swi5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   2.4      0.27   1.4e+02       5      36 ..      34      66 ..      16      86 .. 0.69
   2 ?    8.6   0.3    0.0038         2       3      35 ..      92     124 ..      90     129 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.27
                HHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHH CS
        Swi5  5 ikeleeqleelekelaelkeelkekk.dpeetv 36
                +++ ++q+++l+++la + ++l + + + ++ +
  KHJ30446.1 34 LSQTQQQVTNLNADLARAHQQLVNLEqTYSQQL 66
                466677777777777777777765433444444 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0038
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHH CS
        Swi5   3 aeikeleeqleelekelaelkeelkekkdpeet 35 
                  +i++l++++++l+++ ++l++el+ + +p++ 
  KHJ30446.1  92 DKIAALNDKVSALQADKNKLRAELNLNVKPAKS 124
                 689**********************99888765 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8  11.7     0.062        32     130     172 ..      59     124 ..      15     266 .. 0.63

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.062
     DUF4407 130 a..ltaelaeleaqia.....................alqaeidaaearldalraeaqkeldgtkg 172
                 +  ++++l+ + +qi+                     al+ +++a++a+ ++lrae++ +++++k+
  KHJ30446.1  59 EqtYSQQLNSNLTQITslnselskvnlhrsadndkiaALNDKVSALQADKNKLRAELNLNVKPAKS 124
                 011222222222222222222222222222222222255555555555555555555555544443 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   3.3      0.13        67      19      47 ..      34      62 ..      31      69 .. 0.87
   2 ?    8.6   2.3    0.0029       1.5      20      49 ..      88     117 ..      65     123 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.13
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       DivIC 19 ykqlkqeiaalqaelaklkaeneeLeaev 47
                ++q++q+++ l+a+la+ +++  +Le+  
  KHJ30446.1 34 LSQTQQQVTNLNADLARAHQQLVNLEQTY 62
                67999***************999999875 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0029
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC CS
       DivIC  20 kqlkqeiaalqaelaklkaeneeLeaevkd 49 
                 ++ + +iaal++++ +l+a++++L ae+++
  KHJ30446.1  88 SADNDKIAALNDKVSALQADKNKLRAELNL 117
                 566899********************9986 PP

>> Prominin  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   8.5    0.0062       3.2     598     694 ..      18     115 ..      10     127 .. 0.55

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0062
    Prominin 598 eklresglskihsslyleqlckkltkvnl..etlaekleelanelsngkknlkqslkneaqdlraiqqelvlp......lessvkklkksvkkldeens 688
                 e+l++++l+  +++++l+q+++++t++n      +++l +l ++        +q+l+++  ++ ++++el +        + +++ l+ +v +l+++++
  KHJ30446.1  18 EQLSSCNLKVTETDSVLSQTQQQVTNLNAdlARAHQQLVNLEQTY-------SQQLNSNLTQITSLNSELSKVnlhrsaDNDKIAALNDKVSALQADKN 109
                 467788888888888888888888776641033333333333333.......34444444444444433322211112124456667777777777776 PP

    Prominin 689 dlqesi 694
                 +l++++
  KHJ30446.1 110 KLRAEL 115
                 666654 PP

>> TMF_DNA_bd  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.6      0.02        10      43      72 ..      35      64 ..      16      65 .. 0.79
   2 ?    5.9   2.7     0.025        13      13      57 ..      72     116 ..      65     127 .. 0.89

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.02
  TMF_DNA_bd 43 kelekeikelkkkleklekeleeleerlke 72
                +++ +++++l+  l++  ++l +le+ +++
  KHJ30446.1 35 SQTQQQVTNLNADLARAHQQLVNLEQTYSQ 64
                566789999999999999999999998775 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.025
  TMF_DNA_bd  13 qIaqLmeEGekLskkelklnntikkLrkknkelekeikelkkkle 57 
                 qI+ L +E+ k      + n +i  L+ k++ l  + ++l  +l+
  KHJ30446.1  72 QITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKLRAELN 116
                 8999999999999999999***********999999999998887 PP

>> LPP  Lipoprotein leucine-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.4    0.0031       1.6       5      51 ..      16      62 ..      12      64 .. 0.93
   2 ?    5.2   3.9     0.053        27       8      30 ..      93     115 ..      63     123 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0031
         LPP  5 LssqVsqLkskvdqlssdvnsakaaaqaakeEAaRANqRlDNiaqsY 51
                L +q+s+ + kv +  s ++++++++ +  ++ aRA q l N  q+Y
  KHJ30446.1 16 LKEQLSSCNLKVTETDSVLSQTQQQVTNLNADLARAHQQLVNLEQTY 62
                67899999**********************************99999 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.053
         LPP   8 qVsqLkskvdqlssdvnsakaaa 30 
                  + +L++kv++l++d n+++a++
  KHJ30446.1  93 KIAALNDKVSALQADKNKLRAEL 115
                 57788888888888888888765 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   2.0      0.26   1.3e+02       7      38 ..      38      69 ..      11      83 .. 0.65
   2 ?    7.7   0.7     0.011       5.6       8      62 ..      71     125 ..      66     151 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.26
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA  7 fdkleeleeqleelleeleelkeelaelleen 38
                 +++++l+ +l++ +++l +l+++ ++ l+ n
  KHJ30446.1 38 QQQVTNLNADLARAHQQLVNLEQTYSQQLNSN 69
                35666666666666666666666666655555 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.011
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH......XXXXXXXXXX CS
        YabA   8 dkleeleeqleelleeleelkeelaelleenaeLeleneklrerl......eeeekkekek 62 
                 +++++l+++l++++ + ++ ++++a+l ++ ++L+++++klr +l      +      k++
  KHJ30446.1  71 TQITSLNSELSKVNLHRSADNDKIAALNDKVSALQADKNKLRAELnlnvkpA------KST 125
                 678899999999999999999999999999999********99995443331......222 PP

>> Lectin_N  Hepatic lectin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   2.5     0.076        39      76     118 ..      14      56 ..       7      67 .. 0.72
   2 ?    7.0   4.8    0.0087       4.4      55     115 ..      53     120 ..      50     125 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.076
    Lectin_N  76 qalssqggslsekvtsleaklekkqqdlkadhselllhvkqlv 118
                   l+ q +s++ kvt  ++ l + qq++++  ++l    +qlv
  KHJ30446.1  14 GILKEQLSSCNLKVTETDSVLSQTQQQVTNLNADLARAHQQLV 56 
                 5567777788888888888888888887777777776666665 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0087
    Lectin_N  55 reLetLketfsnfssstlaeiqalss.......qggslsekvtsleaklekkqqdlkadhselllhvk 115
                 ++L+ L++t+s   +s l++i +l+s       + +  ++k++ l+ k+   q+d ++  +el l vk
  KHJ30446.1  53 QQLVNLEQTYSQQLNSNLTQITSLNSelskvnlHRSADNDKIAALNDKVSALQADKNKLRAELNLNVK 120
                 5688888888888888888888888888888879999999***********99999999999999998 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   3.6      0.01       5.3      46     119 ..      31      80 ..      14      85 .. 0.55
   2 ?    9.7   2.9    0.0024       1.2      12      71 ..      60     116 ..      57     127 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.01
      APG6_N  46 deeleeleeeleklekeeeelleeLkeleker.eeleaelaaleeelealeeeeerfwreynelqlelleleeel 119
                 d+ l ++++++ +l+++ +++ ++L +le++  ++l++ l ++++                         l+ el
  KHJ30446.1  31 DSVLSQTQQQVTNLNADLARAHQQLVNLEQTYsQQLNSNLTQITS-------------------------LNSEL 80 
                 455666666666666666666666666666531445555555444.........................44433 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0024
      APG6_N  12 eeldkqleqaekerdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLk 71 
                 +++ +ql++   ++ ++++ l+k++ +++ ++   +++++l++++++l++++++l +eL+
  KHJ30446.1  60 QTYSQQLNSNLTQITSLNSELSKVNLHRSADN---DKIAALNDKVSALQADKNKLRAELN 116
                 789999********************988876...7********************9996 PP

>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   5.5     0.011       5.7      12      62 ..      33      88 ..      22      92 .. 0.80
   2 ?    3.6   0.4      0.16        80      12      36 ..      93     117 ..      89     172 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.011
       Spc24 12 elsdleselesleselaelkeeleeleeesee....keser...ve.detllklklYrs 62
                 ls++++++++l++ la+ +++l +le+  ++    +   +   +  ++ l k++l rs
  KHJ30446.1 33 VLSQTQQQVTNLNADLARAHQQLVNLEQTYSQqlnsN---LtqiTSlNSELSKVNLHRS 88
                5789999*******************99998876433...2344666888899999887 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.16
       Spc24  12 elsdleselesleselaelkeelee 36 
                 ++  l++++++l++ +++l++el+ 
  KHJ30446.1  93 KIAALNDKVSALQADKNKLRAELNL 117
                 5667888888888888888888874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2021  (0.112722); expected 358.6 (0.02)
Passed bias filter:                      781  (0.0435607); expected 358.6 (0.02)
Passed Vit filter:                       126  (0.00702772); expected 17.9 (0.001)
Passed Fwd filter:                        39  (0.00217525); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              35  [number of targets reported over threshold]
# CPU time: 0.71u 0.30s 00:00:01.01 Elapsed: 00:00:00.46
# Mc/sec: 1729.21
//
Query:       KHJ30447.1  [L=647]
Description: putative sodium hydrogen exchanger [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.7e-72  242.9  37.2    5.8e-72  242.6  37.2    1.0  1  Na_H_Exchanger   Sodium/hydrogen exchanger family
  ------ inclusion threshold ------
        2.7    8.4  34.8       0.21   12.0   7.3    4.0  4  DUF4199          Protein of unknown function (DUF4199)


Domain annotation for each model (and alignments):
>> Na_H_Exchanger  Sodium/hydrogen exchanger family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.6  37.2   6.4e-76   5.8e-72       2     379 ..      40     451 ..      37     453 .. 0.93

  Alignments for each domain:
  == domain 1  score: 242.6 bits;  conditional E-value: 6.4e-76
                     HHHHHHHHHHHHH.HHHTT.SXHHHHHHHHHHHHTTTTTS..........HHHCHCCHHHHCHHCCHHHHCTCGCCTGCCTHHHHHHHHHHHHHH CS
  Na_H_Exchanger   2 vllillallvgll.arrlk.lpeivgliiaGlllGpsglg....lieps.eedlevlselglilllFlaGleldlrelrknlksilllallgvli 89 
                      ll+++++++++l  +r+  ++e+v+ i+aG+ +G++++     +i++   +  +++++l+l+++++++G+el+ +++++n+++il +al+g++i
      KHJ30447.1  40 MLLMAALFTSYMLqQKRVEaVHETVISIFAGMTVGLILRLssgtSIQNLvSFNYQIFFNLLLPPIILASGYELHQANFFRNIGTILTFALPGTFI 134
                     3444445555558899999*******************995554455549********************************************* PP

                     HHHHHHHHHH.H.....HTXTTCHHHHHHHHHHHTSSXHHHHHHHC.CCCTSTCCCCCCHHHHHHHHHHHCCCCCHHHHHHTX...XXXXTSSST CS
  Na_H_Exchanger  90 tvvliGlllyll.....lilgiplleallfgailsatdpvvvlailkeegrvperlgtlllgesvlnDavavvllavllalak...eeaggetsl 176
                     ++ ++Gl+l+++      ++++++++a+ +ga lsatdpv++lai+ +  +v+ +l+t+++ges+lnDava+vl+  ++ + +    ++ g + l
      KHJ30447.1 135 SAMVLGLILWVYtrvpiDGFDMSFVDAISVGATLSATDPVTILAIF-NTYKVDPKLYTIIFGESMLNDAVAIVLFETAQRYKEggaAGTLGFINL 228
                     **********99***99778**************************.**********************************98877777788888 PP

                     SXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS..CTHHHHHHHHHHHHHHHHHHHHHTSXXXHHHHHHHHHHHHHHHHHHTTHHHH....HHHHH CS
  Na_H_Exchanger 177 llllliflvvavgglllglvigwllrlitrft..dddrelevllvlllallaallaellgvsgilgaflaGlvlseyefsnklsek....lesfr 265
                     + +++ifl+v++g+ll+g+++g  ++l++++t  ++ +++e +l++l+a+++++++  l++sgi+  +++G++l++y++ n +s +    +++f+
      KHJ30447.1 229 MEGIGIFLIVFFGSLLIGVIVGIGTALVLKWTyvRRFPKIESCLIVLIAYASYFFSNGLHMSGIVTLLFCGITLKHYAYYN-MSRRtqltTKYFF 322
                     9**************************************************************************999999.5555578899999 PP

                     H...HHHHHHHHHHHHHHSXHHHHHXXHHHHHHHHHHHHHHHTHHHHHHHHHTTTX.................SSXHHHHHHCCCCSS.BHHHHH CS
  Na_H_Exchanger 266 e...glfnplfFvlvGlsldlkvlnnhlsvlilvllilvaillgrilavflllrll.................glslrealiigfgglqrgaval 340
                     +   +l ++++F+++Glsl+ ++    ++ +++++++++ i ++r +avf+l+r++                  l+ + +++++++gl rgav +
      KHJ30447.1 323 QvlaQLSENFIFIYLGLSLFTESKL--EFKPLFIIVTVIGICAARWAAVFPLSRAInwfiryrarnkskeaadELPYNYQAMLFWAGL-RGAVGV 414
                     9999****************77775..9********************************************99**************.****** PP

                     HHHHHHHHHXHHHHTTSSTTTCSTSXHHHHHHHHHHHHH CS
  Na_H_Exchanger 341 alaalgpalgllarelyallivvvlftvlvqGlslkpll 379
                     alaa ++ +  ++ +l a+++vvv++tv+++G++ + +l
      KHJ30447.1 415 ALAAGLTGA--NSWALKATVLVVVVLTVIIFGGTSARML 451
                     ****99999..99999****************9998887 PP

>> DUF4199  Protein of unknown function (DUF4199)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   1.7    0.0033        29      31      77 ..      31      78 ..      18      93 .. 0.69
   2 ?   12.0   7.3   2.4e-05      0.21      30     167 ..     120     258 ..      99     258 .. 0.63
   3 ?    6.4   5.4    0.0012        11       3      87 ..     286     370 ..     284     373 .. 0.71
   4 ?   -2.3   0.0      0.58   5.2e+03      61      83 ..     399     421 ..     372     433 .. 0.72

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0033
     DUF4199 31 pllgllallllllvpflvylalkkyrkknl.gGfisfgqafgfgflis 77
                + ++l+ +++ll+  +++ + l ++r ++  + +is+  ++++g+++ 
  KHJ30447.1 31 SSWALFIMIMLLMAALFTSYMLQQKRVEAVhETVISIFAGMTVGLILR 78
                334444455666656666666666676666255***********9875 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 2.4e-05
     DUF4199  30 gpllglla.llllllvpflvylalkky.rkknlgG.fisfgqafgfgflislvagllsavfqyiyfnfidpdfienyiaeilekleeakeesaeeenae 125
                 ++ + l++ l  ++++  ++ l l+ y r  + +G  +sf  a+++g  +s+    +++++++ ++  +dp + + ++ e    + +++     + + +
  KHJ30447.1 120 NIGTILTFaLPGTFISAMVLGLILWVYtRVPI-DGfDMSFVDAISVGATLSATD-PVTILAIFNTY-KVDPKLYTIIFGES---MLNDAV----AIVLF 208
                 32333333455555555556666665525555.999***********9984432.23333334444.67999555555443...222222....67777 PP

     DUF4199 126 mseeeike........aleslspiivalqsflgnliiGlilsliiAlilk 167
                 ++++ +ke         ++ ++ i ++l+ f+g+l+iG+i+++ +Al+lk
  KHJ30447.1 209 ETAQRYKEggaagtlgFINLMEGIGIFLIVFFGSLLIGVIVGIGTALVLK 258
                 78888877555555544558889999*********************998 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0012
     DUF4199   3 Glilglvwilifll.ilyllglhqi..lstgpllgllallllllv..pflvylalkkyrkknlgGfisfgqafgfgflislvagllsavf 87 
                 Gl +  ++ l+f++ +l  +  + +    t+  + +++ +l+ l+  ++++yl+l  + +     ++ f+  f+++++i ++a+ + avf
  KHJ30447.1 286 GLHMSGIVTLLFCGiTLKHYAYY-NmsRRTQLTTKYFFQVLAQLSenFIFIYLGLSLFTES----KLEFKPLFIIVTVIGICAARWAAVF 370
                 66666677777776555554443.21133447777777555555567999******99444....69*****************999987 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 0.58
     DUF4199  61 gGfisfgqafgfgflislvagll 83 
                    + f+ +++ +++++l agl 
  KHJ30447.1 399 YQAMLFWAGLRGAVGVALAAGLT 421
                 34688999999999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (647 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1096  (0.06113); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 4351.69
//
Query:       KHJ30448.1  [L=178]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1364.33
//
Query:       KHJ30449.1  [L=261]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       794  (0.0442858); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 2120.61
//
Query:       KHJ30450.1  [L=331]
Description: hypothetical protein EV44_g3702 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-05   24.1   0.6     0.0034   17.6   0.1    3.1  4  Retrotrans_gag  Retrotransposon gag protein
  ------ inclusion threshold ------
        0.1   12.6   0.0       0.51   10.4   0.0    2.0  2  DUF4537         Domain of unknown function (DUF4537)
        4.3    7.8   5.3        1.2    9.6   1.7    2.0  2  KIF1B           Kinesin protein 1B


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.94   5.6e+03       2      24 ..      38      60 ..      37      67 .. 0.81
   2 ?   -3.5   0.0       2.1   1.3e+04      26      37 ..      99     110 ..      84     113 .. 0.60
   3 !   17.6   0.1   5.7e-07    0.0034      32      96 .]     161     246 ..     139     246 .. 0.85
   4 ?    3.5   0.0     0.015        89      19      52 ..     249     282 ..     245     286 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.94
  Retrotrans_gag  2 lastslegaAkswlkslvarsid 24
                    + s++le+a   +++++ +++++
      KHJ30450.1 38 FYSFHLEDAQTPHYDPFSEEQEK 60
                    67899999999999999888876 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.1
  Retrotrans_gag  26 sesWkdlkkafl 37 
                     ++ ++++++af 
      KHJ30450.1  99 AQFFRQIRTAFE 110
                     556666666665 PP

  == domain 3  score: 17.6 bits;  conditional E-value: 5.7e-07
  Retrotrans_gag  32 lkkaflktflps..erkdqleeelsslrQ.gtesvreYvtrfktladqldevlte....................eakiekflaGLne 96 
                     +++ ++++f p   e+k++  +el  +rQ +te+++ Y++r   l+ +l+  lt+                    + + ++++ GLn+
      KHJ30450.1 161 CRDLLMTQFAPAeiEQKNDWMAELNLFRQeKTETLSSYYNRAVVLMKNLK--LTDtnqdgipgkventpaekhllKTLCMAYYMGLND 246
                     67788888888422467777899***************************..777778899999999999999999999999999986 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.015
  Retrotrans_gag  19 varsidasesWkdlkkaflktflpserkdqleee 52 
                      +r++ +++ W+++++ +l ++l +e+k+++ee+
      KHJ30450.1 249 LKRRVFQVKGWSKCSSLLLMHNLVTEEKNDMEEQ 282
                     5667777899********************9986 PP

>> DUF4537  Domain of unknown function (DUF4537)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   8.5e-05      0.51      44      83 ..     142     181 ..     124     209 .. 0.74
   2 ?   -0.9   0.0      0.27   1.6e+03      74     109 ..     219     256 ..     203     264 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 8.5e-05
     DUF4537  44 diialedakehslkvgDkVLAlhdpeeqeYvPGiVlagp..s 83 
                  ++a+ d  + s++++D V+A++d    +++P+ + + +   
  KHJ30450.1 142 RMVACMD--DSSCATEDDVVACRDLLMTQFAPAEIEQKNdwM 181
                 3444433..589***********************9655441 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.27
     DUF4537  74 vPGiVlagp..sakeeeltVrfydgkkakvpreeviki 109
                 +PG+V  +p  +   ++l   +y g +  v +++v+ +
  KHJ30450.1 219 IPGKVENTPaeKHLLKTLCMAYYMGLNDPVLKRRVFQV 256
                 78999887766556677777777777777777777665 PP

>> KIF1B  Kinesin protein 1B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   1.7   0.00021       1.2      14      45 ..      33      62 ..      11      63 .. 0.73
   2 ?   -2.4   0.1       1.1   6.8e+03       7      26 ..     267     286 ..     265     293 .. 0.58

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00021
       KIF1B 14 eskegesrsh.svdtseslsgs....DPFyEsqenhs 45
                e++ ++++ h +         +    DPF+E qe++s
  KHJ30450.1 33 EIDSKFYSFHlEDA-------QtphyDPFSEEQEKFS 62
                45566665554433.......13445********987 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.1
       KIF1B   7 dMRemYeeskegesrshsvd 26 
                 +M ++  e k+  +++ +v+
  KHJ30450.1 267 LMHNLVTEEKNDMEEQARVE 286
                 56666666666665444555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       895  (0.0499191); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.36
# Mc/sec: 2751.40
//
Query:       KHJ30451.1  [L=192]
Description: hypothetical protein EV44_g3464 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.053   14.0   0.1       0.08   13.4   0.1    1.2  1  NUDE_C    NUDE protein, C-terminal conserved region


Domain annotation for each model (and alignments):
>> NUDE_C  NUDE protein, C-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   4.4e-06      0.08      33     126 ..      75     161 ..      73     184 .. 0.60

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.4e-06
      NUDE_C  33 LrievQRLrDelsDLkvel...eiiqeklrkaeeklrrrkplslsspstpqsleiekrspavqasssPviatppekslsslatgsetatppsPpase 126
                 +r+ +Q+L++++  L++e    +i + ++ +      ++ +++ s ps p+   ++++++ ++    P   t+++++  + ++  +++ + +Pp+ e
  KHJ30451.1  75 VRVGNQKLKNDVDQLRQEEmnrDIPETQIGN------ANGKIPDSLPSRPTMASMTAKNAPTT--IKPANWTTLASK--KGQKNYDNSNSITPPLEE 161
                 799**************96222444444444......34445555588884444443333333..466666666665..333234445566666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1507.59
//
Query:       KHJ30452.1  [L=1495]
Description: putative metallo-dependent phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1495 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       490  (0.02733); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.82u 0.27s 00:00:01.08 Elapsed: 00:00:00.44
# Mc/sec: 10180.92
//
Query:       KHJ30453.1  [L=513]
Description: hypothetical protein EV44_g5491 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.016   15.5   0.2      0.058   13.7   0.0    2.0  2  Retrotrans_gag  Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   3.3e-06     0.058      25      80 ..      89     146 ..      59     160 .. 0.76
   2 ?   -2.3   0.0       0.3   5.4e+03      44      69 ..     205     230 ..     183     238 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 3.3e-06
  Retrotrans_gag  25 a...sesWkdlkkaflktflpserkdqleeelsslrQgtesvreYvtrfktladqlde..v 80 
                     +   ++sW   +    ++  p  r ++l+e l++l+Q++es++ Y++r ++l+ +     +
      KHJ30453.1  89 DvqtVKSWLISQYPIVSQMIP--RGNLLDE-LRELSQQEESLETYFERAHELLKYTGSrdQ 146
                     455566666666666777777..6677777.*********************999885444 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.3
  Retrotrans_gag  44 erkdqleeelsslrQgtesvreYvtr 69 
                     +++++leee +++r + e  + Y+++
      KHJ30453.1 205 QNMRTLEEEMQRMRIEMERADSYFNK 230
                     45666777777776666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (513 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       950  (0.0529868); expected 358.6 (0.02)
Passed bias filter:                      568  (0.0316805); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.23s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 3821.06
//
Query:       KHJ30454.1  [L=429]
Description: putative nuclear protein es2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-109  368.1  11.1   1.7e-109  367.5  11.1    1.3  1  Es2       Nuclear protein Es2
  ------ inclusion threshold ------
      0.049   14.4   1.5       0.24   12.1   0.1    2.4  2  TbpB_A    N-Lobe handle Tf-binding protein B


Domain annotation for each model (and alignments):
>> Es2  Nuclear protein Es2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  367.5  11.1  1.9e-113  1.7e-109       2     431 .]      30     411 ..      29     411 .. 0.84

  Alignments for each domain:
  == domain 1  score: 367.5 bits;  conditional E-value: 1.9e-113
         Es2   2 qkvLdEdeYtdaLskIIaRDFFPgLlelraqneyLdAleskDkewireaqrrltevmakkrtptsrgrrrrkksatsatplaraaeTPlsawggdTPas 100
                 ++v+dE++Yt+a+s+IIaRDFFPgLle+++++eyLdAlesk+k+wi++aqrrl++vm    tp +++rr r +s           + Pls++       
  KHJ30454.1  30 KNVIDEESYTQAISEIIARDFFPGLLESETKQEYLDALESKNKAWISSAQRRLEQVM----TPIQQNRR-RGTS----------LQNPLSDLD------ 107
                 68*******************************************************....88777773.3312..........455666311...... PP

         Es2 101 vaseeleteseetaaesaseees.kkavdenlsLdaFqskYTSEDNeSFnklldkqnekrrekyawlwege.kiaskrqiaqrereakllekekrlaie 197
                  +s++l+ + ++ + +s++++ + +++vd+n+sLd+FqskYTSEDNeSF+klld qn+kr+ekyaw+w+g  ki+sk+ ++q+e+e kll+   r++++
  KHJ30454.1 108 -SSRGLTGRTTSPNYSSDATNLEiGSRVDTNMSLDRFQSKYTSEDNESFYKLLDSQNQKRAEKYAWMWSGHnKIPSKMMLKQKETEIKLLK--SRETLQ 203
                 .111111111211112222222259********************************************988*******************..556667 PP

         Es2 198 adgsktselaaepseddrpakpdtwkykarNsLMFkPdsvedaleteaekaeaasrakpkeinyantRleekskeseakeeeasevpaspslsairaai 296
                 +dg k+++   ++ +d+  +++++w++k++N LMF Pd+ved+  t a+ka+++s+ +pk+++y ntR+ +     ++ e ++s vp+spslsa+r+ai
  KHJ30454.1 204 DDGGKRDR--LAI-RDNSEKSIKSWNSKPNNGLMFIPDGVEDQIPTIASKAQKDSKIAPKRVVYDNTRMPGG---PDQIESQSSVVPPSPSLSAVRKAI 296
                 99888883..333.39999**************************************************433...33444467888************* PP

         Es2 297 agrprkadseagyagsetprvnGYafVddePspepgsaeeeaelkllsplmtwgeidatPlrldsedtpsgnpFkipeaskREelahrlvekvakkkrs 395
                 +g+++  +s+++ +g etpr+nGYafVddeP++e+           +++l++ g++d+t            npF+i+++s+RE+l hr+v+k a+kkr 
  KHJ30454.1 297 SGNRQVPESDNECEGFETPRINGYAFVDDEPELESY---------QENKLIELGNMDSTK-----------NPFTIKAQSRREDLLHRIVDKNARKKR- 374
                 ***999999999********************8776.........6788999********...........***************************. PP

         Es2 396 ekaas.skktsgaatPr....ssplaksrsaasLtPAAqrL 431
                  ++++ + + ++++tP     ssp   + s+++LtPAAqrL
  KHJ30454.1 375 -QSIKyGFTGKVEQTPTlkfpSSP---RVSSTQLTPAAQRL 411
                 .44443444446689988777777...6699*********8 PP

>> TbpB_A  N-Lobe handle Tf-binding protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   2.7e-05      0.24      66     118 ..     144     195 ..      92     202 .. 0.79
   2 ?    0.6   0.1     0.097   8.7e+02      39     100 ..     324     384 ..     306     395 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.7e-05
      TbpB_A  66 kevkkksdekesfvhshdgskksrkrdyqYVrsGyvlkkegskekkdkkekkl 118
                 +  k +s+++esf +  d+++++r ++y + +sG+   +++ + k+++ e kl
  KHJ30454.1 144 QS-KYTSEDNESFYKLLDSQNQKRAEKYAWMWSGHNKIPSKMMLKQKETEIKL 195
                 22.466788889************************98888888888877776 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.097
      TbpB_A  39 eegeeevplseediekved.ellkipkekevkkksdekesfvhshdgskksrkrdyqYVrsGy 100
                  ++ e + ++e+ + ++++ +++k+p + +  ++s  ++   + +d++ +++ +  +Y + G 
  KHJ30454.1 324 DDEPELESYQENKLIELGNmDSTKNPFTIK--AQSRREDLLHRIVDKNARKKRQSIKYGFTGK 384
                 555566777777777777777777777777..7777777666666777777777778877775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 3077.59
//
Query:       KHJ30455.1  [L=354]
Description: putative pre-mrna-splicing factor spp2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.2e-18   65.2   0.3    4.2e-18   65.2   0.3    2.8  3  G-patch_2  G-patch domain


Domain annotation for each model (and alignments):
>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.2      0.44   7.9e+03      27      50 ..      99     119 ..      94     121 .. 0.57
   2 !   65.2   0.3   2.4e-22   4.2e-18       1      60 [.     243     294 ..     243     295 .. 0.89
   3 ?   -1.2   0.5      0.13   2.3e+03      39      50 ..     326     342 ..     313     349 .. 0.52

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.44
   G-patch_2  27 WkegqgigknkkgrvkpeepkrRp 50 
                 Wk + ++ +++    +  +++rR+
  KHJ30455.1  99 WKSELRRRRKA---NDLLHQERRA 119
                 55444444443...3567777776 PP

  == domain 2  score: 65.2 bits;  conditional E-value: 2.4e-22
   G-patch_2   1 peeasleeyeevPVeeFGaAlLrGMGWkegqgigknkkgrvkpeepkrRpgrlGLGakpa 60 
                 pe+++le+ye+vPVeeFG+AlLrGMGW+ g+++g  k       ++k+R  +lGLGak++
  KHJ30455.1 243 PEPSTLEDYERVPVEEFGSALLRGMGWN-GEKVGGIK-------KVKPRQNLLGLGAKEL 294
                 899*************************.55555553.......79***********986 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.13
   G-patch_2  39 gr.....vkpeepkrRp 50 
                 gr      k ee+krR+
  KHJ30455.1 326 GRlkpadYKREEEKRRK 342
                 44223324444455554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       738  (0.0411624); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2687.02
//
Query:       KHJ30456.1  [L=1002]
Description: hypothetical protein EV44_g5458 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-08   34.8   1.3    1.8e-07   31.4   0.2    2.8  3  rve              Integrase core domain
    1.6e-05   24.7   1.5    1.6e-05   24.7   1.5    2.6  3  gag_pre-integrs  GAG-pre-integrase domain
  ------ inclusion threshold ------
       0.15   12.4   6.7       0.35   11.2   0.0    4.2  4  Retrotrans_gag   Retrotransposon gag protein
        0.2   11.5   0.2       0.34   10.7   0.2    1.3  1  Asp-Al_Ex        Predicted Permease Membrane Region
       0.36   11.4   1.6        4.1    8.0   0.1    3.3  3  NifW             Nitrogen fixation protein NifW
        2.8    8.2   7.3       0.12   12.6   1.0    2.0  2  CEBP_ZZ          Cytoplasmic polyadenylation element-binding 


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.56   1.7e+03      81     100 ..      35      54 ..      23      70 .. 0.81
   2 ?    0.2   0.0      0.28   8.2e+02      50      93 ..      58     101 ..      44     107 .. 0.79
   3 !   31.4   0.2   5.9e-11   1.8e-07       5     117 ..     762     867 ..     760     869 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.56
         rve  81 kafrefladlgirvsftrpg 100
                 ++fr++l+++gi v+ t++ 
  KHJ30456.1  35 QRFRKLLREHGIYVRKTKVS 54 
                 59**********99988775 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.28
         rve  50 tvlalleravarfggvepervlsDngseytskafrefladlgir 93 
                 +++++l+  ++   ++e+e+++ D+   y+s +++ + ++l+++
  KHJ30456.1  58 AIAEALNSQYREWTKSEVEEIIKDKTFNYVSVKLQYIKEQLQTQ 101
                 56778888888888888*************99888887777766 PP

  == domain 3  score: 31.4 bits;  conditional E-value: 5.9e-11
         rve   5 gelwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpq 103
                 ++ + +D+++++  +++    +l++vd ++r+  a  l++ ++++++  l ++ ++ + g  p+++l D g+ ++s++f + +a + ++ ++ ++   +
  KHJ30456.1 762 NYTIVIDIMYIE--GKE----VLHIVDEATRFQAARWLDNVTSKHVWDTLRQCWIDTYVGP-PDYILHDAGKKFISREFVQNAAAMSTSTKNVPVEAHW 853
                 567889999999..555....99******************77777777777788888888.************************************* PP

         rve 104 dnGkvErfhrtlkd 117
                 + G+vEr h+ l++
  KHJ30456.1 854 SIGLVERYHQVLRR 867
                 **********9997 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       1.4   4.3e+03      53      64 ..     410     421 ..     391     422 .. 0.68
   2 ?   -3.6   0.2       3.5     1e+04      29      34 ..     666     671 ..     666     672 .. 0.92
   3 !   24.7   1.5   5.2e-09   1.6e-05       7      64 ..     679     743 ..     673     744 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.4
  gag_pre-integrs  53 isksevCeaCql 64 
                      ++ +++C +C++
       KHJ30456.1 410 FNRKRKCIVCHK 421
                      456789*99985 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 3.5
  gag_pre-integrs  29 rRLGHp 34 
                      rR+GHp
       KHJ30456.1 666 RRFGHP 671
                      7****9 PP

  == domain 3  score: 24.7 bits;  conditional E-value: 5.2e-09
  gag_pre-integrs   7 lssnanssvslsk...nkssinlWHrRLGHpsfsrlkkLfkkgllpglkisk....sevCeaCql 64 
                       +s+ ++s s+s    ++ ++++ HrR+GHps +rl+++ +++  +++++sk     ++C +Cq+
       KHJ30456.1 679 PQSLVQESFSFSEsylTEIELHRLHRRFGHPSANRLRSILERSGHDNIDKSKletlTKFCVHCQK 743
                      45677778888774555788999******************88889988888555666*****96 PP

>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00012      0.35       3      60 ..     230     286 ..     229     290 .. 0.86
   2 ?    0.8   0.1      0.21   6.2e+02      25      53 ..     357     384 ..     344     397 .. 0.80
   3 ?   -0.0   0.2      0.36   1.1e+03      45      73 ..     444     469 ..     428     486 .. 0.63
   4 ?   -2.5   0.1       2.2   6.6e+03      11      25 ..     789     803 ..     783     815 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00012
  Retrotrans_gag   3 astslegaAkswlkslvarsidasesWkdlkkaflktflpserkdqleeelsslrQ.gt 60 
                     +++ l+g+A++ + +lv +s++    + +l++ f ++f+ +e ++   +e+ s++  +t
      KHJ30456.1 230 FPIMLRGNAQEYYYNLVHNSPN--IEFLQLCQSFGDHFEGEELRRNVLDEWNSFTLqQT 286
                     7899******************..7***************9888888888888775345 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.21
  Retrotrans_gag  25 a.sesWkdlkkaflktflpserkdqleeel 53 
                     + +++W+ +   f++++ +    + +e+++
      KHJ30456.1 357 SsISTWESCHPNFNSNNSS--SINFTERKF 384
                     2467*************99..666666665 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.36
  Retrotrans_gag  45 rkdqleeelsslrQgtesvreYvtrfktl 73 
                     r+++ ++  ++++Q    v+eY ++++t 
      KHJ30456.1 444 RMNRPNNFNQHFQQ---FVSEYEKELETS 469
                     44554444444444...788888888765 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 2.2
  Retrotrans_gag  11 Akswlkslvarsida 25 
                     A+ wl+++ ++++++
      KHJ30456.1 789 AARWLDNVTSKHVWD 803
                     788888888877664 PP

>> Asp-Al_Ex  Predicted Permease Membrane Region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.2   0.00011      0.34      62     129 ..     506     574 ..     501     614 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00011
   Asp-Al_Ex  62 lFlaavGlsaGpgffsslkkdGlklvllallvtvvplllalvlaklvlkldlallaGll..aGalTstpa 129
                  Fl  +G   G+++++ l++++++ +l+a   t+ + l + v  +   +++  + +G++  +Ga T++ a
  KHJ30456.1 506 TFLTSIGPINGSSIVEDLANRSFTHALTASQRTINNSLSTSVYMQ-SQRYNSNEFFGIMidTGAATQSTA 574
                 6****************************************9999.***********9955699998764 PP

>> NifW  Nitrogen fixation protein NifW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.1    0.0014       4.1      22      78 ..      20      76 ..       5      89 .. 0.87
   2 ?   -1.0   0.1      0.87   2.6e+03      37      79 ..     453     495 ..     452     497 .. 0.83
   3 ?   -0.9   0.0      0.81   2.4e+03      57      71 ..     857     871 ..     829     879 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0014
        NifW 22 eydpkvvnvnRLHILkrfsqylaeedeaeeadeeealakaralLerAYedfvessal 78
                ++d ++ n  RL  L+rf++ l+e+    ++++ +   ++ ++L++ Y++ ++s+  
  KHJ30456.1 20 KWDSTIFNKVRLPTLQRFRKLLREHGIYVRKTKVSCSIAIAEALNSQYREWTKSEVE 76
                4688999********************999999999****************99764 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.87
        NifW  37 krfsqylaeedeaeeadeeealakaralLerAYedfvessale 79 
                 ++f+q ++e +++ e+++++++++  ++Le    d  +s++ +
  KHJ30456.1 453 QHFQQFVSEYEKELETSDDDSIDNFCETLEALILDSSSSTPEN 495
                 7899999999999999999999999999998777777777765 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.81
        NifW  57 alakaralLerAYed 71 
                  +++++++L rAYe 
  KHJ30456.1 857 LVERYHQVLRRAYEI 871
                 478999*******86 PP

>> CEBP_ZZ  Cytoplasmic polyadenylation element-binding protein ZZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.7         6   1.8e+04      27      38 ..     330     341 ..     322     343 .. 0.72
   2 ?   12.6   1.0   4.1e-05      0.12      22      55 ..     405     438 ..     382     444 .. 0.73

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 6
     CEBP_ZZ  27 fCrdlaCfkYyC 38 
                  Cr+++   Y C
  KHJ30456.1 330 ACRSVKACSYAC 341
                 488887777877 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 4.1e-05
     CEBP_ZZ  22 argpyfCrdlaCfkYyCetCwqrrHsaeskeaaH 55 
                 ++ ++f r+++C+  + e Cw+ +Hs+++ ++a 
  KHJ30456.1 405 RQPRVFNRKRKCIVCHKEGCWSSNHSKSEIMNAK 438
                 24789********************999877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1002 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1093  (0.0609627); expected 358.6 (0.02)
Passed bias filter:                      629  (0.0350828); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.75u 0.28s 00:00:01.03 Elapsed: 00:00:00.43
# Mc/sec: 7012.91
//
Query:       KHJ30457.1  [L=869]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.067   13.0   1.4       0.54   10.1   0.1    2.8  3  Exo_endo_phos_2  Endonuclease-reverse transcriptase


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.2      0.19   3.4e+03      44      85 ..     184     224 ..     182     236 .. 0.72
   2 ?    0.2   0.0     0.037   6.6e+02      26      50 ..     487     513 ..     472     522 .. 0.71
   3 ?   10.1   0.1     3e-05      0.54      79     119 .]     522     558 ..     513     558 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.19
  Exo_endo_phos_2  44 plWgsedtdssargeeLiefleehslsllnllksgptfkssn 85 
                      ++W + +++  ++   +++ +++++l+ +   k++  ++++n
       KHJ30457.1 184 KSWATVTRN-GQKKARVTQSTQSNKLEAIPVSKTKQSVSNKN 224
                      678886555.78999999999999999776655555555544 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.037
  Exo_endo_phos_2  26 selksp..kiiilGDfNakhplWgsed 50 
                       e ++p  ++i +GDf     +W+ e 
       KHJ30457.1 487 AEESTPapRTIAIGDFKSVYWAWQPEA 513
                      444444469*******99888887754 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 3e-05
  Exo_endo_phos_2  79 ptfkssngsstiDltltsdnlalskleleeedlgSDHrpil 119
                      pt++     +t+Dl + + + +   +   ee ++SDH+pi+
       KHJ30457.1 522 PTHHA---GNTLDLAWKNLKDTMA-WVSKEECITSDHLPIC 558
                      44433...589*******999999.778889********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (869 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       854  (0.0476323); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.27s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 5905.48
//
Query:       KHJ30458.1  [L=471]
Description: putative phd transcription [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-09   37.4   9.7    1.8e-09   37.4   9.7    2.2  2  PHD       PHD-finger


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   9.7   9.8e-14   1.8e-09       1      51 [.     113     162 ..     113     163 .. 0.95
   2 ?   -1.9   0.2      0.18   3.3e+03      25      35 ..     304     314 ..     303     323 .. 0.72

  Alignments for each domain:
  == domain 1  score: 37.4 bits;  conditional E-value: 9.8e-14
                 SBTTTTSTTSTTSCEEEETT.TSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   1 rCavCkkksdeeeelvqCdg.CkrwfHqkClkppleseekpegewlCekCke 51 
                 +C +C++  d+++ +v C+g Ck+w+H +C+++++e++++  ++++C+kC++
  KHJ30458.1 113 YC-ICRG-PDDHGMMVNCEGpCKDWYHCSCVGIDVEDARELLDRYVCPKCSS 162
                 69.****.***********88****************999999*******86 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.18
                 EETTTSSSTHS CS
         PHD  25 fHqkClkpple 35 
                  H +C +++  
  KHJ30458.1 304 IHEYCKSISSH 314
                 69999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (471 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       807  (0.0450109); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3369.86
//
Query:       KHJ30459.1  [L=668]
Description: putative secreted effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (668 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1476  (0.0823247); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 4751.02
//
Query:       KHJ30460.1  [L=344]
Description: putative 2og-fe oxygenase family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.7e-31  107.5   0.0    1.7e-30  106.7   0.0    1.5  1  2OG-FeII_Oxy_2  2OG-Fe(II) oxygenase superfamily
  ------ inclusion threshold ------
       0.17   11.4   0.0        3.8    7.0   0.0    2.7  2  Oxygenase-NA    Oxygenase, catalysing oxidative methylation o


Domain annotation for each model (and alignments):
>> 2OG-FeII_Oxy_2  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.7   0.0   1.9e-34   1.7e-30      15     196 .]     152     340 ..     105     340 .. 0.86

  Alignments for each domain:
  == domain 1  score: 106.7 bits;  conditional E-value: 1.9e-34
  2OG-FeII_Oxy_2  15 aellrelleegpfrqptilggkrvsvqqtllgplgwatdgpgyrysekesvdakplspfpeallrlverlvkaagpegwspnaalvnfYrdgari 109
                     ++ ++e     +f+++  + +k ++ ++ l+++l+w t+g +y++s+k  +   ++++fp+++  l+  l     +++ +p+aa+vn Y++g+ +
      KHJ30460.1 152 RSFFSENPLNLQFYSKDKNPKKNLDCRKALQKKLRWITLGGQYDWSRK-DYPLGNAPKFPSDISSLIVGL-----FPNIQPQAAIVNLYSPGDTL 240
                     4444444444445555555566677789999***************99.9****************9999.....79****************** PP

  2OG-FeII_Oxy_2 110 glHqDkeesaleapivSlSLGasatfrfgkesree...eiiailLesGdllvmggesrkayHgvprikkdtapele...........leelrtrR 190
                     +lH+D +e+ ++  +vS+SLG+sa+f +g + +e+   +   + L+sGd+++m+ esr a+Hgvp i ++t pe++            +   ++R
      KHJ30460.1 241 SLHRDVSEK-VDRGLVSISLGCSAYFIIGVQDEETmetKSEVLYLHSGDVVCMTEESRFAWHGVPLIIENTCPEYLsdwpgeefpawKKWISQKR 334
                     *******99.******************96554444449999****************************999999999999999*9888899** PP

  2OG-FeII_Oxy_2 191 inlTfR 196
                     +nl++R
      KHJ30460.1 335 VNLNVR 340
                     ****99 PP

>> Oxygenase-NA  Oxygenase, catalysing oxidative methylation of damaged DNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0     0.096   8.6e+02      11      53 ..     114     158 ..     111     170 .. 0.79
   2 ?    7.0   0.0   0.00042       3.8      36     137 ..     203     297 ..     161     302 .. 0.66

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.096
  Oxygenase-NA  11 pelvae..lrealypklapiAnrwaeklglearypeeleeflaec 53 
                   p+++++  l + l++ l +  ++ + +l+ + +yp+e ++f +e+
    KHJ30460.1 114 PPIIQKelLSRLLHRDLSNPEHNTNLHLHYNISYPAEKRSFFSEN 158
                   6666543367778889999999999999999****9999998876 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.00042
  Oxygenase-NA  36 lglearypeeleeflaechaagqerptplllkyeegdynaLHqdlyGelvFPlqvvilLsepgedftGGefvl.veqrpraqsraevvkleqGdali 131
                   lg++ ++p++ ++++     + q + ++++  y++gd  +LH+d+  ++   l v i L           f++ v+++  + +++ev+ l+ Gd++ 
    KHJ30460.1 203 LGNAPKFPSDISSLIVGLFPNIQPQ-AAIVNLYSPGDTLSLHRDVSEKVDRGL-VSISLGCSA-Y-----FIIgVQDEETMETKSEVLYLHSGDVVC 291
                   6677777777777777777766665.456777888888888888876555444.444444332.2.....333267778889999999999999999 PP

  Oxygenase-NA 132 fatreR 137
                   ++ ++R
    KHJ30460.1 292 MTEESR 297
                   988877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       299  (0.0166769); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2708.50
//
Query:       KHJ30461.1  [L=334]
Description: putative cell division control protein 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-71  240.6   0.0    2.3e-71  240.3   0.0    1.1  1  Pkinase        Protein kinase domain
    2.5e-30  105.6   0.0    3.4e-30  105.2   0.0    1.1  1  Pkinase_Tyr    Protein tyrosine kinase
    0.00029   19.9   0.0      0.015   14.2   0.0    2.1  2  Haspin_kinase  Haspin like kinase domain
     0.0053   16.1   0.0      0.011   15.0   0.0    1.5  1  Kinase-like    Kinase-like
  ------ inclusion threshold ------
      0.022   14.7   0.1      0.038   13.9   0.1    1.3  1  APH            Phosphotransferase enzyme family
      0.051   12.6   0.0      0.078   12.0   0.0    1.2  1  Seadorna_VP7   Seadornavirus VP7


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.3   0.0   7.7e-75   2.3e-71       1     264 []       4     310 ..       4     310 .. 0.93

  Alignments for each domain:
  == domain 1  score: 240.3 bits;  conditional E-value: 7.7e-75
                 EEEEEEEEEESSEEEEEEEE.TTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE.SSEEEEEEE--TTEBHHHHHH....... CS
     Pkinase   1 yekleklGeGsfGkVykave.ketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee.kdelylvleyveggeladlle....... 90 
                 y+klek+GeG++G+Vyka++ +++++ivA+Kki+ e +++   ++++rEi++lk+++ pnivrl+++++   ++lylv+e+++ + l++++e       
  KHJ30461.1   4 YQKLEKIGEGTYGVVYKARDlSHNSRIVALKKIRLEAEDEGVPSTAIREISLLKEMNDPNIVRLLNIVHAdGHKLYLVFEFLDLD-LKKYMEalpvsdg 101
                 7999***************9346789*****************************************99746789********77.9999988888888 PP

                 .HHSS--HH.............HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHH.TTSC CS
     Pkinase  91 .rkgslsee.............eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvl.kene 173
                  r ++l+e               +kk+++q++eg++y+H+++++HrDlKp+N+Lid++g+lK++DFGla+ +    + +t++v+t +Y++PE+l ++++
  KHJ30461.1 102 gRGKALPEGsgpdlgrlglgdaMVKKFMSQLCEGVRYCHCHRVLHRDLKPQNLLIDREGNLKLADFGLARAFGVPLRtYTHEVVTLWYRSPEILlGGRQ 200
                 76666777688899999999889*************************************************988777****************9**** PP

                 BSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS.........................-HHHHHHHHHHT- CS
     Pkinase 174 yskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilg.etkeklpeasei.........................seeakdllkkllk 246
                 ys+ vD+Ws+G+i++e+ t+kp+f+   g++    e+d+++ki+++lg +t+ ++p   +                          +e+ +dll+++l 
  KHJ30461.1 201 YSTGVDMWSVGCIFAEMCTRKPLFP---GDS----EIDEIFKIFRLLGtPTEADWPGVMDKscfpdfkssfpkwirdesqplcdglDEKGLDLLEQMLV 292
                 *************************...666....8999999*****98788888887776789*********************************** PP

                 SSGCCSTTHHHHHTSGGG CS
     Pkinase 247 kdpkkRltaeellqhpyl 264
                 +dp  R++a++++qhpy+
  KHJ30461.1 293 YDPAGRISAKQACQHPYF 310
                 *****************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.2   0.0   1.1e-33   3.4e-30       4     201 ..       7     220 ..       4     236 .. 0.90

  Alignments for each domain:
  == domain 1  score: 105.2 bits;  conditional E-value: 1.1e-33
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH.HHHHHHHHHHHHTS-BTTB--EEEEEE.SSSSEEEEEE--TTEBHHHHHHHT.... CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee.keelleeakimkklkhpnivkllgvct.keepllivteyvkgGdLlkfLrkk.... 95 
                   +k+GeG++G V++++     ++++  Va+K+++ ea++e   +  ++e++++k+++ pniv+ll ++  ++++l++v+e+++  dL+k++++     
   KHJ30461.1   7 LEKIGEGTYGVVYKARDL---SHNSRIVALKKIRLEAEDEGvPSTAIREISLLKEMNDPNIVRLLNIVHaDGHKLYLVFEFLDL-DLKKYMEALpvsd 100
                  689************998...888999******88777776478899*********************978888********98.9*******9**** PP

                  ...............CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHH CS
  Pkinase_Tyr  96 ...............ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslk 178
                                  +  l    + +f+ q+++G++y + ++++Hrdl  +N L++++   k++DfGLar+       ++ +++ + + + +pE+l 
   KHJ30461.1 101 ggrgkalpegsgpdlGRLGLGDAMVKKFMSQLCEGVRYCHCHRVLHRDLKPQNLLIDREGNLKLADFGLARAF--GVPLRTYTHEVVTLWYRSPEILL 196
                  *************66566666667789**********************************************..66667778888999999***987 PP

                  HSE.EEHHHHHHHHHHHHHHHHTT CS
  Pkinase_Tyr 179 ekk.ftsksDvWsfGvllwEiftl 201
                   ++ +++  D+Ws G +  E++t 
   KHJ30461.1 197 GGRqYSTGVDMWSVGCIFAEMCTR 220
                  6555*****************994 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.7   0.0    0.0083        25     103     142 ..       5      47 ..       1      85 [. 0.68
   2 !   14.2   0.0   5.1e-06     0.015     230     263 ..     146     184 ..     142     204 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.0083
  Haspin_kinase 103 asllndseklssevyqtke...kdkevvlKviplevledvtis 142
                    ++l + +e+ ++ vy++++   +++ v+lK+i le+ ++   s
     KHJ30461.1   5 QKLEKIGEGTYGVVYKARDlshNSRIVALKKIRLEAEDEGVPS 47 
                    4444559999999***998877889999******776663332 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 5.1e-06
  Haspin_kinase 230 HRdLhldniLvdknlnvtlidlklsRle.....ssegkv 263
                    HRdL+ +n L+d+++n  l d+ l+R+      + +++v
     KHJ30461.1 146 HRDLKPQNLLIDREGNLKLADFGLARAFgvplrTYTHEV 184
                    **************************9766665444444 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   3.7e-06     0.011     157     262 ..     136     235 ..     122     248 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 3.7e-06
  Kinase-like 157 aanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvl...sevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPlt 251
                  + + + + ++h +++++nll d++g l+l +f+  +  g   +      v   +  pE+l   g        +++ ++d W +G  i+   c   Pl 
   KHJ30461.1 136 VRYCHCHRVLHRDLKPQNLLIDREGNLKLADFGLARAFGVPLRTythEVVTLWYRSPEILLG-G-------RQYSTGVDMWSVGC-IFAEMCTRKPLF 224
                  667788899***********************988777866664211333467899998876.2.......37899********5.888889988887 PP

  Kinase-like 252 lateeakeewk 262
                     +e+ e +k
   KHJ30461.1 225 PGDSEIDEIFK 235
                  77777776664 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1   1.3e-05     0.038     167     197 ..     143     171 ..     140     190 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.3e-05
                 EEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 167 vllHgDlhpgNllvdpddgrvtGviDfedag 197
                 ++lH+Dl+p+Nll+d +++    + Df++a+
  KHJ30461.1 143 RVLHRDLKPQNLLIDREGNLK--LADFGLAR 171
                 689************444444..88888886 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.6e-05     0.078     162     186 ..     142     166 ..     123     171 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.6e-05
  Seadorna_VP7 162 tnllhGDcnpenlmcDknGylklvD 186
                   + +lh D +p+nl+ D+ G+lkl D
    KHJ30461.1 142 HRVLHRDLKPQNLLIDREGNLKLAD 166
                   578********************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2373.11
//
Query:       KHJ30462.1  [L=93]
Description: putative 60s ribosomal protein l37 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.5e-28   96.6  10.7    1.1e-27   95.9  10.7    1.4  1  Ribosomal_L37e  Ribosomal protein L37e
  ------ inclusion threshold ------
      0.014   15.4   1.0      0.022   14.8   1.0    1.3  1  DZR             Double zinc ribbon
      0.073   13.1   0.4      0.097   12.7   0.4    1.1  1  HypA            Hydrogenase/urease nickel incorporation, meta
       0.13   11.7   0.7       0.17   11.3   0.7    1.1  1  DUF1258         Protein of unknown function (DUF1258)
       0.23   11.2   7.4       0.75    9.6   0.1    2.5  2  Ribosomal_S14   Ribosomal protein S14p/S29e


Domain annotation for each model (and alignments):
>> Ribosomal_L37e  Ribosomal protein L37e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.9  10.7   3.1e-31   1.1e-27       1      54 []       2      54 ..       2      54 .. 0.98

  Alignments for each domain:
  == domain 1  score: 95.9 bits;  conditional E-value: 3.1e-31
  Ribosomal_L37e  1 tkGtssfGkrqkkktHilCrrCgkrsyhvqkktCascGypsaklrkynWsaKak 54
                    tkGtssfGkr ++ktH+lCrrCg+r+ h+qk+tCa+cGyp+ak+rkynW++Kak
      KHJ30462.1  2 TKGTSSFGKR-HNKTHTLCRRCGRRALHIQKHTCAACGYPAAKIRKYNWGEKAK 54
                    8*********.*****************************************96 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   1.0   6.2e-06     0.022       9      38 ..      13      41 ..       7      47 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 6.2e-06
         DZR  9 ppdarfCseCgtk.lkavaaedrCpsCgekv 38
                ++    C +Cg + l    ++++C +Cg+++
  KHJ30462.1 13 NKTHTLCRRCGRRaL--HIQKHTCAACGYPA 41
                555667888888842..23478888888875 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.4   2.7e-05     0.097      67     100 ..      13      45 ..       4      50 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.7e-05
                 E--EEEETTTS-EEECHHHHHS-TTTSSS-EEEE CS
        HypA  67 vpvkvrCreCgkefeleekalrCpkCgsadveiv 100
                  + ++ Cr+Cg++  + +k  +C +Cg    +i 
  KHJ30462.1  13 NKTHTLCRRCGRRALHIQK-HTCAACGYPAAKIR 45 
                 677899*****99885544.68*****9888775 PP

>> DUF1258  Protein of unknown function (DUF1258)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.7   4.8e-05      0.17       9      41 ..       9      43 ..       4      50 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 4.8e-05
     DUF1258  9 kkknfsthkfcnkcGkvvaksek..celcggkvak 41
                 k +  th++c +cG+ + + +k  c  cg + ak
  KHJ30462.1  9 GKRHNKTHTLCRRCGRRALHIQKhtCAACGYPAAK 43
                5677789*********9877654339999977665 PP

>> Ribosomal_S14  Ribosomal protein S14p/S29e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   2.7    0.0075        27      11      29 ..      12      30 ..       6      32 .. 0.78
   2 ?    9.6   0.1   0.00021      0.75      15      32 ..      31      48 ..      27      57 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0075
                   .CTTT---SSS--SSSEE- CS
  Ribosomal_S14 11 ptrirnrCrvtGrprGvir 29
                    ++ ++ Cr +Gr+   i+
     KHJ30462.1 12 HNKTHTLCRRCGRRALHIQ 30
                   4788999******976665 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00021
                   T---SSS--SSSEE-GGG CS
  Ribosomal_S14 15 rnrCrvtGrprGvirkfg 32
                   ++ C+ +G p + irk++
     KHJ30462.1 31 KHTCAACGYPAAKIRKYN 48
                   789*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       681  (0.0379832); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 681.44
//
Query:       KHJ30463.1  [L=742]
Description: putative aaa family atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.4e-54  181.7   0.1    8.9e-38  129.7   0.0    2.7  2  AAA              ATPase family associated with various cellul
    5.9e-12   45.2   1.9    5.5e-09   35.7   0.2    2.7  2  AAA_lid_3        AAA+ lid domain
      7e-08   33.0   1.2      0.012   16.0   0.3    4.3  3  AAA_16           AAA ATPase domain
    9.8e-07   28.8   0.2     0.0026   17.8   0.0    3.7  3  AAA_5            AAA domain (dynein-related subfamily)
    3.3e-06   27.2   0.0     0.0017   18.4   0.0    2.5  2  AAA_14           AAA domain
    4.5e-05   23.7   1.8       0.78   10.0   0.7    4.4  4  AAA_22           AAA domain
    5.1e-05   23.1   0.0     0.0094   15.7   0.0    3.1  3  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
     0.0001   22.5   0.1       0.01   16.0   0.0    2.8  2  AAA_2            AAA domain (Cdc48 subfamily)
    0.00011   22.6   0.0       0.93    9.9   0.0    3.0  2  RNA_helicase     RNA helicase
    0.00017   21.1   0.0       0.18   11.3   0.0    2.7  3  AAA_7            P-loop containing dynein motor region
     0.0012   18.2   0.0       0.12   11.7   0.0    2.6  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
     0.0032   17.1   5.3        2.5    7.7   0.1    4.0  4  AAA_25           AAA domain
  ------ inclusion threshold ------
       0.01   16.0   0.0      0.061   13.5   0.0    2.3  1  CDC48_N          Cell division protein 48 (CDC48), N-terminal
      0.011   15.4   0.1        2.6    7.6   0.2    2.9  2  Zot              Zonular occludens toxin (Zot)
      0.017   14.9   0.3        3.9    7.2   0.1    2.5  2  IstB_IS21        IstB-like ATP binding protein
      0.022   14.8   0.0        1.3    9.1   0.0    2.4  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
      0.023   14.4   0.0        2.2    8.0   0.0    3.1  2  Sigma54_activat  Sigma-54 interaction domain
      0.031   14.5   0.0       0.75    9.9   0.0    2.4  2  AAA_33           AAA domain
      0.033   14.1   0.1       0.64    9.9   0.0    3.0  3  NACHT            NACHT domain
      0.033   13.5   0.1        2.7    7.3   0.0    3.1  3  ATPase           KaiC
      0.034   14.0   0.0       0.34   10.8   0.0    2.3  2  Rad17            Rad17 P-loop domain
       0.04   13.9   0.0       0.15   12.1   0.0    1.9  1  Vps4_C           Vps4 C terminal oligomerisation domain
      0.043   13.1   0.4       0.47    9.6   0.0    2.2  2  KAP_NTPase       KAP family P-loop domain
      0.044   13.0   0.0       0.52    9.5   0.0    2.3  2  TIP49            TIP49 P-loop domain
      0.071   12.3   0.0       0.49    9.5   0.0    2.1  2  DUF815           Protein of unknown function (DUF815)
      0.077   11.8   0.1          3    6.6   0.0    2.3  2  DUF2791          P-loop Domain of unknown function (DUF2791)
       0.08   13.3   0.1        3.3    8.0   0.0    3.2  4  AAA_19           AAA domain
       0.11   12.7   0.0        3.6    7.8   0.0    2.7  3  AAA_28           AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.2     1e-15   6.4e-13       1     130 [.     252     374 ..     252     376 .. 0.81
   2 !  129.7   0.0   1.4e-40   8.9e-38       1     131 [.     513     642 ..     513     643 .. 0.97

  Alignments for each domain:
  == domain 1  score: 49.3 bits;  conditional E-value: 1e-15
                 EEEESSTTSSHHHHHHHHHHH.HTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTT CS
         AAA   1 vllyGppGtGKTllakavake.lgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkk 98 
                 vll+G  GtGKT l++ +++  + +++++is  +         ++ ir +f++a++++ psi++iDE++++++++    ++ ++ +   + +eld++++
  KHJ30463.1 252 VLLHGAHGTGKTFLINKIINCgWTQNIFRISIDSK--------PSTIRTIFADARNSQ-PSIIVIDELESIVSKE----DTTSQVITRIIGEELDNLSQ 337
                 79*****************9856799999998665........599*********998.***************9....33444444444444444444 PP

                 S....SSTEEEEEEESSGGGSTHHHHS.TTSSEEEET CS
         AAA  99 k....eskvivigatnrpdkldpallr.gRfdrkiei 130
                        +++v++at + ++++  l + gR+  +i +
  KHJ30463.1 338 AssrfLPRILVLTATLHASNIPLTLKKrGRIRTEILL 374
                 444468889*****************77999988865 PP

  == domain 2  score: 129.7 bits;  conditional E-value: 1.4e-40
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 +llyGppG+ KTl a+a+a+e++++f+ ++g+ell++yvgese+ ir++f++a++ + psi+f+DEi++++++r+++ + ++  v+ +Ll+e+dg +  
  KHJ30463.1 513 LLLYGPPGCSKTLSAQAMATEIDFNFFAVKGAELLNMYVGESERAIRDVFARARAAS-PSIIFFDEIESIGSQREKNGRVNSVHVLTTLLNEMDGIEAL 610
                 69*****************************************************99.****************999*********************7 PP

                 SSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA 100 eskvivigatnrpdkldpallr.gRfdrkieie 131
                 ++ v+v++atn+p+ ld allr gRfd+ ++++
  KHJ30463.1 611 KD-VTVLAATNQPQVLDLALLRpGRFDKLLYVG 642
                 55.************************999875 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.1     0.003       1.9       4      33 ..     402     431 ..     400     452 .. 0.81
   2 !   35.7   0.2   8.5e-12   5.5e-09       1      43 [.     665     712 ..     665     714 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.003
   AAA_lid_3   4 lkeLAerTeGySGADlaalcreAallAlrr 33 
                 l++L  rT+ y+  Dl++l ++A   A +r
  KHJ30463.1 402 LERLGDRTHAYTAEDLVSLLDAACEIAEER 431
                 78999******************9988665 PP

  == domain 2  score: 35.7 bits;  conditional E-value: 8.5e-12
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgik.....eitmedf 43 
                 dvd+ e+A++TeGySGA+l+ +c  A  + ++ ++      ++ m+d+
  KHJ30463.1 665 DVDICEIARLTEGYSGAELVGICETACDEVMEKCEMtgvelQVQMKDI 712
                 9**************************999988533222224777776 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.3   1.9e-05     0.012      22      46 ..     247     271 ..     241     456 .. 0.80
   2 !    9.4   0.0     0.002       1.3      18      49 ..     504     535 ..     497     565 .. 0.80
   3 ?    0.6   0.0      0.99   6.3e+02     122     149 ..     557     583 ..     550     616 .. 0.73

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.9e-05
      AAA_16  22 grpelvllsGesGvGKsslvrellr 46 
                 +r+++vll+G+ G+GK+ l++++ +
  KHJ30463.1 247 QRSCAVLLHGAHGTGKTFLINKIIN 271
                 56689***************99865 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.002
      AAA_16  18 rvrsgrpelvllsGesGvGKsslvrellrale 49 
                 r+ ++    +ll+G++G+ K+  +++ ++++ 
  KHJ30463.1 504 RIGASARKGLLLYGPPGCSKTLSAQAMATEID 535
                 455555589****************9999886 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.99
      AAA_16 122 llkrllallsrderplvlvlDdlqwade 149
                 ++++ +a+++  ++p ++++D+++ + +
  KHJ30463.1 557 AIRDVFARARA-ASPSIIFFDEIESIGS 583
                 56667788888.8899*****9996554 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0     0.012       7.9       2      19 ..     252     269 ..     251     288 .. 0.83
   2 ?   -1.5   0.0       3.6   2.3e+03      64      77 ..     298     313 ..     274     323 .. 0.75
   3 !   17.8   0.0     4e-06    0.0026       2     124 ..     513     623 ..     512     632 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.012
                 EEEE--SSSSHHHHHHHG CS
       AAA_5   2 vlLvGppGtgKselaerl 19 
                 vlL G+ GtgK++l+ ++
  KHJ30463.1 252 VLLHGAHGTGKTFLINKI 269
                 89************9877 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 3.6
                 -..G-SEEEEESGGG- CS
       AAA_5  64 r..egeilvlDEvera 77 
                 r  +++i+v+DE+e +
  KHJ30463.1 298 RnsQPSIIVIDELESI 313
                 246789******9965 PP

  == domain 3  score: 17.8 bits;  conditional E-value: 4e-06
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------G-SEEEEESGGG--..HHHHHHHHHHHHSSEEE..- CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEverae..sevlnsLlslleerrlllee 98 
                 +lL GppG+ K+  a+ +a  +  +++ v + +      l+  +   +++++ +d  +   a +++i+++DE+e +   +e  ++++s+    +l l+e
  KHJ30463.1 513 LLLYGPPGCSKTLSAQAMATEIDFNFFAVKGAE------LLNMYV-GESERAIRDVFARARAASPSIIFFDEIESIGsqREKNGRVNSVHVLTTL-LNE 603
                 89***************************9987......555554.57777788888888888***********987433444444443333333.344 PP

                 SSSEEE---......-EEEEEESS-- CS
       AAA_5  99 ggelvkaknddllerfrviatanpld 124
                 +++ +  k       ++v+a++n+++
  KHJ30463.1 604 MDGIEALKD------VTVLAATNQPQ 623
                 444444443......66666666655 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   2.6e-06    0.0017       4      81 ..     251     318 ..     248     343 .. 0.75
   2 ?    6.2   0.0     0.015       9.8       3      76 ..     511     581 ..     509     608 .. 0.70

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 2.6e-06
      AAA_14   4 ilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqevpewek 81 
                 ++++ Ga  +GKT+l++++i+      ++i+ i++d+++ +  +      +++ +  ++++ +++++DE   + + e+
  KHJ30463.1 251 AVLLHGAHGTGKTFLINKIINCGW--TQNIFRISIDSKPSTI-R------TIFADA-RNSQPSIIVIDELESIVSKED 318
                 6899****************8877..89*********87753.2......344443.3447899*****998844444 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.015
      AAA_14   3 kilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 k l++ G+  + KT  ++ ++ e      +++ ++  +  +    ++e+ ++ +++++++   +++f+DEi  +
  KHJ30463.1 511 KGLLLYGPPGCSKTLSAQAMATEID---FNFFAVKGAELLNMYVGESERAIRDVFARARAASPSIIFFDEIESI 581
                 5678999999999999877775544...555555555554444444544454444444445889*******987 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.7    0.0012      0.78       8      66 ..     252     316 ..     247     355 .. 0.62
   2 ?   -1.3   0.0       3.7   2.3e+03      55      85 ..     396     424 ..     388     432 .. 0.83
   3 ?    6.8   0.0     0.012       7.5       6      29 ..     511     534 ..     505     565 .. 0.81
   4 ?   -1.6   0.0       4.7     3e+03      85     105 ..     561     585 ..     550     610 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0012
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaee........erpevvfvtlpsstsskdllrellralgl 66 
                 ++++G  GtGKT+l++++ +    + +              +++f ++ +s  s  +  el +++  
  KHJ30463.1 252 VLLHGAHGTGKTFLINKIINCG--WTQNIFrisidskpSTIRTIFADARNSQPSIIVIDELESIVSK 316
                 689**************99854..2222224467744444444477777766555555555555553 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 3.7
      AAA_22  55 dllrellralglelkaerlsseellealeqa 85 
                 ++++e+l+ lg++++a   + e+l+++l  a
  KHJ30463.1 396 EIYEEVLERLGDRTHA--YTAEDLVSLLDAA 424
                 7999*******99999..8888888877655 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.012
      AAA_22   6 gilvvtGesGtGKTtllrrlleql 29 
                 + l+++G++G+ KT++++ ++ + 
  KHJ30463.1 511 KGLLLYGPPGCSKTLSAQAMATEI 534
                 6689**************998876 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 4.7
      AAA_22  85 alrarav..ielliiDEaqhlr..s 105
                  + ++++  ++++  DE++ +   +
  KHJ30463.1 561 VFARARAasPSIIFFDEIESIGsqR 585
                 44444445679999****9996431 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.086        55      35      94 ..     251     311 ..     243     365 .. 0.75
   2 !   15.7   0.0   1.5e-05    0.0094       6      69 ..     475     546 ..     468     587 .. 0.66
   3 ?   -1.5   0.0         3   1.9e+03      26      45 ..     628     647 ..     615     660 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.086
      RuvB_N  35 hvllyGpPGlGkttla.kiiakelgvklkitsgPvlekagdlaalltnleek..dvlfideih 94 
                  vll+G+ G Gkt l  kii      ++   s  + +k++ + +++++ +++   ++ ide+ 
  KHJ30463.1 251 AVLLHGAHGTGKTFLInKIINCGWTQNIFRIS--IDSKPSTIRTIFADARNSqpSIIVIDELE 311
                 59***********9861577666665554444..33456666666655544311466677665 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 1.5e-05
      RuvB_N   6 leeyigqekvkeklkifieaakkree........aldhvllyGpPGlGkttlakiiakelgvklkitsgPvl 69 
                 +++  gq++vk+ l+ +ie+  +  e        a   +llyGpPG  kt  a+ +a+e++ ++ +  g  l
  KHJ30463.1 475 WDQIGGQDDVKKALRRAIETPLQYPErmkrigasARKGLLLYGPPGCSKTLSAQAMATEIDFNFFAVKGAEL 546
                 566778999999999999887654440001111144568**********************99877776544 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 3
      RuvB_N  26 akkreealdhvllyGpPGlG 45 
                 a  r    d +l +GpP l 
  KHJ30463.1 628 ALLRPGRFDKLLYVGPPNLA 647
                 66788889*********984 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1      0.14        87      64      89 ..     297     322 ..     249     332 .. 0.81
   2 !   16.0   0.0   1.6e-05      0.01       7     105 ..     514     606 ..     510     613 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.14
                 HHHHTTSEEEEETGGG---------- CS
       AAA_2  64 vgaeegGivllDEidKihpkessgad 89 
                  +  +  i+ +DE++ i +ke ++++
  KHJ30463.1 297 ARNSQPSIIVIDELESIVSKEDTTSQ 322
                 4556777999*****99997444444 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 1.6e-05
                 EEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTSEEEEETGGG-------------HHHHHHHHHHHH- CS
       AAA_2   7 lllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEidKihpkessgadvSregVqrdLLqileg 105
                 ll gp g+ kt+ a+a+a  ++     ++  +   ell         +r i    +  +a+   i+++DEi+ i ++++++  v +  V++ LL+ ++g
  KHJ30463.1 514 LLYGPPGCSKTLSAQAMATEIDF----NFFAVKGAELLN--MYVGESERAIRDVFARARAASPSIIFFDEIESIGSQREKNGRVNSVHVLTTLLNEMDG 606
                 67889999999999999988886....444444445554..12222344444455566677777*************9999999999*******98887 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0    0.0021       1.3       1      66 [.     252     319 ..     252     334 .. 0.62
   2 !    9.9   0.0    0.0015      0.93       2      68 ..     514     571 ..     513     599 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0021
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvys..rnpeddfwdgYt.gqevvvidDfgqvkdee.n 66 
                   ++l+G++g+GK+ l++++++   ++   + + s+ s   + ++ f d  + ++ ++vid++ +++++e +
    KHJ30463.1 252 VLLHGAHGTGKTFLINKIINCGWTQN--IFRISIDSkpSTIRTIFADARNsQPSIIVIDELESIVSKEdT 319
                   689**************887544333..222333331022345566766656667777888877766433 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0015
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqevvvidDfgqvkdeenps 68 
                   +lyGp+g+ K++ a+ +a+++          +++   +  + +++Y g+    i D+ ++   ++ps
    KHJ30463.1 514 LLYGPPGCSKTLSAQAMATEID--------FNFF-AVKGAELLNMYVGESERAIRDVFARARAASPS 571
                   79**************887776........2332.24566666666666666666666655444555 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   0.00028      0.18      31      57 ..     247     273 ..     241     296 .. 0.78
   2 !    6.7   0.0    0.0073       4.7      31      58 ..     508     535 ..     501     550 .. 0.85
   3 ?   -3.1   0.0       7.5   4.8e+03     144     159 ..     608     623 ..     603     624 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00028
       AAA_7  31 knkkpvllvGptGtGKtviikdllkkl 57 
                 +++  vll G  GtGKt +i+++++  
  KHJ30463.1 247 QRSCAVLLHGAHGTGKTFLINKIINCG 273
                 67789****************988754 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0073
       AAA_7  31 knkkpvllvGptGtGKtviikdllkkld 58 
                 +++k +ll+Gp G++Kt+ ++ + +++d
  KHJ30463.1 508 SARKGLLLYGPPGCSKTLSAQAMATEID 535
                 678999***************9998887 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 7.5
       AAA_7 144 keikdvqlvaamgppg 159
                 + +kdv+++aa ++p+
  KHJ30463.1 608 EALKDVTVLAATNQPQ 623
                 5799********9985 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.067        43      24      42 ..     251     269 ..     245     272 .. 0.87
   2 !   11.7   0.0   0.00019      0.12      15      43 ..     503     531 ..     497     536 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.067
  Mg_chelatase  24 nlllvGppGsGKtmlakrl 42 
                    +ll G+ G+GKt l++++
    KHJ30463.1 251 AVLLHGAHGTGKTFLINKI 269
                   589***********99887 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00019
  Mg_chelatase  15 leiaaaGgHnlllvGppGsGKtmlakrlp 43 
                    +i a+ +  lll+GppG+ Kt+ a++++
    KHJ30463.1 503 KRIGASARKGLLLYGPPGCSKTLSAQAMA 531
                   5788999999****************986 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.1    0.0039       2.5      29      50 ..     245     266 ..     213     273 .. 0.86
   2 ?    3.2   0.1      0.09        58     129     176 ..     289     336 ..     274     340 .. 0.75
   3 ?    5.0   0.0     0.024        16      36      56 ..     513     533 ..     491     535 .. 0.88
   4 ?    0.2   0.0      0.73   4.7e+02     127     185 ..     555     617 ..     535     619 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0039
      AAA_25  29 llpagelallaGapgtGKttla 50 
                 +  +   +ll Ga+gtGKt+l 
  KHJ30463.1 245 WAQRSCAVLLHGAHGTGKTFLI 266
                 66667789************96 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.09
      AAA_25 129 dvdaleaaieevegvrlvviDplsralggdensnsdv.galvealeria 176
                  ++ + a+++   ++  +viD l ++++ + + +  + + + e l++++
  KHJ30463.1 289 TIRTIFADARN-SQPSIIVIDELESIVSKEDTTSQVItRIIGEELDNLS 336
                 56677888888.78***********999955544444366777777765 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.024
      AAA_25  36 allaGapgtGKttlaldlala 56 
                  ll+G+pg+ Kt  a  +a +
  KHJ30463.1 513 LLLYGPPGCSKTLSAQAMATE 533
                 68*************999975 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.73
      AAA_25 127 tadvdaleaaieevegvrlvviDplsralgg.densnsd....v.galvealeriarrtgaavll 185
                 +++++++ a++++ + +  + +D + ++ +  ++n        v + l++ ++ i++ ++++vl+
  KHJ30463.1 555 ERAIRDVFARARA-ASPSIIFFDEIESIGSQrEKNGR-VnsvhVlTTLLNEMDGIEALKDVTVLA 617
                 5678899999999.78*********999888433333.335554699999999999999999986 PP

>> CDC48_N  Cell division protein 48 (CDC48), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   9.5e-05     0.061      13      83 ..      31     108 ..      24     110 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 9.5e-05
                 STTEEEE-HHHHHHHTS-TTSEEEEEC.CC......CEEEEEEEBSTTSTTTTEEEE-HHHHHHHT--TTEEEEEEEE CS
     CDC48_N  13 grgivridpedmeelglepgdvveieg.kr......kTvaivwpaepedegkgiIrmdgvtRknagvsiGdkVtVrka 83 
                 g ++v++ +e++ +l+l pg+v  +++ ++      k  ai+wp +++  +k ++++++   + +g ++Gd V +++a
  KHJ30463.1  31 GVSRVYLCKEVLTALKLDPGQVCYLSKiDEigspiqKREAIIWPTHEKNLSKRVVQVSKTFQEACGFKLGDNVLIEPA 108
                 567899999999999999999987765443111111346*******9988*************************997 PP

>> Zot  Zonular occludens toxin (Zot)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.2     0.004       2.6      54      99 ..     275     320 ..     247     339 .. 0.83
   2 ?    3.7   0.0     0.064        41      52     103 ..     541     592 ..     516     645 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.004
         Zot  54 tarliridnpegaetlkefakwatidkgallviDEcqeifpvrake 99 
                 t+++ ri++  +++t+  ++  a+  + +++viDE + i +++ + 
  KHJ30463.1 275 TQNIFRISIDSKPSTIRTIFADARNSQPSIIVIDELESIVSKEDTT 320
                 799*********************89***********999988775 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.064
         Zot  52 vstarliridnpegaetlkefakwatidkgallviDEcqeifpvrakegrkd 103
                 v+ a+l+++   e++  +  ++ +a+ +  +++++DE + i ++r k+gr  
  KHJ30463.1 541 VKGAELLNMYVGESERAIRDVFARARAASPSIIFFDEIESIGSQREKNGRVN 592
                 3467888888889999999999999999**************9999987733 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.1    0.0061       3.9      41      64 ..     243     266 ..     237     279 .. 0.88
   2 ?    5.1   0.0     0.027        17      46      70 ..     509     533 ..     505     549 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0061
   IstB_IS21  41 lsfiekkenivllGpsGvGKshla 64 
                  ++ +++ +++l G  G+GK++l 
  KHJ30463.1 243 VQWAQRSCAVLLHGAHGTGKTFLI 266
                 79********************96 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.027
   IstB_IS21  46 kkenivllGpsGvGKshlaialgve 70 
                 ++++++l Gp+G  K+  a a+++e
  KHJ30463.1 509 ARKGLLLYGPPGCSKTLSAQAMATE 533
                 56789*****************976 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0     0.002       1.3      19      41 ..     249     271 ..     228     286 .. 0.80
   2 ?    2.9   0.0      0.16     1e+02       8      48 ..     503     541 ..     493     557 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.002
                 TEEEEEEESTTSSHHHHHHHHHH CS
        TsaE  19 gdvilLeGdLGaGKTtlvrglak 41 
                 + ++lL+G  G+GKT l+ ++++
  KHJ30463.1 249 SCAVLLHGAHGTGKTFLINKIIN 271
                 4469***************9987 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.16
                 HHHHHHHHHCHTEEEEEEESTTSSHHHHHHHHHHHTT--..-- CS
        TsaE   8 ealgkklakalgdvilLeGdLGaGKTtlvrglakalgve..ev 48 
                 ++    +++++++ +lL+G+ G+ KT  ++++a +++++  +v
  KHJ30463.1 503 KR----IGASARKGLLLYGPPGCSKTLSAQAMATEIDFNffAV 541
                 33....444344589******************9988765555 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0    0.0034       2.2      18      44 ..     245     271 ..     239     287 .. 0.84
   2 ?    2.4   0.0      0.18   1.1e+02      23      45 ..     511     533 ..     492     627 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0034
                      HCTSSS-EEEECSTTSSHHHHHHHHHH CS
  Sigma54_activat  18 vaktdlsvlitGesGtGKellaraihe 44 
                       a+ ++ vl++G  GtGK++l ++i +
       KHJ30463.1 245 WAQRSCAVLLHGAHGTGKTFLINKIIN 271
                      5778899*************9988865 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.18
                      S-EEEECSTTSSHHHHHHHHHHH CS
  Sigma54_activat  23 lsvlitGesGtGKellaraihea 45 
                        +l+ G  G+ K+l a+a+ ++
       KHJ30463.1 511 KGLLLYGPPGCSKTLSAQAMATE 533
                      56778888888888888887553 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0    0.0012      0.75       2      46 ..     252     302 ..     252     353 .. 0.75
   2 ?    1.8   0.0      0.39   2.5e+02       3      29 ..     514     542 ..     513     588 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0012
      AAA_33   2 vllvGlpGsGKstlaerllkklg....avllssdt...lrrrlfgtdqqskt 46 
                 vll+G+ G+GK++l+ +++ + g     +++s d+    +r++f++ ++s+ 
  KHJ30463.1 252 VLLHGAHGTGKTFLINKII-NCGwtqnIFRISIDSkpsTIRTIFADARNSQP 302
                 799**************98.77778888888777666667777766665553 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.39
      AAA_33   3 llvGlpGsGKstlaerllkklg..avlls 29 
                 ll G+pG+ K+  a+ ++ + +  ++ + 
  KHJ30463.1 514 LLYGPPGCSKTLSAQAMATEIDfnFFAVK 542
                 688*********99999887765544444 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0     0.001      0.64       3      27 ..     252     276 ..     251     285 .. 0.85
   2 ?   -0.9   0.0       2.1   1.3e+03       4      24 ..     514     534 ..     512     536 .. 0.88
   3 ?   -2.4   0.0       5.9   3.8e+03      81     115 ..     569     603 ..     544     622 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.001
                 EEEEC-TTTCHHHHHHHHHHHHCTS CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaeg 27 
                 v+l+G+ G GKT L+ k++ + +++
  KHJ30463.1 252 VLLHGAHGTGKTFLINKIINCGWTQ 276
                 79****************9876655 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 2.1
                 EEEC-TTTCHHHHHHHHHHHH CS
       NACHT   4 ilqGeaGsGKTtLlqklalaw 24 
                 +l G++G+ KT  +q +a+++
  KHJ30463.1 514 LLYGPPGCSKTLSAQAMATEI 534
                 799*********999998875 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 5.9
                 CCEEEEEE-STT-SS-TCH.........HHHHHCT CS
       NACHT  81 erlLlilDglDelvtdlgqkekqpvrtlLselirk 115
                     + +D ++ + ++ +++++ ++ ++L++l+++
  KHJ30463.1 569 SPSIIFFDEIESIGSQREKNGRVNSVHVLTTLLNE 603
                 44456678888888777778888888888888876 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0    0.0043       2.7       7      64 ..     236     291 ..     231     298 .. 0.75
   2 ?   -1.0   0.0       1.4   9.3e+02     111     137 ..     293     320 ..     273     339 .. 0.67
   3 ?    1.7   0.0      0.21   1.3e+02      17      38 ..     508     529 ..     494     538 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0043
      ATPase   7 glDeilk.gGipegrvvlitGepGtGKtifalqFlikgaekygepgvfvtveepaedlr 64 
                 g+D+ +k +   +  +vl+ G  GtGKt++  + +  g  +   +   ++++++++ +r
  KHJ30463.1 236 GFDKEFKvQWAQRSCAVLLHGAHGTGKTFLINKIINCGWTQ---NIFRISIDSKPSTIR 291
                 66666641444556689***********9999888877555...777788888887776 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.4
      ATPase 111 laeaikeikakrvviDsitgl.ayeeke 137
                 +    ++ + + +viD ++++ ++e+++
  KHJ30463.1 293 IFADARNSQPSIIVIDELESIvSKEDTT 320
                 4444566777899999999995433333 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.21
      ATPase  17 pegrvvlitGepGtGKtifalq 38 
                   ++  l++G pG+ Kt+ a+ 
  KHJ30463.1 508 SARKGLLLYGPPGCSKTLSAQA 529
                 5677789**********98875 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.92   5.9e+02     128     144 ..     296     313 ..     209     358 .. 0.66
   2 ?   10.8   0.0   0.00054      0.34      45      70 ..     510     535 ..     488     586 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.92
       Rad17 128 dlr.tdkklilvedlPnk 144
                 d+r ++ ++i++++l + 
  KHJ30463.1 296 DARnSQPSIIVIDELESI 313
                 222023345555555433 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00054
       Rad17  45 kriLLisGPsGCgkstvvkvLskelg 70 
                 ++ LL+ GP+GC+k+   + ++ e  
  KHJ30463.1 510 RKGLLLYGPPGCSKTLSAQAMATEID 535
                 456999*********99999998765 PP

>> Vps4_C  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00023      0.15      26      57 ..     704     735 ..     694     737 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00023
      Vps4_C  26 ePpvtlkDflkalkkarptVskeDLekheeFT 57 
                 e +v++kD+++a++ +++ +s+e ++ +e++ 
  KHJ30463.1 704 ELQVQMKDIINAINLVKKQISPEMIASYERWA 735
                 779****************************6 PP

>> KAP_NTPase  KAP family P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00073      0.47      18      42 ..     247     271 ..     242     278 .. 0.90
   2 ?    0.9   0.1      0.34   2.2e+02     170     187 ..     296     315 ..     281     327 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00073
  KAP_NTPase  18 atpivvgLygkWGsGKssllnkled 42 
                 +++ +v L g+ G+GK++l+nk+++
  KHJ30463.1 247 QRSCAVLLHGAHGTGKTFLINKIIN 271
                 67899*****************975 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.34
  KAP_NTPase 170 a..lqkrlVvviDdLDrcet 187
                 +  ++++ ++viD+L+++ +
  KHJ30463.1 296 DarNSQPSIIVIDELESIVS 315
                 25688999********9755 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.51   3.2e+02      52      66 ..     251     265 ..     244     272 .. 0.85
   2 ?    9.5   0.0   0.00081      0.52      49      98 ..     509     556 ..     490     567 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.51
                 XXXXXXXXXXXXXXX CS
       TIP49  52 avLlaGpsgtGktal 66 
                 avLl G  gtGkt l
  KHJ30463.1 251 AVLLHGAHGTGKTFL 265
                 89**********977 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00081
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  49 aGravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkktev 98 
                 a +++Ll Gp+g  kt  a a++ e+     f a++g+e+  + v  +e 
  KHJ30463.1 509 ARKGLLLYGPPGCSKTLSAQAMATEID--FNFFAVKGAELLNMYVGESER 556
                 6799*********************97..99********99988887773 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00076      0.49      52     116 ..     248     310 ..     206     327 .. 0.79
   2 ?   -0.3   0.0      0.76   4.9e+02      24      77 ..     472     534 ..     453     578 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00076
      DUF815  52 pannvLLwGarGtGKSslvkallneyaeegLrlievekedlkelpklvellrerperfilfvDDL 116
                 ++  vLL Ga GtGK  l+  ++n   ++++  i ++ +  +++ ++++  r+++   i+++D L
  KHJ30463.1 248 RSCAVLLHGAHGTGKTFLINKIINCGWTQNIFRISIDSK-PSTIRTIFADARNSQP-SIIVIDEL 310
                 45579*******************999999888899876.4677888888776554.46667766 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.76
      DUF815  24 evklddLvgidkqkealventeqfle........glpa.nnvLLwGarGtGKSslvkallney 77 
                 ++++d++ g d+ k+al + +e+ l+        g++a + +LL+G  G+ K    +a+ +e+
  KHJ30463.1 472 SIRWDQIGGQDDVKKALRRAIETPLQypermkriGASArKGLLLYGPPGCSKTLSAQAMATEI 534
                 567777777777777777666544332222223344451458899999999998888888776 PP

>> DUF2791  P-loop Domain of unknown function (DUF2791)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0    0.0046         3      47      79 ..     247     279 ..     217     294 .. 0.75
   2 ?    2.6   0.0     0.075        48     242     291 ..     572     621 ..     571     626 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0046
     DUF2791  47 ggaafrfirGeYGsGKtFllqllreralergfv 79 
                  ++   ++ G  G+GKtFl++ + +    +++ 
  KHJ30463.1 247 QRSCAVLLHGAHGTGKTFLINKIINCGWTQNIF 279
                 555566789************999887777765 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.075
     DUF2791 242 lvvlDElvnlyklsnsdaReknyekllqilndvlqgkaeglgllltGTpe 291
                 ++++DE++ +    +++ R ++   l ++ln+++  +a + + +l+ T++
  KHJ30463.1 572 IIFFDEIESIGSQREKNGRVNSVHVLTTLLNEMDGIEALKDVTVLAATNQ 621
                 699**********9*******************99998888888888865 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       4.5   2.9e+03      61      86 ..     102     125 ..      74     145 .. 0.64
   2 ?    8.0   0.0    0.0052       3.3       9      33 ..     248     272 ..     241     283 .. 0.81
   3 ?   -2.2   0.0       7.6   4.8e+03      24      27 ..     325     328 ..     290     357 .. 0.56
   4 ?    0.2   0.0       1.3   8.3e+02       7      28 ..     507     528 ..     502     540 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 4.5
      AAA_19  61 rlaalgaeatTiHrlalldfddllte 86 
                 ++  l ++a TiH+  ++ ++d +t 
  KHJ30463.1 102 NV--LIEPAGTIHESENVVLKDVTTL 125
                 33..6677999*99877666665533 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0052
      AAA_19   9 kekvllvtaGpGtGKTrvlkhival 33 
                 ++  +l+ +  GtGKT ++++i+++
  KHJ30463.1 248 RSCAVLLHGAHGTGKTFLINKIINC 272
                 55567888999**********9975 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 7.6
      AAA_19  24 Trvl 27 
                 Tr++
  KHJ30463.1 325 TRII 328
                 3333 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 1.3
      AAA_19   7 alkekvllvtaGpGtGKTrvlk 28 
                 a+++k ll+ ++pG+ KT   +
  KHJ30463.1 507 ASARKGLLLYGPPGCSKTLSAQ 528
                 5678889***********7655 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0    0.0056       3.6       2      23 ..     252     273 ..     251     294 .. 0.89
   2 ?   -2.4   0.0       7.5   4.8e+03      26      63 ..     393     431 ..     385     446 .. 0.60
   3 ?    1.4   0.0      0.53   3.4e+02       4      32 ..     515     544 ..     513     579 .. 0.67

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0056
      AAA_28   2 ivitGgestGKTtlleaLaarg 23 
                 + + G+++tGKT l++++ + g
  KHJ30463.1 252 VLLHGAHGTGKTFLINKIINCG 273
                 7899***********9986665 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 7.5
      AAA_28  26 vvpEaareileeklakgedalpwv.edllafaervleeq 63 
                   pE++ e+le ++++++   ++    ll+ a ++ ee+
  KHJ30463.1 393 LPPEIYEEVLERLGDRTHAYTAEDlVSLLDAACEIAEER 431
                 558999999999998887644432233333333333333 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.53
      AAA_28   4 itGgestGKTtlleaLaar.gypvvpEaar 32 
                 + G++++ KT  ++a+a + +++ ++  + 
  KHJ30463.1 515 LYGPPGCSKTLSAQAMATEiDFNFFAVKGA 544
                 78**************97764444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (742 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       523  (0.0291706); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                        28  (0.00156172); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              28  [number of targets reported over threshold]
# CPU time: 0.74u 0.28s 00:00:01.02 Elapsed: 00:00:00.44
# Mc/sec: 5113.59
//
Query:       KHJ30464.1  [L=635]
Description: hypothetical protein EV44_g0023 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (635 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1333  (0.0743488); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.40
# Mc/sec: 4737.60
//
Query:       KHJ30465.1  [L=205]
Description: putative rab gtpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.8e-64  214.6   0.1    6.8e-64  214.4   0.1    1.0  1  Ras          Ras family
    7.9e-34  116.4   0.0    1.2e-33  115.9   0.0    1.2  1  Roc          Ras of Complex, Roc, domain of DAPkinase
    3.9e-13   49.2   0.1    4.9e-13   48.9   0.1    1.1  1  Arf          ADP-ribosylation factor family
    3.1e-05   23.6   0.0    5.6e-05   22.8   0.0    1.5  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    0.00017   21.0   0.0    0.00021   20.7   0.0    1.2  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
      0.001   19.1   0.0      0.008   16.3   0.0    2.0  2  MMR_HSR1     50S ribosome-binding GTPase
     0.0099   15.8   0.2        2.7    7.9   0.0    2.2  2  RsgA_GTPase  RsgA GTPase
  ------ inclusion threshold ------
      0.064   13.8   0.1       0.53   10.8   0.1    2.1  1  ABC_tran     ABC transporter
      0.071   13.4   0.0       0.73   10.1   0.0    2.1  2  AAA_22       AAA domain


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.4   0.1   3.4e-67   6.8e-64       1     161 [.      12     172 ..      12     173 .. 0.99

  Alignments for each domain:
  == domain 1  score: 214.4 bits;  conditional E-value: 3.4e-67
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 Kl+l+Gds+vGK++ llrf +d+F+ ++++Tig+df++++ie+dgk+vkl+iwDTAGqe+f++++++yyr+a+gillvyd+t+++sf+n+++w++++++
  KHJ30465.1  12 KLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQ 110
                 89************************************************************************************************* PP

                 HSTTTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHHH CS
         Ras 100 vaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 +a+e v+ +L+GnK+D ee+r++ste+g++la+elg++fle+SAk+n n+e+af +l+ +i+
  KHJ30465.1 111 HATEGVSKILIGNKCDWEERRVISTERGQQLADELGIQFLEVSAKSNINIEKAFLSLAADIK 172
                 *********************************************************99886 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.9   0.0   6.1e-37   1.2e-33       1     119 [.      12     126 ..      12     127 .. 0.92

  Alignments for each domain:
  == domain 1  score: 115.9 bits;  conditional E-value: 6.1e-37
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 K++l+GdsgvGK++ l rf ed+f+++  +tig+df+ +++ +++g       k+vkl+iWDtaGqerfr++++ y+r+a  ++lvyd   +rs++n++
  KHJ30465.1  12 KLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTI-ELDG-------KRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDvtdERSFNNIR 102
                 89**********************************98876.4444.......6899******************************97767889**** PP

                 HHHHHHHHHCSSS.-EEEEEE-TT CS
         Roc  97 eWlkelkkvagks.pvilvgnkiD 119
                 +W+++++++a++    il+gnk+D
  KHJ30465.1 103 TWFSNVEQHATEGvSKILIGNKCD 126
                 *********9987368*******9 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.9   0.1   2.5e-16   4.9e-13      15     132 ..      11     132 ..       3     175 .. 0.78

  Alignments for each domain:
  == domain 1  score: 48.9 bits;  conditional E-value: 2.5e-16
                 EEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSS..EEEEEEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHC CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvt.tvPTig..fnveelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkall 108
                 +++ll+G  + GK+  l ++++++++   + Tig  f+++++e   k +k+++wD  Gqe+ R +   Y++   +++ v D++d++ +++ ++ ++++ 
  KHJ30465.1  11 IKLLLIGDSGVGKSCCLLRFSEDSFTPsFITTIGidFKIRTIELdgKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNV- 108
                 799********************9987456666533788888876699***********************************************996. PP

                 TSGCCTTSEEEEEEE-TTSTTSS- CS
         Arf 109 eeeelkevallvlaNKqDlpeals 132
                 e++  + v  ++++NK D +e   
  KHJ30465.1 109 EQHATEGVSKILIGNKCDWEERRV 132
                 6667789999999*****987532 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   2.8e-08   5.6e-05      53     181 ..      44     160 ..      41     198 .. 0.72

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 2.8e-08
                 TSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTBSTHHHHH....HHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHH CS
    GTP_EFTU  53 giTiksaaisleketkkylinliDtPGHvdFskevirglrvlDgavlvvdaveGvepqtee....vlrlalkegvpiivfiNKmDrlkaelkeiveevk 147
                 gi  k+ +i+l+  +k+ ++++ Dt G + F   +++ +r + g +lv d+++    +  +    ++++  +egv  i++ NK+D  + ++  i +e  
  KHJ30465.1  44 GIDFKIRTIELD--GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRtwfsNVEQHATEGVSKILIGNKCDWEERRV--ISTERG 138
                 555667777777..**************************************996555444111155788899999*********874443..333333 PP

                 HHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTBTH CS
    GTP_EFTU 148 qklsrkeeklekygekgekevpvvfgSalkgegv 181
                 q+l           +++   ++++ +Sa+++ ++
  KHJ30465.1 139 QQL-----------ADE-LGIQFLEVSAKSNINI 160
                 333...........111.1234444444444444 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   1.1e-07   0.00021       1     122 [.      12     126 ..      12     165 .. 0.70

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.1e-07
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsi.iFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletl 98 
                 k+LL+G sg GK++       d +++  ++++g+  +++  e+   + ++l++wD  Gqe+f + +        +r    ++ V Dv+    e++++++
  KHJ30465.1  12 KLLLIGDSGVGKSCCLLRfSEDSFTPSFITTIGIDFKIRTIEL-DGKRVKLQIWDTAGQERFRTIT-----TAYYRGAMGILLVYDVT---DERSFNNI 101
                 89***********865440345667777777777777776666.36689************98876.....44455555667788888...45566666 PP

   Gtr1_RagA  99 keilealrqyspeakvfvli.hKmD 122
                 ++ ++++ q+  e   ++li +K+D
  KHJ30465.1 102 RTWFSNVEQHATEGVSKILIgNKCD 126
                 6667777777666666666644555 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0     4e-06     0.008       2      94 ..      13     102 ..      12     134 .. 0.69
   2 ?    1.2   0.0      0.18   3.7e+02      46      86 ..     137     179 ..     109     195 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 4e-06
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETT..EEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT.TTCSHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkg..keielvDtpGliegaseekglgkaflaleeadlillvvdas.eeklkpld 94 
                  +++G + vGKS  + + +++    s +    +d + ++++l+g   +++++Dt+G  e   + + ++ a+ +   a  illv d++ e+++++++
  KHJ30465.1  13 LLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGkrVKLQIWDTAG-QE---RFRTITTAYYR--GAMGILLVYDVTdERSFNNIR 102
                 579****************987766666666666677777766534679*******.44...23355555553..488999999987422344443 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.18
                 EEEEEEECGGCSS....HHHHHHHHHHHHHHHHCTSEEEEEEETT CS
    MMR_HSR1  46 keielvDtpGlie....gaseekglgkaflaleeadlillvvdas 86 
                 +  +l+D  G i+    +a+++ +++kafl+l  ad+   ++d+s
  KHJ30465.1 137 RGQQLADELG-IQflevSAKSNINIEKAFLSL-AADIKKRIIDSS 179
                 4457888889.433335677777999999974.468887778765 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0014       2.7     103     116 ..      14      27 ..      11      44 .. 0.86
   2 !    6.1   0.0    0.0049       9.8      43      93 ..     112     163 ..      84     177 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0014
                  EEECSTTSSHHHHH CS
  RsgA_GTPase 103 vlvGqSGvGKStLi 116
                  +l+G SGvGKS  +
   KHJ30465.1  14 LLIGDSGVGKSCCL 27 
                  69*********755 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0049
                  HHTT-EEEEEEE-GGG--HHH.HHHHHHHHHHHTTSEEEE--TTTHTTHHHH CS
  RsgA_GTPase  43 eekgiepvivlnKiDlleeee.eleelkeelealgyevllvsaktkegleel 93 
                   ++g++ +++ nK+D  e++  ++e+ ++   +lg+++l vsak++ ++e+ 
   KHJ30465.1 112 ATEGVSKILIGNKCDWEERRViSTERGQQLADELGIQFLEVSAKSNINIEKA 163
                  45678889999*****9999877888889999************99888864 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   0.00027      0.53      14     113 ..      13     187 ..      11     192 .. 0.59

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00027
                 EEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS...--S-TTSBHHHH.............................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxx.............................. RF
    ABC_tran  14 vaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqe...pqlfpeltvren.............................. 79 
                 + ++G++G GKS  l  +++ +  t   i+  g d+k +++e   k+++    +   ++ f++  + +                               
  KHJ30465.1  13 LLLIGDSGVGKSCCLLRFSEDSF-TPSFITTIGIDFKIRTIELDGKRVKLQIWDtagQERFRT--ITTAyyrgamgillvydvtdersfnnirtwfsnv 108
                 6799********98887776653.566666666666665555555555554444212222222..2222445677777777776666666667777777 PP

                 .......................................HHHTCHHHHHHHSTTGG.....................TTCBGESTTSGGS-HHH CS
                 .......................................xxxxxxxxxxxxxxxxx.....................xxxxxxxxxxxxxxxxx RF
    ABC_tran  80 .......................................esdeeiekalsklglke.....................lkdtvvksspssLSgGq 113
                                                        +                                     +k+++++ss+s+LSg q
  KHJ30465.1 109 eqhategvskilignkcdweerrvistergqqladelgiQ---------------FlevsaksniniekaflslaadIKKRIIDSSKSELSGSQ 187
                 7777777777777777777777774444444444444440...............344444444444444444444478999999999999876 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00037      0.73       8      27 ..      13      32 ..      12      58 .. 0.90
   2 ?    0.8   0.0      0.27   5.3e+02     106     131 ..      95     124 ..      87     130 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00037
      AAA_22  8 lvvtGesGtGKTtllrrlle 27
                l+++G sG+GK+ +l r+ e
  KHJ30465.1 13 LLLIGDSGVGKSCCLLRFSE 32
                689***********999876 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.27
      AAA_22 106 eealeeLrsllnl....srkgvqliLvGtp 131
                 e+ ++++r+++ +    ++ gv+ iL+G  
  KHJ30465.1  95 ERSFNNIRTWFSNveqhATEGVSKILIGNK 124
                 578999999988889999999999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 1503.72
//
Query:       KHJ30466.1  [L=656]
Description: putative atp synthase regulation protein nca2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-96  323.0   0.0    2.7e-96  322.1   0.0    1.4  1  NCA2      ATP synthase regulation protein NCA2


Domain annotation for each model (and alignments):
>> NCA2  ATP synthase regulation protein NCA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  322.1   0.0  1.5e-100   2.7e-96       3     289 .]     369     651 ..     367     651 .. 0.95

  Alignments for each domain:
  == domain 1  score: 322.1 bits;  conditional E-value: 1.5e-100
        NCA2   3 llspsslrllvnsreeilewiqeavetvkgfwknwvvePikellktirhdegseiaimskesLesdleSLerMvvdFaednse.....sklteaelekl 96 
                 ++  ++l + +++re i+ +i+++++t+++f  nw++eP+k++++tirhd +se+a+mskesL+ d++SLerMv+dFa dn++     s+l+e+++++l
  KHJ30466.1 369 ISFATILEFGLQKRELITLFIRDFGTTIRDFCINWLLEPVKKVISTIRHDPESELALMSKESLSGDRDSLERMVIDFAIDNHKtagldSSLSESQISNL 467
                 5556788888999********************************************************************98*****99********* PP

        NCA2  97 rekvregdltpvlkaYEkelrsPiknlvsGeLvraLLIQvqktKvDvevAlsgiDklLkSqeLvfgivaltPallilylllkllrallkkgrkaergkr 195
                 +  +reg+ltpvl+aYEkel++P+ +++ G+L+r+LLIQ+qk KvD+e+Al+giD+lLkSqeLvfg+v+ltP++li++++++++++++k+ r  ++g+ 
  KHJ30466.1 468 KLMIREGNLTPVLRAYEKELKNPLIGTIWGDLLRTLLIQIQKSKVDLEIALNGIDALLKSQELVFGFVGLTPGVLICFAVFRYISEVIKNMRGLKQGQ- 565
                 *****************************************************************************************777744555. PP

        NCA2 196 arrqllrslrnierlltessaeeeekeekeeenelsykdqGllllevhvLrklaekllpkelekefleDledLekvklgvekklkvveRirrvY 289
                 ++ q++r+lrni+r+lt  +++        ++n+lsykd+Glll e+hvLrk+a++l+p ++e+efleD++dL++++lg++++lk+++Rir+ Y
  KHJ30466.1 566 KAGQTMRTLRNIDRILTV-ATP-------VKSNQLSYKDYGLLLREAHVLRKYAHRLFPGNVEREFLEDITDLCEIRLGIRAQLKALKRIRWGY 651
                 5999************99.666.......46789**********************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (656 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4484.22
//
Query:       KHJ30467.1  [L=380]
Description: hypothetical protein EV44_g3952 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-07   32.2   0.1    2.5e-07   31.0   0.1    1.7  1  RNase_H   RNase H


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.1   1.4e-11   2.5e-07       4     142 ..      75     209 ..      72     210 .. 0.67

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 1.4e-11
                 EEEEEEEEEECTTTCEEEEE.EECTT..E.EEEEEEC....CCCHHHHHHHHHHHHHHH.TT.SC....SEEEEEES-HHHHHHHHCCCHHHHHTTSSS CS
     RNase_H   4 vvvYtDGsclgnpgeggaga.vlykegar.nisaple....eaqtnnraELsAvieaLk.alksd....ekvniytDSkYvvkgitqwvhrwkknawkt 91 
                 + +YtD+s+++ ++  g+g+ v+ +++ r +i ++l     + + +   EL+ +++ ++ a + +    +++ i++D + +++g+ +        + + 
  KHJ30467.1  75 TFIYTDASYMEDSK--GVGVsVVATDQ-RgTIMEKLAintgDGNLAYNVELEEITQGIEyA-SLQarpgHSFRIFSDNQAALHGLAK------LSDLPG 163
                 679*****995544..55554444453.447776666522234445578*********964.22234678999**********9998......233333 PP

                 ETTSSBHTTHHHHHHHHHC.HCSSEEEEEE-SCCSSSTHHHHHHHHHHHHHH CS
     RNase_H  92 tseqkpvknkdlaellkel.akkkkvqlkwvkgHaGvpkgNemaDrlAkeaa 142
                 +  q  + +   ++++k++  k+ k++++w++gH+ +  gN  aD lAk+a+
  KHJ30467.1 164 QGCQ--IRA---IAAAKKIkEKDAKISISWIPGHSQI-WGNVKADGLAKKAS 209
                 3333..333...2223333045789************.6**********996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2715.03
//
Query:       KHJ30468.1  [L=630]
Description: hypothetical protein EV44_g3279 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-05   24.5   1.1    2.9e-05   23.8   0.0    2.0  2  Retrotran_gag_2  gag-polypeptide of LTR copia-type
  ------ inclusion threshold ------
       0.06   13.5   0.1       0.15   12.2   0.1    1.7  1  Acetone_carb_G   Acetone carboxylase gamma subunit


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   3.2e-09   2.9e-05      26      89 ..       5      68 ..       1      79 [. 0.89
   2 ?   -3.6   0.3       0.9   8.1e+03     115     137 ..     141     163 ..     137     164 .. 0.70

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 3.2e-09
  Retrotran_gag_2 26 eektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsalgvkid 89
                     ++ t+ke Wd+Lke+y  +s++    l++++  l  +++ ++ ++i+kl e+  ++s ++   +
       KHJ30468.1  5 SSYTPKECWDNLKEFYCPNSTEDVHDLLEEFWGLTVEDDIDIDEFIQKLAEIRGKISLVDRSST 68
                     6789************************************************999998876555 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.9
  Retrotran_gag_2 115 seedltleevieklleeeerrke 137
                      +++ ++   ++++l ++++++k+
       KHJ30468.1 141 PNKAVKTMALQKRLSNRKNKKKK 163
                      66677777788888888877776 PP

>> Acetone_carb_G  Acetone carboxylase gamma subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   1.7e-05      0.15      65     112 ..       6      52 ..       2      54 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.7e-05
                     TTS--TTT-EEEEEE-TTT--EEEEEEE-TT------EEE-HHHHHHH CS
  Acetone_carb_G  65 llapdpewqrirEyycPecgtllevEaltpgyPvihdfepdidalkre 112
                     +++p++ w +++E+ycP++++ +  + l   + ++++  +did++ ++
      KHJ30468.1   6 SYTPKECWDNLKEFYCPNSTEDVH-DLLEEFWGLTVEDDIDIDEFIQK 52 
                     678999************998765.45666677888888899988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (630 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1652  (0.0921412); expected 358.6 (0.02)
Passed bias filter:                      731  (0.0407719); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.42
# Mc/sec: 4496.75
//
Query:       KHJ30469.1  [L=198]
Description: putative atp synthase subunit g [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.8e-31  107.9   0.0    9.5e-31  106.6   0.0    1.6  2  ATP-synt_G  Mitochondrial ATP synthase g subunit


Domain annotation for each model (and alignments):
>> ATP-synt_G  Mitochondrial ATP synthase g subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.35   6.2e+03      19      40 ..      32      53 ..      16      63 .. 0.53
   2 !  106.6   0.0   5.3e-35   9.5e-31       4     100 .]      87     191 ..      85     191 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.35
  ATP-synt_G 19 elskqvakkeklapPtvaefqs 40
                + +k+vak+  l+  t +  +s
  KHJ30469.1 32 QFAKEVAKSSPLSTATAKATDS 53
                3344444444444444444444 PP

  == domain 2  score: 106.6 bits;  conditional E-value: 5.3e-35
  ATP-synt_G   4 eslvpkavyyskvglelskqvakkeklapPtvaefqslykqllktalasps.........kpqellerlknlkkeeallagvvaaevlgfFsvGEiIGR 93 
                 ++ +p++vyy++vglelsk v++++++ pP ++ fqs++++ l++ l++ps         +pqe+l+r++nl++ e+++  v++ae+lgfF+vGEiIGR
  KHJ30469.1  87 QRNIPTTVYYARVGLELSKLVIHGRNMIPPPISAFQSYFQRTLEK-LRNPSsiltsaslkNPQEILQRARNLSSSELAAGMVLFAELLGFFTVGEIIGR 184
                 6789*****************************************.***************************************************** PP

  ATP-synt_G  94 rklvGYk 100
                 +kl+GYk
  KHJ30469.1 185 FKLIGYK 191
                 ******7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1433.79
//
Query:       KHJ30470.1  [L=244]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1934.86
//
Query:       KHJ30471.1  [L=382]
Description: hypothetical protein EV44_g3369 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.052   13.4   0.1      0.052   13.4   0.1    3.3  5  DUF1450   Protein of unknown function (DUF1450)
       0.24   12.0   6.1       0.28   11.7   4.9    1.7  1  Stc1      Stc1 domain
       0.38   10.9   4.3       0.95    9.6   0.4    2.4  3  Fer4_11   4Fe-4S dicluster domain
        2.7    8.0   6.4        3.4    7.6   0.5    2.3  2  C1_1      Phorbol esters/diacylglycerol binding domain (C1 do


Domain annotation for each model (and alignments):
>> DUF1450  Protein of unknown function (DUF1450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.1     5e+03      17      37 ..      32      51 ..      25      53 .. 0.75
   2 ?    0.3   0.1      0.14   6.2e+02      37      64 ..      95     122 ..      87     131 .. 0.72
   3 ?   13.4   0.1   1.2e-05     0.052      22      50 ..     131     160 ..     116     165 .. 0.79
   4 ?   -2.1   0.1      0.76   3.4e+03      37      49 ..     170     182 ..     168     184 .. 0.83
   5 ?   -3.4   0.0       1.9   8.7e+03      64      72 ..     200     208 ..     192     225 .. 0.58

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.1
     DUF1450 17 qevleklekdpdvdvieygCl 37
                + +l++l+ + +++++e+  l
  KHJ30471.1 32 N-LLNTLRPNNELSIVENSNL 51
                3.7889999999999998765 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.14
     DUF1450  37 lsnCglCakspfAlVnGeivaaetpeel 64 
                  ++C  C+++ +     + v a++  + 
  KHJ30471.1  95 FKQCSDCRQRNYTRRYPNAVPAQSVAQA 122
                 689******9998666666666666555 PP

  == domain 3  score: 13.4 bits;  conditional E-value: 1.2e-05
     DUF1450  22 klekdpdvdvieygClsnCglCaks.pfAl 50 
                 +++++p ++ + ++Cl +C++C+ks pf l
  KHJ30471.1 131 EIKSNPPIHTVPNNCLRTCTKCRKSnPFSL 160
                 6778899***************87426765 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 0.76
     DUF1450  37 lsnCglCakspfA 49 
                 l +C++C+ +++A
  KHJ30471.1 170 LYTCNNCRARLHA 182
                 668****998876 PP

  == domain 5  score: -3.4 bits;  conditional E-value: 1.9
     DUF1450  64 llekiykki 72 
                 +l++iy + 
  KHJ30471.1 200 ILDNIYDAG 208
                 555555443 PP

>> Stc1  Stc1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   4.9   6.3e-05      0.28       1      84 [.      97     177 ..      90     178 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 6.3e-05
                 E-SSS--EEETTTS-HHHHHTTTTEEEE-S-.......----TTTS-----EEE-SSS--EEESTTS-HHHHHS.SS---HHHH CS
        Stc1   1 kCkeckkkkplseFSkkqlkklekklaeekakvkkakskikCkectakqateleCsaCqktkpldeFsksqrrkpdaarCkdCv 84 
                 +C+ c++  ++ ++ +   ++  ++ ++  +   +++ k +   +t  ++   +C+ C+k++p + F++s+ ++    +C++C 
  KHJ30471.1  97 QCSDCRQRNYTRRYPNAVPAQSVAQASA--NVHLPVEIKSNPPIHTVPNNCLRTCTKCRKSNPFSLFANSNDSS-LLYTCNNCR 177
                 4888888888888877666555444433..3345666677788888888888********************99.9999****6 PP

>> Fer4_11  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.3     0.048   2.1e+02      54      86 ..      81     113 ..      59     123 .. 0.74
   2 ?    9.6   0.4   0.00021      0.95      42      87 ..     144     189 ..     137     195 .. 0.87
   3 ?   -3.8   0.0       3.1   1.4e+04      35      59 ..     336     360 ..     332     362 .. 0.70

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.048
     Fer4_11  54 cPykivrkneetgkvekCdmcldrveaGllpac 86 
                 c  + +++ +++ ++++C  c +r  + + p  
  KHJ30471.1  81 CHPSLFYDHTRNRNFKQCSDCRQRNYTRRYPNA 113
                 544556677777889999999999887777765 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00021
     Fer4_11  42 tkkeevrevveacPykivrkneetgkvekCdmcldrveaGllpacv 87 
                 ++  ++ +++++ P++ + + ++++ +  C+ c +r +a + p+ +
  KHJ30471.1 144 NCLRTCTKCRKSNPFSLFANSNDSSLLYTCNNCRARLHARRFPTAF 189
                 4556899******************************998888765 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 3.1
     Fer4_11  35 aVlldektkkeevrevveacPykiv 59 
                 +++++++ + +e +ev+ea P +++
  KHJ30471.1 336 LIIINNDLQTAERSEVIEAPPRRVP 360
                 5666777666789999999887766 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.8     0.022        98       9      36 ..      69     103 ..      63     107 .. 0.70
   2 ?    7.6   0.5   0.00076       3.4      13      41 ..     148     183 ..     142     188 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.022
                 SS--B-TTT-SB-.......-SSSS-EEEETTT-- CS
        C1_1   9 kqptfCkhCgefl.......wgkekqglkCswCkl 36 
                   +t+Ck  ++ +       ++ ++   +Cs+C++
  KHJ30471.1  69 ITSTYCKGYKKYChpslfydHTRNRNFKQCSDCRQ 103
                 56777776666666666884448888889999975 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00076
                 B-TTT-SB-.......-SSSS-EEEETTT--EE-CC CS
        C1_1  13 fCkhCgefl.......wgkekqglkCswCkllvHkk 41 
                 +C++C+++        +  ++  ++C++C+ + H +
  KHJ30471.1 148 TCTKCRKSNpfslfanSNDSSLLYTCNNCRARLHAR 183
                 69999998888999955599999***********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       688  (0.0383736); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.37
# Mc/sec: 3065.83
//
Query:       KHJ30472.1  [L=370]
Description: hypothetical protein EV44_g3721 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 3124.66
//
Query:       KHJ30473.1  [L=364]
Description: putative snare domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.5e-18   65.4  18.4    1.1e-17   64.4  18.4    1.5  1  Syntaxin       Syntaxin
    2.2e-10   40.3   1.2    2.2e-10   40.3   1.2    2.1  2  SNARE          SNARE domain
    3.2e-07   30.6   6.9    3.2e-07   30.6   6.9    2.3  2  Syntaxin_2     Syntaxin-like protein
     0.0037   16.0   3.2     0.0037   16.0   3.2    2.0  2  AAA_13         AAA domain
  ------ inclusion threshold ------
        1.5    8.3   8.3       0.31   10.5   2.4    2.0  2  Allexi_40kDa   Allexivirus 40kDa protein
        1.9    8.4   7.3       0.42   10.4   0.1    3.1  3  ETC_C1_NDUFA5  ETC complex I subunit conserved region
          4    7.9  11.3        8.2    6.9   3.0    3.6  2  DUF4094        Domain of unknown function (DUF4094)
        4.5    8.0  13.5        0.8   10.4   1.8    3.9  5  SlyX           SlyX
        8.9    6.4  10.6       0.76    9.8   4.3    2.3  2  Sec2p          GDP/GTP exchange factor Sec2p
        8.9    6.7  13.1        5.1    7.5   1.6    3.7  4  BLOC1_2        Biogenesis of lysosome-related organelles comp


Domain annotation for each model (and alignments):
>> Syntaxin  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.4  18.4   6.2e-21   1.1e-17       4     199 ..      65     253 ..      63     254 .. 0.94

  Alignments for each domain:
  == domain 1  score: 64.4 bits;  conditional E-value: 6.2e-21
    Syntaxin   4 ffkeveeikkeiekleeevkklkkqneesktstraksvk.lkkrmesdikeikkraesvkarLeaLdksnkenekksgegsavdRirksqtaaLrkklk 101
                 +++   +++++i+k++e +++l+  +++s+ +++ ++ k  +k+++ + +ei    ++v   +++++++ +++ +k+            q++ L++++ 
  KHJ30473.1  65 ILNSCADVNRQITKINETIASLQIMQKSSLDAVSDMQQKrARKQIDDLSSEIMSLFRKVTGDVKMIKQQPEASSSKN----------APQVERLSREIT 153
                 6778899*******************************99**************************99999887555..........457788889999 PP

    Syntaxin 102 evmteynelrekireeykerieRrlevtGkevseeeieelietgesevflqkllqeq.rga.realseieeRhkevlelekslkeLhqlFldmavLVEe 198
                 +v  +y+   ++ r+e   +i R+++++  +++++ei   +e+ +s++f+q llq   +g+ +++ +++++Rh+e++++e+++ eL  lF dm  LV +
  KHJ30473.1 154 KVRRNYEVSDSNYRKELEAQIARQVKIVRPDATDQEIRAAVEDPNSQIFSQALLQSDrQGQaQSTRNNVRQRHEEIQKIESQMIELAALFEDMNNLVIQ 252
                 9999***************************************************9989999***********************************88 PP

    Syntaxin 199 Q 199
                 Q
  KHJ30473.1 253 Q 253
                 7 PP

>> SNARE  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2       4.3   7.7e+03      12      28 ..     217     233 ..     215     236 .. 0.75
   2 !   40.3   1.2   1.2e-13   2.2e-10       3      53 .]     257     307 ..     255     312 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4.3
                 HHHHHHHHHHHHHHHHH CS
       SNARE  12 naqsnveraqkeLkkav 28 
                 ++++nv++ ++e++k +
  KHJ30473.1 217 STRNNVRQRHEEIQKIE 233
                 68889998888888865 PP

  == domain 2  score: 40.3 bits;  conditional E-value: 1.2e-13
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXXXXXXXXXXXXXXXXXXXX CS
       SNARE   3 vDrIdtnVenaqsnveraqkeLkkavkyqksnRklkciillilviillvvl 53 
                 + + + + e++++nv+++++eL  a  +++++Rk+k+ +l+i v+i++v++
  KHJ30473.1 257 IINVEMKGEEVVENVDKGTEELGVAIVSARNARKWKWWCLGISVLIFIVIV 307
                 6677778899***************************************97 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   6.9   1.8e-10   3.2e-07       2      94 ..      73     167 ..      72     174 .. 0.90
   2 ?    3.0   0.8     0.074   1.3e+02      25      63 ..     215     253 ..     196     278 .. 0.65

  Alignments for each domain:
  == domain 1  score: 30.6 bits;  conditional E-value: 1.8e-10
  Syntaxin_2   2 ssnlqkinsnvstleklvkq.Lgtkkd..teelreklhelieeinelikktnellkklsqldnsssdsqqklqkekLkkdfkealqeFqkiqrqya 94 
                 + +++kin+ + +l+ ++k+ L    d  +++ r+++++l +ei  l++k++ ++k ++q ++ ss+ ++  q e+L+++++++ ++++ +  +y+
  KHJ30473.1  73 NRQITKINETIASLQIMQKSsLDAVSDmqQKRARKQIDDLSSEIMSLFRKVTGDVKMIKQQPEASSS-KNAPQVERLSREITKVRRNYEVSDSNYR 167
                 679***************9988888886688889*****************************9975.7777**************9998877776 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.074
  Syntaxin_2  25 kkdteelreklhelieeinelikktnellkklsqldnss 63 
                 ++ t++  ++ he i++i     +  +l++++++l  ++
  KHJ30473.1 215 AQSTRNNVRQRHEEIQKIESQMIELAALFEDMNNLVIQQ 253
                 233333334446667777777777777888888776665 PP

>> AAA_13  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   3.2   2.1e-06    0.0037     361     458 ..      59     157 ..      41     161 .. 0.85
   2 ?    0.0   7.9      0.14   2.5e+02     281     392 ..     145     257 ..     142     280 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.1e-06
      AAA_13 361 kakiesikklvaeineliakhNekvanleeekeeakkklelhlveeleseldeykkkykklekaieklekelkeeeael.kkleeeikeLekqlrdekp 458
                 +a+ +si ++ a++n++i+k Ne++a+l+  +++  +++     +++++++d + +++ +l ++++   k +k++ ++   k + +++ L ++++++++
  KHJ30473.1  59 QANPNSILNSCADVNRQITKINETIASLQIMQKSSLDAVSDMQQKRARKQIDDLSSEIMSLFRKVTGDVKMIKQQPEASsSKNAPQVERLSREITKVRR 157
                 56668999*************************************************999999999988888887665505556689999999998876 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.14
      AAA_13 281 feekqerLekliekveskkselleklkavsdeasensafeedkeelkaeaealeeqLkglqraleaKrkepfk.svelesvkakiesikklvaeineli 378
                 +e+  +++ k   ++e + s++ ++l+a ++++ +  + +   +e++a+ e  ++q+ +     +++  +  + + ++ +  ++i++i++++ e+ +l 
  KHJ30473.1 145 VERLSREITKVRRNYEVSDSNYRKELEAQIARQVKIVRPDATDQEIRAAVEDPNSQIFSQALLQSDRQGQAQStRNNVRQRHEEIQKIESQMIELAALF 243
                 566677777888888999999999999999999999999999999999999999997654444444444443314446777777777777777777777 PP

      AAA_13 379 akhNekvanleeek 392
                 ++ N+ v + ee+ 
  KHJ30473.1 244 EDMNNLVIQQEEAI 257
                 77777776655544 PP

>> Allexi_40kDa  Allexivirus 40kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.4   0.00017      0.31      76     160 ..      65     146 ..      46     164 .. 0.72
   2 ?    1.2   0.4      0.12   2.1e+02     101     145 ..     210     254 ..     178     282 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00017
  Allexi_40kDa  76 qttlLselrdalrtltklldklksvekklelsaetasdskllkklesietsleelhakldelsssetsesegPsssptkassaea 160
                     ++ +++  +++++++++ +l+ ++k++ +  ++++++++ k+++ +  ++ +l +k+   +  ++  +++P++s++k++ +  
    KHJ30473.1  65 ILNSCADVNRQITKINETIASLQIMQKSSLDAVSDMQQKRARKQIDDLSSEIMSLFRKV---TGDVKMIKQQPEASSSKNAPQVE 146
                   33455667777888888888888888888888888888888888999998888888777...66777777777777777665544 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.12
  Allexi_40kDa 101 ekklelsaetasdskllkklesietsleelhakldelsssetses 145
                    ++ +++ ++++ ++  ++++ ie ++ el a ++++ + + +++
    KHJ30473.1 210 DRQGQAQSTRNNVRQRHEEIQKIESQMIELAALFEDMNNLVIQQE 254
                   333333333444444456666666666666666665555444433 PP

>> ETC_C1_NDUFA5  ETC complex I subunit conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1      0.95   1.7e+03      12      58 ..      86     132 ..      76     138 .. 0.60
   2 ?   10.4   0.1   0.00024      0.42      29      61 ..     163     195 ..     161     199 .. 0.91
   3 ?   -0.2   0.4       0.5   8.9e+02      43      60 ..     219     236 ..     214     239 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.95
  ETC_C1_NDUFA5  12 LialytktLkkLkkiPessvYRqsvEaltkhRlkiVee.eedvekiek 58 
                    L+ + ++ L++++ + ++ + R+++  l ++ +++  + + dv+ i++
     KHJ30473.1  86 LQIMQKSSLDAVSDMQQKRA-RKQIDDLSSEIMSLFRKvTGDVKMIKQ 132
                    55555666666666655555.666666666666666655556655555 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00024
  ETC_C1_NDUFA5  29 ssvYRqsvEaltkhRlkiVeeeedvekiekkig 61 
                    +s YR++ Ea +  + kiV  +++ ++i+ +++
     KHJ30473.1 163 DSNYRKELEAQIARQVKIVRPDATDQEIRAAVE 195
                    89*******************999999998775 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.5
  ETC_C1_NDUFA5  43 RlkiVeeeedvekiekki 60 
                    R ++ +  e+++kie+++
     KHJ30473.1 219 RNNVRQRHEEIQKIESQM 236
                    667777899999999986 PP

>> DUF4094  Domain of unknown function (DUF4094)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   1.3     0.053        94      51      80 ..      59      88 ..      33     177 .. 0.88
   2 ?    6.9   3.0    0.0046       8.2      35      78 ..     195     239 ..     174     288 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.053
     DUF4094 51 esrskdilgevskthkaiqtLdktissLem 80
                + +++ il+   + +  i++++ ti+sL++
  KHJ30473.1 59 QANPNSILNSCADVNRQITKINETIASLQI 88
                344778999999999999999999999985 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0046
     DUF4094  35 k.eelklvsedcdskdaesrskdilgevskthkaiqtLdktissL 78 
                 +  +++++s+   ++d +++ +   ++v ++h++iq+++ ++ +L
  KHJ30473.1 195 EdPNSQIFSQALLQSDRQGQAQSTRNNVRQRHEEIQKIESQMIEL 239
                 24667778888888999999888999**********997666554 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.9      0.38   6.9e+02      22      55 ..      72     105 ..      68     113 .. 0.69
   2 ?    1.8   1.0      0.22   3.9e+02      28      48 ..     104     128 ..      79     146 .. 0.62
   3 ?   -0.6   0.1       1.2   2.2e+03      32      47 ..     144     159 ..     139     178 .. 0.60
   4 ?   -2.2   0.0       3.6   6.5e+03       7      18 ..     169     180 ..     168     183 .. 0.68
   5 ?   10.4   1.8   0.00045       0.8       3      48 ..     227     272 ..     225     283 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.38
                 HHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXX CS
        SlyX  22 Lndvvaeqqqqidrlqrqlrllaerlkeleessg 55 
                  n+++++ +++i+ lq   +   + +++++++ +
  KHJ30473.1  72 VNRQITKINETIASLQIMQKSSLDAVSDMQQKRA 105
                 5777777788888877777777777777776655 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.22
                 HHHHHHHHHHHHHHHHHHT-....X CS
        SlyX  28 eqqqqidrlqrqlrllaerl....k 48 
                 + ++qid l  ++  l +++    k
  KHJ30473.1 104 RARKQIDDLSSEIMSLFRKVtgdvK 128
                 5578999999999999988855543 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHHHHT- CS
        SlyX  32 qidrlqrqlrllaerl 47 
                 q++rl r++ +++++ 
  KHJ30473.1 144 QVERLSREITKVRRNY 159
                 5566666666655554 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 3.6
                 HHHHHHHHHHHH CS
        SlyX   7 eLEiklafqedt 18 
                 eLE ++a q + 
  KHJ30473.1 169 ELEAQIARQVKI 180
                 678888777655 PP

  == domain 5  score: 10.4 bits;  conditional E-value: 0.00045
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-X CS
        SlyX   3 erleeLEiklafqedtieeLndvvaeqqqqidrlqrqlrllaerlk 48 
                 e ++++E+++  +  + e++n+ v++q++ i   + + ++++e++ 
  KHJ30473.1 227 EEIQKIESQMIELAALFEDMNNLVIQQEEAIINVEMKGEEVVENVD 272
                 789***************************9999888888877775 PP

>> Sec2p  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.2       0.9   1.6e+03      15      32 ..     101     121 ..      87     160 .. 0.57
   2 ?    9.8   4.3   0.00043      0.76       5      61 ..     218     273 ..     214     280 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.9
                 HHHHHHHHHHHHHH...HHHH CS
       Sec2p  15 ekkklekEledLta...sLFe 32 
                 ++k+  k ++dL++   sLF 
  KHJ30473.1 101 QQKRARKQIDDLSSeimSLFR 121
                 444555555555542223444 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00043
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT CS
       Sec2p   5 ekkkreeaekekkklekEledLtasLFeeANkmVaaarkekealekkneklkeqLke 61 
                 ++++ ++  +e +k+e+ + +L+ +LFe+ N++V++ ++   ++e k e++ e+++ 
  KHJ30473.1 218 TRNNVRQRHEEIQKIESQMIELA-ALFEDMNNLVIQQEEAIINVEMKGEEVVENVDK 273
                 56666777889999********5.7**********************9999988765 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.3     0.043        77      58      91 ..      67     101 ..      39     106 .. 0.61
   2 ?    2.8   0.7     0.083   1.5e+02      64      91 ..      73     101 ..      58     125 .. 0.61
   3 ?    1.0   0.4       0.3   5.3e+02      49      94 ..     126     173 ..     107     175 .. 0.58
   4 ?    7.5   1.6    0.0028       5.1      52      93 ..     214     255 ..     208     257 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.043
     BLOC1_2  58 eelqpylqqidqiekqvteLeeavs.eLDeyskeL 91 
                 ++ +   +qi +i++++++L+ + +  LD+ s  +
  KHJ30473.1  67 NSCADVNRQITKINETIASLQIMQKsSLDAVSDMQ 101
                 35566677888888888888776431566666655 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.083
     BLOC1_2  64 lqqidqiekqvteLeeavs.eLDeyskeL 91 
                  +qi +i++++++L+ + +  LD+ s  +
  KHJ30473.1  73 NRQITKINETIASLQIMQKsSLDAVSDMQ 101
                 45666666666666554321344444444 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.3
     BLOC1_2  49 kleklnekye.elqpylqqidqiekqvteLeeavseLDe.yskeLEak 94 
                 +++ ++++ e + +++  q++++ +++t+   + ++ D+ y keLEa+
  KHJ30473.1 126 DVKMIKQQPEaSSSKNAPQVERLSREITKVRRNYEVSDSnYRKELEAQ 173
                 444445554435556666666666666666666655553355666655 PP

  == domain 4  score: 7.5 bits;  conditional E-value: 0.0028
     BLOC1_2  52 klnekyeelqpylqqidqiekqvteLeeavseLDeyskeLEa 93 
                 + +++ +++++  ++i++ie q  eL ++ + +++ + ++E+
  KHJ30473.1 214 QAQSTRNNVRQRHEEIQKIESQMIELAALFEDMNNLVIQQEE 255
                 5667788999999************************99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (364 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2241  (0.124993); expected 358.6 (0.02)
Passed bias filter:                      797  (0.0444531); expected 358.6 (0.02)
Passed Vit filter:                        87  (0.00485247); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.68u 0.25s 00:00:00.93 Elapsed: 00:00:00.40
# Mc/sec: 2763.87
//
Query:       KHJ30474.1  [L=161]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1134  (0.0632495); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.35
# Mc/sec: 1367.01
//
Query:       KHJ30475.1  [L=445]
Description: putative duf1237 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   5.4e-180  598.7   0.0     6e-180  598.6   0.0    1.0  1  Glyco_hydro_125  Metal-independent alpha-mannosidase (GH125)


Domain annotation for each model (and alignments):
>> Glyco_hydro_125  Metal-independent alpha-mannosidase (GH125)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  598.6   0.0  3.4e-184    6e-180       1     416 []       7     430 ..       7     430 .. 0.98

  Alignments for each domain:
  == domain 1  score: 598.6 bits;  conditional E-value: 3.4e-184
                      SHHHHHHHHHHHHHHHHHTEEEETT........EEEE--BSS-SEEHHHHHHHHGGGGGGTTTS...GGGHHHHHHHHHHHHHHHHH-TT-SEE CS
  Glyco_hydro_125   1 dpdlarlfenafpntldttvkwkeka......eltfvitGDidamWlRDsanqlasYlpllked...eklaslirgvinlqaryilispYanaF 85 
                      dpdl+rlfen+fpn+ldt++kwk+ a      el+f+itGDi+amWlRDsanq++sY+++lk+d   ++lasl+rgvinlqaryi+  p +n+F
       KHJ30475.1   7 DPDLYRLFENSFPNSLDTAIKWKGVAannskeELAFLITGDINAMWLRDSANQMQSYRSFLKADsssDSLASLFRGVINLQARYINLAPLCNSF 100
                      89***********************999***********************************65669************************** PP

                      -..SS...SS---SS..--BS-TT.....EEE----HHHHHHHHHHHHHHHHHH---TT--HH.HHHHHHHHHHHHHHGG.......GHHH.H- CS
  Glyco_hydro_125  86 qppeesglkkteneaaqkdkvepeydeelvfeckyelDSlaaflqlsseyyeatgdleffeek.wvkaveaildvleeqqegtydedgkkvlks 178
                      qpp esgl++t+++  ++d+v p+ d ++vfeckyelDSlaaflq+s++yyeat+d +ff++  wv+av++i++++e+ ++gty+ dg +v+k 
       KHJ30475.1 101 QPPVESGLNPTKDH--DTDTVYPPPDADQVFECKYELDSLAAFLQISTNYYEATQDIQFFKDFqWVSAVQTIITTTESLMKGTYALDG-SVNKC 191
                      **********9996..469*****************************************7535**********************99.999** PP

                      ----B-SSSSGGGS-HHHHT-S----.SSS---SB-TTS-B-SSSEEHHHHHHHHHHHHHHHHHHHHTS--..HHHHHHHHHHHHHHHHHHHSE CS
  Glyco_hydro_125 179 aYtfqretnratetlsneglGnpvkentGlvrsaFRpSDDatifqflipaNmmlaveLeklaeileklaeke.lakearklakeiregiekhav 271
                      +Yt+qr+t++++etl n+g Gnpvk ++GlvrsaFRpSDD  i+q+lipaNmm+a++L+++++i++ l +++ la+ +++++++ir++i+k+a+
       KHJ30475.1 192 PYTWQRQTSSGSETLVNSGCGNPVKGDIGLVRSAFRPSDDVVIHQYLIPANMMFASYLDSASKIVAILGTEDdLADLMHQFSQSIRAAINKYAI 285
                      ******************************************************************9988778********************* PP

                      EEETTTEEEE-SEE-SSS-EE----SSSS-STTHHHHTSS-TT-HHHHHHHHHHTSTTSTTEEE-SS-EEE--TTS-TTEEEHHHHHHHHHT-- CS
  Glyco_hydro_125 272 vehkkfgkiyAyEvDGyGsallmDDanvPsLLslpllgyvkkddevYqnTrkfvlskanpYflkGkalsgiGgphvglgkaWpmalivqaltsd 365
                      v ++k+g++yAyEvDG+Gs + mDDan+PsLLs+p++ y++k+d +YqnTr++vlsk+npYf++G+++++iGgphvg+g+aWpma+iv+++tsd
       KHJ30475.1 286 VPDAKYGDVYAYEVDGFGSVNRMDDANIPSLLSAPIIRYINKNDVIYQNTRRYVLSKDNPYFMRGPVINAIGGPHVGPGMAWPMASIVNIFTSD 379
                      ********************************************************************************************** PP

                      -HHHHHHHHHHHHHTSTTSSS--SEEETTEEEEES-S-BHHHHHHHHHHHH CS
  Glyco_hydro_125 366 ddeeiaellklllkstaglglvhEsvnvdnekkftRswFawanslfgelil 416
                      +d+ei+++l+++++staglgl+hEs+n+ +e+++tR+wF+wan+lfge++l
       KHJ30475.1 380 NDTEITSALREIVSSTAGLGLIHESINSFDESRWTRQWFSWANGLFGECLL 430
                      ************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       363  (0.0202465); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3334.76
//
Query:       KHJ30476.1  [L=524]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (524 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       996  (0.0555525); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3869.58
//
Query:       KHJ30477.1  [L=112]
Description: hypothetical protein EV44_g0047 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-10   40.8   6.2    2.9e-10   39.9   6.2    1.5  1  PLDc_N    Phospholipase_D-nuclease N-terminal


Domain annotation for each model (and alignments):
>> PLDc_N  Phospholipase_D-nuclease N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9   6.2   1.6e-14   2.9e-10       1      40 [.      56      96 ..      56      98 .. 0.88

  Alignments for each domain:
  == domain 1  score: 39.9 bits;  conditional E-value: 1.6e-14
      PLDc_N  1 ilwiialidiird.rnpssklaWllvilflPvlGailYllf 40
                il ii++i ++++ r  s kl+W++v++++P++G+i+Y+lf
  KHJ30477.1 56 ILDIIVFIEVLKSdRLVSHKLLWCVVVFLFPIFGLIIYWLF 96
                799*********4255555*********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       608  (0.0339115); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 849.98
//
Query:       KHJ30478.1  [L=93]
Description: putative cytosolic copper metallochaperone [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.2e-13   48.4   0.1    1.3e-12   48.0   0.1    1.2  1  HMA       Heavy-metal-associated domain


Domain annotation for each model (and alignments):
>> HMA  Heavy-metal-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.0   0.1   7.2e-17   1.3e-12       7      62 .]      17      72 ..      13      72 .. 0.94

  Alignments for each domain:
  == domain 1  score: 48.0 bits;  conditional E-value: 7.2e-17
         HMA  7 mhCagCaakvekvLselpgVesvkvdlatktvtVegdaestklrkiieaiekagyk 62
                m C+gC++++++vL +l+g es +v+l+++ +tV + ++ +++++++++i+k+g+k
  KHJ30478.1 17 MPCGGCSGAITRVLDKLEGLESFDVSLENQLATVITRDDTVSYETVLKTIHKTGKK 72
                88**********************************7777799***********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       565  (0.0315132); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.24s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 729.26
//
Query:       KHJ30479.1  [L=430]
Description: putative homeobox domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.5e-20   70.6   0.5    1.5e-19   69.6   0.5    1.5  1  Homeobox_KN  Homeobox KN domain
    5.6e-08   32.5   1.6    4.8e-07   29.5   0.6    2.5  2  Homeodomain  Homeodomain
  ------ inclusion threshold ------
       0.57   10.1   4.1        3.3    7.7   0.2    3.1  3  PilP         Pilus assembly protein, PilP


Domain annotation for each model (and alignments):
>> Homeobox_KN  Homeobox KN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.6   0.5   2.5e-23   1.5e-19       1      40 []     357     396 ..     357     396 .. 1.00

  Alignments for each domain:
  == domain 1  score: 69.6 bits;  conditional E-value: 2.5e-23
  Homeobox_KN   1 WflahlhnPYPseedKeeLlkeTglsvkqitnWFINaRrR 40 
                  Wfl+hl++PYP+e++K++L++ Tgl+++qi+nW INaRrR
   KHJ30479.1 357 WFLNHLEHPYPTEDEKQQLMDSTGLQMNQISNWYINARRR 396
                  ***************************************9 PP

>> Homeodomain  Homeodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.077   4.6e+02       4      28 ..      23      47 ..      21      51 .. 0.90
   2 !   29.5   0.6   8.1e-11   4.8e-07       1      55 [.     340     397 ..     340     397 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.077
                 SSSS-HHHHHHHHHHHHHSSS-SHH CS
  Homeodomain  4 RttftkeqleeLeklFeenrypsae 28
                 Rt+ ++e  e+L + Fe  + +s+e
   KHJ30479.1 23 RTCASSEHHEQLPSIFELVPELSKE 47
                 9****************99999987 PP

  == domain 2  score: 29.5 bits;  conditional E-value: 8.1e-11
                  ST-SSSS-HHHHHHHHHHHH...HSSS-SHHHHHHHHHHHTS-HHHHHHHHHHHHHHH CS
  Homeodomain   1 rrkRttftkeqleeLeklFe...enrypsaeereeLAkklgLeerqVkvWFqNrRake 55 
                  r++R ++ k+ ++ L + F    e++yp+++e+++L +++gL+ +q+++W+ N R ++
   KHJ30479.1 340 RKRRGNLPKDTTDKLRTWFLnhlEHPYPTEDEKQQLMDSTGLQMNQISNWYINARRRQ 397
                  79999999***********95555*******************************885 PP

>> PilP  Pilus assembly protein, PilP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1     0.036   2.2e+02      20      51 ..       2      33 ..       1      49 [. 0.81
   2 ?   -0.5   0.0      0.18   1.1e+03      21      54 ..      60      93 ..      45     113 .. 0.74
   3 ?    7.7   0.2   0.00055       3.3      30      71 ..     163     204 ..     141     206 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.036
        PilP 20 lpeikpyeafaYsaaelrdPFkppkeeeeekk 51
                lp++ ++++f+Ys+++++ P+++   +e++++
  KHJ30479.1  2 LPSLPSFTKFEYSHNASKLPYRTCASSEHHEQ 33
                788999***************99888776654 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.18
        PilP 21 peikpyeafaYsaaelrdPFkppkeeeeekkeka 54
                +e++ ye+ +Y+  ++  P ++++ +++++++ +
  KHJ30479.1 60 SEPRCYEPRNYQVLNTCAPLSSSNCHQSKRRRLS 93
                57888999*******99**999998888765433 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.00055
        PilP  30 aYsaaelrdPFkppkeeeeekkekakksslqpdlnrrkepLE 71 
                 + +a+++ +PF++++++++ ++++  +++ +p+++ +k+pLE
  KHJ30479.1 163 SQTADNESSPFSRTETQSRPDSHRGLGNNSSPNFSLHKDPLE 204
                 34567788**********99999999***************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       523  (0.0291706); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 3180.52
//
Query:       KHJ30480.1  [L=344]
Description: putative peroxin 7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.8e-17   61.0  18.7    0.00019   22.1   0.2    6.4  6  WD40         WD domain, G-beta repeat
    6.5e-05   23.1   0.3       0.45   10.8   0.0    3.6  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0    0.0002       1.8      21      38 .]      74      90 ..      52      90 .. 0.82
   2 !   18.5   0.2     3e-07    0.0027       4      38 .]      98     134 ..      96     134 .. 0.79
   3 !   11.8   0.2     4e-05      0.36       8      38 .]     145     176 ..     138     176 .. 0.77
   4 ?    1.1   0.0     0.099   8.8e+02      18      36 ..     218     237 ..     200     239 .. 0.70
   5 !   22.1   0.2   2.1e-08   0.00019       3      38 .]     247     284 ..     245     284 .. 0.83
   6 !    6.8   0.5    0.0015        13       9      38 .]     296     328 ..     289     328 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0002
                TSSEEEEEETTSEEEEEE CS
        WD40 21 dgawlasGsdDgtvriWd 38
                ++++la+++ Dg+v+++d
  KHJ30480.1 74 ENQLLAACG-DGSVKLFD 90
                45569999*.******98 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 3e-07
                 EEEEESSSS.EEEEEEETTSSE.......EEEEETTSEEEEEE CS
        WD40   4 lrtltGHss.vtslafspdgaw.......lasGsdDgtvriWd 38 
                 ++ +  H+  v+++      +w       ++s+s+Dgt++iW+
  KHJ30480.1  98 IQNFHEHKReVYAV------SWnqitkdtFLSSSWDGTIKIWS 134
                 56677885569999......777777777889**********5 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 4e-05
                 ESSSSEEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40   8 tGHssvtslafspdgawlasG.sdDgtvriWd 38 
                  + s+ +s+ fsp+++ ++s+ s D ++ri+d
  KHJ30480.1 145 PTNSCTYSCTFSPHSPSILSSvSSDSHLRIFD 176
                 5553337899*******9987766******98 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.099
                 EETTSSE.EEEEETTSEEEE CS
        WD40  18 fspdgaw.lasGsdDgtvri 36 
                 ++++ +  +a+++ D+ +r 
  KHJ30480.1 218 WNKYRTTvIATAGVDQVIRT 237
                 33344443678899**9995 PP

  == domain 5  score: 22.1 bits;  conditional E-value: 2.1e-08
                 EEEEEESSSS.EEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   3 clrtltGHss.vtslafspdgaw.lasGsdDgtvriWd 38 
                 +l+tl GH+  v+ la+sp+ +  l+sGs+D tvr+W+
  KHJ30480.1 247 PLTTLHGHQYaVRKLAWSPHLSDiLISGSYDMTVRVWS 284
                 7899****446****88877777457***********5 PP

  == domain 6  score: 6.8 bits;  conditional E-value: 0.0015
                 SS.SSEEEEEEETTSSE........EEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgaw........lasGsdDgtvriWd 38 
                  H  +vt++      +w         as  +D  + +Wd
  KHJ30480.1 296 SHsEFVTGV------DWclfgaegwCASTAWDERILVWD 328
                 685559999......6655555555777789*******9 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0     5e-05      0.45      37      90 ..      60     114 ..      39     116 .. 0.78
   2 !    4.9   0.0    0.0035        32      36      81 ..     103     149 ..      98     156 .. 0.80
   3 ?   -1.2   0.0      0.28   2.5e+03      51      72 ..     161     182 ..     156     189 .. 0.80
   4 !    6.5   0.0    0.0011        10      36      89 ..     253     306 ..     226     308 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 5e-05
  ANAPC4_WD40  37 edsevrsLaWkp.dgklLavaysdgevrlldaesgkv.vhslsvksekavtclgWg 90 
                  ++ ++ + aW++  ++ L  a+ dg+v+l+d +  +  +++++ ++  +v  ++W+
   KHJ30480.1  60 TQDSIYDTAWSEmHENQLLAACGDGSVKLFDTSADNFpIQNFHEHKR-EVYAVSWN 114
                  56677788897526889999***********9887763777777766.69999997 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0035
  ANAPC4_WD40  36 kedsevrsLaWkp.dgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  ++++ev +++W++     +  +  dg++++ + +  + + +l+++s 
   KHJ30480.1 103 EHKREVYAVSWNQiTKDTFLSSSWDGTIKIWSPHRSESLTTLPTNSC 149
                  68899******97334456667779************9999999887 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.28
  ANAPC4_WD40  51 klLavaysdgevrlldaesgkv 72 
                  ++L  + sd+++r++d  +   
   KHJ30480.1 161 SILSSVSSDSHLRIFDLRTPSS 182
                  5788899999***999887655 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.0011
  ANAPC4_WD40  36 kedsevrsLaWkpd.gklLavaysdgevrlld.aesgkvvhslsvksekavtclgW 89 
                  +++  vr+LaW+p    +L  +  d +vr+ + a sg++  ++  +se  vt ++W
   KHJ30480.1 253 GHQYAVRKLAWSPHlSDILISGSYDMTVRVWSdAVSGEL-GNMASHSE-FVTGVDW 306
                  67889*******974789999999*****9751556655.44445555.4888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2597.97
//
Query:       KHJ30481.1  [L=862]
Description: putative fungal specific transcription protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.4e-07   30.1   0.2    7.3e-07   28.5   0.2    1.8  1  Fungal_trans  Fungal specific transcription factor domain
     0.0022   18.1  11.8     0.0039   17.3  11.8    1.4  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
       0.23   11.8   2.4       0.15   12.4   0.2    1.8  2  CBM_6         Carbohydrate binding module (family 6)


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.2   1.2e-10   7.3e-07      20     178 ..     305     460 ..     286     482 .. 0.78

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 1.2e-10
  Fungal_trans  20 flpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsLlllelyektss..dralhe 114
                   f p t   ns + +++ p+l+lail+ G++  + + ++s +++  ++       l+ +i+      +  +s++ +q+L + +l+    +  d  +++
    KHJ30481.1 305 FPPGT---NSASIRKSAPILFLAILSAGSSVNYIHLQQSLTDELMKA-------LSERIFV-----TKYKSIELIQALQISSLWYWPVEsfDEIKFY 386
                   44444...6667788999********************977777655.......7999888.....7777788888775544444444434789999 PP

  Fungal_trans 115 rhhgvavrlarslgLhrnpsyvgkks............lwklweeeaesrrRlwwaaFylDktialklGrpplldd 178
                    ++ +a  +a ++g +r+  + ++ +            ++ l++e  es rR+w++++ l +  +l+l+rp++++ 
    KHJ30481.1 387 QLRHTAAIMAIDIGIGRKNRSPKS-RvtsksgdhplcrNPCLDPESVES-RRTWLSCYLLCCSASLVLRRPNIIHW 460
                   99999999********99877663.36999***************6666.**********************8764 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3  11.8   6.6e-07    0.0039       1      39 [.      81     122 ..      81     124 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 6.6e-07
                 SS-HHHHHCT---ST....SSSS-HHHHHCTHHHCCCCTCCCE CS
     Zn_clus   1 haCdnCrkkKvKCda....kkPaCsnCkklnleCtfysesskr 39 
                 +aC+ Cr  Kv+C+     +  +C++C+k n  C   + +s++
  KHJ30481.1  81 RACEACRGLKVRCEPdpntQDDTCKRCAKANRICI-VTAPSRK 122
                 69***********9977655555************.5555554 PP

>> CBM_6  Carbohydrate binding module (family 6)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   2.5e-05      0.15       7      96 ..     176     266 ..     173     274 .. 0.87
   2 ?   -3.7   0.1       2.3   1.4e+04      62      85 ..     748     771 ..     732     780 .. 0.59

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.5e-05
                 EEES-EEEE--STTTSEEEE---TT-EEEEEEEEESSTEEEEEEEEEEESSSEEEEEEEESSTTSSEEEEEEE--.-SSTTEEEEEEEEEE CS
       CBM_6   7 kqsgvslekataagggkavgyinnGdwlaYkdvdfgsggaysvearvasgaaggsielrldsatgtlvgtvsvps.tggwqtyvtvsanvt 96 
                 ++s v++  ++ +++ k+   +n+Gdw  Y++ +f+ + +++++++ + + +    e +l+ ++ +   +++ ++ t+ + ++ + ++  t
  KHJ30481.1 176 NNSYVQSISENYSSSFKSCFDNNSGDWSCYTKAEFEPKTSTTISSKPSIDQNVKHAEMYLNQPKLPASTSAHSKVqTEPVRNWLDSTTRPT 266
                 5666778888888899999*****************************99999*********99999999999887999999977776655 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.3
                 EEEEESSTTSSEEEEEEE---SST CS
       CBM_6  62 ielrldsatgtlvgtvsvpstggw 85 
                 ++l    atg  vg+++ ++t+++
  KHJ30481.1 748 LQLLSEVATGNNVGQTTSNVTNNY 771
                 555555555555555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (862 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 5912.88
//
Query:       KHJ30482.1  [L=240]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.14   11.3   0.1       0.18   10.9   0.1    1.2  1  Peptidase_M36  Fungalysin metallopeptidase (M36)


Domain annotation for each model (and alignments):
>> Peptidase_M36  Fungalysin metallopeptidase (M36)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   9.9e-06      0.18      17      71 ..     124     178 ..     113     211 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 9.9e-06
                    -EEEE--S-TTTTTT-TTB-S.S-B..-SBSBSSSEEEEE-TT-S--T--....B CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_M36  17 relvtdpedkeaSplgWhdteakakaettttrGNNvlaqedsegsnllrpgssad 71 
                    ++  + p ++ +S++ W     + +++  +t  NN+ a +++++++ l+++++++
     KHJ30482.1 124 NKEAKLPITTLSSDNSWAAVARSGQKKARVTLNNNAQAVSSWKATQSLSSKHKPT 178
                    55566788999*********99999*****************9977765544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       663  (0.0369792); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1896.78
//
Query:       KHJ30483.1  [L=105]
Description: hypothetical protein EV44_g3868 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       269  (0.0150036); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 779.99
//
Query:       KHJ30484.1  [L=201]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       871  (0.0485805); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1568.15
//
Query:       KHJ30485.1  [L=305]
Description: putative guanyl-specific ribonuclease f1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       376  (0.0209716); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2257.95
//
Query:       KHJ30486.1  [L=377]
Description: putative mitotic apparatus protein p62 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0011   18.0  15.8     0.0068   15.3  15.2    2.1  1  XRCC4     DNA double-strand break repair and V(D)J recombinat


Domain annotation for each model (and alignments):
>> XRCC4  DNA double-strand break repair and V(D)J recombination protein XRCC4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3  15.2   3.8e-07    0.0068     158     221 ..     174     251 ..     170     331 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.8e-07
       XRCC4 158 rdwsdvterlekyvkakEeleadLYkrFilvLNEKKaKiRsLqkllkelqeseesteqkreka...............a 221
                 ++ ++++e l++++k k + e++L ++F l+LNEKK KiR+  + l +l+   +s+ ++r+k+               a
  KHJ30486.1 174 NEIKKLKETLDQMIKLKGDHENELMEKFALLLNEKKIKIREQYRSL-QLDSIGNSKPESRKKPvgpeqdksnlllseqA 251
                 5788999*********************************998888.67777777666666663434444444443331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1321  (0.0736795); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 2814.63
//
Query:       KHJ30487.1  [L=196]
Description: hypothetical protein EV44_g5310 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0018   18.2   0.0     0.0029   17.6   0.0    1.3  1  DUF2744   Protein of unknown function (DUF2744)
  ------ inclusion threshold ------
       0.16   11.7   0.6       0.21   11.4   0.6    1.2  1  Bac_DnaA  Bacterial dnaA  protein


Domain annotation for each model (and alignments):
>> DUF2744  Protein of unknown function (DUF2744)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   3.2e-07    0.0029      38      81 ..      16      60 ..       4      92 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 3.2e-07
     DUF2744 38 eylravskrlwecGvrp.vdPereikyqkPergersalnaagsWv 81
                e++ ++  + ++ G+r+ +dP   i +++P++ e+s++n++++  
  KHJ30487.1 16 EWIDMIEGHATDSGIRQyIDPMSSIAHNQPKKPEPSDYNPSATSL 60
                67889999*********9*********************998754 PP

>> Bac_DnaA  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.6   2.3e-05      0.21      92     153 ..      68     130 ..      56     178 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.3e-05
                 HHHHTT-SEEEEE-GGGG.TT-HHHHHHHHHHHHHHHTTT-EEEEEESS-TTT-SS--HHHHH CS
    Bac_DnaA  92 keklrkvDvLliDDiqfl.agkektqeelfhtfnalleegkqvvlssDrsPkeleeledrlrs 153
                 k  +r+ DvL   Diq   ++k+ + e   +++++l+++++++++ +    + l ++++rl+ 
  KHJ30487.1  68 KLMYREDDVLYRVDIQSYrQEKKLIGELRSKIVESLHQNHRKLIFGCMSCLEVLLQIKNRLEL 130
                 678********99**9772566777777789****************9999999999999964 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       678  (0.0378158); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1602.90
//
Query:       KHJ30488.1  [L=736]
Description: putative translation initiation factor eif-2b subunit epsilon [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.1e-18   65.0   0.8    1.5e-17   63.5   0.8    1.9  1  W2               eIF4-gamma/eIF5/eIF2-epsilon
    3.8e-10   39.1  17.3    2.5e-05   23.8   2.9    4.7  5  Hexapep          Bacterial transferase hexapeptide (six repea
    4.9e-06   26.3   0.0      1e-05   25.3   0.0    1.5  1  NTP_transferase  Nucleotidyl transferase
    6.4e-05   22.6  10.8      0.065   13.0   2.7    3.5  3  Hexapep_2        Hexapeptide repeat of succinyl-transferase
     0.0031   15.7   3.6     0.0071   14.5   3.6    1.5  1  DUF4954          Domain of unknown function (DUF4954)
     0.0036   16.3   1.2     0.0055   15.7   0.2    1.7  2  Fucokinase       L-fucokinase


Domain annotation for each model (and alignments):
>> W2  eIF4-gamma/eIF5/eIF2-epsilon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.8     5e-21   1.5e-17       2      78 ..     648     728 ..     647     729 .. 0.89

  Alignments for each domain:
  == domain 1  score: 63.5 bits;  conditional E-value: 5e-21
          W2   2 qvallgalerlcaekeellkllakilkaLYdeDileEeailkWgek....kskaekgkkkvrkkaepfvewLeeaeeeeee 78 
                 qv+++  l+r + +++   ++la++ ++LY  ++leE+a+lkW+++    + ++ ++++ vr+k+  f+ewL++ae+e+++
  KHJ30488.1 648 QVQMITCLQRDLTQRSIGATVLAALSQNLYSREVLEEDAFLKWWNHcetmGLEDTDQMTLVREKTGIFIEWLKQAESESSD 728
                 99**********99999*****************************6655222234499********************98 PP

>> Hexapep  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.1   0.00082       2.4      12      34 ..     346     368 ..     345     370 .. 0.88
   2 !   18.2   0.8   5.1e-07    0.0015       2      36 .]     360     393 ..     359     393 .. 0.86
   3 !   21.2   1.9   5.7e-08   0.00017       2      35 ..     377     409 ..     376     410 .. 0.64
   4 !   23.8   2.9   8.4e-09   2.5e-05       1      34 [.     399     431 ..     399     433 .. 0.95
   5 ?    0.3   0.2      0.23   6.7e+02       7      18 ..     434     445 ..     430     449 .. 0.56

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00082
                 TTEEEETTEEE-TTEEEETTEEE CS
     Hexapep  12 pfaviggnVkIGdnvkIgagvvi 34 
                 ++++++  +k+G+++++g+ +vi
  KHJ30488.1 346 NGVILARTCKVGKRTVLGRDTVI 368
                 78999999999999999999998 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 5.1e-07
                 EEEETTEEE-TTEEEETTEEE-TTEEEETTEEEES CS
     Hexapep   2 tvIGsnvlIgpfaviggnVkIGdnvkIgagvvigg 36 
                 tv+G +++I+  a + +n +IG+ + +g +v+i++
  KHJ30488.1 360 TVLGRDTVID-DASVIENSIIGRQCQVGKNVTIKN 393
                 899*******.555559999999999999999975 PP

  == domain 3  score: 21.2 bits;  conditional E-value: 5.7e-08
                 EEEETTEEE-TTEEEETTEEE-TTEEEETTEEEE CS
     Hexapep   2 tvIGsnvlIgpfaviggnVkIGdnvkIgagvvig 35 
                 ++IG  +++g++++i  n+ I d+vkIg g+vi+
  KHJ30488.1 377 SIIGRQCQVGKNVTI-KNAYIWDDVKIGDGSVIN 409
                 678888888886666.666666666666666665 PP

  == domain 4  score: 23.8 bits;  conditional E-value: 8.4e-09
                 TEEEETTEEE-TTEEEETTEEE-TTEEEETTEEE CS
     Hexapep   1 stvIGsnvlIgpfaviggnVkIGdnvkIgagvvi 34 
                 +++IG++++I   a+i++ ++IG+++ I +g+ i
  KHJ30488.1 399 DVKIGDGSVIN-RAIIANRCVIGKDCNIQPGALI 431
                 589********.********************98 PP

  == domain 5  score: 0.3 bits;  conditional E-value: 0.23
                 TEEE-TTEEEET CS
     Hexapep   7 nvlIgpfavigg 18 
                 +v Ig++ v+ +
  KHJ30488.1 434 GVRIGNGIVVKE 445
                 455555555544 PP

>> NTP_transferase  Nucleotidyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   3.3e-09     1e-05       2     136 ..      42     178 ..      41     188 .. 0.83

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 3.3e-09
                      EEEE--S--GGGTTCCTTSSGGGSEETTETETTHHHHHHHHHTT-SEEEEEEETTTHHHHHHHHTTSGGGT.......SEEEEEEESS--BGGH CS
  NTP_transferase   2 avILaGGsGtRLwPLtrtlakklvpvlgkerliqatlsrlansgieeiivvltqehsflveeqlkegskfg.......vevlialepegkgtAd 88 
                      avILa    tR+ P t +++  l+p +++  l+++tl+ la sg+ + i++     + ++e++++e   ++        +vl +++++ + + d
       KHJ30488.1  42 AVILADFFETRFVPFTLETPRCLLPLANT-ALLEYTLEFLAMSGVAD-IYIYCGAYASIIEDYIEESR-WNsdsptspFQVLKTVKTSARSIGD 132
                      788888889********************.*****************.77777788899999999875.7779988888888888888888888 PP

                      HHHHTHHHHTTSSE..EEEEETTEEEESTTHHHHHHHHHTHSSTT.SEE CS
  NTP_transferase  89 AvalaaelledeksdelvlvLggDhlikdayeeavkkaiekaakg.tvt 136
                      A++        +     +l++ gD + +  + +a+k +++++++   ++
       KHJ30488.1 133 AMRDLDSRNLIKG---DFLIVYGDLISNFPIDKALKTHRARNRADkNAI 178
                      8876544444334...37**********************999874333 PP

>> Hexapep_2  Hexapeptide repeat of succinyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.3     0.015        44       4      31 ..     356     390 ..     354     392 .. 0.50
   2 !   11.8   0.5   5.3e-05      0.16       3      26 ..     378     408 ..     376     409 .. 0.82
   3 !   13.0   2.7   2.2e-05     0.065       3      27 ..     418     444 ..     416     451 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.015
                 E-TT-EE-TT-EE...S....EEE-TT-EE-TT-E CS
   Hexapep_2   4 IGdnCliGanagi...G....vslGdncvvgaGvv 31 
                 +G+++++G + +i         ++G+ c vg +v+
  KHJ30488.1 356 VGKRTVLGRDTVIddaSvienSIIGRQCQVGKNVT 390
                 67777777777765222211124555555555555 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 5.3e-05
                 EE-TT-EE-TT-EE.......SEEE-TT-EE CS
   Hexapep_2   3 iIGdnCliGanagi.......GvslGdncvv 26 
                 iIG  C +G+n +i        v++Gd++v+
  KHJ30488.1 378 IIGRQCQVGKNVTIknayiwdDVKIGDGSVI 408
                 7888888888888766666999*******98 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 2.2e-05
                 EE-TT-EE-TT-EE..SEEE-TT-EE- CS
   Hexapep_2   3 iIGdnCliGanagi..GvslGdncvvg 27 
                  IG++C+i + a i  Gv +G++ vv 
  KHJ30488.1 418 VIGKDCNIQPGALIsfGVRIGNGIVVK 444
                 5*************9**********96 PP

>> DUF4954  Domain of unknown function (DUF4954)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   3.6   2.4e-06    0.0071     184     255 ..     353     426 ..     331     446 .. 0.60

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.4e-06
     DUF4954 184 naglikNvkigdyatiegasklengti..nSskeapveiGegViledfiissGskikdgavisrcfvGqavklk 255
                  +++ k + +g  ++i+ as +en  i  + +  + v+i +  i +d+ i  Gs i+ + +++rc++G+ ++++
  KHJ30488.1 353 TCKVGKRTVLGRDTVIDDASVIENSIIgrQCQVGKNVTIKNAYIWDDVKIGDGSVINRAIIANRCVIGKDCNIQ 426
                 34555667788888888888888876622233334444444445555555555555555555555555555554 PP

>> Fucokinase  L-fucokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.2   1.9e-06    0.0055     270     330 ..     362     425 ..     328     445 .. 0.75
   2 ?   -2.3   0.0      0.54   1.6e+03      84     161 ..     564     651 ..     541     677 .. 0.60

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.9e-06
  Fucokinase 270 k......kesavvinSvlessvsvgegsviehsslkgnvsigsnsivsglelesseeslelpddtil 330
                        ++ +v+ nS++  +++vg++  i++  + ++v+ig +s++    +++    + + +d+ +
  KHJ30488.1 362 LgrdtviDDASVIENSIIGRQCQVGKNVTIKNAYIWDDVKIGDGSVINRAIIANR---CVIGKDCNI 425
                 03444458899999*******************************9966666643...345555444 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.54
  Fucokinase  84 ldigtnHGVfvlddq.............sseeeeleirsvkkflhKpseeelqasgavlkdekvlldsGvvffdhktaekLlklykeskpL 161
                 ld+ ++HG f + +              ++  + + +  vk++++    e+l+a   +   + v+  sG+  f +++   L +l++++ ++
  KHJ30488.1 564 LDTLKEHGDFDSAKLelmglrlstdatdQQVCRAIAVAFVKRIVQLMENENLEA---IKAVKLVFDTSGAEKFFKEVGIGLDHLIDSQVQM 651
                 555555555544444444444444444555566677777777777777777773...4444555555555555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (736 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       485  (0.0270511); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 5123.95
//
Query:       KHJ30489.1  [L=496]
Description: putative sec14 cytosolic factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.9e-36  124.2   0.0    6.8e-36  123.4   0.0    1.4  1  CRAL_TRIO     CRAL/TRIO domain
    5.3e-31  107.0   0.6    1.3e-30  105.8   0.2    1.8  2  Prefoldin     Prefoldin subunit
    1.7e-07   31.3   0.6    1.2e-06   28.6   0.2    2.5  2  CRAL_TRIO_N   CRAL/TRIO, N-terminal domain
  ------ inclusion threshold ------
       0.14   12.7   1.3        3.4    8.3   0.1    2.6  2  Syntaxin-6_N  Syntaxin 6, N-terminal
       0.39   10.3   3.9        2.1    7.9   0.3    2.2  2  DUF4795       Domain of unknown function (DUF4795)


Domain annotation for each model (and alignments):
>> CRAL_TRIO  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.4   0.0   1.9e-39   6.8e-36       2     158 ..     293     457 ..     292     458 .. 0.93

  Alignments for each domain:
  == domain 1  score: 123.4 bits;  conditional E-value: 1.9e-39
   CRAL_TRIO   2 eileggkvgihgrDkegrpvlylrlgrfdpk...kls.leelvralvlvlerllkelee......dgqvegvtvviDlkglslskmlwkp.isllkkil 89 
                 ++ ++++ ++h++Dk+grp+++ +lg++d +   k++  e++++ l + +e++ +   +      +  +e+++ ++Dlkg++lsk++  + + ++++ +
  KHJ30489.1 293 QVFQYYPKYYHKTDKDGRPLYIEQLGKIDLTamyKITtPERMLNNLAVEYEKMSDPRLPacsrksGVLQETCCTIMDLKGVGLSKIS--SvYAYVRQAS 389
                 577999****************************88889*************999444456668899*******************9..55******** PP

   CRAL_TRIO  90 kilqdnyperlgkilivnaPklfkfafklvkpfldektreKikfvspsnteatlekyidpeqlpkelGG 158
                 +i q++yperlg+++i+naP+ f+ af++vk++ld++t eKi+++++   +++l  ++++e+lpk +GG
  KHJ30489.1 390 TISQNYYPERLGRLYIINAPWGFSGAFSIVKGWLDPVTVEKIHILGSG-YQKELLAQVPAENLPKIFGG 457
                 *********************************************665.569***************** PP

>> Prefoldin  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.26   9.1e+02      88     111 ..      30      53 ..      26      61 .. 0.47
   2 !  105.8   0.2   3.5e-34   1.3e-30       1     120 []      52     174 ..      52     174 .. 0.98

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.26
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  88 elekqlekleeeleklkdqittle 111
                 ++ +++ ++e+ l+  ++ i +++
  KHJ30489.1  30 DYVSSRADVEQTLKNFQEMIAKYQ 53 
                 444444444444444444444444 PP

  == domain 2  score: 105.8 bits;  conditional E-value: 3.5e-34
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT....-TT-EEEEEEETTEEEEEE--STTEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin   1 lkeeleslqaelaqlkeaieelektletlktlkk...edegkevlvplgaglyvkaevkdtdkvlvdlGagyyveksleeAiellkkkleelekqlekl 96 
                 ++ ++++ q++ a lk+++++++ktlet++ lk+     +++e++++l+++ly+ka+v+ t++v+++lGa++++ ++++eA+ell  kl+ +e +le++
  KHJ30489.1  52 YQYMEANQQRRAAGLKDKMPDIRKTLETVRFLKTrksDAKPIEATFELNDTLYAKANVPYTEDVYLWLGANVMLSYPINEAEELLISKLSAAELSLENC 150
                 7889999999999**********************9999************************************************************ PP

                 HHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  97 eeeleklkdqittleanlaqlyqk 120
                 ee+l++l++qitt+e++ a++y++
  KHJ30489.1 151 EEDLDFLREQITTMEVATARVYNW 174
                 **********************98 PP

>> CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.45   1.6e+03      35      45 ..      80      90 ..      66      98 .. 0.84
   2 !   28.6   0.2   3.4e-10   1.2e-06      29      53 ..     244     268 ..     223     269 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.45
  CRAL_TRIO_N 35 LRfLRArkwdv 45
                 +RfL+ rk d 
   KHJ30489.1 80 VRFLKTRKSDA 90
                 79***999765 PP

  == domain 2  score: 28.6 bits;  conditional E-value: 3.4e-10
  CRAL_TRIO_N  29 hddaclLRfLRArkwdvekAikrLe 53 
                  +d  +lLRfLRArk+dv+ A k+++
   KHJ30489.1 244 IDTLTLLRFLRARKFDVALAEKMFI 268
                  44449******************97 PP

>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.1   0.00096       3.4       3      53 ..      31      80 ..      30      83 .. 0.86
   2 ?    2.7   0.1     0.053   1.9e+02      49      83 ..     146     180 ..     124     204 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00096
  Syntaxin-6_N  3 FfevkeeVqkslnkaeslyrrwerlledtssstseeldetrteLrkalrsi 53
                  +++ +++V+++l++ ++++++++ +  +++ ++   l++ + ++rk+l+++
    KHJ30489.1 31 YVSSRADVEQTLKNFQEMIAKYQYMEANQQ-RRAAGLKDKMPDIRKTLETV 80
                  77889*****************97666555.56999*********999987 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.053
  Syntaxin-6_N  49 alrsiewdledLeetvriveknpsk.fkidekelsr 83 
                   +l++ e+dl+ L+e + ++e   ++ ++ d  +++r
    KHJ30489.1 146 SLENCEEDLDFLREQITTMEVATARvYNWD-VTMKR 180
                   68999***********99988777734333.33333 PP

>> DUF4795  Domain of unknown function (DUF4795)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.3   0.00057       2.1     135     169 ..      35      70 ..      26      94 .. 0.87
   2 ?    3.4   0.3     0.014        50      27      98 ..     137     208 ..     127     293 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00057
     DUF4795 135 keqleerlkelqkelqeamekedk.edeaaglrkkL 169
                 +  +e++lk+ q+++ ++  +e + + +aagl+ k+
  KHJ30489.1  35 RADVEQTLKNFQEMIAKYQYMEANqQRRAAGLKDKM 70 
                 67899**********999888877788999999987 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.014
     DUF4795  27 eekvkelekrledkekklealkkqieelekvkadkeeveeelaekadkeaLatkvsrdqfDeakkeLekmle 98 
                  +k +  e +le++e++l+ l++qi   e + a  ++ +  ++ k    ++ +  + ++fD++ + ++  ++
  KHJ30489.1 137 ISKLSAAELSLENCEEDLDFLREQITTMEVATARVYNWDVTMKRKEQNAQMTSEENSSKFDAKYDNFDYPTT 208
                 556667777899*********************999999999999999999999999999999887765555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1038  (0.057895); expected 358.6 (0.02)
Passed bias filter:                      622  (0.0346924); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 3625.53
//
Query:       KHJ30490.1  [L=484]
Description: putative alanine aminotransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.6e-25   89.4   0.0    3.5e-25   89.0   0.0    1.1  1  Aminotran_1_2  Aminotransferase class I and II


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.0   0.0   1.9e-29   3.5e-25      27     335 ..     104     445 ..      88     466 .. 0.83

  Alignments for each domain:
  == domain 1  score: 89.0 bits;  conditional E-value: 1.9e-29
                    HHHHHHHHTSTTST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEEESS-THHHHHHHHTTSEEEEEEB CS
  Aminotran_1_2  27 ekegalaggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgdeilvpdptyasyknilrlsggevvrypl 122
                     +  + a g+l  y+ + g p++++ +akfl ++ +++ ++   + ++sGa+++ + l  +++  p + +lvp p ++  + ++   g+++v+y +
     KHJ30490.1 104 KI-LLKAIGSLGAYTATNGIPQVRKSIAKFLEKRDGHPAEPA-DIYLSSGASSAMVNLLNVICDKPATGVLVPFPQFPLQTAMVSRLGSKLVPYYI 197
                    33.48899**********************************.*********999999999999******************************** PP

                    EETTTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTTTCBSSSS..HTHHH.......HGGSTT CS
  Aminotran_1_2 123 yseedfhldlealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsl..davat.......ranvee 209
                    + + + + d+ea++ a+k a++    ++ +++ +p N t + ++ e++e+++dla   +l+++ DeaY+   f+++  ++ ++       ++n  +
     KHJ30490.1 198 SGPRNSETDFEAIKSAYKIAKKTGTDVRAMVIINPGNLTSKCFSVEDIEAIIDLAATERLVIITDEAYQNNIFEDKfySFKRVlrdlqnlYPN--K 291
                    ************************9*************************************************9877777769775533333..3 PP

                    STT..EEEEEESSSTT.SSGGG-EEE..EEE.EHHHHHHHHHHHHHHTS.SHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHHH CS
  Aminotran_1_2 210 epn..llivgslsKaf.GlaGeRvGy..ilg.naavvsqlrklsrpfls.ssllqaavaaalsdallkqs.......eleemrqrlqkrrkelrde 291
                    ++n  l+   s+s  + G  G R G+  ++g ++av  q+ kl ++ ++ +s++q ++  +++ +++          e       l++++  l++ 
     KHJ30490.1 292 YDNveLASIHSVSMGMvGEGGQRGGFfeLVGfDPAVQFQIYKLLSFTNYcPSIAQCLIELMVNPPQEDSAsyelyekEYCSIFVDLKEKSFALYEV 387
                    3334477777777666556667****44466788***************78888888888888777666588885555555556789999999999 PP

                    HHHS.TEEEECCSCSSEEEEEETHH.CHHHHHHH............HHHTCTEEEEEG CS
  Aminotran_1_2 292 Lael.glkvlasqsgmflltdlsae.takelskk............Lleevgvyvtpg 335
                    L++  g+++ ++q+ m+l+  ++   +  e++kk            L e  g+ v+p 
     KHJ30490.1 388 LKQMeGVECSEPQGSMYLFPYFKLPtKLVEAAKKegrspcefyassLFEATGICVVPS 445
                    9999**************9998877433344444666777777778888888888884 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       425  (0.0237046); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 3320.62
//
Query:       KHJ30491.1  [L=308]
Description: hypothetical protein EV44_g1662 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0036   17.9   7.5        2.2    9.0   4.9    3.0  4  YabA            Initiation control protein YabA
  ------ inclusion threshold ------
       0.25   11.6   6.8      0.084   13.2   2.6    2.2  2  DUF4709         Domain of unknown function (DUF4709)
          2    9.4  13.4       0.97   10.4   2.6    2.9  2  PRKG1_interact  cGMP-dependent protein kinase interacting dom
        4.6    7.7  16.9        0.1   13.0   6.5    2.5  2  CENP-H          Centromere protein H (CENP-H)
          5    7.5   8.3        3.1    8.2   2.5    2.3  2  Syntaxin_2      Syntaxin-like protein


Domain annotation for each model (and alignments):
>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.3   4.5e+03      24      42 ..      78      96 ..      72      98 .. 0.73
   2 !    9.0   4.9    0.0006       2.2       6      71 ..      99     165 ..      93     176 .. 0.78
   3 ?    2.5   0.0     0.062   2.2e+02      24      52 ..     189     217 ..     159     228 .. 0.62
   4 !    8.0   0.0    0.0012       4.4       7      77 ..     207     308 .]     200     308 .] 0.71

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.3
                HHHHHHHHHHHHHHHHHHH CS
        YabA 24 leelkeelaelleenaeLe 42
                + +l eel+++l+ n++L+
  KHJ30491.1 78 IMSLVEELSKVLQTNQNLT 96
                5567778888888888875 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0006
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXX CS
        YabA   6 lfdkleeleeqleelleeleelkeelaelleen.aeLeleneklrerleeeekkekekkkelsegke 71 
                 +++++ ++ e+ ++++ + +el +e+ae ++++ +++e en+ lr+ lee+e +++++ k   ++ +
  KHJ30491.1  99 VVERIGKVREKAMHMNLKSDELLTEVAENINKDsSNIEKENSALRRALEETEFEKEQNWKLAIHAAN 165
                 678999999999999999999999998877665278************8777777776655555554 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.062
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA  24 leelkeelaelleenaeLeleneklrerl 52 
                  ++ +++la+  een +L+++ + +++  
  KHJ30491.1 189 HKNYRKQLAAEREENLRLRCQIDDMKSAA 217
                 35567777888888888888877777655 PP

  == domain 4  score: 8.0 bits;  conditional E-value: 0.0012
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH................................XXXXXXXXXXXXXXXXXXXXX CS
        YabA   7 fdkleeleeqleelleeleelkeelaelleenaeLeleneklrerl................................eeeekkekekkkelsegkenL 73 
                   +++++++  ++ +++l+++++ +++  +e +eL+++n  lr++                                    +++ek+++  ++ g ++L
  KHJ30491.1 207 RCQIDDMKSAAGKANQSLRDMRRCITDN-NEWHELKVQNCALRQEKrywkrlalplvpdddsewsddddlidpeeknrLAYNETEKKSTDMSDCGSSEL 304
                 568999999************9988875.67899*********98877888888888887777777777777765543222233333333344455556 PP

                 XXXX CS
        YabA  74 arlY 77 
                  r+Y
  KHJ30491.1 305 VRIY 308
                 6555 PP

>> DUF4709  Domain of unknown function (DUF4709)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.6     0.073   2.6e+02      20      95 ..      72     143 ..      69     145 .. 0.43
   2 ?   13.2   2.6   2.3e-05     0.084      32     103 ..     121     197 ..     112     202 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.073
     DUF4709  20 QTdvsEilel.keltevtqkLvkevkslkrdfeflkqllqakyeeklkeealelytrlndklkeleklykekvevvR 95 
                 QTd + i++l  el++v+q+  + ++ + + ++  ++        +++ ++ el t++ +++++  ++ +++ +++R
  KHJ30491.1  72 QTDLTFIMSLvEELSKVLQTNQNLTAGVVERIGKVRE---KA--MHMNLKSDELLTEVAENINKDSSNIEKENSALR 143
                 5555555543133444444333333333333222211...11..123345566666666666655555555555555 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 2.3e-05
     DUF4709  32 ltevtqkLvkevkslkrdfeflkqllq.akyee....klkeealelytrlndklkeleklykekvevvRksfkqQLa 103
                 ltev++++ k+ ++++++ + l+++l+ +++e+    kl  +a ++ t l+++l++ ++l++    +  k +++QLa
  KHJ30491.1 121 LTEVAENINKDSSNIEKENSALRRALEeTEFEKeqnwKLAIHAANILTDLTERLHRFKELHEIDTLIWHKNYRKQLA 197
                 8999************9999999888538999866667999**********************************97 PP

>> PRKG1_interact  cGMP-dependent protein kinase interacting domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   3.2     0.032   1.1e+02      24      95 ..     107     144 ..      78     182 .. 0.50
   2 ?   10.4   2.6   0.00027      0.97       1      48 [.     191     234 ..     191     298 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.032
  PRKG1_interact  24 ekelselkseleklkqqrqesvskrssllelekrerrslerkiseleeelkeleeLraenqrLkdEngALiR 95 
                     +++  +++ + ++l +                                  ++ e++ ++++ + +En AL R
      KHJ30491.1 107 REKAMHMNLKSDELLT----------------------------------EVAENINKDSSNIEKENSALRR 144
                     3333333333333332..................................3333333344444444444333 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00027
  PRKG1_interact   1 dYkkLYeeekeenerLkreLeelekelselkseleklkqqrqesvskr 48 
                     +Y+k   +e+een rL+ ++++++    +++++l  +++     ++++
      KHJ30491.1 191 NYRKQLAAEREENLRLRCQIDDMKSAAGKANQSLRDMRRC----ITDN 234
                     79***************************99999988744....2222 PP

>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   6.5   2.9e-05       0.1       8      83 ..      82     158 ..      75     170 .. 0.75
   2 ?    0.7   2.2      0.19   6.9e+02      25      83 ..     192     252 ..     166     277 .. 0.56

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.9e-05
      CENP-H   8 rdelssellklsqelrelqeeltevekenlrlkrknrelaaellelakekesekeklkeelekleaelk.ksrqrwr 83 
                  +els+ l+  ++ ++ + e++ +v++++++++ k+ el++e++e  ++++s  ek++++l ++ +e++ +++q+w+
  KHJ30491.1  82 VEELSKVLQTNQNLTAGVVERIGKVREKAMHMNLKSDELLTEVAENINKDSSNIEKENSALRRALEETEfEKEQNWK 158
                 5789999999999******************************6544444444455556666655555514455565 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.19
      CENP-H  25 lqeeltevekenlrlkrknrelaael.l.elakekesekeklkeelekleaelkksrqrwr 83 
                  +++l+  ++enlrl+ +   + +      ++  ++++  ++++e ++l+ +  + rq+ r
  KHJ30491.1 192 YRKQLAAEREENLRLRCQIDDMKSAAgKaNQSLRDMRRCITDNNEWHELKVQNCALRQEKR 252
                 5566666666666666555554444432133333333333344444444444444444333 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   2.5   0.00085       3.1      15      88 ..      82     179 ..      73     183 .. 0.67
   2 ?    2.5   0.4     0.054   1.9e+02      16      60 ..     190     238 ..     179     252 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00085
  Syntaxin_2  15 leklvkqLgtkkd........teelreklhelieeinelikktnellkklsqldnsssds................qqklqkekLkkdfkealqeFqk 88 
                  e+l k L+t+++          ++rek+  +  +  el++++ e+++k s++++++++                 +  + ++ + +d++e l++F++
  KHJ30491.1  82 VEELSKVLQTNQNltagvverIGKVREKAMHMNLKSDELLTEVAENINKDSSNIEKENSAlrraleetefekeqnwKLAIHAANILTDLTERLHRFKE 179
                 56777888888877555555566667777777777777777777777776666666665587777777777777666666777777777777777776 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.054
  Syntaxin_2  16 eklvkqLgtkk.dteelrekl...helieeinelikktnellkklsqld 60 
                 ++++kqL   + ++ +lr ++   ++   ++n+ ++++ + + + +++ 
  KHJ30491.1 190 KNYRKQLAAEReENLRLRCQIddmKSAAGKANQSLRDMRRCITDNNEWH 238
                 7899999999845888887772224444456666666666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1468  (0.0818785); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 2262.78
//
Query:       KHJ30492.1  [L=184]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.025   14.3   8.1        1.2    8.9   0.4    3.2  3  A2L_zn_ribbon    A2L zinc ribbon domain
        1.5    8.7   7.2        8.2    6.3   0.2    3.2  3  HscB_4_cys       Co-chaperone HscB tetracysteine metal bindin


Domain annotation for each model (and alignments):
>> A2L_zn_ribbon  A2L zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.4   0.00013       1.2      15      28 ..      67      80 ..      66      85 .. 0.92
   2 ?    0.1   0.6     0.079   7.1e+02      24      29 ..      94      99 ..      93     101 .. 0.60
   3 ?    8.2   0.0   0.00023       2.1       5      20 ..     112     126 ..     108     130 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00013
  A2L_zn_ribbon 15 lnseqgylvCieCg 28
                   +n++q +++C+ C+
     KHJ30492.1 67 FNKKQQIEFCKRCN 80
                   79***********7 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.079
  A2L_zn_ribbon 24 CieCga 29
                   C +Cg+
     KHJ30492.1 94 CGNCGS 99
                   666666 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.00023
  A2L_zn_ribbon   5 vCsvCggngilnseqg 20 
                    +C +Cgg+ +++ + g
     KHJ30492.1 112 KCRNCGGPHLYQ-KAG 126
                    8**********5.544 PP

>> HscB_4_cys  Co-chaperone HscB tetracysteine metal binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.2     0.075   6.7e+02      19      23 ..      75      79 ..      69      80 .. 0.85
   2 ?    6.3   0.2   0.00091       8.2       1      10 [.      92     101 ..      92     105 .. 0.87
   3 ?    4.4   0.2    0.0038        34       2      10 ..     112     120 ..     112     128 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.075
                B-TTT CS
  HscB_4_cys 19 FCpqC 23
                FC +C
  KHJ30492.1 75 FCKRC 79
                ***** PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.00091
                 -B-SSS--B- CS
  HscB_4_cys   1 PrCWnCGgpg 10 
                 P+C nCG+ +
  KHJ30492.1  92 PSCGNCGSTM 101
                 9******976 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.0038
                 B-SSS--B- CS
  HscB_4_cys   2 rCWnCGgpg 10 
                 +C nCGgp 
  KHJ30492.1 112 KCRNCGGPH 120
                 599****85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1451.85
//
Query:       KHJ30493.1  [L=1077]
Description: putative glycoside hydrolase family 38 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.4e-83  278.2   0.8    1.2e-82  277.5   0.8    1.3  1  Glyco_hydro_38N  Glycosyl hydrolases family 38 N-terminal dom
    5.8e-54  183.4   0.1    9.5e-53  179.4   0.0    2.3  2  Glyco_hydro_38C  Glycosyl hydrolases family 38 C-terminal dom
    6.2e-28   96.8   0.0    1.3e-27   95.8   0.0    1.5  1  Alpha-mann_mid   Alpha mannosidase middle domain
      1e-09   38.3   0.0    4.7e-09   36.2   0.0    2.1  1  Glyco_hydro38C2  Glycosyl hydrolases family 38 C-terminal bet


Domain annotation for each model (and alignments):
>> Glyco_hydro_38N  Glycosyl hydrolases family 38 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  277.5   0.8   2.7e-86   1.2e-82       2     286 ..     284     547 ..     283     550 .. 0.96

  Alignments for each domain:
  == domain 1  score: 277.5 bits;  conditional E-value: 2.7e-86
                      EEEEEEEE--SSSSS-HHHHHCCTCHHHHHHHHHHHHHSTT--EEES-CHHHHHHHCCS-CCCHHHHHHHHHCTSEEECTT-SS-B-SSSS-HH CS
  Glyco_hydro_38N   2 vhvvpHsHiDvgWlktvdeyqrrkvqrilssvlellerdpdrkFilseaslferwweeapeekkelvkklvaegrlevvgGgwvenDealpsge 95 
                      v+ ++H+HiD++Wl+++de+ +rk++r+++++++l+e++p+ +F++s+a++ +++++++p  ++++ +++v+ g ++++gG+wve+D++lpsge
       KHJ30493.1 284 VYGIGHCHIDTCWLWPWDET-KRKIARSWTNQCNLVEQYPEHRFTFSQAQQCKWLQRYYPYVFERV-REKVKIGAFQPIGGSWVEHDTNLPSGE 375
                      799*****************.*********************************************.*************************** PP

                      HHHHHHHCCCHHHHCCH--EESEEEESSSSSB-TCHHHHHHCTT--EEEESSS-HHCHCCHHHTT-SCEEEE-TTSTEEEEEE--TT.SSHCCC CS
  Glyco_hydro_38N  96 slirqlleGqrflkeefgvrpkvaWliDpFGysatlPqllkkaGidsfltqrlsyndknkfaeqkhlefiWrgsdgteilthmlpadsydptyg 189
                      sl rq+l+Gqrf++++fg r++++Wl+D+FGys++lPq+++ aG+++fltq+ls+n++n+f   +h++f+W + dg+++++hm+p++    ty+
       KHJ30493.1 376 SLSRQFLYGQRFFESTFGERCRTFWLPDTFGYSSQLPQVCRLAGLSRFLTQKLSWNNINNF---PHTTFNWVSLDGSQVICHMPPSE----TYT 462
                      *************************************************************...*********************98....899 PP

                      CCC.GGGTTTHHHCHHHHHHCHHHHHTTSSSSEEEEEECEETHCCCCHHHHCCHHHHHHHHHHC....SSEEEEC--H.HHHHHHHHHHS...H CS
  Glyco_hydro_38N 190 fqfdfkrdenvkeraekllaqvkklaektrtnevllplGddfadgqggnteklleeinrsneke....slpkvqfgtp.seYfdalekenaefp 278
                      +++          ++ ++ +++++++++++++++ll++G++  dg+gg+t ++le+++r++  +    +lp+v +g++ +++fd+lek     +
       KHJ30493.1 463 AEA----------EFGDVKRSISQHKSMDQDETSLLVFGKG--DGGGGPTWQHLEKLRRCRGMSdtvgMLPRVHMGNTvDDFFDQLEK-----K 539
                      999..........99**************************..*****************9965588899*****9665*********.....5 PP

                      CE-ESSB- CS
  Glyco_hydro_38N 279 tkdsddfp 286
                       +d+ +++
       KHJ30493.1 540 IEDGLKLV 547
                      55555555 PP

>> Glyco_hydro_38C  Glycosyl hydrolases family 38 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.066     3e+02     131     157 ..     458     484 ..     450     488 .. 0.90
   2 !  179.4   0.0   2.1e-56   9.5e-53       1     214 []     721     929 ..     721     929 .. 0.96

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.066
                      TCEEEEETTTCEEEEESSTTTT...S. CS
  Glyco_hydro_38C 131 aefatdengfgvikRptdqntsweaak 157
                      +e++t+e  fg +kR   q +s ++++
       KHJ30493.1 458 SETYTAEAEFGDVKRSISQHKSMDQDE 484
                      799*****************9998876 PP

  == domain 2  score: 179.4 bits;  conditional E-value: 2.1e-56
                      XTTSS-EEEE.TTTSSEEEEESTTTS-EEE....EEEEEEEEEEECS-S-SSS--BSTT-EEEE--.S-EEECEE-SS-EEEEEEETTES...E CS
  Glyco_hydro_38C   1 leNgflkveidaknGtlksiydkeakrevlke.qvgnqfaayedapdssdaydfkpdneekplevsekeveviesgplvaevtvkfkieaesti 93 
                      l+N  + v++  + G++ s+yd  akrev+++ q  nqf++++d+p +++a+d++ ++ + ++ +  +  ev  ++  + ++++k++i+++s+ 
       KHJ30493.1 721 LKNDQISVTV--ERGCIISLYDLIAKREVIAKgQKANQFVIFDDKPLYWQAWDVEVFHLDSRKILPCEASEVFQQDDHQVTIVTKTRISDKSWA 812
                      6788899999..77******************999*******************************99********************988888 PP

                      EEEEEEE....ECCCCEEEEEEEE-TTECEEEEEEEE---TTCEEEEETTTCEEEEESSTTTT...S..SEGGGG-EEESSEEEEE-SSEEEEE CS
  Glyco_hydro_38C  94 sqeirLy....kgkkriefevkvdweekevllkvafpidiqaefatdengfgvikRptdqntsweaakfeviagnyypiqsfvdlqdesygvav 183
                      ++ i+L      +++++e++ +++w+e +++lkv+fp+di++++a++e+++g+++Rpt++ntsw++akfev      ++++f+dl++  ygv++
       KHJ30493.1 813 KTYIKLSaaisGQQSYVEIDSEIEWREDKKFLKVEFPVDIRNTEASYETQYGIVRRPTNYNTSWDMAKFEV------CCHKFADLSEYGYGVSI 900
                      8888877777799**********************************************************......***************** PP

                      EECS-EEEEE-SSTTEEEEEEEEEBSSS-TT CS
  Glyco_hydro_38C 184 lndskyGvssleqggqleLsLlRrplypdpr 214
                      lnd+kyG+++  +g+ ++LsLlR+p++pd++
       KHJ30493.1 901 LNDCKYGFAT--CGNVMRLSLLRAPKAPDAH 929
                      **********..9****************85 PP

>> Alpha-mann_mid  Alpha mannosidase middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.8   0.0   2.9e-31   1.3e-27       1      91 [.     556     647 ..     556     651 .. 0.96

  Alignments for each domain:
  == domain 1  score: 95.8 bits;  conditional E-value: 2.9e-31
                     EE--GGGTSSCHHHHHHHHHHHHHHHHHHHCCTTT.-SCGC-HHHHHHHHHHHHHHHTCTTTTTT-S-HHHHHHCCHHHHHHHHHHHHHCCC CS
  Alpha-mann_mid   1 elhrgtfTSrarlKrlnrkleslLraaellssaaa.skgyeypkeeleelwkalllnqfHDilpGtsieeVyedaeerlaealkeleklles 91 
                     elhrgt+T++a++Kr nrk+e++Lr++ell++ a+ + +y+ypk+e++++w+a ll+qfHD+lpG+sie++y+d +  +a+++k+++kll++
      KHJ30493.1 556 ELHRGTYTTQAKNKRNNRKCENMLRSIELLATIASiQSDYKYPKKEIDQMWEATLLCQFHDCLPGSSIEMCYDDSDILYAKVFKTGDKLLKE 647
                     79******************************655799*************************************************99875 PP

>> Glyco_hydro38C2  Glycosyl hydrolases family 38 C-terminal beta sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.0   1.1e-12   4.7e-09      12      69 .]    1009    1074 ..     988    1074 .. 0.80

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 1.1e-12
                       T...T--EEEEEEESSSSSBEEE-EETT.SCEEEEE-TTSSB-.........-TTSEEXTTXEEEEE CS
  Glyco_hydro38C2   12 d...eddlllRlynlseegedatlslsqpvksvnvknllEttl.....ape.eleielkPmEIrTfi 69  
                           +++++lR y++ +++++ t+++   vk v ++n+lE++      + + ++ei l+P+EI+Tf+
       KHJ30493.1 1009 LkrqGKSVILRIYESLGGTSKGTIETTLIVKGVFKTNILEDDKirlpfE-DgKIEICLRPFEIATFR 1074
                       044599************************************9776653.269*************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1077 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       620  (0.0345808); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.73u 0.30s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 7239.18
//
Query:       KHJ30494.1  [L=1161]
Description: putative f-box domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.8e-05   24.5   0.3      4e-05   23.4   0.3    1.7  1  F-box-like   F-box-like
  ------ inclusion threshold ------
      0.059   13.7   0.1        3.2    8.1   0.0    3.1  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.3   4.5e-09     4e-05       2      44 ..      64     105 ..      63     109 .. 0.91

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 4.5e-09
  F-box-like   2 srLPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrr 44 
                  rLPdEi++qI+ + +p+  ++l l  rrWr+v +   +L+++
  KHJ30494.1  64 ERLPDEIIVQILLQTDPNGFASLILLNRRWRQVSSQA-YLYSH 105
                 69**********999******************8766.***87 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0   0.00036       3.2      43      75 ..     216     248 ..     185     256 .. 0.89
   2 ?    2.0   0.0     0.029   2.6e+02      42      70 ..     258     287 ..     253     307 .. 0.72
   3 ?   -3.8   0.0       1.8   1.6e+04      53      73 ..    1127    1146 ..    1123    1158 .. 0.67

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00036
  ANAPC4_WD40  43 sLaWkpdgklLavaysdgevrlldaesgkvvhs 75 
                  s+    dg++Lav  sd +v ++d  ++++ h 
   KHJ30494.1 216 SITITDDGSILAVLSSDLQVDIYDLTKKETRHV 248
                  666778**********************99985 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.029
  ANAPC4_WD40  42 rsLaWkpdgklLavaysdg.evrlldaesg 70 
                  r +a +p+g++La ay+ g ev+ l+ ++ 
   KHJ30494.1 258 RTIALSPNGSVLAAAYDAGiEVSSLKQNNN 287
                  578899**********99955665555544 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 1.8
  ANAPC4_WD40   53 Lavaysdgevrlldaesgkvv 73  
                   Lav++++++ ++  ++s++ +
   KHJ30494.1 1127 LAVGHNESKFNINYSSSKQ-L 1146
                   8999999998886555544.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.28s 00:00:01.03 Elapsed: 00:00:00.46
# Mc/sec: 7662.85
//
Query:       KHJ30495.1  [L=1130]
Description: putative rna binding effector protein scp160 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-74  245.7  24.6    6.8e-12   45.0   0.0   10.0  8  KH_1      KH domain
    6.4e-10   38.7  15.8      0.011   15.6   0.4    7.0  7  KH_2      KH domain
     0.0071   16.2  10.3       0.24   11.3   0.1    6.0  7  KH_4      KH domain
  ------ inclusion threshold ------
      0.022   14.6   0.1       0.17   11.8   0.0    2.5  3  Alba      Alba


Domain annotation for each model (and alignments):
>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.0   1.5e-15   6.8e-12       2      65 ..     240     309 ..     239     310 .. 0.85
   2 !   21.3   0.0   3.9e-08   0.00018       5      66 .]     325     405 ..     321     405 .. 0.87
   3 !   31.8   0.0     2e-11     9e-08       4      63 ..     419     474 ..     416     477 .. 0.92
   4 !   33.3   0.0   6.9e-12   3.1e-08       3      65 ..     739     793 ..     737     794 .. 0.91
   5 !   24.7   0.1   3.5e-09   1.6e-05       2      65 ..     805     889 ..     804     890 .. 0.86
   6 !   41.5   3.9   1.9e-14   8.5e-11       2      66 .]     902     968 ..     901     968 .. 0.93
   7 !   15.8   1.6     2e-06     0.009       3      63 ..     980    1046 ..     978    1049 .. 0.77
   8 !   35.9   0.3   1.1e-12     5e-09       1      66 []    1059    1121 ..    1059    1121 .. 0.89

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 1.5e-15
                 EEEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEES.STT........T.-EEEEEESHHHHHHHHHHHH CS
        KH_1   2 lrilvPsslvgriIGkgGsnIkeIreetgakIkvpk.sedeg.....sderevtisGspeavekAkelie 65 
                 ++i++P+s   +iIGk+G +Ik ++e tga+Ik+pk +e++      +++  vt+ G+  a++ A  +i+
  KHJ30495.1 240 TTIPIPRSTRAFIIGKQGTTIKALQESTGARIKLPKvDENSAltyddDEMVDVTLEGNSVAIQLAHTEIN 309
                 689***********************99*******9666666***66666666667*7777****98886 PP

  == domain 2  score: 21.3 bits;  conditional E-value: 3.9e-08
                 EEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEE........SSTT.................T.-EEEEEESHHHHHHHHHHHHH CS
        KH_1   5 lvPsslvgriIGkgGsnIkeIreetgakIkvp........ksedeg..............sderevtisGspeavekAkeliee 66 
                  +P+++  +i Gk  sn+  +++  +++I+vp        +  + +              ++++ +ti+G++++v+ A+++iee
  KHJ30495.1 325 NIPAEFNAFISGKEDSNVCALEQAFNVQIQVPsynfwttqP--P-PskpptghlptflppNGDDLITITGDRADVQSARAKIEE 405
                 689999999**************89*******888775432..2.146779*******************9999********86 PP

  == domain 3  score: 31.8 bits;  conditional E-value: 2e-11
                 EEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT...T.-EEEEEESHHHHHHHHHH CS
        KH_1   4 ilvPsslvgriIGkgGsnIkeIreetgakIkvpksedegsderevtisGspeavekAkel 63 
                 + v++s++ ++IGk+G +     ++tg++I +p s++   +e+ vt+ G ++ +e+A++ 
  KHJ30495.1 419 FMVNNSQHQFVIGKQGVSPEYFFSKTGCSIILP-SDS---NEDSVTVVGHQDHIENAIDY 474
                 789****************************98.665...8********9999****985 PP

  == domain 4  score: 33.3 bits;  conditional E-value: 6.9e-12
                 EEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT...T.-EEEEEESHHHHHHHHHHHH CS
        KH_1   3 rilvPsslvgriIGkgGsnIkeIreetgakIkvpksedegsderevtisGspeavekAkelie 65 
                 ++ +P++++  +IGkgGsnIk+++e+  + I +         +  v+++G++++ e+Ak +i+
  KHJ30495.1 739 KFNFPQKFANQLIGKGGSNIKDLKEKFDVEISIN--------DGFVELKGPKAKSEAAKSHIN 793
                 7899*********************99*****65........458*****9999*****9997 PP

  == domain 5  score: 24.7 bits;  conditional E-value: 3.5e-09
                 EEEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT.........................T.-EEEEEESHHHHHHHHHHHH CS
        KH_1   2 lrilvPsslvgriIGkgGsnIkeIreetgakIkvpksedeg......................sderevtisGspeavekAkelie 65 
                 ++++++  +++ iIG +G  I++++ +++++I +p+ ++ +                      ++++ev i+G++++ ++ +e+i+
  KHJ30495.1 805 YVLKIDPCFHREIIGAQGTQINRLQTRYKVQIYFPR-SAKPakdditnaenssdagrrvsnrsQQPDEVIIKGPKKGADETREEIL 889
                 567888889*****************99*******4.44444578999999***********9999*******9988888888775 PP

  == domain 6  score: 41.5 bits;  conditional E-value: 1.9e-14
                 EEEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEES.STT....T.-EEEEEESHHHHHHHHHHHHH CS
        KH_1   2 lrilvPsslvgriIGkgGsnIkeIreetgakIkvpk.sedeg.sderevtisGspeavekAkeliee 66 
                  ++++ + +++++IG +Gs I eIr+ + akI vp+  +  + s+  ev+i+G++ +v++Ak+liee
  KHJ30495.1 902 ATVSIQAGQIPSLIGQRGSGIEEIRQISTAKIEVPNvKDIKDtSTRVEVQIKGTKSSVAQAKKLIEE 968
                 689999*****************************87777779**********************96 PP

  == domain 7  score: 15.8 bits;  conditional E-value: 2e-06
                  EEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT..............T.-EEEEEESHHHHHHHHHH CS
        KH_1    3 rilvPsslvgriIGkgGsnIkeIreetgakIkvpksedeg...........sderevtisGspeavekAkel 63  
                  ++++++++++++IG++Gs +++I  + g     p ++ ++           sde+++ + G+ e v+k +++
  KHJ30495.1  980 TLEINKEHHRALIGPQGSILRDIILKAGG----P-DDRRElrrlvqfpksdSDENIIKVEGPSEVVDKIIAA 1046
                  789********************997754....5.2223345788888888899999999988878776665 PP

  == domain 8  score: 35.9 bits;  conditional E-value: 1.1e-12
                  EEEEEEGGGHHHHHHTGGGHHHHHHHHHH.T-EEEEESSTT...T.-EEEEEE.SHHHHHHHHHHHHH CS
        KH_1    1 tlrilvPsslvgriIGkgGsnIkeIreet.gakIkvpksedegsderevtisG.speavekAkeliee 66  
                  t++++vP + ++++IG +G+  +++++ t +++  +p+ +   s+ +++ i G +p+ vekAk++i e
  KHJ30495.1 1059 TESVEVPIENHRSLIGHNGQIKRDLEQ-TfNVSLEIPR-QG--SGLSIIKICGlPPN-VEKAKARITE 1121
                  6789***********************.66******95.44..389*******7777.*******975 PP

>> KH_2  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.1   2.9e-05      0.13      29      61 ..     242     273 ..     219     313 .. 0.84
   2 ?    3.3   0.0     0.016        71      28      44 ..     418     434 ..     400     436 .. 0.86
   3 !   10.4   0.2   9.7e-05      0.44      39      62 ..     750     772 ..     747     784 .. 0.82
   4 ?    1.1   0.0     0.076   3.4e+02      39      55 ..     817     833 ..     815     840 .. 0.86
   5 !   15.6   0.4   2.4e-06     0.011      27      65 ..     902     939 ..     895     957 .. 0.79
   6 ?   -2.0   0.0      0.74   3.3e+03      31      51 ..     983    1003 ..     967    1007 .. 0.80
   7 ?   -0.6   0.0      0.27   1.2e+03      39      59 ..    1072    1092 ..    1048    1098 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.9e-05
                 EEEEESCHHHHHTGGGHHHHHHHHHHHHHHHHH CS
        KH_2  29 iviresqpgivIGkgGsnikkigkelrkdiekl 61 
                 i i  s  + +IGk+G +ik++++  + +i+ l
  KHJ30495.1 242 IPIPRSTRAFIIGKQGTTIKALQESTGARIK-L 273
                 5566677899*****************9995.3 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.016
                 EEEEEESCHHHHHTGGG CS
        KH_2  28 iiviresqpgivIGkgG 44 
                 ++++ +sq + vIGk+G
  KHJ30495.1 418 NFMVNNSQHQFVIGKQG 434
                 57899**********99 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 9.7e-05
                 HHTGGGHHHHHHHHHHHHHHHHHH CS
        KH_2  39 vIGkgGsnikkigkelrkdiekle 62 
                 +IGkgGsnik +++++  +i  + 
  KHJ30495.1 750 LIGKGGSNIKDLKEKFDVEIS-IN 772
                 7*************9988884.55 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.076
                 HHTGGGHHHHHHHHHHH CS
        KH_2  39 vIGkgGsnikkigkelr 55 
                 +IG +G  i+++++  +
  KHJ30495.1 817 IIGAQGTQINRLQTRYK 833
                 8***********98765 PP

  == domain 5  score: 15.6 bits;  conditional E-value: 2.4e-06
                 EEEEEEESCHHHHHTGGGHHHHHHHHHHHHHHHHHHTTC CS
        KH_2  27 viiviresqpgivIGkgGsnikkigkelrkdieklegkk 65 
                 +++ i+++q   +IG++Gs i++i++    +ie + + k
  KHJ30495.1 902 ATVSIQAGQIPSLIGQRGSGIEEIRQISTAKIE-VPNVK 939
                 57889***************************8.44443 PP

  == domain 6  score: -2.0 bits;  conditional E-value: 0.74
                  EEESCHHHHHTGGGHHHHHHH CS
        KH_2   31 iresqpgivIGkgGsnikkig 51  
                  i +++   +IG +Gs ++ i 
  KHJ30495.1  983 INKEHHRALIGPQGSILRDII 1003
                  677888899999999888775 PP

  == domain 7  score: -0.6 bits;  conditional E-value: 0.27
                  HHTGGGHHHHHHHHHHHHHHH CS
        KH_2   39 vIGkgGsnikkigkelrkdie 59  
                  +IG++G+  + ++++++  +e
  KHJ30495.1 1072 LIGHNGQIKRDLEQTFNVSLE 1092
                  79******9999999887765 PP

>> KH_4  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.1   5.4e-05      0.24      41      55 ..     250     264 ..     237     268 .. 0.88
   2 ?   -3.5   0.0       2.2   9.9e+03      43      48 ..     429     434 ..     421     434 .. 0.88
   3 ?    2.9   0.0     0.023     1e+02      23      52 ..     730     759 ..     713     763 .. 0.76
   4 ?   -1.7   0.0      0.62   2.8e+03      29      56 ..     803     830 ..     798     833 .. 0.77
   5 ?    2.0   0.1     0.043   1.9e+02      26      58 ..     897     929 ..     892     935 .. 0.85
   6 ?   -0.3   0.0      0.22   9.8e+02      26      52 ..     974    1000 ..     955    1002 .. 0.82
   7 ?   -1.4   0.1      0.49   2.2e+03       7      49 ..    1039    1078 ..    1037    1079 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.4e-05
        KH_4  41 GrvIGkrGrtldAlq 55 
                 + +IGk+G t++Alq
  KHJ30495.1 250 AFIIGKQGTTIKALQ 264
                 679***********9 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.2
        KH_4  43 vIGkrG 48 
                 vIGk+G
  KHJ30495.1 429 VIGKQG 434
                 9****9 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.023
        KH_4  23 eeeeeeveielnvegedlGrvIGkrGrtld 52 
                 +e+e++  ++ n+ ++    +IGk G +++
  KHJ30495.1 730 DEKERDFILKFNFPQKFANQLIGKGGSNIK 759
                 25667777777888888999*******997 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 0.62
        KH_4  29 veielnvegedlGrvIGkrGrtldAlqy 56 
                 v++ l++++     +IG +G  ++ lq+
  KHJ30495.1 803 VTYVLKIDPCFHREIIGAQGTQINRLQT 830
                 556666666666679******9999987 PP

  == domain 5  score: 2.0 bits;  conditional E-value: 0.043
        KH_4  26 eeeveielnvegedlGrvIGkrGrtldAlqylv 58 
                 +++ + +++++  ++  +IG rG  +  ++++ 
  KHJ30495.1 897 DNSYTATVSIQAGQIPSLIGQRGSGIEEIRQIS 929
                 66778889999999**********999998875 PP

  == domain 6  score: -0.3 bits;  conditional E-value: 0.22
        KH_4   26 eeeveielnvegedlGrvIGkrGrtld 52  
                  +++v+ +l++++e+   +IG +G +l+
  KHJ30495.1  974 DNTVVKTLEINKEHHRALIGPQGSILR 1000
                  7888889999999999*******9985 PP

  == domain 7  score: -1.4 bits;  conditional E-value: 0.49
        KH_4    7 ilkalvddpeevevteeeeeeeveielnvegedlGrvIGkrGr 49  
                  ++++++ +++++  + e   ++ +  ++v  e+   +IG +G+
  KHJ30495.1 1039 VVDKIIAAMQNIVLDRE---SRITESVEVPIENHRSLIGHNGQ 1078
                  66777777777777776...34444455555555568998888 PP

>> Alba  Alba
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.7e-05      0.17      16      64 ..     422     493 ..     418     496 .. 0.81
   2 ?   -2.9   0.0       1.4   6.2e+03      24      34 ..     866     876 ..     833     876 .. 0.75
   3 ?   -2.5   0.1         1   4.7e+03      10      26 ..     954     970 ..     948     988 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.7e-05
                 HHHHHHH.......................THTTESEEEEEEETTHHHHHHHHHHHHHHHTCTT.EEEEEEE CS
        Alba  16 kralklL.......................snkkeeeVvlkatGraIskAvsvaeilkrrfgkglyqvnvlt 64 
                 +  ++++                       s+++e++V++++   +I++A++ a  l + ++  l+ + +l+
  KHJ30495.1 422 NNSQHQFvigkqgvspeyffsktgcsiilpSDSNEDSVTVVGHQDHIENAIDYAIDLASSMNQTLIDISKLY 493
                 55566666666666666667777777777899*****************************99**9999986 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.4
                 HTTESEEEEEE CS
        Alba  24 nkkeeeVvlka 34 
                 +++ +eV++k+
  KHJ30495.1 866 SQQPDEVIIKG 876
                 578999**998 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1
                 -HHHHHHHHHHHHTHTT CS
        Alba  10 pimsyvkralklLsnkk 26 
                   +s+v +a+kl+++kk
  KHJ30495.1 954 GTKSSVAQAKKLIEEKK 970
                 46888999999984444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1130 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       693  (0.0386525); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.79u 0.28s 00:00:01.07 Elapsed: 00:00:00.46
# Mc/sec: 7428.89
//
Query:       KHJ30496.1  [L=218]
Description: putative short-chain dehydrogenase reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      9e-07   28.5   0.0     0.0001   21.8   0.0    2.1  2  adh_short     short chain dehydrogenase
    0.00062   19.4   0.0     0.0057   16.2   0.0    1.9  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
  ------ inclusion threshold ------
      0.076   13.3   0.0       0.12   12.7   0.0    1.2  1  CBM_6         Carbohydrate binding module (family 6)


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.6   0.0    0.0032        19      86     126 ..      48      89 ..      15      92 .. 0.77
   2 !   21.8   0.0   1.7e-08    0.0001     140     191 ..     121     175 ..     110     178 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0032
                 -S.S--SSGGGCSHHHHHHHHHHHTHHHHHHHHHHHHHHHHC CS
   adh_short  86 Gi.tgsgpfselseeewervievNltgvflltravlpamlkq 126
                 Gi +  ++ s+++ ++  +++++N  g++l+ +++ p +  +
  KHJ30496.1  48 GIlHPEKSPSQMNHTDLIETFAINSIGPMLVFKHFSPFLPGK 89 
                 5556667778999999********************998754 PP

  == domain 2  score: 21.8 bits;  conditional E-value: 1.7e-08
                 TSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGT...EEEEEEEESSBSSHHHHHHC CS
   adh_short 140 kvpvagvaaYsAsKaavagltrslakelaptg...irvnavaPGlvdTdmakelr 191
                  + + g+ +Y AsKaav+++t+s+   l+++       ++ +PG v+Td+ ke  
  KHJ30496.1 121 DNNLGGWYSYRASKAAVNSFTKSFDLYLQTRTggnAMAISYHPGTVKTDLSKEYW 175
                 56778999*****************99998766677788889********99875 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   9.5e-07    0.0057      52     182 ..      17     174 ..      15     185 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 9.5e-07
                   SHHHHHHHHHHHHHHH.....SSEEEEEE-----EGCSS-GGGH-HHHHHHHHHHHTHHHHHHHHHHHHHCTSC.................CEEEEE CS
  adh_short_C2  52 deeqvealveevvekf.....gklDilvnnagiapklkgpfletsreefdraldvnlyslfllakaalplmkeg.................gsivnl 126
                   de+++ +++ee+++ f     + l+ ++   gi ++ +++  +++  ++ +++++n  + +l+ k++ p +  +                 +  +n+
    KHJ30496.1  17 DESTISRAAEEAKSMFqsptaNPLHLAFCMPGILHP-EKSPSQMNHTDLIETFAINSIGPMLVFKHFSPFLPGKkntpfqsqtdssllptqAIWLNM 112
                   666777777777777644444568888888899999.89999***************************5543335778777886566543334667 PP

                   EEGGGTSBSTTTT...HHHHHHHHHHHHHHHHHHHHGG.GTEEEEEEE..E--BHCTGGGGS CS
  adh_short_C2 127 ssvgaervvpnyn...aygaaKaalealtrylAvelgp.kgiRvNavs..pgpikTlaasgi 182
                   s   ++++ +n      y a+Kaa++++t+++   l    g    a+s  pg +kT++++++
    KHJ30496.1 113 SARVGSISDNNLGgwySYRASKAAVNSFTKSFDLYLQTrTGGNAMAISyhPGTVKTDLSKEY 174
                   7666666666665877899************9999987568888888777999999988765 PP

>> CBM_6  Carbohydrate binding module (family 6)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0     2e-05      0.12      73     117 ..     115     158 ..     104     162 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2e-05
                 EEEEEEE---SSTTEEEEEEEEEEE-SEEEEEEEEEECSST---E CS
       CBM_6  73 lvgtvsvpstggwqtyvtvsanvtlptGvhdlylvftggaeylfn 117
                  vg++s ++ ggw++y+  +a+v++ t + dlyl++++g+ + + 
  KHJ30496.1 115 RVGSISDNNLGGWYSYRASKAAVNSFTKSFDLYLQTRTGG-NAMA 158
                 5777888889**************************9976.5555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       219  (0.0122148); expected 358.6 (0.02)
Passed bias filter:                      206  (0.0114898); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1666.41
//
Query:       KHJ30497.1  [L=76]
Description: putative short-chain dehydrogenase reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.018   14.5   0.0      0.019   14.4   0.0    1.0  1  adh_short  short chain dehydrogenase
      0.022   14.6   0.0      0.024   14.6   0.0    1.0  1  KR         KR domain


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   2.1e-06     0.019       2      60 ..       3      66 ..       2      73 .. 0.67

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.1e-06
                EEEEESTTSHHHHHHHHHHHHTT-EEEE.EESCHHHHHHHHHHHHHT......TSEEEEEE-TTTS CS
   adh_short  2 vvlvtGassGIGraiakelakeGakvvv.vdrseekleevakelkee......gakalaiqvDvtd 60
                +++vt as+GIG  + ++l++     +v ++r++ +   v+k++ +e      ++++ ++++Dvt 
  KHJ30497.1  3 WAFVTPASRGIGFHLTRHLLQHTKLPIVaTARKDVA--IVKKSILSElpvsvdEERLKVLPLDVTG 66
                689*****************9865555535555444..4555444433333666667777777774 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   2.7e-06     0.024       4      67 ..       5      69 ..       2      73 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.7e-06
                EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT..T-EEEE----TT-HHH CS
          KR  4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal..gaevevvaaDvsdkda 67
                ++t +  g+G +l+r+l+++ +  +v ++R+  +   +k+ ++el  +  + + +v+++Dv+ +++
  KHJ30497.1  5 FVTPASRGIGFHLTRHLLQHTKLPIVATARK-DVAIVKKSILSELPVSvdEERLKVLPLDVTGNKK 69
                6788889************************.7777888899998765457799999999997765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       307  (0.0171231); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.21s 00:00:00.55 Elapsed: 00:00:00.36
# Mc/sec: 624.04
//
Query:       KHJ30498.1  [L=120]
Description: putative trna-dihydrouridine synthase c [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       559  (0.0311785); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 893.83
//
Query:       KHJ30499.1  [L=93]
Description: putative sucrose transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       226  (0.0126053); expected 358.6 (0.02)
Passed bias filter:                      158  (0.00881254); expected 358.6 (0.02)
Passed Vit filter:                         3  (0.000167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.24s 00:00:00.56 Elapsed: 00:00:00.36
# Mc/sec: 764.93
//
Query:       KHJ30500.1  [L=787]
Description: putative vacuolar calcium ion transporter protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-33  114.6  38.8    1.1e-21   77.4  16.9    3.2  3  Na_Ca_ex  Sodium/calcium exchanger protein


Domain annotation for each model (and alignments):
>> Na_Ca_ex  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   2.5   0.00075        13       4      54 ..      99     146 ..      79     179 .. 0.81
   2 !   43.5   3.8   1.7e-15   3.1e-11      57     150 ..     195     302 ..     191     303 .. 0.85
   3 !   77.4  16.9   5.9e-26   1.1e-21       2     150 ..     611     755 ..     610     756 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.00075
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHH CS
    Na_Ca_ex   4 vlfilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElis 54 
                 ++f +  ++i++la +l+ ++e++a      g ++G +++ +++++ Eli+
  KHJ30500.1  99 IVFGVNAAAIIPLAGLLSHATESVA---QRMGDTVGALMNVTFGNAVELII 146
                 5677778888999999999999999...67777888888888888888875 PP

  == domain 2  score: 43.5 bits;  conditional E-value: 1.7e-15
                 HHHHT.TTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCECCHHHHHHHHHHHHHHHHHHHTCHHHHH...............HTEEHHHHHHHHH CS
    Na_Ca_ex  57 iaalt.gevdlaignvlGsnifnlllviGlialigslkvdseslkldlgllllvallllllvlllllplfv...............pgrltvleglvll 139
                 + al+ +e++++ +++lGs+++nlll++G+++lig+l +  e+l ++  ++ l a+ll+l+v+ lllp+++                 ++++ +++vll
  KHJ30500.1 195 SIALQkDEIRIVQASLLGSILANLLLILGMCFLIGGLRYL-EQL-YNSKVTKLSACLLSLSVMSLLLPTAFhasfkdsqeikttnaVLKVSRGTSVVLL 291
                 55554277****************************5444.553.444477888888888888889999999*************************** PP

                 HHHHHHHHHHH CS
    Na_Ca_ex 140 llYalylvlsl 150
                 ++Y +yl+++l
  KHJ30500.1 292 MVYSMYLLFQL 302
                 *********98 PP

  == domain 3  score: 77.4 bits;  conditional E-value: 5.9e-26
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH.HHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCEC CS
    Na_Ca_ex   2 lfvlfilslllisvladflvssaeeia.kslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigslkvdsesl 99 
                 +++l+i+s+ l++v+a+f+v+s+  ++ +  g+s++++G+++l++++++ E+++++++a+++++dlaig ++Gs i++ l+v +l++l+g+  ++++s 
  KHJ30500.1 611 SVFLLIISTCLVAVCAEFMVDSIRDVVkDDAGLSEAFIGIIILPIVGNAAEHVTAVTVAAKNKMDLAIGVAIGSSIQIALFVTPLVVLLGWCMNKELS- 708
                 6899***********************559*************************************************************6666655. PP

                 CHHHHHHHHHHHHHHHHHHHTCHHHHHHTEEHHHHHHHHHHHHHHHHHHHH CS
    Na_Ca_ex 100 kldlgllllvallllllvlllllplfvpgrltvleglvllllYalylvlsl 150
                  l + l+ +v+l+++++++ +l +l  +gr ++leg++l+++Y++++v ++
  KHJ30500.1 709 -LLFTLFETVSLFVSAFIVNFL-VL--DGRSNYLEGALLCAAYVMIAVAAF 755
                 .555558888888877666655.44..4*****************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (787 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       933  (0.0520386); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.23s 00:00:00.86 Elapsed: 00:00:00.39
# Mc/sec: 6112.05
//
Query:       KHJ30501.1  [L=692]
Description: putative atp-dependent rna helicase rok1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-29  103.4   0.2    3.7e-29  101.7   0.2    1.9  2  DEAD        DEAD/DEAH box helicase
    6.7e-27   94.0   0.1    6.8e-26   90.8   0.0    2.6  2  Helicase_C  Helicase conserved C-terminal domain
    1.6e-08   34.8   0.0      9e-08   32.3   0.0    2.2  2  ResIII      Type III restriction enzyme, res subunit
     0.0073   15.1   0.0      0.013   14.3   0.0    1.3  1  SNF2_N      SNF2 family N-terminal domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.7   0.2   8.3e-33   3.7e-29       1     175 [.     180     392 ..     180     393 .. 0.76
   2 ?   -2.0   0.0      0.59   2.6e+03      19      43 ..     594     619 ..     575     655 .. 0.76

  Alignments for each domain:
  == domain 1  score: 101.7 bits;  conditional E-value: 8.3e-33
                 -HHHHHHHHHHH...............TTCEEEEEESTTSSHHHHHHHHHHHHHHHS......TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEE CS
                 xxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplil...............gggdvlvaaeTGsGKTlaflipvlqivyet......kgktgpkalivePtreLaeqtlnnlkkfkkyidlrv 78 
                 t++Q +++pl+l               ++ ++lv a+TGsGKTlaflip++++++++      k  +   al+v+Pt+eLa q+l ++k + + ++++v
  KHJ30501.1 180 TEVQMASLPLLLrpeialkqssdslngSDMNLLVVAPTGSGKTLAFLIPIIDQILQRrrksenKAAHILEALVVAPTKELADQILYEAKILSEGTGVKV 278
                 577888888888655555544444432336889******************9999988877666666699***********************999666 PP

                 EEEETT..............SSHHHHHHHH....H.TTCSEEEEEHHHHHHHH....HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCT CS
                 xxxxxx..............xxxxxxxxxx....x.xxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  79 lliigg..............vaardqlskl....d.ngvdivvgtpgrlddll....stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitc 154
                 + + +g                a++q ++l    +  ++di+v+tpg l++ l    ++ +l l +vr+lVlDEad lld  f ++ ++i ++l   tc
  KHJ30501.1 279 SGMRKGlkvvdeditpqntpGCAENQTKTLvpkqSiTKADILVTTPGILLNSLknnsTSTSLCLPSVRTLVLDEADILLDPLFYEQTSSIWAAL---TC 374
                 65544444444444445544334455555545321355*************886764344588*******************************...66 PP

                 TSTTTSEEEEEESSBSHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxx RF
        DEAD 155 dgklqrqvivlSATlpkdvkk 175
                     + ++ + SAT++++v++
  KHJ30501.1 375 P---NLRTTLWSATISSSVEN 392
                 4...3459********99986 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.59
                 EEESTTSSHHHHHHHHHHHHHHHS.T CS
                 xxxxxxxxxxxxxxxxxxxxxxxx.x RF
        DEAD  19 vaaeTGsGKTlaflipvlqivyet.k 43 
                 ++ + G GK   +l+ +l ++ +t k
  KHJ30501.1 594 ICTNNGNGKGNTWLLDILPKLDKTdK 619
                 77888999999999999988855432 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1      0.43   1.9e+03      32      56 ..     105     129 ..      91     144 .. 0.73
   2 !   90.8   0.0   1.5e-29   6.8e-26      16     111 .]     458     560 ..     436     560 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.43
                 HHHHHHHTTSTEEEESTTSTHHHHH CS
  Helicase_C  32 vklllekkgikvavlhgelpqnere 56 
                 ++ +l++++ik+ +l+++ +++++ 
  KHJ30501.1 105 CRKVLHSHKIKINILNSRKTSKKKS 129
                 4555677799*******88877765 PP

  == domain 2  score: 90.8 bits;  conditional E-value: 1.5e-29
                 TSEEEEEESSHHHHHH..HHHH..HHHT.....TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHT CS
  Helicase_C  16 ggkilifvntidrlek..vkll..lekk.....gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqriG 105
                 +  i+if++ti r+     +ll           + + avlh++l+ + r+ +l++f++ge+ +Li+td+++rG+d+ +vn Vin+d+p + +syi+r+G
  KHJ30501.1 458 RPPIIIFTQTIPRATAlyDELLydI--PpqaggSSRLAVLHSSLSDKARLTTLNRFRSGEVWILITTDILSRGVDFRGVNAVINYDIPNDAASYIHRVG 554
                 5679********8865544444440..1555678***************************************************************** PP

                 TSSSTT CS
  Helicase_C 106 RtgRag 111
                 RtgR g
  KHJ30501.1 555 RTGRCG 560
                 ****86 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.2      0.32   1.4e+03     100     121 ..     110     131 ..      42     178 .. 0.64
   2 !   32.3   0.0     2e-11     9e-08      17     140 ..     202     352 ..     165     364 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.32
                 ....-SEEEEEHHHHHHTH... CS
      ResIII 100 dstnkkilvttiqsldadseee 121
                 +s+++ki + +  + +++++++
  KHJ30501.1 110 HSHKIKINILNSRKTSKKKSNK 131
                 4444444444444444444333 PP

  == domain 2  score: 32.3 bits;  conditional E-value: 2e-11
                 ......TTSEEEEEESTTSTHHHHH.HHHHHHH-S.............-EEEEESSHHHHHHHHHHGGGGTGG..............GEEEESSS-B-- CS
      ResIII  17 eklkskrdkrglikmaTGtGKTlva.aklierllkkgkee........kflflvprkslleqtleefkkflseayke..........igkkvsgdkkka 96 
                 ++l+   d ++l++++TG+GKTl   + +i+++l+ ++++        ++l+++p+k+l +q l e k +++ +  +          +           
  KHJ30501.1 202 DSLN-GSDMNLLVVAPTGSGKTLAFlIPIIDQILQRRRKSenkaahilEALVVAPTKELADQILYEAKILSEGTGVKvsgmrkglkvV----------D 289
                 4443.5566899***********9999********9888899**********************999777777655544443333331..........1 PP

                 ...........................-SEEEEEHHHHHHTH........HHHTTT-SEEEEET CS
      ResIII  97 ....................kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDE 140
                                      ++++t+++ilvtt   l +++++ +++s++l   +   ++ DE
  KHJ30501.1 290 editpqntpgcaenqtktlvPKQSITKADILVTTPGILLNSLKN-NSTSTSLCLPSVRTLVLDE 352
                 22224455556666677888899999*******99999998844.4444444444445556666 PP

>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   2.8e-06     0.013      64     189 ..     217     356 ..     205     374 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.8e-06
                 TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--H.HHHHHHHHHHHHH-TTS-EEE--SSHHHH...............------------ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxx RF
      SNF2_N  64 mGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPa.slldqWeneierhvsssalrvlvyggqkk...............mkkkntkvapkl 146
                 +G GKT+  l  i  q  ++ +++  ++k      +L+v+P+ +l+dq   e +   ++  ++v  + ++ k               +++ +t v ++ 
  KHJ30501.1 217 TGSGKTLAFLIPIIDQILQRRRKS--ENKAAHILEALVVAPTkELADQILYEAKILSEGTGVKVSGMRKGLKvvdeditpqntpgcaENQTKTLVPKQS 313
                 699******999997777555555..4577777779******9*****9999888888887766666665559************87677777788889 PP

                 -----EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 147 ladydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtl 189
                  +++d+++tt  +l +  + +   + l   + + +vlDE+  l
  KHJ30501.1 314 ITKADILVTTPGILLNSLKNNSTSTSLCLPSVRTLVLDEADIL 356
                 99*************9999999******************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (692 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4809.58
//
Query:       KHJ30502.1  [L=105]
Description: putative small nuclear ribonucleoprotein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-16   57.9   0.4    1.7e-13   50.1   0.1    2.1  2  LSM       LSM domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0004       7.2       2      19 ..      10      27 ..       9      37 .. 0.89
   2 !   50.1   0.1   9.2e-18   1.7e-13      20      67 .]      43      89 ..      42      89 .. 0.96

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0004
                HHHHTTTSEEEEEETTSE CS
         LSM  2 flkklinkkvtvelkngr 19
                +++k++++k++v +k+++
  KHJ30502.1 10 LIDKCVGSKIWVVMKGDK 27
                689************975 PP

  == domain 2  score: 50.1 bits;  conditional E-value: 9.2e-18
                EEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEEEE CS
         LSM 20 elrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivlisl 67
                e+ G+L gfD+++N+vLedv+e++ ++  ++kl+++l++Gn+i+++++
  KHJ30502.1 43 EFCGVLLGFDDYVNMVLEDVTEIDYSG-GQTKLSKILLNGNHICMLIP 89
                689************************.*****************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       206  (0.0114898); expected 358.6 (0.02)
Passed bias filter:                      191  (0.0106531); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 812.67
//
Query:       KHJ30503.1  [L=221]
Description: hypothetical protein EV44_g3310 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.015   15.0   0.0      0.022   14.4   0.0    1.2  1  Med4      Vitamin-D-receptor interacting Mediator subunit 4
       0.35   11.0   3.4        1.7    8.8   3.4    2.1  1  DUF4150   Domain of unknown function (DUF4150)


Domain annotation for each model (and alignments):
>> Med4  Vitamin-D-receptor interacting Mediator subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   2.5e-06     0.022      49     169 ..      28     136 ..      22     157 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.5e-06
        Med4  49 vksLkeyekeLkavpdqenskldtasiklaekrevdseeLLdYArrISkytsvppaepkasvtkeptswldemlrgaafrPwPt...EdeiRmGlLaal 144
                 v+++ ++ +eL+++p     +      + + ++ev ++e+L Y ++IS  ts        +v + p s+ +   +     P+P    +  +RmG + +l
  KHJ30503.1  28 VREVQDLANELESLP-----DF---RLARGSEKEVYVHEILGYQQQISTPTSS------TNVPIPPISFPPS--SVPSPTPYPNidhDGDVRMGDINTL 110
                 678888888899998.....44...6789999********************9......7888999999943..3444579995444889999999999 PP

        Med4 145 qlaaaegeer.pgedpeeeeerksee 169
                 q + +  +    + +  ++++++++e
  KHJ30503.1 111 QTQMQSLVAAiSNLNIHNNPNNRKTE 136
                 98877554331333344444444444 PP

>> DUF4150  Domain of unknown function (DUF4150)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   3.4   0.00019       1.7      13      47 ..      83     117 ..      60     128 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00019
     DUF4150  13 pagpsvvPiPYpniaksadaakgtktVlidgkpvl 47 
                 p+ + + P PYpni++  d   g  + l ++++ l
  KHJ30503.1  83 PPSSVPSPTPYPNIDHDGDVRMGDINTLQTQMQSL 117
                 666778*************9999999988888774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       604  (0.0336884); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1617.76
//
Query:       KHJ30504.1  [L=367]
Description: hypothetical protein EV44_g3147 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2760.31
//
Query:       KHJ30505.1  [L=227]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       278  (0.0155056); expected 358.6 (0.02)
Passed bias filter:                      235  (0.0131073); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1791.39
//
Query:       KHJ30506.1  [L=257]
Description: putative phosphoserine phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.1e-22   79.5   0.0    5.3e-22   79.1   0.0    1.1  1  HAD              haloacid dehalogenase-like hydrolase
      5e-06   26.1   0.0      0.025   14.0   0.1    2.1  2  Put_Phosphatase  Putative Phosphatase
    0.00011   21.8   0.0    0.00017   21.2   0.0    1.4  1  UMPH-1           Pyrimidine 5'-nucleotidase (UMPH-1)
  ------ inclusion threshold ------
      0.059   13.7   0.4        2.2    8.5   0.0    2.8  2  Hydrolase        haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> HAD  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.1   0.0   1.2e-25   5.3e-22       2     188 .]      18     198 ..      17     198 .. 0.79

  Alignments for each domain:
  == domain 1  score: 79.1 bits;  conditional E-value: 1.2e-25
         HAD   2 lfDfDgTLldgdslelllrfllrrgaprlwralreklllalfrellrldraglaelleallaglseelaaelerfvaevirpklldpgalellaahraa 100
                 + DfDgT++ +ds+++l++  l+      +  ++++  ++ + ++ +++r++l+++l++   +++e +++ le+ +   ++   + p++ e+++    +
  KHJ30506.1  18 FTDFDGTITVNDSNDYLTD-NLG------FGQVLRRQGNINILDGKQSFREALQQMLDSVQLPFNE-CIKVLEENI---KLDP-YFPEFFEFCS---MN 101
                 89*****************.666......4455555566666788888666666666665555544.334444444...3333.4489999999...** PP

         HAD 101 GdrvvvvSgglrplvepll.aelg....adevlatelevdd....rltge....lglegkpvrgegkvaalrewlaaegegidleevvayGDspsDlpl 186
                 ++++v++Sgg++p++++ll ++ g    +++++++++ ++d        +    ++ ++++ +g++k ++++   +a+  + +++++++ GD++sDl +
  KHJ30506.1 102 NIPIVILSGGMEPIIRALLhKFIGedasSIQIVSNDVISRDgkqiNE--KggwkIKFHDDSDFGHDKSREIKP--YANLPPNKRPTLFYAGDGVSDLSA 196
                 *******************99**************999999997633..2346699*****************..777777777889999********9 PP

         HAD 187 lr 188
                 ++
  KHJ30506.1 197 AK 198
                 96 PP

>> Put_Phosphatase  Putative Phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.1   5.6e-06     0.025       4     107 ..      18     120 ..      15     161 .. 0.73
   2 !   10.3   0.0   7.4e-05      0.33     171     213 ..     183     222 ..     174     239 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 5.6e-06
  Put_Phosphatase   4 vfDFDktiidedsdnwvvdelpatelfee...lretlrkglwnelmdrvlkelheqgvseadikkvlrsiplspglvelikslakkkleldlii 94 
                        DFD ti  +ds++ ++d l++ ++ ++   ++    k+ + e ++++l  ++      + ik   ++i l+p + e +++++   +++ ++i
       KHJ30506.1  18 FTDFDGTITVNDSNDYLTDNLGFGQVLRRqgnINILDGKQSFREALQQMLDSVQLP--FNECIKVLEENIKLDPYFPEFFEFCSM--NNIPIVI 107
                      56********************9887654111444445566777777776665443..334456666799*************54..6688888 PP

  Put_Phosphatase  95 iSDaNsffieeil 107
                      +S   +  i  +l
       KHJ30506.1 108 LSGGMEPIIRALL 120
                      8876665555555 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 7.4e-05
  Put_Phosphatase 171 rliYvGDganDlCpvlklrekDvampRkgfpleklisenksll 213
                       l+Y GDg  Dl +    +e+D+ +++kg++l +   ++k  +
       KHJ30506.1 183 TLFYAGDGVSDLSAA---KETDLLFAKKGYDLVTYCLREKVPF 222
                      69*********9875...689***********99888877665 PP

>> UMPH-1  Pyrimidine 5'-nucleotidase (UMPH-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   3.9e-08   0.00017      85     142 ..      81     139 ..      56     176 .. 0.86

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 3.9e-08
      UMPH-1  85 keskialrdgveelfekleklnvPvlifsaGlgdvleevlrqa.nvvysnvkvvsnfld 142
                  e +i+l   + e+fe  + +n+P++i s G+  ++  +l++  +   s +++vsn + 
  KHJ30506.1  81 LEENIKLDPYFPEFFEFCSMNNIPIVILSGGMEPIIRALLHKFiGEDASSIQIVSNDVI 139
                 455778888899******************************9999**********875 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.4     0.088     4e+02       4      14 ..      17      29 ..      16      47 .. 0.72
   2 ?    8.5   0.0   0.00049       2.2     112     160 ..      80     134 ..      38     201 .. 0.64

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.088
                EEEESBTTTB..C CS
                xxxxxxxxxx..x RF
   Hydrolase  4 vvfDkdGTLt..t 14
                ++ D+dGT+t  +
  KHJ30506.1 17 FFTDFDGTITvnD 29
                578*******322 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00049
                 HHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH.TT.....GGGE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx.....xxxx RF
   Hydrolase 112 tiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanq.lG.....ddyf 160
                  +++++k+ p   e+++    ++i++v+l+g+ +   ++++++ +G      +++
  KHJ30506.1  80 VLEENIKLDPYFPEFFEFCSMNNIPIVILSGGMEPIIRALLHKfIGedassIQIV 134
                 4557777888888999999989****************99999999543332222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 1870.44
//
Query:       KHJ30507.1  [L=417]
Description: putative mitochondrion biogenesis protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-84  282.7   4.3    2.2e-84  282.2   4.3    1.2  1  She9_MDM33     She9 / Mdm33 family
    0.00048   19.8   3.7    0.00081   19.0   3.7    1.2  1  PspA_IM30      PspA/IM30 family
  ------ inclusion threshold ------
      0.016   15.2   4.8       0.12   12.4   0.1    2.3  2  YscO           Type III secretion protein YscO
      0.032   14.3   2.6      0.088   12.8   0.1    2.2  2  YscO-like      YscO-like protein
      0.082   13.1   4.3        1.9    8.6   0.2    2.2  2  Tropomyosin_1  Tropomyosin like
       0.09   13.0   3.0        2.6    8.4   0.2    2.7  2  ABC_tran_CTD   ABC transporter C-terminal domain
      0.095   13.1   3.1        1.5    9.2   0.4    2.7  2  DASH_Hsk3      DASH complex subunit Hsk3 like
       0.13   12.0   1.3       0.26   11.1   1.3    1.4  1  PsbH           Photosystem II 10 kDa phosphoprotein
       0.16   12.2   7.0        2.3    8.4   1.7    2.6  2  FliJ           Flagellar FliJ protein
       0.59   10.6   4.8        1.7    9.1   0.4    2.6  2  ZapB           Cell division protein ZapB
        1.2    9.5   5.9       0.85    9.9   3.8    1.9  2  DUF5082        Domain of unknown function (DUF5082)
        5.7    7.0   6.0        5.5    7.0   0.2    2.6  2  Sugarporin_N   Maltoporin periplasmic N-terminal extension


Domain annotation for each model (and alignments):
>> She9_MDM33  She9 / Mdm33 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  282.2   4.3   1.4e-87   2.2e-84       2     195 ..      95     288 ..      94     291 .. 0.98

  Alignments for each domain:
  == domain 1  score: 282.2 bits;  conditional E-value: 1.4e-87
  She9_MDM33   2 skkleelldslqetlltaskalndvtGYseieklkksieeleeeleeakeevreakeayeeaiekrsksqrevneLLqRkssWspedlerftelyrkdh 100
                 +kk+++l+d+lq +++tas+++nd+tGYs ie+lk++i++le++l++a+++vr+a+ +y++++++r++sqrev++LL+Rk+sWsp+dlerft+lyr dh
  KHJ30507.1  95 TKKFSQLMDRLQGNIFTASQRINDITGYSGIEALKNQIASLEKNLQDAQNAVRAARITYKTTVADRASSQREVTTLLARKDSWSPSDLERFTTLYRMDH 193
                 699************************************************************************************************ PP

  She9_MDM33 101 anekeeeeakeklkeaeakeeelseeLtksiLtRYHEEqiWSDkiRraStwgtlvlmgvNvllfvvlqllvEPwkRrrLvesfeekvkealeevk 195
                 +ne++++ea+++l+++e+++e++s++L +siL+RYHEEqiWSDkiRr+Stwgt++lmgvNv+lf+v+q+ +EPw+R+rL+++fe kv eale +k
  KHJ30507.1 194 TNEQAVQEAATRLADVEREVEHASSQLRNSILSRYHEEQIWSDKIRRMSTWGTWGLMGVNVILFFVFQFGFEPWRRKRLIQGFEGKVLEALEMEK 288
                 ****************************************************************************************9998765 PP

>> PspA_IM30  PspA/IM30 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   3.7   5.4e-07   0.00081      17     109 ..     124     222 ..     122     228 .. 0.92

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 5.4e-07
   PspA_IM30  17 lldkaeDPekileqairdmqselakarqalaqviarqkqlerkleeqkeqakklekkAkaALtkg......eeeLArealaeikslekqaealetqlaq 109
                 +++++ +    le+ ++d+q+++++ar +   ++a++ +++r++ +  +++ ++  +  + +t        +e++ +ea++++++ e ++e  + ql +
  KHJ30507.1 124 GIEALKNQIASLEKNLQDAQNAVRAARITYKTTVADRASSQREVTTLLARKDSWSPSDLERFTTLyrmdhtNEQAVQEAATRLADVEREVEHASSQLRN 222
                 566677777889*******************************************9999999888889999********************99998865 PP

>> YscO  Type III secretion protein YscO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   7.7e-05      0.12      63     119 ..     120     169 ..      88     185 .. 0.59
   2 ?    4.0   1.0     0.029        43      16      46 ..     196     226 ..     187     240 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.7e-05
                 --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YscO  63 vllkelekvkqqvalLrekeaelekqveeakqqleaerealrqarkelqearraveK 119
                    +        + +L+++ a+lek++++a++ ++a+r + +   +  +  +r+v  
  KHJ30507.1 120 TGYSG-------IEALKNQIASLEKNLQDAQNAVRAARITYKTTVADRASSQREVTT 169
                 44444.......555666666666666666666666665555555555555555544 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.029
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YscO  16 ekalkrqeqalaeareaheqaresladyraw 46 
                 e+a++ +  +la++++++e a+++l++    
  KHJ30507.1 196 EQAVQEAATRLADVEREVEHASSQLRNSILS 226
                 5555555666666666666666666555444 PP

>> YscO-like  YscO-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   5.9e-05     0.088      54     132 ..      96     178 ..      84     187 .. 0.85
   2 ?    0.9   0.5      0.27   4.1e+02      13      57 ..     195     239 ..     184     244 .. 0.62

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 5.9e-05
                 HHHHHHHHHHHH-..--HHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   YscO-like  54 aKvaqlreeldkG..ttsdkikkmkry..ikvvkeelkqeekkvekQkekVkvAerkvEqareelakkrkeveklekhkeewl 132
                 +K +ql + l+    t+s++i+ +  y  i+ +k++++  ek++++ +++V++A+        + a  ++ev  l   k+ w 
  KHJ30507.1  96 KKFSQLMDRLQGNifTASQRINDITGYsgIEALKNQIASLEKNLQDAQNAVRAARITYKTTVADRASSQREVTTLLARKDSWS 178
                 5666666666533338999*****99977899********************************************9999996 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.27
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   YscO-like  13 kkrrveeAEkvvkdkkkaLekEkeklrkleeerdkvkkhkkaKva 57 
                  +++v+eA   ++d  +++e+   +lr+ +  r +  +   +K++
  KHJ30507.1 195 NEQAVQEAATRLADVEREVEHASSQLRNSILSRYHEEQIWSDKIR 239
                 456666666666666666666666666666666655555555555 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.2    0.0013       1.9      73     128 ..     123     178 ..      94     190 .. 0.82
   2 ?    5.8   0.6    0.0094        14      31      61 ..     193     223 ..     182     240 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0013
  Tropomyosin_1  73 tnnealtrkiqlLEeeleesdkkLkettekLretdvkaeelERkvkaLeqerdewe 128
                    +  eal+ +i  LE +l ++++ ++ +    + t +    + R+v+ L +++d w 
     KHJ30507.1 123 SGIEALKNQIASLEKNLQDAQNAVRAARITYKTTVADRASSQREVTTLLARKDSWS 178
                    56799********************9999999998888899999999999999995 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0094
  Tropomyosin_1  31 lekeqeiksLtkknqqleeevekleeklkea 61 
                      +eq +++  +++  +e eve+++++l+++
     KHJ30507.1 193 HTNEQAVQEAATRLADVEREVEHASSQLRNS 223
                    5689999999999999999999999999865 PP

>> ABC_tran_CTD  ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.2    0.0017       2.6      17      41 ..     125     149 ..     123     174 .. 0.52
   2 ?    4.2   0.3     0.035        53      38      60 ..     194     216 ..     187     219 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0017
  ABC_tran_CTD  17 IeaLEeeiaeleaeladpelysdpe 41 
                   IeaL ++ia+le+ l+d++   + +
    KHJ30507.1 125 IEALKNQIASLEKNLQDAQNAVRAA 149
                   5666666666666666654332222 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.035
  ABC_tran_CTD  38 sdpeklaelsaeleeleaeLeel 60 
                   +++++++e+ ++l+++e e e +
    KHJ30507.1 194 TNEQAVQEAATRLADVEREVEHA 216
                   56789***************987 PP

>> DASH_Hsk3  DASH complex subunit Hsk3 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.4     0.001       1.5       6      26 ..     127     147 ..     125     149 .. 0.89
   2 ?    3.4   0.1     0.069     1e+02      16      34 ..     204     222 ..     196     226 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.001
   DASH_Hsk3   6 hLasqLaqLqaNLadteelle 26 
                  L +q+a+L +NL+d ++ ++
  KHJ30507.1 127 ALKNQIASLEKNLQDAQNAVR 147
                 699*************99887 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.069
   DASH_Hsk3  16 aNLadteellevtseQaes 34 
                  +Lad e+++e +s+Q+++
  KHJ30507.1 204 TRLADVEREVEHASSQLRN 222
                 68**************987 PP

>> PsbH  Photosystem II 10 kDa phosphoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.3   0.00017      0.26      22      38 ..     244     260 ..     239     262 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00017
        PsbH  22 WGttpvmavfilLflvf 38 
                 WGt  +m+v ++Lf+vf
  KHJ30507.1 244 WGTWGLMGVNVILFFVF 260
                 ****************9 PP

>> FliJ  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   1.7    0.0016       2.3      61      92 ..     125     156 ..      94     176 .. 0.68
   2 ?    5.9   0.3    0.0096        14       1      39 [.     200     238 ..     194     245 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0016
        FliJ  61 iaqqkqelaqaekqvekareewqearqerkkl 92 
                 i+ +k+++a +ek+++ a+++  +ar+ +k+ 
  KHJ30507.1 125 IEALKNQIASLEKNLQDAQNAVRAARITYKTT 156
                 56666666666666666666666666666654 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0096
        FliJ   1 deaareLaeaqrelqqaeekleeleqyrqeyqkqlsgea 39 
                 +eaa++La ++re++ a ++l +    r + ++ +s++ 
  KHJ30507.1 200 QEAATRLADVEREVEHASSQLRNSILSRYHEEQIWSDKI 238
                 578888888888888888888887777777777777665 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.4    0.0011       1.7      20      68 ..     125     173 ..     123     175 .. 0.96
   2 ?    2.5   0.5      0.13     2e+02      29      64 ..     198     240 ..     187     241 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0011
        ZapB  20 itlLqmeieeLkeeneelkeenreleeeneqlkeereawqerlkkLLgk 68 
                 i++L+++i+ L++  +  ++  r+ +   +   ++r++ q+ + +LL++
  KHJ30507.1 125 IEALKNQIASLEKNLQDAQNAVRAARITYKTTVADRASSQREVTTLLAR 173
                 899********************************************86 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.13
        ZapB  29 eLkeeneelkeenreleeeneqlk.......eereawqerlkk 64 
                 +++e    l++  re+e+  +ql+       +e + w ++++ 
  KHJ30507.1 198 AVQEAATRLADVEREVEHASSQLRnsilsryHEEQIWSDKIRR 240
                 4566678888889999999999999999998888889888875 PP

>> DUF5082  Domain of unknown function (DUF5082)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       3.9   5.9e+03       9      27 ..      99     117 ..      95     120 .. 0.70
   2 ?    9.9   3.8   0.00057      0.85       5     107 ..     125     227 ..     121     240 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 3.9
     DUF5082   9 qaqiaelrseiaaleekIe 27 
                  + ++ l+++i + ++ I 
  KHJ30507.1  99 SQLMDRLQGNIFTASQRIN 117
                 5667777888877777774 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00057
     DUF5082   5 isklqaqiaelrseiaaleekIerLkeaktklsdekeslkqkkkklekplnssesWkGkeennydgirs...nlessyqtyvdkldelidaieeEIerL 100
                 i++l++qia+l++++++ +  ++  + +++   ++ +   ++++++++ l+ ++sW  +  + + + ++     e+++q+  ++l ++++++e   ++L
  KHJ30507.1 125 IEALKNQIASLEKNLQDAQNAVRAARITYK---TTVADRASSQREVTTLLARKDSWSPSDLERFTTLYRmdhTNEQAVQEAATRLADVEREVEHASSQL 220
                 889999999999999999998876665544...4444555688999**********************999778999********************** PP

     DUF5082 101 enqisea 107
                 +n+i + 
  KHJ30507.1 221 RNSILSR 227
                 *999765 PP

>> Sugarporin_N  Maltoporin periplasmic N-terminal extension
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.2    0.0037       5.5      32      49 ..     132     149 ..     123     154 .. 0.84
   2 ?    1.3   1.5      0.23   3.4e+02      36      53 ..     196     213 ..     196     218 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0037
  Sugarporin_N  32 LaaLEkrLqeAeqraqaA 49 
                   +a LEk Lq+A++   aA
    KHJ30507.1 132 IASLEKNLQDAQNAVRAA 149
                   899*********977666 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.23
  Sugarporin_N  36 EkrLqeAeqraqaAeara 53 
                   E+++qeA +r+++ e++ 
    KHJ30507.1 196 EQAVQEAATRLADVEREV 213
                   999********9999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1387  (0.0773607); expected 358.6 (0.02)
Passed bias filter:                      859  (0.0479112); expected 358.6 (0.02)
Passed Vit filter:                        95  (0.00529868); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 3025.60
//
Query:       KHJ30508.1  [L=461]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.3e-68  229.5  24.9    8.2e-67  225.3  16.6    2.8  2  Ytp1            Protein of unknown function (Ytp1)
    1.6e-25   88.9   2.6    1.6e-25   88.9   2.6    2.6  3  DUF2427         Domain of unknown function (DUF2427)
     0.0016   18.6  11.0     0.0016   18.6  11.0    3.7  4  Cytochrom_B561  Eukaryotic cytochrome b561


Domain annotation for each model (and alignments):
>> Ytp1  Protein of unknown function (Ytp1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   1.1   0.00025       1.5     161     198 ..      84     121 ..      68     141 .. 0.79
   2 !  225.3  16.6   1.4e-70   8.2e-67       2     276 ..     157     399 ..     156     400 .. 0.94

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00025
        Ytp1 161 illtGilmsaHaQaselstkiHkqwGllLlaaavaRli 198
                   lt + +++ +Q   +  +iH  +G+lL++  v+ +i
  KHJ30508.1  84 FALTAFFLAHLHQGRVFAKNIHGSFGNLLMLLMVLQII 121
                 35677888888********************9999887 PP

  == domain 2  score: 225.3 bits;  conditional E-value: 1.4e-70
        Ytp1   2 afvqvltgvvvllglgrgeevfnllAHfikGgvFflyG.lltlarylGafaelGwaWnkkpkksksekrivsaefveslliflYGitnvFlEhlagkgg 99 
                 +++q+l+g ++l+g++r+++ +++lAHfi+G++F+ yG l+t+  ++G+f      W  +           s ef++s++i+++G++n+F+Eh++gk+ 
  KHJ30508.1 157 SWTQMLFGGITLMGFCRDDHFGQCLAHFIMGSAFIGYGtLMTMIMLVGQF------WLLRVG--------KSPEFFDSVMIAAWGCVNTFTEHRWGKP- 240
                 79**********************************************94......655533........589**********************999. PP

        Ytp1 100 ewsakdlqHvsiavlfiggGllGlllesklvrkllekaveeaakeaeekakvslnplPalvilltGilmsaHaQaselstkiHkqwGllLlaaavaRli 198
                  w ++d+qH++++v+++ +Gl+G++l++++              + ++k    +n++P++vi+ltG++msaH Q++ lst+iH+ +G++L+aa+++R++
  KHJ30508.1 241 -WVKNDIQHTTMGVVWWSAGLAGIWLSKNR--------------DGSPK----RNFIPGFVIFLTGWAMSAHPQHLPLSTMIHTAFGYTLIAAGLTRIV 320
                 .**************************999..............44556....9********************************************* PP

        Ytp1 199 tylllllkppssvlpsrp.ptellasflLiagglvFmesteetvealeeegldamfllnvtvgltallmawvllllalk 276
                 +++++l++++  +    p  ++++++flL+a+g++Fm +tee++++l+++g++++++++ +++l++ll++++ +ll+++
  KHJ30508.1 321 EIAFILKDKNCIAEDGDPnSFQYIPPFLLYASGFLFMGATEEQMQILSDAGITHVSYVLALYSLAFLLFLFTNILLHFY 399
                 *********887776666258******************************************************9986 PP

>> DUF2427  Domain of unknown function (DUF2427)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.9   2.6   2.6e-29   1.6e-25       8     105 .]      35     129 ..      28     129 .. 0.95
   2 ?   -2.7   0.1      0.87   5.2e+03      52      75 ..     195     217 ..     180     233 .. 0.68
   3 ?   -2.8   0.2       0.9   5.4e+03      55      66 ..     377     388 ..     371     406 .. 0.43

  Alignments for each domain:
  == domain 1  score: 88.9 bits;  conditional E-value: 2.6e-29
     DUF2427   8 fttdephksalwvHiilmtlalvvvyPvalvLslaksrwylpvqivnlvlavlglllghiykgstPelypnniyaklswillillavqvvlavllkla 105
                  +t++p++  l++Hi  m+l++++++P+++vL+l+ksrw++p+q++ +++a+++ +l+h+++g+   + ++ni+++++++l++l+++q++++ +l+++
  KHJ30508.1  35 SMTSDPIDLKLKLHIGFMILSFGIIFPTGIVLGLVKSRWHVPTQVIGTIFALTAFFLAHLHQGRV--F-AKNIHGSFGNLLMLLMVLQIIFGTYLRFH 129
                 5678999*********************************************************9..7.***********************999875 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.87
     DUF2427  52 ivnlvlavlglllghiykgstPel 75 
                 ++ ++++++g + ++  ++s Pe+
  KHJ30508.1 195 TLMTMIMLVGQFWLLRVGKS-PEF 217
                 55667777777766665555.565 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 0.9
     DUF2427  55 lvlavlglllgh 66 
                  vla+ +l++++
  KHJ30508.1 377 YVLALYSLAFLL 388
                 333333333322 PP

>> Cytochrom_B561  Eukaryotic cytochrome b561
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6  11.0   2.7e-07    0.0016      26     129 ..      62     164 ..      45     171 .. 0.81
   2 ?   -2.2   0.0       0.7   4.2e+03     111     124 ..     248     261 ..     221     270 .. 0.59
   3 ?   -0.4   0.2      0.19   1.1e+03      90     122 ..     280     315 ..     275     323 .. 0.60
   4 ?   -0.1   0.8      0.16   9.5e+02      89     124 ..     352     387 ..     346     401 .. 0.62

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 2.7e-07
                     S...-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--SS-SHHHHHHHHHHHHHHHHHHHHHHHHTS..S---HHHHHHHHHHHHHHHHHH CS
  Cytochrom_B561  26 trklskktkkllHlilqllalilavvgllavfksknekeianlyslHswlGlvtvilfllqlvlGfvlfll..pklskklralllplHvllGlvi 118
                     t      +k++ H+  q+++ i+a++++++    + +++ +  +++H+ +G + ++l++lq+++G +l ++  ++++ k+r++++  H ++G ++
      KHJ30508.1  62 TGIVLGLVKSRWHVPTQVIGTIFALTAFFL---AHLHQGRVFAKNIHGSFGNLLMLLMVLQIIFGTYLRFHitKGFHGKIRKVAKIGHGIMGKIM 153
                     555556789999999999999888777655...6777788999**********************9998876699999***999999*******9 PP

                     HHHHHHHHHHH CS
  Cytochrom_B561 119 fvlaivtallG 129
                      v++ +++l G
      KHJ30508.1 154 PVISWTQMLFG 164
                     99999998877 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.7
                     HHHHHHHHHHHHHH CS
  Cytochrom_B561 111 HvllGlvifvlaiv 124
                     H ++G+v +  +++
      KHJ30508.1 248 HTTMGVVWWSAGLA 261
                     66666665555554 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.19
                     HHHHHTS...S---HHHHHHHHHHHHHHHHHHHHHH CS
  Cytochrom_B561  90 Gfvlfll...pklskklralllplHvllGlvifvla 122
                     Gfv+fl     +++ +  +l   +H ++G +    +
      KHJ30508.1 280 GFVIFLTgwaMSAHPQHLPLSTMIHTAFGYTLIAAG 315
                     666665422255555556666666888888766555 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.16
                     HHHHHHTSS---HHHHHHHHHHHHHHHHHHHHHHHH CS
  Cytochrom_B561  89 lGfvlfllpklskklralllplHvllGlvifvlaiv 124
                     +Gf+ + + + ++++ + +  +Hv   l+ + la +
      KHJ30508.1 352 SGFLFMGATEEQMQILSDAGITHVSYVLALYSLAFL 387
                     556555555555666666666666666666666653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       589  (0.0328518); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3624.89
//
Query:       KHJ30509.1  [L=995]
Description: hypothetical protein EV44_g1943 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (995 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1060  (0.0591221); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.73u 0.28s 00:00:01.01 Elapsed: 00:00:00.46
# Mc/sec: 6546.46
//
Query:       KHJ30510.1  [L=315]
Description: putative rrna methyltransferase nop1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.7e-103  344.6   0.0     2e-103  344.4   0.0    1.0  1  Fibrillarin      Fibrillarin
    0.00031   20.5   0.0    0.00045   20.0   0.0    1.2  1  GCD14            tRNA methyltransferase complex GCD14 subunit
     0.0021   17.8   0.1      0.003   17.3   0.1    1.3  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
  ------ inclusion threshold ------
      0.019   14.6   0.0      0.036   13.7   0.0    1.4  1  Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
       0.13   12.4   0.0       0.17   12.0   0.0    1.2  1  FtsJ             FtsJ-like methyltransferase


Domain annotation for each model (and alignments):
>> Fibrillarin  Fibrillarin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  344.4   0.0  5.6e-107    2e-103       1     224 [.      74     309 ..      74     311 .. 0.99

  Alignments for each domain:
  == domain 1  score: 344.4 bits;  conditional E-value: 5.6e-107
                  EEEECSSTTEEEEETTSSEEEEEE-SSTT--SSSSEEEEETTE..............EEEEE-TTTSHHHHHHHTT-S--S--TTSEEEEESTTTSHH CS
  Fibrillarin   1 veeheklegvyivkekgdarlatknlvpgekvYgEklikveee..............EyRvWnpfrsKlaaailkglkelpikkgskvLYlGaasGtt 84 
                  +e+h ++ g++++++k+d+ l+tknl+pge+vYgEk+i+ve++              EyRvWnpfrsKlaa++l gl+e+ ik+g+kvLYlGaasGt+
   KHJ30510.1  74 IEPH-RHPGIFVARGKEDM-LVTKNLSPGESVYGEKRISVENNgpansdgtpsisktEYRVWNPFRSKLAAGVLGGLDEIFIKPGAKVLYLGAASGTS 169
                  5788.9**********999.****************************************************************************** PP

                  HHHHHHHHTTTSEEEEEESSHHHHHHHHHHHTTSTTEEEEES-TTSGGGGTTTS--EEEEEEESSSTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHHS CS
  Fibrillarin  85 vsHvsDivgeegvvyavefsprvlrelievakkRknivPileDArkPekYralvekvDvifaDvaqpdqarilaknaklflkeggyllisikarsidv 182
                  vsHv+Divg++g+v avefs+r++r+li++a++R+n++Pi+eDAr+P +Yr+lv++vDvifaDvaqpdqari+ +na+lflk gg +++s+ka++id+
   KHJ30510.1 170 VSHVADIVGPTGTVIAVEFSHRSGRDLINMATHRTNVIPIIEDARHPLRYRMLVSMVDVIFADVAQPDQARIVGLNAHLFLKVGGGIVVSVKANCIDS 267
                  ************************************************************************************************** PP

                  SSSHHHHHHHHHHHHHHTTEEEEEEEE-TTTSTTEEEEEEEE CS
  Fibrillarin 183 tkepeevfkeeveklkeeglkvleqvklepyekdhalvvgky 224
                  t+ pe+vf++ev+kl+ee++k+leq++lep+e+dh++vvg+y
   KHJ30510.1 268 TAAPEAVFAREVQKLREERIKPLEQLTLEPFERDHCIVVGRY 309
                  ****************************************98 PP

>> GCD14  tRNA methyltransferase complex GCD14 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   1.3e-07   0.00045      37     150 ..     152     266 ..     148     296 .. 0.73

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 1.3e-07
       GCD14  37 elkpGsvvvesGtGsgslshaiartvaPtGhlftfefheqraekareefrehelsqlvtvthrDvckeGfdeevsgkvDavfLDlPaPwea.iphaaka 134
                  +kpG++v+  G+ sg+  + +a  v+PtG + ++ef + r  + + ++  h+ +  v     D+ +    + + + vD +f D+ +P++a i  + ++
  KHJ30510.1 152 FIKPGAKVLYLGAASGTSVSHVADIVGPTGTVIAVEFSH-RSGRDLINMATHRTN--VIPIIEDARHPLRYRMLVSMVDVIFADVAQPDQArIVGLNAH 247
                 589************98777899**************64.666666666666643..3333456554333466779*************9965555555 PP

       GCD14 135 l..kkeggrlCsf.sPCie 150
                 l  k  gg + s  + Ci+
  KHJ30510.1 248 LflKVGGGIVVSVkANCID 266
                 4447778877776246776 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.1   8.3e-07     0.003      69     108 ..     151     190 ..     138     266 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 8.3e-07
                 TT--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBH CS
        PCMT  69 lelkkgarvLevGsGsGyltavlarlvgekgrvvsierik 108
                 + +k+ga+vL +G+ sG     +a +vg++g+v+++e ++
  KHJ30510.1 151 IFIKPGAKVLYLGAASGTSVSHVADIVGPTGTVIAVEFSH 190
                 459**********************************875 PP

>> Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0     1e-05     0.036       9      74 ..     156     219 ..     151     240 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1e-05
                      T-EEEESS-TTSHHHHHHHHHTTTTSEEEEEESSCCC.HHHHHHHHHHTT--SEEEEES-CTCCHHH CS
  Methyltr_RsmB-F   9 eetilDlcaaPGgKTthiaelmknkgtvvAvdankeR.lkrvaenlkrLgvtntivleaDarkidkv 74 
                      + ++l l aa G   +h+a+++ ++gtv+Av+ +++   + ++  ++r +v     +  Dar++ ++
       KHJ30510.1 156 GAKVLYLGAASGTSVSHVADIVGPTGTVIAVEFSHRSgRDLINMATHRTNVI---PIIEDARHPLRY 219
                      5678999*************************87654145566677776655...455677776554 PP

>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   4.8e-05      0.17      15      97 ..     150     235 ..     136     273 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.8e-05
                 HHT-S-TT-EEEECT-TTSHHHHHHCCT.T.-SEEEEEESSSS.........HHH.TTEEEECS-CCCSSHHHHHCHCHHHSSEEEEEE--S- CS
        FtsJ  15 kfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.........apl.pgvttiqgditdpetiekikealserkvdlvvsDgap 97 
                 +   +kpg +v+ lgaa G     ++  +g++g v+av   +          + +  +v  i  d ++p   +++        vd++ +D+a 
  KHJ30510.1 150 EIF-IKPGAKVLYLGAASGTSVSHVADIVGPTGTVIAVEFSHRsgrdlinmaT-HrTNVIPIIEDARHPLRYRMLVS-----MVDVIFADVAQ 235
                 443.69*************9999999**9999999999998886776655433.24777777999999988887774.....59******993 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       344  (0.0191868); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2228.16
//
Query:       KHJ30511.1  [L=242]
Description: hypothetical protein EV44_g0364 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1820.48
//
Query:       KHJ30512.1  [L=176]
Description: hypothetical protein EV44_g0597 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       494  (0.0275531); expected 358.6 (0.02)
Passed bias filter:                      243  (0.0135535); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.29s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1242.77
//
Query:       KHJ30513.1  [L=514]
Description: putative v-type proton atpase subunit b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-65  220.7   0.0    2.4e-65  220.1   0.0    1.2  1  ATP-synt_ab    ATP synthase alpha/beta family, nucleotide-bin
    5.1e-14   52.5   0.5      1e-13   51.5   0.5    1.6  1  ATP-synt_ab_N  ATP synthase alpha/beta family, beta-barrel do


Domain annotation for each model (and alignments):
>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.1   0.0   2.7e-69   2.4e-65       1     213 []     144     374 ..     144     374 .. 0.98

  Alignments for each domain:
  == domain 1  score: 220.1 bits;  conditional E-value: 2.7e-69
                  SSHHHHHHS-EBTT-EEEEEESTTSSHHHHHHHHHHHSSTS................S.EEEEEEESEEHHHHHHHHHHCHHSSGGGGEEEEEEETTS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................x.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab   1 GirvlDalfpivqGqrtlipgafgvGktvisqslskqsnsd................d.aiiyvgiGergnevaevleefpegtimkrtvlvantsne 81 
                  Gi+++D++ +i++Gq++ i++a+g+++++i++++++q+                   +  i+++++G + ++++ + ++f+e++ ++r++l++n +n+
   KHJ30513.1 144 GISAIDTMNSIARGQKIPIFSASGLPHNEIAAQICRQAGLVqkqgvtnkgthdghedNfSIVFAAMGVNLETARFFTRDFEENGSLERVTLFLNLAND 241
                  89***********************************8655789************8689************************************** PP

                  -HHHHHHHHHHHHHHHHHHHH.TTSEEEEEEETHHHHHHHHHHHHHHTTTSBEGGGSBTTHHHHHHHHHTTSEEETSSEEEEEEEEEEE-GGCSTTSH CS
                  xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  82 pvaareasiytgitlAEyfrd.qgknvlliadslsrwaeAlreislrlgempadqgypaylgaklaslyERagkapdrtGsvtivaavspaggDfsdp 178
                  p+++r++++++++t+AE++++  +k+vl+i+++l+ +++Alre+s++ +e+p+++gyp+y++++l+++yERag+++ r+Gs+t++++++++++D+++p
   KHJ30513.1 242 PTIERIITPRLALTTAEFYAYqLEKHVLVILTDLTAYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVQGRNGSITQIPILTMPNEDITHP 339
                  ********************9679************************************************************************** PP

                  HHHHHHHHSSEEEEB-HHHHHTTBSSSBCTTTEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab 179 vttatlgitdgfivLdkklaqrkhfPainvlvSvS 213
                  +++ t +it+g+i++d++l +r+++P+invl S+S
   KHJ30513.1 340 IPDLTGYITEGQIFIDRQLDNRGIYPPINVLPSLS 374
                  *********************************98 PP

>> ATP-synt_ab_N  ATP synthase alpha/beta family, beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.5   0.5   1.2e-17     1e-13       4      69 .]      24      87 ..      21      87 .. 0.95

  Alignments for each domain:
  == domain 1  score: 51.5 bits;  conditional E-value: 1.2e-17
                   EETTEEEEESSTSCETCTTEEEEECCETCSTEEEEEEEEEETTEEEEEESS-STTBBT.TSEEEEES CS
  ATP-synt_ab_N  4 viGpvvdvefgigrlpgiynalevelvefgtlllgvalnlgedkVrvivmgstdGlsr.GteVkrTG 69
                   v+Gp+v+ e+++   p ++++++  l++ gt + g++l+ ++d+++v+v+++t+G+++  t+V +TG
     KHJ30513.1 24 VNGPLVILENVKF--PRYNEIVSLTLPD-GTERSGQVLEARGDRAVVQVFEGTSGIDVkKTKVNFTG 87
                   99***********..888888888888*.*************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       647  (0.0360868); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3667.13
//
Query:       KHJ30514.1  [L=363]
Description: putative peroxisomal membrane anchor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-28   98.6   3.0    5.5e-28   98.6   3.0    2.5  3  Pex14_N   Peroxisomal membrane anchor protein (Pex14p) conser


Domain annotation for each model (and alignments):
>> Pex14_N  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   2.6      0.19   3.5e+03      70      87 ..      13      30 ..       2      40 .. 0.28
   2 !   98.6   3.0   3.1e-32   5.5e-28       3     157 .]      39     167 ..      37     167 .. 0.77
   3 ?   -2.2   0.1      0.32   5.8e+03      71      82 ..     234     245 ..     209     259 .. 0.55

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.19
     Pex14_N 70 sasssatpqpqaasqtsq 87
                + s+++t++p++a++ +q
  KHJ30514.1 13 KISQNSTSSPSSATTDEQ 30
                122222222222222211 PP

  == domain 2  score: 98.6 bits;  conditional E-value: 3.1e-32
     Pex14_N   3 dlveqAvkFLqdpsVrsaplekkvaFLesKGLtqeEIeeaLkraereeeasesavaassaseqaqeesasssatpqpqaasqtsqsspspsppaqqqqq 101
                 +++eqA++FLq +++++  +ekk aFL++KGL+++EIee+++ +e+++++++             + s+ +++++++qa +++            +++q
  KHJ30514.1  39 KVIEQAREFLQKDEIQDIEKEKKAAFLQTKGLSNDEIEELIGGTEKTDSKAK-------------NLSSPKTSERESQAVKTK------------TAPQ 112
                 78*****************************************443332221.............112222222222222111............1112 PP

     Pex14_N 102 qyrpPivtypefltkppkppppPlrtwrdllitatalaglgaglyglskryiaPmi 157
                 ++  Pivtypefl++pp  +p Pl t+++l++t++ ++ l+a+lyg+ +++++P++
  KHJ30514.1 113 TTPIPIVTYPEFLVNPPL-KPSPLLTTSHLINTLYSASFLTATLYGTLEYIVTPKL 167
                 2236**********9888.9**********************************85 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.32
     Pex14_N  71 asssatpqpqaa 82 
                 +s+ ++pqp+++
  KHJ30514.1 234 TSPPRSPQPKNS 245
                 222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1223  (0.0682135); expected 358.6 (0.02)
Passed bias filter:                      588  (0.032796); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 2560.66
//
Query:       KHJ30515.1  [L=485]
Description: putative aspartate tyrosine aromatic aminotransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.5e-34  117.7   0.0    1.1e-33  116.9   0.0    1.4  2  Aminotran_1_2   Aminotransferase class I and II
  ------ inclusion threshold ------
      0.067   12.7   0.0       0.28   10.7   0.0    1.9  1  Sua5_yciO_yrdC  Telomere recombination


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0      0.43   3.8e+03     256     291 ..      18      53 ..       9      73 .. 0.64
   2 !  116.9   0.0   1.2e-37   1.1e-33      34     348 ..     115     447 ..      76     461 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.43
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Aminotran_1_2 256 lqaavaaalsdallkqseleemrqrlqkrrkelrde 291
                     ++av++a++ +   + +++e+ ++++k+ +  +++
     KHJ30515.1  18 RPRAVSNATRRFSSDEPSFNENDSKIHKQFRNAHEG 53 
                    456666666666666667777777777766666555 PP

  == domain 2  score: 116.9 bits;  conditional E-value: 1.2e-37
                    HTSTTST-BTTHHHHHHHHHHHHHC...TCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEEESS-THHHHHHHHTT.SEEEEEEBEET CS
  Aminotran_1_2  34 ggtlneygpidglpeleealakflg...rseklklkreaavvvgsGagaliealifllklnpgdeilvpdptyasyknilrlsg.gevvryplyse 125
                    +    eygp+ g + l+ a+a +++   r+ k +l    +v+  +G  a++  ++++l +n+   +++pd  y+ y+++l l + ++ ++ pl++ 
     KHJ30515.1 115 TMAGREYGPTAGIKNLRAAVANLYNvhhRQGKESLYSWENVCIVPGGRAGLIRIAAVL-NNAYLGFFIPD--YTAYNEMLSLFKnFAAIPSPLQED 207
                    555679*******************99966666666666*******************.89999999887..6788888887541669999999** PP

                    TTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTTTCBSSSS.HTHHH.....HGGSTTSTT..E CS
  Aminotran_1_2 126 edfhldlealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsl.davat.....ranveeepn..l 213
                    +d+h+  +++ e +++       + vil+ +p NPtG+v + +el ++ dl++  +  l+ De Y+g  ++s  d +++     +++v+      +
     KHJ30515.1 208 DDYHIHPDKIAEEIAR------GVSVILTSNPRNPTGKVVKNPELAEIQDLCRG-RTTLIMDEFYGGYNYTSDcDGTTIsaadnVVDVD---VddV 293
                    ***************9......889****************************7.999************9766433336644444444...2457 PP

                    EEEEESSSTTSSGGG-EEEEEEEHHHHHHHHHHHHHHTS..SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTE.EEECCSCSS CS
  Aminotran_1_2 214 livgslsKafGlaGeRvGyilgnaavvsqlrklsrpfls..ssllqaavaaalsdallkqseleemrqrlqkrrkelrdeLaelgl.kvlasqsgm 306
                    li  +l K f l+G+R+++i+g +++++++ +  + +      + q+a+  +l+ ++ + +e+++ + ++ ++r+++ d+L++ g+ +  +++s++
     KHJ30515.1 294 LIIDGLTKRFRLPGWRIAWIIGPKDFIKAIGSCGSYLDGgaNVPFQEAAISMLEPTK-VLNEMKAIQHHFREKRDYVIDRLRSMGFvINSIPDSTF 388
                    *****************************99999988889999************98.567***********************661556777*** PP

                    EEEEEETHH.....CHHHHHHHHHHTCTEEEEEGGGGTS.............TTEEEEEC CS
  Aminotran_1_2 307 flltdlsae.....takelskkLleevgvyvtpgtsftv.............pgrlRitv 348
                    +l+ dl+ +     +   +++++lee  v+v+pg  f +               ++R+++
     KHJ30515.1 389 YLWLDLTGLpeainDGLNFFQACLEE-RVIVVPGIFFDLnpskrrdlfdspcHHFVRFSY 447
                    **************9***********.******999988866666666665555666666 PP

>> Sua5_yciO_yrdC  Telomere recombination
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   3.1e-05      0.28      96     157 ..     173     234 ..     155     242 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 3.1e-05
                     TTTEEEEEE-SSHHHHHHHHHCTS-EEEEES-STTS-S-SSHHHHHHHC-TTSECB-SS--- CS
  Sua5_yciO_yrdC  96 glktvGvrlPdtplarlLlealgeplvaTSanlsgepsitdaeeveeelgeivdlildggei 157
                     ++  +G+++Pd    +++l+ +++  +++S   +++++ +++++++ee+++ v++il  ++ 
      KHJ30515.1 173 NNAYLGFFIPDYTAYNEMLSLFKNFAAIPSPLQEDDDYHIHPDKIAEEIARGVSVILTSNPR 234
                     67899****************************************************99943 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 3274.88
//
Query:       KHJ30516.1  [L=280]
Description: putative phosphoglycerate mutase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-28   99.6   0.0    3.1e-28   98.8   0.0    1.4  1  His_Phos_1  Histidine phosphatase superfamily (branch 1)


Domain annotation for each model (and alignments):
>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.8   0.0   1.7e-32   3.1e-28       1     186 [.       7     213 ..       7     220 .. 0.88

  Alignments for each domain:
  == domain 1  score: 98.8 bits;  conditional E-value: 1.7e-32
                 EEEEE---BTTB--.......TT----B-HHHHHHHHHHHHHHTT..S---EE..EE-SSHHHHHHHHHHHHCTT.............--EEE-GGGS- CS
  His_Phos_1   1 lyLvRHGetewnaegr...lqgrtdvpLteeGreqAealaerlag..epidai..ysSplkRarqTaeliaealg.............lpveldegLrE 79 
                 ++L+RHG++e n+++        + vpLt eG  qA+ +++rl+g   p d++  + Sp++R+r+T e i+ +l              ++v ++++LrE
  KHJ30516.1   7 IILIRHGQSEGNKNREihqAVPDHKVPLTSEGWNQARDAGRRLRGllKPSDRLhfFISPYRRTRETTEGILSTLTgddpspspfprnsIKVFEEPRLRE 105
                 79*********9998863334467899******************9777777799******************9999********************** PP

                 ---GGGTT-B.HHHHHH..HSHHHHHHHHH-GGG-BS-BHHHHHHHHHHHHHHHHHHTTTSE....EEEEE-HHHHHHHHHHHHT--GGGGGGB--.-T CS
  His_Phos_1  80 idfGdweglttaeiaeeypeeleawlrdpadvrppggEsledvaaRvaaaleelaarheget....vlvVsHggvirallarllglpleelrrlel.dn 173
                  dfG+++   +ae+++    + e+ + +   +r+p+gEs +d ++Rv+ + e l ++ ++e+     ++V+Hg + r++l+++ ++++e +++l+  ++
  KHJ30516.1 106 QDFGNFQPC-SAEVERI---WQERAEYGHFFYRIPNGESAADAYDRVSGFNESLWRQFGDEDfasvCVLVTHGLMSRIFLMKWYHFSVEYFEDLRNvNH 200
                 *******88.8888887...666666666668999******************************99*************************9988688 PP

                 T-EEEEEE-SS-E CS
  His_Phos_1 174 aslsvlefdeggw 186
                 ++  +++  e++ 
  KHJ30516.1 201 CEFLIMRRGENNG 213
                 8888777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2139.63
//
Query:       KHJ30517.1  [L=343]
Description: putative ubiquitin thioesterase otubain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-65  220.0   0.0      4e-65  219.7   0.0    1.0  1  Peptidase_C65  Peptidase C65 Otubain


Domain annotation for each model (and alignments):
>> Peptidase_C65  Peptidase C65 Otubain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.7   0.0   2.2e-69     4e-65       6     246 .]      47     295 ..      44     295 .. 0.98

  Alignments for each domain:
  == domain 1  score: 219.7 bits;  conditional E-value: 2.2e-69
                    SXSB---EETHHHHTTTTT.THHHHHHHHHHHTTEEEEE-B--SSTHHHHHHHHHHHHHHHH-HH..HHHHHHHHHHHHHHHHH.HTT--HHHHHH CS
  Peptidase_C65   6 kplvsekkplsaLakeyek.naailkkikllsekYssiRrvrgDGnCfyRaflfsylellleskdkaevsrikerveklkeale.slgfdeevved 99 
                     plv++k ++ a+++ey+k ++++++k+ +ls+ Ys++R++ gDGnC++Ra++f+y+e+ l+ ++ka+++++++r+ +l++ l  s gf+++++ed
     KHJ30517.1  47 GPLVGQKISSHAITEEYAKaDPIYVQKTVALSKVYSHYRQILGDGNCGWRAIGFAYFESFLRLQSKARLEEEMARISSLNNLLItSGGFKQWLFED 142
                    69*******************************************************************************9988*********** PP

                    HHHHHHHHHHHHHTTSS-HH.....HHHHHHTSHHHHHHHHHHHHHHHHHHHHHTHHHHGGGS-TT--HHHHHHHHTSSTT--B-HHHHHHHHHHT CS
  Peptidase_C65 100 fleaflellkkiekkteeseeka.eellkafneqeesdyivvflRlltsaelkthadeyepFldelstveeFceqevepvnkEaDnvqitaLaeal 194
                    ++ +++ ll+++++  + + ++a   l+++fn+   s++i+++lRll+s++lk++ + ye+F+ ++s v+++ ++ +epvn E++++ +  L+++l
     KHJ30517.1 143 MVAETVGLLRDLAERVQVDPQEAeCILMERFNNAIVSNSIIYHLRLLASSWLKANPEMYEGFILDGSGVDAYSHNYIEPVNVEIEHLIMCVLIDVL 238
                    ******************9998889999******************************************************************** PP

                    ....T--EEEEESSSSGBSTTSEEEEES-S......SS-S--SEEEEEETBEEEEEEE CS
  Peptidase_C65 195 ....gvkvrVeyldrsvegesvnahafpeeaq..kseeeqapeitLlYrpgHYDiLyk 246
                        g++v+++yldr+ +g++ n+h f+ee+     +++  p i+Ll+rp HYDiLy+
     KHJ30517.1 239 lkpiGIAVEIVYLDRT-PGSHANTHIFQEEDPvgIPKNPGGPIIHLLFRPSHYDILYR 295
                    ****************.***********99989999999*****************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       258  (0.0143901); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2480.86
//
Query:       KHJ30518.1  [L=356]
Description: putative lipoyl ligase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.5e-05   23.4   0.0    0.00011   22.1   0.0    1.6  1  BPL_LplA_LipB  Biotin/lipoate A/B protein ligase family


Domain annotation for each model (and alignments):
>> BPL_LplA_LipB  Biotin/lipoate A/B protein ligase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0     6e-09   0.00011      19     131 .]      40     148 ..      36     148 .. 0.82

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 6e-09
                    GG--TT-EEEEEEESS-B-B--B-TTSEEEEEEE.EESS...-CCGTHHHHHHHHHHHHHHH.........HHTT-TTEEEETTTEEEETTEEEEE CS
  BPL_LplA_LipB  19 selesgglvvvrrqtgGrnvwhspkgeltyslll.speqktfqnrvlelyvsllvlavlealg...yrdskpgiegipvfikwpnDlyvngrKlaG 110
                    +  e  ++ ++++ +gG+ ++h+p++ l+  +++ +   +   + ++++yv+ll+  ++ +l    + + +++ +g++           ++ K+a+
     KHJ30518.1  40 KASEPHRALLFETKRGGQTTFHGPGQLLIWPIIDiKNPWPVCGPLDVRRYVHLLEECTMITLRnigCESIRTKHPGVWDT--------TGQSKIAA 127
                    5566677778999*************888888761556678899******999998888888543333367888888888........8******* PP

                    EEEEEEETTS-EEEEEEEEEE CS
  BPL_LplA_LipB 111 iavtstrgktlhhivigvgvn 131
                     +v+ +r+  +++++++++++
     KHJ30518.1 128 LGVHLRRNISSYGVACNLNTD 148
                    ******************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       215  (0.0119917); expected 358.6 (0.02)
Passed bias filter:                      203  (0.0113224); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2765.56
//
Query:       KHJ30519.1  [L=170]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       269  (0.0150036); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1260.23
//
Query:       KHJ30520.1  [L=1162]
Description: putative dna repair protein rad18 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.1e-26   92.7   0.0    3.5e-26   92.0   0.0    1.4  1  SMC_N          RecF/RecN/SMC N terminal domain
    7.3e-18   65.8   0.8    7.3e-18   65.8   0.8    6.0  4  AAA_23         AAA domain
    6.2e-10   39.3   0.0    6.2e-10   39.3   0.0    3.4  4  AAA_15         AAA ATPase domain
     0.0024   17.7   6.4      0.015   15.2   0.4    3.4  4  AAA_21         AAA domain, putative AbiEii toxin, Type IV TA 
     0.0038   17.0   0.1      0.008   15.9   0.1    1.6  1  AAA_29         P-loop containing region of AAA domain
  ------ inclusion threshold ------
      0.016   13.7   0.6      0.027   12.9   0.6    1.3  1  Glyco_hydro_1  Glycosyl hydrolase family 1
      0.023   15.0   0.6      0.096   13.0   0.0    2.5  3  SMC_hinge      SMC proteins Flexible Hinge Domain
      0.027   14.7   0.0       0.09   13.0   0.0    1.8  1  SbcCD_C        Putative exonuclease SbcCD, C subunit


Domain annotation for each model (and alignments):
>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.0   0.0   1.6e-29   3.5e-26       5     198 ..     116    1126 ..     112    1143 .. 0.96

  Alignments for each domain:
  == domain 1  score: 92.0 bits;  conditional E-value: 1.6e-29
                  EEEESETTEECEEEEEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEE...SSSSSSCEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxx RF
       SMC_N    5 leienFksyagktvilpfsksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkk...lkiekeevs 98  
                  ++  nF     ++  +++ + ++++vG NGSGKs +l Ai  +LG +++++ r ++l++li+  ++++    a + + ++ne+++    +i  +++ 
  KHJ30520.1  116 ITCINFMCH--SRLHVKLGPLINFVVGMNGSGKSAVLTAITLCLGGKASNTNRGSNLKSLIKG-NQEK----AILVVKIKNEGNDayyPEIYGPSII 205 
                  555566655..688899999******************************************8.4444....44444455666664456778899** PP

                  EEEEEETTSEEEEEETTEE.....E-HHHHHHHHHCTT-STT....................................................... CS
                  xxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxx....................................................... RF
       SMC_N   99 isrrvkrkgeseykingke.....vtkkevsellesagiske....................................................... 135 
                  ++r+ +r+g s++k++ ++      +k++v++++e  +++ +                                                       
  KHJ30520.1  206 VERHFSRSGGSQFKLKSSRgiivsTKKADVEDIVEFYQLQVDnpmniltqdkaksflhqstpaekykffaegvqlealnndyslifdtcdaieakle 302 
                  ***************98753332256799**********9999****************************************************** PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30520.1  303 eskddiaelereasvarekaeaarqhdgmrktasilskkyawaqvvdqenilaekeravleiqqriedderlvanhdrsfqkaeellnrskeslqil 399 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30520.1  400 tdeagpireaeetarsayeaasldvkkaiaekakikaelaeakedirkrvkeieaeqkliaeanggsharkqaeidradeklketisshrksveglp 496 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30520.1  497 lidqkydeakinlnrvetlseakkveiqkvrsllhelnsgrrdpmagydvkmprllnqirqdrefkntpvgplglhiklkdatwgdiletqlgvqln 593 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30520.1  594 gfivtntsdqrrmsnylksynmanfcpvmimgenqiidttenepdpqyltvlrvldidnelvrqhliinqaieqtllikhredalkvlfdgtrpknt 690 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30520.1  691 rqayslhdnqrrhgiyfgftgrgssftsgikpprgqprmqtdteskisfyketlrllehelkicerdifdarssvqsclkevsqrrieierlkvatq 787 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30520.1  788 raetllenlraqledlnpedgrldvlkkcledeedkvrlygesygnqalelerlqqnalelcqnhkthlvsmkdheaktnklegkirntdqarhtal 884 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30520.1  885 reknsaivvlerrqheksvlkrkrdaavtrvaefmegaskvcprvplepgetteslekqldrikqilsahrkrqgasdqeifdvatkkqelyiqake 981 
                  ************************************************************************************************* PP

                  ...............................................................................CS-HHHHHHHHHHHHHHH CS
                  ...............................................................................xxxxxxxxxxxxxxxxxx RF
       SMC_N  136 ...............................................................................lLSgGektLvalaLlfAi 153 
                                                                                                 +LSgGek+ +++ Ll+A+
  KHJ30520.1  982 srsglekllrllkqacliriqmfrrfqasisarsrinfqyllserdfrgslnidhkrkkldvhvepdkavvtgkgrqtkTLSGGEKSFSSICLLLAL 1078
                  ************************************************************************************************* PP

                  HCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTT...SEEEEE-SS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxx RF
       SMC_N  154 qkvkpaplyllDeidaaLDeknvkkvaellkekskn...aQfivislr 198 
                   ++  apl +lDe+d  +D+ n+    +++ ++  +    Qfi i+ +
  KHJ30520.1 1079 WEAMGAPLRCLDEFDVFMDDVNRDVSTKMIISAARKavgRQFILITPK 1126
                  ****************************998665553457****9966 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   4.2       7.6   1.7e+04     103     175 ..      29      57 ..       4      98 .. 0.45
   2 !   65.8   0.8   3.3e-21   7.3e-18       2     190 ..     116     313 ..     115     369 .. 0.61
   3 ?  -10.3  23.5         8   1.8e+04     104     176 ..     368     469 ..     339     538 .. 0.57
   4 ?  -14.3  22.9         8   1.8e+04     184     198 ..     792     806 ..     633     998 .. 0.55

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 7.6
      AAA_23 103 ttkkaklelleideleqfisellgskkiilnlilflgqerfeefelkdkkerleelekeleeled.ekkllekl 175
                 +                                             k+k +rl + +++++ l   e+++ e+ 
  KHJ30520.1  29 R---------------------------------------------KRKHQRLSNKQQQQDSLVSdEESEHEAS 57 
                 1.............................................2222233333333333221022222222 PP

  == domain 2  score: 65.8 bits;  conditional E-value: 3.3e-21
      AAA_23   2 LkienfrsfrdqeidFskgltlItGpNGaGKTTildAiklaLygetprlsrksgrgfeksdveiesegkvkay..veltfenkdgry......trsier 92 
                 ++  nf+++++ ++ +++ ++ ++G+NG+GK+++l Ai+l+L+g++++++r+   ++ ks ++   +++ ka+  v+++ e +d           si  
  KHJ30520.1 116 ITCINFMCHSRLHVKLGPLINFVVGMNGSGKSAVLTAITLCLGGKASNTNRG---SNLKSLIK---GNQEKAIlvVKIKNEGND--AyypeiyGPSIIV 206
                 7889****************************************99887774...44666666...446666622555554444..4469999888889 PP

      AAA_23  93 erelskkkgkttkkaklelleideleqfise.....llgskkiilnlilflgqerfeefelkdkke.........rleelekeleeledekkllekleq 177
                 er+ s++ g++ k +  +++ +++++  +++     +l++    +++ ++ +++ +  + ++++ e         +le+l++++  + d+ + +e+++ 
  KHJ30520.1 207 ERHFSRSGGSQFKLKSSRGIIVSTKKADVEDivefyQLQV---DNPMNILTQDKAKSFLHQSTPAEkykffaegvQLEALNNDYSLIFDTCDAIEAKL- 301
                 9999999999999999999999999999998444442222...2222222222222112222222233355555544444444444444444444442. PP

      AAA_23 178 ekekekeleelee 190
                  +e ++ + ele+
  KHJ30520.1 302 -EESKDDIAELER 313
                 .112222222222 PP

  == domain 3  score: -10.3 bits;  conditional E-value: 8
      AAA_23 104 tkkaklelleideleqfisellgskkiilnlilflgqer....................feefelkdkkerleelekeleeledekkllekl....... 175
                 + ++++   ++d + q+ +ell+++k++l+++    ++                     ++  e+++ k +l+e+++++++  +e++  +kl       
  KHJ30520.1 368 IEDDERLVANHDRSFQKAEELLNRSKESLQILTD-EAGPireaeetarsayeaasldvkKAIAEKAKIKAELAEAKEDIRKRVKEIEAEQKLiaeangg 465
                 2333444445588888888888888887766542.2222333333333333333333321111122222233333333333333333333333333555 PP

      AAA_23 176 ...e 176
                     
  KHJ30520.1 466 shaR 469
                 5443 PP

  == domain 4  score: -14.3 bits;  conditional E-value: 8
      AAA_23 184 eleeleeeleeilke 198
                  le+l+ +le++++e
  KHJ30520.1 792 LLENLRAQLEDLNPE 806
                 333333333333332 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   2.6       4.3   9.7e+03     204     237 ..       6      51 ..       2      97 .. 0.45
   2 !   39.3   0.0   2.8e-13   6.2e-10       4     262 ..     114     496 ..     112     536 .. 0.63
   3 ?   -0.9   0.1      0.47     1e+03     118     261 ..     600     745 ..     578     836 .. 0.55
   4 ?   -0.7   1.4       0.4     9e+02     130     262 ..     809     964 ..     676     993 .. 0.44

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 4.3
      AAA_15 204 Rnvsdedsekkssllgklkekileealqekl............eee 237
                 R+++++++e++s+ l++ +e+  ++ + ++l            +ee
  KHJ30520.1   6 RQSNNDEDEETSPELSENQENGGRKRKHQRLsnkqqqqdslvsDEE 51 
                 5555555555555555555554443333333221112222222222 PP

  == domain 2  score: 39.3 bits;  conditional E-value: 2.8e-13
      AAA_15   4 kkikikNFRslkdveidlseeltvliGkNnsGKSsilealdlFlnnkekkn.................kkvikiekedleifeniseskdikIdvef.. 83 
                  +i+  NF +++  +++l + +++++G N+sGKS +l a+ l l  k +                     v+ki++e  + +  +    +i ++ +f  
  KHJ30520.1 114 LEITCINFMCHSRLHVKLGPLINFVVGMNGSGKSAVLTAITLCLGGKASNTnrgsnlkslikgnqekaILVVKIKNEGNDAYYPEIYGPSIIVERHFsr 212
                 578888***************************************9944446999999*******9884556777777777777777778888888888 PP

      AAA_15  84 ................................................................................................... 83 
                                                                                                                    
  KHJ30520.1 213 sggsqfklkssrgiivstkkadvedivefyqlqvdnpmniltqdkaksflhqstpaekykffaegvqlealnndyslifdtcdaieakleeskddiael 311
                 888877777777777777777777777777777777777777778888888888888888888888888888888888888888888887777776666 PP

      AAA_15  84 ..aekekakeyektlkskekkkadlllkkkesdlkktikdkklklkknelsdekisvekkks....kkelpkekeeklekekeelkidkedlkklikkl 176
                   +++  +++ e + + ++ +k+  +l kk+   +   ++++l+ k+  +      +e+++         + + ee l+ +ke+l+i  +++  + +  
  KHJ30520.1 312 erEASVAREKAEAARQHDGMRKTASILSKKYAWAQVVDQENILAEKERAVLEIQQRIEDDERlvanHDRSFQKAEELLNRSKESLQILTDEAGPIREAE 410
                 542223333334444445555555555555555555555555555555554443333333335544444455666778888888888888888888888 PP

      AAA_15 177 eeslkkee.....elknvlksaiiklllisakRnvsdedsekkssllgklkekileealqekl....eeelteklkeiqeklkeidkklaeelk..k 262
                 e+  + +e     +            + i +k +++ e+ e k+++  ++ke   e++l  ++    + +++ ++++ +eklke+++   ++ +   
  KHJ30520.1 411 ETARSAYEaasldV-----------KKAIAEKAKIKAELAEAKEDIRKRVKEIEAEQKLIAEAnggsHARKQAEIDRADEKLKETISSHRKSVEglP 496
                 88888887444443...........333333333333333333333333333333322221113333344444445555555544444433333442 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.47
      AAA_15 118 tikdkklklkknelsdekisvekkkskkelpkekeeklekekeelkidkedlkklikkleeslkkeeelknvlksaiiklllisakRnvsdedsekkss 216
                 t+ ++ + ++ + ++  +++  +++ ++++ + +e++ + +++ + +      ++++  +e + ++     ++++ai+++lli+ + ++ + + + +++
  KHJ30520.1 600 TSDQRRMSNYLKSYNMANFCPVMIMGENQIIDTTENEPD-PQYLTVL------RVLDIDNELVRQHL----IINQAIEQTLLIKHREDALKVLFDGTRP 687
                 555555555555555555555555555555544333332.1111111......11121222333444....6677777777777777777777777777 PP

      AAA_15 217 llgklkekileealqekl......................eeelteklkeiqeklkeidkklaeelk 261
                   +++ +++ ++  q +                               +++q++ + +++ ++e l 
  KHJ30520.1 688 KNTRQAYSLHDN--QRRHgiyfgftgrgssftsgikpprgQ-------PRMQTDTESKISFYKETLR 745
                 777777777664..333345667777777776643333332.......3333333333333333333 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.4
      AAA_15 130 elsdekisvekkkskkelpkekeeklekekeelkidkedlkklikkleeslkkeeelknvlksaiikllli..sakRnvsd.....edsekkssllgkl 221
                 +l++ k+++e++++k+ l+ e++ ++ +e e l+ +  +l    k+   s+k +e + n+l+ +i+ ++     a R+ ++     e+ ++++s+l ++
  KHJ30520.1 809 RLDVLKKCLEDEEDKVRLYGESYGNQALELERLQQNALELCQNHKTHLVSMKDHEAKTNKLEGKIRNTDQArhTALREKNSaivvlERRQHEKSVLKRK 907
                 344455555555555555555555554444444444444444444333334444433333333333332210012222222233344444444444444 PP

      AAA_15 222 kekileealqekl...........eeelteklkeiqeklkeidkklaeelk.......k 262
                  +  +   ++  +            +e  e  +++++ l+ i+++l+++ k       +
  KHJ30520.1 908 RDAAVTRVAE--FmegaskvcprvPLEPGETTESLEKQLDRIKQILSAHRKrqgasdqE 964
                 4444444332..13466666666644444444444555555555554444444444433 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.4   6.5e-06     0.015       1      41 [.     135     166 ..     135     234 .. 0.76
   2 ?   -1.5   0.2      0.77   1.7e+03     115     196 ..     342     423 ..     290     456 .. 0.77
   3 ?   -2.4   0.0       1.5   3.3e+03      68     113 ..     464     511 ..     427     534 .. 0.73
   4 ?    4.0   0.0     0.017        38     237     270 ..    1062    1096 ..     940    1111 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 6.5e-06
      AAA_21   1 lnvliGpNgsGKSnLLdaldllarldrdvegltdelsgggg 41 
                 +n+++G NgsGKS +L a+ l  +          ++s+++ 
  KHJ30520.1 135 INFVVGMNGSGKSAVLTAITLCLG---------GKASNTNR 166
                 79*****************99853.........33333333 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.77
      AAA_21 115 argirggvsvfslkelsvsepndlqfgkaltditsrawsllllldglrkerigllnifadyfgfakekrllqrlvrslklve 196
                 +  + ++ +++ l+e++++  +++q++++  ++++ ++++ +  ++l+++ +  l+i  d++g+ +e + + r   +    +
  KHJ30520.1 342 YAWAQVVDQENILAEKERAVLEIQQRIEDDERLVANHDRSFQKAEELLNRSKESLQILTDEAGPIREAEETARSAYEAASLD 423
                 5556667777788888888888999999999999999999999999999988888888888887777777666555555544 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 1.5
      AAA_21  68 qgvryryglrlersqv..eeklssvetllesgllldkrsleeedvfnp 113
                  g+  r  ++++r +   +e++ss ++  e  +l d + +e   + n 
  KHJ30520.1 464 GGSHARKQAEIDRADEklKETISSHRKSVEGLPLIDQKYDEAKINLNR 511
                 566667777788888888888888888888888777777766665555 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.017
      AAA_21  237 lSdGtkrll..alltallralkkgsllliDEpEngL 270 
                  lS G k++   +ll+al++a +  +l ++DE++ ++
  KHJ30520.1 1062 LSGGEKSFSsiCLLLALWEAMGA-PLRCLDEFDVFM 1096
                  69999999778**********99.********9876 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   3.6e-06     0.008      22      59 ..     132     169 ..     115     171 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 3.6e-06
      AAA_29  22 kg.atlltGpsGsGKSTllDAiqalLvpakkvrfNkaan 59 
                    + +++G +GsGKS++l Ai+  L ++   + N  +n
  KHJ30520.1 132 GPlINFVVGMNGSGKSAVLTAITLCLGGKA-SNTNRGSN 169
                 3457899**************999888887.78887665 PP

>> Glyco_hydro_1  Glycosyl hydrolase family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.6   1.2e-05     0.027     274     380 ..     265     374 ..     242     394 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.2e-05
                    ---HHHHHHHTT--SEEEEEEEEEEEEEE--...-STT---SSGGGGG-SBSS-B-SSSS-B-HHHHHHHHHHHHHTS----EEEEE----EE-BS CS
  Glyco_hydro_1 274 eiteedkellkgkadflglnyYtsrlvknkeseeaslskteekkleeevdpslpktdigwiiepeglrkllellkkeYqklpiyiteNGlgakdei 369
                    +  +e +++ ++ +++ +ln+ +s +  + +  ea+l++++++ +e e + s+ + + + + +  g+rk  ++l+k+Y   +++  eN l++k+  
     KHJ30520.1 265 STPAEKYKFFAEGVQLEALNNDYSLIFDTCDAIEAKLEESKDDIAELEREASVAREKAEAARQHDGMRKTASILSKKYAWAQVVDQENILAEKERA 360
                    34456677779999999***999999999999*************************************************************987 PP

                    SS...HHH--HHHH CS
  Glyco_hydro_1 370 ee...gkveDdkRi 380
                    +    +++eDd+R+
     KHJ30520.1 361 VLeiqQRIEDDERL 374
                    6457799*****97 PP

>> SMC_hinge  SMC proteins Flexible Hinge Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       7.4   1.7e+04      34      73 ..     228     267 ..     226     276 .. 0.72
   2 ?   13.0   0.0   4.3e-05     0.096       5     116 ..     566     680 ..     562     681 .. 0.85
   3 ?   -3.5   0.1       5.4   1.2e+04      21      50 ..     879     906 ..     875     915 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 7.4
   SMC_hinge  34 vvedeetakkiieflkkknagratflpldrikqknkadga 73 
                 v   +++++ i+ef + +    +++l  d++k++ +++ +
  KHJ30520.1 228 VSTKKADVEDIVEFYQLQVDNPMNILTQDKAKSFLHQSTP 267
                 4555778888999988887777888888887777666655 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 4.3e-05
   SMC_hinge   5 lGrladlievd.egyekAveaalgnrlqalvvedeetakkiieflkkknagratflpldrikqknkadgandkns..gavplidlvevdde.lrkal.. 97 
                 +G+l+  i+++  ++   +e+ lg +l+ ++v +  + +++ ++lk+     a+f p   +  ++  d ++++ +  ++  ++ +++ d+e +r+ l  
  KHJ30520.1 566 VGPLGLHIKLKdATWGDILETQLGVQLNGFIVTNTSDQRRMSNYLKSY--NMANFCPVMIMGENQIIDTTENE-PdpQYLTVLRVLDIDNElVRQHLii 661
                 688888899998999999******************************..57999999555555555555554.45899999*********99987766 PP

   SMC_hinge  98 ryllgdtlvvdsldeAeel 116
                 ++++ +tl+ +  ++A+++
  KHJ30520.1 662 NQAIEQTLLIKHREDALKV 680
                 9**********99999987 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 5.4
   SMC_hinge  21 Aveaalgnrlqalvvedeetakkiieflkk 50 
                 A ++al ++ +a+vv    + +k +  lk+
  KHJ30520.1 879 ARHTALREKNSAIVVLERRQHEKSV--LKR 906
                 6678999999999998888887765..444 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0     4e-05      0.09      14      55 ..    1043    1083 ..    1033    1099 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 4e-05
     SbcCD_C   14 vevrdedgkeke.lsrssgtlSGGekqflaylalaaalaalys 55  
                  v v+ +d++ ++   r+++tlSGGek  + +++l++al  +++
  KHJ30520.1 1043 VHVE-PDKAVVTgKGRQTKTLSGGEK-SFSSICLLLALWEAMG 1083
                  4444.222222236799*********.999*******988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1907  (0.106364); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.20u 0.31s 00:00:01.51 Elapsed: 00:00:00.52
# Mc/sec: 6778.19
//
Query:       KHJ30521.1  [L=423]
Description: putative pdcd2 c terminal domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-46  158.4   0.1    9.5e-46  156.1   0.0    2.0  2  PDCD2_C        Programmed cell death protein 2, C-terminal pu
  ------ inclusion threshold ------
      0.025   14.9   0.0      0.051   13.9   0.0    1.5  1  ArsD           Arsenical resistance operon trans-acting repre
      0.032   14.1   0.2        2.5    8.1   0.0    2.7  2  zinc_ribbon_4  zinc-ribbon domain
      0.033   12.3   0.0      0.046   11.9   0.0    1.1  1  RHD3           Root hair defective 3 GTP-binding protein (RHD


Domain annotation for each model (and alignments):
>> PDCD2_C  Programmed cell death protein 2, C-terminal putative domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.28   1.2e+03      88     115 ..      39      64 ..      31      73 .. 0.74
   2 !  156.1   0.0   2.1e-49   9.5e-46       2     175 .]     240     419 ..     239     419 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.28
     PDCD2_C  88 ggkPLwlsskkspeeesdipkCsnCgsk 115
                 gg+P w+ s + p+ + ++ kC+ C++ 
  KHJ30521.1  39 GGQPHWIDSLTPPS-A-SLVKCKTCHNF 64 
                 89999999654444.3.6999****875 PP

  == domain 2  score: 156.1 bits;  conditional E-value: 2.1e-49
     PDCD2_C   2 pelel.vveee.peekekeeeseedkeekekseleellseeeeeekskeekeseeeelekyeksldktfekFkkriaaepeQvlRYelggkPLwls... 95 
                 p l+l + ++e  +    ee++ +++ e  k+e+++         ++++ + s++e++  +e+s+d+tf+kF++r++++peQv+RYe++g+PL+++   
  KHJ30521.1 240 PMLYLvDSDYEiLD---IEEKKIPNHLE--KMEIDS---------ENNKGQGSSKEDKLIFESSIDQTFQKFADRMSQNPEQVIRYEYNGQPLLYAknd 324
                 55566333443222...22222332222..223333.........22222334567777889999********************************** PP

     PDCD2_C  96 ................skkspeeesdipkCsnCgskrvFEfQlmPqlinvLeveee.ekesldWgtilVytCeksCeekeeeeneegyveEfvlvQw 175
                                 + + ++++++ip+C+nCg++rvFEfQl+P++i++Le+ ++   ++++Wgti+V +C+++C+ +++ ++ +gy+eE+v+vQw
  KHJ30521.1 325 rvgklfnyggneglklA-TVTTSSNRIPRCENCGASRVFEFQLTPHAISELEKGDDnIMDGMEWGTIIVGVCQNDCQ-QKGVTDGVGYLEEWVGVQW 419
                 ***************64.44455559**************************9888689*****************8.566899************9 PP

>> ArsD  Arsenical resistance operon trans-acting repressor ArsD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.1e-05     0.051      25      78 ..     293     343 ..     285     352 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.1e-05
        ArsD  25 elvriaadvdalkkkgveveRynlaqepqaFvenkavkellekkgaeaLPlvlv 78 
                 +   +++  d ++++  +v Ry  + +p  +++n+ v +l++  g+e L l  v
  KHJ30521.1 293 T---FQKFADRMSQNPEQVIRYEYNGQPLLYAKNDRVGKLFNYGGNEGLKLATV 343
                 4...566678899999********************************988777 PP

>> zinc_ribbon_4  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0   0.00056       2.5      16      33 ..      46      63 ..      45      65 .. 0.88
   2 ?    3.2   0.1     0.019        86       4      13 ..     352     361 ..     350     372 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00056
  zinc_ribbon_4 16 deklpakgvkvrCskCgh 33
                   d+  p++++ v+C+ C +
     KHJ30521.1 46 DSLTPPSASLVKCKTCHN 63
                   67889***********86 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.019
  zinc_ribbon_4   4 tCpsCkakye 13 
                    +C++C+a + 
     KHJ30521.1 352 RCENCGASRV 361
                    6888888765 PP

>> RHD3  Root hair defective 3 GTP-binding protein (RHD3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     1e-05     0.046     469     563 ..     256     346 ..     247     379 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1e-05
                 .......STSS---TTTTCTTHHHHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHTBBSSTBB----SHHHHCCSSHHHHHHTTSSHHHHTT CS
        RHD3 469 vsklkdavsgfelseeevdkalknlkkkswlvlekkikeelseekillrlrdrFedvFryDedgvPrlwkkkedieaiykearekaLkllsvlsv 563
                 ++k+ +++++ e+++e+++       k+ +l++e+ i++    +k   r+ ++ e+v ry+ +g P l+ k++ + + ++   ++ Lkl  v ++
  KHJ30521.1 256 EKKIPNHLEKMEIDSENNKGQGS--SKEDKLIFESSIDQTF--QKFADRMSQNPEQVIRYEYNGQPLLYAKNDRVGKLFNYGGNEGLKLATVTTS 346
                 55667777777887776654433..4567899*******99..99*******************************************9999776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       738  (0.0411624); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3083.84
//
Query:       KHJ30522.1  [L=602]
Description: putative cystathionine gamma-synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-36  124.8   0.0    4.3e-36  124.3   0.0    1.2  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
  ------ inclusion threshold ------
       0.12   11.2   0.0       0.71    8.7   0.0    2.1  2  mTERF            mTERF


Domain annotation for each model (and alignments):
>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.3   0.0   4.8e-40   4.3e-36      60     381 ..     272     596 ..     261     597 .. 0.87

  Alignments for each domain:
  == domain 1  score: 124.3 bits;  conditional E-value: 4.8e-40
                      HHHHHHT-..SEEEEESSHHHHHHHHHHTTS-T.TE.EEEEESTSSHHHHHHHHHTHHHTTCEEEEESTTSHHHHHHHCCT..TEEEEEEESS- CS
  Cys_Met_Meta_PP  60 riaaLegg..eaalavssGmaAiaaailallka.Gd.eivvsddlYggtqrllkkvlkklgievkfvdtsdleelekaike..ntklvylEtpt 147
                      +i+ + g   + +++ ++Gm +i+++   ++ka G  + ++    Y  t ++l+k+  + +i + +   +dl++lek +k   +  +++ E p+
       KHJ30522.1 272 NICRMMGLseNDVYLWPCGMNSIFHTHNMIMKArGAmKSISFGFPYVDTLKVLEKFG-HGCIFYGHGSSEDLDDLEKRLKAgeRYLALFCEFPG 364
                      566665543356788999999999999999988644146777778888888887764.45577888888999*****9997558889******* PP

                      TTTT----HHHHHHHHHHTT-EEEEEGTTTHTTTS-GGGGT-SEEEEETTTTTTCSSS--EEEEEESSCHHHHHHHHH.HHHHHT-B--HHHHH CS
  Cys_Met_Meta_PP 148 npllkvvDiekiaklakkagvlvvvDntfaspllqrplklgaDivvhSaTKylgGhsdvvaGvivvkgkeelkkelkf.lqnalGavlspfdaw 240
                      npllk +D+ +i +la + +  vvvD t+   ++++ l + aD+vv S TK  +G  +v +G  + + + +  +++k+ + ++   +  + da 
       KHJ30522.1 365 NPLLKSPDLLRIRELANAYDFAVVVDETIGNFINVNVLPY-ADVVVSSLTKIFSGECNVTGGSSIINPNGRYYNSFKKiADRDYEDIYWAEDAI 457
                      **************************************99.9********************8777776777777766267999********** PP

                      HHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEE-TTS.TTSTTHHHHHHHSSSG-SEEEEEESSHHHHHHHHHHC-SSSEECSS-SSSS- CS
  Cys_Met_Meta_PP 241 lllrGlkTLslRlerhqenAlkvAefLekhpkvekvyYpgl.pshpqhelakkqlkgaggvlsFelkseeekakkfvdnlklfslaeslGgves 333
                       + r  +    R+e+ +enA ++   Le+hp v+k+yYp   ps+++++  +  + g+gg+lsF+l+   ++a +f d+++l++   slG   +
       KHJ30522.1 458 FMERNSRDFVTRIEKINENAEAICDVLERHPFVTKIYYPKCnPSKENYDACRTPNGGYGGLLSFRLQRP-QQAIAFYDHIELAK-GPSLGTNFT 549
                      ***************************************8648999*********************99.78*********976.79******* PP

                      EEEETTTTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHH CS
  Cys_Met_Meta_PP 334 lielpasmthasipkeereaagvtddliRlsvGiEdvdDliaDlkqal 381
                      l++  ++  h  ++ +  ++ gv  dliR+svG+Ed ++li  ++++l
       KHJ30522.1 550 LVSPYVVLAH-FLELDWAAQFGVHADLIRVSVGLEDRKELITKFENSL 596
                      *985555555.68888999*************************9998 PP

>> mTERF  mTERF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0     8e-05      0.71      80     164 ..     215     285 ..     196     329 .. 0.73
   2 ?   -1.1   0.0     0.077   6.9e+02      97     137 ..     458     523 ..     423     544 .. 0.63

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 8e-05
       mTERF  80 kvdkssigellrslplilgskvenkiknlvevLrelGvpkkllarllisrpqvlaldlekkvkpkeieekVevlkelglskedvw 164
                 ++ ks+    +++ + +   + +++++ +v+ + +l +++++ ++l+  + +v     ek++ ++      ++++ +gls++dv 
  KHJ30522.1 215 SNPKSE----IQESSRFIEERFGRNLDVVVSEFAKLAIRRRIAGSLIDDNLSVT----EKQL-NE-----LNICRMMGLSENDVY 285
                 334444....445566677788899************************99998....5555.33.....688888888888875 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.077
       mTERF  97 lgskvenkiknlvevLrelGvpkkllarllisrpq............................vlaldl 137
                 +    e++ + +v  ++++  + ++++ +l+++p                             +l+++l
  KHJ30522.1 458 FM---ERNSRDFVTRIEKINENAEAICDVLERHPFvtkiyypkcnpskenydacrtpnggyggLLSFRL 523
                 44...3445688999999999999999999999985555555555555555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (602 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       448  (0.0249875); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 3858.16
//
Query:       KHJ30523.1  [L=278]
Description: putative ubiquinone biosynthesis protein coq9 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-30  104.8   0.4    5.9e-30  102.9   0.0    1.9  2  COQ9      COQ9


Domain annotation for each model (and alignments):
>> COQ9  COQ9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1     0.065   1.2e+03      30      40 ..     121     131 ..     116     137 .. 0.81
   2 !  102.9   0.0   3.3e-34   5.9e-30       3      76 ..     178     251 ..     177     252 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.065
        COQ9  30 nwYtkRatLsa 40 
                   Yt+R++L a
  KHJ30523.1 121 HLYTQRLALKA 131
                 67******987 PP

  == domain 2  score: 102.9 bits;  conditional E-value: 3.3e-34
        COQ9   3 naptslrelarlaDdiwraagDkstDfnwYtkRatLsavyastelymlqdksedfedtwaFldrriddvmalek 76 
                 n+ ts++el  l+D+iw+++gD s+D++wYtkRa+L++vy+stel+ml dks++fe+t +Fl+rr++dv+++++
  KHJ30523.1 178 NILTSIKELSLLVDEIWYLSGDISVDTSWYTKRASLATVYTSTELFMLADKSPGFEETSQFLERRLADVQKVGS 251
                 8899******************************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       300  (0.0167327); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2020.20
//
Query:       KHJ30524.1  [L=298]
Description: putative general stress response protein whi2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       234  (0.0130515); expected 358.6 (0.02)
Passed bias filter:                      226  (0.0126053); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 2294.49
//
Query:       KHJ30525.1  [L=266]
Description: hypothetical protein EV44_g0326 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00049   19.9   5.7    0.00049   19.9   5.7    2.7  3  Mid2            Mid2 like cell wall stress sensor
  ------ inclusion threshold ------
       0.55   10.1   4.4       0.15   11.9   0.4    1.8  2  EssA            WXG100 protein secretion system (Wss), protei
        4.9    6.5  12.5      0.099   12.0   3.7    2.0  2  DUF5305         Family of unknown function (DUF5305)


Domain annotation for each model (and alignments):
>> Mid2  Mid2 like cell wall stress sensor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1      0.54   3.2e+03      65      84 ..      10      29 ..       7      39 .. 0.76
   2 ?   -5.3   6.8         3   1.8e+04       7      43 ..      79     110 ..      66     118 .. 0.50
   3 !   19.9   5.7   8.2e-08   0.00049       5      65 ..     138     203 ..     134     213 .. 0.70

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.54
        Mid2 65 llllyifCikskrtdfidsd 84
                l+ + +fC+   ++++++ +
  KHJ30525.1 10 LCAFVFFCLSVAQANWLNDN 29
                5566789**99999999865 PP

  == domain 2  score: -5.3 bits;  conditional E-value: 3
        Mid2   7 siiegktiLsdlyttvtytptataessnkskssGLsk 43 
                 + +  +t      +  t tp  t++ss+k++++  s 
  KHJ30525.1  79 TTLTSQT-----LSPPTSTPAITSTSSSKHNTESSST 110
                 3344444.....3333444444444444333333333 PP

  == domain 3  score: 19.9 bits;  conditional E-value: 8.2e-08
        Mid2   5 itsiie..gktiLs.dlyttvtytptataessnk.skssGLskknrniviGcvvGi.gvPlllvil 65 
                 its++   g+ + s  ++t +t  p++ ++ss+  ++ssGL +k +n ++G+v Gi g+ +l  i+
  KHJ30525.1 138 ITSVVTvsGSVVTSvSSSTEITKVPSEPTSSSSPvNSSSGLGSKTKNTIVGVVAGIiGLAILAGII 203
                 67776411555655145667999999866665555********************72555544333 PP

>> EssA  WXG100 protein secretion system (Wss), protein EssA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.4      0.29   1.7e+03      95     107 ..     102     114 ..      90     150 .. 0.58
   2 ?   11.9   0.4   2.4e-05      0.15      96     147 ..     156     210 ..     147     211 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.29
        EssA  95 eYevrasasevas 107
                 + ++  s++ +++
  KHJ30525.1 102 KHNTESSSTTTKQ 114
                 2222222222222 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 2.4e-05
        EssA  96 YevrasasevassetaeEesi...sktkskiiilliaggv.valaiGlyvvlrkvl 147
                  e +++ se +ss + ++ s    skt +++i++++ag++ +a+  G+ +v rk+l
  KHJ30525.1 156 TEITKVPSEPTSSSSPVNSSSglgSKT-KNTIVGVVAGIIgLAILAGIIIVTRKLL 210
                 566777777766666555543233677.56666777666559************87 PP

>> DUF5305  Family of unknown function (DUF5305)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.2   7.2         3   1.8e+04      72     110 ..      78     119 ..      54     141 .. 0.56
   2 ?   12.0   3.7   1.7e-05     0.099      69     143 ..     124     212 ..     112     227 .. 0.77

  Alignments for each domain:
  == domain 1  score: -5.2 bits;  conditional E-value: 3
     DUF5305  72 esktsrlpiplteqtyeikkdetd...eengeitetvtvkes 110
                 +++ ++ ++++ ++t  i++++++   +e++++t+++ +++ 
  KHJ30525.1  78 TTTLTSQTLSPPTSTPAITSTSSSkhnTESSSTTTKQITTDT 119
                 333344456666666666666655332333333333333333 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 1.7e-05
     DUF5305  69 sieesktsrlpiplteqtyeikkdetdeengeitetvtvkespslae..............gilliilgllaliglvvlirriiftssk 143
                 ++++++ ++++i+l +++++++++   + +++++ t+  +e+ s  +               i+++++g+++l++l+ +i ++++  s 
  KHJ30525.1 124 TRTTTFEPSTTIELITSVVTVSGSVVTSVSSSTEITKVPSEPTSSSSpvnsssglgsktknTIVGVVAGIIGLAILAGIIIVTRKLLSR 212
                 567899999**************999866666555555555444444678999*******999*************9999997776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1488  (0.082994); expected 358.6 (0.02)
Passed bias filter:                      648  (0.0361426); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.32s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 1818.92
//
Query:       KHJ30526.1  [L=242]
Description: hypothetical protein EV44_g5467 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1844.85
//
Query:       KHJ30527.1  [L=242]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.086   13.2   0.4       0.23   11.9   0.1    1.8  2  EntA_Immun  Enterocin A Immunity


Domain annotation for each model (and alignments):
>> EntA_Immun  Enterocin A Immunity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.54   9.6e+03      21      27 ..      36      42 ..      23      45 .. 0.58
   2 ?   11.9   0.1   1.3e-05      0.23      15      49 ..      76     111 ..      71     112 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.54
  EntA_Immun 21 eelrevL 27
                +elr+++
  KHJ30527.1 36 QELRQII 42
                2244444 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 1.3e-05
  EntA_Immun  15 peikenee.lrevLltaknklekgknvsvvasrLeq 49 
                 +  ke+++ +r  L +a+ +l+ ++n++++ +rL++
  KHJ30527.1  76 DIEKEEADiIRNYLQQAIARLAASDNAPKLFVRLSK 111
                 445777779*************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       848  (0.0472977); expected 358.6 (0.02)
Passed bias filter:                      682  (0.0380389); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 1947.65
//
Query:       KHJ30528.1  [L=361]
Description: putative ser thr protein phosphatase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-13   52.1   0.0    1.6e-13   51.6   0.0    1.2  1  Metallophos    Calcineurin-like phosphoesterase
    3.6e-06   27.3   0.3    1.3e-05   25.5   0.3    1.9  1  Metallophos_2  Calcineurin-like phosphoesterase superfamily d
  ------ inclusion threshold ------
       0.12   12.4   1.6       0.29   11.1   1.6    1.6  1  Cut12          Spindle pole body formation-associated protein


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   0.0   2.7e-17   1.6e-13       2     170 ..     121     317 ..     120     352 .. 0.77

  Alignments for each domain:
  == domain 1  score: 51.6 bits;  conditional E-value: 2.7e-17
                  EEEEEESBTBTTCCTHHHHHHHHHHHHHHHTTESEEEEESTSSSSSHHHHHHHHHHHHHHHHTSEEEEEC-TTS..........CHHHHHHHHHHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddllreekpdlvllaGDlvdrgdlekellellaalvkypipvylllGNHe..........gfeeellnkygylg 89 
                  r++ igD+H     g   +l++ll+++  ++ +d v+l+GDl+  g+ +  +++l  +l++      +++GNHe          +     ++k +  +
   KHJ30528.1 121 RLIMIGDIH-----GMKKELENLLEKIVFNPTRDHVILVGDLIAKGPDSLGVVDLAMRLGA-----TCVRGNHEdqaiqawddmQ----AEEKTTIAN 204
                  6788*****.....***********************************************.....9********9998555552....333333333 PP

                  HH....HHHHEHH............HCEEETSEEEEEETTE...EEEEEEESE.CEEE......THHHHHHHHHHHSCHHHHCC.....HHHHHH... CS
  Metallophos  90 if....sepwrsd............aevfnnlplaslgsgs...lkvlllhGg.spel......lvsldklgslnleleapepg.....dewlkd... 153
                   +    s+p+ ++             ++   +p++  ++g     +vl++h+g +pe       l+ +++++s+++   ++ ++     +    +   
   KHJ30528.1 205 GTlaiaSKPYDKKhmhlaqslgkerIDWIKTWPIILRVGGLgsmGEVLVAHAGlDPEVplekqdLYMVMNMRSIKHGAYTDKHEgkvwtK----Kwnk 298
                  3344334555444777777777777999999999998888889*99*******86666889999*************9999999955543....4333 PP

                  ..HHHHTTCSEEEEEESSE CS
  Metallophos 154 ..lekrekadwvivlgHsp 170
                    +  + + + +++ gH  
   KHJ30528.1 299 yqNTLKQEMRRTVIYGHDA 317
                  4766666666666666655 PP

>> Metallophos_2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.3   2.2e-09   1.3e-05       2      77 ..     121     202 ..     121     329 .. 0.76

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 2.2e-09
  Metallophos_2   2 klaiiSDlHsnldaleavlealke.vgvdaiihaGDleeeepe..vleellelapvlaVrGNnDeev...veedvlreaael 77 
                    +l++i D+H+  ++le++le++    + d++i++GDl ++ p+   + +l +++  + VrGN+++++   ++++ ++e++++
     KHJ30528.1 121 RLIMIGDIHGMKKELENLLEKIVFnPTRDHVILVGDLIAKGPDslGVVDLAMRLGATCVRGNHEDQAiqaWDDMQAEEKTTI 202
                    5789****************98742567********945555534778888888**********444433444444433333 PP

>> Cut12  Spindle pole body formation-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.6   4.8e-05      0.29      66     101 ..     289     324 ..     286     328 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4.8e-05
       Cut12  66 GkYWkseFesyrsdaelEieklikyrslaksyakkK 101
                 Gk W +++++y++ +++E+++ + y + ak   + K
  KHJ30528.1 289 GKVWTKKWNKYQNTLKQEMRRTVIYGHDAKRGLRIK 324
                 9************************99999766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2714.05
//
Query:       KHJ30529.1  [L=489]
Description: putative histidyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.1e-41  141.2   0.0    5.4e-41  140.9   0.0    1.2  1  tRNA-synt_His    Histidyl-tRNA synthetase
    1.1e-12   47.9   0.0    2.3e-12   46.9   0.0    1.6  1  HGTP_anticodon   Anticodon binding domain
    3.2e-05   24.0   0.0    0.00013   22.0   0.0    2.0  1  tRNA-synt_2b     tRNA synthetase class II core domain (G, H, 
     0.0022   17.6   0.0     0.0032   17.0   0.0    1.2  1  HGTP_anticodon2  Anticodon binding domain of tRNAs
     0.0037   16.4   0.0      0.013   14.6   0.0    1.8  2  tRNA-synt_2      tRNA synthetases class II (D, K and N)
  ------ inclusion threshold ------
      0.045   14.1   0.0      0.098   13.0   0.0    1.5  1  HHH_8            Helix-hairpin-helix domain
       0.13   12.0   0.0       0.25   11.1   0.0    1.4  1  MOZART1          Mitotic-spindle organizing gamma-tubulin rin


Domain annotation for each model (and alignments):
>> tRNA-synt_His  Histidyl-tRNA synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.9   0.0   2.1e-44   5.4e-41       2     310 .]      16     349 ..      15     349 .. 0.87

  Alignments for each domain:
  == domain 1  score: 140.9 bits;  conditional E-value: 2.1e-44
                    ---EETCHHHHHHHHHHHHHHHHHHTT-EEEE--SEEEHHHHCTTSTCCHHHS-EEE-TTSSEEEE-SSSHHHHHHHHHHHHHTSS-EEEEEEEEE CS
  tRNA-synt_His   2 lrdllpeeaekieelrrrlldlfeswGYelVspPllEyldslltgagedldqtfklvDqsgrllglRaDiTpqvaRiaahrlnrerplRlcYaGsv 97 
                    ++d   +++  +e++ ++++d+f+++G   + +P++E  d l  + ged++ ++ l Dq g+l +lR D+T+  aR  a +   +++ R+  +G+v
     KHJ30529.1  16 TKDWQGKDMVIRESIFSAITDVFKRHGAVTIDTPVFELKDILSGKYGEDSKLIYDLADQGGELCSLRYDLTVPFARWLAMNRDIQSIKRYQ-IGKV 110
                    66777788888999*******************************************************************99****9986.8*** PP

                    EESS-SS..TT--CCEEEEEEEEESS-.SHHHHHHHHHHHHHHHHHHCTSSSEE.EEEEETCHHHHHHHHTT--HHHHHHHHHHHHCT-HHHH... CS
  tRNA-synt_His  98 lrtrpdg..lgrsreplQvGaEliGae.gleadlEvlslllealeaaagvkelr.ldlghvglvralleaaglsesleeallaalarkdlael... 186
                    +r+ +     gr re++Q+   + G+   +  d+E+++++ e+++ ++g k++  ++l+h ++++ ++e++g++++  +a+ +a+++ d a     
     KHJ30529.1 111 YRRDQPAvnKGRMREFYQCDFDIAGTYdPMLPDAEIVRIASEVFN-SLGWKGCYlIKLNHRKILDGIFESCGVPHDNIRAISSAIDKLDKAPWeev 205
                    *88777634589*************9846778************6.***88876269***************************999997655111 PP

                    .HHHHHCCTTHHHCCHCC....HCCHCCCHHHH..CHCCHCTHHHHHHHHHHHHHHHHHHHHHHHH-TTEEE-TT--TTTTT--SEEEEEEE.... CS
  tRNA-synt_His 187 .kelaaeaglkealrellkal.elygdaevlee..alealaaapalqaaldeleelaallealakpevrvtlDlaelrgyeYytGlvFaaya.... 274
                     ke+++++gl+++ ++ +  +   +g+++ l +  a e++a+++a++a ++el+ l ++lea++    +v++Dl++ rg++YytG++F++++    
     KHJ30529.1 206 rKEMVDQKGLDPKIADKIGEYvVQKGQKDLLSKlmADENMAENKAARAGMEELDLLFNYLEAFN-VMDNVSFDLSLARGLDYYTGVIFEIVMvdpi 300
                    24577789999**********66666666666522346899999999999************96.689***********************99999 PP

                    .........TT-SS..-SEEEEEECTTTGGG..T---EEEEEEEEHHHH CS
  tRNA-synt_His 275 .........egvgq..aiarGGrYdelgaaf..grarpAtGfsldleal 310
                             ++ +    ia GGrYd+l+++f  +++ p++G s+ +e++
     KHJ30529.1 301 caesnyqtsDNIHGvgSIAAGGRYDNLVGMFsgKNQIPCVGISFGVERI 349
                    99988766533332569**************944689********9986 PP

>> HGTP_anticodon  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.9   0.0   8.8e-16   2.3e-12       1      93 [.     372     472 ..     372     477 .. 0.89

  Alignments for each domain:
  == domain 1  score: 46.9 bits;  conditional E-value: 8.8e-16
                     SEEEEESSSS..HHHHHHHHHHHHHHHHTTTSEEEEES.SSSTHHHHHHHHHHTT-SEEEEE-HHHHHHTEEEEEET......TTCEEEEEETTH CS
  HGTP_anticodon   1 qvvviplnek..aeeleeyakklaeeLraagirveldd.snesigkkireadllgipfavvvGekelekgtvtvrdr......dtreqervslde 86 
                     +++v++++ k  +  l+ ++ +++  L++agi++e+ +  + ++  +++ a+  g+pf++v+G++el +g+v+++++       ++e + ++l++
      KHJ30529.1 372 DCYVMAFGGKgfTG-LLRERISICTTLWEAGIKAEFLYkIKPKLPNQFKAAEANGVPFCIVIGDDELAEGKVKIKEMglrdghPEKEGVLIDLKD 465
                     57888888888555.999999*****************99*************************************998654445557999999 PP

                     HHHHHHH CS
  HGTP_anticodon  87 lveklke 93 
                     +ve +++
      KHJ30529.1 466 IVEQVQQ 472
                     9999886 PP

>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0     5e-08   0.00013      37     110 ..     102     229 ..      89     357 .. 0.60

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 5e-08
                   EEEEEEEEEEBTTTS.TBCTTTB-SEEEEEEEEEEES.GGGHHHHHHHHHHHHHHHHHHTT.SCEEEEEEGTTSC...................... CS
                   xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...................... RF
  tRNA-synt_2b  37 lklyqiqtkyRdEks.dsrGLlRvreFhqkdgyvfha.easlddslrdlikaisriferlglefraiielmsaks...................... 109
                   +k yqi+ +yR+ ++   +G  R+reF q d  + ++ +  l+  ++++++ +s++f++lg +   +i+l+++k                       
    KHJ30529.1 102 IKRYQIGKVYRRDQPaVNKG--RMREFYQCDFDIAGTyDPMLP--DAEIVRIASEVFNSLGWKGCYLIKLNHRKIldgifescgvphdniraissai 194
                   6789**********95666*..***************555444..689***************9999999886546677776666666666664444 PP

                   ..................................B CS
                   ..................................x RF
  tRNA-synt_2b 110 ..................................a 110
                                                      
    KHJ30529.1 195 dkldkapweevrkemvdqkgldpkiadkigeyvvQ 229
                   44444444444444444444444444444444440 PP

>> HGTP_anticodon2  Anticodon binding domain of tRNAs
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   1.2e-06    0.0032       6      85 ..     371     450 ..     367     481 .. 0.72

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.2e-06
  HGTP_anticodon2   6 cDVlVasfdks...iLrtsgvellqeLWahnIsAdlaldasksleelvskarddgvswiviikqqnkskskekplkvkslekk 85 
                      +D++V+ f  +    L  +++++ ++LW+ +I+A++ ++ +  l +  + a+ +gv + ++i  ++ ++    ++k+k++   
       KHJ30529.1 371 VDCYVMAFGGKgftGLLRERISICTTLWEAGIKAEFLYKIKPKLPNQFKAAEANGVPFCIVIGDDELAEG---KVKIKEMGLR 450
                      67777777653222344899*******************999**********************774444...4888888643 PP

>> tRNA-synt_2  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0     5e-06     0.013      22     123 ..      24     134 ..      16     157 .. 0.73
   2 ?   -3.2   0.0       1.3   3.4e+03     282     298 ..     337     353 ..     325     356 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 5e-06
                  HHHHHHHHHHHHHHHHHTT-EE----SEESS-..-SSSS--EEEEETTT.T.......EEE.-E-S-SHHHHHHHHHCTHSEEEEEEEEE--S--BTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxx.......xxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2  22 lrlrstvtkavrkyleengfieietPiLsksd..teegarlFkvksrekek.......eff.aLtqspqlylellivagidrvfqiaraFRaEdsrtd 109
                  + +r+++ +a+ ++++++g + i+tP++  +d  +++ +++ k+     ++       ++    + +  l   + i +   + +qi++++R  +   +
   KHJ30529.1  24 MVIRESIFSAITDVFKRHGAVTIDTPVFELKDilSGKYGEDSKLIYDLADQggelcslRYDlTVPFARWLAMNRDIQS--IKRYQIGKVYRRDQPAVN 119
                  679***********************9766654455555666665555533354454333344555666666666777..5669*******9998754 PP

                  B.-S-CEEEEEEEEE CS
                  x.xxxxxxxxxxxxx RF
  tRNA-synt_2 110 r.hlaEFtqieaems 123
                  +  + EF+q+++ ++
   KHJ30529.1 120 KgRMREFYQCDFDIA 134
                  42788******9875 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.3
                  -SEEEEEEEHHHHHHHH CS
                  xxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 282 pphgGlglGldRlvmll 298
                   p  G+ +G++R+  ++
   KHJ30529.1 337 IPCVGISFGVERIFSIV 353
                  57889999999988765 PP

>> HHH_8  Helix-hairpin-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   3.8e-05     0.098      33      67 ..     192     227 ..     186     228 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.8e-05
                 CCCCC-SS.-HHHH.TTHCTTSTT--HHHHHHHHHHH CS
       HHH_8  33 raiealpe.eitsl.eeeltklpgiGkkiaakieeil 67 
                 +ai++l++ + +++ + e+ + +g+ +kia+ki e++
  KHJ30529.1 192 SAIDKLDKaPWEEVrK-EMVDQKGLDPKIADKIGEYV 227
                 6899999999999944.5*****************97 PP

>> MOZART1  Mitotic-spindle organizing gamma-tubulin ring associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   9.9e-05      0.25      16      39 ..     384     407 ..     384     410 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 9.9e-05
     MOZART1  16 tgLDretLsicvkLienGVnPeaL 39 
                 tgL re +sic+ L e+G+ +e L
  KHJ30529.1 384 TGLLRERISICTTLWEAGIKAEFL 407
                 899****************99977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3524.41
//
Query:       KHJ30530.1  [L=649]
Description: putative sec1 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     2e-122  410.4   1.2   2.2e-122  410.2   1.2    1.0  1  Sec1           Sec1 family
     0.0068   16.7   0.1      0.015   15.6   0.1    1.5  1  Peptidase_C10  Peptidase C10 family


Domain annotation for each model (and alignments):
>> Sec1  Sec1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  410.2   1.2  2.5e-126  2.2e-122       1     574 [.      32     636 ..      32     637 .. 0.89

  Alignments for each domain:
  == domain 1  score: 410.2 bits;  conditional E-value: 2.5e-126
                 EEEEE-HHHHHHHHTT--HHHHHTTTEEETT..T--S-.....BTTSEEEEEE-S.-HHHHHHHHHHHHSS.....-SBS-EEEEESS---...HHHHH CS
        Sec1   1 KvLvlDkelskilssvlkvsdlleegVtkieklkkrepskrealphlkaiyflrp.tkenidrlakdfisa.....rrykeyhifftprls...eslle 90 
                 K Lvl+++l+++++s++k+s+l++ gV+ki+ l  ++ +++ +++++  +++ r  + +++ ++a d+i++     ++ +e++if++pr++   ++lle
  KHJ30530.1  32 KNLVLERSLAGPIGSFVKFSNLQDYGVDKIFFL--DNDNADASQRNV--VFIARGeNIKYVGMIA-DHIKRiqresQTGHEFSIFWVPRRTvvsNKLLE 125
                 89*********************99******99..7777799*****..*****99*********.89999999*******************999*** PP

                 ..HHHH..SG.GGGEEEEE----SEEEETTEEE-STTHHHHSTTG.....GG.......--HHHHHHHHHHHHHHH-...--EEEE-TT-HHHHHHHH. CS
        Sec1  91 ..glakadeevvkkvklkelnldfvplesdlfslnpelplsfrdlyldndnsaleeeieslldriakgLlsvllslek.kiPiirykgsaasmvakkla 186
                   g++ +d    +   + e+++ f+ple+dl+sl  el++sf dlyl++d++ ++          a++L+   +++++  +P+i+++g++a+ +a+ la
  KHJ30530.1 126 eaGVL-GD---TN---IAEFPMYFLPLEKDLLSL--ELDNSFMDLYLRKDPTPIFL--------FARALML--IQQKYgLFPRIIGIGDNAKTLADLLA 205
                 99999.88...55...55****************..999*************9999........*******..999558*************7777776 PP

                 ..............HHHHTTT......--SS--EEEEE-GGG-SSTTTS---BHHHHHHHHS--BTEEEEEE--SS............SEEEEEE--TT CS
        Sec1 187 delk.....ekidskknfese......ssrqrpvLiIlDRsvDlvtpllhqwTYqaliddllgglnnnnvvleeep............keekeaelves 262
                 ++       e+i +      +      +s++   Li++DR +Dl+tpll+q+TY +++d+++g ++nn+++ e++             +++k++++ ++
  KHJ30530.1 206 RMRLeliagEDIAE------StklgltPSTSIEGLIVIDREIDLATPLLSQLTYKGMVDEVFG-IQNNQIDIESSMigsitpsgtgasIQQKKRKIQLD 297
                 66554444422221......13466777888888****************************8.8777777777669***********99999999999 PP

                 ..-TTHHHHTTSBHHHHHHHHHHHHHHHHHHHHTTT...-TTHHHHHHHHHH-GGGHHHHHHHHHHHHHHHHHHHHS-HHH.HHHHHHHHHHHHSS--. CS
        Sec1 263 ssDeffaelrhlnfgevgeklkkeakeyqeenekkrngakesiadlkkfvaklpelqeekkklskHtnlaeellkevkkrkldellelEqdlatgesd. 360
                 ssD++f +lr++nf+ vg++l+k a+++q+e+ ++r+++k ++a+l++fv+klp +q e+++l++Htnlaee++k+++++ ++++le++q+la+g  d 
  KHJ30530.1 298 SSDKIFDQLRDKNFATVGNLLNKVARRLQTEY-ESRHTSK-TTAELRDFVNKLPAYQIEQQNLKIHTNLAEEIMKQTQTELFSKILEVQQNLAAGA-Dp 393
                 9*******************************.7888556.9***************************************************964.76 PP

                 .B--..-HHHHHHHH-TTS-H.HHHHHHHHHHHH...-B.-HT--GG....GGHHHHGGGGG........---.BGGG-------.............. CS
        Sec1 361 kkikekkvieeliaddeptseledklRLlllyslvegglkekelkellrelvqsalygleylktlrsleklgllkkrkgkksskkkss........... 448
                 ++++  ++ieeli++d p   l d+lRLl+l s+  gg+k++ l+++++ ++q a yg++++ t+ +lek++ll++r+ ++++    s           
  KHJ30530.1 394 SAQH--DLIEELISKDTP---LPDVLRLLCLESCLSGGVKSRPLENFKKMILQ-A-YGYQHILTFAALEKAQLLYSRNLSMAAMIPLSgtsnsnlgtkt 485
                 8888..66******9888...89************99****************.9.***********************999999999*********** PP

                 ............---------S.......TT-----HHHHHHHHHTTT-S-TTTS-BSS-GGGS----.......................-------- CS
        Sec1 449 ........lklikeeedeesnyd....lsgvsryaPllvrlvealikgkklssespslskkdpsqees.......................ssslrsak 512
                         +kli +e+de +++d    +sg   yaPl+vr+v+++++++ l+s      +k+  +  +                       ++s+++ +
  KHJ30530.1 486 nysylrkaFKLIVDEVDEHNPNDiayvYSG---YAPLSVRIVQSILQKQYLTSIIRGIPSKSVVN--NlsqgwrgfeealkyirgprfdilQKSDDNLD 579
                 ***********************8888888...**************999999888765444443..15699999************988655555555 PP

                 --------------S-EEEEEEEEEE-HHHHHHHHHHT...TSSSEEEEEEEEE--HHHHHH CS
        Sec1 513 ktnsaskesaekkkkqrviVffvGGvTysEiralrllskqekknkeiiigttsilnpksfle 574
                 k++s  +++++      ++++f+GG+T++E++alr+++ +e  +k+iii+tts++++ ++++
  KHJ30530.1 580 KAQSMLSSGEKG----ILFIVFLGGITFAEVAALRFIAVSE-PQKQIIICTTSVISGGRMMD 636
                 555555555555....7*********************654.7799***********99886 PP

>> Peptidase_C10  Peptidase C10 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   1.7e-06     0.015      77     150 ..     306     379 ..     262     400 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.7e-06
                    S-HHHHHHHHHHHHHHHHHTT---SSS-----HHHHHHHHHHTS---TT-EEE-GGGS-HHHHHHHHHHHHHTT CS
  Peptidase_C10  77 ateeqanavakLmrdvGvavkmeYtpegsgalssnvvkalndyfgYdkeisllsrsnysssewedlvkneleag 150
                      +++  +v++L+++v+  +++eY++  +++++ +++++ n+   Y+ e ++l+ ++   +e++++ ++el ++
     KHJ30530.1 306 LRDKNFATVGNLLNKVARRLQTEYESRHTSKTTAELRDFVNKLPAYQIEQQNLKIHTNLAEEIMKQTQTELFSK 379
                    56778899***************************************777777666555567888888777554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       831  (0.0463495); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 4554.66
//
Query:       KHJ30531.1  [L=213]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.017   13.7   0.1      0.023   13.2   0.1    1.1  1  DUF5357   Family of unknown function (DUF5357)


Domain annotation for each model (and alignments):
>> DUF5357  Family of unknown function (DUF5357)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   1.3e-06     0.023       7      50 ..     132     175 ..     128     194 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.3e-06
     DUF5357   7 iedlykkikkllvPkkayswqtliyLsvfswllsllalgvikdi 50 
                 ++dly+++kk +  + +  wqt +y  v+   l +la + i  +
  KHJ30531.1 132 ASDLYENVKKCFQSPPTKGWQTTVYHRVYGENLGILANWAIDAV 175
                 689***********************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       277  (0.0154498); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1624.19
//
Query:       KHJ30532.1  [L=572]
Description: hypothetical protein EV44_g3546 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-16   59.3   0.0    9.4e-16   58.2   0.0    1.5  2  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.2   0.0   5.3e-20   9.4e-16       2     177 ..      77     255 ..      76     284 .. 0.84
   2 ?   -3.7   0.0      0.41   7.3e+03     116     145 ..     453     481 ..     449     485 .. 0.71

  Alignments for each domain:
  == domain 1  score: 58.2 bits;  conditional E-value: 5.3e-20
       RVT_2   2 tyrlvslPkdr.kaigsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaaeeelvvhqldvdsafLnae..ldeevyv 97 
                 ++++  +Pk   +   sr+v  +k ++ ++   k+rlv+q ++    ++   + +P i+  s r+++ +aa ++l +h  dv+ a+++++  l  e++ 
  KHJ30532.1  77 VFEITTNPKTTeRLFKSRFVDEIKGKASNTPFEKSRLVIQAYNDEGKINIL-TQSPTIQRASQRIIVCIAASTDLSLHLRDVSQAYVQSTtkLSREIFA 174
                 68899999975266799*******999999999************999987.789********************************987336678*** PP

       RVT_2  98 kqPpGfeidreeekvykLnkslyGlkqapllWnekidk.vLkklgferseaesGlyvrgtgegk.livalyvddlliagsdi 177
                 k+P   + +   + v k++k lyG+  a++ W+++ +k  +++l++++s+    l   ++ +g   +v++  dd l  g++ 
  KHJ30532.1 175 KPPKEIQDNLPTNSVLKIKKPLYGIPEAGTHWFRNYHKhHIENLHMTQSTFDPCLLHTNK-KGLfGVVGIQTDDTLFIGNEE 255
                 *****999999*********************9988761577788888887777766554.444268999999987777654 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 0.41
       RVT_2 116 nkslyGlkqapllWnekidkvLkklgfers 145
                 + +++G+  ++++ ++++d++Lk+l++ + 
  KHJ30532.1 453 YVTVHGF-DSGMVIKTTLDNILKQLNLPQV 481
                 5555665.3577888999999999987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (572 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 3689.18
//
Query:       KHJ30533.1  [L=400]
Description: putative pyruvate dehydrogenase e1 component beta subunit 2-oxoisovalerate dehydrogenase beta subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-42  144.4   0.0    4.2e-42  143.8   0.0    1.3  1  Transket_pyr     Transketolase, pyrimidine binding domain
    4.8e-30  104.0   0.0    1.1e-29  102.8   0.0    1.6  2  Transketolase_C  Transketolase, C-terminal domain
  ------ inclusion threshold ------
       0.11   12.9   0.0       0.46   10.8   0.0    2.0  2  PFOR_II          Pyruvate:ferredoxin oxidoreductase core doma


Domain annotation for each model (and alignments):
>> Transket_pyr  Transketolase, pyrimidine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.8   0.0     7e-46   4.2e-42       3     176 ..      76     251 ..      74     253 .. 0.96

  Alignments for each domain:
  == domain 1  score: 143.8 bits;  conditional E-value: 7e-46
                   EEHHHHHHHHHHHHHCTTTTEEEEESSTH.HHHTTCHCCHHEGGTTEGEEE--S-HHHHHHHHHHHHHHCTTEEEEEEEEHHHHGGG..HHGGHHHH CS
  Transket_pyr   3 iawrkaeaealaellkedpevvligaDva.ggtfsvrkgllhdqgegrvidsgisEqavlgfavGaalagpllviveaqFgdFangA..qiyadqai 96 
                   i+  +a++eal   ++ d++v+l+g+Dva gg+f    gll+++g++rv++++++Eq+++gf +Gaa++g ++ i+e+qF+d++ +A  q+++++a+
    KHJ30533.1  76 INLFQAVNEALFHSMASDDSVILFGEDVAfGGVFRCSTGLLEEFGSERVFNTPLCEQGIVGFGIGAAAEG-MKAIAEIQFADYIFPAfdQLVNEAAK 171
                   67789*****************************************************************.8************************* PP

                   HCHHHH.HT--EE.EEESBSGGGSTTGTTTSBSSHHHHHHTSTTEEEE--SSHHHHHHHHHHHHHSSS.SEEEEEE-SSEEC CS
  Transket_pyr  97 rsgeak.gklkvg.vvtrlpigvgedGpehqsaeleaflrlipglkvvrPsdpaetkhllrrairredrkPvvlrlpksllr 176
                   ++++ + ++++vg +++r+p+g+ + G+  +s+++e+++++ipgl+vv P +p ++k+ll   i+++  +P+ +++pk l+r
    KHJ30533.1 172 FRYRDGaEGRNVGgLTVRMPCGAIGHGALYHSQSPESLFTHIPGLRVVIPRSPIQAKGLLISTIECK--DPCLFMEPKILYR 251
                   ***9873579999****************************************************76..6***********8 PP

>> Transketolase_C  Transketolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.1   6.4e+03      55      76 ..      87     108 ..      82     110 .. 0.81
   2 !  102.8   0.0   1.8e-33   1.1e-29       2     107 ..     268     376 ..     267     390 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.1
                      HHHHHHHSEEEEEEEEESTTSH CS
  Transketolase_C  55 lesvkktgrlvvveeavkrgGi 76 
                       +s+++ + ++++ e+v +gG+
       KHJ30533.1  87 FHSMASDDSVILFGEDVAFGGV 108
                      4688888999999999999997 PP

  == domain 2  score: 102.8 bits;  conditional E-value: 1.8e-33
                      EEEEEETTSSEEEEEETTHHHHHHHHHHHHHTT.TTCEEEEE-SEEESHHHHHHHHHHHHHSEEEEEEEEESTTSHHHHHHHHHHH..CCCTTC CS
  Transketolase_C   2 kaeilregkdvtlvayGsmveealeAaeeLeke.gisaeVvdlrtvkplDketilesvkktgrlvvveeavkrgGigsevaaalae..eafdgl 92 
                      kae+l+eg+d+t+++yG+ ++++ +A+ ++ek  g s+e++dlrtv p+Dke i +svkktgr+++v+e +++ Gig+e+aa ++e  + f +l
       KHJ30533.1 268 KAEVLKEGSDITIISYGNPLYTCSAAISKAEKYfGASIELIDLRTVYPWDKECIFQSVKKTGRCIIVHESMINAGIGAEIAASIQEnpDTFLRL 361
                      89************************************************************************************999***** PP

                      SSEEEEEEE-SSSSS CS
  Transketolase_C  93 dapvkrvggpdviep 107
                      +ap+ rv+g  + +p
       KHJ30533.1 362 EAPITRVAGWSIHMP 376
                      *********988555 PP

>> PFOR_II  Pyruvate:ferredoxin oxidoreductase core domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.43   2.6e+03       1      35 [.     155     189 ..     155     190 .. 0.73
   2 ?   10.8   0.0   7.8e-05      0.46       2      81 ..     277     354 ..     276     374 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.43
                 -SEEEEE-STHHHHHHHHHHHHHHTT--EEEEEES CS
     PFOR_II   1 AevvivamGsvagtaksavdelReegikvGllrlr 35 
                 A++++ a+  ++++a +   +  +eg +vG l +r
  KHJ30533.1 155 ADYIFPAFDQLVNEAAKFRYRDGAEGRNVGGLTVR 189
                 667777777777766666666678999***99998 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 7.8e-05
                 SEEEEE-STHHHHHHHHHHHHHH.TT--EEEEEES--BS--HHHHHHHSTT-SEEEEEE-S--TT-G-HHHHHHHHHTGGG CS
     PFOR_II   2 evvivamGsvagtaksavdelRe.egikvGllrlrtlrPFPeeelkellkkvkkvvvldrnisfgseGqlveevkaalkks 81 
                 ++ i+ +G    t+ +a+ ++ +  g ++ l+ lrt++P  +e + + +kk+ + + +  ++   ++  ++ e++a+++++
  KHJ30533.1 277 DITIISYGNPLYTCSAAISKAEKyFGASIELIDLRTVYPWDKECIFQSVKKTGRCIIVHESM---INAGIGAEIAASIQEN 354
                 899***************9886526******************9988888776655555555...3555677777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2951.88
//
Query:       KHJ30534.1  [L=656]
Description: putative glycoside hydrolase family 5 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-07   31.2   0.5    1.4e-07   31.2   0.5    1.9  2  Cellulase  Cellulase (glycosyl hydrolase family 5)
  ------ inclusion threshold ------
        0.2   12.5   0.5       0.68   10.9   0.0    2.2  2  EphA2_TM   Ephrin type-A receptor 2 transmembrane domain
        1.9    8.6   5.0        4.3    7.4   5.0    1.6  1  SNARE      SNARE domain


Domain annotation for each model (and alignments):
>> Cellulase  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.5   2.4e-11   1.4e-07      22     250 ..     298     531 ..     282     551 .. 0.68
   2 ?   -1.8   0.5      0.29   1.7e+03     266     279 ..     601     614 ..     572     615 .. 0.71

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 2.4e-11
                 SHHHHHHHHHHHT-SEEEEEEE.CTGGTTSSTTTGCTHHHHHHHHHHHHHHHHTT-EEEEEEESS...............TTTCSSSSTTTTHHHHHHH CS
   Cellulase  22 ttkalidevkdagfntvRlpvs.wgelvenapdykvdenslerveevvkyakenglyvildiHse...............egwltkadgnssedtaeef 104
                   ++++  +++ag ++vR+p+s w   v +++ y v   s   +   +++a ++gl++ ld+H                  gwl+  +g+ +  ++ e 
  KHJ30534.1 298 VSEQTFIDIANAGLDHVRIPYSyWAVAVYDTDPY-VFRVSWRYLLRGIEWARRHGLRINLDLHALpgsqngwnhsgklgqIGWLNGTNGSLNMRRSLEI 395
                 5677888899***********9666666667777.555666777789*****************99999555555555554445555555555555555 PP

                 HHHHHHHHH.HHHTTTTTTEEEESSSS--STTCTCCTCHHHTTHHHHHHHHHHHHHHHHTTSSEEEEECHHHHTBHHHHHCTSGSSSSTTEEEEEEEET CS
   Cellulase 105 fkklwtqiA.erykkndevvifelmNEPhgnntgaewtseeadevkayaeeaikaIRavgpnrliivegnswsgnldgavlndPndsqdnliysvHfYg 202
                  ++l + +A +ry  ++ +  + l+NEP            ++++v ++ +e+ k +R  g + +i+ +  ++ g  + + + +  d ++ l+ + H+Y 
  KHJ30534.1 396 HDQLSKFFAqDRY--KNIICFYGLVNEPKMTVL-------DTNAVIEWTNEVSKLVRRNGIKAHIVFGD-GFMGIGNWKDKFY--D-NSGLVLDAHQYV 481
                 5554444441455..55677789*******544.......468999999*************7777666.3555444422224..3.588999999997 PP

                 TTHHHTGCGS.HSCTHHHHHHHHHHHHHHHHHHTTS.EEEEEEEESSTTS CS
   Cellulase 203 psdfaqtefg.kdltdktnlaqrledaakylvekgi.pviigEfGgsnad 250
                   +    + +  ++ +   ++++l++ ++   + g  p i  E+  +++d
  KHJ30534.1 482 IFNKDLISLShTKKIEYACDEWKLQAQQSMNPSTGFgPTIFAEWSQTDTD 531
                 44432222222345555566666666666667777777777777776665 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.29
                 HHTTTEEEEEEESS CS
   Cellulase 266 kekgiswiyWslnp 279
                  e+g +w+yW+++ 
  KHJ30534.1 601 FENGWGWFYWTWKT 614
                 478999****9975 PP

>> EphA2_TM  Ephrin type-A receptor 2 transmembrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.5       1.7     1e+04      32      36 ..      21      25 ..       5      64 .. 0.48
   2 ?   10.9   0.0   0.00011      0.68       7      67 ..     130     200 ..     125     209 .. 0.56

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.7
    EphA2_TM 32 qksdl 36
                +k+++
  KHJ30534.1 21 NKKRK 25
                11111 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00011
    EphA2_TM   7 aglvllvilvilvlvlvrrrsknrkqksdl..k.....skeekkeeensgk......k.glk.tYvDPhtYEDPnq 67 
                 +g++++++l+++++v++++++kn+ +  ++  +     +++++ +            + ++k tY DP+   D + 
  KHJ30534.1 130 LGIIIVILLITIATVVLSKKKKNHPSIINQvtTsdsgkPSNANLN-----NiaessiPmEAKdTYLDPFSWYDTTD 200
                 566777777777788887888887776665441334332222222.....12333343544449***998877665 PP

>> SNARE  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   5.0   0.00071       4.3      33      52 ..     121     140 ..     119     141 .. 0.92

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00071
                 TXXXXXXXXXXXXXXXXXXX CS
       SNARE  33 snRklkciillilviillvv 52 
                 + Rkl+ci l+i+++ill+ 
  KHJ30534.1 121 NKRKLLCIGLGIIIVILLIT 140
                 68****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (656 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1336  (0.0745161); expected 358.6 (0.02)
Passed bias filter:                      890  (0.0496402); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.74u 0.30s 00:00:01.04 Elapsed: 00:00:00.45
# Mc/sec: 4397.51
//
Query:       KHJ30535.1  [L=584]
Description: putative calnexin precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     1e-160  534.6  16.8   1.3e-160  534.2  16.8    1.1  1  Calreticulin  Calreticulin family
  ------ inclusion threshold ------
      0.011   16.6   0.1       0.76   10.6   0.0    2.7  2  DUF1911       Domain of unknown function (DUF1911)
      0.095   11.5   0.1        0.2   10.5   0.1    1.4  1  Baculo_gp64   Baculovirus gp64 envelope glycoprotein family


Domain annotation for each model (and alignments):
>> Calreticulin  Calreticulin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  534.2  16.8  2.2e-164  1.3e-160       1     367 []      62     432 ..      62     432 .. 0.99

  Alignments for each domain:
  == domain 1  score: 534.2 bits;  conditional E-value: 2.2e-164
  Calreticulin   1 fveqFeeeeelekrwikskakked.......eeakYkgkwsveepkklkglegdkgLvlkskakhhaisaklekpiklkkkdLvvqYevklqeglec 90 
                   fveqF e  ++++ w++s+akk++       ee++Y g++sveep  +kg+egdkgLvlk+ a+hhaisak++k+i+++ k+LvvqYevklq+glec
    KHJ30535.1  62 FVEQFLE--NWSDIWKPSHAKKDTkdsaksnEEWAYVGEFSVEEPIIFKGMEGDKGLVLKTPAAHHAISAKFPKKIDNTGKTLVVQYEVKLQNGLEC 156
                   7999997..9**********9988999**9999**************************************************************** PP

  Calreticulin  91 ggayikLlseeeekdleefsdktpytimFGpdkcgstnkvhfilrkknpktgeieekhlkkppklkkdklthLytLilkpdntfeiridgkvvksgn 187
                   ggay+kLl++++  ++eefs+ +py imFGpdkcgstnkvh+i+++knpktge+eekhlk+pp+++++k+t+LytLi+ p+nt  i+++g  v++ n
    KHJ30535.1 157 GGAYLKLLRDTKALHQEEFSNASPYVIMFGPDKCGSTNKVHLIINHKNPKTGEYEEKHLKSPPQARITKTTELYTLIIYPNNTGIIKLNGARVQQFN 253
                   ************************************************************************************************* PP

  Calreticulin 188 lledfeppvnppkeidDpedkkPedWddrekipDpeavkPedwdekapekipdpeavkPedWledepelipdpeaekPedwdeeedgeweaplikNp 284
                   lledf+pp++ppkeidDp+d+kP++W+d+++ipDpea+kPedwde+ap +i+d+ea kP+dWledep  ipdp+aekPedw +eedg+w+ap+i+Np
    KHJ30535.1 254 LLEDFDPPFTPPKEIDDPKDSKPDNWVDEQRIPDPEAKKPEDWDEDAPFEIVDEEASKPDDWLEDEPLNIPDPQAEKPEDWVDEEDGDWIAPTISNP 350
                   ************************************************************************************************* PP

  Calreticulin 285 kCeeasgCgkwkpplikNpkYkGkwkaplienpnYkGeWkprkipnpdyfedkkplkklepigaigfelwsmskdilfdniyi 367
                   kCe++sgCg+w++p+ikNp+YkGkw ap i+np+YkG Wkp+ki+np+yfedk+p ++l+p+gaigfelw+m+kdilfdni+i
    KHJ30535.1 351 KCEDVSGCGPWSKPMIKNPAYKGKWIAPYIDNPAYKGAWKPQKIKNPAYFEDKNP-SNLDPMGAIGFELWTMQKDILFDNIFI 432
                   *******************************************************.89***********************98 PP

>> DUF1911  Domain of unknown function (DUF1911)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00013      0.76      40      96 ..      55     115 ..      26     122 .. 0.79
   2 ?    2.9   0.1     0.031   1.9e+02       2      43 ..     423     466 ..     422     471 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00013
                 --SS-GGGGHHHHHHHTH....HHHTS-HHHHHHT----TTTTT--HHHHHHHHHH----H CS
     DUF1911  40 dkeeaskaLkkYlkeWYk....gakelawheahkereegayfGyWafEaaavakllglDds 96 
                 +++ +++ ++++l++W      ++ + + +++ k++ee ay+G +++E  ++ k ++ D+ 
  KHJ30535.1  55 PSTIKAEFVEQFLENWSDiwkpSHAKKDTKDSAKSNEEWAYVGEFSVEEPIIFKGMEGDKG 115
                 566778889999999988776778888888888888999*********9999887776665 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.031
                 --HHHHHHHHHHH...T-SS--S--S-HHHHGGGHHHH.HH--SS CS
     DUF1911   2 eDvLldfllasrq...ekreikeellhpkpyqkllevieeedkee 43 
                 +D+L+d ++  +     ++ + +++++++p +kl e+ + ++kee
  KHJ30535.1 423 KDILFDNIFIGHSvedADQFADDTFHEKSPHEKLSEIAQ-KEKEE 466
                 799999877555443344445556666789999*99995.55554 PP

>> Baculo_gp64  Baculovirus gp64 envelope glycoprotein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   3.3e-05       0.2     391     427 ..      61      97 ..      53     114 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 3.3e-05
                  --EEE-SS------------------GGGSHHHHHHH CS
  Baculo_gp64 391 epigidisnykelwipsiaevdyrdsvkdedGwsfvv 427
                  e +   + n++++w ps a+ d +ds k+++ w++v 
   KHJ30535.1  61 EFVEQFLENWSDIWKPSHAKKDTKDSAKSNEEWAYVG 97 
                  55666689**************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (584 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1012  (0.0564449); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 4198.41
//
Query:       KHJ30536.1  [L=242]
Description: putative methylthioribulose-1-phosphate dehydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-44  152.6   0.0    1.3e-44  152.4   0.0    1.1  1  Aldolase_II  Class II Aldolase and Adducin N-terminal domain
  ------ inclusion threshold ------
       0.13   12.1   0.0        0.3   10.9   0.0    1.5  1  PAN_3        PAN-like domain


Domain annotation for each model (and alignments):
>> Aldolase_II  Class II Aldolase and Adducin N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.4   0.0   1.4e-48   1.3e-44       3     185 ..      21     224 ..      19     225 .. 0.86

  Alignments for each domain:
  == domain 1  score: 152.4 bits;  conditional E-value: 1.4e-48
                  HHHHHHHHHHTTSSCTTBCEEEEEETSTTEEEEEBTSS-GGGHTGGGEEEEETTSCEEEEC.......ECSSSTB-TTHHHHHHHHHH-TT-SEEEEE CS
  Aldolase_II   3 laeasrllarrglvegtgGniSvrvpeedsflitpsgvdfeeltaedlvvvdldsgevveg.......kekggkpssetplHlaiykarpdaravvHt 93 
                  + e++r+++++g+v+gtgG  S+r   +d ++ +psgv++e +++e+++v+++   ++++        + +++kps++tpl++a++k+r +a++++Ht
   KHJ30536.1  21 IPELCRKFWTLGWVTGTGGGASIRK--DDLVYLAPSGVQKELMRPENIYVLEMS--KQIDPkkriylrSPQNLKPSQCTPLFMAAFKKR-NAGCCIHT 113
                  789*********************4..57888*******************986..4454445677787789***************85.******** PP

                  --HHHHHHHTCC.............STSCHCC..SSHHHHC.HSS...SEEEEES-SSTTCHHHHHHHHHHHHH..S-SEEEETTTEEEEEESSHHHH CS
  Aldolase_II  94 Hspaavalsala.............gkeglpp..ltqeaaklllg...devpvipyaapgteelgealaealke..dakavllrnHGlltvGetleeA 171
                  Hs++av++++l+             ++e++++    ++ + +l++    +vpvi++++++++++ e l++a+++  d+ avl+r+HGl+++Get+ +A
   KHJ30536.1 114 HSQWAVLITLLLerrtenckvfeinNIEQIKAfgRGWQKQGALGYhdtLRVPVIENTPFEEDLT-EYLESAMDDfpDTYAVLVRRHGLYVWGETVNKA 210
                  *********77799999999998885566666664444444344477999********997777.*******955699******************** PP

                  HHHHHHHHHHHHHH CS
  Aldolase_II 172 valaetleeaaeiq 185
                  +++ae l+++++++
   KHJ30536.1 211 KQQAESLDYLFQLA 224
                  ***********987 PP

>> PAN_3  PAN-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   3.3e-05       0.3      41      67 ..     128     154 ..     120     156 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 3.3e-05
       PAN_3  41 nsenCtlfeignvstvkkiesssekkv 67 
                 ++enC++fei+n++++k   ++ +k+ 
  KHJ30536.1 128 RTENCKVFEINNIEQIKAFGRGWQKQG 154
                 489*************98777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       439  (0.0244855); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1898.54
//
Query:       KHJ30537.1  [L=456]
Description: putative tubulin alpha chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-64  218.2   0.0    1.6e-64  217.8   0.0    1.2  1  Tubulin    Tubulin/FtsZ family, GTPase domain
    1.3e-42  145.0   0.0    1.9e-42  144.4   0.0    1.3  1  Tubulin_C  Tubulin C-terminal domain
     0.0038   16.9   0.0     0.0068   16.1   0.0    1.4  1  Tubulin_3  Tubulin domain


Domain annotation for each model (and alignments):
>> Tubulin  Tubulin/FtsZ family, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.8   0.0   2.6e-68   1.6e-64       1     196 [.       5     215 ..       5     216 .. 0.99

  Alignments for each domain:
  == domain 1  score: 217.8 bits;  conditional E-value: 2.6e-68
                 EEEEEEEHHHHHHHHHHHHH...HHHCH................HHHT.....TTEEEEE....EEESBHHHHHTS-GS........EEEE--CCCCTT CS
     Tubulin   1 eiivigvGqcGnqignelwellakehgiqsdg............dslesfFsesgkveyiprsvaidtdpqvlneikags..elfnpnklllgkegagn 85 
                 ei+++++Gq+G q+gn++wel++ ehg+++dg             +l+++F+e+g+++y+prs+++d+dp+ ++ei++g   +lf+p+ l++gke+a+n
  KHJ30537.1   5 EILHLHIGQGGTQLGNSAWELYLLEHGLNKDGrpnpdakelhdsGELDTVFTETGSGKYVPRSLFVDLDPSPIDEIRTGDyrQLFHPELLISGKEDAAN 103
                 79***************************999***********999***************************************************** PP

                 C--TT-HHHHHHHHHHTHHHHHHHHTT-SE.SEEEEEEETTSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE--.GG.G-HHHHHHHHHHHHHHHHT-SE CS
     Tubulin  86 ngaggypevgkeaaeeileeirkevekcdslqgffitaslgGGTGSGlgpvilevlkeeypkalvvtvvvlPs.efsevvvepynailalkelieesda 183
                 n+a+g++++gke+ +  l++ir+ +++c slqgf+i++s+gGGTGSG+g+++le+l+ +y k+ ++ + v+P  + s+ vvepyna+l++++ ie+sd+
  KHJ30537.1 104 NYARGHYTIGKEILDGTLDKIRRVLDNCSSLQGFLIFHSFGGGTGSGFGSLLLERLSADYGKKSKLEFAVYPApRVSTAVVEPYNAVLSTHSTIENSDC 202
                 *************************************************************************************************** PP

                 EEEEEHHHHHCCS CS
     Tubulin 184 vividNdaLlkil 196
                 ++++dN+a ++i+
  KHJ30537.1 203 TFLVDNEAVYDIC 215
                 ************9 PP

>> Tubulin_C  Tubulin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.4   0.0   3.2e-46   1.9e-42       1     125 [.     265     399 ..     265     400 .. 0.99

  Alignments for each domain:
  == domain 1  score: 144.4 bits;  conditional E-value: 3.2e-46
                 TTC-EEEEEEESSSCTTTTTCS-HHHHHHHHHTCSGGGBSSSTSTTTSSEEEEEEEEEESSSHHHHHHHHHHHHHTTTS-BSTTSTTTEEEEEEECECT CS
   Tubulin_C   1 PrlhFlltsyaPlvsaekaavektsvqdvtrallepknimvkvdprkgkylaiallirGdvepkevnkavqrikekkkaqfveWiptgikvalnkkspy 99 
                 Pr+h++l+syaP++sa+++++e+ + +d+t +++ep+n+mv +dpr gky+a+all+rGdv+p+++n+av+++k+k + ++veW+ptg+k ++n+++p+
  KHJ30537.1 265 PRIHYPLISYAPVISASRSSHESFKTHDLTLQCFEPHNQMVVCDPRAGKYMAVALLYRGDVVPRDCNAAVASLKAKPSFNLVEWCPTGFKLGINYQKPV 363
                 9************************************************************************************************** PP

                 -TTTS..........SCEEEEEEEEGGGHHHHHHHH CS
   Tubulin_C 100 vkkqs..........kvsvlmlaNttsiaelfkrll 125
                  +++           ++sv ml+Ntt+iae+++rl+
  KHJ30537.1 364 SVPSTspddgalasvDRSVSMLSNTTAIAEAWSRLD 399
                 *99999****************************97 PP

>> Tubulin_3  Tubulin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.1e-06    0.0068      63     108 ..     123     169 ..      83     217 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.1e-06
   Tubulin_3  63 dlrpfaeecdqlrglqvftgvddaWG.Gfaakylerlrdeygkksil 108
                  +r  +++c +l+g+ +f +     G Gf++  lerl  +ygkks l
  KHJ30537.1 123 KIRRVLDNCSSLQGFLIFHSFGGGTGsGFGSLLLERLSADYGKKSKL 169
                 379999**************99887769****************954 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       312  (0.017402); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 3692.16
//
Query:       KHJ30538.1  [L=662]
Description: putative ccch zinc finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.038   14.0   6.7      0.067   13.3   6.7    1.4  1  zf_CCCH_4   Zinc finger domain
       0.19   11.7   6.4       0.34   10.9   6.4    1.4  1  zf-CCCH     Zinc finger C-x8-C-x5-C-x3-H type (and similar)
        0.2   11.4  28.2       0.81    9.4   6.4    2.3  2  Cwf_Cwc_15  Cwf15/Cwc15 cell cycle control protein
        1.1    8.6   4.9        1.9    7.7   4.9    1.5  1  DUF4407     Domain of unknown function (DUF4407)
        5.9    6.9   9.5         40    4.2   6.8    2.2  2  DUF1640     Protein of unknown function (DUF1640)


Domain annotation for each model (and alignments):
>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   6.7   1.9e-05     0.067       1      19 []     557     576 ..     557     576 .. 0.99

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.9e-05
   zf_CCCH_4   1 Ckfflq.GtCkkGdkCrFaH 19 
                 Ck+f + GtC k  kCrF H
  KHJ30538.1 557 CKYFSTgGTCGKKGKCRFVH 576
                 *******************9 PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   6.4   9.5e-05      0.34       6      27 .]     557     578 ..     554     578 .. 0.94

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 9.5e-05
                 BCHHHHHS--TTGGG-SSBSCS CS
     zf-CCCH   6 CrffmrtGyCkyGdrCkFaHgq 27 
                 C++f+ +G+C   ++C+F H+q
  KHJ30538.1 557 CKYFSTGGTCGKKGKCRFVHDQ 578
                 ********************86 PP

>> Cwf_Cwc_15  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   6.4   0.00022      0.81      81     150 ..     324     395 ..     293     399 .. 0.57
   2 ?    7.6  13.8    0.0008       2.9      34     147 ..     431     534 ..     405     545 .. 0.42

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00022
                 ---------------------------..-----------------....------------------------ CS
  Cwf_Cwc_15  81 eekekkeeeeeeeeeeakrrkeelleeareidaddedseeeeeeee....eesdddsdsdsdddddedetaeLl 150
                 ++++++++e++++++  ++++++ +++  ++ ad+  +++++++++    + +d ++++++dd dd de+a L+
  KHJ30538.1 324 QSQSRNRNESRYHQNGGQKSSSDSYQK--SVTADSTGKKKKKRKTNtlglTPNDIEHEDSDDDVDDVDEEARLV 395
                 133333444444444444444445544..677777766665555556787566667777777777789999986 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0008
                 -------TTT--HHHHHHS-HHHHHHHHHHHHHHHHH-------------------------------------..-----------------...... CS
  Cwf_Cwc_15  34 tkLKfRqegqgteeelekrdlraeLeeaeaeakakkrkkaeleaeeeeekekkeeeeeeeeeeakrrkeelleeareidaddedseeeeeeee...... 126
                  +L++R++ q  e + +k++++ + ee e++ ++k +++++le+               ++++a++ + el + +r+i ++ + s++++ + +      
  KHJ30538.1 431 EQLRLRRA-QAYEGKIKKEEVKIKKEEGEEKFSKKIEGETKLEK---------------QQRKAEKLRLELEKAERKIQEEISGSKRKRGNGDegdadc 513
                 33333322.22223333333333333333333333333222222...............2222222222222222344444444433333333333444 PP

                 .--------------------- CS
  Cwf_Cwc_15 127 .eesdddsdsdsdddddedeta 147
                  + sd+dsds+ ++d+ +d  +
  KHJ30538.1 514 gQVSDNDSDSSASSDS-DDKPE 534
                 3444445555555554.34434 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   4.9   0.00054       1.9     131     188 ..     441     520 ..     406     608 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00054
     DUF4407 131 ltaelaeleaqia...................alqaeidaaearldalraeaqkeldgtk...gtgttgvaGkgpaakek 188
                 ++ +++++e +i+                   + q++ ++++ +l++++++ q+e++g k   g+g +g+a  g++ ++ 
  KHJ30538.1 441 YEGKIKKEEVKIKkeegeekfskkiegetkleKQQRKAEKLRLELEKAERKIQEEISGSKrkrGNGDEGDADCGQVSDND 520
                 4455555554444555555555555555555589999999999**************98877777777777777777763 PP

>> DUF1640  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.026        95      89     126 ..     301     338 ..     292     357 .. 0.84
   2 ?    4.2   6.8     0.011        40      41     103 ..     438     500 ..     416     503 .. 0.72

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.026
     DUF1640  89 eklkqkLreeidklkadirldlnleKgrireelaklea 126
                  +l +k++   ++ + + r d+n+  +r r+e+ ++++
  KHJ30538.1 301 YHLSNKVKGGSSNFRGKSRGDFNQSQSRNRNESRYHQN 338
                 568888888899999999***************99987 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.011
     DUF1640  41 slvskselekseylqkaalselrkevqisersefaalrseteklqreleklkqkLreeidklk 103
                   +   +++k+e+++k +  e +   +i  +++ ++ +++ ekl+ elek + k++eei+  k
  KHJ30538.1 438 AQAYEGKIKKEEVKIKKEEGEEKFSKKIEGETKLEKQQRKAEKLRLELEKAERKIQEEISGSK 500
                 44455566666666666666666666777788889999********************98655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (662 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1894  (0.105639); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.73u 0.29s 00:00:01.02 Elapsed: 00:00:00.44
# Mc/sec: 4563.86
//
Query:       KHJ30539.1  [L=183]
Description: putative mbr family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.1e-46  155.6   3.3    8.8e-46  155.3   3.3    1.1  1  TspO_MBR     TspO/MBR family
  ------ inclusion threshold ------
      0.058   14.0   0.0       0.12   13.1   0.0    1.6  1  CRISPR_Cas6  CRISPR-associated endoribonuclease Cas6


Domain annotation for each model (and alignments):
>> TspO_MBR  TspO/MBR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.3   3.3   9.8e-50   8.8e-46       2     133 ..      21     171 ..      20     173 .. 0.95

  Alignments for each domain:
  == domain 1  score: 155.3 bits;  conditional E-value: 9.8e-50
                 HHHHHHHHHHHHHH.HHHCCH.HHHHHS---TTS--HHHHTTHHHHHHHHHHHHHHHHHHH.................HHHHHHHHHHHHTSGGCTTTT CS
    TspO_MBR   2 alalpllvgllggl.ftksee.ewykslrkPpwaPpdwvfppvWtvlyilmgvaaylvwka.................lalyavqlvlnllwsplffgl 81 
                 ++++p+lvg+ +g+ + ++e+ + y +l++Pp++Pp+ +f+p Wt+ly+lmg+aa++++++                  +ly++ql+ln+lw+plffgl
  KHJ30539.1  21 SIFFPVLVGAGIGYsLRPKETqKTYMKLKQPPYRPPPSIFGPTWTILYGLMGYAAHRAYRTgmsplastnqyhltkqgATLYTIQLGLNFLWMPLFFGL 119
                 57899*********6666777888*************************************************9999966******************* PP

                 TSGGGHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHCHHHHHHHHHHHHHHHH CS
    TspO_MBR  82 kspvlalvdivallglvvalilafskvdklaallllpyllWllfatylnasi 133
                 ++p+ +++di+al g+v +l + +s+vd++a+lll py++Wl+fa+yl++++
  KHJ30539.1 120 RRPIESAIDIIALSGTVGYLSYVWSRVDPVASLLLTPYCAWLAFASYLTVGV 171
                 *************************************************987 PP

>> CRISPR_Cas6  CRISPR-associated endoribonuclease Cas6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.3e-05      0.12      48      78 ..     107     172 ..      33     176 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.3e-05
                  H..........................EEEEEEEE--HHHECCC...........HHHHHHHH-SSST CS
  CRISPR_Cas6  48 g..........................GfvGevkysgeleelek...........llrfaeylgvGkk 78 
                  g                          G vG+++y  +++++ +           +l+fa+yl vG +
   KHJ30539.1 107 GlnflwmplffglrrpiesaidiialsGTVGYLSY--VWSRVDPvasllltpycaWLAFASYLTVGVG 172
                  13333333334444444444555555599999999..444444455577789999**********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       325  (0.0181271); expected 358.6 (0.02)
Passed bias filter:                      233  (0.0129957); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1397.92
//
Query:       KHJ30540.1  [L=877]
Description: putative arsenite resistance protein ars2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-30  105.6   4.5    1.6e-30  105.6   4.5    2.3  2  DUF3546          Domain of unknown function (DUF3546)
    3.4e-12   45.9   0.1    7.8e-12   44.8   0.1    1.6  1  DUF4187          Domain of unknown function (DUF4187)
      1e-09   39.1   2.0    1.2e-09   38.9   0.1    2.0  2  ARS2             Arsenite-resistance protein 2
  ------ inclusion threshold ------
          3    8.0   7.4        4.5    7.5   1.1    2.8  3  PEP-utilisers_N  PEP-utilising enzyme, N-terminal


Domain annotation for each model (and alignments):
>> DUF3546  Domain of unknown function (DUF3546)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.6   4.5   3.5e-34   1.6e-30       5     109 ..     169     273 ..     166     274 .. 0.97
   2 ?   -3.1   0.5         2     9e+03      51      74 ..     688     713 ..     671     719 .. 0.55

  Alignments for each domain:
  == domain 1  score: 105.6 bits;  conditional E-value: 3.5e-34
     DUF3546   5 esqe.deiekeeaqkkYdeYkeefqkkqleeFfeaHkdeeWfrekYhPeelakrkeelrellkkrlevFlellesgvfdevsleadnskeevklldavv 102
                 e+qe +++ek+++q++Yd Yk+e+q+k++++F+++Hk e+Wf+e+Y  e ++ ++ +l+e+++ ++++++++lesg+fde++le +++k+e++++++v+
  KHJ30540.1 169 ETQEdRDKEKSKIQAAYDVYKQELQAKMARAFVQEHKGEQWFQERYLSEPRNFLRTQLNEFRRGNYNQWEQDLESGTFDEFTLE-GIPKSESNGAGGVI 266
                 677779******************************************************************************.************** PP

     DUF3546 103 ikeeggt 109
                 +keeg+t
  KHJ30540.1 267 EKEEGET 273
                 *****98 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2
     DUF3546  51 Peelakrkeel..rellkkrlevFle 74 
                 Pe l+ +kee+  r+ + kr +++le
  KHJ30540.1 688 PECLKLFKEEHfwRKHVDKRHSEWLE 713
                 44444444443334555555555555 PP

>> DUF4187  Domain of unknown function (DUF4187)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.1   1.7e-15   7.8e-12       1      48 [.     521     568 ..     521     572 .. 0.95

  Alignments for each domain:
  == domain 1  score: 44.8 bits;  conditional E-value: 1.7e-15
     DUF4187   1 eeleefeeleaeerLeklleyLReeylYCfwCgtkYedeedLeenCPG 48 
                 ee ++++ l ++++L++++eyLR+ +++Cf+C ++ ++ ++L+++CPG
  KHJ30540.1 521 EEIDDEDLLVKKKQLDLMVEYLRRVFSFCFFCVFESDSVHELTRKCPG 568
                 578899999*************************************** PP

>> ARS2  Arsenite-resistance protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.4       0.9     4e+03      31      54 ..     146     170 ..     138     183 .. 0.73
   2 !   38.9   0.1   2.6e-13   1.2e-09      11     119 ..     630     736 ..     620     811 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.9
        ARS2  31 eketlsee.eilklgkkdpekevEk 54 
                 ++e ++ee e+++ gk+ + + +E+
  KHJ30540.1 146 TNERIKEEkEAARTGKRRDTRRIET 170
                 55566544399********999997 PP

  == domain 2  score: 38.9 bits;  conditional E-value: 2.6e-13
        ARS2  11 saevnewqkkfeekleellseketlseeeilklgkkdpekevEkfvqantqElakdKwlCplsG..KkFkgpEFvrKHilnKHaekveevrkevefFnn 107
                  + + +w k+feek++++l +  ++   +i+klg k  ++++   +++  +    +K+ C +    K+Fk   F rKH+ ++H+e +e ++++ e  n 
  KHJ30540.1 630 LQRAFNWVKTFEEKITQILDPD-SI---DIQKLGGKPIDDAIKDELTKYVKQEDEHKFRCRVPEclKLFKEEHFWRKHVDKRHSEWLEGIKRDFELINI 724
                 455789*************985.56...8********9****9999999999999*****887667********************************* PP

        ARS2 108 ylldakrPalpe 119
                 y+ld+ + a   
  KHJ30540.1 725 YVLDPAHIAPSR 736
                 ****98644333 PP

>> PEP-utilisers_N  PEP-utilising enzyme, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   1.1     0.001       4.5      21      58 ..     166     204 ..     154     225 .. 0.79
   2 ?    3.0   0.3     0.024   1.1e+02      15      54 ..     477     515 ..     467     535 .. 0.77
   3 ?   -2.5   0.0       1.3   5.8e+03       5      41 ..     585     635 ..     581     649 .. 0.41

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.001
                      ----G.GGHHHHHHHHHHHHHHHHHHHHHHHHHH.T-HH CS
  PEP-utilisers_N  21 eeeveaedveaelerleeAlekvreelealaeka.lgee 58 
                      ++  ++ed ++e +++++A++  ++el+a  ++a ++e+
       KHJ30540.1 166 RRIETQEDRDKEKSKIQAAYDVYKQELQAKMARAfVQEH 204
                      55667899*********************7777774443 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.024
                      E---.-----G.GGHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  PEP-utilisers_N  15 veveveeeeveaedveaelerleeAlekvreelealaeka 54 
                      + ++v+  ++++e++ +   rl+eA++++ e +e+  e+ 
       KHJ30540.1 477 H-LPVTTPKIKKEKTSSDFLRLDEAIDEADEPVEDTDEEE 515
                      5.4667788999999999*************999976554 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.3
                      EE-SEEEEEEE..............---.-----G.GGHHHHHHHHHHHHH CS
  PEP-utilisers_N   5 aspGiaiGkav..............eveveeeeveaedveaelerleeAle 41 
                      a+   a+G+ +              +++ + ++++ +   +  ++l++A++
       KHJ30540.1 585 AAIASALGEPFpgkkrtysdvddepTTPEPDRKIQRNILPKTEQQLQRAFN 635
                      444445555556665544433332211112222222222222234444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (877 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       866  (0.0483016); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.29s 00:00:00.99 Elapsed: 00:00:00.45
# Mc/sec: 5919.19
//
Query:       KHJ30541.1  [L=301]
Description: putative amino-acid transporter arg-13 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-52  175.7   0.1    7.9e-19   67.4   0.0    3.1  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.0   0.0     1e-16   1.8e-12       6      86 ..       4      89 ..       1      99 [. 0.82
   2 !   57.9   0.0   3.9e-20   7.1e-16       3      93 ..     108     195 ..     106     199 .. 0.91
   3 !   67.4   0.0   4.4e-23   7.9e-19       3      92 ..     208     294 ..     207     298 .. 0.95

  Alignments for each domain:
  == domain 1  score: 47.0 bits;  conditional E-value: 1e-16
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHG......GGTTHHHHHHHHHHHHHHHHHHH CS
   Mito_carr  6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrg......lyrGllpnllrvapasalkfvly 86
                l++++ G++agav++ + +P+d++K+rlq+q+++    +s+  ld+l+k +k+   +       lyrG++  ++  + +++  f+  
  KHJ30541.1  4 LEDIVFGSVAGAVSKYFEYPFDTIKVRLQSQPDRLPPLYSG-PLDCLRKSIKSTSGSTitkllsLYRGVSTPVVSAVFENSSLFFWE 89
                68899*****************************9887665.*********8653222244444************99999998765 PP

  == domain 2  score: 57.9 bits;  conditional E-value: 3.9e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 l++ + +l+G++aga+++++ tP+++vK+r+q+   + ++      + +++ i+ + G++g++rG   +l+r +  sa++f++ e++ +l+
  KHJ30541.1 108 LPLPALWLTGATAGAATSFILTPFELVKCRIQAPICRRTDYS---PFAIIGDIWSHGGIMGFWRGQASTLIRESLGSAAWFGSKESVSTLF 195
                 56777899************************9777766644...899***************************************9998 PP

  == domain 3  score: 67.4 bits;  conditional E-value: 4.4e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrl 92 
                 l+++++++aG+ ag+   l+ +P d++K r+qt++    k+    i++  k +++++Gl+g yrG++++++r+ap+sal f +++ +k +
  KHJ30541.1 208 LPLYQQVIAGASAGMSYNLISFPADTIKSRMQTSGLGVDKKS---IWSETKAVWRHHGLKGYYRGCGITVMRSAPSSALIFCIFDGMKVH 294
                 67899*******************************998866...*****************************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       265  (0.0147805); expected 358.6 (0.02)
Passed bias filter:                      249  (0.0138881); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2196.87
//
Query:       KHJ30542.1  [L=139]
Description: hypothetical protein EV44_g4290 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1054.47
//
Query:       KHJ30543.1  [L=246]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.36
# Mc/sec: 2038.17
//
Query:       KHJ30544.1  [L=388]
Description: putative fatty acid hydroxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.8e-17   61.4   0.8    1.9e-16   60.0   0.0    1.9  2  Cyt-b5           Cytochrome b5-like Heme/Steroid binding doma
      3e-13   50.3  18.1      3e-13   50.3  18.1    1.8  2  FA_hydroxylase   Fatty acid hydroxylase superfamily
  ------ inclusion threshold ------
      0.012   15.8   0.0      0.028   14.6   0.0    1.6  1  Anth_synt_I_N    Anthranilate synthase component I, N termina
      0.084   13.0   0.2       0.17   12.0   0.2    1.5  1  Phage_holin_3_3  LydA holin phage, holin superfamily III
       0.35   11.2   6.1          2    8.8   0.7    2.3  2  ATP-synt_I       ATP synthase I chain


Domain annotation for each model (and alignments):
>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   0.0   5.3e-20   1.9e-16       3      71 ..      13      83 ..      12      86 .. 0.91
   2 ?   -1.6   0.1      0.89   3.2e+03      23      32 ..     330     339 ..     326     343 .. 0.84

  Alignments for each domain:
  == domain 1  score: 60.0 bits;  conditional E-value: 5.3e-20
                HHHTTTECTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTT...GGCHHHHHHHHGGEEE CS
      Cyt-b5  3 eelskhngkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvv...hsekdaekllkkylvG 71
                +e++ hn++++++v +  kVYDv++f++ hpGg+++il+yaGkD+t ++k+     hse+ a + l++ lvG
  KHJ30544.1 13 DEIAGHNNSKSCFVLMGTKVYDVTDFINSHPGGGDLILEYAGKDVTSILKNENshtHSEA-AYDVLEESLVG 83
                68999********************************************99888878777.78888988888 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.89
                 EECTTTCCCS CS
      Cyt-b5  23 YDvskflskh 32 
                 YD++++  +h
  KHJ30544.1 330 YDLTHYFLHH 339
                 9***999888 PP

>> FA_hydroxylase  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.2   4.3e+03      42      66 ..     190     211 ..     169     226 .. 0.46
   2 !   50.3  18.1   8.3e-17     3e-13       2     133 .]     236     378 ..     235     378 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.2
  FA_hydroxylase  42 laalrahplealllallllllllll 66 
                     l +     le l  ++++++++++l
      KHJ30544.1 190 LFGNF---LEPLSKTVWWVVPMVWL 211
                     33333...33333333333333333 PP

  == domain 2  score: 50.3 bits;  conditional E-value: 8.3e-17
  FA_hydroxylase   2 llallledfveYwvHr.llHrvk........l.lwrrlHkvHHsseaptalaalrahpleallla.llllllllllg..plsalll.vlvlaall 82 
                     l++++++++veY++Hr l+H  +        l l+  lH +HH +  ++ l  +    l  +l++ ++ l+ +l++   ++ + ++ + ++++++
      KHJ30544.1 236 LIGIFIWTLVEYFLHRfLFHLDRflpenrvaLtLHFLLHGIHH-YLPMDKLRLVMPPALFLVLATpFWKLAHVLIYWnwSIATTVFcGGIFGYIC 329
                     6899****************85555556655379999******.666777666666566666666344444444444455555555799****** PP

  FA_hydroxylase  83 elliHsglhvslgwllerllatpraHrlHHskneegnfgvllslwDrlfgT 133
                     + l+H+ lh+++ +   +++  +++H  HH+ + e  fgv++++wD++fgT
      KHJ30544.1 330 YDLTHYFLHHRTLP--LYWRELKKYHLQHHFMDYENGFGVTSRFWDVVFGT 378
                     *******5444444..489***************9***************9 PP

>> Anth_synt_I_N  Anthranilate synthase component I, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   7.8e-06     0.028      89     107 ..     319     337 ..     304     354 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 7.8e-06
  Anth_synt_I_N  89 pfvgGlvGylgYDlvreie 107
                     f+gG++Gy+ YDl++++ 
     KHJ30544.1 319 VFCGGIFGYICYDLTHYFL 337
                    5***************996 PP

>> Phage_holin_3_3  LydA holin phage, holin superfamily III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.2   4.7e-05      0.17      48      74 ..     307     333 ..     304     337 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.7e-05
  Phage_holin_3_3  48 lceelglsqlltlaiaglsGylGaral 74 
                      +++++++s  +t+++ g++Gy+  +++
       KHJ30544.1 307 VLIYWNWSIATTVFCGGIFGYICYDLT 333
                      689******************866655 PP

>> ATP-synt_I  ATP synthase I chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.5    0.0084        30       2      60 ..     208     264 ..     204     274 .. 0.81
   2 ?    8.8   0.7   0.00057         2      20      50 ..     305     338 ..     286     345 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0084
  ATP-synt_I   2 ivliqlvllavlalgwlltgsasvalsallGglisvlpfalfalrvfrfsgalarkkkk 60 
                 +v++ +v+  + ++  +l++ a+ +l  l+G +i +l  +++++++f + + l +  ++
  KHJ30544.1 208 MVWLPFVIYGLYIARPGLSSTAEEFLYCLIGIFIWTLVEYFLHRFLFHLDRFLPE--NR 264
                 5666677777777777778888899999*******************99998888..33 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00057
  ATP-synt_I  20 t.....gsasvalsallGglisvlpfalfalrvfrf 50 
                 +     +++s+a  +++Gg+++ +++ l+++++  +
  KHJ30544.1 305 AhvliyWNWSIATTVFCGGIFGYICYDLTHYFL--H 338
                 34444489***********************99..4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 3141.81
//
Query:       KHJ30545.1  [L=199]
Description: putative mitochondrial iron uptake protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.3e-37  126.9   0.0    4.7e-37  126.4   0.0    1.2  1  Frataxin_Cyay  Frataxin-like domain


Domain annotation for each model (and alignments):
>> Frataxin_Cyay  Frataxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.4   0.0   2.6e-41   4.7e-37       2     104 ..      87     197 ..      86     199 .] 0.94

  Alignments for each domain:
  == domain 1  score: 126.4 bits;  conditional E-value: 2.6e-41
                    HHHHHHHHHHHHHHHHHHHH.HHHHH--CTS.SEEEETTEEEEEETTS-EEEEEEEGGGTEEEEEES.SEEEEEEEET...........TEEEETT CS
  Frataxin_Cyay   2 sdeeyhkladelldsleekleelaeeaeedeldveyssgvLtiefekkgtyvinkqppnkqIWlsspisgpkrfdyde..........kgeWiskr 87 
                    s e+yh+lad +l +leek++el+++ +e  +dve+s+gvLt++++ kgtyv+nkqppnkqIWl+spisgpkr+dy++          +geW++ r
     KHJ30545.1  87 SVEQYHALADTYLSDLEEKFNELQDK-DEL-IDVEFSAGVLTLTLPPKGTYVLNKQPPNKQIWLASPISGPKRYDYVHfakddkhgaaSGEWVYLR 180
                    678***********************.455.5********************************************************99****** PP

                    TT-BHHHHHHHHHHHHH CS
  Frataxin_Cyay  88 dgseLkelLeeelskal 104
                    dgs+L +lL ee++ ++
     KHJ30545.1 181 DGSTLSNLLMEECQINM 197
                    ************98665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       727  (0.0405488); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.36
# Mc/sec: 1672.72
//
Query:       KHJ30546.1  [L=1137]
Description: putative leucyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-33  116.0   0.0    1.2e-23   83.3   0.0    2.8  2  tRNA-synt_1   tRNA synthetases class I (I, L, M and V)
    1.1e-16   60.6   0.1      1e-09   37.6   0.0    2.2  2  tRNA-synt_1g  tRNA synthetases class I (M)
    2.7e-09   37.2   2.6    1.2e-08   35.0   2.5    2.1  1  Anticodon_1   Anticodon-binding domain of tRNA
    4.5e-07   29.5   0.0    8.5e-07   28.6   0.0    1.3  1  tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.0   5.1e-11   2.3e-07      22      84 ..      72     134 ..      64     172 .. 0.82
   2 !   83.3   0.0   2.6e-27   1.2e-23     106     601 ..     211     795 ..     190     796 .. 0.79

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 5.1e-11
  tRNA-synt_1  22 kkefilvdgPPyvtGslHiGhalaktlkdivirykrmkGkevlyvpGwDhaGlaieakvekkl 84 
                   ++f  +   Py +G+lH Gh+++ +  ++ + ++rm+Gk++l+ +G+ + G++i+a  +k  
   KHJ30546.1  72 YPKFYGTMAYPYMNGTLHAGHSFTVSKIEFAVGFARMQGKRSLFPMGFHCTGMPIKASADKLA 134
                  5677778888**********************************************9988753 PP

  == domain 2  score: 83.3 bits;  conditional E-value: 2.6e-27
  tRNA-synt_1 106 ewkaeyaeeirkqvkrlGvsvDfdreylTldke..leeavkevfvrladkgliyrgkklvnwstklktalselEveykdkkdalihvafpl....... 194
                  +w +++    +++++++G ++D+ r  +T d +  + + v++ + rl +   i  gk+   +s+k   +  + +    +  ++  + a +l       
   KHJ30546.1 211 HWLDYFPPLCQRDLTNFGSRIDWRRSMVTTDANpfYDAFVRWQMNRLKELKKIKFGKRYTIYSPKDGQPCMDHDRSEGEAVGPQEYTALKLkvldwap 308
                  56677777789999***************997654788899*****************************9999988888866666666555566666 PP

  tRNA-synt_1 195 ..........adkeevklviaTTtPeTllgdtavavnpeldyv....itkeklilaeallkslvkke..sek...kiledergkeLegkevelpl..v 271
                             +++++++v aT +PeT+ g+t   v p++ y+     +ke +i+ e   ++++ +    e+   + + +  g+  +g  v+ pl  +
   KHJ30546.1 309 eakkiiegkiPEDADTYFVPATLRPETMYGQTCCFVGPNIIYGifrlSSKEFFIVTERAARNMAYQGifPENgvyEKVGELIGTTCVGTLVHAPLslH 406
                  5555555544666669***************************9998899999999999999877764444433455566778888888888887778 PP

  tRNA-synt_1 272 nrkipiiaddyvdkeaGtGvVkiaPahdedDyev....gkkynl.........evinildedgtlteea............................. 327
                  +  ++i+  + v + +GtGvV   P   +dD+++    +kk +            i ++    t+ + +                             
   KHJ30546.1 407 KDGVRILPMESVLSTKGTGVVTSVPSDSPDDFATvtdlCKKAEYygikkewveLEILPIIRTPTYGDRTaeylvkkfkilspkdtkkleeakelayke 504
                  899*****************************742333777555666988887455566666666666568899************************ PP

  tRNA-synt_1 328 .........aefeglkvfdarkkvveelkekglllkaekiehsvpfcerskkpiiyrateqWfvrvke..ladaalkave.....kvqfvpkskekry 409
                           ++++g kv+ a+ kv ++l + g  +  ++ e +v   +rs++   + + +qW++   e   ++ al++v       ++   + +++  
   KHJ30546.1 505 gyyqgimlrGDYAGEKVEVAKPKVKQQLIASGEGFAYSEPERKV--VSRSGDECCVALMDQWYIDYGEesWKQIALRHVGntdgaGMNTFAQETKNGL 600
                  ********************************999988888876..68****************9877665555666555444777888888899999 PP

  tRNA-synt_1 410 aswleniqdWciSRqrwWGhriplfvsketeevvvreelkelvagreeeeaekkalekeakdkl.kkekgelekdedvlDvWFsSgswpfstl.gype 505
                  +  l+  ++W+  R+   G ++p +  +   e    +++ +++  + ++  ++  + k+    l + + +  +  ++v+D  F     + s+l ++  
   KHJ30546.1 601 EGTLNWLNQWACARSYGLGSKLP-WDPQFLVESLS-DSTIYMAYYTIAHYLHSDIFGKSPG--LaNIKPD--QMTDEVFDYIFARRDLTESILlESKI 692
                  9999999***************9.55555554444.3444444433333333333333333..2123333..44679******877666666523222 PP

  tRNA-synt_1 506 e......dteelkkffpadmlleGlDiirgWvarlillslaltgsePf.kevlvhglvrdeeGrKmSKslgNvidpldvikkygadalRltli.lsdv 595
                  +       ++e++  +p d+ ++G D i   ++  + + la++ +e + + +  +g ++  +G Km Ks gN +  +d++kkygada R +l+   d 
   KHJ30546.1 693 KeevlasMRREFEYWYPLDVRISGKDLIPNHLTFFLYIHLAIFPKEYWpRGIRANGHLL-LNGEKMAKSTGNFMTLDDMLKKYGADATRIALAdAGDG 789
                  21111125799********************************9997724566666555.68*******************************88888 PP

  tRNA-synt_1 596 grdinl 601
                  + d n+
   KHJ30546.1 790 VTDANF 795
                  888876 PP

>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.1   3.3e-08   0.00015       4      76 ..      78     150 ..      75     191 .. 0.85
   2 !   37.6   0.0   2.3e-13     1e-09     270     370 ..     702     799 ..     686     805 .. 0.87

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 3.3e-08
                   EE--B--SS---HHHHHHHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHHHHHTTS-HHHHHHHHHHHHHH CS
  tRNA-synt_1g   4 ttalpYangklHlGhllevisaDifaRykrlrgeevlfvcgtDehGtpielkAekegvtpeelvekvheeike 76 
                   t a pY+ng+lH Gh  +v +    + + r++g+  lf  g    G+pi+ +A+k   +++ + +k+++  +e
    KHJ30546.1  78 TMAYPYMNGTLHAGHSFTVSKIEFAVGFARMQGKRSLFPMGFHCTGMPIKASADKLAAEVAIFGKKFENYKDE 150
                   89*****************************************************999998888887766554 PP

  == domain 2  score: 37.6 bits;  conditional E-value: 2.3e-13
                   GGGG.G--S......EEEEEGGGHHHHHTHHHHHHHH..TT----S-EEEE--EEE--------------HHHHHHHH-HHHHHHHHHHHS-TTS-E CS
  tRNA-synt_1g 270 ekwkeyWakdkevelvhfigkdiikFHtifwPaillg..aelklpkkvvaheyltvegkKlSkSrgvvvkakealerldadllRYylaaeapekkDl 364
                   ++++ ++        v + gkd i+ H  f+  i l+   +   p+ + a+++l ++g+K+ kS g++++ +++l+++ ad+ R  la +++  +D+
    KHJ30546.1 702 REFEYWYPL-----DVRISGKDLIPNHLTFFLYIHLAifPKEYWPRGIRANGHLLLNGEKMAKSTGNFMTLDDMLKKYGADATRIALADAGDGVTDA 793
                   566644422.....36788******************8877789***************************************************** PP

                   EE-HHH CS
  tRNA-synt_1g 365 dfswed 370
                   +f+++ 
    KHJ30546.1 794 NFEEDV 799
                   **9875 PP

>> Anticodon_1  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   2.5   2.7e-12   1.2e-08       3     135 ..     836     958 ..     834    1036 .. 0.82

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 2.7e-12
  Anticodon_1   3 wilselnklvkevteayeeyrfnkaasalyeffwndlcdwylelvkprlysesaedkraaqevllevletllrllaPfmPfitEelwqreeeel.gkk 99 
                   + +e+n +v +++++ye+ +++ a++++ + f+ +  d+y e +     +++         ++++++e    ll  ++P+ +E++w     e+  k+
   KHJ30546.1 836 LFENEMNTIVCQARQHYEDTNYKLALKSALYDFTSAR-DFYREYSAAAGVKMHR-------DLIFKYIELQALLLCVIAPHWAEYIW----LEVlHKP 921
                  57799**********************9999988877.******9988877765.......9*************************....5553677 PP

  Anticodon_1 100 esimlaewpe.kaeel..ekeleeeevellkei...vkairk 135
                   +i +a +p   a  +  +     +e e+++++   v+ +++
   KHJ30546.1 922 CTIQNALFPTvPAPNAalN-----AEREYVRATggnVTSAEA 958
                  7887777997444333332.....334443333222444444 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   1.9e-10   8.5e-07     207     282 ..     709     785 ..     697     801 .. 0.86

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 1.9e-10
                   SEEEEEEEGGGTTTHHHHHHHHHHHHSS.S--EEEEEEE--EEETTBE--TTTT---BHHHHHTTS-HHHHHHHHHS CS
  tRNA-synt_1e 207 eidihsGGiDLafPhhenelaqseaafd.kqlvkyflhnghlkiegekmsksLknfitikdvlkkfdprqlRlllls 282
                    +d+   G+DL+  h    l  + a f  + + +    nghl ++gekm+ks +nf+t+ d+lkk+ + + R++l+ 
    KHJ30546.1 709 PLDVRISGKDLIPNHLTFFLYIHLAIFPkEYWPRGIRANGHLLLNGEKMAKSTGNFMTLDDMLKKYGADATRIALAD 785
                   689999999999889999999999999944456667789*********************************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.76u 0.24s 00:00:01.00 Elapsed: 00:00:00.44
# Mc/sec: 7810.93
//
Query:       KHJ30547.1  [L=441]
Description: putative channel-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-51  174.5   7.0    3.6e-51  174.1   7.0    1.2  1  MIP       Major intrinsic protein


Domain annotation for each model (and alignments):
>> MIP  Major intrinsic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.1   7.0     2e-55   3.6e-51       3     227 .]     160     408 ..     158     408 .. 0.94

  Alignments for each domain:
  == domain 1  score: 174.1 bits;  conditional E-value: 2e-55
                 CCHHH.HHHHHHHHHHHHHHHHHHHHHHHCCCSSCSSSSTTSSHHHHHHHHHHHHHHHHHHHHHHHCHT-S-SHHHHHHHHHTTSSSHHHHHHHHHHHH CS
         MIP   3 ssvkf.lravlAEflatlllvfigvgsalnvkkkvsslaslvsvtleavalafglalavlvylaagiSGaHlNPavTlallvarkisllrailYivaQl 100
                 +sv++ lr+ ++Ef++t++lv++g gs +   ++v s++  + +t++++ +++g++++ +vy+ agiSGa lNPavTl+++++rk + ++ ++Y  +Q 
  KHJ30547.1 160 TSVRNtLREPFSEFFGTFILVLFGDGSIA---QTVLSNG--TRGTWQSICWGWGIGVMLGVYV-AGISGANLNPAVTLSNCIFRKHPWQKLPVYALGQT 252
                 56665599******************666...3333322..4579***************996.68********************************* PP

                 HHHHHHHHHHHHHCHHH...................HHHTTTTSSSSSTTSSHHHHHHHHHHHHHHHHHHHHHHCSTTSSSSTCHGHHHHHHHHHHHHH CS
         MIP 101 lGaivaaallklltkgl...................esraglfanslkpglsagqalvvEiiltfvLvlvvfaltddkrkvslgelaplaigllvalii 180
                 lGa++aa+++++ ++++                   +++ag fa++++p ++++q++++E+i  ++L+++v+al d+ +++   +++pla+++++  i 
  KHJ30547.1 253 LGAFAAAGVVYANYYAAinayegagvrtvpgalnsvNTTAGIFATYPAPFVNKTQEFFSEFIASAILMFCVYALQDKFNRGA-DKFVPLALFFVLYGIG 350
                 ***************999*****************9999**************************************99999.889************* PP

                 HHHHHHHST-SSHHHHHHHHHHHTH...........STTTTHHHHHHHHHHHHHHHHH CS
         MIP 181 lvgipltGaamNpArslgpavvlnk...........fedhwvylvGPliGailgalvY 227
                 +  +  tG+a+NpAr++gp+++++             +++wv+l++P  G + g+++Y
  KHJ30547.1 351 ACFGWETGFAINPARDFGPRLLTYFvgygndvwtvsGHYFWVPLIAPCFGCVFGGWIY 408
                 ************************99******999989*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       378  (0.0210832); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 3349.02
//
Query:       KHJ30548.1  [L=162]
Description: hypothetical protein EV44_g3500 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.21s 00:00:00.59 Elapsed: 00:00:00.35
# Mc/sec: 1370.65
//
Query:       KHJ30549.1  [L=595]
Description: putative vacuolar protein sorting-associated protein 45 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   9.6e-137  457.6   3.5   1.1e-136  457.4   3.5    1.0  1  Sec1          Sec1 family
  ------ inclusion threshold ------
       0.01   14.3   0.3      0.015   13.7   0.3    1.2  1  Cohesin_load  Cohesin loading factor


Domain annotation for each model (and alignments):
>> Sec1  Sec1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  457.4   3.5  1.2e-140  1.1e-136       1     574 [.      30     565 ..      30     566 .. 0.83

  Alignments for each domain:
  == domain 1  score: 457.4 bits;  conditional E-value: 1.2e-140
                 EEEEE-HHHHHHHHTT--HHHHHTTTEEETT..T--S-.....BTTSEEEEEE-S-HHHHHHHHHHHHSS-SBS-EEEEESS---HHHHHHHHH..S.G CS
        Sec1   1 KvLvlDkelskilssvlkvsdlleegVtkieklkkrepskrealphlkaiyflrptkenidrlakdfisarrykeyhifftprlseslleglakade.e 98 
                 K+L+lD+++ +i+s+++++s ll+++V+ +++l   +++kre+++hl++++f+rp++++i++l+ d  ++++y+ey+i+f++ +++s le+la+ad+ e
  KHJ30549.1  30 KILLLDRDTVSIISTAVTQSKLLNHEVYLVDRL---DNHKREKMRHLRCLCFVRPSPDSIQLLI-DELREPKYSEYYIYFSNIIKKSSLERLAEADDhE 124
                 9***************************88888...3446777*********************.88999**************************879 PP

                 .GGGEEEEE----SEEEETTEEE-S...TTHHHHSTTG.....GG.......--HHHHHHHHHHHHHHH-..--EEEE-TT-HHHHHHHH......... CS
        Sec1  99 vvkkvklkelnldfvplesdlfsln...pelplsfrdlyldndnsaleeeieslldriakgLlsvllslekkiPiirykgsaasmvakkladelkekid 194
                 vvk v+  e+++df+++++dlfsl+   p+        +  n+ ++    + + l+r+++gLl+ llsl kk P iry++  +s + kkla e++  i+
  KHJ30549.1 125 VVKVVH--EYFADFIVINPDLFSLElspPS------RIWSANADTW----NMDTLQRTTEGLLAALLSL-KKKPLIRYQK--NSLMTKKLATEVQYFIN 208
                 999888..****************754322......3444455566....4569***************.99*******9..9**************** PP

                 ..HHHHTTT--SS--EEEEE-GGG-SSTTTS---BHHHHHHHHS--BTEEEEEE--SS.SEEEEEE--TT...-TTHHHHTTSBHHHHHHHHHHHHHHH CS
        Sec1 195 s.kknfesessrqrpvLiIlDRsvDlvtpllhqwTYqaliddllgglnnnnvvleeep.keekeaelvess.sDeffaelrhlnfgevgeklkkeakey 290
                 + ++ f +   +++p+L+IlDR++D+vtpll+qwTYqa++++llg ++n++v+l+e+p ++++ +++v+s+ +D+ff+++++lnfg++g ++k+++++y
  KHJ30549.1 209 QeSQLFDFRAFDTPPILLILDRRDDPVTPLLTQWTYQAMVHELLG-IKNGRVDLSEVPdIRPELKQVVLSQdQDPFFKKNMYLNFGDLGGNIKDYVEQY 306
                 866666666***********************************8.99***********9999999999999*************************** PP

                 HHHHHTTT...-TTHHHHHHHHHH-GGGHHHHHHHHHHHHHHHHHHHHS-HHH.HHHHHHHHHHHHSS--.B--..-HHHHHHHH-TTS-H.HHHHHHH CS
        Sec1 291 qeenekkrngakesiadlkkfvaklpelqeekkklskHtnlaeellkevkkrkldellelEqdlatgesdkkikekkvieeliaddeptseledklRLl 389
                 q+ + k++++  +siad+k+f++++pe++++++++skH+++++el+++v +++l+e++e+Eq+la+++ +++ + k  ++ li++ +++++ + klRL+
  KHJ30549.1 307 QSRT-KNSSNI-DSIADMKRFIEEYPEFRKLSGNVSKHVTIVGELNRKVVAENLLEVSEVEQSLACND-NHAADLK-NLQRLIQS-PNVTS-DAKLRLV 399
                 **99.555555.5*****************************************************73.3555554.57799998.88888.8****** PP

                 HHHHH....-B.-HT--GG....GGHHHH....GGGGG........---.BGGG-------.................---------S...TT-.---- CS
        Sec1 390 llyslv.egglkekelkellrelvqsaly....gleylktlrsleklgllkkrkgkksskkkss..........lklikeeedeesnydlsgvs.ryaP 472
                 +lysl+ e + +++ l  l + lv  a +     ++++ +l  +++   l++++ ++s  +  +           +   +  + ++     +v+ ++ P
  KHJ30549.1 400 ALYSLRyE-KHPSNALAILVNLLVA-AGNfprnRVDIIPKLLTYQA--SLQQNQATTSGIS--NilestgifsgARDRLKGLQGVE-----NVYtQHSP 487
                 ******66.4456655544444444.32345542555666665553..1222222222222..13345555544444444444455.....5999**** PP

                 HHHHHHHHHTTT-S-TTTS-BSS-GGGS--------------------------S-EEEEEEEEEE-HHHHHHHHHHT...TSSSEEEEEEEEE--HHH CS
        Sec1 473 llvrlvealikgkklssespslskkdpsqeesssslrsakktnsaskesaekkkkqrviVffvGGvTysEiralrllskqekknkeiiigttsilnpks 571
                  l  ++++likg + ++++p+                        + ++++++k+q++i+ff+GGvT++E++++ ++++++  +++i++g+t+++n++ 
  KHJ30549.1 488 RLELTLQNLIKGRLRETQFPFI-----------------------DGGGTTRDKPQDIIIFFIGGVTFEEAKTVSQINASS-LGVRIVLGGTTVHNSTL 562
                 ***********66666666554.......................34455555689******************9999764.9**************** PP

                 HHH CS
        Sec1 572 fle 574
                 fl 
  KHJ30549.1 563 FLT 565
                 *97 PP

>> Cohesin_load  Cohesin loading factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.3   1.7e-06     0.015     144     249 ..     358     454 ..     337     462 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.7e-06
  Cohesin_load 144 llriqlslqt...dkdnsaalenlqslaelanrkgdkklfvvlslleallhlrrgspkdvlevlqeiiaaarslqldeeseqipqlkalllllellv 237
                   ll ++   q+   + +++a l+nlq+l++++n+++d kl++v++++      +++ p+++l++l ++ +aa  +        +  ++++  ll++ +
    KHJ30549.1 358 LLEVSEVEQSlacNDNHAADLKNLQRLIQSPNVTSDAKLRLVALYSLR----YEKHPSNALAILVNLLVAAGNF-------PRNRVDIIPKLLTYQA 443
                   55554444445535556666********************99998753....4555999**9999997777666.......6779999999999999 PP

  Cohesin_load 238 slqkddvknvke 249
                   slq+++ ++++ 
    KHJ30549.1 444 SLQQNQ-ATTSG 454
                   999999.44444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (595 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       611  (0.0340789); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.39
# Mc/sec: 4540.54
//
Query:       KHJ30550.1  [L=342]
Description: putative 3-methyl-2-oxobutanoate hydroxymethyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.1e-100  336.4   0.0   1.3e-100  336.1   0.0    1.1  1  Pantoate_transf  Ketopantoate hydroxymethyltransferase
    1.3e-05   24.8   0.1    2.3e-05   24.0   0.0    1.4  2  PEP_mutase       Phosphoenolpyruvate phosphomutase
  ------ inclusion threshold ------
      0.022   14.6   0.0      0.034   14.0   0.0    1.3  1  Asp_Glu_race     Asp/Glu/Hydantoin racemase


Domain annotation for each model (and alignments):
>> Pantoate_transf  Ketopantoate hydroxymethyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  336.1   0.0  2.1e-104  1.3e-100       1     258 [.      56     315 ..      56     316 .. 0.99

  Alignments for each domain:
  == domain 1  score: 336.1 bits;  conditional E-value: 2.1e-104
  Pantoate_transf   1 kvtvkdlrkmkeegekiamlTaydattAklvdeagvdviLVGDslgmvvlgyestlpvtleemiyhtkaVargakralvvadlPfgsyeaskeq 94 
                      k+t++++++++++ge+i++lTa+d++++ ++d ag+++iLVGDsl+mv +g e+t +v le+m+ h+++V+r++k+a+ v+dlP+gsye s++q
       KHJ30550.1  56 KITLNTINSLYKKGEPIMVLTAHDFPSGYIADIAGMEIILVGDSLAMVSMGLEDTSEVLLEDMLLHCRSVSRAVKTAFTVGDLPMGSYEISPKQ 149
                      689******************************************************************************************* PP

  Pantoate_transf  95 alenAarllkeggadavKleggaevaetvkalveagipVmgHiGltPqsvnalggykvqgkteeeaeklledakaleeaGafalvlEavpaela 188
                      al++A+rl+keg+++ vKlegg e+a+ v+++ +agipV+gHiGltPq++n+lgg++vqgkt+ +a k+l+da+al++aG+fa+v+Eavpa++a
       KHJ30550.1 150 ALNSAIRLVKEGRVKGVKLEGGLEMAPSVNKISTAGIPVLGHIGLTPQRQNHLGGFRVQGKTSGSALKILQDALALQKAGCFAIVIEAVPAQIA 243
                      ********************************************************************************************** PP

  Pantoate_transf 189 keiteklsiptIGIGAGaacdGqvlvlhDllglt..ekfkpkfvkkyaelaesieeavkaYaeevkegsFPa 258
                      + it++lsiptIGIGAG++c+Gqvlv+ D+ g +  e+++pkfvkky ++ ++  +++k+Y+ee k++++Pa
       KHJ30550.1 244 TLITKELSIPTIGIGAGSGCSGQVLVQADMTGNFppERNVPKFVKKYCDVWSESLKGIKKYREEAKSRNYPA 315
                      **********************************555669*******************************7 PP

>> PEP_mutase  Phosphoenolpyruvate phosphomutase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   3.8e-09   2.3e-05       2     106 ..      63     170 ..      62     186 .. 0.84
   2 ?   -4.0   0.0       1.3   7.8e+03      94     105 ..     225     236 ..     219     244 .. 0.72

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 3.8e-09
  PEP_mutase   2 raLhakgeplvlpnawDalsakiveeagfkalatsSlavaaslGvpDgeelpleellaavraiaevvslPliv.DledG.ygespee.vaetvrrliaa 97 
                 ++L +kgep++++ a+D  s  i+  ag++ + ++      s+G++D++e+ le +l ++r++ ++v+   +v Dl  G y+ sp++ ++ ++r + + 
  KHJ30550.1  63 NSLYKKGEPIMVLTAHDFPSGYIADIAGMEIILVGDSLAMVSMGLEDTSEVLLEDMLLHCRSVSRAVKTAFTVgDLPMGsYEISPKQaLNSAIRLVKEG 161
                 5789999****************************99999***************************99987659988746555554156667777777 PP

  PEP_mutase  98 GvvgvniED 106
                 +v gv +E 
  KHJ30550.1 162 RVKGVKLEG 170
                 788888885 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 1.3
  PEP_mutase  94 liaaGvvgvniE 105
                 l +aG+ +++iE
  KHJ30550.1 225 LQKAGCFAIVIE 236
                 556777777776 PP

>> Asp_Glu_race  Asp/Glu/Hydantoin racemase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   5.7e-06     0.034      50      99 ..     210     258 ..     168     271 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 5.7e-06
                   .T..THHHHHHHHHHHHCTTESEEEE--CHHHHHHHHHHHH-SSEEEECH CS
  Asp_Glu_race  50 sgddpvlklleaakkLekagadaiviaCnTahavadelqkkikiPvlgiv 99 
                   ++   +lk+l++a +L+kag+ aivi +  a   a+ ++k+++iP +gi 
    KHJ30550.1 210 KTSGSALKILQDALALQKAGCFAIVIEAVPA-QIATLITKELSIPTIGIG 258
                   34445789***********************.99999***********85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       321  (0.017904); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2575.61
//
Query:       KHJ30551.1  [L=592]
Description: putative trna (adenine-n -)-methyltransferase non-catalytic subunit trm6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.3e-106  355.3   0.0   2.8e-106  355.0   0.0    1.1  1  Gcd10p    Gcd10p family
  ------ inclusion threshold ------
       0.15   12.5   0.1       0.37   11.3   0.1    1.6  1  BAF       Barrier to autointegration factor


Domain annotation for each model (and alignments):
>> Gcd10p  Gcd10p family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  355.0   0.0  3.1e-110  2.8e-106       2     300 .]       5     365 ..       4     365 .. 0.97

  Alignments for each domain:
  == domain 1  score: 355.0 bits;  conditional E-value: 3.1e-110
      Gcd10p   2 IkpndhvllkLpsenlkivqvkpnttisLgKfgsfplnliigrpygltfeildkreeeeksrlrvvpaaeleaeslaeeeaeeeeeeee.......... 90 
                 ++pn+++ll+L+s +lki q  pnt i+L K+gsf++nl++ rpy lt+e+ld+ +++++s lr+v+a el++e +a+e+++ + e+ +          
  KHJ30551.1   5 VEPNSWILLRLTSSSLKIFQAIPNTAITLPKYGSFSVNLLLSRPYFLTYELLDRLPTQKTSLLRLVSALELNSEIIADEDNAMNLEQFTtekgiesevt 103
                 89****************************************************************************99877666544899******* PP

      Gcd10p  91 .......arsnreiiddgarQkLtkeeIeeLKkegtsagkeiIaklleshtafdqKTaFSqeKYlkrKkkKYlkrftvlpldvsllleyllekkdaqki 182
                        +rsnrei+d+++rQ+Lt++eIe+LKk gt+agk iI+kl+ sh  ++qKTaFS++KY+++K+kKYlkrftvlp+dv+ll+++++e+kda+ki
  KHJ30551.1 104 gfsskpiMRSNREIVDSASRQTLTMAEIEDLKKIGTDAGKGIIEKLISSHVGIEQKTAFSLAKYKLLKTKKYLKRFTVLPVDVPLLTQWMMEEKDAAKI 202
                 *************************************************************************************************** PP

      Gcd10p 183 lelreetlglllslanvhagg................ryLvvDdtgGLlvaalaeRmgi....................fessakegtivliheneqpn 245
                 le+ree+l+l++s+anvh+++                r+LvvD+tgGLl+a++aeRmgi                    f+++a+++ti+l+h+n+qpn
  KHJ30551.1 203 LEIREEMLALIGSWANVHFSSippslgsntnedkingRWLVVDETGGLLTASIAERMGIlypkcytqkpesntfddahdFTPMARTNTITLVHNNTQPN 301
                 ******************************************************************************88******************* PP

      Gcd10p 246 lsllkyfnydaae.........pehplkkhlktlswlqllepeedetyeeepeevseeelaelk 300
                 lsllkyf++ +++         + hpl+  l+ ++wlqll+p++d+ty+++ + +s++el+++k
  KHJ30551.1 302 LSLLKYFSFLSDKqslnmdsnaTLHPLSASLHLINWLQLLDPSQDSTYSSPIPLLSAAELSAMK 365
                 *********554478999999999*****************************99999999887 PP

>> BAF  Barrier to autointegration factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   4.1e-05      0.37      15      70 ..     145     200 ..     136     217 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 4.1e-05
         BAF  15 mgdKevtalaGigevlgkkLeekGfdkAyvvlgqfLvlkkdeelFkewlketvgan 70 
                 + +K ++   Gi ++ + +L++  + k+++ l +f vl  d  l ++w++e+ +a 
  KHJ30551.1 145 IIEKLISSHVGIEQKTAFSLAKYKLLKTKKYLKRFTVLPVDVPLLTQWMMEEKDAA 200
                 678999999*****************************************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (592 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 4295.40
//
Query:       KHJ30552.1  [L=366]
Description: putative ring finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.5e-09   37.2   0.0    6.1e-09   35.9   0.0    1.7  1  zf-NOSIP      Zinc-finger of nitric oxide synthase-interactin
    2.6e-06   27.3  12.1    4.4e-06   26.6   1.4    2.9  2  zf-RING_UBOX  RING-type zinc-finger
    5.8e-06   26.1  17.7    0.00064   19.5   8.0    3.3  2  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    8.6e-06   26.0  17.5     0.0024   18.2   8.8    3.1  2  zf-RING_2     Ring finger domain
    0.00011   21.6   4.9    0.00011   21.6   4.9    3.2  3  Rtf2          Rtf2 RING-finger
      0.001   19.2   7.7      0.001   19.2   7.7    2.8  2  FYVE          FYVE zinc finger
     0.0022   17.8  22.1     0.0029   17.4   6.2    3.3  3  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
     0.0028   17.6  10.4     0.0028   17.6  10.4    3.1  2  zf-RING_5     zinc-RING finger domain
     0.0039   17.0   4.8     0.0039   17.0   4.8    3.1  3  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
     0.0064   16.3   2.9     0.0064   16.3   2.9    2.9  4  zf-C3HC4_5    Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.019   15.1  15.0      0.065   13.4   2.7    3.6  3  zf-C3HC4_4    zinc finger of C3HC4-type, RING
      0.025   14.6  14.2       0.35   10.9   0.6    3.6  3  DZR           Double zinc ribbon
      0.071   13.2   0.6      0.071   13.2   0.6    1.9  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
       0.35   10.7  18.6       0.27   11.1   7.8    3.5  3  Prok-RING_4   Prokaryotic RING finger family 4
       0.37   11.1   0.1       0.37   11.1   0.1    3.7  4  zf-AD         Zinc-finger associated domain (zf-AD)
        1.1    8.1   8.9      0.034   13.1   1.3    1.9  2  Peptidase_C6  Helper component proteinase


Domain annotation for each model (and alignments):
>> zf-NOSIP  Zinc-finger of nitric oxide synthase-interacting protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.0   5.5e-12   6.1e-09       1      75 []       3      75 ..       3      75 .. 0.94

  Alignments for each domain:
  == domain 1  score: 35.9 bits;  conditional E-value: 5.5e-12
    zf-NOSIP  1 hgknctagavytyhekkkdtaasgygtqsvrlikdavkdfdccslslqacrdpvltedgylyekeaileyilhqk 75
                h k  t+ av+t +e+      + +gt++ rl +d+   f  c l l + r pv  + g ++ ke  l+ il qk
  KHJ30552.1  3 HSKRNTSRAVFTSYERTLAK--AAWGTNTARLSRDSFLPFASCRLCLLPARTPVSCPHGDIFCKECALKNILSQK 75
                88999*********987655..5689999********************************************98 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   2.2    0.0093        10       1      27 [.      43      72 ..      43      89 .. 0.73
   2 !   26.6   1.4   3.9e-09   4.4e-06       1      27 [.     253     284 ..     253     305 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0093
  zf-RING_UBOX  1 CpIClelftdPlvlpCGH..tFCreCl.w..e 27
                  C  Cl +  +P v +C H  +FC+eC  +   
    KHJ30552.1 43 CRLCLLPARTP-V-SCPHgdIFCKECAlKniL 72
                  88899999999.7.6999889*****963222 PP

  == domain 2  score: 26.6 bits;  conditional E-value: 3.9e-09
  zf-RING_UBOX   1 CpIClelftdP...lvl.pCGHtFCreCl.we 27 
                   Cp C+  ft+    ++  +CGH++C++C  + 
    KHJ30552.1 253 CPTCKKAFTNTskaMLIkNCGHVLCKNCAsKL 284
                   *********7777767559*********9522 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   2.1    0.0011       1.3       4      32 ..      42      69 ..      41      77 .. 0.88
   2 !   19.5   8.0   5.7e-07   0.00064       2      44 ..     250     309 ..     249     314 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0011
                B-TTTSSSBS-EEETTEEEEEE-HHHHHH CS
  zf-C3HC4_3  4 eCviClerprnvvllpCgHlvlCeeCaek 32
                 C +Cl   r+ v +p g + +C+eCa k
  KHJ30552.1 42 SCRLCLLPARTPVSCPHGDI-FCKECALK 69
                6*******************.*****965 PP

  == domain 2  score: 19.5 bits;  conditional E-value: 5.7e-07
                 GSB-TTTSS....SBS-EEETTEEEEEE-HHHHHHHHH..............TT-B-TTT- CS
  zf-C3HC4_3   2 deeCviCle....rprnvvllpCgHlvlCeeCaekllk..............rkkkCpiCr 44 
                 +++C+ C++    + + +++ +CgH+ lC++Ca+kl                 +  C +C+
  KHJ30552.1 250 QRICPTCKKaftnTSKAMLIKNCGHV-LCKNCASKLITksgtrdlctsnlklDTIFCFVCN 309
                 679******5553355577778****.*********8867755555555555555555555 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   1.6   0.00029      0.32       2      34 ..      42      72 ..      41      77 .. 0.68
   2 !   18.2   8.8   2.1e-06    0.0024       3      43 ..     253     308 ..     251     309 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00029
   zf-RING_2  2 eCpICleelssadsvlllpCgH..vfhreCler.wl 34
                +C +Cl +     ++++  C H  +f++eC+ + +l
  KHJ30552.1 42 SCRLCLLP----ARTPVS-CPHgdIFCKECALKnIL 72
                79999833....445555.999878*****865244 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 2.1e-06
   zf-RING_2   3 CpICleelssadsvl.llpCgHvfhreClerwlrssst..............CPlC 43 
                 Cp C ++++++++++ ++ CgHv +++C+++++++s t              C +C
  KHJ30552.1 253 CPTCKKAFTNTSKAMlIKNCGHVLCKNCASKLITKSGTrdlctsnlkldtifCFVC 308
                 ********88888663668************9999988899666666666666666 PP

>> Rtf2  Rtf2 RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   3.1      0.21   2.4e+02      34      73 ..      40      79 ..      33     104 .. 0.77
   2 ?   -3.9   8.2       6.1   6.9e+03     191     217 ..      92     118 ..      74     185 .. 0.42
   3 !   21.6   4.9     1e-07   0.00011      80     167 ..     225     319 ..     199     339 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.21
        Rtf2 34 wklCaLsqepLkkPivadrlGkLYnkdavleaLldkske.k 73
                +  C L   p + P v++  G ++ k+  l+++l++++e k
  KHJ30552.1 40 FASCRLCLLPARTP-VSCPHGDIFCKECALKNILSQKQEiK 79
                56688888887788.58999999999999999999876533 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 6.1
        Rtf2 191 kkkkakkkkkakakgskaeaeaaskss 217
                 ++ k++++++++    +ae e  +   
  KHJ30552.1  92 AEEKREQDEAEARLRYAAEFERVQMGL 118
                 222222222222222222222222211 PP

  == domain 3  score: 21.6 bits;  conditional E-value: 1e-07
        Rtf2  80 shikglkdvvelkltknpafeeskkdatkdtkeapfiCpltglemngktkfvalrkCGcVfsekalkevksev................ClvCgkeyke 162
                  hi +l +++e+ +t++ a          d+  ++ iCp  ++ +  + k++ +++CG+V+ ++   ++ ++                 C+vC+++   
  KHJ30552.1 225 PHIYSLHSLIEIVFTEEVAT---------DSGGTQRICPTCKKAFTNTSKAMLIKNCGHVLCKNCASKLITKSgtrdlctsnlkldtifCFVCNTDIYG 314
                 39999999999999998754.........4566788*************************999888886666678999999************99887 PP

        Rtf2 163 edvip 167
                 ed ++
  KHJ30552.1 315 EDKVT 319
                 77765 PP

>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   1.9     0.076        85      32      48 ..      59      79 ..      41     107 .. 0.72
   2 !   19.2   7.7   9.1e-07     0.001      10      63 ..     251     309 ..     244     338 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.076
                --EE-STTS-EEE.EE....G CS
        FYVE 32 GkvvCekCssklvall....e 48
                G+++C++C  k++ ++    +
  KHJ30552.1 59 GDIFCKECALKNILSQkqeiK 79
                99*******777755533330 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 9.1e-07
                 SB-TTT--B--SSS--EE-TTT--EE-STTS-EEE.EE.....GGGTEEEEEEE-HHHH CS
        FYVE  10 kkCeiCakkFsllrrrhhCrlCGkvvCekCssklvall.....ekeaeeksvrvCkeCl 63 
                 + C+ C+k+F+ +++    ++CG+v+C++C skl+++       +++ + ++  C  C 
  KHJ30552.1 251 RICPTCKKAFTNTSKAMLIKNCGHVLCKNCASKLITKSgtrdlCTSNLKLDTIFCFVCN 309
                 67*****************************9999887666664444444445566655 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   2.6    0.0011       1.2       1      32 [.      43      73 ..      43      79 .. 0.85
   2 !   17.4   6.2   2.6e-06    0.0029       1      34 [.     253     289 ..     253     296 .. 0.86
   3 ?   -0.1   0.3      0.79   8.9e+02      21      31 ..     304     314 ..     303     337 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0011
                -TTT-S--SS-E.E-TTS--..B-CHHHHHHHHC CS
    zf-C3HC4  1 CpiCleeakepnelleCkHs..fCskCirkilks 32
                C +Cl  a +p+    C H   fC++C +k + s
  KHJ30552.1 43 CRLCLLPARTPV---SCPHGdiFCKECALKNILS 73
                999**9999999...9***999*****9988774 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 2.6e-06
                 -TTT-S--SS-E....E-TTS--B-CHHHHHHHHCTS CS
    zf-C3HC4   1 CpiCleeakepn...elleCkHsfCskCirkilksrk 34 
                 Cp C++ +++++    + +C+H +C++C +k++ +++
  KHJ30552.1 253 CPTCKKAFTNTSkamLIKNCGHVLCKNCASKLITKSG 289
                 *********999998999*************998544 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.79
                 B-CHHHHHHHH CS
    zf-C3HC4  21 fCskCirkilk 31 
                 fC+ C + i+ 
  KHJ30552.1 304 FCFVCNTDIYG 314
                 89999988876 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   3.3      0.18   2.1e+02      19      33 ..      55      71 ..      42      80 .. 0.71
   2 !   17.6  10.4   2.5e-06    0.0028       2      34 ..     253     289 ..     252     310 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.18
   zf-RING_5 19 sCgH..ifCekClkkll 33
                sC H  ifC++C+ k+ 
  KHJ30552.1 55 SCPHgdIFCKECALKNI 71
                6755448*****98876 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 2.5e-06
   zf-RING_5   2 CnkCfeklskeek.fyltsCgHifCekClkkll...e 34 
                 C+ C + +++++k + + +CgH++C++C++kl    +
  KHJ30552.1 253 CPTCKKAFTNTSKaMLIKNCGHVLCKNCASKLItksG 289
                 999999995555549999************9987663 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   2.3    0.0013       1.5       2      34 ..      43      75 ..      42      77 .. 0.77
   2 !   17.0   4.8   3.5e-06    0.0039       2      34 ..     253     288 ..     250     294 .. 0.79
   3 ?   -3.3   0.2       7.6   8.5e+03       2       5 ..     305     308 ..     304     314 .. 0.58

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0013
  zf-C3HC4_2  2 CpiCldmlkdpsvvtpCgHv..fCqkCilr.sLeek 34
                C +Cl    +p     C H+  fC++C l+  L++k
  KHJ30552.1 43 CRLCLLPARTP---VSCPHGdiFCKECALKnILSQK 75
                99999999998...56777444******99677766 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 3.5e-06
  zf-C3HC4_2   2 CpiCldmlkdp...svvtpCgHvfCqkCilrsLeek 34 
                 Cp C   + ++   + +++CgHv C++C  + ++++
  KHJ30552.1 253 CPTCKKAFTNTskaMLIKNCGHVLCKNCASKLITKS 288
                 999999998752216778***********9977665 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 7.6
  zf-C3HC4_2   2 CpiC 5  
                 C +C
  KHJ30552.1 305 CFVC 308
                 5555 PP

>> zf-C3HC4_5  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.3       6.1   6.9e+03      42      48 ..      53      59 ..      48      67 .. 0.67
   2 ?   -1.2   0.0       1.7     2e+03       2      17 ..     212     227 ..     211     231 .. 0.77
   3 !   16.3   2.9   5.7e-06    0.0064       3      40 ..     252     287 ..     250     297 .. 0.85
   4 ?   -2.1   0.0       3.4   3.8e+03       4      12 ..     305     313 ..     301     317 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 6.1
  zf-C3HC4_5 42 PnqCPva 48
                P +CP+ 
  KHJ30552.1 53 PVSCPHG 59
                6677763 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.7
  zf-C3HC4_5   2 eiCPvCkssrYlnpdl 17 
                  + P+C +s+  np +
  KHJ30552.1 212 KLFPICPASQIENPHI 227
                 5679999999888876 PP

  == domain 3  score: 16.3 bits;  conditional E-value: 5.7e-06
  zf-C3HC4_5   3 iCPvCkssrYlnpdleflinpeCYhkmCesCvdRlFsd 40 
                 iCP Ck   + n +  +li  +C h +C++C+ +l ++
  KHJ30552.1 252 ICPTCKK-AFTNTSKAMLIK-NCGHVLCKNCASKLITK 287
                 8****95.699999999996.8***********99865 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 3.4
  zf-C3HC4_5   4 CPvCkssrY 12 
                 C vC+++ Y
  KHJ30552.1 305 CFVCNTDIY 313
                 889998876 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   2.0    0.0054       6.1       1      29 [.      43      71 ..      43      80 .. 0.83
   2 ?   13.4   2.7   5.8e-05     0.065       1      34 [.     253     290 ..     253     296 .. 0.71
   3 ?   -0.5   0.1       1.2   1.4e+03      19      26 ..     303     310 ..     297     319 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0054
  zf-C3HC4_4  1 CPiCldYLekPvsleCGhsfClsCisslq 29
                C+ Cl     Pvs + G +fC +C  +  
  KHJ30552.1 43 CRLCLLPARTPVSCPHGDIFCKECALKNI 71
                999999999***************76654 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 5.8e-05
  zf-C3HC4_4   1 CPiCldYLek...Pvsl.eCGhsfClsCisslqkepdg 34 
                 CP C + +++    + + +CGh+ C +C s+l  ++  
  KHJ30552.1 253 CPTCKKAFTNtskAMLIkNCGHVLCKNCASKLITKSGT 290
                 8888877764111455658************9988744 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 1.2
  zf-C3HC4_4  19 sfClsCis 26 
                 +fC+ C +
  KHJ30552.1 303 IFCFVCNT 310
                 79999965 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.8     0.062        69       8      20 ..      56      68 ..      42      84 .. 0.78
   2 ?   10.9   0.6   0.00031      0.35      12      40 ..     250     286 ..     207     291 .. 0.90
   3 ?    8.0   0.8    0.0026       2.9       4      26 ..     294     316 ..     292     346 .. 0.71

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.062
         DZR  8 lppdarfCseCgt 20
                 p++++fC+eC  
  KHJ30552.1 56 CPHGDIFCKECAL 68
                5778888988865 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00031
         DZR  12 arfCseCgtklkavaa........edrCpsCgekvdp 40 
                 +r C++C+++  ++++        +  C +C +k+  
  KHJ30552.1 250 QRICPTCKKAFTNTSKamlikncgHVLCKNCASKLIT 286
                 689999999988777789999999999****998765 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0026
         DZR   4 CgeelppdarfCseCgtklkava 26 
                 C ++l+ d +fC+ C+t++  + 
  KHJ30552.1 294 CTSNLKLDTIFCFVCNTDIYGED 316
                 99999************986544 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.6   6.3e-05     0.071      34      75 ..     252     295 ..     226     302 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 6.3e-05
                 --TTCSTTTTT..S-EEEBTTS-EEEHHHHHHHHHHHSTSSB-T CS
  zf-ANAPC11  34 tcpsckfpGdd..cplvlGkckhnfhlhcilkwletetskglcp 75 
                  cp+ck    +   ++++ +c h++ + c  k + ++ +++lc 
  KHJ30552.1 252 ICPTCKKAFTNtsKAMLIKNCGHVLCKNCASKLITKSGTRDLCT 295
                 7****976554115799999**********************96 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   3.0      0.11   1.3e+02       1      25 [.      43      67 ..      43      74 .. 0.79
   2 ?    1.9   0.1      0.18     2e+02      32      42 ..     252     262 ..     245     266 .. 0.78
   3 ?   11.1   7.8   0.00024      0.27       3      44 ..     255     302 ..     253     315 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.11
  Prok-RING_4  1 CvlCgeqekkailepCgHlvCkeCf 25
                 C lC    ++++  p g ++CkeC 
   KHJ30552.1 43 CRLCLLPARTPVSCPHGDIFCKECA 67
                 7788888888877777779*****5 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.18
  Prok-RING_4  32 sCPlCqrrisk 42 
                   CP C++ + +
   KHJ30552.1 252 ICPTCKKAFTN 262
                  5****998766 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 0.00024
  Prok-RING_4   3 lCgeq....ekkailepCgHlvCkeCfdsk..dlssCPlCqrrisksd 44 
                   C+++     k + ++ CgH++Ck+C ++   ++ +  lC ++++ ++
   KHJ30552.1 255 TCKKAftntSKAMLIKNCGHVLCKNCASKLitKSGTRDLCTSNLKLDT 302
                  555555544788899***********9987433336677777766555 PP

>> zf-AD  Zinc-finger associated domain (zf-AD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.8      0.21   2.4e+02       2       7 ..      43      53 ..      42      93 .. 0.59
   2 ?   11.1   0.1   0.00033      0.37      23      58 ..     225     262 ..     204     266 .. 0.80
   3 ?    1.1   0.6      0.41   4.6e+02      45      67 ..     273     295 ..     269     300 .. 0.73
   4 ?   -2.7   0.1       6.7   7.6e+03       2      20 ..     305     322 ..     304     342 .. 0.58

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.21
       zf-AD  2 CRlCl.....s 7 
                CRlCl      
  KHJ30552.1 43 CRLCLlpartP 53
                *****555431 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00033
       zf-AD  23 s..islaeileeltglelepddslpekiCesCleklqe 58 
                     sl +++e ++  e+ +d +  + iC +C++++++
  KHJ30552.1 225 PhiYSLHSLIEIVFTEEVATDSGGTQRICPTCKKAFTN 262
                 1445899**************************99875 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.41
       zf-AD  45 pekiCesCleklqefyeFrekcv 67 
                 ++ +C++C +kl      r+ c+
  KHJ30552.1 273 GHVLCKNCASKLITKSGTRDLCT 295
                 5669*******977666666665 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 6.7
       zf-AD   2 CRlClseeseellsifdts 20 
                 C +C  ++  +++++++++
  KHJ30552.1 305 CFVCN-TDIYGEDKVTQKR 322
                 88887.5555555555544 PP

>> Peptidase_C6  Helper component proteinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.3     3e-05     0.034      32     120 ..      56     141 ..      42     183 .. 0.72
   2 ?   -1.1   1.2      0.61   6.8e+02      34      49 ..     272     287 ..     248     322 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3e-05
  Peptidase_C6  32 lPkrklrCktCaervakskkadilkalrkakrrgllelGkekdrfiadekvlikLlelseppsldletiseitkiigekddepFkrirv 120
                    P++++ Ck Ca++ + s+k++i + l+ ++ r+ +e  + +++  a+     +   + e +++ le  s itk++ +++++  +  ++
    KHJ30552.1  56 CPHGDIFCKECALKNILSQKQEIKR-LKLHQGREQKEAEEKREQDEAEA--RLRYAAEFERVQMGLESKSTITKSVEQNKEDWENTANS 141
                   599*******************955.55555555344444444444444..34566778899********9****98888775555444 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.61
  Peptidase_C6  34 krklrCktCaervaks 49 
                   ++++ Ck Ca + + +
    KHJ30552.1 272 CGHVLCKNCASKLITK 287
                   5666666666665533 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1567  (0.0874003); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 2589.02
//
Query:       KHJ30553.1  [L=501]
Description: putative map kinase kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.8e-64  215.4   0.0    1.1e-63  215.1   0.0    1.1  1  Pkinase         Protein kinase domain
    8.1e-35  120.3   0.0    1.1e-34  119.9   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
    5.6e-06   25.9   0.0    9.3e-06   25.2   0.0    1.3  1  Kinase-like     Kinase-like
    0.00011   21.1   0.0    0.00019   20.4   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase
       0.01   15.5   0.0        1.8    8.2   0.0    2.3  2  FTA2            Kinetochore Sim4 complex subunit FTA2


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.1   0.0   3.1e-67   1.1e-63       2     264 .]     208     477 ..     207     477 .. 0.89

  Alignments for each domain:
  == domain 1  score: 215.1 bits;  conditional E-value: 3.1e-67
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE..SSEEEEEEE--TTEBHHHHHH....HHSS CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee..kdelylvleyveggeladlle....rkgs 94 
                 ++l+ lGeG+ G V k+v k  + i+A+K+i ++ + + k+ +++rE+ + k +  ++i+r+y++f e  + ++ + +e++egg+l+++++      g 
  KHJ30553.1 208 QELSSLGEGAGGAVTKCVLKGGKTIFALKIITTNPDPDVKK-QIVRELGFNKDCANEHICRYYGAFVEtsTATISIAMEFCEGGSLDSIYRevkkLGGR 305
                 57789*****************************9999885.9***********************9944556779**************976433344 PP

                 --HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHS CS
     Pkinase  95 lseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltg 193
                   e+ + kia+ +l+gl ylH k+iiHrD+Kp+NiL+ ++g++K++DFG++ e+ ++ ++++f+gts+Y+APE +++++y+ ++DvWs Gv+l+e+   
  KHJ30553.1 306 TGEKVLGKIAEGVLNGLTYLHGKKIIHRDIKPSNILLCRDGQVKLCDFGVSGEFGTKGDANTFIGTSYYMAPERITGQSYTITSDVWSTGVTLLEVAQH 404
                 88999********************************************************************************************** PP

                 S-STTTSSHHHHHHHHHHTHHHHHHHCT....SHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 194 kppfsgekgkekvekeldqlekilkilg....etkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 + pf+++ ++ + ++ l +   ++ i++    + k + +   + se++k +++ +l+k p++R t   +l+hp++
  KHJ30553.1 405 RFPFPADGTDVQPRAGLID--LLTYIVRqpvpKLKDEPEAGIKWSENFKYFIECCLEKVPSRRATPWRMLEHPWM 477
                 *****77777766666666..34444444444555555556666******************************7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.9   0.0   3.1e-38   1.1e-34       4     205 ..     210     407 ..     207     473 .. 0.84

  Alignments for each domain:
  == domain 1  score: 119.9 bits;  conditional E-value: 3.1e-38
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHHHHHHTCT.. CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvct..keepllivteyvkgGdLlkfLrkkek.. 97 
                   ++lGeGa G V ++ lk      ++  a+K+++ + + + k+++++e+ + k++ +++i +++g+ +  ++ ++ i +e+++gG+L++  r+ +k  
   KHJ30553.1 210 LSSLGEGAGGAVTKCVLK----GGKTIFALKIITTNPDPDVKKQIVRELGFNKDCANEHICRYYGAFVetSTATISIAMEFCEGGSLDSIYREVKKlg 303
                  578***************....88999****************************************954556699*************999874411 PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvll 195
                   ++  k l ++a  v +G+ yL+ kk++Hrd+   N+Ll+++ +vk++DfG++ +     +  ++++      +mapE ++ +++t  sDvWs Gv+l
   KHJ30553.1 304 GRTGEKVLGKIAEGVLNGLTYLHGKKIIHRDIKPSNILLCRDGQVKLCDFGVSGEF---GTKGDANTFIGTSYYMAPERITGQSYTITSDVWSTGVTL 398
                  4556666779999999****************************************...444555556667789************************ PP

                  HHHHTTSSGT CS
  Pkinase_Tyr 196 wEiftlgesp 205
                   E+++  + p
   KHJ30553.1 399 LEVAQ-HRFP 407
                  ***98.4444 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   2.6e-09   9.3e-06     157     251 ..     322     409 ..     298     418 .. 0.84

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 2.6e-09
  Kinase-like 157 aanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve..kgfaPpE.llgsrggytrknktkmthkldaWqlGlviyriwclklPlt 251
                    +L+ k ++h ++++ n+ll ++g+++l +f+     gtk+ +++      +  pE ++g+           +t+  d+W  G++ + ++    P+ 
   KHJ30553.1 322 LTYLHGKKIIHRDIKPSNILLCRDGQVKLCDFGVSGEFGTKGDANTFIgtSYYMAPErITGQ----------SYTITSDVWSTGVTLLEVAQHRFPFP 409
                  579****************************************8765544334445404444..........79*****************9999986 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   5.3e-08   0.00019     314     397 ..     317     391 ..     306     394 .. 0.86

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 5.3e-08
  Pkinase_fungal 314 DaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHsyrhDL 397
                      +++g+  L+  ++i+HrDi   Nil++     ++ +  L D+ +  e ++   + +a++ +GT ++ma e + g++ ++  D+
      KHJ30553.1 317 GVLNGLTYLH-GKKIIHRDIKPSNILLC-----RDGQVKLCDFGVSGEFGT---KGDANTFIGTSYYMAPERITGQSYTITSDV 391
                     67889999**.9****************.....89999************5...3445689********999998877777765 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.9   0.0    0.0048        17      20      58 ..     203     243 ..     200     284 .. 0.61
   2 !    8.2   0.0   0.00049       1.8     169     212 ..     306     354 ..     287     356 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0048
        FTA2  20 aekdiefleyLgkglhsiVlkvkirgk..eYALKlFrflea 58 
                  e++i+ l+ Lg+g+ + V k   +g   ++ALK+ ++  +
  KHJ30553.1 203 MENRIQELSSLGEGAGGAVTKCVLKGGktIFALKIITTNPD 243
                 56789999*************988775569****8665522 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00049
        FTA2 169 eqeelevsqlpkllrdlkklhklgIvvrDlkeenyi...dg..kLvDls 212
                   e++  ++++ +l+ l  lh   I++rD+k++n++   dg  kL+D++
  KHJ30553.1 306 TGEKVLGKIAEGVLNGLTYLHGKKIIHRDIKPSNILlcrDGqvKLCDFG 354
                 567777889999**********************865555533799997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (501 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3745.57
//
Query:       KHJ30554.1  [L=404]
Description: putative atp-dependent rna helicase dbp8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-40  138.2   0.1    1.3e-39  135.7   0.0    2.0  2  DEAD        DEAD/DEAH box helicase
    1.1e-30  106.2   0.1    3.8e-30  104.5   0.2    1.9  2  Helicase_C  Helicase conserved C-terminal domain
    4.9e-06   26.6   0.0      9e-06   25.8   0.0    1.4  1  ResIII      Type III restriction enzyme, res subunit
     0.0074   15.0   0.0      0.011   14.5   0.0    1.2  1  SNF2_N      SNF2 family N-terminal domain
  ------ inclusion threshold ------
      0.036   13.7   0.0       0.06   13.0   0.0    1.2  1  SWI2_SNF2   SWI2/SNF2 ATPase
       0.16   11.2   0.0       0.28   10.4   0.0    1.3  1  SecA_DEAD   SecA DEAD-like domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.7   0.0   4.5e-43   1.3e-39       7     174 ..       2     170 ..       1     172 [. 0.91
   2 ?   -0.0   0.0      0.22   6.6e+02      48     104 ..     227     284 ..     199     293 .. 0.75

  Alignments for each domain:
  == domain 1  score: 135.7 bits;  conditional E-value: 4.5e-43
                 HHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEEEEEH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   7 aiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdivvgtp 105
                 +ip+il+g+d+++  +TGsGKT af++p+lq+ ++  + tg  al+++PtreLa q+++++k + ++ +l+++li+gg++ r q  +l ++++iv++tp
  KHJ30554.1   2 CIPEILKGRDCIGGSRTGSGKTVAFAVPILQKWAN--DLTGIFALVLTPTRELALQIYEQFKALSSPHQLKAVLITGGSDMRPQAIALAQRPHIVIATP 98 
                 79*******************************87..9**************************************************999******** PP

                 HHHHHHH....HCTSSHCTTEEEEEEETHHHHHHT....TTHHHHHHHHHHSHHHCTTST.TTSEEEEEESSBSHHHH CS
                 xxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx RF
        DEAD 106 grlddll....stgklnlsqvrflVlDEadrlldq....gfsdfinrilnqlpqitcdgk.lqrqvivlSATlpkdvk 174
                 grl+d++    ++    l++v+++VlDEadrll      ++ ++++++l+ lp      + +qrq+++++AT++ +v+
  KHJ30554.1  99 GRLADHIrtsgEDTICALRRVQIVVLDEADRLLACenagSMLPDVEECLSVLP------PtSQRQTLLFTATVTPEVR 170
                 *******7654444466****************98767788899999999995......557899********98776 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.22
                 -EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTT.CSEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx RF
        DEAD  48 pkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldng.vdivvgt 104
                  k +i+   r  + ++l++l +++++    +++ +++ ++ d+l +++++ ++i+v+t
  KHJ30554.1 227 SKSIIIFCNRTTTADVLTHLLRLLEHRVTALHSRLSQRQRIDNLGRFRASaARILVAT 284
                 5778888888888889999999988633455566777777777777775569999998 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       3.4     1e+04      15      29 ..     154     169 ..     145     181 .. 0.73
   2 !  104.5   0.2   1.3e-33   3.8e-30       8     111 .]     218     322 ..     211     322 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 3.4
                 TTSEEEEEESSHH.HH CS
  Helicase_C  15 eggkilifvntid.rl 29 
                 +++++l+f+ t++ ++
  KHJ30554.1 154 SQRQTLLFTATVTpEV 169
                 6889999999988655 PP

  == domain 2  score: 104.5 bits;  conditional E-value: 1.3e-33
                 HHH.HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHT CS
  Helicase_C   8 ell.kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqriG 105
                  ll ++ ++ + i+if+n++++++ ++ ll+  + +v++lh++l+q++r++ l +f++   ++L+atdva+rG+dip+v+lVin+d+pr++ +yi+r+G
  KHJ30554.1 218 VLLlTSANISKSIIIFCNRTTTADVLTHLLRLLEHRVTALHSRLSQRQRIDNLGRFRASAARILVATDVAARGLDIPEVELVINYDVPRDPNDYIHRVG 316
                 443589999************9988666656669***************************************************************** PP

                 TSSSTT CS
  Helicase_C 106 RtgRag 111
                 Rt+Rag
  KHJ30554.1 317 RTARAG 322
                 ****97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0     3e-09     9e-06      32     169 ..      17     165 ..      12     167 .. 0.75

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 3e-09
                 STTSTHHHHHHHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.........-SEEEEEHHHHHHTH........H CS
      ResIII  32 aTGtGKTlvaaklierllkkgkee.kflflvprkslleqtleefkkflseaykeigkkvsgdkkka..kekdstnkkilvttiqsldadseeeeeesee 127
                  TG+GKT+  a  i + + +      +l+l p+++l  q +e+fk ++s+++ ++   ++g ++++      ++  +i+++t  +l  ++ +++ e++ 
  KHJ30554.1  17 RTGSGKTVAFAVPILQKWANDLTGiFALVLTPTRELALQIYEQFKALSSPHQLKA-VLITGGSDMRpqAIALAQRPHIVIATPGRLADHI-RTSGEDTI 113
                 5********9887777776644444789**********************98863.4444444444333445788899999999999999.44777777 PP

                 HHTTT-SEEEEETGGGTTS.T.......TTHHHHHT---...SEEEEEESS- CS
      ResIII 128 llrdrfdviiiDEaHrlgakk.......swreilekfke...avllglTATp 169
                     r ++++ DEa rl a +        ++e+l  +++      l +TAT 
  KHJ30554.1 114 CALRRVQIVVLDEADRLLACEnagsmlpDVEECLSVLPPtsqRQTLLFTATV 165
                 888888899********99844555555666666666333437888899996 PP

>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   3.7e-06     0.011      64     190 ..      18     131 ..       5     172 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.7e-06
                 TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--H.HHHHHHHHHHHHH-TTS-EEE--SSHHHH-----------------EEEE-HHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  64 mGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPa.slldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydvvittYdvls 161
                 +G GKTv     il      +k+++          +L++ P+ +l+ q ++++++  s+ +l+ +  +g++ m+++    a +l++  ++vi t  +l+
  KHJ30554.1  18 TGSGKTVAFAVPIL------QKWAND----LTGIFALVLTPTrELALQIYEQFKALSSPHQLKAVLITGGSDMRPQ----AIALAQRPHIVIATPGRLA 102
                 67777777777777......222221....2223379*****9********************9999999877777....8999*************** PP

                 HHT......TTS-S-S-SEEEES-GGGT- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 162 reaelqkkrsvlkqvewkrvvlDEghtlk 190
                  +   + + +    ++ + vvlDE+ +l 
  KHJ30554.1 103 DHIRTSGEDTICALRRVQIVVLDEADRLL 131
                 7775555555555566899******9974 PP

>> SWI2_SNF2  SWI2/SNF2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0     2e-05      0.06      27     132 ..      18     130 ..      15     148 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2e-05
   SWI2_SNF2  27 qGSGKsltmvf.lakklleeelknpkvvvvtDRkdLdkQlsktfaka...geekpkqaesrkeLkell..ekesekiifttiqKfeee..ekeklevls 117
                 +GSGK++  ++ + +k ++ +l+    +v+t  ++L  Q++++f+++   ++ k++ ++ +++++ +    +++++i+++t  +++++  ++ + + + 
  KHJ30554.1  18 TGSGKTVAFAVpILQKWAN-DLTGIFALVLTPTRELALQIYEQFKALsspHQLKAVLITGGSDMRPQAiaLAQRPHIVIATPGRLADHirTSGEDTICA 115
                 8****98654414444444.89999999*****************983332334456778888886653346799**********85433222346667 PP

   SWI2_SNF2 118 ereniivlvDEaHRs 132
                  r+  iv+ DEa R 
  KHJ30554.1 116 LRRVQIVVLDEADRL 130
                 777779999***995 PP

>> SecA_DEAD  SecA DEAD-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   9.4e-05      0.28      97     211 ..      16     132 ..       6     140 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 9.4e-05
                 xxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   SecA_DEAD  97 mkTGEGKtlvatlpay...lnaltgkgvhvvtvndYLakrdaewmgpvyeflGlsvgvie..seleseerreaYeaditYgtnnelgfdyLrDnlalsk 190
                  +TG GKt++ ++p++    n ltg    v+t    La +  e+++ + + + l+  +i+  s++++++   a + +i+ +t        L D++++s 
  KHJ30554.1  16 SRTGSGKTVAFAVPILqkwANDLTGIFALVLTPTRELALQIYEQFKALSSPHQLKAVLITggSDMRPQAIALAQRPHIVIATPGR-----LADHIRTSG 109
                 58*******9988875222799***********************************9983345899999999999******987.....568888888 PP

                 xxxxx..xxxxxxxxxxxxxxxx RF
   SecA_DEAD 191 eelvq..rglnfaivDEvDsvLi 211
                 e+++   r ++++++DE+D +L 
  KHJ30554.1 110 EDTICalRRVQIVVLDEADRLLA 132
                 88754459***********9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (404 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       583  (0.0325172); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.36
# Mc/sec: 3333.40
//
Query:       KHJ30555.1  [L=298]
Description: hypothetical protein EV44_g2208 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00024   21.0   1.6    0.00024   21.0   1.6    1.7  2  zf-CCHC    Zinc knuckle
     0.0029   17.4   6.0     0.0029   17.4   6.0    1.8  2  zf-CCHC_2  Zinc knuckle
     0.0089   15.7   4.9      0.017   14.8   4.9    1.5  1  zf-CCHC_5  GAG-polyprotein viral zinc-finger


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.2         2   1.2e+04      14      17 ..      74      77 ..      74      78 .. 0.78
   2 !   21.0   1.6     4e-08   0.00024       2      16 ..     181     195 ..     180     196 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 2
                TTST CS
     zf-CCHC 14 rdCp 17
                r+C+
  KHJ30555.1 74 RECD 77
                8998 PP

  == domain 2  score: 21.0 bits;  conditional E-value: 4e-08
                 CTSSSSSSSSTTTTS CS
     zf-CCHC   2 kCynCGepGHiardC 16 
                 +C+ C + GH+a+dC
  KHJ30555.1 181 TCHICKRKGHWAKDC 195
                 8************** PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   6.0   4.9e-07    0.0029       6      19 ..     182     195 ..     181     195 .. 0.97
   2 ?   -2.8   0.1         1   6.2e+03      17      21 .]     266     270 ..     265     270 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 4.9e-07
   zf-CCHC_2   6 ChiCgkkGHyIqdC 19 
                 ChiC+ kGH+ +dC
  KHJ30555.1 182 CHICKRKGHWAKDC 195
                 ************** PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1
   zf-CCHC_2  17 qdCPt 21 
                  +CP+
  KHJ30555.1 266 ETCPN 270
                 68**6 PP

>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   4.9   2.8e-06     0.017       2      23 ..     179     200 ..     178     205 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.8e-06
                 --B-TTT-SSBS-TTT---SEE CS
   zf-CCHC_5   2 pglCpRCkkgkHwardChskfd 23 
                 ++ C  Ck+  Hwa+dC  k +
  KHJ30555.1 179 DDTCHICKRKGHWAKDCLQKNH 200
                 68899************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1049  (0.0585086); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 2532.50
//
Query:       KHJ30556.1  [L=163]
Description: hypothetical protein EV44_g5980 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.35
# Mc/sec: 1414.24
//
Query:       KHJ30557.1  [L=707]
Description: hypothetical protein EV44_g2377 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.026   14.4   0.1       0.07   13.0   0.1    1.7  1  F-box-like  F-box-like


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   3.9e-06      0.07       1      36 [.     108     157 ..     108     164 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.9e-06
  F-box-like   1 isrLPdEiLlqIF...syLppsd............LlrlalVCrrWrrval 36 
                 +++LP  i +qIF   sy p++d            Ll +a+ Cr +++ al
  KHJ30557.1 108 WQNLPYHIFVQIFrfaSY-PLYDertfqplpsgswLLKIARMCRAFAEPAL 157
                 689**********54423.3333334445555555999*******998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (707 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.38
# Mc/sec: 5613.43
//
Query:       KHJ30558.1  [L=96]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        6.6    6.7   9.0         17    5.3   9.1    1.7  1  zf-CCHC_6  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   9.1   0.00095        17       3      19 ..       5      20 ..       3      34 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.00095
   zf-CCHC_6  3 KCknCGAFGHtarSkrC 19
                KC+nCG   H+  S+rC
  KHJ30558.1  5 KCRNCGG-PHRSNSRRC 20
                9*****8.5*******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       979  (0.0546043); expected 358.6 (0.02)
Passed bias filter:                      599  (0.0334096); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 809.42
//
Query:       KHJ30559.1  [L=118]
Description: hypothetical protein EV44_g3940 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 902.46
//
Query:       KHJ30560.1  [L=197]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1341  (0.074795); expected 358.6 (0.02)
Passed bias filter:                      496  (0.0276647); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1514.23
//
Query:       KHJ30561.1  [L=361]
Description: putative mfs drug transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-06   27.2  28.4    0.00046   19.2  29.6    2.7  2  MFS_1     Major Facilitator Superfamily
    1.7e-06   26.8  13.7      9e-06   24.4  13.7    2.1  1  TRI12     Fungal trichothecene efflux pump (TRI12)
  ------ inclusion threshold ------
        8.4    5.0   6.8         17    4.0   0.1    2.2  2  DUF2207   Predicted membrane protein (DUF2207)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2  29.6   7.7e-08   0.00046     132     352 ..      27     237 ..       1     238 [. 0.61
   2 !    3.2   0.0    0.0055        33     149     184 ..     305     340 ..     296     358 .. 0.74

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 7.7e-08
       MFS_1 132 lGailgpllggllasslgWrav....fyilaivsllafv....lfllllpeepperkrkspkeeekgtgpaplvpawkallkdpvlw.illialllfff 221
                 lG++l+ ++++l +  l+W +v      ++ ivsl+++      fll+ +                  ++ pl++   +++k++ +    +i++l+++ 
  KHJ30561.1  27 LGVLLTLAASSLTILGLSWGGVvypwLSVHVIVSLILGTlsavAFLLWEWKG----------------AQLPLLS--VMIFKSRMVQaTTVITFLSGW- 106
                 4444444444433333333333222222222222222221100211222222................3334444..556666644112444444443. PP

       MFS_1 222 gfsglltllplylqevlglsglllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavt.ssavllllvlvliGfglgfvfp 319
                  +   ++++p++ q  +g++    a+ +l  + lv  +++ l+g ++   gr r  l+++ +l  ++lgl    ++ s+ +  l   +l+Gfg g +f 
  KHJ30561.1 107 NYLVQTFFIPSFYQLAYGYT-PTRAASMLLPIILVQTASSTLSGLVVSWRGRYRESLIFGYILWSISLGLHSSLTPsSNLATQLGYGFLLGFGTGHCFQ 204
                 6666899999999*******.56666555555555555588999999999995555555555555555555444443666666669999********** PP

       MFS_1 320 sllalasdlappeeagtasglfntagslggalg 352
                 ++l +++ ++ +e+++ ++g+ + +++lgg +g
  KHJ30561.1 205 PSLIAMQASVTKEYMAVITGVRSYLQCLGGTFG 237
                 ******************************998 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.0055
       MFS_1 149 gWravfyilaivsllafvlfllllpeepperkrksp 184
                 g+r +fy+ ++++++ +++ ++++p+ + + ++ ++
  KHJ30561.1 305 GFRRIFYLSTALGIIPIIVTIFFIPQVELKTEKRPQ 340
                 8999************99877777655555444444 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4  13.7   1.5e-09     9e-06     232     551 ..      17     325 ..       1     354 [. 0.77

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 1.5e-09
       TRI12 232 kreelakldwigiilvivgvslfllgvswggkpnspwnsakviglissglgslvvfalyevygkpvrpivppalfkdtrgfvcillissimgamnlslv 330
                  + ++  +d++g++l  +  sl +lg+swgg    pw s +vi  +  g  s v f l+e  g  + p++   +fk  r + +  +i+ + g   l  +
  KHJ30561.1  17 WKSKIKTVDFLGVLLTLAASSLTILGLSWGGVV-YPWLSVHVIVSLILGTLSAVAFLLWEWKGA-QLPLLSVMIFKS-RMVQATTVITFLSGWNYLVQT 112
                 3556788************************75.7********99999999*********8885.67********95.77888999999********** PP

       TRI12 331 iiypqqvvnifgsslknweetawmsatasfgtgagvvvlgslfhlvrhirwqilvgalwltaflgamssvn.rdnknaaialsvlsgfvvawaqditml 428
                  + p      +g +      +a m     +   a   + g ++      r  ++ g +  +  lg  ss+    n  + +   +l gf  + + + +++
  KHJ30561.1 113 FFIPSFYQLAYGYTP---TRAASMLLPIILVQTASSTLSGLVVSWRGRYRESLIFGYILWSISLGLHSSLTpSSNLATQLGYGFLLGFGTGHCFQPSLI 208
                 ****99888888764...457778888888888888889999999889999999999988999******97246777889999**************** PP

       TRI12 429 lvqfittdedlgvafavvaaarpfagsiftaafislysnrypkel....ashlssalrgtdipqasfsslleaaks.grieavkalpgmtteiaavvsr 522
                  +q   t e + v   v +  + + g  f  a+     nr   +     + h  +al   +     +  +l   +s   i   k l     + a v+  
  KHJ30561.1 209 AMQASVTKEYMAVITGVRSYLQCL-GGTFGLAITGSILNRILLNAfdyaSKHGLAALSSEQ-----IKQILRNPTSlASITDSKIL-----DKADVIKS 296
                 **********99988877666554.555666655555555543320000334444444444.....44455444431333333333.....44666666 PP

       TRI12 523 amadsytasyanvyyfamalgvipiiasl 551
                    ++y   +  ++y++ alg+ipii ++
  KHJ30561.1 297 LTLEAYFDGFRRIFYLSTALGIIPIIVTI 325
                 77788999999***************886 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   3.0    0.0066        40     372     430 ..      13      74 ..       9     122 .. 0.80
   2 ?    4.0   0.1    0.0029        17     320     398 ..     247     328 ..     208     338 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.0066
     DUF2207 372 fdkkgkkklkklsalglgliilglilillallllvll...lvfllilllillliaiivlllf 430
                  d + k+k+k++ +lg++l++++  l++l+l   +++   l+  +i++lil+ ++++++ll 
  KHJ30561.1  13 VDGNWKSKIKTVDFLGVLLTLAASSLTILGLSWGGVVypwLSVHVIVSLILGTLSAVAFLLW 74 
                 67788999999999999999999998888877666655556667777777777777777765 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.0029
     DUF2207 320 kalldlLfdkseeg.ks..lkeikkyakkskkkakkfkkalkkwksavkkkergyfdkkgkkklkklsalglgliilglili 398
                 + ll+++  +s++g +   +++ik+ +++  ++a+   +++ + ++ +k+ + + + +  +++++ + alg++ ii+ +++i
  KHJ30561.1 247 RILLNAFDYASKHGlAAlsSEQIKQILRNPTSLASITDSKILDKADVIKSLTLEAYFDGFRRIFYLSTALGIIPIIVTIFFI 328
                 4566666666666665577778888888877788888888888777777755555555557777777777777766666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       624  (0.0348039); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.21s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2738.55
//
Query:       KHJ30562.1  [L=542]
Description: putative t-complex protein 1 subunit epsilon [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.7e-157  525.0   6.0   1.9e-157  524.8   6.0    1.0  1  Cpn60_TCP1  TCP-1/cpn60 chaperonin family
     0.0043   16.9   0.4       0.64    9.8   0.0    3.0  2  CPT         Chloramphenicol phosphotransferase-like protein
  ------ inclusion threshold ------
       0.07   13.1   0.1       0.83    9.6   0.0    2.4  2  MIT_C       Phospholipase D-like domain at C-terminus of MIT


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  524.8   6.0  3.2e-161  1.9e-157       1     489 [.      43     535 ..      43     537 .. 0.98

  Alignments for each domain:
  == domain 1  score: 524.8 bits;  conditional E-value: 3.2e-161
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHHHHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPaakllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegyekale 99 
                 +a+i+kt+lGP+G+dK+l+++ g++++TnDGatil ++ei++++akllve+++sqd+e+GDGTt vv+Lag+Lle a++li++g+hp+++ +gy++a++
  KHJ30562.1  43 VAKILKTSLGPRGLDKILISPDGDITITNDGATILGQIEISNHLAKLLVELSRSQDDEIGDGTTGVVVLAGALLEHAAELIDKGIHPIKVADGYDQACD 141
                 689************************************************************************************************ PP

                 HHHHHHHHHXEEBXSCSTT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHHHCHCCCS.EECSCCCEECCCCEECECTTSEEESEEEESS--SSTTSSC CS
  Cpn60_TCP1 100 kaleaLkeiaveisseekdreeLlkvartslsskltskeaeelsklvvdAvklieene.keldlgrikvvkieggsledselveGlvldkgvlspdmpk 197
                  a+ +L++ia  i+ ++ +re+L+kvartsl+sk++sk  +++++++vdA++++ + e k++d++ ikv  + ggsleds l++G+++dk++++p+mp 
  KHJ30562.1 142 IAVAELDRIADVIEFTKTERENLVKVARTSLGSKIVSKAHDQFANIAVDAIMSVADLErKDVDFDLIKVDGKVGGSLEDSMLIQGVLVDKDFSHPQMPS 240
                 ***************************************************55555555**************************************** PP

                 EEECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECEEEESS-B-HHHHHHHHHCT-EEE-S--HHHHHHHHHHHT-- CS
  Cpn60_TCP1 198 klenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnvvvcqkgiddlalhflakngilalrrvkkkdlerlakatGat 296
                 +++nak+++l++ +e++k++tk++++++++ee++kl++ e++++ e++++i+++g+n+v+cq+g+dd+a+h+l +n++ a+r+v   ++e +a+at+++
  KHJ30562.1 241 EVRNAKIAILTCAFEPPKPKTKHKLDVTTVEEFKKLQNYEKEKFAEMVKQIKDTGANIVICQWGFDDEANHLLLQNKLPAVRWVGGPEIELIAIATNGR 339
                 *************************************************************************************************** PP

                 EBSCGGGGGCGC-EEEEEEEECCETT..CCEEEEECESSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHHHHCCCCT CS
  Cpn60_TCP1 297 avssledltpeelGtakkveeekigs..ekttiieevksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakklkeyaks 393
                 +v ++edl+p +lGta+ v+e ++g+  ek+++iee+++ +++t  +rg++++++de++r+++dAl+vv+n+i+d++vv+GGGa+e++++ ++++ a +
  KHJ30562.1 340 IVPRFEDLSPAKLGTAGIVRELSFGTtrEKMLVIEECANTRAVTAFIRGSNKMIIDEAKRSLHDALCVVRNLIRDNRVVYGGGASEISCSLAVENAAVK 438
                 ************************98779********************************************************************** PP

                 SXCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHHHHHHH.HTTXTTEEEETTTTCEEECCCCTXEEEHHHHHHHHHHHHHHHHHHHCEEEEEXX CS
  Cpn60_TCP1 394 vsgeeqlaieafakALevipktLaeNaGldpievlaklraah.nkgekelgidvesgeiidlveagvvDplkvkrqalksAteaastiLrideiika 489
                  +g eq+a++afa+AL +ip++LaeN+Gl+pie+la++++++  +g+  lg+d+ ++ + d++e  v+Dpl  krq l +At++ +++L+++ +i a
  KHJ30562.1 439 SPGIEQYAMRAFAEALDAIPMALAENSGLSPIETLANIKSRQvTEGNSRLGVDCLQKGTNDMKEIHVIDPLIGKRQQLMLATQLCRMVLKVNSVIIA 535
                 ****************************************88778888**********************************************987 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.1     0.011        64      47      95 ..     246     307 ..     166     326 .. 0.51
   2 !    9.8   0.0   0.00011      0.64      53     115 ..     362     421 ..     347     448 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.011
                 T..............STTSEEEETTSEEE-HHHHHHHHHHHHHHHHHHHTT-EEEEEE--TTT CS
         CPT  47 d..............eadglefeteleeigpeldlllaalyeavaamaraGnnvivDdvilek 95 
                 +               ++ l+ +t++e  +++ +   + ++e v+ + ++G+n+++ +   + 
  KHJ30562.1 246 KiailtcafeppkpkTKHKLDVTTVEE-FKKLQNYEKEKFAEMVKQIKDTGANIVICQWGFDD 307
                 044444444444443555566655544.56666666777788888888888888876555554 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00011
                 EEETTSEEE-HHHHHHHHHHHHHHHHHHHTT-EEEEEE--TTTHHHHHHHHHHHTTS-EEEEE CS
         CPT  53 efeteleeigpeldlllaalyeavaamaraGnnvivDdvilekewlvdllrrllsgldvllVG 115
                 +f t +e   ++l   + a ++av a+ r  n++i+D++  + +++  ++r+l+++ +v++ G
  KHJ30562.1 362 SFGTTRE---KMLVIEECANTRAVTAFIRGSNKMIIDEAKRSLHDALCVVRNLIRDNRVVYGG 421
                 5554444...66666677899******************9999999999**********9987 PP

>> MIT_C  Phospholipase D-like domain at C-terminus of MIT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.12   7.1e+02      45      82 ..     259     297 ..     242     310 .. 0.72
   2 ?    9.6   0.0   0.00014      0.83      10      44 ..     495     529 ..     491     538 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.12
       MIT_C  45 skklkkikLlTsede.eeedeqkenleelkesleklgie 82 
                 +k++ k++++T e+  + ++ +ke+++e+ ++++++g +
  KHJ30562.1 259 PKTKHKLDVTTVEEFkKLQNYEKEKFAEMVKQIKDTGAN 297
                 667788888888888444455778899888888877655 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00014
       MIT_C  10 kylddateikiedpYirarhqirnlvrllellvkk 44 
                 k  +d++ei++ dp i +r q+   ++l+ +++k 
  KHJ30562.1 495 KGTNDMKEIHVIDPLIGKRQQLMLATQLCRMVLKV 529
                 56689***************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (542 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.54
# Mc/sec: 2995.86
//
Query:       KHJ30563.1  [L=1162]
Description: putative mitochondrial translation initiation factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      9e-35  120.0   4.3    1.4e-32  112.8   4.3    3.2  2  GTP_EFTU     Elongation factor Tu GTP binding domain
    1.8e-23   82.7   0.8    4.9e-23   81.3   0.8    1.8  1  IF-2         Translation-initiation factor 2
    2.2e-10   40.6   0.1    5.8e-10   39.3   0.1    1.8  1  MMR_HSR1     50S ribosome-binding GTPase
    5.6e-07   29.9   0.5     0.0022   18.4   0.1    3.0  2  GTP_EFTU_D2  Elongation factor Tu domain 2
    0.00097   19.1   2.5      0.057   13.3   0.1    2.9  3  RsgA_GTPase  RsgA GTPase
     0.0017   17.8   0.0     0.0047   16.4   0.0    1.7  1  SRPRB        Signal recognition particle receptor beta subuni
     0.0021   17.9   0.5      0.016   15.1   0.1    2.4  2  GTP_EFTU_D4  Elongation factor Tu domain 4
     0.0031   17.0   0.0     0.0061   16.0   0.0    1.4  1  Arf          ADP-ribosylation factor family
     0.0031   17.1   0.1      0.008   15.7   0.1    1.7  1  FeoB_N       Ferrous iron transport protein B
     0.0033   17.2   0.3      0.011   15.5   0.3    1.9  1  PduV-EutP    Ethanolamine utilisation - propanediol utilisati
     0.0036   16.3   0.6     0.0075   15.3   0.6    1.4  1  MeaB         Methylmalonyl Co-A mutase-associated GTPase MeaB
      0.006   16.4   0.0      0.014   15.2   0.0    1.7  1  IF2_N        Translation initiation factor IF-2, N-terminal r
  ------ inclusion threshold ------
       0.02   15.1   0.0      0.044   14.0   0.0    1.6  1  Roc          Ras of Complex, Roc, domain of DAPkinase
          6    7.3   0.0          6    7.3   0.0    4.3  2  AAA_23       AAA domain


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.27   3.4e+02     111     179 ..     213     285 ..     209     323 .. 0.66
   2 !  112.8   4.3   1.1e-35   1.4e-32       6     191 ..     628     786 ..     624     792 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.27
                 HHHHHHHHHHTTTEEEEEEES.CGSTHHHHHHHHHHH.HHHHHHH....HHHHHHHHHTTT......TTEEEEEEBTTTTB CS
    GTP_EFTU 111 teevlrlalkegvpiivfiNK.mDrlkaelkeiveev.kqklsrk....eeklekygekge......kevpvvfgSalkge 179
                  e+ + l++++gv ++ ++N  +Dr ++ + e  +e  + +l++     +e+        e      +++p++  S+++ +
  KHJ30563.1 213 LEQSWSLLKRRGVTPVPVLNPvVDRSRDPMAERDREErEANLKNFavdrKER--------EreaefrRFTPLIGHSSFQED 285
                 578899999***********73699944444433333033332222221222........022233357777777777665 PP

  == domain 2  score: 112.8 bits;  conditional E-value: 1.1e-35
                 EEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETT CS
    GTP_EFTU   6 igiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisleketkkylinliDtPGHvdFskevirglrvlDgavlvvdav 104
                 ++i+ghvDhGKtTL+d L +++ a s                  +  giT ++ a s+    + + i+++DtPGH+ F +   rg+ v+D++vlvv+a+
  KHJ30563.1 628 VTIMGHVDHGKTTLLDYLRKSSVAAS------------------EHGGITQHIGAFSVR-MPTGKMITFLDTPGHAAFLNMRQRGAYVTDIVVLVVAAD 707
                 89****************95555433..................467************.8999*********************************** PP

                 TBSTHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTBTHHHHHHHHHHH CS
    GTP_EFTU 105 eGvepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqklsrkeeklekygekgekevpvvfgSalkgegvktllealvel 191
                 +Gv+pqt e +++a++ +vpiiv+iNK+D+++ ++++++ ++ ++       +e   + g  +++vv++S+ +geg++++ e+++ l
  KHJ30563.1 708 DGVKPQTMEAIKHAKAAKVPIIVAINKIDKPDINIDKVKLDLARHG------VEIEDFGG--DTQVVCVSGQTGEGIDKFEETVMAL 786
                 *******************************************888......77777777..499*************998888765 PP

>> IF-2  Translation-initiation factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.3   0.8   3.8e-26   4.9e-23       7     104 ..     947    1046 ..     942    1047 .. 0.92

  Alignments for each domain:
  == domain 1  score: 81.3 bits;  conditional E-value: 3.8e-26
                  CCCSCS..SCCEEEEEESSHHHHHHHHHHHHCTT.SSTEEEECEEEESSB-HHHHHHHHHSTEEEEEESSSCTHHHHHCCCCCTSEEEEESSHHHHH CS
        IF-2    7 eikeeg..kelnviikaDvqGsleAlkeaLekleseevkvkvihsgvGaitesDvelasasnaiiigFnvkvskkakklaekegvkirlynvIYkli 101 
                  + k+++  + + +i+k+Dv+Gs+eA+k+ ++ l+++ev+  v++sgvG++++ D+e+a a+++ ++ Fn +vs+++  lae ++v+i+++n+IY l+
  KHJ30563.1  947 QKKKSErpSIVYFIVKGDVSGSIEAIKDQISLLKTKEVEPVVLRSGVGKVSKFDIEHAGAAKGYVVSFNQSVSPDIYHLAEGSKVRIFENNIIYALV 1043
                  3343334688999********************99************************************************************** PP

                  HHH CS
        IF-2  102 ddv 104 
                  d +
  KHJ30563.1 1044 DSI 1046
                  *87 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.3   0.1   4.6e-13   5.8e-10       2     114 .]     628     734 ..     627     734 .. 0.83

  Alignments for each domain:
  == domain 1  score: 39.3 bits;  conditional E-value: 4.6e-13
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEE.ETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvk.lkgkeielvDtpGliegaseekglgkaflaleeadlillvvdaseeklkpldeelee 99 
                 v i+G+   GK+tL+  l ++ + +s++ g T++i  + v+   gk i+++DtpG  +       l+ + +    +d+++lvv a  +++kp+  e  +
  KHJ30563.1 628 VTIMGHVDHGKTTLLDYLRKSSVAASEHGGITQHIGAFSVRmPTGKMITFLDTPG--H----AAFLNMRQRGAYVTDIVVLVVAAD-DGVKPQTMEAIK 719
                 789***********************************999555699********..3....122222222233369999999876.78*9*9999999 PP

                 HHHHTTSEEEEEEES CS
    MMR_HSR1 100 lleeakkplilvlnk 114
                   + ak p+i+++nk
  KHJ30563.1 720 HAKAAKVPIIVAINK 734
                 9999*********98 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0019       2.4       1      65 [.     813     867 ..     813     874 .. 0.73
   2 !   18.4   0.1   1.7e-06    0.0022       3      72 ..    1084    1149 ..    1083    1151 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0019
                  EEEEEEEEEESEEETTEEEEEECTCTTSEEEEEEEEEEEEETEEESEEETTSEEEEEEEESSCCS CS
  GTP_EFTU_D2   1 GtvalgrvysGtlkkGdevrilgndtskkeivtrissletfhededeavaganaGvivaikgled 65 
                  G va++ v +Gtl++G+ ++            t+ s++ ++++++ +++ +a  G+ v i+g  d
   KHJ30563.1 813 GKVATILVRRGTLRPGQVLVA--G--------TTWSRVRVMRNEMGTEISEAGPGFPVEIDGWRD 867
                  89***************9998..5........455566666666667777777777777777666 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 1.7e-06
                   EEEEEEEESEEETTEEEEEEC.TCTTSEEEEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCE CS
  GTP_EFTU_D2    3 valgrvysGtlkkGdevrilg.ndtskkeivtrissletfhededeavaganaGvivaikgledaiivGdt 72  
                   +a+++v +G +k++ +vr+++  +       ++ ssl t ++d++++ +g  +G+   + g ++  +vGd 
   KHJ30563.1 1084 IAGCKVRNGLIKRNCKVRVIRqGKNI---FEGELSSLKTGKKDVQQVSKGNECGLAFTG-GWSE-FEVGDL 1149
                   689999*************7755554...55************************9997.7777.688875 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.1     0.019        25      99     160 ..     625     682 ..     620     688 .. 0.69
   2 !   13.3   0.1   4.4e-05     0.057      10      97 ..     690     783 ..     683     790 .. 0.79
   3 ?   -2.5   0.0       3.1     4e+03      95     114 ..     977     997 ..     939     998 .. 0.56

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.019
                  TSEEEEECSTTSSHHHHHHHHCTT-----S--------------SEEEEEETTTEEEESS-S CS
  RsgA_GTPase  99 dktsvlvGqSGvGKStLinallpelelktgevseklgrGkhTTtavellelaegglliDtPG 160
                    +++++G+   GK+tL++ l+ +      + se+ g  +h    +  ++  +  +  DtPG
   KHJ30563.1 625 PPIVTIMGHVDHGKTTLLDYLRKSSV----AASEHGGITQHIGAFSVRMPTGKMITFLDTPG 682
                  568899***************99832....33555555555555555555555555566666 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 4.4e-05
                  TTTEES--EEEEEEESTTTT--HHHHHHHHHHHHHTT-EEEEEEE-GGG--HHH.....HHHHHHHHHHHTT..SEEEE--TTTHTTHHHHHHHC CS
  RsgA_GTPase  10 rpkvaNvdqllivvslkepelslnlldrfLvlaeekgiepvivlnKiDlleeee.....eleelkeelealg..yevllvsaktkegleelkell 97 
                  r++ a v+ ++++v ++++ +++++++ ++ +a+++++++++++nKiD  + +      +l +   e+e++g  ++v++vs +t+eg+++ +e +
   KHJ30563.1 690 RQRGAYVTDIVVLVVAADDGVKPQTME-AIKHAKAAKVPIIVAINKIDKPDINIdkvklDLARHGVEIEDFGgdTQVVCVSGQTGEGIDKFEETV 783
                  667788988887777777999999987.789*****************97766555667667777777777655789999999999999988765 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 3.1
                  HHCTT.SEEEEECSTTSSHHH CS
  RsgA_GTPase  95 ellkd.ktsvlvGqSGvGKSt 114
                  +llk  ++  +v  SGvGK +
   KHJ30563.1 977 SLLKTkEVEPVVLRSGVGKVS 997
                  333443667777889999965 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   3.7e-06    0.0047       4      90 ..     626     713 ..     624     751 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 3.7e-06
                 -EEEEE-STTSSHHHHHHHHHHSS---B---S..S-EEETTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HH CS
       SRPRB   4 pavllvGlsdsGKTslftrLttdsvkktvtSq..essaalkvksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpk 90 
                 p+v ++G  d GKT+l+  L + sv  +      +   a +v+   g+++t++D PGh  +  ++ ++  + + +  lv   D  ++p+
  KHJ30563.1 626 PIVTIMGHVDHGKTTLLDYLRKSSVAASEHGGitQHIGAFSVRMPTGKMITFLDTPGHAAFL-NMRQRGAYVTDIVVLVVAADDGVKPQ 713
                 6899******************98887766543344445666779*************9874.44555455555555555556666555 PP

>> GTP_EFTU_D4  Elongation factor Tu domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.78     1e+03      21      64 ..     816     858 ..     799     863 .. 0.69
   2 !   15.1   0.1   1.3e-05     0.016      15      73 ..    1079    1140 ..    1069    1151 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.78
                  EEEEEEEEEEETT-EEEETTE.EEEEEEEEEET.TEEESEEETT- CS
  GTP_EFTU_D4  21 vGvevlgGvikpgvklikedGrevGeilqiqdk.gkkleeakaGq 64 
                    + v  G+++pg  l+   G++  +++ ++++ g +++ea  G 
   KHJ30563.1 816 ATILVRRGTLRPGQVLVA--GTTWSRVRVMRNEmGTEISEAGPGF 858
                  4567999******99975..7777777777654256777776665 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 1.3e-05
                   TCCCEEEEEEEEEEEEETT-EE.EETTE.EE..EEEEEEEETTEEESEEETT-EEEEEEESS CS
  GTP_EFTU_D4   15 rsdpaivGvevlgGvikpgvkl.ikedGrev..GeilqiqdkgkkleeakaGqevaisiegk 73  
                   r+++ i G +v +G ik ++k+ + ++G+++  Ge++++++ +k ++++++G+e +++  g 
   KHJ30563.1 1079 RKRDPIAGCKVRNGLIKRNCKVrVIRQGKNIfeGELSSLKTGKKDVQQVSKGNECGLAFTGG 1140
                   4566699**********9998855679***999*********************99988876 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   4.8e-06    0.0061      19     166 ..     630     778 ..     626     786 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 4.8e-06
                 EEESTTSSHHHHHHHHHHSSCEE...CSSSSSEEEEEEEETTEE.EEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHCTSGCC CS
         Arf  19 llGLDnaGKtTilkklkleelvt...tvPTigfnveeleiknlk.ftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeel 113
                 ++G    GKtT+l  l++ +++       T++    ++++ + k +t+ D  G+    ++ ++    td v+ vv + d       k +  + +++ + 
  KHJ30563.1 630 IMGHVDHGKTTLLDYLRKSSVAAsehGGITQHIGAFSVRMPTGKmITFLDTPGHAAFLNMRQRGAYVTDIVVLVVAADDGV-----KPQTMEAIKHAKA 723
                 6677778*********999988733234588888888888555416778***********99999999*999999888765.....44445668999** PP

                 TTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSS...SSSSEEEEEEBTTTTBTHHH CS
         Arf 114 kevallvlaNKqDlpealseeelrellgleelk...gkrkleiqkcsavkgeglke 166
                 ++v+++v  NK+D p+ ++ ++++  l+ + ++      + +++ +s  +geg+++
  KHJ30563.1 724 AKVPIIVAINKIDKPD-INIDKVKLDLARHGVEiedFGGDTQVVCVSGQTGEGIDK 778
                 *************986.677888888888877644545678888999999999876 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   6.2e-06     0.008       3     154 ..     628     781 ..     627     783 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 6.2e-06
                 EEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEEEEEEETT.EEEEEEE----SSSSSSSHHHHHHHHHHHCTSSSEEEEEEEGGGHHHHHHHHHH CS
      FeoB_N   3 valvGnpnvGkttlfnaltgakqkvgNwpGvtvekkegklklkg.keveivDlPGiYslsayseeekvardflleeepdvvvnvvdatnlernLyLtlq 100
                 v+++G  + Gkttl++ l +++   + + G+t      ++++ + k ++++D PG  ++ ++ +    ++d+++     +vv  +d     +++  +  
  KHJ30563.1 628 VTIMGHVDHGKTTLLDYLRKSSVAASEHGGITQHIGAFSVRMPTgKMITFLDTPGHAAFLNMRQRGAYVTDIVV-----LVVA-ADDGVKPQTMEAIKH 720
                 6789****************************999998888865599*********999988888777777664.....3444.444445677888889 PP

                 HHHTTSSEEEEEETHHH..HHHTTEEE-HHHHHHHH...T..S-EEEEBTTTTBTHHHHHH CS
      FeoB_N 101 llelgvpvvlalnmide..aekkgieidlkkLsekL...g..vpvvktsakkkegieellk 154
                     +vp+++a+n+id+  ++ +++++dl++   ++   g  ++vv +s++++egi+++ +
  KHJ30563.1 721 AKAAKVPIIVAINKIDKpdINIDKVKLDLARHGVEIedfGgdTQVVCVSGQTGEGIDKFEE 781
                 99999**********9722444555566555443332222346788888888888888766 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.3   8.3e-06     0.011       4     137 ..     628     779 ..     626     785 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 8.3e-06
   PduV-EutP   4 illiGkvgsGKttLtqalkgeelkYkk....tqaiefsd.........eviDtPGeylenrklysalivtsaeadvialvqdat...eeesvfppgfas 86 
                 + ++G+v+ GKttL   l++ ++  +     tq i   +         +++DtPG       + +  +  ++ +d+++lv++a+   +++++ + + a+
  KHJ30563.1 628 VTIMGHVDHGKTTLLDYLRKSSVAASEhggiTQHIGAFSvrmptgkmiTFLDTPGH----AAFLNMRQRGAYVTDIVVLVVAADdgvKPQTMEAIKHAK 722
                 679*****************877655433448887654312222221135799995....455566677788889999998886222566667778889 PP

   PduV-EutP  87 vfnkeviGiitkidlaedeenieaveelLksaGae........kifevsavekegieel 137
                   + ++i  i kid++  + ni++v+  L   G+e        ++ +vs  + egi++ 
  KHJ30563.1 723 AAKVPIIVAINKIDKP--DINIDKVKLDLARHGVEiedfggdtQVVCVSGQTGEGIDKF 779
                 99999********999..77888888888887775322222226777777777777766 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.6   5.9e-06    0.0075     142     234 ..     696     792 ..     691     799 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 5.9e-06
                 T-SEEEEEEESSTTTT...TTT--CC.CHHH-SEEEEE---HHHHHHHHHHHHHHHHHCSTTBTTB--EEEEEBCCCTBSHHHHHHHHHHHHHHHHH CS
        MeaB 142 vvdtfvvlllpeaGDe...lqgikkG.ileiaDiivvnkaDkkeaekaarelraaleleeekekeWrpkvlktsavegeGidelvdaieehrevlkk 234
                 v+d++v+++ ++ G +   + +ik+     +  i+++nk Dk++++  + +l  a +  e ++ +  ++v+ +s+++geGid++ +++   +e+l+ 
  KHJ30563.1 696 VTDIVVLVVAADDGVKpqtMEAIKHAkAAKVPIIVAINKIDKPDINIDKVKLDLARHGVEIEDFGGDTQVVCVSGQTGEGIDKFEETVMALAEILDM 792
                 678888888877775511144566442567888999****************************************************999888765 PP

>> IF2_N  Translation initiation factor IF-2, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.1e-05     0.014       1      54 []     546     598 ..     546     598 .. 0.95

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.1e-05
       IF2_N   1 mskirVyeLAkeLgvkskevikkLfkelGievkshsssLDeetaeliaeefgik 54 
                 +++i+V +LA  ++++ +++ +k+ k+lG+e   ++ +L  e   lia e++++
  KHJ30563.1 546 PEFITVANLAMAIKIRYEDLATKM-KQLGFEEIYPDFILNSENSGLIAMEYKFE 598
                 589*********************.77***********************9975 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   3.4e-05     0.044       2     120 .]     628     737 ..     627     737 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.4e-05
                 EEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEEGHHHHCHHHHHH CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvydsrssenlkeWlk 100
                 v ++G    GKt+ll+ + ++++  +e+  i   +      +++      + k   + + Dt G+  f ++++      ++++lv+ +++     + ++
  KHJ30563.1 628 VTIMGHVDHGKTTLLDYLRKSSVAASEHGGITQHIGAF---SVRMP----TGK--MITFLDTPGHAAFLNMRQRGAYVTDIVVLVVAADDGV-KPQTME 716
                 5689999************9999877765444444332...33332....223..57899***********986666666666666543322.234466 PP

                 HHHHH.CSSS-EEEEEE-TTT CS
         Roc 101 elkkv.agkspvilvgnkiDl 120
                  +k+  a k p+i+ +nkiD+
  KHJ30563.1 717 AIKHAkAAKVPIIVAINKIDK 737
                 666541667899999****95 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0    0.0047         6      13      39 ..     619     645 ..     614     646 .. 0.88
   2 ?   -1.7   2.3       2.6   3.4e+03     154     192 ..     896     976 ..     866     983 .. 0.42

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0047
      AAA_23  13 qeidFskgltlItGpNGaGKTTildAi 39 
                 +e+ + ++++ I G+   GKTT+ld +
  KHJ30563.1 619 TELPLRPPIVTIMGHVDHGKTTLLDYL 645
                 678899******************976 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 2.6
      AAA_23 154 rleelekeleeledekkllekl...........................eqekekek...............eleeleeel 192
                 + ++l  ++e ++ +++ l+++                            ++k+k +                +e++++++
  KHJ30563.1 896 ERDKLAADMEAINRTRDNLRQQkvlaniareaeedeenigihqnppadlSKQKKKSErpsivyfivkgdvsgSIEAIKDQI 976
                 222222222222222222222222222222222233444444555555422222222455555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       913  (0.0509231); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.85u 0.32s 00:00:01.17 Elapsed: 00:00:00.49
# Mc/sec: 7126.59
//
Query:       KHJ30564.1  [L=253]
Description: hypothetical protein EV44_g5776 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.026   14.3   0.1       0.08   12.7   0.0    1.8  2  Pox_VLTF3  Poxvirus Late Transcription Factor VLTF3 like


Domain annotation for each model (and alignments):
>> Pox_VLTF3  Poxvirus Late Transcription Factor VLTF3 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   4.5e-06      0.08      29      72 ..     128     170 ..      87     180 .. 0.85
   2 ?   -1.7   0.1      0.12   2.1e+03      72      93 ..     188     209 ..     184     219 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4.5e-06
   Pox_VLTF3  29 iseevldelkkklkkknisikevtkakvlkiLKelglkklyedv 72 
                 i++ +l+++++ +++ n  +++v+k+ ++++LK+l ++++++d 
  KHJ30564.1 128 IPT-ILQAVDEVFRASNFAMASVSKKWIKNYLKSLMREEFQRDE 170
                 666.*******************************999998876 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.12
   Pox_VLTF3  72 vklIleiltgkrpdklssleek 93 
                 +k++   lt++  dk+++l+++
  KHJ30564.1 188 IKTVASCLTNIYRDKIQELNKE 209
                 5667777777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       936  (0.0522059); expected 358.6 (0.02)
Passed bias filter:                      630  (0.0351386); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 1753.71
//
Query:       KHJ30565.1  [L=465]
Description: putative scp-like extracellular protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-07   30.8   0.0      8e-07   29.9   0.0    1.5  1  CAP       Cysteine-rich secretory protein family


Domain annotation for each model (and alignments):
>> CAP  Cysteine-rich secretory protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0   4.5e-11     8e-07       2      80 ..     338     417 ..     337     440 .. 0.76

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 4.5e-11
                 HHHHHHHHHTT----EE-HHHHHHHHHHHHHHHHH..T---S-GGG--HHHHHHTT-TEEEEEES--CCCHHHHHHTSHH CS
         CAP   2 eahNeyRaaaglppLkwdatLekaAqdhardcaash.sdsssspeggdllkyaenagkeniaaaseaaedavdsWysepg 80 
                   hN +R+++  + L+w++tL+k A + a++c   h  + ++  +g++l  y  + g +  +  +  a ++ ++Wy++++
  KHJ30565.1 338 KFHNIHRTNHSSSDLAWNSTLAKFALETAKTCIFEHdFTPGDGDYGQNLAVYGSSLGVKSLDKTELLADSITNKWYNSEF 417
                 67******************************8866544444555555555555555235555555599999******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (465 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3553.41
//
Query:       KHJ30566.1  [L=308]
Description: putative tyrosine-protein phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-23   82.3   0.0      4e-23   81.7   0.0    1.3  1  DSPc           Dual specificity phosphatase, catalytic domain
     0.0023   17.6   0.0      0.004   16.7   0.0    1.4  1  Y_phosphatase  Protein-tyrosine phosphatase
     0.0057   17.0   0.0       0.01   16.2   0.0    1.4  1  Init_tRNA_PT   Rit1 DUSP-like domain


Domain annotation for each model (and alignments):
>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.7   0.0   6.8e-27     4e-23      10     131 ..      11     137 ..       4     139 .. 0.86

  Alignments for each domain:
  == domain 1  score: 81.7 bits;  conditional E-value: 6.8e-27
                 CHHHHHHHTCSEEEEESSSSSECECCTTTTSEEEEECCESSTTSCCGGGHHHHHHHHHHHHHTT-E.....EEEEESSSSSHHHHHHHHHHHHHHTS.C CS
        DSPc  10 slallsklgitlvinvtkevpnanalkkseieklripvedehetkiskyleeavefidkakqkgkk.....vlVHCqaGisRSatliiaYlmktknl.s 102
                 +++ l+k  +t+++ v+k +   +  + +e+++l+i v+d +++++ + +e++++ i++a ++g++     vlVHC++GisRS t+++aYl++++   +
  KHJ30566.1  11 KKEYLQKAAVTHIVSVMKYNFI-RYEHLQEYQHLQIEVDDIESENLLESFERISSWIKEALKDGNNgkpgvVLVHCAMGISRSVTVVLAYLLRENPTlE 108
                 4788999**********65554.55589*******************************955443222454**********************99655* PP

                 HHHHHHHHHHHSTT-SSTHHHHHHHHHHH CS
        DSPc 103 lneayeflkerrpaispnagfirqLleye 131
                 +++a++++++ r +  pn gfi+qL  y+
  KHJ30566.1 109 VDDALSLVRKTRLKADPNGGFIAQLKLYK 137
                 *************************9987 PP

>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   6.7e-07     0.004     147     216 ..      54     120 ..       3     124 .. 0.55

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 6.7e-07
                    SSGSCCHHHHHHHHHHHHHH.STTSS-EEEECSSSSHHHHHHHHHHHHHHHHHHHSEEEHHHHHHHHHTTS CS
  Y_phosphatase 147 gvpesaksllklirkveksk.eaksgpvvVhCsaGvgRtgtfvaldillqqleaeeevdvlqivkelrkqR 216
                    +  es +++ + i+++ k+  + k g v+VhC  G++R+ t+v++ +l +  +    ++v ++++ +rk R
     KHJ30566.1  54 NLLESFERISSWIKEALKDGnNGKPGVVLVHCAMGISRSVTVVLAYLLRENPT----LEVDDALSLVRKTR 120
                    23355566666666666666566777899**********88776655444333....45555555555555 PP

>> Init_tRNA_PT  Rit1 DUSP-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.7e-06      0.01       3      60 ..      41     101 ..      39     122 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.7e-06
  Init_tRNA_PT   3 lelklgsgKkgsknLrtalpkivdfvrkrlsedkk...kkilvacetGkdlsvgvaLailc 60 
                    +l+++    +s+nL + +++i +++++ l+++++     +lv+c+ G + sv v+La l 
    KHJ30566.1  41 QHLQIEVDDIESENLLESFERISSWIKEALKDGNNgkpGVVLVHCAMGISRSVTVVLAYLL 101
                   57788888889*********************988888779****************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       846  (0.0471861); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2239.82
//
Query:       KHJ30567.1  [L=157]
Description: hypothetical protein EV44_g3728 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.019   15.0   0.8      0.048   13.7   0.8    1.6  1  AlphaC_C  AlphaC  C-terminal


Domain annotation for each model (and alignments):
>> AlphaC_C  AlphaC  C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.8   2.7e-06     0.048      24      60 ..      87     123 ..      84     130 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.7e-06
    AlphaC_C  24 kvlisleiikkdidnnPktqsdiankiievtelekkl 60 
                 +v+ sl+  k+++ nnPkt+ + +n  i+    e ++
  KHJ30567.1  87 EVIESLQKAKTNLRNNPKTKRADENIKIDTIRQEIRI 123
                 7999***************988877555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       921  (0.0513693); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1135.67
//
Query:       KHJ30568.1  [L=97]
Description: hypothetical protein EV44_g4256 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                         7  (0.000390429); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.39
# Mc/sec: 748.61
//
Query:       KHJ30569.1  [L=217]
Description: putative peroxisomal membrane anchor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00051   19.6   6.9    0.00075   19.1   6.9    1.2  1  Golgin_A5       Golgin subfamily A member 5
  ------ inclusion threshold ------
      0.012   15.7   3.9       0.68   10.0   0.9    2.2  2  Baculo_PEP_C    Baculovirus polyhedron envelope protein, PEP,
      0.017   15.0   7.3       0.48   10.3   0.4    2.2  2  CdvA            CdvA-like coiled-coil domain
      0.019   14.9   4.4      0.019   14.9   4.4    2.1  2  Apolipoprotein  Apolipoprotein A1/A4/E domain
      0.028   14.7   4.7      0.044   14.1   4.7    1.3  1  MBR1            Mitochondrial biogenesis regulation protein 1
      0.034   14.0   2.4      0.048   13.5   2.1    1.4  1  MCPVI           Minor capsid protein VI
      0.042   13.2   7.7      0.059   12.7   7.7    1.2  1  SF-assemblin    SF-assemblin/beta giardin
      0.043   11.3   7.8      0.053   11.0   7.8    1.1  1  DUF3584         Protein of unknown function (DUF3584)
      0.058   13.5   4.5       0.18   11.9   4.5    1.8  1  Med9            RNA polymerase II transcription mediator comp
      0.059   13.2   0.1       0.21   11.4   0.0    1.9  2  HTH_IclR        IclR helix-turn-helix domain
      0.097   11.5   9.2       0.15   10.9   9.2    1.2  1  Spc7            Spc7 kinetochore protein
       0.11   12.8   0.9        2.7    8.3   0.1    2.4  2  GST_C           Glutathione S-transferase, C-terminal domain
       0.14   10.9   3.5       0.18   10.5   3.5    1.1  1  BshC            Bacillithiol biosynthesis BshC
       0.17   11.8   1.9       0.24   11.3   1.9    1.2  1  DUF4435         Protein of unknown function (DUF4435)
        0.2   12.3   2.8        3.1    8.4   2.2    2.3  2  GTP-bdg_M       GTP-binding GTPase Middle Region
        0.2   11.0   6.4       0.37   10.1   6.0    1.5  1  Cluap1          Clusterin-associated protein-1
       0.26   11.9   7.9       0.35   11.5   5.7    2.1  3  YabA            Initiation control protein YabA
       0.29    9.1   6.0       0.66    7.9   4.3    1.8  2  Prominin        Prominin
       0.44    9.7   4.4       0.81    8.9   4.4    1.5  1  TMPIT           TMPIT-like protein
       0.44   10.3   8.6        1.6    8.5   8.1    1.8  2  SKA1            Spindle and kinetochore-associated protein 1
       0.66    8.8   3.2       0.73    8.7   3.2    1.2  1  LMBR1           LMBR1-like membrane protein
       0.67   10.3   7.0       0.49   10.8   5.0    1.8  2  YlqD            YlqD protein
        0.8    9.7  11.0        7.7    6.5  11.0    2.3  1  DUF1043         Protein of unknown function (DUF1043)
       0.86    9.8  12.6        0.4   10.9   9.6    1.8  1  TMF_TATA_bd     TATA element modulatory factor 1 TATA binding
        1.1    9.7   6.7        4.2    7.9   1.4    2.5  3  DUF4208         Domain of unknown function (DUF4208)
        1.4    7.4   5.7        2.4    6.7   5.7    1.4  1  FapA            Flagellar Assembly Protein A
          2    8.2   8.1       0.36   10.7   0.6    2.1  2  HeLo            Prion-inhibition and propagation
        2.3    8.5  11.1        4.1    7.7  11.1    1.5  1  zf-C4H2         Zinc finger-containing protein
        2.5    8.2   6.9        9.9    6.2   1.7    2.3  2  DUF1664         Protein of unknown function (DUF1664)
        2.9    7.6  14.8        5.4    6.8  14.8    1.6  1  ERM             Ezrin/radixin/moesin family
        4.4    8.2  10.5         11    7.0   7.7    2.8  2  M               M protein repeat
        5.1    6.5   7.8       0.65    9.4   3.0    1.9  2  HNOBA           Heme NO binding associated


Domain annotation for each model (and alignments):
>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   6.9   1.3e-06   0.00075      51     164 ..      25     142 ..      18     148 .. 0.89

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1.3e-06
   Golgin_A5  51 elkqerdllreelqklnqqieqlrtelqdleaqqqaeaeslreqlqeleeqleeerkakeeveaelerlkeelryle....eelvrskatlqsrikdre 145
                 +++q+++++ e+ +k+ + ++ql ++ +dl+ ++q+ +++l   l+e+e++l++ ++++++ e+e +r+++e++ l+    + + ++k+t++s++k+ +
  KHJ30569.1  25 QIEQDKKAIDESFEKVFSLLDQLAKDTEDLKLSEQNRTSKLDVALNEVESTLSNLKSSSRRREEESRRITDEVHGLRnlipKAMEEQKETTESQLKELN 123
                 68999*************************************************9999999***********98766222268899************* PP

   Golgin_A5 146 keieklrnqlttkslssss 164
                 +e+++l+  l ++ +s+ s
  KHJ30569.1 124 AELKSLKLLLGQRINSTVS 142
                 *******999888887765 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.9    0.0012      0.68      35     100 ..      25      82 ..      21      83 .. 0.58
   2 ?    6.5   0.1     0.015       8.2      32      70 ..     104     142 ..      91     149 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0012
  Baculo_PEP_C  35 qlatlldaietqLnalsedlksllaeldtrldtlltnLtdalnalqdtlrneLtnlnsiltnLlss 100
                   q++++++ai+++++++ + l        ++l++ ++ L+ + ++ + +l+ +L+ ++s l+nL ss
    KHJ30569.1  25 QIEQDKKAIDESFEKVFSLL--------DQLAKDTEDLKLSEQNRTSKLDVALNEVESTLSNLKSS 82 
                   45555555555555544444........45666666666666666667777777777777777665 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.015
  Baculo_PEP_C  32 ilaqlatlldaietqLnalsedlksllaeldtrldtllt 70 
                   i  ++++++++ e+qL++l+++lksl   l +r++++++
    KHJ30569.1 104 IPKAMEEQKETTESQLKELNAELKSLKLLLGQRINSTVS 142
                   556889999999999999999999998888888887765 PP

>> CdvA  CdvA-like coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   1.6    0.0045       2.5      15      69 ..      28      82 ..      24      87 .. 0.88
   2 ?   10.3   0.4   0.00086      0.48      17      51 ..     105     139 ..      92     146 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0045
        CdvA 15 ipkstyeeikekleealkklkekakelkeklkkrlkeledqikslekalanlkis 69
                 +k++ +e  ek+ + l++l ++ ++lk   ++r+++l+  ++++e++l nlk s
  KHJ30569.1 28 QDKKAIDESFEKVFSLLDQLAKDTEDLKLSEQNRTSKLDVALNEVESTLSNLKSS 82
                56677777778888999***********************************976 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00086
        CdvA  17 kstyeeikekleealkklkekakelkeklkkrlke 51 
                  +++ee ke  e++lk+l+++ k lk  l +r+++
  KHJ30569.1 105 PKAMEEQKETTESQLKELNAELKSLKLLLGQRINS 139
                 5689999*************************986 PP

>> Apolipoprotein  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.3      0.78   4.4e+02      19      93 ..      43      54 ..      25      76 .. 0.48
   2 ?   14.9   4.4   3.4e-05     0.019       4      77 ..      67     139 ..      61     158 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.78
                    CHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCHHCC CS
  Apolipoprotein 19 qlaplaqelrdrlskeleelrarlraeleevrarlepyrdevqeqlgqnleelrqrlapyteelrerlaadaeel 93
                     l +la+                                                               d+e+l
      KHJ30569.1 43 LLDQLAK---------------------------------------------------------------DTEDL 54
                    2222222...............................................................22222 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 3.4e-05
                     HCCCCHHHHHCCHHHCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCH CS
  Apolipoprotein   4 esldelkayaeeleeqlaplaqelrdrlskeleelrarlraeleevrarlepyrdevqeqlgqnleelrqrlap 77 
                       l+e+++++++l++   +  +e+  r+++e  +lr+ + + +ee+++  e+++ e++++l++    l qr+++
      KHJ30569.1  67 VALNEVESTLSNLKSSSRR-REEESRRITDEVHGLRNLIPKAMEEQKETTESQLKELNAELKSLKLLLGQRINS 139
                     5678888888888888777.478*************************************99877777777766 PP

>> MBR1  Mitochondrial biogenesis regulation protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   4.7   7.8e-05     0.044      19     136 ..      50     198 ..      42     204 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 7.8e-05
        MBR1  19 DteDeekelaselsssDeelsplkeillslsevkieeesengnvgevn..........slssndpldektsrr.......................... 81 
                 DteD + + +++ s+ D  l++++++l +l++++  +e+e+ ++ +            + ++++ +++    +                          
  KHJ30569.1  50 DTEDLKLSEQNRTSKLDVALNEVESTLSNLKSSSRRREEESRRITDEVhglrnlipkaMEEQKETTES----Qlkelnaelkslklllgqrinstvsan 144
                 99999999999999999999999999999988887777777666544457766655542222222222....144557788888888876554444433 PP

        MBR1  82 .qnlrkikTapya......pnsiseestssntqilrkkekrseseess..fllrnsrrnSssfi 136
                  +          +      p++ s++++++  + l++ e++s+  +s   ++l n r nSs+++
  KHJ30569.1 145 sS----------PlgrslaPTATSPTPQAPTETSLTEAEDKSSEPSSEvqVFLTNTRFNSSKLV 198
                 30..........2445555666666666666666666555555544445789*********975 PP

>> MCPVI  Minor capsid protein VI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   2.1   8.6e-05     0.048     100     177 ..     100     187 ..      54     215 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 8.6e-05
                 XXXXXXXXXXXXXXXXXXX.XXXXXXXX.......XXXXXXX.XXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXX CS
       MCPVI 100 leklkrkalGeerpatqeeleaLiaald.......pkdeeav.kqgeptvePiaPeaksvl..vPvtldlpesvdevkkPvlssesav 177
                 l +l +ka+ e++++t+ +l++L a+l+        + +  v +++ p  + +aP+a+s+    P++ +l e+ d+ ++P+   +   
  KHJ30569.1 100 LRNLIPKAMEEQKETTESQLKELNAELKslklllgQRINSTVsANSSPLGRSLAPTATSPTpqAPTETSLTEAEDKSSEPSSEVQVFL 187
                 378899**************99998888666777534444442678999*********98666**************99986655444 PP

>> SF-assemblin  SF-assemblin/beta giardin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   7.7    0.0001     0.059       8     103 ..      34     139 ..      27     146 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.0001
  SF-assemblin   8 erltervegfekelenEieqkrvdektrvklikeaiaklek...sveaEvkkRaesdkdiqeefk.......keikklqekikeevddlalelkkav 94 
                   ++  e+v  + ++l ++ e  +  e++r + +  a++ +e    ++++ +++R e+ + i +e++       k +++ +e+ + ++++l +elk+  
    KHJ30569.1  34 DESFEKVFSLLDQLAKDTEDLKLSEQNRTSKLDVALNEVEStlsNLKSSSRRREEESRRITDEVHglrnlipKAMEEQKETTESQLKELNAELKSLK 130
                   556799999*******************************7222566799*****999998887622111113444555566667777777777666 PP

  SF-assemblin  95 eelnekinn 103
                     l+++in 
    KHJ30569.1 131 LLLGQRINS 139
                   667888885 PP

>> DUF3584  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   7.8   9.5e-05     0.053     615     697 ..      48     130 ..      23     144 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 9.5e-05
     DUF3584 615 lqsaeakqkqaeeelkqlnaeleeakravaeaatalknardtlerlqnekesekdklekaiaerkqqaeeqlqkldaqlkqle 697
                  ++ e+ + + +++ ++l ++l+e +  +++ +++ + ++++ +r+++e   +++ + ka++e+k++ e ql++l+a+lk l+
  KHJ30569.1  48 AKDTEDLKLSEQNRTSKLDVALNEVESTLSNLKSSSRRREEESRRITDEVHGLRNLIPKAMEEQKETTESQLKELNAELKSLK 130
                 33444444555567788899999999999999999999999999999999999999999999999999999999999999886 PP

>> Med9  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   4.5   0.00032      0.18       5      75 ..      39     135 ..      35     139 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00032
        Med9   5 liydilksiekdp.......nlsskdletktgelrhkLkkarelirelpg...................idrsveeqeaeieeleeqlakKrelLkk 75 
                 +++ +l ++ kd+       ++ + +l+ +++e+   L++ ++  r  ++                   +++ +e+ e +++el+ +l+  + lL +
  KHJ30569.1  39 KVFSLLDQLAKDTedlklseQNRTSKLDVALNEVESTLSNLKSSSRRREEesrritdevhglrnlipkaMEEQKETTESQLKELNAELKSLKLLLGQ 135
                 5799999999999999***99**************************999****************************************9999975 PP

>> HTH_IclR  IclR helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00037      0.21       3      23 ..      38      58 ..      36      65 .. 0.94
   2 ?   -1.6   0.0       4.5   2.5e+03      15      36 ..     163     184 ..     162     188 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00037
                HHHHHHHCT-CTTBSS-BHHH CS
    HTH_IclR  3 dRalaiLdalaeapqeltlse 23
                ++ +++Ld+la+ +++l+lse
  KHJ30569.1 38 EKVFSLLDQLAKDTEDLKLSE 58
                799****************98 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 4.5
                 TBSS-BHHHHHHHHTS-HHHHH CS
    HTH_IclR  15 apqeltlselArrtglpkStvh 36 
                 ap e +l+e  +++  p S v 
  KHJ30569.1 163 APTETSLTEAEDKSSEPSSEVQ 184
                 6777899999999999999885 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   9.2   0.00027      0.15     157     264 ..      25     133 ..      21     147 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00027
        Spc7 157 lLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleeki.eelkeqkseleeeiaeae 254
                 ++e++++ +de  +++ +  ++l +  e+l+  +++ +s     L+e+ ++l++lk+  +++++e  + ++++  l++ i ++++eqk+++e++++e +
  KHJ30569.1  25 QIEQDKKAIDESFEKVFSLLDQLAKDTEDLKLSEQNRTSKLDVALNEVESTLSNLKSSSRRREEESRRITDEVHGLRNLIpKAMEEQKETTESQLKELN 123
                 456666666666666666666666666666665555455446666666666666666666666666666666666666653455666666666666666 PP

        Spc7 255 rvleeckgws 264
                   l+  k   
  KHJ30569.1 124 AELKSLKLLL 133
                 6555554443 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.1    0.0048       2.7      10      41 ..      19      50 ..       8      80 .. 0.84
   2 ?    2.7   0.1      0.25   1.4e+02      23      53 ..     107     137 ..     101     139 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0048
                HHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
       GST_C 10 llfyvkaeekkeelvdealekvaevlsaleee 41
                 ++  +++e+++++ de++ekv+  l++l + 
  KHJ30569.1 19 APPTAPQIEQDKKAIDESFEKVFSLLDQLAKD 50
                45556677*******************99875 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.25
                 HHHHHHHHHHHHHHHHHHHHHTSSSSSTTSS CS
       GST_C  23 lvdealekvaevlsaleeelkkqdylvGdkl 53 
                 + +e++e +  +l+ l++elk  + l G+++
  KHJ30569.1 107 AMEEQKETTESQLKELNAELKSLKLLLGQRI 137
                 4678899999999999999999999999876 PP

>> BshC  Bacillithiol biosynthesis BshC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   3.5   0.00033      0.18     384     497 ..      16     126 ..       8     132 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00033
                 EEE-HHHHHHHHHTT--HHHHHH-SHHHHHHHHHHTS-HHHHHHHHHHHHHHHHHHHHHHHHHHTT-GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        BshC 384 tlveekvakkleklglsvedlfekleelkkklveeaseleldelfeeakeeleeafealkelaakidktleklveanekkilkqlekLekkllkaekrk 482
                  ++ + +a ++e+ +  +++ fek+ +l ++l++++++l+l+   ++ +++l+ a+++++++++++ ++ +   e+++++i+++++ L++ + ka +++
  KHJ30569.1  16 PIIAPPTAPQIEQDKKAIDESFEKVFSLLDQLAKDTEDLKLS--EQNRTSKLDVALNEVESTLSNLKSSSR-RREEESRRITDEVHGLRNLIPKAMEEQ 111
                 56667777778888888999**********************..889999***************977655.568888999999999999999999999 PP

                 THHHHHHHHHHHHHH CS
        BshC 483 heeelrqlekikneL 497
                 +e+  +ql++++ eL
  KHJ30569.1 112 KETTESQLKELNAEL 126
                 999999999999988 PP

>> DUF4435  Protein of unknown function (DUF4435)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.9   0.00043      0.24     140     202 ..      58     124 ..      23     145 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00043
     DUF4435 140 rkklekdiklslslqevdlssieki....tleeikvenkieelkeefpdkieeekeeikkelrklnq 202
                 ++++ ++++  l+ +e++ls++ ++    + e++++   ++ l++ +p+++ee+ke+++++l++ln 
  KHJ30569.1  58 EQNRTSKLDVALNEVESTLSNLKSSsrrrEEESRRITDEVHGLRNLIPKAMEEQKETTESQLKELNA 124
                 3334444444455566566555333354566666777****************************83 PP

>> GTP-bdg_M  GTP-binding GTPase Middle Region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0       0.7   3.9e+02      46      73 ..      25      52 ..      20      56 .. 0.88
   2 ?    8.4   2.2    0.0056       3.1       5      69 ..      61     130 ..      59     132 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.7
                XXHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   GTP-bdg_M 46 kleldrrlireriaklkkeLekvkkkre 73
                ++e d++ i+e  +k+ + L++++k  e
  KHJ30569.1 25 QIEQDKKAIDESFEKVFSLLDQLAKDTE 52
                89****************9999999876 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0056
                 HHHHHHHHHHHHHHHHHHHC...XXXXXXXXX..X....XXXXXXXXXHHHHHHHHHHHHHHHHHHHHHH CS
   GTP-bdg_M   5 keaklQVelAqlkyllprLe...glgkelsrqgGg..igtrGpGetkleldrrlireriaklkkeLekvk 69 
                 + +kl V+l +++  l++L+   ++++e sr       g+r    + +e ++ + + + ++l+ eL+++k
  KHJ30569.1  61 RTSKLDVALNEVESTLSNLKsssRRREEESRRITDevHGLRNLIPKAMEEQKETTESQLKELNAELKSLK 130
                 789****************734433333333322122458999999********************9886 PP

>> Cluap1  Clusterin-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   6.0   0.00066      0.37     176     240 ..      57     122 ..      30     127 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00066
      Cluap1 176 kvkeelektkkalenlesdeanLeakiekkkqeleraqkrLqslqsvrPafmdey.ekleeeLqel 240
                 + +++++k+  al+++es+ +nL++  +++++e+ r ++  + l+++ P  m+e  e+ e++L+el
  KHJ30569.1  57 SEQNRTSKLDVALNEVESTLSNLKSSSRRREEESRRITDEVHGLRNLIPKAMEEQkETTESQLKEL 122
                 45678899999******************************************9824567888876 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1       2.3   1.3e+03       2      28 ..      29      55 ..      24      64 .. 0.56
   2 ?   11.5   5.7   0.00062      0.35       9      75 ..      61     128 ..      55     135 .. 0.82
   3 ?    3.0   1.0      0.28   1.6e+02       8      33 ..     110     135 ..     106     182 .. 0.59

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 2.3
                -HHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA  2 dkkelfdkleeleeqleelleeleelk 28
                dkk + +++e++ + l++l ++ e+lk
  KHJ30569.1 29 DKKAIDESFEKVFSLLDQLAKDTEDLK 55
                455555555555555555555555555 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00062
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.XXXXXXXXXXXXXXXXXXXXXXX CS
        YabA   9 kleeleeqleelleeleelkeelaelleenaeLeleneklrerl.eeeekkekekkkelsegkenLar 75 
                 + ++l+  l+e+ ++l++lk++  +  ee ++++ e + lr+++ +  e+++++++++l+e + +L+ 
  KHJ30569.1  61 RTSKLDVALNEVESTLSNLKSSSRRREEESRRITDEVHGLRNLIpKAMEEQKETTESQLKELNAELKS 128
                 66889999************************************644445555566666776666665 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.28
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA   8 dkleeleeqleelleeleelkeelae 33 
                 ++ e+ e+ql+el++el++lk  l +
  KHJ30569.1 110 EQKETTESQLKELNAELKSLKLLLGQ 135
                 33344455555555555555554444 PP

>> Prominin  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   4.3    0.0012      0.66     630     719 ..      27     115 ..       9     126 .. 0.80
   2 ?    2.2   0.4      0.06        34     569     640 ..     112     183 ..     106     197 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0012
    Prominin 630 aekleelanelsngkknlkqslkneaqdlraiqqelvlplessvkklkksvkkldeensdlqesikkllaaveraenflkkngseiinne 719
                 +++ +++ +++++   +l  +l ++ +dl+  +q+++ +l+ +++++++++ +l+++++  +e+ ++++++v+ + n ++k ++e  +++
  KHJ30569.1  27 EQDKKAIDESFEKV-FSLLDQLAKDTEDLKLSEQNRTSKLDVALNEVESTLSNLKSSSRRREEESRRITDEVHGLRNLIPKAMEEQKETT 115
                 44444445555443.78899************************************9999999999999999999999998887655544 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.06
    Prominin 569 teeiqkelenlkvdlsnlelLteeerkdLeklresglskihsslyleqlckkltkvnletlaekleelanel 640
                  e+ +++l++l+ +l++l+lL  +  ++  + ++s l +    + ++ + + +t+++l++ ++k  e ++e+
  KHJ30569.1 112 KETTESQLKELNAELKSLKLLLGQRINSTVSANSSPLGRSLAPTATSPTPQAPTETSLTEAEDKSSEPSSEV 183
                 455677788888888888888888888888888888888888888888888888888888887776665555 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   4.4    0.0014      0.81       6      84 ..      25     106 ..      22     148 .. 0.52

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0014
       TMPIT   6 elekefkeleetakeykqkleelsklqskcs....keikkqkkrlkelksslkklkksvk...eeeeeeveelkeelkerkkvlke 84 
                 ++e++ k++ e+++++ + l++l+k  ++++    ++++k    l+e++s+l++lk+s++   e    e +++++e++  ++ + +
  KHJ30569.1  25 QIEQDKKAIDESFEKVFSLLDQLAKDTEDLKlseqNRTSKLDVALNEVESTLSNLKSSSRrreE----ESRRITDEVHGLRNLIPK 106
                 5778888888888888888888888777765111133444555677888888888887443332....333333333333332221 PP

>> SKA1  Spindle and kinetochore-associated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.9     0.021        12      16      97 ..      14      92 ..       2     109 .. 0.69
   2 ?    8.5   8.1    0.0028       1.6      20     138 ..      65     194 ..      46     196 .. 0.51

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.021
                ........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        SKA1 16 qdpallkedlskieaevsaleellnklkkelqeeeeaikklkkeieaslkqqeklqhlkenlpshlpkktaassaeesksss 97
                 +p ++ ++ ++ie++ +a+ e+ +k+   l++ ++  ++lk + e+ +    kl   ++++ s l + +++s+  e++s  
  KHJ30569.1 14 VYPIIAPPTAPQIEQDKKAIDESFEKVFSLLDQLAKDTEDLK-LSEQNR--TSKLDVALNEVESTLSNLKSSSRRREEESRR 92
                566666677788888888888888888888888888888888.444444..4557777777777777777776666665554 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0028
                 ....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX........ CS
        SKA1  20 llkedlskieaevsaleellnklkkelqeeeeaikklkkeieaslkqqek.lqhlkenlpshlpkktaassaeeskssspeeeeeteskke........ 109
                 l    l+++e+++s l+++ ++ ++e ++ ++  + l+++i + +++q++ ++  +++l++ l++ +    +  ++++s +++   +s ++        
  KHJ30569.1  65 L-DVALNEVESTLSNLKSSSRRREEESRRITDEVHGLRNLIPKAMEEQKEtTESQLKELNAELKSLKLLLGQRINSTVSANSSPLGRSLAPtatsptpq 162
                 3.4556666666666666666666666666666666666666555555555555555555555544433322222222222222111111122234456 PP

                 ...XXXXXXXXXXXXX-S--SS----HHHHTT CS
        SKA1 110 ...keeeaekakkpkkreikevayiteeefes 138
                    +++ +e+++k ++ +++   ++t++ f+s
  KHJ30569.1 163 aptETSLTEAEDKSSEPSSEVQVFLTNTRFNS 194
                 55455566666666665666666888888876 PP

>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   3.2    0.0013      0.73     197     282 ..      46     128 ..      28     190 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0013
       LMBR1 197 dldeelkklyfeaaklntekeeaereledllkevkklrksisesdp.lrkyleeilkkvPeeiaeklksnenkteeslaklekqlik 282
                 +l ++++ l++++++ +++++ a +e+e++l+++k ++++ +e+++ + + +  + + +P+ ++e+    ++ te++l++l+ +l++
  KHJ30569.1  46 QLAKDTEDLKLSEQNRTSKLDVALNEVESTLSNLKSSSRRREEESRrITDEVHGLRNLIPKAMEEQ----KETTESQLKELNAELKS 128
                 566677888888999999999999999999999999999998888856699999999****88888....44555555555544443 PP

>> YlqD  YlqD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       3.4   1.9e+03      66      86 ..      27      47 ..      22      66 .. 0.47
   2 ?   10.8   5.0   0.00087      0.49      21      95 ..      61     137 ..      48     144 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 3.4
        YlqD 66 ekekserlekkkqllqqleqv 86
                e+ k+ + e  +++ + l+q+
  KHJ30569.1 27 EQDKKAIDESFEKVFSLLDQL 47
                444444444443333333333 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00087
        YlqD  21 lqqqlqaqieqldkelqqLefqakrlikeikkqsaq...qieeiqeqvekekserlekkkqllqqleqvqkLelgsev 95 
                   ++l+ +++++++ l++L+   +r ++e ++ + +     + i + +e++k+  + + k+l+++l+ ++ L lg+ +
  KHJ30569.1  61 RTSKLDVALNEVESTLSNLKSSSRRREEESRRITDEvhgLRNLIPKAMEEQKETTESQLKELNAELKSLKLL-LGQRI 137
                 45678899***********************99988886666788889999999999999999999999766.66665 PP

>> DUF1043  Protein of unknown function (DUF1043)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5  11.0     0.014       7.7      39     103 ..      25      89 ..      22     185 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.014
     DUF1043  39 eleeqkqeledHfaqsaelLetlaedyqkLyqhlaksseeLlpeleeqelfqqkkleekkaeaee 103
                 ++e+ k+ +++ f++  +lL++la+d+++L+   ++ +++L  +l+e e  +++  +++++++ee
  KHJ30569.1  25 QIEQDKKAIDESFEKVFSLLDQLAKDTEDLKLSEQNRTSKLDVALNEVESTLSNLKSSSRRREEE 89 
                 89*****************************999999999*666666666554444444433333 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   9.6   0.00071       0.4      13      90 ..      61     136 ..      54     140 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00071
  TMF_TATA_bd  13 lverlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlLellGek 90 
                    ++l  ++ + E+ l++lk++  r e+e +++++e+  l +     k+++++ e++e++l+el+ ++++l  llG++
   KHJ30569.1  61 RTSKLDVALNEVESTLSNLKSSSRRREEESRRITDEVHGLRNLIP--KAMEEQKETTESQLKELNAELKSLKLLLGQR 136
                  568899999*****************************9986665..56677778999******************97 PP

>> DUF4208  Domain of unknown function (DUF4208)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   1.4    0.0076       4.2       6      63 ..      28      85 ..      24      96 .. 0.80
   2 ?    4.4   2.2     0.088        49       5      70 ..      59     120 ..      55     122 .. 0.80
   3 ?    3.8   1.2      0.14        79      23      61 ..     109     144 ..      80     152 .. 0.61

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0076
     DUF4208  6 mdeeeckellrpvkksLkrLkkltkekl.lskkerakilkkeLlkiGdfIdellkekke 63
                +d++ + e ++ v + L +L k+t++ l ls+++r ++l   L ++ + +++l  +++ 
  KHJ30569.1 28 QDKKAIDESFEKVFSLLDQLAKDTED-LkLSEQNRTSKLDVALNEVESTLSNLKSSSRR 85
                56677999***************888.66***********9999987777777766655 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.088
     DUF4208   5 smdeeeckellrpvkksLkrLkkltkekllskkerakilkkeLlkiGdfIdellkekkeekkeklk 70 
                 ++ ++++   l+ v+++L +Lk+ ++    +++e+ +++ +e+  + + I + ++e+ke+ +++lk
  KHJ30569.1  59 QNRTSKLDVALNEVESTLSNLKSSSR----RREEESRRITDEVHGLRNLIPKAMEEQKETTESQLK 120
                 44455688899***********7754....599999999999999999999999999887666665 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.14
     DUF4208  23 krLkkltkekl.lskkerakilkkeLlkiGdfIdellkek 61 
                 ++    +ke +  + ke  ++lk+  l +G++I++++  +
  KHJ30569.1 109 EE----QKETTeSQLKELNAELKSLKLLLGQRINSTVSAN 144
                 22....2222223445555555555566788888888765 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   5.7    0.0043       2.4     333     420 ..      56     144 ..      22     148 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0043
        FapA 333 pelkeklkeleeeleeleeeleklkkkikklpklka..ekqlesekkeqlkklletkeklkeeleeleeelkelkeeleskkeeakikvn 420
                 ++ ++++++l+  l+e+e+ l +lk++ ++ ++++   ++++   +    k ++e+ke  +++l+el++elk+lk  l ++  ++ +++n
  KHJ30569.1  56 LSEQNRTSKLDVALNEVESTLSNLKSSSRRREEESRriTDEVHGLRNLIPKAMEEQKETTESQLKELNAELKSLKLLLGQR-INSTVSAN 144
                 456677799999999999999999999555555333224444445555556677777999999999999999999988888.45567666 PP

>> HeLo  Prion-inhibition and propagation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   1.1       0.6   3.4e+02     154     202 ..      29      79 ..      26      81 .. 0.77
   2 ?   10.7   0.6   0.00063      0.36     164     205 .]      92     132 ..      87     132 .. 0.95

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.6
                 SHHHHHHHHHHHHHHHHHHHHTTT-H..HHHHHHHHHH..CTT--.SHHHH CS
        HeLo 154 dkkkfeelvkdlkelvdsLeeLlpasqqqrvqrlvree..ieqlskdveeL 202
                 dkk+++e  +++  l d+L + +++ ++++++r+ + +  ++++++ +++L
  KHJ30569.1  29 DKKAIDESFEKVFSLLDQLAKDTEDLKLSEQNRTSKLDvaLNEVESTLSNL 79 
                 888888888999999999999888888888888888885556666666666 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00063
                 HHHHHHHHHHHTTT-H..HHHHHHHHHHCTT--.SHHHHHHH CS
        HeLo 164 dlkelvdsLeeLlpasqqqrvqrlvreeieqlskdveeLkll 205
                 ++++ v +L +L+p++ ++++++++++++++l+ ++++Lkll
  KHJ30569.1  92 RITDEVHGLRNLIPKA-MEEQKETTESQLKELNAELKSLKLL 132
                 78999***********.9*********************987 PP

>> zf-C4H2  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7  11.1    0.0072       4.1      21     130 ..      57     138 ..      24     215 .. 0.45

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0072
     zf-C4H2  21 kevealekeekcleeykkelelLeqEkmaHveeLrlIhaDinalEsvikeaeeekeksl.ekakklyeeykklkeevnelrselglekledleeeeeel 118
                 +e + ++k +  l+e++++l++L++  +   ee r I + ++ l + i +a ee+++++ ++ k+l +e+k lk                         
  KHJ30569.1  57 SEQNRTSKLDVALNEVESTLSNLKSSSRRREEESRRITDEVHGLRNLIPKAMEEQKETTeSQLKELNAELKSLKL------------------------ 131
                 333334444444555555555555555555555555555555555555444443333320233444444444432........................ PP

     zf-C4H2 119 lkeeifekqklk 130
                      +  q  +
  KHJ30569.1 132 -----LLGQRIN 138
                 .....2222211 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   1.7     0.018       9.9      36     110 ..      30     104 ..      28     109 .. 0.89
   2 ?    5.0   0.3     0.042        24      37      70 ..     106     139 ..     103     146 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.018
     DUF1664  36 krslsdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeav 110
                 k+ + +  e+v + l+q+ ++ ++ k   ++r  ++d  l+e++ + +++k+   + +e+ ++i ++v+ +++++
  KHJ30569.1  30 KKAIDESFEKVFSLLDQLAKDTEDLKLSEQNRTSKLDVALNEVESTLSNLKSSSRRREEESRRITDEVHGLRNLI 104
                 6778888899999999999999999999999************99999999999999999999999999888776 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.042
     DUF1664  37 rslsdavesvskqleqvseslaatkrhLssridr 70 
                 + +++  e+  +ql+++ ++l++ k  L +ri++
  KHJ30569.1 106 KAMEEQKETTESQLKELNAELKSLKLLLGQRINS 139
                 578888899999*******************986 PP

>> ERM  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  14.8    0.0096       5.4      43     153 ..      55     175 ..      22     198 .. 0.55

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0096
         ERM  43 rraeeea.elLeqkaaeaeeeiqrlkesaekeeeekeklerklreaelea.arleeeserkeeeaerLkeeleeareaeeeakekllealstpsks... 136
                 + +e+++  +L+   +e+e   ++lk s+++ eee +++ ++++    ++ + +ee++e  e++ ++L +el+  +  + +  +    a s+p  +   
  KHJ30569.1  55 KLSEQNRtSKLDVALNEVESTLSNLKSSSRRREEESRRITDEVHGLRNLIpKAMEEQKETTESQLKELNAELKSLKLLLGQRINSTVSANSSPLGRsla 153
                 222222224566666677888888888888888888888888887777762446666667777888888888888877766666666555555443666 PP

         ERM 137 ......eseenveeseteeeeen 153
                       ++++ +e+s te e+ +
  KHJ30569.1 154 ptatspTPQAPTETSLTEAED-K 175
                 666543222222222222222.2 PP

>> M  M protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0       3.3   1.8e+03       5      15 ..      71      81 ..      71      83 .. 0.87
   2 ?    7.0   7.7      0.02        11       1      21 []     110     130 ..     110     130 .. 0.94

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 3.3
           M  5 eLEaelqeLee 15
                e+E++l++L++
  KHJ30569.1 71 EVESTLSNLKS 81
                79******996 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.02
           M   1 eakkeLEaelqeLeeelqaLe 21 
                 e+k++ E++l+eL++el+ L+
  KHJ30569.1 110 EQKETTESQLKELNAELKSLK 130
                 79****************996 PP

>> HNOBA  Heme NO binding associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   3.0    0.0012      0.65     163     215 ..      51     106 ..      41     111 .. 0.83
   2 ?   -0.5   0.5       1.2   6.6e+02     179     200 ..     107     128 ..     101     135 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0012
       HNOBA 163 srelvlagiqqsaelelaldqleeksaeLeesmkeleeekkr.tdeL..LysmiPk 215
                 + +l l+ ++++++l++al+++e + ++L+ s ++ eee +r tde   L ++iPk
  KHJ30569.1  51 TEDLKLSEQNRTSKLDVALNEVESTLSNLKSSSRRREEESRRiTDEVhgLRNLIPK 106
                 678999**************************999988877725655556677776 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.2
       HNOBA 179 laldqleeksaeLeesmkelee 200
                  +++q e++ ++L+e ++el++
  KHJ30569.1 107 AMEEQKETTESQLKELNAELKS 128
                 5677888888888888887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1685  (0.0939818); expected 358.6 (0.02)
Passed bias filter:                      654  (0.0364772); expected 358.6 (0.02)
Passed Vit filter:                       120  (0.00669307); expected 17.9 (0.001)
Passed Fwd filter:                        34  (0.00189637); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              32  [number of targets reported over threshold]
# CPU time: 0.62u 0.36s 00:00:00.98 Elapsed: 00:00:00.48
# Mc/sec: 1357.13
//
Query:       KHJ30570.1  [L=1631]
Description: putative sec7 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-28   99.2   0.3    4.6e-28   98.2   0.3    1.4  1  Sec7      Sec7 domain
    3.4e-20   72.6   0.0    1.1e-19   70.9   0.0    2.0  1  PH_9      Pleckstrin homology domain


Domain annotation for each model (and alignments):
>> Sec7  Sec7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.2   0.3   5.1e-32   4.6e-28      16     157 ..     854    1000 ..     839    1007 .. 0.89

  Alignments for each domain:
  == domain 1  score: 98.2 bits;  conditional E-value: 5.1e-32
                  HHHHHHHHHHCCCCTSS..HHHHHHHHHHT..CCS-HHHHHHHHCSGGHHHHHHHHHHHCTS--TT--HHHHHHHHCCCS-B-SSHHHHHHHHHHHH CS
        Sec7   16 pkkgikyliekglleed..pksiakflket..pgldkkklGeylgkekefnkevlkefvdlfdfsglrldeAlRlflssfrlpgEaqkierilekFa 108 
                  +++ i+ ++e+++ +++    +ia+ +++   +++ k k  ++lgke+   k++l+ + dl +f+ l++  AlR+++ ++ l+ E+qki+ril +F+
  KHJ30570.1  854 SDSNINIVYENKISDKNvkDYEIAREIFDGneNSVPKDKAADWLGKEDISFKKILEFYFDLYNFKHLNVLAALRKLCGRLVLKAESQKIDRILLAFS 950 
                  466788888999997763355699988776669999************99999******************************************** PP

                  HHHHHTTCTC.G-SHHHHHHHHHHHHHHHHHHC-TTSCCS--HHHHHHCT CS
        Sec7  109 ekyfeqnpev.fenadavfvLaysiimLntdlhnpqvkkkmtledFiknn 157 
                  ++++e np+  f++ d+v+++ays+++Lntdlh  ++++km+  +Fikn+
  KHJ30570.1  951 SRWCECNPHHgFKEIDVVYTIAYSLLLLNTDLHVANIEQKMSRTQFIKNT 1000
                  *****9995537999*********************************96 PP

>> PH_9  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.9   0.0   1.3e-23   1.1e-19       1     119 []    1296    1424 ..    1296    1424 .. 0.98

  Alignments for each domain:
  == domain 1  score: 70.9 bits;  conditional E-value: 1.3e-23
        PH_9    1 ykegivqrkllleskgkktplkkrgWkevyavlkklvLylykdeeesesaetedlks.........lknakllgkirlhhaLaek..asdYkk.ksh 85  
                  +keg v  k++les  k++   +r+W ev+av+ k+ L l+++ ++s++++t+d++s          +na+ lg+  l+ ++a+   +++Y+k ++h
  KHJ30570.1 1296 AKEGLVRHKHHLESLDKRA--RERNWTEVFAVIEKGYLSLFTFPNKSRRQKTKDKNSpgvvgggnwQENAQNLGSFLLQQTIASAlpSPGYSKaRPH 1390
                  599****************..*********************************999***************************9999********* PP

        PH_9   86 vFrLqtadgaeylfqtsdakevqeWvdtiNyvAA 119 
                  v +L + +ga+ lfq+++++ vqe v+t Ny+ A
  KHJ30570.1 1391 VWALSLPTGAVHLFQVGTPDVVQEFVSTANYWGA 1424
                  ********************************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1631 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       711  (0.0396564); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.90u 0.28s 00:00:01.18 Elapsed: 00:00:00.46
# Mc/sec: 10656.06
//
Query:       KHJ30571.1  [L=530]
Description: hypothetical protein EV44_g0985 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.5e-09   37.0   0.3    3.1e-07   30.1   0.2    2.5  2  RNA_pol_I_TF  RNA polymerase I specific initiation factor


Domain annotation for each model (and alignments):
>> RNA_pol_I_TF  RNA polymerase I specific initiation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.2   1.8e-11   3.1e-07      31     119 ..     161     297 ..     131     307 .. 0.72
   2 !    4.2   0.0    0.0014        26     154     189 ..     389     424 ..     366     428 .. 0.83

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 1.8e-11
  RNA_pol_I_TF  31 seirsyktkhienltqllhlnilrrnwklAykiFslLiRlp....evdirs..iWplGveiLekleeetsse......................... 96 
                    + ++ + +hi+ lt++lh ++l ++   A++++ lLiR++     +d+r+   W++G e+L++   +++s                          
    KHJ30571.1 161 IKGHQLRLQHINVLTTILHKCLLAHDVLRASRAWGLLIRMQvsgqGMDLRAsgYWSIGAELLIRSLCSKHSGatfnsetetddggissrirnkshhp 257
                   34455699*******************************964443689996448********99877666656677777777777777777777777 PP

  RNA_pol_I_TF  97 .................kflewlssvysskkafnqstsrr 119
                                    +++e+l+  y+ kk+f ++ +  
    KHJ30571.1 258 essrsgwdliknlqkttDYYERLIIEYPFKKQFLSKINAL 297
                   7777777777777777777777777777777777766665 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0014
  RNA_pol_I_TF 154 vldkleelidklselvLePPysedgelyfllalckl 189
                   +l+  e++  +l+e + +PPyse   l +l +++ l
    KHJ30571.1 389 ALNASEKIALRLDERMTTPPYSESLDLLHLRGMLAL 424
                   5566788999*************9999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1142  (0.0636957); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 3867.98
//
Query:       KHJ30572.1  [L=161]
Description: hypothetical protein EV44_g3300 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       457  (0.0254894); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.36
# Mc/sec: 1356.91
//
Query:       KHJ30573.1  [L=245]
Description: putative ppe family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1611  (0.0898544); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1751.14
//
Query:       KHJ30574.1  [L=445]
Description: putative phosphoserine aminotransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.5e-28   99.1   0.0    7.4e-18   64.6   0.0    2.4  2  Aminotran_5  Aminotransferase class-V


Domain annotation for each model (and alignments):
>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.0   3.2e-12   5.7e-08       3      95 ..       9     106 ..       7     110 .. 0.84
   2 !   64.6   0.0   4.1e-22   7.4e-18      76     342 ..     118     409 ..     114     428 .. 0.77

  Alignments for each domain:
  == domain 1  score: 32.1 bits;  conditional E-value: 3.2e-12
                  EBTTTS----HHHHHHHHHHHHCT..CCSSSSSSSHHHHHHHHHHHHHHHHHHHHHT-S.TGGGEEEESSHHH.HHHHHHHHCCCC.-TTTSEEEEET CS
  Aminotran_5   3 ldsaAttqkpqeVldalqeyytdy..nanvhrsvhhlgkeatkaveearekvaelinae.seeeiiftsGtte.ainlvalslars.lkpgdeivvte 95 
                   + a+++ +p eVl+++++ + +y   + + ++ +h+++ a++ +e++++++a+ ++++ +++ei+f++G+++ ++++ +++l +  ++++++ +++e
   KHJ30574.1   9 YFGAGPALLPTEVLQKAAQALVNYehTGLGLSEHSHRSTIASNVLEQTKSDLARYLEIPrDRYEILFMQGGGTgQFSATVYNLVAIwVERRKQKILKE 106
                  689*************9999876622688899*************************983569********999*******99877766666655555 PP

  == domain 2  score: 64.6 bits;  conditional E-value: 4.1e-22
                  HHHHHCCCC-TTTSEEEEETTSHGGGTHHHHHHHHHHTEEEEEEEBETTSCBE......GGGHHHH--TTEEEEEEESBETTTTEB--HHHHH....H CS
  Aminotran_5  76 lvalslarslkpgdeivvteaehhanlvpwqelakrtgakvkvipldeegeld......ldelekllnektklvaithvsnvtGtiqpveeig....k 163
                  l+++ l+++++++ +i++ +++ ++   + qe+ +  g k + i  d++   +      +de++++l++++++v+++ +++v G+ +p   ++     
   KHJ30574.1 118 LILNELRKAVSEDLKIDYLVTGSWSLK-ASQEATRLLGSKHVNIATDSREVNQgkfgriPDEATWKLSKDPAMVYYCDNETVDGVEFPGLPLCfgsgG 214
                  788889888999*************99.99999999999887777776555545666899*************************8886554312212 PP

                  HHHHT....T-EEEEE-TTTTTTS---HHHHTESEEEEETTTTTSSTT-EEEEEEHHHHHTS........SS.STTSEEEEET.TEEEEHCTTGGGS. CS
  Aminotran_5 164 lakkk....galvlvDaaqavghipidvkklgvDflafsghKllgPtGiGvlyvrkellekl......eplllggemveevsl.eettfaeapskfea 250
                    k++    + ++++D++++++++++ ++++ +  ++f+++K+lg tGi+v++++k+ll  +      e l   g    ++ +  +  +a++ s ++ 
   KHJ30574.1 215 DKKDNelcvDPILVADMSSNILSRRFPIERFSL--IFFGAQKNLGTTGITVVIIKKNLLPPFvktpdaELLRKLGL-PICPIIfSYEAMAKNNSLYN- 308
                  2233311225678********************..************************98866543222233333.44555559999*********. PP

                  SS--HHHHHHHHHHHHHH.HCH..HHHHHHHHHHHHHHHHHHHHCTSTTEEEES.-B-CTCBSEEEEEETTCSH...HHHHHHHHHT..TEEEEE..E CS
  Aminotran_5 251 GTpnvagiiglgaaleyl.eei..gleaiekhekelaeyllerlkslpgvrlygpdkaerrasivsfnfkgvha...edvatlLdee..gIavrs..G 338
                   T  +++i++ g++le l ++   g++  e  ++e+a+ ++ +l+++p+++ +++dk+ r++  ++f +k  +       +++L+ +  +  +++  G
   KHJ30574.1 309 -TLSIFDIYVAGQVLERLlQKYpnGVDGQEVVSNEKAKLIYTTLDAYPEIYHIVADKNARSRMNICFRIKLGSNsidISEKKFLQGAqeKLGLQGleG 405
                  .**************9987885558999999*********************9998888888888888865544222233455543223555555556 PP

                  -TTT CS
  Aminotran_5 339 hhca 342
                  h+++
   KHJ30574.1 406 HRSV 409
                  6655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3129.88
//
Query:       KHJ30575.1  [L=832]
Description: putative duf544 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.3e-26   90.1   0.0    3.9e-25   88.2   0.0    2.1  2  MINDY_DUB  MINDY deubiquitinase


Domain annotation for each model (and alignments):
>> MINDY_DUB  MINDY deubiquitinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.31   5.5e+03      18      60 ..     185     225 ..     146     233 .. 0.63
   2 !   88.2   0.0   2.2e-29   3.9e-25       1     116 [.     330     476 ..     330     477 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.31
   MINDY_DUB  18 eevsleeLlelladilldnnplnqeenlsellelLpklqtgld 60 
                  +vs   L + +a    d+++  +++n+ + +++L + ++ l 
  KHJ30575.1 185 ATVSKPVLCSEVATFDWDSKK--RDHNVLDSTQVLAENSKRLS 225
                 345555555555555555544..67777777777777666665 PP

  == domain 2  score: 88.2 bits;  conditional E-value: 2.2e-29
   MINDY_DUB   1 vNvLlLsgk.......iellpedreevsleeLlelladilldnnplnqeen...lsellelLpklqtgldvnprF.....................dgi 68 
                 vN+L Ls++       +e+l ++re+vsl+ Ll++++d++++ ++ n +++   +++l+++L +lqtg++vnp+F                     +++
  KHJ30575.1 330 VNALTLSTPaglntplVETL-RSREQVSLGLLLDAVFDEITSGRHGNITNElpdVTDLYSFLVSLQTGMNVNPKFfpaessyieesklkerlwnerKKA 427
                 7**************99998.***********************96666666669***************************************99666 PP

   MINDY_DUB  69 dsFektselalFdllnipLvHGwlvdp.qdaeaaealsaksYneavell 116
                   Fe+t+e++l+++++++L+HGwl+ p + ++aa  +sak+Y++a++++
  KHJ30575.1 428 GLFEETREMRLYSTFRVSLIHGWLPQPnSPEYAALYRSAKTYEDAQNVI 476
                 7**************************5556666666*********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (832 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1308  (0.0729544); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.26s 00:00:01.00 Elapsed: 00:00:00.47
# Mc/sec: 5312.26
//
Query:       KHJ30576.1  [L=147]
Description: hypothetical protein EV44_g0225 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.034   13.7   0.0      0.047   13.2   0.0    1.1  1  PipA      PipA protein


Domain annotation for each model (and alignments):
>> PipA  PipA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.6e-06     0.047      51      99 ..      43      92 ..      30      94 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.6e-06
        PipA 51 dieidddtydecrevlsrvledaytq.setfrrlmnyayekelhdveqrw 99
                +i i     d c ++ s++++  y    +tf  l ny y++e++  +  w
  KHJ30576.1 43 EIVITKTVVDACEKERSSIVNVGYGGiFGTFITLQNYLYNREVYSKNGEW 92
                467788889***************85279*************99877666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1131.87
//
Query:       KHJ30577.1  [L=337]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.25   11.2   4.2       0.44   10.4   4.2    1.4  1  DASH_Spc19  Spc19


Domain annotation for each model (and alignments):
>> DASH_Spc19  Spc19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   4.2   2.4e-05      0.44      37     131 ..      95     190 ..      75     213 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 2.4e-05
                 HHH-------TTTHHHHHHHHHHHTTTHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHT-XXXXXXXXXXXX....XXXX CS
  DASH_Spc19  37 kttrvFeLipesdleaakaslaeeiePqiee.llekaekeleklerreetLkaklelqegrlsnaesskkeeeeseeskeeeeeeenkeeekskkk 131
                 + t  +e i+ ++++aa ++ a  i+ q++  l+  ++k  +  +  ++tL+ k   q++  + +++++  + + +e++++++ ++++++ ksk+ 
  KHJ30577.1  95 QFTTLYESISDPEIRAAMNEAAVGIKEQLRAiLTGDIKKATNPSQPNRKTLIPKTVEQKKPTKTKDQTAMPTGQYKEQSQTNQGASANKNIKSKAA 190
                 67889************************9736679****************************98888888888888776666555555544332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1586  (0.08846); expected 358.6 (0.02)
Passed bias filter:                      673  (0.037537); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2437.13
//
Query:       KHJ30578.1  [L=774]
Description: putative transcription factor cys6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.6e-09   35.4   0.7    1.1e-08   34.5   0.7    1.5  1  Fungal_trans  Fungal specific transcription factor domain
    4.6e-05   23.5  14.6    0.00012   22.1  14.6    1.7  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   0.7   1.2e-12   1.1e-08       3     187 ..     279     449 ..     277     482 .. 0.83

  Alignments for each domain:
  == domain 1  score: 34.5 bits;  conditional E-value: 1.2e-12
  Fungal_trans   3 rffsnfhpqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeili..hedfsspssslwilq.s 96 
                   ++f+n+h+  p+l+k  f+ +      ++  + spl l +i+al++++s+++++++                ++ +l+  h + +  +++l +lq s
    KHJ30578.1 279 IYFENIHQYVPVLNKYLFYQQW----LTDRESISPLILEVIFALACQLSGKTSRSN----------------QWLALFskHSNSFLDRPRLSTLQaS 355
                   7**************9999999....9999***********************998................89999999999999*********99 PP

  Fungal_trans  97 Llllelyektss..dralherhhgvavrlarslgLhrnpsyvgkks..lwklweeeaesrrRlwwaaFylDktialklGrpp.llddsqinlpLPc 187
                   L +l   e t    + +  ++++   + +ar+lgL ++ ++ +  +  + ++         R+w ++F+ + +i +  Gr++   d ++++  +P+
    KHJ30578.1 356 LICLKGREATPKrgYYYRSWMTIVHCIEMARDLGLDEHFANHKAGKscGSEHNLCVL--KSRIWQTVFVCEMMIGTPQGRTVlSVDIESVDFDIPN 449
                   999999999988445899999999999************999966544333333333..5599999999999999988888865555555555444 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1  14.6   1.3e-08   0.00012       1      31 [.      50      83 ..      50      88 .. 0.90

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 1.3e-08
                SS-HHHHHCT---ST....SSSS-HHHHHCTHHHC CS
     Zn_clus  1 haCdnCrkkKvKCda....kkPaCsnCkklnleCt 31
                +aC++Cr++K+KCda      P Cs Ck+l   C 
  KHJ30578.1 50 RACERCRRRKIKCDAattnTWP-CSACKRLKICCI 83
                69*************9887778.*******99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (774 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.42
# Mc/sec: 5485.19
//
Query:       KHJ30579.1  [L=204]
Description: putative fam96b-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      6e-09   36.0   0.0    1.7e-08   34.5   0.0    1.8  1  FeS_assembly_P  Iron-sulfur cluster assembly protein
  ------ inclusion threshold ------
        0.1   12.6   0.0        0.2   11.7   0.0    1.4  1  SBDS_C          SBDS protein C-terminal domain


Domain annotation for each model (and alignments):
>> FeS_assembly_P  Iron-sulfur cluster assembly protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   0.0   1.9e-12   1.7e-08       1      72 [.      71     155 ..      71     157 .. 0.89

  Alignments for each domain:
  == domain 1  score: 34.5 bits;  conditional E-value: 1.9e-12
                     HHHHHHHHTT-B-TTTSSBCCCCT---E.....EEE-T.......-EEEEEE--SSTT-TTHHHHHHHHHHHHC..STT--EEEE CS
  FeS_assembly_P   1 keavlaaLrtVtDPelgvdlvslglvre.....idieg.......gkVsvditltypacslaeairadaeaalr.alpgvevveV 72 
                     ++++++ ++ + DPe++++l slg+v+       ++++       + V v +t+t  +csla+ i   ++  l+ alp+   veV
      KHJ30579.1  71 EQEIYDLIAPISDPEHPLSLESLGVVKLqdvhlTQVSDqlspiviSHVLVELTPTVTHCSLATVIGLGVRVRLEqALPPSYRVEV 155
                     699**********************987776665555599999999*********************************666666 PP

>> SBDS_C  SBDS protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.3e-05       0.2      26      60 ..     142     177 ..     136     184 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.3e-05
                 HHHHHHH.HTT----TTS-CCCCHHHHHHHHTTTS- CS
      SBDS_C  26 mIekalk.elgtsvktnksaksQalevikaLiqeip 60 
                 + e+al  + +++vk++k + sQa ev k+L  +  
  KHJ30579.1 142 RLEQALPpSYRVEVKIKKDTHSQAEEVSKQLADKER 177
                 56888887889********************86555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      577  (0.0321825); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1576.06
//
Query:       KHJ30580.1  [L=206]
Description: putative small secreted protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1834  (0.102292); expected 358.6 (0.02)
Passed bias filter:                      635  (0.0354175); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.35
# Mc/sec: 1752.69
//
Query:       KHJ30581.1  [L=897]
Description: putative atp-dependent rna helicase chl1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-61  207.8   0.1    5.2e-61  205.8   0.1    2.2  1  Helicase_C_2    Helicase C-terminal domain
    1.3e-49  168.2   0.2    1.3e-49  168.2   0.2    2.1  2  DEAD_2          DEAD_2
     0.0044   16.8   0.1        2.6    7.8   0.1    2.5  2  DEAD            DEAD/DEAH box helicase
     0.0058   16.9   0.9      0.015   15.6   0.9    1.7  1  Ribosomal_L34e  Ribosomal protein L34e
  ------ inclusion threshold ------
      0.017   15.4   0.0        2.6    8.3   0.0    2.8  2  AAA_22          AAA domain
      0.065   12.7   0.0        2.2    7.7   0.0    2.3  2  PhoH            PhoH-like protein


Domain annotation for each model (and alignments):
>> Helicase_C_2  Helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.8   0.1   1.7e-64   5.2e-61       1     170 [.     658     869 ..     658     870 .. 0.94

  Alignments for each domain:
  == domain 1  score: 205.8 bits;  conditional E-value: 1.7e-64
  Helicase_C_2   1 llellevvpggvlvffpSyklleevverlkeel.........eskkieifveekeesrekvleeykek..kkkgaillavcrGklsEGidfsddllr 86 
                   +l++++vvp+gv++ffpSy++l++v+ r+++            ++k+++f+e k+ s ++vl++y ++  ++kg +ll+v++Gk+sEGi+fsd+l+r
    KHJ30581.1 658 ILNICQVVPDGVIIFFPSYQYLNSVFTRWATDQksgnsllkrLETKKQVFQEGKDVSVDTVLQNYAQAidSGKGGLLLSVVGGKMSEGINFSDALGR 754
                   799**************************995444455555577888*****9999***********556*************************** PP

  Helicase_C_2  87 aviivglPfpnpkdpeveakreyldekgk...............................knsgkewylpealravnQaiGRliRhkdDygaivllD 152
                   +v+i+glPfpn+++ e++ak ey+++++k                               k+ ++e+y+++++ravnQ+iGR+iRhkdDy+aiv++D
    KHJ30581.1 755 CVVIIGLPFPNINSAEWKAKIEYIENSHKkqlhaqsskskntiekgipntekvesktktaKDVSREYYENACMRAVNQSIGRAIRHKDDYAAIVMID 851
                   **************************99999**************************998888********************************** PP

  Helicase_C_2 153 eRfakeeireklpkwlre 170
                   +Rf++++ir+klp w++e
    KHJ30581.1 852 KRFRNNKIRNKLPGWIKE 869
                   ***************987 PP

>> DEAD_2  DEAD_2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.2         2   5.8e+03      71     105 ..     146     185 ..      96     187 .. 0.56
   2 !  168.2   0.2   4.3e-53   1.3e-49       1     176 []     223     414 ..     223     414 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 2
                 TTTTTT-SCC.....CCHHHHHHHHHHC---CHHHHHHHH CS
      DEAD_2  71 eekCsffenl.....eelkklkkllleevvdiedlvelge 105
                 +   +f +n+      ++++++++l++ + d ++l+++g+
  KHJ30581.1 146 SPDSKFENNEnlyvlDDYESDQDQLNSYASDTNKLMNFGS 185
                 3333444333334444444446777777777777777765 PP

  == domain 2  score: 168.2 bits;  conditional E-value: 4.3e-53
                 EEESSHHHHHHHHHHHHHHHHHCH....H...........HS---EEEE--CCCC-SCHHCCCHHCCCCHHHHHHHHHCCHHCCHTTTTTT-SCCCCHH CS
      DEAD_2   1 ycsRThsqleqvvkelkklesykk....k...........kekvkvviLgSRknlCineevkkekkekavneaCkelkkkkaeekeekCsffenleelk 84 
                 y sRThsql+q+++el++ +  ++    +            e+vk+v+LgSRknlCin++v++  + +++ne+C el+++ +  k++kC f  n+e++ 
  KHJ30581.1 223 YSSRTHSQLTQFINELRRPKFPSSiseiSnqecssqdgsdIESVKHVTLGSRKNLCINPKVHQLGSLTSINERCVELQQSST-PKDKKCIFLPNQENQP 320
                 89***************97433334444045667777777689*************************************96.5699****99985443 PP

                 HH...HHHHHHC---CHHHHHHHHHCT--HHHHHHHHHCCTSEEEEEHHHHTSCCCHHHHHT..GCGCEEEECTCCCHHHHHHHCC-EEEECHHH CS
      DEAD_2  85 kl...kkllleevvdiedlvelgeklklCPYylsrelledadiiilpYqyLldekireslkgislknsivilDEAhNiedvceeaasveiseesl 176
                  +   ++++l+++ diedl+ lg+++++CPYy+sr++++ a+i++lpY +Ll++++r++l  islk  +vi+DEAhN+ d + +++s++is ++l
  KHJ30581.1 321 LVhtfRDHTLAGIQDIEDLSTLGKNIGICPYYASRAAIKPAEIVTLPYPLLLQKSARDALG-ISLKGHVVIIDEAHNLMDSISNTYSTQISLKQL 414
                 333469******************************************************6.*****************************9987 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.1   0.00089       2.6       4      46 ..      26      72 ..      23     193 .. 0.66
   2 !    6.1   0.0    0.0029       8.5     123     143 ..     387     410 ..     361     424 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00089
                HHHHHHHHH....TTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTST CS
                xxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  4 Qaeaiplil....gggdvlvaaeTGsGKTlaflipvlqivyetkgkt 46
                Q+  +++++    ++g  +++ +TG+GK+l  +  +l ++ ++k+k 
  KHJ30581.1 26 QKDFMETVYdileNEGVGILESPTGTGKSLSLICGALTWLRDHKKKA 72
                55555554444445557789*************99999886653333 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0029
                 EEEEEETHHHHHHT...TTHHHHH CS
                 xxxxxxxxxxxxxx...xxxxxxx RF
        DEAD 123 rflVlDEadrlldq...gfsdfin 143
                  ++++DEa++l+d+    +s +i+
  KHJ30581.1 387 HVVIIDEAHNLMDSisnTYSTQIS 410
                 479**********94333333333 PP

>> Ribosomal_L34e  Ribosomal protein L34e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.9   5.1e-06     0.015      35      93 ..     781     838 ..     773     839 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 5.1e-06
  Ribosomal_L34e  35 kkkkgkapkCgdckkkL.qGipalrpkelsrlsktkktvsRaYGgslcakcvkerivraf 93 
                      +kk+ +++++++k+++ +Gip+  + e  +  kt+k vsR Y    c ++v++ i ra+
      KHJ30581.1 781 SHKKQLHAQSSKSKNTIeKGIPNTEKVE--SKTKTAKDVSREYYENACMRAVNQSIGRAI 838
                     4556666666666666636999776655..567***********************9985 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0      0.02        60       4      22 ..      39      57 ..      35     165 .. 0.90
   2 ?    8.3   0.0   0.00086       2.6      92     106 ..     386     408 ..     367     432 .. 0.67

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.02
      AAA_22  4 tagilvvtGesGtGKTtll 22
                ++g++++  ++GtGK+++l
  KHJ30581.1 39 NEGVGILESPTGTGKSLSL 57
                78999999********986 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00086
      AAA_22  92 ielliiDEaqhlr...s.....e 106
                  +++iiDEa++l+   s     +
  KHJ30581.1 386 GHVVIIDEAHNLMdsiSntystQ 408
                 489********976552334343 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0   0.00073       2.2      11      49 ..      32      70 ..      24      82 .. 0.81
   2 ?    2.2   0.0     0.034     1e+02     115     134 ..     381     400 ..     376     411 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00073
                HHHHHHHH-SEEEEE--TTSSTTHHHHHHHHHHHHTTS- CS
        PhoH 11 eylealkkndivfaiGpaGtGKtylavalavealkkkkv 49
                +++++l+++ + +   p+GtGK++  ++ a++ l+++k 
  KHJ30581.1 32 TVYDILENEGVGILESPTGTGKSLSLICGALTWLRDHKK 70
                566778899999************999999999987554 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.034
                 T--B-SEEEEE-SGGG--HH CS
        PhoH 115 GrTlndafvilDEAQnttke 134
                 G +l+  +vi+DEA n+  +
  KHJ30581.1 381 GISLKGHVVIIDEAHNLMDS 400
                 6789999*********9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (897 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1001  (0.0558313); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.72u 0.24s 00:00:00.96 Elapsed: 00:00:00.42
# Mc/sec: 6474.94
//
Query:       KHJ30582.1  [L=442]
Description: putative rna recognition domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.5e-28   97.7   0.9    7.2e-16   57.8   0.1    3.3  3  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    2.3e-06   27.6   0.0    4.8e-05   23.4   0.0    2.6  3  RRM_7         RNA recognition motif
    0.00011   22.0   0.0    0.00065   19.5   0.0    2.2  2  RRM_occluded  Occluded RNA-recognition motif
     0.0012   18.5   0.0     0.0031   17.1   0.0    1.7  1  RRM_5         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
     0.0062   16.5   0.0       0.24   11.4   0.0    2.4  2  Nup35_RRM     Nup53/35/40-type RNA recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.0   2.9e-10     1e-06      15      69 ..      19      70 ..      13      71 .. 0.93
   2 !    8.5   0.0   0.00049       1.8      10      62 ..      91     146 ..      89     151 .. 0.82
   3 !   57.8   0.1     2e-19   7.2e-16       1      70 []     185     258 ..     185     258 .. 0.96

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 2.9e-10
                HHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1 15 LkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69
                + e+F++fG +  +k+ rd   k+++faf+++++ e+Ae A++   g+ ++gr++
  KHJ30582.1 19 VLEVFREFGTV-FVKIRRD--AKHMPFAFCQYTNDENAELAIKDGRGRLIKGRPC 70
                5789*******.9999998..*******************************987 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00049
                 SSHHHHHHHHHTTSCEEEEEEEEE...TTTSEEEEEEEEESSHHHHHHHHHHHTTE CS
       RRM_1  10 vteeeLkelFskfGpiksiklvrd...etgkskgfafVeFeskedAekAlealngk 62 
                 vt +e++ l+++fG+ ++++  +     t++      V+F+  e+ ++A +a+ + 
  KHJ30582.1  91 VTPDEVRNLLRNFGKLTECRPATHlemVTNNLGEGVVVNFDMFESGKNACQAFRNH 146
                 89******************999988777777777788888888888888877665 PP

  == domain 3  score: 57.8 bits;  conditional E-value: 2e-19
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE....TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd....etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 +fVgnLp+++++ e+k +Fsk+G+i +++++++       ++++fafV+F s+ + ekA+ +ln   l+g++++
  KHJ30582.1 185 IFVGNLPTEINDLEVKNIFSKYGEIIDVTIYKNesnfDPSSKHCFAFVQFSSQPSVEKAITELNCSLLQGKTIR 258
                 8********************************99888889999***************************996 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.15   5.4e+02      16      38 ..      17      39 ..      13      53 .. 0.83
   2 ?   -2.8   0.0         2     7e+03      13      29 ..      91     107 ..      89     121 .. 0.82
   3 !   23.4   0.0   1.3e-08   4.8e-05       2      69 ..     183     246 ..     182     270 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.15
       RRM_7 16 eelkatfkefgkvlvdwPkkaes 38
                +++ + f+efg+v v   + a++
  KHJ30582.1 17 AAVLEVFREFGTVFVKIRRDAKH 39
                578899********998887776 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2
       RRM_7  13 iteeelkatfkefgkvl 29 
                 +t +e+ + +++fgk++
  KHJ30582.1  91 VTPDEVRNLLRNFGKLT 107
                 78899999999999975 PP

  == domain 3  score: 23.4 bits;  conditional E-value: 1.3e-08
       RRM_7   2 rkvFvGGlPiDiteeelkatfkefgkvlvdwP.kkaeskkkaaenskaakgyvflvfedeksvkaLlea 69 
                 r +FvG lP++i++ e+k+ f+++g+++ d    k+es+       ++++ ++f+ f+++ sv++ +++
  KHJ30582.1 183 RSIFVGNLPTEINDLEVKNIFSKYGEII-DVTiYKNESNFDP----SSKHCFAFVQFSSQPSVEKAITE 246
                 679**********************974.5440344444443....46789************998875 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.7   6.3e+03      12      30 ..      90     107 ..      90     121 .. 0.82
   2 !   19.5   0.0   1.8e-07   0.00065       2      72 ..     183     261 ..     182     264 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.7
  RRM_occluded  12 tvnkariralveekegeik 30 
                   tv+ +++r+l+ +  g+++
    KHJ30582.1  90 TVTPDEVRNLLRNF-GKLT 107
                   79999999999988.6665 PP

  == domain 2  score: 19.5 bits;  conditional E-value: 1.8e-07
  RRM_occluded   2 rtisllplsDtvnkariralveekegeikkivL.........vpdheGAivefkdekiagkasLaLdgsefegkklrcGt 72 
                   r+i + +l+  +n+ +++++++++ gei ++ +          ++h  A+v+f+++ ++ ka+ +L+ s ++gk++r+++
    KHJ30582.1 183 RSIFVGNLPTEINDLEVKNIFSKY-GEIIDVTIyknesnfdpSSKHCFAFVQFSSQPSVEKAITELNCSLLQGKTIRVSQ 261
                   788899******************.99999988333333333467888*****************************986 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   8.7e-07    0.0031      34     106 ..     190     268 ..     178     281 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 8.7e-07
       RRM_5  34 lepdkvnldklFnlfclYgnvervkflkt........kketalvqmgdasaveravqHLnnaklfgkrlevalSKqqavse 106
                 l p ++n  ++ n+f+ Yg++  v + k+        k+  a+vq +++ +ve+a++ Ln   l gk ++v   K  +++ 
  KHJ30582.1 190 L-PTEINDLEVKNIFSKYGEIIDVTIYKNesnfdpssKHCFAFVQFSSQPSVEKAITELNCSLLQGKTIRVSQ-KDSEIAR 268
                 4.4567888999***************97333322224557***************************99863.5666655 PP

>> Nup35_RRM  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.038   1.4e+02      17      40 ..      13      34 ..      11      68 .. 0.81
   2 !   11.4   0.0   6.7e-05      0.24      23      85 ..     199     258 ..     179     274 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.038
                GGGHHHHHHHHHTTS-BSS--CCC CS
   Nup35_RRM 17 esianevlehFskfGeiledvqvl 40
                e+ a  vle F +fG++  ++   
  KHJ30582.1 13 EALAAAVLEVFREFGTVFVKI--R 34
                677899**********98765..3 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 6.7e-05
                 HHHHHHTTS-BSS--CCC------------EETTEEEEEBS-HHHHHHHHTT.TTEEETTEEEE CS
   Nup35_RRM  23 vlehFskfGeiledvqvlklgkglnpkpiptgenwvkltYksessaskAlqe.ngtilngsliv 85 
                 v + Fsk+Gei++   + k+  +++p+   ++  +  ++++s+ s +kA+ e n  +l+g++i 
  KHJ30582.1 199 VKNIFSKYGEIIDVT-IYKNESNFDPS---SKHCFAFVQFSSQPSVEKAITElNCSLLQGKTIR 258
                 5678********986.99999999886...67899999************88688899998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 3027.29
//
Query:       KHJ30583.1  [L=295]
Description: putative glycosyl [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       802  (0.044732); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2167.74
//
Query:       KHJ30584.1  [L=269]
Description: hypothetical protein EV44_g3904 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-08   33.9   0.1    9.2e-08   32.3   0.0    1.8  2  rve              Integrase core domain
    1.9e-05   24.4   2.6    1.9e-05   24.4   2.6    1.8  1  gag_pre-integrs  GAG-pre-integrase domain
  ------ inclusion threshold ------
      0.032   14.5   0.1        0.1   12.9   0.0    1.8  2  DUF1108          Protein of unknown function (DUF1108)


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.53   3.2e+03     102     116 ..      41      55 ..      20      57 .. 0.81
   2 !   32.3   0.0   1.5e-11   9.2e-08       7     117 ..     125     229 ..     120     231 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.53
         rve 102 pqdnGkvErfhrtlk 116
                  q n ++E+ +++l 
  KHJ30584.1  41 IQNNNIIEKHFKYLT 55 
                 588999999999986 PP

  == domain 2  score: 32.3 bits;  conditional E-value: 1.5e-11
         rve   7 lwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpqdn 105
                  + vD+++++     g++  l+v+d ++r+  a +l+d +++s ++al  + ++ + g  p+ ++   g+ +t+k+f++ + +l ir +  ++  +++ 
  KHJ30584.1 125 TILVDIMYLE-----GNVLTLHVIDEATRYQAARFLKDVSSQSIWQALRLCWIDVYVGP-PDLIIHEAGTNFTAKDFQQNAVSLAIRTKCVPVEAAHSI 217
                 4556666666.....57999**************************************9.*************************************** PP

         rve 106 GkvErfhrtlkd 117
                 G+vEr h+ l++
  KHJ30584.1 218 GLVERYHGPLRR 229
                 ********9997 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   2.6   3.2e-09   1.9e-05      20      64 ..      55     104 ..      31     105 .. 0.68

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 3.2e-09
  gag_pre-integrs  20 nkssinlWHrRLGHpsfsrlkkLfk.kgllpglkisk....sevCeaCql 64 
                      ++ ++n+ HrR+GHps+  l+k+ +  g++++ +++     s +C++Cql
       KHJ30584.1  55 TEGDLNRLHRRFGHPSVACLHKILQeAGHNDPDNFKTltniSAHCKHCQL 104
                      4678999***************9974333333222222234669*****8 PP

>> DUF1108  Protein of unknown function (DUF1108)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.6   9.4e+03      38      52 ..      36      50 ..      23      62 .. 0.61
   2 ?   12.9   0.0   1.7e-05       0.1      18      66 ..     112     160 ..     100     166 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.6
     DUF1108 38 ledvfldsinvides 52
                 ++v ++  n+i++ 
  KHJ30584.1 36 QNKVQIQNNNIIEKH 50
                455555555555554 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 1.7e-05
     DUF1108  18 fefklavkkr.ddsilvqvkdledvfldsinvideselyialdilrdviy 66 
                 f+fkl   k+ +++ilv+++ le   l +++vide+  y a   l+dv  
  KHJ30584.1 112 FKFKLKDDKNfNHTILVDIMYLEGNVL-TLHVIDEATRYQAARFLKDVSS 160
                 77888776653789*********9877.79************99999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       451  (0.0251548); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 2032.94
//
Query:       KHJ30585.1  [L=183]
Description: hypothetical protein EV44_g0555 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       304  (0.0169558); expected 358.6 (0.02)
Passed bias filter:                      141  (0.00786435); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1436.84
//
Query:       KHJ30586.1  [L=169]
Description: putative mitochondrial 37s ribosomal protein mrps12 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-30  105.7   2.3    1.3e-30  105.3   2.3    1.1  1  Ribosom_S12_S23  Ribosomal protein S12/S23


Domain annotation for each model (and alignments):
>> Ribosom_S12_S23  Ribosomal protein S12/S23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.3   2.3   7.3e-35   1.3e-30       3     114 .]      53     164 ..      50     164 .. 0.90

  Alignments for each domain:
  == domain 1  score: 105.3 bits;  conditional E-value: 7.3e-35
                      ------S-TSST..TSSEEEEEEEEEEEE---TT--S-EEEEEEEET.TSEEEEEEE-SSS..----TT-EEEEEE--.....BTTSTTEEEEB CS
  Ribosom_S12_S23   3 elrkktksdale..gapqkrGvvlekvtveakkPnsAlRkvvrvrLikngkevtafipgegalnfldEhdevlvrGirrkgkavkDlpGvrykv 94 
                      ++ +k  s+al+  +ap+ +Gv++++ t+++kkPnsA Rkv+rvrL+  gk vta+ipgeg  ++ + h++vlvrG+r      +D pGvry++
       KHJ30586.1  53 RKARKAVSPALRvaKAPNLKGVCVKVETTKPKKPNSAERKVARVRLS-TGKLVTAYIPGEG--HNAQQHSVVLVRGGR-----CQDCPGVRYHL 138
                      55667777787522789******************************.*************..***************.....9********** PP

                      ET....S---T..SSSTTTTT----T CS
  Ribosom_S12_S23  95 vk....vagvs..lkalskykkekpk 114
                      v+    + gv   + ++sky+++kpk
       KHJ30586.1 139 VRgaldLGGVGnrQTSRSKYGTKKPK 164
                      ***9996666655899********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1263.09
//
Query:       KHJ30587.1  [L=1075]
Description: putative cell wall biogenesis protein mhp1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        0.2   11.8  11.9        2.7    8.3   0.1    5.7  5  LRR_6     Leucine Rich repeat
        1.4    9.5  14.9         29    5.3   4.6    5.4  5  LRR_4     Leucine Rich repeats (2 copies)
        9.9    6.4   7.2       0.75   10.0   0.9    2.5  2  RMP       Retinal Maintenance


Domain annotation for each model (and alignments):
>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.2      0.29   1.7e+03       2      11 ..     484     493 ..     483     494 .. 0.91
   2 ?    8.3   0.1   0.00046       2.7       8      23 ..     568     583 ..     565     584 .. 0.90
   3 ?    2.4   0.3     0.035   2.1e+02       8      18 ..     595     605 ..     589     606 .. 0.89
   4 ?    4.1   0.1    0.0099        59       4      23 ..     618     637 ..     618     638 .. 0.90
   5 ?   -2.4   0.0       1.2   7.1e+03       3      15 ..     705     717 ..     704     719 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.29
       LRR_6   2 nthLteLdLs 11 
                 +++L++ dLs
  KHJ30587.1 484 CHSLKSIDLS 493
                 89*******9 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00046
       LRR_6   8 LdLsgNdIgDeGaeaL 23 
                 L L+gN+I+ eG++ +
  KHJ30587.1 568 LGLAGNNIQPEGLQHI 583
                 89***********987 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.035
       LRR_6   8 LdLsgNdIgDe 18 
                 LdL+gN++ D+
  KHJ30587.1 595 LDLAGNNLKDQ 605
                 9*******995 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.0099
       LRR_6   4 hLteLdLsgNdIgDeGaeaL 23 
                 +L +L+L+ ++++ e ++ L
  KHJ30587.1 618 SLHSLSLAKCNLSSESMSNL 637
                 699************99877 PP

  == domain 5  score: -2.4 bits;  conditional E-value: 1.2
       LRR_6   3 thLteLdLsgNdI 15 
                 ++L +++++gN +
  KHJ30587.1 705 PSLAHVNIMGNPL 717
                 68999******74 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.13   8.1e+02      22      38 ..     484     496 ..     459     502 .. 0.68
   2 ?    5.1   1.8    0.0053        32       3      36 ..     592     630 ..     590     637 .. 0.76
   3 ?    5.3   4.6    0.0049        29       2      33 ..     618     655 ..     617     661 .. 0.80
   4 ?   -0.1   0.0      0.23   1.4e+03      20      30 ..     670     684 ..     664     695 .. 0.70
   5 ?    2.7   0.3     0.031   1.8e+02      19      39 ..     702     721 ..     677     725 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.13
                 -TT--EEE-.-S----- CS
       LRR_4  22 lpnLkeLdLsgNnlitd 38 
                 + +Lk++dLs      +
  KHJ30587.1 484 CHSLKSIDLSKI----T 496
                 778888888653....4 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0053
                 --EEE--SS---.E-S-HH.H-TT...--EEE-.-S--- CS
       LRR_4   3 LevLdLsnNqlt.diplle.klpn...LkeLdLsgNnli 36 
                  e LdL++N+l+  i  ++ +l+    L++L+L  +nl 
  KHJ30587.1 592 CEGLDLAGNNLKdQIKIIAdSLTEkgsLHSLSLAKCNLS 630
                 5679********444445545999999*99*99888654 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.0049
                 S--EEE--SS---E-S-HH......H-TT--EEE-.-S CS
       LRR_4   2 nLevLdLsnNqltdiplle......klpnLkeLdLsgN 33 
                 +L +L+L+ ++l++ +  +      +l++ k ++Ls+N
  KHJ30587.1 618 SLHSLSLAKCNLSSESMSNlfpvliNLKSFKFINLSNN 655
                 6999*********9999555555668888888***888 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.23
                 H....H-TT--EEE- CS
       LRR_4  20 e....klpnLkeLdL 30 
                 +    +++ Lk+++L
  KHJ30587.1 670 RrylpQMKALKKINL 684
                 434446999*****9 PP

  == domain 5  score: 2.7 bits;  conditional E-value: 0.031
                 HHH-TT--EEE-.-S-----G CS
       LRR_4  19 leklpnLkeLdLsgNnlitdl 39 
                 +  lp+L ++++ gN+l+++l
  KHJ30587.1 702 P-ELPSLAHVNIMGNPLLDTL 721
                 3.4********999*888877 PP

>> RMP  Retinal Maintenance
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.7         1     6e+03      16      62 ..      58     104 ..      43     112 .. 0.42
   2 ?   10.0   0.9   0.00013      0.75      19      78 ..     285     344 ..     228     350 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1
         RMP  16 kkakkkkkeqkkekkkkkssskksvekslkalskkcspvllggssas 62 
                     +k++ ++k+ + + s++k+++  s  +++  +++++l++s+++
  KHJ30587.1  58 LRDVSKHTPTEKRPAVTASQHKRNSWLSNLSSKFISTSTYLQSSHSA 104
                 22232333333333333333333332222222334555577766655 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00013
         RMP  19 kkkkkeqkkekkkkkssskksvekslkalskkcspvllggssasnglgtasskkraCdqL 78 
                  ++kk++kk+++++++++k++ +k  +a+++  ++v++++s as +++ +s+k+++C  L
  KHJ30587.1 285 ISRKKQKKKRNEEERKAKKDQKKKLAEAHGRVPLEVTINHSVASLRTSASSLKQEKCATL 344
                 334455555555555556666677788999999************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1075 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1588  (0.0885716); expected 358.6 (0.02)
Passed bias filter:                      670  (0.0373696); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.84u 0.28s 00:00:01.12 Elapsed: 00:00:00.44
# Mc/sec: 7419.61
//
Query:       KHJ30588.1  [L=260]
Description: hypothetical protein EV44_g0488 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1921.07
//
Query:       KHJ30589.1  [L=744]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.6e-05   24.5   0.2        1.8    8.9   0.0    4.0  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    0.00015   22.4   1.9      0.018   15.9   0.0    4.1  4  WD40         WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.014   1.3e+02      50      90 ..     394     433 ..     365     435 .. 0.78
   2 !    8.9   0.0    0.0002       1.8      32      78 ..     478     535 ..     452     543 .. 0.70
   3 !    7.4   0.1   0.00061       5.4      38      91 ..     567     621 ..     560     622 .. 0.77
   4 ?   -2.2   0.0      0.61   5.5e+03      53      71 ..     695     713 ..     690     723 .. 0.57

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.014
  ANAPC4_WD40  50 gklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                    +L ++ s+g++ l++  +  ++  ++vk+ +a++cl W 
   KHJ30589.1 394 KCILGFGRSNGSLGLMSLFD-SMLPRFEVKQPHAIACLIWR 433
                  348999999****9999876.68999**************6 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0002
  ANAPC4_WD40  32 l.............eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                  +               + + +++ +L+++ dg+++a + +d+ + l++    +++++++ 
   KHJ30589.1 478 VardgwsgsmtllaRISVHTQQICGLSFSADGSMFATGGNDNICCLFKT--NEILNNVQQ 535
                  4444555555555555678999**********************99864..556666655 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.00061
  ANAPC4_WD40  38 dsevrsLaWkp.dgklLavaysdg..evrlldaesgkvvhslsvksekavtclgWge 91 
                  +  v+++a+ p ++ lLa +   +   +++++a+sg  + ++sv+++  vt+l W++
   KHJ30589.1 567 GAAVKAIAFCPwKEGLLATGGGSNdkCIHFYHASSGASLATISVSAQ--VTSLMWSN 621
                  5567777776635667887654442279*****************99..******85 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 0.61
  ANAPC4_WD40  53 Lavaysdgevrlldaesgk 71 
                  ++va sd +++++++  g+
   KHJ30589.1 695 IVVASSDESIKFHEVWAGN 713
                  5666666666666655443 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.12   1.1e+03      19      27 ..     376     384 ..     367     398 .. 0.75
   2 !   15.9   0.0     2e-06     0.018       7      37 ..     493     524 ..     487     525 .. 0.86
   3 ?    1.3   0.1     0.082   7.3e+02      12      37 ..     569     597 ..     560     598 .. 0.64
   4 ?   -1.9   0.0      0.84   7.5e+03      15      36 ..     694     706 ..     689     707 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.12
                 ETTSSEEEE CS
        WD40  19 spdgawlas 27 
                 sp+gawl+s
  KHJ30589.1 376 SPNGAWLTS 384
                 899999865 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 2e-06
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 ++ H + +++l+fs dg+++a+G+ D+ + ++
  KHJ30589.1 493 ISVHtQQICGLSFSADGSMFATGGNDNICCLF 524
                 5779777*****************9*999886 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.082
                 SEEEEEEETTSSE.EEEE..ETTSEEEEE CS
        WD40  12 svtslafspdgaw.lasG..sdDgtvriW 37 
                  v ++af+p +   la+G  s D+ ++++
  KHJ30589.1 569 AVKAIAFCPWKEGlLATGggSNDKCIHFY 597
                 46677665555553578744689999986 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 0.84
                 EEEEETTSSEEEEEETTSEEEE CS
        WD40  15 slafspdgawlasGsdDgtvri 36 
                 +         ++++s D ++++
  KHJ30589.1 694 C--------IVVASS-DESIKF 706
                 4........488889.999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (744 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       305  (0.0170115); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 5215.85
//
Query:       KHJ30590.1  [L=394]
Description: putative protein prenyltransferase alpha subunit repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-27   93.5  12.4      3e-06   26.8   2.0    5.6  5  PPTA      Protein prenyltransferase alpha subunit repeat


Domain annotation for each model (and alignments):
>> PPTA  Protein prenyltransferase alpha subunit repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.4   4.4e-10   7.8e-06       2      26 ..      51      75 ..      51      77 .. 0.94
   2 !   26.8   2.0   1.7e-10     3e-06       2      28 .]     135     161 ..     134     161 .. 0.89
   3 !   22.5   0.0   3.7e-09   6.6e-05       1      26 [.     178     203 ..     178     205 .. 0.95
   4 !   14.4   0.0   1.3e-06     0.024       1      25 [.     220     246 ..     220     249 .. 0.84
   5 !    7.7   0.0   0.00017       3.1       1      27 [.     268     296 ..     268     297 .. 0.78

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 4.4e-10
                HHHHHHHHHH-TT-CHHHHHHHHHH CS
        PPTA  2 LeltekliekdpkNYsaWnyRrwll 26
                ++lt+kl++k+p  Y++Wn Rr +l
  KHJ30590.1 51 FNLTSKLLKKNPEYYTIWNIRRRIL 75
                589*******************998 PP

  == domain 2  score: 26.8 bits;  conditional E-value: 1.7e-10
                 HHHHHHHHHH-TT-CHHHHHHHHHHCH CS
        PPTA   2 LeltekliekdpkNYsaWnyRrwllek 28 
                 L +   l+ k+pk+Y+ WnyR wll++
  KHJ30590.1 135 LRFLFPLMLKFPKCYWLWNYRLWLLQQ 161
                 5677778999***************96 PP

  == domain 3  score: 22.5 bits;  conditional E-value: 3.7e-09
                 HHHHHHHHHHH-TT-CHHHHHHHHHH CS
        PPTA   1 ELeltekliekdpkNYsaWnyRrwll 26 
                 EL+ + kl+ kd +N++ W yRr ++
  KHJ30590.1 178 ELDSVAKLLIKDSRNFHGWGYRRLIV 203
                 999********************998 PP

  == domain 4  score: 14.4 bits;  conditional E-value: 1.3e-06
                 HHHHHHHHHHH.-.TT-CHHHHHHHHH CS
        PPTA   1 ELeltekliek.d.pkNYsaWnyRrwl 25 
                 E+e+t+k+i   +  +N+saW+ R+ l
  KHJ30590.1 220 EFEYTTKMIHApNgLSNFSAWHRRSKL 246
                 9********6668*********66666 PP

  == domain 5  score: 7.7 bits;  conditional E-value: 0.00017
                 HHHHHHHHHHH-..TT-CHHHHHHHHHHC CS
        PPTA   1 ELeltekliekd..pkNYsaWnyRrwlle 27 
                 E++l+ +++++d  p  +saW+y ++l++
  KHJ30590.1 268 EFDLIVSAMYTDsyPYQQSAWFYYQFLMT 296
                 667777777777777779********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3036.96
//
Query:       KHJ30591.1  [L=455]
Description: putative btn1-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.7e-151  504.8   9.1     2e-151  504.6   9.1    1.0  1  CLN3      CLN3 protein
  ------ inclusion threshold ------
        2.3    7.3   3.5        2.8    7.0   0.1    2.1  2  AC_N      Adenylyl cyclase N-terminal extracellular and trans


Domain annotation for each model (and alignments):
>> CLN3  CLN3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  504.6   9.1  2.2e-155    2e-151       2     398 .]      37     439 ..      36     439 .. 0.91

  Alignments for each domain:
  == domain 1  score: 504.6 bits;  conditional E-value: 2.2e-155
        CLN3   2 aFwllGLiNNvlyvviLsAAlDlvgkstpkgvvlladilPsllikllapffi.hkvpysvrvlllvllsalgmllvalsks..lavkllGvvlaslssG 97 
                 aFw++GLiNNv+yv+iLsAAlDlvg+ +pkg+vl+ d++Ps+l+k +ap+f+ hkv+y +r++++++lsa g+l++als++  +++kl Gvv+as+ssG
  KHJ30591.1  37 AFWIFGLINNVSYVIILSAALDLVGPLIPKGLVLVVDVFPSFLVKSIAPYFLiHKVSYPIRIIIMCVLSAGGLLTIALSQQnqIILKLSGVVFASISSG 135
                 8*************************************************988*************************9988899************** PP

        CLN3  98 lGEltfLqlthyykksslaawssGTGaaGlvGallyalltsllglsvkatllvslvlPlllllsyflllekkkskkeakaeeeeeeyekleeeeeeeee 196
                 lGE+++L+lth+y+ sslaaw+sGTGaaG+vGa+ly+llts+l+lsv+ +ll+s++lP++++l++f++l++ + ++++++  +   ++++ +e+ + ++
  KHJ30591.1 136 LGEMSLLGLTHFYGPSSLAAWGSGTGAAGIVGAGLYLLLTSILRLSVRSSLLSSATLPFIMPLAFFCVLPQGPLNRKSQMDYAPLLHAPILDEDGTGSH 234
                 *************************************************************************99999887777666666665555543 PP

        CLN3 197 eseee.elle...seaasaaeeeeeees...selkkslkeklklvksLllkymlPLllVYlaeYliNqgvaptllfpleekpfkslrdqYrvyqvlYql 288
                 +s+e+ +++    ++++s+++  +   s   +++ ++l++k+++++sL+l+ymlPLllVY+aeY+iNqg++ptllfpl+++pf+s+r++Y++y +lYq+
  KHJ30591.1 235 CSDETpHSMPitdNSTNSHSNIVS---ShghNTVPNELSTKIRYLRSLFLPYMLPLLLVYIAEYTINQGITPTLLFPLDKTPFSSYRSFYPTYAFLYQT 330
                 222220222200022222222222...1455899999************************************************************** PP

        CLN3 289 gvfisRssvsllrirklyllsllQvlnlvllllealyelflpsiylvfllilyeGllGGaaYvntfaeiseevekeerefslgavsvsDslGillagll 387
                 gvfisRss++++++++ly++sllQvlnlvll+++aly +flp + ++f++ ++eGllGGa+Yvntfa+i+++ + eere+sl+a++vsDs+Gil+ag++
  KHJ30591.1 331 GVFISRSSLPFFTLNSLYIPSLLQVLNLVLLTMQALY-FFLPFVEIIFVITFWEGLLGGAVYVNTFAAIMRNRNGEEREWSLAATTVSDSAGILIAGII 428
                 *************************************.66*********************************************************** PP

        CLN3 388 alplenalCkl 398
                 ++ +e++lC++
  KHJ30591.1 429 GIFIEPQLCEW 439
                 *********86 PP

>> AC_N  Adenylyl cyclase N-terminal extracellular and transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.5     0.026   2.4e+02     210     238 ..      32      60 ..      22      75 .. 0.80
   2 ?    7.0   0.1   0.00031       2.8     191     274 ..     341     430 ..     336     437 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.026
        AC_N 210 cvvmlafhaargplevsyvvvlslailli 238
                 + +m af   +   +vsyv++ls+a+ l+
  KHJ30591.1  32 IRMMAAFWIFGLINNVSYVIILSAALDLV 60 
                 45677888888888***********9775 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.00031
        AC_N 191 ffrlnqssltmlmavlvlvcvvmlafhaargplevsyvv.....vlslaillilvlavlcnrnafhqdhmwla.cyavilvvlavqvvgv 274
                 ff ln   +  l+ vl lv++ m a++   + +e+ +v+     +l  a+++    a++ nrn+  ++    a   +  + +l+  ++g+
  KHJ30591.1 341 FFTLNSLYIPSLLQVLNLVLLTMQALYFFLPFVEIIFVItfwegLLGGAVYVNTFAAIMRNRNGEEREWSLAAtTVSDSAGILIAGIIGI 430
                 99*********************************9998222223577999999999999*99977765433302333456666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (455 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      211  (0.0117686); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.37
# Mc/sec: 3681.93
//
Query:       KHJ30592.1  [L=270]
Description: putative virulence effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       553  (0.0308439); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 2062.49
//
Query:       KHJ30593.1  [L=190]
Description: putative calcineurin regulatory subunit b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-25   86.5  12.7    1.4e-07   30.6   0.7    4.3  4  EF-hand_1     EF hand
    2.7e-23   82.2  11.8    1.4e-13   51.1   0.8    2.7  3  EF-hand_7     EF-hand domain pair
    6.2e-20   69.4   6.3    0.00012   21.7   0.0    4.4  4  EF-hand_6     EF-hand domain
    2.3e-16   58.4  12.0    6.5e-07   28.6   0.4    4.4  4  EF-hand_5     EF hand
    1.8e-12   46.9  12.1    6.6e-05   22.7   0.5    4.3  4  EF-hand_8     EF-hand domain pair
    3.9e-06   26.7   7.1     0.0038   17.2   0.4    3.9  4  EF-hand_4     Cytoskeletal-regulatory complex EF hand
    7.3e-06   26.3   0.0      0.025   14.9   0.0    2.3  2  SPARC_Ca_bdg  Secreted protein acidic and rich in cysteine Ca
  ------ inclusion threshold ------
       0.22   11.7   1.4       0.98    9.7   1.2    2.3  1  Dockerin_1    Dockerin type I domain


Domain annotation for each model (and alignments):
>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   7.4e-09   1.7e-05       2      25 ..      26      49 ..      25      51 .. 0.92
   2 !   16.9   0.1   1.5e-06    0.0033       5      28 ..      61      84 ..      58      85 .. 0.89
   3 !   21.6   0.3   4.5e-08    0.0001       2      29 .]      95     122 ..      94     122 .. 0.91
   4 !   30.6   0.7   6.1e-11   1.4e-07       2      27 ..     136     161 ..     135     163 .. 0.92

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 7.4e-09
                HHHHHHHHTTTSSSEEEHHHHHHH CS
   EF-hand_1  2 lkeiFrefDkDgdGkIdfeEfkel 25
                +++ F+++DkD++G+I+++Ef++l
  KHJ30593.1 26 IRKRFMKLDKDNSGTIERDEFLSL 49
                7899*****************875 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 1.5e-06
                HHHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1  5 iFrefDkDgdGkIdfeEfkellkk 28
                ++++fD Dg G +df+Ef++ l++
  KHJ30593.1 61 LIAIFDEDGGGDVDFQEFVSGLSA 84
                6899***************99875 PP

  == domain 3  score: 21.6 bits;  conditional E-value: 4.5e-08
                 HHHHHHHHTTTSSSEEEHHHHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkellkkl 29 
                 l+ +F+++D D+dG+I   E+  +lk++
  KHJ30593.1  95 LRFAFKVYDIDRDGYIGNGELFIVLKMM 122
                 899******************9999875 PP

  == domain 4  score: 30.6 bits;  conditional E-value: 6.1e-11
                 HHHHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkellk 27 
                 +++ ++e+D DgdGkI+feEf ++++
  KHJ30593.1 136 VDKTIMEADLDGDGKISFEEFTKMVE 161
                 7999*******************986 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.2   3.8e-07   0.00084      37      68 ..      14      48 ..       7      51 .. 0.68
   2 !   31.0   0.5   1.1e-10   2.5e-07       3      68 ..      25      80 ..      23      83 .. 0.87
   3 !   51.1   0.8   6.1e-17   1.4e-13       1      70 [.      92     160 ..      92     161 .. 0.90

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 3.8e-07
   EF-hand_7 37 egsklsdeelellfkef...DtdkdGvisfdEFlk 68
                 gs+++++e++++ k f   D+d++G+i +dEFl 
  KHJ30593.1 14 QGSNFDRDEVDRIRKRFmklDKDNSGTIERDEFLS 48
                56777777766665555555888888888888865 PP

  == domain 2  score: 31.0 bits;  conditional E-value: 1.1e-10
   EF-hand_7  3 klkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlk 68
                +++ +F +lD+d++g ++++e+l+l +         ++l      +l+  fD d+ G ++f+EF+ 
  KHJ30593.1 25 RIRKRFMKLDKDNSGTIERDEFLSLPQ------ISSNPLAT----RLIAIFDEDGGGDVDFQEFVS 80
                7999*****************996776......56666665....9******************85 PP

  == domain 3  score: 51.1 bits;  conditional E-value: 6.1e-17
   EF-hand_7   1 eeklkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkef....DtdkdGvisfdEFlkly 70 
                 e+kl+ aFk +D d+dgy+   el  +l+        gs+l d++l++++++     D+d+dG+isf+EF k++
  KHJ30593.1  92 EQKLRFAFKVYDIDRDGYIGNGELFIVLKM-----MVGSNLKDQQLQQIVDKTimeaDLDGDGKISFEEFTKMV 160
                 589********************9989998.....9*******99887777766777*************9986 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   5.3e-08   0.00012       1      24 [.      25      48 ..      25      51 .. 0.92
   2 !   11.9   0.1   7.7e-05      0.17       8      27 ..      64      83 ..      60      89 .. 0.89
   3 !   20.5   0.1   1.3e-07   0.00029       1      28 [.      94     121 ..      94     128 .. 0.90
   4 !   15.8   0.1   4.2e-06    0.0095       9      27 ..     143     161 ..     138     171 .. 0.88

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 5.3e-08
   EF-hand_6  1 elreaFklfDkdgdGkidaeElrk 24
                ++r+ F+++Dkd++G+i ++E+ +
  KHJ30593.1 25 RIRKRFMKLDKDNSGTIERDEFLS 48
                5899******************86 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 7.7e-05
   EF-hand_6  8 lfDkdgdGkidaeElrkalr 27
                +fD dg G +d++E+++ l+
  KHJ30593.1 64 IFDEDGGGDVDFQEFVSGLS 83
                7***************9998 PP

  == domain 3  score: 20.5 bits;  conditional E-value: 1.3e-07
   EF-hand_6   1 elreaFklfDkdgdGkidaeElrkalrk 28 
                 +lr aFk +D d+dG+i   El  +l++
  KHJ30593.1  94 KLRFAFKVYDIDRDGYIGNGELFIVLKM 121
                 5899*********************996 PP

  == domain 4  score: 15.8 bits;  conditional E-value: 4.2e-06
   EF-hand_6   9 fDkdgdGkidaeElrkalr 27 
                  D dgdGki++eE+ k+  
  KHJ30593.1 143 ADLDGDGKISFEEFTKMVE 161
                 69************99875 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.1   8.9e-08    0.0002       1      23 [.      26      48 ..      26      50 .. 0.88
   2 !    5.2   0.4    0.0072        16       7      21 ..      64      78 ..      60      83 .. 0.88
   3 !    9.9   0.1   0.00024      0.54       4      17 ..      98     111 ..      95     122 .. 0.85
   4 !   28.6   0.4   2.9e-10   6.5e-07       2      25 .]     137     160 ..     135     160 .. 0.86

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 8.9e-08
                HHHHHHHH-SS-SSCE-HHHHHH CS
   EF-hand_5  1 lkdtFqaiDlNgDGkIskeELkt 23
                +++ F ++D++++G+I ++E+  
  KHJ30593.1 26 IRKRFMKLDKDNSGTIERDEFLS 48
                5677*****************75 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0072
                HH-SS-SSCE-HHHH CS
   EF-hand_5  7 aiDlNgDGkIskeEL 21
                 +D +g G ++++E+
  KHJ30593.1 64 IFDEDGGGDVDFQEF 78
                59************9 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00024
                 HHHHH-SS-SSCE- CS
   EF-hand_5   4 tFqaiDlNgDGkIs 17 
                 +F+  D ++DG+I 
  KHJ30593.1  98 AFKVYDIDRDGYIG 111
                 4***********95 PP

  == domain 4  score: 28.6 bits;  conditional E-value: 2.9e-10
                 HHHHHHH-SS-SSCE-HHHHHHHH CS
   EF-hand_5   2 kdtFqaiDlNgDGkIskeELktlv 25 
                 ++t  ++Dl+gDGkIs+eE+ ++v
  KHJ30593.1 137 DKTIMEADLDGDGKISFEEFTKMV 160
                 349999**************9875 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.1   0.00011      0.24      32      51 ..      30      49 ..      10      51 .. 0.94
   2 !    7.0   0.5    0.0024       5.3      32      50 ..      62      80 ..      59      84 .. 0.87
   3 !   18.0   0.6   8.3e-07    0.0019       2      47 ..      70     114 ..      69     122 .. 0.84
   4 !   22.7   0.5   2.9e-08   6.6e-05      32      54 ..     140     162 ..     117     163 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00011
   EF-hand_8 32 frefDtdgdGkisfeEFcvl 51
                f+++D d++G+i  +EF+ l
  KHJ30593.1 30 FMKLDKDNSGTIERDEFLSL 49
                889**************975 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0024
   EF-hand_8 32 frefDtdgdGkisfeEFcv 50
                +  fD+dg G ++f EF+ 
  KHJ30593.1 62 IAIFDEDGGGDVDFQEFVS 80
                667**************86 PP

  == domain 3  score: 18.0 bits;  conditional E-value: 8.3e-07
   EF-hand_8   2 kgkItreelrrilrilglkk....glseeevdilfrefDtdgdGkisfeE 47 
                 +g ++++e+++     gl      g  e++++  f+  D+d+dG+i+  E
  KHJ30593.1  70 GGDVDFQEFVS-----GLSAfssrGNKEQKLRFAFKVYDIDRDGYIGNGE 114
                 799********.....88888886777888****************8655 PP

  == domain 4  score: 22.7 bits;  conditional E-value: 2.9e-08
   EF-hand_8  32 frefDtdgdGkisfeEFcvller 54 
                 ++e+D+dgdGkisfeEF  ++e+
  KHJ30593.1 140 IMEADLDGDGKISFEEFTKMVEN 162
                 6799*************999985 PP

>> EF-hand_4  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.094   2.1e+02      31      66 ..       9      47 ..       3      52 .. 0.73
   2 ?    3.7   0.1     0.026        58      48      66 ..      61      79 ..      50      85 .. 0.79
   3 !    6.8   0.0    0.0028       6.2      41      72 ..      91     122 ..      83     124 .. 0.86
   4 !   17.2   0.4   1.7e-06    0.0038      34      66 ..     121     157 ..     118     169 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.094
   EF-hand_4 31 vapvlknskleedklekiwd...ladidedgkldfeefc 66
                + ++++ s+++ d++++i +     d d+ g+++ +ef 
  KHJ30593.1  9 LESIVQGSNFDRDEVDRIRKrfmKLDKDNSGTIERDEFL 47
                567889999999988888542114577788899999985 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.026
   EF-hand_4 48 iwdladidedgkldfeefc 66
                +  + d d  g++df+ef+
  KHJ30593.1 61 LIAIFDEDGGGDVDFQEFV 79
                55566888899*******8 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0028
   EF-hand_4  41 eedklekiwdladidedgkldfeefciamrli 72 
                 +e+kl   +++ did dg +   e+ i+++++
  KHJ30593.1  91 KEQKLRFAFKVYDIDRDGYIGNGELFIVLKMM 122
                 67899999****************99999986 PP

  == domain 4  score: 17.2 bits;  conditional E-value: 1.7e-06
   EF-hand_4  34 vlknskleedklekiwdl....adidedgkldfeefc 66 
                 ++  s+l++++l++i d     ad+d dgk+ feef+
  KHJ30593.1 121 MMVGSNLKDQQLQQIVDKtimeADLDGDGKISFEEFT 157
                 677899******99987433448*************7 PP

>> SPARC_Ca_bdg  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00064       1.4      53     111 ..      23      79 ..       6      81 .. 0.89
   2 !   14.9   0.0   1.1e-05     0.025      53     112 ..      92     158 ..      84     159 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00064
  SPARC_Ca_bdg  53 kepvawkFsklDtnsdkvlsksELaplraplvklehCikpflescDadkdkkislkEwc 111
                   ++ ++ +F klD+++ +++++ E  +l +  ++ +   ++++   D d  ++++ +E++
    KHJ30593.1  23 VDRIRKRFMKLDKDNSGTIERDEFLSLPQ--ISSNPLATRLIAIFDEDGGGDVDFQEFV 79 
                   6778889*****************99999..9999**********************97 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1.1e-05
  SPARC_Ca_bdg  53 kepvawkFsklDtnsdkvlsksELaplraplv.......klehCikpflescDadkdkkislkEwce 112
                   ++++++ F+  D ++d+++ + EL  + + +v       +l++ +++ ++++D+d d+kis +E+++
    KHJ30593.1  92 EQKLRFAFKVYDIDRDGYIGNGELFIVLKMMVgsnlkdqQLQQIVDKTIMEADLDGDGKISFEEFTK 158
                   57899*******************9877665433322336788999999***************985 PP

>> Dockerin_1  Dockerin type I domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.2   0.00044      0.98       3      46 ..     103     152 ..     101     163 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00044
                 ETTSSSC-SHHHHHHHHHHCT......SSEBTTSCCCHGGGSTT-SSCES CS
  Dockerin_1   3 DVNgDgkVnalDalliinyln......qregqssssngkaaDvNgDGrvn 46 
                 D+++Dg +    + ++ + +       q+ +q  ++    aD++gDG+++
  KHJ30593.1 103 DIDRDGYIGNGELFIVLKMMVgsnlkdQQLQQIVDKTIMEADLDGDGKIS 152
                 88888888888888888888888888888999999*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1387.13
//
Query:       KHJ30594.1  [L=543]
Description: putative glycosyl [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        0.1   12.0   0.0        0.2   11.0   0.0    1.4  1  DUF4527   Protein of unknown function (DUF4527)


Domain annotation for each model (and alignments):
>> DUF4527  Protein of unknown function (DUF4527)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   1.1e-05       0.2     116     162 ..     180     226 ..     173     273 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 1.1e-05
     DUF4527 116 rsmvdDvAlAeYaatFlapgvpetshhldvesektalvraqkcllnp 162
                 + m++D Al  Y atF + + p++s   +    + + ++ q+++l  
  KHJ30594.1 180 KVMLKDAALQHYHATFNSENPPDLSTLYQTIKSNFEGKEYQQSMLVK 226
                 679*********************99866655555555555555433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (543 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       770  (0.0429472); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 4013.35
//
Query:       KHJ30595.1  [L=583]
Description: putative gpi transamidase component gpi16 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.3e-237  788.9   0.0   2.7e-237  788.7   0.0    1.0  1  Gpi16     Gpi16 subunit, GPI transamidase component


Domain annotation for each model (and alignments):
>> Gpi16  Gpi16 subunit, GPI transamidase component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  788.7   0.0  1.5e-241  2.7e-237       3     557 ..       8     561 ..       6     563 .. 0.97

  Alignments for each domain:
  == domain 1  score: 788.7 bits;  conditional E-value: 1.5e-241
       Gpi16   3 lllllaasveaaeeysEeLlLrpLpdskllasfeFesetslaefeaqhfrlfPrslgqilqkanvrelhlrftqGrWdaeswgarplnglkeggtGvel 101
                 +ll+++ +v ++++y+E+L LrpL+ s llasf+F+s+++l+ef++q+fr+fPrslgqil+++n++elhlrf+ GrWdae+wgarp+ g+keggtGvel
  KHJ30595.1   8 ILLCFILQVISSSDYHEQLILRPLNPSLLLASFNFKSNSTLTEFNQQNFRYFPRSLGQILKHTNTKELHLRFSLGRWDAERWGARPWGGSKEGGTGVEL 106
                 67888999999**************************************************************************************** PP

       Gpi16 102 wavleaetdeeadakwlkLtnaLsGlfCaslnfidstrttrPalsfqpegdhses..eklkllygslPrevvCtENLtpflkLLPckgkaGissLLdgh 198
                 wa++eaet+e+ad+kwl LtnaLsGlfCaslnfidst+ttrP+++fqp+g+h  +  e+l+ll+g+lP evvCtENLtpflkLLPck kaGissLLdgh
  KHJ30595.1 107 WAWIEAETKEKADEKWLILTNALSGLFCASLNFIDSTKTTRPVMTFQPSGKHYFRtlENLNLLHGALPGEVVCTENLTPFLKLLPCKAKAGISSLLDGH 205
                 ***************************************************987789****************************************** PP

       Gpi16 199 klfdasyqsmsidvrpvceeeeseckleleqtidlvldverskrkrdnpiprptpadelkCdtsk.........Pldk.aeeqewsLeelFgrklkgac 287
                 klfda++qsmsidv p+c +e++e +l++ qtid+v+d++rskr+rdnpiprp+p +el+Cd+sk         Pl++   e++wsL+ +Fgr+lkg c
  KHJ30595.1 206 KLFDANWQSMSIDVLPIC-SETREFQLQIIQTIDMVVDIQRSKRPRDNPIPRPVPREELRCDQSKpynsedtcfPLNNsDLEENWSLSGIFGRQLKGPC 303
                 ******************.9999***************************************************99986889***************** PP

       Gpi16 288 pl......evclevaksskvyvqrkaseeakeakkedesskallsykleeekefdlaltskeaskeapleepllyaersltgsgqerGglqiiltnpsa 380
                 pl      +vc+ v++s+++++     ++++e+k++ ++    ++y+l ++++f++ l+++e s++ ple+pllyaers++g+gqerGg+q+il nps 
  KHJ30595.1 304 PLatdnayPVCIIVPHSRDIFT----FANTREHKNQAGDM---RCYELGQNEDFEMILPQQELSEKIPLEQPLLYAERSFIGYGQERGGVQAILINPSL 395
                 **9998877*************....77788777777776...******************************************************** PP

       Gpi16 381 seevefvyfeslPWfvrvylhtLkvelddkaekksesevikelyyrPaldrkrptqlelllelPaestvvltydfekaiLryteYpPDAnrGfdiaaAv 479
                 +e+ve+vyfe+lPWf+++ylhtLk ++++      ++++i e+yyrPaldrkr+t le+++ +Pa+stvvltydfek++LryteYpPDAnrGfd+a+Av
  KHJ30595.1 396 TESVEIVYFETLPWFMKLYLHTLKSRINGL-----NKDIILEMYYRPALDRKRGTLLEIKMLIPANSTVVLTYDFEKTVLRYTEYPPDANRGFDVAPAV 489
                 *****************************9.....99************************************************************** PP

       Gpi16 480 itvleeksseavelrttslLlsLptPDfSMPYNViiltsTvlaLafGslfnlltrrfvaeeeaeekskkslkaklkek 557
                 it+ +       ++rttslLlsLptPDfSMPYNViiltsTv+aL+fG +fn+++rrfva +eae+ + + ++ +l + 
  KHJ30595.1 490 ITIGN------FSIRTTSLLLSLPTPDFSMPYNVIILTSTVMALTFGFIFNIIVRRFVALDEAEKWDFRVVRFRLAAV 561
                 **986......789***************************************************9998888877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (583 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 4021.34
//
Query:       KHJ30596.1  [L=272]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      273  (0.0152267); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1890.58
//
Query:       KHJ30597.1  [L=291]
Description: putative abhydrolase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-21   77.2   0.1      1e-19   71.2   0.1    2.1  1  Abhydrolase_1  alpha/beta hydrolase fold
    1.4e-09   38.9   0.0      2e-09   38.4   0.0    1.3  1  Abhydrolase_6  Alpha/beta hydrolase family
    2.3e-05   23.8   0.1    3.6e-05   23.1   0.1    1.5  1  Hydrolase_4    Serine aminopeptidase, S33
    0.00017   21.4   0.6      0.095   12.4   0.6    2.2  1  PGAP1          PGAP1-like protein
     0.0014   18.4   0.1     0.0018   17.9   0.1    1.4  1  Esterase       Putative esterase
  ------ inclusion threshold ------
      0.023   14.9   0.5       0.16   12.1   0.1    2.1  2  DUF4783        Domain of unknown function (DUF4783)
      0.039   13.5   0.0      0.065   12.7   0.0    1.3  1  Lipase_2       Lipase (class 2)


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.2   0.1   4.1e-23     1e-19       1     257 []      42     277 ..      42     277 .. 0.82

  Alignments for each domain:
  == domain 1  score: 71.2 bits;  conditional E-value: 4.1e-23
                    SEEEEE-STTTCGGGGTTGHHHHHHHHT.TSEEEEEEETTSTTSSSTTTGB.CHHSHHHHHHHHHHHHHHCTTSSEEEEEETHHHHHHHHHHHHHG CS
  Abhydrolase_1   1 pvlvilhGlpgssdvwaerglapaLakd.gfdvillDlrGvgySspapacinddygtasvaddldrildalgddkltlvGhSmGGmialayaaeyp 95 
                    ++++++hGl gs  + ++  + + La+d +  v+++Dlr++g S+  +    +dy    +a+d++++  a+ +++ t++GhSmG  +a+++a+  p
     KHJ30597.1  42 NPIIVIHGLFGSKKNNRG--ISKVLARDlRRPVYTIDLRNHGDSPHNSQ---HDYLC--MARDVEAFIIAHSLKNSTIIGHSMGAKTAMMLALVSP 130
                    79*************999..************************66665...88877..9************************************ PP

                    GGEEEEEEESECSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHCHHHCCHHHHHHHC...HHHHHHHHHH CS
  Abhydrolase_1  96 erVkalvllgaidpaaslieaqrqqaksfpdffdgyaadcarnpagplladelaaleqrhrlvdalkfpdkskrfpssgsdna...sslatgalks 188
                      V+ +v+++             +    f  + +g+  ++++n++ ++ ad+    ++           +++++f  ++++     +  + + l  
     KHJ30597.1 131 TLVHDVVSVDN-------APIRNMFQDDFASYIRGMKLVEEQNVFKQSEADKILQNFVK---------SLSVRQFLLGNFYHTekgILRSKVPLDI 210
                    ***********.......55556666788999999999999999999999999888888.........4444444443333330003333344444 PP

                    HHHHHHCCHHHHHHHHHCTHHHHSEEEEEEETTCSSSCHHHHHHHHHCHTSEEEEEEETCSSSHHHHSH CS
  Abhydrolase_1 189 ieqwpttdsaklllrlrelknvlaptlvisgtsDplvppkaledlaqllpkkrlvvisdagHlaflegp 257
                    +++  +++++  +++   +k+ + p+l+i gt+ ++v++++  ++++ +p+ +++v++ a H+++ e+p
     KHJ30597.1 211 LNHSLENLRDFPIRDSS-IKKFINPALFIRGTKSRYVTDDMFHEIEKFFPR-YKLVDVEASHWLISENP 277
                    55555555555554433.477777***************************.***********998875 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.0   7.6e-13     2e-09       1     217 [.      44     280 ..      44     283 .. 0.42

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 7.6e-13
                    EEEE--GC.........GCHHHHHHHHCCTCEEEEE--TTST.S-GGCS--HHH.CHHHHH.HHCCTT..TTSEEEEEETCHHHHHHHHHHCC... CS
  Abhydrolase_6   1 vlllHGagss....assWlvapLaallaagvhvlapDlpGhG.rsdpppldled.ladlaa.lldelaagggpvvlvGHSlGGalalaaapla... 86 
                    ++++HG+++s    +++     La+ l++ v  +++Dl++hG +++ + +d+   ++d++a ++++     ++  ++GHS+G+  a++   la   
     KHJ30597.1  44 IIVIHGLFGSkknnRGIS--KVLARDLRRPV--YTIDLRNHGdSPHNSQHDYLCmARDVEAfIIAHS---LKNSTIIGHSMGAKTAMM---LAlvs 129
                    689999666533322222..25555555557..********92233344555334577755244444...6999********988888...55444 PP

                    ....EE.EEES-..----TTTS----TTHHHHHHTT-CCCCHCCH................S-HSCCCCHHHCCCCHCHCCCGHH.....HHCCHH CS
  Abhydrolase_6  87 ..lvvg.vlldppptalpagllaaalelllallallrllawlsre................plprlfladedadaawrarlarla.....allagl 158
                      lv+  v +d      +  +++++++++++   ++    + + e                +l   f++     ++ +   + ++     ++l  l
     KHJ30597.1 130 ptLVHDvVSVDN--APIRNMFQDDFASYIRGMKLVEEQNVFKQSEadkilqnfvkslsvrqFLLGNFYH-----TEKGILRSKVPldilnHSLENL 218
                    553333366666..3333333444444444333322222222111122222222322122222224444.....3333333333311111222222 PP

                    C..HTTCCHHTT-TTGC.......EEE.C......TT-CHHHHCHHCCCHSTTEEETCE...SSS-HHHHSHHHH CS
  Abhydrolase_6 159 g..llpaaawadlpvpl.......lvl.g......geDplvprllerllaqagarlpvvlpgaGHlphleepdev 217
                       + + +        +       l + g      ++D+ +   +e++   ++++l v ++ a+H++  e+p+++
     KHJ30597.1 219 RdfPIRDSS-------IkkfinpaLFIrGtksryvTDDMFHE--IEKFF--PRYKL-VDVE-ASHWLISENPEDF 280
                    211111222.......12233332333331111114444333..33333..33333.3333.6777777777665 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.1   1.4e-08   3.6e-05       8     105 ..      45     137 ..      40     246 .. 0.82

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 1.4e-08
  Hydrolase_4   8 vlvHGlaehsgryaelaeaLaaq.GfavyalDhrGhGrsegkrghvpsfddyvdDlaafvekvkeehpelplfllGhSmGGliallyllrypdkvagl 104
                  +++HGl  + +    + + La+     vy++D r hG s ++   ++++  + +D++af+  +   h+ ++ +++GhSmG+ +a+ ++l  p  v+ +
   KHJ30597.1  45 IVIHGLFGSKKNNRGISKVLARDlRRPVYTIDLRNHGDS-PHNS-QHDYLCMARDVEAFI--I--AHSLKNSTIIGHSMGAKTAMMLALVSPTLVHDV 136
                  566666666666666666666542346************.5555.799***********7..3..35566789************9999888866655 PP

  Hydrolase_4 105 i 105
                  +
   KHJ30597.1 137 V 137
                  5 PP

>> PGAP1  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.6   3.7e-05     0.095       5     129 ..      42     144 ..      39     217 .. 0.57

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.7e-05
       PGAP1   5 ipVlFvpGnagsykqvrslAseaaeayqelrkllknqnkkeldfftvdfneelsaldGrtlldqaeylndaIkyIlslysssekeptsviliGHSmGGi 103
                  p++ ++G++gs k+ r ++++ a+       +l++        +t+d+ +     +    + q +yl   +++  + +  ++   ++  +iGHSmG +
  KHJ30597.1  42 NPIIVIHGLFGSKKNNRGISKVLAR-------DLRRPV------YTIDLRNHGDSPH----NSQHDYLC--MARDVEAFIIAHSL-KNSTIIGHSMGAK 120
                 5888888888888888888888732.......233322......4444443322221....23444432..22222223222222.3335678888855 PP

       PGAP1 104 varaaltlknyikqsvntiltla.sPh 129
                  a   ++l+ + +  v+ +++++ +P+
  KHJ30597.1 121 TA---MMLALVSPTLVHDVVSVDnAPI 144
                 55...4444445566666666654555 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   7.2e-07    0.0018     117     146 ..     110     139 ..      31     179 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 7.2e-07
                 EEEEEETHHHHHHHHHHHCSTTTCCEEEEE CS
    Esterase 117 ravaGqSmGGlgALilalkhpdrFgsvssf 146
                  +++G+SmG+ +A++lal +p++   v s 
  KHJ30597.1 110 STIIGHSMGAKTAMMLALVSPTLVHDVVSV 139
                 68********************99999886 PP

>> DUF4783  Domain of unknown function (DUF4783)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   6.4e-05      0.16      26      58 ..     159     191 ..     151     200 .. 0.89
   2 ?    0.2   0.0      0.32   8.3e+02      28      63 ..     238     273 ..     233     283 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 6.4e-05
     DUF4783  26 lsilgkkndysksqAeqilkdFFkknppksfki 58 
                 +++ +++n++++s+A +il++F k+ ++++f +
  KHJ30597.1 159 MKLVEEQNVFKQSEADKILQNFVKSLSVRQFLL 191
                 567899***********************9965 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.32
     DUF4783  28 ilgkkndysksqAeqilkdFFkknppksfkikhkgk 63 
                 i g+k++y   +    +++FF +++  +++ +h   
  KHJ30597.1 238 IRGTKSRYVTDDMFHEIEKFFPRYKLVDVEASHWLI 273
                 6666667766677777899*****999999888655 PP

>> Lipase_2  Lipase (class 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.6e-05     0.065       2      87 ..      42     120 ..      41     127 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.6e-05
    Lipase_2   2 ePviivhGnsdlaaeklskliqkflekgyteaelYattygdteestslerlekCeyvkqlRklilaVlkyTgakkvdivahsmGvp 87 
                 +P+i++hG ++  ++k ++ i+k l ++  +  +Y++   +  +s   +++   +y+   R+   ++ +   + +  i++hsmG+ 
  KHJ30597.1  42 NPIIVIHGLFG--SKKNNRGISKVLARDL-RRPVYTIDLRNHGDSPHNSQH---DYLCMARDVEAFIIAHSLK-NSTIIGHSMGAK 120
                 7********98..6677778888889995.559*****9999985555555...5888889877777777777.889*******86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 1965.77
//
Query:       KHJ30598.1  [L=535]
Description: putative ribose-phosphate pyrophosphokinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.3e-42  142.2   0.2    1.9e-40  137.4   0.0    2.4  2  Pribosyltran_N  N-terminal domain of ribose phosphate pyropho
    3.1e-35  121.9   0.1    1.2e-29  103.7   0.0    2.2  2  Pribosyl_synth  Phosphoribosyl synthetase-associated domain
    1.5e-08   34.3   0.0    6.3e-07   29.0   0.1    2.4  2  Pribosyltran    Phosphoribosyl transferase domain


Domain annotation for each model (and alignments):
>> Pribosyltran_N  N-terminal domain of ribose phosphate pyrophosphokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.4   0.0   3.2e-44   1.9e-40       2     116 .]       5     120 ..       4     120 .. 0.98
   2 ?    2.4   0.0     0.024   1.4e+02      36      65 ..     416     445 ..     399     465 .. 0.71

  Alignments for each domain:
  == domain 1  score: 137.4 bits;  conditional E-value: 3.2e-44
  Pribosyltran_N   2 kifagssskeLaekiakrlgvelgkakvsrfadgEikveieesvrgkdvfiiqslskpvndnlmelllmidalrrasakritaViPylgysrqdr 96 
                      ifagss+++L ++i++rl ++ + +++s+fa+gE++v+i +s+r+kdvf++qs s+ +nd++mell++i+a++ +sa++itaV+Py++ysrq++
      KHJ30598.1   5 LIFAGSSCPALTSSICSRLSTSPAPVELSQFANGETSVKILTSIREKDVFVVQSGSSRINDSIMELLILISACKGGSANKITAVLPYFPYSRQSK 99 
                     69********************************************************************************************* PP

  Pribosyltran_N  97 k.ksrepisaklvaklLeaaG 116
                     k ++r +i+a+++a+lL+ aG
      KHJ30598.1 100 KkSHRGSITARMLANLLSIAG 120
                     *677*************9988 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.024
  Pribosyltran_N  36 Eikveieesvrgkdvfiiqslskpvndnlm 65 
                     E  +++  +vr+++vfi+ ++ +++   + 
      KHJ30598.1 416 ERMITLVGDVRNRTVFIVDDMIDKAGSWIA 445
                     556677779**********99877666554 PP

>> Pribosyl_synth  Phosphoribosyl synthetase-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.5e-06    0.0089       2      66 ..     162     226 ..     161     233 .. 0.87
   2 !  103.7   0.0     2e-33   1.2e-29      72     183 ..     416     530 ..     374     531 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.5e-06
                     GGGEEEEESSGGGHHHHHHHHHHTT-EEEEE---------------------------------- CS
  Pribosyl_synth   2 yrnavivakspgsakkatsyaerlrlglavihGeqkeaeadevdgrqsppekkesavekslelpe 66 
                     +++av v+k+ g +k+ ts a+ l+l   +i  ++k+  + +    ++  ++++s++++ +++ +
      KHJ30598.1 162 WHEAVCVSKNAGGTKRVTSLADALKLNFGMITTDKKRGGTRKIPNETTTTKNDNSSMTRPKTIAK 226
                     678*********************************99999988888888888888887776655 PP

  == domain 2  score: 103.7 bits;  conditional E-value: 2e-33
                     -----EES--TTSEEEEEEEEE-S-HHHHHHHHHH.HHTT--EEEEEEEEE---TTHHHHHHH.SS--EEEEESSS--HHHHHT.-TTEEEE--H CS
  Pribosyl_synth  72 kppltvvGdvgGriaiivddliddvesfvaaaevl.kerGaykiyvlathGllssdaprllee.saidevvvtntipheiqklr.cskiktvdis 163
                        +t+vGdv  r   ivdd+id++ s++aaae + k  Ga k+y +athGl+  d+ ++l++  +id +vvtn+ p   +k++ ++k+  +d+s
      KHJ30598.1 416 ERMITLVGDVRNRTVFIVDDMIDKAGSWIAAAECVvKRGGAKKVYCIATHGLFGGDSLEELQDcDCIDTIVVTNSFPISSKKVKaANKLIMLDLS 510
                     4569*****************************651666799***************999977269*************99987258******** PP

                     HHHHHHHHHHHHT---TT-S CS
  Pribosyl_synth 164 lllaeairrihngesmsylf 183
                      ll+eairr h+ges+  lf
      KHJ30598.1 511 HLLSEAIRRNHYGESLCPLF 530
                     ****************9998 PP

>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.014        85      27      68 ..     161     202 ..     143     228 .. 0.77
   2 !   29.0   0.1   1.1e-10   6.3e-07      77     125 ..     404     468 ..     372     498 .. 0.74

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.014
                   -GGGEEEEEEETTTHHHHHHHHHHSTT-EE-EEEEEE-TTT- CS
  Pribosyltran  27 ngkpdvvvgiargGvpfakiladeLevplayvrkvkyrpdgs 68 
                   n+++ v v    gG  +++ lad+L++ + ++   k+r+++ 
    KHJ30598.1 161 NWHEAVCVSKNAGGTKRVTSLADALKLNFGMITTDKKRGGTR 202
                   56666777778899999*******************999875 PP

  == domain 2  score: 29.0 bits;  conditional E-value: 1.1e-10
                   ................EE----TTSEEEEE-SEESSSHHHHHHHH.HHHCC-BSEEEEEEEE..E CS
  Pribosyltran  77 des.............rlledpagkkVliVDDildtGgTllaale.lLkekgpeevriavlv..d 125
                   de              +l +d+++++V+iVDD++d +g+ +aa+e  +k+ g+++v +++ +   
    KHJ30598.1 404 DEEeenfksnqfermiTLVGDVRNRTVFIVDDMIDKAGSWIAAAEcVVKRGGAKKVYCIATHglF 468
                   333455555556667789***************************999******99999887652 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1047  (0.058397); expected 358.6 (0.02)
Passed bias filter:                      566  (0.031569); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 3834.87
//
Query:       KHJ30599.1  [L=490]
Description: putative rrna processing protein bystin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-129  431.9   0.0   1.5e-129  431.5   0.0    1.1  1  Bystin    Bystin


Domain annotation for each model (and alignments):
>> Bystin  Bystin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  431.5   0.0  8.2e-134  1.5e-129       4     290 ..     154     472 ..     151     474 .. 0.93

  Alignments for each domain:
  == domain 1  score: 431.5 bits;  conditional E-value: 8.2e-134
      Bystin   4 rktLadlilekieekeaekesklekee....eeeeeeeldpkvvevYekvgelLsrYksGklpkafkilpslknWeellaltePekWtpnavyeatrif 98 
                  ++Ladlileki+++ea+++s+ +k +    +++ee ++++kv++vY+kvg +LsrYksGklpk+fkilp+++ Wee+l +t PekWtpna+yeat+if
  KHJ30599.1 154 GTNLADLILEKIAAQEASQKSNGQKPQggfqRSHEELQIPEKVIDVYTKVGLILSRYKSGKLPKPFKILPTIPYWEEILDITCPEKWTPNACYEATKIF 252
                 689****************998888778998888999************************************************************** PP

      Bystin  99 vsnlkekkaqrflelvllprvrddieenkkLnvhlyeaLkkalykpaaffkgillPLvesgtctlreaaivgsvlakvsipvlhsaaallklael.... 193
                 +s+ ++ k qrf+e ++lprvrd+i+e+kkLnvhl+++Lkk+ly+paa+fkg+l+PLv+sg+ctlrea+iv++vl +vsipvlhsaaa++ l+++    
  KHJ30599.1 253 ISS-TPIKSQRFMENIILPRVRDQIHETKKLNVHLFNCLKKGLYRPAAWFKGFLFPLVASGSCTLREAHIVSAVLVRVSIPVLHSAAAIKGLCDIaaqe 350
                 ***.99********************************************************************************************* PP

      Bystin 194 .....eysgatslfirvlldKkyaLpykvvdalvfhFlrfr.......eekre................lpvlwhqsllvfaqrYknditedqkeaLld 264
                      e  gat++fi+ ll+KkyaLpy+v+dalvfhFlrfr       +   +                lpv+whq+ll faqrY+nditedq+eaLld
  KHJ30599.1 351 ssaetEGGGATNIFIKALLEKKYALPYQVIDALVFHFLRFRgirneqsD---KmrdeelsrepdiketrLPVIWHQCLLKFAQRYRNDITEDQREALLD 446
                 ***99999*********************************66544330...03334444445555555****************************** PP

      Bystin 265 llkkkkhkkitpeirrellasksrgv 290
                 ll +k+h++i+pe+rrell++++rg 
  KHJ30599.1 447 LLVEKGHHQIGPEVRRELLEGRERGI 472
                 ***********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       894  (0.0498633); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3448.85
//
Query:       KHJ30600.1  [L=103]
Description: putative iron-sulfur cluster biosynthesis protein isd11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.3e-21   73.6   5.0    1.3e-20   73.2   5.0    1.2  1  Complex1_LYR    Complex 1 protein (LYR family)
    1.1e-06   29.3   3.0    1.2e-06   29.1   3.0    1.1  1  Complex1_LYR_2  Complex1_LYR-like
     0.0024   18.4   0.3     0.0031   18.1   0.3    1.2  1  Complex1_LYR_1  Complex1_LYR-like


Domain annotation for each model (and alignments):
>> Complex1_LYR  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.2   5.0   2.1e-24   1.3e-20       1      58 [.      14      71 ..      14      72 .. 0.97

  Alignments for each domain:
  == domain 1  score: 73.2 bits;  conditional E-value: 2.1e-24
  Complex1_LYR  1 rqvLsLYRalLRearkfpdyntreyfrrriRdeFrknkhvtDpekieellkkgreeLe 58
                  rq+ sLYR+lLR +++f +yn+rey+ r++Rd+Fr+n++++Dp kieel++kgr+eL 
    KHJ30600.1 14 RQARSLYRQLLRVSQQFASYNYREYAMRKTRDSFRENQDLRDPAKIEELFQKGRKELT 71
                  6999****************************************************96 PP

>> Complex1_LYR_2  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   3.0     2e-10   1.2e-06       1      66 [.      16      79 ..      16     102 .. 0.84

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 2e-10
  Complex1_LYR_2  1 vlsLYrrllrelrel.ppelrslgdayvraefrrhkhlknpeeialflknqreYaellerynpglkm 66
                    ++sLYr+llr  ++  + + r++  ++ r+ fr++++l +p++i ++ ++ r  + +++r+   +++
      KHJ30600.1 16 ARSLYRQLLRVSQQFaSYNYREYAMRKTRDSFRENQDLRDPAKIEELFQKGRKELTTMKRQ---TTI 79
                    59**********87679********************************************...233 PP

>> Complex1_LYR_1  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.3   5.1e-07    0.0031       2      44 ..      15      55 ..      14      99 .. 0.69

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 5.1e-07
  Complex1_LYR_1  2 eklrlyrallkaarrfPlrsrreivaeevraafrhplndsltt 44
                    +  +lyr+ll+ +++f   + re    + r  fr   n+ l+ 
      KHJ30600.1 15 QARSLYRQLLRVSQQFASYNYREYAMRKTRDSFRE--NQDLRD 55
                    6779******************************4..333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       906  (0.0505327); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 802.87
//
Query:       KHJ30601.1  [L=140]
Description: hypothetical protein EV44_g1745 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0037   17.3   0.8      0.005   16.8   0.8    1.2  1  DUF4942   Domain of unknown function (DUF4942)
  ------ inclusion threshold ------
      0.014   15.1   0.2      0.017   14.8   0.2    1.1  1  DDE_3     DDE superfamily endonuclease
       0.12   12.5   2.2       0.15   12.2   2.2    1.1  1  SPT16     FACT complex subunit (SPT16/CDC68)


Domain annotation for each model (and alignments):
>> DUF4942  Domain of unknown function (DUF4942)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.8   8.4e-07     0.005      21      74 ..      51     104 ..      43     114 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 8.4e-07
     DUF4942  21 fltaaarkevekqleeqakpefsveNIyatfeelvknrkeifergvvevFdkls 74 
                 f ta+  +  ++++++ ++ +f++eNI ++++el+k+ +e +  + + +F++l+
  KHJ30601.1  51 FTTAGFTTYRQQNVQQTTEEKFTMENIHTMLQELYKAITEKVVMENAAMFNALK 104
                 55556666667888999999******************9999999999999987 PP

>> DDE_3  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.2   2.9e-06     0.017      28      96 ..      40     105 ..      21     119 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.9e-06
       DDE_3  28 r.leeygrrgrvnligaldekgglafvtfeetlnaedfaeflerlletalqakkivlilDnasiHksesl 96 
                 + +++++   + +  g+++++++ +  t+ee+++ e++ ++l++l + ++++    +++ na ++++ +l
  KHJ30601.1  40 DyEKSTQPTSSFTTAGFTTYRQQNVQQTTEEKFTMENIHTMLQELYKAITEK----VVMENAAMFNALKL 105
                 44777888889999********9999*************************8....9*****99887665 PP

>> SPT16  FACT complex subunit (SPT16/CDC68)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.2   2.5e-05      0.15      28     128 ..      13     118 ..       4     124 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.5e-05
       SPT16  28 nvskseegdytylrinFnvpgsavgkkeealfknpeaif..ikeltfrskdekk...lqevfreikelkkkvkkreaekkekedlveqekLilskskrk 121
                 nv +se+++ +   +  ++pg+ +++++ +  ++p+  f      t+r+++ ++    + ++++i+++ +++ k  +ek  +e+ +  + L l+++k k
  KHJ30601.1  13 NVYCSEDENLSDYDMGNTQPGQGTQSHDYEKSTQPTSSFttAGFTTYRQQNVQQtteEKFTMENIHTMLQELYKAITEKVVMENAAMFNALKLESTKIK 111
                 6677888888888888899999999999666566777772245689****9998444222567777777777777888899999999999999999999 PP

       SPT16 122 prLkdly 128
                 ++L+dl 
  KHJ30601.1 112 KELEDLR 118
                 9999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1574  (0.0877907); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1029.66
//
Query:       KHJ30602.1  [L=275]
Description: putative mfs drug transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-09   37.4  18.3    4.2e-07   29.2  16.1    2.1  2  MFS_1         Major Facilitator Superfamily
  ------ inclusion threshold ------
       0.14   12.9   1.4       0.32   11.8   1.4    1.6  1  Cadherin_C_2  Cadherin cytoplasmic C-terminal


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2  16.1   4.7e-11   4.2e-07     203     352 ..       2     151 ..       1     152 [. 0.76
   2 !    8.6   0.0     9e-05       0.8     149     187 ..     219     257 ..     211     274 .. 0.71

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 4.7e-11
       MFS_1 203 llkdpvlwillialllfffgfsg..lltllplylqevlglsglllaglllallalvgailallagrlsdrlgr.rrrlllallllllaalglallavts 298
                 ++k++ +  l +++++f  g+++    +++p++ q  +g++    a+ +l  + lv  +++ l+g ++   gr r  l+++++l ++++ + + l ++s
  KHJ30602.1   2 IFKSRMV--LATTAITFLSGWNFlvQIYFIPSFYQLAFGYT-PTRAASMLLPIILVQTASSTLSGLVVSWRGRyRESLIFGYILWSIGLGLHCSLTPSS 97 
                 5666755..6777777777777755778899999*******.566665555555555555889999999989844555555555555555555555567 PP

       MFS_1 299 savllllvlvliGfglgfvfpsllalasdlappeeagtasglfntagslggalg 352
                 + +  l   +l+Gfg g +f ++l +++  + +e+++ ++g+ + +++lgg +g
  KHJ30602.1  98 NLATQLGYGFLLGFGTGQYFQPSLIAMQAAVTKEHMAVITGVRSYLRCLGGTFG 151
                 77888889999****************************************998 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 9e-05
       MFS_1 149 gWravfyilaivsllafvlfllllpeepperkrkspkee 187
                 g+r vfy+ ++++++++v+ ++++p+ + + +++ +++e
  KHJ30602.1 219 GFRRVFYLSTALGIVSIVVTIFFIPQIELKIEKSQKEKE 257
                 7999************99977777666655555555554 PP

>> Cadherin_C_2  Cadherin cytoplasmic C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.4   3.5e-05      0.32       4      48 ..     224     270 ..     223     275 .] 0.86

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.5e-05
  Cadherin_C_2   4 lYLviaLasvSflFLltvivlvavrlrkerksaalqkkk.s.lvskp 48 
                   +YL  aL++vS++  +++i  + +++ k++k+++l+++  s +vs++
    KHJ30602.1 224 FYLSTALGIVSIVVTIFFIPQIELKIEKSQKEKELESSVsSsVVSIS 270
                   8**********************************996555566555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1996.63
//
Query:       KHJ30603.1  [L=137]
Description: hypothetical protein EV44_g1345 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 960.17
//
Query:       KHJ30604.1  [L=423]
Description: putative rna exonuclease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.036   14.6   0.1       0.45   11.0   0.0    2.6  3  RNase_T         Exonuclease
      0.055   13.2   0.0       0.57    9.9   0.0    2.4  1  DNA_pol_A_exo1  3'-5' exonuclease
        6.7    6.5   7.6        1.5    8.6   0.4    2.2  2  DUF1635         Protein of unknown function (DUF1635)


Domain annotation for each model (and alignments):
>> RNase_T  Exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0         1   6.1e+03      50      91 ..     109     152 ..      99     194 .. 0.56
   2 ?   11.0   0.0   7.6e-05      0.45       1     109 [.     198     306 ..     198     339 .. 0.80
   3 ?    0.0   0.0      0.19   1.1e+03     148     161 ..     390     404 ..     370     407 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1
                 SHHHHHHHHHCHHHHHTCEBHHH..HHHHHHHHHHHHTCCCETT CS
     RNase_T  50 tdecteftgitqemldeapsfke..vleefkellrklallvahn 91 
                 + e+++++  t+ ++++++++ e  +  +f++   k++ +  + 
  KHJ30604.1 109 SQEAVNHSVKTKSEVEKKHETGEpvMRCRFHSGTLKRQHWNCCY 152
                 66777777777777777777777554455555555555554444 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 7.6e-05
                 EEEEEEESSSTTCTTS-EEEEEEEEEETTCCEEEEEEEEEEEHSSHCSSSHHHHHHHHHCHHHHHTCEBHHH.......HHHHHHHHHHHHTCCCETTT CS
     RNase_T   1 vviDlEttgldakekdeiieiaaisidggeneigetfhfyvkptelakltdecteftgitqemldeapsfke.......vleefkellrklallvahna 92 
                 v++D+E+   +     e+i + ai   ++e      ++++v p+ +  + d+ t+++g + ++ ++a  +         + e++ +++++++++v+h a
  KHJ30604.1 198 VALDCEMGRNKY-GETELIRLSAIDYFSSEV----LIDSLVYPDAP--MGDYNTRYSGVSFKQMEDAYRNRLcilgkdaAREALWKFVGPKTIVVGHSA 289
                 789***988887.799999999999999984....5789*******..***************999999876555555588888888999999999888 PP

                 CEEEESSHHHHHHHHHH CS
     RNase_T  93 afdvgflraadkrilkk 109
                 + d++ lr+  ++++  
  KHJ30604.1 290 NNDLSALRWIHELVIDT 306
                 88888888877776543 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.19
                 SSS.TSSHHHHHHHH CS
     RNase_T 148 dgr.aHrAldDaeat 161
                 +gr  H++l+Da+a+
  KHJ30604.1 390 QGRsGHDSLEDATAA 404
                 45577*******986 PP

>> DNA_pol_A_exo1  3'-5' exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   9.5e-05      0.57      37      97 ..     242     301 ..     175     322 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 9.5e-05
                     SSEEEEEEEEECSSEEEEEECTTTTTT-HGHHHHHHHT-TTSEEEESSHHHHHHHHHHHHT CS
  DNA_pol_A_exo1  37 atlvliliqlgekeeayiidplelgddvalealkrlledenitkvghnakfDlevlardfg 97 
                     ++ +   +++++ e+ay    + lg+d a eal +++  ++ ++vgh+a +Dl +l   ++
      KHJ30604.1 242 YNTRYSGVSFKQMEDAYRNRLCILGKDAAREALWKFVG-PKTIVVGHSANNDLSALRWIHE 301
                     3334444455555555555555555555999*****99.888************9987433 PP

>> DUF1635  Protein of unknown function (DUF1635)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   1.7      0.05     3e+02      48     110 ..      54     117 ..      31     144 .. 0.52
   2 ?    8.6   0.4   0.00025       1.5      17      80 ..     312     375 ..     297     407 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.05
     DUF1635  48 ErdeAqeklqkllleklllqqqqqqneesaslsgassiederrasnnsfsssdlee...sivssev 110
                 Er +   ++ +l  +   +  q++  ++++ ++  + + d  + + n +ss + e+     v+ +v
  KHJ30604.1  54 ERKKRCYRCGQLFKKGK-ISTQKESYDSTSKITLQQKMTDL-HLQDNTISSINQEKrsqEAVNHSV 117
                 55555555555554444.33333333455555555555553.224444555444443221122111 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00025
     DUF1635  17 LettklkaqeelrkrdeeviqLkdlLkktikErdeAqeklqkllleklllqqqqqqneesasls 80 
                 Le ++ + + e+ k++ e ++ + +L+++ k  d+  +k  +l+l+++l +++ q+++ s   s
  KHJ30604.1 312 LEYVEEEKRAEINKKKAEAKTAEVILSNVEKTYDKSGDKSGNLVLDNTLREKKSQKSRGSGRFS 375
                 77778888889************************************97666666655444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1736  (0.0968264); expected 358.6 (0.02)
Passed bias filter:                      585  (0.0326287); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3125.71
//
Query:       KHJ30605.1  [L=1062]
Description: putative zinc finger transcription factor 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.1e-29  100.3   0.3    9.1e-29  100.3   0.3    2.5  3  Fungal_trans  Fungal specific transcription factor domain
    2.5e-09   37.1  11.3    4.5e-09   36.3  11.3    1.4  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
      0.029   14.3   0.1        6.5    6.7   0.0    2.4  2  Rieske_2      Rieske-like [2Fe-2S] domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.3   0.3   1.5e-32   9.1e-29       2     263 ..     401     662 ..     400     666 .. 0.88
   2 ?   -1.1   0.1      0.13   7.9e+02     163     207 ..     821     867 ..     817     898 .. 0.75
   3 ?   -2.0   0.2      0.25   1.5e+03     171     204 ..     954     986 ..     952     999 .. 0.72

  Alignments for each domain:
  == domain 1  score: 100.3 bits;  conditional E-value: 1.5e-32
  Fungal_trans   2 drffsnfh.pqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsL 97 
                   ++ff+n+  + +++lhkpsf++         s++ +p l+lai+a+ a+fs  +  ++++ + +    ++a  ++ +i+i    +++ ++++i+ +L
    KHJ30605.1 401 EVFFENIEgQVYHLLHKPSFMERM------RSNSIPPVLVLAICAISARFSTHPIIKKSPYHLRGE--KWAA-VSRSIVI---RRYEYPDVTIVICL 485
                   58******8889************......********************9988887777666644..4433.3445555...78888899****** PP

  Fungal_trans  98 lllelyektssdralherhhgvavrlarslgLhrnpsyvgkks..lwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcddddl 192
                   l+l+l e++++ r+  + + g+a+r+a  l Lh++  +        +kl + ++esr+R+ wa+F +D++ ++  +rpp+++++ inl+LP  +  +
    KHJ30605.1 486 LILSLHESGTCQRERNWSLGGMAIRMALALDLHQDLDHDPMNAdhEKKLGFIDRESRKRIMWACFAMDRLESSGRNRPPFISENIINLQLPIKEK-Y 581
                   *********************************99987664447899999999**************************************9999.8 PP

  Fungal_trans 193 wesddaseetlvetk...........lsneeksrkiasfllaLkkilskiagsllsiekqlqqrdlqseklswveelerald 263
                    ++    + + ++ +           +s+ +++++ + +ll++  i++ ++  ++s  ++  ++ +q   +s ++ l+ +l 
    KHJ30605.1 582 FIQGIPGQTEYLNESigyissskvdeISDTKSNMDVSAYLLRVIAIWGRVSQYVYSSLYPHHESTSQ-GLESLFQSLDQQLA 662
                   8888888888888779*********************************999999999998888888.67777777777765 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.13
  Fungal_trans 163 DktialklGrpp.llddsqinlp.LPcddddlwesddaseetlvetk 207
                   D+ +++k    + +++ +  +l+ L c+d ++ +s+++++ +++e+ 
    KHJ30605.1 821 DTNHSSKEIESSpIMSFQYSDLLdLYCNDTNMFNSSEETADFKKEIT 867
                   55555555555668888888888899999999999999999888855 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.25
  Fungal_trans 171 GrppllddsqinlpLPcddddlwesddaseetlv 204
                    +p+ l+ + ++++LP +d+   + d+  +++l 
    KHJ30605.1 954 HNPSYLFPEFQQVNLPQSDR-TPDFDSFCCVDLE 986
                   4566789999*********9.6666666665555 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3  11.3   7.5e-13   4.5e-09       2      39 ..     241     277 ..     240     278 .. 0.94

  Alignments for each domain:
  == domain 1  score: 36.3 bits;  conditional E-value: 7.5e-13
                 S-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCCCE CS
     Zn_clus   2 aCdnCrkkKvKCdakkPaCsnCkklnleCtfysesskr 39 
                 aC  Cr+kK++C+++kPaC++C ++ ++C+ y+  +++
  KHJ30605.1 241 ACVACRRKKIRCSGEKPACKHCLRSKVPCV-YKVTTRK 277
                 9*****************************.9988876 PP

>> Rieske_2  Rieske-like [2Fe-2S] domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0    0.0011       6.5      18      58 ..      51      91 ..      37      95 .. 0.87
   2 ?    4.8   0.0    0.0045        27      65      93 ..     187     215 ..     175     221 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0011
                EEEETTEEEEEEE-TTS-EEEEESS-TTTSSSTCCCSEEEE CS
    Rieske_2 18 aalvdgkqvalfrlekeevyAidnldpaseanvlsrGlvgd 58
                 a+++++q+ ++   + + + i+n+  +se  vls+  +++
  KHJ30605.1 51 LAVLNDQQINVLNNPQYSNFTINNFHNISEPRVLSEVNINN 91
                57789******************************988876 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0045
                 EE-TTT--EEETTT-BBSS-TTSB-BEE- CS
    Rieske_2  65 vasPlykqkfdLktGecledeevslkvyp 93 
                 +   lyk+k++L+ G  +++++ ++kv +
  KHJ30605.1 187 IRLELYKEKYSLNAGVTIDENNSRVKVKE 215
                 55569**************9999998755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1062 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       789  (0.0440069); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.29s 00:00:01.02 Elapsed: 00:00:00.45
# Mc/sec: 7156.79
//
Query:       KHJ30606.1  [L=117]
Description: hypothetical protein EV44_g1954 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       162  (0.00903564); expected 358.6 (0.02)
Passed bias filter:                      144  (0.00803168); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 866.15
//
Query:       KHJ30607.1  [L=99]
Description: hypothetical protein EV44_g3167 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       309  (0.0172346); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 735.69
//
Query:       KHJ30608.1  [L=142]
Description: putative transducin wd40 repeat-like superfamily protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      8e-12   44.5   0.2    1.4e-11   43.8   0.2    1.4  1  DUF4219          Domain of unknown function (DUF4219)
    3.6e-08   33.2   0.1    5.3e-08   32.6   0.1    1.2  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type


Domain annotation for each model (and alignments):
>> DUF4219  Domain of unknown function (DUF4219)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.8   0.2   1.6e-15   1.4e-11       3      26 ..      14      37 ..      11      38 .. 0.93

  Alignments for each domain:
  == domain 1  score: 43.8 bits;  conditional E-value: 1.6e-15
     DUF4219  3 gtNYatWklrMklyLiaqdLWevV 26
                ++NY +W+++Mk+yLiaqdLW+v+
  KHJ30608.1 14 SSNYQVWAIKMKSYLIAQDLWKVI 37
                49*********************8 PP

>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.1   5.9e-12   5.3e-08       2      83 ..      50     131 ..      49     136 .. 0.96

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 5.9e-12
  Retrotran_gag_2   2 kkkdakalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsa 83 
                      k++++k+++lI+l+ +d++++l++  + a+++W+kL+++y   + + + +  + l+s+ ++  esv ++i+++++ +n Ls+
       KHJ30608.1  50 KSQNSKVISLIILACEDHVIKLLDPDDLAATAWKKLEQQYGHIGFSARHLAFQSLVSTNISSCESVDHFIDQFRTNMNTLSQ 131
                      57899************************************************************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       704  (0.039266); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1098.00
//
Query:       KHJ30609.1  [L=619]
Description: hypothetical protein EV44_g3602 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.9e-10   38.8   0.0    2.6e-09   37.3   0.0    1.8  1  rve              Integrase core domain
    0.00072   19.4   1.0      0.003   17.4   1.0    2.1  1  gag_pre-integrs  GAG-pre-integrase domain
  ------ inclusion threshold ------
       0.11   12.6   4.0       0.84    9.8   4.0    2.3  1  Integrase_H2C2   Integrase zinc binding domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.0   4.4e-13   2.6e-09       7     116 ..     484     586 ..     479     588 .. 0.92

  Alignments for each domain:
  == domain 1  score: 37.3 bits;  conditional E-value: 4.4e-13
         rve   7 lwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpqdn 105
                  + vDv++++      ++ ll+vvd ++r+  a  l++ +++ ++ al  + ++++ g  pe+++ D g+ +ts++f+++  +lgi+ +  ++ ++++ 
  KHJ30609.1 484 SIYVDVMYID------EHPLLHVVDEATRFQAARWLTNFSSSNVWNALGTCWIDSYLGP-PEIINHDAGTNFTSSEFQQYSISLGIETKEIPVESANSM 575
                 5667777777......589**************999999899999999999*****999.*************************************** PP

         rve 106 GkvErfhrtlk 116
                 G+vEr h+ l+
  KHJ30609.1 576 GIVERYHKSLR 586
                 ********987 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   1.0     5e-07     0.003      20      63 ..     411     461 ..     379     462 .. 0.70

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 5e-07
  gag_pre-integrs  20 nkssinlWHrRLGHpsfsrlkkLfkkgllpglkisk.......sevCeaCq 63 
                      ++++++  HrR+GHps +rl ++ ++   p  + ++        ++C+ Cq
       KHJ30609.1 411 TETELRTLHRRFGHPSAQRLVNVLQRLGHPDQDGNHrqildkiVRHCHKCQ 461
                      6789999*************9999743222222211222222455999998 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   4.0   0.00014      0.84       9      55 ..     414     463 ..     409     466 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00014
  Integrase_H2C2   9 ilkeaHdsagHlGiektlerlrrryyWp...gmrkdvkkyvksCetCqrr 55 
                      l+ +H   gH+++++  + l+r  +     + r+   k+v++C++Cqr+
      KHJ30609.1 414 ELRTLHRRFGHPSAQRLVNVLQRLGHPDqdgNHRQILDKIVRHCHKCQRY 463
                     58999***************99999986444689999***********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (619 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       752  (0.0419432); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 4091.48
//
Query:       KHJ30610.1  [L=205]
Description: putative proteasome subunit beta type-3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-39  134.0   0.0    5.2e-39  133.7   0.0    1.0  1  Proteasome  Proteasome subunit


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.7   0.0   2.9e-43   5.2e-39       3     190 .]       8     190 ..       7     190 .. 0.98

  Alignments for each domain:
  == domain 1  score: 133.7 bits;  conditional E-value: 2.9e-43
                 HS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHCTT CS
  Proteasome   3 kGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrsgr 101
                 +G+++v+++gkd+v++a+d r+  ++ ++s++ + Kif     ++++++Gla D+ t+++ +r++ ++yrlr++r+i+++     +a+++++ ++++++
  KHJ30610.1   8 NGGACVAMAGKDCVAIACDLRLGLQALTISNN-FPKIFNY-GDVYLGITGLATDVSTVADLMRMKTNMYRLREERNISPS----TMANLVSSSLYEKRF 100
                 699********************999997777.9*****8.66*************************************....*************** PP

                 TTTSEEEEEEEEE.TTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEEE CS
  Proteasome 102 rpfgvslliagvd.eeggpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeavelavkalkealerdklsgknievavi 190
                 +p  vs ++ag+d ++g+p L+ +d +G+    kd+++ G++s+   + +e ++++dl  e+++e++ +al +a++rd+lsg++++v++i
  KHJ30610.1 101 GPWFVSPVVAGLDpKTGKPLLCGFDSIGCPDFAKDFIVSGTASDQLFGTCEGLWEPDLAPEDLFETISQALLNAVDRDALSGWGAHVYII 190
                 *************999************************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1469.56
//
Query:       KHJ30611.1  [L=481]
Description: putative ubx domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.6e-24   83.9   1.0    3.1e-23   81.8   0.0    2.6  3  TUG-UBL1   TUG ubiquitin-like domain
    2.2e-06   27.8   0.0    1.1e-05   25.6   0.0    2.2  1  UBX        UBX domain
  ------ inclusion threshold ------
      0.025   14.1   0.0        2.2    7.8   0.0    2.4  2  IL6        Interleukin-6/G-CSF/MGF family
      0.035   13.9   0.0      0.084   12.7   0.0    1.7  1  Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like


Domain annotation for each model (and alignments):
>> TUG-UBL1  TUG ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.8   0.0   6.9e-27   3.1e-23       1      65 []       8      71 ..       8      71 .. 0.97
   2 ?   -1.7   0.0      0.79   3.5e+03      46      62 ..      83      99 ..      79     100 .. 0.89
   3 ?   -2.0   0.1      0.95   4.2e+03      19      30 ..     190     201 ..     187     214 .. 0.84

  Alignments for each domain:
  == domain 1  score: 81.8 bits;  conditional E-value: 6.9e-27
    TUG-UBL1  1 itynfrrfkvkvtpnttlndvLeeackkfklddsasytLkhnnkpldlslpfRlsnLpngakLeL 65
                i+++frr+++kvtp+t+l+d+Leeac+kf++ ++  y+Lk++ k ldl ++fR+s+L++g+kLeL
  KHJ30611.1  8 IDTSFRRATIKVTPGTYLTDILEEACRKFNV-QQTLYDLKYKTKSLDLFQTFRQSGLASGSKLEL 71
                7899***************************.677*****************************9 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.79
    TUG-UBL1 46 ldlslpfRlsnLpngak 62
                + l+lp  ++ L+++++
  KHJ30611.1 83 VALDLPAAYASLASNCR 99
                789***********996 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.95
    TUG-UBL1  19 ndvLeeackkfk 30 
                 n++Leea ++ +
  KHJ30611.1 190 NQLLEEAQQHIQ 201
                 899****99975 PP

>> UBX  UBX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   2.4e-09   1.1e-05       5      52 ..     337     384 ..     334     411 .. 0.78

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 2.4e-09
                 SEEEEEEEETTSTEEEEEEESSSBHHHHHHHHHHHCCCCCTSEEEEET CS
         UBX   5 datrlqiRlpdGsrlvrrFkksdtlesvyeyVdsklfekeepFqLlts 52 
                 ++++++iR+pd s++v +F++++t   +y++ +   +e+e+pF+L  +
  KHJ30611.1 337 SEVSIKIRFPDQSTIVSTFSAEETGLNLYQFTTNLIEEEERPFKLTWH 384
                 6899***************************99999999999***755 PP

>> IL6  Interleukin-6/G-CSF/MGF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0   0.00048       2.2     128     174 ..      73     119 ..      62     132 .. 0.85
   2 ?    3.6   0.1    0.0095        43      77      90 ..     172     185 ..     164     253 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00048
                 HHHHHHHHS--------HHHHHHH--S-SS-SSHHHHHHHHHHHHHH CS
         IL6 128 lkqkvknleeittpdPttnasllaklqsqeeWlknttiklilrsled 174
                 l  +   + ++++  P++ asl +  +  e++ ++tti lilr++e 
  KHJ30611.1  73 LASRSSTPVSVALDLPAAYASLASNCRIVEKFSNDTTIWLILRKFES 119
                 566666777899999*****************************985 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.0095
                 SSS--S-S-S---H CS
         IL6  77 qsGfnqeicllkit 90 
                 q Gfn  +cl+k++
  KHJ30611.1 172 QLGFNSGTCLIKLS 185
                 78*********975 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.9e-05     0.084       2      72 .]       4      73 ..       3      73 .. 0.95

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.9e-05
                EEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEEX CS
   Rad60-SLD  2 kiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvvi 72
                ++++ + +  + +ikV p t + +++e+ ++k ++++ +   L ++ + Ld  +t+ + ++  g+ +++v+
  KHJ30611.1  4 NVVVIDTSFRRATIKVTPGTYLTDILEEACRKFNVQQ-TLYDLKYKTKSLDLFQTFRQSGLASGSKLELVL 73
                67888888899**************************.***************************999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       851  (0.047465); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3307.40
//
Query:       KHJ30612.1  [L=793]
Description: putative hect-domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-95  318.8   0.0    5.4e-95  318.4   0.0    1.2  1  HECT      HECT-domain (ubiquitin-transferase)
    5.6e-33  112.7  22.8    2.4e-11   43.5   3.4    4.1  4  WW        WW domain
    3.8e-14   52.8   0.0    1.7e-13   50.7   0.0    2.1  2  C2        C2 domain


Domain annotation for each model (and alignments):
>> HECT  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  318.4   0.0     9e-99   5.4e-95       2     305 ..     490     791 ..     489     793 .] 0.97

  Alignments for each domain:
  == domain 1  score: 318.4 bits;  conditional E-value: 9e-99
                 HHHHHHT-GGGSSEEESSTTSSSEEE-TTHHHHS.....HHHHHHHHHHHHHTT--BSS-B-HHHHHHHTT-.---TCHHHHH-HHHHHHHHHHH..HS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT   2 llskelldpklglfeeesedsgtlypkpssseee.llklfeflGkvlGkaiyeeilldlpfsraflkfllgeekitledleeidpelakslkellsles 99 
                 lls+e+++p + lfe++++d++tl+++p s  +  +l++f+f+G+v+G+ai++++ ld  f  a++k++l+ + ++l+d+e +d ++++sl+++l  ++
  KHJ30612.1 490 LLSHEMFNPFYCLFEYSAHDNYTLQINPHSGINPeHLNYFKFIGRVVGLAIFHRRFLDAFFIGALYKMMLN-KAVSLSDMEGVDADFHRSLQWML--DN 585
                 89**************************98776698899********************************.6**********************..77 PP

                 -GGG...GT-BSEEEEE.TTEEEEEESSTTGGGSB--TTTHHHHHHHHHHHHHTGGGHHHHHHHHHHHHTTS-HHHHTTS-HHHHHHHHBCSSS.--HH CS
                 xxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT 100 nteevedlaLtFtipen.agasatieLipnGanipVtnenkkeYiklyvnyllkksvekqleaflkGfsevipskalklfdaeelellisGedelidve 197
                 + e v  l+ tF+ + + +g+++  +L+p+G++i+Vt++nkkeY++l+v+++++k+v++q++af  Gf+e+ips+++++fd++elelli G +e idve
  KHJ30612.1 586 SIEGV--LEQTFSTEDErFGQTTIEDLKPGGRDIEVTDSNKKEYVELMVKWRIQKRVDEQFQAFITGFHELIPSELVNVFDERELELLIGGIAE-IDVE 681
                 87655..999***99999****9999*******************************************************************9.**** PP

                 HHHHTEEEETT--TTSHHHHHHHHHHHHS-HHHHHHHHHHHHSSSS--TTCGGG-.....B--EEEEE-S..-TTS--EEEGGGTEEEE---SSHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT 198 dlrrnteykggynaesetiewlweilkefspeekrlfLqFvTgssrlPlgGfael.....hpkftierkskedetrLPtahTCfnlLklpdYsskeilk 291
                 d++++t y+g y++++e+i+ +w+ +++++ e+k+++LqF+Tg+sr+P++Gf+ l      ++ftier +  + ++LP++hTCfn+L+lp+Y++ e+l+
  KHJ30612.1 682 DWKKHTDYRG-YTESDEVINFFWQTIRSWDAEQKSRLLQFATGTSRIPVNGFKDLqgsdgPRRFTIERAG--EINNLPKSHTCFNRLDLPPYKTLEMLQ 777
                 ********75.***********************************************999*******88..*************************** PP

                 HHHHHHHHHHH--X CS
                 xxxxxxxxxxxxxx RF
        HECT 292 ekLltAieetegFe 305
                  kL++A+eet gF+
  KHJ30612.1 778 AKLTIAVEETMGFG 791
                 *************8 PP

>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   1.8   2.3e-14   1.4e-10       1      31 []     214     243 ..     214     243 .. 0.98
   2 !   43.5   3.4     4e-15   2.4e-11       1      31 []     314     343 ..     314     343 .. 0.99
   3 !   40.5   0.3   3.4e-14     2e-10       1      31 []     373     402 ..     373     402 .. 0.99
   4 ?   -1.9   0.1      0.65   3.9e+03       3      14 ..     681     691 ..     681     693 .. 0.78

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 2.3e-14
                 X-TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW   1 LPpGWeeqwdpdsGrvYYyNheTgetqWekP 31 
                 LP+GWe + d   Gr+YY++h+T++t+W +P
  KHJ30612.1 214 LPDGWERREDNL-GRTYYVDHNTRTTSWNRP 243
                 8***********.*****************9 PP

  == domain 2  score: 43.5 bits;  conditional E-value: 4e-15
                 X-TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW   1 LPpGWeeqwdpdsGrvYYyNheTgetqWekP 31 
                 LPp We++++p+ Gr+Y+++h+T++t+W++P
  KHJ30612.1 314 LPPRWEQRVTPE-GRPYFVDHNTRTTTWVDP 343
                 8***********.****************99 PP

  == domain 3  score: 40.5 bits;  conditional E-value: 3.4e-14
                 X-TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW   1 LPpGWeeqwdpdsGrvYYyNheTgetqWekP 31 
                 LP+GWe++ + +  rvY+++h+T++t+W++P
  KHJ30612.1 373 LPSGWEMRLTNT-ARVYFVDHNTKTTTWDDP 402
                 8***********.*****************9 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 0.65
                 TTEEEEE-TTTT CS
          WW   3 pGWeeqwdpdsG 14 
                 ++W++++d + G
  KHJ30612.1 681 EDWKKHTDYR-G 691
                 58****9966.5 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.0   2.8e-17   1.7e-13      20      94 ..      11      86 ..       3      94 .. 0.85
   2 ?   -3.4   0.0       2.1   1.3e+04      42      54 ..     311     323 ..     302     327 .. 0.74

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 2.8e-17
                SSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEE..EEEEEEEEGHH.HHTT CS
          C2 20 gssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskdd..fiGkveiplst.llsg 94
                + +dp+++++l+g+q++ T+vi+++l+P Wne+f +  +e  ++ L +++fd+++++k+d  f+G++++++ + l+ +
  KHJ30612.1 11 EFPDPFAVITLSGEQTKTTSVIRKTLSPYWNESFDMRANE--DSILAIQIFDQKKFKKKDqgFLGVINVRIGDvLDLS 86
                469*********************************8888..*************966656*********99953333 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.1
                 SSSSSSEEEEEEE CS
          C2  42 knslnPvWnekft 54 
                   +l P+W++++t
  KHJ30612.1 311 TGELPPRWEQRVT 323
                 56788***99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (793 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 5402.07
//
Query:       KHJ30613.1  [L=1038]
Description: hypothetical protein EV44_g1948 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.057   13.2   3.5          2    8.2   0.8    3.2  2  RRM       Putative RRM domain


Domain annotation for each model (and alignments):
>> RRM  Putative RRM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.8   0.00011         2      24      48 ..     586     610 ..     585     614 .. 0.71
   2 ?    3.8   0.1    0.0026        47       2      17 ..     639     654 ..     638     654 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00011
         RRM  24 vgSPFissPnlpsqyappslansss 48 
                 vgSPFi+sP+ + ++ pp + ++ s
  KHJ30613.1 586 VGSPFIQSPTNKFKSIPPLSTHDNS 610
                 8*****9998776666666655544 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.0026
         RRM   2 PnvPqTPFDlaYgasL 17 
                 ++ P  PFD++Y+ +L
  KHJ30613.1 639 QYNPSRPFDVVYSRPL 654
                 567999******9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1038 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       760  (0.0423894); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.25s 00:00:00.95 Elapsed: 00:00:00.42
# Mc/sec: 7438.79
//
Query:       KHJ30614.1  [L=626]
Description: putative ring finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.3e-05   23.6   6.4    7.5e-05   22.8   6.4    1.4  1  RINGv      RING-variant domain
  ------ inclusion threshold ------
       0.04   14.1   2.1      0.092   12.9   2.1    1.6  1  FANCL_C    FANCL C-terminal domain
      0.052   13.9   6.2      0.094   13.1   6.2    1.4  1  zf-RING_2  Ring finger domain


Domain annotation for each model (and alignments):
>> RINGv  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   6.4   1.3e-08   7.5e-05       1      48 []      26      84 ..      26      84 .. 0.82

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 1.3e-08
                ETTTTEE-SSSS....--B-SS--STCCCSB-HHHHHHHHHH..........TCT-SB-TTT CS
       RINGv  1 CriCleeeeese....plispCkCrGslklvHesClekWlde..........keantqCeiC 48
                C++C++e++++      + +pC C+     +H +Cl +W+++          +++  +C +C
  KHJ30614.1 26 CWVCQQEDTDDTpgndVWRTPCPCSL---TAHDTCLLEWISNeeaprpgdiaRSRLIRCPQC 84
                **********9999999*******98...79**********956665555555555557777 PP

>> FANCL_C  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   2.1   1.5e-05     0.092       5      67 ..      26      90 ..      23      92 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.5e-05
                -SSS--SS-TT-----B--S-TT----B-SGGGHHHHHHHHSSS..-TTT--EEE-TTT-SEEEG CS
     FANCL_C  5 CgiCyayrldsgevpdisCdnekCnkkfHsaCLkeWlrslkesr..qsfdvlfGeCPyCkkkisv 67
                C +C  +  d+    d+      C+++ H +CL eW+ + +  r   +    + +CP C++ i++
  KHJ30614.1 26 CWVCQQEDTDDTPGNDVWRTPCPCSLTAHDTCLLEWISNEEAPRpgDIARSRLIRCPQCRAEIKI 90
                77777766655555556666678**************988777633577778889***9999876 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   6.2   1.6e-05     0.094       2      44 .]      25      85 ..      24      85 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.6e-05
   zf-RING_2  2 eCpIC.leelssads....vl.llpCgHvfhreClerwlrssst.............CPlCr 44
                 C +C +e+ +++      ++  +pC+ + h +Cl +w+ +++              CP Cr
  KHJ30614.1 25 RCWVCqQEDTDDT-PgndvWRtPCPCSLTAHDTCLLEWISNEEAprpgdiarsrlirCPQCR 85
                6999*44444332.235653323479888*********87777788***************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (626 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       559  (0.0311785); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 4741.43
//
Query:       KHJ30615.1  [L=284]
Description: putative glycosyltransferase family 31 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-14   52.5   0.5    7.8e-14   51.7   0.5    1.4  1  DUF604    Protein of unknown function, DUF604
    4.6e-09   36.1   0.1    1.1e-08   34.8   0.1    1.5  1  Fringe    Fringe-like


Domain annotation for each model (and alignments):
>> DUF604  Protein of unknown function, DUF604
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   0.5   8.7e-18   7.8e-14       9      92 ..      58     139 ..      51     165 .. 0.88

  Alignments for each domain:
  == domain 1  score: 51.7 bits;  conditional E-value: 8.7e-18
      DUF604   9 mafGGgGfaiSyplakaLakvldeClerYpklygsddriqaClaelG.vpltkekGfHqvDlrgdllGlLaahplaplvslHHld 92 
                 mafGG+G+ +S p+a+ + k+ d+C +  ++ ++ d  ++ C+  +   +lt+ + +HqvD++gd++Gl  +     ++slHH +
  KHJ30615.1  58 MAFGGAGIFLSLPMAEIIYKNRDSCGQNLRT-TAGDITVMDCIYKFStTKLTNVPALHQVDIHGDVSGLYESG--REILSLHHWK 139
                 9************************998876.677**********97258*******************8765..689*****76 PP

>> Fringe  Fringe-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   0.1   1.2e-12   1.1e-08      85     207 ..       7     115 ..       2     123 .. 0.88

  Alignments for each domain:
  == domain 1  score: 34.8 bits;  conditional E-value: 1.2e-12
      Fringe  85 skkkWfchvDDDnyl.nveaLlklLskynhtqdvylGkpsldrpieaterteenkkkkvkfwfatGGaGfclsralalklaPwasggrfvstsekirlp 182
                 ++++W+  +DDD++  +++ L+++L++y+++++ y+G  s d  + ++              +a GGaG+ ls  +a+ +  ++++ ++ ++ +     
  KHJ30615.1   7 NDTQWITCIDDDTFFpSIHDLQAMLANYDPKKQYYIGSLSEDWWAVKHYG-----------LMAFGGAGIFLSLPMAEII--YKNRDSCGQNLR--TTA 90 
                 6789*********98689*******************9998877766322...........5789**************9..888888888877..778 PP

      Fringe 183 dDctlGfiieelLgvslthsslfHs 207
                  D+t+  +i +    +lt+++++H+
  KHJ30615.1  91 GDITVMDCIYKFSTTKLTNVPALHQ 115
                 9***********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2195.86
//
Query:       KHJ30616.1  [L=260]
Description: putative 50s ribosomal protein l27 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-30  104.8   0.5    1.8e-30  104.8   0.5    1.7  2  Ribosomal_L27  Ribosomal L27 protein
     0.0037   17.5   0.3     0.0068   16.7   0.3    1.4  1  DUF4976        Domain of unknown function (DUF4976)


Domain annotation for each model (and alignments):
>> Ribosomal_L27  Ribosomal L27 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.8   0.5     2e-34   1.8e-30       1      79 []      49     131 ..      49     131 .. 0.95
   2 ?   -4.2   1.7         2   1.8e+04       2      18 ..     240     256 ..     239     258 .. 0.63

  Alignments for each domain:
  == domain 1  score: 104.8 bits;  conditional E-value: 2e-34
  Ribosomal_L27   1 AhkkagGstkngrdskgkrlGvKkfggqlvkagnIivrQrgtkfhpGenvgiGkdhtlfAlvdGvVkfe....kkkkrkyvsv 79 
                    A++ +++s ++++d  gkrlG+Kk+g+++v++gnIi+rQrgt+++pGenvg+G+dht+f++v+G+Vk++    k+ kr+y+ v
     KHJ30616.1  49 ASHNQQSSHHQKKDGPGKRLGAKKSGEEYVIPGNIIFRQRGTHWFPGENVGMGRDHTIFSKVHGYVKYYkdplKHPKRQYIGV 131
                    788999***************************************************************77766999**9986 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 2
  Ribosomal_L27   2 hkkagGstkngrdskgk 18 
                    +k+ag  +k + +sk+k
     KHJ30616.1 240 EKRAGRMKKSKAKSKSK 256
                    56666666666677776 PP

>> DUF4976  Domain of unknown function (DUF4976)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.3   7.6e-07    0.0068      25      99 ..     111     188 ..     101     191 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 7.6e-07
     DUF4976  25 alyYhyyeyPaehavkrhygvrteryklihfykdi...dewelyDlkkDpkelknlyddpeyeevvkelkkkleelrk 99 
                 + y +yy+ P +h  ++++gv  er  ++ +  ++      ++   k D kel+ l++ ++++e++++lk++ +++++
  KHJ30616.1 111 HGYVKYYKDPLKHPKRQYIGVALERDHVLPYNPTMprhRRLNMVTEKMDEKELQILIGPEKTHEIQRKLKSNCRKTNQ 188
                 5699***************************8765111567899999***********************99888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1026  (0.0572257); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1888.98
//
Query:       KHJ30617.1  [L=502]
Description: putative bzip transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-06   28.2   8.3    3.1e-06   27.1   8.3    1.5  1  Hap4_Hap_bind    Minimal binding motif of Hap4 for binding to
    0.00026   21.0  19.2     0.0028   17.7  19.0    2.3  2  bZIP_1           bZIP transcription factor
    0.00094   18.2   1.6     0.0013   17.7   1.6    1.1  1  DUF812           Protein of unknown function (DUF812)
     0.0021   18.5   3.6     0.0045   17.4   3.6    1.6  1  DUF4140          N-terminal domain of unknown function (DUF41
     0.0036   17.9   5.2     0.0072   16.9   5.2    1.5  1  HIP1_clath_bdg   Clathrin-binding domain of Huntingtin-intera
     0.0079   16.4   6.5     0.0079   16.4   6.5    1.7  1  IFT20            Intraflagellar transport complex B, subunit 
     0.0094   15.9   5.5      0.017   15.1   5.5    1.3  1  Prefoldin_2      Prefoldin subunit
  ------ inclusion threshold ------
       0.01   15.2   2.2      0.015   14.6   2.2    1.2  1  MPS2             Monopolar spindle protein 2
      0.014   14.8   2.7      0.021   14.3   2.7    1.2  1  DUF4618          Domain of unknown function (DUF4618)
       0.11   12.4   7.3       0.19   11.6   7.3    1.4  1  Ax_dynein_light  Axonemal dynein light chain
       0.12   12.2   1.3       0.22   11.4   1.3    1.3  1  ACCA             Acetyl co-enzyme A carboxylase carboxyltrans
       0.13   11.7   8.0       0.21   11.0   8.0    1.3  1  Golgin_A5        Golgin subfamily A member 5
       0.21   10.9   2.2       0.36   10.2   2.2    1.3  1  Phlebovirus_NSM  Phlebovirus nonstructural protein NS-M
       0.23   10.3   2.9       0.32    9.8   2.9    1.2  1  Fmp27_WPPW       RNA pol II promoter Fmp27 protein domain
       0.23   11.8  12.4       0.47   10.9  12.4    1.5  1  DUF4200          Domain of unknown function (DUF4200)
       0.26   11.6   9.6       0.49   10.7   9.6    1.4  1  DUF4164          Domain of unknown function (DUF4164)
       0.29   10.9   5.2       0.62    9.9   5.2    1.6  1  DivIC            Septum formation initiator
       0.32   12.1   2.4       0.75   10.9   2.4    1.6  1  DUF5320          Family of unknown function (DUF5320)
       0.34   11.0   6.7        0.1   12.7   1.8    2.3  2  DUF1192          Protein of unknown function (DUF1192)
       0.44   10.2   6.0       0.81    9.3   6.0    1.3  1  GrpE             GrpE
        0.6   10.2   2.0        1.1    9.4   2.0    1.4  1  MCU              Mitochondrial calcium uniporter
          2    7.7   4.8        3.3    7.0   4.8    1.3  1  DUF4407          Domain of unknown function (DUF4407)
        2.2    8.4  12.9        4.2    7.5   6.3    2.4  2  HR1              Hr1 repeat
        2.6    8.6  12.7         13    6.3  12.7    2.1  1  bZIP_Maf         bZIP Maf transcription factor
        3.1    8.0  23.4        6.8    6.9  19.9    2.5  2  bZIP_2           Basic region leucine zipper


Domain annotation for each model (and alignments):
>> Hap4_Hap_bind  Minimal binding motif of Hap4 for binding to Hap2/3/5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   8.3   4.3e-09   3.1e-06       3      17 .]      52      66 ..      51      66 .. 0.98

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 4.3e-09
  Hap4_Hap_bind  3 KnWVLPPRpKPGRKP 17
                   K+WV+PPRpKPGRKP
     KHJ30617.1 52 KEWVIPPRPKPGRKP 66
                   99************9 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7  19.0   3.9e-06    0.0028       7      60 ..      73     130 ..      72     134 .. 0.82
   2 ?    5.3   4.7      0.03        21      25      60 ..     109     144 ..     108     148 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 3.9e-06
                 XXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHH CS
      bZIP_1   7 ekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNks....LkseleelkkevekLk 60 
                 +krk++NR a+r++R+R+ a++ eLe + ++ ++e ++    L++++e+l+ e e L 
  KHJ30617.1  73 TKRKAQNRAAQRAFRERRAARVGELEVQLEEVKEEQQQrekeLRNKIEQLEAELERLN 130
                 69*******************************9976322227777788877777776 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.03
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  25 qaeieeLerrvkaLekeNksLkseleelkkevekLk 60 
                 q++ +eL ++ ++Le+e + L  el++ +  +++L 
  KHJ30617.1 109 QQREKELRNKIEQLEAELERLNAELNSWRLRCNNLN 144
                 778899*******************99988888775 PP

>> DUF812  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   1.6   1.8e-06    0.0013     296     383 ..      73     163 ..      45     180 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.8e-06
      DUF812 296 tkgsrfthaeklqftkeela...kkaeteeelkkkreeeleelqeqieeleskieeleeeikklessikqveeeleeekeeneelekevkl 383
                 tk++  ++a +  f + ++a   + + + ee+k+++++  +el+++ie+le+++e+l++e+++++ +++ ++   e ek+ +e + +e++ 
  KHJ30617.1  73 TKRKAQNRAAQRAFRERRAArvgELEVQLEEVKEEQQQREKELRNKIEQLEAELERLNAELNSWRLRCNNLNTIFEYEKRAKEATYAELAY 163
                 555555555555665553345554556777888777777799******************************9999999988887777665 PP

>> DUF4140  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   3.6   6.3e-06    0.0045      45      95 ..      90     140 ..      84     143 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 6.3e-06
     DUF4140  45 gaatildvqvervpnreaeeeelkalraeleeledelaaledelaaaearl 95 
                  aa++ +++v+ ++ +e+++++ k+lr+++e+le+el++l++el++ + r 
  KHJ30617.1  90 RAARVGELEVQLEEVKEEQQQREKELRNKIEQLEAELERLNAELNSWRLRC 140
                 5689999999999999999999**********************9988775 PP

>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   5.2     1e-05    0.0072      29      72 ..      94     137 ..      69     167 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1e-05
  HIP1_clath_bdg  29 kkeleeelerlkeeaerkleeqkeelekLkreleakraelarlk 72 
                       ele +le++kee++++++e + ++e+L++ele+ +ael++ +
      KHJ30617.1  94 VGELEVQLEEVKEEQQQREKELRNKIEQLEAELERLNAELNSWR 137
                     35899999999999999999999999999999999888887655 PP

>> IFT20  Intraflagellar transport complex B, subunit 20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   6.5   1.1e-05    0.0079      68     106 ..      99     137 ..      77     148 .. 0.90

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.1e-05
       IFT20  68 nllkseakqreaeqqqlqaliaekkaeleRlrvelesLq 106
                  +l+++++++++ +++l ++i++ +aeleRl++el+s++
  KHJ30617.1  99 VQLEEVKEEQQQREKELRNKIEQLEAELERLNAELNSWR 137
                 5899********************************997 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   5.5   2.4e-05     0.017      57      96 ..      98     137 ..      94     144 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.4e-05
                  EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2  57 kqdkeevkeeLeerketlekeiktlekqleklekeleelk 96 
                  ++ +eevkee ++r+++l  +i++le +le+l++el+ ++
   KHJ30617.1  98 EVQLEEVKEEQQQREKELRNKIEQLEAELERLNAELNSWR 137
                  67899*******************************9987 PP

>> MPS2  Monopolar spindle protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   2.2   2.1e-05     0.015     124     216 ..      62     155 ..      24     163 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.1e-05
        MPS2 124 knsekdslstprkkilldllkkqesPeklrrsnrklkaLevrveslkdELeakdevlrek....eRelleLkkrlseykekYellqrefslykarrv 216
                 ++ ++++ + p+k+   + +++ ++ +   r+  ++  Lev++e++k+E +++++ lr+k    e el  L+  l+ ++ + + l+  f++ k  ++
  KHJ30617.1  62 PGRKPATDTPPTKR---KAQNRAAQRAFRERRAARVGELEVQLEEVKEEQQQREKELRNKieqlEAELERLNAELNSWRLRCNNLNTIFEYEKRAKE 155
                 45566666667776...66666667777778899999*******************99986555778889999999999999999999997776655 PP

>> DUF4618  Domain of unknown function (DUF4618)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   2.7   2.9e-05     0.021      62     111 ..      98     147 ..      81     163 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.9e-05
     DUF4618  62 kkqleqakaeLqeweekeekklekLeqqleqlnakvqklqeelnvLstYk 111
                 + qle++k+e q+ e+++ +k+e+Le +le+lna++++ +   n L+t  
  KHJ30617.1  98 EVQLEEVKEEQQQREKELRNKIEQLEAELERLNAELNSWRLRCNNLNTIF 147
                 56899999999999999999999999999999999998887777777655 PP

>> Ax_dynein_light  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   7.3   0.00027      0.19     116     173 ..     107     163 ..      76     170 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00027
  Ax_dynein_light 116 qaeqgkselekkikeLeeekeelekqvaelkaklealekrekerrqeeekkheeeief 173
                      +++q+++el++ki++Le+e e+l+ ++++++ ++++l+  ++ +++++e  ++e +++
       KHJ30617.1 107 EQQQREKELRNKIEQLEAELERLNAELNSWRLRCNNLNTIFEYEKRAKEATYAE-LAY 163
                      4568999**********************************9999999987764.555 PP

>> ACCA  Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.3    0.0003      0.22       7      49 ..      93     135 ..      89     176 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0003
        ACCA   7 piaeleekieelkklaeesevdlseeieklekkleklkkeiyk 49 
                 ++ ele ++ee+k+ ++++e +l+++ie+le++le+l++e+ +
  KHJ30617.1  93 RVGELEVQLEEVKEEQQQREKELRNKIEQLEAELERLNAELNS 135
                 6789*********************************999875 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   8.0    0.0003      0.21     101     174 ..      79     155 ..      72     164 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0003
   Golgin_A5 101 qleeerkakeeveaelerlkeelryleeelvrskatlqsrikdrekeieklrnqlttk...slsssseselesRlkq 174
                 + +++r+ +e+  a + +l+ +l+ ++ee+++  ++l+++i++ e+e+e+l+++l +     ++  +  e e+R k+
  KHJ30617.1  79 NRAAQRAFRERRAARVGELEVQLEEVKEEQQQREKELRNKIEQLEAELERLNAELNSWrlrCNNLNTIFEYEKRAKE 155
                 45568888888899999999********************************9998752212333345567777665 PP

>> Phlebovirus_NSM  Phlebovirus nonstructural protein NS-M
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.2    0.0005      0.36     192     246 ..      93     147 ..      75     162 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.0005
  Phlebovirus_NSM 192 krgqekrdakklveesmArvkdlkeelkiltdelsqikseiqilrkkikdfetvv 246
                      + g+   + +++ ee + r k+l+++  +l  el+++ +e+++ r +  + +t+ 
       KHJ30617.1  93 RVGELEVQLEEVKEEQQQREKELRNKIEQLEAELERLNAELNSWRLRCNNLNTIF 147
                      5567777889999**********************************99999986 PP

>> Fmp27_WPPW  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.9   0.00045      0.32     178     241 ..      92     155 ..      74     226 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00045
  Fmp27_WPPW 178 eRleeleeqiekleekleelelksekedeelkeeieelekeikelkeklefletlledlkesee 241
                  R+ ele q+e+++e+ ++ e++ +++ e+l++e+e+l+ e+++ + + + l+t+ e  k+ +e
  KHJ30617.1  92 ARVGELEVQLEEVKEEQQQREKELRNKIEQLEAELERLNAELNSWRLRCNNLNTIFEYEKRAKE 155
                 3444455555555555544444444444555555555555555555555555555443333333 PP

>> DUF4200  Domain of unknown function (DUF4200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9  12.4   0.00065      0.47      21      87 ..     100     166 ..      74     176 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00065
     DUF4200  21 eiqrleealkqreeelekkeqeleedllkfdkflkendakraralkkaeeerklkkekeaeikklka 87 
                 ++++ +e+++qre+el++k ++le +l++++  l++   + ++ +   e e+++k+   ae++ l++
  KHJ30617.1 100 QLEEVKEEQQQREKELRNKIEQLEAELERLNAELNSWRLRCNNLNTIFEYEKRAKEATYAELAYLRN 166
                 667889****************************************************999988875 PP

>> DUF4164  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   9.6   0.00069      0.49      10      67 ..      87     145 ..      78     153 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00069
     DUF4164  10 ltrLeaaldsLEkavdrrleaerkr.deleaeiealgedrsRLaeeLdqaearaarlee 67 
                  +r  a + +LE  +++  e++++r +el+++ie+l+++ +RL +eL + + r+++l+ 
  KHJ30617.1  87 RERRAARVGELEVQLEEVKEEQQQReKELRNKIEQLEAELERLNAELNSWRLRCNNLNT 145
                 556667788999999986666666659*****************************986 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   5.2   0.00086      0.62      23      51 ..     102     130 ..      89     159 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00086
                 HHHHHHHHHHHHHHHHHHHHHHHHHCC-X CS
       DivIC  23 kqeiaalqaelaklkaeneeLeaevkdLk 51 
                 ++  +++q+  ++l++++e+Leae+++L+
  KHJ30617.1 102 EEVKEEQQQREKELRNKIEQLEAELERLN 130
                 55556666666666666666666666662 PP

>> DUF5320  Family of unknown function (DUF5320)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.4    0.0011      0.75      42      98 ..      78     135 ..      61     136 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.0011
     DUF5320  42 ggrglgrgfgrrrraggarla.aaetaeaskeeekelLeeqaeaLeeeleaikkrlke 98 
                 ++r  +r f+ rr a + +l  + e  +++++++++ L++++e Le+ele ++++l++
  KHJ30617.1  78 QNRAAQRAFRERRAARVGELEvQLEEVKEEQQQREKELRNKIEQLEAELERLNAELNS 135
                 4788899999977777666667667777777778888*****************9985 PP

>> DUF1192  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.2       1.6   1.1e+03      44      58 .]      73      87 ..      70      87 .. 0.87
   2 ?   12.7   1.8   0.00014       0.1      23      44 ..     113     134 ..     112     137 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.6
     DUF1192 44 akkkasraAAealFk 58
                +k+ka++ AA+  F+
  KHJ30617.1 73 TKRKAQNRAAQRAFR 87
                588999999999997 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00014
     DUF1192  23 eELeerIalLeaEIaRleaaia 44 
                 +EL++ I++LeaE +Rl a++ 
  KHJ30617.1 113 KELRNKIEQLEAELERLNAELN 134
                 69*****************986 PP

>> GrpE  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   6.0    0.0011      0.81       9      51 ..     100     142 ..      91     168 .. 0.56

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0011
                 TTHHHHCCCCCCTTCHHHCTTSCCCCCCTTTTTTTTHHHHHHH CS
        GrpE   9 eeedeeeeleeeleelekevkelkekllrllaefenlrkrtek 51 
                 ++e+ +ee++++ +el++++++l+ +l+rl+ae+   r r ++
  KHJ30617.1 100 QLEEVKEEQQQREKELRNKIEQLEAELERLNAELNSWRLRCNN 142
                 4555555555556666666666666666666666644444332 PP

>> MCU  Mitochondrial calcium uniporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   2.0    0.0015       1.1      45      85 ..     100     141 ..      67     149 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0015
                 SS.SSSSTSSSSSHHHHHHHHHHHHH-SHHHHHHHHTCCCGG CS
         MCU  45 al.nveeeqlkkereleekleelreelepleekkeeidekAe 85 
                  l +v+eeq+++e+el++k+e+l++ele l+++ ++ + +++
  KHJ30617.1 100 QLeEVKEEQQQREKELRNKIEQLEAELERLNAELNSWRLRCN 141
                 3357899***********************998887776666 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.8    0.0046       3.3     115     153 ..      99     137 ..      60     192 .. 0.56

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0046
     DUF4407 115 eqqeeakelkeqlaaaltaelaeleaqiaalqaeidaae 153
                  q ee+ke ++q +++l++++++lea++++l+ae+++ +
  KHJ30617.1  99 VQLEEVKEEQQQREKELRNKIEQLEAELERLNAELNSWR 137
                 233333333333333344444444444444444444433 PP

>> HR1  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   3.8     0.076        54      31      67 ..      73     110 ..      66     112 .. 0.80
   2 ?    7.5   6.3    0.0059       4.2      36      65 ..     104     132 ..     103     135 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.076
         HR1  31 tqnkkvrqeaeselsesns.kielLreqLeelqasvqn 67 
                 t+ k + ++a+   +e +  ++ +L+ qLee++ ++q+
  KHJ30617.1  73 TKRKAQNRAAQRAFRERRAaRVGELEVQLEEVKEEQQQ 110
                 56666778888888888889**************8876 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0059
         HR1  36 vrqeaeselsesnskielLreqLeelqasv 65 
                 v++e +++ +e ++kie+L+ +Le+l+a +
  KHJ30617.1 104 VKEEQQQREKELRNKIEQLEAELERLNA-E 132
                 6778899999*****************9.4 PP

>> bZIP_Maf  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  12.7     0.019        13      33      88 ..      74     129 ..      72     144 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.019
    bZIP_Maf  33 RRrlKNrgyakscrkrrlqqkeelekekeeleeelerlqqelsrlrqekdalkrkn 88 
                  R+ +Nr +++  r+rr  +  ele + ee +ee+++ ++el    ++++a +++ 
  KHJ30617.1  74 KRKAQNRAAQRAFRERRAARVGELEVQLEEVKEEQQQREKELRNKIEQLEAELERL 129
                 6999*****************99999999999999999999988888887766654 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  19.9    0.0095       6.8       8      54 .]      74     125 ..      69     125 .. 0.92
   2 ?    4.6   8.8     0.047        34      27      54 .]     105     132 ..     104     132 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0095
                 XXX.XXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHH....HHHHHHHHHHH CS
      bZIP_2   8 rRr.kNreAarrsRekkkakeeeleervkeLeeeNaq....LrqkveqLeke 54 
                 +R+ +Nr+A r +Re++ a+  ele +++e++ee +q    Lr+k+eqLe+e
  KHJ30617.1  74 KRKaQNRAAQRAFRERRAARVGELEVQLEEVKEEQQQrekeLRNKIEQLEAE 125
                 8999******************************99866668********98 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.047
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2  27 eeeleervkeLeeeNaqLrqkveqLeke 54 
                 +ee ++r keL+++++qL++++e L++e
  KHJ30617.1 105 KEEQQQREKELRNKIEQLEAELERLNAE 132
                 58999999****************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2118  (0.118133); expected 358.6 (0.02)
Passed bias filter:                     1057  (0.0589548); expected 358.6 (0.02)
Passed Vit filter:                       230  (0.0128284); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.75u 0.33s 00:00:01.08 Elapsed: 00:00:00.44
# Mc/sec: 3418.96
//
Query:       KHJ30618.1  [L=260]
Description: putative 50s ribosomal protein l1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.7e-26   92.6   0.5    3.2e-26   92.3   0.5    1.1  1  Ribosomal_L1  Ribosomal protein L1p/L10e family


Domain annotation for each model (and alignments):
>> Ribosomal_L1  Ribosomal protein L1p/L10e family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.3   0.5   1.8e-30   3.2e-26       7     204 .]      44     232 ..       5     232 .. 0.87

  Alignments for each domain:
  == domain 1  score: 92.3 bits;  conditional E-value: 1.8e-30
                   SSS--EEEEEEEESSS-TTSGGG--EEEEE-STSTSSCS-EEEEE-HHHHH...HHHHTT..-SEEETCHHHHHHT-HHHHHHTCCH-SEEEEEGGG CS
  Ribosomal_L1   7 kkfdesveialnlttkkpkkadqrkpgkipLphplgkevkiclitkdpqaeyakeakeagriakviglkklkkkyksfeakrkllkefdlfladdri 103
                    ++  sv++ l + ++k  k+    + ++ Lphp++++++i +i+  +++  a+ea++ag  a  +g + + + +      +++  efd ++++ + 
    KHJ30618.1  44 GQKPTSVKYELAV-KLKSLKNGPVLRNRLRLPHPIKTDTRISVICPPDSKY-ASEARDAG--AVLVGEDSIFEAV------KEGKIEFDRCICQLES 130
                   3444558888888.6666777889*********************987666.99******..*******999999......89************** PP

                   HHHHHH.HCHHHHGGGT-S-ECC..CT.BTS-HHHHHHHHCTTEEEEE-TTTSEEEEEEEETTSSHHHHHHHHHHHHHHHHHTSTTT....SGSEEE CS
  Ribosomal_L1 104 mpllpk.lLGkvfgkrkkmPipvltkgtvkedvkkevekalkstvvvrldkgtclsvkvGklsftaeelaeNieavvkalvekvpkk....wkniks 195
                   +++l k  LG+v+g++++mP ++   gtv ++ ++ ++++++ +v++r +k +++ +++G+l +++ el  Ni+a+++a++ ++ +      k i +
    KHJ30618.1 131 LEKLNKaQLGRVLGPKGLMPSAK--MGTVVKNPAELIREMIG-AVEYR-EKLGVVRLAIGQLAHSPLELQNNIKAIMTAIKYDMAQIaekvNKTIAE 223
                   *****978***************..99*9999**********.*****.*******************************9995544555899**** PP

                   EEEEETTS- CS
  Ribosomal_L1 196 iylkttmsp 204
                   ++l++t++p
    KHJ30618.1 224 VVLSSTNGP 232
                   *******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       812  (0.0452898); expected 358.6 (0.02)
Passed bias filter:                      667  (0.0372023); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2126.45
//
Query:       KHJ30619.1  [L=157]
Description: putative ornithine decarboxylase antizyme [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-35  119.8   0.1    7.5e-35  119.3   0.1    1.1  1  ODC_AZ    Ornithine decarboxylase antizyme
  ------ inclusion threshold ------
      0.093   12.9   0.0       0.14   12.3   0.0    1.3  1  DUF1823   Domain of unknown function (DUF1823)


Domain annotation for each model (and alignments):
>> ODC_AZ  Ornithine decarboxylase antizyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.3   0.1   8.4e-39   7.5e-35       3     114 .]      45     157 .]      43     157 .] 0.94

  Alignments for each domain:
  == domain 1  score: 119.3 bits;  conditional E-value: 8.4e-39
      ODC_AZ   3 awlEvwdyvggasfrgfvaekvqertlfvfldksvlsedlkegLvaLlelAeeklecehlvicldrse.eeelkdllraLqwvGfelvtldawavneel 100
                 a++E+wdyvgg+sfrgfv  +++++ lf+f++ks++++dlk+gL+aL+++Ae  +++ ++ +cldrs  e+e+k ll++L+wvGf++vtl++   + ++
  KHJ30619.1  45 AYFEMWDYVGGSSFRGFVGGHGNKQGLFIFFEKSIIHKDLKRGLMALIDFAEVVFDVAQITMCLDRSIpENETKFLLKSLSWVGFKPVTLESRINEIQT 143
                 689*****************************************************************8888999*****************9975566 PP

      ODC_AZ 101 dvtsekwlfmsmel 114
                 +  s+kw+f++me+
  KHJ30619.1 144 SDISSKWFFLGMEM 157
                 667888******96 PP

>> DUF1823  Domain of unknown function (DUF1823)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.6e-05      0.14      60      95 ..     100     135 ..      83     145 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.6e-05
                 T--HHHHHHHHTS-GGGTTHHHHTT------GGG-- CS
     DUF1823  60 esrpatvkltRsipkenkqllkeklgfkGykidelt 95 
                 ++ + t+ l Rsip+++ + l ++l + G+k   l+
  KHJ30619.1 100 DVAQITMCLDRSIPENETKFLLKSLSWVGFKPVTLE 135
                 555778999*********************976665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       313  (0.0174578); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1210.09
//
Query:       KHJ30620.1  [L=307]
Description: hypothetical protein EV44_g4244 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       541  (0.0301746); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2216.64
//
Query:       KHJ30621.1  [L=728]
Description: putative dna repair protein rad26 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-43  148.4   0.1    2.7e-43  147.4   0.1    1.6  1  DUF3636    Protein of unknown function (DUF3636)
  ------ inclusion threshold ------
        1.4    8.5   3.6        3.3    7.3   3.6    1.7  1  NDUF_B5    NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subuni


Domain annotation for each model (and alignments):
>> DUF3636  Protein of unknown function (DUF3636)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.4   0.1     3e-47   2.7e-43       2     148 .]     481     626 ..     480     626 .. 0.98

  Alignments for each domain:
  == domain 1  score: 147.4 bits;  conditional E-value: 3e-47
                 HHHHHHHHHHHHHHHS-----HHHHHHSS-HHHHHHHTSTTS-HHHHHHHHHHGGGG--SS-SS----HHHHHHHHHHHHHHHHHHHHHS--T....TS CS
     DUF3636   2 vtecLelLylaAlgclssseaierFWrlieldfvllmLskkqplediilmLelLstSvlpdsfGpisseeedqkavekaiidrvsnlLteepradegea 100
                  ++c++lLyl++lgc+ +s+ i+rFWrl+++dfvl+mLs++q   d+ l L l+stS+l++sfG+++   e+q+ +  +iidr+++ L e+p ++ + +
  KHJ30621.1 481 LSACISLLYLVSLGCMNDSQYITRFWRLMRWDFVLVMLSTNQLKFDYDLALCLISTSALRHSFGALPG-GEKQHLQTGWIIDRLTYPLNEHPCKPLSSE 578
                 679*****************************************************************.99**************************** PP

                 -TTSHHHHHHHHHHHHHHHHHHHSHHHHHHHHH-SSHHHHHHHHHHHH CS
     DUF3636 101 kvteaeilelrleaLrvLtafarspfgslalashdsaigRlvrvLsde 148
                 k + +++ ++rl +L++L+ +++sp+ s+ala+h++aigRl+ +++de
  KHJ30621.1 579 KFEIKHLNQVRLSILQLLIRISKSPYTSKALATHPHAIGRLICLINDE 626
                 ********************************************9986 PP

>> NDUF_B5  NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   3.6   0.00037       3.3     119     162 ..     174     218 ..     171     245 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00037
     NDUF_B5 119 iarylydspekdYekmlallqv.Eaekaelrllekevrrkmrerg 162
                 i+r+  ++  kdYe++l+ +q+  aek e +++e+e+ r   ++ 
  KHJ30621.1 174 IVRNKQEKIVKDYEQQLHQIQKlNAEKLEQQQKELEIARESEKKA 218
                 6788888999**********86489*************9987775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (728 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1711  (0.095432); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.27s 00:00:01.01 Elapsed: 00:00:00.45
# Mc/sec: 4875.00
//
Query:       KHJ30622.1  [L=447]
Description: putative phosphatidate cytidylyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-81  274.0  24.0      2e-81  273.7  24.0    1.1  1  CTP_transf_1  Cytidylyltransferase family


Domain annotation for each model (and alignments):
>> CTP_transf_1  Cytidylyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  273.7  24.0   1.1e-85     2e-81       2     266 .]      65     391 ..      64     391 .. 0.99

  Alignments for each domain:
  == domain 1  score: 273.7 bits;  conditional E-value: 1.1e-85
                   HHHHHHHHHHHHHHHTTTSH.HHHHHHHHHHHHHHHHHHHHTT--SHHHHHHHHH....HHHHHHHHHHTTTSSSHHHHHHHHHHHHHHHHHH---. CS
  CTP_transf_1   2 qRvitalvlilivliilllgglvflllvavvvilalkElirlvrlkkrekrllll.llslvlllllllflylesliallklvlllvlvllllvlkvl 97 
                   +R i+++v+i+++ ++++lg+++++++v++++i+ +kE+i+++++ +r++rl ++ +l++++l ++++fly+es++ ++k+++l+++vll +++   
    KHJ30622.1  65 TRSIWTFVMIGLFCCAIFLGHIYIIAIVTAIQIVSFKEVIAIANVPSRARRLRFTkALNWYWLATTMYFLYGESVVYYFKHIVLVDKVLLPFAT--- 158
                   79***************************************************************************************99988... PP

                   ..HHHHHHHHHHHHHHHHHTHHHH............................TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH---B-S-TT CS
  CTP_transf_1  98 kskskklervilallallyvvlll...........................qslllienikeglllvllllalvvaaDigaYffGklfGktkllpki 167
                         ++r+i+++l+++++v+++                           q++++++ni+eg+++++l+++lvv++D++aY++G++fG+t  l+ki
    KHJ30622.1 159 ------HHRFICFTLYVIGFVFFVaslqagnyrfqftqfawthmalylivvQAHFIMNNIFEGMIWFFLPVSLVVCNDTFAYICGITFGRT-QLIKI 248
                   ......8************************************************************************************.***** PP

                   S---BHHHHHHHHHHHHHHHHHHHHHHHCTS............................................---TTSHHHHHHHHHHHHHHHH CS
  CTP_transf_1 168 SPkKTveGfigGlvaavvvglllalvlskal............................................alsllhllllslllslvavfGD 220
                   SPkKTveGf+g++++++++g+ +++vl++++                                            ++++ h+l++++++sl+a+fG+
    KHJ30622.1 249 SPKKTVEGFVGAWIFTIIFGVGMTNVLMRYKyflcpvndlganmwsglqctlnpvflprtihlptwfpyaksfqfSPIQAHVLAFGTFASLIAPFGG 345
                   *****************************99****************************************************************** PP

                   HHHHHHHHHHT-SSS-S-SSSSS-HHHHHHHHHHHHHHHHHHHHHH CS
  CTP_transf_1 221 LveSglKRafgiKDsGkliPGhGGilDRlDsllfaapvvylllelf 266
                   +++SglKR+f+iKD+G++iPGhGGi+DR+D++++++ ++y+++++f
    KHJ30622.1 346 FFASGLKRTFKIKDFGDSIPGHGGITDRIDCQFIMGLFAYMYYHSF 391
                   *******************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       728  (0.0406046); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 3231.13
//
Query:       KHJ30623.1  [L=67]
Description: hypothetical protein EV44_g2004 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.12   13.1   0.1       0.15   12.7   0.1    1.1  1  Ribosomal_S20p  Ribosomal protein S20


Domain annotation for each model (and alignments):
>> Ribosomal_S20p  Ribosomal protein S20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   8.3e-06      0.15      26      64 ..       4      44 ..       1      45 [. 0.88

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 8.3e-06
                    HHHHHHHHHHHHHHC..-HHHHHHHHHHHHHHHHHHHCTTS CS
  Ribosomal_S20p 26 avrtaiKkvraaiea..dkekaqealkkaiskidkaakkgv 64
                    +v t+iKk+++ +    +k++++e+l k++ k+  ++k ++
      KHJ30623.1  4 NVTTFIKKLENSLIGchSKTAVKENLMKIVPKLSEICKSQI 44
                    688**********66799***************99998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.42
# Mc/sec: 480.35
//
Query:       KHJ30624.1  [L=149]
Description: putative ubiquitin-conjugating enzyme e2-16 kda [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-51  172.6   0.0    3.8e-51  172.4   0.0    1.0  1  UQ_con     Ubiquitin-conjugating enzyme
     0.0065   16.2   0.0     0.0081   15.9   0.0    1.1  1  Prok-E2_B  Prokaryotic E2 family B
  ------ inclusion threshold ------
      0.027   14.7   0.0      0.031   14.6   0.0    1.2  1  RWD        RWD domain
      0.036   13.9   0.0      0.056   13.3   0.0    1.3  1  UEV        UEV domain


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.4   0.0   8.6e-55   3.8e-51       1     139 [.       5     143 ..       5     144 .. 0.98

  Alignments for each domain:
  == domain 1  score: 172.4 bits;  conditional E-value: 8.6e-55
                 HHHHHHHHHHHSTTTTEEEEEEET.TEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGGGSTTT--TTSHHH CS
      UQ_con   1 rlqkelkelakkkpsgisaklvdd.enlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldiLkeekWspaltle 98 
                 r++kel +l +++ps++sa++  d  +lf+w+++i+gp+d+pY ggvF l ++fp+dYP+kpPkv+f+t+i+HPn++++G++cldiL+++ Wspalt++
  KHJ30624.1   5 RINKELIDLGRDPPSSCSAGPCGDgGDLFHWNATIMGPSDSPYSGGVFFLAIHFPTDYPFKPPKVNFNTRIYHPNINSNGSICLDILRDQ-WSPALTIS 102
                 789*******************9779**************************************************************77.******** PP

                 HHHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHHH CS
      UQ_con  99 svllsiqsLlaepnpesplnkeaakllkkdreeykkkvkey 139
                 +vllsi+s+l++pnp++pl  e+a+ +k+dr++y+++++e+
  KHJ30624.1 103 KVLLSICSMLTDPNPDDPLVPEIAHVYKTDRSRYEATAREW 143
                 *************************************9986 PP

>> Prok-E2_B  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.8e-06    0.0081      33     108 ..      47     116 ..      30     137 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.8e-06
   Prok-E2_B  33 tsggtvdlrlvypdsfpllppavflqdpeqlkllpHintfggaLClleeeldldewdpngsvadvleqlqqvLn.eg 108
                  sgg++ l++ +p ++p+ pp+v    +      p in+ +g +Cl       d+w p+ ++ +vl ++  +L+  +
  KHJ30624.1  47 YSGGVFFLAIHFPTDYPFKPPKVNFNTRI---YHPNINS-NGSICL---DILRDQWSPALTISKVLLSICSMLTdPN 116
                 389**********************9999...6799999.9*****...8999************988888887455 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   6.9e-06     0.031      55     109 ..      52     109 ..      11     115 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 6.9e-06
                 EEEEEEE-SSTTSS--EEEEEECC...SS-HHHHHHHHHHHHHHHHHT.TTS--CHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx RF
         RWD  55 lkleiklpeeYPeeaPiislsste...nlpkeqvksleekleelaeen.lgepvifali 109
                 + l i++p +YP ++P++++++     n+ ++  + + + l+++++       v+ +++
  KHJ30624.1  52 FFLAIHFPTDYPFKPPKVNFNTRIyhpNI-NSNGSICLDILRDQWSPAlTISKVLLSIC 109
                 6699****************999843322.23333356666666665545555555555 PP

>> UEV  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.2e-05     0.056      53     117 ..      55     114 ..      46     121 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.2e-05
                 EEE--TTTTTS--EEEE-GCC--TSGGGGGB-TTSBB--HHHH.S--TTT--HHHHHHHHHH---- CS
         UEV  53 liwvlesyPveaPivyvkptksmvikknenvdaqGlvylpyLe.eWkreksnlvslvqelaqafee 117
                  i  + +yP+++P v  + +       + n++++G + l++L+ +W++ + ++++++ +++++ ++
  KHJ30624.1  55 AIHFPTDYPFKPPKVNFNTRIY-----HPNINSNGSICLDILRdQWSP-ALTISKVLLSICSMLTD 114
                 6888999******987766544.....559************835776.66666665555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       262  (0.0146132); expected 358.6 (0.02)
Passed bias filter:                      238  (0.0132746); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 1151.67
//
Query:       KHJ30625.1  [L=249]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       796  (0.0443973); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1828.60
//
Query:       KHJ30626.1  [L=402]
Description: hypothetical protein EV44_g3209 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-10   41.5   0.1    1.1e-08   35.3   0.1    2.4  1  RNase_H        RNase H
  ------ inclusion threshold ------
      0.011   16.4   0.8       0.04   14.6   0.1    2.3  2  zf-RVT         zinc-binding in reverse transcriptase
      0.089   11.8   0.1       0.17   10.9   0.1    1.4  1  Rotavirus_VP1  Rotavirus VP1 C-terminal domain


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.1   1.9e-12   1.1e-08       3     143 .]     139     264 ..     137     264 .. 0.65

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 1.9e-12
                 SEEEEEEEEEECTTTCE.EEEEEECTT.....EEEEEEEC...CCCHHHHHHHHHHHHHHHTT.SCSEEEEEES-HHHHHHHHCCCHHHHHTTSSSETT CS
     RNase_H   3 avvvYtDGsclgnpgeg.gagavlykeg...arnisaple...eaqtnnraELsAvieaLkalksdekvniytDSkYvvkgitqwvhrwkknawkttse 94 
                 a ++YtDGs  ++ g+g  +g+v+y      a+ +s++l    + +++ +  +   i+ Lk+ +s+ k  i++DS+ ++  i++            +++
  KHJ30626.1 139 ASIIYTDGS--RTIGKGsSIGFVIYLPYtreANFYSFNLGdgvGITDAETYCILKSIKTLKNISSSRKCYIFSDSQAALLRIKN------------ANN 223
                 679******..44444449999776555332334456666333455555555555555566556779999*****655542222............222 PP

                 SSBHTTHHHHHHHHHCHCSSEEEEEE-SCCSSSTHHHHHHHHHHHHHHT CS
     RNase_H  95 qkpvknkdlaellkelakkkkvqlkwvkgHaGvpkgNemaDrlAkeaae 143
                           ++++++a++ +++++w++gH G+ +gNe aD lA+++ae
  KHJ30626.1 224 -------YFCHQIRRHAHNYQMSMEWCPGHIGI-EGNEIADGLARKGAE 264
                 .......22333445678999************.7***********985 PP

>> zf-RVT  zinc-binding in reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.86   5.1e+03      13      27 ..     284     298 ..     277     301 .. 0.73
   2 ?   14.6   0.1   6.7e-06      0.04      45      79 ..     353     387 ..     322     391 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.86
      zf-RVT  13 kkekvklakliWksk 27 
                 ++e  k +++iW+  
  KHJ30626.1 284 NQEILKAWRKIWNVE 298
                 4455688999**975 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 6.7e-06
      zf-RVT  45 ptadnllkrgiesssrCqlCgqeeEtieHlfleCp 79 
                 +++  l+k g ++ss+C +C + + t+ Hl+l+C 
  KHJ30626.1 353 NMRAYLHKIGKTKSSTCNFCLKGKQTTAHLLLQCD 387
                 5677899999999*********************6 PP

>> Rotavirus_VP1  Rotavirus VP1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   2.8e-05      0.17     275     302 ..     274     301 ..     263     306 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 2.8e-05
  Rotavirus_VP1 275 eiislsvnankseylklwkklwnvkslr 302
                      is+  +    e+lk w+k+wnv+ lr
     KHJ30626.1 274 ITISVLKENANQEILKAWRKIWNVELLR 301
                    3455555677889***********9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2853.02
//
Query:       KHJ30627.1  [L=664]
Description: putative carboxypeptidase s1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-69  234.6   0.0    6.3e-69  233.4   0.0    1.6  1  Peptidase_S10  Serine carboxypeptidase


Domain annotation for each model (and alignments):
>> Peptidase_S10  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.4   0.0   3.5e-73   6.3e-69       9     419 .]      54     527 ..      43     527 .. 0.82

  Alignments for each domain:
  == domain 1  score: 233.4 bits;  conditional E-value: 3.5e-73
                    SEEEEEEEECSTTTTEEEEEEEEE-SSGTTTS-EEEEE--TTTB-THHHHHHTTSSEEEETTTTSEEEE..-TT-GGGCSEEEEE--STTSTT-EE CS
  Peptidase_S10   9 fkqysGYldveeeedkslFYwfveseknpeedplvlWLnGGPGCsSldGlleElGPfrvnkdstkklee..npysWnkvanvlfldqPvGvGFSys 102
                     +qy+G++++ ++  +++F+wf+ +++   +d lv+WLnGGPG+sSl Gl+ E+GP++v k+++ kle+  +++ W++ an+l++dqP  vGFSy+
     KHJ30627.1  54 QQQYTGWVNAPTDYASNTFFWFIAAREP--TDQLVIWLNGGPGSSSLLGLFSENGPCEVIKSTNLKLETraREWGWDRGANMLYIDQPNQVGFSYD 147
                    589**********************994..699**************************9777777765227899********************* PP

                    TTSSG.S--SH......................................HHHHHHHHHHHHHHHHHSTCGTTS...EEEEEEETTHHHHHHHHHHH CS
  Peptidase_S10 103 ntksd.vktdd......................................eevaedlyefLkkffekfpeyksr...dfyitGESYaGhyvPalake 156
                      ++  +  d                                       +  +  ++++L+ ff  fp+y s+    +++ +ESY+G+y P +ak 
     KHJ30627.1 148 IPTNGsI--DLltsniyippqmapkiqlpttflngtfssmnknntakttQASGMVIWHMLQGFFGAFPQYSSNlsaSVHLFAESYGGKYGPEFAKL 241
                    8888841..3345669*****************************997666677789*************6655559******************* PP

                    HHTHCCH--S........STSEEEEEEEESE-SBHHHHHCCHHHHHHHTTSSHHHHHHHHHHHHEET.....HHHHHHHHHHHHHHHHHHHHHHHH CS
  Peptidase_S10 157 ilkknkkekk........kkinLkGlligNglideaeqvnsyvefayehgliseeeyeslkkacekk.....eeleqesekcanllekaskvavek 239
                      ++n+k+ +         +i + +l i+Ng++d+  q+++++++a++  +   ++++ ++ + + +     + +++ +++c +++   + ++   
     KHJ30627.1 242 WENQNQKRFNgqiprdstIEIKILSLGIINGCVDDLVQAPYWPMMAVNNTFG-LSTINPIRAELALNsfyapSGCKDLIQQCRSAVTLQDPENSG- 335
                    *****9987799999987888889****************999976665543.355666666665555555589999999998888766654422. PP

                    HCHCEETTETTSEETT.SSEE.........HHHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT--TTSSS--SB-HHH...HHHCTCCC-SBCHH CS
  Peptidase_S10 240 enkglnvynileecck.lkae.........lkksstdaqggedpydesyvekylnkkeVrkalhvnasvkkweecndsv...feqleddisksvee 322
                      ++ +v ++ ++ +    +e          ++  + +q     + + ++ +y+n++e  +a++   s  ++++ +++v   f +++d+ ++  ++
     KHJ30627.1 336 --ERADVNKLCSAAYAsC-SEkvmsayldaGRSIYDISQLLPETFPPGAYLEYVNTAEFLSAIG---SPVNFTQNSQQVistFIETGDYERQAPIP 425
                    ..2333333333332211.11234455665666666777788889999***************9...45899999999999999999********* PP

                    HHHHHHHTT-EEEEEEETT-STT-HHHHHHHHHHTECTT....ECCSCCCEEEE.TTTCESEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH CS
  Peptidase_S10 323 ileellesglrvliynGdvDlicnvlgteawikklelsg....kkefrpwevsp.kkengqvaGyvkeyenltfltvkgaGHmvPedkpeealqll 413
                    ++  ll+sg+rv  ++Gd D+icn+ g ea++ ++  ++    +++f ++ ++p   +++ ++G v++++nl+f ++++aGH vP ++pe ++q++
     KHJ30627.1 426 VIAALLKSGVRVGFIYGDRDYICNWYGGEAISFAVAAETsplyASNFPAAGYEPiIVNTSYIGGAVRQFANLSFSRIYDAGHSVPAYQPETSFQVF 521
                    ******************************998855554111156666666666777888999********************************* PP

                    HHHHTT CS
  Peptidase_S10 414 erfisg 419
                     r+i+g
     KHJ30627.1 522 ARIIKG 527
                    **9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (664 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       466  (0.0259914); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 4533.29
//
Query:       KHJ30628.1  [L=120]
Description: putative 50s ribosomal protein l13 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.6e-34  117.1   0.0      7e-34  116.8   0.0    1.1  1  Ribosomal_L13  Ribosomal protein L13


Domain annotation for each model (and alignments):
>> Ribosomal_L13  Ribosomal protein L13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.8   0.0   3.9e-38     7e-34      24     122 ..       1     100 [.       1     102 [. 0.97

  Alignments for each domain:
  == domain 1  score: 116.8 bits;  conditional E-value: 3.9e-38
                    HTTTSTT--TTS--S-EEEEEEGGCBB-SSTHHTT-EEEEE-SSTTSEEEEEHHHHHCCSH.HHHHHHHHHCCS-SSHHHHHHGCTEEEESSSTTS CS
  Ribosomal_L13  24 rGkhkptytphvdcGdyvvvinaekvaltgkkleqkvyyrhtgypgglkevtakellekkp.eeilekaVkgmLpknklgrrrlkrLkvyageehp 118
                    +Gkhkp+++p++dcGdyv+v+n++++ +tgkk  qk+yyrh+++pg+l++ t+  l++k+   e+l+kaV+gmLpkn+l+++rl rLk ++ge+hp
     KHJ30628.1   1 MGKHKPIWDPATDCGDYVIVTNCSQLYTTGKKRWQKKYYRHNTRPGSLQTLTMYGLMAKQGgAEVLRKAVNGMLPKNRLRDDRLARLKAFEGERHP 96 
                    8******************************************************99887769********************************* PP

                    GGGG CS
  Ribosomal_L13 119 heaq 122
                    ++a+
     KHJ30628.1  97 YNAN 100
                    9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 857.55
//
Query:       KHJ30629.1  [L=188]
Description: putative 60s ribosome subunit biogenesis protein nip7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-25   90.1   0.0    1.5e-25   89.6   0.0    1.2  1  UPF0113_N  UPF0113 Pre-PUA domain
    1.1e-24   86.5   0.0    1.5e-24   86.0   0.0    1.2  1  UPF0113    UPF0113 PUA domain
  ------ inclusion threshold ------
       0.17   11.9   0.0       0.29   11.1   0.0    1.3  1  PUA        PUA domain


Domain annotation for each model (and alignments):
>> UPF0113_N  UPF0113 Pre-PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.6   0.0   2.4e-29   1.5e-25       1      82 []       2      88 ..       2      88 .. 0.97

  Alignments for each domain:
  == domain 1  score: 89.6 bits;  conditional E-value: 2.4e-29
   UPF0113_N  1 RklseeetrivfekLtkyigdnvkelld......rkdgtycfrlkkkrVyyvseellklaetikpenlisaGtclGkftktkkFrlsi 82
                R+l+e et+++f+kL++y+g+++k+l+       + d  y+frl+++r yyv+ ++++la +i+++nl+s+GtclGkftkt+kFrl+i
  KHJ30629.1  2 RPLTETETQTLFNKLANYTGNSLKNLIAplenvpNAD-RYVFRLHESRCYYVKLSIANLATSIPRDNLLSLGTCLGKFTKTGKFRLHI 88
                99******************************95555.9************************************************8 PP

>> UPF0113  UPF0113 PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.0   0.0   2.6e-28   1.5e-24       1      76 []     101     180 ..     101     180 .. 0.98

  Alignments for each domain:
  == domain 1  score: 86.0 bits;  conditional E-value: 2.6e-28
     UPF0113   1 kvvvkekaeklFLYGrdvlkesilkitesvkenqvvvVlnengeplGiGkirkdt...k.aspgkivvknlaDiGeYlRr 76 
                 k++vk ++e+ FLYG +vlk ++ + +e+++e+q+vvV+++n+ plG+G+++++t   k ++p+ i++ ++aD+Ge+lR+
  KHJ30629.1 101 KIWVKANGEMPFLYGGHVLKAHVGRWSEDCPEHQGVVVYSMNDVPLGFGVTARSTqetKkLDPTTITCFRQADCGEFLRD 180
                 89*******************************************************977*******************5 PP

>> PUA  PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   4.8e-05      0.29       2      62 ..     101     161 ..     100     164 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4.8e-05
                 EEEE-HHHHHHHHTT-EEEGGGEEEEETT--TTSEEEEEETTSCEEEEEEESS-HHHHHHH CS
         PUA   2 rvvvddgAvkallsgasLlapGvvevegdfeegdvVaivdedgelvavGlanysseelaki 62 
                 +++v+++     l+g ++l + v +  +d+ e + V++++ ++ +++ G++  s++e +k 
  KHJ30629.1 101 KIWVKANGEMPFLYGGHVLKAHVGRWSEDCPEHQGVVVYSMNDVPLGFGVTARSTQETKKL 161
                 5666666666678899***************************************999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       339  (0.0189079); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1411.31
//
Query:       KHJ30630.1  [L=771]
Description: putative glucose-repressible alcohol dehydrogenase transcriptional effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-14   54.2   1.1    3.4e-13   49.7   0.4    2.6  2  Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
    4.6e-07   30.1   4.2    5.4e-05   23.5   1.0    2.7  2  LRR_4          Leucine Rich repeats (2 copies)
    1.4e-06   28.0   4.6      1e-05   25.2   2.0    2.5  2  LRR_8          Leucine rich repeat
     0.0012   19.1   1.2        1.9    9.4   0.1    3.7  3  LRR_1          Leucine Rich Repeat
  ------ inclusion threshold ------
        5.9    6.8  12.5         11    5.9  12.5    1.3  1  TFIIA          Transcription factor IIA, alpha/beta subunit


Domain annotation for each model (and alignments):
>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.64   2.3e+03      64      83 ..      52      96 ..      12     182 .. 0.69
   2 !   49.7   0.4   9.4e-17   3.4e-13       2     233 .]     394     736 ..     393     736 .. 0.69

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.64
                   H.........................ECSSSTTSSEEEEEECSTE CS
                   x.........................xxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 64 p.........................tgggggggnggavlsrfpl 83
                   p                         +g+++ggg g+ +l++f+ 
     KHJ30630.1 52 PtkspellssapglysmynqshqqqqHGRVNGGGRGMPILYNFQH 96
                   144444444444455555555556667777777777777777765 PP

  == domain 2  score: 49.7 bits;  conditional E-value: 9.4e-17
                    EEEESTG...........CHHHHTHHHHHHHHHHHHHHCTTSEEEEEEEBSCTCHHHHHHHHH.....TTCEEEEECCH.ECSSSTTSSEEEEEEC CS
                    xxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxx.xxxxxxxxxxxxxxxx RF
  Exo_endo_phos   2 twNvngq...........aspalgssrrsdrladlltaydaDvlgLQEvdddelsriplllal.....ggflgasstsp.tgggggggnggavlsr 80 
                    ++N++++           +  al++ +r  ++++++ta++aD ++LQEvd d   +     ++     g f++ s+ ++ +    ++ +g+a++++
     KHJ30630.1 394 SFNILSNqactqrlygytPQAALSWEHRREAVLNEITATNADFVCLQEVDTDTFREYFSMKLAyadykGVFWPRSRAKTmSEKDAKNVDGCATFYK 489
                    7899999999999999998899**************************999975554444433555665555555555599999999999999999 PP

                    STE.....EEEEEEEEEETSSSSGCEEEEEEEEEEEEEEE........................................................ CS
                    xxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................................................ RF
  Exo_endo_phos  81 fpl.....tslfrrtfiefndlvaalrreplaakleqlni........................................................ 115
                    +++     ++l+    +  n++++      ++                                                                
     KHJ30630.1 490 HQNyllldKQLVDFANVAINRPDMKNQHDIFN-------Rvmprdhigvvcffenrltgsrlilvnthifwdpiyadvkliqtaillgevnrlaek 578
                    99966644333222222222222222222222.......122333446666666666666666666666666666666666666666666666666 PP

                    ..................CCCHHGHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SSSTSGGGBSCGHHHHHHCTTTH........H........ CS
                    ..................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........x........ RF
  Exo_endo_phos 116 ..................ashrdhdlvrdlqllalllqvealnadrgapvivaGDfNarpsdddsrvlrtrglalapap........v........ 177
                                      +s+ d+++   +    +          ++ p+i++ D+N++  ++++ +l+ +   + +          +        
     KHJ30630.1 579 yvkwgprkenkllnqtdeNSVSDVREQTPQPSKEYAS-------KTQIPLIICSDLNSTAESGVFELLARGTVKPNHPElggrsygnFtkdgidhp 667
                    6666666666655555553333333333333333332.......34445777***********************999987776665055666777 PP

                    ........SSCESCETTTTTTTTTTTEB-BEEEEEEC.HHHCCEEEEEEECCHHEEC....TSSCSSSB CS
                    ........xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxx....xxxxxxxx RF
  Exo_endo_phos 178 ........glyllgggptptyvtraggsrlDrilasp.alalfrsgvlppplalvrr....ealtlSDH 233
                            +l     +  +t+ t+++++ +D+i++s+ al+ ++++ + +p+         + +++SDH
     KHJ30630.1 668 fslksaytNLDKSQDSVPFTNYTPGFRGVIDHIWYSTnALENISLLGQVDPEYMKTVpgfpNHHYPSDH 736
                    788999*******************************99999998888887655444888888888888 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   1.0   1.5e-08   5.4e-05       3      39 ..     261     297 ..     260     302 .. 0.87
   2 !    6.9   0.1    0.0025         9       3      38 ..     307     342 ..     307     346 .. 0.85

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 1.5e-08
                 --EEE--SS---E-S-.HHH-TT--EEE-.-S-----G CS
       LRR_4   3 LevLdLsnNqltdipl.leklpnLkeLdLsgNnlitdl 39 
                 L++L+L++N lt +p+ ++kl +L++Ld  +Nn++++l
  KHJ30630.1 261 LRELYLASNSLTLLPPsIGKLRHLTHLDA-SNNQLSSL 297
                 9***************6668*********.66699887 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0025
                 --EEE--SS---E-S-.HHH-TT--EEE-.-S----- CS
       LRR_4   3 LevLdLsnNqltdipl.leklpnLkeLdLsgNnlitd 38 
                 L++L  ++Nq+ ++p  l++l +L+ L + gN ++++
  KHJ30630.1 307 LKKLLVFDNQIMKLPHeLGSLFQLEMLGIEGN-PLDT 342
                 899*************8888999999999999.5544 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   2.0   2.8e-09     1e-05       3      61 .]     261     317 ..     260     317 .. 0.96
   2 !    5.2   0.3     0.005        18      33      61 .]     313     340 ..     307     340 .. 0.86

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 2.8e-09
                 -SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   3 LtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 L++L+L +N+lt l+++  k l++L++Ld snN+l++l p+ +  +  L++L + +N++
  KHJ30630.1 261 LRELYLASNSLTLLPPSIGK-LRHLTHLDASNNQLSSL-PRELGMCVYLKKLLVFDNQI 317
                 89*****************9.*****************.89999999******999997 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.005
                 -SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8  33 snNllttlspgafsgLpsLrsLdLsgNrL 61 
                  +N++  l p+ + +L +L++L ++gN+L
  KHJ30630.1 313 FDNQIMKL-PHELGSLFQLEMLGIEGNPL 340
                 57999999.9*****************97 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.1   0.00052       1.9       2      23 .]     261     281 ..     260     281 .. 0.90
   2 !    6.0   0.1    0.0067        24       1      16 [.     283     298 ..     283     304 .. 0.81
   3 ?   -1.3   0.0       1.7   6.1e+03       2      14 ..     330     342 ..     329     352 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00052
       LRR_1   2 LrhLdLsnnpllglppnsfqnL 23 
                 Lr+L+L +n+l  l+p+s+ +L
  KHJ30630.1 261 LRELYLASNSL-TLLPPSIGKL 281
                 9**********.6999999876 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0067
       LRR_1   1 nLrhLdLsnnpllglp 16 
                 +L+hLd snn+l++lp
  KHJ30630.1 283 HLTHLDASNNQLSSLP 298
                 69**********6554 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 1.7
       LRR_1   2 LrhLdLsnnpllg 14 
                 L+ L +++npl+ 
  KHJ30630.1 330 LEMLGIEGNPLDT 342
                 777889****954 PP

>> TFIIA  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  12.5     0.003        11     149     281 ..      26     191 ..       4     247 .. 0.50

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.003
       TFIIA 149 sgaqqiaaqplqqvvqq......sqgsaaqssvaalqaqsqqaqalaepqqqlekq.................qqqqqqqqqqqqqqqvqqqqqe.... 220
                 s+ qqi+ ++   +         + +++++ ++ +++++  ++  ++ +qq    q                 q+q  +qq++q+ +++qq++ +    
  KHJ30630.1  26 SKHQQIIRKNTPPNNIGvsfnakTPSPTKSPELLSSAPGLYSMYNQSHQQQ----QhgrvngggrgmpilynfQHQNSHQQHTQHHSTIQQDHTShtvn 120
                 333333333333322212222222223333333333333222222222222....12345677888888888766655555555555566555555677 PP

       TFIIA 221 .........esqqaqqa..sqe..qvagsqvessqtdgaedaleeespv.legelsaeeeagaqkeelsreeidr 281
                          +s+    +  +++  ++a+s+++s q  +  ++++++ +  +  +l+ ++e++  +  ++++ + +
  KHJ30630.1 121 gsvlnrhtsHSS----SvlTNStpTFAPSGLHSGQSTSTRSEQTSQISEhWSEQLLLHKESERLHYDAKDRGVTN 191
                 777664322111....12222245888888888877777766666555468888877777766655555444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (771 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       702  (0.0391544); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.31s 00:00:00.98 Elapsed: 00:00:00.47
# Mc/sec: 4959.65
//
Query:       KHJ30631.1  [L=1084]
Description: hypothetical protein EV44_g6356 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.1e-36  123.1   0.1    1.9e-35  122.0   0.1    1.6  1  RhoGAP           RhoGAP domain
    4.7e-28   97.2  51.8    3.5e-12   46.4   7.6    5.5  5  LIM              LIM domain
  ------ inclusion threshold ------
        8.7    6.1   7.5       0.62    9.7   0.1    3.1  3  Desulfoferrod_N  Desulfoferrodoxin, N-terminal domain


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.0   0.1   3.1e-39   1.9e-35       1     147 [.     880    1031 ..     880    1036 .. 0.97

  Alignments for each domain:
  == domain 1  score: 122.0 bits;  conditional E-value: 3.1e-39
                  BHHHHHHHHHHHHHTTTSTTTTTS-S-HHHHHHHHHHHHHTGGGCTTTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHHHHTSSSHHHHHHHHH CS
      RhoGAP    1 PiivekcvefiekrgldtegiyRvsgskarvkelreafdkgkavdsdleeedvhavaslLKrfLrelpepLltkelyeelieaaksedeeerlealk 97  
                  P+iv++ v  ++k +l +eg++R++g+ +r++e ++ +dk+   + d+++e+v ++a+lLK++Lrelp+pLlt++l+  +i  +k+ de++r + l+
  KHJ30631.1  880 PAIVDDAVTTMRKMDLSVEGVFRKNGNIKRLNETTAIIDKDGCDVVDFSKENVVQIAALLKKYLRELPDPLLTYKLHRLFITSQKIADEDKRRRVLH 976 
                  99*****************************************999*************************************************** PP

                  HHHTTS-HHHHHHHHHHHHHHHHHHHTHHH.....H---HHHHHHHHHHHHHT-T CS
      RhoGAP   98 ellekLPkenrdtLryLlehLkrvaenske.....nkMtaknLaivfaPtLlrpk 147 
                   ++  LPk++rd+L+ L++++++va+ ++       kM+ +nLa+v+aP++l ++
  KHJ30631.1  977 LTCCLLPKAHRDCLEILCSFFNWVASFHQIdeesgSKMDTHNLATVIAPNILFTN 1031
                  **************************999889999****************9765 PP

>> LIM  LIM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   1.2   5.1e-13     3e-09       1      57 [.     115     174 ..     115     175 .. 0.86
   2 !   46.4   7.6   5.8e-16   3.5e-12       1      57 [.     179     234 ..     179     235 .. 0.97
   3 !   10.9   0.9     7e-05      0.42       1      27 [.     239     267 ..     239     269 .. 0.84
   4 ?   -0.1   0.0      0.18   1.1e+03      36      52 ..     377     394 ..     374     397 .. 0.82
   5 !   18.3  18.7   3.3e-07     0.002       1      53 [.     491     545 ..     491     549 .. 0.79

  Alignments for each domain:
  == domain 1  score: 37.0 bits;  conditional E-value: 5.1e-13
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT.CEEETTE......EEEHHHHHHH CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegsfyekdgk......lyCkkdylkk 57 
                 C++C++  +  + v +al+ ++H +CF+C+dC++  +++ f+ +d++      ++C++dy+++
  KHJ30631.1 115 CKKCGEVLK-GQFV-RALGGTFHLDCFRCQDCGQIVASK-FFPIDEEkgegqyPLCETDYFRR 174
                 9***99888.5555.5********************999.6666664488999*******986 PP

  == domain 2  score: 46.4 bits;  conditional E-value: 5.8e-16
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT..CEEETTEEEEHHHHHHH CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegs.fyekdgklyCkkdylkk 57 
                 C++Cn   + ++++  al+k++H+++FtCs+C + +  ++ +ye++g++yC+++y ++
  KHJ30631.1 179 CYKCNTALRGSYIT--ALEKKYHINHFTCSVCPTVFGAQDsYYEHNGQVYCHYHYSTQ 234
                 *********99999..***************************************876 PP

  == domain 3  score: 10.9 bits;  conditional E-value: 7e-05
                 -TTT--BE-TT..TEEEEETTEEEETTTS CS
         LIM   1 CagCnkkiadr..elvlkaldkvwHeeCF 27 
                 C+gC   i ++  e++++ ++++wH+eC+
  KHJ30631.1 239 CNGCYTAILKQfvEIFRNGQNQHWHPECY 267
                 9*******97622567899*********7 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.18
                 -CTT..CEEETTEEEEHH CS
         LIM  36 Lkegs.fyekdgklyCkk 52 
                 + +++  y +++kl+Ckk
  KHJ30631.1 377 FGPKGlSYTREAKLLCKK 394
                 667777899*******97 PP

  == domain 5  score: 18.3 bits;  conditional E-value: 3.3e-07
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT...CEEETT..EEEEHHH CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegs..fyekdg..klyCkkd 53 
                 C +C+k+i+ +e + ++++++wH  C++Cs+C++eL ++   + +  g   + C+++
  KHJ30631.1 491 CFSCKKTIE-DECC-RFQERRWHFTCLKCSKCHRELHQNLedLRLNHGelHICCSNC 545
                 99*******.4445.6********************998776555544345788887 PP

>> Desulfoferrod_N  Desulfoferrodoxin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.3      0.49   2.9e+03       9      15 ..     115     121 ..     111     123 .. 0.83
   2 ?    9.7   0.1    0.0001      0.62       3      16 ..     135     148 ..     133     150 .. 0.90
   3 ?   -3.5   0.3       1.4   8.5e+03      25      33 ..    1048    1056 ..    1047    1058 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.49
                      -TTT--E CS
  Desulfoferrod_N   9 CevCGni 15 
                      C+ CG++
       KHJ30631.1 115 CKKCGEV 121
                      99***98 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0001
                      TT-EEE-TTT--EE CS
  Desulfoferrod_N   3 klevYkCevCGniV 16 
                      +l+ ++C+ CG+iV
       KHJ30631.1 135 HLDCFRCQDCGQIV 148
                      6899*********9 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 1.4
                       -EEETTEE- CS
  Desulfoferrod_N   25 eLVCCgepM 33  
                       +L+ C+e M
       KHJ30631.1 1048 TLIECNEQM 1056
                       5788***99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1084 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       685  (0.0382063); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.31s 00:00:01.01 Elapsed: 00:00:00.47
# Mc/sec: 6865.92
//
Query:       KHJ30632.1  [L=186]
Description: hypothetical protein EV44_g3272 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       523  (0.0291706); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1392.01
//
Query:       KHJ30633.1  [L=282]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2153.06
//
Query:       KHJ30634.1  [L=205]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.11   12.6   0.0       0.26   11.4   0.0    1.6  1  Arm-DNA-bind_1  Bacteriophage lambda integrase, Arm DNA-bindi


Domain annotation for each model (and alignments):
>> Arm-DNA-bind_1  Bacteriophage lambda integrase, Arm DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   1.5e-05      0.26      34      61 ..     169     196 ..     165     202 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.5e-05
                     TTTS-EEEEESSHHHHHHHHHHHHHHHT CS
  Arm-DNA-bind_1  34 PvtgkfhsLGtdereAieeAveaNtrla 61 
                     P  g  h+LG+d+  A++ Av+    + 
      KHJ30634.1 169 PSKGSSHGLGKDKITAKKVAVAIPRSIT 196
                     88999****************9877775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       552  (0.0307881); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1607.45
//
Query:       KHJ30635.1  [L=99]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.071   13.0   2.6       0.13   12.1   2.6    1.5  1  zf-CCHC_6  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   2.6   7.4e-06      0.13       3      19 ..       5      20 ..       4      40 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 7.4e-06
   zf-CCHC_6  3 KCknCGAFGHtarSkrC 19
                KC+nCG + H+  ++rC
  KHJ30635.1  5 KCRNCGGL-HRSDNRRC 20
                9******9.******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       738  (0.0411624); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 741.89
//
Query:       KHJ30636.1  [L=310]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2304.75
//
Query:       KHJ30637.1  [L=517]
Description: putative origin recognition complex subunit 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.9e-119  398.5   1.0   2.6e-119  398.0   1.0    1.2  1  ORC2      Origin recognition complex subunit 2
  ------ inclusion threshold ------
      0.076   13.5   1.6       0.19   12.2   0.2    2.3  2  DUF806    Protein of unknown function (DUF806)


Domain annotation for each model (and alignments):
>> ORC2  Origin recognition complex subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  398.0   1.0  2.9e-123  2.6e-119       1     332 []     170     507 ..     170     507 .. 0.97

  Alignments for each domain:
  == domain 1  score: 398.0 bits;  conditional E-value: 2.9e-123
                 XXXXXXXXX-TTTHHHHHHHHHHHHHSHHHHHHHHHHHGGGHHHHHHHHHTT-EEEE--SS--HHHHHHHHSSS----...SSS-EEEE----TT--SH CS
        ORC2   1 SnntlsslplLdeeeyerlleklkdthekekekLeklhkklfpqwlfeLeqGFslllyGvGSKrklleeFaeellskr...kdgpvvvvnGylpsltlk 96 
                 Snntlssl+lLd++ey++   +l++  +++ ++Le++h  +f+qw feL+q+F+l+lyG+GSKr+ll +Fa+ l+++r   ++ ++v++nGyl ++t++
  KHJ30637.1 170 SNNTLSSLELLDHKEYFSRYYNLRNLYQDDLKNLEEIHLDKFNQWQFELSQDFNLCLYGFGSKRSLLMQFADYLYNARkfqERSEIVIINGYLSTITIR 268
                 8***************************************************************************999*9999*************** PP

                 HHHHHHHHTT--S.---SSS--HHHHHHHHHHHHHS--S-..S--EEEES-SSSTTTTSHHHHHHHHTTTT-SSSEEEEE--STTHHHH--HHHHTTS- CS
        ORC2  97 dilseiasallekkeakklsssvaaqlekilslleekeseeksklylvihniDgpsLrkekaqalLarLaaipqIhliasiDhinapllwdssklsqfn 195
                 di++++as ++++     ++ss+ ++le+i  ll++++      ++l+ih+iDg  Lr+   q+lLarL+++pqIhlias+Dh+++pllwdss +s +n
  KHJ30637.1 269 DIFKTVASVMTSE---ILKFSSPPDMLETIFGLLDQDKY---LDIMLIIHSIDGHVLRRLPNQNLLARLSSHPQIHLIASADHPSFPLLWDSSLRSMYN 361
                 *******999888...89****************88854...58******************************************************* PP

                 EEE---------GGGGGG--.-TT---.--.----HHHHHHHHHHS-HHHHHHHHHHHHHHHT......-...-------------------BHHHHHH CS
        ORC2 196 fvfhdvtTfapysaElsfedevlellgrskrrvggkegakfVLkSLtenarklfklLveeqLe......k...keseekkekskkgseeagveykelyn 285
                 f+f+d+tTf+ y+aE+++++ev+e lgrs+rrvgg +g+ fVLkSL+ena+klf++L++eqL+      +   +++++++++s+ ++ + g+ey+ ly+
  KHJ30637.1 362 FLFYDCTTFQAYNAEIDVVQEVHEILGRSGRRVGGIDGVIFVLKSLPENAKKLFEVLIKEQLKvtagdcNtfeDDKDDEDQRSRYQETQLGIEYRVLYQ 460
                 ***************************************************************9998882465788888888999999*********** PP

                 HHHHS--SSSGGGHHHHHHHHTTTTSS-B--------BB--S--HHH CS
        ORC2 286 kareefivssemalrtlLkEFkDHklikskkdasgtevlsiplrkee 332
                 k +eefi+s+e+++rtlLkEF DH++i+skkda g+e+l+ip+++ee
  KHJ30637.1 461 KSVEEFICSNEINFRTLLKEFNDHQMIQSKKDAIGSELLIIPFSREE 507
                 ********************************************986 PP

>> DUF806  Protein of unknown function (DUF806)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1      0.23   2.1e+03      19      39 ..      58      78 ..      51     121 .. 0.81
   2 ?   12.2   0.2   2.2e-05      0.19      51     101 ..     441     492 ..     420     497 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.23
      DUF806 19 Devysesipkeklentdktvv 39
                D+ +++ i+k+++ + +k  v
  KHJ30637.1 58 DKNFKNRIEKNHDRSAKKKSV 78
                788999999999988877655 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 2.2e-05
      DUF806  51 yanstfkslalgvevQiFykkeleedilnaEiellkklkd.ndWliessksh 101
                  + s++++ +lg+e  + y+k +ee i+  Ei+    lk+ nd ++++sk+ 
  KHJ30637.1 441 DQRSRYQETQLGIEYRVLYQKSVEEFICSNEINFRTLLKEfNDHQMIQSKKD 492
                 45678999************************99888876577888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1068  (0.0595683); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3668.26
//
Query:       KHJ30638.1  [L=339]
Description: putative cyclopropane-fatty-acyl-phospholipid synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-40  138.7   0.5    3.2e-40  138.2   0.5    1.1  1  CMAS             Mycolic acid cyclopropane synthetase
    1.1e-15   58.1   0.0    1.8e-15   57.3   0.0    1.4  1  Methyltransf_11  Methyltransferase domain
    1.6e-13   51.2   0.0    2.7e-13   50.4   0.0    1.4  1  Methyltransf_25  Methyltransferase domain
    6.5e-13   48.7   0.0    1.2e-12   47.9   0.0    1.5  1  Methyltransf_31  Methyltransferase domain
    1.1e-11   44.8   0.0    1.7e-11   44.3   0.0    1.3  1  Methyltransf_23  Methyltransferase domain
    9.6e-11   42.3   0.0    1.7e-10   41.5   0.0    1.4  1  Methyltransf_12  Methyltransferase domain
    2.6e-06   27.1   0.0    5.4e-06   26.1   0.0    1.5  1  MTS              Methyltransferase small domain
    3.6e-06   26.5   0.0    1.1e-05   24.9   0.0    1.7  2  Ubie_methyltran  ubiE/COQ5 methyltransferase family
    3.4e-05   23.4   0.0    0.00017   21.1   0.0    1.9  2  Methyltransf_4   Putative methyltransferase
    3.7e-05   23.2   0.0    8.6e-05   22.0   0.0    1.5  1  TehB             Tellurite resistance protein TehB
    0.00078   19.3   0.0     0.0027   17.5   0.0    2.0  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
    0.00091   19.0   0.0     0.0017   18.2   0.0    1.4  1  DUF938           Protein of unknown function (DUF938)
     0.0035   16.7   0.1     0.0097   15.3   0.0    1.7  2  GidB             rRNA small subunit methyltransferase G
  ------ inclusion threshold ------
      0.038   13.3   0.0        0.1   11.9   0.0    1.6  1  Methyltransf_2   O-methyltransferase domain
      0.048   13.3   0.0        0.1   12.3   0.0    1.4  1  Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
       0.13   12.2   0.0       0.25   11.3   0.0    1.4  1  Methyltransf_17  S-adenosyl-L-methionine methyltransferase


Domain annotation for each model (and alignments):
>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.2   0.5   2.8e-43   3.2e-40       7     265 ..      61     323 ..      57     330 .. 0.85

  Alignments for each domain:
  == domain 1  score: 138.2 bits;  conditional E-value: 2.8e-43
                 HHHHHHHHTS-HHHHCTTS-TT---S----SSTT--HHHHHHHHHHHHHTTTT--TT-EEEEES-TTSHHHHHHHHHH.--EEEEEES-HHHHHHHHHH CS
        CMAS   7 venikahYDlsndffalfldptmtYsCAyferddmtLeeAqlaKldlileklelkpGmtlLdiGcGWGslvrravery.dvkvvglTlSkeqaklakkr 104
                 +++ ++hY+++    a+ l+p m+YsCA +++  +tL++A +a l+  ++k++lk+Gmt+Ld+GcGWGs + + +e + + ++v+   Sk q+ +    
  KHJ30638.1  61 ATANEQHYEVGTGVLAACLGPRMKYSCALYRKGGETLAQAEIAMLESYVQKAGLKDGMTILDLGCGWGSGALYFAEIFpNSEIVAFSNSKTQKIYIDSI 159
                 567789**********************************************************************996789***************** PP

                 HHTS-SSS-EEE..EES-GGG-----SEEEEES-GGGTSGGGHHHHHHHHHHHS-TT-EEEEEEEEE--HHHHHCTTCCCHHHHHHTSTTS---BHHHH CS
        CMAS 105 vdeldlerkvev..klldyedldekvdrvvsvgafehvgkenydtffkklkkllkedGllllhtitslhkkelaerglklkfidkeiFPgGelpsieei 201
                  +e dl++ + +  ++ dye  +e +drvvs+++feh+  +ny+  ++k++++lk++G l +h     ++        +  +++++ F gG++ps + +
  KHJ30638.1 160 AKEKDLKNLRVItgNVVDYEFEKEYFDRVVSIELFEHM--KNYELLMAKVERALKPGGKLFIHIFAHATSPYDF----EDGWMSTHFFSGGTMPSADLL 252
                 *****998887733589**98899*************7..79*********************77666555554....347****************99 PP

                 HHHHHHTT-EEEE.EEE-HHHHHHHHHHHHHHHHHTHHHHHHHSHH........HHHHHHHHHHHHHHHHHHT CS
        CMAS 202 eeeiseagftvvd.veslrahYakTLkaWaealqenkdeaialvse........evarmyelYLagcaeaFrk 265
                  +  ++  +++++ +   ++hYakT ++W  +++ nk+ +    se        + +++++ +  +cae F  
  KHJ30638.1 253 LYFQRD--LKLERqWWISGTHYAKTCEDWLSKMTINKKTIWPHLSEtygekdtaKWYNRWQIFYMACAELFAY 323
                 996555..555541445589*************99988876444331111222267999**********9976 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.3   0.0   1.6e-18   1.8e-15       1      96 []     121     219 ..     121     219 .. 0.94

  Alignments for each domain:
  == domain 1  score: 57.3 bits;  conditional E-value: 1.6e-18
                      EEET-TTSHHHHHHHHTT..SEEEEEES-HHHHHHHHHHCCHHT-.EEEETTEECCCTSS-TT-EEEEEEES-CCC-CCHHHHHHHHHHHEEEE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg..arvvgvDlskemlklakekaseegl.kvefvvadaeklpfednsfDlvvssevlhhvedpekalkeiaRvLkpg 91 
                      Ld+GcG G+ a ++a+ +  +++v++  sk++  +  + a+e++l +++++ +++ +  fe+++fD vvs e ++h+++ e +++++ R Lkpg
       KHJ30638.1 121 LDLGCGWGSGALYFAEIFpnSEIVAFSNSKTQKIYIDSIAKEKDLkNLRVITGNVVDYEFEKEYFDRVVSIELFEHMKNYELLMAKVERALKPG 214
                      8**************999**************9777666666666789********************************************** PP

                      EEEEE CS
  Methyltransf_11  92 Gllvi 96 
                      G+l+i
       KHJ30638.1 215 GKLFI 219
                      **986 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.4   0.0   2.4e-16   2.7e-13       1      97 []     120     215 ..     120     215 .. 0.96

  Alignments for each domain:
  == domain 1  score: 50.4 bits;  conditional E-value: 2.4e-16
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT.TEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHHE CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl.nvefvqgdaedlpfedgsfDlvvssgalhhlsdedlekalkeiarvL 93 
                      +LdlGcG G  +l++a+ +++++++++  s+++  ++ + a+e++l n+++++g++ d++fe++ fD vvs+  ++h++  ++e +++++ r+L
       KHJ30638.1 120 ILDLGCGWGSGALYFAEIFPNSEIVAFSNSKTQKIYIDSIAKEKDLkNLRVITGNVVDYEFEKEYFDRVVSIELFEHMK--NYELLMAKVERAL 211
                      8******************99************99999999999999************************988***87..78899******** PP

                      EEEE CS
  Methyltransf_25  94 kpgG 97 
                      kpgG
       KHJ30638.1 212 KPGG 215
                      ***9 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0   1.1e-15   1.2e-12       2     110 ..     115     220 ..     114     257 .. 0.94

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 1.1e-15
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldnveFeqgdieeleklledekfDlilsnevlnaladpdkile 95 
                      ++g+++lDlGCG G  ++ +a e++p++e+v + +s++   +  ++a+++ l+n+++  g++ + e  +e+e fD ++s e++ ++++ +  + 
       KHJ30638.1 115 KDGMTILDLGCGWGSGALYFA-EIFPNSEIVAFSNSKTQKIYIDSIAKEKDLKNLRVITGNVVDYE--FEKEYFDRVVSIELFEHMKNYELLMA 205
                      789******************.****************9999999*********************..************************** PP

  Methyltransf_31  96 eiervlkpggillie 110
                      ++er+lkpgg l i 
       KHJ30638.1 206 KVERALKPGGKLFIH 220
                      ***********9876 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   0.0   1.5e-14   1.7e-11      19     133 ..     111     234 ..      90     279 .. 0.68

  Alignments for each domain:
  == domain 1  score: 44.3 bits;  conditional E-value: 1.5e-14
  Methyltransf_23  19 k..lraggrvLdiGcGtGillevlrengfsvtgvDlspeaveiae...........kakkaqkdqfdeq.......eaaepqgkfdlIvlrevl 92 
                      k  l+ g+ +Ld+GcG G+ + +++e + + + v  s  + +++            +                   + ++++++fd +v++e++
       KHJ30638.1 111 KagLKDGMTILDLGCGWGSGALYFAEIFPNSEIVAFSNSKTQKIYidsiakekdlkNL----------RvitgnvvDYEFEKEYFDRVVSIELF 194
                      23388999*******************9966666666555555534444444433211..........012222224455777*********** PP

  Methyltransf_23  93 ehvpdppellrqiatllkpgGylllseplaslkedrllldw 133
                      eh+++++ l++++ + lkpgG l+++ ++    +  +++d 
       KHJ30638.1 195 EHMKNYELLMAKVERALKPGGKLFIHIFAHA-TSPYDFEDG 234
                      ***************************9543.344444443 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.0   1.6e-13   1.7e-10       1      99 []     121     217 ..     121     217 .. 0.79

  Alignments for each domain:
  == domain 1  score: 41.5 bits;  conditional E-value: 1.6e-13
  Methyltransf_12   1 LeiGcGtGsllralleklpdieyt.gvDispsaiedakeklakre.nnnnnnvelealdlldldggssfDlvvasnvlhhlkdirevldnirkl 92 
                      L++GcG Gs + +++e +p++e++ ++   ++ i      +ak++  +n  +++ ++ d   ++++++fD vv++++++h+k+ + +++++ ++
       KHJ30638.1 121 LDLGCGWGSGALYFAEIFPNSEIVaFSNSKTQKI--YIDSIAKEKdLKNLRVITGNVVDY--EFEKEYFDRVVSIELFEHMKNYELLMAKVERA 210
                      8***********************9999999999..444444444033334444444443..33447*************************** PP

  Methyltransf_12  93 LkpgGrl 99 
                      LkpgG+l
       KHJ30638.1 211 LKPGGKL 217
                      *****97 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   4.8e-09   5.4e-06      31     142 ..     116     224 ..     100     240 .. 0.77

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 4.8e-09
                 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBH.HHHHHHHHHHHHTTGC.EEEEE-STTT.TSTTS-EEEEEE---STTTCHCHHHHHHHHHHHHH CS
         MTS  31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvda.rAlesakenleankle.vevvasdvle.eveekkfdlivsNPPfhagkatelavaeeliaeAk 126
                    ++lDlGcG+G  ++ +a+  p+ e++++ +++ + + +    +++++l+ ++v++ +v++ e+e++ fd +vs   f + k+      e l+a+ +
  KHJ30638.1 116 DGMTILDLGCGWGSGALYFAEIFPNSEIVAFSNSKtQKIYID-SIAKEKDLKnLRVITGNVVDyEFEKEYFDRVVSIELFEHMKN-----YELLMAKVE 208
                 45579**********************666655550555555.5555555555999999998747788999*****888877777.....8889999** PP

                 HHEEEEEEEEEEEETT CS
         MTS 127 eaLkegGeLliVanrk 142
                 +aLk+gG+L+i +  +
  KHJ30638.1 209 RALKPGGKLFIHIFAH 224
                 *********9865554 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.4   1.5e+03      24      45 ..      14      35 ..       5      46 .. 0.84
   2 !   24.9   0.0   9.8e-09   1.1e-05      43     160 ..     112     228 ..     104     253 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.4
                     HHHHHTTTHHHHHHHHHHH--S CS
  Ubie_methyltran 24 ndvlslgihrlWkkfveklvav 45
                     n+v+ lgi r  k+ ve+++a+
       KHJ30638.1 14 NAVIRLGIRRQLKERVEQIKAN 35
                     8999999999999999988765 PP

  == domain 2  score: 24.9 bits;  conditional E-value: 9.8e-09
                      --S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSSTEEEEE--TTT-TTS-T-EEEEEEES-G.GG-S-HHHH CS
  Ubie_methyltran  43 vavkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegkinieflqanaeeLpfeddsfDvvtvsfGl.rnvtDklka 135
                       + k g ++lD+ +G g  a+ +++   ++  v   + + + +      +ke+  +n++ +++n  + +fe++ fD v vs  l   + +++  
       KHJ30638.1 112 AGLKDGMTILDLGCGWGSGALYFAEIFPNSEIVAFSNSKTQKI-YIDSIAKEKDLKNLRVITGNVVDYEFEKEYFDRV-VSIELfEHMKNYELL 203
                      57799******************99887766555554444444.446778999999********************87.555551678899999 PP

                      HHHHHHHEEEEEEEEEEEE----SH CS
  Ubie_methyltran 136 LkeayrvlkpGGrlvvlefskvelp 160
                      + ++ r lkpGG+l++  f++ + p
       KHJ30638.1 204 MAKVERALKPGGKLFIHIFAHATSP 228
                      99*************9999888765 PP

>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   1.5e-07   0.00017       3      76 ..     118     188 ..     116     194 .. 0.88
   2 ?   -0.5   0.0      0.67   7.5e+02      97     115 ..     201     219 ..     196     221 .. 0.86

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 1.5e-07
                     EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTSSEEEEES-CCCHHHHCS-TTSEEEE CS
  Methyltransf_4   3 pvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelkNlrilrgdalkvllelledgsleki 76 
                      ++l++GcG G+  +  A+ +P+ ++++   +++   ++ + +++++lkNlr++ g+ +      +e+++++++
      KHJ30638.1 118 MTILDLGCGWGSGALYFAEIFPNSEIVAFSNSKTQKIYIDSIAKEKDLKNLRVITGNVV---DYEFEKEYFDRV 188
                     5789*****************************************************74...445666666555 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.67
                     HHHHHHHHHHEEEEEEEEE CS
  Methyltransf_4  97 pellkelarvLkkgGvlel 115
                     + l+++++r+Lk+gG l +
      KHJ30638.1 201 ELLMAKVERALKPGGKLFI 219
                     568899*********9975 PP

>> TehB  Tellurite resistance protein TehB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   7.7e-08   8.6e-05      32     132 ..     118     219 ..     100     239 .. 0.80

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 7.7e-08
                 -EEEEES-TTSHHHHHHHHT..T-EEEEEES-HHHHHHHHHHHHHTT-TTEEEEE--GGG----S-E.EEEEEESSGGGS-GGGHHHHHHHHHHTEEEE CS
        TehB  32 gkvldlgcgqgrnslylsll..gydvtawdknensiafleeikekenlknistalydineakldery.dfilstvvlmfleaeripsiienmqectkvg 127
                   +ldlgcg g  +ly++ +    ++ a+ + ++   ++++i++ ++lkn++  + ++ + +++++y d ++s  +  f + +    +++ +++  k+g
  KHJ30638.1 118 MTILDLGCGWGSGALYFAEIfpNSEIVAFSNSKTQKIYIDSIAKEKDLKNLRVITGNVVDYEFEKEYfDRVVSIEL--FEHMKNYELLMAKVERALKPG 214
                 4689*************976225678899988888899*************************9887588888655..556666778999999999999 PP

                 EEEEE CS
        TehB 128 gynli 132
                 g  +i
  KHJ30638.1 215 GKLFI 219
                 97554 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   2.4e-06    0.0027      62     131 ..     102     173 ..      88     224 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 2.4e-06
                 HHHHHHHTT...--TT-EEEEES-TTSHHHHHHHHHHCTTC.EEEEEESBHHHHHHHHHHHHHCTTCSEEEEES CS
        PCMT  62 valalelle...lkkgarvLevGsGsGyltavlarlvgekg.rvvsierikelveeakrnlkkldlenvivvvg 131
                 +a++  +++   lk+g+ +L++G+G G  +  +a+++ ++   + s  ++++++ ++ +  k++dl+n+ v++g
  KHJ30638.1 102 IAMLESYVQkagLKDGMTILDLGCGWGSGALYFAEIFPNSEiVAFSNSKTQKIYIDSIA--KEKDLKNLRVITG 173
                 567777887788************************98765133455666777777765..5666667766666 PP

>> DUF938  Protein of unknown function (DUF938)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   1.5e-06    0.0017      16     139 ..     103     219 ..      93     227 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 1.5e-06
      DUF938  16 evLksylaktte....rvLEiasGtGqHAvffApalpnlkwqpsdqdeelresiaawadelalsnlkpPleldvtaevapvereappapasidailsin 110
                 ++L+sy++k++      +L+++ G G  A +fA+ +pn +  +  + ++++  i   a+e  l+nl+      +t +v ++e     +++ +d ++si 
  KHJ30638.1 103 AMLESYVQKAGLkdgmTILDLGCGWGSGALYFAEIFPNSEIVAFSNSKTQKIYIDSIAKEKDLKNLRV-----ITGNVVDYE----FEKEYFDRVVSIE 192
                 56777777766545558**********************99998888888888999999999999986.....555555555....2466778888887 PP

      DUF938 111 llHispwsaveglfagagellkkkavlvi 139
                 l+  +  +  e l+a +++ lk+++ l+i
  KHJ30638.1 193 LFEHM--KNYELLMAKVERALKPGGKLFI 219
                 76443..3455677777777777777776 PP

>> GidB  rRNA small subunit methyltransferase G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.6   1.8e+03      77      88 ..      37      48 ..      11      67 .. 0.55
   2 !   15.3   0.0   8.6e-06    0.0097      45     143 ..     114     216 ..      99     223 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.6
                EEES-HHHHHHH CS
        GidB 77 LleslekkiaFL 88
                L ++ ekk++F 
  KHJ30638.1 37 LEDAYEKKMKFV 48
                223333444443 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 8.6e-06
                 S-CCC-.EEEETSTTTTTHHHHHHH-TTSEEEEEES-HHHHHHHHHHHHHCT-SSEEEEES-CCC.TTTTT-EEEEEEC-S.SSHHH...HHHHHCCCE CS
        GidB  45 lkekrdkviDvGsGaGlPGipLaiarpelkltLleslekkiaFLeevkeelklenveivearaee.kqeeekydvvtsRAl.aslne...lteillkll 138
                 lk+   +++D+G G G  ++  a ++p+ +++    ++ +  ++  + +e +l+n++++  ++ +   e+e +d v+s  l  ++++   l++ +++ l
  KHJ30638.1 114 LKDGM-TILDLGCGWGSGALYFAEIFPNSEIVAFSNSKTQKIYIDSIAKEKDLKNLRVITGNVVDyEFEKEYFDRVVSIELfEHMKNyelLMAKVERAL 211
                 33344.6***********************888877777778*********************994457778898886443133333111333344456 PP

                 EEEEE CS
        GidB 139 keggl 143
                 k+gg+
  KHJ30638.1 212 KPGGK 216
                 66665 PP

>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   8.9e-05       0.1      50     164 ..     104     219 ..      84     234 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 8.9e-05
                     HHHHHHHSS-GGG-SEEEEET-TTSHHHHHHHHH-TT-EEEEEE-HHHHHHHHHHS.-----TTEEEEES-TTTS-----SEEEEESS.GGGS-H CS
  Methyltransf_2  50 vakkvleafdleglkslvDvGGGtGalakaivsayPtikvivfDlpeVveaAkehl.sageeervefvgGdffkdslPeaDaillkrv.lhDwsd 142
                     + ++ +++  l+   +++D+G G G  a   ++ +P+ +++ f  ++  +   + + + +  ++++++ G++ + +  +     ++++ l+++  
      KHJ30638.1 104 MLESYVQKAGLKDGMTILDLGCGWGSGALYFAEIFPNSEIVAFSNSKTQKIYIDSIaKEKDLKNLRVITGNVVDYEFEKEYFDRVVSIeLFEHM- 197
                     5566667777888899***************************999887777666645566789999****99888886655444555367765. PP

                     HHHHHHHHHHHHH--TT-EEEE CS
  Methyltransf_2 143 ekcvklLkrvkkalpagGkviv 164
                     ++   l+++v++al++gGk+ +
      KHJ30638.1 198 KNYELLMAKVERALKPGGKLFI 219
                     456788899*********9876 PP

>> Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   8.9e-05       0.1       7      83 ..     115     188 ..     110     190 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 8.9e-05
                      -TT-EEEESS-TTSHHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CTCCHHHHCC..EEEE CS
  Methyltr_RsmB-F   7 qeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDri 83 
                      +++ tilDl ++ G+   + ae+  +++++vA  ++k+    + +  k   ++n+ v+++ +  +     +e fDr+
       KHJ30638.1 115 KDGMTILDLGCGWGSGALYFAEI-FPNSEIVAFSNSKTQKIYIDSIAKEKDLKNLRVITGNVVDY--EFEKEYFDRV 188
                      67889******************.5667899*****9999999999999**********999888..566679**98 PP

>> Methyltransf_17  S-adenosyl-L-methionine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00023      0.25      13      75 ..     100     165 ..      96     191 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00023
                      HHHHHHHHHHHHTTT--S.-EEEE--TTSHHHHHHHHH--SS-EEEEE..SS--S-GGG---GGGE CS
  Methyltransf_17  13 aqrdiLnhvaaevadieG.pvlelGLGnGRtydhlrellperriivfd..ralaahpssvPeeedl 75 
                      a +++L+   ++    +G  +l+lG G G    ++ e++p+ +i++f   ++ + + +s+ +e+dl
       KHJ30638.1 100 AEIAMLESYVQKAGLKDGmTILDLGCGWGSGALYFAEIFPNSEIVAFSnsKTQKIYIDSIAKEKDL 165
                      567889999999999998469**************************7224567899999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       802  (0.044732); expected 358.6 (0.02)
Passed bias filter:                      612  (0.0341346); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 2497.55
//
Query:       KHJ30639.1  [L=538]
Description: putative serine threonine-protein kinase bur-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-66  223.3   0.0    4.2e-66  223.0   0.0    1.1  1  Pkinase         Protein kinase domain
    9.8e-29  100.4   0.0    1.4e-28   99.9   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
     0.0011   18.0   0.0     0.0016   17.5   0.0    1.2  1  Haspin_kinase   Haspin like kinase domain
     0.0059   15.9   0.0      0.017   14.4   0.0    1.9  1  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.025   13.4   0.0      0.046   12.5   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.0   0.0   1.2e-69   4.2e-66       1     264 []      37     342 ..      37     342 .. 0.95

  Alignments for each domain:
  == domain 1  score: 223.0 bits;  conditional E-value: 1.2e-69
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE..........SSEEEEEEE--TTEBHHHHH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee..........kdelylvleyveggeladll 89 
                 ye+l klGeG+fG+V +a++k+tg ivA+Kki  +++k+    ++lrEik+lk l+hpn++rl e+  e             +y+v+ y++++ la ll
  KHJ30639.1  37 YEQLGKLGEGTFGEVHRARSKKTGAIVALKKILMHHEKDGFPITALREIKLLKLLSHPNVLRLEEMAIEhhkktsdkkkRAVIYMVTPYMDHD-LAGLL 134
                 78999*************************************************************99999*****98778899*******77.99999 PP

                 H.HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS............BCTTTSCGGGS-HHHH.TTSCB CS
     Pkinase  90 e.rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk............ltsfvgtseYlAPEvl.keney 174
                 e  + +++e ++k ++ q+legl+ylH+++i+HrD+K +N+Li++kg l+i+DFGla+++++  +            +t  v+t++Y++PE+l + ++y
  KHJ30639.1 135 EnPSIIFTEPQIKCYLMQLLEGLKYLHNNHILHRDMKAANLLINNKGILQIADFGLARHYDEPVPvagggggeahrdYTVLVVTRWYRPPELLlQLRKY 233
                 955666*********************************************************99****************************999*** PP

                 SHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS.........................-HHHHHHHHHHT-S CS
     Pkinase 175 skkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilg.etkeklpeasei.........................seeakdllkkllkk 247
                 ++++D+W++G+++ e+l gkp+++ge+       +++ql+ i++++g +t+e++p+++++                          + a++llk+llk 
  KHJ30639.1 234 TTAIDLWGVGCVFGEMLIGKPILAGES-------DANQLKIIFDLVGtPTNENMPNWRSLpgaelynvsslpqttgtlsqnfrtyGSGAISLLKELLKL 325
                 ************************333.......66677778888887999**********************************9************* PP

                 SGCCSTTHHHHHTSGGG CS
     Pkinase 248 dpkkRltaeellqhpyl 264
                 d +kR+ a ++l+hpy+
  KHJ30639.1 326 DWRKRINAIDALNHPYF 342
                 ****************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.9   0.0   3.8e-32   1.4e-28       5     206 ..      41     256 ..      37     283 .. 0.82

  Alignments for each domain:
  == domain 1  score: 99.9 bits;  conditional E-value: 3.8e-32
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH.HHHHHHHHHHHHTS-BTTB--EEEEEESSSS..........EEEEEE--TTEBHHHH CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlkeeateee.keelleeakimkklkhpnivkllgvctkeep..........llivteyvkgGdLlkf 91 
                   klGeG+fG+V++++ k    k+   Va+K++  +++++      l+e+k++k l+hpn+++l  + +++++          +++vt y+++ dL   
   KHJ30639.1  41 GKLGEGTFGEVHRARSK----KTGAIVALKKILMHHEKDGfPITALREIKLLKLLSHPNVLRLEEMAIEHHKktsdkkkravIYMVTPYMDH-DLAGL 133
                  58*************99....89999****9977777766578999******************999944434567778899********98.9**** PP

                  HHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE........EETTSSTSGGGGS.-HHHHHH. CS
  Pkinase_Tyr  92 LrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey........vkkeeaklpvkWm.apEslke. 179
                  L++  +  +t  ++ ++ +q+ +G++yL++++++Hrd+ a N L++++ + +i+DfGLar+  +            +++ +  +  +W+ +pE l + 
   KHJ30639.1 134 LENP-SIIFTEPQIKCYLMQLLEGLKYLHNNHILHRDMKAANLLINNKGILQIADFGLARHYDEPVPVagggggeaHRDYTVLVVTRWYrPPELLLQl 230
                  **99.9******************************************************99443322344444324555556778998789987551 PP

                  SEEEHHHHHHHHHHHHHHHHTTSSGTT CS
  Pkinase_Tyr 180 kkftsksDvWsfGvllwEiftlgespy 206
                  +k+t++ D W  G +  E++  g+  +
   KHJ30639.1 231 RKYTTAIDLWGVGCVFGEMLI-GKPIL 256
                  67****************987.65555 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   4.5e-07    0.0016     101     257 ..      36     194 ..       3     201 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 4.5e-07
  Haspin_kinase 101 dlasllndseklssevyqtkekdk..evvlKviplevledvtiskelslkelkslklvkgtypglllllqdkvlkekpdfyseqqlflvlllkdkG 194
                    ++++l + +e+ ++ev+++++k++   v+lK+i +   ++     ++ l e k lkl+    p++l l +  + ++k  + ++++ +++++  ++ 
     KHJ30639.1  36 NYEQLGKLGEGTFGEVHRARSKKTgaIVALKKILM--HHEKDGFPITALREIKLLKLLSH--PNVLRLEEMAIEHHKKTSDKKKRAVIYMVTPYMD 127
                    444555669***********965511577999999..56666667789999999999974..6999999999999998889999999999999999 PP

  Haspin_kinase 195 tdLeev.....klkswkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsRle 257
                    +dL+ +      + +  q++  + q ++ L+   ++ +  HRd++  n L+++++   + d+ l+R  
     KHJ30639.1 128 HDLAGLlenpsIIFTEPQIKCYLMQLLEGLKYLHNN-HILHRDMKAANLLINNKGILQIADFGLARHY 194
                    999887654433445679999999999999999877.567**************************86 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   4.8e-06     0.017     148     239 ..     149     245 ..      41     250 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 4.8e-06
  Kinase-like 148 llTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve..............kgfaPpEllgsrggytrknktkmthkl 231
                  +l +ql+    +L+++ ++h ++++ nll ++kg l + +f+  + + + v+++                 + + PpEll +          k+t ++
   KHJ30639.1 149 YL-MQLLEGLKYLHNNHILHRDMKAANLLINNKGILQIADFGLARHYDEPVPVAGGGggeahrdytvlvvtRWYRPPELLLQ--------LRKYTTAI 237
                  55.67888889*******************************9999*99999877667888899999998888999999988........34689999 PP

  Kinase-like 232 daWqlGlv 239
                  d W++G v
   KHJ30639.1 238 DLWGVGCV 245
                  99*99987 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.3e-05     0.046     312     362 ..     150     194 ..     142     209 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.3e-05
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakel 362
                     l + ++g++ L+ +  iLHrD  + N+li++     +    ++D+ la ++
      KHJ30639.1 150 LMQLLEGLKYLH-NNHILHRDMKAANLLINN-----KGILQIADFGLARHY 194
                     6677899*****.****************93.....233334566555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (538 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3734.44
//
Query:       KHJ30640.1  [L=471]
Description: putative transcription factor c2h2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.2e-61  205.2   0.4    1.1e-59  201.5   0.0    2.0  2  Peptidase_C78  Peptidase family C78
     0.0058   16.9   0.1     0.0058   16.9   0.1    1.9  2  zf-Di19        Drought induced 19 protein (Di19), zinc-bindin
  ------ inclusion threshold ------
       0.01   15.2   3.8      0.012   15.0   2.7    1.5  2  DUF4650        Domain of unknown function (DUF4650)


Domain annotation for each model (and alignments):
>> Peptidase_C78  Peptidase family C78
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.2     0.022   1.3e+02     101     192 ..      54     147 ..      44     172 .. 0.60
   2 !  201.5   0.0   1.9e-63   1.1e-59       3     212 .]     236     456 ..     234     456 .. 0.94

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.022
                    --EEEEEEESSHHHH...HHTHHHHHHHHH...........HT---EEEE..ET...EEEEEEEEE-TTS-EEEEEE--S--SSS-.HHHHHCSTT CS
  Peptidase_C78 101 gikckivdfkstgeleahaelleevanyFe.sleesskvlqtnlppiylqhqgh...srtivGveirkngelnlLvlDPhftgaeeikklvekkga 192
                    ++++++++ ++ +e  ++a +lee a+y e s+e+++  + +++  i +    +     +iv  + ++++  + +v+ P++ +++  +++  ++++
     KHJ30640.1  54 NVDFELISSSNVSEA-KNALYLEEEASYLEfSQENKNAIKSSEKNKIDVNSTNEsfhTNIIVPTKSHDEE-QEEIVFKPRCMRNRRLNNKTIQTNT 147
                    455555555666665.666777888888886555555556666666666655443326667777777664.588999**88888775544444442 PP

  == domain 2  score: 201.5 bits;  conditional E-value: 1.9e-63
                    EEE-SS--BE--TCSSS--TTTTHHHHHHHHHHHHHHHTTS-SS-.....---HHHHHHHHHHTTSSTGG.........GTTSS--B-HHHHHHHH CS
  Peptidase_C78   3 vsavlgsyevdhyqskledkGwgCgYRnlQmllSwlleskeeakevlfe.vptipeiQelleeawdkgfdsqgalelggivgsrkwIGttEaaall 97 
                     +a+++++ v+h +s+l+++ ++CgYRn+Qm+ S ++++++++ evl++ +p+i++iQ+++e awd gf+s+g++e++gi+g+rk+IGt Ea+a++
     KHJ30640.1 236 LYAYTCHPCVRH-VSRLKREDGFCGYRNIQMMTSFIVATNSQGCEVLGKkIPSIFDIQDFIEMAWDLGFNSHGRVETNGIRGTRKYIGTSEAQAMF 330
                    68999*******.********************************99999********************************************** PP

                    HHH--EEEEEEE..SSHHHH...HHTHHHHHHHHH............HT---EEEE..ETEEEEEEEEE-TTS-EEEEEE--S--SSS-.HHHHHC CS
  Peptidase_C78  98 rslgikckivdf..kstgeleahaelleevanyFe..sleesskvlqtnlppiylqhqghsrtivGveirkngelnlLvlDPhftgaeeikklvek 189
                      lgi+c+++ +   + +++ a++ ll + ++yF+  s++ + kv++t++ppiylqhqghs+tivG+e++ +g+ nl+v+DP++ ++ +i++lv++
     KHJ30640.1 331 CGLGIPCEVQGItkCKITNIPAYELLLTAAEDYFRnqSADLEFKVRCTSSPPIYLQHQGHSMTIVGFEKKIDGSRNLIVFDPRYFDSFKIMELVDR 426
                    ************6556778899*************98889999**********************************************9999988 PP

                    ST..TEEE.........EEGGGS-SSS-EEEE CS
  Peptidase_C78 190 kg..aesw.......lrrgaktlkkkkeyqll 212
                           +       +r+g ++lk++ke+++l
     KHJ30640.1 427 AAinM--RsenilgaYRKGISYLKRFKEFEIL 456
                    88441..35578899***************96 PP

>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.1   9.7e-07    0.0058       2      27 ..       6      32 ..       5      35 .. 0.90
   2 ?   -3.5   0.4       2.2   1.3e+04      17      41 ..     224     248 ..     214     250 .. 0.62

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 9.7e-07
     zf-Di19  2 sftCPyCgk.eltvkeLveHvedeHrv 27
                s+ CP+Cg  ++t+ e++ H+e+ H++
  KHJ30640.1  6 SIYCPFCGTeTYTDYEIMLHIETYHPE 32
                578*****977**************86 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.2
     zf-Di19  17 LveHvedeHrveskevvCPvCaekv 41 
                 L+ H+ +e +++   + C  C  +v
  KHJ30640.1 224 LLVHFLTEDKSTLYAYTCHPCVRHV 248
                 5666666666666667776666655 PP

>> DUF4650  Domain of unknown function (DUF4650)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   2.7     2e-06     0.012     402     484 ..      58     140 ..      54     146 .. 0.85
   2 ?   -2.3   0.0      0.34     2e+03     204     221 ..     152     169 ..     141     172 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2e-06
     DUF4650 402 ELLSPttvvsselsengEedlrYLemgdssipapvpselnsvpqn.thlsqdhnycsPvKknqlevqvdsltnnacvktlnles 484
                 EL S+++v  + ++   Ee+  YLe  +++ +a  +se+n++  n t+ s   n ++P+K +  e+  + + +  c++   l++
  KHJ30640.1  58 ELISSSNVSEAKNALYLEEEASYLEFSQENKNAIKSSEKNKIDVNsTNESFHTNIIVPTKSHDEEQ-EEIVFKPRCMRNRRLNN 140
                 9***************************999999999999976551556667799***99887666.59999999999877765 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.34
     DUF4650 204 ekvtdlqpsvkgAsnFgG 221
                 e+ +++++sv+gAs+F G
  KHJ30640.1 152 ETRSNSESSVRGASKFLG 169
                 467889999*****9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (471 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       856  (0.0477439); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 3486.43
//
Query:       KHJ30641.1  [L=627]
Description: putative myb dna-binding domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (627 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2771  (0.154554); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.86u 0.33s 00:00:01.19 Elapsed: 00:00:00.48
# Mc/sec: 3941.62
//
Query:       KHJ30642.1  [L=247]
Description: putative ammecr1 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-42  144.8   0.0    2.1e-42  144.6   0.0    1.1  1  AMMECR1   AMMECR1


Domain annotation for each model (and alignments):
>> AMMECR1  AMMECR1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.6   0.0   1.2e-46   2.1e-42       2     165 ..       8     214 ..       7     215 .. 0.84

  Alignments for each domain:
  == domain 1  score: 144.6 bits;  conditional E-value: 1.2e-46
                 HHHHHHHHHHTTSS-S-H.H---H.HHHS.............................EEEEEEEEE......EE....CCECCCECEEEEEEHHHHHH CS
     AMMECR1   2 klareaieealkeekkle.eeake.elke.............................kaglFVtlk......ekkg..eLRGCiGtleperpLaeeva 61 
                  +++e+++++++++++l+ +e +e ++ e                             +a++FVt++      +  +  +LRGCiGt+e + pL e+++
  KHJ30642.1   8 VHCFETLAATFEKREPLSlQEIEEsWI-EylhapntesskskflsaraaipslqasvpNAPIFVTWDiispldS--NklSLRGCIGTFE-SSPLDESLS 102
                 689999999999999988733333222.236667788888999999999999999**99********7665432..167**********.9******** PP

                 HHHHHHHHT-TTS----HHHHTTEEEEEEEE---EE--.GGG--TTT-EEEEE.ET...TEEEEE-THHHHHTT--HHHHHHHHHHHHTS-TTC..CC. CS
     AMMECR1  62 enAlaaAfeDpRFspvtaeElpeleveVsvLtepepiv.ledlevgkhGliie.kg...srsatlLPqvaveqgwdkeeflasllrKaglrpde..wk. 152
                 ++Al++A++DpRF+p++ +Elp+l+v+V++L+++e ++ + d+ +g+hG+ ++ +    s ++ +LP+vaveqgwd+e+ + ++++K+g+++++  w+ 
  KHJ30642.1 103 NYALTSALHDPRFPPIALHELPNLSVSVTLLHDFETCNdPMDWVLGRHGIRVHvRAkkkSWNSCYLPDVAVEQGWDQEQCVFNCMQKSGWDGTKltWRt 201
                 *************************************55778**********96633458899*****************************6545541 PP

                 STTSEEEEE-EEE CS
     AMMECR1 153 dseikltryevek 165
                  +eik+ r++++k
  KHJ30642.1 202 VDEIKVIRFQGSK 214
                 479*******987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1905.91
//
Query:       KHJ30643.1  [L=403]
Description: putative zip zinc transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-36  126.7  17.5    3.9e-26   92.1   9.5    3.0  2  Zip           ZIP Zinc transporter
  ------ inclusion threshold ------
      0.098   12.4   0.4       0.19   11.5   0.4    1.4  1  Trp_oprn_chp  Tryptophan-associated transmembrane protein (Tr


Domain annotation for each model (and alignments):
>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   1.0   5.7e-12   5.1e-08       2      74 ..       6      73 ..       5      92 .. 0.88
   2 !   92.1   9.5   4.3e-30   3.9e-26     177     331 ..     219     396 ..     138     398 .. 0.75

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 5.7e-12
         Zip  2 llkilaiiaililsllgllgpllvpkiskllsklllslllafavGvllgtaflhLlPealealeesqleeeht 74
                +l +++ii+++++s+l++ +pl ++     ls++ +++++ f++G+l+gt+++ ++Pe++e++++ ++ e+ +
  KHJ30643.1  6 ILLLTLIIVMTVTSFLAGALPLSLS-----LSSSQMRIISNFGMGILVGTSLIVIIPEGIESIYSAKSIEREH 73
                67899********************.....89999*****************************998877533 PP

  == domain 2  score: 92.1 bits;  conditional E-value: 4.3e-30
         Zip 177 eklaslkvraiilllglilHsfidGLAlG...vssssstgislfiAvllHelpeelglgaiLlkaglsrkkavllnllfaltaplGiliGilvrs.... 268
                   ++  ++r+ + + gl++H ++dG+A+G   +ss+ + g+++f+A++lH++p ++gl++iLlk gls++ +  + ++f+l++p+G++ ++++++    
  KHJ30643.1 219 LTPTPKQTRSVTTTTGLVIHALSDGIAIGasiTSSNIKLGLIIFLAIMLHKAPTAFGLTSILLKQGLSKRAIRAHLMIFSLATPAGAATTWVLIAilga 317
                 3344557899********************************************************************************999999887 PP

         Zip 269 .isessgaeivsgillalsaGtflYvalvellphEllnek................gssslkqsllqllglllGfalmll 331
                  + e+   ++  gi l +saGtflYv+   +   E +++                   +  k++l   l+ ++G++++l+
  KHJ30643.1 318 sQIEEESGQWWVGISLLFSAGTFLYVSIHAVHQ-ENSSNYshiasngvleagintvPRKVSKLQLRDTLAAVCGMLVPLV 396
                 756678889999******************997.7666666788888999999999778889999999999999999887 PP

>> Trp_oprn_chp  Tryptophan-associated transmembrane protein (Trp_oprn_chp)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.4   2.1e-05      0.19      41     131 ..     300     392 ..     295     401 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.1e-05
  Trp_oprn_chp  41 wapaltalAlvllAaavAvlavrglgrrvvgvllalagagaavaalslltdpadaaraaaaaatgvasaaaave..ltawpvlalaggvllll 131
                   ++pa +a  +vl+A + A  +    g + vg+ l+ ++ + ++ +++++ +++++++++ a+ ++++++ ++v   +++  +   +++v+ +l
    KHJ30643.1 300 ATPAGAATTWVLIAILGASQIEEESGQWWVGISLLFSAGTFLYVSIHAVHQENSSNYSHIASNGVLEAGINTVPrkVSKLQLRDTLAAVCGML 392
                   78999**************************************************99999888888888887776666655555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       814  (0.0454013); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2827.53
//
Query:       KHJ30644.1  [L=477]
Description: putative histone acetyltransferase type b catalytic subunit protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.5e-42  144.0   0.0    1.1e-41  142.8   0.0    1.6  1  Hat1_N           Histone acetyl transferase HAT1 N-terminus
  ------ inclusion threshold ------
      0.028   14.6   0.0      0.065   13.5   0.0    1.5  1  Acetyltransf_1   Acetyltransferase (GNAT) family
        0.2   11.6   0.0       0.45   10.5   0.0    1.5  1  Acetyltransf_10  Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Hat1_N  Histone acetyl transferase HAT1 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.8   0.0   1.8e-45   1.1e-41       1     160 []       8     165 ..       8     165 .. 0.95

  Alignments for each domain:
  == domain 1  score: 142.8 bits;  conditional E-value: 1.8e-45
                 GEEEHHHHEEEEEESSS.EEE.........E--S--HHHHTTTTEEESEES-EEEEEEETTT--EEEEEE-SEE--.STTS-..-HHHHHHTTS-T..E CS
      Hat1_N   1 wtvdanealkiklvrseedleeeektksesfhPeftyqiFgeeetIfGYkdLkInlyfaagslkpylkvsyseklkdkskte.kdvekklkeflpeeaf 98 
                 w++++n+a++++lv +++       +  ++f+P++t ++Fge+e I GY++L+Inl+f+a++++p lk+s+s+++k++s+ + +d++++++++lp + f
  KHJ30644.1   8 WSTNSNNAIQVSLVIPDKGG----PKAIHTFKPKMTAPLFGEDEIISGYQGLRINLRFHACDMRPGLKISFSKRMKPDSEYSpTDLKEIFENYLPRSSF 102
                 99**************7663....345569**********************************************99999888*************** PP

                 S-HHHHHHHHH.HHH.H--GGSEEEEEETTEE..EEEEEEESSSHHHHHHHHHHTHHHHHHST CS
      Hat1_N  99 kskeeFekale.ekaksfkppGelihsytrekkefeiykasladpavrelhrrlqifvllFIE 160
                 ++   F++a++ ++ +++kppGel ++ ++ +++fe++k++lad  ++++++r+qi+v +FIE
  KHJ30644.1 103 EKSTVFDSAIQdQSFSNWKPPGELWKTIQSGNRTFEVWKGNLADLTIQQMLKRIQILVSFFIE 165
                 ***********99999*************99999****************************9 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.1e-05     0.065      63     107 ..     246     289 ..     231     292 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.1e-05
                     EEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTEHH CS
  Acetyltransf_1  63 ieslaVspeyrgkGlGsaLlealeerareegikkivlaveednda 107
                     i ++ V p ++gkG Gs  ++a+ ++ ++e  + i+++ve++n+a
      KHJ30644.1 246 ISQFIVLPPFQGKGNGSIFYNAIYDYYLKE-SRTIEITVEDPNEA 289
                     78999***********************99.6679*****99975 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   7.6e-05      0.45      49      97 ..     241     289 ..     235     291 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 7.6e-05
  Acetyltransf_10  49 rdgshisllfVdpeyrgqGigkaLleaveeeaekdgikl.eltvnaspya 97 
                        +s+is ++V p ++g+G g+   +a+ +++ k+ +++ e+tv+  ++a
       KHJ30644.1 241 PCRSRISQFIVLPPFQGKGNGSIFYNAIYDYYLKE-SRTiEITVEDPNEA 289
                      56889**************************9555.55559999876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3619.56
//
Query:       KHJ30645.1  [L=160]
Description: hypothetical protein EV44_g5480 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0032   17.1   0.0     0.0055   16.4   0.0    1.4  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type
  ------ inclusion threshold ------
       0.13   12.4   0.1       0.25   11.5   0.1    1.4  1  Axin_b-cat_bind  Axin beta-catenin binding domain


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   6.1e-07    0.0055       9      81 ..      81     153 ..      73     158 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 6.1e-07
  Retrotran_gag_2   9 lalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneL 81 
                      + ++++  +d+   l++e  t+ ++W+ L++ y k s+    ++ k+l ++++++g +++d  nkl++l +++
       KHJ30645.1  81 KFILLQGPEDDDQALLDEYVTSIKLWRYLQSKYRKPSKLAAEQYPKDLNDFEFTPGLTIRDAWNKLKDLRRKI 153
                      5566777788889999999************************************************998876 PP

>> Axin_b-cat_bind  Axin beta-catenin binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   2.8e-05      0.25       1      13 [.      89     101 ..      89     108 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.8e-05
  Axin_b-cat_bind   1 eDddqdILDdHvs 13 
                      eDddq+ LD++v 
       KHJ30645.1  89 EDDDQALLDEYVT 101
                      899********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1054  (0.0587874); expected 358.6 (0.02)
Passed bias filter:                      555  (0.0309554); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1310.94
//
Query:       KHJ30646.1  [L=199]
Description: putative succinate dehydrogenase membrane anchor subunit sdh4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-49  165.8   0.0    5.1e-49  165.4   0.0    1.2  1  CybS      CybS, succinate dehydrogenase cytochrome B small su


Domain annotation for each model (and alignments):
>> CybS  CybS, succinate dehydrogenase cytochrome B small subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.4   0.0   2.9e-53   5.1e-49       4     133 .]      69     198 ..      66     198 .. 0.98

  Alignments for each domain:
  == domain 1  score: 165.4 bits;  conditional E-value: 2.9e-53
        CybS   4 lklipqppggvsgtvndaakvpepsksegsyhwtleRivavglvpltvvplvagslspvlDavlavlllihshlgfesciiDYipkrvygklhklahyl 102
                  +++p+ p+ ++gt nd+a++p+p++++gsyhwt+eR++++gl+plt++p+++gsl+p++Da+l++++lihsh+gfe++i+DY+p+++++ ++k++ + 
  KHJ30646.1  69 NSILPPLPQVINGTANDPAPIPSPDPTHGSYHWTFERLISAGLIPLTIAPFTVGSLNPAMDAILCATILIHSHIGFEAVIVDYLPRNRVPNARKFFWWT 167
                 6789*********************************************************************************************** PP

        CybS 103 LalgtvlslvGlYeletednGltelvkklws 133
                 L+++tv+ +vGlYe+et+d+G+t ++ k+w+
  KHJ30646.1 168 LRAATVAVGVGLYEFETNDVGVTAAICKIWK 198
                 ******************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       300  (0.0167327); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.21s 00:00:00.57 Elapsed: 00:00:00.35
# Mc/sec: 1720.44
//
Query:       KHJ30647.1  [L=162]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       698  (0.0389313); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1238.61
//
Query:       KHJ30648.1  [L=373]
Description: putative lyso-phosphatidylcholine acyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-13   49.8   0.0      6e-13   48.6   0.0    1.6  1  Acyltransferase  Acyltransferase


Domain annotation for each model (and alignments):
>> Acyltransferase  Acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.6   0.0   3.3e-17     6e-13      12     134 ..      54     236 ..      40     237 .. 0.82

  Alignments for each domain:
  == domain 1  score: 48.6 bits;  conditional E-value: 3.3e-17
  Acyltransferase  12 e.......kgpailvaNHqsylDvlllwlllyksn.gp..rnvviiakkellsi.pllgflmrllgfifidR....ksnaraagsleniselle 90 
                      +       k+++++v+NH s +D++l+w +l  s+ ++  + ++ ++  ++++  +ll+ ++  +++ +  R    k  +  + +++++ +ll+
       KHJ30648.1  54 RrndiegrKRGLVTVSNHISVVDDPLIWGVLPFSHtFNpsNLRWSLGSYDICFKsRLLSAFFNFGQVLPTHRsthsKYGGLFQPTISQAIRLLS 147
                      3666777799*************************88898899999999**9999*****************6555333333555555555777 PP

  Acyltransferase  91 eg...........................................klvviFPEGtrsre..gellpfkkGlvrlaakakkgvpivPvai 134
                      ++                                            +v+iFPEG++ +   + l+ fk+G+ rl+++    + ++P+ i
       KHJ30648.1 148 AQpftppvdsnhlefydpfttgsmtytttgsdlfpspsyypsrkySWVHIFPEGRVHQHphRTLRYFKWGVSRLILESEPMPEVIPIFI 236
                      77888888888888888888888888888899999999999998788*******9988865666**************88888888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2873.24
//
Query:       KHJ30649.1  [L=938]
Description: hypothetical protein EV44_g2914 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-75  252.9   5.0    7.3e-75  252.1   5.0    1.4  1  RAI16-like  Retinoic acid induced 16-like protein


Domain annotation for each model (and alignments):
>> RAI16-like  Retinoic acid induced 16-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  252.1   5.0   4.1e-79   7.3e-75       1     356 [.      82     445 ..      82     449 .. 0.87

  Alignments for each domain:
  == domain 1  score: 252.1 bits;  conditional E-value: 4.1e-79
  RAI16-like   1 cleyllknkiletLctlgeadkpegvkkevlkfytkLlsklseplLphesvhrpllkLllsssgsst..sssdvekelvsLLetlcaklrkdpnLleff 97 
                 c+ ++ ++ki+ ++++++  +++eg+ +e + ++ +L+++++e+++++  + r+l+kLl++  g++    + d+e e+v+L + + +k+r dp +l+++
  KHJ30649.1  82 CISFASSEKIYVQIEKIAILSRNEGIIRESVAIFATLIESEEEDFVENHIFSRSLMKLLVQITGTNSirLGLDTEVEVVELAFNITTKIRLDPDILPAW 180
                 999*******************************************************999988877799***************************** PP

  RAI16-like  98 lenkskqqs.eesesatkesaaatekenfilfslLlgyvhseGrigerAreaLllllelaseeetaekpliestdlcpvlateLgalYslLpkkl...d 192
                 ++++s+++  e++   +++++++t+ke+f+lf+lL++y+h+eGrig++Ar++Ll+++e as++ ++e++++e +dl++++at+LgalYs+L++kl    
  KHJ30649.1 181 FASQSHNKIsEKEIGLSEKFTGKTHKEDFPLFYLLIDYIHHEGRIGDFARTGLLYIIEAASNSINLEQWIVE-SDLATLMATGLGALYSQLSRKLvidY 278
                 **999886525555668899****************************************************.*********************95550 PP

  RAI16-like 193 pl.....etiqssdwsidekistedl.atfpg..keaLesFlslleFcqslikeahs.eiaeallklieesFLadvLePsLletse...gssltvlayL 279
                        + +  sd+  +++i+++++ ++ +   + ++e+Fls l F+q++ ++++s ei+++ll++++  FL+++L+PsLle+s+   gss++vl+yL
  KHJ30649.1 279 -PdeelaPVLALSDY--QHPITSSEIvSSSSSefQLQIETFLSHLVFWQDVLNHCKSsEINQTLLEHFRVIFLQQLLYPSLLESSDldgGSSVAVLTYL 374
                 .05556555555555..344444433022222357899*****************9889**************************************** PP

  RAI16-like 280 krilrslespalleqvlsFLLgtetetetsrddedlplkttlierissksfelsistlrlfetllqlpdeniLynLv 356
                 +ril+ l++p++++ +l++LL+    ++ +   ++++++ +  +  ++ks++l +  ++++ ++ ++p   +L +L+
  KHJ30649.1 375 RRILEALDHPDMIHLILHYLLA---LPDSAP--SSSNTRASMSAARQRKSVDLATL-MASQVEVKPSPALYNLVDLI 445
                 *********************8...555555..56666677777777777887776.78888999999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (938 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       634  (0.0353617); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 6280.49
//
Query:       KHJ30650.1  [L=617]
Description: putative fggy-family carbohydrate kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-49  168.5   0.0      2e-49  168.1   0.0    1.2  1  FGGY_C        FGGY family of carbohydrate kinases, C-terminal
    2.8e-20   72.9   0.1      4e-19   69.1   0.1    2.6  1  FGGY_N        FGGY family of carbohydrate kinases, N-terminal
     0.0065   16.0   0.1       0.27   10.7   0.0    2.2  2  BcrAD_BadFG   BadF/BadG/BcrA/BcrD ATPase family
  ------ inclusion threshold ------
       0.16   11.8   0.0        0.3   11.0   0.0    1.4  1  Hexokinase_1  Hexokinase


Domain annotation for each model (and alignments):
>> FGGY_C  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.1   0.0   4.4e-53     2e-49       2     197 ..     335     545 ..     334     546 .. 0.87

  Alignments for each domain:
  == domain 1  score: 168.1 bits;  conditional E-value: 4.4e-53
      FGGY_C   2 kvslGTssflllvgtkpvisehglltpvagedgkpeyalegsiavagslvawlldnl.......glreeirdagev............eeslaelaaae 81 
                 + ++GTs+++l+++++p+ +++g+++p+++   ++ +++eg+++++g+l++++l+ +               ++              +       +++
  KHJ30650.1 335 ASVAGTSTCHLAISKDPI-FVDGVWGPYRDVLFPGMWLAEGGQSATGELLKHVLEIHpaynetiS------ISESFntsiydylnshlD-------EMR 419
                 689***************.**************************************85533332......333223466656633432.......333 PP

      FGGY_C  82 avada.......ggvvfvpafsglrapywdpdargtitglssstt...lahiarAaleavalqlrailealekdsgkpldrlavdGGgskndllmqllA 170
                 ++ +a       ++++f+ +++g+r+p++d+++ g+++gls +++   la  ++A++e++a+q+r+i+e+++k+ g+ +++++++G++++n+ lm+l+A
  KHJ30650.1 420 LKLKAptvsfigRNFFFYGDLWGNRSPIADSNMTGSVVGLSPDKSidgLAIYYYATMEFIAMQTRHIIETMNKS-GHSISSIFMSGSQCQNKILMELIA 517
                 333334456666***********************************************************999.************************ PP

      FGGY_C 171 dilgvpVerpkt.aeatalGaAilAava 197
                  ++gvpV++p++ ++a+++GaA+l+a a
  KHJ30650.1 518 TVCGVPVQIPRYvHAAVVHGAAMLGAKA 545
                 *************************988 PP

>> FGGY_N  FGGY family of carbohydrate kinases, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.1   0.1   8.9e-23     4e-19       2     245 .]      33     305 ..      32     305 .. 0.87

  Alignments for each domain:
  == domain 1  score: 69.1 bits;  conditional E-value: 8.9e-23
                 EEEEEEESSEEEEEEEETTS-EEEEEEEE--EB-SSTT--EE-HHHHHHHHHHHHHHHHHHCT.-GCCEEEEEEEE-SS-EEEEETTTEES........ CS
      FGGY_N   2 ilglDcGttstkaivldekgkvvasaqaelelsspkegwaeqdpeeiwqalaeairkvleqagisekqikaIgisgqreglvllDkndkpL........ 92 
                 ++g+D+Gt s +a ++d  g++ a  ++++ l +p+ g+ eq+  +iw +++ +++ +l+ ++i+++ i++Ig+ +    +v+    d+p+        
  KHJ30650.1  33 YIGIDVGTGSARACIIDCSGNIKALTTENIGLWTPQTGYYEQSTTNIWRSICTCVQRALSLHNIDPDTIRGIGFDATCSLAVFSHDTDEPItvtgpnft 131
                 89*************************************************************************999999999999999955555555 PP

                 .....SEEE-TT--TTHHHHHHHHHTTCHCCHHHHHSS-SSTTSHHHHHHHHHHHSCCHHCCHCEEEEHHHHHHHHHCT.--EEEHHHHCTTTSE.... CS
      FGGY_N  93 .....ynailwkdrrtaeiveklkeegnekklyektglvlstgftlsklkWlkenepevfekiekflliddyLiwrLtg.qfvtdvtnasesmlf.... 181
                      +n+ilw d+r +++ ek+++   +++l    g  +s    + k+ Wlk+n p  +    kf    d L++  tg +  +  + + + +++    
  KHJ30650.1 132 ndgndRNVILWLDHRPEKETEKINA--TNHNLLRYVGGKMSIEMEIPKILWLKNNMPPNLFDRCKFYDLTDALTHIATGnESRSYCSTVCKQGFVpvgv 228
                 5555559****************99..8999999999999****************9888888888889999*******85666667777777761111 PP

                 ETTTTEE-HHHHHHTT--GG.............GS-EEE-TCCEEEEEECCCCCCTT.S-EEEEEEEEEHHHHHHHH CS
      FGGY_N 182 nikklewdeellailgipee.............lLPklvesseiigelkpelaaklGlkegvpvvggggDqqaaalG 245
                 + + + w+e   +++g++               +  + ++++e +g l +++a++lGl +g+ + +g  D  a+ +G
  KHJ30650.1 229 DGSVKGWQEDFYKAIGLEDLvkdnfkrmggvdgVNGNFLSAGELTGRLCEKAATELGLPPGIAIGSGVIDAYAGWIG 305
                 556789*********99876666677666666666778999**************************9999998877 PP

>> BcrAD_BadFG  BadF/BadG/BcrA/BcrD ATPase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0     6e-05      0.27       1      65 [.      34     104 ..      34     125 .. 0.75
   2 ?    3.2   0.0     0.011        51     206     267 .]     486     542 ..     474     542 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 6e-05
                  EEEEE-SSEEEEEEEETTTEEEEEEEE--......TTS-HHH.........HHHHHHHHHHT--GGGECEE CS
  BcrAD_BadFG   1 vGiDgGsTttkavlmdekgevlgrgitns......anlesvrfeaaekvleealtealerageeeadieet 65 
                  +GiD+G+++ +a+++d++g++ + +  n       + + +  +++ ++++ + ++ al+    ++++i+ +
   KHJ30650.1  34 IGIDVGTGSARACIIDCSGNIKALTTENIglwtpqTGYYEQSTTNIWRSICTCVQRALSLHNIDPDTIRGI 104
                  7******************9543333332666666555556677788888888888887777777777765 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.011
                  HHHHHHTT---SS.EEEESGGGG-HHHHHHH.....HHHH-S-EE--GGGGGHHHHHHHHHH CS
  BcrAD_BadFG 206 vialisrsggvtdevtltGGvakneaavkelrklvkenygevkininpdsiytgalGAalfA 267
                  +i+++++sg     +++ G+  +n+ +++ +       + +v+++i+++   + + GAa+++
   KHJ30650.1 486 IIETMNKSGHSISSIFMSGSQCQNKILMELI-----ATVCGVPVQIPRYVHAAVVHGAAMLG 542
                  45556666666666**********5555444.....889999*****************985 PP

>> Hexokinase_1  Hexokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   6.7e-05       0.3      56     121 ..      32      99 ..      27     157 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 6.7e-05
                   EEEEEEESSSEEEEEEEEEESSS-EEEEEEE..EE--GGGGGSBHHHHHHHHHHHHHHHHHHH....S CS
  Hexokinase_1  56 tylAlDlGgtnlRvllveLlgeskveitqek..ykipeelktgtaeeLFdfiakciaefleeegeekk 121
                    y+ +D+G    R + ++ +g+ k  +t++   +  ++ + +++ ++++  i  c+++ l+ ++++ +
    KHJ30650.1  32 HYIGIDVGTGSARACIIDCSGNIKALTTENIglWTPQTGYYEQSTTNIWRSICTCVQRALSLHNIDPD 99 
                   699******************8888888888999999999999*****************99988753 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (617 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4294.20
//
Query:       KHJ30651.1  [L=851]
Description: putative rsc complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.9e-36  123.0   4.2    6.3e-18   64.6   1.0    2.9  2  Bromodomain     Bromodomain
    1.1e-16   60.8   1.2    1.1e-16   60.8   1.2    2.9  5  BAH             BAH domain
  ------ inclusion threshold ------
      0.095   11.8   5.8       0.21   10.7   5.8    1.6  1  Astro_capsid_p  Turkey astrovirus capsid protein
        1.3    7.0  12.1        2.1    6.4  12.1    1.2  1  DNA_pol_phi     DNA polymerase phi
        5.9    5.1  19.3     0.0045   15.4   7.5    1.6  2  CDC45           CDC45-like protein


Domain annotation for each model (and alignments):
>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.2   0.1   1.8e-19   6.5e-16      11      82 ..      63     134 ..      55     136 .. 0.95
   2 !   64.6   1.0   1.7e-21   6.3e-18      14      82 ..     273     341 ..     259     343 .. 0.94

  Alignments for each domain:
  == domain 1  score: 58.2 bits;  conditional E-value: 1.8e-19
                  TTCGGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHHH CS
  Bromodomain  11 hklaepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviyela 82 
                  h+ ++ F++ v+++ +p+y+++ik+P+ +stI+ k+ +++Y++++ f  d+ l+ +Na+ yn++ + +y++ 
   KHJ30651.1  63 HDVSKDFQRLVNKRILPEYFDIIKEPMAFSTIRGKVVKKQYQNFKSFVRDFALISHNAQVYNRPSALVYADS 134
                  8899**************************************************************999975 PP

  == domain 2  score: 64.6 bits;  conditional E-value: 1.7e-21
                  GGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHHH CS
  Bromodomain  14 aepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviyela 82 
                    pF++ +d+++ p+yy+ ik+P+ L  Ikkk++++kY s+++  +dl+l+f+Na+ yn+e+s++y++a
   KHJ30651.1 273 ILPFERLPDKTQMPEYYQEIKQPIALDLIKKKAKRKKYYSIDQTLKDLELMFENAKLYNREESQVYKDA 341
                  669****************************************************************98 PP

>> BAH  BAH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.66   2.4e+03      42      68 ..     119     144 ..     111     181 .. 0.81
   2 ?   -3.1   0.1       1.9   6.7e+03      42      71 ..     306     336 ..     300     362 .. 0.64
   3 !   60.8   1.2   2.9e-20   1.1e-16       4     122 .]     383     499 ..     381     499 .. 0.95
   4 ?   -4.1   0.0       3.9   1.4e+04      37      52 ..     510     525 ..     506     532 .. 0.72
   5 ?   -2.7   0.0       1.4     5e+03      48      68 ..     807     828 ..     751     830 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.66
                 EEEEEECGGGSTTTTHCCCTTEEEEEE CS
         BAH  42 lvdwflrpeetksalklrqkrElfltr 68 
                 +++ + rp++  +  + ++ rElf+++
  KHJ30651.1 119 NAQVYNRPSAL-VYADSVKLRELFVEE 144
                 68899999999.777777778999876 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.9
                 EEEEEECGGGS.TTTTHCCCTTEEEEEEEEE CS
         BAH  42 lvdwflrpeet.ksalklrqkrElfltrqse 71 
                 + + ++  ++t k+ + +++   l+  ++s+
  KHJ30651.1 306 KRKKYYSIDQTlKDLELMFENAKLYNREESQ 336
                 5556666677766666666666666544443 PP

  == domain 3  score: 60.8 bits;  conditional E-value: 2.9e-20
                 ETTGEEEEEETTSTTEEEEEEEEEEEEETTSTCEEEEEEEEEEECGGGS.TTTTHCCCTTEEEEEEEEEEEEGGGEEEEEEEEEHHHHCTECCHCHHCS CS
         BAH   4 avGdfVyfddtstdepyqirrIeeLkenakneeaeatvlvdwflrpeet.ksalklrqkrElfltrqseilplaairgkcrVvllsdleeaqnylpkkl 101
                 +vGd+V ++++++  ++ +++I + ++++  +   ++ +++w++rpe+t +  +k ++++E+  t q+ +++++++  +c V+ ++++++ +++    +
  KHJ30651.1 383 KVGDWVHLNNANDVTKPIVAQIYRTWQDPEGQ---KWINACWYYRPEQTvHNYEKHFYENEVVKTGQYRDHKIEEVVDRCFVMFFTRFNKGRPRGFPPD 478
                 69******************************...***********************************************************95457 PP

                 TTEEEEEEEEETTTTEEEE-S CS
         BAH 102 ddtFycslvydptaktfkkdk 122
                  ++++c+  y++++ +++k+k
  KHJ30651.1 479 REVYVCEARYNEEKFKLNKIK 499
                 789***********9998876 PP

  == domain 4  score: -4.1 bits;  conditional E-value: 3.9
                 EEEEEEEEEEECGGGS CS
         BAH  37 aeatvlvdwflrpeet 52 
                 +e+  ++d f++p+++
  KHJ30651.1 510 REKDYEMDLFATPKKM 525
                 5677788888888887 PP

  == domain 5  score: -2.7 bits;  conditional E-value: 1.4
                 CGGGS.TTTTHCCCTTEEEEEE CS
         BAH  48 rpeet.ksalklrqkrElfltr 68 
                   e++ ++++ +++k+El++t+
  KHJ30651.1 807 AAEKIeQQKRSALRKNELMATQ 828
                 3455566677777778888875 PP

>> Astro_capsid_p  Turkey astrovirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   5.8   5.9e-05      0.21     230     266 ..     168     204 ..      98     208 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 5.9e-05
                     ...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Astro_capsid_p 230 aeeeisdpsdeedeevsdeetdtevesdeDeddevdr 266
                     +e e s p+d +dee +dee++ + ++deDe+de d+
      KHJ30651.1 168 PEVEDSPPPDPNDEEQDDEEEEDDEDEDEDENDETDD 204
                     6778888899999889999999999999999999987 PP

>> DNA_pol_phi  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  12.1   0.00058       2.1     642     669 ..     180     222 ..     168     259 .. 0.51

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.00058
  DNA_pol_phi 642 dedeeddeeeeeeddeededseeddde...............e 669
                  de+++d+eee++ed++ede++e+dd+                +
   KHJ30651.1 180 DEEQDDEEEEDDEDEDEDENDETDDERnrrgrrkarrpssilK 222
                  2223333333333333333333222222333444444444440 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   7.5   1.2e-06    0.0045     132     196 ..     176     266 ..     152     337 .. 0.50
   2 ?   -5.9   3.9       3.4   1.2e+04     166     217 ..     791     841 ..     780     848 .. 0.36

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.2e-06
       CDC45 132 sd.eedeeeeeeddddeeeeeeeeedeedeeedeeeskkkrk......sksdeeee....sddddersrkrrrse.......................p 196
                  d +++e+++ee++dde+e+e+e+++++de ++  ++k   +      +           + ++d+++++++r +                       +
  KHJ30651.1 176 PDpNDEEQDDEEEEDDEDEDEDENDETDDERNRRGRRKA--RrpssilK------GikadDGNRDDPESQKKRGRppkvltpmearisallkglrkfkN 266
                 332122122222222222222222222222222222222..22233322......13333444444555555544445565555555555555555550 PP

  == domain 2  score: -5.9 bits;  conditional E-value: 3.4
       CDC45 166 eskkkrksksdeeee.sddddersrkrrrsepsakklrrqlkkerrkyeavle 217
                 e++kkrk+ ++ + e ++ ++ +++kr+  + +++ +  q  k+ +k +++l+
  KHJ30651.1 791 EDEKKRKA-HQLDLElHAAEKIEQQKRSALR-KNELMATQCVKAIEKWSSELR 841
                 12222221.1111112222222222222222.334444445555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (851 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1675  (0.0934241); expected 358.6 (0.02)
Passed bias filter:                      625  (0.0348597); expected 358.6 (0.02)
Passed Vit filter:                        89  (0.00496402); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.85u 0.31s 00:00:01.15 Elapsed: 00:00:00.46
# Mc/sec: 5582.16
//
Query:       KHJ30652.1  [L=370]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       750  (0.0418317); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2647.02
//
Query:       KHJ30653.1  [L=286]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.013   15.2   3.6       0.02   14.5   3.6    1.2  1  EVI2A            Ectropic viral integration site 2A protein (
       0.11   12.6   0.2       0.28   11.3   0.0    1.8  2  Tape_meas_lam_C  Lambda phage tail tape-measure protein (Tape


Domain annotation for each model (and alignments):
>> EVI2A  Ectropic viral integration site 2A protein (EVI2A)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   3.6   2.3e-06      0.02      34     142 ..      69     185 ..      54     188 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.3e-06
       EVI2A  34 vnetawdsiiqnktngrnksensntnpvtpevdkks.kstetletetsspsvslapkseeelttpsvvrnssst.....tqstentsksk..seifKke 124
                 +n ++w+  iq k + +n++ + n++++t++    + k+ ++   + + ++++l++  ++e t+p+++ +s++       + +++ s ++  +e++ +e
  KHJ30653.1  69 LNDSQWARPIQDKDSENNSQISRNLQSKTAARGAGQvKDLSKSIQQPNRSLPALSTRPNTEDTSPQTAYQSTEIdnarfEEVVGKMSVPQelQEMIEAE 167
                 68899********977777777777777777665443444444445577889999999999999997777765411111345566666653379***** PP

       EVI2A 125 vCeennnkmamLiCliii 142
                 +C   ++k  + iC   i
  KHJ30653.1 168 ICRAAQAKANIQICTTAI 185
                 **************8766 PP

>> Tape_meas_lam_C  Lambda phage tail tape-measure protein (Tape_meas_lam_C)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.93   8.3e+03      18      32 ..      98     112 ..      95     114 .. 0.63
   2 ?   11.3   0.0   3.2e-05      0.28      26      54 ..     178     210 ..     166     221 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.93
  Tape_meas_lam_C  18 asnvagqvaeaatsa 32 
                      a+  agqv+++ +s+
       KHJ30653.1  98 AARGAGQVKDLSKSI 112
                      555677777776664 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 3.2e-05
  Tape_meas_lam_C  26 aeaatsafdsmedalaefvttGklsfsd....l 54 
                       ++ t+a++  ed+l+ ++t+G  sf +    +
       KHJ30653.1 178 IQICTTAINAVEDSLSPMLTGGNKSFVNslrvF 210
                      5789*******************9997744442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2028.82
//
Query:       KHJ30654.1  [L=376]
Description: putative s- glutathione dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-25   88.6   2.3    5.5e-25   87.4   2.3    1.7  1  ADH_N            Alcohol dehydrogenase GroES-like domain
    5.6e-19   68.4   0.2    9.6e-19   67.6   0.2    1.4  1  ADH_zinc_N       Zinc-binding dehydrogenase
    0.00034   20.9   0.2    0.00073   19.8   0.2    1.5  1  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
     0.0008   20.5   0.0     0.0015   19.6   0.0    1.4  1  ADH_zinc_N_2     Zinc-binding dehydrogenase
      0.006   15.9   1.3       0.01   15.1   1.3    1.3  1  AlaDh_PNT_C      Alanine dehydrogenase/PNT, C-terminal domain
  ------ inclusion threshold ------
      0.023   14.3   0.1       0.04   13.5   0.1    1.4  1  UDPG_MGDP_dh_N   UDP-glucose/GDP-mannose dehydrogenase family
       0.14   12.1   0.2        4.1    7.3   0.0    2.3  2  PhnG             Phosphonate metabolism protein PhnG


Domain annotation for each model (and alignments):
>> ADH_N  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.4   2.3   2.2e-28   5.5e-25       2     108 ..      32     158 ..      31     159 .. 0.88

  Alignments for each domain:
  == domain 1  score: 87.4 bits;  conditional E-value: 2.2e-28
                 TEEEEEEEEEEE-HHHHHHHTTSTTTTSSSSEE---EEEEEEEEESTT-CS--TT-EEEE-SEEE-SSSHHHHTT-GGG-................... CS
       ADH_N   2 gevlikvkaagiCgsDlhilkggkelevklplilGHEivGeveevgpevkklkvGdrVvvepliscgeCaaCkegeenlC................... 81 
                 +ev+i+++++g+C++D  +l+g k+ e  +p+ilGHE +G+ve+vg++v++++ Gd+V+   + +c eC++Ck+g++nlC                   
  KHJ30654.1  32 HEVRIQIHYTGVCHTDHYTLSG-KDAEGLFPVILGHEGSGIVESVGEGVTSVQPGDHVIPLYIPECRECKECKSGKTNLCgriratqgkgvmpdgssrf 129
                 89*******************9.9************************************99999***************9999999999988888888 PP

                 ..TTBEETTTSS-SSSBSEEEECGGGEEE CS
       ADH_N  82 ..eeakllgvsldGgfaeyvvvpekklvk 108
                   + ++++ +    +f++y+vv e ++v+
  KHJ30654.1 130 rcRGKEIYHYMGTSTFSQYTVVAEISIVP 158
                 87444454444455889999888877776 PP

>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.6   0.2   3.8e-22   9.6e-19       2     119 ..     202     324 ..     201     334 .. 0.88

  Alignments for each domain:
  == domain 1  score: 67.6 bits;  conditional E-value: 3.8e-22
                 HHHHHHHHHHHTT-.EEEEEESSHHHHHHHHHTTESEEEET....TTCHHHHHHHHHTTTSSEEEEEESSCSHHHHHHHHHCEEEE.EEEEECSCTSSE CS
  ADH_zinc_N   2 vGlaavqlAkalGa.eviavdsseeklelakklGadeviny....keadlverikeltggegvdvvfecvGsgatleaalkllkpg.GrlvvvGggkge 94 
                 vGl +vq A   +a ++i+vd++++k   a++lGa+ ++n+     + ++v+++ e+t+ +g d+ f+c+G+ ++++aal+++++g G+  ++G+   +
  KHJ30654.1 202 VGLSVVQGAVKNKAsRIIVVDINAKKKSWAERLGATDFVNPneleGQ-SIVAKLVEMTD-GGCDYTFDCTGNVSVMRAALEACHRGwGQSIIIGVAASG 298
                 9****************************************764322.6*********5.5**********************************6666 PP

                 EEEEHHHHH.HTT-EEEEE-SSCHHH CS
  ADH_zinc_N  95 eefdlrnll.lkeksilGsllgslre 119
                 +e+++r++   + +  +Gs +g+++ 
  KHJ30654.1 299 QEISTRPFQlVTGRVWKGSAFGGIKG 324
                 6799999554999999*****99544 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.2   2.9e-07   0.00073       1      91 [.     194     284 ..     194     286 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 2.9e-07
                      EEEE--SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHH.TTTCEEEEE--TTTHHHHHHHHHTTS.SEEEE-SSGG.GHHHHHHHHHH CS
  Sacchrp_dh_NADP   1 vliiGaGsvGqavaellarhfdvdaeitvadrskeklealaaka.lgvrfeaialdaenyeavLaallkeg.dlvvnlsppi.ssldvlkaCie 91 
                      v ++GaG+vG +v++  ++++    +i+v+d + +k +  a+ + +   +++ +l  + + a L+++  +g d   ++++++   ++ l+aC++
       KHJ30654.1 194 VAVFGAGCVGLSVVQGAVKNKAS--RIIVVDINAKK-KSWAERLgATDFVNPNELEGQSIVAKLVEMTDGGcDYTFDCTGNVsVMRAALEACHR 284
                      679******************99..***********.4555555455557789999999999999999999***********666699999986 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   5.9e-07    0.0015      16     125 ..     256     365 ..     234     367 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 5.9e-07
                   HHH-TT-EEEEEES-HHHHH.HHHHHHE.EEEEEEEE----.S-EEE-CHHHCTTT-EEEE--GGG...-.-HHHHHHHHHHHHHHH---..-EEEE CS
  ADH_zinc_N_2  16 aatggegvDvvldtvggealleaslkvl.pggGrlvsiggpplsaallkpakkrkgrsvkyeflfsmkasaqadileelaalieeGklrp..vvdrv 109
                   + t  +g D+ +d++g+ + ++a+l+++ +g G+ + ig     ++++ ++++  +++v     f   ++ + + l  l++ +  G+l++   ++++
    KHJ30654.1 256 EMT-DGGCDYTFDCTGNVSVMRAALEAChRGWGQSIIIGVAASGQEISTRPFQLVTGRVWKGSAFGGIKG-RSQ-LPGLVEDYMCGNLKVeeFISHR 349
                   455.467*********99999*******9999**988885456667777777666666666666655556.777.************9983358888 PP

                   EEGGGHHHHHHHHHSS CS
  ADH_zinc_N_2 110 fpleeaaeAhrylesg 125
                   ++++++++A+r+le+g
    KHJ30654.1 350 LDFDKINDAFRLLETG 365
                   **************98 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   1.3     4e-06      0.01      18      76 ..     183     241 ..     174     260 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 4e-06
                  ETTCEETCB---EEEEESTSHHHHHHHHHHHHTT-.EEEEEESSHHHHHHHHHTTTC.ECE CS
  AlaDh_PNT_C  18 tlaGgvpgvepakvlviGgGvaGlqAiatakglga.kVtvlDvrparleqleslgak.fve 76 
                  +  ++++  e ++v v+G+G +Gl+ ++ a++ +a ++ v+D++++++   e lga+ fv+
   KHJ30654.1 183 IQTAKIE--EGSNVAVFGAGCVGLSVVQGAVKNKAsRIIVVDINAKKKSWAERLGATdFVN 241
                  4445555..7899*****************9888736999***********9988761444 PP

>> UDPG_MGDP_dh_N  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   1.5e-05      0.04       2      35 ..     193     227 ..     192     243 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.5e-05
                     EEEEE--STTHHHH.HHHHHHCTSEEEEE-S-HHH CS
  UDPG_MGDP_dh_N   2 kisviGlGYvGlvt.aavlaeighevigvDideek 35 
                     +++v+G+G vGl     ++ ++   +i+vDi+++k
      KHJ30654.1 193 NVAVFGAGCVGLSVvQGAVKNKASRIIVVDINAKK 227
                     79*********965155677888*********998 PP

>> PhnG  Phosphonate metabolism protein PhnG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0    0.0016       4.1      71     107 ..     199     235 ..     128     253 .. 0.81
   2 ?    2.7   0.1     0.045   1.1e+02      43      82 ..     254     294 ..     245     300 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0016
                 TS-EEEEEEESS-HHHHHHHHHHHHHCTSHHHHHHHH CS
        PhnG  71 dgtvGvayvlgrdkrkAelaAllDAllqtpereeele 107
                 +g vG+++v+g  k+kA+ + ++D   ++++++e+l 
  KHJ30654.1 199 AGCVGLSVVQGAVKNKASRIIVVDINAKKKSWAERLG 235
                 5669********************9999999888774 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.045
                 EEEEEGGGTSSEEE.EEEEEEEEEEEEETTS-EEEEEEESS CS
        PhnG  43 mvrgraggtgepFn.lGEvtvtraavrledgtvGvayvlgr 82 
                 +v + +gg    F   G+v+v raa++  +   G ++++g 
  KHJ30654.1 254 LVEMTDGGCDYTFDcTGNVSVMRAALEACHRGWGQSIIIGV 294
                 7888999999999527***********98888999988885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 2815.00
//
Query:       KHJ30655.1  [L=666]
Description: putative glutamate-cysteine ligase catalytic subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.1e-172  573.6   0.1   2.6e-172  573.2   0.1    1.1  1  GCS       Glutamate-cysteine ligase


Domain annotation for each model (and alignments):
>> GCS  Glutamate-cysteine ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  573.2   0.1  1.4e-176  2.6e-172       1     362 [.     262     647 ..     262     650 .. 0.98

  Alignments for each domain:
  == domain 1  score: 573.2 bits;  conditional E-value: 1.4e-176
         GCS   1 iymDamgfGmGsccLQvtfqaknieearllYdqlaplaPillalsaaspiykGlladvdvrwnvisasvDdrteeErgeeplknekkripksrydsvdl 99 
                 i+mDam+fGmGsccLQ+tf akni+e+rllYdql+pl+Pillal+aa+piykG+lad+dvrwn+isasvDdrt+eErge+plk++++ripksry+s+++
  KHJ30655.1 262 IHMDAMAFGMGSCCLQITFLAKNIHEGRLLYDQLSPLGPILLALTAATPIYKGFLADTDVRWNQISASVDDRTKEERGEKPLKTDRWRIPKSRYASNST 360
                 8************************************************************************************************** PP

         GCS 100 ylseekrlreeyndlelpldeevlkklleagvdellakhiahlfirdplvifeekieqddekstdhFeniqstnWqtlrfKpPppesekigWrvefRpm 198
                 y+s ++rlr+ey d +l++  e+ k l+++g+d+lla+h+ahlfirdp+vif+e++++ d ++tdhFen+qstnWq++rfKpPp++++ igWrvefRpm
  KHJ30655.1 361 YISVDSRLRQEYLDPDLVFAPEIRKLLMDGGMDSLLATHFAHLFIRDPIVIFAEDLQELDLDKTDHFENFQSTNWQHIRFKPPPADNS-IGWRVEFRPM 458
                 ************************************************************************************8877.********** PP

         GCS 199 evqltdfenaafsvfivLltrvilsfklnfyipiskvdenmkrAhkrdavleekfyfrkniakkeeaaekak.....................eieemt 276
                 e+q+tdfenaa++vfivLltr+ilsf+lnfyipi+k denm++Ahk+dav +ekfyfrkn +++++++  +                      e+++m+
  KHJ30655.1 459 EIQITDFENAAYAVFIVLLTRAILSFNLNFYIPIQKTDENMQTAHKKDAVIKEKFYFRKNPFDTKQTDFMTIhethstpnphqpstklasiedEYALMS 557
                 *************************************************************9999987665589999********************** PP

         GCS 277 ideiingk....egefpglipliesylesvevdvetrkklekylkliskrasgelltaAkwiRefvakhpdYkkdSvvsdeinydLlkkv 362
                 id+i+ng+    +g+fpglip++e+yl+++++d et++kl++yl+li++rasg+l+taAkwiRefv++h+dYk dS +sd+in+dL+++v
  KHJ30655.1 558 IDTIVNGSnkdqDGNFPGLIPIVENYLDNMNIDFETHCKLASYLDLIRNRASGSLWTAAKWIREFVRDHEDYKADSHISDQINHDLIQAV 647
                 *******99888899************************************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (666 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       559  (0.0311785); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 4577.10
//
Query:       KHJ30656.1  [L=88]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       589  (0.0328518); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 657.45
//
Query:       KHJ30657.1  [L=1106]
Description: putative karyopherin-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.9e-21   74.0   0.1    0.00011   22.6   0.0    7.4  7  HEAT_EZ         HEAT-like repeat
    3.4e-16   57.9   1.7    0.00024   21.1   0.1    7.8  6  HEAT            HEAT repeat
    8.6e-13   48.5   1.2     0.0092   16.4   0.1    6.0  5  HEAT_2          HEAT repeats
      1e-10   41.4   1.9      1e-09   38.2   0.3    3.4  2  IBN_N           Importin-beta N-terminal domain
    1.2e-08   34.0   1.1     0.0039   15.8   0.0    4.4  4  Adaptin_N       Adaptin N terminal region
    6.6e-08   32.0   6.8     0.0044   16.2   0.1    4.1  3  IFRD            Interferon-related developmental regulator (I
    7.2e-08   32.6   7.2      0.077   13.0   0.0    5.8  5  Cnd1            non-SMC mitotic condensation complex subunit 
      8e-08   32.1   2.9     0.0079   16.2   0.0    6.5  6  Arm             Armadillo/beta-catenin-like repeat
    9.5e-08   32.5   0.0        3.2    8.4   0.0    5.7  5  Vac14_Fab1_bd   Vacuolar 14 Fab1-binding region
    7.8e-07   29.0   3.3       0.43   10.3   0.0    5.6  5  RIX1            rRNA processing/ribosome biogenesis
    2.5e-06   26.9   9.3    1.3e-05   24.5   0.2    4.9  4  MMS19_C         RNAPII transcription regulator C-terminal
    6.7e-05   23.1   0.3      0.024   14.8   0.0    3.6  4  ParcG           Parkin co-regulated protein
    0.00013   21.2   8.8       0.29   10.2   0.0    4.8  5  Dopey_N         Dopey, N-terminal
    0.00013   20.9   1.2       0.26   10.1   0.2    2.7  3  API5            Apoptosis inhibitory protein 5 (API5)
     0.0017   18.0   2.9       0.16   11.5   0.0    4.0  5  CLASP_N         CLASP N terminal
  ------ inclusion threshold ------
      0.017   15.3   0.3        1.5    9.0   0.2    3.6  3  RTP1_C1         Required for nuclear transport of RNA pol II 
      0.053   13.1   3.7          3    7.3   0.0    4.0  4  Tti2            Tti2 family
      0.059   14.1   0.4        7.2    7.6   0.0    4.4  4  HEAT_PBS        PBS lyase HEAT-like repeat
      0.071   13.8   0.4       0.16   12.6   0.4    1.5  1  Nitr_red_assoc  Conserved nitrate reductase-associated protei
       0.11   12.5   1.2          9    6.3   0.0    3.7  4  FlaF            Flagellar protein FlaF
        2.6    8.8   8.1         17    6.2   0.1    4.3  4  Tn7_Tnp_TnsA_C  TnsA endonuclease C terminal


Domain annotation for each model (and alignments):
>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.9   1.6e+03      26      49 ..      35      59 ..      29      62 .. 0.82
   2 ?    0.5   0.0       1.1   9.4e+02      14      49 ..     238     275 ..     231     278 .. 0.84
   3 !   21.7   0.1   2.4e-07   0.00021       2      49 ..     361     408 ..     360     409 .. 0.95
   4 !   17.1   0.1     7e-06     0.006       3      39 ..     403     439 ..     401     454 .. 0.86
   5 !   22.6   0.0   1.3e-07   0.00011      22      55 .]     477     510 ..     462     510 .. 0.91
   6 !   10.0   0.0    0.0011      0.98       6      55 .]     902     951 ..     898     951 .. 0.63
   7 ?   -2.4   0.0       8.9   7.6e+03      31      52 ..     970     991 ..     964     991 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.9
     HEAT_EZ 26 vpeilpaLlalLnddsd.eVRaaAa 49
                +pe l +Ll +L++ ++ e+R+ Aa
  KHJ30657.1 35 QPESLLYLLHFLTSNEAsEIRQLAA 59
                6888999999999999989977775 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 1.1
     HEAT_EZ  14 laggepellqplvpeilpaLlalLnddsd..eVRaaAa 49 
                 l+++ep ll+++ +++l +++   ++ +   e+R++A+
  KHJ30657.1 238 LLSCEPSLLNKHFKDLLNFMIEISSNTNIssETRCQAL 275
                 56899****************99988888766688876 PP

  == domain 3  score: 21.7 bits;  conditional E-value: 2.4e-07
     HEAT_EZ   2 rvRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAa 49 
                   R a+++aLG + +g+p+ +  +++ ++p  l+lL d++ +VR aA+
  KHJ30657.1 361 KYRQAGILALGMCVEGAPDFICSQLDTLMPSILQLLHDSDISVRRAAL 408
                 68**********999*********************99999****997 PP

  == domain 4  score: 17.1 bits;  conditional E-value: 7e-06
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilpaLlalLnd 39 
                 vRraA+++++rla   +e+l++++++++p Ll+ L +
  KHJ30657.1 403 VRRAALNGVSRLADDLAEDLSKHHEQLIPILLKNLDS 439
                 9*******************************76633 PP

  == domain 5  score: 22.6 bits;  conditional E-value: 1.3e-07
     HEAT_EZ  22 lqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 ++ +++e++p L++lL++++ +V+  AagaLg +
  KHJ30657.1 477 IRNYITELVPRLGNLLSHSDLTVKSSAAGALGSI 510
                 56799***************************86 PP

  == domain 6  score: 10.0 bits;  conditional E-value: 0.0011
     HEAT_EZ   6 aAawaLGrlaggepellqplvpeilpaLlalLnddsd.eVRaaAagaLgnl 55 
                 aA+ +++++ g+ ++ + p+ + +l +Ll +L d +d e++ +Aa a+g+l
  KHJ30657.1 902 AAVGVIAECIGNMGDSVTPYTKTLLTLLLHRLDD-EDgETKSNAAFAIGQL 951
                 5555555544333344555666666666666655.555***********97 PP

  == domain 7  score: -2.4 bits;  conditional E-value: 8.9
     HEAT_EZ  31 paLlalLnddsdeVRaaAagaL 52 
                   L +lLn+ +++ + +A+g++
  KHJ30657.1 970 NKLEPLLNTQHSRSKDNAVGCI 991
                 57999**999999999999986 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0        10   8.5e+03       5      21 ..      42      59 ..      41      61 .. 0.77
   2 ?    1.9   0.0       0.4   3.4e+02       8      30 ..     354     376 ..     347     377 .. 0.81
   3 !   21.1   0.1   2.8e-07   0.00024       1      29 [.     388     416 ..     388     418 .. 0.94
   4 ?   -1.3   0.1       4.5   3.8e+03       1      10 [.     429     438 ..     429     447 .. 0.85
   5 !   13.0   0.0   0.00011     0.094       1      30 [.     484     513 ..     484     514 .. 0.94
   6 !   12.1   0.0   0.00022      0.19       1      30 [.     925     954 ..     925     955 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 10
                HHHHH.T-SSHHHHHHHH CS
        HEAT  5 llkll.sDpspeVReaAa 21
                ll+ l s +++e+R+ Aa
  KHJ30657.1 42 LLHFLtSNEASEIRQLAA 59
                566675679999**9997 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.4
                 HHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   8 llsDpspeVReaAakaLgalaev 30 
                   + ++p+ R+a ++aLg  +e+
  KHJ30657.1 354 YVKNSNPKYRQAGILALGMCVEG 376
                 567799************98876 PP

  == domain 3  score: 21.1 bits;  conditional E-value: 2.8e-07
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 l+P +l+ll+D++ +VR+aA++ + +la 
  KHJ30657.1 388 LMPSILQLLHDSDISVRRAALNGVSRLAD 416
                 8************************9996 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 4.5
                 HHHHHHHHHT CS
        HEAT   1 llPlllklls 10 
                 l+P+llk+l 
  KHJ30657.1 429 LIPILLKNLD 438
                 79*****994 PP

  == domain 5  score: 13.0 bits;  conditional E-value: 0.00011
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 l+P l +lls+++  V ++Aa aLg +ae 
  KHJ30657.1 484 LVPRLGNLLSHSDLTVKSSAAGALGSIAES 513
                 7899999*********************85 PP

  == domain 6  score: 12.1 bits;  conditional E-value: 0.00022
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 ll lll+ l D++ e  ++Aa a+g+l+ +
  KHJ30657.1 925 LLTLLLHRLDDEDGETKSNAAFAIGQLVFH 954
                 7889***********************865 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.2     0.033        28      12      81 ..      16      99 ..       6     109 .. 0.72
   2 ?   -1.0   0.0       2.7   2.3e+03      33      58 ..     159     189 ..     121     231 .. 0.62
   3 !   16.4   0.1   1.1e-05    0.0092       6      71 ..     353     437 ..     345     440 .. 0.70
   4 !    9.8   0.0    0.0012         1      21      64 ..     469     519 ..     453     531 .. 0.74
   5 !    9.6   0.0    0.0014       1.2       2      51 ..     927     987 ..     922    1022 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.033
      HEAT_2 12 pdpevrraairaLg..rignpealpaLvell.ededpavRraaaeaLgai...........gdpealpaLkellddddddvvRe 81
                p+++  +aa  +L    +  pe+l +L+ +l ++e +++R+ aa  + ++           + + + + L++++++++++ +R+
  KHJ30657.1 16 PNTQRVKAATSELRknYYTQPESLLYLLHFLtSNEASEIRQLAAVGATRLvdqhwstlndeQKSTFRERLLQCVLEEQKSTIRN 99
                5555556777778876567889999999999677999*******9998775555555532223447888888888888888886 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.7
      HEAT_2  33 lpaLvell....ed.edpavRraaaeaLgai 58 
                 lp L++ll    +d e+++ R +    L+++
  KHJ30657.1 159 LPDLFQLLnttiKDpESAEARINSLLCLSWV 189
                 3444444432125534466777777777776 PP

  == domain 3  score: 16.4 bits;  conditional E-value: 1.1e-05
      HEAT_2   6 qalendpdpevrraairaLg........rignp.....ealpaLvellededpavRraaaeaLgaig..........dpealpaLkell 71 
                 +++ + ++p+ r+a i aLg                  +++p +++ll d+d  vRraa +  ++++          +++ +p+L++ l
  KHJ30657.1 353 EYV-KNSNPKYRQAGILALGmcvegapdF---IcsqldTLMPSILQLLHDSDISVRRAALNGVSRLAddlaedlskhHEQLIPILLKNL 437
                 455.899*************776666642...03346578***********************99963322222222355666666665 PP

  == domain 4  score: 9.8 bits;  conditional E-value: 0.0012
      HEAT_2  21 iraLg..rignp..ealpaLvellededpavRraaaeaLgaigd...peal 64 
                 +r +   +i+n   e++p L +ll+++d  v   aa aLg i++   +++l
  KHJ30657.1 469 CRGISkiSIRNYitELVPRLGNLLSHSDLTVKSSAAGALGSIAEsseDAFL 519
                 6666633334424499************************99852223345 PP

  == domain 5  score: 9.6 bits;  conditional E-value: 0.0014
      HEAT_2   2 daLlqalendpdpevrraairaLg.....rignp..........ealpaLvellededpavRraa 51 
                  +Ll +l +d+d e++ +a+ a+g     +   +          ++++ L +ll++++++   +a
  KHJ30657.1 927 TLLLHRL-DDEDGETKSNAAFAIGqlvfhS---TasseylsaftTIFNKLEPLLNTQHSRSKDNA 987
                 5799999.9***************554431...33334454444557777777777666655555 PP

>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.2   0.3   1.2e-12     1e-09       7      73 ..      31      90 ..      24     103 .. 0.91
   2 ?   -0.0   0.1      0.97   8.3e+02      10      41 ..     249     280 ..     245     309 .. 0.85

  Alignments for each domain:
  == domain 1  score: 38.2 bits;  conditional E-value: 1.2e-12
                HHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHCGSXHHHHHHHHHHHHHHHH CS
       IBN_N  7 qlekqpgflsallqilanseselevRqlAalyLknlitkhWsdeeekqslpseekeqIrnnllnllg 73
                +  +qp++l++ll+ l++ e + e+RqlAa+  ++l+++hWs      +l +e+k ++r+ ll++++
  KHJ30657.1 31 NYYTQPESLLYLLHFLTSNEAS-EIRQLAAVGATRLVDQHWS------TLNDEQKSTFRERLLQCVL 90
                5667******************.*******************......*************999875 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.97
                 CSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHH CS
       IBN_N  10 kqpgflsallqilanseselevRqlAalyLkn 41 
                 ++ + l++ ++i +n++ + e+R  A++ L +
  KHJ30657.1 249 HFKDLLNFMIEISSNTNISSETRCQALSFLMQ 280
                 4788899999*************999988865 PP

>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.2     0.029        25     145     201 ..     205     257 ..     159     269 .. 0.83
   2 !   11.6   0.1   8.4e-05     0.072     254     409 ..     256     419 ..     253     452 .. 0.66
   3 !   15.8   0.0   4.5e-06    0.0039     118     314 ..     350     575 ..     337     583 .. 0.76
   4 !    8.9   0.0   0.00056      0.48     110     257 ..     879    1061 ..     876    1105 .. 0.71

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.029
                 CHHCCCCCHHHHHHHCTT-SSHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHH CS
   Adaptin_N 145 dpdllrkqlveeikellsdkdpgvvlaAvalleeikkndrlllkllpklvrrLcnll 201
                   d++++ +v+ +k ++++++ g +  A+ +++ +  + +   +ll+k+++ L n++
  KHJ30657.1 205 FNDIFPQ-MVNVLKVAIQEDHEGHIMQAFEVFQTL-LSCEP--SLLNKHFKDLLNFM 257
                 6677766.59*************************.44455..77********9987 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 8.4e-05
                 HCCHCCCCST.HHHCCHHCHHHHHH.SSCCTCHHHHHCHHHHHHHHXXTTTT.TTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHH....HHHHHH CS
   Adaptin_N 254 livelapkne.livlavnaLvrlls.skdenlryvaLrtllkivkkepkavq.hldlkifllktdddvsirlkaldlllklvdesNvke....ivkeLk 345
                 +++e++++++ + +  ++aL  l++ +k   ++   L+ + +  +   k++q   +++  l + dddv  ++ al ll  l+++   ++    ++k L 
  KHJ30657.1 256 FMIEISSNTNiSSETRCQALSFLMQaTKFRKMKIQGLKDMGETITL--KSMQiASEIDDTLPEDDDDVTPSKSALGLLDLLASSLPPRQviipLLKVLP 352
                 5555555555444445556655555333333333344444333333..477777777777777777777778888777777776544444444899999 PP

                 HHTTSSXXHHHHHHHHHHHHHHHHHS....CCHHHHHHHHHHHHHTTXXHHHHHHHHHHHHHHHHHST CS
   Adaptin_N 346 kyvkevadedfksklvkaIgrlaekf....atdaewvldvllellslsgesvkdeivevirdliqkvp 409
                 +yvk++ ++ ++++ + a+g + e       ++ ++ ++ +l+ll +s+ sv++++++ + +l    +
  KHJ30657.1 353 EYVKNS-NPKYRQAGILALGMCVEGApdfiCSQLDTLMPSILQLLHDSDISVRRAALNGVSRLADDLA 419
                 999555.8889999999999999998666667778888888999999999999999988887765544 PP

  == domain 3  score: 15.8 bits;  conditional E-value: 4.5e-06
                 HHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCC...HHHHHHHCTT-SSHHHHHHHHHHHHHH..HCCCCCCC...HHHHHHHCCHHH..HHHCS-H CS
   Adaptin_N 118 aikkllkdrspyvrkkAalailklykkdpdllrkq...lveeikellsdkdpgvvlaAvalleei..kkndrlll...kllpklvrrLcn..llteldp 206
                  + + +k ++p  r++ +la+  +++  pd +  q   l++ i +ll+d+d++v +aA++   ++  +  ++l +   +l+p l ++L+   +l+++++
  KHJ30657.1 350 VLPEYVKNSNPKYRQAGILALGMCVEGAPDFICSQldtLMPSILQLLHDSDISVRRAALNGVSRLadDLAEDLSKhheQLIPILLKNLDSagCLSDSSE 448
                 56677788888888888888888888888866444235799************************7633333333666888888888886224588889 PP

                 HHHHHHHHHHCC---SSHHHH............HHHHHHHCGGCGCSSCHHHHHHHHHCCHCCCCST.....HHHCCHHCHHHHHHSSCCT....CHHH CS
   Adaptin_N 207 wlqvkiiklltrlarqepeersk..........kellesllnllqssnnaVlletvnlivelapkne.....livlavnaLvrllsskden....lryv 286
                     k +++l++ +   ++               el+++l nll++s  +V  +++ ++ ++a+++e       +  + aL ++ls kd++    lr v
  KHJ30657.1 449 AEVSKNLDILKSSCGAIDSVCRGiskisirnyiTELVPRLGNLLSHSDLTVKSSAAGALGSIAESSEdaflpYFETSMGALSQFLSIKDTSeeldLRGV 547
                 999999999976665544444235557777788999*******************************99999677788888888875554323339999 PP

                 HHCHHHHHHHHXXTTTTTTTCCCCSXXT CS
   Adaptin_N 287 aLrtllkivkkepkavqhldlkifllkt 314
                 ++++   i++   ++v++++++i +  +
  KHJ30657.1 548 VCDAVGCIATAVGPEVFKPYVNILMQTS 575
                 9999999999999999999888876555 PP

  == domain 4  score: 8.9 bits;  conditional E-value: 0.00056
                  CCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCT....T-SSHHHHHHHHHHHHHH...HCCCCCCCHHHHHHHCCHHH CS
   Adaptin_N  110 elaedlapaikkllkdrspyvrkkAalailklykkdpdllrkqlveeikell....sdkdpgvvlaAvalleei...kkndrlllkllpklvrrLcn 199 
                  el +++ + i+k ++++ +y r++A+  i+ ++ +  d + + +++ +  ll    +d+d   +++A  ++ ++        ++l++   ++++L+ 
  KHJ30657.1  879 ELWKIFQKPIMKFASSQVNYERSAAVGVIAECIGNMGDSVTP-YTKTLLTLLlhrlDDEDGETKSNAAFAIGQLvfhSTASSEYLSAFTTIFNKLEP 974 
                  566778889999999999999999999999999998888877.466666666666699999999999999999988777777777999999999998 PP

                  HH....................HCS-HHHHHHHHHHHCC---SSHHHH..HHHHHHHCGGCGCSSCHHHHHHHHHCC.........H CS
   Adaptin_N  200 ll....................teldpwlqvkiiklltrlarqepeerskkellesllnllqssnnaVlletvnliv.........e 257 
                  ll                    +e d   + +++  + +l + +++ ++++ l++++  l +++++ +l  t++li          +
  KHJ30657.1  975 LLntqhsrskdnavgcicrmimSEIDHVPIQEVLPAIIDLLPLKEDYEENSPLFDCISGLYNQAHPLILSQTAKLIPifasvlgepY 1061
                  889999999999999999855544444455555555556666666655668899999999999999999888888864444444332 PP

>> IFRD  Interferon-related developmental regulator (IFRD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1   5.1e-06    0.0044     102     205 ..     141     240 ..      74     259 .. 0.75
   2 !   12.9   1.2   5.3e-05     0.045     104     255 ..     369     516 ..     247     542 .. 0.85
   3 ?    2.4   0.0     0.081        70     116     172 ..     916     970 ..     869     999 .. 0.53

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 5.1e-06
        IFRD 102 lkalallcitlgagdeseeileelkpvLkriikdssvslsakaaaieaLglltfvggadeeeieelmeflleifssdgqsieaadsaska.lvtaalsa 199
                 l ++  l +  +a +  e+ l +l+++L+++ikd + s++a+ + + +L++++++ + d  e   + +++ +if +  +  + a +++++  +  a + 
  KHJ30657.1 141 LYIIYTL-LE-DAFEIFEDKLPDLFQLLNTTIKDPE-SAEARINSLLCLSWVAIMLEPD--EHKASFDCFNDIFPQMVNVLKVAIQEDHEgHIMQAFEV 234
                 5554444.33.34445566788999***********.******************9766..9999********98887766554444422356666666 PP

        IFRD 200 wglLlt 205
                    Ll+
  KHJ30657.1 235 FQTLLS 240
                 655555 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 5.3e-05
        IFRD 104 alallcitlgagdeseeileelkpvLkriikdssvslsakaaaieaLg.lltfvggadeeeieelmeflleifssdgqsieaadsas.ka..lvtaals 198
                 al+ +c+  ga d   + l++l p + ++++ds+  +s++ aa++  + l+  ++++  +  e+l  +ll+ + s+g   ++++++  k+  ++ + + 
  KHJ30657.1 369 ALG-MCVE-GAPDFICSQLDTLMPSILQLLHDSD--ISVRRAALNGVSrLADDLAEDLSKHHEQLIPILLKNLDSAGCLSDSSEAEVsKNldILKSSCG 463
                 333.5677.77777788899999*********99..9***********6666677777888899999*********9999887777755599******* PP

        IFRD 199 awglLltllpssklnkkleedleealealvelLdssdvevriAAGeaiALlfElsre 255
                 a   ++  +++ +++++  e    ++++l +lL++sd+ v+  A  a++ + E s++
  KHJ30657.1 464 AIDSVCRGISKISIRNYITE----LVPRLGNLLSHSDLTVKSSAAGALGSIAESSED 516
                 *********88888888877....6***************************98854 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.081
        IFRD 116 deseeileelkpvLkriikdssvslsakaaaieaLglltfvggadeeeieelmefll 172
                 d+   + ++l ++L   + d++   ++k++a+ a+g l+f ++a+ e +  + +++ 
  KHJ30657.1 916 DSVTPYTKTLLTLLLHRLDDED--GETKSNAAFAIGQLVFHSTASSEYLSAFTTIFN 970
                 3333344444444444444444..666666666666666666666444433333332 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1      0.23     2e+02      33     119 ..      50     143 ..      37     158 .. 0.67
   2 ?    3.1   1.2       0.1        86      65     128 ..     218     283 ..     125     294 .. 0.72
   3 !   13.0   0.0     9e-05     0.077      19      65 ..     385     435 ..     377     457 .. 0.84
   4 ?    4.8   0.0      0.03        26      58     106 ..     483     531 ..     468     549 .. 0.74
   5 !    7.4   0.0    0.0048       4.1      19     105 ..     922    1016 ..     898    1101 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.23
        Cnd1  33 edpyVRktaaivvakLilnd...mvkekg..flselakll.eDenprVvanalaalteisek.senaiynllpdiisklsdalnecsewgqiti 119
                 e + +R+ aa++ ++L+++    +  e++  f ++l++++ e+++++++++   +   i++   ++   ++lp+ + +  ++ ++ ++++  +i
  KHJ30657.1  50 EASEIRQLAAVGATRLVDQHwstLNDEQKstFRERLLQCVlEEQKSTIRNLLSRVVAAIANLdFKQGQWTQLPSWLAQAATSEKTRHRETGLYI 143
                 6678999999999999665533233333346888999988688889999998888888887743344555666666665555555555554444 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.1
        Cnd1  65 kll.eDenprVvanalaalteiseksenaiynllpdiisklsd..alnecsewgqitilefLlsyip 128
                  ++ eD++  +++ a  +++ +++ +++++ + ++d+++ + +  + +++s +++++ l+fL++ ++
  KHJ30657.1 218 VAIqEDHEGHIMQ-AFEVFQTLLSCEPSLLNKHFKDLLNFMIEisSNTNISSETRCQALSFLMQATK 283
                 3443333344433.44456666666666666677776666665544556999999999999998776 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 9e-05
        Cnd1  19 veylvepLrkrLkDedpyVRktaaivvakL...ilndmvkekg.flselak 65 
                 ++ l++ + + L+D+d  VR+ a+ +v++L   + +d+ k  + ++  l+k
  KHJ30657.1 385 LDTLMPSILQLLHDSDISVRRAALNGVSRLaddLAEDLSKHHEqLIPILLK 435
                 68899999**********************999999999988855555554 PP

  == domain 4  score: 4.8 bits;  conditional E-value: 0.03
        Cnd1  58 gflselaklleDenprVvanalaalteiseksenaiynllpdiisklsd 106
                 +++ +l +ll+ ++ +V ++a  al  i+e se+a++  + +++  ls+
  KHJ30657.1 483 ELVPRLGNLLSHSDLTVKSSAAGALGSIAESSEDAFLPYFETSMGALSQ 531
                 4667788888888888888888888888888888888877777777765 PP

  == domain 5  score: 7.4 bits;  conditional E-value: 0.0048
        Cnd1   19 veylvepLrkrLkDedpyVRktaaivvakL.....ilndmvkekg.flselaklleDenprVvanalaalteisek..senaiynllpdiiskls 105 
                  +  l++ L +rL Ded   + +aa+++ +L      + ++      ++++l+ ll+ +++r  +na+ +++ +     +  +i ++lp ii  l 
  KHJ30657.1  922 TKTLLTLLLHRLDDEDGETKSNAAFAIGQLvfhstASSEYLSAFTtIFNKLEPLLNTQHSRSKDNAVGCICRMIMSeiDHVPIQEVLPAIIDLLP 1016
                  55667778899999999999999999999976555455556555558888888888888888888888777665554566667777777777665 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0098       8.3      15      40 ..     390     415 ..     388     416 .. 0.89
   2 !   16.2   0.0   9.3e-06    0.0079      14      40 ..     485     511 ..     478     512 .. 0.91
   3 ?    1.9   0.0      0.29   2.4e+02      13      37 ..     711     735 ..     709     736 .. 0.92
   4 ?   -0.9   0.0       2.3     2e+03      16      39 ..     928     951 ..     924     953 .. 0.80
   5 ?   -1.0   0.0       2.4     2e+03      19      37 ..     974     992 ..     970     994 .. 0.87
   6 ?   -2.2   0.1       5.9     5e+03       6      21 ..    1000    1015 ..     999    1020 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0098
                 HHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm  15 ppLvrLLssedeevqeeAawALsNLa 40 
                 p  ++LL++ d +v+++A+  +s La
  KHJ30657.1 390 PSILQLLHDSDISVRRAALNGVSRLA 415
                 7789***************9999887 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 9.3e-06
                 HHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm  14 vppLvrLLssedeevqeeAawALsNLa 40 
                 vp+L +LLs+ d +v+  Aa+AL+ +a
  KHJ30657.1 485 VPRLGNLLSHSDLTVKSSAAGALGSIA 511
                 9***********************997 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.29
                 HHHHHHHHTTTSSHHHHHHHHHHHH CS
         Arm  13 avppLvrLLssedeevqeeAawALs 37 
                 av++ ++L++++ +++++ A ++L+
  KHJ30657.1 711 AVKITLDLIEHGYDGLRKGAIGTLW 735
                 788899******************8 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 2.3
                 HHHHHTTTSSHHHHHHHHHHHHHH CS
         Arm  16 pLvrLLssedeevqeeAawALsNL 39 
                  L++ L++ed e++ +Aa A++ L
  KHJ30657.1 928 LLLHRLDDEDGETKSNAAFAIGQL 951
                 4777778**********9888766 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 2.4
                 HHTTTSSHHHHHHHHHHHH CS
         Arm  19 rLLssedeevqeeAawALs 37 
                  LL++++ + + +A+++++
  KHJ30657.1 974 PLLNTQHSRSKDNAVGCIC 992
                 6999************996 PP

  == domain 6  score: -2.2 bits;  conditional E-value: 5.9
                  HHHHHTTHHHHHHHHT CS
         Arm    6 davieaGavppLvrLL 21  
                  d+v  + ++p+ ++LL
  KHJ30657.1 1000 DHVPIQEVLPAIIDLL 1015
                  66676779******99 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.41   3.5e+02       2      81 ..     178     265 ..     177     280 .. 0.59
   2 !    7.9   0.0    0.0054       4.6       2      49 ..     362     409 ..     361     438 .. 0.83
   3 ?    6.0   0.0     0.022        19      14      78 ..     469     534 ..     459     544 .. 0.84
   4 ?   -1.5   0.0       4.7     4e+03      47      79 ..     689     721 ..     686     731 .. 0.78
   5 !    8.4   0.0    0.0038       3.2       6      78 ..     902     977 ..     897     994 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.41
  Vac14_Fab1_bd   2 arkggligLaavaialekk....ikeyleeivkpvlkcfs.....DkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsd 81 
                    ar  +l+ L  vai le +    + +++++i + ++++++     D++ ++   a E +  +     + + k+++++++ ++++++ ++
     KHJ30657.1 178 ARINSLLCLSWVAIMLEPDehkaSFDCFNDIFPQMVNVLKvaiqeDHEGHI-MQAFEVFQTLLSCEPSLLNKHFKDLLNFMIEISSNTN 265
                    677889999999999987766665567777777666554322211333333.3455544444444444444577777777777777665 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0054
  Vac14_Fab1_bd   2 arkggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacE 49 
                    +r++g+++L  +  +    i + l+++++++l+ ++D+d  vR  a  
     KHJ30657.1 362 YRQAGILALGMCVEGAPDFICSQLDTLMPSILQLLHDSDISVRRAALN 409
                    6899999999999999999***********************977765 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.022
  Vac14_Fab1_bd  14 aialekk.ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklva 78 
                      +++k  i++y+ e+v+ + + +s +d  v+  a+ +l  ia  +++++l ++++   al++ ++
     KHJ30657.1 469 CRGISKIsIRNYITELVPRLGNLLSHSDLTVKSSAAGALGSIAESSEDAFLPYFETSMGALSQFLS 534
                    5556555599*********************************************99998888765 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 4.7
  Vac14_Fab1_bd  47 acEslyniakvakgevlkllneifdalvklvaD 79 
                    a+E l  ++  ++ +++ ++++  ++   l+  
     KHJ30657.1 689 AIEVLGDVMSHTRRNFMPYFEQAVKITLDLIEH 721
                    789999999999999999999998887777655 PP

  == domain 5  score: 8.4 bits;  conditional E-value: 0.0038
  Vac14_Fab1_bd   6 gligLaavai.alekkikeyleeivkpvlkcfsDkdsrvRyyacEslynia..kvakgevlkllneifdalvklva 78 
                    + +g+ a  i +++ ++++y++++++ +l+ ++D+d +++  a+ ++  ++   +a +e l+ +++if+ l  l+ 
     KHJ30657.1 902 AAVGVIAECIgNMGDSVTPYTKTLLTLLLHRLDDEDGETKSNAAFAIGQLVfhSTASSEYLSAFTTIFNKLEPLLN 977
                    3444444444157788**********************9988887776554226788999*********9987765 PP

>> RIX1  rRNA processing/ribosome biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1       1.2     1e+03      43     109 ..     118     186 ..      77     194 .. 0.69
   2 ?   -1.6   0.0       2.3     2e+03      98     116 ..     249     280 ..     206     285 .. 0.48
   3 !    8.5   0.0    0.0018       1.5      52     116 ..     353     416 ..     322     424 .. 0.87
   4 !   10.3   0.0    0.0005      0.43       7      99 ..     420     537 ..     414     559 .. 0.80
   5 ?    5.0   0.0     0.021        18      42     117 ..     880     955 ..     816    1076 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 1.2
        RIX1  43 vhklvtrilsLlqskspegrwaGvcLakvtveesgeellssgstWlrallsiLekpdp..pavlelais 109
                  ++l + + +   s++ + r +G+ ++ ++ e   e++  +   +++ l   ++ p++    + +l++ 
  KHJ30657.1 118 WTQLPSWLAQAATSEKTRHRETGLYIIYTLLEDAFEIFEDKLPDLFQLLNTTIKDPESaeARINSLLCL 186
                 445555666677788889999999999999999999999999999999999999996633444444444 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.3
        RIX1  98 p.............dppavlelaistlsrift 116
                 +             +  ++ e+ +++ls++++
  KHJ30657.1 249 HfkdllnfmieissNTNISSETRCQALSFLMQ 280
                 22222222222222335555555556666555 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0018
        RIX1  52 sLlqskspegrwaGvcLakvtveesgeellssgstWlrallsiLekpdppavlelaistlsrift 116
                 ++++ ++p+ r aG+  +++ ve  ++ ++s+  t++ ++l++L  +   +v ++a++ +sr+ +
  KHJ30657.1 353 EYVKNSNPKYRQAGILALGMCVEGAPDFICSQLDTLMPSILQLLHDS-DISVRRAALNGVSRLAD 416
                 6788999*************************************998.67888888888888876 PP

  == domain 4  score: 10.3 bits;  conditional E-value: 0.0005
        RIX1   7 nrLsstppkelpsilstlashkllceellkselee.........................lvhklvtrilsLlqskspegrwaGvcLakvtveesgeel 80 
                 + Ls+++++ +p +l+ l s + l+++ +++ +++                          +++lv r+ +Ll+ ++   +  ++  ++ ++e+s + +
  KHJ30657.1 420 EDLSKHHEQLIPILLKNLDSAGCLSDSSEAEVSKNldilksscgaidsvcrgiskisirnYITELVPRLGNLLSHSDLTVKSSAAGALGSIAESSEDAF 518
                 556666777777777777777777666666555557777777777777777777889999*************************************** PP

        RIX1  81 lssgstWlrallsiLekpd 99 
                 l + +t + al ++L+ +d
  KHJ30657.1 519 LPYFETSMGALSQFLSIKD 537
                 **************99884 PP

  == domain 5  score: 5.0 bits;  conditional E-value: 0.021
        RIX1  42 lvhklvtrilsLlqskspegrwaGvcLakvtveesgeellssgstWlrallsiLekpdppavlelaistlsriftl 117
                 l + +   i ++ +s+ +++r a+v ++   + + g+ +  + +t+l+ ll+ L  +d ++  ++a +  + +f+ 
  KHJ30657.1 880 LWKIFQKPIMKFASSQVNYERSAAVGVIAECIGNMGDSVTPYTKTLLTLLLHRLDDEDGETKSNAAFAIGQLVFHS 955
                 56667778999999999********99999999999**************99999996554444444444444443 PP

>> MMS19_C  RNAPII transcription regulator C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.4      0.57   4.9e+02     332     379 ..     120     166 ..      54     248 .. 0.55
   2 !   24.5   0.2   1.5e-08   1.3e-05     334     423 .]     348     436 ..     342     436 .. 0.93
   3 ?    2.2   0.0     0.091        78     359     413 ..     468     522 ..     463     526 .. 0.82
   4 ?    1.0   0.1      0.21   1.8e+02     275     309 ..     920     955 ..     917    1052 .. 0.68

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.57
     MMS19_C 332 tvlpklvegfkssdsetkenyLvALshllkhvPkslllpeLptLlPlL 379
                 ++   l +++ s++  ++e  L+ +  ll++   ++   +Lp+L+ lL
  KHJ30657.1 120 QLPSWLAQAATSEKTRHRETGLYIIYTLLEDA-FEIFEDKLPDLFQLL 166
                 33333333333333333333333333333222.223333333333333 PP

  == domain 2  score: 24.5 bits;  conditional E-value: 1.5e-08
     MMS19_C 334 lpklvegfkssdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdaevkastLetlksileespslvsehlssLvprLLkl 423
                 l+ l e +k+s+++ +++   AL + ++  P   + ++L tL+P +lq L+ +d +v++++L+ ++ ++++ ++ +s+h ++L+p LLk+
  KHJ30657.1 348 LKVLPEYVKNSNPKYRQAGILALGMCVEGAPD-FICSQLDTLMPSILQLLHDSDISVRRAALNGVSRLADDLAEDLSKHHEQLIPILLKN 436
                 6667788899******************9996.6679***************************************************95 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.091
     MMS19_C 359 llkhvPkslllpeLptLlPlLlqaLdlpdaevkastLetlksileespslvsehl 413
                 +++ ++k  + +++++L+P L + L+ +d +vk+s+   l si+e+s++++ ++ 
  KHJ30657.1 468 VCRGISKISIRNYITELVPRLGNLLSHSDLTVKSSAAGALGSIAESSEDAFLPYF 522
                 6666777778889999999999999999999999999999999998888877665 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.21
     MMS19_C 275 platelldkLlelLs.edaelgqlvakafgvlvsdd 309
                 p++++ll+ Ll+ L+ ed e+++ +a a+g lv  +
  KHJ30657.1 920 PYTKTLLTLLLHRLDdEDGETKSNAAFAIGQLVFHS 955
                 556666777777776677777777777776666443 PP

>> ParcG  Parkin co-regulated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   2.8e-05     0.024      76     142 ..     207     269 ..     191     301 .. 0.81
   2 ?    3.5   0.0     0.079        68      70     150 ..     377     454 ..     346     481 .. 0.80
   3 ?   -1.4   0.0       2.6   2.2e+03      72     136 ..     475     536 ..     457     565 .. 0.76
   4 ?   -3.0   0.0       7.6   6.5e+03     113     130 ..     913     930 ..     902     957 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.8e-05
       ParcG  76 pvlpklilplkeaLntrdeeviesaLkvlqklvkaseligeaLvpyyrqlLpvlnlfknkrvnlgdk 142
                 ++ p+++  lk a++  +e  i++a++v q l++++++    L+ +++ lL  +  +++++ n++ +
  KHJ30657.1 207 DIFPQMVNVLKVAIQEDHEGHIMQAFEVFQTLLSCEPS---LLNKHFKDLLNFMIEISSNT-NISSE 269
                 589*****************************888875...69********9987665544.55543 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.079
       ParcG  70 geekilpvlpklilplkeaLntrdeeviesaLkvlqklvkaseligeaLvpyyrqlLpvlnlfknkrvnlgdkidyrkkkn 150
                 + + i + l  l+  + + L+ +d +v  +aL+ +++l    +   e L  +  ql+p+l    ++   l+d+ + + +kn
  KHJ30657.1 377 APDFICSQLDTLMPSILQLLHDSDISVRRAALNGVSRL---ADDLAEDLSKHHEQLIPILLKNLDSAGCLSDSSEAEVSKN 454
                 5666788889999999999*******************...89999*************9865556666666666555444 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 2.6
       ParcG  72 ekilpvlpklilplkeaLntrdeeviesaLkvlqklvkaseligeaLvpyyrqlLpvlnlfknkr 136
                  +i + + +l+  l + L+++d +v  sa  +l  +    e+  +a  py+ + + +l+ f + +
  KHJ30657.1 475 ISIRNYITELVPRLGNLLSHSDLTVKSSAAGALGSI---AESSEDAFLPYFETSMGALSQFLSIK 536
                 567778999999999999999999999999999999...56666888899888887777776665 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 7.6
       ParcG 113 ligeaLvpyyrqlLpvln 130
                  +g++  py ++lL+ l 
  KHJ30657.1 913 NMGDSVTPYTKTLLTLLL 930
                 467889999999998764 PP

>> Dopey_N  Dopey, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       1.2     1e+03     217     231 ..      88     102 ..       7     130 .. 0.51
   2 ?    2.8   0.4     0.062        53     146     240 ..     148     253 ..     141     316 .. 0.70
   3 !    9.2   0.1   0.00068      0.58      90     149 ..     381     440 ..     371     481 .. 0.83
   4 ?   -1.1   0.0      0.91   7.8e+02     123     154 ..     596     628 ..     591     633 .. 0.84
   5 !   10.2   0.0   0.00034      0.29     103     170 ..     887     957 ..     872     983 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.2
     Dopey_N 217 klseeaeallspepg 231
                    ee+++++ +  +
  KHJ30657.1  88 CVLEEQKSTIRNLLS 102
                 333333333333333 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.062
     Dopey_N 146 Leeensevfertlklleklkekvge........kyfyqclwlaiirspsrRlgalkylskklpklkeveeeeekkekls...klseeaeallspepgll 233
                 Le+  + + ++  +l++ l++++++        + +    w ai+  p+   + + + +  +p++ +v +  ++++++    +  e  ++lls ep+ll
  KHJ30657.1 148 LEDAFEIFEDKLPDLFQLLNTTIKDpesaeariNSLLCLSWVAIMLEPDEHKASFDCFNDIFPQMVNVLKVAIQEDHEGhimQAFEVFQTLLSCEPSLL 246
                 5544444555667788888888888888888888899999************************99998877776533333355555666666666666 PP

     Dopey_N 234 vrallat 240
                  + +   
  KHJ30657.1 247 NKHFKDL 253
                 5544433 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00068
     Dopey_N  90 lskdlslylpGLlpllsyaslsvkpqlleliekyllpLgekLrpalkglilslLpGLeee 149
                 ++++l   +p +l+ll+ + +sv+   l+ + +   +L e+L    + li  lL  L+  
  KHJ30657.1 381 ICSQLDTLMPSILQLLHDSDISVRRAALNGVSRLADDLAEDLSKHHEQLIPILLKNLDSA 440
                 788999**************************************************9974 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 0.91
     Dopey_N 123 yllpLg.ekLrpalkglilslLpGLeeensevf 154
                  + +L  ++  p+l+g++ s++  L +++se+ 
  KHJ30657.1 596 TFAKLYeADFSPFLEGVVKSIFKSLTQDESELS 628
                 56677778999***************9999975 PP

  == domain 5  score: 10.2 bits;  conditional E-value: 0.00034
     Dopey_N 103 pllsyaslsv...kpqlleliekyllpLgekLrpalkglilslLpGLeeensevfertlklleklkekvge 170
                 p++++as +v   ++  + +i + + ++g+++ p +k l++ lL  L++e+ e ++++   + +l  +   
  KHJ30657.1 887 PIMKFASSQVnyeRSAAVGVIAECIGNMGDSVTPYTKTLLTLLLHRLDDEDGETKSNAAFAIGQLVFHSTA 957
                 8999999999666678999**********************************999887777766544444 PP

>> API5  Apoptosis inhibitory protein 5 (API5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.2    0.0003      0.26     310     382 ..       9     100 ..       3     119 .. 0.82
   2 !    8.4   0.2   0.00099      0.85      59     104 ..     387     432 ..     380     439 .. 0.85
   3 ?   -2.9   0.0       2.6   2.2e+03      54      81 ..     705     732 ..     701     734 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0003
        API5 310 lLle.ymplpk..eeeaeeeeelqftyvEclLyafhqLakkspnflns...............ednseklkdfreR.Lqylarlvqatikkl 382
                 lL+e  +p  +  +++++e  +  +t  E+lLy +h L+ ++++ +++                 n e+   freR Lq + +  ++ti+ l
  KHJ30657.1   9 LLKEvQIPNTQrvKAATSELRKNYYTQPESLLYLLHFLTSNEASEIRQlaavgatrlvdqhwsTLNDEQKSTFRERlLQCVLEEQKSTIRNL 100
                 44442244444656677777888899*****************999999*************999999********6689999999999877 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00099
        API5  59 kaidaqlDLiedddlgirkqAikdLpslckdtkeyvskiadiLaQl 104
                 + + + l L+ d d+++r++A+ ++ +l+ d  e +sk  + L  +
  KHJ30657.1 387 TLMPSILQLLHDSDISVRRAALNGVSRLADDLAEDLSKHHEQLIPI 432
                 5677899*****************************9977666555 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 2.6
        API5  54 PslaekaidaqlDLiedddlgirkqAik 81 
                     e+a+   lDLie    g rk Ai 
  KHJ30657.1 705 MPYFEQAVKITLDLIEHGYDGLRKGAIG 732
                 5556899***********9999*99995 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       4.6     4e+03     135     194 ..      43      99 ..      22     110 .. 0.63
   2 ?   -1.8   0.0       2.2   1.9e+03     100     166 ..     126     200 ..      94     224 .. 0.58
   3 ?   -2.3   0.1       3.2   2.7e+03      76     127 ..     234     284 ..     204     290 .. 0.70
   4 ?    3.1   0.0     0.071        61     173     196 ..     384     407 ..     356     417 .. 0.84
   5 !   11.5   0.0   0.00019      0.16      45     136 ..     875     966 ..     866     972 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 4.6
     CLASP_N 135 lsvalqdKnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanptVRe 194
                 l +++++   ++R+ +a   + l++++    s+l+ ++     e +l+++le  ++t+R+
  KHJ30657.1  43 LHFLTSNEASEIRQLAAVGATRLVDQHW---STLNDEQKSTFRERLLQCVLEEQKSTIRN 99 
                 4455555555556666666666666655...44444443445788888888888888886 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2.2
     CLASP_N 100 lkllgdtKkiisqnanqalaallsnas..fs...prilqvlsvalqd.KnvqpRe...ysaiwLkilltrfeshks 166
                  +   + K + ++++  ++ +ll++a   f+   p+++q+l++ ++d  ++++R+    ++ w++i+l+  e hk+
  KHJ30657.1 126 AQAATSEKTRHRETGLYIIYTLLEDAFeiFEdklPDLFQLLNTTIKDpESAEARInslLCLSWVAIMLEPDE-HKA 200
                 555555566666666666666665553222211144566666666663466666511245677777777666.333 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 3.2
     CLASP_N  76 llkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnasf 127
                 +++ l+  + + l +  + ll+ +++  +++ +i+s++  qal+ l+++++f
  KHJ30657.1 234 VFQTLLSCEPSLLNKHFKDLLNFMIEI-SSNTNISSETRCQALSFLMQATKF 284
                 555555555555666666666666664.555678888888888888887775 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.071
     CLASP_N 173 lldliekslkkgleDanptVReta 196
                  ld++++s+ ++l D++ +VR++a
  KHJ30657.1 384 QLDTLMPSILQLLHDSDISVRRAA 407
                 46999****************997 PP

  == domain 5  score: 11.5 bits;  conditional E-value: 0.00019
     CLASP_N  45 eelleclkqlleailkalssLrttlsstgchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnasfsprilqvls 136
                 +++ e++k +++ i+k +ss      s+++ ++ e++   ++++ p+ + ll++Ll +l d    + +na+ a+ +l+ + + s++ l+  +
  KHJ30657.1 875 SQFGELWKIFQKPIMKFASSQVNYERSAAVGVIAECIGNMGDSVTPYTKTLLTLLLHRLDDEDGETKSNAAFAIGQLVFHSTASSEYLSAFT 966
                 678888999999*****************************************************************999998877766555 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.47     4e+02       9      54 ..     130     175 ..     124     175 .. 0.89
   2 ?    9.0   0.2    0.0018       1.5       4      50 ..     392     438 ..     388     444 .. 0.94
   3 ?   -2.1   0.0         5   4.3e+03      19      53 ..     903     937 ..     888     954 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.47
     RTP1_C1   9 qdpllpvrahglvlLrkliekkskeavldiekilkllleaLkdeds 54 
                 +++    r  gl+ + +l+e+  +  + +++ +++ll +++kd++s
  KHJ30657.1 130 TSEKTRHRETGLYIIYTLLEDAFEIFEDKLPDLFQLLNTTIKDPES 175
                 6677778999************99999****************997 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0018
     RTP1_C1   4 alkdlqdpllpvrahglvlLrkliekkskeavldiekilkllleaLk 50 
                 +l+ l+d+ + vr  +l+  ++l+ +  ++  ++ e+++ +ll++L 
  KHJ30657.1 392 ILQLLHDSDISVRRAALNGVSRLADDLAEDLSKHHEQLIPILLKNLD 438
                 7999************************99**************996 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 5
     RTP1_C1  19 glvlLrkliekkskeavldiekilkllleaLkded 53 
                 ++  +++ i +   + +   +++l+lll+ L ded
  KHJ30657.1 903 AVGVIAECIGNMGDSVTPYTKTLLTLLLHRLDDED 937
                 55555555555555566667788888888888887 PP

>> Tti2  Tti2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.6       0.8   6.8e+02       5      58 ..      43     109 ..      39     247 .. 0.64
   2 ?    7.3   0.0    0.0035         3     115     157 ..     380     421 ..     361     438 .. 0.82
   3 ?   -3.6   0.0       7.2   6.1e+03     117     155 ..     477     515 ..     465     519 .. 0.70
   4 ?    3.5   0.0     0.052        45     193     274 ..     859     933 ..     856     979 .. 0.74

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.8
        Tti2   5 laaftdpedpwtteeaaqlatsileklls.....qeseefesilekiLk...sklrplfsk.....s 58 
                 l  +t++e + +++ aa  at++++++ s     q+s+ +e++l+ +L+   s++r+l+s+     +
  KHJ30657.1  43 LHFLTSNEASEIRQLAAVGATRLVDQHWStlndeQKSTFRERLLQCVLEeqkSTIRNLLSRvvaaiA 109
                 5555666666677777777777777777667666666666667777775222457777776543330 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0035
        Tti2 115 keieanwplivPpiLnllDdtdtsvKlrGlklLqtllekless 157
                   i +++  ++P iL+ll d+d+sv+  +l+ +++l + l ++
  KHJ30657.1 380 F-ICSQLDTLMPSILQLLHDSDISVRRAALNGVSRLADDLAED 421
                 4.5678999********************99999888777665 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 7.2
        Tti2 117 ieanwplivPpiLnllDdtdtsvKlrGlklLqtllekle 155
                 i +++  +vP + nll  +d +vK ++   L ++ e+ e
  KHJ30657.1 477 IRNYITELVPRLGNLLSHSDLTVKSSAAGALGSIAESSE 515
                 556666677777788888888888888887777766665 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.052
        Tti2 193 LraaYpallsLaklefaekskerrklldkilregilsglshasesprlvellleqlsevveelgistvkhLkrlipllseil 274
                 +++a+++++sL k+  +     ++ +l ki+++ i++  s + +++r  ++ +  ++e++ ++g s++ + k l+ ll + l
  KHJ30657.1 859 IDTAFDVIISLSKAIGS-----QFGELWKIFQKPIMKFASSQVNYER--SAAVGVIAECIGNMGDSVTPYTKTLLTLLLHRL 933
                 56777777777777775.....6777777777777664444334444..345567888888888888888888888776654 PP

>> HEAT_PBS  PBS lyase HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0084       7.2       1      26 [.     403     438 ..     403     439 .. 0.97
   2 ?    0.3   0.0         2   1.7e+03       1      14 [.     499     512 ..     499     520 .. 0.80
   3 ?   -1.9   0.0       9.8   8.4e+03       6      22 ..     908     930 ..     907     935 .. 0.63
   4 ?   -1.4   0.0       6.6   5.6e+03       4      12 ..     943     951 ..     941     952 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0084
                 HHHHHHHHHHHCTS..........GGGHHHHHHHCT CS
    HEAT_PBS   1 vRraAakaLgqlgd..........eeaipaLleaLq 26 
                 vRraA+ +  +l d          e+ ip+Ll++L+
  KHJ30657.1 403 VRRAALNGVSRLADdlaedlskhhEQLIPILLKNLD 438
                 9*********************************98 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 2
                 HHHHHHHHHHHCTS CS
    HEAT_PBS   1 vRraAakaLgqlgd 14 
                 v  +Aa aLg +  
  KHJ30657.1 499 VKSSAAGALGSIAE 512
                 6789******9976 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 9.8
                 HHHHHHCTS......GGGHHHHH CS
    HEAT_PBS   6 akaLgqlgd......eeaipaLl 22 
                 a+ +g++gd      +  + +Ll
  KHJ30657.1 908 AECIGNMGDsvtpytKTLLTLLL 930
                 788999*9977655444444444 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 6.6
                 HHHHHHHHC CS
    HEAT_PBS   4 aAakaLgql 12 
                 +Aa+a+gql
  KHJ30657.1 943 NAAFAIGQL 951
                 7******98 PP

>> Nitr_red_assoc  Conserved nitrate reductase-associated protein (Nitr_red_assoc)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.4   0.00019      0.16      29     100 ..      64     137 ..      56     148 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00019
  Nitr_red_assoc  29 klkLsqWqqlsqeerqaLve..lpceteeeikayreaLqelveekageeakeleieeepaWldeeevpeavqek 100
                     +l  ++W++l+ e+++++ e  l c  ee++++ r++L+++v++ a+   k+ + ++ p Wl +++ +e+ +++
      KHJ30657.1  64 RLVDQHWSTLNDEQKSTFRErlLQCVLEEQKSTIRNLLSRVVAAIANLDFKQGQWTQLPSWLAQAATSEKTRHR 137
                     56668***********99987789999************************************99999887665 PP

>> FlaF  Flagellar protein FlaF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       6.2   5.3e+03      43      95 ..     106     158 ..      84     167 .. 0.70
   2 ?   -1.5   0.0       2.9   2.5e+03      43      89 ..     403     449 ..     391     456 .. 0.76
   3 ?    6.3   0.0     0.011         9      54     113 .]     741     802 ..     730     802 .. 0.81
   4 ?    1.9   0.0      0.25   2.2e+02      48      87 ..    1043    1082 ..    1038    1102 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 6.2
        FlaF  43 elaeAlkfnrrlWtilaedlaspenplpeelRadlislglfvlketsevlaep 95 
                 ++++ l+f +  Wt l + la++     +  R+  +++    l+ + e+ +++
  KHJ30657.1 106 AAIANLDFKQGQWTQLPSWLAQAATSEKTRHRETGLYIIYTLLEDAFEIFEDK 158
                 45566777888888888888888877777777777777777777777766665 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 2.9
        FlaF  43 elaeAlkfnrrlWtilaedlaspenplpeelRadlislglfvlkets 89 
                  +++Al+   rl   laedl++  ++l + l ++l s g  +++  +
  KHJ30657.1 403 VRRAALNGVSRLADDLAEDLSKHHEQLIPILLKNLDSAGCLSDSSEA 449
                 567999999999999*****999999988887777776666665555 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.011
        FlaF  54 lWtilaedlas...penplpeelRadlislglfvlketsevlaepsekleaLIdinrniaaGL 113
                 lW ++ ++  +   p  pl ++   +l++lg+ v + t ++ ++++ + +++ dinrn+aa L
  KHJ30657.1 741 LWALMEDETGEkwtPGLPLKQKPSGELLKLGELVTTATVSLWEDET-NRAVVTDINRNVAATL 802
                 56666555555222455666777789*******************9.99***********976 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.25
        FlaF   48 lkfnrrlWtilaedlaspenplpeelRadlislglfvlke 87  
                  l+++ +l  i+a+ l +p n+l    R ++i    f+ ++
  KHJ30657.1 1043 LSQTAKLIPIFASVLGEPYNQLESPTRSKIIASIKFIAEK 1082
                  5677788889*******************99766666555 PP

>> Tn7_Tnp_TnsA_C  TnsA endonuclease C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       4.9   4.2e+03      26      51 ..      32      57 ..       7      59 .. 0.62
   2 ?    6.2   0.1      0.02        17      22      55 ..      71     104 ..      64     111 .. 0.88
   3 ?    3.7   0.1      0.12        99      22      63 ..     404     445 ..     393     455 .. 0.77
   4 ?   -0.0   0.0       1.7   1.4e+03      48      76 ..     926     954 ..     917     958 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 4.9
  Tn7_Tnp_TnsA_C 26 eeeleelaelllerlrenpdttlrel 51
                    +  ++e   +ll++l++n+ + +r+l
      KHJ30657.1 32 YYTQPESLLYLLHFLTSNEASEIRQL 57
                    33335555566667777776666666 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.02
  Tn7_Tnp_TnsA_C  22 ddlseeeleelaelllerlrenpdttlrellkel 55 
                     ++l++e+ ++ +e+ll+++ e++++t+r+ll+++
      KHJ30657.1  71 STLNDEQKSTFRERLLQCVLEEQKSTIRNLLSRV 104
                     567888889**********************987 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.12
  Tn7_Tnp_TnsA_C  22 ddlseeeleelaelllerlrenpdttlrellkelDkeysler 63 
                     + +  +  ++la+ l+e l++++++ +  llk+lD +  l+ 
      KHJ30657.1 404 RRAALNGVSRLADDLAEDLSKHHEQLIPILLKNLDSAGCLSD 445
                     44555677899************************9887765 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 1.7
  Tn7_Tnp_TnsA_C  48 lrellkelDkeyslergtsLplirhLlat 76 
                     l+ ll++lD+e++  +  + + i +L+++
      KHJ30657.1 926 LTLLLHRLDDEDGETKSNAAFAIGQLVFH 954
                     66799*********************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.94u 0.33s 00:00:01.27 Elapsed: 00:00:00.50
# Mc/sec: 6637.59
//
Query:       KHJ30658.1  [L=503]
Description: putative xaa-pro aminopeptidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-48  165.1   0.0    5.9e-48  163.3   0.0    1.8  2  Peptidase_M24  Metallopeptidase family M24
      8e-35  119.3   0.0    1.3e-34  118.5   0.0    1.4  1  AMP_N          Aminopeptidase P, N-terminal domain


Domain annotation for each model (and alignments):
>> Peptidase_M24  Metallopeptidase family M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.12   1.1e+03      56     112 ..      87     144 ..      42     164 .. 0.74
   2 !  163.3   0.0   6.6e-52   5.9e-48       3     208 ..     260     480 ..     258     481 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.12
                    GGGGGSTTTBCS.SSB--TTEEEEEEEEEEETTEEEEEEEEEECSSGSHHHHHHHHHH CS
  Peptidase_M24  56 genaavlhytpn.drvlkegdlvlidagaeydgyasDitrTvlvGkftpeqrelyeav 112
                    + ++ ++   p+ + v+ +   ++  +ga++++++ D  + +l G  +pe+  +++ v
     KHJ30658.1  87 NRRSKLCSSLPDnSIVISASSSLKYRSGAVFHEFHQDPNFLYLTGFNEPEAVAVIQKV 144
                    4455566665641444777788999999999999999999999986677766666665 PP

  == domain 2  score: 163.3 bits;  conditional E-value: 6.6e-52
                    HHHHHHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHTTTCEESSSSEEEEGGGGGSTTTBCSSSB--TTEEEEEEEEEEETTEEEEEEEEE.E CS
  Peptidase_M24   3 irkaariasaaleavleaikpgvterelaaeieattlkrhgarglafppivasgenaavlhytpndrvlkegdlvlidagaeydgyasDitrTv.l 97 
                    +  a++++  a++++++  ++  +e++l a+++++ ++ +g+++ a+ p+va g+na  +hy+ nd+ lk+g+l+l+dag+ey gy++Ditr + +
     KHJ30658.1 260 MYIAGQASGLAYTNAMR--RKWSKEKDLKAFLDYE-FQMNGCDKNAYVPVVAGGKNALSIHYVRNDDLLKDGQLILVDAGGEYGGYITDITRSWpV 352
                    67799999999999966..55667*********88.9*********************************************************99 PP

                    CSSGSHHHHHHHHHHHHHHHHHHHC-STTSB..HHHHHHHHHHHHHHT....TB.......CCGBSSCSEEEESSSSSEEEEEESSSTTCSSB--T CS
  Peptidase_M24  98 vGkftpeqrelyeavleaqeaaikavkpGvt..lseidaaarevlesa....gl.......akffphglGHgvGlevhdegpsvsresndgrklee 180
                    +Gkft+ qr+ly+avl++q+++ +++++ +   l+ei+a+a++ l+++    g+       +  fph++GH +Gl+vhd  p ++    +++kl++
     KHJ30658.1 353 NGKFTEPQRDLYDAVLQVQRNCNSLCRENAClsLDEIHAIAEKGLKENlqqlGFdmsgnaiGILFPHHTGHYIGLDVHDC-PGYP----RSTKLKA 443
                    99*************************865434*************9666664466666667799**************9.*888....489**** PP

                    TBEEEEEEEEEEET....TT......EEEEEBEEEEEE CS
  Peptidase_M24 181 GmvftiEpgiyfap....ge......ggvriedtvlvt 208
                    G+++tiE g+y +p    ++       g+ried + v+
     KHJ30658.1 444 GNCVTIEIGVY-VPsddeRWpkhfrdLGIRIEDSLCVQ 480
                    ***********.553444337777745******99986 PP

>> AMP_N  Aminopeptidase P, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.5   0.0   1.5e-38   1.3e-34       1     122 [.      85     205 ..      85     206 .. 0.95

  Alignments for each domain:
  == domain 1  score: 118.5 bits;  conditional E-value: 1.5e-38
                 HHHHHHHHHHHS-SSEEEEEE-----EEETTEE------HHHHHHH----SS-EEEEEE.SSEEEE...EEEE----HHHHHHH----HHHHHHHHHT- CS
       AMP_N   1 yaerRkrllealpensvvilaagkekyrsgdveypFrqnsdFlYltGfnepdavlvlek.eedkkehkstLfvprkdpekelWdGarlgleeakelfgv 98 
                 y +rR++l+++lp+ns+vi a+++ kyrsg v+++F+q+ +FlYltGfnep+av+v++k ++ + ++ ++Lfv++kd+ +e+W+Gar+g ++a ++f++
  KHJ30658.1  85 YSNRRSKLCSSLPDNSIVISASSSLKYRSGAVFHEFHQDPNFLYLTGFNEPEAVAVIQKvGS-STDYIFHLFVRPKDQLAEQWSGARSGEQAAIDVFNA 182
                 789******************************************************99644.6788******************************** PP

                 SEEEEGGGHHHHHHHHHTT-SE.E CS
       AMP_N  99 deaepidelesalakllkgsdktv 122
                 d+  +i++l + l+ l+++++  v
  KHJ30658.1 183 DKSGDINNLRKLLTPLISQASY-V 205
                 *************999998764.5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (503 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3513.99
//
Query:       KHJ30659.1  [L=693]
Description: putative g1 s regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      1e-42  145.3   0.0    3.1e-42  143.8   0.0    1.9  1  Dfp1_Him1_M  Dfp1/Him1, central region
    4.8e-20   71.4   0.4    8.2e-20   70.7   0.4    1.4  1  zf-DBF       DBF zinc finger
  ------ inclusion threshold ------
      0.078   12.9   0.5       0.28   11.1   0.0    2.2  3  DUF3854      Domain of unknown function (DUF3854)


Domain annotation for each model (and alignments):
>> Dfp1_Him1_M  Dfp1/Him1, central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.8   0.0   5.2e-46   3.1e-42       1     126 [.     270     402 ..     270     403 .. 0.95

  Alignments for each domain:
  == domain 1  score: 143.8 bits;  conditional E-value: 5.2e-46
  Dfp1_Him1_M   1 dilskArelkmkiWsleKlqrvLknllekdsekkkakaaakskaa........keeedLsqlLkneklyGpsdrdptakrkdlhyFkgpyvlveDleq 90 
                  d+l+kArel+mkiWsleKl+r+++ ++++d+ ++ ++  +++ +          +++dL+qlL+ne++yGpsdrd t+++k+l++F+gpy++++D+++
   KHJ30659.1 270 DVLYKARELGMKIWSLEKLERIINVMFDTDTGNNMNHGISSRIDPltsaisrlGRDRDLQQLLRNERMYGPSDRDLTVASKELYTFRGPYIYIYDIDE 367
                  9******************************999998877554448999**999******************************************** PP

  Dfp1_Him1_M  91 elrpiivreykkeakkekdgewPvlrsttegrcpFv 126
                  +++pi+vrey+k+++ke dg+wP++rs ++g+cpF+
   KHJ30659.1 368 KQKPIMVREYPKVLNKE-DGDWPQFRSVSNGKCPFI 402
                  **********9999999.*****************8 PP

>> zf-DBF  DBF zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.7   0.4   1.4e-23   8.2e-20       2      45 .]     633     676 ..     632     676 .. 0.97

  Alignments for each domain:
  == domain 1  score: 70.7 bits;  conditional E-value: 1.4e-23
      zf-DBF   2 ksGYCEnCrvkfedleeHlksekHrkFaenssnfeelDeliskl 45 
                 k+GYCEnC++kfed++eH+ s+kHrkFae+ +n+++lD+l+ +l
  KHJ30659.1 633 KPGYCENCQDKFEDFNEHVISRKHRKFAEKLDNWKALDALLTQL 676
                 8****************************************986 PP

>> DUF3854  Domain of unknown function (DUF3854)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   4.7e-05      0.28      42     103 ..     262     323 ..     243     337 .. 0.79
   2 ?   -3.8   0.0         2   1.2e+04      66      84 ..     353     371 ..     341     376 .. 0.70
   3 ?   -3.0   0.0       1.1   6.5e+03      20      30 ..     553     563 ..     528     594 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4.7e-05
     DUF3854  42 yreekdeegekiekk.klipeleklakegreiliaFDqDtkpktiknVraaikrlgklleerg 103
                 +r++ +++ +   k+ +l  ++++l k +r i ++FD+Dt +++ + ++  i  l++++++ g
  KHJ30659.1 262 KRQQGRSN-DVLYKArELGMKIWSLEKLERIINVMFDTDTGNNMNHGISSRIDPLTSAISRLG 323
                 44444433.34445559****************************999999999998887765 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2
     DUF3854  66 akegreiliaFDqDtkpkt 84 
                  +     +  +D D+k+k 
  KHJ30659.1 353 YTFRGPYIYIYDIDEKQKP 371
                 5555566778999999987 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 1.1
     DUF3854  20 kKaaallsagy 30 
                 kK +al+s+g+
  KHJ30659.1 553 KKILALTSQGL 563
                 44444444442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (693 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       893  (0.0498076); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 4974.38
//
Query:       KHJ30660.1  [L=147]
Description: putative ubiquitin-conjugating enzyme e2 8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-31  109.3   0.1    1.3e-31  109.1   0.1    1.1  1  UQ_con    Ubiquitin-conjugating enzyme


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.1   0.1   7.4e-36   1.3e-31      40     139 ..       4     104 ..       1     105 [. 0.96

  Alignments for each domain:
  == domain 1  score: 109.1 bits;  conditional E-value: 7.4e-36
                 STTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBE.TTSBB-CGGGSTTT--TTSHHHHHHH.HHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHH CS
      UQ_con  40 tpYeggvFklelefpedYPlkpPkvkfvtkifHPnvd.ksGevcldiLkeekWspaltlesvll.siqsLlaepnpesplnkeaakllkkdreeykkkv 136
                  p++gg++k+++e+p++YP+k+P++ fv++ifHPn+d  sG+vcld+++ ++Wsp+ ++ +++   + +Ll+ pnp++pln eaa+ll +++e y++kv
  KHJ30660.1   4 APFQGGIWKIHVELPDQYPYKSPSIGFVNRIFHPNIDeLSGSVCLDVIN-QTWSPMFDMINIFEvFLPQLLRYPNPTDPLNGEAAALLMREPESYDTKV 101
                 69***********************************99**********.55***********989********************************* PP

                 HHH CS
      UQ_con 137 key 139
                 key
  KHJ30660.1 102 KEY 104
                 998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1073.17
//
Query:       KHJ30661.1  [L=564]
Description: hypothetical protein EV44_g2903 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.08   13.1   0.0       0.27   11.3   0.0    1.9  1  DUF2634   Protein of unknown function (DUF2634)


Domain annotation for each model (and alignments):
>> DUF2634  Protein of unknown function (DUF2634)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.5e-05      0.27      19      50 ..     142     175 ..     126     177 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.5e-05
     DUF2634  19 kivdglEalkqwiykalkTeryryliYse..nYG 50 
                 +  d+ E lkq i+k+ +T++ +++ Ys+  ++G
  KHJ30661.1 142 VDEDEGEDLKQDIMKYSHTKKASHESYSSedEFG 175
                 34456799*******************8744565 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (564 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1215  (0.0677673); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3912.86
//
Query:       KHJ30662.1  [L=380]
Description: putative glycoside hydrolase family 16 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.2e-08   31.8   4.3    1.3e-07   31.2   4.3    1.3  1  Glyco_hydro_16  Glycosyl hydrolases family 16


Domain annotation for each model (and alignments):
>> Glyco_hydro_16  Glycosyl hydrolases family 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   4.3   7.5e-12   1.3e-07      19     176 ..     119     297 ..      83     298 .. 0.73

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 7.5e-12
                     T....SEEEEEEEE......EEEEEEEE.CCEESSEEEEEEEE---STTEEEEEEE...ETGGTSTTEEEEEEEETT-TTE.EEEEEE....BTT CS
  Glyco_hydro_16  19 g....etltltldk......esgsriks.kksflyGkvearikaaksaGvvtafyl...ssedekahdEiDiEflGndtgk.vqtnvy....gkG 94 
                     +    +++ +tl+       +s ++i++ ++++l+  v   ++   + G    f++     +d ++  E DiE+l   + + vq ++      +G
      KHJ30662.1 119 SpsdpKQTWMTLRTartpdfQSTAEIDTvTSNMLFLSVRYMARILGDPGACAGFFTylpPGSDPTTVQEADIEILTGAPVNyVQFTNQpsfdDQG 213
                     3333422333333355888777999999999999999999999999999999999964324669***********99888877777664423333 PP

                     BSGE....EEEEET.SS-TTTS-EEEEEEEETTEEEEEETTEEEEEEESSHHHHT.--EESEEEEEEEEEEBSHHHSSE-EEEEEEE CS
  Glyco_hydro_16  95 kgkr....ekrlsl.wfdptedfHtYaieWtpdkikfyVDgkpvrtltkkeaeevkyPqftpmkvavslwpgsdwateqgkvkidwa 176
                        +    +k+ ++ + +  ++++ + ++W p + ++yV+++ v +++ ++ + ++      m+   +lw g+ +  + + ++++w+
      KHJ30662.1 214 R--EllqaSKNTTVpKTNDYSQWNIWRMDWMPGQTSWYVNDVSVANISFQTPK-DPAGLIMNMWSDGGLWTGNMSVGQSAYMNVQWI 297
                     3..2455433333347888899*************************999776.53333345566788*****99999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2878.50
//
Query:       KHJ30663.1  [L=918]
Description: putative phosphatidylinositol 3-kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.7e-56  188.9   2.4    9.3e-56  188.2   2.4    1.3  1  PI3Ka           Phosphoinositide 3-kinase family, accessory d
    5.1e-45  154.2   0.0    1.5e-30  106.9   0.0    2.5  2  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
    6.3e-33  113.6   0.0    1.3e-32  112.6   0.0    1.6  1  PI3K_C2         Phosphoinositide 3-kinase C2


Domain annotation for each model (and alignments):
>> PI3Ka  Phosphoinositide 3-kinase family, accessory domain (PIK domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.2   2.4   1.6e-59   9.3e-56       2     171 ..     367     549 ..     366     562 .. 0.92

  Alignments for each domain:
  == domain 1  score: 188.2 bits;  conditional E-value: 1.6e-59
                 -S-SSCHHHHHHHHHCHS-TTS---HHHHHHHHHTHHHHCTSGGGHHHHHTTS-SSSHHHHHHHHHHHTT..SHHTTHHHHTTTTSTTS--HHHHHHHH CS
       PI3Ka   2 dlkpdekerdeleaiiakdPltkltaeekeliwkfryylknnkkaltklLqsvkwseesevkealellds..WaeididdaLeLLdskfkdesvreyav 98 
                 dlkp+ k rdel++iia+ P++ l  +ek+liwkfr+ l++nk+altk+ +sv+w+++se+ +a+++l s  W+e+d+ddaLeLL+++f ++ vr+yav
  KHJ30663.1 367 DLKPNAKVRDELNSIIAYAPTQILLPDEKDLIWKFRHHLTSNKRALTKFVKSVNWQDQSESRQAVQILSSskWTEVDVDDALELLGPTFDNPAVRAYAV 465
                 799*****************************************************************8777*************************** PP

                 HHHHHSHHHHHHHHHHHHHHHHGGS.........SSSSSHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCCTH..HHHHHHHHHH CS
       PI3Ka  99 kvLekasdeelllYllQLVqalkye.........pikdsalaefLlkralknkrlghfffWyLkseiedkev..serfkslles 171
                  +L+k +d+elllYllQLVqalk+e         + k+s l++fL++ra ++  lg+ f WyL +e++d++    + f++l+ +
  KHJ30663.1 466 DRLRKSDDDELLLYLLQLVQALKFEpiseqnkdeRLKHSSLTKFLIERATNSFMLGNYFHWYLMVECDDQSSsqGDGFRKLFAK 549
                 *******************************************************************66655114556666555 PP

>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.0   1.5e-15   8.8e-12       2      86 ..     660     736 ..     659     745 .. 0.89
   2 !  106.9   0.0   2.5e-34   1.5e-30     133     250 .]     751     864 ..     729     864 .. 0.91

  Alignments for each domain:
  == domain 1  score: 45.4 bits;  conditional E-value: 1.5e-15
                     EEEEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHHHH CS
  PI3_PI4_kinase   2 sagiykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekkgvpptasve 86 
                     +++i+k gddlrqd+l++q+++lmd++l+ken++++    l +y+++++  ++g +++v+s  +++s++++++   g p  a++e
      KHJ30663.1 660 YQIIFKTGDDLRQDQLVIQIISLMDQLLQKENLDLK----LSPYKILATCASAGAVQFVPS-VSLQSVVKKFK---GNPVLAYLE 736
                     899********************************9....********************6.79999999988...455555555 PP

  == domain 2  score: 106.9 bits;  conditional E-value: 2.5e-34
                     HHHHHHHHHHHHHHHHHHHHT-TT--TTTEEEETTTSEEEESSTTTCCTCSHCSSSS-.SSSSS.S-THHHHHHT..STTCCHHHHHHHHHHHHH CS
  PI3_PI4_kinase 133 earkqFvrslaklsvldyilgngDRhldNilvdktsgklihIDfGlilpdewkllpfpqekvPf.rltrelvlai..dpskdeglfresceeale 224
                     ea+++F+rs+a+++v++y+lg+gDRhldN+l+   +g+++h DfG+il++++k +       P  +l++e+v+ +   +s  +  f+++c++a+ 
      KHJ30663.1 751 EALETFTRSCAGYCVITYLLGVGDRHLDNLLL-APDGHFFHADFGFILGRDPKPFA------PAmKLCKEMVDGMggANSDYYAQFKQYCFTAYT 838
                     4599****************************.********************999......677**********999***************** PP

                     HHHHTHHHHHHHHHHHHHHHCCSSCT CS
  PI3_PI4_kinase 225 alrrdqnlltrllkkavkdglilwei 250
                     +lr+ +nl+++l++++v++++++++i
      KHJ30663.1 839 TLRKSSNLILNLFSLMVDANIPDIRI 864
                     **********************9875 PP

>> PI3K_C2  Phosphoinositide 3-kinase C2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.6   0.0   2.3e-36   1.3e-32       3     140 .]      52     214 ..      50     214 .. 0.95

  Alignments for each domain:
  == domain 1  score: 112.6 bits;  conditional E-value: 2.3e-36
                 SEEEEEEEEECTTEESSEEE.E-S-SETT.TTTEEEEEEEEEEECCCS-TTEEEEEEEEEEEECTC...EEE.-EEEEEEEESC-TTSCCGGCEEEEEE CS
     PI3K_C2   3 eklyvevqlyhggkqlclpvqstklksfsfksikwnewltfpiqisdLPrsarLvitiwevkgkeks..eev.eplgwvnlsLFdkkgiLrqGkqkLkl 98 
                 ++lyv+vq   + k+l+ pv +t +k+f+ +  +wnewlt+pi++s LP+s++L+it+w+++   ++  +   +p+g+++l++Fd++++L++G+qk +l
  KHJ30663.1  52 SELYVTVQPWADSKPLAVPV-QTAYKPFK-NERRWNEWLTLPINYSCLPLSTQLAITVWDLSPVGGEgaHGHaIPFGGTTLPMFDNENQLQKGRQKCYL 148
                 689*****************.*******9.*******************************977666664446************************** PP

                 CCS-----SHH.........................SSSCHCCCCCCCHTTSSS-CCCCHTTTCCC CS
     PI3K_C2  99 wtsketdgsvet........................edelnrlekllkkyergqvekvewldrltf 140
                    k +dg +et                         +e++rlekllkk+e g++ +vewld+l f
  KHJ30663.1 149 HRRKMADGLSETktpstlpksiridkdidgwnhdenAEEMDRLEKLLKKHEMGEIPRVEWLDQLVF 214
                 ***********************************99**************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (918 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.42
# Mc/sec: 6514.81
//
Query:       KHJ30664.1  [L=467]
Description: putative nuclear protein qri2 nse4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-32  110.9   0.0    7.1e-32  109.5   0.0    1.8  1  Nse4_C         Nse4 C-terminal
    3.9e-13   49.3   0.3    1.1e-12   47.9   0.3    1.8  1  Nse4-Nse3_bdg  Binding domain of Nse4/EID3 to Nse3-MAGE
  ------ inclusion threshold ------
      0.032   14.5   0.7       0.11   12.7   0.7    2.0  1  Syntaxin-18_N  SNARE-complex protein Syntaxin-18 N-terminus
       0.14   12.4   0.6        0.5   10.6   0.6    1.9  1  DUF2072        Zn-ribbon containing protein
       0.16   11.9   0.2         20    5.1   0.0    2.3  2  UPF1_Zn_bind   RNA helicase (UPF2 interacting domain)
       0.19   10.2   0.7       0.27    9.7   0.7    1.2  1  Peptidase_S64  Peptidase family S64


Domain annotation for each model (and alignments):
>> Nse4_C  Nse4 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.5   0.0   2.4e-35   7.1e-32       2      91 .]     363     451 ..     362     451 .. 0.93

  Alignments for each domain:
  == domain 1  score: 109.5 bits;  conditional E-value: 2.4e-35
      Nse4_C   2 islfkfvinpksFaqtVeNlFylSfLvkdgkvkieldedglpvleeteeeeeekakeeeakkkqavlsldmetWkelieafdikepliph 91 
                 islf+fvinp+sF+q+VeNlFy+SfL++dgk++++ld++g+p+le  +++e++ + +++++k+qavl ldm+ Wk+lie f+i+e +iph
  KHJ30664.1 363 ISLFNFVINPHSFGQSVENLFYVSFLIRDGKMAVSLDDRGIPYLE-LRDDEDSTRPDGQKRKHQAVLALDMASWKQLIEIFKIHETIIPH 451
                 99******************************************8.556666666667999***************************98 PP

>> Nse4-Nse3_bdg  Binding domain of Nse4/EID3 to Nse3-MAGE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.3   3.7e-16   1.1e-12       1      53 [.     171     239 ..     171     242 .. 0.84

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 3.7e-16
  Nse4-Nse3_bdg   1 DSrlLvsaSelaaekarnlklg..gggfDvdeFvsklktfMggdrfe..............gageeedd 53 
                    DS+lLv+a++l ++++ +  +g  g+g+D+d+ +s++k fM++   e              +++ +ed+
     KHJ30664.1 171 DSHLLVTAADLTYKRTVAIVSGdtGQGIDLDDLISRCKIFMRQGDDEratlhsqneriarnRDEGDEDN 239
                    9******************************************66668889998888887433333333 PP

>> Syntaxin-18_N  SNARE-complex protein Syntaxin-18 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.7   3.8e-05      0.11      31      75 ..      90     146 ..      67     165 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.8e-05
  Syntaxin-18_N  31 kkkrlkkskekd............eFikeAkeilkhItkLrkfLleirkaYlnvrsh 75 
                    ++++++++++ d            + i+e + i+k +++L+k Lle+r++Y+n  s+
     KHJ30664.1  90 EENPRQRRRTEDpednsdenydpdQDIEERRIIRKGLRDLNKNLLENRSEYMNPGSS 146
                    333333333333333333444455999999***********************9543 PP

>> DUF2072  Zn-ribbon containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.6   0.00017       0.5      49     113 ..      77     140 ..      58     146 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00017
     DUF2072  49 lvaeaeeeieevldaeeteeeklekkekekaekekeeedrvesvrilepGsYelNlekLlerdel 113
                  ++++++ +e++++++ ++++++e + +++++++ + ++ +e  ri+ +G  +lN + L +r e 
  KHJ30664.1  77 ETSRHKRPAEHIIEENPRQRRRTEDP-EDNSDENYDPDQDIEERRIIRKGLRDLNKNLLENRSEY 140
                 23333444788888777777776664.5666777788889***************9999998875 PP

>> UPF1_Zn_bind  RNA helicase (UPF2 interacting domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.011        32      68     148 ..     262     343 ..     250     346 .. 0.77
   2 ?    5.1   0.0    0.0066        20      94     132 ..     420     458 ..     414     463 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.011
  UPF1_Zn_bind  68 sknvflLgfipaksesvvvllcrepcasakslkdlnwdlsewqpliedrql.lswlvkv.pseeeqlrarkisakqiekleel 148
                   +   flLg ++++++ + +++ r+++ + ++lk+++ ++ + + +++d++l ls +++  +++ e++r ++i a+++e+l+++
    KHJ30664.1 262 CLPGFLLGPLSTEKKPKRTIV-RKTAFKINNLKESRPEVLREEDIVRDEDLnLSTMCQRiTTQLEKVRGEAIAAAELETLDDM 343
                   334599999998777777665.777999999****************99885677776537788999999****999999875 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0066
  UPF1_Zn_bind  94 asakslkdlnwdlsewqpliedrqllswlvkvpseeeql 132
                   +++k+++ l++d+++w++lie  ++ + ++   +e+e +
    KHJ30664.1 420 QKRKHQAVLALDMASWKQLIEIFKIHETIIPHREEQEIQ 458
                   5667778899*******************9888887765 PP

>> Peptidase_S64  Peptidase family S64
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.7   9.1e-05      0.27      81     213 ..      37     166 ..       3     211 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 9.1e-05
  Peptidase_S64  81 ssSlfSksrktystkqssaksssskakksssvakaedvgkplrvleteklts.lntvleeeeeskekseesesssseekessvkeleeesvekeLk 175
                    + S+ S      s ++ s+ ++++ +++        ++ ++ +  et++ +   ++++ee+ ++++++e+ e++s+e++   ++  e ++++k L+
     KHJ30664.1  37 TASIPSPISPVLSNRAYSNFNTEACGNRI-----PMSTRESFKASETSRHKRpAEHIIEENPRQRRRTEDPEDNSDENYDPDQDIEERRIIRKGLR 127
                    44555544444444444444444433333.....2333344445555555555889*********99999************************** PP

  Peptidase_S64 176 qLeedlaelmddinq.svinlskavieaieffkeFlese 213
                     L+++l+e  +++ +  +  l  ++++a ++ ++ ++++
     KHJ30664.1 128 DLNKNLLENRSEYMNpGSSGLEDTITQANNLTRQVKQTT 166
                    ******998888776245566666666666666655444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.37
# Mc/sec: 3746.98
//
Query:       KHJ30665.1  [L=365]
Description: hypothetical protein EV44_g3739 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2680.99
//
Query:       KHJ30666.1  [L=577]
Description: putative plasma membrane phosphatase required for sodium stress response [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-54  183.4   0.1    3.9e-54  182.7   0.1    1.4  1  NIF       NLI interacting factor-like phosphatase


Domain annotation for each model (and alignments):
>> NIF  NLI interacting factor-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.7   0.1   2.2e-58   3.9e-54       1     155 [.     408     569 ..     408     570 .. 0.93

  Alignments for each domain:
  == domain 1  score: 182.7 bits;  conditional E-value: 2.2e-58
         NIF   1 ktLVLDLDetLvhskleks.k...klkve..gekvevsvlkRpgldefLkelsklyevvifTasseeyaeavidildpekkllshrlyrescvkkkgey 93 
                 k+LVLDLDetLvhs+++   +   +++ve  g+ ++v+v+kRpg+def+k++ +lyevv+fTas ++y ++ +d+ld ++  ++hrl+resc+  +g+y
  KHJ30666.1 408 KCLVLDLDETLVHSSFKVLnQadfTIPVEieGQFHNVYVIKRPGVDEFMKRVGELYEVVVFTASVSKYGDPLLDQLDIHHV-VHHRLFRESCFNHQGNY 505
                 79*************95554477755555658889********************************************96.**********877**** PP

         NIF  94 vKdLsllgrdlsrvvivDdspdsfelqpengipiksffsdkkDneLlkllpllkela..kvddv 155
                 vKdLs +grdl++++i+D+sp+s+ ++p++++pi+s+fsd +DneLl+l+p+l++la  +v+dv
  KHJ30666.1 506 VKDLSQVGRDLRETIIIDNSPTSYIFHPQHAVPISSWFSDAHDNELLDLIPVLEDLAgaQVRDV 569
                 ********************************************************98777888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (577 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 4135.77
//
Query:       KHJ30667.1  [L=109]
Description: hypothetical protein EV44_g3935 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.057   13.2   0.1      0.062   13.1   0.1    1.1  1  PH_13     Pleckstrin homology domain


Domain annotation for each model (and alignments):
>> PH_13  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   3.5e-06     0.062      76     143 ..      40     107 ..      10     109 .] 0.80

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.5e-06
                 EE-SS-EETTSEEEE--SSS-.----EEEEEESSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTX CS
       PH_13  76 klYkkpiflnevlvkkpsdksdssekvlklsdidkvitlkaesanersaWvkkikeAsekyietekkk 143
                 + Y +  + ++vl+k  s+++d+ +k +  +++   i+   +   e++aWv + +e se+++ +e k 
  KHJ30667.1  40 QAYERREITEKVLIKGESNPADAMTKSVGCNQTLCNIISTNKYNLEKEAWVDRGEEKSENFVVNENKD 107
                 4566667789999***99999999999999999999999999999*****************999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 797.82
//
Query:       KHJ30668.1  [L=195]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0059   16.6   0.1      0.099   12.6   0.0    2.1  2  Ecotin    Ecotin


Domain annotation for each model (and alignments):
>> Ecotin  Ecotin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.013   2.3e+02      60     102 ..      16      59 ..       9      64 .. 0.80
   2 !   12.6   0.0   5.5e-06     0.099       3      58 ..     132     191 ..     130     193 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.013
      Ecotin  60 gysyyvvkkakklastlmacpdeakkekFvslgekell.rynsk 102
                  +++y  +ka+++  t ma  ++a +++F  l+e+ +  r++++
  KHJ30668.1  16 HVKFYGADKAEAPHRTWMAYFTKAPSSAFRVLDESGIArRFKKQ 59 
                 578999**************999999999888777766455555 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 5.5e-06
      Ecotin   3 apyPkaeegqkrhvielpkkedea....dykveliiGktlevdcnkqrlsGeleektleg 58 
                 + + +  e + + v+++++ e++a    ++ +el+  +++e+dcn+ +++++ +e++ +g
  KHJ30668.1 132 KTFRQVGEREYQAVLRVKAAEESAasaeKTNIELTSSQETEIDCNTDNVQASPTENSTSG 191
                 56667778888999999998886566779********************99988877666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1085  (0.0605165); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1399.88
//
Query:       KHJ30669.1  [L=448]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (448 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       818  (0.0456244); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3359.18
//
Query:       KHJ30670.1  [L=361]
Description: putative bax inhibitor family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-36  125.6  12.7    2.3e-36  125.6  12.7    1.5  2  Bax1-I    Inhibitor of apoptosis-promoting Bax1


Domain annotation for each model (and alignments):
>> Bax1-I  Inhibitor of apoptosis-promoting Bax1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.31   5.6e+03      93     112 ..      97     116 ..      88     124 .. 0.70
   2 !  125.6  12.7   1.3e-40   2.3e-36       1     207 []     137     353 ..     137     353 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.31
      Bax1-I  93 gaiilqaflltaaifgglsl 112
                 +++++q +++ +a+fgg  +
  KHJ30670.1  97 SGSLMQKLVVGGAMFGGTLI 116
                 56677777777777777654 PP

  == domain 2  score: 125.6 bits;  conditional E-value: 1.3e-40
      Bax1-I   1 raflrkvYgllalgllltalvaavvlsspaqlflslhivlflvvilaplalvflslsaarlkkkssala.lallllftlleGlslspillvytgaiilq 98 
                 r++l+ ++++++lg+++ +l a ++++s+  ++++ +    ++v++++l+l ++ ++a+r+++ ++ +a ++++ +f + +G++l+p+l+v+ +a+i++
  KHJ30670.1 137 RSYLNDTFLHTGLGIGIIGLSARAMFQSG--AMYRMMATSPWIVMIGGLGLSMGTMMATRATDPTNYVAkYGFWTAFNGTQGALLAPLLFVAPPALIAR 233
                 67999***********************9..8889989999************9*999999887777888***************************** PP

      Bax1-I  99 aflltaaifgglslyalttkrdls.glggflfagligliiaslvnlFlp.ssalelais.....ylgvllfsglilyDtqkiierageygee....dai 186
                 a l+t+ai+g++s++++t+k++ + +lgg l+ag   + +++l+ + lp   +  lais     y+g+ +f g++lyD+qk++ +a++ ++     da+
  KHJ30670.1 234 AGLYTMAIMGSISFVGATAKQEKYlYLGGPLLAGAALVAVSGLAPMVLPaTAVRTLAISenlwlYGGLAVFGGFTLYDVQKVLMHARMAQQGllrrDAV 332
                 *******************776666************************644445555788999******************9767665555******* PP

      Bax1-I 187 laalsLyldfinlFlslLril 207
                 + ++sL ldf+n+F+++++il
  KHJ30670.1 333 NESISLELDFLNIFVRVVQIL 353
                 *******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      217  (0.0121033); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2693.94
//
Query:       KHJ30671.1  [L=315]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       918  (0.051202); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2512.49
//
Query:       KHJ30672.1  [L=577]
Description: putative vacuolar protein sorting-associated protein vps17 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.7e-12   45.4   3.9    1.1e-11   44.7   3.9    1.3  1  Vps5      Vps5 C terminal like
    1.6e-11   44.2   0.0    3.8e-11   43.0   0.0    1.6  1  PX        PX domain


Domain annotation for each model (and alignments):
>> Vps5  Vps5 C terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   3.9   1.2e-15   1.1e-11      45     228 ..     282     465 ..     269     472 .. 0.96

  Alignments for each domain:
  == domain 1  score: 44.7 bits;  conditional E-value: 1.2e-15
        Vps5  45 kaiellvsqrkelasataelakslesLaslelskslsralsqlaeveerikellerqaeqdvltLgetideylrligsvksvfeqRvklwqkwqsaeqe 143
                 + ie lv+ rk l  a  +++  l s+   el+++l++a+ ++  + ++  ++++ q  ++  t+g  ++ + +    vk+ +++R  + +++ +a+q 
  KHJ30672.1 282 HKIEKLVKARKGLGFAESDFGVKLGSMHVQELHQGLANAYRKMGRTIQTTGDYHAAQGTAEATTIGDSMQYFSQDAFIVKETLTNRYIILRELLQAQQL 380
                 5699*********************************************************************************************** PP

        Vps5 144 lskkkeqleKlekaaksqqdklqqlkkeveelerkvqeaekeFeeisetikkElerFetervedfknvvekyLesaiesqkevie 228
                  + k +++++l++ +  +++k++++ + ++e+++   ++ ++  ++++++k E  r+ t  v ++k ++ +y    ie+++  + 
  KHJ30672.1 381 TRSKSAAVDRLKAGSSLRREKVDEAIAALDEAKSNESSLFQKSLRVTNNLKLEQRRWFTRTVVEMKLSIREYVAREIEAERRTLA 465
                 ******************************************************************************9988765 PP

>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.0   0.0   4.2e-15   3.8e-11      17     113 .]     131     229 ..     118     229 .. 0.84

  Alignments for each domain:
  == domain 1  score: 43.0 bits;  conditional E-value: 4.2e-15
                 SSEEEEEEEEEETTS....SSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHHTSCHHHHSHHHHHHHH CS
          PX  17 kkhsyylyevelktg....akewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrnsevlteFLe 111
                 +++++  + v+++       + + v+R +s+F++L ++L +  p+ ++P  P++ +       ++e  ++ +++L+++L++++ +p+l++++++  F+e
  KHJ30672.1 131 RRETILRFDVHTNLPkfrtTQFRDVRRTHSEFVKLADHLISSNPEAIVPAVPPALSSAG--IGTDEDEARVKASLQKWLNCVCANPVLMRDDEIILFIE 227
                 555555555555555666666689******************************98877..999999*******************************9 PP

                 SS CS
          PX 112 vs 113
                 ++
  KHJ30672.1 228 SD 229
                 85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (577 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4021.45
//
Query:       KHJ30673.1  [L=238]
Description: hypothetical protein EV44_g3451 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1826.94
//
Query:       KHJ30674.1  [L=320]
Description: putative tryptophanyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.7e-54  183.0   0.2    9.1e-54  182.7   0.2    1.1  1  tRNA-synt_1b  tRNA synthetases class I (W and Y)


Domain annotation for each model (and alignments):
>> tRNA-synt_1b  tRNA synthetases class I (W and Y)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.7   0.2   5.1e-58   9.1e-54      26     290 ..       1     272 [.       1     275 [. 0.91

  Alignments for each domain:
  == domain 1  score: 182.7 bits;  conditional E-value: 5.1e-58
                   HHHHHHHHH...TTSEEEEEEEHHHHHTTTTT-SSHHHHHHHHHHHHHHHHHHHHHTCHTTTEEEEETHHHHTTHHHHHHHHHHHTTCBHHHHHHHH CS
  tRNA-synt_1b  26 lkklvelqk...aghevffliaDlhAiigdpskaeerklrkreevlenaikaqlakgldpekaevvlqsewlehlelaellrdlgklgslnrmlqfk 119
                   + ++v+lq+   +  +++f +aDlhA++ +++   +  ++k++ ++ ++   +la+gld e+ ++++qs+    +el+++l++ ++lg l+rm+q+k
    KHJ30674.1   1 MINWVKLQEsenNDTKLIFSVADLHALTMPQK---PGNFKKARMQTLAS---MLAVGLDEERCTIFIQSQFGIVTELMWILSCTASLGYLSRMTQWK 91 
                   679999*99988999*****************...9*************...********************************************* PP

                   HCCHHCSS.S........C--BHHHHHHHHHHHHHHHHTCHSEEEEEGGGHHHHHHHHHHHHHHHHH..STTSS-EEEEET...-BBSTTSSSBTTC CS
  tRNA-synt_1b 120 svkkrlee.g........egislgeftYplLqaaDilllkadlvpgGsDQkqnielgrdlarrfnkk..evfkkpegltvp...lltgldGekKmSK 202
                   s k+ l++ +        ++ +lg+f+Yp+LqaaDil  +a++vp+G DQ q++e++r+ a  fn+    vf  pe+++ p   + ++++++ KmSK
    KHJ30674.1  92 S-KTGLNNpStlenstnsTKKKLGLFSYPVLQAADILIHRATHVPVGADQAQHLEFARECATNFNSAysPVFVRPETILSPtkrIKSLTNQKVKMSK 187
                   *.55566533566666666779*********************************************999*************9999999999**** PP

                   ETTC..GC-BTTCCHHHHHHHHHHCHCSTTCSHHHHHHHHHTHHHCHHHHHHHHCCSEEESSHHHHHHHHHCCCCHHHHHHHHHHHHHHH CS
  tRNA-synt_1b 203 Sagn..saIfLddekesvkkkiqkavtdsdeevekllklktelsnelierleavsgkkpkreaeellaeevtklvhggdlkkalaealne 290
                   S+g+  s+I ++d ke++++k+  a+tds+++v  ++++++e+ n l+++l+a+ + +   + +el+++ +++  + ++lk+ l+++++e
    KHJ30674.1 188 SSGSknSRILITDTKEEINEKFLGAITDSENRVSWDPEIRPEVAN-LLTILSAFDTLGR--SPQELAKSMEDM--KLRELKSLLSKSVEE 272
                   **9999***************************************.*******966654..558888888888..677788777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       809  (0.0451224); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 2540.75
//
Query:       KHJ30675.1  [L=211]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-57  194.3  11.8      3e-57  194.0  11.8    1.0  1  Egh16-like  Egh16-like virulence factor


Domain annotation for each model (and alignments):
>> Egh16-like  Egh16-like virulence factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.0  11.8   1.7e-61     3e-57       1     183 []      17     190 ..      17     190 .. 0.95

  Alignments for each domain:
  == domain 1  score: 194.0 bits;  conditional E-value: 1.7e-61
  Egh16-like   1 saHgvitkvtGangvngpglgvadgtprdgtsrasgsqaDttvfrdkeikkkkasglGrtlgsgkvniaaeiaklmagaesglptvsaggtltmtvhqv 99 
                 ++Hg+i+k++G+ g+ng+++g++ +tprdgt+r + +qaD t f++ +      +++G+tlg+g+++ ++++ak++ ++++glp+vsagg++ mt+hqv
  KHJ30675.1  17 AGHGAIVKAVGDMGGNGSAIGIDASTPRDGTRRTP-FQADSTRFKNVN-----PDACGETLGGGPNDPTSQVAKVA-QDSNGLPMVSAGGMIMMTLHQV 108
                 59****************************99655.********6555.....689******************99.789******************* PP

  Egh16-like 100 nqDGaGpltckiDststgtdakalqkaevtknvpGkgglsaakntdfplkvqlpagltCtGtvggaknvCivRceNaakaGPFG 183
                 n DGaGp++c+iDst+tgt+   ++k+ev +nvpGk+  s+ak+tdfpl++++ a++tCtG++gg++nvC+vRc+Naa+aGPFG
  KHJ30675.1 109 NGDGAGPYSCMIDSTGTGTG--GWTKMEVATNVPGKNSRSKAKATDFPLSAKIAADQTCTGSMGGMDNVCMVRCNNAANAGPFG 190
                 ***************99888..5789*********************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1616.48
//
Query:       KHJ30676.1  [L=97]
Description: hypothetical protein EV44_g5923 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.042   14.2   0.2      0.052   13.9   0.2    1.2  1  TYA       TYA transposon protein


Domain annotation for each model (and alignments):
>> TYA  TYA transposon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.2   2.9e-06     0.052       7      58 ..      19      70 ..      15      90 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.9e-06
         TYA  7 skevqtnqdpldvsaskleefdkastkansqqettpassavpenhhhaspqa 58
                sk ++ +q p +++as+l +++++ ++a++ ++t        en h+   ++
  KHJ30676.1 19 SKVIRPSQHPRALAASELSDYENSEAEAEASNDTHSNEEDEVENCHYSREKS 70
                899999****************************999999999999876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1288  (0.0718389); expected 358.6 (0.02)
Passed bias filter:                      645  (0.0359752); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 715.48
//
Query:       KHJ30677.1  [L=812]
Description: putative nitrogen response regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-15   56.7   2.1    2.7e-15   55.7   2.1    1.6  1  GATA      GATA zinc finger
    4.2e-06   26.5   2.3    6.2e-06   26.0   0.4    2.3  3  DUF1752   Fungal protein of unknown function (DUF1752)
  ------ inclusion threshold ------
       0.17   12.3   0.9       0.46   10.9   0.9    1.8  1  DUF4367   Domain of unknown function (DUF4367)


Domain annotation for each model (and alignments):
>> GATA  GATA zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   2.1   4.5e-19   2.7e-15       1      35 [.     659     692 ..     659     693 .. 0.98

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 4.5e-19
        GATA   1 CsnCgttkTplWRrgpdgnksLCnaCGlyykkkgl 35 
                 C+nC t +TplWRr+p+g + LCnaCGl+ k++g+
  KHJ30677.1 659 CTNCFTQTTPLWRRNPEGYP-LCNACGLFLKLHGV 692
                 ********************.************97 PP

>> DUF1752  Fungal protein of unknown function (DUF1752)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.4     1e-09   6.2e-06       5      27 ..     124     146 ..     123     147 .. 0.89
   2 ?   -3.6   0.0       1.8   1.1e+04      13      18 ..     210     215 ..     206     216 .. 0.75
   3 ?   -2.9   0.0       1.1   6.6e+03      11      20 ..     565     574 ..     561     575 .. 0.70

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 1e-09
     DUF1752   5 ytkkkkdlpngeRLENlSWRlWn 27 
                 y+  k +lpn+eR+ Nl+WR+++
  KHJ30677.1 124 YSDIKLNLPNQERMKNLTWRMMS 146
                 7777889***************7 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 1.8
     DUF1752  13 pngeRL 18 
                 pn+ RL
  KHJ30677.1 210 PNASRL 215
                 9999*9 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 1.1
     DUF1752  11 dlpngeRLEN 20 
                  l+n  RL N
  KHJ30677.1 565 ILENYSRLGN 574
                 5777778877 PP

>> DUF4367  Domain of unknown function (DUF4367)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.9   7.8e-05      0.46       3      53 ..     422     470 ..     420     533 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 7.8e-05
     DUF4367   3 eptylPeGykfkktnisedsesalleYkdengelisfs.iskqskeesqkls 53 
                  p+y P  +   ++n+s+ s+s+ ++Y++++++  +fs is+++  +s + s
  KHJ30677.1 422 DPQYNPQEF---QHNQSNLSDSIGIHYTNNKSSNPIFSpISMTNSTNSFSNS 470
                 599******...**************************77776655553222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (812 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.48
# Mc/sec: 5096.60
//
Query:       KHJ30678.1  [L=483]
Description: hypothetical protein EV44_g4366 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-09   36.9  16.4      1e-08   34.7  15.0    2.4  1  TCO89     TORC1 subunit TCO89
  ------ inclusion threshold ------
      0.079   13.1   3.4       0.17   12.1   3.4    1.6  1  CAF20     Cap associated factor


Domain annotation for each model (and alignments):
>> TCO89  TORC1 subunit TCO89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7  15.0   1.1e-12     1e-08     433     540 ..     251     391 ..      62     424 .. 0.65

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 1.1e-12
       TCO89 433 r................lskasedd...tsqtelndf.....ssFLksedvd.gdSRTQrKlllQResSilDlnsqnds..aeavflasn......iev 498
                                   sk  e+    +s  +l +f      sFL+s +++ g+SRTQ+K +lQR+sSi+   + +++  +e   +a+       + v
  KHJ30678.1 251 SnpssnaglsnflfnysTSKKVEELkrvQSMKDLSNFlpdedESFLHSYQLGaGQSRTQQKQWLQRASSIMEPKQLDTHygSEVGLFAGTkfegpiPRV 349
                 0333333333355544433333333000333444444222234777877886589****************988877763233334444323333368* PP

       TCO89 499 kreferisheYtnvrRfsnplaesLerisqsksiektqqkki 540
                 k ++ r s+eY   rRf++p+ ++L+ri q   ++ +++  +
  KHJ30678.1 350 KSILARTSTEYLVARRFHDPVGNALKRIAQIPGMDRNRRIPS 391
                 *****************************8877777776433 PP

>> CAF20  Cap associated factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   3.4   1.9e-05      0.17      49     118 ..      96     166 ..      48     194 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.9e-05
       CAF20  49 G.....ehgnersyhhlnrRRsSrsaakkPklkkkkavkvDedGwstlekkkkasfgeeaseekdkfresvaasa 118
                         +n++++ hl+r RsS +   kPk+    +    edGw+ ++++++  +++ +s   +k ++s+  ++
  KHJ30678.1  96 AstlslMRKNNNQHLHLKRNRSSAE--VKPKFAVGFELGDHEDGWEETSSSTSPAASRSNSRPTSKSQSST--TN 166
                 234445456677889999****999..59***999889999****98888877665555555555544443..22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (483 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       911  (0.0508115); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 3590.88
//
Query:       KHJ30679.1  [L=593]
Description: putative phosphoenolpyruvate carboxykinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   9.1e-211  700.5   0.0   1.1e-210  700.2   0.0    1.0  1  PEPCK_ATP  Phosphoenolpyruvate carboxykinase
  ------ inclusion threshold ------
       0.16   12.4   0.0       0.27   11.6   0.0    1.3  1  AAA_16     AAA ATPase domain
       0.16   12.1   0.0       0.29   11.3   0.0    1.4  1  AAA_33     AAA domain


Domain annotation for each model (and alignments):
>> PEPCK_ATP  Phosphoenolpyruvate carboxykinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  700.2   0.0  1.8e-214  1.1e-210       3     465 .]      79     545 ..      77     545 .. 0.99

  Alignments for each domain:
  == domain 1  score: 700.2 bits;  conditional E-value: 1.8e-214
                 EEES--HHHHHHHHHHTTS.-EE-TTS-EEE--TT--S--GGGEEEE--TTTTTTS-BTTTBEEE-HHHHHHHHHHHHHHHHTS.-EEEEEEEE-SSTT CS
   PEPCK_ATP   3 virnlsvaeLveealkree.gkltstgalvvetgkktgRspkdkfiVedeetedkiwWgkvnkpiseekfealkekvleylkek.elyvvdafagadpk 99 
                 +i n+sv++L+e+al  e+ + +tstgal++++g ktgRsp+dk+iV+++++e++iwWg vnkp++++ ++ ++e++++yl+++ ++yvvd++ag+d++
  KHJ30679.1  79 IIPNPSVPALYEDALVYETgSAITSTGALTAYSGVKTGRSPRDKRIVKEPSSENDIWWGPVNKPMTPDVWRINRERAIDYLNTRnRIYVVDGYAGWDKR 177
                 788**************99899**************************************************************9************** PP

                 T-EEEEEEES-HHHHHHHHHHSBGGS-S-TTT---SEEEEEETT----HHHH--SSS-EEEEETTTTEEEEES---THHHHHHHHHHHHHHHH.HTT-E CS
   PEPCK_ATP 100 yrlkvrviterawqalfvknllirpteeeleefepdftilnapefkadpekdglnsetvvalnlekklvlilgteYaGEikKsifsvmnyllp.kkgvl 197
                 y++kvrv++ ra++alf++n+lirp+ ++le+f+pd+ti+na++f a+++++g++s t+va+n+ +k+++ilg+eYaGE+kK+if+v+ y +p k+++l
  KHJ30679.1 178 YQIKVRVVCARAYHALFMHNMLIRPDPKDLEHFHPDYTIYNAGSFPANRYTEGMTSATSVAINFIAKEMVILGSEYAGEMKKGIFTVLFYEMPvKHNIL 276
                 *********************************************************************************************99**** PP

                 EEEEEEEE-T.TS-EEEEEE-TTSSHHHHH-BTTB-EEESSEEEE-SS-EEES-SEEEEE-TT--TTTSHHHHHHHSTT-EEES-EE-TTT--EETT-- CS
   PEPCK_ATP 198 smhcsanvgekkgdvalfFGLSGtGKTtLsadperkligdDehgwsdegvfniegGcYaKtidLskekepeiynairfgavlENvvldeetrevdfddt 296
                 ++h+san g k+gdv++fFGLSGtGKTtLsad +r+ligdDeh+wsd+g+fniegGcYaK+++L+kekepeiy ai+fg+vlENvv+++etr+vdf+d 
  KHJ30679.1 277 TLHSSANQG-KDGDVTVFFGLSGTGKTTLSADTNRSLIGDDEHCWSDHGIFNIEGGCYAKCVGLTKEKEPEIYGAIKFGSVLENVVFNPETRHVDFNDV 374
                 *********.677************************************************************************************** PP

                 SS-S--EEEEEGGGSSSB-TTSEE.--EEEEEEEE--TTS-S-SEEEE-HHHHHHHHHH-EEEE-----------EEEE-GGG-GGG-SS-HHHHHHHH CS
   PEPCK_ATP 297 slteNtrvaypiehienakeesva.ghpkniifLtadafgvlPpvskLtkeqamyhFlsGytakvaGtergvtepeatFsacfgapFlplhpteyaelL 394
                 +lteNtr+aypie+i+nak ++++ +hp+nii+Lt+da gvlPp+skL+k+q+m+hF+sGyt+k+aGte gv ep+atFs+cf++pFl+lhp++ya +L
  KHJ30679.1 375 TLTENTRCAYPIEFIPNAKIPCLSdNHPSNIILLTCDAHGVLPPISKLNKAQTMFHFISGYTSKMAGTEDGVIEPQATFSSCFAQPFLVLHPMRYAGML 473
                 **********************9989************************************************************************* PP

                 HHHHHHH--EEEEEE-SEESSSTTT.SEE--HHHHHHHHHHHHTTCCCTS-EEE-TTT--EEES-BTTC-GG CS
   PEPCK_ATP 395 aeklekhnakvyLvNtGwtggaygv.gkrislkatraiikaildgeleavefekdpvfglevptevpgvpse 465
                 aek+e+hn++++L+NtGw+g +    g+r++lk+trai++ai++  l +ve+e+  +f+l++p+++pgvpse
  KHJ30679.1 474 AEKIERHNSNAWLLNTGWVGASAASgGRRCPLKYTRAILDAIHSRALIDVEYETYGTFNLQIPKSCPGVPSE 545
                 *********************888779********************999********************86 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   4.4e-05      0.27      18      61 ..     281     333 ..     273     398 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4.4e-05
      AAA_16  18 rvrsgrp.elvllsGesGvGKsslvrellralekd.......ggif.lrgkcd 61 
                 ++++g    ++++ G sG+GK++l     r+l +d       +gif ++g c 
  KHJ30679.1 281 SANQGKDgDVTVFFGLSGTGKTTLSADTNRSLIGDdehcwsdHGIFnIEGGCY 333
                 4444444578999****************999999888888768887766664 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   4.8e-05      0.29       1      17 [.     290     306 ..     290     321 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 4.8e-05
      AAA_33   1 lvllvGlpGsGKstlae 17 
                 ++++ Gl+G+GK+tl+ 
  KHJ30679.1 290 VTVFFGLSGTGKTTLSA 306
                 6899***********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (593 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.39
# Mc/sec: 4524.30
//
Query:       KHJ30680.1  [L=425]
Description: hypothetical protein EV44_g2302 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-13   51.1   2.1    2.3e-13   50.2   2.1    1.4  1  MBOAT_2   Membrane bound O-acyl transferase family


Domain annotation for each model (and alignments):
>> MBOAT_2  Membrane bound O-acyl transferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   2.1   1.3e-17   2.3e-13       1      82 [.     235     323 ..     235     324 .. 0.85

  Alignments for each domain:
  == domain 1  score: 50.2 bits;  conditional E-value: 1.3e-17
     MBOAT_2   1 wpplfgslleay..slrrfWgrfWHqlfrrglkstakkilrlllg...sklarylqllvaFllSGllHaagdytqlap..estallfFl 82 
                 +p++ g++++ +  +l ++Wg  WHq+fr+g+++++++++++      s +a ++ l +aF +SG++H ag++t  a+  +s  +lfF+
  KHJ30680.1 235 YPSMWGPFSNLCykGLGGLWGNYWHQIFRQGFTAPTNYLIQKGYMkarSPTAMLVGLGFAFGISGFVHWAGSVTLYAKtyPSHLILFFA 323
                 789999998885569*************************998885644499999999******************9654444666775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       541  (0.0301746); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.36
# Mc/sec: 3526.21
//
Query:       KHJ30681.1  [L=678]
Description: putative bacterial alpha-l-rhamnosidase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.2e-16   58.4   0.5    2.9e-14   53.1   0.7    2.2  2  Bac_rhamnosid6H  Bacterial alpha-L-rhamnosidase 6 hairpin gly
    1.7e-09   37.3   0.0    4.2e-09   36.1   0.0    1.7  1  Bac_rhamnosid_C  Bacterial alpha-L-rhamnosidase C-terminal do
  ------ inclusion threshold ------
      0.019   14.9   0.0      0.044   13.8   0.0    1.6  1  Bac_rhamnosid    Bacterial alpha-L-rhamnosidase concanavalin-


Domain annotation for each model (and alignments):
>> Bac_rhamnosid6H  Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.012        69       3      27 ..     192     216 ..     190     219 .. 0.88
   2 !   53.1   0.7   4.9e-18   2.9e-14      31     247 ..     248     461 ..     245     474 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.012
                      -EEEEES-HHHHHHHHHHHHHHHHT CS
  Bac_rhamnosid6H   3 tgsfecsdpllnrlhenvlwsvrsn 27 
                       g+f+csdpll +++    ++ + n
       KHJ30681.1 192 KGYFSCSDPLLTEIWYSGAYTLQTN 216
                      599************9988888777 PP

  == domain 2  score: 53.1 bits;  conditional E-value: 4.9e-18
                      SB-S-SSSS----BHHHHHHHHHHHHHHB--HHHHHHHHHHHHHH--TTS--BSBSS--TT--B--TTTTTHHHHHHHHHHHHH--HHHHHHHH CS
  Bac_rhamnosid6H  31 vptDCPqrdErlgWtgdaqlfaptasylydveaflekwlrdladeqrengavptvaPevlgalsetaeWadaivivpwelyetygDkeilkkqY 124
                      v++D+ +r  r+ W gd ++ +p+  +  +    ++ +l+ l+  q++ng +p+  P++   + ++ +   +++i+  + +  ++Dk +l+ +Y
       KHJ30681.1 248 VYVDGSKR-DRTVWSGDLHVAVPSILVSTGDWDGVKTTLKILYAGQASNGELPFAGPKI--NIYNSDTYHMITLIASYDFFLWTNDKDWLESIY 338
                      89******.9************************************************8..67777788999********************** PP

                      H.HHHHHHHHHHHTSBT.TB.--S-S--STT.....-SS----HHHHHHHHHHHHHHHHHHHHHHTTS..--HHHHHHHHHHHHHHHHHHB.-T CS
  Bac_rhamnosid6H 125 e.smkryldylkqrsddgleelskfqlgDWldpeardgaaktekalvataylvrslklvakiaellgkeedakkyaalaeelkaafnkkyldse 217
                      e + k+ +d ++++ d+    l  ++  DW   +  +g  +t+    a+  ++++l ++++ia++++ +++a+ +++la+ l++  n++ +ds+
       KHJ30681.1 339 EnKYKKAMDFITNKVDK-TGMLFVTDKEDWGRLS--QGGYNTQ----ANLLFYKVLVTASQIARWMNDTAQASVWSNLATILQRSVNENNFDSN 425
                      83578999999998888.6689999******555..3444444....66789****************************************** PP

                      TS-BTT--.......HHHHHHHHHTT-S-GGGH.HHH CS
  Bac_rhamnosid6H 218 tgsvandt.......qtanalpLafglvpeaeraakv 247
                       g ++n         q an+l+L  +    +++ a++
       KHJ30681.1 426 YGAYKNTNedgsiypQDANSLALIYNFSTPDNN-ARI 461
                      **9999887888888999999998887743333.555 PP

>> Bac_rhamnosid_C  Bacterial alpha-L-rhamnosidase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.0   7.1e-13   4.2e-09       1      68 [.     571     637 ..     571     640 .. 0.94

  Alignments for each domain:
  == domain 1  score: 36.1 bits;  conditional E-value: 7.1e-13
                      --EECCGGGTEEEE----BTTB-EEEEEEEETTEEEEEEEEEETTEEEEEEEE-TT-EEEEEEE-SSG CS
  Bac_rhamnosid_C   1 GirpsepGfkkiviaPkpggdlksvkasfeslyGkikvdWkredgkftlnvsvPanttaeVvLpgeke 68 
                      G+  ++pG +++ i P++g+ l++++a f ++ Gk++++W++ +g f+l+ ++P +tt e+ +p + +
       KHJ30681.1 571 GLTLTTPGGQNWAICPQFGD-LTFAEAGFSTPLGKFSSKWSLVEGGFQLSWDMPIETTGEIFIPMTSK 637
                      6677899***********99.*******************************************8876 PP

>> Bac_rhamnosid  Bacterial alpha-L-rhamnosidase concanavalin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   7.3e-06     0.044       6      55 ..      78     141 ..      75     171 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 7.3e-06
                    TEEEEEEEEEEEEEEEEEE---TT-EEEEEEESEE-..............TTS-EE-GGGTT-- CS
  Bac_rhamnosid   6 gttvlDlGqnlaGvirlkvkgeeGtevklrfgEvLe..............ddgevdtrnlrkak 55 
                    +++++D+G+++ G++ ++ + ++ ++++l f+E+ +              +dg++ t+   +++
     KHJ30681.1  78 SQLIFDFGKEVGGILTITYNSTKESTLNLAFSEAKNwigewsddsngsfnPDGALTTNVTATRE 141
                    679******************************9887777777766666666666544444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (678 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.37
# Mc/sec: 5441.84
//
Query:       KHJ30682.1  [L=316]
Description: putative cytochrome c1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-94  315.3   0.0    2.6e-94  315.0   0.0    1.0  1  Cytochrom_C1     Cytochrome C1 family
  ------ inclusion threshold ------
      0.015   15.6   0.0      0.032   14.5   0.0    1.6  1  Cytochrome_CBB3  Cytochrome C oxidase, cbb3-type, subunit III


Domain annotation for each model (and alignments):
>> Cytochrom_C1  Cytochrome C1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  315.0   0.0   2.9e-98   2.6e-94       1     218 [.      77     295 ..      77     296 .. 0.99

  Alignments for each domain:
  == domain 1  score: 315.0 bits;  conditional E-value: 2.9e-98
  Cytochrom_C1   1 wsfegifgkfDkaqlqRGlqvykevcsaCHslklvafrnLaelglteeevkalaaeyevkdgpddegemfeRpgkpaDklpspyaneeaaraangga 97 
                   w++e++ ++fD+++l+RG+qvy+evcs+CHsl++v +r+L+++++t +e+kala+e+e++++p+d+ge ++Rpgk++D+lpspy+n+eaaraan+ga
    KHJ30682.1  77 WEHEKWHKTFDHQALRRGFQVYREVCSSCHSLSRVPYRSLVGVTHTVDEAKALAEENEYDTEPNDQGEIEKRPGKLSDYLPSPYKNDEAARAANNGA 173
                   99*********************************************************************************************** PP

  Cytochrom_C1  98 lppDLsllvkArkggadYiyslLtgY.eeppagvevkegqyyNkyfpggviamakpLsdgqveyedgtpatveqmakDvtaFLaWaaepklearkkl 193
                   lppDLsl+vkAr+gg +YiyslLtgY +eppagv+v++g+++N+yfpg+ i ma++L ++ v+yedgtpat++qmakDv++FL+Waaep+++ rkk+
    KHJ30682.1 174 LPPDLSLIVKARHGGCNYIYSLLTGYpDEPPAGVKVQDGLNFNPYFPGTGIGMARVLYNDLVDYEDGTPATTSQMAKDVVEFLNWAAEPEMDVRKKM 270
                   **************************667999***************************************************************** PP

  Cytochrom_C1 194 glkvilfllilavllylvkrkiwak 218
                   g+kvil+ ++l +l+++vkr +wa 
    KHJ30682.1 271 GVKVILISTVLFALSIWVKRYKWAP 295
                   ***********************96 PP

>> Cytochrome_CBB3  Cytochrome C oxidase, cbb3-type, subunit III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   3.6e-06     0.032       2      19 ..      90     107 ..      89     147 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.6e-06
  Cytochrome_CBB3   2 aaaaGaalykknCasCHg 19 
                      a+++G ++y++ C+sCH 
       KHJ30682.1  90 ALRRGFQVYREVCSSCHS 107
                      6899*************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       583  (0.0325172); expected 358.6 (0.02)
Passed bias filter:                      553  (0.0308439); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2399.60
//
Query:       KHJ30683.1  [L=287]
Description: putative gpi anchored cell wall protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       350  (0.0195214); expected 358.6 (0.02)
Passed bias filter:                      177  (0.00987227); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 2239.17
//
Query:       KHJ30684.1  [L=1555]
Description: putative glycogen debranching enzyme [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   4.9e-172  572.9   0.5   6.6e-172  572.5   0.5    1.1  1  hDGE_amylase   Glycogen debranching enzyme, glucanotransferas
   9.1e-115  383.6   0.0   1.7e-114  382.7   0.0    1.4  1  GDE_C          Amylo-alpha-1,6-glucosidase
    3.5e-88  295.5   0.0    1.1e-87  293.9   0.0    1.9  2  hGDE_central   Central domain of human glycogen debranching e
    9.1e-30  102.6   0.0    2.2e-29  101.4   0.0    1.7  1  hGDE_N         N-terminal domain from the human glycogen debr
  ------ inclusion threshold ------
      0.025   14.2   0.0      0.072   12.6   0.0    1.8  2  Alpha-amylase  Alpha amylase, catalytic domain


Domain annotation for each model (and alignments):
>> hDGE_amylase  Glycogen debranching enzyme, glucanotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  572.5   0.5  1.8e-175  6.6e-172       3     440 .]     141     584 ..     139     584 .. 0.91

  Alignments for each domain:
  == domain 1  score: 572.5 bits;  conditional E-value: 1.8e-175
                   E-TTS-EEEEE-GGGS-.SHHHHHHHHHHHHHTT--EEEES--EEE-TT--TTSEEEEEEE-TTT-.....SSC.HHHHHHHHHHHHHH--EEEEEE CS
  hDGE_amylase   3 lpldslsiqtvlskllG.pleeWekvlkeikekgYnmiHftPlqelGesnSpYSiadqleldkelfeekdkeekeedveklvkklekeygllsltDv 98 
                   +p+d+l+i+t+ +k++G  +++W+k+l+ i+e+gYnmiHftPlq +G+sn pYSi+dql++d+ +f     +++ +d+++l++++e++ygll ltDv
    KHJ30684.1 141 IPQDALCIFTLTAKFMGrFPKDWDKHLAGISERGYNMIHFTPLQYRGASNCPYSIYDQLSWDPLIF-----PNEDRDIQELLNSMETKYGLLGLTDV 232
                   89***************6679*********************************************.....88899********************* PP

                   --SEEETT-CCCCC-GGGS--TTT-GGGHHHHHHHCCCCTCCCHCCTSSS-SS---HCHHHHHHHHHHHHTCGGCTTGTTTS--CHHHHHHHHHSTT CS
  hDGE_amylase  99 VlnHtannskwleehPeagYnletaPhLepAleLdkallefskeleklglpteikseedlekvmealkeevleklklweyyvvdvekeveelkeale 195
                   V+nHtanns+w++ehPeagYn++taP+L++Al Ld++llefs++l++ +lpt ++s++dl+k+m+alke+v++k++lweyy++d+e++++e+ e+++
    KHJ30684.1 233 VWNHTANNSEWIQEHPEAGYNVSTAPWLRSALDLDNELLEFSSNLASNNLPTILTSTQDLTKIMSALKENVIHKIRLWEYYIIDIERAADEAIEHWK 329
                   ************************************************************************************************9 PP

                   SS----S.....S---..-TT..SHHHHHH.HHHHHS-SSTTS--STT---B-HHHHHHHHHHHT-SS.TTT.......THHHHHHHHHHHHHHHHH CS
  hDGE_amylase 196 esekkek.....lelkeelkea.slkeeak.lvkekalkeakkllerfsakidlevaaallkalleeekkee...eeeeevaeklkkildelNlely 282
                   +s+ k +     +++ +++ ++ s k +++ l+ +  l ++++llerfs++id++ aaallk+ +++ ++e+    + +++   +  i +e+Nl+ly
    KHJ30684.1 330 NSNIKFAkinleENFCKQIYNNsSSKAQISsLLFNGFLINKEILLERFSRRIDPNAAAALLKSRFGQFERENpnlIDLNTARIFILGIFEEVNLQLY 426
                   8865555566664444444444344444441444444999***********************99554444400044555566677899******** PP

                   HHHHHHHHHHHHHHHHHHHHHCS-SSS-------SSS-SS--SEEEE......E-TTSSEEEEEEEEE-TT--TTS-TTSTT--TTTTT--EEECCE CS
  hDGE_amylase 283 keldedvkaileqllnrikYerldekgPklgeitkkeplverYFtrlekeestkekdkkklalannGWvwgadplkdfaskeskaYLrRevivWgDc 379
                   +e+d+dv++il+q++nr+kY+rld++gPkl  i +k+plve+YFtrl+++++t ++++++l+l+nnGWvw++++l d+a+++s+aYLrRevivWgDc
    KHJ30684.1 427 QEYDKDVAQILDQIYNRVKYMRLDDHGPKLAIIDEKNPLVETYFTRLPRNDNTMQQKQEDLSLVNNGWVWNGNALIDNAGPKSRAYLRREVIVWGDC 523
                   ***********************************************99999999999*************************************** PP

                   EEB---SSGGGSHHHHHHHHHHHHHHHCCSSEEEETTGGGS-HHHHHHHHHHHHHH-TT-E CS
  hDGE_amylase 380 vKLrYGkkpedspfLWehmteYtellAkifeglRiDNcHStPlhvaeylLdeaRkvrpdly 440
                   +KLrYG++pedsp+LWe m++Yt+++Ak+f+g+RiDNcHStPlhvaeylLdeaR+vrp+l+
    KHJ30684.1 524 IKLRYGDRPEDSPYLWELMARYTRKMAKYFTGFRIDNCHSTPLHVAEYLLDEARRVRPNLF 584
                   ***********************************************************95 PP

>> GDE_C  Amylo-alpha-1,6-glucosidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  382.7   0.0  4.7e-118  1.7e-114       3     382 ..    1068    1543 ..    1066    1544 .. 0.94

  Alignments for each domain:
  == domain 1  score: 382.7 bits;  conditional E-value: 4.7e-118
       GDE_C    3 sdqflvrrkseslkeeekgvsliAGlpwFs....d.WGRDtfIaLsGllLvtgrfeeAreilltFaktlrhGliPNlldegqealyntvdaslwlie 94  
                  s+q +++ k+ sl +++ ++sl+AGlp+Fs    + WGRD+fI+  Gl L tgr+ e ++++l+Fa+ ++hG+iPNll++g +++yn++da++++++
  KHJ30684.1 1068 SIQQIGYVKTGSLYPNKLVPSLAAGLPHFSvewaRcWGRDVFISATGLFLGTGRYTECKDHILAFASVMKHGMIPNLLSSGVNPRYNARDAIWFFLQ 1164
                  7888999999999********************978************************************************************* PP

       GDE_C   95 aiekYleyagd.aeil.....rriyp......................vlqeilqkyvqGtky....................kigldeedglisag 143 
                  +i++Y++++++  e+l     rr +p                      ++qe+lq++++G+k+                    +i++d+++g++++g
  KHJ30684.1 1165 CIQDYVNIVPSgLELLkesvsRRFLPyndtyfnvddprayscsssleeIIQEALQRHAAGIKFreanagpeldsqmlsngfnqNIYVDWNNGFVFGG 1261
                  ***********999996666444444*********************************************************************** PP

       GDE_C  144 erlnqlTWmD.......akvkgepvtPRdGkaveinaLwyaaLkileelaekalge..........akkssykelaekikesfekkF...wdeaa.. 218 
                  ++ n++TWmD       a++kg p+tPRdG+++ei +L ++++ +l++l e+   +          ++  +yk +a+ +k +f++ +    ++++  
  KHJ30684.1 1262 NQDNCGTWMDkmgesekAGSKGVPATPRDGAPIEITGLLFSTITWLSRLHETGDYQyagvsvssssNNFITYKDWASLLKTNFDTCYfipTNSSEdk 1358
                  ***************************************************776669******98878899**************997874433377 PP

       GDE_C  219 ......aavakreilaDvlkssee.kdlslRpNflialslapellseekakkvlekaeeeLltplGlktLdpedpeYkgnYdgsedsrdaa...... 302 
                        +++++r+i++D+++s +e +d++lRpNf ia+++ap+l++++ka ++l +a++ L++p+G+ tLdp+d +Y+++Y++seds+++       
  KHJ30684.1 1359 nydvnsELINRRGIYKDIYRSGKEyEDYQLRPNFPIAMTVAPTLFEPKKALHALMIADKVLRGPVGMATLDPSDLNYHPYYNNSEDSENFStskgrn 1455
                  8888889**********************************************************************************99999*** PP

       GDE_C  303 YHqGtvWvwllgsyveallkfgeklgkskea.........leevkalLeglekhleeaglgslsElfdgdaellpkgciaQAWSvaell 382 
                  YHqG++Wvw+lg++++a lkf     +++ +         +++v+ +L g ++ +  +++++l+El+++ ++++ +++++QAWS ++l+
  KHJ30684.1 1456 YHQGPEWVWPLGYFLRAILKFDLM-RRQCDNegeqamteaFQQVTRRLIGCKTAIRVSPWAGLTELTQKGGDFCHDSSPTQAWSAGCLI 1543
                  ********************9864.333333456688888999********************************************98 PP

>> hGDE_central  Central domain of human glycogen debranching enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.7     6e+03      96     191 ..     647     683 ..     635     699 .. 0.55
   2 !  293.9   0.0     3e-91   1.1e-87       1     253 []     749     993 ..     749     993 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.7
                   --SSEE----EEEE.E----EEEE.......ETTTEEEEE--.S---SSEEEEEEEEETT--STHHHHHCSSHHHHCTT--TTHHHHHH--BHHHH CS
  hGDE_central  96 kdekfinGlpsklkeelkleevkvlkieevedeeeesvievefenfppGsvvvfetelsevdekldefakselkealsklslvdlnvvLyrceeEE 191
                    +++f+nG +s                                                           + l+e ++++ l+ +n+++  c + +
    KHJ30684.1 647 AKSNFVNGANS-----------------------------------------------------------DSLRESVQRIRLTPVNALFMDCTHDN 683
                   33444444444...........................................................44555555555555555555555554 PP

  == domain 2  score: 293.9 bits;  conditional E-value: 3e-91
                   TTHHHHHHHHHHHHHHHTT--SEEEEEE.ETTEEEEEEEETTTSEEEEEEEE--S..S--.-.------EEECTEEEEEEEEEEEEE-S.....-.- CS
  hGDE_central   1 GIikakklLnklhkelakegfdevhvdqleediitvtRvnpkthesvvliartaFskpksskeekklkpiklsgtikevlleaslevksk...keey 94 
                   GI+++kklLn++h+ ++k+ +de+h+++ e+++itv+Rv+pk++++++lia+taF  p+++++++ ++p++lsgt++++l ++ lev+s+    +e+
    KHJ30684.1 749 GIGEIKKLLNQIHSLMGKDRYDETHIHH-EDQYITVHRVHPKSRKGYFLIAHTAF--PGYGNGNGGFSPVHLSGTKARHLGSWMLEVDSSdetIKEV 842
                   9***************************.**************************..8889999************************997886789 PP

                   ---SSEE----EEEE.E----EEEE.......ETTTEEEEE--.S---SSEEEEEEEEETT--ST..HHHHHCSSHHHHCTT--TTHHHHHH--BHH CS
  hGDE_central  95 kkdekfinGlpsklkeelkleevkvlkieevedeeeesvievefenfppGsvvvfetelsevdek..ldefakselkealsklslvdlnvvLyrcee 189
                    +d+ +++Glpsk+  +l   +++v        + ++++i+v+ ++fppGs+++fet+++e++++  ld+f+ +++k+a+s+++l+dln+++yrce+
    KHJ30684.1 843 LNDKYYLRGLPSKVI-NLPGVRIEV--------KLNDTIITVR-DKFPPGSIALFETWVPEAEHTigLDTFVCNGAKSAFSEVDLIDLNYIMYRCEA 929
                   99999**********.999999999........226789****.******************99999****************************** PP

                   HHHHHCTTS--S--BTTTB--SCSSHHHHHHHHHHHHHCT-TTSHHHHHHHH-SHHHHHHHHHG CS
  hGDE_central 190 EErdaskgkdgvYdvpnygklvYaGlqGvvsvlkeiiksndlghplcenLReGdWlldYivnRL 253
                   EE d+++g dgvY++p++gklvYaGlqG++s+lk+ii +n+l+hplc++LR+G+W+ldYi++RL
    KHJ30684.1 930 EELDTTDGTDGVYEIPGFGKLVYAGLQGWWSILKDIIYENNLAHPLCQHLRNGQWALDYIYKRL 993
                   ***************************************************************8 PP

>> hGDE_N  N-terminal domain from the human glycogen debranching enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.4   0.0   6.1e-33   2.2e-29       1      89 [.      41     136 ..      41     137 .. 0.94

  Alignments for each domain:
  == domain 1  score: 101.4 bits;  conditional E-value: 6.1e-33
                 EEEEE-TT-GGGTT-EEEE-S-SSSS---TT--EEEE----SSS-EEEEEEE-S-CEEEEEEEEE-TTSS.........EEE---EEEEE---EES CS
      hGDE_N   1 lrfviegasligrkgslwtNyPeegkeFeRdkfrelklkssfekdiyidipitkaGaFafyftydeeeele.......ekktkgsgYfnVePrLtv 89 
                 +rf+ieg+s+i+r+gslw+N+Pe+g+eF+Rd fre+klk++f+++i+i++pi+++GaFafy++++++++l+       e k ++++Y++V+PrL +
  KHJ30684.1  41 VRFTIEGTSSICRDGSLWVNIPEKGQEFRRDAFREFKLKPDFTRNIQISVPIYESGAFAFYTSFAALPDLSenqpqvyEVKRTETHYIDVAPRLVL 136
                 79*****************************************************************99998988765477777*********976 PP

>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       1.7   6.1e+03     130     152 ..      96     118 ..      89     123 .. 0.86
   2 ?   12.6   0.0     2e-05     0.072      13      89 ..     170     249 ..     164     302 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.7
                    TCEEESSS-TTS-BB-TTTCCCC CS
  Alpha-amylase 130 qeyylhlflkklpdLnteneevr 152
                    + ++ +  ++ lpdL  ++++v 
     KHJ30684.1  96 GAFAFYTSFAALPDLSENQPQVY 118
                    5799999***********99985 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 2e-05
                    CCCCT-SCEEE-B-CE-S-TTTTSS-SCECCE-C.CC--.CCCCCCHHHHHHCT.T-EEEEEE--SC--TTSCCCHCCHH CS
  Alpha-amylase  13 lkeLGvtaiwlsPifkspqadhgYdiadytkidp.efGt.nedlkeLiskahek.gikvilDlVvNHtsdehewfkeslk 89 
                    + e G + i  +P     +++  Y i d  + dp  f +   d++eL++ +  k g+  ++D+V NHt++++ew +e+ +
     KHJ30684.1 170 ISERGYNMIHFTPLQYRGASNCPYSIYDQLSWDPlIFPNeDRDIQELLNSMETKyGLLGLTDVVWNHTANNSEWIQEHPE 249
                    56668888899999888889999999999999984454414589****99986659******************999866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.89u 0.28s 00:00:01.17 Elapsed: 00:00:00.43
# Mc/sec: 10859.56
//
Query:       KHJ30685.1  [L=99]
Description: hypothetical protein EV44_g1720 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.027   14.6   1.1      0.032   14.3   1.1    1.1  1  DUF155          Uncharacterised ACR, YagE family COG1723
          1   10.3  11.1        1.3   10.0  11.1    1.2  1  PRKG1_interact  cGMP-dependent protein kinase interacting dom
        1.4    8.6  10.5        1.5    8.5  10.5    1.0  1  MID_MedPIWI     MID domain of medPIWI
        8.4    5.2   7.1        8.5    5.2   7.1    1.0  1  LMBR1           LMBR1-like membrane protein


Domain annotation for each model (and alignments):
>> DUF155  Uncharacterised ACR, YagE family COG1723
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   1.1   7.1e-06     0.032      78     141 ..      11      71 ..       3      87 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 7.1e-06
      DUF155  78 iShalaqSvkLdvlEesldellestekipkelakkgklklsrkellkktgellslrinlnlkse 141
                 +S  l+qS+k + l + +++++++t+  p++++k+   + +r++ ++kt+ ll+ +++ + +s 
  KHJ30685.1  11 ASKNLSQSCKNSDLSNTVTTTIAKTT--PRKIKKNA-ARNERRKAARKTAGLLKAQQQQQQSST 71 
                 6999******************9875..56776666.444699999***999999998776554 PP

>> PRKG1_interact  cGMP-dependent protein kinase interacting domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0  11.1   0.00029       1.3      12      91 ..      20      97 ..       3      98 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00029
  PRKG1_interact 12 enerLkreLeelekelselkseleklkqqrqesvskrssllelekrerrslerkiseleeelkeleeLraenqrLkdEng 91
                    +n+ L ++++++  +++  k + + ++++r++   k++ ll++++++++s   k    eee+k+ ++L+ +++  k Eng
      KHJ30685.1 20 KNSDLSNTVTTTIAKTTPRKIKKNAARNERRKAARKTAGLLKAQQQQQQSSTSKTD--EEEIKTKHRLKGNQEDQKGENG 97
                    67778888888877777777777777766766677777777777777777666665..99**************9***98 PP

>> MID_MedPIWI  MID domain of medPIWI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5  10.5   0.00034       1.5      73     153 ..       4      85 ..       1      97 [. 0.55

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00034
  MID_MedPIWI  73 snselssklklyaqvckh.klapylssllsnpkssssttsassssssssssssssss..ssaqksqeesestkerekvgiptdg 153
                  +++ + ++ k+++q ck+ +l++ +++ + ++++++ +++a+ ++  + + +++     + +q++q++s s++++e+++ +   
   KHJ30685.1   4 QKAAFRNASKNLSQSCKNsDLSNTVTTTIAKTTPRKIKKNAARNERRKAARKTA--GllKAQQQQQQSSTSKTDEEEIKTKHRL 85 
                  5566778999*******9999999999333333223333333333333333333..2445566666666666666655554443 PP

>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   7.1    0.0019       8.5     228     285 ..      10      83 ..       1      96 [. 0.63

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0019
       LMBR1 228 kevkklrksisesdplrkyleeilkkvPeeiaeklks................nenkteeslaklekqlikalq 285
                 ++ k+l++s ++sd    + ++i k++P +i++++++                +++++++s +k  ++ ik+ +
  KHJ30685.1  10 NASKNLSQSCKNSDLSNTVTTTIAKTTPRKIKKNAARnerrkaarktagllkaQQQQQQSSTSKTDEEEIKTKH 83 
                 455788899999996669999*************9998777655555555554222233333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3114  (0.173685); expected 358.6 (0.02)
Passed bias filter:                      708  (0.0394891); expected 358.6 (0.02)
Passed Vit filter:                       102  (0.00568911); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 782.21
//
Query:       KHJ30686.1  [L=219]
Description: putative glycosyl [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       693  (0.0386525); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1764.35
//
Query:       KHJ30687.1  [L=201]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       883  (0.0492498); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.20s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1600.19
//
Query:       KHJ30688.1  [L=781]
Description: putative protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-10   40.4   0.1       0.24   11.7   0.0    4.8  4  HEAT         HEAT repeat
    2.7e-09   36.8   0.0    5.1e-09   35.9   0.0    1.4  1  Pkinase      Protein kinase domain
    7.9e-07   29.4   0.1    0.00024   21.4   0.0    4.0  4  HEAT_2       HEAT repeats
    6.1e-06   25.7   0.0    1.1e-05   24.9   0.0    1.3  1  Pkinase_Tyr  Protein tyrosine kinase
    8.6e-06   26.1   0.0      0.072   13.6   0.2    3.6  3  HEAT_EZ      HEAT-like repeat
    2.7e-05   24.3   0.8     0.0017   18.5   0.0    2.9  3  Cnd1         non-SMC mitotic condensation complex subunit 1
     0.0015   18.1   0.2       0.15   11.6   0.2    2.5  2  CLASP_N      CLASP N terminal
  ------ inclusion threshold ------
      0.033   12.8   0.1      0.082   11.5   0.1    1.6  1  Adaptin_N    Adaptin N terminal region


Domain annotation for each model (and alignments):
>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00018      0.39       1      30 [.     392     421 ..     392     422 .. 0.93
   2 !   11.7   0.0   0.00011      0.24       1      30 [.     431     460 ..     431     461 .. 0.92
   3 ?    3.5   0.1     0.049   1.1e+02       2      26 ..     471     495 ..     470     500 .. 0.84
   4 !    8.1   0.1    0.0016       3.6       1      23 [.     509     531 ..     509     534 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00018
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 ++P +++  +D +p VRe ++ka+ +++e+
  KHJ30688.1 392 IFPQMITGFTDAAPVVREQSIKAILTIIEK 421
                 789999*******************99986 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00011
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 ll  l k  +D+ p +R ++  +Lg+++++
  KHJ30688.1 431 LLKYLAKTSNDEQPGIRTNTTICLGRIYKN 460
                 68889999*******************997 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.049
                 HHHHHHHHT-SSHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLga 26 
                 + ++ + l+Dp  + R aA+ aL+ 
  KHJ30688.1 471 IAAFTRSLRDPFVHARNAALMALAV 495
                 5678899***************986 PP

  == domain 4  score: 8.1 bits;  conditional E-value: 0.0016
                 HHHHHHHHHT-SSHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAaka 23 
                 +lP+l+ +l D++  VR+ A k+
  KHJ30688.1 509 ILPALCPCLIDKEIIVRAQANKT 531
                 89****************99665 PP

>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.0   2.3e-12   5.1e-09      18     219 ..      38     246 ..      24     286 .. 0.81

  Alignments for each domain:
  == domain 1  score: 35.9 bits;  conditional E-value: 2.3e-12
                 EEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHH CS
     Pkinase  18 aveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeakkiakqilegleylHs 116
                 ++++e+g +  +  ++ +++k++  + +++ +k l++l+hp+i+++++++e+++++y+ +e v    l  +++ ++sls e++k  + +i++ ++++ s
  KHJ30688.1  38 GTKREDGSKCSIFSFDINNNKQSL-SLARNAVKRLRTLRHPKIIKVLDTIENDSYIYVATERVI--PLSWHVK-RKSLSIETIKWGLFSIAQTIKFINS 132
                 555666666666666655555544.5899999******************************99..5677775.689*********************7 PP

                 TT.EE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.....BCTTTSCGGGS-HHHH......TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHH CS
     Pkinase 117 kg.iiHrDlKpeNiLidekgelKitDFGlakelesssk.....ltsfvgtseYlAPEvl......keneyskkvDvWslGvilyelltgkppfsgekgk 203
                 +   iH  +  + i+ +e+ge K++ + +++ ++ ++       +    + +Y +PE+        +++  ++vD +  G+++ e++  + p  +++ +
  KHJ30688.1 133 EAaSIHGAIRLQSIFTSESGEWKVGGLEVVSCVKDDNAiifshGNLLSDSDRYTPPEISssgwdiIKKNPLTAVDAYDFGILISEVFGDHSPGGNQTVQ 231
                 6648*******************************99999886666777899******965554434666899*************9999999866666 PP

                 HHHHHHHHTHHHHHHH CS
     Pkinase 204 ekvekeldqlekilki 219
                   +  + +q e+ +k+
  KHJ30688.1 232 GANIPISMQ-ESYRKL 246
                 544444444.333333 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.39   8.7e+02      16      36 ..      63      83 ..      56      94 .. 0.82
   2 ?    0.9   0.0      0.28   6.3e+02      29      55 ..     389     415 ..     354     428 .. 0.77
   3 !   21.4   0.0   1.1e-07   0.00024       4      86 ..     435     531 ..     429     533 .. 0.72
   4 ?   -3.4   0.0       5.9   1.3e+04      55      73 ..     641     659 ..     641     663 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.39
      HEAT_2 16 vrraairaLgrignpealpaL 36
                ++r+a++ L ++++p++++ L
  KHJ30688.1 63 LARNAVKRLRTLRHPKIIKVL 83
                678999999999999998876 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.28
      HEAT_2  29 npealpaLvellededpavRraaaeaL 55 
                 n++++p ++   +d+ p vR++ ++a+
  KHJ30688.1 389 NDKIFPQMITGFTDAAPVVREQSIKAI 415
                 667888888888999999999999886 PP

  == domain 3  score: 21.4 bits;  conditional E-value: 1.1e-07
      HEAT_2   4 LlqalendpdpevrraairaLgri.gnpea.......lpaLvellededpavRraaaeaLg...ai....g.dpealpaLkellddddddvvReaAaea 86 
                 L +  +nd+ p +r ++ ++Lgri +n ++       ++a+++ l+d+  + R aa +aL+   ++    +  ++ lpaL+ +l d ++ +vR++A ++
  KHJ30688.1 435 LAK-TSNDEQPGIRTNTTICLGRIyKNLSVrtrakvlIAAFTRSLRDPFVHARNAALMALAvtsEVfseeDsANKILPALCPCLID-KEIIVRAQANKT 531
                 222.34699999**********643554333333445***********************85553333322237789*******96.678889998765 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 5.9
      HEAT_2  55 LgaigdpealpaLkelldd 73 
                 Lg+  +++++++L+++++d
  KHJ30688.1 641 LGKTPENSTIESLQKRVKD 659
                 6788888999999998876 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   4.9e-09   1.1e-05      31     203 ..      47     223 ..      27     263 .. 0.76

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 4.9e-09
                  EEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT.EEES CS
  Pkinase_Tyr  31 VavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskk.lvHr 127
                  + + +++ ++++++ +   + +k +++l+hp+i+k+l  + +++ +++ te v    L+ ++++k   +l+++++    + +A+ +++++s+   +H 
   KHJ30688.1  47 CSIFSFDINNNKQSLSLARNAVKRLRTLRHPKIIKVLDTIENDSYIYVATERVI--PLSWHVKRK---SLSIETIKWGLFSIAQTIKFINSEAaSIHG 139
                  5555555566666666667799********************999999999765..799999888...9999999999***********987648*** PP

                  T-SGGGEEEEETTEEEE-STTTHEETTTSSEE..EETTSSTSGGGGS-HHHHHHSE......EEHHHHHHHHHHHHHHHHTTSS CS
  Pkinase_Tyr 128 dlaarNvLlsenkvvkisDfGLardiekddey..vkkeeaklpvkWmapEslkekk......ftsksDvWsfGvllwEiftlge 203
                   ++ + ++ se+   k++   + + +++d+    ++ +    + ++++pE+ +++         ++ D + fG+l+ E+f   +
   KHJ30688.1 140 AIRLQSIFTSESGEWKVGGLEVVSCVKDDNAIifSHGNLLSDSDRYTPPEISSSGWdiikknPLTAVDAYDFGILISEVFGDHS 223
                  ************************997777774333334445789*****98776555555577899************97433 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       2.5   5.5e+03      27      52 ..     394     415 ..     390     415 .. 0.63
   2 !    8.1   0.0    0.0018       3.9      28      55 .]     430     457 ..     429     457 .. 0.96
   3 !   13.6   0.2   3.2e-05     0.072       4      49 ..     486     529 ..     464     532 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 2.5
     HEAT_EZ  27 peilpaLlalLnddsdeV.RaaAagaL 52 
                 p+++  +      d ++V R++++ a+
  KHJ30688.1 394 PQMITGFT-----DAAPVvREQSIKAI 415
                 55566666.....66666699998775 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0018
     HEAT_EZ  28 eilpaLlalLnddsdeVRaaAagaLgnl 55 
                 e+l++L+++ nd+++ +R+++ ++Lg++
  KHJ30688.1 430 ELLKYLAKTSNDEQPGIRTNTTICLGRI 457
                 699***********************97 PP

  == domain 3  score: 13.6 bits;  conditional E-value: 3.2e-05
     HEAT_EZ   4 RraAawaLGr..laggepellqplvpeilpaLlalLnddsdeVRaaAa 49 
                 R+aA++aL+     + e +  +    +ilpaL+++L d++  VRa+A 
  KHJ30688.1 486 RNAALMALAVtsEVFSEEDSAN----KILPALCPCLIDKEIIVRAQAN 529
                 99******77766666666677....999999999999999****996 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   7.4e-07    0.0017      18      89 ..     388     462 ..     368     481 .. 0.83
   2 ?    1.7   0.0      0.11   2.4e+02       3      41 ..     486     528 ..     484     533 .. 0.80
   3 ?   -3.1   0.1       3.2   7.3e+03      95     132 ..     647     684 ..     639     688 .. 0.59

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 7.4e-07
        Cnd1  18 lveylvepLrkrLkDedpyVRktaaivvakLiln..dmvkekgflselaklleDenprVvanalaalteisek.s 89 
                 + +++ +++ ++++D  p VR++ + +++ +i++  d  ++ ++l+ lak  +De+p +++n+ ++l  i ++ s
  KHJ30688.1 388 VNDKIFPQMITGFTDAAPVVREQSIKAILTIIEKlsDKSINGELLKYLAKTSNDEQPGIRTNTTICLGRIYKNlS 462
                 67899999***********************655115666666************************99988743 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.11
        Cnd1   3 Ralairtlg....cirvpnlveylvepLrkrLkDedpyVRkta 41 
                 R+ a+++l+    ++  ++   ++++ L+ +L D++  VR +a
  KHJ30688.1 486 RNAALMALAvtseVFSEEDSANKILPALCPCLIDKEIIVRAQA 528
                 5666666666666777788889999***************998 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 3.2
        Cnd1  95 nllpdiisklsdalnecsewgqitilefLlsyipkdkq 132
                 n+++++++k ++++ne ++++ ++  e+ +++ p +++
  KHJ30688.1 647 NSTIESLQKRVKDINENENDDDRENNEIFFDFSPTKSH 684
                 44555555555566666666666666666666666655 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.014        32     170     205 ..     385     420 ..     365     428 .. 0.68
   2 !   11.6   0.2   6.5e-05      0.15      95     214 ..     431     546 ..     415     558 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.014
     CLASP_N 170 asllldliekslkkgleDanptVRetaRstfweffk 205
                 ++ + d i ++++ g +Da p VRe++ +++ ++ +
  KHJ30688.1 385 QKVVNDKIFPQMITGFTDAAPVVREQSIKAILTIIE 420
                 344446777999999999999999987666665554 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 6.5e-05
     CLASP_N  95 llptLlkllgdtKkiisqnanqalaallsnasfspri.lqvlsv..alqdKnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanp 190
                 ll+ L k   d    i++n++++l  +++n+s+ +r  + +  +   l d  v +R  +++ L++  + f+       ++   + i ++l+ +l D + 
  KHJ30688.1 431 LLKYLAKTSNDEQPGIRTNTTICLGRIYKNLSVRTRAkVLIAAFtrSLRDPFVHARNAALMALAVTSEVFS-------EEDSANKILPALCPCLIDKEI 522
                 788899999999999*****************877765444444114566666777777777777777777.......333347799************ PP

     CLASP_N 191 tVRetaRstfweffkvwPsrAksl 214
                  VR +a +t+  +fk   + A s+
  KHJ30688.1 523 IVRAQANKTIDIYFKKLQKFAASM 546
                 *********988888877766665 PP

>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   3.7e-05     0.082     109     199 ..     386     480 ..     353     532 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.7e-05
                 CCCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCC.HHHHHHHCTT-SSHHHHHHHHHHHHHHHCCCCCCC....HHHHHHHCCHHH CS
   Adaptin_N 109 pelaedlapaikkllkdrspyvrkkAalailklykkdpdllrkq.lveeikellsdkdpgvvlaAvalleeikkndrlll....kllpklvrrLcn 199
                 + + ++++p++ +  +d  p+vr +++ ail++++k +d   +  l++ + +  +d++pg+ ++++  l +i +++ +       l+  ++r L++
  KHJ30688.1 386 KVVNDKIFPQMITGFTDAAPVVREQSIKAILTIIEKLSDKSINGeLLKYLAKTSNDEQPGIRTNTTICLGRI-YKNLSVRtrakVLIAAFTRSLRD 480
                 455577888888888888888888888888888888666555556888888888888888888888888888.33322222444455555555553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (781 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       908  (0.0506442); expected 358.6 (0.02)
Passed bias filter:                      591  (0.0329634); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.41
# Mc/sec: 5682.85
//
Query:       KHJ30689.1  [L=518]
Description: putative duf409 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.6e-51  173.5  22.8    1.3e-50  173.1  22.8    1.2  1  Mannosyl_trans2  Mannosyltransferase (PIG-V)


Domain annotation for each model (and alignments):
>> Mannosyl_trans2  Mannosyltransferase (PIG-V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.1  22.8     7e-55   1.3e-50      26     443 .]     110     518 .]      87     518 .] 0.82

  Alignments for each domain:
  == domain 1  score: 173.1 bits;  conditional E-value: 7e-55
  Mannosyl_trans2  26 lipddtsealnppcllaspslvdslvekllenlvsWDsvyflkiaenGyeyeheyaflpllplfvsllskevlaplvgllslravlvlsvfsls 119
                         +dts  ++ p        +  lv+ l + l  WD+vyf++i++ Gy +e+e+af  +++ f+ l +  v + + +  +l  v+ + ++   
       KHJ30689.1 110 GPGYDTSSSFSYPNE--HKKNIPFLVHYLAQKLTRWDAVYFIEISRRGYIFEQEWAFGWGMTRFMALCTLGVRKYIFDSDGLECVVGVLIAHTT 201
                      445788888888875..444444444444455899*********************************99999999988888777655555544 PP

  Mannosyl_trans2 120 illfllaavilsdvsvlvlkareasfkasllfclspaavflasiYseaLfallafsgvyslesgi...........sissvllfalstivrsng 202
                        l ++   +l   + +  + ++ +f ++ l ++spa +fl++ Y+e+  all+f g+    ++              +s  lf  +t+ rsn+
       KHJ30689.1 202 HFLSVIVLFALTLKIFIGENLENFAFFTACLHIISPAGIFLSAPYAESPCALLSFIGILTFTKSFsvklpltkdflILTSGALFGIATTFRSNA 295
                      444444444444445556677899***********************************99999999******99989999************* PP

  Mannosyl_trans2 203 lvsvgflmfsllqrffeaLielrkarkllkvliallLsvillflplvlfqyYaYkqfClqrsaGdevpWCksdvpllYsyiqshYWgvGlLkYy 296
                      +++ gfl+ +   r   a  +  +a k+ ++l+++ L ++ +++  ++ qy aY+++C +  +  + pWC    p++Y+y+qs YW+vGl +Y+
       KHJ30689.1 296 ILN-GFLILEEAIRTLLAFRKGFRATKFRHLLATG-LAGLFVGSGSLIPQYIAYNEYCAESPT-LKRPWCTKAFPSIYQYVQSFYWNVGLFRYW 386
                      **9.8888888888888888888888877777766.788999*****************9977.688*************************** PP

  Mannosyl_trans2 297 elkqvPnfLlaaPvlilvvysilsyvksrpelflslGlqaseknkklekakdltylsadvfvlvvhaavlvviafl.imhvqvltrflsasPll 389
                      +l ++P fL++aP+  l+  s +   +    l ++  + +            + y    +   + + ++++ i+++  +h q+++r  s+ P+ 
       KHJ30689.1 387 KLSNLPLFLISAPMYCLIFASGIWALN----LTITKNFLKNLDS---TGGLKINYRYCLIVRNLAISQLILSIVTFtTAHAQIISRTSSSYPVW 473
                      **************9998888776666....8888888754444...34445888888888777777777766666279*************** PP

  Mannosyl_trans2 390 yWfaadllqktdlkkkkwkplaedkivklliyWkacaayilLgtlLfanflPft 443
                       Wf+++ll   ++kk+k +pl     vk l  +++  +y +++  Lf++flP++
       KHJ30689.1 474 IWFLTSLLL--SQKKSKFEPL-----VKGLTSYLT--TYGIVQAGLFSSFLPPA 518
                      *********..559*****99.....666776777..8**************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       622  (0.0346924); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3654.24
//
Query:       KHJ30690.1  [L=477]
Description: putative srp40-c-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-23   82.7   1.9    2.4e-23   82.7   1.9    3.4  3  SRP40_C     SRP40, C-terminal domain


Domain annotation for each model (and alignments):
>> SRP40_C  SRP40, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.25   4.5e+03      22      42 ..      50      69 ..      38      71 .. 0.69
   2 ?   -2.2   0.2      0.45   8.1e+03       4      26 ..      91     112 ..      89     136 .. 0.60
   3 !   82.7   1.9   1.4e-27   2.4e-23       1      76 []     408     475 ..     408     475 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.25
     SRP40_C 22 syeakkgaeddyGekanedLi 42
                s++  k ++++yG+  +e+L 
  KHJ30690.1 50 SFA-FKAERKKYGDGTKEKLT 69
                444.33458899999999886 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.45
     SRP40_C   4 Rvdeeevvevadkrladnsyeak 26 
                 +v+ee++++  +++ a ns +++
  KHJ30690.1  91 KVEEENKTTE-TTKDAKNSPKKN 112
                 5644444443.334445555543 PP

  == domain 3  score: 82.7 bits;  conditional E-value: 1.4e-27
     SRP40_C   1 pFrRvdeeevvevadkrladnsyeakkgaeddyGekanedLiktrGkgFrkeKnKkKrgsyrggeIdtesvnSikF 76 
                 pF+R+ +++   ++dk+la+n y        dy++ka+edLi+t+GkgF+keKnKkKrgsyrgg+Id++  n+ikF
  KHJ30690.1 408 PFSRI-PKDI--KVDKKLASNAYVP-----YDYAQKAHEDLIVTKGKGFTKEKNKKKRGSYRGGHIDVNGKNGIKF 475
                 8****.7673..4699*******96.....58*******************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2349  (0.131017); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                       351  (0.0195772); expected 17.9 (0.001)
Passed Fwd filter:                       123  (0.00686039); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 2.65u 0.46s 00:00:03.11 Elapsed: 00:00:00.76
# Mc/sec: 1899.67
//
Query:       KHJ30691.1  [L=278]
Description: putative gpi anchored serine-threonine rich protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      4e-17   62.7   0.0    6.7e-17   62.0   0.0    1.4  1  GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anc
    5.3e-05   23.1   0.0    9.7e-05   22.2   0.0    1.4  1  DUF4448       Protein of unknown function (DUF4448)
     0.0074   14.6   3.2     0.0088   14.3   3.2    1.1  1  Nop14         Nop14-like family
  ------ inclusion threshold ------
       0.61    9.7   5.8        1.3    8.6   5.8    1.6  1  FAM176        FAM176 family
        0.7    9.1   5.0          1    8.5   5.0    1.2  1  Zip           ZIP Zinc transporter
       0.81    8.9   2.7        1.2    8.3   2.7    1.2  1  SLAIN         SLAIN motif-containing family
       0.98    8.3   9.9        1.3    7.9   9.9    1.1  1  DUF2722       Protein of unknown function (DUF2722)
        1.1    9.1   6.4        1.4    8.8   6.4    1.1  1  Sigma70_ner   Sigma-70, non-essential region
        1.2    8.1  25.8        1.8    7.6  25.8    1.2  1  DUF2457       Protein of unknown function (DUF2457)
        1.6    8.4  23.5        2.2    8.0  23.5    1.1  1  Cwf_Cwc_15    Cwf15/Cwc15 cell cycle control protein
        2.9    7.2  10.6        3.8    6.9  10.6    1.1  1  SDA1          SDA1
        3.3    7.0  23.3        4.9    6.4  23.3    1.1  1  NOA36         NOA36 protein
        3.7    7.1  11.0          5    6.6  11.0    1.1  1  PPP4R2        PPP4R2
        9.4    6.2  12.4         15    5.6  12.4    1.2  1  RXT2_N        RXT2-like, N-terminal


Domain annotation for each model (and alignments):
>> GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.0   0.0   5.2e-20   6.7e-17       2      93 .]      29     122 ..      28     122 .. 0.93

  Alignments for each domain:
  == domain 1  score: 62.0 bits;  conditional E-value: 5.2e-20
  GPI-anchored   2 sPssgevvtagkpvtitWkdsg.tdpgtvtlvLcagss.nnlksvktiasgiknsdgsytwtvpaslesggaYflqivsesnegiynySdrFti 93 
                   +P++g+v++agk ++i W++sg   + tv+++L++g + ++++   ++as i++++g +tw+vp+s+ + + Y++ ++ +++e++++yS +F i
    KHJ30691.1  29 TPAAGQVIKAGKDFDILWQPSGvPNDATVSIKLLQGDTpTTMQLGPNVASRIPSKEGRFTWSVPNSITDYKVYGFIMYLDGKEDVFQYSFPFDI 122
                   7********************965569***********7778888*********************************888889********87 PP

>> DUF4448  Protein of unknown function (DUF4448)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   7.6e-08   9.7e-05       9     107 ..       9     102 ..       5     169 .. 0.77

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 7.6e-08
     DUF4448   9 pfirCtpdrynkkgssePFCtPkegselkvgktYyiTWdprfFdekenekVkihlsyvkestkekglkksffssdwlpnsdGfypltvdeewlkgkkse 107
                   ++C  +   + + ++PF tP  g+ +k+gk   i W p+    +++++V i+l   ++ t  +         +++p ++G ++++v +++ + k + 
  KHJ30691.1   9 TALACIAAVKAQTKGFNPFLTPAAGQVIKAGKDFDILWQPSGV--PNDATVSIKLLQGDTPTTMQL--GPN-VASRIPSKEGRFTWSVPNSITDYKVYG 102
                 567898888777799**************************99..9999****9988887777652..333.4557**************999988664 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   3.2   6.9e-06    0.0088     360     408 ..     167     198 ..     142     246 .. 0.57

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6.9e-06
       Nop14 360 dlveseseeeeeeeeedeeeeedeeeeeeeeededdlsdleseeeeeed 408
                 d++++++++++  ++ d+++++d+++++               +++++d
  KHJ30691.1 167 DHDDHDDHDDH--DDHDDKDDDDDDDDD---------------DDDDDD 198
                 11111111111..111111111111111...............111111 PP

>> FAM176  FAM176 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   5.8     0.001       1.3      53      86 ..     166     199 ..     151     227 .. 0.50

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.001
      FAM176  53 rlkkkkkklkeesekasededeeeeeeeedsses 86 
                 +++ ++++++++++++++d+d++++++++d+ ++
  KHJ30691.1 166 HDHDDHDDHDDHDDHDDKDDDDDDDDDDDDDDDD 199
                 3333333333333333222222222222222222 PP

>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   5.0   0.00078         1     107     182 ..     128     203 ..     112     214 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00078
         Zip 107 kektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeqaseeedkeklasl 182
                 +e++p +   +++ +++k+   n ++++s  k+ h+ ++d+d+  ++ +++++ +k+++++   ++++d+ +++ +
  KHJ30691.1 128 NENSPATPPVPKKGPSVKYIPGNAQSPNSPPKNPHDIKHDHDDHDDHDDHDDHDDKDDDDDDDDDDDDDDDDYHHH 203
                 5666667777777788888899999999999999999999999999999999999999999998877777777765 PP

>> SLAIN  SLAIN motif-containing family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   2.7   0.00091       1.2     178     254 ..     182     256 ..     173     265 .. 0.57

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00091
       SLAIN 178 dqeldaysledeeeeydslpqprltrfsplqrglphsstfsSprdsrrsrsPstsqeys.srlsqqsrlqqprrslqg 254
                 d++ d  + +d++++ d+  +++ +  +p+++g+p +++++    s  + +Pst  +    + s+++  q+p+ + ++
  KHJ30691.1 182 DKDDD--DDDDDDDDDDDDDYHHHHAPKPVPSGVPYPDSKHNGTYSHGAPKPSTV-YPPpAKPSTYTPSQKPKPEYTS 256
                 33333..333333333333344446777888999999888888888888777774.2222444444445666655554 PP

>> DUF2722  Protein of unknown function (DUF2722)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   9.9     0.001       1.3     377     431 ..     152     204 ..     139     237 .. 0.56

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.001
     DUF2722 377 lkpaikfensaiasqekeddddddddekerkkeeekdkekdsikadddkdlsmds 431
                   p  + +n++++++ ++d dd dd++++++k++++d  +d+  +ddd+d    +
  KHJ30691.1 152 QSPNSPPKNPHDIKHDHDDHDDHDDHDDHDDKDDDDD--DDDDDDDDDDDYHHHH 204
                 3455566677766666666666666555555555554..4444555555554444 PP

>> Sigma70_ner  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   6.4    0.0011       1.4      34      62 ..     171     197 ..     117     209 .. 0.63

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0011
  Sigma70_ner  34 eeeeeeeeeedeeeeeeeedddeeesese 62 
                  +++ ++ ++ d++++++++ddd  +++++
   KHJ30691.1 171 HDDHDDHDDHDDKDDDDDDDDD--DDDDD 197
                  2222222222222222222222..11111 PP

>> DUF2457  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6  25.8    0.0014       1.8      58      94 ..     167     203 ..     152     213 .. 0.53

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0014
     DUF2457  58 eddeedeeddddddddedddedddeedededddstve 94 
                 ++d++d++dd+dd dd+ddd+ddd++d+d+ddd +++
  KHJ30691.1 167 DHDDHDDHDDHDDHDDKDDDDDDDDDDDDDDDDYHHH 203
                 3344444444444444444444444444444444443 PP

>> Cwf_Cwc_15  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0  23.5    0.0017       2.2     109     145 ..     164     199 ..     139     203 .. 0.59

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0017
                 .------------------------------------ CS
  Cwf_Cwc_15 109 reidaddedseeeeeeeeeesdddsdsdsdddddede 145
                  + d+dd+d++++++++++++ddd+d+d+dddd +d+
  KHJ30691.1 164 IKHDHDDHDDHDDHDDHDDKDDDDDDDDDDDDD-DDD 199
                 355666666655555444444444443333333.333 PP

>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  10.6    0.0029       3.8      90     118 ..     169     197 ..     148     223 .. 0.49

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0029
        SDA1  90 eeeedsddeddeedwevesdddseedseg 118
                 ++ +d+dd dd++d++ ++ddd+++d+++
  KHJ30691.1 169 DDHDDHDDHDDHDDKDDDDDDDDDDDDDD 197
                 11111111111111111111111111111 PP

>> NOA36  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  23.3    0.0038       4.9     267     301 ..     166     200 ..     146     205 .. 0.62

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0038
       NOA36 267 ddeddegdedddddddeedddeeeddedeeeeeee 301
                 +d+dd+ d+dd+dd+d++ddd+++dd+d++++++ 
  KHJ30691.1 166 HDHDDHDDHDDHDDHDDKDDDDDDDDDDDDDDDDY 200
                 45566666666666666666666555555555554 PP

>> PPP4R2  PPP4R2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6  11.0    0.0039         5     246     284 ..     162     197 ..     124     206 .. 0.49

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0039
      PPP4R2 246 vkveekdddeeddeedtdyveeeeddesedddeeeeeee 284
                  +++++ dd++d ++ +d +++++dd++ ddd+++   +
  KHJ30691.1 162 HDIKHDHDDHDDHDDHDDHDDKDDDDDDDDDDDDD---D 197
                 23333223333333332222211111111111111...1 PP

>> RXT2_N  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  12.4     0.012        15      52      81 ..     167     197 ..     145     209 .. 0.40

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.012
      RXT2_N  52 rkk.kekekeekeeeeedeegdeededddde 81 
                  ++ +++++++++++++d+++d++d+dddd+
  KHJ30691.1 167 DHDdHDDHDDHDDHDDKDDDDDDDDDDDDDD 197
                 2222111111222222222222222222211 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        98  (0.005466); expected 17.9 (0.001)
Passed Fwd filter:                        33  (0.00184059); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 2034.29
//
Query:       KHJ30692.1  [L=712]
Description: putative cell cycle inhibitor nif1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.6e-10   39.8   9.3      0.015   16.0   0.3    4.1  4  Sel1           Sel1 repeat
  ------ inclusion threshold ------
      0.024   15.0   0.1       0.13   12.7   0.1    2.3  1  DNA_binding_2  DNA-binding domain


Domain annotation for each model (and alignments):
>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.78     7e+03      25      38 .]     501     514 ..     498     514 .. 0.80
   2 !   16.0   0.3   1.7e-06     0.015       5      35 ..     521     547 ..     516     549 .. 0.89
   3 !   13.0   0.0   1.4e-05      0.13       2      33 ..     580     609 ..     579     613 .. 0.92
   4 !   13.6   1.0   9.3e-06     0.083       1      37 [.     615     649 ..     615     650 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.78
        Sel1  25 kAiewyekAAeqGd 38 
                 k  +++++AA++ +
  KHJ30692.1 501 KSTYHLRLAARMSH 514
                 566899****9976 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 1.7e-06
        Sel1   5 yrLGmfylylnGlgvpkDpekAiewyekAAe 35 
                 y+L+  +   +G g  ++++++i w++kAA+
  KHJ30692.1 521 YALA--C--RHGWGMRPNQREGIAWLRKAAD 547
                 7777..8..99999****************8 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 1.4e-05
        Sel1   2 eAmyrLGmfylylnGlgvpkDpekAiewyekA 33 
                  + y LG    ++nG g+++D+ ++++++e A
  KHJ30692.1 580 LSIYELG--VSHMNGWGIEQDKALGLRCFEIA 609
                 578****..999******************88 PP

  == domain 4  score: 13.6 bits;  conditional E-value: 9.3e-06
        Sel1   1 aeAmyrLGmfylylnGlgvpkDpekAiewyekAAeqG 37 
                 a+Am+  G   +y  G g +kD +k  ++y++A ++G
  KHJ30692.1 615 ADAMAEAG--FCYAQGVGCKKDLKKSARFYRMAEAKG 649
                 68******..999********************7776 PP

>> DNA_binding_2  DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   1.4e-05      0.13      10      46 ..     651     687 ..     650     690 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.4e-05
  DNA_binding_2  10 dmiPnaWFYKLkdmgksRkhskasssssntrkkkqss 46 
                     mi n+W YK k +  +++++ +++s +  r++ +ss
     KHJ30692.1 651 NMIGNSWIYKAKYIDDPKNENLSKESLERGRTSTNSS 687
                    5********************8877777666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (712 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      251  (0.0139997); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 5363.85
//
Query:       KHJ30693.1  [L=281]
Description: hypothetical protein EV44_g4102 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      232  (0.0129399); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 2230.71
//
Query:       KHJ30694.1  [L=192]
Description: putative 60s ribosomal protein l9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-26   92.3   8.9    1.8e-13   51.0   2.6    2.1  2  Ribosomal_L6  Ribosomal protein L6


Domain annotation for each model (and alignments):
>> Ribosomal_L6  Ribosomal protein L6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   2.6   9.9e-18   1.8e-13       1      76 []      12      85 ..      12      85 .. 0.87
   2 !   45.5   0.5   5.1e-16   9.1e-12       1      76 []      97     180 ..      97     180 .. 0.97

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 9.9e-18
                  CSTTEEEEEETTTEEEEEESSEEEEEE-CTTSEEEEEECST.EEEEEECSESCHHHHHHHHHHHHHHHHHHHHHHTC CS
  Ribosomal_L6  1 iPvgvrvsikggqlvlvlGpkgeltreipegvtvevkvegn.kvtvivvsgidkekvAligtvrslinnmikGVteg 76
                  iP+gv+v+ik+ +lv v Gp+g l+ ++++   v +++    +++ +  +g++k  +  ++tvr++inn + GVt+g
    KHJ30694.1 12 IPEGVKVNIKS-RLVIVEGPRGKLSKNLNHL-AVNFSQAKRgVIKIELHHGSRKNVA-TLRTVRTIINNLVIGVTKG 85
                  8*********6.******************9.7777777762666666677777777.*****************98 PP

  == domain 2  score: 45.5 bits;  conditional E-value: 5.1e-16
                   CSTTEEEEEET......TTEEEEEESSEEEEEE-CTTSEEEEEECSTEEEEEECSESCHHHH....HHHHHHHHHHHHHHHHHHTC CS
  Ribosomal_L6   1 iPvgvrvsikg......gqlvlvlGpkgeltreipegvtvevkvegnkvtvivvsgidkekv....AligtvrslinnmikGVteg 76 
                   +P++v+v+ ++      +++++++G+k  +++ +++gv+v+++    ++++  +sg+  e+v    A+i++++++ n++i+++ +g
    KHJ30694.1  97 FPINVNVEKNEetglheVEIRNFIGEKIVRRVVMHPGVEVTIS--KTQKDELQLSGNCLENVsqsaADIQQICRVRNKDIRKFLDG 180
                   8****************************************99..78999*********************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       611  (0.0340789); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1446.72
//
Query:       KHJ30695.1  [L=805]
Description: hypothetical protein EV44_g0872 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   9.8e-222  737.1   0.6   1.1e-221  736.9   0.6    1.0  1  DUF3405   Protein of unknown function (DUF3405)


Domain annotation for each model (and alignments):
>> DUF3405  Protein of unknown function (DUF3405)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  736.9   0.6  6.4e-226  1.1e-221       1     516 [.     232     782 ..     232     783 .. 0.94

  Alignments for each domain:
  == domain 1  score: 736.9 bits;  conditional E-value: 6.4e-226
     DUF3405   1 cfdRfgRygpYGlgeskkegglgvgeegekegsekvwee..ktekvdwrkvdWgelqerCleaNkeRFkeleekeakkekeakeaeekeekekeaekek 97 
                 cf+RfgR+gpYG+g++ + gg+g+ge+g+kegs++ we+  + +++d+r+++W++lq++C++ Nk+RFk+ +++ +      ++ ++ +    ++ +e+
  KHJ30695.1 232 CFERFGRLGPYGYGYMPQFGGTGTGEDGDKEGSKALWENgsEFNQIDYRNINWANLQRECYNVNKARFKQDRPDFSF-----NTIKTFS-VFDNQVDEE 324
                 9*************************************998999**************************3322222.....2222222.222333444 PP

     DUF3405  98 keeeeeeekeekkkkkRtAvvlRtwtgykyteedilnlRalisElsLksGGeYevhllvhvkdeel.piwadeetyqkvleeavpeEfrglatLwsekq 195
                 k++e++++   k+  +R+Avv+R+w++++y+eedilnlRa+isEls+ sGGeY+vhllv+vk+e + piwad+etyq++l+e+vp Efr++ tLws +q
  KHJ30695.1 325 KKSESNTSVIPKNILERSAVVVRVWDDFDYHEEDILNLRAMISELSIGSGGEYDVHLLVQVKNEGAnPIWADSETYQRHLNESVPLEFRDISTLWSVTQ 423
                 44445557889999**************************************************998******************************** PP

     DUF3405 196 meslYpgleeesftr..dlevhgvyrsaflplqlFaqqhpeydyfWnwEmDvRytGhyyelldklsefakkqpRkglweRnerfYipsvhGswedFtqa 292
                 m  lY+g++ ++ftr  dl++hg yr++++++q+Fa+ hpeyd+fW+wE+D+RytGhyy+l++++++++++qpRkglweR+ rfYipsvhGswedF+++
  KHJ30695.1 424 MLMLYQGIF-DTFTRgpDLPIHGPYRGLQMAMQYFAHIHPEYDFFWHWEIDTRYTGHYYHLFSQVEAWSTRQPRKGLWERSGRFYIPSVHGSWEDFKHT 521
                 *********.78999999********************************************************************************* PP

     DUF3405 293 vekqtee...................kgektvwGpvr.....vkevkplgpkpptseeedkyewGvgEeADlitlnpifdpeettWvlrddvtgyknet 367
                 v++qte                    k +k++wGp+r        +++ ++ ppts+e+dky+wGvgE ADlit+np+fdp+ettW+l++d+tgy n++
  KHJ30695.1 522 VRVQTEIgtlgpdniwsniegvkarpKVDKPIWGPKRpkleeDWFITEDDQIPPTSYENDKYQWGVGEPADLITFNPLFDPNETTWLLATDITGY-NTS 619
                 *************************************6665533455559*********************************************.888 PP

     DUF3405 368 eakppRraaiitasrlSrrLLeamheetarkkhtmfsEmvpatvALhhGlKavyaphpvyvdrkwplealekvfnagrkgasggartsvfgkerehnlk 466
                 e+ p Rra+iit sr+S+rLL++mh+eta+kkh++fsEm+++tvALhhGlKavy+php+++dr+wp+e+l+ ++nag++ga+ggartsvfg  rehn+ 
  KHJ30695.1 620 EGLPARRASIITSSRMSKRLLQIMHRETAFKKHHAFSEMWAPTVALHHGLKAVYVPHPIFTDRQWPTEYLAGIMNAGKNGATGGARTSVFGA-REHNFL 717
                 8*******************************************************************************************.****** PP

     DUF3405 467 gltwyynsefaeelyrrwlglkeeneGgeeeee...............eeegrmclpsmllhpvK 516
                 g+twyyn++fa+++++rwlglk++n+Gg e+e                ++egrmclp+mllhpvK
  KHJ30695.1 718 GMTWYYNAGFAPNIWKRWLGLKVNNDGGVEFELsvdesknqsgvgemrGGEGRMCLPPMLLHPVK 782
                 ********************************99******************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (805 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.41
# Mc/sec: 5841.49
//
Query:       KHJ30696.1  [L=369]
Description: putative nuclear mrna splicing factor-associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      9e-11   41.4   0.1    0.00067   19.4   0.0    3.1  2  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
  ------ inclusion threshold ------
       0.04   13.5   0.3      0.061   12.9   0.3    1.3  1  DUF775    Protein of unknown function (DUF775)
      0.041   14.0   0.0      0.083   13.0   0.0    1.6  1  RRM_7     RNA recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   1.1e-07   0.00067       1      64 [.     118     190 ..     118     192 .. 0.87
   2 !   18.0   0.0   3.2e-07    0.0019      12      69 ..     293     347 ..     293     348 .. 0.94

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.1e-07
                 EEEESETTTSSHHHHHHHHHT.TSCE.EE.......EEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFsk.fGpi.ks.......iklvrdetgkskgfafVeFeskedAekAlealngkkl 64 
                 ++V++Lp d+t ee+++lFs  +G i ++       ikl++de+gk kg a + F +  + + A+  l+ +++
  KHJ30696.1 118 VYVTGLPLDATVEEVHTLFSRkCGVIaEEidsgkprIKLYTDENGKFKGDALIVFFKAPSVDMAIMLLDDTEF 190
                 8*******************99***94434444444789999***********************99998887 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 3.2e-07
                 HHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  12 eeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 +e+++e  sk G+++++ l+       +g+  V+F + e+A ++++ ++++++ g+++
  KHJ30696.1 293 KEDIREECSKLGEVTNVILYDM---EEDGVVSVRFSTVEAAIACVRLMDKRNFAGQQV 347
                 589***********99999986...9***************************99876 PP

>> DUF775  Protein of unknown function (DUF775)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.3     1e-05     0.061      76     145 ..     197     266 ..     165     285 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1e-05
      DUF775  76 SAifkvknekssseaesaseassaeesstltiGisiEpleqvaaqlaelkaeqsassssaassskseess 145
                 S  +kv++ +ss ++ +++++s++ e+ + ++Gis+ + +++ +++++l+a+ +  s +++s+ + ++s+
  KHJ30696.1 197 SGKIKVQAAESSYKKVQQQNYSASDEKIKGNVGISMKEKQKIIKKTQKLDARLADWSDEESSNFTDASSK 266
                 666888888888777888888889999999*********************9998887776666555544 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.4e-05     0.083       3      92 ..     117     213 ..     115     216 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.4e-05
       RRM_7   3 kvFvGGlPiDiteeelkatfkefgkvlvdw..Pkkaeskkkaaenskaakgyvflvfedeksvka...Lleacteee...eelylklssrrlkskevq 92 
                  v+v GlP D t ee+++ f++   v+ +    +k++ k ++ en k  kg + +vf +  sv     Ll++++      ++  +k++++ +  k+vq
  KHJ30696.1 117 AVYVTGLPLDATVEEVHTLFSRKCGVIAEEidSGKPRIKLYTDENGK-FKGDALIVFFKAPSVDMaimLLDDTEFRLgdsSSGKIKVQAAESSYKKVQ 213
                 59******************987777666412356899888887666.78*********999985333667766655544555666777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       978  (0.0545485); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 2887.09
//
Query:       KHJ30697.1  [L=208]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1490.93
//
Query:       KHJ30698.1  [L=650]
Description: putative dead deah box helicase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-26   93.5   0.1    2.3e-25   89.6   0.0    2.5  2  ResIII         Type III restriction enzyme, res subunit
    2.8e-15   56.6   0.1    1.6e-13   50.9   0.0    3.1  2  Helicase_C     Helicase conserved C-terminal domain
    1.1e-10   41.5   0.3    1.1e-09   38.3   0.0    2.4  2  DEAD           DEAD/DEAH box helicase
    9.7e-07   28.7   0.1    3.5e-06   26.9   0.1    1.9  1  SWI2_SNF2      SWI2/SNF2 ATPase
    0.00071   18.9   0.0      0.002   17.5   0.0    1.7  1  DUF2075        Uncharacterized conserved protein (DUF2075)
  ------ inclusion threshold ------
      0.021   14.1   0.0      0.048   12.9   0.0    1.6  1  ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase


Domain annotation for each model (and alignments):
>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.6   0.0   7.5e-29   2.3e-25       2     170 ..      35     196 ..      34     197 .. 0.88
   2 ?    0.7   0.1      0.16   4.6e+02      81     118 ..     426     465 ..     399     485 .. 0.66

  Alignments for each domain:
  == domain 1  score: 89.6 bits;  conditional E-value: 7.5e-29
                 -EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--... CS
      ResIII   2 lelreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee.kflflvprkslleqtleefkkflseaykeigkkvsgdkkkakek 99 
                 ++lreyQe++++++l++++ +++kr+ i +aTG+GKT+v ++li+r+++  +++ ++l+l++r +l+eq+ ++ +++++e++     +++  + +a   
  KHJ30698.1  35 FKLREYQEDCVQSVLSNIS-EGQKRLGISLATGAGKTVVFTQLIDRIKSPDGRRdQTLILAHRHELVEQAARHCSQVYPEKTV----EIEMGSMHA--- 125
                 79****************9.***************************99776666*************************963....333333333... PP

                 ....-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.TTTHHHHHT-.......--SEEEEEESS-S CS
      ResIII 100 dstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakkswreilekf.......keavllglTATpe 170
                  +  ++i+v++iqs+++ s        +++++rf+++++DEaH++ a +++ + l++f       ++ +l+g++AT+ 
  KHJ30698.1 126 -TGLADITVASIQSIKSGS-----RISKFDPSRFKLVLVDEAHHIVA-STYLKTLDYFglstcqkNSPILVGVSATFS 196
                 .45778*************.....8899*******************.99999999987776654559********97 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.16
                 ......GEEEESSS-B--.......-SEEEEEHHHHHHTH CS
      ResIII  81 ayke..igkkvsgdkkkakekdstnkkilvttiqsldads 118
                 + ++  i+++ ++  kk+ + +s+n+ki++t + s++  +
  KHJ30698.1 426 EEARqiIEQESDSTDKKSVKMASSNTKITFTDYMSVHDLI 465
                 2222232222222222225788999999999999887655 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.086   2.6e+02      14      31 ..      65      82 ..      56     146 .. 0.76
   2 !   50.9   0.0   5.4e-17   1.6e-13      11     110 ..     274     373 ..     263     374 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.086
                TTTSEEEEEESSHHHHHH CS
  Helicase_C 14 eeggkilifvntidrlek 31
                   gk+++f++ idr+++
  KHJ30698.1 65 TGAGKTVVFTQLIDRIKS 82
                567999*******99964 PP

  == domain 2  score: 50.9 bits;  conditional E-value: 5.4e-17
                 HHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTTSS CS
  Helicase_C  11 kleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqriGRtg 108
                 ++ +e++ +l+f+   +++   ++ + +++gi +  ++g ++++er e l++f++ge+ vLi   v  +G dip+++ V    + r+   ++q+iGR +
  KHJ30698.1 274 ERCSERKSTLVFCVDLQHVIGlTNTF-REHGIDARFITGGTSKSERSERLDRFKNGEFPVLINCGVFTEGTDIPNIDSVLLARPTRSRNLMVQMIGRGM 371
                 55678999******999773346666.4459******************************************************************99 PP

                 ST CS
  Helicase_C 109 Ra 110
                 R 
  KHJ30698.1 372 RL 373
                 95 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.0   3.7e-13   1.1e-09       3     170 ..      40     196 ..      38     202 .. 0.78
   2 ?    0.2   0.0      0.19   5.6e+02      64     114 ..     413     467 ..     374     477 .. 0.67

  Alignments for each domain:
  == domain 1  score: 38.3 bits;  conditional E-value: 3.7e-13
                 HHHHHHHHHH.....TTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHT CS
                 xxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   3 iQaeaiplil.....gggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldn 96 
                 +Q+ +++ +l     g++ + ++ +TG+GKT +f   +++++ +  + ++ ++li++  +eL+eq +++++++  +   +v+  +g+  a    + l  
  KHJ30698.1  40 YQEDCVQSVLsniseGQKRLGISLATGAGKTVVFT-QLIDRIKS-PDGRRDQTLILAHRHELVEQAARHCSQVYPEK--TVEIEMGSMHA----TGL-- 128
                 566666666655554457888************86.56677755.677778**********************9962..34434554333....334.. PP

                 TCSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  97 gvdivvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp 170
                  +di+v+  + + +  +  k++ s+++++ +DEa+ +  + + ++++    +    tc+++ +  ++ +SAT++
  KHJ30698.1 129 -ADITVASIQSIKSGSRISKFDPSRFKLVLVDEAHHIVASTYLKTLDYFGLS----TCQKN-SPILVGVSATFS 196
                 .9***********988889999******************999999994444....57766.335999****98 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.19
                 HHHHHHHTTTSTSEEE.EEETTSSHHHHHHHHH...TTCSEEEEEHHHHHHHHHC CS
                 xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxx RF
        DEAD  64 lnnlkkfkkyidlrvl.liiggvaardqlskld...ngvdivvgtpgrlddllst 114
                  ++l+k+k++i+ ++   ii++++ + +++ ++   ++++i+++    ++dl+s+
  KHJ30698.1 413 PKDLRKLKEKIEKEEArQIIEQESDSTDKKSVKmasSNTKITFTDYMSVHDLISD 467
                 5678889999887776688887777666666643335599999999999998854 PP

>> SWI2_SNF2  SWI2/SNF2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.1   1.2e-09   3.5e-06       2     138 ..      41     170 ..      40     177 .. 0.86

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 1.2e-09
   SWI2_SNF2   2 QyravekavervkegdrkgGviWHtqGSGKsltmvflakklleeelknpkvvvvtDRkdLdkQlsktfakageekpkqaesrkeLkellekesekiift 100
                 Q  +v++++++++eg+++ G+    +G+GK++  + l  ++++++ ++ + +++  R++L +Q +++ +++  ek++++e ++   + l    ++i ++
  KHJ30698.1  41 QEDCVQSVLSNISEGQKRLGIS-LATGAGKTVVFTQLIDRIKSPDGRRDQTLILAHRHELVEQAARHCSQVYPEKTVEIEMGSMHATGL----ADITVA 134
                 7778999999****99999975.578*****************999999999*****************99988888888887777777....78**** PP

   SWI2_SNF2 101 tiqKfeeeekeklevlsereniivlvDEaHRsqygela 138
                  iq +++   +++++++ ++  +vlvDEaH    +++ 
  KHJ30698.1 135 SIQSIKSG--SRISKFDPSRFKLVLVDEAHHIVASTYL 170
                 *****765..45999999*99*********87666655 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   6.6e-07     0.002      10     102 ..      65     166 ..      61     186 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 6.6e-07
     DUF2075  10 aGtGKtvvllnllaeleddeeertavylsvNhp..lvlvlrealakke.........ekkkkkeafeklssfinnlsefkkaeekkeepkedvvivDEA 97 
                 +G+GKtvv  +l+ ++ ++ ++r+ + l+  h+  lv+   ++ ++            +++ +  +    + i++++   ++++k +  ++++v+vDEA
  KHJ30698.1  65 TGAGKTVVFTQLIDRI-KSPDGRRDQTLILAHRheLVEQAARHCSQVYpektveiemGSMHATGLADITVASIQSIK-SGSRISKFDPSRFKLVLVDEA 161
                 7***************.666666666555555500555444444444465554433222222222222233344444.37888999999********** PP

     DUF2075  98 hrllt 102
                 h +  
  KHJ30698.1 162 HHIVA 166
                 *9876 PP

>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.6e-05     0.048      44     151 ..     265     373 ..     251     389 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.6e-05
  ERCC3_RAD25_C  44 nkfracefLikyhekrgDkiivfs...DnvfaLkeya..kklkkpyiyGetseaerlkilqkfkknpkvntiflskvgDtsiDlPeanvliqissh 134
                    nk+++  +L ++ e+++   +vf+    +v  L++    + +  ++i+G ts++er++ l++fk+  ++ +++   v  +  D+P+   ++ ++  
     KHJ30698.1 265 NKITVRSWLERCSERKS--TLVFCvdlQHVIGLTNTFreHGIDARFITGGTSKSERSERLDRFKNG-EFPVLINCGVFTEGTDIPNIDSVL-LARP 356
                    55566666666666554..45565211344555544311346789******************976.788888899999999***998876.5667 PP

  ERCC3_RAD25_C 135 fgsrrqeaqrlGriLra 151
                    + sr    q +Gr +r 
     KHJ30698.1 357 TRSRNLMVQMIGRGMRL 373
                    78999999999998885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (650 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1351  (0.0753528); expected 358.6 (0.02)
Passed bias filter:                      676  (0.0377043); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 4439.27
//
Query:       KHJ30699.1  [L=640]
Description: putative dna-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (640 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1142  (0.0636957); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4517.19
//
Query:       KHJ30700.1  [L=676]
Description: putative rsc complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-32  110.8   4.4    5.3e-32  109.6   4.4    1.6  1  SWIRM-assoc_1    SWIRM-associated region 1
    1.6e-30  105.3   0.2    4.6e-30  103.8   0.2    1.9  1  SWIRM            SWIRM domain
    2.9e-10   40.2   0.2    6.4e-10   39.1   0.2    1.5  1  Myb_DNA-binding  Myb-like DNA-binding domain
      5e-06   26.7   0.2    1.2e-05   25.4   0.2    1.7  1  Myb_DNA-bind_6   Myb-like DNA-binding domain
  ------ inclusion threshold ------
      0.044   13.7   0.9       0.22   11.4   0.0    2.4  2  Myb_DNA-bind_7   Myb DNA-binding like
       0.22   11.4   0.5        2.1    8.3   0.0    2.6  3  Phage-MuB_C      Mu B transposition protein, C terminal
       0.93    9.4  10.9       0.82    9.5   7.2    2.5  2  ZZ               Zinc finger, ZZ type


Domain annotation for each model (and alignments):
>> SWIRM-assoc_1  SWIRM-associated region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.6   4.4   2.1e-35   5.3e-32       2      83 ..     544     625 ..     543     626 .. 0.98

  Alignments for each domain:
  == domain 1  score: 109.6 bits;  conditional E-value: 2.1e-35
  SWIRM-assoc_1   2 iALaaaAakAkvlasqeereiqrlvaqlvetqlkKlelKLkqfeelEklleaerrelekqrqqLlleRlalkkevlkvaekl 83 
                    ++Laa+A +A  las+eere++rlv+++v+++l+Kl+lKLkqf+elE++l+aerrele+ rqqL+l+R+++k++v++v+ekl
     KHJ30700.1 544 VPLAAIAGRAGGLASHEEREMTRLVSAAVNITLQKLDLKLKQFNELEQILQAERRELERGRQQLFLDRIQFKNRVRDVQEKL 625
                    79******************************************************************************97 PP

>> SWIRM  SWIRM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.8   0.2   1.8e-33   4.6e-30       1      89 []     118     203 ..     118     203 .. 0.97

  Alignments for each domain:
  == domain 1  score: 103.8 bits;  conditional E-value: 1.8e-33
       SWIRM   1 ps.sewFdpdslhpiEkellselfngk..dktpeeYlkiRnkiialyrenpkeyltvteaqkalkrrrltgidvnllsrihefLerwGlINf 89 
                 ps s wFd+++++ iE+++l+e+fn++  +ktp++Y+++R+++i++yr np eyltvt++     rr+l+g dv++++r+h+fLe+wGlIN+
  KHJ30700.1 118 PSySIWFDMNQINNIERKALPEFFNSRnrSKTPAVYKDYRDFMINTYRINPVEYLTVTAC-----RRNLAG-DVCAIMRVHAFLEQWGLINY 203
                 67788*******************999889******************************.....******.*******************8 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1   0.2   2.5e-13   6.4e-10       3      45 ..     391     433 ..     390     434 .. 0.97

  Alignments for each domain:
  == domain 1  score: 39.1 bits;  conditional E-value: 2.5e-13
                      SSBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 kWteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwrny 45 
                      +W+  E ++Llea++++ ++W++++e++g+Rt+++c  +++++
       KHJ30700.1 391 PWSDSELLRLLEALERYDEDWTEVSEYVGTRTKEECVIKFLQL 433
                      7**************************************9986 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.2   4.8e-09   1.2e-05       1      43 [.     392     433 ..     392     453 .. 0.87

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 4.8e-09
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwknkL 43 
                     W++ E  +Ll+  e+y  dW++++e  + Rt+++c  ++++ L
      KHJ30700.1 392 WSDSELLRLLEALERYDEDWTEVSEYVGTRTKEECVIKFLQ-L 433
                     9**************************99***********9.6 PP

>> Myb_DNA-bind_7  Myb DNA-binding like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   8.7e-05      0.22       6      51 ..     387     432 ..     381     450 .. 0.88
   2 ?   -0.6   0.4      0.48   1.2e+03      51      83 ..     559     594 ..     558     599 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 8.7e-05
  Myb_DNA-bind_7   6 kktkkWskeetekFYkaLsqfGtDFsliaklfpkrtrrqlKlKFkk 51 
                     ++  +Ws++e  +  +aL+ +  D++ ++++   rt+++   KF +
      KHJ30700.1 387 NRDAPWSDSELLRLLEALERYDEDWTEVSEYVGTRTKEECVIKFLQ 432
                     47889***********************************999965 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.48
  Myb_DNA-bind_7  51 kEerknpeliekalkkrke...ldleefkeeaekek 83 
                     +Eer+  +l+++a++   +   l+l++f+e  + ++
      KHJ30700.1 559 HEEREMTRLVSAAVNITLQkldLKLKQFNELEQILQ 594
                     699*******99976544441155556666655555 PP

>> Phage-MuB_C  Mu B transposition protein, C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.9   4.8e+03      10      21 ..     247     258 ..     245     265 .. 0.81
   2 ?   -0.5   0.0      0.46   1.2e+03      35      47 ..     546     558 ..     539     571 .. 0.85
   3 ?    8.3   0.0   0.00081       2.1      45      73 ..     618     646 ..     612     650 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.9
                  SS-SGGGTTHHH CS
  Phage-MuB_C  10 kktkkeDvkaia 21 
                  +k ++ Dvka++
   KHJ30700.1 247 RKNTDTDVKAVV 258
                  678999****97 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.46
                  HHTTSSS-S-HHH CS
  Phage-MuB_C  35 lqeiaekpGaLRa 47 
                  l +ia ++G+L++
   KHJ30700.1 546 LAAIAGRAGGLAS 558
                  679*******975 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.00081
                  HHHHHHHHGGGT-TT-TTS--SSHHHHHH CS
  Phage-MuB_C  45 LRaltktLrlAamfAkgegeeltadlira 73 
                   R++++ LrlAa++ +g+ +++t+dl+ +
   KHJ30700.1 618 VRDVQEKLRLAAVMGHGDINKMTQDLMET 646
                  599********************998765 PP

>> ZZ  Zinc finger, ZZ type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       3.9   9.9e+03       2       9 ..     221     228 ..     221     228 .. 0.86
   2 ?    9.5   7.2   0.00032      0.82       5      44 ..     322     370 ..     320     371 .. 0.71

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 3.9
                 SS-EE-TT CS
          ZZ   2 hkkytCdg 9  
                 h+k++Cd+
  KHJ30700.1 221 HFKVICDT 228
                 8899**96 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00032
                 EE-TTT-S..EESSEEEESSSS.........S-EE-HHHHHH..H---SS CS
          ZZ   5 ytCdgCseapligvRyhclrcs.........dYDLCqsCfst.hkagkhk 44 
                   C+ C+ ++  +  yh+   +          YDLC +Cfs+ +  ++h+
  KHJ30700.1 322 INCHSCGIDC-TRIYYHNSHTEstptlpgktKYDLCPNCFSEsRMPANHQ 370
                 5688888854.477888877652233333336****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1100  (0.0613531); expected 358.6 (0.02)
Passed bias filter:                      619  (0.0345251); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.64u 0.30s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 4609.91
//
Query:       KHJ30701.1  [L=189]
Description: putative perilipin mpl1-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.036   13.6   0.0      0.046   13.2   0.0    1.2  1  PET10     Petite colonies protein 10


Domain annotation for each model (and alignments):
>> PET10  Petite colonies protein 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.6e-06     0.046       1      48 [.      21      68 ..      21     100 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.6e-06
       PET10  1 nsptlshLqrYpvvskllkkvlslplvskvlsvvlsvaaklkealvds 48
                ns+ lshL+ Yp+vs+ +++++s p   k ls++ s+ +k+++ l+  
  KHJ30701.1 21 NSAFLSHLKSYPIVSDGITTFTSNPYGAKSLSLTTSSYEKISKPLLPY 68
                6999******************************99999998877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       274  (0.0152825); expected 358.6 (0.02)
Passed bias filter:                      257  (0.0143343); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1364.15
//
Query:       KHJ30702.1  [L=285]
Description: putative p protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.7e-33  113.2   0.0    1.3e-32  112.2   0.0    1.5  2  Acyltransferase  Acyltransferase
  ------ inclusion threshold ------
      0.029   14.3   0.2      0.055   13.5   0.2    1.3  1  Dzip-like_N      Iguana/Dzip1-like DAZ-interacting protein N-


Domain annotation for each model (and alignments):
>> Acyltransferase  Acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       1.1     1e+04      55      65 ..      29      39 ..      24      42 .. 0.75
   2 !  112.2   0.0   1.5e-36   1.3e-32       8     134 ..      95     217 ..      89     218 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 1.1
  Acyltransferase 55 ipllgflmrll 65
                     ip++gf++rll
       KHJ30702.1 29 IPIAGFFARLL 39
                     49999999976 PP

  == domain 2  score: 112.2 bits;  conditional E-value: 1.5e-36
  Acyltransferase   8 enlpekgpailvaNHqsylDvlllwlllyksngprnvviiakkellsipllgflmrllgfifidRksnaraagslenise.lleegklvviFPE 100
                      ++l++ +pai++ NHq++lDvl+l +++     p+ + + akk+l+++p+lg++m l+g +fidR++  +a+++++ +++ +++e + v++FPE
       KHJ30702.1  95 DYLNKTRPAIFIGNHQTELDVLMLGCIF-----PKWCSVTAKKSLKRVPFLGWFMALSGSVFIDRGNSINARQAMSGATDeITRERQSVYMFPE 183
                      788999**********************.....999*****************************************99989999999****** PP

  Acyltransferase 101 Gtrsregel..lpfkkGlvrlaakakkgvpivPvai 134
                      Gtrs +++   lpfkkG+++la++a  gvpivPv++
       KHJ30702.1 184 GTRSYARGPklLPFKKGAFHLAVQA--GVPIVPVVV 217
                      ****9976666**************..*******86 PP

>> Dzip-like_N  Iguana/Dzip1-like DAZ-interacting protein N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.2   6.1e-06     0.055       8      38 ..     242     272 ..     239     281 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 6.1e-06
  Dzip-like_N   8 ekldwrklasvDvdrvakeldvdtLqenien 38 
                  +++d++ l+s Dvd +++e++ ++L+e+i+ 
   KHJ30702.1 242 QPIDTKNLTSADVDDLTRETQAKMLEELIQL 272
                  79**************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1982.04
//
Query:       KHJ30703.1  [L=317]
Description: putative pyridoxine [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      5e-53  179.7   0.0    5.5e-43  147.0   0.0    2.3  2  SNO        SNO glutamine amidotransferase family
    4.6e-09   36.1   0.0    7.2e-08   32.3   0.0    2.1  2  GATase_3   CobB/CobQ-like glutamine amidotransferase domain
    0.00052   19.8   0.0     0.0022   17.8   0.0    1.8  1  GATase     Glutamine amidotransferase class-I
     0.0039   17.0   0.0     0.0068   16.2   0.0    1.3  1  DJ-1_PfpI  DJ-1/PfpI family


Domain annotation for each model (and alignments):
>> SNO  SNO glutamine amidotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.0   0.0   1.2e-46   5.5e-43       1     142 [.      63     229 ..      63     249 .. 0.91
   2 !   30.6   0.0   5.9e-11   2.7e-07     142     187 ..     255     305 ..     244     306 .. 0.79

  Alignments for each domain:
  == domain 1  score: 147.0 bits;  conditional E-value: 1.2e-46
                 EESSSSSHHHHHHHHHHTTSEE........EEE-SGGGGCC-SEEEE-SS-HHHHHHHHHHTT-HHHHHHHHHTT.--EEEETHHHHHHCCEETTB... CS
         SNO   1 vlalqGaveehveaikkclaen........ktvkrkedlaevdaliiPGGestamskliertglyedllefvknsekvvlGtCaGlillskelene... 88 
                 +lalqGa++eh+  ++++  +         k v+++ +l+ +daliiPGGesta+s+++++t+l+e+l++fvk  +k+++GtCaGlill++ ++++   
  KHJ30703.1  63 ILALQGAFREHTMILRQSACKLvtrrkwifKEVRTVSELDSCDALIIPGGESTAISLIAQQTNLLEPLRNFVKVLKKPTWGTCAGLILLAEATNGSkeg 161
                 69***********9998777667799******************************************************************9998555 PP

                 SS-SS--CCEEEETTTT-SCCGEEEEEEEETTTC..............SEEEEEESS--EEEEE-.TT CS
         SNO  89 lvktlellkvkvkrnafGrqvdsfekeldfknli..............ekftavfiraPvieeildde 142
                   + ++ l+v+v+rn fGrqv+sfe+eld++ l+               +f+a+firaP++e+il+ +
  KHJ30703.1 162 GQELIGGLDVQVNRNHFGRQVESFEAELDLSFLGeinahesssplepePPFKAIFIRAPIVEHILHSK 229
                 45567889***********************9988899999999988778**************9765 PP

  == domain 2  score: 30.6 bits;  conditional E-value: 5.9e-11
                 TTCEEEEECT......TEEEEEEETTEEEESS-GGGSTTHCHHHHHHHHHHC CS
         SNO 142 eavkvlyeld......geivvakqkkilatsfhPelaeddirvhdyfveevv 187
                 e v++l   +      g iv+++q +i++tsfhPel+ d ir+h +++e+v 
  KHJ30703.1 255 EPVEILARVPaadaetGAIVAVRQANIFGTSFHPELTGD-IRIHVWWLEQVL 305
                 55555555444445569********************99.********9985 PP

>> GATase_3  CobB/CobQ-like glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0   1.6e-11   7.2e-08      24     143 ..      89     201 ..      78     207 .. 0.79
   2 ?    1.6   0.0      0.04   1.8e+02     169     188 ..     268     287 ..     246     293 .. 0.75

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 1.6e-11
    GATase_3  24 evrvrfvplkdeslgedadlvilpGgkdtiqdlallresgldeaikeaae.aggpvlgiCGGlqmLGeeiedpegvegeageveglglLdietefek.e 120
                 ++ ++ v+ + ++l++ +d++i+pGg++t+ +l +++  +l e ++++++  ++p +g C+Gl++L e    ++     +g  e +g Ld++++ ++  
  KHJ30703.1  89 KWIFKEVR-TVSELDS-CDALIIPGGESTAISLIAQQT-NLLEPLRNFVKvLKKPTWGTCAGLILLAEATNGSK-----EGGQELIGGLDVQVNRNHfG 179
                 55666777.7788966.**************9998887.9999*****996799**************976654.....35789999999999988877 PP

    GATase_3 121 kltgqvegevelaaegeevkGyE 143
                 +++++ e+e++l+    e++++E
  KHJ30703.1 180 RQVESFEAELDLS-FLGEINAHE 201
                 7777777775552.224555555 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.04
    GATase_3 169 ekdGavkksedgnvlGtYlH 188
                  + Ga+   ++ n++Gt +H
  KHJ30703.1 268 AETGAIVAVRQANIFGTSFH 287
                 678999998999******** PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0     5e-07    0.0022      31     175 ..      93     292 ..      72     300 .. 0.62

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 5e-07
                 SHHHHHHHTHHSTSEEEEEEESSCTT..TTTHHHHHHHHCT....STS-EEEETHHHHHHHHHTTT................................. CS
      GATase  31 asaeeilellknpdgilvsgGpgspg..vegkieaikeare....nkiPiLGICLGmQllaiefgr................................. 90 
                 ++   + ++l+++d+++++gG  +    + ++ ++++ +r+     k+P  G C G+ lla++  +                                 
  KHJ30703.1  93 KEVR-TVSELDSCDALIIPGGESTAIslIAQQTNLLEPLRNfvkvLKKPTWGTCAGLILLAEATNGskeggqeliggldvqvnrnhfgrqvesfeaeld 190
                 3222.2236899*********9888899666666655555555589******************99999999999999888888888776666666665 PP

                 .......................EEE..EEECEEEEEEEEEEEETTTCGGTTTTSEEEEEEEEEEEEESGCHHHTTEEEEEEEETTEEEEEEEEETTT. CS
      GATase  91 .......................kvv..kekekehhggtmrlgddetallyglknevierhrHryevnpkelepaglevtakseddeelmeiiekknp. 163
                                          +  ++    +h   ++ ++++t+ l+++    +++++     n+   ep ++      + d e  +i+  ++  
  KHJ30703.1 191 lsflgeinahesssplepeppfkA-IfiRAP-IVEHILHSKSDAHPTKALTDN---STVTQSCDTINNR---EPVEILARVPAA-DAETGAIVAVRQAn 280
                 555554444444443333333321.033444.444444444444444433333...4444444444443...555533333332.33677888888855 PP

                 EEEESSBTTSTT CS
      GATase 164 fvgvQFHPEsts 175
                 ++g+ FHPE t 
  KHJ30703.1 281 IFGTSFHPELTG 292
                 *********986 PP

>> DJ-1_PfpI  DJ-1/PfpI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.5e-06    0.0068      59     110 ..     101     154 ..      88     160 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.5e-06
                 CCG-SEEEE--BHHHHHHH.HTSHHHHHHHHHHH.HTT-EEEEETTTHHHHHHT CS
   DJ-1_PfpI  59 aaeyDalvlpGGragperl.renekvvelvkefa.ekgklvaaICagpqlLaaa 110
                  ++ Dal++pGG++ + +l ++++ ++e +++f+   +k+    Cag +lLa+a
  KHJ30703.1 101 LDSCDALIIPGGESTAISLiAQQTNLLEPLRNFVkVLKKPTWGTCAGLILLAEA 154
                 5689**********98766267789*********5589**********999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2203.56
//
Query:       KHJ30704.1  [L=567]
Description: putative sodium calcium transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-42  144.6  37.7    4.1e-24   85.3  16.0    2.2  2  Na_Ca_ex  Sodium/calcium exchanger protein


Domain annotation for each model (and alignments):
>> Na_Ca_ex  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4  13.7     3e-22   5.4e-18       2     150 ..     180     337 ..     179     338 .. 0.86
   2 !   85.3  16.0   2.3e-28   4.1e-24       2     149 ..     416     559 ..     415     561 .. 0.92

  Alignments for each domain:
  == domain 1  score: 65.4 bits;  conditional E-value: 3e-22
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCECC CS
    Na_Ca_ex   2 lfvlfilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigslkvdseslk 100
                  +++fi+ +++i++la +l+ ++eeia  l++ +  lG +l+A ++++ E+i+++ia+ ++e+ ++  +++Gs++ nlllv+G+++l+g+  ++se++ 
  KHJ30704.1 180 GTIIFIVNFIAIVPLAGLLSFATEEIA--LHVGE-SLGGLLNASFGNAVEIIVAVIALSKDEILVVQTSLIGSILSNLLLVMGMCFLFGG-LRRSEQYF 274
                 5799***********************..67766.67777**************************************************.77777754 PP

                 HHHHHHHHHHHHHHHHHHHTCHHHHH..............HTEEHHHHHHHHHHHHHHHHHHHH CS
    Na_Ca_ex 101 ldlgllllvallllllvlllllplfv..............pgrltvleglvllllYalylvlsl 150
                 ++  +   ++ll+l++ ++ ++p+ +                 l++ ++++ll++Ya+yl+++l
  KHJ30704.1 275 NETVAQTAASLLALSIGSI-IIPTCFqlfttngddkimrnIASLSRGTSVILLVVYAAYLYFQL 337
                 4444666666666665555.56666678889********999********************96 PP

  == domain 2  score: 85.3 bits;  conditional E-value: 2.3e-28
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCECC CS
    Na_Ca_ex   2 lfvlfilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigslkvdseslk 100
                 ++++++ +++++ ++a+f+v+ +++i+ks +is +++Gl+ll++++++ E+++++++a+++++dlaig ++Gs +++ llvi+l ++ig+    +e+++
  KHJ30704.1 416 AWATLAGATAIVGLCAEFMVDGISSITKSGHISVEFVGLILLPIVGNAAEHATAVTVAIKDKMDLAIGVAVGSSMQISLLVIPLLVVIGW-IMGKENMT 513
                 6889999*********************************************************************************99.99999*** PP

                 HHHHHHHHHHHHHHHHHHHTCHHHHHHTEEHHHHHHHHHHHHHHHHHHH CS
    Na_Ca_ex 101 ldlgllllvallllllvlllllplfvpgrltvleglvllllYalylvls 149
                 l++ ++++++l++++l++  +l+   +g+  +leg++l+ lY+++++ +
  KHJ30704.1 514 LSFDGFQVAVLFVSVLLVN-YLIG--DGKSHWLEGMLLMCLYIIIAICA 559
                 ***9988877777665555.6555..5****************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (567 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       834  (0.0465168); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 3892.78
//
Query:       KHJ30705.1  [L=532]
Description: putative mboat family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-50  171.2   8.0    9.2e-50  169.9   8.0    1.6  1  MBOAT     MBOAT, membrane-bound O-acyltransferase family
  ------ inclusion threshold ------
      0.085   12.7   0.0       0.14   12.0   0.0    1.3  1  CBP4      CBP4
        1.1    9.0   6.6      0.097   12.3   1.2    2.1  2  DUF3961   Domain of unknown function (DUF3961)


Domain annotation for each model (and alignments):
>> MBOAT  MBOAT, membrane-bound O-acyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.9   8.0   1.5e-53   9.2e-50      15     345 ..     123     436 ..     118     439 .. 0.91

  Alignments for each domain:
  == domain 1  score: 169.9 bits;  conditional E-value: 1.5e-53
       MBOAT  15 lltlalsvltlqlialvlslydgleketeltedvkellklllisyfvvgflelklhslslvfrklasaallsklpslleylgYvffyplllvGPilsys 113
                 ++t a ++lt +l+++++++ dg   +++lt  +ke +                                l  lps l+++g+++f+p+l++GP +++ 
  KHJ30705.1 123 DITGAQMILTIKLTSFAWNVADGQLPKNSLTGPQKEKA--------------------------------LECLPSVLDFAGFIMFFPSLFAGPAFDFV 189
                 68999*********************************................................8899************************* PP

       MBOAT 114 eymsfvesplsrllyta.................krnfavalyalflgltylilieyvlskicakdftifkmlssaqllmrsvimrilllllllfllif 195
                 +y++++e++++++   +                 + nfa+a +  + g ++ il+  ++  ++ k++t + +++++++ +  ++++  ++++l++++  
  KHJ30705.1 190 DYKRWIEMEMFDIPI-QgtdgnsskldsrkikrvPQNFAPAMLKAASGVMWIILFMKLSTIYYPKFLTEDIYMTYRFPRRVWILHLLCFTTRLKYYGV- 286
                 *************54.4699**************99*****999999888777777777777777788888887766655555555555566666665. PP

       MBOAT 196 dflglwlvalgedilsGlgvng.......arldrvadrniygdwenavsfsefwraWNipvhkWLlryvYkplgskkfklnkslatlatFlfsAvwHgl 287
                      w ++++++ilsG+g++g       a ++ ++ ++ +g +e+a++++ ++ +WNi++++WL++y+Y +++  ++k+++++a+latF  sA+wHg+
  KHJ30705.1 287 -----WALTEAACILSGFGYAGinpatgkASWNNLRHVDPIG-VETAQNTRAYLGSWNINTNNWLRNYIYLRVT-PRGKKPGFRASLATFISSALWHGF 378
                 .....589**********************************.******************************7.78********************** PP

       MBOAT 288 algyliwfvlrvllllveklimrlvalsnlkfdrrrailsnvifwlgaflgpslalll 345
                 ++gy+++f+l+ ++++v k ++r  ++++   ++ ++  ++ +++++ ++ ++l +++
  KHJ30705.1 379 YPGYYLSFILASFVQTVAKNFRRYLRPFFVDPSTSKPTSLKSLYDIFSYIVTQLSFSF 436
                 ************************************************9999998876 PP

>> CBP4  CBP4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.4e-05      0.14       3      47 ..     449     491 ..     447     500 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.4e-05
        CBP4   3 lwvrwlkvllaGgaiigtGvllfkyttPtdeeLikrlsPelrkky 47 
                 +++ w +v+++G  iigt+v    +++P+ + Lik+l    rk+ 
  KHJ30705.1 449 SFLVWSRVYFYG--IIGTAVSTIFFASPAKQMLIKKLDEMKRKEK 491
                 6889******98..8*********************985555554 PP

>> DUF3961  Domain of unknown function (DUF3961)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.4       1.7     1e+04      28      32 ..     240     244 ..     238     246 .. 0.86
   2 ?   12.3   1.2   1.6e-05     0.097      15      31 ..     455     471 ..     453     474 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 1.7
     DUF3961  28 iVLFm 32 
                 i+LFm
  KHJ30705.1 240 IILFM 244
                 99**9 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 1.6e-05
     DUF3961  15 rvWFYGFYGiAvSiVLF 31 
                 rv+FYG  G+AvS + F
  KHJ30705.1 455 RVYFYGIIGTAVSTIFF 471
                 8************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3712.66
//
Query:       KHJ30706.1  [L=178]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
          3    7.7   9.5        6.1    6.8   0.2    3.2  3  HscB_4_cys      Co-chaperone HscB tetracysteine metal binding


Domain annotation for each model (and alignments):
>> HscB_4_cys  Co-chaperone HscB tetracysteine metal binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.6     0.054   9.6e+02      19      23 ..      53      57 ..      48      58 .. 0.87
   2 ?    6.8   0.2   0.00034       6.1       1      10 [.      70      79 ..      70      83 .. 0.86
   3 ?    5.4   0.2   0.00089        16       2      10 ..      90      98 ..      89     103 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.054
                B-TTT CS
  HscB_4_cys 19 FCpqC 23
                FC +C
  KHJ30706.1 53 FCKRC 57
                ***** PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.00034
                -B-SSS--B- CS
  HscB_4_cys  1 PrCWnCGgpg 10
                P+C nCG+ +
  KHJ30706.1 70 PSCGNCGSTM 79
                9******987 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.00089
                B-SSS--B- CS
  HscB_4_cys  2 rCWnCGgpg 10
                rC nCGgp 
  KHJ30706.1 90 RCKNCGGPH 98
                8******95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       949  (0.052931); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1241.43
//
Query:       KHJ30707.1  [L=316]
Description: putative ph domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-11   42.9   0.1    9.8e-11   42.1   0.1    1.3  1  PH_9      Pleckstrin homology domain
    6.3e-06   26.6   0.0    1.3e-05   25.6   0.0    1.5  1  PH        PH domain
  ------ inclusion threshold ------
      0.026   15.0   1.4      0.052   14.0   0.1    2.2  2  PH_11     Pleckstrin homology domain
      0.053   13.6   0.0       0.11   12.6   0.0    1.6  1  bPH_5     Bacterial PH domain


Domain annotation for each model (and alignments):
>> PH_9  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.1   0.1   2.2e-14   9.8e-11       4     114 ..       6     112 ..       4     115 .. 0.92

  Alignments for each domain:
  == domain 1  score: 42.1 bits;  conditional E-value: 2.2e-14
        PH_9   4 givqrkllleskgkktplkkrgWkevyavlkklvLylykdeeesesaetedlkslknakllgkirlhhaLaekasdYkkkshvFrLqtadgaeylfqts 102
                  i++rk+ ++++ +++  ++r+W+ v + l+++ L+lyk  + +   ++   +s++   ll + +lh a   +a+dY kk+hv r++ a+  ++l+   
  KHJ30707.1   6 TILKRKMEFHNAIQRA--SNRKWHRVMVSLQGTALKLYKPSKGKFGMRYAGQNSIPPL-LLRSYNLHYAQVGVATDYAKKKHVIRIR-AETEQFLLSCD 100
                 6899************..**********************999999999988888777.9999****999999*************8.57789****** PP

        PH_9 103 dakevqeWvdti 114
                 + + + +W++ +
  KHJ30707.1 101 KLETLVNWIQSL 112
                 *********976 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0     3e-09   1.3e-05      16     104 ..      22     116 ..       7     117 .. 0.81

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 3e-09
                 C..SEEEEEEEEETTEEEEESST.......TCTTESSE...EEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHHHHH CS
          PH  16 k..swkkrwfvLkdsellyyknd.......ksekdkep...kgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWikaiqs 102
                 +  +w++  + L+++ l +yk++          +++ p    +s++l+ ++v     t+++k+k+++++r      ++++ll+++  e + +Wi++++ 
  KHJ30707.1  22 SnrKWHRVMVSLQGTALKLYKPSkgkfgmrYAGQNSIPpllLRSYNLHYAQVGVA--TDYAKKKHVIRIRAE----TEQFLLSCDKLETLVNWIQSLST 114
                 2459*********************999996666666645567777777777654..9***********888....69*******************98 PP

                 HH CS
          PH 103 ai 104
                 ai
  KHJ30707.1 115 AI 116
                 87 PP

>> PH_11  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   1.2e-05     0.052       9     103 ..      22     113 ..      15     115 .. 0.65
   2 ?   -1.9   0.1         1   4.5e+03      44      68 ..     187     211 ..     160     223 .. 0.63

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.2e-05
       PH_11   9 gskaWkrrwfavlkdgvLeyYksekkkv.vkhviklSngseaklkadlisaalfkidsirssksddllleistetkifflkgdsneeteeWvealk 103
                 +++ W r  ++ l+ + L++Yk +k k  +++  + S      l+    ++a+  ++ + ++k+    + i  et+ f l++d+ e+  +W+++l 
  KHJ30707.1  22 SNRKWHR-VMVSLQGTALKLYKPSKGKFgMRYAGQNSIPP-LLLRSYNLHYAQVGVATDYAKKK--HVIRIRAETEQFLLSCDKLETLVNWIQSLS 113
                 4445754.4559**********999999555543333221.22233333344445555555555..5556677888899**************997 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1
       PH_11  44 Sngseaklkadlisaalfkidsirs 68 
                 S   +  l+++l s  l+ ids  s
  KHJ30707.1 187 SEEDQPTLNFSLCSTYLPSIDSTSS 211
                 3334455666666666666666655 PP

>> bPH_5  Bacterial PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.5e-05      0.11      56      98 ..      70     111 ..      43     113 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.5e-05
       bPH_5  56 ikdigkarmyatrlkrvlllktkdkiygisPedleeFkeales 98 
                 + ++g a+ ya++ k v+ ++++++++++s+++le++++ ++s
  KHJ30707.1  70 YAQVGVATDYAKK-KHVIRIRAETEQFLLSCDKLETLVNWIQS 111
                 678999999***9.***********************987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       631  (0.0351944); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2220.20
//
Query:       KHJ30708.1  [L=146]
Description: putative cofilin tropomyosin-type actin-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.2e-23   81.1   0.0    5.9e-23   81.0   0.0    1.0  1  Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein


Domain annotation for each model (and alignments):
>> Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.0   0.0   3.3e-27   5.9e-23       2     118 ..      10     129 ..       9     132 .. 0.94

  Alignments for each domain:
  == domain 1  score: 81.0 bits;  conditional E-value: 3.3e-27
                  HHHHHHHCTTT..SSEEEEEEECTT.TEEEEEESS-.HHHHHHHHHHTTT-EEEEEEEEEECCSECCEEEEEEEEE--TTS-HHHHHHHHHHHHHHHH CS
  Cofilin_ADF   2 keafkelksgk.ktkyilfkidddk.eeivveeege.tyeelreelpeseprYavydveyehddeskrsklvfIswvPdsapikqkmlyasskdalkk 96 
                  ++a++ ++++k   +++++++   + + ++++ +g+  ++el+e+l+ s+++Ya+ +vey +d eskr k++++ w+++ +++++k+ ++  ++a+k+
   KHJ30708.1  10 LQAYNAVREDKnASNWLILSYVAASgNRLKLDCTGTgGLSELAEKLDPSQAQYAYARVEYANDTESKRVKFILVIWIGEYTKVMRKARVSIESGAVKQ 107
                  69**********99******988888*******999978****************************************88***************** PP

                  HCTTSE.EEEEE-CGGCCSHHHH CS
  Cofilin_ADF  97 elkgis.veieatdldelteeel 118
                   l g + +++ a+d+ +l+e+++
   KHJ30708.1 108 IL-GHHsIQVDARDKLDLDEKDV 129
                  **.666369***********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1131.19
//
Query:       KHJ30709.1  [L=440]
Description: putative gdp-mannose pyrophosphorylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      5e-30  104.9   0.0    6.4e-30  104.5   0.0    1.2  1  NTP_transferase  Nucleotidyl transferase
    1.2e-13   50.2   4.8    2.7e-07   30.0   0.1    3.7  3  Hexapep          Bacterial transferase hexapeptide (six repea
    3.9e-07   30.6   0.0      6e-07   30.0   0.0    1.3  1  NTP_transf_3     MobA-like NTP transferase domain
     0.0011   18.0   0.2        1.2    8.0   0.1    2.3  2  Fucokinase       L-fucokinase
  ------ inclusion threshold ------
      0.055   13.2   3.7       0.68    9.7   0.0    3.6  4  Hexapep_2        Hexapeptide repeat of succinyl-transferase
       0.19   11.4   0.0       0.37   10.5   0.0    1.5  1  IspD             2-C-methyl-D-erythritol 4-phosphate cytidyly


Domain annotation for each model (and alignments):
>> NTP_transferase  Nucleotidyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.5   0.0   2.1e-33   6.4e-30       1     195 [.      19     216 ..      19     275 .. 0.92

  Alignments for each domain:
  == domain 1  score: 104.5 bits;  conditional E-value: 2.1e-33
                      EEEEE--S..--GGGTTCCTTSSGGGSEETTETETTHHHHHHHHH.TT-SEEEEEEETTTHHHHHHHHTTSGGGT...SEEEEEEESS--BGGH CS
  NTP_transferase   1 kavILaGG..sGtRLwPLtrtlakklvpvlgkerliqatlsrlan.sgieeiivvltqehsflveeqlkegskfg...vevlialepegkgtAd 88 
                      kavIL+GG  +GtR++PL+ +l+k+l+ v+g  ++i ++l+++++   i+e ++ + +++++ ++  +k+ s+ +   +++ ++ e +  gtA+
       KHJ30709.1  19 KAVILVGGpsRGTRFRPLSLDLPKPLFEVAGH-PIIWHCLTAISKlPHIQE-VCMIGYYDEHVFRGFIKDSSQ-EfphIKIVYLREYQALGTAG 109
                      79******888*********************.***********9899999.999999******999999885.44699*************** PP

                      HHHHTHHHHTTSSE..EEEEETTEEEESTTHHHHHHHHHTHSSTTSEEEEEEESS-CTTSEEEEEC.TTSBEEEEECS-SSHSHCSEECCSEEE CS
  NTP_transferase  89 AvalaaelledeksdelvlvLggDhlikdayeeavkkaiekaakgtvtfgivpveeateyGviead.eegrverfvEKPkeakaselassGiYv 181
                       ++ +++ + + k +e ++vL++D+ ++  +++++k + +k+a+  ++   v v++a+++G+i  d  ++rv + vEKP+    s+l++ G+Y+
       KHJ30709.1 110 GLYHFRDAILKGK-PERLFVLNADVCCSFPLNDMLKLFDDKQAEAVILGTRVTVDAASNFGCIVSDpLSHRVLHYVEKPESHI-SNLINCGVYL 201
                      *************.7****************************9999*******************7678***********99.********** PP

                      EETTHHHHHHH.CCH CS
  NTP_transferase 182 fnsevllflak.dle 195
                      f +e +   +k  ++
       KHJ30709.1 202 FLTECIFPSIKsAIK 216
                      *99988777774444 PP

>> Hexapep  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.1   9.2e-11   2.7e-07       2      35 ..     314     347 ..     313     348 .. 0.96
   2 !    5.3   0.0    0.0057        17      18      36 .]     365     382 ..     349     382 .. 0.76
   3 !   14.9   0.3   5.5e-06     0.016       2      33 ..     393     424 ..     392     426 .. 0.93

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 9.2e-11
                 EEEETTEEE-TTEEEETTEEE-TTEEEETTEEEE CS
     Hexapep   2 tvIGsnvlIgpfaviggnVkIGdnvkIgagvvig 35 
                 ++I+  ++I+p a++g+nV IG++v++g+gv+i+
  KHJ30709.1 314 VFIHPTATIDPTAKLGPNVSIGPRVVVGSGVRIK 347
                 89******************************96 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0057
                 TTEEE-TTEEEETTEEEES CS
     Hexapep  18 gnVkIGdnvkIgagvvigg 36 
                 +  ++G n+++ga++++ g
  KHJ30709.1 365 N-SILGWNSRVGAWARVEG 382
                 4.55***********9975 PP

  == domain 3  score: 14.9 bits;  conditional E-value: 5.5e-06
                 EEEETTEEE-TTEEEETTEEE-TTEEEETTEE CS
     Hexapep   2 tvIGsnvlIgpfaviggnVkIGdnvkIgagvv 33 
                 ++I ++v++ + +++g ++ +Gd v++ ++v 
  KHJ30709.1 393 STIKNGVKVQSITILGKDCRVGDEVRVQNCVC 424
                 6899*************************986 PP

>> NTP_transf_3  MobA-like NTP transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0     2e-10     6e-07       1     125 [.      20     160 ..      20     230 .. 0.73

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 2e-10
                   EEEEEES..S-TTTTT.....THHHHCCCCCCHHHHHHHHHCTT..-CEEEEECSHCHHHH......HHTTC.TS-EEE-TTSS.-SHHHHHHHHHH CS
  NTP_transf_3   1 aviLAGG..rSsRmgg.....dKallplggkpllervldalraag.vdevvvvggdeevla......alarl.gvrvvededpg.kgplaslaaalr 81 
                   aviL GG  r++R+       +K+l +++g p+++++l a+++++ ++ev+++g ++e           +++  +++v+ ++++  g++++l++  +
    KHJ30709.1  20 AVILVGGpsRGTRFRPlsldlPKPLFEVAGHPIIWHCLTAISKLPhIQEVCMIGYYDEHVFrgfikdSSQEFpHIKIVYLREYQaLGTAGGLYHFRD 116
                   79*****77778997344678***********************659*******99743211222222233334888888777549*********** PP

                   HH...SSSCEEEEETT-TT--HHHHHHHHHCHHHHTSSEEEEESSS CS
  NTP_transf_3  82 aaa..dadavlvlacDmPlltpelverllaaaaasgadvvvptyeg 125
                   a+   + ++++vl +D+ +  +  ++ +l+ +++++a++v++ ++ 
    KHJ30709.1 117 AILkgKPERLFVLNADVCC--SFPLNDMLKLFDDKQAEAVILGTRV 160
                   *443599*********977..4447777777777777777766654 PP

>> Fucokinase  L-fucokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0   0.00046       1.4      46      98 ..     120     176 ..     111     196 .. 0.76
   2 !    8.0   0.1   0.00039       1.2     262     330 ..     349     425 ..     311     439 .. 0.71

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00046
  Fucokinase  46 krmkpGvlvtssDvlllf....dseeisfdkagvtalavpstldigtnHGVfvlddq 98 
                 k++++ ++v+++Dv   f      + ++ ++a++++l ++ t+d ++n G +v+d+ 
  KHJ30709.1 120 KGKPERLFVLNADVCCSFplndMLKLFDDKQAEAVILGTRVTVDAASNFGCIVSDPL 176
                 46677889999999987777644445566677***********************98 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00039
  Fucokinase 262 aiknkkekkkesavvinSvlessvsvgegsvie..........hsslkgnvsigsnsivsglelesseeslelpddtil 330
                  i  + +++k+ ++++nS+l  + +vg+ + +e           s++k++v+++s +i+ g + + ++e +++++ ++l
  KHJ30709.1 349 SIVLEDSEIKHDSCILNSILGWNSRVGAWARVEgtptplnshtTSTIKNGVKVQSITIL-GKDCRVGDE-VRVQNCVCL 425
                 34455566688889999999999999999888888888877777778888888888887.444444433.667766666 PP

>> Hexapep_2  Hexapeptide repeat of succinyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.82   2.5e+03      18      28 ..     154     164 ..     153     164 .. 0.87
   2 ?    9.7   0.0   0.00023      0.68       8      32 ..     314     346 ..     314     348 .. 0.84
   3 ?   -2.1   0.0       1.1   3.4e+03       9      17 ..     367     375 ..     365     382 .. 0.61
   4 ?    1.9   0.2     0.064   1.9e+02       3      11 ..     406     414 ..     404     422 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.82
                 EEE-TT-EE-T CS
   Hexapep_2  18 vslGdncvvga 28 
                 v+lG +++v+a
  KHJ30709.1 154 VILGTRVTVDA 164
                 79999999987 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00023
                 -EE-TT-EE......S..EEE-TT-EE-TT-EE CS
   Hexapep_2   8 CliGanagi......G..vslGdncvvgaGvvi 32 
                 ++i++ a+i      G  vs+G ++vvg+Gv i
  KHJ30709.1 314 VFIHPTATIdptaklGpnVSIGPRVVVGSGVRI 346
                 699999998777777688************966 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.1
                 EE-TT-EES CS
   Hexapep_2   9 liGanagiG 17 
                 ++G n+ +G
  KHJ30709.1 367 ILGWNSRVG 375
                 555555443 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.064
                 EE-TT-EE- CS
   Hexapep_2   3 iIGdnCliG 11 
                 i G++C +G
  KHJ30709.1 406 ILGKDCRVG 414
                 556666666 PP

>> IspD  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00012      0.37      10      61 ..      29      82 ..      18      98 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00012
                SSCT...T-SSS-GGGSEETTEEHHHHHHHHHHCTTTEEEEEEEE-GGGHHHHHH CS
        IspD 10 sGkR...mkaglpKqflelkgqtllehtvdallaskavdkivvvvseddteefeq 61
                +G+R   +  +lpK ++e++g++++ h ++a+ + ++++++ ++   d+ + f+ 
  KHJ30709.1 29 RGTRfrpLSLDLPKPLFEVAGHPIIWHCLTAISKLPHIQEVCMIGYYDE-HVFRG 82
                56662234679*****************************998877666.55555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       327  (0.0182386); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3349.01
//
Query:       KHJ30710.1  [L=212]
Description: hypothetical protein EV44_g2380 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.15   11.8   0.3       0.34   10.7   0.0    1.6  2  HTH_psq   helix-turn-helix, Psq domain


Domain annotation for each model (and alignments):
>> HTH_psq  helix-turn-helix, Psq domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.38   6.8e+03      28      35 ..     124     131 ..     124     139 .. 0.72
   2 ?   10.7   0.0   1.9e-05      0.34       6      38 ..     163     196 ..     161     201 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.38
     HTH_psq  28 iPrsTLwr 35 
                 ++ sTL+r
  KHJ30710.1 124 VNDSTLRR 131
                 67799985 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 1.9e-05
     HTH_psq   6 aaAleavvnGk.mSirkAArkYgiPrsTLwrrkr 38 
                 +aA+++ +nG    +++AAr Y+    +L++r++
  KHJ30710.1 163 EAAIQDLQNGDfSCVAEAARAYNLKEKSLRMRVK 196
                 69*********6669**************98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       745  (0.0415528); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1581.85
//
Query:       KHJ30711.1  [L=731]
Description: putative lim domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-21   76.6  21.3    3.1e-11   43.3   7.3    2.3  2  LIM        LIM domain
  ------ inclusion threshold ------
      0.061   13.6   1.1          3    8.2   0.1    2.6  2  RNA_pol_N  RNA polymerases N / 8 kDa subunit
          3    7.8  10.6        4.1    7.4   2.4    2.6  2  C1_1       Phorbol esters/diacylglycerol binding domain (C1 d
        6.7    7.5   7.7       0.79   10.5   2.1    2.4  3  FliD_N     Flagellar hook-associated protein 2 N-terminus


Domain annotation for each model (and alignments):
>> LIM  LIM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   7.3     7e-15   3.1e-11       1      56 [.     586     643 ..     586     645 .. 0.91
   2 !   39.1   6.1   1.5e-13   6.5e-10       1      56 [.     649     702 ..     649     704 .. 0.92

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 7e-15
                 -TTT--BE-TTTEEEEETTE...EEETTTSB-TTT-SB-CTT.CEEETTEEEEHHHHHH CS
         LIM   1 CagCnkkiadrelvlkaldk...vwHeeCFtCsdCqkeLkegsfyekdgklyCkkdylk 56 
                 C++C++ i+ + +  +a ++   ++H+eCF+C  Cqk+++++s+y++++ +yC+++y++
  KHJ30711.1 586 CKECGEDIYGKSVS-SADGRltgRYHKECFVCRICQKPFNSTSCYVINDAPYCEAHYHE 643
                 *********99998.688874447*********************************86 PP

  == domain 2  score: 39.1 bits;  conditional E-value: 1.5e-13
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT.CEEETTEEEEHHHHHH CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegsfyekdgklyCkkdylk 56 
                 C  Cnk+i+ +++    + ++ H++C++C+dC++ L+++ ++e++g lyCk+d ++
  KHJ30711.1 649 CFTCNKGIEGKYVE-TDRRQKHHPSCLRCADCGHILQNN-YFEMNGLLYCKRDAYQ 702
                 999******99999.589999******************.7***********9776 PP

>> RNA_pol_N  RNA polymerases N / 8 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.1   0.00067         3       7      25 ..     649     667 ..     648     672 .. 0.87
   2 ?    3.3   0.1     0.022        99       6      25 ..     675     694 ..     673     716 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00067
                 -TTT--B-STHHHHHHHHH CS
   RNA_pol_N   7 CFtCGkvigekweeylell 25 
                 CFtC+k i  k+ e+ ++ 
  KHJ30711.1 649 CFTCNKGIEGKYVETDRRQ 667
                 ************9988775 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.022
                 S-TTT--B-STHHHHHHHHH CS
   RNA_pol_N   6 rCFtCGkvigekweeylell 25 
                 rC  CG ++++++ e++ ll
  KHJ30711.1 675 RCADCGHILQNNYFEMNGLL 694
                 9************9999887 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   2.4   0.00091       4.1       9      37 ..     581     622 ..     576     640 .. 0.85
   2 ?    4.5   1.4     0.007        32      11      36 ..     646     681 ..     639     686 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00091
                 SS--B-TTT-SB-............-S.SSS-EEEETTT--E CS
        C1_1   9 kqptfCkhCgefl............wg.kekqglkCswCkll 37 
                 k++++Ck+Cge +             g   k ++ C+ C+  
  KHJ30711.1 581 KSKGKCKECGEDIygksvssadgrlTGrYHKECFVCRICQKP 622
                 6899*********99999999999878788999999999865 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.007
                 --B-TTT-SB-.........-S.SSS-EEEETTT-- CS
        C1_1  11 ptfCkhCgefl.........wg.kekqglkCswCkl 36 
                  + C +C++ +         ++ +   +l+C++C+ 
  KHJ30711.1 646 GSICFTCNKGIegkyvetdrRQkHHPSCLRCADCGH 681
                 568************999874436667889999975 PP

>> FliD_N  Flagellar hook-associated protein 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0         2   8.9e+03      64      94 ..      87     119 ..      63     120 .. 0.52
   2 ?   -2.9   0.1       2.6   1.2e+04      65      65 ..     262     262 ..     231     285 .. 0.50
   3 ?   10.5   2.1   0.00018      0.79      16      76 ..     427     488 ..     415     505 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2
                 EEEECST.TTEEEEEET.TS-SEEEEEEEEE-- CS
      FliD_N  64 katssde.svvtatass.gaaagsysieVkqlA 94 
                  ++s +e + ++a  +  +  ++ + ++V+++A
  KHJ30711.1  87 GTSSDNEpNQMSAVINPkSIDNSDFFLKVNKIA 119
                 233344455566655442455666777777776 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.6
                 E CS
      FliD_N  65 a 65 
                  
  KHJ30711.1 262 K 262
                 1 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 0.00018
                 XXX.XXXXXXXXXXXXXXXHHHHHHHHHHHHHHHHHHHHHXXGGGGGXEEEEECSTTTEEE.E CS
      FliD_N  16 era.kldkleqkktklewkqsayrelnsklsnlksalsalsksstfsakkatssdesvvta.t 76 
                 e++   + ++ + +k++ + s+++ +n+ +++++s++s l  ++ +s+ + +ss+++ +++ t
  KHJ30711.1 427 EENsNSKSYDPNIQKYQRRNSKLSHINNLMADIESTMSGLGLNERLSTGSSSSSSTQ-ISIpT 488
                 555345569999***********************9997766677755444444444.35523 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (731 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       810  (0.0451782); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 5086.09
//
Query:       KHJ30712.1  [L=473]
Description: hypothetical protein EV44_g6291 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (473 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3465.18
//
Query:       KHJ30713.1  [L=402]
Description: putative plasma membrane low affinity zinc ion protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.4e-66  222.6   2.6    8.6e-66  222.4   2.6    1.0  1  Zip       ZIP Zinc transporter


Domain annotation for each model (and alignments):
>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.4   2.6   4.8e-70   8.6e-66       2     332 ..      48     398 ..      47     399 .. 0.81

  Alignments for each domain:
  == domain 1  score: 222.4 bits;  conditional E-value: 4.8e-70
         Zip   2 llkilaiiaililsllgllgpllvpkiskl.lsklllslllafavGvllgtaflhLlPealealeesqleeehth.plagllvllGflllllveklltm 98 
                 +l+i +i++i + s +g l+p++++k +++  s+++++ +++f++Gv+l+taf+hLl +a+eal++++l +++t+  +a+++vl+++++++++e l+++
  KHJ30713.1  48 GLRISSIFVIWFGSTAGALIPIFLSKSKRTnVSSWIFASMKYFGSGVILATAFIHLLGPATEALSSPCLTGRITEySWAEGIVLMSIFVMFFIELLAHQ 146
                 689**********************999999****************************************96667**********************9 PP

         Zip  99 ivek..ksshkektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeqas..........eeedkeklaslkvr 185
                 +     + + +e +++  + +s+ ++++k+ ++ + ++   + +++ +a  + d +  + +++ +  +++++++            e+++   +++ ++
  KHJ30713.1 147 YDVFgnDFHDSEVISSSINYDSKWAERSKELPKLSDSNGAPNSNDAGSASNSLDREDLTTRNSVSNVQNGSRATVnsqnpinndpMESRNNYFSAQLTA 245
                 866677555555555555555554444444444444443333333333322222222222222222222222222445556666445555566777788 PP

         Zip 186 aiilllglilHsfidGLAlGvssssstgislfiAvllHelpeelglgaiLlkaglsrkkav...llnllfaltaplGiliGilvrs..isessgaeivs 279
                  +il++g+i+Hs+++GL l+   +s+++ +l+ ++++H+ +e+lglg++L++  +++ k +   +   +++lt+p++i+iGi+v +  +++s++a iv+
  KHJ30713.1 246 IFILEFGVIFHSIFIGLTLA-VTGSDEFNILYTVLVFHQTFEGLGLGSRLASVTWPKGKSWlswVFGAAYGLTTPIAIAIGIGVHEsfKPGSQRATIVN 343
                 899*****************.5688999*****************************99998999999******************************* PP

         Zip 280 gillalsaGtflYvalvellphEllnek..gssslkqsllqllglllGfalmlll 332
                 gi++++saG+++Y++lvel+++E+ ++k   + s k+ + + l + +G+a+m+ll
  KHJ30713.1 344 GIFDSISAGILIYTGLVELMANEFIYNKemYKASPKTIIFACLNMSFGAAVMALL 398
                 ****************************997789*******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 3092.01
//
Query:       KHJ30714.1  [L=395]
Description: putative mitochondrial inheritance component mdm10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     6e-147  490.3  10.0     4e-129  431.5   3.7    2.0  2  MDM10     Mitochondrial distribution and morphology protein 1
    0.00024   20.7   0.0        1.8    7.9   0.0    3.6  4  Porin_3   Eukaryotic porin


Domain annotation for each model (and alignments):
>> MDM10  Mitochondrial distribution and morphology protein 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  431.5   3.7  4.5e-133    4e-129       1     321 [.       1     314 [.       1     320 [. 0.94
   2 !   63.7   0.5   1.6e-21   1.4e-17     375     465 .]     318     395 .]     310     395 .] 0.90

  Alignments for each domain:
  == domain 1  score: 431.5 bits;  conditional E-value: 4.5e-133
       MDM10   1 MlefmdYvqkaFeeatnWnrdnsYsnltatsdalldfsiPeglklqlsslstpnfatsytLstvgvidGslsYLyssvpLenlvsqsesipLqdlvrgY 99 
                 Ml+fmdY+++++++a++Wn+dnsYs+lt+t++ ll+f+ P+gl+lqlssls+pnfatsy+L ++g++dGs+sYLyss++L  l + +++i L++++r+Y
  KHJ30714.1   1 MLDFMDYIKNTWHSASQWNQDNSYSQLTSTAKDLLEFEPPRGLRLQLSSLSSPNFATSYSLCSTGLVDGSISYLYSSIKLYPLFK-TSKIDLRHIIRSY 98 
                 9***********************************************************************************9.999********** PP

       MDM10 100 rqieplla.aelkekeakeeakekkkkksLlygrlylPssaLeAlvikrlspttqlqlkavssqklenggtllallqkdtgkysqellvstdeaLlGlr 197
                 +qi++l + ++++++e  ++ ++  kk +L+ygr+ylP+++LeAl+i+rlspt ql+++avs++ l+n+gt+lal q+d+gkys+e+l+std++L+G+r
  KHJ30714.1  99 KQIQELCEsKDSQSDEPWNKGEKLVKKGTLMYGRMYLPQTTLEALYIRRLSPTQQLSVSAVSDSCLKNKGTILALHQYDVGKYSVETLYSTDGGLIGVR 197
                 *****98735556667788889999************************************************************************** PP

       MDM10 198 glynfGgdaekkkasekasklnsslannsiysllSaGaElyygtlskspglStglRfaTlsastgkPltlTltlnPllGsisstYsvkasenstlssry 296
                 glynfG d++k k+   +       ++++ y+++S+GaE+yyg l+ks+g+S g +faTl++++g P+  T+tlnPl+G+is+tY+vka++ ++l+s++
  KHJ30714.1 198 GLYNFGMDTRKGKKILVQ-------NEDRFYGRFSIGAEIYYGGLNKSGGMSFGGKFATLPTHKGIPIITTFTLNPLMGNISTTYAVKAGKDISLCSKF 289
                 ******998766652222.......234589******************************************************************** PP

       MDM10 297 dFNvYSyeSnlslGmeLwrksrkkk 321
                 dFN+YSyeS+++lG eLwr ++k+ 
  KHJ30714.1 290 DFNFYSYESDFVLGAELWRMKNKSP 314
                 *******************999865 PP

  == domain 2  score: 63.7 bits;  conditional E-value: 1.6e-21
       MDM10 375 eesfqakleWrldkeekeeekkkekkeeeefssVlKarldqdlnvkllWeGrvkslLvsaGvelslkkleksselklksfrklGleiqYss 465
                 e+s  akl+Wr+d +e++       k++ee s+VlK+r dq+++++llWeG vk+l++s+G+ +++k+l+       +s  ++Gle+qYss
  KHJ30714.1 318 ERSMAAKLQWRQDSAEEK------IKAQEEISGVLKVRADQNWRIGLLWEGHVKELIFSLGSFIDMKRLD-------QSLGTIGLELQYSS 395
                 78899******9988766......46799****************************************9.......66899********8 PP

>> Porin_3  Eukaryotic porin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.7   0.0    0.0019        17       4      68 ..      23      81 ..      22     107 .. 0.85
   2 ?   -1.9   0.0      0.21   1.9e+03     242     262 ..     142     162 ..     136     170 .. 0.78
   3 !    7.9   0.0    0.0002       1.8     144     221 ..     223     305 ..     219     311 .. 0.87
   4 !    3.3   0.0    0.0053        47     228     270 .]     344     385 ..     319     385 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0019
                -CCCCCHHHHHHHHCCHTTTECEEEEEEEECCECCEEEEEEEETTTS-ECEEEEEEEEETCCCEE CS
     Porin_3  4 tyedlgkeakdllpkdYhfeglkldvtkktslgvaFqvshsfslgsgkvsysfeakykdkgltlt 68
                +y+ l++ akdll       gl+l++++   ++++F +s s   ++g+v +s++ +y    ++l+
  KHJ30714.1 23 SYSQLTSTAKDLLEFE-PPRGLRLQLSS--LSSPNFATSYSLC-STGLVDGSISYLYS--SIKLY 81
                58999*******9988.9**********..89*******9988.67799999999998..66654 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.21
                 EEEEEEECTTEEEEEEEEEEC CS
     Porin_3 242 llleqkLrpgvtltlsaelDh 262
                 +l+ ++L p+ +l++sa+ D 
  KHJ30714.1 142 ALYIRRLSPTQQLSVSAVSDS 162
                 678888999999999988875 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.0002
                 TEEEEEEEEEECTTTCCEEEEEEEEEEEC..........SEEEEEEEEETTTEEEEEEEEECCTTEEEEEEEEEETTEEEEEEEEEEE CS
     Porin_3 144 glalGaeavydtasgkltkyaaalsyaar..........dwiaslqllnnggaltasyyqkvsekvevgaeltlnassqestttlGak 221
                 ++++Gae+ y   + k++     +s+  +            i +++l+   g+++ +y  k+ +++++ +++  n+ s es + lGa 
  KHJ30714.1 223 RFSIGAEIYYGGLN-KSGG----MSFGGKfatlpthkgiPIITTFTLNPLMGNISTTYAVKAGKDISLCSKFDFNFYSYESDFVLGAE 305
                 78999999998885.6663....666666666799999*99******999***********************************986 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.0053
                 EEEEEEEECTTEEEEEEEEEECTTEEEEEEEEEECCCTEEEEE CS
     Porin_3 228 ttvkakidsngkvgllleqkLrpgvtltlsaelDhkknahkfG 270
                  ++k + d n+++gll+e    + + ++l+  +D k+++  +G
  KHJ30714.1 344 GVLKVRADQNWRIGLLWEGH-VKELIFSLGSFIDMKRLDQSLG 385
                 379***************99.5667899999999988776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2784.59
//
Query:       KHJ30715.1  [L=218]
Description: putative c-8 sterol isomerase (erg-1) [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-82  276.4   0.0    1.7e-82  275.8   0.0    1.2  1  ERG2_Sigma1R  ERG2 and Sigma1 receptor like protein
  ------ inclusion threshold ------
      0.058   13.3   0.4       0.66    9.9   0.1    2.5  2  UCR_6-4kD     Ubiquinol-cytochrome C reductase complex, 6.4kD


Domain annotation for each model (and alignments):
>> ERG2_Sigma1R  ERG2 and Sigma1 receptor like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  275.8   0.0   1.9e-86   1.7e-82       3     207 ..      22     215 ..      20     217 .. 0.98

  Alignments for each domain:
  == domain 1  score: 275.8 bits;  conditional E-value: 1.9e-86
  ERG2_Sigma1R   3 lllllvalvylldklleknyifdpkelqelakkaiakhendtkavleeivkelkkeypdelinlleeeewvfnnaGgamGamlilhaSitEYlilFG 99 
                   ++++l +++++ld+ le++yif+p+ l++l+k+ai++h n+t+a+++e+++el++++p  +inl   eew+fnnaGgamGam+ilhaS         
    KHJ30715.1  22 FTTILSLIFTYLDTKLENFYIFTPDYLHDLSKRAISNHGNNTRAIVSELTRELSEKFPGGYINLD--EEWIFNNAGGAMGAMYILHAS--------- 107
                   6788999******************************************************9988..9*******************9......... PP

  ERG2_Sigma1R 100 tavgteGhtGrhladdyftiLkGeqlaakpgelekevYkpGdvhhlkrgeakqykmeegcfaLeyarGwipsmlpFgfadtlsstlDfvtlyktvri 196
                   tavgteGhtGrh+addyf+iL+G qla++pg++e+evY++G+vhhl+rg++kqykme+gcfaLeyarGwip+ml+Fgfad lsstlDf+tl++t+++
    KHJ30715.1 108 TAVGTEGHTGRHTADDYFNILTGVQLAYTPGSFEPEVYPQGSVHHLPRGNVKQYKMENGCFALEYARGWIPPMLFFGFADGLSSTLDFPTLWRTTWV 204
                   9************************************************************************************************ PP

  ERG2_Sigma1R 197 taremiknllk 207
                   t+++mi nl +
    KHJ30715.1 205 TGKQMILNLAR 215
                   ********986 PP

>> UCR_6-4kD  Ubiquinol-cytochrome C reductase complex, 6.4kD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0     0.073   6.5e+02      10      36 ..      82     107 ..      79     108 .. 0.79
   2 ?    9.9   0.1   7.4e-05      0.66      12      40 ..     171     201 ..     165     206 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.073
                 HHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   UCR_6-4kD  10 yaelaknwvpsavawgavggvalvylt 36 
                 y++l ++w+ + +  ga+g++ +++++
  KHJ30715.1  82 YINLDEEWIFNNAG-GAMGAMYILHAS 107
                 77788888887665.999999999875 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 7.4e-05
                 HHHHHHHHHHHHHHHHHHHH..HHHHCT-HH CS
   UCR_6-4kD  12 elaknwvpsavawgavggva..lvyltDWrl 40 
                 e a+ w+p + ++g+++g+   l + t Wr+
  KHJ30715.1 171 EYARGWIPPMLFFGFADGLSstLDFPTLWRT 201
                 78999************99622446777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       381  (0.0212505); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.20s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1764.12
//
Query:       KHJ30716.1  [L=541]
Description: putative calcium homeostasis endoplasmic reticulum protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-12   47.4   1.2    2.3e-11   44.4   0.2    3.1  3  CTD_bind  RNA polymerase II-binding domain.


Domain annotation for each model (and alignments):
>> CTD_bind  RNA polymerase II-binding domain.
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.4   0.2   1.3e-15   2.3e-11       2      63 .]     103     166 ..     102     166 .. 0.89
   2 ?   -1.3   0.0      0.24   4.2e+03      21      40 ..     168     187 ..     167     200 .. 0.72
   3 ?   -1.5   0.0      0.26   4.6e+03      21      38 ..     429     446 ..     414     452 .. 0.73

  Alignments for each domain:
  == domain 1  score: 44.4 bits;  conditional E-value: 1.3e-15
    CTD_bind   2 LnllYLaNdvlqnskrkqkdef..apaFapvlpeafadayk.kapekikkklkrllniWeernvf 63 
                 L++lYL+Nd+l++  +++ +++  +++ +p+l++++ ++++ k ++k+ +klk+l+ +W+e+n+f
  KHJ30716.1 103 LHVLYLVNDILYHG-KYRINDLliCSKIQPILVSLIGSCASfKGSPKHLSKLKNLILLWKEKNYF 166
                 9************7.3443333369*****************99999*****************9 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.24
    CTD_bind  21 defapaFapvlpeafadayk 40 
                 def++++  +l++a+++ ++
  KHJ30716.1 168 DEFIDSLLLALENALETRKQ 187
                 89999999999999976555 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.26
    CTD_bind  21 defapaFapvlpeafada 38 
                 +++ paF+  l+  fa+ 
  KHJ30716.1 429 SQIPPAFQHSLNANFAHS 446
                 456678888888888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (541 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       753  (0.041999); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 3940.66
//
Query:       KHJ30717.1  [L=589]
Description: putative asparagine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-16   60.9   0.1    1.2e-08   35.0   0.2    3.3  2  Asn_synthase  Asparagine synthase
    7.4e-08   32.3   0.0    2.1e-07   30.9   0.0    1.7  1  GATase_7      Glutamine amidotransferase domain
      2e-06   28.0   0.0    4.5e-06   26.9   0.0    1.5  1  GATase_6      Glutamine amidotransferase domain
  ------ inclusion threshold ------
      0.022   14.2   0.0      0.042   13.3   0.0    1.4  1  DUF3700       Aluminium induced protein


Domain annotation for each model (and alignments):
>> Asn_synthase  Asparagine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   4.8e-05      0.22      16      52 ..     285     323 ..     282     347 .. 0.84
   2 !   35.0   0.2   2.7e-12   1.2e-08     119     258 ..     440     522 ..     431     583 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4.8e-05
  Asn_synthase  16 advpvGalLSGGlDSSliaalaarqsk..splktFsigf 52 
                   + v+v++l+SGGlD +++a la+  ++  +++    ++f
    KHJ30717.1 285 SHVRVAILFSGGLDCTVLARLADDILPhdQEIDLLNVAF 323
                   789********************9998887888888887 PP

  == domain 2  score: 35.0 bits;  conditional E-value: 2.7e-12
  Asn_synthase 119 vkvvLsGeGaDElfgGYpyfykaalsrsrefeklplarslrasllarklrklaellelaeardleelaelyrlkasdsaeaelegedelhrelyldl 215
                    +v+LsG GaDElfgGY+ ++    sr                                                         g + l  el ld+
    KHJ30717.1 440 ARVLLSGFGADELFGGYT-RHTTIFSR--------------------------------------------------------TGFSGLLNELKLDY 479
                   68***************9.99977332........................................................255788899***** PP

  Asn_synthase 216 ktllpgdllrkDrasmahglEaRvPflDhrlvevalrlppelk 258
                    +l + +l r Dr+   +g EaR+PflD rlv++a + p+ +k
    KHJ30717.1 480 DRLGKRNLGRDDRIISNWGKEARFPFLDERLVRWAIEAPVLEK 522
                   *************************************999877 PP

>> GATase_7  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.0   4.7e-11   2.1e-07      52     112 ..      93     164 ..      62     171 .. 0.76

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 4.7e-11
    GATase_7  52 ksDtevllallea...........ewgeealerlnGmfAfaiwdeeekrlllaRDrlGikPLyygedkgdal 112
                 + D +v+  ll++             + ++l+ + G fAf+ +d+ +++l+ aRDrlG ++L y  +++++l
  KHJ30717.1  93 NNDGKVIFDLLQKassiqstseatVEVLRTLRSISGPFAFVFYDHIHRQLYFARDRLGRRSLLYKDKNDNTL 164
                 445566666665556666555545456678999*******************************99986554 PP

>> GATase_6  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0     1e-09   4.5e-06      32     129 ..      65     163 ..      53     165 .. 0.76

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 1e-09
    GATase_6  32 aqPfpsedgrlllvhNGeiynykelreelpalkglafrsrsDtevllalleelG............eevlerlrGmfafaiwdkrentlilardrlgvk 118
                 +qPf+++++ l +  NGe  + +        + ++    ++D  v++ ll+++              ++l+++ G faf+++d+  ++l +ardrlg++
  KHJ30717.1  65 CQPFKNKAESLFFCWNGEAWKIN-------THVIV----NNDGKVIFDLLQKASsiqstseatvevLRTLRSISGPFAFVFYDHIHRQLYFARDRLGRR 152
                 4*****************99997.......22223....58888888888444444444444443446666999************************* PP

    GATase_6 119 plyyavdesgl 129
                  l y+++++++
  KHJ30717.1 153 SLLYKDKNDNT 163
                 ****9987665 PP

>> DUF3700  Aluminium induced protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   9.3e-06     0.042     125     163 ..     122     160 ..     115     172 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 9.3e-06
     DUF3700 125 vvkdleGkfafvlydskaktvfvaldadgsvplyWGiaa 163
                  ++ ++G fafv yd+ +++++ a+d+ g+ +l +  + 
  KHJ30717.1 122 TLRSISGPFAFVFYDHIHRQLYFARDRLGRRSLLYKDKN 160
                 57999**********************999888765555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (589 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:01.90
# Mc/sec: 936.97
//
Query:       KHJ30718.1  [L=752]
Description: putative guanine nucleotide exchange factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-27   95.6   0.1    5.5e-27   94.0   0.1    1.8  1  VPS9      Vacuolar sorting protein 9 (VPS9) domain
    3.4e-15   56.1   3.1    4.7e-15   55.7   0.6    2.7  2  DUF5601   Domain of unknown function (DUF5601)
    8.1e-05   22.2   0.1     0.0013   18.4   0.0    2.6  2  CUE       CUE domain
  ------ inclusion threshold ------
       0.14   12.1   0.6        9.7    6.2   0.1    3.4  3  FAM180    FAM180 family


Domain annotation for each model (and alignments):
>> VPS9  Vacuolar sorting protein 9 (VPS9) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.0   0.1   1.2e-30   5.5e-27       4     103 ..     450     547 ..     448     548 .. 0.97

  Alignments for each domain:
  == domain 1  score: 94.0 bits;  conditional E-value: 1.2e-30
        VPS9   4 aseeLkklseaksPreKlkcllrtieeiteavskseegeslgaDdlLPiliyviikssppnlysnvqfikrFrsktllegeegYylttleaavefiesl 102
                 a  eL k++ ++ Pr+K+ c+l++++ i+ ++  ++ +++++aD ++P+li+vi++++p++l+snvq+i rFr++++l ge gYyl++l  av fie+l
  KHJ30718.1 450 AKRELLKIKAYRAPRDKIICVLNCCKVIFGLL--KHLKSDSSADSFMPLLIFVILQANPEHLVSNVQYILRFRNQEKLVGEVGYYLSSLLGAVHFIENL 546
                 5689****************************..9999***********************************************************98 PP

        VPS9 103 e 103
                 +
  KHJ30718.1 547 D 547
                 6 PP

>> DUF5601  Domain of unknown function (DUF5601)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1       2.4   1.1e+04       2      14 ..     170     182 ..     170     189 .. 0.72
   2 !   55.7   0.6     1e-18   4.7e-15       1      65 []     309     373 ..     309     373 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 2.4
     DUF5601   2 qiksfvrkisqrs 14 
                 +iks+++++s+r+
  KHJ30718.1 170 EIKSIIDQFSERF 182
                 5889999999884 PP

  == domain 2  score: 55.7 bits;  conditional E-value: 1e-18
     DUF5601   1 KqiksfvrkisqrsisieelSemVqdFyqnlaerlnktplyktvsseavedlldeiEkyimtrlY 65 
                 K+++sf++++ ++++ + e++++++dF+ ++++++++ +++ ++s+ + +++ +++Ek++m+rlY
  KHJ30718.1 309 KYLRSFLQEFGKKQWMVHEQVKIISDFLIFISNKMEHCEVWAELSDSEFDNAREGMEKLVMNRLY 373
                 89**************************************************************9 PP

>> CUE  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.11     5e+02      29      40 ..     560     571 ..     557     571 .. 0.87
   2 !   18.4   0.0   2.8e-07    0.0013       2      29 ..     724     751 ..     723     751 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.11
                 TTHHHHHHHHHH CS
         CUE  29 gnvEatinaLLe 40 
                  nvEa+++a+ e
  KHJ30718.1 560 RNVEAAVSAIAE 571
                 69*******966 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 2.8e-07
                 HHHHHHHHHHSTTS-HHHHHHHHHHCTT CS
         CUE   2 eqmletLkemFPdldeevIravLrasng 29 
                 ++ +etL  mFPdld+e+Ir+v  ++ g
  KHJ30718.1 724 SNIAETLACMFPDLDKELIRDVVVQKEG 751
                 678899999*************999876 PP

>> FAM180  FAM180 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.1    0.0022       9.7      74     115 ..     536     577 ..     532     584 .. 0.84
   2 ?    0.6   0.0      0.11     5e+02      67      95 ..     592     620 ..     586     625 .. 0.89
   3 ?    0.0   0.0      0.17   7.6e+02      28      80 ..     665     718 ..     661     737 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0022
      FAM180  74 ledirrliaelsrksgpLkkeDFErtvltlvytaqrlaease 115
                 l ++ + i++l r s +++ eDFEr v   v++  + ++a++
  KHJ30718.1 536 LLGAVHFIENLDRTSLTISDEDFERNVEAAVSAIAEKHQAQT 577
                 556778899**********************99998888544 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.11
      FAM180  67 eeviPkkledirrliaelsrksgpLkkeD 95 
                 +e iP+ l++++ l ++  + ++ L+ +D
  KHJ30718.1 592 NEQIPRYLTEVKSLNTKKPNSAEELQSND 620
                 789***********999999999999888 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.17
      FAM180  28 ellfElLlagleldksgelsi.kDeELaSlrkarkleviceeviPkkledirrl 80 
                 ++lf +  ++ +++++++++  kD+     +k ++ e+i+e  i  ++++  + 
  KHJ30718.1 665 NVLFPISSSQSSMENHEDVTCqKDDQACNFHKENNTEIITERQINTSITETCQS 718
                 578888888888999988776257778889**************9999987664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (752 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1016  (0.056668); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 5017.56
//
Query:       KHJ30719.1  [L=149]
Description: hypothetical protein EV44_g6457 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       222  (0.0123822); expected 358.6 (0.02)
Passed bias filter:                      210  (0.0117129); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1156.90
//
Query:       KHJ30720.1  [L=163]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       979  (0.0546043); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.35
# Mc/sec: 1409.42
//
Query:       KHJ30721.1  [L=266]
Description: hypothetical protein EV44_g6020 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       734  (0.0409393); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.35
# Mc/sec: 2285.70
//
Query:       KHJ30722.1  [L=253]
Description: hypothetical protein EV44_g3463 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.045   14.0   0.0       0.56   10.5   0.0    2.1  2  DXPR_C    DXP reductoisomerase C-terminal domain


Domain annotation for each model (and alignments):
>> DXPR_C  DXP reductoisomerase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.027   4.9e+02      76     108 ..      82     117 ..      80     124 .. 0.73
   2 ?   10.5   0.0   3.1e-05      0.56      45      94 ..     168     219 ..     164     238 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.027
                 TSS-TTHHHHHHHHHHH...TTT....SSHHHHHHH CS
      DXPR_C  76 gkisFldIaeiieevle...seekseaksledilel 108
                 g i++++Iae i+  +    ++++++++sl++i+++
  KHJ30722.1  82 GPINYTKIAEEIRVSVVvdkEKRDNASNSLDNIISY 117
                 67999***9988766655665556778889998865 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 3.1e-05
                 HHHHHHHHHH-TCHHHHHHHHHHHH..HHHHHTTSS-TTHHHHHHHHHHHTT CS
      DXPR_C  45 lklayealkaggtapavlnAAnEva..veaFlegkisFldIaeiieevlese 94 
                 ++l +++l++ g    ++n  nE     + F + +i+Fl I++ ie+ l ++
  KHJ30722.1 168 INLPMKLLSEDGFSGLTMNVENETSlpLKYFTSFQINFLGISRHIEAFLRTR 219
                 56777888899999999******9833589*****************99853 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.20s 00:00:00.63 Elapsed: 00:00:00.35
# Mc/sec: 2138.51
//
Query:       KHJ30723.1  [L=174]
Description: putative protein ilm1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-60  203.7   5.2    1.6e-60  203.5   5.2    1.0  1  Ilm1      Increased loss of mitochondrial DNA protein 1


Domain annotation for each model (and alignments):
>> Ilm1  Increased loss of mitochondrial DNA protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.5   5.2   8.9e-65   1.6e-60       1     162 [.       4     160 ..       4     163 .. 0.97

  Alignments for each domain:
  == domain 1  score: 203.5 bits;  conditional E-value: 8.9e-65
        Ilm1   1 iSsktlirslalfhltlavylltspeviadqelvyllgealridaarsfskpssplAflgvlLlvlalvDlvllslneelavaeywgrqaplRlllffi 99 
                 iS++t+i sl+lfh+tl++++ltsp +iadq+lv+++gea++++++rsf+++s+plAfl+ +L++l+++Dl+++s  +el ++ +wg qap+Rll+ffi
  KHJ30723.1   4 ISASTIISSLSLFHITLGFFFLTSPITIADQTLVFIIGEAMKLPYKRSFENQSPPLAFLAAVLFLLGISDLASISKVDEL-TQLHWGAQAPIRLLIFFI 101
                 8**************************************************************************99**9.8999************** PP

        Ilm1 100 vslyiYlssesswlaakgasyaaavsgvgleeLknrvvftfaflEmmfwfwvfvtLreErrev 162
                 +++y++++s+ss+++a ++sy+++  ++g e Lknrv+ft+af+Em++wfwv+vtLreEr+e+
  KHJ30723.1 102 LTFYAFMFSKSSPIYA-TTSYVPS--SWG-EGLKNRVFFTWAFIEMIAWFWVYVTLREERKEL 160
                 ***************7.5788888..999.*******************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.19s 00:00:00.58 Elapsed: 00:00:00.35
# Mc/sec: 1491.19
//
Query:       KHJ30724.1  [L=984]
Description: putative cytoskeleton organization protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-66  225.2   9.3    2.9e-66  224.0   9.3    1.6  1  NatB_MDM20  N-acetyltransferase B complex (NatB) non catalyti


Domain annotation for each model (and alignments):
>> NatB_MDM20  N-acetyltransferase B complex (NatB) non catalytic subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.0   9.3   1.6e-70   2.9e-66       1     381 [.     296     726 ..     296     758 .. 0.86

  Alignments for each domain:
  == domain 1  score: 224.0 bits;  conditional E-value: 1.6e-70
  NatB_MDM20   1 Wkvwklyldsafklkekkesleevqkfieelikkeeaks.pksRnpyLArLelikrlrkrskkae.eektslsg.lvelileYfekfgsKlccfeDLkk 96 
                 W vw +++ sa +  + ++ ++++++ +e+++  ++  +  + Rn++LA +++ +++  + ++++ + k +l++  + ++++Y+  +g+    ++DL++
  KHJ30724.1 296 WLVWDSLILSAAEFTD-QTYMKRIKSELEAHLDPNSGVEkCWRRNASLAYVKFNFQTCIPFSNDTgKLKDNLFSlETIALIKYLYEYGDTYTVYDDLRP 393
                 99************99.77999999999999987655444899************8888888777544444444788999******************* PP

  NatB_MDM20  97 YleeLskeerkeflekvs..............slskseseseeek...............kekklrrlinalklercl.......geheklseee.... 155
                 +le L  +er +f++ ++              +           k               + + + r +n+lk++++l       +++++l  e+    
  KHJ30724.1 394 FLEVLRLSERIKFTNLLTssvepkdsecddehK-----------KsltlmiekilsndfsSSSGMLRASNNLKFKYLLtcsiperKNYKNLLLEKpsls 481
                 ******************999555555555550...........3455555555555555******************998888855555555557788 PP

  NatB_MDM20 156 .keelvtellaiYraslrl....gaelletesqpsddlallaahalldlseks..........vdstlliqaillLeflltksphNfqlkLlLvrlYll 239
                   ++++ e+++ Y+ + +      ++ll+t+++p dd al+a + l++   ++          ++ ++++qa+l+Lef+ltks+hNfq++ lL+rlY+ 
  KHJ30724.1 482 pLKQIFGEAITLYKTAIKIsnnvAHNLLKTDRHPIDDMALVASMCLVKIGLQEkryedeflnnNKFSHILQAALILEFALTKSKHNFQILILLLRLYSY 580
                 899***********99999888999**********************9887777899******9*********************************** PP

  NatB_MDM20 240 lGagslalklyskLdiKqiQlDtlghllftrlstlgpfs............kalslleqalrfYesaeketpesiakayekgsYskieefiefqerLkn 326
                 lG+gsl +++y++L iKqiQ+Dtl++ +f+r+st +p+             +  + l+  ++fY++   +++ +i+ ++++gsY++i e++e+++ Lk+
  KHJ30724.1 581 LGCGSLSMSIYQRLAIKQIQMDTLSYTFFDRISTFHPHPfenfpdevtdtrSPAEHLRRQQKFYQEVTGQISANIKSSFQYGSYNSIFEMTEVSDSLKH 679
                 ***************************************99999999887666********************************************** PP

  NatB_MDM20 327 SlqramvaleerrlqrllggqyddlaekleaelkedeaepaedridwsklsDnrd 381
                 S+++ ++ +e r+++rll    ++    lea  k+ e++       + klsDn d
  KHJ30724.1 680 SISAVSCLIEDRKISRLLA--PSN---YLEALPKNYEDI---PLLSTPKLSDNND 726
                 ******************9..322...222222222222...2234455666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (984 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       718  (0.0400469); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.30s 00:00:00.99 Elapsed: 00:00:00.45
# Mc/sec: 6635.01
//
Query:       KHJ30725.1  [L=372]
Description: hypothetical protein EV44_g3588 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.014   15.3   0.7      0.025   14.4   0.7    1.4  1  KCNQ_channel  KCNQ voltage-gated potassium channel
      0.053   13.2   2.3       0.07   12.8   0.3    2.2  2  BAR           BAR domain
      0.058   12.5   0.4      0.088   11.9   0.4    1.3  1  APG17         Autophagy protein Apg17
       0.08   13.4   3.7       0.17   12.3   2.4    2.2  2  AvrM-A        Flax-rust effector AvrM-A


Domain annotation for each model (and alignments):
>> KCNQ_channel  KCNQ voltage-gated potassium channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.7   5.6e-06     0.025      50      94 ..      20      64 ..       2      67 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5.6e-06
  KCNQ_channel 50 eevleekslkcdllvedlipalkvviravrilkflvakrkfketL 94
                   e +e++  k++ ++++++  lk++i a+ +lk    k k ket+
    KHJ30725.1 20 FEKMEDRLKKNENSMDEIMGQLKNIISALSVLKTNQDKGKGKETV 64
                  46789999***********************************96 PP

>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3   1.6e-05      0.07      16      61 ..       8      53 ..       2      83 .. 0.83
   2 ?   -1.3   0.1       0.3   1.3e+03     146     172 ..     108     134 ..     102     146 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.6e-05
         BAR 16 vgkaekTkLDedFeelerrldvteklieklvkelkeylqanpgara 61
                + ++ ++k+ ++Fe++e+rl++ e+ +++++ +lk+  +a+  +++
  KHJ30725.1  8 FQNGMEKKMNSRFEKMEDRLKKNENSMDEIMGQLKNIISALSVLKT 53
                666777889**************************99987765555 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.3
         BAR 146 ehkrlDyDaakarlkklktkkskkakd 172
                 ++krlD+ + +++    ++ ks+ ak+
  KHJ30725.1 108 KTKRLDFSSLRETTTLPEKRKSQFAKQ 134
                 679999999999988766666666664 PP

>> APG17  Autophagy protein Apg17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.4     2e-05     0.088      67     110 ..      14      73 ..       3     189 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2e-05
                 IIIIIIIIHHHHHHHHHHHHHHHHHHHHHTSS-TTS.......................S CS
       APG17  67 ekgkeefkdlikeldaanerLektlekLrktkvepsfrpegee................k 110
                 +k++++f++++++l+++ +++++++ +L++++  +s+ +++++                +
  KHJ30725.1  14 KKMNSRFEKMEDRLKKNENSMDEIMGQLKNIISALSVLKTNQDkgkgketveevvtapsQ 73 
                 677888888888888888888888888888888888888876566665566666666661 PP

>> AvrM-A  Flax-rust effector AvrM-A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.4   3.8e-05      0.17      55      99 ..       2      47 ..       1      69 [. 0.83
   2 ?   -1.1   0.0      0.51   2.3e+03      31      54 ..     165     188 ..     162     227 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.8e-05
      AvrM-A 55 efkkkkgekklkkkidviaeklkekakakgkpidekavq.rqfiKe 99
                e+++k++++ ++kk+++  ek+++++k++ + +de++ q +++i  
  KHJ30725.1  2 EVSQKEFQNGMEKKMNSRFEKMEDRLKKNENSMDEIMGQlKNIISA 47
                56789*******************************9887888754 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.51
      AvrM-A  31 laqWeaaEkrlddllkelykkqll 54 
                   q ++ E+++++++ +++++   
  KHJ30725.1 165 VTQLTQREEKVKKYFPDFFPRSEA 188
                 566778889999999999888655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1199  (0.0668749); expected 358.6 (0.02)
Passed bias filter:                      716  (0.0399353); expected 358.6 (0.02)
Passed Vit filter:                        86  (0.0047967); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 2665.52
//
Query:       KHJ30726.1  [L=235]
Description: putative nucleolar protein nop52 variant [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-72  242.3   0.1    5.3e-72  242.1   0.1    1.0  1  Nop52     Nucleolar protein,Nop52


Domain annotation for each model (and alignments):
>> Nop52  Nucleolar protein,Nop52
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.1   0.1     3e-76   5.3e-72       2     214 ..       9     210 ..       8     212 .. 0.96

  Alignments for each domain:
  == domain 1  score: 242.1 bits;  conditional E-value: 3e-76
       Nop52   2 klakkLasndkktRdkalksLrkfLskkkkkklselellkLwkGLFycmWmsDkplvQqelaeeLaelvkslkskeaalkFlkafwetmsreWkgiDkl 100
                 +++k+L +ndk+ Rd+al+sLr++Ls +++  l+ +e+lkLwkGLFycmWmsD+pl Qq la++La+l+  l+  e++++Fl++fw+tm+reW++iD l
  KHJ30726.1   9 PFIKQLVANDKQSRDSALESLRTYLSGRRD--LTPIEILKLWKGLFYCMWMSDRPLAQQGLANSLAQLIFILP-LESVIPFLRGFWQTMQREWTSIDVL 104
                 8***************************84..9****************************************.6************************ PP

       Nop52 101 RlDKfllLvRrvlreslkllkkeewdkelveeylevlketplssedkkvpnglayhladiyldelekvleseleeeeeeedeeevplekllepfvkllk 199
                 R++KfllL+Rr+l++s+++lkk++w+++l++e+l +l e p+++ + +vpng++yh++diy+dele++   e+ +        e+p+e+llep+  l++
  KHJ30726.1 105 RMEKFLLLTRRYLAASFEILKKHKWNENLIQEMLLLLAEIPCNVAELRVPNGIRYHIIDIYVDELERLGYLEDGS--------EAPIEQLLEPLRCLAS 195
                 *******************************************************************87765332........469************* PP

       Nop52 200 kskskallkkikeev 214
                 ks++k+++ k ke++
  KHJ30726.1 196 KSPTKTVRIKAKETL 210
                 **********99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1777.68
//
Query:       KHJ30727.1  [L=332]
Description: putative set domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-18   67.5   0.0    6.1e-18   65.8   0.0    1.8  1  SET       SET domain
    3.3e-16   59.9  12.9    2.5e-15   57.1   9.5    2.3  2  Pre-SET   Pre-SET motif


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.8   0.0   6.8e-22   6.1e-18       1     168 [.     176     299 ..     176     300 .. 0.83

  Alignments for each domain:
  == domain 1  score: 65.8 bits;  conditional E-value: 6.8e-22
                 SCEEEESSXBXTTXEEEEEE.ECCEECHHHHHHHHHH........HTEEEEEXGGXXGGSXHHHHHHHTTSSHHHHHHHHHHHHHHHHHHTHHHHHHHX CS
                 xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET   1 GrGvfAtedIpkgeficeyp.eeiiltkdeadksele........aylfslpeapknlaftkelakasastllqklakdqkqaekedtdaalkasskae 90 
                 G+G+++tedI+kg+f+ +y+ e  ++t +ea+ +  +         ylf l++                                              
  KHJ30727.1 176 GWGLRSTEDIKKGQFVDSYVgE--LITAEEANWRRAQstksqkkdVYLFALDK---------------------------------------------- 226
                 9***************99**55..67777777666666999999*99999992.............................................. PP

                 TTTSXXXHCCCCC.HCCCHEEEETEEEEEECCCGTTGGGCEEXSSSSEEEEEEEE......TTSSEEEEEESSXBXTTEEEEEXT CS
                 xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxx RF
         SET  91 sdlnaskpeagaf.saiagysidaralksgngagplarflNHsCdpNcnltvqnv......lrgprvavfAtrdIkkGeEltidY 168
                   +  ++p+++++      y id   ++  +++    rf+NHsC+pN+  ++++v      + +  +++fA+++I+  +Elt+dY
  KHJ30727.1 227 --F--TDPNSSDErLRGEPYEID--GEYFAGPT----RFINHSCEPNL--RIFAVvrdlanKPFHDLCFFALKEIPRFTELTFDY 299
                 ..1..345555555556667799..66******....***********..5555556**************************** PP

>> Pre-SET  Pre-SET motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.1   9.5   2.7e-19   2.5e-15       4     109 .]      43     157 ..      40     157 .. 0.83
   2 !    3.9   0.1    0.0091        81      93     108 ..     314     329 ..     286     330 .. 0.82

  Alignments for each domain:
  == domain 1  score: 57.1 bits;  conditional E-value: 2.7e-19
                 TSSSS-EEEE-SSSS--CGCCSEE-SS-EE-TTS-.-CCC--.....----..TTCC-TCCTTSCCCT......CTTTSB-SSBBT....TTSB.H... CS
     Pre-SET   4 gkekvpipvvnevdselppakfeYikknilsegve.dkeslarseesgCeC..kgdClsssskcaCaq......keeeeeflaYde....kgllke... 86 
                 +++ +p+++vn+ +s+++ ++fe+i++ni++egve  +e +    ++gCeC  + +C   +  c C++      k+e+ ++ aY+     kg+l+    
  KHJ30727.1  43 SNKMFPVSIVNKETSDTIDNNFEFIERNIIREGVElADEDF----QAGCECvtSYNC--MKGGCYCLEdvdtsgKKEDMRINAYHVvgrrKGCLRGeml 135
                 56689***********999****************855544....47****655569..569******9**99988888999***97777444433666 PP

                 CH-SEEE---TTSSS.-TT-TT- CS
     Pre-SET  87 eekkpiyECnekCkCssksCknR 109
                 +++ piyECn++C+C++ +C+n+
  KHJ30727.1 136 RSTMPIYECNKQCNCPE-DCPNK 157
                 99*************75.***97 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.0091
                 E---TTSSS.-TT-TT CS
     Pre-SET  93 yECnekCkCssksCkn 108
                  E   +C C sk+C+n
  KHJ30727.1 314 EEGMTRCLCGSKNCRN 329
                 566789********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       634  (0.0353617); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2242.77
//
Query:       KHJ30728.1  [L=506]
Description: putative sphingoid long chain base kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.3e-26   91.0   0.0    6.9e-26   90.3   0.0    1.3  1  DAGK_cat     Diacylglycerol kinase catalytic domain
  ------ inclusion threshold ------
      0.084   12.7   0.0       0.17   11.7   0.0    1.5  1  PRKCSH-like  Glucosidase II beta subunit-like


Domain annotation for each model (and alignments):
>> DAGK_cat  Diacylglycerol kinase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.3   0.0   7.7e-30   6.9e-26       2     126 .]     137     267 ..     136     267 .. 0.94

  Alignments for each domain:
  == domain 1  score: 90.3 bits;  conditional E-value: 7.7e-30
                 EEEEE-TTCTTTTHHHHH.HHCHHHHHHCTCEEEEEE--STTHHHHHHHHHHHCC-SEEEEEESHHHHHHHHHHHCT.....HHCTTSEEEEEE-SS-- CS
    DAGK_cat   2 llvivNpksGkgkgekll.rkvrelleeagvelelieteepgdakelakeakeegvdlivvaGGDGtvsevlnglle.....elatkpplgiiPlGtgN 94 
                 + +++Np sGk+++ k++ ++v++lle  ++++++++t+++g+a e++ke++ e +d++ +++GDG+ +e++ngl +     ++ +k++++ iP+G+gN
  KHJ30728.1 137 IKILINPFSGKRSAVKTFlKNVAPLLEASKCTYDVVHTKYRGHAIEILKEIDLEAYDVVACCSGDGLPHEAFNGLGKrtdavRALSKLAVAQIPCGSGN 235
                 5689********9999999**********************************************************9999888999************ PP

                 HHHHHCT--S.SHHHHHHCHHCTBEEEEEEEEE CS
    DAGK_cat  95 dlaralgigk.dieealesiikgetrkvdvgkv 126
                 +++ +l +g+ ++  a+ +iikg + ++d++++
  KHJ30728.1 236 AMSCNL-YGTdSPSLATLAIIKGISMSMDLVSI 267
                 ******.55549999**************9875 PP

>> PRKCSH-like  Glucosidase II beta subunit-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.9e-05      0.17      38     107 ..     358     424 ..     323     431 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.9e-05
  PRKCSH-like  38 wkclnsseiklsfdqvnddycdcPdGsdePGtsacengkfycaneGyis...gyiesfkvddgvcdydiccdG 107
                  +  l++s  +l+f  vnd     PdG d    +  + g+fyc n  y++   ++  +   +dg+ d  +c +G
   KHJ30728.1 358 FTSLDESLPQLQFGTVNDQ---LPDGWDLIPYN--KLGNFYCGNMAYMAsgaNFFSAALPNDGLMD-LVCING 424
                  667788888999*****97...59999986655..5689********9633368888999******.789887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 3753.30
//
Query:       KHJ30729.1  [L=291]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        2.1    8.4   4.2        3.9    7.5   4.2    1.4  1  DUF1451   Zinc-ribbon containing domain


Domain annotation for each model (and alignments):
>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   4.2   0.00022       3.9     117     144 ..     188     215 ..     185     217 .. 0.93

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00022
     DUF1451 117 CekCgkelalkkteeippCpkCgateFr 144
                 C++C+ + ++++ ++ p C +Cg+t+ +
  KHJ30729.1 188 CKRCNVHYSIEHCSRPPSCGNCGSTNHT 215
                 ************************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2175.11
//
Query:       KHJ30730.1  [L=228]
Description: putative peptide methionine sulfoxide [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-57  193.6   2.0    2.6e-57  193.3   2.0    1.1  1  PMSR      Peptide methionine sulfoxide reductase


Domain annotation for each model (and alignments):
>> PMSR  Peptide methionine sulfoxide reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.3   2.0   1.4e-61   2.6e-57       1     152 [.      60     214 ..      60     215 .. 0.97

  Alignments for each domain:
  == domain 1  score: 193.3 bits;  conditional E-value: 1.4e-61
                 EEEEE-S-HHHHHHHHCTST...TEEEEEEEEESSS-SS--HHHHHTTTT--EEEEEEEEETTTS-HHHHHHHHHHTS-TT-SSEETTEESGGG--EEE CS
        PMSR   1 eavlagGCFWgveklfeklk...GvlstevGYagGktenptYeevcsgktghaEavevvydpekvsleellelffeihDptqlnrqgnDvGtqYrsaiy 96 
                 +a++a+GCFW+vek+f++     G+++ +vGY+gG+t+nptY +vc+g+tg+aEa+ + +dp+ +++ +l+elf+ ih+pt++n+qg D+GtqYrsai+
  KHJ30730.1  60 KAIFAAGCFWSVEKYFRDEFtdkGLYDIRVGYIGGHTSNPTYATVCTGRTGFAEAILISFDPNILKYVQLVELFYAIHNPTKKNEQGFDIGTQYRSAIF 158
                 589*************9876677**************************************************************************** PP

                 ESSCCHHHHHHHHHHHHHTTHTTSSS---EEEEG-SEEE--CCCTTHHHH-TTS.-- CS
        PMSR  97 ytneeqkevaeevleelqkkkalkkkivteieplkefykaeeyHqqYleknpeg.yc 152
                 y ++eq+e+a++v+e+++++ +++++ivtei p++e+++ae+yHqqY+ knp++ y+
  KHJ30730.1 159 YYDKEQEETARDVTERANRQ-WWSDEIVTEILPAGEWWDAEDYHQQYFVKNPDTkYQ 214
                 *******************9.*******************************98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       502  (0.0279993); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1754.52
//
Query:       KHJ30731.1  [L=763]
Description: putative amino acid [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.3e-81  271.8  34.3      1e-80  271.5  34.3    1.1  1  Aa_trans     Transmembrane amino acid transporter protein
  ------ inclusion threshold ------
        2.1    9.0   6.9       0.45   11.1   3.5    1.6  2  SPT6_acidic  Acidic N-terminal SPT6


Domain annotation for each model (and alignments):
>> Aa_trans  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  271.5  34.3   1.1e-84     1e-80       3     408 ..     379     761 ..     377     762 .. 0.93

  Alignments for each domain:
  == domain 1  score: 271.5 bits;  conditional E-value: 1.1e-84
    Aa_trans   3 ssalsavlnlikaivGaGvLaLPyAfkqlGlivGlillllvallslytlllLvkcsktlasgkrnksYgdlgyrllGpkgkliidlailvqlfGvgvsy 101
                  s + a+l l+k++vG+GvL+LP A  ++G++++ i+ll+va+ls+y+++lL++++ +       +s+gd+g  l+G++ ++ i ++i+  ++G++ +y
  KHJ30731.1 379 NSSVGATLLLLKSFVGTGVLFLPRAYLNGGMLFSNIVLLFVAALSYYCFVLLIRTRLK-----VERSFGDIGGILYGSWFRYTILASIVAGQIGFVAAY 472
                 5667799*************************************************95.....569********************************* PP

    Aa_trans 102 liligdllpaifesffdt.lllsnvyfilisaliiipLslipnlskLsylSllalvsslyyivilvlvvaelvklelkgvseetvkkasklkglflaig 199
                 +++i+++l+a++  +++  + ++n  +il+++++++p+sl++++skL++++l+a+ ++l++i++l+++ ++   l +++  ++ v  +++ k+++l+ig
  KHJ30731.1 473 IVFISQNLQAFILAVTSGkTYIDNIWLILMQTAVFLPFSLLRDISKLGFTALIADAFILFGILVLYYFDIDT--LIHQNGPSDIV--NFNPKDWTLFIG 567
                 *************999887889*************************************9866655555555..55566666655..78889******* PP

    Aa_trans 200 iivFAftghavlleiqnelkdpskfkkmtkvlllsiilatvlyilvGlvGYltFGnevkgnillnlpkssilivivnlllvlhlilsfplqlhplrqvv 298
                 ++vF+f+g+ ++++iq+++++p+kf+    vl +++i++++l+++vG++ Y+++G+++++ i+lnlp+ s l + v+ll+ ++++ls+plql+p++++ 
  KHJ30731.1 568 TAVFTFEGIGLIIPIQESMRNPKKFP---AVLGVVMIIIIILFLSVGVFSYAAYGSKTETIIILNLPQDSKLVNGVQLLYSIAILLSTPLQLFPAIRIT 663
                 **************************...7********************************************************************* PP

    Aa_trans 299 enllikkeavagasekeapkskllrlvirlllvvityliA.lsvpslakvlslvGatsstplsfilPalfhlkliktekksleklvkkkildlicivlg 396
                 en ++++      s+  ++ +k+ ++v+r+++v++   +A + + +l+k++++vG+++++pl++i+P+++hlk   ++   l       ++d++  ++g
  KHJ30731.1 664 ENEIFTR------SGRYNQYIKWKKNVFRFFMVMFCAGLAwVGAANLDKFIAIVGSVACVPLVYIYPPMLHLKGAAKTP--L-----DIFIDIFLCIFG 749
                 *****98......**********************************************************99776653..2.....334589999999 PP

    Aa_trans 397 lllvfyglavli 408
                  l+++y++  +i
  KHJ30731.1 750 SLVMVYTTFLTI 761
                 999999988776 PP

>> SPT6_acidic  Acidic N-terminal SPT6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.1         2   1.8e+04      53      62 ..     204     213 ..     184     222 .. 0.66
   2 ?   11.1   3.5     5e-05      0.45       5      47 ..     322     374 ..     320     382 .. 0.52

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 2
  SPT6_acidic  53 eedaLdedDl 62 
                  +++++d+d++
   KHJ30731.1 204 SANRIDDDEF 213
                  3356677765 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 5e-05
  SPT6_acidic   5 EedddeeeerkvregFI......vddd...eeeeeeeesee...eeekkrrkkkk 47 
                  Ee d+e+e++   + FI       d +   e+ee +e   +   ++++++rk++k
   KHJ30731.1 322 EELDEEDEIQTSSKKFIsqryfiRDSEngeEDEEPTET--NtllTSSHRKRKERK 374
                  44466666777777777555554554434233333333..145555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (763 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       831  (0.0463495); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.40
# Mc/sec: 5718.76
//
Query:       KHJ30732.1  [L=317]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
        2.3    8.0  12.5       0.65    9.8   0.6    3.3  3  zinc_ribbon_2  zinc-ribbon domain


Domain annotation for each model (and alignments):
>> zinc_ribbon_2  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   1.0     0.044   7.8e+02      15      20 ..     186     192 ..     185     194 .. 0.59
   2 ?    4.5   0.2    0.0017        30      13      21 ..     202     210 ..     200     214 .. 0.71
   3 ?    9.8   0.6   3.6e-05      0.65       1      16 [.     223     238 ..     223     239 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.044
  zinc_ribbon_2  15 FCpyC.G 20 
                    FC +C G
     KHJ30732.1 186 FCKRCnG 192
                    6666655 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0017
  zinc_ribbon_2  13 akFCpyCGt 21 
                    a+ C +CG+
     KHJ30732.1 202 APSCANCGS 210
                    666777775 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 3.6e-05
  zinc_ribbon_2   1 fCpnCGaelqdnakFC 16 
                    +C nCG+++  +++ C
     KHJ30732.1 223 KCRNCGRPHRADSRRC 238
                    8********9999888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       823  (0.0459033); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2330.60
//
Query:       KHJ30733.1  [L=203]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1510.67
//
Query:       KHJ30734.1  [L=364]
Description: putative anaphase promoting complex subunit protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      0.002   18.2   0.4        1.2    9.1   0.1    2.3  2  Atg31     Autophagy-related protein 31


Domain annotation for each model (and alignments):
>> Atg31  Autophagy-related protein 31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0   0.00025       4.5      32      76 ..     126     170 ..      79     184 .. 0.72
   2 !    9.1   0.1   6.8e-05       1.2      61     104 ..     210     261 ..     191     287 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00025
       Atg31  32 tkamfPtnikYiFeddddeeeveeldssdkkeedeienviivdld 76 
                 ++  +P +++Y+F ddd++e  ++   ++  ee + +  +i  +d
  KHJ30734.1 126 ETIAHPRQVHYLFSDDDTSEVLTSTILQSLFEEASSNTSLINSVD 170
                 45569************9886655544443344443334444455 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 6.8e-05
       Atg31  61 kkeedeienviivdldesgs.ledvelisdqyelLsykke........geees 104
                 +++++ i  viivdl+++g  + +v+ +s ++++L+ + e        ++ ++
  KHJ30734.1 210 NDSKSGI-RVIIVDLNSNGDgVASVNSLSSKWQVLNAQIEkaptwngtDDAKT 261
                 4555555.59******998559*************998875665444322222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (364 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2602.96
//
Query:       KHJ30735.1  [L=403]
Description: putative amine oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.5e-42  143.8   0.0    1.1e-41  143.6   0.0    1.1  1  Amino_oxidase  Flavin containing amine oxidoreductase


Domain annotation for each model (and alignments):
>> Amino_oxidase  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.6   0.0   6.4e-46   1.1e-41     126     452 .]      55     383 ..      19     383 .. 0.82

  Alignments for each domain:
  == domain 1  score: 143.6 bits;  conditional E-value: 6.4e-46
                    HHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHTSTTTTCBHHHHTCCCCHHHHHTSCCCEETTHTHHHHHHHHH..T CS
  Amino_oxidase 126 qktldeldldskslaesleelgrrepgdvevwdrliepelfaklefasglfagdpselsaklalpllwelegfggslllprgGlsqlpealae..e 219
                    +  l+  d  + + +e +ee+ +++p   ++ +r   p++ +++e++ g+     s ++a+    + + +++++++l+l +gG++++++  a+   
     KHJ30735.1  55 WYYLENPDAPDRTVKEFVEEFVQNHPLL-TISERKWAPQATREIELWIGT-----SIEQAS---SKYLSYFMTERNLYL-KGGYDRIVNWTAQplL 140
                    5556666777788899999********9.*********9********999.....444444...456788999999887.9************866 PP

                    TTTEEEETSEEEEEEEEETTCEEEEETTSTEEEESEEEE-S-HHHHH..SSEEESCCSHHHHHHHHHSEEEEEEEEEEEESSGGSGCSTS....EC CS
  Amino_oxidase 220 lrgldirlntrVkeikregdgvtvtledgevveaDaVvvTvplgvlk..ailfsPplpdekaeairnlgfgsvnkvilefdrkfwednal....gq 309
                    +  + i++++ Vkeik+++ +v+v +++ +++++DaV+vTvplg+l+  +ilf+Pplp+  ++ i  + +g + k+++ef+  fw+++++    + 
     KHJ30735.1 141 QDLDLIQMGQIVKEIKWGSPKVSV-ISQNSTFTGDAVIVTVPLGCLRqnHILFTPPLPKSIQAGINAFSYGALGKIFVEFESVFWPEENDqfifY- 234
                    66668*******************.7888899*******************************************************88533332. PP

                    E......CECCCEEETTTEEEEECCECCCSTTTEEE.......EEEEEECHHHHHHHTTS-HHHHHHHHHHHHHHHHT...GTSSTCSEEEEEECC CS
  Amino_oxidase 310 g......vlvseltttlgeafissdfpsrappgkgl.......vllvyvggdaaneleslsdeelvqavlrdLrklfg...eevpepkatlvtrWh 389
                            +++ ++ ++  +++s+           l       +l+v +++   +++e l+  e+ +++   ++ l     ++ p+ +++ vt+W+
     KHJ30735.1 235 PtppsctSPFDPDSILSYATVTSN-----------LwimsgikALCVQISEPLTQRVELLPCAEVCAYLEPLFKLLRTdpnNDLPKYVNADVTHWT 319
                    032445544444444444444444...........444444448******999999877777777776666665554486666666667******* PP

                    TETTT.SSSEEE.BTTHHHHHHHHHHCHHCSTTEEE.SGGGCTTTTTSHHHHHHHHHHHHHHHH CS
  Amino_oxidase 390 tdpla.rgsysyvsvgpghedydplakpegdprlffAGehtsreypgtvegAilSGlraAaril 452
                    tdpla  gsys  +vg +++ +    ++++  rl fAGeh++   +g+v+gA+++G  aA+ il
     KHJ30735.1 320 TDPLAgFGSYSIEKVGDESKLLLEALREHKSERLQFAGEHCIEIGNGCVHGAFETGEIAARNIL 383
                    *****************999999999999********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2843.70
//
Query:       KHJ30736.1  [L=144]
Description: hypothetical protein EV44_g3716 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1115.61
//
Query:       KHJ30737.1  [L=629]
Description: putative transcription factor spt8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.7e-14   52.6   0.1      0.055   14.3   0.0    7.7  8  WD40         WD domain, G-beta repeat
     0.0064   16.8   0.0         20    5.5   0.0    4.0  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.049   4.4e+02      12      38 .]     122     148 ..     114     148 .. 0.74
   2 !    5.9   0.0    0.0029        26      11      37 ..     198     224 ..     187     225 .. 0.88
   3 ?    3.0   0.0     0.025   2.2e+02      10      34 ..     240     265 ..     232     268 .. 0.81
   4 ?    0.4   0.0      0.16   1.4e+03       2      27 ..     274     300 ..     273     316 .. 0.85
   5 !   14.3   0.0   6.2e-06     0.055      18      38 .]     454     473 ..     424     473 .. 0.73
   6 !    9.6   0.0    0.0002       1.8      16      34 ..     494     514 ..     484     515 .. 0.83
   7 !    5.3   0.0    0.0046        41      11      38 .]     537     563 ..     525     563 .. 0.80
   8 ?   -2.6   0.0       1.4   1.2e+04      13      27 ..     589     603 ..     582     612 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.049
                 SEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvriWd 38 
                 s++++   pd ++ +sG+ D+ +r +d
  KHJ30737.1 122 SINAITATPDMRYWFSGGTDCYIRKYD 148
                 5777776677777678999****9665 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0029
                 SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriW 37 
                 s+v+sla++++  wl+sG + g++ ++
  KHJ30737.1 198 SPVYSLAVHSEALWLLSGLESGSINLY 224
                 469***************889999887 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.025
                 S.SSEEEEEEETTSSEEEEEETTSEE CS
        WD40  10 H.ssvtslafspdgawlasGsdDgtv 34 
                 H s v+ l+  +d + ++sGs+D+ +
  KHJ30737.1 240 HkSAVSVLKLAKDEKSVLSGSWDKEI 265
                 755577777889999999*****976 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.16
                 EEEEEEESS.SSEEEEEEETTSSEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlas 27 
                 q  r+++G  + ++++ + pd++  +s
  KHJ30737.1 274 QVKRSFEGSgGQISAIEVRPDSNVAIS 300
                 678999999666*********998765 PP

  == domain 5  score: 14.3 bits;  conditional E-value: 6.2e-06
                 EETTSSEEEEEETTSEEEEEE CS
        WD40  18 fspdgawlasGsdDgtvriWd 38 
                   +d+++la +s Dgt+riWd
  KHJ30737.1 454 ITSDSTFLA-ASIDGTIRIWD 473
                 567899986.8*********9 PP

  == domain 6  score: 9.6 bits;  conditional E-value: 0.0002
                 EE..EETTSSEEEEEETTSEE CS
        WD40  16 la..fspdgawlasGsdDgtv 34 
                 ++  +spdg++l +G +++tv
  KHJ30737.1 494 MSacWSPDGNFLYAGRRNCTV 514
                 4444***********999998 PP

  == domain 7  score: 5.3 bits;  conditional E-value: 0.0046
                 SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriWd 38 
                 + v++l+  p+g+ l+++s +  +r++d
  KHJ30737.1 537 GAVSALRAMPNGRHLLCAS-NDILRLYD 563
                 339999999*******99*.******98 PP

  == domain 8  score: -2.6 bits;  conditional E-value: 1.4
                 EEEEEEETTSSEEEE CS
        WD40  13 vtslafspdgawlas 27 
                 + +l f+p  ++++s
  KHJ30737.1 589 IAALHFDPTYKYMIS 603
                 467889999999764 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.019   1.7e+02      39      88 ..     198     248 ..     187     252 .. 0.75
   2 ?    3.1   0.1     0.014   1.2e+02      25      81 ..     230     284 ..     213     292 .. 0.79
   3 ?   -2.3   0.0      0.66   5.9e+03      53      71 ..     460     478 ..     454     486 .. 0.71
   4 !    5.5   0.0    0.0023        20      44      70 ..     496     522 ..     492     529 .. 0.88
   5 ?    1.7   0.0     0.037   3.3e+02      37      76 ..     535     573 ..     524     577 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.019
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldae..sgkvvhslsvksekavtclg 88 
                  s v sLa + +   L  + + g+++l+++   +gk +  ++ +++ av+ l+
   KHJ30737.1 198 SPVYSLAVHSEALWLLSGLESGSINLYSVRhdEGKRIAYMNQHKS-AVSVLK 248
                  67888999999999**************97224666666666655.476665 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.014
  ANAPC4_WD40  25 ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  +g+r+  +  ++++s v+ L+  +d+k    +  d e+   d ++g+v +s++ +  
   KHJ30737.1 230 EGKRIAYM--NQHKSAVSVLKLAKDEKSVLSGSWDKEILDWDLNTGQVKRSFEGSGG 284
                  56888888..789999999999**************999999999999988876555 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.66
  ANAPC4_WD40  53 Lavaysdgevrlldaesgk 71 
                  +  a  dg++r+ d  + +
   KHJ30737.1 460 FLAASIDGTIRIWDRRQPH 478
                  4456789****99977655 PP

  == domain 4  score: 5.5 bits;  conditional E-value: 0.0023
  ANAPC4_WD40  44 LaWkpdgklLavaysdgevrlldaesg 70 
                   +W+pdg++L  +  + +v+ +++++g
   KHJ30737.1 496 ACWSPDGNFLYAGRRNCTVEEFSIHHG 522
                  58****************998888766 PP

  == domain 5  score: 1.7 bits;  conditional E-value: 0.037
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                   ++ v++L+  p+g+ L  a s+  +rl+d ++ + v+ +
   KHJ30737.1 535 GSGAVSALRAMPNGRHLLCA-SNDILRLYDLKESQNVKRS 573
                  56789999999****99887.5669999999998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (629 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.24s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4349.00
//
Query:       KHJ30738.1  [L=480]
Description: putative dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kda subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.3e-158  528.2   0.0   1.5e-158  528.0   0.0    1.0  1  DDOST_48kD  Oligosaccharyltransferase 48 kDa subunit beta


Domain annotation for each model (and alignments):
>> DDOST_48kD  Oligosaccharyltransferase 48 kDa subunit beta
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  528.0   0.0  8.3e-163  1.5e-158       1     414 [.      34     473 ..      34     474 .. 0.97

  Alignments for each domain:
  == domain 1  score: 528.0 bits;  conditional E-value: 8.3e-163
  DDOST_48kD   1 vLvvldseaekeeyskflksLeergfeltfksakdeslsLfkygerkYdhlillapkvkelgksltpkallefvnkggniLvalsssk.lpesirslls 98 
                 +L++l+++ e ++ysk++ +L++r+f++t++s+k+ +l+Lf+ ger Ydhl++++ k+k+lg+++t + ll+f+nkggniL++l+ssk +p+++ sll 
  KHJ30738.1  34 LLILLEESIEDTRYSKYIADLKDRDFQVTIESPKNGKLTLFELGERVYDHLVIFPCKTKGLGPNFTSQLLLNFLNKGGNILLTLTSSKsTPTALISLLL 132
                 699**********************************************************************************9999********** PP

  DDOST_48kD  99 elgiels.ergskvvDhfnydsesdaekhdvlllsspeellakvknifsekkkeeevlf..rgvgallgn.nplllpiLrapstsysydpkeeeesaee 193
                 el+i+l+ +r+s vvDhfnyd  s++ekhdv+ll++p++++++vkn+f+ ++k++ev++  rgvg++lgn +pll+piLrap+t+ys++++++++ aee
  KHJ30738.1 133 ELDIHLPtDRSSFVVDHFNYDILSANEKHDVVLLPRPDAIRPDVKNYFRGDGKGGEVIAfpRGVGQTLGNnSPLLTPILRAPRTAYSFSSNDKNAIAEE 231
                 *******9*****************************************88889998888**********99*************************** PP

  DDOST_48kD 194 afavGsqlslvaalQarnnaRvvfvGslellsdeffdakvk............kkeksgnrefakdltkWtfqekgvlrvksvehhkee....eeeenp 276
                 +favG qlsl++++Qarn+aR++++Gs+e+l+d+++da+vk            k++k++n+++ k++t Wtf+e g l+v++++h+ +e       +np
  KHJ30738.1 232 PFAVGPQLSLISTIQARNSARLTVIGSAEMLEDTWLDATVKrsvavngadkeaKEVKTSNQALLKEVTGWTFKEIGSLKVNEIKHYLQEndiqIGPTNP 330
                 *****************************************************9********************************55558985679** PP

  DDOST_48kD 277 eiYrikdevtYsielseysndkwvPfea...ddlqLefvmLdPyirltLkpkkssedatvYstkfklPDrhGvFkFkvdYkRpgltyieekttvsvrhl 372
                 +iYr+k+ v+Ysie+seys+dk+vP++    d +qLef+mL+P++r++L+ ++ss++++vYs++f+lPD+hG+F+F+v+YkRp+lt+ieekttv+vrh+
  KHJ30738.1 331 KIYRVKNFVKYSIEISEYSWDKYVPYTPpkgDVIQLEFSMLSPFYRVPLQLTSSSHNSSVYSASFRLPDQHGIFNFMVNYKRPFLTNIEEKTTVTVRHF 429
                 **************************9988888******************99999******************************************* PP

  DDOST_48kD 373 ahdeypR..fissAwpYyasafsvvvgfllFvalflyskeekkk 414
                 ahde+pR   is+Awp++a+++++v+g+++F+al+l+sk++kk+
  KHJ30738.1 430 AHDEWPRswAISGAWPWIAGVWVTVAGWIVFIALWLWSKPVKKS 473
                 ****************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (480 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       595  (0.0331865); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3531.28
//
Query:       KHJ30739.1  [L=137]
Description: hypothetical protein EV44_g5315 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.013   14.4   0.0      0.018   14.0   0.0    1.1  1  Paramyxo_ncap  Paramyxovirus nucleocapsid protein


Domain annotation for each model (and alignments):
>> Paramyxo_ncap  Paramyxovirus nucleocapsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0     1e-06     0.018     110     160 ..      67     117 ..      60     125 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1e-06
  Paramyxo_ncap 110 sqsgltfasrgaslddeadeyfsiedeesgderqlgwfenkeivdievqda 160
                     +  l +a +g ++++++d+yf  +++   ++++    +n++++d+e+ d 
     KHJ30739.1  67 KKILLCLAPKGQNVNKDSDKYFDDKNDGTISRSKGDSHNNQHVQDLEIFDN 117
                    5566899****************************************9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 997.65
//
Query:       KHJ30740.1  [L=220]
Description: hypothetical protein EV44_g6532 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1731.61
//
Query:       KHJ30741.1  [L=590]
Description: putative 6-phosphofructo-2-kinase fructose-bisphosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-60  202.9   0.2      6e-60  202.3   0.2    1.3  1  6PF2K       6-phosphofructo-2-kinase
    9.5e-17   61.3   0.0    3.4e-16   59.5   0.0    1.9  1  His_Phos_1  Histidine phosphatase superfamily (branch 1)
  ------ inclusion threshold ------
      0.038   13.4   0.0        0.2   11.1   0.0    2.1  2  KTI12       Chromatin associated protein KTI12
       0.04   13.3   0.0      0.083   12.3   0.0    1.5  1  ZnuA        Zinc-uptake complex component A periplasmic
       0.11   12.3   0.0        8.7    6.2   0.0    2.2  2  APS_kinase  Adenylylsulphate kinase
       0.12   12.6   0.0       0.28   11.3   0.0    1.6  1  AAA_33      AAA domain


Domain annotation for each model (and alignments):
>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.3   0.2     2e-63     6e-60       4     222 ..     112     331 ..     109     332 .. 0.94

  Alignments for each domain:
  == domain 1  score: 202.3 bits;  conditional E-value: 2e-63
                 XHHHHT..S-EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHHHHHHSS...---GGGGSTT-HHHHHHHHHHHHHHHHHHHHHHHTS--SE CS
       6PF2K   4 stvtnlknsklvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgkyrreaska...lsdaeffrpdneealklreklalaalkdllaylneeegqv 99 
                 +++  +++ +++ivlvGLpargKt is+ l ryl+wlgv+t++F++++yrr +  +   l d  ff    ++++ lr+k+ ++  +dl a+ln+e+gqv
  KHJ30741.1 112 ESGRLFHSGRIAIVLVGLPARGKTHISVSLARYLQWLGVKTRIFHLADYRRATMGEkkdLPDDYFFINACAKSVYLRQKILQKCREDLYAWLNDENGQV 210
                 566778999*******************************************99995554445677888999*************************** PP

                 EEEES---SHHHHHHHHHHHHHTT-EEEEEEEE--HHHHHHHHHHHHTTTSGGGTTS-HHHHHHHHHHHHHHHHTT-----TTTTTTSEEEEEETTTTE CS
       6PF2K 100 aifDAtNttrerRklilefveennlkvlflesicsdeeiikeNikevklsspDYkdketeeaikdflkRlenyekqyeplddeedeelsyIkvidvgks 198
                 ai+DA+N   + R+ + e++ ++n+++lfles ++d++i++eN ++vk++spD+++ + +ea + +l+R+++    +e +    +++l+yIk+i++g+s
  KHJ30741.1 211 AIYDAVNPHANGRRSLAEEFAQRNVQTLFLESYVTDQRILAENARNVKIHSPDFHGMDADEAAQLYLRRINMKIPLFETMM---ENDLNYIKMINAGES 306
                 *******************************************************************************99...889************ PP

                 EEEE---.SHHHHHHHHHHTT---S CS
       6PF2K 199 lvvnnvq.gylqsrivyyllNihlk 222
                 ++ nnv+ gyl  riv+yl+N+h k
  KHJ30741.1 307 IQYNNVSfGYLSLRIVFYLMNLHIK 331
                 ******879*************976 PP

>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.5   0.0   1.2e-19   3.4e-16      17     173 ..     363     518 ..     335     535 .. 0.78

  Alignments for each domain:
  == domain 1  score: 59.5 bits;  conditional E-value: 1.2e-19
                 ..TT----B-HHHHHHHHHHHHHHTTS---EE..........EE-SSHHHHHHHHHHHHCTT--EEE-GGGS----GGGTT-B.HHHHHH..HSHHHHH CS
  His_Phos_1  17 lqgrtdvpLteeGreqAealaerlagepidai..........ysSplkRarqTaeliaealglpveldegLrEidfGdweglttaeiaeeypeeleawl 105
                  q+ t++ L  +  e A a+ae                    ++S+ k   +Ta +++e  g +v+++ ++  ++ G++ +l+ a+i+e+ypee  ++ 
  KHJ30741.1 363 SQKMTNALLKHREAEKATAIAEG--------EssatlrsltiWASTRKLSFETAIPLKE-KGFTVRQRSQMSQLNPGVCGKLNEASIRERYPEEVIKHA 452
                 34444555555555555555554........04444444466************99987.8************************************** PP

                 HHHH-GGG-BS-BHHHHHHHHHHHHHHHHHHTTTSEEEEEE-HHHHHHHHHHHHT--GGGGGGB---T CS
  His_Phos_1 106 rdpadvrppggEsledvaaRvaaaleelaarhegetvlvVsHggvirallarllglpleelrrleldn 173
                 +dp+++r+p+ Es++d+a R+++++ el++++++  +l+++H  v+r+l+ +l+ ++ ++++ +e++ 
  KHJ30741.1 453 ADPYHHRYPRAESYHDLAVRLEPVILELEREEND--ILIIAHESVLRVLYGYLMACDATFIPSIEFPR 518
                 ******************************9987..***********************999998844 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.27   8.2e+02     209     259 ..      25      73 ..       3      82 .. 0.78
   2 ?   11.1   0.0   6.6e-05       0.2       4      41 ..     124     161 ..     123     278 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.27
                 ....HTT--HHH................HHHHHHHHHHHHHHHT.TSSS-- CS
       KTI12 209 aqksavaidkltlpgsseslelpakkltlaeLsrlrrqFvklnkaklenvd 259
                 ++ ++   d+++ p +  + el+++ ++   L+r+  +F++ n   +++ d
  KHJ30741.1  25 HCLKTPGNDMVETPTRFSRPELAETYINALDLNRHSSEFLSDND--PNDAD 73 
                 56666777889999999999999999**************9998..44444 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 6.6e-05
                 EEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH CS
       KTI12   4 vvltGlPssGKstrakeLakaleeekrsvvviddeslg 41 
                 +vl GlP+ GK+ ++  La++l+  + +  +   + ++
  KHJ30741.1 124 IVLVGLPARGKTHISVSLARYLQWLGVKTRIFHLADYR 161
                 89*********************977777776665555 PP

>> ZnuA  Zinc-uptake complex component A periplasmic
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.8e-05     0.083     175     247 ..     210     281 ..     190     301 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.8e-05
                 EEEE.SSSSSHHHHHHHHHHHHHTT-SEEEEET.TS-THHHHHHHHHHT-EEEEE-STSSSTSTTSTTSHHHHHH CS
                 xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ZnuA 175 agia.gisteaaqiaalieeikeagvkaifvep.laspklaetlaeeagvkvatlysldslgdegsaetYidmmr 247
                 ++i  ++++ a+  ++l+ee  +++v+++f+e+ +++++++++ a++ ++    ++++d+ +++   + Y+  ++
  KHJ30741.1 210 VAIYdAVNPHANGRRSLAEEFAQRNVQTLFLESyVTDQRILAENARNVKIHSPDFHGMDADEAA---QLYLRRIN 281
                 33444666669999*******************7778888888888777776667777774444...46655444 PP

>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0029       8.7       4      35 ..     123     154 ..     121     172 .. 0.87
   2 ?    3.7   0.0     0.018        53      71     131 ..     205     259 ..     192     273 .. 0.68

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0029
                 EEEEESSTTSSHHHHHHHHHHHHHHTT--EEE CS
  APS_kinase   4 vvwltGlsgsGKstianalekkLvekgisvyl 35 
                  + l Gl + GK+ i++ l+++L+  g+++ +
  KHJ30741.1 123 AIVLVGLPARGKTHISVSLARYLQWLGVKTRI 154
                 68899*******************99988765 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.018
                 HHTT-EEEEE----SHHHHHHHHHHHHCHTEEEEEEEE--HHHHHHHTTTSHHHHHHTTSS CS
  APS_kinase  71 adaglivlvafisPyreeReaarelleealkfievfvdtplevceerDpkglYkkareGei 131
                  ++g++++  ++ P+++ R++  e +++        v+t + ++  +D++ l ++ar+ +i
  KHJ30741.1 205 DENGQVAIYDAVNPHANGRRSLAEEFAQ------RNVQTLFLESYVTDQRILAENARNVKI 259
                 57899***********999776555554......344444444445566666666666555 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   9.3e-05      0.28       2      47 ..     124     187 ..     124     259 .. 0.56

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 9.3e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdt.....lrrrlfgtdqqskt.............d 47 
                 ++lvGlp+ GK++ + +l++ l++  + + +     +rr+  g++++ +               
  KHJ30741.1 124 IVLVGLPARGKTHISVSLARYLQWLGVKTRIfhladYRRATMGEKKDLPDdyffinacaksvyL 187
                 689****************999977777776555555554444444433333433333333331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (590 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.39
# Mc/sec: 4492.79
//
Query:       KHJ30742.1  [L=244]
Description: putative head of nucleotide exchange factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-45  153.3   4.9    5.6e-45  153.0   4.9    1.1  1  GrpE      GrpE
  ------ inclusion threshold ------
      0.072   13.0   0.1        0.1   12.5   0.1    1.4  1  IL2       Interleukin 2


Domain annotation for each model (and alignments):
>> GrpE  GrpE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.0   4.9   6.2e-49   5.6e-45       5     166 .]      68     242 ..      56     242 .. 0.91

  Alignments for each domain:
  == domain 1  score: 153.0 bits;  conditional E-value: 6.2e-49
                 ..CTTTHHHHCCCCCCTTCHHHCTTSCCCCCCTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC......HHH-HH.......... CS
        GrpE   5 eeeeeeedeeeeleeeleelekevkelkekllrllaefenlrkrtekekeeakkfaiekfakdLLpvlDnleralksak....eneeek.......... 89 
                 + +e++ +ee+   ++le+ ++e+ +lk+k+lr+ a+f nl++rt+++ ++a++fai++fakdL++ +Dnl+ral+ ++    +    +          
  KHJ30742.1  68 KCSEAQSTEEDPVTKDLEAKKREIIDLKDKYLRSIADFRNLQERTKRDMQAARDFAIQRFAKDLIESVDNLDRALSMVPqdqlS----Npeasedrkhl 162
                 4466777777778888************************************************************99955441....344567899** PP

                 .HHHHHHHHHHHHHHHHHHHTT-EE---T..TSB--TTTEEEEEEECSSC...TBEEEEEE--EEETTEEEE-EEEEEEE CS
        GrpE  90 .slleGvemtlkqllkiLekhgvekiepk..gepFDpnlheavstveddekeegtvvevvqkGYklkdrvlRpAmVkVsk 166
                  sl+eG++mt++ l+++L+k+g+e+++p   g +FDpn hea ++v+ + ke++tv++  qkG+kl++r+lR+A+V+V+k
  KHJ30742.1 163 iSLYEGLKMTEEVLMSTLKKNGLERFDPSieGVKFDPNEHEATFMVPMQGKEDNTVFNTQQKGFKLHGRILRAAKVGVVK 242
                 ***************************9889***********************************************87 PP

>> IL2  Interleukin 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   1.2e-05       0.1      36      91 ..     129     183 ..      88     207 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.2e-05
                 HHHHHHHHHBTT--HHHHTCEEEE-BSS--SGGGHHHHHHTHHHHHHHHHHHHHHS CS
         IL2  36 qlllekvknyknlklsrmltfklylPkkatelkhlqcleeelkpleevlnlaqskn 91 
                 + l+e v+n  ++ ls++ + +l  P+ + + khl  l e lk  eevl  + +kn
  KHJ30742.1 129 KDLIESVDNL-DRALSMVPQDQLSNPEASEDRKHLISLYEGLKMTEEVLMSTLKKN 183
                 5577888865.578***********************************7666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1092  (0.0609069); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 2028.63
//
Query:       KHJ30743.1  [L=484]
Description: putative phenylalanine-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-48  165.1   0.0    1.6e-27   96.5   0.0    2.3  2  tRNA-synt_2d  tRNA synthetases class II core domain (F)
    5.9e-21   74.7   0.1    2.2e-20   72.9   0.0    2.1  2  FDX-ACB       Ferredoxin-fold anticodon binding domain


Domain annotation for each model (and alignments):
>> tRNA-synt_2d  tRNA synthetases class II core domain (F)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.2   0.0   3.3e-22   2.9e-18      16     129 ..      85     191 ..      76     197 .. 0.92
   2 !   96.5   0.0   1.8e-31   1.6e-27     145     245 .]     269     365 ..     236     365 .. 0.91

  Alignments for each domain:
  == domain 1  score: 66.2 bits;  conditional E-value: 3.3e-22
                   -SHHHHHHHHHHHHHHCTTCEESS.TTSEEEHHHHTSTTTSTTTSHHHCHTTSEBTCTSSS-ECESEEE-SSTHHHHHHHHTTS-SSEEEEEEEEEE CS
  tRNA-synt_2d  16 lhpltkvleeikeiflelgfeeve.gpevesefynfdaLnvpqdhpaRdmqdtFylkkpekaveekllLRthttavqirtlekkkppikiisigrvf 111
                    hp++ ++  i+++f +  f+  +  p v s + nfd L +p dhp R+ +dt+y+       +++++LRth +a q+   ++++   +++s + v+
    KHJ30743.1  85 DHPISLTRAVIESCFPSPSFKYYNnIPPVVSTYQNFDSLGFPPDHPGRSRSDTYYV-------NNSTVLRTHSSAHQADLFRANSSRGYLVSAD-VY 173
                   699*******************99779999**************************.......6789************999998888877776.** PP

                   BSST-SSSB-SEEEEEEE CS
  tRNA-synt_2d 112 RrdavDathlaeFhqveg 129
                   Rrda+D+ h + Fhq+eg
    KHJ30743.1 174 RRDAIDKNHYPIFHQMEG 191
                   *****************8 PP

  == domain 2  score: 96.5 bits;  conditional E-value: 1.8e-31
                   HHHHHHHHCTSTEEEEEEECEETTEEEEEEEEEEECCSSSSEEEEEEEEEE-HHHHHHTT-.TTSEEEEEEEEHHHHHHHHHT-SSGHHHHTT.HHH CS
  tRNA-synt_2d 145 leellkklfgaevkvrfrpsyfpftePsaevdvylvekkkkwlEllgaGmvrpevleavgideevsgfafGlGveRlamlkygieDiRelvendlrf 241
                     +l ++  ++++++r+ ++yfpft Ps e++vy+   +++wlE+lg+G+v++++l+++ +  ++ g afG+G+eR+aml +gi+DiR ++++d rf
    KHJ30743.1 269 TVSLNHEYHEKQLELRWVEAYFPFTSPSWELEVYW---QDEWLEVLGCGIVKQSILNEAKV-PSQIGWAFGIGLERIAMLLFGIPDIRLFWSKDSRF 361
                   455667777899***********************...9**********************.7788******************************* PP

                   HGGG CS
  tRNA-synt_2d 242 lrqf 245
                   l+qf
    KHJ30743.1 362 LDQF 365
                   *997 PP

>> FDX-ACB  Ferredoxin-fold anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.99   8.9e+03      27      48 ..     246     266 ..     236     282 .. 0.59
   2 !   72.9   0.0   2.4e-24   2.2e-20       1      94 []     382     484 .]     382     484 .] 0.99

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.99
                 HHHHH-TTEEEEEEEEEEESTT CS
     FDX-ACB  27 vreaagellesvqlfDvYrgkk 48 
                 ++++ ++ le+v +f++++  k
  KHJ30743.1 246 ITAHMKRSLENV-IFEIFTRAK 266
                 444444555554.566665544 PP

  == domain 2  score: 72.9 bits;  conditional E-value: 2.4e-24
                 -SS--EEEEEEEEEES...........SS-HHHHHHHHHHHH-TTEEEEEEEEEEESTTS-SSEEEEEEEEEE--SSS---HHHHHHHHHHHHHHHHTT CS
     FDX-ACB   1 SkfPaverDlalvvde...........kveaaelleavreaagellesvqlfDvYrgkklaegkkSlalrltlqskertLtdeevnaaiekvvealekk 88 
                 Sk+P  ++D+++++++           k+ +++++++vr+ ag+++esv+ +D + ++k  +g+ S ++r++++s e+tLt  e n ++e v ++l++k
  KHJ30743.1 382 SKYPGTYKDVSFWINDisnsnnmgqaaKFCENDVMQIVRDVAGDTVESVRKVDAFYHPK--TGRTSWCYRVNYRSLEKTLTSIEANMLHEAVKKELVNK 478
                 9************************999999****************************..9************************************* PP

                 .T-BES CS
     FDX-ACB  89 lgaelR 94 
                 l++elR
  KHJ30743.1 479 LSVELR 484
                 *****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 3655.43
//
Query:       KHJ30744.1  [L=247]
Description: putative mitochondrial dicarboxylate carrier [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.7e-46  154.4   0.1    1.2e-15   57.2   0.0    3.0  3  Mito_carr  Mitochondrial carrier protein
  ------ inclusion threshold ------
       0.15   11.3   0.1       0.36   10.1   0.0    1.5  1  Ofd1_CTDD  Oxoglutarate and iron-dependent oxygenase degradat


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.1   1.6e-13   1.4e-09      50      95 ..       3      48 ..       1      50 [. 0.93
   2 !   56.4   0.0   2.3e-19     2e-15       5      94 ..      53     144 ..      49     147 .. 0.88
   3 !   57.2   0.0   1.3e-19   1.2e-15       7      94 ..     155     236 ..     150     239 .. 0.94

  Alignments for each domain:
  == domain 1  score: 37.7 bits;  conditional E-value: 1.6e-13
                HHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr 50 dvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95
                +++++i+++eG +g+y+Gl+++llr+a +s  +f++ye+lk  +  
  KHJ30744.1  3 KIFRQILQNEGPLGFYQGLSASLLRQATYSTTRFGVYEFLKSNFSS 48
                789**************************************98865 PP

  == domain 2  score: 56.4 bits;  conditional E-value: 2.3e-19
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS..HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa..ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                 +   l++++++g ++++  +P+dv+ +r+q ++    ++++++   ld l ++  eeG ++l+rG++pn +r +  +a ++++y++lk+++ 
  KHJ30744.1  53 MPVLLAMASVSGFLGGISGNPVDVLNVRMQHDAALPPNQRRNYknPLDGLIRMTNEEGWKSLFRGVWPNSIRASLMTASQLASYDSLKNIII 144
                 55668999***********************88875444444445*******************************************9986 PP

  == domain 3  score: 57.2 bits;  conditional E-value: 1.3e-19
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   7 kellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                  +++a+++ag vat+v+ P+dv+Ktr++ ++++++      i + +  ++++eG++  +rG+lp+++r  p + ++f++ e+ k+l+ 
  KHJ30744.1 155 THFAASLFAGFVATTVCSPVDVIKTRIMCSAETKS------ISRFIVDVFRQEGVSWAFRGWLPSFTRLGPHTIATFLFLEQHKNLYR 236
                 689****************************9977......888999*************************************9986 PP

>> Ofd1_CTDD  Oxoglutarate and iron-dependent oxygenase degradation C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0     4e-05      0.36     114     149 ..     203     246 ..     178     247 .] 0.83

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 4e-05
                 HSHHHHHHHHHHHSE.EE........-EEEEEEEEE-TTT-EE- CS
   Ofd1_CTDD 114 kskafrkwlalitgldll........tsesilarRfrpGkdytL 149
                  s afr wl  +t+l +         ++++ l rRf++ +dyt+
  KHJ30744.1 203 VSWAFRGWLPSFTRLGPHtiatflflEQHKNLYRRFKEHSDYTV 246
                 5889***********6669999***99****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       412  (0.0229795); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1897.65
//
Query:       KHJ30745.1  [L=493]
Description: putative 6-phosphogluconate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     5e-128  426.5   0.0   6.2e-128  426.2   0.0    1.1  1  6PGD           6-phosphogluconate dehydrogenase, C-terminal d
    2.3e-49  167.6   0.0    3.5e-49  167.0   0.0    1.3  1  NAD_binding_2  NAD binding domain of 6-phosphogluconate dehyd
  ------ inclusion threshold ------
      0.054   12.8   0.1       0.12   11.7   0.1    1.5  1  2-Hacid_dh_C   D-isomer specific 2-hydroxyacid dehydrogenase,
      0.091   11.7   0.0       0.14   11.1   0.0    1.2  1  PGK            Phosphoglycerate kinase
       0.11   13.1   0.0       0.23   12.1   0.0    1.7  1  F420_oxidored  NADP oxidoreductase coenzyme F420-dependent


Domain annotation for each model (and alignments):
>> 6PGD  6-phosphogluconate dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  426.2   0.0  1.7e-131  6.2e-128       1     289 []     181     479 ..     181     479 .. 0.97

  Alignments for each domain:
  == domain 1  score: 426.2 bits;  conditional E-value: 1.7e-131
        6PGD   1 GhyVKmvHNGieygdmqliaEaydllkkvlglsneeiaevFeeWnkgelesyLieitakilrkkdeedgkplvdkilDkagqkGTgkwtvqealelgvp 99 
                 GhyVKmvHNGieygdmqli+Eayd++k++l lsn+ei++vF++Wnkg l+s+Lieit++i+ ++de+dg+pl++kilD+agqkGTgkwt+++al+lg+p
  KHJ30745.1 181 GHYVKMVHNGIEYGDMQLICEAYDIMKRALCLSNKEIGDVFAKWNKGVLDSFLIEITRDIMYYNDETDGSPLLEKILDSAGQKGTGKWTAINALDLGMP 279
                 9************************************************************************************************** PP

        6PGD 100 vptiaeavfaRllSslkeervkaskllk..eeeekeeedkeefiedlrkAlyaskivsYaqglellkaaskeygwnlnlaeiariWrgGCiIrakfldk 196
                 v++iaeav +R+lSs k+er++ask+l+  ++++k++ +k++f++dl++Alyaski+sYaqg++l+++a+keygw+ln  +ia +WrgGCiIr+ fl++
  KHJ30745.1 280 VTLIAEAVLSRCLSSIKSERTRASKALQfvSRSTKFDGNKDQFLDDLEQALYASKIISYAQGFMLMQEAAKEYGWKLNKPSIALMWRGGCIIRSVFLKD 378
                 ***************************744445599999************************************************************ PP

        6PGD 197 ikeafeknpelenllldpefakelkealealrrvvalaveagipvpalsaalaYldslrserlpanliqaqrDyFGahtyervdk........egkfht 287
                 i++a+++n++lenll++++f+k++++a++ +r+vv++a+  gip+pa+s+al+++d++rse+lpanl+qaqrDyFGaht++ + +        ++++h+
  KHJ30745.1 379 ITAAYRANNDLENLLFNDFFNKAIHKAQPGWRNVVSKAALLGIPTPAFSTALSWFDGYRSENLPANLLQAQRDYFGAHTFKIKPEfanekykdGENIHV 477
                 *********************************************************************************998888888888888999 PP

        6PGD 288 eW 289
                 +W
  KHJ30745.1 478 NW 479
                 99 PP

>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.0   0.0   9.7e-53   3.5e-49       2     158 .]       8     176 ..       7     176 .. 0.96

  Alignments for each domain:
  == domain 1  score: 167.0 bits;  conditional E-value: 9.7e-53
                    EEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT.....EEE-SSHHHHHHHC...SEEEE-SSSHHHHHHHHHSHCCC--TT-EEEE- CS
  NAD_binding_2   2 igfiGlGvMGsnmalnllkagykvavynrtkekveelvaeg.....akaaesieelvasl...dvvitmvkagkavdeviegllealkkgdilidg 89 
                    +g+iGl+vMG+n++ln +++g++v++ynrt +kv+++++++     +++a si+e+v++l   + ++++v agk+vd++ie ll+ l++gdi+idg
     KHJ30745.1   8 FGLIGLAVMGQNLILNAADHGFNVIAYNRTVAKVDHFLENEakgksIEGARSIQEFVSKLkkpRRIMLLVMAGKPVDDFIETLLPFLDQGDIIIDG 103
                    89**************************************889999************************************************** PP

                    S---HHHHHHHHHHHHHTT-EEEEEEEESHHHHHHHT-EEEEEEE-HHHHHHHHHHHHHHEE......EEEEE-E CS
  NAD_binding_2  90 stsspedtrelakelkekglkfldaPVSGGeegAekGtLsimvGGseeafervkpvleaiga......kvthviG 158
                    ++s++ dt++++k+l+ kg++f++ +VSGGeegA+ G+ s+m+GG+eea++ +k+v+++i+a      ++  ++G
     KHJ30745.1 104 GNSHFPDTNRRTKYLAGKGIRFVGSGVSGGEEGARYGP-SLMPGGNEEAWPYIKDVMQSIAAksdgepCCE-WVG 176
                    **************************************.**********************9777776665.655 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   3.4e-05      0.12      39      80 ..       8      49 ..       2      66 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 3.4e-05
                  EEEES-SHHHHHHHHHHHHTT-EEEEESSSHHHHHCHHHHTC CS
  2-Hacid_dh_C 39 vGiiGlGrIGqavakrlkafgmkviaydrskkkeeeeeelgv 80
                   G+iGl  +Gq+++  ++  g++viay+r+  k +++ e+++
    KHJ30745.1  8 FGLIGLAVMGQNLILNAADHGFNVIAYNRTVAKVDHFLENEA 49
                  79****************************998775444444 PP

>> PGK  Phosphoglycerate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   3.9e-05      0.14     150     215 ..      37     105 ..      29     111 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.9e-05
                 TTTHHHHCS.EEEE-HHHH..HHHHHHHHHHHS--SSEEEEEEES-HHHCHHHHHHHTTT-SEEEEETC CS
         PGK 150 Stvgiakvl.saaaGllme..kElealskvlenperplvailGGakvsdkikvienLlekvdkliigGg 215
                 +++++ ++l ++a G ++e  + ++ + + l++p+r ++++++G+ v+d i+ +   l++ d +i gG 
  KHJ30745.1  37 TVAKVDHFLeNEAKGKSIEgaRSIQEFVSKLKKPRRIMLLVMAGKPVDDFIETLLPFLDQGDIIIDGGN 105
                 56778888854488888874467888889999******************************9999985 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   6.4e-05      0.23       2      92 ..       8     101 ..       7     106 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 6.4e-05
                    EEEETTSHHHHHHHHHHHHTTS-GGCEEEEEESSCCCHHHHHHHHC.......-EEECECHHHHHHH-SEEEE-S-HHHHHHHHHHCGHHHHTTSE CS
  F420_oxidored   2 igiiGaGnmgealasgllaagaqpheivvansrnpekaeelaeelg.......vkvtavdneeaaeeadvvvlavkpedveevlselakdalkgkl 90 
                    +g+iG   mg+ l+++++ +g    +++ a +r+  k++++ e+         ++ ++   +++ +   + +l +  + v+++++ l + +++g +
     KHJ30745.1   8 FGLIGLAVMGQNLILNAADHG---FNVI-AYNRTVAKVDHFLENEAkgksiegARSIQEFVSKLKKPRRIMLLVMAGKPVDDFIETLLPFLDQGDI 99 
                    699******************...****.99*********98654334554442222223333333444444555555555555555555555555 PP

                    EE CS
  F420_oxidored  91 vi 92 
                    +i
     KHJ30745.1 100 II 101
                    55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (493 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3342.92
//
Query:       KHJ30746.1  [L=961]
Description: putative spc97 spc98 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-39  136.3   2.7    3.4e-39  135.3   2.7    1.5  1  GCP_N_terminal  Gamma tubulin complex component N-terminal
    4.3e-28   98.7   8.4    1.1e-27   97.3   8.4    1.7  1  GCP_C_terminal  Gamma tubulin complex component C-terminal


Domain annotation for each model (and alignments):
>> GCP_N_terminal  Gamma tubulin complex component N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.3   2.7   3.8e-43   3.4e-39       1     305 [.     235     548 ..     235     548 .. 0.88

  Alignments for each domain:
  == domain 1  score: 135.3 bits;  conditional E-value: 3.8e-43
  GCP_N_terminal   1 lrdllylLqGisgklirfdekdd..ervvkdvrlpgllppslrslverllelgtlyrrlrkfveevsrsesglvlqalaaaldeelteyyrliaq 93 
                     +r++l++L G++ +l++++++++   +  kd  l+++++ +  +++ +l++ gt   +lr +v++   s++  +lqa++ a+ e l+ ++ l+++
      KHJ30746.1 235 IREVLFMLGGYPTTLFKINSQTSviIEAAKDYALKHVSHDCFMNILRTLASQGTITIKLRLWVKS---SQVNPLLQAFQLAILEWLDKFDVLLSE 326
                     89******************99988888889999*****************************99...9************************** PP

  GCP_N_terminal  94 lEsqlledsesi.ltLlrlevwlqetllllrvLanlveeve.kanlkggallsllhe..aaq...hgdpkvrkllsellervsrpflemlekWil 181
                     + +++l+ s+++ ++Ll+++ ++ +t   l  L ++++ +e + n++ + +l+ l++    +    gd+++ + + +++ ++  ++l+ +++Wi 
      KHJ30746.1 327 IHQRFLSPSNNTvVSLLKVWQEITPTVSFLTHLVEITRIIEqEPNQHAFLYLEMLYNltC-TsqmAGDDAIYSNIGKVFFHCFLVYLRPIRAWIE 420
                     *******998778*************************999778889**********862.24689***************************** PP

  GCP_N_terminal 182 eGel..sDpynEfFveenesvakeklkeddseklweekYtlr.....kemlPsflseelaekIletGkslnflrescgdsewiektes.eekele 268
                     +Gel  +Dp+  fFv+e+ +         + ++lwe+++++r       ++P+fl++ +a +I++tGks+ +l+++++ s  +++ +   e  l+
      KHJ30746.1 421 DGELrkDDPN--FFVRESIENV-------ELSSLWETRFKVRktkddVLHVPCFLRH-VAYRIFNTGKSIVLLKYLNQASL-LQTINRsMEPPLD 504
                     ****744775..***7765553.......889**********88777778*******.******************77755.4433232234443 PP

  GCP_N_terminal 269 yiddle..........elssslslsleelidsayklaskrllelLfk 305
                     +   +           ++++ +  s++++++s +++a++ l + Lf+
      KHJ30746.1 505 F---ETvckpatfqlvPFMELFNISFDAWVSSKHQYAASLLKDTLFN 548
                     3...113345556666899999*********************9996 PP

>> GCP_C_terminal  Gamma tubulin complex component C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.3   8.4   1.2e-31   1.1e-27       1     291 [.     552     939 ..     552     955 .. 0.82

  Alignments for each domain:
  == domain 1  score: 97.3 bits;  conditional E-value: 1.2e-31
  GCP_C_terminal   1 LlehLkllkrylLlgqgdFisrLldalfdelwkpass.elrlaLtslLeeairssnaqqsdelkddlsfal.dlpevleeldakldpdslegldf 93 
                     L++ L +l ++++l +g+  s+++ ++f++l++  +s   r     +L e+ r++ +  s+ l ++l++++ +l +  ++l+ k + +s++ + +
      KHJ30746.1 552 LHASLDALSHIYFLADGSIGSLFVATIFKNLDNLKTSwNDR----FTLTECARNKFSLVSSVLSERLHMSMsSLAQNHQNLK-K-SRKSVKVFTA 640
                     7889***************************9998884445....66777777665544567899**999965555344554.4.456899**** PP

  GCP_C_terminal  94 ltLeYkvpwplslvitpealekYqriFrfLlrvkrvefalsslw.krrkatgarsvllkra..rllrqemlhfvsqlqyYvldeviessWrelee 185
                     + L+Y+ +wp++++itp a+  YqriF fLl+v+r    l++   + ++ +   +   k a  + lr +++ f +++ yY+++ v+e+  +++++
      KHJ30746.1 641 IELKYQLSWPIQIIITPMAMPLYQRIFIFLLQVRRTSEILTRETsQLDRLNCIYEIDEK-AlyYSLRMRLIWFTQTIYYYLTSLVLEPCTQKMKT 734
                     ****************************************9533222222222222233.147******************************** PP

  GCP_C_terminal 186 klkkeatdldelieaHeafLdsilkkclLrsk.kkllklleeilelileFak.vldglylsvselt............................. 249
                      l+++++ +d +i++H +++++++++ lL+++ + + +++ ++l+l +  ++ +l++   +v+++t                             
      KHJ30746.1 735 DLRAAED-VDMMINVHVDYIKKCIDQSLLGKNlEIIYSTVMNVLDLGICLRDaRLNN--DAVTKFTlnernslmdlsiaglglyttnhhyrqqeh 826
                     **75555.*********************9995556688888877766666644444..56666568888899********************** PP

  GCP_C_terminal 250 ........................................................................aeeaeeeelee.kleerleelek 271
                                                                                             +++  +++++   + ++l++l++
      KHJ30746.1 827 qksdirsprynrrhytynnnnnnnnrkwnddsssdddysyykkikkkennleiidndlsilrspsklssdsfEDD--NDHISVfPYISQLRHLKA 919
                     *******************************************************************98854333..3333333467******** PP

  GCP_C_terminal 272 eFrkkvslllkvlralkeqe 291
                     +F+++v+++ + l+++++ +
      KHJ30746.1 920 TFNRHVRFIANGLKGVARAT 939
                     ************99984433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (961 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       901  (0.0502538); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.25s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 6645.74
//
Query:       KHJ30747.1  [L=218]
Description: putative protein kinase regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.6e-72  241.3   0.0    7.3e-72  240.9   0.0    1.1  1  Mob1_phocein  Mob1/phocein family


Domain annotation for each model (and alignments):
>> Mob1_phocein  Mob1/phocein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.9   0.0   4.1e-76   7.3e-72       1     165 [.      35     202 ..      35     206 .. 0.98

  Alignments for each domain:
  == domain 1  score: 240.9 bits;  conditional E-value: 4.1e-76
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
  Mob1_phocein   1 eatlgsgdlkeavklPkgedlneWlavhvvdffneinllygtisefcteqscptmsagpkyeYlwade.evkkpvklsApeYidllmdwiesqlnd. 95 
                   eatlg g+l+++v+lP+ged+neWlav++vdf+n+inllyg+i+efc++qscp+m+a+++yeYlw+d  ++k+p+k++Ap+Yi++lm w++s +++ 
    KHJ30747.1  35 EATLGGGSLRKIVRLPEGEDENEWLAVNLVDFYNHINLLYGSITEFCSPQSCPEMKATDEYEYLWQDPeNFKRPTKMAAPTYIEHLMGWVQSSIDNe 131
                   589999*************************************************************955*************************** PP

                   .xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Mob1_phocein  96 .lfpskagspfpknflkvvkkilkrlfrvyaHiYihHfeeiaeleleahlntcfkhfvlfvkeFkLidkke 165
                    +fpsk+g+pfpk+f +++++++kr++rvyaHiY+hH+  i+el+leahlnt+fkh++lf++e++L + k+
    KHJ30747.1 132 aIFPSKTGVPFPKSFPSIIRQVFKRMYRVYAHIYCHHYPVIRELGLEAHLNTSFKHYILFIDEHHLASGKD 202
                   ******************************************************************99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       282  (0.0157287); expected 358.6 (0.02)
Passed bias filter:                      261  (0.0145574); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1591.63
//
Query:       KHJ30748.1  [L=412]
Description: putative negative regulation of gluconeogenesis [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-33  115.4   0.6    3.3e-33  114.7   0.6    1.4  1  CLTH      CTLH/CRA C-terminal to LisH motif domain
      4e-05   23.4   0.0    0.00011   22.0   0.0    1.8  1  LisH      LisH


Domain annotation for each model (and alignments):
>> CLTH  CTLH/CRA C-terminal to LisH motif domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.7   0.6   3.6e-37   3.3e-33       2     147 ..     164     307 ..     163     308 .. 0.94

  Alignments for each domain:
  == domain 1  score: 114.7 bits;  conditional E-value: 3.6e-37
        CLTH   2 ikerqkIiklilegdlseaiewinenkpellesnsnLeFkLkllqfielirg..ktkdieealeyarenlefendehlkelekamsLLafsdpeskels 98 
                 + +++kI++++ +++++ea+ w+ enk+el+++ snLeF L+l+q+iel+r   + ++++e + +a+++l ++  ++ +e+ +a +LLaf++ +     
  KHJ30748.1 164 FVQMNKIRESLMNQSVTEALVWCHENKKELRRMESNLEFLLRLQQYIELVRTqdQ-SKLLESISHAKKYLHPYRASYPREVRQACGLLAFPPETR---A 258
                 889************************************************5433.56************999999***************9555...6 PP

        CLTH  99 splknlldpsrrekvakefnsailkllglskespLeillsaglsalktl 147
                   ++ l+++ r++ +a++f ++   ll+l++++ L+i+lsaglsalkt 
  KHJ30748.1 259 PVYAILYSQDRWQILANLFSQTHNTLLSLPSSPLLHIALSAGLSALKTP 307
                 699999999*************************************986 PP

>> LisH  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   1.3e-08   0.00011       2      26 ..     128     152 ..     127     152 .. 0.96

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 1.3e-08
                 HHHHHHHHHHHHCT-HHHHHHHHHH CS
        LisH   2 eLNrLIydYLvkeGyeetAeaFekE 26 
                 +L+rL+ dYL+ +G++ +A a++kE
  KHJ30748.1 128 RLDRLMVDYLLRNGFQNSAVALAKE 152
                 69**********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1063  (0.0592894); expected 358.6 (0.02)
Passed bias filter:                      602  (0.0335769); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 2749.45
//
Query:       KHJ30749.1  [L=292]
Description: putative helix-loop-helix protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.5e-12   46.1   0.4    6.9e-12   45.1   0.4    1.5  1  HLH            Helix-loop-helix DNA-binding domain
  ------ inclusion threshold ------
      0.021   14.9   1.0      0.021   14.9   1.0    2.1  3  GIT1_C         G protein-coupled receptor kinase-interacting 
       0.11   12.2   0.1       0.18   11.5   0.1    1.3  1  Pox_A30L_A26L  Orthopoxvirus A26L/A30L protein


Domain annotation for each model (and alignments):
>> HLH  Helix-loop-helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.1   0.4   1.2e-15   6.9e-12       1      52 [.     180     227 ..     180     228 .. 0.91

  Alignments for each domain:
  == domain 1  score: 45.1 bits;  conditional E-value: 1.2e-15
                 HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS
         HLH   1 rraahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 
                 r+ +h+e+ErrRR+ iN++++eL +++P    +   +K +iL++Av++I +L
  KHJ30749.1 180 RKDNHKEVERRRRETINEGINELAKIVP----GCEKNKGSILQRAVQFITEL 227
                 7899************************....34459************998 PP

>> GIT1_C  G protein-coupled receptor kinase-interacting protein 1 C term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1       0.5     3e+03     100     100 ..      62      62 ..      20     110 .. 0.61
   2 ?   -2.0   0.1      0.63   3.8e+03      27      27 ..      89      89 ..      54     125 .. 0.55
   3 ?   14.9   1.0   3.5e-06     0.021      10      85 ..     190     269 ..     180     282 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.5
      GIT1_C 100 v 100
                 v
  KHJ30749.1  62 V 62 
                 1 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.63
      GIT1_C 27 q 27
                q
  KHJ30749.1 89 Q 89
                2 PP

  == domain 3  score: 14.9 bits;  conditional E-value: 3.5e-06
      GIT1_C  10 rkteqitkriqeLlqaaq..eekkesfvpcaerIqsaVqdlvalfpenlseetlrt.....aLkqLtssaerLqeeCeelqea 85 
                 r+ e+i   i+eL + +   e+ k s+    +r  + +++l ++ ++n ++ tl++     a+ +L++s+ +L++eC ++ ++
  KHJ30749.1 190 RRRETINEGINELAKIVPgcEKNKGSIL---QRAVQFITELKEIEAQNIEKWTLEKllteqAIAELSASNDKLKTECDRAWRE 269
                 67899***********993334444444...4555778888888888888888877544446****************99883 PP

>> Pox_A30L_A26L  Orthopoxvirus A26L/A30L protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   2.9e-05      0.18      31      84 ..     173     227 ..     162     244 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.9e-05
  Pox_A30L_A26L  31 detwdkkiean.tcisrkhrniihevirdfmkaypkmdenkksplgapmqwltqy 84 
                     e w k  + n   + r++r+ i e i ++ k  p  ++nk s l   +q++t+ 
     KHJ30749.1 173 SEEWHKLRKDNhKEVERRRRETINEGINELAKIVPGCEKNKGSILQRAVQFITEL 227
                    5778886555515799************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1199  (0.0668749); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2196.47
//
Query:       KHJ30750.1  [L=748]
Description: putative arp8-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-24   86.2   0.0    3.3e-16   58.9   0.0    2.9  2  Actin        Actin
    4.3e-09   36.0   2.0    2.4e-06   27.0   1.0    2.4  2  Actin_micro  Putative actin-like family
    2.8e-05   23.1   0.0     0.0019   17.1   0.0    2.2  2  MreB_Mbl     MreB/Mbl protein
  ------ inclusion threshold ------
      0.018   15.4   0.0      0.062   13.7   0.0    1.9  1  FtsA         Cell division protein FtsA


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.9   0.0   7.4e-20   3.3e-16       3     197 ..     109     409 ..     107     460 .. 0.83
   2 !   23.5   0.0   4.2e-09   1.9e-05     322     404 ..     658     742 ..     639     744 .. 0.84

  Alignments for each domain:
  == domain 1  score: 58.9 bits;  conditional E-value: 7.4e-20
       Actin   3 evsavVlDnGssttraGyagedaPkavipslvgkprgrkvea......................................................... 44 
                  ++ +V+ +Gs+++r+G a++  Pk++   + +k +++++e                                                          
  KHJ30750.1 109 ASKIIVIHPGSQNLRIGLASDALPKSIPMVVAAKWKHTESEVsepipkrrktdsapeqqfgeefskkytnmtsalkiemrankikvlpnskevvvnfnr 207
                 6788*********************9877777788888877799************9999999999999999999999999999999999999999999 PP

       Actin  45 ...........................klyvgdealt....krpelevrspvedGvved.........wdaveelwehvlkeelkvdp....eehplll 99 
                                            kl++g++al+    ++p +++  p+++G+  +         +d+++ +++++l++e+ +++    ++++ ++
  KHJ30750.1 208 rtepekieehndalriewtevgkdgqnKLFIGQNALRipddSNPPYKLFWPIRHGCFHEndyftsghlYDDFSIIIQKSLQDEIGIRRdiewKQYSCVF 306
                 999999999999999999999999999999999966554434888999999999999881222222222344556666666666655366668899999 PP

       Actin 100 tepplnppkqrekalEivfEkfkvpalylaksavlsafasgkstglvvDsGasvtsvvpVldGyvLkkairrsdlgGkaLteqlkellss.....knve 193
                 + p l  +   e++l++++  f+++ +++ ++ + ++f sg +++++vD+Ga++ts++ V dG+ ++ +  +++ gG ++te + +++ +      +++
  KHJ30750.1 307 VIPDLYDKRYVEQILDMCLKRFGFKQVCFIQESMAASFGSGFTSACIVDIGAQKTSICCVEDGMCIEDSRINLKYGGFDVTETFIKMMLHdhfpyADIN 405
                 999999999**************************************************************************9988766344444444 PP

       Actin 194 vtpr 197
                 +++r
  KHJ30750.1 406 LRRR 409
                 4444 PP

  == domain 2  score: 23.5 bits;  conditional E-value: 4.2e-09
       Actin 322 peLlanivvtGGnsllpglteRlekelaqlaskgv..kvkiiapee..erkysaWiGGSiLAslgtfqqlwvskqEYeEqGssvver 404
                 ++++  i v GG + +p+lt+ le+ l++   +++  k+ + +++   + +  +W G+S++A+++t ++ wv ++EYe  G++v   
  KHJ30750.1 658 RDFFGGIMVIGGGAKTPNLTQYLEARLRTS-RPDLgeKLLVGTSPRemDGQVVVWKGASVYARMKT-HESWVGQEEYERLGNRVLYH 742
                 679999***********************5.55443477776666668999***********9876.789***********998765 PP

>> Actin_micro  Putative actin-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   1.0   5.3e-10   2.4e-06     100     193 ..     283     376 ..     265     475 .. 0.77
   2 !    7.5   0.0   0.00044         2     328     367 ..     708     746 ..     695     748 .] 0.90

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 5.3e-10
  Actin_micro 100 ivysLesevllkeelkpkdiFvslvfkdtlnrseilalvdlflnisgfkGilllPesLalclglgiqsaiviseyekhttvslveDyvlldsft 193
                  i +sL+ e+ ++ +++ k+    +v +d++ +  + ++ d+ l+  gfk +    es+a  +g g+ sa +++   ++t ++ veD + ++   
   KHJ30750.1 283 IQKSLQDEIGIRRDIEWKQYSCVFVIPDLYDKRYVEQILDMCLKRFGFKQVCFIQESMAASFGSGFTSACIVDIGAQKTSICCVEDGMCIEDSR 376
                  56799****************************************************************999999999********76554333 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.00044
  Actin_micro 328 ssilrgakvlkelevsKelWlTDkEWnsvrlRvLKeKvLF 367
                   ++++ga v++++ +  e W+  +E++  + RvL  KvL+
   KHJ30750.1 708 VVVWKGASVYARMKT-HESWVGQEEYERLGNRVLYHKVLW 746
                  5799********986.699*******************97 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   4.3e-07    0.0019      99     192 ..     307     398 ..     281     431 .. 0.79
   2 !    3.7   0.0     0.005        23     276     297 ..     663     684 ..     618     688 .. 0.92

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 4.3e-07
                 EE-SS--HHHHHHHHHHH.HHTT-SEEEEEEHHHHHHHHTT--TTSSS-EEEEEE-SS-EEEEEEETTEEEEEEEE..S-SHHHHHHHHHHHHHHHH CS
    MreB_Mbl  99 cvPsgiteverrAvkeaa.kkaGarevllieeplaAAiGaglpveepsgnmvvdiGggttevavislggivtsksv..rvaGdeldeaiikyirkky 192
                  +P   ++   + + +++ k+ G ++v  i+e++aA  G+g      ++  +vdiG+ +t++  +  g  ++ +++  + +G ++ e+ ik + +++
  KHJ30750.1 307 VIPDLYDKRYVEQILDMClKRFGFKQVCFIQESMAASFGSGF-----TSACIVDIGAQKTSICCVEDGMCIEDSRInlKYGGFDVTETFIKMMLHDH 398
                 5555554444444555542789*******************8.....6789**************99999988876336788888888888776655 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.005
                 -EEEESGGGGSBTHHHHHHHHH CS
    MreB_Mbl 276 givltGGgallkgldkllseet 297
                 gi++ GGga+  +l ++l+ ++
  KHJ30750.1 663 GIMVIGGGAKTPNLTQYLEARL 684
                 9****************99765 PP

>> FtsA  Cell division protein FtsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.4e-05     0.062       1      86 [.     352     684 ..     352     707 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.4e-05
                 EEEEE-SSSEEEEEEETTEEEEEEEES-..-HHHHHHH..............HHHHHT--HHHHHHHHHHH--S--EEEEEHHHHH............. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............. RF
        FtsA   1 alvDiGagktdvavaedgalvhlrvigv..ggngitkd..............iakalrtaveeAerikikyGsalaekeigrkels............. 70 
                 ++vDiGa+kt++  +edg  +  + i++  gg  +t+               i    r  +  Ae++ki+  + +  k+++++  +             
  KHJ30750.1 352 CIVDIGAQKTSICCVEDGMCIEDSRINLkyGGFDVTETfikmmlhdhfpyadINLRRRYDFLLAEELKINLCTMN-AKNVSQQLFNfhlripnehtyky 449
                 68*****************99955555556999999999888888888886666666888889999996644444.45555444446666666666666 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
        FtsA  71 ................................................................................................... 70 
                                                                                                                    
  KHJ30750.1 450 nfkacdevmlapmgffdplifdnseklvgrrklidrsynaydadipddptsaaqlailawikpsisstvngphshtnvinngildtatpskeksnpmnl 548
                 677777777777777777777766666666666678888888888888888888888888888888888888888888888888888888888888888 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
        FtsA  71 ................................................................................................... 70 
                                                                                                                    
  KHJ30750.1 549 lsrldetninsrvtsaavspapeeakshpftlsnsnihgespapsgnhanngshlssvnsqtagiildqatrspkdlaierdsvlpiapldmaiitsii 647
                 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 PP

                 .....................GGGGSTTHHHHHHHHH CS
                 .....................xxxxxxxxxxxxxxxx RF
        FtsA  71 .....................ggsalpnleelaeral 86 
                                      gg++ pnl++++e  l
  KHJ30750.1 648 hgakgddkkardffggimvigGGAKTPNLTQYLEARL 684
                 8888888888888888888888888888887777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (748 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       484  (0.0269954); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 5268.81
//
Query:       KHJ30751.1  [L=134]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       217  (0.0121033); expected 358.6 (0.02)
Passed bias filter:                      210  (0.0117129); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.25s 00:00:00.58 Elapsed: 00:00:00.36
# Mc/sec: 1102.69
//
Query:       KHJ30752.1  [L=99]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       613  (0.0341904); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 796.14
//
Query:       KHJ30753.1  [L=129]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 964.02
//
Query:       KHJ30754.1  [L=226]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1659.16
//
Query:       KHJ30755.1  [L=524]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
        3.3    7.8   6.9       0.27   11.3   1.2    2.2  2  ArfGap          Putative GTPase activating protein for Arf


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1      0.35   6.2e+03      64     100 ..     180     216 ..     174     223 .. 0.64
   2 ?   11.3   1.2   1.5e-05      0.27      15      91 ..     411     485 ..     400     504 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.35
                 HHHHHHHHTCHHHHHHHHTTTC-TTTSG-TTCGHHHH CS
      ArfGap  64 eelellkalgNkkaneileaklpkeekrskssskekr 100
                 +  ++++++g kka+ +l  k ++ + ++++++ +++
  KHJ30755.1 180 RTWATVARNGQKKARVTLSMKTQAVPTSKATQRVTNK 216
                 5566777888888888888887666666444444444 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 1.5e-05
                 B-TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG CS
      ArfGap  15 vCaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekr 91 
                  C +Cg+++ +   l ++++ C +C g Hrs  ++    r ++    ++e+++ +++ g+++++++l ak  +e+  
  KHJ30755.1 411 SCGNCGSTNHSE-GLCMATTKCRNCGGPHRSD-SRRCLARPTRSGAPTKEQMKAFRQAGEREFQAVLRAKAAEESAT 485
                 699998777654.44567788**********8.667788999999************************99777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (524 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1010  (0.0563333); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3633.24
//
Query:       KHJ30756.1  [L=104]
Description: hypothetical protein EV44_g3724 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00057   20.1   0.3      0.001   19.3   0.3    1.4  1  Retrotrans_gag  Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.3   5.6e-08     0.001       4      68 ..      29     104 .]      27     104 .] 0.82

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 5.6e-08
  Retrotrans_gag   4 stslegaAkswlk.slvarsida.........sesWk.dlkkaflktflpserkdqleeelsslrQ.gtesvreYvt 68 
                      + +eg+A+swl+ ++v r i +         +  +k +lk++f ++ ++ +++ +l+++++ + Q ++e ++ Y++
      KHJ30756.1  29 DILFEGEAASWLHsNSVLRAIVNnrqsatdkqVADFKvQLKERFPAKLVN-HTEGDLQDDIKIFAQkDSEALTTYYQ 104
                     57899******973577777777899999888444443788888888888.************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 812.32
//
Query:       KHJ30757.1  [L=705]
Description: putative translocation protein sec63 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-16   60.8   2.9    1.3e-16   60.5   0.8    2.3  2  DnaJ       DnaJ domain
      4e-11   42.6   0.0    1.2e-10   41.0   0.0    1.8  1  Sec63      Sec63 Brl domain
  ------ inclusion threshold ------
       0.14   12.4   0.0        0.5   10.5   0.0    1.9  2  DUF2407_C  DUF2407 C-terminal domain
        8.4    5.6   8.9         13    4.9   8.9    1.3  1  NOA36      NOA36 protein


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.99   4.4e+03       4      22 ..      33      53 ..      31      59 .. 0.71
   2 !   60.5   0.8   2.9e-20   1.3e-16       1      62 [.     106     174 ..     106     175 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.99
                HHHTSSTT..G-HHHHHHHHH CS
        DnaJ  4 eiLgvskd..asedeIkkaYr 22
                ++L+ +++  a+++ Ik ++r
  KHJ30757.1 33 SLLKPNSNtgATASRIKTEFR 53
                555555444489999**9998 PP

  == domain 2  score: 60.5 bits;  conditional E-value: 2.9e-20
                 HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHH.......HHHHHHHHHHHHTSHHHHHHH CS
        DnaJ   1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaee.......kFkeineAyevLsdpekRkqY 62 
                 ++Y+iLg+s++a+e++Ik+ Yr+++lk+HPDk + d++++e        F e+++Ay+ L+d+e R++Y
  KHJ30757.1 106 NPYDILGISESATEKQIKSHYRRMSLKFHPDKVRPDTSKNEtiqslndYFVELTKAYKALTDEEIRNNY 174
                 68*****************************77444433333444555*******************99 PP

>> Sec63  Sec63 Brl domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.0   0.0   2.8e-14   1.2e-10      16     256 ..     239     624 ..     232     625 .. 0.80

  Alignments for each domain:
  == domain 1  score: 41.0 bits;  conditional E-value: 2.8e-14
                 HHHHHHHHHS-TT--HHHHHHHHHTSGGGGGS---TTHHHHHHHHHHT............SSS--...........SSSTTSHHHHHHHHHHHHHTT-- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxx...........xxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63  16 etiklfneslkpnttlkdlLeilssasEFeeipvReeEkkelkkLlek............vpikv...........kediespeaKvniLlqayisrlk 91 
                 e+ + + ++ k+  t+ +++++lss  EF +i   ++ + el+++ +k            +               +        K+  Ll ay++r++
  KHJ30757.1 239 ESANKLFREYKESITMGEIFSALSSGLEFHDIFKNHKSELELERVESKifapdntydsesL---AcgmtkknqkelQAMEFGIRRKTLGLLWAYLGRIE 334
                 55666667789999********************************998866666666651...044455543322222234567************** PP

                 -SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHTS-TT............................................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................................. RF
       Sec63  92 legsdlvsDlkyilqnairilralveillskgwlslalslleLskmveqrlwds............................................. 145
                 l++ +l+     i+  a  ++   + i+ + g  +++l+    ++++ q++ +                                              
  KHJ30757.1 335 LDDKALNRKKLEIAPIAHSLTVSFTAISFAFGSTTPVLKSYLAAQCIIQAIPPGgspllqlpyfnksiikeiegdsknhftiqrymklprlyrrkisig 433
                 ****************************************************9999******************************************* PP

                 ..........................................................S--EEEEEEE................CEBTTSEEEEEEEEE CS
                 ..........................................................xxxxxxxxxx................xxxxxxxxxxxxxxx RF
       Sec63 146 ..........................................................lPkleieaev................qpitrsklrvevtie 170
                                                                           +Pk+e  +++                + it ++ +++ +  
  KHJ30757.1 434 kgllteaqykvvttfarqlprlhvekvffkvtgekfittnslvtlvvkgriippgshnVPKVEE-TDLedidpdeddldallgrKKITGKDGTLKEQ-- 529
                 ******************9999999999999999999999999999999999999999999985.66633444444444333333333333333322.. PP

                 ESSSS-S..........CTSSS-CHTSBEEEEEEEEETTTTEEEEEEE..EEESSTTTTT.......EEEEEEEEEEE-.SSCCEEEEEEEEESSSSS- CS
                 xxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63 171 reeeesk..........pdfpwdkkgksekfwlvvedsendellaikr..vtlekkklas.......tqevkleftvplsepgpkqltvrlisdswlgl 250
                       +          p+f  d    s  + +++ ds++ ++        t+ k+  ++        q+ k +f++p s+ g+++++++li+ds++g+
  KHJ30757.1 530 ------SkshqpplaysPFFARDY---SPRWHIFLADSKQGKIAVPPFtfSTFDKSLFDEdgkptfnVQTLKAQFQAP-SQAGHYNFSMHLICDSYIGF 618
                 ......123445677889999999...***************97533321222222222233334567788899**95.6888**************** PP

                 EEEEEE CS
                 xxxxxx RF
       Sec63 251 dqevti 256
                 d+++++
  KHJ30757.1 619 DTRMDV 624
                 *99876 PP

>> DUF2407_C  DUF2407 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00011       0.5      24     117 ..     127     231 ..     112     238 .. 0.60
   2 ?   -3.9   0.0       3.1   1.4e+04      15      27 ..     587     599 ..     584     608 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00011
   DUF2407_C  24 rsiygseetpdtmpsdleeeeeeelreLEerWidstanaeeaaeaeeegeaakeee.......nsvd..........seeskanedlliGlliGfflgl 105
                 r++   +  pd+     + +++e++++L +  ++ t+  ++ + +e +++ a+  +          +          ++ +++   ll+++++Gffl+ 
  KHJ30757.1 127 RRMSL-KFHPDKVRP--DTSKNETIQSLNDYFVELTKAYKALTDEEIRNNYAQY-GhpdgkqsV--SigialpkfliTDGNGKYVLLLYAIMLGFFLPY 219
                 44333.333333222..357789***********99954444432222222222.234556450..34455555554666777778899*********9 PP

   DUF2407_C 106 falllllkeegl 117
                 ++  +   ++ +
  KHJ30757.1 220 VVGSWWYGTQRI 231
                 998998776655 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 3.1
   DUF2407_C  15 eieaLRsqFrsiy 27 
                 ++++L+ qF++  
  KHJ30757.1 587 NVQTLKAQFQAPS 599
                 6999*****9855 PP

>> NOA36  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   8.9     0.003        13     216     302 ..     616     702 ..     599     705 .] 0.54

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.003
       NOA36 216 cgyetqetkdlslstrslkfgrqkqadgsddddddeedsdydayl.kalasgddeddegdedddddddeedddeeeddedeeeeeeee 302
                  g++t+    l +   s+    q+++d s+ d+d + + +++a + + + s++ ++++ ++d  d++ + d +  ed ed+ e + e+
  KHJ30757.1 616 IGFDTRMDVTLMVEDSSKAVEIQAEDDISEPDED-SIAGQMNALKaGGIMSSSVKKKRISKDSSDEESDTDGEAREDSEDTSETDTET 702
                 5788888888888888888888887777776664.44444444330333344444444444444444444444444433333332222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (705 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       795  (0.0443416); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 4827.40
//
Query:       KHJ30758.1  [L=616]
Description: putative duf2347 superfamily protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   8.9e-101  337.2   0.2   1.4e-100  336.6   0.0    1.4  2  DUF2347   Uncharacterized conserved protein (DUF2347)
    2.4e-38  132.3   0.1    3.5e-37  128.5   0.1    2.3  1  DUF4484   Domain of unknown function (DUF4484)
    6.7e-05   22.8   0.0    0.00016   21.6   0.0    1.6  1  SPA       Stabilization of polarity axis
     0.0074   15.0   0.0       0.24   10.1   0.0    2.7  2  Avl9      Transport protein Avl9


Domain annotation for each model (and alignments):
>> DUF2347  Uncharacterized conserved protein (DUF2347)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  336.6   0.0  3.1e-104  1.4e-100       1     279 [.      30     349 ..      30     353 .. 0.96
   2 ?   -4.1   0.2       2.1   9.3e+03     136     148 ..     397     409 ..     369     429 .. 0.39

  Alignments for each domain:
  == domain 1  score: 336.6 bits;  conditional E-value: 3.1e-104
     DUF2347   1 lflikFDvkkGytivwsksvpdveleg.vEfksLPSGihevsedlvyfvheeyyglsaFrqneveeeeernvkmysvGvlvdssnerlskawryaekLk 98 
                 lfli+FD k+Gyti+w++s+p+ve+eg vE+ksLPSG+h+v+ dl+yf+h +y+glsaF++ +v  ee+rn++m++vGvlv+ s e l+++w++ae+Lk
  KHJ30758.1  30 LFLIYFDNKAGYTISWKRSLPGVEVEGvVEYKSLPSGVHSVKRDLIYFIHGDYAGLSAFINAPVA-EESRNARMIAVGVLVPVSGETLGRCWEHAEELK 127
                 7***************************************************************9.999****************************** PP

     DUF2347  99 ellkkllesedntsvLeeyfekeka.kkedeessse..................kksesrerslsdassleteeealssthllssLpelldklGplifp 178
                 e++++l+ ++++t++Le+y+ek+k+ +   ++s  +                   +s++r rslsd++   ++ ++ls +h+++s+ +ll+++Gplifp
  KHJ30758.1 128 EMANNLIDDTKKTQILEDYWEKHKVqTLPLKSSILQlpslsrtgfkslpnsplqARSHHRGRSLSDSQLIHSDMHTLSTHHPAWSMVKLLETFGPLIFP 226
                 **********************99974445555555778**************999******************************************* PP

     DUF2347 179 LykaaLlrkrILllssapveelcslvYllslLssipksleellkse..ssrlrplfnvgvaDipsLekekke....................sgyiAct 255
                 +y+aaLlr+rIL+ ++apv+e+c++vY++s+Ls ip +  ++l++   s+ lrplf++gv+Dip+Le+e ++                     g+iAct
  KHJ30758.1 227 IYRAALLRQRILITTHAPVQETCNFVYDISILSKIPLDGHHILEQYgfSQSLRPLFSIGVQDIPFLEEEFERlktisnapqsrhsnrkdipsRGWIACT 325
                 *********************************************9************************88*************************** PP

     DUF2347 256 tdeiLalkkeLyDvlvklppkssk 279
                 td+iLa+k+ LyDvlvklp+  s+
  KHJ30758.1 326 TDSILAMKHVLYDVLVKLPSPCSS 349
                 *******************97665 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 2.1
     DUF2347 136 sesrerslsdass 148
                 ++s+  + s++s+
  KHJ30758.1 397 KRSSPANYSNESN 409
                 1111222222222 PP

>> DUF4484  Domain of unknown function (DUF4484)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.5   0.1   7.8e-41   3.5e-37       1     210 []     436     616 .]     436     616 .] 0.80

  Alignments for each domain:
  == domain 1  score: 128.5 bits;  conditional E-value: 7.8e-41
     DUF4484   1 vEplsWaalaYsgFiWwASAGekrrgsdeeeeeaqdaaLLadl..apastsvsasslaslaaeeeseereeaeeeeeeeearkelaiiaYFhrLTtqil 97 
                 +Ep+sW+alaYs F WwAS+Ge +++  +e e  +d  LL+d+  +p+   v+ +  +s  +  ++++  e ++++ ++ a+ e  i++YF r+T+qil
  KHJ30758.1 436 IEPVSWSALAYSNFSWWASSGEIKSEIFNESE--SDPLLLSDIslDPQ--LVPSNFRMSPFK--NTDTILEYSRRSPDAPASLEATIVTYFYRMTKQIL 528
                 8*********************9986665555..6*****99633443..222222233333..2333334445556889******************* PP

     DUF4484  98 svladivdssdeekeddeddeeeldeeeedeeeeeeeaeeeeeepLleeaesaeeeeeedevvridsedlaemGLDvwsaaDaaFveelvalyfgRkak 196
                 s+l++i  +s      d ++++                  +e++pL  ++e++e   e+++ + i+ +dl +mGLD ws++D++F+++l+++y gR+  
  KHJ30758.1 529 STLENITITS------DLEEDQ-----------------FDENNPLQGNSENSE--YESRKPIIISRADLVKMGLDLWSDSDHQFIQKLAREYIGRRSL 602
                 ******9777......323222.................26899*999977655..899**************************************** PP

     DUF4484 197 vegkgvevcGvrvc 210
                 +e+ ++++cG+ +c
  KHJ30758.1 603 IESPRFQICGITIC 616
                 *************9 PP

>> SPA  Stabilization of polarity axis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   3.6e-08   0.00016       3     106 ..     212     344 ..     210     349 .. 0.82

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 3.6e-08
         SPA   3 sllkllekftpeiillinalltskriivlstkasadevsefvLalsnlisp.....agdvlrgfknnsfPy..vdlseldalekvpg............ 82 
                 s++klle+f+p i  +  a l+++ri++ + +a+++e ++fv  +s+l +      +   + gf+++ +P   + ++++  le+  +            
  KHJ30758.1 212 SMVKLLETFGPLIFPIYRAALLRQRILITT-HAPVQETCNFVYDISILSKIpldghHILEQYGFSQSLRPLfsIGVQDIPFLEEEFErlktisnapqsr 309
                 689***********************9875.66778***********99987764333344556666688845556666666666666666777888** PP

         SPA  83 ...........yIvGvtNPiFeeqeqlWDvlydld 106
                             I+ +t  i ++++ l+Dvl+ l 
  KHJ30758.1 310 hsnrkdipsrgWIACTTDSILAMKHVLYDVLVKLP 344
                 *******************************9986 PP

>> Avl9  Transport protein Avl9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.024   1.1e+02      40      58 ..      60      78 ..      30      92 .. 0.87
   2 !   10.1   0.0   5.3e-05      0.24     157     223 ..     203     273 ..     135     420 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.024
        Avl9 40 flalpDGsHnfeedfvyFt 58
                + +lp G+H+++ d  yF+
  KHJ30758.1 60 YKSLPSGVHSVKRDLIYFI 78
                6789**************6 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 5.3e-05
        Avl9 157 eesklfvglslrelvlkfrhkvLvlfKlllLekkvlvyg.spveklcelil..sliSLipeliek.lqdsa 223
                 + s+++ + s+ +l+  f   +  ++++ lL +++l+ +  pv+++c++++  s++S ip   ++ l++ +
  KHJ30758.1 203 TLSTHHPAWSMVKLLETFGPLIFPIYRAALLRQRILITThAPVQETCNFVYdiSILSKIPLDGHHiLEQYG 273
                 445588889999*************************9989*******98733677878766666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (616 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 4149.97
//
Query:       KHJ30759.1  [L=326]
Description: putative 66s preribosome component mak16 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.4e-39  134.6   0.6    5.2e-39  133.6   0.6    1.6  1  Ribosomal_L28e  Ribosomal L28e protein family
    4.3e-31  107.5  12.3    4.3e-31  107.5  12.3    2.5  2  Mak16           Mak16 protein C-terminal region
  ------ inclusion threshold ------
      0.089   12.5   1.5       0.14   11.9   1.4    1.5  1  PYC_OADA        Conserved carboxylase domain
       0.15   11.4  14.8       0.19   11.0  14.8    1.1  1  BUD22           BUD22
        4.5    5.7  24.3        5.8    5.4  24.3    1.1  1  TFIIF_alpha     Transcription initiation factor IIF, alpha su


Domain annotation for each model (and alignments):
>> Ribosomal_L28e  Ribosomal L28e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.6   0.6   1.4e-42   5.2e-39       1     114 [.       6     120 ..       6     121 .. 0.94

  Alignments for each domain:
  == domain 1  score: 133.6 bits;  conditional E-value: 1.4e-42
  Ribosomal_L28e   1 LiWelvrnnn..sFlvktrtsnkqtFsrepyNltglhsrkysglanskavtVr..eekkgvvlvtkkkerahkpakawekvklsknsrkalkqia 91 
                     ++W+++ n++  sF+ +t+  ++++F+r++yN+tgl++r++++lans+++tVr  ++++ ++l++k++erah+pak+we++kls+n++kal q++
      KHJ30759.1   6 IVWQVI-NQQfcSFKLRTT--KEKNFCRHEYNVTGLCNRQSCPLANSRYATVRpdPNTGALYLYMKTIERAHTPAKLWERIKLSQNYEKALAQVD 97 
                     59****.888899*99954..5789****************************87779************************************* PP

  Ribosomal_L28e  92 kllkky.rpdlrkaalaRlskitq 114
                     ++l  y +++l++++++Rl+++tq
      KHJ30759.1  98 ERLI-YwPKFLIHKCKQRLTRLTQ 120
                     ***9.55***************98 PP

>> Mak16  Mak16 protein C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.5  12.3   1.2e-34   4.3e-31       2     100 .]     145     257 ..     144     257 .. 0.85
   2 ?   -4.1   5.3         5   1.8e+04      73      73 ..     283     283 ..     259     323 .. 0.46

  Alignments for each domain:
  == domain 1  score: 107.5 bits;  conditional E-value: 1.2e-34
       Mak16   2 kKverRekrReeKAlaAAklekaIekeLleRLksgaYgd.iynveekafkkvlekeee..........eeeeeeeeeeeeeeeeeeeeee..geveyve 87 
                 +Kv+rRe++Re+KA+aAAk+e+aIe+eL+eRL+sgaYgd ++nv+e+++kkvl+  e+          +e  +e+e+eeeee++ee ee+  ge+eyv+
  KHJ30759.1 145 PKVRRREETRERKAEAAAKIERAIERELIERLRSGAYGDqPLNVSESIWKKVLNGLEKagegtrdkdlDEGIDEDEQEEEEEKSEEYEEDgvGEIEYVS 243
                 8*****************************************************99944678999988555555555555545554444478******* PP

       Mak16  88 dee.eeeeledled 100
                 d +  e++l+dled
  KHJ30759.1 244 DIDgVEDDLSDLED 257
                 9977********98 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 5
       Mak16  73 e 73 
                  
  KHJ30759.1 283 G 283
                 1 PP

>> PYC_OADA  Conserved carboxylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.4   3.8e-05      0.14      86     139 ..     175     228 ..     153     318 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.8e-05
                 HHHTTSS---SS---HHHHHHHHT.-----S-GGGG.....---.-HHHHHHHTTTTSS CS
    PYC_OADA  86 dllkGelGkppggfpeelvkkvlkgeepitsrpads.....lepedleklrkeleekak 139
                 +l  G +G  p ++ e ++kkvl+g e+  + ++d+     +++      ++e ee+++
  KHJ30759.1 175 RLRSGAYGDQPLNVSESIWKKVLNGLEKAGEGTRDKdldegIDE-----DEQEEEEEKS 228
                 4557********************76665444444432333333.....3333222221 PP

>> BUD22  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0  14.8   5.4e-05      0.19     108     270 ..     109     304 ..      67     318 .. 0.44

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 5.4e-05
       BUD22 108 envtsrLlnsktvkevveeivesvkkllgiek......kkkkkeeekkkkkkkkkkkkkkeeee................................eee 168
                 ++ ++rL+  ++v+ ++ +  ++ +++lg +       k  ++ee +++k+++++k ++    +                                 e+
  KHJ30759.1 109 HKCKQRLTRLTQVRIRMRRLAKE-DERLGEKLvsklapKVRRREETRERKAEAAAKIER----AierelierlrsgaygdqplnvsesiwkkvlngLEK 202
                 55555666666666555555443.34444333433332222222222222223333333....133458889988888888888888777544433111 PP

       BUD22 169 sdkeeesedsedeekeeseddeeeeeededdedaee..........deedeeaeerelaqydglla......sddededeyneetdeesseesdssdss 251
                 +++   ++d ++          +e+e++e++e++ee           ++d +  e++l+++++ l+        de++d      ++ +see+++ +++
  KHJ30759.1 203 AGEGTRDKDLDE--------GIDEDEQEEEEEKSEEyeedgvgeieYVSDIDGVEDDLSDLEDWLGteekvtTGDEESD------ESCESEEDRGLNTN 287
                 111111111111........11111111111111111111223344445555566666666665554444443333333......22222222222222 PP

       BUD22 252 esasesesessekkkkkkk 270
                  + +++++ +s++  + kk
  KHJ30759.1 288 INGKRKRKVTSKP--RSKK 304
                 2222222222222..1111 PP

>> TFIIF_alpha  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  24.3    0.0016       5.8     181     355 ..     124     312 ..     109     320 .. 0.59

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0016
                  HHXXXXXX.....XXXXXXX....XXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX.....XXXXXXXXX....XXXXXXXX CS
  TFIIF_alpha 181 lkkalkkgeaavgdedeeeek...kkgggGrsk....dLkikdkegddeedsdesdkgdededeek.kkkKk.....kkkaknkkkldddkkkkrgsd 265
                   +++l k+++  g++   +     +++++ r++      ki+   + + ++   s++ +++  +   +  Kk     +k + + ++    k    g d
   KHJ30759.1 124 RMRRLAKEDERLGEKLVSKLApkvRRREETRERkaeaAAKIERAIERELIERLRSGAYGDQPLNVSeSIWKKvlnglEKAGEGTRD----KDLDEGID 217
                  45555555566777654443332544455555445556677777777777777777666665443303345534444444444444....33333444 PP

                  XXXXX.XXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXX..XXX CS
  TFIIF_alpha 266 ddadeydsddGddegr....EldyisDdsasendpeeredkkseEeeekkeieqdedeeekeeekkeeegklskkkkk.akklkkkkkekdkkdS 355
                  +d++e++ ++ ++ +     E  y+sD + +e+d  + ed +  Ee+  + +e+++++ e+ee+   + +   k+k+k + k+++kk+   + + 
   KHJ30759.1 218 EDEQEEEEEKSEEYEEdgvgEIEYVSDIDGVEDDLSDLEDWLGTEEKVTTGDEESDESCESEEDRGLNTNINGKRKRKvTSKPRSKKQSRMEIEY 312
                  44444444444443332224999******************999999998889999999999888666655555554414566666665544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1545  (0.0861732); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 2160.85
//
Query:       KHJ30760.1  [L=276]
Description: putative mfs sugar transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-18   66.6   0.2    1.8e-18   65.8   0.2    1.4  1  Mso1_Sec1_bdg  Sec1-binding region of Mso1


Domain annotation for each model (and alignments):
>> Mso1_Sec1_bdg  Sec1-binding region of Mso1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.8   0.2     1e-22   1.8e-18       1      40 []      19      58 ..      19      58 .. 0.99

  Alignments for each domain:
  == domain 1  score: 65.8 bits;  conditional E-value: 1e-22
  Mso1_Sec1_bdg  1 slsnlslssEkDGdteddTlvhraLvkYYdekgqpfPdWL 40
                   sl++++ls+E DG+teddT+++r+L+ YY+e  +pfP+WL
     KHJ30760.1 19 SLRQNLLSTEDDGETEDDTHLCRVLRSYYTENDRPFPAWL 58
                   79*************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      228  (0.0127168); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 1899.20
//
Query:       KHJ30761.1  [L=261]
Description: putative u4 tri-snrnp-associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-26   92.0   2.5    1.8e-26   92.0   2.5    2.5  3  SNRNP27    U4/U6.U5 small nuclear ribonucleoproteins


Domain annotation for each model (and alignments):
>> SNRNP27  U4/U6.U5 small nuclear ribonucleoproteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1      0.27   4.8e+03      20      37 ..     100     117 ..      93     119 .. 0.70
   2 ?   -2.6   0.0      0.33   5.9e+03      12      30 ..     170     188 ..     166     196 .. 0.52
   3 !   92.0   2.5     1e-30   1.8e-26       5      55 ..     206     256 ..     202     257 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.27
     SNRNP27  20 gkkvegnnegavkkkkkr 37 
                  +++e+n+    +k+kkr
  KHJ30761.1 100 SQHHEKNSPNEREKDKKR 117
                 467777777777777777 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.33
     SNRNP27  12 fggFdtTkgkkvegnnega 30 
                 + g ++ k k+   +++ a
  KHJ30761.1 170 IDGDNSKKIKNSRSAKNKA 188
                 5555555555554444444 PP

  == domain 3  score: 92.0 bits;  conditional E-value: 1e-30
     SNRNP27   5 emmklmGfggFdtTkgkkvegnnegavkkkkkrkyRQYMNRkgGFNRpLdk 55 
                 +m+ +mGf++F+tT++kkv+gnn++av+k+kk++yRQYMNR gGFNRpL++
  KHJ30761.1 206 MMKTMMGFSNFGTTHQKKVPGNNVSAVRKEKKTEYRQYMNRVGGFNRPLSP 256
                 7999*********************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1303  (0.0726756); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 1817.66
//
Query:       KHJ30762.1  [L=214]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.042   12.6   0.6      0.047   12.4   0.6    1.1  1  Prismane  Prismane/CO dehydrogenase family
        0.6   10.5   6.2          2    8.8   0.4    2.4  2  eIF3g     Eukaryotic translation initiation factor 3 subunit 


Domain annotation for each model (and alignments):
>> Prismane  Prismane/CO dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.6   5.2e-06     0.047       2     110 ..      64     174 ..      63     213 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.2e-06
                 EE-SST....CT-ECSCS.SS-TTS-BHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHTSTTTB-SHHHHHHHHHHHHCHHHCCSSHHHHHH CS
                 xxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    Prismane   2 fCrqCe....ngpCritknkrGvCGkdadtavardlliavlkgaaahaahareladtliakalfktltnvnfddekklkrlaealgieeelkdieelaa 96 
                 fC+ C+     + C+   ++rG CG +++t+++    +++      h    r+ + + +  + +++ +++++ +++  ++ ++a+  +++l++  e++a
  KHJ30762.1  64 FCKRCNghhfSKFCSRA-PSRGNCGSNMHTQDVFIAATQCRNCGGPHRSDSRKCLARPTRHGAQTK-EQLKVYRQAGDREYQAAVRARAALEKAPEMEA 160
                 8*****99988999999.***************999999999999999999999777777777666.89999999999999999999999999999998 PP

                 HHCCHHHCGGGS-S CS
                 xxxxxxxxxxxxxx RF
    Prismane  97 kvaevaledlskee 110
                  + + ++++l  e 
  KHJ30762.1 161 LIGNSVYGNLVPEV 174
                 88888888877554 PP

>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.4   0.00023         2     101     119 ..      59      77 ..      48      81 .. 0.80
   2 ?    4.1   0.9    0.0062        56     105     115 ..     100     110 ..      86     121 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00023
       eIF3g 101 ekklvkCriCkgdHfTskC 119
                 ++ +  C+ C+g+Hf+  C
  KHJ30762.1  59 QTPIEFCKRCNGHHFSKFC 77 
                 455678**********999 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.0062
       eIF3g 105 vkCriCkgdHf 115
                  +Cr+C+g H 
  KHJ30762.1 100 TQCRNCGGPHR 110
                 69********5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1557.68
//
Query:       KHJ30763.1  [L=129]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   12.4   0.3        8.4    6.4   0.0    2.0  2  DUF1451   Zinc-ribbon containing domain


Domain annotation for each model (and alignments):
>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0   0.00047       8.4      23      67 ..      22      66 ..      15      78 .. 0.79
   2 ?    4.3   0.1     0.002        37      27      53 ..      81     107 ..      74     116 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.00047
     DUF1451 23 eklseaeeltkeelelvaeylkrDleeaarsleeskeeleewlsl 67
                + +++a++l +++  ++ +yl +D++e+ ++ + +++ ++   s+
  KHJ30763.1 22 TITNQASQLLEDDSGQMYSYLPKDIREIIEQRRRRERAWHVRPSI 66
                45678999*********************9999888865555555 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.002
     DUF1451  27 eaeeltkeelelvaeylkrDleeaars 53 
                  +++++k e++lv++yl++ ++ +a+s
  KHJ30763.1  81 YKNDIEKVEADLVRNYLQQAIALLAAS 107
                 578999************998877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       917  (0.0511462); expected 358.6 (0.02)
Passed bias filter:                      680  (0.0379274); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 957.96
//
Query:       KHJ30764.1  [L=210]
Description: putative glycolipid transfer protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-45  155.5   0.0    1.6e-45  155.1   0.0    1.2  1  GLTP      Glycolipid transfer protein (GLTP)


Domain annotation for each model (and alignments):
>> GLTP  Glycolipid transfer protein (GLTP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.1   0.0   8.8e-50   1.6e-45       2     148 ..      38     175 ..      37     176 .. 0.96

  Alignments for each domain:
  == domain 1  score: 155.1 bits;  conditional E-value: 8.8e-50
                 BHHHHHHHHHHHHHHHHHT-G.GGGGHHHHTHHHHHHHHHHTT....T-SBHHHHHHHHHHTT-TT..STT-HHHHHHHHHHHHHHHHHHHHHHH.... CS
        GLTP   2 eteeFleacrelvklfdllGs.afsfvksDvegniekleeaykknpeeystleslveaEkeeglakkkkkesatrallwLkRgLeflaeflekllkdpk 99 
                 + +eFlea+++++ lfd lGs af++vk+D+ gni+k++++ ++ p+e+ +l++lv +E+++      kk++a+++llwL+RgLef+a++l +++++p+
  KHJ30764.1  38 SSTEFLEAAESMTALFDILGSlAFQPVKKDILGNIKKIRDRQLAAPAESLSLQELVINELKT------KKHTASEGLLWLTRGLEFTAAALAQNVAHPN 130
                 6789*******************************************************964......3899*************************** PP

                 HTB-...HHHHHHHHHHHTGGGS-HHHHHHHHHHGGG--BHHHHHHHTT CS
        GLTP 100 essreelselatkAYektLakyHgwlvrkaaklamkalPsrkdflkklg 148
                     eels++++ AY +tL+++H+++v++++++am+a+P+rkdf+ klg
  KHJ30764.1 131 ----EELSVSFRGAYAETLKPHHSFVVKPIFSAAMSACPYRKDFYDKLG 175
                 ....9******************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       634  (0.0353617); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 1625.60
//
Query:       KHJ30765.1  [L=435]
Description: putative duf890 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-63  215.5   0.0    2.1e-63  214.5   0.0    1.5  1  Methyltransf_10  RNA methyltransferase
    9.7e-06   25.2   0.0    2.1e-05   24.2   0.0    1.5  1  MTS              Methyltransferase small domain
     0.0001   21.8   0.0    0.00017   21.1   0.0    1.3  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
    0.00016   21.5   0.0     0.0038   17.0   0.0    2.3  2  Methyltransf_31  Methyltransferase domain
      0.002   18.7   0.0       0.01   16.5   0.0    2.1  2  Methyltransf_11  Methyltransferase domain
     0.0021   18.7   0.0      0.006   17.3   0.0    1.8  1  Methyltransf_25  Methyltransferase domain
  ------ inclusion threshold ------
      0.068   13.9   0.0       0.58   10.9   0.0    2.3  2  Methyltransf_12  Methyltransferase domain
      0.081   12.9   0.0       0.15   12.0   0.0    1.4  1  Methyltransf_18  Methyltransferase domain
       0.15   11.5   0.0        0.3   10.5   0.0    1.4  1  AviRa            RRNA methyltransferase AviRa
       0.16   11.6   0.0       0.33   10.6   0.0    1.4  1  UPF0020          Putative RNA methylase family UPF0020


Domain annotation for each model (and alignments):
>> Methyltransf_10  RNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.5   0.0   1.2e-66   2.1e-63      11     299 .]       6     295 ..       2     295 .. 0.86

  Alignments for each domain:
  == domain 1  score: 214.5 bits;  conditional E-value: 1.2e-66
                      XTTTTSXXHHHHHHHXHHHHTTXEEXTTSXEES-TTSHHHHHHHHHHHHHHHH----.---TTS----HHHHHHHHHHHHHHHTGGGSG..... CS
  Methyltransf_10  11 nrhkdkydfaalikvvPelkqfvilnpkGrvsidfadPlavkalnkallrefygvsewdiPdgfliPpvPgradyihyvadllgkadsd..... 99 
                      n ++d  +f+ l+    e+ +f+  +p+G+  +df dP av+ l+k+ll++++gvs   +P+++l+PpvP r++yi +++ ll  +ds      
       KHJ30765.1   6 NIYQDGINFSSLALIDSEFAKFL--KPNGQ--LDFSDPNAVQQLTKSLLKRDFGVSV-ILPQDRLCPPVPNRLNYILWIQRLLDTTDSAsfidf 94 
                      78999999*************97..57887..8***********************9.89***********************98776432112 PP

                      TTS..........--EEEEES-TTTTHHHHHHHHH.H--EEEEEES-HHHHHHHHHHHHHT.T-TTTEEEEE--.TT-SC.CHHSSTTSS-EEE CS
  Methyltransf_10 100 isa..........qvraldiGvGanCiyPllGvte.yGWrfvgsevddvslasakaivesnsklsdaiklrkqk.ekkai.fdglieenerydv 180
                      +s+           v++ldiG+Ga CiyP+lG  +   W+ vg+++dd+sl++a+++v++n +l d i + k + ++  i f++l    ++ ++
       KHJ30765.1  95 KSTnenryesknsVVSGLDIGTGAGCIYPILGCVLrSHWKLVGTDIDDKSLEYARQNVSTN-HLGDRISIIKTEpQSPLIpFQALG--LDHLNF 185
                      22244455555556899***************875267***********************.9******98875155555556654..567899 PP

                      EEE-S---SS------------...---.....---------TTTSHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEESSGGGHHHHHHHHHHTT CS
  Methyltransf_10 181 tlCnPPfhaslaeakagserklknlgkanktralpslnfgGqkaelyceGGevafikklieeskqlakqvlWfttlvskkenlaplkeelkklG 274
                      t+CnPPf++s +e  +++e k+    k      +p    +G   e++ eGGevafi++li+es +l+ +v W+t++ +k ++l +l+++l +lG
       KHJ30765.1 186 TMCNPPFYESREEMIRSAEVKK----K------PPFTACTGADFEMIIEGGEVAFISQLIDESLKLKSRVQWYTSMTGKLSSLITLRDKLVSLG 269
                      **********999988877776....3......578899******************************************************* PP

                      -SEEEEEEEEETTE.EEEEEEEES-- CS
  Methyltransf_10 275 askvtvvelaqGqk.lsrfiaWsfld 299
                      +++   ++++qG+k  +++iaWsf d
       KHJ30765.1 270 INNFALTDFVQGNKtKRWAIAWSFDD 295
                      ************872579******76 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   1.2e-08   2.1e-05      35     113 ..     111     198 ..      96     206 .. 0.77

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1.2e-08
                 EEEET-TTSHHHHHHHH.HTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTT......TSTTS-EEEEEE---STTTCHC CS
         MTS  35 vlDlGcGaGvlgaalak.espeaevtlvdvdarAlesakenleankle..vevvasdvle......eveekkfdlivsNPPfhagkat 113
                  lD+G+GaG +   l     ++ +++ +d+d ++le a++n+++n+l   +++++++  +      ++  +++++ ++NPPf +++++
  KHJ30765.1 111 GLDIGTGAGCIYPILGCvLRSHWKLVGTDIDDKSLEYARQNVSTNHLGdrISIIKTEPQSplipfqALGLDHLNFTMCNPPFYESREE 198
                 69*******998777651556778**********************998977777776541111114556899*********999874 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   9.7e-08   0.00017     164     216 ..     110     164 ..      97     175 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 9.7e-08
        PrmA 164 evlDvGtGSGiL.ai.aaakLgakkvvavDiDevAvkvakeNaelNkveakleva 216
                 + lD+GtG+G +  i + ++  + k v++DiD+ +++ a++N++ N++ ++++++
  KHJ30765.1 110 SGLDIGTGAGCIyPIlGCVLRSHWKLVGTDIDDKSLEYARQNVSTNHLGDRISII 164
                 347******955255155666788*************************999774 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0       0.1   1.8e+02      95     123 ..      22      50 ..       2      66 .. 0.76
   2 !   17.0   0.0   2.1e-06    0.0038       6      53 ..     110     157 ..     105     181 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.1
  Methyltransf_31  95 eeiervlkpggilliedprllaelpakve 123
                       e  + lkp+g l  +dp++ ++l +++ 
       KHJ30765.1  22 SEFAKFLKPNGQLDFSDPNAVQQLTKSLL 50 
                      48899**************8888876655 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 2.1e-06
  Methyltransf_31   6 rvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgl 53 
                      + lD+G+G+G +   l   l+++ ++vG Di+ +++e+Ar+n + + l
       KHJ30765.1 110 SGLDIGTGAGCIYPILGCVLRSHWKLVGTDIDDKSLEYARQNVSTNHL 157
                      559*************9999*********************9877655 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       3.6   6.5e+03      83      94 ..      23      34 ..      18      35 .. 0.87
   2 !   16.5   0.0   5.7e-06      0.01       1      57 [.     112     175 ..     112     188 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 3.6
                     HHHHHEEEEEEE CS
  Methyltransf_11 83 eiaRvLkpgGll 94
                     e+a+ Lkp+G l
       KHJ30765.1 23 EFAKFLKPNGQL 34
                     89999*****76 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 5.7e-06
                      EEET-TTSHHHHHHH...HTTSEEEEEES-HHHHHHHHHHCCHHT-..EEEETTEECCC..TSS CS
  Methyltransf_11   1 LdvGcGtGrlaeala...krgarvvgvDlskemlklakekaseegl..kvefvvadaek..lpf 57 
                      Ld+G+G+G +   l    +   ++vg+D++++ l++a++++s+++l  ++++++ + ++  +pf
       KHJ30765.1 112 LDIGTGAGCIYPILGcvlRSHWKLVGTDIDDKSLEYARQNVSTNHLgdRISIIKTEPQSplIPF 175
                      8**************876666***********************99988888877766553355 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   3.3e-06     0.006       2      61 ..     112     176 ..     112     204 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 3.3e-06
                      EEET-TTSHHHHHHHCTS.TSSEEEEEESSHHHHHHHHHHHHHTTT..TEEEEESBCCG..BSSS CS
  Methyltransf_25   2 LdlGcGtGrltlalakrl.gkakvtgvDiseemleaareraeeegl..nvefvqgdaed..lpfe 61 
                      Ld+G+G G +   l   l ++ k++g+Di+++ le+ar++++ ++l  ++++++ + ++  +pf+
       KHJ30765.1 112 LDIGTGAGCIYPILGCVLrSHWKLVGTDIDDKSLEYARQNVSTNHLgdRISIIKTEPQSplIPFQ 176
                      8*******8776665555447********************999888899988877766545555 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0       1.1   1.9e+03      88      99 .]      23      34 ..      18      34 .. 0.86
   2 ?   10.9   0.0   0.00032      0.58       1      45 [.     112     157 ..     112     170 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1.1
  Methyltransf_12 88 nirklLkpgGrl 99
                     +++k Lkp+G+l
       KHJ30765.1 23 EFAKFLKPNGQL 34
                     57899*****97 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00032
  Methyltransf_12   1 LeiGcGtGsllrallekl.pdieytgvDispsaiedakeklakren 45 
                      L+iG+G G +   l   l ++++++g+Di+ +++e a++  + ++ 
       KHJ30765.1 112 LDIGTGAGCIYPILGCVLrSHWKLVGTDIDDKSLEYARQNVSTNHL 157
                      8*******887777776699***************99999988765 PP

>> Methyltransf_18  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   8.4e-05      0.15      19      71 ..     112     165 ..     102     173 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 8.4e-05
  Methyltransf_18  19 aDiGtDHgyl.piylvkegkakkviasDinegplekakeniekagledkievrl 71 
                      +DiGt  g + pi  +  +   k + +Di +++le a++n+++++l d+i+++ 
       KHJ30765.1 112 LDIGTGAGCIyPILGCVLRSHWKLVGTDIDDKSLEYARQNVSTNHLGDRISIIK 165
                      799999998845666677777899**************************9875 PP

>> AviRa  RRNA methyltransferase AviRa
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00017       0.3      55     100 ..     109     153 ..      89     166 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00017
       AviRa  55 ltlyDpCCGgayLltvlgllhgkkikkvlasDvdeevlelakkNLs 100
                 ++  D   G++ +  +lg + +++  k++++D+d++ le+a++N+s
  KHJ30765.1 109 VSGLDIGTGAGCIYPILGCVLRSHW-KLVGTDIDDKSLEYARQNVS 153
                 5556777888999999998887775.799***************96 PP

>> UPF0020  Putative RNA methylase family UPF0020
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00018      0.33      76     134 ..     132     195 ..     127     206 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00018
                 H--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG.--....STTS---EEEE------- CS
     UPF0020  76 elklygsDldrrvvqgareNaekagvgdliefsqadaak.Lr....lkegevdvivtnpPYGer 134
                 + kl+g D+d + ++ ar+N +   +gd+i++ + + ++ L     l  +  +   +npP+ e+
  KHJ30765.1 132 HWKLVGTDIDDKSLEYARQNVSTNHLGDRISIIKTEPQSpLIpfqaLGLDHLNFTMCNPPFYES 195
                 5679***************************998775532222434333456677888887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       323  (0.0180155); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3464.52
//
Query:       KHJ30766.1  [L=388]
Description: hypothetical protein EV44_g5224 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       548  (0.030565); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2818.37
//
Query:       KHJ30767.1  [L=773]
Description: putative spc97 spc98 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-28   99.9   0.3      2e-28   99.9   0.3    1.6  2  GCP_N_terminal  Gamma tubulin complex component N-terminal
      4e-21   75.8   9.2    1.1e-20   74.4   9.2    1.7  1  GCP_C_terminal  Gamma tubulin complex component C-terminal
  ------ inclusion threshold ------
       0.02   14.6   0.0      0.046   13.3   0.0    1.6  1  DUF3444         Domain of unknown function (DUF3444)


Domain annotation for each model (and alignments):
>> GCP_N_terminal  Gamma tubulin complex component N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.9   0.3   3.3e-32     2e-28       1     303 [.       2     300 ..       2     302 .. 0.85
   2 ?   -2.7   0.1      0.57   3.4e+03      46      98 ..     584     640 ..     567     653 .. 0.65

  Alignments for each domain:
  == domain 1  score: 99.9 bits;  conditional E-value: 3.3e-32
  GCP_N_terminal   1 lrdllylLqGisgklirfdekddervvkdvrlpgllppslrslverllelgtlyrrlrkfveevsrsesglvlqalaaald.eelteyyrliaql 94 
                     l+++l+ L+G+s+ l++ ++  +       + +++l+p++++l+ ++++l +l+++l + +++ ++ + + ++qa+a a++ ++l+ ++r + ++
      KHJ30767.1   2 LHEILLSLSGHSSPLLN-ND-YS-------SPSSILSPPEKELLATIASLSNLHCKLLAQTSHITATHDSSICQAVATAVRtKYLSKFQRKVLEV 87 
                     79**************6.44.22.......336679*********************************************666*********** PP

  GCP_N_terminal  95 Esqlledsesi.........ltLlrlevwlqetllllrvLanlveeve.........kanlkggallsllheaaqhgdpkvrkllsellervsrp 171
                     E  ll+d +++         + L  l+ ++  +++ +++L++ +e +          ++++ g+ ++++l  + q+g   +++++ +l++++   
      KHJ30767.1  88 EDSLLNDYNGNdnstrvynsIPLTALVGKFSGWTRVMQWLLQTTEFIScgggnlqtnTNKCSGAMIIDYLRGEIQTGYLDIEEAALSLIKAAETA 182
                     ********999**********************************99989999988877888********************************* PP

  GCP_N_terminal 172 flemlekWileGelsDpy.nEfFveenesvakeklkeddseklweekYtlrkemlPsflseelaekIletGkslnflres......cgdsew... 256
                     +l++l++W+l+G+l     ++fFv++  ++           +l  ++++++k+ lP f+s + a  Il++G+sln + +       +        
      KHJ30767.1 183 WLKQLSSWVLYGRLPSFGrDDFFVQTVVDK-----------NL--QEFEIKKNLLPAFISDSTAGTILFIGRSLNHIWAKrslgtkS----Pelh 260
                     **************5333499***554333...........33..59***************************9987753332211....1112 PP

  GCP_N_terminal 257 .iekteseekeleyiddleelssslslsleelidsayklaskrllelL 303
                      ++ t     +l+ i +l+  + ++ ++++++i+s++   s+  l+ L
      KHJ30767.1 261 lLP-T-----HLQQISSLN--FPISCANFSRVISSIRLSLSQNILKCL 300
                     222.2.....234444444..6677889*************9999877 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.57
  GCP_N_terminal  46 rllelgtlyrrlrkfveev....srsesglvlqalaaaldeelteyyrliaqlEsql 98 
                     ++l++g ++++l++  +++     ++ + ++l+ la++l   ++++   +++l +q+
      KHJ30767.1 584 NYLQVGENLKSLSSGKQSYdpqsLADAHQRYLSTLASSLLLNISAFTHPLYHLLQQI 640
                     566777777777777766666665555566666666666555555555555555554 PP

>> GCP_C_terminal  Gamma tubulin complex component C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.4   9.2   1.8e-24   1.1e-20       5     309 .]     310     749 ..     308     749 .. 0.74

  Alignments for each domain:
  == domain 1  score: 74.4 bits;  conditional E-value: 1.8e-24
  GCP_C_terminal   5 LkllkrylLlgqgdFisrLldalfdel..............................................wkpasselrlaL.tslLeeair 52 
                     L+ll++++Llg+g+F++ L++ + +++                                              +++++++  l+L + l++++i 
      KHJ30767.1 310 LTLLREIFLLGRGEFAVALVTEADERMrsrwrqsqnlgldnrdnninilpkegevsavlaktwaalsamqgqhDENVEEDEILELaRDLMQLTIL 404
                     899***************************************99999999999999888888888888888776666665555542567777777 PP

  GCP_C_terminal  53 ssnaqqsdelkddlsfaldlpevleeldakldpdslegldfltLeYkvpwplslvitpealekYqriFrfLlrvkrvefalsslw....krrkat 143
                     + +a+       + +f+ ++ e+ ++++ +   ++l      +L+ ++p+pl+l +tp+ ++ Y  i ++Ll ++r++ +l++lw    +rr+  
      KHJ30767.1 405 KPSASM------NHHFKSNTMEIYSKIS-STPFKNLLLSVPTSLTMNIPSPLDLFLTPADIQVYSCINSYLLSIRRAHLRLTDLWkitaMRRQHP 492
                     776544......2334444444444444.22222233444568999***************************************8776444433 PP

  GCP_C_terminal 144 ...garsvl.........................lkrarllrqemlhfvsqlqyYvldeviessWreleeklkke.................... 190
                        +    +                         +++++++ + +l f+s+ ++Y++ ev++s W  ++e+++++                    
      KHJ30767.1 493 vslN----KksrnttasahltrmhrkkinerfltMRSVWATSSAALFFLSETEAYFQAEVVQSIWIGFKEWVNSDiepsafnqssslnrfdvied 583
                     2221....034456677888899999999888888888**********************************77789*******99999999999 PP

  GCP_C_terminal 191 .................atdldelieaHeafLdsilkkclLrskk......kllklleeilelileFakvldgly.lsvselt.......aeeae 254
                                      + d+++l +aH+++L+++ +++lL+ +       +ll+++++++ l+++  ++ ++l  ++ ++         +    
      KHJ30767.1 584 nylqvgenlkslssgkqSYDPQSLADAHQRYLSTLASSLLLNISAfthplyHLLQQIDHLVALVHRIYSIWQSLDlEADEG-IvdafsdfQ---- 673
                     99999999888877766559*********************9994556776777777777777777777777765333333.254443330.... PP

  GCP_C_terminal 255 eeeleekleerleelekeFrkkvslll.kvlralkeqe.............ede..........dlrqLllrLdfnefY 309
                       + e++++++l  ++++ ++ ++ l+ + lr++++ +             + e           +++Ll++Ldf +++
      KHJ30767.1 674 --REEKDVKAQLLLVATKVKNGIENLIiNGLRNIEQGQatwddaftevapfQ-EsqnyvpakvnRIDRLLMKLDFGGWF 749
                     ..33334556666666666666665531445555333345544444444331.044555666669**********9997 PP

>> DUF3444  Domain of unknown function (DUF3444)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   7.8e-06     0.046      77     189 ..     315     426 ..     273     438 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 7.8e-06
     DUF3444  77 kglpvscGtFklgkse....tvkevniFShlvkaeklgkk.keyeilPkkGevWalYknwseewssdadkkrkeeyeivevlsdtseeagvkvalLekv 170
                 + +  + G+F +   +     ++++   S+++  ++   + ++++ilPk+Gev a+  +  +  s+ + ++  e+ e  e+l+   +   ++ ++L+  
  KHJ30767.1 315 EIFLLGRGEFAVALVTeadeRMRSRWRQSQNLGLDN---RdNNINILPKEGEVSAVLAKTWAALSAMQGQHD-ENVEEDEILELARD--LMQLTILKPS 407
                 556677788886322212223333334444444444...2368***********998664444664444444.56777777777765..7889999999 PP

     DUF3444 171 kgfksvFkreekegseail 189
                 + +++ Fk+++ e  ++i 
  KHJ30767.1 408 ASMNHHFKSNTMEIYSKIS 426
                 9999999998876555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (773 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       629  (0.0350828); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.26s 00:00:00.93 Elapsed: 00:00:00.42
# Mc/sec: 5530.15
//
Query:       KHJ30768.1  [L=228]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1858.29
//
Query:       KHJ30769.1  [L=494]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.043   13.9   1.6      0.076   13.1   1.6    1.4  1  ArfGap    Putative GTPase activating protein for Arf


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.6   4.3e-06     0.076       5      99 ..     369     463 ..     365     474 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.3e-06
                 HHHCCSCCCCB-TTT-SBS-.-EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG-TTCGHHH CS
      ArfGap   5 kellkepenkvCaDCgakep.tWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekrskssskek 99 
                 +++ k++  ++C  C+ ++p + +s +  +  C +C g Hrs  ++  + r ++    ++e+l++ ++ g+++ +++  ak  +e   s+++++++
  KHJ30769.1 369 RKFKKQQPLEFCKRCNGHHPtKNCSRAPSCGNCGNCGGPHRSD-SRRCFARPTRSGAPTKEQLKIYRQAGEREYQAVIRAKAAEELAASANTNNTE 463
                 66777888899****88777367888999*************8.788899******************************9988777755555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       722  (0.04027); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.36
# Mc/sec: 4078.28
//
Query:       KHJ30770.1  [L=1393]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-15   57.7   0.0    4.9e-15   55.8   0.0    2.0  1  Helicase_C   Helicase conserved C-terminal domain
    2.1e-15   56.9   0.0    7.7e-15   55.1   0.0    2.0  1  HA2          Helicase associated domain (HA2)
    1.1e-13   51.4   0.0    2.5e-13   50.2   0.0    1.7  1  OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fol
    1.7e-09   37.7   0.5    4.2e-09   36.4   0.5    1.6  1  DEAD         DEAD/DEAH box helicase
    2.3e-08   34.3   0.3    6.1e-08   33.0   0.3    1.8  1  RWD          RWD domain
    1.8e-06   28.3   0.7    2.2e-05   24.7   0.5    2.6  2  AAA_22       AAA domain
     0.0071   16.6   0.1       0.04   14.2   0.1    2.3  2  DND1_DSRM    double strand RNA binding domain from DEAD END P
     0.0071   16.5   0.0      0.023   14.9   0.0    1.8  1  dsRBD2       Double-stranded RNA binding domain 2
     0.0072   16.3   0.2      0.036   14.1   0.0    2.3  2  ResIII       Type III restriction enzyme, res subunit
     0.0088   15.4   0.4      0.035   13.4   0.4    2.1  1  ATPase       KaiC
  ------ inclusion threshold ------
      0.015   15.7   0.1        6.1    7.3   0.0    2.9  2  AAA_17       AAA domain
       0.03   13.4   0.0      0.066   12.3   0.0    1.5  1  T2SSE        Type II/IV secretion system protein
      0.034   13.9   0.0      0.075   12.8   0.0    1.5  1  AAA_29       P-loop containing region of AAA domain
      0.037   13.8   0.3       0.32   10.7   0.2    2.2  2  IstB_IS21    IstB-like ATP binding protein
       0.11   12.6   0.1        3.8    7.6   0.0    2.4  2  ADK          Adenylate kinase
       0.33   11.4   0.1       0.33   11.4   0.1    3.0  4  AAA_23       AAA domain


Domain annotation for each model (and alignments):
>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.8   0.0   4.4e-18   4.9e-15       6     110 ..     854     977 ..     849     978 .. 0.91

  Alignments for each domain:
  == domain 1  score: 55.8 bits;  conditional E-value: 4.4e-18
                 HHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSH...... CS
  Helicase_C   6 llellkleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnv...... 97 
                 + ++l+  ++++ ilifv+ +++++k +++l++  ++++++lh++l++ e+++++     g+++v+++t++ae++i+i+++  Vi+ +  +++      
  KHJ30770.1 854 IDAELSCLKQNYGILIFVPGVSEINKvLDYLRHIPNLHALPLHASLQSIEQRKVFPHAPPGKRKVIVSTNIAETSITIDDIVAVIDTGRVKETsydakn 952
                 5556666789999***********99999996666*****************************************************99777778899 PP

                 ............HHHHHHHTTSSST CS
  Helicase_C  98 ............tsyiqriGRtgRa 110
                             + ++qr+GR+gR+
  KHJ30770.1 953 qvqrlqeiwasrAACKQRRGRAGRV 977
                 999999999999************7 PP

>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.1   0.0   6.9e-18   7.7e-15       1      76 [.    1042    1114 ..    1042    1160 .. 0.80

  Alignments for each domain:
  == domain 1  score: 55.1 bits;  conditional E-value: 6.9e-18
         HA2    1 AlelLvalgALdeegnlTelGrkmaelPlsprlakmLlaaaeleegcldevitivAalsveeifleeneeekeeee 76  
                  A++ L ++gALd   +lT+lG +++++P + r++k+++++a +  gcld ++ti+A+l+++++f+++ +e++e   
  KHJ30770.1 1042 AIKILRRIGALD-GDELTALGLHLSMIPADLRCGKLMVYGAMF--GCLDACVTIAAILTTKSPFISPFHEKNEMGL 1114
                  7899*******8.59*************************777..**********************987765544 PP

>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.0   2.2e-16   2.5e-13       2      83 .]    1208    1308 ..    1206    1308 .. 0.79

  Alignments for each domain:
  == domain 1  score: 50.2 bits;  conditional E-value: 2.2e-16
                   HHHHHHHHTTCEEE.................EEETTCCEEETT.TCEEEEE-TTSTTTT.T...TSSSEEEEEEEEESSSEEEEEEEEE-HHHHHH CS
  OB_NTP_bind    2 raillaGlypqiar.................kdpskkdyktar.tktrvfihpsSvlak.nekekepewvvytelvettklylrdltaidpawLll 78  
                   r + + ++ pq+ar                  d + k+ k    ++ rvfihpsS+l++ ++    +++++y  ++ t+k ++rdlt+ +++++ll
   KHJ30770.1 1208 RSLCAGAFNPQVARisfpeqkfapsysgtvaLDHEAKTIKYFNeENGRVFIHPSSTLFRaQSFPGHSNYIAYFRKLATSKIFIRDLTPFNAYSALL 1303
                   4455566889***66666666666666655555566665555446*************9888888899**************************** PP

                   HSTTT CS
  OB_NTP_bind   79 fagqi 83  
                   f+g i
   KHJ30770.1 1304 FSGPI 1308
                   *9975 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.5   3.8e-12   4.2e-09       6     170 ..     608     768 ..     604     774 .. 0.79

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 3.8e-12
                 HHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHH.HHHTTTSTSEEEEEETTSSHHHHHHHHH...TT..C CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx...xx..x RF
        DEAD   6 eaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnl.kkfkkyidlrvlliiggvaardqlskld...ng..v 98 
                  +i+ i   +  ++++eTGsGK++  +  +l+  ye++  + +++++  P r  a   ++++ +++++ ++ +v  ii g+++ +q++k++    g  +
  KHJ30770.1 608 TIIDSISLHQVTIISGETGSGKSTQCAQFILDDRYEKNLGECTQIICTQPRRISAISLADRVsEERCSAVGQEVGYIIRGESKISQKTKIKfvtTGvlL 706
                 5677777788899***********************9888888******************94456666998888*****9999999999542222444 PP

                 SEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  99 divvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp 170
                 + +    g ldd++     ++ +++ +++DE+++ + +   df+  +l+ + ++ +d k    +i++SATl 
  KHJ30770.1 707 RKLQNSGGSLDDVVA----STVDISHIIIDEVHERSLD--TDFLLVLLRDMMRKRKDLK----LILMSATLD 768
                 444455588888773....25578889******97776..7888888888866666655....*******97 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.3   5.4e-11   6.1e-08       2     116 .]     428     529 ..     427     529 .. 0.86

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 5.4e-11
                 HHHHHHHHHHHHSTTTCCCCHT--EE--S-EEEEEEECECCCC....TT-CEEEEEEEEE-SSTTSS--EEEEEECCSS-HHHHHHHHHHHHHHHHHT. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
         RWD   2 eqeqEleaLesIypdefevienenysikleikikldededeedsefeekkkpslkleiklpeeYPeeaPiislsstenlpkeqvksleekleelaeen. 99 
                  +e+E+++L ++ ++ f+++ ++  +    i+++++++++            ++ +  + +++YP  aPiis+ +   lp++ ++s++++   ++ en 
  KHJ30770.1 428 IWEEEISSLHAVLGNRFKKLGKDLCE----IQLSPEPEKNIT--------AMKVIMRLRKSQNYPFHAPIISICAD--LPAYIRLSITKQTLIYLTENl 512
                 589*****************977666....888888887763........5677777777779*********9654..6*******9999999999999 PP

                 TTS--CHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxx RF
         RWD 100 lgepvifalidwlkenl 116
                 lge++++  idw+++nl
  KHJ30770.1 513 LGEQMLYFSIDWVEQNL 529
                 *************9986 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0         1   1.1e+03      91     127 ..     287     335 ..     252     341 .. 0.63
   2 !   24.7   0.5     2e-08   2.2e-05       6     128 ..     617     763 ..     613     769 .. 0.70

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 1
      AAA_22  91 v...........ielliiDEaqhlr.s....eealeeLrsllnlsrkgvqliL 127
                 +           ++ l iDE+ +l  +    eea++e+++    ++ ++ ++L
  KHJ30770.1 287 TwnpngkklsksQQNLTIDEFKKLGfRqshiEEAISECKD----REESLEWLL 335
                 33333334455778899******97742234333333333....444555555 PP

  == domain 2  score: 24.7 bits;  conditional E-value: 2e-08
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeakaee.......erpevvfvtlpsst..sskdl.lrellralglelka..............erlsseelle 80 
                 +++++ Ge+G+GK+t ++++   +  ++k                  ++   +  s++d   +e ++a+g+e  +              +  ++  ll+
  KHJ30770.1 617 QVTIISGETGSGKSTQCAQFILDDR-YEKNLGectqiicT-------QPRRISaiSLADRvSEERCSAVGQEVGYiirgeskisqktkiKFVTTGVLLR 707
                 789*******************974.44333325555552.......3333333333332234444444444444555588889888886777777777 PP

      AAA_22  81 aleqalrarav.......ielliiDEaqhlr..seealeeLrsllnlsrkgvqliLv 128
                 +l++   + ++       i+ +iiDE++  +  ++ +l  Lr+++  +rk+++liL+
  KHJ30770.1 708 KLQNSGGSLDDvvastvdISHIIIDEVHERSldTDFLLVLLRDMMR-KRKDLKLILM 763
                 777777777778888889**********963335999999999999.9*******97 PP

>> DND1_DSRM  double strand RNA binding domain from DEAD END PROTEIN 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.1   3.6e-05      0.04       3      28 ..      86     112 ..      84     142 .. 0.86
   2 ?   -1.9   0.0       3.8   4.2e+03       5      24 ..     361     380 ..     358     385 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.6e-05
   DND1_DSRM   3 avqlLeelCeknkwgsPvYelhs.eag 28 
                 +v +L e C+k++w  P+Y++++ + g
  KHJ30770.1  86 PVNILSEHCQKQRWEKPEYTMSKvSEG 112
                 6899*****************985555 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 3.8
   DND1_DSRM   5 qlLeelCeknkwgsPvYelh 24 
                 + L++ C+ ++++ P Y++ 
  KHJ30770.1 361 SDLKKECAIKRLAEPGYSID 380
                 668999***********985 PP

>> dsRBD2  Double-stranded RNA binding domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   2.1e-05     0.023      26      70 ..      80     124 ..      77     141 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.1e-05
      dsRBD2  26 nWrGsfPrelLcsfCrqhrLsePvfsissapvksssellrsakkl 70 
                 +W G++P ++L++ C+++r  +P +++s+++   ss +  +a++ 
  KHJ30770.1  80 SWTGKLPVNILSEHCQKQRWEKPEYTMSKVSEGYSSMVILKARNP 124
                 8*************************9987665555555444444 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       3.8   4.3e+03      55      95 ..     259     301 ..     253     321 .. 0.72
   2 !   14.1   0.0   3.2e-05     0.036      23     169 ..     615     767 ..     594     769 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 3.8
                 .-EEEEESSHHHHHHHHHHGGGGTGG......GEEEESSS-B- CS
      ResIII  55 ekflflvprkslleqtleefkkflseayke..igkkvsgdkkk 95 
                  ++ + +p++++ ++t+++++++  ++++   +gkk+s+ +++
  KHJ30770.1 259 PRVWVEAPKIEMGKKTRSKIEDLVRKYTTWnpNGKKLSKSQQN 301
                 5667778999999999999999999997767655555444433 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 3.2e-05
                 TTSEEEEEESTTSTHHHHHHHHHH..HH-S......-EEEEESSHHHHHHHHHHGGGGTGG.....GEEEESSS-B--.......-SEEEEEHHHHHHT CS
      ResIII  23 rdkrglikmaTGtGKTlvaaklie..rllkkgkee.kflflvprkslleqtleefkkflseayke.igkkvsgdkkkakekdstnkkilvttiqsldad 117
                  ++  +i  +TG+GK+  +a++i   r+ k+ +e  +++   pr++    + +++++   +a+ + +g +++g++k++     +++ki ++t+  l ++
  KHJ30770.1 615 LHQVTIISGETGSGKSTQCAQFILddRYEKNLGECtQIICTQPRRISAISLADRVSEERCSAVGQeVGYIIRGESKIS-----QKTKIKFVTTGVLLRK 708
                 556678999******9999888852256666665456666777775555555666555554444449999*******9.....999**********999 PP

                 H..........HHHTTT-SEEEEETGGGTTS.T.....TTHHHHHT---SEEEEEESS- CS
      ResIII 118 seee..eeeseellrdrfdviiiDEaHrlgakk.....swreilekfkeavllglTATp 169
                 +++   + ++  ++   +  iiiDE+H  + ++       r  ++k k+ +l+ ++AT+
  KHJ30770.1 709 LQNSggSLDDVVASTVDISHIIIDEVHERSLDTdfllvLLRDMMRKRKDLKLILMSATL 767
                 9777555555555555555********98887545555556668888889999999997 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.4   3.1e-05     0.035      14      43 ..     611     640 ..     603     815 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.1e-05
      ATPase  14 gGipegrvvlitGepGtGKtifalqFlikg 43 
                 + i   +v+ i+Ge+G+GK++ ++qF++  
  KHJ30770.1 611 DSISLHQVTIISGETGSGKSTQCAQFILDD 640
                 5677789********************876 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.023        26       2      15 ..     623     636 ..     622     644 .. 0.82
   2 ?    7.3   0.0    0.0055       6.1      13      46 ..     689     719 ..     688     758 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.023
                 E-TTSSHHHHHHHH CS
      AAA_17   2 GgPGsGKgtqcekl 15 
                 G  GsGK+tqc++ 
  KHJ30770.1 623 GETGSGKSTQCAQF 636
                 557********985 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0055
                 HHHHHHHTEEEEEHHHHHHHHHHTTTSHSSHHHH CS
      AAA_17  13 eklvekygfthlsaGdllreeakrgglakardem 46 
                 +k+ +k +++++++G llr+ +++gg+    d++
  KHJ30770.1 689 SKISQKTKIKFVTTGVLLRKLQNSGGS---LDDV 719
                 5899******************99997...3444 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   5.9e-05     0.066     117     146 ..     604     633 ..     570     644 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 5.9e-05
       T2SSE 117 kiaevlrkavrerglilvsGgTgsGKttll 146
                 ++++++  +++ +++ ++sG TgsGK+t  
  KHJ30770.1 604 ELRQTIIDSISLHQVTIISGETGSGKSTQC 633
                 5778899999*****************975 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   6.7e-05     0.075      19      37 ..     613     631 ..     597     638 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6.7e-05
      AAA_29  19 idlkgatlltGpsGsGKST 37 
                 i+l+++t+++G++GsGKST
  KHJ30770.1 613 ISLHQVTIISGETGSGKST 631
                 566689************9 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.55   6.1e+02      43      61 ..     612     630 ..     591     636 .. 0.83
   2 ?   10.7   0.2   0.00028      0.32      68     159 ..     687     777 ..     684     781 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.55
   IstB_IS21  43 fiekkenivllGpsGvGKs 61 
                  i+ ++  ++ G +G GKs
  KHJ30770.1 612 SISLHQVTIISGETGSGKS 630
                 57789999**********9 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00028
   IstB_IS21  68 gveavraglsvlfvrvedLveelkrarrdgklaralkrllkvdllilDdlgllpldqaeaellfe.viekryerrsiiitsnlpfaewdevlg 159
                 g + + + +++ fv++  L+++l+   + g+l   +++ + ++ +i+D++    ld +   +l++ ++ kr + + i++++ l  + +++ ++
  KHJ30770.1 687 GESKISQKTKIKFVTTGVLLRKLQN--SGGSLDDVVASTVDISHIIIDEVHERSLDTDFLLVLLRdMMRKRKDLKLILMSATLDAGIFEKYFQ 777
                 66789999*************9985..689***************************998888754899999999999999999999998886 PP

>> ADK  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.16   1.8e+02       2      17 ..     622     637 ..     621     645 .. 0.82
   2 ?    7.6   0.0    0.0034       3.8      15      60 ..     690     735 ..     687     745 .. 0.92

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.16
                 EESTTSSHHHHHHHHH CS
                 xxxxxxxxxxxxxxxx RF
         ADK   2 lGaPgaGKGtqaeklv 17 
                  G  g+GK tq+++++
  KHJ30770.1 622 SGETGSGKSTQCAQFI 637
                 6999********9865 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0034
                 HHHHHHTSEEEEHHHHHHHHHHCT-HHHHHHHHHHHTTSS--HHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK  15 klvkkyglahlstGdllRaevksgtelGkeakevmdkgelvpdevv 60 
                 k+ +k +++ ++tG llR+ ++sg +l   +++++d ++++ dev 
  KHJ30770.1 690 KISQKTKIKFVTTGVLLRKLQNSGGSLDDVVASTVDISHIIIDEVH 735
                 7999***************************************996 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       3.7   4.2e+03     104     123 ..     304     323 ..     224     430 .. 0.62
   2 ?   -3.2   0.0         9     1e+04      55      87 ..     476     519 ..     458     551 .. 0.67
   3 ?   11.4   0.1   0.00029      0.33      19      34 ..     616     631 ..     605     634 .. 0.87
   4 ?   -1.9   0.0       3.6     4e+03      94     105 ..     817     828 ..     735     882 .. 0.59

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 3.7
      AAA_23 104 tkkaklelleideleqfise 123
                 +++ k+ +++ +  e+ ise
  KHJ30770.1 304 IDEFKKLGFRQSHIEEAISE 323
                 11112222222222222222 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 9
      AAA_23  55 grgfeksdveiesegkvkayveltfenkdgry...........t 87 
                 ++++  + + i+  ++ +ay++l++++++ +y           +
  KHJ30770.1 476 SQNYPFHAPIISICADLPAYIRLSITKQTLIYltenllgeqmlY 519
                 44555566667777899999999999888777666666655552 PP

  == domain 3  score: 11.4 bits;  conditional E-value: 0.00029
      AAA_23  19 kgltlItGpNGaGKTT 34 
                 + +t+I+G++G+GK+T
  KHJ30770.1 616 HQVTIISGETGSGKST 631
                 689************9 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 3.6
      AAA_23  94 relskkkgkttk 105
                  e++++k+++ +
  KHJ30770.1 817 EEKKQEKSDELD 828
                 122222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.84u 0.27s 00:00:01.10 Elapsed: 00:00:00.40
# Mc/sec: 10456.68
//
Query:       KHJ30771.1  [L=761]
Description: putative vtc domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (761 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.23s 00:00:00.81 Elapsed: 00:00:00.38
# Mc/sec: 5967.44
//
Query:       KHJ30772.1  [L=384]
Description: putative wd repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.3e-15   54.9  14.6     0.0017   19.1   0.3    6.4  6  WD40         WD domain, G-beta repeat
    7.9e-06   25.6   0.1    1.4e-05   24.9   0.1    1.3  1  DUF3494      Protein of unknown function (DUF3494)
    3.4e-05   22.7   1.3       0.89    8.1   0.1    4.0  4  Nup160       Nucleoporin Nup120/160
     0.0016   18.7   0.6       0.23   11.8   0.0    3.1  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0051   16.8   0.0      0.019   15.0   0.0    1.9  2  DUF627       Protein of unknown function (DUF627)
  ------ inclusion threshold ------
      0.024   13.6   0.5       0.37    9.7   0.1    2.2  2  PALB2_WD40   Partner and localizer of BRCA2 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.1   0.00089       2.7       2      38 .]      72     110 ..      71     110 .. 0.80
   2 !   13.6   0.2   3.3e-05     0.098       5      38 .]     118     154 ..     116     154 .. 0.75
   3 !    6.8   0.0    0.0045        13       9      37 ..     181     203 ..     172     204 .. 0.75
   4 ?    2.2   0.1      0.12   3.7e+02      10      35 ..     221     250 ..     215     251 .. 0.76
   5 !    9.4   0.0    0.0007       2.1       9      38 .]     265     293 ..     258     293 .. 0.80
   6 !   19.1   0.3   5.7e-07    0.0017       1      37 [.     297     334 ..     297     334 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00089
                 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 
                 + +++++G   +vts+a  + +++ l+ +++D+++  Wd
  KHJ30772.1  72 KETKVYRGPsAPVTSVAiACANNSILFGACWDKKIWSWD 110
                 568899***777****97666667777569*****9998 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 3.3e-05
                 EEEESSSS.....E.EEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   5 rtltGHss.....v.tslafspdgaw.lasGsdDgtvriWd 38 
                 +t+ GHs+     + t l    dg+  l+sG+ D ++ iWd
  KHJ30772.1 118 KTYIGHSDfvktiItTKL----DGKNiLISGGADAKIIIWD 154
                 7999**556666556677....66663469*99*******9 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0045
                 SSSSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   9 GHssvtslafspdgawlasGsdDgtvriW 37 
                  H sv s+        ++s+s D+ +r W
  KHJ30772.1 181 SHASVESQ------LIVFSASSDPVIRQW 203
                 57678777......44557766******* PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.12
                 S...SSEEEEEEETTSSEEE.EEETTSEEE CS
        WD40  10 H...ssvtslafspdgawla.sGsdDgtvr 35 
                 H   +sv+ + fs d + ++ ++s Dgt +
  KHJ30772.1 221 HeneTSVYKILFSEDEDSHLwTASADGTAK 250
                 3313449999999999999998888**976 PP

  == domain 5  score: 9.4 bits;  conditional E-value: 0.0007
                 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  H + v+++    + ++++++++D +v++W+
  KHJ30772.1 265 EHgDYVNAV--EVSEDFIITAGRDENVKLWK 293
                 584449988..778889999999*******6 PP

  == domain 6  score: 19.1 bits;  conditional E-value: 5.7e-07
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 g++ ++++GH + vt+l +   g+ ++s s Dgtvr W
  KHJ30772.1 297 GELFHVYEGHfDQVTGLVVTECGKSVVSVSIDGTVRCW 334
                 5789******666****9999999999999******** PP

>> DUF3494  Protein of unknown function (DUF3494)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.1   4.5e-09   1.4e-05     139     196 ..     133     191 ..     126     195 .. 0.89

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 4.5e-09
                 E-.TT--EEEETT--GGGEEEEESS-EEE-TT-EEEEEEEESS-EEE-TT-EEEEEEEE CS
     DUF3494 139 va.sgssvvLinGAqaknvfWqvggsatlgtgstfeGtilaqtsitlstgatvnGrlla 196
                 ++  g+++++ +GA+ak ++W++++   l t  +++ ++l+ +  ++++ a+v+ +l+ 
  KHJ30772.1 133 TKlDGKNILISGGADAKIIIWDIATGQRLYTLQDMQSNMLSLQDLAVDSHASVESQLIV 191
                 4446789***********************************************99986 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0    0.0006       1.8     207     250 ..      74     114 ..      64     124 .. 0.86
   2 !    8.1   0.1    0.0003      0.89     224     260 ..     129     173 ..     116     240 .. 0.73
   3 ?    2.0   0.0     0.022        65     225     251 ..     272     298 ..     265     311 .. 0.85
   4 ?    0.9   0.0     0.047   1.4e+02     232     255 ..     321     344 ..     306     364 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0006
                 -SS---TT-ECEEEEET.....TTTEEEEEETT-EEEEEETTTT CS
      Nup160 207 srrksgasvalsldvavavveigqtylfalsrdgkLrvWnlltg 250
                 ++ ++g+s a +++va+a++  ++++lf ++ d+k+  W+l+++
  KHJ30772.1  74 TKVYRGPS-APVTSVAIACA--NNSILFGACWDKKIWSWDLEND 114
                 56788888.88999******..6*******************97 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0003
                 ........TTTEEEEEETT-EEEEEETTTTEEEEE.EE--..... CS
      Nup160 224 avvei...gqtylfalsrdgkLrvWnlltgkclat.idll....r 260
                  ++++   g+++l +   d k+ +W+++tg++l+t +d++     
  KHJ30772.1 129 TIITTkldGKNILISGGADAKIIIWDIATGQRLYTlQDMQsnmlS 173
                 4455557799*****************************954331 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.022
                 ....TTTEEEEEETT-EEEEEETTTTE CS
      Nup160 225 vveigqtylfalsrdgkLrvWnlltgk 251
                  ve+ ++++ ++ rd ++++W  +tg 
  KHJ30772.1 272 AVEVSEDFIITAGRDENVKLWKRDTGE 298
                 455689***************988876 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.047
                 EEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 232 ylfalsrdgkLrvWnlltgkclat 255
                  ++++s dg++r W l+ g +   
  KHJ30772.1 321 SVVSVSIDGTVRCWPLEKGEIEKE 344
                 5789**********9988766555 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.026        79      47      81 ..     134     169 ..      87     176 .. 0.80
   2 ?   -2.6   0.0       2.3   6.9e+03      39      66 ..     225     253 ..     218     268 .. 0.63
   3 !   11.8   0.0   7.7e-05      0.23       7      80 ..     277     349 ..     274     368 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.026
  ANAPC4_WD40  47 kpdgk.lLavaysdgevrlldaesgkvvhslsvkse 81 
                  k dgk +L  + +d ++ + d+ +g+ + +l+  ++
   KHJ30772.1 134 KLDGKnILISGGADAKIIIWDIATGQRLYTLQDMQS 169
                  556643788999*************99998876555 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.3
  ANAPC4_WD40  39 sevrsLaWkpdg.klLavaysdgevrlld 66 
                   +v ++ +++d+ + L  a +dg+ + l+
   KHJ30772.1 225 TSVYKILFSEDEdSHLWTASADGTAKCLS 253
                  55666666655414566777777666554 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 7.7e-05
  ANAPC4_WD40   7 mDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                   D i  a  d+++ +   +  +++++  +++  +v++L   + gk  + +  dg+vr    e+g++ ++++ k+
   KHJ30772.1 277 EDFIITAGRDENVKLWKRDTGELFHV-YEGHFDQVTGLVVTECGKSVVSVSIDGTVRCWPLEKGEIEKEIKKKK 349
                  588888999999***9999999**99.788999*********************************99988776 PP

>> DUF627  Protein of unknown function (DUF627)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   6.4e-06     0.019       3      45 ..     261     303 ..     259     326 .. 0.91
   2 ?   -1.7   0.0      0.96   2.9e+03      73      87 ..     362     380 ..     339     383 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 6.4e-06
      DUF627   3 kdllargnhikALeiiedlisrhgedeksallhrlqGtifvkl 45 
                 +++++ g++++A e+ ed+i   g+de+ +l +r  G++f  +
  KHJ30772.1 261 EEVYEHGDYVNAVEVSEDFIITAGRDENVKLWKRDTGELFHVY 303
                 67899*********************************99765 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.96
      DUF627  73 s....rfyArsLfelasql 87 
                      +++A+ + ela+ +
  KHJ30772.1 362 DipkvHMTAEEMAELAELM 380
                 3556688999999999865 PP

>> PALB2_WD40  Partner and localizer of BRCA2 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1   0.00012      0.37     190     220 ..     138     168 ..     127     196 .. 0.82
   2 ?    2.0   0.0     0.026        79     186     214 ..     273     301 ..     233     352 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00012
  PALB2_WD40 190 kdallgttvlnniviWnlktGqllkkieige 220
                 k+ l++  ++ +i+iW+++tGq l +++  +
  KHJ30772.1 138 KNILISGGADAKIIIWDIATGQRLYTLQDMQ 168
                 57899999**************998877544 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.026
  PALB2_WD40 186 veGekdallgttvlnniviWnlktGqllk 214
                 ve  +d ++++  ++n+ +W   tG l++
  KHJ30772.1 273 VEVSEDFIITAGRDENVKLWKRDTGELFH 301
                 56667777777777888888888887764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.37
# Mc/sec: 3132.41
//
Query:       KHJ30773.1  [L=834]
Description: putative minichromosome loss protein 1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   3.4e-100  335.2   0.0    2.9e-99  332.2   0.0    2.2  2  Mcl1_mid         Minichromosome loss protein, Mcl1, middle re
    1.6e-16   60.4   0.0    2.6e-05   24.4   0.0    6.7  7  ANAPC4_WD40      Anaphase-promoting complex subunit 4 WD40 do
    4.6e-16   58.9   5.8    9.1e-06   26.3   0.1    7.0  7  WD40             WD domain, G-beta repeat
      2e-05   23.8   0.0    4.1e-05   22.8   0.0    1.4  1  Coatomer_WDAD    Coatomer WD associated region
     0.0017   18.2   0.1       0.16   11.8   0.0    2.8  2  eIF2A            Eukaryotic translation initiation factor eIF
     0.0074   16.4   1.0       0.19   11.8   2.1    2.4  2  DNA_pol_alpha_N  DNA polymerase alpha subunit p180 N terminal
  ------ inclusion threshold ------
      0.011   15.7   0.3       0.78    9.8   0.0    3.5  3  WD40_3           WD domain, G-beta repeat
      0.024   14.0   0.0       0.73    9.1   0.0    2.4  2  WD40_like        WD40-like domain
      0.032   14.3   0.0         14    5.8   0.0    3.5  3  BBS2_Mid         Ciliary BBSome complex subunit 2, middle reg
       0.15   11.0   0.1        2.9    6.8   0.0    2.7  3  Ge1_WD40         WD40 region of Ge1, enhancer of mRNA-decappi


Domain annotation for each model (and alignments):
>> Mcl1_mid  Minichromosome loss protein, Mcl1, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.19   3.3e+02     144     199 ..      56     127 ..      16     175 .. 0.49
   2 !  332.2   0.0  1.6e-102   2.9e-99       2     297 .]     418     706 ..     417     706 .. 0.98

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.19
    Mcl1_mid 144 slpgpvVtlaaskdklavvyhegaplngnqeleyslldlskkkkkvlqregplpL.........................s 199
                   p +  t++as++ ++vv  ++++  +  +le +l++         +++++lp+                         +
  KHJ30773.1  56 DCP-DQNTAVASTNDFFVVG-SEDGSISRYSLETMLFEKY-------LTRCSLPIrdvdlsmdgvwcavasdeiavkivkT 127
                 344.3335555556666666.2333444455666666632.......2233333322222225555554444444444440 PP

  == domain 2  score: 332.2 bits;  conditional E-value: 1.6e-102
    Mcl1_mid   2 pfqpgstplgeegdrryLawNsiGvvttveedeeensieveFhDtslhrevhftdsfgftlasLseeglllAskaskseekkpstlyyrpleswasnse 100
                 +fqpgstp++  g r+yL++N iG+v+tv++d+ +n+++veF+D ++hr++hftd+f ++ a+L+e+g+l++++a+++   +p++++yrp+e+w++ ++
  KHJ30773.1 418 SFQPGSTPWR--GGRKYLCLNLIGFVWTVDQDT-HNTVTVEFYDHEFHRDFHFTDTFLYDKACLNENGTLFSCPAQEE---SPASIFYRPHETWTTRTD 510
                 8*********..55***************9998.9***************************************9765...59************99** PP

    Mcl1_mid 101 WsvkLpegEevtavalgkkwvavaTskrylRiFslsGvqlavlslpg.pvVtlaaskdklavvyhegap.lngnqeleyslldlskkkkkvlqregplp 197
                 W+vkLp++Eev +++l+++++ v+Ts++y+Ri++l+G++ +++++++ p Vt+a++kd ++    +g + + g+++l y++ +++++  +++q+e++++
  KHJ30773.1 511 WRVKLPKDEEVISISLSDSYITVTTSTNYVRIYTLFGIPFRIYRQKScPSVTCASWKDFILLLG-NGPVdAYGHTKLLYTIQNVKQD--EICQNEDVVA 606
                 ****************************************************************.78889**************999..8********* PP

    Mcl1_mid 198 LspgstLkwlgFseegdpviydsdgvlrvlskarepkqarWvpvldtkklakkkss.kedsyWpvgvsedklqcillkgsekyPsvlprpllselelkl 295
                 L++g tLk+++Fse+gdp+iyds+g+l++l ++r+p+qa+Wvp+ldt+ l + +s+ k++sy+pv+vs++k++ci+lkg+e yP++ prpllse+++++
  KHJ30773.1 607 LPNGVTLKSVFFSENGDPFIYDSNGILLTLLHWRTPSQAQWVPLLDTRLLPRLASGlKTESYFPVAVSNNKFHCIILKGTELYPYF-PRPLLSEFDFQV 704
                 **************************************************************************************.************ PP

    Mcl1_mid 296 Pl 297
                 Pl
  KHJ30773.1 705 PL 706
                 *8 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0      0.02        35      35      66 ..      13      44 ..       2      50 .. 0.86
   2 ?    1.5   0.0      0.21   3.8e+02       6      70 ..      67     130 ..      63     141 .. 0.70
   3 !   17.5   0.0   2.2e-06    0.0039      15      69 ..     116     171 ..     106     181 .. 0.74
   4 ?    5.3   0.0     0.013        24      36      73 ..     189     226 ..     176     235 .. 0.81
   5 !   24.4   0.0   1.4e-08   2.6e-05       2      89 ..     198     282 ..     197     285 .. 0.85
   6 ?    4.0   0.0     0.034        62      41      65 ..     277     301 ..     274     304 .. 0.79
   7 ?   -0.7   0.0      0.98   1.8e+03      48      89 ..     526     566 ..     505     568 .. 0.58

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.02
  ANAPC4_WD40 35 dkedsevrsLaWkpdgklLavaysdgevrlld 66
                 +++ +  ++L++ pdg+ L  + s+++ r+++
   KHJ30773.1 13 PAHTRGLTHLSYTPDGTRLITVGSNNTTRVYK 44
                 66778889*******************99886 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.21
  ANAPC4_WD40   6 tmDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesg 70 
                  t+D + +++edg++  + l+  ++++   +  +  +r++  ++dg   ava ++ +v++++  + 
   KHJ30773.1  67 TNDFFVVGSEDGSISRYSLE-TMLFEKYLTRCSLPIRDVDLSMDGVWCAVASDEIAVKIVKTDDI 130
                  67777777777776544444.34555556677788899999999999999999888888877665 PP

  == domain 3  score: 17.5 bits;  conditional E-value: 2.2e-06
  ANAPC4_WD40  15 edgellvfRlngqrvwtl.eedkedsevrsLaWkpdgklLavaysdgevrlldaes 69 
                  +++e++v+ ++   + ++    ++ + v++L++ p gkl+a ++ dg v +++ +s
   KHJ30773.1 116 ASDEIAVKIVKTDDIRSVkFLREHTKPVKHLSFDPAGKLIALSCTDGIVYIYSLSS 171
                  34444444444444444432578999**************************9876 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.013
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvv 73 
                  +ed   +++aW pdg+ +a  ++  +++++++ + k  
   KHJ30773.1 189 TEDDICSKVAWCPDGRAFAAPTATRSIQVVSSGDWKNQ 226
                  56666789********************9998776655 PP

  == domain 5  score: 24.4 bits;  conditional E-value: 1.4e-08
  ANAPC4_WD40   2 swcptmDLiAlatedgellvfRl.ng..qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  +wcp    +A  t++ +++v    ++  q+ ++    ++d+ + +++W+++g +La a +d ++ l +  ++kv+ +++ +s      l W
   KHJ30773.1 198 AWCPDGRAFAAPTATRSIQVVSSgDWknQKAFSN---GHDGDILAISWSKNGAMLASASKDRKIVLWETRDQKVIATYPFASV---IDLAW 282
                  7999999999999999999887656744666666...9**************************************9998753...55555 PP

  == domain 6  score: 4.0 bits;  conditional E-value: 0.034
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrll 65 
                  v +LaW+p  +lL +   +gev ++
   KHJ30773.1 277 VIDLAWHPTRNLLSFTNMEGEVYIY 301
                  6678888888888888888888877 PP

  == domain 7  score: -0.7 bits;  conditional E-value: 0.98
  ANAPC4_WD40  48 pdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                   +++ + v +s + vr++    g   + ++ ks  +vtc +W
   KHJ30773.1 526 LSDSYITVTTSTNYVRIYTLF-GIPFRIYRQKSCPSVTCASW 566
                  345566777777777776553.33333344444445666666 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0069        12       9      37 ..      14      43 ..       6      44 .. 0.83
   2 ?    1.9   0.1      0.27   4.8e+02      20      34 ..      66      80 ..      52      81 .. 0.78
   3 ?    0.6   0.1       0.7   1.2e+03      13      31 ..     101     118 ..      95     122 .. 0.86
   4 !   17.0   0.0   4.6e-06    0.0082       4      37 ..     133     167 ..     130     168 .. 0.90
   5 ?   -1.6   0.0       3.4   6.1e+03      14      26 ..     195     207 ..     186     222 .. 0.74
   6 !   26.3   0.1   5.1e-09   9.1e-06       2      37 ..     224     261 ..     223     262 .. 0.91
   7 ?   -0.1   0.0       1.2   2.1e+03      12      37 ..     276     301 ..     267     302 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0069
                SS.SSEEEEEEETTSSEEEE.EETTSEEEEE CS
        WD40  9 GH.ssvtslafspdgawlas.GsdDgtvriW 37
                +H  + t+l++ pdg+ l++ Gs ++t r++
  KHJ30773.1 14 AHtRGLTHLSYTPDGTRLITvGS-NNTTRVY 43
                685569***********985277.***9998 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.27
                TTSSEEEEEETTSEE CS
        WD40 20 pdgawlasGsdDgtv 34
                + +++++ Gs+Dg++
  KHJ30773.1 66 STNDFFVVGSEDGSI 80
                55677888*****98 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.7
                 EEEEEEETTSSEEEEEETT CS
        WD40  13 vtslafspdgawlasGsdD 31 
                 +++++ s dg w a +s D
  KHJ30773.1 101 IRDVDLSMDGVWCAVAS-D 118
                 89999*******98888.5 PP

  == domain 4  score: 17.0 bits;  conditional E-value: 4.6e-06
                 EEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawla.sGsdDgtvriW 37 
                 ++ l+ H ++v +l+f+p g+++a s++ Dg v+i+
  KHJ30773.1 133 VKFLREHtKPVKHLSFDPAGKLIAlSCT-DGIVYIY 167
                 667899*999************987999.*****98 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 3.4
                 EEEEEETTSSEEE CS
        WD40  14 tslafspdgawla 26 
                 + +a++pdg+ +a
  KHJ30773.1 195 SKVAWCPDGRAFA 207
                 57899***98754 PP

  == domain 6  score: 26.3 bits;  conditional E-value: 5.1e-09
                 EEEEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   2 qclrtlt.GH.ssvtslafspdgawlasGsdDgtvriW 37 
                 ++++ ++ GH +++ ++++s++ga+las+s+D+++ +W
  KHJ30773.1 224 KNQKAFSnGHdGDILAISWSKNGAMLASASKDRKIVLW 261
                 77888877**888************************* PP

  == domain 7  score: -0.1 bits;  conditional E-value: 1.2
                 SEEEEEEETTSSEEE.EEETTSEEEEE CS
        WD40  12 svtslafspdgawla.sGsdDgtvriW 37 
                 sv +la++p  ++l+ +  + g v+i+
  KHJ30773.1 276 SVIDLAWHPTRNLLSfT-NMEGEVYIY 301
                 46699*******98523.347777766 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   2.3e-08   4.1e-05      29     171 ..     137     302 ..     119     310 .. 0.86

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 2.3e-08
                    XXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX..............XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXX.XXXXXXXXXXXXXX CS
  Coatomer_WDAD  29 gsieiypqslshnpngrfvlV.cgdgeyiiyt..............alalrnkaygkgldfvwvssnr.favlessksvkifknfkekktksikle 108
                     +    +++ls++p+g+++++ c dg   iy+               + + +++ + +++++w++ +r fa+ + ++s++++ + + k++k+++  
     KHJ30773.1 137 REHTKPVKHLSFDPAGKLIALsCTDGIVYIYSlssdppdlvrkidgLIRNVETEDDICSKVAWCPDGRaFAAPTATRSIQVVSSGDWKNQKAFSNG 232
                    555567899***********************************9877777888899********5555************988877777788877 PP

                    XXXXXXXX.....XXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXX CS
  Coatomer_WDAD 109 yqvdkifg.....GalLgvkseg.svsfYDweqgklvrridvkkvknVvwsddgelvalv.skdtvyils 171
                     + d +       Ga+L   s++  +++++   +k+++     +v +  w ++++l+ ++  + +vyi++
     KHJ30773.1 233 HDGDILAIswsknGAMLASASKDrKIVLWETRDQKVIATYPFASVIDLAWHPTRNLLSFTnMEGEVYIYN 302
                    6655555477*******98877658*******************************99984477788765 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.037        66     141     169 ..     189     217 ..     139     221 .. 0.86
   2 !   11.8   0.0     9e-05      0.16      55     131 ..     230     302 ..     220     312 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.037
                 EE-TT--EEEE-TTSSEEEEEE-TTT-SS CS
       eIF2A 141 aeaanatlvewspdgryvlTattaprlrv 169
                 +e   +++v w+pdgr ++  t + +++v
  KHJ30773.1 189 TEDDICSKVAWCPDGRAFAAPTATRSIQV 217
                 566789************98877766665 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 9e-05
                 CEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECS.CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEE CS
       eIF2A  55 elkkegpihdvaWspkskefaviyGkmpakvslfdlk.vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwd 131
                 +  ++g+i +++Ws+++  +a      ++k++l++++  kvi+++  ++   + ++p+ +l+    f n++Ge+ i++
  KHJ30773.1 230 SNGHDGDILAISWSKNGAMLA--SASKDRKIVLWETRdQKVIATYPFASVIDLAWHPTRNLL---SFTNMEGEVYIYN 302
                 5557899**********9765..6789*********7699999*****************98...699********98 PP

>> DNA_pol_alpha_N  DNA polymerase alpha subunit p180 N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.55   9.9e+02      20      51 ..     294     325 ..     285     329 .. 0.83
   2 !   11.8   2.1   0.00011      0.19      43      58 ..     368     383 ..     365     384 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.55
  DNA_pol_alpha_N  20 veeeeriYdeVdeeeYkklvrkrleeddFvvD 51 
                      +e e  iY      eY++lv   l+   F+ D
       KHJ30773.1 294 MEGEVYIYNDFVPPEYSHLVDLSLQTSPFIHD 325
                      55667788888889****************98 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00011
  DNA_pol_alpha_N  43 leeddFvvDDdgegYv 58 
                      +++ddF+ DDdg gY+
       KHJ30773.1 368 QDDDDFISDDDGAGYA 383
                      5788***********6 PP

>> WD40_3  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00043      0.78       6      51 ..      15      61 ..      12      64 .. 0.87
   2 ?    0.6   0.0      0.32   5.7e+02       6      38 ..     139     171 ..     138     179 .. 0.90
   3 ?   -0.8   0.0      0.86   1.5e+03      20      35 ..     613     628 ..     604     630 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00043
      WD40_3  6 HsvgIkklfpnpsGtrlvfiDekgdgfvynPvs.eelleipdfpstv 51
                H+ g+++l   p+Gtrl+ +   +   vy++    e + i d+p++ 
  KHJ30773.1 15 HTRGLTHLSYTPDGTRLITVGSNNTTRVYKTGFdGEPTNIDDCPDQN 61
                999**************************986537889998888875 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.32
      WD40_3   6 HsvgIkklfpnpsGtrlvfiDekgdgfvynPvs 38 
                 H+ ++k+l  +p+G  +++   +g +++y+  s
  KHJ30773.1 139 HTKPVKHLSFDPAGKLIALSCTDGIVYIYSLSS 171
                 9999**************999999999999766 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.86
      WD40_3  20 trlvfiDekgdgfvyn 35 
                  + vf+ e gd f+y 
  KHJ30773.1 613 LKSVFFSENGDPFIYD 628
                 4679***********6 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0    0.0004      0.73      77     131 ..      53     128 ..      31     172 .. 0.66
   2 ?    5.9   0.0    0.0038       6.8       3     144 ..     101     259 ..      99     305 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0004
   WD40_like  77 enekieedistvkviddklliGtnkGsiyvfskdlq.leevllgqsseIkeikie....................n 131
                 ++ +  ++ + v  ++d +++G++ Gsi  +s + + +e+ l   s +I+++  +                    +
  KHJ30773.1  53 NIDDCPDQNTAVASTNDFFVVGSEDGSISRYSLETMlFEKYLTRCSLPIRDVDLSmdgvwcavasdeiavkivktD 128
                 5556667778999*******************98651555556666699999988444444444444444444440 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0038
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvkllddd.lilvvtlDGtillsllenee.........evenekieedi.stv.. 88 
                 i  +d+s +g   ++ +++  ++++k++   sv  + + +  v +  +     li     DG +  + l+ +           ++n + e+di s+v  
  KHJ30773.1 101 IRDVDLSMDGVWCAVASDEIAVKIVKTDDIRSVKFLREHTKPVKHLSFDPAGkLIALSCTDGIVYIYSLSSDPpdlvrkidgLIRNVETEDDIcSKVaw 199
                 567999****99999999999999999999999999999999999999755526666778****99999998777777677778999999999555511 PP

   WD40_like  89 kviddklliGtnkGsiyv.fskdlqleevll.gqsseIkeikienn..kiysLsesafiv 144
                 + ++  ++  t + si v  s d ++++ ++ g+  +I+ i+ ++n  ++ s s+++ iv
  KHJ30773.1 200 CPDGRAFAAPTATRSIQVvSSGDWKNQKAFSnGHDGDILAISWSKNgaMLASASKDRKIV 259
                 445668999999999998456799999988636899999999887722344555555444 PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.038        67      14      36 ..      70      92 ..      63     105 .. 0.86
   2 ?   -0.7   0.0      0.78   1.4e+03      17      65 ..     115     167 ..      98     171 .. 0.68
   3 ?    5.8   0.0    0.0076        14      13      76 ..     529     592 ..     521     606 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.038
    BBS2_Mid 14 eLvvgsddfeirvfkeeelvaei 36
                  vvgs+d +i  ++ e++++e 
  KHJ30773.1 70 FFVVGSEDGSISRYSLETMLFEK 92
                579****************9985 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.78
    BBS2_Mid  17 vgsddfeirvfkeeel..vaeitetekvvslarleker..fayaleNGtvgvy 65 
                 v+sd+  +++ k +++  v+ ++e+ k+v   + ++    +a +   G v +y
  KHJ30773.1 115 VASDEIAVKIVKTDDIrsVKFLREHTKPVKHLSFDPAGklIALSCTDGIVYIY 167
                 89999999999999872244566666666555554433335666666776666 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0076
    BBS2_Mid  13 neLvvgsddfeirvfkeeelvaeitetekvvslarlekerfayaleNGtvgvyekkerlWrvks 76 
                 +++ v +  + +r++    + + i  ++ + s++  + ++f+  l NG v  y +++ l+ +++
  KHJ30773.1 529 SYITVTTSTNYVRIYTLFGIPFRIYRQKSCPSVTCASWKDFILLLGNGPVDAYGHTKLLYTIQN 592
                 688999999********************************************99999888765 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0       3.4     6e+03     190     214 ..      19      43 ..      15      46 .. 0.77
   2 ?    6.8   0.0    0.0016       2.9     170     215 ..     123     168 ..     111     174 .. 0.79
   3 ?   -0.4   0.0      0.24   4.3e+02     186     214 ..     233     261 ..     210     267 .. 0.79

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 3.4
    Ge1_WD40 190 iveaafspdGtalatasedGevkff 214
                 +++ +++pdGt l t  ++ + + +
  KHJ30773.1  19 LTHLSYTPDGTRLITVGSNNTTRVY 43 
                 5677899****99998877777766 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0016
    Ge1_WD40 170 gelsveeieegllkieehsliveaafspdGtalatasedGevkffq 215
                 + +++++i+++ +  e++  + + +f p G  +a +++dG+v  + 
  KHJ30773.1 123 KIVKTDDIRSVKFLREHTKPVKHLSFDPAGKLIALSCTDGIVYIYS 168
                 45666777776666566668999*******************9886 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.24
    Ge1_WD40 186 ehsliveaafspdGtalatasedGevkff 214
                 ++  i   ++s +G+ la as+d ++ ++
  KHJ30773.1 233 HDGDILAISWSKNGAMLASASKDRKIVLW 261
                 4557888999*************998777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (834 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.71u 0.27s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 5564.01
//
Query:       KHJ30774.1  [L=581]
Description: putative patatin-like phospholipase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-35  120.8   0.4    4.5e-34  117.1   0.1    2.2  2  DUF3336   Domain of unknown function (DUF3336)
    2.4e-12   47.5   0.2    7.8e-12   45.8   0.2    1.9  1  Patatin   Patatin-like phospholipase


Domain annotation for each model (and alignments):
>> DUF3336  Domain of unknown function (DUF3336)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.1   0.1     5e-38   4.5e-34      11     130 ..      36     156 ..      26     178 .. 0.87
   2 ?    1.7   0.0     0.022     2e+02      60     101 ..     278     314 ..     257     319 .. 0.75

  Alignments for each domain:
  == domain 1  score: 117.1 bits;  conditional E-value: 5e-38
     DUF3336  11 lrkklrkattYeeWkeaAkeLDellgndeWkendes.yYdyklvkkvlkkLrklrekedlkellellrtclkrNfagienprLYsetyiGTKklieeYi 108
                 + + l++a+t+eeW+eaA +LD+l+g+d W++n++s +Ydy+l+ ++l+++  +re++d+ +l++llr+ l rN+++i+ pr+Y++++ GTK lie+Yi
  KHJ30774.1  36 WYSILKDAKTFEEWEEAALQLDNLTGKDLWRQNPTSkHYDYRLIHERLRSIIIAREQCDFPQLVNLLRSGLIRNLGNISTPRIYNHAFAGTKLLIEDYI 134
                 6677999******************************************************************************************** PP

     DUF3336 109 devekalellaetkqlsaeekl 130
                 ++v +a++ +++ ++ ++ e +
  KHJ30774.1 135 TQVAQAISDVTKLPTSPEGENY 156
                 *********9987774433333 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.022
     DUF3336  60 LrklrekedlkellellrtclkrNfagienprLYsetyiGTK 101
                 Lr+  ++  + + +++l++c++ N+++++ ++ Y +t    K
  KHJ30774.1 278 LRSFLREGYFLD-VSVLEKCMRANVGDLTFEEAYYRT----K 314
                 555555555555.799**********99876666555....3 PP

>> Patatin  Patatin-like phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.2   8.7e-16   7.8e-12       1     172 [.     185     350 ..     185     363 .. 0.85

  Alignments for each domain:
  == domain 1  score: 45.8 bits;  conditional E-value: 8.7e-16
     Patatin   1 LvlsGGGsrgafslgalkaLkkelgerfdiisGtSaGAiia...................lllalgrdpaalvddlrnlllnkifdrdllirelaanla 80 
                 L+l+GG + g+ +lg++kaL  ++g  ++iisGt +GA+ia                   + l+++++   l+++ ++  +n +  r+         l 
  KHJ30774.1 185 LILQGGAIFGLCHLGVVKAL-LARGLLPRIISGTATGALIAalvgthtedelpglisgekIDLTAFGTENSLDKKAEQEYRNPFMARW-------DTLR 275
                 89*****************9.9*******************88888888888888888886666666666666666666666666666.......5777 PP

     Patatin  81 arlsgllgkgglfdaealrellrkvladktlkrlsarlgklpllkslftanqavpaittataatastanranglytedddddvdladavraS 172
                 + l+++l +g ++d+ +l++ +r+ ++d+t++++  r +++                  + ++ ++t  +  +l+++ ++++v +++a+ aS
  KHJ30774.1 276 RSLRSFLREGYFLDVSVLEKCMRANVGDLTFEEAYYRTKRV-----------------LNITVATTTKGGVPNLLNYLTAPNVLIWSAAIAS 350
                 89999999999******************************.................6788888888888889999999999999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (581 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       384  (0.0214178); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 4149.53
//
Query:       KHJ30775.1  [L=387]
Description: putative wasp-interacting protein vrp1p [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-09   35.9   0.2    4.5e-09   35.9   0.2    2.5  2  WH2       WH2 motif


Domain annotation for each model (and alignments):
>> WH2  WH2 motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.2   2.5e-13   4.5e-09       1      30 []      21      47 ..      21      47 .. 0.93
   2 ?   -0.6   0.4     0.073   1.3e+03      14      22 ..     116     124 ..     116     124 .. 0.90

  Alignments for each domain:
  == domain 1  score: 35.9 bits;  conditional E-value: 2.5e-13
                X-TCCHHHHHHHHHH..HTTBSS--XEEXX CS
         WH2  1 ggggRgALLadIraGskaqLKKveetndrs 30
                ++g+R+ALL+dI  G  + LKKv +tndrs
  KHJ30775.1 21 PAGNRSALLSDISRG--KPLKKV-TTNDRS 47
                579************..66****.*****8 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.073
                 HH..HTTBS CS
         WH2  14 aGskaqLKK 22 
                 +G++++LKK
  KHJ30775.1 116 SGGIPKLKK 124
                 6999****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      188  (0.0104858); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 2838.08
//
Query:       KHJ30776.1  [L=302]
Description: putative surf4 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-95  318.5   8.6    4.5e-95  318.3   8.6    1.0  1  SURF4     SURF4 family


Domain annotation for each model (and alignments):
>> SURF4  SURF4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  318.3   8.6   2.5e-99   4.5e-95       2     267 .]      37     302 .]      36     302 .] 0.98

  Alignments for each domain:
  == domain 1  score: 318.3 bits;  conditional E-value: 2.5e-99
       SURF4   2 eliakiedlaetllrktkkylPtlarlllvatfleDglrllfqwsdqveyldkskklgyflatllvlvvllglligsllvvlrkkvayavgvLlfivil 100
                 e+ +kied+ +tl   +k++lP ++r+l+v tfleD++r+++qwsdq  yl+++++++y ++ l++++++++++  s lv++r+  +yav+ L+ ++i+
  KHJ30776.1  37 EYTGKIEDFLDTLSDPVKPFLPAIGRFLIVVTFLEDAIRIITQWSDQLLYLREYRHIPYGITHLFLILNVISMVSCSILVIARRYSDYAVAGLIGVLIT 135
                 67899********************************************************************************************** PP

       SURF4 101 qaiaYslltdlklllrnlsvigglllllaesliekkslfaglPeleeeekaksylllagrvllvlmfisllafe.lsftrvlltiigvaliilvviGfk 198
                 qa+ Y+l+ dl+++lrnlsv+ggll++l++s + k + faglPe++e ++ k y++lagrvll+++fi+++++     +r+++   g +++i+vv+Gfk
  KHJ30776.1 136 QAVGYGLIFDLNFFLRNLSVMGGLLMVLSDSWVSKTKAFAGLPEIDE-KDRKMYFQLAGRVLLIFLFIGFIFSGtWNIWRIIVAFFGAVACIMVVVGFK 233
                 **********************************************9.899********************99857889******************** PP

       SURF4 199 tklaalvLvllLfvlnlvlnafWtipkekelrdflkYdffqtlsviGGLLlvvatGpGelsvDekkkky 267
                 +k++a++Lv++L+++n+++n+fWt+ ++++ +df kYdffq ls++GGLLl+v+ GpG+ s+Dekkk y
  KHJ30776.1 234 AKFSAIMLVVILSIFNILVNNFWTLHEHHPHKDFAKYDFFQILSIVGGLLLLVNSGPGKYSIDEKKKVY 302
                 *******************************************************************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1016  (0.056668); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 2367.25
//
Query:       KHJ30777.1  [L=328]
Description: hypothetical protein EV44_g5659 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.025   13.8   0.7      0.049   12.8   0.7    1.4  1  RE_NgoPII  NgoPII restriction endonuclease


Domain annotation for each model (and alignments):
>> RE_NgoPII  NgoPII restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.7   2.7e-06     0.049      86     120 ..      47      81 ..      40      87 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.7e-06
   RE_NgoPII  86 kkiesagseiaLnssyPksklysnssmitkacrec 120
                  k+esa++ +aLn s Pk+++++ ss+i++   ++
  KHJ30777.1  47 SKTESASALLALNHSKPKQNIFQASSKIESMIISI 81 
                 699*************************9877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       674  (0.0375927); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.20s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 2623.68
//
Query:       KHJ30778.1  [L=450]
Description: hypothetical protein EV44_g4416 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.018   15.1   0.7        0.2   11.7   0.0    2.8  3  GcnA_N         N-acetyl-beta-D-glucosaminidase N-terminal dom
      0.067   12.9   0.7       0.11   12.2   0.7    1.5  1  GDPD           Glycerophosphoryl diester phosphodiesterase fa
       0.17   11.9   0.1       0.65   10.1   0.1    2.0  1  TFIIA_gamma_N  Transcription initiation factor IIA, gamma sub


Domain annotation for each model (and alignments):
>> GcnA_N  N-acetyl-beta-D-glucosaminidase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   3.3e-05       0.2       6      45 ..      19      58 ..      18      68 .. 0.93
   2 ?   -2.8   0.1       1.1   6.6e+03       6      22 ..     171     187 ..     168     196 .. 0.79
   3 ?   -0.4   0.0       0.2   1.2e+03      31      48 ..     302     319 ..     286     320 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 3.3e-05
      GcnA_N  6 tekqekavelLekqlsLgdveievaqsdqasirikGeeGd 45
                + k++kav++L+ ++s     +e +q +++s +i+G++ +
  KHJ30778.1 19 SAKKKKAVKVLATEVSSNSTPLETSQPNGTSHSINGDGPH 58
                5799********************************9755 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.1
      GcnA_N   6 tekqekavelLekqlsL 22 
                 te qe a + Le+ l L
  KHJ30778.1 171 TEAQETAAKHLEESLLL 187
                 78899999999988765 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.2
      GcnA_N  31 qsdqasirikGeeGdyql 48 
                 ++++   +++ ++G+yq+
  KHJ30778.1 302 STENMPSQVNSQHGSYQI 319
                 5566667999******97 PP

>> GDPD  Glycerophosphoryl diester phosphodiesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.7   1.9e-05      0.11      60     133 ..      91     163 ..      59     264 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.9e-05
                 GGS-HHHHHTSTECCTTCCCCSCCCSSGCCB...BHHHHHHHHHHCCSEEEEEEECCCCCCCHHHHHHTCHHHC CS
        GDPD  60 kdltleelkrldkiakenkaqlsenrvrlefpfptleevlkkpqnvglnieikipmlseakeeeelqivkeilk 133
                  d tl+el +++ki + +kaq+ +++  l+ ++++lee ++   +++++i ik++ ++ea ee++++i+++ l+
  KHJ30778.1  91 PDKTLDELVTARKINADQKAQVLKKPA-LQASLVQLEEQVAQYIKLDAEIKIKYQKEKEALEEKLKEIARKELE 163
                 489***********9********9998.99**********9777777777888888888877777776665554 PP

>> TFIIA_gamma_N  Transcription initiation factor IIA, gamma subunit, helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00011      0.65      16      38 ..      93     115 ..      92     115 .. 0.93

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00011
  TFIIA_gamma_N  16 daLDeliqegkIspqlamkVLeq 38 
                     +LDel++++kI+ +   +VL++
     KHJ30778.1  93 KTLDELVTARKINADQKAQVLKK 115
                    59******************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1826  (0.101846); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3176.90
//
Query:       KHJ30779.1  [L=512]
Description: putative sir2 family histone deacetylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.9e-27   94.5   0.0    2.3e-26   92.8   0.0    1.9  1  SIR2      Sir2 family
  ------ inclusion threshold ------
       0.09   12.8   0.7       0.16   12.0   0.7    1.4  1  DUF1451   Zinc-ribbon containing domain


Domain annotation for each model (and alignments):
>> SIR2  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.8   0.0   2.5e-30   2.3e-26       1     175 [.     119     332 ..     119     334 .. 0.81

  Alignments for each domain:
  == domain 1  score: 92.8 bits;  conditional E-value: 2.5e-30
                 -GGGGGGGT---SSSTTSHHHHSCHHH.HSS.HHHHHHHHHHHHH....HHHHHHHHHHCC..TSS--HHHHHHHHHHHTTCEEEEEES-SSSHHHH.. CS
        SIR2   1 GAGiStesGipdfRskeGlyaklakee.las.pealfskkllvee....vfyniarellae..eaepnaaHkalkklekkgkllrliTQNiDgLekk.. 89 
                 GAGiS+++GipdfRs++Gl++ l+ +  l++  ++lf+ ++ +++     f  ++rel ++  +++p++ H++l++l ++g+llrl+TQN+Dg++ +  
  KHJ30779.1 119 GAGISVSAGIPDFRSSTGLFKTLRGDFkLKTsGKQLFDADVYRSNdatsSFHAMVRELSRKtkNVKPTPFHDMLATLAEEGRLLRLYTQNVDGIDVRiq 217
                 9*********************9987655441456777776666668889******999987899****************************886522 PP

                 ..TT-S..........SEEETTEEEEEEEETTTSBEEECCGGHCHHHCCTT.B-TTTCC................BEEEEE--CTSB-S.HHHHHHHH. CS
        SIR2  90 ..aGsk..........kvvelHGslakakcvkcekkldkeelqeeieaekvpecekcgk................llkpdvvfFGealp.dklkklie. 158
                   a  +          k ++lHG l k+ c+kc++  d ++   e    + p c++c++                 l+p++ ++ e+ p +    +++ 
  KHJ30779.1 218 plAT-NvplnvkgpwpKAIQLHGGLGKMVCSKCSHLADFDASLFEGP--TAPPCSQCEEhegvrkaaglrshgvgRLRPRILLYNEHNPdEDAIGAVSf 313
                 2222.1234455777899*****************999977665544..4588999988889*************************997555444443 PP

                 .HHHH.-SEEEEES--STS CS
        SIR2 159 .kvee.adlllviGtSlkV 175
                  ++++  d ++v+GtSl+V
  KHJ30779.1 314 aDINKgPDAVIVVGTSLQV 332
                 6777636***********9 PP

>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.7   1.8e-05      0.16     111     146 ..     240     279 ..     238     280 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.8e-05
     DUF1451 111 glGtlvCekCgkelalkkt....eeippCpkCgateFrRe 146
                 glG++vC kC +  +++ +     + ppC++C+++e  R+
  KHJ30779.1 240 GLGKMVCSKCSHLADFDASlfegPTAPPCSQCEEHEGVRK 279
                 79**********98887642222689*******9997775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       660  (0.0368119); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3487.52
//
Query:       KHJ30780.1  [L=1031]
Description: putative intracellular protein transport-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.01   15.8   0.3       0.01   15.8   0.3    3.2  4  DUF1110          Protein of unknown function (DUF1110)
      0.094   12.6   0.1      0.094   12.6   0.1    6.1  8  Pox_A_type_inc   Viral A-type inclusion protein repeat
       0.29   11.1   0.0       0.29   11.1   0.0    4.2  4  Dynein_attach_N  Dynein attachment factor N-terminus


Domain annotation for each model (and alignments):
>> DUF1110  Protein of unknown function (DUF1110)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.41   2.4e+03      10      30 ..     454     474 ..     418     490 .. 0.67
   2 ?   -2.0   0.0      0.49   2.9e+03       7      69 ..     689     749 ..     682     754 .. 0.75
   3 ?   -1.8   0.2      0.43   2.6e+03      20      63 ..     834     879 ..     818     910 .. 0.54
   4 ?   15.8   0.3   1.7e-06      0.01      41      84 ..     944     987 ..     915    1017 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.41
     DUF1110  10 frerVvevaervesvrekLaa 30 
                 + er++e ++ +e+ r++L +
  KHJ30780.1 454 ASERIQELENTCEELRKRLSE 474
                 345666666666666666655 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.49
     DUF1110   7 karfrerVvevaervesvrekLaaaearleapmrvadeeaaaaardriqlvlgaLedaSrdLa 69 
                 k +f+e  +e +  +e++++++++ ++ l +  +v + +  +   + i lv ++Le   rdL 
  KHJ30780.1 689 KFKFKENLTELKYELERAEQEIVKLKKLLMLEKHVSQLSRKRP-MSGI-LVSESLEHSYRDLQ 749
                 6689999999999999999999999999999999998554443.3445.67777777777765 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.43
     DUF1110  20 rvesvrekLaaaear..leapmrvadeeaaaaardriqlvlgaLed 63 
                 + ++vr++L +++a     + m   +e++ +   ++i+ +++  + 
  KHJ30780.1 834 LAVQVRQQLNTNAALrhRLTSMIECEEKEQELSSEKIKYLQDRVKT 879
                 4555555555443322122333333334444445555555555444 PP

  == domain 4  score: 15.8 bits;  conditional E-value: 1.7e-06
     DUF1110  41 vadeeaaaaardriqlvlgaLedaSrdLalAmslmkaAellalr 84 
                 va+    a+ r++i  +  aL da +++a  +s m+aA++ +l+
  KHJ30780.1 944 VAEDIKVAQLRQKISELEKALSDADQEIAKVVSHMNAAQIQVLN 987
                 5566677889****************************986663 PP

>> Pox_A_type_inc  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.2      0.59   3.5e+03      10      19 ..     324     333 ..     324     333 .. 0.85
   2 ?   -2.7   0.0       1.1   6.4e+03       2       9 ..     351     358 ..     351     359 .. 0.83
   3 ?   -1.2   0.1      0.38   2.2e+03       8      15 ..     456     463 ..     456     464 .. 0.89
   4 ?   -2.3   0.4      0.79   4.7e+03       8      14 ..     610     616 ..     610     618 .. 0.84
   5 ?   -3.2   0.0       1.6   9.4e+03      13      20 ..     647     654 ..     643     656 .. 0.67
   6 ?   -0.5   0.1      0.21   1.3e+03       1      10 [.     666     675 ..     666     678 .. 0.89
   7 ?   -2.4   0.1      0.87   5.2e+03       6      17 ..     873     884 ..     870     884 .. 0.88
   8 ?   12.6   0.1   1.6e-05     0.094       4      20 ..     951     967 ..     950     968 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.59
  Pox_A_type_inc  10 IsDLErqLse 19 
                     ++D E++L e
      KHJ30780.1 324 VEDMEKELKE 333
                     68******76 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.1
  Pox_A_type_inc   2 EmsrlRsR 9  
                     E++rl+ +
      KHJ30780.1 351 EVDRLKAE 358
                     9****965 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.38
  Pox_A_type_inc   8 sRIsDLEr 15 
                     +RI +LE+
      KHJ30780.1 456 ERIQELEN 463
                     69*****7 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 0.79
  Pox_A_type_inc   8 sRIsDLE 14 
                     +RI+D++
      KHJ30780.1 610 ERIRDIK 616
                     6****98 PP

  == domain 5  score: -3.2 bits;  conditional E-value: 1.6
  Pox_A_type_inc  13 LErqLseC 20 
                     LE +L+++
      KHJ30780.1 647 LETELEKA 654
                     77788776 PP

  == domain 6  score: -0.5 bits;  conditional E-value: 0.21
  Pox_A_type_inc   1 rEmsrlRsRI 10 
                     rE+ +lRs++
      KHJ30780.1 666 REVKQLRSEV 675
                     8*******97 PP

  == domain 7  score: -2.4 bits;  conditional E-value: 0.87
  Pox_A_type_inc   6 lRsRIsDLErqL 17 
                     l++R+  LE qL
      KHJ30780.1 873 LQDRVKTLEDQL 884
                     89****9**998 PP

  == domain 8  score: 12.6 bits;  conditional E-value: 1.6e-05
  Pox_A_type_inc   4 srlRsRIsDLErqLseC 20 
                      +lR +Is+LE+ Ls++
      KHJ30780.1 951 AQLRQKISELEKALSDA 967
                     58************995 PP

>> Dynein_attach_N  Dynein attachment factor N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1       1.4   8.7e+03      25      40 ..     424     439 ..     420     453 .. 0.70
   2 ?   11.1   0.0   4.8e-05      0.29      26      53 ..     554     581 ..     532     597 .. 0.82
   3 ?   -2.2   0.2      0.71   4.2e+03      22      28 ..     638     644 ..     620     657 .. 0.50
   4 ?    3.3   0.5     0.014        81       4      39 ..     846     881 ..     844     883 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.4
  Dynein_attach_N  25 daKlrAVeqkvksYee 40 
                       aK++ +eqk ++ ee
       KHJ30780.1 424 RAKCKQLEQKIQNLEE 439
                      5666666666666555 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 4.8e-05
  Dynein_attach_N  26 aKlrAVeqkvksYeeFrdiVkaahLkPl 53 
                      +K+  ++ + k+++ F +iV+a +++ +
       KHJ30780.1 554 KKKTEIHDQIKTFDKFSQIVEATDIRDM 581
                      5777799****************99866 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.71
  Dynein_attach_N  22 rendaKl 28 
                      ren + +
       KHJ30780.1 638 RENQKHI 644
                      4444333 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.014
  Dynein_attach_N   4 kkLekelqeaiekdekyqrendaKlrAVeqkvksYe 39 
                      ++L+  l++ ie +ek q   + K++ ++ +vk+ e
       KHJ30780.1 846 AALRHRLTSMIECEEKEQELSSEKIKYLQDRVKTLE 881
                      5899****************************9977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1031 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2948  (0.164426); expected 358.6 (0.02)
Passed bias filter:                      558  (0.0311228); expected 358.6 (0.02)
Passed Vit filter:                       111  (0.00619109); expected 17.9 (0.001)
Passed Fwd filter:                        63  (0.00351386); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.76u 0.34s 00:00:02.10 Elapsed: 00:00:00.61
# Mc/sec: 5082.59
//
Query:       KHJ30781.1  [L=277]
Description: putative la domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-18   66.9   0.0    1.9e-18   66.3   0.0    1.4  1  La        La domain
    1.1e-08   34.8   0.0    2.6e-08   33.6   0.0    1.6  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> La  La domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.3   0.0   2.1e-22   1.9e-18       1      58 [.      35      91 ..      35      92 .. 0.97

  Alignments for each domain:
  == domain 1  score: 66.3 bits;  conditional E-value: 2.1e-22
                HHHHHHHHHHTT-TTT-HHHHHHHTTSTTS---HHHHHTSSHHHHHHSSHHHHHHHHH CS
          La  1 ilkQvEfYFSdeNLpkDkFLrkkmdkdpegwVplsliasfkrmkkltkdveliaealr 58
                i++QvEfYF+d+NLp+Dk+L+ ++  +++  Vp++ i++f rm++++ +++ i++al+
  KHJ30781.1 35 IRAQVEFYFGDANLPTDKYLWGLTGGSSNIPVPIKKICEFGRMRRFS-PYSSIVSALK 91
                899********************************************.********98 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.0   2.9e-12   2.6e-08      14      62 ..     142     189 ..     137     194 .. 0.93

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 2.9e-12
                 HHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTE CS
       RRM_1  14 eLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngk 62 
                 +++++F ++Gpi+ ++l r++++  kg  fVeF+ +e Aek l+ l+ k
  KHJ30781.1 142 DIEAFFAPYGPINAVRLRRTNKKLFKGSVFVEFAEEELAEKFLN-LQSK 189
                 899***************************************99.8776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       764  (0.0426125); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2047.16
//
Query:       KHJ30782.1  [L=173]
Description: putative ubiquitin-conjugating enzyme e2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-36  124.5   0.0    2.6e-36  124.3   0.0    1.0  1  UQ_con     Ubiquitin-conjugating enzyme
  ------ inclusion threshold ------
      0.049   13.9   0.3      0.072   13.4   0.2    1.6  1  RWD        RWD domain
       0.11   12.2   0.2       0.17   11.6   0.2    1.5  1  Prok-E2_B  Prokaryotic E2 family B
       0.18   11.5   0.0       0.25   11.0   0.0    1.2  1  UFC1       Ubiquitin-fold modifier-conjugating enzyme 1


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.3   0.0   5.9e-40   2.6e-36      10     138 ..      19     164 ..       9     166 .. 0.88

  Alignments for each domain:
  == domain 1  score: 124.3 bits;  conditional E-value: 5.9e-40
                 HHSTTTTEEEEEEETTEECEEEEEEEB.TTS.TTTTEEEEEEEE--TTTTTS--EEEESST-.SCTTBETTSBB-CGGGS............TTT--TT CS
      UQ_con  10 akkkpsgisaklvddenlfewkvlikgpedt.pYeggvFklelefpedYPlkpPkvkfvtki.fHPnvdksGevcldiLk............eekWspa 94 
                 + k  +gis +l +++++few+v+++  +d+ +Y gg F+ ++ fp+dYPl+pP+++f+t+i fHPnv+++G++c++iL+             e+Wsp+
  KHJ30782.1  19 NAKDIPGISCGLLNNNSVFEWEVMLMISDDCkYYGGGNFRCHFFFPQDYPLSPPSLTFKTPIpFHPNVYPDGRLCISILHppgedqygyesaAERWSPV 117
                 4677899*******99***********9998256789**********************98759************************9999888**** PP

                 SHHHHHHHHHHHHHHS--TTS-SSHHHHHHHHHTHH...HHHHHHHH CS
      UQ_con  95 ltlesvllsiqsLlaepnpesplnkeaakllkkdre...eykkkvke 138
                 +t e++lls++sLl++pn+esp+n+eaa+l++++++   e++k+ ++
  KHJ30782.1 118 QTPETILLSVISLLHSPNDESPANIEAATLWREEKSggnEFRKRCRK 164
                 ********************************996433377777765 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   1.6e-05     0.072      54      77 ..      56      79 ..      16     133 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.6e-05
                EEEEEEEE-SSTTSS--EEEEEEC CS
                xxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD 54 slkleiklpeeYPeeaPiislsst 77
                ++++++ +p++YP ++P ++++++
  KHJ30782.1 56 NFRCHFFFPQDYPLSPPSLTFKTP 79
                7999*****************987 PP

>> Prok-E2_B  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   3.7e-05      0.17      34      78 ..      53      94 ..      33     152 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.7e-05
   Prok-E2_B 34 sggtvdlrlvypdsfpllppavflqdpeqlkllpHintfggaLCl 78
                 gg ++ ++ +p ++pl+pp+   + p   +  p +++ +g LC 
  KHJ30782.1 53 GGGNFRCHFFFPQDYPLSPPSLTFKTPI--PFHPNVYP-DGRLCI 94
                799******************9999998..66799999.999996 PP

>> UFC1  Ubiquitin-fold modifier-conjugating enzyme 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   5.5e-05      0.25      36     115 ..      15      97 ..       8     104 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 5.5e-05
        UFC1  36 kyveenkesdndwfklesnkegtkwkGkcwyvhelkky...efdlefdipvtypataleialpeldgktakmyrgGkicltih 115
                 ky+++ k+       l  n++  +w+    +  ++k y   +f+ +f  p+ yp +++ ++++        +y +G++c++i 
  KHJ30782.1  15 KYMQNAKDIPGISCGLLNNNSVFEWEVMLMISDDCKYYgggNFRCHFFFPQDYPLSPPSLTFKTPIPFHPNVYPDGRLCISIL 97 
                 666666666666666777788888888777777777776667**********************999************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       227  (0.0126611); expected 358.6 (0.02)
Passed bias filter:                      214  (0.011936); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1344.60
//
Query:       KHJ30783.1  [L=415]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1384  (0.0771934); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3078.83
//
Query:       KHJ30784.1  [L=246]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.076   13.1   0.7       0.15   12.2   0.7    1.4  1  Toxin_27  Scorpion calcine family


Domain annotation for each model (and alignments):
>> Toxin_27  Scorpion calcine family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.7   8.1e-06      0.15      17      30 ..       4      19 ..       2      21 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 8.1e-06
    Toxin_27 17 CsKKCKR..RGTNiEK 30
                C+ KCK   RGTN EK
  KHJ30784.1  4 CGSKCKIrpRGTNLEK 19
                9****95247*****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       314  (0.0175135); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1885.33
//
Query:       KHJ30785.1  [L=508]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       724  (0.0403815); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3781.23
//
Query:       KHJ30786.1  [L=151]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       848  (0.0472977); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1097.66
//
Query:       KHJ30787.1  [L=332]
Description: putative geranylgeranyltransferase beta subunit protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-56  187.8  13.8    2.4e-14   52.8   0.0    6.1  6  Prenyltrans      Prenyltransferase and squalene oxidase repea
      0.004   16.3   0.0        7.9    5.5   0.0    3.8  4  SQHop_cyclase_N  Squalene-hopene cyclase N-terminal domain
     0.0048   16.0   0.4      0.011   14.9   0.1    1.7  1  SQHop_cyclase_C  Squalene-hopene cyclase C-terminal domain
  ------ inclusion threshold ------
       0.17   11.7   0.6        1.4    8.8   0.0    2.3  2  Imm17            Immunity protein 17


Domain annotation for each model (and alignments):
>> Prenyltrans  Prenyltransferase and squalene oxidase repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.3     0.022        97      33      43 ..      49      59 ..      48      60 .. 0.88
   2 !   32.7   0.0     1e-11   4.5e-08       4      44 .]      68     108 ..      67     108 .. 0.94
   3 !   25.7   0.0   1.6e-09   7.1e-06       7      43 ..     125     162 ..     122     163 .. 0.94
   4 !   44.8   0.1   1.7e-15   7.5e-12       2      44 .]     169     211 ..     168     211 .. 0.98
   5 !   34.2   0.2   3.3e-12   1.5e-08       2      44 .]     217     259 ..     216     259 .. 0.96
   6 !   52.8   0.0   5.3e-18   2.4e-14       1      44 []     264     308 ..     264     308 .. 0.97

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.022
                 HHHHHHHHHHC CS
  Prenyltrans 33 tywalaaLall 43
                  yw+l+aL+ll
   KHJ30787.1 49 LYWGLTALHLL 59
                 59*******98 PP

  == domain 2  score: 32.7 bits;  conditional E-value: 1e-11
                  HHHHHHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHHHHCT CS
  Prenyltrans   4 ekavefLlscQnedGGwggrpgsesdtyytywalaaLallG 44 
                  ++ + f+lsc  e GG++  p++++++ yt+ a+++La l+
   KHJ30787.1  68 QETISFVLSCLTERGGFSAAPNHDAHLLYTCSAIQILATLD 108
                  67899*********************************885 PP

  == domain 3  score: 25.7 bits;  conditional E-value: 1.6e-09
                  HHHHHHHSH.TTS-BBSSTTSSBBHHHHHHHHHHHHHC CS
  Prenyltrans   7 vefLlscQn.edGGwggrpgsesdtyytywalaaLall 43 
                    ++ + Qn e G w+g+ ++e dt++ y al+aL+ll
   KHJ30787.1 125 GKWIANLQNkETGTWAGDEWGEEDTRFLYAALNALSLL 162
                  57*******************99*************98 PP

  == domain 4  score: 44.8 bits;  conditional E-value: 1.7e-15
                  HHHHHHHHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHHHHCT CS
  Prenyltrans   2 dvekavefLlscQnedGGwggrpgsesdtyytywalaaLallG 44 
                  dv+kav+++ sc n dGG+g  pg es++++ + +l aL++lG
   KHJ30787.1 169 DVDKAVDYIVSCANFDGGYGTAPGAESHSGQIFACLGALSILG 211
                  89****************************************8 PP

  == domain 5  score: 34.2 bits;  conditional E-value: 3.3e-12
                  HHHHHHHHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHHHHCT CS
  Prenyltrans   2 dvekavefLlscQnedGGwggrpgsesdtyytywalaaLallG 44 
                  d++k+  +L  +Q + GG++grp++  d++y++w+ ++L ++G
   KHJ30787.1 217 DKNKLGGWLSERQVDAGGLNGRPEKLEDVCYSWWVGCSLTMIG 259
                  899**********************77**************98 PP

  == domain 6  score: 52.8 bits;  conditional E-value: 5.3e-18
                  HHHHHHHHHHHHHSH.TTS-BBSSTTSSBBHHHHHHHHHHHHHCT CS
  Prenyltrans   1 idvekavefLlscQn.edGGwggrpgsesdtyytywalaaLallG 44 
                  id +k++ef+l+cQ+ e+GG+++rpg  +d+++t+++la+L+llG
   KHJ30787.1 264 IDGKKLAEFILRCQDtESGGFADRPGDMVDVFHTLFGLAGLSLLG 308
                  5789****************************************8 PP

>> SQHop_cyclase_N  Squalene-hopene cyclase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.033   1.5e+02      36      80 ..      56     100 ..      27     104 .. 0.89
   2 !    3.6   0.0    0.0064        29      38      88 ..     161     211 ..     124     221 .. 0.70
   3 ?    1.4   0.0      0.03   1.3e+02      37      78 ..     208     249 ..     203     263 .. 0.81
   4 !    5.5   0.0    0.0018       7.9      46      90 ..     265     310 ..     250     314 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.033
  SQHop_cyclase_N  36 reflgeddeeeeekiakylrsqqredGgWelypggpgdlsttvea 80 
                       ++l++ d+  ++++  +++s  +e Gg++ +p+++++l  t  a
       KHJ30787.1  56 LHLLQRPDALPRQETISFVLSCLTERGGFSAAPNHDAHLLYTCSA 100
                      57788889999999**********************999998766 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.0064
  SQHop_cyclase_N  38 flgeddeeeeekiakylrsqqredGgWelypggpgdlsttveaYlALkllG 88 
                      +l+  +  + +k++ y+ s  + dGg++++pg +++      +  AL +lG
       KHJ30787.1 161 LLKMLHLVDVDKAVDYIVSCANFDGGYGTAPGAESHSGQIFACLGALSILG 211
                      455555567899999***************998876555555555666665 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.03
  SQHop_cyclase_N  37 eflgeddeeeeekiakylrsqqredGgWelypggpgdlsttv 78 
                       +lg+ d+ +++k+  +l ++q + Gg +  p++  d+  + 
       KHJ30787.1 208 SILGRLDTVDKNKLGGWLSERQVDAGGLNGRPEKLEDVCYSW 249
                      5789999999*****************998888888887775 PP

  == domain 4  score: 5.5 bits;  conditional E-value: 0.0018
  SQHop_cyclase_N  46 eeekiakylrsqqr.edGgWelypggpgdlsttveaYlALkllGds 90 
                      + +k+a+++++ q  e Gg++  pg+  d++ t     +L llG++
       KHJ30787.1 265 DGKKLAEFILRCQDtESGGFADRPGDMVDVFHTLFGLAGLSLLGYP 310
                      568999*****999899*************************9985 PP

>> SQHop_cyclase_C  Squalene-hopene cyclase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1   2.4e-06     0.011     149     229 ..     104     190 ..      88     205 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.4e-06
                      HHHHT--TTSHHHHHH....H.HHHHHHS-TT.S----.SSBSSHHHHHHHHHHHHHHTT--TTSHHHHHHHHHHHTT--TTSSBB-- CS
  SQHop_cyclase_C 149 laqlgeeedsealkra....v.eylkkeqepd.GsWfG.rWGvnyiyGtwsvlsalaavgedleepvirkavdWlksvqnedGGWGes 229
                      la+l+  ++ ++ +r+    v +++ + q+++ G+W G  WG +     +++l+al+ +++ +    + kavd+++s  n dGG+G +
       KHJ30787.1 104 LATLDALNELDVKNRGgkltVgKWIANLQNKEtGTWAGdEWGEEDTRFLYAALNALSLLKMLHL-VDVDKAVDYIVSCANFDGGYGTA 190
                      44444443333333321111226777777654399*9956998765555566666665555443.4589****************975 PP

>> Imm17  Immunity protein 17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   0.00032       1.4      19      52 ..     126     159 ..     120     167 .. 0.87
   2 ?    0.5   0.2      0.12   5.4e+02       1      13 [.     200     211 ..     200     215 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00032
       Imm17  19 dWfftprgakngrfwv.enfGrkgaRifygilgli 52 
                 +W+ + +++ ++ +w  + +G++  R++y+ l ++
  KHJ30787.1 126 KWIANLQNK-ETGTWAgDEWGEEDTRFLYAALNAL 159
                 8********.7788999************998766 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.12
       Imm17   1 Lfvallgllsllg 13 
                 +f a+lg+ls+lg
  KHJ30787.1 200 IF-ACLGALSILG 211
                 56.********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2385.81
//
Query:       KHJ30788.1  [L=1133]
Description: putative dna mismatch repair protein msh3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-69  231.9   0.3    1.2e-68  230.9   0.3    1.5  1  MutS_V    MutS domain V
    1.4e-35  123.3   0.2    1.4e-35  123.3   0.2    2.9  2  MutS_III  MutS domain III
    1.6e-27   96.0   0.0    4.1e-27   94.7   0.0    1.8  1  MutS_I    MutS domain I
    1.4e-08   35.2   0.1    3.9e-08   33.7   0.1    1.9  1  MutS_II   MutS domain II
    1.6e-06   28.3   0.0      1e-05   25.7   0.0    2.4  1  MutS_IV   MutS family domain IV
  ------ inclusion threshold ------
        3.2    8.6   6.0         26    5.7   6.0    2.5  1  DUF1754   Eukaryotic family of unknown function (DUF1754)


Domain annotation for each model (and alignments):
>> MutS_V  MutS domain V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  230.9   0.3   3.9e-72   1.2e-68       2     188 .]     890    1096 ..     889    1096 .. 0.95

  Alignments for each domain:
  == domain 1  score: 230.9 bits;  conditional E-value: 3.9e-72
                  EEE-STTSSHHHHHHHHHHHHHHHHHT--BSSSEEEEE--SEEEEEE--------SS-HHHHHHHHHHHHHTT--TTSEEEEESTS-SS-HHHHHHH CS
      MutS_V    2 litGpnmaGkstylrqvalivllaqiGsfvpaekaeisivdkiftRvgasDdlakgkstFmvEmlEtasilknatekslvilDElGRGtstydGlai 98  
                   itGpnm+Gks+y+r val+v++aqiGs++p+++a+i+++d i+tR+ga D+l + +stF vE++Etasilk+at++slvilDElGRGtst dG+ai
  KHJ30788.1  890 CITGPNMGGKSSYVRHVALLVIMAQIGSYIPCDYASIGLLDGIYTRMGAYDSLFTRQSTFQVELSETASILKSATNRSLVILDELGRGTSTHDGVAI 986 
                  69*********************************************************************************************** PP

                  HHHHHHHHHHTT--EEEEEES-GGGGGHH...HHSTTEEEEEEEEE.................EETTEEEEEEEEEES--SS--HHHHHHHTT--HH CS
      MutS_V   99 alavaeyllekikaktlfatHyheltkla...ekleevknlhlavk.................eeeedivflykvkegaaeksyGikvaklaglPes 175 
                  a + +e++++++++ +lf tHy++l+++a   e+ +++kn+h++ +                  ++e+i+fly++ eg+a +syG++va+la +P+ 
  KHJ30788.1  987 AASTLEWIVREKECICLFITHYQSLATIArifETDSALKNVHMKFEskskaslltdsnidreiIDDEEITFLYEIGEGTAYRSYGLNVARLAHVPKI 1083
                  ************************98876111456779******9999************988889******************************* PP

                  HHHHHHHHHHHTT CS
      MutS_V  176 vverArevlkele 188 
                  v+e+A ++ +e+e
  KHJ30788.1 1084 VLETAAKKSHEME 1096
                  *******999986 PP

>> MutS_III  MutS domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   2.6      0.94   2.8e+03     164     164 ..     159     159 ..      23     503 .. 0.71
   2 !  123.3   0.2   4.7e-39   1.4e-35       1     191 []     534     835 ..     534     835 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.94
                 H CS
                 x RF
    MutS_III 164 l 164
                 +
  KHJ30788.1 159 V 159
                 1 PP

  == domain 2  score: 123.3 bits;  conditional E-value: 4.7e-39
                 HHHHHTTSSS-TTS.SSSS-HHHHH---SSHHHHHHHHHHHH--BS-HHHHHHHHHHHHHT.....TT.HHHHHHHHTT--.-HHHHHHHHHTT---HH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx RF
    MutS_III   1 aTlrnLeilenlrggskegsLlgvldrTvTamGaRlLrewllqPltdleeInaRldaVeele...neelreelrellrrlp.DleRllsrislgkakar 95 
                 +Tl++Lei+ n+++ +++gsL++ ld+T T++G+RlLr+w+ +Pl+d+ +I++R +aVeel+   ++   +++++llr+++ DleR l ri++gk++  
  KHJ30788.1 534 NTLTSLEIFLNQTDHKEKGSLFWSLDKTQTRFGQRLLRKWVGRPLLDKGQIEERVNAVEELKngyQTPRVDKIHSLLRNIKcDLERSLIRIYYGKCTRP 632
                 7*******666444599*******************************************9856544446667788999999**************989 PP

                 HHHHHHHHHHHHHTTTTT---SSTHHHHHHHHHHHHHHHB-SS--SSGGGS--B-T........................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................................... RF
    MutS_III  96 dlkallealkaleelvallekeklaeseeeslaelleeaideeplalekegedlra........................................... 151
                 +l  ll++++++++   + ++ + a  + +s  +ll++ai + p+ ++   e+l +                                           
  KHJ30788.1 633 ELFMLLKTFQTIANEYIHIKTPSDA--NFTS--SLLSNAIATLPSINKIIIEFLSKvsaepalnddkyaffhpdhendlitnhkmgiaaveqeldayrs 727
                 9999999999877554444333222..2212..455544444444444444444445555555556889999999999999999*************** PP

                 ....................................................................HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH CS
                 ....................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III 152 ....................................................................iealeqelfqelleeveealerlrrlaeala 182
                                                                                     + a+++++f+++l+++++++  +r+++ ala
  KHJ30788.1 728 sassvlgiskrlsyitsagveylfeihsrdlksvpaswikvsgtkfisrfhtpevikmlgernlhkesLSAACDAAFSDFLSQISKHFIPIRDTILALA 826
                 *****************************************************************99988899************************** PP

                 HHHHHHHHH CS
                 xxxxxxxxx RF
    MutS_III 183 eLDvllSlA 191
                 +LD+l Sl+
  KHJ30788.1 827 TLDCLYSLS 835
                 *******95 PP

>> MutS_I  MutS domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.7   0.0   1.4e-30   4.1e-27       1     112 [.     208     333 ..     208     334 .. 0.93

  Alignments for each domain:
  == domain 1  score: 94.7 bits;  conditional E-value: 1.4e-30
                 HHHHHHHHCCCHH-TTCEEEEEETTEEEEECHHHHHHHHHCSSSSTT.E........SSSSC.EEEEEEEHHHHHHHHHHHHHTT-EEEEEEE-S-HHH CS
      MutS_I   1 tplmkqylelkkkykdavlffrvGdfYelfgeDAviaareleitltkrk........kssekeipmagvPehalekylrkLvekgykVavveqtetpae 91 
                 tpl+ q+le+k+k  d++l+++vG++++lfgeDA iaa++l+i+++  k        + +  ++++a++P h+l+ ++++L+++g+k+ vv q et+a 
  KHJ30788.1 208 TPLEIQFLEIKRKRLDTILIVEVGYKFKLFGEDARIAAKVLSIVCIPGKlrydehpsEAHLTRFASASIPVHRLSIHAKRLIQAGHKIGVVRQIETAAL 306
                 89********************************************99999999986555556************************************ PP

                 H......S.S--EEEEEEEBTTC-TTS CS
      MutS_I  92 k......kgvvkrevvrviTpGtltde 112
                 k      ++ + r++v+++T+Gt++d+
  KHJ30788.1 307 KkagdnrNAPFTRKLVNIYTKGTYIDD 333
                 *66666546**************9986 PP

>> MutS_II  MutS domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.1   1.3e-11   3.9e-08       9     130 ..     362     511 ..     352     519 .. 0.69

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 1.3e-11
                 E......TTTSE.EEEEEEETTTTEEEEEEEEE...-HHHHHHHHHH-ESEEEEESS-SCCCH....HHHHHCHCTTT-EEEEESCCCCSHCCH..HHH CS
     MutS_II   9 k......regrr.vGlafiDlstgefvvsefed...feeleaeLsrlsPkElllpedlsesta....eeessklrelrsrvgvretvefeseka..ser 91 
                 +       +++  +G+  +++stge+  + f d   ++e+e++L++l+P+E+l+  dl + t        +s++    +r++v + +  e + a     
  KHJ30788.1 362 SnpknlnTDDKVnIGVLAVQPSTGEIIHDNFDDdflRQEFETRLMHLAPCEILIVGDLTNTTKklikHLSCSSINLFGDRIRVEKIMRGETSAAesFSH 460
                 2555566555666*********************************************99888999756666666666666666666555444423555 PP

                 CHHHB--STTTTTTT..............GGG-HHHHHHHHHHHHHCCCCCSC CS
     MutS_II  92 leedfsvedldgfgl..............ekekklalaAlgalisYleetqke 130
                 ++++++ ++  +                    +++ ++ l+a i +lee+ +e
  KHJ30788.1 461 VHQFYAQNLKNHN-TedegqeqilldkvlNLSENVTIC-LSAMITHLEEYGLE 511
                 5566633332222.223334556667766666777777.88888888887766 PP

>> MutS_IV  MutS family domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   3.5e-09     1e-05      15      83 ..     717     786 ..     706     794 .. 0.94

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 3.5e-09
                 HHHHHHHHHHCCCCCCCT-.TTBEECCCSSSEEEEEE-TCCCTTT--SEEEEEECTCEEEEECCCHHHHH CS
     MutS_IV  15 elekeleeleekereklgi.kslkveynkvlGyylevtrseakkvpkefirlqtlknseryttaelkkle 83 
                  +e+el+++ ++ ++ lgi k l++  ++ + y++e+   + k+vp+ +i+++ +k   r+ t+e++k+ 
  KHJ30788.1 717 AVEQELDAYRSSASSVLGIsKRLSYITSAGVEYLFEIHSRDLKSVPASWIKVSGTKFISRFHTPEVIKML 786
                 689***************************************************************9986 PP

>> DUF1754  Eukaryotic family of unknown function (DUF1754)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   6.0    0.0087        26      55      97 ..     147     223 ..      59     224 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0087
     DUF1754  55 a..................................esekdkeeeeddseekkekeeeqenlTeAErkfeevrkKrlk 97 
                 +                                  ++++d+e+ +    + k+k ++  nlT+ E++f e ++Krl+
  KHJ30788.1 147 ErerqtelhqkwvskmgktnlrrnlarfdsikeidDEKSDEENDDIMVPKVKKKGAKTGNLTPLEIQFLEIKRKRLD 223
                 03333334444566666777777888888888873444444444444556777888889****************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       747  (0.0416643); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.78u 0.31s 00:00:01.09 Elapsed: 00:00:00.46
# Mc/sec: 7344.08
//
Query:       KHJ30789.1  [L=510]
Description: putative type-2 protein geranylgeranyltransferase subunit beta protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3835.32
//
Query:       KHJ30790.1  [L=249]
Description: hypothetical protein EV44_g4739 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-30  104.0   0.0    5.6e-30  103.3   0.0    1.4  1  Mhr1      Transcriptional regulation of mitochondrial recombi


Domain annotation for each model (and alignments):
>> Mhr1  Transcriptional regulation of mitochondrial recombination
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.3   0.0   3.2e-34   5.6e-30       1      84 [.      39     124 ..      39     125 .. 0.98

  Alignments for each domain:
  == domain 1  score: 103.3 bits;  conditional E-value: 3.2e-34
        Mhr1   1 geqiyvfrnletgqVvYSltrvleknkalkqlpfvgkkqvpaklRkDlWkplavvefpkg..eagvsvyqkLrelrklreleweke 84 
                 g++i++f+++++++V YSl+r+l+++++l+ +pf+gkk+vp++lRkD+W p+a+++fpkg   +g+sv+qkLre+rk++e+ew++e
  KHJ30790.1  39 GQHIFIFSHIQKKMVAYSLKRALNNKDTLRHIPFNGKKTVPSALRKDHWLPFATIQFPKGcgPVGLSVFQKLREYRKRHEHEWGEE 124
                 79**********************************************************99*********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 1992.63
//
Query:       KHJ30791.1  [L=459]
Description: putative tyrosine phosphatase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.1e-44  150.2   2.3    9.2e-28   97.6   0.0    2.9  3  Bot1p            Eukaryotic mitochondrial regulator protein
  ------ inclusion threshold ------
        4.8    7.4   9.3        2.1    8.5   0.4    2.9  3  GED              Dynamin GTPase effector domain


Domain annotation for each model (and alignments):
>> Bot1p  Eukaryotic mitochondrial regulator protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1      0.69   6.2e+03       9      31 ..      28      52 ..      22      59 .. 0.60
   2 !   97.6   0.0     1e-31   9.2e-28       3     135 ..     135     271 ..     133     283 .. 0.90
   3 !   51.6   0.1   1.3e-17   1.2e-13      87     159 ..     286     360 ..     281     373 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.69
       Bot1p  9 psfrsepvlseelre..eIyeevak 31
                ++f ++  l+ ++r+  e+++ +  
  KHJ30791.1 28 RFFSTNMQLNRQVRMrrEMFKWINR 52
                4688999998887652256555555 PP

  == domain 2  score: 97.6 bits;  conditional E-value: 1e-31
       Bot1p   3 qPFPlNpsfrsepvlseelreeIyeevakkgksvrevSvkygvkikRveAivrLkelekkwknkgkpllkkysralekmlPl.....napekkakeenl 96 
                  PFP N+ f sepvl   l++eI+ +v+++g++vrevS+  gv++ Rv+A+vrL e+ek+wk+kgk+ + +y+++l +mlP        + +++ e+ l
  KHJ30791.1 135 MPFPANKDFISEPVLGPWLQNEIWADVMNRGLTVREVSSLRGVEMGRVAAVVRLLEVEKSWKEKGKEIADSYAETLVDMLPYtgktaLLNWSDEDEQAL 233
                 6*********************************************************************************8887744556788889* PP

       Bot1p  97 ndipvpsktassrfvpvaesepFtpvdaakvlelepaae 135
                 nd +   k +++r v   e e++ ++ a  +  l+pa++
  KHJ30791.1 234 NDAKLDAKMKAQREVKEREDENIKRKTAS-LPPLPPAQP 271
                 ***********************998664.444666665 PP

  == domain 3  score: 51.6 bits;  conditional E-value: 1.3e-17
       Bot1p  87 pekkakeenlndipvpsktassrfvpvaesepFtpvdaakvlel..epaaetlekaeevkeekesaeevteeeak 159
                 ++++ ++e++nd+pv + t +++++pv+es+ Ft++daak+++   +pa+++  ++e ++++ke  +  t ee+ 
  KHJ30791.1 286 NRRRSPHESINDLPVLKITGAQLWLPVSESRRFTRADAAKAFDSnlQPADKRVPHPELTQMHKEYLAGKTLEERA 360
                 567899************************************9888********************999988843 PP

>> GED  Dynamin GTPase effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.4   0.00024       2.1      43      80 ..      79     116 ..      38     122 .. 0.80
   2 ?   -1.4   0.0       0.3   2.7e+03      22      74 ..     208     260 ..     203     262 .. 0.73
   3 ?    3.1   1.0     0.012   1.1e+02      49      86 ..     343     380 ..     334     384 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00024
                 CCCCHHHCCTTSGGGHHHHT---SCHCCCCHHHHHHHH CS
         GED  43 slqkellakLykkedldeLLkEdeeiaekRkelkkrle 80 
                  ++++ +++L k e++++L+kE+++i+e+++   +rle
  KHJ30791.1  79 GVEERTVEHLRKVEEIKTLIKERPDIKEEKQIELNRLE 116
                 5678889**********************998777765 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.3
                 HHHHHHHHHHHHHHHTHHHHCCCCCHHHCCTTSGGGHHHHT---SCHCCCCHH CS
         GED  22 ktiadqiPkaimhllvneakeslqkellakLykkedldeLLkEdeeiaekRke 74 
                 +t+ d+ P +  + l+n + e+ q    akL  k + ++ +kE+e+   kRk+
  KHJ30791.1 208 ETLVDMLPYTGKTALLNWSDEDEQALNDAKLDAKMKAQREVKEREDENIKRKT 260
                 67778888887778888777777666667777777788888888888888875 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.012
                 HCCTTSGGGHHHHT---SCHCCCCHHHHHHHHHHHHHC CS
         GED  49 lakLykkedldeLLkEdeeiaekRkelkkrlealkkAr 86 
                 l+++ k+    + L+E++ ++++R el++r  + ++A+
  KHJ30791.1 343 LTQMHKEYLAGKTLEERAILQDQRAELERRKILQRRAN 380
                 5788999999999*************999877777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       904  (0.0504211); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3392.15
//
Query:       KHJ30792.1  [L=138]
Description: putative tata-binding protein-associated phosphoprotein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.6e-18   64.4   0.4    1.4e-17   63.7   0.1    1.5  2  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
    4.2e-06   27.1   0.1    1.7e-05   25.2   0.0    1.9  2  Histone        Core histone H2A/H2B/H3/H4
  ------ inclusion threshold ------
      0.037   14.3   0.0      0.053   13.8   0.0    1.2  1  LRAT           Lecithin retinol acyltransferase
      0.083   13.2   0.1       0.15   12.3   0.1    1.4  1  MREG           Melanoregulin
      0.098   12.7   0.0       0.16   12.0   0.0    1.4  1  Bromo_TP       Bromodomain associated
       0.12   12.4   1.3       0.17   12.0   0.3    1.7  2  YolD           YolD-like protein


Domain annotation for each model (and alignments):
>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.7   0.1   4.7e-21   1.4e-17       2      65 .]      13      79 ..      12      79 .. 0.95
   2 ?   -2.9   0.0       2.9   8.6e+03      40      49 ..      91     100 ..      87     109 .. 0.48

  Alignments for each domain:
  == domain 1  score: 63.7 bits;  conditional E-value: 4.7e-21
                   XXXHHHHHHHHHCC.TTXS-..B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF  2 eLPiarvkkImksd.pdark..iakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65
                   +LP+a+v+kI+ +  p      ++kdA++l+ ec++efi+ ++seA+ei ++e++Kti+ ehi +A+
     KHJ30792.1 13 SLPKATVQKIVSEIlPPSSGigFTKDARDLLIECCVEFITLISSEANEISERESKKTIACEHITKAL 79
                   7*************987777578*****************************************997 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.9
                    HHHHHHHHHC CS
  CBFD_NFYB_HMF  40 laseAaeick 49 
                    +++ A+e+ +
     KHJ30792.1  91 ILNVACEHKE 100
                    4444444433 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   5.6e-09   1.7e-05      57     128 ..       9      79 ..       3      82 .. 0.95
   2 ?   -1.3   0.1      0.85   2.5e+03      80      95 ..     113     128 ..     105     129 .. 0.79

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 5.6e-09
                 XXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHH CS
     Histone  57 stdlliqklpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlAr 128
                 + dl  +k+ ++++v ei +  +++++++++a ++l e +  +++ + +eAn ++++  ++Ti  ++i  A+
  KHJ30792.1   9 NDDLSLPKATVQKIVSEILP-PSSGIGFTKDARDLLIECCVEFITLISSEANEISERESKKTIACEHITKAL 79 
                 679999*************9.***********************************************9886 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.85
                 SSXEEXHHHHHHHHHH CS
     Histone  80 edlrisaeavlalqea 95 
                 e+ ++s + +la+qea
  KHJ30792.1 113 EQSGLSTDELLAMQEA 128
                 5778889999999998 PP

>> LRAT  Lecithin retinol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.8e-05     0.053      40     116 ..      20      98 ..       8      99 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.8e-05
                 ...-GCG-TCTTCTTS-B--EEEEEEEHHHHHTTSEEEE--HHHHCT----HHHHHHHHHHHTT-E-S..CGHHCHHHH CS
        LRAT  40 skieksvsnkrsvlgvllkkagVrkssleefaagdklrvneksdskaeslpneeviqrAeelvGeveY..sllsnNCEh 116
                 +ki ++  + +s +g++ + +    +++ ef    + + ne s+ ++++  + e i +A e++G+++Y  s+l+  CEh
  KHJ30792.1  20 QKIVSEILPPSSGIGFTKDARDLLIECCVEFITLISSEANEISERESKKTIACEHITKALEQLGFGDYvqSILNVACEH 98 
                 4555555556688999999999999*******************9999999999999*********9977899999**9 PP

>> MREG  Melanoregulin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   5.2e-05      0.15      56     104 ..      65     114 ..      57     129 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 5.2e-05
        MREG  56 qvrrevr.drWkkiLekLGfkkeadslLtvtksttlessrnakkarellk 104
                 + ++ +  ++  k Le+LGf + ++s+L+v+ + +++   + kka++l +
  KHJ30792.1  65 ESKKTIAcEHITKALEQLGFGDYVQSILNVACEHKEQLKGREKKANKLEQ 114
                 55555532566789******************999999988899988754 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   5.4e-05      0.16       6      73 ..      17      84 ..      13      94 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 5.4e-05
                HHHHHHHHHHHH.HHT-SEE-HHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-SS--HHHHHHHHHHTT- CS
    Bromo_TP  6 sllkvvvsqile.eaGfdsaeesaLEtLteiaqkYirelgeqaksfaehagRseptlkDvvltLqelgi 73
                ++ +++vs il  ++G   +++ a ++L e   ++i+ ++ +a++ +e++ + +   + +  +L++lg+
  KHJ30792.1 17 ATVQKIVSEILPpSSG-IGFTKDARDLLIECCVEFITLISSEANEISERESKKTIACEHITKALEQLGF 84
                5667888888862455.56888999******************************************98 PP

>> YolD  YolD-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.2   3.6e+03      77      78 ..      65      66 ..      41      82 .. 0.54
   2 ?   12.0   0.3   5.6e-05      0.17       4      35 ..      97     128 ..      96     137 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.2
        YolD 77 de 78
                ++
  KHJ30792.1 65 ES 66
                22 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 5.6e-05
        YolD   4 EhvealrelkeeqkkvekpeLDeqqleeinek 35 
                 Eh+e+l+  +++ +k e+  L++++l +++e+
  KHJ30792.1  97 EHKEQLKGREKKANKLEQSGLSTDELLAMQEA 128
                 9*************************999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       643  (0.0358637); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1079.51
//
Query:       KHJ30793.1  [L=293]
Description: putative eukaryotic translation initiation factor 3 subunit g [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-42  145.5   4.2      1e-42  145.5   4.2    1.6  2  eIF3g          Eukaryotic translation initiation factor 3 sub
      2e-17   62.7   0.1      4e-17   61.8   0.1    1.5  1  RRM_1          RNA recognition motif. (a.k.a. RRM, RBD, or RN
  ------ inclusion threshold ------
      0.011   15.6   0.0      0.033   14.0   0.0    1.8  2  RRM_occluded   Occluded RNA-recognition motif
       0.02   15.2   0.3      0.041   14.2   0.3    1.5  1  zf-CCCH_7      Chromatin remodeling factor Mit1 C-terminal Zn
      0.031   14.3   2.1       0.73    9.9   0.1    2.9  3  RRM_3          RNA binding motif
        3.4    8.1   5.6        1.4    9.4   0.3    2.4  2  ribosomal_L24  Ribosomal proteins 50S L24/mitochondrial 39S L


Domain annotation for each model (and alignments):
>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.5   4.2   3.4e-46     1e-42       2     125 .]      28     152 ..      27     152 .. 0.88
   2 ?   -2.0   0.0       1.5   4.5e+03      39      79 ..     221     261 ..     208     275 .. 0.57

  Alignments for each domain:
  == domain 1  score: 145.5 bits;  conditional E-value: 3.4e-46
       eIF3g   2 keiiededgiktvieykinedgkkvkvtrkiretkvkekvskavaeRkkwaKfGdekgdkpgpnsatttvgeevelkleeekeeekeeeekekaklkkk 100
                 +++++++dg +t+++y+i+edgkk+k tr+ir t++ke v+++vaeRk+w+KfG +++d+pgp+s+tt++ge+++++   + +++ ++e++e+  +k+k
  KHJ30793.1  28 TTTTTNKDGSQTIVSYRIDEDGKKIKYTRRIRFTTHKEIVNPRVAERKQWSKFGLSAKDQPGPDSSTTSIGENITFRPSANWKKDAKDEKTEAGIMKDK 126
                 57899*************************************************************************666555444555555555555 PP

       eIF3g 101 .ekklvkCriCkgdHfTskCPykdtl 125
                  ++k vkCriC+g+HfT++CP+kdt+
  KHJ30793.1 127 lKDKKVKCRICNGEHFTARCPFKDTM 152
                 55566*******************97 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.5
       eIF3g  39 ekvskavaeRkkwaKfGdekgdkpgpnsatttvgeevelkl 79 
                 +++ ++   R  +++fG+ ++    ++++t ++    ++++
  KHJ30793.1 221 SEMAEEQELRDMFERFGRVTRVFLAKDRETGMAKGFAFISF 261
                 44444555666777777766666666655555554444444 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.8   0.1   1.3e-20     4e-17       1      66 [.     215     281 ..     215     285 .. 0.96

  Alignments for each domain:
  == domain 1  score: 61.8 bits;  conditional E-value: 1.3e-20
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETT CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklgg 66 
                 l V+n+++ + e+eL+++F+ fG+++++ l +d etg +kgfaf+ F+ ++dA+kA e+++g+ +++
  KHJ30793.1 215 LRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDrETGMAKGFAFISFQERSDATKACEKMDGYGFKH 281
                 679***********************************************************98876 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.8   5.4e+03      59      76 ..      48      66 ..      45      68 .. 0.80
   2 ?   14.0   0.0   1.1e-05     0.033       2      70 ..     213     286 ..     212     290 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.8
  RRM_occluded 59 dgsefe.gkklrcGtvkdL 76
                  dg++++  +++r+ t k++
    KHJ30793.1 48 DGKKIKyTRRIRFTTHKEI 66
                  6888877899999998876 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 1.1e-05
  RRM_occluded   2 rtisllplsDtvnkariralveekegeikkivLvpdheG......AivefkdekiagkasLaLdgsefegkklrc 70 
                    t+ + ++s+   ++++r+++e   g++++++L  d e       A++ f+++++a ka  ++dg+ f+   lr+
    KHJ30793.1 213 ATLRVTNVSEMAEEQELRDMFERF-GRVTRVFLAKDRETgmakgfAFISFQERSDATKACEKMDGYGFKHLILRV 286
                   688999******************.**********98754556679**********************9888875 PP

>> zf-CCCH_7  Chromatin remodeling factor Mit1 C-terminal Zn finger 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.3   1.4e-05     0.041      66      86 ..     128     148 ..     122     151 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.4e-05
                 -SSS-B-TTT--B--TT--GG CS
   zf-CCCH_7  66 vddsvrCrcCgieHvPgrCpL 86 
                  d+ v+Cr+C+ eH  +rCp 
  KHJ30793.1 128 KDKKVKCRICNGEHFTARCPF 148
                 6899****************7 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.65   1.9e+03      36      55 ..      35      54 ..      31      85 .. 0.57
   2 ?    2.6   0.1     0.046   1.4e+02      51      78 ..     111     141 ..      98     144 .. 0.76
   3 ?    9.9   0.1   0.00025      0.73       9      57 ..     220     274 ..     213     287 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.65
                TSSEEEEEESSHHHHHHHHH CS
       RRM_3 36 gdkegevrFkedeeakkale 55
                + ++  v +  de++kk+  
  KHJ30793.1 35 DGSQTIVSYRIDEDGKKIKY 54
                55666677777777776533 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.046
                 HHHHHHHHHC...-B-CCTSSEEEEE--HHH CS
       RRM_3  51 kkalekatea...klkikdaevtlelLeGee 78 
                 k a ++ tea   k k+kd++v+ ++ +Ge+
  KHJ30793.1 111 KDAKDEKTEAgimKDKLKDKKVKCRICNGEH 141
                 4455566666666999*************97 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00025
                 -SSS--HHHHHHHCHCCS-ECEEEE-TTSSEEE......EEESSHHHHHHHHHHH CS
       RRM_3   9 lnkelsredikellsklgevayvdyekgdkege......vrFkedeeakkaleka 57 
                 +++    ++++++++++g v  v ++k+ ++g       + F+e ++a ka+ek+
  KHJ30793.1 220 VSEMAEEQELRDMFERFGRVTRVFLAKDRETGMakgfafISFQERSDATKACEKM 274
                 555666899**************999999998633333367************97 PP

>> ribosomal_L24  Ribosomal proteins 50S L24/mitochondrial 39S L24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.3   0.00047       1.4      36      60 ..      33      57 ..      30      66 .. 0.84
   2 ?    0.3   0.9      0.31   9.2e+02      39      59 ..     115     138 ..     110     142 .. 0.60

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00047
  ribosomal_L24 36 pkcgkptrvgfrlkedgkkvRvskk 60
                   +k+g +t v++r+ edgkk++++++
     KHJ30793.1 33 NKDGSQTIVSYRIDEDGKKIKYTRR 57
                   588999*****999******99886 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.31
  ribosomal_L24  39 gkptrvgfrlk..edgk.kvRvsk 59 
                    +++t  g+ +   +d+k k R++ 
     KHJ30793.1 115 DEKTEAGIMKDklKDKKvKCRICN 138
                    567888885423444444669994 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       619  (0.0345251); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 2410.55
//
Query:       KHJ30794.1  [L=675]
Description: putative hsp70-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   2.5e-264  878.0  15.4   2.9e-264  877.8  15.4    1.0  1  HSP70        Hsp70 protein
    7.2e-16   57.9   2.9      3e-13   49.3   0.7    2.5  2  MreB_Mbl     MreB/Mbl protein
    5.1e-06   26.4   0.2     0.0029   17.3   0.1    2.5  2  FGGY_C       FGGY family of carbohydrate kinases, C-terminal 
     0.0011   19.3   6.7       0.34   11.4   0.1    4.0  3  FtsA         Cell division protein FtsA
  ------ inclusion threshold ------
      0.034   13.6   0.0       0.54    9.7   0.0    2.4  1  BcrAD_BadFG  BadF/BadG/BcrA/BcrD ATPase family
      0.052   13.6   0.0        9.1    6.4   0.0    2.6  2  CMD          Carboxymuconolactone decarboxylase family
       0.14   11.9   0.0       0.96    9.2   0.0    2.2  2  Big_3_4      Domain of unknown function
       0.28   10.8   2.2        5.6    6.6   0.0    3.0  3  Raco_middle  RACo middle region


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  877.8  15.4  1.3e-267  2.9e-264       1     597 [.      46     646 ..      46     648 .. 0.98

  Alignments for each domain:
  == domain 1  score: 877.8 bits;  conditional E-value: 1.3e-267
                 EEEEEEXSSEEEEEEEETTEEEEEXXTTSXSSEESEEEEXTT.SEEETHHHHHCTTTTGGGEEEXGGGTTTXBTTSHHHHHHHTTXSSEEEEETTSBEE CS
       HSP70   1 viGiDLGttnsvvavmeggkievianeegnrttPsvvaFtkk.erlvGeaAkrqavtnpkntvfsvKrliGrkfsdpevqkeikelpykvvkkengkav 98 
                 viGiDLGttns+vavmeg+++++i+n+eg+rttPs+vaFt++ erlvG +Akrqav+np+nt+f++KrliGrkfsd evq++ ke+pyk+v+++ng+a+
  KHJ30794.1  46 VIGIDLGTTNSAVAVMEGQTARIIENSEGARTTPSIVAFTQEgERLVGVSAKRQAVVNPENTLFATKRLIGRKFSDIEVQRDLKEVPYKIVQHTNGDAW 144
                 79************************************************************************************************* PP

                 EEEEETTEEEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCCSSSCEEEEEEEEXSSX CS
       HSP70  99 veveaagekftpeqisamvLkklketaeaylgkkvtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldkkdkernvlvyDlGggt 197
                 v+++  gek++p+q+++++L+k+ketaeay  k+v++av+tvPaYfnd+qRqatkdAg+iAGL vlR+vNepTAaalaYGl+k++ +++++vyDlGggt
  KHJ30794.1 145 VSAR--GEKYSPSQVGGFILQKMKETAEAYFTKPVKNAVVTVPAYFNDSQRQATKDAGQIAGLSVLRVVNEPTAAALAYGLEKDE-DKVIAVYDLGGGT 240
                 **99..*****************************************************************************99.************* PP

                 EEEEEEEEETTEEEEEEEEEETTXSHHHHHHHHHHHHHHHHHHHHSXXGGGSHHHHHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTT.EEEEEEEEH CS
       HSP70 198 fdvSilelekGvfevkaTagDthlGGedfDealvehlveefkkkegidlskdkkalqrlkeaaekaKkeLSsskqteinleietvdedg.kdlseklsR 295
                 fd+S+le++kGvfevk+T+gDthlGGedfD  lv+hlv++fkk++gidls+d++a+qr++eaaekaK+eLSs+ qt+inl+++t+d++g k++++klsR
  KHJ30794.1 241 FDISVLEIQKGVFEVKSTNGDTHLGGEDFDILLVRHLVQQFKKDSGIDLSNDRMAIQRIREAAEKAKIELSSALQTDINLPFITADSSGpKHINMKLSR 339
                 *************************************************************************************************** PP

                 HHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTTCHHBSSSHTTTHHHHHHHHHHHHHCTCGCSHCCEEEEBESS-E CS
       HSP70 296 akfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfgkepsktvnpDeavaiGAAvqagvlsgeeevkdllllDvtpLsl 394
                 +++e+lve+l++rt+epv+kalkda+l++++i+ev+lvGG+tR+Pkv e+vk++fg+ep k+vnpDeava+GAA+q+gvl+g  +v+d+lllDvtpLsl
  KHJ30794.1 340 SQLEKLVEPLIARTVEPVRKALKDAGLTANDIQEVILVGGMTRMPKVVESVKSIFGREPAKSVNPDEAVAMGAAIQGGVLAG--NVTDVLLLDVTPLSL 436
                 **********************************************************************************..*************** PP

                 EEEETTTEEEEEESTTCBSSEEEEEEEEESSTTSSSEEEEEEESSSSBGGGSEEEEEEEEECESSCSTTCSEEEEEEEEETTSCEEEEEEETTTCCEEE CS
       HSP70 395 gietlggvmtkliernttiptkksqvfstaadnqtaveievlqgerelvkdnkllgsfeldgippaprGvpqieVtfdidanGiltvsakdketgkeee 493
                 gietlggv+ +li+rnttiptkksqvfstaad qtavei+v+qgerelv+dnkllg+f+l+gippa rGvpq+eVtfdida+ i++v+akdk+t+++++
  KHJ30794.1 437 GIETLGGVFSRLINRNTTIPTKKSQVFSTAADFQTAVEIKVYQGERELVRDNKLLGNFQLTGIPPAHRGVPQVEVTFDIDADAIVHVHAKDKSTNRDQS 535
                 *************************************************************************************************** PP

                 EEEECCSSSBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHHHHHHHHHCHTTSSC.......HHHHHHHHHH CS
       HSP70 494 itieaseglseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslekkleeeaekvseaekekvesaieeLkeeleeee.......keeieaktee 585
                 iti++ +gls++ei++m++d+e++ae+dk++k++iea n+++++++++e++l+e+++k+++ e+++++++i++L+e +++++       ++++++kt+e
  KHJ30794.1 536 ITIASGSGLSDDEIQSMINDSERYAEQDKERKATIEAANRSDTVLNDTERSLNEHSDKLDKVEADQIREKITALRELVTKSQageetisSAQLKEKTDE 634
                 ***************************************************************************999877777778878889999999 PP

                 HHHHHHHHHHHH CS
       HSP70 586 lkkvvekiaekl 597
                 l+ ++ ++++k+
  KHJ30794.1 635 LQMASLNMFDKI 646
                 999988887765 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.1   0.00052       1.2       4      45 ..      47      97 ..      44     138 .. 0.64
   2 !   49.3   0.7   1.3e-16     3e-13      84     316 ..     168     413 ..     156     418 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00052
                EEEEE-SSEEEE.EETTTE..EEEEE......ES-EEEETTT--EEEESHH CS
    MreB_Mbl  4 lgiDLGtantlv.yvkgkg..ivlne......psvvAikkktkkvlavGee 45
                +giDLGt+n  v  ++g+   i+ n       ps+vA++++ ++++ v  +
  KHJ30794.1 47 IGIDLGTTNSAVaVMEGQTarIIENSegarttPSIVAFTQEGERLVGVSAK 97
                8********999344555421443312333337888887776666554433 PP

  == domain 2  score: 49.3 bits;  conditional E-value: 1.3e-16
                 HHHTSS-SS--EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT--TTSSS-EEEEEE-SS-EEEEEEETT.EEEEEEE....ES-SH CS
    MreB_Mbl  84 kvkkkkslskprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglpveepsgnmvvdiGggttevavislg.givtsks....vrvaG 177
                  ++   + + ++ v++vP   ++ +r+A k+a + aG +   +++ep aAA+  gl+ +e +   v d+Gggt +++v+ ++ g+ + ks     +++G
  KHJ30794.1 168 TAEAYFTKPVKNAVVTVPAYFNDSQRQATKDAGQIAGLSVLRVVNEPTAAALAYGLEKDEDKVIAVYDLGGGTFDISVLEIQkGVFEVKStngdTHLGG 266
                 3333334456789******************************************************************986266666662233579** PP

                 HHHHHHHHHHHHHHHS...........EE--..HHHHHHHHHHH-BSS--HHHHEEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHT CS
    MreB_Mbl 178 deldeaiikyirkkyn...........lliG..ertaekikieigsavkeeeeekmeikGrdlvtglpkevevsseevrealkepvsaiveavkevLek 263
                 +++d  +++++ ++++           ++i   ++ aek kie++sa +++ +  +     d       ++++s +++++ ++  +++ ve v+++L++
  KHJ30794.1 267 EDFDILLVRHLVQQFKkdsgidlsndrMAIQriREAAEKAKIELSSALQTDINLPF--ITADSSGPKHINMKLSRSQLEKLVEPLIARTVEPVRKALKD 363
                 ****9999999888872222221111122322124567777777777666655432..333444444456788999*********************98 PP

                 S-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHHSS-EEE-SSTTTHHHHHHH CS
    MreB_Mbl 264 tppeLaadivdrgivltGGgallkgldkllseetglpvkvaedpltcvakGtg 316
                 +   L+a+ +++ ++l+GG + +  + + +++ +g +   + +p ++va G++
  KHJ30794.1 364 A--GLTANDIQE-VILVGGMTRMPKVVESVKSIFGREPAKSVNPDEAVAMGAA 413
                 6..465544444.7788*********************************986 PP

>> FGGY_C  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.0    0.0028       6.3      81     134 ..      16      67 ..       3      81 .. 0.83
   2 !   17.3   0.1   1.3e-06    0.0029     146     196 ..     367     418 ..     339     420 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0028
      FGGY_C  81 eavadaggvvfvpafsglrapywdpdargtitglsssttlahiarAaleavalq 134
                 + +  ++++ + p f  ++a  +d+++rg ++g++ +t  ++ a A++e++  +
  KHJ30794.1  16 SRSLRNARFSVTPSFVRQYAEEADKKVRGPVIGIDLGT--TNSAVAVMEGQTAR 67 
                 566677899999**************************..88999999998765 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 1.3e-06
      FGGY_C 146 sgkpldrlavdGGgskndllmqllAdilg.vpVerpktaeatalGaAilAav 196
                 +  ++++++++GG+++ + +++   +i+g  p + + ++ea+a+GaAi ++v
  KHJ30794.1 367 TANDIQEVILVGGMTRMPKVVESVKSIFGrEPAKSVNPDEAVAMGAAIQGGV 418
                 45679************************99******************997 PP

>> FtsA  Cell division protein FtsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.2    0.0076        17       1      86 [.      47     173 ..      47     191 .. 0.53
   2 !   11.4   0.1   0.00015      0.34       2     101 ..     233     409 ..     232     413 .. 0.72
   3 ?    3.0   0.2      0.06   1.3e+02      24      71 ..     534     602 ..     514     667 .. 0.58

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0076
                 EEEEE-SSSEEEEEEETTEEEEEEEES-.-HHHHHHH....HHHHHT--HHHHHHHHHHH--S--................EEEEEHHHHH........ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxx................xxxxxxxxxx........ RF
        FtsA   1 alvDiGagktdvavaedgalvhlrvigv.ggngitkd....iakalrtaveeAerikikyGsala................ekeigrkels........ 70 
                 +++D+G++ + vav+e++     r+i   +g   t +    ++++ r    +A+r +    ++++                +                 
  KHJ30794.1  47 IGIDLGTTNSAVAVMEGQ---TARIIENsEGARTTPSivafTQEGERLVGVSAKRQA----VVNPentlfatkrligrkfsD--------Ievqrdlke 130
                 58***************4...455554444444444444444444444444444444....333344444443333222221........022233334 PP

                 ...........................GGGGSTTHHHHHHHHH CS
                 ...........................xxxxxxxxxxxxxxxx RF
        FtsA  71 ...........................ggsalpnleelaeral 86 
                                            gg  l++++e ae  +
  KHJ30794.1 131 vpykivqhtngdawvsargekyspsqvGGFILQKMKETAEAYF 173
                 5555555666666666666666666666666666666666665 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00015
                 EEEE-SSSEEEEEEETTEEEE...............EEEES-..-HHHHHHH.......HHHHHT--HHHHHHHHHHH--S--................ CS
                 xxxxxxxxxxxxxxxxxxxxx...............xxxxxx..xxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxx................ RF
        FtsA   2 lvDiGagktdvavaedgalvh...............lrvigv..ggngitkd.......iakalrtaveeAerikikyGsala................ 60 
                 + D+G+g+ d++v+e ++ v+               ++++ v    ++++kd          a++   e+Ae+ ki+  sal+                
  KHJ30794.1 233 VYDLGGGTFDISVLEIQKGVFevkstngdthlggedFDILLVrhLVQQFKKDsgidlsnDRMAIQRIREAAEKAKIELSSALQtdinlpfitadssgpk 331
                 5689999999999998764445556666666666774444444433444444555544434478899999*****999999999999999999999966 PP

                 ..EEEEEHHHHH...................................GGGGSTTHHHHHHHHH..T-..HHHT-GGGHHH CS
                 ..xxxxxxxxxx...................................xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxx RF
        FtsA  61 ..ekeigrkels...................................ggsalpnleelaeral..spkleevsdpeyasa 101
                   + +++r++l+                                   g + +p+++e +++++  +p   +  +p  a+a
  KHJ30794.1 332 hiNMKLSRSQLEklvepliartvepvrkalkdagltandiqevilvgGMTRMPKVVESVKSIFgrEP--AKSVNPDEAVA 409
                 55444444444488899999999999999999999999999*********************96644..22344444444 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.06
                 EEES-.-HHHHHHH.HHHHHT--HHHHHHHHHHH--S--..................EEEEEHHHHH.........G CS
                 xxxxx.xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxx..................xxxxxxxxxx.........x RF
        FtsA  24 rvigv.ggngitkd.iakalrtaveeAerikikyGsala..................ekeigrkels.........g 71 
                 ++i +  g+g+++d i+ +++ +   Ae+ k + ++  a                  +        +          
  KHJ30794.1 534 QSITIaSGSGLSDDeIQSMINDSERYAEQDKERKATIEAanrsdtvlndterslnehS--------DkldkveadqI 602
                 4555557788888889999999999999999665555555555555555544444330........03333333332 PP

>> BcrAD_BadFG  BadF/BadG/BcrA/BcrD ATPase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00024      0.54       1      69 [.      47     378 ..      47     420 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00024
                  EEEEE-SSEEEEEEEETTTEEEEEEEE--..................................................................... CS
  BcrAD_BadFG   1 vGiDgGsTttkavlmdekgevlgrgitns..................................................................... 29 
                  +GiD+G+T   +++m+ +     r i ns                                                                     
   KHJ30794.1  47 IGIDLGTTNSAVAVMEGQTA---RIIENSegarttpsivaftqegerlvgvsakrqavvnpentlfatkrligrkfsdievqrdlkevpykivqhtng 141
                  79******999999998855...777777777888889999999999999999999999999999999999998888888888888888888888888 PP

                  .................................................................................................. CS
  BcrAD_BadFG  30 .................................................................................................. 29 
                                                                                                                    
   KHJ30794.1 142 dawvsargekyspsqvggfilqkmketaeayftkpvknavvtvpayfndsqrqatkdagqiaglsvlrvvneptaaalayglekdedkviavydlggg 239
                  88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 PP

                  .................................................................................................. CS
  BcrAD_BadFG  30 .................................................................................................. 29 
                                                                                                                    
   KHJ30794.1 240 tfdisvleiqkgvfevkstngdthlggedfdillvrhlvqqfkkdsgidlsndrmaiqrireaaekakielssalqtdinlpfitadssgpkhinmkl 337
                  88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888777 PP

                  ..TTS-HHH.........HHHHHHHHHHT--GGGECEE..EE CS
  BcrAD_BadFG  30 ..anlesvrfeaaekvleealtealerageeeadieetylvg 69 
                    ++le+  +e      +e +++al+ ag++++di+e++lvg
   KHJ30794.1 338 srSQLEKL-VEPLIARTVEPVRKALKDAGLTANDIQEVILVG 378
                  76666644.344455556677888888888888888887766 PP

>> CMD  Carboxymuconolactone decarboxylase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0    0.0041       9.1      48      70 ..     359     381 ..     356     391 .. 0.82
   2 ?    4.3   0.0     0.019        42      48      80 ..     537     569 ..     528     575 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0041
                 HHHHHTT--HHHHHHHHHHHHHH CS
         CMD  48 raAleaGvteeeiaevlaqaaay 70 
                 +a+++aG+t+++i+ev+ ++  +
  KHJ30794.1 359 KALKDAGLTANDIQEVILVGGMT 381
                 4667*************987665 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.019
                 HHHHHTT--HHHHHHHHHHHHHHHSHHHHHHHH CS
         CMD  48 raAleaGvteeeiaevlaqaaayagwpaaraAl 80 
                  +A   G++++ei+  +   + ya ++++r+A 
  KHJ30794.1 537 TIASGSGLSDDEIQSMINDSERYAEQDKERKAT 569
                 578899************************653 PP

>> Big_3_4  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.55   1.2e+03      28      58 ..      82     116 ..      67     164 .. 0.61
   2 ?    9.2   0.0   0.00043      0.96      25      87 ..     508     573 ..     503     586 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.55
     Big_3_4  28 vPldedGeyvvellaedea....Gnqayiakllyv 58 
                 v + ++Ge +v + a+ +a     n  + +k l  
  KHJ30794.1  82 VAFTQEGERLVGVSAKRQAvvnpENTLFATKRLIG 116
                 77888888888888877662222344455555544 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00043
     Big_3_4  25 nvpvPldedGeyvvellaedeaGnqayiakll..yvvdienicvevrpld.ylsekleteftieav 87 
                 +v v +d+d + +v + a+d++ n+    ++     +  + i+  ++  + y+ +  e++ tiea 
  KHJ30794.1 508 QVEVTFDIDADAIVHVHAKDKSTNRDQSITIAsgSGLSDDEIQSMINDSErYAEQDKERKATIEAA 573
                 699*******************99765555541145677888888888777999999999999876 PP

>> Raco_middle  RACo middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1     0.046     1e+02       3      28 ..      47      72 ..      46      76 .. 0.87
   2 ?    6.6   0.0    0.0025       5.6      49      94 ..     337     381 ..     331     414 .. 0.79
   3 ?   -3.2   0.1       2.6   5.8e+03      33      45 ..     614     626 ..     588     652 .. 0.51

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.046
  Raco_middle  3 lavDiGtTtvvaaLvdletgkelaea 28
                 + +D+GtT+ ++a+++ +t ++++++
   KHJ30794.1 47 IGIDLGTTNSAVAVMEGQTARIIENS 72
                 579************99999988765 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0025
  Raco_middle  49 keeeegleklqkavveeinelieelleeagiekeeiyevvvagNtt 94 
                   + +++lekl + +++   e ++++l++ag+++++i+ev+++g  t
   KHJ30794.1 337 LS-RSQLEKLVEPLIARTVEPVRKALKDAGLTANDIQEVILVGGMT 381
                  44.789999*9*99************************99887644 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 2.6
  Raco_middle  33 pQikyGeDvlsRi 45 
                   + + Ge+ +s  
   KHJ30794.1 614 TKSQAGEETISSA 626
                  2333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (675 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1735  (0.0967706); expected 358.6 (0.02)
Passed bias filter:                      656  (0.0365888); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.72u 0.29s 00:00:01.01 Elapsed: 00:00:00.41
# Mc/sec: 4977.45
//
Query:       KHJ30795.1  [L=687]
Description: putative wd domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-06   28.4   0.0    2.6e-06   27.2   0.0    1.6  1  DUF2415      Uncharacterised protein domain (DUF2415)
     0.0014   18.9   0.0          2    8.7   0.0    3.8  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> DUF2415  Uncharacterised protein domain (DUF2415)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.0   2.9e-10   2.6e-06       3      42 ..     325     362 ..     323     363 .. 0.93

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 2.9e-10
     DUF2415   3 fRvckFSpesglnDLLvisEhvgrvHlvDlRtgldehqVi 42 
                 +R + F p +   DLL ++E + r+ ++D+R+ + ++q++
  KHJ30795.1 325 VRDMEFCPGPF--DLLAWTESKDRIVIADVRNFFLSRQIL 362
                 8******8887..******************999****97 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.06   5.4e+02      54      78 ..     179     203 ..     173     213 .. 0.84
   2 ?    2.8   0.0     0.017   1.5e+02      45      68 ..     279     302 ..     271     316 .. 0.89
   3 !    8.7   0.0   0.00023         2      16      62 ..     620     669 ..     615     680 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.06
  ANAPC4_WD40  54 avaysdgevrlldaesgkvvhslsv 78 
                   v+ +d ++ +l+ es++++++l+ 
   KHJ30795.1 179 LVSNNDRSITILKLESAEILEKLTL 203
                  5788899*************99976 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.017
  ANAPC4_WD40  45 aWkpdgklLavaysdgevrlldae 68 
                  a++p+ k Lava++ g +++++ +
   KHJ30795.1 279 AFSPSAKYLAVATQHGLISIFEKN 302
                  6889999*********99999865 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.00023
  ANAPC4_WD40  16 dgellvfRlngqrvwtleedkedsevr...sLaWkpdgklLavaysdgev 62 
                   +el+ f l+ qrv t+++ ++++ +    + +W++dgk++  a++ g  
   KHJ30795.1 620 MDELIDFALDAQRVITGQRISPQNGIVttmGCCWSQDGKIIYAATESGIH 669
                  56777788999******554444433323488************999965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (687 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.21s 00:00:00.76 Elapsed: 00:00:00.37
# Mc/sec: 5582.77
//
Query:       KHJ30796.1  [L=872]
Description: putative origin recognition complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.1e-62  208.4   0.1    1.9e-61  207.2   0.0    1.7  2  ORC4_C           Origin recognition complex (ORC) subunit 4 C
    9.1e-12   44.7   6.8    1.7e-11   43.8   6.8    1.5  1  PHD              PHD-finger
      5e-11   43.3   0.0      1e-10   42.2   0.0    1.6  1  AAA_16           AAA ATPase domain
    4.3e-07   30.3   0.1    1.2e-06   28.8   0.0    1.8  1  AAA_22           AAA domain
    1.9e-06   27.3   1.6    3.7e-06   26.4   1.6    1.5  1  PHD_2            PHD-finger
    8.7e-06   26.2   0.0    6.6e-05   23.3   0.0    2.5  1  AAA              ATPase family associated with various cellul
    8.1e-05   22.6   0.0    0.00069   19.6   0.0    2.2  1  NACHT            NACHT domain
    8.4e-05   22.3   2.3    0.00028   20.5   2.3    2.0  1  zf-PHD-like      PHD/FYVE-zinc-finger like domain
    9.7e-05   21.6   0.0    0.00017   20.9   0.0    1.3  1  DUF815           Protein of unknown function (DUF815)
     0.0035   17.0   0.0     0.0084   15.8   0.0    1.5  1  AAA_29           P-loop containing region of AAA domain
     0.0077   16.2   0.2       0.06   13.3   0.0    2.6  2  ATPase_2         ATPase domain predominantly from Archaea
  ------ inclusion threshold ------
      0.018   14.6   0.0      0.045   13.3   0.0    1.6  1  AAA_7            P-loop containing dynein motor region
      0.022   14.6   0.9      0.022   14.6   0.9    2.0  2  C1_1             Phorbol esters/diacylglycerol binding domain
      0.031   13.5   0.1      0.054   12.7   0.1    1.3  1  NB-ARC           NB-ARC domain
      0.046   14.0   0.0       0.12   12.8   0.0    1.7  1  AAA_19           AAA domain
      0.065   12.4   0.0       0.11   11.6   0.0    1.4  1  PIF1             PIF1-like helicase
      0.066   12.9   0.0       0.15   11.7   0.0    1.6  1  Sigma54_activat  Sigma-54 interaction domain
      0.067   13.4   3.1       0.19   12.0   3.1    1.7  1  PHF5             PHF5-like protein
        0.1   12.6   0.0       0.61   10.1   0.0    2.4  2  AAA_14           AAA domain
       0.14   12.4   0.1       0.89    9.8   0.0    2.4  2  Roc              Ras of Complex, Roc, domain of DAPkinase
       0.25   11.7   5.2       0.24   11.7   2.3    2.3  2  C1_2             C1 domain
       0.63   10.2   2.9        1.6    8.9   2.9    1.7  1  Zf_RING          KIAA1045 RING finger
        2.4    8.4   5.6       0.84    9.9   2.4    1.9  1  zf-HC5HC2H       PHD-like zinc-binding domain
        4.7    7.2   6.0        3.4    7.7   4.2    1.7  1  Prok-RING_1      Prokaryotic RING finger family 1
        6.8    7.1   7.0        8.1    6.9   5.4    2.0  2  zf-RING_2        Ring finger domain


Domain annotation for each model (and alignments):
>> ORC4_C  Origin recognition complex (ORC) subunit 4 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       8.6   6.2e+03      37      76 ..     125     164 ..     123     191 .. 0.70
   2 !  207.2   0.0   2.6e-64   1.9e-61       1     218 [.     636     857 ..     636     858 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 8.6
      ORC4_C  37 lledsafqellkrlyyltksvrallnslilpvsalspssp 76 
                 +++ ++  +++ r+ ++++s r+ +n+ + +v + +++s 
  KHJ30796.1 125 FVKPPKNSKTISRNLNSSNSSRKGRNASFDAVNRRKKESD 164
                 6667777788888888888888888888888888666433 PP

  == domain 2  score: 207.2 bits;  conditional E-value: 2.6e-64
      ORC4_C   1 eickelLslpeeesseeasdsa....dakfleaWnksieell.edsafqellkrlyyltksvrallnslilpvsalspsspkitaesllsales.aapd 93 
                 e ck +Ls++e e ++++++       ++f + Wn++ie+l+ +d+ f +++k+++y  ksv+ +l+s+i+p+s+ls+++p +  + ++s+    ++pd
  KHJ30796.1 636 EACKGGLSISEFEAEKKSKEFMltagYQEFMSYWNAMIENLYtKDKFFIDHIKSIFYRAKSVPIFLSSCIIPISNLSTKRPLLCGAAFQSNGILlSEPD 734
                 67*******9999876665544999********************************************************999999998877769*** PP

      ORC4_C  94 sklslLrsLSeLeLaLLIaaarldeiydtdtvNFemaydeYkklakrakvqsssassqssasgalatgarvWgrdvalkawerLisleLllpagagsss 192
                 skl+++++LS+LeLaLLIaaarld i dtd++NF+may+eY++l++r+k+q       +s+sga a+ga+vWgr+v l awe+L+++eLl+p  a+ss+
  KHJ30796.1 735 SKLHIVQGLSDLELALLIAAARLDVILDTDMCNFAMAYEEYSSLTSRHKIQ-------TSNSGAKAIGAKVWGRQVSLDAWEKLAQYELLVPIMASSSG 826
                 ***************************************************.......7889999***************************9776666 PP

      ORC4_C 193 es.....sssgggkefrmvrlevsleeikaa 218
                 +      ++   ++ +rm++++++leei+  
  KHJ30796.1 827 SIfstagHGRDYSAVGRMWKVDIALEEIPGS 857
                 669998555559999*************865 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.8   6.8   2.4e-14   1.7e-11       2      51 ..     341     388 ..     340     389 .. 0.91

  Alignments for each domain:
  == domain 1  score: 43.8 bits;  conditional E-value: 2.4e-14
                 BTTTTS.TTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   2 CavCkk.ksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCke 51 
                 C+vC++ +s++++ +++CdgC++ +H+kC+++ +e++++    w+CekCk+
  KHJ30796.1 341 CEVCRRyDSKKKNPMLLCDGCDSGYHVKCIGLAKEPSSD---LWFCEKCKP 388
                 *******999***********************994444...6******97 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.0   1.4e-13     1e-10       4     169 ..     438     597 ..     435     598 .. 0.77

  Alignments for each domain:
  == domain 1  score: 42.2 bits;  conditional E-value: 1.4e-13
      AAA_16   4 GReeeleqLlsale.rvrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekl 101
                   e e+++++++++ +v +g+++++l++G +G+GKs lv+++   ++ +     r++++                  +l   ++++++ a+ e wr+ l
  KHJ30796.1 438 NLEVEMQKVHQIVHqTVLAGEGNSMLIIGSRGTGKSCLVDHVISDISNE----HRENFHVV----------------RLNGFIHTDDRIALKEIWRQ-L 515
                 5688999**999999****************************999998....56666666................67777777777777777777.5 PP

      AAA_16 102 eealaavpelagaea.srllellkrllallsrder...........plvlvlDdlqwadeaslql.laaLlrlles.k.pllv 169
                  ++++ v ++++  +  + ++ l  llalls +++            ++++lD+++ +  + +q  l++L++ ++s k p+lv
  KHJ30796.1 516 GREMR-VEDDDPMMKsGHHADILMTLLALLSDPSHmsetepnqtatSVIFILDEFDHFTIHHRQTlLYNLFDIAQSkKaPILV 597
                 55566.33333333335555555566666666666777788888766*************999999*********98668887 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.0   1.7e-09   1.2e-06       5     131 ..     459     601 ..     455     607 .. 0.75

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 1.7e-09
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevv....fvtlpsst.sskdllrellralglelka....erlsseellealeqalrarav... 91 
                  ++++++G  GtGK+ l+  + +   +e  ++ e+ +vv    f+        +k+++r+l r++ +e ++    +++  + l+++l+  ++  ++   
  KHJ30796.1 459 GNSMLIIGSRGTGKSCLVDHVISDISNE--HR-ENFHVVrlngFIHTDD-RiALKEIWRQLGREMRVEDDDpmmkSGHHADILMTLLALLSDPSHMset 553
                 6789*******************98543..22.4555553344444444.359*************99999***8555555555555444444444566 PP

      AAA_22  92 .......ielliiDEaqhlr...seealeeLrsllnlsrkgvqliLvGtp 131
                         +++i+DE++h++   ++++l +L +++   +k+ ++++ G +
  KHJ30796.1 554 epnqtatSVIFILDEFDHFTihhRQTLLYNLFDIAQ--SKKAPILVLGLT 601
                 9999998999*********77655999999988888..999999999865 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   1.6   5.2e-09   3.7e-06       2      36 .]     353     387 ..     352     387 .. 0.97

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 5.2e-09
       PHD_2   2 npllsCdkCsvaVHasCYGvskesdgeeWlCrrCe 36 
                 np+l Cd+C    H +C G+ ke++++ W C++C+
  KHJ30796.1 353 NPMLLCDGCDSGYHVKCIGLAKEPSSDLWFCEKCK 387
                 9*************************99******5 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   9.3e-08   6.6e-05       1     127 [.     462     621 ..     462     624 .. 0.76

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 9.3e-08
                 EEEESSTTSSHHHHHHHHHHHH......THEEEEEETTTCSSS.....................................STTHHHHHHHHHHHHHHHT CS
         AAA   1 vllyGppGtGKTllakavakel......gvefleisgsellsk.....................................yvgesekkirelfkeakek 56 
                 +l++G  GtGK+ l+  v++++      ++++++++g   +++                                      +   ++++          
  KHJ30796.1 462 MLIIGSRGTGKSCLVDHVISDIsnehreNFHVVRLNGFIHTDDrialkeiwrqlgremrvedddpmmksghhadilmtllALLSDPSHM---------- 550
                 799******************9555544488888888888866899999***************9997776555554433233333333.......... PP

                 S........TSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESS...GGGSTHHHHSTTSSEE CS
         AAA  57 a........kpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnr...pdkldpallrgRfdrk 127
                 +        + +i+++DE+d ++ +            +  L++ +d  ++k+++++v+g t++    ++l++ +  +Rf+++
  KHJ30796.1 551 SetepnqtaTSVIFILDEFDHFTIHH----------RQTLLYNLFDIAQSKKAPILVLGLTTKvdaAEMLEKRVK-SRFSHR 621
                 1334445534488889*****98776..........58999999**999999***********666667777777.888765 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   9.6e-07   0.00069       3     142 ..     462     613 ..     460     627 .. 0.65

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 9.6e-07
                 EEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEE.EEEETTTTTTS-......-HCHHHCCCCTS--SSS-C..........CHHHHCCSCCCEE... CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegklpqgafklv.Fflslrelsrsgna...rsladllfsqlpepaapvse..........vwavllelperlL... 84 
                 +++ G  G GK+ L+ ++++++  ++ ++  f +v +  + +++ r+      r l + ++ + ++p +++ +                      L   
  KHJ30796.1 462 MLIIGSRGTGKSCLVDHVISDISNEHREN--FHVVrLNGFIHTDDRIALKeiwRQLGREMRVEDDDPMMKSGHhadilmtllaL-----------Lsdp 547
                 799***********************888..55552555666666665443343333333333333333333344444333330...........1444 PP

                 ................EEEE-STT-SS-TCH.........HHHHHCTTTTT--EEEEEEECCCHHHHCTTSSCE CS
       NACHT  85 ................lilDglDelvtdlgqkekqpvrtlLselirkkllpeasllltvrpralrdleeqleea 142
                                 +ilD +D +  + +q       tlL +l+  +  ++a++l+   ++++ d++e+le+ 
  KHJ30796.1 548 shmsetepnqtatsviFILDEFDHFTIHHRQ-------TLLYNLFDIAQSKKAPILVLGLTTKV-DAAEMLEKR 613
                 4455555555556666**********98888.......99999999999999999987777766.666666665 PP

>> zf-PHD-like  PHD/FYVE-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   2.3   3.9e-07   0.00028       1      33 [.     341     373 ..     341     390 .. 0.95

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 3.9e-07
  zf-PHD-like   1 CdtCaeskdeekgqlvyCqGCslsyhkaClGkR 33 
                  C++C   ++++k +++ C GC + yh +C+G  
   KHJ30796.1 341 CEVCRRYDSKKKNPMLLCDGCDSGYHVKCIGLA 373
                  9******************************75 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   2.3e-07   0.00017      29      82 ..     435     491 ..     420     519 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 2.3e-07
      DUF815  29 dLvgidkqkealventeqfleglpannvLLwGarGtGKSslvkallneyaeeg...L 82 
                 +L++++ + +++ + ++q +   + n +L++G+rGtGKS lv  +++++++e+    
  KHJ30796.1 435 KLINLEVEMQKVHQIVHQTVLAGEGNSMLIIGSRGTGKSCLVDHVISDISNEHrenF 491
                 68999999************999**********************999988765554 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.2e-05    0.0084      19      43 ..     455     480 ..     442     491 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.2e-05
      AAA_29  19 idlkg.atlltGpsGsGKSTllDAiq 43 
                 +  +g ++l++G  G+GKS l+D ++
  KHJ30796.1 455 LAGEGnSMLIIGSRGTGKSCLVDHVI 480
                 4445669****************765 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       3.5   2.5e+03     150     176 ..     231     263 ..     225     288 .. 0.71
   2 !   13.3   0.0   8.3e-05      0.06      17     165 ..     456     601 ..     436     627 .. 0.65

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 3.5
    ATPase_2 150 esltkekhlcvviclsSeglfie......rvyn 176
                  + t++k +  v++ sS++ +i       r++n
  KHJ30796.1 231 TESTAKKSALAVFIPSSQSKSIHsdpkkrRIEN 263
                 566888899999999999999884444444444 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 8.3e-05
    ATPase_2  17 repneiyfiYGpegsGKtaLlkeiienledkdkyviyyialreesiskldefie..........eeeekkklekalgiavpkaeleeilkeksklvfka 105
                  ++ + ++i G++g GK+ L+ ++i+  ++ + + + +  l++ +i++ d+  +          e ++++  ++++   +++     il +  +l+   
  KHJ30796.1 456 AGEGNSMLIIGSRGTGKSCLVDHVISDISNEHRENFHVVRLNG-FIHTDDRI-AlkeiwrqlgrEMRVED--DDPM---MKSGHHADILMTLLALLSDP 547
                 3567788999*****************9998888888877765.34433333.32233333223222222..2222...22222233455677787888 PP

    ATPase_2 106 ielllekikkkgkkiiiiiDelqklidlglngaellvkeLlnliesltkekhlcvvicls 165
                       + +++++ +i i+De+       + + + l+++L+++ +s   +k  ++v+ l+
  KHJ30796.1 548 SHMSETEPNQTATSVIFILDEFDHFT---IHHRQTLLYNLFDIAQS---KKAPILVLGLT 601
                 88888888999999*******99999...66779999999999888...55666665555 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   6.2e-05     0.045      28      61 ..     454     487 ..     440     505 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 6.2e-05
       AAA_7  28 lllknkkpvllvGptGtGKtviikdllkkldkek 61 
                  l  +++++l++G+ GtGK++++ ++++ +++e+
  KHJ30796.1 454 VLAGEGNSMLIIGSRGTGKSCLVDHVISDISNEH 487
                 46678899*****************999988654 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.9   3.1e-05     0.022       8      47 ..     335     374 ..     331     380 .. 0.89
   2 ?   -1.3   0.1       2.9   2.1e+03      26      35 ..     378     387 ..     371     390 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 3.1e-05
                 -SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS- CS
        C1_1   8 fkqptfCkhCgeflwgkekqglkCswCkllvHkkChekvp 47 
                 +++ t C+ C+   ++k  ++l C+ C   +H kC+ +++
  KHJ30796.1 335 LEDDTACEVCRRYDSKKKNPMLLCDGCDSGYHVKCIGLAK 374
                 567899********99*******************98876 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 2.9
                 S-EEEETTT- CS
        C1_1  26 kqglkCswCk 35 
                 +  + C+ Ck
  KHJ30796.1 378 SDLWFCEKCK 387
                 5567888886 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   7.5e-05     0.054      16      97 ..     457     538 ..     442     546 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 7.5e-05
                 TTSCSEEEEEEESTTSSHHHHHHHHCCSHCCCCC.CBTEEE...EEEEESXXHHHHHHHXXHHHHHCCCTTSSSS-STTSHHHHHH CS
      NB-ARC  16 delqslvvalvGmgGvGKttlakqilnksdeveg.rFdsva...wvvvsktdkseeiletilkeLslseddleekeeveslkrklv 97 
                 +e +   + + G  G GK+ l+ +++++ ++ ++ +F +v    ++   +    +ei++++ +e+  + dd+  +++++  ++ l+
  KHJ30796.1 457 GEGN--SMLIIGSRGTGKSCLVDHVISDISNEHReNFHVVRlngFIHTDDRIALKEIWRQLGREMRVE-DDDPMMKSGH-HADILM 538
                 4444..6999******************7766666999765222456666677788888888888555.5555555555.344444 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   0.00016      0.12       9     126 ..     458     585 ..     451     602 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00016
      AAA_19   9 kekvllvtaGpGtGKTrvlkhivallvelggvkp....eeillvaftgrAakelrerlaalgae..................atTiHrlalldfddllt 85 
                 + + +l+++  GtGK+ ++ h+++ + ++++++      +  + +  + A ke+  +l   g+e                           +++  ll+
  KHJ30796.1 458 EGNSMLIIGSRGTGKSCLVDHVISDISNEHRENFhvvrLNGFIHTDDRIALKEIWRQL---GREmrvedddpmmksghhadiL--------MTLLALLS 545
                 56789**********************9998876333323334455556666666655...5555566878885333332222........44444444 PP

      AAA_19  86 ealelleeaeeekklqeeellivDEfqdvd.elqyrLlkall 126
                 ++ ++  +++e ++     ++i DEf   +    ++Ll +l+
  KHJ30796.1 546 DPSHM--SETEPNQTATSVIFILDEFDHFTiHHRQTLLYNLF 585
                 44444..33334444244488889999988877788877766 PP

>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00016      0.11       2      51 ..     439     488 ..     438     498 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00016
                 --HHHHHHHHHH......HCTS-EEEEESTTSSCHHHHHHHHHHCHCTCC CS
        PIF1   2 LneeQkkvfdaiieavlnekgklfFvtGsgGtgKtflwkallkklrsegk 51 
                 L  e +kv + + ++vl+ +g+++ + Gs GtgK+ l  ++++ + +e++
  KHJ30796.1 439 LEVEMQKVHQIVHQTVLAGEGNSMLIIGSRGTGKSCLVDHVISDISNEHR 488
                 566788999999999**************************999988654 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00021      0.15       7      56 ..     442     494 ..     436     503 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00021
                      HHHHHHHHHHHHCTSS..S-EEEECSTTSSHHHHHHHHHH.HSTTTTS-EEEE CS
  Sigma54_activat   7 alkelleqikkvaktd..lsvlitGesGtGKellaraihe.askrkekpfvav 56 
                      +++++ + +++++      s+li G  GtGK++l +++ +  s++++++f  v
       KHJ30796.1 442 EMQKVHQIVHQTVLAGegNSMLIIGSRGTGKSCLVDHVISdISNEHRENFHVV 494
                      66777777666554434599************988766543666666666554 PP

>> PHF5  PHF5-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   3.1   0.00026      0.19      13      76 ..     322     387 ..     315     391 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00026
        PHF5  13 kqpGtaigklce..kcdgkcpicdslv.kpatkvricdecsfgkleekciicgskgvsdayyclecv 76 
                 k+p +++  +    + d  c +c  +  k+++ + +cd c+ g  + kci  +++  sd ++c++c 
  KHJ30796.1 322 KKPTSNVVSISAslEDDTACEVCRRYDsKKKNPMLLCDGCDSGY-HVKCIGLAKEPSSDLWFCEKCK 387
                 5555565555541145789****998746777899******996.679******************5 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00085      0.61       4      38 ..     461     496 ..     458     527 .. 0.75
   2 ?   -2.3   0.0       5.7   4.1e+03     101     118 ..     606     623 ..     541     628 .. 0.48

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00085
      AAA_14   4 ilvitGaRrvGKTtllkqlikell.vkkesilyinl 38 
                  ++i G R +GK+ l+ ++i++    ++e++  + l
  KHJ30796.1 461 SMLIIGSRGTGKSCLVDHVISDISnEHRENFHVVRL 496
                 679*****************8877755555555544 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 5.7
      AAA_14 101 nskllskeiatslagrva 118
                 ++ +l k+++++++ r+ 
  KHJ30796.1 606 AAEMLEKRVKSRFSHRYV 623
                 234555555555555555 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       5.7   4.1e+03      34      64 ..      12      38 ..       4      40 .. 0.69
   2 ?    9.8   0.0    0.0012      0.89       2      31 ..     462     491 ..     461     518 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 5.7
                EEEEEEECGGSGGCTTBTTTTCEEEEEEEE- CS
         Roc 34 vdfltkevtkikgvendkkvkkvklniWDta 64
                 ++ + e+    +vend++ k+ k n W ta
  KHJ30796.1 12 FNYEQDEI----SVENDRRAKRGKANTWETA 38
                44444443....3678888999999***998 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.0012
                 EEEESSTTSSHHHHHHCHCT-CCC-EEETT CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfsekekst 31 
                 ++++G  g+GK++l++++++d  +e++++ 
  KHJ30796.1 462 MLIIGSRGTGKSCLVDHVISDISNEHRENF 491
                 689****************99998887765 PP

>> C1_2  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.3   0.00033      0.24      16      47 .]     336     370 ..     325     370 .. 0.83
   2 ?   -0.5   0.1       2.3   1.6e+03      13      27 ..     375     389 ..     372     393 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00033
        C1_2  16 sesfnCsaCgrk.idgff..YsCseCdfslhvrCa 47 
                 ++++ C++C+r  +++++    C+ Cd   hv+C+
  KHJ30796.1 336 EDDTACEVCRRYdSKKKNpmLLCDGCDSGYHVKCI 370
                 67899*******75555588**************6 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 2.3
        C1_2  13 edssesfnCsaCgrk 27 
                 e+ss+ + C+ C+ +
  KHJ30796.1 375 EPSSDLWFCEKCKPD 389
                 688899999999866 PP

>> Zf_RING  KIAA1045 RING finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   2.9    0.0022       1.6       3      35 ..     336     371 ..     334     387 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0022
     Zf_RING   3 eedelCeiCevytaeelyp...CRvCtkvfHegClr 35 
                 e+d  Ce+C  y ++++ p   C  C+  +H +C+ 
  KHJ30796.1 336 EDDTACEVCRRYDSKKKNPmllCDGCDSGYHVKCIG 371
                 68999****9999988766445888999******85 PP

>> zf-HC5HC2H  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   2.4    0.0012      0.84      14      66 ..     315     370 ..     309     386 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0012
  zf-HC5HC2H  14 eeekeiemeeiedvekikke.rkklkCylCk....kkvGaciqCskkkCkkafHvtCa 66 
                 +++k+ ++ + ++v +i+++ + ++ C +C+    kk+  ++ C+   C + +Hv+C 
  KHJ30796.1 315 AKKKQNKKKPTSNVVSISASlEDDTACEVCRrydsKKKNPMLLCDG--CDSGYHVKCI 370
                 33334456777777777666255678*****888766899****98..*********7 PP

>> Prok-RING_1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   4.2    0.0048       3.4       4      35 ..     338     370 ..     336     376 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0048
  Prok-RING_1   4 gkkCpvCgke.lkeedDiVvCpeCgtpyHraCy 35 
                  +++C+vC++   k+++ +  C+ C + yH +C 
   KHJ30796.1 338 DTACEVCRRYdSKKKNPMLLCDGCDSGYHVKCI 370
                  579****9861566689***************5 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   5.4     0.011       8.1       2      43 ..     340     386 ..     339     387 .. 0.69
   2 ?   -1.8   0.0       5.9   4.2e+03       2      25 ..     703     723 ..     702     726 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.011
   zf-RING_2   2 eCpIC.leelssadsvlll.pCgHvfhreClerwlrssst...CPlC 43 
                  C +C   + ++++ +ll+  C   +h +C+    ++ss    C  C
  KHJ30796.1 340 ACEVCrRYDSKKKNPMLLCdGCDSGYHVKCIGLAKEPSSDlwfCEKC 386
                 6****54555555556655479888*****96666666668887777 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 5.9
   zf-RING_2   2 eCpICleelssadsvlllpCgHvf 25 
                 +C I  ++ls+++ +l   Cg  f
  KHJ30796.1 703 SCIIPISNLSTKRPLL---CGAAF 723
                 7999999998877766...88666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (872 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       770  (0.0429472); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.71u 0.27s 00:00:00.98 Elapsed: 00:00:00.41
# Mc/sec: 6419.71
//
Query:       KHJ30797.1  [L=408]
Description: putative cdp-alcohol phosphatidyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.9e-16   59.3   0.1    4.9e-16   59.3   0.1    3.4  2  CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase


Domain annotation for each model (and alignments):
>> CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.3   0.1   2.7e-20   4.9e-16       1      66 []      46     121 ..      46     121 .. 0.95
   2 ?   -6.4  10.3         1   1.8e+04      26      44 ..     349     389 ..     125     390 .. 0.70

  Alignments for each domain:
  == domain 1  score: 59.3 bits;  conditional E-value: 2.7e-20
                      S-HHHHHHHHHHHHHHHHHGGGS-H.............HHHHHHHHHHHHHTTHHHHHHHHTT---H.HHHHHHHHHH CS
  CDP-OH_P_transf   1 nlPnaiTllrlllsvlailllltyyp...........lvlailllliasltDalDGklARrlnqvst.lGkllDslaD 66 
                      ++Pn+iTl+++ ++++++l+l++++p             +a+ l+l++++ Da+DG +ARr++q s  lG+l+D+++D
       KHJ30797.1  46 MAPNLITLSGFGFIIINVLTLFYFNPtldkdcppwvyASWAVGLFLYQVF-DAVDGTQARRTHQ-SGpLGELFDHGVD 121
                      69*******************99999*********9999*********99.*************.655********99 PP

  == domain 2  score: -6.4 bits;  conditional E-value: 1
                      ..................HHHHHHH......HHHHHHTTHH CS
  CDP-OH_P_transf  26 p................lvlailll......liasltDalD 44 
                                       l +ai ++      +i +++D lD
       KHJ30797.1 349 SsllgtseyqvaysycmLGIAIGVYgsfvvdVIVTICDYLD 389
                      03333333333322222222222225554445888888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       571  (0.0318478); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.20s 00:00:00.66 Elapsed: 00:00:00.36
# Mc/sec: 3361.20
//
Query:       KHJ30798.1  [L=414]
Description: hypothetical protein EV44_g5571 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       903  (0.0503653); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.97
# Mc/sec: 1294.75
//
Query:       KHJ30799.1  [L=120]
Description: hypothetical protein EV44_g5993 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1809  (0.100898); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 874.67
//
Query:       KHJ30800.1  [L=169]
Description: hypothetical protein EV44_g0063 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2067  (0.115288); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                       170  (0.00948185); expected 17.9 (0.001)
Passed Fwd filter:                        50  (0.00278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.92u 0.30s 00:00:01.22 Elapsed: 00:00:00.48
# Mc/sec: 1055.07
//
Query:       KHJ30801.1  [L=216]
Description: hypothetical protein EV44_g0480 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1944  (0.108428); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        98  (0.005466); expected 17.9 (0.001)
Passed Fwd filter:                        30  (0.00167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.78u 0.31s 00:00:01.09 Elapsed: 00:00:00.45
# Mc/sec: 1427.30
//
Query:       KHJ30802.1  [L=113]
Description: hypothetical protein EV44_g4549 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
       0.28   11.5   6.2       0.35   11.2   6.2    1.2  1  SPATIAL       SPATIAL
        1.5    6.8   5.7        1.6    6.7   5.7    1.1  1  Peptidase_S6  Immunoglobulin A1 protease
        4.8    7.3  23.2        5.7    7.1  23.2    1.1  1  AJAP1_PANP_C  AJAP1/PANP C-terminus


Domain annotation for each model (and alignments):
>> SPATIAL  SPATIAL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   6.2   5.9e-05      0.35      77     149 ..       7      78 ..       3     105 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.9e-05
     SPATIAL  77 eelkelaskvalvsketekkke.ekkeepevkrktqySaetGRlippssralsrrsssesrrskasnkektvqi 149
                  el e++++  +v+ et ++++ +++e++  + +t    et R+i++++ ++sr  ++e+++++  +  +t+++
  KHJ30802.1   7 TELTEITETSRIVTTETTETSRiTTTETS--RITTTETMETSRIITTETTETSRIITTETTETSRIITTETMET 78 
                 57777777777777666666654555555..6666666677777777777777777666666655444444433 PP

>> Peptidase_S6  Immunoglobulin A1 protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   5.7   0.00026       1.6     506     547 ..       8      49 ..       2      89 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.00026
                   --EESSTTEEEE---TTS-EEEEE--------GGG---EEE- CS
  Peptidase_S6 506 rirnvdeGarivnhntskvstititGeslitdPnslsvyiid 547
                   ++ ++ e +riv  +t+++s it t  s it  +++ +  i 
    KHJ30802.1   8 ELTEITETSRIVTTETTETSRITTTETSRITTTETMETSRII 49 
                   4668999**************************999776332 PP

>> AJAP1_PANP_C  AJAP1/PANP C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  23.2   0.00096       5.7      18     103 ..      16     107 ..       2     111 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.00096
  AJAP1_PANP_C  18 tvpnitlstkasrtttvatttstttrltqrtltvvt.tpeprrlsttessvse....gktvkppkilgdtsGlavhqiititvslim.viaa 103
                   +   +t++t++sr tt++t+  ttt++++++  ++t t+e+ r+ tte++ ++    ++t+++ +i+++t+ + +  i+ i   + m  +aa
    KHJ30802.1  16 SRIVTTETTETSRITTTETSRITTTETMETSRIITTeTTETSRIITTETTETSriitTETMETFRIMKTTAVMEITEIVEILRIVTMeTVAA 107
                   33446678888999999998888777777666655515677888888877766566678999999999999999999998865555423455 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1170  (0.0652574); expected 358.6 (0.02)
Passed bias filter:                      273  (0.0152267); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 818.86
//
Query:       KHJ30803.1  [L=555]
Description: hypothetical protein EV44_g6530 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.028   14.3   0.7       0.09   12.7   0.7    1.8  1  F-box-like  F-box-like
      0.042   13.7   0.6       0.14   12.0   0.6    1.9  1  F-box       F-box domain


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.7     1e-05      0.09       6      41 ..      36      72 ..      34      77 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1e-05
  F-box-like  6 dEiLlqIFsyLppsdLlr.lalVCrrWrrvaldtplL 41
                dE+ ++IF+  +++ L+  ++l Crr+++++ ++ +L
  KHJ30803.1 36 DELWMRIFELTDARFLSTrARLICRRFKNIIDNCNSL 72
                799*****965888777779***********999877 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.6   1.6e-05      0.14       6      43 ..      34      72 ..      33      77 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.6e-05
                S-HHHHHHHHHTS-HHH.HHHHCTT-HHHHHHHTTHHHH CS
       F-box  6 LPsevlrhILerLplsd.llalrrVSkgwrilidsdrlw 43
                L++e+++ I+e  + +    ++r+ +++++++id+++  
  KHJ30803.1 34 LCDELWMRIFELTDARFlSTRARLICRRFKNIIDNCNSL 72
                899*********99999999**************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3938.00
//
Query:       KHJ30804.1  [L=305]
Description: putative calcium-binding ef-hand protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-12   46.6   3.8    5.5e-06   25.9   0.1    3.2  3  EF-hand_6  EF-hand domain
    8.4e-11   40.6   2.5    0.00012   21.4   0.3    2.7  2  EF-hand_1  EF hand
    4.1e-08   33.6   0.6    1.2e-07   32.1   0.6    1.8  1  EF-hand_7  EF-hand domain pair
    6.1e-07   29.2   0.1    0.00077   19.3   0.0    2.5  2  EF-hand_8  EF-hand domain pair
    3.3e-06   26.3   1.9      0.003   17.0   0.7    2.5  2  EF-hand_5  EF hand
  ------ inclusion threshold ------
      0.038   14.1   0.0      0.079   13.1   0.0    1.5  1  DUF2789    Protein of unknown function (DUF2789)


Domain annotation for each model (and alignments):
>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.1   1.2e-07   0.00036       1      31 []     140     169 ..     140     172 .. 0.92
   2 !   25.9   0.1   1.9e-09   5.5e-06       1      26 [.     210     235 ..     210     245 .. 0.93
   3 ?   -0.8   0.1      0.66     2e+03       4      11 ..     278     285 ..     277     285 .. 0.87

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 1.2e-07
   EF-hand_6   1 elreaFklfDkdgdGkidaeElrkalrkalg 31 
                 elreaF+++D+d dG++ +e++ +++++ lg
  KHJ30804.1 140 ELREAFHILDRDSDGHVGREDVTDMFSQ-LG 169
                 79***********************994.54 PP

  == domain 2  score: 25.9 bits;  conditional E-value: 1.9e-09
   EF-hand_6   1 elreaFklfDkdgdGkidaeElrkal 26 
                 el +aF +fD d++G+id  E+++al
  KHJ30804.1 210 ELISAFSAFDEDDSGQIDLTEFKDAL 235
                 6899********************99 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.66
   EF-hand_6   4 eaFklfDk 11 
                 e+Fk++D+
  KHJ30804.1 278 EVFKYYDF 285
                 79*****5 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.1     3e-07    0.0009       1      28 [.     140     167 ..     140     168 .. 0.93
   2 !   21.4   0.3   3.9e-08   0.00012       1      26 [.     210     235 ..     210     238 .. 0.92

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 3e-07
                 HHHHHHHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1   1 elkeiFrefDkDgdGkIdfeEfkellkk 28 
                 el+e+F ++D+D dG++ +e+  ++++ 
  KHJ30804.1 140 ELREAFHILDRDSDGHVGREDVTDMFSQ 167
                 79********************999975 PP

  == domain 2  score: 21.4 bits;  conditional E-value: 3.9e-08
                 HHHHHHHHHTTTSSSEEEHHHHHHHH CS
   EF-hand_1   1 elkeiFrefDkDgdGkIdfeEfkell 26 
                 el  +F+ fD D +G+Id+ Efk++l
  KHJ30804.1 210 ELISAFSAFDEDDSGQIDLTEFKDAL 235
                 67789******************998 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.6     4e-11   1.2e-07       3      69 ..     140     234 ..     138     236 .. 0.89

  Alignments for each domain:
  == domain 1  score: 32.1 bits;  conditional E-value: 4e-11
   EF-hand_7   3 klkeaFkelDtdgdgyldkeellrllrkifqga..............................gegsklsdeelellfkefDtdkdGvisfdEFlkl 69 
                 +l+eaF  lD+d dg++ +e++ +++ ++  ++                              ++ s+ s  el   f  fD d++G+i+++EF+ +
  KHJ30804.1 140 ELREAFHILDRDSDGHVGREDVTDMFSQLGLSTdpsnistffppsanqtitlpvflnsladilSTISP-S-SELISAFSAFDEDDSGQIDLTEFKDA 234
                 699******************999****99999************************99976444444.3.4699*******************976 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0012       3.7      27      52 ..     140     165 ..     129     168 .. 0.87
   2 !   19.3   0.0   2.6e-07   0.00077      27      52 ..     210     235 ..     195     237 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0012
   EF-hand_8  27 evdilfrefDtdgdGkisfeEFcvll 52 
                 e+++ f  +D+d dG+++ e+  +++
  KHJ30804.1 140 ELREAFHILDRDSDGHVGREDVTDMF 165
                 77888999***********9987776 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 2.6e-07
   EF-hand_8  27 evdilfrefDtdgdGkisfeEFcvll 52 
                 e+ + f++fD+d++G i+++EF + l
  KHJ30804.1 210 ELISAFSAFDEDDSGQIDLTEFKDAL 235
                 56678*****************9976 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0   0.00065       1.9       1      19 [.     141     159 ..     141     162 .. 0.88
   2 !   17.0   0.7     1e-06     0.003       3      23 ..     213     233 ..     211     236 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00065
                 HHHHHHHH-SS-SSCE-HH CS
   EF-hand_5   1 lkdtFqaiDlNgDGkIske 19 
                 l+++F  +D + DG++ +e
  KHJ30804.1 141 LREAFHILDRDSDGHVGRE 159
                 6788**********99776 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 1e-06
                 HHHHHH-SS-SSCE-HHHHHH CS
   EF-hand_5   3 dtFqaiDlNgDGkIskeELkt 23 
                  +F+a+D + +G+I+  E+k 
  KHJ30804.1 213 SAFSAFDEDDSGQIDLTEFKD 233
                 57*****************96 PP

>> DUF2789  Protein of unknown function (DUF2789)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   2.6e-05     0.079       6      28 ..     159     181 ..     155     192 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2.6e-05
                 THHHHHHHHHTS---HHHHHHHH CS
     DUF2789   6 htlseLFeqLGLdsseeaieaFi 28 
                 ++++++F+qLGL  ++++i++F 
  KHJ30804.1 159 EDVTDMFSQLGLSTDPSNISTFF 181
                 67899****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2375.49
//
Query:       KHJ30805.1  [L=441]
Description: putative cop9 signalosome subunit 1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-44  151.8   0.8    3.1e-44  150.8   0.8    1.6  1  RPN7      26S proteasome subunit RPN7
    1.2e-14   54.7   1.6      7e-14   52.2   0.4    2.5  2  PCI       PCI domain
     0.0078   16.3   0.2         25    5.3   0.1    3.5  3  TPR_2     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.061   13.2   0.8         19    5.3   0.1    3.0  3  TPR_1     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.8   0.8   6.8e-48   3.1e-44       1     174 []      89     265 ..      89     265 .. 0.97

  Alignments for each domain:
  == domain 1  score: 150.8 bits;  conditional E-value: 6.8e-48
                 -HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHCT-HHHHHHHHHTCCCC--SHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHH CS
        RPN7   1 DekwveelrkknekeleeLdaelkdakenlgkeeirrakldlaehYlkigdleeAlkaysrireyctslkhkidmllnlirvaiffndwdlvskyleka 99 
                 D++w+  ++kk++ e+++L++elk++k+nl+ke+ir +++dl++hY  igdl++A  a+sr+r++   +kh++d+  +li+v+++ ++w +v ++++k+
  KHJ30805.1  89 DTEWITYMEKKVQVETQRLETELKQYKNNLIKESIRIGNEDLGKHYQAIGDLNKAYDAFSRMRQEANLPKHILDVSCHLIEVSLEQKNWISVISNIQKI 187
                 89************************************************************************************************* PP

                 HCSSS-.--.HHHHHHHHHHHHHHHHHTT-HHHHHHHHCTS-GGGT...TTT--HHHHHHHHHHHHHHH--HHHHHHH CS
        RPN7 100 kellek.ggdwerknrlkvyeGlallairkfkeAaellldilstfts..kellsyedlavyavlcalatldRkdLkak 174
                 k+++++  +d+  +  l + eG+a+l  +kf  Aa ++l+++s +++  + +l  +d+a+y++lcalatl+Rk+L++k
  KHJ30805.1 188 KQVVSTsDEDRALQPLLCAVEGIANLDAGKFLNAATCFLNAESGMGQkfNTILIANDIAIYGGLCALATLERKELETK 265
                 ***99845668888889999*************************99****************************986 PP

>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.22   9.8e+02      26      51 ..      98     123 ..      66     137 .. 0.64
   2 !   52.2   0.4   1.6e-17     7e-14       2     102 ..     281     381 ..     280     382 .. 0.97

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.22
                 HHHHHHHTTHHHHHHHHHHHHHHHHH CS
         PCI  26 eeelladdglaqllesLekkvrerll 51 
                 ++ + + + l++ l++++++++++++
  KHJ30805.1  98 KKVQVETQRLETELKQYKNNLIKESI 123
                 44445555555555566666665555 PP

  == domain 2  score: 52.2 bits;  conditional E-value: 1.6e-17
                 HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTTTE CS
         PCI   2 sysdllkalrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIrdgeirakidqesgi 100
                 ++++ +  + +g++s++  +l+ +  ++  d +l+ ++++ +  +r++++  +  ++s++s+++lak +  +++++Ek l+++I+++ i+a+id ++++
  KHJ30805.1 281 HIRRAITYFINGRYSDCLNILQTYHTDYYLDIYLHNHIDEIYYLIRKKSIVHYLIPFSCVSVDSLAKVFVSPGQDIEKELISMIKSEDINARIDTQNRL 379
                 67888999******************************************************************************************9 PP

                 EE CS
         PCI 101 vv 102
                 ++
  KHJ30805.1 380 LI 381
                 97 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.1    0.0055        25       6      26 ..     129     149 ..     125     154 .. 0.87
   2 ?    1.4   0.0       0.1   4.6e+02       6      27 ..     207     228 ..     202     230 .. 0.85
   3 !    5.2   0.0    0.0061        27       4      22 ..     281     299 ..     278     303 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0055
       TPR_2   6 nlGlayyklgdyeeAleafek 26 
                  lG+ y + gd+++A +af +
  KHJ30805.1 129 DLGKHYQAIGDLNKAYDAFSR 149
                 699***************987 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.1
       TPR_2   6 nlGlayyklgdyeeAleafekA 27 
                   G a + +g++  A+ +f  A
  KHJ30805.1 207 VEGIANLDAGKFLNAATCFLNA 228
                 5799999************877 PP

  == domain 3  score: 5.2 bits;  conditional E-value: 0.0061
       TPR_2   4 lynlGlayyklgdyeeAle 22 
                 + +++  y+ +g+y ++l+
  KHJ30805.1 281 HIRRAITYFINGRYSDCLN 299
                 899***********99886 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.1    0.0042        19       7      26 ..     130     149 ..     129     150 .. 0.87
   2 ?   -2.6   0.0       1.3   5.9e+03       8      27 ..     209     228 ..     209     228 .. 0.79
   3 ?    4.9   0.0    0.0054        24       4      21 ..     281     298 ..     279     302 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0042
                 HHHHHHHTT-HHHHHHHHHH CS
       TPR_1   7 lGnayfklgkydeAleyyek 26 
                 lG  y+  g++++A +++++
  KHJ30805.1 130 LGKHYQAIGDLNKAYDAFSR 149
                 78889999999999999986 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.3
                 HHHHHHTT-HHHHHHHHHHH CS
       TPR_1   8 GnayfklgkydeAleyyekA 27 
                 G a +  gk+  A  ++  A
  KHJ30805.1 209 GIANLDAGKFLNAATCFLNA 228
                 66778889999999999765 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.0054
                 HHHHHHHHHHTT-HHHHH CS
       TPR_1   4 lynlGnayfklgkydeAl 21 
                 + +++ +yf +g+y ++l
  KHJ30805.1 281 HIRRAITYFINGRYSDCL 298
                 679***********9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       774  (0.0431703); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3055.67
//
Query:       KHJ30806.1  [L=375]
Description: putative cyclin ccl1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.2e-36  122.6   3.6    7.2e-33  113.1   0.1    2.7  2  Cyclin_C_2  Cyclin C-terminal domain
    8.9e-06   25.5   0.4    1.6e-05   24.6   0.4    1.5  1  Cyclin_N    Cyclin, N-terminal domain
  ------ inclusion threshold ------
      0.037   14.1   0.0       0.11   12.6   0.0    1.8  1  TFIIB       Transcription factor TFIIB repeat


Domain annotation for each model (and alignments):
>> Cyclin_C_2  Cyclin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.5   0.00017         1      23      77 ..     102     155 ..      27     173 .. 0.84
   2 !  113.1   0.1   1.2e-36   7.2e-33       1     104 []     183     298 ..     183     298 .. 0.96

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00017
  Cyclin_C_2  23 riekaykrareilkssalltDayflytPsqIalaallladeklaerYleeklgke 77 
                  ++ ++++a ++lk + ++t+ ++ y P  I   al+ a ++ +  +  +k+ + 
  KHJ30806.1 102 LPSDVKATAIQFLK-RFYVTNSLMTYHPTDILKTALFFATKTENYYFHLTKFAEA 155
                 5677889999****.***********************99988866556666553 PP

  == domain 2  score: 113.1 bits;  conditional E-value: 1.2e-36
  Cyclin_C_2   1 hPfRpLeGflldLkal..................gkslekriekaykrareilkssalltDayflytPsqIalaallladeklaerYleeklgkeesse 81 
                 hP+R+LeG++++L+a+                  +k++e+r+++a+ +are+lkss+lltDayf+ytPsqI++aal+ ad++la +Yl++kl   e ++
  KHJ30806.1 183 HPYRALEGAIMELQAIskkqipilpgksdiilekPKNMERRVKEAHGKAREFLKSSSLLTDAYFHYTPSQIMMAALVNADKDLAIWYLDKKLTDVEPAD 281
                 9*******************************************************************************************8876555 PP

  Cyclin_C_2  82 ksaksellekllktiescrkllk 104
                       + ek+l ti++c+ +lk
  KHJ30806.1 282 ------IKEKILGTIHACAYMLK 298
                 ......48************996 PP

>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.4   2.8e-09   1.6e-05      38     125 ..      93     178 ..      61     180 .. 0.84

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 2.8e-09
                 HHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHSSS---HHHHHHHTTTSS-HHHHHHHHHHHHHHTTT- CS
    Cyclin_N  38 lvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKveeisppkledlvyitdeafteeeilemErliLetLnfd 125
                  +++  +++l +++ ++a+++l Rf+ ++s+  ++   +  t+L+ A+K+e+    +l +++ +++   + e++l  E  + + L f 
  KHJ30806.1  93 TLQLGDHLNLPSDVKATAIQFLKRFYVTNSLMTYHPTDILKTALFFATKTENY-YFHLTKFAEAIG-KTKTEDVLASEFILTQGLRFT 178
                 5688999*******************************************888.699999999987.667899999999999999885 PP

>> TFIIB  Transcription factor TFIIB repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.8e-05      0.11       4      53 ..      96     145 ..      94     160 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.8e-05
                 HHHHTT--HHHHHHHHHHHHHHTTSTTTTSGCTTHHHTTHHHHHHTTTTS CS
       TFIIB   4 fadaleLpekVadaAkelaklaleekvlkGrspagiaAAclyiAcrkeev 53 
                 + d+l+Lp  V+  A + +k+ +  + l    p+ i+ ++l+ A++ e+ 
  KHJ30806.1  96 LGDHLNLPSDVKATAIQFLKRFYVTNSLMTYHPTDILKTALFFATKTENY 145
                 569*******************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       687  (0.0383178); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 2928.71
//
Query:       KHJ30807.1  [L=187]
Description: hypothetical protein EV44_g3637 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1508.40
//
Query:       KHJ30808.1  [L=464]
Description: putative udp-galactose transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.4e-98  329.2  16.9    3.5e-98  328.6  16.9    1.1  1  Nuc_sug_transp  Nucleotide-sugar transporter
    1.8e-07   30.7  13.5      3e-05   23.4   7.0    2.2  2  UAA             UAA transporter family
    0.00014   22.1  31.7    0.00084   19.5   9.3    2.4  2  EamA            EamA-like transporter family


Domain annotation for each model (and alignments):
>> Nuc_sug_transp  Nucleotide-sugar transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  328.6  16.9  5.9e-102   3.5e-98       4     315 .]      12     388 ..      10     388 .. 0.94

  Alignments for each domain:
  == domain 1  score: 328.6 bits;  conditional E-value: 5.9e-102
  Nuc_sug_transp   4 klkyislvvlvvqnaslvltlrYartk..edkerylsttavllaeilklvvclllllkeekskv..kkllrelkkeilakp..kdtlklavPsli 92 
                      +k +sl++l++qn++l+l+++Y+r +  + ++ry+++tav+l+e++kl ++l+++l+e   ++  +   ++l +++  +    d +kla+P+++
      KHJ30808.1  12 PMKHLSLITLTFQNSALILVMHYSRVMptQSGSRYFTSTAVFLNEVIKLAISLTIALYEISWTLpiSTPATTLFEQLYMSVfsGDGWKLAIPATL 106
                     69***********************9988899**************************99877644444445555544443338*********** PP

  Nuc_sug_transp  93 YtvqnnllyvalsnLdaatyqvtyqlkilttalfsvllLkrklskkqWlslllLvaGvalvqlkqkeseesekaaaaa................. 170
                     Yt+qn l+y+a+snLda  +q+ yqlkilttalfsv++L++ l++k+W++l+lL++Gv +vql +++s+   + ++++                 
      KHJ30808.1 107 YTLQNSLQYIAVSNLDAVHFQILYQLKILTTALFSVIMLGKALTTKRWTALVLLTLGVCIVQLPTTKSDLGLSLENTQnkfyfprsfhelgqlsd 201
                     ********************************************************************9888766666789************** PP

  Nuc_sug_transp 171 .......................................keensvlGliavlaacllsgfaGvYfekiLkdsnv..slWirniqlallsiilall 224
                                                               n+ +G++avl+a ++sg+ GvYfek+Lk+s++  ++W rn+ql+++s++ +l+
      KHJ30808.1 202 gavevareltkrgieslsnnhikrsatyegiqedlglvkPLMNYTMGVTAVLVAAIISGLTGVYFEKVLKESSThvTVWTRNVQLSFYSLFPSLI 296
                     *************************************98889****************************99765599*************9987 PP

  Nuc_sug_transp 225 .tvllkdgskisekGffkGydlvvwvvvllqavGGlvvavvvkyaDnilkgfatslaiilstvasvllldlkitllFllGallviaavflYs 315
                      +v+lkdg++i++ Gff Gy+ vvw++++ qavGG++va++++yaDni k+fats++iils ++sv  ++++it   ++G+ +v  a++lYs
      KHJ30808.1 297 fGVFLKDGEAIAKYGFFSGYNAVVWTAIVFQAVGGVLVAMCINYADNIAKNFATSISIILSFIISVWSFNFQITQNSIFGTAIVSYATYLYS 388
                     3699***************************************************************************************7 PP

>> UAA  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.4   2.2e-05      0.13      77     141 ..     118     175 ..      48     208 .. 0.69
   2 !   23.4   7.0   5.1e-09     3e-05     149     300 ..     242     389 ..     217     391 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.2e-05
         UAA  77 vlnnealkydisvPvhiifrssklipvmilGililgkrYsllqylsvllltlGviiftllsakdk 141
                 v n  a+ +      +i+    k++++ + ++++lgk  +    ++++lltlGv i+ l ++k++
  KHJ30808.1 118 VSNLDAVHF------QILY-QLKILTTALFSVIMLGKALTTKRWTALVLLTLGVCIVQLPTTKSD 175
                 333333333......3322.245556666666666666666666777888888888877666665 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 5.1e-09
         UAA 149 lnkfllGiallvlallldavlglvqeklykkygkh...sk...ealfyshllslplfl.llqgellsavkflsesedvallslpsklfylllnvltqyv 240
                 l++ ++G++ +++a ++++++g++ ek+ k+   h   +    +  fys + sl++ + l  ge + ++ f+s  + v        ++ +    + q+v
  KHJ30808.1 242 LMNYTMGVTAVLVAAIISGLTGVYFEKVLKESSTHvtvWTrnvQLSFYSLFPSLIFGVfLKDGEAIAKYGFFSGYNAVV-------WTAI----VFQAV 329
                 567899************************98877444331236669*******9987477789999999999988888.......3333....34555 PP

         UAA 241 cikgVlilisefgaltvtlvltlRKfvslllSillFknpltlqhlvgtllVflglllysy 300
                 +   V + i+  +  +    +++  ++s ++S++ F+ ++t + ++gt++V  +++lys+
  KHJ30808.1 330 GGVLVAMCINYADNIAKNFATSISIILSFIISVWSFNFQITQNSIFGTAIVSYATYLYSS 389
                 555555555555555555555666678******************************986 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   9.3   1.4e-07   0.00084      29     135 ..      62     167 ..      42     169 .. 0.79
   2 !    8.3  14.5    0.0004       2.4       2     134 ..     247     386 ..     246     389 .. 0.79

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 1.4e-07
        EamA  29 spltltfvrfliagillliiallkegkl.aklslkdwllllllgllgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltlkqllgiv 126
                  +lt++ + +     +  + + l+e+   +++s  +w+l  + ++l+ +l ++l+++a+++++a    ++  l  + t+++sv+ lg+ lt k + ++v
  KHJ30808.1  62 ISLTIALYEISWTLPISTPATTLFEQLYmSVFSGDGWKLA-IPATLY-TLQNSLQYIAVSNLDAVHFQILYQLKILTTALFSVIMLGKALTTKRWTALV 158
                 5666666666666777777777777766777888887774.444444.45669********************************************** PP

        EamA 127 lillGvlli 135
                 l  lGv+++
  KHJ30808.1 159 LLTLGVCIV 167
                 ******987 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0004
        EamA   2 lgillallaalfwaiyfvlskillrkvspltltfvrfl....iagillliiallkegklaklslkd...wllllllgllgtvlafllffyalkktsasn 93 
                 +g+  +l+aa+++++++v+  ++l++ s+  ++  r +     + +  li+ ++ +   a  ++     + +++ ++++  +++ +l  + +++ +   
  KHJ30808.1 247 MGVTAVLVAAIISGLTGVYFEKVLKESSTHVTVWTRNVqlsfYSLFPSLIFGVFLKDGEAIAKYGFfsgYNAVVWTAIVFQAVGGVLVAMCINYADNIA 345
                 68999***************9998887665444433332111455555777666666664555544666888899999999999999999999999999 PP

        EamA  94 aslitslePvftlilsvlllgekltlkqllgivlillGvll 134
                   ++ts++ +++ i+sv+ ++ ++t  +++g++++  +++l
  KHJ30808.1 346 KNFATSISIILSFIISVWSFNFQITQNSIFGTAIVSYATYL 386
                 9********************************99887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.36
# Mc/sec: 3828.06
//
Query:       KHJ30809.1  [L=1366]
Description: putative meiotic helicase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-31  109.8   0.2    2.6e-31  108.7   0.1    1.6  2  Sec63       Sec63 Brl domain
    3.2e-26   92.1   0.1    1.1e-25   90.4   0.0    1.9  2  DEAD        DEAD/DEAH box helicase
    3.7e-14   53.1   3.1      1e-13   51.6   0.0    3.0  3  ResIII      Type III restriction enzyme, res subunit
    5.3e-07   30.0   0.0    6.7e-06   26.4   0.0    2.7  2  Helicase_C  Helicase conserved C-terminal domain
     0.0065   16.8   0.0      0.035   14.4   0.0    2.3  3  AAA_22      AAA domain
  ------ inclusion threshold ------
      0.033   14.5   0.1       0.11   12.9   0.0    1.8  2  AAA_19      AAA domain
      0.065   13.8   0.0       0.18   12.5   0.0    1.7  1  HHH_5       Helix-hairpin-helix domain
      0.089   11.8   0.0        0.2   10.7   0.0    1.5  1  T2SSE       Type II/IV secretion system protein


Domain annotation for each model (and alignments):
>> Sec63  Sec63 Brl domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0       2.9   6.6e+03      84     128 ..     282     324 ..     282     331 .. 0.80
   2 !  108.7   0.1   1.1e-34   2.6e-31       1     250 [.     696    1007 ..     696    1014 .. 0.90

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 2.9
                 HHHHTT---SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63  84 qayisrlklegsdlvsDlkyilqnairilralveillskgwlsla 128
                 q  +s l+l+  +l+ D+++  ++++r+ +a + +++ ++w s++
  KHJ30809.1 282 QKKFSHLNLSCAELTGDTNK--SEMTRVRNASIIVTTPEKWDSIT 324
                 67799999999999999996..78888888888888888887765 PP

  == domain 2  score: 108.7 bits;  conditional E-value: 1.1e-34
                  ECHHHHHHHHHT--HHHHHHHHHHS-TT--HHHHHHHHHTSGGGGGS---TTHHHHHHHHHHT..SSS--SSSTTSHHHHHHHHHHHHHTT---SS. CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
       Sec63    1 ptelGriaShYyisyetiklfneslkpnttlkdlLeilssasEFeeipvReeEkkelkkLlek..vpikvkediespeaKvniLlqayisrlkleg. 94  
                  +te+G+ + +Y +++et+k++ + + ++ +l+++L+i+++a+EF+++++++ E++ lkkL+++  v+++++e++ ++  Kv++++q +++ ++ ++ 
  KHJ30809.1  696 CTEYGEAMCRYMVRFETMKTLLS-IPEKASLEQILKIICHATEFKDLRMKPAERTCLKKLNQSpfVKFPINESVITSAHKVFLIIQIQLGGVQCPDe 791 
                  699******************77.99***********************************999999999*************************** PP

                  .......HHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHTS-TT....................................... CS
                  .......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................................... RF
       Sec63   95 .......sdlvsDlkyilqnairilralveillskgwlslalslleLskmveqrlwds....................................... 145 
                          ++  D  +i++++ r++r++++  + ++++  + ++l+L++ +    w++                                       
  KHJ30809.1  792 kefgvfrRQFLIDKRIIFERIHRLIRCVIDCKAFDRDAVSTRNALDLARGLSAEYWEKsnlqlrqvpqigpvahrklchanintvekfgaldtasie 888 
                  ******99************************************************888************************************** PP

                  ...................S--EEEEEEE......CEBTTSEEEEEEEEEESSSS-SCTSSS-CHTSBEEEEEEEEETTTTEEEEEEEEEESSTTTT CS
                  ...................xxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63  146 ...................lPkleieaev......qpitrsklrvevtiereeeeskpdfpwdkkgksekfwlvvedsendellaikrvtlekkkla 217 
                                     +P+l+i+a++          ++k +++++   + e+++    w+    +++ ++++ +s++ el +i r  +++    
  KHJ30809.1  889 rilsknppygkkmkdilasFPRLKISATIikkilmG--IKNKPQIHMRAILNYENDN-VPIWNH---RKPAVVFIAESSGGELSHIWRGNINNL--- 976 
                  ****************************99887443..4444455554442233333.336888...99*******************888543... PP

                  TEEEEEEEEEEE-.SSCCEEEEEEEEESSSSS- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63  218 stqevkleftvplsepgpkqltvrlisdswlgl 250 
                   ++ ++l+ftv l ++ ++++ +++ ++  +g 
  KHJ30809.1  977 -EKGYELKFTVTL-SRVEEEIRCWVACEDIVGT 1007
                  .456789999977.555**********988775 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.4   0.0   4.9e-29   1.1e-25       2     171 ..     216     381 ..     215     385 .. 0.88
   2 ?   -2.9   0.0       2.2     5e+03      45      77 ..     710     742 ..     666     756 .. 0.79

  Alignments for each domain:
  == domain 1  score: 90.4 bits;  conditional E-value: 4.9e-29
                 HHHHHHHHHHH.TTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCS CS
                 xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplil.gggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvd 99 
                 ++Q++++ +i  ++++++v+a+TGsGKT  f +++++iv e   +++ k+++++Pt++L+ q +++++k +++++l++ + ++g++ +++++++ +++ 
  KHJ30809.1 216 AVQSKCFGTIHnTDDNLVVSAPTGSGKTVLFELAICRIV-EICPSEQFKIVYLAPTKSLCSQRARDWQKKFSHLNLSC-AELTGDTNKSEMTRV-RNAS 311
                 68999999**94446899******************888.55799999************************988766.577889999******.99** PP

                 EEEEEHHHHHHHH..HCTSSH.CTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSH CS
                 xxxxxxxxxxxxx..xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 100 ivvgtpgrlddll..stgkln.lsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpk 171
                 i+v+tp+++d+++  +t + + ++ v+++ +DE++ l d  ++ ++++++++++   ++ +    +i+lSAT+p+
  KHJ30809.1 312 IIVTTPEKWDSITrkWTDHYRlVQLVKLFLIDEVHILKDP-RGATLEAVVSRMKAVGARIR----FIALSATVPN 381
                 ***********998867777746667*************9.************76666654....********93 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.2
                 STS-EEEEEESSHHHHHHHHHHHHHHTTTSTSE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  45 ktgpkalivePtreLaeqtlnnlkkfkkyidlr 77 
                  ++ k+l+  P ++  eq+l+ +   +++ dlr
  KHJ30809.1 710 FETMKTLLSIPEKASLEQILKIICHATEFKDLR 742
                 567888889999999999888776666655555 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   0.0   4.7e-17     1e-13      21     170 ..     223     380 ..     202     381 .. 0.79
   2 ?   -4.1   0.0       5.9   1.3e+04      52      85 ..     710     749 ..     702     783 .. 0.61
   3 ?   -0.2   0.2      0.39   8.8e+02     108     146 ..    1156    1206 ..    1096    1222 .. 0.59

  Alignments for each domain:
  == domain 1  score: 51.6 bits;  conditional E-value: 4.7e-17
                 .....TTSEEEEEESTTSTHHHHHHHHHHHH-S.......-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHH CS
      ResIII  21 s...krdkrglikmaTGtGKTlvaaklierllkkgkee..kflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqsl 114
                     + d ++++ ++TG+GKT++   +i r+ +  + e  k++ l+p+ksl++q  ++++k +s  +   + +++gd++k+++ +  n++i+vtt ++ 
  KHJ30809.1 223 GtihNTDDNLVVSAPTGSGKTVLFELAICRIVEICPSEqfKIVYLAPTKSLCSQRARDWQKKFSHLNL-SCAELTGDTNKSEMTRVRNASIIVTTPEKW 320
                 1444889999**************5555555555444448*******************999988755.9***********9***************** PP

                 HHTH........HHHTTT-SEEEEETGGGTTS...TTTHHHHHT---....SEEEEEESS-S CS
      ResIII 115 dadseeeeeeseellrdrfdviiiDEaHrlgak..kswreilekfke....avllglTATpe 170
                 d++   ++ +++  l +  ++++iDE+H l++   ++ ++++  +k+       ++l+AT +
  KHJ30809.1 321 DSIT--RKWTDHYRLVQLVKLFLIDEVHILKDPrgATLEAVVSRMKAvgarIRFIALSATVP 380
                 ****..34455555666677***********9755478887666655555588899999975 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 5.9
                 ....-EEEEESSHHHHHHHH......HHGGGGTGG....G CS
      ResIII  52 gkeekflflvprkslleqtl......eefkkflseaykei 85 
                 ++  k+l+ +p+k+ leq l      +efk++  ++++++
  KHJ30809.1 710 FETMKTLLSIPEKASLEQILkiichaTEFKDLRMKPAERT 749
                 4455788888888888888877777777777777766542 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.39
                  EEEHHHHHHTH....................HHHTTT-SEEEEETGGGTTS CS
      ResIII  108 vttiqsldadseee............eeeseellrdrfdviiiDEaHrlga 146 
                   +t ++++ +s+e+            +  +   ++ +++ i +DE H+l +
  KHJ30809.1 1156 NFTNDKITPISREDyessmrhetvfsTISDIGTDEMSELSIMFDENHNLDY 1206
                  444444444443333332222222222222222224444899999998876 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.82   1.8e+03      13      57 ..     258     306 ..     248     311 .. 0.73
   2 !   26.4   0.0     3e-09   6.7e-06       6     109 ..     438     578 ..     434     580 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.82
                 TTTTSEEEEEESSHHHHHH.HHHHHHHT...TSTEEEESTTSTHHHHHH CS
  Helicase_C  13 eeeggkilifvntidrlek.vklllekk...gikvavlhgelpqneree 57 
                  +e+ ki+  ++t++ +++ ++  ++k+   ++++a l+g+++++e  +
  KHJ30809.1 258 PSEQFKIVYLAPTKSLCSQrARDWQKKFshlNLSCAELTGDTNKSEMTR 306
                 56788999999999977666444445555568*********99998665 PP

  == domain 2  score: 26.4 bits;  conditional E-value: 3e-09
                 HHHHHHHTTTTSEEEEEESSHHHHHHHHHH............................HHHT...TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEES CS
  Helicase_C   6 llellkleeeggkilifvntidrlekvkll............................lekk...gikvavlhgelpqnereeileqfnkgesdvLiat 73 
                 l+ ll++  +++ ++if+ t++++e + l+                            l  +      +a +h+ l +++r +i + + kg + ++ +t
  KHJ30809.1 438 LISLLQKYTHRKPTMIFCFTRKSCEATALMlsewwtrqgaadrvwsspfqkvivgnmeL--QkvvVCGIAFHHAGLDSQDRHAIEDGYLKGAISIICCT 534
                 7788888999************9977444456666777777777777666666766532..23577888999*************************** PP

                 GGGTSSSTSTTESEEEESSSS.........SSHHHHHHHHTTSSS CS
  Helicase_C  74 dvaerGidipkvnlVinfdlp.........rnvtsyiqriGRtgR 109
                 + ++ G+++p+  +V               ++  +++q+ GR+gR
  KHJ30809.1 535 STLAVGVNLPCHIVVLKG-TVgfqdgilreYSDLEVMQMLGRAGR 578
                 **********65555543.333556666444448999*******9 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   1.6e-05     0.035       4     117 ..     228     364 ..     225     378 .. 0.78
   2 ?   -3.6   0.0       5.7   1.3e+04      31      64 ..     943     976 ..     935     981 .. 0.71
   3 ?   -3.1   0.0         4     9e+03      79     113 ..    1180    1222 ..    1160    1231 .. 0.67

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.6e-05
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst.sskdl.lrellralglelka.....................erlsseell 79 
                 t+  lvv +++G+GKT+l +    + +  +    e+ ++v+  +++s  s++   +++ ++ l+l++ +                      + + + + 
  KHJ30809.1 228 TDDNLVVSAPTGSGKTVLFELAICRIV--EICPSEQFKIVYLAPTKSLcSQRARdWQKKFSHLNLSCAEltgdtnksemtrvrnasiivtTPEKWDSIT 324
                 566799****************99984..333336777776655555456666569*********9999***99999**99999998887777777777 PP

      AAA_22  80 ealeqalraravielliiDEaqhlr..seealeeLrslln 117
                 ++ +++ r  + ++l++iDE++ l   + + le ++s+++
  KHJ30809.1 325 RKWTDHYRLVQLVKLFLIDEVHILKdpRGATLEAVVSRMK 364
                 8888888877779***********7655888888888776 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 5.7
      AAA_22  31 eeakaeeerpevvfvtlpsstsskdllrellral 64 
                 +++  ++++p vvf+  +s+++++ ++r   ++l
  KHJ30809.1 943 NVPIWNHRKPAVVFIAESSGGELSHIWRGNINNL 976
                 4444444788899999999999999988666665 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 4
      AAA_22   79 lealeqalraravielliiDEaqhlr.....s...eealeeLr 113 
                  ++++ +   + +    ++ DE ++l+     s    + le+ +
  KHJ30809.1 1180 FSTISDIGTDEMSELSIMFDENHNLDysipeSplqSTSLEDSK 1222
                  5555555555556666899999999885543145566666655 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   4.8e-05      0.11      10      57 ..     229     276 ..     222     368 .. 0.63
   2 ?   -4.0   0.0       7.5   1.7e+04      34      56 ..     442     462 ..     438     468 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.8e-05
      AAA_19  10 ekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAake 57 
                 +++l+v a+ G+GKT + + ++  +ve+   +  +i+ +a+t+  +++
  KHJ30809.1 229 DDNLVVSAPTGSGKTVLFELAICRIVEICPSEQFKIVYLAPTKSLCSQ 276
                 67899************************999**********865443 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 7.5
      AAA_19  34 lvelggvkpeeillvaftgrAak 56 
                 l++ +++  ++ ++ +ft+++++
  KHJ30809.1 442 LQKYTHR--KPTMIFCFTRKSCE 462
                 4455544..78899999999986 PP

>> HHH_5  Helix-hairpin-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   7.9e-05      0.18       4      40 ..     854     890 ..     852     900 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 7.9e-05
                 HHTSTT--HHHHHHHHTTT--SHHHHHHS-HHHHHTS CS
       HHH_5   4 LlsvsGiGpktAlallsaGiesvedlaaadveeLaki 40 
                 L +v+ iGp+  ++l+ a i++ve++ a+d++ + +i
  KHJ30809.1 854 LRQVPQIGPVAHRKLCHANINTVEKFGALDTASIERI 890
                 789*********************9999998887766 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0     9e-05       0.2     115     153 ..     218     253 ..     187     266 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 9e-05
       T2SSE 115 kekiaevlrkavrerglilvsGgTgsGKttllyallkei 153
                 + k+  ++++      +++vs +TgsGKt+l   ++  i
  KHJ30809.1 218 QSKCFGTIHNT---DDNLVVSAPTGSGKTVLFELAICRI 253
                 55555555666...889*************987666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1366 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.82u 0.27s 00:00:01.08 Elapsed: 00:00:00.45
# Mc/sec: 9128.97
//
Query:       KHJ30810.1  [L=343]
Description: hypothetical protein EV44_g3573 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.8e-05   22.5   2.0    0.00014   21.7   0.3    2.2  2  gag_pre-integrs  GAG-pre-integrase domain
  ------ inclusion threshold ------
      0.013   15.7   0.0      0.031   14.5   0.0    1.7  1  rve              Integrase core domain
      0.043   13.9   0.4      0.089   12.9   0.4    1.5  1  Integrase_H2C2   Integrase zinc binding domain


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.34     2e+03      29      34 ..     169     174 ..     164     177 .. 0.92
   2 !   21.7   0.3   2.3e-08   0.00014      22      64 ..     198     244 ..     175     247 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.34
  gag_pre-integrs  29 rRLGHp 34 
                      rR+GHp
       KHJ30810.1 169 RRFGHP 174
                      8****9 PP

  == domain 2  score: 21.7 bits;  conditional E-value: 2.3e-08
  gag_pre-integrs  22 ssinlWHrRLGHpsfsrlkkLfk....kgllpglkisksevCeaCql 64 
                      +++++ HrR+GHp   rl++L +    ++++ g  +    +Ce Cq+
       KHJ30810.1 198 TELRRLHRRFGHPAAHRLQRLLEraghNDINYGEIKRLTDFCEQCQK 244
                      678899****************9544433433322233668****96 PP

>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   5.2e-06     0.031      15      86 ..     273     337 ..     234     339 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 5.2e-06
         rve  15 vripdgggkayllvvvddfsrlilaealsdemdastvlallera.varfggvepervlsDngseytskafref 86 
                 ++      ++ +l+++d ++r+  a  ls++ ++++v ++l  a +  + g  p+++++D g+ +  k+f ++
  KHJ30810.1 273 ID------NSPILHIIDEATRYQAAQWLSNM-TSEHVWDTLCYAwINTYLGP-PDYIITDAGKNFLGKNFLKL 337
                 33......67899**********99999999.66666666664415555555.*************9998776 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.4   1.5e-05     0.089      10      56 ..     200     246 ..     195     248 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.5e-05
  Integrase_H2C2  10 lkeaHdsagHlGiektlerlrrryyWpgmrkdvkkyvksCetCqrrk 56 
                     l+++H   gH+ +++  ++l r  +    + ++k+  + Ce+Cq++ 
      KHJ30810.1 200 LRRLHRRFGHPAAHRLQRLLERAGHNDINYGEIKRLTDFCEQCQKHG 246
                     899*****************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2441.20
//
Query:       KHJ30811.1  [L=317]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-05   23.2   1.3    4.8e-05   23.2   1.3    2.5  2  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   1.3   2.7e-09   4.8e-05       2      17 ..     141     156 ..     141     157 .. 0.95
   2 ?   -1.5   0.6      0.17   3.1e+03       3       6 ..     181     184 ..     180     186 .. 0.82

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 2.7e-09
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +C+nC++ GHia+ C+
  KHJ30811.1 141 QCFNCQKYGHIAKICT 156
                 6**************8 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.17
                 TSSS CS
     zf-CCHC   3 CynC 6  
                 C nC
  KHJ30811.1 181 CSNC 184
                 99*9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       806  (0.0449551); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2247.94
//
Query:       KHJ30812.1  [L=435]
Description: putative mfs monocarboxylate transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-16   60.8  47.3    3.3e-16   59.2  44.9    2.0  2  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2  44.9   1.8e-20   3.3e-16       7     352 ..      54     387 ..      44     388 .. 0.77
   2 !   10.5   1.6   1.2e-05      0.21       7      75 ..     347     414 ..     346     428 .. 0.65

  Alignments for each domain:
  == domain 1  score: 59.2 bits;  conditional E-value: 1.8e-20
       MFS_1   7 lsalarsilgpalplalaedlg......ispseigllltlyalgaavaslplGrlsdr.fGrrrvlllglllfalglllllfasslw.lllvlrvlqGl 97 
                 ++  ++++++++     ++ ++       ++s+i+++ +l  ++ ++   + G l d  f +r+++l g ll ++gll+ +fa+++w l++   +  Gl
  KHJ30812.1  54 IMLNTWGLINSFG--VFQTYYHqtllpnNDHSSISWIGSLQVFLLFFIGAFSGNLLDMgF-SRSLFLNGSLLIVIGLLMTSFATTYWqLFFSQGICIGL 149
                 3333333333333..334444466666679999*******9999999999*******655.888************5555599****99999999**** PP

       MFS_1  98 gagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllll.peepperkrkspkeeekgtgpap 195
                 g g+lf  ++++++ +f+  +r+ a+g+ ++g+++G i+ p+l + l+  +g++++  ++a++ ++++   ++ + +++++++k++ +           
  KHJ30812.1 150 GNGLLFCPSLSVLTTYFTS-KRSIAMGICASGSAIGGIIFPALFSNLLPVIGFSWTIRAAALIEFVCLA--ICNIgLRSRVPPKKSGGF---------- 235
                 ******************9.***********************************************44..355523344444444333.......... PP

       MFS_1 196 lvpawkallkdpvlwillialllfffgfsglltllplylqevlglsglllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglall 294
                  ++ + +l+ + +++ + ++++++ +g++++  ++ ly+ + l+ls    ++ ll++l  +g+i+++   +l+d +     l++ +++++l+ ++ + +
  KHJ30812.1 236 -ID-IDSLKDKSYIL-FTLGMFFNLWGVYFAAHYISLYASTILKLS-SKDSSNLLMVLNGIGLIGRIAPNFLADFYAG--SLNVLIIVCILSGIMNFCW 328
                 .34.77899999887.66666666679999****************.4555556999999999999999999998665..6666666666666666655 PP

       MFS_1 295 avtssavllllvlvliGfglgfvfpsllalasdla.ppeeagtasglfntagslggalg 352
                  + s+ + l+   v++G+ ++ v++++ a++s+l+   +++gt +g + t+ sl ++ g
  KHJ30812.1 329 VAVSDRTGLYSWAVFYGIVSAAVQSLYPAALSNLTkDMSKSGTRTGMVLTFISLTALTG 387
                 55556666666678888888888666666666555323999999999999999988766 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 1.2e-05
       MFS_1   7 lsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg 75 
                 +sa+  s++ +al+  l++d   s++  g++lt+ +l+a+ +++++G l++r   + ++   + +++l+
  KHJ30812.1 347 VSAAVQSLYPAALS-NLTKDMSKSGTRTGMVLTFISLTALTGAPIAGELIERQNGKYMYAQVFSGLSLM 414
                 45666666666676.899999999999999999999999999999999999853333433222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      232  (0.0129399); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3097.12
//
Query:       KHJ30813.1  [L=392]
Description: putative multidomain presynaptic cytomatrix related protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.9e-27   92.5   3.0    1.7e-26   91.8   3.0    1.4  1  Atg29_N   Atg29 N-terminal domain


Domain annotation for each model (and alignments):
>> Atg29_N  Atg29 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.8   3.0   9.5e-31   1.7e-26       1      54 []      23      76 ..      23      76 .. 0.99

  Alignments for each domain:
  == domain 1  score: 91.8 bits;  conditional E-value: 9.5e-31
     Atg29_N  1 ytVfiRLPfpRgdFvDPPpveWdaekdeaLWkilskaskkkeiDWkelaeefev 54
                y+VfiR+PfpR dFvDPP v+Wda+kd++LWkils++sk+++iDW++la +f+v
  KHJ30813.1 23 YIVFIRVPFPRSDFVDPPFVDWDAAKDKQLWKILSNTSKNSNIDWNKLAMKFDV 76
                89**************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       846  (0.0471861); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 2948.06
//
Query:       KHJ30814.1  [L=1881]
Description: putative sister chromatid cohesion protein mis4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.4e-41  140.4   1.1    6.4e-41  140.4   1.1    3.2  5  Nipped-B_C    Sister chromatid cohesion C-terminus
    5.5e-05   23.3   5.3      0.007   16.4   0.0    4.5  4  Cnd1          non-SMC mitotic condensation complex subunit 1
      0.001   19.3   3.1     0.0059   16.9   0.1    3.1  3  Cohesin_HEAT  HEAT repeat associated with sister chromatid co
  ------ inclusion threshold ------
      0.027   14.7   0.8         65    4.2   0.0    4.7  4  HEAT          HEAT repeat
       0.13   12.8   0.4         61    4.3   0.0    4.0  4  HEAT_EZ       HEAT-like repeat


Domain annotation for each model (and alignments):
>> Nipped-B_C  Sister chromatid cohesion C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.6   5.9e+03      81     110 ..     467     508 ..     445     583 .. 0.59
   2 ?   -3.0   0.2       1.7     6e+03     112     153 ..     814     858 ..     784     868 .. 0.60
   3 ?   -3.3   0.0         2   7.2e+03       7      22 ..     971     986 ..     970    1000 .. 0.79
   4 ?   -2.2   0.0      0.96   3.4e+03      16      71 ..    1061    1118 ..    1054    1206 .. 0.71
   5 !  140.4   1.1   1.8e-44   6.4e-41       3     189 ..    1489    1688 ..    1487    1689 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.6
                 HTHHHHHHHHHHHHHH...H-TTTG.................... CS
  Nipped-B_C  81 skalqgirlafqlqkkiasssgaklrrsa...............s 110
                 ++a  +ir+a+   + ++   g++ +r++                
  KHJ30814.1 467 TSAQLSIRSAYTALRIMS---GSREERQIysedltksalcafsyV 508
                 566667888888877733...333333333223333333333330 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.7
                 .GG---HHHHHHHHH--SHHHHHHHHHHHHHHH.H...HTSSTT- CS
  Nipped-B_C 112 tesptallsslysllrsnkqsrrkflsslvklfdf...esesdae 153
                   + + l+ + +++++s   +++++ ++l kl++    ++esda+
  KHJ30814.1 814 GPKISELNFQAQKMVKSVEYYQNELGNNLAKLMELffeKKESDAQ 858
                 445556666677777888888888888888877545543333333 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 2
                 HHHHHHHHHHTSS-HH CS
  Nipped-B_C   7 rYlkdilecalspdsq 22 
                 +Yl++il +++++ ++
  KHJ30814.1 971 QYLDHILSIFFTSMNS 986
                 69******99887654 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 0.96
                  HTSS-HHHHHHHHHHHHHHHHHT-S-GGG..THHHHHHHTT-SSHHHHHHHHHHHHHH CS
  Nipped-B_C   16 alspdsqvrlaAlevvslilrqGLvhPvq..cvptLialetdpdesirsrAdkllqel 71  
                    + +  vr  A+++ + i    L h v   + +tL   ++d+++si+++A ++l+++
  KHJ30814.1 1061 LSDANVGVRKRAIKLSKDIYIRNLKHHVRvrIAKTLLWKTADDEPSIQELARQTLEDI 1118
                  5555555555555555555555555554322566666667777777777777777766 PP

  == domain 5  score: 140.4 bits;  conditional E-value: 1.8e-44
                  HHHHHHHHHHHH.HHTSS-HHHHHHHHHHHHHHHHHT-S-GGGTHHHHHHHTT-SSHHHHHHHHHHHHHHHHHSHHHHHHTHHHHHHHHHHHHHH.. CS
  Nipped-B_C    3 avvqrYlkdile.calspdsqvrlaAlevvslilrqGLvhPvqcvptLialetdpdesirsrAdkllqeleekyegfleskalqgirlafqlqkkia 98  
                  +++qr+l++i+  +  s ++++ l++ e++++++rqGLvhP+q   +Li let p  +++++A++ +  l+ k+e+++e+ ++ ++++++++q++i+
  KHJ30814.1 1489 SIAQRFLQRIIFvSLSSREEKLTLLSTEIIASVARQGLVHPKQPGVALIILETAPFMKVAKIAYDEHIALHAKHETLFERDYMTAVQSSYDYQRDIV 1585
                  89*********9555568999**************************************************************************** PP

                  ..H-TTTG........GG---HHHHHHHHH..--SHHHHHHHHHHHHHHH.H........HTSSTT--HHHHHHHHHHHHHHHHCS--EEHHHHHHH CS
  Nipped-B_C   99 .sssgaklrrsa.setesptallsslysll..rsnkqsrrkflsslvklfdf........esesdaesekshlsfllfladnLahfpYqtqdEvlyv 183 
                   +++ga  ++++  + +s  ++ls+++++l   s+ ++r+kf+++++ ++d+        e++ +++++++h+ f  +l++n+a+f+Y+t dE++ +
  KHJ30814.1 1586 nDTRGAWISNDNeISGTSYVSKLSRMIQVLndFSKPKTRKKFFENICLQLDKnkprkdasEKHLTSREDEDHMRFSQYLVENIAFFDYKTFDELISI 1682
                  *****999877767889999999*******777999**************98999999997888999****************************** PP

                  HHHH.. CS
  Nipped-B_C  184 ihhidr 189 
                  ih i++
  KHJ30814.1 1683 IHVIEK 1688
                  ****97 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.1    0.0009       3.2      30      81 ..     984    1038 ..     961    1043 .. 0.63
   2 !   16.4   0.0     2e-06     0.007      24      81 ..    1018    1075 ..    1007    1080 .. 0.89
   3 !   13.5   0.1   1.6e-05     0.057      21      97 ..    1052    1131 ..    1047    1192 .. 0.82
   4 ?   -1.1   0.2      0.48   1.7e+03      94     125 ..    1255    1286 ..    1242    1349 .. 0.55

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0009
        Cnd1   30 LkDedpyVRktaaivvakL..ilndmvkekg.flselaklleDenprVvanalaa 81  
                  ++  +++V+   + ++++L   ++ +++    + +++   leD +++V++nal +
  KHJ30814.1  984 MNSGQAMVQAKSLKCLTQLldTDPSIIERHPwVKDQMVARLEDISSSVRENALGL 1038
                  5556667777777777777333333555555666777777777777777777644 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 2e-06
        Cnd1   24 epLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaa 81  
                  +++ +rL+D ++ VR++a+ +v+kLi      e +++ e++k l+D n  V++ a+ +
  KHJ30814.1 1018 DQMVARLEDISSSVRENALGLVSKLIFLRPSLEIEMVPEVLKRLSDANVGVRKRAIKL 1075
                  67999********************88888888999***************9998765 PP

  == domain 3  score: 13.5 bits;  conditional E-value: 1.6e-05
        Cnd1   21 ylvepLrkrLkDedpyVRktaaivvakL.ilndmvkekg.flselaklleDenprVvanalaalteisek.senaiynll 97  
                  ++v+++ krL+D +  VRk a+ +   + i+n    ++  + ++l+    D++p+++++a+  l++i+     + + n+ 
  KHJ30814.1 1052 EMVPEVLKRLSDANVGVRKRAIKLSKDIyIRNLKHHVRVrIAKTLLWKTADDEPSIQELARQTLEDIWLSpLHQSAANND 1131
                  5788999****************99999655555555555788899999*******************986334444444 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 0.48
        Cnd1   94 ynllpdiisklsdalnecsewgqitilefLls 125 
                  yn++ +i+++ + +l  ++e+  iti + Ll+
  KHJ30814.1 1255 YNSVVNIFKQTLPHLSGIQENLLITIRNDLLK 1286
                  44444444444444444444444444333332 PP

>> Cohesin_HEAT  HEAT repeat associated with sister chromatid cohesion
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       2.1   7.4e+03       7      25 ..     554     572 ..     550     574 .. 0.80
   2 !   16.9   0.1   1.7e-06    0.0059       1      39 [.     997    1036 ..     997    1039 .. 0.91
   3 ?    2.0   0.1     0.076   2.7e+02      18      41 ..    1052    1075 ..    1037    1075 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2.1
                   HHH-GGGGGSHHHHHHHHH CS
  Cohesin_HEAT   7 vekdpsiLsapevldtiar 25 
                   ++  p++  a++v++++++
    KHJ30814.1 554 ATLVPQVDLADSVMNALES 572
                   555689999*******987 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 1.7e-06
                    HHHHHHHHH-GGGGGSH.HHHHHHHHHHHSS-HHHHHHHH CS
  Cohesin_HEAT    1 kalsslvekdpsiLsap.evldtiarrltDsspsVRdAaL 39  
                    k+l++l++ dpsi  +   v+d+  +rl+D s+sVR+ aL
    KHJ30814.1  997 KCLTQLLDTDPSIIERHpWVKDQMVARLEDISSSVRENAL 1036
                    9*************76549*****************9777 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.076
                    HHHHHHHHHHHSS-HHHHHHHHHH CS
  Cohesin_HEAT   18 evldtiarrltDsspsVRdAaLel 41  
                    e+   + +rl+D  + VR+ a++l
    KHJ30814.1 1052 EMVPEVLKRLSDANVGVRKRAIKL 1075
                    66677999**********988776 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.025        90       1      28 [.     976    1003 ..     976    1005 .. 0.92
   2 ?   -0.8   0.0       0.7   2.5e+03      13      27 ..    1028    1042 ..    1019    1044 .. 0.76
   3 ?    4.2   0.0     0.018        65       2      22 ..    1054    1074 ..    1053    1079 .. 0.91
   4 ?    0.0   0.0       0.4   1.4e+03      16      28 ..    1399    1411 ..    1397    1413 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.025
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgala 28  
                  +l ++ + +++  + V + ++k+L++l+
  KHJ30814.1  976 ILSIFFTSMNSGQAMVQAKSLKCLTQLL 1003
                  788999999*****************97 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.7
                  SHHHHHHHHHHHHHH CS
        HEAT   13 speVReaAakaLgal 27  
                  s++VRe+A+  + +l
  KHJ30814.1 1028 SSSVRENALGLVSKL 1042
                  789*****9877766 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.018
                  HHHHHHHHT-SSHHHHHHHHH CS
        HEAT    2 lPlllkllsDpspeVReaAak 22  
                  +P +lk lsD +  VR+ A+k
  KHJ30814.1 1054 VPEVLKRLSDANVGVRKRAIK 1074
                  7999*************9987 PP

  == domain 4  score: 0.0 bits;  conditional E-value: 0.4
                  HHHHHHHHHHHHH CS
        HEAT   16 VReaAakaLgala 28  
                   R++A++aLg ++
  KHJ30814.1 1399 LRKSALQALGYVC 1411
                  6********9776 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.1     4e+03      33      55 .]     980    1002 ..     971    1002 .. 0.78
   2 ?    4.3   0.0     0.017        61      27      55 .]    1014    1042 ..    1005    1042 .. 0.88
   3 ?    2.5   0.0     0.061   2.2e+02       2      40 ..    1030    1063 ..    1029    1073 .. 0.79
   4 ?    2.9   0.0     0.046   1.7e+02      23      54 ..    1380    1409 ..    1374    1410 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.1
     HEAT_EZ   33 LlalLnddsdeVRaaAagaLgnl 55  
                  +   +n+ +++V+a+++ +L++l
  KHJ30814.1  980 FFTSMNSGQAMVQAKSLKCLTQL 1002
                  5556788888**********997 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.017
     HEAT_EZ   27 peilpaLlalLnddsdeVRaaAagaLgnl 55  
                  p++ ++++a+L+d s++VR++A+g  ++l
  KHJ30814.1 1014 PWVKDQMVARLEDISSSVRENALGLVSKL 1042
                  6777899*****************98876 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.061
     HEAT_EZ    2 rvRraAawaLGrlaggepellqplvpeilpaLlalLndd 40  
                   vR++A+  ++ l + +p l   +vpe+l+ L      d
  KHJ30814.1 1030 SVRENALGLVSKLIFLRPSLEIEMVPEVLKRLS-----D 1063
                  5899999999889999******88888888886.....4 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.046
     HEAT_EZ   23 qplvpeilpaLlalLnddsd...eVRaaAagaLgn 54  
                  + l+++i+++L+     +++   e R+ A+ aLg 
  KHJ30814.1 1380 SRLITDIIAPLA-----SKSyplELRKSALQALGY 1409
                  668999******.....66654377********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1881 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       730  (0.0407162); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.01u 0.28s 00:00:01.29 Elapsed: 00:00:00.46
# Mc/sec: 12358.16
//
Query:       KHJ30815.1  [L=796]
Description: putative atp-dependent rna helicase suv3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-18   66.4   0.2    3.9e-18   65.1   0.2    1.7  1  SUV3_C      Mitochondrial degradasome RNA helicase subunit C 
    2.6e-14   52.8   0.4      1e-13   50.9   0.3    2.0  2  Suv3_C_1    Suv3 C-terminal domain 1
    5.6e-10   39.5   0.2    2.1e-09   37.7   0.0    2.0  2  Helicase_C  Helicase conserved C-terminal domain


Domain annotation for each model (and alignments):
>> SUV3_C  Mitochondrial degradasome RNA helicase subunit C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.1   0.2   6.5e-22   3.9e-18       1      47 [.     683     729 ..     683     730 .. 0.97

  Alignments for each domain:
  == domain 1  score: 65.1 bits;  conditional E-value: 6.5e-22
                 -HHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH CS
      SUV3_C   1 LerLEslhkvldLYlWLSyRfpevFpdrelaeelkkeveekIeeaLe 47 
                 L+++Eslhk l+LYlWLSyRf +vF++++la+++k ++e kI+e+L+
  KHJ30815.1 683 LREAESLHKALTLYLWLSYRFAGVFTSQALAFHIKGLLEVKIDECLA 729
                 7899******************************************7 PP

>> Suv3_C_1  Suv3 C-terminal domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.48   2.9e+03       9      21 ..     174     187 ..     172     188 .. 0.80
   2 !   50.9   0.3   1.7e-17     1e-13       1      43 []     608     650 ..     608     650 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.48
    Suv3_C_1   9 ip.LSlrdRytFcm 21 
                 i+ L+l+++++F  
  KHJ30815.1 174 IKaLNLQVKFSFLS 187
                 65599*******86 PP

  == domain 2  score: 50.9 bits;  conditional E-value: 1.7e-17
    Suv3_C_1   1 elAelIqpipLSlrdRytFcmAPvntrdpkavaaLvkfArqya 43 
                 ++A+ Iqp +LS rdR+tF  AP++t+dp++v++++++A+++a
  KHJ30815.1 608 AIADIIQPYDLSSRDRLTFTAAPISTHDPSMVSIIKELASCIA 650
                 59***************************************97 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0         1   6.2e+03      40      63 ..      23      46 ..       9      51 .. 0.78
   2 !   37.7   0.0   3.5e-13   2.1e-09      12     110 ..     385     492 ..     375     493 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1
                TSTEEEESTTSTHHHHHHHHHHHH CS
  Helicase_C 40 gikvavlhgelpqnereeileqfn 63
                +  ++ l+ +  q++ +++l++f+
  KHJ30815.1 23 SRPFTFLNRNSGQKDSQKTLSNFR 46
                456778888999999999999998 PP

  == domain 2  score: 37.7 bits;  conditional E-value: 3.5e-13
                 HTTTTSEEEEEESSHH.HHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH..TTSSSEEEESGGGTSSSTSTTESEEEESSSS.........SSHH CS
  Helicase_C  12 leeeggkilifvntid.rlekvklllekkgikvavlhgelpqnereeileqfn..kgesdvLiatdvaerGidipkvnlVinfdlp.........rnvt 98 
                 + ++g+ +++f++     ++  + +++  g ++a+++g+lp + r +  + fn  ++++d+L+a+d++++G+++  ++ +i+   +          +++
  KHJ30815.1 385 NLRKGDAVILFSRLAIhGMK--QEIERVTGKRCAIVYGSLPPEIRAQQAALFNdpNNDYDFLVASDAVGMGLNLS-IRRIIFETTQkfdgnerrvMETS 480
                 44566667777776554443..55544559***********************9889*****************5.7777755555566555444447* PP

                 HHHHHHTTSSST CS
  Helicase_C  99 syiqriGRtgRa 110
                 +++q +GR+gR+
  KHJ30815.1 481 EIKQIAGRAGRY 492
                 ***********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (796 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       613  (0.0341904); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.26s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 5477.30
//
Query:       KHJ30816.1  [L=133]
Description: hypothetical protein EV44_g3211 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.03   14.6   0.0       0.06   13.6   0.0    1.4  1  OKR_DC_1_N     Orn/Lys/Arg decarboxylase, N-terminal domain
      0.075   12.3   0.1       0.17   11.1   0.0    1.5  2  Hydrolase_4    Serine aminopeptidase, S33
      0.077   13.2   5.2      0.096   12.9   5.2    1.1  1  Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
      0.098   13.2   3.0         10    6.7   0.0    2.6  3  ANAPC2         Anaphase promoting complex (APC) subunit 2
       0.13   12.4   1.0        0.2   11.8   1.0    1.4  1  RhoGEF67_u2    Unstructured region two on RhoGEF 6 and 7


Domain annotation for each model (and alignments):
>> OKR_DC_1_N  Orn/Lys/Arg decarboxylase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.7e-05      0.06       5      57 ..      74     125 ..      71     127 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.7e-05
  OKR_DC_1_N   5 airelaealekegfevvgvtstdDllsvieqnsriaavvlsvddeaaelldei 57 
                 ++++l++++e+ +f+vv+++s + l++++ ++  i+++v +++ +   +++++
  KHJ30816.1  74 RFDHLIKEIEQWDFKVVQIDSES-LEQFLGKFVEIGSIVHKLSPDDLTIIANM 125
                 6789*******************.***************99998888888776 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1      0.57     2e+03     142     164 ..       8      30 ..       4      35 .. 0.77
   2 ?   11.1   0.0   4.8e-05      0.17      12      38 ..      67      93 ..      63      95 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.57
  Hydrolase_4 142 nlkadslsrdpevvaayeadplv 164
                  ++++++l++++++ ++ ++d  v
   KHJ30816.1   8 ETLKKFLTKKKKEKKKKKNDTEV 30 
                  67788889999999988888766 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 4.8e-05
  Hydrolase_4 12 GlaehsgryaelaeaLaaqGfavyalD 38
                 G ++h+ r+++l+++  + +f+v+ +D
   KHJ30816.1 67 GTNDHIVRFDHLIKEIEQWDFKVVQID 93
                 99**********************999 PP

>> Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   5.2   2.7e-05     0.096      57     131 ..       8      84 ..       3     106 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.7e-05
  Jnk-SapK_ap_N  57 eeleqLeteyerekelrkrae...eeleeiedqweeerkelqekveqleeenrelelkaknaadqlsrleekeaelkk 131
                    e+l+++ t++++ek+++k+     e++eeie q  +e+ + ++ v++ e e+ e +l++  ++d++ r  +  +e ++
     KHJ30816.1   8 ETLKKFLTKKKKEKKKKKNDTevpETFEEIEVQQSDEN-ATESNVSDGEVEVAENKLRSTGTNDHIVRFDHLIKEIEQ 84 
                    45555556555555555555458899999998877665.99***************************9887666655 PP

>> ANAPC2  Anaphase promoting complex (APC) subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.3    0.0038        14      33      50 ..       5      22 ..       2      27 .. 0.90
   2 ?   -2.6   0.0       2.2     8e+03      46      56 ..      51      61 ..      48      64 .. 0.71
   3 ?    6.7   0.0    0.0028        10      31      52 ..      90     111 ..      84     114 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0038
      ANAPC2 33 isdeeLkefLdelvkegk 50
                ++ e+Lk+fL+++ ke+k
  KHJ30816.1  5 YTTETLKKFLTKKKKEKK 22
                6899***********987 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.2
      ANAPC2 46 vkegkLelsgG 56
                v++g++e++++
  KHJ30816.1 51 VSDGEVEVAEN 61
                78888887665 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0028
      ANAPC2  31 ydisdeeLkefLdelvkegkLe 52 
                 ++i++e L++fL++ v+ g ++
  KHJ30816.1  90 VQIDSESLEQFLGKFVEIGSIV 111
                 57999***********998876 PP

>> RhoGEF67_u2  Unstructured region two on RhoGEF 6 and 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.0   5.5e-05       0.2      53      77 ..       6      30 ..       2      51 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.5e-05
  RhoGEF67_u2 53 spktvkkflpkrkterkpsdeefal 77
                 +  t+kkfl k+k+e+k+ ++++ +
   KHJ30816.1  6 TTETLKKFLTKKKKEKKKKKNDTEV 30
                 6789*************99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2235  (0.124658); expected 358.6 (0.02)
Passed bias filter:                      835  (0.0465726); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 962.20
//
Query:       KHJ30817.1  [L=175]
Description: putative cytochrome oxidase assembly [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-30  104.9   0.0    2.7e-30  104.5   0.0    1.1  1  Coa1      Cytochrome oxidase complex assembly protein 1


Domain annotation for each model (and alignments):
>> Coa1  Cytochrome oxidase complex assembly protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.5   0.0   1.5e-34   2.7e-30      28     117 .]      57     146 ..      49     146 .. 0.97

  Alignments for each domain:
  == domain 1  score: 104.5 bits;  conditional E-value: 1.5e-34
        Coa1  28 ivrsvlyqlrrspevrelLGeeipfkssipwisGelntvkGkidlsfpvkGskgeGtvyltaeResktepfeilefsvevddgkkidLld 117
                 +v s++y+lr+sp++re+LG+ei+ +++ipwi+Ge+n ++Gkid+ f vkG+k+ +t+++t++R++++  fe++e+s+++++g+k dLl+
  KHJ30817.1  57 PVASTMYALRTSPKAREILGDEIYYAAKIPWIWGEINLLQGKIDIHFTVKGTKQHATMRFTSVRPTRMGLFETSEWSLTIENGDKFDLLE 146
                 5789***********************************************************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       191  (0.0106531); expected 358.6 (0.02)
Passed bias filter:                      183  (0.0102069); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 1324.79
//
Query:       KHJ30818.1  [L=212]
Description: putative coiled-coil domain-containing protein 25 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-41  141.6   0.2    2.9e-41  140.5   0.2    1.5  1  NFACT-R_1  NFACT protein RNA binding domain
  ------ inclusion threshold ------
      0.033   14.4   0.6       0.12   12.6   0.0    2.1  2  NFACT-R_2  NFACT protein RNA binding domain
       0.13   12.0   0.9         12    5.6   0.5    2.4  2  TBCC       Tubulin binding cofactor C


Domain annotation for each model (and alignments):
>> NFACT-R_1  NFACT protein RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.5   0.2   4.8e-45   2.9e-41       1     109 []       1     112 [.       1     112 [. 0.97

  Alignments for each domain:
  == domain 1  score: 140.5 bits;  conditional E-value: 4.8e-45
   NFACT-R_1   1 kvfwFk...ssdgylvimGkDkqeneelikkyleesdvwfhvdkessahvylrlsege.leeipeelleeaaqlakanSiagnklssvdvvyvpasnls 95 
                 +v++F+    + +  ++mGkDk+ene lik++le+ dvwfhvdk ssahvy+rl+eg+ ++++peel++++aql+kanSi+gnk+++++v+y+p+ nl+
  KHJ30818.1   1 MVYYFTsnlVEPQAQLYMGKDKEENEVLIKYGLEK-DVWFHVDKLSSAHVYVRLQEGQkWDSLPEELVNDCAQLTKANSIEGNKKDNITVIYTPWANLK 98 
                 9*****7766777**********************.********************999**************************************** PP

   NFACT-R_1  96 ktapldtGsvgfkg 109
                 k++++ +G+vgfk+
  KHJ30818.1  99 KDGSMVAGQVGFKD 112
                 ************96 PP

>> NFACT-R_2  NFACT protein RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0     2e-05      0.12       7      66 ..      11      77 ..       9     105 .. 0.71
   2 ?   -0.5   0.4      0.24   1.4e+03      47      47 ..     155     155 ..     113     197 .. 0.55

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2e-05
   NFACT-R_2  7 sekaklIvgReeeEnkflkgll.kkdfvslrakshkGplvlid.......gelseedlelaarivarY 66
                +++a+l +g+++eEn+ l ++  +kd++ +++ + +++ v ++       ++l ee ++ +a+++   
  KHJ30818.1 11 EPQAQLYMGKDKEENEVLIKYGlEKDVW-FHVDKLSSAHVYVRlqegqkwDSLPEELVNDCAQLTKAN 77
                7889999*********************.*****9999887743443322233455555566665555 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.24
   NFACT-R_2  47 i 47 
                  
  KHJ30818.1 155 R 155
                 2 PP

>> TBCC  Tubulin binding cofactor C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0    0.0044        26      54     110 ..     103     160 ..     101     169 .. 0.81
   2 ?    5.6   0.5    0.0021        12      91     120 .]     184     211 ..     167     211 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0044
                 ---SEEEEES-BS-E.EE---SSEEEEES-BSEEEE------TTSHHHHHHHT--SS- CS
        TBCC  54 vacrqlrihdctnvd.vylltksrPiiedskgirfapynlsypeleehlkkagldpen 110
                 +++ q+  +d+++v+ + ++ + ++ii + ++ ++ +++    e e+ +k+++ + + 
  KHJ30818.1 103 MVAGQVGFKDSRQVKkILIAQRENAIINRLNKTKVEKFPDLQLEKENFMKAVRKKEQA 160
                 788999999***997366677779**************99999998888887666544 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0021
                 ----TTSHHHHHHHT--SS---.-S-EE-- CS
        TBCC  91 nlsypeleehlkkagldpennnlwsevddf 120
                 + +y+el ++++++g++ +nn+ w++  df
  KHJ30818.1 184 EHAYDELFKDMENQGINNQNNEDWED--DF 211
                 56899*******************98..66 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2756  (0.153717); expected 358.6 (0.02)
Passed bias filter:                      651  (0.0363099); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 1465.13
//
Query:       KHJ30819.1  [L=251]
Description: putative kinetochore protein spc25 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-24   86.2   1.5    1.3e-24   86.2   1.5    2.2  2  Spindle_Spc25  Chromosome segregation protein Spc25
     0.0019   17.9  12.4     0.0033   17.1  12.4    1.3  1  Filament       Intermediate filament protein
  ------ inclusion threshold ------
      0.037   14.3   1.1        8.8    6.7   0.1    2.8  2  Mac            Maltose acetyltransferase
      0.088   12.8   0.6       0.41   10.7   0.0    2.1  2  RHD_dimer      Rel homology dimerisation domain
       0.16   12.2   9.9         17    5.6   0.0    2.3  2  Med21          Subunit 21 of Mediator complex


Domain annotation for each model (and alignments):
>> Spindle_Spc25  Chromosome segregation protein Spc25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.38   1.4e+03      34      69 ..      16      51 ..       8      54 .. 0.60
   2 !   86.2   1.5   3.6e-28   1.3e-24       2      73 .]     175     246 ..     174     246 .. 0.98

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.38
  Spindle_Spc25 34 yevlecsPkLedeeleelleeLn.etndlgkFlkevR 69
                    +++++ P ++  e++el +++   t  + +F+ + R
     KHJ30819.1 16 LSLIDSLPGINF-EFDELRNRMAkFTIKFNNFIEQGR 51
                   566666666663.567776666644666666666555 PP

  == domain 2  score: 86.2 bits;  conditional E-value: 3.6e-28
  Spindle_Spc25   2 ieedklkfvFtnidpkdperefsftLdvsedtyevlecsPkLedeeleelleeLnetndlgkFlkevRkaFk 73 
                    +++d+l f+Ft++d++d++re+sf+Ld+s+++y ++ c+P+L++ +++++l++Lne++dl+ +lk +R++F+
     KHJ30819.1 175 NQNDRLNFTFTHVDDQDWTREASFELDFSKRDYIITCCKPNLKKIDVDKVLDKLNECRDLRVLLKGMRELFV 246
                    689********************************************************************6 PP

>> Filament  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1  12.4   9.2e-07    0.0033     143     271 ..      28     153 ..      25     159 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 9.2e-07
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 143 EvkelqkqvseqvlvevdaarkldLteilkeiraqyeelaeknreeaeewykskleelqeaaeknsealrsakeeitelrrqiqsleieleslkkqkas 241
                 E +el++++ ++ ++  ++  ++   +il e r+q+   +++ +e+ +++ k+ +e l ++++++++ + +   e +e++  i sl+++ +++ ++k++
  KHJ30819.1  28 EFDELRNRM-AKFTIKFNNFIEQGRRQILDE-RNQFRLTIAELKED-QRMKKRDIEILAQKSNTHEKIMAKEAAETEEMKSAISSLTAQRDAQLATKET 123
                 778889998.889999999999999999988.99999999887776.5667999********************************************* PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 242 leaqlaeleerleaeleklqeklseleeel 271
                 l +q++e++++++ +l+  ++  ++l+e+ 
  KHJ30819.1 124 LLHQITEVQKQVDDKLAAQRAHARHLDEQA 153
                 **************************9985 PP

>> Mac  Maltose acetyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.1    0.0025       8.8      15      47 ..      28      57 ..      22      61 .. 0.85
   2 ?    5.4   0.1    0.0062        22      13      31 ..     136     156 ..     133     171 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0025
                HHHHHHHHHHHHHHHHHTSTTT-HHHHHHHHHH CS
         Mac 15 eLvaeRlrarelcrryNqtrpsdkdeRrelLre 47
                e  ++R r  +++ ++N++    ++ Rr++L e
  KHJ30819.1 28 EFDELRNRMAKFTIKFNNF---IEQGRRQILDE 57
                78899************86...67778888876 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0062
                 SHHHHHHHHHHHHH..HHHHH CS
         Mac  13 DpeLvaeRlrarel..crryN 31 
                 D++L+a+R +ar+l  ++r+N
  KHJ30819.1 136 DDKLAAQRAHARHLdeQARFN 156
                 689*********983335666 PP

>> RHD_dimer  Rel homology dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.2      0.28   9.9e+02      24      51 ..      73     101 ..      71     157 .. 0.66
   2 ?   10.7   0.0   0.00011      0.41      32      75 ..     180     223 ..     166     227 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.28
   RHD_dimer  24 kvqkddikvrFleeee.gkevWeaeaefs 51 
                 +++k di++  +++++ +k + +++ae +
  KHJ30819.1  73 RMKKRDIEILAQKSNThEKIMAKEAAETE 101
                 56777888877777764444444444433 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00011
   RHD_dimer  32 vrFleeeegkevWeaeaefskedvhkqvaivfktPpYrdqeite 75 
                   F+ ++ +++ W+ ea+f+ + +++ + i+++ P+ ++ ++++
  KHJ30819.1 180 LNFTFTHVDDQDWTREASFELDFSKRDYIITCCKPNLKKIDVDK 223
                 556666667899************************99999875 PP

>> Med21  Subunit 21 of Mediator complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0048        17      89     111 ..      18      40 ..      15      57 .. 0.79
   2 ?    4.1  10.7     0.014        52      62     143 ..      55     136 ..      44     137 .. 0.94

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0048
       Med21  89 LIssLPgigsseeeqeerikeLe 111
                 LI+sLPgi+ + +e  +r+++  
  KHJ30819.1  18 LIDSLPGINFEFDELRNRMAKFT 40 
                 9*********9999999998765 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.014
       Med21  62 pdspeefaatqrelardlilkeqqIeyLIssLPgigsseeeqeerikeLeeelreveeereekvkekeellkkveellrava 143
                  d++++f+ t+ el +d  +k+++Ie L ++  + +   ++  ++ +e+++ +    ++r +++  ke+ll ++ e+ ++v 
  KHJ30819.1  55 LDERNQFRLTIAELKEDQRMKKRDIEILAQKSNTHEKIMAKEAAETEEMKSAISSLTAQRDAQLATKETLLHQITEVQKQVD 136
                 58899************************************************************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2288  (0.127614); expected 358.6 (0.02)
Passed bias filter:                      724  (0.0403815); expected 358.6 (0.02)
Passed Vit filter:                        81  (0.00451782); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 1812.91
//
Query:       KHJ30820.1  [L=307]
Description: putative 50s ribosomal protein l3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-12   46.8   2.2      1e-09   37.8   2.2    2.2  1  Ribosomal_L3  Ribosomal protein L3


Domain annotation for each model (and alignments):
>> Ribosomal_L3  Ribosomal protein L3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   2.2   5.9e-14     1e-09     210     290 ..     177     261 ..     170     300 .. 0.91

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 5.9e-14
                   CCS-TTSEEEEEEEE---EEE-HHHHCT----STTTSSS..SSS-S-SS-..SSSSS--TTS--SEEESCCEEEEEEEEEEEEET CS
  Ribosomal_L3 210 avFrqgeliDvigvtkGkGfeGvvkRWgvkklprkthrg..lRkvaaiga..wdparVsstvaraGqkGyhhRtelnkkiyrigk 290
                   + F +g+++D  +  +G GfeG +kR  + ++p+ ++ +  +R +++ ga  +  +rV ++ +++G++G  + t  n k+ + ++
    KHJ30820.1 177 DWFLEGQFVDTRSNCRGMGFEGGMKRHNFSGQPASHGNSktHRAMGSAGAsqGSGSRVLPGKRMPGRMGGNQVTIQNVKVLKTDT 261
                   56999*******************************87666******998335678************************99877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       267  (0.0148921); expected 358.6 (0.02)
Passed bias filter:                      234  (0.0130515); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2239.63
//
Query:       KHJ30821.1  [L=200]
Description: hypothetical protein EV44_g5086 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       702  (0.0391544); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1555.56
//
Query:       KHJ30822.1  [L=224]
Description: putative 60s ribosomal protein l3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-45  155.0   0.1      2e-45  154.7   0.1    1.1  1  PITH      PITH domain


Domain annotation for each model (and alignments):
>> PITH  PITH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.7   0.1   1.1e-49     2e-45       1     152 []      36     181 ..      36     181 .. 0.93

  Alignments for each domain:
  == domain 1  score: 154.7 bits;  conditional E-value: 1.1e-49
        PITH   1 LyqyIdlkkveclNeseegsvkkvlkksweerldekkyleSdaDeqLlihipFtqsvklksllikstkkeeeesaPktiklfkNrkkkldFdda.s.ep 97 
                 LyqyI++++v+clNe+  gs+++++kk+w+erl+  ++l Sd+DeqLl+hipFt+++kl+s+li+s++   + saP+t+k+f Nr+  ldF++a + +p
  KHJ30822.1  36 LYQYINFDNVTCLNETVAGSGQAIVKKPWAERLQLFPVLVSDTDEQLLMHIPFTGQIKLHSILIRSSN---NGSAPQTLKVFQNRD-DLDFSTAcElSP 130
                 8********************************77779**************************9976...89***********85.55*****8777* PP

        PITH  98 tqeielseedeeketvelplrfvkfqnvssLtlffednnegedvtridyiglkGe 152
                 +qe+++    +++e++++p++ + f +v++Ltlf+ed n+g+d+t+i+y+g+kG+
  KHJ30822.1 131 VQEFKIP---QSSEVQDIPVKRALFGKVQNLTLFVED-NYGDDNTKITYLGFKGD 181
                 *****97...335688********************9.66799**********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       250  (0.0139439); expected 358.6 (0.02)
Passed bias filter:                      220  (0.0122706); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.21s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1719.39
//
Query:       KHJ30823.1  [L=314]
Description: hypothetical protein EV44_g5976 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       937  (0.0522617); expected 358.6 (0.02)
Passed bias filter:                      612  (0.0341346); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2343.37
//
Query:       KHJ30824.1  [L=666]
Description: putative chromatin remodeling complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-19   69.9   0.0    1.7e-17   63.2   0.0    2.6  3  Actin     Actin


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.2   0.0   9.2e-22   1.7e-17      64     194 ..      92     219 ..      30     235 .. 0.86
   2 !    3.9   0.0   0.00095        17     299     348 ..     449     499 ..     313     514 .. 0.84
   3 ?   -2.3   0.0     0.071   1.3e+03     386     404 ..     643     661 ..     636     662 .. 0.86

  Alignments for each domain:
  == domain 1  score: 63.2 bits;  conditional E-value: 9.2e-22
       Actin  64 pvedGvvedwdaveelwehvlkeelkvdpeehpllltepplnppkqrekalEivfEkfkvpalylaksavlsafasgkstglvvDsGasvtsvvpVldG 162
                 p+++G +e+  a+ +l++h+    +   + ++p+l++ +p  ++k+ e +++ vfEkfk+p+l++ +sa+ +++a+g +++ v+D+G ++t ++++ld 
  KHJ30824.1  92 PLKEGRIENLPAFLALLQHIHST-F-SPTLHTPILIVSQPSWTAKNHEDITQFVFEKFKTPGLCIIDSAIATSYAYGVANATVIDVGFEKTDITAILD- 187
                 8899*************998655.3.445678999999999999*****************************************************9. PP

       Actin 163 yvLkkairrsdlgGkaLteqlkellssknvev 194
                 +v++   +  + gG+ +t+ l ell+sk+++ 
  KHJ30824.1 188 FVISARGTVTESGGEGMTRRLVELLKSKDFTR 219
                 777777778899***************85544 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.00095
       Actin 299 kskllgiselivaaina.cdvdlrpeLlanivvtGGnsllpglteRlekel 348
                 k  +  i++ ++++i   +d+  r+e  ++ +++G+ s ++g++e l   l
  KHJ30824.1 449 KGYMDAIADTVYRTILSiSDISKRQEAWESLIICGSGSKVRGFKEALLGTL 499
                 55677899999999876268999*********************9876555 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.071
       Actin 386 qlwvskqEYeEqGssvver 404
                 +  +s+ E++E G+ ++++
  KHJ30824.1 643 KAFLSRMEFNEDGPTAIHQ 661
                 6679**********99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (666 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       908  (0.0506442); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.41
# Mc/sec: 4905.60
//
Query:       KHJ30825.1  [L=162]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       785  (0.0437838); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.36
# Mc/sec: 1360.31
//
Query:       KHJ30826.1  [L=517]
Description: putative dynein light intermediate chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.1e-39  133.6   0.6    2.9e-35  122.0   0.0    3.0  3  DLIC      Dynein light intermediate chain (DLIC)


Domain annotation for each model (and alignments):
>> DLIC  Dynein light intermediate chain (DLIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.0   0.0   1.6e-39   2.9e-35       3     329 ..      23     354 ..      21     373 .. 0.79
   2 !    7.9   0.0   6.8e-05       1.2     321     356 ..     386     423 ..     363     442 .. 0.75
   3 ?   -0.3   0.0      0.02   3.6e+02     384     413 ..     482     511 ..     471     514 .. 0.84

  Alignments for each domain:
  == domain 1  score: 122.0 bits;  conditional E-value: 1.6e-39
        DLIC   3 gqnlwsailsevstrsssklPsgksvlvlGedgsGkttliaklqGvee.....ekkGr........Gleylyldvkdedrdd.ltrlnvwil.dGdlyh 86 
                 ++++ws++l+ vs+     lP +k +++lG  +  +  ++ +l   +      ++k +         l y y dv d d +d l+rl++++l d  +  
  KHJ30826.1  23 KKDIWSSLLNSVSS--GKSLP-EKIIIMLGGTSEMQNEFLQRLSADDSktsqsSQKNKnppnanhlALGYTYNDVLDADHEDaLARLSIFLLsDPSPSF 118
                 67899999999974..33466.68999999999988888888854332111112222212222223699********98766369*****9967899** PP

        DLIC  87 kgllkfaleaeslkdtlvilvvdlsrPwtileslqkwasvlrehidklkiepeekreleqrlvkefqeyvepeedlpgsPqrrtprlssvdedsvllPl 185
                   llk  l+ +++ +tlv++ +d s+Pw +  +l+ w+++lr  + +l  +   k+++e  ++ ++++   + ++++g        ls+  +d   lPl
  KHJ30826.1 119 APLLKPLLTPKTIPNTLVVILLDWSQPWLWPRQLRAWIQLLRSLLISLDENC--KEKME-EVMISWRDKGRSLKNIDGLSA---GILSE--ND-LNLPL 208
                 ******************************************9997775433..33444.455678887777777777543...33333..33.67*** PP

        DLIC 186 gedvlttnlGldvvvvvtkcdaisvlekehdyrdehldfiqshirrfclqyGaallytsvkedknldllykylvhkiyglpfrtP..alvvekdavliP 282
                 g +     lG+++ vv+  ++ i  lekeh +r+e +d++ +++r   l+ Ga+l+yts     nl  l       i+ l  r P    v++++ vl+P
  KHJ30826.1 209 GSGEWDIALGVPLCVVCQNSERIESLEKEHGWREEEFDYVLQFLRTILLKHGASLIYTSTSTTSNLQSLIHS-SLGIHSLLKRQPlkHNVIDREKVLVP 306
                 *****************************************************************9865543.23456666666622579********* PP

        DLIC 283 aGwdnekkiailyenlqtvkaedsyedvikkPPvrklv.hekeiqaed 329
                   wd+  ki +l + ++       ++  i + P+  +v +++++ ++d
  KHJ30826.1 307 PNWDSWGKIRVLRDGFDVEAVSMGWSHDIDQEPTFSTVkSNRDLISND 354
                 ****************99888888988888888877773577776555 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 6.8e-05
        DLIC 321 hek.eiqaedeqvflvkqqsllakqpatat.rgvespa 356
                 ++k e+++ed q fl++q+++l+ +   ++  g++s+ 
  KHJ30826.1 386 SNKlEVTSEDTQEFLARQLQILESNKLDTDhTGMDSSR 423
                 444499****************8776555525556554 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.02
        DLIC 384 kkidpklkaaaaseGvlanffnsllskksG 413
                     p+++++++++  la+ff+ l+++ +G
  KHJ30826.1 482 ETTPPDFTSNSSQNDALASFFEGLMQRGAG 511
                 5567889999999************99888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       686  (0.038262); expected 358.6 (0.02)
Passed bias filter:                      568  (0.0316805); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.39
# Mc/sec: 3991.91
//
Query:       KHJ30827.1  [L=382]
Description: putative sporulation-regulated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.5e-107  359.1   0.0   3.5e-107  357.9   0.0    1.5  2  Septin          Septin
    2.4e-05   24.4   0.0      6e-05   23.1   0.0    1.7  1  MMR_HSR1        50S ribosome-binding GTPase
     0.0037   16.8   0.3       0.31   10.6   0.0    2.4  2  GTP_EFTU        Elongation factor Tu GTP binding domain
      0.009   15.9   3.6      0.017   15.0   0.3    2.8  3  RsgA_GTPase     RsgA GTPase
  ------ inclusion threshold ------
      0.012   15.6   5.7        1.6    8.8   0.0    3.2  3  Dynamin_N       Dynamin family
      0.018   14.1   0.0      0.032   13.3   0.0    1.4  1  IIGP            Interferon-inducible GTPase (IIGP)
        0.2   11.9   1.9       0.39   11.0   0.1    2.2  2  AAA_22          AAA domain
       0.85    9.6   5.2        1.8    8.5   5.2    1.5  1  Ribosomal_S17e  Ribosomal S17
       0.91    8.8   3.4        0.4   10.0   0.2    1.9  2  FtsK_SpoIIIE    FtsK/SpoIIIE family
          4    7.9   9.2         14    6.1   4.8    2.2  2  AAA_23          AAA domain


Domain annotation for each model (and alignments):
>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  357.9   0.0  1.9e-110  3.5e-107       1     276 [.      18     297 ..      18     302 .. 0.95
   2 ?   -2.3   0.3       1.2   2.1e+03     131     139 ..     335     343 ..     307     365 .. 0.56

  Alignments for each domain:
  == domain 1  score: 357.9 bits;  conditional E-value: 1.9e-110
                 XEEEEEEEEEEBTTSSCCCCCCTTSSSS------------.------S-E..EEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHHHHHHHH CS
      Septin   1 kgieftlmvvGesglGkttlintlfetdlieeekleease.kkkktveik..kkkvvieedgvklnltviDtpgfGdavdnskswepiveyideqfeey 96 
                 kgi+f lmv+G+sg+G+tt++ntl+ +++   +  ++a++ + ++ v+i+  + + +++e+g+++ lt++DtpgfGd++dn+ s+  iv y++ q++++
  KHJ30827.1  18 KGIQFCLMVCGASGTGRTTFVNTLCGKKVLAGKDADDAANaHVEEGVRIRpiTVELELDEEGTRISLTIVDTPGFGDQIDNEASFGEIVGYLERQYDDI 116
                 79***************************99988888877689999***954555677899************************************** PP

                 HHHCTSS--.SS-----EEEEEEEE-TTSSSS-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT--------SSSS-SCCHHHH CS
      Septin  97 lreesklkR.kkivDkRvHaclyfisPtghglkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeikiyklpdeeededeeakel 194
                 l ees++kR  ++ D+RvHa+lyfi+Ptghgl++ld+elmk+ls +vn+iPvi+KaD+lt  El e Kk ++e++e++ i++y++p   e++de+++e+
  KHJ30827.1 117 LAEESRIKRnPRFRDNRVHALLYFITPTGHGLRELDIELMKRLSPRVNVIPVIGKADSLTPAELAESKKLVMEDIEHYRIPVYNFPYDIEEDDEDTVEE 215
                 *********999************************************************************************877777778999*** PP

                 HHHHHHC-SEEB-SSSSEEEESSSEEEEEEETTEEEETT-TTT-SCCHHHHHHHHHCHHHHHHHHHHTHHHHHHHHHH-XXX CS
      Septin 195 seklkeslPfaivgsneliekkgkkvrgRkypWGvvevenekhsdFlkLrklllkthledLkevteellYetyRseklsklk 276
                 + +l+  +Pfaivgs+e++e  g+kvr+R+ypWGvvev+n++hsdFl++r++ll++hl dLke+t++ lYe+yR+eklsk+ 
  KHJ30827.1 216 NAELRGLMPFAIVGSEETVEIAGRKVRARQYPWGVVEVDNPRHSDFLAIRSALLHSHLADLKEITHDFLYENYRTEKLSKSV 297
                 ******************************************************************************9875 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.2
                 HHHHHHHHT CS
      Septin 131 dvelmkkls 139
                 +v++ ++++
  KHJ30827.1 335 EVKVQREIN 343
                 222222222 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   3.3e-08     6e-05       3     100 ..      25     158 ..      23     171 .. 0.56

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 3.3e-08
                 EEEESTTSSHHHHHHHHHT..........STEEESSSTTSSSSEEEEEEE..ET..TEEEEEEECGGC.......................SSHHHHHH CS
    MMR_HSR1   3 aivGrpNvGKStLinaltg..........ekaivsdkpgtTrdinegrvk..lk..gkeielvDtpGl.......................iegaseek 64 
                 ++ G + +G +t++n+l+g          ++a +  + g+ + +++ +++  ++  + ++++vDtpG+                       i  a+e++
  KHJ30827.1  25 MVCGASGTGRTTFVNTLCGkkvlagkdadDAANAHVEEGVRIRPITVELEldEEgtRISLTIVDTPGFgdqidneasfgeivgylerqyddI-LAEESR 122
                 789***************944444433222344444456666666666654422223669*******7666666666666555433332221.122222 PP

                 HHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHHHHH CS
    MMR_HSR1  65 glgkaflaleeadlillvvdaseeklkpldeeleel 100
                   ++   + ++++++l+ +  + ++l++ld el + 
  KHJ30827.1 123 IKRNPRFRDNRVHALLYFITPTGHGLRELDIELMKR 158
                 222222234456666666654445677776666655 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   0.00017      0.31       7      82 ..      25      94 ..      21     101 .. 0.72
   2 ?    4.2   0.0     0.015        27     121     154 ..     161     210 ..     152     360 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00017
                EEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEE..TTCSSEEEEEEEESSSGG CS
    GTP_EFTU  7 giighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisle..ketkkylinliDtPGHvd 82
                +++g   +G tT++ +L  k+      g++a+     D +++  e g+ i   +++le  +e+++  ++++DtPG  d
  KHJ30827.1 25 MVCGASGTGRTTFVNTLCGKKVLA---GKDAD-----DAANAHVEEGVRIRPITVELEldEEGTRISLTIVDTPGFGD 94
                78999999*******999544443...44555.....566666666666666666666546899***********766 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.015
                 TTTEEEEEEESCGST.HHHHHHHHHHHHHHHHHH...............H CS
    GTP_EFTU 121 egvpiivfiNKmDrl.kaelkeiveevkqklsrk...............e 154
                  +v++i +i K+D l  ael e+++ v +++++                e
  KHJ30827.1 161 PRVNVIPVIGKADSLtPAELAESKKLVMEDIEHYripvynfpydieeddE 210
                 5799**********988899999988888885555556666555544441 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.3   9.4e-06     0.017     101     161 ..      23      92 ..       6      96 .. 0.64
   2 ?   -0.2   0.0      0.46   8.3e+02      39      73 ..     155     192 ..     143     220 .. 0.69
   3 ?   -2.2   0.2       1.9   3.3e+03      63      90 ..     322     349 ..     308     365 .. 0.62

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 9.4e-06
                  EEEEECSTTSSHHHHHHHHCTT-----S--....------------SEEEEEETT.....TEEEESS-SS CS
  RsgA_GTPase 101 tsvlvGqSGvGKStLinallpelelktgev....seklgrGkhTTtavellelae.....gglliDtPGf 161
                  + +++G SG G++t++n+l +++ l+ ++      ++ ++G      +  lel+e     + +++DtPGf
   KHJ30827.1  23 CLMVCGASGTGRTTFVNTLCGKKVLAGKDAddaaNAHVEEGVRIRPITVELELDEegtriSLTIVDTPGF 92 
                  46789****************9665554430000444555554444444444444222334468999998 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.46
                  HHHHHHTT-EEEEEEE-GGG--HHH...HHHHHHHHHH CS
  RsgA_GTPase  39 LvlaeekgiepvivlnKiDlleeee...eleelkeele 73 
                  L+   + +++++ v+ K+D l+ +e   + + ++e++e
   KHJ30827.1 155 LMKRLSPRVNVIPVIGKADSLTPAElaeSKKLVMEDIE 192
                  66666778999999*****9999994432333333333 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 1.9
                  HHHHHHHHHHHHTTSEEEE--TTTHTTH CS
  RsgA_GTPase  63 eeleelkeelealgyevllvsaktkegl 90 
                  e+l++ +e+l++++++v    ++++++l
   KHJ30827.1 322 EQLRREEEKLREIEVKVQREINEKRQEL 349
                  3477777777777777765444444444 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   0.00087       1.6       2      25 ..      25      48 ..      24      52 .. 0.92
   2 ?    7.3   0.0    0.0025       4.5      95     118 ..      76      99 ..      50     118 .. 0.71
   3 ?   -0.3   1.5      0.53   9.4e+02      57      83 ..     321     349 ..     285     375 .. 0.53

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00087
                EEEEBTTTTHHHHHHHHHTS--S- CS
   Dynamin_N  2 avvGsqSsGKSSvlnaLlgedilp 25
                +v+G+   G ++++n L+g+++l 
  KHJ30827.1 25 MVCGASGTGRTTFVNTLCGKKVLA 48
                8********************985 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0025
                 EEETTS-SEEEEE---B-SSSGTT CS
   Dynamin_N  95 ilsllvkgltlvDlPGldsvnkrd 118
                 + + ++  lt+vD+PG+ ++ +++
  KHJ30827.1  76 DEEGTRISLTIVDTPGFGDQIDNE 99 
                 455677789*******98876655 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.53
                 EE..T-EB--CHHHHHHHHHHHHHHHTSS CS
   Dynamin_N  57 ek..ekkledfsevreeieketekiagan 83 
                 e+  ++++e++ e++ ++++e +++ +++
  KHJ30827.1 321 EEqlRREEEKLREIEVKVQREINEKRQEL 349
                 22333333333333333333333322221 PP

>> IIGP  Interferon-inducible GTPase (IIGP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.8e-05     0.032      35      70 ..      21      60 ..       5      93 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.8e-05
                -EEEEEEESTTSSHHHHHHHHTT....--TTSTTS--SSC CS
        IIGP 35 klkiavtGdsGnGkssFinaLRl....iGheeedsAptGv 70
                +  ++v G sG+G+ +F+n+L +     G++++d+A+  v
  KHJ30827.1 21 QFCLMVCGASGTGRTTFVNTLCGkkvlAGKDADDAANAHV 60
                55678****************64333369******98765 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   0.00022      0.39       7      30 ..      23      46 ..      20      86 .. 0.73
   2 ?   -1.0   0.1       1.1     2e+03      48      91 ..     303     347 ..     257     365 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00022
      AAA_22  7 ilvvtGesGtGKTtllrrlleqld 30
                +l+v+G sGtG+Tt +++l  +++
  KHJ30827.1 23 CLMVCGASGTGRTTFVNTLCGKKV 46
                89*************999876665 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.1
      AAA_22  48 psst.sskdllrellralglelkaerlsseellealeqalrarav 91 
                 ++st +++dl+++ +r  +++l +e+ +++e+  ++++ +++++ 
  KHJ30827.1 303 TESTmNPEDLASQSVRLKEEQLRREEEKLREIEVKVQREINEKRQ 347
                 455557777777777777777777666666666666666666665 PP

>> Ribosomal_S17e  Ribosomal S17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   5.2     0.001       1.8      61     110 ..     326     375 ..     321     381 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.001
                     TTSS--SS---HHHHHHHHHHH-----------------HHHHHHHHHH- CS
  Ribosomal_S17e  61 iqkgpvrgislklqeeererrdnyvpevsaldqeaievdkdtkemlkslg 110
                      ++++ r i +k+q+e  e+r++    +s+l++ +++++++ +  l+  +
      KHJ30827.1 326 REEEKLREIEVKVQREINEKRQELLARESQLKEIEARMQREQSSHLELTN 375
                     578999**************************999999998888887664 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.2   0.00022       0.4      42      59 ..      24      41 ..      13      43 .. 0.94
   2 ?   -1.7   0.3      0.84   1.5e+03     108     141 ..     315     349 ..     301     379 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00022
                  EEEE--TTSSHHHHHHHH CS
  FtsK_SpoIIIE 42 llvaGatgsGKStalntL 59
                  l+v+Ga+g+G +t++ntL
    KHJ30827.1 24 LMVCGASGTGRTTFVNTL 41
                  79***************9 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.84
                   HHHHHHHHHHHHH.HHHHHTT-SSHHHHHHHHHHH CS
  FtsK_SpoIIIE 108 aleeLvkemeery.alfreagvrsiaaydgeiaed 141
                       L +e  +r+ +++re  v+  +  +++ +e 
    KHJ30827.1 315 QSVRLKEEQLRREeEKLREIEVKVQREINEKRQEL 349
                   44455555555555777777777777766666654 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1     0.042        75      24      68 ..      26      74 ..      18     133 .. 0.70
   2 ?    6.1   4.8    0.0079        14     153     198 ..     311     362 ..     251     369 .. 0.58

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.042
      AAA_23 24 ItGpNGaGKTTildAikl..aLygetprlsrks..grgfeksdveiese 68
                ++G  G+G TT+++ ++   +L g+ ++   +   ++g   + +++e e
  KHJ30827.1 26 VCGASGTGRTTFVNTLCGkkVLAGKDADDAANAhvEEGVRIRPITVELE 74
                79************99965577776655544445666666666666666 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0079
      AAA_23 153 e....rleelekeleeledekkllekl..eqekekekeleeleeeleeilke 198
                 +     ++  e++l+ +e++ +++e +   +++ek++el + e++l+ei+  
  KHJ30827.1 311 DlasqSVRLKEEQLRREEEKLREIEVKvqREINEKRQELLARESQLKEIEAR 362
                 1444434444444444444444444444345566666666666666666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1486  (0.0828825); expected 358.6 (0.02)
Passed bias filter:                      698  (0.0389313); expected 358.6 (0.02)
Passed Vit filter:                       117  (0.00652574); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 2587.49
//
Query:       KHJ30828.1  [L=235]
Description: putative rna binding domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-18   64.9   0.0    1.4e-17   63.3   0.0    1.9  2  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
    0.00036   20.6   0.0     0.0012   18.9   0.0    2.0  1  RRM_7     RNA recognition motif
  ------ inclusion threshold ------
        2.4    7.6   5.5        1.6    8.2   4.2    1.4  1  Sec62     Translocation protein Sec62


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.3   0.0   2.3e-21   1.4e-17       1      69 [.      35     104 ..      35     105 .. 0.98
   2 ?   -1.8   0.0      0.48   2.9e+03      47      64 ..     177     194 ..     158     198 .. 0.75

  Alignments for each domain:
  == domain 1  score: 63.3 bits;  conditional E-value: 2.3e-21
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 +++g+Lp +++e ++ ++Fs++G+ + ++lvrd etgks+gfaf ++e++++ + A+++l g  + gr+l
  KHJ30828.1  35 IYIGGLPLELSEGDIITIFSQYGEPTYLNLVRDkETGKSRGFAFLKYEDQRSTDLAVDNLGGAVILGRTL 104
                 8*******************************************************************97 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.48
                 SSHHHHHHHHHHHTTEEE CS
       RRM_1  47 eskedAekAlealngkkl 64 
                 e+k++ + Al++l  kk 
  KHJ30828.1 177 EKKDQIAVALAKLKSKKC 194
                 678888889998888775 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0     2e-07    0.0012       4      68 ..      35      92 ..      32     115 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 2e-07
       RRM_7  4 vFvGGlPiDiteeelkatfkefgkvlvdwPkkaeskkkaaenskaakgyvflvfedeksvkaLle 68
                +++GGlP +++e ++++ f+++g+ +  + +  + k++        +g++fl +ed++s    ++
  KHJ30828.1 35 IYIGGLPLELSEGDIITIFSQYGEPT--YLNLVRDKETG-----KSRGFAFLKYEDQRSTDLAVD 92
                89*********************854..22333332222.....2469********999876665 PP

>> Sec62  Translocation protein Sec62
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   4.2   0.00027       1.6       9      87 ..     136     229 ..     129     235 .] 0.74

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00027
       Sec62   9 kkvvralksekek...kkskkkkeklkevkkkekaekvfkelkksqlalrveklkekekkkkkee............kkkkkkkkkkvkleiee 87 
                  k++ + ks++e+   k++++  + l++ ++++ +++ f ++kk+q+a+ ++klk+k+++k+ ++             +++ ++k+ ++l+ + 
  KHJ30828.1 136 DKIIDQDKSHDERpmiKEEQELVNLLRDLDDEDPMKSYFVQEKKDQIAVALAKLKSKKCHKNPRKhrihhhgsrnrsLSRSDRNKRDPRLNDSG 229
                 56666666666652225555555677788888889**************************988788888888877766677777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       859  (0.0479112); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1862.01
//
Query:       KHJ30829.1  [L=389]
Description: putative phosphatidylinositol -bisphosphate-binding [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0017   19.2   0.3          2    9.4   0.0    3.3  4  WD40             WD domain, G-beta repeat
     0.0021   17.4   0.0      0.006   16.0   0.0    1.6  1  Nbas_N           Neuroblastoma-amplified sequence, N terminal
     0.0033   17.7   0.0       0.99    9.7   0.0    3.7  5  ANAPC4_WD40      Anaphase-promoting complex subunit 4 WD40 do
  ------ inclusion threshold ------
      0.023   15.0   0.5        5.4    7.5   0.0    3.3  4  Kelch_6          Kelch motif
       0.11   12.9   0.4         16    6.0   0.0    3.3  3  Clathrin_propel  Clathrin propeller repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0         5   1.8e+04      15      27 ..      17      29 ..      12      34 .. 0.73
   2 ?   -2.9   0.0       4.5   1.6e+04      31      38 .]      80      87 ..      71      87 .. 0.83
   3 !    6.1   0.0    0.0064        23       5      33 ..     174     203 ..     170     208 .. 0.81
   4 !    9.4   0.0   0.00055         2      13      38 .]     228     253 ..     215     253 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 5
                EEEEETTSSEEEE CS
        WD40 15 slafspdgawlas 27
                s+af++d + ++ 
  KHJ30829.1 17 SVAFNQDASCFSV 29
                6778888877654 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 4.5
                TSEEEEEE CS
        WD40 31 DgtvriWd 38
                 ++v +Wd
  KHJ30829.1 80 QNKVVVWD 87
                57899998 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.0064
                 EEEESS.SSEEEEEEETTSSEEEEEETTSE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgt 33 
                  ++ +H ss ++l  s++g+ +a++s+ gt
  KHJ30829.1 174 SIIPAHgSSLRALVLSQNGQIVATASETGT 203
                 56679*8889**************996444 PP

  == domain 4  score: 9.4 bits;  conditional E-value: 0.00055
                 EEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40  13 vtslafspdgawlasG.sdDgtvriWd 38 
                 + sla sp+g++la + sd+ t++i+d
  KHJ30829.1 228 IFSLAISPSGRLLA-AiSDKSTLHIFD 253
                 689*********98.5599*****998 PP

>> Nbas_N  Neuroblastoma-amplified sequence, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.7e-06     0.006     200     260 ..     191     256 ..     178     265 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.7e-06
      Nbas_N 200 yeddvgalakkrgllkllslklysr.....kaeekdgvfkmslspdgtllavihfsgklsiwdips 260
                 +++ v++ +++ +l+++ + +  +r     ++ ++  +f +++sp g lla+i     l i+dip 
  KHJ30829.1 191 NGQIVATASETGTLIRIFATQSCARiaelrRGVDQAVIFSLAISPSGRLLAAISDKSTLHIFDIPN 256
                 44456667777888999888877761111145567778**************************96 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       4.4   1.6e+04      58      77 ..      79      98 ..      78     103 .. 0.72
   2 ?   -1.3   0.0      0.76   2.7e+03      56      72 ..     157     173 ..     131     177 .. 0.77
   3 ?    4.7   0.0      0.01        37      31      68 ..     175     211 ..     153     221 .. 0.69
   4 !    9.7   0.0   0.00028      0.99      11      69 ..     196     256 ..     193     272 .. 0.78
   5 ?   -1.0   0.0      0.61   2.2e+03      34      60 ..     333     359 ..     322     361 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 4.4
  ANAPC4_WD40 58 sdgevrlldaesgkvvhsls 77
                 s+++v + d  ++kvv +++
   KHJ30829.1 79 SQNKVVVWDDAKKKVVLQIH 98
                 56788888888888887765 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.76
  ANAPC4_WD40  56 aysdgevrlldaesgkv 72 
                  +   g+v+l+d  +g v
   KHJ30829.1 157 GRTSGQVQLVDLTTGSV 173
                  66789999999999876 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.01
  ANAPC4_WD40  31 tleedkedsevrsLaWkpdgklLavaysdge.vrlldae 68 
                   +  ++++s+ r+L  +++g++ a a + g+ +r++  +
   KHJ30829.1 175 II--PAHGSSLRALVLSQNGQIVATASETGTlIRIFATQ 211
                  44..67788888888999999999988888525666554 PP

  == domain 4  score: 9.7 bits;  conditional E-value: 0.00028
  ANAPC4_WD40  11 Alatedgel.lvfRl.ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaes 69 
                  A a+e+g l ++f + +  r+ +l +  ++  + sLa +p+g+lLa   ++++++++d+ +
   KHJ30829.1 196 ATASETGTLiRIFATqSCARIAELRRGVDQAVIFSLAISPSGRLLAAISDKSTLHIFDIPN 256
                  5556665541333333567888998889999999***********************9865 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 0.61
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdg 60 
                  ++k++s  r + W  d+++++++   +
   KHJ30829.1 333 QSKSKSPQRVIGWVDDETIIVIGAGSN 359
                  456667778899999999999987665 PP

>> Kelch_6  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0    0.0015       5.4       6      35 ..      59      88 ..      58      97 .. 0.87
   2 ?   -2.5   0.0       2.1   7.4e+03       8      41 ..     146     174 ..     142     178 .. 0.67
   3 ?   -3.1   0.0       3.3   1.2e+04      36      47 ..     291     302 ..     290     306 .. 0.73
   4 ?    3.8   0.0     0.021        76      10      34 ..     347     366 ..     345     371 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0015
     Kelch_6  6 slvsvggkiYifGGytdsspylnkvwvydp 35
                ++v   ++i ++GG +++  ++nkv v+d 
  KHJ30829.1 59 QMVGKSNFIGMVGGGKQPKFSQNKVVVWDD 88
                788999************99******9995 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.1
     Kelch_6   8 vsvggkiYifGGytdsspylnkvwvydpetksWe 41 
                 ++ ++   +f G+t       +v++ d+ t+s +
  KHJ30829.1 146 CCLDSNTLAFPGRTS-----GQVQLVDLTTGSVS 174
                 556666667777776.....88888888888766 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 3.3
     Kelch_6  36 etksWeqlpplp 47 
                  +k+W +l+ +p
  KHJ30829.1 291 NNKKWGFLGKIP 302
                 589999998777 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.021
     Kelch_6  10 vggkiYifGGytdsspylnkvwvyd 34 
                  +++i ++G  ++     +k++++ 
  KHJ30829.1 347 DDETIIVIGAGSN-----SKWEKFI 366
                 689**********.....9999985 PP

>> Clathrin_propel  Clathrin propeller repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0    0.0045        16      20      36 ..     145     168 ..     143     168 .. 0.79
   2 ?    3.3   0.0     0.032   1.1e+02       8      36 ..     228     254 ..     225     254 .. 0.86
   3 ?   -3.0   0.2       3.3   1.2e+04       4      16 ..     261     273 ..     260     274 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0045
                      EEEEE.......CETEEEEEEEET CS
  Clathrin_propel  20 iiain.......gtkkGqvqlysv 36 
                      ++++        g++ Gqvql+++
       KHJ30829.1 145 LCCLDsntlafpGRTSGQVQLVDL 168
                      66666667777799********97 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.032
                      ECCCEEEEECCEEEEEECETEEEEEEEET CS
  Clathrin_propel   8 nfptatneswlfiiaingtkkGqvqlysv 36 
                      +f+ a+ +s   + ai+  +k+ ++++++
       KHJ30829.1 228 IFSLAISPSGRLLAAIS--DKSTLHIFDI 254
                      677788899999999**..9999****97 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 3.3
                      CEEEECCCEEEEE CS
  Clathrin_propel   4 sqiinfptatnes 16 
                      s+ii+ +t+ +++
       KHJ30829.1 261 SPIIDISTCNQNP 273
                      6799999998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2626.79
//
Query:       KHJ30830.1  [L=368]
Description: putative mrt a raffinose family of oligosaccharides transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-40  138.9   4.6    2.1e-40  138.9   4.6    1.6  2  Sugar_tr    Sugar (and other) transporter
      3e-19   69.2  22.8    7.3e-11   41.6   7.1    2.2  2  MFS_1       Major Facilitator Superfamily
  ------ inclusion threshold ------
       0.05   12.4   3.1      0.093   11.6   3.1    1.5  1  MFS_1_like  MFS_1 like family
       0.34   11.0   5.7       0.82    9.7   0.5    2.4  2  DUF5418     Family of unknown function (DUF5418)


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.6      0.24   1.1e+03     399     432 ..       3      35 ..       1      53 [. 0.55
   2 !  138.9   4.6   4.7e-44   2.1e-40       4     220 ..     113     326 ..     110     340 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.24
                 HHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHH CS
    Sugar_tr 399 nflisllfpiiteaigggyvflvfaglavlfiif 432
                 n +++ +  ++++++    + +  a+l++++iif
  KHJ30830.1   3 NTVVNKMVSTMVNKMV-NTMVNTMAVLNLAAIIF 35 
                 4444444455555554.33334444444444444 PP

  == domain 2  score: 138.9 bits;  conditional E-value: 4.7e-44
                 HHHHHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS- CS
    Sugar_tr   4 vaalggllfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsv 102
                 + +l  +++gY   +++ f++++ f  ++g+   ++++e  ++++  +    l+G+++G  ++ +++dr+G++k+++i+ + +v+   ++++++   s+
  KHJ30830.1 113 LLSLVVIMEGYANLLLAQFYAMPTFCQRYGVIGPYGTYEIPTLWQAGLSIGCLAGETFGLCTSAIAVDRLGYRKTMIISLLALVAFVNIIFFSQ---SL 208
                 5667779*****************************99988888887777899*****************************************...9* PP

                 TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHH.HTSS-TTHHHHHHHCCHHHHHHHHHHGGGS---HHHHHH CS
    Sugar_tr 103 evlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglgl.nktsnadgwrillglqlvpallllilllflPESPrylve 200
                  vl++g +l+G+++G++++l+ +y+s ++p klR +l+++++l++ +G+l+++++   l  ++++ + +ri+l+lq++ +l ++i+++f+PESP++lv 
  KHJ30830.1 209 VVLLIGEILCGVPLGVFQTLSCTYASDVCPMKLRPFLTTYTNLCWLIGQLLSSGVLRMLvGRSDQ-WSYRIPLALQWICPLPVAIAIFFAPESPWWLVR 306
                 *******************************************************9999555555.********************************* PP

                 TT-HHHHHHHHHHHHHCHHH CS
    Sugar_tr 201 kgkeeeakevlaklrgeeda 220
                 +g++e+a++ l +l +++d+
  KHJ30830.1 307 HGRTEDARRALTRLTNSKDQ 326
                 *************9988765 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   7.7   2.1e-14   9.5e-11     192     352 ..      94     260 ..      24     261 .. 0.74
   2 !   41.6   7.1   1.6e-14   7.3e-11      44     198 ..     167     319 ..     157     352 .. 0.75

  Alignments for each domain:
  == domain 1  score: 41.2 bits;  conditional E-value: 2.1e-14
       MFS_1 192 gpaplvpawkallkdpvlwillialllfffgfsg.......lltllplylqevlgls.........glllaglllallalvgailallagrls.drlgr 273
                 + +  ++ wk+ +++   w++l++l++++    g        ++ +p++  +++g           +l++ag  l++++l+g  ++l++++++ drlg 
  KHJ30830.1  94 EMSVTAS-WKL-WRPASYWSILLSLVVIM-E--GyanlllaQFYAMPTF-CQRYGVIgpygtyeipTLWQAG--LSIGCLAGETFGLCTSAIAvDRLGY 184
                 2222222.443.44444563333333332.2..2224566689999998.9999998999999999******..************************* PP

       MFS_1 274 rrrlllallllllaalglallavtssavllllvlvliGfglgfvfpsllalasdlappeeagtasglfntagslggalg 352
                 r++++++ll+l++++ ++++       v+ll++ +l+G+ lg++++++ ++asd++p + + +++ ++n+++ +g +l+
  KHJ30830.1 185 RKTMIISLLALVAFVNIIFFSQSL---VVLLIGEILCGVPLGVFQTLSCTYASDVCPMKLRPFLTTYTNLCWLIGQLLS 260
                 888888888888888888887777...999999999***************************************9986 PP

  == domain 2  score: 41.6 bits;  conditional E-value: 1.6e-14
       MFS_1  44 gaavaslplGrlsdrfGrrrvlllglllfalglllllfasslw.lllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllg 141
                 g  ++    +  +dr+G r++++++ll++++++ +++f s++  +ll++ +l+G+  g++ +++ ++++d+ p + r++ + + ++++ +G +l  ++ 
  KHJ30830.1 167 GETFGLCTSAIAVDRLGYRKTMIISLLALVAFVNIIFF-SQSLvVLLIGEILCGVPLGVFQTLSCTYASDVCPMKLRPFLTTYTNLCWLIGQLLSSGVL 264
                 5566667778899*******************888889.77777******************************************************9 PP

       MFS_1 142 gllasslgWravfyilaivsllafv.lfllllpeepperkrkspkeeekgtgpaplvp 198
                  +l+     ++++ i  ++  ++ + ++++ +++++++ + +++ + e  +++++l+ 
  KHJ30830.1 265 RMLVGRSD-QWSYRIPLALQWICPLpVAIAIFFAPESPWWLVRHGRTE--DARRALTR 319
                 99995544.566666666666665554446666777776666666663..34444444 PP

>> MFS_1_like  MFS_1 like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   3.1   2.1e-05     0.093     260     350 ..     154     245 ..       3     263 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.1e-05
  MFS_1_like 260 tllGslvalgvva.eiplfffaeklleklGhvklliiallayilrfllyaii.enawlvlpievLhgisfgllwaaaveyvskiapksleatg 350
                 tl+ + + +g++a e   + ++   +++lG +k +ii+lla ++ f+ + ++ ++++++l+ e+L g+ +g++     +y+s++ p++l+ ++
  KHJ30830.1 154 TLWQAGLSIGCLAgETFGLCTSAIAVDRLGYRKTMIISLLALVA-FVNIIFFsQSLVVLLIGEILCGVPLGVFQTLSCTYASDVCPMKLRPFL 245
                 56666666776652444466677779*************99876.5555555599999****************************9987665 PP

>> DUF5418  Family of unknown function (DUF5418)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.5   0.00018      0.82       5      38 ..       7      40 ..       1      57 [. 0.83
   2 ?    3.5   0.6     0.016        71      24      96 ..     189     265 ..     180     293 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00018
     DUF5418  5 hkahasfilkvilalvsysialilaiiiysiffk 38
                 k  ++++ k+++++v+ +  l la ii+s++ +
  KHJ30830.1  7 NKMVSTMVNKMVNTMVNTMAVLNLAAIIFSLYSN 40
                46778899**********************9976 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.016
     DUF5418  24 ialilaiiiy..siffkieenlfllc.illalpiiyflilillGlthreleylsiy.dkykllckfvreltlsllas 96 
                 i ++la++ +   iff +   ++l+  il  +p+ +f+ l  +     +   l  +   y  lc ++ +l +s +  
  KHJ30830.1 189 IISLLALVAFvnIIFFSQSLVVLLIGeILCGVPLGVFQTLSCTYASDVCPMKLRPFlTTYTNLCWLIGQLLSSGVLR 265
                 45556665542269999999999998999999999999888777766665555543256777777777777666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 2647.96
//
Query:       KHJ30831.1  [L=151]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 1088.86
//
Query:       KHJ30832.1  [L=291]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 2104.77
//
Query:       KHJ30833.1  [L=393]
Description: hypothetical protein EV44_g3495 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.02   14.8   2.7       0.12   12.2   0.3    2.2  2  Mei5      Double-strand recombination repair protein


Domain annotation for each model (and alignments):
>> Mei5  Double-strand recombination repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.9    0.0074   1.3e+02      73     116 ..      73     124 ..      61     161 .. 0.72
   2 ?   12.2   0.3   6.7e-06      0.12      95     146 ..     169     220 ..     119     222 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.0074
                 XXXXX......XXXXXXXXXXXXXXXXXXX.....................X CS
        Mei5  73 qqsikildseeeeskllkstiknrdvcksesslilnslkekie........l 116
                   + k  d+ee+e k  k + k+r+    ++sl++n+  ++++         
  KHJ30833.1  73 LANQKFADKEENEIKKAKLIAKDRETLTKGNSLKFNGGLIHLHsnprsitvK 124
                 4455667999999999*********999999999998888887666665441 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 6.7e-06
                 XXXXXXXX.............XXXXHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Mei5  95 nrdvcksesslilnslkekielekkeLeeekakLekqvrekeelLrrLklvk 146
                   +vc+ e s+ l+s+ + + l+ +++++  ++L+ qv++ e  Lr  +l+k
  KHJ30833.1 169 TASVCQPEASFDLSSAAQAVRLNNTDINSLNKRLKWQVENSERGLRYVELDK 220
                 46899999**************************************999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2831.64
//
Query:       KHJ30834.1  [L=80]
Description: putative small nuclear ribonucleoprotein g [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-21   74.4   0.5    4.6e-21   74.3   0.5    1.0  1  LSM       LSM domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.3   0.5   2.6e-25   4.6e-21       2      66 ..       7      70 ..       6      71 .. 0.97

  Alignments for each domain:
  == domain 1  score: 74.3 bits;  conditional E-value: 2.6e-25
                HHHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEEE CS
         LSM  2 flkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivlis 66
                 lkk+++k++ v+l++ r+++G L+g+D f+N+vL+d++e ++++ ek klg+v+iRGn++v+++
  KHJ30834.1  7 ELKKYLEKRLFVQLNGSRKVIGLLRGYDVFLNVVLDDAVEEKEGG-EKVKLGMVVIRGNSVVMLE 70
                69*******************************************.****************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       310  (0.0172904); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.39
# Mc/sec: 622.85
//
Query:       KHJ30835.1  [L=224]
Description: hypothetical protein EV44_g3246 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       861  (0.0480228); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1653.49
//
Query:       KHJ30836.1  [L=316]
Description: putative transcription elongation factor s-ii [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-28   97.1   1.6    9.8e-28   96.9   0.4    1.7  2  TFIIS_M     Transcription factor S-II (TFIIS), central domain
    1.4e-18   66.5   6.0    2.7e-18   65.5   6.0    1.5  1  TFIIS_C     Transcription factor S-II (TFIIS)
    1.9e-11   43.8   3.1    3.7e-11   42.9   3.1    1.5  1  Med26       TFIIS helical bundle-like domain
  ------ inclusion threshold ------
      0.043   13.6   1.4      0.078   12.8   0.1    2.0  2  betaPIX_CC  betaPIX coiled coil
          1    9.2   5.4       0.48   10.3   0.6    2.6  3  zf-ZPR1     ZPR1 zinc-finger domain


Domain annotation for each model (and alignments):
>> TFIIS_M  Transcription factor S-II (TFIIS), central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.2   4.1e+03      24      37 ..      56      78 ..      15      92 .. 0.57
   2 !   96.9   0.4   2.7e-31   9.8e-28       2     111 ..     130     236 ..     129     237 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.2
                ..........--THHHHHHHHHH CS
     TFIIS_M 24 e.........eedveelaaeiEe 37
                          +++v++laaei +
  KHJ30836.1 56 IiisklkaspSKEVARLAAEIVS 78
                03333322223466666666654 PP

  == domain 2  score: 96.9 bits;  conditional E-value: 2.7e-31
                 HHHHHHHHHHHHHTT---...-.--THHHHHHHHHHHHHHHT------HHHHHHHHHHHHHS-TT-HHHHHTSSSS--STTTTS---TTTSS-HHHHHH CS
     TFIIS_M   2 kvRdkcrelLaealeedsseaeeeedveelaaeiEealfekekkstdkkykqkvrslvfNLkdkkNpeLrrrvlsgeispeklvkmspeElaseelkee 100
                 + Rd c+ lL+++l+ +s+e++  +++ + a+e+E+a+fe +++  + +y++k+rsl++NLk  +N eL ++v+sgei+ +++v+ms++El+s ++++e
  KHJ30836.1 130 PSRDACIGLLYNGLCFMSEESS--NRIISKALEVEKAAFE-HFGGDTGEYRAKLRSLFQNLKAVSNRELGQKVMSGEITSSRFVTMSHDELKSSQRRQE 225
                 57****************7654..8***************.99******************************************************** PP

                 HHHHHHHHHHT CS
     TFIIS_M 101 reklekealee 111
                 +ek+ ke++++
  KHJ30836.1 226 DEKILKENMKK 236
                 *********97 PP

>> TFIIS_C  Transcription factor S-II (TFIIS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.5   6.0   7.7e-22   2.7e-18       2      39 .]     251     288 ..     250     288 .. 0.98

  Alignments for each domain:
  == domain 1  score: 65.5 bits;  conditional E-value: 7.7e-22
     TFIIS_C   2 kCpkCgsreayffqlQtRsaDEpmtvfykCtkCghrWr 39 
                 kC kCg++++++ q+QtRsaDEpmt+f++Ct Cg+rW+
  KHJ30836.1 251 KCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWK 288
                 8************************************7 PP

>> Med26  TFIIS helical bundle-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   3.1     1e-14   3.7e-11       2      53 .]      34      84 ..      33      84 .. 0.92

  Alignments for each domain:
  == domain 1  score: 42.9 bits;  conditional E-value: 1e-14
                HHHHS---....H.HHHHHSHHHHHHHHHH-TTS-HHHHHHHHHHHHHHHHHH CS
       Med26  2 iLaqLeklpitte.tLkstgIGkvVnalrkhkhetaevktlAksLvekWkkav 53
                iL+ L+k +i+te +L++t+ G+++ +l+   ++++ev++lA+++v+kWkk++
  KHJ30836.1 34 ILEILKKDVIPTEeLLRTTKAGIIISKLKA--SPSKEVARLAAEIVSKWKKII 84
                9*******99999899************65..55*****************97 PP

>> betaPIX_CC  betaPIX coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       1.2   4.1e+03      45      59 ..       9      23 ..       7      27 .. 0.56
   2 ?   12.8   0.1   2.2e-05     0.078      11      36 ..     224     249 ..     221     252 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.2
  betaPIX_CC 45 qelkqenkklkksle 59
                +e++++ k l+k++ 
  KHJ30836.1  9 REVERNIKALQKAVT 23
                556666666666554 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 2.2e-05
  betaPIX_CC  11 peeekiiveelksnqtvleekslVDt 36 
                 +e+eki+ e++k+ q+ + eks+ D+
  KHJ30836.1 224 QEDEKILKENMKKAQVPMAEKSISDA 249
                 69*********************998 PP

>> zf-ZPR1  ZPR1 zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.2      0.18   6.3e+02      91     140 ..      37      85 ..       7      93 .. 0.50
   2 ?   -2.9   0.0       1.5   5.6e+03     122     141 ..     173     193 ..     155     205 .. 0.71
   3 ?   10.3   0.6   0.00013      0.48      12      48 ..     231     267 ..     226     287 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.18
     zf-ZPR1  91 tlegrlttvEGlLeqikeele.keegdqaeredeekekieeflekleelie 140
                  l+ ++   E lL+ +k+ +  ++ + +++  +e ++ ++e+++k +++i+
  KHJ30836.1  37 ILKKDVIPTEELLRTTKAGIIiSKLKASPS--KEVARLAAEIVSKWKKIIQ 85 
                 444555556666776666663322222222..2445555555555555555 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.5
     zf-ZPR1 122 d.eekekieeflekleelieg 141
                 + e ++k+++++++l+++ + 
  KHJ30836.1 173 TgEYRAKLRSLFQNLKAVSNR 193
                 346678888888888888774 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.00013
     zf-ZPR1  12 etrllltkiPyfkeviimsfeCehCgyknnevksage 48 
                 ++++++ ++P+ ++ i  +++C +Cg k+    +a++
  KHJ30836.1 231 KENMKKAQVPMAEKSISDALKCGKCGQKKVSYSQAQT 267
                 6799***********************9987766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1383  (0.0771376); expected 358.6 (0.02)
Passed bias filter:                      729  (0.0406604); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2339.28
//
Query:       KHJ30837.1  [L=498]
Description: putative s-adenosyl-l-methionine-dependent methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.6e-41  141.5   0.0    5.2e-41  141.0   0.0    1.2  1  Methyltransf_28  Putative S-adenosyl-L-methionine-dependent m
     0.0034   17.3   0.0     0.0062   16.4   0.0    1.3  1  PRMT5            PRMT5 arginine-N-methyltransferase


Domain annotation for each model (and alignments):
>> Methyltransf_28  Putative S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.0   0.0   5.8e-45   5.2e-41       2     253 ..     182     453 ..     181     460 .. 0.82

  Alignments for each domain:
  == domain 1  score: 141.0 bits;  conditional E-value: 5.8e-45
  Methyltransf_28   2 laiwlleewqalgrpskklrliElGpGkGtLmadvLrtlrkflpefyealeyhlvEaSpqlrerQknrLkekakevkk....estvkslgvkve 91 
                      +a++l+++++ ++ p ++l ++E+G+G+GtLm ++L+ +r++ p++y++++++++E+S++l++ Q + L ++a++ ++    e+ +ks+ +   
       KHJ30837.1 182 IARYLVSNYRLVQYPYEDLIIYEMGAGNGTLMINILDFIRNTDPSVYSRTKFKIIEISENLARLQHQQLFRNADARGHlkkvEIINKSIFE--- 272
                      9********************************************************************8888777776668888888888... PP

  Methyltransf_28  92 WleelkeipeetgfilanEffDaLPihqfertedg..wrellveltpe......................kkakekefrltl.spsetdplsev 160
                      W + +      ++++la E+fD+L++++++++  +    + +v ++ +                      + a++++      +p ++++l++v
       KHJ30837.1 273 WDQIV----ASPCYFLALEVFDNLAHDCIRYHPMTeePLQGYVLIDSKgefyafysrvldpiaarflqvrHAATDGQ----YpRPLPSKALRNV 358
                      75533....389******************99888443455555554477788777777777776655433333332....2255555566666 PP

  Methyltransf_28 161 lpklskrlkaleegsrieispeaeallediaerlakegGaaLiiDYge.ssse..pngtL.rairkhklv..d.pleepGevDltadvDFtala 247
                      ++ l  + +    ++  +i++++++++ ++a++++   + + + D+ + ++s+   n+++ +  +++++v  + pl+++G++D+ +++DF+ +a
       KHJ30837.1 359 MSYLPFTPN---LSDPEYIPTRLMQFFDILAKFFPC--HKLVTSDFHTlPDSVkgINAPVvQTRYQRRVVtvStPLVHQGYFDILFPTDFSVVA 447
                      665555544...889*********************..***********9999999999987778888889955*******************9 PP

  Methyltransf_28 248 eaaeea 253
                       ++ ++
       KHJ30837.1 448 PIYMAI 453
                      998766 PP

>> PRMT5  PRMT5 arginine-N-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   6.9e-07    0.0062      42     134 ..     177     275 ..     172     288 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 6.9e-07
                 HHHHHHHHHHHHHCTCCGTCC.-EEEEEEES-TTSHHHHHHHHHHHHHCCC.....EEEEEEEES-HHHHHH..HHHHHHHHTTCCGCEEEES-CCCCC CS
       PRMT5  42 lYeeAiekalsdlkkekkkksekklvilvvGaGRGplvdralkaleetkvt.....kvkivavEKnpnavvt..LqkkvneekWeekveviksdmrelk 133
                  Y eAi+++l+++ +  +    ++l+i+ +GaG G l+ ++l+ +++t+ +     k+ki+ +  n + + +  L ++   +   +kve+i++ + e++
  KHJ30837.1 177 YYGEAIARYLVSNYRLVQYPY-EDLIIYEMGAGNGTLMINILDFIRNTDPSvysrtKFKIIEISENLARLQHqqLFRNADARGHLKKVEIINKSIFEWD 274
                 599********9999887777.89********************9999844455457788888777655443113344445557789******999998 PP

                 H CS
       PRMT5 134 a 134
                 +
  KHJ30837.1 275 Q 275
                 6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (498 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3564.36
//
Query:       KHJ30838.1  [L=585]
Description: putative mitochondrial translocase complex component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-39  133.9   0.0    6.5e-39  133.2   0.0    1.4  1  NIF       NLI interacting factor-like phosphatase


Domain annotation for each model (and alignments):
>> NIF  NLI interacting factor-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.2   0.0   3.6e-43   6.5e-39       1     156 []     295     442 ..     295     442 .. 0.95

  Alignments for each domain:
  == domain 1  score: 133.2 bits;  conditional E-value: 3.6e-43
         NIF   1 ktLVLDLDetLvhsklekskklkvegekvevsvlkRpgldefLkelsklyevvifTasseeyaeavidildpekkllshrlyrescvkkkgeyvKdLsl 99 
                 +tLVL L+++L++s++         +++++++++kRpg+d+fL++ls++ye+v+fT + ++ ae++i++ldp++  +   l+re++  ++g+y+KdLs 
  KHJ30838.1 295 YTLVLGLEDLLICSEW---------TREHGWRLAKRPGVDYFLRYLSQYYELVVFTTQPSHLAEPIIRKLDPYHI-IMWPLFREATLYENGKYTKDLSF 383
                 79*************9.........99**********************************************96.999*******888********** PP

         NIF 100 lgrdlsrvvivDdspdsfelqpengipiksffsdkkDneLlkllpllkela.kv.ddvr 156
                 l+rd s+v+i+D ++  ++ qpen+i  +++ +d +D+eL +l+p+l+ +  ++ +dvr
  KHJ30838.1 384 LNRDPSKVIILDTDKAHVKNQPENAIILEPWRGDINDKELVSLIPFLEYIPtMAySDVR 442
                 ************************************************88754447775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       864  (0.0481901); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 4310.08
//
Query:       KHJ30839.1  [L=408]
Description: putative cysteine synthase 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-61  206.3   0.0    7.7e-61  206.1   0.0    1.0  1  PALP      Pyridoxal-phosphate dependent enzyme


Domain annotation for each model (and alignments):
>> PALP  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.1   0.0   4.3e-65   7.7e-61       2     294 .]      33     351 ..      32     351 .. 0.88

  Alignments for each domain:
  == domain 1  score: 206.1 bits;  conditional E-value: 4.3e-65
                 GGCSSS--EEEECCTCCCCCCEEEEEEGGGS.TTSBTTHHHHHHHHHH.HHTT.....TTTSEEEEEBSSHHHHHHHHHHHHHT-EEEEEEETTS-HHH CS
        PALP   2 tlgigpTPlvrlprlskelgvplflKlEsln.ptgSfKdRgaeyllar.lkeg.....tgaktvveassGNhgralAaaaallGlkvtivvpadaspek 93 
                 ++ ig+TP+ ++++ls+++g+ +f+K E+ln  +gS KdR a +++ + +  +      +++t+ e++ G +g++lA  a++lG+k++i++p+d s+ek
  KHJ30839.1  33 EGIIGDTPIFKIKSLSEATGCLIFAKAEFLNgAGGSPKDRVALNIIRTaE-AQgflspGRGDTIYEGTVGSTGISLASLARALGYKAHICMPSDQSKEK 130
                 6789***************************66***************73.33366666**************************************** PP

                 HHHHHHTT-EEEEECCHHHHHHHHHHHHHHH..........STTCEE--TTTSHHHHHH.HHTHHHHHHHHTTTTEEEEEEE-SSSHHHHHHHHHHHH. CS
        PALP  94 vallrllGaevvevggdydeavaaaaelaae..........gegaylvsqfdnptvieg.ygtiglEileqlggkpdavvvpvGgGgliaGiaaglke. 180
                  + l++lGa+v++v   + ++ ++  +la++          +   ++++qf+n++++ +  + +g+Ei+ q+gg +da+v ++G+Gg+i+G+a +lk+ 
  KHJ30839.1 131 EDILKCLGARVERVTPAPITSDEHFVNLAKRraiyhtqdnfESRGFFADQFENSANFNAhFSNTGPEIWNQTGGHIDAFVTGAGTGGTISGVALYLKQk 229
                 **************5555555555455555556666778899999*****************************************************7 PP

                 ..HSTT-EEEEEEECTTCGGTTCCS..S.SS..B..........SSS.CCSTCSCGTTCCHHHHSEEEEEEEEEEHHHHHHHHHHHHHHHSB-B-HHHH CS
        PALP 181 ..rrpdvrvigvepegsdalarslragrrvtvpvs.........dtiadglavgspselafelldrlvdeivtvsdeealeamrllarregivvepssa 268
                    + + rv+ ++pegs   ++    g   + +++         dti++g++++   + +fe+  +l+d+ v vsd +a++++++l +++gi+v+ ssa
  KHJ30839.1 230 mgLGKNLRVVLADPEGSGLHNKVK-YGVMFSNSEKegtrrrnqvDTIVEGVGIN-RLTNNFEAGMELIDDSVKVSDLQAMKMAKWLVENDGIFVGSSSA 326
                 766666*********877777666.5555444444555666666**********.9999999999********************************** PP

                 HHHHHHHHHHHHCCTTCEEEEEEE-B CS
        PALP 269 aalaalklreagelkegdrvvviltg 294
                  +  a+  + a ++++++r+v+il++
  KHJ30839.1 327 LNCVAA-VVVALKMPKNSRIVTILCD 351
                 ******.*****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3009.64
//
Query:       KHJ30840.1  [L=392]
Description: putative mucin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2941.33
//
Query:       KHJ30841.1  [L=189]
Description: putative suppressor protein srp40 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       982  (0.0547716); expected 358.6 (0.02)
Passed bias filter:                      243  (0.0135535); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1348.03
//
Query:       KHJ30842.1  [L=642]
Description: putative electron transfer flavoprotein-ubiquinone oxidoreductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.6e-47  157.9   0.3    1.1e-46  157.2   0.3    1.4  1  ETF_QO          Electron transfer flavoprotein-ubiquinone oxi
    2.6e-08   33.9   0.0    3.8e-05   23.4   0.0    2.3  2  DAO             FAD dependent oxidoreductase
      3e-08   33.8   0.0    9.7e-08   32.1   0.0    1.9  1  NAD_binding_8   NAD(P)-binding Rossmann-like domain
    4.8e-06   25.9   0.1     0.0037   16.4   0.7    2.1  2  FAD_binding_2   FAD binding domain
    3.7e-05   23.1   0.0    0.00012   21.5   0.0    1.7  2  Pyr_redox_2     Pyridine nucleotide-disulphide oxidoreductase
      8e-05   23.1   0.1       0.28   11.8   0.0    2.8  2  Pyr_redox       Pyridine nucleotide-disulphide oxidoreductase
    0.00021   20.1   0.3    0.00037   19.3   0.3    1.3  1  HI0933_like     HI0933-like protein
    0.00061   19.1   0.0     0.0023   17.2   0.1    1.7  2  Thi4            Thi4 family
    0.00094   19.2   0.1     0.0031   17.5   0.1    1.8  2  NAD_binding_9   FAD-NAD(P)-binding
      0.001   18.4   0.2     0.0016   17.8   0.2    1.2  1  FAD_binding_3   FAD binding domain
     0.0012   18.3   0.0     0.0017   17.8   0.0    1.3  1  FAD_oxidored    FAD dependent oxidoreductase
     0.0065   15.4   0.0       0.13   11.1   0.1    2.1  2  Trp_halogenase  Tryptophan halogenase
     0.0099   15.2   0.1      0.015   14.5   0.1    1.2  1  Pyr_redox_3     Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.018   14.1   0.2      0.029   13.4   0.2    1.3  1  Lycopene_cycl   Lycopene cyclase protein
      0.048   13.0   0.0      0.077   12.3   0.0    1.2  1  AlaDh_PNT_C     Alanine dehydrogenase/PNT, C-terminal domain
      0.084   13.0   0.4       0.24   11.6   0.4    1.8  1  Fer4_2          4Fe-4S binding domain
       0.11   11.5   0.1       0.18   10.8   0.1    1.3  1  GIDA            Glucose inhibited division protein A
       0.12   13.0   0.5       0.33   11.6   0.5    1.8  1  Fer4_7          4Fe-4S dicluster domain


Domain annotation for each model (and alignments):
>> ETF_QO  Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.2   0.3   1.1e-49   1.1e-46       1     103 [.     536     639 ..     536     640 .. 0.98

  Alignments for each domain:
  == domain 1  score: 157.2 bits;  conditional E-value: 1.1e-49
                 SSSS--HHHHHHTTT-B--SSS--SEEESSTTHHHHTHHHHHS-THHHH-TTS-EEEEETT.TTSSEEEEE-CCC--S--HHHHH-TT--EEE---STT CS
      ETF_QO   1 gkltfdklssvflsgtnheedqpvhLklkdaevavkvnlekyagpeqryCPagvyeivede.eakekklqinaqnCvhCktCdikdpsqniewvvPeGg 98 
                 +k++fd+l+sv+++gtnheedqpvhL++kd + ++ ++++ky+g+e+r+CPagvye+v+de ++ + ++qin+qnC+hCktCdik p+q+i+w++P+Gg
  KHJ30842.1 536 DKISFDILTSVSRTGTNHEEDQPVHLQVKDLDEHTLTSWPKYKGIESRFCPAGVYEYVNDEtKELGLRFQINSQNCIHCKTCDIKVPDQDINWQTPQGG 634
                 589********************************************************9978899********************************* PP

                 -C--- CS
      ETF_QO  99 gGPky 103
                 +GPky
  KHJ30842.1 635 EGPKY 639
                 ****9 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   3.8e-08   3.8e-05       1      41 [.      97     144 ..      97     163 .. 0.79
   2 !    8.2   0.0    0.0017       1.7     146     189 ..     207     251 ..     197     350 .. 0.75

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 3.8e-08
                 EEEEECTSHHHHHHHHHHHHT....T.....EEEEESSSSTTSSGGGSSE CS
         DAO   1 dvviiGGGiiGlstAyeLarr....g.....VtllekgdiagsgaSgrns 41 
                 dv+i+GGG +Gls+A  L +     g     V+llek++++g  a   ++
  KHJ30842.1  97 DVCIVGGGPAGLSAAIRLKQLankaGnedfrVVLLEKASELG--AHILSG 144
                 9*****************43233345899*********9887..555444 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0017
                 HHHHHHHHHHHHHTT-EEEESECEEEE.EEEETCEEEEEEECT.EE CS
         DAO 146 akltaalaraaealGveilegtevtgl.eeedgkvwgverttp.ge 189
                   ++++l ++ae+lGvei+ g  + ++  +edg v+g+  t++ g+
  KHJ30842.1 207 NNFVKWLGERAEELGVEIYPGFSASEIlYNEDGSVKGI-ATNDlGI 251
                 679**********************9745677999999.6555665 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.0   9.8e-11   9.7e-08       1      51 [.     100     159 ..     100     169 .. 0.79

  Alignments for each domain:
  == domain 1  score: 32.1 bits;  conditional E-value: 9.8e-11
                    EE--SHHHHHHHHHHHC.......CTEEEEEE-SSSSSSGGG-EECE..TTCEECTS--- CS
  NAD_binding_8   1 IvGaGlsGlvaAylLak.......agfdvlllekrdrlGGraasyev..pgvrvdygahi 51 
                    IvG+G +Gl+aA +L++       ++f+v+llek++ lG ++ s  v  p  + d+ + +
     KHJ30842.1 100 IVGGGPAGLSAAIRLKQlankagnEDFRVVLLEKASELGAHILSGAViePSAINDLLPDW 159
                    9**************976555443499****************99886555555555555 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.7   3.7e-06    0.0037       1      37 [.      97     140 ..      97     147 .. 0.72
   2 !    6.8   0.0    0.0031       3.1     135     210 ..     201     286 ..     190     312 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 3.7e-06
                    SEEEE--SHHHHHHHHHHHH....TTT...-EEEEESSSGGGSG CS
  FAD_binding_2   1 DviViGsGlAGLaAAleaae....aGl...kvavvekeqefgga 37 
                    Dv ++G+G AGL+AA+++++    aG    +v+++ek++e g +
     KHJ30842.1  97 DVCIVGGGPAGLSAAIRLKQlankAGNedfRVVLLEKASELGAH 140
                    99**************9875322233222378888888876665 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0031
                    ....HHHHHHHHHHHHHHTCTEEEEESEEEEEEEE.CTTEEEEEEEEET..........TTTCEE....EEEESEEEE-----GG...... CS
  FAD_binding_2 135 etlvtghallarlvesarkagvdfqerteadeLiv.edgrvtGavvenp..........esgrev....rirakavvlatgGfgrallkel 210
                    + +++ ++ ++ l e+a+++gv++++  +a e+++ edg v G+  +++          +    +    +++ + ++ a+g  g  l k+l
     KHJ30842.1 201 NYIISLNNFVKWLGERAEELGVEIYPGFSASEILYnEDGSVKGIATNDLgisklgqpkdN----FekgmEFHTRMTLFAEGCHGS-LTKQL 286
                    56777888899999********************96689****99998899999855442....344558999999999998884.44443 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   1.2e-07   0.00012       2      31 ..      97     137 ..      96     184 .. 0.77
   2 ?   -1.9   0.0       1.5   1.5e+03     187     217 ..     211     242 ..     206     251 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 1.2e-07
                  SEEEE--SHHHHHHHHHHHH.......HTS-EEEEE....T CS
                  xxxxxxxxxxxxxxxxxxxx.......xxxxxxxxx....x RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaq.......agakvtlve....l 31 
                  dv+++GgGpAGl+aa++l+q         ++v+l+e    l
   KHJ30842.1  97 DVCIVGGGPAGLSAAIRLKQlankagnEDFRVVLLEkaseL 137
                  8*******************998877668888888644433 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.5
                  HHHHHHHHHTTEEEEESCEEEEEEETTE.EEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxx RF
  Pyr_redox_2 187 aaleealekeGvevklgtsvkeidgnge.kle 217
                  ++l e+ e+ Gve++ g s+ ei  n++ +++
   KHJ30842.1 211 KWLGERAEELGVEIYPGFSASEILYNEDgSVK 242
                  7888999*************999999886666 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.1    0.0039       3.8       2      24 ..      98     120 ..      97     148 .. 0.83
   2 !   11.8   0.0   0.00028      0.28      43      78 ..     210     246 ..     207     250 .. 0.92

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0039
                 EEEECSSHHHHHHHHHHHHTTSE CS
   Pyr_redox   2 vvvvGgGyiglElAgalaelgkk 24 
                 v +vGgG  gl +A  l++l++k
  KHJ30842.1  98 VCIVGGGPAGLSAAIRLKQLANK 120
                 78***************999964 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00028
                 HHHHHHHHHHTTEEEECSEEEEEEEEETTS.EEEEEE CS
   Pyr_redox  43 skilqeklekngievllntkveeiegsedg.vesvkl 78 
                  k+l e+ e++g+e++ + ++ ei  +edg v+++ +
  KHJ30842.1 210 VKWLGERAEELGVEIYPGFSASEILYNEDGsVKGIAT 246
                 6899**************************9999977 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.3   3.7e-07   0.00037       2      40 ..      97     142 ..      96     145 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 3.7e-07
                  SEEEE--SHHHHHHHHHH.......HHTT--EEEE-SSSSS-HHHH CS
  HI0933_like   2 dviviGgGaAGlmaAisa.......akrgkrVlllekakklgrKil 40 
                  dv ++GgG+AGl aAi++       ++++ rV+lleka++lg  il
   KHJ30842.1  97 DVCIVGGGPAGLSAAIRLkqlankaGNEDFRVVLLEKASELGAHIL 142
                  89*************9875554333556779***********9886 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.1   2.3e-06    0.0023      18      60 ..      96     144 ..      90     154 .. 0.76
   2 ?   -1.4   0.0       1.2   1.2e+03     111     145 ..     220     254 ..     198     308 .. 0.70

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2.3e-06
                 EEEEEE--SHHHHHHHHHH...HHC...TTS-EEEEESSSS--TTTTTT CS
        Thi4  18 sDvvivGaGssGLtaayyl...akk...pdlkvailersvspGGGawlG 60 
                  Dv ivG+G++GL+aa  l   a+k    d++v++le+   +G  +  G
  KHJ30842.1  96 VDVCIVGGGPAGLSAAIRLkqlANKagnEDFRVVLLEKASELGAHILSG 144
                 69**************76522255444479*******988777655554 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.2
                 TTEEEEESEEEEEEEEETBTEEEEEEEEEHHHHTC CS
        Thi4 111 anvkllnavaveDlivregegvaGvvinwtlvela 145
                  +v ++ + ++ +++  e+ +v+G+ +n   +++ 
  KHJ30842.1 220 LGVEIYPGFSASEILYNEDGSVKGIATNDLGISKL 254
                 57889999999999999999999*99998888765 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.1   3.1e-06    0.0031       1      39 [.      99     139 ..      99     151 .. 0.85
   2 ?   -2.1   0.0       3.4   3.4e+03      66      78 ..     197     218 ..     159     229 .. 0.66

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 3.1e-06
  NAD_binding_9   1 aivGaGprGlavlerLlara..kkkspleitlfdp.sepgag 39 
                    +ivG+Gp+Gl+++ rL + a  +  +++++ l ++ se+g  
     KHJ30842.1  99 CIVGGGPAGLSAAIRLKQLAnkAGNEDFRVVLLEKaSELG-A 139
                    59**************99997667788********66667.3 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 3.4
  NAD_binding_9  66 p.........ptfaeWlrerga 78 
                    +         ++f++Wl er++
     KHJ30842.1 197 NnhgnyiislNNFVKWLGERAE 218
                    2566666667899999999984 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.2   1.6e-06    0.0016       2      33 ..      96     134 ..      95     148 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.6e-06
                    EEEEEE--SHHHHHHHHHHHHTTHH.......EEEEESS CS
  FAD_binding_3   2 tdVlIVGaGpaGlmlallLseaGvr.......vvlvekr 33 
                    +dV+IVG+GpaGl++a  L++   +       vvl+ek 
     KHJ30842.1  96 VDVCIVGGGPAGLSAAIRLKQLANKagnedfrVVLLEKA 134
                    79**************99987522244446666666665 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.7e-06    0.0017       1      43 [.      97     146 ..      97     248 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.7e-06
  FAD_oxidored   1 DvvVvGGgpaGvaAAia.......AaraGakvlLveergvlGGlltsglv 43 
                   Dv++vGGgpaG+ AAi        A +++ +v+L+e+   lG    sg+v
    KHJ30842.1  97 DVCIVGGGPAGLSAAIRlkqlankAGNEDFRVVLLEKASELGAHILSGAV 146
                   9***************644442224455559*******999977777666 PP

>> Trp_halogenase  Tryptophan halogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.1   0.00013      0.13       1      34 [.      97     134 ..      97     181 .. 0.82
   2 ?    2.2   0.0     0.063        62     142     216 ..     195     285 ..     144     297 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00013
                     EEEEE--SHHHHHHHHHHHHHTTTS....SEEEEEE-S CS
  Trp_halogenase   1 kivivGGGtaGwlaAaalakalkgk....levtlvese 34 
                     ++ ivGGG+aG  aA+ l++  ++     ++v l+e++
      KHJ30842.1  97 DVCIVGGGPAGLSAAIRLKQLANKAgnedFRVVLLEKA 134
                     589*************9986554322224999999975 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.063
                     -B-S--EEEE-HHHHHHHHHHHHHHCT-EEEE--EEEEEE-T.TS-EEEEEETT...............S-EEE-SEEEE-SGGG-IIIII CS
  Trp_halogenase 142 lsalsyAyhldaalyakfLrrvaearGvtrvegkvvevqlde.dgrveslrled...............greveadlfiDcsGfrgllieq 216
                     + + +  y +  +++ k+L + ae+ Gv++  g +++  l + dg+v+++ ++d               g e+  ++ + + G  g l +q
      KHJ30842.1 195 QMNNHGNYIISLNNFVKWLGERAEELGVEIYPGFSASEILYNeDGSVKGIATNDlgisklgqpkdnfekGMEFHTRMTLFAEGCHGSLTKQ 285
                     44445567788889*******************9987776666*******99987666666666666666666666666666666666555 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.1   1.5e-05     0.015       2      21 ..     100     119 ..      99     142 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.5e-05
  Pyr_redox_3   2 IiGaGPaGlaaaielkkagl 21 
                  I+G+GPaGl+aai lk++  
   KHJ30842.1 100 IVGGGPAGLSAAIRLKQLAN 119
                  9**************98754 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   2.9e-05     0.029       1      34 [.      97     135 ..      97     141 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.9e-05
  Lycopene_cycl   1 DvvviGaGpAglslAarl.....teakpglkvvlieasp 34 
                    Dv ++G+GpAgls A rl      + + + +vvl+e + 
     KHJ30842.1  97 DVCIVGGGPAGLSAAIRLkqlanKAGNEDFRVVLLEKAS 135
                    9****************9776555566788899988665 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   7.7e-05     0.077      30      85 ..      97     152 ..      92     166 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 7.7e-05
                  EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTCECEEHCHHHHHH CS
  AlaDh_PNT_C  30 kvlviGgGvaGlqAiatakglgakVtvlDvrparleqleslgakfvevlksqeell 85 
                   v ++GgG aGl+A+   k+l  k    D r   le+ ++lga++++    + +++
   KHJ30842.1  97 DVCIVGGGPAGLSAAIRLKQLANKAGNEDFRVVLLEKASELGAHILSGAVIEPSAI 152
                  699***************************************99777665555555 PP

>> Fer4_2  4Fe-4S binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.4   0.00025      0.24       2      16 ..     603     617 ..     602     620 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00025
      Fer4_2   2 pvvvdtdrCigCgaC 16 
                 ++++++++Ci+C++C
  KHJ30842.1 603 RFQINSQNCIHCKTC 617
                 689************ PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   0.00018      0.18       1      22 [.      97     118 ..      97     132 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00018
                 CEEEE-SSHHHHHHHHHHHHTT CS
        GIDA   1 dviViGgGhAGceAAlaaarlG 22 
                 dv ++GgG AG+ AA+ +++l 
  KHJ30842.1  97 DVCIVGGGPAGLSAAIRLKQLA 118
                 79**************999875 PP

>> Fer4_7  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.5   0.00033      0.33      11      44 ..     584     617 ..     582     620 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00033
      Fer4_7  11 aCpvkaieldeeenekgtekveidpekClgCgaC 44 
                  Cp+++ e+ ++e ++   + +i++++C++C+ C
  KHJ30842.1 584 FCPAGVYEYVNDETKELGLRFQINSQNCIHCKTC 617
                 7*******9999888877999************* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (642 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       484  (0.0269954); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.66u 0.30s 00:00:00.96 Elapsed: 00:00:00.47
# Mc/sec: 4074.70
//
Query:       KHJ30843.1  [L=379]
Description: putative glycoside hydrolase family 61 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.1e-50  170.0   0.2    1.2e-49  169.0   0.0    1.5  2  Glyco_hydro_61  Glycosyl hydrolase family 61


Domain annotation for each model (and alignments):
>> Glyco_hydro_61  Glycosyl hydrolase family 61
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.0   0.0   6.9e-54   1.2e-49       1     198 [.      22     231 ..      22     237 .. 0.89
   2 ?   -3.0   0.2      0.32   5.8e+03      96     119 ..     272     294 ..     267     311 .. 0.63

  Alignments for each domain:
  == domain 1  score: 169.0 bits;  conditional E-value: 6.9e-54
                     XEEEEEEEETTEEEE--TSSSB-B-.--SSS--BGGTTSCHHCCS..TTB.--SSBEEEETTSEEEEEEES........SC-TT--S-EEEEEEE CS
  Glyco_hydro_61   1 Hgvvksltvngkeyegdpevvrwsr.kakdngpvtdvtspdiaCn..kag.paaavaevkaGdtvtfewke........kwissHkGpvlvYlak 83 
                     H+ +++l vn++++ gd++++r+++ +++++ pvtd+++++++C+  + + p++ v++v+  +++ fe++         ++  sHkGp++vY++ 
      KHJ30843.1  22 HSLFTNLHVNNVDQ-GDGTCIRTPKnPSTATYPVTDLQDNSMVCGydG-TtPVNRVCSVPKASQLGFEYRLipddssagSVEPSHKGPCSVYMKA 114
                     999**********6.99*******98888899*************743.35999888************98888776543669************ PP

                     -SSS-GTTT--GGGCEEEEEEEE-EETE-STEHHHHHCCTTCEEEEE--TTB-SEEEEEEEEEEE-TTTTSTT.--EEEEEEEEEEEESS-SB.- CS
  Glyco_hydro_61  84 casgddcktvdgsglkWfKideegldasakkWatdklaengaklsvtiPaslapGeYllRhEiiALhsagskg.gaQfYpsCaqleVtgsgtalp 177
                     ++   + ++++g+g+ WfKi++eg+d++a+kW++dk++en+  +++++P++la G+Yl+R E++AL++a++++ ++QfY++Caq+    + +++p
      KHJ30843.1 115 VT---SPSEISGEGEGWFKIWDEGFDTNAGKWCSDKIIENNGIMNINLPPDLAGGNYLVRSELLALQEADKSPpQPQFYIGCAQIFLDSDEKSAP 206
                     *4...46899999999***********9999******99999***************************98877**************9877567 PP

                     ..-..EEGCCSS-TTSTTTSS-TTT CS
  Glyco_hydro_61 178 ..e..vsfpgaykasdpgilvniye 198
                       +  vs+pg+++ +dp++++niy 
      KHJ30843.1 207 raDttVSIPGHVQITDPSVHFNIYL 231
                     54157******************85 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.32
                     GGCEEEEEEEE-EETE-STEHHHH CS
  Glyco_hydro_61  96 sglkWfKideegldasakkWatdk 119
                     +g +W   ++e++d++++ W +++
      KHJ30843.1 272 NG-NWWGTEQEAYDSESGCWNATS 294
                     34.588888888887666684443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2851.60
//
Query:       KHJ30844.1  [L=222]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.24    9.9  11.3       0.29    9.6  11.3    1.0  1  KAR9      Yeast cortical protein KAR9


Domain annotation for each model (and alignments):
>> KAR9  Yeast cortical protein KAR9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6  11.3   1.6e-05      0.29     449     601 ..      52     206 ..      33     218 .. 0.60

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 1.6e-05
        KAR9 449 rrkssvdlgslaerviasklkreSklPqiastleqtkrkskipkasskkslllstpsktatsesptpasrkesrispppknrPrwnastntsDlevGhn 547
                  r++ + ++ +  r++ sk+  ++ lP++    + +k++s +p+++         p+k     +p++  + ++  +p+  ++Pr  ++t++s ++v  n
  KHJ30844.1  52 TREEATAFQVY-LRQAISKFAAHNSLPTPIPPKSFHKKQSVVPNPKL--------PNKPIEMATPIMIPTSTAIHDPTHVTQPREISTTQSSWAMVRRN 141
                 34444445755.6778999*********9998877999999999954........5566666677666555554555555******************* PP

        KAR9 548 fkpltlttpsapapsrssrssstlppvsPlerkkskspsPta..............Rsvsrvsarras 601
                 ++++  +++ + +++++ +++++ +    l++++++s sP +              + +s+vs++ +s
  KHJ30844.1 142 GQKKAHVKKDNNTKQTQGKKANHAE---RLNEPRASSNSPRTqalegkstppgnavKESSSVSRKSMS 206
                 *999999999844444444422222...2222222222221111111111111122334445544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1065  (0.059401); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 1617.29
//
Query:       KHJ30845.1  [L=89]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       610  (0.0340231); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 679.98
//
Query:       KHJ30846.1  [L=473]
Description: putative mitochondrial fusion protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-14   54.2   4.1      0.002   18.0   0.0    5.0  3  Mito_carr        Mitochondrial carrier protein
  ------ inclusion threshold ------
      0.016   14.7   1.8      0.066   12.6   0.1    2.0  2  ZYG-11_interact  Interactor of ZYG-11


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   4.2e-07    0.0038      18      76 ..      84     218 ..      80     236 .. 0.75
   2 !   18.0   0.0   2.2e-07     0.002       6      46 ..     256     296 ..     251     317 .. 0.84
   3 !   12.1   0.3   1.6e-05      0.14      14      83 ..     354     462 ..     346     465 .. 0.64

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 4.2e-07
                 HHHHHHHHHHHHHHHHHH.........................................................................CCCSSTTT CS
   Mito_carr  18 vatlvttPldvvKtrlqt.........................................................................qkksskks 43 
                 +++l+++P+dv+Kt lq+                                                                         +       
  KHJ30846.1  84 ITVLLAQPFDVAKTILQVkyqgsdqeilpvhgtldlpqeednkesyqsddsdpeeptyftsstihsraerirrerqmymsppalplptpkeN------- 175
                 7899**************99999999999999999999888777777777777777777766666666666666666666666665544440....... PP

                 SCSS.............HHHHHHHHHHHHHHHGGGTTHHHHHHHHH CS
   Mito_carr  44 ksaa.............ildvlkkiykeeGlrglyrGllpnllrva 76 
                    +             il+vl+  + +eG rg ++  +++++  +
  KHJ30846.1 176 ---SipayqlklkssdsILEVLGAEWTKEGTRGIWKASNVSFIYGI 218
                 ...04444455555666******************99888877665 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 2.2e-07
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCS CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksa 46 
                 + +l+++++++++++++ +Pld+++t+l + ++s+k++   
  KHJ30846.1 256 WMSLAVSAASAVISGIILAPLDLIRTKLILTPTSHKNRSVM 296
                 778999***************************99987644 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 1.6e-05
                 HHHHHHHHHHHHHHHHHHHHHH........CCCSSTTTSCSS..............HHHHHHHHH.......................HHHHHHGGGTT CS
   Mito_carr  14 lagavatlvttPldvvKtrlqt........qkksskksksaa..............ildvlkkiy.......................keeGlrglyrG 67 
                 la  ++ ++  Pl++v  r q+        +++++k+ +  +              i   +++++                       k +Gl+gl+rG
  KHJ30846.1 354 LARFLELFLKLPLETVLRRAQMnllkrafnNSTENKN-E--QdsmlttvrlgeyrgI---IGTMWlivreegvtvpksynqkssskpsKGQGLAGLWRG 446
                 6777888888899999999998777766642222222.2..1335777777774442...33333334444444444444444555558899999**** PP

                 HHHHHHHHHHHHHHHH CS
   Mito_carr  68 llpnllrvapasalkf 83 
                 + +++ + +  ++l++
  KHJ30846.1 447 WRVSIWGLVGVWGLRV 462
                 ******9998888765 PP

>> ZYG-11_interact  Interactor of ZYG-11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   7.4e-06     0.066      70     128 ..     218     276 ..     197     283 .. 0.91
   2 ?    1.2   0.2     0.023   2.1e+02     107     129 ..     319     343 ..     306     353 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 7.4e-06
  ZYG-11_interact  70 ifsqkskdslnelvnalvdlsppeklssksiveiFalssilLlvaslssliGgYilaPv 128
                      i ++++++ ++ +++++ ++  p  +s++ i     +s + L+v++ s++i g ilaP+
       KHJ30846.1 218 ILTETFENWTQSFISVILNIPEPGLSSGFGIAAETPFSWMSLAVSAASAVISGIILAPL 276
                      46899***************************9999**********************6 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.023
  ZYG-11_interact 107 ssil.LlvaslssliGgYi.laPvf 129
                      s ++ ++  s+s l+G+Y+ + Pv+
       KHJ30846.1 319 SLVTpIVLNSISLLLGSYLsIDPVL 343
                      5554246689********9445766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (473 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 3634.81
//
Query:       KHJ30847.1  [L=338]
Description: putative pyrroline-5-carboxylate reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-19   69.4   0.1    1.1e-18   67.4   0.1    1.9  2  P5CR_dimer      Pyrroline-5-carboxylate reductase dimerisatio
    6.3e-09   36.3   0.0    2.4e-08   34.4   0.0    2.1  1  F420_oxidored   NADP oxidoreductase coenzyme F420-dependent
  ------ inclusion threshold ------
      0.094   12.4   0.1          2    8.2   0.0    2.4  2  DBD_Tnp_Hermes  Hermes transposase DNA-binding domain


Domain annotation for each model (and alignments):
>> P5CR_dimer  Pyrroline-5-carboxylate reductase dimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.42   2.5e+03      31      53 ..     115     137 ..     101     157 .. 0.64
   2 !   67.4   0.1   1.8e-22   1.1e-18       2     102 ..     223     324 ..     222     325 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.42
                 HTT--HHHHHHHHHHHHHHHHHH CS
  P5CR_dimer  31 klGlsreeArelaaqtvaGaakl 53 
                 + G+  + A +l++ ++ G+ + 
  KHJ30847.1 115 QRGVRDALAGKLVISVIGGTPQK 137
                 35888999999999999888774 PP

  == domain 2  score: 67.4 bits;  conditional E-value: 1.8e-22
                 CHHHHHHHHTTTHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHCHS.HHHHHHHH--TTSHHHHHHHHHHHTTHHHHHHHHHHHHHHH CS
  P5CR_dimer   2 kqldavtalsGsgpAyvflliealadagvklGlsreeArelaaqtvaGaaklllese.paelrdkvtspgGtTiaglkeleegglraavieaveaaakr 99 
                 + +d+   ls+++ A + ++++ + d++v +Gl r++A+e++ q+++ +a+ll+++  pa lr+ ++ p+GtTiagl++lee++ r a+ +a   + +r
  KHJ30847.1 223 ETFDIGGILSAASGALLSVALDGILDGAVSQGLARSQAKEIVSQSLISLATLLENGAhPAILREDFSIPQGTTIAGLMSLEEDRARWAFSKATIVSSER 321
                 57899999********************************************997778************************************99999 PP

                 HHH CS
  P5CR_dimer 100 ske 102
                 sk+
  KHJ30847.1 322 SKN 324
                 986 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.0   4.1e-12   2.4e-08       3      95 ..      25     131 ..      23     133 .. 0.84

  Alignments for each domain:
  == domain 1  score: 34.4 bits;  conditional E-value: 4.1e-12
                    EEETTSHHHHHHHHHHHHTTS....-GGCEE....EEEESSCCCHHHHHHHHC.....-EEECECHHHHHHH-SEEEE-S-HHHHHHHHHHC.GHH CS
  F420_oxidored   3 giiGaGnmgealasgllaaga....qpheiv....vansrnpekaeelaeelg.....vkvtavdneeaaeeadvvvlavkpedveevlsel.akd 84 
                     +iG+G +g al+ ++++a +    +  +++    +a+ + +e++  l ++++      +v  ++n   ++ advv+la+kp++ve +ls+   +d
     KHJ30847.1  25 TVIGCGTIGTALLGRIMEACErakdKGDDVIfnrfFATVNGEESRYNLLNRFStyqshFRVYCGENDLWMDTADVVILAFKPSMVEHILSQRgVRD 120
                    79**************9987777655566762222377788888888888887999**7777779**************************98899 PP

                    HHTTSEEEEES CS
  F420_oxidored  85 alkgklvisvl 95 
                    al+gklvisv 
     KHJ30847.1 121 ALAGKLVISVI 131
                    *********96 PP

>> DBD_Tnp_Hermes  Hermes transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.033     2e+02      46      62 ..     177     193 ..     172     200 .. 0.80
   2 ?    8.2   0.0   0.00033         2      14      37 ..     200     223 ..     193     227 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.033
                     HHHHHHHH-S-B-HHHH CS
  DBD_Tnp_Hermes  46 flkigavYGeqvdvedL 62 
                      ++i a+YG+ + v + 
      KHJ30847.1 177 MMNIAAEYGQSITVIET 193
                     689*******9998665 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00033
                     HHHHHHHHHHHHHTT--GGGGG-H CS
  DBD_Tnp_Hermes  14 keaiekctqWvvrDcrpfsavtGa 37 
                     +   ek+tqW+ + c   s v+  
      KHJ30847.1 200 NSGYEKITQWIFEQCGKISFVSPE 223
                     66679************9999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 2705.23
//
Query:       KHJ30848.1  [L=527]
Description: putative h3 k56 histone acetylation protein kat11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-92  310.2   0.9    2.7e-92  309.8   0.9    1.1  1  HAT_KAT11  Histone acetylation protein


Domain annotation for each model (and alignments):
>> HAT_KAT11  Histone acetylation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  309.8   0.9   1.5e-96   2.7e-92       1     342 [.       6     370 ..       6     379 .. 0.85

  Alignments for each domain:
  == domain 1  score: 309.8 bits;  conditional E-value: 1.5e-96
   HAT_KAT11   1 LnelLakvlpkdekfkirhlsskpkevealivakkkeaeskpektykekhflalsendd........keviifglevlvYitvfdeanerliFVSkaDs 91 
                 L e L+ +lpkd+ fk+++ls+ ++ +++l+   +++   +++kt ++khfl+l  + +        kevi+++lev++Y t    a++ +iFVSkaDs
  KHJ30848.1   6 LLENLETNLPKDVTFKVYYLSTFENIASSLYRKIPGQ---QDDKTSCTKHFLVLTVKLPfndnkdhnKEVIVYALEVYIYST----AQNITIFVSKADS 97 
                 568899********************99999999898...8899**********99988888999*****************....99*********** PP

   HAT_KAT11  92 tgylkll......kvkvadivetllsylisikqreylrkvklsLFtraqdqYLFPnssknpkKHvLddkgLlkWWikvldkilresakssa.tkaklvi 183
                 tgyl++l       ++++++++t+l+yli+  qr++ + + +sLF+raqdqYLFP s++ p KHv +d+gL++WW++vl++i+++s++ s+  k +++i
  KHJ30848.1  98 TGYLDTLkltksiPSPIRTVSTTFLQYLITKYQRPGYKTI-VSLFARAQDQYLFPRSVEYPGKHVQHDSGLIRWWCRVLNPIVETSQTDSKtAKGYILI 195
                 ******99***999*************************9.******************************************9777766668****** PP

   HAT_KAT11 184 pGkdkletrkfipataksdnWlvghileeisddk....avyeiPlFpDDPKgrfleelieE........grlksv.sldqfweelafrqEfslgrlvgf 269
                 pG dk et +f+p++ + + W+vgh+l ei +      ++y iP+FpDDPK+rfl+el+ E        g+++s+ +ldqfwe++afrqE+s+grlvgf
  KHJ30848.1 196 PGLDKNETLSFVPNKVD-NLWTVGHPLLEITTLVgtvaPRYLIPHFPDDPKARFLDELDGElikcgdsnGHWRSIkTLDQFWEMMAFRQECSAGRLVGF 293
                 ****************9.78***********9778889************************************************************* PP

   HAT_KAT11 270 igleveet...veeddvikp...kklvkskkqyksikskikkeeydkeesaeelvqnlssellesmekkk.lksirgsrs 342
                 i++  + +   v++ +  ++   +klv+   +++++ +     +     ++ +++q+ls++l+++ +++k l++ + +++
  KHJ30848.1 294 IWIVISPKqyyVQNRSANNSteaPKLVND--NKQEFNND-GPPKLYPHCKSLKNIQTLSPHLMNRTDTEKkLEQSSVNHQ 370
                 **944333445333332333222333333..33334333.4455555566666778888888888888774444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (527 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       788  (0.0439511); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.39
# Mc/sec: 4094.35
//
Query:       KHJ30849.1  [L=271]
Description: putative glc8 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-24   85.6  10.2    4.8e-24   85.6  10.2    1.9  2  IPP-2     Protein phosphatase inhibitor 2 (IPP-2)


Domain annotation for each model (and alignments):
>> IPP-2  Protein phosphatase inhibitor 2 (IPP-2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.2      0.13   2.4e+03      53      74 ..      50      70 ..      26     100 .. 0.48
   2 !   85.6  10.2   2.7e-28   4.8e-24       1     132 [.     103     254 ..     103     259 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.13
       IPP-2 53 eldaeslaekleaaaessekks 74
                ++ +esla+++   +++ ++  
  KHJ30849.1 50 NIGEESLAKDI-THQNTLQNAG 70
                45555665555.1122111111 PP

  == domain 2  score: 85.6 bits;  conditional E-value: 2.7e-28
       IPP-2   1 vkWDEmnilatnhpadkdygtmkIdEPkTPYhrmvdedddede..........................asdeeekeaeldaeslaekleaaaessekk 73 
                 +kWDE+n l+ ++  +++++tmkIdEPkTPY++++d+ +de+e                          +++ +++e+e++  sl+e++ea + s++ +
  KHJ30849.1 103 LKWDEAN-LYLTE--QERTSTMKIDEPKTPYAKQYDPAEDEEEirflnengsldsdeimsddldnsisvKKNFRTREEEIPGLSLGEPEEALPISDNLE 198
                 59*****.66666..45669***************9999777767776666666677777777777774444444444888888888887777777776 PP

       IPP-2  74 ssseeeeeaeseeeeeedlseeeeeekrreFeekRKaHYnefkavkllkeeleeeedee 132
                 ++ +++   + + +e   lse ee+ek+r+Fee+RK HY+ +k+++++  +le+e+d+e
  KHJ30849.1 199 CKVKKK-AVHVTADEYIGLSE-EEQEKHRKFEEMRKRHYE-MKNIANVLGNLEQEDDDE 254
                 665444.33445688888998.8899*************9.999998888888777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       892  (0.0497518); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.21s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 2203.15
//
Query:       KHJ30850.1  [L=423]
Description: putative ferrochelatase precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-93  313.3   0.0    1.8e-93  313.1   0.0    1.0  1  Ferrochelatase  Ferrochelatase


Domain annotation for each model (and alignments):
>> Ferrochelatase  Ferrochelatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  313.1   0.0     1e-97   1.8e-93       2     316 ..      56     389 ..      55     390 .. 0.95

  Alignments for each domain:
  == domain 1  score: 313.1 bits;  conditional E-value: 1e-97
                     EEEEEEE----SSCCCHHHHHHHHCT-TTTS-S-TTTHHHHHHHHHHHHHHHHHHHHHHTTSS-SHHHHHHHHHHHHHHHHHHH-...--EEEEE CS
  Ferrochelatase   2 tavLLlnlGgPekpedvrpflenllsdrrvielplllqkllaklilkerlekvaekYekigggSPlneitrkqaealekelaerg...idvkvyl 93 
                     ta++++n+GgP+++++v +fl++l+ d ++i+l  ++q++l+ li+ +r++k+ ++Y++igggSP++++++ qae +++ l++ +   ++++ y+
      KHJ30850.1  56 TAMVFMNMGGPSTTSEVGDFLSRLFADADLIPLG-PFQNYLGPLISSRRTPKIVKQYSEIGGGSPIRKWSEFQAEGMCNILDKISpetAPHRPYV 149
                     79******************************99.9***********************************************99999******* PP

                     EESSSSSBHHHHHHHHHCTT-.....SEEEEEES-SS--TTTHHHHHHHHHHHHHH.............TT-SSEEEEE---TT-HHHHHHHHHH CS
  Ferrochelatase  94 amrywePsiedaleelkadgv.....ervvvlplyPqysasttgssleeleralkk.............kreapevrvirqfydhpgyiealaes 170
                     a+ry +P++e+++++l +dg+      r+v++++yPqys+sttgssl+el++++++             ++ +++++vi++++ hpg+i+a++ +
      KHJ30850.1 150 AFRYANPLTEEMYNKLLDDGFgrgkgGRAVAFTQYPQYSCSTTGSSLNELWKWRQRlegnksplsskngADGTINWSVIDRWPVHPGLIDAISLN 244
                     *********************8888889**************************877888889999888889999******************** PP

                     HHHHHTTS-.HC...C-EEEEEEE--BHHHHT.TT-SHHHHHHHHHHHHHHHTTT-S-EEEEEE---SSS-BSSSBHHHHHHHHCCC.-S-EEEE CS
  Ferrochelatase 171 ikealeelp.eek..kakllfsaHglPeravkkkgdpYqqqveetarlvaealglkeevelayqSrvGpeeWlePdtddtleelaekgvkaivvv 262
                     i+e+l+e+p + +  k+ llfsaH+lP+++v+ +gdpY+++v +t+++v+++lg ++ ++l++qS+vGp+ Wl+ +t+dt+ ++ +kg k++v++
      KHJ30850.1 245 IEEKLQEYPpN-ErcKVILLFSAHSLPMSVVN-RGDPYPAEVAATVSAVMQRLGHSHPYRLVWQSQVGPKAWLGAQTSDTVTNYIAKGNKHLVLI 337
                     ********953.4489***************6.5*******************99999************************************* PP

                     -TT-SS--HHHHIIIIIIIITTSTT..CCCEEE----TT-HHHHHHHHHHHHHH CS
  Ferrochelatase 263 pigFvsDhlEtleeldiearelaeeaggekfvrvptlndspafiealadlveee 316
                     p++F+sDh+Etl+eld e+  +  ++  ++++r ++ln +p fi+alad+++++
      KHJ30850.1 338 PVAFTSDHIETLYELDKEVIGESGHQ--DTVKRSASLNGHPVFIQALADIAKDH 389
                     ****************9995555554..559*******************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3152.48
//
Query:       KHJ30851.1  [L=114]
Description: hypothetical protein EV44_g4985 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        0.2   11.5   3.6        2.5    7.9   3.6    2.0  1  DUF5373   Family of unknown function (DUF5373)


Domain annotation for each model (and alignments):
>> DUF5373  Family of unknown function (DUF5373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   3.6   0.00014       2.5     106     147 ..      51      95 ..       2     104 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00014
     DUF5373 106 lkilflnleaielksvlslvvaliilcvyivYlt..lCrk.Lvka 147
                  kil ++++++  ++++slvv++i+   + +Y +  lCr+ Lv++
  KHJ30851.1  51 KKILKGEMKSSLYRKIFSLVVGAIFWTSVSIYFAciLCRRsLVRD 95 
                 34445558899999************9999997434897537776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 905.18
//
Query:       KHJ30852.1  [L=599]
Description: putative cyclin-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-12   48.1   0.2    4.2e-12   46.7   0.2    1.8  1  Cyclin    Cyclin
     0.0033   17.2   0.1     0.0059   16.4   0.1    1.4  1  Cyclin_N  Cyclin, N-terminal domain


Domain annotation for each model (and alignments):
>> Cyclin  Cyclin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.7   0.2   4.7e-16   4.2e-12      75     160 ..     222     305 ..     107     306 .. 0.72

  Alignments for each domain:
  == domain 1  score: 46.7 bits;  conditional E-value: 4.7e-16
                 HHTT--HHHHHHHHHHHHHHHH..H-TT---STTTHHHHHHHHHHHHHHHH-SS---HHHHHHHHTS-HHHHHHHHHHHHHHTTT- CS
      Cyclin  75 kfgesaplvllgtliYldrivkrcvsealvvtsanihRllivallvatKflvDlsysnekfakvggislkELnkLEidFlflvdFd 160
                   + +++   + +l++++r+ k   +  +   s + +Rl  val+   Kfl+D  y+n+ +a v gis++E+  +E++Fl  + + 
  KHJ30852.1 222 ATTLLTENAVILALLFIYRLKK--YNPSVKGRSGSEYRLFTVALMLGNKFLDDNTYTNSTWADVSGISVQEIHVMEVEFLSNMRYS 305
                 555556666677899*******..9999999*************************************************988775 PP

>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.1   6.6e-07    0.0059      36     126 ..     215     306 ..     210     307 .. 0.92

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 6.6e-07
                 HHHHHHHHHTT--TTHHHHHHHHHHHHHHHS.---CC..CHHHHHHHHHHHHHHHHSSS---HHHHHHHTTTSS-HHHHHHHHHHHHHHTTT-- CS
    Cyclin_N  36 dwlvevaekfkltpetlflavnyldRflskk.svpkd..klqlvgatcLllAaKveeisppkledlvyitdeafteeeilemErliLetLnfdl 126
                 +w+  v + + lt++ ++la+ ++ R+ + + sv+ +     ++++++L+l  K+ ++++ + + ++ +++  ++ +ei  mE ++L+ + ++l
  KHJ30852.1 215 KWISTVLATTLLTENAVILALLFIYRLKKYNpSVKGRsgSEYRLFTVALMLGNKFLDDNTYTNSTWADVSG--ISVQEIHVMEVEFLSNMRYSL 306
                 7****************************7647776688999*************************9977..999************999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (599 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       651  (0.0363099); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.39
# Mc/sec: 4561.76
//
Query:       KHJ30853.1  [L=1159]
Description: putative protein kinase-like (pk-like) [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-09   37.6   0.1      6e-09   35.6   0.1    2.0  1  Pkinase      Protein kinase domain
    4.9e-08   32.6   0.0    8.9e-08   31.7   0.0    1.3  1  Pkinase_Tyr  Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.1   6.7e-13     6e-09      21     191 ..     204     395 ..     198     469 .. 0.73

  Alignments for each domain:
  == domain 1  score: 35.6 bits;  conditional E-value: 6.7e-13
                 TTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS.--HHHHHHHHH...HHHHHHHHH CS
     Pkinase  21 ketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgs.lseeeakkiak...qilegleyl 114
                 + +++++++K  ++ ++ +      ++ ++ ++++k  + i++++++fe   + +++le++++g+l d+ +++      +++ ++++   q+ +gl+ +
  KHJ30853.1 204 NPNSNTFVIKSYSTTRDHDLY----TKQVNTFRSFKnADGILKFFGSFEYRGQSHILLEFADKGTLIDFFKTEAPpTRGDQIIDFWEnilQLTKGLKAI 298
                 456777788887777777655....57788899999899********************************77665677777776651116668***** PP

                 HHTTEE-SS-SGGGEEEETTTE.......EEE-SGTTSEESSSSCS.....BCTTTSCGGGS-HHHH........TTSCBSHHHHHHHHHHHHHHHH CS
     Pkinase 115 HskgiiHrDlKpeNiLidekge.......lKitDFGlakelesssk.....ltsfvgtseYlAPEvl........keneyskkvDvWslGvilyell 191
                 Hs + iH D+ +eNiL+ ++g        +K +  G  +e ++ +         +  +s  l   v+        ++++   +vD+W lG+i+ +  
  KHJ30853.1 299 HSVKGIHNDIFSENILVLSNGTrlpsnwlFKFSNPGTMSESNNYTGqlasmSIPEDSSSVHLKDHVIniesksdhQGTKSLVNVDIWRLGCIFSQAA 395
                 ******************9888899988888888888887777666777653334566777788888888766544555677899999999987764 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   0.0   9.9e-12   8.9e-08      27     140 ..     206     319 ..     187     351 .. 0.81

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 9.9e-12
                  SEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHH...HHHHHHHHHHHH CS
  Pkinase_Tyr  27 kevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekltlkdllsf...alqvAkGmeyLe 120
                  ++ + ++K+    +t ++++  ++++++++++ + + i+k+ g    +++  i++e++++G+L +f +++  ++++ +++++f   +lq+ kG++ ++
   KHJ30853.1 206 NSNTFVIKSY---STTRDHDLYTKQVNTFRSFkNADGILKFFGSFEYRGQSHILLEFADKGTLIDFFKTE-APPTRGDQIIDFwenILQLTKGLKAIH 299
                  4455556666...3444456788899******99999*********99*********************9.7777777777663337899******** PP

                  HTTEEEST-SGGGEEEEETT CS
  Pkinase_Tyr 121 skklvHrdlaarNvLlsenk 140
                  s k +H d+ + N+L+ +n 
   KHJ30853.1 300 SVKGIHNDIFSENILVLSNG 319
                  ***************98754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       604  (0.0336884); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.77u 0.23s 00:00:01.00 Elapsed: 00:00:00.41
# Mc/sec: 8432.72
//
Query:       KHJ30854.1  [L=193]
Description: putative 54s ribosomal protein l12 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.1e-21   75.1   5.9    1.2e-19   70.4   4.1    2.3  2  Ribosomal_L12    Ribosomal protein L7/L12 C-terminal domain
    1.2e-11   44.1   0.8    7.9e-11   41.5   0.0    2.6  3  Ribosomal_L12_N  Ribosomal protein L7/L12 dimerisation domain


Domain annotation for each model (and alignments):
>> Ribosomal_L12  Ribosomal protein L7/L12 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.3   0.0    0.0057        51       8      38 ..      54      83 ..      51      88 .. 0.83
   2 !   70.4   4.1   1.3e-23   1.2e-19       1      66 [.     126     192 ..     126     193 .] 0.97

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0057
                   -TT-.HHHHHHHHHHHH---HHHHHHHHTTTT CS
  Ribosomal_L12  8 agak.KiaVIKaVreitglgLkeaKdlVeaap 38
                   a ++ Ki+VI  V +i +l L e  dlV ++ 
     KHJ30854.1 54 ATTNpKISVI--VDQISQLTLLETADLVSTLK 83
                   5667799998..99**************8765 PP

  == domain 2  score: 70.4 bits;  conditional E-value: 1.3e-23
                    EEEEEEE-TT-.HHHHHHHHHHHH---HHHHHHHHTTTTSTEEEEE-HHHHHHHHHHHHCTT-EEEE CS
  Ribosomal_L12   1 fdViLksagak.KiaVIKaVreitglgLkeaKdlVeaapkvvkegvskeeAeeikkkLeeaGAevel 66 
                    f++ L+s++a+ K ++IK+++++ gl+L+++K++Ve+apk +kegv+keeAe+i + L++ G++v++
     KHJ30854.1 126 FNLKLQSFDAAaKPKIIKEIKSMLGLSLVDSKKFVESAPKLMKEGVAKEEAEKIVASLKALGGVVTM 192
                    899******999*****************************************************87 PP

>> Ribosomal_L12_N  Ribosomal protein L7/L12 dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.0   8.8e-15   7.9e-11       1      40 [.      59      99 ..      59     107 .. 0.84
   2 ?   -0.7   0.0      0.13   1.2e+03       4      12 ..     140     148 ..     138     156 .. 0.75
   3 ?   -1.9   0.1      0.32   2.9e+03       3      12 ..     177     186 ..     176     186 .. 0.88

  Alignments for each domain:
  == domain 1  score: 41.5 bits;  conditional E-value: 8.8e-15
                     HHHHHHHHHHTSBHHHHHHHHHHHHHHTTHHHHHHHHHH... CS
  Ribosomal_L12_N  1 kieeiieaikeltvLElseLvkalEekFGVsAAAPvava..a 40
                     ki+ i+++i++lt+LE+++Lv+ l+++++++++ P+++   a
       KHJ30854.1 59 KISVIVDQISQLTLLETADLVSTLKSRLNIPDI-PMGGIsvA 99
                     6778****************************8.77766322 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.13
                      HHHHHHHTS CS
  Ribosomal_L12_N   4 eiieaikel 12 
                      +ii++ik++
       KHJ30854.1 140 KIIKEIKSM 148
                      577777776 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.32
                      HHHHHHHHTS CS
  Ribosomal_L12_N   3 eeiieaikel 12 
                      e+i++++k+l
       KHJ30854.1 177 EKIVASLKAL 186
                      89*****987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       670  (0.0373696); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1479.99
//
Query:       KHJ30855.1  [L=601]
Description: putative class i alpha-mannosidase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.2e-171  571.6   0.0   1.4e-171  571.4   0.0    1.0  1  Glyco_hydro_47  Glycosyl hydrolase family 47


Domain annotation for each model (and alignments):
>> Glyco_hydro_47  Glycosyl hydrolase family 47
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  571.4   0.0  7.8e-176  1.4e-171       2     458 .]     103     598 ..     102     598 .. 0.97

  Alignments for each domain:
  == domain 1  score: 571.4 bits;  conditional E-value: 7.8e-176
                     HHHHHHHHHHHCTTSSEEETTTTEEE-SS.SS-CCHHHHHHHHHHCCHHHHHHHHHHHHHHC----S.SS.EEEHHHHHHHHHHHHHHHHHHH.S CS
  Glyco_hydro_47   2 fkhswegYkkyAwghDelrPlskkgrdtfgglgatlvDsLdtllimglkeefeeaveavekkidfdtsdskevsvFEttIRyLGGLlsaydlsek 96 
                     f+hsw+gYk+yAw hDe+ Pls+k +d+fgg++atlvDsLdtl+img+k+efe+av a   +idf+ts+  +++vFEttIRyLGG+l+ayd+s++
      KHJ30855.1 103 FNHSWNGYKQYAWLHDEVGPLSGKEKDPFGGWAATLVDSLDTLWIMGMKDEFENAVLAAT-SIDFSTSQDGQINVFETTIRYLGGFLAAYDISGE 196
                     9**********************************************************9.********************************** PP

                     -HHHHHHHHHHHHHHHHGGGSSTTS---SEEETTT--EE-.STCGCEEEHHHHCSSHHHHHHHHHHHT-CHHHHHHHCCHHHHHCHCC.HHHTTB CS
  Glyco_hydro_47  97 kedvllekAveladrLlpAFdtpsglpvarvnlkkrkaskkerassesvlAelgslslEftrLsqlTgdkkYedlaervtkaleelqektklpgl 191
                     k++ ll+kA+e+++ L+ +Fdtp+++pvar+n+k+  ++ ++ as+++ l+elgslslEftrLsqlTgd+k++d+++r+ ++le++q++tklpg+
      KHJ30855.1 197 KYESLLTKAKEIGELLIRSFDTPNRMPVARWNWKPYIDGIPQVASQRTLLSELGSLSLEFTRLSQLTGDPKFYDAIQRISNELEKSQSTTKLPGM 291
                     *********************************************************************************************** PP

                     -BSEEETTT--EE.STEE-SSTTTHHHHHHHHHHHHHCTS--HHHHHHHHHHHHHHHHH.TEEE-TTT..--EEE-EECTT.CTS.EE-EEEGGG CS
  Glyco_hydro_47 192 vpikidastgkfv.aekislgargDSyYEYllKqylllggeeeqyrkmyeealdaikkhllfrpskkkeddllfvgevtst.eegklspeidhLs 284
                     +p +idas  +f   + i+lg+++DS+YEYl+Kqylllgg  +q r++ye+ +  +kkhl++r  ++++++l+++g+v+++ +e + +p  +hL+
      KHJ30855.1 292 WPVTIDASIPSFDtYNFITLGGMSDSLYEYLPKQYLLLGGLLSQPRTLYEDFISVAKKHLFTRFYNEQNNNLTISGDVRVSgTEIHQEPVGQHLT 386
                     ************966789*****************************************988877778899*******98867999********* PP

                     GHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHTSTTS---SEEEE-SS......S-ECTSSSSEEE-......................... CS
  Glyco_hydro_47 285 cFlgGllalgakllekeedlelAkkltegcvkayeatktglmPEifevkpces.aeecewneekkdealk......................... 353
                     cF+gG++al++k+++++e+l lA++lt+gc+++y++ + g++PEif v+pc +  ++c wn++ +++ ++                         
      KHJ30855.1 387 CFTGGMVALASKIFSRPEELPLAEELTQGCIWTYDTSPNGIGPEIFTVSPCPKdGRPCIWNDDLHRKSINenysssesfnktnveqevlnksglp 481
                     ***************************************************88568899999999988889999999999999************ PP

                     .....GGG--B----HHHHHHHHHHHHH--THHHHHHHHHHHHHHHHCEETTEE--ECETTSS........S-EE-S-B-HHHHHTHHHHHHHHC CS
  Glyco_hydro_47 354 ....riedrkyllRPEaiESlfylYritgdekyrevgwemfealekatktesgysaledVtke........epekeDemeSFwlaEtlKYlYLlF 436
                         +++d++y+lRPE+iES+f+lYritg++ y + +w+mf+a+e a++t  + ++++dV ++        + +k D+meSFwlaEtlKY++L F
      KHJ30855.1 482 kgftSVQDHRYILRPEVIESVFILYRITGKQIYADAAWRMFKAVEMACRTPIAAAGIQDVMVKldyadpdiNDQKIDSMESFWLAETLKYFFLCF 576
                     *************************************************************9999999999999********************* PP

                     -S-TTT-TTTEEE-TTS-EEE- CS
  Glyco_hydro_47 437 sdedvlsldeyVfnTeAHplkr 458
                     ++ dv+sld++V+nTeAHplkr
      KHJ30855.1 577 EEWDVISLDDWVLNTEAHPLKR 598
                     ********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (601 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 4268.28
//
Query:       KHJ30856.1  [L=611]
Description: putative coronin-like protein crn1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.2e-35  119.8   0.1    7.6e-35  118.6   0.1    1.7  1  DUF1899      Domain of unknown function (DUF1899)
    8.9e-20   70.3   0.1    2.1e-19   69.2   0.1    1.7  1  WD40_4       Type of WD40 repeat
    1.1e-17   64.0   5.3    2.2e-05   25.1   0.1    4.9  5  WD40         WD domain, G-beta repeat
    1.3e-07   31.8   0.1    0.00021   21.5   0.2    3.5  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0029   16.3   0.2      0.032   12.9   0.1    2.2  2  Nup160       Nucleoporin Nup120/160
     0.0039   16.2   0.0      0.021   13.8   0.0    2.0  2  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
  ------ inclusion threshold ------
      0.016   15.1   5.8      0.024   14.6   5.8    1.3  1  CEP63        Centrosomal protein of 63 kDa
      0.082   13.5   3.1       0.22   12.2   3.1    1.7  1  SlyX         SlyX
        9.3    5.5   9.4         14    4.9   9.4    1.3  1  FAM76        FAM76 protein


Domain annotation for each model (and alignments):
>> DUF1899  Domain of unknown function (DUF1899)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.6   0.1   3.8e-38   7.6e-35       1      66 []       4      69 ..       4      69 .. 0.99

  Alignments for each domain:
  == domain 1  score: 118.6 bits;  conditional E-value: 3.8e-38
     DUF1899  1 rfvrsSkfRhvfgkpakkeecydnirvsknawdsnlikaNpkflAvnwessGGGafaVlplnktGk 66
                rfvr+Sk+Rhvfgk ++ke cydn+r+s+nawd+n+ik+Np++lAvnwe+sGGGafaV+pln++G+
  KHJ30856.1  4 RFVRASKYRHVFGKSSRKEACYDNLRISRNAWDTNIIKVNPQYLAVNWEASGGGAFAVIPLNEKGR 69
                79***************************************************************8 PP

>> WD40_4  Type of WD40 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.1     1e-22   2.1e-19       1      43 [.     348     389 ..     348     390 .. 0.96

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 1e-22
      WD40_4   1 iepisftVPRkskeeFqdDlyPdtagtepaltAeeWlsGknke 43 
                 +episftVPR++ e Fq+D+yP++ g +pa++AeeWlsGk++ 
  KHJ30856.1 348 VEPISFTVPRRA-EVFQSDIYPPATGLKPAISAEEWLSGKDGI 389
                 8***********.***************************975 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.1   2.3e-07   0.00046       7      37 ..      77     109 ..      72     110 .. 0.87
   2 !   15.8   0.0   9.8e-06     0.019       6      38 .]     132     166 ..     128     166 .. 0.81
   3 !   25.1   0.1   1.1e-08   2.2e-05       9      38 .]     177     207 ..     169     207 .. 0.87
   4 ?   -1.4   0.0       2.7   5.4e+03      21      38 .]     233     254 ..     213     254 .. 0.63
   5 ?   -0.3   0.1       1.2   2.3e+03      13      35 ..     271     297 ..     264     300 .. 0.61

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 2.3e-07
                 EESS.SSEEEEEEETTSSEE.EEEETTSEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawl.asGsdDgtvriW 37 
                 ++GH  +v + +++p  + l asGsdDg+v +W
  KHJ30856.1  77 FRGHtAPVLDTDWNPFDDHLiASGSDDGKVFLW 109
                 89**888*****999999973599********* PP

  == domain 2  score: 15.8 bits;  conditional E-value: 9.8e-06
                 EEESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS
        WD40   6 tltGHss.vtslafspdgawla.sGsdDgtvriWd 38 
                 +ltGHs  v  + f+p    ++ s+s D t+++Wd
  KHJ30856.1 132 KLTGHSRkVGQVLFNPAAENILaSASGDYTIKLWD 166
                 589**557*999999999997526667*******9 PP

  == domain 3  score: 25.1 bits;  conditional E-value: 1.1e-08
                 SSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GHss.vtslafspdgawlasGsdDgtvriWd 38 
                  H++ v sl++s +ga+la+ s+D+++r+Wd
  KHJ30856.1 177 KHKDiVQSLSWSANGAMLATTSRDKKLRVWD 207
                 587757************************9 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 2.7
                 TSSEEE.EE.ET..TSEEEEEE CS
        WD40  21 dgawla.sG.sd..DgtvriWd 38 
                 +++ la +G s+  D+   +Wd
  KHJ30856.1 233 EHNRLAtTGfSKmsDRQMALWD 254
                 4455653666323499999998 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 1.2
                 EEEEE...EETTSSE.EEEE.ETTSEEE CS
        WD40  13 vtsla...fspdgaw.lasG.sdDgtvr 35 
                 +++++   +++  +  ++ G + Dg++r
  KHJ30856.1 271 ISGVCmpfWDDGTQClFLGGkG-DGNIR 297
                 5555566544444442454455.**999 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.011        23       3      69 ..      89     169 ..      87     179 .. 0.74
   2 !   21.5   0.2   1.1e-07   0.00021      37      90 ..     178     231 ..     173     233 .. 0.92
   3 ?   -1.9   0.0       2.2   4.3e+03      56      78 ..     290     312 ..     279     322 .. 0.72

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.011
  ANAPC4_WD40   3 wcptmD.LiAlatedgellvfRlng.qrvwtl...........eedkedsevrsLaWkpd.gklLavaysdgevrlldaes 69 
                  w+p  D LiA +++dg++ + R+     +++            + ++++++v ++ ++p  +++La a  d +++l d+ +
   KHJ30856.1  89 WNPFDDhLIASGSDDGKVFLWRVPQdFTLFSDaegpvdvapycKLTGHSRKVGQVLFNPAaENILASASGDYTIKLWDIGK 169
                  777665599999999999999985523344436777777777777888999999999985378999999999999988755 PP

  == domain 2  score: 21.5 bits;  conditional E-value: 1.1e-07
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  ++  v+sL+W+ +g +La    d ++r+ d+ +++  h+++ ++  + + + W+
   KHJ30856.1 178 HKDIVQSLSWSANGAMLATTSRDKKLRVWDVRQERPAHEVQSHNGAKNSRVVWM 231
                  56779**************************************99988888886 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 2.2
  ANAPC4_WD40  56 aysdgevrlldaesgkvvhslsv 78 
                  +  dg++r ++ e+ k    +++
   KHJ30856.1 290 GKGDGNIRYFEYENDKFEFLSEY 312
                  56799999999999886555554 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.08   1.6e+02     229     247 ..     149     167 ..     140     190 .. 0.84
   2 !   12.9   0.1   1.6e-05     0.032     229     265 ..     190     224 ..     178     255 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.08
                 TTTEEEEEETT-EEEEEET CS
      Nup160 229 gqtylfalsrdgkLrvWnl 247
                 ++++l+++s d+++++W++
  KHJ30856.1 149 AENILASASGDYTIKLWDI 167
                 689**************98 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 1.6e-05
                 TTTEEEEEETT-EEEEEETTTTEEEEEEE--.-SSST CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclatidllrdeeaq 265
                 + ++l++ srd+kLrvW+++  +++   +    + a+
  KHJ30856.1 190 NGAMLATTSRDKKLRVWDVRQERPAHEVQSH--NGAK 224
                 6689****************99998885554..3444 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.36   7.1e+02      57      96 ..      73     112 ..      39     116 .. 0.74
   2 !   13.8   0.0   1.1e-05     0.021     178     253 ..     170     240 ..     152     246 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.36
    Ge1_WD40  57 eraLlkglkgevldlafahvsskillavdekgslfvykve 96 
                 +  L +g ++ vld  +   +++ +++  + g++f+++v 
  KHJ30856.1  73 QIPLFRGHTAPVLDTDWNPFDDHLIASGSDDGKVFLWRVP 112
                 4458889999999999999999999999999999999885 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 1.1e-05
    Ge1_WD40 178 eegllkieehsliveaafspdGtalatasedGevkffqvyledeeeprCLheWkPhdGkslssllfldnhkeesde 253
                 e++ l ++++  + + ++s++G+ lat+s d +++ + v     +++r  he + h+G + s ++++ +h++ + +
  KHJ30856.1 170 ESSHLLLKHKDIVQSLSWSANGAMLATTSRDKKLRVWDV-----RQERPAHEVQSHNGAKNSRVVWMGEHNRLATT 240
                 45667777888889999******************9987.....678999*****************999986655 PP

>> CEP63  Centrosomal protein of 63 kDa
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   5.8   1.2e-05     0.024     187     258 ..     542     610 ..     505     611 .] 0.84

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.2e-05
       CEP63 187 veldsqseiqrLrskleraqdtleaqelelerLrllveelgkskrvlleekqeleeelresekqlqvleeek 258
                 ++   +s + +++s le  ++t+++q+l++ rL   v+ l  +   +++  qe+++++re e +l+++++e+
  KHJ30856.1 542 NDKLLKSSLAQIKSMLETQTETINSQNLQISRLAHEVDTLKTK---VSNGSQEQSDRIRELELELEAVRAEN 610
                 45557999***************************99998654...68889999999999999999999885 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   3.1   0.00011      0.22      10      56 ..     548     594 ..     544     605 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00011
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXXX CS
        SlyX  10 iklafqedtieeLndvvaeqqqqidrlqrqlrllaerlkeleessga 56 
                 + la    ++e+  +++  q+ qi+rl ++++ l+ ++++ ++++++
  KHJ30856.1 548 SSLAQIKSMLETQTETINSQNLQISRLAHEVDTLKTKVSNGSQEQSD 594
                 678889999*****************************887777654 PP

>> FAM76  FAM76 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   9.4    0.0072        14     164     286 ..     476     604 ..     418     611 .] 0.46

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0072
       FAM76 164 ekskekkaskkkskkhkkrssrlevskle.eek.........laeekesnetskk........sldsnssdhlva..vtqLkeeiaslkkqleqkdqel 242
                 e +k +++ ++ +++h+k +s++++  l  + +         +++++++++  ++          +s s+d+l++  ++q+k  +++   ++++++ ++
  KHJ30856.1 476 EITKPTQKFNTPTTRHEKDPSQSNIEPLPrT-TynefesapeKNSQAKGHQ--MSslvsqsplLEESISNDKLLKssLAQIKSMLETQTETINSQNLQI 571
                 2222222222223333333332233222220.1222222222111111111..1123322333445555566654224455555555555555555555 PP

       FAM76 243 lekdkkitelkaellekekelreklkelekeakekieklekkir 286
                 +   +++ +lk++  +  +e  ++++ele e            +
  KHJ30856.1 572 SRLAHEVDTLKTKVSNGSQEQSDRIRELELEL-----------E 604
                 55555555555555555555555555555443...........3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (611 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1103  (0.0615204); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.42
# Mc/sec: 4340.17
//
Query:       KHJ30857.1  [L=2421]
Description: putative denitrification regulatory protein nirq protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   7.7e-125  411.4   0.0    3.8e-20   72.3   0.0    9.5  9  AAA_5            AAA domain (dynein-related subfamily)
    3.4e-61  204.0   6.1    1.6e-25   89.4   0.0    5.5  4  AAA_lid_7        Midasin AAA lid domain
    4.4e-35  120.4   0.0    2.6e-12   46.7   0.0    8.3  8  AAA_3            ATPase family associated with various cellul
    6.6e-34  117.7   7.0    1.6e-05   25.3   0.1    8.3  7  AAA_16           AAA ATPase domain
    2.6e-31  107.9   2.2      8e-30  103.1   0.1    4.0  2  AAA_lid_5        Midasin AAA lid domain
    1.1e-30  106.8   0.5    0.00052   20.4   0.0    7.9  6  AAA              ATPase family associated with various cellul
    2.4e-30  105.4   6.2    6.7e-07   29.0   0.1    7.3  7  AAA_7            P-loop containing dynein motor region
    7.4e-26   90.9   0.1    0.00021   20.4   0.0    9.1  8  AAA_6            Hydrolytic ATP binding site of dynein motor 
    3.2e-24   85.3   0.0      3e-05   24.1   0.0    8.2  7  Dynein_heavy     Dynein heavy chain region D6 P-loop domain
    3.6e-24   85.3   0.0    0.00086   19.3   0.0    8.1  7  AAA_14           AAA domain
    2.5e-23   82.9   4.4     0.0018   18.5   0.0    8.1  6  AAA_22           AAA domain
    1.7e-21   76.9   0.3      0.043   14.0   0.0    8.2  7  AAA_33           AAA domain
    4.1e-20   72.7   2.7     0.0034   17.9   0.0    7.6  6  AAA_18           AAA domain
    4.8e-20   71.9   0.2     0.0093   15.7   0.0    6.9  6  Sigma54_activat  Sigma-54 interaction domain
    5.8e-20   71.6   0.2     0.0039   17.2   0.0    6.6  6  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
    2.3e-18   66.3   4.9     0.0021   17.2   0.0    6.3  6  T2SSE            Type II/IV secretion system protein
    4.2e-17   62.5   0.0      0.005   16.6   0.0    7.8  7  AAA_30           AAA domain
    5.3e-17   62.6   1.8     0.0038   17.8   0.0    6.7  6  ABC_tran         ABC transporter
    4.9e-16   59.1   0.8      0.041   14.3   0.0    6.9  6  RNA_helicase     RNA helicase
    1.4e-14   54.0   0.2        2.1    7.7   0.0    8.9  8  Mg_chelatase     Magnesium chelatase, subunit ChlI
    1.9e-14   54.0  10.6       0.11   12.4   0.1    7.6  7  NACHT            NACHT domain
    1.5e-13   50.4   0.0       0.67    9.2   0.0    7.1  6  Zeta_toxin       Zeta toxin
    3.5e-13   49.9   0.3    0.00041   20.5   0.0    6.3  6  Sigma54_activ_2  Sigma-54 interaction domain
    1.6e-12   48.0   2.6       0.26   11.6   0.0    6.9  6  AAA_19           AAA domain
    1.8e-12   47.3   4.2      0.073   12.8   0.0    8.0  8  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    3.8e-12   46.2   1.7        0.2   11.2   0.0    6.8  6  AAA_25           AAA domain
    5.7e-12   45.7   0.1       0.29   10.8   0.0    6.3  6  IstB_IS21        IstB-like ATP binding protein
    1.3e-11   44.5   2.2       0.26   10.9   0.0    6.2  6  SRP54            SRP54-type protein, GTPase domain
    2.2e-11   43.3   0.5       0.95    9.3   0.0    6.4  6  AAA_29           P-loop containing region of AAA domain
    5.2e-11   42.7   7.0        0.4   10.6   0.0    6.3  6  RsgA_GTPase      RsgA GTPase
    1.4e-10   41.7   3.5        1.7    8.9   0.0    6.5  6  AAA_28           AAA domain
    8.2e-10   38.8   0.6       0.12   12.1   0.0    6.4  6  Viral_helicase1  Viral (Superfamily 1) RNA helicase
    3.8e-09   36.8   0.3        3.1    7.7   0.0    6.8  6  ATPase_2         ATPase domain predominantly from Archaea
    3.9e-09   36.4   1.9      0.025   14.3   0.0    5.4  5  PduV-EutP        Ethanolamine utilisation - propanediol utili
    4.4e-09   36.5   3.8       0.28   11.1   0.0    6.4  6  Rad17            Rad17 P-loop domain
    4.4e-09   36.3   0.0       0.25   11.0   0.0    6.4  6  AAA_24           AAA domain
    1.7e-08   34.1   0.4       0.15   11.5   0.0    6.0  6  TniB             Bacterial TniB protein
    2.6e-08   34.2   0.0         11    6.1   0.0    6.9  6  AAA_2            AAA domain (Cdc48 subfamily)
    4.9e-08   33.2   0.7      0.071   13.1   0.1    6.0  6  ResIII           Type III restriction enzyme, res subunit
    6.3e-08   33.1   3.6       0.99    9.8   0.0    6.1  5  AAA_17           AAA domain
    2.2e-07   31.0   3.3        3.1    7.9   0.0    6.5  6  MMR_HSR1         50S ribosome-binding GTPase
    2.2e-07   30.4   0.2        1.1    8.5   0.0    5.6  5  ATPase           KaiC
    3.3e-07   30.6   2.9        4.8    7.4   0.1    6.3  6  Roc              Ras of Complex, Roc, domain of DAPkinase
    7.6e-07   28.7   4.0        7.7    5.9   0.0    6.5  6  SRPRB            Signal recognition particle receptor beta su
    1.8e-06   28.0   8.3       0.27   11.1   0.0    5.6  5  NTPase_1         NTPase
    1.8e-06   27.3   6.2        1.9    7.6   0.0    6.4  7  DUF815           Protein of unknown function (DUF815)
    1.8e-06   28.0   0.6        2.3    7.9   0.0    5.8  6  AAA_11           AAA domain
      2e-06   27.2   0.2        8.8    5.4   0.0    5.6  5  NB-ARC           NB-ARC domain
    2.3e-06   27.6   5.9        2.9    7.7   0.0    6.0  5  dNK              Deoxynucleoside kinase
    5.6e-06   25.6   0.0        8.6    5.4   0.0    5.8  5  MCM              MCM P-loop domain
    6.8e-06   25.5   2.9        4.9    6.3   0.0    5.9  6  TIP49            TIP49 P-loop domain
    7.6e-06   25.4   3.6        1.8    7.8   0.1    5.6  5  AAA_8            P-loop containing dynein motor region D4
    9.3e-06   25.4   1.1        1.1    8.9   0.0    6.4  7  Thymidylate_kin  Thymidylate kinase
    1.3e-05   25.1   0.2       0.56    9.9   0.0    5.4  3  DEAD             DEAD/DEAH box helicase
    2.1e-05   24.5   0.2         37    4.1   0.0    6.0  5  Bac_DnaA         Bacterial dnaA  protein
    2.3e-05   24.4   0.2         11    6.0   0.2    5.2  4  CbiA             CobQ/CobB/MinD/ParA nucleotide binding domai
    3.8e-05   24.3  17.7        1.7    9.1   0.0    7.2  5  AAA_23           AAA domain
    4.2e-05   23.2   9.2        1.8    8.1   0.2    6.0  6  cobW             CobW/HypB/UreG, nucleotide-binding domain
      6e-05   22.9   8.4        3.6    7.3   0.0    5.9  6  ATP_bind_1       Conserved hypothetical ATP binding protein
     0.0001   21.8   0.6         22    4.3   0.0    5.2  5  FtsK_SpoIIIE     FtsK/SpoIIIE family
    0.00027   20.5   0.1          2    7.8   0.0    5.2  5  PhoH             PhoH-like protein
     0.0004   20.3   0.1        8.3    6.3   0.0    4.7  5  Ploopntkinase3   P-loop Nucleotide Kinase3
    0.00084   19.1   0.1        3.3    7.4   0.0    4.0  3  PRK              Phosphoribulokinase / Uridine kinase family
     0.0011   18.8   9.3         15    5.5   0.0    6.0  6  MobB             Molybdopterin guanine dinucleotide synthesis
     0.0012   18.4   0.0         25    4.2   0.0    5.4  5  KTI12            Chromatin associated protein KTI12
     0.0019   16.9   0.4       0.23   10.0   0.0    2.7  2  DUF853           Bacterial protein of unknown function (DUF85
     0.0036   16.6   0.9         29    3.8   0.0    4.5  4  Septin           Septin
     0.0041   16.9   0.2         12    5.6   0.0    4.3  3  Cytidylate_kin   Cytidylate kinase
     0.0053   16.9   0.5        3.8    7.6   0.1    3.5  2  SKI              Shikimate kinase
     0.0061   15.8   1.6        5.2    6.2   0.0    3.9  3  DUF2075          Uncharacterized conserved protein (DUF2075)
     0.0096   15.6   0.1         12    5.5   0.0    3.9  4  ATP-synt_ab      ATP synthase alpha/beta family, nucleotide-b
  ------ inclusion threshold ------
      0.011   15.2   3.2        3.9    7.0   0.0    4.9  5  FeoB_N           Ferrous iron transport protein B
      0.018   14.0   0.3         24    3.7   0.0    4.8  4  TrwB_AAD_bind    Type IV secretion-system coupling protein DN
      0.025   13.5   0.4         24    3.8   0.0    3.7  4  MeaB             Methylmalonyl Co-A mutase-associated GTPase 
      0.028   14.5   2.6         45    4.0   0.0    5.1  4  DUF87            Helicase HerA, central domain
      0.033   13.7   5.8        5.2    6.5   0.0    5.1  5  Arf              ADP-ribosylation factor family
      0.036   14.3   0.0       0.34   11.2   0.0    2.8  1  GAF_2            GAF domain
      0.041   13.3   0.0         13    5.1   0.0    3.3  3  IPT              Isopentenyl transferase
      0.088   12.1   1.7         31    3.8   0.0    4.4  4  DnaB_C           DnaB-like helicase C terminal domain
       0.13   11.4   1.8         20    4.1   0.1    3.8  2  Parvo_NS1        Parvovirus non-structural protein NS1
       0.16   11.4   0.0         22    4.4   0.0    3.9  2  SMC_N            RecF/RecN/SMC N terminal domain
       0.39   10.6   6.7         32    4.4   0.0    4.5  4  AAA_31           AAA domain
       0.52    9.9   4.2         30    4.2   0.0    4.2  4  Ras              Ras family


Domain annotation for each model (and alignments):
>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   0.0   1.8e-22   3.8e-20       2     122 ..     293     412 ..     292     428 .. 0.91
   2 !   25.7   0.0   4.3e-08   9.4e-06       2      47 ..     630     675 ..     629     687 .. 0.92
   3 !   33.8   0.0   1.3e-10   2.9e-08      49     138 .]     797     889 ..     781     889 .. 0.77
   4 !   69.4   0.0   1.3e-21   2.9e-19       1     138 []    1079    1215 ..    1079    1215 .. 0.96
   5 !   33.1   0.1   2.3e-10   4.9e-08       1      75 [.    1372    1445 ..    1372    1479 .. 0.79
   6 !   50.2   0.0   1.2e-15   2.6e-13      49     138 .]    1484    1573 ..    1468    1573 .. 0.84
   7 !   60.7   0.0   6.8e-19   1.5e-16       2     138 .]    1755    1893 ..    1754    1893 .. 0.93
   8 !   24.5   0.0   9.7e-08   2.1e-05       2      49 ..    2065    2112 ..    2064    2192 .. 0.83
   9 !   28.6   0.0   5.6e-09   1.2e-06      51     128 ..    2202    2281 ..    2182    2287 .. 0.80

  Alignments for each domain:
  == domain 1  score: 72.3 bits;  conditional E-value: 1.8e-22
                 EEEE--SSSSHHHHHHHGGGGB..S--EEEEE--TT--HHHHH--B--...........--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE. CS
       AAA_5   2 vlLvGppGtgKselaerlaaal..nreveyvqltrdtteedlkgrreik..ngttslvdsplvraaregeilvlDEveraesevlnsLlslleerrlll 96 
                 +lL G pG+gK+ l+  +a+ l   +++++  l+++t ++ l+g + +   +g  ++++++l++a++eg+ +++++++ra+ +v++  lsl e+r+l++
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELglASTMVTLHLNEQTDAKVLIGVYATGsnPGSFEWKPGVLTTAVKEGRWIFIEDIDRAPNDVISLILSLVERRELHI 391
                 89********************888889999999*************9999************************************************ PP

                 .-SSSEEE---......-EEEEEESS CS
       AAA_5  97 eeggelvkaknddllerfrviatanp 122
                 +++ge+++a ++     frv+a+  +
  KHJ30857.1 392 PNRGEVIRAGRE-----FRVLASIQT 412
                 **********97.....999998765 PP

  == domain 2  score: 25.7 bits;  conditional E-value: 4.3e-08
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B-- CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrrei 47 
                 +lL+G++G+gK++++++la  l+ ++++v+l+++ +  dl+g+ ++
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLGYKLVVVNLSQQSEVGDLLGSFKP 675
                 89***************************************99875 PP

  == domain 3  score: 33.8 bits;  conditional E-value: 1.3e-10
                 ........--------G-SEEEEESGGG--HHHHHHHHHHHHS.....SEEE..-SSSEEE---............-EEEEEESS--..-TT-TTHHHH CS
       AAA_5  49 ngttslvdsplvraaregeilvlDEveraesevlnsLlsllee.....rrllleeggelvkaknddller......frviatanpld.rslnelspalr 135
                 + t ++v+s + +a+r+g+ ++lDE++ a++++l+s   ll++     r + l+e g+           r      fr+++++np+   ++ +l p+lr
  KHJ30857.1 797 GFTFAFVESNIIKAVRNGDWVLLDEINLASPDTLESISDLLYNsseesRSIILPETGNIK---------RicanpsFRIFGAMNPATdVGKRDLPPSLR 886
                 557899***********************************8722222333344433333.........3344455***********9*********** PP

                 TT- CS
       AAA_5 136 sRf 138
                 sRf
  KHJ30857.1 887 SRF 889
                 **9 PP

  == domain 4  score: 69.4 bits;  conditional E-value: 1.3e-21
                  EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--..........--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE. CS
       AAA_5    1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreik.ngttslvdsplvraaregeilvlDEveraesevlnsLlslleerrlll 96  
                  +vl++Gp+ +gK++++e+la+  +++ + +++++ t  ++ +g++  + +g+  ++++ l +a r+g+ ++lDE++ a+++vl++L++ll+++r  l
  KHJ30857.1 1079 PVLIQGPTSSGKTSMIEYLARYSGNKCVRINNHEHTDLQEYLGSYVSTsDGNLTFQEGLLIQALRRGHWIILDELNLAPTDVLEALNRLLDDNREIL 1175
                  599*****************************************99888******************************************999999 PP

                  .-SSSEEE---......-EEEEEESS--...-TT-TTHHHHTT- CS
       AAA_5   97 eeggelvkaknddllerfrviatanpld..rslnelspalrsRf 138 
                   + +++v  + d+    f+++at np+   ++++ ls a+r Rf
  KHJ30857.1 1176 IPETQEVVRPHDG----FMLFATQNPPGhyGGRKILSRAFRNRF 1215
                  9999888888888....************999999********9 PP

  == domain 5  score: 33.1 bits;  conditional E-value: 2.3e-10
                  EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------G-SEEEEESGG CS
       AAA_5    1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEve 75  
                  +vlLvG++G+gK+++ + la+ + +++++v+ +++t++ dl+g  ++  ++++ v  +l++a  ++  l++ +++
  KHJ30857.1 1372 PVLLVGETGCGKTTVCQMLAESFAKKLFTVNAHQNTETGDLIGAQRP-VRNRAEVAEILMQALLKALSLCDKDIT 1445
                  59*****************************************9998.777778888888888865555555554 PP

  == domain 6  score: 50.2 bits;  conditional E-value: 1.2e-15
                  ........--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..-SSSEEE---.........-EEEEEESS--..-TT-TTHHHHTT- CS
       AAA_5   49 ngttslvdsplvraaregeilvlDEveraesevlnsLlslleerrllleeggelvkaknddller...frviatanpld.rslnelspalrsRf 138 
                  n   ++ d+ lv+a+reg+ ++lDE+  a +++l++L+s+le++r  l   ++ ++       ++   f+++at+np   +++ elspalr Rf
  KHJ30857.1 1484 NALFEWCDGGLVQAMREGQFFLLDEISLAGDAILERLNSVLETERTILLAEKGIEDSFV----KAvdgFQIFATMNPGGdYGKRELSPALRNRF 1573
                  56679*************************************88877777666664422....22345*************************9 PP

  == domain 7  score: 60.7 bits;  conditional E-value: 6.8e-19
                  EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.............--------G-SEEEEESGGG--HHHHHHHHHHHHSS.E CS
       AAA_5    2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreik....ngttslvdsplvraaregeilvlDEveraesevlnsLlslleer.r 93  
                  +lL G+pG+gK++l+  la++ n++++ ++l++    +dl+g+  +       + +++d p+ +a+++ge ++lDE + a+++vl+ L+  l++r +
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVCNQSLTRINLSEHSDLTDLFGSDVPVanaeICQFEWRDAPFLQAMQKGEWVLLDEMNLAPQSVLEGLNACLDHRgE 1851
                  89****************************************9665556556789**************************************9868 PP

                  EE..-SSSEEE---......-EEEEEESS--...-TT-TTHHHHTT- CS
       AAA_5   94 llleeggelvkaknddllerfrviatanpld..rslnelspalrsRf 138 
                  +++ ++++  k+ +d     f+++a+ np +   +++ l ++++ Rf
  KHJ30857.1 1852 VYITQLNKKFKCHPD-----FSIFAAQNPHHqgSGRKGLPSSFVNRF 1893
                  99999*******998.....***********9888888999999998 PP

  == domain 8  score: 24.5 bits;  conditional E-value: 9.7e-08
                  EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.. CS
       AAA_5    2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikn 49  
                   lLvG +G+gK+ l  ++aa ++++++   l++dt + dl+g++e ++
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHIAAIIGKKLVNLSLNSDTDTMDLIGGYEQAD 2112
                  59******************************************9653 PP

  == domain 9  score: 28.6 bits;  conditional E-value: 5.6e-09
                  ......--------G-SEEEEESGGG--HHHHHHHHHHHHSS.EEE..-SSSEEE---.........-EEEEEESS--.-TT CS
       AAA_5   51 ttslvdsplvraaregeilvlDEveraesevlnsLlslleer.rllleeggelvkaknddller...frviatanpldrsln 128 
                  + ++vd++lv+a +eg+ l+lD  + ++ +vl++ +slle + +l ++e  ++ ++++  + e+   fr+++t+ p+ ++l+
  KHJ30857.1 2202 QFEWVDGALVKALEEGQWLILDNANLCSASVLDRINSLLEPNgHLCINEQCGQDGKPR--IVEPhpdFRIFMTMDPRFGELS 2281
                  679*************************************662677777777777777..4455677********9984443 PP

>> AAA_lid_7  Midasin AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.4   0.0   7.3e-28   1.6e-25       1     106 []     445     560 ..     445     560 .. 0.96
   2 !   50.2   0.2   1.1e-15   2.5e-13       1     105 [.    1227    1321 ..    1227    1322 .. 0.96
   3 !   10.7   0.0    0.0022      0.47       1      83 [.    1586    1658 ..    1586    1672 .. 0.85
   4 !   52.4   0.0   2.3e-16     5e-14       1     103 [.    1905    2004 ..    1905    2006 .. 0.93

  Alignments for each domain:
  == domain 1  score: 89.4 bits;  conditional E-value: 7.3e-28
   AAA_lid_7   1 eLeeilqskfpllasvadklievyeelrseqsssrsfs....gspreislRDLlkWcrRlsalldrsg......flspsvreeifleavdvFaaslstq 89 
                 eL++++ +k+pll+s+++ +ievy++l+s  +s+  fs      +r i+ RDLlkWcrRl+  l+++g      ++ + +r e+flea+d+Faas+++ 
  KHJ30857.1 445 ELHQVIFKKYPLLHSFIPGIIEVYSRLQSIPESTLGFSsikyFYRRAITPRDLLKWCRRLEGVLTKNGsrtssdPIDDRTRYEMFLEAIDCFAASVPNL 543
                 8*********************************7776677999***********************9******************************* PP

   AAA_lid_7  90 edrlrvaeviaehlgls 106
                 + r++v+++iae+++++
  KHJ30857.1 544 DVRESVISLIAEAMHID 560
                 **************985 PP

  == domain 2  score: 50.2 bits;  conditional E-value: 1.1e-15
   AAA_lid_7    1 eLeeilqskf.pllasvadklievyeelrseqsssrsfsgspreislRDLlkWcrRlsalldrsgflspsvreeifleavdvFaaslstqedrlrva 96  
                  eLe+il++++ +++ s + ++++vy+el+++++s+r+f +++   +lRDL++W+ R   +           re+++  +++++a++++++e+r++v 
  KHJ30857.1 1227 ELETILKTRCqNVAPSDCGRIVKVYKELSKLRQSNRFFEHKNSFATLRDLFRWAFRKYDT-----------REQLAANGYMLLAERVRNPEERNAVQ 1312
                  8*********99******************************************998555...........9************************* PP

   AAA_lid_7   97 eviaehlgl 105 
                  ++i++++++
  KHJ30857.1 1313 NIIEKVMKV 1321
                  *****9987 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 0.0022
   AAA_lid_7    1 eLeeilqskf.pllasvadklievyeelrseqsssrsfsgspreislRDLlkWcrRlsalldrsgflspsvreeifleavdvFa 83  
                  +++ i+qsk  +  +++ ++++++ e   + +++s     s  +is+RD+l W r ++         s ++  ++++ a +v+ 
  KHJ30857.1 1586 DIHIIVQSKLnQKFKTFSRAMVQFAEWFAHKYRHS-----SITSISIRDMLTWVRFINDCC------SHNAYFSLVQGAAMVYI 1658
                  7889******999*********************9.....99*************999883......44566666666666665 PP

  == domain 4  score: 52.4 bits;  conditional E-value: 2.3e-16
   AAA_lid_7    1 eLeeilqskf.pllasvadklievyeelrseqsssrsfs..gspreislRDLlkWcrRlsalldrsgflspsvreeifleavdvFaaslstqedrlr 94  
                  +L+ i++++f +++++ ++++i+++++l++   s+r+f+  g p+e++lRD+l+W+++l+++ +         + ++ +++  +F ++++t++dr +
  KHJ30857.1 1905 DLKVICKQRFpSVSEDTVNSIISFVTRLEKVILSKRTFGsqGGPWEFNLRDMLRWLQLLTSNKP------LLEAAQPSDFVHTIFRQRFRTPQDRIE 1995
                  9*********669999**********************999********************955......458889999999*************** PP

   AAA_lid_7   95 vaeviaehl 103 
                  + ++ ae++
  KHJ30857.1 1996 IDNIHAEIF 2004
                  *99999887 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   1.8e-05     0.004       2     109 ..     293     409 ..     292     423 .. 0.80
   2 ?    7.4   0.0     0.017       3.7       2      43 ..     630     671 ..     629     680 .. 0.87
   3 ?    3.5   0.0      0.27        59      64     129 ..     815     889 ..     796     891 .. 0.71
   4 !   21.0   0.0   1.1e-06   0.00024       2     130 ..    1080    1216 ..    1079    1217 .. 0.79
   5 ?    5.1   0.0     0.086        19       2      46 ..    1373    1417 ..    1372    1444 .. 0.83
   6 ?    1.1   0.0       1.5   3.2e+02      96     129 ..    1540    1573 ..    1495    1575 .. 0.77
   7 !   46.7   0.0   1.2e-14   2.6e-12       2     130 ..    1755    1894 ..    1754    1895 .. 0.85
   8 ?    6.1   0.0     0.043       9.4       2      44 ..    2065    2107 ..    2064    2134 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.8e-05
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqft..pdllPsdilGtevfeekekefefkkGpvfanl.....lladeinrappktqsalleameerqvtv 93 
                 +ll+g+PG +ktllv+ +a+ l+l  + + +          ++G+    ++  +fe k+G + + +     ++ ++i+rap  + s +l  +e r++ +
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELGLASTMVTLHlnEQTDAKVLIGVYATGSNPGSFEWKPGVLTTAVkegrwIFIEDIDRAPNDVISLILSLVERRELHI 391
                 79********************998887765410445555678999999999********99987655566999***************9999877666 PP

       AAA_3  94 ..egethklpepflvlat 109
                   +ge  +  + f vla 
  KHJ30857.1 392 pnRGEVIRAGREFRVLAS 409
                 115566667788888885 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.017
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilG 43 
                 +ll g  G++kt++v++la++l+ ++  + +      +d+lG
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLGYKLVVVNLSQQSEVGDLLG 671
                 689999******************999998887777777776 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.27
       AAA_3  64 nllladeinrappktqsa...ll.eameerqvtvegethkl.....pepflvlatqnPieqeGtyplpeaqldrf 129
                 + +l dein a+p t  +   ll ++ ee++  +  et ++     +  f ++ + nP    G   lp +   rf
  KHJ30857.1 815 DWVLLDEINLASPDTLESisdLLyNSSEESRSIILPETGNIkricaNPSFRIFGAMNPATDVGKRDLPPSLRSRF 889
                 56999********9865422244145566655555555444111215579999**************99999998 PP

  == domain 4  score: 21.0 bits;  conditional E-value: 1.1e-06
       AAA_3    2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkkGpvfanl.....lladeinrappktqsalleameerqvtv 93  
                  vl++g    +kt +++ la+  + +  ri         + lG+ v ++++ +++f++G +++ l     ++ de+n ap+ +  al   +++++  +
  KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLARYSGNKCVRINNHEHTDLQEYLGSYV-STSDGNLTFQEGLLIQALrrghwIILDELNLAPTDVLEALNRLLDDNREIL 1175
                  799999999*********************998888899999876.566789*******998655555599************99988877655444 PP

       AAA_3   94 ...egethklpepflvlatqnPieqeGt.yplpeaqldrfl 130 
                     ++e  + ++ f+++atqnP  + G    l  a  +rfl
  KHJ30857.1 1176 ipeTQEVVRPHDGFMLFATQNPPGHYGGrKILSRAFRNRFL 1216
                  0004444444677********98776651567888888886 PP

  == domain 5  score: 5.1 bits;  conditional E-value: 0.086
       AAA_3    2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtev 46  
                  vll g  G +kt++ ++la+++  ++  +    +   +d++G++ 
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFAKKLFTVNAHQNTETGDLIGAQR 1417
                  799999********************9999999999999999864 PP

  == domain 6  score: 1.1 bits;  conditional E-value: 1.5
       AAA_3   96 ethklpepflvlatqnPieqeGtyplpeaqldrf 129 
                  +  k  + f ++at nP    G  +l  a  +rf
  KHJ30857.1 1540 SFVKAVDGFQIFATMNPGGDYGKRELSPALRNRF 1573
                  445566789********************99999 PP

  == domain 7  score: 46.7 bits;  conditional E-value: 1.2e-14
       AAA_3    2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtev..feekekefefkkGpvfanl.....lladeinrappktq...salleamee 88  
                  +lleg PG++kt+l+ ala++ + +++ri +      +d+ G++v   +++  +fe +  p ++ +     +l de+n ap  +     a l+   e
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVCNQSLTRINLSEHSDLTDLFGSDVpvANAEICQFEWRDAPFLQAMqkgewVLLDEMNLAPQSVLeglNACLDHRGE 1851
                  79*****************************98888899999876215566689999999999754444449*********9986222566888889 PP

       AAA_3   89 rqvtvegethklpepflvlatqnPieq.eGtyplpeaqldrfl 130 
                    +t  ++++k +  f ++a+qnP +q +G   lp + ++rf 
  KHJ30857.1 1852 VYITQLNKKFKCHPDFSIFAAQNPHHQgSGRKGLPSSFVNRFT 1894
                  99**********************987479999********97 PP

  == domain 8  score: 6.1 bits;  conditional E-value: 0.043
       AAA_3    2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGt 44  
                  +ll g+ G +kt l +++a +++ ++  + + +d    d++G 
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHIAAIIGKKLVNLSLNSDTDTMDLIGG 2107
                  6899***********************************9996 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   3.9e-05    0.0084      21      51 ..     289     317 ..     280     338 .. 0.79
   2 ?   -0.7   0.0       7.5   1.6e+03     137     164 ..     362     389 ..     353     394 .. 0.82
   3 !   18.9   0.0     7e-06    0.0015      25      56 ..     628     660 ..     613     791 .. 0.81
   4 !   13.3   0.2   0.00039     0.083      12      81 ..    1066    1131 ..    1058    1181 .. 0.62
   5 !   25.3   0.1   7.5e-08   1.6e-05       8     117 ..    1355    1477 ..    1353    1549 .. 0.64
   6 !   14.7   0.0   0.00014     0.031      25      51 ..    1753    1779 ..    1740    1840 .. 0.77
   7 !   22.5   0.0   5.6e-07   0.00012      26     131 ..    2064    2170 ..    2044    2246 .. 0.63

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 3.9e-05
      AAA_16  21 sgrpelvllsGesGvGKsslvrellralekd 51 
                 s+  + +ll+G +G+GK+ lv+ ++r+l  +
  KHJ30857.1 289 SS--SPILLHGLPGSGKTLLVNDFARELGLA 317
                 44..569******************998765 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 7.5
      AAA_16 137 lvlvlDdlqwadeaslqllaaLlrlles 164
                   ++++d+++a  +  +l+ +L++++e 
  KHJ30857.1 362 RWIFIEDIDRAPNDVISLILSLVERREL 389
                 569**********999999999988775 PP

  == domain 3  score: 18.9 bits;  conditional E-value: 7e-06
      AAA_16  25 elvllsGesGvGKsslvrellralekdggif.l 56 
                 e +ll+Ge G+GK+++v++l+++l  + +++ l
  KHJ30857.1 628 EPILLIGETGIGKTTVVQQLADSLGYKLVVVnL 660
                 7899*******************9999444333 PP

  == domain 4  score: 13.3 bits;  conditional E-value: 0.00039
      AAA_16   12 LlsalervrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysa.laqalareel 81  
                  +l++++++++ r   vl+ G+  +GK+s+++ l+r+   +   ++r ++++++   +y+  ++++ +   l
  KHJ30857.1 1066 ILNLVRAISTRR-YPVLIQGPTSSGKTSMIEYLARYSGNK---CVRINNHEHTDLQEYLGsYVSTSDG-NL 1131
                  567777666666.699******************766666...6666666664446675555555544.33 PP

  == domain 5  score: 25.3 bits;  conditional E-value: 7.5e-08
      AAA_16    8 eleqLlsalervrsgrpelvllsGesGvGKsslvrellralekd....ggiflrgkcdqlesaipy...salaqalareellrqlldeaesaeleaw 97  
                   +++L  +++ + ++  e vll+Ge G+GK+++ ++l++++ k+    +++  +++ d  ++++p    + +a++l +  ll++l   +++    ++
  KHJ30857.1 1355 AIQRLYILVSHAIQNN-EPVLLVGETGCGKTTVCQMLAESFAKKlftvNAHQNTETGDLIGAQRPVrnrAEVAEILMQ-ALLKALSLCDKDITDKYD 1449
                  5788888888777777.89*************************3332222233333333444555553447777766.777777766666566666 PP

      AAA_16   98 rekleeala.....avpelagaea...s 117 
                     l+++++     +v++++++++   +
  KHJ30857.1 1450 INILLKSYQslreeEVSKIPSEIHktiN 1477
                  6666666664444433344443334442 PP

  == domain 6  score: 14.7 bits;  conditional E-value: 0.00014
      AAA_16   25 elvllsGesGvGKsslvrellralekd 51  
                    +ll G++GvGK++l+++l+r  +++
  KHJ30857.1 1753 KPILLEGNPGVGKTTLITALARVCNQS 1779
                  5699*****************654444 PP

  == domain 7  score: 22.5 bits;  conditional E-value: 5.6e-07
      AAA_16   26 lvllsGesGvGKsslvrellralekdggiflrgkcdqlesa..ipy.sa.laqalareellrqlldeaesaeleawrekleealaavpelagaeasr 118 
                   +ll+G sG+GK++l+++++  + k+  + l+ + d  +++    y +a   +++ + +l+++l++  ++++l+  + +l+++++   e++  e+  
  KHJ30857.1 2064 PCLLVGLSGSGKTALLNHIAAIIGKK-LVNLSLNSDTDTMDliGGYeQAdPRRTF-A-SLCEELETLMNQKLLSTLSSQLPQEAKYLEEMKNNERLP 2157
                  489*****************888888.4447777777755522111211122333.3.555555555666777777777777777555555555544 PP

      AAA_16  119 llellkrllalls 131 
                  + + l++l+++ s
  KHJ30857.1 2158 FQNMLSNLAQKVS 2170
                  4444444442222 PP

>> AAA_lid_5  Midasin AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.1   0.1   3.7e-32     8e-30       1     104 [.     903    1006 ..     903    1008 .. 0.98
   2 ?    1.1   0.0       1.9   4.1e+02       1      69 [.    1905    1970 ..    1905    2003 .. 0.79

  Alignments for each domain:
  == domain 1  score: 103.1 bits;  conditional E-value: 3.7e-32
   AAA_lid_5    1 DLellvknyLkevsltdqalvtdvvefYlelkklaerkeltdgagqkphfSlRtlsraLsyartilklaglrralyeGfsmsFltqLdsesrkkvek 97  
                  DL++++k y+k+++++d++ + d++++Y+++ +l ++k+l+d a+q phfSlRtl+raLsy++++++l+glrral eGf m Flt Ld+es+++++ 
  KHJ30857.1  903 DLIDIIKVYIKGNLNNDEKAIYDIARLYMKIINLIQEKKLVDVANQVPHFSLRTLTRALSYTEKMAPLYGLRRALSEGFAMGFLTFLDQESENLLKL 999 
                  9************************************************************************************************ PP

   AAA_lid_5   98 lirkill 104 
                  li+++l 
  KHJ30857.1 1000 LIDNFLS 1006
                  ***9986 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 1.9
   AAA_lid_5    1 DLellvknyLkevsltdqalvtdvvefYlelkklaerkeltdgagqkphfSlRtlsraLsyartilkla 69  
                  DL+ + k+ + +vs +    v++++ f ++l k+  +k+   ++g    f lR + r L++   + +l+
  KHJ30857.1 1905 DLKVICKQRFPSVSEDT---VNSIISFVTRLEKVILSKRTFGSQGGPWEFNLRDMLRWLQLLTSNKPLL 1970
                  77777788888877765...9999999999999999777778888899************999887774 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0     4e-05    0.0087       1      35 [.     293     329 ..     293     386 .. 0.73
   2 !   17.0   0.0   2.8e-05    0.0061       1      34 [.     630     663 ..     630     710 .. 0.86
   3 !   12.3   0.0   0.00078      0.17       1      69 [.    1080    1155 ..    1080    1215 .. 0.69
   4 !   19.2   0.2   5.7e-06    0.0012       1      37 [.    1373    1409 ..    1373    1575 .. 0.86
   5 !   20.4   0.0   2.4e-06   0.00052       1      33 [.    1755    1787 ..    1755    1812 .. 0.93
   6 !   10.6   0.0    0.0026      0.56       2      35 ..    2066    2099 ..    2065    2161 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 4e-05
                 EEEESSTTSSHHHHHHHHHHHHT..HEEEEEETTTCS CS
         AAA   1 vllyGppGtGKTllakavakelg..vefleisgsell 35 
                 +ll+G pG GKTll++  a+elg  ++++++ + e +
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELGlaSTMVTLHLNEQT 329
                 69*******************9865777888777776 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 2.8e-05
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTC CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsel 34 
                 +ll+G  G+GKT++++++a +lg +++ +++s+ 
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLGYKLVVVNLSQQ 663
                 69*********************99999998875 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 0.00078
                  EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSS......STTHHHHHHHHHHHHH...HHTS..TSEEEEEETGGG CS
         AAA    1 vllyGppGtGKTllakavakelgvefleisgsellsk......yvgesekkirelfkea...keka..kpsilfiDEida 69  
                  vl+ Gp   GKT++++ +a+ +g ++++i+ +e ++       yv+ s  ++  +f+e    +  a  + + +++DE+  
  KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLARYSGNKCVRINNHEHTDLqeylgsYVSTSDGNL--TFQEGlliQ--AlrRGHWIILDELNL 1155
                  6899***************************999933555555554444444..444421112..132337777888754 PP

  == domain 4  score: 19.2 bits;  conditional E-value: 5.7e-06
                  EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSS CS
         AAA    1 vllyGppGtGKTllakavakelgvefleisgsellsk 37  
                  vll+G  G+GKT++++ +a+++  +++++++++ ++ 
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFAKKLFTVNAHQNTET 1409
                  79****************************9988844 PP

  == domain 5  score: 20.4 bits;  conditional E-value: 2.4e-06
                  EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTT CS
         AAA    1 vllyGppGtGKTllakavakelgvefleisgse 33  
                  +ll G+pG+GKT+l+ a+a+ +++++ +i++se
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVCNQSLTRINLSE 1787
                  699**************************9987 PP

  == domain 6  score: 10.6 bits;  conditional E-value: 0.0026
                  EEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCS CS
         AAA    2 llyGppGtGKTllakavakelgvefleisgsell 35  
                  ll+G  G GKT+l + +a  +g +++++s+ + +
  KHJ30857.1 2066 LLVGLSGSGKTALLNHIAAIIGKKLVNLSLNSDT 2099
                  9**************************9998766 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1   6.5e-05     0.014      21      77 ..     279     333 ..     261     339 .. 0.79
   2 !   20.2   0.0   1.5e-06   0.00033       8      75 ..     599     666 ..     595     674 .. 0.79
   3 !   11.2   0.0   0.00088      0.19      25      56 ..    1069    1100 ..    1050    1125 .. 0.80
   4 !   29.0   0.1   3.1e-09   6.7e-07      10      65 ..    1347    1402 ..    1339    1411 .. 0.87
   5 !   12.2   0.0   0.00045     0.098      26      62 ..    1745    1780 ..    1732    1795 .. 0.77
   6 ?   -0.9   0.0       4.7     1e+03     120     177 ..    1836    1897 ..    1820    1901 .. 0.81
   7 !   12.4   0.0   0.00038     0.082      28      68 ..    2057    2096 ..    2053    2105 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 6.5e-05
       AAA_7  21 rysyllelllknkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanq 77 
                  ++ + e l  ++ p+ll G  G+GKt++++d+ ++l     +++t+ ++ qt+a+ 
  KHJ30857.1 279 NMENFAEAL-LSSSPILLHGLPGSGKTLLVNDFARELG-LASTMVTLHLNEQTDAKV 333
                 444444444.4578************************.8888999999***99975 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 1.5e-06
       AAA_7   8 kfseilVptvdtvrysyllel...llknkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsa 75 
                 kf+++l p  +tv  + lle+    +  + p+ll+G+tG GKt+++++l ++l    y+ +++n+s+q + 
  KHJ30857.1 599 KFTSTLRPFANTVFAKRLLEQigaAIIYSEPILLIGETGIGKTTVVQQLADSLG---YKLVVVNLSQQSEV 666
                 566666666777777777766222466799***********************9...99999999999875 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 0.00088
       AAA_7   25 llelllknkkpvllvGptGtGKtviikdllkk 56  
                  l++ + ++++pvl+ Gpt +GKt++i+ l + 
  KHJ30857.1 1069 LVRAISTRRYPVLIQGPTSSGKTSMIEYLARY 1100
                  7888999******************9876554 PP

  == domain 4  score: 29.0 bits;  conditional E-value: 3.1e-09
       AAA_7   10 seilVptvdtvrysyllelllknkkpvllvGptGtGKtviikdllkkldkekylsl 65  
                  s+ +V t+   r+ +l+++ ++n+ pvllvG+tG+GKt++++ l +++ k+ ++++
  KHJ30857.1 1347 SQEIVWTQAIQRLYILVSHAIQNNEPVLLVGETGCGKTTVCQMLAESFAKKLFTVN 1402
                  677999***************************************99997666554 PP

  == domain 5  score: 12.2 bits;  conditional E-value: 0.00045
       AAA_7   26 lelllknkkpvllvGptGtGKtviikdllkkldkeky 62  
                  +   l+ +kp+ll G+ G+GKt++i+ l + ++ +++
  KHJ30857.1 1745 IVRALQVRKPILLEGNPGVGKTTLITALARVCN-QSL 1780
                  4567899*******************9998888.333 PP

  == domain 6  score: -0.9 bits;  conditional E-value: 4.7
       AAA_7  120 qppiellRqlldygg.wYdrk.klefkeikdvqlvaamgp..pgggrneitpRllrhfnvla 177 
                  q+ +e l  +ld++g +Y ++ + +fk   d ++ aa +p  +g+gr+ +++ ++ +f+v+ 
  KHJ30857.1 1836 QSVLEGLNACLDHRGeVYITQlNKKFKCHPDFSIFAAQNPhhQGSGRKGLPSSFVNRFTVVY 1897
                  778888999999988788885145999999*******9983357889999999999999876 PP

  == domain 7  score: 12.4 bits;  conditional E-value: 0.00038
       AAA_7   28 lllknkkpvllvGptGtGKtviikdllkkldkekylsltin 68  
                   +++++ p+llvG +G+GKt++++++   +  +k++ l++n
  KHJ30857.1 2057 ICIQQNIPCLLVGLSGSGKTALLNHIAAIIG-KKLVNLSLN 2096
                  5899*******************99888777.555544444 PP

>> AAA_6  Hydrolytic ATP binding site of dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.57   1.2e+02      37      78 ..     295     338 ..     273     348 .. 0.78
   2 !   11.2   0.0    0.0006      0.13      37      78 ..     632     673 ..     607     700 .. 0.84
   3 !   13.8   0.0   9.5e-05      0.02      82     197 ..     811     931 ..     791     969 .. 0.68
   4 !   20.4   0.0   9.6e-07   0.00021       7      73 ..    1051    1118 ..    1046    1187 .. 0.78
   5 !   19.6   0.1   1.7e-06   0.00037       3      70 ..    1341    1408 ..    1340    1414 .. 0.93
   6 ?    3.6   0.0      0.12        27     124     201 ..    1537    1615 ..    1509    1643 .. 0.69
   7 ?    4.8   0.0     0.053        11      21      74 ..    1741    1794 ..    1727    2076 .. 0.58
   8 ?   -0.2   0.0       1.7   3.7e+02      26      72 ..    2056    2102 ..    2052    2170 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.57
       AAA_6  37 paGpagtGKtEtvkdLakala..kqvvvfncsdqldykslgkif 78 
                 ++G  g GKt  v d+a++l+   ++v ++ ++q d+k l  ++
  KHJ30857.1 295 LHGLPGSGKTLLVNDFARELGlaSTMVTLHLNEQTDAKVLIGVY 338
                 57889*************98611567777888888888776555 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.0006
       AAA_6  37 paGpagtGKtEtvkdLakalakqvvvfncsdqldykslgkif 78 
                 + G +g GKt  v++La +l+  +vv+n s+q ++  l   f
  KHJ30857.1 632 LIGETGIGKTTVVQQLADSLGYKLVVVNLSQQSEVGDLLGSF 673
                 6799***************************99887766655 PP

  == domain 3  score: 13.8 bits;  conditional E-value: 9.5e-05
       AAA_6  82 aqsGaWgCfdeFnrielevLSvvaqqiktiqqalkekkkkfvf.egk...eiklnksvgifitmnp.gyagrteLPdnLkalfRpvammvPdle...lI 172
                 ++ G W+ +de+n  + + L  ++  + +     +e+++++++ e     +i  n+s++if  mnp +  g+ +LP +L++ f ++ +  Pd +   lI
  KHJ30857.1 811 VRNGDWVLLDEINLASPDTLESISDLLYN----SSEESRSIILpETGnikRICANPSFRIFGAMNPaTDVGKRDLPPSLRSRFTEIYVNNPDRSlddLI 905
                 67899999999999999999998876654....344444444423331226779************45679*********************9622258 PP

       AAA_6 173 aeimLfseGfkeakela.kklvtlyk 197
                   i+++ +G  +++e a   +  ly 
  KHJ30857.1 906 DIIKVYIKGNLNNDEKAiYDIARLYM 931
                 88888888876665433123444443 PP

  == domain 4  score: 20.4 bits;  conditional E-value: 9.6e-07
       AAA_6    7 gnserLviTpltdrcyltltqAlklklgg.apaGpagtGKtEtvkdLakalakqvvvfncsdqldyks 73  
                  +++++ + Tp  dr  l l++A++++ +   ++Gp+  GKt  +  La+  ++ +v +n +++ d + 
  KHJ30857.1 1051 QQEQNYIRTPSVDRNILNLVRAISTRRYPvLIQGPTSSGKTSMIEYLARYSGNKCVRINNHEHTDLQE 1118
                  5678899*****************988752689*****************************999875 PP

  == domain 5  score: 19.6 bits;  conditional E-value: 1.7e-06
       AAA_6    3 yeYlgnserLviTpltdrcyltltqAlklklggapaGpagtGKtEtvkdLakalakqvvvfncsdqld 70  
                  y+ ++ns+++v T   +r y+ + +A++ +    + G +g GKt  ++ La+++ak ++ +n +++ +
  KHJ30857.1 1341 YNLTQNSQEIVWTQAIQRLYILVSHAIQNNEPVLLVGETGCGKTTVCQMLAESFAKKLFTVNAHQNTE 1408
                  778899********************************************************988765 PP

  == domain 6  score: 3.6 bits;  conditional E-value: 0.12
       AAA_6  124 fegkeiklnksvgifitmnp.gyagrteLPdnLkalfRpvammvPdlelIaeimLfseGfkeakelakklvtlykllse 201 
                  +e++ +k  + ++if tmnp g  g+ eL   L+  f ++ +     +  ++i++ s+  ++ k+ ++ +v++ + + +
  KHJ30857.1 1537 IEDSFVKAVDGFQIFATMNPgGDYGKRELSPALRNRFTEIWVPPLSDQNDIHIIVQSKLNQKFKTFSRAMVQFAEWFAH 1615
                  567778888899********55789************999775322222234445555556666666666666555555 PP

  == domain 7  score: 4.8 bits;  conditional E-value: 0.053
       AAA_6   21 cyltltqAlklklggapaGpagtGKtEtvkdLakalakqvvvfncsdqldyksl 74  
                    + +++Al+++    ++G  g GKt  +  La+   + ++ +n s++ d + l
  KHJ30857.1 1741 NSMRIVRALQVRKPILLEGNPGVGKTTLITALARVCNQSLTRINLSEHSDLTDL 1794
                  556677777777777778888888888888888888887777777777765543 PP

  == domain 8  score: -0.2 bits;  conditional E-value: 1.7
       AAA_6   26 tqAlklklggapaGpagtGKtEtvkdLakalakqvvvfncsdqldyk 72  
                  +  ++ ++ + + G +g GKt     +a  ++k +v +  + + d+ 
  KHJ30857.1 2056 MICIQQNIPCLLVGLSGSGKTALLNHIAAIIGKKLVNLSLNSDTDTM 2102
                  5667788888999*******************999877766665544 PP

>> Dynein_heavy  Dynein heavy chain region D6 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0      0.24        51      47      68 ..     353     374 ..     289     413 .. 0.82
   2 ?   -0.0   0.0       4.1   8.8e+02       4      41 ..     628     665 ..     626     670 .. 0.88
   3 !   13.8   0.0   0.00021     0.045      30     104 ..     787     885 ..     772     899 .. 0.67
   4 !   15.2   0.0   7.7e-05     0.017      30      97 ..    1120    1198 ..    1075    1213 .. 0.71
   5 ?    3.1   0.0      0.44        95      48      96 ..    1494    1556 ..    1488    1566 .. 0.74
   6 !   12.1   0.0   0.00072      0.15      50      98 ..    1818    1877 ..    1810    1899 .. 0.80
   7 !   24.1   0.0   1.4e-07     3e-05      18     117 ..    2179    2297 ..    2160    2299 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.24
                   HHHHHHHHT-EEEEE-GGG-CC CS
  Dynein_heavy  47 alekaakegsWvlLqNchlaps 68 
                   +l++a+keg+W++++++  ap+
    KHJ30857.1 353 VLTTAVKEGRWIFIEDIDRAPN 374
                   689*************988865 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 4.1
                   S-EEEEE-TT--THHHHHHHHHHTT--EEEEETTSHHH CS
  Dynein_heavy   4 tPvlfilspgadptesleklakklkklvksvslGqgqe 41 
                    P+l+i ++g+  t+ +++la++l+  +  v l q++e
    KHJ30857.1 628 EPILLIGETGIGKTTVVQQLADSLGYKLVVVNLSQQSE 665
                   69********************9988778888888876 PP

  == domain 3  score: 13.8 bits;  conditional E-value: 0.00021
                   -EEEEETTSH..HHHHHHHHHHHHHHHT-EEEEE-GGG-.CCCHHHHHHH.......................HHTT-EEEEEEES-T.....TS-H CS
  Dynein_heavy  30 lvksvslGqg..qeeeaekalekaakegsWvlLqNchla.pswlkeLekileel................eeklhssfRlwltsepsp.....kfPi 102
                   + +++ lG +      +e+ + ka+++g+WvlL ++ la p+ l++++++l ++                + ++++sfR++  ++p++     ++P 
    KHJ30857.1 787 FENKINLGPKgfTFAFVESNIIKAVRNGDWVLLDEINLAsPDTLESISDLLYNSseesrsiilpetgnikRICANPSFRIFGAMNPATdvgkrDLPP 883
                   5556666665333446889999*****************7777777777765444455555666656555556666999999988887444444555 PP

                   HH CS
  Dynein_heavy 103 sl 104
                   sl
    KHJ30857.1 884 SL 885
                   55 PP

  == domain 4  score: 15.2 bits;  conditional E-value: 7.7e-05
                    -EEEEETTSHHHHHHHHHHHHHHHHT-EEEEE-GGG-.CCCHHHHHHH.................HHTT-EEEEEEES- CS
  Dynein_heavy   30 lvksvslGqgqeeeaekalekaakegsWvlLqNchla.pswlkeLekileel..........eeklhssfRlwltseps 97  
                    l ++vs  +g+    e +l +a ++g+W++L +  la ++ l+ L+++l++             + h+ f l+ t +p 
    KHJ30857.1 1120 LGSYVSTSDGNLTFQEGLLIQALRRGHWIILDELNLApTDVLEALNRLLDDNreilipetqeVVRPHDGFMLFATQNPP 1198
                    45679999999999999********************778899*****8866677777765434457799999998876 PP

  == domain 5  score: 3.1 bits;  conditional E-value: 0.44
                    HHHHHHHT-EEEEE-GGG-.CCCHHHHHHH.............HHT.......T-EEEEEEES CS
  Dynein_heavy   48 lekaakegsWvlLqNchla.pswlkeLekileel......eeklhs.......sfRlwltsep 96  
                    l +a++eg++ lL ++ la    l++L+++le+       e+ +++        f+++ t++p
    KHJ30857.1 1494 LVQAMREGQFFLLDEISLAgDAILERLNSVLETErtillaEKGIEDsfvkavdGFQIFATMNP 1556
                    679****************555699*****986566777633333323333446688887776 PP

  == domain 6  score: 12.1 bits;  conditional E-value: 0.00072
                    HHHHHT-EEEEE-GGG-.CCCHHHHHHH.................HHTT-EEEEEEES-T CS
  Dynein_heavy   50 kaakegsWvlLqNchla.pswlkeLekileel..........eeklhssfRlwltsepsp 98  
                    +a+++g+WvlL ++ la +s l+ L+  l++           + k+h++f ++   +p++
    KHJ30857.1 1818 QAMQKGEWVLLDEMNLApQSVLEGLNACLDHRgevyitqlnkKFKCHPDFSIFAAQNPHH 1877
                    89***************5566899999977556677777777777899999999988887 PP

  == domain 7  score: 24.1 bits;  conditional E-value: 1.4e-07
                    HHHHHHHHHTT--EEEEETTSH.HHHHHHHHHHHHHHHT-EEEEE-GGG-.CCCHHHHHHH.......................HHTT-EEEEEE CS
  Dynein_heavy   18 esleklakklkklvksvslGqg.qeeeaekalekaakegsWvlLqNchla.pswlkeLekileel................eeklhssfRlwlts 94  
                    +++e+la++ ++l k++    g q e ++ al ka +eg+W++L N  l+ +s l++++++le                    + h++fR+++t+
    KHJ30857.1 2179 QDFEDLAQRFHTLSKNFDTQIGiQFEWVDGALVKALEEGQWLILDNANLCsASVLDRINSLLEPNghlcineqcgqdgkprIVEPHPDFRIFMTM 2273
                    56777888776666666666666778999*********************7888999999976445667777788888877556699******** PP

                    ES-TT.S-HHHHHTSEEEEE---S CS
  Dynein_heavy   95 epspk.fPislLqssikvtnepPk 117 
                    +p    +  ++ ++s+ +  ep +
    KHJ30857.1 2274 DPRFGeLSRAMRNRSLEIYLEPQS 2297
                    **9744999999999999988865 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0     0.013       2.8       3      47 ..     291     334 ..     289     401 .. 0.64
   2 !   14.6   0.0   0.00011     0.025       3      92 ..     628     732 ..     626     740 .. 0.77
   3 !   19.3   0.0     4e-06   0.00086       3      93 ..    1078    1174 ..    1076    1179 .. 0.72
   4 !    9.2   0.0    0.0053       1.1       2      43 ..    1370    1408 ..    1369    1444 .. 0.75
   5 ?   -0.2   0.0       4.3   9.3e+02      62      79 ..    1492    1515 ..    1450    1582 .. 0.60
   6 !   18.1   0.0     1e-05    0.0022       2      99 ..    1752    1856 ..    1751    1866 .. 0.72
   7 ?    3.4   0.0      0.34        74       4      43 ..    2064    2100 ..    2061    2136 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.013
      AAA_14   3 kilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkla 47 
                  ++++ G+  +GKT l++++++el   ++ ++ + l++++d+k  
  KHJ30857.1 291 SPILLHGLPGSGKTLLVNDFARELG-LASTMVTLHLNEQTDAKVL 334
                 57899*****************999.7788888888888885533 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 0.00011
      AAA_14   3 kilvitGaRrvGKTtllkqlikellvkkesilyinldderd.............kkladpekllelilek.lke.......ekktylflDEiqevpewe 80 
                 +++++ G   +GKTt+++ql+++l     + + +nl ++++             k+la+p  l +++ e+           ++k++ +lD   + ++w 
  KHJ30857.1 628 EPILLIGETGIGKTTVVQQLADSLG---YKLVVVNLSQQSEvgdllgsfkpiniKSLANP--LKDEFDELfT-LtglsatrNQKYLELLDKCFRKEQWN 720
                 578999999************9998...9*********9999999888877765444444..4444444421.12355577899999************ PP

      AAA_14  81 kalkslvdegkn 92 
                 k+ k l++  k 
  KHJ30857.1 721 KFSKLLCEAPKM 732
                 **9999987754 PP

  == domain 3  score: 19.3 bits;  conditional E-value: 4e-06
      AAA_14    3 kilvitGaRrvGKTtllkqlikellvkkesilyinldderd........kkladpe...kllelileklke.ekktylflDEiqevpe.wekalksl 86  
                   +++i+G+  +GKT +++ l++ +    ++++ in  +++d           ++++   ++ e +l +  + ++ ++++lDE   +p+ + +al++l
  KHJ30857.1 1078 YPVLIQGPTSSGKTSMIEYLARYSG---NKCVRINNHEHTDlqeylgsyV--STSDgnlTFQEGLLIQ--AlRRGHWIILDELNLAPTdVLEALNRL 1167
                  5799*****************9998...9999998888777433333221..1222223344444444..2558999********985499****** PP

      AAA_14   87 vdegknl 93  
                  +d+++++
  KHJ30857.1 1168 LDDNREI 1174
                  **98664 PP

  == domain 4  score: 9.2 bits;  conditional E-value: 0.0053
      AAA_14    2 rkilvitGaRrvGKTtllkqlikellvkkesilyinldderd 43  
                  +++++++G   +GKTt+++ l+++     ++ + +n  ++++
  KHJ30857.1 1370 NEPVLLVGETGCGKTTVCQMLAESFA---KKLFTVNAHQNTE 1408
                  7899**************99997766...8999999888766 PP

  == domain 5  score: -0.2 bits;  conditional E-value: 4.3
      AAA_14   62 e......ekktylflDEiqevpew 79  
                  +      ++ ++++lDEi+ + ++
  KHJ30857.1 1492 GglvqamREGQFFLLDEISLAGDA 1515
                  13333455788999***9988443 PP

  == domain 6  score: 18.1 bits;  conditional E-value: 1e-05
      AAA_14    2 rkilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklke............ekktylflDEiqevpe.wekalks 85  
                  rk+++++G   vGKTtl+  l++     ++s   inl +++d +    ++++ +  e   +            +k ++++lDE+  +p+ + + l+ 
  KHJ30857.1 1752 RKPILLEGNPGVGKTTLITALARVC---NQSLTRINLSEHSDLTDLFGSDVPVANAEI-CQfewrdapflqamQKGEWVLLDEMNLAPQsVLEGLNA 1844
                  68999****************9655...5***********995544222222222222.111223345666677999**********9746788999 PP

      AAA_14   86 lvdegknldvivtG 99  
                  ++d++  ++v++t 
  KHJ30857.1 1845 CLDHR--GEVYITQ 1856
                  99977..7899885 PP

  == domain 7  score: 3.4 bits;  conditional E-value: 0.34
      AAA_14    4 ilvitGaRrvGKTtllkqlikellvkkesilyinldderd 43  
                  +++++G+  +GKT ll++++       ++ + ++l++++d
  KHJ30857.1 2064 PCLLVGLSGSGKTALLNHIAAIIG---KKLVNLSLNSDTD 2100
                  67899************9985544...6777777766666 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0    0.0012      0.25       7      30 ..     292     315 ..     288     349 .. 0.75
   2 !   17.4   0.0   1.9e-05     0.004       8      58 ..     630     671 ..     626     701 .. 0.91
   3 !    8.6   0.0    0.0097       2.1       5     118 ..    1077    1170 ..    1073    1181 .. 0.80
   4 !   18.5   0.0   8.5e-06    0.0018       8      52 ..    1373    1408 ..    1367    1532 .. 0.75
   5 !   10.3   0.0     0.003      0.65       5      56 ..    1752    1794 ..    1747    1799 .. 0.79
   6 !    8.6   0.0    0.0098       2.1       8      70 ..    2065    2134 ..    2061    2199 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.0012
      AAA_22   7 ilvvtGesGtGKTtllrrlleqld 30 
                  ++++G +G+GKT+l++ ++++l 
  KHJ30857.1 292 PILLHGLPGSGKTLLVNDFARELG 315
                 689*****************9985 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 1.9e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllr 58 
                 ++++Ge+G+GKTt++++l+++l         + ++v v+l+++++  dll 
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSL---------GYKLVVVNLSQQSEVGDLLG 671
                 89********************.........99999999999998888765 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.0097
      AAA_22    5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelkaerlsseell.ealeqalraravielliiDEa 100 
                  ++ +++ G++ +GKT  ++ l++           + ++v+++  + t++++ l   ++  + +l             +l qalr+ +    +i+DE 
  KHJ30857.1 1077 RYPVLIQGPTSSGKTSMIEYLARYS---------GNKCVRINNHEHTDLQEYLGSYVSTSDGNLTF--------QeGLLIQALRRGH---WIILDEL 1153
                  6678999**************9998.........9************9999999999999954444........4244555555554...5999999 PP

      AAA_22  101 qhlrseealeeLrsllnl 118 
                      + ++le L +ll++
  KHJ30857.1 1154 NLA-PTDVLEALNRLLDD 1170
                  999.99999999888886 PP

  == domain 4  score: 18.5 bits;  conditional E-value: 8.5e-06
      AAA_22    8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpssts 52  
                  ++++Ge+G+GKTt++++l+e++          +++++v++ + t+
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESF---------AKKLFTVNAHQNTE 1408
                  789******************9.........44444444444443 PP

  == domain 5  score: 10.3 bits;  conditional E-value: 0.003
      AAA_22    5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdl 56  
                  ++ +++ G +G+GKTtl+  l++           + ++ +++l++ ++++dl
  KHJ30857.1 1752 RKPILLEGNPGVGKTTLITALARVC---------NQSLTRINLSEHSDLTDL 1794
                  567999**************99975.........666667777777766666 PP

  == domain 6  score: 8.6 bits;  conditional E-value: 0.0098
      AAA_22    8 lvvtGesGtGKTtllrrlleqldeeakaee.......erpevv....fvtlpsst.sskdllrellralglelka 70  
                  ++++G sG+GKT ll+ ++      +k  +           ++     ++ + +  + ++l++el   ++++l +
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHIAAIIG--KKLVNlslnsdtD---TMdligGYEQADPRrTFASLCEELETLMNQKLLS 2134
                  589**************999872..2222245443331...2222232222222223333333333333333333 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0    0.0002     0.043       2      29 ..     293     324 ..     293     368 .. 0.84
   2 ?   -0.8   0.0       7.2   1.6e+03      63      94 ..     578     609 ..     553     618 .. 0.78
   3 !   12.6   0.0   0.00052      0.11       2      32 ..     630     664 ..     630     731 .. 0.67
   4 ?    8.2   0.0     0.012       2.6       2      89 ..    1080    1164 ..    1080    1184 .. 0.72
   5 ?    7.2   0.0     0.024       5.3       2      43 ..    1373    1418 ..    1373    1460 .. 0.69
   6 !   10.1   0.0    0.0032      0.68       2      46 ..    1755    1803 ..    1755    1849 .. 0.69
   7 !   12.5   0.0   0.00056      0.12       3      75 ..    2066    2178 ..    2065    2197 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 0.0002
      AAA_33   2 vllvGlpGsGKstlaerllkklg....avlls 29 
                 +ll+GlpGsGK+ l+   +++lg    +v+l 
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELGlastMVTLH 324
                 689********************988755543 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 7.2
      AAA_33  63 arkalsagrnvildatnlsrrerarflklarr 94 
                 +++ ls gr++i+ + nl+++++   l+ + +
  KHJ30857.1 578 LQRSLSIGRAYITKNLNLRQNKFTSTLRPFAN 609
                 577899***************99877776654 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 0.00052
      AAA_33   2 vllvGlpGsGKstlaerllkklg....avllssdt 32 
                 +ll+G  G GK+t++++l+  lg    +v ls+ +
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLGyklvVVNLSQQS 664
                 689********************664333344444 PP

  == domain 4  score: 8.2 bits;  conditional E-value: 0.012
      AAA_33    2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqqsktdytrvldrlyqilnelarkalsagrnvildatnlsrrerarfl 89  
                  vl+ G+  sGK+  +e l++  g  +v+++  + ++ l +        y   +d    ++++l+ +al++g  +ild  nl + +  + l
  KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLARYSGnkCVRINNHE-HTDLQEYLGS----YVSTSDGNLTFQEGLLIQALRRGHWIILDELNLAPTDVLEAL 1164
                  6788****************9999999999875.7777664332....333444455577899999999999999999999886554443 PP

  == domain 5  score: 7.2 bits;  conditional E-value: 0.024
      AAA_33    2 vllvGlpGsGKstlaerllkklg....avllssdtlrrrlfgtdqq 43  
                  vllvG  G+GK+t+ + l++  +    +v   ++t+   l g +++
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFAkklfTVNAHQNTETGDLIGAQRP 1418
                  799**********999986554444325556666666666665554 PP

  == domain 6  score: 10.1 bits;  conditional E-value: 0.0032
      AAA_33    2 vllvGlpGsGKstlaerllkklg....avllssdtlrrrlfgtdqqskt 46  
                  +ll G pG+GK+tl++ l++        + ls+ + ++ lfg+d++  +
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVCNqsltRINLSEHSDLTDLFGSDVPVAN 1803
                  6899**************9887777434446666666677777776554 PP

  == domain 7  score: 12.5 bits;  conditional E-value: 0.00056
      AAA_33    3 llvGlpGsGKstlaerllkklg....avllssdt................................lrrrlfgtdqqsktdytrvldr....lyqil 59  
                  llvGl+GsGK+ l+ ++++  g       l+sdt                                l+++l  + +q  +++ + +++    + ++l
  KHJ30857.1 2066 LLVGLSGSGKTALLNHIAAIIGkklvNLSLNSDTdtmdliggyeqadprrtfaslceeletlmnqkLLSTLSSQLPQEAKYLEEMKNNerlpFQNML 2162
                  79***************87777776466688888999999999999999999999998777777776666666666666666666665667889999 PP

      AAA_33   60 nelarkalsagrnvil 75  
                  ++la+k+ + g +v +
  KHJ30857.1 2163 SNLAQKVSQIGSQVNI 2178
                  9999999999988765 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0     0.032       6.9       1      25 [.     293     324 ..     293     374 .. 0.79
   2 !   12.3   0.0   0.00085      0.18       1      44 [.     630     676 ..     630     714 .. 0.82
   3 ?    7.3   0.0      0.03       6.4       1      30 [.    1080    1122 ..    1080    1188 .. 0.70
   4 !   17.9   0.0   1.6e-05    0.0034       1      69 [.    1373    1442 ..    1373    1507 .. 0.83
   5 !   14.7   0.0   0.00016     0.034       1      25 [.    1755    1788 ..    1755    1860 .. 0.72
   6 ?    4.6   0.4      0.21        46       2      32 ..    2066    2094 ..    2066    2227 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.032
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.......g 25 
                 Ill G pG+GKt l +  +++lg+       +
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELGLastmvtlH 324
                 89***************999986655544442 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00085
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf...gvnlrdvakenglllevdpe 44 
                 Ill G  G GKtt+ + L+++lg+   +vnl++    ++ll ++ p 
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLGYklvVVNLSQQSEVGDLLGSFKPI 676
                 89********************9999999999998888888888887 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.03
      AAA_18    1 IlltGtpGvGKttlakeLskrlgf.............gvnlrd 30  
                  +l+ G+  +GKt++ ++L++  g+              + l++
  KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLARYSGNkcvrinnhehtdlQEYLGS 1122
                  7899**************9876656666554444444344444 PP

  == domain 4  score: 17.9 bits;  conditional E-value: 1.6e-05
      AAA_18    1 IlltGtpGvGKttlakeLskrlgf...gvnlrdvakenglllevdpealdeskrldedkldklldaleenss 69  
                  +ll G  G+GKtt+++ L+++ +     vn  ++   ++l   + p   ++  ++ e  +++ll+al  +++
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFAKklfTVNAHQNTETGDLIGAQRPV--RNRAEVAEILMQALLKALSLCDK 1442
                  7899**************99852257899999999999999999999..99999999999999999887766 PP

  == domain 5  score: 14.7 bits;  conditional E-value: 0.00016
      AAA_18    1 IlltGtpGvGKttlakeLskrlgf.........g 25  
                  Ill G pGvGKttl  +L++ ++          +
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVCNQsltrinlseH 1788
                  89****************9987334664444441 PP

  == domain 6  score: 4.6 bits;  conditional E-value: 0.21
      AAA_18    2 lltGtpGvGKttlakeLskrlgfgvnlrdva 32  
                  ll G +G+GKt l ++++     g +l  + 
  KHJ30857.1 2066 LLVGLSGSGKTALLNHIAAII--GKKLVNLS 2094
                  589************996654..33333333 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0    0.0003     0.065      12     123 ..     280     390 ..     271     418 .. 0.77
   2 !   12.8   0.0   0.00034     0.073       9      44 ..     614     649 ..     608     670 .. 0.84
   3 !   10.0   0.0    0.0024      0.51      10     126 ..    1065    1177 ..    1057    1215 .. 0.74
   4 !   15.7   0.0   4.3e-05    0.0093       6      47 ..    1354    1395 ..    1350    1413 .. 0.83
   5 ?    6.4   0.0     0.031       6.6      14      48 ..    1744    1778 ..    1733    1798 .. 0.77
   6 ?    3.8   0.0      0.19        42      14      43 ..    2054    2083 ..    2049    2097 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.0003
                      HHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS-TTCHHHHHHE.BSSSSSTTTSS-BEHHHHHT..TTSEEEEETG CS
  Sigma54_activat  12 leqikkvaktdlsvlitGesGtGKellaraiheaskrkekpfvavncaaipeelleseLFG.hekGaFtGAekekkGlfeka..dgGtlfLDei 102
                      +e+ +++  +++++l++G  G+GK+ll +   ++   +++ +v++      e+  +  L G ++ G+  G+ + k G + +a  +g  +f+++i
       KHJ30857.1 280 MENFAEALLSSSPILLHGLPGSGKTLLVNDFARELGLAST-MVTLHLN---EQTDAKVLIGvYATGSNPGSFEWKPGVLTTAvkEGRWIFIEDI 369
                      67778889999*****************998887765544.6666544...44444455553678888888899*****998545678****** PP

                      GGS-HHHHHHHHHHHHHSEEE CS
  Sigma54_activat 103 gelplelQekLlrvlqegeve 123
                       + p ++ + +l +++++e++
       KHJ30857.1 370 DRAPNDVISLILSLVERRELH 390
                      ****************99864 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 0.00034
                      HHHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHH CS
  Sigma54_activat   9 kelleqikkvaktdlsvlitGesGtGKellaraihe 44 
                      k+lleqi +++ ++ ++l+ Ge+G GK+++ +++ +
       KHJ30857.1 614 KRLLEQIGAAIIYSEPILLIGETGIGKTTVVQQLAD 649
                      7899*************************9998755 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.0024
                       HHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS-TTCHHHHHHEBSSSSSTTTSS-BEHHHHHT..TTSEEEE CS
  Sigma54_activat   10 elleqikkvaktdlsvlitGesGtGKellaraiheaskrkekpfvavncaaipeelleseLFGhekGaFtGAekekkGlfeka..dgGtlfL 99  
                       ++l+ ++++ + + +vli+G + +GK+ + + + + s    ++ v++n  + ++  l +e  G    +  G  + ++Gl+ +a   g  + L
       KHJ30857.1 1065 NILNLVRAISTRRYPVLIQGPTSSGKTSMIEYLARYSG---NKCVRINNHEHTD--L-QEYLGSYVSTSDGNLTFQEGLLIQAlrRGHWIIL 1150
                       5667788888899**************99999988877...5567777655433..3.3445666667788888889988887545668999 PP

                       ETGGGS-HHHHHHHHHHHHHSEEESBT CS
  Sigma54_activat  100 DeigelplelQekLlrvlqegevervG 126 
                       De++  p+++ e L r+l++++   + 
       KHJ30857.1 1151 DELNLAPTDVLEALNRLLDDNREILIP 1177
                       999999999999999999887655555 PP

  == domain 4  score: 15.7 bits;  conditional E-value: 4.3e-05
                       HHHHHHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHHST CS
  Sigma54_activat    6 ealkelleqikkvaktdlsvlitGesGtGKellaraiheask 47  
                       +a+++l+  ++++++++ +vl++Ge+G+GK+++ +++ e+  
       KHJ30857.1 1354 QAIQRLYILVSHAIQNNEPVLLVGETGCGKTTVCQMLAESFA 1395
                       7889999999************************99877544 PP

  == domain 5  score: 6.4 bits;  conditional E-value: 0.031
                       HHHHHCTSSS-EEEECSTTSSHHHHHHHHHHHSTT CS
  Sigma54_activat   14 qikkvaktdlsvlitGesGtGKellaraiheaskr 48  
                       +i ++ + + ++l++G+ G+GK++l +a+ +  ++
       KHJ30857.1 1744 RIVRALQVRKPILLEGNPGVGKTTLITALARVCNQ 1778
                       5677889999*************999888776553 PP

  == domain 6  score: 3.8 bits;  conditional E-value: 0.19
                       HHHHHCTSSS-EEEECSTTSSHHHHHHHHH CS
  Sigma54_activat   14 qikkvaktdlsvlitGesGtGKellaraih 43  
                       ++  ++++++++l++G sG+GK+ l ++i 
       KHJ30857.1 2054 SVMICIQQNIPCLLVGLSGSGKTALLNHIA 2083
                       556678999**************9887765 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   0.00031     0.066       3      46 ..     276     317 ..     274     323 .. 0.84
   2 !   17.2   0.0   1.8e-05    0.0039      11      47 ..     613     656 ..     606     660 .. 0.73
   3 ?    4.2   0.0      0.19        40      21      48 ..    1076    1108 ..    1058    1123 .. 0.73
   4 !   11.6   0.0   0.00094       0.2      18      44 ..    1367    1395 ..    1345    1403 .. 0.73
   5 !   11.4   0.0    0.0011      0.25      15      44 ..    1746    1777 ..    1731    1814 .. 0.83
   6 ?    4.3   0.0      0.17        37      21      46 ..    2063    2089 ..    2043    2112 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.00031
                 SHHHHHHHHHHHHHCHTEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE   3 seeetealgkklakalgdvilLeGdLGaGKTtlvrglakalgve 46 
                 s+ ++e+++++l +  ++ ilL+G  G+GKT lv  +a++lg++
  KHJ30857.1 276 SNMNMENFAEALLS--SSPILLHGLPGSGKTLLVNDFARELGLA 317
                 56678889999977..778**********************986 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 1.8e-05
                 HHHHHHCH......TEEEEEEESTTSSHHHHHHHHHHHTT--.- CS
        TsaE  11 gkklakal......gdvilLeGdLGaGKTtlvrglakalgve.e 47 
                 +k+l +++      ++ ilL G+ G GKTt v++la +lg++  
  KHJ30857.1 613 AKRLLEQIgaaiiySEPILLIGETGIGKTTVVQQLADSLGYKlV 656
                 45555544322244455**********************99853 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.19
                  E...EEEEESTTSSHHHHHHHHHHHTT--..-- CS
        TsaE   21 v...ilLeGdLGaGKTtlvrglakalgve..ev 48  
                      +l++G+  +GKT ++  la+  g +  ++
  KHJ30857.1 1076 RrypVLIQGPTSSGKTSMIEYLARYSGNKcvRI 1108
                  134599*****************9988765555 PP

  == domain 4  score: 11.6 bits;  conditional E-value: 0.00094
                  H..TEEEEEEESTTSSHHHHHHHHHHHTT CS
        TsaE   18 l..gdvilLeGdLGaGKTtlvrglakalg 44  
                  +  ++ +lL G+ G+GKTt ++ la+++ 
  KHJ30857.1 1367 IqnNEPVLLVGETGCGKTTVCQMLAESFA 1395
                  233445*******************9885 PP

  == domain 5  score: 11.4 bits;  conditional E-value: 0.0011
                  HHCH..TEEEEEEESTTSSHHHHHHHHHHHTT CS
        TsaE   15 akal..gdvilLeGdLGaGKTtlvrglakalg 44  
                   +al  ++ ilLeG+ G+GKTtl+ +la+ ++
  KHJ30857.1 1746 VRALqvRKPILLEGNPGVGKTTLITALARVCN 1777
                  333333556******************99875 PP

  == domain 6  score: 4.3 bits;  conditional E-value: 0.17
                  E.EEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE   21 v.ilLeGdLGaGKTtlvrglakalgve 46  
                  +  lL G  G+GKT+l  ++a+ +g +
  KHJ30857.1 2063 IpCLLVGLSGSGKTALLNHIAAIIGKK 2089
                  24799999************9998866 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1      0.24        52     114     154 ..     279     315 ..     226     324 .. 0.77
   2 !   12.2   0.0   0.00033     0.071      38     150 ..     537     648 ..     521     659 .. 0.71
   3 !   17.2   0.0   9.7e-06    0.0021     106     191 ..    1054    1136 ..    1049    1153 .. 0.76
   4 !   11.2   0.1   0.00066      0.14     100     156 ..    1342    1397 ..    1288    1436 .. 0.74
   5 !   11.9   0.0   0.00039     0.085     104     164 ..    1727    1787 ..    1670    1797 .. 0.85
   6 ?    6.3   0.0      0.02       4.4     126     166 ..    2059    2099 ..    2038    2110 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.24
       T2SSE 114 lkekiaevlrkavrerglilvsGgTgsGKttllyallkein 154
                 + e++ae+l +       il+ G  gsGKt l++    e+ 
  KHJ30857.1 279 NMENFAEALLS----SSPILLHGLPGSGKTLLVNDFARELG 315
                 33444444444....479**************998877765 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 0.00033
       T2SSE  38 eveelekaalerlisriaalakldiseerplqdarlpekgvrlrvvl..lPvvagealviRkksakeltlddlgaeealkekiaevlrkavrerglilv 134
                 +++ ++ +  e +is ia +++ d ++ +  + a++p k ++l+ +l    +  +++l +R+++  + tl+ + a+  +++++ e + +a+     il+
  KHJ30857.1 537 AASVPNLDVRESVISLIAEAMHIDPQQAKFYITAHVP-KYEELQRSLsiGRAYITKNLNLRQNKFTS-TLRPF-ANTVFAKRLLEQIGAAIIYSEPILL 632
                 5556667788899999999999999999********9.66666554410445555999999444333.33333.3445555666666666666699*** PP

       T2SSE 135 sGgTgsGKttllyall 150
                  G Tg GKtt++  l 
  KHJ30857.1 633 IGETGIGKTTVVQQLA 648
                 **********987665 PP

  == domain 3  score: 17.2 bits;  conditional E-value: 9.7e-06
       T2SSE  106 ddlgaeealkekiaevlrkavrerglilvsGgTgsGKttllyallkeinksderivtvEDpvEiqleganqvqlnakkakvtfadl 191 
                  ++++ +++++ +i +++r+  ++r+ +l+ G+T+sGKt ++  l  +  ++    v +     ++l++   + + ++++++tf+++
  KHJ30857.1 1054 QNYIRTPSVDRNILNLVRAISTRRYPVLIQGPTSSGKTSMIEYLARYSGNK---CVRINNHEHTDLQEYLGSYVSTSDGNLTFQEG 1136
                  6899999************999****************9987666555444...45555555666777777777777777777664 PP

  == domain 4  score: 11.2 bits;  conditional E-value: 0.00066
       T2SSE  100 akeltlddlgaeealkekiaevlrkavrerglilvsGgTgsGKttllyallkeinks 156 
                  +   + ++++ ++a  +++  ++++a++++  +l+ G Tg GKtt+  +l + ++k+
  KHJ30857.1 1342 NLTQNSQEIVWTQAI-QRLYILVSHAIQNNEPVLLVGETGCGKTTVCQMLAESFAKK 1397
                  333344445444444.44556889**********************99988887766 PP

  == domain 5  score: 11.9 bits;  conditional E-value: 0.00039
       T2SSE  104 tlddlgaeealkekiaevlrkavrerglilvsGgTgsGKttllyallkeinksderivtvE 164 
                  t +++++e+ +++  +  + +a++ r+ il+ G  g GKttl+ al    n+s  ri + E
  KHJ30857.1 1727 TNQNYAFEAPTTKLNSMRIVRALQVRKPILLEGNPGVGKTTLITALARVCNQSLTRINLSE 1787
                  55778887777777777778888************************99999988887655 PP

  == domain 6  score: 6.3 bits;  conditional E-value: 0.02
       T2SSE  126 vrerglilvsGgTgsGKttllyallkeinksderivtvEDp 166 
                  ++++   l+ G  gsGKt ll+ + ++i k+  ++ +  D+
  KHJ30857.1 2059 IQQNIPCLLVGLSGSGKTALLNHIAAIIGKKLVNLSLNSDT 2099
                  4666777999******************9998887776666 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.099        21      10      39 ..     284     311 ..     279     336 .. 0.80
   2 ?    2.6   0.0      0.46     1e+02      21      42 ..     630     651 ..     618     708 .. 0.79
   3 !    9.1   0.0    0.0046      0.99      11     114 ..    1071    1170 ..    1067    1176 .. 0.79
   4 !    9.5   0.0    0.0034      0.74      10     114 ..    1363    1526 ..    1360    1534 .. 0.56
   5 !   16.6   0.0   2.3e-05     0.005      21     114 ..    1755    1848 ..    1744    1855 .. 0.83
   6 ?    7.1   0.0     0.019       4.1      20      44 ..    2064    2088 ..    2055    2102 .. 0.83
   7 ?   -1.1   0.0       6.3   1.4e+03      81     115 ..    2196    2243 ..    2163    2248 .. 0.72

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.099
      AAA_30  10 vealltsgdrvavltGpAGtGKttalkalr 39 
                 +eall+s+    +l+G +G+GKt +++  +
  KHJ30857.1 284 AEALLSSS--PILLHGLPGSGKTLLVNDFA 311
                 66777777..589**********9998774 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.46
      AAA_30  21 avltGpAGtGKttalkalreaw 42 
                  +l G  G GKtt++++l++ +
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSL 651
                 5789**********99987655 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.0046
      AAA_30   11 ealltsgdrvavltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLaeelgieastiakllkrlk..grarlepgtllivDEagmvdtkql 105 
                  +a+ ++++  ++++Gp  +GKt +++ l++   ++         ++    +L+e lg   st +  l+ ++    ++l++g+ +i DE  ++ t+ l
  KHJ30857.1 1071 RAI-STRRYPVLIQGPTSSGKTSMIEYLARYSGNKCV-----RINNHEHTDLQEYLGSYVSTSDGNLTFQEglLIQALRRGHWIILDELNLAPTDVL 1161
                  444.44556899*************999988776643.....335666779******999999998877778944579999**************** PP

      AAA_30  106 aallkaaek 114 
                  +al + +++
  KHJ30857.1 1162 EALNRLLDD 1170
                  ***998877 PP

  == domain 4  score: 9.5 bits;  conditional E-value: 0.0034
      AAA_30   10 vealltsgdrvavltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLa.......................eelgieastiakllkrlk.. 81  
                  v +++++++  ++l+G  G GKtt+ + l+e ++++ ++v   A++++   +L                                            
  KHJ30857.1 1363 VSHAIQNNE-PVLLVGETGCGKTTVCQMLAESFAKKLFTVN--AHQNTETGDLIgaqrpvrnraevaeilmqallkaL----------------Slc 1440
                  566777775.899******************9998874443..22222222222122222222222222223333330................233 PP

      AAA_30   82 ......................................................grarlepgtllivDEagmvdtkqlaallkaaek 114 
                                                                          +++++g+ ++ DE+++++ + l++l + +e+
  KHJ30857.1 1441 dkditdkydinillksyqslreeevskipseihktinsnrakmnalfewcdgglV-QAMREGQFFLLDEISLAGDAILERLNSVLET 1526
                  3333333344444444444444444555555555555555888888888888642.3455668888888888888888888777666 PP

  == domain 5  score: 16.6 bits;  conditional E-value: 2.3e-05
      AAA_30   21 avltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLaeelgieastiakllkrlk...grarlepgtllivDEagmvdtkqlaallkaaek 114 
                   +l+G +G GKtt+++al+++ +++  + i l+  +   +  + ++ ++ + i ++  r +   +  ++++g+ ++ DE+ ++ ++ l+ l + +++
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVCNQSL-TRINLSEHSDLTDLFGSDVPVANAEICQFEWRDApflQ--AMQKGEWVLLDEMNLAPQSVLEGLNACLDH 1848
                  689********************984.668899************99999999999977776432..46667*********9999998888776665 PP

  == domain 6  score: 7.1 bits;  conditional E-value: 0.019
      AAA_30   20 vavltGpAGtGKttalkalreawea 44  
                   ++l+G  G+GKt +l+++++++ +
  KHJ30857.1 2064 PCLLVGLSGSGKTALLNHIAAIIGK 2088
                  5789***************999865 PP

  == domain 7  score: -1.1 bits;  conditional E-value: 6.3
      AAA_30   81 k.............grarlepgtllivDEagmvdtkqlaallkaaeka 115 
                  +               ++le+g+ li D a +++++ l+++ + +e +
  KHJ30857.1 2196 DtqigiqfewvdgaLVKALEEGQWLILDNANLCSASVLDRINSLLEPN 2243
                  2344444444445423578899****************9998887765 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.63   1.4e+02      13      44 ..     292     323 ..     281     341 .. 0.79
   2 ?    8.5   0.1     0.013       2.8       5      33 ..     621     649 ..     617     667 .. 0.85
   3 ?    2.9   0.0      0.69   1.5e+02      14      50 ..    1080    1114 ..    1076    1167 .. 0.80
   4 !   17.8   0.0   1.7e-05    0.0038       4      37 ..    1363    1396 ..    1362    1481 .. 0.83
   5 ?    8.4   0.0     0.014         3      15      46 ..    1756    1788 ..    1748    1821 .. 0.80
   6 !   13.8   0.1   0.00029     0.063       4     110 ..    2055    2192 ..    2052    2202 .. 0.65

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.63
                 EEEEEESTTSSHHHHHHHHTTSS--SEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  13 kvaivGenGaGKStLlkllagllkpteGeill 44 
                  + + G  G+GK+ L++ +a++l  ++  ++l
  KHJ30857.1 292 PILLHGLPGSGKTLLVNDFARELGLASTMVTL 323
                 57799************999988766655554 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.013
                 EEEEETTSEEEEEESTTSSHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   5 slklkegekvaivGenGaGKStLlkllag 33 
                    +  +e + ++Ge+G GK+t+++ la 
  KHJ30857.1 621 GAAIIYSEPILLIGETGIGKTTVVQQLAD 649
                 55666788899************998875 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.69
                  EEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGG CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   14 vaivGenGaGKStLlkllagllkpteGeilldgkdlk 50  
                  v i G++ +GK+++++ la+ + ++  +i  ++++ +
  KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLARYSGNKCVRI--NNHEHT 1114
                  5789**************99876554444..444444 PP

  == domain 4  score: 17.8 bits;  conditional E-value: 1.7e-05
                  EEEEEETTSEEEEEESTTSSHHHHHHHHTTSS-- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran    4 vslklkegekvaivGenGaGKStLlkllagllkp 37  
                  vs  ++++e v +vGe+G+GK+t++++la+   +
  KHJ30857.1 1363 VSHAIQNNEPVLLVGETGCGKTTVCQMLAESFAK 1396
                  67789999********************987765 PP

  == domain 5  score: 8.4 bits;  conditional E-value: 0.014
                  EEEESTTSSHHHHHHHHTTSS--SEEEEEET.T CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.x RF
    ABC_tran   15 aivGenGaGKStLlkllagllkpteGeilld.g 46  
                   + G+ G GK+tL+ +la+  ++   +i+l   
  KHJ30857.1 1756 LLEGNPGVGKTTLITALARVCNQSLTRINLSeH 1788
                  6779***************99988888877633 PP

  == domain 6  score: 13.8 bits;  conditional E-value: 0.00029
                  EEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEET.TCEGGG........................B-HHHCCHCEEEE-SS--S-TTSB CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxx........................xxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran    4 vslklkegekvaivGenGaGKStLlkllagllkpteGeilld.gkdlke........................qeleslrkeigvlpqepqlfpelt 75  
                  v + ++++    +vG +G+GK+ Ll+ +a    ++  ++ l+ ++d+ +                         + + l+  ++ lpqe++  +e++
  KHJ30857.1 2055 VMICIQQNIPCLLVGLSGSGKTALLNHIAAIIGKKLVNLSLNsDTDTMDliggyeqadprrtfaslceeletlMNQKLLSTLSSQLPQEAKYLEEMK 2151
                  556677777788******************9988666665553333333666644444444444455444444455666666666666666666665 PP

                  HHHH........HHHTCHHHHHHHSTTGGTTCBGESTTSGGS- CS
                  xxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   76 vren........esdeeiekalsklglkelkdtvvksspssLS 110 
                  + e+        +  ++++++ s++++++++d  +  + ++LS
  KHJ30857.1 2152 NNERlpfqnmlsNLAQKVSQIGSQVNIQDFEDLAQ--RFHTLS 2192
                  55558888888777777888888888888666554..556666 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0     0.026       5.7       1      23 [.     293     315 ..     293     336 .. 0.83
   2 !   10.2   0.0    0.0035      0.76       1      26 [.     630     655 ..     630     668 .. 0.84
   3 ?    4.3   0.0      0.24        52       1      26 [.    1080    1105 ..    1080    1125 .. 0.81
   4 !   14.3   0.0   0.00019     0.041       1      27 [.    1373    1400 ..    1373    1417 .. 0.82
   5 ?    8.3   0.0     0.014         3       1      26 [.    1755    1780 ..    1755    1793 .. 0.82
   6 ?    5.7   0.0     0.086        19       2      26 ..    2066    2090 ..    2065    2153 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.026
  RNA_helicase   1 iwlyGpsgeGKStlakeLakall 23 
                   i+l+G +g GK++l++++a++l 
    KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELG 315
                   689*****************997 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0035
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   i+l G++g+GK+t++++La++l  kl
    KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLGYKL 655
                   6899***************9998665 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.24
  RNA_helicase    1 iwlyGpsgeGKStlakeLakallkkl 26  
                    ++++Gp+  GK++++++La+   +k 
    KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLARYSGNKC 1105
                    6799**************99776655 PP

  == domain 4  score: 14.3 bits;  conditional E-value: 0.00019
  RNA_helicase    1 iwlyGpsgeGKStlakeLakallkkl.k 27  
                    ++l+G++g+GK+t+++ La++++kkl  
    KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFAKKLfT 1400
                    6799*******************99841 PP

  == domain 5  score: 8.3 bits;  conditional E-value: 0.014
  RNA_helicase    1 iwlyGpsgeGKStlakeLakallkkl 26  
                    i+l G++g+GK+tl++ La+   ++l
    KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVCNQSL 1780
                    6799*************998877666 PP

  == domain 6  score: 5.7 bits;  conditional E-value: 0.086
  RNA_helicase    2 wlyGpsgeGKStlakeLakallkkl 26  
                    +l+G sg GK+ l +++a+ + kkl
    KHJ30857.1 2066 LLVGLSGSGKTALLNHIAAIIGKKL 2090
                    689*************999999887 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.066        14      25      43 ..     293     311 ..     280     351 .. 0.81
   2 ?    3.1   0.0      0.24        51      22      44 ..     627     649 ..     611     665 .. 0.81
   3 ?    3.8   0.0      0.15        31     110     158 ..    1148    1197 ..    1125    1209 .. 0.86
   4 ?    5.0   0.0     0.062        13      21      45 ..    1369    1393 ..    1350    1426 .. 0.72
   5 ?    5.2   0.0     0.055        12     101     202 ..    1494    1594 ..    1439    1599 .. 0.78
   6 ?    6.4   0.0     0.024       5.2      24      48 ..    1754    1778 ..    1742    1811 .. 0.80
   7 !    7.7   0.0    0.0099       2.1     110     163 ..    1826    1880 ..    1819    1891 .. 0.90
   8 ?    3.7   0.0      0.16        36      22      48 ..    2062    2088 ..    2045    2110 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.066
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +ll G pGsGKt+l + ++
    KHJ30857.1 293 ILLHGLPGSGKTLLVNDFA 311
                   89************87654 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.24
  Mg_chelatase  22 gHnlllvGppGsGKtmlakrlps 44 
                   +  +ll+G  G GKt + ++l+ 
    KHJ30857.1 627 SEPILLIGETGIGKTTVVQQLAD 649
                   5569*************999875 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.15
  Mg_chelatase  110 LfLDElpefkrkvlevLRePled.gevtisrakakvefparfqlvaamNp 158 
                    ++LDEl    ++vle+L + l+d +e+ i  +++ v+    f+l a+ Np
    KHJ30857.1 1148 IILDELNLAPTDVLEALNRLLDDnREILIPETQEVVRPHDGFMLFATQNP 1197
                    78*******************86268999999999998899******998 PP

  == domain 4  score: 5.0 bits;  conditional E-value: 0.062
  Mg_chelatase   21 GgHnlllvGppGsGKtmlakrlpsl 45  
                     +  +llvG  G+GKt + + l++ 
    KHJ30857.1 1369 NNEPVLLVGETGCGKTTVCQMLAES 1393
                    45569***********887776543 PP

  == domain 5  score: 5.2 bits;  conditional E-value: 0.055
  Mg_chelatase  101 eislahnGvLf.LDElpefkrkvlevLRePledge.vtisrakakvefpa...rfqlvaamNpcpcgklkdkekectcsekeierYlsklsgpll 190 
                     +   ++G +f LDE++     +le L + le+++ + ++ +  + +f      fq+ a+mNp   g+++++    + s++ ++r+++    pl 
    KHJ30857.1 1494 LVQAMREGQFFlLDEISLAGDAILERLNSVLETERtILLAEKGIEDSFVKavdGFQIFATMNP--GGDYGKR----ELSPALRNRFTEIWVPPLS 1582
                    4555567776637*******************87526666666666665412269*******8..5888844....4678889999999999999 PP

  Mg_chelatase  191 dRidlqvevkkl 202 
                    d  d+++ v++ 
    KHJ30857.1 1583 DQNDIHIIVQSK 1594
                    999999999654 PP

  == domain 6  score: 6.4 bits;  conditional E-value: 0.024
  Mg_chelatase   24 nlllvGppGsGKtmlakrlpsllpp 48  
                     +ll G+pG GKt l+++l+ +  +
    KHJ30857.1 1754 PILLEGNPGVGKTTLITALARVCNQ 1778
                    589*************999887654 PP

  == domain 7  score: 7.7 bits;  conditional E-value: 0.0099
  Mg_chelatase  110 LfLDElpefkrkvlevLRePled.gevtisrakakvefparfqlvaamNpcpcgk 163 
                    ++LDE+    ++vle L   l++ gev i++ ++k++   +f + aa Np   g+
    KHJ30857.1 1826 VLLDEMNLAPQSVLEGLNACLDHrGEVYITQLNKKFKCHPDFSIFAAQNPHHQGS 1880
                    579******************86389************************88775 PP

  == domain 8  score: 3.7 bits;  conditional E-value: 0.16
  Mg_chelatase   22 gHnlllvGppGsGKtmlakrlpsllpp 48  
                    +   llvG +GsGKt l + +++++ +
    KHJ30857.1 2062 NIPCLLVGLSGSGKTALLNHIAAIIGK 2088
                    55579***************9999865 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0    0.0071       1.5       2      24 ..     292     314 ..     291     319 .. 0.90
   2 !   12.4   0.1   0.00052      0.11       2      24 ..     629     651 ..     628     654 .. 0.90
   3 ?   -0.9   0.0       6.1   1.3e+03      88     141 ..     687     742 ..     685     755 .. 0.83
   4 ?    0.8   0.0       1.9   4.1e+02       2      21 ..    1079    1098 ..     985    1127 .. 0.60
   5 !   10.5   0.0     0.002      0.43       2      26 ..    1372    1396 ..    1371    1405 .. 0.89
   6 !   10.0   0.0    0.0029      0.62       2      22 ..    1754    1774 ..    1753    1781 .. 0.87
   7 !   10.0   0.1    0.0027      0.58       3      25 ..    2065    2087 ..    2064    2095 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0071
                 CEEEEC-TTTCHHHHHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqklalaw 24 
                 +++l+G +GsGKT L+  +a+++
  KHJ30857.1 292 PILLHGLPGSGKTLLVNDFAREL 314
                 689***************99987 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.00052
                 CEEEEC-TTTCHHHHHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqklalaw 24 
                 +++l Ge G+GKTt +q+la+ +
  KHJ30857.1 629 PILLIGETGIGKTTVVQQLADSL 651
                 689****************9976 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 6.1
                 E-STT-SS-TCH...........HHHHHCTTTTT--EEEEEEECCCHHHHCTTSSC CS
       NACHT  88 DglDelvtdlgq..kekqpvrtlLselirkkllpeasllltvrpralrdleeqlee 141
                 D +Del t  g    ++q+  +lL + +rk+   + s ll   p+  + + +++++
  KHJ30857.1 687 DEFDELFTLTGLsaTRNQKYLELLDKCFRKEQWNKFSKLLCEAPKMFETILRTMAK 742
                 88999999888888999999**********99999999988888777776666655 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 1.9
                  CEEEEC-TTTCHHHHHHHHH CS
       NACHT    2 lvilqGeaGsGKTtLlqkla 21  
                  +v++qG+  sGKT +++ la
  KHJ30857.1 1079 PVLIQGPTSSGKTSMIEYLA 1098
                  34455555555555444443 PP

  == domain 5  score: 10.5 bits;  conditional E-value: 0.002
                  CEEEEC-TTTCHHHHHHHHHHHHCT CS
       NACHT    2 lvilqGeaGsGKTtLlqklalawae 26  
                  +v+l Ge G+GKTt  q la+  a+
  KHJ30857.1 1372 PVLLVGETGCGKTTVCQMLAESFAK 1396
                  699***************9998876 PP

  == domain 6  score: 10.0 bits;  conditional E-value: 0.0029
                  CEEEEC-TTTCHHHHHHHHHH CS
       NACHT    2 lvilqGeaGsGKTtLlqklal 22  
                  +++l+G +G+GKTtL+  la+
  KHJ30857.1 1754 PILLEGNPGVGKTTLITALAR 1774
                  689*************99987 PP

  == domain 7  score: 10.0 bits;  conditional E-value: 0.0027
                  EEEEC-TTTCHHHHHHHHHHHHC CS
       NACHT    3 vilqGeaGsGKTtLlqklalawa 25  
                  ++l G +GsGKT+Ll ++a  + 
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHIAAIIG 2087
                  7899**************98765 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0     0.008       1.7      19      50 ..     293     324 ..     288     329 .. 0.90
   2 ?    4.3   0.0     0.098        21      19      50 ..     630     659 ..     625     664 .. 0.81
   3 ?    6.8   0.0     0.017       3.6      14      52 ..    1077    1111 ..    1067    1171 .. 0.78
   4 !    9.2   0.0    0.0031      0.67      19      41 ..    1373    1395 ..    1364    1405 .. 0.84
   5 ?    6.2   0.0     0.026       5.7      18      49 ..    1754    1783 ..    1742    1790 .. 0.82
   6 ?    5.3   0.0      0.05        11      19      49 ..    2065    2093 ..    2057    2136 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.008
  Zeta_toxin  19 illgGqpGAGKselaellkdelerqgnvvrld 50 
                 ill G pG+GK+ l +++++el+ ++ +v+l 
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELGLASTMVTLH 324
                 7999******************9999999876 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.098
  Zeta_toxin  19 illgGqpGAGKselaellkdelerqgnvvrld 50 
                 ill G +G GK+++ + l+d+l+   + v+++
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLG--YKLVVVN 659
                 7899******************5..4444444 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.017
  Zeta_toxin   14 erPklillgGqpGAGKselaellkdelerqgnvvrldpD 52  
                  ++P  +l+ G + +GK++++e+l+++   ++++vr++  
  KHJ30857.1 1077 RYP--VLIQGPTSSGKTSMIEYLARYS--GNKCVRINNH 1111
                  455..5667*****************8..9******964 PP

  == domain 4  score: 9.2 bits;  conditional E-value: 0.0031
  Zeta_toxin   19 illgGqpGAGKselaellkdele 41  
                  +ll+G +G+GK+++ ++l+++++
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFA 1395
                  79*****************9984 PP

  == domain 5  score: 6.2 bits;  conditional E-value: 0.026
  Zeta_toxin   18 lillgGqpGAGKselaellkdelerqgnvvrl 49  
                   ill G pG GK++l+++l++    +++  r+
  KHJ30857.1 1754 PILLEGNPGVGKTTLITALARVC--NQSLTRI 1783
                  5899***************9988..5555555 PP

  == domain 6  score: 5.3 bits;  conditional E-value: 0.05
  Zeta_toxin   19 illgGqpGAGKselaellkdelerqgnvvrl 49  
                   ll+G +G+GK++l++ +++ +  +++ v l
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHIAAII--GKKLVNL 2093
                  5899**************9998..4555544 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0       2.8     6e+02      15      38 ..     284     307 ..     271     334 .. 0.82
   2 !   11.7   0.0   0.00099      0.21       1      54 [.     607     660 ..     607     677 .. 0.84
   3 ?    5.6   0.0     0.074        16      13      66 ..    1069    1121 ..    1062    1140 .. 0.72
   4 !   20.5   0.0   1.9e-06   0.00041       4      54 ..    1353    1401 ..    1351    1446 .. 0.86
   5 ?    1.3   0.0       1.6   3.4e+02      13      44 ..    1744    1775 ..    1735    1800 .. 0.77
   6 ?   -1.2   0.0       9.1     2e+03      19      39 ..    2060    2080 ..    2051    2113 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 2.8
                      HHHHT-SS-EEEEEETT--HHHHH CS
  Sigma54_activ_2  15 eqaaqsklpvfltGekGsgkelvA 38 
                      ++a  s++p++l G +Gsgk+l  
       KHJ30857.1 284 AEALLSSSPILLHGLPGSGKTLLV 307
                      55667899************9865 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00099
                      X---HHHHHHHHHHHHHHT-SS-EEEEEETT--HHHHHHCC--TTS-EE--SST CS
  Sigma54_activ_2   1 lgasaaiqelkerLeqaaqsklpvfltGekGsgkelvArlLhknsgpwleifvv 54 
                      ++++ + ++l e++ +a   + p++l+Ge G gk++v + L+++ g +l ++++
       KHJ30857.1 607 FANTVFAKRLLEQIGAAIIYSEPILLIGETGIGKTTVVQQLADSLGYKLVVVNL 660
                      57888899999******************************9988776665555 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.074
                       HHHHHHT-SS-EEEEEETT--HHHHHHCC--TTS-EE--SSTT.HHHH-HHHHHH CS
  Sigma54_activ_2   13 rLeqaaqsklpvfltGekGsgkelvArlLhknsgpwleifvve.rlaklpldlle 66  
                        + +++ +  pv++ G+  sgk+++ ++L+  sg+  + ++++ + ++  ++ l 
       KHJ30857.1 1069 LVRAISTRRYPVLIQGPTSSGKTSMIEYLARYSGN--KCVRINnHEHTDLQEYLG 1121
                       567889999*********************99988..333333033345555555 PP

  == domain 4  score: 20.5 bits;  conditional E-value: 1.9e-06
                       -HHHHHHHHHHHHHHT-SS-EEEEEETT--HHHHHHCC--TTS-EE--SST CS
  Sigma54_activ_2    4 saaiqelkerLeqaaqsklpvfltGekGsgkelvArlLhknsgpwleifvv 54  
                       ++aiq+l   +  a q++ pv+l+Ge G+gk++v ++L+++ ++  ++f+v
       KHJ30857.1 1353 TQAIQRLYILVSHAIQNNEPVLLVGETGCGKTTVCQMLAESFAK--KLFTV 1401
                       6899999999*****************************99888..45554 PP

  == domain 5  score: 1.3 bits;  conditional E-value: 1.6
                       HHHHHHT-SS-EEEEEETT--HHHHHHCC--T CS
  Sigma54_activ_2   13 rLeqaaqsklpvfltGekGsgkelvArlLhkn 44  
                       r+  a q   p++l G++G gk++   +L+  
       KHJ30857.1 1744 RIVRALQVRKPILLEGNPGVGKTTLITALARV 1775
                       5667789999************9988888655 PP

  == domain 6  score: -1.2 bits;  conditional E-value: 9.1
                       T-SS-EEEEEETT--HHHHHH CS
  Sigma54_activ_2   19 qsklpvfltGekGsgkelvAr 39  
                       q++ p +l+G  Gsgk+   +
       KHJ30857.1 2060 QQNIPCLLVGLSGSGKTALLN 2080
                       8999***********987655 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.067        15       7      33 ..     287     313 ..     281     324 .. 0.82
   2 ?    7.6   0.1     0.021       4.6       7      33 ..     624     650 ..     619     661 .. 0.83
   3 ?    0.3   0.0       3.8   8.1e+02       4      31 ..    1072    1098 ..    1070    1111 .. 0.82
   4 ?    7.3   0.0     0.026       5.5       8      37 ..    1368    1397 ..    1363    1409 .. 0.84
   5 !   11.6   0.0    0.0012      0.26       5      37 ..    1746    1779 ..    1743    1786 .. 0.83
   6 ?    6.6   0.0     0.043       9.4       9      36 ..    2061    2088 ..    2054    2101 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.067
      AAA_19   7 alkekvllvtaGpGtGKTrvlkhival 33 
                  l+++++l+ + pG+GKT +++   ++
  KHJ30857.1 287 LLSSSPILLHGLPGSGKTLLVNDFARE 313
                 47899*************999877665 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.021
      AAA_19   7 alkekvllvtaGpGtGKTrvlkhival 33 
                  + ++++l+++  G GKT+v+++    
  KHJ30857.1 624 IIYSEPILLIGETGIGKTTVVQQLADS 650
                 577899***************987765 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 3.8
      AAA_19    4 avealkekvllvtaGpGtGKTrvlkhiv 31  
                  a+  +++ ++l+ ++  +GKT +++   
  KHJ30857.1 1072 AI-STRRYPVLIQGPTSSGKTSMIEYLA 1098
                  55.6778899999**********98765 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.026
      AAA_19    8 lkekvllvtaGpGtGKTrvlkhivallvel 37  
                   +++++l+++  G+GKT+v ++  + + + 
  KHJ30857.1 1368 QNNEPVLLVGETGCGKTTVCQMLAESFAKK 1397
                  57899***************9998887665 PP

  == domain 5  score: 11.6 bits;  conditional E-value: 0.0012
      AAA_19    5 ve.alkekvllvtaGpGtGKTrvlkhivallvel 37  
                  v+    +k++l+ + pG GKT+++++  +++++ 
  KHJ30857.1 1746 VRaLQVRKPILLEGNPGVGKTTLITALARVCNQS 1779
                  55456789*****************999988776 PP

  == domain 6  score: 6.6 bits;  conditional E-value: 0.043
      AAA_19    9 kekvllvtaGpGtGKTrvlkhivallve 36  
                  ++ ++l+++  G+GKT +l+hi a++ +
  KHJ30857.1 2061 QNIPCLLVGLSGSGKTALLNHIAAIIGK 2088
                  5568999***************998765 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.055        12      36      62 ..     293     319 ..     277     336 .. 0.86
   2 ?    7.8   0.0     0.012       2.6      35      76 ..     629     670 ..     619     682 .. 0.82
   3 ?   -0.7   0.0       4.9   1.1e+03      78     153 ..     807     889 ..     804     893 .. 0.64
   4 ?    1.6   0.0      0.98   2.1e+02       7      58 ..    1054    1102 ..    1048    1116 .. 0.79
   5 !   12.8   0.0   0.00034     0.073      16      78 ..    1356    1415 ..    1345    1429 .. 0.83
   6 ?   -1.6   0.0       9.4     2e+03      78     126 ..    1494    1542 ..    1491    1575 .. 0.74
   7 !    9.1   0.0    0.0046         1      35      61 ..    1754    1780 ..    1740    1796 .. 0.83
   8 ?    0.3   0.1       2.4   5.1e+02      36      62 ..    2065    2091 ..    2060    2107 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.055
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklk 62 
                 +ll+G PG Gkt l +  a+elg    
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELGLAST 319
                 8*********************97655 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.012
      RuvB_N  35 hvllyGpPGlGkttlakiiakelgvklkitsgPvlekagdla 76 
                  +ll+G  G+Gktt+ + +a+ lg kl +      ++ gdl 
  KHJ30857.1 629 PILLIGETGIGKTTVVQQLADSLGYKLVVVNLSQQSEVGDLL 670
                 589*********************999887766666666665 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 4.9
      RuvB_N  78 lltnleekdvlfideihrlsr....aveevlysamedfrldivigkGpsarsikldlpkftlvga...ttragl..lssPlrdrf 153
                 +++ ++++d +++dei   s+    ++ ++ly++ e+ r  i+ ++G+  r +    p f + ga   +t +g   l   lr+rf
  KHJ30857.1 807 IIKAVRNGDWVLLDEINLASPdtleSISDLLYNSSEESRSIILPETGNIKRICA--NPSFRIFGAmnpATDVGKrdLPPSLRSRF 889
                 78889999********977642222577899**999999877777787766543..24444444411145555422444566666 PP

  == domain 4  score: 1.6 bits;  conditional E-value: 0.98
      RuvB_N    7 eeyigqekvkeklkifieaakkreealdhvllyGpPGlGkttlakiiakelg 58  
                  ++yi   +v  ++  +++a  +r+ +   vl++Gp   Gkt++ + +a+  g
  KHJ30857.1 1054 QNYIRTPSVDRNILNLVRAISTRRYP---VLIQGPTSSGKTSMIEYLARYSG 1102
                  56777777777777777777777765...8*************999987655 PP

  == domain 5  score: 12.8 bits;  conditional E-value: 0.00034
      RuvB_N   16 keklkifieaakkreealdhvllyGpPGlGkttlakiiakelgvklkitsgPvlekagdlaal 78  
                   ++l i+++ a + +e+   vll+G  G Gktt+++++a+ +  kl +  +    ++gdl++ 
  KHJ30857.1 1356 IQRLYILVSHAIQNNEP---VLLVGETGCGKTTVCQMLAESFAKKLFTVNAHQNTETGDLIGA 1415
                  56778888888777765...8**********************99999999999999998875 PP

  == domain 6  score: -1.6 bits;  conditional E-value: 9.4
      RuvB_N   78 lltnleekdvlfideihrlsraveevlysamedfrldivigkGpsarsi 126 
                  l++ ++e++ +++dei     a+ e l s +e  r  ++ +kG     +
  KHJ30857.1 1494 LVQAMREGQFFLLDEISLAGDAILERLNSVLETERTILLAEKGIEDSFV 1542
                  778899999********99999*****9999999988888888765554 PP

  == domain 7  score: 9.1 bits;  conditional E-value: 0.0046
      RuvB_N   35 hvllyGpPGlGkttlakiiakelgvkl 61  
                   +ll G PG+Gkttl + +a+  + +l
  KHJ30857.1 1754 PILLEGNPGVGKTTLITALARVCNQSL 1780
                  589************999998776655 PP

  == domain 8  score: 0.3 bits;  conditional E-value: 2.4
      RuvB_N   36 vllyGpPGlGkttlakiiakelgvklk 62  
                  +ll+G  G Gkt+l + ia+ +g kl 
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHIAAIIGKKLV 2091
                  599***********9999998887765 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0       1.8   3.8e+02     145     169 ..      58      82 ..      33      85 .. 0.88
   2 ?    4.7   0.0      0.09        19      33      56 ..     290     313 ..     281     337 .. 0.83
   3 ?    6.8   0.0     0.021       4.4      33      55 ..     627     649 ..     616     652 .. 0.87
   4 !   11.2   0.0   0.00095       0.2      20      59 ..    1357    1396 ..    1346    1413 .. 0.83
   5 ?    7.6   0.0     0.012       2.5      34      55 ..    1753    1774 ..    1732    1781 .. 0.87
   6 ?    6.1   0.0     0.035       7.6      18      55 ..    2048    2084 ..    2031    2094 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 1.8
      AAA_25 145 lvviDplsralggdensnsdvgalv 169
                 +v  D+++r  g++en+n++++a+ 
  KHJ30857.1  58 HVFADTCARWIGNQENRNNKIAAFA 82 
                 7888***************998875 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.09
      AAA_25  33 gelallaGapgtGKttlaldlala 56 
                  + +ll G pg+GKt l+ d a +
  KHJ30857.1 290 SSPILLHGLPGSGKTLLVNDFARE 313
                 6789*************9998875 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.021
      AAA_25  33 gelallaGapgtGKttlaldlal 55 
                  e +ll+G +g GKtt++ +la 
  KHJ30857.1 627 SEPILLIGETGIGKTTVVQQLAD 649
                 6789****************996 PP

  == domain 4  score: 11.2 bits;  conditional E-value: 0.00095
      AAA_25   20 pprrwlvkgllpagelallaGapgtGKttlaldlalavat 59  
                  +++  lv   +  +e +ll+G +g+GKtt++  la + a+
  KHJ30857.1 1357 QRLYILVSHAIQNNEPVLLVGETGCGKTTVCQMLAESFAK 1396
                  56666788889999*****************999988885 PP

  == domain 5  score: 7.6 bits;  conditional E-value: 0.012
      AAA_25   34 elallaGapgtGKttlaldlal 55  
                  + +ll G pg+GKttl + la 
  KHJ30857.1 1753 KPILLEGNPGVGKTTLITALAR 1774
                  6789***************996 PP

  == domain 6  score: 6.1 bits;  conditional E-value: 0.035
      AAA_25   18 pppprrwlvkgllpagelallaGapgtGKttlaldlal 55  
                  ++p+++  v+ ++  +  +ll+G +g+GKt+l+ ++a+
  KHJ30857.1 2048 RLPELES-VMICIQQNIPCLLVGLSGSGKTALLNHIAA 2084
                  5555553.3445678889***************99987 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       3.4   7.3e+02      48      70 ..     291     313 ..     269     322 .. 0.83
   2 ?    5.4   0.0     0.061        13      46      72 ..     626     656 ..     590     665 .. 0.73
   3 ?    8.0   0.0      0.01       2.2      20     124 ..    1052    1160 ..    1044    1173 .. 0.77
   4 !    8.6   0.0    0.0066       1.4      34      74 ..    1355    1397 ..    1331    1437 .. 0.77
   5 !   10.8   0.0    0.0013      0.29      29      86 ..    1734    1791 ..    1708    1839 .. 0.74
   6 ?    2.8   0.0       0.4        87      44      73 ..    2059    2092 ..    2029    2132 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 3.4
   IstB_IS21  48 enivllGpsGvGKshlaialgve 70 
                   i+l G +G GK+ l   +++e
  KHJ30857.1 291 SPILLHGLPGSGKTLLVNDFARE 313
                 568999********998877765 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.061
   IstB_IS21  46 kkenivllGpsGvGKs....hlaialgveav 72 
                  +e i+l+G +G+GK+     la +lg++ v
  KHJ30857.1 626 YSEPILLIGETGIGKTtvvqQLADSLGYKLV 656
                 56889**********9333336666666665 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.01
   IstB_IS21   20 edidfraarsldkrkvkeLatlsfiekkenivllGpsGvGKshlaialgveavraglsvlfvrvedLveelk..rarrdgkla..r..alkrllkvd 110 
                  ++ ++  ++s+d+++++ +++ s  +++  +++ Gp+  GK+ +   l++   ++ +++     +dL e l   +  +dg+l+  +   +++l + +
  KHJ30857.1 1052 QEQNYIRTPSVDRNILNLVRAIS--TRRYPVLIQGPTSSGKTSMIEYLARYSGNKCVRINNHEHTDLQEYLGsyVSTSDGNLTfqEglLIQALRRGH 1146
                  56677788888888888777766..788899***********999999999999999999999999988875223455665541133257999999* PP

   IstB_IS21  111 llilDdlgllpldq 124 
                   +ilD+l l p d 
  KHJ30857.1 1147 WIILDELNLAPTDV 1160
                  ********999885 PP

  == domain 4  score: 8.6 bits;  conditional E-value: 0.0066
   IstB_IS21   34 kvkeL..atlsfiekkenivllGpsGvGKshlaialgveavra 74  
                  ++++L     + i+++e ++l+G +G GK+ +   l+ + +++
  KHJ30857.1 1355 AIQRLyiLVSHAIQNNEPVLLVGETGCGKTTVCQMLAESFAKK 1397
                  55544324456699****************9877777665554 PP

  == domain 5  score: 10.8 bits;  conditional E-value: 0.0013
   IstB_IS21   29 sldkrkvkeLatlsfiekkenivllGpsGvGKshlaialgveavraglsvlfvrvedL 86  
                  ++  +k+++++    ++ ++ i+l G +GvGK+ l +al++   ++ +++     +dL
  KHJ30857.1 1734 EAPTTKLNSMRIVRALQVRKPILLEGNPGVGKTTLITALARVCNQSLTRINLSEHSDL 1791
                  455677778888888889999******************9876666666665555555 PP

  == domain 6  score: 2.8 bits;  conditional E-value: 0.4
   IstB_IS21   44 iekkenivllGpsGvGKs....hlaialgveavr 73  
                  i+++  ++l+G sG GK+    h+a+ +g++ v+
  KHJ30857.1 2059 IQQNIPCLLVGLSGSGKTallnHIAAIIGKKLVN 2092
                  56666789*********96666778888888776 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0       1.4   3.1e+02       4      25 ..     293     314 ..     290     324 .. 0.81
   2 !    8.7   0.0    0.0056       1.2       4      25 ..     630     651 ..     627     661 .. 0.86
   3 ?   -0.3   0.0       3.2   6.9e+02       4      27 ..    1080    1103 ..    1078    1108 .. 0.87
   4 !   10.9   0.0    0.0012      0.26       4      29 ..    1373    1398 ..    1370    1404 .. 0.88
   5 ?    7.6   0.0     0.012       2.6       4      29 ..    1755    1780 ..    1752    1788 .. 0.85
   6 !    8.7   0.0    0.0057       1.2       4      34 ..    2065    2095 ..    2062    2112 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 1.4
                 EEEEESTTSSHHHHHHHHHHHH CS
       SRP54   4 illvGlqGaGKTttlaKLaall 25 
                 ill Gl G+GKT  +   a+ l
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFAREL 314
                 89**********9999888766 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0056
                 EEEEESTTSSHHHHHHHHHHHH CS
       SRP54   4 illvGlqGaGKTttlaKLaall 25 
                 ill+G +G+GKTt + +La+ l
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSL 651
                 89*****************876 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 3.2
                  EEEEESTTSSHHHHHHHHHHHHHH CS
       SRP54    4 illvGlqGaGKTttlaKLaallkk 27  
                  +l+ G++ +GKT+ +  La++  +
  KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLARYSGN 1103
                  6889***************99765 PP

  == domain 4  score: 10.9 bits;  conditional E-value: 0.0012
                  EEEEESTTSSHHHHHHHHHHHHHHTT CS
       SRP54    4 illvGlqGaGKTttlaKLaallkkeg 29  
                  +llvG +G GKTt +  La+ + k+ 
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFAKKL 1398
                  79******************999875 PP

  == domain 5  score: 7.6 bits;  conditional E-value: 0.012
                  EEEEESTTSSHHHHHHHHHHHHHHTT CS
       SRP54    4 illvGlqGaGKTttlaKLaallkkeg 29  
                  ill G  G+GKTt ++ La++++++ 
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVCNQSL 1780
                  8999****************998875 PP

  == domain 6  score: 8.7 bits;  conditional E-value: 0.0057
                  EEEEESTTSSHHHHHHHHHHHHHHTTS-EEE CS
       SRP54    4 illvGlqGaGKTttlaKLaallkkegkkvll 34  
                  +llvGl G+GKT  l  +aa++ k+  ++ l
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHIAAIIGKKLVNLSL 2095
                  59******************99998666555 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0       2.8   6.1e+02      25      39 ..     293     307 ..     279     311 .. 0.81
   2 ?    5.0   0.0     0.093        20      25      39 ..     630     644 ..     622     650 .. 0.87
   3 ?    4.2   0.0      0.17        36      24      39 ..    1079    1094 ..    1069    1101 .. 0.83
   4 ?    5.7   0.0     0.055        12      19      38 ..    1367    1386 ..    1361    1391 .. 0.83
   5 !    9.3   0.0    0.0044      0.95      24      45 ..    1754    1775 ..    1745    1789 .. 0.81
   6 !    9.0   0.1    0.0054       1.2      24      45 ..    2064    2085 ..    2052    2097 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 2.8
      AAA_29  25 tlltGpsGsGKSTll 39 
                 +ll G  GsGK+ l+
  KHJ30857.1 293 ILLHGLPGSGKTLLV 307
                 79*********9776 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.093
      AAA_29  25 tlltGpsGsGKSTll 39 
                 +ll+G++G GK+T++
  KHJ30857.1 630 ILLIGETGIGKTTVV 644
                 79***********97 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.17
      AAA_29   24 atlltGpsGsGKSTll 39  
                   +l+ Gp+ sGK++++
  KHJ30857.1 1079 PVLIQGPTSSGKTSMI 1094
                  589**********998 PP

  == domain 4  score: 5.7 bits;  conditional E-value: 0.055
      AAA_29   19 idlkgatlltGpsGsGKSTl 38  
                  i+ ++ +ll+G++G GK+T+
  KHJ30857.1 1367 IQNNEPVLLVGETGCGKTTV 1386
                  5555679************7 PP

  == domain 5  score: 9.3 bits;  conditional E-value: 0.0044
      AAA_29   24 atlltGpsGsGKSTllDAiqal 45  
                   +ll G+ G+GK+Tl+ A++ +
  KHJ30857.1 1754 PILLEGNPGVGKTTLITALARV 1775
                  589*************999877 PP

  == domain 6  score: 9.0 bits;  conditional E-value: 0.0054
      AAA_29   24 atlltGpsGsGKSTllDAiqal 45  
                   +ll+G sGsGK++ll  i+a+
  KHJ30857.1 2064 PCLLVGLSGSGKTALLNHIAAI 2085
                  689*************766665 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1      0.47     1e+02      86     130 ..     276     321 ..     265     330 .. 0.75
   2 !   10.2   0.0    0.0024      0.51      99     136 ..     627     666 ..     590     668 .. 0.75
   3 ?   -0.9   0.0       6.3   1.4e+03     102     126 ..    1080    1104 ..    1055    1115 .. 0.70
   4 !    8.2   0.1    0.0096       2.1      94     132 ..    1364    1403 ..    1310    1411 .. 0.67
   5 !   10.6   0.0    0.0019       0.4      85     130 ..    1737    1783 ..    1697    1790 .. 0.74
   6 ?    7.8   0.1     0.013       2.8     102     121 ..    2065    2084 ..    2042    2099 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.47
                  THTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S-- CS
  RsgA_GTPase  86 tkegleelkellkd.ktsvlvGqSGvGKStLinallpelelktgev 130
                  ++ ++e+ +e+l + + ++l G  G GK+ L+n ++ el l+   v
   KHJ30857.1 276 SNMNMENFAEALLSsSPILLHGLPGSGKTLLVNDFARELGLASTMV 321
                  356677777766554889999*************999877665555 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0024
                  TSEEEEECSTTSSHHHHHHHHCTT-..----S-------- CS
  RsgA_GTPase  99 dktsvlvGqSGvGKStLinallpel..elktgevseklgr 136
                  ++ ++l+G++G+GK+t++ +l+ +l  +l + ++s++++ 
   KHJ30857.1 627 SEPILLIGETGIGKTTVVQQLADSLgyKLVVVNLSQQSEV 666
                  46789****************9976336666677776665 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 6.3
                   EEEECSTTSSHHHHHHHHCTT---- CS
  RsgA_GTPase  102 svlvGqSGvGKStLinallpelelk 126 
                   +++ G++  GK+++i+ l+     k
   KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLARYSGNK 1104
                   4567************998765555 PP

  == domain 4  score: 8.2 bits;  conditional E-value: 0.0096
                   HHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S---- CS
  RsgA_GTPase   94 kellkd.ktsvlvGqSGvGKStLinallpelelktgevse 132 
                   ++++++ + ++lvG++G GK+t+  +l+++   k   v +
   KHJ30857.1 1364 SHAIQNnEPVLLVGETGCGKTTVCQMLAESFAKKLFTVNA 1403
                   44555558899****************9986665555544 PP

  == domain 5  score: 10.6 bits;  conditional E-value: 0.0019
                   TTHTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S-- CS
  RsgA_GTPase   85 ktkegleelkellkd.ktsvlvGqSGvGKStLinallpelelktgev 130 
                   +tk +  ++ ++l+  k ++l G+ GvGK+tLi al+   +++   +
   KHJ30857.1 1737 TTKLNSMRIVRALQVrKPILLEGNPGVGKTTLITALARVCNQSLTRI 1783
                   4445555666667765889999**************98666655554 PP

  == domain 6  score: 7.8 bits;  conditional E-value: 0.013
                   EEEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase  102 svlvGqSGvGKStLinallp 121 
                   ++lvG SG GK++L+n+++ 
   KHJ30857.1 2065 CLLVGLSGSGKTALLNHIAA 2084
                   5799*************986 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.95   2.1e+02       2      22 ..     293     313 ..     292     324 .. 0.84
   2 ?    8.4   0.1     0.011       2.4       2      27 ..     630     656 ..     629     661 .. 0.88
   3 ?    8.1   0.0     0.013       2.9       2      27 ..    1080    1106 ..    1079    1143 .. 0.83
   4 ?    6.1   0.0     0.057        12       2      22 ..    1373    1393 ..    1372    1438 .. 0.80
   5 !    8.9   0.0    0.0077       1.7       2      22 ..    1755    1775 ..    1754    1834 .. 0.81
   6 ?    1.7   0.1       1.2   2.6e+02       4      22 ..    2067    2085 ..    2065    2093 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.95
      AAA_28   2 ivitGgestGKTtlleaLaar 22 
                 i + G +++GKT l++ +a++
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARE 313
                 778999***********9976 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.011
      AAA_28   2 ivitGgestGKTtlleaLaar.gypvv 27 
                 i ++G  + GKTt++++La+  gy+ v
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSlGYKLV 656
                 789****************87799865 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.013
      AAA_28    2 ivitGgestGKTtlleaLaar.gypvv 27  
                  + i G+ s+GKT+++e La+  g ++v
  KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLARYsGNKCV 1106
                  6799***************87776666 PP

  == domain 4  score: 6.1 bits;  conditional E-value: 0.057
      AAA_28    2 ivitGgestGKTtlleaLaar 22  
                  + ++G  ++GKTt+++ La+ 
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAES 1393
                  6789999************75 PP

  == domain 5  score: 8.9 bits;  conditional E-value: 0.0077
      AAA_28    2 ivitGgestGKTtlleaLaar 22  
                  i + G ++ GKTtl+ aLa+ 
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARV 1775
                  7789**************975 PP

  == domain 6  score: 1.7 bits;  conditional E-value: 1.2
      AAA_28    4 itGgestGKTtlleaLaar 22  
                  ++G +++GKT ll+++aa 
  KHJ30857.1 2067 LVGLSGSGKTALLNHIAAI 2085
                  78999**********9985 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0    0.0047         1       1      28 [.     293     321 ..     293     344 .. 0.76
   2 ?    0.2   0.0       2.3   5.1e+02       7      23 ..     636     653 ..     630     670 .. 0.76
   3 ?    2.5   0.0      0.47     1e+02       9      81 ..    1088    1163 ..    1080    1171 .. 0.70
   4 ?    5.0   0.0     0.082        18       5      23 ..    1377    1397 ..    1373    1433 .. 0.77
   5 !   12.1   0.0   0.00054      0.12       2      79 ..    1756    1839 ..    1755    1853 .. 0.70
   6 ?   -1.1   0.0         6   1.3e+03       5      20 ..    2069    2084 ..    2065    2113 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0047
  Viral_helicase1   1 ivvhGvpGcGKStlirkllrts.liltvn 28 
                      i+ hG pG+GK+ l+ +++r+  l  t++
       KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELgLASTMV 321
                      678*****************955444444 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 2.3
  Viral_helicase1   7 pGcGKStlirkllrts.l 23 
                       G GK+t++++l+++  +
       KHJ30857.1 636 TGIGKTTVVQQLADSLgY 653
                      688**********98663 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.47
  Viral_helicase1    9 cGKStlirkllrts..liltvnrptaelltegk.pklpnlsvr.tvdsflmalvks.tkgkililDEylllhaGyill 81  
                       +GK+++i  l+r s    +++n+    +l e + +++ +++++ t+++ l   ++   +g+ +ilDE  l+++ ++++
       KHJ30857.1 1088 SGKTSMIEYLARYSgnKCVRINNHEHTDLQEYLgSYVSTSDGNlTFQEGLL--IQAlRRGHWIILDELNLAPTDVLEA 1163
                       9************99866666666688888888866666655514443333..333568********99999655544 PP

  == domain 4  score: 5.0 bits;  conditional E-value: 0.082
  Viral_helicase1    5 GvpGcGKStlirkllrts..l 23  
                       G  GcGK+t+++ l+++    
       KHJ30857.1 1377 GETGCGKTTVCQMLAESFakK 1397
                       567*********999874443 PP

  == domain 5  score: 12.1 bits;  conditional E-value: 0.00054
  Viral_helicase1    2 vvhGvpGcGKStlirkllrts..liltvnrptaelltegk.pklpnlsvrtvdsflmalvks....tkgkililDEylllhaGyi 79  
                       +  G pG GK+tli  l+r +     ++n +   +lt+ + +++p  + + +++f+  + +     +kg+ ++lDE  l+++ ++
       KHJ30857.1 1756 LLEGNPGVGKTTLITALARVCnqSLTRINLSEHSDLTDLFgSDVPVANAE-ICQFEWRDAPFlqamQKGEWVLLDEMNLAPQSVL 1839
                       67899***************998666667777888888888444444443.2223322222222356799******999987655 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 6
  Viral_helicase1    5 GvpGcGKStlirkllr 20  
                       G  G+GK+ l+ +++ 
       KHJ30857.1 2069 GLSGSGKTALLNHIAA 2084
                       888*******999875 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.37        79      20      45 ..     290     315 ..     280     332 .. 0.84
   2 ?    2.1   0.0      0.73   1.6e+02      21      44 ..     628     651 ..     619     668 .. 0.84
   3 ?    6.1   0.0     0.044       9.4      18      44 ..    1075    1101 ..    1063    1176 .. 0.79
   4 ?    6.5   0.0     0.033       7.1      18      51 ..    1368    1401 ..    1355    1485 .. 0.75
   5 ?    0.9   0.0       1.7   3.6e+02      17      42 ..    1749    1774 ..    1738    1783 .. 0.78
   6 ?    7.7   0.0     0.014       3.1      11      43 ..    2055    2085 ..    2046    2173 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.37
    ATPase_2  20 neiyfiYGpegsGKtaLlkeiienle 45 
                 ++++++ G  gsGKt L++ ++ +l 
  KHJ30857.1 290 SSPILLHGLPGSGKTLLVNDFARELG 315
                 57899***************999885 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.73
    ATPase_2  21 eiyfiYGpegsGKtaLlkeiienl 44 
                 e++++ G  g+GKt+++++++  l
  KHJ30857.1 628 EPILLIGETGIGKTTVVQQLADSL 651
                 688999*************98876 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.044
    ATPase_2   18 epneiyfiYGpegsGKtaLlkeiienl 44  
                  +++ +++i Gp +sGKt+++  ++  +
  KHJ30857.1 1075 TRRYPVLIQGPTSSGKTSMIEYLARYS 1101
                  468899**************9887665 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.033
    ATPase_2   18 epneiyfiYGpegsGKtaLlkeiienledkdkyv 51  
                  ++ne++++ G  g+GKt++ + ++e   +k + v
  KHJ30857.1 1368 QNNEPVLLVGETGCGKTTVCQMLAESFAKKLFTV 1401
                  67999**************999999886654444 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 1.7
    ATPase_2   17 repneiyfiYGpegsGKtaLlkeiie 42  
                   + ++++++ G  g+GKt+L+  ++ 
  KHJ30857.1 1749 LQVRKPILLEGNPGVGKTTLITALAR 1774
                  5668899999***********87765 PP

  == domain 6  score: 7.7 bits;  conditional E-value: 0.014
    ATPase_2   11 leeilerepneiyfiYGpegsGKtaLlkeiien 43  
                  +   +++  n + ++ G  gsGKtaLl++i+  
  KHJ30857.1 2055 VMICIQQ--NIPCLLVGLSGSGKTALLNHIAAI 2085
                  4444444..8889999*************9865 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0    0.0018      0.38       4      25 ..     630     650 ..     627     665 .. 0.85
   2 ?   -1.0   0.0       6.3   1.4e+03       4      21 ..    1080    1097 ..    1078    1104 .. 0.86
   3 !   14.3   0.0   0.00012     0.025       4      23 ..    1373    1392 ..    1370    1411 .. 0.85
   4 ?    2.8   0.0      0.41        89       2      22 ..    1753    1773 ..    1752    1782 .. 0.88
   5 ?    2.3   0.0      0.61   1.3e+02       5      22 ..    2066    2083 ..    2063    2113 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.0018
   PduV-EutP   4 illiGkvgsGKttLtqalkgee 25 
                 illiG++g GKtt+ q+l + +
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLAD-S 650
                 9*****************86.3 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 6.3
   PduV-EutP    4 illiGkvgsGKttLtqal 21  
                  +l+ G++ sGKt++ + l
  KHJ30857.1 1080 VLIQGPTSSGKTSMIEYL 1097
                  7888*********98876 PP

  == domain 3  score: 14.3 bits;  conditional E-value: 0.00012
   PduV-EutP    4 illiGkvgsGKttLtqalkg 23  
                  +ll+G++g+GKtt++q l +
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAE 1392
                  89***************986 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.41
   PduV-EutP    2 kkilliGkvgsGKttLtqalk 22  
                  k ill G+ g+GKttL  al 
  KHJ30857.1 1753 KPILLEGNPGVGKTTLITALA 1773
                  679999**********99986 PP

  == domain 5  score: 2.3 bits;  conditional E-value: 0.61
   PduV-EutP    5 lliGkvgsGKttLtqalk 22  
                  ll+G +gsGKt+L +++ 
  KHJ30857.1 2066 LLVGLSGSGKTALLNHIA 2083
                  89***********98875 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       8.5   1.8e+03      48      71 ..     293     316 ..     274     328 .. 0.85
   2 !   10.3   0.1    0.0023       0.5      48      74 ..     630     656 ..     614     741 .. 0.81
   3 ?    3.4   0.0       0.3        65      48      78 ..    1080    1110 ..    1065    1127 .. 0.83
   4 !   11.1   0.0    0.0013      0.28      47      73 ..    1372    1398 ..    1354    1426 .. 0.83
   5 ?    4.4   0.0      0.14        30      45      73 ..    1752    1780 ..    1737    1799 .. 0.81
   6 ?    0.7   0.0         2   4.3e+02      48      76 ..    2065    2093 ..    2052    2162 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 8.5
       Rad17  48 LLisGPsGCgkstvvkvLskelgi 71 
                 +L+ G +G gk+  v+  ++elg 
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELGL 316
                 6889*****************996 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0023
       Rad17  48 LLisGPsGCgkstvvkvLskelgiklr 74 
                 +L+ G +G gk+tvv+ L+  lg+kl 
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLGYKLV 656
                 46679*******************985 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.3
       Rad17   48 LLisGPsGCgkstvvkvLskelgiklrewln 78  
                  +Li GP+  gk+ +++ L++  g k     n
  KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLARYSGNKCVRINN 1110
                  79******************99998776555 PP

  == domain 4  score: 11.1 bits;  conditional E-value: 0.0013
       Rad17   47 iLLisGPsGCgkstvvkvLskelgikl 73  
                   +L+ G +GCgk+tv ++L+  ++ kl
  KHJ30857.1 1372 PVLLVGETGCGKTTVCQMLAESFAKKL 1398
                  46889***************9888776 PP

  == domain 5  score: 4.4 bits;  conditional E-value: 0.14
       Rad17   45 kriLLisGPsGCgkstvvkvLskelgikl 73  
                  ++ +L+ G +G gk+t +  L++    +l
  KHJ30857.1 1752 RKPILLEGNPGVGKTTLITALARVCNQSL 1780
                  3457899***************9877665 PP

  == domain 6  score: 0.7 bits;  conditional E-value: 2
       Rad17   48 LLisGPsGCgkstvvkvLskelgiklrew 76  
                   L+ G sG gk+  ++ ++ + g kl + 
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHIAAIIGKKLVNL 2093
                  5899***************9999998654 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.95   2.1e+02       5      22 ..     293     310 ..     289     329 .. 0.86
   2 !   11.0   0.0    0.0012      0.25       5      31 ..     630     660 ..     627     747 .. 0.75
   3 ?   -0.1   0.0         3   6.4e+02       3      22 ..    1078    1097 ..    1076    1110 .. 0.82
   4 ?    5.2   0.0     0.071        15       5      23 ..    1373    1391 ..    1369    1426 .. 0.82
   5 ?    4.8   0.0     0.093        20       5      22 ..    1755    1772 ..    1752    1784 .. 0.86
   6 ?    3.5   0.0      0.24        52       4      32 ..    2064    2096 ..    2061    2154 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.95
      AAA_24   5 iliyGpsgiGKTtlakel 22 
                 il+ G +g+GKT l++ +
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDF 310
                 899***********9988 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.0012
      AAA_24   5 iliyGpsgiGKTtlakel....gpkplfidt 31 
                 il++G+ giGKTt++ +l    g+k +++++
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLadslGYKLVVVNL 660
                 89****************9998888888854 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 3
      AAA_24    3 lkiliyGpsgiGKTtlakel 22  
                  + +li Gp  +GKT+++  l
  KHJ30857.1 1078 YPVLIQGPTSSGKTSMIEYL 1097
                  56899**********99877 PP

  == domain 4  score: 5.2 bits;  conditional E-value: 0.071
      AAA_24    5 iliyGpsgiGKTtlakelg 23  
                  +l++G+ g GKTt++ +l 
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLA 1391
                  799************9983 PP

  == domain 5  score: 4.8 bits;  conditional E-value: 0.093
      AAA_24    5 iliyGpsgiGKTtlakel 22  
                  il+ G +g+GKTtl++ l
  KHJ30857.1 1755 ILLEGNPGVGKTTLITAL 1772
                  7899**********9987 PP

  == domain 6  score: 3.5 bits;  conditional E-value: 0.24
      AAA_24    4 kiliyGpsgiGKTtlakel....gpkplfidte 32  
                   +l++G sg+GKT l++++    g+k + + ++
  KHJ30857.1 2064 PCLLVGLSGSGKTALLNHIaaiiGKKLVNLSLN 2096
                  5899*************9977766666655444 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.44        94      38      58 ..     293     313 ..     274     334 .. 0.90
   2 ?    5.2   0.0     0.059        13      38      57 ..     630     649 ..     617     654 .. 0.90
   3 ?    4.2   0.0      0.11        24      21      58 ..    1064    1100 ..    1051    1115 .. 0.73
   4 !   11.5   0.0   0.00069      0.15      17      81 ..    1353    1421 ..    1348    1459 .. 0.68
   5 ?   -0.5   0.0       3.1   6.7e+02      36      57 ..    1753    1774 ..    1736    1784 .. 0.80
   6 ?    1.0   0.0       1.1   2.4e+02      36      56 ..    2064    2083 ..    2044    2151 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.44
        TniB  38 lllvGdsnnGKtmivekFarl 58 
                 +ll+G +  GKt +v+ Far+
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARE 313
                 799***************986 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.059
        TniB  38 lllvGdsnnGKtmivekFar 57 
                 +ll+G++ +GKt++v++ a+
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLAD 649
                 79*************99765 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.11
        TniB   21 erLeeLleypkrkrmpnlllvGdsnnGKtmivekFarl 58  
                  +++ +L+++ +  r   +l+ G++  GKt+++e  ar 
  KHJ30857.1 1064 RNILNLVRAISTRR-YPVLIQGPTSSGKTSMIEYLARY 1100
                  55556666666666.5689*************987765 PP

  == domain 4  score: 11.5 bits;  conditional E-value: 0.00069
        TniB   17 keilerLeeLleypkrkrmpnlllvGdsnnGKtmiv....ekFarlh.ppekdedaekvpvlvvqappkp 81  
                  +++++rL  L++++ ++  + +llvG++ +GKt+++    e+Fa++  + + ++++e+ +++ +q p + 
  KHJ30857.1 1353 TQAIQRLYILVSHAIQNN-EPVLLVGETGCGKTTVCqmlaESFAKKLfTVNAHQNTETGDLIGAQRPVRN 1421
                  578999999999998888.77999*********8872222566655523344566666788887766554 PP

  == domain 5  score: -0.5 bits;  conditional E-value: 3.1
        TniB   36 pnlllvGdsnnGKtmivekFar 57  
                  + +ll G++ +GKt+++   ar
  KHJ30857.1 1753 KPILLEGNPGVGKTTLITALAR 1774
                  458999**********987766 PP

  == domain 6  score: 1.0 bits;  conditional E-value: 1.1
        TniB   36 pnlllvGdsnnGKtmivekFa 56  
                  p +llvG s  GKt+++++ a
  KHJ30857.1 2064 P-CLLVGLSGSGKTALLNHIA 2083
                  3.6889**********99866 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0       3.4   7.3e+02      99     126 ..     211     238 ..     207     250 .. 0.90
   2 ?    2.5   0.0      0.64   1.4e+02       6     109 ..     293     390 ..     289     411 .. 0.74
   3 ?    5.1   0.0       0.1        22       6      43 ..     630     663 ..     627     672 .. 0.83
   4 ?    6.1   0.0     0.051        11       6     105 ..    1080    1170 ..    1076    1180 .. 0.73
   5 ?    5.3   0.0      0.09        20       6      45 ..    1373    1408 ..    1369    1430 .. 0.85
   6 ?    3.6   0.0       0.3        65       6      44 ..    1755    1789 ..    1752    1837 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 3.4
                 HHHHHH--EE-------EE-TT-EEEEE CS
       AAA_2  99 LLqileggtltdkqgrkvdtknilfImt 126
                 +L +le+g+l+++ +++ d +n +f m+
  KHJ30857.1 211 FLSLLEEGRLRQATQKMKDLNNSIFRMS 238
                 899************999****999775 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.64
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHH.HHHHHTTT-HHHHTTS.........EEEEETGGG-------------HH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvs.rligappgyvgaeegG.........ivllDEidKihpkessgadvSreg 94 
                 ill g  g+Gkt+l +  a+ l +   ++++++  +e +    ++ l+    +g++pg  + + g           +++++id++ +           +
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELGL--ASTMVTLHLNEQTD---AKVLIGvYATGSNPGSFEWKPGVlttavkegrWIFIEDIDRAPN-----------D 375
                 677788888888888888888876..66777766666665...5555532456777777666666577777777899********99...........9 PP

                 HHHHHHHHHH--EE- CS
       AAA_2  95 VqrdLLqileggtlt 109
                 V  ++L ++e  +l 
  KHJ30857.1 376 VISLILSLVERRELH 390
                 ******999987765 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.1
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG- CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradasel 43 
                 ill+g+tg+Gkt + ++la+ l      kl++++ s+ 
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLGY----KLVVVNLSQQ 663
                 899*****************9986....7777666665 PP

  == domain 4  score: 6.1 bits;  conditional E-value: 0.051
                  EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS.........EEEEETGGG-------------H CS
       AAA_2    6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG.........ivllDEidKihpkessgadvSre 93  
                  +l+ gpt +Gkt + + la++      +k +r++  e +    +++++ + + +++g+  ++eg           + lDE+  +             
  KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLARYSG----NKCVRINNHEHTD---LQEYLGSYVSTSDGNLTFQEGLliqalrrghWIILDELNLAPT----------- 1158
                  6899******************9....5777777777776...4445555555555555544444555566668777899888877........... PP

                  HHHHHHHHHHH- CS
       AAA_2   94 gVqrdLLqileg 105 
                  +V+++L ++l++
  KHJ30857.1 1159 DVLEALNRLLDD 1170
                  888888888887 PP

  == domain 5  score: 5.3 bits;  conditional E-value: 0.09
                  EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG--- CS
       AAA_2    6 illlgptgvGktelakalaellfvkkekkliradaselle 45  
                  +ll+g+tg+Gkt + ++lae       kkl +++a + +e
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFA----KKLFTVNAHQNTE 1408
                  6899***************9987....5777777777766 PP

  == domain 6  score: 3.6 bits;  conditional E-value: 0.3
                  EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-- CS
       AAA_2    6 illlgptgvGktelakalaellfvkkekkliradasell 44  
                  ill g+ gvGkt l  ala++ +    ++l+r++ se  
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVCN----QSLTRINLSEHS 1789
                  7899******************9....466666666544 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       8.3   1.8e+03      25      48 ..     291     314 ..     277     321 .. 0.77
   2 ?    4.6   0.0      0.14        30      24      48 ..     627     651 ..     601     666 .. 0.83
   3 ?    1.9   0.0      0.88   1.9e+02      12      41 ..    1066    1094 ..    1059    1106 .. 0.81
   4 !   13.1   0.1   0.00033     0.071      11      64 ..    1310    1406 ..    1303    1508 .. 0.64
   5 ?    4.2   0.0      0.17        38       6      51 ..    1727    1779 ..    1722    1785 .. 0.81
   6 ?   -0.5   0.0       4.9   1.1e+03      22      47 ..    2060    2085 ..    2034    2092 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 8.3
                 SEEEEEESTTSTHHHHHHHHHHHH CS
      ResIII  25 krglikmaTGtGKTlvaaklierl 48 
                   +l++   G+GKTl+   ++++l
  KHJ30857.1 291 SPILLHGLPGSGKTLLVNDFAREL 314
                 567888889******987777665 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.14
                 TSEEEEEESTTSTHHHHHHHHHHHH CS
      ResIII  24 dkrglikmaTGtGKTlvaaklierl 48 
                  + +l+  +TG GKT v  +l+++l
  KHJ30857.1 627 SEPILLIGETGIGKTTVVQQLADSL 651
                 5688999**********99998876 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.88
                  HHHHT......TTSEEEEEESTTSTHHHHH CS
      ResIII   12 ienlleklkskrdkrglikmaTGtGKTlva 41  
                  i nl+ +++ +r+  +li+ +T +GKT ++
  KHJ30857.1 1066 ILNLVRAIS-TRRYPVLIQGPTSSGKTSMI 1094
                  667777887.9999*************986 PP

  == domain 4  score: 13.1 bits;  conditional E-value: 0.00033
                  HHHHHT.....................................................TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEE CS
      ResIII   11 aienlleklks...............................................krdkrglikmaTGtGKTlvaaklierllkkgkeekflfl 60  
                  a++n++ek+ +                                               ++++ +l++ +TG+GKT v+  l+e+++kk     f + 
  KHJ30857.1 1310 AVQNIIEKVMKvkidtlgqlynaavsseiksynltqnsqeivwtqaiqrlyilvshaiQNNEPVLLVGETGCGKTTVCQMLAESFAKK----LFTVN 1402
                  555555555555555555555555555555666666666666666666677788888899*******************999999998....34444 PP

                  ESSH CS
      ResIII   61 vprk 64  
                  ++++
  KHJ30857.1 1403 AHQN 1406
                  4444 PP

  == domain 5  score: 4.2 bits;  conditional E-value: 0.17
                  HHHHHHHHHHT.............TTSEEEEEESTTSTHHHHHHHHHHHH-S. CS
      ResIII    6 eyQeeaienlleklks.......krdkrglikmaTGtGKTlvaaklierllkk 51  
                    Q  a e+   kl+s       + +k +l++   G+GKT ++++l++ + ++
  KHJ30857.1 1727 TNQNYAFEAPTTKLNSmrivralQVRKPILLEGNPGVGKTTLITALARVCNQS 1779
                  567777777777777777788888999****************9999888776 PP

  == domain 6  score: -0.5 bits;  conditional E-value: 4.9
                  .TTSEEEEEESTTSTHHHHHHHHHHH CS
      ResIII   22 krdkrglikmaTGtGKTlvaaklier 47  
                  +++   l++   G+GKT ++ ++++ 
  KHJ30857.1 2060 QQNIPCLLVGLSGSGKTALLNHIAAI 2085
                  566677889999******99887765 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0      0.13        28       2      21 ..     297     316 ..     296     321 .. 0.92
   2 ?    6.1   0.1     0.063        14       2      24 ..     634     656 ..     633     672 .. 0.88
   3 !    9.8   0.0    0.0046      0.99       2      33 ..    1377    1416 ..    1376    1484 .. 0.68
   4 ?    3.0   0.0      0.61   1.3e+02       2      17 ..    1759    1774 ..    1759    1787 .. 0.85
   5 ?    3.8   0.1      0.34        74       1      25 [.    2068    2092 ..    2068    2095 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.13
                 E-TTSSHHHHHHHHHHHHTE CS
      AAA_17   2 GgPGsGKgtqceklvekygf 21 
                 G+PGsGK+ +++  ++++g+
  KHJ30857.1 297 GLPGSGKTLLVNDFARELGL 316
                 9***************9997 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.063
                 E-TTSSHHHHHHHHHHHHTEEEE CS
      AAA_17   2 GgPGsGKgtqceklvekygfthl 24 
                 G  G GK+t++++l++ +g++ +
  KHJ30857.1 634 GETGIGKTTVVQQLADSLGYKLV 656
                 6679**************99976 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.0046
                  E-TTSSHHHHHHHHHHHH........TEEEEEHHHHHHHH CS
      AAA_17    2 GgPGsGKgtqceklveky........gfthlsaGdllree 33  
                  G  G+GK+t+c+ l+e +          +  ++Gdl+ + 
  KHJ30857.1 1377 GETGCGKTTVCQMLAESFakklftvnAHQNTETGDLIGAQ 1416
                  778************9885554555445556777777654 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.61
                  E-TTSSHHHHHHHHHH CS
      AAA_17    2 GgPGsGKgtqceklve 17  
                  G PG+GK+t++  l++
  KHJ30857.1 1759 GNPGVGKTTLITALAR 1774
                  78********999986 PP

  == domain 5  score: 3.8 bits;  conditional E-value: 0.34
                  EE-TTSSHHHHHHHHHHHHTEEEEE CS
      AAA_17    1 lGgPGsGKgtqceklvekygfthls 25  
                  +G+ GsGK+ ++++++  +g + ++
  KHJ30857.1 2068 VGLSGSGKTALLNHIAAIIGKKLVN 2092
                  79*************9988877766 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0       2.2   4.8e+02       2      23 ..     293     314 ..     292     334 .. 0.80
   2 ?    3.4   0.0      0.37        80       2      22 ..     630     650 ..     629     696 .. 0.79
   3 ?    3.1   0.0      0.44        94       2      31 ..    1080    1113 ..    1079    1132 .. 0.75
   4 ?    4.6   0.0      0.16        34       2      23 ..    1373    1397 ..    1372    1421 .. 0.77
   5 ?    7.9   0.0     0.014       3.1       3      21 ..    1756    1774 ..    1754    1793 .. 0.80
   6 ?    4.4   0.1      0.17        37       3      20 ..    2066    2083 ..    2064    2105 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 2.2
                 EEEEESTTSSHHHHHHHHHTST CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgek 23 
                 +++ G p +GK+ L+n   +e 
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFAREL 314
                 6789************998874 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.37
                 EEEEESTTSSHHHHHHHHHTS CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge 22 
                 ++++G +  GK+t++++l ++
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADS 650
                 789**************9974 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.44
                  EEEEESTTSSHHHHHHHHHT...S.TEEESSSTT CS
    MMR_HSR1    2 vaivGrpNvGKStLinaltg...e.kaivsdkpg 31  
                  v+i G + +GK+++i  l +   +  ++++++  
  KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLARysgNkCVRINNHEH 1113
                  7899**************8633221346655555 PP

  == domain 4  score: 4.6 bits;  conditional E-value: 0.16
                  EEEEESTTSSHHHHHHHHHTS...T CS
    MMR_HSR1    2 vaivGrpNvGKStLinaltge...k 23  
                  v++vG +  GK+t+ + l ++   k
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESfakK 1397
                  789***************9873322 PP

  == domain 5  score: 7.9 bits;  conditional E-value: 0.014
                  EEEESTTSSHHHHHHHHHT CS
    MMR_HSR1    3 aivGrpNvGKStLinaltg 21  
                  ++ G+p vGK+tLi al +
  KHJ30857.1 1756 LLEGNPGVGKTTLITALAR 1774
                  677**************86 PP

  == domain 6  score: 4.4 bits;  conditional E-value: 0.17
                  EEEESTTSSHHHHHHHHH CS
    MMR_HSR1    3 aivGrpNvGKStLinalt 20  
                  ++vG + +GK+ L+n + 
  KHJ30857.1 2066 LLVGLSGSGKTALLNHIA 2083
                  79*************986 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0    0.0053       1.1      16      42 ..     287     313 ..     276     345 .. 0.81
   2 ?    3.5   0.0      0.18        39      17      39 ..     625     647 ..     615     676 .. 0.80
   3 ?    7.6   0.0      0.01       2.2      12      37 ..    1363    1388 ..    1353    1399 .. 0.81
   4 ?    2.2   0.0      0.45        97      17      35 ..    1750    1768 ..    1740    1773 .. 0.86
   5 ?   -1.3   0.0         5   1.1e+03      21      38 ..    2064    2081 ..    2056    2179 .. 0.64

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0053
      ATPase  16 ipegrvvlitGepGtGKtifalqFlik 42 
                 + + + +l+ G pG+GKt+++  F+ +
  KHJ30857.1 287 LLSSSPILLHGLPGSGKTLLVNDFARE 313
                 677889******************754 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.18
      ATPase  17 pegrvvlitGepGtGKtifalqF 39 
                    + +l+ Ge+G GKt++++q 
  KHJ30857.1 625 IYSEPILLIGETGIGKTTVVQQL 647
                 556789*************9995 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.01
      ATPase   12 lkgGipegrvvlitGepGtGKtifal 37  
                  ++  i +++ vl++Ge+G+GKt++++
  KHJ30857.1 1363 VSHAIQNNEPVLLVGETGCGKTTVCQ 1388
                  566788999*************9987 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.45
      ATPase   17 pegrvvlitGepGtGKtif 35  
                    ++ +l+ G+pG GKt++
  KHJ30857.1 1750 QVRKPILLEGNPGVGKTTL 1768
                  668899***********97 PP

  == domain 5  score: -1.3 bits;  conditional E-value: 5
      ATPase   21 vvlitGepGtGKtifalq 38  
                    l++G +G+GKt +  +
  KHJ30857.1 2064 PCLLVGLSGSGKTALLNH 2081
                  578999999999987554 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0       3.8   8.3e+02       2      22 ..     293     313 ..     293     332 .. 0.83
   2 ?    7.4   0.1     0.022       4.8       2      21 ..     630     649 ..     629     654 .. 0.91
   3 ?    0.7   0.0       2.7   5.8e+02       3      20 ..    1081    1098 ..    1080    1111 .. 0.82
   4 ?    6.2   0.0     0.053        11       2      24 ..    1373    1394 ..    1372    1425 .. 0.78
   5 ?    5.1   0.0      0.12        25       2      20 ..    1755    1773 ..    1754    1788 .. 0.84
   6 ?    3.1   0.1      0.48     1e+02       3      19 ..    2066    2082 ..    2065    2101 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 3.8
                 EEEESSTTSSHHHHHHCHCT- CS
         Roc   2 vvlvGdsgvGKtsllkrfved 22 
                 ++l G  g+GKt l++ f ++
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARE 313
                 5778999*********99875 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.022
                 EEEESSTTSSHHHHHHCHCT CS
         Roc   2 vvlvGdsgvGKtsllkrfve 21 
                 ++l+G++g+GKt+ ++++ +
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLAD 649
                 79**************9976 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 2.7
                  EEESSTTSSHHHHHHCHC CS
         Roc    3 vlvGdsgvGKtsllkrfv 20  
                  ++ G +++GKts+++ + 
  KHJ30857.1 1081 LIQGPTSSGKTSMIEYLA 1098
                  6779*********98765 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.053
                  EEEESSTTSSHHHHHHCHCT-CC CS
         Roc    2 vvlvGdsgvGKtsllkrfvedkf 24  
                  v+lvG++g GKt+ ++ + e+ f
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAES-F 1394
                  79***********99887743.3 PP

  == domain 5  score: 5.1 bits;  conditional E-value: 0.12
                  EEEESSTTSSHHHHHHCHC CS
         Roc    2 vvlvGdsgvGKtsllkrfv 20  
                  ++l G+ gvGKt+l++ + 
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALA 1773
                  5777**********99875 PP

  == domain 6  score: 3.1 bits;  conditional E-value: 0.48
                  EEESSTTSSHHHHHHCH CS
         Roc    3 vlvGdsgvGKtsllkrf 19  
                  +lvG sg+GKt ll+++
  KHJ30857.1 2066 LLVGLSGSGKTALLNHI 2082
                  69************986 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0      0.19        40       5      26 ..     292     313 ..     289     333 .. 0.77
   2 ?    2.2   0.0       0.5   1.1e+02       5      26 ..     629     650 ..     626     674 .. 0.75
   3 ?    4.6   0.0     0.088        19       5      28 ..    1079    1102 ..    1075    1118 .. 0.81
   4 ?    5.1   0.0     0.061        13       3      31 ..    1370    1398 ..    1368    1416 .. 0.76
   5 ?    0.9   0.0       1.3   2.7e+02       3      26 ..    1752    1775 ..    1750    1798 .. 0.77
   6 ?    5.9   0.0     0.036       7.7       6      24 ..    2065    2083 ..    2060    2101 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.19
                 EEEEE-STTSSHHHHHHHHHHS CS
       SRPRB   5 avllvGlsdsGKTslftrLttd 26 
                  +ll Gl  sGKT+l +    +
  KHJ30857.1 292 PILLHGLPGSGKTLLVNDFARE 313
                 589************9988776 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.5
                 EEEEE-STTSSHHHHHHHHHHS CS
       SRPRB   5 avllvGlsdsGKTslftrLttd 26 
                  +ll+G +  GKT++ ++L   
  KHJ30857.1 629 PILLIGETGIGKTTVVQQLADS 650
                 699****************877 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.088
                  EEEEE-STTSSHHHHHHHHHHSS- CS
       SRPRB    5 avllvGlsdsGKTslftrLttdsv 28  
                   vl+ G++ sGKTs+++ L   s 
  KHJ30857.1 1079 PVLIQGPTSSGKTSMIEYLARYSG 1102
                  69**************99987655 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.061
                  --EEEEE-STTSSHHHHHHHHHHSS---B CS
       SRPRB    3 kpavllvGlsdsGKTslftrLttdsvkkt 31  
                  ++ vllvG + +GKT++ + L +  +kk 
  KHJ30857.1 1370 NEPVLLVGETGCGKTTVCQMLAESFAKKL 1398
                  5679**************99998855543 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 1.3
                  --EEEEE-STTSSHHHHHHHHHHS CS
       SRPRB    3 kpavllvGlsdsGKTslftrLttd 26  
                  ++ +ll G    GKT+l+t L   
  KHJ30857.1 1752 RKPILLEGNPGVGKTTLITALARV 1775
                  567999*************99764 PP

  == domain 6  score: 5.9 bits;  conditional E-value: 0.036
                  EEEE-STTSSHHHHHHHHH CS
       SRPRB    6 vllvGlsdsGKTslftrLt 24  
                   llvGls sGKT+l++++ 
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHIA 2083
                  599************9876 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0       1.9   4.1e+02       2      23 ..     293     314 ..     292     322 .. 0.86
   2 !    8.5   0.1     0.008       1.7       2      24 ..     630     652 ..     629     668 .. 0.86
   3 ?    6.6   0.1     0.031       6.6       2      30 ..    1373    1401 ..    1372    1412 .. 0.87
   4 !   11.1   0.0    0.0013      0.27       2      26 ..    1755    1779 ..    1754    1784 .. 0.87
   5 ?    0.0   0.1       3.2     7e+02       4      26 ..    2067    2089 ..    2065    2094 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 1.9
                 EEEE--TTSSHHHHHHHHHHHH CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlell 23 
                 +++ G pG+GKt lv+  +++l
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFAREL 314
                 6789***********9998887 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.008
                 EEEE--TTSSHHHHHHHHHHHH. CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellk 24 
                 +++ G+ G+GKtT+v+++++ l 
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLG 652
                 6788***************9994 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.031
                  EEEE--TTSSHHHHHHHHHHHH...GGGE CS
    NTPase_1    2 vfiTGppGvGKtTlvkkvlellkssgvkv 30  
                  v++ G+ G GKtT+++ ++e  +++ ++v
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFAKKLFTV 1401
                  6899***************9998876665 PP

  == domain 4  score: 11.1 bits;  conditional E-value: 0.0013
                  EEEE--TTSSHHHHHHHHHHHH... CS
    NTPase_1    2 vfiTGppGvGKtTlvkkvlellkss 26  
                  +++ G+pGvGKtTl+  +++++++s
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVCNQS 1779
                  6789***************999776 PP

  == domain 5  score: 0.0 bits;  conditional E-value: 3.2
                  EE--TTSSHHHHHHHHHHHH... CS
    NTPase_1    4 iTGppGvGKtTlvkkvlellkss 26  
                  + G +G+GKt l++ ++  + ++
  KHJ30857.1 2067 LVGLSGSGKTALLNHIAAIIGKK 2089
                  67999***********9988665 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.53   1.1e+02      42      77 ..     278     314 ..     234     328 .. 0.78
   2 ?    4.9   0.0     0.059        13      54      88 ..     628     661 ..     622     679 .. 0.76
   3 ?   -1.4   0.0         5   1.1e+03      55      93 ..    1079    1117 ..    1058    1121 .. 0.74
   4 !    7.6   0.0     0.009       1.9      54      83 ..    1371    1400 ..    1347    1480 .. 0.85
   5 ?    6.5   0.0     0.019       4.2      54      89 ..    1753    1787 ..    1725    1797 .. 0.73
   6 ?   -1.4   0.1       4.8     1e+03      56      78 ..    2065    2087 ..    2060    2096 .. 0.80
   7 ?    2.0   0.1      0.45        98     179     218 ..    2346    2386 ..    2323    2403 .. 0.74

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.53
      DUF815  42 enteqflegl.pannvLLwGarGtGKSslvkallney 77 
                  n e+f+e l +++ +LL G  G+GK  lv    +e+
  KHJ30857.1 278 MNMENFAEALlSSSPILLHGLPGSGKTLLVNDFAREL 314
                 478899988625678************9998777665 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.059
      DUF815  54 nnvLLwGarGtGKSslvkallneyaeegLrlieve 88 
                 + +LL+G+ G GK ++v+ l  ++   +L +++++
  KHJ30857.1 628 EPILLIGETGIGKTTVVQQLADSLGY-KLVVVNLS 661
                 569***************99877654.34455554 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 5
      DUF815   55 nvLLwGarGtGKSslvkallneyaeegLrlievekedlk 93  
                   vL+ G   +GK s++  l +   ++ +r+ + e++dl+
  KHJ30857.1 1079 PVLIQGPTSSGKTSMIEYLARYSGNKCVRINNHEHTDLQ 1117
                  599**************9998888888888776666665 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.009
      DUF815   54 nnvLLwGarGtGKSslvkallneyaeegLr 83  
                  + vLL+G+ G+GK ++++ l +++a++   
  KHJ30857.1 1371 EPVLLVGETGCGKTTVCQMLAESFAKKLFT 1400
                  459****************99999987654 PP

  == domain 5  score: 6.5 bits;  conditional E-value: 0.019
      DUF815   54 nnvLLwGarGtGKSslvkallneyaeegLrlievek 89  
                  + +LL G+ G+GK +l+ al + +++++L  i++++
  KHJ30857.1 1753 KPILLEGNPGVGKTTLITALAR-VCNQSLTRINLSE 1787
                  469**************99865.5566666666654 PP

  == domain 6  score: -1.4 bits;  conditional E-value: 4.8
      DUF815   56 vLLwGarGtGKSslvkallneya 78  
                   LL+G  G+GK +l+  + + + 
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHIAAIIG 2087
                  59***********9988776555 PP

  == domain 7  score: 2.0 bits;  conditional E-value: 0.45
      DUF815  179 klsLsdRFGlwlgFykldqeeYleiveklakklglelek...e 218 
                   lsL  RF  ++ F +   +++l++ve++++ ++ +++k   +
  KHJ30857.1 2346 DLSLVKRFVSSFNFLQ--INDFLNLVETYISIYDDPTNKklrS 2386
                  699*****87766665..579*********9998888763433 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.088        19      11      42 ..     284     315 ..     275     342 .. 0.68
   2 ?   -1.1   0.0       5.9   1.3e+03      16      41 ..     626     651 ..     614     669 .. 0.73
   3 ?    4.2   0.0      0.15        32      18      41 ..    1078    1101 ..    1061    1128 .. 0.76
   4 ?    2.0   0.0      0.68   1.5e+02      10      44 ..    1363    1397 ..    1353    1435 .. 0.73
   5 ?    7.9   0.0     0.011       2.3      12      44 ..    1747    1779 ..    1738    1805 .. 0.79
   6 ?   -1.0   0.0       5.8   1.3e+03      77     178 ..    2089    2192 ..    2058    2201 .. 0.62

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.088
      AAA_11  11 ksalseseitliqGPPGtgKTktivellsqll 42 
                 ++al +s+  l++G PG+gKT  +  + ++l 
  KHJ30857.1 284 AEALLSSSPILLHGLPGSGKTLLVNDFARELG 315
                 4444444448***********99999998884 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 5.9
      AAA_11  16 eseitliqGPPGtgKTktivellsql 41 
                  se  l+ G  G gKT+++ +l  +l
  KHJ30857.1 626 YSEPILLIGETGIGKTTVVQQLADSL 651
                 44446888999********9998887 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.15
      AAA_11   18 eitliqGPPGtgKTktivellsql 41  
                    +liqGP  +gKT++i +l ++ 
  KHJ30857.1 1078 YPVLIQGPTSSGKTSMIEYLARYS 1101
                  368**************9999887 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.68
      AAA_11   10 iksalseseitliqGPPGtgKTktivellsqllsr 44  
                  +++a++++e +l+ G  G+gKT++   l ++ +++
  KHJ30857.1 1363 VSHAIQNNEPVLLVGETGCGKTTVCQMLAESFAKK 1397
                  3889999999************9887777766533 PP

  == domain 5  score: 7.9 bits;  conditional E-value: 0.011
      AAA_11   12 salseseitliqGPPGtgKTktivellsqllsr 44  
                  +al+ ++  l++G PG gKT+ i++l ++ +++
  KHJ30857.1 1747 RALQVRKPILLEGNPGVGKTTLITALARVCNQS 1779
                  5666666689****************9999644 PP

  == domain 6  score: -1.0 bits;  conditional E-value: 5.8
      AAA_11   77 glldsegekykpkivRvgneeeriseavksvsleekvekrlekeekaqlakeiskeleklakelrafeeeeek...eklkkskekskskleqerrkl 170 
                  +l++ + ++ +  +  +g  e +++++    sl e++e  ++++   +l++++ +e + l+++ +++   +++   +  +k ++  ++ + q+ ++l
  KHJ30857.1 2089 KLVNLSLNSDTDTMDLIGGYE-QADPRRTFASLCEELETLMNQKLLSTLSSQLPQEAKYLEEMKNNERLPFQNmlsNLAQKVSQIGSQVNIQDFEDL 2184
                  555555555555566666666.566666677777889999999888888888888888888888777666666554222233333333333444444 PP

      AAA_11  171 kkerkels 178 
                   +  ++ls
  KHJ30857.1 2185 AQRFHTLS 2192
                  44444444 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0      0.18        38      22      41 ..     292     311 ..     277     318 .. 0.77
   2 ?    5.4   0.0     0.041       8.8      23     121 ..     630     722 ..     613     743 .. 0.63
   3 ?    5.1   0.0     0.052        11      23      45 ..    1373    1395 ..    1358    1464 .. 0.73
   4 ?    3.6   0.0      0.15        32      23      40 ..    1755    1772 ..    1745    1782 .. 0.84
   5 ?    1.3   0.1      0.76   1.6e+02      24      41 ..    2066    2083 ..    2054    2088 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.18
                 EEEEEESTTSSHHHHHHHHC CS
      NB-ARC  22 vvalvGmgGvGKttlakqil 41 
                  + l+G +G+GKt l+++  
  KHJ30857.1 292 PILLHGLPGSGKTLLVNDFA 311
                 4789**********998765 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.041
                 EEEEESTTSSHHHHHHHHCCSHCCCCCCBTEEEEEEEESXXHHHHHHHXX...HHHHHCCCTTSSSS-STTSHHHHHHHHCCCTTEEEEEEEE-SHHHH CS
      NB-ARC  23 valvGmgGvGKttlakqilnksdevegrFdsvawvvvsktdkseeileti...lkeLslseddleekeeveslkrklvrlLltkrfllvlDDVweeedw 118
                 + l G  G+GKtt+++q   +       +  ++ v +s++++  ++l +    + + sl++   +e++e     +    + +++++l +lD  + +e+w
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADS-----LGYK-LVVVNLSQQSEVGDLLGSFkpiNIK-SLANPLKDEFDELF-TLTG-LSATRNQKYLELLDKCFRKEQW 719
                 6789*************9877.....3443.3446777777777766543110211.12333444444444.2222.2344555677777777777777 PP

                 ... CS
      NB-ARC 119 dki 121
                 +k 
  KHJ30857.1 720 NKF 722
                 665 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.052
                  EEEEESTTSSHHHHHHHHCCSHC CS
      NB-ARC   23 valvGmgGvGKttlakqilnksd 45  
                  v lvG  G+GKtt+ +   ++++
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFA 1395
                  789**********9998777654 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.15
                  EEEEESTTSSHHHHHHHH CS
      NB-ARC   23 valvGmgGvGKttlakqi 40  
                  + l G +GvGKttl++  
  KHJ30857.1 1755 ILLEGNPGVGKTTLITAL 1772
                  6689**********9765 PP

  == domain 5  score: 1.3 bits;  conditional E-value: 0.76
                  EEEESTTSSHHHHHHHHC CS
      NB-ARC   24 alvGmgGvGKttlakqil 41  
                   lvG  G+GKt l+++i 
  KHJ30857.1 2066 LLVGLSGSGKTALLNHIA 2083
                  689**********99885 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0       2.9   6.2e+02       1      26 [.     293     318 ..     293     343 .. 0.77
   2 ?    6.5   0.0     0.032       6.8       4      27 ..     633     656 ..     630     689 .. 0.88
   3 ?    4.5   0.0      0.13        28       2      34 ..    1081    1113 ..    1080    1153 .. 0.78
   4 ?    5.5   0.0     0.061        13       5      34 ..    1377    1406 ..    1373    1444 .. 0.85
   5 ?    7.7   0.0     0.013       2.9       1      23 [.    1755    1777 ..    1755    1789 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 2.9
                 EEEEESTTSSHHHHHHHHHCCSTCEE CS
         dNK   1 ivveGnIgaGKstlvklLskklgvkv 26 
                 i + G  g+GK+ lv+ ++++lg   
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELGLAS 318
                 5678999*************999554 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.032
                 EESTTSSHHHHHHHHHCCSTCEEE CS
         dNK   4 eGnIgaGKstlvklLskklgvkvf 27 
                  G  g GK+t+v++L++ lg+k +
  KHJ30857.1 633 IGETGIGKTTVVQQLADSLGYKLV 656
                 5899****************8865 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.13
                  EEEESTTSSHHHHHHHHHCCSTCEEEE-HHHHC CS
         dNK    2 vveGnIgaGKstlvklLskklgvkvfeEpvdkw 34  
                   ++G+ ++GK+++++ L++  g k+++  + + 
  KHJ30857.1 1081 LIQGPTSSGKTSMIEYLARYSGNKCVRINNHEH 1113
                  599******************999987665555 PP

  == domain 4  score: 5.5 bits;  conditional E-value: 0.061
                  ESTTSSHHHHHHHHHCCSTCEEEE-HHHHC CS
         dNK    5 GnIgaGKstlvklLskklgvkvfeEpvdkw 34  
                  G  g+GK+t+ ++L++ +  k f+    ++
  KHJ30857.1 1377 GETGCGKTTVCQMLAESFAKKLFTVNAHQN 1406
                  899*************99888877555555 PP

  == domain 5  score: 7.7 bits;  conditional E-value: 0.013
                  EEEEESTTSSHHHHHHHHHCCST CS
         dNK    1 ivveGnIgaGKstlvklLskklg 23  
                  i +eGn g+GK+tl++ L++ ++
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVCN 1777
                  679****************9986 PP

>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.37        81      22     156 ..     256     395 ..     241     415 .. 0.71
   2 ?    1.7   0.0      0.53   1.1e+02      59      81 ..     629     651 ..     616     669 .. 0.75
   3 ?    5.4   0.0      0.04       8.6      53      91 ..    1366    1404 ..    1324    1430 .. 0.84
   4 ?    4.1   0.0     0.097        21      59      98 ..    1754    1792 ..    1738    1878 .. 0.87
   5 ?    3.0   0.0      0.21        45      53      83 ..    2058    2088 ..    2043    2101 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.37
                 SSTTSSS-HHHHHHHHHHHH---EBBBSSSSBBCSS-EEEEEESSTSTHHHHHHHHHHHS...SSEEEEE.SSSSSSSHSSSEEEEESSSSSEEEEETH CS
         MCM  22 iapsiyghedvkkaillqlfggvkkkledktklrgdinvllvgdpgtaKsqlLkyvekla...pravyts.gkgssaagLtaavvrdeetgefvleaGa 116
                 + p++ g+ +   +i+  l + ++ ++     l ++  +ll g pg +K+ l++  ++ +   ++ v     +++ a  L       ++ g f  + G 
  KHJ30857.1 256 LLPRLNGTPSSSSSIVKVLTSNMNMEN-FAEALLSSSPILLHGLPGSGKTLLVNDFARELglaSTMVTLHlNEQTDAKVLIGVYATGSNPGSFEWKPGV 353
                 566666666666666666666655433.3356888999**************99887654110333333314455566678888888899999****** PP

                 HHHT.TTS.EEEEESGGGSTCHHHHHHHHHHHHSEEEEESSS CS
         MCM 117 lvla.dkG.vcciDefdkmkeedrsalhEamEqqtisiaKaG 156
                 l +a  +G  + i ++d+  ++  s ++  +E+ +++i   G
  KHJ30857.1 354 LTTAvKEGrWIFIEDIDRAPNDVISLILSLVERRELHIPNRG 395
                 *98843453789********9999999999999999997666 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.53
                 EEEEEESSTSTHHHHHHHHHHHS CS
         MCM  59 nvllvgdpgtaKsqlLkyvekla 81 
                  +ll+g+ g++K+++++++++ +
  KHJ30857.1 629 PILLIGETGIGKTTVVQQLADSL 651
                 59**************9987654 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.04
                  BBCSS-EEEEEESSTSTHHHHHHHHHHHSSSEEEEESSS CS
         MCM   53 klrgdinvllvgdpgtaKsqlLkyveklapravytsgkg 91  
                   ++ +  vllvg+ g++K+++ +++++ + +  +t  ++
  KHJ30857.1 1366 AIQNNEPVLLVGETGCGKTTVCQMLAESFAKKLFTVNAH 1404
                  5667778*****************999888888876544 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.097
                  EEEEEESSTSTHHHHHHHHHHHSSSEEEEESSSSSSSHSS CS
         MCM   59 nvllvgdpgtaKsqlLkyveklapravytsgkgssaagLt 98  
                   +ll g+pg++K++l+ +++++ +++  t ++ s +++Lt
  KHJ30857.1 1754 PILLEGNPGVGKTTLITALARVCNQS-LTRINLSEHSDLT 1792
                  589****************9887765.5677777777776 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.21
                  BBCSS-EEEEEESSTSTHHHHHHHHHHHSSS CS
         MCM   53 klrgdinvllvgdpgtaKsqlLkyveklapr 83  
                   ++ +i  llvg +g +K++lL+++++++ +
  KHJ30857.1 2058 CIQQNIPCLLVGLSGSGKTALLNHIAAIIGK 2088
                  5778999******************988755 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0      0.16        35      48      79 ..     288     319 ..     277     329 .. 0.82
   2 ?    2.5   0.1      0.31        68      49      84 ..     626     661 ..     613     667 .. 0.82
   3 ?    0.1   0.0       1.6   3.5e+02      39      67 ..    1066    1094 ..    1062    1108 .. 0.77
   4 ?    3.0   0.0      0.22        48      51     116 ..    1371    1446 ..    1343    1488 .. 0.65
   5 ?    6.3   0.0     0.023       4.9      41      79 ..    1744    1781 ..    1727    1799 .. 0.82
   6 ?    2.9   0.1      0.24        53      53      80 ..    2065    2092 ..    2055    2099 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.16
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  48 laGravLlaGpsgtGktalaiaiskelgedvp 79 
                 l+   +Ll G +g+Gkt l    ++elg    
  KHJ30857.1 288 LSSSPILLHGLPGSGKTLLVNDFARELGLAST 319
                 667789*********************95544 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.31
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  49 aGravLlaGpsgtGktalaiaiskelgedvpfvals 84 
                     +Ll G++g Gkt +   ++ +lg ++  v ls
  KHJ30857.1 626 YSEPILLIGETGIGKTTVVQQLADSLGYKLVVVNLS 661
                 55679**********************988777765 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 1.6
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49   39 ivelikekklaGravLlaGpsgtGktala 67  
                  i++l+++       vL++Gp+++Gkt++ 
  KHJ30857.1 1066 ILNLVRAISTRRYPVLIQGPTSSGKTSMI 1094
                  56677766666667************986 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.22
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-S- CS
       TIP49   51 ravLlaGpsgtGktalaiaiskelgedvpfva..........lsgsevyslevkktevltqalrksigvrikeeke 116 
                    vLl+G++g Gkt +   +++++++++  v           + +    ++  + +e+l+qal k++ +  k++++
  KHJ30857.1 1371 EPVLLVGETGCGKTTVCQMLAESFAKKLFTVNahqntetgdlIGAQRPVRNRAEVAEILMQALLKALSLCDKDITD 1446
                  569************9988888888765433211111111112222234455566677777777776666665555 PP

  == domain 5  score: 6.3 bits;  conditional E-value: 0.023
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49   41 elikekklaGravLlaGpsgtGktalaiaiskelgedvp 79  
                  +++++ ++  + +Ll G++g Gkt l  a+++  ++++ 
  KHJ30857.1 1744 RIVRALQVR-KPILLEGNPGVGKTTLITALARVCNQSLT 1781
                  566666665.99*******************98887654 PP

  == domain 6  score: 2.9 bits;  conditional E-value: 0.24
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49   53 vLlaGpsgtGktalaiaiskelgedvpf 80  
                   Ll+G sg+Gktal   i+  +g+++  
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHIAAIIGKKLVN 2092
                  5899***********99*9999988755 PP

>> AAA_8  P-loop containing dynein motor region D4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       6.5   1.4e+03      27      60 ..     630     663 ..     627     674 .. 0.79
   2 ?    2.7   0.0      0.31        68      12      66 ..    1065    1119 ..    1061    1127 .. 0.91
   3 !    7.8   0.1    0.0085       1.8      22     129 ..    1368    1474 ..    1350    1488 .. 0.66
   4 ?    2.5   0.0      0.36        78      14      67 ..    1743    1796 ..    1739    1829 .. 0.86
   5 ?    7.4   0.1     0.011       2.4      22      62 ..    2060    2100 ..    2055    2105 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 6.5
       AAA_8  27 aLlvGvgGsGrqsltkLAafiaelelfqievtkk 60 
                 +Ll+G  G G+ ++++  a  ++++l+ ++++++
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLGYKLVVVNLSQQ 663
                 69*********99987666666788888777776 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.31
       AAA_8   12 hlarilRvlrqprghaLlvGvgGsGrqsltkLAafiaelelfqievtkkykekef 66  
                   ++ ++R +++ r  +L+ G   sG+ s+++  a  ++ ++++i+ +++ + +e+
  KHJ30857.1 1065 NILNLVRAISTRRYPVLIQGPTSSGKTSMIEYLARYSGNKCVRINNHEHTDLQEY 1119
                  578899*************************999999*******99999888876 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0085
       AAA_8   22 qprghaLlvGvgGsGrqsltkLAafiaelelfqievtkkykekefredlkkllkkagikqkevvfllsdnqiieesfle..dinnlLntGevpnLfs 116 
                  q++  +LlvG  G+G+ +++++ a     +lf+++ +++ ++ +     + + ++a + +  +  ll+   + ++++ +  din lL++ +    + 
  KHJ30857.1 1368 QNNEPVLLVGETGCGKTTVCQMLAESFAKKLFTVNAHQNTETGDLIGAQRPVRNRAEVAEILMQALLKALSLCDKDITDkyDINILLKSYQS---LR 1461
                  556679***************99999999*********999988765555555555544444444444444444444432267777766443...55 PP

       AAA_8  117 keekeeiieelrk 129 
                  +ee ++i +e++k
  KHJ30857.1 1462 EEEVSKIPSEIHK 1474
                  5666666666655 PP

  == domain 4  score: 2.5 bits;  conditional E-value: 0.36
       AAA_8   14 arilRvlrqprghaLlvGvgGsGrqsltkLAafiaelelfqievtkkykeke.fr 67  
                  +ri+R l+  r  +Ll G  G G+ +l++  a +++++l +i+++++ +  + f 
  KHJ30857.1 1743 MRIVRALQV-RKPILLEGNPGVGKTTLITALARVCNQSLTRINLSEHSDLTDlFG 1796
                  688888876.5579999**********999999***********99988766455 PP

  == domain 5  score: 7.4 bits;  conditional E-value: 0.011
       AAA_8   22 qprghaLlvGvgGsGrqsltkLAafiaelelfqievtkkyk 62  
                  q++  +LlvG+ GsG+  l +  a i + +l++++++++ +
  KHJ30857.1 2060 QQNIPCLLVGLSGSGKTALLNHIAAIIGKKLVNLSLNSDTD 2100
                  566679************98877778888999988887665 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       5.9   1.3e+03       3      26 ..     297     320 ..     295     333 .. 0.75
   2 ?    1.1   0.0       1.3   2.8e+02       6      24 ..     637     655 ..     634     673 .. 0.73
   3 ?   -1.1   0.0         6   1.3e+03       3      47 ..    1084    1125 ..    1082    1150 .. 0.66
   4 !    8.9   0.0     0.005       1.1       6      45 ..    1380    1416 ..    1377    1440 .. 0.78
   5 ?    5.0   0.0      0.08        17       1      27 [.    1757    1783 ..    1757    1794 .. 0.84
   6 ?   -1.0   0.0       5.5   1.2e+03       3      24 ..    2069    2090 ..    2068    2110 .. 0.83
   7 ?   -0.0   0.0       2.8   6.1e+02      74     140 ..    2211    2288 ..    2205    2298 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 5.9
                      ESTTSSHHHHHHHHHHHHHHTTE. CS
  Thymidylate_kin   3 GlDGaGKttqaellkerlkeegik 26 
                      Gl G+GKt  ++ +++ l  +  +
       KHJ30857.1 297 GLPGSGKTLLVNDFARELGLASTM 320
                      999********9999988666655 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 1.3
                      TSSHHHHHHHHHHHHHHTT CS
  Thymidylate_kin   6 GaGKttqaellkerlkeeg 24 
                      G GKtt+++ l++ l  + 
       KHJ30857.1 637 GIGKTTVVQQLADSLGYKL 655
                      99**********9985544 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 6
                       ESTTSSHHHHHHHHHHHHHHTTE.EEEESSSTTSHHHHHHHHHHH CS
  Thymidylate_kin    3 GlDGaGKttqaellkerlkeegikvvltrepggteiGekirelll 47  
                       G   +GKt+++e+l+++  +++ + + ++  + t++ e + ++++
       KHJ30857.1 1084 GPTSSGKTSMIEYLARYSGNKCVR-INNH--EHTDLQEYLGSYVS 1125
                       66679**********998888854.3333..34555555555555 PP

  == domain 4  score: 8.9 bits;  conditional E-value: 0.005
                       TSSHHHHHHHHHHHHHHTTE.EEEESSSTTSHHHHHHHHH CS
  Thymidylate_kin    6 GaGKttqaellkerlkeegikvvltrepggteiGekirel 45  
                       G GKtt++++l+e + ++    ++    ++te+G++i ++
       KHJ30857.1 1380 GCGKTTVCQMLAESFAKKL---FTVNAHQNTETGDLIGAQ 1416
                       89**************999...467778889999999776 PP

  == domain 5  score: 5.0 bits;  conditional E-value: 0.08
                       EEESTTSSHHHHHHHHHHHHHHTTE.E CS
  Thymidylate_kin    1 iEGlDGaGKttqaellkerlkeegikv 27  
                       +EG  G+GKtt + +l++ ++++  ++
       KHJ30857.1 1757 LEGNPGVGKTTLITALARVCNQSLTRI 1783
                       69999***************9987665 PP

  == domain 6  score: -1.0 bits;  conditional E-value: 5.5
                       ESTTSSHHHHHHHHHHHHHHTT CS
  Thymidylate_kin    3 GlDGaGKttqaellkerlkeeg 24  
                       Gl G+GKt  ++ +++ + ++ 
       KHJ30857.1 2069 GLSGSGKTALLNHIAAIIGKKL 2090
                       899*********9998876665 PP

  == domain 7  score: -0.0 bits;  conditional E-value: 2.8
                       HHHHHTT-EEEEES-.HHHHHHHHHTTTTTTCHHHHHHGGGTTS.........E-SEEEEEESSHHH.HHTSCCTTSS CS
  Thymidylate_kin   74 kpalkqgktvivdRy.lfSslaYqgakegvdldlvlslnedvll.........kPdltflldvdpev.alkRlakrde 140 
                        +al++g+++i+d + l S  +++ + + ++ +  l++ne+ +           Pd+ +++ +dp+  +l R++++++
       KHJ30857.1 2211 VKALEEGQWLILDNAnLCSASVLDRINSLLEPNGHLCINEQCGQdgkprivepHPDFRIFMTMDPRFgELSRAMRNRS 2288
                       578999999999987466788899999989999999999988777766677778899999999988524677776665 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0      0.19        40      10      32 ..     623     645 ..     617     657 .. 0.84
   2 ?    3.0   0.0      0.36        77      16      31 ..    1079    1094 ..    1066    1107 .. 0.82
   3 !    9.9   0.0    0.0026      0.56       9      75 ..    1365    1692 ..    1354    1722 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.19
                 HHHTTCEEEEEESTTSSHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  10 lilgggdvlvaaeTGsGKTlafl 32 
                 +i+  + +l+ +eTG GKT++ +
  KHJ30857.1 623 AIIYSEPILLIGETGIGKTTVVQ 645
                 566678899**********9965 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.36
                  EEEEEESTTSSHHHHH CS
                  xxxxxxxxxxxxxxxx RF
        DEAD   16 dvlvaaeTGsGKTlaf 31  
                   vl++++T sGKT + 
  KHJ30857.1 1079 PVLIQGPTSSGKTSMI 1094
                  699**********875 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.0026
                  HHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS........TTSTS.................................................. CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxx.................................................. RF
        DEAD    9 plilgggdvlvaaeTGsGKTlaflipvlqivyet........kgktg.................................................. 47  
                  ++i +++ vl+ +eTG GKT++ ++ +  +++++        +   +                                                  
  KHJ30857.1 1365 HAIQNNEPVLLVGETGCGKTTVCQMLAE-SFAKKlftvnahqN---Tetgdligaqrpvrnraevaeilmqallkalslcdkditdkydinillksy 1457
                  45668899**************766554.55444566654322...135677788888888888888888888888888888888888888888888 PP

                  ................................................................................................. CS
                  ................................................................................................. RF
        DEAD   48 ................................................................................................. 47  
                                                                                                                   
  KHJ30857.1 1458 qslreeevskipseihktinsnrakmnalfewcdgglvqamregqfflldeislagdailerlnsvletertillaekgiedsfvkavdgfqifatm 1554
                  8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 PP

                  ................................................................................................. CS
                  ................................................................................................. RF
        DEAD   48 ................................................................................................. 47  
                                                                                                                   
  KHJ30857.1 1555 npggdygkrelspalrnrfteiwvpplsdqndihiivqsklnqkfktfsramvqfaewfahkyrhssitsisirdmltwvrfindccshnayfslvq 1651
                  8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 PP

                  .............-EEEEEESSHHHHHHHHHHHHHHTTTST CS
                  .............xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   48 .............pkalivePtreLaeqtlnnlkkfkkyid 75  
                               p al++  +++++eq ++ l++++  ++
  KHJ30857.1 1652 gaamvyidtlganPAALFLDNSESIMEQRIKCLQQLGILLN 1692
                  88888888888888888888888888887777777776555 PP

>> Bac_DnaA  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0       3.2   6.8e+02      34      55 ..     290     311 ..     276     319 .. 0.83
   2 ?    3.9   0.0      0.19        41      34      56 ..     627     649 ..     602     681 .. 0.84
   3 ?    3.1   0.0      0.33        71      29      58 ..    1365    1394 ..    1353    1403 .. 0.80
   4 ?    4.1   0.0      0.17        37      35      61 ..    1753    1779 ..    1739    1786 .. 0.85
   5 ?    3.5   0.0      0.25        54      36      61 ..    2064    2089 ..    2056    2097 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 3.2
                 S--EEEE-SSSSSHHHHHHHHH CS
    Bac_DnaA  34 ynPlfiygevGlGktHLlkaig 55 
                   P++++g  G Gkt L++  +
  KHJ30857.1 290 SSPILLHGLPGSGKTLLVNDFA 311
                 57*************9998765 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.19
                 S--EEEE-SSSSSHHHHHHHHHH CS
    Bac_DnaA  34 ynPlfiygevGlGktHLlkaign 56 
                   P+++ ge+G+Gkt +++ ++ 
  KHJ30857.1 627 SEPILLIGETGIGKTTVVQQLAD 649
                 47*************99998765 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.33
                  STTT.S--EEEE-SSSSSHHHHHHHHHHHH CS
    Bac_DnaA   29 apgkkynPlfiygevGlGktHLlkaignev 58  
                  ++ ++  P+++ ge+G Gkt + + ++   
  KHJ30857.1 1365 HAIQNNEPVLLVGETGCGKTTVCQMLAESF 1394
                  4556678*************9998887665 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.17
                  --EEEE-SSSSSHHHHHHHHHHHHHHH CS
    Bac_DnaA   35 nPlfiygevGlGktHLlkaignevlen 61  
                   P+++ g+ G+Gkt L+ a++    ++
  KHJ30857.1 1753 KPILLEGNPGVGKTTLITALARVCNQS 1779
                  69*****************99877665 PP

  == domain 5  score: 3.5 bits;  conditional E-value: 0.25
                  -EEEE-SSSSSHHHHHHHHHHHHHHH CS
    Bac_DnaA   36 PlfiygevGlGktHLlkaignevlen 61  
                  P+++ g +G Gkt Ll+ i+  + ++
  KHJ30857.1 2064 PCLLVGLSGSGKTALLNHIAAIIGKK 2089
                  9*****************99887665 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0      0.35        76       6      33 ..     634     658 ..     630     843 .. 0.82
   2 ?    6.0   0.2     0.053        11       6      29 ..    1377    1400 ..    1373    1404 .. 0.85
   3 ?    5.8   0.0     0.062        13       9      25 ..    1762    1778 ..    1755    1844 .. 0.93
   4 ?    1.9   0.0      0.99   2.1e+02       8      38 ..    2071    2100 ..    2065    2237 .. 0.71

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.35
                 SSTTSSHHHHHHHHHHHHHHTT--EEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA   6 tkGGvGKTtlaanLaralarrglrVllv 33 
                 +  G GKTt++  La +l     + ++v
  KHJ30857.1 634 GETGIGKTTVVQQLADSLGY---KLVVV 658
                 6789***********98865...55555 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.053
                  SSTTSSHHHHHHHHHHHHHHTT-- CS
                  xxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA    6 tkGGvGKTtlaanLaralarrglr 29  
                  +  G GKTt++  La ++a++ + 
  KHJ30857.1 1377 GETGCGKTTVCQMLAESFAKKLFT 1400
                  678****************97555 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.062
                  TSSHHHHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxx RF
        CbiA    9 GvGKTtlaanLaralar 25  
                  GvGKTtl ++Lar  ++
  KHJ30857.1 1762 GVGKTTLITALARVCNQ 1778
                  9***********98776 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.99
                  TTSSHHHHHHHHHHHHHHTT--EEEEEEEES CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA    8 GGvGKTtlaanLaralarrglrVllvDaDpq 38  
                  +G+GKT l+ ++a+++ + +l  l +  D++
  KHJ30857.1 2071 SGSGKTALLNHIAAIIGK-KLVNLSLNSDTD 2100
                  9************99988.555555555555 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   4.1       1.8   3.9e+02      23      45 ..     631     653 ..     627     793 .. 0.69
   2 ?    4.9   0.0      0.15        33      22      40 ..    1080    1098 ..    1073    1178 .. 0.87
   3 ?    7.1   0.0     0.033       7.1      22      36 ..    1373    1387 ..    1364    1398 .. 0.89
   4 ?    4.3   0.0      0.24        51      23      45 ..    1756    1778 ..    1751    1800 .. 0.82
   5 !    9.1   0.0     0.008       1.7      23      64 ..    2066    2114 ..    2064    2218 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 1.8
      AAA_23  23 lItGpNGaGKTTildAiklaLyg 45 
                 l++G++G GKTT+++ +   L+ 
  KHJ30857.1 631 LLIGETGIGKTTVVQQLADSLGY 653
                 899*********99888777755 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.15
      AAA_23   22 tlItGpNGaGKTTildAik 40  
                  +lI Gp+ +GKT+ ++ + 
  KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLA 1098
                  59*************9876 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.033
      AAA_23   22 tlItGpNGaGKTTil 36  
                  +l++G++G+GKTT+ 
  KHJ30857.1 1373 VLLVGETGCGKTTVC 1387
                  589**********85 PP

  == domain 4  score: 4.3 bits;  conditional E-value: 0.24
      AAA_23   23 lItGpNGaGKTTildAiklaLyg 45  
                  l+ G+ G GKTT++ A+  ++  
  KHJ30857.1 1756 LLEGNPGVGKTTLITALARVCNQ 1778
                  677999**********9877765 PP

  == domain 5  score: 9.1 bits;  conditional E-value: 0.008
      AAA_23   23 lItGpNGaGKTTildAiklaLygetprlsrks.......grgfeksdve 64  
                  l++G  G+GKT++l+ i  + + +  +ls +s        +g+e++d++
  KHJ30857.1 2066 LLVGLSGSGKTALLNHIAAIIGKKLVNLSLNSdtdtmdlIGGYEQADPR 2114
                  789*****************99998777776655566554455555555 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.061        13       4      23 ..     294     313 ..     292     339 .. 0.75
   2 ?    1.5   0.1      0.89   1.9e+02       4      32 ..     631     658 ..     629     670 .. 0.77
   3 ?    1.0   0.0       1.3   2.8e+02       4      24 ..    1081    1101 ..    1079    1119 .. 0.77
   4 ?    0.6   0.0       1.7   3.6e+02       4      22 ..    1374    1392 ..    1372    1409 .. 0.79
   5 ?    5.4   0.0     0.058        13       4      22 ..    1756    1775 ..    1754    1785 .. 0.80
   6 !    8.1   0.2    0.0084       1.8       4      21 ..    2066    2083 ..    2064    2096 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.061
                 EEEESTTCCHHHHHHHHHCT CS
        cobW   4 vltGflGsGKTtLlnhllen 23 
                 +l G +GsGKT L+n   ++
  KHJ30857.1 294 LLHGLPGSGKTLLVNDFARE 313
                 689************98744 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.89
                 EEEESTTCCHHHHHHHHHCT--SS-EEEE CS
        cobW   4 vltGflGsGKTtLlnhllenraglklavi 32 
                 +l G  G GKTt++++l +   g+kl v+
  KHJ30857.1 631 LLIGETGIGKTTVVQQLADS-LGYKLVVV 658
                 678999*********99744.67776554 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 1.3
                  EEEESTTCCHHHHHHHHHCT- CS
        cobW    4 vltGflGsGKTtLlnhllenr 24  
                  ++ G+  sGKT++++ l + +
  KHJ30857.1 1081 LIQGPTSSGKTSMIEYLARYS 1101
                  689999*********998553 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 1.7
                  EEEESTTCCHHHHHHHHHC CS
        cobW    4 vltGflGsGKTtLlnhlle 22  
                  +l+G  G GKTt+ + l e
  KHJ30857.1 1374 LLVGETGCGKTTVCQMLAE 1392
                  689*********8777664 PP

  == domain 5  score: 5.4 bits;  conditional E-value: 0.058
                  EEEESTTCCHHHHHHHHH.C CS
        cobW    4 vltGflGsGKTtLlnhll.e 22  
                  +l G +G GKTtL+++l   
  KHJ30857.1 1756 LLEGNPGVGKTTLITALArV 1775
                  6899**********999842 PP

  == domain 6  score: 8.1 bits;  conditional E-value: 0.0084
                  EEEESTTCCHHHHHHHHH CS
        cobW    4 vltGflGsGKTtLlnhll 21  
                  +l+G  GsGKT+Llnh+ 
  KHJ30857.1 2066 LLVGLSGSGKTALLNHIA 2083
                  689*************97 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       4.6     1e+03       3      17 ..     297     311 ..     295     323 .. 0.81
   2 ?    5.9   0.1     0.043       9.3       2      32 ..     633     660 ..     632     665 .. 0.85
   3 ?   -0.1   0.0         3   6.6e+02       2      19 ..    1083    1100 ..    1082    1109 .. 0.83
   4 ?    5.8   0.1     0.048        10       2      23 ..    1376    1397 ..    1375    1404 .. 0.83
   5 ?    7.3   0.0     0.017       3.6       3      32 ..    1759    1785 ..    1757    1788 .. 0.87
   6 ?    2.5   0.1       0.5   1.1e+02       2      32 ..    2068    2093 ..    2067    2107 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 4.6
  ATP_bind_1   3 GpaGsGKttfvgals 17 
                 G +GsGKt +v+ ++
  KHJ30857.1 297 GLPGSGKTLLVNDFA 311
                 99********99876 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.043
  ATP_bind_1   2 vGpaGsGKttfvgalseilelrgrsvavvNL 32 
                 +G  G GKtt v++l++ l   g+++ vvNL
  KHJ30857.1 633 IGETGIGKTTVVQQLADSL---GYKLVVVNL 660
                 899*********9998765...566999999 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 3
  ATP_bind_1    2 vGpaGsGKttfvgalsei 19  
                   Gp +sGKt++++ l+ +
  KHJ30857.1 1083 QGPTSSGKTSMIEYLARY 1100
                  69**********988776 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.048
  ATP_bind_1    2 vGpaGsGKttfvgalseilelr 23  
                  vG  G GKtt ++ l+e + ++
  KHJ30857.1 1376 VGETGCGKTTVCQMLAESFAKK 1397
                  899*************998876 PP

  == domain 5  score: 7.3 bits;  conditional E-value: 0.017
  ATP_bind_1    3 GpaGsGKttfvgalseilelrgrsvavvNL 32  
                  G +G+GKtt++ al+ +++++   +  +NL
  KHJ30857.1 1759 GNPGVGKTTLITALARVCNQS---LTRINL 1785
                  899***************998...666665 PP

  == domain 6  score: 2.5 bits;  conditional E-value: 0.5
  ATP_bind_1    2 vGpaGsGKttfvgalseilelrgrsvavvNL 32  
                  vG  GsGKt + + ++ i+ ++     +vNL
  KHJ30857.1 2068 VGLSGSGKTALLNHIAAIIGKK-----LVNL 2093
                  899*************999988.....7776 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0       0.1        22      16      57 ..     268     308 ..     256     316 .. 0.80
   2 ?    3.6   0.0      0.16        35      42      63 ..     630     651 ..     605     655 .. 0.85
   3 ?   -1.5   0.0       6.1   1.3e+03      42      57 ..    1080    1095 ..    1068    1097 .. 0.85
   4 ?    4.0   0.0      0.13        28      37      64 ..    1369    1395 ..    1347    1398 .. 0.79
   5 ?    2.3   0.0      0.42        90      30      58 ..    2055    2081 ..    2044    2086 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.1
                   -TTEEEEEEET.TS-EEEEEGGGS-.SEEEE--TTSSHHHHHH CS
  FtsK_SpoIIIE  16 sqlpvalgkei.sgnplvldlkkmashllvaGatgsGKStaln 57 
                   s++   l  ++ ++n  ++ l++++  +l++G +gsGK+  +n
    KHJ30857.1 268 SSIVKVLTSNMnMENFAEALLSSSP--ILLHGLPGSGKTLLVN 308
                   4444445566669999999999999..************9888 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.16
                   EEEE--TTSSHHHHHHHHHHHH CS
  FtsK_SpoIIIE  42 llvaGatgsGKStalntLilSl 63 
                   +l++G tg GK+t+++ L  Sl
    KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSL 651
                   899*************998777 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 6.1
                    EEEE--TTSSHHHHHH CS
  FtsK_SpoIIIE   42 llvaGatgsGKStaln 57  
                    +l+ G t sGK+ ++ 
    KHJ30857.1 1080 VLIQGPTSSGKTSMIE 1095
                    89**********9875 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.13
                    GS-.SEEEE--TTSSHHHHHHHHHHHHH CS
  FtsK_SpoIIIE   37 kmashllvaGatgsGKStalntLilSla 64  
                    ++   +l++G tg GK+t+ + L  S a
    KHJ30857.1 1369 NN-EPVLLVGETGCGKTTVCQMLAESFA 1395
                    33.369************9998876665 PP

  == domain 5  score: 2.3 bits;  conditional E-value: 0.42
                    EEEEEGGGS-.SEEEE--TTSSHHHHHHH CS
  FtsK_SpoIIIE   30 plvldlkkmashllvaGatgsGKStalnt 58  
                    ++++ +++ +   l++G +gsGK+  ln 
    KHJ30857.1 2055 VMICIQQNIP--CLLVGLSGSGKTALLNH 2081
                    6677778888..99***********9996 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0       1.1   2.4e+02       5      38 ..     276     309 ..     272     321 .. 0.83
   2 ?    0.4   0.0       1.7   3.7e+02      15      40 ..     623     648 ..     615     711 .. 0.70
   3 !    7.8   0.0    0.0093         2      13      43 ..    1364    1394 ..    1350    1447 .. 0.80
   4 ?    1.9   0.0      0.59   1.3e+02      10      40 ..    1743    1773 ..    1736    1787 .. 0.77
   5 ?   -0.3   0.0       2.9   6.2e+02      14      40 ..    2057    2083 ..    2048    2091 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 1.1
                 -SHHHHHHHHHHHH-SEEEEE--TTSSTTHHHHH CS
        PhoH   5 ktkeQkeylealkkndivfaiGpaGtGKtylava 38 
                  + + ++++eal +++ +   G  G+GKt+l   
  KHJ30857.1 276 SNMNMENFAEALLSSSPILLHGLPGSGKTLLVND 309
                 5677788999999999999***********9655 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 1.7
                 HHHH-SEEEEE--TTSSTTHHHHHHH CS
        PhoH  15 alkkndivfaiGpaGtGKtylavala 40 
                 a+  ++ +  iG++G GKt +  +la
  KHJ30857.1 623 AIIYSEPILLIGETGIGKTTVVQQLA 648
                 5666677889*********8755544 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0093
                  HHHHHH-SEEEEE--TTSSTTHHHHHHHHHH CS
        PhoH   13 lealkkndivfaiGpaGtGKtylavalavea 43  
                   +a+++n+ v  +G++G+GKt +  +la + 
  KHJ30857.1 1364 SHAIQNNEPVLLVGETGCGKTTVCQMLAESF 1394
                  57999****************9887766444 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.59
                  HHHHHHHHH-SEEEEE--TTSSTTHHHHHHH CS
        PhoH   10 keylealkkndivfaiGpaGtGKtylavala 40  
                   ++++al+  + +   G+ G GKt l +ala
  KHJ30857.1 1743 MRIVRALQVRKPILLEGNPGVGKTTLITALA 1773
                  578899999999999*********9877665 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 2.9
                  HHHHH-SEEEEE--TTSSTTHHHHHHH CS
        PhoH   14 ealkkndivfaiGpaGtGKtylavala 40  
                    +++n  +  +G +G+GKt l   +a
  KHJ30857.1 2057 ICIQQNIPCLLVGLSGSGKTALLNHIA 2083
                  556677778899********9865555 PP

>> Ploopntkinase3  P-loop Nucleotide Kinase3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0         5   1.1e+03       6      28 ..     293     315 ..     290     338 .. 0.77
   2 ?    1.7   0.0         1   2.2e+02       6      29 ..     630     653 ..     626     669 .. 0.83
   3 ?    4.2   0.0      0.17        37       6      35 ..    1373    1402 ..    1369    1425 .. 0.76
   4 ?    6.3   0.0     0.039       8.3       6      49 ..    1755    1796 ..    1751    1810 .. 0.74
   5 ?   -0.3   0.0       4.1   8.8e+02       7      32 ..    2066    2091 ..    2063    2105 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 5
  Ploopntkinase3   6 iylvGqPGaGkstlmaeltkgfd 28 
                     i l G PG+Gk+ l+ ++++ + 
      KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELG 315
                     7789********99998877654 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 1
  Ploopntkinase3   6 iylvGqPGaGkstlmaeltkgfdr 29 
                     i l+G+ G Gk+t++ +l++++  
      KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLGY 653
                     88****************998654 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.17
  Ploopntkinase3    6 iylvGqPGaGkstlmaeltkgfdrskveqe 35  
                      + lvG+ G+Gk+t+   l+++f ++ ++ +
      KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFAKKLFTVN 1402
                      679*******************99876532 PP

  == domain 4  score: 6.3 bits;  conditional E-value: 0.039
  Ploopntkinase3    6 iylvGqPGaGkstlmaeltkgfdrskveqeeetvphdvlvdrtt 49  
                      i l G+PG Gk+tl+++l++  ++s ++   ++  h +l+d   
      KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVCNQSLTR--INLSEHSDLTDLFG 1796
                      7899***************988877665..33577777777654 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 4.1
  Ploopntkinase3    7 ylvGqPGaGkstlmaeltkgfdrskv 32  
                       lvG  G+Gk+ l+ ++++ + ++ v
      KHJ30857.1 2066 LLVGLSGSGKTALLNHIAAIIGKKLV 2091
                      59*************99887766655 PP

>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.43        93       4      29 ..     632     657 ..     630     675 .. 0.81
   2 ?    7.4   0.0     0.015       3.3       5      29 ..    1376    1400 ..    1373    1432 .. 0.81
   3 ?    3.6   0.0      0.23        49       5      38 ..    2068    2098 ..    2066    2131 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.43
         PRK   4 vagsSGaGkttvarklekifgrekvk 29 
                 + g+ G Gkttv ++l +++g + v 
  KHJ30857.1 632 LIGETGIGKTTVVQQLADSLGYKLVV 657
                 67999***************965554 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.015
         PRK    5 agsSGaGkttvarklekifgrekvk 29  
                   g+ G+Gkttv + l ++f+++  +
  KHJ30857.1 1376 VGETGCGKTTVCQMLAESFAKKLFT 1400
                  6999***************965443 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.23
         PRK    5 agsSGaGkttvarklekifgrekvkaaeiegdsf 38  
                   g SG+Gkt++ +++  i+g++ v+     + s+
  KHJ30857.1 2068 VGLSGSGKTALLNHIAAIIGKKLVN---LSLNSD 2098
                  588*****************66655...333333 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       5.9   1.3e+03       4      23 ..     295     314 ..     293     324 .. 0.80
   2 ?    2.1   0.1      0.77   1.7e+02       3      23 ..     631     651 ..     630     664 .. 0.82
   3 ?    0.9   0.0       1.9   4.1e+02       4      32 ..    1082    1110 ..    1080    1118 .. 0.80
   4 ?    3.9   0.1      0.21        46       3      31 ..    1374    1402 ..    1373    1410 .. 0.86
   5 ?    5.5   0.0     0.068        15       4      35 ..    1757    1788 ..    1755    1794 .. 0.85
   6 ?    5.2   0.1     0.088        19       4      25 ..    2067    2088 ..    2065    2097 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 5.9
        MobB   4 ivgksgsGKTtLleklipel 23 
                 + g  gsGKT L++   +el
  KHJ30857.1 295 LHGLPGSGKTLLVNDFAREL 314
                 66889********9988877 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.77
        MobB   3 givgksgsGKTtLleklipel 23 
                  ++g  g GKTt +++l   l
  KHJ30857.1 631 LLIGETGIGKTTVVQQLADSL 651
                 58999***********98877 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 1.9
        MobB    4 ivgksgsGKTtLleklipelkarglrvgt 32  
                  i g   sGKT+++e l +   ++ +r++ 
  KHJ30857.1 1082 IQGPTSSGKTSMIEYLARYSGNKCVRINN 1110
                  678899**********9998888888875 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.21
        MobB    3 givgksgsGKTtLleklipelkarglrvg 31  
                   +vg  g+GKTt  + l + ++++ ++v+
  KHJ30857.1 1374 LLVGETGCGKTTVCQMLAESFAKKLFTVN 1402
                  589**************999999887776 PP

  == domain 5  score: 5.5 bits;  conditional E-value: 0.068
        MobB    4 ivgksgsGKTtLleklipelkarglrvgtiKh 35  
                  + g+ g GKTtL++ l ++ +++  r+++  h
  KHJ30857.1 1757 LEGNPGVGKTTLITALARVCNQSLTRINLSEH 1788
                  568899*************9999999987666 PP

  == domain 6  score: 5.2 bits;  conditional E-value: 0.088
        MobB    4 ivgksgsGKTtLleklipelka 25  
                  +vg sgsGKT+Ll+++ +++ +
  KHJ30857.1 2067 LVGLSGSGKTALLNHIAAIIGK 2088
                  79***********998776655 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0      0.12        25       4      39 ..     293     328 ..     292     334 .. 0.85
   2 ?   -1.1   0.0       4.9   1.1e+03       4      26 ..     630     652 ..     630     667 .. 0.79
   3 ?    0.7   0.0       1.3   2.9e+02       4      80 ..    1080    1154 ..    1079    1156 .. 0.65
   4 ?    2.2   0.0      0.46        98       4      40 ..    1373    1409 ..    1372    1444 .. 0.84
   5 ?    2.5   0.0      0.39        84       4      80 ..    1755    1832 ..    1754    1834 .. 0.69

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.12
                 EEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THH CS
       KTI12   4 vvltGlPssGKstrakeLakaleeekrsvvviddes 39 
                 ++l GlP sGK+ +++ +a++l      v+++ +e+
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELGLASTMVTLHLNEQ 328
                 799****************99988888887776665 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 4.9
                 EEEE--TTSSHHHHHHHHHHHHH CS
       KTI12   4 vvltGlPssGKstrakeLakale 26 
                 ++l G    GK+t++++La+ l 
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLG 652
                 678899999**********9885 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 1.3
                  EEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH.TTSSS--GGGHHHHHHHHHHHHHHHHTT.SEEEE-S-- CS
       KTI12    4 vvltGlPssGKstrakeLakaleeekrsvvviddeslgiekdsykdsakekalRsslrsavkrdLskekvVIvDsln 80  
                  v++ G  ssGK+++ + La++  ++  ++  ++   l+    sy ++++     + +     ++L + +++I+D+ln
  KHJ30857.1 1080 VLIQGPTSSGKTSMIEYLARYSGNKCVRINNHEHTDLQEYLGSYVSTSDGNL--TFQEGLLIQALRRGHWIILDELN 1154
                  7899999**********99997665555555555555433444544333322..22334456788888888888888 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.46
                  EEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHH CS
       KTI12    4 vvltGlPssGKstrakeLakaleeekrsvvviddesl 40  
                  v+l G    GK+t+ + La+ ++++  +v  +++   
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFAKKLFTVNAHQNTET 1409
                  78999999****************9999988886655 PP

  == domain 5  score: 2.5 bits;  conditional E-value: 0.39
                  EEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH..TTSSS--GGGHHHHHHHHHHHHHHHHTT.SEEEE-S-- CS
       KTI12    4 vvltGlPssGKstrakeLakaleeekrsvvviddeslg.iekdsykdsakekalRsslrsavkrdLskekvVIvDsln 80  
                  ++l G P +GK+t+   La+  +++  ++ + +   l  +  +++  +++e    ++  +   ++++k ++V +D++n
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVCNQSLTRINLSEHSDLTdLFGSDVPVANAEICQFEWRDAPFLQAMQKGEWVLLDEMN 1832
                  7899***************99999777666665444333444555556666666666666666677777777777766 PP

>> DUF853  Bacterial protein of unknown function (DUF853)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.075        16      25      55 ..     631     661 ..     625     683 .. 0.80
   2 !   10.0   0.0    0.0011      0.23      20      80 ..    1369    1431 ..    1350    1445 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.075
      DUF853  25 liaGatGtGktvtLqvlaeslseaGvpvfla 55 
                 l+ G tG Gkt  +q+la+sl    v v l+
  KHJ30857.1 631 LLIGETGIGKTTVVQQLADSLGYKLVVVNLS 661
                 6789*****************9988888665 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.0011
      DUF853   20 anrhGliaGatGtGktvtLqvlaeslseaGvpvfl..advkGdLsgiakaGevkdklaarlee 80  
                   n   l+ G tG Gkt   q+laes+++   +v +      GdL g  ++ + + ++a+ l +
  KHJ30857.1 1369 NNEPVLLVGETGCGKTTVCQMLAESFAKKLFTVNAhqNTETGDLIGAQRPVRNRAEVAEILMQ 1431
                  45567899*******************986666541155679999988887777777766555 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0      0.13        29       7      27 ..     630     650 ..     627     668 .. 0.84
   2 ?    3.3   0.0      0.19        40       7      31 ..    1373    1397 ..    1370    1426 .. 0.74
   3 ?    1.7   0.0       0.6   1.3e+02       7      26 ..    1755    1774 ..    1751    1794 .. 0.76
   4 ?    1.5   0.0      0.69   1.5e+02       7      24 ..    2065    2082 ..    2060    2103 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.13
                 EEEEEBTTSSCCCCCCTTSSS CS
      Septin   7 lmvvGesglGkttlintlfet 27 
                 ++++Ge g+Gktt+++ l  +
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADS 650
                 799************999765 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.19
                  EEEEEBTTSSCCCCCCTTSSSS--- CS
      Septin    7 lmvvGesglGkttlintlfetdlie 31  
                  +++vGe g Gktt+ + l e+  ++
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFAKK 1397
                  799**********999886654433 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.6
                  EEEEEBTTSSCCCCCCTTSS CS
      Septin    7 lmvvGesglGkttlintlfe 26  
                  +++ G+ g+Gkttli +l +
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALAR 1774
                  6888***********99854 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.69
                  EEEEEBTTSSCCCCCCTT CS
      Septin    7 lmvvGesglGkttlintl 24  
                   ++vG sg Gkt+l+n +
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHI 2082
                  689************976 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.54   1.2e+02       5      27 ..     634     656 ..     630     659 .. 0.88
   2 ?    3.3   0.0      0.28        59       3      27 ..    1082    1106 ..    1080    1110 .. 0.88
   3 ?    5.6   0.0     0.055        12       5     103 ..    1377    1484 ..    1373    1493 .. 0.60

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.54
                     -STTSSHHHHHHHHHHHHT-EEE CS
  Cytidylate_kin   5 GPagsGKssvaralaeklglkyl 27 
                     G +g GK +v ++la+ lg+k++
      KHJ30857.1 634 GETGIGKTTVVQQLADSLGYKLV 656
                     77899**************9975 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.28
                      EE-STTSSHHHHHHHHHHHHT-EEE CS
  Cytidylate_kin    3 iDGPagsGKssvaralaeklglkyl 27  
                      i GP++sGK s+   la+  g k++
      KHJ30857.1 1082 IQGPTSSGKTSMIEYLARYSGNKCV 1106
                      89***************99888876 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.055
                      -STTSSHHHHHHHHHHHHT-EEEEHHHHHHHHHHHHHHTT--TT-HHHHHHHHHT--EEEEEE.......EEEETTEE-T.TGGGSHHHHHHH CS
  Cytidylate_kin    5 GPagsGKssvaralaeklglkyldtgalYRalalaalrrkvdlldeaalvelakevelsfeae.......kvllngedve.eelrsdevekav 89  
                      G +g GK +v+++lae +  k++   a   + +   + ++ ++ + a+++e++ ++ l+  +        k+ +n    + ++lr +ev+k+ 
      KHJ30857.1 1377 GETGCGKTTVCQMLAESFAKKLFTVNAHQNTETGDLIGAQRPVRNRAEVAEILMQALLKALSLcdkditdKYDINILLKSyQSLREEEVSKIP 1469
                      7789**************999988777777766666666666666666666665554443333332233222222221111346677777777 PP

                      HHHTT.SHHHHHHHH CS
  Cytidylate_kin   90 Savaa.ipavRailv 103 
                      S++ + i++ Ra+++
      KHJ30857.1 1470 SEIHKtINSNRAKMN 1484
                      766541455566665 PP

>> SKI  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.086        19       2      21 ..     637     656 ..     636     663 .. 0.92
   2 ?    7.6   0.1     0.018       3.8       2      25 ..    1380    1403 ..    1379    1415 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.086
                 TSSHHHHHHHHHHHHTSEEE CS
         SKI   2 GaGKstvGkllAkklglefi 21 
                 G GK+tv ++lA++lg++++
  KHJ30857.1 637 GIGKTTVVQQLADSLGYKLV 656
                 89***************976 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.018
                  TSSHHHHHHHHHHHHTSEEEEHHH CS
         SKI    2 GaGKstvGkllAkklglefiDlDe 25  
                  G+GK+tv ++lA++   +++ +  
  KHJ30857.1 1380 GCGKTTVCQMLAESFAKKLFTVNA 1403
                  9************99888887765 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.024       5.2       4      26 ..     293     323 ..     290     344 .. 0.72
   2 ?    2.1   0.0      0.42        91       4      25 ..    1755    1776 ..    1752    1795 .. 0.78
   3 ?    3.7   0.0      0.13        29       4      48 ..    2065    2129 ..    2064    2189 .. 0.56

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.024
     DUF2075   4 vlVtGvaGtGKtvvllnllael........e 26 
                 +l +G +G+GKt++ + ++ el         
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELglastmvtL 323
                 6889**************9999555444441 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.42
     DUF2075    4 vlVtGvaGtGKtvvllnllael 25  
                  +l +G++G GKt +  +l+  +
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARVC 1776
                  789**********999988777 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.13
     DUF2075    4 vlVtGvaGtGKtvvllnllael....................edde..eertavylsvNhplvlvlr 48  
                  +l  G +G+GKt +l++++a +                           + +++++s  ++l   + 
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHIAAIIgkklvnlslnsdtdtmdligG--YeqADPRRTFASLCEELETLMN 2129
                  566799*************999777777666544444444441..0333333333333333333333 PP

>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0      0.12        26      17      49 ..     630     660 ..     622    1016 .. 0.92
   2 ?   -1.9   0.0       9.8   2.1e+03      18      44 ..    1081    1105 ..    1076    1135 .. 0.88
   3 ?    5.5   0.0     0.055        12      17      41 ..    1373    1397 ..    1364    1500 .. 0.88
   4 ?   -0.9   0.0       4.9   1.1e+03      18      41 ..    1756    1779 ..    1752    1789 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.12
                  EEEEESTTSSHHHHHHHHHHHSSTSSEEEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  17 tlipgafgvGktvisqslskqsnsddaiiyvgi 49 
                  +l++g+ g+Gkt+++q+l+     +   ++v  
   KHJ30857.1 630 ILLIGETGIGKTTVVQQLADSLGYK--LVVVNL 660
                  789****************997555..444444 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 9.8
                   EEEESTTSSHHHHHHHHHHHSSTSSEE CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab   18 lipgafgvGktvisqslskqsnsddai 44  
                   li g    Gkt +++ l+++s ++  +
   KHJ30857.1 1081 LIQGPTSSGKTSMIEYLARYSGNK--C 1105
                   79999***************8665..4 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.055
                   EEEEESTTSSHHHHHHHHHHHSSTS CS
                   xxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab   17 tlipgafgvGktvisqslskqsnsd 41  
                   +l++g+ g+Gkt+++q+l++   ++
   KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAESFAKK 1397
                   6789**************9986555 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 4.9
                   EEEESTTSSHHHHHHHHHHHSSTS CS
                   xxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab   18 lipgafgvGktvisqslskqsnsd 41  
                   l+ g+ gvGkt+++ +l++ +n++
   KHJ30857.1 1756 LLEGNPGVGKTTLITALARVCNQS 1779
                   567999********9999988765 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       4.5   9.8e+02       3      21 ..     293     311 ..     292     314 .. 0.87
   2 ?    0.7   0.0       1.6   3.4e+02       3      23 ..     630     650 ..     628     661 .. 0.87
   3 ?    1.3   0.0      0.99   2.1e+02       3      22 ..    1373    1392 ..    1371    1396 .. 0.87
   4 ?    7.0   0.0     0.018       3.9       3      23 ..    1755    1775 ..    1753    1780 .. 0.86
   5 ?    0.7   0.1       1.6   3.4e+02       3      21 ..    2065    2083 ..    2063    2091 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 4.5
                 EEEEESTTSSHHHHHHHHH CS
      FeoB_N   3 valvGnpnvGkttlfnalt 21 
                 + l G p +Gkt l+n  +
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFA 311
                 6789************865 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 1.6
                 EEEEESTTSSHHHHHHHHHTT CS
      FeoB_N   3 valvGnpnvGkttlfnaltga 23 
                 + l+G+  +Gktt++ +l+++
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLADS 650
                 789**************9865 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.99
                  EEEEESTTSSHHHHHHHHHT CS
      FeoB_N    3 valvGnpnvGkttlfnaltg 22  
                  v lvG+  +Gktt+   l++
  KHJ30857.1 1373 VLLVGETGCGKTTVCQMLAE 1392
                  789***********998876 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.018
                  EEEEESTTSSHHHHHHHHHTT CS
      FeoB_N    3 valvGnpnvGkttlfnaltga 23  
                  + l Gnp vGkttl+ al+ +
  KHJ30857.1 1755 ILLEGNPGVGKTTLITALARV 1775
                  6789************99865 PP

  == domain 5  score: 0.7 bits;  conditional E-value: 1.6
                  EEEEESTTSSHHHHHHHHH CS
      FeoB_N    3 valvGnpnvGkttlfnalt 21  
                  + lvG   +Gkt+l+n+++
  KHJ30857.1 2065 CLLVGLSGSGKTALLNHIA 2083
                  5799************997 PP

>> TrwB_AAD_bind  Type IV secretion-system coupling protein DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0      0.11        24      18      38 ..     630     650 ..     626     659 .. 0.89
   2 ?    1.6   0.0      0.46     1e+02      17      36 ..    1372    1391 ..    1364    1398 .. 0.82
   3 ?    0.9   0.0      0.78   1.7e+02      16      40 ..    1753    1777 ..    1745    1788 .. 0.84
   4 ?   -1.3   0.0       3.7   7.9e+02      18      37 ..    2065    2084 ..    2060    2089 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.11
  TrwB_AAD_bind  18 ilivGttGsGKtqalekllra 38 
                    il++G tG GKt+++++l ++
     KHJ30857.1 630 ILLIGETGIGKTTVVQQLADS 650
                    89**************99765 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.46
  TrwB_AAD_bind   17 hilivGttGsGKtqalekll 36  
                      +l+vG tG GKt++ + l 
     KHJ30857.1 1372 PVLLVGETGCGKTTVCQMLA 1391
                     589***********998775 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.78
  TrwB_AAD_bind   16 qhilivGttGsGKtqalekllrair 40  
                     + il+ G  G GKt+ +++l r  +
     KHJ30857.1 1753 KPILLEGNPGVGKTTLITALARVCN 1777
                     5689*************99977665 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 3.7
  TrwB_AAD_bind   18 ilivGttGsGKtqalekllr 37  
                      l+vG  GsGKt  l+++ +
     KHJ30857.1 2065 CLLVGLSGSGKTALLNHIAA 2084
                     5899*********9998755 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.99   2.1e+02      32      54 ..     293     315 ..     275     323 .. 0.82
   2 ?    3.7   0.0      0.12        26      14      65 ..     612     660 ..     602     674 .. 0.80
   3 ?   -2.3   0.0         8   1.7e+03      30      56 ..    1371    1397 ..    1353    1402 .. 0.79
   4 ?    3.8   0.0      0.11        24      33      52 ..    1756    1775 ..    1740    1785 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.99
                 EEEEE-TTSSHHHHHHHHHHHHH CS
        MeaB  32 vGltGvPGaGkstlvealglelr 54 
                 + l G+PG+Gk  lv+ ++ el 
  KHJ30857.1 293 ILLHGLPGSGKTLLVNDFARELG 315
                 5688*************999885 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.12
                 HHHHHHHHHGGG-S-SEEEEEEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE CS
        MeaB  14 eakellerllakaGraqvvGltGvPGaGkstlvealglelrrrGkrvavlav 65 
                  ak+lle++ a    ++ + l G  G Gk t+v++l+ +l   G++  v+ +
  KHJ30857.1 612 FAKRLLEQIGAAIIYSEPILLIGETGIGKTTVVQQLADSL---GYKLVVVNL 660
                 588999999999999999*****************99887...666666554 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 8
                  EEEEEEE-TTSSHHHHHHHHHHHHHCT CS
        MeaB   30 qvvGltGvPGaGkstlvealglelrrr 56  
                  + v l G  G Gk t+ + l+++++++
  KHJ30857.1 1371 EPVLLVGETGCGKTTVCQMLAESFAKK 1397
                  556788999**********99998765 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.11
                  EEEE-TTSSHHHHHHHHHHH CS
        MeaB   33 GltGvPGaGkstlvealgle 52  
                   l G PG+Gk tl+ al+  
  KHJ30857.1 1756 LLEGNPGVGKTTLITALARV 1775
                  5789***********99765 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0      0.21        45      27      47 ..     631     651 ..     625     787 .. 0.86
   2 ?   -1.3   0.0       8.7   1.9e+03      87     171 ..    1213    1325 ..    1187    1354 .. 0.59
   3 ?    4.0   0.0      0.21        46      27      51 ..    1374    1397 ..    1366    1403 .. 0.86
   4 ?    1.0   0.0       1.8   3.9e+02      93     143 ..    2356    2411 ..    2326    2417 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.21
       DUF87  27 AilgsTGsGKSntvavLleel 47 
                 + +g+TG GK++ v  L ++l
  KHJ30857.1 631 LLIGETGIGKTTVVQQLADSL 651
                 679***********9998887 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 8.7
       DUF87   87 dkelkinpwsldpeelldlleeddkpaaavqrsvleealdqaka........keekeklssdepveklleelk....................keke 155 
                  ++ l+++++++  eel+++l+++ ++ a+     + ++++++ +        ++++  ++ ++++   + ++                     +e++
  KHJ30857.1 1213 NRFLELHFNDIPEEELETILKTRCQNVAPSDCGRIVKVYKELSKlrqsnrffEHKNSFATLRDLFRWAFRKYDtreqlaangymllaervrnpEERN 1309
                  5578888889999999999888333333334444445555555555555565555555666665555555555666666666555555444444444 PP

       DUF87  156 elrklknqaiarlldk 171 
                   ++++ ++ ++ ++d+
  KHJ30857.1 1310 AVQNIIEKVMKVKIDT 1325
                  4444444444444444 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.21
       DUF87   27 AilgsTGsGKSntvavLleellekk 51  
                  + +g+TG GK++    L e+ + kk
  KHJ30857.1 1374 LLVGETGCGKTTVCQMLAESFA-KK 1397
                  678**************99998.44 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 1.8
       DUF87   93 npwsldpeelldllee....ddkpaaavqrsvleealdqaka.keekeklssdepv 143 
                   ++ l+++++l+l+e+    +d+p ++++rs+++e+ ++ k+   ++e +s +  +
  KHJ30857.1 2356 SFNFLQINDFLNLVETyisiYDDPTNKKLRSLVAETANSFKRhSFQNELVSLNFRI 2411
                  57779999*****9999999999999************999875555555555555 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.97   2.1e+02      16      50 ..     292     327 ..     280     335 .. 0.82
   2 ?    0.6   0.0       1.5   3.3e+02      17      36 ..     630     649 ..     623     655 .. 0.90
   3 ?   -1.4   0.0       6.3   1.4e+03     113     161 ..    1311    1358 ..    1304    1370 .. 0.84
   4 ?    2.3   0.0      0.46     1e+02      14      37 ..    1370    1393 ..    1359    1409 .. 0.76
   5 ?    6.5   0.0     0.024       5.2      10      34 ..    2058    2082 ..    2051    2091 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.97
                 EEEEEESTTSSHHHHHHHHHHS.SCEECSSSSSEEE CS
         Arf  16 rilllGLDnaGKtTilkklkle.elvttvPTigfnv 50 
                  ill GL ++GKt +++ +  e  l++t+ T++ n 
  KHJ30857.1 292 PILLHGLPGSGKTLLVNDFARElGLASTMVTLHLNE 327
                 59999*************998734677888888775 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 1.5
                 EEEEESTTSSHHHHHHHHHH CS
         Arf  17 illlGLDnaGKtTilkklkl 36 
                 ill+G  + GKtT++++l +
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLAD 649
                 8999999*********9975 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 6.3
                  CTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTT CS
         Arf  113 lkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkg 161 
                  +++++  v+  K+D+ ++l ++ ++++++ ++l+ +++ ei+ + a+++
  KHJ30857.1 1311 VQNIIEKVMKVKIDTLGQLYNAAVSSEIKSYNLT-QNSQEIVWTQAIQR 1358
                  45555668899**********************9.88889999888876 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.46
                  EEEEEEEESTTSSHHHHHHHHHHS CS
         Arf   14 elrilllGLDnaGKtTilkklkle 37  
                  +  +ll+G  + GKtT+ ++l + 
  KHJ30857.1 1370 NEPVLLVGETGCGKTTVCQMLAES 1393
                  556899**************9865 PP

  == domain 5  score: 6.5 bits;  conditional E-value: 0.024
                  T.TTEEEEEEEESTTSSHHHHHHHH CS
         Arf   10 lkkkelrilllGLDnaGKtTilkkl 34  
                    ++++ +ll+GL ++GKt +l+++
  KHJ30857.1 2058 CIQQNIPCLLVGLSGSGKTALLNHI 2082
                  4588999***************986 PP

>> GAF_2  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0    0.0016      0.34      13      97 ..     309     392 ..     305     399 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0016
                 HHHHHSS....EEEEEEE-TTS-EEEEEEEES-TTSTT-S-B---TTHHHHHHHHTS-EEES-GGG-S-HHHHHHHHHTT--EEEEE CS
       GAF_2  13 delvelg..aalgyillvdddgglrlaawgeaeeefgaaldrplgeglvgealrtgrpvilndleedpdkkglpaghaglrsflavP 97 
                 d ++elg  ++++ ++l + +++ +++   +a+++  +++      g++ +a+++gr+++++d+++ p+   +       r++l++P
  KHJ30857.1 309 DFARELGlaSTMVTLHLNE-QTDAKVLIGVYATGSNPGSF--EWKPGVLTTAVKEGRWIFIEDIDRAPNDVISLILSLVERRELHIP 392
                 6688998745599999977.4445799999**********..6677*99****************9998877766666666666666 PP

>> IPT  Isopentenyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.061        13       5      33 ..     631     659 ..     628     675 .. 0.90
   2 ?    3.3   0.0      0.21        45       5      29 ..    1081    1105 ..    1079    1110 .. 0.86
   3 ?   -0.4   0.0       2.8   6.1e+02       5      25 ..    1374    1394 ..    1371    1422 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.061
         IPT   5 lifGatttGKtaeaiklaketgapvivlD 33 
                 l+ G t++GKt +  +la + g+ ++v+ 
  KHJ30857.1 631 LLIGETGIGKTTVVQQLADSLGYKLVVVN 659
                 789********************999876 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.21
         IPT    5 lifGatttGKtaeaiklaketgapv 29  
                  li G+t++GKt++   la+  g   
  KHJ30857.1 1081 LIQGPTSSGKTSMIEYLARYSGNKC 1105
                  899***********99999888665 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 2.8
         IPT    5 lifGatttGKtaeaiklaket 25  
                  l++G t+ GKt +   la++ 
  KHJ30857.1 1374 LLVGETGCGKTTVCQMLAESF 1394
                  899**********99999875 PP

>> DnaB_C  DnaB-like helicase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0       1.3   2.7e+02       8      45 ..     279     316 ..     273     335 .. 0.78
   2 ?    1.4   0.0      0.75   1.6e+02      15      72 ..    1366    1423 ..    1361    1485 .. 0.70
   3 ?    3.8   0.0      0.15        31      12      44 ..    1745    1777 ..    1737    1792 .. 0.83
   4 ?    0.1   0.0       1.9     4e+02       8      45 ..    2051    2088 ..    2045    2195 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 1.3
                 HHHHHCTSBXTTXEEEEEEXTTSSHHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C   8 dLDkltsGlqkgdliiiAarpsmGktalalniaenaav 45 
                 +++++ + l ++  i++ + p+ Gkt l+ ++a++   
  KHJ30857.1 279 NMENFAEALLSSSPILLHGLPGSGKTLLVNDFARELGL 316
                 567778888899999***************99988665 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.75
                  SBXTTXEEEEEEXTTSSHHHHHHHHHHHHHHCSTSEEEEEESSSXHHHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C   15 GlqkgdliiiAarpsmGktalalniaenaavkeklpvavfslemsaeqlvqRllssea 72  
                   +q+++ +++ +  ++Gkt+++  +ae+ a+k  +  a  + e  +   +qR + ++a
  KHJ30857.1 1366 AIQNNEPVLLVGETGCGKTTVCQMLAESFAKKLFTVNAHQNTETGDLIGAQRPVRNRA 1423
                  67888999999****************9997543333444444444444555555555 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.15
                  HCTSBXTTXEEEEEEXTTSSHHHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C   12 ltsGlqkgdliiiAarpsmGktalalniaenaa 44  
                  +++ lq  + i++ + p++Gkt+l + +a+ + 
  KHJ30857.1 1745 IVRALQVRKPILLEGNPGVGKTTLITALARVCN 1777
                  567788888999***************998765 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 1.9
                  HHHHHCTSBXTTXEEEEEEXTTSSHHHHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C    8 dLDkltsGlqkgdliiiAarpsmGktalalniaenaav 45  
                  +L++++  +q++  +++ + ++ Gktal  +ia+ + +
  KHJ30857.1 2051 ELESVMICIQQNIPCLLVGLSGSGKTALLNHIAAIIGK 2088
                  67888888888888999999*********999987664 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0      0.13        29     114     189 ..    1077    1151 ..    1048    1166 .. 0.86
   2 ?    4.1   0.1     0.095        20      98     138 ..    1354    1394 ..    1286    1409 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.13
   Parvo_NS1  114 rntvwfyGpantGktnlaeaIakavplygcvnwtNenfpfndcfkklliwweeglmyvsvvelakailggtavrvd 189 
                  r  v++ Gp + Gkt + e +a+ + + +cv ++N      + +  + +   +g  + +++ l+ a+++g  +++d
  KHJ30857.1 1077 RYPVLIQGPTSSGKTSMIEYLARYSGN-KCVRINNHEHTDLQEYLGSYVSTSDGNLTFQEGLLIQALRRGHWIILD 1151
                  4457788****************9998.9***99999887777777778999999999999999999999999999 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.095
   Parvo_NS1   98 evgqvllawlskqlgkrntvwfyGpantGktnlaeaIakav 138 
                  ++ q l++ +s+ +++ + v+++G+  +Gkt + + +a+ +
  KHJ30857.1 1354 QAIQRLYILVSHAIQNNEPVLLVGETGCGKTTVCQMLAESF 1394
                  45577999***************************999976 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0      0.82   1.8e+02      28      82 ..    1374    1428 ..    1364    1516 .. 0.75
   2 ?    4.4   0.0       0.1        22      28      56 ..    2066    2093 ..    2053    2156 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.82
                  EEEESTTSSHHHHHHHHHHHCTT...TTTTTTCHCCCCCC--BTTCSSTTEEEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N   28 aivGpNGSGKsnlldAilFvLGer..sakklrseklsdlihkskekasvkkaeveit 82  
                   +vG+ G+GK+ +++ +   + ++  + ++ +++++ dli +  +++  ++aev+ +
  KHJ30857.1 1374 LLVGETGCGKTTVCQMLAESFAKKlfTVNAHQNTETGDLIGA--QRPVRNRAEVAEI 1428
                  689999****99998887666655334445566677778876..6667777777654 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.1
                  EEEESTTSSHHHHHHHHHHHCTT.TTTTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N   28 aivGpNGSGKsnlldAilFvLGersakkl 56  
                   +vG  GSGK+ ll+ i  ++G++   +l
  KHJ30857.1 2066 LLVGLSGSGKTALLNHIAAIIGKKLV-NL 2093
                  589**************999997643.33 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0      0.15        32      12      48 ..     637     670 ..     634     709 .. 0.84
   2 ?    4.2   0.1      0.17        36      12      50 ..    1380    1415 ..    1377    1484 .. 0.60
   3 ?    0.7   0.0         2   4.2e+02      12      27 ..    1762    1777 ..    1757    1786 .. 0.84
   4 ?    0.1   0.2       3.1   6.6e+02      54     120 ..    2115    2197 ..    2071    2199 .. 0.60

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.15
      AAA_31  12 GvGKTTtsvnlaaalaklgkkvLlvDlDpQanattgl 48 
                 G+GKTT + +la +l   g+k  +v+l  Q+     l
  KHJ30857.1 637 GIGKTTVVQQLADSL---GYKLVVVNLSQQSEVGDLL 670
                 9***********987...8999999999998776655 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.17
      AAA_31   12 GvGKTTtsvnlaaalaklgkkvLlvDlDpQanattglgi 50  
                  G GKTT + +la+++ak   k   v++   + +   +g 
  KHJ30857.1 1380 GCGKTTVCQMLAESFAK---KLFTVNAHQNTETGDLIGA 1415
                  99***********9985...6666666555555554444 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 2
      AAA_31   12 GvGKTTtsvnlaaala 27  
                  GvGKTT  ++la +  
  KHJ30857.1 1762 GVGKTTLITALARVCN 1777
                  9**********98765 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 3.1
      AAA_31   54 e............iektlyevlieeknikeaiiktkvenldlipssidLaeaeielvelekkeei.....lkellekvkdeYDy 120 
                  +            ++++l+++l +++  +ea + ++++n++ +p +  L+++ +++ ++ ++ +i     l + ++++++++D 
  KHJ30857.1 2115 RtfaslceeletlMNQKLLSTL-SSQLPQEAKYLEEMKNNERLPFQNMLSNLAQKVSQIGSQVNIqdfedLAQRFHTLSKNFDT 2197
                  1333333332233555666664.45556677777889999999*9999****99999999996666666688888889999885 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.1      0.29        64       2      20 ..     630     648 ..     629     652 .. 0.88
   2 ?    4.2   0.0      0.14        30       2      28 ..    1373    1398 ..    1372    1415 .. 0.73
   3 ?   -0.5   0.0       3.8   8.2e+02       3      18 ..    1756    1771 ..    1754    1776 .. 0.83
   4 ?   -0.8   0.1       4.6   9.9e+02       3      17 ..    2066    2080 ..    2065    2084 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.29
                 EEEEESTTSSHHHHHHHHH CS
         Ras   2 lvlvGdsavGKtslllrfv 20 
                 ++l+G++++GKt+++ + +
  KHJ30857.1 630 ILLIGETGIGKTTVVQQLA 648
                 689***********99876 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.14
                  EEEEESTTSSHHHHHHHHHHSSCSSSC CS
         Ras    2 lvlvGdsavGKtslllrfvkdkFkeey 28  
                  ++lvG++++GKt++  +   ++F ++ 
  KHJ30857.1 1373 VLLVGETGCGKTTVC-QMLAESFAKKL 1398
                  689*********965.55566676653 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 3.8
                  EEEESTTSSHHHHHHH CS
         Ras    3 vlvGdsavGKtslllr 18  
                  +l G+ +vGKt+l++ 
  KHJ30857.1 1756 LLEGNPGVGKTTLITA 1771
                  56699********986 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 4.6
                  EEEESTTSSHHHHHH CS
         Ras    3 vlvGdsavGKtslll 17  
                  +lvG s+ GKt+ll+
  KHJ30857.1 2066 LLVGLSGSGKTALLN 2080
                  79***********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       824  (0.0459591); expected 358.6 (0.02)
Passed bias filter:                      637  (0.035529); expected 358.6 (0.02)
Passed Vit filter:                       133  (0.00741815); expected 17.9 (0.001)
Passed Fwd filter:                        83  (0.00462937); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              83  [number of targets reported over threshold]
# CPU time: 1.64u 0.33s 00:00:01.97 Elapsed: 00:00:00.53
# Mc/sec: 13643.04
//
Query:       KHJ30858.1  [L=2421]
Description: putative huge dynein-related aaa-type atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.045   13.4   0.2      0.092   12.3   0.2    1.4  1  ODAM      Odontogenic ameloblast-associated family
       0.33   10.7   5.4        2.5    7.9   0.1    3.7  3  IL31      Interleukin 31


Domain annotation for each model (and alignments):
>> ODAM  Odontogenic ameloblast-associated family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2     1e-05     0.092      24      89 ..    1354    1417 ..    1349    1423 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1e-05
        ODAM   24 aqllPlqlqgpfnswippfsgilqqqqqaqipglsqislstldqlagllpnqipfpgqvsfaqgaq 89  
                  aq+    +q+ f+swi++f+++   +q  +ip  + + +st       + n+ + + +v++aq   
  KHJ30858.1 1354 AQVEANMVQNTFESWITKFTTLK--KQWDNIPHIPPMIISTERLNLEHFINNATNQLAVELAQIKS 1417
                  67788889************988..68999**************9*********999****99765 PP

>> IL31  Interleukin 31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.33   2.9e+03      55      94 ..     208     247 ..     190     251 .. 0.78
   2 ?    2.7   0.5     0.011     1e+02      12      98 ..    1180    1265 ..    1138    1276 .. 0.72
   3 ?    7.9   0.1   0.00028       2.5      41      97 ..    2043    2101 ..    2032    2108 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.33
        IL31  55 eapnninssailaylkaikplldnksdideiieqLkklkl 94 
                 e   n +   i +y+k+  + + + + ++e+++ L+++k+
  KHJ30858.1 208 EIHSNREKENITPYFKKQFETIRQYQFLSEMLSDLDEIKV 247
                 4455667788999999999999999999999999998876 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.011
        IL31   12 edlkkiikeLkslskklledyekkekGvsesesyqlpcltsdreapnninssailaylkaikplldnksdi..deiieqL...kklklqnep 98  
                  ++ k+i+k+Lks+ +k++ d  k  + +  +  y+l + ++ ++ +     s++l+ l++ k l++n+++i  ++ i+++   ++l+ q++p
  KHJ30858.1 1180 KETKGIVKNLKSQKRKVFADTLKSLRIMGIQ--YNLSSDILLKQRS----LSVVLTQLENWKDLTNNEAEIyfQRFINHIikaRNLSKQHSP 1265
                  5689999999999999999988765544443..4444444444443....378999999999999999987444555554111345555554 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.00028
        IL31   41 esesyqlpcltsdreapnninssailaylkaikplldn..ksdideiieqLkklklqne 97  
                  +++  q pc   ++e  n++ns  i  yl++ k+ ldn  ks++  +i+q ++l ++n+
  KHJ30858.1 2043 NDNPDQFPCDEAQNENMNQLNSMEIDEYLNSEKHDLDNslKSQVGAMIKQSRDLGSENK 2101
                  5677899*******************************56688999***9999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1402  (0.0781973); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.36u 0.30s 00:00:01.66 Elapsed: 00:00:00.54
# Mc/sec: 13542.83
//
Query:       KHJ30859.1  [L=665]
Description: putative com1 regulatory protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (665 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1839  (0.102571); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.32s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 4467.06
//
Query:       KHJ30860.1  [L=1052]
Description: hypothetical protein EV44_g2244 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-92  310.0   3.4    1.7e-92  310.0   3.4    2.7  3  NRDE-2    NRDE-2, necessary for RNA interference


Domain annotation for each model (and alignments):
>> NRDE-2  NRDE-2, necessary for RNA interference
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  310.0   3.4   9.2e-97   1.7e-92       1     321 [.     241     560 ..     241     561 .. 0.92
   2 ?   -3.8   0.1      0.31   5.5e+03     100     121 ..     740     761 ..     732     766 .. 0.84
   3 ?    0.9   0.0     0.011   1.9e+02      86     122 ..     951     988 ..     920    1016 .. 0.69

  Alignments for each domain:
  == domain 1  score: 310.0 bits;  conditional E-value: 9.2e-97
      NRDE-2   1 kknaelnraveenPedidaWlelvefQdellsaeee..slskserkalaeiklsilekAleknksnpdserLllelLklgseiwdseklakeWeellke 97 
                 +kna l  +ve++P+di+aWl l+++Qd l++++++  ++s++  k++a+ik++++ekAl+++ks +++erLl++l+++g+++w+ +  a++We + k+
  KHJ30860.1 241 RKNATLRMRVENSPTDIEAWLLLINHQDLLIEKSDDplRISQASIKSIADIKVHLYEKALQHCKSLENRERLLVGLMSEGEKLWELKIQANRWEHISKN 339
                 5899************************888766669*999********************************************************** PP

      NRDE-2  98 npnsvkLWreyldfrqsnfasfsvekvkelyekclrtlsaklegrkvshkaeeeteeellyvllrlcrflrqaGysErAvalwQAliElnlfrPsslsn 196
                 n +s+ LW++yl+f+q n+++f++e+vk+ly ++++ l++ +++  +    +e++++ell vllr++ f+r+aGysE+Ava+wQ+ +E+n++ P++  +
  KHJ30860.1 340 NIDSLFLWKKYLNFKQFNLSTFRYEEVKKLYLQRIEYLNETIKTDPK---YTEKNCKELLFVLLRATIFIREAGYSELAVAIWQSNLEINFCAPREEYK 435
                 *****************************************999776...55667*****************************************977 PP

      NRDE-2 197 qeeltlkeFeeFWesevpriGeegakGWakwvekeeeeedkpeskkepsekeesaedlfeaWleaErereskawlPartmdeeeeeDpervvlfsDiep 295
                  +e  ++ F+eFWesevpriGe gakGW+ + e+ ++ +  +  +++++ +  ++++ f++W+ aEr r++++++Pa+t+de+ ++Dp+rv+lf Di++
  KHJ30860.1 436 YDEC-INIFREFWESEVPRIGEIGAKGWRYYEENPDAISAINI-SEDKDGDLLEKSNIFKSWAFAERLRSRSSKIPAKTLDEVVDDDPFRVILFTDIQD 532
                 6666.899********************998866544444333.5566666777779****************************************** PP

      NRDE-2 296 lLfklpsk..elkeqLidafLeflglpp 321
                 ++++lpsk  ++ + +idafL+f+ l p
  KHJ30860.1 533 FICFLPSKseKTYRFFIDAFLSFCSLSP 560
                 *******975577889********9986 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 0.31
      NRDE-2 100 nsvkLWreyldfrqsnfasfsv 121
                 + + LW+ ++  ++++  +f+ 
  KHJ30860.1 740 KIILLWKSWIWTCLEDRDNFKA 761
                 5678*********999999975 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.011
      NRDE-2  86 klakeWeellkenp..nsvkLWreyldfrqsnfasfsve 122
                  +++ +e+ +++    ns +LW+ y+ ++++ + +f+ +
  KHJ30860.1 951 STKAAFEDSVSSPImrNSPGLWQLYILYCLR-IPQFQCD 988
                 5556666666644334899**********99.8888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1052 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1267  (0.0706676); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.78u 0.27s 00:00:01.05 Elapsed: 00:00:00.44
# Mc/sec: 7239.28
//
Query:       KHJ30861.1  [L=1796]
Description: putative u3 small nucleolar rna-associated protein 10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-35  120.3   4.7    6.4e-35  120.3   4.7    2.8  3  BP28CT      BP28CT (NUC211) domain
      8e-22   77.8  14.5    1.3e-21   77.1   2.3    5.1  5  U3snoRNP10  U3 small nucleolar RNA-associated protein 10
    9.3e-08   31.7   0.7       0.33   11.3   0.0    5.2  3  HEAT        HEAT repeat
    1.3e-05   25.5   1.9        2.2    8.7   0.1    5.3  5  HEAT_2      HEAT repeats
  ------ inclusion threshold ------
       0.34   10.9   3.5        6.3    6.8   0.1    4.0  4  UME         UME (NUC010) domain


Domain annotation for each model (and alignments):
>> BP28CT  BP28CT (NUC211) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.62   2.2e+03      29      60 ..    1004    1035 ..     938    1039 .. 0.72
   2 ?   -2.0   0.1      0.79   2.8e+03     130     156 ..    1272    1298 ..    1226    1299 .. 0.62
   3 !  120.3   4.7   1.8e-38   6.4e-35       3     158 .]    1518    1666 ..    1517    1666 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.62
                  HHHHHHHHHHHHHHHHHHHHH-----HHHHHH CS
      BP28CT   29 eeeidevEesvieafvalvlKLneatFrPlFl 60  
                  + +++++   +i+++ ++v KL   +F P+F+
  KHJ30861.1 1004 SPQVQNLALLIISSLASIVPKLILHSFMPIFT 1035
                  35566777778999999999999999999986 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.79
                  .........HHHHHHHHHHHHHHHHGG CS
      BP28CT  130 kkkeekkveLlrlvlstLtkcflhDqd 156 
                  +   + +  L+r +ls+L+  +++D++
  KHJ30861.1 1272 TLLGRPDKSLRRKILSSLQIRIENDKS 1298
                  222566678999999999999999975 PP

  == domain 3  score: 120.3 bits;  conditional E-value: 1.8e-38
                  HHHHHHHHHHHHHHHHHHHHHT----....HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHH...HHTSTT-----HHHHHHHHHHHHH-- CS
      BP28CT    3 sknlkelfkfflkaldlRreqaskke....eeeidevEesvieafvalvlKLneatFrPlFlklveWaeeesselskkdskeRlitfykllnklaek 95  
                  +kn+  ++k++ +aldl+r+ +  ++    ++ ide E+ ++ +++++v+KLn a+F+PlF++lv+Wa+ + ++++   ++ R++++y++++ ++++
  KHJ30861.1 1518 NKNSVIFAKIVQNALDLKRRLNLVNDdrftKNVIDEFENILNYVILEIVYKLNNASFKPLFIDLVDWATVRLEKEDRVGRSLRQQSLYSFTALFFDS 1614
                  57888999**********999988878999999***********************************8766667777777**************** PP

                  ------TTHHHHHHHHHHHHH---------HH...........HHHHHHHHHHHHHHHHGGGG CS
      BP28CT   96 LkslftsYasyllenavelLkalnekseeskekkkkkeekkveLlrlvlstLtkcflhDqdeF 158 
                  Lks++tsYasyl+e++ve+L++++ ++e ske           L+ +vl+tL kcf+hDqd+F
  KHJ30861.1 1615 LKSIVTSYASYLIESSVEVLTSIDLNDEISKE-----------LWIRVLRTLIKCFEHDQDDF 1666
                  ********************999877777777...........*******************9 PP

>> U3snoRNP10  U3 small nucleolar RNA-associated protein 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.1   2.3   3.7e-25   1.3e-21       2     112 ..     247     357 ..     246     361 .. 0.96
   2 ?    3.5   0.0     0.025        91      32      96 ..     860     955 ..     856     966 .. 0.62
   3 ?   -3.2   0.1       2.9     1e+04      12      37 ..     998    1023 ..     994    1023 .. 0.77
   4 ?    2.3   0.0     0.059   2.1e+02       4      37 ..    1398    1432 ..    1395    1445 .. 0.82
   5 ?   -2.4   0.1       1.6   5.9e+03      48      98 ..    1718    1763 ..    1686    1769 .. 0.52

  Alignments for each domain:
  == domain 1  score: 77.1 bits;  conditional E-value: 3.7e-25
                 HHHHHHHHHHHHT-TT-HHHHHHHHHHHHHHHHTT-S-HHHHHHHHHHHHHH--GGGHHHHHHHHHHHHHT-SS-S--HHHHHHHTTSTTHHHHHHHHT CS
  U3snoRNP10   2 ltallpvllegLlssssadlqaaaymilsvLaskvpLsdkvleallesilknlskelaksallcllvlaqsqsakllpkkvlkallklpsladvLeels 100
                 l ++lp+l +gL+++ ++ l+++++milsv++sk  ++dk+l+al+e+++ ++++++a s+++cl+ l++++ +k+lpkk++k+l   +++ d+L ++s
  KHJ30861.1 247 LLKILPTLKQGLSMKEVSSLRVGCFMILSVIVSKGDFDDKILSALMEAVVFGWTNDTAISSMICLSLLLEHRGSKKLPKKLMKQLIIDQNFLDTLIKIS 345
                 6789**********9999******************************************************9999***********999********* PP

                 TTS--HHHHHHH CS
  U3snoRNP10 101 keyrvdkfllal 112
                 k+ rvd++++++
  KHJ30861.1 346 KQQRVDRLANVI 357
                 ******998875 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.025
                 HHHTT-S-HHHHHHHHHHHHHH...--..GGGHHHH.......................HHHHHHHHHT-S...S-S--HHHHHHHTTSTTHHHHH CS
  U3snoRNP10  32 LaskvpLsdkvleallesilkn...ls..kelaksa.......................llcllvlaqsqs...akllpkkvlkallklpsladvL 96 
                 L +kvpLs++vl ++l+++      l+  +++++                         l+++l+l+++     + +l k +++ l +l+++ +vL
  KHJ30861.1 860 LLHKVPLSSEVLASFLNKVFIPgnsLEisPATKRRRtengkivtgqvqdpvliksiirrLIFVLQLVDDSDlakNPDLLKPLFNILAQLQDFKSVL 955
                 789**************9986522222333333333566666666666666666666666666666644433323336666666666666655555 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 2.9
                  HHT-TT-HHHHHHHHHHHHHHHHTT- CS
  U3snoRNP10   12 gLlssssadlqaaaymilsvLaskvp 37  
                  + + +ss+ +q  a+ i+s Las+vp
  KHJ30861.1  998 CVQKTSSPQVQNLALLIISSLASIVP 1023
                  55556678888889999**9999987 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.059
                  HHHHHHHHHHT-.TT-HHHHHHHHHHHHHHHHTT- CS
  U3snoRNP10    4 allpvllegLls.sssadlqaaaymilsvLaskvp 37  
                  + l +l + +++  +++ l+ a+ym ls L+ ++p
  KHJ30861.1 1398 RALEYLKKSMENkDKDEMLHNACYMFLSALVGHLP 1432
                  668888899998666777999*********98766 PP

  == domain 5  score: -2.4 bits;  conditional E-value: 1.6
                  HHHHHH--GGGHHHHHHHHHHHHHT-SS-S--HHHHHHHTTSTTHHHHHHH CS
  U3snoRNP10   48 esilknlskelaksallcllvlaqsqsakllpkkvlkallklpsladvLee 98  
                   s+lk++++e  + ++ + +v ++++ ++ l ++ l  l +   +  v++e
  KHJ30861.1 1718 ISMLKHMRSE--NASVRLAAVTCEQKLTERLGEEWLSMLPE---MLPVISE 1763
                  3444443322..22355555555544333344444444444...4455555 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   9.1e-05      0.33       1      29 [.     586     614 ..     586     616 .. 0.91
   2 !    6.3   0.0    0.0039        14       8      30 ..    1361    1383 ..    1360    1384 .. 0.90
   3 !    7.9   0.0    0.0011       4.1       5      28 ..    1720    1743 ..    1717    1746 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 9.1e-05
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 llP  + +lsD s++VR+ Aa+ L ++ +
  KHJ30861.1 586 LLPYAIVALSDASAKVRRGAAELLNTIGK 614
                 79998999*****************9987 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0039
                  HHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT    8 llsDpspeVReaAakaLgalaev 30  
                  +l +++ + R++A+++L+ ++ +
  KHJ30861.1 1361 CLGHSDNQLRMMAFQCLASIVDI 1383
                  57899***************976 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.0011
                  HHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT    5 llkllsDpspeVReaAakaLgala 28  
                  +lk +++++++VR aA+ +  +l 
  KHJ30861.1 1720 MLKHMRSENASVRLAAVTCEQKLT 1743
                  578899***********9966665 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.1   0.00063       2.2      23      59 ..     574     613 ..     559     624 .. 0.77
   2 ?   -3.2   0.0       3.4   1.2e+04       2      25 ..     993    1016 ..     992    1024 .. 0.68
   3 ?    0.8   0.0      0.18   6.6e+02      27      55 ..    1261    1289 ..    1246    1307 .. 0.58
   4 ?    3.3   0.0      0.03   1.1e+02      31      78 ..    1351    1414 ..    1311    1421 .. 0.59
   5 !    6.6   0.1    0.0028        10      37      82 ..    1721    1775 ..    1695    1779 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00063
      HEAT_2  23 aLg...rignpealpaLvellededpavRraaaeaLgaig 59 
                   g    i+ + +lp+ + +l+d+++ vRr aae L  ig
  KHJ30861.1 574 LAGqknGIDFQALLPYAIVALSDASAKVRRGAAELLNTIG 613
                 33455456678999********************998887 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 3.4
      HEAT_2    2 daLlqalendpdpevrraairaLg 25  
                  d+L+  +++ ++p+v+  a+  + 
  KHJ30861.1  993 DLLVDCVQKTSSPQVQNLALLIIS 1016
                  567777777777777777776665 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.18
      HEAT_2   27 ignpealpaLvellededpavRraaaeaL 55  
                  + ++e l+ +  ll  +d   Rr +  +L
  KHJ30861.1 1261 LSTQEFLKSVQTLLGRPDKSLRRKILSSL 1289
                  34444444444444444444444444433 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.03
      HEAT_2   31 ealpaLve..llededpavRraaaeaLgai..........gd....pealpaLkellddddddv 78  
                   a +++ +  +l ++d   R++a + L+ i          ++    p+al+ Lk+++ ++d+d+
  KHJ30861.1 1351 GAAETISSsyCLGHSDNQLRMMAFQCLASIvdilkeefifALpmtiPRALEYLKKSMENKDKDE 1414
                  3455555532348899999999999999765555443344213447999999999999988765 PP

  == domain 5  score: 6.6 bits;  conditional E-value: 0.0028
      HEAT_2   37 vellededpavRraaaeaLgai....g......dpealpaLkellddddddvvRea 82  
                  ++ +++e++ vR aa++   ++    g      +pe lp+  e l++ddd+vv ++
  KHJ30861.1 1721 LKHMRSENASVRLAAVTCEQKLterlGeewlsmLPEMLPVISE-LQEDDDEVVERE 1775
                  677899**********977766333335555446*********.667888888765 PP

>> UME  UME (NUC010) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.06   2.1e+02      49      87 ..     245     283 ..     230     297 .. 0.84
   2 ?   -2.9   0.0       1.7   6.3e+03      11      46 ..     792     827 ..     788     842 .. 0.63
   3 ?    6.8   0.1    0.0017       6.3       5      86 ..    1306    1388 ..    1304    1396 .. 0.80
   4 ?   -3.5   0.1       2.8     1e+04      56      87 ..    1720    1751 ..    1684    1757 .. 0.56

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.06
         UME  49 salpqimacLqsaleidelrsaalsvWatllsnlededl 87 
                  al +i+ +L+++l+ +e+ s  + ++ +l  ++++ d+
  KHJ30861.1 245 EALLKILPTLKQGLSMKEVSSLRVGCFMILSVIVSKGDF 283
                 57889**********************999998876665 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.7
         UME  11 trlseklndshgkkslaekkraikaleeliklagss 46 
                 + l++ ++d + +k ++    + k +e l k ++ +
  KHJ30861.1 792 QFLQDIIQDYRIQKRPSLEVAIYKRMETLWKSLRRE 827
                 566777777777766666666666666666655544 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0017
         UME    5 hilgiltrlseklndshgkkslaekkraikaleel.iklagss...issalpqimacLqsaleidelrsaalsvWatllsnleded 86  
                   ilg+l +l   +++s+     ++k  ai++ +++ ik+ ++    ++ a+  i++    + ++++lr  a+++ a+ + +l++e 
  KHJ30861.1 1306 AILGFLPQLRVIIQESSDM---QNKYVAINCVKKIsIKYGRKDleaMKGAAETISSSYCLGHSDNQLRMMAFQCLASIVDILKEEF 1388
                  6899999999999777666...555555555555427777776899999999******************************9875 PP

  == domain 4  score: -3.5 bits;  conditional E-value: 2.8
         UME   56 acLqsaleidelrsaalsvWatllsnlededl 87  
                   + +   e++ +r aa+++ + l + l +e l
  KHJ30861.1 1720 MLKHMRSENASVRLAAVTCEQKLTERLGEEWL 1751
                  22222233356666666666666666665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1796 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.91u 0.29s 00:00:01.20 Elapsed: 00:00:00.44
# Mc/sec: 12365.84
//
Query:       KHJ30862.1  [L=424]
Description: hypothetical protein EV44_g5460 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.12   12.3   0.0        0.3   11.1   0.0    1.7  1  Tautomerase  Tautomerase enzyme
       0.12   13.1   0.2        1.5    9.6   0.0    2.3  2  PIN_3        PIN domain


Domain annotation for each model (and alignments):
>> Tautomerase  Tautomerase enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   3.3e-05       0.3      12      38 ..     297     323 ..     289     328 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.3e-05
                  -HHHHHHHHHHHHHHHHHHHTS-GGG- CS
  Tautomerase  12 saeqKaeLaervTealvealgaprsai 38 
                   aeq + L +++T++ ve+++ap++ i
   KHJ30862.1 297 HAEQNKFLLKEITNLCVEHIKAPKAEI 323
                  589999*****************9987 PP

>> PIN_3  PIN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.092   8.2e+02      15      54 ..     189     228 ..     183     270 .. 0.69
   2 ?    9.6   0.0   0.00017       1.5      30      76 ..     321     370 ..     309     404 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.092
       PIN_3  15 fdspaarkildaletgaitlvvsprlldElervlarelay 54 
                 ++s+ ar+ +++le++++ +    r+l+ + +++   la 
  KHJ30862.1 189 SRSQQARFQRKLLESKRYMISPEDRILEKFINNILATLAT 228
                 346689999*******999999999999999998544433 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00017
       PIN_3  30 gaitlvvsprlldElervlarelaypqfklraadkaallakva.ler..k 76 
                  +i+ ++s+++   +e++l rel+ +++k + a+ ++l+  +  +e   k
  KHJ30862.1 321 AEIEGLISATITQRYEEILRRELDIHKQKYSIAKIKQLRNSFKeSEMivK 370
                 57999****************************99998887765444552 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1302  (0.0726198); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3134.34
//
Query:       KHJ30863.1  [L=367]
Description: putative bacilysin biosynthesis oxidoreductase bacc [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-28   98.3   0.0    5.5e-27   94.5   0.0    2.1  1  adh_short     short chain dehydrogenase
      1e-22   80.8   0.0    6.8e-21   74.9   0.0    2.3  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
    0.00019   21.4   0.0    0.00035   20.5   0.0    1.4  1  KR            KR domain
  ------ inclusion threshold ------
      0.069   11.8   0.3      0.096   11.4   0.3    1.2  1  HI0933_like   HI0933-like protein
       0.09   12.2   0.0       0.25   10.7   0.0    1.8  2  Epimerase     NAD dependent epimerase/dehydratase family


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.5   0.0   1.5e-30   5.5e-27       1     187 [.      36     250 ..      36     255 .. 0.88

  Alignments for each domain:
  == domain 1  score: 94.5 bits;  conditional E-value: 1.5e-30
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHH..SSESEEEE---S....S--SSG CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegakalaiqvDvtdreevealvekavkkl..gkldvLvnNAGi....tgsgpf 93 
                 k++++tG++sG+G a++ + a+ Ga+++++d +e++ ++va+ l++ + + ++i++Dvt++++  +++++a+     g +d++v+NAGi     +++++
  KHJ30863.1  36 KTIIITGGASGFGAAFSCHWASHGAHIIIADVNEKQGKAVAEDLRKVSPHTYFIHCDVTSWKSQVNMFREAARLSphGYIDAVVANAGIsnsvPKFEDT 134
                 79********************************************************************9776577************8666444444 PP

                 GGCSHHHHHHH.......HHHHTHHHHHHHHHHHHHHH...................HCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHH CS
   adh_short  94 selseeewerv.......ievNltgvflltravlpaml...................kqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslake 166
                  +l++++   +       ++vNl gv+ +t++++  +                    k++  +   ++Sva+  +++ +  Y+ sK+av gl+r+++  
  KHJ30863.1 135 GDLDQDD---LprpefkvLDVNLIGVLYTTKLAIYWLQknsileksqqlhlspsegrKNRDMHLLLIGSVASIAGLPIL-EYTISKHAVLGLFRTMRAT 229
                 4455554...23334444***************998878888999999999888877777788*********9988865.7****************** PP

                 HGGGTEEEEEEEESSBSSHHH CS
   adh_short 167 laptgirvnavaPGlvdTdma 187
                    +girvn+++P ++dT+++
  KHJ30863.1 230 SFLQGIRVNILMPYFIDTPIV 250
                 ******************985 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.0   1.9e-24   6.8e-21       1     179 [.      42     250 ..      42     296 .. 0.82

  Alignments for each domain:
  == domain 1  score: 74.9 bits;  conditional E-value: 1.9e-24
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGH.HHHHHHHHHHTTSE.EEE--TTSHHHHHHHHHHHHHHH..SSEEEEEE-----EG..CSS-GGGH- CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneea.kkrveelaeelgae.vlecDVtdeeqvealveevvekf..gklDilvnnagiapk..lkgpflets 91 
                   G asg G+a   + a++Ga+++++d+ne++ k+ +e+l +  +++ +++cDVt+ ++  ++++e+++    g +D +v nagi+++  + +++ +++
    KHJ30863.1  42 GGASGFGAAFSCHWASHGAHIIIADVNEKQgKAVAEDLRKVSPHTyFIHCDVTSWKSQVNMFREAARLSphGYIDAVVANAGISNSvpKFEDTGDLD 138
                   6689**************************55555555555556646*****************9987666***************99778888888 PP

                   HHHHH....HHHHHHTHHHHHHHHHHHHHCTSC.....................CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGT CS
  adh_short_C2  92 reefd....raldvnlyslfllakaalplmkeg.....................gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkg 163
                   ++++     ++ldvnl ++++++k a+  ++++                       ++ + sv++  ++p    y+++K+a+ +l r++ +    +g
    KHJ30863.1 139 QDDLPrpefKVLDVNLIGVLYTTKLAIYWLQKNsileksqqlhlspsegrknrdMHLLLIGSVASIAGLPIL-EYTISKHAVLGLFRTMRATSFLQG 234
                   8887533336****************9966655577766788888877666554458888888777777764.6***************7777777* PP

                   EEEEEEEE--BHCTGG CS
  adh_short_C2 164 iRvNavspgpikTlaa 179
                   iRvN   p +i+T+++
    KHJ30863.1 235 IRVNILMPYFIDTPIV 250
                   *************986 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   9.8e-08   0.00035       2      94 ..      37     127 ..      36     141 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 9.8e-08
                 EEEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHS..S---EEEE------- CS
          KR   2 tylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaee..ppikGvihaAgvlrd 94 
                 t +itGG+ g+G +++ + a++ga+ ++    +    ++ ka  + l++   +  ++++Dv++ ++  ++++e+ +    + i  v+  Ag+++ 
  KHJ30863.1  37 TIIITGGASGFGAAFSCHWASHGAHIIIADVNE----KQGKAVAEDLRKVSPHTYFIHCDVTSWKSQVNMFREAARLSphGYIDAVVANAGISNS 127
                 679********************9766654444....455667788999999999********9988888888887776789********99875 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.3   2.7e-05     0.096       2      38 ..      36      74 ..      35      77 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.7e-05
                 SEEEE--SHHHHHHHHHH..HHTT--EEEE-SSSSS-HH CS
  HI0933_like  2 dviviGgGaAGlmaAisa..akrgkrVlllekakklgrK 38
                 ++i+i gGa+G+ aA s+  a++g+++++ + ++k g+ 
   KHJ30863.1 36 KTIIITGGASGFGAAFSChwASHGAHIIIADVNEKQGKA 74
                 689**************9999**************9985 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   7.1e-05      0.25       1      63 [.      38     106 ..      38     137 .. 0.78
   2 ?   -3.0   0.0       1.1   3.9e+03     141     164 ..     211     234 ..     208     243 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 7.1e-05
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC.......EEEE--TT-HHHHHHHHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl.......elveldltdrsalerlfkee 63 
                 i++tG++   G+a+  +++++g ++i  d ++++++  +++ l        ++++d+t  ++  ++f+e 
  KHJ30863.1  38 IIITGGASGFGAAFSCHWASHGAHIIIADVNEKQGKAVAED-LrkvsphtYFIHCDVTSWKSQVNMFREA 106
                 89**********************99999997777765554.4489*************99777777654 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHHHHHHHT-EE CS
   Epimerase 141 pYaaaKlageklveayaaqyglna 164
                  Y ++K+a+  l + ++a+  l+ 
  KHJ30863.1 211 EYTISKHAVLGLFRTMRATSFLQG 234
                 699999999999999888764444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2605.55
//
Query:       KHJ30864.1  [L=359]
Description: putative eukaryotic integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.7e-26   90.2   2.5    1.9e-25   89.3   2.5    1.5  1  DUF1751   Eukaryotic integral membrane protein (DUF1751)
  ------ inclusion threshold ------
      0.071   13.1  10.0       0.11   12.5  10.0    1.3  1  Rhomboid  Rhomboid family


Domain annotation for each model (and alignments):
>> DUF1751  Eukaryotic integral membrane protein (DUF1751)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.3   2.5   2.1e-29   1.9e-25       1      99 []      48     146 ..      48     146 .. 0.99

  Alignments for each domain:
  == domain 1  score: 89.3 bits;  conditional E-value: 2.1e-29
     DUF1751   1 PgallpypwtlltasfveqnvwkvlvslltlllggkylErlWgskEllkFilvvnvitnllvvlltlllylvtkseelllvpisGlagilagflvalkQ 99 
                 P+++l+ypwtl+ta++ve  ++ ++v +lt+++gg+ylEr+W s E+lkF+lv ++i+n++++ + ++l+ ++ +++++ + i+G+  ++++flva++Q
  KHJ30864.1  48 PTHSLYYPWTLFTATLVENDLIALTVAALTIFYGGRYLERAWTSAEFLKFLLVASFIPNIICYGVLFFLFKLSGNSDWTNTIIQGTLPLQISFLVAFSQ 146
                 899**********************************************************************************************99 PP

>> Rhomboid  Rhomboid family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5  10.0   1.3e-05      0.11       7     147 ..      55     208 ..      50     211 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.3e-05
                 TTHHHHGGG--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.....HHHHHHHHHHHHH-S........-EESSHHHHHHHHHHHHHHHHCCCC CS
    Rhomboid   7 lwrlltsmflHagwlHllfNmlallvfGsplerrlGslrflllyll.....sglagsllsllfsaeses.....plvGaSGaifgllgallvlvprnrk 95 
                  w+l+t++++  +++ l + +l +++ G  ler + s++fl + l+       ++ ++l++lf+  ++s     ++ G      ++l+a++ l+p +  
  KHJ30864.1  55 PWTLFTATLVENDLIALTVAALTIFYGGRYLERAWTSAEFLKFLLVasfipNIICYGVLFFLFKLSGNSdwtntIIQGTLPLQISFLVAFSQLIPAHTV 153
                 7*********************************************444444455889999999999889***************************** PP

                 GS----HC.....CCCCCCCCC.CHHHCTSSSTTTHHHHHHHHHHHHHHHHHHCC CS
    Rhomboid  96 llrkliia..llllllfillnl.vlgllpraggvsnlAHlgGllaGlllgllllr 147
                 +++k +i   ++ l ++ +l + +l+l+p  ++ s++  ++G+ a +++ +++ r
  KHJ30864.1 154 TIFKGLISirITRLSIIHILGVsLLALTPILSAASFFLDVAGFFASWIYLRFFKR 208
                 ****999967444444433333033444444889999999999999999888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       459  (0.025601); expected 358.6 (0.02)
Passed bias filter:                      228  (0.0127168); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.44
# Mc/sec: 2463.95
//
Query:       KHJ30865.1  [L=80]
Description: hypothetical protein EV44_g3327 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0066   16.2   0.2     0.0076   16.0   0.2    1.1  1  DUF5088   Domain of unknown function (DUF5088)
  ------ inclusion threshold ------
       0.13   12.7   0.0       0.17   12.3   0.0    1.2  1  LIFR_N    Leukemia inhibitory factor receptor N-terminal doma


Domain annotation for each model (and alignments):
>> DUF5088  Domain of unknown function (DUF5088)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.2   8.5e-07    0.0076      55     103 ..      15      63 ..      10      75 .. 0.92

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 8.5e-07
     DUF5088  55 vikkfrkkkkiealskidrntfsetkyfdvkEisvkeilkiellkkkek 103
                 +i+kf k  + ++ +k+++ t +e +yf++  + +k+ +k e l++k+ 
  KHJ30865.1  15 YIRKFIKPMRFNQANKLHYQTQAENHYFCIYQVESKNNFKFEALQDKDY 63 
                 699****************************************999875 PP

>> LIFR_N  Leukemia inhibitory factor receptor N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.9e-05      0.17      28      67 ..      33      73 ..      23      78 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.9e-05
      LIFR_N 28 yevCienrsrsCyrle.ktnikipalspgdheitinslhdf 67
                y+   en     y++e k n+k  al+  d+e+ i++ +++
  KHJ30865.1 33 YQTQAENHYFCIYQVEsKNNFKFEALQDKDYELHIQEWRQA 73
                55666777777788875899***************998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       944  (0.0526521); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 577.66
//
Query:       KHJ30866.1  [L=79]
Description: hypothetical protein EV44_g3338 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.095   13.0   0.0       0.11   12.8   0.0    1.2  1  DUF5543   Family of unknown function (DUF5543)


Domain annotation for each model (and alignments):
>> DUF5543  Family of unknown function (DUF5543)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0     6e-06      0.11      46      76 ..      12      42 ..       2      59 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6e-06
     DUF5543 46 heskhpafakqqinlempnsrattelawvcr 76
                 +s+ p +a+ qi+ ++pn+   t+ awv  
  KHJ30866.1 12 SNSRLPHIAESQIQYDFPNTMKETDEAWVTV 42
                67999***********************964 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       358  (0.0199677); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 592.39
//
Query:       KHJ30867.1  [L=243]
Description: hypothetical protein EV44_g1936 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-12   46.6   0.5    1.2e-11   45.3   0.5    1.7  1  NDUFA12   NADH ubiquinone oxidoreductase subunit NDUFA12


Domain annotation for each model (and alignments):
>> NDUFA12  NADH ubiquinone oxidoreductase subunit NDUFA12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.5   6.5e-16   1.2e-11       4      62 ..      29      92 ..      27     125 .. 0.78

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 6.5e-16
     NDUFA12  4 vGeDefGNkYyenkeele....grrrwveyaekak.dasqvppeWhgWlhhitdkppteekalk 62
                 G D +GN+Y+e +++l+    + rr+++y+ +a+    q+ p+Wh+Wl+h++ +pp+ ++ ++
  KHJ30867.1 29 AGLDLHGNTYWEFRDSLNshqhRMRRIIKYKMSAHhSDIQISPQWHQWLRHTRADPPSLTELSQ 92
                699**********97655556588999****887755889*****************9655443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       499  (0.027832); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1873.65
//
Query:       KHJ30868.1  [L=686]
Description: putative c2h2 transcription factor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-11   42.7  12.6    0.00022   21.5   0.7    3.9  3  zf-C2H2     Zinc finger, C2H2 type
    3.6e-08   33.6   7.8     0.0041   17.8   0.5    3.9  3  zf-C2H2_4   C2H2-type zinc finger
    0.00032   20.9   4.8     0.0039   17.4   1.9    2.5  2  zf-Di19     Drought induced 19 protein (Di19), zinc-binding
  ------ inclusion threshold ------
      0.028   14.0   0.5      0.089   12.4   0.5    1.8  1  zf-C2H2_12  Zinc-finger C2H2-type
       0.15   12.1   0.9       0.48   10.5   0.9    1.9  1  zf-BED      BED zinc finger
       0.26   11.8  12.8       0.88   10.1   0.5    4.5  4  zf-H2C2_2   Zinc-finger double domain


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   1.9   4.3e-05      0.13       1      23 []     548     573 ..     548     573 .. 0.97
   2 !   13.7   0.1   2.2e-05     0.067       6      23 .]     620     638 ..     620     638 .. 0.95
   3 !   21.5   0.7   7.3e-08   0.00022       3      23 .]     647     670 ..     646     670 .. 0.97

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.3e-05
                 EEET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                 y+C+  +C+ +F ++  L+rH r  H
  KHJ30868.1 548 YTCTyhGCTLRFDTPARLQRHKREgH 573
                 99*********************988 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 2.2e-05
                 TTEEESSHHHHHHHHHC.C CS
     zf-C2H2   6 CgksFkrksnLkrHirt.H 23 
                 C+ +F+r+++L+rH  t H
  KHJ30868.1 620 CNTVFSRPYDLTRHEDTiH 638
                 **************98888 PP

  == domain 3  score: 21.5 bits;  conditional E-value: 7.3e-08
                 ETTTT..EEESSHHHHHHHHHC.C CS
     zf-C2H2   3 CpdCg..ksFkrksnLkrHirt.H 23 
                 Cp+C   ksF+r++ L+rH+r+ H
  KHJ30868.1 647 CPICEdeKSFSRNDALTRHMRVvH 670
                 *********************999 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.6   0.00065       1.9       1      21 [.     548     570 ..     548     571 .. 0.93
   2 !    8.3   0.0    0.0016       4.7       6      24 .]     620     638 ..     616     638 .. 0.91
   3 !   17.8   0.5   1.4e-06    0.0041       2      24 .]     646     670 ..     645     670 .. 0.96

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00065
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlk 21 
                 ++C++  C+ +F ++ +L+rH +
  KHJ30868.1 548 YTCTYhgCTLRFDTPARLQRHKR 570
                 89*******************76 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0016
   zf-C2H2_4   6 CgksFsskkaLlrHlkthH 24 
                 C+++Fs++++L rH  t H
  KHJ30868.1 620 CNTVFSRPYDLTRHEDTIH 638
                 **************98877 PP

  == domain 3  score: 17.8 bits;  conditional E-value: 1.4e-06
   zf-C2H2_4   2 kCpiC..gksFsskkaLlrHlkthH 24 
                  CpiC   ksFs+++aL rH++ +H
  KHJ30868.1 646 HCPICedEKSFSRNDALTRHMRVVH 670
                 6*********************999 PP

>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.1     0.024        73       2      33 ..     547     581 ..     546     583 .. 0.79
   2 !   17.4   1.9   1.3e-06    0.0039      16      53 ..     629     670 ..     620     671 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.024
     zf-Di19   2 sftCPy..Cgkeltv.keLveHvedeHrveskevv 33 
                 ++tC y  C+  +++ ++L++H  + Hr++s  +v
  KHJ30868.1 547 TYTCTYhgCTLRFDTpARLQRHKREGHRSSSAAAV 581
                 578888667777765379**********9987665 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 1.3e-06
     zf-Di19  16 eLveHvedeHrveskevvCPvCaek....vtkdlvaHltleh 53 
                  L +H ++ H  ++++v CP+C+++     ++ l +H+++ h
  KHJ30868.1 629 DLTRHEDTIHNTQKQKVHCPICEDEksfsRNDALTRHMRVVH 670
                 6999******************96545433356788998877 PP

>> zf-C2H2_12  Zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.5     3e-05     0.089      18      59 ..     640     681 ..     638     683 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3e-05
  zf-C2H2_12  18 pqrrglvCmvCgeslaslklstikrHIrqvHPeslslseeek 59 
                  q+++++C +C+      + + + rH r vHPe ++ s++ +
  KHJ30868.1 640 TQKQKVHCPICEDEKSFSRNDALTRHMRVVHPEYVDTSSRRR 681
                 799******************************999998877 PP

>> zf-BED  BED zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.9   0.00016      0.48       9      44 .]     637     671 ..     633     671 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00016
                 ---GGSS--EETTTTEE----SSTHHHHHHHHHS-H CS
      zf-BED   9 pvslkeqkavCryCgkilsrgggttnLkrHLrrkHp 44 
                 ++++++qk+ C +C+ + s +     L rH+r  Hp
  KHJ30868.1 637 IHNTQKQKVHCPICEDEKSFS-RNDALTRHMRVVHP 671
                 67799*********8666665.559*******9998 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1      0.68     2e+03       6      17 ..      62      74 ..      62      75 .. 0.89
   2 ?    1.4   0.3      0.17   5.1e+02       2      11 ..     565     575 ..     564     578 .. 0.85
   3 ?   10.1   0.5    0.0003      0.88       1      24 [.     629     656 ..     629     658 .. 0.80
   4 ?    5.6   0.1    0.0079        24       1      11 [.     661     671 ..     661     674 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.68
   zf-H2C2_2  6 irkHtgekp.yeC 17
                i++Ht+  p ++C
  KHJ30868.1 62 IYTHTSNQPsFTC 74
                579**99999**9 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.17
   zf-H2C2_2   2 LrrHirk.Htg 11 
                 L+rH r+ H++
  KHJ30868.1 565 LQRHKREgHRS 575
                 99****98985 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.0003
   zf-H2C2_2   1 nLrrHirk.Htgekp.yeCplCd..kaF 24 
                 +L+rH  + H  +k  ++Cp C   k+F
  KHJ30868.1 629 DLTRHEDTiHNTQKQkVHCPICEdeKSF 656
                 699***977**77765******966666 PP

  == domain 4  score: 5.6 bits;  conditional E-value: 0.0079
   zf-H2C2_2   1 nLrrHirkHtg 11 
                 +L+rH+r+ ++
  KHJ30868.1 661 ALTRHMRVVHP 671
                 79*****8554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (686 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1044  (0.0582297); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 5043.40
//
Query:       KHJ30869.1  [L=280]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 2168.86
//
Query:       KHJ30870.1  [L=666]
Description: putative c2h2 type zinc finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.6e-13   49.2  16.8    2.4e-06   27.7   4.4    3.9  3  zf-C2H2          Zinc finger, C2H2 type
    1.4e-09   37.9  15.5    9.5e-07   29.0   1.0    4.3  4  zf-H2C2_2        Zinc-finger double domain
    8.2e-07   29.3  15.9      0.003   18.3   3.0    3.9  3  zf-C2H2_4        C2H2-type zinc finger
     0.0016   18.7   0.8      0.035   14.5   1.2    2.9  2  zf-met           Zinc-finger of C2H2 type
     0.0031   17.5   8.8       0.01   15.8   1.9    3.3  3  zf-C2H2_6        C2H2-type zinc finger
     0.0043   17.3   3.9       0.17   12.2   0.6    3.6  3  zf-C2H2_jaz      Zinc-finger double-stranded RNA-binding
  ------ inclusion threshold ------
      0.015   15.0   6.5       0.25   11.1   0.9    3.0  3  zf-C2H2_11       zinc-finger C2H2-type
      0.075   13.3   0.7       0.24   11.7   0.7    1.8  1  SPACA7           Sperm acrosome-associated protein 7
       0.49   11.0   4.2       0.16   12.5   1.0    1.8  2  Zn_ribbon_recom  Recombinase zinc beta ribbon domain
        1.3    9.2   6.6        2.2    8.5   2.7    2.5  2  C5HCH            NSD Cys-His rich domain


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   4.4   1.3e-09   2.4e-06       1      23 []     483     505 ..     483     505 .. 0.99
   2 !   14.2   2.8   2.5e-05     0.046       1      23 []     511     533 ..     511     533 .. 0.96
   3 !   12.4   0.0   9.4e-05      0.17       5      21 ..     552     568 ..     547     569 .. 0.92

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 1.3e-09
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 y+C+ C+k+F+r +nL++H+rtH
  KHJ30870.1 483 YQCHLCPKKFTRAYNLRSHLRTH 505
                 9*********************9 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 2.5e-05
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 + C++C+k F r+++ krH + H
  KHJ30870.1 511 FICSKCTKAFARQHDRKRHESLH 533
                 78*****************9998 PP

  == domain 3  score: 12.4 bits;  conditional E-value: 9.4e-05
                 TTTEEESSHHHHHHHHH CS
     zf-C2H2   5 dCgksFkrksnLkrHir 21 
                 +Cg++F r + L+rH r
  KHJ30870.1 552 GCGRPFARADALNRHFR 568
                 7**************88 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.9   0.00024      0.44      14      26 .]     480     494 ..     471     494 .. 0.78
   2 !   29.0   1.0   5.3e-10   9.5e-07       1      25 [.     497     521 ..     497     522 .. 0.96
   3 ?    4.9   0.3     0.021        38       3      17 ..     527     541 ..     525     542 .. 0.87
   4 ?    0.2   0.0      0.68   1.2e+03       1       8 [.     562     569 ..     562     572 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00024
   zf-H2C2_2  14 p..yeCplCdkaFkt 26 
                 p  y+C lC+k+F++
  KHJ30870.1 480 PatYQCHLCPKKFTR 494
                 355**********85 PP

  == domain 2  score: 29.0 bits;  conditional E-value: 5.3e-10
   zf-H2C2_2   1 nLrrHirkHtgekpyeCplCdkaFk 25 
                 nLr H+r+Ht+e+p+ C++C kaF+
  KHJ30870.1 497 NLRSHLRTHTNERPFICSKCTKAFA 521
                 8***********************8 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.021
   zf-H2C2_2   3 rrHirkHtgekpyeC 17 
                 +rH   H gek++ C
  KHJ30870.1 527 KRHESLHSGEKRFIC 541
                 7**********9855 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.68
   zf-H2C2_2   1 nLrrHirk 8  
                 +L+rH+r+
  KHJ30870.1 562 ALNRHFRS 569
                 79****95 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   3.0   1.7e-06     0.003       1      23 [.     483     505 ..     483     506 .. 0.97
   2 !    8.4   2.4    0.0025       4.4       1      23 [.     511     533 ..     511     534 .. 0.91
   3 !    8.4   0.0    0.0025       4.5       6      22 ..     553     569 ..     550     570 .. 0.93

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 1.7e-06
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 ++C++C+k F++ ++L++Hl+th
  KHJ30870.1 483 YQCHLCPKKFTRAYNLRSHLRTH 505
                 89********************9 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0025
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 f+C+ C+k F ++++ +rH   h
  KHJ30870.1 511 FICSKCTKAFARQHDRKRHESLH 533
                 89*************899*9888 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.0025
   zf-C2H2_4   6 CgksFsskkaLlrHlkt 22 
                 Cg++F + +aL+rH+++
  KHJ30870.1 553 CGRPFARADALNRHFRS 569
                 **************986 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   1.2     2e-05     0.035       1      23 [.     483     505 ..     483     507 .. 0.92
   2 ?   -0.3   0.0      0.86   1.5e+03       6      22 ..     553     569 ..     553     570 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2e-05
      zf-met   1 fyCelCnvtfnsesqlksHlqGK 23 
                 ++C lC ++f+   +l+sHl+ +
  KHJ30870.1 483 YQCHLCPKKFTRAYNLRSHLRTH 505
                 79******************965 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.86
      zf-met   6 CnvtfnsesqlksHlqG 22 
                 C + f    +l+ H+++
  KHJ30870.1 553 CGRPFARADALNRHFRS 569
                 778899999******98 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   1.9   5.6e-06      0.01       2      24 ..     483     505 ..     482     508 .. 0.95
   2 ?    3.8   0.4     0.033        59       2      14 ..     511     523 ..     511     525 .. 0.89
   3 ?   -0.5   0.0      0.74   1.3e+03       7      20 ..     553     566 ..     553     569 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 5.6e-06
   zf-C2H2_6   2 heCsvCsksFpslqaLggHkksH 24 
                 + C+ C k F   ++L+ H+++H
  KHJ30870.1 483 YQCHLCPKKFTRAYNLRSHLRTH 505
                 99********************* PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.033
   zf-C2H2_6   2 heCsvCsksFpsl 14 
                 ++Cs C k F  +
  KHJ30870.1 511 FICSKCTKAFARQ 523
                 89********865 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.74
   zf-C2H2_6   7 CsksFpslqaLggH 20 
                 C++ F   +aL+ H
  KHJ30870.1 553 CGRPFARADALNRH 566
                 9999********99 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.6   9.3e-05      0.17       4      24 ..     485     505 ..     482     505 .. 0.93
   2 ?    1.2   0.4      0.27   4.9e+02       2      22 ..     511     531 ..     510     531 .. 0.91
   3 ?    2.2   0.0      0.13   2.4e+02       7      23 ..     553     569 ..     553     571 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 9.3e-05
                  BTTTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz   4 CvlCdKyFksenaldnHlkSK 24 
                  C lC K F  +++l+ Hl+++
   KHJ30870.1 485 CHLCPKKFTRAYNLRSHLRTH 505
                  ******************986 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.27
                  CBBTTTTBBBSSHHHHHCCTT CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHlk 22 
                  f C  C K F  +++ + H++
   KHJ30870.1 511 FICSKCTKAFARQHDRKRHES 531
                  88999**************85 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.13
                  TTBBBSSHHHHHCCTTS CS
  zf-C2H2_jaz   7 CdKyFksenaldnHlkS 23 
                  C + F  + al  H++S
   KHJ30870.1 553 CGRPFARADALNRHFRS 569
                  9999***********99 PP

>> zf-C2H2_11  zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.9   0.00014      0.25       3      25 ..     481     503 ..     480     505 .. 0.94
   2 ?   -2.6   0.3       2.8     5e+03       7      23 ..     513     529 ..     511     530 .. 0.80
   3 ?    5.9   0.0     0.006        11      10      24 ..     553     567 ..     551     568 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00014
  zf-C2H2_11   3 stcqCleCGlcftSqlsLsRHlf 25 
                 +t+qC +C  +ft +  L+ Hl+
  KHJ30870.1 481 ATYQCHLCPKKFTRAYNLRSHLR 503
                 69*******************97 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.8
  zf-C2H2_11   7 CleCGlcftSqlsLsRH 23 
                 C +C   f+ q   +RH
  KHJ30870.1 513 CSKCTKAFARQHDRKRH 529
                 99999999888776777 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.006
  zf-C2H2_11  10 CGlcftSqlsLsRHl 24 
                 CG+ f+ + +L+RH 
  KHJ30870.1 553 CGRPFARADALNRHF 567
                 **************7 PP

>> SPACA7  Sperm acrosome-associated protein 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.7   0.00014      0.24      23      97 ..      26     101 ..      14     108 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00014
      SPACA7  23 skqediaevldEiLvqeiLdpnktssaeksstastlstkeihakideny..QkeasenYhellenlqfspgtedkik 97 
                 +k++d +e++   L    L+ +++s +++ s  +  st++i + i+  y  Q +  +++h+  + lqf+p+ e k +
  KHJ30870.1  26 QKNTDTSEIVPS-LGGSFLNSSQNSIKNNISSFQNSSTPFIGNSISPDYklQSDLDQQFHKQENSLQFTPTVESKKN 101
                 555666665543.56678999999*99999*************96666622777789****************9975 PP

>> Zn_ribbon_recom  Recombinase zinc beta ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1        10   1.8e+04       8      18 ..     485     495 ..     479     504 .. 0.62
   2 ?   12.5   1.0   8.7e-05      0.16       7      53 ..     512     567 ..     511     570 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 10
  Zn_ribbon_recom   8 CgeCGspmtrr 18 
                      C  C +++tr 
       KHJ30870.1 485 CHLCPKKFTRA 495
                      55555555553 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 8.7e-05
  Zn_ribbon_recom   7 rCgeCGspmtrrkrkgkr.......hyYrCstyrrkgk..kCsnhsireekleeav 53 
                      +C +C +++ r++ +++         +++C++  ++g   +C  +  r+++l +++
       KHJ30870.1 512 ICSKCTKAFARQHDRKRHeslhsgeKRFICRGELKNGGhwGCGRPFARADALNRHF 567
                      7**********66544445677777********99997566**********98876 PP

>> C5HCH  NSD Cys-His rich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   2.7    0.0012       2.2       9      44 ..     479     515 ..     475     519 .. 0.83
   2 ?    3.3   1.4     0.053        95      14      43 ..     512     542 ..     505     546 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0012
       C5HCH   9 kaatsfCefCPssFCkeHe.kGalvasalegrlcCse 44 
                 ++at  C++CP+ F +  + + +l +++ e  + Cs+
  KHJ30870.1 479 HPATYQCHLCPKKFTRAYNlRSHLRTHTNERPFICSK 515
                 68999***********987467888888888899987 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.053
       C5HCH  14 fCefCPssFCkeHekGa.lvasalegrlcCs 43 
                  C  C ++F ++H++     +++ e+r+ C 
  KHJ30870.1 512 ICSKCTKAFARQHDRKRhESLHSGEKRFICR 542
                 6999*********875514568888888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (666 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       746  (0.0416086); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 4480.08
//
Query:       KHJ30871.1  [L=351]
Description: putative zinc finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.3e-08   33.2   0.0    1.1e-07   32.3   0.0    1.4  1  OTU        OTU-like cysteine protease
  ------ inclusion threshold ------
      0.089   13.1   2.3       0.16   12.3   2.3    1.4  1  zf-C2H2_2  C2H2 type zinc-finger (2 copies)


Domain annotation for each model (and alignments):
>> OTU  OTU-like cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0   1.3e-11   1.1e-07       3      87 ..     156     242 ..     154     268 .. 0.81

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 1.3e-11
                 SS-HHHHHHHHCCCSS.SHCCHHHHHHHHHCHHHHHH.TSSHHCCHHHHCCHHHHHHHTTSTTHHHHHHHHHHHHHHCTS-EEE.....ET CS
         OTU   3 DGnCLlravsqqlwgvsdelrkakvseLreklaeylr.ehseelelfleeeeegylkeiektaawggeleifalahiLrrpIiV.....lk 87 
                 D  CL+ra   ++      +++++  eLr+ +a++++ eh + ++ +le++ + y++ i+ + awgg++e+ +la+ ++  I       l+
  KHJ30871.1 156 DNSCLFRAFGSAVL----PGDDKSMPELRSLVASVIQfEHETYTKAVLEKSPDDYCRWIQTPNAWGGAIELGILAKHFDIEICSvdvetLR 242
                 557**********9....78888889**********99999999*******9**************************9988532445544 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.3   1.8e-05      0.16      41      79 ..     311     349 ..     295     351 .] 0.88

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.8e-05
   zf-C2H2_2  41 eylrekieekleClyCekefkslealreHmkkkgHckin 79 
                 +y +++++ k +C +C+   +  ++  +H ++ gH  ++
  KHJ30871.1 311 HYYTNTVTMKIKCKVCNMMLHGEKQAAKHAQQSGHYDME 349
                 688999999**********99**************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.20s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2563.88
//
Query:       KHJ30872.1  [L=280]
Description: putative c2h2 finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.2e-09   35.4  12.9     0.0041   17.8   0.8    4.7  4  zf-C2H2_4      C2H2-type zinc finger
    1.5e-08   34.7  14.4     0.0021   18.4   0.0    4.5  4  zf-C2H2        Zinc finger, C2H2 type
    6.7e-06   26.2  19.9      0.025   14.9   4.3    4.3  4  zf-C2H2_jaz    Zinc-finger double-stranded RNA-binding
    0.00017   21.8   9.0     0.0027   18.0   5.5    2.5  2  zf-C2H2_8      C2H2-type zinc ribbon
  ------ inclusion threshold ------
       0.05   13.9  19.0        2.8    8.3   1.0    4.0  4  zf-C2H2_2      C2H2 type zinc-finger (2 copies)
      0.054   13.9   1.7      0.054   13.9   1.7    4.0  4  zf-met         Zinc-finger of C2H2 type
      0.089   13.3  13.4       0.78   10.3   1.0    3.9  4  zf-H2C2_2      Zinc-finger double domain
       0.14   12.2   7.4       0.47   10.6   5.1    2.6  2  zf-C2H2_aberr  Aberrant zinc-finger
       0.16   12.0   0.1       0.16   12.0   0.1    3.6  3  zf-C2H2_6      C2H2-type zinc finger
       0.16   11.9   8.3        1.8    8.6   0.6    3.5  3  zf-LYAR        LYAR-type C2HC zinc finger
       0.32   11.2   7.2        1.2    9.3   0.0    3.4  4  zf_ZIC         Zic proteins zinc finger domain
        3.1    8.3  13.0        2.6    8.5   0.1    3.5  2  zf-C2HE        C2HE / C2H2 / C2HC zinc-binding finger
        3.6    8.3   9.6        2.1    9.0   0.5    3.4  3  FOXP-CC        FOXP coiled-coil domain


Domain annotation for each model (and alignments):
>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   0.00011      0.15       2      22 ..       9      29 ..       8      30 .. 0.92
   2 ?    1.9   0.0       0.4   5.5e+02      13      22 ..      92     101 ..      86     102 .. 0.79
   3 !   17.8   0.8     3e-06    0.0041       1      22 [.     178     201 ..     178     203 .. 0.94
   4 !    7.6   1.1    0.0059       8.2       2      22 ..     210     230 ..     209     232 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00011
   zf-C2H2_4  2 kCpiCgksFsskkaLlrHlkt 22
                kC  C+k+F++  aL  H+++
  KHJ30872.1  9 KCQGCSKTFPRLGALVAHIES 29
                8*****************975 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.4
   zf-C2H2_4  13 kkaLlrHlkt 22 
                 +++L++H+k+
  KHJ30872.1  92 NSTLSNHMKN 101
                 466*****96 PP

  == domain 3  score: 17.8 bits;  conditional E-value: 3e-06
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkt 22 
                 +kCp+  Cgk+F++k+++ +Hl++
  KHJ30872.1 178 YKCPHksCGKTFKNKTGFMQHLNS 201
                 89*******************986 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.0059
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlkt 22 
                 kC  C k F + +aL +H+++
  KHJ30872.1 210 KCINCLKHFATATALTQHCES 230
                 8*9***************986 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   1.5e-06    0.0021       2      20 ..       9      27 ..       8      29 .. 0.93
   2 ?    0.6   0.1      0.67   9.3e+02      12      21 ..      91     100 ..      90     101 .. 0.86
   3 !   17.0   2.5   4.1e-06    0.0057       1      23 []     178     204 ..     178     204 .. 0.92
   4 ?    4.2   0.3      0.05        69       2      19 ..     210     227 ..     209     227 .. 0.90

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1.5e-06
                EETTTTEEESSHHHHHHHH CS
     zf-C2H2  2 kCpdCgksFkrksnLkrHi 20
                kC +C+k+F+r   L++Hi
  KHJ30872.1  9 KCQGCSKTFPRLGALVAHI 27
                8*****************9 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.67
                 SHHHHHHHHH CS
     zf-C2H2  12 rksnLkrHir 21 
                 ++s L +H++
  KHJ30872.1  91 NNSTLSNHMK 100
                 6899*****8 PP

  == domain 3  score: 17.0 bits;  conditional E-value: 4.1e-06
                 EEET..TTTEEESSHHHHHHHHHC..C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt..H 23 
                 ykCp   Cgk+Fk+k  +++H+++  H
  KHJ30872.1 178 YKCPhkSCGKTFKNKTGFMQHLNSqaH 204
                 9********************987555 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.05
                 EETTTTEEESSHHHHHHH CS
     zf-C2H2   2 kCpdCgksFkrksnLkrH 19 
                 kC  C k F +   L++H
  KHJ30872.1 210 KCINCLKHFATATALTQH 227
                 5668*************9 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0038       5.3       3      24 ..       9      30 ..       7      31 .. 0.90
   2 ?   -0.4   0.3       1.1   1.5e+03      13      22 ..      91     100 ..      84     101 .. 0.74
   3 !   14.9   4.3   1.8e-05     0.025       6      27 .]     184     205 ..     177     205 .. 0.93
   4 !   12.2   1.4   0.00012      0.17       2      23 ..     209     230 ..     208     232 .. 0.91

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0038
                 BBTTTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz  3 YCvlCdKyFksenaldnHlkSK 24
                  C+ C+K+F    al +H+ S 
   KHJ30872.1  9 KCQGCSKTFPRLGALVAHIESS 30
                 6999***************985 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.1
                  SHHHHHCCTT CS
  zf-C2H2_jaz  13 senaldnHlk 22 
                  + ++l nH+k
   KHJ30872.1  91 NNSTLSNHMK 100
                  6678888887 PP

  == domain 3  score: 14.9 bits;  conditional E-value: 1.8e-05
                  TTTBBBSSHHHHHCCTTSHHHH CS
  zf-C2H2_jaz   6 lCdKyFksenaldnHlkSKkHK 27 
                   C K+Fk+   + +Hl+S +H+
   KHJ30872.1 184 SCGKTFKNKTGFMQHLNSQAHR 205
                  5********************7 PP

  == domain 4  score: 12.2 bits;  conditional E-value: 0.00012
                  CBBTTTTBBBSSHHHHHCCTTS CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHlkS 23 
                  + C+ C K+F ++ al +H+ S
   KHJ30872.1 209 LKCINCLKHFATATALTQHCES 230
                  57*****************988 PP

>> zf-C2H2_8  C2H2-type zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.1     0.026        36      41      57 ..      11      27 ..       5      66 .. 0.78
   2 !   18.0   5.5     2e-06    0.0027      35      87 ..     177     229 ..     174     238 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.026
   zf-C2H2_8 41 ascaetfpsmqelvaht 57
                + c++tfp +  lvah 
  KHJ30872.1 11 QGCSKTFPRLGALVAHI 27
                46888888888888875 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 2e-06
   zf-C2H2_8  35 lfrcstascaetfpsmqelvahtklhykpnryfkcencllrfrthrslfkhlh 87 
                 +++c  +sc +tf     ++ h + + + n  +kc ncl  f t  +l +h  
  KHJ30872.1 177 KYKCPHKSCGKTFKNKTGFMQHLNSQAHRNEELKCINCLKHFATATALTQHCE 229
                 689*********************************************99965 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.4    0.0025       3.4      47      79 ..       4      36 ..       1      61 [. 0.84
   2 ?   -0.2   0.0      0.94   1.3e+03      59      74 ..      88     103 ..      85     114 .. 0.75
   3 ?    8.3   1.0     0.002       2.8      54      77 ..     183     206 ..     173     209 .. 0.82
   4 ?    7.7   2.3    0.0033       4.5      49      81 ..     207     240 ..     205     253 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0025
   zf-C2H2_2 47 ieekleClyCekefkslealreHmkkkgHckin 79
                ++++l+C  C+k+f  l al +H+++ + + + 
  KHJ30872.1  4 LSQNLKCQGCSKTFPRLGALVAHIESSQCKSMT 36
                67899*******************998876664 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.94
   zf-C2H2_2  59 efkslealreHmkkkg 74 
                 ++++ ++l +Hmk+ g
  KHJ30872.1  88 KNQNNSTLSNHMKNDG 103
                 5667888999998765 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.002
   zf-C2H2_2  54 lyCekefkslealreHmkkkgHck 77 
                   C+k+fk++  +++H++++ H++
  KHJ30872.1 183 KSCGKTFKNKTGFMQHLNSQAHRN 206
                 46********************85 PP

  == domain 4  score: 7.7 bits;  conditional E-value: 0.0033
   zf-C2H2_2  49 ekleClyCekefkslealreHmkkk.gHckinee 81 
                 e+l+C+ C k+f +  al++H +++   cki+ +
  KHJ30872.1 207 EELKCINCLKHFATATALTQHCESQsLRCKIRDS 240
                 5799******************876256777543 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.009        12       2      22 ..       9      29 ..       8      31 .. 0.91
   2 ?   -2.1   0.2       4.3     6e+03      12      21 ..      91     100 ..      90     100 .. 0.80
   3 ?   13.9   1.7   3.9e-05     0.054       6      25 .]     185     204 ..     183     204 .. 0.95
   4 ?    2.3   0.8      0.18   2.5e+02       6      22 ..     214     230 ..     213     231 .. 0.94

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.009
      zf-met  2 yCelCnvtfnsesqlksHlqG 22
                 C  C +tf   ++l +H  +
  KHJ30872.1  9 KCQGCSKTFPRLGALVAHIES 29
                6999**************987 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 4.3
      zf-met  12 sesqlksHlq 21 
                 + s+l +H++
  KHJ30872.1  91 NNSTLSNHMK 100
                 568999**96 PP

  == domain 3  score: 13.9 bits;  conditional E-value: 3.9e-05
      zf-met   6 CnvtfnsesqlksHlqGKkH 25 
                 C +tf++++ + +Hl+++ H
  KHJ30872.1 185 CGKTFKNKTGFMQHLNSQAH 204
                 ******************99 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.18
      zf-met   6 CnvtfnsesqlksHlqG 22 
                 C + f   ++l +H  +
  KHJ30872.1 214 CLKHFATATALTQHCES 230
                 99************988 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.2     0.096   1.3e+02      15      24 ..       8      17 ..       2      19 .. 0.85
   2 ?   -2.7   0.0       7.1   9.8e+03       2       7 ..      95     100 ..      95     101 .. 0.82
   3 ?   10.3   1.0   0.00056      0.78      14      26 .]     177     191 ..     169     191 .. 0.92
   4 ?    7.0   0.3    0.0063       8.6       9      26 .]     204     220 ..     194     220 .. 0.72

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.096
   zf-H2C2_2 15 yeCplCdkaF 24
                ++C  C+k+F
  KHJ30872.1  8 LKCQGCSKTF 17
                69*******9 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 7.1
   zf-H2C2_2   2 LrrHir 7  
                 L+ H++
  KHJ30872.1  95 LSNHMK 100
                 789*98 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.00056
   zf-H2C2_2  14 pyeCp..lCdkaFkt 26 
                 +y+Cp  +C+k+Fk+
  KHJ30872.1 177 KYKCPhkSCGKTFKN 191
                 59****99*****98 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.0063
   zf-H2C2_2   9 HtgekpyeCplCdkaFkt 26 
                 H++e +++C  C k F+t
  KHJ30872.1 204 HRNE-ELKCINCLKHFAT 220
                 6666.49*********86 PP

>> zf-C2H2_aberr  Aberrant zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.44   6.1e+02     145     163 ..      10      28 ..       6      45 .. 0.82
   2 ?   10.6   5.1   0.00034      0.47       1      63 [.     178     230 ..     178     253 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.44
  zf-C2H2_aberr 145 ipGCgkrfkslmaYkYhck 163
                     +GC k f  l a + h +
     KHJ30872.1  10 CQGCSKTFPRLGALVAHIE 28 
                    579*****99999998865 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00034
  zf-C2H2_aberr   1 ykClykaCdlkyssvlglrrhlveykhslytnsefslkCpvrkCsesivelentelleehlek 63 
                    ykC++k+C+ ++++  g+ +hl    h      + +lkC   +C   + ++ +   l++h e 
     KHJ30872.1 178 YKCPHKSCGKTFKNKTGFMQHLNSQAH-----RNEELKC--INC---LKHFATATALTQHCES 230
                    9**************************.....3458998..467...6666666666666665 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   0.00011      0.16       3      20 ..       9      26 ..       9      27 .. 0.94
   2 ?    1.9   1.1      0.17   2.4e+02       5      15 ..     183     193 ..     178     207 .. 0.68
   3 ?    3.4   1.4     0.057        79       4      20 ..     211     227 ..     210     228 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00011
   zf-C2H2_6  3 eCsvCsksFpslqaLggH 20
                +C+ Csk+Fp l aL  H
  KHJ30872.1  9 KCQGCSKTFPRLGALVAH 26
                7*************9888 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.17
   zf-C2H2_6   5 svCsksFpslq 15 
                 + C+k+F+  +
  KHJ30872.1 183 KSCGKTFKNKT 193
                 68*****8555 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.057
   zf-C2H2_6   4 CsvCsksFpslqaLggH 20 
                 C  C+k F + +aL+ H
  KHJ30872.1 211 CINCLKHFATATALTQH 227
                 777***********999 PP

>> zf-LYAR  LYAR-type C2HC zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.1     0.068        94       3      18 ..      10      26 ..       8      32 .. 0.77
   2 ?    3.7   0.2     0.043        59       6      18 ..     185     198 ..     184     200 .. 0.82
   3 ?    8.6   0.6    0.0013       1.8       2      19 ..     210     228 ..     209     229 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.068
     zf-LYAR  3 CiDCsktFdg.deykaH 18
                C  CsktF +     aH
  KHJ30872.1 10 CQGCSKTFPRlGALVAH 26
                777*****876655555 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.043
     zf-LYAR   6 CsktFdg.deykaH 18 
                 C+ktF++ + + +H
  KHJ30872.1 185 CGKTFKNkTGFMQH 198
                 ******97777777 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.0013
     zf-LYAR   2 sCiDCsktFdg.deykaHt 19 
                  Ci C k+F + +   +H+
  KHJ30872.1 210 KCINCLKHFATaTALTQHC 228
                 5********9977777775 PP

>> zf_ZIC  Zic proteins zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00084       1.2      20      38 ..       9      27 ..       2      30 .. 0.86
   2 ?    4.0   0.5     0.039        53      20      37 ..     181     198 ..     176     202 .. 0.77
   3 ?   -1.9   0.2       2.7   3.7e+03      23      37 ..     213     227 ..     206     231 .. 0.79
   4 ?   -1.8   0.1       2.6   3.6e+03       5      17 ..     230     242 ..     226     247 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00084
                S-------BSSHHHHHHHH CS
      zf_ZIC 20 pkkpCsktFstmhelVtHl 38
                + + CsktF ++  lV+H+
  KHJ30872.1  9 KCQGCSKTFPRLGALVAHI 27
                5578**************8 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.039
                 S-------BSSHHHHHHH CS
      zf_ZIC  20 pkkpCsktFstmhelVtH 37 
                 p+k+C+ktF+       H
  KHJ30872.1 181 PHKSCGKTFKNKTGFMQH 198
                 89*******976655555 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 2.7
                 -----BSSHHHHHHH CS
      zf_ZIC  23 pCsktFstmhelVtH 37 
                  C k+F t   l  H
  KHJ30872.1 213 NCLKHFATATALTQH 227
                 599999997777766 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 2.6
                 ---B---B--TT- CS
      zf_ZIC   5 kqelsCkWideeq 17 
                 +q l Ck +d++ 
  KHJ30872.1 230 SQSLRCKIRDSDS 242
                 58999*9999876 PP

>> zf-C2HE  C2HE / C2H2 / C2HC zinc-binding finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1    0.0019       2.6      34      60 ..       4      29 ..       2      33 .. 0.87
   2 ?    0.2   8.2      0.77   1.1e+03      29      59 ..     201     229 ..     167     232 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0019
     zf-C2HE 34 lktpLkCtrCganfgnkfpkLKeHLee 60
                l+++LkC  C+ + +  + +L +H+e+
  KHJ30872.1  4 LSQNLKCQGCS-KTFPRLGALVAHIES 29
                6799*******.888899999999985 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.77
     zf-C2HE  29 skelilktpLkCtrCganfgnkfpkLKeHLe 59 
                 s +  ++++LkC  C  + + +  +L +H e
  KHJ30872.1 201 S-QAHRNEELKCINCL-KHFATATALTQHCE 229
                 3.35599*********.88999999999965 PP

>> FOXP-CC  FOXP coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1      0.22     3e+02      11      29 ..      12      30 ..       6      56 .. 0.82
   2 ?    9.0   0.5    0.0015       2.1       6      34 ..     179     207 ..     174     213 .. 0.80
   3 ?    1.0   0.6       0.5   6.9e+02      11      29 ..     213     231 ..     210     246 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.22
     FOXP-CC 11 gCekvledveeflkhlnse 29
                gC+k +  ++++++h++s+
  KHJ30872.1 12 GCSKTFPRLGALVAHIESS 30
                89*************9875 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0015
     FOXP-CC   6 vCkWPgCekvledveeflkhlnseHaldd 34 
                  C    C k +++ + f++hlns+ + ++
  KHJ30872.1 179 KCPHKSCGKTFKNKTGFMQHLNSQAHRNE 207
                 566678****************9766554 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.5
     FOXP-CC  11 gCekvledveeflkhlnse 29 
                 +C k++ +++++++h++s+
  KHJ30872.1 213 NCLKHFATATALTQHCESQ 231
                 7999999999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       661  (0.0368676); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2129.67
//
Query:       KHJ30873.1  [L=1086]
Description: putative protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.3e-43  146.8   0.0    1.8e-42  145.5   0.0    1.7  1  Pkinase      Protein kinase domain
    1.6e-24   86.6   0.0    3.4e-24   85.5   0.0    1.5  1  Pkinase_Tyr  Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.5   0.0     2e-46   1.8e-42       1     261 [.     707    1049 ..     707    1052 .. 0.88

  Alignments for each domain:
  == domain 1  score: 145.5 bits;  conditional E-value: 2e-46
                  EEEEEEEEEESSEEEEEEEETTTTE............EEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEB CS
     Pkinase    1 yekleklGeGsfGkVykaveketgk............ivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekdelylvleyvegge 84  
                  +ek+e +G+G+f+ V++++ek++++             +AvKk ++  +  k++++ l+E+++lk l  +++iv+l++++e+k++ly+ +e++e+g+
  KHJ30873.1  707 FEKVEMIGTGQFSYVFRVTEKDSSQdskpsslpmpdrVFAVKKSRQPFQGIKDRERKLQEVNVLKALGhSDHIVHLLDTWEDKNHLYIQTEFCEEGS 803 
                  68899**************99986422222222222279***********9999**************678************************** PP

                  HHHHHH...HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHH CS
     Pkinase   85 ladlle...rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkv 178 
                  ++ +l+   rkg l++ ++ ki+ ++  gl+++H+ g+iH DlKp+N+Li  +g+lKi+DFG+a+ +  +    +  g++eY+ PE+l e  y+k++
  KHJ30873.1  804 MDLFLSqvgRKGRLDDFRIWKILLELGLGLKHIHDFGFIHLDLKPANVLITFEGVLKIADFGIATAWPAQP-GIEGEGDREYIGPEIL-EGIYDKPA 898 
                  99999989999**********************************************************98.8899************.6789**** PP

                  HHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHT..HHHHHHHCTSHH...HHHTTS........................................ CS
     Pkinase  179 DvWslGvilyelltgkppfsgekgkekvekeldq..lekilkilgetkeklpeasei........................................ 233 
                  Dv+slG++++e+ +g+  ++   ++  +++ l+   +  +        +++  +++                                         
  KHJ30873.1  899 DVFSLGLMMLEI-AGNVQLP---DNGPTWQRLRSgdVSDVPS------LTWSSDNHTrrdatgtpiddnelalgslgsdddietefgspsisgrrrn 985 
                  ***********9.8898899...4555566666622233333......23333333333446788999***************************** PP

                  ....................................-HHHHHHHHHHT-SSGCCSTTHHHHHTS CS
     Pkinase  234 ....................................seeakdllkkllkkdpkkRltaeellqh 261 
                                                      ++++ +l++++++ +p++R+ ++ellq+
  KHJ30873.1  986 ygrscrslshdpsnlfgsmrrgelhkapnfmtdmyhQNSLDQLVRWMITPNPNHRPVVHELLQS 1049
                  *************************************************************997 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.5   0.0   3.8e-28   3.4e-24       3     205 ..     709     917 ..     707     931 .. 0.86

  Alignments for each domain:
  == domain 1  score: 85.5 bits;  conditional E-value: 3.8e-28
                  EEEEEEEESSEEEEEEEEET........TTTSSEEEEEEEEESTTSS.HHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHH CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkg........ekekkevkVavKtlkeeat.eeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlk 90 
                    + +G G+f+ V++ t k+        +    +   avK+ ++  +  +++e+ l+e++++k+l + ++iv+ll    ++++l+i te++++G+++ 
   KHJ30873.1 709 KVEMIGTGQFSYVFRVTEKDssqdskpsSLPMPDRVFAVKKSRQPFQgIKDRERKLQEVNVLKALgHSDHIVHLLDTWEDKNHLYIQTEFCEEGSMDL 806
                  5689**************9987655443333445668****97765515569999**********9999***************************** PP

                  HHHHT.CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHH CS
  Pkinase_Tyr  91 fLrkk.ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksD 187
                  fL +  +k +l+  ++ ++ l++  G++++++  ++H dl   NvL++ + v ki+DfG+a +       +   e++   +++ pE+l e+ + + +D
   KHJ30873.1 807 FLSQVgRKGRLDDFRIWKILLELGLGLKHIHDFGFIHLDLKPANVLITFEGVLKIADFGIATAW----PAQPGIEGEGDREYIGPEIL-EGIYDKPAD 899
                  **99745667777789***********************************************9....5555666777889*****87.589****** PP

                  HHHHHHHHHHHHTTSSGT CS
  Pkinase_Tyr 188 vWsfGvllwEiftlgesp 205
                  v+s G ++ Ei+ + + p
   KHJ30873.1 900 VFSLGLMMLEIAGNVQLP 917
                  ***********9776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1086 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.41
# Mc/sec: 7884.13
//
Query:       KHJ30874.1  [L=467]
Description: putative transcriptional coactivator hfi1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-57  195.1   0.0    2.1e-57  194.6   0.0    1.2  1  SAGA-Tad1  Transcriptional regulator of RNA polII, SAGA, subu


Domain annotation for each model (and alignments):
>> SAGA-Tad1  Transcriptional regulator of RNA polII, SAGA, subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.6   0.0   1.2e-61   2.1e-57       3     233 ..      63     298 ..      61     300 .. 0.86

  Alignments for each domain:
  == domain 1  score: 194.6 bits;  conditional E-value: 1.2e-61
   SAGA-Tad1   3 nsRidleelkeqlkkkLgperwekYfellsrFlsgklskkEldklvdriLgre...nlhLHNqLllsIlkNalrespd.clakt....ppsatakkkks 93 
                 ++Ri+le+l+ +lk + g e+w +Y+++l +Flsg+l+++El+ ++d ++ ++   ++hLHNqL+ +I+ N++re pd + a++    +     k    
  KHJ30874.1  63 PPRINLEPLYMALKIAFG-ENWPTYKDALIKFLSGNLNQAELSAQIDHFIVTSkgeKEHLHNQLISAIYGNTTRELPDhNIATWvsanD-----KPF-- 153
                 68****************.*******************************988888**************************9943332.....111.. PP

   SAGA-Tad1  94 slkkspkksrsgdsqeerlkkrvmslpprdrkrlkaitkeagvlaeesskpki..svvseeetekrekennsk............ewsqeirspvaaPL 178
                        k +sgd++e+rlk +vm+lp++dr+rlk+++k+ +      ++++i  +++ e+++ k++ +  ++            ++++eir+++ +PL
  KHJ30874.1 154 ---IASAKLSSGDAAEQRLKVEVMQLPRKDRQRLKQLSKNDD------DPEEIfsNIFGENRRPKSVPKLAEPfsasaggsfqmtNLDVEIRKRYVHPL 243
                 ...2345789***************************99866......33333445555555555554444446666666666669************* PP

   SAGA-Tad1 179 gsesgelpdtdsLrkRmekiaeeeGLvggvsadcaellnlaldvyLKnliescid 233
                 +sesge+pdt s+++Rm +i++e G+ +g++ d+ +++++a+++++K++++s++ 
  KHJ30874.1 244 ASESGEFPDTTSIESRMLPICYETGILSGHASDAPHFMSVATETFIKEVLSSIFT 298
                 ****************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3664.48
//
Query:       KHJ30875.1  [L=381]
Description: putative dimethyladenosine transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.3e-60  202.7   0.0    7.1e-60  202.3   0.0    1.1  1  RrnaAD           Ribosomal RNA adenine dimethylase
    1.1e-07   32.5   0.0    2.5e-07   31.3   0.0    1.6  1  Methyltransf_25  Methyltransferase domain
    2.1e-05   25.1   0.0    5.4e-05   23.8   0.0    1.7  1  Methyltransf_11  Methyltransferase domain
    0.00017   22.3   0.0     0.0004   21.1   0.0    1.6  1  Methyltransf_12  Methyltransferase domain
    0.00028   20.7   0.0    0.00058   19.7   0.0    1.5  1  Methyltransf_31  Methyltransferase domain
    0.00055   19.3   0.0    0.00092   18.6   0.0    1.2  1  CMAS             Mycolic acid cyclopropane synthetase
     0.0013   18.6   0.0     0.0024   17.7   0.0    1.4  1  Methyltransf_23  Methyltransferase domain
     0.0014   18.4   0.0     0.0025   17.6   0.0    1.4  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
     0.0032   17.0   0.0     0.0052   16.3   0.0    1.3  1  MTS              Methyltransferase small domain
     0.0082   15.8   0.0      0.015   14.9   0.0    1.3  1  NodS             Nodulation protein S (NodS)
  ------ inclusion threshold ------
      0.049   13.0   0.0      0.079   12.3   0.0    1.3  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
      0.099   12.5   0.0        0.2   11.5   0.0    1.5  1  PRMT5            PRMT5 arginine-N-methyltransferase
       0.14   11.8   0.0       0.27   10.8   0.0    1.4  1  Methyltransf_28  Putative S-adenosyl-L-methionine-dependent m


Domain annotation for each model (and alignments):
>> RrnaAD  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.3   0.0   5.1e-63   7.1e-60       2     224 ..      30     246 ..      29     275 .. 0.94

  Alignments for each domain:
  == domain 1  score: 202.3 bits;  conditional E-value: 5.1e-63
                 GCCXXGCG--EE--HHHHHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-SEEEEE-S-HHHHHHHHCHTT...TCCCEEEE-S-CCGHHHHHHHCTT CS
      RrnaAD   2 nklrksygqnflknkkvineIldklnleekltvleigpGkGilTeeLakrakqvvvlElderLakllqkkls...kdeklkvvhqDflkfetpeevtek 97 
                 +k++++ gq++lkn+ v++ I++k+ l++++tvle+gpG+G+lT ++++ a++v ++Eld+r+a++++k+++   ++++l+++  D+ k+e        
  KHJ30875.1  30 FKFNTNVGQHILKNPGVAEAIVSKAFLRPSDTVLEVGPGTGNLTMRILEKANKVIAVELDPRMAAEVTKRVQgkpEQNRLEILIGDVIKMESLPRF--- 125
                 799*********************************************************************999999************999933... PP

                 TCCCCEEEEEEE--TTTHHHHHHHHHHGGGGCEEEEEEEEEHHHHHHHH--TTSTT-SHHHHHHHHHEEEEEEEEC-GGCECS--SSSEEEEEEEE-SS CS
      RrnaAD  98 dsihqeflvvanlPyeistqlvkqlleesrfglvkmllwlqkefarrllarpgskkrsrlsvlreaftdvklvakveksifsPppkvdsalvelerkde 196
                         +++n+Py+is++lv++ll+++ ++ + ++l++q+efa rl+arpg+ +++rlsv+++++  v++++kv+k++f+Ppp+v+s++v++e+k  
  KHJ30875.1 126 ------DVCISNTPYQISSPLVFKLLSLPNPP-RVSILMFQREFALRLVARPGDPLYCRLSVNVQFWSKVTHIMKVGKNNFKPPPQVESSVVRIEPKMG 217
                 ......389**********************7.8899************************************************************** PP

                 -S.--S-HHHHHHHHHHHHCTTTSBCCCH CS
      RrnaAD 197 dl.pqkdlkkyesvvrkllnrkrktlsts 224
                 +  p  ++++++ ++r++++rk++t++++
  KHJ30875.1 218 SErPGMSWEEWDGMLRICFVRKNRTMRAN 246
                 999***********************998 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.0   1.8e-10   2.5e-07       1      73 [.      62     132 ..      62     145 .. 0.86

  Alignments for each domain:
  == domain 1  score: 31.3 bits;  conditional E-value: 1.8e-10
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHH..TTTTEEEEESBCCGBSSSTTTEEEEEEEST CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraee..eglnvefvqgdaedlpfedgsfDlvvssga 73 
                      vL++G GtG+lt++++++    kv++v+++++m +++ +r++   e+ ++e++ gd+ +++    +fD+++s+ +
       KHJ30875.1  62 VLEVGPGTGNLTMRILEKA--NKVIAVELDPRMAAEVTKRVQGkpEQNRLEILIGDVIKMESLP-RFDVCISN-T 132
                      9*****************6..9*******************8744444*********9998665.9*****95.3 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   3.9e-08   5.4e-05       1      68 [.      63     131 ..      63     141 .. 0.93

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 3.9e-08
                      EEET-TTSHHHHHHHHTTSEEEEEES-HHHHHHHHHHCCHHT-..EEEETTEECCCT.SS-TT-EEEEEEE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrgarvvgvDlskemlklakekaseegl..kvefvvadaekl.pfednsfDlvvss 68 
                      L+vG GtG l+  + +++ +v++v+l+++m + + ++++++++  ++e++ +d+ k+  ++   fD+++s+
       KHJ30875.1  63 LEVGPGTGNLTMRILEKANKVIAVELDPRMAAEVTKRVQGKPEqnRLEILIGDVIKMeSLPR--FDVCISN 131
                      89********************************99999999999***********966777..9999987 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   2.9e-07    0.0004       1      72 [.      63     130 ..      63     137 .. 0.83

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 2.9e-07
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvva 72 
                      Le+G GtG+l++++lek    ++++v+++p++ +   ++ + + ++n  ++e+   d+++ ++   fD+ ++
       KHJ30875.1  63 LEVGPGTGNLTMRILEK--ANKVIAVELDPRMAAEVTKRVQGKPEQN--RLEILIGDVIKMESLPRFDVCIS 130
                      8****************..**************88888887777654..77777777777776678888765 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   4.2e-07   0.00058       5      83 ..      60     133 ..      56     168 .. 0.84

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 4.2e-07
  Methyltransf_31   5 lrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgld.nveFeqgdieeleklledekfDlilsnev 83 
                       +vl++G GtG+lt ++ e+++   +v+ ++ ++++    +++ q +  + ++e  +gd+ ++e+l    +fD+ +sn +
       KHJ30875.1  60 DTVLEVGPGTGNLTMRILEKAN---KVIAVELDPRMAAEVTKRVQGKPEQnRLEILIGDVIKMESL---PRFDVCISNTP 133
                      689***************8876...5****************9998877779************86...68*****9944 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   6.7e-07   0.00092      53     130 ..      49     127 ..      46     132 .. 0.90

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 6.7e-07
                 HHHTTTT--TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHTS-SSS-EEEEES-GGG---..--SE CS
        CMAS  53 lileklelkpGmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakkrvdeldlerkvevklldyedlde..kvdr 130
                  i+ k+ l+p +t+L++G G G+l++r  e+   kv+++ l    a+ + krv+    +++ e+++ d   ++   ++d 
  KHJ30875.1  49 AIVSKAFLRPSDTVLEVGPGTGNLTMRILEK-ANKVIAVELDPRMAAEVTKRVQGKPEQNRLEILIGDVIKMESlpRFDV 127
                 6789999************************.89******************************9999888877667775 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.7e-06    0.0024      14      71 ..      52     107 ..      40     136 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.7e-06
  Methyltransf_23  14 erllpklraggrvLdiGcGtGillevlrengfsvtgvDlspeaveiaekakkaqkdqf 71 
                       +++  lr++  vL++G+GtG+l+  + e+  +v++v+l+p++ +++ k+ + +++q 
       KHJ30875.1  52 SKAF--LRPSDTVLEVGPGTGNLTMRILEKANKVIAVELDPRMAAEVTKRVQGKPEQN 107
                      4555..89999**********98888888888**********9999865555555554 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   1.8e-06    0.0025      68     132 ..      53     115 ..      15     127 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 1.8e-06
                 HTT--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHHHHHHCTTC.SEEEEES- CS
        PCMT  68 llelkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldle.nvivvvgD 132
                    l++ + vLevG G+G lt    r++++  +v+++e  +++++e +++++ +  + ++ + +gD
  KHJ30875.1  53 KAFLRPSDTVLEVGPGTGNLT---MRILEKANKVIAVELDPRMAAEVTKRVQGKPEQnRLEILIGD 115
                 445999************987...6999999********************976554378888888 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   3.8e-06    0.0052      31     108 ..      58     135 ..      30     144 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 3.8e-06
                 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.EEEEE-STTTTSTTS-EEEEEE---ST CS
         MTS  31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.vevvasdvleeveekkfdlivsNPPfh 108
                  s++vl +G G+G l++ ++++ +++  + +d   +A e++k+   + + + +e++  dv++  +  +fd+ +sN P++
  KHJ30875.1  58 PSDTVLEVGPGTGNLTMRILEKANKVIAVELDPR-MAAEVTKRVQGKPEQNrLEILIGDVIKMESLPRFDVCISNTPYQ 135
                 6788*****************9999655555554.455666555544444459********999999*********986 PP

>> NodS  Nodulation protein S (NodS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.1e-05     0.015      46     111 ..      61     129 ..      52     138 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.1e-05
        NodS  46 dalevGcaaGalterlapyckrltvvdvveeaiararervkessh...iswivsdvqqfstdekfdliv 111
                  +levG  +G lt r+   ++++  v++ ++  a   +rv+ +++   +  ++ dv ++++  +fd+ +
  KHJ30875.1  61 TVLEVGPGTGNLTMRILEKANKVIAVELDPRMAAEVTKRVQGKPEqnrLEILIGDVIKMESLPRFDVCI 129
                 69**************************************98776222667889************987 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   5.8e-05     0.079      46     110 ..      57     119 ..      24     129 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 5.8e-05
                      --TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSS.TEEEEE--TTT- CS
  Ubie_methyltran  46 krgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegki.nieflqanaeeL 110
                      +++ +vl+v  Gtg+l++++++++    kv+ +++++ m  +  k+++ +  + ++e l ++  ++
       KHJ30875.1  57 RPSDTVLEVGPGTGNLTMRILEKA---NKVIAVELDPRMAAEVTKRVQGKPEQnRLEILIGDVIKM 119
                      55669**************99876...589999**************9887665788888776655 PP

>> PRMT5  PRMT5 arginine-N-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00014       0.2      67     144 ..      61     131 ..      19     132 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00014
                 EEEEES-TTSHHHHHHHHHHHHHCCCEEEEEEEES-HHHHHHHHHHHHHHTTCCGCEEEES-CCCCCHCC-ECEEEE- CS
       PRMT5  67 vilvvGaGRGplvdralkaleetkvtkvkivavEKnpnavvtLqkkvneekWeekveviksdmrelkaeekvdllvsE 144
                 ++l vG G G l  r   +le+++    k++avE  p+    ++k+v+ +  ++++e++  d+ ++++  ++d+++s+
  KHJ30875.1  61 TVLEVGPGTGNLTMR---ILEKAN----KVIAVELDPRMAAEVTKRVQGKPEQNRLEILIGDVIKMESLPRFDVCISN 131
                 577789999988655...555666....89*******************9999***********************95 PP

>> Methyltransf_28  Putative S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0    0.0002      0.27      21      76 ..      61     106 ..      49     128 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.0002
  Methyltransf_28  21 rliElGpGkGtLmadvLrtlrkflpefyealeyhlvEaSpqlrerQknrLkekake 76 
                      +++E+GpG+G L   +L+  +k           + vE  p+++++  +r+++k ++
       KHJ30875.1  61 TVLEVGPGTGNLTMRILEKANKV----------IAVELDPRMAAEVTKRVQGKPEQ 106
                      799**********9999988766..........67888888888888888886544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       700  (0.0390429); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2777.91
//
Query:       KHJ30876.1  [L=908]
Description: putative spc97 spc98 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.2e-99  331.9   0.3    6.5e-99  331.3   0.3    1.3  1  GCP_C_terminal  Gamma tubulin complex component C-terminal
    8.5e-82  275.2   0.0    2.2e-81  273.9   0.0    1.7  2  GCP_N_terminal  Gamma tubulin complex component N-terminal
    0.00076   19.5   0.2     0.0021   18.1   0.2    1.7  1  DUF3921         Protein of unknown function (DUF3921)


Domain annotation for each model (and alignments):
>> GCP_C_terminal  Gamma tubulin complex component C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  331.3   0.3  1.1e-102   6.5e-99       1     309 []     530     885 ..     530     885 .. 0.97

  Alignments for each domain:
  == domain 1  score: 331.3 bits;  conditional E-value: 1.1e-102
  GCP_C_terminal   1 LlehLkllkrylLlgqgdFisrLldalfdelwkpasselrlaLtslLeeairssnaqqsdelkddlsfaldlpevleeldakldpdsle..gldf 93 
                     L+ehLk+lk+y+LlgqgdFi++L+++l+++l++pa++++r++Lt++Le+air+snaq+            d+pevl++lda++ ++s++  g+d+
      KHJ30876.1 530 LFEHLKALKNYILLGQGDFIALLMESLSSNLDRPAGAQYRHTLTAQLEHAIRGSNAQY------------DSPEVLRRLDARMLQLSHGdiGWDC 612
                     89******************************************************99............************************* PP

  GCP_C_terminal  94 ltLeYkvpwplslvitpealekYqriFrfLlrvkrvefalsslwkrrkatgarsvl..........lkrarllrqemlhfvsqlqyYvldevies 178
                     +tLeYkv++p+++++t++  ++Y+++F+fL+r+krvefalss+w r+++tg+r+vl          +k +r +++em+hf+ qlqyY+l+evies
      KHJ30876.1 613 FTLEYKVDAPVDVIVTEWGNRQYLKVFNFLWRIKRVEFALSSTW-RKCMTGSRGVLhgevksviqtWKLTRGVLAEMIHFIGQLQYYILFEVIES 706
                     ********************************************.********99999999999999999************************* PP

  GCP_C_terminal 179 sWreleekl.kkeatdldelieaHeafLdsilkkclLrskk.........kllklleeilelileFakvldgly.lsvselt............. 249
                     sW+el +++ k+ +t ld+li+aH+++L++i++k+l++ k+         +++++l eil+l+l++++++dgly +svs++              
      KHJ30876.1 707 SWDELYAEIhKDGCT-LDDLIKAHTKYLNAITHKGLIGAKRkyyddtddnTFMTQLGEILRLMLSYRDAVDGLYsWSVSDYIrrqgadvqrelfs 800
                     *********777788.************************6699*****999****************************88************* PP

  GCP_C_terminal 250 ..............................aeeaeeeeleekleerleelekeFrkkvslllkvlralkeqeededlrqLllrLdfnefY 309
                                                   +e   ++e+++ l+erl++l++ F+++v ll++ l a+  q+ d+d+r+L++ ++fn+fY
      KHJ30876.1 801 qreeddvlltpsitthrmtgkfsdvsplspTEYPISDEFPA-LQERLNSLRNHFKSRVCLLVGEL-AH--QP-DVDMRFLGVAMNFNDFY 885
                     ***************************99956666788899.9**********************.66..88.9***************9 PP

>> GCP_N_terminal  Gamma tubulin complex component N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  273.9   0.0   3.6e-85   2.2e-81       1     306 []     223     527 ..     223     527 .. 0.97
   2 ?   -2.2   0.1      0.43   2.6e+03      69     103 ..     549     585 ..     529     604 .. 0.69

  Alignments for each domain:
  == domain 1  score: 273.9 bits;  conditional E-value: 3.6e-85
  GCP_N_terminal   1 lrdllylLqGisgklirfdekddervvkdvrlpgllppslrslverllelgtlyrrlrkfveevsrsesglvlqalaaaldeelteyyrliaqlE 95 
                     lrd+ ++LqG++++ ++f e +       ++lp++lp ++ s++++l+e   lyr+l +f+++   s+ gl+ q+l+aal++el++y+ l+a+lE
      KHJ30876.1 223 LRDISFILQGLNSTNFTFVE-SR------LKLPKTLPVPILSVLHTLAEPSLLYRSLVSFIQS---SSAGLIGQSLRAALSTELRSYLGLVAVLE 307
                     89***************988.55......89******************************99...9**************************** PP

  GCP_N_terminal  96 sqlledsesi.............ltLlrlevwlqetllllrvLanlveevekanlkggallsllhe.aaqhgdpkvrkllsellervsrpfleml 176
                      q++++  si             +tL+rl+vw++e ++ lr+++ + ee++  n++gg+l+sl+h  ++ hgdp v  ++++ll +vsrpf++ml
      KHJ30876.1 308 GQIRSALFSIdekeprggigkvgVTLKRLVVWTREATMGLRLMSIISEESK--NKRGGQLISLIHGfSSAHGDPTVGAFAERLLTQVSRPFYDML 400
                     *******999*****************************************..*************8888************************* PP

  GCP_N_terminal 177 ekWileGelsDpynEfFveenesvakeklked.....dseklweekYtlrkemlPsflseelaekIletGkslnflrescgdsewiektes..ee 264
                     ++Wi++GelsDpy+E Fv+e++ +a e+++++      ++++w +kY+l+ +m+Ps++++++a+k++++Gkslnf+r  cgd++w+e ++s  ++
      KHJ30876.1 401 RHWIYDGELSDPYHESFVSEKDLHAVENQESRnrgggGASNVWGDKYKLNDDMVPSIITSDFAQKVFLIGKSLNFIRFGCGDAQWVE-RYSkaAS 494
                     ************************99999888*****************************************************99.6666999 PP

  GCP_N_terminal 265 keleyiddleelssslslsleelidsayklaskrllelLfke 306
                     kel+y+d++          le +id+ayk+++ rl++l+ ++
      KHJ30876.1 495 KELRYGDTAT---------LETWIDEAYKTTMARLIHLMAEK 527
                     *******666.........********************987 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.43
  GCP_N_terminal  69 sglvlqalaaaldee.lteyyrl.iaqlEsqlledse 103
                       l++++l++ ld+   ++y+    aqlE+ ++ +++
      KHJ30876.1 549 IALLMESLSSNLDRPaGAQYRHTlTAQLEHAIRGSNA 585
                     5677888888898664677766669999999987665 PP

>> DUF3921  Protein of unknown function (DUF3921)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.2   3.5e-07    0.0021       9      52 ..     700     743 ..     693     749 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 3.5e-07
     DUF3921   9 iqkaihrtydelGkeldlqGvvvdeiqkaqeeyLsaLsyetlid 52 
                 +   i   +del  e+   G   d++ ka   yL a+++  li 
  KHJ30876.1 700 LFEVIESSWDELYAEIHKDGCTLDDLIKAHTKYLNAITHKGLIG 743
                 55678899********************************9995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (908 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.46
# Mc/sec: 5944.77
//
Query:       KHJ30877.1  [L=293]
Description: putative yippee family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      7e-18   64.8   0.0    1.2e-17   64.1   0.0    1.4  1  Yippee-Mis18  Yippee zinc-binding/DNA-binding /Mis18, centrom
  ------ inclusion threshold ------
        4.2    7.4  14.1       0.17   11.9   4.5    2.5  2  PRIMA1        Proline-rich membrane anchor 1


Domain annotation for each model (and alignments):
>> Yippee-Mis18  Yippee zinc-binding/DNA-binding /Mis18, centromere assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.1   0.0   1.3e-21   1.2e-17       2     100 ..     104     225 ..     103     230 .. 0.93

  Alignments for each domain:
  == domain 1  score: 64.1 bits;  conditional E-value: 1.3e-21
                   EEEETTTS-EEEECCCEEEEECC...............................CEEEES---CCCEEEECEEEETTSTTEEEEEEEETTT--EEEE CS
  Yippee-Mis18   2 vfqCkkCktilgdslqlvsegra...............................lnivvlkkvtrnvvvgkelvtdeegkctystlsCkgCnsvlGw 67 
                   +++C kC+t+l++++q++s+g                                  n+ + ++++r++++g+++v+d         +sC  C++v+Gw
    KHJ30877.1 104 TLRCLKCSTDLAYTTQILSKGFTgrlgraflvapppqppfvpsfppkprpkaelVNTRIEQPMSRELITGWHVVAD---------VSCIVCATVVGW 191
                   799****************66656667779999999****************************************.........************ PP

                   EEEECSCC.CCCCCTCEEEEGGGEEEEESSSSXX CS
  Yippee-Mis18  68 kYksteee.lkykrglfiletkaitsyslgekee 100
                   kY +++e+ ++yk+g+ ile ++++++ ++e+ e
    KHJ30877.1 192 KYIEAREDsQRYKVGKVILERERVCVSGTWEDIE 225
                   ***************************9999866 PP

>> PRIMA1  Proline-rich membrane anchor 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   2.1     0.068   6.1e+02      19      45 ..      34      59 ..      22      90 .. 0.67
   2 ?   11.9   4.5   1.9e-05      0.17      25      73 ..     139     189 ..     131     194 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.068
      PRIMA1 19 eacqcrrypplpppppppppprllslt 45
                 ++ c ++  +p+p+ p  +p   s+t
  KHJ30877.1 34 LNSSCHSTSSFPSPSTPNTTPI-SSAT 59
                4556777778888887777763.2333 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 1.9e-05
      PRIMA1  25 rypplpp..pppppppprllsltaaestvsplepwwselviiiavvcaslv 73 
                 ++pp+ p  pp+p p  +l+ + + ++++ +l + w+ +  + ++vca++v
  KHJ30877.1 139 PQPPFVPsfPPKPRPKAELVNTRIEQPMSRELITGWHVVADVSCIVCATVV 189
                 45665553456666667789999999*****9999999999********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       754  (0.0420548); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2076.08
//
Query:       KHJ30878.1  [L=160]
Description: hypothetical protein EV44_g3203 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       136  (0.00758548); expected 358.6 (0.02)
Passed bias filter:                      112  (0.00624686); expected 358.6 (0.02)
Passed Vit filter:                         3  (0.000167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 1183.37
//
Query:       KHJ30879.1  [L=496]
Description: putative succinate-semialdehyde dehydrogenase nadp+ [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.4e-163  543.5   0.4   3.8e-163  543.3   0.4    1.0  1  Aldedh    Aldehyde dehydrogenase family


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  543.3   0.4  2.1e-167  3.8e-163       1     461 [.      25     486 ..      25     487 .. 0.98

  Alignments for each domain:
  == domain 1  score: 543.3 bits;  conditional E-value: 2.1e-167
                 EET-SS.SEEEEEETTTCEEEEEEE-B-HHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTHHHHHHHHHHHH---HHHHHHHHHHHHHHHH CS
      Aldedh   1 wveses.etievinPatgeviakvpaataedvdaavaaAkeafkawaklpaeeRaeiLrkaadlleerkeelaeletletGkplaearaeveeaidvlr 98 
                 wv+s+s +t++v++Pa+g+ i++vp+ ++ed +aa++aA++a +++++ + +eR++iLrk+ dl+ e++ ++a+++tle+Gkplaea++ev++a+++l+
  KHJ30879.1  25 WVSSKSgKTFNVFDPASGNLIGQVPEFDKEDTEAAIKAAADALPTFRAKTGRERSKILRKWYDLMVENASDIAQIITLENGKPLAEASGEVAYAANFLE 123
                 999999777****************************************************************************************** PP

                 HHHHHHHHHSEEEEEEC.TTEEEEEEEEE-SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHTTS-TTSEEE-..-SSTC CS
      Aldedh  99 yyaelaeklegevlpss.egklalvrrePlGvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeeaglPkgvlnvv..tgsgs 194
                 ++ e+a + +g+++p s +g+++ v++eP+Gv+g+ItPWNfP++++++k+ pala G+tvv K   etpl+al+l+el ++ag+Pkgv+nv+    + s
  KHJ30879.1 124 WFSEEAPRAYGDTIPASfTGNMIAVVKEPVGVCGLITPWNFPAAMLTRKIGPALASGCTVVAKSPGETPLTALALVELGRRAGIPKGVFNVIsaLENTS 222
                 ****************66**************************************************************************4434578 PP

                 CHHHHHHH-TTESEEEEES-HHHHHHHHHHHHCTTSEEEEEE---EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHH CS
      Aldedh 195 evgealvehpevdkvsftGstevgrkiakaaaknlkrvtlElGGknplivledaDldkaveaivkgafgnaGQvCiaasrllvqesiydefveklveaa 293
                  vge+++++  ++kvsftGst+vg+ ++k++++ lk+++lElGG++p+iv+ daD+d av+++v + f+++GQ+C++a+r+++++siyd f  kl++++
  KHJ30879.1 223 IVGETITTSSIIRKVSFTGSTSVGKLLMKQCSSGLKKLSLELGGNAPFIVFGDADIDLAVAGAVSSKFRSSGQTCVCANRIFIHSSIYDSFAVKLAAKV 321
                 8************************************************************************************************** PP

                 HT--BS-TTSTT-SB---SSHHHHHHHHHHHHHHHHTTSEEEE-TTE.SB-SSST.TEE--EEEES-TTTSHHHHS---SSEEEEEEESSHHHHHHHHH CS
      Aldedh 294 kklkvgdpldedtdvGPliseaqlekvekyveeakeegaklllGgereeaglekg.yfvePtvlanvtpdmriaqeEiFGPVlsvikfkdeeeaieiaN 391
                 +++ vg ++++ ++ GPli+e++++kve++v +a+++ga+++ Gg   ++  e g +f+ePtv++++t++m +a eE+FGPV++++kf++e+ +++iaN
  KHJ30879.1 322 AQFHVGGGFTKGVTHGPLIHEKAVAKVEAHVRDAEKKGATIIQGG---RQMSELGpNFYEPTVITGMTSNMILASEETFGPVAALFKFDSEDLVVKIAN 417
                 *********************************************...44555555******************************************* PP

                 SSSEESEEEEE-SBHHHHHHHHHHS-SSEEEESSSST--TTTSEB--CGGGEES-BSHHHHHHHTEEEEE CS
      Aldedh 392 dteyGLaagvftkdleraervaerleaGnvyiNdsttgaaealpfgGvkqSglGreggkegleeytevkt 461
                 ++++GLaa++ftkdl+ra+rv++++++G+v+iN+ + +++++ pfgGvk+Sg+Greg+k+g+eey  +kt
  KHJ30879.1 418 SSPVGLAAYIFTKDLQRAMRVSNAMDVGMVGINTGIISDPCS-PFGGVKESGFGREGSKYGMEEYQVIKT 486
                 ******************************************.**********************99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 3285.42
//
Query:       KHJ30880.1  [L=530]
Description: putative maltose permease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-68  231.4  23.8    2.3e-68  231.1  23.8    1.1  1  Sugar_tr  Sugar (and other) transporter
    1.5e-05   24.1  46.6     0.0011   18.0  36.2    3.0  3  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.1  23.8   2.6e-72   2.3e-68       2     452 .]      73     515 ..      72     515 .. 0.94

  Alignments for each domain:
  == domain 1  score: 231.1 bits;  conditional E-value: 2.6e-72
                 HHHHHHHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTS CS
    Sugar_tr   2 alvaalggllfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgkn 100
                 +    ++ ++ gYd    + +l++++f  ++g   +++ +  s +++  +++ +l+G ++G++ ag+ ++rfG k       +++ +g +lq++++   
  KHJ30880.1  73 CAYSLFTCVMWGYDGLASNIVLSIPQFRQDYGKPFKDQYTI-SPLWQLGLAGGTLFGLLFGGVSAGITAKRFGCKI------LFSTAGVFLQYFSP--G 162
                 555678889*****************888888888887776.688999999**********************885......56778999******..6 PP

                 S-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS---HHHHH CS
    Sugar_tr 101 svevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllflPESPrylv 199
                 ++ +l+ g++l+Gi++G++ +++P y++EiAp +lRga++   +++i+fG+ +a+++   ++++ ++  ++ l+++q+ +  + l++l++lPESP+ylv
  KHJ30880.1 163 NLPLLLGGKILTGIPLGVFITIAPPYCAEIAPLALRGAVTAAVNWSIVFGQCLAYVVLQQTQYIPGKGSYQTLFAVQWPFVAFALLFLHWLPESPYYLV 261
                 7************************************************************************************************** PP

                 HTT-HHHHHHHHHH.HHHCHHHHHHHHHHHHHHHHHHH......HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THH..HHHHH CS
    Sugar_tr 200 ekgkeeeakevlak.lrgeedadrelaeekdsleaeqeee.kaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsks..llvti 294
                 ++g+ ++a+++ ++  +++ d++ ++a ++  le + +++ +as+k+ ++  t+r r++i+  + ++q ++Gi  i+ y  ++++  gl+ +  + +t+
  KHJ30880.1 262 QRGQVSRARKSCYRlHDNKFDVEGYIASIQIDLETTLRTQaEASYKQCFQG-TNRIRTFIATSTFFIQSVSGISWIIGYMAYFLQLGGLTVPqsFNATV 359
                 **************445569****************99999**********.66*******************************999988778***** PP

                 HHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHH CS
    Sugar_tr 295 ivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilgivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaiava 393
                 +++++  +  +v++++++ fGRR++ l G++  ++ ++++g ++ l++ +      + ++f+ ++ +l++l++g+v w l+sE++ +s+R+ ++a+a++
  KHJ30880.1 360 GLSFLSLFGNMVGWYVIEAFGRRKTALYGSISLTLSLFMIG-ITSLIRGGI----WAQVFFMGVWSFLYQLTIGSVAWPLISEISKSSLRGHTQALATV 453
                 ****************************************9.888888883....445567778999******************************** PP

                 HHHHHHHHHHHHHHHHHCHHH...T-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGGT CS
    Sugar_tr 394 vnwlanflisllfpiiteaig...ggyvflvfaglavlfiifvfffvpetkgrtleeieelf 452
                 ++ ++  + ++l p++++  +   gg+v++v++ ++ +++i +++ +petkgrt+ ei++lf
  KHJ30880.1 454 TQGVVGAVGGVLLPFAVNPDSgnlGGKVGFVYGTILGFSCIGIWWWYPETKGRTFAEIDRLF 515
                 ****************986666778**********************************997 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.7   2.1e-06     0.018     193     286 ..      52     156 ..      28     160 .. 0.70
   2 !   18.0  36.2   1.2e-07    0.0011      71     352 ..     148     462 ..     136     463 .. 0.70
   3 !    3.4  28.3    0.0034        30      22     176 ..     339     504 ..     318     513 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.1e-06
       MFS_1 193 paplvpawkallkdpvlwillialllfffgfsg.......lltllplylqevlgls........glllaglllallalvgail.allagrlsdrlgrrr 275
                  a+l + wk+ l++++  ++++a  lf+++++g       ++  +p + ++++g +         l+++g  la + l+g+ + ++ ag  ++r+g   
  KHJ30880.1  52 TAQLNETWKEALRKNPKALMWCAYSLFTCVMWGydglasnIVLSIPQF-RQDYGKPfkdqytisPLWQLG--LAGGTLFGLLFgGVSAGITAKRFGC-- 145
                 444555788888888654467777777667777778***********8.999999988888888888888..5555555544436777777799998.. PP

       MFS_1 276 rlllallllll 286
                  +l++ ++++l
  KHJ30880.1 146 KILFSTAGVFL 156
                 66666666655 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 1.2e-07
       MFS_1  71 lfalglllll.fa.sslwlllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllgg...llasslgWravfyilaivslla 164
                 lf+ ++++l  f+  +l+lll + +l+G+  g++++++  + a+++p   rg +++ ++ ++ +G  l++++     ++   ++++ +f +  ++ ++a
  KHJ30880.1 148 LFSTAGVFLQyFSpGNLPLLLGGKILTGIPLGVFITIAPPYCAEIAPLALRGAVTAAVNWSIVFGQCLAYVVLQqtqYIPGKGSYQTLFAVQWPFVAFA 246
                 333333555556656777************************************************888777666778889999**************9 PP

       MFS_1 165 fvlfllllpeepperkrkspkeee.............................kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplyl 234
                 ++ fl +lpe+p       ++ +                                   +++   +k+ +        +ia  +ff+   +  +++  y+
  KHJ30880.1 247 LL-FLHWLPESPYYLVQRGQVSRArkscyrlhdnkfdvegyiasiqidlettlR----TQAEASYKQCFQGTNRIRTFIATSTFFIQSVSGISWIIGYM 340
                 66.667777777666666555555788999999999999999988777744332....22222333333333222255555555444444444444444 PP

       MFS_1 235 qevlgls........glllaglllallalvgailallagrls.drlgrrrrlllallllllaalglallavtssavllllvlvl..iGf.glgfvfpsl 321
                    l l+        +  ++g  l++l+l+g     ++g+++   +grr++ l + ++l+l+++++ +++++   +++ + +++  ++f  + ++ + +
  KHJ30880.1 341 AYFLQLGgltvpqsfN-ATVG--LSFLSLFG---N-MVGWYViEAFGRRKTALYGSISLTLSLFMIGITSLIRGGIWAQV-FFMgvWSFlYQLTIGSVA 431
                 4444444333543222.4444..55555554...4.666666699***************************44444433.333347775555559999 PP

       MFS_1 322 lalasdlappeeagtasglfntagslggalg 352
                 + l+s+    + +g+ ++l++++++++ga+g
  KHJ30880.1 432 WPLISEISKSSLRGHTQALATVTQGVVGAVG 462
                 999999999999***************9998 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.0034
       MFS_1  22 alaedlgispse..igl.lltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa....sslw.lllvlrvlqGlgagalfpagaaliad 112
                 ++a  l++ + +  +++ ++++ +++++++++++ ++++ fGrr++ l g +++ l+l+++ ++     ++w  ++++ v + l + ++ +++  li++
  KHJ30880.1 339 YMAYFLQLGGLTvpQSFnATVGLSFLSLFGNMVGWYVIEAFGRRKTALYGSISLTLSLFMIGITslirGGIWaQVFFMGVWSFLYQLTIGSVAWPLISE 437
                 333333322222122332555678889******************999999999999555554335577788777777777777778888888889999 PP

       MFS_1 113 wfpkeergraigllsagfslGailgpllgglla.sslg.....Wravfyilaivsllafvlfllllpeep 176
                 +++ + rg   +l++++ ++  ++g +l ++ +    g        v+  + ++s+++++   +++pe++
  KHJ30880.1 438 ISKSSLRGHTQALATVTQGVVGAVGGVLLPFAVnPDSGnlggkVGFVYGTILGFSCIGIW---WWYPETK 504
                 999999999999999999999999999999888655557875555555555555555555...7777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       693  (0.0386525); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 3819.86
//
Query:       KHJ30881.1  [L=962]
Description: putative pseudouridine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-72  243.7   0.0    1.2e-66  225.3   0.0    4.0  3  TruD      tRNA pseudouridine synthase D (TruD)


Domain annotation for each model (and alignments):
>> TruD  tRNA pseudouridine synthase D (TruD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0   6.8e-05       1.2       2      33 ..      65      97 ..      64     111 .. 0.82
   2 !  225.3   0.0   6.6e-71   1.2e-66      40     387 ..     293     701 ..     267     719 .. 0.83
   3 !    4.8   0.0   0.00058        10     393     416 .]     922     945 ..     871     945 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 6.8e-05
        TruD  2 lgielyvtdte.gigGrlrespeDFiVeEieef 33
                +gi  yv +t  g++G +++++ DFiV+Ei+  
  KHJ30881.1 65 VGIYQYVNQTRvGFNGIFKKRYTDFIVNEIALD 97
                6888899887559*****************654 PP

  == domain 2  score: 225.3 bits;  conditional E-value: 6.6e-71
        TruD  40 degeylvlrvekrnwdtldlvrelaralgisrkrvgfaGtKDkrAvTtQlisirkvepeeleal..eikdvelevvgrarrklrlGdLaGNkFeirvrd 136
                   geyl + + k+++dt+++++ lar+l+++ + +++aGtKD+rAvTtQ is +++++++++++  +i + ++ ++  ++ +l+lG+L+GN F+i++rd
  KHJ30881.1 293 LGGEYLHMCLCKQDRDTMEVISYLARQLKVKPQIFSYAGTKDRRAVTTQRISAYRLTASTVAKIngQIYNSTVGNFKYEKSPLELGELKGNLFTITLRD 391
                 469************************************************************9999******************************** PP

        TruD 137 v.aeee..........eaakraeeileeleekggvPNyfGvQRFGsrrpvthlvGkaivkgdleeAvelyvgkp.....feeesedtreareav..... 214
                 +   ++          +a+++++   ++l+   g+ Ny+G+QRFG+    th++Gk i+kgd+ +Av++++ ++     f ee ++++   +++     
  KHJ30881.1 392 CrFVHDdpihvtqrckKAQEALDTACKTLASS-GFINYYGLQRFGTFDIGTHTIGKFILKGDYGRAVASILRTSpdawcFAEEGHESQCSGSKIgrdel 489
                 97444457877755555555555555556655.5**********************************9997652222244555555554444477777 PP

        TruD 215 ..........aetgdleealeelpkslryErallkrLae.kpkdykkAlealpknLqrlFvhAyqSylFNrvlseRlerglpldepveGDvvifaeer. 301
                             +  l+eal +lpk+++ Er++l++L++ +++dy +Al ++p+nL+ ++vhAyqSy++N+v+seR +r+   +++++GD+v+ ++++ 
  KHJ30881.1 490 draqairgfgLGELKLDEALAKLPKRFNAERSILHHLRSrNGNDYLGALLSIPRNLRLMYVHAYQSYVWNKVVSERWARY--SNKVITGDLVLIENKSk 586
                 988888888777999**********************9978999***********************************9..68*********999889 PP

        TruD 302 ................lpdtdrlqlvteknveevkrl....iergraf...vtaplvGtetelaegevgeierevleee...gleledFklpklpelss 374
                                 +p  +++ +++e+  ++++ l    +e g+++   +++pl+G ++e ++ + ge+ ++ +++e   +l++++ + ++  ++s 
  KHJ30881.1 587 nflehdqydecgevivRPAAHDTAIARENIFDRARALtteeVECGNFSisdIVLPLPGFDVEYPANDIGEFYKTFMASEeggELDPANMRRKQ-RDFSL 684
                 ***************977777777777776666654311113334433223789*********************998744459999999666.8**** PP

        TruD 375 kGtrRaillrve....d 387
                 +G++R+++ +v+    +
  KHJ30881.1 685 SGSYRKLIATVNnigfK 701
                 ********999855442 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.00058
        TruD 393 eedeltleFsLpkGsYATvvlrEi 416
                  + ++++ F+L + +YAT++lrE+
  KHJ30881.1 922 AKLGIIIWFELSSSQYATMLLREL 945
                 34568999**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (962 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       624  (0.0348039); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.22s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 6618.34
//
Query:       KHJ30882.1  [L=890]
Description: putative atp-dependent rna helicase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.2e-16   58.1   0.1      4e-15   56.0   0.0    2.1  2  HA2          Helicase associated domain (HA2)
    7.9e-15   55.2   0.2    3.6e-14   53.0   0.0    2.2  2  Helicase_C   Helicase conserved C-terminal domain
    3.5e-10   40.1   0.5      1e-09   38.6   0.1    2.1  2  OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fol
    5.4e-06   26.3   0.1    1.7e-05   24.6   0.1    1.9  1  DEAD         DEAD/DEAH box helicase
    0.00064   20.0   0.0      0.022   15.0   0.0    2.6  2  AAA_22       AAA domain
  ------ inclusion threshold ------
      0.011   16.0   0.1      0.042   14.2   0.0    2.0  2  AAA_19       AAA domain
      0.043   13.6   0.0        0.1   12.4   0.0    1.5  1  AAA_29       P-loop containing region of AAA domain


Domain annotation for each model (and alignments):
>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.0   1.6e-18     4e-15       1     107 [.     651     743 ..     651     773 .. 0.79
   2 ?   -3.8   0.0       6.1   1.6e+04      14      36 ..     833     856 ..     826     861 .. 0.70

  Alignments for each domain:
  == domain 1  score: 56.0 bits;  conditional E-value: 1.6e-18
         HA2   1 AlelLvalgALdeegnlTelGrkmaelPlsprlakmLlaaaeleegcldevitivAalsv.eeifleeneeekeeeee.........eeekakkkrkee 89 
                 Al +L+ +gALd++g+lTe+G k+a+lPl+ +++++L a  + ee ++ ++i+i+A l++ +e+f+++++ee++e+ e         +           
  KHJ30882.1 651 ALIRLHLIGALDNNGDLTEIGGKIARLPLPASYGRVLTAMENKEETLILYIIDIIASLTTdTEVFIQPKTEEERESMEefrkdiyhrQ----------- 738
                 6778*******************************************************879*******9987776654444444430........... PP

         HA2  90 ekarrklahkdaegDhlt 107
                              gD+lt
  KHJ30882.1 739 -------------GDILT 743
                 .............33333 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 6.1
         HA2  14 egnlTelGrkmae.lPlsprlakm 36 
                  + +T+ G+++ +  P s+ ++k 
  KHJ30882.1 833 GNYITTEGKHIITiHPSSVLYGKK 856
                 377999999988734777777765 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.0   0.0   1.4e-17   3.6e-14      13     109 ..     464     588 ..     452     590 .. 0.80
   2 ?   -2.2   0.1       2.1   5.3e+03      14      35 ..     736     762 ..     720     785 .. 0.55

  Alignments for each domain:
  == domain 1  score: 53.0 bits;  conditional E-value: 1.4e-17
                 TTTTSEEEEEESSHHHHHH.........HHHHHHHT......TSTEEEESTTSTHHHHHHHHHHHH.TTSSSEEEESGGGTSSSTSTTESEEEESSSS. CS
  Helicase_C  13 eeeggkilifvntidrlek.........vklllekk......gikvavlhgelpqnereeileqfn.kgesdvLiatdvaerGidipkvnlVinfdlp. 94 
                 e   g+il+f++ ++++e+                +       +k+++lhg+l+++ ++e +++ + k ++++++at++ae+++++p+v++V++++   
  KHJ30882.1 464 EPLPGDILVFLTGQEEIESlqtelenysQ------QlvktlpRMKIIPLHGSLSAQAQQEGFKKTKeKFTRKIVLATNIAETSVTVPGVRYVVDCGKSk 556
                 555789*********88666444422322......14555679**********************9556666*************************96 PP

                 .SSH................HHHHHHHTTSSS CS
  Helicase_C  95 .rnv................tsyiqriGRtgR 109
                  +++                 s+iqr+GR+gR
  KHJ30882.1 557 vKQYrprlglesllikpiskVSAIQRAGRAGR 588
                 63336688888999999999***********9 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 2.1
                 TTTSEEEEEESSHHHHHH.....HHHH CS
  Helicase_C  14 eeggkilifvntidrlek.....vkll 35 
                 +++g+il  ++ti+r         ++ 
  KHJ30882.1 736 HRQGDILTLLQTIQRYAAeetdrSEWC 762
                 677788888888884322223334444 PP

>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0         7   1.8e+04      43      61 ..     522     540 ..     519     550 .. 0.75
   2 !   38.6   0.1   3.9e-13     1e-09       2      78 ..     815     886 ..     814     889 .. 0.92

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 7
                  T...TSSSEEEEEEEEESS CS
  OB_NTP_bind  43 nekekepewvvytelvett 61 
                  ++++++ + v+ t++ et+
   KHJ30882.1 522 TKEKFTRKIVLATNIAETS 540
                  5677888899999998886 PP

  == domain 2  score: 38.6 bits;  conditional E-value: 3.9e-13
                  HHHHHHHHTTCEEEEEETTCCEEETTTCEEEEE-TTSTTTTT...TSSSEEEEEEEEESSSEEEEEEEEE-HHHHHH CS
  OB_NTP_bind   2 raillaGlypqiarkdpskkdyktartktrvfihpsSvlaknekekepewvvytelvettklylrdltaidpawLll 78 
                   ++ l+++  + a ++p+++ y t+ +k  + ihpsSvl      k+ e +++ e v t+k y+r ++ai++ w+++
   KHJ30882.1 815 LKSFLIAFATNTALMAPNGN-YITTEGKHIITIHPSSVLYG----KKLEAIMFLEHVFTAKSYARRVSAIEAPWIVQ 886
                  68899**************9.666668*************8....****************************9975 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.1   6.8e-09   1.7e-05       7     173 ..     151     333 ..     146     336 .. 0.68

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 6.8e-09
                 HHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS..............TTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.STSEEEEEETTSSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx RF
        DEAD   7 aiplilgggdvlvaaeTGsGKTlaflipvlqivyet..............kgktgpkalivePtreLaeqtlnnlkkfkky.idlrvlliiggvaardq 90 
                 +++ + +++ +l++++TGsGK++     ++++ + +              +++ g  + +  P r  a   ++++   +   ++ + +   g v ++  
  KHJ30882.1 151 ICNSLQENDILLLKGDTGSGKSTQVPQFLCSQTWCKprkvkikinqqisnTRTVGGIIAVTQPRRVAAITLAHRVAHEMGStLERNKHKSAGLVGYSVR 249
                 5556666666779********988655555444444577777777666554555567778889987776666666444443244333344454444444 PP

                 HHHHH.TTCSEEEEEHHHHHH.HHHCTSSHCTTEEEEEEETHHHHHHT..TTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS.HHH CS
                 xxxxx.xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxx RF
        DEAD  91 lskld.ngvdivvgtpgrldd.llstgklnlsqvrflVlDEadrlldq..gfsdfinrilnqlpqitcdgklqrqvivlSATlp.kdv 173
                  +k   +g++i + t g l++ +l++   nl+q + +++DE+++ + +      f++ i++  ++     +l+  v+++SATl  k++
  KHJ30882.1 250 FDKYIpAGMKIKFVTEGTLLQeMLQDP--NLKQYSAIIVDEIHERSVDvdLIVGFLKGIVHGDKNGRGGVPLK--VVIMSATLDlKEI 333
                 54443389*************566655..5*************988886567777788777777667777766..********97776 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   8.7e-06     0.022       5     103 ..     158     292 ..     154     329 .. 0.79
   2 ?    1.7   0.0      0.11   2.8e+02     111     130 ..     415     432 ..     409     436 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 8.7e-06
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaee.........erpevv....fvtlpsstsskdllrellralglelka.................... 70 
                   il++ G +G+GK+t + ++l +   + k+++          + ++v     vt p      +l++++++++g+ l++                    
  KHJ30882.1 158 NDILLLKGDTGSGKSTQVPQFLCSQ-TWCKPRKvkikinqqiSNTRTVggiiAVTQPRRVAAITLAHRVAHEMGSTLERnkhksaglvgysvrfdkyip 255
                 5799******************996.68888889********88888888456666666699999*********9999999****************** PP

      AAA_22  71 .....erlsseell.ealeqalraravielliiDEaqhl 103
                      +  ++  ll e+l++   +++   ++i+DE++  
  KHJ30882.1 256 agmkiKFVTEGTLLqEMLQDPNLKQYS--AIIVDEIHER 292
                 ****99999999997777777777777..*******985 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.11
      AAA_22 111 eLrsllnlsrkgvqliLvGt 130
                 +L++l++  + g+++iLvG 
  KHJ30882.1 415 DLKDLSD--ENGISIILVGG 432
                 799****..*********96 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   1.6e-05     0.042       8     126 ..     156     307 ..     148     313 .. 0.71
   2 ?   -3.2   0.0       3.7   9.5e+03      65      92 ..     839     864 ..     811     880 .. 0.61

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.6e-05
      AAA_19   8 lkekvllvtaGpGtGKTrvlkhivallvelggvkp.......................eeillvaftgrAakelrerlaalgaeatTiHrlal...... 77 
                  ++++ll+ +  G+GK++ + + +    + + +k+                       ++++++++++r a+e+   l+  +++   + + ++      
  KHJ30882.1 156 QENDILLLKGDTGSGKSTQVPQFLCSQTWCKPRKVkikinqqisntrtvggiiavtqpRRVAAITLAHRVAHEMGSTLERNKHKSAGLVGYSVrfdkyi 254
                 567888999999999999999888777777766667799999999999999999999999999999999999999999666666555555533666666 PP

      AAA_19  78 .....ldfddlltealelleeaeeekklqeee.llivDEfqd..vd.elqyrLlkall 126
                      ++f +    + +ll+e  ++ +l +++ ++ivDE+ +  vd +l++ +lk ++
  KHJ30882.1 255 pagmkIKFVT----EGTLLQEMLQDPNL-KQYsAIIVDEIHErsVDvDLIVGFLKGIV 307
                 6443333333....33334465667888.6666******9753366667777776665 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 3.7
      AAA_19  65 lgaeatTiHrlalldfddlltealelle 92 
                  g+++ TiH  ++l  ++l+  a  +le
  KHJ30882.1 839 EGKHIITIHPSSVLYGKKLE--AIMFLE 864
                 34458999988766555555..666776 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     4e-05       0.1      19      37 ..     155     173 ..     141     179 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4e-05
      AAA_29  19 idlkgatlltGpsGsGKST 37 
                 ++++++ ll G++GsGKST
  KHJ30882.1 155 LQENDILLLKGDTGSGKST 173
                 5666799***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (890 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       665  (0.0370907); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.42
# Mc/sec: 6327.64
//
Query:       KHJ30883.1  [L=154]
Description: putative cytochrome-c oxidase assembly protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-57  191.7   0.0      8e-57  191.5   0.0    1.0  1  CtaG_Cox11  Cytochrome c oxidase assembly protein CtaG/Cox11


Domain annotation for each model (and alignments):
>> CtaG_Cox11  Cytochrome c oxidase assembly protein CtaG/Cox11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.5   0.0   4.5e-61     8e-57       7     151 .]       1     153 [.       1     153 [. 0.89

  Alignments for each domain:
  == domain 1  score: 191.5 bits;  conditional E-value: 4.5e-61
  CtaG_Cox11   7 vfCeatGlggktekaaae.........ksaavkvdeertevtveFdadvseklpwefkpeqrslevkpGetalafytaknksdkpiigqavysvaPeea 96 
                 ++C++tG+gg++ k+  +         +++ + v++++ +++v+F+++vs+ lpw+f p+qr+++v pGetalafyta+n+s+++iig+a+ysv+P+++
  KHJ30883.1   1 MICQTTGWGGQPIKSPGHsgasegrdsSERLRPVTSAK-RIRVTFNGSVSDVLPWKFVPQQREVKVLPGETALAFYTATNRSSDDIIGVATYSVTPAQV 98 
                 79*********996554444333333222255566666.7*********************************************************** PP

  CtaG_Cox11  97 akyfnKieCFCFeeqkLkpgeevdlpvlFfidpelaedpelkkvkeitLsYtffe 151
                 a yf+Ki+CFCFeeq+L++ge+vd+pv+F+idp++ +dp++k ++++tLsYtff+
  KHJ30883.1  99 APYFSKIQCFCFEEQRLNAGETVDMPVFFYIDPDFVNDPNMKGIEQVTLSYTFFS 153
                 *****************************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       318  (0.0177366); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1173.39
//
Query:       KHJ30884.1  [L=371]
Description: putative glycosyl hydrolase family 16 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.9e-41  140.4   0.6    3.9e-41  140.4   0.6    1.6  2  Glyco_hydro_16  Glycosyl hydrolases family 16


Domain annotation for each model (and alignments):
>> Glyco_hydro_16  Glycosyl hydrolases family 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.4   0.6   2.2e-45   3.9e-41      15     176 ..      63     220 ..      49     221 .. 0.93
   2 ?   -2.0   0.0      0.12   2.1e+03      48      65 ..     248     265 ..     225     285 .. 0.61

  Alignments for each domain:
  == domain 1  score: 140.4 bits;  conditional E-value: 2.2e-45
                     EEETTSEEEEEEEEEE.EEEEEECCEESSEEEEEEEE---STTEEEEEEEETGGTSTTEEEEEEEETT-TTEEEEEEEBTTBSGE..EEEEETSS CS
  Glyco_hydro_16  15 svengetltltldkes.gsrikskksflyGkvearikaaksaGvvtafylssedekahdEiDiEflGndtgkvqtnvygkGkgkr..ekrlslwf 106
                     +++  +++ l+++k+  +++++s +++++Gkv++++k+a + G+v++++l+s   ++ dEiD+E+lG +++++q+n++gkG++++  +  ++ + 
      KHJ30884.1  63 KYDA-NGVHLSVTKSGdAPQLNSLFYIMFGKVSITMKTAPGVGIVSSLVLQS---DTLDEIDMEWLGARSSDMQSNYFGKGDTTTydRGAFHAVP 153
                     3444.489******998**********************************9...9****************************8788899999* PP

                     -TTTS-EEEEEEEETTEEEEEETTEEEEEEESSHHHHT.--EESEEEEEEEEEEBSHHHSSE-EEEEEEE CS
  Glyco_hydro_16 107 dptedfHtYaieWtpdkikfyVDgkpvrtltkkeaeevkyPqftpmkvavslwpgsdwateqgkvkidwa 176
                     + ++ f+tY++eWt+++i ++++gk vr lt ++a e++yPq tpm+v+++ w g+d  ++ g  +i wa
      KHJ30884.1 154 NHQNRFNTYTVEWTSSQIAWSINGKIVRILTPSTAAENQYPQ-TPMQVKFGAWSGGDPVNSPG--TISWA 220
                     *********************************99999****.********************..99998 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.12
                     EEE---STTEEEEEEEET CS
  Glyco_hydro_16  48 rikaaksaGvvtafylss 65 
                     + k ++++G + ++    
      KHJ30884.1 248 QYKYGDQSGSWNSISSVG 265
                     445566666666665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      262  (0.0146132); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2660.08
//
Query:       KHJ30885.1  [L=109]
Description: putative acn9 family domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.7e-20   71.9   0.1    6.9e-20   71.6   0.1    1.1  1  Complex1_LYR_2  Complex1_LYR-like
      1e-10   41.5   0.1    1.7e-10   40.7   0.1    1.3  1  Complex1_LYR    Complex 1 protein (LYR family)
  ------ inclusion threshold ------
      0.018   14.8   0.7      0.034   13.9   0.2    1.7  1  DUF4028         Protein of unknown function (DUF4028)


Domain annotation for each model (and alignments):
>> Complex1_LYR_2  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.6   0.1   1.1e-23   6.9e-20       2      60 ..      31      90 ..      30     106 .. 0.91

  Alignments for each domain:
  == domain 1  score: 71.6 bits;  conditional E-value: 1.1e-23
  Complex1_LYR_2  2 lsLYrrllrelrel.ppelrslgdayvraefrrhkhlknpeeialflknqreYaellery 60
                    + LYrr+lr +r+  p+++r lgd+yv++efr+hk+++np +i++flk++++Ya+ le  
      KHJ30885.1 31 IPLYRRILRTHRKHlPKQMRLLGDEYVKKEFRSHKNIENPIHIIGFLKEWQMYAQKLEGN 90
                    78*********9956****************************************99865 PP

>> Complex1_LYR  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.7   0.1   2.9e-14   1.7e-10       5      57 ..      32      84 ..      29      86 .. 0.94

  Alignments for each domain:
  == domain 1  score: 40.7 bits;  conditional E-value: 2.9e-14
  Complex1_LYR  5 sLYRalLRearkfpdyntreyfrrriRdeFrknkhvtDpekieellkkgreeL 57
                   LYR++LR+ rk   +++r    +++++eFr +k++ +p  i  +lk+++++ 
    KHJ30885.1 32 PLYRRILRTHRKHLPKQMRLLGDEYVKKEFRSHKNIENPIHIIGFLKEWQMYA 84
                  6*********99999999********************************986 PP

>> DUF4028  Protein of unknown function (DUF4028)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.2   5.7e-06     0.034      22      38 ..      53      69 ..      45      74 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 5.7e-06
     DUF4028 22 Gdqyvkkwfrkhennek 38
                Gd+yvkk fr h+n e+
  KHJ30885.1 53 GDEYVKKEFRSHKNIEN 69
                9*************885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       297  (0.0165653); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 859.12
//
Query:       KHJ30886.1  [L=1917]
Description: putative telomere length regulator protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-96  323.3   5.4      2e-96  323.3   5.4    1.7  2  Rif1_N    Rap1-interacting factor 1 N terminal


Domain annotation for each model (and alignments):
>> Rif1_N  Rap1-interacting factor 1 N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  323.3   5.4  1.1e-100     2e-96       1     374 []     103     466 ..     103     466 .. 0.98
   2 ?   -4.1   0.1      0.34     6e+03     248     321 ..     941    1014 ..     904    1032 .. 0.67

  Alignments for each domain:
  == domain 1  score: 323.3 bits;  conditional E-value: 1.1e-100
                 ...........HHHHHS---BGGG....HHHHHHHHHHHHHHHHHHHTSSSSS---HH..HHHHHHHHHHHHHSSHHHHHHHTTHHHTHHHHHHTTTTT CS
      Rif1_N   1 lagsdrssrlDaYmtLlraLkasdnlpdrkalqkkmslllqfiqrDisssssekgnldssLviqAlkllgtllsnpaiastLsddfkvfiidhsirsle 99 
                 lagsd  sr DaY +L+++++a d++pd+++l +++s l q+i+rD+  + +e+g+++s+L++qAl l+  l +np+ia+++++ f +f+++ +i+sle
  KHJ30886.1 103 LAGSDIYSRSDAYVNLSNMIRAFDDTPDSQNLVNNISELGQYIERDLV-AVNENGKPNSTLISQALALVISLQYNPSIAESFPTKFSIFLVEFAIKSLE 200
                 799*********************************************.66678********************************************* PP

                 STT--HHHHHHHHHHHHH--THHHHS-HHHHHHHHTTCCS--.----HHHHHHHHHHHHHHHHHSHHHHHHTHHHHHHHHHHHHHHHHHTTT-HHHHHT CS
      Rif1_N 100 dsstpKniithllsvlsqQkFsskimtservkrllsalenieervkgksiiaerlniyrrLleqapslmlahaelWlpdlfsgllssvkdirekaiqlg 198
                 d+ ++++i ++++++++ Q+Fs+k++tser  +l+ +l++ +++++g +    rl iyr+Ll+ ++slm+ h+  W+ dl+ ++ ss++ ++++ai++g
  KHJ30886.1 201 DPLISRDIKKNVMFMMAHQNFSPKVITSERLRNLIISLNSPSDKIEGRNFFLRRLEIYRHLLKSSKSLMIVHTA-WIGDLLCDMNSSLQAVQISAIKVG 298
                 **************************************************************************.************************ PP

                 TSBHHHHS-HHHHTTS---SHHHH-TTT-BHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHH-STTGGGGSHHHHHHHHHHHHHHTTS-HHHHHHHH CS
      Rif1_N 199 leaalalgkekevskavlelldseleegktlievlierLkkmlkekknekivpqiWsvvilLlrkkrkslesweffnewLkliqkcFnssdpevkieAn 297
                 ++aa++lg+e +v+ a+  l++s+l++++ +++++ + L++   +k+++++vpqiWsv ilL r k + l ++++++++L  + +cFn +d +v+++A+
  KHJ30886.1 299 FQAAVELGSEASVTGALCTLFKSKLNDDELYGTTYLQILMNKARQKEQAVFVPQIWSVLILLQRYKSQILAQSSHMKSFLAALTLCFNQKDVKVQKQAQ 397
                 ********************************************************************999**************************** PP

                 HTTHHHHHHHHHS--TT-HHHHHTTHHH........HHHTSHHHHHHHHHHHHHHHHHHHTT-TTTHHHHHTTTTTH CS
      Rif1_N 298 iaWnrliyavnpdestskkllklLrqPllsqlerkkesksakelreavlsslcnllyyalrplasakqldlvWdevv 374
                 +aWnr+iyav+ +e+t k ++++L++P ++ + ++k+ +        + ++ +nllyya+rp+ s++qldl+Wde+v
  KHJ30886.1 398 YAWNRFIYAVQLSEKTPKPMREILIRPCIQSILNRKSNH--------ISGCFFNLLYYAFRPGCSTSQLDLYWDEFV 466
                 ****************************99988888877........****************************97 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 0.34
                  HHHHHHHHHHH.HHHH-STTGGGGSHHHHHHHHHHHHHHTTS-HHHHHHHHHTTHHHHHHHHHS--TT-HHHHHT CS
      Rif1_N  248 kivpqiWsvvi.lLlrkkrkslesweffnewLkliqkcFnssdpevkieAniaWnrliyavnpdestskkllklL 321 
                   +v+ +W+ +   Llr   + +  ++ ++++ + i ++++s++ ++  +++  W+ ++  ++ d +  k+l ++L
  KHJ30886.1  941 NAVLLLWTTINsSLLRAV-EYIPMKKKLHDLETMIASGLESKNRNIVEMTVETWDAIFSNFSGDLEYFKHLQNML 1014
                  556667766651355554.44667777778888888888888888888888888876655555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1917 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1173  (0.0654247); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.97u 0.26s 00:00:01.23 Elapsed: 00:00:00.43
# Mc/sec: 13318.32
//
Query:       KHJ30887.1  [L=303]
Description: putative spfh domain band 7 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-22   79.6   2.7    4.5e-22   78.9   2.7    1.4  1  Band_7    SPFH domain / Band 7 family
  ------ inclusion threshold ------
      0.087   13.0   0.3       0.19   11.9   0.3    1.5  1  Med2      Mediator complex subunit 2


Domain annotation for each model (and alignments):
>> Band_7  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.9   2.7     5e-26   4.5e-22       3     176 ..      53     230 ..      51     241 .. 0.90

  Alignments for each domain:
  == domain 1  score: 78.9 bits;  conditional E-value: 5e-26
      Band_7   3 ieegevgvv.vr.fGklsrvlepGlhfilPfgrsvtvvsvrvqtldvsvsltvptkDglpvtidvtviy..rvpddapklvaaveresanldnlirrvl 97 
                 ++ g++++  +r  G  ++++  G+h+++P++++ + ++vr    +v     + tkD ++v+i+ +v    r+ d  p++++++  + ++ ++++ +++
  KHJ30887.1  53 VDGGHRAIKyTRiGGVGKEIYSEGTHIKIPWFETPIDYDVRAKPRNVAS--LTGTKDLQMVNITCRVLSrpRI-DALPQIYRTL--GTDYDERVLPSIV 146
                 8999*****6668888888******************************..777*********9999773366.**********..************* PP

      Band_7  98 esalrevisemtleellsnreelaeelknelneqlrkyGvevldvritdidpppevaqalaakqaaeaea.....qaeiaraea 176
                 +++l++v++++++ +l+  re +a  +++ l ++++k+++ + dv++t++ ++pe+ +a++akq a++ea     ++ +ar+e+
  KHJ30887.1 147 NEVLKSVVAQFNASQLITQRENVARLVRDNLSKRAAKFNIMLDDVSLTHLAFSPEFTAAVEAKQVAQQEAqraafVVDKARQEK 230
                 **********************************************************************88877333333333 PP

>> Med2  Mediator complex subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   2.1e-05      0.19      27      96 ..     151     230 ..     142     233 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.1e-05
        Med2  27 ktiqldsnvvtGfnnql............qksLkekikkFhsiLDdleik.lndaksyveqlveikkekeeekeke...eeerqrk 96 
                 k+      vv+ fn ++               L+++ +kF+ +LDd+ ++ l+ + ++  +++ ++  ++e +      ++ rq+k
  KHJ30887.1 151 KS------VVAQFNASQlitqrenvarlvRDNLSKRAAKFNIMLDDVSLThLAFSPEFTAAVEAKQVAQQEAQRAAfvvDKARQEK 230
                 33......334444444444444555788899***************976388888998888777766655544446443333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       882  (0.049194); expected 358.6 (0.02)
Passed bias filter:                      496  (0.0276647); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 2476.91
//
Query:       KHJ30888.1  [L=783]
Description: putative vtc domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-96  321.4   0.1    4.6e-96  321.4   0.1    1.6  2  VTC       VTC domain
    4.2e-12   46.3   0.5    8.8e-12   45.3   0.5    1.6  1  DUF202    Domain of unknown function (DUF202)
      2e-09   37.9  17.1    9.6e-05   22.5   0.3    3.6  4  SPX       SPX domain
  ------ inclusion threshold ------
       0.25   11.4   1.1       0.59   10.2   1.1    1.5  1  DUF3593   Protein of unknown function (DUF3593)


Domain annotation for each model (and alignments):
>> VTC  VTC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.3      0.56   2.5e+03      61     160 ..      30      72 ..      17     146 .. 0.63
   2 !  321.4   0.1     1e-99   4.6e-96       2     275 .]     206     478 ..     205     478 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.56
                 HHHHHHHHT-TT--EEEEEEES-GGG-.-EEEEEEEE--------EEEEEEEE-GGGHHHHH---HHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHH CS
         VTC  61 elyenrilkmegaekiRlRwygkldne.dvflErktkheswtgesstkerftlkqkfvksyllgrlpaeerleklkkkeeekevekleqlaeeiqntil 158
                 + y n  + ++++ k   Rw+++ +++  + lE+                                                             ++  
  KHJ30888.1  30 KSYDNEASTRSNRLKGFKRWTEEDETKfLARLESELD----------------------------------------------------------KVHT 70 
                 4566666666666666666666555555444443322..........................................................2222 PP

                 HT CS
         VTC 159 rn 160
                 ++
  KHJ30888.1  71 KK 72 
                 22 PP

  == domain 2  score: 321.4 bits;  conditional E-value: 1e-99
                 -EEEEEEE-HHHHHHHHHHHHTTS-B----------------------EEEEEEE-TT.-HHHHHHHHT-TT--EEEEEEES-GGG--EEEEEEEE--- CS
         VTC   2 rnetKywvhsdnvvevktlilkhlpvlvygaseeeiaaallrksadqtitsvYfDnnd.felyenrilkmegaekiRlRwygkldnedvflErktkhes 99 
                 r++tKywvh+dn++evk  ilkhlpvlv++ ++e        +s+d++its+YfDn++  ely+ r++k+egae iRlRwyg+++++++f+Erkt++e+
  KHJ30888.1 206 RQTTKYWVHPDNITEVKLIILKHLPVLVFNPNKEF-------DSKDSAITSIYFDNPEtWELYKGRLKKTEGAEAIRLRWYGSMETQTIFVERKTHRED 297
                 89****************************99999.......9*************9758*************************************** PP

                 -----EEEEEEEE-GGGHHHHH---HHHHHHHHHHHHHT-..HHHHHHHHHHHHHHHHHHHHTT-EEEEEEEEEEEEE--TT--SEEEEEEEEEEEEE- CS
         VTC 100 wtgesstkerftlkqkfvksyllgrlpaeerleklkkkee..ekevekleqlaeeiqntilrnslqPvvrtsYlRaaFqlstdnavRitiDtnlcmvre 196
                 wtge+s k+rf+lk+k++++yl+g l  e+++ek +k++    k+++  e+l +eiq+ il++ ++Pv+r  Y+R+aFql+ d +vRi++Dt+l+m+re
  KHJ30888.1 298 WTGEKSVKARFSLKEKNMNAYLRGDLLPEQIFEKVRKDGIkpLKQIDDDERLSKEIQYSILHHGYKPVCRSFYNRTAFQLPADARVRISLDTELTMIRE 396
                 **************************************98777899***************************************************** PP

                 ---SSSS-SS-TSS-SSTTSS-TTTT--GGGEEE--SEEEEEEE--...----HHHHHHHTSTT-EE-TT--HHHHHHHHHH CS
         VTC 197 dsfeerrkledtwerldedvqqpvkllrkgevvrfpyavlEvKlqt...skspewiqeLlashlvievpkfSKYqhgvaslh 275
                 d+++ r++  ++w+r+d+++++p++ l + ++ rfpyavlEvKlqt   ++ pew+++L+ashlv++vpkfSK++hg+a l+
  KHJ30888.1 397 DDLDGRKRAGENWRRMDIGIDYPFSNLPSDDIERFPYAVLEVKLQTqlgQEPPEWVRDLIASHLVEAVPKFSKFIHGTAKLF 478
                 ************************************************99*****************************986 PP

>> DUF202  Domain of unknown function (DUF202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.5     2e-15   8.8e-12       1      67 [.     667     731 ..     667     732 .. 0.87

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 2e-15
      DUF202   1 rdglAnERTfLaWlRtslalialglallrffltgepsalgkilglilivlgiltllvglvrylrrqr 67 
                 ++++A+ERTfL+Wl  +++l+ +++all+f     + ++ +  ++++i ++i++ ++++v y  r r
  KHJ30888.1 667 KVYFAAERTFLSWLEYCIYLAYISVALLNFG--TKNRQSDFFPAIAFIMVTIISTIYSMVMYGYRSR 731
                 689**************************94..3334446999*****************9987766 PP

>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   1.7   1.3e-06     0.006       1      42 [.       1      39 [.       1      52 [. 0.85
   2 !   10.4   0.4   9.9e-05      0.44     181     213 ..      44      84 ..      33     102 .. 0.79
   3 !   22.5   0.3   2.1e-08   9.6e-05     349     373 ..     125     149 ..     106     158 .. 0.91
   4 ?   -3.4   0.1       1.5   6.8e+03     122     133 ..     514     525 ..     499     616 .. 0.58

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.3e-06
         SPX  1 MKFakeLeenlvpEWrdaYldYkqLKKlIkkvqreleslgle 42
                MKF+ +L  +++ E + +Y+ Y+ LK  +k   +e     ++
  KHJ30888.1  1 MKFGYQLRTSIIKEYQWHYIAYDELKAQLKSYDNEAS---TR 39
                *******************************999555...33 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 9.9e-05
         SPX 181 r........aekeFferLdseLnkvetFykakeeefterle 213
                 +         e++F++rL seL+kv t  k k  e  +r++
  KHJ30888.1  44 KgfkrwteeDETKFLARLESELDKVHTKKKLKSIEISRRIA 84 
                 23444555599*******************99999999876 PP

  == domain 3  score: 22.5 bits;  conditional E-value: 2.1e-08
         SPX 349 lLKsYqeLNrtAFrKIlKKfDKvta 373
                 +L ++  LN  +F KI KK+DK+t+
  KHJ30888.1 125 DLAKFVQLNYSGFQKIIKKHDKQTN 149
                 799*********************8 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 1.5
         SPX 122 sssssddssesn 133
                 +ss sdd+s+++
  KHJ30888.1 514 PSSTSDDDSDDD 525
                 222222222222 PP

>> DUF3593  Protein of unknown function (DUF3593)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.1   0.00013      0.59       7      56 ..     677     728 ..     674     732 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00013
     DUF3593   7 lsllpYllFLvllkkske..lpkltlvGfallLlFvavtipagivakevyge 56 
                 ls l Y ++L +++       +k     f   + F++vti+ +i++ ++yg+
  KHJ30888.1 677 LSWLEYCIYLAYISVALLnfGTKNRQSDFFPAIAFIMVTIISTIYSMVMYGY 728
                 6778888888888655444345666778999*******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (783 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.71u 0.30s 00:00:01.01 Elapsed: 00:00:00.46
# Mc/sec: 5138.55
//
Query:       KHJ30889.1  [L=274]
Description: putative tho complex subunit 7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.3e-43  146.0   8.1    7.3e-43  146.0   8.1    1.9  2  THOC7     Tho complex subunit 7
  ------ inclusion threshold ------
       0.11   11.0   3.9       0.13   10.8   3.9    1.1  1  FUSC      Fusaric acid resistance protein family
        0.6   10.8   8.6        2.8    8.6   1.6    2.4  2  YabA      Initiation control protein YabA


Domain annotation for each model (and alignments):
>> THOC7  Tho complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.0   8.1   1.2e-46   7.3e-43       1     132 []      27     184 ..      27     184 .. 0.98
   2 ?   -3.4   3.6       1.9   1.1e+04      67     108 ..     195     236 ..     185     242 .. 0.60

  Alignments for each domain:
  == domain 1  score: 146.0 bits;  conditional E-value: 1.2e-46
       THOC7   1 eeliksRLlnveerplkrltkrllklltsla.........................esteeeleqlkedllldfaafelsierlqllakanerererye 74 
                 +el+ksRLlnvee+p+kr+ krll+ ++s                            +  ee +q+ked+l+df+afe+s+ r+q+l ++nererery 
  KHJ30889.1  27 DELHKSRLLNVEEKPFKRVSKRLLA-PSSFLttpsklptppldislgdtdlqiqaqVKINEERRQFKEDILFDFSAFESSLIRIQFLRDSNERERERYR 124
                 89***********************.888778***********************988899************************************** PP

       THOC7  75 aekeeieseieavreeieelkaqLeearatranrkeydelaekItsnp..kpReeqeaql 132
                 a+k++i+++++ vre++++l++qL+ear+t+++rk++delaekIt n+  +pRe+q a+l
  KHJ30889.1 125 ADKARILETAQYVRENNAQLRSQLDEARQTLEQRKKFDELAEKITGNRllRPREDQLANL 184
                 ********************************************************9987 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.9
       THOC7  67 erereryeaekeeieseieavreeieelkaqLeearatranr 108
                 ere ++y+   +e  ++   + ee  +l+  + +++++ ++r
  KHJ30889.1 195 ERESKNYKITWAERREKFGRIVEEGMQLRRLIRDEKEEVERR 236
                 566666666656666666666666666666666666665555 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   3.9   2.2e-05      0.13     247     335 ..     121     210 ..      93     238 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 2.2e-05
        FUSC 247 aeeaaavpelaallaelaaleaaaaaealeaalaalrarlralrrale........adadtaalllarlaellaelaqllaslraleaaiaa.....ar 332
                 ++ +a     a +l+          a+  +++ a+lr +l+++r+ le        a+  t+ +ll+   ++la+l+ l +++r+le++ ++     a+
  KHJ30889.1 121 ERYRAD---KARILE---------TAQYVRENNAQLRSQLDEARQTLEqrkkfdelAEKITGNRLLRPREDQLANLRKLEEECRELERESKNykitwAE 207
                 222222...222222.........3444444445555555444444444555555999999*************************9999887775544 PP

        FUSC 333 rae 335
                 r+e
  KHJ30889.1 208 RRE 210
                 444 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.8    0.0033        20      28      63 ..     124     159 ..     100     173 .. 0.60
   2 ?    8.6   1.6   0.00047       2.8       6      63 ..     180     237 ..     176     252 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0033
                 HHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXX CS
        YabA  28 keelaelleenaeLeleneklrerleeeekkekekk 63 
                 +++ a++le  + ++ +n +lr++l+e++++ +++k
  KHJ30889.1 124 RADKARILETAQYVRENNAQLRSQLDEARQTLEQRK 159
                 444555566666666666666666633333322222 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00047
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXX CS
        YabA   6 lfdkleeleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekekk 63 
                  +++l++lee+ +el +e ++ k ++ae  e+  ++  e  +lr+++++e+++ ++++
  KHJ30889.1 180 QLANLRKLEEECRELERESKNYKITWAERREKFGRIVEEGMQLRRLIRDEKEEVERRE 237
                 568899*****************************************54444433332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1236  (0.0689386); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 1973.58
//
Query:       KHJ30890.1  [L=77]
Description: putative ubiquitin-like protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.6e-26   89.3   0.2    1.1e-25   89.2   0.2    1.0  1  ubiquitin    Ubiquitin family
    2.5e-13   49.6   0.2    2.8e-13   49.5   0.2    1.0  1  Rad60-SLD    Ubiquitin-2 like Rad60 SUMO-like
    8.8e-06   26.1   0.1    3.7e-05   24.1   0.1    1.8  1  Ubiquitin_2  Ubiquitin-like domain
  ------ inclusion threshold ------
      0.011   16.0   0.1      0.013   15.8   0.1    1.1  1  Ubiquitin_5  Ubiquitin-like domain
      0.043   13.7   0.0       0.05   13.5   0.0    1.1  1  TBK1_ULD     TANK binding kinase 1 ubiquitin-like domain
       0.11   12.6   0.3        7.1    6.7   0.1    2.0  2  Ubiquitin_4  Ubiquitin-like domain


Domain annotation for each model (and alignments):
>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.2   0.2   3.5e-29   1.1e-25       1      72 []       3      74 ..       3      74 .. 0.98

  Alignments for each domain:
  == domain 1  score: 89.2 bits;  conditional E-value: 3.5e-29
                EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEESSC CS
   ubiquitin  1 itvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlrlr 72
                ++v+tl+gk+i+l+ve + t+e++Ke+++ekegip+ qqrLi+ Gk+++d+++ ++y++++g++lhlvl lr
  KHJ30890.1  3 LKVRTLTGKEIELDVELDFTIEQIKERVEEKEGIPPVQQRLIFGGKQMSDDKKAKDYNLEPGCILHLVLALR 74
                68******************************************************************9876 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.5   0.2   9.2e-17   2.8e-13       2      72 .]       2      71 ..       1      71 [. 0.97

  Alignments for each domain:
  == domain 1  score: 49.5 bits;  conditional E-value: 9.2e-17
                EEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEEX CS
   Rad60-SLD  2 kiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvvi 72
                 +++++ +gke+++ V+ ++t+++++e+ ++k+gip+  ++rLiF G+++++++  +d+ +e g ++++v+
  KHJ30890.1  2 LLKVRTLTGKEIELDVELDFTIEQIKERVEEKEGIPP-VQQRLIFGGKQMSDDKKAKDYNLEPGCILHLVL 71
                689**********************************.**************************9999986 PP

>> Ubiquitin_2  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.1   1.2e-08   3.7e-05      16      80 ..      13      69 ..       4      70 .. 0.86

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 1.2e-08
                 EEEEEETTSBHHHHHHHHHHHH---TTCEEEEEE.-SSSSEEECSSGCCSBCCCCT--TTEEEEE CS
  Ubiquitin_2 16 serrfsksltieelKekLelitGtspasmrLqlyddkkdnevsklddddalLgsYgvkdgmrihV 80
                  e  ++++ tie++Ke++e   G++p ++rL +          k + dd++ ++Y++++g+ +h 
   KHJ30890.1 13 IELDVELDFTIEQIKERVEEKEGIPPVQQRLIFG--------GKQMSDDKKAKDYNLEPGCILHL 69
                 57778899*************************9........55667899999999999999995 PP

>> Ubiquitin_5  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.8   0.1   4.3e-06     0.013      31      79 ..      10      58 ..       3      73 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 4.3e-06
  Ubiquitin_5 31 ekkklletkLdvtgkelvskiaeefglkensiKlilngklleldktLee 79
                  k   l+++Ld t +++ +++ e+ g+   + +li  gk+++ dk+  +
   KHJ30890.1 10 GKEIELDVELDFTIEQIKERVEEKEGIPPVQQRLIFGGKQMSDDKKAKD 58
                 46678999********************9*************9998665 PP

>> TBK1_ULD  TANK binding kinase 1 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.7e-05      0.05      24      57 ..      22      55 ..      12      63 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.7e-05
    TBK1_ULD 24 tvaifqeevakqTkiaaekQellfeghrllleps 57
                t++++ e v ++  i++ +Q l+f g+++  +++
  KHJ30890.1 22 TIEQIKERVEEKEGIPPVQQRLIFGGKQMSDDKK 55
                788999*********************9866555 PP

>> Ubiquitin_4  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.1    0.0024       7.1       2      33 ..       2      33 ..       1      36 [. 0.91
   2 ?    4.5   0.0     0.012        35      58      85 ..      43      69 ..      39      73 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0024
  Ubiquitin_4  2 kvtvkkldgeslevvvkqnatvkdLkkaierk 33
                  ++v+ l g+ +e+ v+   t++++k+ +e+k
   KHJ30890.1  2 LLKVRTLTGKEIELDVELDFTIEQIKERVEEK 33
                 57899999********************9976 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.012
  Ubiquitin_4 58 LsfegekLkddkaklkeygirnkselsF 85
                 L+f g++++ddk k k+y ++ ++ l+ 
   KHJ30890.1 43 LIFGGKQMSDDK-KAKDYNLEPGCILHL 69
                 889999988776.5699*9999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.35u 0.27s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 576.68
//
Query:       KHJ30891.1  [L=1030]
Description: putative dna replication licensing factor mcm4 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.9e-100  334.0   0.0     5e-100  333.2   0.0    1.4  1  MCM              MCM P-loop domain
    5.9e-39  132.8   0.6    1.1e-38  131.9   0.6    1.4  1  MCM_OB           MCM OB domain
    2.3e-30  104.8   3.7      6e-30  103.5   3.7    1.8  1  MCM_lid          MCM AAA-lid domain
    4.4e-17   62.6   1.4    1.3e-16   61.1   0.8    2.2  1  MCM_N            MCM N-terminal domain
      8e-06   25.4   0.2     0.0004   19.8   0.0    2.7  3  Mg_chelatase     Magnesium chelatase, subunit ChlI
    8.2e-06   25.9   0.0      3e-05   24.0   0.0    2.1  2  AAA_5            AAA domain (dynein-related subfamily)
    0.00026   20.8   0.0     0.0031   17.4   0.0    2.4  2  AAA_3            ATPase family associated with various cellul
     0.0053   17.4   0.0      0.025   15.2   0.0    2.0  2  DUF3800          Protein of unknown function (DUF3800)
  ------ inclusion threshold ------
      0.012   15.5   0.1      0.027   14.3   0.1    1.5  1  AAA_lid_2        AAA lid domain
      0.056   13.5   0.0       0.16   12.0   0.0    1.8  1  HTH_20           Helix-turn-helix domain
      0.081   12.6   0.1        3.8    7.2   0.0    3.0  3  Sigma54_activat  Sigma-54 interaction domain
       0.19   12.4   2.8       0.74   10.5   1.6    2.6  2  Mg_chelatase_C   Magnesium chelatase, subunit ChlI C-terminal


Domain annotation for each model (and alignments):
>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  333.2   0.0  3.4e-103    5e-100       2     224 .]     597     821 ..     596     821 .. 0.98

  Alignments for each domain:
  == domain 1  score: 333.2 bits;  conditional E-value: 3.4e-103
                 HHHHHHHHTSSTHHHHHHHHSSTTSSS-HHHHHHHHHHHH---EBBBSSSSB..BCSS-EEEEEESSTSTHHHHHHHHHHHSSSEEEEESSSSSSSHSS CS
         MCM   2 veeikelakekdiieklvksiapsiyghedvkkaillqlfggvkkkledktk..lrgdinvllvgdpgtaKsqlLkyveklapravytsgkgssaagLt 98 
                 +++i e+++++d+++ l++s+apsi++++dvkk+illqlfgg++k+ e++ +  +rgdinvll+gdp+t+KsqlL+yv+k+apr+vytsgkgssa+gLt
  KHJ30891.1 597 KQRILEISNKPDLYDLLSRSLAPSIFEMDDVKKGILLQLFGGTNKSFEKGGSpkYRGDINVLLCGDPSTSKSQLLQYVHKIAPRGVYTSGKGSSAVGLT 695
                 67899****************************************999976555********************************************* PP

                 SEEEEESSSSSEEEEETHHHHTTTSEEEEESGGGSTCHHHHHHHHHHHHSEEEEESSSCEEEEE--EEEEEEE--SSSSCCTTS-HHHHSSSSHHHHHH CS
         MCM  99 aavvrdeetgefvleaGalvladkGvcciDefdkmkeedrsalhEamEqqtisiaKaGivatLnartsvlaAanpkagrydkkksvaeninlsaalLsr 197
                 a+v+rd+e++++vle+Galvl+d+GvcciDefdkm++++rs+lhE+mEqqt+siaKaGi++tLnarts+la+anp++++y+++ +v +ni+l+++lLsr
  KHJ30891.1 696 AYVTRDPENRQLVLESGALVLSDGGVCCIDEFDKMSDATRSVLHEVMEQQTVSIAKAGIITTLNARTSILASANPIGSKYNPNLPVPQNIDLPPTLLSR 794
                 *************************************************************************************************** PP

                 SSEEEEE-SSTTHHHHHHHHHHHHHHH CS
         MCM 198 FDlifvllDkvdeekDeelaehivslh 224
                 FDl++++lD+vde++D++la+h++s++
  KHJ30891.1 795 FDLVYLILDRVDESNDRRLARHLLSMY 821
                 ***********************9986 PP

>> MCM_OB  MCM OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.9   0.6   7.2e-42   1.1e-38       2     125 ..     407     535 ..     406     536 .. 0.95

  Alignments for each domain:
  == domain 1  score: 131.9 bits;  conditional E-value: 7.2e-42
                 XGG--GGGTTSEEEEEEEEEEE---EEEEEEEEEEETTT-.-EEE.....S----SB-..TTT-HHH-EEE-GGGSEEEEEEEEEEE------------ CS
      MCM_OB   2 lRdlrsehigklvkveGivtrasevkpklkkavfeckkcgktvev.....eleePrkCeekeCeskdpfkletekskfvdfqklklQEspeevpaGelP 95 
                 +Rdl+ ++++k++ ++G+v+r++ + p++k a+f+c+ c++tv+v     ++ eP+kC+++ C+s +++++ +++s+f+d+q +klQE+p++vpaG++P
  KHJ30891.1 407 MRDLNPSDVDKIIAIKGLVIRTTPIIPDMKDAFFRCQVCNHTVKVdidrgRILEPTKCPRPICDSPNSMQIIHNRSEFMDKQVIKLQETPDNVPAGQTP 505
                 8*******************************************9566666667********************************************* PP

                 -EEEEEEEGGGTT---TT-EEEEEEEEEEE CS
      MCM_OB  96 rslevileddlvdkvkPGdrvevtGiyral 125
                 +s++++++d+lvd +k+Gdrve+tGi++a+
  KHJ30891.1 506 HSVTMCAYDELVDLCKAGDRVEITGIFKAS 535
                 **************************9976 PP

>> MCM_lid  MCM AAA-lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.5   3.7     4e-33     6e-30       1      86 [.     839     926 ..     839     927 .. 0.93

  Alignments for each domain:
  == domain 1  score: 103.5 bits;  conditional E-value: 4e-33
                 HHHHHHHHHHHHTT--BETCHHHHHHHHHHHHHHHHHTSS..TSSSST--HHHHHHHHHHHHHHHHHHTSSSE-HHHHHHHHHHHHHH CS
     MCM_lid   1 ellrkYiayarekikPklseeakeklseaYvelRkeeeds..krksipitvRqLesliRLseAlAklrlsevvteedveeairllkes 86 
                 e+l++Yi+yar++++P++s ea+e+l++ Yve+Rk  ed   ++++i++t+RqLes+iRL+eA+Ak+rlse+vt++dv+ea+rl+k++
  KHJ30891.1 839 EFLTSYISYARSTCQPRISSEASEELVNSYVEMRKLGEDIraSERRITATTRQLESMIRLAEAHAKMRLSETVTRDDVKEAVRLIKSA 926
                 689********************************9943344799****************************************986 PP

>> MCM_N  MCM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.1   0.8   8.6e-20   1.3e-16       4      87 ..     241     352 ..     239     400 .. 0.80

  Alignments for each domain:
  == domain 1  score: 61.1 bits;  conditional E-value: 8.6e-20
       MCM_N   4 FedFLeefk..............ddsededgekkYrdqlqemaerekttLevdlddLaafde..eLaeailenpkeylplleealkevvkklepsykdd 86 
                 F++FL +fk              ++++ +++++ Y++ +++m++ + t+L++d+++L+a+ +  +L+++ +++p++++ l+++++k+v+ +l+++++  
  KHJ30891.1 241 FKSFLYNFKkeyrlwadgitqeeTAQDPDANTREYIELMKDMLRLGVTSLNLDFRNLKAYPPtrKLWQQAQDYPQDIVTLMDQGIKDVMYELAEKEMSI 339
                 9******************9998667778889****************************8888****************************9976665 PP

       MCM_N  87 ............a 87 
                             +
  KHJ30891.1 340 qrqsrnasqksrQ 352
                 4433334444440 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       2.9   4.3e+03      37      79 ..     320     363 ..     319     369 .. 0.66
   2 ?    2.4   0.0     0.059        89      21      48 ..     653     680 ..     651     693 .. 0.90
   3 !   19.8   0.0   2.7e-07    0.0004      98     160 ..     710     772 ..     705     795 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.9
  Mg_chelatase  37 mlakrlpsllpplseeealevakiasvag.kkeeekllkrrpfr 79 
                   ++ + ++ ++ +l e+e+   ++ +  ++ +++++ l +++pf 
    KHJ30891.1 320 LMDQGIKDVMYELAEKEMSIQRQSRNASQkSRQSKMLSSEPPFP 363
                   66677888888898888877777766666244445555666775 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.059
  Mg_chelatase  21 GgHnlllvGppGsGKtmlakrlpsllpp 48 
                   G  n+ll+G p + K+ l + ++++ p+
    KHJ30891.1 653 GDINVLLCGDPSTSKSQLLQYVHKIAPR 680
                   7789*******************99986 PP

  == domain 3  score: 19.8 bits;  conditional E-value: 2.7e-07
  Mg_chelatase  98 kpGeislahnGvLfLDElpefkrkvlevLRePledgevtisrakakvefparfqlvaamNpcp 160
                   + G++ l+  Gv  +DE+ +++  +  vL e +e+++v+i++a   ++  ar+ ++a++Np  
    KHJ30891.1 710 ESGALVLSDGGVCCIDEFDKMSDATRSVLHEVMEQQTVSIAKAGIITTLNARTSILASANPIG 772
                   679999******************************************************965 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0     2e-08     3e-05       1     124 [.     656     772 ..     656     795 .. 0.79
   2 ?   -3.2   0.1       5.2   7.8e+03      28      62 ..     903     930 ..     886     941 .. 0.54

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 2e-08
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEE.E--TT--HHHHH--B--.........--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..- CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyv.qltrdtteedlkgrreikngttslvdsplvraaregeilvlDEveraesevlnsLlslleerrlllee 98 
                 +vlL G+p t Ks+l +++ +   r v +   +++    +     r+++n++ +l+ ++lv     g ++++DE++++++++ ++L+ ++e++++++++
  KHJ30891.1 656 NVLLCGDPSTSKSQLLQYVHKIAPRGVYTSgKGSSAVGLTA-YVTRDPENRQLVLESGALV--LSDGGVCCIDEFDKMSDATRSVLHEVMEQQTVSIAK 751
                 699999999******99999999555444303333333333.345667799999*******..99*******************************999 PP

                 SSSEEE---......-EEEEEESS-- CS
       AAA_5  99 ggelvkaknddllerfrviatanpld 124
                  g  +  ++      ++++a+anp  
  KHJ30891.1 752 AGIITTLNAR-----TSILASANPIG 772
                 9999888886.....89999999877 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 5.2
                 EEEE--TT--HHHHH--B--.........------ CS
       AAA_5  28 eyvqltrdtteedlkgrreikngttslvdsplvra 62 
                   + l++  t++d+k  +++        +s+l++a
  KHJ30891.1 903 AKMRLSETVTRDDVKEAVRL-------IKSALKQA 930
                 34555666666666666664.......44444444 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.38   5.7e+02      15      44 ..     477     506 ..     473     517 .. 0.82
   2 !   17.4   0.0   2.1e-06    0.0031      48     122 ..     701     780 ..     657     786 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.38
       AAA_3  15 lvkalakaldlefkriqftpdllPsdilGt 44 
                 ++++ ++ +d ++ ++q tpd +P+  + +
  KHJ30891.1 477 IIHNRSEFMDKQVIKLQETPDNVPAGQTPH 506
                 667778999***************976655 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 2.1e-06
       AAA_3  48 eekekefefkkGpvfan...llladeinrappktqsalleameerqvtvege..thklpepflvlatqnPieqeGtyplp 122
                 + +++++ +++G+++ +   +   de ++ +  t+s l e+me+++v+++++   ++l+    +la  nPi ++   +lp
  KHJ30891.1 701 DPENRQLVLESGALVLSdggVCCIDEFDKMSDATRSVLHEVMEQQTVSIAKAgiITTLNARTSILASANPIGSKYNPNLP 780
                 455688888888876433448999***********************9987622679**************988776666 PP

>> DUF3800  Protein of unknown function (DUF3800)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.7e-05     0.025       2      69 ..     184     370 ..     183     411 .. 0.66
   2 ?   -2.8   0.0       6.3   9.4e+03      74      74 ..     575     575 ..     473     636 .. 0.52

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.7e-05
     DUF3800   2 iYiDESGd...............nklkdgsspyfvlgg..........kkie.eikkleekikelkkky.............................. 44 
                 i++DESG+               ++l+ ++s+  ++gg          + i+ +   ++ ++ ++kk+y                              
  KHJ30891.1 184 IFMDESGNivreipseasgaptfSNLDPNTSDAAAMGGmsqfciwgtnVSITdTLSIFKSFLYNFKKEYrlwadgitqeetaqdpdantreyielmkdm 282
                 8****************************************99999984555677777899*************************9997777777777 PP

     DUF3800  45 .....................................................krlleriakflkkndlik..............sdeesde 69 
                                                                      ++ ++r ++ + +    k              s++++++
  KHJ30891.1 283 lrlgvtslnldfrnlkaypptrklwqqaqdypqdivtlmdqgikdvmyelaekEMSIQRQSRNASQ----KsrqskmlsseppfpSSDQENN 370
                 777766666666666666666555555544444444444333333332222222222222222222....0222233334444443333444 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 6.3
     DUF3800  74 v 74 
                 +
  KHJ30891.1 575 E 575
                 1 PP

>> AAA_lid_2  AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   1.8e-05     0.027      22      50 ..     895     923 ..     888     925 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.8e-05
   AAA_lid_2  22 llraArAlAalegrdyVtpeDvkeaaplV 50 
                 ++r A A+A ++  ++Vt +Dvkea++l+
  KHJ30891.1 895 MIRLAEAHAKMRLSETVTRDDVKEAVRLI 923
                 89***********************9986 PP

>> HTH_20  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00011      0.16      28      61 .]     980    1019 ..     966    1019 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00011
                  HHHHHHHT......S-HHHHHHHHHHHHHCTTEEEECTEE CS
      HTH_20   28 selaerld......lskntlsyHLrvLeeagLvevvregr 61  
                  +e+ +rl+      + +n++   +r+Le+ gL++vv+eg+
  KHJ30891.1  980 NEFVRRLGdqssipVEQNEVMEAIRALEQEGLLTVVGEGP 1019
                  6777888557778899**********************96 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.29   4.3e+02      21      48 ..     653     680 ..     644     686 .. 0.88
   2 ?    7.2   0.0    0.0026       3.8      86     139 ..     711     766 ..     708     773 .. 0.80
   3 ?   -0.5   0.0      0.57   8.5e+02     122     151 ..     871     898 ..     866     908 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.29
                      SSS-EEEECSTTSSHHHHHHHHHHHSTT CS
  Sigma54_activat  21 tdlsvlitGesGtGKellaraiheaskr 48 
                       d++vl+ G+  t K+ l + +h+  +r
       KHJ30891.1 653 GDINVLLCGDPSTSKSQLLQYVHKIAPR 680
                      5799*******************97765 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0026
                      EHHHHHTTTSEEEEETGGGS-HHHHHHHHHHHHHSEE..ESBTSSSEEE--EEEEE CS
  Sigma54_activat  86 kGlfekadgGtlfLDeigelplelQekLlrvlqegev..ervGsskeikvdvriia 139
                      +G++  +dgG+  +De  +++ ++ + L +v+++++v   + G  ++ ++ + i+a
       KHJ30891.1 711 SGALVLSDGGVCCIDEFDKMSDATRSVLHEVMEQQTVsiAKAGIITTLNARTSILA 766
                      699999***************************99761146666666666666555 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.57
                      EESBTSSSEEE--EEEEEEESS-HHHHHHT CS
  Sigma54_activat 122 vervGsskeikvdvriiaatnedleeavee 151
                      ++++G+   i+++ r i+at+++le++++ 
       KHJ30891.1 871 MRKLGE--DIRASERRITATTRQLESMIRL 898
                      556665..467778999*********9975 PP

>> Mg_chelatase_C  Magnesium chelatase, subunit ChlI C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       3.6   5.3e+03      35      59 ..     725     749 ..     722     761 .. 0.85
   2 ?   10.5   1.6    0.0005      0.74      12      91 ..     846     921 ..     840     922 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 3.6
  Mg_chelatase_C  35 revceldeeaeelleeaierlglsa 59 
                     +e+ +++++++++l+e++e++++s 
      KHJ30891.1 725 DEFDKMSDATRSVLHEVMEQQTVSI 749
                     5667899999*********999985 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.0005
  Mg_chelatase_C  12 aaAreiqkeRfakenaelsgeelrevceldeeaeelleeaierlglsaRaydrilkvArTiADLegseeieeehlaeAlq 91 
                       Ar+  + R+    +e+s+e +++++e+++ +e++ ++  +r + ++R+++ ++++A   A ++ se++++++++eA++
      KHJ30891.1 846 SYARSTCQPRI---SSEASEELVNSYVEMRKLGEDI-RASERRITATTRQLESMIRLAEAHAKMRLSETVTRDDVKEAVR 921
                     55777777777...8899999999999999888775.67778999*********************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1030 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1166  (0.0650343); expected 358.6 (0.02)
Passed bias filter:                      747  (0.0416643); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.84u 0.30s 00:00:01.13 Elapsed: 00:00:00.44
# Mc/sec: 6961.90
//
Query:       KHJ30892.1  [L=446]
Description: putative alternative oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-14   54.3   0.0      2e-12   47.5   0.0    2.2  1  O-FucT    GDP-fucose protein O-fucosyltransferase


Domain annotation for each model (and alignments):
>> O-FucT  GDP-fucose protein O-fucosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.5   0.0   1.1e-16     2e-12       5     334 ..      82     408 ..      77     410 .. 0.70

  Alignments for each domain:
  == domain 1  score: 47.5 bits;  conditional E-value: 1.1e-16
      O-FucT   5 npaeGgfNnqrdvilrmvavarllnaTLVlPpw...........dqlshwrdsskqnrlpFsdfFd....iesLkkdvrviemeeflkelppelwsaek 88 
                 n + Gg +  r++il++v +a   +a LVlP++             +  ++++  q+    +++Fd     esL+k ++ +     ++++p+     ++
  KHJ30892.1  82 NANYGGVGHVRNSILNCVRFAIGAGASLVLPQIiereitdgmggG-QLPLKRHG-QKLHGLDYMFDvnhfSESLRKSCPEL---ILIRKMPDAAIGDRR 175
                 6778*****************************998888888743.34445554.89999******777779999999776...577877744444433 PP

      O-FucT  89 r...............ksvckeakpsyylkeilpllkkkkvvqlakf.....qklrCrskqgnpfg..lwdnfevsfeaelvlhdefg.eeWkarv... 161
                 +                    e ++++ +             +++k         + +  + npf+  l+  f         lh  ++ + +  ++   
  KHJ30892.1 176 QallpeslfpniptsgL----EHPEEWPQ-------------RFNKWldenlAPASIN--KQNPFVidLEPSF---------LHYPTHsDGHAVAHvfg 246
                 34554444443332221....11111111.............1111122111111111..2233333344444.........32222222333333456 PP

      O-FucT 162 daLrFskeieelaaklvkrll.........ekrkakggpylalHLRrekDflaaCehgggeeellaspresrreegkltpeecvpsleeialqlkgllk 251
                 ++L+F+++i++la + +  l          ++r+     +l++HL ++  fl                   +r+e  +        +e+  ++ +++++
  KHJ30892.1 247 NILQFRSDIRQLATTALGTLVdwyefpvniSRRGLLRPSFLGAHLETQDPFLE------------------QRHEIDIEY----SHFEAQSKSYLDVSS 323
                 89*************************99988888899**********77888..................333333333....5699999******** PP

      O-FucT 252 elkltsvfvAtdeiyggeelkelkkefpnlv..kvtkeklaskeelekfkdgsva...aiDqiicsrsdvFigtyeStfsafvkreRe 334
                 +l+l++++ A+++ ++   + +l++  +++     +ke+l++ ++l k+++ s+     +D++i++++++F+g  +S fs ++   Re
  KHJ30892.1 324 DLQLSVIYAASGNLED---ITNLNHDAEKYDivVTHKEDLLDDDDLIKLHKLSYDqqsLVDYLILTKAEAFVGVGHSPFSWNIALARE 408
                 ************9994...677776665432246899********9999998888888***********************9998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       315  (0.0175693); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3318.53
//
Query:       KHJ30893.1  [L=335]
Description: putative rna recognition motif containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.8e-31  108.4   1.6    1.8e-31  108.4   1.6    1.9  2  CSTF2_hinge  Hinge domain of cleavage stimulation factor subu
    1.2e-23   82.7   0.0      2e-23   82.0   0.0    1.4  1  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
    9.8e-10   37.9   2.0    9.8e-10   37.9   2.0    2.8  4  CSTF_C       Transcription termination and cleavage factor C-
  ------ inclusion threshold ------
      0.018   15.1   0.0       0.04   14.0   0.0    1.6  1  RRM_7        RNA recognition motif
       0.16   11.8   2.0        1.1    9.0   0.2    2.7  3  PheRS_DBD1   PheRS DNA binding domain 1
       0.26   11.2   0.1        6.5    6.7   0.0    2.2  2  DUF3198      Protein of unknown function (DUF3198)


Domain annotation for each model (and alignments):
>> CSTF2_hinge  Hinge domain of cleavage stimulation factor subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.4   1.6   6.2e-35   1.8e-31       1      80 [.     142     221 ..     142     222 .. 0.97
   2 ?   -2.6   0.2       2.7   8.1e+03      10      31 ..     306     327 ..     298     329 .. 0.56

  Alignments for each domain:
  == domain 1  score: 108.4 bits;  conditional E-value: 6.2e-35
  CSTF2_hinge   1 plPqgvqlppglsapdaIsktLsslppeqllellsqlKalaqqnpsqarelLkqnpqLayAllqalllmglvdpdvvtkv 80 
                  plP gv++ppgls+pdaIs+tL++lpp+qll++lsq+K+la+++ ++a+elL+q+pqL+yA++qalllm+l+ ++++ +v
   KHJ30893.1 142 PLPLGVEVPPGLSCPDAISRTLNTLPPQQLLDVLSQMKTLATTDAAKATELLHQAPQLSYAIFQALLLMNLISTEALGSV 221
                  79************************************************************************999877 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.7
  CSTF2_hinge  10 pglsapdaIsktLsslppeqll 31 
                  + l +p++   tL     +qll
   KHJ30893.1 306 QVLAMPQELIDTLPVAERNQLL 327
                  2555666666666666666665 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.0   0.0   6.8e-27     2e-23       1      70 []      10      80 ..      10      80 .. 0.99

  Alignments for each domain:
  == domain 1  score: 82.0 bits;  conditional E-value: 6.8e-27
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70
                +fVgn+p+ +tee++ ++Fs  G++ +++lv+d etg++kgf+fVeF+++++A +A+++ln +++++r+l+
  KHJ30893.1 10 VFVGNIPYGLTEEQIIRIFSSAGKVLNFRLVYDrETGRPKGFGFVEFPDSDSASSAVRNLNDYEIMNRKLR 80
                8*******************************************************************986 PP

>> CSTF_C  Transcription termination and cleavage factor C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1       2.6   7.6e+03      15      20 ..      19      24 ..      19      24 .. 0.91
   2 ?   -0.5   0.1      0.32   9.7e+02      19      27 ..     162     170 ..     160     171 .. 0.86
   3 ?   -2.8   0.1       1.6   4.9e+03       7      16 ..     191     200 ..     188     207 .. 0.78
   4 !   37.9   2.0   3.3e-13   9.8e-10       6      40 ..     301     335 .]     299     335 .] 0.95

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.6
      CSTF_C 15 LseeqI 20
                L+eeqI
  KHJ30893.1 19 LTEEQI 24
                89***9 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.32
      CSTF_C  19 qIaaLPpdq 27 
                 +++ LPp+q
  KHJ30893.1 162 TLNTLPPQQ 170
                 7899***98 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1.6
      CSTF_C   7 eLlqQVLqLs 16 
                 eLl Q  qLs
  KHJ30893.1 191 ELLHQAPQLS 200
                 8999998988 PP

  == domain 4  score: 37.9 bits;  conditional E-value: 3.3e-13
      CSTF_C   6 aeLlqQVLqLseeqIaaLPpdqRrsImiLrqQlrr 40 
                 ++L+qQVL++++e I+ LP  +R++++ Lr ++ r
  KHJ30893.1 301 EQLMQQVLAMPQELIDTLPVAERNQLLALRASYGR 335
                 79****************************99976 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.3e-05      0.04       1      31 [.       7      36 ..       7      85 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.3e-05
       RRM_7  1 srkvFvGGlPiDiteeelkatfkefgkvlvd 31
                s+ vFvG +P  +tee++++ f++ gkvl +
  KHJ30893.1  7 SKSVFVGNIPYGLTEEQIIRIFSSAGKVL-N 36
                678**********************9985.4 PP

>> PheRS_DBD1  PheRS DNA binding domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.2   0.00038       1.1       6      34 ..     168     196 ..     165     196 .. 0.95
   2 ?   -1.8   0.0      0.93   2.8e+03      23      33 ..     226     236 ..     207     237 .. 0.56
   3 ?    0.9   0.0      0.13   3.8e+02       6      29 ..     300     325 ..     297     326 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00038
  PheRS_DBD1   6 aeqlLqrLekkgevdslelAaelgvdHqk 34 
                 ++qlL+ L++  ++ + ++A++ ++ Hq+
  KHJ30893.1 168 PQQLLDVLSQMKTLATTDAAKATELLHQA 196
                 69*************************96 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.93
  PheRS_DBD1  23 elAaelgvdHq 33 
                   Aa+  ++Hq
  KHJ30893.1 226 TTAAAAPINHQ 236
                 34556666666 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.13
  PheRS_DBD1   6 aeqlLqrLek..kgevdslelAaelg 29 
                 +eql+q++ +  ++ +d+l +A++++
  KHJ30893.1 300 TEQLMQQVLAmpQELIDTLPVAERNQ 325
                 6888888888766778***9999876 PP

>> DUF3198  Protein of unknown function (DUF3198)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.069   2.1e+02      13      22 ..       6      15 ..       3      17 .. 0.89
   2 ?    6.7   0.0    0.0022       6.5       6      33 ..      53      80 ..      51      88 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.069
                --HHHHHHHH CS
     DUF3198 13 dSKstFvknl 22
                +SKs+Fv n+
  KHJ30893.1  6 PSKSVFVGNI 15
                7******997 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0022
                HHHHHHS--HHHHHHHHHHHHHHHHHH- CS
     DUF3198  6 FeelInSdSKstFvknlkeLekiarklG 33
                F e   SdS s  v+nl++ e++ rkl 
  KHJ30893.1 53 FVEFPDSDSASSAVRNLNDYEIMNRKLR 80
                667778*******************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       713  (0.039768); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2602.17
//
Query:       KHJ30894.1  [L=400]
Description: putative atp-dependent rna helicase eif4a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-46  157.2   0.7    5.4e-46  156.6   0.7    1.3  1  DEAD             DEAD/DEAH box helicase
    6.2e-31  107.0   0.1    3.7e-30  104.5   0.0    2.3  3  Helicase_C       Helicase conserved C-terminal domain
    1.7e-06   28.2   0.0    2.7e-06   27.5   0.0    1.3  1  ResIII           Type III restriction enzyme, res subunit
    0.00069   19.4   0.1     0.0016   18.2   0.1    1.6  1  AAA_30           AAA domain
     0.0012   19.2   0.5     0.0085   16.4   0.2    2.2  2  AAA_19           AAA domain
  ------ inclusion threshold ------
       0.01   15.9   0.0      0.026   14.6   0.0    1.6  1  IL17R_D_N        N-terminus of interleukin 17 receptor D
      0.017   15.4   0.2      0.066   13.5   0.2    2.0  1  AAA_22           AAA domain
      0.026   13.9   0.0       0.06   12.7   0.0    1.6  1  CMS1             U3-containing 90S pre-ribosomal complex subu
       0.11   12.5   0.1       0.42   10.6   0.1    2.1  1  Flavi_DEAD       Flavivirus DEAD domain
       0.12   12.1   0.0       0.33   10.7   0.0    1.6  1  fragilysinNterm  N-terminal domain of fragilysin


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.6   0.7     3e-49   5.4e-46       2     174 ..      52     215 ..      51     217 .. 0.96

  Alignments for each domain:
  == domain 1  score: 156.6 bits;  conditional E-value: 3e-49
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdi 100
                 +iQ++ai  +++g+dv+++a+ G+GKT+ f+i vlq++ e  + ++ +ali++PtreLa+q+ + +  ++++++++++++igg++ rd++++l+ g+++
  KHJ30894.1  52 AIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKL-E-PNLKQCQALILAPTRELAQQIQKVVVAIGDFMNVECHACIGGTSVRDDMKALQDGPQV 148
                 79************************************.4.799999**********************************************999*** PP

                 EEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 101 vvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvk 174
                 vvgtpgr++d+++++ l++++++++VlDEad++l+ gf d+i  i++ l       +++ qv++lSAT+p+dv 
  KHJ30894.1 149 VVGTPGRVHDMIQRRFLKTDSIKMFVLDEADEMLSRGFTDQIYDIFQLL-------PQSTQVVLLSATMPHDVL 215
                 *************************************************.......45567*********8885 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0         2   3.5e+03      12      32 ..      91     112 ..      83     153 .. 0.61
   2 ?   -1.6   0.0       1.9   3.4e+03      32      70 ..     194     229 ..     143     234 .. 0.59
   3 !  104.5   0.0     2e-33   3.7e-30       2     111 .]     253     361 ..     252     361 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2
                 HTTTTSEEEEEESSHHHHHH.H CS
  Helicase_C  12 leeeggkilifvntidrlek.v 32 
                  + ++ ++li ++t++ +++  
  KHJ30894.1  91 PNLKQCQALILAPTRELAQQiQ 112
                 5567888899999998554331 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.9
                 HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEE CS
  Helicase_C  32 vklllekkgikvavlhgelpqnereeileqfnkgesdvL 70 
                 ++ll   ++ +v+ l + +   + +e+ ++f ++ +++L
  KHJ30894.1 194 FQLL--PQSTQVVLLSA-TMPHDVLEVTTRFMRDPVRIL 229
                 2333..33444444444.333445566666655555555 PP

  == domain 3  score: 104.5 bits;  conditional E-value: 2e-33
                 HHHHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHH CS
  Helicase_C   2 kleallellkleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvts 99 
                 kl++l +l+ +++   +++if+nt+++++  ++ l + ++++v ++hg++ q +r+ i+++f++g+s+vLiatd ++rGid+++v+lVin+dlp n ++
  KHJ30894.1 253 KLDTLSDLY-ETVTITQAVIFCNTRRKVDWlTDKL-TARDFTVSAMHGDMDQLQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANREN 349
                 667777776.788999************7665555.3458*********************************************************** PP

                 HHHHHTTSSSTT CS
  Helicase_C 100 yiqriGRtgRag 111
                 yi+riGR gR+g
  KHJ30894.1 350 YIHRIGRGGRFG 361
                 **********86 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.0   1.5e-09   2.7e-06      25     170 ..      65     211 ..      45     212 .. 0.76

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 1.5e-09
                 SEEEEEESTTSTHHHHH.HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG.........GEEEESSS-B--.......-SEEEEEHHHHHHT CS
      ResIII  25 krglikmaTGtGKTlva.aklierllkkgkeekflflvprkslleqtleefkkflseayke.....igkkvsgdkkkakekdstnkkilvttiqsldad 117
                 + ++ ++  GtGKT +  +++ ++l  + k+ ++l+l+p+++l +q ++ +  + +  + e      g++v++d k      ++  +++v t  +++  
  KHJ30894.1  65 HDVIAQAQSGTGKTATFsISVLQKLEPNLKQCQALILAPTRELAQQIQKVVVAIGDFMNVEchaciGGTSVRDDMKAL----QDGPQVVVGTPGRVHDM 159
                 56889999********99************99****************555444444433333353444455555555....999************** PP

                 H........HHHTTT-SEEEEETGGGTTS.TTTHHHHHT-....--SEEEEEESS-S CS
      ResIII 118 seeeeeeseellrdrfdviiiDEaHrlgakkswreilekf....keavllglTATpe 170
                 +     ++  l+ d++++++ DEa  + +  +  +i + f    ++  ++ l+AT++
  KHJ30894.1 160 I-----QRRFLKTDSIKMFVLDEADEMLSRGFTDQIYDIFqllpQSTQVVLLSATMP 211
                 *.....77888889999*******999997666667666633444477778899976 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.1   9.1e-07    0.0016       5     114 ..      53     199 ..      50     208 .. 0.62

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 9.1e-07
      AAA_30   5 eQaaavealltsgdrvavltGpAGtGKtta..lkalreaweaa.ggrviglAptgkaAkvLae...............elgieastiakllkrlk.... 81 
                  Q++a+  +++++d  +++++  GtGKt +  +++l+++  +  + + ++lApt + A+++++                  i +               
  KHJ30894.1  53 IQQRAIMPVIKGHD--VIAQAQSGTGKTATfsISVLQKLEPNLkQCQALILAPTRELAQQIQKvvvaigdfmnvechaC--IGGT---------Svrdd 138
                 59999999999998..99*********86511677788888887799***************64443333333322211..2222.........12222 PP

      AAA_30  82 ........................grarlepgtllivDEagmv....dtkqlaallkaaek 114
                                         +  + ++ ++++ DEa  +     t+q+ ++++ + +
  KHJ30894.1 139 mkalqdgpqvvvgtpgrvhdmiqrRFLKTDSIKMFVLDEADEMlsrgFTDQIYDIFQLLPQ 199
                 2233355677777777777777654344455588888888644344335555555555555 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.2   4.7e-06    0.0085       1      65 [.      54     118 ..      54     213 .. 0.71
   2 ?    0.6   0.0      0.37   6.6e+02      40      75 ..     264     299 ..     245     357 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 4.7e-06
      AAA_19   1 qreave.alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaal 65 
                 q++a+   +k + ++  a  GtGKT +    v   +e + +k  + l++a+t+  a+++++ + a+
  KHJ30894.1  54 QQRAIMpVIKGHDVIAQAQSGTGKTATFSISVLQKLEPN-LKQCQALILAPTRELAQQIQKVVVAI 118
                 7888877999999999***********987665555444.556899*************9988444 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.37
      AAA_19  40 vkpeeillvaftgrAakelrerlaalgaeatTiHrl 75 
                 v   + ++ + t+r ++ l+++l+a +   + +H+ 
  KHJ30894.1 264 VTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGD 299
                 556788999999999999999996666666666643 PP

>> IL17R_D_N  N-terminus of interleukin 17 receptor D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   1.5e-05     0.026      67     107 ..      85     125 ..      69     129 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.5e-05
   IL17R_D_N  67 ileelksegkqcqqlvlkdPkqlnfsfkevklesqpflnlk 107
                 +l++l+++ kqcq l+l   ++l  + ++v++    f+n++
  KHJ30894.1  85 VLQKLEPNLKQCQALILAPTRELAQQIQKVVVAIGDFMNVE 125
                 68999********************************9986 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.2   3.7e-05     0.066      12     130 ..      71     210 ..      67     217 .. 0.60

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.7e-05
      AAA_22  12 GesGtGKTtllrrlleqldeeakaee.............erpevvfvtlpsstsskdllrellralglelka....................erlssee 77 
                 ++sGtGKT +    + q+  e++ ++             +               +++  ++  ++++e++a                      ++  +
  KHJ30894.1  71 AQSGTGKTATFSISVLQKL-EPNLKQcqalilaptrelaQ-------------QIQKVVVAIGDFMNVECHAciggtsvrddmkalqdgpqvVVGTPGR 155
                 5789999988888777763.23333333333333333330.............5555555555555555555555555555555555433333445666 PP

      AAA_22  78 llealeqalraravielliiDEaqh.lrseealeeLrsllnl..srkgvqliLvGt 130
                 + +++++ + +++ i+++++DEa+  l s     ++ +++ l  ++++v l+ + +
  KHJ30894.1 156 VHDMIQRRFLKTDSIKMFVLDEADEmL-SRGFTDQIYDIFQLlpQSTQVVLLSATM 210
                 666777777777779**********77.8777777777777755566666655555 PP

>> CMS1  U3-containing 90S pre-ribosomal complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.3e-05      0.06     180     209 ..     148     177 ..     135     187 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.3e-05
        CMS1 180 iavGtpgRildLleeeslsvdeLkrivlDa 209
                 + vGtpgR+ d+++   l+ d++k  vlD 
  KHJ30894.1 148 VVVGTPGRVHDMIQRRFLKTDSIKMFVLDE 177
                 789*************************96 PP

>> Flavi_DEAD  Flavivirus DEAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00024      0.42       7      53 ..      67     115 ..      61     218 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00024
                 EEEE--TTS-TTTTHHHHHHHHHH..HTT--EEEEESSHHHHHHHHHHT CS
  Flavi_DEAD   7 tvldlhPGaGktrkvlpelvkeai..errlrtlvLaPtrvvlaemeeal 53 
                  + ++  G+Gkt  +  +++++     ++ ++l+LaPtr  ++ +++ +
  KHJ30894.1  67 VIAQAQSGTGKTATFSISVLQKLEpnLKQCQALILAPTRELAQQIQKVV 115
                 5667889*******99999987651157889********9999887754 PP

>> fragilysinNterm  N-terminal domain of fragilysin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00018      0.33      77     106 ..     359     388 ..     357     397 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00018
  fragilysinNterm  77 rlqrnGelidyivykekermaeiaeyyaah 106
                      r+ r G  i++++  + ++m ei ++y+++
       KHJ30894.1 359 RFGRKGVAINFVTADDVRMMREIEQFYSTQ 388
                      899************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 3113.88
//
Query:       KHJ30895.1  [L=647]
Description: putative prolyl oligopeptidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-40  138.4   0.0    3.5e-40  137.8   0.0    1.3  1  Peptidase_S9   Prolyl oligopeptidase family
    0.00012   21.9   0.1       0.86    9.6   0.1    2.9  2  PD40           WD40-like Beta Propeller Repeat
     0.0006   18.6   0.1      0.029   13.1   0.1    2.1  1  AXE1           Acetyl xylan esterase (AXE1)
  ------ inclusion threshold ------
      0.045   13.4   0.1       0.16   11.6   0.1    1.8  1  Esterase       Putative esterase
       0.11   11.2   0.0       0.17   10.6   0.0    1.1  1  Peptidase_S28  Serine carboxypeptidase S28
       0.15   11.2   0.0       0.25   10.5   0.0    1.2  1  DUF2920        Protein of unknown function (DUF2920)


Domain annotation for each model (and alignments):
>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.8   0.0   1.2e-43   3.5e-40       1     169 [.     479     647 .]     479     647 .] 0.97

  Alignments for each domain:
  == domain 1  score: 137.8 bits;  conditional E-value: 1.2e-43
                   ----HHHHHHHCCT-EEEEE--TTSSTTHCHHHHTTSGGGGHHHHHHHHHHHHHHHHTT.S--GGGEEEEEETHHHHHHHHHHH.H-GGG-SEEEEE CS
  Peptidase_S9   1 psfsselqlladrGyvvvvanirGsggyGeafhdagkrklgqnefdDfiaaaealakeg.yvdserlaitGgSyGGyltgaaln.qrpdlFkaavae 95 
                   +s++++++++a++Gyvvv +n++Gs+gyG af++ +k+++g + + D+++++e++ +e+ +vd++r ++ G+SyGGy+++++++ + +++Fka+v +
    KHJ30895.1 479 WSTRWNPAVFAEQGYVVVTPNPTGSTGYGMAFQNGIKNNWGGRPYIDLVKGIEYIEAEFpFVDTSRAVALGASYGGYMVNWIQGhELGRKFKALVTH 575
                   7889********************************************************************************999********** PP

                   SE---CCCHHCSTTSTHHHCCCC--TTTCHHHHHHHHHH-CGGG-----EEEEEEETT-SSS-THHHHHHHHHH CS
  Peptidase_S9  96 vpvvdvlrydsdtdllteeymewgnpeeneegykelspyspldnvkaypplLlihGlaDdrvppaealklvaaL 169
                   ++v+  l++  +++l+ +++++ g  +en++ y+++ p++ l+n  + +p L+ih ++D+r p++e+l  ++ L
    KHJ30895.1 576 DGVFSTLNQVASDELFFPHHDFGGPLWENRDIYEKWDPARFLRN--WATPHLIIHNELDYRLPISEGLATFNVL 647
                   ************999777788889999*****************..**********************998866 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.1   0.00029      0.86       9      30 ..     270     291 ..     269     298 .. 0.85
   2 !    9.0   0.0   0.00046       1.4      13      36 ..     332     354 ..     331     356 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00029
                 S.EEEEEE-TTSSEEEEEEECT CS
        PD40   9 gnegaPsfSPDGkrlaFsSdRg 30 
                 g+   P fSPD k+ +F++ ++
  KHJ30895.1 270 GYSNYPVFSPDAKSVVFTRMKS 291
                 67789*************9877 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00046
                 EEEE-TTSSEEEEEEECT.TCEEE CS
        PD40  13 aPsfSPDGkrlaFsSdRgsGkpdI 36 
                 ++++S DGk l+ + + + G+  +
  KHJ30895.1 332 SITWSLDGKFLYVTAEES-GRGKL 354
                 79*************999.76555 PP

>> AXE1  Acetyl xylan esterase (AXE1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.1   9.6e-06     0.029      48     187 ..     424     556 ..     414     581 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 9.6e-06
                 --S-SSEEEEEEEEEEGGGEEEEEEEEEES...SSSSEEEEEEEE-TT--GGGHHHHHHHHHTT-EEEEEE-TTTS..SSB-SSCCSS-SSSS.TTTTT CS
        AXE1  48 dfelkavkvydltfegvrgarikaklvlPke..keeklPavvefhGYegsrgeihdllnyaaaGyavvvmdvRGqggesedkvgskgnkakGf.iirGl 143
                 +f l++ +v ++ f+g ++  ++a++++P++  k++k P+    hG  +++++ +    +  a +        G    + +++gs+     G     G+
  KHJ30895.1 424 SFGLSKTQVDEIWFRGAEDYLVHAWVLKPSSfdKSKKYPLAYLIHGGPQGAWNDSWSTRWNPAVF-----AEQGYVVVTPNPTGST---GYGMaFQNGI 514
                 56778888889999999999999999999862256777777666765554443333333332222.....2233333333343333...2222023444 PP

                 TSTTT-HHHHHHHHHHHHHHHH.HTSTTEEEEEEEEEEETHHHHH CS
        AXE1 144 ldkeklyyrrvflDavrlveiv.aslpevDeeRvavlGasqGGal 187
                     + +  r ++D v+ +e + a++p+vD +R ++lGas GG +
  KHJ30895.1 515 K---NNWGGRPYIDLVKGIEYIeAEFPFVDTSRAVALGASYGGYM 556
                 3...334557799****999773579***************9966 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   5.3e-05      0.16       9     153 ..     446     582 ..     443     622 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 5.3e-05
                 EEEEEE.CC.GGTTTEEEEEEE--T......THHCCHHHHHCHHCCCCHCCT.EEEEEECCCSS-TTTTTSBTTSBB.TTEEETTCCCCCCHCHHHHTH CS
    Esterase   9 kvqvyLPedyspgrkypvvylldGl......tgwdqnfrakelleslaregeiaeviivvvprggessfysdwdlgarfyenategpgaeayetfltqe 101
                 + +v+ P+++++++kyp+ yl +G       ++w++ ++   +     ++g      +vv p+   s   + +     f++  +++ g + y + ++  
  KHJ30895.1 446 HAWVLKPSSFDKSKKYPLAYLIHGGpqgawnDSWSTRWNPAVFA----EQG-----YVVVTPNPTGS---TGYG--MAFQNGIKNNWGGRPYIDLVKG- 529
                 678999******************88844444444444444333....443.....44555554444...2233..4477777777778888888876. PP

                 HHHHHHHHCSEECCC.EEEEEETHHHHHHHHHHHC.STTTCCEEEEES--S-CC CS
    Esterase 102 Llplldanfrtapdg.ravaGqSmGGlgALilalk.hpdrFgsvssfSpivnps 153
                    +++a+f++ +++  +++G+S GG++  ++  +    +F+    + ++ ++ 
  KHJ30895.1 530 -IEYIEAEFPFVDTSrAVALGASYGGYMVNWIQGHeLGRKFKALVTHDGVFSTL 582
                 .79********999956667******9876665553556666666666665555 PP

>> Peptidase_S28  Serine carboxypeptidase S28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   5.7e-05      0.17      95     131 ..     525     561 ..     521     564 .. 0.94

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 5.7e-05
  Peptidase_S28  95 DlasfikalkqkfklsssskwitfGgSYsgsLaawar 131
                    Dl++ i+ ++++f   + s+ ++ G+SY+g ++ w++
     KHJ30895.1 525 DLVKGIEYIEAEFPFVDTSRAVALGASYGGYMVNWIQ 561
                    99999******************************86 PP

>> DUF2920  Protein of unknown function (DUF2920)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   8.4e-05      0.25     154     197 ..     517     560 ..     509     575 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 8.4e-05
     DUF2920 154 nfGimaAlDiinalkdlvkrfpkeadlpviliGgsyGGYlalLi 197
                 n+G    +D++  ++++   fp+      +  G+syGGY+ + i
  KHJ30895.1 517 NWGGRPYIDLVKGIEYIEAEFPFVDTSRAVALGASYGGYMVNWI 560
                 56666679****************99*************98866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (647 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       349  (0.0194657); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.39
# Mc/sec: 5030.36
//
Query:       KHJ30896.1  [L=320]
Description: hypothetical protein EV44_g3277 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.76   10.3  11.7       0.16   12.4   6.8    2.2  2  DUF16     Protein of unknown function DUF16
        5.7    7.4  11.1        6.8    7.1   0.1    2.5  2  NUC       Nuclease domain


Domain annotation for each model (and alignments):
>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   6.8   1.8e-05      0.16      25      87 ..      32     109 ..      25     124 .. 0.79
   2 ?   -0.5   0.3      0.19   1.7e+03      26      55 ..     138     168 ..     114     195 .. 0.52

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.8e-05
                 HHHB-............BHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH............HHHH CS
       DUF16  25 lnefkds..........nkqrLkkieakvdklgeqinkleqkvekqgekikelkveqkaqgeeln.....kvdetlel 87 
                 l+e kd           n++r++  e+++ kl+ +i +leq+ +k+ +  ++ k+eq aq  el+     +  etl+l
  KHJ30896.1  32 LDELKDHdkkrislletNQNRFEAGEDRILKLEAKITQLEQEHNKKMQAWEKFKNEQRAQTTELKlqifmHATETLKL 109
                 567776666677777778899999999999********************************9998885544444443 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.19
                 HHB-..BHHHHHHHHHHHH....HHHHHHHH CS
       DUF16  26 nefkdsnkqrLkkieakvdklg.eqinkleq 55 
                  e k+sn  +L+   ++++  g  q+++l +
  KHJ30896.1 138 SENKNSNIRHLRSHCQTINEDGrSQVAELGK 168
                 3344444444444444444333123444444 PP

>> NUC  Nuclease domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   6.6     0.025   2.3e+02      27     109 ..      47     131 ..      25     163 .. 0.72
   2 ?    7.1   0.1   0.00076       6.8       5      38 ..     241     274 ..     238     282 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.025
         NUC  27 kfdsirynaekd.yFefafdykkftkkaegsrkkWtvctngeRieykrkkkknkklesekinlteelkellekagidykkdd.lk 109
                 + ++ r++a +d + +++ ++++ +++++++ + W+ + n++R ++++ k +   + +e+++l e  k + e++++  ++++ + 
  KHJ30896.1  47 ETNQNRFEAGEDrILKLEAKITQLEQEHNKKMQAWEKFKNEQRAQTTELKLQIFMHATETLKLDEICKIMKERVSMTTSENQdMT 131
                 455667777555267999999**************************99999998888889888877777777777666664443 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.00076
         NUC   5 TGFvnllktkyenvekakefikkfdsirynaekd 38 
                 T Fvn + + ++n + +++fi+++++i+ +++k+
  KHJ30896.1 241 TEFVNSFIKGISNYKAREKFIAHLQQIYPSKQKK 274
                 88*************************9877664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2279  (0.127112); expected 358.6 (0.02)
Passed bias filter:                      606  (0.0338); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.22s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 2511.69
//
Query:       KHJ30897.1  [L=1189]
Description: putative glycosyltransferase family 2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   8.3e-286  948.7   0.5   1.2e-285  948.2   0.0    1.4  2  Chitin_synth_2   Chitin synthase
      3e-14   53.4   1.8    9.2e-14   51.8   1.8    1.9  1  Glyco_trans_2_3  Glycosyl transferase family group 2
    3.4e-11   43.5   0.0    2.4e-09   37.4   0.0    2.4  2  Glyco_tranf_2_3  Glycosyltransferase like family 2
    0.00077   19.0   0.0     0.0042   16.6   0.0    1.9  2  Glyco_transf_21  Glycosyl transferase family 21
  ------ inclusion threshold ------
      0.011   15.5   0.0      0.096   12.5   0.0    2.3  2  Glycos_transf_2  Glycosyl transferase family 2
      0.028   13.8   0.1       0.05   13.0   0.1    1.3  1  DUF639           Plant protein of unknown function (DUF639)


Domain annotation for each model (and alignments):
>> Chitin_synth_2  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1      0.79   2.4e+03     462     504 ..     490     533 ..     481     539 .. 0.69
   2 !  948.2   0.0  3.9e-289  1.2e-285       3     527 .]     641    1164 ..     639    1164 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.79
  Chitin_synth_2 462 llvyllalPifnfvlPlyafwhld.dfswGetrvveGekkkkaa 504
                      l ++l++ + +fvl l   w +   fs  +t + +  kk++ +
      KHJ30897.1 490 SLFFILSIVLSKFVLALLFQWFFSrKFSASKTSQSSDTKKRNRQ 533
                     35688999999999999888887536888888777666655544 PP

  == domain 2  score: 948.2 bits;  conditional E-value: 3.9e-289
  Chitin_synth_2    3 tiiaksvaalqlidkrslefqlkfticlvtaysegeeglrttldslastdyddkrklllvvcdGlikGsGndkstPeivldllkdavspkedv 95  
                       +i++ v++++++d+++++++l++ticlvtaysege g+rtt+ds+a+tdy++++k++lv+cdG+i+G+G+ kstP+++l+++kd+ +p ++v
      KHJ30897.1  641 GFIHDIVVPQPPADWQPFGYPLAHTICLVTAYSEGELGIRTTIDSIATTDYPNSHKIILVICDGIITGKGEAKSTPDVILGMIKDHAIPPDQV 733 
                      689999*************************************************************************************** PP

  Chitin_synth_2   96 eplsyvavaeGskrhnkakvyaGfyeyeddstvpeekqqrvPlivvvkvGtpseasekkPGnrGkrdsqiilmsflekvtfdermteleyelf 188 
                       ++syvav+ Gskrhn+akvy+Gfy+y  +s +p ekqq vP++ +vk+Gtp+ea+++kPGnrGkrdsqiilmsfl+kv+fdermtele+e+f
      KHJ30897.1  734 PAFSYVAVSTGSKRHNMAKVYSGFYDYGPNSPIPLEKQQSVPMMCIVKCGTPDEAKNSKPGNRGKRDSQIILMSFLQKVMFDERMTELEFEMF 826 
                      ********************************************************************************************* PP

  Chitin_synth_2  189 kkikkviGvspdfyeivlmvdadtkvapdsltrlvaalvkdpeilglcGetkiankkeswvtaiqvfeyyishhlskafesvfGsvtclPGcf 281 
                      + ++k++G+spdfyeivlmvdadtkv+pdslt++++a+vkdpei+glcGetkiank+ swv++iqvfey+ishhlsk+fesvfG+vtclPGcf
      KHJ30897.1  827 NGLWKITGISPDFYEIVLMVDADTKVYPDSLTHMISAMVKDPEIMGLCGETKIANKRASWVSMIQVFEYFISHHLSKSFESVFGGVTCLPGCF 919 
                      ********************************************************************************************* PP

  Chitin_synth_2  282 slyrikaakgadgkwvPilvspeiveeysenvvdtlhkknllllGedrylttlllktfpkrktvfvpqakcktvaPdtfkvllsqrrrwinst 374 
                      ++yrika+kg++++wvPil++p++ve+ysenvvdtlhkknllllGedryl+tl+l+tfpkrk+vfvpqa+ckt++P++f+vllsqrrrwinst
      KHJ30897.1  920 CMYRIKAPKGGQNYWVPILANPDVVEHYSENVVDTLHKKNLLLLGEDRYLSTLMLRTFPKRKQVFVPQAVCKTTVPEEFMVLLSQRRRWINST 1012
                      ********************************************************************************************* PP

  Chitin_synth_2  375 vhnllelvlvrdlcGtfcfsmrfvvfieligtvvlPvaiaftlylivasilksklvpviplvllaivlGlpailivltarkleyvawllvyll 467 
                      +hnl+elv vrdlcGtfcfsm+fvv ieligt+vlP+ai ft+y++++si++ ++ ++iplvlla++lGlp++livlta++l+yv w+l+yll
      KHJ30897.1 1013 IHNLMELVFVRDLCGTFCFSMQFVVAIELIGTLVLPAAISFTIYVVIISIIH-SPPQIIPLVLLALILGLPGVLIVLTAHRLSYVIWMLIYLL 1104
                      ***************************************************9.99************************************** PP

  Chitin_synth_2  468 alPifnfvlPlyafwhlddfswGetrvveGekkkkaageaegefdsskivlkrfeefere 527 
                      +lPi+nfvlP+yafw++ddfswG+tr+++Gek+kka  e+egefdsski++kr+ efe+e
      KHJ30897.1 1105 SLPIWNFVLPTYAFWKFDDFSWGDTRKTDGEKTKKAGIEYEGEFDSSKITMKRWGEFEKE 1164
                      **********************************************************96 PP

>> Glyco_trans_2_3  Glycosyl transferase family group 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.8   1.8   3.1e-17   9.2e-14       1     156 [.     842    1078 ..     842    1121 .. 0.68

  Alignments for each domain:
  == domain 1  score: 51.8 bits;  conditional E-value: 3.1e-17
  Glyco_trans_2_3    1 iilllDaDtvlppdclreiaaela.spevaivqgpvlvm.nvanwleelaalffaedhgkdilvrealgrvvpsvGsgaflrrsalq..... 85  
                       i+l++DaDt + pd+l   ++ +  +pe+  ++g + ++  +a+w++ ++++++ ++h  + ++ + +g+v+ ++G  ++ r++a +     
       KHJ30897.1  842 IVLMVDADTKVYPDSLTHMISAMVkDPEIMGLCGETKIAnKRASWVSMIQVFEYFISHHLSKSFESVFGGVTCLPGCFCMYRIKAPKggqny 933 
                       799***************99977758*********99874789***********99*****************************9999899 PP

  Glyco_trans_2_3   86 ........evg..........gwdgdessvsEDfdmglrlqrkG..yrvrfvpeslvkekspltlraalrQrkRwayGc..eleklil.... 151 
                               +v+            + +   ++ED +++  ++r     + +fvp++++k+ +p +++  l Qr+Rw+     +     l    
       KHJ30897.1  934 wvpilanpDVVehysenvvdtLHKKNLLLLGEDRYLSTLMLRTFpkRKQVFVPQAVCKTTVPEEFMVLLSQRRRWINSTihN-----Lmelv 1020
                       99888888333444444345433344559*****999888877777999*****************************6552.....02333 PP

  Glyco_trans_2_3  152 .....................................................lvrll 156 
                                                                            l+ l+
       KHJ30897.1 1021 fvrdlcgtfcfsmqfvvaieligtlvlpaaisftiyvviisiihsppqiiplvLLALI 1078
                       3455555666666755555555554445544444444443333333333332211111 PP

>> Glyco_tranf_2_3  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.019        58       3      52 ..     664     722 ..     661     757 .. 0.62
   2 !   37.4   0.0   8.1e-13   2.4e-09      88     228 ..     840    1009 ..     817    1011 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.019
  Glyco_tranf_2_3   3 dlavlVptfneed.vlgevlesllaqeyprvevvvvv........desdaetlevaeel 52 
                      ++++lV+++ e +  ++ +++s+++ +yp+++ ++ v         ++ ++t +v+ ++
       KHJ30897.1 664 HTICLVTAYSEGElGIRTTIDSIATTDYPNSHKIILVicdgiitgKGEAKSTPDVILGM 722
                      689********9988889******99997744333332346665555556666766655 PP

  == domain 2  score: 37.4 bits;  conditional E-value: 8.1e-13
  Glyco_tranf_2_3   88 sdlvllvDdDtvvePdtlkrllqffltpkvgavgtpvfl...lnrstlvsalgalefaerhlrflaarralg.vltlnGsgslirrevlkel 175 
                       +++vl+vD+Dt v Pd+l  +  ++  ++++++g + ++   + r ++vs+ + +e+ + h+   ++   +g v++l G ++++r +  k  
       KHJ30897.1  840 YEIVLMVDADTKVYPDSLTHMISAM-VKDPEIMGLCGETkiaNKRASWVSMIQVFEYFISHHLSKSFESVFGgVTCLPGCFCMYRIKAPKGG 930 
                       679**************99999998.55556666555442224599*********9999999999999999769***********9998888 PP

  Glyco_tranf_2_3  176 e.......................gldp.lflltdDyelglrlrr..agfrtayvpgaavrevfpsslkayikqrnRwv 228 
                       +                       ++ + l ll++D  l+  + r   + + ++vp+a++ ++ p+++  +  qr+Rw+
       KHJ30897.1  931 QnywvpilanpdvvehysenvvdtLHKKnLLLLGEDRYLSTLMLRtfPKRKQVFVPQAVCKTTVPEEFMVLLSQRRRWI 1009
                       899*******************9655558999999986665555548899999*************************7 PP

>> Glyco_transf_21  Glycosyl transferase family 21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.4e-06    0.0042      29     109 ..     838     923 ..     829     926 .. 0.79
   2 ?   -0.4   0.0      0.24     7e+02     126     172 ..     963    1009 ..     962    1010 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.4e-06
  Glyco_transf_21  29 akydllvisDsdvrvkpdyLeellaaled.pkvglVtslpvgsdakglaaaleaaflntl.agvlqa...klsglgfavGksmalr 109
                        y+++++ D+d+ v pd L+++  a+ + p++  +++    ++++  +  + ++f ++  + + ++    ++g+ +  G ++++r
       KHJ30897.1 838 DFYEIVLMVDADTKVYPDSLTHMISAMVKdPEIMGLCGETKIANKRASWVSMIQVFEYFIsHHLSKSfesVFGGVTCLPGCFCMYR 923
                      5699*******************988754499999999999999998999999999865524455555435689999999999988 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.24
  Glyco_transf_21  126 LAeDyalgkllraa..GlkvvlspapiaqtsvprrsslrallaRqlrWa 172 
                       L eD  l++l+ +     k v++p+++++t vp+   +  ll++  rW 
       KHJ30897.1  963 LGEDRYLSTLMLRTfpKRKQVFVPQAVCKTTVPE--EFMVLLSQRRRWI 1009
                       6688777777777767889999**********96..5777999999996 PP

>> Glycos_transf_2  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.31   9.4e+02       4      32 ..     669     698 ..     667     704 .. 0.74
   2 ?   12.5   0.0   3.2e-05     0.096      81     164 ..     841     925 ..     833     928 .. 0.69

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.31
                      EEESS-.TTTHHHHHHHHHHHGGCCEE.EEE CS
  Glycos_transf_2   4 iptyNe.ektlletlesllaqdpypdf.eii 32 
                      +++y e e  ++ t++s++   +yp+  +ii
       KHJ30897.1 669 VTAYSEgELGIRTTIDSIATT-DYPNShKII 698
                      899***9*************9.444430333 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 3.2e-05
                      SEEEEEESSEEE-TTHHHHHHHHHHH.TTCEEEEEEEEEECCCCCCCHC-SS..EEEECCHC.CCCHCCCCCCSTTCSTCCCEEEEH CS
  Glycos_transf_2  81 dyilflDaDdepdpdwleklvealekdgadvvlgqrprifgetdeiernkrv..generlyf.kerkrslkgnlsfeigsaallrre 164
                      +++l +DaD+ + pd l  ++ a+ kd++  ++g    ++  +++ ++ + +  +e  +  +  +   s +g++++  g+++++r +
       KHJ30897.1 841 EIVLMVDADTKVYPDSLTHMISAMVKDPE--IMGLCGETKIANKRASWVSMIqvFEYFISHHlSKSFESVFGGVTCLPGCFCMYRIK 925
                      699***********************999..55555555555555555444444333333330334456677888888888888876 PP

>> DUF639  Plant protein of unknown function (DUF639)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   1.7e-05      0.05     148     226 ..     467     548 ..     454     552 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.7e-05
      DUF639 148 lLklRalllskapqaaskvalamlvlatvlavvPfkyllafvlvelftresegrkes....veklnrrlrewWesiPaaPvvv 226
                 ++k+ ++ +     +askv+ + ++l  +l +v  k++la+ +   f r+ ++ k+s    ++k nr++ ew + i  aP ++
  KHJ30897.1 467 IIKVGSVDTESVGCIASKVV-LYVSLFFILSIVLSKFVLALLFQWFFSRKFSASKTSqssdTKKRNRQIEEWSDDIFRAPQRI 548
                 56666777777777888875.5689999********************99885554422337899*********999999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       717  (0.0399911); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.78u 0.27s 00:00:01.05 Elapsed: 00:00:00.41
# Mc/sec: 8719.15
//
Query:       KHJ30898.1  [L=691]
Description: putative protoplast regeneration and killer toxin resistance protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-36  123.7  22.2    1.3e-05   25.7   0.0    7.7  7  Sel1      Sel1 repeat
  ------ inclusion threshold ------
      0.016   15.8   1.5        7.1    7.5   0.0    4.5  4  TPR_6     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.5   2.6e-05      0.23       1      38 []     381     418 ..     381     418 .. 0.88
   2 !   23.0   0.2     1e-08   9.1e-05       5      38 .]     423     454 ..     419     454 .. 0.93
   3 !   14.9   0.0   3.7e-06     0.033       2      36 ..     456     488 ..     455     490 .. 0.86
   4 !   21.2   0.1   3.8e-08   0.00034       3      38 .]     496     531 ..     494     531 .. 0.89
   5 !   19.2   0.0   1.6e-07    0.0014       1      38 []     532     568 ..     532     568 .. 0.95
   6 !   16.9   1.9   8.3e-07    0.0074       2      37 ..     570     605 ..     569     606 .. 0.86
   7 !   25.7   0.0   1.4e-09   1.3e-05       1      38 []     607     642 ..     607     642 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.6e-05
        Sel1   1 aeAmyrLGmfylylnGlg.vpk.DpekAiewyekAAeqGd 38 
                 ++A+y L+    y  Gl    k D++ A+ ++  A ++G+
  KHJ30898.1 381 PYAQYYLA--DGYASGLFnKGKeDYSTAFPLFVAASKHGH 418
                 68******..888****544445****************8 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 1e-08
        Sel1   5 yrLGmfylylnGlgvpkDpekAiewyekAAeqGd 38 
                 yr +  ++y++G g  kDp kA+++++++A++++
  KHJ30898.1 423 YRAA--LCYEFGWGCRKDPAKAVQFFRQSASKNH 454
                 999*..999**********************998 PP

  == domain 3  score: 14.9 bits;  conditional E-value: 3.7e-06
        Sel1   2 eAmyrLGmfylylnGl.gvpkDpekAiewyekAAeq 36 
                  Am rLG  ++ l G+ g+ k ++++++w+++A e 
  KHJ30898.1 456 GAMTRLG--QACLSGDlGLNK-YREGVKWLKRATES 488
                 59*****..999****55777.***********885 PP

  == domain 4  score: 21.2 bits;  conditional E-value: 3.8e-08
        Sel1   3 AmyrLGmfylylnGl.g.vpkDpekAiewyekAAeqGd 38 
                 A y LG  +l+++G  + + +D+  A +++ +AA++G+
  KHJ30898.1 496 APYHLG--LLFETGYgDdIFRDETYAAQLFTQAADLGH 531
                 7799**..8889999635*******************9 PP

  == domain 5  score: 19.2 bits;  conditional E-value: 1.6e-07
        Sel1   1 aeAmyrLGmfylylnGlg.vpkDpekAiewyekAAeqGd 38 
                 +eA +rLG  ++y+ G    p+Dp + +++y  AA+ G+
  KHJ30898.1 532 SEASFRLG--EAYELGNLcCPRDPALSVHFYTNAAQSGH 568
                 6999****..999****88*****************998 PP

  == domain 6  score: 16.9 bits;  conditional E-value: 8.3e-07
        Sel1   2 eAmyrLGmfylylnGl.g.vpkDpekAiewyekAAeqG 37 
                  Am++L+ +y    G    ++kD+++A+ew ++AA+ G
  KHJ30898.1 570 GAMMALCAWY--IVGAePiLEKDENEAYEWARQAAACG 605
                 59*****666..9999755999*************988 PP

  == domain 7  score: 25.7 bits;  conditional E-value: 1.4e-09
        Sel1   1 aeAmyrLGmfylylnGlgvpkDpekAiewyekAAeqGd 38 
                 a A+y++G  y+ + G g+ +Dp +A  w+ kAAe+Gd
  KHJ30898.1 607 AKAQYAVG--YFTEVGIGTRPDPLEANVWFVKAAEAGD 642
                 68******..777***********************97 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0       0.1   9.2e+02      17      31 ..     366     381 ..     359     381 .. 0.85
   2 ?   -0.8   0.2      0.36   3.2e+03       1      13 [.     382     394 ..     382     407 .. 0.70
   3 ?    7.5   0.0   0.00079       7.1       4      25 ..     423     448 ..     420     456 .. 0.90
   4 ?    1.9   0.0     0.048   4.3e+02       1      13 [.     533     545 ..     533     565 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.1
                 HHHHHHHHHHHHH.-T CS
       TPR_6  17 dkAlealerlike.YP 31 
                 ++A+ +l+rl ++ YP
  KHJ30898.1 366 QEAKHILQRLANQsYP 381
                 79********999777 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.36
                 HHHHHHHHHHHHH CS
       TPR_6   1 dAlyklalsyrkl 13 
                 +A+y+la  y ++
  KHJ30898.1 382 YAQYYLADGYASG 394
                 79*****999875 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.00079
                 HHHHHHHHHH....HHHHHHHHHHHH CS
       TPR_6   4 yklalsyrkl....gdtdkAlealer 25 
                 y++al+y+ +    +d++kA++ +++
  KHJ30898.1 423 YRAALCYEFGwgcrKDPAKAVQFFRQ 448
                 9***********************98 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.048
                 HHHHHHHHHHHHH CS
       TPR_6   1 dAlyklalsyrkl 13 
                 +A ++l+++y+ +
  KHJ30898.1 533 EASFRLGEAYELG 545
                 699*******976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (691 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       838  (0.0467399); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 4925.39
//
Query:       KHJ30899.1  [L=203]
Description: hypothetical protein EV44_g0573 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1455.51
//
Query:       KHJ30900.1  [L=199]
Description: putative cell surface [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1477.34
//
Query:       KHJ30901.1  [L=544]
Description: putative transcription initiation protein spt5 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0093   15.6   0.0      0.021   14.5   0.0    1.5  1  Abhydrolase_1  alpha/beta hydrolase fold
  ------ inclusion threshold ------
      0.021   15.4   0.0      0.044   14.4   0.0    1.6  1  Abhydrolase_6  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   2.4e-06     0.021      59     107 ..     307     364 ..     247     395 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.4e-06
                    HHHHHHHH.HHHCTTSSEE.EEEETHHHHHHHHHHHHH..GGGEEEEEEESE.....C CS
  Abhydrolase_1  59 vaddldri.ldalgddklt.lvGhSmGGmialayaaey..perVkalvllga.....i 107
                    ++  +++i l++++  +    v+hS+G+ +++ ++      ++++++vl+++     +
     KHJ30901.1 307 TCSEIEQIiLNHFPPNQQFvFVAHSFGTNVVSLLLKNPatAKYINSIVLIDPipillH 364
                    55567766688887655555********************************655543 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   4.9e-06     0.044       1     104 [.     248     369 ..     248     426 .. 0.52

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 4.9e-06
                    EEEE--GC.....GCHHHH.........HHHHCCT.......CEEEEE--TTSTS-GGCS--HHHC....HHH.HHHHCCTT..TTSE.EEEEETC CS
  Abhydrolase_6   1 vlllHGagssassWlvapL.........aallaag.......vhvlapDlpGhGrsdpppldledl....adl.aalldelaagggpv.vlvGHSl 74 
                    v++lHG g + + +  +p+         +     g       + ++a+   +   s +  ++ ++      ++   +l++++  +++  v v+HS+
     KHJ30901.1 248 VVFLHGIGIGLYPY--TPFlkelnqlkkV-----GfsrtdeqIGIIAIENLNI--SFRLRDAPANSkdtcSEIeQIILNHFP--PNQQfVFVAHSF 332
                    68888866543333..1221222222442.....1222335544466666655..322222222221111333333777774..33337******* PP

                    HHHHHHHHHHCC..........EE.EEES-....----TTT CS
  Abhydrolase_6  75 GGalalaaapla........lvvg.vlldppp..talpagl 104
                    G+ +++++   +        +  + vl+dp p  + lp+  
     KHJ30901.1 333 GTNVVSLL---LknpatakyI-NSiVLIDPIPilLHLPTVA 369
                    *9877773...3333588844.445*****77553333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3955.64
//
Query:       KHJ30902.1  [L=523]
Description: putative autophagy-related protein 28 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        7.8    6.9  10.9        6.6    7.2   2.1    3.9  4  CLZ       C-terminal leucine zipper domain of cyclic nucleoti


Domain annotation for each model (and alignments):
>> CLZ  C-terminal leucine zipper domain of cyclic nucleotide-gated channels
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0         1   1.8e+04      43      56 ..     227     240 ..     225     241 .. 0.67
   2 ?    7.2   2.1   0.00037       6.6      16      66 ..     256     306 ..     252     308 .. 0.88
   3 ?    0.6   0.3     0.041   7.3e+02      50      70 ..     410     430 ..     364     431 .. 0.78
   4 ?    2.0   0.0     0.015   2.8e+02       3      18 ..     455     470 ..     454     481 .. 0.78

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 1
         CLZ  43 LqtrlarLlaeyes 56 
                  qt+l +L ++++s
  KHJ30902.1 227 WQTKLIKLNEQLSS 240
                 57888777777665 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.00037
         CLZ  16 DeeaakagaeqkeleekverLessLeaLqtrlarLlaeyessqrkLkqRit 66 
                 D ++    +e+k++ +k++ Le +L +L+ r + + +  ++s++k ++R++
  KHJ30902.1 256 DDDFTRLMEEEKTVLTKIRLLEDKLSQLKARRESIRRRIDESANKKEARLS 306
                 5566777899*************************9999999999888875 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.041
         CLZ  50 LlaeyessqrkLkqRitkLEk 70 
                  +a+++   +k+++ itkLE+
  KHJ30902.1 410 NIADFKDQIMKMNSIITKLEE 430
                 467888888999999999997 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.015
         CLZ   3 ekGreILlKdglLDee 18 
                 e+G++IL K   + e+
  KHJ30902.1 455 ERGKNILNKSVAMSEN 470
                 8*******97666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1123  (0.062636); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.39
# Mc/sec: 3984.77
//
Query:       KHJ30903.1  [L=136]
Description: putative histone H3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      4e-52  176.0   2.5    4.5e-52  175.9   2.5    1.0  1  Histone        Core histone H2A/H2B/H3/H4
      6e-06   26.6   0.0      9e-06   26.0   0.0    1.2  1  CENP-S         CENP-S protein
      4e-05   24.2   1.2    4.7e-05   24.0   1.2    1.2  1  PAF            PCNA-associated factor histone like domain
    4.3e-05   23.6   0.4    7.4e-05   22.8   0.1    1.6  2  CENP-T_C       Centromere kinetochore component CENP-T histon
     0.0038   17.5   0.4     0.0065   16.7   0.0    1.5  2  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
  ------ inclusion threshold ------
      0.026   14.6   0.2      0.042   13.9   0.0    1.5  2  TFIID-31kDa    Transcription initiation factor IID, 31kD subu


Domain annotation for each model (and alignments):
>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.9   2.5   1.5e-55   4.5e-52       1     131 []       1     132 [.       1     132 [. 0.99

  Alignments for each domain:
  == domain 1  score: 175.9 bits;  conditional E-value: 1.5e-55
                 XXEESXEEEXXXXEEXXXXXXXXXXHT.TS-SSSSB--TTT-XTTHHHHHHHHHHHHXXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHH CS
     Histone   1 marekekarkesektapekkvsakker.kasskskkkkkrryrpgtvalkeirkyqkstdlliqklpfaRvvreivksekedlrisaeavlalqealEa 98 
                 mar+k++ark+++++ap+k++++k +r +a+s+   kk++ry+pgtval+eir+yqkst+lli+klpf+R+vrei +++k+dlr++++a+ alqe +Ea
  KHJ30903.1   1 MARTKQTARKSTGGKAPRKQLASKAARkSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEA 99 
                 9************************************************************************************************** PP

                 HHHHHHHHHHHHHHHTTXSEEXHHHHHHHHHHT CS
     Histone  99 llvelfeeAnllakhaKRvTitpkDiqlArrlr 131
                 +lv+lfe++nl+a+haKRvTi++kDiqlArrlr
  KHJ30903.1 100 YLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLR 132
                 *******************************97 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0     3e-09     9e-06      13      71 ..      70     130 ..      65     133 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 3e-09
      CENP-S  13 kiveeeaa..ekeveatkqfiaaltelvykqlenlakDLeaFakHAkRstittdDvlLlaR 71 
                 ++v+e+a+  ++++++ +++i+al e v + l +l +D ++ a HAkR ti+ +D+ L  R
  KHJ30903.1  70 RLVREIAQdfKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARR 130
                 4555544423677789999*************************************99766 PP

>> PAF  PCNA-associated factor histone like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   1.2   1.6e-08   4.7e-05       1      62 [.       1      58 [.       1      82 [. 0.90

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 1.6e-08
         PAF  1 mVRTkAdvssarkavaakAprkslgassssssssssspkkkkkkyvGGNpvcpRptPaWQKp 62
                m RTk ++   rk  ++kAprk+l+++   +s+ s++  kk + y +G  v  R++   QK 
  KHJ30903.1  1 MARTKQTA---RKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPG-TVALREIRRYQKS 58
                99******...****************999999999988888888888.6888999999986 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.4   7.3e+03      14      25 ..      19      30 ..      14      39 .. 0.59
   2 !   22.8   0.1   2.5e-08   7.4e-05      11      76 ..      70     130 ..      58     135 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.4
    CENP-T_C 14 kklakrfakasg 25
                k+la+++a++s+
  KHJ30903.1 19 KQLASKAARKSA 30
                445555555544 PP

  == domain 2  score: 22.8 bits;  conditional E-value: 2.5e-08
    CENP-T_C  11 avvkklakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkr 76 
                  +v+ +a++f     s  + + +a+ al+++ + ++  + eD +  a Ha+R ti+++D+ l  +r
  KHJ30903.1  70 RLVREIAQDF----KSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQL-ARR 130
                 3455566666....5679*****************************************864.444 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       4.8   1.4e+04      39      46 ..      20      27 ..      19      29 .. 0.58
   2 !   16.7   0.0   2.2e-06    0.0065       2      64 ..      65     128 ..      64     128 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 4.8
                   HHHHHHHH CS
  CBFD_NFYB_HMF 39 elaseAae 46
                   +las+Aa+
     KHJ30903.1 20 QLASKAAR 27
                   46666664 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 2.2e-06
                    XXXHHHHHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF   2 eLPiarvkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklA 64 
                    +LP  r  + + +d +++ ++ ++A   ++e+ve ++ +l + ++  + ++kr ti+ ++i+lA
     KHJ30903.1  65 KLPFQRLVREIAQDfKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLA 128
                    78999988878888899********************************************998 PP

>> TFIID-31kDa  Transcription initiation factor IID, 31kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       2.5   7.6e+03      73      90 ..      10      27 ..       4      31 .. 0.63
   2 ?   13.9   0.0   1.4e-05     0.042      23      67 ..      85     129 ..      68     136 .] 0.85

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 2.5
  TFIID-31kDa 73 kqfkepppkelLlelAae 90
                 k+  ++ p++ L + Aa+
   KHJ30903.1 10 KSTGGKAPRKQLASKAAR 27
                 455556777777776654 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 1.4e-05
  TFIID-31kDa  23 yeerVvlqLldfayrytssvLedAkvlaehakkkevslddvrlAi 67 
                  +++  +  L + +  y +s++ed +++a hak+ +++ +d++lA 
   KHJ30903.1  85 FQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLAR 129
                  67777888999999*****************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.39u 0.20s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 1105.70
//
Query:       KHJ30904.1  [L=103]
Description: putative histone h4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      8e-09   35.6   0.1    9.7e-09   35.3   0.1    1.2  1  CENP-T_C         Centromere kinetochore component CENP-T hist
    2.4e-05   24.7   0.1    2.8e-05   24.5   0.1    1.2  1  Histone          Core histone H2A/H2B/H3/H4
    7.2e-05   22.9   0.1     0.0001   22.4   0.1    1.3  1  TAF              TATA box binding protein associated factor (
     0.0002   21.6   0.1    0.00035   20.8   0.0    1.5  1  CBFD_NFYB_HMF    Histone-like transcription factor (CBF/NF-Y)
     0.0004   20.7   0.1    0.00056   20.2   0.1    1.4  1  CENP-S           CENP-S protein
     0.0085   16.2   0.0       0.01   15.9   0.0    1.1  1  TFIID-31kDa      Transcription initiation factor IID, 31kD su
  ------ inclusion threshold ------
      0.031   14.3   0.0      0.037   14.0   0.0    1.3  1  Bromo_TP         Bromodomain associated
      0.052   13.3   0.2      0.064   13.0   0.2    1.0  1  UPF0137          Uncharacterised protein family (UPF0137)
       0.11   12.5   0.0       0.12   12.3   0.0    1.1  1  HIGH_NTase1_ass  Cytidyltransferase-related C-terminal region


Domain annotation for each model (and alignments):
>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.1   4.9e-12   9.7e-09      16      79 ..      33      96 ..      18      99 .. 0.86

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 4.9e-12
    CENP-T_C 16 lakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkrqrk 79
                 a r   ++g  +++++  ++    +++ f+e v +D  +y++Ha+RKt+ + Dv+  +krq++
  KHJ30904.1 33 PAIRRLARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQGR 96
                4444444456778999**********************************************86 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.1   1.4e-08   2.8e-05      77     129 ..      40      92 ..      16      94 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 1.4e-08
                 TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHHH CS
     Histone  77 sekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlArr 129
                 +++  +risa+  +    +l+ +l+ +  +A  +++haKR+T+t+ D+  A++
  KHJ30904.1  40 RRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALK 92 
                 4677889999999999999*****************************99987 PP

>> TAF  TATA box binding protein associated factor (TAF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.1   5.3e-08    0.0001       5      66 .]      31      92 ..      27      92 .. 0.80

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 5.3e-08
                -HHHHHHHHHHTT---B-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SSB-HHHHHHHH- CS
         TAF  5 pkesvkviAeslGitnLsdeaaalLaedveyrlkeivqeaakfmrhskRqkLtvaDvdsALr 66
                +k +++ +A   G++ +s+   ++    ++  l  ++++a+ +++h+kR++ t+ Dv +AL+
  KHJ30904.1 31 TKPAIRRLARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALK 92
                55666777777777777776666666667777889*************************98 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   1.7e-07   0.00035       8      65 .]      35      91 ..      28      91 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 1.7e-07
                   HHHHHHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF  8 vkkImksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65
                   ++++ +   ++++i+    e    ++++f+e + + A+ +++++krKt++  ++  A+
     KHJ30904.1 35 IRRLARRG-GVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYAL 91
                   77777777.88888888888888899***************************98876 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.1   2.8e-07   0.00056      42      73 ..      63      94 ..      24      97 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 2.8e-07
      CENP-S 42 lenlakDLeaFakHAkRstittdDvlLlaRrn 73
                le + +D  ++ +HAkR+t+t  Dv+  ++r+
  KHJ30904.1 63 LEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQ 94
                777889999****************9998885 PP

>> TFIID-31kDa  Transcription initiation factor IID, 31kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   5.1e-06      0.01      14      70 ..      38      94 ..      31     101 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 5.1e-06
  TFIID-31kDa 14 iLaslgvteyeerVvlqLldfayrytssvLedAkvlaehakkkevslddvrlAiqsr 70
                 + +  gv+ ++  +++    +   +   v++dA ++ ehak+k+v+  dv  A++ +
   KHJ30904.1 38 LARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQ 94
                 555667777777777777788889999***********************9998865 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.8e-05     0.037      33      70 ..      56      93 ..      27      97 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.8e-05
                HHHHHHHHHHHHHHHHHHHTTSS-SS--HHHHHHHHHH CS
    Bromo_TP 33 teiaqkYirelgeqaksfaehagRseptlkDvvltLqe 70
                +++++++++ + ++a  + eha R ++t  Dvv +L++
  KHJ30904.1 56 RGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKR 93
                678999999***************************97 PP

>> UPF0137  Uncharacterised protein family (UPF0137)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2   3.2e-05     0.064     141     212 ..      23      94 ..      18      99 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.2e-05
     UPF0137 141 lkseveslPrqavYtLasRegslekkeeiienynGetktelleiirktfPlldtdrRqknlsekllellakl 212
                 l+ +++ + + a+  La R g  +    i e+ +G  kt l  +ir  +  +++ +R++  s  ++  l++ 
  KHJ30904.1  23 LRDNIQGITKPAIRRLARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQ 94 
                 788999******************************************************999999999776 PP

>> HIGH_NTase1_ass  Cytidyltransferase-related C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   6.1e-05      0.12      69     109 ..      25      65 ..      11      92 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6.1e-05
  HIGH_NTase1_ass  69 erieGvsGtkireavvegnlekvkdmlPeetievlkeelen 109
                      + i+G++   ir+    g +++++ m+ eet  vlk +le 
       KHJ30904.1  25 DNIQGITKPAIRRLARRGGVKRISAMIYEETRGVLKTFLEG 65 
                      679*********************************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 850.47
//
Query:       KHJ30905.1  [L=396]
Description: putative pantetheine-phosphate adenylyltransferase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0045   17.2   0.0      0.019   15.1   0.0    2.2  1  CTP_transf_like  Cytidylyltransferase-like


Domain annotation for each model (and alignments):
>> CTP_transf_like  Cytidylyltransferase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.1e-06     0.019       2      55 ..     201     264 ..     200     388 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.1e-06
                      EEE--TT--HHHHHHHHHHHHHSSES........EEEEEESSTHCSST-..SCSSTHHHHHHHH CS
  CTP_transf_like   2 agGtFDpiHlGHlrlleqakklleed........livgvpsdeppkkkk..kplasaeeRleml 55 
                      +gGtFD +H GH  ll   + ll+          li+g++ de   +kk  + + s ++R + +
       KHJ30905.1 201 VGGTFDYLHVGHKLLLTATALLLQPPsctlsnsrLIIGITGDELLVNKKysEYIKSWKQRQADV 264
                      69**************999999887677788889999999998776665557777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 3206.59
//
Query:       KHJ30906.1  [L=660]
Description: putative ph signal transduction protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.4e-115  385.9   0.1   1.8e-115  385.5   0.1    1.1  1  PalH      PalH/RIM21


Domain annotation for each model (and alignments):
>> PalH  PalH/RIM21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  385.5   0.1  9.9e-120  1.8e-115       2     329 ..      24     376 ..      23     377 .. 0.95

  Alignments for each domain:
  == domain 1  score: 385.5 bits;  conditional E-value: 9.9e-120
        PalH   2 CsiyiLtsGfllllnskslvtlanaavftpkCsnssfskllqvledwkkntslstksdnkdsFyaSiipilfslsaicVitwmLvlllfllprkn.... 96 
                 Cs+ +L+ +++l+ln + ++tla +a+++p C++ss  ++l+       ++ +  +++++d+FyaS++p +++l+a++Vi++mL+++l+++pr++    
  KHJ30906.1  24 CSALTLPRNGVLTLNATTTITLAIDAIYQPLCNDSS--SVLIT------ESGTAGQIHFRDPFYASTLPECYALAATTVIAYMLFIMLLITPRRFlddg 114
                 ***************88889************8887..22222......222333678***************************************** PP

        PalH  97 ......................hkrplllklavllvaivltialakttkevfeeqyskgyqdaselekeivsstelkvlelisnlllnlaqvqivirlf 173
                                       +krp+l+k a+l+vai+ltia+a+t+k v+e qy+ gy+da++l+k++ ++t+lk++++is+++l+laq+q++irlf
  KHJ30906.1 115 mlvlgrggftngpsgnntefgiGKRPWLQKAAALTVAISLTIATADTFK-VAEMQYNLGYMDAQALQKKVENGTQLKIIRIISDTFLWLAQAQTLIRLF 212
                 ********************9888*************************.************************************************* PP

        PalH 174 srqkekriiilvGlaliildtilsalllfsk.......kfldalpalsylfelalvtlyaalviyYliskrkyilspkrmketilllilnllvillpvv 265
                 +rq+ek +i+++++ali+ld+++s+l+ f++       +f+da+pal ylf+lal++lyaa+v+yY+++k+ +++++++mk+++l+++++l+++l+pvv
  KHJ30906.1 213 PRQREKIVIKWTAFALITLDELFSILNAFAYkgssrprSFVDAVPALAYLFQLALSLLYAAWVSYYSMTKKAFAFYHPQMKNICLVALISLISVLIPVV 311
                 *****************************445677899************************************************************* PP

        PalH 266 ffildisnadvaewkeliiwvlkllitvivWewierieklerkeekegvLGRkisn.ddklevdp 329
                 ff++dis++d+a+w+++++wv++++++v+vWew+erie+ler+ +k+gvLGR++++ d++++v++
  KHJ30906.1 312 FFVTDISKPDLAGWGDYVRWVGAAAASVVVWEWVERIEALERNDKKDGVLGREVFDgDEMFDVSQ 376
                 *************************************************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (660 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1316  (0.0734006); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.31s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 4669.57
//
Query:       KHJ30907.1  [L=362]
Description: hypothetical protein EV44_g4908 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-15   57.4   0.3    1.4e-15   57.4   0.3    2.9  4  MBOAT_2   Membrane bound O-acyl transferase family


Domain annotation for each model (and alignments):
>> MBOAT_2  Membrane bound O-acyl transferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.11     2e+03      33      59 ..      74     102 ..      64     105 .. 0.69
   2 ?    0.4   0.1     0.046   8.3e+02      10      45 ..     101     136 ..      90     149 .. 0.65
   3 ?   -3.2   0.1      0.61   1.1e+04      11      27 ..     166     182 ..     163     195 .. 0.59
   4 !   57.4   0.3   7.5e-20   1.4e-15       2      82 ..     208     295 ..     207     296 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.11
     MBOAT_2  33 takkilrlllg..sklarylqllvaFllS 59 
                 +a +i + +    s+ ar l  l++F+ S
  KHJ30907.1  74 MAIWISPIVTPikSNSARSLFNLIVFVAS 102
                 45555555555435589999999999987 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.046
     MBOAT_2  10 eayslrrfWgrfWHqlfrrglkstakkilrlllgsk 45 
                  ++ + ++W+r+    + ++ ++++ ++l+lll ++
  KHJ30907.1 101 ASMKILDLWARRHKLPVYKSKEKPSDWLLSLLLMTE 136
                 455678999999444455566668999999988854 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 0.61
     MBOAT_2  11 ayslrrfWgrfWHqlfr 27 
                 a +l  + +  WH  + 
  KHJ30907.1 166 AATLTALHAISWHHPMV 182
                 44555555556665444 PP

  == domain 4  score: 57.4 bits;  conditional E-value: 7.5e-20
     MBOAT_2   2 pplfgslleayslrrfWgrfWHqlfrrglkstakkilrlllg.....sklarylqllvaFllSGllHaagdytqlapest..allfFl 82 
                 pp f +l++a sl++fW+++WH+ f++++ s+a+++lr++l       k+ar + +l aF+l +++H+++ y +l+++++  + lfF+
  KHJ30907.1 208 PPHFAPLYTADSLAGFWSEVWHNSFTSPCISLAYNPLRKVLLklglpDKIARSVGMLGAFSLMAIFHMFCVYPVLNSKAVnrIGLFFF 295
                 89*************************************9996766656***************************844444666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      238  (0.0132746); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2736.41
//
Query:       KHJ30908.1  [L=420]
Description: putative hexokinase-1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.6e-54  183.7   0.0    4.6e-54  183.4   0.0    1.1  1  Hexokinase_2  Hexokinase
    4.1e-40  137.8   0.0    5.7e-40  137.3   0.0    1.2  1  Hexokinase_1  Hexokinase


Domain annotation for each model (and alignments):
>> Hexokinase_2  Hexokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.4   0.0   5.1e-58   4.6e-54       2     240 .]     167     418 ..     166     418 .. 0.88

  Alignments for each domain:
  == domain 1  score: 183.4 bits;  conditional E-value: 5.1e-58
                   EEEEESSSEEEEEEEEGGG-G..GGTTTS......-TTSEEEEE--GGGTTTT-SS-..--HHHHHHHHHSSSTTS-HHHHCCSHHHHHHHHHHHHH CS
  Hexokinase_2   2 iGlIlGtGtNacyleklsnie..klegkk......eksgemviNtEwgafgdegklpllrtkyDkeldeespnpgeqlfEkmiSGmYLGelvrlvll 90 
                   ++lIlGtG+N+  + +++ ++  k+e  +       +++++++NtE+++ g+   + l+ t++D +l++++pnp+ q+fE ++SG+YLGe++rl+l+
    KHJ30908.1 167 LSLILGTGVNVGAHLPARLFPtsKFE--SrppewyASAKHILVNTEISMIGK---NMLPETEWDMKLKNDHPNPDYQPFEHFVSGRYLGEIIRLILI 258
                   689*************9998822444..366*******************97...44459************************************* PP

                   HHHC.TSSSC.....CCCSTTSS-THHHHHHHC--BTT-HHHHHHHHHCCS---..-HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH-....... CS
  Hexokinase_2  91 dlieekllfkgkse.klktpysldteflseieedesedleevrevleellgles.vteedleivrevceavsrRaarlvAagiaallkklgk..... 180
                   d ie++++f g  + +l+++ysl+te++s+ie+d+s++++++ ++l e +  ++ +t++d+ +++ + + v++Ra+ lvAa+i al++  ++     
    KHJ30908.1 259 DGIENEGFFGGVVPpSLRDKYSLETETISQIESDQSSNHQKAFQILCERHPSTApPTKRDILALHSISSRVTHRASGLVAAAIYALWQLRNEvndit 355
                   ****99***666556**************************999999974444436*******************************9755577788 PP

                   ....SSEEEEEESHHHHHSTTHHHHHHHHHHHHHT--S...-SEEEEE---TTTHHHHHHHHH CS
  Hexokinase_2 181 .eekekvtvgvdGslyekypkfrerlqealrellgeepe..kkvklklaedGsgvGAAliaav 240
                     + +k +v++ Gs++e+yp+f+  +qe l++l+  +       kl+ + ++s++GAA++ av
    KHJ30908.1 356 vGNYTKSSVACAGSVIEHYPGFKAACQEHLDSLVVANGGstGILKLVSTTESSLIGAAVASAV 418
                   85566778*************************5433334577899999**********9986 PP

>> Hexokinase_1  Hexokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.3   0.0   6.4e-44   5.7e-40      40     199 .]       1     160 [.       1     160 [. 0.93

  Alignments for each domain:
  == domain 1  score: 137.3 bits;  conditional E-value: 6.4e-44
                   -EE----S---S--EEEEEEEEESSSEEEEEEEEEESSS-EEEEEEE.....EE--GGGGGSBHHHHHHHHHHHHHHHHHHH....ST..T-S-EEE CS
  Hexokinase_1  40 mlptyvtrlPtGkekGtylAlDlGgtnlRvllveLlgeskveitqek.....ykipeelktgtaeeLFdfiakciaefleeegeekkeekeeeelpl 131
                   mlp++  +lPtG+e+G+++A+DlGg++lRv++++L g++ ++ ++e      +ki++++k+ +++++F+++a +i+e l e+++ +      + lp+
    KHJ30908.1   1 MLPSFNYHLPTGNESGKFIAVDLGGSTLRVAFIQLFGSDVFKPESEIlslkaFKISSDVKNLSGHSFFKWLAARIEETLLEQEIPN------TILPM 91 
                   9***********************************99955555555444488****************************98875......46*** PP

                   EEEE-SSEE-SBTT--EE-S--TT---TT-T.TSBHHHHHHHHHHHTT-SEEEEEEE-HHHHHHHHHHH CS
  Hexokinase_1 132 GftFSFPveqtsldegtlirwtKgfaikdve.gkdvvqllqealerkglpvkvvalvNDTvgtllslaY 199
                   G+++SFP+eqts ++g l++++Kgf+++dv  ++d+++l++++++++gl+v+  a++ND+ +tll+ +Y
    KHJ30908.1  92 GISWSFPLEQTSHRNGLLMKMGKGFSAADVLlKQDLADLIENSCRSRGLNVHLDAITNDSSATLLAKSY 160
                   *****************************99899********************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3075.63
//
Query:       KHJ30909.1  [L=665]
Description: putative cell division cycle protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-54  182.7   0.0    9.5e-54  181.2   0.0    1.8  1  ANAPC8      Anaphase promoting complex subunit 8 / Cdc23
      7e-26   88.2   9.0    6.6e-06   25.9   0.0    7.9  7  TPR_8       Tetratricopeptide repeat
    2.3e-22   77.8   4.8    0.00015   21.4   0.0    8.5  9  TPR_1       Tetratricopeptide repeat
      7e-22   75.7  11.9     0.0069   16.4   0.2    9.4  9  TPR_2       Tetratricopeptide repeat
    7.3e-16   57.5   6.5     0.0017   19.0   0.0    8.1  8  TPR_14      Tetratricopeptide repeat
    4.7e-13   49.6   3.3    5.8e-05   23.7   0.3    6.1  8  TPR_16      Tetratricopeptide repeat
    1.9e-12   46.6   0.1    2.4e-07   30.3   0.2    5.3  6  TPR_11      TPR repeat
    5.7e-10   39.3  11.9        1.2    9.5   0.1    7.8  8  TPR_12      Tetratricopeptide repeat
    1.9e-09   37.9   4.1       0.58   10.7   0.1    5.6  5  TPR_19      Tetratricopeptide repeat
    8.5e-07   29.0   1.9      0.056   13.6   0.0    4.3  5  TPR_9       Tetratricopeptide repeat
      1e-06   28.3  10.7        1.4    9.1   0.2    7.2  7  TPR_7       Tetratricopeptide repeat
      1e-06   28.8   3.3        1.6    9.0   0.0    5.6  5  ANAPC3      Anaphase-promoting complex, cyclosome, subunit 3
    5.2e-05   23.3   4.0        1.2    9.7   0.0    6.3  6  TPR_17      Tetratricopeptide repeat
    0.00018   21.6   3.6     0.0024   18.0   0.2    3.2  3  DUF3856     Domain of Unknown Function (DUF3856)
    0.00021   21.1   6.6        2.1    8.3   0.6    6.7  7  TPR_10      Tetratricopeptide repeat
     0.0023   17.7   0.1     0.0094   15.7   0.1    1.9  2  DUF1955     Domain of unknown function (DUF1955)
  ------ inclusion threshold ------
      0.013   16.2   3.1          3    8.7   0.1    4.5  4  Sel1        Sel1 repeat
      0.044   13.0   7.9        4.7    6.3   0.5    4.3  5  TPR_15      Tetratricopeptide repeat
      0.094   12.8   0.6        8.4    6.6   0.1    3.4  3  Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
       0.41   11.4  19.6       0.38   11.5   0.2    6.7  6  TPR_6       Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> ANAPC8  Anaphase promoting complex subunit 8 / Cdc23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.2   0.0   1.1e-56   9.5e-54       2     140 .]       9     188 ..       8     188 .. 0.95

  Alignments for each domain:
  == domain 1  score: 181.2 bits;  conditional E-value: 1.1e-56
                 HHHHHHHHHHHHHHTT-HHHHHHHHHHHHTSS-----------------------........HHHHHHHHHTHHHHHHHHHHHHTT-HHHHHHH.... CS
      ANAPC8   2 lraeLreavvklsercLyqsakWaaElLngleessaeedessteseseasespsr.aftankdpeeaaleakeldkYllAkslFDckEfdrcaav.... 95 
                 lr+ L+eav+k+sercLyqsakWaaE L+++++s+++++ ++ + ++  +++  + a+++n++peea leake++ YllAkslFDc+Efdrca+v    
  KHJ30909.1   9 LRKILQEAVIKCSERCLYQSAKWAAEFLTSMPNSDKDTQPEDPQLTEVRDDNFLPvAISRNSNPEEAYLEAKEINSYLLAKSLFDCREFDRCAEVflpd 107
                 8999*********************************9999988777666655554999**************************************** PP

                 ....................................TTT--SHHHHHHHHHHHHHHHHHHC---------------SSSTT CS
      ANAPC8  96 ....................................lkdelsqkslFLalYakylagekrkeEesemvlgpqdkgnvvnke 140
                                                     + ++lsqkslFL+lYak+++gek keEesemv+gp+d+g++vnk+
  KHJ30909.1 108 tvlqgiistptgkgtcnsenpldkgkgpqlnlknerKFPQLSQKSLFLSLYAKFISGEKIKEEESEMVMGPHDGGQTVNKQ 188
                 **********************************99999****************************************97 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.016        15       5      32 ..     219     246 ..     219     248 .. 0.86
   2 !   14.0   0.0     5e-05     0.045       2      33 ..     380     411 ..     379     412 .. 0.93
   3 !   25.9   0.0   7.3e-09   6.6e-06       2      34 .]     414     446 ..     413     446 .. 0.95
   4 ?    5.9   0.3      0.02        18       1      32 [.     447     478 ..     447     478 .. 0.90
   5 !   12.3   0.0   0.00017      0.16       2      28 ..     482     508 ..     481     511 .. 0.95
   6 !   18.2   0.2   2.3e-06     0.002       2      28 ..     529     555 ..     528     559 .. 0.92
   7 ?    3.4   0.1      0.12   1.1e+02       2      21 ..     603     622 ..     602     624 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.016
                 HHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyyekaleldp 32 
                 ++ g+++ k++d eeA+ ++ k + + p
  KHJ30909.1 219 FLYGLVLAKKKDEEEAMRWLIKSVHICP 246
                 57899*************9999886665 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 5e-05
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 e ++ +g+ y+    +e++++y+++al+ld++
  KHJ30909.1 380 ETCVVIGNYYSLISSHEKSVQYFRRALTLDRS 411
                 67999************************985 PP

  == domain 3  score: 25.9 bits;  conditional E-value: 7.3e-09
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 +a+ ++g+ y +l++ ++A+e+y++a+++++++
  KHJ30909.1 414 SAWTLMGHEYVELKNTHAAIESYRRAVDINRKD 446
                 69****************************985 PP

  == domain 4  score: 5.9 bits;  conditional E-value: 0.02
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekaleldp 32 
                 ++a+y lg++y+ l+ +  A  yy++a  l+p
  KHJ30909.1 447 YRAWYGLGQTYEVLEMHAYALWYYKRASGLRP 478
                 59**********99999999999999988877 PP

  == domain 5  score: 12.3 bits;  conditional E-value: 0.00017
                 CHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekal 28 
                 ++++  g++++++g+ +e+++++++al
  KHJ30909.1 482 KMWQAVGQCLKQMGRDQESIKALKRAL 508
                 6899*********************97 PP

  == domain 6  score: 18.2 bits;  conditional E-value: 2.3e-06
                 CHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekal 28 
                 e+++ ++++y+ lg+  eAk+y+e +l
  KHJ30909.1 529 EILLEIANAYERLGNEAEAKSYMETCL 555
                 68899*********************8 PP

  == domain 7  score: 3.4 bits;  conditional E-value: 0.12
                 CHHHHHHHHHHHTT-HHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAk 21 
                 +a ++l++  + +gdye A 
  KHJ30909.1 603 KARMWLAKYAMRTGDYERAL 622
                 677899***********996 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       8.6   7.7e+03      22      31 ..      74      83 ..      73      84 .. 0.85
   2 ?    0.4   0.0      0.76   6.8e+02       8      32 ..     222     246 ..     222     248 .. 0.89
   3 ?    3.4   0.0     0.085        76       3      32 ..     313     342 ..     311     343 .. 0.88
   4 !   13.1   0.0   7.3e-05     0.065       6      34 .]     384     412 ..     379     412 .. 0.89
   5 !   21.4   0.0   1.7e-07   0.00015       3      34 .]     415     446 ..     414     446 .. 0.95
   6 !   13.6   0.4   4.9e-05     0.044       2      32 ..     448     478 ..     447     480 .. 0.90
   7 !    9.8   0.0   0.00078       0.7       7      28 ..     487     508 ..     482     514 .. 0.88
   8 ?    5.6   0.1     0.016        15       2      23 ..     529     550 ..     528     559 .. 0.83
   9 ?    2.0   0.1      0.23     2e+02       6      22 ..     607     623 ..     602     624 .. 0.67

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 8.6
                HHHHHHHHHS CS
       TPR_1 22 eyyekALeln 31
                e+y +A e+n
  KHJ30909.1 74 EAYLEAKEIN 83
                8999999998 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.76
                 HHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   8 GnayfklgkydeAleyyekALelnP 32 
                 G+++ k+++ +eA     k + ++P
  KHJ30909.1 222 GLVLAKKKDEEEAMRWLIKSVHICP 246
                 8999**********99999888887 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.085
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnP 32 
                 +l  lG + ++ +++  A++++   L+l P
  KHJ30909.1 313 ILTSLGIMAYHTKDFVTAEAHFANLLTLHP 342
                 5789******************88888877 PP

  == domain 4  score: 13.1 bits;  conditional E-value: 7.3e-05
                 HHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   6 nlGnayfklgkydeAleyyekALelnPnn 34 
                  +Gn y     +++ ++y+++AL+l+ ++
  KHJ30909.1 384 VIGNYYSLISSHEKSVQYFRRALTLDRSF 412
                 5899**********************875 PP

  == domain 5  score: 21.4 bits;  conditional E-value: 1.7e-07
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPnn 34 
                 a+  +G+ y +l++   A+e y++A+ +n ++
  KHJ30909.1 415 AWTLMGHEYVELKNTHAAIESYRRAVDINRKD 446
                 9****************************875 PP

  == domain 6  score: 13.6 bits;  conditional E-value: 4.9e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnP 32 
                 +a+y+lG++y  l+++  Al yy++A  l+P
  KHJ30909.1 448 RAWYGLGQTYEVLEMHAYALWYYKRASGLRP 478
                 8************************966665 PP

  == domain 7  score: 9.8 bits;  conditional E-value: 0.00078
                 HHHHHHHTT-HHHHHHHHHHHH CS
       TPR_1   7 lGnayfklgkydeAleyyekAL 28 
                  G+++ ++g+ +e +++ ++AL
  KHJ30909.1 487 VGQCLKQMGRDQESIKALKRAL 508
                 59*******************9 PP

  == domain 8  score: 5.6 bits;  conditional E-value: 0.016
                 HHHHHHHHHHHHTT-HHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAley 23 
                 ++l  ++nay +lg+  eA  y
  KHJ30909.1 529 EILLEIANAYERLGNEAEAKSY 550
                 678899*********9999876 PP

  == domain 9  score: 2.0 bits;  conditional E-value: 0.23
                 HHHHHHHHTT-HHHHHH CS
       TPR_1   6 nlGnayfklgkydeAle 22 
                  l+   ++ g+y+ Al+
  KHJ30909.1 607 WLAKYAMRTGDYERALQ 623
                 56666777788888876 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1       1.1   9.8e+02       5      24 ..      85     104 ..      74     105 .. 0.90
   2 ?    4.0   0.0     0.073        66       5      32 ..     219     246 ..     218     248 .. 0.88
   3 !    6.9   0.0    0.0083       7.4       3      32 ..     313     342 ..     311     344 .. 0.90
   4 ?    6.0   0.0     0.016        15       7      32 ..     385     410 ..     379     412 .. 0.78
   5 !   13.4   0.0   7.3e-05     0.066       3      33 ..     415     445 ..     414     446 .. 0.93
   6 ?    5.1   1.1     0.033        30       2      27 ..     448     473 ..     447     478 .. 0.90
   7 !   11.6   0.0   0.00028      0.25       4      29 ..     484     509 ..     482     514 .. 0.90
   8 !   16.4   0.2   7.7e-06    0.0069       1      31 [.     528     558 ..     528     561 .. 0.91
   9 !    9.0   0.1    0.0019       1.7       3      23 ..     604     624 ..     602     630 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 1.1
       TPR_2   5 ynlGlayyklgdyeeAleaf 24 
                 y l+++++   ++++++e f
  KHJ30909.1  85 YLLAKSLFDCREFDRCAEVF 104
                 88999999999999999987 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.073
       TPR_2   5 ynlGlayyklgdyeeAleafekAleldP 32 
                 +  Gl+++k++d eeA +++ k++ ++P
  KHJ30909.1 219 FLYGLVLAKKKDEEEAMRWLIKSVHICP 246
                 5689**************9988888877 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0083
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldP 32 
                 +l  lG  +y+ +d+  A+++f   l l P
  KHJ30909.1 313 ILTSLGIMAYHTKDFVTAEAHFANLLTLHP 342
                 56779*********************9988 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.016
       TPR_2   7 lGlayyklgdyeeAleafekAleldP 32 
                 +G+ y     +e+ +++f++Al ld 
  KHJ30909.1 385 IGNYYSLISSHEKSVQYFRRALTLDR 410
                 677777777789***********996 PP

  == domain 5  score: 13.4 bits;  conditional E-value: 7.3e-05
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPn 33 
                 a+  +G  y +l++   A+e +++A+ ++ +
  KHJ30909.1 415 AWTLMGHEYVELKNTHAAIESYRRAVDINRK 445
                 7999************************987 PP

  == domain 6  score: 5.1 bits;  conditional E-value: 0.033
       TPR_2   2 ealynlGlayyklgdyeeAleafekA 27 
                 +a+y lG+ y+ l  ++ Al ++++A
  KHJ30909.1 448 RAWYGLGQTYEVLEMHAYALWYYKRA 473
                 69**************9999999988 PP

  == domain 7  score: 11.6 bits;  conditional E-value: 0.00028
       TPR_2   4 lynlGlayyklgdyeeAleafekAle 29 
                 + + G+++ ++g+ +e ++a+++Al 
  KHJ30909.1 484 WQAVGQCLKQMGRDQESIKALKRALI 509
                 7789********************96 PP

  == domain 8  score: 16.4 bits;  conditional E-value: 7.7e-06
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleld 31 
                 +e+l ++++ay++lg+ +eA+ ++e +l+ +
  KHJ30909.1 528 PEILLEIANAYERLGNEAEAKSYMETCLAQE 558
                 588999*********************9875 PP

  == domain 9  score: 9.0 bits;  conditional E-value: 0.0019
       TPR_2   3 alynlGlayyklgdyeeAlea 23 
                 a ++l++ +++ gdye+Al++
  KHJ30909.1 604 ARMWLAKYAMRTGDYERALQL 624
                 6689**************986 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       4.4     4e+03       5      24 ..      85     104 ..      84     105 .. 0.89
   2 ?    3.2   0.0      0.22     2e+02       6      40 ..     220     254 ..     216     258 .. 0.88
   3 ?    0.3   0.0       1.9   1.7e+03       8      37 ..     318     347 ..     313     353 .. 0.81
   4 ?    7.0   0.0     0.014        13      17      42 ..     395     420 ..     385     421 .. 0.90
   5 !   19.0   0.0   1.9e-06    0.0017       3      43 ..     415     455 ..     413     456 .. 0.95
   6 ?    6.2   0.0     0.025        22       3      28 ..     483     508 ..     466     512 .. 0.95
   7 !   12.6   0.0   0.00022       0.2       1      38 [.     528     565 ..     528     569 .. 0.92
   8 ?    7.0   0.2     0.013        12       2      30 ..     603     631 ..     602     641 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 4.4
      TPR_14   5 lalaeallalGdpdeAiall 24 
                 ++la+ l+  +++d+ ++++
  KHJ30909.1  85 YLLAKSLFDCREFDRCAEVF 104
                 6899***********99886 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.22
      TPR_14   6 alaeallalGdpdeAiallrralalaPddaeawll 40 
                 +++ +l+   d +eA++ l + +  +P +++ wl+
  KHJ30909.1 220 LYGLVLAKKKDEEEAMRWLIKSVHICPINWACWLE 254
                 78999999*******************99999987 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 1.9
      TPR_14   8 aeallalGdpdeAiallrralalaPddaea 37 
                 +   ++  d+ +A+a++  +l l+P  +++
  KHJ30909.1 318 GIMAYHTKDFVTAEAHFANLLTLHPYRLDY 347
                 666678889999************987665 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.014
      TPR_14  17 pdeAiallrralalaPddaeawllla 42 
                 ++++++++rral l+ +++ aw+l++
  KHJ30909.1 395 HEKSVQYFRRALTLDRSFLSAWTLMG 420
                 7899******************9986 PP

  == domain 5  score: 19.0 bits;  conditional E-value: 1.9e-06
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 a+ ++++ + +l ++ +Ai+ +rra++ + +d +aw+ l+q
  KHJ30909.1 415 AWTLMGHEYVELKNTHAAIESYRRAVDINRKDYRAWYGLGQ 455
                 89999**********************************98 PP

  == domain 6  score: 6.2 bits;  conditional E-value: 0.025
      TPR_14   3 allalaeallalGdpdeAiallrral 28 
                 +++a ++ l + G+ +e+i++l+ral
  KHJ30909.1 483 MWQAVGQCLKQMGRDQESIKALKRAL 508
                 699999******************97 PP

  == domain 7  score: 12.6 bits;  conditional E-value: 0.00022
      TPR_14   1 peallalaeallalGdpdeAiallrralalaPddaeaw 38 
                 pe ll++a a+++lG+ +eA  + + +la+  ++ e++
  KHJ30909.1 528 PEILLEIANAYERLGNEAEAKSYMETCLAQEEGSSEIH 565
                 6899**************************99998876 PP

  == domain 8  score: 7.0 bits;  conditional E-value: 0.013
      TPR_14   2 eallalaeallalGdpdeAiallrralal 30 
                 +a++ la++ ++ Gd+++A++l  +++++
  KHJ30909.1 603 KARMWLAKYAMRTGDYERALQLGTELCQD 631
                 58999***************986666555 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0         4   3.6e+03      38      56 ..     219     237 ..     219     239 .. 0.88
   2 ?    4.2   0.0     0.077        69      20      65 ..     300     342 ..     298     344 .. 0.82
   3 ?   -1.9   0.0       6.2   5.6e+03      48      63 ..     393     408 ..     386     411 .. 0.73
   4 !   23.7   0.3   6.5e-08   5.8e-05       3      51 ..     419     464 ..     417     478 .. 0.86
   5 ?    1.7   0.0      0.48   4.3e+02      36      63 ..     483     510 ..     466     517 .. 0.77
   6 ?    3.8   0.1       0.1        90      14      53 ..     498     547 ..     486     553 .. 0.75
   7 ?    1.5   0.1      0.55   4.9e+02       2      31 ..     533     562 ..     532     566 .. 0.82
   8 !   10.9   0.0   0.00063      0.57      32      60 ..     600     628 ..     595     632 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 4
      TPR_16  38 lllgdaalrqgrlaeAaal 56 
                 +l+g++++++++ +eA  +
  KHJ30909.1 219 FLYGLVLAKKKDEEEAMRW 237
                 689***********99866 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.077
      TPR_16  20 leaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraap 65 
                 l ++ + +p sP+    l  lg +a++ +++  A+a ++ +l+  p
  KHJ30909.1 300 LSQLAEVFPQSPF---ILTSLGIMAYHTKDFVTAEAHFANLLTLHP 342
                 6788899966666...999****************99987776666 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 6.2
      TPR_16  48 grlaeAaalyraalra 63 
                 + +++ ++++r+al+ 
  KHJ30909.1 393 SSHEKSVQYFRRALTL 408
                 5678888999998864 PP

  == domain 4  score: 23.7 bits;  conditional E-value: 6.5e-08
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrla 51 
                 ++++++++++  +A++ +++a++ +     +++A+++lg+ + ++  +a
  KHJ30909.1 419 MGHEYVELKNTHAAIESYRRAVDIN---RKDYRAWYGLGQTYEVLEMHA 464
                 79***********************...88899********99876555 PP

  == domain 5  score: 1.7 bits;  conditional E-value: 0.48
      TPR_16  36 AllllgdaalrqgrlaeAaalyraalra 63 
                 ++ + g+++ + gr +e + ++++al  
  KHJ30909.1 483 MWQAVGQCLKQMGRDQESIKALKRALIS 510
                 5556899999999999999999999854 PP

  == domain 6  score: 3.8 bits;  conditional E-value: 0.1
      TPR_16  14 ddAaaaleaalkrdpssPd...........aaeAllllgdaalrqgrlaeA 53 
                 ++ ++al++al +d s+ d           ++e ll+ ++a+ r+g+ aeA
  KHJ30909.1 498 QESIKALKRALISD-SHYDkvnnkdrsgilDPEILLEIANAYERLGNEAEA 547
                 56677777777777.555577777777777888999999999999988887 PP

  == domain 7  score: 1.5 bits;  conditional E-value: 0.55
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssP 31 
                 + a+a+ r+g+ ++A  + e+ l++  +s+
  KHJ30909.1 533 EIANAYERLGNEAEAKSYMETCLAQEEGSS 562
                 6799999****9999999999888886665 PP

  == domain 8  score: 10.9 bits;  conditional E-value: 0.00063
      TPR_16  32 daaeAllllgdaalrqgrlaeAaalyraa 60 
                 ++  A+++l+  a r g++++A++l  ++
  KHJ30909.1 600 ATSKARMWLAKYAMRTGDYERALQLGTEL 628
                 5678*******************998876 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       4.2   3.8e+03       1      25 [.     222     246 ..     222     248 .. 0.82
   2 ?    3.3   0.0     0.073        66      10      35 ..     395     420 ..     386     421 .. 0.87
   3 !   30.3   0.2   2.7e-10   2.4e-07       1      39 [.     420     458 ..     420     460 .. 0.97
   4 ?    3.9   0.0     0.048        43       4      21 ..     491     508 ..     488     519 .. 0.87
   5 ?    3.0   0.0     0.093        84      27      42 .]     527     542 ..     527     542 .. 0.95
   6 ?   -1.9   0.0       3.2   2.9e+03       8      22 ..     616     623 ..     614     624 .. 0.58

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 4.2
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldP 25 
                 G ++ ++ + eeA+ ++ k + ++P
  KHJ30909.1 222 GLVLAKKKDEEEAMRWLIKSVHICP 246
                 66778888889***99999988887 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.073
      TPR_11  10 yeeAieaYkkAlkldPdnaeayynLG 35 
                  e++++ +++Al ld ++ +a+  +G
  KHJ30909.1 395 HEKSVQYFRRALTLDRSFLSAWTLMG 420
                 6999999**********999998888 PP

  == domain 3  score: 30.3 bits;  conditional E-value: 2.7e-10
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 G++y+e+ +  +Aie+Y++A++++ ++ +a+y+LG++y 
  KHJ30909.1 420 GHEYVELKNTHAAIESYRRAVDINRKDYRAWYGLGQTYE 458
                 99***********************************95 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.048
      TPR_11   4 yyeqGkyeeAieaYkkAl 21 
                 + + G+  e+i+a+k+Al
  KHJ30909.1 491 LKQMGRDQESIKALKRAL 508
                 6799*************8 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.093
      TPR_11  27 naeayynLGlayykqG 42 
                 ++e+++++++ay ++G
  KHJ30909.1 527 DPEILLEIANAYERLG 542
                 79************98 PP

  == domain 6  score: -1.9 bits;  conditional E-value: 3.2
      TPR_11   8 GkyeeAieaYkkAlk 22 
                 G+ye A+       +
  KHJ30909.1 616 GDYERAL-------Q 623
                 5566555.......4 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.91   8.2e+02      48      71 ..     218     241 ..     200     246 .. 0.61
   2 ?   -1.5   0.0       3.5   3.2e+03      28      54 ..     285     306 ..     283     310 .. 0.71
   3 ?    3.6   0.0     0.092        82       6      33 ..     314     341 ..     309     357 .. 0.79
   4 ?    6.4   0.0     0.012        11      51      76 ..     385     410 ..     382     411 .. 0.90
   5 !    7.4   0.7    0.0061       5.5       6      35 ..     416     445 ..     412     478 .. 0.57
   6 !    8.3   0.5    0.0031       2.7      41      72 ..     477     508 ..     446     508 .. 0.70
   7 !    9.5   0.1    0.0013       1.2       5      32 ..     530     557 ..     527     566 .. 0.83
   8 ?    2.2   0.1      0.25   2.2e+02       6      25 ..     607     624 ..     601     629 .. 0.67

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.91
      TPR_12  48 lrnLgrlyralgryeeAlelleea 71 
                  + +g ++ + ++ eeA ++l ++
  KHJ30909.1 218 EFLYGLVLAKKKDEEEAMRWLIKS 241
                 455555555555666665555444 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 3.5
      TPR_12  28 kaleiarrllGpdhpltattlrnLgrl 54 
                 ++le++++     +p ++++l  L+++
  KHJ30909.1 285 TSLELYQE-----SPSLSNSLSQLAEV 306
                 57777754.....45588888888877 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.092
      TPR_12   6 lnnlaavlrrlgrydeAlellekaleia 33 
                 l+ l+ + ++ +++  A++++   l ++
  KHJ30909.1 314 LTSLGIMAYHTKDFVTAEAHFANLLTLH 341
                 5578999999999999999999888776 PP

  == domain 4  score: 6.4 bits;  conditional E-value: 0.012
      TPR_12  51 LgrlyralgryeeAlelleealaiae 76 
                 +g +y++   +e+ ++++++al +++
  KHJ30909.1 385 IGNYYSLISSHEKSVQYFRRALTLDR 410
                 789999999*************9987 PP

  == domain 5  score: 7.4 bits;  conditional E-value: 0.0061
      TPR_12   6 lnnlaavlrrlgrydeAlellekaleiarr 35 
                 ++ +++ + +l++ + A+e +++a++i r+
  KHJ30909.1 416 WTLMGHEYVELKNTHAAIESYRRAVDINRK 445
                 444555566667777777777777777753 PP

  == domain 6  score: 8.3 bits;  conditional E-value: 0.0031
      TPR_12  41 hpltattlrnLgrlyralgryeeAlelleeal 72 
                 +p+     ++ g+++ ++gr +e +++l++al
  KHJ30909.1 477 RPWDGKMWQAVGQCLKQMGRDQESIKALKRAL 508
                 66666677788888888888888888888886 PP

  == domain 7  score: 9.5 bits;  conditional E-value: 0.0013
      TPR_12   5 alnnlaavlrrlgrydeAlellekalei 32 
                 +l ++a+++ rlg+ +eA ++ e++l++
  KHJ30909.1 530 ILLEIANAYERLGNEAEAKSYMETCLAQ 557
                 5558999999999999999999999986 PP

  == domain 8  score: 2.2 bits;  conditional E-value: 0.25
      TPR_12   6 lnnlaavlrrlgrydeAlel 25 
                 +  la   +r g+y+ Al+l
  KHJ30909.1 607 W--LAKYAMRTGDYERALQL 624
                 4..77777777777777765 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       5.3   4.7e+03       5      22 ..     325     342 ..     321     354 .. 0.86
   2 !    9.1   0.0     0.002       1.8       6      35 ..     428     457 ..     423     462 .. 0.90
   3 !   10.0   0.0    0.0011      0.96      10      55 ..     466     511 ..     461     517 .. 0.91
   4 !   10.7   0.1   0.00065      0.58      24      62 ..     527     565 ..     512     570 .. 0.86
   5 ?    4.0   0.1      0.08        72      25      47 ..     602     624 ..     598     626 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 5.3
      TPR_19   5 gdyaeAlalleqalqedp 22 
                 +d+  A a+++++l+  p
  KHJ30909.1 325 KDFVTAEAHFANLLTLHP 342
                 68999******9999888 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.002
      TPR_19   6 dyaeAlalleqalqedpknaearllLAeal 35 
                 +  +A++ +++a + + k+ +a+++L + +
  KHJ30909.1 428 NTHAAIESYRRAVDINRKDYRAWYGLGQTY 457
                 6779***********************998 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.0011
      TPR_19  10 AlalleqalqedpknaearllLAeallalgqldeAealLdalpeed 55 
                 Al ++++a    p ++  + +  ++l ++g+ +e +++L++++ +d
  KHJ30909.1 466 ALWYYKRASGLRPWDGKMWQAVGQCLKQMGRDQESIKALKRALISD 511
                 67789***********************************998665 PP

  == domain 4  score: 10.7 bits;  conditional E-value: 0.00065
      TPR_19  24 naearllLAeallalgqldeAealLdalpeedpddarya 62 
                 ++e++l  A+a+  lg+ +eA+  +++ ++++  +++++
  KHJ30909.1 527 DPEILLEIANAYERLGNEAEAKSYMETCLAQEEGSSEIH 565
                 89**********************999999988887776 PP

  == domain 5  score: 4.0 bits;  conditional E-value: 0.08
      TPR_19  25 aearllLAeallalgqldeAeal 47 
                 + ar++LA+  + +g+++ A +l
  KHJ30909.1 602 SKARMWLAKYAMRTGDYERALQL 624
                 5799****************985 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0         7   6.3e+03      21      60 ..     303     342 ..     294     346 .. 0.69
   2 ?    2.9   0.0      0.14   1.3e+02      14      61 ..     398     445 ..     393     449 .. 0.80
   3 !   13.6   0.0   6.3e-05     0.056       3      59 ..     455     511 ..     453     522 .. 0.90
   4 !    8.4   0.0    0.0026       2.3      28      67 ..     527     566 ..     526     570 .. 0.86
   5 ?   -2.4   0.0       6.1   5.5e+03       5      16 ..     612     623 ..     608     640 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 7
       TPR_9  21 llllaPddpeerrdRGlllaqlGclsaAladLeaylalap 60 
                 l  ++P++p  +   G++ ++  ++ +A a +   l l p
  KHJ30909.1 303 LAEVFPQSPFILTSLGIMAYHTKDFVTAEAHFANLLTLHP 342
                 5566777777777778888888777777766666555554 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.14
       TPR_9  14 alavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapd 61 
                   ++  r l l+    + +   G  +++l +++aA++   ++++++ +
  KHJ30909.1 398 SVQYFRRALTLDRSFLSAWTLMGHEYVELKNTHAAIESYRRAVDINRK 445
                 5566677777777778888888889*****************998765 PP

  == domain 3  score: 13.6 bits;  conditional E-value: 6.3e-05
       TPR_9   3 aiaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylala 59 
                 +++   e ++ al+++ r   l P d   +   G++l q+G+ ++ +++L ++l  +
  KHJ30909.1 455 QTYEVLEMHAYALWYYKRASGLRPWDGKMWQAVGQCLKQMGRDQESIKALKRALISD 511
                 66777788999*****************************************99655 PP

  == domain 4  score: 8.4 bits;  conditional E-value: 0.0026
       TPR_9  28 dpeerrdRGlllaqlGclsaAladLeaylalapdapdaea 67 
                 dpe +++ + ++++lG+ ++A   +e++la+++   +++ 
  KHJ30909.1 527 DPEILLEIANAYERLGNEAEAKSYMETCLAQEEGSSEIHE 566
                 68889999***********************997766655 PP

  == domain 5  score: -2.4 bits;  conditional E-value: 6.1
       TPR_9   5 aireedwerala 16 
                 a+r  d+eral+
  KHJ30909.1 612 AMRTGDYERALQ 623
                 567777777774 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       5.6     5e+03       2      15 ..     364     377 ..     364     378 .. 0.82
   2 ?    6.2   0.0     0.013        12       2      31 ..     382     411 ..     381     415 .. 0.78
   3 ?    3.4   0.0       0.1        91       4      28 ..     418     440 ..     415     448 .. 0.76
   4 ?    4.0   0.0     0.068        61       1      33 [.     449     481 ..     449     483 .. 0.84
   5 ?    3.0   0.0      0.14   1.3e+02       6      28 ..     488     508 ..     484     516 .. 0.84
   6 !    9.1   0.2    0.0016       1.4       2      28 ..     531     557 ..     530     564 .. 0.85
   7 ?    2.7   0.0      0.17   1.6e+02       6      21 ..     609     624 ..     608     626 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 5.6
       TPR_7   2 LlnLarlysrlGdy 15 
                 L+ La+++s++ ++
  KHJ30909.1 364 LSFLAHICSNVDKF 377
                 678******98766 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.013
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkd 31 
                 ++ +++ ys    +e+ +++++++L l+++
  KHJ30909.1 382 CVVIGNYYSLISSHEKSVQYFRRALTLDRS 411
                 55678888888889*********7777665 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.1
       TPR_7   4 nLarlysrlGdyeeAielyeqsLal 28 
                  +++ y++l ++  Aie y++  a+
  KHJ30909.1 418 LMGHEYVELKNTHAAIESYRR--AV 440
                 56666999999**********..54 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.068
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdpe 33 
                 a++ L+++y+ l  ++ A+++y+++ +l+  ++
  KHJ30909.1 449 AWYGLGQTYEVLEMHAYALWYYKRASGLRPWDG 481
                 67889999999999999*******888887766 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.14
       TPR_7   6 arlysrlGdyeeAielyeqsLal 28 
                 +++  ++G+ +e i+ +++  al
  KHJ30909.1 488 GQCLKQMGRDQESIKALKR--AL 508
                 889999*************..54 PP

  == domain 6  score: 9.1 bits;  conditional E-value: 0.0016
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLal 28 
                 Ll +a++y+rlG+ +eA ++ e +La 
  KHJ30909.1 531 LLEIANAYERLGNEAEAKSYMETCLAQ 557
                 7899*******************6654 PP

  == domain 7  score: 2.7 bits;  conditional E-value: 0.17
       TPR_7   6 arlysrlGdyeeAiel 21 
                 a    r Gdye+A++l
  KHJ30909.1 609 AKYAMRTGDYERALQL 624
                 6666899******975 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.028        25      25      46 ..      83     104 ..      68     111 .. 0.83
   2 ?    2.2   0.0      0.24   2.2e+02      27      49 ..     219     241 ..     201     253 .. 0.88
   3 ?    6.1   0.4     0.015        13       9      70 ..     399     461 ..     391     473 .. 0.83
   4 ?    5.3   0.3     0.025        22       3      81 ..     427     506 ..     425     507 .. 0.86
   5 !    9.0   0.0    0.0018       1.6      23      46 ..     602     625 ..     597     642 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.028
                 HHHHHHHHHHHTT-HHHHHHHH CS
      ANAPC3  25 dayllAlclylngqykrAyell 46 
                 ++yllA++l+   +++r+ e++
  KHJ30909.1  83 NSYLLAKSLFDCREFDRCAEVF 104
                 68999**********9999986 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.24
                 HHHHHHHHHTT-HHHHHHHHHCT CS
      ANAPC3  27 yllAlclylngqykrAyellrka 49 
                 +l++l+l + ++ ++A+++l k+
  KHJ30909.1 219 FLYGLVLAKKKDEEEAMRWLIKS 241
                 899****************9877 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.015
                 HHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT CS
      ANAPC3   9 iflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLk 70 
                 + ++ r+l+ ++  +++  l +  + ++++ + A+e +r+a ++n k+ +++y ++q++  L+
  KHJ30909.1 399 VQYFRRALTLDRSFLSAWTLMGHEYVELKNTHAAIESYRRAvDINRKDYRAWYGLGQTYEVLE 461
                 556777777777777788888999999**************************9999997775 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.025
                 T-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3   3 nnyknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 +n++ Ai  + r++  +++++ + y l++++  ++ +  A+ ++++a +l++ + + +   +qcl ++++ +e i+aL++
  KHJ30909.1 427 KNTHAAIESYRRAVDINRKDYRAWYGLGQTYEVLEMHAYALWYYKRAsGLRPWDGKMWQAVGQCLKQMGRDQESIKALKR 506
                 57788888889999777888888888999999999999999999999999999999999999999999999999999986 PP

  == domain 5  score: 9.0 bits;  conditional E-value: 0.0018
                 HHHHHHHHHHHHHTT-HHHHHHHH CS
      ANAPC3  23 pedayllAlclylngqykrAyell 46 
                 ++++++lA+   ++g+y+rA++l 
  KHJ30909.1 602 SKARMWLAKYAMRTGDYERALQLG 625
                 6899****************9985 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0       1.5   1.3e+03       5      33 ..     303     331 ..     287     332 .. 0.67
   2 ?   -0.6   0.0       2.5   2.2e+03       2      33 ..     402     433 ..     401     434 .. 0.84
   3 !    9.7   0.0    0.0013       1.2       2      26 ..     436     460 ..     435     467 .. 0.89
   4 ?    1.7   0.0      0.46   4.1e+02       2      33 ..     470     501 ..     469     502 .. 0.87
   5 ?    3.1   0.0      0.17   1.5e+02      12      33 ..     527     548 ..     526     549 .. 0.90
   6 ?    2.1   0.2      0.35   3.2e+02      14      34 .]     603     623 ..     602     623 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 1.5
      TPR_17   5 aleldPnnadaynnLAelllknGdlmtAr 33 
                  +e  P ++  ++ L+   ++ +d+ tA+
  KHJ30909.1 303 LAEVFPQSPFILTSLGIMAYHTKDFVTAE 331
                 45666667777777777666777776665 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 2.5
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 +++al ld +   a+++++  + +++++  A+
  KHJ30909.1 402 FRRALTLDRSFLSAWTLMGHEYVELKNTHAAI 433
                 78999999999999999999998988888887 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.0013
      TPR_17   2 ylkaleldPnnadaynnLAelllkn 26 
                 y++a++++ ++  a++ L+++++ +
  KHJ30909.1 436 YRRAVDINRKDYRAWYGLGQTYEVL 460
                 99********************855 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.46
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 y++a  l P + + ++  +++l++ G+ ++ +
  KHJ30909.1 470 YKRASGLRPWDGKMWQAVGQCLKQMGRDQESI 501
                 788888899*****************998865 PP

  == domain 5  score: 3.1 bits;  conditional E-value: 0.17
      TPR_17  12 nadaynnLAelllknGdlmtAr 33 
                 +++ + + A++++++G+ ++A+
  KHJ30909.1 527 DPEILLEIANAYERLGNEAEAK 548
                 6889999**********99997 PP

  == domain 6  score: 2.1 bits;  conditional E-value: 0.35
      TPR_17  14 daynnLAelllknGdlmtArq 34 
                 +a   LA++  + Gd+++A+q
  KHJ30909.1 603 KARMWLAKYAMRTGDYERALQ 623
                 56778999999********97 PP

>> DUF3856  Domain of Unknown Function (DUF3856)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.1       0.1        91      65     126 ..     382     439 ..     378     446 .. 0.67
   2 !   18.0   0.2   2.7e-06    0.0024      64     126 ..     449     507 ..     445     522 .. 0.93
   3 ?   -2.7   0.1       6.3   5.6e+03     106     124 ..     534     552 ..     529     570 .. 0.62

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.1
                 HHHTT-HHHHHHHHHHHHHHHHHH--TTSTHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHH CS
     DUF3856  65 laklgrydealesadkalryfnrrGeleqdeGklWiaavfsravaleelGrkdealkafrma 126
                  + +g+y + ++s +k+++yf r   l++   + W       ++ + el +++ a++++r a
  KHJ30909.1 382 CVVIGNYYSLISSHEKSVQYFRRALTLDRSFLSAW----TLMGHEYVELKNTHAAIESYRRA 439
                 56789999999999*******99888776554444....33344445555555555555555 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 2.7e-06
                 HHHHTT-HHHHHHHHHHHHHHHHHH--TTSTHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHH CS
     DUF3856  64 alaklgrydealesadkalryfnrrGeleqdeGklWiaavfsravaleelGrkdealkafrma 126
                 a+ +lg+  e le  + al y+ r   l+  +Gk+W a+    +++l+++Gr +e++ka++ a
  KHJ30909.1 449 AWYGLGQTYEVLEMHAYALWYYKRASGLRPWDGKMWQAV----GQCLKQMGRDQESIKALKRA 507
                 7899********************************887....89**************9987 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 6.3
                 HHHHHHHTT-HHHHHHHHH CS
     DUF3856 106 ravaleelGrkdealkafr 124
                  a a+e lG+++ea  +++
  KHJ30909.1 534 IANAYERLGNEAEAKSYME 552
                 5677788888877754443 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.37   3.3e+02       9      31 ..     222     244 ..     221     245 .. 0.86
   2 ?   -0.6   0.0       1.5   1.3e+03       5      25 ..     314     334 ..     313     341 .. 0.84
   3 ?    0.8   0.0      0.53   4.8e+02       8      31 ..     385     408 ..     381     410 .. 0.85
   4 ?    1.4   0.1      0.34   3.1e+02       9      34 ..     420     445 ..     418     445 .. 0.82
   5 ?    1.7   0.0      0.28   2.5e+02      12      29 ..     491     508 ..     488     510 .. 0.91
   6 !    8.3   0.6    0.0024       2.1       5      30 ..     531     556 ..     529     556 .. 0.92
   7 ?    1.7   0.0      0.28   2.5e+02       5      24 ..     605     624 ..     601     629 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.37
      TPR_10   9 analrqrgrydeAealleealai 31 
                 + +l + ++ +eA+++l++++ i
  KHJ30909.1 222 GLVLAKKKDEEEAMRWLIKSVHI 244
                 6788888999*********9987 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.5
      TPR_10   5 lnNLanalrqrgrydeAeall 25 
                 l+ L+++ ++++++  Aea++
  KHJ30909.1 314 LTSLGIMAYHTKDFVTAEAHF 334
                 789**********99999987 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.53
      TPR_10   8 LanalrqrgrydeAealleealai 31 
                 ++n+++    ++++++++++al +
  KHJ30909.1 385 IGNYYSLISSHEKSVQYFRRALTL 408
                 688888888899*********975 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.34
      TPR_10   9 analrqrgrydeAealleealairrr 34 
                 ++ + ++++ ++A + +++a++i r+
  KHJ30909.1 420 GHEYVELKNTHAAIESYRRAVDINRK 445
                 55678889999999999999999775 PP

  == domain 5  score: 1.7 bits;  conditional E-value: 0.28
      TPR_10  12 lrqrgrydeAealleeal 29 
                 l q+gr +e+ + l++al
  KHJ30909.1 491 LKQMGRDQESIKALKRAL 508
                 689*************98 PP

  == domain 6  score: 8.3 bits;  conditional E-value: 0.0024
      TPR_10   5 lnNLanalrqrgrydeAealleeala 30 
                 l  +ana+ ++g+ +eA  ++e +la
  KHJ30909.1 531 LLEIANAYERLGNEAEAKSYMETCLA 556
                 6689********************97 PP

  == domain 7  score: 1.7 bits;  conditional E-value: 0.28
      TPR_10   5 lnNLanalrqrgrydeAeal 24 
                 +  La +  ++g+y++A++l
  KHJ30909.1 605 RMWLAKYAMRTGDYERALQL 624
                 5679999999*******997 PP

>> DUF1955  Domain of unknown function (DUF1955)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       3.4   3.1e+03      99     143 ..     361     404 ..     346     407 .. 0.69
   2 !   15.7   0.1     1e-05    0.0094      75     143 ..     487     553 ..     482     567 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 3.4
                 TT-HHHHHHHHHHH---S-HHHHHHHHHHHHHTT-HHHHHHHHHH CS
     DUF1955  99 kgkkdqldkilkelkneikaelllkianalkklgdereanellkk 143
                 + k   l +i  ++++  ++e  + i+n +  + ++ ++ +  ++
  KHJ30909.1 361 RPKLSFLAHICSNVDK-FRPETCVVIGNYYSLISSHEKSVQYFRR 404
                 4444556677777776.8899999999999999888887766665 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 1e-05
                 HHHHHHHTT---HHHHHHHHHHHHTT-HHHHHHHHHHH---S-HHHHHHHHHHHHHTT-HHHHHHHHHH CS
     DUF1955  75 viecyvklnklseyvdlaldvlvkkgkkdqldkilkelkneikaelllkianalkklgdereanellkk 143
                 v +c  ++++++e +     +l++ ++ d++++  k+ +  +++e+ll+iana+++lg+e ea+  ++ 
  KHJ30909.1 487 VGQCLKQMGRDQESIKALKRALISDSHYDKVNN--KDRSGILDPEILLEIANAYERLGNEAEAKSYMET 553
                 557888888888888776677777777776664..33344478********************998865 PP

>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.1    0.0033         3      12      32 ..     218     240 ..     215     242 .. 0.77
   2 ?    0.9   0.0      0.94   8.4e+02      24      35 ..     396     407 ..     390     409 .. 0.84
   3 ?   -0.0   0.5       1.8   1.6e+03      24      33 ..     464     473 ..     448     476 .. 0.71
   4 ?    2.0   0.0      0.41   3.7e+02      14      32 ..     592     610 ..     584     614 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0033
        Sel1  12 lylnGl.g.vpkDpekAiewyek 32 
                  +l+Gl    +kD+e+A++w+ k
  KHJ30909.1 218 EFLYGLvLaKKKDEEEAMRWLIK 240
                 6799**653455********987 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.94
        Sel1  24 ekAiewyekAAe 35 
                 ek ++++++A  
  KHJ30909.1 396 EKSVQYFRRALT 407
                 899*******76 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 1.8
        Sel1  24 ekAiewyekA 33 
                   A+ +y++A
  KHJ30909.1 464 AYALWYYKRA 473
                 4599999999 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.41
        Sel1  14 lnGlgvpkDpekAiewyek 32 
                  nG+gv +  +kA+ w+ k
  KHJ30909.1 592 GNGTGVTAATSKARMWLAK 610
                 699999999*******987 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.6   3.2e+03     137     157 ..     143     163 ..     138     170 .. 0.77
   2 ?    6.3   0.5    0.0052       4.7     153     239 ..     386     472 ..     376     480 .. 0.74
   3 ?    5.1   0.0     0.012        11     147     176 ..     482     511 ..     479     526 .. 0.89
   4 ?    2.5   0.0     0.076        68     145     184 ..     527     566 ..     517     568 .. 0.84
   5 ?   -1.2   0.1         1   9.2e+02       8      29 ..     602     623 ..     597     632 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.6
      TPR_15 137 eeeeaaeqsaafllaraelyr 157
                  + ++++q ++fl+++a++ +
  KHJ30909.1 143 RKFPQLSQKSLFLSLYAKFIS 163
                 4567899**********9866 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0052
      TPR_15 153 aelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgrraeLrellkawkara...esdasLwgplaaAlllLgrpkkALeylrk 239
                 +++y+  + ++++++ +r+Al+l+    ++   +   +++l+++    ++++ ++++    ++d + w  l+  +  L+  + AL y+++
  KHJ30909.1 386 GNYYSLISSHEKSVQYFRRALTLDRSFLSAWTLMGHEYVELKNTH---AAIESYRRAVdinRKDYRAWYGLGQTYEVLEMHAYALWYYKR 472
                 567777778888899999999988773333333335566666666...688888877788888888999999999999999999988876 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.012
      TPR_15 147 afllaraelyrqegqtdaAlrdyreAlala 176
                  +++a+++  +q g+ +++++++++Al  +
  KHJ30909.1 482 KMWQAVGQCLKQMGRDQESIKALKRALISD 511
                 69************************9765 PP

  == domain 4  score: 2.5 bits;  conditional E-value: 0.076
      TPR_15 145 saafllaraelyrqegqtdaAlrdyreAlalapdsselra 184
                 ++ +ll  a++y++ g++++A   ++  la + +sse+ +
  KHJ30909.1 527 DPEILLEIANAYERLGNEAEAKSYMETCLAQEEGSSEIHE 566
                 5677888899999999999999999999999999998876 PP

  == domain 5  score: -1.2 bits;  conditional E-value: 1
      TPR_15   8 lnealklatllykqgdvkkAle 29 
                 ++ ++ la+ ++++gd+++Al+
  KHJ30909.1 602 SKARMWLAKYAMRTGDYERALQ 623
                 4567778888888888888886 PP

>> Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       2.5   2.2e+03      17      40 ..     395     418 ..     391     425 .. 0.87
   2 ?    6.6   0.1    0.0093       8.4       7      32 ..     534     559 ..     529     566 .. 0.88
   3 ?    2.1   0.1      0.24   2.1e+02      12      30 ..     613     631 ..     608     648 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 2.5
                 HHHHHHHHHHHHHHTTS-HHHHHH CS
  Fis1_TPR_C  17 YseArryvdalLeiEPenrQaqsL 40 
                 ++++ +y ++ L ++ ++  a +L
  KHJ30909.1 395 HEKSVQYFRRALTLDRSFLSAWTL 418
                 78999********99999988776 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0093
                 HHHHHHHHT-HHHHHHHHHHHHHHTT CS
  Fis1_TPR_C   7 lAlGhyklgeYseArryvdalLeiEP 32 
                 +A ++ +lg+  eA+ y++++L+ E 
  KHJ30909.1 534 IANAYERLGNEAEAKSYMETCLAQEE 559
                 688999****************9986 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.24
                 HHHT-HHHHHHHHHHHHHH CS
  Fis1_TPR_C  12 yklgeYseArryvdalLei 30 
                 ++ g+Y++A+++   l++ 
  KHJ30909.1 613 MRTGDYERALQLGTELCQD 631
                 599*******998777765 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       7.7   6.9e+03       4      20 ..     219     235 ..     218     236 .. 0.84
   2 ?   -2.2   0.0       9.8   8.8e+03      10      31 ..     321     342 ..     317     342 .. 0.77
   3 ?    3.3   0.0      0.17   1.5e+02      10      28 ..     423     441 ..     415     443 .. 0.85
   4 ?    3.0   0.1      0.21   1.9e+02       7      26 ..     488     507 ..     486     509 .. 0.91
   5 ?   11.5   0.2   0.00042      0.38       3      28 ..     531     556 ..     529     559 .. 0.91
   6 ?    1.6   0.8       0.6   5.4e+02       2      21 ..     604     623 ..     603     624 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 7.7
                 HHHHHHHHHHHHHHHHH CS
       TPR_6   4 yklalsyrklgdtdkAl 20 
                 ++ +l + k +d ++A+
  KHJ30909.1 219 FLYGLVLAKKKDEEEAM 235
                 67899999988999998 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 9.8
                 HHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6  10 yrklgdtdkAlealerlikeYP 31 
                  + ++d  +A + + +l++ +P
  KHJ30909.1 321 AYHTKDFVTAEAHFANLLTLHP 342
                 4556699999999999999988 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.17
                 HHHHHHHHHHHHHHHHHHH CS
       TPR_6  10 yrklgdtdkAlealerlik 28 
                 y +l++t +A+e ++r ++
  KHJ30909.1 423 YVELKNTHAAIESYRRAVD 441
                 78899***********986 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.21
                 HHHHHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAlealerl 26 
                 +++++++g+ +++++al+r 
  KHJ30909.1 488 GQCLKQMGRDQESIKALKRA 507
                 89***************996 PP

  == domain 5  score: 11.5 bits;  conditional E-value: 0.00042
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAlealerlik 28 
                 l+ +a +y++lg+ ++A+ ++e ++ 
  KHJ30909.1 531 LLEIANAYERLGNEAEAKSYMETCLA 556
                 899*******99**********9875 PP

  == domain 6  score: 1.6 bits;  conditional E-value: 0.6
                 HHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAle 21 
                 A ++la+   ++gd+++Al+
  KHJ30909.1 604 ARMWLAKYAMRTGDYERALQ 623
                 7789997666788*****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (665 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.64u 0.30s 00:00:00.94 Elapsed: 00:00:00.45
# Mc/sec: 4446.96
//
Query:       KHJ30910.1  [L=917]
Description: putative coatomer subunit gamma-2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.5e-116  389.3   0.4   3.2e-116  389.0   0.4    1.1  1  Adaptin_N        Adaptin N terminal region
    1.3e-53  181.2   5.9    2.5e-53  180.3   5.9    1.5  1  COP-gamma_platf  Coatomer gamma subunit appendage platform su
    3.4e-32  111.0   0.0    1.1e-31  109.4   0.0    2.0  1  Coatomer_g_Cpla  Coatomer subunit gamma-1 C-terminal appendag
      1e-15   57.9   3.0    3.9e-11   43.2   0.1    4.7  5  HEAT_2           HEAT repeats
    2.8e-09   37.2  11.2     0.0018   18.4   0.1    4.8  4  Cnd1             non-SMC mitotic condensation complex subunit
     0.0012   19.3   1.7        2.7    8.9   0.1    5.2  5  HEAT_PBS         PBS lyase HEAT-like repeat
  ------ inclusion threshold ------
      0.024   14.8   0.8          1    9.5   0.0    3.5  3  RTP1_C1          Required for nuclear transport of RNA pol II
       0.15   10.8   0.0       0.45    9.3   0.0    1.7  2  DUF5010          Domain of unknown function (DUF5010)
       0.19   12.1   6.6        6.5    7.3   0.2    5.0  5  HEAT             HEAT repeat


Domain annotation for each model (and alignments):
>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  389.0   0.4  1.6e-119  3.2e-116       5     523 ..      22     557 ..      18     558 .. 0.97

  Alignments for each domain:
  == domain 1  score: 389.0 bits;  conditional E-value: 1.6e-119
                 CCHHHHHHCCSSS-SCHHHHHHHHHHHHHHHCT---G.....HHHHHHHCCCCSS-CHHHHHHHHHHHHHCTTSCCHHCCCCHHHHHHCC.SSSHHHHH CS
   Adaptin_N   5 iqqelaeilnsnkdddekkkeavkkliylialGedvs.....flffevvklvaskdfelKrlvYlylellaeesedlalLvtnslqkDlk.dpnqlirg 97 
                 + qe a+++ns+++++++++  ++k++ l+++Ge+++      lff + kl++ kd +l+++v+l++++la+++ed +++vt++++kD    ++ ++r 
  KHJ30910.1  22 VFQE-ARLFNSSPIQPRRCRILLTKIALLLYSGERFPvneatTLFFGISKLFQNKDASLRQMVHLIIKELANSAED-IIMVTSTIMKDTGgGRDAIYRP 118
                 4566.999**************************88888888**********************************.***********87699****** PP

                 HHHHHHCCC--CCCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCTT-SSH.....................HHHHHHHHH CS
   Adaptin_N  98 lALrvLssirvpelaedlapaikkllkdrspyvrkkAalailklykkdpdllrkqlveeikellsdkdp.....................gvvlaAval 175
                 +A+r+L++i+++++++++++ +k++++d++p+v+++A++++++l+ +  d +r++  +e++++ s+ +                      + +++A+ l
  KHJ30910.1 119 NAIRALCRIIDASTVQSIERVMKTAIVDKNPSVSSAALVSSYHLLPIARDVVRRW-QSETQDAASSGKSsggyslgfsssgsqmpannstMTQYHAIGL 216
                 ******************************************************6.********99998899*************************** PP

                 HHHHHCCCCCCCHHHHHHHCCHHHHHHCS-HHHHHHHHHHHCC---SSHHHH..HHHHHHHCGGCGCSSCHHHHHHHHHCCHCCCCST.HHHCCHHCHH CS
   Adaptin_N 176 leeikkndrlllkllpklvrrLcnllteldpwlqvkiiklltrlarqepeerskkellesllnllqssnnaVlletvnlivelapkne.livlavnaLv 273
                 l++++ nd++   +l+k+v+++     + +p +++ +++l  +la++++++r  k +++ l  +l+++n++V +e++++i ++ + ++  +++ + +L+
  KHJ30910.1 217 LYQMRINDKM---ALSKMVQQYGAPGAVKSPAAILLLVRLAAQLAEEDQQLR--KPMMQLLDGWLRHKNEMVNFEAAKAICDMRDVTDaEVTQSIHVLQ 310
                 ****999999...78888888887779*************************..89***************************999887899******* PP

                 HHHHSSCCTCHHHHHCHHHHHHHHXXTTTTTTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHHHHHHHHHHTTSSXXHHHHHHHHHHHHHHHHHSC CS
   Adaptin_N 274 rllsskdenlryvaLrtllkivkkepkavqhldlkifllktdddvsirlkaldlllklvdesNvkeivkeLkkyvkevadedfksklvkaIgrlaekfa 372
                  +l+s++   +++a+r l+  ++ +p+avq+++ +i+ll+++ ++si+++a+++llk+++es+v++++k++  +++++ de fk+ +v+aI+ l+ kf+
  KHJ30910.1 311 MFLTSPRAVSKFAAIRILHNFASFKPNAVQSCNPDIELLISNSNRSIATYAITTLLKTGNESSVDRLMKQISGFMTDITDE-FKITIVDAIRVLCLKFP 408
                 ******************************************************************************777.***************** PP

                 CHHHHHHHHHHHHHTTXXHHH.HHHHHHHHHHHHHHSTTTSTTCHHHHCCTCCGXXSHHHHHHHHHHHHHTTTTXTT...HHHHHHCTTTTTTTSXHHH CS
   Adaptin_N 373 tdaewvldvllellslsgesv.kdeivevirdliqkvpelheeiiekLaellekieseearaaaiWllGeygelvsntesasdllrslaekfvlesekv 470
                 ++++ +l++l  +l+++g++  k+++ve++ dli+ vp+++e ++++L+e++e++e++++  ++++llG +g+++s+   +++++r++++++vle+++v
  KHJ30910.1 409 SKQSGMLTFLSGILRDEGGFEfKRAVVESMFDLIKFVPDSKEDALAHLCEFIEDCEFTKLAVRILHLLGIEGPKTSQ---PTKYIRYIYNRVVLENAIV 504
                 ***************9987656******************************************************9...******************* PP

                 HHHHHHHHHHHHHCXGCC.THXHHHHHHHHHHHXXSHHHHHHHHHHHHHHCCX CS
   Adaptin_N 471 klqiltalvKlyltspdketqekliqlvlslatssdlevrdRaveylqllssa 523
                 +++++tal+K++  ++d+e++++++ l++++++++d+evrdRa + l+l+s++
  KHJ30910.1 505 RAAAVTALAKFGIGQKDAEVKRSVTVLLTRCLDDLDDEVRDRAAMNLRLMSQS 557
                 **************************************************997 PP

>> COP-gamma_platf  Coatomer gamma subunit appendage platform subdomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.3   5.9   1.3e-56   2.5e-53       2     151 ..     652     799 ..     651     800 .. 0.93

  Alignments for each domain:
  == domain 1  score: 180.3 bits;  conditional E-value: 1.3e-56
  COP-gamma_platf   2 eyaeqlaaipefaelGkllksskpveLTesetEYvVsvvKhifkehiVlqfnikNtledqvLenvsvqlepeeeelfeevfiipiekLkynepg 95 
                      + +++l+ ipe++++G +lk+s+ veLTesetEYvV++vKhifkehiV+q+ ikNtl+d+vLe+vsv+++p++e++ ee fiip++kL ++  g
       KHJ30910.1 652 KSQQELMLIPEIKHFGDVLKTSSVVELTESETEYVVTAVKHIFKEHIVIQYYIKNTLPDTVLEDVSVVATPSDEDELEEDFIIPVTKLITDVVG 745
                      6789*******************************************************************777777777************** PP

  COP-gamma_platf  96 svyvvlkrpseeeeklvsatfsntLkFtvkevdpstgepeeedgyeDeYqledlel 151
                      +vyv++++ s e+    +++f+n+LkFt+ke+dpstgepee+ gy+DeYq+edlel
       KHJ30910.1 746 TVYVSFRKLSGEK-SFPASSFTNVLKFTTKEIDPSTGEPEET-GYDDEYQVEDLEL 799
                      *******876645.566666*******************777.***********97 PP

>> Coatomer_g_Cpla  Coatomer subunit gamma-1 C-terminal appendage platform
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.4   0.0   5.3e-35   1.1e-31       1     115 []     802     916 ..     802     916 .. 0.98

  Alignments for each domain:
  == domain 1  score: 109.4 bits;  conditional E-value: 5.3e-35
                      GGGEEE---S-HHHHHHHH-ST.T-EEEEEEESS---HHHHHHHHHHHHT-EE-TTTT---SS-SEEEEEEEEEETTS-EEEEEEEEEE..SS. CS
  Coatomer_g_Cpla   1 sDyikpvavsnFeaaWeelese.aeavetfaLssvksleeavdkliellgmqplegsdkvpenassHtLklaGkfvggekvlvrarlalssskg 93 
                      sDy+ pv ++nF+++We+++++ ++a+et +Ls ++s+ +a d+l+++l +qpleg+d  p n+s+HtLkl+Gk+++g++v+v++r+a+ss++g
       KHJ30910.1 802 SDYVIPVLTGNFNHIWEQVGASgEQAEETLQLSGMSSIADATDQLVKTLCLQPLEGTD-IPVNTSTHTLKLFGKTITGGRVAVNVRMAFSSKSG 894
                      7*********************999*********************************.*********************************** PP

                      EEEEEEEEESSHHHHHHHHHH- CS
  Coatomer_g_Cpla  94 vtlkltvRsedeevaelvlsav 115
                      vt k+ vR+++e++ +l+l+++
       KHJ30910.1 895 VTSKIVVRADEEAIPTLILASI 916
                      ******************9876 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.1     0.038        76      17      52 ..     117     156 ..     111     158 .. 0.67
   2 ?    5.3   0.1     0.013        26      31      83 ..     266     324 ..     237     329 .. 0.63
   3 ?    3.4   0.0     0.052     1e+02      10      69 ..     314     379 ..     306     387 .. 0.70
   4 ?    1.0   0.0      0.28   5.6e+02       7      69 ..     348     379 ..     343     438 .. 0.65
   5 !   43.2   0.1   1.9e-14   3.9e-11       1      88 []     453     552 ..     453     552 .. 0.92

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.038
      HEAT_2  17 rraairaLgrignpealpaLvell....ededpavRraaa 52 
                 r +airaL ri + ++++ + +++     d++p v  aa 
  KHJ30910.1 117 RPNAIRALCRIIDASTVQSIERVMktaiVDKNPSVSSAAL 156
                 5689999999988755444444442113789999988885 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.013
      HEAT_2  31 ealpaLve.llededpavRraaaeaLgaigd......pealpaLkellddddddvvReaA 83 
                 + +  L++ +l++++++v  +aa+a+  ++d       +++ +L++ l+++  +v + aA
  KHJ30910.1 266 KPMMQLLDgWLRHKNEMVNFEAAKAICDMRDvtdaevTQSIHVLQMFLTSP-RAVSKFAA 324
                 333333343779**************9887533333344777777777654.44445555 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.052
      HEAT_2  10 ndpdpevrraairaLgrign..p....ealpaLvellededpavRraaaeaLgaigdpealpaLke 69 
                 ++p    + aair L ++++  p    ++ p +  l++++++ +   a+++L + g++++++ L +
  KHJ30910.1 314 TSPRAVSKFAAIRILHNFASfkPnavqSCNPDIELLISNSNRSIATYAITTLLKTGNESSVDRLMK 379
                 555555566778888855542222342445566666699999999999999999999999999875 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.28
      HEAT_2   7 alendpdpevrraairaLgrignpealpaLvellededpavRraaaeaLgaigdpealpaLke 69 
                 +l                                +++++ +   a+++L + g++++++ L +
  KHJ30910.1 348 LLI-------------------------------SNSNRSIATYAITTLLKTGNESSVDRLMK 379
                 344...............................44555555555555555555555554433 PP

  == domain 5  score: 43.2 bits;  conditional E-value: 1.9e-14
      HEAT_2   1 ldaLlqalendpdpevrraairaLg.....rignpealpaLvellededpavRraaaeaLgaig.......dpealpaLkellddddddvvReaAaeaL 87 
                 l++L++++e++++++++ ++++ Lg     + +++++++++ + +  e++ vR+aa++aL+++g        ++++ +L+ +++dd dd+vR +Aa +L
  KHJ30910.1 453 LAHLCEFIEDCEFTKLAVRILHLLGiegpkTSQPTKYIRYIYNRVVLENAIVRAAAVTALAKFGigqkdaeVKRSVTVLLTRCLDDLDDEVRDRAAMNL 551
                 579************************99888999****************************87777554488**********************998 PP

      HEAT_2  88 a 88 
                 +
  KHJ30910.1 552 R 552
                 5 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.1      0.17   3.3e+02      58      96 ..      62     100 ..      38     108 .. 0.77
   2 !   13.5   0.1   2.8e-05     0.057       3      55 ..     117     171 ..     115     178 .. 0.93
   3 !    8.0   0.4    0.0014       2.8      46     134 ..     255     342 ..     240     367 .. 0.83
   4 !   18.4   0.1   8.9e-07    0.0018      21     105 ..     488     574 ..     468     608 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.17
        Cnd1  58 g.flselaklleDenprVvanalaalteiseksenaiynl 96 
                   +++ + kl ++++++ +++++++++e+++ +e++i+ +
  KHJ30910.1  62 TtLFFGISKLFQNKDASLRQMVHLIIKELANSAEDIIM-V 100
                 34888899999999999999999999999999855554.3 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 2.8e-05
        Cnd1   3 RalairtlgcirvpnlveylvepLrkrLkDedpyVRktaaivvakL..ilndmvk 55 
                 R +air+l+ i   ++v+ +   +++++ D++p V   a++   +L  i +d+v+
  KHJ30910.1 117 RPNAIRALCRIIDASTVQSIERVMKTAIVDKNPSVSSAALVSSYHLlpIARDVVR 171
                 88********************************************999998876 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0014
        Cnd1  46 akLilndmvkekgflselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalnecsewgqitilefLlsyipkdkqea 134
                 a+L ++d    k +++ l   l+ +n++V   a  a++++ + + +a +++ +++++ ++++   +s+ + i il   +s++p+  q  
  KHJ30910.1 255 AQLAEEDQQLRKPMMQLLDGWLRHKNEMVNFEAAKAICDMRDVT-DAEVTQSIHVLQMFLTSPRAVSKFAAIRILHNFASFKPNAVQSC 342
                 45577888888889999999***********************9.67778889999999999********************9987755 PP

  == domain 4  score: 18.4 bits;  conditional E-value: 8.9e-07
        Cnd1  21 ylvepLrkrLkDedpyVRktaaivvakL.ilndmvkekg.flselaklleDenprVvanalaalteiseksenaiynllpdiiskls 105
                 +++  +++r+  e++ VR  a+ ++ak  i ++  ++k  +   l ++l+D +++V++ a + l  +s+ +++ i  ++ +  + l+
  KHJ30910.1 488 KYIRYIYNRVVLENAIVRAAAVTALAKFgIGQKDAEVKRsVTVLLTRCLDDLDDEVRDRAAMNLRLMSQSDDSVIRFVNNENTYALQ 574
                 578889999999*****************877777777758888899***********************98877666666666665 PP

>> HEAT_PBS  PBS lyase HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       2.4   4.8e+03      10      25 ..     239     254 ..     226     256 .. 0.86
   2 ?    3.1   0.0       0.1   2.1e+02       4      25 ..     286     313 ..     283     315 .. 0.88
   3 ?   -2.1   0.0       4.7   9.5e+03      15      27 .]     450     462 ..     442     462 .. 0.85
   4 !    8.9   0.1    0.0014       2.7       1      23 [.     504     533 ..     504     538 .. 0.86
   5 ?    0.9   0.1      0.51     1e+03      14      24 ..     904     914 ..     901     916 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 2.4
                 HHCTSGGGHHHHHHHC CS
    HEAT_PBS  10 gqlgdeeaipaLleaL 25 
                 g++++++ai +L+++ 
  KHJ30910.1 239 GAVKSPAAILLLVRLA 254
                 677889***9999876 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.1
                 HHHHHHHHCTS......GGGHHHHHHHC CS
    HEAT_PBS   4 aAakaLgqlgd......eeaipaLleaL 25 
                 +Aaka+  ++d      +++i +L+  L
  KHJ30910.1 286 EAAKAICDMRDvtdaevTQSIHVLQMFL 313
                 7***********9999999999998665 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 4.7
                 GGGHHHHHHHCTC CS
    HEAT_PBS  15 eeaipaLleaLqd 27 
                 e+a+++L+e  +d
  KHJ30910.1 450 EDALAHLCEFIED 462
                 7899***999886 PP

  == domain 4  score: 8.9 bits;  conditional E-value: 0.0014
                 HHHHHHHHHHHCTS.......GGGHHHHHH CS
    HEAT_PBS   1 vRraAakaLgqlgd.......eeaipaLle 23 
                 vR+aA+ aL+++g        ++++ +Ll 
  KHJ30910.1 504 VRAAAVTALAKFGIgqkdaevKRSVTVLLT 533
                 9*************9999999888888875 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.51
                 SGGGHHHHHHH CS
    HEAT_PBS  14 deeaipaLlea 24 
                 deeaip+L+ a
  KHJ30910.1 904 DEEAIPTLILA 914
                 79******977 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.42   8.4e+02      20      81 ..      79     141 ..      68     157 .. 0.61
   2 ?    9.5   0.0   0.00052         1      19      79 ..     246     306 ..     238     327 .. 0.93
   3 ?    0.1   0.0      0.46   9.1e+02      15      51 ..     504     541 ..     498     558 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.42
     RTP1_C1  20 lvlLrkliekkskeavldiekilkllleaLkdedsYvYL.naikgLvaLadvfpeevlklLle 81 
                 l+++ +li k+ +++++di  +++++++      + +Y  nai++L+ ++d+ + + ++++++
  KHJ30910.1  79 LRQMVHLIIKELANSAEDIIMVTSTIMKDTGGGRDAIYRpNAIRALCRIIDASTVQSIERVMK 141
                 555555555555444444444444444444433344553388888888888888777777665 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00052
     RTP1_C1  19 glvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeevlklL 79 
                 +++lL +l+ +  +e+++  + +++ll   L+++++ v  +a k+++ + dv ++ev++ +
  KHJ30910.1 246 AILLLVRLAAQLAEEDQQLRKPMMQLLDGWLRHKNEMVNFEAAKAICDMRDVTDAEVTQSI 306
                 8999****************************************************99875 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.46
     RTP1_C1  15 vrahglvlLrkl.iekkskeavldiekilkllleaLkd 51 
                 vra +++ L+k  i +k++e + +++ +l+ +l+ L d
  KHJ30910.1 504 VRAAAVTALAKFgIGQKDAEVKRSVTVLLTRCLDDLDD 541
                 89*******99856777766666666666666666666 PP

>> DUF5010  Domain of unknown function (DUF5010)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00023      0.45      32     114 ..      70     155 ..      52     219 .. 0.80
   2 ?   -2.9   0.0       1.1   2.3e+03      41      68 ..     785     813 ..     770     823 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00023
     DUF5010  32 plfkpkasdedewWDnlveelayagldfvavnvRGllpeaakdndagdPrklkdl...vaAlkrrgvedklKiaifdDtpaslsaa 114
                  lf+ k+++  ++   +++ela++  d ++v+   +++     +  ++P++++ l   ++A   + +e  +K ai+d +p+  saa
  KHJ30910.1  70 KLFQNKDASLRQMVHLIIKELANSAEDIIMVTSTIMKDTGGGRDAIYRPNAIRALcriIDASTVQSIERVMKTAIVDKNPSVSSAA 155
                 5899999999999999****************99999988888888999877665111677777888999**********965554 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.1
     DUF5010  41 edewWDnl.veelayagldfvavnvRGll 68 
                 e+++ D++ ve+l   g d+v++ + G  
  KHJ30910.1 785 ETGYDDEYqVEDLELFGSDYVIPVLTGNF 813
                 5667777669***********99988865 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       2.7   5.4e+03      10      21 ..     145     156 ..     138     158 .. 0.82
   2 ?   -1.6   0.0       2.3   4.7e+03       2      26 ..     269     293 ..     268     294 .. 0.81
   3 ?   -1.7   0.0       2.5     5e+03       5      29 ..     308     333 ..     307     334 .. 0.79
   4 ?    3.9   0.1     0.041        82      13      27 ..     501     515 ..     500     518 .. 0.86
   5 ?    7.3   0.2    0.0033       6.5       4      28 ..     531     555 ..     529     557 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.7
                 T-SSHHHHHHHH CS
        HEAT  10 sDpspeVReaAa 21 
                  D++p+V +aA+
  KHJ30910.1 145 VDKNPSVSSAAL 156
                 69*****99996 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.3
                 HHHHHHHHT-SSHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLga 26 
                 + ll  +l++++  V   Aaka+++
  KHJ30910.1 269 MQLLDGWLRHKNEMVNFEAAKAICD 293
                 6788889999999998888888876 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 2.5
                 HHHH.HT-SSHHHHHHHHHHHHHHHH CS
        HEAT   5 llkl.lsDpspeVReaAakaLgalae 29 
                 +l++ l++p +    aA++ L ++a+
  KHJ30910.1 308 VLQMfLTSPRAVSKFAAIRILHNFAS 333
                 566646888888899****9999997 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.041
                 SHHHHHHHHHHHHHH CS
        HEAT  13 speVReaAakaLgal 27 
                 ++ VR+aA+ aL+++
  KHJ30910.1 501 NAIVRAAAVTALAKF 515
                 778*********986 PP

  == domain 5  score: 7.3 bits;  conditional E-value: 0.0033
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                 ll ++l D + eVR+ Aa +L  ++
  KHJ30910.1 531 LLTRCLDDLDDEVRDRAAMNLRLMS 555
                 477889**************98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (917 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       622  (0.0346924); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.70u 0.31s 00:00:01.01 Elapsed: 00:00:00.45
# Mc/sec: 6091.12
//
Query:       KHJ30911.1  [L=284]
Description: putative dihydrofolate reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-64  218.0   0.0    1.4e-64  217.6   0.0    1.0  1  FSH1           Serine hydrolase (FSH1)
     0.0019   18.8   0.0     0.0038   17.9   0.0    1.4  1  Abhydrolase_6  Alpha/beta hydrolase family
     0.0039   17.0   0.1        4.8    6.9   0.0    3.1  3  Abhydrolase_2  Phospholipase/Carboxylesterase
     0.0077   15.5   0.0      0.042   13.1   0.0    2.1  3  Hydrolase_4    Serine aminopeptidase, S33
  ------ inclusion threshold ------
      0.088   12.3   0.0        7.7    5.9   0.1    2.2  2  Esterase_phd   Esterase PHB depolymerase
      0.095   12.3   0.2       0.96    9.0   0.1    2.4  2  Abhydrolase_1  alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> FSH1  Serine hydrolase (FSH1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.6   0.0   4.7e-68   1.4e-64       3     209 ..      23     266 ..      20     269 .. 0.95

  Alignments for each domain:
  == domain 1  score: 217.6 bits;  conditional E-value: 4.7e-68
        FSH1   3 kkkkiLcLhGytqsgeiFraktsalrkllkk...............lnvelvyldaplelaekadlpkseseeeekseeeeesraWfrkkdekneyegl 86 
                 +k+kiL+LhGytqsg  F+akt+al+k l+k                +++l+y++ap++l +++++p+  s +e+ + e+ + +aW+++++++++y+gl
  KHJ30911.1  23 RKLKILMLHGYTQSGPSFHAKTRALEKILEKqissrgnasclpgylGGLQLIYPTAPFRL-STQEIPGFLSGSEK-TDEDIDRWAWWTREKDCDKYKGL 119
                 689******************************************99*************.9999***9888775.99********************* PP

        FSH1  87 eesldavkdyikengpfdGiiGFSqGaalaallaslleellkea........................shpslkfailvsGfkleepkyeeyyeedkiq 161
                 e++l++++d+i++n  +dG+iGFSqGaa aal+aslle+++++                             lkfa+++sGf++ +p y++++ e+kiq
  KHJ30911.1 120 EQGLATIADVIRANDGIDGVIGFSQGAAAAALVASLLEPGRRQIfdqvheeddqtlafpkewydlnsmVPNGLKFAVAYSGFQPSHPAYRAFF-EPKIQ 217
                 *****************************************988****************9999987444456********************.***** PP

        FSH1 162 tptLhvlGelDtvvdeerseaLaeafkns.skvlkHpggHfvPnkkeyv 209
                 tptLh++G+lDtv de+rs+aL+e++  + +k+++HpggHfvPn k++v
  KHJ30911.1 218 TPTLHFIGSLDTVLDEARSKALVEKCVLEkRKLVFHPGGHFVPNDKRMV 266
                 **************************9988****************987 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   1.3e-06    0.0038       1     209 [.      27     259 ..      27     265 .. 0.51

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 1.3e-06
                    EEEE--GC.....GC..HHHHHHHHCCTC..EEEEE--TTS.T......................................S-GGCS--HHHCHHH CS
  Abhydrolase_6   1 vlllHGagssassWl..vapLaallaagv..hvlapDlpGh.G......................................rsdpppldledladl 53 
                    +l+lHG   s+ s++  ++ L + l +++  +  a  lpG+ G                                      +++ + + +  l++ 
     KHJ30911.1  27 ILMLHGYTQSGPSFHakTRALEKILEKQIssRGNASCLPGYlGglqliyptapfrlstqeipgflsgsektdedidrwawwTREKDCDKYKGLEQG 122
                    799999888899995566666333333321122366678887557777777777666666666666444332222222222112222333332222 PP

                    HHHHCCTT.....TTSE.EEEEETCHHHHHHHHHHCC..EEEEES-..----TTTS----TTHHHHHHTT-C.CCCHCCHS-HSCCCCHHHC.... CS
  Abhydrolase_6  54 aalldelaa...gggpv.vlvGHSlGGalalaaaplalvvgvlldppptalpagllaaalelllallallrl.lawlsreplprlfladeda.... 140
                    +a++++++    g   +  ++G S+G+a a++   +a     ll+p       g ++ + ++++   + l++  +w  +   + ++++        
     KHJ30911.1 123 LATIADVIRandG---IdGVIGFSQGAAAAAL---VA----SLLEP-------GRRQIFDQVHEEDDQTLAFpKEWYDL---N-SMVP---Nglkf 194
                    4444444333333...3466********8888...77....89999.......22333333333333333332366642...2.3333...21111 PP

                    CCCHCHCCCGHHHHCCHHCHTTCCHHTT-TTGCEEECTT-CHHHHCHHCCCHSTTEEET...CE...SSS-H CS
  Abhydrolase_6 141 daawrarlarlaallaglgllpaaawadlpvpllvlggeDplvprllerllaqagarlp...vvlpgaGHlp 209
                     +a+      ++a++a+++     +  ++p++ ++ g+ D ++ +   ++l+ ++++l+    v+  +GH++
     KHJ30911.1 195 AVAYSGFQPSHPAYRAFFE-----PKIQTPTLHFI-GSLDTVLDEARSKALV-EKCVLEkrkLVFHPGGHFV 259
                    1333333334444444333.....66666666655.8888877777666666.7777766667777788854 PP

>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.11   3.4e+02      16      38 ..      26      47 ..      12      70 .. 0.65
   2 !    5.3   0.0    0.0052        16     109     122 ..     139     153 ..     117     163 .. 0.77
   3 !    6.9   0.0    0.0016       4.8     129     201 ..     191     259 ..     181     276 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.11
                   EEEEE--TT--SHHHHHHHH.TT CS
  Abhydrolase_2 16 vviflHGlGdsghawaeaaktea 38
                    +++lHG+  sg ++   ++   
     KHJ30911.1 26 KILMLHGYTQSGPSFHAKTR-AL 47
                   47788888888866666555.33 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0052
                    EEEETHHHHHH.HHH CS
  Abhydrolase_2 109 igGFSqGaala.lyl 122
                    ++GFSqGaa a l +
     KHJ30911.1 139 VIGFSQGAAAAaLVA 153
                    79*****97541555 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0016
                    --SEEEEES---TTGGGTTTTS-GGGGG-EEEEEEETT-SSS-HHHHHHHHHHHHTTS-GEEEEEETT--SS- CS
  Abhydrolase_2 129 klggivafsgalplsqklessatavtkklpilqiHgeeDpvvplalgkaakevlkkllkkvelksyeglaHsi 201
                     l+ +va+sg+ p++++   ++++   ++p l+  g+ D v++ a +ka+    +k++ +  + +++ ++H  
     KHJ30911.1 191 GLKFAVAYSGFQPSHPAYR-AFFEPKIQTPTLHFIGSLDTVLDEARSKAL---VEKCVLEKRKLVFHPGGHFV 259
                    566789************9.6888889***************97766555...44555555555666666655 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.75   2.2e+03       4      27 ..      24      47 ..      21      49 .. 0.73
   2 ?   -1.3   0.0      0.34     1e+03      80      95 ..     139     155 ..     111     164 .. 0.70
   3 !   13.1   0.0   1.4e-05     0.042     188     233 ..     214     258 ..     210     264 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.75
  Hydrolase_4  4 kavvvlvHGlaehsgryaelaeaL 27
                 k  ++++HG++++   ++  ++aL
   KHJ30911.1 24 KLKILMLHGYTQSGPSFHAKTRAL 47
                 667999999998887777666665 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.34
  Hydrolase_4  80 llGhSmGGliallyl.l 95 
                  ++G S G++ a+l++ l
   KHJ30911.1 139 VIGFSQGAAAAALVAsL 155
                  89999999999998843 PP

  == domain 3  score: 13.1 bits;  conditional E-value: 1.4e-05
  Hydrolase_4 188 akitlPllllhGeaDkvvdpeasrelyerlgskdktlklypglyHe 233
                  +ki++P+l ++G+ D+v d++ s++l+e++  ++ +l   + + H 
   KHJ30911.1 214 PKIQTPTLHFIGSLDTVLDEARSKALVEKCVLEKRKLVF-HPGGHF 258
                  689***************************985555555.444565 PP

>> Esterase_phd  Esterase PHB depolymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0    0.0098        29      18      38 ..      26      46 ..      16      55 .. 0.82
   2 ?    5.9   0.1    0.0026       7.7      63     116 ..     103     154 ..      94     175 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0098
  Esterase_phd 18 lvvmlhGctqsveefaaGtrm 38
                   ++mlhG tqs   f a tr 
    KHJ30911.1 26 KILMLHGYTQSGPSFHAKTRA 46
                  478*************99994 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0026
  Esterase_phd  63 cwnwyk.dtd.raGrGeaavvvalvdalvdehrvdaarvyvaGlsaGaaladllal 116
                    w w+  ++d  + +G  + +++++d +  + ++d       G+s Gaa a l+a 
    KHJ30911.1 103 RWAWWTrEKDcDKYKGLEQGLATIADVIRANDGIDGV----IGFSQGAAAAALVAS 154
                   59999754442567899999***************85....555555555555543 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.8   5.4e+03       3      18 ..      27      42 ..      27      47 .. 0.84
   2 ?    9.0   0.1   0.00032      0.96     187     252 ..     201     259 ..      92     263 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.8
                   EEEE-STTTCGGGGTT CS
  Abhydrolase_1  3 lvilhGlpgssdvwae 18
                   +++lhG++ s+ ++++
     KHJ30911.1 27 ILMLHGYTQSGPSFHA 42
                   6899***999988876 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00032
                    HHHHHHHHCCHHHHHHHHHCTHHHHSEEEEEEETTCSSSCHHHHHHHHHC..HTSEEEEEEETCSSSH CS
  Abhydrolase_1 187 ksieqwpttdsaklllrlrelknvlaptlvisgtsDplvppkaledlaql..lpkkrlvvisdagHla 252
                    +  ++++++++  +  +++       ptl ++g+ D + ++  +  l ++  l  kr++v+ ++gH++
     KHJ30911.1 201 FQPSHPAYRAF--FEPKIQT------PTLHFIGSLDTVLDEARSKALVEKcvLE-KRKLVFHPGGHFV 259
                    33333333333..3344445......***************7777777776555.5**********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       303  (0.0169); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.44u 0.29s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2027.01
//
Query:       KHJ30912.1  [L=371]
Description: putative alpha beta knot [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     6e-106  354.1   0.0   7.1e-106  353.9   0.0    1.0  1  Methyltrn_RNA_3  Putative RNA methyltransferase
  ------ inclusion threshold ------
      0.082   13.6   1.2        2.1    9.1   0.0    2.8  3  Big_5            Bacterial Ig-like domain
       0.12   13.0   0.8       0.73   10.4   0.6    2.1  2  Deltaretro_Tax   Deltaretrovirus Tax protein


Domain annotation for each model (and alignments):
>> Methyltrn_RNA_3  Putative RNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  353.9   0.0  1.2e-109  7.1e-106       1     285 [.      47     362 ..      47     363 .. 0.97

  Alignments for each domain:
  == domain 1  score: 353.9 bits;  conditional E-value: 1.2e-109
  Methyltrn_RNA_3   1 tvsiaiPssiisnaqsleqktylagqIARaaaiFnVdeivvfddseseeekkek........................pseflarlLqYletPp 70 
                      tvs+a+P+siisnaqs+eqkt+lag+IARa+++F+Vdeiv+f d++s+e ++++                        p++fl +lL+YletPp
       KHJ30912.1  47 TVSVALPGSIISNAQSQEQKTALAGNIARALSVFCVDEIVIFSDGHSHEVSSKRtskqkttfdcqdsltvneytgnsdPDHFLVHLLSYLETPP 140
                      89******************************************99998777668999************************************ PP

  Methyltrn_RNA_3  71 YLrkelFplhkelkyaglLppldaphhlrsseegeyreGvvvekskekkskkklVniGlkkevklelkqevpegtRVtVkl..........sse 154
                      +Lrk lFplh++l++ag+L++ld+phhl+ +e+++yreGv+ + s+ek++   +V+ Gl+ +v++ +  ++p++tRVt+++          s++
       KHJ30912.1 141 HLRKLLFPLHPNLRTAGTLHSLDLPHHLKPHEWCQYREGVTFRGSNEKST---YVEAGLRIPVTIRE--KIPPNTRVTLRFmsgakdandnSAS 229
                      ********************************************997776...**************..********************99889 PP

  Methyltrn_RNA_3 155 esveakvVspsepreeaglywGYsVrlakslsavftespfeggydlsigtsergekveeklaelekkk.efkhllivfGgvrgleaaleadeel 247
                      e + a+ Vsp+epree+g ywG++Vr a++ls+vfte++f +gydl+igtserg+++e+  ++ e+++ +f+hlli +Ggv+gle a+++d el
       KHJ30912.1 230 EVILASRVSPDEPREEDGFYWGFHVRKAEKLSDVFTECKFGDGYDLTIGTSERGSDIETLYSDNEQRIeKFSHLLICIGGVSGLEMAVKNDIEL 323
                      999*****************************************************************88*********************999 PP

  Methyltrn_RNA_3 248 .klegekaeelFdlwlntvpnqgsrtirtEEavliaLal 285
                       +l + +a+++Fd w+n++p+qgsrtirtEEa++i+La+
       KHJ30912.1 324 rNLGVVDAQDVFDRWINICPRQGSRTIRTEEALWIGLAR 362
                      9999*********************************97 PP

>> Big_5  Bacterial Ig-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.35   2.1e+03      52      71 ..      22      42 ..       4      81 .. 0.57
   2 ?    1.5   0.0      0.08   4.8e+02      41      77 ..      85     118 ..      70     122 .. 0.81
   3 ?    9.1   0.0   0.00036       2.1      57      96 ..     188     229 ..     174     238 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.35
       Big_5 52 tavtgs.ydasgktvtitpsa 71
                 +  g+ +d+s+ t++++p++
  KHJ30912.1 22 STSNGTeIDTSKPTAVFQPTK 42
                222233566777777777775 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.08
       Big_5  41 atvialsdsettavtgsydasgktvtitpsaeLaant 77 
                 ++++  sd+++ +v+++ ++s+++ t++ +++L+ n+
  KHJ30912.1  85 IVIF--SDGHSHEVSSK-RTSKQKTTFDCQDSLTVNE 118
                 3344..89999999998.7788999********9885 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.00036
       Big_5  57 s..ydasgktvtitpsaeLaanttYtvtitagikDlagnala 96 
                 +  y  +g ++ +t++++  +nt+ t+ + +g+kD++ n+++
  KHJ30912.1 188 KstYVEAGLRIPVTIREKIPPNTRVTLRFMSGAKDANDNSAS 229
                 0346689999***************************99543 PP

>> Deltaretro_Tax  Deltaretrovirus Tax protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.6   0.00012      0.73      33      69 ..     140     178 ..     130     184 .. 0.85
   2 ?   -0.5   0.0       0.3   1.8e+03      10      27 ..     350     367 ..     345     370 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00012
  Deltaretro_Tax  33 srlrgalf..gppasarpsrhlsrasdhlgphrwtryrl 69 
                     ++lr  lf  +p   ++ + h    + hl ph w +yr 
      KHJ30912.1 140 PHLRKLLFplHPNLRTAGTLHSLDLPHHLKPHEWCQYRE 178
                     68888887668999999999999**************96 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.3
  Deltaretro_Tax  10 vrtesslripslrvwrlc 27 
                     +rte +l+i   r+ +l 
      KHJ30912.1 350 IRTEEALWIGLARMKKLV 367
                     79*******999988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2677.48
//
Query:       KHJ30913.1  [L=145]
Description: putative glycosyl [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       507  (0.0282782); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1064.10
//
Query:       KHJ30914.1  [L=70]
Description: hypothetical protein EV44_g4178 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00019   21.3   0.2     0.0002   21.2   0.2    1.0  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.2   1.1e-08    0.0002      62     118 ..       2      57 ..       1      58 [. 0.83

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 1.1e-08
  Exo_endo_phos_2  62 efleehslsllnllksgptfkssngsstiDltltsdnlals...kleleeedlgSDHrpi 118
                      e+l+++++s +++ +  pt+++    +++Dl+++s++l+++   +  +++ d++SDH+pi
       KHJ30914.1   2 EWLDAKNISFISEID-APTHNR---VNMLDLCFSSHPLLVKgctASVQQDLDVTSDHLPI 57 
                      788999999888876.677744...588*************99877788889******99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       185  (0.0103185); expected 358.6 (0.02)
Passed bias filter:                      174  (0.00970495); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.42
# Mc/sec: 500.55
//
Query:       KHJ30915.1  [L=192]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       741  (0.0413297); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1340.32
//
Query:       KHJ30916.1  [L=103]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0014   19.0   0.1     0.0019   18.6   0.1    1.2  1  GP68      Phage protein Gp68
  ------ inclusion threshold ------
      0.022   14.8   0.0      0.027   14.5   0.0    1.1  1  ArfGap    Putative GTPase activating protein for Arf


Domain annotation for each model (and alignments):
>> GP68  Phage protein Gp68
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.1   2.1e-07    0.0019      18      61 ..      24      67 ..      10      73 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 2.1e-07
        GP68 18 etagvlrmrraGykGaailkllklrGtrlvnqmqraldaetaaa 61
                   ++ r  r+G   ++ lk+++l G r  + + ra  ae+ a+
  KHJ30916.1 24 SRKCLARATRNGAPTKEQLKIIRLAGDREFQAVLRAKAAEERAS 67
                457999*********************************99885 PP

>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0     3e-06     0.027      36      96 ..      13      74 ..       8      94 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3e-06
                -HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG..-TTCG CS
      ArfGap 36 CieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekr..sksss 96
                C +C g Hrs  ++    r +++   ++e+l++++  g+++++++l ak  +e+ +  +++s+
  KHJ30916.1 13 CRNCGGPHRSD-SRKCLARATRNGAPTKEQLKIIRLAGDREFQAVLRAKAAEERASvlEGNSD 74
                **********8.677789*******************************98777766633333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       685  (0.0382063); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 740.97
//
Query:       KHJ30917.1  [L=1067]
Description: putative duf1339 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-80  270.4   0.4      2e-80  269.9   0.4    1.3  1  RIC1      RIC1
  ------ inclusion threshold ------
       0.37   11.7   2.3         16    6.5   0.1    4.3  5  WD40      WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> RIC1  RIC1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  269.9   0.4   2.2e-84     2e-80       2     250 ..     790    1034 ..     789    1036 .. 0.96

  Alignments for each domain:
  == domain 1  score: 269.9 bits;  conditional E-value: 2.2e-84
        RIC1    2 enslwlfdgedikvwldlleiesa.deskkes.leesvripldfypLsvlldkgiilGvesevslrrslsfalfrletktqlfLhhvLrqlLernll 96  
                   nslw+f+g++ik w +++++ +  + s+  + +++  +ip+dfypLs+ +++giilG+ese+ ++r+++f+lf+l+++t+lf+++vL++ L++ + 
  KHJ30917.1  790 YNSLWIFEGNEIKGWPNVKDLLQVtS-SEIGReISTMFSIPVDFYPLSIQFERGIILGLESELIQTRNINFTLFKLAIRTRLFIPQVLQFQLSQFDH 885 
                  69******************999954.433333899************************************************************* PP

        RIC1   97 eeAlelassyqklsyFahaLElLLhevLeeeadakepsdaseeeealLpavvefldefpeyldvvvqCaRKtevarWrtLfdvlgsPkeLFeeclel 193 
                  ++Al+la+++q l+yFah+LE+LL++ Le+e+d+++p     +e+ lLp+v++fl+ fp++ld++vqC+RKte+++W+tLf++l++P+eLFee++++
  KHJ30917.1  886 TAALNLAQKFQGLDYFAHSLEILLYNTLEQEVDTRSP-----TESILLPTVLSFLSMFPQFLDIIVQCTRKTEIRSWHTLFKYLPPPHELFEESIKK 977 
                  *********************************9988.....789**************************************************** PP

        RIC1  194 eklktAasyLlvLqnleeleessqdavrLLklaleekdwelckdLlRFlaaidesge 250 
                  ++lktAa++++++q+l+e+ +ss+  +rL+ +a +e+dw+lc++L+ Fl a+d+sg+
  KHJ30917.1  978 GSLKTAAGFMVIVQTLDESGTSSELLIRLFLRAKNEEDWTLCEELANFLIALDPSGD 1034
                  ******************************************************997 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.9   1.7e+04      15      26 ..     113     124 ..      95     134 .. 0.63
   2 ?   -2.0   0.0       0.9   8.1e+03      11      22 ..     267     278 ..     261     278 .. 0.83
   3 ?    1.2   0.0     0.085   7.7e+02      23      37 ..     365     379 ..     324     380 .. 0.67
   4 ?    6.5   0.1    0.0018        16      13      30 ..     406     423 ..     390     430 .. 0.81
   5 ?   -3.1   0.0         2   1.7e+04      16      29 ..     551     563 ..     541     564 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.9
                 EEEEETTSSEEE CS
        WD40  15 slafspdgawla 26 
                 sl+ s++g+++a
  KHJ30917.1 113 SLKISRSGHLFA 124
                 566666666654 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.9
                 SSEEEEEEETTS CS
        WD40  11 ssvtslafspdg 22 
                 ssv ++++ pd+
  KHJ30917.1 267 SSVQCIRWTPDS 278
                 579***999996 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.085
                 SEEEEEETTSEEEEE CS
        WD40  23 awlasGsdDgtvriW 37 
                 +++a G+ Dgt+ ++
  KHJ30917.1 365 SLIAIGCLDGTIQVY 379
                 33888999****987 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.0018
                 EEEEEEETTSSEEEEEET CS
        WD40  13 vtslafspdgawlasGsd 30 
                  t+la+spdg  l++G +
  KHJ30917.1 406 LTCLAYSPDGYCLFAGYE 423
                 79***********99974 PP

  == domain 5  score: -3.1 bits;  conditional E-value: 2
                 EEEETTSSEEEEEE CS
        WD40  16 lafspdgawlasGs 29 
                 +  spd +++a ++
  KHJ30917.1 551 V-ISPDARYIAVAG 563
                 4.79*****98554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1067 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 7392.33
//
Query:       KHJ30918.1  [L=254]
Description: putative casein kinase ii beta subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-74  248.0   0.5    6.4e-74  247.7   0.5    1.1  1  CK_II_beta  Casein kinase II regulatory subunit


Domain annotation for each model (and alignments):
>> CK_II_beta  Casein kinase II regulatory subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.7   0.5   3.6e-78   6.4e-74       2     182 .]      15     194 ..      14     194 .. 0.98

  Alignments for each domain:
  == domain 1  score: 247.7 bits;  conditional E-value: 3.6e-78
  CK_II_beta   2 WiswflslkgneyfvevdedfiedkfnltgLseevpnykealelildveeeeeleeseksevessaelLYgliHaryiltkkglakmlekykkkefgrC 100
                 W +wf+s++gneyf+e+ded+++d+fnltgL++ev++y+ al+li+dv e +  +++ ++ +e+sa++LYgl+Haryi+t++glakmlekykk++fg+C
  KHJ30918.1  15 WRDWFISSRGNEYFCEIDEDYLTDRFNLTGLNTEVQYYQYALDLIMDVFELD-CDDEMREVIEKSARHLYGLVHARYIVTTRGLAKMLEKYKKADFGKC 112
                 99*********************************************87755.899******************************************* PP

  CK_II_beta 101 prvlCekqkvLPvGlsdkpgektvklyCpkCedvYspkssrsrsidGafFGttfphlllltypelepkkskekyepriyGfk 182
                 prv+C+++++LP+G++d p+ k vklyC kCed+Y+pks+r++ +dGa+FGt+f +++l++yp l p+ks +++ pr+yGfk
  KHJ30918.1 113 PRVMCKSHPLLPTGQTDIPNLKPVKLYCTKCEDLYNPKSNRHSYMDGAYFGTSFHNIILQVYPALIPHKSYDRHIPRVYGFK 194
                 *********************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       828  (0.0461822); expected 358.6 (0.02)
Passed bias filter:                      607  (0.0338558); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 2030.82
//
Query:       KHJ30919.1  [L=182]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0039   16.5   0.2     0.0055   16.0   0.2    1.2  1  CDO_I     Cysteine dioxygenase type I
  ------ inclusion threshold ------
      0.015   15.0   0.0      0.021   14.6   0.0    1.2  1  DUF4588   Domain of unknown function (DUF4588)


Domain annotation for each model (and alignments):
>> CDO_I  Cysteine dioxygenase type I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.2   6.2e-07    0.0055      97     150 ..       9      64 ..       2      71 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 6.2e-07
                 EES-EE..EEEE----SS-----EEEEEE--TT-EEEE-TTT-EEEEEES-SSS-E CS
       CDO_I  97 laGeLk..EtkfAwalkrleesdivdekrllsngtayvndelglHrveNlSsdegA 150
                  +G+L    +k+Aw++k+  e+++ ++k + sn+    ++ l + + eN S++ +A
  KHJ30919.1   9 SKGNLEaiKNKLAWRKKKRMEMEKMENKSKVSNKSNANDKTLCVNNPENSSHQLDA 64 
                 56777633699*****************999999999999999********99766 PP

>> DUF4588  Domain of unknown function (DUF4588)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   2.4e-06     0.021      88     126 ..       9      48 ..       3      80 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.4e-06
     DUF4588  88 qkGyqrrirDllaWvkkrrreirredlisflcgkaep.ek 126
                 +kG+++ i++ laW kk+r e+ + ++ s   +k++  +k
  KHJ30919.1   9 SKGNLEAIKNKLAWRKKKRMEMEKMENKSKVSNKSNAnDK 48 
                 79********************999999998888877333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1105  (0.061632); expected 358.6 (0.02)
Passed bias filter:                      608  (0.0339115); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 1467.12
//
Query:       KHJ30920.1  [L=1386]
Description: putative glycosyltransferase family 28 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-31  107.9   2.9    8.3e-20   70.8   0.0    3.5  3  GRAM             GRAM domain
    3.7e-28   98.3   0.0    9.9e-28   96.9   0.0    1.8  1  Glyco_transf_28  Glycosyltransferase family 28 N-terminal dom
    7.3e-14   52.2   0.1      1e-12   48.5   0.1    2.6  2  PH               PH domain
    4.5e-05   23.7   0.2    0.00025   21.3   0.3    2.1  2  PH_8             Pleckstrin homology domain
    0.00027   21.3   2.1     0.0017   18.7   2.1    2.4  1  PH_11            Pleckstrin homology domain
  ------ inclusion threshold ------
      0.012   16.0   0.1      0.054   13.9   0.0    2.0  2  PH_2             Plant pleckstrin homology-like region
      0.012   14.5   0.0      0.021   13.7   0.0    1.3  1  UDPGT            UDP-glucoronosyl and UDP-glucosyl transferas


Domain annotation for each model (and alignments):
>> GRAM  GRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.2     4e-10     1e-06       3      56 ..     205     256 ..     203     260 .. 0.91
   2 !    6.9   0.0    0.0022       5.6      41      67 ..     349     375 ..     347     386 .. 0.89
   3 !   70.8   0.0   3.2e-23   8.3e-20       2     106 ..     712     814 ..     711     820 .. 0.95

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 4e-10
                 HHHHS----TT--EEEEEEEEEESS.SEEEEEEEEESSEEEEEE-STT---EEE CS
        GRAM   3 frkkfkellpeEkllatykCyllrdggpvqGrlyltnyrlcFrskplgsskkvv 56 
                  +++f+ l   E+++++y C l+ + ++ qG +y+t++++cF+   ++ s  vv
  KHJ30920.1 205 LKEIFS-LETAEEVIEEYPCCLMNS-VLLQGYMYITKKHICFYAYLPKKSNEVV 256
                 588999.****************99.******************9999887765 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0022
                 EEEEEE-STT---EEEEEGGGEEEEEE CS
        GRAM  41 rlcFrskplgsskkvvlpladikriek 67 
                 +++F+s + g+s+k+ lp++ + +ie 
  KHJ30920.1 349 KIIFQSHNEGDSVKISLPINNVIDIEE 375
                 79*******************988876 PP

  == domain 3  score: 70.8 bits;  conditional E-value: 3.2e-23
                 HHHHHS----TT--EEEEEEEEEESS.SEEEEEEEEESSEEEEEE-STT---EEEEEGGGEEEEEE....-TT-TT-EEEEESS-..EEEEE--TTHHH CS
        GRAM   2 lfrkkfkellpeEkllatykCyllrdggpvqGrlyltnyrlcFrskplgsskkvvlpladikriekstsaanllengiqvetsskdlelaFagfvtrde 100
                 +fr++f+ l++ Ekl+aty+  l+r  +p +G++y++++  cFrs+ +g+s+k++lpl di++  k+++ +  + +++ v+ ++++l ++F  + trd+
  KHJ30920.1 712 RFREHFS-LPETEKLHATYFGFLNRV-LPLYGKIYISDQSFCFRSLLPGTSTKLILPLIDIENADKENGFRFGYSGLVVVIRGHEELFFEFPQSETRDD 808
                 79*****.****************99.***********************************************************************9 PP

                 HHHHHH CS
        GRAM 101 aiefie 106
                 +  +++
  KHJ30920.1 809 CAVTLL 814
                 876554 PP

>> Glyco_transf_28  Glycosyltransferase family 28 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.9   0.0   3.9e-31   9.9e-28       2     139 .]     894    1028 ..     893    1028 .. 0.88

  Alignments for each domain:
  == domain 1  score: 96.9 bits;  conditional E-value: 3.9e-31
                       EEEE-SSHHHHHHHHHHHHHHHCTT-EEEEEEETCCCHHHHHHCCT-EEEE---G.......HCTT...CHHHHCCHHHHHHHHHHHHHHHH CS
  Glyco_transf_28    2 vllggGTgGhvfPalAlakeLkkegheVrylgtkrgleerlveeaglefepiage.......klrrkl.spknlkeilkvlkavvkakkilk 85  
                       + l++G++G+v+P++Al k+L +egh+ r ++t+ ++++++ e++g+ f+ ++g+       + ++ + + ++l       ++    ++ ++
       KHJ30920.1  894 TCLTIGSRGDVQPYIALCKGLLAEGHQAR-IATHIEFKDWV-ESYGIDFKAVSGDpaelmriCIENGMfTYSFL-------REASSKFRGWI 976 
                       6789*************************.**********9.*************9954444333333344444.......555555***** PP

                       HHHHCCCCCCCCCCCHCCCCCHCCCTTHCCCCCHCTS-ECCCCCCCCC-SCCCE CS
  Glyco_transf_28   86 eakpdavvgtggyvslpaviaaplaripviihEqnaipglanktlsrtatkvai 139 
                       ++ +   + ++  ++ + +i++p+a+++++i+E++ ip+++++t+++t+t++++
       KHJ30920.1  977 DELLSSAWVAC--QDSDLLIESPSAMGGIHIAEALEIPYFRAFTMPWTRTRAYP 1028
                       ***********..999***********************************996 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.5   0.1     4e-16     1e-12       1     104 [.     255     351 ..     255     352 .. 0.92
   2 ?    0.3   0.0       0.4     1e+03      61      94 ..     770     807 ..     722     808 .. 0.79

  Alignments for each domain:
  == domain 1  score: 48.5 bits;  conditional E-value: 4e-16
                 EEEEEEEEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHH CS
          PH   1 vvkeGwLlkkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWika 99 
                 vvk+G+L+k g ++  +++++wf Lk+++l+yy ++  +  + ++g i+l+   +  v  +e++k   +f ++++    +r++ ++a+s  ++keW+k 
  KHJ30920.1 255 VVKSGYLYKSGRRNL-KFHRYWFRLKGDVLSYYNDP--SDLYFLRGNIDLRYGISATVASKENSKDAVYFNVVTH----QREFNFKADSVASAKEWVKV 346
                 689************.********************..999999*******999998765668888888888777....79****************** PP

                 HHHHH CS
          PH 100 iqsai 104
                 +q++i
  KHJ30920.1 347 LQKII 351
                 **987 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.4
                 TTSSSSTSEEEE.....EESTSSSTEEEEEEESSHHHHH CS
          PH  61 tedpkrkfcfel.....riverngsrtyllqasseeerk 94 
                  e++++++ f++     ++v r++ ++++++++ +e r 
  KHJ30920.1 770 IENADKENGFRFgysglVVVIRGH-EELFFEFPQSETRD 807
                 557788888888888888888898.********999886 PP

>> PH_8  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.3   9.7e-08   0.00025       3      88 ..     261     350 ..     259     351 .. 0.75
   2 ?   -1.4   0.0       1.2     3e+03      55      85 ..     949     979 ..     934     982 .. 0.79

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 9.7e-08
        PH_8   3 llkkrrkklqgyakRfFvLdlksstlsYyrddnss.alrgkiplsla....iisa..neekreiiidsGaevWeLkasnekdfqeWvealeka 88 
                 l k  r+ l  + + +F L  k   lsYy+d  +   lrg+i l+      ++s   +++   +++ +  + ++ ka++ + ++eWv++l+k+
  KHJ30920.1 261 LYKSGRRNL-KFHRYWFRL--KGDVLSYYNDPSDLyFLRGNIDLRYGisatVASKenSKDAVYFNVVTHQREFNFKADSVASAKEWVKVLQKI 350
                 555555554.589999999..999******99887799***998764111133321123344589*************************987 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.2
        PH_8  55 ekreiiidsGaevWeLkasnekdfqeWveal 85 
                 e  +i i+ G+  ++   + +++f+ W++ l
  KHJ30920.1 949 ELMRICIENGMFTYSFLREASSKFRGWIDEL 979
                 456899********99999999*****9866 PP

>> PH_11  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   2.1   6.7e-07    0.0017       2     104 ..     258     349 ..     257     350 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 6.7e-07
       PH_11   2 kGylkkkgsk..aWkrrwfavlkdgvLeyYksekkkvvkhviklSngseaklkadlisaalfkidsirssksddllleistetkifflkgdsneeteeW 98 
                  Gyl k+g +     r+wf  lk  vL+yY+++ + +             + + dl  +   +++s+++ ++d + +++ t ++ f +k+ds    +eW
  KHJ30920.1 258 SGYLYKSGRRnlKFHRYWF-RLKGDVLSYYNDPSDLY-----------FLRGNIDLRYGISATVASKEN-SKDAVYFNVVTHQREFNFKADSVASAKEW 343
                 79*****99999999****.*****************...........344455555555556666655.57899999********************* PP

       PH_11  99 vealke 104
                 v+ l++
  KHJ30920.1 344 VKVLQK 349
                 **9986 PP

>> PH_2  Plant pleckstrin homology-like region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.3   3.3e+03      46      81 ..     184     219 ..     160     221 .. 0.56
   2 ?   13.9   0.0   2.1e-05     0.054      60     103 ..     310     353 ..     299     355 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.3
        PH_2  46 vVldvskdipawp.reeeeseeeryyfglkTaeglve 81 
                  ++d+  + ++ + r+  +  + + +f l+Tae+++e
  KHJ30920.1 184 PIMDMNVKEKEEHiRNCLSR-KLKEIFSLETAEEVIE 219
                 55555533333332322222.3337888888888876 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 2.1e-05
        PH_2  60 eeeeseeeryyfglkTaeglvefeckskaekkvWvegiknlLsl 103
                 + +e++++++yf + T ++  +f+++s a+ k Wv+ +++++ +
  KHJ30920.1 310 ASKENSKDAVYFNVVTHQREFNFKADSVASAKEWVKVLQKIIFQ 353
                 346777888***************************99998765 PP

>> UDPGT  UDP-glucoronosyl and UDP-glucosyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   8.1e-06     0.021     341     409 ..    1212    1278 ..    1117    1297 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 8.1e-06
       UDPGT  341 tkAFvtHaGangvyEaisnGvPmvglPlFgdqrdNikrmeakgaavtlnvkemtsedllnAlkevindk 409 
                  + A   H+Ga +   ++  G+P ++ P+Fgdq     r+e  g ++ ++ ++   + +  Al +v nd+
  KHJ30920.1 1212 IDAAAHHGGAGTTGASLRAGLPTIVKPFFGDQYFFGSRVEDLGVGIVVKKLN--VSLFSRALWQVCNDE 1278
                  455667999999999**************************99887765554..455778888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1386 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.79u 0.29s 00:00:01.08 Elapsed: 00:00:00.45
# Mc/sec: 9203.15
//
Query:       KHJ30921.1  [L=220]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.19   12.0   0.0       0.33   11.3   0.0    1.3  1  DUF4078   Domain of unknown function (DUF4078)


Domain annotation for each model (and alignments):
>> DUF4078  Domain of unknown function (DUF4078)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.8e-05      0.33      32      49 ..      44      61 ..      37      71 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.8e-05
     DUF4078 32 vgfyaFskDeeeRkkqme 49
                +gf  FskDee+R+k ++
  KHJ30921.1 44 TGFALFSKDEETRQKLLN 61
                89************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       350  (0.0195214); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1540.29
//
Query:       KHJ30922.1  [L=712]
Description: putative p protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-70  237.4   1.2    1.6e-70  237.4   1.2    4.1  3  LIM_bind    LIM-domain binding protein


Domain annotation for each model (and alignments):
>> LIM_bind  LIM-domain binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   3.2      0.26   4.7e+03     158     189 ..      88     125 ..      76     153 .. 0.51
   2 ?  -24.7  32.8         1   1.8e+04     149     171 ..     233     257 ..     157     327 .. 0.57
   3 !  237.4   1.2   8.7e-75   1.6e-70      10     241 .]     354     587 ..     346     587 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.26
    LIM_bind 158 ssaspkvskkvskrqg.ifgklsskepaeepp.....e 189
                 + ++++ +++++ +q+ +f++  + ++ ++++     +
  KHJ30922.1  88 QAQAQAQAQAQLFQQQaMFASNPQLQHMQQQNvqlmaQ 125
                 33444445555555555666666655555555432221 PP

  == domain 2  score: -24.7 bits;  conditional E-value: 1
    LIM_bind 149 klkqllesa..ssaspkvskkvskr 171
                 +++q ++s+  ++ +p +++ ++++
  KHJ30922.1 233 QINQQSSSNlqQTPNPLMQQHHQQQ 257
                 2222222222233333333333333 PP

  == domain 3  score: 237.4 bits;  conditional E-value: 8.7e-75
    LIM_bind  10 lsnrs.nedsdieyWrkfvaefFspdavlrltlkldeqekepkqFeittpllPryfrtlfesgvkslqlildgareqvlsngsivlecdkatfvytyed 107
                 l+ +  ++ +d+++W++fv+ fFsp++vlr++++   +ek++kq+eit+p+lPryf+t+fesg+ks+q+il++  e++l+n+ +++e++k +fvy++e 
  KHJ30922.1 354 LAAQGaKQRDDLNHWTNFVETFFSPKGVLRHSVWV-MDEKSNKQYEITFPALPRYFNTHFESGIKSIQMILERGSEKELPNNFHYIESQKSSFVYWFES 451
                 5555569****************************.55589********************************************************** PP

    LIM_bind 108 gsrvvlegqlrvlfdadlkIewlefavrsheeliprsalekklkqllesa...........ssaspkvskkvskrqgifgklsskepaeeppeavkqlp 195
                 g +vv++g+++++fd+++kIe+lef+++shee++pr ++++++++l+ +            +++sp+++kk+ k ++       ++p+++p   ++  +
  KHJ30922.1 452 GAQVVASGSMKAHFDSHQKIELLEFNTNSHEEYLPRTQVVEAARPLHIWGkewhkvnsspdNKTSPEINKKKPKLMK-------SPPQPPPG--IELPV 541
                 *************************************************999*999988888888888887766544.......55565555..77778 PP

    LIM_bind 196 sspvnsfGitesvmrfLeiaevmssmkdLmsfskknnilsPleaLk 241
                 s+ ++s+Git+sv+rfLe+aevm +m++L+ +s++n++l+P  aL+
  KHJ30922.1 542 SKVKTSMGITHSVFRFLELAEVMIQMNSLFAYSHQNPKLTPSNALD 587
                 88888***************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (712 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2788  (0.155502); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                       113  (0.00630264); expected 17.9 (0.001)
Passed Fwd filter:                        31  (0.00172904); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.10u 0.39s 00:00:01.49 Elapsed: 00:00:00.54
# Mc/sec: 3994.23
//
Query:       KHJ30923.1  [L=291]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2110.89
//
Query:       KHJ30924.1  [L=476]
Description: hypothetical protein EV44_g2552 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.15   12.1   1.3       0.37   10.8   1.3    1.7  1  NECFESHC  SH3 terminal domain of 2nd SH3 on Neutrophil cytoso
       0.35   11.1   5.6       0.21   11.8   1.3    2.5  2  DUF2530   Protein of unknown function (DUF2530)


Domain annotation for each model (and alignments):
>> NECFESHC  SH3 terminal domain of 2nd SH3 on Neutrophil cytosol factor 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.3   4.2e-05      0.37      14      31 ..     148     165 ..     138     176 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 4.2e-05
    NECFESHC  14 kkrkaPPRRStirNAkSI 31 
                 +++k+P RRSt+rN k I
  KHJ30924.1 148 NRNKIPSRRSTLRNLKRI 165
                 5689**********9987 PP

>> DUF2530  Protein of unknown function (DUF2530)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.3   2.4e-05      0.21       3      52 ..     172     224 ..     170     230 .. 0.71
   2 ?    0.2   0.2       0.1   9.1e+02      14      44 ..     286     316 ..     281     324 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.4e-05
     DUF2530   3 pPeLprrLtdprpvivvgtllWlvalvvllvvgdales...wlpvclaGlvvG 52 
                  P++p+r   p  v+ v t lW +al++   + ++ ++   ++ ++++  vvG
  KHJ30924.1 172 RPRIPARKISPLNVVTVLTFLWTCALIIWASFLHDGTAilaLITISMVSSVVG 224
                 599************************98666555555122333344444444 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.1
     DUF2530  14 rpvivvgtllWlvalvvllvvgdaleswlpv 44 
                 r  +  gt+l ++++v+l   g ++++++ +
  KHJ30924.1 286 RTLVGFGTVLLMISVVLLGNCGITMQAAIGI 316
                 5678899999999999998777777666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 3342.51
//
Query:       KHJ30925.1  [L=180]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1378.96
//
Query:       KHJ30926.1  [L=492]
Description: putative lipase b precursor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (492 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 3838.31
//
Query:       KHJ30927.1  [L=311]
Description: hypothetical protein EV44_g6359 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2285.17
//
Query:       KHJ30928.1  [L=290]
Description: putative fad synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      3e-30  105.5   0.0      1e-21   77.7   0.0    2.3  2  PAPS_reduct  Phosphoadenosine phosphosulfate reductase family


Domain annotation for each model (and alignments):
>> PAPS_reduct  Phosphoadenosine phosphosulfate reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   4.8e-10   8.6e-06       2      58 ..      80     165 ..      79     172 .. 0.93
   2 !   77.7   0.0   5.8e-26     1e-21      90     174 .]     172     257 ..     167     257 .. 0.92

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 4.8e-10
                  EEEE--SSCTCHHHHHHHHHHCTTH.............................EEEEEE-STB-HHHHHHHHHHHHHTT-EEEEE CS
  PAPS_reduct   2 lvvsvsgGkdslVllhLalkafkpv.............................pvvfvdtghefpetiefvdeleeryglrlkvy 58 
                  + +s++gGkd+lVll+L l+a                                 + v+v+  h fpe+ +fv   ++ ygl+l  y
   KHJ30928.1  80 ISLSYNGGKDCLVLLILFLSAIATSgvgepktkqtlsspifskskisslfphrlHSVYVMAPHSFPEVDAFVTTSATAYGLDLVRY 165
                  789*******************9966899************************99**************************97655 PP

  == domain 2  score: 77.7 bits;  conditional E-value: 5.8e-26
                  HHHHHHHCT.TECEEE----CCCTTTTTTSSSEEECTTT-SCEEE-CCCT--HHHHHHHHHHCT--B-CCCCTT-SS--BCTTB-S CS
  PAPS_reduct  90 plkkaLekl.dedalltGaRrdesksraklpiveidedfekslrvfPllnWteedvwqyilrenipynpLydqgfrsiGcvpctga 174
                  +l++ Le++   +a+++G Rr++++ +  + + e+d+ ++ ++rv+P+++W++ ++w++il   ipy+ Lydqg++s+G+++ t++
   KHJ30928.1 172 ALTRYLEDNkVIKAIFVGTRRSDPHGKLLTHFNETDNGWPSFMRVHPIIDWSYSEIWAFILHFRIPYCTLYDQGYTSLGGINDTHP 257
                  46677777733579*********************************************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2148.39
//
Query:       KHJ30929.1  [L=101]
Description: hypothetical protein EV44_g4216 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.068   13.2   0.1      0.074   13.1   0.1    1.1  1  DUF3322   Uncharacterized protein conserved in bacteria N-ter


Domain annotation for each model (and alignments):
>> DUF3322  Uncharacterized protein conserved in bacteria N-term (DUF3322)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   4.1e-06     0.074      73     132 ..      33      91 ..      12      97 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.1e-06
     DUF3322  73 rtlGtqelParlvlesledalrllgkekeaerfrallellaalapelrewlerrplrllr 132
                 +++ + e+ + l++++++++++++ k k+ + +++l+ ++ +l  el+ w+err +  ++
  KHJ30929.1  33 QSYERREITEILWIKGEKNLADAMTKAKACDALQKLI-ETNKLDIELEGWVERRDQSNIS 91 
                 34789999****************************9.999*********9999876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       724  (0.0403815); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 783.99
//
Query:       KHJ30930.1  [L=244]
Description: putative holo-acyl-carrier-protein synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-09   38.2   0.1    4.7e-08   33.1   0.1    2.7  1  ACPS      4'-phosphopantetheinyl transferase superfamily


Domain annotation for each model (and alignments):
>> ACPS  4'-phosphopantetheinyl transferase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   0.1   2.6e-12   4.7e-08       2      88 ..      13     152 ..      12     236 .. 0.79

  Alignments for each domain:
  == domain 1  score: 33.1 bits;  conditional E-value: 2.6e-12
                 EEEEEEEHHHHH.HHH----............................................-HHHHHS-HH.HHHHHTT--HHHH........... CS
        ACPS   2 vGiDieklsrlrkrvkrrga............................................kilkriftee.Erkllkssdeear........... 44 
                 vG+Di ++sr+++ ++  ++                                            ++l+r+ft+  E ++  ++++ +r           
  KHJ30930.1  13 VGVDICCVSRIERLLNLTSPskaiwrgintdetsngqtrdsmanesstlnskkidiscrtkqkqRFLRRLFTPYeEFFYQLTRPHIFRdmidlqpslnn 111
                 7777777777776666665577777777777777777777777777777777777777777778**********4555555577777778888888888 PP

                 HHHHHHHHHHHHHHHHHT.TS-SSSS--GGG-EEEE-TTS-EEEE CS
        ACPS  45 aelfarlWaaKEAllKal.gpglrklldfksievledstgrptle 88 
                 ++++a++++aKEA++Ka+ +++l    +f++i vl ++   p ++
  KHJ30930.1 112 YKFIAGRFSAKEAIIKAIrYRQL----SFHDIIVLPRHVELPNID 152
                 99****************55555....888877777666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       559  (0.0311785); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1779.28
//
Query:       KHJ30931.1  [L=178]
Description: putative sequence orphan [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.056   13.7   0.0      0.099   12.9   0.0    1.4  1  NRBF2_MIT  MIT domain of nuclear receptor-binding factor 2


Domain annotation for each model (and alignments):
>> NRBF2_MIT  MIT domain of nuclear receptor-binding factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   5.5e-06     0.099      32      66 ..       3      37 ..       1      44 [. 0.90

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 5.5e-06
   NRBF2_MIT 32 kkaaaylseamkltkseqaqlslelqreshikqll 66
                k a+++  ea k+t s  a++sl l ++s+  ql 
  KHJ30931.1  3 KSASEVTREAAKFTTSSIANISLGLIKDSKFVQLF 37
                67999999*********************999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       266  (0.0148363); expected 358.6 (0.02)
Passed bias filter:                      234  (0.0130515); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1396.34
//
Query:       KHJ30932.1  [L=221]
Description: hypothetical protein EV44_g3972 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
     0.0092   16.3   0.6      0.013   15.8   0.6    1.2  1  YscJ_FliF_C  Flagellar M-ring protein C-terminal


Domain annotation for each model (and alignments):
>> YscJ_FliF_C  Flagellar M-ring protein C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.6   7.5e-07     0.013      52     130 ..      97     175 ..      63     181 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 7.5e-07
  YscJ_FliF_C  52 gvpGalsnqp..........aeteaaeagsnsssskseettnYevdktvshtkkapgsikrlsVaVvvdgkeakplsaeelaqieklvk 130
                  +        p          + t+ + +++++s+ +++  +n+ v ++ +  +++++++++  +++++    + + s+ + ++i+ l++
   KHJ30932.1  97 NL-------PlydnnsdkfnNDTNVNDDNTPKSQHSNNHENNNRVLRQSTRKQQPTWKLRDADISILLQ---SPSFSESRAKEINGLLE 175
                  33.......3455555588655556666666688889999999*************************9...56677777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1700.13
//
Query:       KHJ30933.1  [L=279]
Description: hypothetical protein EV44_g5541 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.13   12.2   0.1        1.7    8.6   0.1    2.2  2  ODV-E18   Occlusion-derived virus envelope protein ODV-E18


Domain annotation for each model (and alignments):
>> ODV-E18  Occlusion-derived virus envelope protein ODV-E18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0     0.024   4.3e+02      35      56 ..     178     199 ..     173     206 .. 0.82
   2 ?    8.6   0.1   9.2e-05       1.7      21      59 ..     227     266 ..     215     274 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.024
     ODV-E18  35 viiillvllvqssstGsdssss 56 
                  i ++l +l++ +stG +  s+
  KHJ30933.1 178 RIAAVLAILLRDTSTGFNPDSP 199
                 577889999999999*998776 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 9.2e-05
     ODV-E18  21 rlePsllltilvvlviiil.lvllvqssstGsdssssnan 59 
                 r  P+llltilv lv++     ++    +tG    s+ ++
  KHJ30933.1 227 RCVPTLLLTILVFLVLVFHsYQVFTAKCATGMTHDSTACP 266
                 5679********9998865144566666777666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 2232.63
//
Query:       KHJ30934.1  [L=275]
Description: hypothetical protein EV44_g0122 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-05   24.5  23.8    1.6e-05   24.5  23.8    3.4  2  Collagen  Collagen triple helix repeat (20 copies)


Domain annotation for each model (and alignments):
>> Collagen  Collagen triple helix repeat (20 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   5.0      0.37   6.7e+03      28      34 ..      44      50 ..      30      89 .. 0.51
   2 !   24.5  23.8     9e-10   1.6e-05       3      56 ..     164     217 ..     136     227 .. 0.70

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.37
                EEEE-TT CS
    Collagen 28 GekGpaG 34
                +++G+ G
  KHJ30934.1 44 AAQGEMG 50
                1111111 PP

  == domain 2  score: 24.5 bits;  conditional E-value: 9e-10
                 XXXXXXXXXXXXXXXX-----XXXXEEEE-TTSS-----------------BB- CS
    Collagen   3 pGepGepGppGppGkrGepGeaGekGekGpaGekGppGaaGkpGapGekGeaGa 56 
                 +G++G++G++G++G++G++G +G +G++G +G +G  G  G +G  G +G +Ga
  KHJ30934.1 164 SGASGASGASGMSGTSGTSGMSGMSGMSGMSGMSGMSGMSGMSGMSGMSGMSGA 217
                 455555555555555555555555555555555555555555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      183  (0.0102069); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2142.13
//
Query:       KHJ30935.1  [L=505]
Description: putative atp synthase beta mitochondrial [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-61  208.0   0.0    1.8e-61  207.5   0.0    1.2  1  ATP-synt_ab    ATP synthase alpha/beta family, nucleotide-bin
    5.2e-24   84.6   1.1    2.1e-23   82.6   0.5    2.3  2  ATP-synt_ab_N  ATP synthase alpha/beta family, beta-barrel do
     0.0082   16.6   0.0       0.59   10.6   0.0    2.6  2  AAA            ATPase family associated with various cellular
  ------ inclusion threshold ------
      0.013   15.4   0.3      0.034   14.1   0.1    1.8  2  RsgA_GTPase    RsgA GTPase
      0.014   14.6   0.4      0.092   11.9   0.1    2.1  2  NB-ARC         NB-ARC domain
       0.02   15.2   1.3       0.47   10.8   0.2    2.5  2  AAA_19         AAA domain
      0.021   14.2   0.2       0.08   12.3   0.1    1.9  2  ATPase         KaiC
      0.023   14.6   0.0      0.073   13.0   0.0    1.7  2  ATPase_2       ATPase domain predominantly from Archaea
      0.025   14.5   0.1       0.12   12.4   0.1    2.1  2  RnfC_N         RnfC Barrel sandwich hybrid domain
       0.05   13.5   0.1       0.13   12.2   0.0    1.7  2  NACHT          NACHT domain
       0.07   13.5   0.0       0.18   12.2   0.0    1.7  1  RNA_helicase   RNA helicase
       0.11   12.9   0.1       0.33   11.3   0.1    1.9  1  AAA_16         AAA ATPase domain
       0.11   11.9   0.0       0.19   11.1   0.0    1.3  1  DUF4618        Domain of unknown function (DUF4618)
       0.16   11.8   0.8       0.63    9.9   0.8    2.0  1  T3SS_ATPase_C  T3SS EscN ATPase C-terminal domain


Domain annotation for each model (and alignments):
>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  207.5   0.0   1.4e-64   1.8e-61       1     213 []     165     383 ..     165     383 .. 0.96

  Alignments for each domain:
  == domain 1  score: 207.5 bits;  conditional E-value: 1.4e-64
                  SSHHHHHHS-EBTT-EEEEEESTTSSHHHHHHHHHHHSSTSS..EEEEEEESEEHHHHHHHHHHCHHSS.....GGGGEEEEEEETTS-HHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab   1 GirvlDalfpivqGqrtlipgafgvGktvisqslskqsnsdd..aiiyvgiGergnevaevleefpegt.....imkrtvlvantsnepvaareasiy 91 
                  Gi+v+D+l p+++G++++++g++gvGktv +q+l+++  +++  ++++ g+Ger++e +++++e++e++       +++ lv+ ++nep+ ar ++++
   KHJ30935.1 165 GIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHggYSVFTGVGERTREGNDLYHEMQETRviqldGESKVALVFGQMNEPPGARARVAL 262
                  99*********************************998887457***********************7744344666********************* PP

                  HHHHHHHHHHH.TTSEEEEEEETHHHHHHHHHHHHHHTTTSBEGGGSBTTHHHHHHHHHTTSEEETSSEEEEEEEEEEE-GGCSTTSHHHHHHHHHSS CS
                  xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  92 tgitlAEyfrd.qgknvlliadslsrwaeAlreislrlgempadqgypaylgaklaslyERagkapdrtGsvtivaavspaggDfsdpvttatlgitd 188
                  tg+t+AEyfrd +g++vll++d+++r+++A  e+s++lg++p++ gy+++l+ ++  ++ER++++  ++Gs+t+v+av+++++D++dp + +t++++d
   KHJ30935.1 263 TGLTIAEYFRDeEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGLMQERITTT--TKGSITSVQAVYVPADDLTDPAPATTFAHLD 358
                  ***********9*****************************************************..88***************************** PP

                  EEEEB-HHHHHTTBSSSBCTTTEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab 189 gfivLdkklaqrkhfPainvlvSvS 213
                  +++vL++ + + +++Pa+++l S S
   KHJ30935.1 359 ATTVLSRGISELGIYPAVDPLESKS 383
                  **********************987 PP

>> ATP-synt_ab_N  ATP synthase alpha/beta family, beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.6   0.5   1.6e-26   2.1e-23       1      69 []      41     108 ..      41     108 .. 0.97
   2 ?   -1.2   0.0       2.4   3.1e+03      48      59 ..     447     458 ..     442     474 .. 0.68

  Alignments for each domain:
  == domain 1  score: 82.6 bits;  conditional E-value: 1.6e-26
                    EEEEETTEEEEESSTSCETCTTEEEEECCETCSTEEEEEEEEEETTEEEEEESS-STTBBTTSEEEEES CS
  ATP-synt_ab_N   1 ivqviGpvvdvefgigrlpgiynalevelvefgtlllgvalnlgedkVrvivmgstdGlsrGteVkrTG 69 
                    i qviG+vvdv+f+ ++lp i+nale++  + ++l+l+va++lge++Vr+i+m++t+Gl+rG++V++TG
     KHJ30935.1  41 IHQVIGAVVDVKFDTEKLPPILNALETKNGD-QKLILEVAQHLGENVVRTIAMDGTEGLVRGHRVTDTG 108
                    67**************************777.************************************9 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 2.4
                    EEEEESS-STTB CS
  ATP-synt_ab_N  48 VrvivmgstdGl 59 
                    ++++v+ + +G+
     KHJ30935.1 447 AVAQVFTGIEGV 458
                    666777776665 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   0.00046      0.59       3      74 ..     183     293 ..     181     303 .. 0.63
   2 ?    2.9   0.0       0.1   1.3e+02      41      74 ..     397     428 ..     380     454 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00046
                 EESSTTSSHHHHHHHHHHHH.....THE.......................EEEEETTTCSSS..................STTHHHHHHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavakel.....gve.......................fleisgsellsk..................yvgesekkirelfkeake 55 
                 l+G  G+GKT +++ +++++     g +                       +++++g     +                   v  +   i+e+f++ +e
  KHJ30935.1 183 LFGGAGVGKTVFIQELINNIakahgGYSvftgvgertregndlyhemqetrVIQLDG-----EskvalvfgqmneppgaraRVALTGLTIAEYFRD-EE 275
                 89*****************64444312233344444444444433333333444444.....0444457777777777777888888888888887.44 PP

                 TSTSEEEEEETGGGHHHHH CS
         AAA  56 kakpsilfiDEidalaksr 74 
                  +  + lfiD+i +++++ 
  KHJ30935.1 276 GQ-DVLLFIDNIFRFTQAG 293
                 44.5899999987776665 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.1
                 HHHHHHHHHHHHHHHTSTS.EEEEEETGGGHHHHH CS
         AAA  41 esekkirelfkeakekakp.silfiDEidalaksr 74 
                 ++++k++++++e k+ ++   il +DE   l +++
  KHJ30935.1 397 DTASKVQQMLQEYKSLQDIiAILGMDE---LSEAD 428
                 68899*******999983335555555...44333 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1   2.6e-05     0.034      89     156 ..     168     235 ..     152     245 .. 0.85
   2 ?   -2.8   0.0         4   5.1e+03      69      93 ..     406     430 ..     394     458 .. 0.47

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.6e-05
                  THHHHHHHCTTSEEEEECSTTSSHHHHHHHHCTT-----S--------------SEEEEEETTTEEEE CS
  RsgA_GTPase  89 gleelkellkdktsvlvGqSGvGKStLinallpelelktgevseklgrGkhTTtavellelaegglli 156
                   ++ l+++ ++  + l G  GvGK+ +i +l+++   + g  s  +g G  T     l++  +++ +i
   KHJ30935.1 168 VVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGERTREGNDLYHEMQETRVI 235
                  56677888888888899***********************************9999999887777776 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 4
                  HHHHHHTTSEEEE--TTTHTTHHHH CS
  RsgA_GTPase  69 keelealgyevllvsaktkegleel 93 
                   +e+++l+  + ++ +++ +++++l
   KHJ30935.1 406 LQEYKSLQDIIAILGMDELSEADKL 430
                  3333333333333333322222222 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   7.2e-05     0.092      23      55 ..     181     213 ..     168     249 .. 0.87
   2 ?    0.3   0.0      0.25   3.3e+02       5      28 ..     399     421 ..     393     444 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.2e-05
                 EEEEESTTSSHHHHHHHHCCSHCCCCCCBTEEE CS
      NB-ARC  23 valvGmgGvGKttlakqilnksdevegrFdsva 55 
                 ++l G +GvGKt+ +++ +n+ ++ +g + ++ 
  KHJ30935.1 181 IGLFGGAGVGKTVFIQELINNIAKAHGGYSVFT 213
                 799******************999999998875 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.25
                 HHHHHHHHHCTTTSCSEEEEEEES CS
      NB-ARC   5 vekviekLlekdelqslvvalvGm 28 
                   kv++ L e ++lq +++a+ Gm
  KHJ30935.1 399 ASKVQQMLQEYKSLQ-DIIAILGM 421
                 567888888877887.78888887 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   0.00036      0.47       9      38 ..     177     206 ..     171     215 .. 0.84
   2 ?    2.6   0.1      0.12   1.5e+02      68     119 ..     350     432 ..     314     444 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00036
      AAA_19   9 kekvllvtaGpGtGKTrvlkhivallvelg 38 
                 + + + + +G+G GKT  +++ ++ + +++
  KHJ30935.1 177 RGGKIGLFGGAGVGKTVFIQELINNIAKAH 206
                 56678899**************99988776 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.12
      AAA_19  68 eatTiHrlal.................................ldfddlltealelleeaeeekklqeee.llivDEfqdvdelqy 119
                 +atT+ +l                                    d  d+ ++  ++l+e    k lq+   +l  DE ++ d+l +
  KHJ30935.1 350 PATTFAHLDAttvlsrgiselgiypavdplesksrmldpriigQDHYDTASKVQQMLQE---YKSLQDIIaILGMDELSEADKLTV 432
                 37787777557888888888888888888888888888888774444444455666664...556666666999*****9997765 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   6.2e-05      0.08       3      69 ..     164     231 ..     162     265 .. 0.86
   2 ?   -1.3   0.0      0.85   1.1e+03      35      74 ..     442     480 ..     440     484 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6.2e-05
      ATPase   3 tgIeglDeilkgGipegrvvlitGepGtGKtifalqFlikgaekygepgvfvtveepa...edlrenaks 69 
                 tgI+  D +    + +g  + + G++G GKt+f ++ + + a+  g   vf  v e+    +dl++++++
  KHJ30935.1 164 TGIKVVDLLA--PYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGERTregNDLYHEMQE 231
                 7888888775..788999999**********************************999777888888875 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.85
      ATPase  35 falqFlikgaekygepgvfvtveepaedlrenakslGwdl 74 
                 +++ F++ ++ + g +gv+v +  + ++++  ++  G dl
  KHJ30935.1 442 LSQPFAVAQVFT-GIEGVLVDLKDTIRSFKAIMNGEGDDL 480
                 78999****888.*******99999999998888877776 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   5.7e-05     0.073      25     136 ..     183     295 ..     178     312 .. 0.65
   2 ?   -2.0   0.0       2.1   2.7e+03     105     141 ..     401     438 ..     389     460 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.7e-05
    ATPase_2  25 iYGpegsGKtaLlkeiienl.edkdkyviyyialreesiskldefieeeeekkklekalgiavpkaeleeilk...eksklvfkaielllekikkkgkk 119
                 ++G  g+GKt +++e+i+n  + ++ y ++    ++ ++ +      e +e + ++    ++v  + + ++ +    + + +   ++ +     ++g+ 
  KHJ30935.1 183 LFGGAGVGKTVFIQELINNIaKAHGGYSVFTGVGERTREGNDLYH--EMQETRVIQLDGESKVALVFG-QMNEppgARARVALTGLTIAEYFRDEEGQD 278
                 6999****************6777779999887777666553333..334444444333334443333.222223344455555555555666677777 PP

    ATPase_2 120 iiiiiDelqklidlgln 136
                 + ++iD +++  + g++
  KHJ30935.1 279 VLLFIDNIFRFTQAGSE 295
                 99999999988866655 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 2.1
    ATPase_2 105 aielllekikkkgkkiiii.iDelqklidlglngaell 141
                 +++++l++ k  +  i+i+ +Del ++ +l++++a++l
  KHJ30935.1 401 KVQQMLQEYKSLQDIIAILgMDELSEADKLTVERARKL 438
                 55555555555554454444788888888877776665 PP

>> RnfC_N  RnfC Barrel sandwich hybrid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   9.1e-05      0.12      22      82 ..      66     128 ..      43     138 .. 0.84
   2 ?   -1.5   0.0         2   2.5e+03      61      87 ..     316     342 ..     309     346 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 9.1e-05
      RnfC_N  22 eklplpkelvlplsqhiGapakplvkvg..dkVlkGqkiaeaegfvsapvhasvsGtVkaiek 82 
                 e+ +  ++l+l ++qh G++    ++ +  +   +G +++++++ +s+pv + + G++++++ 
  KHJ30935.1  66 ETKNGDQKLILEVAQHLGENVVRTIAMDgtEGLVRGHRVTDTGSPISVPVGSGTLGRIMNVTG 128
                 56667899***********987665543227799**********99************99975 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 2
      RnfC_N  61 aegfvsapvhasvsGtVkaiekrlvah 87 
                   g+++  +   + G +++++ + v+ 
  KHJ30935.1 316 DMGLMQERITTTTKGSITSVQAVYVPA 342
                 557788899999999999999988875 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0    0.0001      0.13       6      28 ..     184     206 ..     181     252 .. 0.85
   2 ?   -3.1   0.0         5   6.4e+03      62      75 ..     420     433 ..     399     453 .. 0.51

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.0001
                 EC-TTTCHHHHHHHHHHHHCTS- CS
       NACHT   6 qGeaGsGKTtLlqklalawaegk 28 
                  G aG+GKT+++q+l+  +a+ +
  KHJ30935.1 184 FGGAGVGKTVFIQELINNIAKAH 206
                 699*****************988 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 5
                 CTS--SSS-CCHHH CS
       NACHT  62 lpepaapvsevwav 75 
                 + ++ ++ ++  ++
  KHJ30935.1 420 GMDELSEADKLTVE 433
                 33333333332222 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00014      0.18       3      26 ..     183     206 ..     181     240 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00014
  RNA_helicase   3 lyGpsgeGKStlakeLakallkkl 26 
                   l+G +g+GK+++++eL+++++k+ 
    KHJ30935.1 183 LFGGAGVGKTVFIQELINNIAKAH 206
                   89*******************776 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00026      0.33      27      63 ..     181     219 ..     167     314 .. 0.55

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00026
      AAA_16  27 vllsGesGvGKsslvrellralekdggif..lrgkcdql 63 
                 + l G +GvGK+  ++el + + k++g +  ++g  ++ 
  KHJ30935.1 181 IGLFGGAGVGKTVFIQELINNIAKAHGGYsvFTGVGERT 219
                 557899***************999964443444444444 PP

>> DUF4618  Domain of unknown function (DUF4618)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00015      0.19      17      63 ..     378     425 ..     372     443 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00015
     DUF4618  17 eLtklnkeLvkeIqdted.stakkvrklLqqyeklktvisileksskk 63 
                  L+++++ L   I+  ++  ta kv+++Lq y+ l+++i+il   + +
  KHJ30935.1 378 PLESKSRMLDPRIIGQDHyDTASKVQQMLQEYKSLQDIIAILGMDELS 425
                 68888899999999888647********************99766544 PP

>> T3SS_ATPase_C  T3SS EscN ATPase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.8   0.00049      0.63       3      28 ..     393     418 ..     391     453 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00049
  T3SS_ATPase_C   3 pehlqaarklrellatyqenedLini 28 
                    ++h++ a+k+ ++l+ y++ +d+i i
     KHJ30935.1 393 QDHYDTASKVQQMLQEYKSLQDIIAI 418
                    78**********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.55u 0.30s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 3617.32
//
Query:       KHJ30936.1  [L=527]
Description: putative sexual development activator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-55  186.8   0.1    9.7e-35  120.7   0.0    3.0  3  Velvet    Velvet factor


Domain annotation for each model (and alignments):
>> Velvet  Velvet factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.0   1.5e-21   2.7e-17       1      64 [.      22      88 ..      22      99 .. 0.91
   2 !  120.7   0.0   5.4e-39   9.7e-35     131     249 ..      92     220 ..      85     222 .. 0.93
   3 ?   -0.6   0.1     0.056     1e+03     130     168 ..     240     279 ..     220     350 .. 0.69

  Alignments for each domain:
  == domain 1  score: 63.5 bits;  conditional E-value: 1.5e-21
                EEEEEEE---EEE---SS-S...-----BS--EEEEEEEETTT-SB--GGG---TTEEEEEEEEETT CS
      Velvet  1 ysLevvQqPkrARmCgfgdk...drrpidPppvvqLrvtdaetnsevdveeldssffvvtvdLwsed 64
                y L v+QqP+rAR+Cg g k   drrp+dPppvv+L +++++  +++d++ ++ ++f+++++L ++ 
  KHJ30936.1 22 YVLSVIQQPERARACGSGAKsssDRRPVDPPPVVELKIYNEDGSKSEDITFAYEANFFLYASLETAR 88
                789*************************************9888888****************9865 PP

  == domain 2  score: 120.7 bits;  conditional E-value: 5.4e-39
                 -------------EESEEE--EEE-EEEE-TT--EEEEEE---EEESS-EEEEEEEEEEE-B-S............--B--S..SEEEEEEEEE---EE CS
      Velvet 131 tlssssnqasskltrnLiGslvasafrlkdpedkpgifFvfqDLSVRteGtFrLrfrlvnvgae............avaveekegsapvlaevfSdpFt 217
                 +    ++++ s+++++L+G+ v++ ++l++p+  ++ +F+f+DLSVR+eG++ L+f+l++ +++             ++++++e+s +++ ev S pFt
  KHJ30936.1  92 RGGKAQQTPISAPVPILTGMPVSGTAYLDRPS--EAGYFIFPDLSVRHEGQYILNFNLYEESKNeqdqdfdqthlaPQEPNSTESSYDWRLEVKSIPFT 188
                 4555667778999*****************96..9****************************************99999******************* PP

                 EE-TTT--------HHHHHHHHTT----XXXX CS
      Velvet 218 VysakkFpGvlesTaLskalakqGikipiRkd 249
                 VysakkFpG+ esT+Lsk +a+qG++++iR+d
  KHJ30936.1 189 VYSAKKFPGLSESTDLSKIVAEQGCRVRIRRD 220
                 *****************************986 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.056
                 --------------EESEEE--.EEE-EEEE-TT--EEEE CS
      Velvet 130 atlssssnqasskltrnLiGsl.vasafrlkdpedkpgif 168
                  + +++  + ++++ ++L+Gs   +s f l+d++++ g+f
  KHJ30936.1 240 VRCQEEDVSRERTRSESLSGSSdNSSKFSLTDTSNHLGLF 279
                 3333344444555566677766445555566666665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (527 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3729.67
//
Query:       KHJ30937.1  [L=121]
Description: hypothetical protein EV44_g4257 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-07   31.0   0.0    3.2e-07   30.6   0.0    1.2  1  RNase_H   RNase H
  ------ inclusion threshold ------
       0.02   14.7   0.0      0.046   13.5   0.0    1.6  2  RVT_3     Reverse transcriptase-like


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0   3.6e-11   3.2e-07      46     142 ..       3     101 ..       1     102 [. 0.70

  Alignments for each domain:
  == domain 1  score: 30.6 bits;  conditional E-value: 3.6e-11
                 HHHHHHHHHHHTT.SC......SEEEEEES-HHHHHHHHC.CCHHHHHTTSSSETTSSBHTTHHHHHHHHHCHCSSEEEEEE-SCCSSSTHHHHHHHHH CS
     RNase_H  46 aELsAvieaLkalksd......ekvniytDSkYvvkgitq.wvhrwkknawkttseqkpvknkdlaellkelakkkkvqlkwvkgHaGvpkgNemaDrl 137
                 aE++A+ e ++a  ++       ++ +++D k +v+ i +  +  +  +a+  +  q  + +  l  +   ++++ +v  +wv+gH+++  gN +aDrl
  KHJ30937.1   3 AEITAIAEGIEATIRNspihfaRNLIVFSDNKTAVN-IFDgRIPLT-SQAQALKILQ--LQKDWLSRRRLPHVAQGTVVGEWVPGHSNN-LGNDEADRL 96 
                 89********9653333566667888*****99999.555144433.3333344444..33334445555677799*************.6******** PP

                 HHHHH CS
     RNase_H 138 Akeaa 142
                 Ak+++
  KHJ30937.1  97 AKHGS 101
                 **987 PP

>> RVT_3  Reverse transcriptase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   5.2e-06     0.046      42      89 ..       2      52 ..       1      72 [. 0.77
   2 ?   -1.8   0.0      0.29   2.6e+03     113     123 ..      89      99 ..      83     100 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 5.2e-06
       RVT_3 42 eAElqALlrGLqlalk....lgirrlvvegDsktvvqllngrekvksselan 89
                 AE +A+ +G++++ +    +  r+l+v +D+kt v+   gr ++ +s++++
  KHJ30937.1  2 NAEITAIAEGIEATIRnspiHFARNLIVFSDNKTAVNIFDGRIPL-TSQAQA 52
                69***********98734446799******************994.444433 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.29
       RVT_3 113 qNrvAdalAkr 123
                 +N  Ad lAk+
  KHJ30937.1  89 GNDEADRLAKH 99 
                 79999***998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       314  (0.0175135); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 937.85
//
Query:       KHJ30938.1  [L=567]
Description: putative t-complex protein 1 subunit alpha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   4.1e-153  510.5  16.1   4.7e-153  510.4  16.1    1.0  1  Cpn60_TCP1  TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  510.4  16.1  2.6e-157  4.7e-153       1     489 [.      37     554 ..      37     556 .. 0.97

  Alignments for each domain:
  == domain 1  score: 510.4 bits;  conditional E-value: 2.6e-157
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHHHHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPaakllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegyekale 99 
                 + ++vk+++GP+G+dKm v+++g+v+vTnDGatil+ l+iehPa k+lv++a++qd+evGDGTt+vvi+a+eLl+++ +l+++ +hpttii gy+ al 
  KHJ30938.1  37 IYNVVKSSFGPSGLDKMMVDDIGDVTVTNDGATILSLLDIEHPAGKILVDLAQQQDKEVGDGTTSVVIIAAELLRRGTELMKNRIHPTTIITGYRLALR 135
                 6799*********************************************************************************************** PP

                 HHHHHHHHHXEEBXSCSTT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHHHCHCCCS....EECSCCCEECCCCEECECTTSEEESEEEESS--SSTT CS
  Cpn60_TCP1 100 kaleaLkeiaveisseekdreeLlkvartslsskltskeaeelsklvvdAvklieene....keldlgrikvvkieggsledselveGlvldkgvlspd 194
                 +a++++ e+ ++i++++ +re+L+++a+ts+ssk++ ++++++s++vvdA++++++++     ++ ++ ++++k +g+  ++s lv+G++++++v+s+ 
  KHJ30938.1 136 EAVKYMHEN-ISIKIDNLSRESLVNIAKTSMSSKVIGSDSDFFSDIVVDAIQAVKSTNnrqeIKYPVKAVNILKAHGKGCRESILVKGYAINCTVASQA 233
                 ******666.69999999*********************************999988888776778899****************************** PP

                 SSCEEECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECEEEESS-B-HHHHHHHHHCT-EEE-S--HHHHHHHHHHH CS
  Cpn60_TCP1 195 mpkklenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnvvvcqkgiddlalhflakngilalrrvkkkdlerlakat 293
                 m++++++ak+++ld+ L+ e+ +  + ++++d+++le+++k+e  ++ ++++ i ksg+nv++++kgiddl+l+ + ++g +a+rr+kk+dl+r+akat
  KHJ30938.1 234 MKTRVTDAKIAILDMNLQKERMKLGVHITVNDPQKLEEIRKREAGIVMDRVKMILKSGANVIFTTKGIDDLVLKQFIEEGAMAVRRCKKEDLRRIAKAT 332
                 *************************************************************************************************** PP

                 T--EBSCGGGGGCGC......-EEEEEEEECCETTCCEEEEECESSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHH CS
  Cpn60_TCP1 294 Gatavssledltpee......lGtakkveeekigsekttiieevksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakk 386
                 Gat++ssl+dl+ +e      lG+a++v +e+i+++++++i+++k +++a+i+lrg++d+ lde+er+i+d+l++v++++e++ +vpGGGa+e++l  +
  KHJ30938.1 333 GATLISSLSDLNGDEkfessaLGHAEEVVQERISDDECILIKGTKAHSSASIILRGPNDYQLDEMERSIHDSLCAVRRTLESGSIVPGGGAVETALHIY 431
                 ********7777666666677****************************************************************************** PP

                 HHCCCCTSXCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHHHHHHH....................HTTXTTEEEETTTTCEEECCCCTXEEEHHH CS
  Cpn60_TCP1 387 lkeyaksvsgeeqlaieafakALevipktLaeNaGldpievlaklraah....................nkgekelgidvesgeiidlveagvvDplkv 465
                 l+e+a +v ++eqlai  fa+AL++ipktLa Na ld+ e++a+lr++h                     k+ k++g+d+++g+++d ++ gv++p   
  KHJ30938.1 432 LEEFAGTVGSREQLAIGEFAQALLSIPKTLAVNAALDASELIAQLRSRHalsqriqegeanedekniakRKNFKNYGLDLTNGKVVDEIKIGVLEPSMS 530
                 *******************************************************9999988888887766669************************* PP

                 HHHHHHHHHHHHHHHHCEEEEEXX CS
  Cpn60_TCP1 466 krqalksAteaastiLrideiika 489
                 k + lksA+ea   i+rid +ik 
  KHJ30938.1 531 KIKQLKSAVEACIAIMRIDTMIKL 554
                 **********************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (567 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 4379.78
//
Query:       KHJ30939.1  [L=560]
Description: putative prolyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-21   76.1   0.1    3.9e-21   75.0   0.1    1.6  1  ProRS-C_1       Prolyl-tRNA synthetase, C-terminal
    2.9e-21   76.2   0.0    4.9e-21   75.5   0.0    1.3  1  tRNA-synt_2b    tRNA synthetase class II core domain (G, H, P
    5.3e-17   61.8   0.0    1.4e-16   60.4   0.0    1.8  1  HGTP_anticodon  Anticodon binding domain


Domain annotation for each model (and alignments):
>> ProRS-C_1  Prolyl-tRNA synthetase, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.0   0.1   6.5e-25   3.9e-21       1      69 []     470     560 .]     470     560 .] 0.97

  Alignments for each domain:
  == domain 1  score: 75.0 bits;  conditional E-value: 6.5e-25
                 HHHHHHHHHTT-EEEEEESSGHHHHHHHHHHH..................S-EEEEEESSB..-SSCCCSB-T..TT-SB-SEEEEEE-B- CS
   ProRS-C_1   1 weefkealekkgfvlapWcgeeecEekIkeet..................gakslcipfdq..epseegtkCi..vcgkpakkwvlfgrsY 69 
                 w+++ +al++k++vl+p+c +e+cE+k+ke t                  g+kslcipf+q      ++tkC+   c+  a+kw++fgrsY
  KHJ30939.1 470 WDKVIPALDSKNVVLIPHCLQEKCEDKVKELTtgspdsfegpaelktpsmGMKSLCIPFKQpvGLISGETKCLnpECDALAEKWCMFGRSY 560
                 99**********************************************************9876668******99**************** PP

>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.5   0.0   8.2e-25   4.9e-21      11     176 ..     152     324 ..     142     327 .. 0.87

  Alignments for each domain:
  == domain 1  score: 75.5 bits;  conditional E-value: 8.2e-25
                   EEE-SSSHHHHHHHHHHHEEEB.GGSSEEEEEEEEEEBTTTSTBCTTTB-SEEEEEEEEEEES.GGGHHHHHHHHHHHHHHHHHHTT.SCEEEEEE. CS
                   xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
  tRNA-synt_2b  11 yiLkPtneetfvelirdevlrs.krLPlklyqiqtkyRdEksdsrGLlRvreFhqkdgyvfha.easlddslrdlikaisriferlglefraiiel. 104
                    +++Pt+e  ++  ++++ +rs ++LP++l q  ++ R E++++ + lR reF +++g+  h+ e+ + d++ +++++++ri+e+l+  + ++++  
    KHJ30939.1 152 VAVRPTSEVVMYPYFSKW-IRShRDLPFRLNQWNSVVRWETKQTTPFLRTREFLWQEGHTAHLtEELAGDEVLQILELYARIYEELL-AVPVVRGRk 246
                   589*************99.***555*****************888******************899999****************98.556777775 PP

                   .GTTSCBTTSEEEEEEEEETTTSEEEEEEEEEEEETHHHHHTTEEEEC....TTSSEEEEEEEEEEEE.HHHHHHHHH CS
                   .xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxx.xxxxxxxxx RF
  tRNA-synt_2b 105 .msaksadykdkkefeavsesltkgieigtiqklgtrlserlgatvld....ennreksvimicaaig.veRllsail 176
                     ++k a +++++ +e + +s ++gi+ +t + lg+++s+ +++tv d      +++k+v++ + + g  +R++++++
    KHJ30939.1 247 tEKEKFAGGYYTTTVEGYIPSNGRGIQGATSHCLGQNFSKMFDITVEDpaskTSDKVKHVHVWQNSWGlSTRTIGVMV 324
                   33334478999*********************************8876222255689*********99779**99987 PP

>> HGTP_anticodon  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.4   0.0   2.3e-20   1.4e-16       1      91 [.     343     441 ..     343     444 .. 0.96

  Alignments for each domain:
  == domain 1  score: 60.4 bits;  conditional E-value: 2.3e-20
                     SEEEEESSSS.......HHHHHHHHHHHHHHHHTTTSEEEEES.SSSTHHHHHHHHHHTT-SEEEEE-HHHHHHTEEEEEETTTCEEEEEETTHH CS
  HGTP_anticodon   1 qvvviplnek.......aeeleeyakklaeeLraagirveldd.snesigkkireadllgipfavvvGekelekgtvtvrdrdtreqervsldel 87 
                     qv++ip++ +       ++++ ++ + l++ L a gir+e+d  +++++ +k+++++l+g+p++++ G+k++ k +v+  +rdt+e+ ++++ +l
      KHJ30939.1 343 QVIIIPVGINksttpeaKNKHYDELQALKNTLVATGIRTEYDIrDGYTPAWKFNDWELKGVPLRLEYGPKDAAKSIVSFARRDTGEKGTLPIIDL 437
                     8************999988899*********************************************************************9998 PP

                     HHHH CS
  HGTP_anticodon  88 vekl 91 
                      + +
      KHJ30939.1 438 GKNV 441
                     7765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (560 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 4449.52
//
Query:       KHJ30940.1  [L=232]
Description: putative ubiquinol-cytochrome c reductase iron-sulfur subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-11   43.3   0.0    4.5e-11   42.5   0.0    1.4  1  Rieske    Rieske [2Fe-2S] domain
    1.5e-09   38.2   1.8    4.4e-09   36.7   1.8    1.8  1  UCR_TM    Ubiquinol cytochrome reductase transmembrane region
  ------ inclusion threshold ------
      0.026   14.6   0.0      0.037   14.1   0.0    1.2  1  SUKH-4    SUKH-4 immunity protein


Domain annotation for each model (and alignments):
>> Rieske  Rieske [2Fe-2S] domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   7.5e-15   4.5e-11      33      87 ..     165     218 ..     111     221 .. 0.77

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 7.5e-15
                 TS-EEEEESC-TTTT-BCGGSEEETT.EEE-TTT--EEETTSBEEE-TTHHHEEE CS
      Rieske  33 dgevyAlsdvCtHrgaplsegkidekgvleCpcHgwaydadGkvikgPaprplat 87 
                 + e+ ++ +vCtH+g+ + ++++d +    CpcHg+ yd +G+++kgPap +l+ 
  KHJ30940.1 165 KPEWLVMLGVCTHLGCVPIGEAGDYG-GWFCPCHGSHYDISGRIRKGPAPMNLEV 218
                 67888*************99777545.677********************99865 PP

>> UCR_TM  Ubiquinol cytochrome reductase transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   1.8   7.4e-13   4.4e-09       6      66 .]      53     103 ..      50     103 .. 0.91

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 7.4e-13
      UCR_TM   6 vPdfsdyrresvkDpskssretedeRkaftylvlaggavvgayaaKsvVqkfvssmsASAD 66 
                 +Pdfs+y+ +s  +++           +f+y+++++ ++++a +aK++Vq+f+  msASAD
  KHJ30940.1  53 IPDFSKYKSSSGPNSNL----------VFQYFMVGTMGALTAAGAKATVQDFLVNMSASAD 103
                 79999999998655555..........*********************************9 PP

>> SUKH-4  SUKH-4 immunity protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   6.1e-06     0.037       6      82 ..      95     175 ..      83     191 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 6.1e-06
      SUKH-4   6 LeelfGpggvvrlpaeavaawllpeparrfLvevGlPd...lqllae.eeeaavadlelvaaerseelpaeaggllvLGal 82 
                 L ++ ++ +v+ ++  +v+ + +pe    ++ + G P+   + ++ae ee+++v++ +l+++++ e+ + +++ l+ LG +
  KHJ30940.1  95 LVNMSASADVLAMAKVEVDLAAIPEGKNVLIKWRGKPVfirHRTPAEiEEAKSVDWEKLRDPQKDEDRALKPEWLVMLGVC 175
                 556667779999*******************************************************************88 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1747.70
//
Query:       KHJ30941.1  [L=429]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.07   13.6   0.8        1.6    9.2   0.0    2.4  2  DUF1687   Protein of unknown function (DUF1687)
        1.9    8.4   7.8        1.1    9.2   0.6    2.7  2  DUF35_N   Rubredoxin-like zinc ribbon domain (DUF35_N)


Domain annotation for each model (and alignments):
>> DUF1687  Protein of unknown function (DUF1687)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.2     0.023   2.1e+02       6      41 ..     119     154 ..     116     174 .. 0.80
   2 ?    9.2   0.0   0.00017       1.6      54     105 ..     356     406 ..     324     416 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.023
     DUF1687   6 kspdvitlFhnakspaSnkllklLkkasakasekak 41 
                 k+++ itl +na++ +S k+ k   ++ ++ +++++
  KHJ30941.1 119 KKKARITLSTNASVVSSRKVTKSFTSKDKSPTRDSS 154
                 67789****************999888777655544 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00017
     DUF1687  54 tekfPTlDQlktilsyvgkskaksvlksafpelseilkkfkkdeeskkklke 105
                  +++PT +Qlkt  +  g+ ++++vl+++ +e+  +  + +++e ++++ +e
  KHJ30941.1 356 RSGAPTKEQLKTYRQ-AGEREYQAVLRAKAAEELAASTNTNNTELASNQASE 406
                 6789********999.777778999999886666665555555444444433 PP

>> DUF35_N  Rubredoxin-like zinc ribbon domain (DUF35_N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.6   0.00012       1.1      22      36 ..     311     325 ..     310     326 .. 0.81
   2 ?    2.0   1.5     0.022     2e+02      11      19 ..     333     341 ..     332     353 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00012
     DUF35_N  22 fPPravCphCgsddl 36 
                 +P+ ++C +C+s++ 
  KHJ30941.1 311 YPRAPSCGNCWSTNH 325
                 5555********985 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.022
     DUF35_N  11 gqrCpdCGt 19 
                 +++C++CG 
  KHJ30941.1 333 ATKCRNCGG 341
                 689999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       775  (0.0432261); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 3223.84
//
Query:       KHJ30942.1  [L=640]
Description: putative apses transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00027   20.8   3.4     0.0044   16.9   0.0    3.3  2  KilA-N    KilA-N domain
  ------ inclusion threshold ------
        1.8    8.9   6.6        4.5    7.7   6.6    1.6  1  DUF5383   Family of unknown function (DUF5383)
        8.7    5.0   7.7         15    4.3   7.7    1.3  1  ALMT      Aluminium activated malate transporter


Domain annotation for each model (and alignments):
>> KilA-N  KilA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   7.3e-07    0.0044       8     105 ..     149     226 ..     141     232 .. 0.78
   2 ?   -2.1   2.4      0.56   3.4e+03      65      87 ..     422     444 ..     400     487 .. 0.64

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 7.3e-07
      KilA-N   8 iiirrvkdgyinatkllkaa.aedtkriddWlrnkstkelleeleedynisekkksektisenrkakpgrlqGtYvhpdlalava.sW.isp.efalkv 102
                  + rr+++ +in tkll+ a +++ +r d +l++++ ++++++  ++                       l+G++++ d al++a +  i++  ++l+v
  KHJ30942.1 149 CVARREDNHMINGTKLLNVAgMTRGRR-DGILKSEKHRHVVKIGPMH-----------------------LKGVWIPFDRALEMAnKEkITDiLYPLFV 223
                 3458888*************7666666.*************999976.......................67888888888888876678887888877 PP

      KilA-N 103 skl 105
                  ++
  KHJ30942.1 224 QDI 226
                 776 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.56
      KilA-N  65 tisenrkakpgrlqGtYvhpdla 87 
                 t s+n ++ + + + tY   +l+
  KHJ30942.1 422 TSSHNTSNSNSNSNNTYLKNELV 444
                 44455556666666666666555 PP

>> DUF5383  Family of unknown function (DUF5383)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   6.6   0.00076       4.5      44      99 ..     433     487 ..     409     494 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00076
     DUF5383  44 keeaeelkesLfassekesntiaakakelgLfseekesvkqsateqeseeksnlLp 99 
                 + ++  lk++L +ss+    t +   +  +L+s+ ++s +qs +e+e+ e+ n+L 
  KHJ30942.1 433 NSNNTYLKNELVSSSSRALHTESESHEAKNLSSTHNQSHQQSTNEEEK-EQENELE 487
                 456778999*******999****************************9.8888876 PP

>> ALMT  Aluminium activated malate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   7.7    0.0025        15     312     387 ..     411     490 ..     397     559 .. 0.56

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0025
        ALMT 312 elaesvkkmkklskveellkevkvaaeeLqskldskskLlvnsekweaakkkekaeeveekkeeekeseskkeea....e 387
                 +  ++v+++   s+ + + ++ ++    L+++l s+s   +++e+++++ k+ ++ ++++++++++e+e+++e++    +
  KHJ30942.1 411 SHDQQVNNRYSTSSHNTSNSNSNSNNTYLKNELVSSSSRALHTESESHEAKNLSSTHNQSHQQSTNEEEKEQENEleytH 490
                 45567777777777777778888888888888855555445444433333333333333322222222222222232320 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (640 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1996  (0.111328); expected 358.6 (0.02)
Passed bias filter:                      653  (0.0364214); expected 358.6 (0.02)
Passed Vit filter:                        90  (0.0050198); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.85u 0.35s 00:00:01.20 Elapsed: 00:00:00.47
# Mc/sec: 4115.11
//
Query:       KHJ30943.1  [L=310]
Description: putative peroxisomal -dienoyl- reductase sps19 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.6e-38  130.2   1.0    1.2e-37  129.7   1.0    1.2  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
    1.8e-27   96.1   0.9    2.4e-27   95.7   0.9    1.1  1  adh_short     short chain dehydrogenase
    4.6e-07   29.9   0.9      2e-06   27.9   0.1    1.9  2  KR            KR domain


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.7   1.0     2e-41   1.2e-37      10     232 ..      36     277 ..      27     278 .. 0.85

  Alignments for each domain:
  == domain 1  score: 129.7 bits;  conditional E-value: 2e-41
                   HHHHHHHTT-EEEEEESSGGH.HHHHHHHHHHTTSE.E...EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHHHHHHHH CS
  adh_short_C2  10 iAkalaeeGaevvltdlneea.kkrveelaeelgae.v...lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsreefdraldv 101
                    ++al   Ga+ ++  +n ++ ++ ++++a+  +++ v     +DV++ e+++++v+++v+++g +D+++  a+      +p+ ++s ++f++++d+
    KHJ30943.1  36 QVRALVYLGANACIIGRNVSKtEQMAASIAKVRNSSkVigiGGIDVRKIEDLDKAVARCVQELGAIDFVIAGAAGNFI--APISDLSSNGFRTVIDI 130
                   57888899999999999999955555555554444355576899**************************88877777..***************** PP

                   HTHHHHHHHHHHHH.HCTSC.............CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BH.CTGGGGST CS
  adh_short_C2 102 nlyslfllakaalp.lmkeg.............gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpik.Tlaasgik 183
                   ++ + ++++ka lp l+++              g+i+ +s +    ++p +++ ++aKa++ al+ ++A elgp+gi+ N +spgpi  T+ ++++ 
    KHJ30943.1 131 DTIGSYNTLKATLPhLITSAernpnngtnsstgGRIIFISATFHFTGMPLQTHAAVAKAGVDALSASAAIELGPRGITSNIISPGPIIgTEGMKRLG 227
                   **************84432234577889999999***************************************************986155566666 PP

                   T.HHHHHHHHHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTT CS
  adh_short_C2 184 g.fdelleelearaplgrlgtpeevaeaalfLasdeasyitGqtlvvDgG 232
                   + + e    + ++ pl+r gt++eva+a++fL+sd+ ++++G++lvvDgG
    KHJ30943.1 228 DrKMEANGDAFKKVPLQRYGTVKEVADATIFLFSDAGNFVNGAVLVVDGG 277
                   533345556779*************************************9 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.7   0.9     4e-31   2.4e-27       1     189 [.      21     225 ..      21     230 .. 0.95

  Alignments for each domain:
  == domain 1  score: 95.7 bits;  conditional E-value: 4e-31
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT..TSEEEEEE.-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGC CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee..gakalaiq.vDvtdreevealvekavkklgkldvLvnNAGitgsgpfsel 96 
                 kvv+ tG+++ I    +++l+  Ga+  +++r+ +k e++a+++ +   ++k++ i  +Dv++ e+++++v+++v++lg +d ++++A+ +  +p+s+l
  KHJ30943.1  21 KVVFCTGGAGTICSVQVRALVYLGANACIIGRNVSKTEQMAASIAKVrnSSKVIGIGgIDVRKIEDLDKAVARCVQELGAIDFVIAGAAGNFIAPISDL 119
                 89******************************************999887788877527**************************************** PP

                 SHHHHHHHHHHHTHHHHHHHHHHHHHHH............HCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS CS
   adh_short  97 seeewervievNltgvflltravlpaml............kqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvd 183
                 s++ ++ vi++   g +++ +a lp+++            ++ +GrI+++s +  + +++ ++  + +Ka+v++l+ s+a el p+gi+ n++ PG++ 
  KHJ30943.1 120 SSNGFRTVIDIDTIGSYNTLKATLPHLItsaernpnngtnSSTGGRIIFISATFHFTGMPLQTHAAVAKAGVDALSASAAIELGPRGITSNIISPGPII 218
                 ************************************9999999*****************************************************997 PP

                 .SHHHHH CS
   adh_short 184 .Tdmake 189
                  T+ +k+
  KHJ30943.1 219 gTEGMKR 225
                 7887665 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.1   3.3e-10     2e-06       4     110 ..      24     129 ..      22     149 .. 0.91
   2 ?    0.4   0.1     0.088   5.3e+02     131     161 ..     166     196 ..     155     205 .. 0.87

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 3.3e-10
                 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT--H CS
          KR   4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleemta 102
                 + tGG+G ++ + +r l+  ga+   +++R+ +++e+++a ia+++++   + +  +Dv + +++ ++++++ +e ++i  vi  A     ++++++++
  KHJ30943.1  24 FCTGGAGTICSVQVRALVYLGANAC-IIGRNVSKTEQMAASIAKVRNSSKVIGIGGIDVRKIEDLDKAVARCVQELGAIDFVIAGAAGNFIAPISDLSS 121
                 579******************9875.67**********************************************************9999999999999 PP

                 HHHHHHHT CS
          KR 103 edleqvla 110
                 + +++v+ 
  KHJ30943.1 122 NGFRTVID 129
                 99999986 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.088
                 EEEEEEHHHHH--TT-HHHHHHHHHHHHHHH CS
          KR 131 fvlfSSiagllgsagqanYaaaNaflDalae 161
                 ++++S    ++g++ q++ a a a +Dal +
  KHJ30943.1 166 IIFISATFHFTGMPLQTHAAVAKAGVDALSA 196
                 56778888899*****************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2222.19
//
Query:       KHJ30944.1  [L=810]
Description: hypothetical protein EV44_g3099 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (810 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1325  (0.0739026); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 5583.60
//
Query:       KHJ30945.1  [L=270]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      6e-11   42.4   5.9    8.1e-10   38.8   3.2    2.3  2  Mpv17_PMP22  Mpv17 / PMP22 family


Domain annotation for each model (and alignments):
>> Mpv17_PMP22  Mpv17 / PMP22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.1    0.0003       5.4      12      40 ..     143     185 ..     141     185 .. 0.91
   2 !   38.8   3.2   4.5e-14   8.1e-10       6      61 ..     179     234 ..     173     235 .. 0.95

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0003
  Mpv17_PMP22  12 keelkekfwptlkanwkvWpp..............aqlinFyf 40 
                  k++lk+kf++++ +n+ v p+              aq+in ++
   KHJ30945.1 143 KTTLKAKFLQIIASNLIVAPIqnsvylismaiiagAQTINQVY 185
                  579******************9999999999999999999876 PP

  == domain 2  score: 38.8 bits;  conditional E-value: 4.5e-14
  Mpv17_PMP22   6 ksleeikeelkekfwptlkanwkvWppaqlinFyfvPlkfRvlfvnvvslgWntyL 61 
                  +++ ++ +++k+ f+p++k++w+  p+a ++   f+P + +v+f+n+++++ +ty 
   KHJ30945.1 179 QTINQVYATWKAGFMPVMKVSWVSSPIALAFAQQFLPEQAWVPFFNIIGFFIGTYV 234
                  7899**************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       714  (0.0398237); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2075.44
//
Query:       KHJ30946.1  [L=509]
Description: putative low affinity iron transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.8e-48  162.2  10.8    1.4e-15   57.2   0.0    4.2  4  Iron_permease  Low affinity iron permease
  ------ inclusion threshold ------
      0.065   13.2   0.1        1.6    8.8   0.0    2.5  2  Consortin_C    Consortin C-terminus
        0.2   11.0   0.5        1.3    8.3   0.1    2.5  3  CcmH           Cytochrome C biogenesis protein


Domain annotation for each model (and alignments):
>> Iron_permease  Low affinity iron permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   1.8   4.9e-10   2.9e-06       6      70 ..      72     137 ..      68     155 .. 0.85
   2 !   51.2   0.6   1.6e-17   9.8e-14       8      72 ..     210     274 ..     204     295 .. 0.89
   3 !   29.5   0.0   8.9e-11   5.3e-07       1      82 [.     314     395 ..     314     408 .. 0.92
   4 !   57.2   0.0   2.3e-19   1.4e-15       2      74 ..     418     490 ..     417     503 .. 0.90

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 4.9e-10
  Iron_permease   6 kavarvagseiafvlallvivvwavsgplfkysdtwQLviNtgttiitF.lmvfliqnsqnrdska 70 
                    ++++ +ags+++f+l l ++ vw+  g +++ +d wQ+v   + +i  + + ++li ++qn+  + 
     KHJ30946.1  72 DQITVLAGSSMTFLLMLFLVGVWISFGIVYGITDKWQIVFQNASSIQVYvIDILLIRQQQNASRAL 137
                    689999**********************************99999975515689999999986554 PP

  == domain 2  score: 51.2 bits;  conditional E-value: 1.6e-17
  Iron_permease   8 varvagseiafvlallvivvwavsgplfkysdtwQLviNtgttii.tFlmvfliqnsqnrdskaiq 72 
                    +ar  gs ++f+l  + i +w++ gp+f++sdtwQL iNt t+++ tF  vfl qn q r +++++
     KHJ30946.1 210 MARGLGSMWTFFLYWIGIGAWVAVGPYFQFSDTWQLYINTITALVlTFTSVFL-QNIQQRQEDKLK 274
                    78899****************************************9*****98.788888777766 PP

  == domain 3  score: 29.5 bits;  conditional E-value: 8.9e-11
  Iron_permease   1 fervakavarvagseiafvlallvivvwavsgplfkysdtwQLviNtgttiitFlmvfliqnsqnrdskaiqlkLdeLiras 82 
                    fer+ +  a+++gs + ++l+l ++ +w   gp + ++d+w L+i t t ++ F+  f++ +   r+++ ++ +++ L +a 
     KHJ30946.1 314 FERFNDFSADLMGSGLGVFLSLHFVGLWLYIGPRMRFNDNWWLIIGTFTGLVGFVNGFILRSLYYREETTVKEEFKKLAAAD 395
                    799999******************************************************9999999999998888886665 PP

  == domain 4  score: 57.2 bits;  conditional E-value: 2.3e-19
  Iron_permease   2 ervakavarvagseiafvlallvivvwavsgplfkysdtwQLviNtgttii.tFlmvfliqnsqnrdskaiqlk 74 
                    er++ a+++++g++ a + +++v+v++ + ++++ +s t+QL++Nt+t ii  Fl+++li  ++ ++++   ++
     KHJ30946.1 418 ERITGAISDACGHRYAPFGSIIVVVILLAIATVMRWSVTGQLLCNTPTMIIeGFLLIILINAHNHANDER-DAD 490
                    68999**********************************************99**********9988776.555 PP

>> Consortin_C  Consortin C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   0.00026       1.6      19      72 ..      45      98 ..      39     123 .. 0.71
   2 ?    1.5   0.1     0.048   2.9e+02      55      74 ..     438     458 ..     410     466 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00026
  Consortin_C 19 edelkeeaqsekksskrkvrfkepddtldq.devggdscllllllclvtvvisvG 72
                 +++++++++ + +s+     f++p+  +dq  + +g+s+ +ll+l lv v is G
   KHJ30946.1 45 NEKDEKSTTDQVSSRDELSSFRKPN-IFDQiTVLAGSSMTFLLMLFLVGVWISFG 98
                 3323333333334444455677775.577725668888999999*********98 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.048
  Consortin_C  55 scllllllclvtvv.isvGGt 74 
                    ++++ll ++tv+  sv G 
   KHJ30946.1 438 IIVVVILLAIATVMrWSVTGQ 458
                  3467899******94577775 PP

>> CcmH  Cytochrome C biogenesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.44   2.6e+03      88     117 ..     191     220 ..     188     225 .. 0.79
   2 ?    8.3   0.1   0.00021       1.3      83     133 ..     228     279 ..     225     289 .. 0.82
   3 ?   -2.1   0.0      0.35   2.1e+03      90     136 ..     346     396 ..     339     402 .. 0.51

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.44
                 E---XXXXXXXXXXXXXXXXXXXXXXXXXX CS
        CcmH  88 ykPpvkastllLWlgPllllllgllvllll 117
                 + P+  +s    W   +ll++ gl+ ++++
  KHJ30946.1 191 LPPESMSSISYAWSQTCLLMARGLGSMWTF 220
                 556666677789********9999988875 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00021
                 TTT-EE---XXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        CcmH  83 GdfVlykPpvkas.tllLWlgPllllllgllvlllllrrrkkkkaeeeelsa 133
                 G +V + P ++ s t+ L++  +++l+l ++ ++l+  +++++++ ++ l++
  KHJ30946.1 228 GAWVAVGPYFQFSdTWQLYINTITALVLTFTSVFLQNIQQRQEDKLKRCLEH 279
                 889999999996449*****************99999988877777664444 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.35
                 --XXX.XXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        CcmH  90 Ppvka.stllLWlgPllllll...gllvlllllrrrkkkkaeeeelsaeee 136
                 P+++   +++L +g ++ l++   g+++  l+ r++++ k+e ++l a+++
  KHJ30946.1 346 PRMRFnDNWWLIIGTFTGLVGfvnGFILRSLYYREETTVKEEFKKLAAADR 396
                 555541467777777665554111344444444555544444446666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1103  (0.0615204); expected 358.6 (0.02)
Passed bias filter:                      650  (0.0362541); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.39
# Mc/sec: 3922.95
//
Query:       KHJ30947.1  [L=844]
Description: putative calpain-like protease ory [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.4e-25   87.6   0.0    2.3e-23   82.7   0.0    2.2  1  Peptidase_C2  Calpain family cysteine protease
    7.5e-09   36.0   0.0      0.092   13.0   0.0    3.5  3  Calpain_III   Calpain large subunit, domain III
  ------ inclusion threshold ------
       0.32   11.1   1.5       0.62   10.2   1.5    1.5  1  MIT           MIT (microtubule interacting and transport) dom


Domain annotation for each model (and alignments):
>> Peptidase_C2  Calpain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.7   0.0   3.8e-27   2.3e-23      41     249 ..     183     396 ..     157     426 .. 0.81

  Alignments for each domain:
  == domain 1  score: 82.7 bits;  conditional E-value: 3.8e-27
  Peptidase_C2  41 vdgasrtdikqGelgdCwllaaiasltlke.....kllkrvvpkeqsf...ee.kyaGifhfrfwrfgewvdvvvDDrlPt..vngklvfvksaekn 126
                   ++  + td+ q  + dC ++a++++++++      +l + v+ +++++    + + +G + +r+  +g + +v++D+rlP    n++l  + +++ +
    KHJ30947.1 183 ISTDRATDLVQDIIADCSVVASLCVISSRAskghgQLTASVLYPKHKTlslPKiSKNGKYICRLQFNGCFRKVTIDNRLPKsnLNRSLHVTDRNDPQ 279
                   5567889*******************9865222337899999888754455445889***********************9544566777999999* PP

  Peptidase_C2 127 efWsalleKAyAklhgsyealkggstsealedftggvtesiel.elkeapkelfkilkkalergslmgcsieassaeeleaklengLvkgHaYsvta 222
                   ++W al+eKAy k+ g y+   g ++   l  ++g + e+i l +++ + ++l+  + ka+  g +m +  + +  +e+ ++ e gLv +H Y++++
    KHJ30947.1 280 NIWPALIEKAYLKVRGGYD-FPGSNSGTDLWIISGWIPEQIFLqSDDIQIEQLWYRIFKAFCYGDVMITLGTGKL-TEK-EENELGLVGHHDYAILD 373
                   ******************8.7888999999**********999423334566******99999999998776333.333.44479************ PP

  Peptidase_C2 223 veevelkkekvkLirlrnPWGeveWkG 249
                   ++ev++k    +L+ ++nPW + + +G
    KHJ30947.1 374 MKEVSSK----RLLLIKNPWCDEKLQG 396
                   ****755....999*******998888 PP

>> Calpain_III  Calpain large subunit, domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0   0.00078       4.7      14      79 ..     448     509 ..     446     539 .. 0.59
   2 !   11.2   0.0   5.7e-05      0.34       1      33 [.     583     613 ..     583     630 .. 0.81
   3 !   13.0   0.0   1.5e-05     0.092     104     137 ..     660     693 ..     643     697 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00078
  Calpain_III  14 nkketfwkNPqfrleleeeededeeekkctvlvslmqk........nrrkerkkgeellt.........igfavykveeeeen 79 
                  +++ +f++NPq++++ ++         k++v + l ++                  ++l+         i ++v++   ++ +
   KHJ30947.1 448 KNSGSFIHNPQYTIRSSQ---------KDSVWILLSRHfstdeqniV---------DNLQnkisgavghISLYVFE---SSGQ 509
                  67899*********9866.........57777777775333222110.........22222323333336777777...3333 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 5.7e-05
  Calpain_III   1 geWvkgstAGGcrnkketfwkNPqfrleleeee 33 
                  g+W +  tAGG+      + kNPqf++++++e+
   KHJ30947.1 583 GAW-SLRTAGGNA-SLPYYHKNPQFSISVTSEA 613
                  678.6679***76.6799***********9853 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 1.5e-05
  Calpain_III 104 evvkrfklppGeYvivPstfepneegeFlLrvFs 137
                   +++  ++ +G+Y iv stf+ +++g+F+L   s
   KHJ30947.1 660 ALTSLKNVAAGKYTIVCSTFDVEQTGRFTLHTCS 693
                  5555567899*******************98655 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.5    0.0001      0.62       6      64 ..       5      58 ..       2      59 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.0001
         MIT  6 elvkkA.veeDnagnyeeAlelYkealelLlqalkekneerrellrekieeYleRaeeLk 64
                +lv+k  +  D  +n   A elY +a+e+  ++lk    + ++ l++k++  l++aee+k
  KHJ30947.1  5 NLVSKSlTRDDALKNAIRATELYMSAIEH--TVLK----SEKNRLQNKCRLLLQKAEEIK 58
                56666656678889999***********7..7787....67899**************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (844 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.24s 00:00:00.89 Elapsed: 00:00:00.38
# Mc/sec: 6615.01
//
Query:       KHJ30948.1  [L=330]
Description: putative peroxisomal carrier protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-55  185.0   1.0    1.2e-19   70.1   0.1    3.1  3  Mito_carr  Mitochondrial carrier protein
  ------ inclusion threshold ------
        2.5    7.8   5.8       0.54    9.9   1.4    2.1  2  SPW        SPW repeat


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.1   0.1   1.3e-23   1.2e-19       3      95 ..      10     110 ..       8     112 .. 0.92
   2 !   54.5   0.0   9.1e-19   8.2e-15       4      94 ..     119     205 ..     116     208 .. 0.92
   3 !   58.1   0.0   7.1e-20   6.4e-16       7      93 ..     215     301 ..     210     303 .. 0.94

  Alignments for each domain:
  == domain 1  score: 70.1 bits;  conditional E-value: 1.3e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS........HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa........ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 ++++   ++G++++++a ++++Pld+vKtrlq+q k++ + + ++        ++d++ ki+  +G+ gly G++ +l++va++++++f +y  +++++
  KHJ30948.1  10 IPPWVLAVSGATGAVIANTIVYPLDIVKTRLQVQVKQKPSGTCHNdnqiyyksTWDAILKIIDRNGVCGLYAGINGALIGVASTNFAYFYFYSIVRTFY 108
                 7889999**************************99887776666678899999*******************************************999 PP

                 CT CS
   Mito_carr  94 lk 95 
                 + 
  KHJ30948.1 109 MS 110
                 86 PP

  == domain 2  score: 54.5 bits;  conditional E-value: 9.1e-19
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHH.HHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiyk.eeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                 +++ el +G++aga+a+l+t P+ v+ tr qtq++ + k    +i+d+ k+i++ ++G +gl+rGl ++l+ ++ + a++ ++y+ l++l++
  KHJ30948.1 119 GTITELTMGAVAGAAAQLLTIPVSVITTRQQTQAEGQDK----GIVDTAKEIIEsDDGWTGLWRGLKASLVLTI-NPAITYGAYQRLRQLIF 205
                 56789*******************************887....3*********8579****************9.************99986 PP

  == domain 3  score: 58.1 bits;  conditional E-value: 7.1e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   7 kellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 + +l G++++++at++t+Pl v+K+ lq+++  ++++ ++++++vl+ i+++eG +gl++G++p++l+  + ++l +++ e +  l+
  KHJ30948.1 215 EAFLLGAVSKSLATIATQPLIVAKVGLQSKSLCQRSKPFKSFVEVLHFIIENEGPTGLFKGIGPQVLKGLIVQGLLMMTKERVELLF 301
                 679*****************************************************************************9987666 PP

>> SPW  SPW repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.4     6e-05      0.54      15      33 ..      12      30 ..       9      30 .. 0.94
   2 ?   -2.6   0.2      0.46   4.2e+03      30      41 ..     123     134 ..     120     138 .. 0.62

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 6e-05
         SPW 15 PWvlGfsattgaawnnviv 33
                PWvl +s+ tga++ n iv
  KHJ30948.1 12 PWVLAVSGATGAVIANTIV 30
                ****************997 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.46
         SPW  30 nvivGavvavLa 41 
                  + +Gav+ + a
  KHJ30948.1 123 ELTMGAVAGAAA 134
                 566677766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       552  (0.0307881); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.21s 00:00:00.64 Elapsed: 00:00:00.35
# Mc/sec: 2796.95
//
Query:       KHJ30949.1  [L=926]
Description: putative cyclic nucleotide-binding domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-32  111.9   0.0    1.6e-18   66.5   0.0    2.5  2  cNMP_binding  Cyclic nucleotide-binding domain
    9.2e-22   78.2   0.5    1.5e-21   77.5   0.5    1.3  1  cNMPbd_u2     Unstructured region on cNMP-binding protein
    1.5e-10   40.2   8.5       0.32   11.2   0.0    8.6  8  LRR_6         Leucine Rich repeat
    2.1e-08   34.0   1.5    5.6e-08   32.5   0.1    2.5  3  F-box-like    F-box-like
    1.5e-07   31.1   4.7    1.1e-05   25.2   0.1    4.1  3  F-box         F-box domain
    1.4e-05   24.9   5.9         16    6.5   0.0    8.0  8  LRR_1         Leucine Rich Repeat
    8.4e-05   22.9  21.8        3.7    8.1   0.1    7.3  6  LRR_4         Leucine Rich repeats (2 copies)
     0.0042   16.8   0.4       0.98    9.2   0.0    4.3  4  LRR_8         Leucine rich repeat


Domain annotation for each model (and alignments):
>> cNMP_binding  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.5   0.0   7.1e-22   1.6e-18       4      84 ..      83     160 ..      80     164 .. 0.94
   2 !   43.0   0.0   1.6e-14   3.7e-11       3      87 ..     287     376 ..     285     378 .. 0.83

  Alignments for each domain:
  == domain 1  score: 66.5 bits;  conditional E-value: 7.1e-22
                   E-TT-EEE-TTSB-SEEEEEEES-EEEEEEETTS.EEEEEEE-TTEEESHHHHHHTS--SSEEEESSTEEEEEEEHHHHHH CS
  cNMP_binding   4 fkagevifrqGdpadslyivlsGevrvyrlsedgkevvlavlgpGdlfGelalltgeprtatvvAltdsellalprddfle 84 
                    +a + i+++Gd+a+ +y +++G v+v  +s+dg+  + a+l+pG++fGe+++l + prtat++A+t + ll+l+++d+++
    KHJ30949.1  83 HPAFDHILTEGDEAKAMYWLIRGAVSV--KSRDGEA-TYAELKPGAFFGEIGILMDIPRTATIIARTKCLLLVLKKEDLRA 160
                   567899*********************..9****66.*****************99**********************996 PP

  == domain 2  score: 43.0 bits;  conditional E-value: 1.6e-14
                   EE-TT-EEE-TTSB-SEEEEEEES-EEEEEEETTS......EEEEEEE-TTEEESHHHHH.HTS--SSEEEESSTEEEEEEEHHHHHHHHH CS
  cNMP_binding   3 sfkagevifrqGdpadslyivlsGevrvyrlsedg.....kevvlavlgpGdlfGelall.tgeprtatvvAltdsellalprddflellq 87 
                    +++ + i+ +G  ++++y++++Ge++v   + dg      ++++ +l++G++fGe+  l    +r atv+A+t++e+l+++ + +++l++
    KHJ30949.1 287 IYPPFTDIILKGSVGNEIYFIVRGEAEVI-HEVDGeltkrVSHIFPRLKKGQYFGEITSLaLAPKRIATVRAITTVECLMISGEVLEALWK 376
                   58888999********************7.777774442212366688********999965456**********************9987 PP

>> cNMPbd_u2  Unstructured region on cNMP-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.5   0.5   6.9e-25   1.5e-21       1     153 [.     382     521 ..     382     524 .. 0.86

  Alignments for each domain:
  == domain 1  score: 77.5 bits;  conditional E-value: 6.9e-25
   cNMPbd_u2   1 irsqVEetAreRlktasdeDvemadaesstptssieelaiadlkktsarrkslpevtftepskldspkseddeevlePsDPDPFLsvdldnlRsrsRRg 99 
                 ir+qVE tA++R++  sd+D+  ++ + s++  +i  l+i++ ++ s+ ++s  e tf+   k+ +  +++++++++  DPDPFLs +   +++rsRRg
  KHJ30949.1 382 IRRQVETTAKTRIS-GSDGDILSTELKGSQE--KI--LQIDE-SNISSDNESSTEPTFAPW-KPPGLIETEEKSTVNIIDPDPFLSLNVGYMKARSRRG 473
                 8*************.99********976555..44..44455.56777788999*****97.888888999**************************** PP

   cNMPbd_u2 100 SlAPptpessressptskeessssssetssPklkskhsltppeesearakrart 153
                 S+ Pp pes    sp    + + ++s++ +P l+  + ++ +++s+ r kr++t
  KHJ30949.1 474 SWDPPAPES---LSPE---KGRVTRSKSETPILDRLSCISSQTNSTYRPKRPKT 521
                 *********...4443...456788899999889999999999999999**997 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.24   5.3e+02       5      19 ..     598     613 ..     596     618 .. 0.82
   2 ?    1.9   0.2      0.13     3e+02       2      17 ..     648     664 ..     647     664 .. 0.82
   3 !   11.2   0.0   0.00014      0.32       2      24 .]     712     735 ..     711     735 .. 0.91
   4 !    6.1   0.0    0.0058        13       3      19 ..     740     757 ..     738     759 .. 0.92
   5 ?    2.2   0.0      0.11   2.4e+02       4      24 .]     768     789 ..     767     789 .. 0.86
   6 !    8.0   0.0    0.0015       3.4       5      17 ..     795     808 ..     791     814 .. 0.89
   7 ?    2.3   0.0     0.096   2.1e+02       2      14 ..     818     830 ..     817     842 .. 0.84
   8 ?    2.7   0.0     0.072   1.6e+02       5      23 ..     848     867 ..     844     868 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.24
       LRR_6   5 LteLdLsgNd.IgDeG 19 
                 ++  ++s +  I+DeG
  KHJ30949.1 598 VKIINISNCYhITDEG 613
                 67889999999****9 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.13
       LRR_6   2 nthLteLdLsgNd.IgD 17 
                 + +L+e dLs +  ++D
  KHJ30949.1 648 SKNLEEIDLSNCRkVSD 664
                 679********986665 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 0.00014
       LRR_6   2 nthLteLdLsgNd.IgDeGaeaLa 24 
                 +++L++L Ls+++ I+D  +  La
  KHJ30949.1 712 CPKLKKLKLSYCKhITDRSMAHLA 735
                 89***************9998886 PP

  == domain 4  score: 6.1 bits;  conditional E-value: 0.0058
       LRR_6   3 thLteLdLsgNd.IgDeG 19 
                 + L++ dL+ +  I+D+G
  KHJ30949.1 740 NRLESIDLTRCTtITDAG 757
                 689*************99 PP

  == domain 5  score: 2.2 bits;  conditional E-value: 0.11
       LRR_6   4 hLteLdLsgNd.IgDeGaeaLa 24 
                 +L++L L+++  ++D  +  L+
  KHJ30949.1 768 NLRKLVLADCTyLTDNAIVYLC 789
                 79************98776665 PP

  == domain 6  score: 8.0 bits;  conditional E-value: 0.0015
       LRR_6   5 LteLdLsgNd.IgD 17 
                 L+eLdLs+++ ++D
  KHJ30949.1 795 LRELDLSFCCaLSD 808
                 9*********9998 PP

  == domain 7  score: 2.3 bits;  conditional E-value: 0.096
       LRR_6   2 nthLteLdLsgNd 14 
                 ++hL  L Ls+++
  KHJ30949.1 818 CPHLSILKLSFCG 830
                 89*********96 PP

  == domain 8  score: 2.7 bits;  conditional E-value: 0.072
       LRR_6   5 LteLdLsgNd.IgDeGaeaL 23 
                 L+eL+++g+  ++++G+ea 
  KHJ30949.1 848 LKELSVRGCIrVTGVGVEAV 867
                 99*******99******995 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0         3   6.7e+03       2       9 ..     269     276 ..     268     277 .. 0.83
   2 !   32.5   0.1   2.5e-11   5.6e-08       4      47 ..     531     574 ..     529     575 .. 0.96
   3 ?   -2.6   0.0       2.4   5.3e+03      17      28 ..     652     663 ..     649     666 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 3
  F-box-like   2 srLPdEiL 9  
                 s+LP+++L
  KHJ30949.1 269 SNLPNDLL 276
                 79***998 PP

  == domain 2  score: 32.5 bits;  conditional E-value: 2.5e-11
  F-box-like   4 LPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrrlvl 47 
                 LP  iL++IFs+L+ ++L r+++V+ +W++++ + p+L ++l l
  KHJ30949.1 531 LPSGILIKIFSHLDIYQLMRIRQVSIHWYTLVTSSPFLCHTLDL 574
                 9**************************************99987 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 2.4
  F-box-like  17 ppsdLlrlalVC 28 
                 +  dL++++ V+
  KHJ30949.1 652 EEIDLSNCRKVS 663
                 5559*****998 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.4      0.16   3.5e+02       2      12 ..     267     277 ..     266     278 .. 0.87
   2 !   25.2   0.1   4.8e-09   1.1e-05       6      45 ..     531     570 ..     529     572 .. 0.95
   3 ?    3.1   0.0      0.04        90      16      32 ..     649     665 ..     649     670 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.16
                 HHHHS-HHHHH CS
       F-box   2 tlsrLPsevlr 12 
                  +s+LP+++l+
  KHJ30949.1 267 LFSNLPNDLLH 277
                 69*******96 PP

  == domain 2  score: 25.2 bits;  conditional E-value: 4.8e-09
                 S-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHH CS
       F-box   6 LPsevlrhILerLplsdllalrrVSkgwrilidsdrlwck 45 
                 LPs +l +I+++L+   l ++r+VS +w+ l+ s  + c+
  KHJ30949.1 531 LPSGILIKIFSHLDIYQLMRIRQVSIHWYTLVTSSPFLCH 570
                 9999******************************999986 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.04
                 HTS-HHHHHHHCTT-HH CS
       F-box  16 erLplsdllalrrVSkg 32 
                 ++L+ +dl ++r+VS +
  KHJ30949.1 649 KNLEEIDLSNCRKVSDH 665
                 57999*********965 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.31   6.9e+02       3      14 ..     599     611 ..     597     620 .. 0.68
   2 !    6.5   0.0    0.0071        16       1      12 [.     650     661 ..     650     683 .. 0.80
   3 ?    2.3   0.0      0.18     4e+02       1      19 [.     714     730 ..     714     734 .. 0.77
   4 ?    1.3   0.0      0.37   8.4e+02       1      20 [.     741     758 ..     741     762 .. 0.75
   5 ?   -2.3   0.1       5.6   1.3e+04       1      10 [.     768     777 ..     768     784 .. 0.85
   6 ?    4.9   0.6     0.025        55       2      11 ..     795     804 ..     794     831 .. 0.74
   7 ?    0.4   0.0      0.74   1.6e+03       2      12 ..     848     858 ..     847     870 .. 0.86
   8 ?   -1.4   0.0       2.8   6.3e+03       2      14 ..     874     886 ..     873     912 .. 0.69

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.31
       LRR_1   3 rhLdLsnnpl.lg 14 
                 + +++sn+   ++
  KHJ30949.1 599 KIINISNCYHiTD 611
                 889*****94333 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0071
       LRR_1   1 nLrhLdLsnnpl 12 
                 nL+++dLsn++ 
  KHJ30949.1 650 NLEEIDLSNCRK 661
                 8*********84 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.18
       LRR_1   1 nLrhLdLsnnpllglppns 19 
                 +L++L Ls++   +++++s
  KHJ30949.1 714 KLKKLKLSYCK--HITDRS 730
                 7*********9..566665 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.37
       LRR_1   1 nLrhLdLsnnpllglppnsf 20 
                 +L+++dL+++    ++++ f
  KHJ30949.1 741 RLESIDLTRCT--TITDAGF 758
                 69********7..5555555 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 5.6
       LRR_1   1 nLrhLdLsnn 10 
                 nLr+L L ++
  KHJ30949.1 768 NLRKLVLADC 777
                 8****99888 PP

  == domain 6  score: 4.9 bits;  conditional E-value: 0.025
       LRR_1   2 LrhLdLsnnp 11 
                 Lr+LdLs ++
  KHJ30949.1 795 LRELDLSFCC 804
                 9********9 PP

  == domain 7  score: 0.4 bits;  conditional E-value: 0.74
       LRR_1   2 LrhLdLsnnpl 12 
                 L++L +++++ 
  KHJ30949.1 848 LKELSVRGCIR 858
                 9********96 PP

  == domain 8  score: -1.4 bits;  conditional E-value: 2.8
       LRR_1   2 LrhLdLsnnpllg 14 
                 L+  d+s++ +l+
  KHJ30949.1 874 LELFDVSQCKNLQ 886
                 7778999999833 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.3      0.07   1.6e+02      12      33 ..     261     282 ..     255     294 .. 0.72
   2 ?   -2.4   3.5       3.3   7.3e+03       5      34 ..     571     607 ..     569     616 .. 0.66
   3 !    6.5   0.2    0.0053        12      20      36 ..     646     662 ..     632     667 .. 0.71
   4 !    6.6   0.0    0.0051        11      11      38 ..     699     728 ..     692     729 .. 0.77
   5 !    8.0   0.0    0.0018       4.1       2      38 ..     741     782 ..     740     786 .. 0.87
   6 !    8.1   0.1    0.0017       3.7       2      33 ..     794     829 ..     793     863 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.07
                 ---E-S-HHH-TT..--EEE-.-S CS
       LRR_4  12 qltdiplleklpn..LkeLdLsgN 33 
                  l+++pl+++lpn  L+ L L  N
  KHJ30949.1 261 TLKELPLFSNLPNdlLHLLGL--N 282
                 699***********5544544..4 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 3.3
                 EEE--.SS.---E-S-HHH.-TT....--EEE-.-S- CS
       LRR_4   5 vLdLs.nN.qltdipllek.lpn....LkeLdLsgNn 34 
                 +LdLs  N +lt   l+++ lp      k +++s++ 
  KHJ30949.1 571 TLDLStFNrKLTNNVLINNiLPFvgnrVKIINISNCY 607
                 7888887756887777776666555556666666554 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0053
                 HH-TT--EEE-.-S--- CS
       LRR_4  20 eklpnLkeLdLsgNnli 36 
                 ++ +nL+e+dLs++ ++
  KHJ30949.1 646 NNSKNLEEIDLSNCRKV 662
                 46788888888877544 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.0051
                 S---E-S-...HHH-TT--EEE-.-S----- CS
       LRR_4  11 Nqltdipl...leklpnLkeLdLsgNnlitd 38 
                 + ++++p    + ++p+Lk+L Ls +  itd
  KHJ30949.1 699 TPIQSLPVgtvI-GCPKLKKLKLSYCKHITD 728
                 668899996533.6*********99977765 PP

  == domain 5  score: 8.0 bits;  conditional E-value: 0.0018
                 S--EEE--SS.---E-S-....HHH-TT--EEE-.-S----- CS
       LRR_4   2 nLevLdLsnN.qltdipl....leklpnLkeLdLsgNnlitd 38 
                 +Le++dL  +  +td ++    l+ + nL++L L +++++td
  KHJ30949.1 741 RLESIDLTRCtTITDAGFqhwsLYHFENLRKLVLADCTYLTD 782
                 69999***6549***9999887779*********99999987 PP

  == domain 6  score: 8.1 bits;  conditional E-value: 0.0017
                 S--EEE--.SS---E-S-..HH.H-TT--EEE-.-S CS
       LRR_4   2 nLevLdLs.nNqltdipl..le.klpnLkeLdLsgN 33 
                  L++LdLs  + l+d     l+ ++p+L  L Ls++
  KHJ30949.1 794 GLRELDLSfCCALSDTATevLSlGCPHLSILKLSFC 829
                 59******5569**8666784467*********876 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.28   6.3e+02      23      34 ..     647     658 ..     642     664 .. 0.70
   2 !    9.2   0.0   0.00044      0.98      10      49 ..     697     735 ..     691     751 .. 0.79
   3 ?   -1.2   0.0      0.78   1.7e+03      45      57 ..     763     775 ..     741     780 .. 0.65
   4 ?    0.4   0.1      0.25   5.7e+02       2      33 ..     794     827 ..     793     828 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.28
                 T-TT--EEE--S CS
       LRR_8  23 glsnLkvLdLsn 34 
                 + +nL+++dLsn
  KHJ30949.1 647 NSKNLEEIDLSN 658
                 566777777775 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00044
                 TS-.-SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT-- CS
       LRR_8  10 nNr.ltslddeaFkglsnLkvLdLsnNllttlspgafsgLp 49 
                     ++sl+ ++  g+++Lk L+Ls+   +++  +++++L+
  KHJ30949.1 697 QGTpIQSLPVGTVIGCPKLKKLKLSYC--KHITDRSMAHLA 735
                 45559********************95..888888888886 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.78
                 GTT--S-.EEE-- CS
       LRR_8  45 fsgLpsLrsLdLs 57 
                 + ++++Lr+L L 
  KHJ30949.1 763 LYHFENLRKLVLA 775
                 4455555555554 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.25
                 T-SEEE-TTS-.-SEE-TTSSTT.-TT--EEE-- CS
       LRR_8   2 nLtsLdLsnNr.ltslddeaFkg.lsnLkvLdLs 33 
                 +L++LdLs+   l++   e+ +  +++L +L+Ls
  KHJ30949.1 794 GLRELDLSFCCaLSDTATEVLSLgCPHLSILKLS 827
                 6788888877667777777766448888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (926 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       380  (0.0211947); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.69u 0.26s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 6443.52
//
Query:       KHJ30950.1  [L=108]
Description: putative pre-mrna splicing factor ini1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-52  175.2  10.9    3.4e-52  175.0  10.9    1.0  1  PHF5      PHF5-like protein
  ------ inclusion threshold ------
       0.43    8.4   7.7       0.42    8.4   7.3    1.2  1  PolC_DP2  DNA polymerase II large subunit DP2
        1.2    9.3  16.2        2.3    8.3   2.2    3.0  2  DZR       Double zinc ribbon


Domain annotation for each model (and alignments):
>> PHF5  PHF5-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.0  10.9   5.6e-56   3.4e-52       1     103 [.       1     103 [.       1     104 [. 0.99

  Alignments for each domain:
  == domain 1  score: 175.0 bits;  conditional E-value: 5.6e-56
        PHF5   1 msrhqadlvlcrkqpGtaigklcekcdgkcpicdslvkpatkvricdecsfgkleekciicgskgvsdayyclecvrlekdrdGcpriinvgssktdll 99 
                 msrh++dlv+crkq+G++ig+lc+kcdgkcp+cds+v+p+t vricdecsfg++++kc++cgs+g+sda+yc ec+rlekdrdGcp+iin+gss+tdl+
  KHJ30950.1   1 MSRHHPDLVMCRKQSGISIGRLCDKCDGKCPVCDSYVRPTTLVRICDECSFGNYQNKCVVCGSEGISDAFYCFECTRLEKDRDGCPKIINLGSSRTDLF 99 
                 9************************************************************************************************** PP

        PHF5 100 yekk 103
                 y+kk
  KHJ30950.1 100 YQKK 103
                 **98 PP

>> PolC_DP2  DNA polymerase II large subunit DP2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   7.3     7e-05      0.42     616     662 ..      41      89 ..      21     105 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 7e-05
    PolC_DP2 616 iarrkCkkCgketlearCeeCgek.teeklvCkkceeeve.eekcekce 662
                    r C++C    ++++C  Cg++ ++  ++C +c++ ++ ++ c+k  
  KHJ30950.1  41 TLVRICDECSFGNYQNKCVVCGSEgISDAFYCFECTRLEKdRDGCPKII 89 
                 56799*****************983567799*****9655478899865 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5  14.9    0.0059        35      15      49 .]      30      76 ..      10      76 .. 0.75
   2 ?    8.3   2.2   0.00038       2.3       1      19 [.      58      76 ..      58      87 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0059
         DZR 15 CseCgtklkavaa............edrCpsCgekvdpearfCpeCG 49
                C+ C + +++++             +++C+ Cg++  ++a +C eC+
  KHJ30950.1 30 CPVCDSYVRPTTLvricdecsfgnyQNKCVVCGSEGISDAFYCFECT 76
                66666666533337777777777778********************6 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00038
         DZR  1 CpqCgeelppdarfCseCg 19
                C  Cg+e  +da +C+eC 
  KHJ30950.1 58 CVVCGSEGISDAFYCFECT 76
                7789999999999999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       642  (0.0358079); expected 358.6 (0.02)
Passed bias filter:                      208  (0.0116013); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 835.56
//
Query:       KHJ30951.1  [L=219]
Description: putative effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1562.59
//
Query:       KHJ30952.1  [L=293]
Description: putative pinin sdk mema domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.5e-31  107.6   4.6    4.5e-31  107.6   4.6    2.9  3  Pinin_SDK_memA  pinin/SDK/memA/ protein conserved region


Domain annotation for each model (and alignments):
>> Pinin_SDK_memA  pinin/SDK/memA/ protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1      0.24   4.3e+03      37      46 ..      31      40 ..      20      62 .. 0.44
   2 !  107.6   4.6   2.5e-35   4.5e-31       2     129 ..      82     196 ..      81     197 .. 0.97
   3 ?   -6.2   7.7         1   1.8e+04      58      58 ..     261     261 ..     200     290 .. 0.56

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.24
  Pinin_SDK_memA 37 eiekrleeka 46
                    ++ +   ++a
      KHJ30952.1 31 SLSDNESKRA 40
                    2222222222 PP

  == domain 2  score: 107.6 bits;  conditional E-value: 2.5e-35
  Pinin_SDK_memA   2 eekkRnrRlfgaLlgtLqkfkkeeekqkekeerraeiekrleekakeekeeleerkrekreeleeerraeqkelraleeklelkelmetwhenkk 96 
                     eekkR++Rlfg+Ll+ L++++++   +k    +r ei kr+ ++a+ +k +++ +k  +  ++ + +++eq+++   ee++     m+++h+n+ 
      KHJ30952.1  82 EEKKRGQRLFGGLLNALSQSSQNGP-HK----KRLEIHKRQLDRANIQKTQDDIQKCGRVTKIVAVQKEEQIKF---EEES-----MHIRHANMH 163
                     79*********************94.45....7*****************************************...****.....********* PP

  Pinin_SDK_memA  97 alanflrTktePpiyYlPwkltekteelleeqv 129
                     a+anfl+TkteP++yY+Pw+l ++++e++++q+
      KHJ30952.1 164 AMANFLHTKTEPKLYYRPWELLPEQKERIDSQI 196
                     ******************************996 PP

  == domain 3  score: -6.2 bits;  conditional E-value: 1
  Pinin_SDK_memA  58 r 58 
                     r
      KHJ30952.1 261 R 261
                     2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1296  (0.0722851); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2168.09
//
Query:       KHJ30953.1  [L=165]
Description: putative extracellular chitinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-13   51.4   0.0    1.6e-13   51.1   0.0    1.1  1  Glyco_hydro_18  Glycosyl hydrolases family 18
  ------ inclusion threshold ------
       0.16   11.8   0.7       0.26   11.2   0.7    1.3  1  zf-RING_6       zf-RING of BARD1-type protein


Domain annotation for each model (and alignments):
>> Glyco_hydro_18  Glycosyl hydrolases family 18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.1   0.0   1.8e-17   1.6e-13     223     312 .]      47     144 ..      41     144 .. 0.78

  Alignments for each domain:
  == domain 1  score: 51.1 bits;  conditional E-value: 1.8e-17
                     EEEESEEEEEEESSSSSSTSTTTEEEHHHHHHHH..................TEEEEEEEEETTTTEEEEEETT..EEEEE-SHHHHHHHH.HHH CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxx.xxx RF
  Glyco_hydro_18 223 lGvpfygrawalvsgadntkeegvlsykelkell..................kkakakrkydskakapyvydge..efvsyDdpksikaka.dyv 296
                     l ++f +r++++ ++             ++++++                  ++a a++ +d++a+++y++d     f+++D++  i++k+ d+v
      KHJ30953.1  47 LVLNFANRTYSGSTP-------------DYCNNCqgsafgsgcqtpsisslfQTAIANGITDEDAGGQYYFDRAnnLFWTWDTATLIARKFnDIV 128
                     566777777766555.............2333333334444444444444449999****************9999******************* PP

                     HHTTESEEEEETGGGS CS
                     xxxxxxxxxxxxxxxx RF
  Glyco_hydro_18 297 kakglgGvmiWsldqD 312
                      a+glgGvm+Wsl qD
      KHJ30953.1 129 AARGLGGVMAWSLAQD 144
                     **************99 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.7   2.9e-05      0.26      29      45 ..      62      78 ..      55      95 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.9e-05
   zf-RING_6 29 ifcsncisdcfgsgcpv 45
                 +c nc    fgsgc  
  KHJ30953.1 62 DYCNNCQGSAFGSGCQT 78
                59*************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1200.50
//
Query:       KHJ30954.1  [L=257]
Description: putative short-chain dehydrogenase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-41  141.7   0.0    2.3e-41  141.4   0.0    1.1  1  adh_short       short chain dehydrogenase
    4.4e-32  111.5   0.0    5.2e-32  111.3   0.0    1.0  1  adh_short_C2    Enoyl-(Acyl carrier protein) reductase
      2e-07   31.1   0.0    3.3e-07   30.4   0.0    1.3  1  KR              KR domain
     0.0041   16.6   0.0       0.44   10.0   0.0    2.1  2  Epimerase       NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.014   15.3   0.0       0.02   14.8   0.0    1.5  1  NAD_binding_10  NAD(P)H-binding


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.4   0.0   6.5e-45   2.3e-41       1     192 [.      11     197 ..      11     200 .. 0.95

  Alignments for each domain:
  == domain 1  score: 141.4 bits;  conditional E-value: 6.5e-45
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---S.S--SSGGGCSH CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegakalaiqvDvtdreevealvekavkklgkldvLvnNAGi.tgsgpfselse 98 
                 k ++ tGas+GIG+aia+ l+ +G +v++++r++e+l ++ ke+ e+   + ++ +D++d +   ++v+ka ++++ +d L+ N G  +  +  ++ + 
  KHJ30954.1  11 KSIILTGASRGIGLAIARYLLLSGNRVLCIARTKEPLDNLQKEFPEQ---VAILMGDMKDFQLGAQAVAKALQQFKCIDGLIINHGSlSPLKRLADSDP 106
                 6799****************************************985...*******************************999998788889999999 PP

                 HHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHHHCT CS
   adh_short  99 eewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmakelre 192
                  ew++ +evN+++++ l++ +lp  l++ +GrI+ +sS a+++++a + aY+++Kaa+++l+++la e     i+ +av PG+vdT+m++e+r 
  KHJ30954.1 107 LEWRSAFEVNFFSAIALIQPALPS-LRETKGRIIITSSGAALKSYATWGAYGSAKAALNHLVQTLAAEEPL--ITSIAVRPGVVDTEMQAEIRG 197
                 99**********************.679***************************************9876..9***************99875 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.3   0.0   1.4e-35   5.2e-32       1     227 [.      17     245 ..      17     249 .. 0.89

  Alignments for each domain:
  == domain 1  score: 111.3 bits;  conditional E-value: 1.4e-35
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTTSEE..EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHH CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneeakkrveelaeelgaev..lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsreef 95 
                   Ga +gIG aiA+ l   G +v++  + +e    +++l++e++++v  l  D +d +  +++v+++ ++f+ +D+l+ n g   +  +++++ +  e+
    KHJ30954.1  17 GASRGIGLAIARYLLLSGNRVLCIARTKEP---LDNLQKEFPEQVaiLMGDMKDFQLGAQAVAKALQQFKCIDGLIINHGSLSP-LKRLADSDPLEW 109
                   999*********************999998...99*******99557***********************************99.99********** PP

                   HHHHHHHTHHHHHHHHHHHH.HCTSCCEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTTHHHHHHH CS
  adh_short_C2  96 draldvnlyslfllakaalp.lmkeggsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikgfdellee 191
                   + a++vn+ s+++l++ alp l + +g+i+ +ss +a ++ +   ayg aKaal++l+++lA+e     i+  av pg+++T+++++i+g+d+++++
    KHJ30954.1 110 RSAFEVNFFSAIALIQPALPsLRETKGRIIITSSGAALKSYATWGAYGSAKAALNHLVQTLAAEEPL--ITSIAVRPGVVDTEMQAEIRGNDNVMDQ 204
                   ********************555555*************************************9655..*********************8887765 PP

                   .....HHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEE CS
  adh_short_C2 192 .....learaplgrlgtpeevaeaalfLasdeasyitGqtl 227
                        +++ +  grl +pe+ +++++ L+  + +  +G+ l
    KHJ30954.1 205 tdaekFRKLYREGRLLRPEQPGDVMARLVLGAGREFSGKFL 245
                   11111556666789999999999999998777776666655 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   9.1e-11   3.3e-07       4     174 ..      14     181 ..      12     186 .. 0.85

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 9.1e-11
                 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT.T-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE------.---TTT- CS
          KR   4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal.gaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlr.dklleem 100
                 ++tG+  g+Gl++ar l+ +g+r l + +R+       k+ +++l++    +v ++  D  d +  +++++++ ++++ i G i   g l   k l++ 
  KHJ30954.1  14 ILTGASRGIGLAIARYLLLSGNRVLCI-ART-------KEPLDNLQKEfPEQVAILMGDMKDFQLGAQAVAKALQQFKCIDGLIINHGSLSpLKRLADS 104
                 89*******************987765.677.......34566666654679******************************8877777764799**** PP

                 -HHHHHHHHTTTTHHHHHHHH.HTTT..S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHHHHHTEEEEE CS
          KR 101 taedleqvlapKvkGawnLhe.lled..esldffvlfSSiagllgsagqanYaaaNaflDalaeyrrsqglpavsin 174
                 +  +++++++  +  a  L + +l++  e+   ++++SS a+l   a+ ++Y +a a l+ l+++ ++++   +si+
  KHJ30954.1 105 DPLEWRSAFEVNFFSAIALIQpALPSlrETKGRIIITSSGAALKSYATWGAYGSAKAALNHLVQTLAAEEPLITSIA 181
                 ***********988777776625555877788999*****************************9999887777776 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   0.00012      0.44       1      59 [.      13      78 ..      13      94 .. 0.74
   2 !    4.8   0.0    0.0048        17     135     169 ..     149     184 ..     136     202 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00012
                EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC.....EEEE--TT-HH....HHHHH CS
   Epimerase  1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl.....elveldltdrs....alerl 59
                i++tGa+  iG a++++ll  g +v++++r   +++  +l++       +  +d++d +    a++++
  KHJ30954.1 13 IILTGASRGIGLAIARYLLLSGNRVLCIART--KEPLDNLQKEfpeqvAILMGDMKDFQlgaqAVAKA 78
                789**************************99..44444444445667777777777766444444444 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0048
                 ----SSHHHHHHHHHHHHHHHHHHHH.T-EEEEEEE CS
   Epimerase 135 plkpnspYaaaKlageklveayaaqy.glnaiilrl 169
                 ++++  +Y+ aK+a  +lv+ +aa+   +  i++r+
  KHJ30954.1 149 SYATWGAYGSAKAALNHLVQTLAAEEpLITSIAVRP 184
                 5677889***************99996777788887 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   5.6e-06      0.02       1      60 [.      17      81 ..      17     209 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 5.6e-06
                    TTTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHHCT..TTCEEEE--TT-....CCHHHHHHTT CS
  NAD_binding_10  1 GAtGkvGrllvkellargghevtalvRnpeklaeleae..eglevvegdvtd....vedlaealkg 60
                    GA+ ++G ++++ ll +g  +v  ++R++e l++l++e  e++ ++ gd+ d    ++++a+al++
      KHJ30954.1 17 GASRGIGLAIARYLLLSG-NRVLCIARTKEPLDNLQKEfpEQVAILMGDMKDfqlgAQAVAKALQQ 81
                    9****************6.8*************999777799********9955555777777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 1929.45
//
Query:       KHJ30955.1  [L=330]
Description: putative swirm domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.2e-14   52.1   0.0    1.7e-13   50.7   0.0    1.7  1  SWIRM     SWIRM domain


Domain annotation for each model (and alignments):
>> SWIRM  SWIRM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.0   9.3e-18   1.7e-13       9      88 ..     251     322 ..     246     323 .. 0.93

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 9.3e-18
       SWIRM   9 dslhpiEkellselfngkdktpeeYlkiRnkiialyrenp..keyltvteaqkalkrrrltgidvnllsrihefLerwGlIN 88 
                 + lhp+E +l+s+l+     ++++Yl+++++i+ ++ e     +++++t+aq+a++      idvn++s+++++++++G+++
  KHJ30955.1 251 HLLHPEEIQLASNLR----LDCATYLTSKRRIFVSRLEAYkaGKEFRKTDAQQACR------IDVNKASKLWQAFDKVGWLD 322
                 789************....******************87555888***********......9*****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       699  (0.0389871); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2375.32
//
Query:       KHJ30956.1  [L=410]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-14   54.2   0.0    2.7e-14   53.4   0.0    1.4  1  rve              Integrase core domain
     0.0053   16.5   0.0      0.011   15.5   0.0    1.5  1  rve_3            Integrase core domain
  ------ inclusion threshold ------
      0.042   13.7   0.9      0.073   12.9   0.1    1.9  2  gag_pre-integrs  GAG-pre-integrase domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.4   0.0   4.6e-18   2.7e-14       5     117 ..     111     231 ..     107     233 .. 0.82

  Alignments for each domain:
  == domain 1  score: 53.4 bits;  conditional E-value: 4.6e-18
         rve   5 gelwqvDvtvvripdggg............kayllvvvddfsrlilaealsdemdastvl.alleravarfggvepervlsDngseytskafrefladl 90 
                 ge++++D++ ++  +  +              ++l +vd f+ + +a+++ ++++ +  + + le+   +f +  p+ +++D g+ + +++f+++l + 
  KHJ30956.1 111 GEIIHMDLVGGQ--K--SltptitdksipnATWFLLAVDNFTAWKWAWPVYSKKTVPGQIgHSLEHLKNKFDKT-PKCIHTDSGTGFSNSEFQDLLLSC 204
                 677788887444..1..122345677788889*********************888755505566666666665.************************ PP

         rve  91 girvsftrpgrpqdnGkvErfhrtlkd 117
                 gi+++++  + p++nG+vEr +rt+ +
  KHJ30956.1 205 GIEWQRSFSHAPEQNGIVERNFRTITE 231
                 ************************976 PP

>> rve_3  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.9e-06     0.011       2      44 ..     205     246 ..     204     253 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.9e-06
       rve_3   2 gielsyiapgkPqqNglvEsfngtlrdellneelfrslaeare 44 
                 gie++++  + P qNg vE+ ++t+ +++   +l+ s  ++r+
  KHJ30956.1 205 GIEWQRSFSHAPEQNGIVERNFRTITEKMRALHLQ-SGLQLRQ 246
                 899**************************999998.6666655 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   1.2e-05     0.073      26      66 ..      56      94 ..      37      95 .. 0.85
   2 ?   -3.3   0.1       1.5   8.7e+03      47      60 ..     172     184 ..     168     185 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.2e-05
  gag_pre-integrs 26 lWHrRLGHpsfsrlkkLfkkgllpglkiskse.vCeaCqlgK 66
                      WH+ LGHp+ ++     k+   +g+ i k++  Ce+C + K
       KHJ30956.1 56 DWHSILGHPGQKAQDAALKS---AGIAIHKFPlDCEICTKVK 94
                     5**************99997...66666664449****8776 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.5
  gag_pre-integrs  47 llpglkisksevCe 60 
                      +l++ k++k ++C 
       KHJ30956.1 172 HLKN-KFDKTPKCI 184
                      5555.788888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 3107.67
//
Query:       KHJ30957.1  [L=213]
Description: putative sedlin n-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-15   56.2   0.0    5.6e-15   55.6   0.0    1.3  1  Sedlin_N  Sedlin, N-terminal conserved region


Domain annotation for each model (and alignments):
>> Sedlin_N  Sedlin, N-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.6   0.0   3.1e-19   5.6e-15       1     130 [.      12     197 ..      12     198 .. 0.92

  Alignments for each domain:
  == domain 1  score: 55.6 bits;  conditional E-value: 3.1e-19
    Sedlin_N   1 iigkkdnplyelefssskekeeke..............lkeL.nqfilhasLDivedlqwktnnlylgkvdkf.......eklsvsayvtnskikflll 77 
                 +igk++nply+++f s + + +++              l+ L ++ il a+LDi++ ++  +++  +g v  +       e l+ +++ tn++++f+ l
  KHJ30957.1  12 VIGKNNNPLYIAHFPSGEPQLSPPtkqkqekeqhkellLTPLqTSLILSATLDIFQARAAANQSAGAGLVGDYgllhaidERLAAYGFETNTDVRFVAL 110
                 7**************9997766656777889997777777778899***************999999999988888888899***************** PP

    Sedlin_N  78 hes........................ssskkkdekikqffqevhelyvktlmnPFy..........kvneeirSpaFdkkvkklak 130
                 ++                          s   +d ++k  f+ +++ y++ l nPF           + +++i+Sp+F ++++++++
  KHJ30957.1 111 VDLrgrlipsdamtgaattvasaatslGSLGLRDGELKVVFKSMQNAYIRLLQNPFFdpdeyllngsNSGKRITSPKFVEEIRRIGE 197
                 ***********************999989999*************************99999**999999************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       322  (0.0179597); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 1766.27
//
Query:       KHJ30958.1  [L=650]
Description: putative mitochondrial atpase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-56  192.3   0.1    1.3e-24   86.8   0.0    4.1  4  AFG1_ATPase   AFG1-like ATPase
    1.9e-07   31.6   1.0    3.4e-06   27.5   0.4    3.0  2  AAA_16        AAA ATPase domain
      4e-06   27.1   0.1    1.2e-05   25.6   0.1    1.8  1  AAA_22        AAA domain
    0.00021   21.3   0.0    0.00048   20.1   0.0    1.6  1  AAA_5         AAA domain (dynein-related subfamily)
    0.00028   21.3   0.1    0.00079   19.9   0.0    1.8  2  AAA           ATPase family associated with various cellular 
      0.004   17.1   0.2      0.053   13.4   0.1    2.5  3  NACHT         NACHT domain
  ------ inclusion threshold ------
      0.013   16.0   1.3       0.63   10.5   0.1    3.1  3  ABC_tran      ABC transporter
      0.045   13.0   0.0      0.088   12.0   0.0    1.4  1  KAP_NTPase    KAP family P-loop domain
      0.059   13.4   0.0       0.21   11.6   0.0    1.9  1  AAA_14        AAA domain
      0.077   12.3   0.2        0.2   11.0   0.0    1.7  2  FtsK_SpoIIIE  FtsK/SpoIIIE family
       0.12   11.9   0.0       0.31   10.5   0.0    1.6  2  AAA_7         P-loop containing dynein motor region
       0.12   12.3   0.0        1.1    9.1   0.0    2.3  1  ATPase_2      ATPase domain predominantly from Archaea
       0.14   11.8   0.0       0.22   11.1   0.0    1.2  1  T3SS_HrpK1    Type III secretion system translocator protein,
       0.15   11.4   0.0       0.31   10.4   0.0    1.4  1  Mg_chelatase  Magnesium chelatase, subunit ChlI


Domain annotation for each model (and alignments):
>> AFG1_ATPase  AFG1-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.8   0.0   9.8e-28   1.3e-24      58     174 ..      95     222 ..      39     227 .. 0.91
   2 !    6.4   0.0    0.0028       3.6     184     213 ..     260     289 ..     254     349 .. 0.74
   3 !   86.6   0.0   1.2e-27   1.5e-24     234     333 ..     355     454 ..     336     459 .. 0.93
   4 !    7.3   0.0    0.0015       1.9     327     361 ..     545     579 ..     541     580 .. 0.83

  Alignments for each domain:
  == domain 1  score: 86.8 bits;  conditional E-value: 9.8e-28
  AFG1_ATPase  58 svepvrglYlwGgvGrGKtylmdlffeslpvekkrrvhfhafmarvhdeltklr...........kekdplaivadrlaeearvlCfDEfevsDiada 144
                  + ++++gl ++G vG GK++l++l  + lp++kk++ hf+ fm+++ ++l++lr           + + +l   a+ l e + +l +DEf++ D a +
   KHJ30958.1  95 NLQSPQGLLVHGEVGSGKSMLINLLADGLPTRKKHKWHFNTFMLETLAKLEQLRrsrsqsnfkdeNSEHSLLWLAKDLIERSPILFIDEFQLPDRATS 192
                  56899*********************************************************99988999**************************** PP

  AFG1_ATPase 145 mllsrLleaLfargvtlvaTSNiaPedLyk 174
                   +ls+Ll   f+ g +l+aTSN++P++L+k
   KHJ30958.1 193 KILSQLLTIFFQLGGVLIATSNRMPDELLK 222
                  ****************************98 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0028
  AFG1_ATPase 184 paIdlleshlevlevdggvDYRlrklrqae 213
                   ++++l+ ++e+ +++g++D+R ++ +   
   KHJ30958.1 260 GFVEVLKARCEIWNMEGQRDWRRQEAEDMA 289
                  5899******************99877655 PP

  == domain 3  score: 86.6 bits;  conditional E-value: 1.2e-27
  AFG1_ATPase 234 ltsgepeaestlevkaRklrvraaagdlvrfsfaelceaarsqsdYlalaerfhtvlledVpvltkakedaarRfiaLvDelYdadvklvvsaevale 331
                  +++++  +++tl+v aR++ v+++ +++ + +f elce + ++ dY+ la r+ht++l++Vpv+t +++++arR+i+L+D+lY+a  kl+v ae+++ 
   KHJ30958.1 355 ILTPNSWRTETLRVYARNVVVPRQLNGVTYWKFDELCEGPLGPADYISLASRYHTFVLDGVPVMTLVQKNEARRLITLLDALYEARCKLIVRAEAEPD 452
                  5567778899**************************************************************************************98 PP

  AFG1_ATPase 332 el 333
                   l
   KHJ30958.1 453 SL 454
                  77 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.0015
  AFG1_ATPase 327 evaleelyeagrlefefeRtaSRLlelqsedylar 361
                  + + +  +++++ +f ++R+ SRL e+  +++ +r
   KHJ30958.1 545 DFTKTSSFTGEDERFAYKRACSRLWEMCGAKWHSR 579
                  5555667889999**************99999876 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.4   2.7e-09   3.4e-06      12     161 ..      87     201 ..      82     210 .. 0.73
   2 ?   -1.0   0.0       1.6   2.1e+03     121     121 ..     327     327 ..     246     445 .. 0.59

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 2.7e-09
      AAA_16  12 LlsalervrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleealaavpe 110
                 L+++ e+++ ++p+ +l++Ge G+GKs l++ l++ l ++     + k++ +           ++   e l++l++  +s++++ +++   e+ +    
  KHJ30958.1  87 LTDYEEAINLQSPQGLLVHGEVGSGKSMLINLLADGLPTR----KKHKWHFN-----------TFML-ETLAKLEQLRRSRSQSNFKD---ENSE---- 162
                 4555568888999*********************988877....34444444...........3433.44444444434444444444...3334.... PP

      AAA_16 111 lagaeasrllellkrllallsrderplvlvlDdlqwadeaslqllaaLlrl 161
                       ++ll l k+l+      er  +l++D++q  d a+ ++l++Ll+ 
  KHJ30958.1 163 ------HSLLWLAKDLI------ERSPILFIDEFQLPDRATSKILSQLLTI 201
                 ......99999999999......5568********************9975 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.6
      AAA_16 121 e 121
                  
  KHJ30958.1 327 I 327
                 1 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.1   9.7e-09   1.2e-05       7     115 ..     101     201 ..      95     215 .. 0.69

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 9.7e-09
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdl.lrellralglelkaerlsseellealeqalraravielliiDEaqhlr 104
                  l+v+Ge+G+GK++l++ l++ l+ ++k++++  ++++ tl++++   +l +++  +++++       +se+ l  l++ l +r+   +l iDE+q  +
  KHJ30958.1 101 GLLVHGEVGSGKSMLINLLADGLPTRKKHKWHFNTFMLETLAKLE---QLrRSRSQSNFKD------ENSEHSLLWLAKDLIERSP--ILFIDEFQLPD 188
                 589*********************998887755555555555555...4434455566663......3555666666666666666..79999999954 PP

      AAA_22 105 ..seealeeLrsl 115
                   + ++l++L ++
  KHJ30958.1 189 raTSKILSQLLTI 201
                 4557777777554 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   3.8e-07   0.00048       2      89 ..     102     199 ..     101     202 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 3.8e-07
                 EEEE--SSSSHHHHHHHGGGGB......S--EEEEE--TT--HHHHH--B--.........--------....G-SEEEEESGGG--HHHHHHHHHHH CS
       AAA_5   2 vlLvGppGtgKselaerlaaal......nreveyvqltrdtteedlkgrreikngttslvdsplvraar....egeilvlDEveraesevlnsLlsll 89 
                 +l+ G+ G+gKs+l+  la  l      ++ +++ +l    + e+l+ +r+ +n + + ++ +l   a+    ++ il++DE++  ++++ ++L +ll
  KHJ30958.1 102 LLVHGEVGSGKSMLINLLADGLptrkkhKWHFNTFMLETLAKLEQLRRSRSQSNFKDENSEHSLLWLAKdlieRSPILFIDEFQLPDRATSKILSQLL 199
                 7899*******************9999999999******99**********9977777777777777778889**********988888888888887 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   6.1e-07   0.00079       1     115 [.     102     220 ..     102     224 .. 0.65
   2 ?   -2.7   0.1       5.6   7.2e+03      40      80 ..     283     324 ..     264     350 .. 0.60

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 6.1e-07
                 EEEESSTTSSHHHHHHHHHHHH......THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS...........TSEEEEEETGGGHHHHHTTCCCHHH CS
         AAA   1 vllyGppGtGKTllakavakel......gvefleisgsellskyvgesekkirelfkeakeka...........kpsilfiDEidalaksrsgseseee 82 
                 +l++G  G GK++l++ +a  l      + +f ++ + +l  k+ + + ++ +  fk+  ++            +  ilfiDE+     +r       +
  KHJ30958.1 102 LLVHGEVGSGKSMLINLLADGLptrkkhKWHFNTFMLETLA-KLEQLRRSRSQSNFKDENSEHsllwlakdlieRSPILFIDEFQLP--DR------AT 191
                 699******************86665443333333333333.4333333333333333222112455555555445********865..44......46 PP

                 HHHHHHHHHHHHHTTTSSSTEEEEEEESS.GGGS CS
         AAA  83 ervvnqLlteldgvkkkeskvivigatnr.pdkl 115
                 +++++qLlt + ++       ++i+++nr pd+l
  KHJ30958.1 192 SKILSQLLTIFFQLGG-----VLIATSNRmPDEL 220
                 999*******999988.....9*******76766 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 5.6
                 THHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH..TTCCCH CS
         AAA  40 gesekkirelfkeakekakpsilfiDEidalaksr..sgsese 80 
                 +e+e+  re  +++++++    +f+   d+   ++  +++ ++
  KHJ30958.1 283 QEAEDMAREASQTIENSN-ENMVFLAQRDSNSVTQdsEEKRKS 324
                 455555566666665555.567777766666666533333444 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.1   4.1e-05     0.053       3      45 ..     102     144 ..     100     156 .. 0.78
   2 ?   -1.7   0.0       1.9   2.4e+03      98     125 ..     152     180 ..     143     201 .. 0.80
   3 ?    0.2   0.0       0.5   6.4e+02      85     134 ..     410     452 ..     370     468 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.1e-05
                 EEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEETTTT CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegklpqgafklvFflslrel 45 
                 ++++Ge GsGK++L+  la+ + ++k  + +f  + + +l++l
  KHJ30958.1 102 LLVHGEVGSGKSMLINLLADGLPTRKKHKWHFNTFMLETLAKL 144
                 689*******************999988766665555555555 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.9
                 CH............HHHHHCTTTTT--EEEE CS
       NACHT  98 gq...kekqpvrtlLselirkkllpeaslll 125
                 +q   k++++ + lL  ++ k l+ ++++l 
  KHJ30958.1 152 SQsnfKDENSEHSLL--WLAKDLIERSPILF 180
                 344558889999999..99999999999986 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.5
                 EEEE-STT-SS-TCH.........HHHHHCTTTTT--EEEEEEECCCHHH CS
       NACHT  85 lilDglDelvtdlgqkekqpvrtlLselirkkllpeasllltvrpralrd 134
                 ++lDg+  +        k+++r+l+ +l+ +  l ea+++l+vr +a +d
  KHJ30958.1 410 FVLDGVPVMTLVQ----KNEARRLI-TLLDA--LYEARCKLIVRAEAEPD 452
                 7777776655432....44667777.88888..88899999999888766 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1    0.0005      0.63      12      36 ..     100     124 ..      93     165 .. 0.70
   2 ?   -0.4   0.0       1.2   1.6e+03     115     134 ..     164     183 ..     159     185 .. 0.89
   3 ?    2.0   0.0      0.21   2.7e+02      41      78 ..     303     342 ..     288     392 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.0005
                 SEEEEEESTTSSHHHHHHHHTTSS- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  12 ekvaivGenGaGKStLlkllagllk 36 
                 + + + Ge G+GKS L++lla  l 
  KHJ30958.1 100 QGLLVHGEVGSGKSMLINLLADGLP 124
                 556789**************97654 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHTSSEEEEES CS
                 xxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 115 qrvalarallkkpkllllDE 134
                 + + la+ l++++++l++DE
  KHJ30958.1 164 SLLWLAKDLIERSPILFIDE 183
                 67889**************9 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.21
                 EEEETTCEGGG..B-HHHCCHCEEEE-SS--S-TTSBHHH CS
                 xxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  41 eilldgkdlke..qeleslrkeigvlpqepqlfpeltvre 78 
                  + l ++d+++  q+ e+ rk++++lp++ +l++ +t +e
  KHJ30958.1 303 MVFLAQRDSNSvtQDSEEKRKSFSILPKNFFLKSMITEAE 342
                 4555566666677899*************99999997444 PP

>> KAP_NTPase  KAP family P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   6.9e-05     0.088      17      58 ..      96     136 ..      80     154 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 6.9e-05
  KAP_NTPase  17 latpivvgLygkWGsGKssllnkledelkefakpvrflfaef 58 
                 l+ p  + + g+ GsGKs l+n+l d l ++ k+ +++f +f
  KHJ30958.1  96 LQSPQGLLVHGEVGSGKSMLINLLADGLPTR-KKHKWHFNTF 136
                 5666677889999******************.9999999776 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00017      0.21       6      81 ..     103     192 ..      99     217 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00017
      AAA_14   6 vitGaRrvGKTtllkqlikell...vkkesilyinldderd.......kkladpekllelileklke...........ekktylflDEiqevpewek 81 
                 ++ G   +GK++l++ l++ l     +k ++  + l++  +       +         + ++++ +e           e+  +lf+DE q  +++ +
  KHJ30958.1 103 LVHGEVGSGKSMLINLLADGLPtrkKHKWHFNTFMLETLAKleqlrrsR-------SQSNFKDENSEhsllwlakdliERSPILFIDEFQLPDRATS 192
                 67788889******99998888644344444444455544444443331.......2222222211122333344566799*********8776554 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00015       0.2      10      59 ..      71     119 ..      65     128 .. 0.89
   2 ?   -3.4   0.1       3.8   4.9e+03     106     127 ..     138     160 ..     137     166 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00015
                   HHHT---TTEEEEEEETTS-EEEEEGGGS-.SEEEE--TTSSHHHHHHHH CS
  FtsK_SpoIIIE  10 kfrtessqlpvalgkeisgnplvldlkkmashllvaGatgsGKStalntL 59 
                    f +e++++ +al ++ ++  + ++l++    llv+G  gsGKS  +n L
    KHJ30958.1  71 LFSNEKKSNSLALTRVLTDYEEAINLQSPQ-GLLVHGEVGSGKSMLINLL 119
                   68899999*****************99988.9************999866 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 3.8
                   HHHHHHHHHHHHHHH.HHHHHTT CS
  FtsK_SpoIIIE 106 lraleeLvkemeery.alfreag 127
                   l++l++L++++++r  + f++++
    KHJ30958.1 138 LETLAKLEQLRRSRSqSNFKDEN 160
                   68999******999856677765 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00025      0.31      31      68 ..      97     134 ..      85     155 .. 0.77
   2 ?   -3.9   0.0       6.7   8.5e+03     102     113 ..     177     188 ..     173     191 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00025
       AAA_7  31 knkkpvllvGptGtGKtviikdllkkldkekylsltin 68 
                 ++ + +l+ G++G+GK+++i+ l + l+++k    ++n
  KHJ30958.1  97 QSPQGLLVHGEVGSGKSMLINLLADGLPTRKKHKWHFN 134
                 5667789********************96554444443 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 6.7
       AAA_7 102 lvvFvDDlnmpa 113
                  ++F+D++ +p 
  KHJ30958.1 177 PILFIDEFQLPD 188
                 589*****9996 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00087       1.1      12      76 ..      91     154 ..      84     212 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00087
    ATPase_2  12 eeilerepneiyfiYGpegsGKtaLlkeiienledkdkyviyyialreesiskldefieeeeekk 76 
                 ee ++ ++ + +++ G  gsGK+ L++ ++  l   +k++  ++ +  e ++kl++  + +++++
  KHJ30958.1  91 EEAINLQSPQGLLVHGEVGSGKSMLINLLADGLPTRKKHKWHFNTFMLETLAKLEQLRR-SRSQS 154
                 6777777888899********************99999999999999999999988722.22222 PP

>> T3SS_HrpK1  Type III secretion system translocator protein, HrpF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00017      0.22     128     193 ..     240     308 ..     223     323 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00017
  T3SS_HrpK1 128 ggglttkedladLqkn...aglsaalknaakawstdGlfdaldraGedkatekaDkllsaknlssfikd 193
                   gl++k+++ +L+ n   ag+ + lk+ +++w  +G  d   +  ed a+e +  + ++++   f+++
  KHJ30958.1 240 FLGLSRKSQVSNLSINneyAGFVEVLKARCEIWNMEGQRDWRRQEAEDMAREASQTIENSNENMVFLAQ 308
                 56899********5442346999*****************99999******999988888777777764 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00024      0.31      25      80 ..     102     158 ..      93     169 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00024
  Mg_chelatase  25 lllvGppGsGKtmlakrlpsllpplseee.alevakiasvagkkeeekllkrrpfra 80 
                   ll+ G  GsGK+ml++ l+  lp  ++++  +++ +++++a+ ++ ++  ++  f++
    KHJ30958.1 102 LLVHGEVGSGKSMLINLLADGLPTRKKHKwHFNTFMLETLAKLEQLRRSRSQSNFKD 158
                   8999****************9999877661456777788888777777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (650 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       897  (0.0500307); expected 358.6 (0.02)
Passed bias filter:                      615  (0.034302); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.68u 0.24s 00:00:00.92 Elapsed: 00:00:00.40
# Mc/sec: 4911.85
//
Query:       KHJ30959.1  [L=389]
Description: putative delta-aminolevulinic acid dehydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.9e-119  396.9   0.0   7.3e-119  396.6   0.0    1.1  1  ALAD      Delta-aminolevulinic acid dehydratase


Domain annotation for each model (and alignments):
>> ALAD  Delta-aminolevulinic acid dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  396.6   0.0  4.1e-123  7.3e-119       5     317 .]      68     386 ..      64     386 .. 0.97

  Alignments for each domain:
  == domain 1  score: 396.6 bits;  conditional E-value: 4.1e-123
                 GGGGSSHHHHHHC-S----GGGEEEEEEEESS-SS-EE-TTSTT-EEEEGGGHHHHHHHHHHTT--EEEEEEE-.SS..-BSS-GGGGSTTSHHHHHHH CS
        ALAD   5 rrlrksealrelvretrlsasdlilplfvkegeeekeeiksmpgvyrlsvdelvkeveelvklgikavllFgvp.ee..kdeegsealnedglvqrair 100
                 +  ++++  r++++e++l++s+lilp+f+++++++++ i+s+pg    ++++++  +e lv+ g+++v++Fgvp +   kd+ g++a++++g+v ++ir
  KHJ30959.1  68 HGGYSHPLARSWQAERQLTKSMLILPIFISDNDDQETIIPSLPGNCIRGINKVIPYLEPLVQNGLRSVIIFGVPlAPciKDALGTAADDPTGPVITSIR 166
                 56688999******************************************************************63378******************** PP

                 HHHHH-TTSEEEEEE-STTTBSS-SSSEEE.SS.EEHHHHHHHHHHHHHHHHHCT-SEEEE-S--TTHHHHHHHHHHHTT-.TT-EEB---EEB--CGG CS
        ALAD 101 aikeevpelvvitDvclceytshGhcgile.ekevdndetlellakvavsqaeaGadivapSdmmDgrvaaireaLdeagf.eevailsYsaKyaSafY 197
                  +++++p+l++i+DvclceytshGhcgil+ +++++nd +++++++va+++a+aGa++vapSdm Dgr++ai+ +L e+g+ ++v ++sY+aK++ ++Y
  KHJ30959.1 167 LLRQRFPSLFIIADVCLCEYTSHGHCGILReDGSLNNDMSVDRISDVAIAYAHAGAHCVAPSDMNDGRIRAIKLKLIEEGIsHRVVLMSYAAKFSGCLY 265
                 *****************************62556**********************************************97889************** PP

                 HHHHHHHT---S.S--TTTSB-TT-HHHHHHHHHHHHHTT-SBEEEES-TTGHHHHHHHHTT-.SS-EEEEE-HHHHHHHHHHHHTTSS-HHHHHHHHH CS
        ALAD 198 gPFrdaaesapsfgdrktYqmdpansrealreveldleeGADivmvKPalaylDiirevkeef.dlpvaayqvSGEYamikaaaengwldekkvvlEsl 295
                 gPFrdaa+s p+fgdrk+Yq+++  +  a r++++d++eGADivmvKPa  ylDii+++ke   +lp+aayqvSGEYami+aaa++g++d k++++E++
  KHJ30959.1 266 GPFRDAAGSVPTFGDRKCYQLPAGGRGLARRAISRDINEGADIVMVKPASLYLDIISDAKEIGkNLPIAAYQVSGEYAMIHAAAKAGVFDLKTMAFEAM 364
                 *************************************************************9889********************************** PP

                 HHHHHTT-SEEEETTHHHHHH. CS
        ALAD 296 lsikRAGadliltYfakevakl 317
                  +i RAGa+++++Yf+++++++
  KHJ30959.1 365 EGILRAGATIVISYFTPDFLNW 386
                 ******************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2812.03
//
Query:       KHJ30960.1  [L=438]
Description: hypothetical protein EV44_g3290 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.017   15.3   0.5       0.34   11.1   0.2    3.0  2  SR1P        SR1 protein
      0.025   15.1   0.3      0.025   15.1   0.3    2.7  3  Stc1        Stc1 domain
       0.86   10.3   3.3        2.5    8.8   0.2    2.8  3  FYDLN_acid  Protein of unknown function (FYDLN_acid)
        1.2    9.3   7.6        3.7    7.7   1.2    2.4  2  Fer4_11     4Fe-4S dicluster domain
        8.7    6.7  21.3       0.88    9.8   3.3    3.9  3  IBR         IBR domain, a half RING-finger domain


Domain annotation for each model (and alignments):
>> SR1P  SR1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   9.4e-05      0.34       4      36 ..     134     166 ..     133     167 .. 0.91
   2 ?    0.2   0.0      0.23   8.3e+02       5      22 ..     396     411 ..     396     412 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 9.4e-05
        SR1P   4 IvCqtCnatI..dhfedekVttLYgtCnqceCkka 36 
                 I+C++C +t   + f + +   LY+tC   +C+++
  KHJ30960.1 134 ILCRKCKKTCppESFANSSSNSLYATCL--DCRSQ 166
                 99*******87789*************6..99987 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.23
        SR1P   5 vCqtCnatIdhfedekVt 22 
                 +C +C a+  hf +e+V+
  KHJ30960.1 396 ICPSCKAL--HFSSERVK 411
                 79999997..99999997 PP

>> Stc1  Stc1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   4.4      0.19   6.7e+02      52      83 ..      58      88 ..      29      90 .. 0.81
   2 ?   15.1   0.3     7e-06     0.025      53      84 ..     134     164 ..     103     165 .. 0.91
   3 ?   -4.0   0.0         5   1.8e+04      39      46 ..     394     401 ..     380     403 .. 0.58

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.19
                EEE-SSS--EEESTTS-HHHHHS.SS---HHH CS
        Stc1 52 eleCsaCqktkpldeFsksqrrkpdaarCkdC 83
                   C+ C+k    + F    r+k + ++C dC
  KHJ30960.1 58 TTFCKGCRKNCHPSLFYDDIRNK-SFKQCSDC 88
                35699***********9999999.8999*999 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 7e-06
                 EE-SSS--EEESTTS-HHHHHS.SS---HHHH CS
        Stc1  53 leCsaCqktkpldeFsksqrrkpdaarCkdCv 84 
                 + C  C+kt p ++F++s+ ++   a+C dC 
  KHJ30960.1 134 ILCRKCKKTCPPESFANSSSNS-LYATCLDCR 164
                 78*******************9.9*******5 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 5
                 ----TTTS CS
        Stc1  39 kikCkect 46 
                 +  C +c+
  KHJ30960.1 394 NSICPSCK 401
                 33444443 PP

>> FYDLN_acid  Protein of unknown function (FYDLN_acid)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.2         5   1.8e+04      10      20 ..      83      93 ..      82     103 .. 0.86
   2 ?    8.8   0.2   0.00071       2.5      25      88 ..     132     198 ..     129     216 .. 0.54
   3 ?    0.8   0.0      0.22   7.9e+02       4      34 ..     388     402 ..     385     421 .. 0.59

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 5
  FYDLN_acid 10 riCpscgakFY 20
                ++C +c ++ Y
  KHJ30960.1 83 KQCSDCRRRVY 93
                57999999988 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00071
  FYDLN_acid  25 dPivcpkcgeefepeevlksraaaaeaeeakkkkeeeedeedeeeeedvsdedadeeeee....dddd 88 
                  Pi c kc+++ +pe++++s +++  a    + ++++++++  +  e  s++   +++++    +ddd
  KHJ30960.1 132 APILCRKCKKTCPPESFANSSSNSLYATCL-DCRSQQHERRYPTVFEPTSLQHPINNNDDlydvSDDD 198
                 6****************6655555444433.3333333333333344444433333222222224444 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.22
  FYDLN_acid   4 pelGtKriCpscgakFYDLnkdPivcpkcge 34 
                  +lG                    +cp+c++
  KHJ30960.1 388 HDLG----------------EMNSICPSCKA 402
                 4444................44445555554 PP

>> Fer4_11  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   1.2     0.001       3.7      26      85 ..      43      99 ..      32     106 .. 0.77
   2 ?    4.6   0.6    0.0095        34      45      85 ..     134     174 ..     120     180 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.001
     Fer4_11 26 aivkdeetGaVlldektkkeevrevveacPykivrkneetgkvekCdmcldrveaGllpa 85
                a+++d+ t  + ++ +t+   ++ +++ c  + ++++ +++ +++C  c  rv a + p 
  KHJ30960.1 43 AVHEDN-TLNITCNTNTT--FCKGCRKNCHPSLFYDDIRNKSFKQCSDCRRRVYARRHPE 99
                555544.44455554444..699******************************9888876 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0095
     Fer4_11  45 eevrevveacPykivrkneetgkvekCdmcldrveaGllpa 85 
                   +r+++++cP + + + ++++  + C  c +++++ + p+
  KHJ30960.1 134 ILCRKCKKTCPPESFANSSSNSLYATCLDCRSQQHERRYPT 174
                 46899*************************99998877776 PP

>> IBR  IBR domain, a half RING-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   3.3   0.00025      0.88      31      59 ..      44      71 ..      30      74 .. 0.81
   2 ?   -0.2   7.6      0.33   1.2e+03      21      58 ..     136     169 ..      72     172 .. 0.62
   3 ?   -0.3   0.0      0.37   1.3e+03      39      45 ..     395     401 ..     378     410 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00025
         IBR 31 eksegcksvtCskCgfefCfnCkkewHeg 59
                 +++++ ++tC+  ++ fC  C+k+ H++
  KHJ30960.1 44 VHEDNTLNITCN-TNTTFCKGCRKNCHPS 71
                445556679***.99************86 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.33
         IBR  21 CprpdCeaiieksegcksvtCskCgfefCfnCkkewHe 58 
                 C   +C++ + +++  +s   s+  +++C++C+++ He
  KHJ30960.1 136 CR--KCKKTCPPESFANS--SSNSLYATCLDCRSQQHE 169
                 44..55555544444333..344567788888877776 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.37
         IBR  39 vtCskCg 45 
                 + C++C+
  KHJ30960.1 395 SICPSCK 401
                 3466665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       639  (0.0356406); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3202.58
//
Query:       KHJ30961.1  [L=359]
Description: hypothetical protein EV44_g3608 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2607.29
//
Query:       KHJ30962.1  [L=673]
Description: hypothetical protein EV44_g3089 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.076   13.3   0.1       0.22   11.8   0.1    1.7  1  Lzipper-MIP1   Leucine-zipper of ternary complex factor MIP1
      0.093   12.7   1.7        5.8    6.9   0.8    2.9  2  DUF1726        Domain of unknown function (DUF1726)
       0.13   12.3   1.9       0.37   10.8   1.9    1.7  1  OTT_1508_deam  OTT_1508-like deaminase


Domain annotation for each model (and alignments):
>> Lzipper-MIP1  Leucine-zipper of ternary complex factor MIP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   3.7e-05      0.22       9      60 ..     295     348 ..     290     352 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.7e-05
  Lzipper-MIP1   9 LeqeveqLqerLqeeeklrraLekal.ssssdgsllslstllp.kkakellkei 60 
                   L +e  +Lq  L++e+++ ++L+  l +s  ++s ++l ++ p +  + l++++
    KHJ30962.1 295 LLNELRHLQLSLDKEFRTEKVLHTKLiNSCRNISACQLACFKPsNTLTGLISDL 348
                   67899******************9997555569999999999945667777765 PP

>> DUF1726  Domain of unknown function (DUF1726)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.8   0.00098       5.8      57      86 ..     403     432 ..     388     439 .. 0.80
   2 ?    3.1   0.0     0.015        90      41      67 ..     612     638 ..     603     646 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.00098
     DUF1726  57 dfhkklvveplteevkkrfnkrfirklkeh 86 
                 ++h+k+ +++ ++e +k+f++rf+++++++
  KHJ30962.1 403 NCHSKYHSKSEQDEARKKFKRRFVKRFDNM 432
                 789999999888999999999999998876 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.015
     DUF1726  41 iilllppleelkqlytdfhkklvvepl 67 
                  +l l ++++lk +y+++++klv+++ 
  KHJ30962.1 612 FLLSLSDMDKLKVFYDNIKNKLVTPSG 638
                 678899*****************9975 PP

>> OTT_1508_deam  OTT_1508-like deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.9   6.3e-05      0.37      16      47 ..     380     410 ..     366     426 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 6.3e-05
  OTT_1508_deam  16 dkekqepryIgcSKpaCylCelylrahgkatl 47 
                    +++k++ +y  +SK+ Cy+Ce   + h+k++ 
     KHJ30962.1 380 NQNKHKSNYQSTSKRRCYVCEKPNC-HSKYHS 410
                    23334489*************9875.444554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (673 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1804  (0.100619); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:01.61
# Mc/sec: 1269.16
//
Query:       KHJ30963.1  [L=631]
Description: putative fumarate reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-85  287.4   0.2    2.4e-85  287.2   0.2    1.1  1  FAD_binding_2  FAD binding domain
    2.1e-22   79.0   0.0    1.1e-20   73.5   0.0    2.7  2  Cyt-b5         Cytochrome b5-like Heme/Steroid binding domain
    4.5e-14   52.8   0.1    8.3e-14   51.9   0.1    1.4  1  DAO            FAD dependent oxidoreductase
    7.9e-09   35.4   0.5    3.3e-08   33.3   0.5    1.9  1  FAD_oxidored   FAD dependent oxidoreductase
    1.2e-07   31.9   2.0    5.1e-07   29.8   0.3    2.8  3  NAD_binding_8  NAD(P)-binding Rossmann-like domain
    4.6e-07   29.4   0.6    4.3e-06   26.2   0.2    2.4  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
      5e-06   25.5   1.5      0.005   15.6   0.1    3.2  3  HI0933_like    HI0933-like protein
    1.9e-05   24.1   0.1       0.16   11.2   0.0    2.3  2  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
    0.00019   20.8   0.7      0.028   13.7   0.1    2.5  2  Thi4           Thi4 family
    0.00025   20.2   2.5      0.086   11.9   0.7    2.3  2  GIDA           Glucose inhibited division protein A
    0.00047   19.6   0.5       0.24   10.6   0.2    3.3  4  Amino_oxidase  Flavin containing amine oxidoreductase
     0.0031   16.8   0.9     0.0087   15.3   0.7    1.7  2  FAD_binding_3  FAD binding domain
  ------ inclusion threshold ------
      0.013   14.8   0.3      0.024   13.9   0.3    1.4  1  AlaDh_PNT_C    Alanine dehydrogenase/PNT, C-terminal domain
      0.022   15.3   1.9        2.9    8.5   0.3    3.0  2  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase
       0.12   12.2   0.0        0.3   10.9   0.0    1.6  1  IF2_N          Translation initiation factor IF-2, N-terminal


Domain annotation for each model (and alignments):
>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  287.2   0.2     2e-88   2.4e-85       2     417 .]       5     445 ..       4     445 .. 0.95

  Alignments for each domain:
  == domain 1  score: 287.2 bits;  conditional E-value: 2e-88
                    EEEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGSGGGG--S-EE-TT..SSGGSTC.CHHHHHHHHHHHHTTT-S-HHHHHHHHHTHHHHHHHHH CS
  FAD_binding_2   2 viViGsGlAGLaAAleaaeaGlkvavvekeqefggatawsqGgidavlspeqkkagikdspelhrtdtlkaldeladqplveafveaapeavdeLe 97 
                    viV+G+Gl+GL+AA+++  aG +v+v++k + fgg+++ +  gi+ +l+++q +++i+ds+++   dtlk++++ a ++l+++++ ++++av++L+
     KHJ30963.1   5 VIVVGGGLSGLSAAHTIYLAGGNVLVLDKQGFFGGNSTKATSGINGALTRTQVDSNIQDSVKQFYDDTLKSARDKARPDLIKVLTYKSAAAVEWLQ 100
                    9*********************************************************************************************** PP

                    HT.T----BCCTSSB-EEE-TT-SSTEEEE-.STT-......HHHHHHHHHHHHHHTCT......EEEEESEEEEEEEECTTEEEEEEEEETTTTC CS
  FAD_binding_2  98 el.gvpfsrtedgpvdvrelGglsatartlhdaadarretlvtghallarlvesarkag......vdfqerteadeLivedgrvtGavvenpesgr 186
                    +  g++++        v++lGg+s++ rt++   da++    +g a+ ++l++++++++      v++  ++++++L+ e++++tG++ ++ ++++
     KHJ30963.1 101 DVfGLDLTL-------VSRLGGHSQP-RTHR-GHDAKF----PGMAITYALMQRLEELAtlaperVQIIKKAKVTSLNKEGNKITGVTYTFNNESN 183
                    *99******.......**********.****.777755....999999999999988888899***************************887777 PP

                    EEEEEESEEEE-----GG...............GSSSBSSGTT-S-HHHHHHHCTTSSEES..TT-EEEEEEEET....TTTB...B--THHHHTT CS
  FAD_binding_2 187 evrirakavvlatgGfgr.....allkellgaaaeaettnapavtGdglalalragaalnddrmeevqfhPtslvpirdgsgi...LitealrgeG 274
                    +v   +  v+latgG+ +     +llk++++     ++tn +++tGdg++++ + g++  d  m++vq hPt+lv+++d+      L  ealrgeG
     KHJ30963.1 184 TV---DGPVILATGGYAAdfsetSLLKKYRPDTFHLSSTNGVHATGDGQKMVMAIGGNGID--MDKVQVHPTGLVDPKDPGSKwkfLAAEALRGEG 274
                    66...57***************************************************888..************88877666799********** PP

                    -EEE-TTSSBTHGGGS-HHHHHHHHH.HHHHTTTS........CCBEEEE-TT......................SSHHHHHHHSHHHHHHHHHCC CS
  FAD_binding_2 275 gilvdkdGrrFmnelasrdvvsrailekeiaeggs........eanvyldash.....................gldaegleatleaineeaangl 341
                    g+l+++dG rF  el +rd vs  ++ ke+++g+         +a+ +ld++                      g+  e+l++t++++n++a  + 
     KHJ30963.1 275 GLLLNADGDRFCDELGHRDYVSGEMW-KEKDRGKFpirlilnsKASNVLDFHTrhysgrglmkkmtgkelakeiGCSTEHLQKTFNEYNDIALGNK 369
                    **************************.888777776778888877778888779****************************************** PP

                    T......S-TTTSEEE........EEEEEEEES-EEEBETTSBESTTEEESSBTEEE-STCEESSSSTTS--TTHHH CS
  FAD_binding_2 342 dkdfgrgidpadrpip.gpfyavkvvpaqhytmgGvetdengrvldadgqpipGLYAaGevaaggvhganrlgGnsl 417
                    +++fg+++ ++   +   +f+ + + p  h+tmgGve++++++vl+ +g+p +GLYA+Ge a ggvhganrlgG+sl
     KHJ30963.1 370 KDPFGKKFFHNFPVNVdDDFHVALMEPVLHFTMGGVEINDKAQVLNTEGKPFDGLYACGELA-GGVHGANRLGGSSL 445
                    *99999999888877799********************************************.************98 PP

>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.14   1.7e+02      13      52 ..     309     348 ..     298     370 .. 0.72
   2 !   73.5   0.0   9.3e-24   1.1e-20       1      73 [.     551     622 ..     551     623 .. 0.97

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.14
                 EEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHH CS
      Cyt-b5  13 dlwvairgkVYDvskflskhpGgesailkyaGkDateafk 52 
                 ++ ++++ k  +v +f  +h  g+++++k  Gk + +++ 
  KHJ30963.1 309 PIRLILNSKASNVLDFHTRHYSGRGLMKKMTGKELAKEIG 348
                 566677788888889998888999*********7766553 PP

  == domain 2  score: 73.5 bits;  conditional E-value: 9.3e-24
                 EHHHHTTTECTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHHHHHHHGGEEEEE CS
      Cyt-b5   1 tleelskhngkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekdaekllkkylvGkl 73 
                 ++ee++khn+k+dlwv+i+g V Dvs++l++hpGg +a++++ GkDa+e+f    h++++++k+  + ++G+l
  KHJ30963.1 551 SMEEVAKHNTKEDLWVVIKGVVMDVSNWLEEHPGGPQALMNFMGKDASEEFSML-HDDEVIAKYAPSQVIGRL 622
                 579*************************************************99.*********999****98 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   0.1     7e-17   8.3e-14       1     211 [.       4     207 ..       4     245 .. 0.69

  Alignments for each domain:
  == domain 1  score: 51.9 bits;  conditional E-value: 7e-17
                 EEEEECTSHHHHHHHHHHHHTT..EEEEESSSSTTSSGGGSSEEEEESSSSTHHSTHHHHHHHHHH.HHHHHHHHHHHSSTTSEEEEEEEEEES.SHHH CS
         DAO   1 dvviiGGGiiGlstAyeLarrg..VtllekgdiagsgaSgrnsgllhsglrylpeaselarlslea.leelreleeelgididyrrtGllslaa.deee 95 
                 +v+++GGG  Gls+A+    +g  V++l+k+ ++g g S +++  + ++l  ++         +++  +++++  ++ +   d  r+ l+ + + +  +
  KHJ30963.1   4 RVIVVGGGLSGLSAAHTIYLAGgnVLVLDKQGFFG-GNSTKATSGINGALTRTQVD----SNIQDSvKQFYDDTLKS-A--RDKARPDLIKVLTyK--S 92 
                 59****************98877********9999.99999999999988534433....55666623555666665.4..355566666664313..3 PP

                 HHHHHHHHHHHHHTTTTEEEEEHHHHHHHS.TTSTTTSEE.EEETTEEEEEHHHHHHHHHHHHHHT..T-EEEESECEEEEEEEETCEEEEE...EECT CS
         DAO  96 lealdkllallleagldaelldaeevrele.palpgllga.lfypdtgqvdpakltaalaraaeal..Gveilegtevtgleeedgkvwgve...rttp 187
                  +a+ ++l+++  +gld  l+++  +   + p  + ++g    +p  g + +++l++ l + a  +   v+i+++++vt+l++e++k++gv    ++  
  KHJ30963.1  93 AAAV-EWLQDV--FGLDLTLVSR--LGGHSqP--RTHRGHdAKFP--GMAITYALMQRLEELATLApeRVQIIKKAKVTSLNKEGNKITGVTytfNN-- 180
                 6677.888874..6777667777..3333314..22333124444..5666888999988885443336************9999******775533.. PP

                 EEEEEEEE.EEE--GGGHH.HH.HTT.C CS
         DAO 188 gendaada.vVnaaGawsd.ll.gll.k 211
                 ++n ++d  v++a+G ++  ++   l k
  KHJ30963.1 181 ESN-TVDGpVILATGGYAAdFSeTSLlK 207
                 333.35668********99666433333 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   0.5   2.7e-11   3.3e-08       2     140 ..       5     191 ..       4     197 .. 0.71

  Alignments for each domain:
  == domain 1  score: 33.3 bits;  conditional E-value: 2.7e-11
  FAD_oxidored   2 vvVvGGgpaGvaAAiaAaraGakvlLveergvlGGlltsglvatdignkaee..qvvtgiareflerlrq..rgga..........rlkkrskw.n. 82 
                   v+VvGGg++G+ AA +   aG +vl+++++g+ GG++t++  +     +  +  + ++  +++f++   +  r++a          + +++ +w + 
    KHJ30963.1   5 VIVVGGGLSGLSAAHTIYLAGGNVLVLDKQGFFGGNSTKATSGINGALTRTQvdSNIQDSVKQFYDDTLKsaRDKArpdlikvltyKSAAAVEWlQd 101
                   9***********************************9988865544433333554444445555554444333333446666653322255555537 PP

  FAD_oxidored  83 ..............................tfepevakavleeml..aeagvtvllntrlvevekegkriesvtveskegrktirAkvfi 140
                                                 +    ++ + lee+   a ++v+++ ++++++ +keg++i++vt   +++  t+ ++v++
    KHJ30963.1 102 vfgldltlvsrlgghsqprthrghdakfpgMAITYALMQRLEELAtlAPERVQIIKKAKVTSLNKEGNKITGVTYTFNNESNTVDGPVIL 191
                   899999999999999999998888876665333333444444444777789***************99******9766689999888875 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.3   4.3e-10   5.1e-07       1      41 [.       7      49 ..       7      72 .. 0.83
   2 ?   -0.9   0.0       1.7     2e+03      29      48 ..     111     130 ..     104     147 .. 0.74
   3 ?   -1.3   0.0       2.3   2.7e+03      21      48 ..     160     188 ..     129     209 .. 0.61

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 4.3e-10
                   EE--SHHHHHHHHHHHCCTEEEEEE-SSSSSSGGG-EECE..T CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagfdvlllekrdrlGGraasyev..p 41
                   +vG+GlsGl+aA+++  ag +vl+l+k+  +GG+++ ++   +
     KHJ30963.1  7 VVGGGLSGLSAAHTIYLAGGNVLVLDKQGFFGGNSTKATSgiN 49
                   8**********************************99887444 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.7
                    SSSSGGG-EECETTCEECTS CS
  NAD_binding_8  29 drlGGraasyevpgvrvdyg 48 
                    +rlGG+++ +++ g+ ++ +
     KHJ30963.1 111 SRLGGHSQPRTHRGHDAKFP 130
                    68999999999977554443 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 2.3
                    EEEEE-S.SSSSSGGG-EECETTCEECTS CS
  NAD_binding_8  21 dvlllek.rdrlGGraasyevpgvrvdyg 48 
                    +v+ l k ++++ G  ++++++ ++vd +
     KHJ30963.1 160 KVTSLNKeGNKITGVTYTFNNESNTVDGP 188
                    33333332456666666666666666655 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.2   3.6e-09   4.3e-06       2     116 ..       4     203 ..       3     240 .. 0.83
   2 ?    0.1   0.0      0.31   3.7e+02     249     280 ..     404     433 ..     396     441 .. 0.62

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 3.6e-09
                  SEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHH.......................................... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......................................... RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcllskallgvaedaeias.......................................... 57 
                  +v+v+GgG  Gl+aa+t+  ag++v++++++g + ++    ++ + g+  ++++ s                                          
   KHJ30963.1   4 RVIVVGGGLSGLSAAHTIYLAGGNVLVLDKQGFFGGNSTKATSGINGALTRTQVDSniqdsvkqfyddtlksardkarpdlikvltyksaaavewlqd 101
                  79**************************77776666666678899999999999999999************************************** PP

                  .........................................HHHHCHHHH.CCCCHCCTCEEEEESCEEEEETEEECTCEEEEEESEEEE---EEE-B CS
                  .........................................xxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  58 .........................................evvkklnqg.ielllgeevvkidpgkkkvklekkkegdeekiaydklvlAtGssprd 113
                                                           e++  l  + ++ +++++v+++ ++  k++  + + ++e +  ++ ++lAtG+ + d
   KHJ30963.1 102 vfgldltlvsrlgghsqprthrghdakfpgmaityalmqrlEELATLAPErVQIIKKAKVTSLNKEGNKITGVTYTFNNESNTVDGPVILATGGYAAD 199
                  ***********************************99999966666666668888888899998888888886666599999999*********9999 PP

                  C.TC CS
                  x.xx RF
  Pyr_redox_2 114 l.gi 116
                  +  +
   KHJ30963.1 200 FsET 203
                  9433 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.31
                  T-EEEETTEEE--TTSBESSTTEEE-GGGCTE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 249 glelderggivvdeflrtnvpgiyaiGDvagg 280
                  g+e+ ++ + v +  ++   +g+ya+G  agg
   KHJ30963.1 404 GVEI-NDKAQVLNTEGK-PFDGLYACGELAGG 433
                  5555.333333344443.49********9943 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   4.2e-06     0.005       2      36 ..       4      38 ..       3      72 .. 0.90
   2 ?    4.3   0.0     0.012        14     118     166 ..     147     197 ..     122     200 .. 0.83
   3 ?    3.0   0.1     0.028        34     355     407 ..     400     456 ..     378     458 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4.2e-06
                 SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS- CS
  HI0933_like  2 dviviGgGaAGlmaAisaakrgkrVlllekakklg 36
                 +viv+GgG +Gl aA ++  +g +Vl+l+k+  +g
   KHJ30963.1  4 RVIVVGGGLSGLSAAHTIYLAGGNVLVLDKQGFFG 38
                 79****************************97666 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.012
                  HHHHHT-EEE-S--EEEEECETTE.EEEEE...TTEEEEESEEEE----SS CS
  HI0933_like 118 elkeagvklrletevksvekeedgkfrvkt..kseeeleadklvlAtGGlS 166
                  +l  ++v++  + +v+s++ke +++  v++  ++e++     ++lAtGG +
   KHJ30963.1 147 TLAPERVQIIKKAKVTSLNKEGNKITGVTYtfNNESNTVDGPVILATGGYA 197
                  455679******************999998655666777778*******76 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.028
                  EEEEEE-GGG.B-TTT-BBTTSTTEEE-GGGB.SEEE..-TTTHHHHHHHHHHHHHH CS
  HI0933_like 355 vTaGGVdlke.vssktmeskkvpgLffaGEvl.Dveg..vtGGynlqaAwasgyaAG 407
                   T+GGV+++   +    e k   gL+ +GE+   v+g   +GG  l  + + g +AG
   KHJ30963.1 400 FTMGGVEINDkAQVLNTEGKPFDGLYACGELAgGVHGanRLGGSSLLGCVVYGRVAG 456
                  59****9975155566788999********963466633588888888888888887 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   0.00022      0.26     166     210 ..       4      48 ..       2      87 .. 0.69
   2 !   11.2   0.0   0.00013      0.16     206     273 ..     130     202 ..     116     222 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00022
  Pyr_redox_3 166 kvvViGgknSavDaAlelvrkgaeVtvvtrgseiekeesdpsysl 210
                  +v+V+Gg+ S+  aA  ++ +g +V v++++     ++++    +
   KHJ30963.1   4 RVIVVGGGLSGLSAAHTIYLAGGNVLVLDKQGFFGGNSTKATSGI 48 
                  678888888888888888888888888887776666665555555 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00013
  Pyr_redox_3 206 psyslkpdienrleelvke..ekikvlfnaevkeikekeeey...kvktedgkkvevkddvvlat.Gykpdlsf 273
                  p + +     +rleel +   e+++++++a+v++++++ +++   +  t ++++ +v+  v+lat Gy  d+s 
   KHJ30963.1 130 PGMAITYALMQRLEELATLapERVQIIKKAKVTSLNKEGNKItgvTY-TFNNESNTVDGPVILATgGYAADFSE 202
                  56678888899999998878999*************99988743133.4455788999******7578888764 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.1   2.3e-05     0.028      18      58 ..       3      42 ..       1      72 [. 0.85
   2 ?    4.9   0.0     0.011        13     202     232 ..     411     441 ..     402     443 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.3e-05
                EEEEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--TTTT CS
        Thi4 18 sDvvivGaGssGLtaayylakkpdlkvailersvspGGGaw 58
                s v++vG+G sGL+aa+++  + + +v++l+++  +GG + 
  KHJ30963.1  3 SRVIVVGGGLSGLSAAHTIYLA-GGNVLVLDKQGFFGGNST 42
                679**************99999.889******999999765 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.011
                 HHHHHHECEEETTEEE-THHHHHHHT-EB-- CS
        Thi4 202 daivkktrevvpnlyvaGmevaevdganRmG 232
                 ++++++  + +++ly++G  +  v+ganR+G
  KHJ30963.1 411 AQVLNTEGKPFDGLYACGELAGGVHGANRLG 441
                 4566777899********************9 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.7   7.2e-05     0.086       2      28 ..       5      31 ..       4      58 .. 0.85
   2 !    7.9   0.0    0.0012       1.4     113     154 ..     156     199 ..     138     245 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.2e-05
                EEEE-SSHHHHHHHHHHHHTT--EEEE CS
        GIDA  2 viViGgGhAGceAAlaaarlGakvlLi 28
                viV+GgG++G+ AA ++  +G +vl +
  KHJ30963.1  5 VIVVGGGLSGLSAAHTIYLAGGNVLVL 31
                9*******************9999987 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0012
                 EEES-EEEEEECTTEEEEEEETTS-EEEEC..EEEE--TT-BT- CS
        GIDA 113 iieeeveeliveekkvkgvvtedgetikak..avviatGtflkg 154
                 i +++v++l+ e +k++gv+ + +++ ++    v++atG + + 
  KHJ30963.1 156 IKKAKVTSLNKEGNKITGVTYTFNNESNTVdgPVILATGGYAAD 199
                 44679****9999*****99877766665555*******98765 PP

>> Amino_oxidase  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.2    0.0002      0.24       1      30 [.      12      41 ..      12      53 .. 0.90
   2 ?    3.4   0.0     0.031        38     214     271 ..     140     201 ..      68     226 .. 0.74
   3 ?   -3.4   0.0       3.6   4.3e+03     214     251 ..     466     503 ..     464     508 .. 0.83
   4 ?    1.3   0.0      0.14   1.7e+02     331     364 ..     580     612 ..     567     616 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.0002
                   HHHHHHHHHHHHTTEEEEEEESSSSSBTTS CS
  Amino_oxidase  1 laGLaaArqLlsaGfdVtvlEardrvGGRi 30
                   l+GL+aA++   aG +V+vl  ++ +GG  
     KHJ30963.1 12 LSGLSAAHTIYLAGGNVLVLDKQGFFGGNS 41
                   79**************************75 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.031
                    HHHHH....TTTTEEEETSEEEEEEEEETTC...EEEEETTSTEEEESE.EEE-S-HHHHHSSEEE CS
  Amino_oxidase 214 ealae....elrgldirlntrVkeikregdg...vtvtledgevveaDa.VvvTvplgvlkailfs 271
                    ++l+e       +++i   ++V+++++eg++   vt t+ + e++++D  V++++  +++    fs
     KHJ30963.1 140 QRLEElatlAPERVQIIKKAKVTSLNKEGNKitgVTYTF-NNESNTVDGpVILATGGYAAD---FS 201
                    444445557778999999*********999985455544.5555688888***99999887...33 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 3.6
                    HHHHHTTTTEEEETSEEEEEEEE.ETTCEEEEETTSTEE CS
  Amino_oxidase 214 ealaeelrgldirlntrVkeikr.egdgvtvtledgevv 251
                    +ala  ++  ++rln+    i+  ++++++v+  +g+++
     KHJ30963.1 466 DALAG-ISTAKLRLNQISLHIDPsQPGKISVEWNSGKSI 503
                    78888.999999***999999999999999998888876 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.14
                    CCSTTTEEEEEEEEECHHHHHHHTTS-HHHHHHH CS
  Amino_oxidase 331 srappgkglvllvyvggdaaneleslsdeelvqa 364
                    + ++pg + +l+ ++g da +e+  l d+e++++
     KHJ30963.1 580 E-EHPGGPQALMNFMGKDASEEFSMLHDDEVIAK 612
                    3.455555559****9999999988888888765 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.7   7.3e-06    0.0087       3      33 ..       4      34 ..       3      49 .. 0.92
   2 ?   -2.0   0.0       1.4   1.6e+03     110     153 ..     141     185 ..      80     198 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 7.3e-06
                   EEEEE--SHHHHHHHHHHHHTTHHEEEEESS CS
  FAD_binding_3  3 dVlIVGaGpaGlmlallLseaGvrvvlvekr 33
                    V++VG+G++Gl++a+    aG +v++++k+
     KHJ30963.1  4 RVIVVGGGLSGLSAAHTIYLAGGNVLVLDKQ 34
                   69***************************97 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.4
                    HHHHHHHHHT..EEETCSEEEECCEECCCCCCCEEEECCTTEEEEE CS
  FAD_binding_3 110 iLvehaeerg..lqvrfktevesleqdeegvtaevrdketgeeetv 153
                     L+e a+ ++  +q+ +k++v+sl+++++++t + +  ++ e +tv
     KHJ30963.1 141 RLEELATLAPerVQIIKKAKVTSLNKEGNKITGVTYTFNN-ESNTV 185
                    4444455555457888888899999999998887665533.33355 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.3     2e-05     0.024      28      60 ..       2      34 ..       1      65 [. 0.95

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2e-05
                 --EEEEESTSHHHHHHHHHHHHTT-EEEEEESS CS
  AlaDh_PNT_C 28 pakvlviGgGvaGlqAiatakglgakVtvlDvr 60
                 p++v+v+GgG  Gl+A++t    g +V vlD++
   KHJ30963.1  2 PSRVIVVGGGLSGLSAAHTIYLAGGNVLVLDKQ 34
                 799***************************985 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.3    0.0024       2.9       1      29 [.       4      32 ..       4      46 .. 0.82
   2 ?    4.9   0.1     0.033        39      53      78 ..     151     176 ..     132     183 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0024
                EEEEECSSHHHHHHHHHHHHTTSEEEEEE CS
   Pyr_redox  1 kvvvvGgGyiglElAgalaelgkkVtvve 29
                +v+vvGgG++gl +A ++   g +V v++
  KHJ30963.1  4 RVIVVGGGLSGLSAAHTIYLAGGNVLVLD 32
                79*************99877776666665 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.033
                 TTEEEECSEEEEEEEEETTSEEEEEE CS
   Pyr_redox  53 ngievllntkveeiegsedgvesvkl 78 
                 + ++++ ++kv++++++++++++v+ 
  KHJ30963.1 151 ERVQIIKKAKVTSLNKEGNKITGVTY 176
                 489*****************999987 PP

>> IF2_N  Translation initiation factor IF-2, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00025       0.3       1      27 [.     335     361 ..     335     368 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00025
       IF2_N   1 mskirVyeLAkeLgvkskevikkLfke 27 
                 m+k++ +eLAke+g + + + k+++++
  KHJ30963.1 335 MKKMTGKELAKEIGCSTEHLQKTFNEY 361
                 99*********************9774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (631 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       616  (0.0343577); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.68u 0.32s 00:00:01.00 Elapsed: 00:00:00.45
# Mc/sec: 4239.37
//
Query:       KHJ30964.1  [L=467]
Description: putative pre-mrna splicing factor prp46 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.2e-44  147.3  17.6    6.3e-09   36.3   0.3    7.3  7  WD40         WD domain, G-beta repeat
    3.5e-06   27.2   0.6        2.2    8.6   0.0    4.6  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
      0.013   14.2   3.2         11    4.5   0.0    4.2  4  Nup160       Nucleoporin Nup120/160
       0.14   11.4   0.0       0.33   10.2   0.0    1.6  2  WD40_like    WD40-like domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   0.3   1.4e-12   6.3e-09       2      38 .]     149     186 ..     148     186 .. 0.92
   2 !   29.2   0.0   2.5e-10   1.1e-06       2      38 .]     191     228 ..     190     228 .. 0.94
   3 !   27.5   0.3   8.6e-10   3.8e-06       2      38 .]     233     270 ..     232     270 .. 0.96
   4 !   20.5   0.1   1.4e-07   0.00061       2      38 .]     275     312 ..     274     312 .. 0.84
   5 !   12.9   0.0   3.5e-05      0.16       1      38 []     316     353 ..     316     353 .. 0.93
   6 !   17.4   0.1   1.3e-06    0.0059       4      38 .]     360     394 ..     357     394 .. 0.88
   7 !   10.8   0.0   0.00016      0.74      18      38 .]     424     444 ..     397     444 .. 0.80

  Alignments for each domain:
  == domain 1  score: 36.3 bits;  conditional E-value: 1.4e-12
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++ r+++GH ++v++la+ pd++w++sG  D+t++iWd
  KHJ30964.1 149 KLARVISGHlGWVRALAVEPDNQWFVSGAGDRTIKIWD 186
                 667899**********************56*******9 PP

  == domain 2  score: 29.2 bits;  conditional E-value: 2.5e-10
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 q+  tltGH s v++la+sp +++l+s+++D+ v+ Wd
  KHJ30964.1 191 QLRLTLTGHiSTVRGLAVSPRHPYLFSCGEDKMVKCWD 228
                 67789********************************9 PP

  == domain 3  score: 27.5 bits;  conditional E-value: 8.6e-10
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + +r++ GH s+v+ l+ +p  + l++G++Dg  r+Wd
  KHJ30964.1 233 KVIRHYHGHlSGVYTLSLHPTLDVLVTGGRDGVARVWD 270
                 5689*********************************9 PP

  == domain 4  score: 20.5 bits;  conditional E-value: 1.4e-07
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++++l+GH + v+ l+ +   + ++++s D tvr+Wd
  KHJ30964.1 275 SNIHVLSGHkGTVSELKCQEADPQVITSSLDSTVRLWD 312
                 689******555999987777777888999*******9 PP

  == domain 5  score: 12.9 bits;  conditional E-value: 3.5e-05
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g+++++lt H ++v++l  +p    +a+Gs  g+++ W+
  KHJ30964.1 316 GKTMGVLTHHkKGVRALTIHPKEFTFATGS-TGSIKQWK 353
                 578899**9*999*****************.*******6 PP

  == domain 6  score: 17.4 bits;  conditional E-value: 1.3e-06
                 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 ++ ++GH+s ++ la++ d+ ++ sG+d+g+  +Wd
  KHJ30964.1 360 MQNFDGHNSiINTLAVNEDNVLF-SGGDNGSMSFWD 394
                 6789***7757***********7.7**********9 PP

  == domain 7  score: 10.8 bits;  conditional E-value: 0.00016
                 EETTSSEEEEEETTSEEEEEE CS
        WD40  18 fspdgawlasGsdDgtvriWd 38 
                 f++ g  l++G  D+t++iW+
  KHJ30964.1 424 FDRTGLRLICGEADKTIKIWK 444
                 7777778999977*******6 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00049       2.2      25      76 ..     143     196 ..     130     202 .. 0.78
   2 !    4.7   0.0    0.0084        38      39      78 ..     201     240 ..     194     249 .. 0.89
   3 !    6.1   0.1     0.003        13      19      88 ..     224     291 ..     218     295 .. 0.81
   4 !    6.7   0.1    0.0019       8.7      27      85 ..     266     330 ..     248     335 .. 0.76
   5 ?    1.2   0.0       0.1   4.6e+02      38      79 ..     367     407 ..     350     414 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00049
  ANAPC4_WD40  25 ngqrvwtl..eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  +++  w+l    +++ + vr+La +pd++ ++ +  d ++++ d  +g++  +l
   KHJ30964.1 143 EWHAPWKLarVISGHLGWVRALAVEPDNQWFVSGAGDRTIKIWDLATGQLRLTL 196
                  566666663333455677******************************987665 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0084
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                  s+vr+La +p    L    +d  v+  d e+ kv+++++ 
   KHJ30964.1 201 STVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHG 240
                  789*********************************9865 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.003
  ANAPC4_WD40  19 llvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                  + +  l+ ++v     +++ s v  L+ +p   +L+ +  dg  r+ d+ +   +h ls ++  +v+ l+
   KHJ30964.1 224 VKCWDLETNKVIRH-YHGHLSGVYTLSLHPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHKG-TVSELK 291
                  55556666777766.5677788999********************************999988.487776 PP

  == domain 4  score: 6.7 bits;  conditional E-value: 0.0019
  ANAPC4_WD40  27 qrvwtl.......eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavt 85 
                   rvw++         ++++++v++L+ ++ +     +  d++vrl d   gk++  l+ +++  v 
   KHJ30964.1 266 ARVWDMrtrsnihVLSGHKGTVSELKCQEADPQVITSSLDSTVRLWDLAAGKTMGVLTHHKKG-VR 330
                  45555555555554467899999**99999999999999*************99999888773.55 PP

  == domain 5  score: 1.2 bits;  conditional E-value: 0.1
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                  +s ++ La + ++++L  + ++g++++ d ++g+  ++l+++
   KHJ30964.1 367 NSIINTLAVN-EDNVLFSGGDNGSMSFWDWKTGHRYQALDTT 407
                  5566666655.568999***************9988887766 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.016        70     239     253 ..     179     193 ..     165     206 .. 0.87
   2 ?    4.5   0.0    0.0025        11     231     255 ..     213     237 ..     199     247 .. 0.87
   3 ?    2.0   0.0     0.014        62     231     253 ..     255     277 ..     243     296 .. 0.85
   4 ?    3.3   0.1    0.0058        26     233     255 ..     299     321 ..     284     404 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.016
                 T-EEEEEETTTTEEE CS
      Nup160 239 dgkLrvWnlltgkcl 253
                 d+++++W+l+tg++ 
  KHJ30964.1 179 DRTIKIWDLATGQLR 193
                 99**********975 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0025
                 TEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 231 tylfalsrdgkLrvWnlltgkclat 255
                  ylf+   d+ ++ W+l+t+k++++
  KHJ30964.1 213 PYLFSCGEDKMVKCWDLETNKVIRH 237
                 58999999*************9986 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.014
                 TEEEEEETT-EEEEEETTTTEEE CS
      Nup160 231 tylfalsrdgkLrvWnlltgkcl 253
                 ++l++  rdg+ rvW+ +t + +
  KHJ30964.1 255 DVLVTGGRDGVARVWDMRTRSNI 277
                 56777789**********98865 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.0058
                 EEEEETT-EEEEEETTTTEEEEE CS
      Nup160 233 lfalsrdgkLrvWnlltgkclat 255
                 + + s+d ++r+W+l+ gk++ +
  KHJ30964.1 299 VITSSLDSTVRLWDLAAGKTMGV 321
                 67889**********99998765 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.61   2.7e+03       8      34 ..     166     192 ..     163     235 .. 0.74
   2 ?   10.2   0.0   7.4e-05      0.33       3     144 ..     245     391 ..     243     405 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.61
   WD40_like   8 iskkgslilyGgkddkctvlklesles 34 
                 ++++++ ++ G+ d ++++ +l ++++
  KHJ30964.1 166 VEPDNQWFVSGAGDRTIKIWDLATGQL 192
                 556777778888888888887777654 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 7.4e-05
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvkllddd.lilvvtlDGtillsllenee.evenekieedistvkviddklliGt 99 
                 +Y++ + +  ++++ Gg+d  ++v ++++   + ++ + +  v   k  + d +++  +lD t+ l +l  ++ +   ++ +  +   ++  +++   t
  KHJ30964.1 245 VYTLSLHPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHKGTVSELKCQEADpQVITSSLDSTVRLWDLAAGKtMGVLTHHKKGVRALTIHPKEFTFAT 343
                 89999999999************************************9999889999**************9953334666777877777777776655 PP

   WD40_like 100 .nkGsiyvfsk.dlqleevllgqsseIkeikie.nnkiysLsesafiv 144
                  ++Gsi  ++  +  + + + g++s I+ + ++ +n+++s  ++  + 
  KHJ30964.1 344 gSTGSIKQWKCpEGAFMQNFDGHNSIINTLAVNeDNVLFSGGDNGSMS 391
                 378999998742557888899999999999865157788876666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3265.18
//
Query:       KHJ30965.1  [L=590]
Description: putative spermine spermidine synthase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.5e-06   25.9   0.0    9.5e-06   25.1   0.0    1.4  1  Spermine_synth   Spermine/spermidine synthase domain
  ------ inclusion threshold ------
      0.014   15.3   0.0      0.027   14.4   0.0    1.4  1  Methyltransf_30  S-adenosyl-L-methionine-dependent methyltran
      0.042   14.6   0.0      0.078   13.7   0.0    1.4  1  Methyltransf_25  Methyltransferase domain
      0.077   13.0   0.0       0.13   12.2   0.0    1.3  1  Methyltransf_17  S-adenosyl-L-methionine methyltransferase
       0.16   12.7   0.0       0.36   11.6   0.0    1.6  1  Methyltransf_12  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Spermine_synth  Spermine/spermidine synthase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   2.7e-09   9.5e-06      25     131 ..     353     453 ..     337     481 .. 0.82

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 2.7e-09
                     ESSTTSHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHSHHHHTTCGGCTTEEEEESTCHHHHCTCSS...-EEEEEEECCSTTCSSCG..CSSHH CS
  Spermine_synth  25 iGGgDGgvlrevvkhntvekitlvdiDqkvidfskkflpslaisafndarvklvlgdgfkflkayek...kfdvvivdsldpvgpaen..lFske 114
                     +G g G +   ++ h    + t+v+iD  v df +k++   ++        + ++ d++ + +++ +   k+d+++ d     g ae   lF+ e
      KHJ30965.1 353 VGLGIGTTPSALIEHG--INTTIVEIDPVVYDFAQKYFSLPSNH-------QSIIADAVSYTAELVQkgqKYDYIVHDVFT--GGAEPleLFTVE 436
                     5556666666666666..5789***************8766666.......44777777777776666778*********9..7777667***** PP

                     HHHHHHHTEEEEEEEEE CS
  Spermine_synth 115 ffdllkkvlkedGviil 131
                     f++ l  +lk++Gvi  
      KHJ30965.1 437 FIQDLSAILKPGGVIAI 453
                     **************975 PP

>> Methyltransf_30  S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   7.5e-06     0.027      42      87 ..     406     452 ..     391     457 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 7.5e-06
                      HHHHHC-T-EEEEEE-SS-TTTSG.GGCSHHHHHHHHHHEEEEEEEE CS
  Methyltransf_30  42 ealkeldekadawFlDgFsPaknP.elwseellkelarllkkkgtla 87 
                      ++l +  +k+d++ +D F    +P el+++e+++ l+++lk++g++a
       KHJ30965.1 406 AELVQKGQKYDYIVHDVFTGGAEPlELFTVEFIQDLSAILKPGGVIA 452
                      44555569************999989******************986 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.2e-05     0.078       4      97 .]     353     449 ..     351     449 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.2e-05
                      ET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT.TEEEEESBC....CGBSSSTTTEEEEEEESTGGG.SSHHHH..HHHHHHH CS
  Methyltransf_25   4 lGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl.nvefvqgda....edlpfedgsfDlvvssgalhh.lsdedl..ekalkei 89 
                      +G G G++  al +++   + t v+i++   + a++ ++   + n + + +da     +l ++ +++D++v   ++    ++ +l   ++++ +
       KHJ30965.1 353 VGLGIGTTPSALIEHG--INTTIVEIDPVVYDFAQKYFSL--PsNHQSIIADAvsytAELVQKGQKYDYIVH-DVFTGgAEPLELftVEFIQDL 441
                      899************5..********************54..24888888888555445668999*****99.45443233333222789**** PP

                      HHHEEEEE CS
  Methyltransf_25  90 arvLkpgG 97 
                      + +LkpgG
       KHJ30965.1 442 SAILKPGG 449
                      *******9 PP

>> Methyltransf_17  S-adenosyl-L-methionine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   3.7e-05      0.13      31     130 ..     349     451 ..     335     459 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.7e-05
                      -EEEE--TTSHHHHHHHHH--SS-EEEEESS--S-GG...G---GGGEEES-HHHHHHHHHHH-S-EE.EEEE----S-HHHHHHHHHHHHHHH CS
  Methyltransf_17  31 pvlelGLGnGRtydhlrellperriivfdralaahps...svPeeedlllGeieetlealakigakaa.lvhaDlGtgykekdavtatrlsdli 120
                        + +GLG G t + l e+  +  i+ +d ++  +++   s+P +++ ++ ++   +++l + g k   +vh  +  g +  +  t   + dl 
       KHJ30965.1 349 TAYVVGLGIGTTPSALIEHGINTTIVEIDPVVYDFAQkyfSLPSNHQSIIADAVSYTAELVQKGQKYDyIVHDVFTGGAEPLELFTVEFIQDLS 442
                      56679************************999877654559*********99999999999999998715555566666777778888888875 PP

                      GGGEEEEEEE CS
  Methyltransf_17 121 agllapgGla 130
                       ++l+pgG++
       KHJ30965.1 443 -AILKPGGVI 451
                      .689999987 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0    0.0001      0.36       3      99 .]     353     451 ..     352     451 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.0001
  Methyltransf_12   3 iGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhl...kdir.evldnirkl 92 
                      +G G G++ +al e+  +i+ t v+i+p + + a++ ++  +n++    +     ++  ++g+++D++v   +       +    e+++ + + 
       KHJ30965.1 353 VGLGIGTTPSALIEH--GINTTIVEIDPVVYDFAQKYFSLPSNHQSIIADAVSYTAELVQKGQKYDYIVHDVFTGGAeplELFTvEFIQDLSAI 444
                      799************..**************99999999999999888888888888888889*****95433333333333334889999999 PP

  Methyltransf_12  93 LkpgGrl 99 
                      LkpgG++
       KHJ30965.1 445 LKPGGVI 451
                      9999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (590 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 4389.51
//
Query:       KHJ30966.1  [L=417]
Description: putative family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
          7    6.5   8.4       0.14   12.0   1.0    2.0  2  COX2-transmemb  Cytochrome C oxidase subunit II, transmembran


Domain annotation for each model (and alignments):
>> COX2-transmemb  Cytochrome C oxidase subunit II, transmembrane
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.0   7.6e-06      0.14      15      30 ..      16      31 ..      12      34 .. 0.86
   2 ?   -4.1   1.3      0.83   1.5e+04      19      29 ..     218     227 ..     216     230 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 7.6e-06
                    HHHHHHHHHHHHHHHH CS
  COX2-transmemb 15 GWLAFsLAmLFvFiAL 30
                     W+A+s+ mLF+F+ +
      KHJ30966.1 16 SWIAYSIGMLFIFLRM 31
                    6************866 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 0.83
                     HHHHHHHHHHH CS
  COX2-transmemb  19 FsLAmLFvFiA 29 
                     Fs+  +Fv iA
      KHJ30966.1 218 FSMG-IFVIIA 227
                     5554.588887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       824  (0.0459591); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3166.89
//
Query:       KHJ30967.1  [L=111]
Description: hypothetical protein EV44_g3353 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 827.24
//
Query:       KHJ30968.1  [L=180]
Description: hypothetical protein EV44_g3978 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        0.1   12.4   0.0       0.17   11.7   0.0    1.3  1  ROQ_II    Roquin II domain


Domain annotation for each model (and alignments):
>> ROQ_II  Roquin II domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   9.5e-06      0.17       4      37 ..      16      50 ..      14      69 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 9.5e-06
      ROQ_II  4 rnYe.alRrehDaqivqvAfeaglrlspeqWSalL 37
                +nY+ ++ r  D+ i++ A+ ++l +s ++ S  L
  KHJ30968.1 16 KNYDnSFTRPADKHILKQALKQDLYISEDKPSQKL 50
                57874699*********************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1327.56
//
Query:       KHJ30969.1  [L=413]
Description: putative gtr1 g domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-69  233.8   0.1    2.2e-69  233.4   0.1    1.2  1  Gtr1_RagA  Gtr1/RagA G protein conserved region
     0.0037   16.7   0.0     0.0062   16.0   0.0    1.4  1  Arf        ADP-ribosylation factor family
  ------ inclusion threshold ------
      0.017   15.5   0.0      0.037   14.4   0.0    1.7  1  AAA_16     AAA ATPase domain
      0.035   14.3   0.0      0.079   13.2   0.0    1.7  1  Roc        Ras of Complex, Roc, domain of DAPkinase
       0.08   12.5   0.0       0.12   11.9   0.0    1.3  1  GTP_EFTU   Elongation factor Tu GTP binding domain


Domain annotation for each model (and alignments):
>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.4   0.1   6.1e-73   2.2e-69       1     232 []      58     282 ..      58     282 .. 0.97

  Alignments for each domain:
  == domain 1  score: 233.4 bits;  conditional E-value: 6.1e-73
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletlk 99 
                 ++LLmG ++sGK+s+ s++F ++ +++tl+l++t++++k+++  l+++++++wD++Gq ++++++   + + if  +g+li+V+D++ +e+ +++++l+
  KHJ30969.1  58 RLLLMGMRRSGKSSISSVVFRKMPPHETLFLESTARLQKNSM--LSFMDFQVWDFPGQINYFDRS--FDLDAIFGGIGALIWVVDAQ-DEYLDAVARLN 151
                 69*************************************998..********************7..78899***************.88********* PP

   Gtr1_RagA 100 eilealrqyspeakvfvlihKmDliqedereeifeerkeeireeiekleke..eiqffaTSiwdeslykAfssivqklipnldvleelLkklaeaieae 196
                 +++ +l+   p+++++v+ihK+D++++d ++++++++ ++i++e+++ + e  +i+f++TSi+d+s+++Afs+++qklip+l++le lL++l++++ +e
  KHJ30969.1 152 NTVLNLHSQYPHINIEVFIHKVDGLSSDYKQDVQRDIVQRIQDELSDNGIEhpNINFHLTSIYDHSIFEAFSKVIQKLIPHLSTLEALLNNLCRSSGFE 250
                 **********************************************98888889********************************************* PP

   Gtr1_RagA 197 evlLferstflviatvsskeaeekdasrfekvseii 232
                 + +Lf++ +++++at+s ++ +   + ++e++s++i
  KHJ30969.1 251 KCYLFDVLSKIYVATDS-SPMD---MLSYEICSDLI 282
                 *****************.6666...899*****987 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.7e-06    0.0062      14     134 ..      56     182 ..      48     229 .. 0.64

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.7e-06
                 EEEEEEEESTTSSHHHH....HHHHHHSSCEECSSSSSEEEEEEEETTEEEEEEEE-SSGGG..GGG.GGGGCTTESEEEEEEETT-CT.....THHHH CS
         Arf  14 elrilllGLDnaGKtTi....lkklkleelvttvPTigfnveeleiknlkftvwDvGGqekl..Rpl.WknYfektdavifvvDsadre.....Rleea 100
                 + r+ll+G+  +GK+ i      k+  +e+     T   + ++ +   ++f+vwD  Gq +   R++  +  f  + a+i+vvD++d+      Rl+++
  KHJ30969.1  56 KPRLLLMGMRRSGKSSIssvvFRKMPPHETLFLESTARLQKNS-MLSFMDFQVWDFPGQINYfdRSFdLDAIFGGIGALIWVVDAQDEYldavaRLNNT 153
                 5699**********98633225566677777778888777665.56789**********8754466534789*************99752222244444 PP

                 HHHHHHHCTSGCCTTSEEEEEEE-TTSTTSS-HH CS
         Arf 101 keeLkalleeeelkevallvlaNKqDlpealsee 134
                   +L+     ++  ++ + v+  K D  ++  ++
  KHJ30969.1 154 VLNLH-----SQYPHINIEVFIHKVDGLSSDYKQ 182
                 33333.....344455555555555544433333 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0     1e-05     0.037      21      63 ..      54      95 ..      38     233 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1e-05
      AAA_16 21 sgrpelvllsGesGvGKsslvrellralekdggiflrgkcdql 63
                sg  + +ll G++ +GKss+   ++r +  ++ +fl+ +++  
  KHJ30969.1 54 SGK-PRLLLMGMRRSGKSSISSVVFRKMPPHETLFLESTARLQ 95
                333.7899***********************999977666555 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.2e-05     0.079       2      70 ..      59     117 ..      58     175 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.2e-05
                 EEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTT CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfr 70 
                 ++l+G  ++GK+s+ + +  +k+ ++e+  +  +           +++++ ++ + +++WD+ Gq ++ 
  KHJ30969.1  59 LLLMGMRRSGKSSISSVVF-RKMPPHETLFLESTAR---------LQKNSMLSFMDFQVWDFPGQINYF 117
                 7999*********988777.5565665444433332.........22344567799*********7664 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.3e-05      0.12      93     193 ..     129     231 ..      91     286 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.3e-05
                 T-SEEEEEEETTTB....STHHHHHHHHHHHHT.TTEEEEEEESCGSTHHHHHH.HHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTBTHHHHH CS
    GTP_EFTU  93 vlDgavlvvdaveG....vepqteevlrlalke.gvpiivfiNKmDrlkaelke.iveevkqklsrkeeklekygekgekevpvvfgSalkgegvktll 185
                  +   + vvda++     v    ++vl+l +++ +++i vfi K+D l +++k+ +++++ q++   +++l++ g ++  ++++  +S ++   ++++ 
  KHJ30969.1 129 GIGALIWVVDAQDEyldaVARLNNTVLNLHSQYpHINIEVFIHKVDGLSSDYKQdVQRDIVQRI---QDELSDNGIEHP-NINFHLTSIYDHSIFEAFS 223
                 4556789*****8877778888899999888774788***********8887761445777777...666666666663.6777777777777666665 PP

                 HHHHHHSH CS
    GTP_EFTU 186 ealvellp 193
                 +++ +l+p
  KHJ30969.1 224 KVIQKLIP 231
                 55555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       743  (0.0414412); expected 358.6 (0.02)
Passed bias filter:                      607  (0.0338558); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 3080.20
//
Query:       KHJ30970.1  [L=335]
Description: putative mif domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-09   37.1   0.0    5.1e-09   36.4   0.0    1.3  1  MIF       Macrophage migration inhibitory factor (MIF)


Domain annotation for each model (and alignments):
>> MIF  Macrophage migration inhibitory factor (MIF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.0   2.9e-13   5.1e-09       2     113 ..     119     230 ..     118     231 .. 0.93

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 2.9e-13
                 EEEEEESS-GGGS-TTHHHHHHHHHHHHHTS-GGG-EEEEE-S----BTTB-SS-EEEEEEEE.SSSSHHHHHHHHHHHHHHHHHHHT--GGGEEEEEE CS
         MIF   2 mlevdtnlpkekvpaglekrltaalakalgkPedrvavevapgqalvfggstdPcavlslksi.GvvgaeqnrshskkllellakeLklskdrvlieff 99 
                 m e++tn+  +    +l + ++ al +   +Pe+ + v++     ++fgg ++P  +l ++++  +v +  nr+++ +l + + + L +s++r +i+f+
  KHJ30970.1 119 MAEIKTNVIIND-EYSLITDISYALSTRYQRPENSILVTLSHSCCVLFGGNSEPAYMLNVTALpSQVLPITNRRNAVLLAKAMEDALGVSAERGIIKFT 216
                 678999998776.5689999*****************************************994468******************************** PP

                 EE-GGG-EETTEEG CS
         MIF 100 dleaaqvgfnGstl 113
                  +   ++++nG t+
  KHJ30970.1 217 SISEDSLAYNGRTV 230
                 ***********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2708.72
//
Query:       KHJ30971.1  [L=401]
Description: putative hcp-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-05   23.4   1.0        1.3    9.4   0.0    3.7  3  TPR_12    Tetratricopeptide repeat
    0.00076   19.4   4.6        0.5   10.6   0.0    5.5  8  TPR_2     Tetratricopeptide repeat
     0.0053   16.9   0.4       0.51   10.7   0.0    4.2  5  TPR_8     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.014   16.0   0.3         11    6.8   0.0    2.8  3  TPR_16    Tetratricopeptide repeat
       0.48   11.2  11.0         31    5.4   0.0    5.4  6  Sel1      Sel1 repeat


Domain annotation for each model (and alignments):
>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.0   0.2    0.0085        30      22      71 ..     178     225 ..     175     225 .. 0.77
   2 !    5.2   0.0    0.0073        26      45      71 ..     239     265 ..     236     267 .. 0.86
   3 !    9.4   0.0   0.00036       1.3      46      71 ..     346     371 ..     327     374 .. 0.67

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0085
      TPR_12  22 Alellekaleiarrl.lGpdhpltattlrnLgrlyral.gryeeAlelleea 71 
                 A+++++++l++ ++l l++d     +++  Lg +++++     +Al++l++a
  KHJ30971.1 178 AIRNYQEVLARLEKLaLNKDQ----QAMMLLGKVLFYTnQSDSKALSWLRKA 225
                 999*********999555555....699999999855516666888888876 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0073
      TPR_12  45 attlrnLgrlyralgryeeAlelleea 71 
                  ++l   gr++++ g++  A+ ++e+a
  KHJ30971.1 239 GESLVLEGRILQKIGDLSNARIAFERA 265
                 678899999************999998 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00036
      TPR_12  46 ttlrnLgrlyralgryeeAlelleea 71 
                  ++ nL++++    ++ +A e+le+a
  KHJ30971.1 346 LSMLNLAIMCKIIQNWTQAFEWLEKA 371
                 56666666666666666666666665 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0         1   3.6e+03      20      29 ..     178     187 ..     176     191 .. 0.82
   2 ?    2.5   0.0     0.056     2e+02       3      27 ..     200     225 ..     198     225 .. 0.90
   3 !   10.6   0.0   0.00014       0.5       3      29 ..     241     267 ..     239     271 .. 0.89
   4 ?   -2.6   0.0       2.3   8.3e+03       1       9 [.     272     280 ..     272     284 .. 0.74
   5 ?   -1.6   0.0       1.2   4.2e+03       2      11 ..     303     312 ..     302     315 .. 0.81
   6 ?   -1.7   0.0       1.2   4.4e+03      13      25 ..     325     337 ..     324     340 .. 0.83
   7 ?    2.5   0.0     0.056     2e+02       6      27 ..     350     371 ..     346     374 .. 0.87
   8 ?   -3.2   0.1       3.8   1.4e+04      17      24 ..     378     385 ..     378     387 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1
       TPR_2  20 AleafekAle 29 
                 A++ ++++l+
  KHJ30971.1 178 AIRNYQEVLA 187
                 9999999997 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.056
       TPR_2   3 alynlGlayyklgdy.eeAleafekA 27 
                 a + lG+++++ ++   +Al +++kA
  KHJ30971.1 200 AMMLLGKVLFYTNQSdSKALSWLRKA 225
                 6789**********999999999998 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00014
       TPR_2   3 alynlGlayyklgdyeeAleafekAle 29 
                  l   G+++ k gd+  A+ afe+A +
  KHJ30971.1 241 SLVLEGRILQKIGDLSNARIAFERAAK 267
                 67789********************87 PP

  == domain 4  score: -2.6 bits;  conditional E-value: 2.3
       TPR_2   1 aealynlGl 9  
                 +ea+++l +
  KHJ30971.1 272 PEAYFYLSQ 280
                 588888876 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 1.2
       TPR_2   2 ealynlGlay 11 
                 ea++nlG + 
  KHJ30971.1 303 EACHNLGVIE 312
                 89*****975 PP

  == domain 6  score: -1.7 bits;  conditional E-value: 1.2
       TPR_2  13 klgdyeeAleafe 25 
                 kl d+  A+e+f 
  KHJ30971.1 325 KLEDFGMAREWFL 337
                 6899999***996 PP

  == domain 7  score: 2.5 bits;  conditional E-value: 0.056
       TPR_2   6 nlGlayyklgdyeeAleafekA 27 
                 nl+  +   +++ +A e++ekA
  KHJ30971.1 350 NLAIMCKIIQNWTQAFEWLEKA 371
                 7888888899***********9 PP

  == domain 8  score: -3.2 bits;  conditional E-value: 3.8
       TPR_2  17 yeeAleaf 24 
                 y+eA++ +
  KHJ30971.1 378 YDEAKKMW 385
                 89999866 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.63   2.3e+03       2      18 ..     199     215 ..     198     226 .. 0.65
   2 !   10.7   0.0   0.00014      0.51       2      29 ..     240     267 ..     239     268 .. 0.91
   3 ?   -1.2   0.0      0.92   3.3e+03       2      10 ..     303     311 ..     302     315 .. 0.80
   4 ?   -2.2   0.0         2   7.1e+03      13      24 ..     325     336 ..     324     337 .. 0.87
   5 ?   -0.7   0.0      0.63   2.3e+03      18      29 ..     362     373 ..     347     375 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.63
                 CHHHHHHHHHHHTT-HH CS
       TPR_8   2 eayynlgsiylklgdye 18 
                 +a+++lg++++ +++ +
  KHJ30971.1 199 QAMMLLGKVLFYTNQSD 215
                 57788998887776665 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00014
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekale 29 
                 e++++ g+i++k gd+ +A  ++e+a +
  KHJ30971.1 240 ESLVLEGRILQKIGDLSNARIAFERAAK 267
                 678889*******************965 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.92
                 CHHHHHHHH CS
       TPR_8   2 eayynlgsi 10 
                 ea++nlg i
  KHJ30971.1 303 EACHNLGVI 311
                 89*****87 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 2
                 HTT-HHHHHHHH CS
       TPR_8  13 klgdyeeAkeyy 24 
                 kl+d+ +A e++
  KHJ30971.1 325 KLEDFGMAREWF 336
                 899******998 PP

  == domain 5  score: -0.7 bits;  conditional E-value: 0.63
                 HHHHHHHHHHHH CS
       TPR_8  18 eeAkeyyekale 29 
                  +A e++eka +
  KHJ30971.1 362 TQAFEWLEKAQS 373
                 68999****976 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0     0.003        11      16      65 ..     178     228 ..     171     230 .. 0.81
   2 ?    6.1   0.1    0.0049        18       3      45 ..     245     283 ..     238     289 .. 0.74
   3 ?   -2.9   0.0       3.1   1.1e+04      36      60 ..     347     371 ..     337     375 .. 0.71

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.003
      TPR_16  16 AaaaleaalkrdpssPd..aaeAllllgdaal.rqgrlaeAaalyraalraap 65 
                 A++ ++++l+r  +  +  + +A++llg +++  ++   +A+ ++r+  +++p
  KHJ30971.1 178 AIRNYQEVLARLEKLALnkDQQAMMLLGKVLFyTNQSDSKALSWLRK--ANYP 228
                 666677777777555557799***********999***********9..7777 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0049
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaal 45 
                 ++r++ + gd   A+ a+e+a k       ++eA+++l ++  
  KHJ30971.1 245 EGRILQKIGDLSNARIAFERAAKEL-N---DPEAYFYLSQMEE 283
                 5788888888888888888887777.2...5668888877765 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 3.1
      TPR_16  36 AllllgdaalrqgrlaeAaalyraa 60 
                 ++l+l+ ++   ++++ A +++++a
  KHJ30971.1 347 SMLNLAIMCKIIQNWTQAFEWLEKA 371
                 6677777777777888888888887 PP

>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.2     0.016        57      19      33 ..     211     225 ..     199     226 .. 0.70
   2 ?   -2.3   0.0       2.4   8.6e+03      30      35 ..     262     267 ..     244     268 .. 0.77
   3 ?   -3.0   0.1         4   1.4e+04       1       9 [.     272     280 ..     272     283 .. 0.68
   4 ?   -2.8   0.1       3.4   1.2e+04      29      37 ..     292     300 ..     292     300 .. 0.86
   5 ?    4.3   0.0     0.019        68       2      37 ..     303     343 ..     302     344 .. 0.60
   6 ?    5.4   0.0    0.0087        31      24      33 ..     362     371 ..     347     371 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.016
        Sel1  19 vpkDpekAiewyekA 33 
                 + +  +kA+ w++kA
  KHJ30971.1 211 TNQSDSKALSWLRKA 225
                 556799********9 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 2.4
        Sel1  30 yekAAe 35 
                 +e+AA+
  KHJ30971.1 262 FERAAK 267
                 899997 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 4
        Sel1   1 aeAmyrLGm 9  
                 +eA++ L  
  KHJ30971.1 272 PEAYFYLSQ 280
                 678888873 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 3.4
        Sel1  29 wyekAAeqG 37 
                 ++ kAA +G
  KHJ30971.1 292 YLLKAATAG 300
                 899***887 PP

  == domain 5  score: 4.3 bits;  conditional E-value: 0.019
        Sel1   2 eAmyrLG......mfylylnGlgvpk...DpekAiewyekAAeqG 37 
                 eA+++LG      m++  +n    pk   D   A+ew+  AA  G
  KHJ30971.1 303 EACHNLGvielekMMQ--DNPN--PKkleDFGMAREWFLVAAHDG 343
                 7777777533333333..3333..333668888999999999766 PP

  == domain 6  score: 5.4 bits;  conditional E-value: 0.0087
        Sel1  24 ekAiewyekA 33 
                  +A+ew+ekA
  KHJ30971.1 362 TQAFEWLEKA 371
                 58*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       886  (0.0494171); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2933.25
//
Query:       KHJ30972.1  [L=421]
Description: putative sporulation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-11   43.7   0.3    3.4e-11   43.7   0.3    3.6  3  U3_snoRNA_assoc  U3 snoRNA associated


Domain annotation for each model (and alignments):
>> U3_snoRNA_assoc  U3 snoRNA associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   1.8      0.42   7.5e+03      27      49 ..      77     102 ..      52     129 .. 0.53
   2 !    4.3   4.5    0.0038        69      28      51 ..     223     258 ..     198     292 .. 0.59
   3 !   43.7   0.3   1.9e-15   3.4e-11       1      89 [.     324     400 ..     324     401 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.42
  U3_snoRNA_assoc  27 in...eepkkarkkkkkekllelkek 49 
                      +n   e++     ++kk+k l l+ek
       KHJ30972.1  77 VNsleENKPLVGLSSKKQKILPLREK 102
                      33444333333344444444444443 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.0038
  U3_snoRNA_assoc  28 n............eepkkarkkkkkekllelkekrp 51 
                      +               +++ k++kk+kl+++ +k++
       KHJ30972.1 223 KlvaelkikdinkALVARNSKTQKKKKLKQKLKKKK 258
                      134566666665633333444444444444433333 PP

  == domain 3  score: 43.7 bits;  conditional E-value: 1.9e-15
  U3_snoRNA_assoc   1 lLPdeilealeeredeeeaeeekskhineepkkarkkkkkekllelkekrpkdvkkGpvsvrVlkssnssklaPkaekkirnskekwLk 89 
                      lLP e+le+ +e   + +     +++i++++k   k  kk  +    ek+ kd+++G +++rVlks+++ +laP+a+  +r+ ke wL+
       KHJ30972.1 324 LLPMEYLEDNDE---TLQ-----ATNIRSKSKPPTKLGKKILF---NEKQVKDRRVGNTTYRVLKSNSQ-SLAPRASYDARRIKEMWLQ 400
                      689999933333...222.....23455666666677777766...689****************8877.******************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2533  (0.141279); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.30s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 2810.23
//
Query:       KHJ30973.1  [L=629]
Description: putative sorting nexin-41 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.9e-17   62.3   0.0      1e-16   60.9   0.0    1.7  1  PX              PX domain
    7.8e-10   38.7   8.0    4.3e-05   23.2   2.9    2.2  2  Vps5            Vps5 C terminal like
     0.0097   16.2   4.7      0.014   15.8   0.1    3.1  3  ATP-synt_E      ATP synthase E chain
  ------ inclusion threshold ------
       0.02   14.4   0.1      0.038   13.5   0.1    1.4  1  BAR_3_WASP_bdg  WASP-binding domain of Sorting nexin protein
      0.086   12.9   5.7       0.14   12.2   5.7    1.3  1  DUF4779         Domain of unknown function (DUF4779)


Domain annotation for each model (and alignments):
>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.9   0.0   2.8e-20     1e-16       8     112 ..     101     207 ..      97     208 .. 0.95

  Alignments for each domain:
  == domain 1  score: 60.9 bits;  conditional E-value: 2.8e-20
                 EEEEEEETTSSEEEEEEEEEETTSSSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSS......CTTSHHHHHHHHHHHHHHHHHHHTSCHH CS
          PX   8 vleretsgskkhsyylyevelktgakewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsv......rkkdeefiekrrkgLeeyLqrllnhpel 100
                 ++++ +s +  ++y++y++++++     +v+RrYs+F +L++ + r +p++++Pp+P+k+++  +       ++d+++i+ r+++L ++L+r+  +  +
  KHJ30973.1 101 IVDAGKSLETGSKYIVYTIRTGDL----EVRRRYSEFASLRDAISRLHPTLVVPPIPEKHTMADYaanptqARQDQQIIDLRKRMLAVFLNRCRLMDAI 195
                 78888999999***********96....**********************************989******99************************** PP

                 HHSHHHHHHHHS CS
          PX 101 rnsevlteFLev 112
                 rn+ v  +FL++
  KHJ30973.1 196 RNDGVWWRFLDP 207
                 **********87 PP

>> Vps5  Vps5 C terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.2     4e-07    0.0014      18     165 ..     299     446 ..     288     453 .. 0.89
   2 !   23.2   2.9   1.2e-08   4.3e-05     161     232 ..     547     618 ..     542     622 .. 0.93

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 4e-07
        Vps5  18 kfeEqDewFedkkqeldslesqLkk.LykaiellvsqrkelasataelakslesLaslelskslsralsqlaeveerikellerqaeqdvltLgetide 115
                 + +E D++F++ ++   +le  L   L+k      ++ + l+   ael++  + +a +e s+sl++a++++ +   +    +e+ + +    ++e ++e
  KHJ30973.1 299 SETELDPYFINFESASKDLELLLTGpLEKINRRTLNHLSSLSLDFAELGARFNGFALSESSNSLASAIERFGQAIDTSYLATEELSSSLGASFAEPMRE 397
                 557889999999999999999998647777778889999************************************************************ PP

        Vps5 116 ylrligsvksvfeqRvklwqkwqsaeqelskkkeqleKlekaaksqqdkl 165
                    + g v+ ++  Rv    + + +++el+kk++ l+ lek+ + + +++
  KHJ30973.1 398 SALFAGVVRGLLRYRVLKRVQQEMINDELAKKRTLLDSLEKS-EIEAKRI 446
                 ****************99999999**********99988887.3334555 PP

  == domain 2  score: 23.2 bits;  conditional E-value: 1.2e-08
        Vps5 161 qqdklqqlkkeveelerkvqeaekeFeeisetikkElerFetervedfknvvekyLesaiesqkevielWet 232
                 ++d + + k+++ +le+  + ae++ ++ s  i k+l+rF+ e+ +d+++ +  y +s+ie  k+ +e We+
  KHJ30973.1 547 RRDLIGKTKESISQLEQAQKVAEQDVKDASFGILKDLNRFQAEKEDDLRRYMLSYAKSQIEWGKKNLETWEE 618
                 5677889999*************************************************************8 PP

>> ATP-synt_E  ATP synthase E chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.1      0.31   1.1e+03      30      64 ..      43      74 ..      40     107 .. 0.64
   2 !   15.8   0.1   3.8e-06     0.014      14      65 ..     396     447 ..     390     480 .. 0.82
   3 ?   -1.0   0.1      0.64   2.3e+03      37      55 ..     553     571 ..     545     577 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.31
  ATP-synt_E 30 rslkseekkeekereleaqekliekakaayakkkq 64
                +slk   ++  +++ +   e++ e+++++++k+k 
  KHJ30973.1 43 SSLK---DRPGNKNSYSDSESEGENEEEEEKKNKL 74
                5555...5555555555555555555555555443 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 3.8e-06
  ATP-synt_E  14 RysaLalGvvyGakrqrslkseekkeekereleaqekliek.akaayakkkqa 65 
                 R saL +Gvv G  r+r lk   ++e  + el++++ l+ + +k + ++k+ +
  KHJ30973.1 396 RESALFAGVVRGLLRYRVLK-RVQQEMINDELAKKRTLLDSlEKSEIEAKRIE 447
                 77******************.88899999999999999987355666665544 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.64
  ATP-synt_E  37 kkeekereleaqeklieka 55 
                 k +e +++le+ +k+ e+ 
  KHJ30973.1 553 KTKESISQLEQAQKVAEQD 571
                 7788888888888888875 PP

>> BAR_3_WASP_bdg  WASP-binding domain of Sorting nexin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   1.1e-05     0.038     159     222 ..     553     610 ..     535     622 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.1e-05
  BAR_3_WASP_bdg 159 kvkesdklveegklsseekeklkkrvsvisyallaeinhfhserieDfksvmqlyLkqqvkfyq 222
                     k kes      ++l++ +++  ++ v+  s+ +l ++n f++e+  D+++ m +y k q+++ +
      KHJ30973.1 553 KTKES-----ISQLEQ-AQKVAEQDVKDASFGILKDLNRFQAEKEDDLRRYMLSYAKSQIEWGK 610
                     55555.....233333.334557889999*******************************9755 PP

>> DUF4779  Domain of unknown function (DUF4779)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   5.7   3.9e-05      0.14      18      83 ..      16      81 ..       3      85 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.9e-05
     DUF4779 18 ekgekgykkkhefdkgekghhdkedhkkkykeeggkkkkhhdedgyygehheeekgekgakfeekk 83
                + +   y+++h fd ++  + ++e h++  k+  g+k++++d++++ ++++eeek+ k    ++k+
  KHJ30973.1 16 QSEVTAYNTQHVFDRSSSPSIGDEIHESSLKDRPGNKNSYSDSESEGENEEEEEKKNKLLLPKKKG 81
                556778****************************************99999999999866555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (629 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       994  (0.0554409); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4289.56
//
Query:       KHJ30974.1  [L=536]
Description: putative high-affinity glucose transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     1e-120  403.7  21.0   1.2e-120  403.5  21.0    1.0  1  Sugar_tr  Sugar (and other) transporter
    4.2e-24   85.1  20.8    4.2e-24   85.1  20.8    1.8  2  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  403.5  21.0  1.3e-124  1.2e-120       3     452 .]      23     491 ..      21     491 .. 0.92

  Alignments for each domain:
  == domain 1  score: 403.5 bits;  conditional E-value: 1.3e-124
                 HHHHHHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH.........HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH- CS
    Sugar_tr   3 lvaalggllfgYdtgvigafltllkfaknfglsksksskee......ssvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaa 95 
                 +++a+gg+l+gYdtg i+++l++  f  +f   +++ ++        +s++ +livsi+++G ++G+l+a  ++dr+GR++sl++++ +f+ g +lq +
  KHJ30974.1  23 FFVATGGVLYGYDTGNISGILAMRYFKDQFSTGHKSIQD-GvlqpdiTSSQESLIVSILSAGTFLGALLAAQIADRIGRRWSLIASSWVFISGVILQTI 120
                 67899******************9966666655555444.459******************************************************** PP

                 TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS--- CS
    Sugar_tr  96 akgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllflPES 194
                 a+   ++ ++i+gR+++G gvGl+s+l+P+y+sE Apk +Rg +v+ yq+ait+G lvaa+++ + ++ +++  +ri++g+q+++ l+l+i++l lPE+
  KHJ30974.1 121 AT---ALPMFIAGRFFAGSGVGLISALIPLYQSETAPKWIRGVVVGSYQFAITVGLLVAAVVDNACKDRNDSGSYRIPVGVQFIWVLTLMIGMLILPET 216
                 **...9************************************************************999999*************************** PP

                 HHHHHHTT-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH.........HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THH CS
    Sugar_tr 195 Prylvekgkeeeakevlaklrgeedadrelaeekdsleaeqeee....kaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsks 289
                 Prylv  g++eea +v+ak+r  + ++ ++ e  d++ ++  ee    ka+++  ++  ++ +rll+g++lq +qql+Gin+i+yy+++ fen g++++
  KHJ30974.1 217 PRYLVRSGNTEEAAKVIAKIRRLSIDHFAVREDLDEISKKYVEElslgKATYSDCIKG-GMAKRLLTGCLLQGLQQLSGINFIFYYGTKYFENSGITDP 314
                 ********************99976666666666666666555555667777777666.699************************************* PP

                 HHHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH....HHHHTTSS..........CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHS CS
    Sugar_tr 290 llvtiivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilg..ivalllvaks.......kaasivaivfialfialfalgwgpvpwvlvsElf 379
                 +++t+i+++vn  ++  +++ +d+fGRR+lll+Ga+gm++  ++++  + +  +++++          + ++i+fi+l+i++f+++wgp+ wv+  E+f
  KHJ30974.1 315 YVITLITSTVNLCSSPPGLYAIDKFGRRPLLLWGAIGMCVSQFLVAilGTTTTGQTADgvvfatnITGQKASIAFICLYIFFFSTTWGPIAWVVTGEIF 413
                 *******************************************9996555555555559999987778899**************************** PP

                 HTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH.....T-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGGT CS
    Sugar_tr 380 pqsvRskalaiavavnwlanflisllfpiiteaig.....ggyvflvfaglavlfiifvfffvpetkgrtleeieelf 452
                 p++vR+kal+i++a+nwl n +i++ +p++++  +     + ++f+++ g+++l++ifv+f ++etkg+tle+i++++
  KHJ30974.1 414 PLRVRAKALSITTATNWLLNWAIAYSTPYLVNYGSgnlnlQSKIFFIWFGCCCLSVIFVWFLIYETKGLTLEQIDTMY 491
                 *******************************99999999999*********************************996 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.1  20.8   4.7e-28   4.2e-24       2     350 ..      26     435 ..      25     438 .. 0.79
   2 !   12.8  16.8   4.7e-06     0.042      31     176 ..     310     480 ..     280     506 .. 0.65

  Alignments for each domain:
  == domain 1  score: 85.1 bits;  conditional E-value: 4.7e-28
       MFS_1   2 llaaflsalarsilgpalpl.alaedlg..............ispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllll.fass 84 
                 + +++l++++ ++++ +l + + ++++               i+ s+ +l++++ ++g+++++l+++ ++dr+Grr+ l+++  +f++g ++l  +a+ 
  KHJ30974.1  26 ATGGVLYGYDTGNISGILAMrYFKDQFStghksiqdgvlqpdITSSQESLIVSILSAGTFLGALLAAQIADRIGRRWSLIASSWVFISG-VILQtIATA 123
                 5688999*******************9999************99*********************************************.777656577 PP

       MFS_1  85 lwlllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg...Wravfyilaivsllafvlfllllpeepperk 180
                 l++++++r+++G g g++ +++  + ++ +pk  rg ++g ++ ++ +G ++++++  ++ +      +r +  +  i  l +++ ++l lpe+p+   
  KHJ30974.1 124 LPMFIAGRFFAGSGVGLISALIPLYQSETAPKWIRGVVVGSYQFAITVGLLVAAVVDNACKDRNDsgsYRIPVGVQFIWVLTLMI-GMLILPETPRYLV 221
                 88*********************************************************96544434499999999998888877.5699999999999 PP

       MFS_1 181 rkspkeee...............................kgtgpaplvp.....awkallkdpvlwillialllf....ffgfsglltllplylqevlg 239
                 r+  +ee                                      +l +      +k   +++    ll+++ll       g+++++++ + y  e  g
  KHJ30974.1 222 RSGNTEEAakviakirrlsidhfavredldeiskkyveeL-----SLGKatysdCIKGGMAKR----LLTGCLLQglqqLSGINFIFYYGTKY-FENSG 310
                 9999999788888888877777777776666655332222.....222243333444444444....55555555222244555577777777.77777 PP

       MFS_1 240 lsglllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavt................ssavllll......vlvliGfglgf 316
                 ++   ++     +++ v++++++ + + +d++grr+ ll++ +++ ++ +++a+l++t                              +++ i f++ +
  KHJ30974.1 311 IT-DPYVI--TLITSTVNLCSSPPGLYAIDKFGRRPLLLWGAIGMCVSQFLVAILGTTttgqtadgvvfatnitG------QkasiafICLYIFFFSTT 400
                 77.35555..889*********************************************99877666665555542......044431134445556666 PP

       MFS_1 317 vfpsllalasdlappeeagtasglfn.tagslgga 350
                   p++++++ + +p + +++a+++++ t + l +a
  KHJ30974.1 401 WGPIAWVVTGEIFPLRVRAKALSITTaTNWLLNWA 435
                 6999********************99555556555 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 4.7e-06
       MFS_1  31 pseigllltl.yalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllf....ass..............lwlllvlrvlqGlgagalf.pagaa 108
                 + +   ++tl  + + + +s+p+ + +d+fGrr++ll+g+++++++ +l++++    + +                + +++ +l  ++ ++ + p++ +
  KHJ30974.1 310 GITDPYVITLiTSTVNLCSSPPGLYAIDKFGRRPLLLWGAIGMCVSqFLVAILgtttT-GqtadgvvfatnitgQKASIAFICLYIFFFSTTWgPIAWV 407
                 4444444444366677899999999999999999999999999999555555654440.1334444433333332236777777666666665366678 PP

       MFS_1 109 liadwfpkeergraigllsagfslGailgpllggllasslg.....Wravfyilaivsllafvlfllllpeep 176
                 ++ ++fp + r++a+++ +a++ l     +   ++l+ +++      + +f+i  + ++l+++++++l++e++
  KHJ30974.1 408 VTGEIFPLRVRAKALSITTATNWLLNWAIAYSTPYLVNYGSgnlnlQSKIFFIWFGCCCLSVIFVWFLIYETK 480
                 8899999999999999999998888866667777777455577777555677777777777666555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       819  (0.0456802); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 3830.29
//
Query:       KHJ30975.1  [L=87]
Description: hypothetical protein EV44_g3341 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.019   15.0   0.3      0.022   14.8   0.3    1.2  1  APAF1_C   APAF-1 helical domain


Domain annotation for each model (and alignments):
>> APAF1_C  APAF-1 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.3   1.2e-06     0.022      23      76 ..      24      74 ..       9      86 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.2e-06
     APAF1_C 23 kldkddlywysyleyHlakanlveelkallldldwieakvkltgpsslledyvk 76
                 +d+++ y + + ++H++++  + +l+++ +dl +++a + + +   l+ +y +
  KHJ30975.1 24 VKDPQQQYEFLFTISHIEDSWVTAKLTSIETDLYHVKATLDIPC---LIGEYRH 74
                4567788888889************************9998877...4555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 653.27
//
Query:       KHJ30976.1  [L=474]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       607  (0.0338558); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 3666.17
//
Query:       KHJ30977.1  [L=315]
Description: hypothetical protein EV44_g3253 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.36
# Mc/sec: 2593.76
//
Query:       KHJ30978.1  [L=372]
Description: putative deoxyhypusine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     1e-130  435.2   0.0   1.2e-130  435.0   0.0    1.0  1  DS        Deoxyhypusine synthase


Domain annotation for each model (and alignments):
>> DS  Deoxyhypusine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  435.0   0.0  6.6e-135  1.2e-130       1     288 []      48     350 ..      48     350 .. 0.99

  Alignments for each domain:
  == domain 1  score: 435.0 bits;  conditional E-value: 6.6e-135
          DS   1 ellesyekigfqatslgeaidilnkm.......rkdekctiflgltsnlissGlreiiadlvkeklvdvivtTaggieeDlikalgkktylgdfeldde 92 
                 +l++ ++++gfqa+s+ +a++i+n+m       ++d++ tiflg+tsnlissGlr++i++l+++  + +ivtTaggieeDlik+l++ ty+g+f+l+++
  KHJ30978.1  48 QLVSGMANMGFQASSIVDAVRIINDMrewrdplNSDNRSTIFLGYTSNLISSGLRGTIRYLAQHSQIAAIVTTAGGIEEDLIKCLSP-TYVGSFHLNGA 145
                 599*****************************9999***************************************************.*********** PP

          DS  93 eLrekginRignllvpnenyckfedwvreildkleeeqk.........vwspselikelGkeindeeSilywAykndipvfcpaltDgslGdqlllfhs 182
                 +Lr++g+nRignl+vpn+nyc fedwv++ildkl++eq+         +w+ps++ik+lGkein+e+S+lyw+ykn+ipvfcpaltDgslGd +l+fh+
  KHJ30978.1 146 KLRSQGLNRIGNLIVPNNNYCLFEDWVQPILDKLLKEQEeskmkdkpiNWTPSKIIKRLGKEINNEDSVLYWCYKNNIPVFCPALTDGSLGD-MLYFHT 243
                 *************************************9999******99*******************************************.****** PP

          DS 183 vk.ekkklkldivkDirelndialkakktgaiilGGGvpKhhilnanlmrngadyavyittaqefdGslsgatldEavSwgkikaeaksvkvyaDaTiv 280
                 ++ ++ +l++div+Dir++n+ia++a ++g+iilGGG++Khhi+na+lmrnga+ avyi+taqefdGs++ga++dEavSwgkik +a+ vkvyaDaTi+
  KHJ30978.1 244 FRsSPLQLRIDIVEDIRAINTIAVRAARVGMIILGGGIVKHHIANACLMRNGAESAVYINTAQEFDGSDAGARPDEAVSWGKIKIGADAVKVYADATIC 342
                 *99************************************************************************************************ PP

          DS 281 lPLlvaat 288
                 +PL+vaat
  KHJ30978.1 343 FPLIVAAT 350
                 *****986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.37
# Mc/sec: 2977.12
//
Query:       KHJ30979.1  [L=391]
Description: putative replication factor c subunit 3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      5e-17   62.6   0.0    9.5e-17   61.7   0.0    1.5  1  AAA              ATPase family associated with various cellul
    6.5e-17   61.7   0.0    2.2e-16   60.0   0.0    2.0  1  Rep_fac_C        Replication factor C C-terminal domain
    8.3e-15   54.9   0.1    2.3e-14   53.5   0.1    1.8  1  DNA_pol3_delta2  DNA polymerase III, delta subunit
      2e-09   37.6   0.0    3.4e-09   36.9   0.0    1.4  1  Rad17            Rad17 P-loop domain
    7.3e-08   32.6   0.0      2e-07   31.2   0.0    1.7  1  AAA_assoc_2      AAA C-terminal domain
    1.1e-06   28.7   0.5    0.00011   22.1   0.0    2.4  2  AAA_11           AAA domain
    1.8e-06   27.8   0.0    6.7e-06   25.9   0.0    1.9  2  AAA_30           AAA domain
    7.7e-06   26.4   0.0    3.7e-05   24.2   0.0    2.1  1  AAA_16           AAA ATPase domain
      1e-05   25.8   0.0    4.2e-05   23.8   0.0    2.0  1  AAA_22           AAA domain
    2.9e-05   23.9   0.0    5.3e-05   23.0   0.0    1.3  1  AAA_24           AAA domain
    3.9e-05   23.5   0.3    9.3e-05   22.3   0.1    1.6  2  DNA_pol3_delta   DNA polymerase III, delta subunit
    0.00012   21.9   0.0    0.00061   19.6   0.0    2.1  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    0.00022   20.4   0.0    0.00039   19.6   0.0    1.3  1  DUF815           Protein of unknown function (DUF815)
    0.00028   21.2   0.2     0.0019   18.5   0.0    2.4  2  AAA_19           AAA domain
    0.00046   20.2   0.1     0.0022   18.0   0.0    2.2  1  AAA_5            AAA domain (dynein-related subfamily)
     0.0012   18.9   0.0      0.062   13.3   0.0    2.3  2  ResIII           Type III restriction enzyme, res subunit
     0.0016   18.3   0.1      0.006   16.5   0.1    2.0  1  AAA_3            ATPase family associated with various cellul
     0.0019   17.7   0.3       0.51    9.8   0.0    2.3  2  PhoH             PhoH-like protein
     0.0025   17.9   0.0     0.0048   16.9   0.0    1.4  1  AAA_14           AAA domain
     0.0032   17.2   0.3       0.02   14.7   0.1    2.1  2  DEAD             DEAD/DEAH box helicase
  ------ inclusion threshold ------
      0.012   15.1   0.0      0.036   13.6   0.0    1.8  1  AAA_7            P-loop containing dynein motor region
      0.014   16.0   0.0      0.028   15.0   0.0    1.6  1  AAA_18           AAA domain
      0.019   14.2   0.1      0.053   12.7   0.1    1.6  1  PIF1             PIF1-like helicase
      0.021   14.1   0.0      0.033   13.4   0.0    1.2  1  DUF2075          Uncharacterized conserved protein (DUF2075)
      0.024   15.0   0.1       0.06   13.8   0.1    1.7  1  RNA_helicase     RNA helicase
      0.028   13.8   0.0       0.19   11.1   0.0    2.1  1  TniB             Bacterial TniB protein
      0.035   13.5   0.1       0.44    9.9   0.1    2.5  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.038   14.2   0.0      0.064   13.5   0.0    1.5  1  AAA_28           AAA domain
      0.045   14.3   0.0        0.1   13.1   0.0    1.7  1  ABC_tran         ABC transporter
       0.12   12.3   0.0       0.25   11.3   0.0    1.5  1  NACHT            NACHT domain
       0.14   11.7   0.0       0.42   10.1   0.0    1.8  1  AAA_25           AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.7   0.0   1.6e-19   9.5e-17       1     130 [.      76     206 ..      76     208 .. 0.78

  Alignments for each domain:
  == domain 1  score: 61.7 bits;  conditional E-value: 1.6e-19
                 EEEESSTTSSHHHHHHHHHHHH......THEEEEEETTTCS.SS...STTHHHHHHHHHHHHHHHTS......TSEEEEEETGGGHHHHHTTCCCHHHH CS
         AAA   1 vllyGppGtGKTllakavakel......gvefleisgsell.sk...yvgesekkirelfkeakeka......kpsilfiDEidalaksrsgseseeee 83 
                 +l+yGppGtGKT+++ a+a+++       + +le+++s+ +  +    + ++ ++++++f+ +  ++      + + +++DE+da++++          
  KHJ30979.1  76 LLFYGPPGTGKTSTILALARQIygsknlRQMVLELNASDDRgIDvvrEQIKTFASTKQIFNMVPVSSsassiaSYKLIILDEADAMTSTA--------- 165
                 69*******************74333224779******9994334553333444556666665333345679555***********9999......... PP

                 HHHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHHHSTTSSEEEET CS
         AAA  84 rvvnqLlteldgvkkkeskvivigatnrpdkldpallrgRfdrkiei 130
                   + +L + ++++++   ++ +++++n+ +kl+pall +R++r  + 
  KHJ30979.1 166 --QMALRRIMEKFTS---NTRFCIIANYAHKLSPALL-SRCTRFRFS 206
                 ..*************...589****************.999987665 PP

>> Rep_fac_C  Replication factor C C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   0.0   3.8e-19   2.2e-16       1      86 [.     291     376 ..     291     378 .. 0.97

  Alignments for each domain:
  == domain 1  score: 60.0 bits;  conditional E-value: 3.8e-19
                 --HHHHHHHHHHHHH.T-HHHHHHHHHHHHHHC---HHHHHHHHHHHGCCS..S-HHHHHHHHHHHHHHHHHHHCTH-HHHHHHHHH CS
   Rep_fac_C   1 phpteieeileacln.gdfeeaykklrellvekGysaediltqlhrvvkeqeelpeaqkleilellgeiekrlveGasehlqlsall 86 
                 php++i++il+++l+ +d+  + k+++ l++ +G++++di+t l + +++  ++p  + +  ++ l+eie+rl+ G+se +q+ al+
  KHJ30979.1 291 PHPSDINKILHTLLQtSDVLSCLKTINLLKTLHGLALADIITSLSEELMKL-DVPPTVMITWIDGLAEIEYRLSGGGSEVIQTGALV 376
                 8************99************999999*****************6.7********************************98 PP

>> DNA_pol3_delta2  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.5   0.1   3.9e-17   2.3e-14       2     162 ..      57     208 ..      56     209 .. 0.88

  Alignments for each domain:
  == domain 1  score: 53.5 bits;  conditional E-value: 3.9e-17
  DNA_pol3_delta2   2 qeealkilskalksgrlahayLfeGdegigkkelalnlakallceeknetkpcgecksckkieqgkhpDvivieteekersikldqirelieel 95 
                      ++++l   sk ++++rl h +Lf+G+ g+gk ++ l+la+++  +++ ++          +++  +   + v++++ k    ++ qi ++    
       KHJ30979.1  57 HQDILATVSKFVETNRLPH-LLFYGPPGTGKTSTILALARQIYGSKNLRQ-------MVLELNASDDRGIDVVREQIK-TFASTKQIFNMVPVS 141
                      6778889999********9.8**********************9999876.......344444555555555655554.57889********** PP

  DNA_pol3_delta2  96 srkpreskkkiiiiedaekmtksAaNalLktlEEPsenaifiLitsdtnklLktirSRcqelkfspl 162
                      s  + ++++k+ii+++a+ mt+ A+ al +++E   +n+ f +i++  +kl + + SRc  ++fspl
       KHJ30979.1 142 SSASSIASYKLIILDEADAMTSTAQMALRRIMEKFTSNTRFCIIANYAHKLSPALLSRCTRFRFSPL 208
                      *****************************************************************98 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.0   5.9e-12   3.4e-09       3     116 ..      36     157 ..      34     186 .. 0.70

  Alignments for each domain:
  == domain 1  score: 36.9 bits;  conditional E-value: 5.9e-12
       Rad17   3 edenelWfekykPekaeelavhkkkieevkewlkadvLesrkkriLLisGPsGCgkstvvkvLskel.gik.lrewl...npvslkepdnqksdfkglt 96 
                 +++n +W+eky+P+++++l+ h+  +  v ++++++ L++     LL  GP+G gk+ ++  L+++  g k lr+ +   n+   +  d  ++++k+  
  KHJ30979.1  36 DEDNLPWVEKYRPDTLADLSGHQDILATVSKFVETNRLPH-----LLFYGPPGTGKTSTILALARQIyGSKnLRQMVlelNASDDRGIDVVREQIKTFA 129
                 677889********************************97.....59*************999986414331445431114444344444444445544 PP

       Rad17  97 ekesrf........lsqiesfkeleLkd 116
                  +++ f         s i+s+k + L +
  KHJ30979.1 130 STKQIFnmvpvsssASSIASYKLIILDE 157
                 4444445555555556666666555554 PP

>> AAA_assoc_2  AAA C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.0   3.4e-10     2e-07       3      57 ..     224     290 ..     222     297 .. 0.88

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 3.4e-10
                  X.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.............XXXXXXXXXXXXXXXXX CS
  AAA_assoc_2   3 kklkleddalealaeladGDaRkaLnlLElaaeaaeak............egkieitledleealqr 57 
                  +++k+++da eal++l++GD+R+aLn+L+++ ++++              +++ +it+ ++ e++ +
   KHJ30979.1 224 EDVKINSDATEALIKLSKGDMRRALNVLQACHASSKPLssggtlqtasidQERDTITETTIYECIAS 290
                  6799*************************99999887789999999999888888999999888865 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   1.9e-07   0.00011      18      55 ..      72     105 ..      58     144 .. 0.65
   2 ?    4.2   0.2     0.054        31     186     223 ..     148     185 ..     140     193 .. 0.89

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 1.9e-07
      AAA_11  18 e..itliqGPPGtgKTktivellsqllsrrkseeeksakp 55 
                      l+ GPPGtgKT+ti++l +q++       +k+  +
  KHJ30979.1  72 RlpHLLFYGPPGTGKTSTILALARQIYG------SKNLRQ 105
                 4445799*******************41......222222 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.054
      AAA_11 186 esleeevldeaeivltTlsgagsklleklakkfdvviI 223
                 +s++  +ldea+   +T + a ++ +ek++ + + +iI
  KHJ30979.1 148 ASYKLIILDEADAMTSTAQMALRRIMEKFTSNTRFCII 185
                 5566679******************************9 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   1.2e-08   6.7e-06      22     106 ..      77     168 ..      57     186 .. 0.72
   2 ?   -1.3   0.0       2.6   1.5e+03     161     182 ..     231     252 ..     208     274 .. 0.72

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 1.2e-08
      AAA_30  22 vltGpAGtGKttalkal.reaweaag...grviglAptgkaAkvLaeelgieastiakllkrlk...grarlepgtllivDEa.gmvdtkqla 106
                 +  Gp+GtGKt ++ al r+++ +++   + + + A+  +  +v++e++ + ast + +        ++ ++++ +l+i DEa +m++t+q+a
  KHJ30979.1  77 LFYGPPGTGKTSTILALaRQIYGSKNlrqMVLELNASDDRGIDVVREQIKTFASTKQIFN-MVPvssSASSIASYKLIILDEAdAMTSTAQMA 168
                 567*******97766664999998865433344789************998666655443.22245576788899********5577887774 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 2.6
      AAA_30 161 eeraaalalregdaeealeala 182
                 +  +a  +l++gd+++al+ l+
  KHJ30979.1 231 DATEALIKLSKGDMRRALNVLQ 252
                 4455666666666666665554 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   6.4e-08   3.7e-05      12     106 ..      61     159 ..      55     217 .. 0.64

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 6.4e-08
      AAA_16  12 LlsalervrsgrpelvllsGesGvGKsslvrellralekd...ggiflrgkcdqlesaipysalaqalareellrqllde....aesaeleawreklee 103
                 L+++ + v ++r + +l++G++G+GK+s + +l+r++ ++   +  +l+ ++ +  ++   +++ +++++    +q+ ++    +++++ + ++  +++
  KHJ30979.1  61 LATVSKFVETNRLPHLLFYGPPGTGKTSTILALARQIYGSknlRQMVLELNASDD-RG--IDVVREQIKTFASTKQIFNMvpvsSSASSIASYKLIILD 156
                 4555557888999**********************99999777444455555554.22..233666666666666666666555444455555555555 PP

      AAA_16 104 ala 106
                 ++ 
  KHJ30979.1 157 EAD 159
                 444 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   7.2e-08   4.2e-05       7     123 ..      75     180 ..      71     196 .. 0.71

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 7.2e-08
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalrarav..ielliiDEaqhl 103
                 +l+ +G++GtGKT ++  l++q       ++ r  v++ +++ + + + +++++  +          s++++++++   ++a +    +l+i+DEa+ +
  KHJ30979.1  75 HLLFYGPPGTGKTSTILALARQIY---GSKNLRQMVLELNASDDRGIDVVREQIKTFA---------STKQIFNMVPVSSSASSIasYKLIILDEADAM 161
                 7899******************83...2333455555555555555555555554444.........5788888888888888888899********** PP

      AAA_22 104 rseealeeLrsllnlsrkgv 123
                  + +a   Lr++++  ++++
  KHJ30979.1 162 -TSTAQMALRRIMEKFTSNT 180
                 .7777777777766533333 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   9.2e-08   5.3e-05       5      95 ..      76     179 ..      74     189 .. 0.84

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 9.2e-08
      AAA_24   5 iliyGpsgiGKTtlakel........gpkplfidtekGlksldadkfpdieswedfldevvel.....aaeladyktlviDtideleelclaevirqne 90 
                 +l yGp+g+GKT++++ l          +  ++ ++++ ++  +   ++i++++  ++ ++ +     a   a yk +++D +d + + +   ++r  e
  KHJ30979.1  76 LLFYGPPGTGKTSTILALarqiygskNLRQMVLELNASDDRGIDVVREQIKTFASTKQIFNMVpvsssASSIASYKLIILDEADAMTSTAQMALRRIME 174
                 678***************999998876677788888877765555558899999999999999*****9*****************9999988888888 PP

      AAA_24  91 kaesk 95 
                 k++s+
  KHJ30979.1 175 KFTSN 179
                 77766 PP

>> DNA_pol3_delta  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.1   1.6e-07   9.3e-05      56     170 ..     148     252 ..     136     253 .. 0.89
   2 ?   -2.6   0.0       7.2   4.2e+03      99     125 ..     289     314 ..     278     334 .. 0.75

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 1.6e-07
                     SSEEEEEEE--.....TT-S-TTHHHHHHHHTTT--SSEEEEEEES.S--HHHHHHHHHTTTEEEEEE----TTTHHHHHHHHHHHTT-EE-HHH CS
  DNA_pol3_delta  56 sdkrivvlknpklltkesklnekllkeLeeylsnlpedtlLiliapkklderkklvklLkkkatvveaktlkeeelkkwiqkraqelglkiekea 150
                     ++ ++++l+ +      +  +   + +L +++++   +t +++ia+     + kl   L ++ t +++++lke++++  ++k++ e+ +ki  +a
      KHJ30979.1 148 ASYKLIILDEA------DAMTSTAQMALRRIMEKFTSNTRFCIIAN----YAHKLSPALLSRCTRFRFSPLKEQDIRVLVDKVIVEEDVKINSDA 232
                     56788888888......446777788999999999999********....678888889999999****************************** PP

                     HHHHHHHHTT-HHHHHHHHH CS
  DNA_pol3_delta 151 lelLlelvennlsaikqele 170
                     +e L++l+ ++++++ + l+
      KHJ30979.1 233 TEALIKLSKGDMRRALNVLQ 252
                     ************99988775 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 7.2
                     EES.S--HHHHHHHHHTTTEEEEEE-- CS
  DNA_pol3_delta  99 iapkklderkklvklLkkkatvveakt 125
                      +p + ++ +k++ +L +++ v+++ +
      KHJ30979.1 289 ASP-HPSDINKILHTLLQTSDVLSCLK 314
                     555.66666777788888888777754 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0     1e-06   0.00061       2      57 ..      47      97 ..      46     108 .. 0.87
   2 ?   -1.4   0.0         3   1.7e+03      79     112 ..     144     177 ..     123     182 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 1e-06
      RuvB_N  2 rPksleeyigqekvkeklkifieaakkreealdhvllyGpPGlGkttlakiiakel 57
                rP++l++  g +++ ++++ f+e+       l h+l+yGpPG Gkt+    +a+++
  KHJ30979.1 47 RPDTLADLSGHQDILATVSKFVETN-----RLPHLLFYGPPGTGKTSTILALARQI 97
                9999*********999999999875.....589*************9888888765 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 3
      RuvB_N  79 ltnleekdvlfideihrlsraveevlysamedfr 112
                  +++ + +++ +de   ++++++  l   me f+
  KHJ30979.1 144 ASSIASYKLIILDEADAMTSTAQMALRRIMEKFT 177
                 5677888899999999999999999999999885 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   6.8e-07   0.00039      28     104 ..      49     127 ..      27     138 .. 0.74

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 6.8e-07
      DUF815  28 ddLvgidkqkealventeqfleglpannvLLwGarGtGKSslvkallneyaeeg.Lr..lievekedlkelpklvellre 104
                 d+L ++   ++++++ +++f+e ++  ++L++G  GtGK s++ al +++  ++ Lr  ++e++ +d + ++ + e++++
  KHJ30979.1  49 DTLADLSG-HQDILATVSKFVETNRLPHLLFYGPPGTGKTSTILALARQIYGSKnLRqmVLELNASDDRGIDVVREQIKT 127
                 44444443.356778899****************************9987655447644667777777777777777765 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   3.3e-06    0.0019      11     126 ..      74     173 ..      65     220 .. 0.75
   2 ?   -0.5   0.0       2.4   1.4e+03      69      88 ..     319     338 ..     268     363 .. 0.69

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 3.3e-06
      AAA_19  11 kvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgaeatTiHrlalldfddlltealelleeaeeekklqeeellivD 109
                 ++ll  ++pGtGKT ++ +  + +   +++    + l a   r  + +re++       +T+ +       +++ +++ +   +++ + + + +l+i D
  KHJ30979.1  74 PHLLFYGPPGTGKTSTILALARQIYGSKNLRQMVLELNASDDRGIDVVREQI-------KTFAST------KQIFNMVPV---SSSASSIASYKLIILD 156
                 578889*****************99999887666677899999999999999.......555544......222223333...2344556455588999 PP

      AAA_19 110 EfqdvdelqyrLlkall 126
                 E+  ++ +++  l++++
  KHJ30979.1 157 EADAMTSTAQMALRRIM 173
                 98888855555555554 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 2.4
      AAA_19  69 atTiHrlalldfddllteal 88 
                  +T+H+lal d+ + l+e+l
  KHJ30979.1 319 LKTLHGLALADIITSLSEEL 338
                 68999998766655553333 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   3.8e-06    0.0022       1      91 [.      75     175 ..      75     181 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 3.8e-06
                 EEEEE--SSSSHHHHHHHGGGGB......S--EEEEE--TT--HHHHH--B--..........--------...G-SEEEEESGGG--HHHHHHHHHHH CS
       AAA_5   1 dvlLvGppGtgKselaerlaaal......nreveyvqltrdtteedlkgrreik.ngttslvdsplvraar...egeilvlDEveraesevlnsLlsll 89 
                 ++l  GppGtgK++ +  la+ +      ++ v++ + ++d   + ++ ++++  + ++ +   p+  +a    + ++++lDE + + s ++++L +++
  KHJ30979.1  75 HLLFYGPPGTGKTSTILALARQIygsknlRQMVLELNASDDRGIDVVREQIKTFaSTKQIFNMVPVSSSASsiaSYKLIILDEADAMTSTAQMALRRIM 173
                 7899*******************886655555566666666666666666665455555666666666666888999********999****9999998 PP

                 HS CS
       AAA_5  90 ee 91 
                 e+
  KHJ30979.1 174 EK 175
                 85 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   0.00011     0.062      12      55 ..      60     104 ..      53     114 .. 0.77
   2 ?    3.0   0.0      0.16        93     125     162 ..     142     181 ..     113     187 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.00011
                 HHHHT.......TTSEEEEEESTTSTHHHHHHHHHHHH-S..... CS
      ResIII  12 ienlleklks.krdkrglikmaTGtGKTlvaaklierllkkgkee 55 
                 i ++++k+ + +r  ++l+  + GtGKT ++++l+++++ +++ +
  KHJ30979.1  60 ILATVSKFVEtNRLPHLLFYGPPGTGKTSTILALARQIYGSKNLR 104
                 4444445443366779*********************99987655 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.16
                 ..HHHTTT-SEEEEETGGGTTS.T..TTHHHHHT---SEE CS
      ResIII 125 seellrdrfdviiiDEaHrlgakk..swreilekfkeavl 162
                 s   +  ++++ii DEa  +++ +  + r+i+ekf ++++
  KHJ30979.1 142 SSASSIASYKLIILDEADAMTSTAqmALRRIMEKFTSNTR 181
                 45556677889*****999888645699999999988766 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1     1e-05     0.006       1      58 [.      75     132 ..      75     182 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1e-05
       AAA_3   1 hvllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkk 58 
                 h+l+ g PG++kt ++ ala+++  + +  q+  +l  sd  G++v++e+ k+f  +k
  KHJ30979.1  75 HLLFYGPPGTGKTSTILALARQIYGSKNLRQMVLELNASDDRGIDVVREQIKTFASTK 132
                 999***********************9999******************9998886544 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00088      0.51      23      56 ..      77     110 ..      61     121 .. 0.86
   2 ?    5.8   0.2     0.014       8.2     121     145 ..     151     174 ..     118     194 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00088
                 EEE--TTSSTTHHHHHHHHHHHHTTS-SEEEEEE CS
        PhoH  23 faiGpaGtGKtylavalavealkkkkvkriiltr 56 
                    Gp GtGKt   +ala +++ +k++++++l  
  KHJ30979.1  77 LFYGPPGTGKTSTILALARQIYGSKNLRQMVLEL 110
                 568*************************999865 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.014
                 EEEEE-SGGG--HHHHHHHHTTB-T CS
        PhoH 121 afvilDEAQnttkeqmkmfltRlGe 145
                 +++ilDEA  +t+ + +m l R+ e
  KHJ30979.1 151 KLIILDEADAMTS-TAQMALRRIME 174
                 78******99986.45777777743 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   8.3e-06    0.0048       6     106 ..      77     193 ..      74     212 .. 0.66

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 8.3e-06
      AAA_14   6 vitGaRrvGKTtllkqlikell...vkkesilyinldderd.....kkladpekllelileklke...........ekktylflDEiqev.pewekalk 84 
                 +  G+  +GKT  +  l+++ +     ++ +l++n  d+r      +++++++   + i+    +              ++++lDE+  + ++++ al+
  KHJ30979.1  77 LFYGPPGTGKTSTILALARQIYgskNLRQMVLELNASDDRGidvvrEQIKTFA-STKQIF----NmvpvsssassiASYKLIILDEADAMtSTAQMALR 170
                 5679999***********99998655555666666666555444331122222.112222....13334456777878899******9772568999** PP

      AAA_14  85 slvdeg.knldvivtGSnsklls 106
                 +++++  +n ++++    +  ls
  KHJ30979.1 171 RIMEKFtSNTRFCIIANYAHKLS 193
                 ****8878888888766555555 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.64   3.7e+02      18      39 ..      77      98 ..      62     109 .. 0.76
   2 !   14.7   0.1   3.4e-05      0.02      92     151 ..     119     178 ..      88     186 .. 0.61

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.64
                EEEESTTSSHHHHHHHHHHHHH CS
                xxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 18 lvaaeTGsGKTlaflipvlqiv 39
                l  ++ G+GKT   l  + qi 
  KHJ30979.1 77 LFYGPPGTGKTSTILALARQIY 98
                667899*****99777666654 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 3.4e-05
                 HHHHTTCSEEEEEHHHHHHHH..HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHH CS
                 xxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  92 skldngvdivvgtpgrlddll..stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpq 151
                 ++++++++ + +t  ++++++  s+   ++ + ++++lDEad + +   +  ++ri++++ +
  KHJ30979.1 119 DVVREQIKTFASTK-QIFNMVpvSSSASSIASYKLIILDEADAMTST-AQMALRRIMEKFTS 178
                 22223333333333.3333446665666799***************9.99999999998844 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   6.2e-05     0.036      35      71 ..      75     112 ..      61     139 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 6.2e-05
       AAA_7  35 pvllvGptGtGKtviikdllkkld.kekylsltinfsa 71 
                 ++l++Gp GtGKt++i  l +++  ++++  ++++++a
  KHJ30979.1  75 HLLFYGPPGTGKTSTILALARQIYgSKNLRQMVLELNA 112
                 799***************88887646666666666665 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   4.9e-05     0.028       3      44 ..      78     119 ..      76     177 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 4.9e-05
      AAA_18   3 ltGtpGvGKttlakeLskrlgf.gvnlrdvakenglllevdpe 44 
                   G+pG+GKt+   +L++   + + nlr+++ e + ++++  +
  KHJ30979.1  78 FYGPPGTGKTSTILALARQI-YgSKNLRQMVLELNASDDRGID 119
                 68**************9995.6899999999998877766555 PP

>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   9.1e-05     0.053       9     134 ..      60     181 ..      54     188 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 9.1e-05
                 HHHHH......HCTS-EEEEESTTSSCHHHHHHHHHHCHCTCCCEEEEESSHHHHHCC.TSEECHHHHT-TTSSS-HHHHHHHTSCCCHHHHHC-SEEE CS
        PIF1   9 vfdaiieavlnekgklfFvtGsgGtgKtflwkallkklrsegkivlavAssGvAalllegGrtahsrfkiplekdeestckikrgsklaellkktslii 107
                 ++ ++ + v +++   + ++G  GtgKt    al  ++ ++++   +v    + a   ++G+    r +i   ++ ++  ++ + s+ a+ ++  +lii
  KHJ30979.1  60 ILATVSKFVETNRLPHLLFYGPPGTGKTSTILALARQIYGSKNLRQMVLE--LNASD-DRGI-DVVREQIKTFASTKQIFNMVPVSSSASSIASYKLII 154
                 55556566665554555568999****99999999999886543333322..22222.3454.44688999999999999******************* PP

                 EECGGGSBHHHHHHHHHHHHHHCT-.. CS
        PIF1 108 wDEapmverecfealdrtlrdilkeke 134
                 +DEa  +  ++  al r++ + ++++ 
  KHJ30979.1 155 LDEADAMTSTAQMALRRIMEKFTSNTR 181
                 ******************999998865 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   5.7e-05     0.033       7     106 ..      79     167 ..      75     185 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 5.7e-05
     DUF2075   7 tGvaGtGKtvvllnllael..eddeeertavylsvNhplvlvlrealakkeekkkkkeafeklssfinnlsefkkaeekkeepkedvvivDEAhrlltk 103
                  G +GtGKt   l+l+ ++  +++ ++    +     + ++v+re+++  ++ k++ + +  +ss               +    +++i DEA  ++++
  KHJ30979.1  79 YGPPGTGKTSTILALARQIygSKNLRQMVLELNASDDRGIDVVREQIKTFASTKQIFNMVPVSSSA-------------SSIASYKLIILDEADAMTST 164
                 799****************33333333333333444566789999996666444444444443333.............34556999999999999886 PP

     DUF2075 104 sdq 106
                 +++
  KHJ30979.1 165 AQM 167
                 555 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1    0.0001      0.06       2      62 ..      77     162 ..      76     194 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 0.0001
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkkl.........................klkkkdsvysrnpeddfwdgYtgqevvvidDfgqvk 62 
                   ++yGp+g+GK++++  La+++ ++                           + ++++++   p ++  ++  + + ++ d+  +++
    KHJ30979.1  77 LFYGPPGTGKTSTILALARQIYGSKnlrqmvlelnasddrgidvvreqikTFASTKQIFNMVPVSSSASSIASYKLIILDEADAMT 162
                   79*******************97664555566666666666666665555555555555555555555555555566666555555 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00034      0.19      23      58 ..      61      96 ..      52     181 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00034
        TniB 23 LeeLleypkrkrmpnlllvGdsnnGKtmivekFarl 58
                L+ + ++ + +r p+ll++G++ +GKt+ +   ar+
  KHJ30979.1 61 LATVSKFVETNRLPHLLFYGPPGTGKTSTILALARQ 96
                6777888899*****************988766655 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00075      0.44      24      43 ..      75      94 ..      68     181 .. 0.71
   2 ?   -1.7   0.0       2.7   1.6e+03     178     193 ..     185     200 ..     175     203 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00075
  Mg_chelatase 24 nlllvGppGsGKtmlakrlp 43
                  +ll++GppG+GKt  + +l+
    KHJ30979.1 75 HLLFYGPPGTGKTSTILALA 94
                  89**********96554443 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 2.7
  Mg_chelatase 178 ierYlsklsgplldRi 193
                   i++Y +kls +ll R 
    KHJ30979.1 185 IANYAHKLSPALLSRC 200
                   789*********9995 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   0.00011     0.064       3      23 ..      77      99 ..      75     167 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 0.00011
      AAA_28  3 vitGgestGKTtlleaLaar..g 23
                 + G+++tGKT+++ aLa++  g
  KHJ30979.1 77 LFYGPPGTGKTSTILALARQiyG 99
                589***************65442 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   0.00018       0.1      14      80 ..      76     180 ..      68     264 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00018
                 EEEEESTTSSHHHHHHHHTTSS--SEE..EEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH............................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................... RF
    ABC_tran  14 vaivGenGaGKStLlkllagllkpteG..eilldgkdlkeqeleslrkeigvlpqepqlfpeltvren............................... 79 
                 + + G+ G+GK++ + +la++    +   ++ l+ + ++++ + ++r++i+++  ++q+f+ + v ++                               
  KHJ30979.1  76 LLFYGPPGTGKTSTILALARQIYGSKNlrQMVLELNASDDRGIDVVREQIKTFASTKQIFNMVPVSSSassiasykliildeadamtstaqmalrrime 174
                 5688*************9999987544226668888888899********************9998888999999999888887665543333333333 PP

                 .....H CS
                 .....x RF
    ABC_tran  80 .....e 80 
                      +
  KHJ30979.1 175 kftsnT 180
                 333330 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00043      0.25       4     162 ..      77     220 ..      75     224 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00043
                 EEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEETTTTTTS-....-HCHHHCCCCTS--SSS-CCHHHHCCSCCCEEEEEE-STT-SS-TCH.. CS
       NACHT   4 ilqGeaGsGKTtLlqklalawaegklpqgafklvFflslrelsrsgna.rsladllfsqlpepaapvsevwavllelperlLlilDglDelvtdlgqke 101
                 +  G++G GKT  +  la+++  +k  +   ++v+ l+ ++++ +  +   ++++  +  +++   v +v +   +++   L+ilD +D + +  +   
  KHJ30979.1  77 LFYGPPGTGKTSTILALARQIYGSKNLR---QMVLELNASDDRGIDVVrEQIKTF--ASTKQIFNMV-PVSSSASSIASYKLIILDEADAMTSTAQM-- 167
                 678*****************99999444...788888888888887553223332..3333333333.2567889999999***********97777.. PP

                 .......HHHHHCTTTTT--EEEEEEECCCHHHHCTTSSCE..EEEE--TCCHHHHHHHHC CS
       NACHT 102 kqpvrtlLselirkkllpeasllltvrpralrdleeqleeaivlevegfsesrrkqlvrky 162
                        L+++++k  +++++ + ++ + a +  + +l++ +++   +++e++++ lv k+
  KHJ30979.1 168 ------ALRRIMEK--FTSNTRFCIIANYAHKLSPALLSRCTRFRFSPLKEQDIRVLVDKV 220
                 ......89999999..888888888888888778999999999999999999999999876 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00073      0.42      37      61 ..      77     101 ..      71     174 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00073
      AAA_25  37 llaGapgtGKttlaldlalavatGk 61 
                 l++G+pgtGKt   l la  +   k
  KHJ30979.1  77 LFYGPPGTGKTSTILALARQIYGSK 101
                 789***************9987555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       687  (0.0383178); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        93  (0.00518713); expected 17.9 (0.001)
Passed Fwd filter:                        31  (0.00172904); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              31  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 2736.34
//
Query:       KHJ30980.1  [L=557]
Description: putative peptidyl-prolyl isomerase cwc27 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.6e-40  139.0   0.0    3.8e-40  137.7   0.0    1.6  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.7   0.0   2.1e-44   3.8e-40       4     158 .]      17     194 ..      15     194 .. 0.84

  Alignments for each domain:
  == domain 1  score: 137.7 bits;  conditional E-value: 2.1e-44
  Pro_isomerase   4 ietsskGrivieLfadkaPktvenFlklvkegfYdgttFhRvikgfmvqgGdptgkts.....................ageqekkggesi..... 73 
                    ++t  +G+i++eL a + P t++nFl+++ +g+Yd+t+FhR++++f++qgGdptg+++                                +     
     KHJ30980.1  17 LHTT-AGDIALELWASQLPLTCRNFLQHCIDGYYDNTIFHRLVPKFIIQGGDPTGTGNggesiydggayaksreeggiwP----------Medrkg 101
                    5774.9*************************************************8886666666655544444444441..........044444 PP

  Pro_isomerase  74 .......raipdEit.sklkhkrGalamartgkepnsagsqFfItlkeaphldgkytvFGkVv.eGmdvvekiekvetde.erpkknvkivsaev 158
                             ++dE++ +  +++rG+l+ma++g  p+s+gsqFfItl+ +p+l gk+tvFG+V  e +  v ++ ++e  e erp  ++ki+ +ev
     KHJ30980.1 102 knagpngIGFKDEFHsRIKFNRRGLLGMANDG--PDSNGSQFFITLDSTPELQGKNTVFGRVQgETIYNVARMGEAEIGEgERPLYPIKITGVEV 194
                    44555558999****55555599*******98..8****************************99***********99999*********99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (557 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       784  (0.043728); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3997.55
//
Query:       KHJ30981.1  [L=748]
Description: putative histone deacetylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      7e-80  268.8   0.0      1e-79  268.3   0.0    1.2  1  Hist_deacetyl  Histone deacetylase domain
    1.2e-78  263.8   0.0    1.6e-78  263.4   0.0    1.1  1  Arb2           Arb2 domain


Domain annotation for each model (and alignments):
>> Hist_deacetyl  Histone deacetylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  268.3   0.0   1.1e-83     1e-79       1     307 []      76     402 ..      76     402 .. 0.88

  Alignments for each domain:
  == domain 1  score: 268.3 bits;  conditional E-value: 1.1e-83
                    SCCGTHHHHHHHHHHHHT.THHHHCCE.................EE-----HHHHTTTS-HHHHHHHHCHHHHCHHT.TTHCCHHHCCTSTSSSSS CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl   1 hpenpkRlsaileslaesvglldelel................liqpseatkeellkvHskeYlelleslsnelkkkeeakekeleeiaskllddd 80 
                    hpe+p+R++ai ++ +++ gl+    +                 i++++at++e+ +vH++++ e ++sl++  +++ +  ++++      +  ++
     KHJ30981.1  76 HPEDPRRIAAIFQHFRDA-GLIFTGPDielrlalkksptsfmyRIAARKATRAEICTVHTSAHYEWVQSLNDMTSAQLRDLSAKFD-----TGRKS 165
                    899**************6.5443222256677777778888889**************************9999888744444443.....34678 PP

                    THCTTTCCHHHHHHHHHHHHHHHHHHTTSSSEEEETTSS--TT-BTTB-BTTBSS-HHHHHHHHHHHCC-..SS-EEEEE-SSS--HHHHHHCTT- CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl  81 tpvspktlkaallavgavleavdavlsgsvkaafvlvrPpgHHakaseasGFClvNnvaiaikylqakhe..lkrvailDvDvHhGnGteeafysd 174
                     +v + t++aal+++ga++e++++v+ g+vk+af+++rPpgHHa+++e +GFC++Nnv +a+ +  + +   +++v+ilD+DvHhGnGt+++fy+d
     KHJ30981.1 166 LYVGNLTAEAALISAGAAIETCKNVVLGKVKNAFAVIRPPGHHAESNESMGFCIFNNVPMAATVCLRDYPdiCRKVLILDWDVHHGNGTQNMFYED 261
                    ***************************************************************99775555699********************** PP

                    TTEEEEEEEE-.CCTSTTSS........--TT---SGGGTTSEEEEEE-T.T-BHHHHHHHHHHCHHHHHCCH--SEEEEEE-STTBTTSTT-S-B CS
                    xxxxxxxxxxx.xxxxxxxx........xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl 175 pdvltlSiHry.egifyPgt........galedlgegkgkgfnlnvplee.gtgdeeylkvfeeilrpvleefkPdlilvsaGfDalkgdplgeln 260
                    p+vl++SiH y +g fyPg+        g+++++g g+g g+n+n+ + + g+gd ey+++f++i++p+++ef+Pdl++vsaGfDa++gd+lg++ 
     KHJ30981.1 262 PNVLYISIHVYqNGLFYPGQpedeslpdGNIDKCGIGAGLGKNINIGWADqGVGDGEYMAAFQRIVMPIAQEFDPDLVIVSAGFDAAAGDELGGCF 357
                    ***********66899**65222223335566666999999*****886649******************************************** PP

                    B-HHHHHHHHHHHCCCHGS-G.EEEEE-S---HHHHHHHHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl 261 lsvegykeltkklaeladkvkkvvllleGGYnlealaravtavlsal 307
                    +++  y+++t++l++la+  +kv ++leGGYnl a++r++ av ++l
     KHJ30981.1 358 VTPACYSHMTHMLMSLAN--GKVAVCLEGGYNLGAISRSALAVAKTL 402
                    *****************9..59******************9998875 PP

>> Arb2  Arb2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  263.4   0.0   1.8e-82   1.6e-78       2     259 .]     455     723 ..     454     723 .. 0.96

  Alignments for each domain:
  == domain 1  score: 263.4 bits;  conditional E-value: 1.8e-82
                 HHHHHHHHHHHHHHHHH--EE---TTSSS----GGCEEE-TTGGG-SCEEEEEEE--EEE--C-TTCS-B-CCC-EEE-TCHHHHHHHHCTT-EEEEEE CS
        Arb2   2 lhdviReaqakkLaekyklvkLpilreklsksfenqvlatpnieeakkllvivHdppellaqpdpvtnklelhnsvlvdsvkkyidWavkqkygviDvn 100
                 +++v R+a+++ +ae++++v+L+i+r+  +  f+n+vla+p+i++akk+l+i+Hdppel+aqpdp+tn + ++ns++ ++++ y++Wa+ q++++i+v 
  KHJ30981.1 455 VSEVARTAEKNVFAEEFGMVPLFIQRTISNLIFKNMVLASPEIYKAKKILMIIHDPPELIAQPDPHTNITYAQNSFISKGLLPYLTWATGQDMALISVV 553
                 5799*********************************************************************************************** PP

                 E----..........--SSSS-HHHHHHHHHHHHHHHHHTTTTSSS.......SEEEEEEECCHHHHHHHHHHHS--TTTEEEEEEEECTS-------S CS
        Arb2 101 ipkliteeeeee...skeeeeeesaasesqelllylwdnyielfesa......ekifllGvGdaysgvvkLlserdvrsrvkavinFvaekslravkse 190
                 +p++  ++++ +    ++  +e++ ++ s+e+l+y++dnyie+++ a      +++++lGvG+a+ g+++Ll++rd+r+ v+++++Fv++ sl++v+se
  KHJ30981.1 554 LPQCRPSSATFPtnpPSSLLSESDLSNISREVLCYIYDNYIEPHSPAtalkppTSLTILGVGHAHIGIRQLLISRDCRQIVTSILCFVNG-SLKPVRSE 651
                 *****999988755567777899999******************98888888899***********************************.******** PP

                 SSTHHHHHHHHTEEEEE-TT-CCGTT-...----G.GG--EEE-SSS.SHHHHHHHCHHHHHHHHHCHT-XX CS
        Arb2 191 vdeslsdWYkknSlvfvskkhsvWkkees.kkvrk.ryGrvlrsdke.glnemleehleevtefildkleea 259
                 +d  l++WY++nS+++++++h+vW+++es k v+k ryG+v++++ + ++n+ml+  + e+t+++++k+ ++
  KHJ30981.1 652 MDLGLAAWYRNNSRIYINENHPVWDNDESvKSVHKmRYGDVFKAKGCnSINSMLRLFYLEATTYMARKIIAW 723
                 ********************************************98659*****************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (748 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       368  (0.0205254); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.25s 00:00:00.88 Elapsed: 00:00:00.42
# Mc/sec: 5337.86
//
Query:       KHJ30982.1  [L=117]
Description: putative nucleolar protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-28   99.1  30.5    1.9e-28   99.0  30.5    1.0  1  Cgr1           Cgr1 family
  ------ inclusion threshold ------
        0.1   12.5  17.6       0.12   12.3  17.6    1.2  1  MRP-S26        Mitochondrial ribosome subunit S26
          1    8.0   3.2          1    8.0   3.2    1.0  1  Prismane       Prismane/CO dehydrogenase family
          1    9.6   9.1          3    8.1   8.5    1.8  2  Ndufs5         NADH:ubiquinone oxidoreductase, NDUFS5-15kDa


Domain annotation for each model (and alignments):
>> Cgr1  Cgr1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.0  30.5   4.2e-32   1.9e-28       2     107 ..      17     116 ..      16     117 .] 0.98

  Alignments for each domain:
  == domain 1  score: 99.0 bits;  conditional E-value: 4.2e-32
        Cgr1   2 kgkrvsGksWkteKkafrsksskkkkkkkkswekrqekrkkakaiKklekeLkdekeaerqrrieaikerrkakeEkeRleelaakmhakkveRlkrre 100
                 +g+r++Gk+W++ K+afr k +      ++s++kr e+rk+++ +K++eke+k eke+ r+rriea++++r akeEk R+e++a+ mh+k+veRlkrre
  KHJ30982.1  17 QGMRKNGKQWHERKTAFRLKVG------NSSYAKRVEDRKAMETMKAKEKEMKLEKEDIRNRRIEALRAKRLAKEEKVRYEKMAETMHRKRVERLKRRE 109
                 79*****************999......78********************************************************************* PP

        Cgr1 101 kRnkklk 107
                 kRnk+lk
  KHJ30982.1 110 KRNKMLK 116
                 *****99 PP

>> MRP-S26  Mitochondrial ribosome subunit S26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3  17.6   2.7e-05      0.12      49     130 ..      40     116 ..      15     117 .] 0.75

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.7e-05
     MRP-S26  49 eevekeeeeelkkeseekaeeeeeefkellaiNdewNaelaelReerlkkeaeekkeeilerieekeqkeeekkekaeeevl 130
                  +++k+ e++++ e ++ +e+     +  l+  d +N+++++lR +rl+ke++ + e+ +e++++k+ ++ +++ek+++ ++
  KHJ30982.1  40 SSYAKRVEDRKAMETMKAKEK-----EMKLEKEDIRNRRIEALRAKRLAKEEKVRYEKMAETMHRKRVERLKRREKRNKMLK 116
                 344444444444444443333.....355799****************************************9999998765 PP

>> Prismane  Prismane/CO dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   3.2   0.00023         1      35     115 ..      33     113 ..      21     117 .] 0.83

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00023
                 HHHHHHHHHHHHHHHHC..HHHHHHHHHCHTSTTTB-SHHHHHHHHHHHHCHHHCCSSHHHHHHHHCCHHHCGGGS-SSHHHH CS
                 xxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    Prismane  35 iavlkgaaahaaharel..adtliakalfktltnvnfddekklkrlaealgieeelkdieelaakvaevaledlskeenedir 115
                  +   g +++a+++++   ++t++ak++  +l++ +++++++ +  a++l+ ee+  + e++a+ +++  +e+l+++e + ++
  KHJ30982.1  33 FRLKVGNSSYAKRVEDRkaMETMKAKEKEMKLEKEDIRNRRIEALRAKRLAKEEKV-RYEKMAETMHRKRVERLKRRE-KRNK 113
                 55666788888876555559*******************************99999.99***************9986.4444 PP

>> Ndufs5  NADH:ubiquinone oxidoreductase, NDUFS5-15kDa
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.4     0.048   2.2e+02      44      65 ..      49      71 ..      21      82 .. 0.71
   2 ?    8.1   8.5   0.00068         3      35      88 ..      63     116 ..      49     117 .] 0.72

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.048
                SSSHHHHTT.TSTTHHHHHHHHH CS
      Ndufs5 44 ahgigktra.kkeckiefedfee 65
                 +++ +++a +ke k+e ed+++
  KHJ30982.1 49 RKAMETMKAkEKEMKLEKEDIRN 71
                45555666525888888888765 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00068
                 HHHHHHHHHS..SSHHHHTTTSTTHHHHHHHHHHHT-HHHHHHHHHHHHHHHH-TT CS
      Ndufs5  35 afekewieca..hgigktrakkeckiefedfeecllrqktmkrlkeirkqreklik 88 
                  +eke i      ++   r  ke k+ +e + e ++r++  +rlk  r++r+k++k
  KHJ30982.1  63 KLEKEDIRNRriEALRAKRLAKEEKVRYEKMAETMHRKRV-ERLKR-REKRNKMLK 116
                 5677777643114556667779**************9765.66765.778999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2159  (0.120419); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 856.57
//
Query:       KHJ30983.1  [L=1258]
Description: putative myb-like dna-binding domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.6e-15   55.3   0.0    1.5e-06   28.3   0.0    2.7  2  Myb_DNA-binding  Myb-like DNA-binding domain
    3.2e-06   27.3   2.8      0.049   13.9   0.2    3.2  2  Myb_DNA-bind_6   Myb-like DNA-binding domain
      0.002   18.0   0.6      0.002   18.0   0.6    3.0  2  Myb_DNA-bind_7   Myb DNA-binding like


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.0   2.6e-10   1.5e-06       3      43 ..     835     875 ..     834     878 .. 0.95
   2 !   24.2   0.0   4.6e-09   2.8e-05       3      44 ..    1131    1172 ..    1129    1174 .. 0.96

  Alignments for each domain:
  == domain 1  score: 28.3 bits;  conditional E-value: 2.6e-10
                      SSBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHH CS
  Myb_DNA-binding   3 kWteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwr 43 
                      ++t+eE  l+++a  ++ ++W kIae l++R  k+c+ +++
       KHJ30983.1 835 NFTKEESSLFEKAYFEFPKQWGKIAETLPTRDYKSCIQHYY 875
                      79**************************************8 PP

  == domain 2  score: 24.2 bits;  conditional E-value: 4.6e-09
                       SSBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHHH CS
  Myb_DNA-binding    3 kWteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwrn 44  
                        W+ +E++++  ++  +G +W +I++++ ++t  ++++++++
       KHJ30983.1 1131 YWSVQEQDIFSTLLGYYGTNWHAISKYMATKTHIMVKNHYQR 1172
                       6***************************************96 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.2   2.6e-05      0.15       1      48 [.     836     884 ..     836     894 .. 0.84
   2 !   13.9   0.2   8.2e-06     0.049       1      43 [.    1132    1174 ..    1132    1193 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.6e-05
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwkn.kLrpkis 48 
                     +t+eE  +  k ++++ ++W +Iae l+ R+ k+c +++   k++++++
      KHJ30983.1 836 FTKEESSLFEKAYFEFPKQWGKIAETLPTRDYKSCIQHYYLvKHPSSLK 884
                     799************************99******99887645555544 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 8.2e-06
  Myb_DNA-bind_6    1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwknkL 43  
                      W+++E++i   l   yg +W+ I++ ++ +t+  +++++++++
      KHJ30983.1 1132 WSVQEQDIFSTLLGYYGTNWHAISKYMATKTHIMVKNHYQRQV 1174
                      ***************************99***99999999955 PP

>> Myb_DNA-bind_7  Myb DNA-binding like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.5      0.29   1.8e+03      32      66 ..     870     904 ..     866     921 .. 0.78
   2 !   18.0   0.6   3.3e-07     0.002       5      52 ..    1126    1173 ..    1122    1195 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.29
  Myb_DNA-bind_7  32 liaklfpkrtrrqlKlKFkkEerknpeliekalkk 66 
                      i++++  +  + lK+K k   +k++ + +k  k+
      KHJ30983.1 870 CIQHYYLVKHPSSLKKKLKDQSKKRKGRQSKVKKE 904
                     68999999999999*99999999888776665554 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 3.3e-07
  Myb_DNA-bind_7    5 rkktkkWskeetekFYkaLsqfGtDFsliaklfpkrtrrqlKlKFkkE 52  
                      +++++ Ws +e + F   L  +Gt+++ i+k++  +t+  +K+ +++ 
      KHJ30983.1 1126 QQTSSYWSVQEQDIFSTLLGYYGTNWHAISKYMATKTHIMVKNHYQRQ 1173
                      467899***************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1164  (0.0649228); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.82u 0.25s 00:00:01.06 Elapsed: 00:00:00.43
# Mc/sec: 8700.78
//
Query:       KHJ30984.1  [L=423]
Description: putative glycosyl transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1241  (0.0692175); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.37
# Mc/sec: 3424.01
//
Query:       KHJ30985.1  [L=561]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        2.9    7.9  10.5         38    4.3   0.0    2.8  2  DUF1451   Zinc-ribbon containing domain


Domain annotation for each model (and alignments):
>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0    0.0021        38      27      55 ..     117     145 ..     107     164 .. 0.85
   2 ?    2.3   8.7    0.0089   1.6e+02     117     142 ..     430     455 ..     416     474 .. 0.95

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0021
     DUF1451  27 eaeeltkeelelvaeylkrDleeaarsle 55 
                  +e++++ee++ +++yl++ ++++ +s +
  KHJ30985.1 117 YKEDIEREEADVIRKYLQKAIAHLVASDN 145
                 5799***************9999887765 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.0089
     DUF1451 117 CekCgkelalkkteeippCpkCgate 142
                 C++C+ ++++++ ++ p C +Cg+t 
  KHJ30985.1 430 CKRCNGHHNIRTCSRAPSCGNCGSTM 455
                 ***********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (561 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       823  (0.0459033); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.22s 00:00:00.77 Elapsed: 00:00:00.38
# Mc/sec: 4438.80
//
Query:       KHJ30986.1  [L=191]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       890  (0.0496402); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1420.91
//
Query:       KHJ30987.1  [L=323]
Description: hypothetical protein EV44_g5230 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0057   16.9   0.4      0.011   16.0   0.4    1.5  1  Retrotrans_gag  Retrotransposon gag protein
  ------ inclusion threshold ------
      0.097   12.8   1.5        0.2   11.8   1.5    1.5  1  zf-CCHC         Zinc knuckle


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.4   1.2e-06     0.011       6      92 ..      74     159 ..      69     162 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.2e-06
  Retrotrans_gag   6 slegaAkswlkslvarsidasesWkdlkkaflktflpserkdqleeelsslrQ.gtesvreYvtrfktladqldevlteeakiekfla 92 
                     +l+g+A s++++ + +++ + ++ + + ++       s+ ++++++ l ++rQ   e ++++++r + l+++++   +e + i+ f++
      KHJ30987.1  74 QLTGDAFSHMTNWKMTTPLNDQTIESFFTEIEFFSGTSDLTELAQSTLLTIRQkSGENISKFYQRISVLWTRAN--YSEPERIRSFIK 159
                     67777777777777777666666666666666666667788999******************************..999999999985 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.5   2.3e-05       0.2       2      15 ..     274     287 ..     273     287 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.3e-05
                 CTSSSSSSSSTTTT CS
     zf-CCHC   2 kCynCGepGHiard 15 
                  C++C + GH a+d
  KHJ30987.1 274 RCFRCRGSGHKASD 287
                 7***********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2472.63
//
Query:       KHJ30988.1  [L=773]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.4e-15   55.0   0.0    2.2e-14   53.7   0.0    1.7  1  rve         Integrase core domain
     0.0076   15.9   0.0      0.015   15.0   0.0    1.4  1  RVT_2       Reverse transcriptase (RNA-dependent DNA polymera
  ------ inclusion threshold ------
      0.029   14.1   0.0       0.16   11.8   0.0    2.4  2  rve_3       Integrase core domain
      0.048   12.8   0.7      0.062   12.4   0.0    1.5  2  MDM1        Nuclear protein MDM1
        0.2   11.4   1.3       0.41   10.4   1.3    1.5  1  zf-CCHC_4   Zinc knuckle
       0.31   11.2   1.2        0.9    9.7   1.2    1.9  1  zf-CCHC     Zinc knuckle
        3.9    7.3   8.1        0.2   11.4   1.9    2.0  2  zf-C2H2_10  C2H2 zinc-finger


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.0   8.6e-18   2.2e-14       8     117 ..     428     545 ..     423     547 .. 0.86

  Alignments for each domain:
  == domain 1  score: 53.7 bits;  conditional E-value: 8.6e-18
         rve   8 wqvDvtvvripdggg.............kayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgir 93 
                 +++D++ ++     +               ++l +vd ++ + +a+++ ++++ +t ++   + ++  + ++p+++++D g+e+ + +++e+l d gi 
  KHJ30988.1 428 IHMDLVGGQ-----KslspvstdlsvpnATWFLLAVDEYTSWKWAWPIYSKKTVPTKIRQFLEYLKTNHSKTPKILHTDSGTEFSNAELQEILLDRGIL 521
                 555555333.....112244456667767899******************************9999999999*************************** PP

         rve  94 vsftrpgrpqdnGkvErfhrtlkd 117
                 +  +  + p++nG++Er++rt+ +
  KHJ30988.1 522 WHKSSSHAPEQNGIAERTVRTVTE 545
                 *********************976 PP

>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   5.7e-06     0.015       2      74 ..     701     767 ..     700     769 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 5.7e-06
       RVT_2   2 tyrlvslPkdrkai.gsrWvftkkkddlkevkykarlvaqGfsqkage.dydevfaPvirldsvrLllalaaeee 74 
                 +++lv   +    i   +W  + k    +++k kar  a+Gfs  + e  y +v  P     ++r+llalaa ++
  KHJ30988.1 701 VWTLVPRTEAIGHImTGKWTLKEK----SDGKLKARWCARGFSEPSAEnTYADVLPP----TTLRMLLALAALKK 767
                 677776666554441558888888....69************986554045555555....689*******9876 PP

>> rve_3  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0       5.1   1.3e+04       4      16 ..     388     400 ..     386     400 .. 0.84
   2 ?   11.8   0.0   6.1e-05      0.16       2      36 ..     519     553 ..     518     558 .. 0.88

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 5.1
       rve_3   4 elsyiapgkPqqN 16 
                 e+ +i+ +kP +N
  KHJ30988.1 388 EHVNIKGYKPPDN 400
                 7889999999988 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 6.1e-05
       rve_3   2 gielsyiapgkPqqNglvEsfngtlrdellneelf 36 
                 gi ++ +  + P qNg +E+  +t+ +++   +l+
  KHJ30988.1 519 GILWHKSSSHAPEQNGIAERTVRTVTEKMRALHLQ 553
                 88899999*****************9999887775 PP

>> MDM1  Nuclear protein MDM1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.3       1.9   4.9e+03     120     120 ..     231     231 ..     186     259 .. 0.53
   2 ?   12.4   0.0   2.4e-05     0.062     337     377 ..     503     555 ..     501     597 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 1.9
        MDM1 120 s 120
                 +
  KHJ30988.1 231 Q 231
                 1 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 2.4e-05
        MDM1 337 GthfsrdhLnQllsdqnelWdvlssssS............iSsnlsALdLAss 377
                 Gt+fs ++L+++l d   lW ++ss ++            ++++ +AL L s 
  KHJ30988.1 503 GTEFSNAELQEILLDRGILWHKSSSHAPeqngiaertvrtVTEKMRALHLQSG 555
                 **********************999999**********************997 PP

>> zf-CCHC_4  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.3   0.00016      0.41      32      48 ..     212     228 ..     210     229 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00016
   zf-CCHC_4  32 sfCyiCgvlGHsdkrCd 48 
                 ++C  C+ lGHs+++C+
  KHJ30988.1 212 IKCNFCNNLGHSIDECR 228
                 68**************7 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.2   0.00035       0.9       1      17 [.     212     228 ..     212     229 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00035
                 SCTSSSSSSSSTTTTST CS
     zf-CCHC   1 rkCynCGepGHiardCp 17 
                 +kC  C++ GH   +C 
  KHJ30988.1 212 IKCNFCNNLGHSIDECR 228
                 59**************7 PP

>> zf-C2H2_10  C2H2 zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.5       2.1   5.4e+03       2       6 ..     130     134 ..     130     137 .. 0.83
   2 ?   11.4   1.9   7.7e-05       0.2       1      15 [.     209     223 ..     209     230 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.1
  zf-C2H2_10   2 nkitC 6  
                 n+itC
  KHJ30988.1 130 NNITC 134
                 99*** PP

  == domain 2  score: 11.4 bits;  conditional E-value: 7.7e-05
  zf-C2H2_10   1 KnkitCSYChetGHt 15 
                 K+ i+C +C+  GH+
  KHJ30988.1 209 KSVIKCNFCNNLGHS 223
                 899***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (773 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       855  (0.0476881); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 5205.46
//
Query:       KHJ30989.1  [L=398]
Description: putative rna-3 -phosphate cyclase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.5e-28   96.9   0.1    1.5e-27   96.1   0.1    1.4  1  RTC_insert   RNA 3'-terminal phosphate cyclase (RTC), insert 
    2.6e-26   92.2   0.3    3.5e-26   91.8   0.3    1.2  1  RTC          RNA 3'-terminal phosphate cyclase
  ------ inclusion threshold ------
      0.027   14.1   0.0      0.077   12.6   0.0    1.8  2  SelB-wing_3  Elongation factor SelB, winged helix


Domain annotation for each model (and alignments):
>> RTC_insert  RNA 3'-terminal phosphate cyclase (RTC), insert domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.1   0.1   2.6e-31   1.5e-27       3     103 .]     206     314 ..     205     314 .. 0.93

  Alignments for each domain:
  == domain 1  score: 96.1 bits;  conditional E-value: 2.6e-31
                 ----SEEEEEEEEESS-THHHHHHHHHHHHHHTTTSSEEEEEEE.EE-CGGC-SS-.......EEEEEEEEE-T.TS-EEEEEEE..E-TT--HHHHHH CS
  RTC_insert   3 rGrvkrirGvafaarvspsvanrmveaargvLnkllpdvyiytdvvkegkesgksp.......GfgisLvaetttegvllgaeal..gekgvppedvGe 92 
                 +Gr+kr+rGva++++vs++ + rm++aar++Ln ll+d+ i+t+ + ++++  k+        GfgisL+aet+  gv+++a++   +e+gv+pe++G+
  KHJ30989.1 206 PGRIKRVRGVAYCTGVSANGNMRMIQAARQLLNPLLCDISIATQ-YNQAASVTKGDknirfgiGFGISLIAETSCRGVIYSADVStkSEGGVTPEEIGR 303
                 7*******************************************.666666666656699999************9********999999********* PP

                 HHHHHHHHHHH CS
  RTC_insert  93 eaaeeLleeie 103
                 ++a +Lle+i+
  KHJ30989.1 304 KCALQLLETIS 314
                 ********995 PP

>> RTC  RNA 3'-terminal phosphate cyclase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.8   0.3   5.9e-30   3.5e-26       2     178 ..      10     322 ..       9     365 .. 0.72

  Alignments for each domain:
  == domain 1  score: 91.8 bits;  conditional E-value: 5.9e-30
                 TTTSTHHHHHHHHHHHHH---EEEESTTTTSSS-S--HHHHHHHHHHHHHHT-EEE--STT-SEEEEE------SEEEEEEESSE.............. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............. RF
         RTC   2 gegGgqiLRtalaLsaltgkpvrIenIRanRkkPGLraqhltavrllakitnaevegaeigsteleFkPgeikageyevdigtAG.............. 86 
                 ++ G++ + ++l+Ls+ltg+p++I++IR+  ++PGL++++++++rl + +tn++v   +   t++ + Pg i++          G              
  KHJ30989.1  10 RFTGHKSFSHRLVLSTLTGRPIHISHIRSSSTNPGLAPHEISLLRLFDSVTNGSVIQISYTGTSFSYIPGIITG----------Gittvesdcvncvlp 98 
                 5789**************************************************999977666*******5555..........333334444446688 PP

                 .....BHHHHHHHHHHHHTTSSS-EEEEEEE...BS..BBTTS--HHHHHHTHHHHHHHHT.-E..EEEEEEE--BTTTB-....EEEEEEEE-.-S.- CS
                 .....xxxxxxxxxxxxxxxxxxxxxxxxxx...xx..xxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxx....xxxxxxxxxxxx.x RF
         RTC  87 .....sitlllqtllplllfakkpseltlkG...gT..nvsaapsvdylktvllpllkrfgvle..lelelkkrGfypkGg....Gevelevepskk.l 168
                      +++++l +l++l +f+k+p+++++kG   +T   ++ ++svd+++t++lp++++fg+ +  lel++ +r ++  Gg    G vel+ e + + +
  KHJ30989.1  99 atcdrGVSWFLLPLCLLGPFSKSPIRVRFKGdgvITssTENGDISVDTMRTAVLPYYEHFGISTnsLELRVIQRSCAGPGGiggcGIVELRFECQLRlP 197
                 88999*************************9766562234569******************86688999999999987777777788887776554434 PP

                 --EB............................................................................................... CS
                 xxxx............................................................................................... RF
         RTC 169 kpie............................................................................................... 172
                 k+++                                                                                               
  KHJ30989.1 198 KTVHlnhcpgrikrvrgvayctgvsangnmrmiqaarqllnpllcdisiatqynqaasvtkgdknirfgigfgisliaetscrgviysadvstkseggv 296
                 445477777777777777777777777777777777777777666666666666666666666666666666666666666666666666666666666 PP

                 ....................BSS-HH CS
                 ....................xxxxxx RF
         RTC 173 ....................acvDeh 178
                                     + v + 
  KHJ30989.1 297 tpeeigrkcalqlletisqgGFVTRI 322
                 66666555555555555555555555 PP

>> SelB-wing_3  Elongation factor SelB, winged helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0         1   6.3e+03       5      17 ..     138     150 ..     137     151 .. 0.82
   2 ?   12.6   0.0   1.3e-05     0.077      19      46 ..     300     327 ..     297     328 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1
                  TTS-BBHHHHHHH CS
  SelB-wing_3   5 eegeitaaefRdl 17 
                  e+g i++  +R +
   KHJ30989.1 138 ENGDISVDTMRTA 150
                  6799999999975 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 1.3e-05
                  T--HHHHHHHHHHHHHCTSEEEETTEEE CS
  SelB-wing_3  19 gtSRKyaiplLEyfDrigvTrRvgDkRv 46 
                  +++RK a++lLE   + g++ R+g   v
   KHJ30989.1 300 EIGRKCALQLLETISQGGFVTRIGSMTV 327
                  58********************997655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2948.26
//
Query:       KHJ30990.1  [L=604]
Description: putative pwwp domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-13   49.1   0.0    6.8e-12   45.6   0.0    3.0  1  PWWP      PWWP domain
  ------ inclusion threshold ------
      0.024   14.7   0.2        0.1   12.6   0.2    2.2  1  Med26     TFIIS helical bundle-like domain


Domain annotation for each model (and alignments):
>> PWWP  PWWP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6   0.0   7.6e-16   6.8e-12       2      90 ..     155     258 ..     154     319 .. 0.90

  Alignments for each domain:
  == domain 1  score: 45.6 bits;  conditional E-value: 7.6e-16
                 STTEEEEEEESSSEEEEEEEEECCCCCCCCHCT---SSS....................EEEEEETTTTEEEEE-GGGEEE-SHHHHHHHHHTTSS-HH CS
        PWWP   2 qpgdlvwakvkgypwWPavvidpeevpekvlkkkekske....................lylVkFfgdkeyawvkekdlkpfteedeeeylkkkkkkks 80 
                 +pgd   +++kgyp WPa+v+d+e++p++ lk+++ + +                    +++V ++ ++e+ w+++ dl + + +++++   +++k   
  KHJ30990.1 155 KPGDYFYVRLKGYPLWPAIVCDEEMLPKSLLKTRPVTAAradgsyredfmdgapkakdrSFPVLYLYTNEFGWIPNYDLLEIDFDEITNTTGSMRK--- 250
                 79********************************99999*************************************99999988886666555555... PP

                 HHHHHHHHHH CS
        PWWP  81 kkkfkkAlee 90 
                   ++  A + 
  KHJ30990.1 251 --DLATARQL 258
                 ..34444444 PP

>> Med26  TFIIS helical bundle-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   1.1e-05       0.1       3      51 ..     468     521 ..     466     522 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.1e-05
                 HHHS---....H.HH.HHHSHHHHHHHHHH.......-TTS-HHHHHHHHHHHHHHHH CS
       Med26   3 LaqLeklpitte.tL.kstgIGkvVnalrk.......hkhetaevktlAksLvekWkk 51 
                 +++Le    ++e t  ++t+I kv +a+ k       +   + + k + ++L+++W k
  KHJ30990.1 468 IEKLEAY-NDLEaTViRQTKINKVLKAILKipkipleN---EYKFKPRSQNLLDQWNK 521
                 6788888.59999889************9833343211...67788889999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (604 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1738  (0.0969379); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.41
# Mc/sec: 4413.47
//
Query:       KHJ30991.1  [L=525]
Description: putative mitochondrial integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-79  265.9   6.6    3.9e-79  265.4   6.6    1.2  1  DUF2417   Region of unknown function (DUF2417)
  ------ inclusion threshold ------
      0.094   12.8   1.8        2.4    8.3   0.5    2.5  2  GWT1      GWT1
        0.2   11.9   0.0        0.4   10.9   0.0    1.4  1  Ivy       Inhibitor of vertebrate lysozyme (Ivy)
        1.6    7.0  12.7        2.2    6.5  12.7    1.1  1  DUF2070   Predicted membrane protein (DUF2070)


Domain annotation for each model (and alignments):
>> DUF2417  Region of unknown function (DUF2417)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  265.4   6.6   8.7e-83   3.9e-79      10     236 .]      34     259 ..      25     259 .. 0.97

  Alignments for each domain:
  == domain 1  score: 265.4 bits;  conditional E-value: 8.7e-83
     DUF2417  10 kkshrtigeessegylspddpavspynlwkvrnlrwilnilllinliwlvllLisdFvslpglnnrgsgFndlalillslianllnllffglpSkldrv 108
                 ++sh  + ++++egylspddpa +pynlw+vr+lr+i++il  ++ +w+vl+++s+Fv++pgln+rg gF ++++++lsl  +l+ llff++pSk+ +v
  KHJ30991.1  34 EQSH-LLSRQNQEGYLSPDDPAITPYNLWSVRFLRYISIILASLTWVWWVLTFVSIFVTPPGLNSRGPGFCSFSFASLSLNLLLIVLLFFSIPSKAAQV 131
                 4555.577789999************************************************************************************* PP

     DUF2417 109 lnivlavLllvnllllllvkytReregfvgiasvlWaaltfllgilldryvekgkkeeeerltgreetrhtlkewlsilvrniikllllvvlilltltl 207
                 + ++lav+ll++++++l+v ++R +eg++gi+sv+W++l++++++++dr+v +gk+ eeerltgr+etr+tl ewl+++ ++i+ ++++ v++ll++tl
  KHJ30991.1 132 TCLTLAVILLLDMIMILSVYRIRVEEGWIGIISVIWTLLMSIWALYTDRIVSWGKHGEEERLTGRQETRRTLFEWLAVFSSTIVLIAITFVAFLLSCTL 230
                 *************************************************************************************************** PP

     DUF2417 208 lLralDaslespgkfywvdnhkyqlHlkC 236
                 +Lr++D+sl++pgk+y+vd++kyq+Hl C
  KHJ30991.1 231 ILRVRDSSLNAPGKMYFVDGEKYQIHLFC 259
                 ***************************** PP

>> GWT1  GWT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.5   0.00053       2.4      44     104 ..      60     122 ..      26     151 .. 0.80
   2 ?    3.2   0.0     0.019        86       5      75 ..     161     231 ..     156     280 .. 0.53

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00053
        GWT1  44 kkesketlkllikllllsilllllllllelyvef..vSRrlaNlpYvlwvvalnltllllfll 104
                  ++ +++ ++ i l++l+ ++++l++++ +++ +  +SR    +++ +  ++lnl l++l+++
  KHJ30991.1  60 LWSVRFLRYISIILASLTWVWWVLTFVSIFVTPPglNSRGPGFCSFSFASLSLNLLLIVLLFF 122
                 567778888999999*********888888777688999988888888888888877776653 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.019
        GWT1   5 GlfsliGylaiyllgvslgkyvlkrekeaeeeekkkkkkkkesketlkllikllllsilllllllllelyv 75 
                 G++s+i  l + ++++++ ++v   ++ +ee+ + +++++ +  e+l+++ + ++l +++++++ll+ + +
  KHJ30991.1 161 GIISVIWTLLMSIWALYTDRIVSWGKHGEEERLTGRQETRRTLFEWLAVFSSTIVLIAITFVAFLLSCTLI 231
                 55555555555555566655555444433333344444555666666665555555555444433333333 PP

>> Ivy  Inhibitor of vertebrate lysozyme (Ivy)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   8.9e-05       0.4      29      91 ..     238     303 ..     233     312 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 8.9e-05
                 SEEEEEEEEEETTEEEEEEEEE-T...T-TTTEEEEEEEETTTTEEEEEEEEEETTTCCCT-GGGT CS
         Ivy  29 gtsspsqavtlagkkYlvgslCkp...hdCaserlavlfskdkkkaygllvtvpekleadkapskh 91 
                    +p ++  ++g+kY++   C p   hd ++    vlf+  +k  ++ +++++e++ ++k+ s++
  KHJ30991.1 238 SLNAPGKMYFVDGEKYQIHLFCTPeisHDHNKTSPTVLFESGDKAFMAGMIQIAESAMQNKSISRY 303
                 5678999999************986669*9***********9999999999999999998887776 PP

>> DUF2070  Predicted membrane protein (DUF2070)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5  12.7   0.00049       2.2      42     177 ..      78     237 ..      53     246 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.00049
     DUF2070  42 llfglpalvaflltlpvlrilggrltykrslflalltelivviisllaillsallqalvllalvlslalvfalrllvlvavsdesllkav..lpaliqp 138
                  +  + ++v++++t p l++ g  + +   + l+l  +liv++++ +++ ++        + + l+la+++ l ++++++v + ++   +  ++++i +
  KHJ30991.1  78 WVWWVLTFVSIFVTPPGLNSRGPGFCSFSFASLSLNLLLIVLLFFSIPSKAA--------QVTCLTLAVILLLDMIMILSVYRIRVEEGWigIISVIWT 168
                 3344568999999999999988888777778899999999999888888888........667899999999999999999999988877668888888 PP

     DUF2070 139 llailllvly..............................fspesfllllllslifalavylfivvvdr 177
                 ll+ + ++++                              + +++++l++++ ++f+l + l+++v d+
  KHJ30991.1 169 LLMSIWALYTdrivswgkhgeeerltgrqetrrtlfewlaVFSSTIVLIAITFVAFLLSCTLILRVRDS 237
                 88888888889*******************988887776644556666666666666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (525 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       927  (0.0517039); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 3528.97
//
Query:       KHJ30992.1  [L=422]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        8.5    6.4   6.9         59    3.7   4.6    2.7  2  DUF1451   Zinc-ribbon containing domain


Domain annotation for each model (and alignments):
>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.013   2.4e+02      28      52 ..      31      55 ..      17      60 .. 0.82
   2 ?    3.7   4.6    0.0033        59     117     143 ..     341     367 ..     337     370 .. 0.93

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.013
     DUF1451 28 aeeltkeelelvaeylkrDleeaar 52
                +++++kee++ +++yl+  + ++a+
  KHJ30992.1 31 KDDIEKEEVAAFQAYLQLAIDNFAA 55
                67899************99988875 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0033
     DUF1451 117 CekCgkelalkkteeippCpkCgateF 143
                 C++C+ +   k+ ++ p C +Cg+t+ 
  KHJ30992.1 341 CKRCNGHYPTKNCSRAPSCGNCGSTNH 367
                 ***********************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1004  (0.0559987); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3007.32
//
Query:       KHJ30993.1  [L=111]
Description: hypothetical protein EV44_g3509 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       193  (0.0107647); expected 358.6 (0.02)
Passed bias filter:                      143  (0.0079759); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.21s 00:00:00.56 Elapsed: 00:00:00.37
# Mc/sec: 894.26
//
Query:       KHJ30994.1  [L=1179]
Description: putative smc n terminal domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.1e-69  232.8   2.5    1.5e-68  230.6   2.5    2.1  1  SMC_N        RecF/RecN/SMC N terminal domain
    8.4e-21   74.5   0.7    3.1e-20   72.6   0.2    2.3  2  SMC_hinge    SMC proteins Flexible Hinge Domain
    5.3e-08   33.0  11.8    0.00073   19.4   0.0    4.0  4  AAA_21       AAA domain, putative AbiEii toxin, Type IV TA sy
    0.00034   20.7   5.7    0.00034   20.7   5.7    9.5  9  Cnn_1N       Centrosomin N-terminal motif 1
      0.001   18.8   0.1     0.0025   17.5   0.1    1.6  1  AAA_29       P-loop containing region of AAA domain
  ------ inclusion threshold ------
       0.43   10.6   5.0          4    7.5   0.5    3.1  2  Toprim_Crpt  C-terminal repeat of topoisomerase
       0.62    8.5  12.0      0.017   13.7   4.1    2.0  2  FUSC         Fusaric acid resistance protein family
       0.74   10.3   0.0       0.74   10.3   0.0    5.9  4  ABC_tran     ABC transporter
        0.9    9.4   8.4       0.11   12.3   1.5    3.3  2  HSBP1        Heat shock factor binding protein 1


Domain annotation for each model (and alignments):
>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  230.6   2.5   7.4e-72   1.5e-68       3     215 ..       4    1165 ..       2    1169 .. 0.99

  Alignments for each domain:
  == domain 1  score: 230.6 bits;  conditional E-value: 7.4e-72
                  EEEEEESETTEECEEEEEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEE....SSSSSS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxx RF
       SMC_N    3 krleienFksyagktvilpfsksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkk....lkieke 95  
                   +++i++Fksya +tvi  +++sf++i+G NGSGKsn+ld+i+FvLG ++++++r+++l+dli+k + +a v+ka+v+i+fdn dkk      +e +
  KHJ30994.1    4 IEVVIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDSICFVLGITNMSTVRAQNLQDLIYK-RGQAGVTKASVTIVFDNRDKKkspiGFEEYP 99  
                  5799************************************************************9.9******************998777778889 PP

                  CEEEEEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT......................................................... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......................................................... RF
       SMC_N   96 evsisrrvkrkgeseykingkevtkkevsellesagiske......................................................... 135 
                  ++s++r+++ +g+s+y ing++++++ v++l++s++++++                                                         
  KHJ30994.1  100 QISVTRQIMLGGTSKYLINGHRAQQQTVQNLFQSVQLNINnpnflimqgkitkvlnmksleilamieeaagtrmfedrrdrafktmakkemkvqeit 196 
                  9************************************************************************************************ PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30994.1  197 ellrdeiepkleklrtekrafldfqqtqndlerltrlvvahdyiksnqklnqsqsdleqkklemckleadslklkseieyltedvkrvrslrekevk 293 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30994.1  294 rggmaqaleeklknfshelvrlttvvdlkeasiseererkaiilrniaelksfleqktyiydeiqmqydranqelqkqsqevevkeellqtlqtgva 390 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30994.1  391 skegqesgyqgqlqdarnrvsaasteqeqlklkithletrieeespraikakdqnkellnglqslrveaqtlenqlktlgfipgqendmykqetelq 487 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30994.1  488 neiwelkgqidslkrkviniefnyddptpnfnrhkvkglvaqlftldkkrldtataleicaggrlynvvvdtettgtqilqkgklrkritiiplnki 584 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30994.1  585 taikassekidtalqicpgkvdlalsligfdeevsaamdyvfgntlicadaatakritfdpvirmksitlegdsydpsgtlsggssansngvlitlq 681 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30994.1  682 klnelnktlehkedslrvlqatiasekqklnqikkikqeldlksheiklcgeqiennsstsiiqvvenmklnvsqmkddlkearkrqeqanldikri 778 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30994.1  779 ekdivdfhsnkdgklielqtsldllrksltsnlrnfkdlqkklqearldleqagsdlsttqdqlhdieqilltqdkeihildekkkeiqkkhdnaha 875 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30994.1  876 llleehakltgfdeelnsleqisrsksakivegsleiqkighqieksckeiqaakqaitsmekehgwiidekgsfglagslydfngqnisecksslr 972 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ30994.1  973 nlserfqgmkkkinpkvmnmidsvekkevslknmmktvirdkkkieetiitldeykkkalletwtkvnkdfgqifaellpgsfakldppegktindg 1069
                  ************************************************************************************************* PP

                  ................CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEEEEEEEE CS
                  ................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  136 ................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklvgvtkve 215 
                                  ++SgG+++L+al+L++A+ ++kpap+y+lDe+daaLD ++++++ +l+k++ k +Qfiv+sl+++m+++a++++++++ e
  KHJ30994.1 1070 lefkvslgnvwkqsltEFSGGQRSLIALSLIMALLQFKPAPMYILDEVDAALDLSHTQNIGRLIKTRFKGSQFIVVSLKDGMFQNANRIFRTRFSE 1165
                  ******************************************************************************************998844 PP

>> SMC_hinge  SMC proteins Flexible Hinge Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.6   0.2   1.6e-23   3.1e-20       2     116 ..     521     641 ..     520     642 .. 0.92
   2 ?   -2.4   0.0       2.9   5.8e+03      74     103 ..     983    1013 ..     972    1026 .. 0.79

  Alignments for each domain:
  == domain 1  score: 72.6 bits;  conditional E-value: 1.6e-23
   SMC_hinge   2 kgvlGrladlievd.egye..kAveaalgnrlqalvvedeetakkiieflkkknagratflpldrikqknkadgandkns.....gavplidlvevdde 92 
                 ++v G +a+l+++d ++ +  +A+e+ +g+rl ++vv++e t ++i++  k +  +r+t++pl++i+  + ++++ d        ++  +++l+ +d+e
  KHJ30994.1 521 HKVKGLVAQLFTLDkKRLDtaTALEICAGGRLYNVVVDTETTGTQILQKGKLR--KRITIIPLNKITAIKASSEKIDTALqicpgKVDLALSLIGFDEE 617
                 5699**********777778899************************887777..79********999888888887766899**************** PP

   SMC_hinge  93 lrkalryllgdtlvvdsldeAeel 116
                 +++a++y++g+tl++ + ++A+++
  KHJ30994.1 618 VSAAMDYVFGNTLICADAATAKRI 641
                 **********************98 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.9
   SMC_hinge   74 ndknsgavplidlvevdde.lrkalryllgd 103 
                  +++n+++  +id ve ++  l+++++ +++d
  KHJ30994.1  983 KKINPKVMNMIDSVEKKEVsLKNMMKTVIRD 1013
                  4455589999999999988888888877765 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.1   1.2e-06    0.0024       1      26 [.      27      59 ..      27     106 .. 0.72
   2 ?   -1.4   0.1      0.79   1.6e+03      66     123 ..     393     450 ..     390     509 .. 0.76
   3 ?    0.0   2.1       0.3     6e+02      34     202 ..     706     876 ..     695     922 .. 0.72
   4 !   19.4   0.0   3.7e-07   0.00073     233     296 ..    1083    1146 ..    1004    1146 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.2e-06
      AAA_21  1 lnvliGpNgsGKSnLLdaldllarl.......d 26
                +n ++G NgsGKSn+Ld + ++ ++       +
  KHJ30994.1 27 FNSITGLNGSGKSNILDSICFVLGItnmstvrA 59
                799****************88877776665552 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.79
      AAA_21  66 lsqgvryryglrlersqveeklssvetllesgllldkrsleeedvfnpeargirggvs 123
                 + q++ y++ l+  r++v++  +++e+l+++ + l  r++ee ++ +  ++ +++++ 
  KHJ30994.1 393 EGQESGYQGQLQDARNRVSAASTEQEQLKLKITHLETRIEEESPRAIKAKDQNKELLN 450
                 5788889999999999997777777777777777777777777777766666665554 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.3
      AAA_21  34 delsggggirkipslldlydpeipfefeieeflsqgvryryglrlersqv..eeklssvetllesgllldkrsleeedvfnpeargirggvsvfslkel 130
                 +e+++ ++i+ki  +ldl++ ei+ + e +e +s+ + ++   + + +    ++ l++ ++++e   l+ kr+++++++f ++++g  + ++   +   
  KHJ30994.1 706 SEKQKLNQIKKIKQELDLKSHEIKLCGEQIENNSSTSIIQVVENMKLNVSqmKDDLKEARKRQEQANLDIKRIEKDIVDFHSNKDGKLIELQTSLDLLR 804
                 577778888888899999999999999999555555555555555555558888888888888888888888888888888888887777777766666 PP

      AAA_21 131 svsepndlqfgkaltditsrawsllllldglrkerigllnifadyfgfakekrllqrlvrslklveielsdl 202
                     +n + f+++  ++ +   +l++   +l   +  l +i + +++++ke+++l++  +++++ ++++++l
  KHJ30994.1 805 KSLTSNLRNFKDLQKKLQEARLDLEQAGSDLSTTQDQLHDIEQILLTQDKEIHILDEKKKEIQKKHDNAHAL 876
                 666666666666666666666666666666665566666666677777777777777666666666666655 PP

  == domain 4  score: 19.4 bits;  conditional E-value: 3.7e-07
      AAA_21  233 parelSdGtkrll..alltallralkkgsllliDEpEngLHPkllrrllellkelsr.ngaQviltT 296 
                  +++e+S G+++l+   l+ all+  +  + +++DE+++ L+ + +  + +l+  ++r +g+Q+i+++
  KHJ30994.1 1083 SLTEFSGGQRSLIalSLIMALLQFKPA-PMYILDEVDAALDLSHTQNIGRLI--KTRfKGSQFIVVS 1146
                  67899*******767999999999999.************************..333368***9986 PP

>> Cnn_1N  Centrosomin N-terminal motif 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.3       1.9   3.7e+03      41      70 ..     185     214 ..     169     217 .. 0.63
   2 ?   -0.9   3.5      0.95   1.9e+03       8      35 ..     259     286 ..     237     332 .. 0.61
   3 ?   -0.5   1.0      0.69   1.4e+03      48      70 ..     364     386 ..     339     389 .. 0.65
   4 !   20.7   5.7   1.7e-07   0.00034       6      61 ..     407     468 ..     403     471 .. 0.75
   5 !    6.3   0.4    0.0053        11      36      68 ..     474     506 ..     469     509 .. 0.88
   6 ?    0.2   8.4      0.43   8.5e+02       9      70 ..     711     772 ..     703     775 .. 0.84
   7 ?    0.3   1.1      0.39   7.7e+02      53      72 ..     801     820 ..     791     856 .. 0.58
   8 ?   -1.9   1.7       1.9   3.8e+03      50      65 ..     917     932 ..     853     940 .. 0.56
   9 ?    3.5   0.8     0.041        81      26      68 ..     974    1023 ..     967    1027 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.9
      Cnn_1N  41 llkenielkveveslqkelkekkkllreae 70 
                 + k+ +++++  e l++e++ k ++lr  +
  KHJ30994.1 185 MAKKEMKVQEITELLRDEIEPKLEKLRTEK 214
                 455555566666666777777766666654 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.95
      Cnn_1N   8 qidkLkKENFdLKLriyfLeerleklse 35 
                 ++ kL+ +   LK +i +L e +++ ++
  KHJ30994.1 259 EMCKLEADSLKLKSEIEYLTEDVKRVRS 286
                 3444444444555555555555444444 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.69
      Cnn_1N  48 lkveveslqkelkekkkllreae 70 
                   +e+++  +e++ k++ll+ ++
  KHJ30994.1 364 ANQELQKQSQEVEVKEELLQTLQ 386
                 45666777777777777777665 PP

  == domain 4  score: 20.7 bits;  conditional E-value: 1.7e-07
      Cnn_1N   6 eeqidkLkKENFdLKLriyfLeerleklse......eqkeellkenielkveveslqkelke 61 
                  + +++ + E   LKL+i +Le r+e+ s+      +q++ell+ +  l+ve ++l+++lk+
  KHJ30994.1 407 RNRVSAASTEQEQLKLKITHLETRIEEESPraikakDQNKELLNGLQSLRVEAQTLENQLKT 468
                 567788899999******************66666666666666666666666666666664 PP

  == domain 5  score: 6.3 bits;  conditional E-value: 0.0053
      Cnn_1N  36 eqkeellkenielkveveslqkelkekkkllre 68 
                  q +++ k+ +el+ e+ +l+ +++++k+++ +
  KHJ30994.1 474 GQENDMYKQETELQNEIWELKGQIDSLKRKVIN 506
                 6789999*******************9999865 PP

  == domain 6  score: 0.2 bits;  conditional E-value: 0.43
      Cnn_1N   9 idkLkKENFdLKLriyfLeerleklseeqkeellkenielkveveslqkelkekkkllreae 70 
                 ++++kK    L L+ ++ +   e++++ +++++++   ++k +v +++++lke +k+ ++a+
  KHJ30994.1 711 LNQIKKIKQELDLKSHEIKLCGEQIENNSSTSIIQVVENMKLNVSQMKDDLKEARKRQEQAN 772
                 5556666666888888888889999999****************************888875 PP

  == domain 7  score: 0.3 bits;  conditional E-value: 0.39
      Cnn_1N  53 eslqkelkekkkllreaeka 72 
                   l+k+l +  +  ++++k+
  KHJ30994.1 801 DLLRKSLTSNLRNFKDLQKK 820
                 44444444444444444443 PP

  == domain 8  score: -1.9 bits;  conditional E-value: 1.9
      Cnn_1N  50 veveslqkelkekkkl 65 
                  ++e+  ke+++ k+ 
  KHJ30994.1 917 HQIEKSCKEIQAAKQA 932
                 2333333444444444 PP

  == domain 9  score: 3.5 bits;  conditional E-value: 0.041
      Cnn_1N   26 Leerleklse.......eqkeellkenielkveveslqkelkekkkllre 68  
                  L er++ +++         +++++k+ + lk  +++  +++k+ ++ +  
  KHJ30994.1  974 LSERFQGMKKkinpkvmNMIDSVEKKEVSLKNMMKTVIRDKKKIEETIIT 1023
                  6677777777777788889999*****************99999988765 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.1   1.3e-06    0.0025      24      46 ..      27      49 ..      15      56 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.3e-06
      AAA_29 24 atlltGpsGsGKSTllDAiqalL 46
                +  +tG +GsGKS +lD+i ++L
  KHJ30994.1 27 FNSITGLNGSGKSNILDSICFVL 49
                5679***************9998 PP

>> Toprim_Crpt  C-terminal repeat of topoisomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.5     0.002         4       7      36 ..     182     211 ..     180     225 .. 0.84
   2 ?    3.5   0.4     0.035        70      12      53 ..     791     832 ..     784     838 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.002
  Toprim_Crpt   7 gktiagkklseeevkeLltkgktgllkGFk 36 
                  +kt+a+k+++ +e++eLl++   ++l+ ++
   KHJ30994.1 182 FKTMAKKEMKVQEITELLRDEIEPKLEKLR 211
                  89*****************99888888776 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.035
  Toprim_Crpt  12 gkklseeevkeLltkgktgllkGFksKkgkkFdAyLvldkde 53 
                  gk ++ +   +Ll+k  t+ l++Fk  ++k  +A L l++++
   KHJ30994.1 791 GKLIELQTSLDLLRKSLTSNLRNFKDLQKKLQEARLDLEQAG 832
                  78888899999**************99999999999999875 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   4.1   8.6e-06     0.017     154     323 ..     297     468 ..     292     481 .. 0.91
   2 ?   -1.2   1.0      0.27   5.4e+02     260     651 ..     800     850 ..     749     899 .. 0.43

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 8.6e-06
        FUSC 154 vapalrarlrallrdalalaaaalageegaeareaararlaadilalealrsqaayesprirararalrrllsrmlallallsslarllarlraeeaaa 252
                 +a+al ++l+   +++++l++ +   e + ++++++ a +++ i++l + ++q +y   +i+ + +++++ l+++   + +  +l + l++  a+++++
  KHJ30994.1 297 MAQALEEKLKNFSHELVRLTTVVDLKEASISEERERKAIILRNIAELKSFLEQKTYIYDEIQMQYDRANQELQKQSQEVEVKEELLQTLQTGVASKEGQ 395
                 6899*****************999999999998999999******************************************************999999 PP

        FUSC 253 vpelaallaelaal..eaaaaaealeaalaalrarlralrraleadadtaalllarlaellaelaqllaslra 323
                 +   +  l+++++   +a+  +e+l+ ++++l++r+++ ++++ ++ d++ +ll  l++l  e++ l  +l++
  KHJ30994.1 396 ESGYQGQLQDARNRvsAASTEQEQLKLKITHLETRIEEESPRAIKAKDQNKELLNGLQSLRVEAQTLENQLKT 468
                 999777777777776657778899999****************************999998888887777766 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.27
        FUSC 260 laelaal..eaaaaaealeaalaalrarlralrraleadadtaalllarlaellaelaqllaslraleaaiaaarraerlarhrdhlaallnglraala 356
                 l+ l++   ++ +  ++l+++l++ r +l+++ ++l                                                               
  KHJ30994.1 800 LDLLRKSltSNLRNFKDLQKKLQEARLDLEQAGSDL--------------------------------------------------------------- 835
                 222222122111112222222222222222222221............................................................... PP

        FUSC 357 illaglfWiatgWpsGatavllaaivcslfatldnPapallqfligtllavlaallllfvvlPhvdgfplLvlvlapplllgglllarprlagiglgla 455
                                                                                                                    
  KHJ30994.1   - ---------------------------------------------------------------------------------------------------   -
                 ................................................................................................... PP

        FUSC 456 vffalllapqnamtydfatflnsalAlllGvllaavvfrlirpvsaewlarrllralrrdlaraasrpaaeaesrfesrmldrlaqllprlaaapparr 554
                                                                                                                    
  KHJ30994.1   - ---------------------------------------------------------------------------------------------------   -
                 ................................................................................................... PP

        FUSC 555 ellrdglaalrlgravlrLrraleralaaearaaldavlaalafrapaaarsarrlrapaaalraldaalaalaaseatsalrralaaLvrlrlall 651
                                                                                                     ++++L+++++ ll
  KHJ30994.1 836 ----------------------------------------------------------------------------------STTQDQLHDIEQILL 850
                 ..................................................................................223333333333322 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.1   0.00083       1.7      15      38 ..      29      52 ..      24     155 .. 0.73
   2 ?   -6.2   8.7         9   1.8e+04     116     125 ..     333     342 ..     230     472 .. 0.60
   3 ?   -3.9  11.2         9   1.8e+04      35     134 ..     721     861 ..     683     864 .. 0.52
   4 ?   10.3   0.0   0.00037      0.74      86     134 ..    1064    1116 ..     954    1119 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00083
                EEEESTTSSHHHHHHHHTTSS--S CS
                xxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 15 aivGenGaGKStLlkllagllkpt 38
                 i+G nG+GKS +l  ++  l  t
  KHJ30994.1 29 SITGLNGSGKSNILDSICFVLGIT 52
                699************998766544 PP

  == domain 2  score: -6.2 bits;  conditional E-value: 9
                 HHHHHHHHHH CS
                 xxxxxxxxxx RF
    ABC_tran 116 rvalarallk 125
                 +  + r +++
  KHJ30994.1 333 KAIILRNIAE 342
                 4444444333 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 9
                 S--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH...................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...................................................... RF
    ABC_tran  35 lkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren...................................................... 79 
                 l+ ++ ei+l g+++++                           n                                                      
  KHJ30994.1 721 LDLKSHEIKLCGEQIEN---------------------------Nsstsiiqvvenmklnvsqmkddlkearkrqeqanldikriekdivdfhsnkdgk 792
                 33333333333333333...........................0222222222223333333333333334344456666666666666666644444 PP

                 ................HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHT.SSEEEEES CS
                 ................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx RF
    ABC_tran  80 ................esdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkk.pkllllDE 134
                                    ++++++ +kl+   l+ +   + +s LS  q q   + ++ll++ +++ +lDE
  KHJ30994.1 793 lielqtsldllrksltSNLRNFKDLQKKLQEARLDLE---QAGSDLSTTQDQLHDIEQILLTQdKEIHILDE 861
                 4444444443333332222224444444443333222...335**************99887626799***9 PP

  == domain 4  score: 10.3 bits;  conditional E-value: 0.00037
                  HHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHH....HHTSSEEEEES CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxx RF
    ABC_tran   86 ekalsklglkelkdtvvksspssLSgGqkqrvalaral....lkkpkllllDE 134 
                  +++ + l+ k    +v+k+s +++SgGq++ +al  ++    +k +++++lDE
  KHJ30994.1 1064 KTINDGLEFKVSLGNVWKQSLTEFSGGQRSLIALSLIMallqFKPAPMYILDE 1116
                  334444444446667777777*********98875443112267899*****9 PP

>> HSBP1  Heat shock factor binding protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.8       3.1   6.2e+03       5      15 ..     125     135 ..     124     140 .. 0.59
   2 ?   12.3   1.5   5.7e-05      0.11      11      48 ..     971    1008 ..     968    1010 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 3.1
       HSBP1   5 avVenlLqqlq 15 
                 + V+nl+q +q
  KHJ30994.1 125 QTVQNLFQSVQ 135
                 45666666665 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 5.7e-05
       HSBP1   11 LqqlqdkFqtmsdqilsriDdMssriDdLEksiadlmt 48  
                  L +l+++Fq m ++i  ++ +M   ++  E s++++m+
  KHJ30994.1  971 LRNLSERFQGMKKKINPKVMNMIDSVEKKEVSLKNMMK 1008
                  899*******************9999999999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2299  (0.128228); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        92  (0.00513135); expected 17.9 (0.001)
Passed Fwd filter:                        49  (0.002733); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.63u 0.35s 00:00:01.98 Elapsed: 00:00:00.53
# Mc/sec: 6748.06
//
Query:       KHJ30995.1  [L=880]
Description: putative voltage gated chloride channel [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.1e-83  278.6  27.0    8.1e-83  278.6  27.0    1.7  2  Voltage_CLC  Voltage gated chloride channel


Domain annotation for each model (and alignments):
>> Voltage_CLC  Voltage gated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1     0.047   8.4e+02     202     221 ..     174     197 ..     156     271 .. 0.48
   2 !  278.6  27.0   4.5e-87   8.1e-83      17     353 ..     316     688 ..     307     689 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.047
                  HHHHHHHHHHHHHHHCCCS....C CS
  Voltage_CLC 202 krlepalvgllvgllglll....p 221
                   +++ a+vg++++++++l+     
   KHJ30995.1 174 GYILSAIVGFFTATVAYLInvseT 197
                  445778888888888887732220 PP

  == domain 2  score: 278.6 bits;  conditional E-value: 4.5e-87
                  GSC-SHHHHHHHCTTSS--..-HHHHHHHHHHHHHHHHCTT-S-BTHHHHHHHHHHHHHHHHHH.TT.--SHHHHH.HHHHHHHHHHHHHHT-HHHHH CS
  Voltage_CLC  17 aagsGipevkaalngvkgp..lslrvllvkflasvltvgsGlslGreGplvqiGAavgsglsrl.lklsrndrdrr.lvaaGaAAGiAAaFnaPlgGv 110
                   agsG+ ev+ +l+g+  +  l +r+l++k la+vl+++sGlslG+eGp+v+i++++g++ +rl  k+++nd + r +++a+aAAG+A+aF+aP+gG+
   KHJ30995.1 316 VAGSGVAEVRVILSGFVLHrfLGVRTLVIKSLALVLSISSGLSLGKEGPFVHIATCIGNIACRLfSKYEDNDGKLReVLSAAAAAGVAVAFGAPIGGI 413
                  369*************9999******************************************994445888888888********************* PP

                  HHHCTTTSTSS--TTHHHHHHHHHHHHHHHHHHCTTS-S....-.T---...--GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCHHHHHHH CS
  Voltage_CLC 111 lfalEevsrefslrallpvfvasvvaalvlrlllgeepa....fgeveslfalsllelilfvllGilgGllgalfvrlllkverlfrkleklkikkrl 204
                  lf+lEev+  f+ ++l+++f++s++aal+l++l+ + ++    f+ +  + +++++el++f+l+GilgG +ga+fv+ ++ +++ +r l  +k +  l
   KHJ30995.1 414 LFSLEEVAFFFTAKTLFRTFFCSIIAALTLKFLNPYGTNkivmFE-IRYVRDWQFFELVAFILIGILGGGFGAFFVKASRLWAYKVRPL--MKNWHLL 508
                  *********************************988877788777.888889*******************************999998..5777788 PP

                  HHHHHHHHHHHHCCCSC.C...CSSSSCCHHHHHCTT-S-...................HHHHHH...HHHHHHHHHHHHHCTT-CSBSHHHHHHHHH CS
  Voltage_CLC 205 epalvgllvgllglllp.a..svlgggyeliasllegstl...................llsllllllllllkllataltlgsgvpgGifaPsLviGA 280
                  e++lv+l++g+++++ p +  s+++  y+l++       +                   +l++  l+++ll+k+l+ + t+g++vp+Gi++P LviG+
   KHJ30995.1 509 EVFLVALVTGAISFWNPlTklSAVQLLYNLAS-------PcgldrpqdlglcplsedkiILTIYRLITALLIKVLLIVTTFGIKVPAGIYVPALVIGG 599
                  ****************9431223333333322.......12223444677777777777*************************************** PP

                  HHHHHHHHHHHHH-C...............TSSC....HHHHHHCCTHHHHHCCS-HHHHHHHHHHCC--GCCHHHHHHHHHHHHHHHC CS
  Voltage_CLC 281 alGrlvglvlalllp...............gaass.dpgafalvGmaaflagvtrapltaiviviEltgdlelllplmlavliAkavad 353
                  + Gr++g+++++l+                +  s+ +pg++alv+++++++gvtr+++t++vi++E+tg+l ++lp  la+l+Ak++ad
   KHJ30995.1 600 LGGRIIGHLMQILVMrfstlpifkncaadtSGLSCiTPGVYALVAAGSTMCGVTRLSVTLAVILFEITGSLGYVLPCSLAILVAKWTAD 688
                  *************88999999*********889999***************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (880 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.42
# Mc/sec: 6266.45
//
Query:       KHJ30996.1  [L=302]
Description: putative exosome complex exonuclease rrp45 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-21   76.2   0.0    4.4e-21   75.8   0.0    1.2  1  RNase_PH    3' exoribonuclease family, domain 1
      1e-07   31.8   0.0    2.2e-07   30.8   0.0    1.6  1  RNase_PH_C  3' exoribonuclease family, domain 2


Domain annotation for each model (and alignments):
>> RNase_PH  3' exoribonuclease family, domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.8   0.0   4.9e-25   4.4e-21       1     132 []      32     164 ..      32     164 .. 0.94

  Alignments for each domain:
  == domain 1  score: 75.8 bits;  conditional E-value: 4.9e-25
                 EEEEEEEEESSSSTTSEEEEEEECCEEEEEEEEEEEEEE-TCCG--CCEEEECCCCECCCCEC-C...S...HHHHHHHHHHHHHHCCTC-C....... CS
    RNase_PH   1 elRslsietgvlsqanGSaylelGdtkvlasvtgpieerpseerddaegaldveveyapfasgerrregrpsdeeielsrlleralrpsill....... 92 
                 e+R l+i +g    + G + l+lG t +l+ ++++ ++ p  +  ++eg ++v  e++p+a +  +  gr s+ e+++srlle+++r+s+ l       
  KHJ30996.1  32 EFRHLEIDFG---GSYGVVDLRLGGTRILTEISAELTQ-PHSD-RPFEGMFSVVTELSPMAFPHLEP-GRSSQNEMLISRLLEKTIRRSGALspeslcl 124
                 7999999999...99*********************98.6666.56789************999966.9**********************88888888 PP

                 .CGCCTCEEEEEEEEEECCCS-CHHHCHHHHHHHHHCTCEE CS
    RNase_PH  93 .ekkpkstididitvlssdggslldalinaaslALadagip 132
                   ++ ++ i+ di+vls+dg +++da+++a+ +AL++++ p
  KHJ30996.1 125 iAGQTCWSIRADIHVLSADG-NIIDAASLAIVAALVHFKKP 164
                 899*****************.***************99876 PP

>> RNase_PH_C  3' exoribonuclease family, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   2.5e-11   2.2e-07       3      66 ..     192     264 ..     190     265 .. 0.89

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 2.5e-11
                 -EEEEEEEET......TE...EEES--HHHHHHSSEEEEEEEETTSEEEEEEEECSSCEEHHHHHHHHHHHHH CS
  RNase_PH_C   3 viavtvgkvd......dq...fvlDptkeEedlsegdltlavagtkevvtlmkeggsqldeetlleaielAkk 66 
                 + +vt+++        ++   +++D t  Ee++++g +t+ ++ ++e++++ k gg +++ e +l+++ lA++
  KHJ30996.1 192 PLCVTFSFYQsniegsEKaevMLVDTTEMEEHMRSGYMTVGLNRHGEICQVAKFGGIPVNVELILKCFSLASE 264
                 889999999866776622566*************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       321  (0.017904); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2223.62
//
Query:       KHJ30997.1  [L=556]
Description: putative ctp synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.9e-110  368.3   6.5   5.9e-110  366.7   6.5    1.7  1  CTP_synth_N    CTP synthase N-terminus
    3.6e-57  193.2   0.0    5.6e-57  192.6   0.0    1.3  1  GATase         Glutamine amidotransferase class-I
    2.6e-05   24.1   0.1      0.031   14.0   0.0    2.6  2  Peptidase_C26  Peptidase C26


Domain annotation for each model (and alignments):
>> CTP_synth_N  CTP synthase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  366.7   6.5  9.9e-114  5.9e-110       1     265 []       2     258 ..       2     258 .. 0.97

  Alignments for each domain:
  == domain 1  score: 366.7 bits;  conditional E-value: 9.9e-114
                  EEEEEEE--STTTTHHHHHHHHHHHHHCTT--EEEEEEE-SSSSSSTT--CCCC--EEE-TT--EEETHHHHHHHHHT----GGGEEEHHHHHHHHHH CS
  CTP_synth_N   1 kyilvtGGvvSglGkGiiaaslgallksrglkvtlikiDPYlnvdagtlsplehGEvfvlddGaetDlDlGnYeRfldikltkennittGkiyksvie 98 
                  ky+lv+GGv+Sg+GkG+i            ++vt+ikiDPYlnvdagt+sp+ehGEvfvl+dG+e+DlDlGnYeR+l+i+lt+ennittGkiy++vie
   KHJ30997.1   2 KYVLVSGGVISGIGKGVI------------VHVTSIKIDPYLNVDAGTMSPTEHGEVFVLNDGGEVDLDLGNYERYLNITLTRENNITTGKIYQHVIE 87 
                  8***************99............58****************************************************************** PP

                  HHHTTTTTT----CCCHHHHHHHHHHHHHH.H.C....T.-SEEEEEE-S-TTSGGGHHHHHHHHHHHHHH-TTTEEEEEEEE--B-TTTSSB-HHHH CS
  CTP_synth_N  99 kerrGdylGktvqviphvtdeikeriekvakk.v....e.advviveigGtvgdieslpfleairqlklelgkenvllihvtlvpvlkaagelktkpt 190
                  kerrG+ylGktvqv+ph+td+i+++ie+v+++ v    + +d++i+e+gGtvgdies+pf+ea+rqlk ++ ken+l+ihv+lvpv++  ge+k+kpt
   KHJ30997.1  88 KERRGNYLGKTVQVVPHLTDAIQDWIERVSRIpVdetgQcPDICIIELGGTVGDIESAPFIEAMRQLKRRVRKENFLQIHVSLVPVIQ--GEQKSKPT 183
                  ******************************9866766537***********************************************6..******** PP

                  HHHHHHHHHHT---SEEEEEESS---HHHHHHHHHHCT--GGGEEEEE--S-GGGHHHHHHHCTHHHHHHHHTT- CS
  CTP_synth_N 191 qhsvkelrslGiqpdiivcrsekeleeevkekialfcnvekeavisvkdvesiyevpllleeqglaelileklkl 265
                  q++++++ ++G+ pd+i+cr++ +le+++ +kia+fc+ve e+vi v++v+s+y+vpllle+qgl ++i + l+l
   KHJ30997.1 184 QQAIRDVGRAGLVPDLIACRCDVPLEKSTIDKIAMFCQVEPEQVIGVHNVSSTYHVPLLLEKQGLVSTISSILRL 258
                  *********************************************************************999876 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.6   0.0   9.4e-61   5.6e-57       2     189 ..     303     540 ..     302     541 .. 0.96

  Alignments for each domain:
  == domain 1  score: 192.6 bits;  conditional E-value: 9.4e-61
                 EEESSTSTHHHHHHHHHHTT-EEEEEETTSHHHHH.............HHTHHSTSEEEEEEESSCTTTTTHHHHHHHHCTSTS-EEEETHHHHHHHHH CS
      GATase   2 liDnydsvtenlvhalvelgvkvevvpidasaeei.............lellknpdgilvsgGpgspgvegkieaikearenkiPiLGICLGmQllaie 87 
                 l D+y sv+++l+h++++++ k+++ ++das++e+             ++  +++ gi+v+gG+gs+g+eg+i+a+++ar+nkiP+LG+CLGmQ+++ie
  KHJ30997.1 303 LHDSYLSVIKALEHSAMHCKKKLKLSWVDASHLEEkcrfddpasfhkaWHVICTACGIIVPGGFGSRGTEGMIKATEWARTNKIPYLGVCLGMQIAVIE 401
                 68*****************************99999*******9876655689********************************************** PP

                 TTTEEE......................EEECEEEEEEEEEEEETTT...........CGGTTTTSEEEEEEEEEEEEESG...CHHHTTEEEEEEEET CS
      GATase  88 fgrkvv......................kekekehhggtmrlgddet...........allyglknevierhrHryevnpk...elepaglevtaksed 150
                 f+r+v                       +e +k ++ggtmrlg ++t           +++y++++++ erhrHrye+np+   +l +agl++++k+e+
  KHJ30997.1 402 FARNVCgfsgassveidpnceepvviymPEIDKVNMGGTMRLGLRSTvlqddtewsrvRKTYNNQKQILERHRHRYEINPEyvgKLSDAGLKFVGKDEK 500
                 ***8888888888889999999999***999*************999**************************************************99 PP

                 TEEEEEEEEETT.T.EEEESSBTTSTTSTTHHHHHHHHHHH CS
      GATase 151 deelmeiiekkn.p.fvgvQFHPEststpegpellfnflik 189
                 + e+mei+e+++ p +vgvQFHPE+ s+   p+++  ++i+
  KHJ30997.1 501 G-ERMEIVELEDhPwYVGVQFHPEYLSKVLSPSPPYLGFIA 540
                 8.8********************************999986 PP

>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.1   0.00058       3.5     101     119 ..     381     399 ..     373     407 .. 0.83
   2 !   14.0   0.0   5.2e-06     0.031     182     216 .]     489     523 ..     434     523 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00058
  Peptidase_C26 101 alergvPilgiCrGlqlln 119
                    a ++++P lg+C+G+q+  
     KHJ30997.1 381 ARTNKIPYLGVCLGMQIAV 399
                    56789***********865 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 5.2e-06
  Peptidase_C26 182 aeelrveAvae.DgviEaieseeakafvlgvQwHPE 216
                    + +l+ +  +e  + +E +e+e+++ +++gvQ+HPE
     KHJ30997.1 489 DAGLKFVGKDEkGERMEIVELEDHP-WYVGVQFHPE 523
                    567888888885668********88.*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (556 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 3671.43
//
Query:       KHJ30998.1  [L=419]
Description: putative 5-azacytidine resistance protein azr1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-10   40.4   0.1    4.6e-06   26.5   0.1    2.5  2  PP2C      Protein phosphatase 2C
    1.5e-08   34.8   0.0    3.5e-07   30.3   0.0    2.2  2  SpoIIE    Stage II sporulation protein E (SpoIIE)
    3.8e-05   23.4   0.0    7.5e-05   22.5   0.0    1.5  1  PP2C_2    Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PP2C  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.1   7.6e-10   4.6e-06      98     141 ..     205     250 ..     174     254 .. 0.88
   2 !   11.4   0.0     3e-05      0.18     190     233 ..     276     321 ..     261     352 .. 0.79

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 7.6e-10
                 CT-EEEEEEEEEETTE.EEEEEESS-EEEEEETTEEE.EECS---S CS
        PP2C  98 sksGstavvalirgtk.lyvAnvGDSravLcrkgnak.keltedHk 141
                    Gsta va+ r++  l vAn+GDS  vL r+++ + +++ ++H 
  KHJ30998.1 205 TAGGSTACVAVARNNGtLEVANLGDSGYVLLRSNHVHsHSIPQTHS 250
                 568************99******************99888888886 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 3e-05
                 SB---EEEEEEE-TT..EEEEEEE-HHHHTTSHHHHHHHHHHHHHH CS
        PP2C 190 vsaePdvtsvkltee..defliLacdGlwdvlsdqeavdlvrdele 233
                 ++ +P++  ++ ++    + li+++dGlwd l + ++  +v + + 
  KHJ30998.1 276 FQDAPEMANITENNLmhGDVLIIGSDGLWDNLFYSDILKIVSQAML 321
                 55666666444444434679********************998775 PP

>> SpoIIE  Stage II sporulation protein E (SpoIIE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.0   5.9e-11   3.5e-07       3     139 ..     137     310 ..     135     357 .. 0.82
   2 ?    2.3   0.0     0.023   1.4e+02     162     190 ..     382     411 ..     360     413 .. 0.68

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 5.9e-11
                 TEEEEEEEECSS....SSHHHHHHHHHHHHHHHHHHHTTTS.........HHHHHHH.HHHHCHCTTSTT.TTCEEEEEEEETTTTEEEEEEESSSSEE CS
      SpoIIE   3 grlalvvgDvvG....hGleAalimgllrsalrelatagle.........paevlkr.lnralardleeeerfaTavlavydpstgkleyanaGhpppl 87 
                 ++++++++D+vG     G++ a ++  ++  ++  a+   +            +++   n++ ++++ ++  + Ta++av   ++g+le+an+G++  +
  KHJ30998.1 137 QDIVMGIADGVGgwadSGVDPADFSHGICHYMKYVASTYEKenwngsdlhARSLMRYgYNELCHDQFVTA-GGSTACVAV-ARNNGTLEVANLGDSGYV 233
                 6788899999999999999999999999999988884444458888888644444441455555666666.********9.9***************** PP

                 EEETTS...TEEEEE--SS--..TTTSSS..................T-EEEEEEE--TTEEEEEESCCCCSSS..H CS
      SpoIIE  88 lvrpdg...gtklllastglp..lGilpe..................adyetaelelepgdtlllyTDGvtEar..d 139
                 l+r+++   +   +++s++ p  l+i+p                   + +  +e  l  gd+l++ +DG+ ++   +
  KHJ30998.1 234 LLRSNHvhsHSIPQTHSFNTPfqLSIVPReiilqtslfgsahfqdapEMANITENNLMHGDVLIIGSDGLWDNLfyS 310
                 ****999988999999*****************************9999999*******************997633 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.023
                 HCCHHHHHHHHHHH.HTTSSSSS-EEEEEE CS
      SpoIIE 162 leelldalveelle.lgsgeleDDitllvl 190
                    +++++ ++l +   +g+++DDi+++v+
  KHJ30998.1 382 DGPFSREVKKKLPNmYFRGGKTDDICVIVA 411
                 55677778888888633579********97 PP

>> PP2C_2  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   1.3e-08   7.5e-05      13     184 ..     125     311 ..     122     360 .. 0.69

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 1.3e-08
      PP2C_2  13 qDala.vwtdsggsll.aVaDGaGSakrSerG....ariaveavvealaelleseeeeeeallraleaailadvlkeeaeaqdaelkdyatTllaav.v 104
                 qDa++ +++ ++++++  +aDG+G  + S++     ++ +++ +    +++ ++ +  ++  +r+l++  +    +e +  +d+ + + ++T  +av +
  KHJ30998.1 125 QDAFFvSKIGKSQDIVmGIADGVGGWADSGVDpadfSHGICHYMKYVASTYEKENWNGSDLHARSLMRYGY----NELC--HDQFVTAGGSTACVAVaR 217
                 9****8888888889867******98888887556666666666555555555555555555555555555....3334..677677777776666626 PP

      PP2C_2 105 tpdeivalqiGDGaivvrdrdgevqllgepdsgeyanq..ttfltsedaeeel..............rirrlkledgdalllmTDGlanslrdeer 184
                   ++++++++GD++ v+  r + v++ + p+++ +        +++e +++++              +i++ +l  gd l++ +DGl ++l  +++
  KHJ30998.1 218 NNGTLEVANLGDSGYVL-LRSNHVHSHSIPQTHSFNTPfqLSIVPREIILQTSlfgsahfqdapemaNITENNLMHGDVLIIGSDGLWDNLF-YSD 311
                 678899*********65.778888888888775554322255555555555555566666666655566666678899********998886.333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 2981.92
//
Query:       KHJ30999.1  [L=124]
Description: putative pop1-like nucleolar ribonuclease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0027   17.8   9.3     0.0032   17.6   9.3    1.1  1  HC2       Histone H1-like nucleoprotein HC2


Domain annotation for each model (and alignments):
>> HC2  Histone H1-like nucleoprotein HC2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   9.3   1.8e-07    0.0032      29      88 ..      15      73 ..       5      88 .. 0.41

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 1.8e-07
         HC2 29 aakktvvrKvaaKKtaarKtvakktvakkkvaakkaaakkaavkkavakkvvakkkvakK 88
                a +k++  Kva  K+a  K va+++va+ kva+ kaa++ a+ k + +  ++a++ v +K
  KHJ30999.1 15 ANEKVANEKVANEKVANEK-VANEKVANEKVANEKAATRFATNKIVYTDNQAAARVVNRK 73
                3333333333333332222.3333333333333333333333333333333333322222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1453  (0.0810419); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.27s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 963.63
//
Query:       KHJ31000.1  [L=815]
Description: putative ubiquitin ligase subunit protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.1e-163  545.2  14.3   2.7e-163  544.9  14.3    1.1  1  Cullin           Cullin family
    1.2e-24   86.1   2.1    1.2e-24   86.1   2.1    2.6  3  Cullin_Nedd8     Cullin protein neddylation domain
  ------ inclusion threshold ------
       0.13   12.4   0.9        7.3    6.8   0.0    2.9  2  TPR_22           Tetratricopeptide repeat
       0.24   11.8   2.4       0.35   11.2   0.1    2.6  3  Penicillinase_R  Penicillinase repressor


Domain annotation for each model (and alignments):
>> Cullin  Cullin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  544.9  14.3  6.1e-167  2.7e-163       3     618 .]      74     716 ..      72     716 .. 0.96

  Alignments for each domain:
  == domain 1  score: 544.9 bits;  conditional E-value: 6.1e-167
      Cullin   3 kleeaiqeilkknvsklsfeelYravynlvlskekkqgekLydklkelieehlkellkell...keesdeelLkalkkeWedhktsmkmirdifmyldr 98 
                  +++a+++i++++ +k+ fe l r+v+ l++   +  +e+L++++ e+i+ +l+++  +++   +++ + e L+++ k W +++++++++r+i+ yldr
  KHJ31000.1  74 DIDSALTSIFANEHPKSPFETLCRGVELLCR---RGCAEELFKRYHERIKFYLEKVMLPQIeeeTKSLHAETLRTVYKYWMEWNKQSTLLRSIYCYLDR 169
                 6899***************************...899**********************996555555555**************************** PP

      Cullin  99 vy...vkklpsvydlglelfrdhvfr.......iklkdrlieallkliekeReg..evidrsllksviemlvelgedsedkkvYeeeFekafleateef 185
                 +    +k++p ++dl +++fr+ vf        ++l +++i+++++l++++R+   ev+d++ll++ i+ml+ +        +Y + Fe++fle ++ef
  KHJ31000.1 170 SLllnSKEYPRMEDLNIQQFRSIVFTkgksandQRLGEKVISNICDLVNYKRTRqlEVFDSALLRQSIQMLHIF-------GIYSKLFEPEFLERSREF 261
                 886645599****************55******999****************98889999************99.......69**************** PP

      Cullin 186 YraeaeellaensvaseYlkkaeerleeEeervek.yldsstkkkllevleeelikkhleelleee.lkklledekledLkrlykllsrvdgleeLrka 282
                 +    ++  +    +++Y++ +++ l++E   +++  +ds+tkk ll+++++ li   +e ll+e+ ++kl+++++++ Lk lyklls  + + +L+  
  KHJ31000.1 262 FLTFTASHSNA--GIKQYIHACDKVLAQEILCCDTfNFDSTTKKSLLDLVHQYLIIGCTEILLDESeIAKLIDENSMSTLKILYKLLSISGIQGKLKAP 358
                 ***88888885..588*******************669***************************88*****999**************99999***** PP

      Cullin 283 leeyikeegkaivkdakekektedakkyveklLelkdkfdklvkeafnndkefekaldeafeefvnknkv.......nsksaellakYiDelLkkglkg 374
                 + +yike+g++iv +       e+ ++++ +lLelk+ ++k++++ fnnd++f  +l+e+f++f+n+nkv       +sk+ e +akY+D+lL+ glk+
  KHJ31000.1 359 FINYIKEKGSQIVCN------VEKVEEMIIRLLELKKLLEKIIRDTFNNDETFFFSLRESFSDFMNDNKVlvvwgtrSSKVGEKIAKYMDMLLRGGLKA 451
                 *************98......7889*******************************************99***************************** PP

      Cullin 375 l........................seeeleekldkvlvlfryiedKDvFekyYkkhLakRLllgksasddaEksmiskLkeecGseftskLegMfkDi 449
                 +                        +++el+++l+++l lfr++e+KD+Fe++Ykk+La+RLl+g+sas daE++m++kLk+ecG++ft++Le+MfkD 
  KHJ31000.1 452 VpqslisntygskssekqeysdtrdEDAELDRQLEHALDLFRFVEGKDLFEAFYKKDLARRLLMGRSASYDAERNMLAKLKNECGFTFTHNLEQMFKDQ 550
                 ************************99************************************************************************* PP

      Cullin 450 klskdlnkefkeyleeekkkkkkvdlsvkVLtagaWpterskesevsvklpeeledlieeFeefYkskhsgrkLtWlhslgsaelkatfpkkkyelqvs 548
                 ++s+d + +++++l+++   k ++dl+v+VL a+aWp++++ +    v+lp+e+++ ie+F +fY +khsgr+L W+h l++  +ka+f+k+ +el vs
  KHJ31000.1 551 EISRDEMFAYRQSLSNSGGGKPRLDLHVNVLCAAAWPSYPDVK----VNLPPEVAKQIESFDSFYIKKHSGRRLAWKHFLAHSVVKAKFNKGYKELLVS 645
                 ****************9999999**************999965....********************************************988***** PP

      Cullin 549 tfqmvvLllFnd..eeeklsyeeiqeatglpekeLkrtLqsLavakkarvLlkepkskdveptdefsvNaeF 618
                 +fq++vL+lFnd  ++e lsy  iq atgl + +L+rtLqsLa+ak  rvL+k+pk +dv+ td+f+vN +F
  KHJ31000.1 646 AFQAIVLVLFNDveSTEPLSYTTIQHATGLADVDLERTLQSLACAK-FRVLTKHPKGRDVHHTDTFTVNLNF 716
                 ***********988779*****************************.********77************998 PP

>> Cullin_Nedd8  Cullin protein neddylation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       1.4   6.3e+03      50      61 ..     248     259 ..     245     260 .. 0.85
   2 ?   -4.1   0.2       3.8   1.7e+04      35      53 ..     368     386 ..     363     391 .. 0.72
   3 !   86.1   2.1   2.6e-28   1.2e-24       1      60 [.     747     806 ..     747     808 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.4
  Cullin_Nedd8  50 sLiekeYleRde 61 
                   +L e e+leR+ 
    KHJ31000.1 248 KLFEPEFLERSR 259
                   68999*****85 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 3.8
  Cullin_Nedd8  35 krftpsiadikkrIesLie 53 
                   ++  ++++ + ++I +L+e
    KHJ31000.1 368 SQIVCNVEKVEEMIIRLLE 386
                   5667778888888877776 PP

  == domain 3  score: 86.1 bits;  conditional E-value: 2.6e-28
  Cullin_Nedd8   1 dRklaiqaaIVRiMKsrktlshneLvsevieqlskrftpsiadikkrIesLiekeYleRd 60 
                   dR++++qaaIVRiMKsrk+++h++L+sevieq++kr +++i++ik++I++Li+keYleR 
    KHJ31000.1 747 DRQYETQAAIVRIMKSRKAITHSNLISEVIEQTKKRGSVEISQIKSNIDRLIDKEYLERV 806
                   8**********************************************************7 PP

>> TPR_22  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0    0.0016       7.3      44      61 ..     712     729 ..     698     740 .. 0.87
   2 ?    2.7   0.3      0.03   1.4e+02      10      41 ..     762     793 ..     757     808 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0016
      TPR_22  44 lklsandpdyqikinsla 61 
                 ++l+ +dp+y+ikin++ 
  KHJ31000.1 712 VNLNFSDPKYKIKINQIQ 729
                 57889**********985 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.03
      TPR_22  10 grhlitpqealkkLlkilskkeqeevsklvsr 41 
                 +r+ it ++ ++++++ ++k+ + e+s++ s+
  KHJ31000.1 762 SRKAITHSNLISEVIEQTKKRGSVEISQIKSN 793
                 68889999*********************986 PP

>> Penicillinase_R  Penicillinase repressor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.9   8.5e+03      57      98 ..     466     507 ..     463     512 .. 0.79
   2 ?   -3.2   0.1       2.4   1.1e+04      80     112 ..     531     563 ..     522     565 .. 0.74
   3 ?   11.2   0.1   7.7e-05      0.35       7      64 ..     755     815 .]     750     815 .] 0.76

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.9
                      TTEEEEE----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Penicillinase_R  57 grafiYsplvseeeavasavkqlldklfegsvkelvaafvee 98 
                        +  Ys + +e+  +++++++ ld +   + k+l  af ++
       KHJ31000.1 466 SEKQEYSDTRDEDAELDRQLEHALDLFRFVEGKDLFEAFYKK 507
                      566779999999999999999999988888888888888776 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.4
                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Penicillinase_R  80 ldklfegsvkelvaafveeeklseddleeLrel 112
                      l++ ++  ++  + ++ +++++s d++ + r+ 
       KHJ31000.1 531 LKNECGFTFTHNLEQMFKDQEISRDEMFAYRQS 563
                      666777788888889999999999998766665 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 7.7e-05
                      HHHHHHHHHS-EE....HHHHHHT--GGG---HHHHHHHHHHHHHTTS-EEEEETTEEEEE- CS
  Penicillinase_R   7 evmeilwekgeat....vkevveeleeekelaysTVktllrrLvkKgllsrekegrafiYsp 64 
                      ++ +i+ +++ +t    ++ev+e+ +++ +++ s +k+ + rL +K++l+r + g +++Y++
       KHJ31000.1 755 AIVRIMKSRKAIThsnlISEVIEQTKKRGSVEISQIKSNIDRLIDKEYLERVN-GGSYVYCA 815
                      56666666666551222567888888888999*******************98.88999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (815 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1202  (0.0670422); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.23s 00:00:00.93 Elapsed: 00:00:00.40
# Mc/sec: 6170.92
//
Query:       KHJ31001.1  [L=320]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-08   33.8   0.3    6.3e-08   32.6   0.1    1.7  2  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.1   3.5e-12   6.3e-08     160     237 ..       2      81 ..       1      87 [. 0.88
   2 ?   -1.7   0.0       0.1   1.8e+03     134     166 ..     224     256 ..     210     298 .. 0.65

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 3.5e-12
       RVT_2 160 klivalyvddlliagsdikiledvkkelakkfklkdlgkvskfLGieiaq..eaggiklsladyiakvvkkfeltdaktv 237
                 k+ + +yvdd+  a++ ++ l  + + l k+f+ k+lg ++k LG+ i++  ++ +i l +++y++  +++f++t ak +
  KHJ31001.1   2 KVWILVYVDDIAAAANVTSKLVWFFEALFKRFNAKNLGGIEKILGVRITRdrKNLTIYLDQEQYLSATLDQFGITYAKHI 81 
                 57899*******************************************99434556778999*************98864 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.1
       RVT_2 134 dkvLkklgferseaesGlyvrgtgegklivaly 166
                  ++L+++++ ++   +G+ v+  g+++  +al 
  KHJ31001.1 224 AQILRDMHMPEIINSNGITVKMYGDNQGALALV 256
                 466777777777778888888888887555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2378.62
//
Query:       KHJ31002.1  [L=360]
Description: putative translation machinery-associated protein 46 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      4e-24   84.9   4.0      4e-24   84.9   4.0    3.5  3  DFRP_C     DRG Family Regulatory Proteins, Tma46
    3.1e-06   27.8  13.0    0.00028   21.5   5.4    3.5  2  Torus      Torus domain
    0.00015   21.5   2.6    0.00015   21.5   2.6    2.4  3  zf-CCCH    Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    0.00092   19.0  10.1       0.01   15.6   3.8    3.3  3  zf-CCCH_4  CCCH-type zinc finger
  ------ inclusion threshold ------
      0.037   14.1   8.3      0.037   14.1   8.3    3.3  4  zf_CCCH_4  Zinc finger domain
       0.17   12.1   4.7        2.1    8.6   1.4    2.7  2  zf-CCCH_3  Zinc-finger containing family
        0.2   12.2  12.2          4    8.1   4.5    2.9  2  zf-CCCH_2  RNA-binding, Nab2-type zinc finger


Domain annotation for each model (and alignments):
>> DFRP_C  DRG Family Regulatory Proteins, Tma46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   3.1       0.9   2.3e+03      31      42 ..      62      73 ..      52      90 .. 0.47
   2 ?    1.7   0.8      0.15   3.8e+02      64      87 ..     131     158 ..     106     160 .. 0.63
   3 !   84.9   4.0   1.6e-27     4e-24       1      89 []     234     318 ..     234     318 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.9
      DFRP_C 31 Kkkrlekkeaee 42
                K++r ++k+a+e
  KHJ31002.1 62 KAQREKEKAASE 73
                122222222222 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.15
      DFRP_C  64 pelaedddeeeeeeeee....awdleef 87 
                 ++l++d  e+ee+++++    +wd +++
  KHJ31002.1 131 KDLYQDTRENEETQKKTetseNWDEAKL 158
                 4555555555444433334447887766 PP

  == domain 3  score: 84.9 bits;  conditional E-value: 1.6e-27
      DFRP_C   1 kitLEefiEteRakLdkklTpvtletFakWKkkrlekkeaeeekeekkkkkeglsGrelfefnpelaedddeeeeee.eeeawdleefre 89 
                 ++tLE+f+E+eR+kL+  lTpvt+etF kWK++rl kk+aee++ + +k++   +Gr+lfe ++ + ++ d++e+e+ +++aw++e++r+
  KHJ31002.1 234 TLTLEDFLESERHKLTAPLTPVTPETFLKWKAERLGKKAAEEQA-RLAKEA---TGRALFE-KGAWEANIDDSENEDnSNDAWNMEQLRK 318
                 69****************************************99.999999...******9.7777776666555551456*****9985 PP

>> Torus  Torus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   5.4   1.1e-07   0.00028      67      98 ..      96     127 ..      23     138 .. 0.65
   2 !    8.9   0.9   0.00092       2.4      39      95 ..     146     210 ..     133     221 .. 0.59

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 1.1e-07
                 STT--B-HHHHHT--SSGGG-SSB-S---SS- CS
       Torus  67 ekesyfClfFarGlCakGkkCeylHrlPteed 98 
                   ++++Clf+ +G C kG+kC++ H+l   ++
  KHJ31002.1  96 DPKTVLCLFYKKGHCEKGRKCKFSHDLNVGRK 127
                 45679********************9976555 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00092
                 THHHHS-----S----HHHH----HHHHSTT--B-HHHHH....T......--SS.GGG-SSB-S--- CS
       Torus  39 kekkkkskekaktrcnikkdsGytkadkekesyfClfFar....G......lCak.GkkCeylHrlPt 95 
                 k++++++ ++ak r  +  + G  k +   + ++C +F      G      +C++ G kC y H+lP 
  KHJ31002.1 146 KTETSENWDEAKLRSVVLSKRGNQKTT---TDIVCKYFINsveeGkygwfwTCPNgGDKCMYQHKLPP 210
                 233333444666666666666666555...45888888652222333344458873589********5 PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   2.6     6e-08   0.00015       1      26 [.      97     121 ..      97     122 .. 0.95
   2 ?   -3.5   0.2       4.3   1.1e+04       6       9 ..     177     180 ..     176     180 .. 0.67
   3 ?   -1.3   0.9      0.86   2.2e+03      18      25 ..     199     206 ..     188     207 .. 0.62

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 6e-08
                 -HCHCBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH   1 yktelCrffmrtGyCkyGdrCkFaHg 26 
                 +kt+lC f+++ G+C  G +CkF+H+
  KHJ31002.1  97 PKTVLCLFYKK-GHCEKGRKCKFSHD 121
                 69*****9999.*************6 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 4.3
                 BCHH CS
     zf-CCCH   6 Crff 9  
                 C++f
  KHJ31002.1 177 CKYF 180
                 7776 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.86
                 GGG-SSBS CS
     zf-CCCH  18 GdrCkFaH 25 
                 Gd+C + H
  KHJ31002.1 199 GDKCMYQH 206
                 45665555 PP

>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   3.8     4e-06      0.01       2      22 .]     101     121 ..     100     121 .. 0.95
   2 ?    2.4   0.0     0.055   1.4e+02       2       7 ..     176     181 ..     175     188 .. 0.82
   3 ?    3.2   0.2     0.032        81      14      21 ..     199     206 ..     191     207 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4e-06
   zf-CCCH_4   2 lCpyfakGsCrfGdnCrFsHd 22 
                 lC ++ kG C  G +C+FsHd
  KHJ31002.1 101 LCLFYKKGHCEKGRKCKFSHD 121
                 899*****************9 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.055
   zf-CCCH_4   2 lCpyfa 7  
                 +C+yf+
  KHJ31002.1 176 VCKYFI 181
                 8****8 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.032
   zf-CCCH_4  14 GdnCrFsH 21 
                 Gd+C + H
  KHJ31002.1 199 GDKCMYQH 206
                 78****99 PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   8.3   1.4e-05     0.037       1      19 []     102     120 ..     102     120 .. 0.99
   2 ?   -0.1   0.3      0.43   1.1e+03       1       5 [.     177     181 ..     177     182 .. 0.85
   3 ?   -3.4   0.1       4.5   1.2e+04       8      12 ..     194     198 ..     194     198 .. 0.83
   4 ?    3.7   0.1     0.027        69      12      19 .]     199     206 ..     199     206 .. 0.96

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.4e-05
   zf_CCCH_4   1 CkfflqGtCkkGdkCrFaH 19 
                 C f+++G C kG kC+F+H
  KHJ31002.1 102 CLFYKKGHCEKGRKCKFSH 120
                 99***************** PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.43
   zf_CCCH_4   1 Ckffl 5  
                 Ck+f+
  KHJ31002.1 177 CKYFI 181
                 9**97 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 4.5
   zf_CCCH_4   8 tCkkG 12 
                 tC++G
  KHJ31002.1 194 TCPNG 198
                 79998 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.027
   zf_CCCH_4  12 GdkCrFaH 19 
                 GdkC + H
  KHJ31002.1 199 GDKCMYQH 206
                 9*****99 PP

>> zf-CCCH_3  Zinc-finger containing family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   1.4    0.0008       2.1       8      27 ..     102     121 ..      95     129 .. 0.87
   2 ?    3.4   0.0     0.035        89       9      27 ..     189     207 ..     181     209 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0008
   zf-CCCH_3   8 cyffyystctkGdscpfrhe 27 
                 c f+    c+kG +c f h 
  KHJ31002.1 102 CLFYKKGHCEKGRKCKFSHD 121
                 9999999**********995 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.035
   zf-CCCH_3   9 yffyystctkGdscpfrhe 27 
                 y ++++  + Gd+c ++h+
  KHJ31002.1 189 YGWFWTCPNGGDKCMYQHK 207
                 66777666889******96 PP

>> zf-CCCH_2  RNA-binding, Nab2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   4.5    0.0016         4       2      17 ..     102     120 ..     101     120 .. 0.90
   2 ?    7.6   0.9    0.0021       5.5       2      17 ..     177     206 ..     177     206 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0016
   zf-CCCH_2   2 Crffpn..C.tnpkCpFaH 17 
                 C f+ +  C ++ kC+F+H
  KHJ31002.1 102 CLFYKKghCeKGRKCKFSH 120
                 88888888*********** PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0021
   zf-CCCH_2   2 Crffpn............Ctnp..kCpFaH 17 
                 C++f+n            C+n   kC++ H
  KHJ31002.1 177 CKYFINsveegkygwfwtCPNGgdKCMYQH 206
                 888888888888888888977556*****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1927  (0.10748); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.41
# Mc/sec: 2654.22
//
Query:       KHJ31003.1  [L=243]
Description: putative orotate phosphoribosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-14   53.5   0.0    2.6e-14   53.0   0.0    1.2  1  Pribosyltran  Phosphoribosyl transferase domain


Domain annotation for each model (and alignments):
>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.0   0.0   1.5e-18   2.6e-14      10     134 ..      53     183 ..      47     191 .. 0.85

  Alignments for each domain:
  == domain 1  score: 53.0 bits;  conditional E-value: 1.5e-18
                   -EEEEEEETTEEEEEE......--GGGEEEEEEETTTHHHHHHHHHHS.........TT-EE-EEEEEE-TTT--EE........EE----TTSEEE CS
  Pribosyltran  10 aildavarlaaeilee......yngkpdvvvgiargGvpfakiladeL.........evplayvrkvkyrpdgseeaargssdesrlledpagkkVl 91 
                   ai++a a+ + e +++       +++ dv++g+a++G+p+a+ +  +L          + + + rk+ ++++ ++ +           + ++gk+Vl
    KHJ31003.1  53 AISKAFAHTIIEMNNTiknnpsTPFEFDVIFGPAYKGIPLATTTVAKLadlqpekykQICFSFDRKEIKDHGEGGLI---------VGAPLKGKRVL 140
                   5666677777777777333344456667**************************98777788999999999999999.........57889****** PP

                   EE-SEESSSHHHHHHHHHHHCC-BSEEEEEEEEE-HHHHHHHH CS
  Pribosyltran  92 iVDDildtGgTllaalelLkekgpeevriavlvdkpateeevd 134
                   i+DD+++ G++ ++a+e + ++g ++v+i+v +d++++  e++
    KHJ31003.1 141 IIDDVVTAGTAKREAIEKITKQGGTVVGIVVALDRMEKLPESS 183
                   ************************************9987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1954.97
//
Query:       KHJ31004.1  [L=769]
Description: putative phospholipase c [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-56  187.9   0.8    1.2e-55  187.1   0.8    1.5  1  PI-PLC-X  Phosphatidylinositol-specific phospholipase C, X do
      5e-36  123.5   0.0      5e-36  123.5   0.0    2.9  3  PI-PLC-Y  Phosphatidylinositol-specific phospholipase C, Y do
  ------ inclusion threshold ------
        1.1   10.0   3.8        1.2    9.8   0.9    2.5  2  IMUP      Immortalisation up-regulated protein


Domain annotation for each model (and alignments):
>> PI-PLC-X  Phosphatidylinositol-specific phospholipase C, X domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.1   0.8   1.9e-59   1.2e-55       2     145 .]     123     368 ..     122     368 .. 0.99

  Alignments for each domain:
  == domain 1  score: 187.1 bits;  conditional E-value: 1.9e-59
                 EEEEETTTTTTS-SHHHHHTHHHH---SS-HHHHHHTT--EEEEEE-...TT............................................... CS
    PI-PLC-X   2 saPlshyfissshntyltgnqlssessveayrnaLlrGcRcvEidvwdgedee.............................................. 54 
                 s+ ls+y+issshntyl gnql+s+s++ ay+n+L+rGcRc+E+dv +g++ +                                              
  KHJ31004.1 123 SKTLSNYYISSSHNTYLSGNQLMSRSKTGAYKNVLRRGCRCIEVDVHNGDNINiktagessyniiaatqnitsessqkkmfstkiaslidrtklkrmqr 221
                 789***********************************************99999******************************************** PP

                 .......................................................SEEEETTEEE.EEEHHHHHHHHHHHHHHSTT--EEEEEEETTT- CS
    PI-PLC-X  55 .......................................................pvvlhgytltkkikfrdvleaikdyafktselPvivsLevhcsa 98 
                                                                        p+v+hg+tlt ++ fr v++ i + afk selP+ivsLevh++ 
  KHJ31004.1 222 rpekqfanindqaedmicqgqeknlmhnssslssssvsscsddesmiesqmipgePIVMHGWTLTAPVGFRAVCKVIGQEAFKYSELPIIVSLEVHVDL 320
                 *************************************************************************************************** PP

                 THHHHHHHHHHHHGGGGB-EEETT-..------BCCCCTT-EEEEE.. CS
    PI-PLC-X  99 eqqekmaeilkeifgdlLleeplek.eeskelpspeelkgKilikvkk 145
                 eqqe+m++i+ke +gd+L++ p+ + + +++lp++e+lk+Kil+kvkk
  KHJ31004.1 321 EQQETMVKIMKEEWGDMLIQAPIPDcDPKERLPRLEQLKKKILVKVKK 368
                 ***********************998999*****************96 PP

>> PI-PLC-Y  Phosphatidylinositol-specific phospholipase C, Y domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1      0.39   2.3e+03      21      46 ..      48      73 ..      30      91 .. 0.70
   2 ?   -0.7   0.3      0.29   1.8e+03      24      53 ..     204     233 ..     183     267 .. 0.58
   3 !  123.5   0.0   8.3e-40     5e-36       1     113 [.     431     541 ..     431     543 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.39
    PI-PLC-Y 21 akkpnhvfslsesklkkllekeeekk 46
                ++ ++h+ + se++++k+l++++ ++
  KHJ31004.1 48 RNIFHHLLERSEESTNKILSQDHFEE 73
                478999999******99984443233 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.29
    PI-PLC-Y  24 pnhvfsl.sesklkkllekeeekklvkhnrr 53 
                  +++ sl + +klk++  ++ ek++++ n +
  KHJ31004.1 204 STKIASLiDRTKLKRMQ-RRPEKQFANINDQ 233
                 33333331444444553.4444445555543 PP

  == domain 3  score: 123.5 bits;  conditional E-value: 8.3e-40
    PI-PLC-Y   1 lsdlvvytqsvkf.ksfekpeakkpnhvfslsesklkkllekeeekklvkhnrrhlmRvyPkgtrvdssNlnpvefWnvGvqmvAlnwqtldegmqlne 98 
                 ls+l+vyt+  +f +sf++++a++p+h+fs+ es l +l  k+++++l++hnr+++mR+yP++ r+dssN  p+ fW++G+q+vA+nwq+ld++++lne
  KHJ31004.1 431 LSSLGVYTHTEHFsHSFSSASAHQPTHIFSIGESDLIELD-KNQRQELFTHNRNYIMRTYPAARRIDSSNPRPILFWSRGIQIVAMNWQKLDQALMLNE 528
                 799**********779999999****************97.666667**************************************************** PP

    PI-PLC-Y  99 alFaengscGYvlKP 113
                  +Fa  +++G+vlKP
  KHJ31004.1 529 SMFA--NEQGWVLKP 541
                 ****..999*****9 PP

>> IMUP  Immortalisation up-regulated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.9    0.0002       1.2      33      68 ..     231     266 ..     215     275 .. 0.64
   2 ?   -1.4   0.1      0.62   3.7e+03      24      50 ..     638     664 ..     630     670 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0002
        IMUP  33 qGaseagaaekprhghgkssssdsssssssssdsda 68 
                 + ++e+ + + +++   ++sss ssss ss sd ++
  KHJ31004.1 231 NDQAEDMICQGQEKNLMHNSSSLSSSSVSSCSDDES 266
                 444555555555555556777777777766666654 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.62
        IMUP  24 dpkhsPkkvqGaseagaaekprhghgk 50 
                 d   sP+  +Gas ++  +++++g+g 
  KHJ31004.1 638 DTEISPENEEGASREHRGSSNNNGNGM 664
                 667789999999999998888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (769 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1059  (0.0590663); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.46
# Mc/sec: 4974.56
//
Query:       KHJ31005.1  [L=148]
Description: hypothetical protein EV44_g0430 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.026   13.0   0.0      0.026   13.0   0.0    1.1  1  Zwilch    RZZ complex, subunit zwilch


Domain annotation for each model (and alignments):
>> Zwilch  RZZ complex, subunit zwilch
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.4e-06     0.026     518     550 ..      21      52 ..       2     103 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.4e-06
      Zwilch 518 sefydkeePqswrvemssanvqkevkTvfelns 550
                 s++y ++ P+s+ v +++an+  ++ T+++l +
  KHJ31005.1  21 SAMYANR-PYSRGVRIRNANCNGRIHTSLKLAQ 52 
                 5667777.*********************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       387  (0.0215851); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.24s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 1211.34
//
Query:       KHJ31006.1  [L=414]
Description: putative elongation factor 1 gamma domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.8e-45  152.8   0.2    5.1e-45  151.9   0.2    1.4  1  EF1G            Elongation factor 1 gamma, conserved domain
    5.7e-15   55.3   0.1    5.7e-15   55.3   0.1    1.9  2  GST_C           Glutathione S-transferase, C-terminal domain
    2.5e-07   31.0   0.0    5.9e-07   29.8   0.0    1.6  1  GST_N_3         Glutathione S-transferase, N-terminal domain
    1.2e-06   28.6   0.2    4.6e-06   26.8   0.2    2.1  1  GST_C_3         Glutathione S-transferase, C-terminal domain
    1.5e-06   28.4   0.0    7.8e-06   26.1   0.0    2.2  2  GST_N           Glutathione S-transferase, N-terminal domain
    5.2e-05   23.2   0.0    0.00013   21.9   0.0    1.7  1  GST_C_2         Glutathione S-transferase, C-terminal domain
    0.00041   20.6   0.0      0.012   16.0   0.0    2.3  2  GST_N_5         Glutathione S-transferase, N-terminal domain
  ------ inclusion threshold ------
       0.06   13.7   0.0        0.5   10.7   0.0    2.3  2  GST_N_2         Glutathione S-transferase, N-terminal domain
       0.31   11.9   5.3       0.55   11.1   5.3    1.3  1  HABP4_PAI-RBP1  Hyaluronan / mRNA binding family


Domain annotation for each model (and alignments):
>> EF1G  Elongation factor 1 gamma, conserved domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.9   0.2   2.5e-48   5.1e-45       1     107 []     253     358 ..     253     358 .. 0.99

  Alignments for each domain:
  == domain 1  score: 151.9 bits;  conditional E-value: 2.5e-48
        EF1G   1 kakdplaalpkskfvldewKrkYsnedteekalkyfwenfdkeeyslwkveYkyneeltktfmssnliggffqrleklrkyaFgsvvvfgennnseisG 99 
                 k k+pl++lpk ++ ldewKr+Ysn+dt + alk+fwen+++eeyslwk++Ykyn+elt++fmssnliggff rle++rky+Fg ++v+g +++s i+G
  KHJ31006.1 253 KVKHPLESLPKPTLALDEWKRQYSNNDT-SDALKWFWENYKPEEYSLWKLDYKYNNELTQVFMSSNLIGGFFARLEASRKYIFGAASVYGVKDDSVIQG 350
                 679************************9.99******************************************************************** PP

        EF1G 100 vwlfrGqe 107
                 ++l+rGq+
  KHJ31006.1 351 AFLIRGQD 358
                 ******97 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.3   0.1   2.9e-18   5.7e-15       5      93 .]      91     196 ..      67     196 .. 0.91
   2 ?   -3.0   0.3       4.6   9.1e+03      17      29 ..     233     245 ..     220     262 .. 0.56

  Alignments for each domain:
  == domain 1  score: 55.3 bits;  conditional E-value: 2.9e-18
                 HHHHHHHHHSTTH................HHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSSTTSSCHHHHHHHHHHHHHHHHTTTTT.TTTSHHHHHHH CS
       GST_C   5 isqilllfyvkae................ekkeelvdealekvaevlsaleeelkkqdylvGdkltlADialvpilnwlqrlglafg.qekfpnlkawl 86 
                 +s ++++++v+++                + +++++de  +k+  + +++e +l ++++lvG++ltlADi  + il   +r+ ++ + +++ pn ++w+
  KHJ31006.1  91 ASILKWMSFVNQDisncyaswlypffgivAYNKKVYDEGVKKTLDYAQIFEDTLQNNTFLVGERLTLADIFTASILSLSFRYLFDKKwRAANPNTTRWY 189
                 5666777777777788888888888888866666***************************************************************** PP

                 HHHHTSH CS
       GST_C  87 erimarp 93 
                 e+++++p
  KHJ31006.1 190 ETVINQP 196
                 *****98 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 4.6
                 HHHHHHHHHHHHH CS
       GST_C  17 eekkeelvdeale 29 
                   kk++  +e++e
  KHJ31006.1 233 PSKKKAKEEEEDE 245
                 3333333333333 PP

>> GST_N_3  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.0     3e-10   5.9e-07      14      72 ..      19      78 ..       6      84 .. 0.87

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 3e-10
                HHHHHHHT--EEEE---TTTTHHHHHHH-TT--SSEEE.TTS-EEESHHHHHHHHHHHH- CS
     GST_N_3 14 rlaLnekglpvevvevtpgehdeellaknplgkvPvLe.ddgealtdSlaIidyLeelyp 72
                  + +  +++ e+ e+tpg++dee++++n lgk+P+++  dg +l+++ aI  y+ ++ +
  KHJ31006.1 19 IAVAKANNIELELIETTPGSTDEEYRKINKLGKIPTFVgSDGFILHETIAISIYITSQNE 78
                567788899****************************9899*************988765 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.2   2.3e-09   4.6e-06      18      90 ..     115     196 ..      63     199 .. 0.78

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 2.3e-09
                 H....HHHHHHHHHHHHCHHHH...HHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHH....TCCCC-HHHHHHHHHHHTSH CS
     GST_C_3  18 a....ekkkefleerlpkflky...fekvlkkkgggylvgdklTyADlalfqvldgleea....ealkkfpklkalyervearp 90 
                      +  k++++e ++k l+y   fe  l+  ++++lvg++lT+AD++  ++l+   +     ++ ++ p+ +++ye v ++p
  KHJ31006.1 115 FfgivAYNKKVYDEGVKKTLDYaqiFEDTLQ--NNTFLVGERLTLADIFTASILSLSFRYlfdkKWRAANPNTTRWYETVINQP 196
                 1445567788888888888887222566666..99**************999988655555753333788********999887 PP

>> GST_N  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   3.9e-09   7.8e-06       4      75 ..       5      74 ..       3      75 .. 0.81
   2 ?   -1.4   0.0       1.5     3e+03      28      52 ..     372     403 ..     370     407 .. 0.60

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 3.9e-09
                EEESSSTSHTHHHHHHHHHHTT-EEEEEEECSTTTCGGCHHHHHHCTTS-SSEEEET.TEEEESHHHHHHHHH CS
       GST_N  4 tlysirgsprahrirlllaakgveyevvpldfeageekspellklnplgkvPaLedn.gkkltESraIleYia 75
                +ly   g+pr   i ++++a ++e e ++ ++  g   ++e+ k+n lgk+P++++  g++l E+ aI  Yi 
  KHJ31006.1  5 KLYVSKGNPRGIPIIAVAKANNIELELIETTP--GS-TDEEYRKINKLGKIPTFVGSdGFILHETIAISIYIT 74
                56666677776667777778888888887776..54.479****************99*************96 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.5
                 EEEEEECSTTTCGGC...HHHHHHCTT....S CS
       GST_N  28 yevvpldfeageeks...pellklnpl....g 52 
                 ye+++ld ++ e+k+   +++++++p+    +
  KHJ31006.1 372 YEFTKLDHTKIEDKQfidDQWTWEKPItingK 403
                 66666665555554333389999999765544 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   6.5e-08   0.00013       5      68 ..     127     190 ..     123     191 .. 0.83

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 6.5e-08
                 CHHHHHCCHCHHHCTTT---SS.CTTCS--HHHHHHHHHHH.HHHHHHHS----TT-HHHHHHHH CS
     GST_C_2   5 eraleqldaaldaleahLadspflfGdqptlaDialapflv.rlraagpgfdireaypnlraWle 68 
                 ++ +++       +e+ L   +fl G+++tlaDi+ a  l   +r+ + +  +r+a pn  +W+e
  KHJ31006.1 127 DEGVKKTLDYAQIFEDTLQNNTFLVGERLTLADIFTASILSlSFRYLF-DKKWRAANPNTTRWYE 190
                 5556666666677899999999*******************5555555.889************8 PP

>> GST_N_5  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   5.8e-06     0.012       2      34 ..       5      35 ..       4      75 .. 0.76
   2 ?    2.0   0.0      0.13   2.6e+02      47      65 ..     262     280 ..     250     285 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 5.8e-06
     GST_N_5  2 klfvseGnphglkvLaaakaakgkvevqvqtvn 34
                kl+vs+Gnp g+++ a aka + + e+   +  
  KHJ31006.1  5 KLYVSKGNPRGIPIIAVAKANNIELEL--IETT 35
                8*****************988775544..4443 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.13
     GST_N_5  47 vlpvleldsgqfLFSsnai 65 
                   p+l+ld++++ +S n +
  KHJ31006.1 262 PKPTLALDEWKRQYSNNDT 280
                 569************9976 PP

>> GST_N_2  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00025       0.5      27      68 ..      33      74 ..      18      76 .. 0.83
   2 ?   -0.5   0.0      0.78   1.5e+03      47      67 ..     264     287 ..     230     290 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00025
                ..-TTSHHHHHHHHCTTTSSSEEE-CTTEEEESHHHHHHHHH CS
     GST_N_2 27 epkgfekseefprlnprgtVPvLwdkdgqvineSseIlryle 68
                e+ + ++ ee+ ++n +g++P+ +  dg ++ e+ +I  y+ 
  KHJ31006.1 33 ETTPGSTDEEYRKINKLGKIPTFVGSDGFILHETIAISIYIT 74
                456778889***************99********99988875 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.78
                 SEEE-C..TTE.EEESHHHHHHHH CS
     GST_N_2  47 PvLwdk..dgq.vineSseIlryl 67 
                 P+L ++  + q  +n++s+ l ++
  KHJ31006.1 264 PTLALDewKRQySNNDTSDALKWF 287
                 888886444456888999999987 PP

>> HABP4_PAI-RBP1  Hyaluronan / mRNA binding family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   5.3   0.00028      0.55      46     101 ..     216     276 ..     199     286 .. 0.50

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00028
  HABP4_PAI-RBP1  46 kaaekeaeeedaeeeaaeaeeaaaaeeeekeekeeee......eeeeedkemTLdEykklqe 101
                     + a+k+a++e+a ++ a +++ +a+eeee+e+++ +        e   + ++ LdE+k +  
      KHJ31006.1 216 PPAKKDAKKESAPKTPAPSKK-KAKEEEEDEDEAPAApkvkhpLESLPKPTLALDEWKRQYS 276
                     334444444455332222222.22222222222222233455344556689*******9755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1040  (0.0580066); expected 358.6 (0.02)
Passed bias filter:                      594  (0.0331307); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 3139.41
//
Query:       KHJ31007.1  [L=426]
Description: hypothetical protein EV44_g1315 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0005   20.6   6.9     0.0005   20.6   6.9    1.5  2  Fez1       Fez1
     0.0057   16.7   0.1       0.46   10.6   0.1    2.7  2  DUF1192    Protein of unknown function (DUF1192)
  ------ inclusion threshold ------
      0.033   14.6   0.5      0.033   14.6   0.5    3.0  3  ZapB       Cell division protein ZapB
      0.088   12.9   0.3       0.23   11.6   0.3    1.8  1  zf-CCHC    Zinc knuckle
      0.093   12.5   0.0       0.16   11.8   0.0    1.3  1  DUF4454    Domain of unknown function (DUF4454)
       0.42    9.9   5.3          1    8.6   5.3    1.7  1  GAS        Growth-arrest specific micro-tubule binding
       0.93    8.3   8.8      0.061   12.2   3.6    1.7  2  Spc7       Spc7 kinetochore protein
        1.7    8.4   6.1       0.78    9.5   0.2    2.5  3  DUF724     Protein of unknown function (DUF724)
        3.8    7.7  17.0        2.8    8.1  11.5    2.7  3  ATG16      Autophagy protein 16 (ATG16)
        6.1    5.6  12.6          2    7.1   7.3    2.5  2  DUF3573    Protein of unknown function (DUF3573)


Domain annotation for each model (and alignments):
>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   6.9   2.8e-07    0.0005      15     142 ..      68     194 ..      64     207 .. 0.76
   2 ?   -3.2   0.0       5.2   9.4e+03     134     146 ..     302     314 ..     277     345 .. 0.59

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 2.8e-07
        Fez1  15 LKqQLkdsqaevtqklseivalkaqlrelrakleekeeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeea 113
                 +K QL  + +  ++ +se+v+++++  el+++++  ++ei +l++s+++k++         +  +++   l++kv++l++e ++l  + +++s++++e 
  KHJ31007.1  68 MKAQLESYNSRNSKSASELVQVQGEATELNKAISLAQQEILHLSQSSSQKSAARSPFSGHND--NDKIAKLNDKVSTLQAEYNRLPATHNTSSTKNSEV 164
                 79***********************************************9999777777655..5567889**************99777766655554 PP

        Fez1 114 alesdeakaqrqe..aeeleelkreverlra 142
                 + + +++ka+r++   ee +  k+++e+ + 
  KHJ31007.1 165 N-DGSASKARRTRsdPEEFSGTKKDTEKRQM 194
                 4.44444555444225666666666665444 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 5.2
        Fez1 134 kreverlraeLke 146
                 ++++++l+a  ++
  KHJ31007.1 302 QEHIAKLQAPTST 314
                 2222222222222 PP

>> DUF1192  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.1   0.00025      0.46      23      51 ..      94     122 ..      93     123 .. 0.94
   2 ?    2.9   0.0     0.064   1.2e+02      23      45 ..     134     156 ..     132     164 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00025
     DUF1192  23 eELeerIalLeaEIaRleaaiakkkasra 51 
                 +EL++ I+l ++EI +l++  ++k+a r+
  KHJ31007.1  94 TELNKAISLAQQEILHLSQSSSQKSAARS 122
                 69***********************9986 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.064
     DUF1192  23 eELeerIalLeaEIaRleaaiak 45 
                 + L++ +++L+aE  Rl a+  +
  KHJ31007.1 134 AKLNDKVSTLQAEYNRLPATHNT 156
                 6699************9887665 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.5      0.63   1.1e+03      29      47 ..      88     106 ..      65     124 .. 0.50
   2 ?   14.6   0.5   1.9e-05     0.033      11      46 ..     131     180 ..     130     206 .. 0.77
   3 ?   -0.5   0.1      0.95   1.7e+03      18      33 ..     303     318 ..     288     338 .. 0.59

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.63
        ZapB  29 eLkeeneelkeenreleee 47 
                 +++ e  el++ +   ++e
  KHJ31007.1  88 QVQGEATELNKAISLAQQE 106
                 3333333333333333333 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 1.9e-05
        ZapB  11 skiqkaidtitlLqmeieeLkeeneelkeenrele..............e 46 
                  ki k+ d++++Lq e+ +L + +++ + +n e++              e
  KHJ31007.1 131 DKIAKLNDKVSTLQAEYNRLPATHNTSSTKNSEVNdgsaskarrtrsdpE 180
                 699*******************************9977744444444442 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.95
        ZapB  18 dtitlLqmeieeLkee 33 
                 + i++Lq   +  ++ 
  KHJ31007.1 303 EHIAKLQAPTSTIQQN 318
                 2233333333333333 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.3   0.00013      0.23       3      15 ..     354     366 ..     352     366 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00013
                 TSSSSSSSSTTTT CS
     zf-CCHC   3 CynCGepGHiard 15 
                 C  CG+ GHia+d
  KHJ31007.1 354 CVACGNSGHIAKD 366
                 667*********9 PP

>> DUF4454  Domain of unknown function (DUF4454)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   8.7e-05      0.16      64     144 ..     222     301 ..     205     335 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 8.7e-05
     DUF4454  64 qleavleGgevrvvlneltgesrmlslnpnaspyGdgyllydaGeesakqgnedaisadlesgeytlWedsadtvlktvyk 144
                  + + +  g++ +++++ t + ++  l +++s yGd +  +d   e ak+   + ++  + s++yt W d  +t+ +++ +
  KHJ31007.1 222 SYITSQPSGKAWLAVQDGTAKNALDTLFQGKSAYGDFIADFDHLAEMAKYDDRTKVNL-PASNNYTGWSDMINTIARNLQQ 301
                 566667778889999999********************************99998876.6789************999765 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   5.3   0.00058         1      31     128 ..      68     153 ..      64     206 .. 0.62

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00058
         GAS  31 lKeeieelkkkeernekelseisqenkrlkepLkkaeeeveeLrkqlknyekdkqsl..knlkarlkelekelkdlkwehevleqrfekvekerdelyk 127
                 +K ++e  + ++ +   el +++ e  +l++ +  a++e+ +L +   + +  ++ +   n + ++ +l++++++l+ e++ l                
  KHJ31007.1  68 MKAQLESYNSRNSKSASELVQVQGEATELNKAISLAQQEILHLSQSSSQKSAARSPFsgHNDNDKIAKLNDKVSTLQAEYNRLPA-------------- 152
                 5666666666666666666666666666666666666666666665555554444331134445555555555555555554433.............. PP

         GAS 128 k 128
                 +
  KHJ31007.1 153 T 153
                 3 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   3.6   3.4e-05     0.061     200     282 ..      64     147 ..      48     205 .. 0.91
   2 ?   -2.6   0.2       1.1     2e+03     178     213 ..     307     347 ..     289     351 .. 0.52

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.4e-05
        Spc7 200 eLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwsese.vsrlkeevkaleelt 282
                 +  e++ +l++ ++  ++   el ++q + +el+++i+ +++++ +l +  +++   +    g+++++ + +l+++v++l+ ++
  KHJ31007.1  64 KFGEMKAQLESYNSRNSKSASELVQVQGEATELNKAISLAQQEILHLSQSSSQKSAARSPFSGHNDNDkIAKLNDKVSTLQAEY 147
                 55689********************************************99999999999888766544***********9876 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.1
        Spc7 178 eleeeleklqe.....aaeelesidkeeLeelreelaelka 213
                 +l++   ++q+      ++++e  d+ +L  +r + ae + 
  KHJ31007.1 307 KLQAPTSTIQQnnpnePNQNFEHDDPMDLSRIRLSTAEKNY 347
                 33333333333333334466777777777777776666655 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.2   0.00044      0.78     122     182 ..      48     108 ..      42     114 .. 0.90
   2 ?    1.0   0.4      0.17   3.1e+02     130     182 ..     131     183 ..     111     207 .. 0.58
   3 ?   -1.9   0.0       1.4   2.5e+03     153     173 ..     298     318 ..     265     329 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00044
      DUF724 122 esekrkleeeidelekkilelerqlallkekkeaadkeiarlkseaekleeeledveqeFe 182
                 + ek+k+++ +   + k  e++ ql++  ++++++++e+++++ ea +l+++++ ++qe  
  KHJ31007.1  48 TPEKKKFCSLLGCYDVKFGEMKAQLESYNSRNSKSASELVQVQGEATELNKAISLAQQEIL 108
                 567899999999999**************************************99999865 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.17
      DUF724 130 eeidelekkilelerqlallkekkeaadkeiarlkseaekleeeledveqeFe 182
                 ++i++l+ k+++l+ +  +l + +++++ + ++++   ++  +++++  +eF+
  KHJ31007.1 131 DKIAKLNDKVSTLQAEYNRLPATHNTSSTKNSEVNDGSASKARRTRSDPEEFS 183
                 45666666666666666666555544444444444444333344444444443 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.4
      DUF724 153 keaadkeiarlkseaekleee 173
                 + +++++ia+l++ +++++++
  KHJ31007.1 298 NLQQQEHIAKLQAPTSTIQQN 318
                 334555555555555555554 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   4.0     0.015        27      67     114 ..      57     117 ..       3     121 .. 0.68
   2 ?    8.1  11.5    0.0016       2.8       5     133 ..      71     190 ..      67     205 .. 0.68
   3 ?    0.8   0.2      0.28   5.1e+02      10      66 ..     272     324 ..     254     348 .. 0.55

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.015
       ATG16  67 q.............snskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkl 114
                               + ++ +++ ++++++l+q++ e +el k+ +  +q +l l+++ +++
  KHJ31007.1  57 LlgcydvkfgemkaQLESYNSRNSKSASELVQVQGEATELNKAISLAQQEILHLSQSSSQK 117
                 1555555555444444455667788889999999999999999999999999999988876 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0016
       ATG16   5 qLreRdarqekafaeliqa...ynrLldrtsaleaenaklekaaasakssksskksakekeasasq.snskqsakiqsleqklaqlreelaelyksrge 99 
                 qL+  + r+ k+ +el+q     ++L + +s+ ++e   l            s++s+++++a++ + s+ ++++ki++l++k+++l++e   l  ++++
  KHJ31007.1  71 QLESYNSRNSKSASELVQVqgeATELNKAISLAQQEILHL------------SQSSSQKSAARS-PfSGHNDNDKIAKLNDKVSTLQAEYNRLPATHNT 156
                 5555555555555555555222333444444444444444............222222333333.2478889*************************** PP

       ATG16 100 laqrllelneelqkleeklkedeerlaeleaera 133
                 ++++  e+n+  + + +++++d e+    +++ +
  KHJ31007.1 157 SSTKNSEVNDGSASKARRTRSDPEEFSGTKKDTE 190
                 *********************9998877776655 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.28
       ATG16  10 darqekafaeliqaynrLldrtsaleaenaklekaaasakssksskksakekeasas 66 
                 d r +k++    ++y+   d +++ ++ n + ++++a+ ++  + ++ ++ ++ +++
  KHJ31007.1 272 DDR-TKVNLPASNNYTGWSDMINTIAR-NLQQQEHIAKLQA--PTSTIQQNNPNEPN 324
                 666.77777777777765555555533.3333333333333..11222222322222 PP

>> DUF3573  Protein of unknown function (DUF3573)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   7.3    0.0011         2      22      89 ..     111     172 ..      50     206 .. 0.73
   2 ?   -1.4   0.2      0.45   8.1e+02      44      67 ..     297     320 ..     267     332 .. 0.61

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0011
     DUF3573  22 edsasyaesneqtsksnlidkelilklqkqikelqaeinhlketknsnesaqfttysskvedsklprs 89 
                  + +s ++s+ ++  s  +d++ i kl++++  lqae n+l +t+n+      +t  s+v+d    ++
  KHJ31007.1 111 SQ-SSSQKSAARSPFSGHNDNDKIAKLNDKVSTLQAEYNRLPATHNTS-----STKNSEVNDGSASKA 172
                 23.3445566677779999***********************999942.....344455554443333 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.45
     DUF3573  44 lilklqkqikelqaeinhlketkn 67 
                   l+ q+ i++lqa    +++++ 
  KHJ31007.1 297 RNLQQQEHIAKLQAPTSTIQQNNP 320
                 234555667777777776665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1507  (0.0840538); expected 358.6 (0.02)
Passed bias filter:                      723  (0.0403257); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.40
# Mc/sec: 3167.66
//
Query:       KHJ31008.1  [L=288]
Description: putative ribosomal protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-41  141.7   0.2    2.5e-41  141.0   0.2    1.4  1  Ribosomal_S9  Ribosomal protein S9/S16


Domain annotation for each model (and alignments):
>> Ribosomal_S9  Ribosomal protein S9/S16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.0   0.2   1.4e-45   2.5e-41       1     121 []     168     288 .]     168     288 .] 0.99

  Alignments for each domain:
  == domain 1  score: 141.0 bits;  conditional E-value: 1.4e-45
                   EECTTEEEEEEEEESSSEEEETTEECCHHSTTSCHHHHHCHHHHHTTTSSSEEEEEEEESS-HHHHHHHHHHHHHHHHHHHHHHHHHHHCTCCCTS- CS
  Ribosomal_S9   1 GrrKesvArvwikegkgkilvngksleeYfkeeaarekvleplkltgllgkfdvfvkvkgGGlsgqaeAirlgiaraLvalekeekkeLkkaglltr 97 
                   GrrK+++ r+w++eg+g++lvngk+l+e f + ++re+v+ plk tg ++k++  ++v+gGG++gqaeA++l++a+aL+ +e++ k++L++ag++tr
    KHJ31008.1 168 GRRKTATGRAWLVEGTGEVLVNGKTLAEAFGRIHDRETVIWPLKSTGRIDKYNLWCRVEGGGTTGQAEALTLAVAKALLGHEPALKPALRRAGCVTR 264
                   9*****************************99***************************************************88************ PP

                   B--------TTSSCTTB----S-- CS
  Ribosomal_S9  98 DpRvvErkKtgkkkARkkyqwskR 121
                   DpR+vErkK+g+ kARkk+ w+kR
    KHJ31008.1 265 DPRKVERKKPGRLKARKKPAWVKR 288
                   ***********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.35
# Mc/sec: 2446.38
//
Query:       KHJ31009.1  [L=109]
Description: hypothetical protein EV44_g2271 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       212  (0.0118244); expected 358.6 (0.02)
Passed bias filter:                      185  (0.0103185); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 830.79
//
Query:       KHJ31010.1  [L=255]
Description: putative phosphoprotein phosphatase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-22   78.6   0.1    5.8e-22   78.1   0.1    1.2  1  NIF       NLI interacting factor-like phosphatase


Domain annotation for each model (and alignments):
>> NIF  NLI interacting factor-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.1   0.1   3.2e-26   5.8e-22       2     155 ..      72     243 ..      71     244 .. 0.84

  Alignments for each domain:
  == domain 1  score: 78.1 bits;  conditional E-value: 3.2e-26
         NIF   2 tLVLDLDetLvhsklekskklkvegekvevsvlkRpgldefLkelsklyevvifTasseeyaeavidil.dpekkl.lshrlyrescv.kk.kg....e 92 
                 +++LDL++tLv +           + + +  v+ Rp+   fL+e+   y v i++++ + ++++++d++ +p  ++ + + + r++   +k ++     
  KHJ31010.1  72 LVILDLNGTLVFRPN---------NGRQKTLVIPRPYSFTFLQECTTRYTVAIWSSARPVNVKSICDKViCPSVQKkIVAIWARDKFDlSKkDYdlrvI 161
                 89*********8885.........555689**************************************996654444**********644424477777 PP

         NIF  93 yvKdLsll................gr.dlsrvvivDdspdsfelqpengipiksffs..dkkDneLlkllpllkelakvddv 155
                 ++K Ls+l                gr d+ ++v++Dds +++  +p+n+i+i++f +   +  n L +++++l+++++ ++v
  KHJ31010.1 162 CYKRLSKLwddkiisrshpeylsgGRwDQTNTVLIDDSIEKAITEPYNLIRIPEFLGdlLEAGNILSRVSEFLHHVSMYSNV 243
                 88*****98777777666666665559****************************9746677788888*****999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       461  (0.0257125); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1762.96
//
Query:       KHJ31011.1  [L=573]
Description: putative guanyl-nucleotide exchange factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-28   96.9  18.1      5e-28   96.9  18.1    2.1  2  Sec2p       GDP/GTP exchange factor Sec2p
  ------ inclusion threshold ------
      0.012   13.2  22.0      0.017   12.7  22.0    1.1  1  DUF3584     Protein of unknown function (DUF3584)
       0.21   11.8  28.1       0.04   14.1   1.9    2.4  2  ATG16       Autophagy protein 16 (ATG16)
       0.67   10.4   3.1        3.4    8.1   0.2    2.6  2  DUF4379     Probable Zinc-ribbon domain
        1.8    8.7   6.0        4.2    7.4   6.0    1.6  1  DUF1515     Protein of unknown function (DUF1515)
        3.9    7.7  14.1        3.1    8.0  10.4    2.3  2  GCN5L1      GCN5-like protein 1 (GCN5L1)
        7.6    6.9   7.2         14    6.0   0.9    3.2  3  VPS11_C     Vacuolar protein sorting protein 11 C terminal
          9    5.5  21.2        6.8    5.9  12.2    2.2  2  DUF3450     Protein of unknown function (DUF3450)


Domain annotation for each model (and alignments):
>> Sec2p  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.3      0.77   1.7e+03      63      78 ..     133     148 ..     104     165 .. 0.53
   2 !   96.9  18.1   2.2e-31     5e-28       4      91 ..     188     279 ..     185     280 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.77
                 CHCCCHCTSSSSHHHH CS
       Sec2p  63 etlleslqeqLkeLke 78 
                 + +l++ q++L  L+e
  KHJ31011.1 133 DDILSATQHELTALQE 148
                 3344444444444443 PP

  == domain 2  score: 96.9 bits;  conditional E-value: 2.2e-31
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHTTHCHCCCHCTSSSSHHHHCTTTXXXXXXXXX CS
       Sec2p   4 eekkkreeaekekkklekEledLtasLFeeANkmVaaar....kekealekkneklkeqLkeketlleslqeqLkeLkevlekmeeeseeqe 91 
                 ee+++ree+e+ek+ +e+Ele+Lta+LFeeANkmV++ar    +e++++++kn++lk+q++++e+l+ slq+qL+eLk+v+e+m+ e+++q+
  KHJ31011.1 188 EERRRREEVEREKEVMEQELETLTAALFEEANKMVTNAReearRENYEVQRKNDQLKAQVADNESLMVSLQDQLSELKQVMEQMTMEHDDQT 279
                 89***********************************9999999********************************************9987 PP

>> DUF3584  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7  22.0   7.4e-06     0.017     599     760 ..     106     270 ..      98     278 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 7.4e-06
     DUF3584 599 aseeeLrerlqaleealqsaeakqkqaeeelkqlnaeleeakravaeaatalknardtlerlqnekesekdklekaiaerkqqaeeqlqkldaqlkqle 697
                  +   L +++ al+++l +a ++q++++  l++ + el+++++  ++ +++ k+  d le+ + +k+s  d l++ +++   + ++++++++ +++++e
  KHJ31011.1 106 SHHPDLSSEVTALSNKLINAINHQTSLDDILSATQHELTALQERSKFLERENKKYVDLLEQGFLVKKSSVDSLKAKLNATILEERRRREEVEREKEVME 204
                 45558999******************************************************************************************* PP

     DUF3584 698 eqqkaaleelkedlseerlekkakwqevvgeldeqlaelkkai...eaartqakarlkeleeaykr 760
                 ++ + + ++l e++++  ++ +++ + +  e + + ++lk+++   e+  ++ + +l+el++ +++
  KHJ31011.1 205 QELETLTAALFEEANKMVTNAREEARRENYEVQRKNDQLKAQVadnESLMVSLQDQLSELKQVMEQ 270
                 **********99999998888888888777777777777777611145567999999999998876 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   1.9   1.8e-05      0.04      34     176 ..      25     159 ..       5     162 .. 0.79
   2 ?    2.6  18.6      0.06   1.3e+02      75     167 ..     178     268 ..     166     279 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.8e-05
       ATG16  34 leaenaklekaaasakssksskksakekeasasqsnskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaer 132
                 l+a + +   a +s+ s    ++ ++  e+    ++s + + +++ +++  +l   l ++y   + + + l +  ++ + l +++ ++++ + +l++e+
  KHJ31011.1  25 LRAISTNTADAFKSSLS----SRGEQIPES----NSSPTLDAMTKVTKLAGSLSLSLRNSYSDDEGNLSTLPDPRNKPRSLSTEIPTQNSHHPDLSSEV 115
                 44444444333333332....112222222....335689999999999999*********************************************** PP

       ATG16 133 aaletklkdreeelrekeklvqdlqDElsaLqlqlnqaEeklrk 176
                 +al+ kl +  ++   ++  + + q El+aLq + + +E +++k
  KHJ31011.1 116 TALSNKLINAINHQTSLDDILSATQHELTALQERSKFLERENKK 159
                 ********************************999999998887 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.06
       ATG16  75 kiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlql 167
                   ++l++++++ r   +e+ ++++ ++q l +l+++l +  +k+ ++++  +e+++e+ ++++k +++++++++ e l+  lqD ls L+  +
  KHJ31011.1 178 LKAKLNATILEERRRREEVEREKEVMEQELETLTAALFEEANKMVTNAR--EEARRENYEVQRKNDQLKAQVADNESLMVSLQDQLSELKQVM 268
                 5577888999999999**********************99999998887..58999****************************999997555 PP

>> DUF4379  Probable Zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.2    0.0015       3.4      21      56 .]     463     509 ..     457     509 .. 0.88
   2 ?    1.9   0.3      0.13   2.9e+02      29      46 ..     530     550 ..     527     554 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0015
     DUF4379  21 tpgskkkvwWkCakCgh.....eWeasvsnrtkgssk......CpkC 56 
                 +p+s+k+v   Ca Cg+     e+  s + +t+++++      C++C
  KHJ31011.1 463 MPSSSKNVAYSCALCGEsrnepEYIRSYRFKTNENENaqryplCKYC 509
                 689*************8888899999999999777778899999999 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.13
     DUF4379  29 wWkCakCgh....eWeasvsnr 46 
                  W+C+  ++     We+sv+ r
  KHJ31011.1 530 HWRCDD-EEseksAWEESVRLR 550
                 6***55.4333459****9987 PP

>> DUF1515  Protein of unknown function (DUF1515)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   6.0    0.0019       4.2       7      74 ..     204     272 ..     193     274 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0019
     DUF1515   7 lqqlgtllaevk.elredlkrsedrsdasrakmyrkmdelvervtalegsvvklkaditsvkevtedvk 74 
                  q+l+tl a +  e  + + ++ + +     +++rk d+l  +v+  e+ +v l++ ++++k+v e+++
  KHJ31011.1 204 EQELETLTAALFeEANKMVTNAREEARRENYEVQRKNDQLKAQVADNESLMVSLQDQLSELKQVMEQMT 272
                 5677777766540344445566666666677899******************************99865 PP

>> GCN5L1  GCN5-like protein 1 (GCN5L1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1      0.29   6.5e+02      22      75 ..     110     162 ..      98     168 .. 0.59
   2 ?    8.0  10.4    0.0014       3.1       9     100 ..     189     276 ..     182     283 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.29
      GCN5L1  22 eaiesaaaltealvdklnsgvaeayanqkklekeakalqanvakfakqtdqWla 75 
                 +++++++al+++l++++n++ +       +  +e+ alq++++ +++++++++ 
  KHJ31011.1 110 DLSSEVTALSNKLINAINHQTSLD-DILSATQHELTALQERSKFLERENKKYVD 162
                 556677777777777777665422.11223345666666666666666666655 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0014
      GCN5L1   9 qaerreeqekakkeaiesaaaltealvdklnsgvaeayanqkklekeakalqanvakfakqtdqWlalvesfnsalkeiGDvenWaktienD 100
                 +++rree e++k+ + ++++ lt al ++ n+ v++a +++++   e  ++q++ ++++ q++   +l+ s++++l e+  v +  +t+e+D
  KHJ31011.1 189 ERRRREEVEREKEVMEQELETLTAALFEEANKMVTNAREEARR---ENYEVQRKNDQLKAQVADNESLMVSLQDQLSELKQVME-QMTMEHD 276
                 578999*******************************999997...66677889999999999999999999999999999987.4466666 PP

>> VPS11_C  Vacuolar protein sorting protein 11 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       4.7   1.1e+04      17      27 ..      32      42 ..      29      44 .. 0.77
   2 ?    2.5   0.7      0.08   1.8e+02       1      26 [.     183     208 ..     183     212 .. 0.94
   3 ?    6.0   0.9    0.0064        14       5      28 ..     227     250 ..     224     252 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 4.7
     VPS11_C 17 rhdlFkaaLee 27
                 +d Fk++L +
  KHJ31011.1 32 TADAFKSSLSS 42
                57999999975 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.08
     VPS11_C   1 netirelrraQeesadrhdlFkaaLe 26 
                 n+ti e rr  ee+   ++  +++Le
  KHJ31011.1 183 NATILEERRRREEVEREKEVMEQELE 208
                 789**********************8 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0064
     VPS11_C   5 relrraQeesadrhdlFkaaLees 28 
                 +e rr++ e+  ++d++ka++ ++
  KHJ31011.1 227 EEARRENYEVQRKNDQLKAQVADN 250
                 688*****************9985 PP

>> DUF3450  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   6.6     0.034        76      13     109 ..     117     214 ..     111     222 .. 0.86
   2 ?    5.9  12.2     0.003       6.8      28      99 ..     200     272 ..     194     274 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.034
     DUF3450  13 alaatldqalkeaekavaaaaqsqkkidklddekqellaeyralkeeles.levyneqlerlvasqeqeiasleeqieeieeierelvpllekmidrL 109
                 al+++l +a++ +++  ++ +++q + ++l++ ++ l++e ++  + le+   v+++ +++l a+++++i + +++ ee+e+ ++ +++ le++ ++L
  KHJ31011.1 117 ALSNKLINAINHQTSLDDILSATQHELTALQERSKFLERENKKYVDLLEQgFLVKKSSVDSLKAKLNATILEERRRREEVEREKEVMEQELETLTAAL 214
                 4588999999****************************999998887765378899999999999999999999999999999998888888877766 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.003
     DUF3450  28 avaaaaqsqkkidklddekqellaeyr.alkeeleslevyneqlerlvasqeqeiasleeqieeieeierelv 99 
                     +++ ++   +l +e+++++ + r ++++e+ + + +n+ql+++va+ e+ + sl+ q++e++++ ++++
  KHJ31011.1 200 KEVMEQELETLTAALFEEANKMVTNAReEARRENYEVQRKNDQLKAQVADNESLMVSLQDQLSELKQVMEQMT 272
                 5567888899999999***99999887268899999*******************************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (573 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1960  (0.10932); expected 358.6 (0.02)
Passed bias filter:                      615  (0.034302); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.81u 0.29s 00:00:01.10 Elapsed: 00:00:00.48
# Mc/sec: 3602.18
//
Query:       KHJ31012.1  [L=518]
Description: putative pre-mrna-splicing factor 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.2e-51  173.1  19.4    5.6e-50  170.2  19.4    2.0  1  PRP21_like_P    Pre-mRNA splicing factor PRP21 like protein
    8.2e-38  128.2   8.8    1.6e-19   69.6   0.1    3.0  3  Surp            Surp module
     0.0025   17.4   0.2     0.0025   17.4   0.2    1.8  2  zf_UBZ          Ubiquitin-Binding Zinc Finger
  ------ inclusion threshold ------
      0.061   14.0   0.6      0.061   14.0   0.6    2.2  2  zf-WRNIP1_ubi   Werner helicase-interacting protein 1 ubiquit
      0.073   12.6   0.2       0.18   11.4   0.2    1.6  1  Sgf11           Sgf11 (transcriptional regulation protein)
        0.2   11.8   3.2        1.7    8.9   1.0    2.4  2  Jiv90           Cleavage inducing molecular chaperone
       0.41    9.9   7.6       0.11   11.8   0.8    2.2  2  Piezo_RRas_bdg  Piezo non-specific cation channel, R-Ras-bind


Domain annotation for each model (and alignments):
>> PRP21_like_P  Pre-mRNA splicing factor PRP21 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.2  19.4   2.2e-53   5.6e-50       1     217 []     206     454 ..     206     454 .. 0.84

  Alignments for each domain:
  == domain 1  score: 170.2 bits;  conditional E-value: 2.2e-53
  PRP21_like_P   1 elkdkqkileralkraewekqkekeeqkkeeeeeeeklafasiDWqdFvvvetieFdd.deleelpkPltleelkarsleqkskal........... 85 
                   ++kdk + l+ra++raew k + +++qkkeee+e+ek+++a+iDW+ Fvvvet+ F++ d++++lp+P++l+el+ +sl+qk +++           
    KHJ31012.1 206 NVKDKFHCLSRAKERAEWFKFQDEQKQKKEEEAEKEKIQYAQIDWHYFVVVETVVFTEaDDQANLPPPTSLSELQCASLDQKAMMSinshnlrieea 302
                   589********************************************************************************************** PP

  PRP21_like_P  86 ............................eeaeaetdvemevdeeeeeeseekiekkskesavseepalakae...kkmkikadyesrlkkrknskat 151
                                                  +      +e+++eee++  e++e+++    +++ +a a  +     mkik++y++r++ r ++k++
    KHJ31012.1 303 mpgemdyynsypqqvqttqnstmqpgyqPGYKDSSLRVIEEENEEEQRIRERMEAQQ---RAQQAQAEA--KggsAPMKIKENYVPRAAARVANKQN 394
                   ***999999999998888887777644322222222333333344444444444333...233322222..255689***********999888874 PP

  PRP21_like_P 152 kekkkakcpitgeliPedeleeHmrieLlDPrykeqkdklvekkskesslltddevaenlkrlakk 217
                        ++cp++++  P++el+eH+rieLlD r+keqk k+  +++ ++++l +++va+nlkrla++
    KHJ31012.1 395 L----VVCPNCKQQMPASELDEHIRIELLDSRWKEQKAKA--ESRYATTNLSTQDVANNLKRLASQ 454
                   4....7********************************86..9********************985 PP

>> Surp  Surp module
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.6   0.1   6.2e-23   1.6e-19       2      52 ..      32      81 ..      31      82 .. 0.94
   2 !   63.6   0.4   4.6e-21   1.2e-17       1      53 []     128     179 ..     128     179 .. 0.97
   3 ?   -3.9   0.3       5.7   1.4e+04      15      25 ..     344     354 ..     340     359 .. 0.68

  Alignments for each domain:
  == domain 1  score: 69.6 bits;  conditional E-value: 6.2e-23
                HHHHHHHHHHTT-S.SHHHHHHHH.T--TTSGGGSTT.STTHHHHHHHHHH CS
        Surp  2 eiIkktAqfVarnGkeFeqklrerernnpqFaFLkdpdhpyhayYrwrvde 52
                 i +ktA +V+rnG  Fe+++re+e++np+F+FL+++ ++y+ayY wr++e
  KHJ31012.1 32 AILEKTAGYVSRNGILFEERIREKEKHNPKFSFLSPN-DAYNAYYLWRLNE 81
                689*******************************777.***********98 PP

  == domain 2  score: 63.6 bits;  conditional E-value: 4.6e-21
                 HHHHHHHHHHHTT-S.SHHHHHHHH.T--TTSGGGSTT.STTHHHHHHHHHHH CS
        Surp   1 leiIkktAqfVarnGkeFeqklrerernnpqFaFLkdpdhpyhayYrwrvdey 53 
                 le++k+tA fVa+nG++F + l +re +n qF+FL+++ h +h ++++++d+y
  KHJ31012.1 128 LEVVKLTALFVAKNGRQFMTTLSQRETGNYQFDFLRPN-HTLHNFFQRLIDQY 179
                 689********************************888.************99 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 5.7
                 S.SHHHHHHHH CS
        Surp  15 GkeFeqklrer 25 
                   e eq++rer
  KHJ31012.1 344 ENEEEQRIRER 354
                 55668999998 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.2   2.6         7   1.8e+04      22      25 ..     249     252 ..     249     252 .. 0.88
   2 !   17.4   0.2   9.8e-07    0.0025       3      20 ..     396     413 ..     394     413 .. 0.94

  Alignments for each domain:
  == domain 1  score: -5.2 bits;  conditional E-value: 7
      zf_UBZ  22 DwHf 25 
                 DwH+
  KHJ31012.1 249 DWHY 252
                 9**6 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 9.8e-07
      zf_UBZ   3 ylCerCgkeipeselqEH 20 
                 ++C+ C++++p sel+EH
  KHJ31012.1 396 VVCPNCKQQMPASELDEH 413
                 79**************** PP

>> zf-WRNIP1_ubi  Werner helicase-interacting protein 1 ubiquitin-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.2         2   5.1e+03      16      20 ..     291     295 ..     279     296 .. 0.66
   2 ?   14.0   0.6   2.4e-05     0.061       3      20 ..     396     413 ..     394     414 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 2
  zf-WRNIP1_ubi  16 HinsH 20 
                     insH
     KHJ31012.1 291 SINSH 295
                    49999 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 2.4e-05
  zf-WRNIP1_ubi   3 vqCPvCqqmmPAAHinsH 20 
                    v CP C+q mPA  +  H
     KHJ31012.1 396 VVCPNCKQQMPASELDEH 413
                    78**********999888 PP

>> Sgf11  Sgf11 (transcriptional regulation protein)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   7.1e-05      0.18       3      17 ..     394     408 ..     392     409 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.1e-05
                 -EEE-TTTSSEEEGG CS
       Sgf11   3 eyvtCpnCgRqiaas 17 
                  +v+CpnC++q+ as
  KHJ31012.1 394 NLVVCPNCKQQMPAS 408
                 689********9876 PP

>> Jiv90  Cleavage inducing molecular chaperone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   1.0   0.00065       1.7      13      66 ..     208     262 ..     197     268 .. 0.85
   2 ?    2.2   0.0     0.076   1.9e+02      25      55 ..     394     424 ..     382     454 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00065
       Jiv90  13 kHkriaversksaaRfckeCkelhsakegDiWaes.sllgllvryyacadgkvyd 66 
                 k k  +++r k++a + k  +e+++ ke +   e+ +++++ ++y+++++++v+ 
  KHJ31012.1 208 KDKFHCLSRAKERAEWFKFQDEQKQKKEEEAEKEKiQYAQIDWHYFVVVETVVFT 262
                 56677899**********************999874577899***********95 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.076
       Jiv90  25 aaRfckeCkelhsakegDiWaessllgllvr 55 
                 +  +c +Ck++ +a e D  +  +ll  +++
  KHJ31012.1 394 NLVVCPNCKQQMPASELDEHIRIELLDSRWK 424
                 4557999999999999998888777777774 PP

>> Piezo_RRas_bdg  Piezo non-specific cation channel, R-Ras-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.8   4.2e-05      0.11     242     333 ..     174     261 ..     116     265 .. 0.69
   2 ?    1.6   1.0     0.054   1.4e+02     236     303 ..     298     362 ..     269     397 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.2e-05
                     EEEEEE-SEEEE-S.SSS-B--HHHHH---TTSEEEEEEEESS....--TT--EEEEEEE-SS-TT-T-B-TT.T--B..-EEEEEEE-XXX CS
  Piezo_RRas_bdg 242 llpnlypkflrltasgeeaklssqlekeeeaayrnvtltlkrsssssskeaqewWeveekspdeaeskessksevsskskglelvvfsdkvs 333
                     +l + y+ +lr+++ ++++ +++q +   ++  +nv+ ++++ s+ +  e++ew+++++++++++e+++++++   ++ ++ ++vv+   v+
      KHJ31012.1 174 RLIDQYSTLLRTEGIDGTRGKQHQQR--IKELEANVKDKFHCLSRAK--ERAEWFKFQDEQKQKKEEEAEKEKIQYAQIDWHYFVVVETVVF 261
                     45556777788888788888888777..778899*********6655..68**********8877776555555555556666666655555 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.054
                     -.....-E..EEEEEE-SEEEE-S.SSS-B--HHHHH---TTSEEEEEEEESS....--TT--EEEEEEE-S CS
  Piezo_RRas_bdg 236 e....epvsvllpnlypkflrltasgeeaklssqlekeeeaayrnvtltlkrsssssskeaqewWeveeksp 303
                           p ++   n yp+ +++t+ ++++++  q        y++ +l++ ++++++++   e  e ++  +
      KHJ31012.1 298 RieeaMPGEMDYYNSYPQQVQTTQ-NSTMQPGYQPG------YKDSSLRVIEEENEEEQRIRERMEAQQRAQ 362
                     034445777889999********9.88889998888......999999999998887665555555555442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2061  (0.114953); expected 358.6 (0.02)
Passed bias filter:                      700  (0.0390429); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.46
# Mc/sec: 3353.66
//
Query:       KHJ31013.1  [L=199]
Description: putative ras-like protein ced-10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-53  179.7   0.0    3.5e-53  179.5   0.0    1.0  1  Ras       Ras family
    1.4e-20   73.7   0.0    2.1e-20   73.1   0.0    1.3  1  Roc       Ras of Complex, Roc, domain of DAPkinase
    5.7e-07   29.2   0.0      8e-07   28.7   0.0    1.2  1  Arf       ADP-ribosylation factor family


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.5   0.0   5.8e-57   3.5e-53       1     161 [.      10     182 ..      10     183 .. 0.98

  Alignments for each domain:
  == domain 1  score: 179.5 bits;  conditional E-value: 5.8e-57
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHH.HHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvk.kwveeik 98 
                 K+v+ Gd+avGKt+ll++++++ F+ ey++T+ +d+y+++++vdgk ++l +wDTAGqe++++lr+l+y +++++l++++i s  sf+nv+ kw+ ei 
  KHJ31013.1  10 KCVVTGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSASVMVDGKPISLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIVSPPSFDNVRaKWFPEID 107
                 89******************************.****************************************************************** PP

                 HHSTTTSEEEEEEETTTGGG............G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHHHH CS
         Ras  99 rvaeenvpivLvGnKvDlee............kravsteegeelakelg.lkfletSAktnenveeafeellreil 161
                 ++a+ +vpi+LvG+K Dl+e               v+++++  +ake+   k+le+SA t+ n++ +f+e++r++l
  KHJ31013.1 108 HHAP-SVPIILVGTKLDLREdqatleslkqkrMDPVTYDQALIVAKEIRaHKYLECSALTQRNLKSVFDEAIRAVL 182
                 ****.6***********************988889**************99*********************9986 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.1   0.0   3.6e-24   2.1e-20       1     120 []      10     124 ..      10     124 .. 0.89

  Alignments for each domain:
  == domain 1  score: 73.1 bits;  conditional E-value: 3.6e-24
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCH. CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenl. 95 
                 K v+ Gd++vGKt+ll +++++ f  ++ +t+  +++ + +  ++g       k ++l +WDtaGqe+++ l+pl + + +++++++      s++n+ 
  KHJ31013.1  10 KCVVTGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSASVM--VDG-------KPISLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSivsPPSFDNVr 99 
                 78999***************************999876543..333.......689******************************9865444788874 PP

                 HHHHHHHHHHCSSS-EEEEEE-TTT CS
         Roc  96 keWlkelkkvagkspvilvgnkiDl 120
                  +W+ e++++a++ p+ilvg+k+Dl
  KHJ31013.1 100 AKWFPEIDHHAPSVPIILVGTKLDL 124
                 68*********************95 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   1.3e-10     8e-07      12     169 ..       6     175 ..       2     181 .. 0.82

  Alignments for each domain:
  == domain 1  score: 28.7 bits;  conditional E-value: 1.3e-10
                 TTEEEEEEEESTTSSHHHHHHHHHHSSCE.ECSSSSSEEEE.EEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHH CS
         Arf  12 kkelrilllGLDnaGKtTilkklkleelv.ttvPTigfnve.elei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLka 106
                 +++l++++ G  + GKt +l  ++++ +  + +PT+  n   ++++  k +++ +wD  Gqe   +l    +++td+ + +   +    +++ +++   
  KHJ31013.1   6 TQSLKCVVTGDGAVGKTCLLISYTTNAFPgEYIPTVFDNYSaSVMVdgKPISLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIVSPPSFDNVRAKWFP 104
                 5789******9999************996269***988854255555599*************9999999***********************998766 PP

                 HCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSS.........SSSSEEEEEEBTTTTBTHHHHHH CS
         Arf 107 lleeeelkevallvlaNKqDlpealseeelrellgleelk.........gkrkleiqkcsavkgeglkegle 169
                  +++ +  +v++++++ K Dl+e+  + e  ++  ++ ++           r  +  +csa+++++lk+ ++
  KHJ31013.1 105 EIDH-HAPSVPIILVGTKLDLREDQATLESLKQKRMDPVTydqalivakEIRAHKYLECSALTQRNLKSVFD 175
                 6654.45689**************999999999999996644444444455666677888888888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1470.74
//
Query:       KHJ31014.1  [L=467]
Description: putative rna binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-11   42.6   0.0    9.1e-11   41.4   0.0    1.6  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.0   5.1e-15   9.1e-11       1      65 [.     315     380 ..     315     384 .. 0.93

  Alignments for each domain:
  == domain 1  score: 41.4 bits;  conditional E-value: 5.1e-15
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE..TTTSEEEEEEEEESSHHHHHHHHHHHTTEEET CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd..etgkskgfafVeFeskedAekAlealngkklg 65 
                 +fVgnLp+++t++ +  +Fsk  p  s++  ++     ks+g+afVeFe+ +  + Al+ +++  ++
  KHJ31014.1 315 VFVGNLPYTATKDSIMSHFSKLKPL-SVRHLTKkeDSSKSRGIAFVEFENFDTHKTALKIMHHSIFD 380
                 8************************.8888888899***********************99998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2471  (0.137821); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.91u 0.28s 00:00:01.19 Elapsed: 00:00:00.49
# Mc/sec: 2865.47
//
Query:       KHJ31015.1  [L=458]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.06   13.8   0.3        2.2    8.7   0.0    2.3  2  DUF1687      Protein of unknown function (DUF1687)


Domain annotation for each model (and alignments):
>> DUF1687  Protein of unknown function (DUF1687)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1    0.0091   1.6e+02       6      39 ..     119     152 ..     116     170 .. 0.82
   2 ?    8.7   0.0   0.00012       2.2      49     107 ..     380     436 ..     350     446 .. 0.71

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.0091
     DUF1687   6 kspdvitlFhnakspaSnkllklLkkasakasek 39 
                 k+++ itl +na++ +S k+ k L ++ ++ +++
  KHJ31015.1 119 KKKARITLSTNASVVSSRKATKSLTSKDKSPTRD 152
                 56788*******************9987776444 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00012
     DUF1687  49 felevtekfPTlDQlktilsyvgkskaksvlksafpelseilkkfkkdeeskkklkelv 107
                 f     +++PT +Qlkt  +  g+ ++++vl+++ +e+  +  + ++  e +++ ++ v
  KHJ31015.1 380 FAHPTRSGAPTKEQLKTYRQ-AGEREYHAVLRAKAAEELAASTNNNNI-ELASNQASEV 436
                 555567899********999.788889999999985555555554444.5544444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       877  (0.0489152); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3269.52
//
Query:       KHJ31016.1  [L=128]
Description: hypothetical protein EV44_g0435 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       342  (0.0190752); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 1022.24
//
Query:       KHJ31017.1  [L=439]
Description: putative acyl- mitochondrial precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.2e-41  140.1   4.1      1e-40  139.4   4.1    1.4  1  Acyl-CoA_dh_1  Acyl-CoA dehydrogenase, C-terminal domain
    1.8e-28   99.4   0.7    5.3e-27   94.7   0.0    2.4  2  Acyl-CoA_dh_N  Acyl-CoA dehydrogenase, N-terminal domain
    1.4e-23   82.9   0.1    3.2e-23   81.7   0.1    1.7  1  Acyl-CoA_dh_M  Acyl-CoA dehydrogenase, middle domain
    1.4e-18   67.5   1.5    2.4e-18   66.7   1.5    1.4  1  Acyl-CoA_dh_2  Acyl-CoA dehydrogenase, C-terminal domain
    0.00011   22.0   0.0    0.00028   20.7   0.0    1.6  1  HpaB_N         4-hydroxyphenylacetate 3-hydroxylase N termina
  ------ inclusion threshold ------
      0.055   13.5   0.0       0.22   11.5   0.0    2.0  2  AgrD           Staphylococcal AgrD protein


Domain annotation for each model (and alignments):
>> Acyl-CoA_dh_1  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.4   4.1   3.4e-44     1e-40       1     147 [.     284     431 ..     284     434 .. 0.97

  Alignments for each domain:
  == domain 1  score: 139.4 bits;  conditional E-value: 3.4e-44
                    TBHHHHHTTTT--S-----..-SHHHHHHHHHHHHHHH.TSB-CC-BGGGSHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHH CS
  Acyl-CoA_dh_1   1 gkGfrvametlnheRlavaaaalglarraleealeyar.rrkafgkplidhqlvreklaemaaeleaarllvyraaealdagkpdraeasmaKlfa 95 
                    g+G ++a++ ln +R+++aa++ gla  a+e+a++y+  +rk+fg++++d+q +++++a+ ++++ aar+lvy+aa++ + g++  ++a+maKl+a
     KHJ31017.1 284 GDGYKYAISLLNEGRIGIAAQMTGLALGAFENAVKYVWnDRKQFGQHVGDFQGMQHQIAQSYTNISAARALVYNAARKKEVGEDFVQDAAMAKLYA 379
                    69**********************************96157******************************************************* PP

                    HHHHHHHHHHHHHHHGGGTTSGGGHHHHHHHHTHHHHHSSS-HHHHHHHHHH CS
  Acyl-CoA_dh_1  96 selaqevadlamqllGgaGyleeypverlyrdarvlrigeGtseiqrniiar 147
                    +++aq+v  la++++Gg+G+ +e+  e+++rd+++  i+eGts+iq+++ia+
     KHJ31017.1 380 AQVAQQVSGLAIEWMGGMGFVREGIAEKMWRDSKIGAIYEGTSNIQLQTIAK 431
                    **************************************************98 PP

>> Acyl-CoA_dh_N  Acyl-CoA dehydrogenase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.7   0.0   1.8e-30   5.3e-27       2     111 ..      63     172 ..      62     174 .. 0.97
   2 ?    2.8   0.1     0.062   1.8e+02      26      65 ..     358     397 ..     336     435 .. 0.65

  Alignments for each domain:
  == domain 1  score: 94.7 bits;  conditional E-value: 1.8e-30
                    HHHHHHHHHHHHHHHHHTHHHHHHHHHHTSGHHHHHHHHHHTTCTSTTS-GGGTS--S-HHHHHHHHHHHHHH-HHHHHHHHHHHHTTHHHHHHHS CS
  Acyl-CoA_dh_N   2 eeqealrdtvrefaeeelaphaaewdeegefprelwkklaelGllgitvpeeygGagldyleaaivaeelaradaglalllgvhsslvapailrfG 97 
                    e++ a+ +tv +fa++ + p+++e+de++++  e++++l e+G++gi +pee+gGag+++++a++ +eelar+d ++++l+ vh++lv  a+++++
     KHJ31017.1  63 ETEMAMAETVSKFASNVISPKVREMDEAEAMSSEIVEQLFEQGFMGIEIPEEFGGAGMNFTAAIVGIEELARVDPSVSVLVDVHNTLVNTAFIKYA 158
                    788899****************************************************************************************** PP

                    -HHHHHHHHHHHHT CS
  Acyl-CoA_dh_N  98 teeqkrryLpklas 111
                    +++ k+ +Lpkla+
     KHJ31017.1 159 SPQLKKIWLPKLAT 172
                    ************97 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.062
                    HHHHTSGHHHHHHHHHHTTCTSTTS-GGGTS--S-HHHHH CS
  Acyl-CoA_dh_N  26 wdeegefprelwkklaelGllgitvpeeygGagldyleaa 65 
                    + +++e+ +++++ +a + l++ +v +++ G+  +++  +
     KHJ31017.1 358 AARKKEVGEDFVQDAAMAKLYAAQVAQQVSGLAIEWMGGM 397
                    22455888999***************99999775544333 PP

>> Acyl-CoA_dh_M  Acyl-CoA dehydrogenase, middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.7   0.1   1.1e-26   3.2e-23       1      97 []     177     272 ..     177     272 .. 0.92

  Alignments for each domain:
  == domain 1  score: 81.7 bits;  conditional E-value: 1.1e-26
                    EEE---SS-SS-GGG---EEEEETT.EEEEEEEEEEEETTTT-SEEEEEEE.TS-------EEEEEEE..GGGEEE-----BSS-TTS-EEEEEEE CS
  Acyl-CoA_dh_M   1 afalTEpqaGsdvasvkttaaerdggeyvlnGeKiwitnaaiatlalvlar.tekpdrarglslflvprdapgvsvrrieeklGlrglptgelvfe 95 
                    +f+l+Ep +Gsd+ +++t+a e+++++y+++G+K+witna++a++++v+a   +++  ++g++ f+++++++g+s+ ++e+klG++  +t+ l f+
     KHJ31017.1 177 SFCLSEPVSGSDAFALATKA-EKNDNGYTISGSKMWITNAMEAEVFIVFANlDHSKG-YKGITAFIIEKNMKGFSIAKKEKKLGIKASSTCVLNFD 270
                    69****************65.555558************************766666.*************************************9 PP

                    .. CS
  Acyl-CoA_dh_M  96 dv 97 
                    +v
     KHJ31017.1 271 EV 272
                    86 PP

>> Acyl-CoA_dh_2  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7   1.5   7.9e-22   2.4e-18       1     133 [.     299     422 ..     299     423 .. 0.95

  Alignments for each domain:
  == domain 1  score: 66.7 bits;  conditional E-value: 7.9e-22
                    .HHHHHHHHHHHHHHHHHHHHHH.HHHCTTT-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHH CS
  Acyl-CoA_dh_2   1 lgiaavalGaAraalaefvelar.ervrassgekladdpatqlalaeaaarldAAralleraaaraealaaagkevtvedraearraaalavelai 95 
                    +giaa+++G+A +a++ +v+++  +r++  +g+++ d++ +q+++a++ +++ AAral+++aa++     + g+ +    +++a++a+++a++ a+
     KHJ31017.1 299 IGIAAQMTGLALGAFENAVKYVWnDRKQ--FGQHVGDFQGMQHQIAQSYTNISAARALVYNAARK----KEVGEDF----VQDAAMAKLYAAQVAQ 384
                    589******************9869999..*******************************9999....6666666....**************** PP

                    HHHHHHHHHCGGGGGBTT-HHHHHHHHHHHHCTSGGG- CS
  Acyl-CoA_dh_2  96 aavdalfeaaGgsalrkesplqRlwRDahaaaaHaaln 133
                    ++   ++e +Gg++   e   + +wRD +++a++++++
     KHJ31017.1 385 QVSGLAIEWMGGMGFVREGIAEKMWRDSKIGAIYEGTS 422
                    **********************************9876 PP

>> HpaB_N  4-hydroxyphenylacetate 3-hydroxylase N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   9.2e-08   0.00028     166     270 ..     190     279 ..     181     280 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 9.2e-08
                 TSB-EEEEE-SSEEEEEEEEEEEE-.--SSEEEE---SS-..TTSGGG-EEEEEETT-TTEEEEE-------S..-TTT-TTTTT----EEEEEEEEEE CS
      HpaB_N 166 dvyvrvveetddGivVrGakvlaTgaaladeilvlptramlkeedkdyavafavpvdapGlklicresfedkleesefdyplssrfdendalvvfDdVf 264
                  + +   e++d+G  ++G k+ +T+a+ a+ ++v+        +  +   af+++ + +G ++  +e+             ++     +++++ fD+V 
  KHJ31017.1 190 FALATKAEKNDNGYTISGSKMWITNAMEAEVFIVFANLD--HSKGYKGITAFIIEKNMKGFSIAKKEKKLG----------IK---ASSTCVLNFDEVA 273
                 555666799*************************99944..456777889***********9887776444..........22...34789999***** PP

                 EEGGGE CS
      HpaB_N 265 VPwerV 270
                 +P e+ 
  KHJ31017.1 274 IPKENL 279
                 **9986 PP

>> AgrD  Staphylococcal AgrD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       2.1   6.2e+03       1      18 [.     147     165 ..     147     183 .. 0.64
   2 ?   11.5   0.0   7.5e-05      0.22      21      39 ..     259     277 ..     255     279 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2.1
        AgrD   1 NtlFNL.FidFiTtILkfI 18 
                 Ntl N  Fi++    Lk I
  KHJ31017.1 147 NTLVNTaFIKYASPQLKKI 165
                 7777743888887777766 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 7.5e-05
        AgrD  21 vAadSvCdsifDEvEVPkE 39 
                 + a S+C   fDEv +PkE
  KHJ31017.1 259 IKASSTCVLNFDEVAIPKE 277
                 6799**************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3144.07
//
Query:       KHJ31018.1  [L=1149]
Description: putative protein kinase c [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      9e-59  199.0   0.0    1.9e-58  197.9   0.0    1.6  1  Pkinase      Protein kinase domain
    3.2e-35  121.7   0.0    6.2e-35  120.7   0.0    1.4  1  Pkinase_Tyr  Protein tyrosine kinase
    1.4e-22   79.6  30.5    3.8e-13   49.3   4.0    3.0  3  HR1          Hr1 repeat
    3.8e-18   65.1  33.1    1.7e-10   40.6   9.8    2.4  2  C1_1         Phorbol esters/diacylglycerol binding domain (C1
    4.8e-14   52.8   3.3    1.9e-13   50.9   3.3    2.2  1  Pkinase_C    Protein kinase C terminal domain
     0.0035   17.6   0.1      0.008   16.5   0.1    1.6  1  C2           C2 domain
  ------ inclusion threshold ------
      0.029   13.7   0.0      0.074   12.4   0.0    1.6  2  Kinase-like  Kinase-like
        3.1    7.8   6.9       0.63   10.1   2.4    2.0  2  DUF892       Domain of unknown function (DUF892)
        6.3    6.7  25.9        5.8    6.8  10.9    2.7  2  zf-RING_9    Putative zinc-RING and/or ribbon


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.9   0.0   9.6e-62   1.9e-58       3     264 .]     826    1083 ..     824    1083 .. 0.91

  Alignments for each domain:
  == domain 1  score: 197.9 bits;  conditional E-value: 9.6e-62
                  EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS...CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS- CS
     Pkinase    3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklk...hpnivrlyevfeekdelylvleyveggeladllerkgsl 95  
                   l  lG+G+fGkV+ a  k+t++ +A+K++kke + +++e +++++E +++   +   hp++ +l  +f++++++y+v+ey++gg+l+ +++ +g++
  KHJ31018.1  826 FLAVLGKGNFGKVMLAEAKSTKQLYAIKVLKKEFIIENDEvESTRSEKRVFLIANrerHPFLTNLHACFQTETRVYFVMEYISGGDLMLHIQ-RGQF 921 
                  6778*********************************999999999998765555557*********************************7.699* PP

                  -HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEE.SSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHH CS
     Pkinase   96 seeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlake.lessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyell 191 
                    ++a+++a++++ +l+y H++g+i+rDlK +NiL+  +g++K++D+Gl+ke +  +s++++f+gt+e++APE+l +++y+++vD+W+ Gv++y++l
  KHJ31018.1  922 GTKRAQFYAAEVCLALKYFHENGVIYRDLKLDNILLTLDGHIKMADYGLCKEdMWYGSTTSTFCGTPEFMAPEILLDKKYGRSVDWWAFGVLIYQML 1018
                  **************************************************974666777************************************** PP

                  HSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT.....HHHHHTSGGG CS
     Pkinase  192 tgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt.....aeellqhpyl 264 
                   ++ pf+ge+++e + ++l +             +   + +++++  ++l+kll+++p +Rl+     a e++++p++
  KHJ31018.1 1019 LQQSPFRGEDEDEIYDAILAD-------------EPLYPIHMPRDSVSILQKLLTREPDQRLGsgptdALEVMSQPFF 1083
                  *******99999966666666.............3445667899******************9888888888888887 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.7   0.0   3.1e-38   6.2e-35       3     249 ..     826    1066 ..     824    1068 .. 0.85

  Alignments for each domain:
  == domain 1  score: 120.7 bits;  conditional E-value: 3.1e-38
                   EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTS..SHHHHHHHHHHHHH..HHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHH CS
  Pkinase_Tyr    3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeea..teeekeelleeaki..mkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLr 93  
                   +   lG+G+fGkV+ +++k    ++++  a+K+lk+e   +++e e+  +e ++  + +  +hp + +l+++   e ++++v+ey++gGdL  +++
   KHJ31018.1  826 FLAVLGKGNFGKVMLAEAK----STKQLYAIKVLKKEFiiENDEVESTRSEKRVflIANReRHPFLTNLHACFQTETRVYFVMEYISGGDLMLHIQ 917 
                   6789***************....666677777776643114444566666655411556679*****************************98888 PP

                   HTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHH CS
  Pkinase_Tyr   94 kkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvW 189 
                   +    ++ +k+   +a++v+ +++y +++ ++ rdl   N+Ll+ + ++k++D+GL+++   + + +++++     ++mapE+l +kk+  + D W
   KHJ31018.1  918 RG---QFGTKRAQFYAAEVCLALKYFHENGVIYRDLKLDNILLTLDGHIKMADYGLCKED--MWYGSTTSTFCGTPEFMAPEILLDKKYGRSVDWW 1008
                   76...9***************************************************976..444455555556789******************* PP

                   HHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS CS
  Pkinase_Tyr  190 sfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeR 249 
                   +fGvl++ ++   +sp++g ++ e+++++ +++ l  p ++p++  ++++k ++++p++R
   KHJ31018.1 1009 AFGVLIYQMLL-QQSPFRGEDEDEIYDAILADEPLY-PIHMPRDSVSILQKLLTREPDQR 1066
                   ********998.8****************9988875.778999999**********9999 PP

>> HR1  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5  10.8   2.6e-14   5.1e-11       3      68 ..       9      69 ..       7      70 .. 0.93
   2 !   49.3   4.0   1.9e-16   3.8e-13       1      66 [.     171     234 ..     171     237 .. 0.95
   3 ?   -2.6   0.9       3.2   6.3e+03      15      43 ..     602     624 ..     600     631 .. 0.62

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 2.6e-14
         HR1  3 eelekklekElkireGAenllraleskktqnkkvrqeaeselsesnskielLreqLeelqasvqns 68
                +++ kk+e+E+++ ++A+++++     +tqn  vr++ ++e++e +++i++L+e+++elq+++  +
  KHJ31018.1  9 TSVFKKIERERALLNAANQMRQ-----QTQNELVRSRIDTEIREGRRNIQYLEERMQELQMRKKSQ 69
                56779*****************.....8*********************************98765 PP

  == domain 2  score: 49.3 bits;  conditional E-value: 1.9e-16
         HR1   1 rleelekklekElkireGAenllraleskktqnkkvrqeaeselsesnskielLreqLeelqasvq 66 
                 +l+++e+kl++E+++ +G e+++++++   ++++k+r++a+++  es +ki++L+++L+++++ + 
  KHJ31018.1 171 MLTQIEFKLNVEKQYLKGVEKMVQLYA--IEGDRKSRADAAAKRIESTQKIQILKQALKRYEDLHI 234
                 689************************..9*******************************98775 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 3.2
         HR1  15 ireGAenllraleskktqnkkvrqeaese 43 
                 i++G++n  r       qn ++ ++a+++
  KHJ31018.1 602 IIDGIKNQKR------RQNTQASSTAQAK 624
                 7788888888......5555555555544 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   9.8   8.4e-14   1.7e-10       1      52 [.     475     524 ..     475     525 .. 0.97
   2 !   30.3  15.3   1.4e-10   2.9e-07       1      52 [.     543     594 ..     543     595 .. 0.97

  Alignments for each domain:
  == domain 1  score: 40.6 bits;  conditional E-value: 8.4e-14
                 --EEEE--SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS-SBTTC CS
        C1_1   1 HhwvhrnfkqptfCkhCgeflwgkekqglkCswCkllvHkkChekvpkecgc 52 
                 H++  ++f++ ++C+ Cg++l  k + g++C++Ck+++Hk+C++ v ++c  
  KHJ31018.1 475 HKFISQQFYNIMRCALCGDLL--KYSGGMQCEDCKYTCHKHCYTSVVTKCIS 524
                 *********************..***************************75 PP

  == domain 2  score: 30.3 bits;  conditional E-value: 1.4e-10
                 --EEEE--SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS-SBTTC CS
        C1_1   1 HhwvhrnfkqptfCkhCgeflwgkekqglkCswCkllvHkkChekvpkecgc 52 
                 H++++ +  + ++C+hCg +l ++ k + kC++C+l++H +C+++vp  cg+
  KHJ31018.1 543 HRFEKFSNMSANWCCHCGYILPFGKKNCRKCTECGLTCHAQCIHLVPDFCGM 594
                 9******9*************99***************************86 PP

>> Pkinase_C  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.9   3.3   9.7e-17   1.9e-13       1      46 []    1104    1144 ..    1104    1144 .. 0.98

  Alignments for each domain:
  == domain 1  score: 50.9 bits;  conditional E-value: 9.7e-17
   Pkinase_C    1 vesdeDtsNFDpeFTeedprdtppddmpagspltssvqenFrGFtY 46  
                  +++d+DtsNFD+eFT+ +p +tp++     s lt+ +qe+FrGF+Y
  KHJ31018.1 1104 IKDDTDTSNFDTEFTSVTPVLTPVQ-----SVLTQTMQEEFRGFSY 1144
                  799*********************9.....89*************9 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1     4e-06     0.008       2      94 ..     260     350 ..     259     361 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 4e-06
                 EEEEEEEEEESSSSSST...TSSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHHTT CS
          C2   2 klevtvieAknLpnkdk...kgssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstllsg 94 
                 +l +++   k++ +  +    + ++++++++++++ +a+Tr++++    +W+ +++    + ++ ++e++V+d+ +  +   +G + +++s++ ++
  KHJ31018.1 260 QLFIRIQAVKDVDHTTIsrfARGPETFITIKVEDNIVARTRTTRTG---RWEAEYHNVSVD-QANEIELTVYDKLS-DHRLPMGLLWVRISDIVEE 350
                 677888888888777664444449*****************76666...9*9777664444.6**********766.4444688888888885544 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       2.6   5.2e+03      19      46 ..     829     856 ..     828     881 .. 0.78
   2 ?   12.4   0.0   3.7e-05     0.074     158     256 ..     938    1030 ..     917    1063 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2.6
  Kinase-like  19 llkkgdrsvvfevkdqetgeplavkvfl 46 
                  +l+kg++++v++++ + t++  a+kv  
   KHJ31018.1 829 VLGKGNFGKVMLAEAKSTKQLYAIKVLK 856
                  7899999999999999999999999854 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 3.7e-05
  Kinase-like  158 anLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPltla 253 
                    + +++g++  +++ dn+ll  +g +++ + + L +    +  s++      pE+++           k+  ++d W+ G+ iy +   + P+   
   KHJ31018.1  938 KYFHENGVIYRDLKLDNILLTLDGHIKMADYG-LCKEDMWYG-STTSTFCGTPEFMAPEIL----LDKKYGRSVDWWAFGVLIYQMLLQQSPFRGE 1027
                   68899*************************97.777777777.677777778*****9888....566999******************9999765 PP

  Kinase-like  254 tee 256 
                    e+
   KHJ31018.1 1028 DED 1030
                   554 PP

>> DUF892  Domain of unknown function (DUF892)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.4   0.00031      0.63      17      73 ..      18      74 ..      13      81 .. 0.92
   2 ?   -1.6   0.1       1.2   2.5e+03     118     142 ..     208     232 ..     180     242 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00031
                HHHHHHHHHHHHHH-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------.-HH CS
      DUF892 17 EkqllkalpkmakaaespeLkaaleqHleeTegqierLeqvferlgesasekkcdam 73
                E+ ll+a ++m ++ +++ +++++++ ++e ++ i+ Le+ +++l ++++ +  d m
  KHJ31018.1 18 ERALLNAANQMRQQTQNELVRSRIDTEIREGRRNIQYLEERMQELQMRKKSQDIDNM 74
                8899*****************************************999888776665 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.2
                 HHHHCTT-HHHHHHHHHHHHHHHHH CS
      DUF892 118 alAeqlgekeaaklLeqtleeekat 142
                 a+A++++ ++  ++L+q l+  ++ 
  KHJ31018.1 208 AAAKRIESTQKIQILKQALKRYEDL 232
                 6777777777777777777765555 PP

>> zf-RING_9  Putative zinc-RING and/or ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   7.0     0.012        24     176     198 ..     501     522 ..     484     529 .. 0.74
   2 ?    6.8  10.9    0.0029       5.8     157     191 ..     555     586 ..     547     595 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.012
   zf-RING_9 176 erCekCkavfHkeClkkkekkec 198
                 ++Ce+Ck ++Hk+C+++  + +c
  KHJ31018.1 501 MQCEDCKYTCHKHCYTSVVT-KC 522
                 57*************76654.35 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0029
   zf-RING_9 157 iCelCkseellfpfqlktverCekCkavfHkeClk 191
                  C  C     + pf +k++++C++C+ ++H++C++
  KHJ31018.1 555 WCCHC---GYILPFGKKNCRKCTECGLTCHAQCIH 586
                 44444...599**********************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1165  (0.0649785); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.84u 0.28s 00:00:01.12 Elapsed: 00:00:00.43
# Mc/sec: 7947.24
//
Query:       KHJ31019.1  [L=225]
Description: putative class e vps protein of the escrt-iii complex [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-33  115.8  17.3    1.5e-33  115.8  17.3    1.7  2  Snf7      Snf7
  ------ inclusion threshold ------
      0.018   15.4  14.9       0.26   11.6   6.3    2.2  2  YlqD      YlqD protein
       0.12   12.3   6.9       0.27   11.1   6.9    1.7  1  Ist1      Regulator of Vps4 activity in the MVB pathway
        7.4    7.0  12.9        2.7    8.4  10.1    1.8  2  CENP-H    Centromere protein H (CENP-H)


Domain annotation for each model (and alignments):
>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.8  17.3   3.4e-37   1.5e-33       2     169 ..      21     185 ..      20     196 .. 0.95
   2 ?   -0.7   0.1      0.21   9.4e+02     135     149 ..     209     223 ..     195     225 .] 0.77

  Alignments for each domain:
  == domain 1  score: 115.8 bits;  conditional E-value: 3.4e-37
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
        Snf7   2 airsLrkaerkldkkqeslekkikkleaelkklakkgnkdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqgakamkamnkk 100
                  +rsL k+ r+ld+++ +le+++kkl +e+kk ak g++ ++++ +K+++r++++++++++++ +l+++sl i++  +  ++++amk+++ ++ +mn+ 
  KHJ31019.1  21 HQRSLEKTLRELDRERIKLENQEKKLVQEIKKSAKNGQMGACKIQAKDLVRTRRYVEKFSAMRTQLQAISLRIQTVRTSEQMMQAMKGATGILGNMNRS 119
                 589************************************************************************************************ PP

                 TCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTT-.GGTTHHHHHHHHHHHHHHHHHCSH.HHHHHHHTXX CS
        Snf7 101 vdidkidklmdeiedqmekaeeisEalsrsldda.deedEeeleaeLdaLeqelgdeelldesvklpevP 169
                 ++++ ++++  e+e++++++++ +E++++++dd+   edE++ e++++++++e+g +     + ++ e P
  KHJ31019.1 120 MNLPALQRIALEFERENDIMDQRQEMMDDAIDDVtGLEDEADGEEIVEQILEEIGVDL----KISMGETP 185
                 **********************************999*****************9987....44444444 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.21
                 GGTTHHHHHHHHHHH CS
        Snf7 135 deedEeeleaeLdaL 149
                 ++  +++l+a Ld L
  KHJ31019.1 209 NDSIDDDLQARLDSL 223
                 778899******998 PP

>> YlqD  YlqD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   6.3   5.9e-05      0.26      19      85 ..      19      88 ..      10      91 .. 0.71
   2 ?    8.9   2.9   0.00042       1.9      32     102 ..      82     172 ..      72     187 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 5.9e-05
        YlqD 19 eelqqqlqaqieqldkelqqLefqakrlikeikkqsaq.qieeiqeqvek..ekserlekkkqllqqleq 85
                ++ q++l++ +++ld+e  +Le q+k+l++eikk  ++ q+ + + q++   + ++  ek + ++ ql+ 
  KHJ31019.1 19 RKHQRSLEKTLRELDRERIKLENQEKKLVQEIKKSAKNgQMGACKIQAKDlvRTRRYVEKFSAMRTQLQA 88
                467899**************************99877785555555555411444445666666666655 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00042
        YlqD  32 ldkelqqLefqakrlikeikkqsaq.................qieeiqeqvekekserlekkkqllqqleqvqkLel...gsevkqgqves 102
                 + ++lq +++  + + ++ +  +a                  + ++i  ++e+e + + ++++ +++ +++v  Le    g+e++++ +e+
  KHJ31019.1  82 MRTQLQAISLRIQTVRTSEQMMQAMkgatgilgnmnrsmnlpALQRIALEFERENDIMDQRQEMMDDAIDDVTGLEDeadGEEIVEQILEE 172
                 444444433333333322222222124555668888888888*********************************9622257777777765 PP

>> Ist1  Regulator of Vps4 activity in the MVB pathway
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   6.9   6.1e-05      0.27       7     157 ..      28     173 ..      22     180 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6.1e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTT--SSSSSHHHHHHHHHHHHHH-TTTTTH CS
        Ist1   7 aiqrlkllqkkkealakqarrdiaqlLengkeekArirveqliredillelleilelycelllarlsllekqkeldeelkEAvssliyAaprvselkEL 105
                 +++ l+  + k e++ k+  ++i +  +ng+   ++i++++l+r  +++e +  + + ++ +  r++++++++++ + +k A  +++   +r  +l+ L
  KHJ31019.1  28 TLRELDRERIKLENQEKKLVQEIKKSAKNGQMGACKIQAKDLVRTRRYVEKFSAMRTQLQAISLRIQTVRTSEQMMQAMKGAT-GILGNMNRSMNLPAL 125
                 56667777889999************************************************************999999875.455555555577777 PP

                 HHHHHHHHTTS-HHHHHHHHTT-T.T--HHH..HHHHS-----HHHHHHHHHHH CS
        Ist1 106 kelrdllaekyGkefakaavenkdngVnekv..vkklsvktpskelvekylkeI 157
                 + +   + +       ++++++++++ ++ +  v+ l+ ++  +e+ve++l+eI
  KHJ31019.1 126 QRIALEFERE------NDIMDQRQEMMDDAIddVTGLEDEADGEEIVEQILEEI 173
                 7776555432......23333333333333322455666666666666666666 PP

>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4  10.1   0.00061       2.7      15      85 ..      15      96 ..      10     113 .. 0.71
   2 ?   -2.7   0.0       1.7   7.6e+03      61      61 ..     142     142 ..     117     172 .. 0.60

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00061
      CENP-H 15 llklsqelrelqeeltevekenlrlkrknrelaaellelakekesek...........eklkeelekleaelkksrqrwrvv 85
                +++l +  r+l++ l e+ +e+++l++++++l++e+ + ak+ +               ++ e+ ++++++l++   r+++v
  KHJ31019.1 15 AERLRKHQRSLEKTLRELDRERIKLENQEKKLVQEIKKSAKNGQMGAckiqakdlvrtRRYVEKFSAMRTQLQAISLRIQTV 96
                67899999****************************5444444433367887777777445555555555555544444444 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.7
      CENP-H  61 k 61 
                 +
  KHJ31019.1 142 R 142
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1625  (0.0906353); expected 358.6 (0.02)
Passed bias filter:                      627  (0.0349713); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 1620.36
//
Query:       KHJ31020.1  [L=610]
Description: putative signal recognition particle 68 kda protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.9e-162  542.2   5.8   2.4e-162  541.8   5.8    1.0  1  SRP68     RNA-binding signal recognition particle 68
  ------ inclusion threshold ------
      0.054   13.2   0.0       0.15   11.8   0.0    1.8  1  DUF5053   Domain of unknown function (DUF5053)
       0.56   10.9   6.3        6.2    7.5   1.0    3.3  3  SlyX      SlyX


Domain annotation for each model (and alignments):
>> SRP68  RNA-binding signal recognition particle 68
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  541.8   5.8    4e-166  2.4e-162       5     559 .]      19     571 ..      17     571 .. 0.95

  Alignments for each domain:
  == domain 1  score: 541.8 bits;  conditional E-value: 4e-166
                 -HHHHHHHHHHHHHHHHHHTT--SS----SS-TT.--HHHHHH-THHHHHHHHHHHHHHHHHHHHHHHTCTTTTTS-HHHHHHHHHHHHHHHHHHHHHH CS
       SRP68   5 DYqrYrqyltrrLrrlRkkLkfatgkrgkyakka.itaeqvatdvrylhllLltaERaWAyamalKaehsadkkgitgrkRshivsRLrKAaklAeeLv 102
                  + +Yr++lt+r+ +lRkkL++at+ r+k a +  +t++++a+d ++ hllLlt+ERaWA+am++++ h  + + it+++Rshi+s+L+K + +A +L 
  KHJ31020.1  19 NWLAYRKQLTKRINNLRKKLGVATKPRAKCAGRVeVTKDDIAQDLKFGHLLLLTSERAWANAMSMREVHLGERRSITSSTRSHIISKLQKSTIYARNLL 117
                 5679*********************************************************************************************** PP

                 HHHHC.S.-S--HHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHH.TTTHHHHHHHTHH...HHHHHHHHHCT-SSS--HHHHHHH CS
       SRP68 103 ellse.assgadertkLEarAYaallrGallfekqqWekalesyskaraiyeaLakvt.seefkdllsetveelePsiRYcaYqlkeprtapsetiark 199
                 ++l++ ++  a+ +++LE rAYaa+l+Gal+fe+++We +l+ y+++r+iy+ La +t ++ +++lls+ v+   PsiRYc Yq++++r  +++ ia++
  KHJ31020.1 118 KVLQSdNICDANVNDVLEVRAYAATLSGALEFERHKWEISLKYYAESRIIYSTLAAATkNDIYQELLSDPVD---PSIRYCTYQMQISRLLSINLIAQR 213
                 ****99999***************************************************************...************************ PP

                 HHHH-.XXXXXXXXXXXXXXXXXXXXXXXX.X...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XX...XXXXXXXXXXXXXXXXXXXXXX CS
       SRP68 200 afekaendllqskiekldpealkeqaaskssk...apseitWrgrevkvedakirlalaavqeakaelee..es..kssakekaaaYdkvLiasqDavd 291
                 +f+++ ++ l + ie+ld+ al+++ a+++s+   +ps+itWr+r++++e++ i lal++vq a+++l+e  +   ++  +e+a+aYd++L+a+qDav 
  KHJ31020.1 214 YFPSS-DAWLIAVIERLDSGALNNELAKSRSEddiVPSTITWRSRTINIENSVIILALVSVQMAENKLSEslSVipSTRTRERASAYDDILTALQDAVY 311
                 *****.******************9998777799************************************76225669********************* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXX.X......XXXXXXXXXXXXXXXXXXXXXXXXX CS
       SRP68 292 atkqaidelekegvaqsdkrmqslqilrtavnyeklswrieRnrvlvgeadgklaeessakskkkk.k......egrklakleElvrLydallqslesi 383
                 atk+ id+l++eg +++d+r+q+lq+++ta+ny+++swri+Rnr+l+ge dg   e+++ + +k   +       +++l +l+E+v+Lyd++lqsl+si
  KHJ31020.1 312 ATKHTIDQLSQEGISDDDQRIQDLQVIQTAINYDMISWRIDRNRILLGEGDGIYLENKNYQLAKDDtQrkgkisIQKRLVRLQEKVVLYDSILQSLNSI 410
                 ****************************************************99998887777666447888999************************ PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       SRP68 384 kelpgvaadeelaeeleakkayfrAlrclyiarshalaskyaeAlALlkrAlelaeealeelsksdaksk.peslevlleelqeLadelkgelqrarAl 481
                 k+l g+aad++l +++++k  yf +lrcl+iarsh+l  + ++AlAL+ +A++++++a+  +s+  + ++   +++v+ + ++ L+  l+ e qr+rAl
  KHJ31020.1 411 KDLAGIAADTSLLKDINSKYDYFSSLRCLSIARSHSLLFQNRNALALFFQASSRCNSAHAYISSIMDIEDpSMKISVSNSAVERLKALLNFETQRHRAL 509
                 *****************************************************************995555899************************* PP

                 XXX..XXXXX.............XXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       SRP68 482 veleelkkeeeslkkslsklslsekaaakkkkkpllerLdeypssggevdlknlvelPPklepvpvKPiflDvAlNyI 559
                 ve+++l   e              ++ ++ +k pl+erL+e+ps+g  vdl+nlv +PP lep pvKP+f+D A+NyI
  KHJ31020.1 510 VEFSNLIDTE--------------QNCEDVDKIPLIERLSEFPSKG--VDLSNLVVYPPVLEPSPVKPLFFDAAWNYI 571
                 ***8665555..............122256789**********944..9****************************9 PP

>> DUF5053  Domain of unknown function (DUF5053)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.4e-05      0.15       3      25 ..     201     223 ..     199     238 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.4e-05
     DUF5053   3 ildivslsyiAkkYFgKsksWly 25 
                 i+ ++s++ iA++YF  s +Wl 
  KHJ31020.1 201 ISRLLSINLIAQRYFPSSDAWLI 223
                 8899*****************96 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       2.3   1.4e+04      35      47 ..      26      38 ..      25      45 .. 0.65
   2 ?    7.5   1.0     0.001       6.2      12      39 ..     296     323 ..     293     341 .. 0.81
   3 ?    4.7   0.1    0.0081        48       2      24 ..     387     409 ..     386     411 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 2.3
                HHHHHHHHHHHT- CS
        SlyX 35 rlqrqlrllaerl 47
                +l+++++ l+++l
  KHJ31020.1 26 QLTKRINNLRKKL 38
                5666666666666 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.001
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        SlyX  12 lafqedtieeLndvvaeqqqqidrlqrq 39 
                  +  +d + +L+d+v++  ++id+l ++
  KHJ31020.1 296 ASAYDDILTALQDAVYATKHTIDQLSQE 323
                 56679999****************9875 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.0081
                 HHHHHHHHHHHHHHHHHHHHHHH CS
        SlyX   2 eerleeLEiklafqedtieeLnd 24 
                 ++rl++L++k+   +  +++Ln 
  KHJ31020.1 387 QKRLVRLQEKVVLYDSILQSLNS 409
                 79*******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (610 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       756  (0.0421663); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 4032.48
//
Query:       KHJ31021.1  [L=1062]
Description: putative translation regulator protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-16   59.2   8.4      4e-05   23.7   0.1    7.9  9  PPR_2           PPR repeat family
      2e-11   43.8   0.3     0.0048   17.0   0.0    5.5  7  PPR_3           Pentatricopeptide repeat domain
    7.6e-09   35.2   5.9       0.84   10.0   0.1    8.3 10  PPR             PPR repeat
    0.00025   20.5   0.7        1.3    8.3   0.2    4.0  3  PPR_long        Pentacotripeptide-repeat region of PRORP
  ------ inclusion threshold ------
       0.16   12.1   2.8        0.2   11.7   0.1    2.8  3  ARL2_Bind_BART  The ARF-like 2 binding protein BART


Domain annotation for each model (and alignments):
>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1     0.067   2.4e+02       8      27 ..     201     220 ..     194     221 .. 0.86
   2 ?    0.7   0.0      0.17   6.1e+02       9      27 ..     235     253 ..     234     254 .. 0.86
   3 ?   -3.5   0.0       3.6   1.3e+04       6      19 ..     341     354 ..     340     375 .. 0.72
   4 ?   -1.2   0.0       0.7   2.5e+03       3      28 ..     409     434 ..     407     437 .. 0.84
   5 !   11.4   0.0   8.1e-05      0.29       9      43 ..     486     521 ..     483     521 .. 0.89
   6 !   23.7   0.1   1.1e-08     4e-05       1      49 [.     514     562 ..     514     563 .. 0.95
   7 !   16.3   0.1   2.3e-06    0.0083       5      49 ..     625     669 ..     622     670 .. 0.96
   8 !    5.9   0.0    0.0042        15      21      48 ..     677     704 ..     672     706 .. 0.91
   9 ?   -3.2   0.1       2.9   1.1e+04       5      20 ..     935     951 ..     932     956 .. 0.68

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.067
       PPR_2   8 tlIsglckkgkveeAfklfn 27 
                  +I+++++k ++ eA+k+ n
  KHJ31021.1 201 YVINAFLRKQNLLEAVKVHN 220
                 58***************965 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.17
       PPR_2   9 lIsglckkgkveeAfklfn 27 
                 ++ + +k++ +eeA+kl++
  KHJ31021.1 235 ILRYTVKNEIWEEAYKLWK 253
                 5778899999*******96 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 3.6
       PPR_2   6 yNtlIsglckkgkv 19 
                 y+ +I+ l k ++ 
  KHJ31021.1 341 YTNVITSLIKSKNE 354
                 89999999987664 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.7
       PPR_2   3 vvtyNtlIsglckkgkveeAfklfne 28 
                   +y + +  + ++g+ +    lfn+
  KHJ31021.1 409 RAAYRICLREFSRQGDAKTVHALFNQ 434
                 56788899999999999999999986 PP

  == domain 5  score: 11.4 bits;  conditional E-value: 8.1e-05
       PPR_2   9 lIsglckkgkveeAfklfneMkkr.glePnsyTysi 43 
                 l++ ++++g+ve+  klfn+ k+  g+eP+    +i
  KHJ31021.1 486 LLHVHARRGEVEDLEKLFNQIKSSyGIEPDILCWNI 521
                 7999*******************55*****877665 PP

  == domain 6  score: 23.7 bits;  conditional E-value: 1.1e-08
       PPR_2   1 pdvvtyNtlIsglckkgkveeAfklfneMkkr.glePnsyTysilikglc 49 
                 pd+ ++N+ +s+++k ++++  ++ f++  ++ +l+P+ yT  +++ +lc
  KHJ31021.1 514 PDILCWNIRLSAYMKIRDLDRVYECFEQILENqNLRPDHYTLGTMM-ALC 562
                 8999***************************65*************.888 PP

  == domain 7  score: 16.3 bits;  conditional E-value: 2.3e-06
       PPR_2   5 tyNtlIsglckkgkveeAfklfneMkkrglePnsyTysilikglc 49 
                 ++N+l+ g++ k+++    ++++ M ++++e +  Tys  +++l+
  KHJ31021.1 625 IWNSLLIGYVLKRDLPNVNRILKFMTENNIEYDQDTYSAFMQALA 669
                 7*****************************************996 PP

  == domain 8  score: 5.9 bits;  conditional E-value: 0.0042
       PPR_2  21 eAfklfneMkkrglePnsyTysilikgl 48 
                  A  lf+ M k g +P+ +   +l+ g+
  KHJ31021.1 677 AARVLFEVMPKSGTKPTLFNCAVLLGGY 704
                 6899**************9999999886 PP

  == domain 9  score: -3.2 bits;  conditional E-value: 2.9
       PPR_2   5 tyNtlIsglck.kgkve 20 
                  +Nt+ ++l +     +
  KHJ31021.1 935 NWNTYVKYLSRlSSYTR 951
                 69999999988444455 PP

>> PPR_3  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.88   3.1e+03      18      38 ..     341     361 ..     340     372 .. 0.83
   2 ?   -2.7   0.0       1.8   6.4e+03       8      29 ..     367     388 ..     365     392 .. 0.84
   3 !   12.7   0.0   2.9e-05       0.1      16      60 ..     481     526 ..     477     529 .. 0.92
   4 !    7.8   0.0   0.00098       3.5      10      43 ..     511     544 ..     509     546 .. 0.92
   5 !    5.9   0.0    0.0037        13       6      44 ..     543     581 ..     540     584 .. 0.91
   6 !   13.3   0.0   1.8e-05     0.065      18      59 ..     626     667 ..     624     669 .. 0.95
   7 !   17.0   0.0   1.3e-06    0.0048       1      58 [.     644     702 ..     644     705 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.88
       PPR_3  18 YthLLtayanagnkklalevl 38 
                 Yt  +t  ++ +n++l+l+  
  KHJ31021.1 341 YTNVITSLIKSKNEDLVLQSY 361
                 99999**********998855 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.8
       PPR_3   8 rkgikldvvtYthLLtayanag 29 
                 +k+++++    th L+++ n  
  KHJ31021.1 367 NKNFQISQAALTHVLRLSCNRH 388
                 78999999999****9988765 PP

  == domain 3  score: 12.7 bits;  conditional E-value: 2.9e-05
       PPR_3  16 vtYthLLtayanagnkklalevlermkkk.gikPtvvtyNailgvi 60 
                 +++  LL++ a+ g+ +++++ ++++k   gi+P ++ +N+ l+++
  KHJ31021.1 481 NDFAPLLHVHARRGEVEDLEKLFNQIKSSyGIEPDILCWNIRLSAY 526
                 8999***********************855**********999988 PP

  == domain 4  score: 7.8 bits;  conditional E-value: 0.00098
       PPR_3  10 gikldvvtYthLLtayanagnkklalevlermkk 43 
                 gi++d+  ++  L+ay++ ++++++ e +e++ +
  KHJ31021.1 511 GIEPDILCWNIRLSAYMKIRDLDRVYECFEQILE 544
                 9****************************99866 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.0037
       PPR_3   6 merkgikldvvtYthLLtayanagnkklalevlermkkk 44 
                 +e++++++d +t  +++ ++ +  ++ +a  ++   k+ 
  KHJ31021.1 543 LENQNLRPDHYTLGTMMALCTYRADLARARDIFRMAKEM 581
                 589******************************988875 PP

  == domain 6  score: 13.3 bits;  conditional E-value: 1.8e-05
       PPR_3  18 YthLLtayanagnkklalevlermkkkgikPtvvtyNailgv 59 
                 +++LL +y++ +++  ++++l+ m ++ i+   +ty+a +++
  KHJ31021.1 626 WNSLLIGYVLKRDLPNVNRILKFMTENNIEYDQDTYSAFMQA 667
                 699***********************************9987 PP

  == domain 7  score: 17.0 bits;  conditional E-value: 1.3e-06
       PPR_3   1 silremerkgikldvvtYthLLtayanagnkklalev.lermkkkgikPtvvtyNailg 58 
                 +il+ m +++i++d  tY + ++a a ++   la +v +e m k g kPt+    ++lg
  KHJ31021.1 644 RILKFMTENNIEYDQDTYSAFMQALAITRQPYLAARVlFEVMPKSGTKPTLFNCAVLLG 702
                 688999****************************999468899*******988888877 PP

>> PPR  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.16   5.9e+02       6      23 ..     202     219 ..     201     221 .. 0.92
   2 ?   -2.4   0.0       2.2   7.9e+03      13      24 ..     242     253 ..     240     253 .. 0.78
   3 ?   -0.5   0.0      0.52   1.9e+03       2      21 ..     340     359 ..     339     368 .. 0.78
   4 ?   -2.2   0.0       1.8   6.6e+03       3      25 ..     412     434 ..     411     436 .. 0.83
   5 !    5.9   0.0    0.0049        18       6      28 ..     486     508 ..     485     510 .. 0.92
   6 !   10.0   0.1   0.00024      0.84       2      29 ..     518     545 ..     517     546 .. 0.94
   7 ?   -2.2   0.1       1.9   6.8e+03       2      30 ..     554     582 ..     553     583 .. 0.77
   8 ?    2.2   0.0     0.074   2.7e+02       2      20 ..     589     607 ..     588     612 .. 0.87
   9 !    7.9   0.0    0.0011       4.1       2      31 .]     625     654 ..     624     654 .. 0.95
  10 ?   -0.3   0.0      0.45   1.6e+03       2      25 ..     660     683 ..     659     689 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.16
         PPR   6 lIsgycknGkleeAlelf 23 
                 +I+++ ++ +l eA++++
  KHJ31021.1 202 VINAFLRKQNLLEAVKVH 219
                 79*************997 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.2
         PPR  13 nGkleeAlelfk 24 
                 n  +eeA +l+k
  KHJ31021.1 242 NEIWEEAYKLWK 253
                 5558*****996 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.52
         PPR   2 tynslIsgycknGkleeAle 21 
                 +y+ +I ++ k+ + + +l+
  KHJ31021.1 340 IYTNVITSLIKSKNEDLVLQ 359
                 69*********999887776 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 1.8
         PPR   3 ynslIsgycknGkleeAlelfke 25 
                 y + ++ +++ G+ + +  lf++
  KHJ31021.1 412 YRICLREFSRQGDAKTVHALFNQ 434
                 667778899*****999999985 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.0049
         PPR   6 lIsgycknGkleeAlelfkeMke 28 
                 l++++++ G++e+ ++lf+++k+
  KHJ31021.1 486 LLHVHARRGEVEDLEKLFNQIKS 508
                 7899****************997 PP

  == domain 6  score: 10.0 bits;  conditional E-value: 0.00024
         PPR   2 tynslIsgycknGkleeAlelfkeMkek 29 
                 ++n+ +s+y k ++l+ + e+f++++e+
  KHJ31021.1 518 CWNIRLSAYMKIRDLDRVYECFEQILEN 545
                 6**********************99886 PP

  == domain 7  score: -2.2 bits;  conditional E-value: 1.9
         PPR   2 tynslIsgycknGkleeAlelfkeMkekG 30 
                 t  +++  +    +l  A ++f+  ke++
  KHJ31021.1 554 TLGTMMALCTYRADLARARDIFRMAKEMD 582
                 56688888888888889999999888765 PP

  == domain 8  score: 2.2 bits;  conditional E-value: 0.074
         PPR   2 tynslIsgycknGkleeAl 20 
                 + n+l+ ++++n++++eA 
  KHJ31021.1 589 MVNCLVICLVRNNLHSEAD 607
                 579**************96 PP

  == domain 9  score: 7.9 bits;  conditional E-value: 0.0011
         PPR   2 tynslIsgycknGkleeAlelfkeMkekGi 31 
                 ++nsl+ gy+ +++l  + +++k M e++i
  KHJ31021.1 625 IWNSLLIGYVLKRDLPNVNRILKFMTENNI 654
                 6************************99986 PP

  == domain 10  score: -0.3 bits;  conditional E-value: 0.45
         PPR   2 tynslIsgycknGkleeAlelfke 25 
                 ty++ +++++  +++  A +++ e
  KHJ31021.1 660 TYSAFMQALAITRQPYLAARVLFE 683
                 899999999888887777666654 PP

>> PPR_long  Pentacotripeptide-repeat region of PRORP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.1   4.1e+03      72     105 ..     355     389 ..     339     399 .. 0.70
   2 !    6.2   0.0    0.0016       5.7      91     151 ..     481     542 ..     403     554 .. 0.67
   3 !    8.3   0.2   0.00037       1.3      15     152 ..     556     721 ..     544     744 .. 0.65

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHH.TT----HHHHHHHHHHHHHTT- CS
    PPR_long  72 argfevfeamka.kgvspnEatvtalarlaaaked 105
                 + +++ ++a++  k+ + + a++t + rl  +++d
  KHJ31021.1 355 DLVLQSYRALRRnKNFQISQAALTHVLRLSCNRHD 389
                 44566666665546777788899999998887776 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0016
                 HHHHHHHHHHHHTT-HHHHHHHHHHHH.HH-S---HHHHHHHHHHHHHTT-HHHHHHHHHHH CS
    PPR_long  91 atvtalarlaaakedgdlafelvkeme.kagvsPrLRsyaPaLaayckagdadkaleveehl 151
                   ++ l ++ a +++ +  ++l ++++ ++g++P +  ++  L ay+k +d+d+ +e  e++
  KHJ31021.1 481 NDFAPLLHVHARRGEVEDLEKLFNQIKsSYGIEPDILCWNIRLSAYMKIRDLDRVYECFEQI 542
                 347788999999999999999999998688*************************9986654 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.00037
                 HHHHHHHHHHT-HHHHHHHHHHHHHSSS---HHHHHHHHHHHHHC.HCSTTTHHHH............................HHHHHHHHHHHHHTT CS
    PPR_long  15 rrqldkCskekDaaaAlelydkavaegvrlaqyhynvllylcskaeaaseskknka............................largfevfeamkakg 85 
                  + +  C+ ++D+a+A +++  a++ ++ l+    n+l+  +++ + +se  +  +                            l ++ ++ + m++++
  KHJ31021.1 556 GTMMALCTYRADLARARDIFRMAKEMDIPLSFAMVNCLVICLVRNNLHSEA-DIVCrksttmaligsktqiwnslligyvlkrdLPNVNRILKFMTENN 653
                 5567789****************9999999999999987555444322221.11111122334666666777777777776666677777777777777 PP

                 ----HHHHHHHHHHHHHTT-HHHHHHHH.HHHHHH-S---HHHHHHHHHHHHHTT-HHHHHHHHHHHH CS
    PPR_long  86 vspnEatvtalarlaaakedgdlafelv.kemekagvsPrLRsyaPaLaayckagdadkaleveehlk 152
                 ++    t++a ++  a +++  la ++  + m k+g +P L   a +L  y   +d d     +e + 
  KHJ31021.1 654 IEYDQDTYSAFMQALAITRQPYLAARVLfEVMPKSGTKPTLFNCAVLLGGYLAIKDWDNFNRLHEYIL 721
                 77777777777776666666665554440445577777777777777777777777776666666555 PP

>> ARL2_Bind_BART  The ARF-like 2 binding protein BART
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.8   6.6e+03      43      65 ..     155     177 ..     130     201 .. 0.70
   2 ?   -3.7   0.1       3.5   1.3e+04      22      37 ..     645     660 ..     643     666 .. 0.75
   3 ?   11.7   0.1   5.7e-05       0.2      77     115 ..     878     916 ..     818     917 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.8
                     HHHHHHHHHHHHHHHHHHHHTT- CS
  ARL2_Bind_BART  43 ytdihkeYkklveklleslleei 65 
                      ++i ++++k++ k+l  l ++ 
      KHJ31021.1 155 SKNIQRNFRKILLKYLHHLTKDY 177
                     44555666666666666665554 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 3.5
                     HHHHHHHHHHTT--SS CS
  ARL2_Bind_BART  22 vqeFidencivFddee 37 
                     + +F+ en i++d+++
      KHJ31021.1 645 ILKFMTENNIEYDQDT 660
                     6789999998888765 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 5.7e-05
                     ....SS-GGSSHHHHHHHHGGG-HHHHHHHHHHHHHHHH CS
  ARL2_Bind_BART  77 ekslsekkevakkvfeqllaadDFeaFkkmMvkrnkele 115
                     +++ + ++e+++++f+ql+  + F +F k Mv+++k +e
      KHJ31021.1 878 TEHRKDTSEQETRYFHQLILNKPFTIFMKSMVAQKKTKE 916
                     33444455889*************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1062 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       967  (0.053935); expected 358.6 (0.02)
Passed bias filter:                      591  (0.0329634); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.78u 0.31s 00:00:01.09 Elapsed: 00:00:00.44
# Mc/sec: 7304.40
//
Query:       KHJ31022.1  [L=632]
Description: putative glycosyl transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (632 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1129  (0.0629706); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4400.08
//
Query:       KHJ31023.1  [L=225]
Description: putative srf-type transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-21   73.4   0.1    1.1e-20   72.8   0.1    1.3  1  SRF-TF    SRF-type transcription factor (DNA-binding and dime


Domain annotation for each model (and alignments):
>> SRF-TF  SRF-type transcription factor (DNA-binding and dimerisation domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.8   0.1   6.1e-25   1.1e-20       1      48 []      66     113 ..      66     113 .. 0.98

  Alignments for each domain:
  == domain 1  score: 72.8 bits;  conditional E-value: 6.1e-25
      SRF-TF   1 kIeneraRqvtFsKRrnGLfKKAsELsvLcgvevavvvfspngklytf 48 
                 +I ++++R++tFsKR++G++KKA+ELs+L+g++v ++v+s++g +ytf
  KHJ31023.1  66 FIADKSRRHITFSKRKAGIMKKAYELSILTGTQVLLLVVSETGLVYTF 113
                 699********************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1013  (0.0565006); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1677.37
//
Query:       KHJ31024.1  [L=507]
Description: putative phenylalanyl-trna synthetase alpha chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-84  282.8   0.1    3.1e-84  282.3   0.1    1.2  1  tRNA-synt_2d     tRNA synthetases class II core domain (F)
    2.1e-17   63.1   0.3      6e-17   61.7   0.3    1.8  1  PheRS_DBD3       PheRS DNA binding domain 3
    3.2e-08   33.3   0.0    0.00016   21.2   0.0    2.8  3  tRNA_synthFbeta  Phenylalanyl tRNA synthetase beta chain CLM 
    3.3e-05   23.1   0.2     0.0008   18.6   0.0    2.7  3  tRNA-synt_2      tRNA synthetases class II (D, K and N)
     0.0031   17.5   0.1     0.0083   16.1   0.0    1.7  2  tRNA-synt_2b     tRNA synthetase class II core domain (G, H, 
     0.0043   17.0   1.6       0.02   14.9   1.6    2.3  1  PheRS_DBD2       PheRS DNA binding domain 2


Domain annotation for each model (and alignments):
>> tRNA-synt_2d  tRNA synthetases class II core domain (F)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  282.3   0.1     1e-87   3.1e-84       2     243 ..     205     497 ..     204     499 .. 0.96

  Alignments for each domain:
  == domain 1  score: 282.3 bits;  conditional E-value: 1e-87
                   .-TSSCTSCTSHSB-SHHHHHHHHHHHHHHCTTCEESS.TTSEEEHHHHTSTTTSTTTSHHHCHTTSEBTCTSSS-..................... CS
  tRNA-synt_2d   2 idvtlpgkrieagklhpltkvleeikeiflelgfeeve.gpevesefynfdaLnvpqdhpaRdmqdtFylkkpeka..................... 76 
                   +++   g +++ag+lhpl+kv++e+++if+e+gfee+  ++ ve+ f+nfdaL+vpq+hpaRd+qdtFy+++p++a                     
    KHJ31024.1 205 YNFRSLGIDQHAGALHPLNKVRHEFRQIFFEMGFEEMPtNRFVETGFWNFDALFVPQQHPARDLQDTFYISDPSEAekphaensndqsdyekywenv 301
                   67778888999**************************9999*****************************9999999******************** PP

                   .....................ECESEEE-SSTHHHHHHHH.........TTS-SSEEEEEEEEEEBSST-SSSB-SEEEEEEEEEEETT--HHHHHH CS
  tRNA-synt_2d  77 .....................veekllLRthttavqirtl.........ekkkppikiisigrvfRrdavDathlaeFhqveglvvdenvsladlkg 143
                                        ++ +l+LRthtta++  +l          +k +p++++si+rvfR+++vDathlaeFhqveg+++d ++sl  l+ 
    KHJ31024.1 302 rqvhqdgkfgsigyrypwiekESLRLVLRTHTTAISTAMLfklastsrpGEKPLPARYFSIDRVFRNETVDATHLAEFHQVEGVIADYGLSLGALME 398
                   *******************99999*******************99988777889******************************************* PP

                   HHHHHHHHHCTSTEEEEEEECEETTEEEEEEEEEEECCSSSSEEEEEEEEEE-HHHHHHTT-.TTSEEEEEEEEHHHHHHHHHT-SSGHHHHTT... CS
  tRNA-synt_2d 144 vleellkklfgaevkvrfrpsyfpftePsaevdvylvekkkkwlEllgaGmvrpevleavgideevsgfafGlGveRlamlkygieDiRelven..d 238
                   ++e ++kk+ g e +++f+p+y+p+tePs+e++ ++ +  +k +E++++Gm+rpe+le++g+++++ +f++Gl++eR +m+ky++++iRel+ +  d
    KHJ31024.1 399 FMEIFFKKM-GIE-DLKFKPAYNPYTEPSMEIFSFH-KGLNKLVEIGNSGMFRPEMLESMGLPKDMCVFGWGLSLERPTMIKYKVNNIRELLGHkvD 492
                   *********.***.**********************.9*****************************************************999667 PP

                   HHHHG CS
  tRNA-synt_2d 239 lrflr 243
                   l f++
    KHJ31024.1 493 LSFIE 497
                   77766 PP

>> PheRS_DBD3  PheRS DNA binding domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.7   0.3     2e-20     6e-17       1      59 []      69     128 ..      69     128 .. 0.92

  Alignments for each domain:
  == domain 1  score: 61.7 bits;  conditional E-value: 2e-20
  PheRS_DBD3   1 ShEarvfaavpp.eggisqkel.kklggdpvakiGfskAmknkWikkdkgdgkvvrkvdsi 59 
                 ShEarvf+a+++  +g++++el + +g+++  kiG++kA+++kWi+k k++ ++v+ vdsi
  KHJ31024.1  69 SHEARVFKALREsVEGLTIQELeNIVGDKNTVKIGQGKAFRSKWIAKGKEN-RLVATVDSI 128
                 9*********978778******66789********************7777.7******98 PP

>> tRNA_synthFbeta  Phenylalanyl tRNA synthetase beta chain CLM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.38   1.1e+03     140     163 ..      26      48 ..      20      69 .. 0.75
   2 !    8.7   0.0   0.00036       1.1      11      44 ..     215     248 ..     211     318 .. 0.89
   3 !   21.2   0.0   5.4e-08   0.00016      95     210 ..     356     464 ..     329     466 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.38
  tRNA_synthFbeta 140 avdfydlkgivealleslgiekve 163
                      +++f dlk ++++l ++  i  +e
       KHJ31024.1  26 NYSFTDLKSALDRLIARSMI-LYE 48 
                      6789999*999999998887.443 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00036
  tRNA_synthFbeta  11 tegelnkeqklrrklrdllagaGlnEvitysfvs 44 
                       +g+l++ +k+r++ r++  ++G+ E+ t  fv 
       KHJ31024.1 215 HAGALHPLNKVRHEFRQIFFEMGFEEMPTNRFVE 248
                      567899**************************97 PP

  == domain 3  score: 21.2 bits;  conditional E-value: 5.4e-08
  tRNA_synthFbeta  95 edvrlFEigkvflkd.seeelpeeerhlaivltgkreeeswsekaravdfydlkgivealleslgiekvefepaehpalhpgrsAeikvdgk.. 185
                      +  r F i +vf+++  + +  +e +++ +v++               +   l +++e +++++gie+++f+pa +p+ +p  s+ei    k  
       KHJ31024.1 356 P-ARYFSIDRVFRNEtVDATHLAEFHQVEGVIADYG-----------LSLGALMEFMEIFFKKMGIEDLKFKPAYNPYTEP--SMEIFSFHKgl 435
                      5.799*********99888999***********999...........99********************************..57776644445 PP

  tRNA_synthFbeta 186 ....evGvlGelhpevleafdlkqrvyvf 210
                          e+G  G + pe+le+++l++ ++vf
       KHJ31024.1 436 nklvEIGNSGMFRPEMLESMGLPKDMCVF 464
                      7778**********************998 PP

>> tRNA-synt_2  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.18   5.4e+02      26      46 ..     223     243 ..     209     259 .. 0.86
   2 !   18.6   0.0   2.7e-07    0.0008      93     141 ..     358     407 ..     355     442 .. 0.80
   3 ?    0.4   0.0     0.092   2.8e+02     286     307 ..     465     486 ..     452     489 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.18
                  HHHHHHHHHHHHHTT-EE--- CS
                  xxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2  26 stvtkavrkyleengfieiet 46 
                  ++v + +r++++e gf e+ t
   KHJ31024.1 223 NKVRHEFRQIFFEMGFEEMPT 243
                  788899999999999999876 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 2.7e-07
                  EEEEEEEEE--S--BTTB-S-CEEEEEEEE.ET-SCHH.HHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx.xxxxxxxxxxxx RF
  tRNA-synt_2  93 rvfqiaraFRaEdsrtdrhlaEFtqieaem.sfieeed.imqvleeliksl 141
                  r+f+i r+FR+E ++++ hlaEF q+e  +  +      +m+++e ++k++
   KHJ31024.1 358 RYFSIDRVFRNETVDAT-HLAEFHQVEGVIaDYGLSLGaLMEFMEIFFKKM 407
                  9**************77.566******777234444445888888888776 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.092
                  EEEEEHHHHHHHHCT-SSGGGC CS
                  xxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 286 GlglGldRlvmlllgsesIrdv 307
                  G+gl+l+R +m+  + ++Ir++
   KHJ31024.1 465 GWGLSLERPTMIKYKVNNIREL 486
                  9*******************97 PP

>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       2.9   8.6e+03      67      92 ..     280     306 ..     278     309 .. 0.66
   2 !   16.1   0.0   2.8e-06    0.0083      18     134 ..     334     444 ..     317     476 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.9
                   EEEEESGGGHHHH.HHHHHHHHHHHHH CS
                   xxxxxxxxxxxxx.xxxxxxxxxxxxx RF
  tRNA-synt_2b  67 gyvfhaeasldds.lrdlikaisrife 92 
                   ++  hae+s d+s ++++++ + ++ +
    KHJ31024.1 280 AEKPHAENSNDQSdYEKYWENVRQVHQ 306
                   566688776666526678888777765 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 2.8e-06
                   HHHHHHHHHHHEE...EB.GG.SSEEEEEEEEEEBTTTSTBCTTTB-SEEEEEEEEEEESGGGHHHHHHHHHHHHHHHHHHTT.SCEEEEEEGTTSC CS
                   xxxxxxxxxxxxx...xx.xx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b  18 eetfvelirdevl...rs.kr.LPlklyqiqtkyRdEksdsrGLlRvreFhqkdgyvfhaeaslddslrdlikaisriferlglefraiielmsaks 109
                   ++  +++  +  +   r+ ++ LP +++ i +++R+E+ d      + eFhq +g++         sl  l++ ++ +f+++g+e  + +   +   
    KHJ31024.1 334 TAISTAMLFKL-AstsRPgEKpLPARYFSIDRVFRNETVDAT---HLAEFHQVEGVIADYGL----SLGALMEFMEIFFKKMGIEDLKFKPAYN--- 419
                   44444443333.2244777667****************9443...478*******9987766....7889999999*******99887776655... PP

                   BTTSEEEEEEEEETTTSEEEEEEEE CS
                   xxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b 110 adykdkkefeavsesltkgieigti 134
                   +  +++ e+    + l+k +eig  
    KHJ31024.1 420 PYTEPSMEIFSFHKGLNKLVEIGNS 444
                   4578888888888888888888765 PP

>> PheRS_DBD2  PheRS DNA binding domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   1.6   6.7e-06      0.02       1      32 [.     130     160 ..     130     161 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 6.7e-06
  PheRS_DBD2   1 DeVqekLkliqeGkadelddkeknELKKRKLl 32 
                 D ++++L+ i++ +    d+k  ++LKKRKL+
  KHJ31024.1 130 DSTRSQLQIIKKTRTY-PDPKIITDLKKRKLI 160
                 6677777777777665.589***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3785.62
//
Query:       KHJ31025.1  [L=370]
Description: putative rrna-processing protein utp23 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-06   27.1   0.0    7.3e-06   26.0   0.0    1.6  1  SpoIIE    Stage II sporulation protein E (SpoIIE)
     0.0021   17.7   0.1       0.37   10.4   0.0    2.2  2  PP2C      Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> SpoIIE  Stage II sporulation protein E (SpoIIE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   8.1e-10   7.3e-06       3     190 ..     115     365 ..     113     368 .. 0.68

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 8.1e-10
                 TEEEEEEEECSS.....SSHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHCHCTTSTT.......TTCEEEEEE..........EETTTTEEEEEE CS
      SpoIIE   3 grlalvvgDvvG.....hGleAalimgllrsalrelataglepaevlkrlnralardleee......erfaTavlav..........ydpstgkleyan 80 
                 gr++++  D+vG      G ++ l ++l++    + ++++l+  + +k+l++a ++ ++ +      +  +T++ a              +t  l++ n
  KHJ31025.1 115 GRYFIAANDGVGawssrPGGHSGLWARLILHFWAQEMEKDLNEPDPIKHLQNAYEKTIQATsesnicQGTTTVTGAQlyyqpscgklGTSATPLLYVTN 213
                 6888888888888888888888888888888888888888887777777777776666555677998444444444455333443333445556899** PP

                 ESSSSEEEEETTS.....TEEEEE--SS--..TTTSSS....T-EEEEEEE--TTEEEEEESCCCCSSS.......HHHHHHCCCHHCHHHHCT..... CS
      SpoIIE  81 aGhpppllvrpdg.....gtklllastglp..lGilpe....adyetaelelepgdtlllyTDGvtEar.......dsdgelfgkerllallasaeges 161
                 +G++ +l++rp +     +t+++ + +  p  lG  +      d+    +e+e++d++l ++DGv+++        +  + + +k +  ++ +s +++s
  KHJ31025.1 214 LGDSQVLVLRPRKskiifKTTQQWHRFDCPrqLGTNSPdtprQDASLDLVEIEENDIVLAVSDGVIDNLweheileNVMKSI-KKWESRKTDQSYKENS 311
                 ***********88888887888888888889***977676666777777889**************7775554443222222.2222222222222222 PP

                 .HCCHHHHHHHHHHH........................HTTSSSSS-EEEEEE CS
      SpoIIE 162 .leelldalveelle........................lgsgeleDDitllvl 190
                  ++e ++++ eel +                        + +g++ DDi+++++
  KHJ31025.1 312 gAAEQMKHVAEELMKaakaiatnphaespymehaleeglTIEGGKLDDISVVAA 365
                 366666666666666555588888888888888888888777899999999876 PP

>> PP2C  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   4.1e-05      0.37     113     141 ..     198     239 ..     134     244 .. 0.69
   2 !    5.2   0.1    0.0016        14     206     254 ..     269     333 ..     253     336 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 4.1e-05
                 E..........EEEEEESS-EEEEEETTEEE...EECS---S CS
        PP2C 113 k..........lyvAnvGDSravLcrkgnak...keltedHk 141
                            lyv+n+GDS++++ r +++k   k+  + H+
  KHJ31025.1 198 CgklgtsatplLYVTNLGDSQVLVLRPRKSKiifKTTQQWHR 239
                 244444455679*************99998876655555555 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0016
                 EEEEEE-HHHHTTSHHHHHHHHHHHHHHHHT................HHHHHHHHHHHHHHHCCH CS
        PP2C 206 efliLacdGlwdvlsdqeavdlvrdelekkk................speevaeelvdeaiargs 254
                 + ++ ++dG+ d l + e+ + v + ++k++                + + vaeel++ a+a ++
  KHJ31025.1 269 DIVLAVSDGVIDNLWEHEILENVMKSIKKWEsrktdqsykensgaaeQMKHVAEELMKAAKAIAT 333
                 4445569*********************9999999****99999998888999999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       830  (0.0462937); expected 358.6 (0.02)
Passed bias filter:                      595  (0.0331865); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.38
# Mc/sec: 2888.85
//
Query:       KHJ31026.1  [L=350]
Description: hypothetical protein EV44_g3302 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.021   14.9   0.0      0.046   13.8   0.0    1.5  1  Speriolin_C  Speriolin C-terminus
      0.092   12.4   1.5        0.2   11.4   1.5    1.5  1  DUF4219      Domain of unknown function (DUF4219)


Domain annotation for each model (and alignments):
>> Speriolin_C  Speriolin C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   5.1e-06     0.046      22     113 ..     219     314 ..     207     327 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 5.1e-06
  Speriolin_C  22 arlygftvsnipekikqvst...npltrkldeekrkaltkryeslmerLkklgynkkvHpel.veklvntyGiLkerpeakasekeayeepklLrk 113
                   r+ g+ +  i   ++       + +++++ + ++  +     ++m + k+ gy  + Hp+  +  +  tyG +++ +++ + e ++ e+++ L+ 
   KHJ31026.1 219 LRVAGYRLVSIFTNVEPDLYtakSVSNNEYRQLTKPSYLDTAVEIMRSFKTAGYCWDFHPATrSPDIFSTYGNINKSASNLMLECYTTETLTKLKD 314
                  47778888777777733222000223333444444555566789****************872678***********9998888888888887776 PP

>> DUF4219  Domain of unknown function (DUF4219)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.5   2.2e-05       0.2       4      15 ..     329     340 ..     328     341 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.2e-05
     DUF4219   4 tNYatWklrMkl 15 
                 t+Y+tW+++Mk+
  KHJ31026.1 329 TDYKTWSMKMKY 340
                 89*********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2486.08
//
Query:       KHJ31027.1  [L=449]
Description: putative ornithine decarboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-76  256.7   0.0    2.7e-76  256.2   0.0    1.2  1  Orn_Arg_deC_N    Pyridoxal-dependent decarboxylase, pyridoxal
      3e-19   69.1   0.0      4e-19   68.7   0.0    1.4  1  Orn_DAP_Arg_deC  Pyridoxal-dependent decarboxylase, C-termina


Domain annotation for each model (and alignments):
>> Orn_Arg_deC_N  Pyridoxal-dependent decarboxylase, pyridoxal binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  256.2   0.0     3e-80   2.7e-76       1     247 []      72     301 ..      72     301 .. 0.97

  Alignments for each domain:
  == domain 1  score: 256.2 bits;  conditional E-value: 3e-80
                    HHHHHHHHHHHHHHCTCCEEEEEGGG---HHHHHHHHHTTEEEEESSHHHHHHHHHCTTTGGGEEEEESS--HHHHHHHHHCTHTEEEESSHHHHH CS
  Orn_Arg_deC_N   1 lasierklkrwkkalprikvfYavKansdlavlellaelGlgldcaSkaElelvlaagvsperiifanpckqreelryalekgvkvvtvdnveele 96 
                    l++i r++ rwk +lpr+++fYavK+n+d++v+ ll++lG+g+dcaSkaE+e++l++gv+p rii+a+pck+++++rya+++g+k++t+dn +el+
     KHJ31027.1  72 LGEIYRQHIRWKINLPRVRPFYAVKCNPDPQVICLLEKLGTGFDCASKAEIEQILNIGVDPTRIIYAQPCKTNSYVRYAASRGIKQMTFDNTDELY 167
                    579********************************************************************************************* PP

                    HHHHHHCCEEEEEEEE-SCCSSSSTCCCSSSTTSSSSEEHCHHHHHHHHHHHHTTEEEEEEE---BSSC-SCHHHHHHHHHHHHHHHHHHHHT--- CS
  Orn_Arg_deC_N  97 klaklapeakvllRiktdvsaatcelistggessKFGaaleeavealleaakeenlqlvGvsfHvGSgvsdleafvkavekalklfdelaelGvkl 192
                    k++kl+pea+++lRi+td+s++ c+l      s KFGaa+ +++e+ll++a+e++l ++G+sfH+GSg+sd  +f kav +a  ++++++  G++l
     KHJ31027.1 168 KIKKLYPEAELFLRISTDDSSSLCRL------SLKFGAAI-DSTEQLLDLARELDLSITGISFHIGSGASDPLSFRKAVLDASIVLNQATARGFNL 256
                    **************************......********.99***************************************************** PP

                    SEEE--S-BS-HCSTTSSSSTHHHHHHHHHHHHHHHHHTSSS-EEEE--SHHHHG CS
  Orn_Arg_deC_N 193 kiLdvGGGfgveyeeeeeplkleeiaekirealeeafpgdkevtiiaEpGRalva 247
                    ++Ld+GGGf +  e      ++e +a ++++al++++p   ++++i EpGR++v+
     KHJ31027.1 257 RTLDIGGGFTS--E------NFELMAATLNKALDDYIP--FHINVIGEPGRYYVS 301
                    *********33..3......5899*************9..779**********95 PP

>> Orn_DAP_Arg_deC  Pyridoxal-dependent decarboxylase, C-terminal sheet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.7   0.0   4.4e-23     4e-19       2      98 .]     298     410 ..      57     410 .. 0.75

  Alignments for each domain:
  == domain 1  score: 68.7 bits;  conditional E-value: 4.4e-23
                      EEEEGGEEEEEEEEEEEEETC......EEEEEES--TTTS-HHHHCTT-......S-EESBT..............T-SCEEC.EEEEEEEE-S CS
                      xxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxx......xxxxxxx..............xxxxxxxxxxxxxxxxxx RF
  Orn_DAP_Arg_deC   2 yvydeagvLvtrViavkesek......kkfvivdaGmndllrpalygsf......heipvke..............eeaekeeeeeeevdvvGp 69 
                      y +++a++L+++Via++++e+      ++++++++G+        yg+f      h++   +              ++a++++ +  e++++Gp
       KHJ31027.1 298 YYVSSAFTLACHVIARRTVEDfvtkkkSYMLYLNDGI--------YGNFssilfdHQV---PkarvlrtsnityfdDKAAEQSVDGIEYSIWGP 380
                      44459*************8877898889*********........9999777776333...03345667778888755557777899******* PP

                      SSSTT-EEEEEEEEEE.--TT-EEEESS-S CS
                      xxxxxxxxxxxxxxxx.xxxxxxxxxxxxx RF
  Orn_DAP_Arg_deC  70 tCesgDvlakdrelpe.levGdllafedaG 98 
                      tC+++D + ++  +++ ++vGd+l+fe++G
       KHJ31027.1 381 TCDGIDRISERACFDHiIDVGDWLYFENMG 410
                      *****************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 3097.25
//
Query:       KHJ31028.1  [L=544]
Description: hypothetical protein EV44_g0804 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.4e-14   51.7   0.0    1.4e-13   50.9   0.0    1.3  1  DNA_pol_A_exo1  3'-5' exonuclease


Domain annotation for each model (and alignments):
>> DNA_pol_A_exo1  3'-5' exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.9   0.0     8e-18   1.4e-13      18     173 ..     169     337 ..     152     340 .. 0.83

  Alignments for each domain:
  == domain 1  score: 50.9 bits;  conditional E-value: 8e-18
                     TTSSEEEEEEEEE-SSSTTS..SEEEEEEEEECS..SEEEEEECTTTTTT-HGHHHHHHHT-TTSEEEESSHHHHHHHHHHHHTS--SSEEEHHH CS
  DNA_pol_A_exo1  18 knlkvvavDtEttsldlisa..tlvliliqlgek..eeayiidplelgddvalealkrlledenitkvghnakfDlevlardfgielenlfdtml 108
                      n+kv+++D E+++  l  +  +  + liq+ ++   + +++  + +gd ++   l++++ed++++kvg ++k D   ++++  +e ++lf+++ 
      KHJ31028.1 169 MNSKVLGFDIEWKADALKFHgpRANVSLIQIANEerIGLFHVALYPHGDILVPPSLRKIMEDPTVSKVGVSIKSDCTRIKKHLNVECRGLFELSH 263
                     5788********98777555569999******998889999999999998899****************************************99 PP

                     HHHHTTHSTT.......SSHHHHHHHHHS..B---GHCC..TTSSTTTSSS-HHHHHHHHHHHHHTHHHHHHHHHH CS
  DNA_pol_A_exo1 109 aayvldyers.......hsLdsLaekylg..dleldkee..qiakwqkarplleeqllYAaeDadvllrlfkkLtk 173
                       ++ +++++        +L sLa+++ +  +l l k      ++w+  + l   q+ YAa+D ++ ++l++ L+ 
      KHJ31028.1 264 LFKLVKFSQNkdfgsidKKLVSLAKQVQEhfYLPLFKGGdvRNSDWS--NKLQLHQMVYAAADSYAAIQLYNTLEL 337
                     999******99******777777777777553444443311345666..666777889**************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 4017.71
//
Query:       KHJ31029.1  [L=453]
Description: putative tat pathway signal sequence [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       473  (0.0263818); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 3191.02
//
Query:       KHJ31030.1  [L=334]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.5e-36  123.6  21.4      1e-35  123.3  21.4    1.1  1  SUR7          SUR7/PalI family


Domain annotation for each model (and alignments):
>> SUR7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.3  21.4   5.8e-40     1e-35       3     210 ..      51     271 ..      49     273 .. 0.92

  Alignments for each domain:
  == domain 1  score: 123.3 bits;  conditional E-value: 5.8e-40
        SUR7   3 lillflslaalilllfailgsiknstpltsiylskfdls.gldlaqi.............gladvysfgvwgyC.dnsdvnytkCskpkagypfdp... 83 
                 ++++++   +li+l+++i+g ++n   ++s+y++k++l+ +++ ++              gl+d+y++g+w++C +++++++t Cskpk+ ++f+p   
  KHJ31030.1  51 TVSTIFFTTSLIFLILTIIGNTSNRRLIRSTYFLKLNLAnIIPASTPgdiilvnslarslGLHDFYQVGIWNFCeGYNNEGVTFCSKPKSRFWFNPvei 149
                 57899999*******************************66666666***************************99********************443 PP

        SUR7  84 l.eelnsesngkvdlPsnlrktlsklnnltkalfilhiialvlsfislvvgllaicvspdnsrllsflnlllsvlsflatllaalldtllfvfvrkkin 181
                 l +el s+ + +  lP +++k l++++ ++ ++f ++i ++++ f+s++v+ + +      sr+ s+  ++++++s+l+t++a +++t++ +++ ++ +
  KHJ31030.1 150 LlQELLSGATIA--LPADINKILHLIKLASSVMFSFFIAGACMNFVSIFVAPITLY-----SRWWSLPFFVWTFFSMLFTTIATVIVTAMSIIFVNVAT 241
                 145555555533..*****************************************9.....*************************************9 PP

        SUR7 182 .lkefgikaslglkflafaWlalaaallvv 210
                     ++i a++g+ f+ f+W+a a+ +l +
  KHJ31030.1 242 sQPGLNIGANIGKPFFIFMWIATAFNILGT 271
                 9999*********************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1122  (0.0625802); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2394.35
//
Query:       KHJ31031.1  [L=488]
Description: putative atp citrate subunit 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.6e-87  289.1   0.0    1.5e-86  288.5   0.0    1.2  1  Citrate_bind  ATP citrate lyase citrate-binding
    1.8e-07   30.9   0.0    2.9e-07   30.3   0.0    1.3  1  ATP-grasp_2   ATP-grasp domain
  ------ inclusion threshold ------
       0.11   10.6   0.0       0.15   10.1   0.0    1.1  1  Reovirus_M2   Reovirus major virion structural protein Mu-1/M


Domain annotation for each model (and alignments):
>> Citrate_bind  ATP citrate lyase citrate-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  288.5   0.0   2.5e-90   1.5e-86       1     176 [.     297     473 ..     297     474 .. 0.99

  Alignments for each domain:
  == domain 1  score: 288.5 bits;  conditional E-value: 2.5e-90
  Citrate_bind   1 relskeeayiaeldaktgaslKltvlnpkgriwtlvaGGGasvvyaDtiadlglaselanYgeysGapseeqtyeyaktildlmtre.krpdgkvli 96 
                   relskee+yiaeldaktgaslKlt+lnpkgr+wtlvaGGGasvvyaD+ia+ g+a+elanYgeysGap+e+qt++ya+t+ldl++r+  +p+gkvl+
    KHJ31031.1 297 RELSKEESYIAELDAKTGASLKLTILNPKGRVWTLVAGGGASVVYADAIASSGFADELANYGEYSGAPTETQTFHYARTVLDLLLRApLNPNGKVLF 393
                   7899**********************************************************************************9889******* PP

  Citrate_bind  97 iGggianftnvaatfkgiiraleelksklkehkvkiyvrrggpnyqeglkamkelgeelglpikvfgpethitaivklal 176
                   iGggianftnva+tfkg+i+al+e++ +l+eh+v+i+vrr+gpnyqeglk++k++g+el+l+++v+gpe+h+++iv+lal
    KHJ31031.1 394 IGGGIANFTNVASTFKGVIKALREVSPSLIEHNVQIWVRRAGPNYQEGLKNIKSVGQELKLKMHVYGPEMHVSGIVPLAL 473
                   ******************************************************************************98 PP

>> ATP-grasp_2  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.0   4.8e-11   2.9e-07      43     202 .]      75     228 ..      51     228 .. 0.72

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 4.8e-11
                  EEEE--SSSTCCCTTCEEEESSHHHHHHHHHCCTTSEEE-TTS-TT-EEE--EEEEE--..-ECEEEEEEEEEETTTTEEEEEEESSTTS-HHHHHHH CS
  ATP-grasp_2  43 vvKaQvlaGGRGKagGvklvkskeeakeaakellgkelvtkqtgkeGkkvekvlveeal..dikkElYlsivlDraskkvvviaSseGGvdiEevaak 138
                  v K   l+  RGK+g + l k+  eak+ + +  gk    +q ++   +  + lve  +  +   E+Y+ i   r  ++  v++ +eGGvd+ +v ak
   KHJ31031.1  75 VAKPDQLIKRRGKSGLLALNKTWPEAKAWIAARAGKP---QQVETVVGILRQFLVEPFVphPAGTEYYININSQR--EGDWVLFTHEGGVDVGDVDAK 167
                  5666666666777777777777777776666666653...44555566777777776551146789999876655..56678899**********998 PP

                  -GGGEEEEEEBTTTB-.-HHHHHHHHHHCT--CHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE CS
  ATP-grasp_2 139 kPekiikvaidpakgl.keeqareiakklglekelvkkaakiikklyklfveldatlvEiNPLvv 202
                    eki  +++d ++   +e+ a +++kk  ++k + + ++++i++ly ++v+++ t +EiNPLvv
   KHJ31031.1 168 A-EKIL-IPVDLSEYPsNETIASTLLKK--VPKGVHNVLVDFITRLYAVYVDCQFTYLEINPLVV 228
                  7.5654.566666554045556666655..6788999**************************96 PP

>> Reovirus_M2  Reovirus major virion structural protein Mu-1/Mu-1C (M2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   2.5e-05      0.15      33     121 ..     315     412 ..     307     464 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 2.5e-05
                  XXXXHHHHX--BEEEEESS...S---SGGGE.....--------B-EE-.-HHHHHHHHHHHHHHHTTHHHHHHTT---S---HHHH-EEEEEEEESS CS
  Reovirus_M2  33 ldlkPGvlnPtGklWraiG...tsvasadsl.....alvsdnkeeyvvv.tenaretltkavldlelwrelldalkvgsgsvvlsdlltivdgyvGat 121
                   +lk  +lnP G++W  +    +sv  ad++     a    n +ey+   te     ++++vldl l  +l  + kv+     +++++ +++++ G+ 
   KHJ31031.1 315 ASLKLTILNPKGRVWTLVAgggASVVYADAIassgfADELANYGEYSGApTETQTFHYARTVLDLLLRAPLNPNGKVLFIGGGIANFTNVASTFKGVI 412
                  689999*********988435699999999944444333456777875437888888899999999*************************9999984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (488 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       344  (0.0191868); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 3862.10
//
Query:       KHJ31032.1  [L=660]
Description: putative atp-citrate synthase subunit 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.5e-20   72.0   0.0    9.7e-17   61.1   0.0    2.9  2  Citrate_synt  Citrate synthase, C-terminal domain
    2.6e-18   66.5   0.0    6.8e-18   65.1   0.0    1.8  1  CoA_binding   CoA binding domain
    3.6e-14   52.9   0.0    7.2e-14   51.9   0.0    1.5  1  Ligase_CoA    CoA-ligase
      2e-05   24.4   0.0    0.00041   20.2   0.0    2.4  2  Succ_CoA_lig  Succinyl-CoA ligase like flavodoxin domain


Domain annotation for each model (and alignments):
>> Citrate_synt  Citrate synthase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0   0.00037       1.6      12      52 ..     387     429 ..     379     433 .. 0.81
   2 !   61.1   0.0   2.2e-20   9.7e-17     167     354 ..     431     626 ..     426     632 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00037
                   SEEEETTTTE.EEETTEEHHHHHHHHS-HHHHHHHHHH.SS-- CS
  Citrate_synt  12 isevdgekge.lrYRGydieeLaeekssfeevaylLlt.gelP 52 
                   is++  ++g+ l+Y G++i +  +e+  +  v+ lL++  +lP
    KHJ31032.1 387 ISTISDDRGQeLLYAGMPISDVFREEIGIGGVMSLLWFrRRLP 429
                   55665556777************999**********9944466 PP

  == domain 2  score: 61.1 bits;  conditional E-value: 2.2e-20
                   HHHHHHHHHHHHHS--SSSHHHHHHHHHHT.TT--HHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHSSGG.GHHHHHHHHHHTTTS--TTBC-SSSS CS
  Citrate_synt 167 eeaklldlalvlhaDHelnaSTfaarvvaS.tladlysaiaagigalkGplhgganeavlkmleeigsaeveveeylekvlakekerlpGfGHrvyk 262
                    + k+l+++l+l aDH+ ++S ++  +++  ++ dl+sa+++g+ +  G + gga + + + ++ + ++ +  +++++++ +++ + +pG+GH+v +
    KHJ31032.1 431 YASKFLEMVLMLTADHGPAVSGAMNTIITTrAGKDLISALVSGLLTI-GSRFGGALDGAADEFTTAFDKGLSPRDFVDSMRKQN-KLIPGIGHKVKS 525
                   57899*************99988776665449**************9.899999999888888888788779********8875.**********96 PP

                   ..S--HHHHHHHHHHHHHHTCHTHHHHHHHHHHHHHHHHHHHHCHHGCT-EB-THHHHHHHHHHT....T.--GGG.........HHHHHHHHHHHH CS
  Citrate_synt 263 ..ksDpRakilkelaeelaeekgkdpllklaeeleevapevlkekeeknlypNvDfysgvlyral....g.ipeel.........ftvlfaisRvaG 343
                     + D R++++ke++++ +    + ++l+ a ++e v+ +    k+  nl  NvD   +v +  l    g +  e             lf+++R++G
    KHJ31032.1 526 rnNPDLRVELVKEFVKKRFP---SCKMLDYALAVESVTTS----KK-DNLILNVDGVVAVCFVDLmrncGaFSAEEaedylrmgvLNGLFVLGRSIG 614
                   337788*********99987...667**************....34.89******999997654422223222221234356666889********* PP

                   HHHHHHHHH.HT CS
  Citrate_synt 344 wlAhileql.ad 354
                    +Ah+l+q+  +
    KHJ31032.1 615 LIAHYLDQKrLR 626
                   *******87444 PP

>> CoA_binding  CoA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.1   0.0   1.5e-21   6.8e-18       2      96 .]      41     146 ..      40     146 .. 0.98

  Alignments for each domain:
  == domain 1  score: 65.1 bits;  conditional E-value: 1.5e-21
                  TTEEEEEETTTSHHHHHHHHHHHHHHECEEEEEEC-TTTTTCEET.........TEEEESCHHHHHHHC.TTTEEEEES-HHHHHHHHHHHHH.TT-S CS
  CoA_binding   2 kdtkviviGagglgiaglyhfkeklkygikavfgvnprkvgtevl.........glpvyksvdeleekt.evdvavitvPaesaqeavdelve.agik 88 
                   +t+++v+G + ++ +g+++f++ +k+++++v+g+ ++++g+ v+          lpvy++v+++++k+ +vd+ v +++++s++++++el+e  +ik
   KHJ31032.1  41 DKTRCFVYGLQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSkmywgtsetLLPVYQDVEKAMAKHpDVDTIVNFASSRSVYSSTLELMEyPQIK 138
                  689******************************************************************88*************************** PP

                  EEEEESST CS
  CoA_binding  89 giviiteg 96 
                   i+ii+eg
   KHJ31032.1 139 SIAIIAEG 146
                  ******97 PP

>> Ligase_CoA  CoA-ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   0.0   1.6e-17   7.2e-14       1     151 [.     206     329 ..     206     331 .. 0.91

  Alignments for each domain:
  == domain 1  score: 51.9 bits;  conditional E-value: 1.6e-17
                 EESSHHHHHHHHHHHHHT..............T--BSEEEE-TSS--..........HHHHHHHHHHHHS-TT-SEEEEEEEESSSEHHHHHHHHHHHH CS
  Ligase_CoA   1 lvnGGtLayeamdlikealgdvasnkklknvlgseqheiidlGddaftkGrpHPmiDptkriealkklaadpevkvilldivlGygahedpaaellkai 99 
                 ++++G++++e++++i ++              + + +e +++G+d+++         +t++i++l +++adpe k++ll +++G g +e+ + e   a+
  KHJ31032.1 206 VSKSGGMSNELNNIIANT--------------TDGVYEGVAIGGDRYP---------GTTFIDHLLRYQADPECKILLLLGEVG-GVEEYRVIE---AV 277
                 579***************..............9**************9.........***************************.**9998755...55 PP

                 HHTT...--S-EEEEEECTTHH........HHHHHHHTTTSSEEE-SSHHHHHHH CS
  Ligase_CoA 100 keakaegrelpvvarvaGtead..pqels.eqakaleeagveiasskaqalraak 151
                 k+      ++p+va+ +Gt+a   + e++ ++a+  +++++e+a+ k+   r a+
  KHJ31032.1 278 KKGI---ITKPIVAWAIGTCASmfKTEVQfGHAGSFANSQLETAAVKNTSMRDAG 329
                 5555...666************88677778******************9999876 PP

>> Succ_CoA_lig  Succinyl-CoA ligase like flavodoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.049   2.2e+02      49      81 ..     131     161 ..     119     173 .. 0.74
   2 !   20.2   0.0   9.2e-08   0.00041       1     133 [.     200     341 ..     200     346 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.049
  Succ_CoA_lig  49 laedpetkvillylEsird..grkflsaarraark 81 
                   l e p++k+i++  E++ +  +r+ l +a    +k
    KHJ31032.1 131 LMEYPQIKSIAIIAEGVPErrAREILHIA----KK 161
                   56889************882234444443....33 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 9.2e-08
  Succ_CoA_lig   1 pGkialisqSGalalalldwaasrglgfskvvslGn..eadvdvadlleylaedpetkvillylEsird.grkflsaarraarkkpvvvlksGr..s 92 
                   +G+++ +s+SG++  +l +  a+   g+ + v +G      +++ d l  +++dpe+k++ll  E  +    + ++a+++   +kp+v++  G+  s
    KHJ31032.1 200 KGSVGYVSKSGGMSNELNNIIANTTDGVYEGVAIGGdrYPGTTFIDHLLRYQADPECKILLLLGEVGGVeEYRVIEAVKKGIITKPIVAWAIGTcaS 296
                   599*******************************9833457899999999999*********99966653789********************9887 PP

  Succ_CoA_lig  93 eagaraaashtgalagsd....avvdaafrqaGvlrvdsleelfd 133
                     +++    h g+ a+s+    av ++ +r aG+ + +++e+l +
    KHJ31032.1 297 MFKTEVQFGHAGSFANSQletaAVKNTSMRDAGFFVPKTFEDLPS 341
                   777888889999998876333266677799999999999998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (660 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       467  (0.0260472); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.40
# Mc/sec: 4928.25
//
Query:       KHJ31033.1  [L=328]
Description: hypothetical protein EV44_g3578 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       692  (0.0385967); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2325.92
//
Query:       KHJ31034.1  [L=241]
Description: hypothetical protein EV44_g3438 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00017   21.8   0.0    0.00039   20.6   0.0    1.6  1  rve       Integrase core domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   2.2e-08   0.00039      48     117 ..     167     235 ..     116     236 .. 0.73

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 2.2e-08
         rve  48 astvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpqdnGkvErfhrtlkd 117
                  +++  l  + ++ + g  pe+++   g+ + s +fr+ +++  i+++  +   pq+ G+vEr h+ l++
  KHJ31034.1 167 IHLWNMLKLCWIDIYIGP-PEVIVHGTGTNFDSAEFRQSASNQAIKLKCVPIEAPQSVGLVERYHGPLRR 235
                 333333333334444444.9**********************************************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1750.39
//
Query:       KHJ31035.1  [L=205]
Description: hypothetical protein EV44_g3254 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1567.07
//
Query:       KHJ31036.1  [L=237]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.014   14.7   0.9      0.044   13.2   0.3    1.8  2  DUF4003       Protein of unknown function (DUF4003)
       0.35   10.6   2.6        1.2    8.9   1.3    2.4  2  Lectin_N      Hepatic lectin, N-terminal domain
       0.61   10.8   4.9        4.2    8.1   2.9    2.3  2  Occludin_ELL  Occludin homology domain


Domain annotation for each model (and alignments):
>> DUF4003  Protein of unknown function (DUF4003)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.11   6.3e+02     134     162 ..      31      59 ..      28      73 .. 0.86
   2 ?   13.2   0.3   7.4e-06     0.044     144     203 ..     158     218 ..     154     230 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.11
     DUF4003 134 LtsedDyllaaLlAlsskeieellekiEe 162
                 + sedD+++++ +A+++ e+ +l e+  +
  KHJ31036.1  31 IASEDDVKTSLAVANRKTEVWTLSERLNN 59 
                 6799**************99999998765 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 7.4e-06
     DUF4003 144 aLlAlsskeieellekiEeiYkkLkekgFrkgndlqflshilaL.seedseekvarvielk 203
                 ++ A+++++i++ ++++E+ Y+ Lk++++ +++   ++ h+l+  +++d+ + ++++ +  
  KHJ31036.1 158 TFQAIKNMSIQTFVKEYEKRYNDLKDNNVITSEMERQMKHLLSRdNDDDPPNTIQQARQSQ 218
                 67799***************************************99999999999988764 PP

>> Lectin_N  Hepatic lectin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.15   9.1e+02      54      68 ..      47      61 ..      39      82 .. 0.83
   2 ?    8.9   1.3    0.0002       1.2      41      85 ..     133     177 ..     130     237 .] 0.75

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.15
    Lectin_N 54 qreLetLketfsnfs 68
                + e++tL+e ++n+ 
  KHJ31036.1 47 KTEVWTLSERLNNIE 61
                689999999999985 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0002
    Lectin_N  41 VvvcVigsqnsqLqreLetLketfsnfssstlaeiqalssqggsl 85 
                 +  +V+ + ++ L+ +L t+++ f  f +  ++ iq+   + ++ 
  KHJ31036.1 133 ILTSVVVQTQATLRTNLMTVRQRFWTFQAIKNMSIQTFVKEYEKR 177
                 677999999**************************9987743322 PP

>> Occludin_ELL  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.047   2.8e+02      65      96 ..      33      64 ..       2      65 .. 0.71
   2 ?    8.1   2.9   0.00071       4.2      10      71 ..     167     236 ..     159     237 .] 0.76

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.047
  Occludin_ELL 65 eykklkkdpeyqekkkrceyLkekLshiKkli 96
                  +  ++k + +  ++k+++  L+e+L+ i k++
    KHJ31036.1 33 SEDDVKTSLAVANRKTEVWTLSERLNNIEKMV 64
                  44678889999999*************99987 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00071
  Occludin_ELL  10 rerYkaeFnkeYkeYkelhaeleevskkfseLe.........relkelkegskeykkieeeilqeykklkk 71 
                    +++ +e++k Y+  k+ +   +e+++++++L          + + +++++s++y++ e+ i+ e+  lkk
    KHJ31036.1 167 IQTFVKEYEKRYNDLKDNNVITSEMERQMKHLLsrdndddppN-TIQQARQSQNYENWEKAIQAELDTLKK 236
                   5789999999999999999999999999999986777776633.333446667888888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1322  (0.0737353); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1890.74
//
Query:       KHJ31037.1  [L=718]
Description: putative lanosterol synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.9e-52  176.3   0.8    1.8e-49  168.5   0.1    2.5  3  SQHop_cyclase_C  Squalene-hopene cyclase C-terminal domain
    1.8e-39  135.6   0.7    5.2e-32  111.1   0.0    3.9  4  SQHop_cyclase_N  Squalene-hopene cyclase N-terminal domain
    1.8e-28   98.0   9.3    5.5e-10   38.8   0.0    5.5  5  Prenyltrans      Prenyltransferase and squalene oxidase repea
    8.3e-05   21.8   0.2    0.00045   19.3   0.3    2.2  2  TED_complement   A-macroglobulin TED domain
  ------ inclusion threshold ------
      0.014   14.7   5.2        1.8    7.8   0.0    4.7  6  Pec_lyase        Pectic acid lyase
      0.029   13.3   0.0       0.15   10.9   0.0    2.1  2  Cobalamin_bind   Eukaryotic cobalamin-binding protein
       0.11   12.4   0.0       0.21   11.5   0.0    1.4  1  Mago-bind        Mago binding


Domain annotation for each model (and alignments):
>> SQHop_cyclase_C  Squalene-hopene cyclase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.8   0.1     0.005        13     159     228 ..      69     137 ..      62     145 .. 0.79
   2 !    4.5   0.0    0.0059        15     165     216 ..     122     174 ..     103     188 .. 0.80
   3 !  168.5   0.1   7.2e-53   1.8e-49       4     318 ..     380     707 ..     378     708 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.005
                      HHHHHHHHHHHHHS-TTS----SSBSSHHHHHHHHHHHHHHTT--TTSHHHHHHHHHHHTT--TTSSBB- CS
  SQHop_cyclase_C 159 ealkraveylkkeqepdGsWfGrWGvnyiyGtwsvlsalaavgedleepvirkavdWlksvqnedGGWGe 228
                      ++++ + ++  + q p+G W   +G         ++ ++   +++  +++  +  ++l+++ n+dGGWG 
       KHJ31037.1  69 DSARAGWKFYSRLQLPQGHWACEYGGPSFL-LPGIIFSMYISDTPVPDEWKLEIFRFLSNHVNNDGGWGL 137
                      566778889999999999999988764332.2345677888888888999999999************95 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0059
                      HHHHHHHS-TTS--.--SSBSSHHHHHHHHHHHHHHTT--TTSHHHHHHHHHH CS
  SQHop_cyclase_C 165 veylkkeqepdGsW.fGrWGvnyiyGtwsvlsalaavgedleepvirkavdWl 216
                        +l ++ ++dG W    +G   ++Gt    +al+ +g ++e p++ +a + l
       KHJ31037.1 122 FRFLSNHVNNDGGWgLHLYGKSTVFGTCLYYVALRLLGYEKEVPLLSEARKCL 174
                      57888888899998445689999999999999999999999988888887666 PP

  == domain 3  score: 168.5 bits;  conditional E-value: 7.2e-53
                      HHHHHHHHHHHHHHT--...TT-HHHHHHHHHHHTT-B-S--GGGGT-TTS---BB-SSSS-TT--BHHHHHHHHHH...HTT---STHHHHHH CS
  SQHop_cyclase_C   4 vWdtalavlalleagve...aeeealkkaleWllekqvlvkGdWkvkrpevepgGwafefaneyyPdvddtavvvla...lkrvrlkeekkkee 91 
                      vWdt ++vla + ag +   + + +l ka ++l + q +++ d + ++p    gGw f  + + y   d +a  + +   l++     e   ++
       KHJ31037.1 380 VWDTEFSVLAATTAGFAfdaDLNRSLFKAHSFLERSQFRDNLDDEFRQPR--KGGWPFSTKTNGYIVSDCAAEGLKStlvLQNDCSFPELIDDS 471
                      9************99762224467899****************9999985..7*******9999986666665443310033333334556788 PP

                      HHHHHHHHHHHTB-TTSSB-SSSSSB--SGGGGSTT-SS..S-SSB--BHHHHHHHHHHHHHHT--...TTSHHHHHHH....HHHHHHS-TTS CS
  SQHop_cyclase_C  92 aiaraveWilglqsknGGwaafdkdntkellnkiPfadh..ealldpptadvtarvlellaqlgee...edsealkrav....eylkkeqepdG 176
                      +++  v+ +l +q++nGG+a+++k+  +e+l+ +  a+     +++++  + t+ vl +l++++++     ++ ++ra+     y+ + q++dG
       KHJ31037.1 472 RLKECVDTLLLMQNSNGGFASYEKNRGSEYLELLNPAEVfdRIMVEYSYPECTTAVLTALSKFKKHypgYRKSEIQRAIseahRYIIESQREDG 565
                      9999***************************99988775335799*****************9875444455556666533227********** PP

                      ----SSBSSHHHHHHHHHHHHHHTT--.TTSHHHHHHHHHHHTT--TTSSBB--GGGGT-GGGTT-SSBBHHHHHHHHHHHHHTTGGGSHHHHH CS
  SQHop_cyclase_C 177 sWfGrWGvnyiyGtwsvlsalaavged.leepvirkavdWlksvqnedGGWGesaesykdpklagkgestasqtaWallallaageveseavkr 269
                      sW+G W + + y t+ +l++l+avge+ +++p ++ a ++l s+q++dGGWGe+ +s ++++++++ +s   +t+Wa+lal+ ag  +   ++r
       KHJ31037.1 566 SWYGSWAICFTYATFFALQSLEAVGEQyKNSPRVKLACEFLLSKQKDDGGWGEHYTSCEEKRYIDHENSQVVNTSWATLALMHAGYPDPTPIQR 659
                      *************************986889*************************************************************** PP

                      HHHHHHHH--TTS-----S--EEEETTTEEEEETTHHHHHHHHHHHHHH CS
  SQHop_cyclase_C 270 GiaylletqkedGtWeeeaytgtGfPrvfylkyhlyrkvfPllalaryr 318
                      G++ ++++qk++G+W +ea  g  f ++ ++ y +y+  f ++al+ y+
       KHJ31037.1 660 GLDLIQNRQKANGEWLQEAVEGV-FNQTCMIGYPNYKFSFTIMALGAYK 707
                      *****************999875.***********************98 PP

>> SQHop_cyclase_N  Squalene-hopene cyclase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.1   0.0     2e-35   5.2e-32       9     201 ..      79     273 ..      72     364 .. 0.83
   2 ?    0.5   0.0       0.1   2.6e+02      42      72 ..     468     498 ..     452     502 .. 0.85
   3 !   10.9   0.0   7.1e-05      0.18     209     258 ..     528     576 ..     507     598 .. 0.70
   4 !   18.7   0.1   2.8e-07   0.00072       1      69 [.     550     621 ..     550     656 .. 0.80

  Alignments for each domain:
  == domain 1  score: 111.1 bits;  conditional E-value: 2e-35
  SQHop_cyclase_N   9 lslqkpdGhWvgeLeanvtitaeyillrefl.geddeeeeekiakylrsqqredGgWelypggpgdlsttveaYlALkllGdspdapalarAre 101
                       +lq p+GhW  e      +    i+ + +   +  +e + +i ++l ++ ++dGgW+l+  g++ ++ t   Y+AL+llG++++ p l +Ar+
       KHJ31037.1  79 SRLQLPQGHWACEYGGPSFLLPGIIFSMYISdTPVPDEWKLEIFRFLSNHVNNDGGWGLHLYGKSTVFGTCLYYVALRLLGYEKEVPLLSEARK 172
                      57899*************99999999999998888899999***************************************************** PP

  SQHop_cyclase_N 102 filarGGvakvrvfTrilLalfglvpweavpalPpelmlLPkwfpfniykfsswaRttivPllilsakkpvaklpr..evdldELfveppeevk 193
                      ++l+ GG+  +  + +i+L+ + l+ w++v+ +P+ l +LP+w+p++ +++ +  R++++P ++l++ + +++l++  ++  dE++ ep e+++
       KHJ31037.1 173 CLLSLGGAIGIPQWGKIWLSCLNLYGWDGVNCIPVDLWILPTWLPIHPSRWWVQCRVVYLPTSYLWSNRCTKPLNSllKQIRDEIYCEPFERIN 266
                      **************************************************************************99999999*******99999 PP

  SQHop_cyclase_N 194 yelrkekk 201
                      +  + + +
       KHJ31037.1 267 FAKHGN-N 273
                      984222.2 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.1
  SQHop_cyclase_N  42 ddeeeeekiakylrsqqredGgWelypggpg 72 
                      +d+ + ++++  l+  q+++Gg++ y +++g
       KHJ31037.1 468 IDDSRLKECVDTLLLMQNSNGGFASYEKNRG 498
                      6778899999**************9987765 PP

  == domain 3  score: 10.9 bits;  conditional E-value: 7.1e-05
  SQHop_cyclase_N 209 flaldkvlkllerlplkplrkrAlrkaeewilerqeasgglggifpamvn 258
                      ++al k+ k +  +  +++ +rA+++a+++i+e q+++g+++g +   + 
       KHJ31037.1 528 LTALSKFKKHYPGYRKSEI-QRAISEAHRYIIESQREDGSWYGSWAICFT 576
                      5555555555554444444.68999***************9998765443 PP

  == domain 4  score: 18.7 bits;  conditional E-value: 2.8e-07
  SQHop_cyclase_N   1 ikraaeallslqkpdGhWvgeLeanvtitaeyil.lrefl.geddee.eeekiakylrsqqredGgWelypg 69 
                      i++a+++++++q++dG W+g    + t  +   l   e + ++ ++  + + ++++l+s+q++dGgW+ ++ 
       KHJ31037.1 550 ISEAHRYIIESQREDGSWYGSWAICFTYATFFALqSLEAVgEQYKNSpRVKLACEFLLSKQKDDGGWGEHYT 621
                      6789*****************9999887665544234455444444426677889************98764 PP

>> Prenyltrans  Prenyltransferase and squalene oxidase repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.1    0.0063        16      13      30 ..      81      98 ..      77     100 .. 0.88
   2 !   22.2   0.2   3.3e-08   8.6e-05       6      44 .]     121     159 ..     116     159 .. 0.93
   3 ?    2.2   0.0     0.058   1.5e+02      10      22 ..     480     492 ..     473     495 .. 0.85
   4 !   30.9   0.2   6.5e-11   1.7e-07       5      40 ..     552     586 ..     549     590 .. 0.90
   5 !   38.8   0.0   2.1e-13   5.5e-10       2      41 ..     598     647 ..     597     650 .. 0.94

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0063
                 HSHTTS-BBSSTTSSBBH CS
  Prenyltrans 13 cQnedGGwggrpgsesdt 30
                  Q ++G+w++ +g++s++
   KHJ31037.1 81 LQLPQGHWACEYGGPSFL 98
                 688************986 PP

  == domain 2  score: 22.2 bits;  conditional E-value: 3.3e-08
                  HHHHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHHHHCT CS
  Prenyltrans   6 avefLlscQnedGGwggrpgsesdtyytywalaaLallG 44 
                  + +fL ++ n dGGwg++  + s++++t+  + aL llG
   KHJ31037.1 121 IFRFLSNHVNNDGGWGLHLYGKSTVFGTCLYYVALRLLG 159
                  5589*********************************98 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.058
                  HHHHSHTTS-BBS CS
  Prenyltrans  10 LlscQnedGGwgg 22 
                  Ll +Qn  GG+++
   KHJ31037.1 480 LLLMQNSNGGFAS 492
                  899********86 PP

  == domain 4  score: 30.9 bits;  conditional E-value: 6.5e-11
                  HHHHHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHH CS
  Prenyltrans   5 kavefLlscQnedGGwggrpgsesdtyytywalaaL 40 
                  +a ++++  Q+edG+w+g++  + +ty+t++al++L
   KHJ31037.1 552 EAHRYIIESQREDGSWYGSWAIC-FTYATFFALQSL 586
                  5669***************9999.**********99 PP

  == domain 5  score: 38.8 bits;  conditional E-value: 2.1e-13
                  HHHHHHHHHHHHSHTTS-BBSSTTS..........SBBHHHHHHHHHHHH CS
  Prenyltrans   2 dvekavefLlscQnedGGwggrpgs..........esdtyytywalaaLa 41 
                   v+ a+efLls+Q +dGGwg+++ s           s +++t wa++aL+
   KHJ31037.1 598 RVKLACEFLLSKQKDDGGWGEHYTSceekryidheNSQVVNTSWATLALM 647
                  5899*********************************************9 PP

>> TED_complement  A-macroglobulin TED domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.51   1.3e+03     125     299 ..     480     492 ..     462     498 .. 0.63
   2 !   19.3   0.3   1.8e-07   0.00045      49     167 ..     533     649 ..     516     681 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.51
                     HHTTB-TTS-B--SS-SS-TTCSSSTHCHHHHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHHS---HHHHHHHHHHHHHTT-THHHH CS
  TED_complement 125 LlseQkedGsFkeegsllnrkmkggvekevtLtAyvliaLleakeilelkkkvelsiskAleyLeekqaeelesvyalAilaYalalakseekae 219
                     Ll                                                                                             
      KHJ31037.1 480 LLL-------------------------------------------------------------------------------------------- 482
                     333............................................................................................ PP

                     HHHHHHHTTEEEETTEEEE--TTSSSGGGTSS-B----HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHTHTSTSSSSS CS
  TED_complement 220 ellksLkaeakeegnsvyWeedekskeeeklelkekasslevettaYaLLallsekdleladkivkWLtkqrnsaGGFsS 299
                                                                                            +ns+GGF+S
      KHJ31037.1 483 ----------------------------------------------------------------------MQNSNGGFAS 492
                     ......................................................................4566666666 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 1.8e-07
                     HTTGTTTS.HHHHHHHHHHHHHHHHHTCBETTSE.BBSSS..SS-BEHHHHHHHHHHHHHCHHHST--HHHHHHHHHHHHTTB-TTS-B--SS-S CS
  TED_complement  49 kteqltke.ikkkaleklekgyqrqlsykkadgs.ysafgkdssegstWLtAfvlkvlaqakefifideeeiseslewLlseQkedGsFkeegsl 141
                     k ++  +   k+++++ ++++   +++ +++dgs y+ +      + t  t f l++l+ + e+++ ++  ++ ++e+Lls+Qk+dG + e+ + 
      KHJ31037.1 533 KFKKHYPGyRKSEIQRAISEAHRYIIESQREDGSwYGSWA----ICFTYATFFALQSLEAVGEQYKNSP-RVKLACEFLLSKQKDDGGWGEHYTS 622
                     44444444578899999*****************899999....789*************999887665.6899*****************9888 PP

                     S-T.TCSSSTHCHHHHHHHHHHHHHHH CS
  TED_complement 142 lnr.kmkggvekevtLtAyvliaLlea 167
                      ++ +     + +v  t+++++aL++a
      KHJ31037.1 623 CEEkRYIDHENSQVVNTSWATLALMHA 649
                     7772333334778999********997 PP

>> Pec_lyase  Pectic acid lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.23   5.8e+02      59      85 ..      66      92 ..      61     108 .. 0.89
   2 ?    2.3   0.1     0.035        89     197     223 ..     331     357 ..     310     387 .. 0.72
   3 ?   -0.5   0.0      0.24   6.1e+02      65      84 ..     474     493 ..     470     506 .. 0.80
   4 ?    1.7   0.2      0.05   1.3e+02      40      85 ..     526     571 ..     484     583 .. 0.75
   5 ?    7.8   0.0    0.0007       1.8      58      93 ..     591     630 ..     575     639 .. 0.74
   6 ?   -2.9   0.0       1.3   3.4e+03      64      83 ..     657     676 ..     654     677 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.23
   Pec_lyase 59 kykdavrkglefllkaqYsnGgwpqfy 85
                 y+d++r g +f  + q ++G w   y
  KHJ31037.1 66 SYEDSARAGWKFYSRLQLPQGHWACEY 92
                69*********************8666 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.035
   Pec_lyase 197 ekikeavkaavkWfdkskvaglryekr 223
                 + +++a + av+Wf++s+ + l+ ++ 
  KHJ31037.1 331 APVNKAFHVAVTWFEESESERLQRHRE 357
                 45999**********998777766554 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.24
   Pec_lyase  65 rkglefllkaqYsnGgwpqf 84 
                 ++ ++ ll +q snGg+  +
  KHJ31037.1 474 KECVDTLLLMQNSNGGFASY 493
                 678999***********876 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.05
   Pec_lyase  40 atvtellflaevykatkdekykdavrkglefllkaqYsnGgwpqfy 85 
                 a +t l  + + y   ++++ + a+ ++  +++++q + G+w   +
  KHJ31037.1 526 AVLTALSKFKKHYPGYRKSEIQRAISEAHRYIIESQREDGSWYGSW 571
                 44455555556788889999999*******************7665 PP

  == domain 5  score: 7.8 bits;  conditional E-value: 0.0007
   Pec_lyase  58 ekykda..vrkglefllkaqYsnGgwpqfyPlkkg..Yse 93 
                 e+yk++  v+ + efll+ q + Ggw   y   ++  Y +
  KHJ31037.1 591 EQYKNSprVKLACEFLLSKQKDDGGWGEHYTSCEEkrYID 630
                 5666663367799****************97543322555 PP

  == domain 6  score: -2.9 bits;  conditional E-value: 1.3
   Pec_lyase  64 vrkglefllkaqYsnGgwpq 83 
                 +++gl+ + + q +nG w q
  KHJ31037.1 657 IQRGLDLIQNRQKANGEWLQ 676
                 57899999999999999977 PP

>> Cobalamin_bind  Eukaryotic cobalamin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.35   8.9e+02     252     274 ..     239     261 ..     229     263 .. 0.84
   2 ?   10.9   0.0   5.8e-05      0.15     191     264 ..     528     608 ..     524     615 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.35
                     HHHHHHHHHHHHHHHCTT---SH CS
  Cobalamin_bind 252 ewnCqktleallkeikqgaFqnp 274
                     ++ C+k l++llk+i+++ + +p
      KHJ31037.1 239 SNRCTKPLNSLLKQIRDEIYCEP 261
                     468**************999887 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 5.8e-05
                     HHHHHHC..TSSGGGHHHHHHHHHHHHHHHHHTB-TTS......-BSSTTTHHHHHHHHTTSSSTTCHHHHHHHHHHHHHH CS
  Cobalamin_bind 191 LtCvkrs.ekleeklraeiskaieslvekilsekkenG......liGniySTglAlQaLlvsseeekeewnCqktleallk 264
                     Lt +++  +++   +++ei++ai++  + i+++++e+G       i  +y T  AlQ L + +e++k++   + + e ll+
      KHJ31037.1 528 LTALSKFkKHYPGYRKSEIQRAISEAHRYIIESQREDGswygswAICFTYATFFALQSLEAVGEQYKNSPRVKLACEFLLS 608
                     555555523455556789********************54444447779******************98888888877776 PP

>> Mago-bind  Mago binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   8.1e-05      0.21       2      15 ..     554     567 ..     553     567 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 8.1e-05
   Mago-bind   2 eriIpaSqRpDGtv 15 
                 +r+I +SqR DG++
  KHJ31037.1 554 HRYIIESQREDGSW 567
                 699**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (718 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.64u 0.24s 00:00:00.88 Elapsed: 00:00:00.40
# Mc/sec: 5343.77
//
Query:       KHJ31038.1  [L=546]
Description: putative hydroxyproline-rich glyco protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.38
# Mc/sec: 4280.00
//
Query:       KHJ31039.1  [L=589]
Description: hypothetical protein EV44_g1296 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.12   13.0   3.3       0.42   11.3   3.3    1.9  1  YabA           Initiation control protein YabA
       0.44   11.0   3.2        2.8    8.4   1.2    2.8  3  Peptidase_M61  M61 glycyl aminopeptidase
       0.45    9.1   3.2       0.81    8.2   3.2    1.3  1  FapA           Flagellar Assembly Protein A


Domain annotation for each model (and alignments):
>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   3.3   7.1e-05      0.42       5      68 ..     123     186 ..     120     201 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 7.1e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXX CS
        YabA   5 elfdkleeleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekekkkelse 68 
                 +l++++e+++e  ++ +e+++  k++l +++ee ++L+ e e +++ l+e+++k k++ ++ ++
  KHJ31039.1 123 SLLEEFEHISEAKASYYEQFTLAKSKLLQIYEERDRLSKEMEVIQQILDETRDKLKNSYHQHQK 186
                 588999******************************************5544444443333322 PP

>> Peptidase_M61  M61 glycyl aminopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.079   4.7e+02      59      92 ..      71     104 ..      62     127 .. 0.78
   2 ?    8.4   1.2   0.00047       2.8      39     100 ..     130     190 ..     102     206 .. 0.79
   3 ?   -2.7   0.0       1.3   7.7e+03      89     111 ..     291     311 ..     278     350 .. 0.57

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.079
                    S-HHHHHHHHHHHHHHHHHSGGGGT--HHHHHHT CS
  Peptidase_M61  59 iseeeyleelaktlarlentpgrkvqslaessfd 92 
                    i+++++le l++++a++ ++ gr+v+sl+    +
     KHJ31039.1  71 INPAHILEVLRSRMAAILSKIGREVTSLNSYNSE 104
                    5678899999999999999999999999875554 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00047
                    HHHTHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHSGGGGT--HHHHHHTIIIIITT- CS
  Peptidase_M61  39 wvaEGlTsYygdlllarsgliseeeyleelaktlarlentpgrkvqslaessfdawiklyrs 100
                     + E   sYy++++la+s+l++  e +++l+k+++ +++   +++ +l++s +++ +k++ +
     KHJ31039.1 130 HISEAKASYYEQFTLAKSKLLQIYEERDRLSKEMEVIQQILDETRDKLKNS-YHQHQKFKSQ 190
                    5678889****************************9999998888888765.4555555555 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1.3
                    HHHTIIIIITT--TTHHHH---T CS
  Peptidase_M61  89 ssfdawiklyrsdensanskvsy 111
                    ss++++++++++  n++++  sy
     KHJ31039.1 291 SSIRNVSEIKKK--NINQNINSY 311
                    444444443333..222222222 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.2   0.00014      0.81     328     439 ..      95     209 ..      77     216 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00014
        FapA 328 v.gldepelkekl.keleeeleeleeeleklkkkikklpklka.ekqlesekkeqlkklletkeklkeeleeleeelkelkeeleskkeea.kikvnke 422
                 v +l+  +  e++ +e++++ +++++ +  l ++++++++ ka  +++    k++l ++ e++ +l++e+e ++++l+e  ++l++++ +  k k +k 
  KHJ31039.1  95 VtSLNSYNS-EEFfHEFQNLFHDFKRAQVSLLEEFEHISEAKAsYYEQFTLAKSKLLQIYEERDRLSKEMEVIQQILDETRDKLKNSYHQHqKFKSQKL 192
                 545663333.44448999999999999999999999999988878899999999*********************************666669999988 PP

        FapA 423 iypgvkikigkkkliik 439
                  ++   i+ g+ ++ ++
  KHJ31039.1 193 SCKDKNIYRGNSTYLMD 209
                 88888887777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (589 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1285  (0.0716716); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.38
# Mc/sec: 4667.44
//
Query:       KHJ31040.1  [L=574]
Description: putative rna splicing factor (pad-1) [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.5e-41  139.3   0.5    2.2e-19   69.1   0.0    3.4  3  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
      7e-23   81.5   0.1    1.9e-22   80.1   0.1    1.8  1  RBM39linker   linker between RRM2 and RRM3 domains in RBM39 p
    8.5e-05   22.3   0.0       0.12   12.2   0.0    2.8  3  RRM_occluded  Occluded RNA-recognition motif
  ------ inclusion threshold ------
      0.014   15.6   0.1       0.27   11.4   0.1    2.6  1  PHM7_cyt      Cytosolic domain of 10TM putative phosphate tra
      0.027   14.5   0.0       0.16   12.0   0.0    2.2  2  RRM_3         RNA binding motif
       0.03   14.4   0.0        1.4    9.1   0.0    2.5  2  RRM_7         RNA recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.0   9.8e-18   2.9e-14       1      66 [.     198     263 ..     198     266 .. 0.96
   2 !   69.1   0.0   7.2e-23   2.2e-19       1      70 []     297     366 ..     297     366 .. 0.98
   3 !   14.3   0.0   8.9e-06     0.027      20      69 ..     508     554 ..     499     555 .. 0.86

  Alignments for each domain:
  == domain 1  score: 52.6 bits;  conditional E-value: 9.8e-18
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETT CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklgg 66 
                 +fV  L+  +  +eL ++F+k+Gp+k++++v+d   g+skg+++VeF+++e+  +A++ l g+kl g
  KHJ31040.1 198 VFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDrVSGRSKGVGYVEFKKEESVPAAIQ-LTGQKLLG 263
                 89********************************************************.***99876 PP

  == domain 2  score: 69.1 bits;  conditional E-value: 7.2e-23
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 l+Vgn+++++te++L  +F++fG+ + ++l ++e+g+s+g++fV+F ++ +A++Ale++ng  l gr+++
  KHJ31040.1 297 LYVGNIHFSITESDLQNVFEPFGELEFVQLQKEEQGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPIR 366
                 8******************************************************************996 PP

  == domain 3  score: 14.3 bits;  conditional E-value: 8.9e-06
                 HT.TSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  20 sk.fGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ++ +G +++i l ++    s+g  + +F+     e+A++ lng+ +ggr +
  KHJ31040.1 508 EEkYGHVVHIALDPN----SQGDIYLKFDRVQGGENAIKGLNGRYFGGRMI 554
                 444****99999996....*****************************976 PP

>> RBM39linker  linker between RRM2 and RRM3 domains in RBM39 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.1   0.1   6.4e-26   1.9e-22       1      91 []     417     495 ..     417     495 .. 0.77

  Alignments for each domain:
  == domain 1  score: 80.1 bits;  conditional E-value: 6.4e-26
  RBM39linker   1 lDdddrgGvnLnatsRaaLMakLarsgtalsipaaaaaalqnsaaaaeaataveaaapaeaklasvavpiatecllLkNMFdpaeEtepdW 91 
                  lDd+d+g vn+n++sR+aLM+kLar+++++ +++   +     +  ++++  v++       l  v+v++a++c++LkNMFdpaeE +++W
   KHJ31040.1 417 LDDTDVGAVNFNNYSRDALMRKLARTDEPTPNAKGRDER---REILKPKT--VAN------PL-PVNVNMASRCVVLKNMFDPAEEVGENW 495
                  7************************99984444433333...23333322..111......13.499************************ PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.2   3.7e+03      16      38 ..     210     231 ..     196     263 .. 0.55
   2 !   12.2   0.0   4.1e-05      0.12      12      72 ..     305     369 ..     296     373 .. 0.89
   3 !    6.8   0.0     0.002       6.1      17      73 ..     502     559 ..     499     562 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.2
  RRM_occluded  16 ariralveekegeikkivLvpdh 38 
                   +++ a++e+  g++k+ ++v d 
    KHJ31040.1 210 KELIAFFEKV-GPVKEAQIVKDR 231
                   5556666766.666665555553 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 4.1e-05
  RRM_occluded  12 tvnkariralveekegeikkivLvpdheG.....AivefkdekiagkasLaLdgsefegkklrcGt 72 
                    ++++ +++++e+  ge++ ++L+ + +G      +v+f+d ++a  a+ +++g +++g+ +r+G 
    KHJ31040.1 305 SITESDLQNVFEPF-GELEFVQLQKEEQGrsrgyGFVQFRDPNQAREALEKMNGFDLAGRPIRVGL 369
                   69999*********.**************6666669****************************95 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.002
  RRM_occluded  17 riralveekegeikkivLvpdheGAi.vefkdekiagkasLaLdgsefegkklrcGtv 73 
                    +ra  eek g++++i L p+ +G i ++f+ ++    a+  L+g  f g+ ++   v
    KHJ31040.1 502 DVRAEAEEKYGHVVHIALDPNSQGDIyLKFDRVQGGENAIKGLNGRYFGGRMISATPV 559
                   6788888888**************9845666666666677789999999999987655 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   9.2e-05      0.27       2     140 ..     196     353 ..     195     361 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 9.2e-05
    PHM7_cyt   2 rTvlvtgiPkelrseeklkeffeelypgkvvesvqivrd.vkkldklveerekavrkleaalskykkngkklpkkr....................... 76 
                 rTv+v+++   lr++e l  ffe++ p k+    qiv+d v+   k v   e   +k+e + +  + +g+kl +                         
  KHJ31040.1 196 RTVFVQQLAARLRTKE-LIAFFEKVGPVKE---AQIVKDrVSGRSKGVGYVE--FKKEESVPAAIQLTGQKLLGIPiiaqlteaeknrqvrnpesvgst 288
                 8999999999999776.8899999988765...6888777888888888888..588888888888888888777788999999999999999999999 PP

    PHM7_cyt  77 ....pthklgflglkligkkvdaidyyrekleeldeeieeerekvkkkplgaaFvtfesersaaavak 140
                     p h+l   ++++   + d  + ++    el  e+ +++++++ + +g++Fv+f++ ++a ++++
  KHJ31040.1 289 stqiPFHRLYVGNIHFSITESDLQNVFEP-FGEL--EFVQLQKEEQGRSRGYGFVQFRDPNQAREALE 353
                 99999999999888865555666555544.4466..79999**999*****************99974 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.95   2.8e+03      27      37 ..     238     248 ..     209     273 .. 0.71
   2 ?   12.0   0.0   5.5e-05      0.16      13      59 ..     306     357 ..     299     367 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.95
                 -ECEEEE-TTS CS
       RRM_3  27 evayvdyekgd 37 
                  v+yv+++k++
  KHJ31040.1 238 GVGYVEFKKEE 248
                 45666665554 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 5.5e-05
                 --HHHHHHHCHCCS-ECEEEE-TTSSE.....EEEEESSHHHHHHHHHHHHH CS
       RRM_3  13 lsredikellsklgevayvdyekgdke.....gevrFkedeeakkalekate 59 
                 ++ +d++++++ +ge+++v ++k+++      g v+F ++++a++alek+  
  KHJ31040.1 306 ITESDLQNVFEPFGELEFVQLQKEEQGrsrgyGFVQFRDPNQAREALEKMNG 357
                 67899****************9987633333378**************9865 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.045   1.4e+02       4      70 ..     198     257 ..     195     280 .. 0.68
   2 ?    9.1   0.0   0.00048       1.4       3      61 ..     296     346 ..     295     357 .. 0.71

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.045
       RRM_7   4 vFvGGlPiDiteeelkatfkefgkvlvdwPkkaeskkkaaenskaakgyvflvfedeksvkaLleac 70 
                 vFv  l + +  +el+a f++ g+v+      a+  k +   s   kg  ++ f++e+sv a ++ +
  KHJ31040.1 198 VFVQQLAARLRTKELIAFFEKVGPVKE-----AQIVKDRV--SGRSKGVGYVEFKKEESVPAAIQLT 257
                 666666677777777777777776642.....33333332..33357889999******99887755 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00048
       RRM_7   3 kvFvGGlPiDiteeelkatfkefgkvlvdwPkkaeskkkaaenskaakgyvflvfedek 61 
                 +++vG +   ite++l++ f+ fg++   + + +++++ +       +gy f+ f d +
  KHJ31040.1 296 RLYVGNIHFSITESDLQNVFEPFGELE--FVQLQKEEQGR------SRGYGFVQFRDPN 346
                 579*********************974..44444333332......2477777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      259  (0.0144459); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 4119.81
//
Query:       KHJ31041.1  [L=146]
Description: hypothetical protein EV44_g3761 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       259  (0.0144459); expected 358.6 (0.02)
Passed bias filter:                      152  (0.00847788); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1097.57
//
Query:       KHJ31042.1  [L=609]
Description: hypothetical protein EV44_g5492 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (609 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       862  (0.0480785); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 4252.67
//
Query:       KHJ31043.1  [L=315]
Description: putative vhs domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.81    8.7   9.1        1.5    7.9   9.1    1.4  1  Atg14     Vacuolar sorting 38 and autophagy-related subunit 1


Domain annotation for each model (and alignments):
>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   9.1   8.2e-05       1.5      12      82 ..      24     110 ..      19     164 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 8.2e-05
       Atg14  12 iCe.sClrngperlyelrerlaklksekeslkkkiekalegke...............eaeqledkiknkkakleelksliadlrer 82 
                 +C   C+r+ ++  +e   rl +l ++ke++ ++i++a+                   ++e++++k  +k ++le+ k++ a++r +
  KHJ31043.1  24 YCTvICVRKKSDEQEEQESRLFNLEEQKETISSRISEAVIYSVnlinvlkqfnseeypKTETESKKKLTKDEALEKFKKDEAQKRIN 110
                 55415**********************************999988887777777777777777777777777777777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1598  (0.0891293); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2319.59
//
Query:       KHJ31044.1  [L=688]
Description: putative sulfate permease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-96  322.3  20.0    4.7e-96  321.8  20.0    1.2  1  Sulfate_transp  Sulfate permease family
    1.7e-12   47.0   0.0    3.6e-12   45.9   0.0    1.5  1  STAS            STAS domain
    0.00019   21.8  13.1      0.017   15.6   2.2    2.5  2  MFS_MOT1        Molybdate transporter of MFS superfamily
  ------ inclusion threshold ------
      0.071   13.5   0.0       0.14   12.5   0.0    1.5  1  STAS_2          STAS domain
       0.14   12.0  11.5        2.8    7.9   4.0    3.2  3  YrhK            YrhK-like protein
          1    9.5   4.6       0.97    9.6   1.0    2.7  2  YbgT_YccB       Membrane bound YbgT-like protein


Domain annotation for each model (and alignments):
>> Sulfate_transp  Sulfate permease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  321.8  20.0   1.6e-99   4.7e-96       2     379 ..      70     446 ..      69     447 .. 0.97

  Alignments for each domain:
  == domain 1  score: 321.8 bits;  conditional E-value: 1.6e-99
  Sulfate_transp   2 kgDliaGitvallaiPqalayallaglppiygLyssvvpqlvyalfGtsrqlavGpvavlslivgeiiakvaeeepekgieiattltllaGviqv 96 
                     ++DliaGit++ll+iPq+laya++a++p +ygL ss +p+l+ya++Gts++++ Gp++++ ++v+++i++  ++e+ +  +ia +lt+laGvi++
      KHJ31044.1  70 LHDLIAGITIGLLLIPQSLAYAKIATVPEQYGLLSSWIPPLIYAFMGTSKDVCPGPTSIIGVLVAQVIKDY-KDEEFSPQQIAGALTFLAGVISL 163
                     69*********************************************************************.999******************** PP

  Sulfate_transp  97 llGllRLgflveflseavlsGfiaGaaivillsqikvllglervskkeslvsvlsslftnlekvnlakvvlgllllvvLlvtkellkklkkl... 188
                     l+G++++gf+ +f+s ++lsGf+++a++  +lsq+  ++g +     + + + ++++f nl++++l ++++gl+++++L+++++  k + k+   
      KHJ31044.1 164 LVGTMKMGFVLSFISVPILSGFVSAAGLLTILSQVPAFFGNT---AGSGTARKIHDIFANLPEAKLNDTMIGLSCMIILILIEKAGKLWGKMnkv 255
                     *****************************************8...899999********************************999999888889 PP

  Sulfate_transp 189 .lvipapaelvavivatlvsaifelkreagvkivgei.psglpelslpkvdwsllsallpdalaialvglleaiavsksldkkkgykvdsnkELv 281
                      ++i + ++ ++++++t++s++++++ e+    + +  +  ++ ++lp  + sl++ l+  a+ai l  ++e++a++k++ +k+gyk+d+ +ELv
      KHJ31044.1 256 iWAIVVCRNAILILIFTIFSYFINRNAETPYFAISKTsEATINMPKLP--PTSLFRLLFGRAIAIFLAMSMEHLAIAKTFSRKNGYKIDGSQELV 348
                     99999******************9898888886655505569999999..99******************************************* PP

  Sulfate_transp 282 AlGfsNilsslfgglpatgafsrsavnikaGaktqlsglvsalvvllvllvltplleyiPkavLaaiiivagkglLvelkelkklwklskldfli 376
                      lG+sN++ ++f+++p  g+fsrsavn  +G+kt+lsg++++ +vl+ l+++t++l+ iP+a L+a++i+a+++lL+  ++++k w++s  df+ 
      KHJ31044.1 349 FLGVSNLINGFFPTIPGGGSFSRSAVNSDSGVKTALSGIITSGFVLISLYFFTGALYWIPQASLSAVVILAVWSLLIGPSTFYKYWRISFTDFIA 443
                     *********************************************************************************************99 PP

  Sulfate_transp 377 lla 379
                      ++
      KHJ31044.1 444 SMI 446
                     887 PP

>> STAS  STAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.0   1.2e-15   3.6e-12       8     101 ..     509     647 ..     502     664 .. 0.92

  Alignments for each domain:
  == domain 1  score: 45.9 bits;  conditional E-value: 1.2e-15
                 TTEEEEEEEEEESHHHHHHHHHHHHHHHHCCC..................................................-SEEEEEEEEEEEE-HH CS
        STAS   8 egililrldgpidfanaesfkeklkravgeeperve..........................................kkeslkslildlsavsfiDss 64 
                 e+ +i+ ++ pi f nae+ k +l +a++  ++ +                                           ++ ++   ildls+v +iD++
  KHJ31044.1 509 ENTIIFNFKQPIVFLNAERCKANLLEAYQRHSSLISrsniisespqakksvsgslsssnfssvdtlsmeptkysaldtSSMPILVYILDLSHVLYIDVT 607
                 5679**************************9877769*****************************************99******************* PP

                 HHHHHHHHHHHHH...HTT-EEEEES--HHHHHHHHHTTC CS
        STAS  65 GvraLkeilkelk...rigvevvlvnikpevreklektgf 101
                 G++aL +++k l+   + ++++ +v+i++++r +le++g 
  KHJ31044.1 608 GIQALADARKLLNdeaNYKIQWRFVGIRDSLRARLERAGW 647
                 *********9998554679******************996 PP

>> MFS_MOT1  Molybdate transporter of MFS superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   3.5   0.00014      0.41      10     109 ..      79     191 ..      76     192 .. 0.75
   2 !   15.6   2.2   5.5e-06     0.017      25     110 ..     326     422 ..     310     423 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00014
    MFS_MOT1  10 lglTllnlvialaalaslsltalllsvGlmnlltglfggv.Pmc....hgAgglaaqyrf........gartgaagillGlvllllgltgllerllrli 95 
                 +gl l++  +a+a++a++  +  lls+ +  l+ +++g    +c     + g+l+aq+ +        ++++++a  +l+ v+ ll  t+ +  +l++i
  KHJ31044.1  79 IGLLLIPQSLAYAKIATVPEQYGLLSSWIPPLIYAFMGTSkDVCpgptSIIGVLVAQVIKdykdeefsPQQIAGALTFLAGVISLLVGTMKMGFVLSFI 177
                 6788889999999999855554444444444554444432235567797888888886667777999999999999999888888888889******** PP

    MFS_MOT1  96 PksvlgglllgaGl 109
                  +++l g + +aGl
  KHJ31044.1 178 SVPILSGFVSAAGL 191
                 ************98 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 5.5e-06
    MFS_MOT1  25 a.............slsltalllsvGlmnlltglfggvPmc.hgAgglaaqyrfgartgaagillGlvllllgltgllerllrliPksvlgglllgaGl 109
                 +             +++ ++ l+++G+ nl+ g+f  +P     +  ++    +g +t+ +gi+++ ++l+  +++  +  l +iP++ l ++++ a +
  KHJ31044.1 326 HlaiaktfsrkngyKIDGSQELVFLGVSNLINGFFPTIPGGgSFSRSAVNS-DSGVKTALSGIITSGFVLISLYFF--TGALYWIPQASLSAVVILAVW 421
                 344555666677788899999******************986555555555.56*************999877765..88999*********9998866 PP

    MFS_MOT1 110 e 110
                 +
  KHJ31044.1 422 S 422
                 6 PP

>> STAS_2  STAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   4.8e-05      0.14      31      56 ..     596     621 ..     592     648 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.8e-05
      STAS_2  31 vDlsgvervDsaalalLlalartara 56 
                 +Dls+v ++D++++++L+++++ +  
  KHJ31044.1 596 LDLSHVLYIDVTGIQALADARKLLND 621
                 8********************98765 PP

>> YrhK  YrhK-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0011       3.4      32      53 ..     146     167 ..     140     169 .. 0.86
   2 ?    7.9   4.0   0.00093       2.8      12      47 ..     393     428 ..     381     431 .. 0.86
   3 ?   -3.0   0.5       2.4     7e+03       3      20 ..     466     483 ..     465     485 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0011
        YrhK  32 wkwqiagvwlFliGSilflirp 53 
                    qiag+ +Fl+G i++l+++
  KHJ31044.1 146 SPQQIAGALTFLAGVISLLVGT 167
                 4679***************986 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00093
        YrhK  12 iigsllFlvGSilflpnsefwkwqiagvwlFliGSi 47 
                 +++sl F+ G+++  p+ ++ + +i++vw  liG  
  KHJ31044.1 393 VLISLYFFTGALYWIPQASLSAVVILAVWSLLIGPS 428
                 579999999999999999988************955 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 2.4
        YrhK   3 yeaislandiigsllFlv 20 
                 + ++++++ +  s+ F +
  KHJ31044.1 466 FSILHIIFRMTFSSAFNI 483
                 78999***9*99999977 PP

>> YbgT_YccB  Membrane bound YbgT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.52   1.5e+03      15      26 ..     315     326 ..     310     326 .. 0.83
   2 ?    9.6   1.0   0.00032      0.97       8      20 ..     458     470 ..     458     473 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.52
   YbgT_YccB  15 lfgilnalwlEk 26 
                 +++i+ a+  E+
  KHJ31044.1 315 AIAIFLAMSMEH 326
                 689*****9996 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00032
   YbgT_YccB   8 LGvlLAvlfgiln 20 
                 +G++LAv+f+il+
  KHJ31044.1 458 IGIGLAVCFSILH 470
                 7**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (688 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 4984.24
//
Query:       KHJ31045.1  [L=174]
Description: putative 60s ribosomal protein l20 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.6e-54  182.0   0.9    4.6e-54  181.7   0.9    1.1  1  Ribosomal_L18A  Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A


Domain annotation for each model (and alignments):
>> Ribosomal_L18A  Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.7   0.9   2.5e-58   4.6e-54       2     120 ..       5     126 ..       4     127 .. 0.99

  Alignments for each domain:
  == domain 1  score: 181.7 bits;  conditional E-value: 2.5e-58
                     EEEEEEEEEEET....................................................................TEEEEEEEEEEESSH CS
  Ribosomal_L18A   2 keYeVvGrklpsekepepkvyrmrifapnevvak...wyflkklkkvkkanGeilavkkieekkptkvknygiwlrydsrsgthnfykeyrdlte 93 
                     +eY+V+Gr+lp+e++p+pk+yrmrifapn+vvak   wyfl kl+kvkk+nGei++++ i+ek+p kvkn+g+w+rydsrsgthn+ykeyr++++
      KHJ31045.1   5 TEYQVIGRHLPTETNPTPKLYRMRIFAPNTVVAKsrfWYFLMKLRKVKKSNGEIVSLNVISEKRPMKVKNFGVWIRYDSRSGTHNMYKEYREMSR 99 
                     79********************************************************************************************* PP

                     HHHHHHHHHHHHHHS---GGGEEEEEE CS
  Ribosomal_L18A  94 egaveqvYselgsrhrakrssIqIekv 120
                     ++ave++Y+++++rhr + +sI+I+kv
      KHJ31045.1 100 TDAVEALYQDMAARHRSRFRSIHILKV 126
                     *************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1357.35
//
Query:       KHJ31046.1  [L=582]
Description: hypothetical protein EV44_g4534 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0098   16.0   8.3      0.021   14.9   8.3    1.5  1  Mito_fiss_reg  Mitochondrial fission regulator
  ------ inclusion threshold ------
      0.055   13.5   9.9       0.12   12.5   9.9    1.5  1  PRIMA1         Proline-rich membrane anchor 1
          3    7.3  11.3        1.5    8.2   9.2    1.5  2  CAP_N          Adenylate cyclase associated (CAP) N terminal


Domain annotation for each model (and alignments):
>> Mito_fiss_reg  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   8.3   3.4e-06     0.021     159     216 ..     272     330 ..     257     343 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 3.4e-06
  Mito_fiss_reg 159 dllepksssaspslepssslp.pppppppppippespsvldssnsaielikqrrgakkt 216
                    + ++++s++++ +l++++s+p ppppppppp++++s+ v+++++ +++l+kq+ ++ +t
     KHJ31046.1 272 QKITQSSQPPPRNLRQRESPPsPPPPPPPPPPQSHSEIVIQEAEYSTKLSKQTVENLQT 330
                    333344444444455566655577777777878999999*************9886554 PP

>> PRIMA1  Proline-rich membrane anchor 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   9.9   1.9e-05      0.12      11      45 ..     272     309 ..     264     325 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.9e-05
      PRIMA1  11 ekvtescq...eacqcrrypplpppppppppprllslt 45 
                 +k+t+s q   ++ + r+ pp pppppppppp+  s  
  KHJ31046.1 272 QKITQSSQpppRNLRQRESPPSPPPPPPPPPPQSHSEI 309
                 5555555511123456999*************875554 PP

>> CAP_N  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0      0.81   4.9e+03     215     231 ..     153     171 ..     151     216 .. 0.39
   2 ?    8.2   9.2   0.00026       1.5     231     264 ..     274     308 ..     264     328 .. 0.50

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.81
                 STTS----TT..SBE.... CS
       CAP_N 215 httGltWnkk..Gkdaeea 231
                 + +G++W+++  Gk+++  
  KHJ31046.1 153 YAEGVVWESHfsGKKFTGR 171
                 6778888754224333322 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00026
                 ....SSC--XXXXXXX.....XXXXXXXX.....X CS
       CAP_N 231 alkaaaaaasaaaaggppp.PpPpPppasvfeees 264
                 +++++++++++  + ++pp PpPpPpp++++++++
  KHJ31046.1 274 ITQSSQPPPRNLRQRESPPsPPPPPPPPPPQSHSE 308
                 33444455555554443332444444443333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (582 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 4310.34
//
Query:       KHJ31047.1  [L=458]
Description: putative pci domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-11   44.3   0.3    4.7e-10   39.9   0.0    2.6  3  PCI       PCI domain


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0     0.026   4.6e+02       6      56 ..      39      86 ..      37      98 .. 0.80
   2 ?   -3.9   0.2         1   1.8e+04      49      64 ..     214     229 ..     212     234 .. 0.69
   3 !   39.9   0.0   2.6e-14   4.7e-10       3     104 ..     327     448 ..     326     449 .. 0.95

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.026
                HHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH CS
         PCI  6 llkalrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvsk 56
                l ++++s n++ +++  +++   l+ +++l   +++ e  ++  ++++++k
  KHJ31047.1 39 LRQIYQSTNFQNVEQDIRKH---LMVEKNLGVRIQKEEADAWVAVYQTYWK 86
                66788999999999999999...8888888888888888888888888777 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 1
                 HHHHHHHHCESEEEHH CS
         PCI  49 rllrqvskiyssisle 64 
                 +ll +++++ +si+l+
  KHJ31047.1 214 NLLFKTYFKLNSITLS 229
                 4445677778888887 PP

  == domain 3  score: 39.9 bits;  conditional E-value: 2.6e-14
                 HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH...............CESEEEHHHHHHHHTSSH......HHHHHH CS
         PCI   3 ysdllkalrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvsk...............iyssislerlaklldlsv......devEki 80 
                 +  l +++++g+lsgf+ +l    e+ + ++ ++  le+ ++ + ++llr+v+                  ++i+++++  ++ l +      devE++
  KHJ31047.1 327 FLPLCRCIKRGELSGFDNALILG-ENNFTKRRIYLTLERGRDIALRNLLRKVFIaggfenskdpsqpptRRTRIPVSEFGAAISLGSreslenDEVECL 424
                 567999***********998777.778999*************************************9999**************************** PP

                 HHHHHHTTSSSEEEETTTTEEEEC CS
         PCI  81 lvklIrdgeirakidqesgivvfk 104
                 ++++I++++++++i++e givv++
  KHJ31047.1 425 IANMIYKNLMKGYISRERGIVVLS 448
                 **********************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3316.02
//
Query:       KHJ31048.1  [L=102]
Description: putative hit finger domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.07   13.2   0.0      0.091   12.8   0.0    1.2  1  RhoGEF67_u2  Unstructured region two on RhoGEF 6 and 7


Domain annotation for each model (and alignments):
>> RhoGEF67_u2  Unstructured region two on RhoGEF 6 and 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   5.1e-06     0.091      44      91 ..      21      65 ..      11      71 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 5.1e-06
  RhoGEF67_u2 44 syilkdsskspktvkkflpkrkterkpsdeefalrkstaaleedaqil 91
                 +y+l ++s+sp    + +  rk+ rkp+ + ++ rkst+ l  d +il
   KHJ31048.1 21 AYVLDNASQSPLVATQPI-SRKRARKPTLDIVNPRKSTVQL--DIKIL 65
                 79*********8777655.68999***************98..45555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       324  (0.0180713); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.27s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 738.68
//
Query:       KHJ31049.1  [L=330]
Description: putative golgi reassembly stacking protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-46  158.1   0.0    2.6e-44  150.9   0.0    2.1  2  GRASP55_65  GRASP55/65 PDZ-like domain
     0.0047   16.7   0.0       0.45   10.4   0.0    2.3  2  PDZ_6       PDZ domain
  ------ inclusion threshold ------
       0.16   12.4   0.0        4.8    7.6   0.0    2.3  2  PDZ         PDZ domain


Domain annotation for each model (and alignments):
>> GRASP55_65  GRASP55/65 PDZ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0     2e-05      0.12      61     112 ..      40      93 ..      33      97 .. 0.90
   2 !  150.9   0.0   4.3e-48   2.6e-44       1     137 [.      77     209 ..      77     210 .. 0.96

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2e-05
                 --TTTEEEEEEE.SSSS..STSCSHHHHTTTSSS-EEEEEEETTTTEEEEEEE- CS
  GRASP55_65  61 LvpksDYiiGldkgllk..geedlselveaheekelkLlvYnsesdevrevtvk 112
                 + p+ D+i+G++  ++   +++ +++ +++ + ++++L ++ ++ + vr + + 
  KHJ31049.1  40 IEPWFDFIVGINGRMIDnsDSSLFIQEIRNCAGSSVTLGLWSAKGQRVRTIQIP 93 
                 67999********9999778889***************************9994 PP

  == domain 2  score: 150.9 bits;  conditional E-value: 4.3e-48
                 EEEEETTT--EEEEEE---SSSSSSSSSSEEEEEEE-TTTTTS-EEEEEEBTTSHHHHHT--TTTEEEEEEE.SSSSSTSCSHHHHTTTSSS-EEEEEE CS
  GRASP55_65   1 levysaksqklrevslvpskewggqgllGlslrlaslekaaeevwhvldvlegsPaakagLvpksDYiiGldkgllkgeedlselveaheekelkLlvY 99 
                 l ++sak+q++r++++  sk+      lGl++++ s++ +a+++wh+ldv  +sPa+ agL+p+sDYiiG ++g+l ge+ l elve++  ++l+L++Y
  KHJ31049.1  77 LGLWSAKGQRVRTIQIPISKT---DPSLGLTIQWMSIN-VASNIWHILDVPANSPADIAGLLPYSDYIIGSPDGVLLGENGLGELVESYIRRPLRLYIY 171
                 568*************55555...599***********.9*********************************************************** PP

                 ETTTTEEEEEEE---TTSSSSTTTSEEEE-SGGGS--- CS
  GRASP55_65 100 nsesdevrevtvkpsrewGgegalGcdvgyGlLhriPe 137
                 n+e d++re+t++psr+wGgegalGc +g+G+Lhr+P+
  KHJ31049.1 172 NNEFDVTREITINPSRDWGGEGALGCVLGFGALHRLPA 209
                 *************************************7 PP

>> PDZ_6  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   7.5e-05      0.45      20      53 ..      45      78 ..      45      81 .. 0.95
   2 !    4.1   0.0    0.0069        41       5      18 ..     122     135 ..     118     141 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 7.5e-05
       PDZ_6 20 DiilsvNGqpveglsladvaallrgsagesvvlv 53
                D i+ +NG+ ++  +   +++ +r+ ag+sv+l 
  KHJ31049.1 45 DFIVGINGRMIDNSDSSLFIQEIRNCAGSSVTLG 78
                89******************************96 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.0069
       PDZ_6   5 VdpgsPAdrAGlrv 18 
                 V ++sPAd AGl +
  KHJ31049.1 122 VPANSPADIAGLLP 135
                 6689*******865 PP

>> PDZ  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0008       4.8      48      81 ..      45      79 ..      45      80 .. 0.91
   2 ?    2.3   0.0     0.037   2.2e+02       7      51 ..      95     141 ..      89     142 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0008
                EEEEEETTEETTTSHHHHHHHHHHTTTS.EEEEEE CS
         PDZ 48 DkIlsvNgvdvenvsheeavqaikgskg.kvtLti 81
                D I+++Ng+ + n      +q+i+++ g +vtL +
  KHJ31049.1 45 DFIVGINGRMIDNSDSSLFIQEIRNCAGsSVTLGL 79
                77************99999999*999999999976 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.037
                 S.TTSESSEEEEEETTSSSSSSEEEEEECTTSHHHHHT.SSTTEEEE CS
         PDZ   7 e.grgglGfslkggsdqrgdkgifvsevlpggaaeadg.lkvGDkIl 51 
                 + +  +lG++++ +s + +++  ++ +v ++++a+ +g l   D I+
  KHJ31049.1  95 SkTDPSLGLTIQWMSINVASNIWHILDVPANSPADIAGlLPYSDYII 141
                 337789999999999999999999***********999888888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2395.80
//
Query:       KHJ31050.1  [L=251]
Description: putative pyroglutamyl peptidase type [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.9e-15   57.0   0.0    3.4e-09   37.2   0.0    2.7  2  Peptidase_C15  Pyroglutamyl peptidase
  ------ inclusion threshold ------
       0.14   11.9   0.0       0.26   11.0   0.0    1.5  1  PgaPase_1      Putative pyroglutamyl peptidase PgaPase_1
       0.14   12.2   0.1        3.6    7.6   0.1    2.9  2  Nudix_hydro    Nudix hydrolase domain


Domain annotation for each model (and alignments):
>> Peptidase_C15  Pyroglutamyl peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   9.6e-07    0.0058       2      29 ..      14      42 ..      13      52 .. 0.82
   2 !   37.2   0.0   5.7e-13   3.4e-09      37     168 ..      73     214 ..      45     235 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 9.6e-07
                   EEEEEEE---.TT-S--HHHHHHHHHTT- CS
  Peptidase_C15  2 kvLvtGfdPf.gkekinPaleavkeLdga 29
                    vL+tGf+Pf ++ ++n ++e++++L+ +
     KHJ31050.1 14 SVLITGFAPFyENSSVNSSWEIARKLPSH 42
                   59*******746789***********955 PP

  == domain 2  score: 37.2 bits;  conditional E-value: 5.7e-13
                    EEEEE-SSTTHHHHHHHHHHHHH--SEEEEEEE-TT--SEEEE-EEES......-BE-.SS--TTS---ESB-.SSTTS-SEEE--S-HHHHHHHH CS
  Peptidase_C15  37 vkrevPtvfkksadvlkkaiaeikpdivlaiGqagGrsaitvervain......ldDa.ripDnegkqlidep.ispdgeaaYfstlPvkamvkal 124
                      + + + +k++ + + k  ++ k d +++iG a+ r+  ++er a          D+   pD  ++   +++ i  + +    s++ v    ++ 
     KHJ31050.1  73 YPEPIKVAYKTVRELVPKLWDSRKIDFMIHIGMAANRNYYSIERRAHRdgylmlDVDCmACPDLTERTAQGKNwIWYGLPEEILSEIHVYDTCNRW 168
                    23456678889999999999************************9964222211234434677666666554425556667777777787777766 PP

                    H..HTT--EEEES---SSHHHHHHHHHHHHHHHHS--SEEEEEEE- CS
  Peptidase_C15 125 k..eaGvPaavsntaGtfvCnhllYqvlylldkklpevraGfihiP 168
                    +    G+   +s+ aG ++C+++ Y +l  l k++++++  f+h+P
     KHJ31050.1 169 RalTSGIDVRISEDAGRYLCDFIYYSSLAELTKRGQPKKVIFLHVP 214
                    63358****************************************9 PP

>> PgaPase_1  Putative pyroglutamyl peptidase PgaPase_1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   4.3e-05      0.26      63     112 ..      77     127 ..      46     137 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.3e-05
   PgaPase_1  63 meesYdkvdqvvdelvei.eskvaihlsshslkntieivkkafsngYtqkD 112
                 ++ +Y+ v + v +l +  ++ + ih+   + +n   i+++a+ +gY   D
  KHJ31050.1  77 IKVAYKTVRELVPKLWDSrKIDFMIHIGMAANRNYYSIERRAHRDGYLMLD 127
                 5678***********9752789*************************8766 PP

>> Nudix_hydro  Nudix hydrolase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.13     8e+02      33      53 ..     136     156 ..     134     164 .. 0.81
   2 ?    7.6   0.1    0.0006       3.6      53      72 ..     230     249 ..     193     250 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.13
  Nudix_hydro  33 lsqwreegkrgvwlkvpieqs 53 
                  l++ +++gk+ +w  +p e  
   KHJ31050.1 136 LTERTAQGKNWIWYGLPEEIL 156
                  678899*******99998755 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0006
  Nudix_hydro  53 selvpiavkeGFefHhaekd 72 
                   +l++++v+ +F+fH a++d
   KHJ31050.1 230 IQLIKAIVQSEFKFHKASSD 249
                  5899*************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1879.04
//
Query:       KHJ31051.1  [L=84]
Description: putative splicing factor 3b subunit 10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.3e-37  125.0   0.0      1e-36  124.9   0.0    1.0  1  SF3b10    Splicing factor 3B subunit 10 (SF3b10)


Domain annotation for each model (and alignments):
>> SF3b10  Splicing factor 3B subunit 10 (SF3b10)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.9   0.0   5.7e-41     1e-36       1      78 []       3      80 ..       3      80 .. 0.99

  Alignments for each domain:
  == domain 1  score: 124.9 bits;  conditional E-value: 5.7e-41
                XXXXXXXXXXXXXXXXXXXXXXXX--HHHHHHHHHHHHHHHHH-HHHHHHHHHHHT--HHHHHHHHHHCTSSTT---- CS
      SF3b10  1 DklreqqqlehlkskYvGtGhadttkeEWltnihRDtyaSlvgHsalleYfaiaeneskarvrlellekmlqpcgppp 78
                Dklr+qqqle+l+++YvGtGhadttk+EW++ni+RD++aS++gH++ll+Y+ai+ + s+++vr +l+e+m+qp+g+pp
  KHJ31051.1  3 DKLRAQQQLEALQARYVGTGHADTTKFEWTSNIQRDSCASYIGHPPLLTYMAIGLGVSREKVRAQLIERMIQPVGKPP 80
                9***************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       292  (0.0162865); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.21s 00:00:00.55 Elapsed: 00:00:00.36
# Mc/sec: 704.26
//
Query:       KHJ31052.1  [L=699]
Description: putative kelch repeats protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-25   87.8   0.2    3.8e-25   87.8   0.2    3.1  3  DUF4110   Domain of unknown function (DUF4110)
    9.6e-25   86.3  16.9    3.2e-09   36.7   0.1    6.2  6  Kelch_4   Galactose oxidase, central domain
    1.1e-24   86.2  12.6    3.5e-10   39.9   0.1    5.8  6  Kelch_3   Galactose oxidase, central domain
    1.6e-17   63.0   6.3    1.9e-07   30.9   0.1    5.8  6  Kelch_5   Kelch motif
    9.3e-15   54.0   0.8    0.00019   20.9   0.1    4.6  4  Kelch_1   Kelch motif
      3e-12   46.0   5.8    0.00015   21.6   0.0    6.0  6  Kelch_2   Kelch motif
    1.9e-11   43.8   7.5    0.00033   20.8   0.1    5.5  6  Kelch_6   Kelch motif


Domain annotation for each model (and alignments):
>> DUF4110  Domain of unknown function (DUF4110)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   2.1         1   2.7e+03      35      68 ..      20      59 ..      12      75 .. 0.59
   2 ?   -2.3   0.7       1.9     5e+03      24      83 ..     509     533 ..     501     545 .. 0.46
   3 !   87.8   0.2   1.5e-28   3.8e-25       5      94 ..     604     692 ..     601     693 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1
     DUF4110 35 lkekgaek......kseKelkkeafelAeerywelrpvLe 68
                ++++++++       ++K+l  ++ ++Ae+   +l+ vL 
  KHJ31052.1 20 KQKQEKKSglkkekTKKKHLNYDSDAAAEDDNLDLEAVLA 59
                3333333334446577778888888888777666665554 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.9
     DUF4110  24 seeWqelaieslkekgaekkseKelkkeafelAeerywelrpvLeelraledeqeeagig 83 
                 +e+W    ie                                   +    ede ++ + +
  KHJ31052.1 509 TENWEGSDIE-----------------------------------QSDLEEDEDDDIESK 533
                 4444433333...................................333333333333333 PP

  == domain 3  score: 87.8 bits;  conditional E-value: 1.5e-28
     DUF4110   5 dslptPrpgEslrdFfaRTseeWqelaieslkekgaek..kseKelkkeafelAeerywelrpvLeelraledeqeeagigevvekakkkek 94 
                 + +p Prp+Es + Ff+RT++eWqel++++l++kg      ++Ke+k++afel+e+ +we+r   ee+  ledeq +agigevv+ +kk+++
  KHJ31052.1 604 SDNPYPRPFESRKSFFERTGNEWQELLMTNLRWKGILPetLTVKEIKTKAFELSENYWWECR---EEIIMLEDEQLAAGIGEVVTLDKKETT 692
                 5789******************************987789**********************...**********************99865 PP

>> Kelch_4  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.1   1.2e-12   3.2e-09       1      48 [.      81     135 ..      81     136 .. 0.88
   2 !   23.7   0.1   1.3e-08   3.4e-05       1      47 [.     137     190 ..     137     191 .. 0.85
   3 !   17.3   0.2   1.3e-06    0.0034       1      37 [.     192     230 ..     192     237 .. 0.90
   4 ?   -3.3   0.0       3.8   9.8e+03       3      21 ..     250     267 ..     248     268 .. 0.62
   5 ?    4.6   0.3     0.013        33       2      40 ..     334     379 ..     333     386 .. 0.75
   6 !   11.6   0.2   8.4e-05      0.21       9      36 ..     466     495 ..     459     499 .. 0.84

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 1.2e-12
     Kelch_4   1 pRaghsatsipd..gtiylfGGrgedg...tllndlylldlstntWrrl..gslP 48 
                 pR ++s+++ p   ++++lfGG++ +g   t++ndly++ +   +Wr +  +++P
  KHJ31052.1  81 PRSSTSFIASPTnsNELFLFGGEYFNGaiaTFYNDLYVYLINKDEWRSItsPNSP 135
                 788899888855448**********************************666666 PP

  == domain 2  score: 23.7 bits;  conditional E-value: 1.3e-08
     Kelch_4   1 pRaghsatsipd.gtiylfGGrgedg..tllndlylldlstntWrrl....gsl 47 
                 pR gh+ +  ++  +i+lfGG+ +    +++ + + ld st++W+rl    +++
  KHJ31052.1 137 PRSGHAWCRGGNqRSIFLFGGEFSSPkqGTFYHFWQLDPSTREWTRLevkgKPP 190
                 89999999998768*********96478*******************8874333 PP

  == domain 3  score: 17.3 bits;  conditional E-value: 1.3e-06
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedg...tllndlylldls 37 
                 +R gh +t+  +++i+lfGG ++     + l+dl+++d+ 
  KHJ31052.1 192 ARSGHRMTYY-KNYIILFGGFQDTSqntKYLADLWIYDTL 230
                 7999999999.7***********889************75 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 3.8
     Kelch_4   3 aghsatsipdgtiylfGGr 21 
                  ++s+        +l+GG+
  KHJ31052.1 250 SSFSFLPHE-KGAVLYGGY 267
                 555555553.567889998 PP

  == domain 5  score: 4.6 bits;  conditional E-value: 0.013
     Kelch_4   2 RaghsatsipdgtiylfGG.....rgedg...tllndlylldlstnt 40 
                 Rag+++t+    + +lfGG     ++e+g   +++n l++++++ n+
  KHJ31052.1 334 RAGATMTYHKC-RGILFGGvhdveESEEGidsEFFNGLFAWNIERNR 379
                 999******65.7777**95555444445888888888888888886 PP

  == domain 6  score: 11.6 bits;  conditional E-value: 8.4e-05
     Kelch_4   9 sipdgtiylfGGrgedg...tllndlylldl 36 
                 +  ++ +y++GG  e+g    +++d+y++dl
  KHJ31052.1 466 VQ-GDCLYVYGGTFEKGdreFTFDDMYAIDL 495
                 44.5789*********************998 PP

>> Kelch_3  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9   0.1   1.4e-13   3.5e-10       2      47 ..      95     144 ..      94     146 .. 0.94
   2 !   25.2   0.0   5.7e-09   1.5e-05       3      49 .]     151     201 ..     150     201 .. 0.86
   3 !   15.2   0.0   7.5e-06     0.019       2      45 ..     203     253 ..     202     255 .. 0.84
   4 ?   -3.0   0.1       3.8   9.8e+03       4      12 ..     261     269 ..     261     281 .. 0.78
   5 ?    0.1   0.1       0.4     1e+03      37      49 .]     330     342 ..     305     342 .. 0.73
   6 !    9.5   0.1   0.00046       1.2       1      29 [.     468     498 ..     468     521 .. 0.77

  Alignments for each domain:
  == domain 1  score: 39.9 bits;  conditional E-value: 1.4e-13
     Kelch_3   2 drlyifGGlgddg..qdrlndvyvydldtntWaei..aslppaRaghaat 47 
                 ++l++fGG+ ++g   +++nd+yvy +++++W++i  +++p +R+gha +
  KHJ31052.1  95 NELFLFGGEYFNGaiATFYNDLYVYLINKDEWRSItsPNSPLPRSGHAWC 144
                 78*********99899999**************9988***********99 PP

  == domain 2  score: 25.2 bits;  conditional E-value: 5.7e-09
     Kelch_3   3 rlyifGGlgddgqdrlndvy...vydldtntWaei...aslppaRaghaatai 49 
                 ++++fGG+   + +  +++y    +d++t +W+++   + +ppaR+gh +t++
  KHJ31052.1 151 SIFLFGGEF--SSPKQGTFYhfwQLDPSTREWTRLevkGKPPPARSGHRMTYY 201
                 589******..88888888733366********9999**************96 PP

  == domain 3  score: 15.2 bits;  conditional E-value: 7.5e-06
     Kelch_3   2 drlyifGGlgd..dgqdrlndvyvydldtntWaei...asl..ppaRagha 45 
                 +++ +fGG+ d  +++++l d++ yd+ t  W +    +s+  p aR++++
  KHJ31052.1 203 NYIILFGGFQDtsQNTKYLADLWIYDTLTYAWFSPdlpSSMqkPDARSSFS 253
                 99*********98889999**************666753334488999987 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 3.8
     Kelch_3   4 lyifGGlgd 12 
                 ++++GG+ +
  KHJ31052.1 261 AVLYGGYSR 269
                 589***984 PP

  == domain 5  score: 0.1 bits;  conditional E-value: 0.4
     Kelch_3  37 lppaRaghaatai 49 
                 + p Rag+++t++
  KHJ31052.1 330 PKPSRAGATMTYH 342
                 4579*******85 PP

  == domain 6  score: 9.5 bits;  conditional E-value: 0.00046
     Kelch_3   1 gdrlyifGGlgd..dgqdrlndvyvydldtn 29 
                 gd+ly++GG     d++    d+y++dl++ 
  KHJ31052.1 468 GDCLYVYGGTFEkgDREFTFDDMYAIDLGKL 498
                 799********977777777********764 PP

>> Kelch_5  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   0.00025      0.65       2      39 ..      79     121 ..      78     124 .. 0.76
   2 !   10.8   0.0   0.00015      0.38       2      40 ..     135     176 ..     134     178 .. 0.83
   3 !   30.9   0.1   7.5e-11   1.9e-07       2      39 ..     190     229 ..     189     231 .. 0.94
   4 ?    0.7   0.0      0.22   5.6e+02       3      28 ..     247     270 ..     246     275 .. 0.67
   5 ?   -2.2   0.0       1.7   4.3e+03      18      24 ..     347     353 ..     332     375 .. 0.69
   6 !    8.4   0.0   0.00083       2.1       2      35 ..     456     491 ..     455     495 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00025
     Kelch_5   2 PppRaghcavtv...sekiYvyGGkvgrdgsv..sddvyvLdl 39 
                 P pR++ ++++    s++++++GG   ++ ++  ++d+yv+ +
  KHJ31052.1  79 PKPRSSTSFIASptnSNELFLFGGEYFNGAIAtfYNDLYVYLI 121
                 789999999988555799******77633333448*****965 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00015
     Kelch_5   2 PppRaghcav..tvsekiYvyGGkvg.rdgsvsddvyvLdlp 40 
                 P pR+gh+ +  +   +i+++GG  + + ++ + ++++Ld+ 
  KHJ31052.1 135 PLPRSGHAWCrgGNQRSIFLFGGEFSsPKQGTFYHFWQLDPS 176
                 78888888884333477*********9*************86 PP

  == domain 3  score: 30.9 bits;  conditional E-value: 7.5e-11
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvg..rdgsvsddvyvLdl 39 
                 Pp+R+gh + +++++i+++GG++   ++ ++  d++++d+
  KHJ31052.1 190 PPARSGHRMTYYKNYIILFGGFQDtsQNTKYLADLWIYDT 229
                 9**********************668************96 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.22
     Kelch_5   3 ppRaghcavtvsekiYvyGGkvgrdg 28 
                  +R+++++  ++    +yGG++  + 
  KHJ31052.1 247 DARSSFSFLPHEKGAVLYGGYS--RV 270
                 55666666555666889****9..55 PP

  == domain 5  score: -2.2 bits;  conditional E-value: 1.7
     Kelch_5  18 YvyGGkv 24 
                 +++GG+ 
  KHJ31052.1 347 ILFGGVH 353
                 5789987 PP

  == domain 6  score: 8.4 bits;  conditional E-value: 0.00083
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvg..rdgsvsddvy 35 
                 P  R+++   + ++ +YvyGG      ++  +dd+y
  KHJ31052.1 456 PHVRFNAQLTVQGDCLYVYGGTFEkgDREFTFDDMY 491
                 556999999************885557888888888 PP

>> Kelch_1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   3.9e-05       0.1       9      45 ..      92     132 ..      84     133 .. 0.89
   2 !    8.3   0.0   0.00068       1.7      14      42 ..     152     183 ..     149     184 .. 0.92
   3 !   20.9   0.1   7.4e-08   0.00019       1      39 [.     192     234 ..     192     235 .. 0.97
   4 !    7.5   0.0    0.0012       3.1       4      23 ..     461     484 ..     459     497 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.9e-05
                 EETTEEEEEEEBCS....SSBEEEEEEEETTTTEEEEECCC CS
     Kelch_1   9 vvggkiYviGGsdg....gnalssvevyDpetntWrelpsM 45 
                 +  ++++ +GG  +     ++ ++++vy   +++Wr ++s 
  KHJ31052.1  92 TNSNELFLFGGEYFngaiATFYNDLYVYLINKDEWRSITSP 132
                 56699********************************9986 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00068
                 EEEEEEBCS...SSBEEEEEEEETTTTEEEEE CS
     Kelch_1  14 iYviGGsdg...gnalssvevyDpetntWrel 42 
                 i+ +GG ++   +     ++ +Dp t +W++l
  KHJ31052.1 152 IFLFGGEFSspkQGTFYHFWQLDPSTREWTRL 183
                 89999999999999999*************87 PP

  == domain 3  score: 20.9 bits;  conditional E-value: 7.4e-08
                 BBBSEEEEEETTEEEEEEEBCS....SSBEEEEEEEETTTTEE CS
     Kelch_1   1 aragagavvvggkiYviGGsdg....gnalssvevyDpetntW 39 
                 ar+g+ +++  ++i  +GG+ +     ++l ++++yD+ t  W
  KHJ31052.1 192 ARSGHRMTYYKNYIILFGGFQDtsqnTKYLADLWIYDTLTYAW 234
                 69************************************99888 PP

  == domain 4  score: 7.5 bits;  conditional E-value: 0.0012
                 SEEEEEETTEEEEEEEBCS....S CS
     Kelch_1   4 gagavvvggkiYviGGsdg....g 23 
                 +a  +v g+++Yv GG ++     
  KHJ31052.1 461 NAQLTVQGDCLYVYGGTFEkgdrE 484
                 6667899*********99865544 PP

>> Kelch_2  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.089   2.3e+02      11      47 ..      94     131 ..      81     133 .. 0.73
   2 !   10.3   0.1   0.00022      0.56       1      49 []     137     187 ..     137     187 .. 0.88
   3 !   21.6   0.0     6e-08   0.00015       1      43 [.     192     235 ..     192     240 .. 0.96
   4 ?   -2.3   0.0         2   5.2e+03      15      29 ..     262     284 ..     249     292 .. 0.67
   5 ?    4.9   0.0     0.011        27       4      46 ..     336     384 ..     333     385 .. 0.84
   6 ?    4.6   0.0     0.013        33       7      31 ..     464     489 ..     458     498 .. 0.67

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.089
     Kelch_2  11 ggkiyvvGGa.htdnpnlsssdvhvldlekhvWeevtp 47 
                  + ++++GG  +++    + +d++v+  +k +W+  t 
  KHJ31052.1  94 SNELFLFGGEyFNGAIATFYNDLYVYLINKDEWRSITS 131
                 57788888886666666677899999999999998775 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00022
     Kelch_2   1 rrgghsssvp..ggkiyvvGGahtdnpnlsssdvhvldlekhvWeevtplg 49 
                 +r+gh+ + +  +  i+++GG +++ +   + +++ ld+++++W+++ ++g
  KHJ31052.1 137 PRSGHAWCRGgnQRSIFLFGGEFSSPKQGTFYHFWQLDPSTREWTRLEVKG 187
                 678888886656889*******999999999***************99876 PP

  == domain 3  score: 21.6 bits;  conditional E-value: 6e-08
     Kelch_2   1 rrgghsssvpggkiyvvGGa.htdnpnlsssdvhvldlekhvWe 43 
                 +r+gh +++  + i+++GG+ +t+ +  +  d++++d+ ++ W 
  KHJ31052.1 192 ARSGHRMTYYKNYIILFGGFqDTSQNTKYLADLWIYDTLTYAWF 235
                 699****************************************7 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 2
     Kelch_2  15 yvvGGa........htdnpnlss 29 
                 +++GG+        + +++++++
  KHJ31052.1 262 VLYGGYsrvkvtvnGKPGKGHVQ 284
                 58999966666666555555555 PP

  == domain 5  score: 4.9 bits;  conditional E-value: 0.011
     Kelch_2   4 ghsssvpggkiyvvGGa......htdnpnlsssdvhvldlekhvWeevt 46 
                 g ++++   + +++GG+      +++ ++++++ +  ++ e +++ ++t
  KHJ31052.1 336 GATMTYHKCRGILFGGVhdveesEEGIDSEFFNGLFAWNIERNRFFPLT 384
                 55555555555799*******************************9987 PP

  == domain 6  score: 4.6 bits;  conditional E-value: 0.013
     Kelch_2   7 ssvpggkiyvvGGa.htdnpnlsssd 31 
                  +v g+++yv+GG  + ++    ++d
  KHJ31052.1 464 LTVQGDCLYVYGGTfEKGDREFTFDD 489
                 67889********8555444444444 PP

>> Kelch_6  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.1   0.00022      0.57      11      49 ..      94     135 ..      81     138 .. 0.82
   2 !    7.8   0.0    0.0016       4.1      13      44 ..     151     184 ..     146     191 .. 0.84
   3 !   20.8   0.1   1.3e-07   0.00033       2      40 ..     193     234 ..     192     246 .. 0.92
   4 ?   -2.7   0.0       3.4   8.8e+03       2      21 ..     249     268 ..     248     272 .. 0.75
   5 ?   -0.2   0.0      0.53   1.4e+03      17      47 ..     349     388 ..     347     390 .. 0.80
   6 ?    3.6   0.0     0.036        91       5      24 ..     462     484 ..     458     501 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00022
     Kelch_6  11 ggkiYifGGytds...spylnkvwvydpetksWeqlpplpvp 49 
                  + +++fGG +      +++n+++vy +  + W+ +++++ p
  KHJ31052.1  94 SNELFLFGGEYFNgaiATFYNDLYVYLINKDEWRSITSPNSP 135
                 3579******87789*********************999876 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0016
     Kelch_6  13 kiYifGGytds..spylnkvwvydpetksWeqlp 44 
                 +i++fGG   s    ++  +w +dp+t+ W++l+
  KHJ31052.1 151 SIFLFGGEFSSpkQGTFYHFWQLDPSTREWTRLE 184
                 69999999988997777789***********985 PP

  == domain 3  score: 20.8 bits;  conditional E-value: 1.3e-07
     Kelch_6   2 raghslvsvggkiYifGGytds...spylnkvwvydpetksW 40 
                 r gh ++ + ++i +fGG  d    ++yl ++w+yd  t  W
  KHJ31052.1 193 RSGHRMTYYKNYIILFGGFQDTsqnTKYLADLWIYDTLTYAW 234
                 88999*******************************999777 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 3.4
     Kelch_6   2 raghslvsvggkiYifGGyt 21 
                 r ++s+  +    +++GGy+
  KHJ31052.1 249 RSSFSFLPHEKGAVLYGGYS 268
                 66677777778889999996 PP

  == domain 5  score: -0.2 bits;  conditional E-value: 0.53
     Kelch_6  17 fGGytds........spylnkvwvydpetksWeqlp.plp 47 
                 fGG  d         s+++n ++ +++e +++ +l+ ++p
  KHJ31052.1 349 FGGVHDVeeseegidSEFFNGLFAWNIERNRFFPLTlRMP 388
                 777777788888888999***********99977765555 PP

  == domain 6  score: 3.6 bits;  conditional E-value: 0.036
     Kelch_6   5 hslvsvggkiYifGGytds...s 24 
                  +l++ g+ +Y++GG       +
  KHJ31052.1 462 AQLTVQGDCLYVYGGTFEKgdrE 484
                 67888899*******86555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (699 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1354  (0.0755201); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.67u 0.26s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 4902.82
//
Query:       KHJ31053.1  [L=80]
Description: putative cytochrome c oxidase biogenesis protein cmc1-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-21   76.0   4.8    1.9e-21   75.8   4.8    1.0  1  Cmc1      Cytochrome c oxidase biogenesis protein Cmc1 like


Domain annotation for each model (and alignments):
>> Cmc1  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.8   4.8   1.1e-25   1.9e-21       1      68 [.       1      69 [.       1      70 [. 0.99

  Alignments for each domain:
  == domain 1  score: 75.8 bits;  conditional E-value: 1.1e-25
        Cmc1  1 mhkklkkkarkeCaelikalaeChkd.rllkvvgkCneekeamkkClkeyrtderlkdaekdriiekrl 68
                mh++l++k++ +C+el++al+eCh++ +l+kvvg+Cn+ k+a+++Cl+e+r+ +++ ++e ++i++k++
  KHJ31053.1  1 MHPHLHTKHNGACEELMNALDECHAKgFLWKVVGMCNDDKNALNRCLREQRNLRTKANREAAKIKNKKI 69
                9******************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1232  (0.0687155); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.26s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 622.80
//
Query:       KHJ31054.1  [L=152]
Description: putative dad family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-48  163.0   3.6    3.2e-48  162.6   3.6    1.2  1  DAD       DAD family
      0.005   16.7   0.6     0.0091   15.9   0.6    1.4  1  DUF4389   Domain of unknown function (DUF4389)
  ------ inclusion threshold ------
       0.13   11.4   0.0       0.17   11.0   0.0    1.1  1  Arb2      Arb2 domain


Domain annotation for each model (and alignments):
>> DAD  DAD family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.6   3.6   5.3e-52   3.2e-48       2     109 .]      45     152 .]      44     152 .] 0.98

  Alignments for each domain:
  == domain 1  score: 162.6 bits;  conditional E-value: 5.3e-52
                 HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHT--SSCHHHHHHHHHHHHHHHHHHHHHHHHH..S..--TT--TTHHHHHHHHHHHHH CS
         DAD   2 keilkellesYlkktpkrlkliDafllflvlvgvlqfvYcvlvgnfpfnaflsgfiatvgqfvLtvsLRlqlnaenkkefkeisperafadfvlasliL 100
                 ++i+  ++++Y++ tp+r++l+D+fl+flv+vgvlqf+Yc+++gn+pfnaflsgf+atvgqfvLt  LR+q+n +n++efk+isperafad+v++sliL
  KHJ31054.1  45 QQIVLGVWDNYQEVTPQRIRLVDVFLTFLVIVGVLQFIYCLIAGNYPFNAFLSGFSATVGQFVLTTILRIQTNDKNNTEFKNISPERAFADYVFGSLIL 143
                 688999********************************************************************************************* PP

                 HHHCCCH-X CS
         DAD 101 hfvvvnFig 109
                 hf++vnFi+
  KHJ31054.1 144 HFFCVNFIN 152
                 ********8 PP

>> DUF4389  Domain of unknown function (DUF4389)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.6   1.5e-06    0.0091      20      60 ..      68     110 ..      64     120 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.5e-06
     DUF4389  20 laslvlwvvvvvqflivLvtgrp..nepLrdfgksllrYiari 60 
                 +  + l++v v+qf++ L++g+   n+ L++f++ +++++  +
  KHJ31054.1  68 VFLTFLVIVGVLQFIYCLIAGNYpfNAFLSGFSATVGQFVLTT 110
                 6678999**************98456899*********97654 PP

>> Arb2  Arb2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   2.8e-05      0.17      92     158 ..       8      74 ..       5      83 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 2.8e-05
                 TT-EEEEEEE----.........--SSSS-HHHHHHHHHHHHHHHHHTTTTSSS.SEEEEEEECCHHHH CS
        Arb2  92 qkygviDvnipkliteeeeee..skeeeeeesaasesqelllylwdnyielfesaekifllGvGdaysg 158
                 +++ vi+    k+++++++++  s +++  ++++ + q+++l +wdny e++   ++i l+ v   ++ 
  KHJ31054.1   8 REHTVISTAASKSYSSKASSSkvSPKASPVSDQHLTLQQIVLGVWDNYQEVTP--QRIRLVDVFLTFLV 74 
                 5667777777777766666655444555556677799*************999..58877776655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       835  (0.0465726); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1193.50
//
Query:       KHJ31055.1  [L=786]
Description: putative serine threonine protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.9e-56  189.0   0.0    1.4e-55  188.5   0.0    1.2  1  Pkinase         Protein kinase domain
    1.2e-40  139.5   0.0      2e-40  138.7   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
    6.1e-06   25.3   0.0    1.1e-05   24.5   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase
  ------ inclusion threshold ------
      0.015   14.6   0.0      0.029   13.7   0.0    1.3  1  Kinase-like     Kinase-like
       0.12   12.0   0.0       0.23   11.1   0.0    1.5  1  FTA2            Kinetochore Sim4 complex subunit FTA2
       0.13   11.2   0.1        1.8    7.4   0.0    2.2  2  Haspin_kinase   Haspin like kinase domain
       0.14   12.1   0.0       0.27   11.1   0.0    1.4  1  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.5   0.0   5.6e-59   1.4e-55       3     264 .]      40     304 ..      38     304 .. 0.90

  Alignments for each domain:
  == domain 1  score: 188.5 bits;  conditional E-value: 5.6e-59
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH......HHHHHHHHHHHHHS...CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH.. CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkke......kkvlrEikilkklk...hpnivrlyevfeekdelylvleyveggeladlle.. 90 
                  +e +G+GsfG+Vyk+++ ++   vA+K+i+ +  + ++       ++vl+Ei+ l +l+    +ni  ++e++   ++++lv+ey++gg++a+l++  
  KHJ31055.1  40 LEELIGKGSFGRVYKGKDMRSAAVVAIKIIDIDASDTQDPrnadsySDVLKEIAALSTLSetkAKNINFVIEALVIGQSMWLVTEYCSGGSVATLMKpt 138
                 5789***************************99888887788999999*******9999888899********************************64 PP

                 HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHH CS
     Pkinase  91 rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvl.keneyskkvDvWslGvil 187
                     l+e+ +  i+++++e+l+y+H++giiHrD+K +N+Li e g ++++DFG+a  +e++ +  ++++gt++++APE+l ++ +y+k+vD+W+ G ++
  KHJ31055.1 139 FPAGLQEKWIIPILREVVEALRYVHAAGIIHRDIKCANVLITEVGGVQLCDFGIAGVIENKVDkRSTIIGTPHWMAPELLtGSASYGKEVDIWAFGSMV 237
                 3445********************************************************9988999*************89999************** PP

                 HHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 188 yelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 ye+ tg pp      +   ++ l         l ++++   e ++ s+e+ +l+  +l+++p++R+++ee+ +hpy+
  KHJ31055.1 238 YEIATGLPPNV---VNGIPYERLGS------YL-KQHVPRLEGDQYSSELCSLVAYCLEEEPQERPSIEEVQKHPYI 304
                 *********99...33322333333......33.224455566789*****************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.7   0.0   7.7e-44     2e-40       4     257 ..      41     300 ..      39     301 .. 0.88

  Alignments for each domain:
  == domain 1  score: 138.7 bits;  conditional E-value: 7.7e-44
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH.......HHHHHHHHHHHHTS...-BTTB--EEEEEESSSSEEEEEE--TTEBHHHH CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee.......keelleeakimkkl...khpnivkllgvctkeepllivteyvkgGdLlkf 91 
                  ++ +G+G+fG+V++g+      ++   Va+K+++ +a++++        +++l+e++ +++l   k +ni  ++ + + ++++++vtey++gG++ + 
   KHJ31055.1  41 EELIGKGSFGRVYKGKDM----RSAAVVAIKIIDIDASDTQdprnadsYSDVLKEIAALSTLsetKAKNINFVIEALVIGQSMWLVTEYCSGGSVATL 134
                  688************998....88999*****97544433322222336789999987776643367899999999999******************* PP

                  HHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHH CS
  Pkinase_Tyr  92 LrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDv 188
                  ++ +  + l+ k+++ +  +v ++++y+++  ++Hrd+ + NvL++e   v+++DfG+a  i  +++  k+++     +WmapE l+ +  + ++ D+
   KHJ31055.1 135 MKPTFPAGLQEKWIIPILREVVEALRYVHAAGIIHRDIKCANVLITEVGGVQLCDFGIAGVI--ENKVDKRSTIIGTPHWMAPELLTGSAsYGKEVDI 230
                  ****9*********************************************************..66667777788899********98766******* PP

                  HHHHHHHHHHHTTSSGT..TTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 189 WsfGvllwEiftlgesp..ypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  W+fG +++Ei+t g  p  ++g+  e++ ++lk++    + ++ ++el +l+  c+ee+p+eRp+++e+++
   KHJ31055.1 231 WAFGSMVYEIAT-GLPPnvVNGIPYERLGSYLKQHVPRLEGDQYSSELCSLVAYCLEEEPQERPSIEEVQK 300
                  ***********9.7766557899*********99988888899************************9976 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0   4.2e-09   1.1e-05     311     388 ..     151     220 ..     144     230 .. 0.86

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 4.2e-09
  Pkinase_fungal 311 alrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkg 388
                      lr++++++r  +  agi+HrDi   N+lit     +     L D+ +a  +++  + +++ + +GT+ +ma e+l g
      KHJ31055.1 151 ILREVVEALRYVH-AAGIIHRDIKCANVLIT-----EVGGVQLCDFGIAGVIEN--KVDKRSTIIGTPHWMAPELLTG 220
                     699**********.*****************.....456667*******99994..5666679***********9986 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.1e-05     0.029     153     246 ..     155     243 ..     143     252 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.1e-05
  Kinase-like 153 lirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvl.seve..kgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwcl 246
                  ++    + +a g++h +++  n+l  e gg+ l +f+      +kv   s++     +  pEll   +         +  ++d W+ G  +y i+  
   KHJ31055.1 155 VVEALRYVHAAGIIHRDIKCANVLITEVGGVQLCDFGIAGVIENKVDKrSTIIgtPHWMAPELLTGSAS--------YGKEVDIWAFGSMVYEIATG 243
                  566677899***************************976555555554355543433455666655344........55599**********99865 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   8.8e-05      0.23     144     212 ..     118     191 ..      82     193 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.8e-05
        FTA2 144 sralgeedgkkrpiraIVKelellkeqeelevsqlpkllrdlkklhklgIvvrDlkeenyi.....dgkLvDls 212
                 s +l +e+     +  + K+ + +  qe+ ++ +l+++++ l+ +h++gI++rD+k  n++     + +L+D++
  KHJ31055.1 118 SMWLVTEYCSGGSVATLMKPTFPAGLQEKWIIPILREVVEALRYVHAAGIIHRDIKCANVLitevgGVQLCDFG 191
                 56666666677777788888888889999***************************999864444344788887 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.065   1.7e+02     108     146 ..      34      99 ..      10     117 .. 0.71
   2 ?    7.4   0.0   0.00069       1.8     230     254 ..     169     193 ..     148     210 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.065
  Haspin_kinase 108 d..........seklssevyqtke..kdkevvlKvipl...............evledvtiskels 146
                    d          ++++++ vy+ k+  +   v++K+i +               +vl+++    +ls
     KHJ31055.1  34 DpppygleeliGKGSFGRVYKGKDmrSAAVVAIKIIDIdasdtqdprnadsysDVLKEIAALSTLS 99 
                    155566666678999*******99755566789*****8888888888888887777776655444 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.00069
  Haspin_kinase 230 HRdLhldniLvdknlnvtlidlkls 254
                    HRd++  n+L+ + + v l+d+ ++
     KHJ31055.1 169 HRDIKCANVLITEVGGVQLCDFGIA 193
                    **********************877 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0    0.0001      0.27     147     198 ..     150     195 ..      64     197 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.0001
                 HHHHHHHHHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EE CS
         APH 147 eleeqvlaalaallpgelptvllHgDlhpgNllvdpddgrvtGviDfedagl 198
                  + ++v +  ++ ++   +++++H+D++  N+l+++ +g    + Df+ ag+
  KHJ31055.1 150 PILREVVE-ALRYVH---AAGIIHRDIKCANVLITEVGGVQ--LCDFGIAGV 195
                 44443333.334555...8****************444444..888887775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (786 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       448  (0.0249875); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 5279.58
//
Query:       KHJ31056.1  [L=360]
Description: putative ubiquitin fusion degradation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.9e-73  243.3   0.0    1.3e-72  242.8   0.0    1.2  1  UFD1      Ubiquitin fusion degradation protein UFD1


Domain annotation for each model (and alignments):
>> UFD1  Ubiquitin fusion degradation protein UFD1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.8   0.0   7.4e-77   1.3e-72       1     173 []      32     209 ..      32     209 .. 0.99

  Alignments for each domain:
  == domain 1  score: 242.8 bits;  conditional E-value: 7.4e-77
        UFD1   1 feekyrcysvsm..kaereelekggkiiLPpsaLdeLtrlnieyPmlFelsnkkkkksthagVleFtaeegtvylPewmmenlgleegdlveiesvslp 97 
                 f+e+yrcy+v m  + ere+le ggki++PpsaL++Ltrlni+yPmlFel n +k+++th+gVleFtaeeg+ ylP+wmm++l l++gdlv+i+s++lp
  KHJ31056.1  32 FDEYYRCYPVVMfrGPEREDLEFGGKILMPPSALEKLTRLNITYPMLFELINGQKNRTTHCGVLEFTAEEGKLYLPHWMMQTLILDTGDLVQIKSTDLP 130
                 899*********9999*********************************************************************************** PP

        UFD1  98 kgkfvklqpqsedfldisdpkavLekaLrnfatLtkgdvieikyndkvyelkvlevkpes...avsiietdlevdfaeP 173
                 ++++vklqpqs +fldisdpkavLeka+rnfatLtkgd++++kynd++y+++ levkpe+   +vs++etd++vdfa+P
  KHJ31056.1 131 SASLVKLQPQSINFLDISDPKAVLEKAFRNFATLTKGDIFSFKYNDTIYSVEALEVKPETekmGVSMLETDVSVDFAPP 209
                 **********************************************************99999**************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       293  (0.0163422); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2607.73
//
Query:       KHJ31057.1  [L=515]
Description: putative triose-phosphate transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-57  193.9  12.1    4.4e-57  193.7  12.1    1.1  1  TPT       Triose-phosphate Transporter family
    9.3e-08   32.3  36.0    0.00031   20.9  14.4    3.5  2  EamA      EamA-like transporter family
    9.6e-07   28.3  12.5    1.6e-06   27.6  12.5    1.3  1  UAA       UAA transporter family


Domain annotation for each model (and alignments):
>> TPT  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.7  12.1   7.3e-61   4.4e-57       2     289 ..      83     405 ..      82     406 .. 0.91

  Alignments for each domain:
  == domain 1  score: 193.7 bits;  conditional E-value: 7.3e-61
         TPT   2 klgllfllWYllnvvfnilnKkilnvfpyPltvsavqllvgsvlil.vlwalglkk.........rpkisse...flkailplalvktlghvlavvsls 87 
                 kl++l+++WY+ + ++n   K iln+fp P+t++ +q++   ++++ ++w + l +         r  + ++   +l++ +pla +++ gh+l+  + +
  KHJ31057.1  83 KLVILCIIWYMSSALTNTSSKAILNAFPKPATLTILQFAFVACFCIfFSWLSSLSSifresipalRNGLRYPsqdVLVTTMPLAAFQIGGHLLSASATA 181
                 789***********************************99888865167999999999999999844444433359999******************** PP

         TPT  88 kvaVSfthtvKasePiFtvilsrlllgeklsllvylsLlpivgGvalasvtElsFnligfisAlisnltfslrnifsKkllkk..lkd........lda 176
                 k++VS  ht+K + P+Ftv+  r+++  +++++ ylsL+p+ +Gv+la       nl+g++ Al++ l+f+++nifsK+l+++    +        ld+
  KHJ31057.1 182 KIPVSLVHTIKGLSPLFTVLAYRFIFDIRYPMATYLSLIPLTVGVMLACSASFAGNLFGITNALLAALIFVTQNIFSKRLFNEaaVAEysgirsrkLDK 280
                 *********************************************************************************996522366788899*** PP

         TPT 177 lnlfaiitilslllllPvallvegvlktpsllkst............kvslkevllllllsgvlfhlynqvaymvLervspvthsvantvKrvvvIvls 263
                 lnl+++ + l++ll+ P+++  eg+    + ++ +            ++   ++ l+ l +g +++++n++a+ +L+ vspvt+sva+ +Krv++Iv++
  KHJ31057.1 281 LNLLFYSSGLAFLLTSPIWFWSEGLDLLRDFFHDGsldltagtlskpAFDHGRLALEFLFNGTFHFAQNIIAFVLLSLVSPVTYSVASLIKRVFIIVIA 379
                 ************************55555555555566777888864467899********************************************** PP

         TPT 264 vlvfknpvsllnaiGtavaivGvflY 289
                 ++ f+ p + ++a+G a++ +G +lY
  KHJ31057.1 380 IIWFRSPTTNVQALGIALTFFGLYLY 405
                 ************************** PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5  13.7     5e-06      0.03       4     134 ..      85     228 ..      82     231 .. 0.82
   2 !   20.9  14.4   5.1e-08   0.00031       2     134 ..     239     404 ..     238     405 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 5e-06
        EamA   4 illallaalfwaiyfvlskillrkv.spltltfvrfliagillliiallkegkl............aklslkdwlll.lllgllgtvlafllffyalkk 88 
                 ++l+++  +++a++ + sk++l+ +  p tlt ++f + + +++++++l+  +              +++ +d+l   + l+++ +  ++ll  +a  k
  KHJ31057.1  85 VILCIIWYMSSALTNTSSKAILNAFpKPATLTILQFAFVACFCIFFSWLSSLSSifresipalrngLRYPSQDVLVTtMPLAAFQI-GGHLLSASATAK 182
                 7999*******************995677999999999999999995555544444443344555546666666666477777665.578********* PP

        EamA  89 tsasnaslitslePvftlilsvlllgekltlkqllgivlillGvll 134
                 +++s +  i  l+P+ft++   +++  +    ++l+++   +Gv+l
  KHJ31057.1 183 IPVSLVHTIKGLSPLFTVLAYRFIFDIRYPMATYLSLIPLTVGVML 228
                 ********************************************98 PP

  == domain 2  score: 20.9 bits;  conditional E-value: 5.1e-08
        EamA   2 lgillallaalfwaiyfvlskillrkv.............spltltfvrfliagilllii..................allkegkl..aklslkdwlll 67 
                 +gi  allaal++ +  ++sk+l+++              + l l+f+++ +a++l ++i                  + l++g+l  + +++  ++l 
  KHJ31057.1 239 FGITNALLAALIFVTQNIFSKRLFNEAavaeysgirsrklDKLNLLFYSSGLAFLLTSPIwfwsegldllrdffhdgsLDLTAGTLskPAFDHGRLALE 337
                 79999******************8888888889999998899******************777777777776666666333333334446666666665 PP

        EamA  68 .lllgllgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvll 134
                  l+ g++ ++  +++ f +l+ +s+ + s+++++  vf++++++++++ + t  q lgi+l ++G++l
  KHJ31057.1 338 fLFNGTFHFA-QNIIAFVLLSLVSPVTYSVASLIKRVFIIVIAIIWFRSPTTNVQALGIALTFFGLYL 404
                 3566655555.4589999***********************************************998 PP

>> UAA  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6  12.5   2.7e-10   1.6e-06      21     299 ..     103     406 ..      79     409 .. 0.76

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 2.7e-10
         UAA  21 Elivkeepkafgnlltfvqflfvalegllesid......i...........lkkrkiPlktYvilvalffitsvlnnealkydisvPvhiifrssklip 102
                   i +  pk+  ++lt  qf+fva++ ++ s        +           + + +  l t + l+a+ ++ + l+ +a +  i+v +   ++  + + 
  KHJ31057.1 103 KAILNAFPKP--ATLTILQFAFVACFCIFFSWLsslssiFresipalrnglRYPSQDVLVTTMPLAAFQIGGHLLSASATAK-IPVSLVHTIKGLSPLF 198
                 3445555555..99**********988765544566565166677776676777777788888899999**********998.****99999******* PP

         UAA 103 vmilGililgkrYsllqylsvllltlGviiftllsakdkkedskeslnkfllGiallvlallldavlglvqeklykkyg.....khsk.ealfyshlls 195
                 + ++  +i   rY +  yls++ lt+Gv+++     +++ + +    +++ll  ++ v   +++  l  ++e++  +y      k  k + lfys  l+
  KHJ31057.1 199 TVLAYRFIFDIRYPMATYLSLIPLTVGVMLACS---ASF-AGNLFGITNALLAALIFVTQNIFSKRL--FNEAAVAEYSgirsrKLDKlNLLFYSSGLA 291
                 *****************************9988...445.666777777777777777777777664..66666666641111134445899****999 PP

         UAA 196 lplfl..llqgellsavkflsesedval.........lslpsklfylllnvltqyvcikgV.lilisefgaltvtlvltlRKfvslllSillFknpltl 282
                 ++l+    +++e l+  +++++  ++ l         +   +  +  l+n  t ++ ++ + ++l s ++  t ++   + ++  +++ i++F+ p t 
  KHJ31057.1 292 FLLTSpiWFWSEGLDLLRDFFHDGSLDLtagtlskpaFDHGRLALEFLFNG-TFHFAQNIIaFVLLSLVSPVTYSVASLIKRVFIIVIAIIWFRSPTTN 389
                 999978899999999999999988888888887664434444444455555.5566666664899999999**************************** PP

         UAA 283 qhlvgtllVflglllys 299
                  + +g +l f+gl+ly 
  KHJ31057.1 390 VQALGIALTFFGLYLYD 406
                 ***************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 3757.33
//
Query:       KHJ31058.1  [L=570]
Description: putative splicing factor 3b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-60  201.0   1.3    5.9e-60  201.0   1.3    2.7  3  DUF382    Domain of unknown function (DUF382)
    1.3e-20   73.0   4.0    2.9e-20   71.9   4.0    1.6  1  PSP       PSP


Domain annotation for each model (and alignments):
>> DUF382  Domain of unknown function (DUF382)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.5   0.9         2   1.8e+04      76      86 ..     112     122 ..     104     129 .. 0.37
   2 !  201.0   1.3   6.6e-64   5.9e-60       1     127 []     136     262 ..     136     262 .. 0.99
   3 ?   -4.7   3.9         2   1.8e+04      38      82 ..     521     564 ..     516     569 .. 0.63

  Alignments for each domain:
  == domain 1  score: -4.5 bits;  conditional E-value: 2
      DUF382  76 eekslkekare 86 
                 e k  k+k++e
  KHJ31058.1 112 EVKLSKKKKKE 122
                 22222222222 PP

  == domain 2  score: 201.0 bits;  conditional E-value: 6.6e-64
      DUF382   1 kkPevvevaDvdakdPvllvklKssknvvpvpshWsskreylsgkrglekkpfelPkfikeTgieelrealeekeeekslkekarekvqpklgkldidy 99 
                 kkPe+ve++D++a+dP+llv++Ks++nvvpvp+hW  kreyls+krg+ek+pf+lPkfikeTgi+e+r+a+ ek++e +lk+k+re+vqpk+gkldidy
  KHJ31058.1 136 KKPELVEWTDTSASDPRLLVHIKSYRNVVPVPAHWALKREYLSSKRGVEKPPFSLPKFIKETGIAEMRDAVLEKQNEATLKQKQRERVQPKMGKLDIDY 234
                 58************************************************************************************************* PP

      DUF382 100 kkLhdaFfklqtkPkllkfGdlyyegke 127
                 +kL++aFf++qtkP+l+++G++yyegke
  KHJ31058.1 235 QKLYEAFFRFQTKPELTRYGEVYYEGKE 262
                 **************************97 PP

  == domain 3  score: -4.7 bits;  conditional E-value: 2
      DUF382  38 kreylsgkrglekkpfelPkfikeTgieelrealeekeeekslke 82 
                 +r+y ++kr  ek+++   + +++   +e r++ +++e+++  k+
  KHJ31058.1 521 RRRYEAQKR-EEKRSWAFDEDLSDMIAQESRKRQKRDEDKRIEKK 564
                 677877666.57888888888888777777775444444433333 PP

>> PSP  PSP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.9   4.0   3.2e-24   2.9e-20       1      46 []     271     316 ..     271     316 .. 0.98

  Alignments for each domain:
  == domain 1  score: 71.9 bits;  conditional E-value: 3.2e-24
         PSP   1 kPGviSaeLReALglqegqlPpWiykMqrlGlPPgYpklkipGlna 46 
                 +PG++S+eL+eAL++++g++PpW+++ qr+G+PP+Yp lkipGlna
  KHJ31058.1 271 RPGELSDELKEALNIPPGAPPPWLINQQRFGPPPSYPSLKIPGLNA 316
                 8*******************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (570 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1580  (0.0881254); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 4185.25
//
Query:       KHJ31059.1  [L=491]
Description: putative trimethyllysine dioxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-38  133.2   0.0    5.1e-37  128.1   0.0    2.0  2  TauD       Taurine catabolism dioxygenase TauD, TfdA family
    0.00024   21.7   0.0    0.00065   20.3   0.0    1.7  1  DUF971     Protein of unknown function (DUF971)
     0.0079   15.3   0.0       0.41    9.7   0.0    2.2  2  CsiD       CsiD
  ------ inclusion threshold ------
       0.27   11.3   1.4        1.1    9.4   1.4    2.1  1  Hormone_4  Neurohypophysial hormones, N-terminal Domain


Domain annotation for each model (and alignments):
>> TauD  Taurine catabolism dioxygenase TauD, TfdA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.2     0.019        87     153     198 ..      31      85 ..      14     102 .. 0.71
   2 !  128.1   0.0   1.1e-40   5.1e-37      27     268 .]     232     466 ..     207     466 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.019
        TauD 153 vrvyyhyrggglrteqelpavdkhprtghpvvrthp.........vltgrkallv 198
                  r+y+ +  + ++  +e+p   +h++ g ++ r+h          ++t+ + l  
  KHJ31059.1  31 SRNYHYQSSESEGINEEWPLAGEHYHIGGKLTRKHSlqdtsrvheNETRSYGLWG 85 
                 4555555558899***********************6655555553344444444 PP

  == domain 2  score: 128.1 bits;  conditional E-value: 1.1e-40
        TauD  27 keelrellaeygvvvfrgfplspeqqlefarrfGplygtpgrgtntkygevldvssvyesadianlayttllwHtDlsylesppgiqlLhcleapa.tG 124
                 +    +++++yg++ + + p+sp++++++++r+ + +++      t+yg+ +d++s+ + +d a+++ + ++ HtD +y+ +p+g+q++h l++   +G
  KHJ31059.1 232 VGKWTDMIRKYGFCYVDNCPISPKETKRLIERI-SFIRE------THYGGFYDFTSDLSMKDTAYTTIALQP-HTDTTYFTDPAGLQMFHLLTHENgSG 322
                 45556899************************9.44444......59******9999999999998888898.*********************556** PP

        TauD 125 GetpfvDgraaynaLpeelpellegltavrvyyhyrggglrteqelpavdkhprtghpvvrthp.....vltgrkallvnp......pfatrieglgtp 212
                 G++++vDg++a++ L+ e p++++ l+  +v+++++g        ++ ++ +p + +pv++  +     ++ + ++++ n+         + i     +
  KHJ31059.1 323 GASILVDGFKAAKILKLECPQKYKILCSKPVPARTVG--------NKGITVRPAKTFPVFNLKDlvlgeDEAELYQIRWNNddrgafTLEDTI-SGNVE 412
                 *************************************........999****************88765334444444442344444444455.5555* PP

        TauD 213 eskelldaleelledpeftyrfqwqeGdlvifdNrrvlHgrtafdegeeRhllrcy 268
                 + + + + ++++++  e +y++q+++G  +ifdN+r+lHgrtaf +g +R++ ++y
  KHJ31059.1 413 KWYTAARSFQSIINMSEMQYKTQLKPGRPLIFDNWRILHGRTAF-TG-KRRICGAY 466
                 ********************************************.9*.89888876 PP

>> DUF971  Protein of unknown function (DUF971)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.5e-07   0.00065      28      84 ..     125     184 ..     115     185 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.5e-07
      DUF971  28 Rdacpcaecr..kpgqrllqsgkipkdvkiesiepvgnyalrlvfsDg...hdsgiYsweyL 84 
                 Rd+c+c +c   ++ q+ ++  ++p+++ ++++    + +l++ +  g   h s  Y+w++ 
  KHJ31059.1 125 RDNCQCKKCInlDTLQKSFNIFSVPENIIPNEVV-TERGGLKVIWPEGddlHVS-FYPWNWI 184
                 9*********6544777788888*********99.7889******988776877.6****95 PP

>> CsiD  CsiD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.3   0.0     0.008        36     136     171 ..     293     328 ..     270     352 .. 0.85
   2 !    9.7   0.0   9.1e-05      0.41     247     281 ..     425     459 ..     413     464 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.008
                 -EEEE-S-TTSSS---EEEEEEEEEES--B--EEEE CS
        CsiD 136 klelhnDGtyveektdyvlmmkideenaegGeslll 171
                 +l+ h+D ty ++ +   +   +  en +gG s+l+
  KHJ31059.1 293 ALQPHTDTTYFTDPAGLQMFHLLTHENGSGGASILV 328
                 3455*****************************986 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 9.1e-05
                 HHT-TT-EEE---TT-EEEEETTTEEEEE--B--- CS
        CsiD 247 lenskkklevkvpvGslllinnlfwlhGrdkfeen 281
                 ++ s+ + ++++++G+ l+ +n   lhGr +f+ +
  KHJ31059.1 425 INMSEMQYKTQLKPGRPLIFDNWRILHGRTAFTGK 459
                 566888999***********************876 PP

>> Hormone_4  Neurohypophysial hormones, N-terminal Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.4   0.00024       1.1       1       8 [.     245     252 ..     245     252 .. 0.96

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00024
   Hormone_4   1 CYIqNCPr 8  
                 CY+ NCP+
  KHJ31059.1 245 CYVDNCPI 252
                 *******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3697.82
//
Query:       KHJ31060.1  [L=412]
Description: putative c2h2 type zinc finger containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.5e-20   70.6  59.3      0.025   15.4   0.0   10.3 10  zf-C2H2_4      C2H2-type zinc finger
    2.3e-17   62.4  69.2    0.00035   20.9   0.3   10.2  9  zf-C2H2        Zinc finger, C2H2 type
    1.4e-11   44.5  25.2    3.9e-05   23.9   0.6    5.0  5  zf-C2H2_8      C2H2-type zinc ribbon
    1.6e-11   44.1  53.1     0.0068   16.8   0.2    9.6  9  zf-H2C2_2      Zinc-finger double domain
    6.7e-07   29.9  33.4        1.4    9.6   0.3    8.2  9  FOXP-CC        FOXP coiled-coil domain
    6.7e-06   26.2  27.5       0.19   12.0   0.0    8.2  9  zf-C2H2_jaz    Zinc-finger double-stranded RNA-binding
    0.00015   22.1  25.2       0.19   12.2   0.1    6.9  6  zf-met         Zinc-finger of C2H2 type
    0.00057   19.6   0.1     0.0028   17.4   0.1    2.2  1  DUF4187        Domain of unknown function (DUF4187)
    0.00086   19.0  30.6     0.0082   15.8   1.3    7.7  8  zf_Hakai       C2H2 Hakai zinc finger domain
     0.0035   18.0  30.2       0.19   12.4   0.1    5.8  5  zf-C2H2_3rep   Zinc finger C2H2-type, 3 repeats
     0.0086   16.2  17.1      0.028   14.5   0.1    6.6  7  zf_ZIC         Zic proteins zinc finger domain
  ------ inclusion threshold ------
      0.026   14.7  30.7       0.37   10.9   0.4    5.8  7  zf-C2H2_aberr  Aberrant zinc-finger
      0.065   13.3   0.5      0.065   13.3   0.5    5.7  7  zf-C2H2_6      C2H2-type zinc finger
        5.4    6.7  14.5        2.4    7.8   1.0    4.6  4  zf-C2H2_12     Zinc-finger C2H2-type


Domain annotation for each model (and alignments):
>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.2     4e-05     0.051       2      23 ..      81     104 ..      80     105 .. 0.95
   2 !   11.4   2.6   0.00036      0.47       1      24 []     110     135 ..     110     135 .. 0.97
   3 !   11.6   2.2   0.00032      0.41       1      23 [.     141     165 ..     141     166 .. 0.93
   4 !   11.2   2.1   0.00042      0.54       1      24 []     171     197 ..     171     197 .. 0.89
   5 !    8.4   0.1    0.0033       4.3       5      24 .]     215     234 ..     211     234 .. 0.91
   6 ?   -0.7   0.9       2.8   3.6e+03       1      12 [.     239     252 ..     239     257 .. 0.74
   7 ?    6.3   0.1     0.017        21       9      24 .]     260     275 ..     258     275 .. 0.91
   8 !   11.7   0.3   0.00029      0.38       2      24 .]     277     299 ..     277     299 .. 0.92
   9 !   15.4   1.3     2e-05     0.026       1      24 []     310     335 ..     310     335 .. 0.91
  10 !   15.4   0.0     2e-05     0.025       6      24 .]     362     380 ..     360     380 .. 0.96

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 4e-05
   zf-C2H2_4   2 kCpi..CgksFsskkaLlrHlkth 23 
                 kC++  C+k+F+++ +L  Hl++h
  KHJ31060.1  81 KCTYdnCDKTFNRPAKLAAHLRSH 104
                 89*********************9 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00036
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkthH 24 
                 f+C++  C+k +   k+L++H+k+ H
  KHJ31060.1 110 FICTYtgCDKAYLQLKHLQHHIKSSH 135
                 89*********************998 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 0.00032
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkth 23 
                 f C++  Cgk F ++++L+rH k h
  KHJ31060.1 141 FHCEWegCGKAFLTSTRLKRHHKVH 165
                 7899999**************9988 PP

  == domain 4  score: 11.2 bits;  conditional E-value: 0.00042
   zf-C2H2_4   1 fkCpi...CgksFsskkaLlrHlkthH 24 
                 fkC+    C+++F+ +++L+rH+++ H
  KHJ31060.1 171 FKCTNyppCSQNFRKHQTLQRHIRSEH 197
                 67888888*****99999******999 PP

  == domain 5  score: 8.4 bits;  conditional E-value: 0.0033
   zf-C2H2_4   5 iCgksFsskkaLlrHlkthH 24 
                  C+  F s+ +L+rH ++ H
  KHJ31060.1 215 SCNSGFDSSASLRRHQERAH 234
                 6**************99987 PP

  == domain 6  score: -0.7 bits;  conditional E-value: 2.8
   zf-C2H2_4   1 fkCpiC..gksFss 12 
                 + C  C  ++sF+s
  KHJ31060.1 239 YFCNECclTGSFNS 252
                 67999867777765 PP

  == domain 7  score: 6.3 bits;  conditional E-value: 0.017
   zf-C2H2_4   9 sFsskkaLlrHlkthH 24 
                  F+s+++L+ H+++ H
  KHJ31060.1 260 GFTSYSKLQAHIRKEH 275
                 599***********99 PP

  == domain 8  score: 11.7 bits;  conditional E-value: 0.00029
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlkthH 24 
                 +C +C+  F+s ++Ll+H+ + H
  KHJ31060.1 277 ECMFCNIKFRSERELLSHVDSIH 299
                 5*****************98877 PP

  == domain 9  score: 15.4 bits;  conditional E-value: 2e-05
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkthH 24 
                 f+C    C+k+F+sk++L++H+k  H
  KHJ31060.1 310 FCCNEpgCNKRFTSKYNLNTHVKIAH 335
                 7888888***************9877 PP

  == domain 10  score: 15.4 bits;  conditional E-value: 2e-05
   zf-C2H2_4   6 CgksFsskkaLlrHlkthH 24 
                 Cg+ Fsskk+Ll+H++t+H
  KHJ31060.1 362 CGGDFSSKKNLLNHILTVH 380
                 ******************9 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.3   2.7e-07   0.00035       2      23 .]      81     104 ..      80     104 .. 0.96
   2 !    9.6   2.9     0.001       1.3       1      23 []     110     135 ..     110     135 .. 0.95
   3 !   10.2   2.7   0.00066      0.85       1      23 []     141     165 ..     141     165 .. 0.95
   4 !    9.8   2.8   0.00087       1.1       1      23 []     171     197 ..     171     197 .. 0.86
   5 !    7.7   0.1    0.0041       5.3       6      23 .]     216     234 ..     203     234 .. 0.90
   6 !    8.3   0.1    0.0026       3.3      10      23 .]     261     275 ..     258     275 .. 0.92
   7 !    8.9   0.3    0.0018       2.2       3      23 .]     278     299 ..     277     299 .. 0.92
   8 !   20.1   1.8   4.8e-07   0.00061       1      23 []     310     335 ..     310     335 .. 0.94
   9 !   11.2   0.0   0.00032      0.41       5      23 .]     361     380 ..     360     380 .. 0.94

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 2.7e-07
                 EET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   2 kCp..dCgksFkrksnLkrHirtH 23 
                 kC+   C+k+F+r+  L +H+r+H
  KHJ31060.1  81 KCTydNCDKTFNRPAKLAAHLRSH 104
                 79999******************9 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.001
                 EEET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                 + C+  +C+k + +  +L++Hi++ H
  KHJ31060.1 110 FICTytGCDKAYLQLKHLQHHIKSsH 135
                 789999*****************999 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.00066
                 EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                 + C+  +Cgk F ++  LkrH ++H
  KHJ31060.1 141 FHCEweGCGKAFLTSTRLKRHHKVH 165
                 789999*****************99 PP

  == domain 4  score: 9.8 bits;  conditional E-value: 0.00087
                 EEET...TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp...dCgksFkrksnLkrHirt.H 23 
                 +kC+    C++ F+    L+rHir+ H
  KHJ31060.1 171 FKCTnypPCSQNFRKHQTLQRHIRSeH 197
                 56666666****************999 PP

  == domain 5  score: 7.7 bits;  conditional E-value: 0.0041
                 TTEEESSHHHHHHHHHC.C CS
     zf-C2H2   6 CgksFkrksnLkrHirt.H 23 
                 C+  F ++ +L+rH+ + H
  KHJ31060.1 216 CNSGFDSSASLRRHQERaH 234
                 9999***********9999 PP

  == domain 6  score: 8.3 bits;  conditional E-value: 0.0026
                 ESSHHHHHHHHHC.C CS
     zf-C2H2  10 FkrksnLkrHirt.H 23 
                 F++ s L++Hir+ H
  KHJ31060.1 261 FTSYSKLQAHIRKeH 275
                 9************99 PP

  == domain 7  score: 8.9 bits;  conditional E-value: 0.0018
                 ETTTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   3 CpdCgksFkrksnLkrHirt.H 23 
                 C  C+ +F++  +L +H  + H
  KHJ31060.1 278 CMFCNIKFRSERELLSHVDSiH 299
                 99***************98877 PP

  == domain 8  score: 20.1 bits;  conditional E-value: 4.8e-07
                 EEET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                 + C+  +C+k+F++k+nL++H ++ H
  KHJ31060.1 310 FCCNepGCNKRFTSKYNLNTHVKIaH 335
                 679999****************9988 PP

  == domain 9  score: 11.2 bits;  conditional E-value: 0.00032
                 TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   5 dCgksFkrksnLkrHirt.H 23 
                 +Cg  F++k nL +Hi t H
  KHJ31060.1 361 GCGGDFSSKKNLLNHILTvH 380
                 79***************999 PP

>> zf-C2H2_8  C2H2-type zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.3     0.014        19      28      69 ..      72     112 ..      53     118 .. 0.77
   2 !   17.4   8.3   3.1e-06     0.004       2      87 ..     112     194 ..     111     201 .. 0.80
   3 !    6.7   0.1     0.007         9      40      73 ..     213     246 ..     207     253 .. 0.89
   4 !   23.9   0.6     3e-08   3.9e-05       6      67 ..     280     341 ..     275     347 .. 0.92
   5 ?   -0.7   0.0       1.4   1.8e+03       6      26 ..     361     382 ..     356     406 .. 0.62

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.014
   zf-C2H2_8  28 tqslegklfrcstascaetfpsmqelvahtklhykpnryfkc 69 
                 +  ++ k ++c+   c +tf    +l ah + h + +r f c
  KHJ31060.1  72 KFPSQIKNIKCTYDNCDKTFNRPAKLAAHLRSHTN-ERPFIC 112
                 356778999999999*****999999999998864.455555 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 3.1e-06
   zf-C2H2_8   2 cssygcrlafpnvrelaqhlrvhlsptqslegklfrcstascaetfpsmqelvahtklhykpnryfkcen...cllrfrthrslfkhlh 87 
                 c+  gc  a+ +    ++hl+ h++ ++++  + f+c    c ++f +   l  h k+h    + fkc n   c   fr h++l +h+ 
  KHJ31060.1 112 CTYTGCDKAYLQ----LKHLQHHIKSSHTS-ERNFHCEWEGCGKAFLTSTRLKRHHKVHE-GSKQFKCTNyppCSQNFRKHQTLQRHIR 194
                 555666666655....45666666655554.478*************************6.5788***998889**********99975 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.007
   zf-C2H2_8  40 tascaetfpsmqelvahtklhykpnryfkcencl 73 
                   sc   f s   l  h    +   ryf  e cl
  KHJ31060.1 213 GESCNSGFDSSASLRRHQERAHGSARYFCNECCL 246
                 579*************************888887 PP

  == domain 4  score: 23.9 bits;  conditional E-value: 3e-08
   zf-C2H2_8   6 gcrlafpnvrelaqhlrvhlsptqslegklfrcstascaetfpsmqelvahtklhykpnryf 67 
                  c + f + rel++h+ +  s +   e ++f c  + c + f s  +l +h k+ +  nry+
  KHJ31060.1 280 FCNIKFRSERELLSHVDSIHSGKSLEERQIFCCNEPGCNKRFTSKYNLNTHVKIAHLGNRYI 341
                 699**************9999988889999*******************************7 PP

  == domain 5  score: -0.7 bits;  conditional E-value: 1.4
   zf-C2H2_8   6 gcrlafpnvrelaqhl.rvhls 26 
                 gc   f + ++l++h+ +vhl+
  KHJ31060.1 361 GCGGDFSSKKNLLNHIlTVHLK 382
                 6777777777777664133333 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.9     0.068        87      15      25 ..      80      92 ..      68      93 .. 0.73
   2 !   16.8   0.2   5.3e-06    0.0068       2      25 ..      97     122 ..      96     123 .. 0.86
   3 !   16.8   2.3   5.4e-06    0.0069       1      26 []     126     154 ..     126     154 .. 0.91
   4 !   10.8   4.0   0.00043      0.55       2      24 ..     158     183 ..     157     185 .. 0.85
   5 !    8.8   0.1    0.0018       2.3       2      17 ..     189     205 ..     188     222 .. 0.86
   6 ?    3.3   0.7       0.1   1.3e+02       1      21 [.     225     245 ..     225     250 .. 0.87
   7 ?    6.2   0.6     0.012        16       2      24 ..     267     285 ..     266     287 .. 0.79
   8 !    7.7   0.2    0.0039         5       3      26 .]     292     323 ..     290     323 .. 0.80
   9 ?    0.3   0.0       0.9   1.2e+03       1      12 [.     326     338 ..     326     342 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.068
   zf-H2C2_2 15 yeCp..lCdkaFk 25
                 +C    Cdk+F+
  KHJ31060.1 80 IKCTydNCDKTFN 92
                6888879*****8 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 5.3e-06
   zf-H2C2_2   2 LrrHirkHtgekpyeCp..lCdkaFk 25 
                 L  H+r+Ht+e+p+ C    Cdka+ 
  KHJ31060.1  97 LAAHLRSHTNERPFICTytGCDKAYL 122
                 778***********888657***985 PP

  == domain 3  score: 16.8 bits;  conditional E-value: 5.4e-06
   zf-H2C2_2   1 nLrrHirk.HtgekpyeCp..lCdkaFkt 26 
                 +L+ Hi++ Ht+e+ ++C+   C+kaF t
  KHJ31060.1 126 HLQHHIKSsHTSERNFHCEweGCGKAFLT 154
                 6999***66***********88*****75 PP

  == domain 4  score: 10.8 bits;  conditional E-value: 0.00043
   zf-H2C2_2   2 LrrHirkHtgekpyeCp...lCdkaF 24 
                 L+rH ++H g k ++C     C+  F
  KHJ31060.1 158 LKRHHKVHEGSKQFKCTnypPCSQNF 183
                 99**************9776777766 PP

  == domain 5  score: 8.8 bits;  conditional E-value: 0.0018
   zf-H2C2_2   2 LrrHirk.HtgekpyeC 17 
                 L+rHir+ H +  py C
  KHJ31060.1 189 LQRHIRSeHLQLMPYPC 205
                 89****65*******99 PP

  == domain 6  score: 3.3 bits;  conditional E-value: 0.1
   zf-H2C2_2   1 nLrrHirkHtgekpyeCplCd 21 
                 +LrrH+   +g  +y C +C 
  KHJ31060.1 225 SLRRHQERAHGSARYFCNECC 245
                 599**999788999****995 PP

  == domain 7  score: 6.2 bits;  conditional E-value: 0.012
   zf-H2C2_2   2 LrrHirkHtgekpyeCplCdkaF 24 
                 L+ Hirk +     eC++C+ +F
  KHJ31060.1 267 LQAHIRKEH----AECMFCNIKF 285
                 788999866....49****9888 PP

  == domain 8  score: 7.7 bits;  conditional E-value: 0.0039
   zf-H2C2_2   3 rrHirk.Htgek.....pyeCp..lCdkaFkt 26 
                   H  + H g++     +++C    C+k+F++
  KHJ31060.1 292 LSHVDSiHSGKSleerqIFCCNepGCNKRFTS 323
                 578875599999877766****878*****86 PP

  == domain 9  score: 0.3 bits;  conditional E-value: 0.9
   zf-H2C2_2   1 nLrrHirk.Htge 12 
                 nL+ H +  H g 
  KHJ31060.1 326 NLNTHVKIaHLGN 338
                 89*****999985 PP

>> FOXP-CC  FOXP coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.1     0.016        21       6      29 ..      81     104 ..      77     109 .. 0.87
   2 !    9.6   0.3    0.0011       1.4       6      32 ..     111     137 ..     108     141 .. 0.92
   3 !    8.1   1.0    0.0031         4       6      29 ..     142     164 ..     139     174 .. 0.81
   4 !    9.1   0.4    0.0016       2.1       8      30 ..     175     197 ..     169     200 .. 0.90
   5 ?    0.5   0.4      0.73   9.4e+02      12      32 ..     216     236 ..     215     246 .. 0.87
   6 ?    5.4   0.3     0.022        29      16      50 ..     261     295 ..     259     299 .. 0.88
   7 ?    1.2   0.1      0.45   5.8e+02      12      33 ..     281     302 ..     275     309 .. 0.83
   8 !    8.0   0.1    0.0035       4.5       7      31 ..     312     336 ..     308     342 .. 0.91
   9 ?    1.9   0.0      0.28   3.6e+02      11      32 ..     361     382 ..     356     407 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.016
     FOXP-CC   6 vCkWPgCekvledveeflkhlnse 29 
                  C   +C+k ++  +++ +hl+s+
  KHJ31060.1  81 KCTYDNCDKTFNRPAKLAAHLRSH 104
                 6999*****************875 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0011
     FOXP-CC   6 vCkWPgCekvledveeflkhlnseHal 32 
                 +C   gC+k+  +++++++h++s+H+ 
  KHJ31060.1 111 ICTYTGCDKAYLQLKHLQHHIKSSHTS 137
                 59999********************86 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.0031
     FOXP-CC   6 vCkWPgCekvledveeflkhlnse 29 
                 +C+W gC k++ +++++ +h +  
  KHJ31060.1 142 HCEWEGCGKAFLTSTRLKRHHK-V 164
                 7***************999954.3 PP

  == domain 4  score: 9.1 bits;  conditional E-value: 0.0016
     FOXP-CC   8 kWPgCekvledveeflkhlnseH 30 
                 + P C++ + +++++++h++seH
  KHJ31060.1 175 NYPPCSQNFRKHQTLQRHIRSEH 197
                 68********************* PP

  == domain 5  score: 0.5 bits;  conditional E-value: 0.73
     FOXP-CC  12 CekvledveeflkhlnseHal 32 
                 C++ +++++++ +h +++H  
  KHJ31060.1 216 CNSGFDSSASLRRHQERAHGS 236
                 9999**************975 PP

  == domain 6  score: 5.4 bits;  conditional E-value: 0.022
     FOXP-CC  16 ledveeflkhlnseHalddkstaqlrvqmqvvqql 50 
                 +++++++++h+++eHa +  +  ++r   ++++++
  KHJ31060.1 261 FTSYSKLQAHIRKEHAECMFCNIKFRSERELLSHV 295
                 68999************999999999999988876 PP

  == domain 7  score: 1.2 bits;  conditional E-value: 0.45
     FOXP-CC  12 CekvledveeflkhlnseHald 33 
                 C+  + +  e+l+h++s H+ +
  KHJ31060.1 281 CNIKFRSERELLSHVDSIHSGK 302
                 88899999*********99865 PP

  == domain 8  score: 8.0 bits;  conditional E-value: 0.0035
     FOXP-CC   7 CkWPgCekvledveeflkhlnseHa 31 
                 C+ PgC+k +++  ++  h++ +H 
  KHJ31060.1 312 CNEPGCNKRFTSKYNLNTHVKIAHL 336
                 999*****************99995 PP

  == domain 9  score: 1.9 bits;  conditional E-value: 0.28
     FOXP-CC  11 gCekvledveeflkhlnseHal 32 
                 gC   +++ +++l+h+ + H  
  KHJ31060.1 361 GCGGDFSSKKNLLNHILTVHLK 382
                 89999***********999964 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   0.00015      0.19       7      24 ..      87     104 ..      85     104 .. 0.95
   2 ?   -2.0   0.6       3.9     5e+03       7      23 ..     117     133 ..     117     134 .. 0.72
   3 ?   -1.6   0.0       2.9   3.7e+03       7      20 ..     148     161 ..     148     161 .. 0.93
   4 !    7.2   0.2    0.0049       6.3       7      23 ..     179     195 ..     177     197 .. 0.89
   5 ?    2.7   0.0      0.13   1.7e+02       7      21 ..     216     230 ..     214     231 .. 0.91
   6 ?   -3.2   0.0       9.3   1.2e+04      16      22 ..     266     272 ..     261     272 .. 0.78
   7 !   11.0   0.4   0.00032      0.41       4      23 ..     278     297 ..     277     300 .. 0.92
   8 ?    5.9   0.5     0.013        17       7      22 ..     317     332 ..     317     332 .. 0.97
   9 ?    1.2   0.0      0.38   4.8e+02      11      21 ..     366     376 ..     363     380 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00015
                  TTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz   7 CdKyFksenaldnHlkSK 24 
                  CdK+F+    l +Hl+S+
   KHJ31060.1  87 CDKTFNRPAKLAAHLRSH 104
                  ****************97 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 3.9
                  TTBBBSSHHHHHCCTTS CS
  zf-C2H2_jaz   7 CdKyFksenaldnHlkS 23 
                  CdK +   + l+ H+kS
   KHJ31060.1 117 CDKAYLQLKHLQHHIKS 133
                  77776666778889998 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 2.9
                  TTBBBSSHHHHHCC CS
  zf-C2H2_jaz   7 CdKyFksenaldnH 20 
                  C K F ++  l+ H
   KHJ31060.1 148 CGKAFLTSTRLKRH 161
                  99****99999999 PP

  == domain 4  score: 7.2 bits;  conditional E-value: 0.0049
                  TTBBBSSHHHHHCCTTS CS
  zf-C2H2_jaz   7 CdKyFksenaldnHlkS 23 
                  C+  F ++++l+ H++S
   KHJ31060.1 179 CSQNFRKHQTLQRHIRS 195
                  7778************9 PP

  == domain 5  score: 2.7 bits;  conditional E-value: 0.13
                  TTBBBSSHHHHHCCT CS
  zf-C2H2_jaz   7 CdKyFksenaldnHl 21 
                  C+  F s+ +l+ H+
   KHJ31060.1 216 CNSGFDSSASLRRHQ 230
                  **************6 PP

  == domain 6  score: -3.2 bits;  conditional E-value: 9.3
                  HHHCCTT CS
  zf-C2H2_jaz  16 aldnHlk 22 
                   l++H++
   KHJ31060.1 266 KLQAHIR 272
                  5899*96 PP

  == domain 7  score: 11.0 bits;  conditional E-value: 0.00032
                  BTTTTBBBSSHHHHHCCTTS CS
  zf-C2H2_jaz   4 CvlCdKyFksenaldnHlkS 23 
                  C  C+  F se+ l  H+ S
   KHJ31060.1 278 CMFCNIKFRSERELLSHVDS 297
                  9****************977 PP

  == domain 8  score: 5.9 bits;  conditional E-value: 0.013
                  TTBBBSSHHHHHCCTT CS
  zf-C2H2_jaz   7 CdKyFksenaldnHlk 22 
                  C+K F s ++l +H+k
   KHJ31060.1 317 CNKRFTSKYNLNTHVK 332
                  **************87 PP

  == domain 9  score: 1.2 bits;  conditional E-value: 0.38
                  BSSHHHHHCCT CS
  zf-C2H2_jaz  11 FksenaldnHl 21 
                  F+s ++l nH+
   KHJ31060.1 366 FSSKKNLLNHI 376
                  99********9 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.1   0.00015      0.19       6      24 ..      87     105 ..      87     106 .. 0.95
   2 ?    0.2   0.1      0.88   1.1e+03       6      22 ..     179     195 ..     177     196 .. 0.84
   3 ?    1.2   0.1      0.42   5.3e+02       6      19 ..     216     229 ..     214     231 .. 0.89
   4 !   11.8   0.2   0.00019      0.24       3      22 ..     278     297 ..     277     297 .. 0.91
   5 !   10.4   0.1   0.00053      0.68       6      20 ..     317     331 ..     316     333 .. 0.94
   6 ?   -0.6   0.0       1.5     2e+03      10      19 ..     366     375 ..     365     376 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00015
      zf-met   6 CnvtfnsesqlksHlqGKk 24 
                 C++tfn ++ l +Hl++++
  KHJ31060.1  87 CDKTFNRPAKLAAHLRSHT 105
                 *****************85 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.88
      zf-met   6 CnvtfnsesqlksHlqG 22 
                 C   f   ++l+ H ++
  KHJ31060.1 179 CSQNFRKHQTLQRHIRS 195
                 6777888999****998 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.42
      zf-met   6 CnvtfnsesqlksH 19 
                 Cn  f s ++l+ H
  KHJ31060.1 216 CNSGFDSSASLRRH 229
                 *************9 PP

  == domain 4  score: 11.8 bits;  conditional E-value: 0.00019
      zf-met   3 CelCnvtfnsesqlksHlqG 22 
                 C  Cn++f se  l sH  +
  KHJ31060.1 278 CMFCNIKFRSERELLSHVDS 297
                 999**************765 PP

  == domain 5  score: 10.4 bits;  conditional E-value: 0.00053
      zf-met   6 CnvtfnsesqlksHl 20 
                 Cn++f+s+ +l++H 
  KHJ31060.1 317 CNKRFTSKYNLNTHV 331
                 **************6 PP

  == domain 6  score: -0.6 bits;  conditional E-value: 1.5
      zf-met  10 fnsesqlksH 19 
                 f+s+++l +H
  KHJ31060.1 366 FSSKKNLLNH 375
                 99*******9 PP

>> DUF4187  Domain of unknown function (DUF4187)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.1   2.2e-06    0.0028      17      45 ..     266     294 ..     262     296 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 2.2e-06
     DUF4187  17 klleyLReeylYCfwCgtkYedeedLeen 45 
                 kl +++R+e+  C++C +k+ +e++L ++
  KHJ31060.1 266 KLQAHIRKEHAECMFCNIKFRSERELLSH 294
                 78999*******************99765 PP

>> zf_Hakai  C2H2 Hakai zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.3      0.31     4e+02       6      26 ..      82     101 ..      81     104 .. 0.82
   2 !   15.8   1.3   6.4e-06    0.0082       4      30 ..     110     135 ..     109     137 .. 0.95
   3 ?    0.3   0.1      0.47     6e+02       4      25 ..     141     161 ..     140     164 .. 0.82
   4 ?    2.2   1.5      0.12   1.5e+02       4      31 ..     171     198 ..     169     199 .. 0.90
   5 ?    4.5   0.1     0.023        29      21      30 ..     266     275 ..     261     277 .. 0.82
   6 ?   -0.6   0.1       0.9   1.1e+03      18      30 ..     287     299 ..     278     300 .. 0.77
   7 !    8.5   0.1    0.0013       1.7       3      31 ..     309     336 ..     308     336 .. 0.91
   8 ?    1.4   0.0      0.21   2.7e+02       9      32 .]     359     382 ..     337     382 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.31
    zf_Hakai   6 CtvvegCrRTYLSqRDLqAHI 26 
                 Ct+ ++C  T+     L AH 
  KHJ31060.1  82 CTY-DNCDKTFNRPAKLAAHL 101
                 999.99***997777888886 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 6.4e-06
    zf_Hakai   4 FmCtvvegCrRTYLSqRDLqAHIkhRH 30 
                 F+Ct+  gC   YL  + Lq HIk  H
  KHJ31060.1 110 FICTY-TGCDKAYLQLKHLQHHIKSSH 135
                 9****.******************988 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.47
    zf_Hakai   4 FmCtvvegCrRTYLSqRDLqAH 25 
                 F C   egC   +L    L+ H
  KHJ31060.1 141 FHCEW-EGCGKAFLTSTRLKRH 161
                 88999.9***999987777666 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.12
    zf_Hakai   4 FmCtvvegCrRTYLSqRDLqAHIkhRHl 31 
                 F Ct+   C   +  ++ Lq HI   Hl
  KHJ31060.1 171 FKCTNYPPCSQNFRKHQTLQRHIRSEHL 198
                 889999999999999********99997 PP

  == domain 5  score: 4.5 bits;  conditional E-value: 0.023
    zf_Hakai  21 DLqAHIkhRH 30 
                  LqAHI   H
  KHJ31060.1 266 KLQAHIRKEH 275
                 6*****9988 PP

  == domain 6  score: -0.6 bits;  conditional E-value: 0.9
    zf_Hakai  18 SqRDLqAHIkhRH 30 
                 S+R+L  H+   H
  KHJ31060.1 287 SERELLSHVDSIH 299
                 8999999997655 PP

  == domain 7  score: 8.5 bits;  conditional E-value: 0.0013
    zf_Hakai   3 vFmCtvvegCrRTYLSqRDLqAHIkhRHl 31 
                 +F C    gC   + S+ +L+ H+k  Hl
  KHJ31060.1 309 IFCCNE-PGCNKRFTSKYNLNTHVKIAHL 336
                 899998.*****************98885 PP

  == domain 8  score: 1.4 bits;  conditional E-value: 0.21
    zf_Hakai   9 vegCrRTYLSqRDLqAHIkhRHlr 32 
                  +gC   + S+++L  HI   Hl+
  KHJ31060.1 359 LNGCGGDFSSKKNLLNHILTVHLK 382
                 5788888899********988886 PP

>> zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.2       1.6   2.1e+03      53      87 ..      11      45 ..       3      71 .. 0.53
   2 ?    1.2   3.4      0.44   5.7e+02      91     122 ..     130     163 ..      72     167 .. 0.71
   3 ?    6.4   5.7     0.011        13      20     110 ..     159     247 ..     148     253 .. 0.72
   4 !   10.3   1.2   0.00065      0.84       1      56 [.     278     335 ..     278     341 .. 0.82
   5 !   12.4   0.1   0.00015      0.19      38      81 ..     362     402 ..     357     411 .. 0.63

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 1.6
  zf-C2H2_3rep 53 lsvhpsdfklskvaqkknlsasedssqklelsksa 87
                  +++hps+  +   ++++++s +++s+++ + ++s 
    KHJ31060.1 11 IAAHPSERSKRLRTDDSRSSLKSKSNNNEDDESSH 45
                  45565554333333333333333333333333333 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.44
  zf-C2H2_3rep  91 nnsenesgvrkfvcrf..cGlkfdllpdlGrhhq 122
                   + +++++++r+f c +  cG  f     l rhh+
    KHJ31060.1 130 HIKSSHTSERNFHCEWegCGKAFLTSTRLKRHHK 163
                   3445667788888876667778877888888887 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.011
  zf-C2H2_3rep  20 erhhvqfveqclllqci...pcgshfgnaeelwlhvlsvhpsdfklskvaqkknlsasedssqklelsksasvennsenesgvrkfvcrfcGlk 110
                   +rhh ++ e  + ++c    pc + f +++ l  h+ s h + +    v+      ++e  s ++   +sas++ ++e+++g+ ++ c  c l 
    KHJ31060.1 159 KRHH-KVHEGSKQFKCTnypPCSQNFRKHQTLQRHIRSEHLQLMPYPCVHV--DPVTGE--SCNSGFDSSASLRRHQERAHGSARYFCNECCLT 247
                   3444.3345555555544449*****************9988776666655..334455..4566677788899999************99985 PP

  == domain 4  score: 10.3 bits;  conditional E-value: 0.00065
  zf-C2H2_3rep   1 caicldsftnkkvlethvqerhhvqfveqclllqci..pcgshfgnaeelwlhvlsvh 56 
                   c  c   f   + l +hv+  h  +++e+ +++ c    c   f+++ +l +hv  +h
    KHJ31060.1 278 CMFCNIKFRSERELLSHVDSIHSGKSLEERQIFCCNepGCNKRFTSKYNLNTHVKIAH 335
                   7778888888888999999999999999999999964249999999999999998888 PP

  == domain 5  score: 12.4 bits;  conditional E-value: 0.00015
  zf-C2H2_3rep  38 cgshfgnaeelwlhvlsvhpsdfklskvaqkknlsasedssqkl 81 
                   cg  f+++++l+ h+l+vh + ++++k+ ++kn  as++  +++
    KHJ31060.1 362 CGGDFSSKKNLLNHILTVHLK-IQTLKSRRNKN--ASQKIVTNN 402
                   *******************64.33333333333..333333222 PP

>> zf_ZIC  Zic proteins zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.18   2.3e+02      23      38 ..      86     101 ..      79     104 .. 0.87
   2 ?   -0.1   0.3      0.78     1e+03      24      42 ..     117     135 ..     113     137 .. 0.89
   3 ?   -2.3   0.1       3.9     5e+03      10      12 ..     143     145 ..     138     161 .. 0.63
   4 ?    2.0   0.1      0.18   2.3e+02      22      42 ..     177     197 ..     169     198 .. 0.89
   5 ?    2.5   0.2      0.12   1.5e+02      21      44 ..     278     301 ..     270     302 .. 0.81
   6 !   14.5   0.1   2.2e-05     0.028      22      44 ..     315     337 ..     306     338 .. 0.92
   7 ?   -0.0   0.0      0.75   9.6e+02      23      41 ..     361     379 ..     353     381 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.18
                 -----BSSHHHHHHHH CS
      zf_ZIC  23 pCsktFstmhelVtHl 38 
                  C+ktF++   l +Hl
  KHJ31060.1  86 NCDKTFNRPAKLAAHL 101
                 7******999999997 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.78
                 ----BSSHHHHHHHHHCTT CS
      zf_ZIC  24 CsktFstmhelVtHltveH 42 
                 C+k + ++  l  H+   H
  KHJ31060.1 117 CDKAYLQLKHLQHHIKSSH 135
                 **************98877 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 3.9
                 --B CS
      zf_ZIC  10 CkW 12 
                 C+W
  KHJ31060.1 143 CEW 145
                 555 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.18
                 ------BSSHHHHHHHHHCTT CS
      zf_ZIC  22 kpCsktFstmhelVtHltveH 42 
                  pCs+ F +   l  H+  eH
  KHJ31060.1 177 PPCSQNFRKHQTLQRHIRSEH 197
                 69*******99*******999 PP

  == domain 5  score: 2.5 bits;  conditional E-value: 0.12
                 -------BSSHHHHHHHHHCTTT- CS
      zf_ZIC  21 kkpCsktFstmhelVtHltveHVG 44 
                    C+ +F +  el +H+   H G
  KHJ31060.1 278 CMFCNIKFRSERELLSHVDSIHSG 301
                 567**************9877755 PP

  == domain 6  score: 14.5 bits;  conditional E-value: 2.2e-05
                 ------BSSHHHHHHHHHCTTT- CS
      zf_ZIC  22 kpCsktFstmhelVtHltveHVG 44 
                   C+k F++ ++l tH+ + H G
  KHJ31060.1 315 PGCNKRFTSKYNLNTHVKIAHLG 337
                 56*******************98 PP

  == domain 7  score: -0.0 bits;  conditional E-value: 0.75
                 -----BSSHHHHHHHHHCT CS
      zf_ZIC  23 pCsktFstmhelVtHltve 41 
                  C+  Fs+  +l +H+   
  KHJ31060.1 361 GCGGDFSSKKNLLNHILTV 379
                 59999**********8544 PP

>> zf-C2H2_aberr  Aberrant zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1      0.03        39      35      51 ..      78      94 ..      66     109 .. 0.55
   2 ?    6.9   4.3    0.0049       6.3       2      66 ..      81     136 ..      80     139 .. 0.82
   3 ?    3.9   0.6      0.04        52     140     162 ..     140     162 ..     130     169 .. 0.77
   4 ?    2.9   4.1     0.085   1.1e+02       1      66 [.     141     198 ..     141     208 .. 0.76
   5 ?    6.8   0.4    0.0053       6.7       7      72 ..     215     282 ..     203     295 .. 0.78
   6 ?   10.9   0.4   0.00029      0.37     133     161 ..     302     330 ..     291     336 .. 0.78
   7 ?   -1.4   0.0       1.8   2.3e+03     146     162 ..     360     376 ..     355     411 .. 0.56

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.03
  zf-C2H2_aberr 35 fslkCpvrkCsesivel 51
                   +++kC + +C++++ + 
     KHJ31060.1 78 KNIKCTYDNCDKTFNRP 94
                   66777777776655432 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0049
  zf-C2H2_aberr   2 kClykaCdlkyssvlglrrhlveykhslytnsefslkCpvrkCsesivelentelleehlekeha 66 
                    kC y +Cd ++++   l  hl+   h   tn e  + C +  C++++ +l+    l++h++  h+
     KHJ31060.1  81 KCTYDNCDKTFNRPAKLAAHLRS--H---TN-ERPFICTYTGCDKAYLQLK---HLQHHIKSSHT 136
                    9*******************985..6...44.48899******99888776...56778888776 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.04
  zf-C2H2_aberr 140 liyCripGCgkrfkslmaYkYhc 162
                     ++C+ +GCgk f   +  k h 
     KHJ31060.1 140 NFHCEWEGCGKAFLTSTRLKRHH 162
                    589**********8887777775 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.085
  zf-C2H2_aberr   1 ykClykaCdlkyssvlglrrhlveykhslytnsefslkCp.vrkCsesivelentelleehlekeha 66 
                    + C ++ C+  + ++  l+rh +        + ++++kC  +  C     ++ + + l+ h++ eh 
     KHJ31060.1 141 FHCEWEGCGKAFLTSTRLKRHHKVH------EGSKQFKCTnYPPC---SQNFRKHQTLQRHIRSEHL 198
                    6788999999999999999985443......34588889637778...5688888999999999997 PP

  == domain 5  score: 6.8 bits;  conditional E-value: 0.0053
  zf-C2H2_aberr   7 aCdlkyssvlglrrhlveykhs.lytnsefslkCpvrkCses.ivelentelleehlekehaakllel 72 
                    +C+  ++s+ +lrrh  +++ s  y+ +e  l   ++   +     ++    l+ h++keha+ +   
     KHJ31060.1 215 SCNSGFDSSASLRRHQERAHGSaRYFCNECCLTGSFNSDGTPlNLGFTSYSKLQAHIRKEHAECMFCN 282
                    7999***********99887652699998888888765544325689999***********9665544 PP

  == domain 6  score: 10.9 bits;  conditional E-value: 0.00029
  zf-C2H2_aberr 133 iDidkkdliyCripGCgkrfkslmaYkYh 161
                    +  ++++++ C+ pGC+krf s      h
     KHJ31060.1 302 KSLEERQIFCCNEPGCNKRFTSKYNLNTH 330
                    557889**************997665555 PP

  == domain 7  score: -1.4 bits;  conditional E-value: 1.8
  zf-C2H2_aberr 146 pGCgkrfkslmaYkYhc 162
                    +GCg  f s      h 
     KHJ31060.1 360 NGCGGDFSSKKNLLNHI 376
                    55555555544433333 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.1     0.021        26       7      24 ..      87     104 ..      81     107 .. 0.90
   2 ?   -2.2   0.4       3.7   4.7e+03      22      25 ..     159     162 ..     148     166 .. 0.51
   3 ?   -2.5   0.2       4.3   5.5e+03       7      24 ..     216     234 ..     215     234 .. 0.76
   4 ?   -3.2   0.7       7.4   9.4e+03       2       7 ..     239     244 ..     238     244 .. 0.81
   5 ?   -3.2   0.1       7.2   9.3e+03      11      20 ..     261     270 ..     260     275 .. 0.64
   6 ?   -1.5   0.1       2.1   2.7e+03       3      20 ..     277     294 ..     277     297 .. 0.84
   7 ?   13.3   0.5   5.1e-05     0.065       2      21 ..     310     331 ..     309     337 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.021
   zf-C2H2_6   7 CsksFpslqaLggHkksH 24 
                 C+k+F+    L  H++sH
  KHJ31060.1  87 CDKTFNRPAKLAAHLRSH 104
                 *****************9 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3.7
   zf-C2H2_6  22 ksHr 25 
                 k+H+
  KHJ31060.1 159 KRHH 162
                 3444 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 4.3
   zf-C2H2_6   7 CsksFpslqaLggHk.ksH 24 
                 C+  F s  +L+ H  + H
  KHJ31060.1 216 CNSGFDSSASLRRHQeRAH 234
                 8888888889999965555 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 7.4
   zf-C2H2_6   2 heCsvC 7  
                 + C++C
  KHJ31060.1 239 YFCNEC 244
                 66***9 PP

  == domain 5  score: -3.2 bits;  conditional E-value: 7.2
   zf-C2H2_6  11 FpslqaLggH 20 
                 F s+  L  H
  KHJ31060.1 261 FTSYSKLQAH 270
                 7777777777 PP

  == domain 6  score: -1.5 bits;  conditional E-value: 2.1
   zf-C2H2_6   3 eCsvCsksFpslqaLggH 20 
                 eC  C+  F+s  +L  H
  KHJ31060.1 277 ECMFCNIKFRSERELLSH 294
                 68889999*999888766 PP

  == domain 7  score: 13.3 bits;  conditional E-value: 5.1e-05
   zf-C2H2_6   2 heCsv..CsksFpslqaLggHk 21 
                 ++C++  C+k+F s ++L++H 
  KHJ31060.1 310 FCCNEpgCNKRFTSKYNLNTHV 331
                 7888888**************5 PP

>> zf-C2H2_12  Zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   1.0    0.0018       2.4      20      53 ..     107     140 ..     103     146 .. 0.86
   2 ?    1.8   0.2      0.14   1.8e+02      36      50 ..     185     199 ..     178     205 .. 0.76
   3 ?    3.4   0.2     0.045        58      37      52 ..     264     279 ..     258     293 .. 0.81
   4 ?   -0.9   0.0         1   1.3e+03      42      58 ..     374     390 ..     365     397 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0018
  zf-C2H2_12  20 rrglvCmvCgeslaslklstikrHIrqvHPesls 53 
                 +r  +C   g+  a l+l+++++HI+  H    +
  KHJ31060.1 107 ERPFICTYTGCDKAYLQLKHLQHHIKSSHTSERN 140
                 566899999********************87665 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.14
  zf-C2H2_12  36 klstikrHIrqvHPe 50 
                 k +t++rHIr  H +
  KHJ31060.1 185 KHQTLQRHIRSEHLQ 199
                 45799******9965 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.045
  zf-C2H2_12  37 lstikrHIrqvHPesl 52 
                  s++++HIr+ H+e +
  KHJ31060.1 264 YSKLQAHIRKEHAECM 279
                 688999******9876 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 1
  zf-C2H2_12  42 rHIrqvHPeslslseee 58 
                 +HI++vH +  +l+++ 
  KHJ31060.1 374 NHILTVHLKIQTLKSRR 390
                 7******9888877654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1229  (0.0685482); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 2591.86
//
Query:       KHJ31061.1  [L=255]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       634  (0.0353617); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1864.34
//
Query:       KHJ31062.1  [L=158]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1148.24
//
Query:       KHJ31063.1  [L=240]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.065   12.8   0.0      0.093   12.2   0.0    1.2  1  Casc1     Cancer susceptibility candidate 1


Domain annotation for each model (and alignments):
>> Casc1  Cancer susceptibility candidate 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   5.2e-06     0.093      38      93 ..     104     161 ..      87     180 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.2e-06
       Casc1  38 ep..ivDied.sl..ireWllqldieneiifsletklvryelyiskkeeeeakaargyvtd 93 
                 +p  + Di++ ++  +r W ++l +  +ii+s++++l+++++ i+   +ee +a+++y  +
  KHJ31063.1 104 FPkeLADIIAiCQrrERAWHARLLVCTTIISSIDSALANFQDEIE---KEEVVAFKAYLRQ 161
                 345555655435522677***************************...5889999999766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       469  (0.0261587); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1681.09
//
Query:       KHJ31064.1  [L=200]
Description: putative 40s ribosomal protein s7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-80  269.8   0.5    1.2e-80  269.6   0.5    1.0  1  Ribosomal_S7e  Ribosomal protein S7e
  ------ inclusion threshold ------
       0.29   10.5   2.5        1.2    8.5   0.2    2.1  2  Vezatin        Mysoin-binding motif of peroxisomes


Domain annotation for each model (and alignments):
>> Ribosomal_S7e  Ribosomal protein S7e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  269.6   0.5   1.4e-84   1.2e-80       4     184 .]      11     195 ..       8     195 .. 0.97

  Alignments for each domain:
  == domain 1  score: 269.6 bits;  conditional E-value: 1.4e-84
                    SSS-S---HHHHHHHHHHHHHHHHTSSCHHHHTT--ECEEEEEEETSSCEEEEEEEEHHHHHHTTTCHHHHHHHHHHHC.SSEEEEEEE-----SS CS
  Ribosomal_S7e   4 kpkgeepteleeqvaqalldleanssdlkaelrelqissakevevkkkkkaivifvpvpllkafqkiqqrlvreLeKkfsgkhvvfvaqRrilkkp 99 
                    ++++++p+ele+++a+al+dle+n++dlk  lr+lq++sa+e+e++++kkaivifvpvp+l+ f+++qqrl+reLeKkfs++hv+++a+Rril++p
     KHJ31064.1  11 STSRQRPSELENSIASALYDLETNTTDLKVALRPLQFVSAREIEINHGKKAIVIFVPVPSLQGFHRVQQRLTRELEKKFSDRHVLILASRRILPRP 106
                    567899****************************************************************************************** PP

                    CG.....TTSTSS--TTSSHHHHHHHHHHHHCTTS-EEEEEEEE-SSS-EEEEEEEESCTCCCHHHHHHHHHHHHHHHHS-BEEEEEEX CS
  Ribosomal_S7e 100 tr....rskkkqkrprsrtltaVhdaiLedlvyPseivGkrirvrldgskllkvfLdkkdqnnveekldtfsavykkLtgkdvvFefpe 184
                    +r    r++ +qkrprsrtltaVhdaiL+dlvyP+eivGkr+r++ dgsk+lkv+L++k++ nv+++ldt+ +vy+kLtg+ v+Fefp+
     KHJ31064.1 107 KRssrsRTSLTQKRPRSRTLTAVHDAILNDLVYPVEIVGKRLRTKEDGSKILKVILEEKERGNVDHRLDTYCEVYRKLTGRGVNFEFPQ 195
                    *9887777889****************************************************************************96 PP

>> Vezatin  Mysoin-binding motif of peroxisomes
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.2   0.00013       1.2      95     139 ..       1      48 [.       1      57 [. 0.83
   2 ?    2.2   0.2     0.011        97     223     271 ..      70     133 ..      55     136 .. 0.64

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00013
     Vezatin  95 lpPisrledqsqs.rrcagLrkalystlsalflnlrkailkLlp..ls 139
                 ++P +++ ++s+s +r+++L + ++s+l +l +n+    ++L+p  ++
  KHJ31064.1   1 MSPLNKIAANSTSrQRPSELENSIASALYDLETNTTDLKVALRPlqFV 48 
                 58*****76666526899************************996654 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.011
     Vezatin 223 llqsLshvlaecleeLhrifeteese...............ltperreraraklrkLnsLstli 271
                  lq+++ v++ ++ eL++ f++ +                  ++ +  + r  +r L +++++i
  KHJ31064.1  70 SLQGFHRVQQRLTRELEKKFSDRHVLilasrrilprpkrssRSRTSLTQKRPRSRTLTAVHDAI 133
                 5899999999999999555555555455555555444432322223344555677788888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1439.83
//
Query:       KHJ31065.1  [L=575]
Description: putative dynactin arp1 p62 subunit ro2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.2e-189  631.0   2.2   1.5e-189  630.8   2.2    1.0  1  Dynactin_p62  Dynactin p62 family


Domain annotation for each model (and alignments):
>> Dynactin_p62  Dynactin p62 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  630.8   2.2  8.4e-194  1.5e-189       1     469 [.      56     512 ..      56     521 .. 0.91

  Alignments for each domain:
  == domain 1  score: 630.8 bits;  conditional E-value: 8.4e-194
  Dynactin_p62   1 PlehLlyCedChqirCpRCvteeivtyyCPnCLFevpssnvkseGnRCtRsCfqCPiCisplavtsleneedkslldeasasqsgpyiLsCsyCsWs 97 
                   Ple+LlyCedC+qirCpRCv +eivt+yCPnCLFevpss+vkseGnRCtRsCfqCPiCi+pl+vtsle ++d   l  +sa+ +gp+iL+C++C+W+
    KHJ31065.1  56 PLEYLLYCEDCRQIRCPRCVLDEIVTWYCPNCLFEVPSSTVKSEGNRCTRSCFQCPICIAPLSVTSLEPPSD--GLRVDSAPPHGPFILNCAFCMWT 150
                   9********************************************************************994..456889999************** PP

  Dynactin_p62  98 sleigikFdkpngiraqlsklknggkkrltakersklkerrkeaessseeeaeeeeseeedetaledsdekldaearfanLkaFYksqlaeassasa 194
                   ++eigikF+k+ngi+aqlsk++ +g +++tak+r   +++ +++   ++  a+++  + ede++  ds+ +ld+e++f++Lk+FY+sqlae  ++s 
    KHJ31065.1 151 TKEIGIKFEKQNGIFAQLSKMNGAGATNITAKNR---RKDLHKR---QTVLADMKVISVEDEESHVDSSLNLDPESQFSSLKSFYQSQLAEL-TPSG 240
                   *******************************999...3333333...3333444444455555566799**********************8.5777 PP

  Dynactin_p62 195 elsaledlgfsspsalsRimslYtgkslakkkkkskltvmRealtaseGlki..adaldesaaieklkkegwdatasteqraeqaeeavrfvdeLrP 289
                   +l   +d gf+sp++lsRim lYtg sl ++ +++k++vmRea +a+eGl+i  ++++d++++i++l +egw++t+s +qr+e ++ + rf ++L+P
    KHJ31065.1 241 PLGFGSDFGFGSPGTLSRIMGLYTGGSLIDEISNAKVSVMREARHATEGLQIfeHTQADDKKIINRLFSEGWQSTSSCAQRREITNLNKRFLSDLKP 337
                   7756677********************************************833446788999********************************** PP

  Dynactin_p62 290 ipvllrtkRskRCkaCrhilskPeakvqstRfrirlvalsyiPtitirplklsaetvasapavaeealleplkpvqflltlknplfdsvrvtlatps 386
                   i++llrtkRskRC+aCr+ilskP+akvqstR+rir+va sy+P+i+i+pl++s     s+p      ll p+kp+qfll  knplf++++vtla+ps
    KHJ31065.1 338 IAYLLRTKRSKRCRACRQILSKPDAKVQSTRYRIRMVASSYVPSINIKPLHPS-----SQP------LLIPFKPFQFLLICKNPLFEKIKVTLAAPS 423
                   ***************************************************94.....456......699*************************** PP

  Dynactin_p62 387 vtpgrvaskvtiLCPqfevgantDvwdeaLk....kskkakekrkseagaa..ekqaeagkvwergRnwvsvvlevvPaslklekeeee 469
                   +tp +  sk tiLCPqfevgantDvwd aL+    +++++++ r+++ + +  ++qaeagk+wergRnwvsvvlev+P+  k+++++ e
    KHJ31065.1 424 ETPSKNCSKTTILCPQFEVGANTDVWDAALQgedgNKNTMNDIRRGKIELSegQQQAEAGKIWERGRNWVSVVLEVIPSDCKVDEKSVE 512
                   *******************************9988778888889988887777999***********************9988844333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (575 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       656  (0.0365888); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 4146.93
//
Query:       KHJ31066.1  [L=828]
Description: putative phd-finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      5e-34  116.8   6.0      5e-34  116.8   6.0    2.9  3  zf-HC5HC2H_2  PHD-zinc-finger like domain
    1.5e-27   97.0   0.0    8.6e-27   94.5   0.0    2.3  1  EPL1          Enhancer of polycomb-like
    7.6e-27   93.4   5.9    7.6e-27   93.4   5.9    3.0  3  zf-HC5HC2H    PHD-like zinc-binding domain
    1.9e-14   52.9   2.9    1.9e-14   52.9   2.9    2.5  2  PHD_2         PHD-finger
      2e-09   37.2  23.4      8e-09   35.3   9.8    2.9  2  PHD           PHD-finger
  ------ inclusion threshold ------
        1.9    8.9  23.4      0.058   13.7   6.9    3.2  2  zf-RING-like  RING-like domain


Domain annotation for each model (and alignments):
>> zf-HC5HC2H_2  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   2.4     0.027        81      44      84 ..     423     465 ..     410     468 .. 0.76
   2 !  116.8   6.0   1.7e-37     5e-34       2     110 .]     490     606 ..     489     606 .. 0.96
   3 ?   -2.8   0.2       2.3   6.8e+03      54      70 ..     655     671 ..     638     682 .. 0.65

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.027
  zf-HC5HC2H_2  44 vdvekikkerlkekCllCkkr....kGaciqCskkeCktafHvtC 84 
                   v+ e+ + e+  ++C++C++     + a + C    C+ a H +C
    KHJ31066.1 423 VNGEAQAGEEQDSRCAICDDGdcenTNAIVFCDG--CDLAVHQHC 465
                   4555566677899*****9987766777788877..********* PP

  == domain 2  score: 116.8 bits;  conditional E-value: 1.7e-37
  zf-HC5HC2H_2   2 eCvlCkkkgGalkktsderwvHvlCallvpevsfsnvaerepvd.vekikkerlkekCllCkkrkGaciqCskkeCktafHvtCalaaglvmeledl 97 
                   +C++C++ +Ga+k+ts ++w+H+lCa+++pevs+ n++ +epv  +ek++k+r+k++C+lC++r+GaciqC +k+C++afHvtCa++a+l++++++ 
    KHJ31066.1 490 TCIFCPNLDGAFKQTSASKWAHLLCAIWIPEVSIGNTSFMEPVMdIEKVPKTRWKLTCYLCNQRMGACIQCGNKSCYQAFHVTCARRARLFLKMKNN 586
                   7*****************************************999***************************************************9 PP

  zf-HC5HC2H_2  98 ek.......klkvialckkh 110
                   +         ++++a+c kh
    KHJ31066.1 587 QGtlsllegVTNMKAFCDKH 606
                   88899999889999999998 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 2.3
  zf-HC5HC2H_2  54 lkekCllCkkrkGaciq 70 
                   l+e+ ++C++++G++++
    KHJ31066.1 655 LSEHQVNCSQTRGIKVE 671
                   45555667777776654 PP

>> EPL1  Enhancer of polycomb-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.5   0.0   2.9e-30   8.6e-27       1     157 []     146     394 ..     146     394 .. 0.80

  Alignments for each domain:
  == domain 1  score: 94.5 bits;  conditional E-value: 2.9e-30
        EPL1   1 rqprldikkkLkviseeevdgldeseseeeiseknsnkens..qqavetgvdkkeen...............................ekhqviaaakk 66 
                 ++p+ldi+ +L+ +s++evdg  e+es   i++  s k++       ++g ++ +++                               +          
  KHJ31066.1 146 FHPNLDIDLPLRAFSASEVDGQLEKESVIPITSPLSCKRQFmpG---TEGANQLDQKsgplalglidisklripgtpgggkrrpgrppK---------- 231
                 799********************998887776655555544432...333333333334566666666655555555555555555540.......... PP

        EPL1  67 kesssasske...............................slkkeelkLpkPsfre.............................ferppssyirfse 105
                          +                                + ke+lkL kPsfr                              f rp++++i+fs+
  KHJ31066.1 232 ---------DpvaffaakaaaklgkgfhynpqktsnhmppiPNIKENLKLHKPSFRLsntlshfennqesyvdklmvnvgyqesnlFYRPERTLIKFSD 321
                 .........044444444444444444455666777888888999***********************************9999999999********* PP

        EPL1 106 ks.eeeldd....................eveYdMDEeDekWLeelnekrkkegvekisediFEivmdrlEke 157
                  + eeeld                     +veYdMDE+D+kWLe +n  rk+ g++ i+++iFEi+++++Eke
  KHJ31066.1 322 INlEEELDFgldnmcgceggtpigdggigRVEYDMDEQDDKWLETYNIDRKAAGLDIIQREIFEITITKIEKE 394
                 *******99***************************************************************8 PP

>> zf-HC5HC2H  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.0   2.4    0.0099        30      29      65 ..     427     465 ..     411     469 .. 0.81
   2 ?   -4.7   0.6         6   1.8e+04      38      47 ..     490     499 ..     478     503 .. 0.67
   3 !   93.4   5.9   2.5e-30   7.6e-27       1      89 [.     511     606 ..     511     607 .. 0.94

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0099
  zf-HC5HC2H  29 kikkerkklkCylCk....kkvGaciqCskkkCkkafHvtC 65 
                  ++ e+++ +C +C+    +++ a++ C+   C  a H +C
  KHJ31066.1 427 AQAGEEQDSRCAICDdgdcENTNAIVFCDG--CDLAVHQHC 465
                 4556778899*****77776689*****98..********* PP

  == domain 2  score: -4.7 bits;  conditional E-value: 6
  zf-HC5HC2H  38 kCylCkkkvG 47 
                 +C++C +  G
  KHJ31066.1 490 TCIFCPNLDG 499
                 5777766555 PP

  == domain 3  score: 93.4 bits;  conditional E-value: 2.5e-30
  zf-HC5HC2H   1 HvvCalwipevvfeeekeiemeeiedvekikkerkklkCylCkkkvGaciqCskkkCkkafHvtCakeagllleeeeeke.........klksyCkkH 89 
                 H++Ca+wipev + +++   me+++d+ek++k+r+kl+CylC++++GaciqC +k+C +afHvtCa++a+l l+++++++         ++k++C+kH
  KHJ31066.1 511 HLLCAIWIPEVSIGNTS--FMEPVMDIEKVPKTRWKLTCYLCNQRMGACIQCGNKSCYQAFHVTCARRARLFLKMKNNQGtlsllegvtNMKAFCDKH 606
                 99*********997765..5*******************************************************96666899999999********* PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   2.9   6.5e-18   1.9e-14       1      35 [.     448     481 ..     448     482 .. 0.97
   2 ?   -3.2   2.4       2.1   6.4e+03       5      19 ..     558     574 ..     555     576 .. 0.76

  Alignments for each domain:
  == domain 1  score: 52.9 bits;  conditional E-value: 6.5e-18
       PHD_2   1 tnpllsCdkCsvaVHasCYGvskesdgeeWlCrrC 35 
                 tn +++Cd+C +aVH++CYGv+ +++g +WlCr+C
  KHJ31066.1 448 TNAIVFCDGCDLAVHQHCYGVPFIPEG-QWLCRKC 481
                 799************************.******* PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.1
       PHD_2   5 lsCd..kCsvaVHasCY 19 
                 ++C   +C  a+H  C 
  KHJ31066.1 558 IQCGnkSCYQAFHVTCA 574
                 67766689999999885 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   9.8   2.7e-12     8e-09       1      50 [.     436     482 ..     436     483 .. 0.94
   2 !    6.6   5.7    0.0024       7.3       2      30 ..     547     574 ..     546     580 .. 0.86

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 2.7e-12
                 SBTTTTS.TTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTH CS
         PHD   1 rCavCkk.ksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCk 50 
                 rCa+C++ + ++ + +v+CdgC+ ++Hq C+++p      peg+wlC+kC+
  KHJ31066.1 436 RCAICDDgDCENTNAIVFCDGCDLAVHQHCYGVPFI----PEGQWLCRKCQ 482
                 6******99999**********************66....8899******7 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0024
                 BTTTTSTTSTTSCEEEE..TTTSCEEETTTS CS
         PHD   2 CavCkkksdeeeelvqC..dgCkrwfHqkCl 30 
                 C +C++     +  +qC  ++C ++fH++C 
  KHJ31066.1 547 CYLCNQ---RMGACIQCgnKSCYQAFHVTCA 574
                 999*99...69******4446*********7 PP

>> zf-RING-like  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   8.5      0.56   1.7e+03      12      43 .]     452     481 ..     436     481 .. 0.79
   2 ?   13.7   6.9   1.9e-05     0.058       1      30 [.     547     576 ..     547     580 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.56
  zf-RING-like  12 vrCsnesCnvrlHvdCfqhyirthsskkCpkC 43 
                   v C    C  ++H++C+   +  + +  C kC
    KHJ31066.1 452 VFCD--GCDLAVHQHCYGVPFIPEGQWLCRKC 481
                   4577..888*******9988877888888888 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 1.9e-05
  zf-RING-like   1 CeaCkeivtqGvrCsnesCnvrlHvdCfqh 30 
                   C +C++ +  +++C+n+sC +++Hv C+++
    KHJ31066.1 547 CYLCNQRMGACIQCGNKSCYQAFHVTCARR 576
                   99*************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (828 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.70u 0.26s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 5564.30
//
Query:       KHJ31067.1  [L=399]
Description: hypothetical protein EV44_g5587 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00054   18.5   1.1      0.018   13.4   2.2    2.1  2  MAD              Mitotic checkpoint protein
     0.0017   18.2   1.9     0.0017   18.2   1.9    1.7  1  Spc29            Spindle Pole Component 29
      0.003   17.4   2.1     0.0073   16.2   2.1    1.6  1  DUF724           Protein of unknown function (DUF724)
     0.0032   17.5   1.7     0.0097   15.9   0.8    2.2  2  Baculo_PEP_C     Baculovirus polyhedron envelope protein, PEP
     0.0033   17.0   1.2     0.0077   15.8   1.2    1.7  1  PI3K_P85_iSH2    Phosphatidylinositol 3-kinase regulatory sub
     0.0033   16.7   2.8     0.0058   16.0   2.8    1.3  1  DUF3450          Protein of unknown function (DUF3450)
     0.0042   17.3   3.1     0.0087   16.3   3.1    1.5  1  FliJ             Flagellar FliJ protein
     0.0053   16.8   4.4      0.017   15.1   4.4    1.9  1  CENP-F_leu_zip   Leucine-rich repeats of kinetochore protein 
      0.007   15.3   3.8      0.012   14.5   3.8    1.3  1  Spc7             Spc7 kinetochore protein
  ------ inclusion threshold ------
      0.013   15.7   1.9      0.013   15.7   1.9    2.3  2  ATG16            Autophagy protein 16 (ATG16)
      0.015   14.6   0.6      0.023   14.0   0.6    1.3  1  MPS2             Monopolar spindle protein 2
      0.015   15.1   2.3       0.15   11.9   0.1    2.7  2  PKcGMP_CC        Coiled-coil N-terminus of cGMP-dependent pro
      0.017   15.3   3.4        4.4    7.5   1.8    3.1  2  Cnn_1N           Centrosomin N-terminal motif 1
      0.019   15.5   4.2      0.019   15.5   4.2    2.3  2  HIP1_clath_bdg   Clathrin-binding domain of Huntingtin-intera
      0.021   15.2   0.7       0.07   13.6   0.7    1.9  1  KELK             KELK-motif containing domain of MRCK Ser/Thr
      0.034   14.5   1.6      0.077   13.3   1.6    1.5  1  DUF641           Plant protein of unknown function (DUF641)
      0.037   13.3   2.2      0.062   12.5   2.2    1.3  1  TMPIT            TMPIT-like protein
      0.039   13.8   0.6      0.039   13.8   0.6    1.8  1  Sec8_exocyst     Sec8 exocyst complex component specific doma
      0.055   14.2   1.2       0.16   12.7   1.2    1.8  1  Occludin_ELL     Occludin homology domain
       0.06   13.7   1.6        4.6    7.7   1.9    2.9  2  FlaC_arch        Flagella accessory protein C (FlaC)
      0.078   12.5   5.4      0.021   14.4   2.1    1.6  2  CENP-K           Centromere-associated protein K
       0.12   12.7   5.7       0.12   12.6   2.2    2.5  2  BLOC1_2          Biogenesis of lysosome-related organelles co
       0.12   11.7   0.1       0.21   11.0   0.1    1.3  1  DUF1202          Protein of unknown function (DUF1202)
       0.23   11.6   5.1        7.6    6.7   0.0    3.5  2  bZIP_1           bZIP transcription factor
       0.24   10.7   1.3       0.48    9.7   1.3    1.4  1  DUF4407          Domain of unknown function (DUF4407)
       0.33   11.2   3.2       0.89    9.8   0.3    2.6  2  ABC_tran_CTD     ABC transporter C-terminal domain
       0.46   10.6   9.8        0.1   12.7   4.8    2.4  3  ADIP             Afadin- and alpha -actinin-Binding
       0.52   10.4   7.3      0.045   13.8   2.1    2.0  1  BRE1             BRE1 E3 ubiquitin ligase
       0.52   10.8   7.6       0.11   12.9   3.2    2.1  1  Snapin_Pallidin  Snapin/Pallidin
       0.71    9.9   5.8       0.19   11.8   1.8    2.0  2  UPF0242          Uncharacterised protein family (UPF0242) N-t
        1.1    9.3   4.7        3.7    7.5   0.9    2.6  2  Sec20            Sec20
        1.5    8.6   8.1       0.94    9.3   0.8    3.0  3  DivIC            Septum formation initiator
        2.3    8.7   5.3        6.1    7.3   4.3    2.3  2  DUF4094          Domain of unknown function (DUF4094)
        2.4    8.8   5.1         29    5.4   2.3    3.0  3  SlyX             SlyX
        3.1    7.9   7.4        1.7    8.7   0.4    3.2  2  Spc42p           Spindle pole body component Spc42p
        4.8    7.4   8.9       0.53   10.5   3.2    2.5  1  JIP_LZII         JNK-interacting protein  leucine zipper II
        5.1    7.3  13.4       0.44   10.7   3.5    3.0  2  HR1              Hr1 repeat
        5.5    6.5   9.6         13    5.3   9.6    1.7  1  Exonuc_VII_L     Exonuclease VII, large subunit
        5.6    7.5  12.5         15    6.1   0.0    3.8  3  ZapB             Cell division protein ZapB
        6.7    7.2  12.4        2.3    8.6   5.3    2.6  2  Syntaxin_2       Syntaxin-like protein
        6.7    7.5   9.3        6.7    7.5   1.8    2.7  2  FliD_N           Flagellar hook-associated protein 2 N-termin
        6.8    6.8  11.3       0.93    9.5   5.2    2.7  3  TMF_DNA_bd       TATA element modulatory factor 1 DNA binding


Domain annotation for each model (and alignments):
>> MAD  Mitotic checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   2.2   4.3e-05     0.018     102     195 ..     132     222 ..     126     251 .. 0.81
   2 ?    1.6   0.0      0.17        71     482     526 ..     341     387 ..     334     395 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.3e-05
         MAD 102 arevisalknelaelkrqiekqelelsekeseleelqerldllkkklseleqliqqlekkqkelaeaeqrikeLefeiqsqeddslivknskse 195
                 ++++  + ++ l++l++   +  ++l+  ++   +l e+l++ ++++++l   ++qle+   + + ++qri eLe+e+ s +++    k+s ++
  KHJ31067.1 132 IKDLLVSAEGLLSRLQNAYVQRTSALNDMTKSRDNLVEELEESNTRVQNL---RSQLETLATTISSKDQRIAELERELLSAKSNPCYYKSSLNK 222
                 66777777888999999999999999999999999999999999999986...56777778888999***********9977766666655554 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.17
         MAD 482 lkktkVlhlseNPaakakqqkk..eqlekLqaEierlkellkkleed 526
                  k++  l+ ++ P    k + +  + +  LqaE+++lk ++ +le++
  KHJ31067.1 341 NKDVHTLQQESCPSCLGKGSLAawDTVSLLQAENQGLKGRIVQLEDA 387
                 55555566666665554444331267889**********99999975 PP

>> Spc29  Spindle Pole Component 29
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   1.9   4.1e-06    0.0017     105     181 ..     150     240 ..     138     258 .. 0.89

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 4.1e-06
       Spc29 105 desrldsiyssvkkivelekklddqkleIkeLkreleqqrtvnseLqekvaeleeev..............krlaalehSnrkfrsyssap 181
                   +r   + + +k+ ++l   l++ + ++++L+ +le+  t +s   +++aele+e+              ++ + l++Sn   +syss+ 
  KHJ31067.1 150 YVQRTSALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERELlsaksnpcyyksslNKCHKLQNSNSLSQSYSSID 240
                 45566677788888888999************************************************9999999*************986 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   2.1   1.7e-05    0.0073      93     173 ..     153     242 ..     148     249 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.7e-05
      DUF724  93 rlnkLlslkdeqtklleerkklekkieeeesekrkleeeidelekkilelerqlallk.........ekkeaadkeiarlkseaekleee 173
                 r + L  + +++++l ee+++ + ++++ +s+ + l + i+ ++++i+eler+l ++k          +k ++ ++  +l+++ +++++e
  KHJ31067.1 153 RTSALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERELLSAKsnpcyykssLNKCHKLQNSNSLSQSYSSIDHE 242
                 56677789999***********************************************88877755544444444444555555555555 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.8   2.3e-05    0.0097      59     126 ..     140     210 ..     120     217 .. 0.79
   2 ?   -1.5   0.0       5.5   2.4e+03      66      90 ..     371     395 ..     360     397 .. 0.58

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 2.3e-05
  Baculo_PEP_C  59 aeldtrldtlltnLtdalnalq...dtlrneLtnlnsiltnLlssvtNinstLnnllqalnnldlgalsqe 126
                   + l +rl+++  + t+aln ++   d+l +eL+  n+ + nL s++  + +t+++  q ++ l+ + ls++
    KHJ31067.1 140 EGLLSRLQNAYVQRTSALNDMTksrDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERELLSAK 210
                   23334777777777778888878889****************************99888888888877765 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 5.5
  Baculo_PEP_C  66 dtlltnLtdalnalqdtlrneLtnl 90 
                   ++  + L+  + +l+d+++ +L+++
    KHJ31067.1 371 QAENQGLKGRIVQLEDAVSGALDAI 395
                   4444445555666666666555554 PP

>> PI3K_P85_iSH2  Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   1.2   1.8e-05    0.0077      81     131 ..     162     212 ..     131     240 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.8e-05
  PI3K_P85_iSH2  81 hEieklqenleqlksrlkelhsskekLeedlkqqkeeereleReinalkpe 131
                    +  ++l e le+ + r+++l+s+ e L   + ++ ++  eleRe+ ++k++
     KHJ31067.1 162 KSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERELLSAKSN 212
                    5667999******************************************86 PP

>> DUF3450  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   2.8   1.4e-05    0.0058      20      90 ..     138     208 ..     126     212 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.4e-05
     DUF3450  20 qalkeaekavaaaaqsqkkidklddekqellaeyralkeeleslevyneqlerlvasqeqeiasleeqiee 90 
                 +a+   ++ ++a  q  +  +++++ +++l++e+++ ++++++l+ + e l+  ++s +q+ia+le+++ +
  KHJ31067.1 138 SAEGLLSRLQNAYVQRTSALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERELLS 208
                 55566667777788888999**********************************************99865 PP

>> FliJ  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   3.1     2e-05    0.0087       3      82 ..     139     213 ..     138     235 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2e-05
        FliJ   3 aareLaeaqrelqqaeekleeleqyrqeyqkqlsgeaqglsaaelrnyqafisaldeaiaqqkqelaqaekqvekareew 82 
                 a+  L + q+++ q  + l+ +++ r+++ ++l+++       + +n+++++++l ++i++  q +a +e+++  a+++ 
  KHJ31067.1 139 AEGLLSRLQNAYVQRTSALNDMTKSRDNLVEELEESN-----TRVQNLRSQLETLATTISSKDQRIAELERELLSAKSNP 213
                 67789999*****************************.....******************************99888775 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   4.4   4.1e-05     0.017      69     124 ..     151     206 ..     135     212 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 4.1e-05
  CENP-F_leu_zip  69 releldLvalrsekeeLekelqkkqervseLeslnsslenlleekEqekvqmkees 124
                      + ++ L+++++ +++L +el++++ rv++L s  ++l  +++ k q  ++++ e 
      KHJ31067.1 151 VQRTSALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELEREL 206
                     55667788888888888888888888888888888888888888888877777664 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   3.8   2.8e-05     0.012     157     241 ..     135     218 ..     132     241 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.8e-05
        Spc7 157 lLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelke 241
                 lL + e +l++l ++++++ ++l++  ++  + +eele++ ++++++lr++l++l ++i++k +++ael+++l + +++    k+
  KHJ31067.1 135 LLVSAEGLLSRLQNAYVQRTSALNDMTKSRDNLVEELEES-NTRVQNLRSQLETLATTISSKDQRIAELERELLSAKSNPCYYKS 218
                 68888999999999**********9999999999999985.689***************************99777766555555 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       5.7   2.4e+03      28      32 ..      19      23 ..       7      70 .. 0.49
   2 ?   15.7   1.9   3.2e-05     0.013      98     180 ..     151     205 ..      87     211 .. 0.65

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 5.7
       ATG16 28 ldrts 32
                l+r +
  KHJ31067.1 19 LNRLK 23
                33322 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 3.2e-05
       ATG16  98 gelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnqaEeklrklekE 180
                  + ++ l++++++ + l e+                            l+e ++ vq+l+  l++L  + ++ +++  +le+E
  KHJ31067.1 151 VQRTSALNDMTKSRDNLVEE----------------------------LEESNTRVQNLRSQLETLATTISSKDQRIAELERE 205
                 34444455555555555555............................55555555555555555555555555555555544 PP

>> MPS2  Monopolar spindle protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.6   5.4e-05     0.023     145     213 ..     164     229 ..     118     262 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 5.4e-05
        MPS2 145 kqesPeklrrsnrklkaLevrveslkdELeakdevlrekeRelleLkkrlseykekYellqrefslyka 213
                 +++  e+l  sn ++++L  ++e l   ++ kd+ ++e eRell  k++   yk    +l++ ++l+  
  KHJ31067.1 164 RDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERELLSAKSNPCYYKS---SLNKCHKLQNS 229
                 33445677889*********************************99998888874...34444444444 PP

>> PKcGMP_CC  Coiled-coil N-terminus of cGMP-dependent protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.3      0.51   2.2e+02      16      31 ..     170     185 ..     166     186 .. 0.80
   2 ?   11.9   0.1   0.00036      0.15       3      17 ..     192     206 ..     190     210 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.51
   PKcGMP_CC  16 rlaekdeEIqELrskL 31 
                  l+e    +q Lrs+L
  KHJ31067.1 170 ELEESNTRVQNLRSQL 185
                 567777789******9 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00036
   PKcGMP_CC   3 lllKDERIRELEkrl 17 
                 +++KD RI+ELE+ l
  KHJ31067.1 192 ISSKDQRIAELEREL 206
                 789*********987 PP

>> Cnn_1N  Centrosomin N-terminal motif 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   1.8      0.01       4.4      33      68 ..     160     194 ..     146     211 .. 0.60
   2 ?    5.7   0.0      0.04        17       9      31 ..     367     389 ..     365     393 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.01
      Cnn_1N  33 lseeqkeellkenielkveveslqkelkekkkllre 68 
                 +++ ++++l++e+ e  ++v++l+ +l+++   + +
  KHJ31067.1 160 MTK-SRDNLVEELEESNTRVQNLRSQLETLATTISS 194
                 333.56666666666666666666666655444433 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.04
      Cnn_1N   9 idkLkKENFdLKLriyfLeerle 31 
                 ++ L+ EN +LK ri  Le+++ 
  KHJ31067.1 367 VSLLQAENQGLKGRIVQLEDAVS 389
                 567999*************9875 PP

>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1       8.4   3.6e+03      49      79 ..      14      45 ..       5      52 .. 0.57
   2 ?   15.5   4.2   4.6e-05     0.019      27      95 ..     137     205 ..     127     212 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 8.4
  HIP1_clath_bdg 49 eqkeelekLkrelea.kraelarlkssLesse 79
                    e ++ l++Lk e ++ + +++a+ ++sL+s +
      KHJ31067.1 14 ENNTLLNRLKYERTKlTLTKFASSNKSLQSAN 45
                    55555566665544313345555555555554 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 4.6e-05
  HIP1_clath_bdg  27 rekkeleeelerlkeeaerkleeqkeelekLkreleakraelarlkssLesseqsgeqlssqlaaLqaE 95 
                        + l  +l+++  ++++ l++ ++  ++L +ele++++++++l+s Le+ +++ +   +++a+L++E
      KHJ31067.1 137 VSAEGLLSRLQNAYVQRTSALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERE 205
                     556677889999999***************************************************998 PP

>> KELK  KELK-motif containing domain of MRCK Ser/Thr protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.7   0.00016      0.07      32      74 ..     152     194 ..     141     203 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 0.00016
        KELK  32 sqkkeLkdaisqrklamqefsevneklselrsqkqklsRqlrd 74 
                 ++++ L d ++ r+  ++e++e n ++++lrsq + l+  +  
  KHJ31067.1 152 QRTSALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTISS 194
                 677889***************************9998766555 PP

>> DUF641  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.6   0.00018     0.077      47     120 ..     137     211 ..     133     217 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.00018
      DUF641  47 vseLkklselkrlyrkkqkkkas.eaeeseleaeiqeqrsllktyeitvkkleaelkakdseieeLkekLeeaek 120
                 vs    ls+l++ y+++ ++ +  ++++ +l  e++e    ++ +   ++ l + +++kd+ i eL+++L +a++
  KHJ31067.1 137 VSAEGLLSRLQNAYVQRTSALNDmTKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERELLSAKS 211
                 5555679********987765544589999999*************************************98876 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   2.2   0.00014     0.062      12      83 ..     144     214 ..     137     233 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00014
       TMPIT  12 keleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvkeeeeeeveelkeelkerkkvlk 83 
                  +l+++  + ++ l++++k+ +++++e+++ + r+++l+s+l++l ++++ +++++++el++el ++k++  
  KHJ31067.1 144 SRLQNAYVQRTSALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTIS-SKDQRIAELERELLSAKSNPC 214
                 5688888888999*********************************9985.778889999999998887655 PP

>> Sec8_exocyst  Sec8 exocyst complex component specific domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.6   9.1e-05     0.039      54     115 ..     144     205 ..     116     212 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 9.1e-05
  Sec8_exocyst  54 eaLqevvnehhqaFnssiasYskilssiqesqekvselKesleeakkklstkkkeLkelnar 115
                   + Lq++  +   a n+  +s  ++++ ++es+++v++l+ +le   + +s k++ + el+ +
    KHJ31067.1 144 SRLQNAYVQRTSALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERE 205
                   56777777777888888899999999999999999999999999999999999999999876 PP

>> Occludin_ELL  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.2   0.00038      0.16      26      87 ..     166     228 ..     157     233 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00038
  Occludin_ELL  26 elhaeleevskkfseLerelkelkegskeykkieeeilqeykklkkdpeyq.ekkkrceyLke 87 
                   +l +elee + ++++L+++l++l+++ +  +++++e+ +e+ + k++p y  +  ++c++L++
    KHJ31067.1 166 NLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERELLSAKSNPCYYkSSLNKCHKLQN 228
                   57899***********************888888889*********99865156789999876 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   1.9     0.011       4.6       3      40 ..     165     202 ..     164     212 .. 0.85
   2 ?    2.4   0.0      0.49   2.1e+02      15      38 ..     366     389 ..     359     399 .] 0.84

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.011
   FlaC_arch   3 delEnklsklsteletvkkeneelsksveelkenVkdl 40 
                 d+l ++l++  t+++++++++e l +++   ++++ +l
  KHJ31067.1 165 DNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAEL 202
                 567789999*******************9999999443 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.49
   FlaC_arch  15 eletvkkeneelsksveelkenVk 38 
                 +++ +++en+ l+  + +l++ V 
  KHJ31067.1 366 TVSLLQAENQGLKGRIVQLEDAVS 389
                 57889***************9994 PP

>> CENP-K  Centromere-associated protein K
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       7.9   3.4e+03      19     131 ..      15      42 ..       4      53 .. 0.48
   2 ?   14.4   2.1   4.9e-05     0.021      81     146 ..     171     235 ..     132     252 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 7.9
      CENP-K  19 ceelwkeleecqskLsllgtetlvesdaqlslliarvklLtaeleqwekktpeiislneevllalgkeelqklksqLelvlsiiqsknkklkedLkrEq 117
                  + l+++l+  + kL+l                                                                                  
  KHJ31067.1  15 NNTLLNRLKYERTKLTL---------------------------------------------------------------------------------- 31 
                 33333333333333333.................................................................................. PP

      CENP-K 118 ewleeqqeilesLk 131
                     ++ +  +sL+
  KHJ31067.1  32 ---TKFASSNKSLQ 42 
                 ...34444444444 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 4.9e-05
      CENP-K  81 lalgkeelqklksqLelvlsiiqsknkklkedLkrEqewleeqqeilesLkektkelkkqvvafse 146
                 l+ +++++q l+sqLe +  +i sk ++++e L+rE    + +    +s  +k+++l++ ++  ++
  KHJ31067.1 171 LEESNTRVQNLRSQLETLATTISSKDQRIAE-LERELLSAKSNPCYYKSSLNKCHKLQNSNSLSQS 235
                 344667899*******************975.**********999999999999999987665444 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.2   0.00029      0.12      31      93 ..     149     204 ..     137     206 .. 0.57
   2 ?   -0.2   0.0       2.9   1.2e+03      21      45 ..     366     390 ..     355     396 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00029
     BLOC1_2  31 aasekykklkdvaaslekkleklnekyeelqpylqqidqiekqvteLeeavseLDeyskeLEa 93 
                 a  ++       ++ l++  +  +++ eel++  ++++++  q+++L +++s  D+ + eLE 
  KHJ31067.1 149 AYVQR-------TSALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELER 204
                 44444.......444455555555555566666666666666666666666666666666664 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 2.9
     BLOC1_2  21 dyklLeklNeaasekykklkdvaas 45 
                  ++lL++ N+    ++ +l+d++++
  KHJ31067.1 366 TVSLLQAENQGLKGRIVQLEDAVSG 390
                 5678888888888888888877766 PP

>> DUF1202  Protein of unknown function (DUF1202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   0.00049      0.21     107     179 ..     146     218 ..     141     243 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00049
     DUF1202 107 lqaaasdrgrvvddiktndkylivnsedfnyrfsqleaalraqkasipalekelkaldkkivvakkeadaywg 179
                 lq a  +r  +++d+      l+ + e+ n r  +l + l++  ++i + ++++  l++++  ak +   y  
  KHJ31067.1 146 LQNAYVQRTSALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERELLSAKSNPCYYKS 218
                 79999999*******99999******************************************99987655554 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   1.2     0.096        41      25      50 ..     168     193 ..     153     207 .. 0.53
   2 ?    6.7   0.0     0.018       7.6      35      57 ..     367     389 ..     364     396 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.096
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  25 qaeieeLerrvkaLekeNksLksele 50 
                  +e ee  +rv+ L ++ ++L+ +++
  KHJ31067.1 168 VEELEESNTRVQNLRSQLETLATTIS 193
                 33333334444444444444444444 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.018
                 HHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  35 vkaLekeNksLkseleelkkeve 57 
                 v+ L++eN+ Lk ++ +l++ v+
  KHJ31067.1 367 VSLLQAENQGLKGRIVQLEDAVS 389
                 889****************9987 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.3    0.0011      0.48     112     169 ..     146     212 ..     138     236 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0011
     DUF4407 112 laeeqqeeakelkeqlaaa.........ltaelaeleaqiaalqaeidaaearldalraeaqkeldg 169
                 l+  + +++++l++ +++          +++++++l++q++ l ++i+++++r+++l++e+ +  ++
  KHJ31067.1 146 LQNAYVQRTSALNDMTKSRdnlveeleeSNTRVQNLRSQLETLATTISSKDQRIAELERELLSAKSN 212
                 5555666666666666666777777888999**************************9998776665 PP

>> ABC_tran_CTD  ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1       1.2     5e+02      34      62 ..     148     176 ..     139     183 .. 0.76
   2 ?    9.8   0.3    0.0021      0.89       7      40 ..     182     213 ..     178     231 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 1.2
  ABC_tran_CTD  34 pelysdpeklaelsaeleeleaeLeelye 62 
                   +++ ++  +l++ ++  ++l +eLee   
    KHJ31067.1 148 NAYVQRTSALNDMTKSRDNLVEELEESNT 176
                   44557778899999999999999998655 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.0021
  ABC_tran_CTD   7 qreleeleaeIeaLEeeiaeleaeladpelysdp 40 
                   + +le+l  +I + +++iaele el ++   s+p
    KHJ31067.1 182 RSQLETLATTISSKDQRIAELERELLSAK--SNP 213
                   6789*******************997766..444 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.3       9.2   3.9e+03      79     101 ..      22      45 ..       9      54 .. 0.44
   2 ?   12.7   4.8   0.00024       0.1      39      96 ..     155     212 ..     132     235 .. 0.87
   3 ?   -1.7   0.0       6.3   2.7e+03      61      83 ..     366     388 ..     362     392 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 9.2
        ADIP  79 lk.tqleqlerelalvqakerqle 101
                 lk ++++ + ++ a++++ +++++
  KHJ31067.1  22 LKyERTKLTLTKFASSNKSLQSAN 45 
                 332222222333333333333333 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00024
        ADIP  39 nviysLlqardrdleqreslnetirkleaeierlqskierlktqleqlerelalvqak 96 
                   ++++ ++rd   e+ e++n+++++l++ +e l ++i++ +++ ++lerel +++++
  KHJ31067.1 155 SALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERELLSAKSN 212
                 5679999999999**************************************9877765 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 6.3
        ADIP  61 tirkleaeierlqskierlktql 83 
                 t++ l+ae++ l+ +i +l++ +
  KHJ31067.1 366 TVSLLQAENQGLKGRIVQLEDAV 388
                 56667888888888888887655 PP

>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   2.1    0.0001     0.045       3      70 ..     155     222 ..     153     240 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 0.0001
        BRE1   3 kELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsK 70 
                 + L +++k +++l e+l++  + +++l +++  l + ++  dq + +++r+  + +      +++l+K
  KHJ31067.1 155 SALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERELLSAKSNPCYYKSSLNK 222
                 56999*********************************************876666655555555555 PP

>> Snapin_Pallidin  Snapin/Pallidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   3.2   0.00027      0.11       4      74 ..     139     208 ..     138     212 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00027
  Snapin_Pallidin   4 aegllellepkldeldeklkelrqsQeeLleqldrlnekLkeleeaqeaevlpdlkeyakKLvnikkrmss 74 
                      aegll+ l+ +  + ++ l++ ++s + L e+l++ n+++++l+   e  + +++ +  ++++++++++ s
       KHJ31067.1 139 AEGLLSRLQNAYVQRTSALNDMTKSRDNLVEELEESNTRVQNLRSQLE-TLATTISSKDQRIAELERELLS 208
                      79***************************************9998777.8999999999999999998766 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1         6   2.5e+03     103     127 ..      22      46 ..       7      62 .. 0.59
   2 ?   11.8   1.8   0.00044      0.19     125     177 ..     152     204 ..     133     208 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 6
     UPF0242 103 eeldakeeelerlkeenqqLqekle 127
                  +++  + +l +    n++Lq+  +
  KHJ31067.1  22 LKYERTKLTLTKFASSNKSLQSANQ 46 
                 2355555555666666666665444 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00044
     UPF0242 125 kleaiaedfeelkleleeqLaekqellqeyqetieeqrsvlekrqdqieqLes 177
                 +   + +d+ +++ +l e+L+e ++++q+++ ++e +  ++ +++++i++Le 
  KHJ31067.1 152 QRTSALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELER 204
                 44455669999999999999999999999999999999999999999999985 PP

>> Sec20  Sec20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.2      0.28   1.2e+02      21      47 ..      24      50 ..       3      58 .. 0.81
   2 ?    7.5   0.9    0.0087       3.7       8      41 ..     158     191 ..     134     210 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.28
       Sec20 21 vqqSeenleeldastkslekleeeykq 47
                 ++ +++l ++ +s ksl+++++++  
  KHJ31067.1 24 YERTKLTLTKFASSNKSLQSANQNFRR 50
                478899****************99975 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0087
       Sec20   8 eslraisqllsqevqqSeenleeldastkslekl 41 
                 + + +++  l++e ++S+  +++l+++ ++l ++
  KHJ31067.1 158 NDMTKSRDNLVEELEESNTRVQNLRSQLETLATT 191
                 6788888888888888888888888888887654 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.3      0.63   2.7e+02      17      46 ..     155     184 ..     143     188 .. 0.47
   2 ?    9.3   0.8    0.0022      0.94      16      54 ..     175     213 ..     171     217 .. 0.86
   3 ?    2.9   0.0      0.22        94      29      46 ..     370     387 ..     365     391 .. 0.61

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.63
                 XHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       DivIC  17 laykqlkqeiaalqaelaklkaeneeLeae 46 
                 +a+ ++ + ++ l +el++ + + ++L ++
  KHJ31067.1 155 SALNDMTKSRDNLVEELEESNTRVQNLRSQ 184
                 334444444444444555555555544444 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0022
                 XXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXXX CS
       DivIC  16 llaykqlkqeiaalqaelaklkaeneeLeaevkdLksde 54 
                   +++ l++++++l  ++ ++ ++++eLe+e+   ks++
  KHJ31067.1 175 NTRVQNLRSQLETLATTISSKDQRIAELERELLSAKSNP 213
                 568899************************987776665 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.22
                 HHHHHHHHHHHHHHHHHH CS
       DivIC  29 lqaelaklkaeneeLeae 46 
                 lqae++ lk ++ +Le+ 
  KHJ31067.1 370 LQAENQGLKGRIVQLEDA 387
                 566666666666666654 PP

>> DUF4094  Domain of unknown function (DUF4094)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       9.6   4.1e+03      17      30 ..      72      87 ..      57     139 .. 0.61
   2 ?    7.3   4.3     0.014       6.1      51      87 ..     162     211 ..     128     212 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 9.6
     DUF4094 17 llftnRlwtvp.s.di 30
                ++f nRl  +  + ++
  KHJ31067.1 72 ICFGNRLLGMAgKfNT 87
                4555555544433322 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.014
     DUF4094  51 esrskdilgevskthkaiqtL..............dktissLemeLaaara 87 
                 +sr  ++++e ++ ++ +q+L              d++i++Le eL +a++
  KHJ31067.1 162 KSR-DNLVEELEESNTRVQNLrsqletlattisskDQRIAELERELLSAKS 211
                 222.3555567777777776666666668888888************9998 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.3       1.2   5.3e+02      16      52 ..     140     176 ..     136     182 .. 0.80
   2 ?    5.4   2.3     0.068        29       5      40 ..     171     206 ..     165     212 .. 0.81
   3 ?    2.1   0.0      0.73   3.1e+02      29      55 ..     363     389 ..     356     394 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXX CS
        SlyX  16 edtieeLndvvaeqqqqidrlqrqlrllaerlkelee 52 
                 e ++ +L+++ ++    +  +++  + l+e+l+e ++
  KHJ31067.1 140 EGLLSRLQNAYVQRTSALNDMTKSRDNLVEELEESNT 176
                 6678889999999999999999999999999987665 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.068
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        SlyX   5 leeLEiklafqedtieeLndvvaeqqqqidrlqrql 40 
                 lee  +++  +  ++e+L  ++   +q+i++l+r+l
  KHJ31067.1 171 LEESNTRVQNLRSQLETLATTISSKDQRIAELEREL 206
                 44444788889999*******************998 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.73
                 HHHHHHHHHHHHHHHHHT-XXXXXXXX CS
        SlyX  29 qqqqidrlqrqlrllaerlkeleessg 55 
                  +++++ lq++ + l+ r+ +le++ +
  KHJ31067.1 363 AWDTVSLLQAENQGLKGRIVQLEDAVS 389
                 6889999************99998765 PP

>> Spc42p  Spindle pole body component Spc42p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.4     0.004       1.7      32      61 ..      26      57 ..      10      70 .. 0.75
   2 ?    0.9   1.7       1.1   4.7e+02      20      36 ..     170     186 ..     148     252 .. 0.65

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.004
      Spc42p 32 RaK..LiKYtelnkKLedqlenlersssslek 61
                R K  L+K++  nk L++ ++n++rs +s + 
  KHJ31067.1 26 RTKltLTKFASSNKSLQSANQNFRRSPESPNL 57
                5662268*******************999875 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 1.1
      Spc42p  20 EierLnvlvgslRaKLi 36 
                 E+e+ n  v +lR+ L+
  KHJ31067.1 170 ELEESNTRVQNLRSQLE 186
                 55555555555555543 PP

>> JIP_LZII  JNK-interacting protein  leucine zipper II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   3.2    0.0013      0.53      27      70 ..     163     206 ..     148     207 .. 0.93

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.0013
    JIP_LZII  27 vkddLIarvdeLtsereiLreEleslqkakerlesrikelEeel 70 
                  +d+L+++++e +++ + Lr+ le+l ++ ++  +ri+elE el
  KHJ31067.1 163 SRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELEREL 206
                 5899**************************************98 PP

>> HR1  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   3.5     0.001      0.44      32      61 ..     159     188 ..     138     195 .. 0.78
   2 ?    3.7   0.4      0.16        68      39      61 ..     187     209 ..     186     213 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.001
         HR1  32 qnkkvrqeaeselsesnskielLreqLeel 61 
                 +  k+r     el+esn++++ Lr+qLe+l
  KHJ31067.1 159 DMTKSRDNLVEELEESNTRVQNLRSQLETL 188
                 44568888899*****************98 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.16
         HR1  39 eaeselsesnskielLreqLeel 61 
                 + ++++s+ +++i++L+++L   
  KHJ31067.1 187 TLATTISSKDQRIAELERELLSA 209
                 678899*************9765 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   9.6      0.03        13     172     271 ..     144     238 ..       4     263 .. 0.67

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.03
  Exonuc_VII_L 172 eklasrlkspeellerkrqrldeleerleralkkqlkkkrerleelkerlkekleekkerlkklkerlelleekkerleeleeklealsplkvLkrG 268
                   ++l++++ + ++ l++ +++ d+l e+le+  ++++++ r++le+l+    +++++k++r+++l+++l +++++   +++  +k ++l+ ++ L++ 
    KHJ31067.1 144 SRLQNAYVQRTSALNDMTKSRDNLVEELEE-SNTRVQNLRSQLETLA----TTISSKDQRIAELERELLSAKSNPCYYKSSLNKCHKLQNSNSLSQS 235
                   333333333333333333333333333333.3333333333333333....3333344444444333333333333344444444444444444444 PP

  Exonuc_VII_L 269 yai 271
                   y+ 
    KHJ31067.1 236 YSS 238
                   443 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.5       0.7     3e+02      24      56 ..      21      53 ..      10      62 .. 0.78
   2 ?    1.3   5.2       1.1   4.7e+02      24      64 ..     161     201 ..     141     227 .. 0.58
   3 ?    6.1   0.0     0.036        15      16      39 ..     363     386 ..     361     395 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.7
        ZapB 24 qmeieeLkeeneelkeenreleeeneqlkeere 56
                + ++e+ k    + ++ n+ l++ n++++  +e
  KHJ31067.1 21 RLKYERTKLTLTKFASSNKSLQSANQNFRRSPE 53
                557888888889999999999999999997766 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 1.1
        ZapB  24 qmeieeLkeeneelkeenreleeeneqlkeereawqerlkk 64 
                  +  + L ee ee + + ++l++++e l ++ ++  +r+  
  KHJ31067.1 161 TKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAE 201
                 55555555555555555555555555555555554444443 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.036
        ZapB  16 aidtitlLqmeieeLkeeneelke 39 
                 a dt++lLq e++ Lk +  +l++
  KHJ31067.1 363 AWDTVSLLQAENQGLKGRIVQLED 386
                 669*************99888876 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.6      0.51   2.2e+02      50      94 ..       4      49 ..       2      54 .. 0.84
   2 ?    8.6   5.3    0.0054       2.3      11      75 ..     142     207 ..     132     231 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.51
  Syntaxin_2 50 nellkklsqldnsssdsqqklqkekLk.kdfkealqeFqkiqrqya 94
                ++++  l+ ++n+++ ++ k+++ kL+ ++f ++ +++q++ ++++
  KHJ31067.1  4 TANIDTLMIDENNTLLNRLKYERTKLTlTKFASSNKSLQSANQNFR 49
                6788999999999998899999999975899999999999988876 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0054
  Syntaxin_2  11 nvstleklvkq.LgtkkdteelreklhelieeinelikktnellkklsqldnsssdsqqklqkekL 75 
                 ++s l++   q  +  +d ++ r++l e  ee n+ +++  ++l+ l++ + s++++   l++e L
  KHJ31067.1 142 LLSRLQNAYVQrTSALNDMTKSRDNLVEELEESNTRVQNLRSQLETLATTISSKDQRIAELERELL 207
                 556666554442555599*******************************99999766444455544 PP

>> FliD_N  Flagellar hook-associated protein 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   1.0      0.22        95      10      66 ..       8      70 ..       2      96 .. 0.63
   2 ?    7.5   1.8     0.016       6.7       6      69 ..     140     196 ..     137     242 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.22
                XXXXXXXXX.XXXX..XXXXXXXXXXXHHHHHHHHHHHHHHHHHHH..HHXX.GGGGGXEEEE CS
      FliD_N 10 kqlmkaera.kldk..leqkktklewkqsayrelnsklsnlksals..alsk.sstfsakkat 66
                + lm  e++  l++  +e+ k +l++  s  ++l+s+ +n++ + +  +l   +++fs+++ +
  KHJ31067.1  8 DTLMIDENNtLLNRlkYERTKLTLTKFASSNKSLQSANQNFRRSPEspNLLLsQNSFSNTSIS 70
                556655665345553355555566666677778888888888844345553337777544433 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.016
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXHHHHHHHHHHHHHHHHHHHHHXXGGGGGXEEEEECS CS
      FliD_N   6 dslvkqlmkaerakldkleqkktklewkqsayrelnsklsnlksalsalsksstfsakkatssd 69 
                 + l++ l +a+ ++   l+   ++ ++  ++++e n+ ++nl+s+l++l  ++t+     +s+d
  KHJ31067.1 140 EGLLSRLQNAYVQRTSALNDMTKSRDNLVEELEESNTRVQNLRSQLETL--ATTI-----SSKD 196
                 5677888899999999999888888888899999999999999966544..2233.....2222 PP

>> TMF_DNA_bd  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.3       6.6   2.8e+03      47      68 ..      24      46 ..      12      51 .. 0.54
   2 ?    4.4   0.8     0.088        38      41      71 ..     156     186 ..     144     188 .. 0.83
   3 ?    9.5   5.2    0.0022      0.93      29      67 ..     172     210 ..     160     212 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 6.6
  TMF_DNA_bd 47 keikelk.kkleklekeleelee 68
                +e ++l+  k ++++k+l++ ++
  KHJ31067.1 24 YERTKLTlTKFASSNKSLQSANQ 46
                34444434555666666665555 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.088
  TMF_DNA_bd  41 knkelekeikelkkkleklekeleeleerlk 71 
                  +++++k+ ++l ++le+++  +++l++ l+
  KHJ31067.1 156 ALNDMTKSRDNLVEELEESNTRVQNLRSQLE 186
                 5678889999999999999999999988876 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.0022
  TMF_DNA_bd  29 lklnntikkLrkknkelekeikelkkkleklekeleele 67 
                  + n+ + +Lr++++ l ++i++ ++++++le+el + +
  KHJ31067.1 172 EESNTRVQNLRSQLETLATTISSKDQRIAELERELLSAK 210
                 4567779***************************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1510  (0.0842211); expected 358.6 (0.02)
Passed bias filter:                      858  (0.0478554); expected 358.6 (0.02)
Passed Vit filter:                       179  (0.00998383); expected 17.9 (0.001)
Passed Fwd filter:                        44  (0.00245412); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              42  [number of targets reported over threshold]
# CPU time: 0.70u 0.30s 00:00:01.00 Elapsed: 00:00:00.45
# Mc/sec: 2642.11
//
Query:       KHJ31068.1  [L=312]
Description: hypothetical protein EV44_g5487 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.017   15.8   0.0      0.038   14.6   0.0    1.6  1  Asp_protease_2   Aspartyl protease
      0.032   14.8   0.0       0.12   13.0   0.0    1.9  2  gag-asp_proteas  gag-polyprotein putative aspartyl protease


Domain annotation for each model (and alignments):
>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   4.2e-06     0.038      12      90 .]     190     275 ..     185     275 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 4.2e-06
  Asp_protease_2  12 fllDTGasttlispelaeklglkvreseltvrvsgaggevkarlvrlds.....lklggltlknvpalvldlgeeid..glLGmdf 90 
                     ++ D G++ +lisp+l++ l+l++ +++ ++      g+  ++ +r+ +     +  gg+t + ++++  d+g + d  +lLG+++
      KHJ31068.1 190 VCADQGSDLVLISPQLVRILRLEKNTLSSPQNQVITMGTADGASHRITEwvsfvFVSGGITRHVHAFVRPDKGMTNDlfLLLGLPW 275
                     689*******************9999998888777788888888888876666555599999998888888887777667788765 PP

>> gag-asp_proteas  gag-polyprotein putative aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.67     6e+03      21      59 ..      58      96 ..      56     107 .. 0.61
   2 ?   13.0   0.0   1.3e-05      0.12      14      90 ..     192     276 ..     183     278 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.67
                     -EEEHHHHHHTTGGGGEB..TT--EE-TTSTT-EEEEEE CS
  gag-asp_proteas 21 tiiseelaerlglsrkedkgkvevktangeveakrvrld 59
                     t+++++++e  + s++  k +++++t   e+++k+++++
       KHJ31068.1 58 TMVTMSMMELYQASPDFAKCSRKYSTRINEKRVKKGKIA 96
                     556666666666666655566666666666666555554 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 1.3e-05
                      EETT-SS-EEEHHHHHHTTGGGGEB..TT--EE-TTSTT-EEEEEEE....EEE.EETTEEEEEEEEEESSSSE....EEEHHHH CS
  gag-asp_proteas  14 vDTGAsstiiseelaerlglsrkedkgkvevktangeveakrvrlds....vkiggielrnvsavvlegelddl....LLGldfL 90 
                       D G + ++is++l++ l+l++++  ++++  +  g++ ++ +r+ +    v + g  +r+v+a v +++ ++     LLGl +L
       KHJ31068.1 192 ADQGSDLVLISPQLVRILRLEKNTLSSPQNQVITMGTADGASHRITEwvsfVFVSGGITRHVHAFVRPDKGMTNdlflLLGLPWL 276
                      588999***************9999988777666666666555544322226777777888******999644444789**9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2267.98
//
Query:       KHJ31069.1  [L=218]
Description: putative superoxide dismutase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-32  111.2   0.5    3.8e-32  110.5   0.2    1.5  2  Sod_Fe_C  Iron/manganese superoxide dismutases, C-terminal do
    2.8e-32  111.0   2.4    5.1e-32  110.2   2.4    1.4  1  Sod_Fe_N  Iron/manganese superoxide dismutases, alpha-hairpin


Domain annotation for each model (and alignments):
>> Sod_Fe_C  Iron/manganese superoxide dismutases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0         1   9.4e+03      80      92 ..      33      45 ..      28      58 .. 0.60
   2 !  110.5   0.2   4.3e-36   3.8e-32       4     102 .]     101     199 ..      98     199 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1
                TT-HHHHHHHHGG CS
    Sod_Fe_C 80 qnkradYieafwn 92
                 ++ + Y++++ n
  KHJ31069.1 33 TKHHQTYVTNLKN 45
                4445555555444 PP

  == domain 2  score: 110.5 bits;  conditional E-value: 4.3e-36
                 HHHHHHHHHHSSHHHHHHHHHHHHHHSSSSEEEEEEEETT.TEEEEEEEETTTBGGGGTTCEEEEEE-SGGGTHHHHTT-HHHHHHHHGGGBBHHHHHH CS
    Sod_Fe_C   4 elaeaieedfgslekfkkefkaaalavfgsGwawLvldkk.kkLeivttknqdnplvkeakplLalDvwehAYyldyqnkradYieafwnvvnWkevee 101
                 el +ai+++++sl+ fk++f++  l+++gsGw+wLv++++ ++L+i+ttk+q+  + ++ kplL++D wehAYyl+y n++a+Y + +wnv+nW +v+e
  KHJ31069.1 101 ELVNAITARWKSLDFFKESFTTVLLGIKGSGWGWLVQNEQsGSLDIITTKDQEV-VPAGLKPLLGIDFWEHAYYLQYLNDKASYAKGIWNVINWVKVQE 198
                 799**********************************98867***********6.777999************************************98 PP

                 H CS
    Sod_Fe_C 102 r 102
                 r
  KHJ31069.1 199 R 199
                 7 PP

>> Sod_Fe_N  Iron/manganese superoxide dismutases, alpha-hairpin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.2   2.4   5.7e-36   5.1e-32       2      82 .]       7      87 ..       6      87 .. 0.98

  Alignments for each domain:
  == domain 1  score: 110.2 bits;  conditional E-value: 5.7e-36
                ------SS-TTTTTTTS-HHHHHHHHHTHHHHHHHHHHHHHHCHHHHCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTB- CS
    Sod_Fe_N  2 yeLpeLpYaydaLePhisketlelHhdkHhktYvnnlNkalekleeakkkleelvlkklekalrnnagghvnHslfwknls 82
                y Lp+LpYaydaLePhis ++++lHh+kHh+tYv+nl ++le+l++a+++l+ +++ +l+ al++n+ggh+nH+lfw+nl+
  KHJ31069.1  7 YALPSLPYAYDALEPHISGQIMKLHHTKHHQTYVTNLKNTLETLSKATSSLDLISQLHLQAALSFNGGGHINHTLFWENLA 87
                99*****************************************************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       519  (0.0289475); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1597.57
//
Query:       KHJ31070.1  [L=541]
Description: hypothetical protein EV44_g6119 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-13   51.0   2.9    3.9e-13   49.5   2.9    1.9  1  MBOAT_2   Membrane bound O-acyl transferase family
  ------ inclusion threshold ------
        0.1   12.4   0.0       0.19   11.6   0.0    1.3  1  YiiD_C    Putative thioesterase (yiiD_Cterm)


Domain annotation for each model (and alignments):
>> MBOAT_2  Membrane bound O-acyl transferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.5   2.9   4.3e-17   3.9e-13       6      83 .]     356     440 ..     351     440 .. 0.85

  Alignments for each domain:
  == domain 1  score: 49.5 bits;  conditional E-value: 4.3e-17
     MBOAT_2   6 gslleay..slrrfWgrfWHqlfrrglkstakkilrlllgsk...larylqllvaFllSGllHaagdytqlap..estallfFll 83 
                 g +++ y  +l ++Wg  WHq fr  ++s++++++r    +    +a+ + l++aF+lSG+lH a +  +l p  +s a+ fF+l
  KHJ31070.1 356 GYFSNIYknGLGGLWGDYWHQSFRLHFTSPTNFLIREGYIKPgtfIAKTTSLFCAFFLSGFLHWASSSSTLPPtrPSHAMYFFVL 440
                 55666655599*************************988744456***************************9655559999985 PP

>> YiiD_C  Putative thioesterase (yiiD_Cterm)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.1e-05      0.19      46      71 ..      97     122 ..      93     138 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.1e-05
      YiiD_C  46 mFaGSiytlatltgWglvwLqlkeag 71 
                  FaGS+++ ++l++W++++ +  + +
  KHJ31070.1  97 SFAGSLSAYTILASWTWLIFKKPQWE 122
                 5***************9988766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (541 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 3578.83
//
Query:       KHJ31071.1  [L=246]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0071   15.9   3.2     0.0071   15.9   3.2    1.5  2  Topoisom_I_N  Eukaryotic DNA topoisomerase I, DNA binding fra
  ------ inclusion threshold ------
      0.076   12.9   0.4        4.3    7.2   0.1    2.2  2  DUF2723       Protein of unknown function (DUF2723)


Domain annotation for each model (and alignments):
>> Topoisom_I_N  Eukaryotic DNA topoisomerase I, DNA binding fragment
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0      0.72   6.4e+03      66      76 ..      89      99 ..      80     118 .. 0.48
   2 !   15.9   3.2   7.9e-07    0.0071      72     119 ..     153     200 ..     137     215 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 0.72
                  HHHHHHHHHTT CS
  Topoisom_I_N 66 kdfkkvlkeke 76
                  k+++k  ++ +
    KHJ31071.1 89 KEYQKRYQDLR 99
                  33333332211 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 7.9e-07
                   HHHTT----GGGEE-HHHHHHHHHHHHHHTT-----HHHHHHHHHHHH CS
  Topoisom_I_N  72 lkekekikelekcdFskikeylekekekkkaltkeekkklkeekekle 119
                    k+++   +++kc+F +i++++e++ ++kk++ ke   ++k+ek++ +
    KHJ31071.1 153 SKSQKSQGSVAKCNFCSISKHTEQKCREKKRMVKEGSVNKKDEKHENK 200
                   3455557899************************99888888877655 PP

>> DUF2723  Protein of unknown function (DUF2723)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.1   0.00048       4.3     110     160 ..      20      76 ..       9      82 .. 0.75
   2 ?    3.7   0.0    0.0057        51     107     147 ..     134     174 ..     131     176 .. 0.91

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.00048
     DUF2723 110 alvlwlilkweeeade......krsdrwlvliayligLslgvhllnllllpaially 160
                 a +lw + ++ + +++      + sd+ l+ ++ ++ +sl++++ nl+++   ++ y
  KHJ31071.1  20 ATMLWSTWWVAKLKQTvphvktAPSDSPLITLTTIVNISLANRQANLMTITHRFWTY 76 
                 45555544444444423334447889************************9998877 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0057
     DUF2723 107 lftalvlwlilkweeeadekrsdrwlvliayligLslgvhl 147
                 l+++ +l+  l+w+++ ++++s++    +a +   s++ h+
  KHJ31071.1 134 LIISEMLYEYLRWTSTTQKSKSQKSQGSVAKCNFCSISKHT 174
                 6788899*****************99999999999999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1595  (0.088962); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1764.43
//
Query:       KHJ31072.1  [L=348]
Description: hypothetical protein EV44_g1755 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   13.2   0.0       0.44   11.3   0.0    2.0  1  DUF3744   ATP-binding cassette cobalt transporter


Domain annotation for each model (and alignments):
>> DUF3744  ATP-binding cassette cobalt transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.5e-05      0.44      15      46 ..     109     140 ..     108     157 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.5e-05
     DUF3744  15 itaLKkagidltslnqlsnleklalsqdkekl 46 
                 it +K+ +++lt+++  +nl++++++++ +k 
  KHJ31072.1 109 ITLMKNGNVSLTQESYCKNLKTVNIKEVVTKT 140
                 899***********************965554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2516.12
//
Query:       KHJ31073.1  [L=648]
Description: hypothetical protein EV44_g3480 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (648 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       945  (0.0527079); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.24s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 4657.52
//
Query:       KHJ31074.1  [L=203]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.094   12.1   2.1       0.25   10.7   0.2    2.0  2  DUF1593   Protein of unknown function (DUF1593)


Domain annotation for each model (and alignments):
>> DUF1593  Protein of unknown function (DUF1593)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1     0.013   2.4e+02      10      48 ..      12      46 ..       9      91 .. 0.68
   2 ?   10.7   0.2   1.4e-05      0.25      22      69 ..     141     188 ..     137     199 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.013
                S-THHHHHHHHHHHTGGGSEEEEEEE--BTTB------H CS
     DUF1593 10 nepDDaeSlvrlLlyanefdieglvatssvwhkkktkpe 48
                +++DD++Sl      ++e++++g+  +ss  +k++ k++
  KHJ31074.1 12 ATHDDNDSL----NLNDELKLQGITFASSEDMKDSLKHS 46
                578888885....68999999999999888776555522 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 1.4e-05
                 HHTGGGSEEEEEEE--BTTB------HHHHHHHHHHHHHHHHHTTTST CS
     DUF1593  22 LlyanefdieglvatssvwhkkktkpekieeiidaYekvlpnLkkhak 69 
                 L+ + + +++ l +t ++w  +  k ++++ +i++Y+k +++Lk+h++
  KHJ31074.1 141 LTSQAQSQTKILSITARFWTFQLDKNTTLQGFIKEYQKRYQELKEHTN 188
                 5666777888899999999977777889******************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1075  (0.0599587); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1594.68
//
Query:       KHJ31075.1  [L=105]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       172  (0.0095934); expected 358.6 (0.02)
Passed bias filter:                      148  (0.00825478); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.20s 00:00:00.59 Elapsed: 00:00:00.39
# Mc/sec: 811.29
//
Query:       KHJ31076.1  [L=315]
Description: hypothetical protein EV44_g4145 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2313.51
//
Query:       KHJ31077.1  [L=82]
Description: hypothetical protein EV44_g3901 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00022   20.9   0.0    0.00026   20.7   0.0    1.0  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
      0.058   14.2   0.0      0.067   14.0   0.0    1.1  1  Lbh       Cardiac transcription factor regulator, Development


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   2.9e-08   0.00026       5      72 ..       9      75 ..       5      81 .. 0.90

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 2.9e-08
       RVT_2  5 lvslPkdrkaigsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaae 72
                l s P++ +  gsr+v  +k     +++ k+rlv+q f+    ++   + +P ++  s r+ll++++ 
  KHJ31077.1  9 LSSVPQGARIFGSRFVAEMKMPGTAQANPKSRLVVQAFKDDGKVQVL-TQSPTLQRVSQRILLSISVS 75
                7789**********************************998887765.78999999999****99986 PP

>> Lbh  Cardiac transcription factor regulator, Developmental protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   7.5e-06     0.067      15      66 ..      27      78 ..      17      81 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 7.5e-06
         Lbh 15 rdepgssqhpesprlsnqlfkdrgeierveklqdiq.vsqktrLPSiVVEase 66
                +  pg  q++ ++rl  q+fkd g+++ + +   +q vsq+  L Si V + +
  KHJ31077.1 27 MKMPGTAQANPKSRLVVQAFKDDGKVQVLTQSPTLQrVSQRI-LLSISVSPED 78
                667889999999************************888876.6699998877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.24s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 641.11
//
Query:       KHJ31078.1  [L=528]
Description: putative glycosyltransferase family 69 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-65  221.8   0.0    1.4e-65  221.4   0.0    1.2  1  CAP59_mtransfer  Cryptococcal mannosyltransferase 1


Domain annotation for each model (and alignments):
>> CAP59_mtransfer  Cryptococcal mannosyltransferase 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  221.4   0.0   7.8e-70   1.4e-65       1     241 []      94     354 ..      94     354 .. 0.90

  Alignments for each domain:
  == domain 1  score: 221.4 bits;  conditional E-value: 7.8e-70
  CAP59_mtransfer   1 kvfiAanlynneell.pewleallelirfLgpenvfvSiyesgskdgtkeaLraleaelealgversivlneeteleldeles.....gkkelk 88 
                      kvfiAan+ + + l+ ++w+ +ll+l++++g ++v+vSiy   +    +++L+ +      l++e++iv++e +  +ld l++     g+++ k
       KHJ31078.1  94 KVFIAANIADGD-LIdNSWGPSLLSLVDLIGVDRVYVSIYGYPT----AQLLQLA----GMLKCEHNIVSEELEPINLDILPRillpnGDQRIK 178
                      79*******977.666************************9875....6666555....889*******99999999999999***99999*** PP

  CAP59_mtransfer  89 RIeyLaelRNkaLepLeelakegkekfdkvlFlnDvvftaedileLleqqn......geydaaCalDfskkplkfyDtwvlRdleGkeflsplw 176
                      RI++Lae+RNkaL+pL el+++g+ kfdkvlF+nDv+f+++++l+L++ +n      +ey+aaCa Df+ +++k+yDt+++Rd+eG++++ pl+
       KHJ31078.1 179 RISFLAEIRNKALQPLAELERKGQ-KFDKVLFINDVFFNPSEALRLIWGTNvnkhgkAEYKAACAADFI-TSWKYYDTFATRDAEGYSMGLPLF 270
                      ******************988776.8***********************7655565577**********.678********************* PP

  CAP59_mtransfer 177 pyfks...eesreaveagldpvpVksCWnGmvaldaepflae..................eklrFRaseesaseleasEcclihaD 241
                      p+f+s   ++sr++v ag+d v+VksCW+Gmv +da+ f+++                   ++rFR+   s+s+++asEccl+haD
       KHJ31078.1 271 PWFSSkglAASRKDVLAGRDSVRVKSCWGGMVSFDARYFMSTeqenseatsnsirslntkFPVRFRSE--SESFWDASECCLVHAD 354
                      *****9999****************************9944466677777777777777799*****5..4569***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (528 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3566.58
//
Query:       KHJ31079.1  [L=539]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.041   13.9   0.1        1.5    8.8   0.0    2.6  2  DUF3854         Domain of unknown function (DUF3854)


Domain annotation for each model (and alignments):
>> DUF3854  Domain of unknown function (DUF3854)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   8.2e-05       1.5      15      63 ..     158     211 ..     153     224 .. 0.69
   2 ?    1.8   0.0     0.012   2.2e+02      55      97 ..     377     419 ..     363     424 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 8.2e-05
     DUF3854  15 itEGakKaaallsag..yvaialpGvtngyreekdeegekiekk...klipele 63 
                 i+E++k  aa ++a+   ++ia++Gv +  +++  + +++ ++    +l + ++
  KHJ31079.1 158 IIEAEKRRAAKITANlrTCTIAINGVQMALSTDGADGNKEFSQGlliYLRAAIA 211
                 89********99976558***********9665554443333221134444444 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.012
     DUF3854  55 kkklipeleklakegreiliaFDqDtkpktiknVraaikrlgk 97 
                   ++ ++l +++ ++  + i F +++   t+  V+a+ikr+++
  KHJ31079.1 377 TIEPASDLVTYHIPNVPVAIQFPNNKVFVTKDMVKAEIKRVTQ 419
                 34888999999****************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (539 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1128  (0.0629148); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 3945.82
//
Query:       KHJ31080.1  [L=904]
Description: putative metalloproteases catalytic [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-82  276.1   0.2    3.2e-82  275.3   0.2    1.4  1  Peptidase_M1     Peptidase family M1 domain
    3.6e-78  263.3   0.8    3.6e-78  263.3   0.8    2.0  2  ERAP1_C          ERAP1-like C-terminal domain
    4.1e-42  144.5   1.5    3.1e-41  141.6   0.3    2.3  2  Peptidase_M1_N   Peptidase M1 N-terminal domain
  ------ inclusion threshold ------
      0.032   14.1   0.0      0.079   12.8   0.0    1.6  1  SprT-like        SprT-like family
      0.034   13.5   0.0      0.063   12.6   0.0    1.4  1  MATalpha_HMGbox  Mating-type protein MAT alpha 1 HMG-box
      0.035   14.4   2.1        6.7    7.0   1.3    2.9  3  DUF1570          Protein of unknown function (DUF1570)


Domain annotation for each model (and alignments):
>> Peptidase_M1  Peptidase family M1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  275.3   0.2   1.1e-85   3.2e-82       1     218 []     255     472 ..     255     472 .. 0.99

  Alignments for each domain:
  == domain 1  score: 275.3 bits;  conditional E-value: 1.1e-85
                   HHHHHHHHHHHHHHHHHTS--SSSEEEEEEESSTTSSEEEETTEEEEEGGGC-SSTTTS-HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGGHHHHH CS
  Peptidase_M1   1 yalevtkkllefleeyfkvpYplpkldlvalpdfsagAMEnwglityreelllvdpenssesdkrsvaeviaHElaHqWfGnlVtmkwWddlwLnEG 97 
                   +al  + ++++++++ f+++Yplpk+dl+a+++fs gAMEnwglityr ++ll+++++s++s+k ++a+++aHElaHqWfGnlVtm+wW++lwLnEG
    KHJ31080.1 255 FALGLVPQIIDYYSDIFGIEYPLPKCDLLAVHEFSHGAMENWGLITYRTTALLFNEKVSDTSYKVRIATTVAHELAHQWFGNLVTMDWWNELWLNEG 351
                   68889999***************************************************************************************** PP

                   HHHHHHHHHHHHHSCCCHCHHHHHHHCHHHHHHHHTSTTHHHSSGG-GSHHHHHHTSSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHCTTEEE CS
  Peptidase_M1  98 fatyleylildklepewevseqllleeveealsedaldeshpitqevekpseidevFdsiaYeKGasllrmlekllgeevFqkglksYlkefkykna 194
                   fat++++  +d ++p+w+ + +++ e +++a+s d+l++shpi++ v+++ ++d++Fdsi+Y KG+s++rml+++lg+e+F +g+ +Ylk ++y+na
    KHJ31080.1 352 FATWVASFAVDYIHPKWHAWPRFISEGMQTAFSLDSLRSSHPIEVPVKDALDVDQIFDSISYLKGSSVIRMLASYLGQETFLRGVGAYLKAHAYGNA 448
                   ************************************************************************************************* PP

                   -HHHHHHHHHHCCCSCHHTHHHHH CS
  Peptidase_M1 195 etedlwdaleealnkdisevmdtw 218
                   +t+dlw++l+e++ ++i+++md w
    KHJ31080.1 449 TTDDLWTSLSEVSRQNITSLMDPW 472
                   ***********************9 PP

>> ERAP1_C  ERAP1-like C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.39   1.2e+03       4      18 ..     115     129 ..     114     131 .. 0.89
   2 !  263.3   0.8   1.2e-81   3.6e-78       1     314 [.     546     860 ..     546     861 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.39
                 ESGGG-SSSEEEE-H CS
     ERAP1_C   4 lNdddtGyyrVnYde 18 
                 +N ++ G+yr +Y +
  KHJ31080.1 115 INNNMAGFYRSKYKP 129
                 7************65 PP

  == domain 2  score: 263.3 bits;  conditional E-value: 1.2e-81
                 -EEESGGG-SSSEEEE-HHHHHHHHHHHHGGGS-HHHHHHHHHHHHHHHHTTSS-HHHHHHGGG.GGGG--SHHHHHHHHHHHHHHHHHHTTST.THHH CS
     ERAP1_C   1 lvllNdddtGyyrVnYdeeslaalleqllskklspldRaglisdafalaragelsaadlldlllgylanEtdylvwsqalsqlatlksllsadp.lyaa 98 
                 +++lN d +G+yr+nY++++l +l++ ++++ l  ++++gl++da ala +ge s  +ll+l++g+ ++Et+y vwsq+ls+l+++++++  d+ + ++
  KHJ31080.1 546 FYKLNKDYSGFYRTNYSPSRLVTLSK-QIDR-LNLTEKIGLVADAGALAVSGEASSVALLTLVEGF-QSETNYFVWSQILSSLDSIRTSFIGDQlVSKG 641
                 79************************.5777.**********************************.7**********************98888**** PP

                 HHHHHHHHHHHHHHHHHHT.T..TS-HHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHCSTT..-S-HHHHHHHHHHHHHHS-HHHHHHHHHHHHC-S CS
     ERAP1_C  99 lkaflrklleplaeklgwepg..eshldaqlrslllsaacaagdpevveearklfkawlegdd..lippdlrwavycalaanggeaewdallerykdts 193
                 lk+f+ +l++p++ek+gwe++  ++ l +qlr+ll+ +a+ +g+++v++ea+++f+ +++++d  l++++lr+a++ +++ +gg +e++al +++ +t+
  KHJ31080.1 642 LKRFVIRLISPIVEKIGWESSldDDILISQLRALLILTAGLNGHKSVITEAKRRFELYVTNKDktLVNQNLRSAIFGVAIHKGGNSEYKALKNEWLQTT 740
                 ******************75566899********************************87666645**************99************97777 PP

                 SHHHHHHHHHHHCC-S-HHHHHHHHHHCTTT..S-GGGHHHHHHHH.HSTTHHHHHHHHHHHCHCCHHHHTSSTS.CHHHHHHHHHTT--SHHHHHHHH CS
     ERAP1_C 194 apsekeaalralaatpdpellerllnfvlesdevrnqdlrallaglannpegrellwefvkenwdalakrwsgge.ildrivkgllpgftseeelaeie 291
                 + ++ke+alral+ ++ +++  ++l+f++  ++v +qd+++ + +l++n ++r +lw ++++++d+++++++++  +ldr+++ +l +f+  e   ei 
  KHJ31080.1 741 SIDGKEIALRALGRIRVSKIHDEYLEFLF--KDVATQDIHTGALALSTNSKARLTLWRYIQSHFDQIKDKLGKNMvMLDRFLRLSLTRFNEREVEREIA 837
                 66**************************9..57*************999**********************9766688********************* PP

                 HHHCHTT--GGGHHHHHHHHHHH CS
     ERAP1_C 292 affadkdtpglrrtlkqaletvr 314
                  ffa+kd +g++rtl  + +t++
  KHJ31080.1 838 TFFANKDNRGYDRTLGIISDTIK 860
                 ***************99999987 PP

>> Peptidase_M1_N  Peptidase M1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.6   0.3     1e-44   3.1e-41       2     186 .]      17     215 ..      16     215 .. 0.86
   2 ?    1.4   0.0      0.11   3.3e+02      95     109 ..     548     562 ..     517     568 .. 0.80

  Alignments for each domain:
  == domain 1  score: 141.6 bits;  conditional E-value: 1e-44
                     EEEEEEEE.EEETT.TTEEEEEEEEEEEESS-ECEEEEEESSEEEECEEEEECTTCTCEEEEEEEECTTTTC..EEEEECCEEETTCEEEEEEEE CS
  Peptidase_M1_N   2 pehYdldl.kidlk.ektfkGsvtitlqlkeatseivldakdlkiksvslsaevksesvkidfkieqkdeel..ltiklkeslqqtskytLeiey 92 
                     p +Ydl+l ++ ++ ++ ++G+v+i  ++ ++ ++++++a+++k +s++++ e+ + ++ ++  +  +d +   +ti+++ +   ++++t+ i++
      KHJ31080.1  17 PINYDLSLyDLEFEgSFMYQGTVRILSKVIKSFKDLTMNAHEIKLQSAEIHLEQLNSQKAFESVEFSYDSQRqrVTIHFPVEIPISERATIVIKF 111
                     788999884456668999***************************9999987666666666555555444443499999887777********** PP

                     EEE-BSSSSEEEEEEEEE..........TSCEEEEEEEE-TTTTGGGTS-B--STTSEBEEEEEEEEETTSEEEESSECCCEEEETTCEEEEEEE CS
  Peptidase_M1_N  93 egelndklaGlykstYtd..........kgekkvvvvTqfeatdARsafPCfDePsvKAtftisikapkeetalSnmpeeeseklengqkiteFe 177
                     +g +n+++aG+y+s+Y+           +g  + +++Tqfe+ dAR+afPCfDeP+ KAtf+++i++p +++alSnmpe+ s  +++g+k++ Fe
      KHJ31080.1 112 QGTINNNMAGFYRSKYKPveppllsvprDGDFNLMFSTQFESCDARRAFPCFDEPNLKATFDFKIEVPDDQVALSNMPEKCSIVTKKGFKTVSFE 206
                     ****************74434444455577889************************************************************** PP

                     EEESBEGGG CS
  Peptidase_M1_N 178 qtpkmstYL 186
                     +tp mstYL
      KHJ31080.1 207 RTPIMSTYL 215
                     ********9 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.11
                     E-BSSSSEEEEEEEE CS
  Peptidase_M1_N  95 elndklaGlykstYt 109
                     +ln+++ G+y+++Y 
      KHJ31080.1 548 KLNKDYSGFYRTNYS 562
                     589*********996 PP

>> SprT-like  SprT-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.6e-05     0.079      47      77 ..     304     334 ..     285     357 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.6e-05
   SprT-like  47 asIeLseklldsrsedrllntLaHElcHlal 77 
                 + + ++ek+ d+  + r+  t+aHEl+H ++
  KHJ31080.1 304 TALLFNEKVSDTSYKVRIATTVAHELAHQWF 334
                 67889***********************996 PP

>> MATalpha_HMGbox  Mating-type protein MAT alpha 1 HMG-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.1e-05     0.063      78     117 ..     787     826 ..     763     838 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.1e-05
  MATalpha_HMGbox  78 ekdpfrnkWdliakvYsaiRdqlgkdkvtLqkflsiavph 117
                      +       W  i + +  i+d+lgk++v L++fl++  + 
       KHJ31080.1 787 NSKARLTLWRYIQSHFDQIKDKLGKNMVMLDRFLRLSLTR 826
                      44455578**************************997765 PP

>> DUF1570  Protein of unknown function (DUF1570)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       5.1   1.5e+04      84     103 ..     197     220 ..     184     223 .. 0.68
   2 ?    7.0   1.3    0.0023       6.7       2      40 ..     322     358 ..     321     364 .. 0.80
   3 ?    4.9   0.0      0.01        31      19      92 ..     364     438 ..     362     463 .. 0.68

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 5.1
     DUF1570  84 ddeFrsett....aeqaYaeaWal 103
                  ++F++++     + + Y  aWa+
  KHJ31080.1 197 KKGFKTVSFertpIMSTYLLAWAI 220
                 555555443333478899999997 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0023
     DUF1570   2 iatvaHEavHqlayniGvqsRladtpmWvsEGlaefFes 40 
                 ++tvaHE +Hq   n      +  +  W++EG+a++ +s
  KHJ31080.1 322 ATTVAHELAHQWFGNLVTM--DWWNELWLNEGFATWVAS 358
                 679*********9997555..555568*******99877 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.01
     DUF1570  19 vqsRladtpmWvsEGlaefFessklsegaswkglgrvnkdrlkefrelksderpgdvarl..kllvsddeFrsett 92 
                 ++++   +p+++sEG+ + F  ++l  +     + + ++  + +  + +s  + ++v r+    l ++   r + +
  KHJ31080.1 364 IHPKWHAWPRFISEGMQTAFSLDSL-RSSHPIEVPVKDALDVDQIFDSISYLKGSSVIRMlaSYLGQETFLRGVGA 438
                 5778899***************999.33444556677888888866666655555554443333444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (904 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.70u 0.26s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 6069.16
//
Query:       KHJ31081.1  [L=1042]
Description: hypothetical protein EV44_g2981 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.3e-39  134.4   1.1    2.3e-39  134.4   1.1    2.1  2  JmjC          JmjC domain, hydroxylase
    2.8e-17   62.8   5.4    5.5e-17   61.9   5.4    1.5  1  zf-HC5HC2H_2  PHD-zinc-finger like domain
    1.8e-15   56.9   5.0    4.4e-15   55.7   5.0    1.7  1  zf-HC5HC2H    PHD-like zinc-binding domain
    1.2e-12   47.6   0.3    3.9e-12   45.9   0.3    2.0  1  JmjN          jmjN domain


Domain annotation for each model (and alignments):
>> JmjC  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.4   1.1   5.1e-43   2.3e-39       1     114 []     303     420 ..     303     420 .. 0.97
   2 ?   -2.6   0.0       1.6   7.4e+03      26      44 ..     786     804 ..     779     830 .. 0.62

  Alignments for each domain:
  == domain 1  score: 134.4 bits;  conditional E-value: 5.1e-43
                 EEEEE-TT-EEEEE--GGG-EEEEEEEEES-EEEEEE-GGGHHHHHHHHHHH...HHCCSTTGCCTTTCEE-HHHHHHT.T---EEEEE-TT-EEEE-T CS
        JmjC   1 wlylgmpksttpwhiedqglySinylhfgapkvWyiipeekkeklekvlskk...nskeqpdllrhkstlispkqleke.gipvyrfvqkpgefVfvfp 95 
                 +ly+g++kst++wh+ed +lySinylhfgapk+Wy+i + ++e++ek++  k   ++k+++++lrhk+ +isp  l+ke +i+v+++v++pgef+++fp
  KHJ31081.1 303 YLYIGSWKSTFSWHLEDVDLYSINYLHFGAPKQWYSISQGDRERFEKAMAMKwpdEYKHCNQFLRHKTFQISPAALWKEfKIKVNKIVHRPGEFMITFP 401
                 79************************************************99999899*****************776659****************** PP

                 T-EEEEEESSSEEEEEEEE CS
        JmjC  96 gayHsvfnlgfniaeavnf 114
                 ++yH++ nlg+n+aeavnf
  KHJ31081.1 402 YGYHAGYNLGYNCAEAVNF 420
                 ******************9 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.6
                 EEEES-EEEEEE-GGGHHH CS
        JmjC  26 lhfgapkvWyiipeekkek 44 
                 + ++++++Wy i +   e 
  KHJ31081.1 786 DLTKDSQIWYYIGKTSTEA 804
                 5677788888886544433 PP

>> zf-HC5HC2H_2  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.9   5.4   1.2e-20   5.5e-17       2      94 ..     526     615 ..     525     640 .. 0.91

  Alignments for each domain:
  == domain 1  score: 61.9 bits;  conditional E-value: 1.2e-20
  zf-HC5HC2H_2   2 eCvlCkkkgGalkktsderwvHvlCallvpevsfsnvaerepvdvekikkerlkekCllCkkrkGaciqCskkeCktafHvtCalaaglvmel 94 
                    C+lC++ +  + kt++++++H +C  ++pe+s+sn   +   d++ i k+r+ +kC++C++++Gac+qCs+++C++a+H tCa a+g+ ++ 
    KHJ31081.1 526 PCILCPNFDFEVLKTDNGKHAHRICGEYIPETSVSNGIVQ---DINFISKARMGLKCIYCRSKRGACFQCSSAKCTRAYHGTCAAASGVLVQK 615
                   6***********************************9985...588899999************************************99874 PP

>> zf-HC5HC2H  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   5.0   9.9e-19   4.4e-15       1      89 [.     547     640 ..     547     641 .. 0.83

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 9.9e-19
  zf-HC5HC2H   1 HvvCalwipevvfeeekeiemeeiedvekikkerkklkCylCkkkvGaciqCskkkCkkafHvtCakeagllleee...........eekeklksyCkk 88 
                 H++C  +ipe+ +++        ++d++ i+k+r+ lkC++C++k Gac+qCs +kC++a+H tCa+++g+l+++             ++e + + C+ 
  KHJ31081.1 547 HRICGEYIPETSVSN------GIVQDINFISKARMGLKCIYCRSKRGACFQCSSAKCTRAYHGTCAAASGVLVQKVwssrfaqdgteYKEEVYDFRCRF 639
                 999******987754......3589************************************************96645555544444444577777777 PP

  zf-HC5HC2H  89 H 89 
                 H
  KHJ31081.1 640 H 640
                 7 PP

>> JmjN  jmjN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.3   8.7e-16   3.9e-12       1      34 []      54      87 ..      54      87 .. 1.00

  Alignments for each domain:
  == domain 1  score: 45.9 bits;  conditional E-value: 8.7e-16
                -EE---HHHHC-HHHHHHHHHHHHCCCSEEEE-- CS
        JmjN  1 PvFyPTeeEFkdplkYiekieplgekyGIcKIvP 34
                PvF+PT+++F d+ k+i+ ++p+g+ +GI+KI+P
  KHJ31081.1 54 PVFTPTMDQFYDFEKFISAVNPWGMTHGIAKIIP 87
                9********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1042 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       768  (0.0428356); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.73u 0.28s 00:00:01.01 Elapsed: 00:00:00.45
# Mc/sec: 7003.34
//
Query:       KHJ31082.1  [L=272]
Description: hypothetical protein EV44_g3889 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.01   16.4   0.0      0.023   15.3   0.0    1.6  1  Asp_protease_2   Aspartyl protease
      0.019   15.5   0.0      0.048   14.2   0.0    1.6  1  gag-asp_proteas  gag-polyprotein putative aspartyl protease


Domain annotation for each model (and alignments):
>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   0.0   2.6e-06     0.023      12      90 .]     132     217 ..     127     217 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.6e-06
  Asp_protease_2  12 fllDTGasttlispelaeklglkvreseltvrvsgaggevkarlvrlds.....lklggltlknvpalvldlgeeid..glLGmdf 90 
                     ++ D G++ +lisp+l++ l+l++ +++ ++      g+  ++ +r+ +     +  gg+t + ++++  d+g + d  +lLG+++
      KHJ31082.1 132 VCADKGSDLVLISPQLVRILRLEKNTLSSPQNQVITMGTADGASHRITErvsfvFVSGGITRHVHAFVRPDKGMTNDlfLLLGLPW 217
                     689**************999998888887766555566666666666655444344599999998888888887777667788765 PP

>> gag-asp_proteas  gag-polyprotein putative aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   5.3e-06     0.048      14      90 ..     134     218 ..     125     220 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.3e-06
                      EETT-SS-EEEHHHHHHTTGGGGEB..TT--....EE-TTSTT-EEEEEEEEEE.EETTEEEEEEEEEESSSSE....EEEHHHH CS
  gag-asp_proteas  14 vDTGAsstiiseelaerlglsrkedkgkvev....ktangeveakrvrldsvkiggielrnvsavvlegelddl....LLGldfL 90 
                       D G + ++is++l++ l+l++++  ++++     +ta+g     + r+  v + g  +r+v+a v +++ ++     LLGl +L
       KHJ31082.1 134 ADKGSDLVLISPQLVRILRLEKNTLSSPQNQvitmGTADGASHRITERVSFVFVSGGITRHVHAFVRPDKGMTNdlflLLGLPWL 218
                      5789999************999998877555122255555555555566667888888899*******9964444478***9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       368  (0.0205254); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2025.00
//
Query:       KHJ31083.1  [L=398]
Description: putative regulator of g protein signaling domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-09   36.2   0.0    9.4e-09   35.6   0.0    1.3  1  RGS       Regulator of G protein signaling domain
  ------ inclusion threshold ------
        1.1    9.7   4.0       0.63   10.4   0.5    2.5  3  LRRNT_2   Leucine rich repeat N-terminal domain


Domain annotation for each model (and alignments):
>> RGS  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.0     1e-12   9.4e-09      10     113 ..      88     210 ..      75     214 .. 0.89

  Alignments for each domain:
  == domain 1  score: 35.6 bits;  conditional E-value: 1e-12
                 HHHHHHHHHHHHTTCTHHHHHHHHHHHHHTS..................SHHHHHHHHHHHHHHHHTSTTSTTSSTS-HHHHHHHHHH.HCSSSTTTTT CS
         RGS  10 pgrslFreFlesefseenlsFwlaveefkka..................keqeelkkkakeIyneylapsspkelnidkklreelekr.lekeqpsrkl 89 
                   +s+F  +l ++++ e l+F ++  +++k+                   e e ++k  ++++++y+ p+ ++e+n+++++r++l +   e+ +p+++ 
  KHJ31083.1  88 WTLSAFMAYLSQNHCLETLEFTMDAAKYEKQyhamvtplnlqpnnntpsLEIEYVQKLWTKLIDAYIRPNGAREVNLPSDVRDKLLSLpCETTSPDPSE 186
                 3789******************************************998888888999*************************988761455599**** PP

                 THHHHHHHHHHHHHHHHHHHHTSH CS
         RGS  90 feeaqeevfellekdsypkFlkse 113
                 + +a + ++el+ ++    Fl+s 
  KHJ31083.1 187 LVKAVKITYELMDQSVLMPFLSSV 210
                 *********************985 PP

>> LRRNT_2  Leucine rich repeat N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.5     7e-05      0.63      10      29 ..      19      43 ..      18      47 .. 0.76
   2 ?   -1.6   0.0      0.39   3.5e+03       4      25 ..     199     223 ..     198     230 .. 0.64
   3 ?   -3.3   0.1       1.4   1.2e+04      18      25 ..     323     330 ..     317     332 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 7e-05
                HHHHCSB...T....TTTTTTGTCCC CS
     LRRNT_2 10 afKsslt..dp....pgaLssWnsss 29
                +fK+s +  ++    p++LssWn ++
  KHJ31083.1 19 QFKKSSNtaPSppqsPPFLSSWN-PD 43
                899999986225788999****7.44 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.39
                 HHHHHHHHHHCSB..T..TTTTTTG CS
     LRRNT_2   4 dadaLLafKsslt.dp..pgaLssW 25 
                 d  +L+ f ss+t ++      s W
  KHJ31083.1 199 DQSVLMPFLSSVTlSQtsERPHSAW 223
                 5678999999999533323335666 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 1.4
                 TTTTTTTG CS
     LRRNT_2  18 ppgaLssW 25 
                 p+ a+s W
  KHJ31083.1 323 PSTATSGW 330
                 67889999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 3065.11
//
Query:       KHJ31084.1  [L=453]
Description: putative cytosolic iron-sulfur protein assembly protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.6e-25   87.7  13.4    3.2e-07   30.9   0.2    7.4  7  WD40         WD domain, G-beta repeat
    1.1e-07   32.0   0.6       0.31   11.4   0.1    4.5  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.029   2.6e+02      15      37 ..      33      55 ..      22      56 .. 0.80
   2 !   11.5   0.2   4.8e-05      0.43       8      37 ..      68     103 ..      61     104 .. 0.80
   3 !   30.9   0.2   3.6e-11   3.2e-07       6      37 ..     153     185 ..     148     186 .. 0.91
   4 !   17.5   0.1   6.4e-07    0.0058       3      37 ..     198     236 ..     196     237 .. 0.81
   5 !   13.7   0.0     1e-05     0.091       1      37 [.     245     299 ..     245     300 .. 0.87
   6 !    9.1   0.0   0.00028       2.5      10      37 ..     341     369 ..     332     370 .. 0.84
   7 !    5.1   0.1    0.0051        46       9      37 ..     396     434 ..     389     435 .. 0.66

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.029
                EEEEETTSSEEEEEETTSEEEEE CS
        WD40 15 slafspdgawlasGsdDgtvriW 37
                s+ ++ d++++a+++ D+  ri+
  KHJ31084.1 33 SVPNPNDHQLIATATSDKLARIY 55
                6667889999999955***9998 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 4.8e-05
                 ESS.SSEEEEEEETTSSE.....EEEEETTSEEEEE CS
        WD40   8 tGH.ssvtslafspdgaw.....lasGsdDgtvriW 37 
                  GH  sv+s+a+ p  +      l++Gs D t+ iW
  KHJ31084.1  68 GGHsRSVRSIAWKPTRKKsdpitLVTGSFDATIGIW 103
                 39*655****777777779999999*********** PP

  == domain 3  score: 30.9 bits;  conditional E-value: 3.6e-11
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +l+GH   + ++a+sp+g++las+s+D+++ iW
  KHJ31084.1 153 VLEGHdAEIKDVAYSPSGQYLASCSRDKSIWIW 185
                 689**666************************* PP

  == domain 4  score: 17.5 bits;  conditional E-value: 6.4e-07
                 EEEEEESS.SSEEEEEEETTSSE...EEEEETTSEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgaw...lasGsdDgtvriW 37 
                 ++ +l  H  +v ++++ +d  +   las+++D t+r+W
  KHJ31084.1 198 TVAVLQDHtADVKCISWRKDDGMgelLASAGYDDTIRFW 236
                 6788999*888****76666666887999999******* PP

  == domain 5  score: 13.7 bits;  conditional E-value: 1e-05
                 TEEEEEEESS.SSEEEEEEETTSSE.................EEEEETTSEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgaw.................lasGsdDgtvriW 37 
                 ++c+  l+GH + +++l + p+ ++                 l+s+s D t+r+W
  KHJ31084.1 245 WECVALLEGHsGTIWALEWEPEVSMtkfqpslqgqeekgvprLMSASADLTIRLW 299
                 689999****555****76666666999999999********999999******* PP

  == domain 6  score: 9.1 bits;  conditional E-value: 0.00028
                 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  10 H.ssvtslafspdgawlasGsdDgtvriW 37 
                 H + ++s+++s++   ++s + Dg++ ++
  KHJ31084.1 341 HrFAIYSISWSKNTGRVLSTGADGKIVLY 369
                 8777*******99999986666****987 PP

  == domain 7  score: 5.1 bits;  conditional E-value: 0.0051
                 SSSS..EEEEEEETTSSE...............EEEEETTSEEEEE CS
        WD40   9 GHss..vtslafspdgaw...............lasGsdDgtvriW 37 
                  H++  ++++      +w               +++G+ Dg v+ W
  KHJ31084.1 396 CHGPyeINHI------TWcerwnsekqkkeeifITTGD-DGLVKAW 434
                 5644567777......5555556666668887455655.*****99 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   0.00013       1.2       7      77 ..      40     114 ..      36     131 .. 0.72
   2 !   11.4   0.1   3.5e-05      0.31      35      91 ..     155     216 ..     146     217 .. 0.74
   3 !    7.5   0.1   0.00054       4.8      35      71 ..     203     242 ..     195     266 .. 0.71
   4 ?    2.0   0.0     0.029   2.6e+02      38      66 ..     342     370 ..     329     379 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00013
  ANAPC4_WD40   7 mDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgk.....lLavaysdgevrlldaesgkvvhsls 77 
                    LiA at+d+  +++ l+   + ++ e +++++vrs+aWkp  k      L+ +  d ++ +   ++gk + +l+
   KHJ31084.1  40 HQLIATATSDKLARIYSLEDFSLHSVLEGGHSRSVRSIAWKPTRKksdpiTLVTGSFDATIGIWR-YNGKYLDKLT 114
                  56999999999999999988888888888999999999999865533333466666666666653.5566666555 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 3.5e-05
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlld...aesgkvvhslsvksek..avtclgWge 91 
                  +++d e++++a++p+g+ La    d ++ + +   ae  +  +++ v +++   v+c++W +
   KHJ31084.1 155 EGHDAEIKDVAYSPSGQYLASCSRDKSIWIWEevgAEGDDEFETVAVLQDHtaDVKCISWRK 216
                  5789************************9987222454445555544444455799999975 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.00054
  ANAPC4_WD40  35 dkedsevrsLaWkpd...gklLavaysdgevrlldaesgk 71 
                  +++   v++++W++d   g+lLa a  d ++r+   ++g+
   KHJ31084.1 203 QDHTADVKCISWRKDdgmGELLASAGYDDTIRFWRDSDGE 242
                  567889*******98666799***********99877775 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.029
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlld 66 
                     + s++W+++        +dg++ l++
   KHJ31084.1 342 RFAIYSISWSKNTGRVLSTGADGKIVLYE 370
                  5578899**88755555666899999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 3123.16
//
Query:       KHJ31085.1  [L=236]
Description: putative aminodeoxychorismate lyase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-19   70.9   0.0      2e-19   70.3   0.0    1.1  1  Aminotran_4  Amino-transferase class IV


Domain annotation for each model (and alignments):
>> Aminotran_4  Amino-transferase class IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.3   0.0   1.1e-23     2e-19      17     184 ..      41     228 ..      31     232 .. 0.78

  Alignments for each domain:
  == domain 1  score: 70.3 bits;  conditional E-value: 1.1e-23
  Aminotran_4  17 deHleRLrksaellglelpfdeeelrkileelleannsen.............grlrllvsrgggglgaatsepsvav...yvsalppgpeseke... 95 
                   +H +RL ++++ +  +++ ++  ++   +e+l   ++++             +rl+l+v ++g   ++ +++ps++v   y  +l+  ++ +k    
   KHJ31085.1  41 FYHHKRLLQACKFF--GWSKATAKIED-SKEFLSDIEKFVtfqliedhdisspLRLKLIVYKDGKIVYKGEPTPSIDVrnlYPLNLSDLLYTHKIecs 135
                  58************..88887777764.5666666666666778999999999999999999997777666666666522133444444444444999 PP

  Aminotran_4  96 .lplvtssdvrrdapsplpgaKtlnyldnvlarreakerg...adevllvdedgnvtEgstsNvfivkggelitPplssgiLpGitrrallel 184
                    +  ++ +++  +p + +++Kt+ + ++ la+ e         +evll++ +g+++Egs + v+++++g++itP+++ g+ +G+tr+++l++
   KHJ31085.1 136 sHTYKLYVSRQKIHPGSHTRIKTTFRQPYHLAQGEVGILHklgDNEVLLTNHSGEIMEGSYTSVYFRRNGQWITPSIEAGGQDGTTRKWALDQ 228
                  9555555557888888888****************9765533156**********************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       348  (0.0194099); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 1587.72
//
Query:       KHJ31086.1  [L=514]
Description: putative cysteine desulfurase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      7e-92  308.2   0.0    8.4e-92  308.0   0.0    1.1  1  Aminotran_5      Aminotransferase class-V
    3.2e-07   29.8   0.0    4.8e-07   29.3   0.0    1.3  1  Aminotran_1_2    Aminotransferase class I and II
    2.3e-05   23.9   0.0      3e-05   23.5   0.0    1.2  1  Beta_elim_lyase  Beta-eliminating lyase
    2.9e-05   23.6   0.0    0.00012   21.5   0.0    1.9  2  DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
     0.0088   14.6   0.0      0.012   14.1   0.0    1.2  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme


Domain annotation for each model (and alignments):
>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  308.0   0.0   2.3e-95   8.4e-92       1     371 []     115     479 ..     115     479 .. 0.98

  Alignments for each domain:
  == domain 1  score: 308.0 bits;  conditional E-value: 2.3e-95
                  EEEBTTTS----HHHHHHHHHHHHCTCCSSSSSSSHHHHHHHHHHHHHHHHHHHHHT-STGGGEEEESSHHHHHHHHHHHCCCC...-TTTSEEEEET CS
  Aminotran_5   1 iyldsaAttqkpqeVldalqeyytdynanvhrsvhhlgkeatkaveearekvaelinaeseeeiiftsGtteainlvalslars...lkpgdeivvte 95 
                  iyld++Att++ ++Vld++  +y + ++n+h+ +h +g+e+ kave+ r+++a+li+a+  +eiiftsG+te++n+ +++lar      ++++i++t+
   KHJ31086.1 115 IYLDMQATTPLDPRVLDSMLPFYCELYGNPHSRTHAYGWETEKAVEKSRKHIADLIGADP-KEIIFTSGATESNNMSIKGLARFcrrAGKKRHIITTQ 211
                  8**********************************************************7.*********************9998999********* PP

                  TSHGGGTHHHHHHHHHHTEEEEEEEBETTSCBEGGGHHHH--TTEEEEEEESBETTTTEB--HHHHHHHHHHTT-EEEEE-TTTTTTS---HHHHTES CS
  Aminotran_5  96 aehhanlvpwqelakrtgakvkvipldeegeldldelekllnektklvaithvsnvtGtiqpveeigklakkkgalvlvDaaqavghipidvkklgvD 193
                  +eh++ l  +++l+ ++ + ++++p++++g++dl++le++++++t+lv+i+ v+n++G+iqp+e+igk++++k++++++Daaqavg+ip+dv+k+++D
   KHJ31086.1 212 TEHKCVLDSCRHLQ-DEEFSITYLPVQSNGLIDLKNLEDAIRPETALVSIMSVNNEIGVIQPIEDIGKICRAKKVFFHTDAAQAVGKIPLDVNKMNID 308
                  *************7.88********************************************************************************* PP

                  EEEEETTTTTSSTT-EEEEEEHHHHHTS..SS.STTSEEEEETTEEEEHCTTGGGS.SS--HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH CS
  Aminotran_5 194 flafsghKllgPtGiGvlyvrkellekleplllggemveevsleettfaeapskfeaGTpnvagiiglgaaleyleeigleaiekhekelaeyllerl 291
                  ++++s+hK++gP+GiG+ yvr++  ++l pl  gg+       +e++       +++GT   a ++g+g+a ++    +++   k+ k+l+++ll +l
   KHJ31086.1 309 LMSISSHKIYGPKGIGACYVRRRPRVRLDPLISGGG-------QERG-------LRSGTLAPALVVGFGEACRIA-IEEMAYDSKRIKTLSDRLLTGL 391
                  ************************************.......9999.......9******************99.8888899*************** PP

                  CTSTTEEEES.-B-CTCBSEEEEEETTCSHHHHHHHHHHTTEEEEEE-TTT....HHHHHHTT.S.......-EEEEE--TTS-HHHHHHH CS
  Aminotran_5 292 kslpgvrlygpdkaerrasivsfnfkgvhaedvatlLdeegIavrsGhhca....qplmkrlale.......gtvRaSlyiynteeevdrl 371
                   s+++++ +g d++   +++v+++f +v+ e + ++L++  Ia++sG++c+    +p+++++al        +++R+++++ +te e+d++
   KHJ31086.1 392 LSMEHTTQNG-DSDSFYPGCVNVSFSYVEGESLLMALKD--IALSSGSACTsaslEPSYVLRALGnsdesahSSIRFGIGRFTTESEIDYV 479
                  ********99.899*******************999998..**********9999999999999999*********************975 PP

>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.3   0.0   1.3e-10   4.8e-07      48     292 ..     161     391 ..     155     482 .. 0.78

  Alignments for each domain:
  == domain 1  score: 29.3 bits;  conditional E-value: 1.3e-10
                    HHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHH.....HHHHHHHTTT-EEEEEESS-THHHHHHHHTTSEEEEEEBE.ETTTTEE-HHHHHH CS
  Aminotran_1_2  48 eleealakflgrseklklkreaavvvgsGagaliea.....lifllklnpgdeilvpdptyasyknilrlsggevvryply.seedfhldlealee 137
                    + ++ +a+++g       +++ +++++sGa++ +++     + f+ ++ +++ i+  +  +  + + +r+ + e +++ +   + +  +dl++le+
     KHJ31086.1 161 KSRKHIADLIG------ADPK-EIIFTSGATESNNMsikglARFCRRAGKKRHIITTQTEHKCVLDSCRHLQDEEFSITYLpVQSNGLIDLKNLED 249
                    568999*****......9999.*********977642111156777799*******************9988774444444045999********* PP

                    HHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTTTCBSSSSHTHHHHGGSTTSTTEEEEEESSSTTSSGGG-EEEE CS
  Aminotran_1_2 138 alkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsldavatranveeepnllivgslsKafGlaGeRvGyi 233
                    a++       +t ++ + s++N  G++ + e++ k+   +++++++   D a a++           ++v++   +l   s  K +G  G  +G++
     KHJ31086.1 250 AIRP------ETALVSIMSVNNEIGVIQPIEDIGKI---CRAKKVFFHTDAAQAVGKIP--------LDVNKMNIDLMSISSHKIYGPKG--IGAC 326
                    ***9......99************************...*******9999987776664........55555444677777778888888..8888 PP

                    EEEHHHHHHHHHHHHHHTS.....SHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHH CS
  Aminotran_1_2 234 lgnaavvsqlrklsrpfls.....ssllqaavaaalsdallkqs.eleemrqrlqkrrkelrdeL 292
                    ++  + +  l  l +++       s  l++a++     a +++  e+    +r+++++++l  +L
     KHJ31086.1 327 YVRRRPRVRLDPLISGGGQerglrSGTLAPALVVGFGEACRIAIeEMAYDSKRIKTLSDRLLTGL 391
                    88664444444443333333334466666666666666666554577777777777777777777 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   8.2e-09     3e-05      31     170 ..     156     293 ..     148     379 .. 0.82

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 8.2e-09
                      -HHHHHHHHHHHHHTT-S..EEEEES-HHHHHHHHH...HHH--T...TEEEEEETT-HHHHSSTTHHHHCC--EEEEE-EBTTTBE-HHHHHH CS
  Beta_elim_lyase  31 dktvnrLedavaelfgke..aalfvpqGtaAnsill...killqr...geevivtepahihfdetgaiaelagvklrdlknkeaGkmdleklea 116
                      +k v++  +++a+l+g++   ++f+   t +n++++   + +++r   +  +i t++ h +      + + ++   + l+ +++G +dl++le+
       KHJ31086.1 156 EKAVEKSRKHIADLIGADpkEIIFTSGATESNNMSIkglARFCRRagkKRHIITTQTEHKCVLDSCRHLQDEEFSITYLPVQSNGLIDLKNLED 249
                      56788888999****9986577898889********555455555221455777788888777777777778888888988888********** PP

                      HS--S-TTS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEEETT CS
  Beta_elim_lyase 117 aikevgaheekiklisltvTnntagGqvvsleelrevaaiakkygiplhlDgAR 170
                      ai++      +++l+s+   nn     +  ++ ++ + +i++++++ +h D+A 
       KHJ31086.1 250 AIRP------ETALVSIMSVNNE----IGVIQPIEDIGKICRAKKVFFHTDAAQ 293
                      ****......5889999999995....55677889999*************994 PP

>> DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   3.4e-08   0.00012      24     150 ..     158     296 ..     148     316 .. 0.76
   2 ?   -0.8   0.0       0.2   7.3e+02     315     361 .]     444     484 ..     370     484 .. 0.64

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 3.4e-08
                      HHHHHHHHHHHHHT..-SEEEEESSHHHHHHHHHHH.....TTTTTT-EEEEESSS-THHHHHHHHTT-EEEEE-B-T..TTSSB-GGGCGGG- CS
  DegT_DnrJ_EryC1  24 eveeFEkafaaylg..vkhaiavssGtaAlhlaLra.....lgvgpgdeVIvpsltFvatanavlelgakpvfvDvdp..dtynidpaaieaai 108
                       ve+  k +a+ +g   k  i +s +t+++ ++++        +g+++ +I++++       + ++l  +   +   p      id +++e ai
       KHJ31086.1 158 AVEKSRKHIADLIGadPKEIIFTSGATESNNMSIKGlarfcRRAGKKRHIITTQTEHKCVLDSCRHLQDEEFSITYLPvqSNGLIDLKNLEDAI 251
                      555556666777774335666677777777777766445544566777888888888777777777777666665554114578********** PP

                      -TTE..EEEEEB-G.GGB---HHHHHHHHHHCT-EEEEE-TT-TT CS
  DegT_DnrJ_EryC1 109 tert..kaIlpVhl.yGqvadmdalkaiaakhglkvieDaAhAlG 150
                       ++t    I+ V+   G +  ++ + +i++++++ +  DaA+A+G
       KHJ31086.1 252 RPETalVSIMSVNNeIGVIQPIEDIGKICRAKKVFFHTDAAQAVG 296
                      ****777899997538****************************9 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.2
                      SCCHHHHHHCCCHC-HHHHHHHHHEEEEEGGTTGSHHHHHHHHHHHH CS
  DegT_DnrJ_EryC1 315 qpvyaerkeeasgdlpnaerlaervlsLplypelteedvdrVvealr 361
                       p y  r      +l n+++ a++ + + +    te ++d+V +a+r
       KHJ31086.1 444 EPSYVLR------ALGNSDESAHSSIRFGIGRFTTESEIDYVLKAVR 484
                      4444444......4789999999999999999999999999999985 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   3.5e-06     0.012      46     179 ..     151     296 ..     120     319 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 3.5e-06
                      BTTT--HHHHHHHHHHHHHHT-.SEEEEESSHHHHHH.HHHHTTS-....TTEE..EEEESTSSHHHHHHHHHTHHH.TTCEEEEEST...TSH CS
  Cys_Met_Meta_PP  46 YsRsgnptrsvleeriaaLegg.eaalavssGmaAia.aailallk....aGde..ivvsddlYggtqrllkkvlkk.lgievkfvdt...sdl 127
                      Y+  +   ++   ++ia+L g+  + ++++sG + ++ ++i  l++    aG++  i+++++ +++  + ++++  + ++i++  v+     dl
       KHJ31086.1 151 YGWETEKAVEKSRKHIADLIGAdPKEIIFTSGATESNnMSIKGLARfcrrAGKKrhIITTQTEHKCVLDSCRHLQDEeFSITYLPVQSnglIDL 244
                      5555555555566789999999667899999988665144555543111246434499999888888888877776557777766665333799 PP

                      HHHHHHCCTTEEEEEEESS-TTTT----HHHHHHHHHHTT-EEEEEGTTTHT CS
  Cys_Met_Meta_PP 128 eelekaikentklvylEtptnpllkvvDiekiaklakkagvlvvvDntfasp 179
                      ++le ai+++t lv + ++ n    +  ie+i k++++++v    D++ a +
       KHJ31086.1 245 KNLEDAIRPETALVSIMSVNNEIGVIQPIEDIGKICRAKKVFFHTDAAQAVG 296
                      ****************************************999999877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3763.96
//
Query:       KHJ31087.1  [L=2116]
Description: putative atg c terminal domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-43  147.6   0.2    2.3e-43  147.6   0.2    3.1  3  ATG2_CAD  Autophagy-related protein 2 CAD motif
    7.6e-27   93.5   0.0      2e-26   92.2   0.0    1.8  1  ATG_C     Autophagy-related protein C terminal domain
  ------ inclusion threshold ------
       0.02   14.7   1.1       0.11   12.2   0.3    2.4  2  VPS13     Vacuolar sorting-associated protein 13, N-terminal


Domain annotation for each model (and alignments):
>> ATG2_CAD  Autophagy-related protein 2 CAD motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.2      0.31   1.9e+03      37     119 ..     231     309 ..     218     314 .. 0.63
   2 ?    0.1   0.1     0.097   5.8e+02      38      64 ..     788     814 ..     774     830 .. 0.82
   3 !  147.6   0.2   3.8e-47   2.3e-43       3     155 .]    1294    1445 ..    1292    1445 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.31
    ATG2_CAD  37 eqfsaklslrkaslllIDdvk.nlkeksskkskkersssssssqvsylskrGyvsigsissakvgvtvnedkdgeksvdvevnd 119
                 +++s++l+++++++  + +++ ++   ++k +++ ++s+++ ++v+  + +Gy +  s    ++  + +++  ++ +vd++ +d
  KHJ31087.1 231 DSISLRLKIEEIDVKAVGEYSdSV---DTKGEASIKESKKKDRLVHISQIQGYLEFESNLLSSLACSSTTS--QSFHVDIDARD 309
                 677778888888888888888222...23333344889999999999999999987654333333333333..33566666655 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.097
    ATG2_CAD  38 qfsaklslrkaslllIDdvknlkekss 64 
                 ++ +kl+++k+s+ l D +k++ ++s+
  KHJ31087.1 788 ETIIKLNIEKISINLLDRLKETVTPSN 814
                 5679****************7666655 PP

  == domain 3  score: 147.6 bits;  conditional E-value: 3.8e-47
    ATG2_CAD    3 klrDcvigLnPlrlksklllvltkakldvslgkdeqfsaklslrkaslllIDdvknlkeksskkskkersssssssqvsylskrGyvsigsissakv 99  
                   +r+c +gLnPl+l+sklll+lt+++l+++++k++++ ++l+l+k+s+l+I++v+nl++++    k++++ ++ ssqv++l+++Gyvsig++ssakv
  KHJ31087.1 1294 VFRNCTLGLNPLKLPSKLLLTLTETHLNLVFSKNDDIGVSLELKKISFLIINNVSNLASTKWA-LKNRKHFDDRSSQVTRLCSMGYVSIGYLSSAKV 1389
                  69*****************************************************99966665.445599*************************** PP

    ATG2_CAD  100 gvtvnedkdgeksvdvevnddllvLelCADStqtLiqllndLkpPttpp.keeKykt 155 
                   +++++  dge++v++ev ddl+vLe+CADStqtLi++l +L p   +p ke Ky+t
  KHJ31087.1 1390 VFQMKTI-DGEREVKIEVCDDLFVLESCADSTQTLIAVLGGLIPTPALPdKETKYRT 1445
                  ******9.**********************************99888999*****98 PP

>> ATG_C  Autophagy-related protein C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.2   0.0   3.3e-30     2e-26       2      96 .]    2021    2115 ..    2020    2115 .. 0.99

  Alignments for each domain:
  == domain 1  score: 92.2 bits;  conditional E-value: 3.3e-30
       ATG_C    2 slyasqPedlreGlqqAysslskglksaaqtilavpsevaeskgakgavkavvravPvavlrPligateavsktlqGvrnqldpearkesedKYK 96  
                  slya+qP ++ +Gl+ +y++l+++l  a+++i+av  ev+es++a ga+kav +++P+++lrP+ig+++a  ++l+G++n+ldp + +++e KYK
  KHJ31087.1 2021 SLYANQPFGVLQGLKGGYNGLQRDLLLARDAIIAVSGEVMESGTAVGAFKAVGKHAPTVILRPAIGVVKASGQILMGATNSLDPVNLQRAEAKYK 2115
                  89********************************************************************************************9 PP

>> VPS13  Vacuolar sorting-associated protein 13, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.3   1.9e-05      0.11       1     101 [.     189     299 ..     189     344 .. 0.70
   2 ?   -0.1   0.0      0.11   6.7e+02      50      86 ..     643     679 ..     618     738 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.9e-05
       VPS13   1 FlesLiakIldNlqvtiknvHiryeDslsvpg..........rpfalGitLesLsaqstdenwkptfi.kge..eseekivyKlvelesLavYwdsds. 85 
                 F+ ++++ I+d lqv+i+nv i ++ ++s+ +            ++l + +e++ ++ + e + +++  kge   +e+k   +lv+++++  Y++ +s 
  KHJ31087.1 189 FMFRFLQGITDRLQVKIHNVEIILKTDTSNGDpklsffsenaDSISLRLKIEEIDVKAVGE-YSDSVDtKGEasIKESKKKDRLVHISQIQGYLEFESn 286
                 7788999*****************97755222334444455599*************9988.5555443333444556777889999999999998774 PP

       VPS13  86 ...sedksledlslee.lee 101
                    s       l+ ++ +++
  KHJ31087.1 287 llsS-------LACSStTSQ 299
                 3330.......333332333 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.11
       VPS13  50 denwkptfikge..eseekivyKlvelesLavYwdsds.......s 86 
                 d+            + +++  +K+++l+++ +Y+           +
  KHJ31087.1 643 DS---------IerNITSRCSRKILSLDNIRIYLPGIDsestifeT 679
                 33.........123568999*************8633323244430 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       670  (0.0373696); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.05u 0.24s 00:00:01.29 Elapsed: 00:00:00.45
# Mc/sec: 14257.44
//
Query:       KHJ31088.1  [L=217]
Description: putative 60s ribosomal protein l1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-46  158.2   0.3    2.5e-46  158.0   0.3    1.0  1  Ribosomal_L1  Ribosomal protein L1p/L10e family


Domain annotation for each model (and alignments):
>> Ribosomal_L1  Ribosomal protein L1p/L10e family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.0   0.3   1.4e-50   2.5e-46       4     204 .]      23     212 ..      16     212 .. 0.95

  Alignments for each domain:
  == domain 1  score: 158.0 bits;  conditional E-value: 1.4e-50
                   HS-SSS--EEEEEEEESSS-TTSGGG--EEEEE-STSTSSCS-EEEEE-HHHHH...HHHHTT..-SEEETCHHHHHHT-HHHHHHTCCH-SEEEEE CS
  Ribosomal_L1   4 hakkkfdesveialnlttkkpkkadqrkpgkipLphplgkevkiclitkdpqaeyakeakeagriakviglkklkkkyksfeakrkllkefdlflad 100
                   ++k++f e+ve+++ l++++p++ d+r++g+i Lp   +  ++ic++ ++++ +    ak+ g   + ++ ++lkk  k+++  +kl+ ++d f+a+
    KHJ31088.1  23 TKKRNFLETVELQIGLKNYDPQR-DKRFSGTIRLPVIPRPAMSICVLGDQHDID---RAKHGG--IDAMSADDLKKLNKNKKLIKKLARKYDAFVAS 113
                   3488999*************666.99****************************...99****..******************************** PP

                   GGGHHHHHHHCHHHHGGGT-S-ECC..CT.BTS-HHHHHHHHCTTEEEEE-TTTSEEEEEEEETTSSHHHHHHHHHHHHHHHHHTSTTTSGSEEEEE CS
  Ribosomal_L1 101 drimpllpklLGkvfgkrkkmPipvltkgtvkedvkkevekalkstvvvrldkgtclsvkvGklsftaeelaeNieavvkalvekvpkkwkniksiy 197
                   d +++++p+lLG+ ++k++k+P+pv ++   ++d++++++++++ t++++l+k  c+ v++G++s+t+++l++Ni+ ++++lv+ ++k+w+n+ s++
    KHJ31088.1 114 DTLIKQIPRLLGPGLSKAGKFPTPV-SH---NDDLNNKLNEVKS-TIKFQLKKVLCMGVAIGNVSMTEDQLISNIMLAINYLVSLLKKGWQNVGSLT 205
                   *************************.43...79***********.**************************************************** PP

                   EEETTS- CS
  Ribosomal_L1 198 lkttmsp 204
                   +k +msp
    KHJ31088.1 206 IKASMSP 212
                   ******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1656.16
//
Query:       KHJ31089.1  [L=922]
Description: hypothetical protein EV44_g0577 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.76   10.1   3.8       0.22   11.8   0.2    1.9  2  DUF3082         Protein of unknown function (DUF3082)


Domain annotation for each model (and alignments):
>> DUF3082  Protein of unknown function (DUF3082)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.5      0.36   6.5e+03      54      69 ..       7      22 ..       5      23 .. 0.85
   2 ?   11.8   0.2   1.2e-05      0.22      19      64 ..     217     262 ..     214     267 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.36
     DUF3082 54 vvGlcyLatfvfgiva 69
                ++G+++L + vf +v+
  KHJ31089.1  7 LLGISVLLSLVFFLVS 22
                68999*******9987 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 1.2e-05
     DUF3082  19 vlyklttsiaatfarkplssdnqlvqriavavRtlvvGlcyLatfv 64 
                  ly l   i +tf+++p +s + + + i+++v tlv+  ++ +t++
  KHJ31089.1 217 SLYGLIPEIVHTFTSQPNPSAQAACAMIGAVVDTLVNVGVTAVTGM 262
                 689999******************************9777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (922 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1643  (0.0916392); expected 358.6 (0.02)
Passed bias filter:                      761  (0.0424452); expected 358.6 (0.02)
Passed Vit filter:                        96  (0.00535445); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.88u 0.29s 00:00:01.17 Elapsed: 00:00:00.43
# Mc/sec: 6437.56
//
Query:       KHJ31090.1  [L=548]
Description: putative mfs multidrug transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-35  122.0  68.5    1.2e-33  116.5  60.9    2.6  2  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.5  60.9   6.7e-38   1.2e-33       3     351 ..      72     470 ..      70     472 .. 0.91
   2 !   18.5   0.8   4.3e-08   0.00077     103     182 ..     437     524 ..     435     543 .. 0.81

  Alignments for each domain:
  == domain 1  score: 116.5 bits;  conditional E-value: 6.7e-38
       MFS_1   3 laaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlgaga 101
                 ++++l+ +  s ++++lp +++e+l+i p +  + +++++l+ a + l++Gr+sd +G  +v+++g l++a+++l++ f+ss  +l  +r+lqGlg +a
  KHJ31090.1  72 MSQILTEYFVSGFTVVLP-LISEELNIPPESSTWPASVFSLAVASFLLIFGRISDIYGGYPVYVAGCLWLAIWSLIGGFSSSDVMLNCCRALQGLGPAA 169
                 677888889999******.9*****************************************************99999*77777*************** PP

       MFS_1 102 lfpagaaliadwfpk.eergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee........... 188
                 ++p+++ ++  ++ + ++++  +++++a+  +G+ lg l++g+ a++  W + f+i ai+s+l++++++l +p +  ++  ++++              
  KHJ31090.1 170 FLPSSVMILGSIYRPgPRKNIIFSIYGACGPIGFFLGILFAGITAEYSVWGWFFWIGAIFSALSALIAYLTIPSDIQAKLSVRDQ--Vemdwlgsvfiv 266
                 ***************9*******************************99*****************7555554444444444444..3569******** PP

       MFS_1 189 ...........................................kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlglsgll 244
                                                            ++++ +pl+p   +++k p++ +l++al+l+f  f ++l+++++y++  +  s  +
  KHJ31090.1 267 gglflltfaiidsshalkgwrttyiystfitgsfllliacyveARVASQPLLP--ISFFKEPYMTALFVALILTFGSFGIFLFYSTFYMNYIMSAS-PF 362
                 *******************************************9999999999..7777777776899999999999999****************.79 PP

       MFS_1 245 laglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllll.vlvliGfglgfvfpsllalasdlappeeagtasglfn 342
                 ++ + ++ +a++g+i+a ++g +++ l+     ++++++ +++ l++a+++   +++ +++ +++++ +g  ++f  ++ +++ ++p++++g a ++++
  KHJ31090.1 363 QIIAWYSPMAVGGCIIATFGGLFLHLLPGTVLVTISGVSWIITPLLFAIAPQGANYWSYIFpSMICAPIGIDVTFNVANIFITTSLPKSKQGLAGAIIS 461
                 99999*******************999998888888888888888888888888888888877777999****************************** PP

       MFS_1 343 tagslggal 351
                 ++ +lg+a+
  KHJ31090.1 462 LLVHLGIAI 470
                 ******997 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 4.3e-08
       MFS_1 103 fpagaaliadwfpkeergraigllsagfslGailgpllggllasslg........Wravfyilaivsllafvlfllllpeepperkrk 182
                 f +++++i+   pk+++g+a +++s+ + lG+++  +++ ++ ++          ++avf++  + +  a+++  ++++ ++ e++  
  KHJ31090.1 437 FNVANIFITTSLPKSKQGLAGAIISLLVHLGIAIMLGFADIINTNSAaklsqrqsYHAVFWFEVASATTALLILTFFVRIKKAESELT 524
                 6788999************************************776689**************9999999887556655555555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (548 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.22s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4241.22
//
Query:       KHJ31091.1  [L=559]
Description: putative aar2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-49  169.7   0.2    1.7e-49  169.1   0.2    1.3  1  AAR2            AAR2 protein
  ------ inclusion threshold ------
      0.019   15.2   0.3      0.045   14.1   0.3    1.7  1  Ribosomal_L29e  Ribosomal L29e protein family


Domain annotation for each model (and alignments):
>> AAR2  AAR2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.1   0.2   1.9e-53   1.7e-49       2     351 ..     168     519 ..     167     520 .. 0.86

  Alignments for each domain:
  == domain 1  score: 169.1 bits;  conditional E-value: 1.9e-53
        AAR2   2 gatlllldlpegtefGiDlksftvgpk..FkGikmiPpGvHfvyysaasstselslrsgfffy......fkkgevivkkwdkeeEdLveelseeeaery 92 
                 g+++++ ++ ++t +G D+++ftv+++  F+G+++iP GvH+++ sa    ++ ++r gf++        + gevivk+wdk++  L ee+s  e++  
  KHJ31091.1 168 GDVIVIRGVDPNTIIGYDTVIFTVQEDklFEGLRDIPIGVHLIWGSA----NKEAFRQGFWIIssnrarLEYGEVIVKRWDKNSKVLDEEVSAAEVRIQ 262
                 6899*******************988779*****************9....567***************99************************9999 PP

        AAR2  93 kanlksiefdkkLapYpsdasek...........WksltshIteellerilpesgkisstaelasseseaesekkkawskssseeskgssakr.deeel 179
                 ++++   ef + L++   ++se+           W++lts I  +l+++i++                    +++++w +ss+++ k s++     ++ 
  KHJ31091.1 263 QQSIP--EFLQDLISCSDSSSEQfssslvkrptvWSDLTSSIRGSLITKITG--------------------NGWNDWLVSSTQKCKPSTNDGlHGNNA 339
                 99999..9***********9999*****************************....................789999999976666665443033333 PP

        AAR2 180 pslkskegtelrFteiplkrtwpegatgrelTkaalDkSwaLedllrksssgd.eaelLgElqfaFvlflllqnyssfeqWkrllsLlltceeaikerp 277
                   l++++  +++F   ++ r+++ +a+gre   +a+D+S   + + r ++++d ++e++gElqf++++ ++l+n  ++e+W  ++++++++  +  ++p
  KHJ31091.1 340 CVLSKDQVLNFTFPHSDN-RHYR-HAVGREQISQAIDTSGHVQAITRVKCDSDdPDEIIGELQFSYLTGICLKNPACVEHWAYIVKMVFQAFLIAIDEP 436
                 344444444444444455.5555.9**********************9999888********************************************* PP

        AAR2 278 dlfvkflrvLraqLkelpe....flsdivskdn....fLkkllkkfrenlee.....eeeeeeeesklkkelekLekllkekfgWdl 351
                 ++f kf+++ ++qL + +         i++ ++     +k+ l+ f+++l +     +++ +  ++++ k++e+Le++l  +++Wdl
  KHJ31091.1 437 KFFSKFIKAVHTQLIYDEGiegeS---ILDHEEtfrdDFKNILTVFKSRLTDlllqrGTNLTPDQKNVGKAFEDLESWLC-RWNWDL 519
                 **************9998844443...4444440111456777777777777***9977778899***************.*****9 PP

>> Ribosomal_L29e  Ribosomal L29e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.3     5e-06     0.045       3      25 ..     536     558 ..     535     559 .] 0.90

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 5e-06
  Ribosomal_L29e   3 KNhTnHNqsrKaHRNGIKkpksq 25 
                     K h++H +s+K  RNG K   ++
      KHJ31091.1 536 KSHSSHSKSKKTSRNGLKLSVGW 558
                     89****************98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (559 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.38
# Mc/sec: 4354.86
//
Query:       KHJ31092.1  [L=117]
Description: putative glycosylphosphatidylinositol anchor synthesis protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.6e-15   54.7   0.5    8.6e-15   54.7   0.5    2.3  2  DUF2423   Protein of unknown function (DUF2423)
     0.0091   16.2   0.2      0.016   15.5   0.2    1.8  1  MRP-S33   Mitochondrial ribosomal subunit S27
  ------ inclusion threshold ------
        4.3    8.4  12.1         48    5.0  11.8    2.4  1  HMG14_17  HMG14 and HMG17


Domain annotation for each model (and alignments):
>> DUF2423  Protein of unknown function (DUF2423)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   0.5   1.4e-18   8.6e-15       1      44 []       1      44 [.       1      44 [. 0.99
   2 ?    0.5   2.3      0.12   7.2e+02       4      14 ..      77      86 ..      77     100 .. 0.72

  Alignments for each domain:
  == domain 1  score: 54.7 bits;  conditional E-value: 1.4e-18
     DUF2423  1 MAKSlRSkskkraravkRksvFgpvedaRteRLsaKLkelakkp 44
                MAK++R++++k+ +a++R ++Fgp ++aRt+RLsaK++e a++p
  KHJ31092.1  1 MAKGARASTRKSKKAKLRCEIFGPEVTARTARLSAKILEIAAQP 44
                *****************************************997 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.12
     DUF2423  4 SlRSkskkrar 14
                S RSks + ++
  KHJ31092.1 77 STRSKSSR-NK 86
                88999987.44 PP

>> MRP-S33  Mitochondrial ribosomal subunit S27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.2   2.6e-06     0.016       7      33 ..      15      41 ..       9     111 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.6e-06
     MRP-S33  7 aklsarIFgevynptnlrtgsKvlrkr 33
                akl+++IFg  +  +++r ++K+l+  
  KHJ31092.1 15 AKLRCEIFGPEVTARTARLSAKILEIA 41
                89**********************864 PP

>> HMG14_17  HMG14 and HMG17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0  11.8     0.008        48      15      71 ..      24      82 ..       7     117 .] 0.67

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.008
    HMG14_17 15 eePkRRsarLSakpappkpEpkpkk..kssdkkkkekgkkgakgkqseeaneekkednp 71
                 e + R arLSak   + + pkp +  k+ + + ++  k+g+  + ++e  +  ++++ 
  KHJ31092.1 24 PEVTARTARLSAKILEIAAQPKPARctKEIEMEIEDSTKQGEDMEIDSEVLNASTRSKS 82
                47789********************6532333333333445555544443333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       674  (0.0375927); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.23s 00:00:00.57 Elapsed: 00:00:00.35
# Mc/sec: 1012.95
//
Query:       KHJ31093.1  [L=513]
Description: putative miz zinc finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.2e-38  130.2   0.4    1.4e-37  129.3   0.4    1.5  1  PINIT           PINIT domain
    2.3e-22   78.4   5.7    3.9e-22   77.7   5.7    1.4  1  zf-MIZ          MIZ/SP-RING zinc finger
    1.1e-06   28.3   1.1    3.1e-06   26.9   1.1    1.8  1  zf-Nse          Zinc-finger of the MIZ type in Nse subunit
  ------ inclusion threshold ------
       0.03   14.1   0.1      0.076   12.8   0.1    1.7  1  SAP             SAP domain
       0.03   14.4   0.7      0.078   13.0   0.5    1.8  1  zf-Sec23_Sec24  Sec23/Sec24 zinc finger
        1.9    8.7   4.4        3.6    7.8   4.4    1.5  1  zf-C3HC4_4      zinc finger of C3HC4-type, RING
        2.4    8.1   4.7        2.1    8.3   3.2    1.6  1  Prok-RING_4     Prokaryotic RING finger family 4
        3.8    7.4   6.4         14    5.6   6.0    2.1  2  zf-C3HC4_2      Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> PINIT  PINIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.3   0.4   6.1e-41   1.4e-37       2     144 ..     140     273 ..     139     275 .. 0.93

  Alignments for each domain:
  == domain 1  score: 129.3 bits;  conditional E-value: 6.1e-41
       PINIT   2 lrfkkspFYeileelskpteleasskkrnsvsfsfklse.eqveklakssrkekrvqyqlrlfcasedsksesseeqdiefPpqleikvNgkevkanlr 99 
                 +r+k+sp+Y+ +e+l+++++ e+++++r ++++s+++++ + ++++ +++ +     y++++f a+     e +++qdi+fP+q+e+kvNg evkanlr
  KHJ31093.1 140 IRIKQSPYYSFIEQLGSTVIFEVMATHRYTAKISLSVHQyPILNQI-SKEMD-----YRVMVFGAT-----EGQGPQDIAFPYQSELKVNGGEVKANLR 227
                 899**************************99999999998889999.55577.....******755.....5689************************ PP

       PINIT 100 glknkpGtarPvditkllrlspa.etNrieityaltkkkYylvvyl 144
                 glkn+pG++rPvdit+ lr +p  + N+ie+tya t+kkYyl+v++
  KHJ31093.1 228 GLKNRPGSTRPVDITDNLRYQPPnYVNNIEMTYAMTNKKYYLMVFV 273
                 ********************9988*******************997 PP

>> zf-MIZ  MIZ/SP-RING zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.7   5.7   1.7e-25   3.9e-22       1      49 [.     318     366 ..     318     367 .. 0.97

  Alignments for each domain:
  == domain 1  score: 77.7 bits;  conditional E-value: 1.7e-25
                 EESB-TTTSSB-SSEEEETT--SS--EEHHHHHHHHHHS---B-TTT-- CS
      zf-MIZ   1 vslkCplslsrikiPvrgekCkHlqCfdlesylelnertetWnCPvCsk 49 
                 +slkCpls++ri +P+r+  C+H+qCfd++syl+l+e+ +tW+CP+C++
  KHJ31093.1 318 LSLKCPLSTMRIDLPCRSFACRHMQCFDATSYLQLQEQGPTWSCPICNS 366
                 58*********************************************97 PP

>> zf-Nse  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   1.1   1.4e-09   3.1e-06       2      57 .]     310     365 ..     309     365 .. 0.93

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 1.4e-09
                 XXXXXSSBXXSB-TTTSSB-SSEEEESSS--E..EEHHHHHHHCTTTS-EE-SCCC-S CS
      zf-Nse   2 elaieeerislkCPltlqpfeePvtskkCpHv..FEreaIlelikrkktvkCPvagCs 57 
                 e++ + +  slkCPl+ + +  P +s +C+H+  F+ ++ l+l ++ +t  CP+  C+
  KHJ31093.1 310 EIVATASVLSLKCPLSTMRIDLPCRSFACRHMqcFDATSYLQLQEQGPTWSCPI--CN 365
                 67788899***********************666********************..86 PP

>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   3.4e-05     0.076      12      33 ..      31      52 ..      30      54 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.4e-05
                HHHHTT--TTS-HHHHHHHHHH CS
         SAP 12 eLkkrGLptsGkKaeLieRLke 33
                ++ + +L+  G+KaeL+ R++e
  KHJ31093.1 31 ICVQENLSKIGVKAELQNRIIE 52
                78999***************98 PP

>> zf-Sec23_Sec24  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.5   3.5e-05     0.078      14      31 ..     349     366 ..     331     371 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.5e-05
  zf-Sec23_Sec24  14 fckidfggkrwiCnfCnh 31 
                     + + +++g +w C++Cn+
      KHJ31093.1 349 YLQLQEQGPTWSCPICNS 366
                     5566************97 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   4.4    0.0016       3.6      13      42 .]     335     364 ..     322     364 .. 0.92

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0016
  zf-C3HC4_4  13 sleCGhsfClsCisslqkepdgeqllCplC 42 
                 s +C h  C+  +s lq +++g  ++Cp C
  KHJ31093.1 335 SFACRHMQCFDATSYLQLQEQGPTWSCPIC 364
                 679*************************** PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   3.2   0.00092       2.1      15      38 ..     337     366 ..     325     370 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00092
  Prok-RING_4  15 pCgHlvCkeCfdsk...dls......sCPlCqr 38 
                   C H+    Cfd++   +l+      sCP+C++
   KHJ31093.1 337 ACRHMQ---CFDATsylQLQeqgptwSCPICNS 366
                  355554...66665323555889********85 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.88     2e+03       7      23 ..      71      87 ..      70      92 .. 0.84
   2 ?    5.6   6.0    0.0063        14       1      40 []     321     364 ..     321     364 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.88
  zf-C3HC4_2  7 dmlkdpsvvtpCgHvfC 23
                +m+++psv+ + gH  +
  KHJ31093.1 71 AMIENPSVIPQNGHYSH 87
                69****99999999765 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0063
  zf-C3HC4_2   1 kCpiCldmlkdpsvvtpCgHvfCqkCilr.sLeekn...eCPlC 40 
                 kCp+   ++  p ++++C H  C +      L+e+    +CP+C
  KHJ31093.1 321 KCPLSTMRIDLPCRSFACRHMQCFDATSYlQLQEQGptwSCPIC 364
                 69999999999*************9887766776655789***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (513 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       707  (0.0394333); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3594.52
//
Query:       KHJ31094.1  [L=138]
Description: hypothetical protein EV44_g1299 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.025   14.1   0.3      0.049   13.2   0.3    1.4  2  4HB_MCP_1  Four helix bundle sensory module for signal transd


Domain annotation for each model (and alignments):
>> 4HB_MCP_1  Four helix bundle sensory module for signal transduction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.27   4.8e+03     116     130 ..      14      28 ..      10      32 .. 0.68
   2 ?   13.2   0.3   2.7e-06     0.049      48     112 ..      43     109 ..      40     116 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.27
   4HB_MCP_1 116 eqlnaYrevrkkvle 130
                 +++ +Y+++ +++ +
  KHJ31094.1  14 TSVSTYQDANQQLFD 28 
                 566777777777765 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 2.7e-06
   4HB_MCP_1  48 ikdlgeikanlrelradllelilt..kdkaekdellkdieeleaeidkllekyektilteeEkelle 112
                  k+l+e++++lr+lr+ + +l+     ++   + ll++ ++  +  +++++++ ++++ ee ++++ 
  KHJ31094.1  43 MKTLKEMHIQLRNLRTTIPRLLAPltLQHHAPQMLLEEFKQSIKTANQEIQEFQQLMMSEESSKIFC 109
                 68899999**********9999763256666999***************************999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1209  (0.0674327); expected 358.6 (0.02)
Passed bias filter:                      665  (0.0370907); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1026.40
//
Query:       KHJ31095.1  [L=568]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.17   11.8   0.7       0.43   10.6   0.7    1.7  1  DUF3783   Domain of unknown function (DUF3783)


Domain annotation for each model (and alignments):
>> DUF3783  Domain of unknown function (DUF3783)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.7   2.4e-05      0.43      27      55 ..     106     134 ..      82     135 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 2.4e-05
     DUF3783  27 iplkAvlTptNinWtlkeLleElekEhey 55 
                 +  +++++ +Ni+ tl  L+eE+ekE e+
  KHJ31095.1 106 RLMICTTVLSNIDSTLVNLHEEIEKEEEE 134
                 556799999*****************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       707  (0.0394333); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 4215.82
//
Query:       KHJ31096.1  [L=698]
Description: putative tip elongation protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-14   53.9   0.2    3.4e-14   52.6   0.2    1.8  1  CAP_GLY          CAP-Gly domain
    1.4e-05   24.8   8.5    0.00015   21.5   1.3    2.6  2  CLIP1_ZNF        CLIP1 zinc knuckle
  ------ inclusion threshold ------
      0.015   14.2  28.8      0.013   14.4   8.2    2.5  3  Spc7             Spc7 kinetochore protein
      0.016   15.0   3.2       0.27   11.1   0.2    2.5  2  Glutaredoxin2_C  Glutaredoxin 2, C terminal domain
      0.063   13.1   1.1         13    5.5   0.2    3.2  3  IL31             Interleukin 31
       0.31   10.8   2.9        5.6    6.8   0.3    2.4  2  zf-CCHC_4        Zinc knuckle
        0.4   11.2   5.0       0.51   10.8   0.8    2.9  2  NPV_P10          Nucleopolyhedrovirus P10 protein
       0.98    9.7  14.1        0.4   11.0   2.2    3.2  3  YlbD_coat        Putative coat protein
        2.5    5.5  26.0          2    5.8  15.6    2.0  2  DUF3584          Protein of unknown function (DUF3584)
        4.1    7.8  28.4       0.11   13.0  14.7    3.1  3  Fez1             Fez1
        5.3    7.4   6.0        1.9    8.8   0.4    3.0  2  DUF948           Bacterial protein of unknown function (DUF94
        5.6    6.1  10.2          7    5.8   2.4    2.4  2  ISG65-75         Invariant surface glycoprotein
        6.2    6.9  26.4        6.5    6.8  10.5    3.4  3  TPR_MLP1_2       TPR/MLP1/MLP2-like protein
        6.3    6.1  15.8      0.027   13.9   4.4    2.3  2  Phlebovirus_NSM  Phlebovirus nonstructural protein NS-M
        9.3    7.0  17.0         13    6.5   1.2    3.7  3  YabA             Initiation control protein YabA


Domain annotation for each model (and alignments):
>> CAP_GLY  CAP-Gly domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.2   2.9e-17   3.4e-14       1      64 [.      13      80 ..      13      81 .. 0.91

  Alignments for each domain:
  == domain 1  score: 52.6 bits;  conditional E-value: 2.9e-17
     CAP_GLY  1 vgdrvklkegrrGvvryvGpvpfakgewvGveldep...nGkndGsvkgkrYFe.ckpnrGvFvrpek 64
                +gd+v+++++ +G v+++G+v+++kg++vGvel e+   +Gkn G v+g  YF  + p+ G+F++ ++
  KHJ31096.1 13 LGDMVEVPGKMHGNVKFIGTVDNKKGIFVGVELSEEfasRGKNSGDVDGLSYFVtTIPGAGIFLPINR 80
                5999*999*************************9966779*************7367******99876 PP

>> CLIP1_ZNF  CLIP1 zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   1.0    0.0043       5.1       3      14 ..     611     622 ..     610     625 .. 0.89
   2 !   21.5   1.3   1.3e-07   0.00015       2      17 .]     677     692 ..     677     692 .. 0.98

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0043
   CLIP1_ZNF   3 YCdnCEvFGHdT 14 
                 +C++CE  GHd+
  KHJ31096.1 611 FCELCETPGHDI 622
                 8********997 PP

  == domain 2  score: 21.5 bits;  conditional E-value: 1.3e-07
   CLIP1_ZNF   2 pYCdnCEvFGHdTedC 17 
                 ++C+ CE++GH+ +dC
  KHJ31096.1 677 KWCAVCERDGHESIDC 692
                 7*************** PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   8.2   1.1e-05     0.013     177     278 ..     229     329 ..     225     351 .. 0.85
   2 ?    7.9  11.4     0.001       1.2     156     260 ..     324     431 ..     323     445 .. 0.76
   3 ?    6.3  10.5    0.0031       3.7     143     236 ..     364     456 ..     359     493 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.1e-05
        Spc7 177 aeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwsesevsrlkeev 275
                 ++l ++++ +    ++  ++ ++++e+   + +++++e +++++ l e+ +ql+e++ ++ee+++  +e+++ i + ++ + ++ ++++ +v +l++ +
  KHJ31096.1 229 TQLDQRATPIDFSTAK-INSAQTNIESSTCSKVSVNEENSRLRALLVERDRQLKEQAISLEEMEKALAEVQKLIDSDNNCRTKRNSIEDRDVFQLRAML 326
                 5555555555554544.456899999999999****************************************************************998 PP

        Spc7 276 kal 278
                 ++ 
  KHJ31096.1 327 REK 329
                 765 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.001
        Spc7 156 elLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelree...laelkaeieekkkelaelqeqleeleekieelkeqkseleeeia 251
                 ++L +++e++  l  e+++++a+ ++++++l+ a+ e e + ++++ e+ +e   l+++++++++  + l++l+e ++elee +ee++    e++ e++
  KHJ31096.1 324 AMLREKNEKIYMLTTEFDAHRADFRSTIDTLEMASSETERVYEQRISEMMQEindLSSQSVDVNNVANHLKQLEELVQELEEGLEEARRAEVEARGEVE 422
                 578899999999999999999999999999999999999998888888877622256788889999999999999999999999888777777777776 PP

        Spc7 252 eaervleec 260
                   +  +e++
  KHJ31096.1 423 FLRGEVERT 431
                 544444443 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.0031
        Spc7 143 gleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleeki 236
                 ++e++++++ ++ + L++q   ++++ + l++  +el +ele+  e+a+  e   + e+e lr e+++  ae+++ k++ ++      ++++ +
  KHJ31096.1 364 VYEQRISEMMQEINDLSSQSVDVNNVANHLKQL-EELVQELEEGLEEARRAEVEARGEVEFLRGEVERTRAELKREKEKASRDSIGTGSIANGV 456
                 67899999***********99999999999765.556666666555566667777999999999999999999988888776655555555555 PP

>> Glutaredoxin2_C  Glutaredoxin 2, C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   0.00022      0.27      50      96 ..     277     323 ..     266     333 .. 0.87
   2 ?    3.9   0.2     0.038        46      27      77 ..     354     403 ..     348     412 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00022
  Glutaredoxin2_C  50 eellaktpeliaelnalLeelepliksseavng.elSvdDillfpiLr 96 
                      ++ l++++  ++e+++ L+e+++li+s++++ +   S++D ++f  Lr
       KHJ31096.1 277 DRQLKEQAISLEEMEKALAEVQKLIDSDNNCRTkRNSIEDRDVFQ-LR 323
                      6789999999*********************99999****99994.44 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.038
  Glutaredoxin2_C  27 pEFatqsAreyftkkkeksigdfeellaktpeliaelnalLeeleplikss 77 
                       E a+ +  + + ++ ++++++ ++l +++ + ++++ ++L++le+l+++ 
       KHJ31096.1 354 LEMASSETERVYEQRISEMMQEINDLSSQSVD-VNNVANHLKQLEELVQEL 403
                      57788888899999999999999888777766.678888999999999754 PP

>> IL31  Interleukin 31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.031        37      41      93 ..     159     211 ..     151     221 .. 0.90
   2 ?    5.5   0.2     0.011        13      44      93 ..     348     397 ..     313     405 .. 0.79
   3 ?   -0.8   0.1         1   1.2e+03      14     105 ..     472     494 ..     459     519 .. 0.58

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.031
        IL31  41 esesyqlpcltsdreapnninssailaylkaikplldnksdideiieqLkklk 93 
                 +++s++ p l+++ ++p++   s+++ + ++++   d ++ +++ii   + l+
  KHJ31096.1 159 NQNSLKSPNLSPNGKTPTKYGNSSMKKFRQSVRGTQDSRDPVKKIIGTPRSLN 211
                 578999****************************************8766665 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.011
        IL31  44 syqlpcltsdreapnninssailaylkaikplldnksdideiieqLkklk 93 
                 + ++ +l + +   +++    i   +++i+ l+++ +d++++ ++Lk+l+
  KHJ31096.1 348 RSTIDTLEMASSETERVYEQRISEMMQEINDLSSQSVDVNNVANHLKQLE 397
                 5556666667777778888899999**********************996 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1
        IL31  14 lkkiikeL.kslskklledyekkekGvsesesyqlpcltsdreapnninssailaylkaikplldnksdideiieqLkklklqnepevnisvP 105
                 lkkii+ L + ++++l ed +                                                                      +P
  KHJ31096.1 472 LKKIIHSLsRDSVQDLVEDIS----------------------------------------------------------------------MP 494
                 455555552233345555544......................................................................33 PP

>> zf-CCHC_4  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.3    0.0047       5.6      32      48 ..     610     626 ..     609     627 .. 0.92
   2 ?    4.1   0.1     0.033        40      33      48 ..     678     693 ..     675     694 .. 0.89

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0047
   zf-CCHC_4  32 sfCyiCgvlGHsdkrCd 48 
                 sfC+ C   GH++  C+
  KHJ31096.1 610 SFCELCETPGHDILICS 626
                 8************9998 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.033
   zf-CCHC_4  33 fCyiCgvlGHsdkrCd 48 
                  C +C + GH+  +C+
  KHJ31096.1 678 WCAVCERDGHESIDCP 693
                 6**********99998 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.2       0.8   9.6e+02      41      66 ..     277     302 ..     242     308 .. 0.79
   2 ?   10.8   0.8   0.00043      0.51      17      60 ..     366     409 ..     362     416 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.8
     NPV_P10  41 nekLdaqsaqLaeletkvenIqdiLn 66 
                   +L +q+ +L+e+e+++ ++q++  
  KHJ31096.1 277 DRQLKEQAISLEEMEKALAEVQKLID 302
                 46788888999999998888887665 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00043
     NPV_P10  17 ddkVdalqqqvddvqenlpdvtelnekLdaqsaqLaeletkven 60 
                 +++++ + q+++d+++++ dv+++ ++L ++ + ++ele+ +e+
  KHJ31096.1 366 EQRISEMMQEINDLSSQSVDVNNVANHLKQLEELVQELEEGLEE 409
                 6899999*******************************997765 PP

>> YlbD_coat  Putative coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.8     0.021        25      77     119 ..     278     318 ..     239     325 .. 0.59
   2 ?   11.0   2.2   0.00033       0.4      38     103 ..     341     408 ..     323     422 .. 0.70
   3 ?    0.3   0.1      0.67   8.1e+02      61      88 ..     461     488 ..     423     535 .. 0.61

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.021
   YlbD_coat  77 kkldvdklqehlnqlskalasvqelikqfqekkqkekqkkekk 119
                 ++l        l++++kala+vq+li + ++ ++k+++ ++++
  KHJ31096.1 278 RQLKE--QAISLEEMEKALAEVQKLIDSDNNCRTKRNSIEDRD 318
                 33333..333699*************98777777755555555 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00033
   YlbD_coat  38 deiweeykekeeekkesksekkk.keekkkdllsqllnll.kkldvdklqehlnqlskalasvqelik 103
                 d + ++++++ ++ + ++se+++  e++ +++++++ +l  + +dv+++ +hl+ql++ +++++e ++
  KHJ31096.1 341 DAHRADFRSTIDTLEMASSETERvYEQRISEMMQEINDLSsQSVDVNNVANHLKQLEELVQELEEGLE 408
                 55555666444333333333333478888999999999862579***************999987655 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.67
   YlbD_coat  61 keekkkdllsqllnllkkldvdklqehl 88 
                 + ++++d +  l ++++ l  d +q+ +
  KHJ31096.1 461 ELKQRDDEIRGLKKIIHSLSRDSVQDLV 488
                 3334444444444444444444444444 PP

>> DUF3584  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   3.0    0.0024       2.9     461     536 ..     229     304 ..     217     310 .. 0.89
   2 ?    5.8  15.6    0.0017         2     291     524 ..     317     552 ..     305     556 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0024
     DUF3584 461 tateEeleqieeadealekaqeelekaeaevealqaeeeqlrkkrdeadealqkaerrleqlrqaleeleeqlsPq 536
                 t+ +   + i  + ++++ aq ++e+++ ++ + ++e+ +lr+   e d++l++ + +le+  +al+e+++ ++ +
  KHJ31096.1 229 TQLDQRATPIDFSTAKINSAQTNIESSTCSKVSVNEENSRLRALLVERDRQLKEQAISLEEMEKALAEVQKLIDSD 304
                 5555666777788999******************************************************998766 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0017
     DUF3584 291 elkqqlrtledelkeaidelnqelsaakaklaakeselealeeqkkkyedadieklkadldqlpsirseleeleeeldaltekhqdvqekydrrkqkik 389
                 +  +qlr++  e +e+i  l+ e  a +a+     + le + ++ ++  +++i+++ ++ + l s + +++++ ++l+ l+e +q+++e +++ +  ++
  KHJ31096.1 317 RDVFQLRAMLREKNEKIYMLTTEFDAHRADFRSTIDTLEMASSETERVYEQRISEMMQEINDLSSQSVDVNNVANHLKQLEELVQELEEGLEEARR-AE 414
                 5567899999999**********************************99*****************************************987664.45 PP

     DUF3584 390 eeleeeleklkerleaireekdrlkaaieeal....ealesqlrkqleaqkeelneeekelesrlselklrldsatateEeleqieeadealekaqeel 484
                  e   e+e l+ ++e +r e +r k++++ +     +  +   ++++ +q  +  +  k++ ++ls+  ++     ++   +     + e ++ a+++ 
  KHJ31096.1 415 VEARGEVEFLRGEVERTRAELKREKEKASRDSigtgSIANGVVVSKELKQRDDEIRGLKKIIHSLSRDSVQDLVEDISMPSTRLSSSFSEGIKLAESKR 513
                 556666777777777777776666655555541111333334455555555556667888999999999988888888888888888888898888887 PP

     DUF3584 485 ekaeaevealqaeeeqlrkkrdeadealqkaerrleqlrq 524
                  + + ++ + ++  +++++k + a e +q+  +  +++r 
  KHJ31096.1 514 DSKNMKRDSVET-SQNFDSKTNAAGELHQEGGDINQESRG 552
                 777666666654.578999999999999988877777765 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   5.0     0.059        70      62     162 ..     253     344 ..     213     348 .. 0.45
   2 ?   13.0  14.7   8.9e-05      0.11      31     153 ..     317     444 ..     298     448 .. 0.66
   3 ?    2.5   0.2      0.15   1.8e+02      47     135 ..     462     531 ..     454     611 .. 0.55

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.059
        Fez1  62 eektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaalesdeakaqrqeaeeleelkreverlraeLkeerqkkeeqassFeq 160
                 e+ t +   +       ++e++ lr  + + +++lke   +l+e+++  +e ++  d+ ++ r  +++ + ++r+v +lra L+e+++k    +++F+ 
  KHJ31096.1 253 ESSTCSKVSV-------NEENSRLRALLVERDRQLKEQAISLEEMEKALAEVQKLIDSDNNCR--TKRNSIEDRDVFQLRAMLREKNEKIYMLTTEFDA 342
                 2222222222.......2222222222222222222222222222222222222222211222..3344556677777777777777777777777777 PP

        Fez1 161 ER 162
                  R
  KHJ31096.1 343 HR 344
                 66 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 8.9e-05
        Fez1  31 seivalkaqlrelrakleekeeeikeleesleektlelevcenelqrk.....kseaellrekveklee...elkelreelselsleeeeaalesdeak 121
                  ++++l+a lre ++k+    +e + +++ +++  + le   +e +r      +   e+++e ++ l++   +++++ ++l++l++  +e ++  +ea+
  KHJ31096.1 317 RDVFQLRAMLREKNEKIYMLTTEFDAHRADFRSTIDTLEMASSETERVyeqriS---EMMQE-INDLSSqsvDVNNVANHLKQLEELVQELEEGLEEAR 411
                 4789******************************99999999999998653331...33333.444444000344444444444433333333333333 PP

        Fez1 122 .aqrqeaeeleelkreverlraeLkeerqkkee 153
                  a+ +++ e+e l+ ever raeLk e++k  +
  KHJ31096.1 412 rAEVEARGEVEFLRGEVERTRAELKREKEKASR 444
                 03334478999*****************98765 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.15
        Fez1  47 leekeeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaa.lesdeakaqrqeaeeleelkr 135
                 l+++++ei+ l+                    k  ++l r+ v+ l e+++   ++ls++ +e  + a ++ d+++++r++ e++++ ++
  KHJ31096.1 462 LKQRDDEIRGLK--------------------KIIHSLSRDSVQDLVEDISMPSTRLSSSFSEGIKLAeSKRDSKNMKRDSVETSQNFDS 531
                 222233333322....................3334444444444444444444444443333333221222222233333222222222 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1       1.4   1.7e+03      51      74 ..     278     301 ..     258     313 .. 0.57
   2 ?    8.8   0.4    0.0016       1.9      35      88 ..     351     404 ..     319     406 .. 0.57

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1.4
      DUF948  51 dllakvnelledvneklekvdplt 74 
                 + l++    le++++ l++v++l+
  KHJ31096.1 278 RQLKEQAISLEEMEKALAEVQKLI 301
                 444444444444444444444444 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0016
      DUF948  35 ieelekqvdpilkevedllakvnelledvneklekvdplteavadlgesvseln 88 
                 i++le    ++ +  e+ ++++ +  +d+++++ +v+++ +++++l e v+el+
  KHJ31096.1 351 IDTLEMASSETERVYEQRISEMMQEINDLSSQSVDVNNVANHLKQLEELVQELE 404
                 333332222222222333333333333345577777777777777777776664 PP

>> ISG65-75  Invariant surface glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   1.1     0.014        16      56     119 ..     245     308 ..     235     319 .. 0.83
   2 ?    5.8   2.4    0.0058         7      55     121 ..     378     444 ..     355     490 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.014
    ISG65-75  56 lketkdklayienakekvdyyvekleslleeakekgtltesdaeklkkaceeAkaknkkareka 119
                 +++++ ++++    k +v+++ ++l++ll e++ + + ++   e+++ka++e+++ ++++++  
  KHJ31096.1 245 INSAQTNIESSTCSKVSVNEENSRLRALLVERDRQLKEQAISLEEMEKALAEVQKLIDSDNNCR 308
                 5667778888888999***************988888888888999*********999987655 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0058
    ISG65-75  55 llketkdklayienakekvdyyvekleslleeakekgtltesdaeklkkaceeAkaknkkarekakk 121
                 +l++   ++++++n+++++++ v++le+ leea+  +     ++e l+ ++e + a+ k ++eka  
  KHJ31096.1 378 DLSSQSVDVNNVANHLKQLEELVQELEEGLEEARRAEVEARGEVEFLRGEVERTRAELKREKEKASR 444
                 4445555677788888888888888888888887777777777788888888888888877777754 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   5.0       1.6   1.9e+03      62      96 ..     262     296 ..     240     317 .. 0.43
   2 ?    6.8  10.5    0.0054       6.5       7     118 ..     273     382 ..     259     384 .. 0.81
   3 ?    3.9   6.5     0.043        51      55     109 ..     389     443 ..     383     446 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.6
  TPR_MLP1_2  62 lreelnelkaeiaelkaeaesakaeleeseeswee 96 
                 ++ee ++l+a + e   ++++   +lee e++++e
  KHJ31096.1 262 VNEENSRLRALLVERDRQLKEQAISLEEMEKALAE 296
                 22222222222222222222222222222222222 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0054
  TPR_MLP1_2   7 eeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekel 105
                   e ++ ++e++ + ++++k+  +++k  ++ ++     +r  ++  +  +  + lre+ +++    +e+ a + + ++++++ e + +e++  +e+++
  KHJ31096.1 273 LVERDRQLKEQAISLEEMEKALAEVQKLIDSDNNCRT--KRNSIEDRDVFQLRAMLREKNEKIYMLTTEFDAHRADFRSTIDTLEMASSETERVYEQRI 369
                 4444555555555555666666666666666666666..78888888888888999******************************************* PP

  TPR_MLP1_2 106 selekriedlneq 118
                 se+ + i+dl++q
  KHJ31096.1 370 SEMMQEINDLSSQ 382
                 ***********99 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.043
  TPR_MLP1_2  55 dvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelsele 109
                  ++ l++l e ++el++ ++e++ +  +a+ e+e  + + e+++ el++e++++ 
  KHJ31096.1 389 VANHLKQLEELVQELEEGLEEARRAEVEARGEVEFLRGEVERTRAELKREKEKAS 443
                 5677888888888888888888888888888888888888888888888888875 PP

>> Phlebovirus_NSM  Phlebovirus nonstructural protein NS-M
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   4.3       3.2   3.8e+03     197     221 ..     330     354 ..     244     395 .. 0.44
   2 ?   13.9   4.4   2.2e-05     0.027     138     236 ..     381     480 ..     375     495 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.2
  Phlebovirus_NSM 197 krdakklveesmArvkdlkeelkil 221
                      ++ +  l+ e +A  +d++     l
       KHJ31096.1 330 NEKIYMLTTEFDAHRADFRSTIDTL 354
                      2222222333333333333333222 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 2.2e-05
  Phlebovirus_NSM 138 lgrvdyeklkkkaeekdktisrktkesEediknqv.lhseieqlknelqkkRndikrgqekrdakklveesmArvkdlkeelkiltdelsqiks 230
                      +  vd +++ ++ ++ +++++   +  Ee  ++ v +  e+e l++e+++ R ++kr +ek + + ++  s A    + +elk+  de++ +k+
       KHJ31096.1 381 SQSVDVNNVANHLKQLEELVQELEEGLEEARRAEVeARGEVEFLRGEVERTRAELKREKEKASRDSIGTGSIANGVVVSKELKQRDDEIRGLKK 474
                      556899999999999999999988999999999995678**********************************9999****************9 PP

  Phlebovirus_NSM 231 eiqilr 236
                       i++l 
       KHJ31096.1 475 IIHSLS 480
                      998874 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   1.2     0.011        13       9      76 ..     230     297 ..     226     302 .. 0.84
   2 ?    6.3   4.7     0.012        15       2      62 ..     385     445 ..     359     456 .. 0.83
   3 ?   -0.7   0.0       1.8   2.2e+03      16      53 ..     461     516 ..     456     554 .. 0.45

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.011
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXXXXXXX CS
        YabA   9 kleeleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekekkkelsegkenLarl 76 
                 +l++  + ++  ++++++ ++++++ +    +++ en++lr +l e++++ ke+  +l+e ++ La++
  KHJ31096.1 230 QLDQRATPIDFSTAKINSAQTNIESSTCSKVSVNEENSRLRALLVERDRQLKEQAISLEEMEKALAEV 297
                 5666666677788999999999999999****************999999999999999988888765 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.012
                 -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXX CS
        YabA   2 dkkelfdkleeleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekek 62 
                 d +++ ++l++lee ++el e lee +++ +e   e + L+ e e+ r +l++e++k++++
  KHJ31096.1 385 DVNNVANHLKQLEELVQELEEGLEEARRAEVEARGEVEFLRGEVERTRAELKREKEKASRD 445
                 5577888999999999999999999999999999999999999999999996555554443 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 1.8
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.....HHHHHHHH.................X CS
        YabA  16 qleelleeleelkeelaelleenaeLele.....neklrerl.................e 53 
                 +l++  +e++ lk+ +++l  +  +  +e      ++    l                 +
  KHJ31096.1 461 ELKQRDDEIRGLKKIIHSLSRDSVQDLVEdismpSTR----LsssfsegiklaeskrdsK 516
                 5555556666666666655554433223311111222....2333355555543333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (698 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1505  (0.0839422); expected 358.6 (0.02)
Passed bias filter:                      585  (0.0326287); expected 358.6 (0.02)
Passed Vit filter:                        94  (0.0052429); expected 17.9 (0.001)
Passed Fwd filter:                        35  (0.00195214); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.91u 0.29s 00:00:01.20 Elapsed: 00:00:00.44
# Mc/sec: 4765.95
//
Query:       KHJ31097.1  [L=354]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       712  (0.0397122); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2488.70
//
Query:       KHJ31098.1  [L=239]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 1932.10
//
Query:       KHJ31099.1  [L=439]
Description: putative guanyl-specific ribonuclease f1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.027   14.1   0.8       0.32   10.7   0.2    2.4  2  zf-Tim10_DDP  Tim10/DDP family zinc finger
       0.13   12.7   0.0       0.26   11.7   0.0    1.5  1  FumaraseC_C   Fumarase C C-terminus


Domain annotation for each model (and alignments):
>> zf-Tim10_DDP  Tim10/DDP family zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.2   3.5e-05      0.32      12      42 ..      61      90 ..      57      98 .. 0.80
   2 ?    1.0   0.0     0.037   3.3e+02      47      59 ..     324     336 ..     298     338 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 3.5e-05
  zf-Tim10_DDP 12 aqelvnkltekCfkkCigkypgssLdssees 42
                  + +++ ++t++ ++kCi+k  +s++ ss +s
    KHJ31099.1 61 IIDVIARITNNHHTKCIKK-DSSQMESSSSS 90
                  668999***********55.77777776654 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.037
  zf-Tim10_DDP  47 Cvdryldvsnlvs 59 
                   Cvdr + ++ l+ 
    KHJ31099.1 324 CVDRIFSSNDLIR 336
                   9******999985 PP

>> FumaraseC_C  Fumarase C C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.9e-05      0.26      12      43 ..     231     273 ..     230     279 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.9e-05
                  HHHHHHHHHHHHHT--HHHHHHHTT-............-HHHH CS
  FumaraseC_C  12 ekAakIAkeAlkegktlreavlelgl...........lteeel 43 
                  ekAa++Ak+ ++++k++  ++l +g            ltee+l
   KHJ31099.1 231 EKAAEVAKDVFNNRKKIEKVTLHHGDpfnepfylwpiLTEERL 273
                  89********************999766666677777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3240.07
//
Query:       KHJ31100.1  [L=343]
Description: hypothetical protein EV44_g0064 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2620.07
//
Query:       KHJ31101.1  [L=118]
Description: hypothetical protein EV44_g4310 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0001   22.2   0.1    0.00017   21.4   0.1    1.4  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.1   9.5e-09   0.00017      62     118 ..       2      57 ..       1      58 [. 0.83

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 9.5e-09
  Exo_endo_phos_2  62 efleehslsllnllksgptfkssngsstiDltltsdnlals...kleleeedlgSDHrpi 118
                      e+l++++ s +++ + +pt+++    +++Dl+++s++l+ +   +  +++ d++SDH+pi
       KHJ31101.1   2 EWLDAKNFSFISEID-TPTHNR---GNVLDLCFSSNSLLAKgctASVQQDLDVTSDHLPI 57 
                      788999999888877.666644...599*************99877788889******99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       248  (0.0138323); expected 358.6 (0.02)
Passed bias filter:                      228  (0.0127168); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.26s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 903.57
//
Query:       KHJ31102.1  [L=224]
Description: putative galactoside o-acetyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-13   49.4  11.8    4.5e-10   38.9   5.0    3.5  4  Hexapep    Bacterial transferase hexapeptide (six repeats)
    5.9e-13   48.3  12.8    5.3e-10   38.9   4.9    3.4  3  Hexapep_2  Hexapeptide repeat of succinyl-transferase
    1.6e-08   34.6   0.5    2.7e-08   33.9   0.5    1.3  1  Mac        Maltose acetyltransferase
  ------ inclusion threshold ------
      0.032   14.3   0.0        8.7    6.5   0.0    2.3  2  RPN1_C     26S proteasome non-ATPase regulatory subunit RPN1 


Domain annotation for each model (and alignments):
>> Hexapep  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0   0.00051       2.3      17      33 ..      94     110 ..      94     113 .. 0.85
   2 !    5.1   0.0    0.0045        20       3      15 ..     118     130 ..     117     131 .. 0.77
   3 !   38.9   5.0     1e-13   4.5e-10       2      36 .]     155     189 ..     154     189 .. 0.95
   4 ?   -3.1   0.0       1.7   7.6e+03      13      19 ..     194     200 ..     192     200 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00051
                 ETTEEE-TTEEEETTEE CS
     Hexapep  17 ggnVkIGdnvkIgagvv 33 
                 g+nVk+G++v I  +++
  KHJ31102.1  94 GDNVKLGKGVFINFNCT 110
                 68999999999999987 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0045
                 EEETTEEE-TTEE CS
     Hexapep   3 vIGsnvlIgpfav 15 
                 +IGs +l+gp++ 
  KHJ31102.1 118 TIGSRTLVGPNCS 130
                 6888889888885 PP

  == domain 3  score: 38.9 bits;  conditional E-value: 1e-13
                 EEEETTEEE-TTEEEETTEEE-TTEEEETTEEEES CS
     Hexapep   2 tvIGsnvlIgpfaviggnVkIGdnvkIgagvvigg 36 
                 + IG+++++g +++++++V+IG++v++gag+v+++
  KHJ31102.1 155 ISIGEDCWLGGNVIVCPGVTIGRGVTVGAGSVVTK 189
                 57*******************************86 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 1.7
                 TEEEETT CS
     Hexapep  13 faviggn 19 
                 f+v++gn
  KHJ31102.1 194 FCVVAGN 200
                 7888876 PP

>> Hexapep_2  Hexapeptide repeat of succinyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.2    0.0034        15      21      32 ..      94     105 ..      91     106 .. 0.90
   2 !    7.7   0.0   0.00067         3       2      14 ..     117     129 ..     117     131 .. 0.92
   3 !   38.9   4.9   1.2e-13   5.3e-10       1      34 []     154     189 ..     154     189 .. 0.97

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0034
                 -TT-EE-TT-EE CS
   Hexapep_2  21 GdncvvgaGvvi 32 
                 Gdn+++g Gv+i
  KHJ31102.1  94 GDNVKLGKGVFI 105
                 9*********99 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00067
                 EEE-TT-EE-TT- CS
   Hexapep_2   2 viIGdnCliGana 14 
                 ++IG ++l+G+n+
  KHJ31102.1 117 ITIGSRTLVGPNC 129
                 68**********9 PP

  == domain 3  score: 38.9 bits;  conditional E-value: 1.2e-13
                 .EEE-TT-EE-TT-EE..SEEE-TT-EE-TT-EE-S CS
   Hexapep_2   1 pviIGdnCliGanagi..GvslGdncvvgaGvvita 34 
                 p++IG++C +G n ++  Gv++G++++vgaG+v+t+
  KHJ31102.1 154 PISIGEDCWLGGNVIVcpGVTIGRGVTVGAGSVVTK 189
                 89*************88******************7 PP

>> Mac  Maltose acetyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.5     6e-12   2.7e-08       1      48 [.      12      58 ..      12      61 .. 0.88

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 6e-12
                HHHTTS-BETTTSHHHHHHHHHHHHHHHHHHTSTTT-HHHHHHHHHHH CS
         Mac  1 KMlaGelYdafsDpeLvaeRlrarelcrryNqtrpsdkdeRrelLrel 48
                +Ml GelY af  p L+ +R+r++ +c ++N++ +  + +R +l r +
  KHJ31102.1 12 RMLKGELYMAF-TPNLISMRKRCQLACEKFNSRKELSRRQRVKLWRNI 58
                8*********8.5******************97777777788888876 PP

>> RPN1_C  26S proteasome non-ATPase regulatory subunit RPN1 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0    0.0044        20      18      37 ..      23      42 ..      20      46 .. 0.90
   2 ?    6.5   0.0    0.0019       8.7      17      41 ..      86     110 ..      84     118 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0044
      RPN1_C 18 tPVlLaageRAELateeYip 37
                tP l+++  R +La e++ +
  KHJ31102.1 23 TPNLISMRKRCQLACEKFNS 42
                9****************976 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0019
      RPN1_C  17 ttPVlLaageRAELateeYiplssv 41 
                 +tPV++ +g+  +L++  +i ++ +
  KHJ31102.1  86 ETPVMVDYGDNVKLGKGVFINFNCT 110
                 6***************999987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1652.62
//
Query:       KHJ31103.1  [L=1403]
Description: putative calcium transporting atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.3e-39  133.8  12.2    5.3e-39  133.8  12.2    2.8  3  Cation_ATPase_C  Cation transporting ATPase, C-terminus
    2.5e-35  121.6   0.6    2.5e-35  121.6   0.6    3.1  2  E1-E2_ATPase     E1-E2 ATPase
    3.8e-23   81.4   0.0    1.2e-22   79.8   0.0    1.9  2  Cation_ATPase    Cation transport ATPase (P-type)
    2.7e-20   73.6   0.0    6.4e-20   72.3   0.0    1.7  1  Hydrolase        haloacid dehalogenase-like hydrolase
    2.2e-05   24.0   0.0    6.1e-05   22.6   0.0    1.8  1  Cation_ATPase_N  Cation transporter/ATPase, N-terminus
    2.4e-05   24.2   0.5    0.00041   20.2   0.3    2.6  2  Hydrolase_3      haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.023   15.0   0.0         11    6.2   0.0    2.7  2  RskA             Anti-sigma-K factor rskA


Domain annotation for each model (and alignments):
>> Cation_ATPase_C  Cation transporting ATPase, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.3      0.11   2.9e+02     115     176 ..     315     375 ..     308     381 .. 0.50
   2 ?   -3.6   0.1         3   7.7e+03     158     172 ..     566     580 ..     530     589 .. 0.49
   3 !  133.8  12.2   2.1e-42   5.3e-39       2     182 .]    1053    1229 ..    1052    1229 .. 0.94

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.11
  Cation_ATPase_C 115 slfkfsglfsnkllllaillslllqvlivyvpglnavfgtaplsleewlialllalvvllvd 176
                      +l++++ ++ n  +l+ + +++++ +++ +++ +++  + + + + ew+  l++ +++++v+
       KHJ31103.1 315 NLLQLMWITYNDKVLILLSIAATVSLAVGLYQTFGTKHDAKHP-PIEWVEGLAIIAAIVIVV 375
                      5556556665655555555555555555555445555555544.556643333333333333 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 3
  Cation_ATPase_C 158 sleewlialllalvv 172
                       ++++l ++++ + v
       KHJ31103.1 566 KGQQFLQIFIVTVTV 580
                      233333332222222 PP

  == domain 3  score: 133.8 bits;  conditional E-value: 2.1e-42
  Cation_ATPase_C    2 lplsaiqiLwinLvtDllpalaLaleppekdimkrpPrkkkepliskkmlrriliqgllqalvtllvffltlllf....gisekenklssny 89  
                       ++l+a+q+Lw+nL++D+++alaLa++pp ++i++r+  +k++plis+ m+++i++ +++q++vtl++ f +  +f    +        ++++
       KHJ31103.1 1053 SVLTAVQLLWVNLIMDTMAALALATDPPTESILDRKSDPKTAPLISITMWKMIIGESVFQLIVTLALNFGASHIFtyfkN------FGQVEQ 1138
                       79****************************************************************99988886633332......333567 PP

  Cation_ATPase_C   90 aqtmaFitlvlsqifnalnlrsrreslfkfsglfsnkllllaillslllqvlivyvpglnavfgtaplsleewlialllalvvllvdelvKl 181 
                         t++F+t+v++qifn +n r+++++++ f+g+ +n +++++ +++++ q++i++v  ++++f++ pl++ ew  +l+l++++++++ l++l
       KHJ31103.1 1139 IPTLVFNTFVWMQIFNQWNNRRLDNKFNIFEGVGRNFFFIGINIIMIAGQIMIIFV--GGKAFNVMPLNAFEWGCSLILGFLSIPLGALIRL 1228
                       ************************************9999999999**********..9*****************************9998 PP

  Cation_ATPase_C  182 l 182 
                       +
       KHJ31103.1 1229 I 1229
                       6 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.6   0.6   9.7e-39   2.5e-35       3     180 ..     397     606 ..     395     607 .. 0.90
   2 ?    0.3   1.5      0.17   4.3e+02     114     156 ..    1022    1062 ..    1011    1077 .. 0.83

  Alignments for each domain:
  == domain 1  score: 121.6 bits;  conditional E-value: 9.7e-39
                   S--EEEEE-TTS-EEEEGGG--TTSEEEEETT-B--SEEEEEEE-S.EEE-TTTS---S-EE-.................G-TTEE-TT-EEEE-EE CS
  E1-E2_ATPase   3 lpptakvirdgteeeidakelvpGDivllkagdrvpaDgrivegsa.evdesaLTGEslpvek.................ekgdmvfsGtvvvsgea 81 
                   +++ ++v r+g++ ei + ++ +GD++ l++gd +p+Dg+ + g++ ++des++TGEs  ++k                 +    + sG++v++g  
    KHJ31103.1 397 QDRDVNVTRSGKTSEISIYDVLVGDVLHLEPGDMIPVDGIFIGGHNlRCDESQITGESDIIRKhpadqvyaaisnhekleKLDPFILSGATVTEGVG 493
                   678899*********************************************************8888888888888877666667888888888*** PP

                   EEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-ST....TTSSTT...............HHHHHHHHHHHHHS CS
  E1-E2_ATPase  82 kavVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvfliall....lgksla...............eallralallvaai 159
                   ++ Vt tg ++ +gk   +++e  ++ tplq kl++l++++++++  ++ll+f ++++    +                    ++++ +++++v+a+
    KHJ31103.1 494 TFLVTSTGVNSSYGKTLMSLRED-PEITPLQSKLNNLAEYIAKLGGGAGLLLFTVLFIeflaR----LpnndatptvkgqqflQIFIVTVTVIVVAV 585
                   **********************9.*********************999999999998855440....34455667788888889************* PP

                   -TTHHHHHHHHHHHHHHHHHH CS
  E1-E2_ATPase 160 PcaLplavplalalgarrlak 180
                   P++Lplav+lala++++r+ k
    KHJ31103.1 586 PEGLPLAVTLALAFATTRMLK 606
                   ******************987 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.17
                    HHHHHHHHHHHHHHHHHHHHHHS-STTTSSTTHHHHHHHHHHH CS
  E1-E2_ATPase  114 kldklgkvlvpvvlliallvflialllgkslaeallralallv 156 
                     ++k+ ++ v+v +++++l+f++a+++ k+  e++l a++ll 
    KHJ31103.1 1022 AVKKFLQFQVTVNITAVVLTFITAITNSKE--ESVLTAVQLLW 1062
                    578999999999999999999999877776..88888888875 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.0   4.7e-26   1.2e-22       1      91 []     700     790 ..     700     790 .. 0.92
   2 ?   -3.0   0.0       3.2   8.1e+03      39      62 ..     838     861 ..     818     863 .. 0.83

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 4.7e-26
  Cation_ATPase   1 ilcNsaafsensekdevkllGnktEsALlvlaekl..gldteelreetkkvqeipFnssrKrmsvvlklepekkvrlyvKGApeiilkrCthv 91 
                    i++Ns+af   +  ++++++G+ktE+ALl +a++      ++  r++ k+vq +pF+s rK+m+v+++l +++k+rlyvKGApeii+++C+++
     KHJ31103.1 700 ITINSTAF-DGEVAGKKTFIGSKTEVALLTFARDYlgIGPVDLERSNAKIVQLYPFDSARKSMGVIIQL-EDGKFRLYVKGAPEIIFEKCSSI 790
                    689*****.99999********************99656667777788999******************.6*******************986 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.2
  Cation_ATPase  39 teelreetkkvqeipFnssrKrms 62 
                    ++ +r ++  ++e++++ + K m+
     KHJ31103.1 838 PKGARTNNGNINEVEYTEVFKKMT 861
                    567889999999999999999997 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   0.0   2.5e-23   6.4e-20       2     210 .]     624     980 ..     623     980 .. 0.80

  Alignments for each domain:
  == domain 1  score: 72.3 bits;  conditional E-value: 2.5e-23
                 SEEEEESBTTTBCHHHHHHHHHHHH...............CHHHHHHHHHH..............HHCHHHHHHHHHHHHH............HHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxx..............xxxxxxxxxxxxxxxx............xxxxxx RF
   Hydrolase   2 ktvvfDkdGTLttgepsvedvivsa...............alalaaaletg..............sehpigkalvaaakar............sgaltg 59 
                 ++++ Dk+GTLt+ +++ ++ + s                +         +              +++ +   l  + k++             g+++g
  KHJ31103.1 624 TAICSDKTGTLTQNNMQAVTGTLSTdlhfytsqllsinqeT---------SdsemnvntsiiktvAPQEFVSSLNLETKKMlsqsitinstafDGEVAG 713
                 5899****************999998888875555555551.........2434443334555555555555554444444544443333333666666 PP

                 HHHETTTE....................................................HHHHTHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHH... CS
                 xxxxxxxx....................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx... RF
   Hydrolase  60 fatfigrg....................................................ayaigkpewltaldippdlgaaigsaqsqgrtvall... 103
                   tfig                                                       y +g pe + +   ++ l++a+ s  s   t+      
  KHJ31103.1 714 KKTFIGSKtevalltfardylgigpvdlersnakivqlypfdsarksmgviiqledgkfrLYVKGAPEIIFEK-CSSILKDATLSPTSSELTEKTRqgv 811
                 66677777***********888888888888888888888888888888888888888888888888877777.6666666666666666666666888 PP

                 ...............................................TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT CS
                 ...............................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 104 ...............................................qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanql 155
                                                                +  +l+ f ++dp  +++++  av++ + ag+ v ++tgdn +ta+++a+++
  KHJ31103.1 812 ldkvnqyaskslrvialayrdldewppkgartnngnineveytevfkKMTLLGFFGLQDP--LREGVSLAVKKCQNAGVFVRMVTGDNMNTAKAIAREC 908
                 99999****************************************9999***********..************************************* PP

                 T.............GGGE.SEEEEHHCES...STTTSHHHHHHHHHHHTSTGGGEEEEESSHHHHHHHHHTT CS
                 x.............xxxx.xxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 156 G.............ddyf.daviasdiet...vakpspegkvaaireLqgkpeevamVGDgvnDaaalaaAg 210
                 G             ++ + +a+  ++i      a  sp++k+ ++++L+  +e va+ GDg nDa+al++A+
  KHJ31103.1 909 GiltagglvmegpeFRRMnKANMIKIIPQlqvLARSSPQDKRLLVKRLKDLGETVAVTGDGTNDAPALKMAD 980
                 *99999999998775555344444455448889999*************88999****************98 PP

>> Cation_ATPase_N  Cation transporter/ATPase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   2.4e-08   6.1e-05       9      69 .]     277     339 ..     269     339 .. 0.91

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 2.4e-08
  Cation_ATPase_N   9 vlekLetdlenGLtq.....aeaaerlkkyGpNelkekkkkslwvkllkqftnplvilLlvaalvs 69 
                      +++kL+    +GL++     +++ +r + y  N+l+ kk k+l+++ +  +++ ++ilL +aa vs
       KHJ31103.1 277 TYKKLD---NEGLSStptqkKAFYDRKRIYNDNRLPVKKGKNLLQLMWITYNDKVLILLSIAATVS 339
                      567776...799999899999999****************************************98 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.13   3.3e+02      23      54 ..     879     910 ..     871     931 .. 0.88
   2 !   20.2   0.3   1.6e-07   0.00041     195     255 .]     952    1013 ..     949    1013 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.13
                  HHHHHHHTTSEEEEE-SS-HHHHHHHHHHCCC CS
  Hydrolase_3  23 aikklkekgikvviATGRslravlpvleelgl 54 
                  a+kk++++g+ v   TG ++ +++ +++e g+
   KHJ31103.1 879 AVKKCQNAGVFVRMVTGDNMNTAKAIARECGI 910
                  89***********************9999885 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 1.6e-07
                   HHHHCT--GGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEE--GGG.THHHHHH CS
  Hydrolase_3  195 lakelnisleeviafGDgeNDieMLeaaglgvAmgnaseevkkaAdyvtksnne.dGVakal 255 
                   l+k+l+   e v++ GDg ND + L++a++g+ mg +  ev k A+ ++   ++ ++++ka+
   KHJ31103.1  952 LVKRLKDLGETVAVTGDGTNDAPALKMADVGFSMGISGTEVSKEASAIILMDDNfSSIVKAM 1013
                   556666677899999**********************************9999999999875 PP

>> RskA  Anti-sigma-K factor rskA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0045        11      42      89 ..     358     409 ..     273     429 .. 0.83
   2 ?    5.6   0.1    0.0067        17      31      70 ..    1332    1395 ..    1310    1402 .. 0.55

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0045
                 .......XXXXXXXXXXXXXX..........XXXXXXXXXXXXXXXXXXXXXXX CS
        RskA  42 r......laaaaAaalllvlgqlavasaaldplrqsaaqaeavvavlaapdaag 89 
                 +      la +aA ++++++g l   +++++ +   +  +++ v+v +++  + 
  KHJ31103.1 358 PiewvegLAIIAAIVIVVLVGSLNDWQKERQFVKLNRKKQDRDVNVTRSG--KT 409
                 13334447888888888999999999999999999999999999999888..33 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0067
                  ...................XXXXXXXXXXXXXX...........................XXXX CS
        RskA   31 ppaaapaararr.......laaaaAaalllvlg.................qlavasaaldplrq 70  
                  + ++++++r+r        +++a A+++++++g                 +  ++ a+l++ + 
  KHJ31103.1 1332 QNTPESRRRTRSnrsrsnsALGATAVMAGIIAGsvagwspidravkeegsPRYRSHAELETTDN 1395
                  2222222222223455667999999999999996666666666666655544555554444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       805  (0.0448993); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.89u 0.31s 00:00:01.20 Elapsed: 00:00:00.48
# Mc/sec: 8771.64
//
Query:       KHJ31104.1  [L=592]
Description: putative tubulin-specific chaperone e [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-19   68.3   0.1    7.4e-19   67.5   0.1    1.4  1  CAP_GLY        CAP-Gly domain
    2.2e-10   40.6  15.8    0.00032   21.0   0.2    5.0  5  LRR_4          Leucine Rich repeats (2 copies)
    8.5e-10   38.4   4.9      2e-05   24.1   0.6    3.3  3  LRR_9          Leucine-rich repeat
    1.1e-05   25.0  13.8      0.025   14.3   0.8    4.7  4  LRR_8          Leucine rich repeat
    0.00041   20.2   3.7        4.6    7.6   0.1    5.1  5  LRR_6          Leucine Rich repeat
  ------ inclusion threshold ------
      0.078   13.6   8.5        6.7    7.7   0.2    5.8  6  LRR_1          Leucine Rich Repeat
      0.096   12.5   0.3         11    5.9   0.1    3.1  3  Synaptobrevin  Synaptobrevin


Domain annotation for each model (and alignments):
>> CAP_GLY  CAP-Gly domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.5   0.1   2.9e-22   7.4e-19       1      64 [.       6      77 ..       6      78 .. 0.85

  Alignments for each domain:
  == domain 1  score: 67.5 bits;  conditional E-value: 2.9e-22
     CAP_GLY  1 vgdrv....klkegrrGvvryvGpvpfakgewvGveldep.nGkndGsvkgkrYFeck...pnrGvFvrpek 64
                +gdrv    k  + + +++ry+G++ + +g w+Gve+d+  +Gk+dGs +gkrYF+ck      G+Fvrp++
  KHJ31104.1  6 IGDRVsyttKFGTSEICTIRYIGEILGYQGSWLGVEWDDGsRGKHDGSLDGKRYFSCKslsSTAGSFVRPSR 77
                6899854433557788*********************99769***************9555579******86 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.2   1.3e-07   0.00032       2      40 ..     161     202 ..     160     210 .. 0.82
   2 ?    3.1   0.3     0.055   1.4e+02       2      39 ..     219     258 ..     218     264 .. 0.77
   3 !    6.0   3.2    0.0068        17       2      41 ..     266     308 ..     265     311 .. 0.75
   4 !   16.3   0.0   3.7e-06    0.0096       2      36 ..     320     357 ..     319     364 .. 0.83
   5 ?   -3.1   0.0       4.9   1.3e+04       3      13 ..     384     392 ..     383     395 .. 0.65

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 1.3e-07
                 S--EEE--SS---E-S-....HHH-TT--EEE-.-S-----GG CS
       LRR_4   2 nLevLdLsnNqltdipl....leklpnLkeLdLsgNnlitdld 40 
                 +  +LdLs N  +++      ++klpnLk+L+L gN +++d++
  KHJ31104.1 161 KIVELDLSRNLFKSFAEicliCSKLPNLKKLSLRGN-RLSDIE 202
                 6679*********98887754448*********777.999985 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.055
                 S--EEE--SS---E-S-...HHH.-TT--EEE-.-S-----G CS
       LRR_4   2 nLevLdLsnNqltdipl...lek.lpnLkeLdLsgNnlitdl 39 
                 n ++L L + +l ++++   l++ +  L +L+ s+N ++++l
  KHJ31104.1 219 NITKLELDD-MLISWESivsLRNyFSELVTLTASSN-YLKSL 258
                 678888888.77778886666677999999999888.98887 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0068
                 S--EEE--SS-...--E-S-HHH-TT--EEE-.-S-----G.GG CS
       LRR_4   2 nLevLdLsnNq...ltdiplleklpnLkeLdLsgNnlitdl.de 41 
                 nL +L L nN    l+d+ +l k ++L++L L   n+i+++ ++
  KHJ31104.1 266 NLVSLALENNEfetLRDLYPLTKSKSLRTL-LLKANKISKIaSN 308
                 88899999999555555555779*******.8677799999444 PP

  == domain 4  score: 16.3 bits;  conditional E-value: 3.7e-06
                 S--EEE--SS---E-S-....HHH-TT--EEE-.-S--- CS
       LRR_4   2 nLevLdLsnNqltdipl....leklpnLkeLdLsgNnli 36 
                 +Le++dLs N + ++++    +  +p L+ L +s+N ++
  KHJ31104.1 320 KLEYVDLSYNAIDSWSFvdelPIVFPGLTGLRISNN-PL 357
                 8****************9876336*********666.65 PP

  == domain 5  score: -3.1 bits;  conditional E-value: 4.9
                 --EEE--SS-- CS
       LRR_4   3 LevLdLsnNql 13 
                 L++L++s   +
  KHJ31104.1 384 LKTLNFSK--I 392
                 67777775..4 PP

>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.2   2.4e-05     0.061      63     127 ..     132     200 ..     121     205 .. 0.85
   2 !   14.1   0.7   9.5e-06     0.024      62     127 ..     241     304 ..     224     308 .. 0.82
   3 !   24.1   0.6     8e-09     2e-05      45     171 ..     268     413 ..     262     416 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.4e-05
       LRR_9  63 lkrlktlllnnnriv...riaegleevlPnleelvltnnelqeladldPla.slkklellsllknpvtn 127
                 l+ +k+++l+  ri+   r  e+++e+ P++ el l+ n ++++a++  +  +l++l+ lsl  n +++
  KHJ31104.1 132 LHEMKIVILDGMRICiaeREHENIDEICPKIVELDLSRNLFKSFAEICLICsKLPNLKKLSLRGNRLSD 200
                 77899999*****985556789************************9876427*********9998765 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 9.5e-06
       LRR_9  62 llkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklellsllknpvtn 127
                 ++  l tl  ++n +  +  +l++   nl +l l nne++ l dl Pl++ k+l++l l  n +++
  KHJ31104.1 241 YFSELVTLTASSNYLKSLPCQLKD--DNLVSLALENNEFETLRDLYPLTKSKSLRTLLLKANKISK 304
                 566777777777777777777776..599*****************************99999887 PP

  == domain 3  score: 24.1 bits;  conditional E-value: 8e-09
       LRR_9  45 dtidlsdndirkl.dgfPll..krlktlllnnnrivriaegleevlP.....nleelvltnnelqeladldPl.aslkklellsllknpv........t 126
                  ++ l +n+   l d +Pl   k l+tlll+ n+i +ia +l++++      +le + l+ n +++ + +d l + ++ l+ l + +np+        +
  KHJ31104.1 268 VSLALENNEFETLrDLYPLTksKSLRTLLLKANKISKIASNLNDAIGikfseKLEYVDLSYNAIDSWSFVDELpIVFPGLTGLRISNNPLyptpvqspS 366
                 56678889988883445765225799*****************998533333899999*******9999988856799******999987222222221 PP

       LRR_9 127 nkkeyrlyviy..klkqlrlldfrkvklkereeaeklfkskkgkela 171
                  ++   +++i   ++ +l+ l+f k+ + er++ae ++ sk ++el+
  KHJ31104.1 367 IQDTEENFMITvgRIGTLKTLNFSKITTTERNNAEIYYLSKIAQELT 413
                 222334455433399*************************9999875 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.8   9.8e-06     0.025      25      61 .]     160     198 ..     158     198 .. 0.88
   2 ?   -2.5   0.0       1.8   4.7e+03       3      16 ..     245     258 ..     240     264 .. 0.57
   3 !   10.2   2.7   0.00019      0.48       2      43 ..     266     308 ..     265     331 .. 0.76
   4 !    5.1   0.0    0.0076        19      25      40 ..     319     334 ..     308     357 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 9.8e-06
                 TT--EEE--SS---GGGGGGG..TT--S-.EEE--SS-- CS
       LRR_8  25 snLkvLdLsnNllttlspgaf..sgLpsLrsLdLsgNrL 61 
                 ++  +LdLs+Nl +++ + ++  s Lp+L++L L+gNrL
  KHJ31104.1 160 PKIVELDLSRNLFKSFAEICLicSKLPNLKKLSLRGNRL 198
                 56678**************974467************98 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.8
                 -SEEE-TTS--SEE CS
       LRR_8   3 LtsLdLsnNrltsl 16 
                 L +L  s+N+l+sl
  KHJ31104.1 245 LVTLTASSNYLKSL 258
                 34444444444444 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.00019
                 T-SEEE-TTS--SEE-TTSSTT.-TT--EEE--SS---GGGGG CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkg.lsnLkvLdLsnNllttlspg 43 
                 nL sL L nN ++ l+d    +  ++L++L L+ N+++ +  +
  KHJ31104.1 266 NLVSLALENNEFETLRDLYPLTkSKSLRTLLLKANKISKIASN 308
                 899**************998888***************99654 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.0076
                 TT--EEE--SS---GG CS
       LRR_8  25 snLkvLdLsnNllttl 40 
                 ++L++ dLs+N +++ 
  KHJ31104.1 319 EKLEYVDLSYNAIDSW 334
                 7899*******99875 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.05   1.3e+02       2      14 ..     159     171 ..     159     174 .. 0.85
   2 !    7.6   0.1    0.0018       4.6       3      17 ..     186     200 ..     184     201 .. 0.91
   3 ?   -1.9   0.1         2   5.1e+03       2      16 ..     289     303 ..     288     304 .. 0.83
   4 !    6.3   0.0    0.0046        12       4      16 ..     320     332 ..     317     333 .. 0.88
   5 ?   -1.6   0.1       1.6   4.1e+03       4      11 ..     383     390 ..     383     391 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.05
       LRR_6   2 nthLteLdLsgNd 14 
                 ++++ eLdLs N 
  KHJ31104.1 159 CPKIVELDLSRNL 171
                 67899******96 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0018
       LRR_6   3 thLteLdLsgNdIgD 17 
                 ++L++L+L+gN ++D
  KHJ31104.1 186 PNLKKLSLRGNRLSD 200
                 89***********98 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 2
       LRR_6   2 nthLteLdLsgNdIg 16 
                 + +L++L L+ N+I+
  KHJ31104.1 289 SKSLRTLLLKANKIS 303
                 6799***99999986 PP

  == domain 4  score: 6.3 bits;  conditional E-value: 0.0046
       LRR_6   4 hLteLdLsgNdIg 16 
                 +L+++dLs+N I+
  KHJ31104.1 320 KLEYVDLSYNAID 332
                 89********997 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 1.6
       LRR_6   4 hLteLdLs 11 
                 +L++L+ s
  KHJ31104.1 383 TLKTLNFS 390
                 8*****98 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.47   1.2e+03       4      12 ..     164     172 ..     161     183 .. 0.74
   2 ?    7.7   0.2    0.0026       6.7       1      19 [.     187     205 ..     187     207 .. 0.90
   3 ?   -1.3   0.1       2.3   5.8e+03       1      13 [.     266     278 ..     266     286 .. 0.78
   4 ?    2.4   0.0      0.14   3.7e+02       1      12 [.     320     331 ..     320     341 .. 0.82
   5 ?    1.6   0.0      0.27   6.8e+02       3      20 ..     348     367 ..     346     374 .. 0.73
   6 ?   -3.1   0.0         7   1.8e+04       2       8 ..     384     390 ..     383     392 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.47
       LRR_1   4 hLdLsnnpl 12 
                 +LdLs+n +
  KHJ31104.1 164 ELDLSRNLF 172
                 8******87 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0026
       LRR_1   1 nLrhLdLsnnpllglppns 19 
                 nL++L L++n+l++++  +
  KHJ31104.1 187 NLKKLSLRGNRLSDIEVKC 205
                 8***********9998877 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 2.3
       LRR_1   1 nLrhLdLsnnpll 13 
                 nL +L L+nn ++
  KHJ31104.1 266 NLVSLALENNEFE 278
                 7888999999875 PP

  == domain 4  score: 2.4 bits;  conditional E-value: 0.14
       LRR_1   1 nLrhLdLsnnpl 12 
                 +L++ dLs+n +
  KHJ31104.1 320 KLEYVDLSYNAI 331
                 7********976 PP

  == domain 5  score: 1.6 bits;  conditional E-value: 0.27
       LRR_1   3 rhLdLsnnpl..lglppnsf 20 
                 + L +snnpl  +  +++s+
  KHJ31104.1 348 TGLRISNNPLypTPVQSPSI 367
                 5589*****97755555555 PP

  == domain 6  score: -3.1 bits;  conditional E-value: 7
       LRR_1   2 LrhLdLs 8  
                 L++L+ s
  KHJ31104.1 384 LKTLNFS 390
                 99**986 PP

>> Synaptobrevin  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.063   1.6e+02       3      51 ..     123     173 ..     121     177 .. 0.76
   2 ?   -0.0   0.0       0.3   7.8e+02      22      40 ..     187     205 ..     185     219 .. 0.86
   3 ?    5.9   0.1    0.0043        11      12      38 ..     409     435 ..     398     436 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.063
                    XHHHHHHHHHHCCCCHHCCHHHHCH.CC.CCCHHHHCCCCHHHHHHHHHHH CS
  Synaptobrevin   3 dklakikaevdevkdimkeNidkvl.er.gekldeLvdktenLqssaqqFk 51 
                    dk+++i++ + e k ++ + ++  + er +e++de++ k  +L  s + Fk
     KHJ31104.1 123 DKIRQIQSRLHEMKIVILDGMRICIaEReHENIDEICPKIVELDLSRNLFK 173
                    89****************999965514425789998888777776666666 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.3
                    HHHHCHCCCCCHHHHCCCC CS
  Synaptobrevin  22 NidkvlergekldeLvdkt 40 
                    N++k+  rg++l++++ k 
     KHJ31104.1 187 NLKKLSLRGNRLSDIEVKC 205
                    999***********99875 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0043
                    HHCCCCHHCCHHHHCHCCCCCHHHHCC CS
  Synaptobrevin  12 vdevkdimkeNidkvlergekldeLvd 38 
                     +e +++ ++N+d vl+r+++  eL++
     KHJ31104.1 409 AQELTEVSEDNVDIVLSRHKRFKELCN 435
                    567788889**************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (592 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       552  (0.0307881); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 4076.01
//
Query:       KHJ31105.1  [L=309]
Description: putative rna methylase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.1e-09   36.4   0.0    1.1e-07   31.8   0.0    2.1  1  UPF0020          Putative RNA methylase family UPF0020
     0.0037   16.6   0.0     0.0059   15.9   0.0    1.2  1  N6_Mtase         N-6 DNA Methylase
  ------ inclusion threshold ------
      0.011   15.4   0.9       0.02   14.6   0.1    1.7  2  MethyltransfD12  D12 class N6 adenine-specific DNA methyltran
      0.026   14.2   0.0       0.15   11.7   0.0    2.0  2  N6_N4_Mtase      DNA methylase
      0.034   14.3   0.0      0.086   13.0   0.0    1.6  1  DNA_ligase_IV    DNA ligase IV
      0.047   13.3   0.0       0.89    9.1   0.0    2.1  2  Methyltransf_15  RNA cap guanine-N2 methyltransferase


Domain annotation for each model (and alignments):
>> UPF0020  Putative RNA methylase family UPF0020
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.0   3.6e-11   1.1e-07       3     136 ..      51     165 ..      50     169 .. 0.81

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 3.6e-11
                 SS-SS---SS-HHHHHHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHH.HHHHHHHTT CS
     UPF0020   3 yRefngpapLketLAaalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqg.areNaekag 100
                 +R++   +++ ++LA +  +++ +  g+ ++DP+ GsG++l+  a  ga++                           gsD+d r ++g +++N+ +  
  KHJ31105.1  51 KRNYICTTSMDAELALVTANISLAASGKLFYDPFVGSGSFLVACAHFGATVF--------------------------GSDIDGRSIRGkGERNLYSNF 123
                 578888999***************************************9999..........................*********963677876654 PP

                 -G..GGEEEEE--GGG--....STTS---EEEE--------- CS
     UPF0020 101 vg..dliefsqadaakLr....lkegevdvivtnpPYGerlg 136
                 ++   +  f +  +a+L+    ++   +d+i+++pPYG r g
  KHJ31105.1 124 IQykLTDFFGDSFVADLTnnplRQIRVFDSIICDPPYGVREG 165
                 4400334566666777776654355589**********9965 PP

>> N6_Mtase  N-6 DNA Methylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0     2e-06    0.0059      38     138 ..      68     163 ..      62     190 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 2e-06
    N6_Mtase  38 ivellepksgesvyDpacGsggllvqaekvlkeedgktkelsiyGqeknettyr.LakmNlllhgieykkvkirlgdtlekpkfe....kdkkfdvvva 131
                  +++    sg+  yDp +Gsg++lv  +++           +++G +++  ++r  ++ Nl+   i+yk +    gd++  + ++    + + fd ++ 
  KHJ31105.1  68 TANISLAASGKLFYDPFVGSGSFLVACAHF---------GATVFGSDIDGRSIRgKGERNLYSNFIQYK-LTDFFGDSFVADLTNnplrQIRVFDSIIC 156
                 5566666788899************99997.........578999999987766368999999999999.89999999999999988888999****** PP

    N6_Mtase 132 Nppfnqk 138
                  pp++ +
  KHJ31105.1 157 DPPYGVR 163
                 ****987 PP

>> MethyltransfD12  D12 class N6 adenine-specific DNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.1   6.6e-06      0.02      20      55 ..      76     111 ..      66     143 .. 0.89
   2 ?   -1.6   0.1      0.59   1.8e+03     183     188 ..     156     161 ..     134     166 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 6.6e-06
                      --SEEEETT-TTSCCHHCS...SSCEEEEES-HHHH CS
  MethyltransfD12  20 kgktfvepFaGggaVffeakkqgkkvlinDinedli 55 
                      +gk f++pF+G+g++ +++ + g +v  +Di   +i
       KHJ31105.1  76 SGKLFYDPFVGSGSFLVACAHFGATVFGSDIDGRSI 111
                      6788**************************988776 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.59
                      E--S-T CS
  MethyltransfD12 183 lDPPYn 188
                      +DPPY 
       KHJ31105.1 156 CDPPYG 161
                      9****6 PP

>> N6_N4_Mtase  DNA methylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   5.1e-05      0.15     191     222 ..      76     107 ..      12     112 .. 0.79
   2 ?    0.5   0.0      0.14   4.2e+02       2      14 ..     152     164 ..     151     268 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5.1e-05
                  TT-EEEETT-TTTHHHHHHHHTT-EEEEEESS CS
  N6_N4_Mtase 191 kgdivlDpFaGSGtTavaakelgrkfiGieie 222
                   g++  DpF GSG+ +va++  g    G +i+
   KHJ31105.1  76 SGKLFYDPFVGSGSFLVACAHFGATVFGSDID 107
                  489999*****************999999886 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.14
                  EEEEE--SSSSSC CS
  N6_N4_Mtase   2 dlivtdpPYntgk 14 
                  d i+ dpPY++ +
   KHJ31105.1 152 DSIICDPPYGVRE 164
                  5699999999875 PP

>> DNA_ligase_IV  DNA ligase IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   2.9e-05     0.086      10      28 ..     130     148 ..     129     154 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.9e-05
  DNA_ligase_IV  10 DeYGDSYtvDtdeeqLKev 28 
                    D +GDS+ +D +++ L+++
     KHJ31105.1 130 DFFGDSFVADLTNNPLRQI 148
                    78***************64 PP

>> Methyltransf_15  RNA cap guanine-N2 methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.049   1.5e+02      69     116 ..      23      70 ..       7      74 .. 0.71
   2 ?    9.1   0.0    0.0003      0.89       4      82 ..      80     161 ..      77     166 .. 0.74

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.049
  Methyltransf_15  69 ki.kvdlvflSpPwGGpsYkkqekfdlkkklkplkleqllkeslklskn 116
                         k d+v+l    GG +    +k+dl kk + ++ + +  e   ++ n
       KHJ31105.1  23 DHrKPDMVYLGRYLGGSDRDIVQKLDL-KKRNYICTTSMDAELALVTAN 70 
                      22379**********************.666666666665555555555 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0003
  Methyltransf_15   4 ilDlfsGaGGnviqfalvfekviaieinleklacaqhNaevYgvsdkitlvlgdvfe......llaklkleki.kvdlvflSpPwG 82 
                        D+f G+G   ++ a+ + +v++++i+ + +       ++Y  s+ i+++l d+f       l  +  l++i  +d +++ pP G
       KHJ31105.1  80 FYDPFVGSGSFLVACAHFGATVFGSDIDGRSIRGK-GERNLY--SNFIQYKLTDFFGdsfvadL-TNNPLRQIrVFDSIICDPPYG 161
                      569*************************9999854.344567..77777777777765644542.333334444699999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 2074.07
//
Query:       KHJ31106.1  [L=244]
Description: putative splicing factor 3a subunit 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-36  122.9   0.1    7.6e-36  122.4   0.1    1.3  1  SF3A2     Pre-mRNA-splicing factor SF3a complex subunit 2 (Pr
    1.1e-05   25.7   0.5    2.1e-05   24.7   0.5    1.5  1  zf-met    Zinc-finger of C2H2 type
  ------ inclusion threshold ------
      0.063   12.8   1.5       0.11   12.0   1.5    1.5  1  PRP4      pre-mRNA processing factor 4 (PRP4) like


Domain annotation for each model (and alignments):
>> SF3A2  Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.4   0.1   1.3e-39   7.6e-36       1      96 []     121     216 ..     121     216 .. 0.99

  Alignments for each domain:
  == domain 1  score: 122.4 bits;  conditional E-value: 1.3e-39
       SF3A2   1 igrPgykvtkvrdpeteqvgllvevkypeikeevkPlhrimsaleqkleekpdkkvqyLliaaePYetiafkipskeidksedklwtfwdkdkkey 96 
                 igrPgyk+tk+rdp t+q+gl+++++ypei+++v+P +r+msa+eqk++++pdk++qy+l+aaePYe ++fk++++eid+++d+++t wd+d ke+
  KHJ31106.1 121 IGRPGYKITKTRDPVTRQQGLVFQLQYPEISQDVTPKVRFMSAFEQKIDDPPDKNFQYMLVAAEPYEICGFKLQAREIDRTNDRYYTWWDPDLKEF 216
                 8********************************************************************************************998 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.5   3.5e-09   2.1e-05       1      25 []      54      78 ..      54      78 .. 0.98

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 3.5e-09
      zf-met  1 fyCelCnvtfnsesqlksHlqGKkH 25
                f+C lC +++++ +++ +H qG+kH
  KHJ31106.1 54 FECRLCLTVHQNDGSYLAHTQGRKH 78
                89*********************** PP

>> PRP4  pre-mRNA processing factor 4 (PRP4) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.5   1.9e-05      0.11      18      29 .]      22      33 ..      22      33 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.9e-05
        PRP4 18 thadRreRLrkL 29
                t+adRreRLrkL
  KHJ31106.1 22 TNADRRERLRKL 33
                79*********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1876.53
//
Query:       KHJ31107.1  [L=489]
Description: putative nad-dependent histone deacetylase sir2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      4e-57  193.0   0.0      1e-56  191.6   0.0    1.7  1  SIR2          Sir2 family
    1.2e-06   28.4   0.1    2.9e-06   27.1   0.1    1.6  2  DUF592        Protein of unknown function (DUF592)
    0.00033   20.4   0.1       0.69    9.6   0.0    2.3  2  TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain


Domain annotation for each model (and alignments):
>> SIR2  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.6   0.0   1.7e-60     1e-56       1     177 []     181     410 ..     181     410 .. 0.97

  Alignments for each domain:
  == domain 1  score: 191.6 bits;  conditional E-value: 1.7e-60
                 -GGGGGGGT---SSS.TTSHHHHSCHHHHSSHHHHHHHHHHHHH..HHHHHHHHHHCCTSS--HHHHHHHHHHHTTCEEEEEES-SSSHHHHTT-S..S CS
        SIR2   1 GAGiStesGipdfRs.keGlyaklakeelaspealfskkllvee..vfyniarellaeeaepnaaHkalkklekkgkllrliTQNiDgLekkaGsk..k 94 
                 GAGiSt++GipdfRs + Gly+kl++ +l++p+++f++++++e+  +fy+ia ++l+e++ ++++H+++  l++kgkll+++ QNiD++e  aG+   k
  KHJ31107.1 181 GAGISTSLGIPDFRSkDIGLYSKLEHLGLNDPQEVFDINIFKEDpsIFYSIAGDILPETNRFTPTHAFIYLLQQKGKLLTNYSQNIDNIETVAGILpeK 279
                 9**************888*****************************************************************************888* PP

                 EEETTEEEEEEEETTTSBEEECCGGHCHHHCCTT.B-TTTCC..............................................BEEEEE--CTS CS
        SIR2  95 vvelHGslakakcvkcekkldkeelqeeieaekvpecekcgk..............................................llkpdvvfFGe 147
                 ++++HGs+a+a+cv+c++++ +++++++i+a ++p ce+c++                                              ++kpd++fFGe
  KHJ31107.1 280 LIQCHGSFATASCVDCKYQVPGDTIFDDIRAGRIPLCENCTQnirtislpkimkrkrprnsqekrrktnncrtndtssdedneipkagVMKPDITFFGE 378
                 *************************************************************************************************** PP

                 B-SHHHHHHHH..HHHH-SEEEEES--STSTT CS
        SIR2 148 alpdklkklie..kveeadlllviGtSlkVap 177
                 alpd+++  ++  + + +dl++viGtSlkVap
  KHJ31107.1 379 ALPDRFSARLTnhDRHLVDLVIVIGTSLKVAP 410
                 ***88876655478889*************98 PP

>> DUF592  Protein of unknown function (DUF592)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       1.7     1e+04      30      50 ..      87     107 ..      85     109 .. 0.81
   2 !   27.1   0.1   4.8e-10   2.9e-06     116     153 .]     143     180 ..     139     180 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 1.7
      DUF592  30 edslnarlfLKkyglkkFldk 50 
                 ed +  r  L++ g +kF+++
  KHJ31107.1  87 EDAVAFRRTLRQIGPAKFYET 107
                 566777888999999999986 PP

  == domain 2  score: 27.1 bits;  conditional E-value: 4.8e-10
      DUF592 116 LqkainkvlstrlrlsnfstidhfvdklkkakkilVlt 153
                 L  ai++ ls r++l++++tid++v+ l+k+k i+Vlt
  KHJ31107.1 143 LSLAISRELSKRIKLQQYNTIDDVVALLQKSKNIVVLT 180
                 6779*********************************9 PP

>> TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0   0.00024       1.5       1      25 [.     163     187 ..     163     194 .. 0.90
   2 !    9.6   0.0   0.00012      0.69      77     137 .]     395     452 ..     370     452 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00024
                   HHHHHHHHHH-SSEEEEE-CHHCHT CS
  TPP_enzyme_M   1 iekaaellkaakrpvilvGggvars 25 
                   i+++++ll+++k++v+l G g+++s
    KHJ31107.1 163 IDDVVALLQKSKNIVVLTGAGISTS 187
                   789******************9976 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00012
                   H-SEEEEES-SSSTCCCTTTTTTTTTT-EEEEEESSCCCCTTCC--SEEEECTHHHHHHHH CS
  TPP_enzyme_M  77 eaDlvlalGarfddirttgsepefapeakiihididpaeigknyqvdlaivgdvketleaL 137
                     Dlv+++G+ ++   + ++  ++ p  +i +i i+++ +++++  d+ ++gd++ ++ +L
    KHJ31107.1 395 LVDLVIVIGTSLKVAPV-SEVVPYLPA-QIPQIFISRTPVSHVN-FDVDLLGDCDIVVAEL 452
                   57**********88444.444466665.799**********987.9********9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       689  (0.0384294); expected 358.6 (0.02)
Passed bias filter:                      571  (0.0318478); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.39
# Mc/sec: 3714.25
//
Query:       KHJ31108.1  [L=218]
Description: putative ankyrin repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-12   47.1   0.0    1.2e-08   35.0   0.0    2.3  2  Ank_5     Ankyrin repeats (many copies)
    4.1e-09   36.9   0.1    1.5e-08   35.1   0.1    1.9  2  Ank_2     Ankyrin repeats (3 copies)
    1.1e-08   35.4   0.2    1.2e-06   28.9   0.2    2.6  3  Ank_4     Ankyrin repeats (many copies)
    2.8e-05   24.3   0.1       0.36   11.4   0.0    2.7  2  Ank       Ankyrin repeat
     0.0004   20.6   0.2     0.0047   17.3   0.0    2.6  2  Ank_3     Ankyrin repeat


Domain annotation for each model (and alignments):
>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.0   3.4e-12   1.2e-08      11      56 .]      30      76 ..      21      76 .. 0.93
   2 !    9.7   0.0    0.0003       1.1      30      54 ..      80     105 ..      79     106 .. 0.94

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 3.4e-12
       Ank_5 11 rldgggntpLhvAakygaadvvrlLl.argadlnltdsrGltaldlA 56
                 +d+ g++ Lh Aa+y++ +++r L+ +++++ +l+d +G+tal +A
  KHJ31108.1 30 SQDEQGYSLLHAAASYNHVELLRSLVqEFHVHVDLRDIDGETALYVA 76
                6899****************************************998 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0003
       Ank_5  30 dvvrlLl.argadlnltdsrGltald 54 
                 d++rlL+ + +ad +++ s+G+tal+
  KHJ31108.1  80 DCARLLVeELNADMTIRSSEGKTALQ 105
                 89999*******************97 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   0.1   4.3e-12   1.5e-08      23      82 ..      29      96 ..       7      97 .. 0.74
   2 ?    4.7   0.0     0.012        45      12      35 ..      81     109 ..      80     127 .. 0.51

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 4.3e-12
       Ank_2 23 n.k..ngktaLhyAakngnleivklLleh.......adndgrtpLhyAarsghleivklLlek.gadinlk 82
                + +  +g + Lh+Aa+++++e+++ L+++        d dg+t+L++A   +  ++++lL+e  +ad++++
  KHJ31108.1 29 SsQdeQGYSLLHAAASYNHVELLRSLVQEfhvhvdlRDIDGETALYVAE--TI-DCARLLVEElNADMTIR 96
                232469*********************9445776655599********4..55.*******6669999986 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.012
       Ank_2  12 lvklLl..egadpn..k.ngktaLhyAak 35 
                 + +lL+   +ad+   + +gktaL+  ++
  KHJ31108.1  81 CARLLVeeLNADMTirSsEGKTALQKITE 109
                 34444422223332331455555555554 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.1    0.0013       4.6       5      44 ..       6      44 ..       3      46 .. 0.82
   2 !   28.9   0.2   3.4e-10   1.2e-06       2      54 ..      36      85 ..      35      86 .. 0.88
   3 !    5.5   0.0    0.0075        27      14      40 ..      79     105 ..      76     106 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0013
       Ank_4  5 LhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAak 44
                L+ +a++ + +l++ L e+      q +++G ++lh Aa+
  KHJ31108.1  6 LFLLAADDPSRLLQVLRESPSLASSQ-DEQGYSLLHAAAS 44
                78889999999999999875555677.***********96 PP

  == domain 2  score: 28.9 bits;  conditional E-value: 3.4e-10
       Ank_4  2 ltaLhyaaisgrlelvrlLl.ekgadinaqdnrsGetalhiAakrgnveilklL 54
                +++Lh+aa+++++el+r+L+ e+ + ++ + +++Getal+ A   + +++++lL
  KHJ31108.1 36 YSLLHAAASYNHVELLRSLVqEFHVHVDLR-DIDGETALYVA---ETIDCARLL 85
                689*****************6679******.*********99...777777766 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.0075
       Ank_4  14 lelvrlLlek.gadinaqdnrsGetalh 40 
                 ++++rlL+e  +ad   + +++G tal+
  KHJ31108.1  79 IDCARLLVEElNADMTIR-SSEGKTALQ 105
                 689*****6559**9999.999****97 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0    0.0001      0.36       2      23 ..      35      56 ..      34      67 .. 0.76
   2 !   10.4   0.0    0.0002      0.73       1      29 [.      68      95 ..      68      98 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0001
                SBBHHHHHHHHTTHHHHHHHHT CS
         Ank  2 GnTPLHlAatngkkriiklLLh 23
                G++ LH Aa++++++ ++ L++
  KHJ31108.1 35 GYSLLHAAASYNHVELLRSLVQ 56
                9***********9999988883 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.0002
                TSBBHHHHHHHHTTHHHHHHHH.T.TTSTTC CS
         Ank  1 dGnTPLHlAatngkkriiklLL.h.GAnlna 29
                dG T+L +A t++   +++lL+    A+ ++
  KHJ31108.1 68 DGETALYVAETID---CARLLVeElNADMTI 95
                8*******88***...*****9534677666 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   1.3e-06    0.0047       2      30 ..      35      63 ..      34      65 .. 0.89
   2 ?   -0.1   0.0       0.6   2.2e+03       1       9 [.      68      76 ..      68      92 .. 0.63

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.3e-06
       Ank_3  2 GetpLhlAarsgnleivkfLlenkgadvn 30
                G+++Lh Aa+++++e+++ L++++++ v+
  KHJ31108.1 35 GYSLLHAAASYNHVELLRSLVQEFHVHVD 63
                99********************7777665 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.6
       Ank_3  1 nGetpLhlA 9 
                +Get+L++A
  KHJ31108.1 68 DGETALYVA 76
                588888754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       519  (0.0289475); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1620.42
//
Query:       KHJ31109.1  [L=1407]
Description: putative autophagy-related protein 11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.1e-43  146.0   0.0    6.1e-43  146.0   0.0    4.2  4  ATG11           Autophagy-related protein 11
    0.00035   21.1  13.8    0.00035   21.1  13.8    5.2  5  Fez1            Fez1
  ------ inclusion threshold ------
      0.034   14.5   0.9       0.92    9.9   0.0    3.4  3  DinI            DinI-like family


Domain annotation for each model (and alignments):
>> ATG11  Autophagy-related protein 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.26   1.5e+03       6      24 ..     287     305 ..     284     323 .. 0.80
   2 ?   -3.2   2.1       1.4   8.1e+03       2      40 ..     665     703 ..     664     723 .. 0.71
   3 ?   -0.6   0.5      0.22   1.3e+03       3      40 ..     917     953 ..     915     960 .. 0.70
   4 !  146.0   0.0     1e-46   6.1e-43       2     128 ..    1097    1246 ..    1096    1247 .. 0.98

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.26
       ATG11   6 krfkdveelakkltkenks 24 
                 + +k++eelakk+t + ++
  KHJ31109.1 287 QLLKEIEELAKKITSDCEN 305
                 67899********998754 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.4
       ATG11   2 ssvikrfkdveelakkltkenkskkekleklqseskeki 40 
                 +++i+r+   e+l  ++ + n++k+++l++l+ +++e i
  KHJ31109.1 665 KEIIERKLTEEKLKTEIDEVNSTKRDLLKNLEAQQREFI 703
                 567777777777777777777777777777777666665 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.22
       ATG11   3 svikrfkdveelakkltkenkskkekleklqseskeki 40 
                 ++i+   d+e+l kkl+ e+ +++++++ +q  + ++i
  KHJ31109.1 917 KIIDYEIDLESLKKKLSDEE-NRSSSMKDSQFTQASRI 953
                 677777899*******9988.45555555555555665 PP

  == domain 4  score: 146.0 bits;  conditional E-value: 1e-46
       ATG11    2 ssvikrfkdveelakkltkenkskkekleklqseskekitlknfkvgDLalflptrreeqdlstqpwaafnagaphYfLkeeselalksrewlvGri 98  
                  +++ kr+kd+e +akk++++++s++ek++++q+e++ ki++knfk+gDLalflptr    +++t +waafn+gaphYfLke++ ++l+sr+wl++ri
  KHJ31109.1 1097 ETISKRIKDLEYTAKKYSRDARSYREKFQSAQKEAQGKIAFKNFKEGDLALFLPTR----NQATGAWAAFNIGAPHYFLKEQDFHKLRSRDWLLARI 1189
                  6799****************************************************....5689********************************* PP

       ATG11   99 vkieekvvde...........................kdeNpfklskglkwylvkaa 128 
                   kie++vvd                            +d+Npf+ls+gl+wyl++aa
  KHJ31109.1 1190 HKIEDRVVDLskslsgphihisqqrscteasydgdpyEDDNPFDLSDGLRWYLIDAA 1246
                  *******************************************************97 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.6      0.65   3.9e+03      59      79 ..     242     267 ..     211     396 .. 0.55
   2 ?  -10.8  20.9         3   1.8e+04     114     174 ..     620     718 ..     457     806 .. 0.61
   3 !   21.1  13.8   5.8e-08   0.00035      11     143 ..     840     973 ..     829    1017 .. 0.77
   4 ?   -3.9   0.1       2.6   1.6e+04      73      95 ..    1108    1130 ..    1092    1140 .. 0.45
   5 ?   -1.7   1.9      0.57   3.4e+03      73     145 ..    1290    1351 ..    1266    1378 .. 0.37

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.65
        Fez1  59 esleektlelevcenelqrk.....k 79 
                  +l+  t ele+  +e+ r+     +
  KHJ31109.1 242 CQLSRSTVELEKKIDEIYRNsdaliN 267
                 33333333333333333333222220 PP

  == domain 2  score: -10.8 bits;  conditional E-value: 3
        Fez1 114 a...................................lesdeakaqrqe.............aeeleelkreverlraeLkeerqkkeeqassFeqERrt 164
                 +                                   +          +             + + e+lk e++++++  +   ++ e+q+ +F  ER+ 
  KHJ31109.1 620 QsrpfsiprqrsslnqssderlvyqkffkleaelisE----------KersarfekeiierKLTEEKLKTEIDEVNSTKRDLLKNLEAQQREFIVERKS 708
                 0223333222222333333333344444444332221..........0222223333343333445555556666666666666666666667777776 PP

        Fez1 165 WqeeKekVir 174
                  ++e  +V  
  KHJ31109.1 709 LATEIKRVQA 718
                 6666666643 PP

  == domain 3  score: 21.1 bits;  conditional E-value: 5.8e-08
        Fez1  11 EislLKqQLkdsqaevtqklseivalkaqlrelrakleekeeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsle 109
                 E+  +K+ L+ ++ +  q  + +v+++++l e++++l++ e++  e ++ l+e  ++   +e el+ ++ + +  r+k+  +e +l++l+++ls+ +++
  KHJ31109.1 840 ELESVKKDLQAAKCNSDQTHNTLVEVRSELSEVKERLQADESKCYESQKILDESYAKFTALERELSDERLQLSSARKKIIDYEIDLESLKKKLSDEENR 938
                 45568999999999********************************************************************************96544 PP

        Fez1 110 eeeaalesdeakaqrqe..aeeleelkreverlrae 143
                 +++ +++s+ ++a r +  ++e+e+ +++ e  +a+
  KHJ31109.1 939 SSS-MKDSQFTQASRIDflEKEIEAHRSKNEAFQAQ 973
                 333.33333333444334433444444444444433 PP

  == domain 4  score: -3.9 bits;  conditional E-value: 2.6
        Fez1   73 nelqrkkseaellrekvekleee 95  
                     ++ + +a   rek +++++e
  KHJ31109.1 1108 YTAKKYSRDARSYREKFQSAQKE 1130
                  22222222233333333333333 PP

  == domain 5  score: -1.7 bits;  conditional E-value: 0.57
        Fez1   73 nelqrkkseaellrekvekleeelkelreelselsleeeeaalesdeakaqrqeaeeleelkreverlraeLk 145 
                    l+++  +        ++ ++ l++  + ++++s++++++ l+s++ k+q      ++e+  +++  ++++k
  KHJ31109.1 1290 RTLSKNLRTRRDS----NNSKKSLASASSIIKSNSTSTDTTFLKSNN-KTQ------TAEEGTDINANNSSMK 1351
                  2222222222222....222222222222222222222222222222.111......2222222222222222 PP

>> DinI  DinI-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.51     3e+03      13      32 ..     132     151 ..     128     170 .. 0.82
   2 ?    0.1   0.0      0.18   1.1e+03      10      29 ..     249     268 ..     244     275 .. 0.80
   3 ?    9.9   0.0   0.00015      0.92      12      53 ..     455     493 ..     453     495 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.51
                 HHHHHHH-SS-EEEEEEESS CS
        DinI  13 skRiqevfPdaevrvrkasa 32 
                 s  +q+++ ++ev +r as+
  KHJ31109.1 132 SDEVQKRWTEIEVIIRAAST 151
                 56789999999999999886 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.18
                 HHHHHHHHHH-SS-EEEEEE CS
        DinI  10 aELskRiqevfPdaevrvrk 29 
                  EL+k+i+e + ++   +  
  KHJ31109.1 249 VELEKKIDEIYRNSDALINL 268
                 7**********998776665 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00015
                 HHHHHHHH-SS-EEEEEEESS-EEEEES--HHHHHHHHHHHH CS
        DinI  12 LskRiqevfPdaevrvrkasanglsveGaskedkeriseiLQ 53 
                 L kR++++fP+ e+++r   +n  +++   k+d e + +iLQ
  KHJ31109.1 455 LGKRVEQNFPELELNIRGIDDNWPKIS---KQDLEEVFQILQ 493
                 89***************9999988888...888888888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1687  (0.0940934); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.02u 0.28s 00:00:01.30 Elapsed: 00:00:00.45
# Mc/sec: 9365.34
//
Query:       KHJ31110.1  [L=641]
Description: putative serine threonine-protein kinase cot-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-59  200.5   0.0      4e-58  196.8   0.0    2.0  1  Pkinase        Protein kinase domain
    1.5e-26   93.2   0.2    3.8e-21   75.5   0.0    2.2  2  Pkinase_Tyr    Protein tyrosine kinase
    1.5e-05   24.2   0.1    2.1e-05   23.6   0.1    1.3  1  Haspin_kinase  Haspin like kinase domain
    0.00012   21.6   0.4     0.0013   18.2   0.0    2.1  2  Kinase-like    Kinase-like
    0.00022   21.2   1.4      0.025   14.5   0.2    2.7  3  APH            Phosphotransferase enzyme family
     0.0013   18.1   0.1     0.0038   16.6   0.0    1.7  2  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
       0.04   13.0   0.0      0.066   12.3   0.0    1.2  1  Seadorna_VP7   Seadornavirus VP7
      0.074   13.2   0.1       0.16   12.2   0.1    1.6  1  U-box          U-box domain


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  196.8   0.0   1.8e-61     4e-58       1     264 []     258     561 ..     258     561 .. 0.95

  Alignments for each domain:
  == domain 1  score: 196.8 bits;  conditional E-value: 1.8e-61
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslsee 98 
                 y++++ +G+G+fG+V  + +k++gk +A+K + k+++ k+++  +v++E  il+++++p +v+ly++f+++d ly+++e+++gg+l+++l +  ++se+
  KHJ31110.1 258 YQTVKIIGKGAFGEVKLVQKKQDGKVYAMKSLIKHEMFKREQlAHVRAERDILAESDSPWVVKLYNTFQDQDFLYMLMEFLPGGDLMTMLIKYEIFSED 356
                 78899*********************************99999************************************************999***** PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS............................................ CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk............................................ 153
                  +++++++i+ +++ +H+ g+iHrD+Kp+NiL+d+ g++K+tDFGl++ +++ ++                                            
  KHJ31110.1 357 ITRFYIAEIVLAIDAVHKYGFIHRDIKPDNILLDRGGHVKLTDFGLSTGFHKLHDnsyyqnllqkkptkpvnrnsvnldqinltvsnrsvindwrksrr 455
                 **************************************************99988999***************************************** PP

                 ..BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGC CS
     Pkinase 154 ..ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpk 250
                   + s vgt++Y+APE+  +++y++ +D+WslG i++e   g ppf +e+++++++k+++            ++ +p + ++ +ea +l+++l++ +++
  KHJ31110.1 456 tmAYSTVGTPDYIAPEIFLGQGYGQDCDWWSLGTIMFECQIGWPPFCAEDSHDTYRKIVNW---------RHTLYFPDDVQLGPEAENLIRSLICNTEN 545
                 *999*******************************************88877766666665.........5577899****************998766 PP

                 C..STTHHHHHTSGGG CS
     Pkinase 251 k..Rltaeellqhpyl 264
                 +  R +a+e+++h+++
  KHJ31110.1 546 RlgRGSADEIKAHQFF 561
                 444888********98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.5   0.0   1.7e-24   3.8e-21       3     167 ..     260     422 ..     258     437 .. 0.82
   2 !   15.8   0.0   2.8e-06    0.0063     156     228 ..     452     524 ..     427     556 .. 0.79

  Alignments for each domain:
  == domain 1  score: 75.5 bits;  conditional E-value: 1.7e-24
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE..STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtl..keeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  + k +G+GafG+V   + k++ +      a+K+l  +e  ++e+ +++  e +i+ + + p +vkl+    +++ l++++e+++gGdL ++L k   e
   KHJ31110.1 260 TVKIIGKGAFGEVKLVQKKQDGKVY----AMKSLikHEMFKREQLAHVRAERDILAESDSPWVVKLYNTFQDQDFLYMLMEFLPGGDLMTMLIKY--E 351
                  5689*********999988444444....555554234566677889999*******************************************98..5 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET..TTSSEEEETTSSTS CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi..ekddeyvkkeeakl 167
                   ++ + +  +++++  +++ +++  ++Hrd+   N+Ll+++ +vk++DfGL+      +d++y+++  +k 
   KHJ31110.1 352 IFSEDITRFYIAEIVLAIDAVHKYGFIHRDIKPDNILLDRGGHVKLTDFGLSTGFhkLHDNSYYQNLLQKK 422
                  666666666789****************************************8763334555555555555 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 2.8e-06
                  SSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BBT CS
  Pkinase_Tyr 156 ddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevlekl.kegkrlekpe 228
                  +++ +++ ++     ++apE++  + + +  D Ws G++++E    g  p+   +++++++k+ + ++ l  p+
   KHJ31110.1 452 KSRRTMAYSTVGTPDYIAPEIFLGQGYGQDCDWWSLGTIMFECQI-GWPPFCAEDSHDTYRKIvNWRHTLYFPD 524
                  555566667777889***************************765.9999999988888888745555555555 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.1   9.5e-09   2.1e-05     175     255 ..     314     404 ..     193     422 .. 0.70

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 9.5e-09
  Haspin_kinase 175 k........pdfyseqqlflvlllkd.kGtdLeev..klkswkqalsifwqivkiLyv.aEtkfeFEHRdLhldniLvdknlnvtlidlklsR 255
                    +             ++q fl++l+++  G dL ++  k + +++    f+    +L++ a  k+ F HRd++ dniL+d+ ++v l d+ ls 
     KHJ31110.1 314 DspwvvklyNT--FQDQDFLYMLMEFlPGGDLMTMliKYEIFSEDITRFYIAEIVLAIdAVHKYGFIHRDIKPDNILLDRGGHVKLTDFGLST 404
                    25555443222..2455666666665347788887567777888888888776677643678***************************9985 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1     0.089     2e+02      34     108 ..     204     281 ..     192     301 .. 0.75
   2 !   18.2   0.0   5.6e-07    0.0013     141     189 ..     354     401 ..     329     407 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.089
  Kinase-like  34 qetgeplavkvfllpseaskkdlerlkeqelairllrgknpeqAkdhlrlllpfd......lvkiqkkkpfiqlk..skesiy 108
                  +++  ++ v++  ++++ s  +l + +++++  +       +q +++lr+l   d       vki +k  f ++k  +k++++
   KHJ31110.1 204 VKRARDRNVRQCEMEQRLSDPNLSQSRREQIWSNT-----GRQEGRYLRFLRTKDtpdnyqTVKIIGKGAFGEVKlvQKKQDG 281
                  567789999999*************9999998888.....7889999999987652222225888888777655422444444 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 5.6e-07
  Kinase-like 141 letiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggft 189
                   e+i r ++ ++++  +   +++g +h ++++dn+lld+ g ++l++f+
   KHJ31110.1 354 SEDITRFYI-AEIVLAIDAVHKYGFIHRDIKPDNILLDRGGHVKLTDFG 401
                  577888899.788888899****************************96 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       1.8     4e+03      25      49 ..     204     228 ..     189     250 .. 0.66
   2 !    4.9   0.0    0.0095        21      34      84 ..     297     345 ..     260     361 .. 0.73
   3 !   14.5   0.2   1.1e-05     0.025     165     196 ..     374     403 ..     355     412 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.8
                 EEEE-TTS-HHHHHHHHHHH.HHHHH CS
         APH  25 lrrnpparaaeeirrevall.rlLak 49 
                 ++r++++ + ++++ e++l   +L++
  KHJ31110.1 204 VKRARDR-NVRQCEMEQRLSdPNLSQ 228
                 5666666.777777777766444444 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0095
                 HHHHHHHHHHHHHHHHTT-B.--B-CTTBS-EEETTEEEEEEE----EE-SS CS
         APH  34 aeeirrevallrlLakagvp.vPevlagdtddeeigllfalieyvpgrsllr 84 
                  e+++   a+ + La+++ p v +++      +++ +l+ l+e++pg +l +
  KHJ31110.1 297 REQLAHVRAERDILAESDSPwVVKLYN---TFQDQDFLYMLMEFLPGGDLMT 345
                 456666777788888887732445555...7777777888999999998877 PP

  == domain 3  score: 14.5 bits;  conditional E-value: 1.1e-05
                 -EEEE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 165 ptvllHgDlhpgNllvdpddgrvtGviDfeda 196
                 + +++H+D++p+N+l+d ++g+v  + Df+++
  KHJ31110.1 374 KYGFIHRDIKPDNILLD-RGGHV-KLTDFGLS 403
                 579**************.76776.57777765 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.5   3.3e+03      53      79 ..     263     289 ..     221     302 .. 0.62
   2 !   16.6   0.0   1.7e-06    0.0038     103     166 ..     341     400 ..     329     420 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.5
         Kdo  53 lgrtravrEfrllkrLeeagvavpkpv 79 
                 +   +a+ E++l+++ ++ +v ++k +
  KHJ31110.1 263 IIGKGAFGEVKLVQKKQDGKVYAMKSL 289
                 455567777777777777777777665 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 1.7e-06
         Kdo 103 qdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDl 166
                  dL ++l k++ ++e  +r  + ++  +i   h+ g  H+d+ + nill+ ++    ++ l D+
  KHJ31110.1 341 GDLMTMLIKYEIFSEDITRFYIAEIVLAIDAVHKYGFIHRDIKPDNILLDRGG----HVKLTDF 400
                 589999999888***************************************99....7878777 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0     3e-05     0.066     154     209 ..     369     422 ..     354     446 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3e-05
  Seadorna_VP7 154 LmdfhsestnllhGDcnpenlmcDknGylklvDPvsLlertvvyvnieYesltqea 209
                   +  +h  + + +h D++p+n++ D+ G +kl D +          n +Y++l q++
    KHJ31110.1 369 IDAVH--KYGFIHRDIKPDNILLDRGGHVKLTDFGLSTGFHKLHDNSYYQNLLQKK 422
                   55566..6789**********************98777777777788888877765 PP

>> U-box  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   7.2e-05      0.16      30      72 ..     414     455 ..     402     456 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 7.2e-05
                 HHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHHHHHHHHHCT CS
       U-box  30 tiekhllsrdktdPftrepltqdqlipnlelKekIdefleekr 72 
                   ++ l++ ++t P++r+ ++ dq+    + +  I+ + +++r
  KHJ31110.1 414 YYQNLLQK-KPTKPVNRNSVNLDQINLTVSNRSVINDWRKSRR 455
                 55556666.*****************************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (641 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 4467.66
//
Query:       KHJ31111.1  [L=296]
Description: putative ribonuclease p 40kda subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.5e-55  187.0   0.0    5.6e-55  186.6   0.0    1.0  1  Ribonuc_P_40  Ribonuclease P 40kDa (Rpp40) subunit


Domain annotation for each model (and alignments):
>> Ribonuc_P_40  Ribonuclease P 40kDa (Rpp40) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.6   0.0   3.1e-59   5.6e-55       2     257 ..      31     268 ..      30     274 .. 0.86

  Alignments for each domain:
  == domain 1  score: 186.6 bits;  conditional E-value: 3.1e-59
  Ribonuc_P_40   2 eLlekeFiekyikkGsvlalSletridsdnvvallpsGtLtLsldketYerlGLeGkpsrfggrk..kqryvveldLrsksfkhgkkgfeRlrwalk 96 
                   +Lle++F+++yikkG++l+lS e++i+++nv+ l++ G+L+L+ld+ +Ye +GL+Gkp    + +  k+r++ve+d r++s++hgkkgf+R++ a++
    KHJ31111.1  31 ALLEEDFFNEYIKKGNILMLS-EGQIGAGNVYFLKE-GKLRLHLDRKSYESAGLVGKPDGTMASQgiKKRWMVEIDFRQPSMLHGKKGFNRIIYAFE 125
                   79*******************.**************.********************8887776667****************************** PP

  Ribonuc_P_40  97 nvlklkfdllfavnpnesskgaedpssklkslkkkpeikecepsiktttlrdvlvPklekdeeeseyseek.eledsalellEwLglvslgsertna 192
                   +vl + +++l+ +n n ++ +  dp   +k++     +k++++ i +t  + v+ P+l++        e++ e++  a+e++EwL+l+ l+s+r+ +
    KHJ31111.1 126 KVLVHPVTWLL-CNLNLTTPT-PDP--LDKHF----PVKKTATPI-ITRNKIVNKPSLQPP------PETNlEFDYFAMETHEWLSLIMLDSPRVCT 207
                   **********9.999666444.232..34444....455555555.355566677777443......2446678999******************** PP

  Ribonuc_P_40 193 ddaideylssYelpeseekvsevtsvswtGlitpeeiselleklrravkeskaapWvaltvhGFa 257
                   +d id++ls+Y+ p  e+++s+++++ w+G+i+p+  ++l++ +  a+   ++  W++++++GF+
    KHJ31111.1 208 NDVIDPVLSRYCPP-GETTESKLAKIVWRGFISPSSAHKLFKDILLATP--RE-FWFTINISGFP 268
                   ***********999.666888***********************99755..33.6*********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       268  (0.0149478); expected 358.6 (0.02)
Passed bias filter:                      254  (0.014167); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 2211.79
//
Query:       KHJ31112.1  [L=175]
Description: putative hit domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-18   66.8   0.0    3.4e-18   66.2   0.0    1.3  1  HIT              HIT domain
      3e-06   27.7   0.0    5.7e-06   26.8   0.0    1.4  1  DcpS_C           Scavenger mRNA decapping enzyme C-term bindi
    8.5e-05   22.4   0.2    0.00016   21.6   0.0    1.5  2  CwfJ_C_1         Protein similar to CwfJ C-terminus 1
  ------ inclusion threshold ------
      0.034   14.2   0.2        7.5    6.7   0.1    2.2  2  SASP             Small, acid-soluble spore proteins, alpha/be
      0.095   12.0   0.0       0.12   11.6   0.0    1.1  1  Glyco_hydro_98M  Glycosyl hydrolase family 98


Domain annotation for each model (and alignments):
>> HIT  HIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.2   0.0   9.6e-22   3.4e-18       5      95 ..      34     124 ..      31     127 .. 0.96

  Alignments for each domain:
  == domain 1  score: 66.2 bits;  conditional E-value: 9.6e-22
                 -CCEEEE-SSEEEEE-SS-SSSSEEEEEESSTGCSGGGCCHHHHHHHHHHHHHHHHHHHTCTTCCCEEEEEEESGGGT-SSSS-EEEEEEC CS
         HIT   5 pstvvyeddlvlafldidpkapghlLvipkkhlselhdlteeelakllsavkkvakalqkkfknkglrvvinngahagqsvahlHiHvipr 95 
                 p+ v++ ++l+lafldi p + gh+L+i+++h ++++d++eee  +l +   k+  al ++      ++v nnga+a q+v+h+H+H+ipr
  KHJ31112.1  34 PAYVLLSTPLCLAFLDILPLSSGHVLLITRQHREKITDVKEEESRELGVWLSKLSGALARVTDVWDWNIVQNNGAAAAQVVNHIHFHIIPR 124
                 6779999******************************************************9999*************************8 PP

>> DcpS_C  Scavenger mRNA decapping enzyme C-term binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0   1.6e-09   5.7e-06      11     104 ..      32     126 ..      24     135 .. 0.84

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 1.6e-09
                 SS-B-EEEE-SSEEEEE-SS-SSSEEEEEEESS---SGGG--TTTTTHHHHHHHHHHHHHHHTT-T.-EEEEE--SCCCT--S-S--EEEEE... CS
      DcpS_C  11 kepervvyedekfvvlkDikpkaklhllvipkrdikslrdLtkehlpllkemrekakkvieekyne.vdaeelrvgvhyqPsvyhlHlHvisldf 104
                  +p+ v++++  ++++ Di p ++ h+l i +++ ++++d+++e+   l     k+  ++ +           + g  +++ v+h+H+H+i   +
  KHJ31112.1  32 SPPAYVLLSTPLCLAFLDILPLSSGHVLLITRQHREKITDVKEEESRELGVWLSKLSGALARVTDVwDWNIVQNNGAAAAQVVNHIHFHIIPRPA 126
                 457788899999********************************9999999999999999988865555567789***************97665 PP

>> CwfJ_C_1  Protein similar to CwfJ C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.2       3.6   1.3e+04      11      17 ..       4      10 ..       2      12 .. 0.80
   2 !   21.6   0.0   4.3e-08   0.00016      42     115 ..      51     130 ..      31     137 .. 0.77

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 3.6
                HHH-S-- CS
    CwfJ_C_1 11 ldsClfC 17
                + +C fC
  KHJ31112.1  4 TTDCPFC 10
                678***9 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 4.3e-08
                 S-SSTT-EEEEESS--SSTTSS-HHHHHHHHHH....HHHHHHHHHHTT--EEEEEE-..SSS-----EEEEE--HHHHT CS
    CwfJ_C_1  42 gpLssgHvliipieHisallsldeevldeirkf....rkalvkmykkqdkdavvfEis..sersvHlaiqvipvpksisk 115
                  pLssgHvl+i+ +H+++ + ++ee+  e+  +      al+++ +  d ++v    +   +   H++ ++ip p+ + +
  KHJ31112.1  51 LPLSSGHVLLITRQHREKITDVKEEESRELGVWlsklSGALARVTDVWDWNIVQNNGAaaAQVVNHIHFHIIPRPALTPE 130
                 689**********************9999876621115577888888888888877667678889999999998876655 PP

>> SASP  Small, acid-soluble spore proteins, alpha/beta type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0046        17       7      29 ..      64      86 ..      60     113 .. 0.85
   2 ?    6.7   0.1    0.0021       7.5       4      27 ..     148     171 ..     145     174 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0046
                GGHHHHHHHHHHHHHHHT---ST CS
        SASP  7 eakeaLdqlKyEvAaElGvslgk 29
                + +e++   K E  +ElGv l+k
  KHJ31112.1 64 QHREKITDVKEEESRELGVWLSK 86
                67899999***********9854 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0021
                 SSGGGHHHHHHHHHHHHHHHT--- CS
        SASP   4 lvpeakeaLdqlKyEvAaElGvsl 27 
                 +  ea e  ++lK E+ +E ++s+
  KHJ31112.1 148 VHHEAAELVKKLKLEIEKETNISN 171
                 667999999************996 PP

>> Glyco_hydro_98M  Glycosyl hydrolase family 98
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   3.5e-05      0.12     212     250 ..      70     108 ..      56     122 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.5e-05
  Glyco_hydro_98M 212 aeieDtesevlGlyLsgycgnyGvrtDetkWyeksadgg 250
                      + +++ es  lG++Ls ++g     tD + W   +++g+
       KHJ31112.1  70 TDVKEEESRELGVWLSKLSGALARVTDVWDWNIVQNNGA 108
                      3344589************************87765544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1304.59
//
Query:       KHJ31113.1  [L=175]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.16   10.0   0.0       0.16   10.0   0.0    1.6  2  Totivirus_coat  Totivirus coat protein


Domain annotation for each model (and alignments):
>> Totivirus_coat  Totivirus coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   2.8      0.16   2.8e+03     714     751 ..      27      64 ..       8      71 .. 0.60
   2 ?   10.0   0.0   8.9e-06      0.16      17      75 ..      93     148 ..      80     157 .. 0.71

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 0.16
  Totivirus_coat 714 pppalgaaagdapsppssgsslaasaeapaepeppaae 751
                      pp  +++++ ++ p+s+++++ +  +++ + + p ae
      KHJ31113.1  27 SPPIASLSPPSNTEPQSKTLDNRQILKPVTPSKRPIAE 64 
                     34445556666667777777777777766666555554 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 8.9e-06
  Totivirus_coat  17 lttyRrYrarlrtrstirgnvqatttsifyevgrryn.kaeevlaavaeeavlldcsypt 75 
                     +  +R ++arl ++ t+  n ++t  + +yev +      ++ l+++ ++ +++d    t
      KHJ31113.1  93 QLRERTWHARLMICTTAISNIDSTLKKFQYEVEKEEVvAFKAYLRPAIANFAAVD----T 148
                     5679****************************87622133444444444444444....3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       459  (0.025601); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1338.23
//
Query:       KHJ31114.1  [L=1170]
Description: putative carbamoyl-phosphate synthase arginine-specific large chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   3.8e-110  366.4   0.0    8.8e-85  283.5   0.0    2.3  2  CPSase_L_D2      Carbamoyl-phosphate synthase L chain, ATP bi
    8.8e-42  142.3   0.0    4.2e-41  140.1   0.0    2.3  3  CPSase_L_D3      Carbamoyl-phosphate synthetase large chain, 
    4.8e-19   68.7   0.2    5.7e-09   35.8   0.0    2.4  2  Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
    2.4e-18   66.3   0.0    2.6e-08   33.7   0.0    2.7  3  ATP-grasp        ATP-grasp domain
    2.2e-14   53.3   0.0    1.2e-07   31.5   0.0    2.7  2  ATPgrasp_Ter     ATP-grasp in the biosynthetic pathway with T
    1.9e-06   27.5   0.1     0.0076   15.7   0.1    2.5  2  ATP-grasp_5      ATP-grasp domain
    4.5e-05   23.3   0.1       0.43   10.3   0.0    2.6  2  GARS_A           Phosphoribosylglycinamide synthetase, ATP-gr
    5.3e-05   22.9   0.1      0.043   13.4   0.0    2.6  2  RimK             RimK-like ATP-grasp domain
  ------ inclusion threshold ------
      0.045   13.9   0.1       0.29   11.3   0.0    2.4  2  MGS              MGS-like domain


Domain annotation for each model (and alignments):
>> CPSase_L_D2  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  283.5   0.0   4.4e-88   8.8e-85       1     210 [.     212     415 ..     212     416 .. 0.99
   2 !   80.6   0.0   5.3e-26   1.1e-22       2     207 ..     750     954 ..     749     957 .. 0.88

  Alignments for each domain:
  == domain 1  score: 283.5 bits;  conditional E-value: 4.4e-88
                  SHHHHHHHHHHTT-BBSSEECSSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSSEEEEEE CS
  CPSase_L_D2   1 DkesakealkkinvpvvpssaapvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkgpkeiEve 98 
                  D++ +++al++in+p+++s+a+  ++++eal++akeigyP+i++aa++lGG+G+++a+ne+el+++ +++l+ +      +q+l+ekslkg+keiE+e
   KHJ31114.1 212 DRDLFAKALEEINIPIAKSVAV--DSVDEALRAAKEIGYPIIVRAAYALGGLGSGFAHNEDELRNMSARSLTLS------PQILIEKSLKGWKEIEYE 301
                  99*******************9..**************************************************......8***************** PP

                  EEEETTS-EEEEEEEEECCEC..TCCCCEEEES-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEEEETTTTEEEEEEEESS--CCHHHHHHHHS-- CS
  CPSase_L_D2  99 vlrDakgnvitvcerenslql..rtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpkskeyyviEvNtRlsvesalaekaTGld 194
                  v+rDa++n+itvc++en+++l  +t+++i+vAPsqtL+dee+++lr+aa+k+vr++gvvg+++v+++l+p+  +y viEvN+Rls++sala+kaTG++
   KHJ31114.1 302 VVRDASNNCITVCNMENFDPLgiHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVVGECNVQYALQPDGLDYRVIEVNARLSRSSALASKATGYP 399
                  ************************************************************************************************** PP

                  HHHHHHHHHTT--GCG CS
  CPSase_L_D2 195 lvkeaakialgekLee 210
                  l+++aaki+lg++L+e
   KHJ31114.1 400 LAYTAAKIGLGHTLPE 415
                  **************97 PP

  == domain 2  score: 80.6 bits;  conditional E-value: 5.3e-26
                  HHHHHHHHHHTT-BBSSEECSSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSSEEEEEEE CS
  CPSase_L_D2   2 kesakealkkinvpvvpssaapvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkgpkeiEvev 99 
                  +++++++l+ i+++    ++   +++ +a a+a+e+gyPv++++++ l G  m v++ +eel++ +k+a++ ++    +  v v ++l+   ei+++ 
   KHJ31114.1 750 RQKFSQILDSIGIDQPAWKNL--TSVADAEAFANEVGYPVLVRPSYVLSGAAMTVVYGKEELKAKLKAASRVSP----DYPVVVTQFLEDAEEIDIDA 841
                  788889999998887666666..999***********************************************6....999***************** PP

                  EEETTS-EEEEEEEEECCEC..TCCCCEEEES-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEEEETTTT....EEEEEEEESS--CCHHHHHHHH CS
  CPSase_L_D2 100 lrDakgnvitvcerenslql..rtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpksk....eyyviEvNtRlsvesalaekaT 191
                  +  + + +i+    e + q   + ++   v P   L++++ ++lr+ a kv+++ +++g  +++ +  ++++    +  viE N R s++ +  +ka 
   KHJ31114.1 842 IGSNGELIIHAV-SEHVEQAgiHSGDATLVIPPVNLDKNTMNELRKIASKVANAFKITGPFNMQIIKAKNHNggpySLKVIECNLRASRSFPFVSKAL 938
                  *97766666655.566666668******************************************9876633222225679****************** PP

                  S--HHHHHHHHHTT-- CS
  CPSase_L_D2 192 Gldlvkeaakialgek 207
                  G++ + +a k  lg++
   KHJ31114.1 939 GVNFIDIATKALLGQD 954
                  ******9999888876 PP

>> CPSase_L_D3  Carbamoyl-phosphate synthetase large chain, oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       8.4   1.7e+04      57      71 ..     234     248 ..     216     249 .. 0.70
   2 ?   -2.9   0.0       4.2   8.3e+03      30      44 ..     436     450 ..     434     461 .. 0.86
   3 !  140.1   0.0   2.1e-44   4.2e-41       2     122 .]     500     622 ..     499     622 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 8.4
  CPSase_L_D3  57 eldeellreakklGf 71 
                  +  +e+lr ak+ G+
   KHJ31114.1 234 DSVDEALRAAKEIGY 248
                  446788999999998 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 4.2
  CPSase_L_D3  30 ltkidpwFLekleel 44 
                  +tki +w L+k++++
   KHJ31114.1 436 VTKIPRWDLNKFQHV 450
                  79*********9986 PP

  == domain 3  score: 140.1 bits;  conditional E-value: 2.1e-44
  CPSase_L_D3   2 elkeptdeRifaiaeal.rrglsveeiheltkidpwFLekleelvelekelkkkkk..eldeellreakklGfsDkqiaelleeeeeeevrelrkklg 96 
                  el++ptd+R +a+ +a+ ++g+sv++ihel+kid+wFL+kle++v++ +el+++ +  +++e l+ +akk+GfsD+qia+ ++ ++e+evr+ rk+lg
   KHJ31114.1 500 ELQNPTDRRWLAVGQAMlHEGYSVDRIHELSKIDKWFLYKLENIVNCTHELENAGNllQIKEGLMSKAKKMGFSDRQIAKAVG-STEDEVRDRRKNLG 596
                  699**************9************************************9999**********************987.78888********* PP

  CPSase_L_D3  97 ilpvykrvDtcAaeFeaetpYlYstY 122
                  ++p +k++Dt+AaeF+a+t+YlY+tY
   KHJ31114.1 597 VTPFVKKIDTLAAEFPASTNYLYTTY 622
                  *************************9 PP

>> Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   1.3e-10   2.5e-07      30     173 ..     241     382 ..     220     384 .. 0.85
   2 !   35.8   0.0   2.8e-12   5.7e-09       4     154 ..     759     900 ..     756     916 .. 0.84

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 1.3e-10
                      HHHHHC-SSEEEEESSSSTTTTEEEESSGGGHHHHHHHHHTT-SCEEEEE--.ESEEEEEEEEETSSCEEEEEEEEE-SSSSS-HHHHHC.TT- CS
  Dala_Dala_lig_C  30 kveeelgypvfVKpareGSSvGvskveseeelkeaieeafkydekvlvEeai.egreievavlgneklevsevgeivvkkgfydyeakysddka 122
                      +  +e+gyp++V++a +   +G   +++e+el+++ ++++    ++l+E+ +   +eie  v+ + ++++ +v ++    + +d    +++d++
       KHJ31114.1 241 RAAKEIGYPIIVRAAYALGGLGSGFAHNEDELRNMSARSLTLSPQILIEKSLkGWKEIEYEVVRDASNNCITVCNM----ENFDPLGIHTGDSI 330
                      457899***********99*********************************6679********777777766554....45666666778999 PP

                      EEESS----HHHHHHHHHHHHHHHHHTT--SEEEEEEEEETTT.EEEEEEEE CS
  Dala_Dala_lig_C 123 qlevpaklekeveekiqelalkaykaldlrGlaRvDfflteeg.eivlnEvN 173
                       +    +l++e+++ ++++a+k+ + l++ G + v + l+ +g +  + EvN
       KHJ31114.1 331 VVAPSQTLSDEEYHMLRTAAIKIVRHLGVVGECNVQYALQPDGlDYRVIEVN 382
                      9999999********************************9999445677887 PP

  == domain 2  score: 35.8 bits;  conditional E-value: 2.8e-12
                      HTT--B--EEEEETTHHCH-H-HHHHHHHHHC-SSEEEEESSSSTTTTEEEESSGGGHHHHHHHHHTT..-SCEEEEE--.ESEEEEEEEEE.T CS
  Dala_Dala_lig_C   4 aaGlpvvpyvvlekeeakeekkellekveeelgypvfVKpareGSSvGvskveseeelkeaieeafky..dekvlvEeai.egreievavlg.n 93 
                      + G+ +++++ l++ +         e+  +e+gypv+V+p+   S   ++ v  +eelk+ +++a +   d+ v+v +++ +++ei++  +g n
       KHJ31114.1 759 SIGIDQPAWKNLTSVAD-------AEAFANEVGYPVLVRPSYVLSGAAMTVVYGKEELKAKLKAASRVspDYPVVVTQFLeDAEEIDIDAIGsN 845
                      55555555555555444.......3456899*********************************987544999*******99******999989 PP

                      SSCEEEEEEEEE-SSSSS-HHHHHC.TT-EEESS----HHHHHHHHHHHHHHHHHTT--SE CS
  Dala_Dala_lig_C  94 eklevsevgeivvkkgfydyeakysddkaqlevpaklekeveekiqelalkaykaldlrGl 154
                      ++l ++ v e+v + g+       s+d++ +  p++l+k++ ++++++a k+ +a +++G 
       KHJ31114.1 846 GELIIHAVSEHVEQAGIH------SGDATLVIPPVNLDKNTMNELRKIASKVANAFKITGP 900
                      99************9996......5677778999*****************9999888875 PP

>> ATP-grasp  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.0   1.3e-11   2.6e-08       2     147 ..     221     371 ..     220     387 .. 0.85
   2 ?   -2.9   0.0       2.1   4.2e+03     155     168 ..     723     736 ..     720     738 .. 0.83
   3 !   29.5   0.0   2.4e-10   4.8e-07       3     145 ..     759     907 ..     757     926 .. 0.89

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 1.3e-11
                 HTTT--B-EEEEECCHHHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHC..GTTCEEEEE----SEEEEEEEEEETTC-EEE--EEEE CS
   ATP-grasp   2 eklglpvprflaveskeeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqaleal..keekvivEefvpfekElsvlvvrsaeGetafypvvet 98 
                 e+ ++p+++ +av+s +e+ +aa+e+g+p++v+ +  +  G G+ + ++e++l+++ +     + ++++E+  +  kE+   vvr+a+ +  ++  +e+
  KHJ31114.1 221 EEINIPIAKSVAVDSVDEALRAAKEIGYPIIVR-AAYALGGLGSGFAHNEDELRNMSARSltLSPQILIEKSLKGWKEIEYEVVRDASNNCITVCNMEN 318
                 7899*****************************.8999****************998877778999*********************999999999999 PP

                 EEETTEEE...EEEECEE-SCHHHHHHHHHHH.HHHHHHTSSEEEEEEEEEET CS
   ATP-grasp  99 vqedgilr...lsvapaevsekaqkkaeeiak.kiveeLggvGvfavElFvle 147
                     gi     ++vap++  ++++ +  ++a+ kiv++Lg+vG   v   ++ 
  KHJ31114.1 319 FDPLGIHTgdsIVVAPSQTLSDEEYHMLRTAAiKIVRHLGVVGECNVQYALQP 371
                 999988743337899988777766555555444**********8887765555 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.1
                 EEESS--GGGGGHH CS
   ATP-grasp 155 ElapRpHnsGhvtl 168
                  +a R H+sG v +
  KHJ31114.1 723 NIALRLHESGEVRI 736
                 589*******8865 PP

  == domain 3  score: 29.5 bits;  conditional E-value: 2.4e-10
                 TTT--B-EEEEECCHHHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHC....GTTCEEEEE----SEEEEEEEEEETTC-EEE--EEE CS
   ATP-grasp   3 klglpvprflaveskeeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqaleal....keekvivEefvpfekElsvlvvrsaeGetafypvve 97 
                 + g+  p +  ++s +++e++a+e+g+pv+v+ +    +G   +vv  +e+l+  l+a+     + +v+v +f +   E+ +  +   +Ge  + +v e
  KHJ31114.1 759 SIGIDQPAWKNLTSVADAEAFANEVGYPVLVR-PSYVLSGAAMTVVYGKEELKAKLKAAsrvsPDYPVVVTQFLEDAEEIDI-DAIGSNGELIIHAVSE 855
                 678999**************************.99999***************9999998888899*********9999985.566789********** PP

                 EEEETTE....EEEEEECEE-SCHHHHHHHHHHHHHHHHHTSSEEEEEEEEE CS
   ATP-grasp  98 tvqedgi....lrlsvapaevsekaqkkaeeiakkiveeLggvGvfavElFv 145
                 +v++ gi      l++ p +++++  ++ ++ia+k+++++ + G f + +  
  KHJ31114.1 856 HVEQAGIhsgdATLVIPPVNLDKNTMNELRKIASKVANAFKITGPFNMQIIK 907
                 **997762222679*******************************9987755 PP

>> ATPgrasp_Ter  ATP-grasp in the biosynthetic pathway with Ter operon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   6.2e-07    0.0012      49     119 ..     346     419 ..     335     430 .. 0.79
   2 !   31.5   0.0     6e-11   1.2e-07       4     116 ..     824     958 ..     822     971 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 6.2e-07
  ATPgrasp_Ter  49 lielaerlaeefgldglvnvQvrededg..pkLLEiNpRasGGlg.ysalaGvnlpylalklllgleteeveep 119
                   l  +a ++++++g+ g  nvQ+  + dg  ++++E+N+R s      s ++G  l+y a+k  lg+  +e ++ 
    KHJ31114.1 346 LRTAAIKIVRHLGVVGECNVQYALQPDGldYRVIEVNARLSRSSAlASKATGYPLAYTAAKIGLGHTLPELPNA 419
                   557899******************9999889*********96555156777*************9855554444 PP

  == domain 2  score: 31.5 bits;  conditional E-value: 6e-11
  ATPgrasp_Ter   4 allvmeyLeg.pEySvDvlaekgevl.aavpRrKekgglq...........elekd..eelielaerlaeefgldglvnvQv...rededgp...kL 79 
                   +++v+++Le  +E+ +D +  +ge++  av    e+ g++           +l+k+  +el ++a+++a++f+++g +n+Q+   +++++gp   k+
    KHJ31114.1 824 PVVVTQFLEDaEEIDIDAIGSNGELIiHAVSEHVEQAGIHsgdatlvippvNLDKNtmNELRKIASKVANAFKITGPFNMQIikaKNHNGGPyslKV 920
                   67999999872679*******9999845777777766666677889999997776533799********************7544666666523368 PP

  ATPgrasp_Ter  80 LEiNpRasGGlgysala.Gvnlpylalklllgleteev 116
                   +E N Ras  +     a Gvn++++a k+llg++++ +
    KHJ31114.1 921 IECNLRASRSFPFVSKAlGVNFIDIATKALLGQDVPSP 958
                   9**********9766666**************754433 PP

>> ATP-grasp_5  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   3.8e-06    0.0076      17      53 ..     218     254 ..     198     257 .. 0.84
   2 !    9.1   0.0   0.00041      0.82      13      51 ..     751     789 ..     743     795 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 3.8e-06
  ATP-grasp_5  17 elleaygipvvetrlassaeeaveaaeeigypvvlKi 53 
                  + le ++ip++++  ++s++ea++aa+eigyp+ ++ 
   KHJ31114.1 218 KALEEINIPIAKSVAVDSVDEALRAAKEIGYPIIVRA 254
                  45889***************************98875 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00041
  ATP-grasp_5  13 aeakelleaygipvvetrlassaeeaveaaeeigypvvl 51 
                  ++  ++l+ +gi+ +  +  +s+++a + a+e+gypv +
   KHJ31114.1 751 QKFSQILDSIGIDQPAWKNLTSVADAEAFANEVGYPVLV 789
                  56689*******************************976 PP

>> GARS_A  Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00021      0.43       5     103 ..     216     307 ..     212     386 .. 0.78
   2 !   10.3   0.0   0.00022      0.43       8      96 ..     755     839 ..     749     862 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00021
                 HHHHHHHHTT--B--EEEESSHHHHHHHHHHHSSSEEEEEESC-GGGT-EEEESSHHHHHHHHHHHCTS-TTCCCCSSEEEEE---S.EEEEEEEEECT CS
      GARS_A   5 fakdllkkagiptaeyeaftdpeeakeyieeatakalVvKadglaagKgvivakseeealkavkeilekkkfGeagekvviEelleG.eEvsllalvdg 102
                 fak+ l++++ip+a+  a+++++ea    +e + ++ +v+a+   +g g   a++e+e  ++ +  l+       + +++iE+ l+G +E+   ++ d 
  KHJ31114.1 216 FAKA-LEEINIPIAKSVAVDSVDEALRAAKEIGYPI-IVRAAYALGGLGSGFAHNEDELRNMSARSLT------LSPQILIEKSLKGwKEIEYEVVRDA 306
                 4544.699****************************.99999999999*****999999988887775......5789999999999557777777775 PP

                 T CS
      GARS_A 103 k 103
                 +
  KHJ31114.1 307 S 307
                 4 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00022
                 HHHHHTT--B--EEEESSHHHHHHHHHHHSSSEEEEEESC-GGGT-EEEESSHHHHHHHHHHHCTS-TTCCCCSSEEEEE---S.EEEEE CS
      GARS_A   8 dllkkagiptaeyeaftdpeeakeyieeatakalVvKadglaagKgvivakseeealkavkeilekkkfGeagekvviEelleG.eEvsl 96 
                 ++l+ +gi  + ++++t++++a+++ +e++ ++  v+++ + +g  ++v+  +ee  + +k   +     +    vv+ ++le  eE+ +
  KHJ31114.1 755 QILDSIGIDQPAWKNLTSVADAEAFANEVGYPV-LVRPSYVLSGAAMTVVYGKEELKAKLKAASR----VSPDYPVVVTQFLEDaEEIDI 839
                 68999****************************.99**************999997776665443....345677888887764145555 PP

>> RimK  RimK-like ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0023       4.7      14      80 ..     223     290 ..     210     396 .. 0.70
   2 !   13.4   0.0   2.1e-05     0.043       1     144 [.     747     897 ..     747     947 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0023
                 TT-----EEEESS-S-HHHHHHTT-.-SSEEEEE-TTTT--EEEEE-SHHHHHHHHHH....GGG--EEEE CS
        RimK  14 akikvpntalardeedaekliekiklrfPvvvKsvegsqGikvvlakkeqklkqvlea....lkeailvqe 80 
                  +i++ ++  + + ++a +  ++i  + P++v+  ++  G++  +a++e++l+++ +a    l  +il+ +
  KHJ31114.1 223 INIPIAKSVAVDSVDEALRAAKEI--GYPIIVRAAYALGGLGSGFAHNEDELRNM-SArsltLSPQILIEK 290
                 446666666666666666666666..79*************************98.775655556666654 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 2.1e-05
                 HH-HHHHHHHHHHTT-----EEEESS-S-HHHHHHTT-.-SSEEEEE-TTTT--EEEEE-SHHHHHHHHHH.....GGG--EEEEE--SS-SEEEEEEE CS
        RimK   1 ardKlkslklLakakikvpntalardeedaekliekiklrfPvvvKsvegsqGikvvlakkeqklkqvlea.....lkeailvqeyieeaenediRvlv 94 
                 a+++ k  ++L   +i+ p  +   +  dae++ +++  + Pv+v+ ++   G  + +   +++lk  l+a      +  ++v +++e ae+ di  + 
  KHJ31114.1 747 AENRQKFSQILDSIGIDQPAWKNLTSVADAEAFANEV--GYPVLVRPSYVLSGAAMTVVYGKEELKAKLKAasrvsPDYPVVVTQFLEDAEEIDIDAIG 843
                 67888999*****************************..69************9999999999999999996664445567*****************9 PP

                 ETTEEE.EEEEEE--SSS----TTTT-EE...EE----....HHHHHHHHHHHHHCT- CS
        RimK  95 vddevv.aalrrvskeGdFRsnlhrGgva...eklqls....eeekelAikaakamel 144
                  ++e +  a+     e    + +h G ++    +++l+    +e++++A k+a+a ++
  KHJ31114.1 844 SNGELIiHAVSEH-VE---QAGIHSGDATlviPPVNLDkntmNELRKIASKVANAFKI 897
                 9999761333333.23...577788776511134555522225778888888887665 PP

>> MGS  MGS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.4   2.7e+03      17      48 ..     135     169 ..      89     228 .. 0.64
   2 ?   11.3   0.0   0.00015      0.29      33      94 ..    1070    1129 ..    1042    1130 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.4
                 EEEHHHHHHHHHT..T--EE.ECCCCHSTGSGGTH CS
         MGS  17 lATgGTakllkea..gipvt.evvektgegerlgg 48 
                 +AT  Ta++l+++   +pvt e v ++ e er++g
  KHJ31114.1 135 IATIQTAHILSDEvyYLPVTpEYVTYVIERERPDG 169
                 46666666666443344444234555555555554 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00015
                  EEECCCCHSTGSGGTHCHHHHHHHHTTSCCEEEEE--THHHHHHCHHHHHHHHHHHTTSHEE CS
         MGS   33 vtevvektgegerlggrveildaikngeidlvintlypfkatvakdgykirraaenidIplp 94  
                  + + +e+++ + + ++r  i +  ++++i+ v n++++++  +++ +y +rr a++++Ipl+
  KHJ31114.1 1070 SNTQIELVNIP-IDDKR-GIRQIFEQKKICGVFNLTQTRANSIHDVNYVMRRNAVDFGIPLF 1129
                  45555666666.55543.499999********************999*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1170 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.80u 0.25s 00:00:01.05 Elapsed: 00:00:00.42
# Mc/sec: 8430.34
//
Query:       KHJ31115.1  [L=200]
Description: putative translocation protein sec66 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.4e-74  246.9   0.5    1.1e-73  246.7   0.5    1.0  1  Sec66            Preprotein translocase subunit Sec66
  ------ inclusion threshold ------
       0.16   11.2   0.0       0.18   11.1   0.0    1.1  1  ABC2_membrane_2  ABC-2 family transporter protein


Domain annotation for each model (and alignments):
>> Sec66  Preprotein translocase subunit Sec66
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  246.7   0.5   1.2e-77   1.1e-73       1     179 [.       6     188 ..       6     189 .. 0.97

  Alignments for each domain:
  == domain 1  score: 246.7 bits;  conditional E-value: 1.2e-77
       Sec66   1 kvslytPliYvavligslatfsslyrkrkakklaelepwFpenlqrdiYlsllhl....ekkkeekvpekvlkAALLrravedirrilklreskpalev 95 
                 +v+l +P++Y+avl+gsl+tfss+yrkrka+++a+l+pwFp++ qrdiYlsll l     k+++  vp+++ +AALLrravedi ri+++r+ k+a+ +
  KHJ31115.1   6 WVGLSVPIAYIAVLVGSLVTFSSVYRKRKAAAAASLTPWFPPHVQRDIYLSLLYLepeeGKSSNFPVPDSLKRAALLRRAVEDIFRIIQIRNTKQACIT 104
                 799****************************************************99875666779********************************* PP

       Sec66  96 llqkGsvgddlwqrfqraekeleeElkdvvqeaealkpgWgqtifqsaneilanealrrrleeiekrkeeekeewekkkadiee 179
                  lq+Gs+gddlwq f+raeke+e+El+dvv ea+al+++Wgqtifqsanei+an+++r++leei++++++e ++wek+++ i++
  KHJ31115.1 105 SLQRGSIGDDLWQIFLRAEKEMEKELEDVVIEANALQSNWGQTIFQSANEIAANTTIRNSLEEIQSHVDSETKWWEKRRKYIQS 188
                 ******************************************************************************998886 PP

>> ABC2_membrane_2  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0     2e-05      0.18     169     253 ..      11     110 ..       2     156 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2e-05
  ABC2_membrane_2 169 vlllllvvflalglllSsvarssreaaalalglfvvlailvpivlygvaellagpavp................qeindflsllsptsayntll 246
                      v ++ + v+++  + +Ssv r+++ aaa++l  ++   +  +i l  +++l+ ++  +                + ++d+++++++ +  ++++
       KHJ31115.1  11 VPIAYIAVLVGSLVTFSSVYRKRKAAAAASLTPWFPPHVQRDIYL-SLLYLEPEEGKSsnfpvpdslkraallrRAVEDIFRIIQIRNTKQACI 103
                      33333335689999********************98888777777.444444444444567777777777777777777777777777777777 PP

  ABC2_membrane_2 247 neilags 253
                       ++  gs
       KHJ31115.1 104 TSLQRGS 110
                      6666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1053  (0.0587317); expected 358.6 (0.02)
Passed bias filter:                      689  (0.0384294); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 1610.16
//
Query:       KHJ31116.1  [L=638]
Description: putative nuclear protein localization protein 4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.3e-132  440.5   0.0   4.2e-132  440.2   0.0    1.1  1  NPL4      NPL4 family
    8.5e-68  227.1   0.1    1.5e-67  226.3   0.1    1.4  1  zf-NPL4   NPL4 family, putative zinc binding region
    8.7e-05   22.9   0.0    0.00028   21.3   0.0    1.9  1  UN_NPL4   Nuclear pore localisation protein NPL4


Domain annotation for each model (and alignments):
>> NPL4  NPL4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  440.2   0.0  7.1e-136  4.2e-132       1     308 []     285     605 ..     285     605 .. 0.96

  Alignments for each domain:
  == domain 1  score: 440.2 bits;  conditional E-value: 7.1e-136
        NPL4   1 RlgylyGryekydevPlGikavveaiyEPpqedeldgltlledeeekevdeiakklglekvGviftDlldagakdgtvlckRhkdsyflsslEvilaak 99 
                 R+gylyGry++y+evPlGikavveaiyEPpq++e dg+tl+e+e+++ +de+a+ +glekvGvi+tDlld+g++dgtv+ckRh+dsy+lsslE+++aa+
  KHJ31116.1 285 RFGYLYGRYSEYTEVPLGIKAVVEAIYEPPQSGEIDGITLTEWENKEGIDEVASLCGLEKVGVIWTDLLDSGKGDGTVFCKRHIDSYYLSSLEIVFAAR 383
                 9************************************************************************************************** PP

        NPL4 100 lqlkhpnvtkysetgkfsskFvtvvvsgdeegeieiesyqvsneaealvradiiepstdPslayvre......sseerYvpevfYkkkneyglevkena 192
                 lq+k+p++tk+s++gkf+s+ vt+v+sgd++++i i++yqvsn+a ++vradi+eps+dP  ++vr+      +++  Y+pevfY+++neyg +v+ena
  KHJ31116.1 384 LQAKYPKSTKWSDSGKFGSNLVTCVLSGDTSNQIAISAYQVSNSAIEMVRADIVEPSADPGKMLVRSehnedsNQSISYIPEVFYRRINEYGCSVQENA 482
                 ******************************************************************988887444449********************* PP

        NPL4 193 kPalPveyLlvslthgfpkepkplF.kkkakfpienRealgelqdlkelakylkssa......kkeleealsdfHlllylakleilskeelkllleavk 284
                 kP++PveyLlv+lthgfp++pkplF   +  fpienR+++g  qd+k+++k+l+  +           +a+sdfHll+yl++ + l+k+e++ll+ +++
  KHJ31116.1 483 KPSFPVEYLLVTLTHGFPSNPKPLFiAPDPGFPIENRSIIGIDQDIKAISKHLEFGKnlmgeePIFHISAVSDFHLLCYLHTFGWLDKNEEALLCLVAT 581
                 *************************777899**********************98877787644556799***************************** PP

        NPL4 285 ekdeekllelvesegwktlltile 308
                 ++de + ++l  ++gw+tl+++++
  KHJ31116.1 582 QHDEIEGKKLSYTSGWNTLVAVIQ 605
                 ********************9986 PP

>> zf-NPL4  NPL4 family, putative zinc binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.3   0.1   2.5e-71   1.5e-67       2     145 .]     139     282 ..     138     282 .. 0.99

  Alignments for each domain:
  == domain 1  score: 226.3 bits;  conditional E-value: 2.5e-71
     zf-NPL4   2 kedevDellekqdGkikrkrdeklcrhgekgmceycsplepydeeylkekkikhlsfhaylrklnekknkkesssskiapLeelsykvkkecksghapw 100
                  ++e+D++l+k+dG+i rkrd+k+crhgekgmc+yc+plep+d  y+++++ik lsfh+ylrk+n+++nk+ ++ss+++pL+e++y+vk++c+sgh++w
  KHJ31116.1 139 YQSELDDRLDKKDGRIIRKRDHKMCRHGEKGMCDYCMPLEPFDPGYMHDNNIKNLSFHSYLRKINSTTNKSGQGSSFMPPLSEPYYRVKNKCPSGHPEW 237
                 5899*********************************************************************************************** PP

     zf-NPL4 101 PkgicskcqPsaitlqrqkfRmvDhvefesseivdkfldaWRktg 145
                 P gic+kcqPsaitlq q+fRm+Dhvef++++iv++fl++WR +g
  KHJ31116.1 238 PGGICTKCQPSAITLQPQPFRMIDHVEFSKPSIVENFLNFWRISG 282
                 ******************************************997 PP

>> UN_NPL4  Nuclear pore localisation protein NPL4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   4.7e-08   0.00028       5      78 ..       1      78 [.       1      80 [. 0.81

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 4.7e-08
                -EEEEEETTEEEEEEE-TTSBHHHHHHHHHHHS..S-STTT-EEESSTT..CGCCCSSSSSSCCCTCH--TT-EEEEE CS
     UN_NPL4  5 iiiRvqSadGikRieisekstlktllekvaeel..kfsengfslylern..kttelvssssksvkevglkhGdmlyLk 78
                +++R + +dG+ Ri +  + t ++l +k  + l   ++ + + l+       +++l+  s+ +++++gl hGdm++L+
  KHJ31116.1  1 MLLRFRGPDGMVRIVADRDDTFGELEHKLSKVLpeDVDYETLILSNKPAggDNKLLKEISKYKISQIGLGHGDMVFLN 78
                689*****************************9444665555555543322467777778899*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (638 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 4890.19
//
Query:       KHJ31117.1  [L=296]
Description: hypothetical protein EV44_g5943 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       955  (0.0532657); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2358.64
//
Query:       KHJ31118.1  [L=479]
Description: putative misfolded glycoproteins degradation protein yos9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-17   63.1   0.0    9.6e-17   61.8   0.0    1.8  1  PRKCSH    Glucosidase II beta subunit-like protein
  ------ inclusion threshold ------
      0.063   13.0   0.0       0.84    9.3   0.0    2.4  2  PRKCSH_1  Glucosidase II beta subunit-like protein


Domain annotation for each model (and alignments):
>> PRKCSH  Glucosidase II beta subunit-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.8   0.0   1.1e-20   9.6e-17       1      81 []     150     250 ..     150     250 .. 0.89

  Alignments for each domain:
  == domain 1  score: 61.8 bits;  conditional E-value: 1.1e-20
                 X-EEEEEETTEEEEEETTTEEEEE-E..........ETTEE-S--EEEEEE..EEEEEEE-------................---S--EEEEEEEEE- CS
      PRKCSH   1 gkCvsskegwwtYelCygkkvrQfhe..........pekekgksevvLGrfnkeehsewaekneaks...........ystedeekqsnryislkyenG 78 
                 g+C+++++gww+Y++C++ +v+Qfh           p+++++++ +vLG+   +++ + +++n +             ++ e + k+ +ry+++++e+G
  KHJ31118.1 150 GSCLYFISGWWSYSFCFNAEVTQFHHltlqpgkqdsPKRDPNTKPFVLGKA-TSKEGSRDSSNSKLNgltdlhrttqmPRLELNSKGGTRYLVQRMESG 247
                 68***********************************************88.4444444444444448899999************************* PP

                 SB- CS
      PRKCSH  79 tkC 81 
                 t+C
  KHJ31118.1 248 TIC 250
                 *** PP

>> PRKCSH_1  Glucosidase II beta subunit-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0     0.036   3.2e+02      32      63 ..     142     172 ..     115     193 .. 0.78
   2 ?    9.3   0.0   9.3e-05      0.84      89     133 ..     254     299 ..     216     329 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.036
                 X.XX-TTTTT-EEEEEETTEEEEEETTSEEEE CS
    PRKCSH_1  32 ldDiyRalegrevkekigdYeYkvvllesvvq 63 
                 + ++++ l+g ++   +g + Y +++ + v+q
  KHJ31118.1 142 W-ELLQGLDGSCLYFISGWWSYSFCFNAEVTQ 172
                 4.57899999***999**************99 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 9.3e-05
                 TSSC-EEEEEEEE-SS..-EEEEEEEEETTEEEEEEEEGGG--XXXX CS
    PRKCSH_1  89 nGPvRsaiveveCGde..nelvsvseaekCeYllkvkspaaCsnvll 133
                 n P+R   ++++C  +  +++  + e   C Yl++v +p  Cs+v +
  KHJ31118.1 254 NKPRR-IEIQFHCNPSmtDRIGYIKEVTTCSYLMVVYTPRLCSEVIF 299
                 56655.456888876422789999******************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       608  (0.0339115); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3541.81
//
Query:       KHJ31119.1  [L=234]
Description: putative ubiquitin-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0025   18.5   0.0     0.0046   17.6   0.0    1.4  1  YukD          WXG100 protein secretion system (Wss), protein 
     0.0027   17.4   0.0     0.0049   16.6   0.0    1.4  1  ubiquitin     Ubiquitin family
  ------ inclusion threshold ------
      0.064   12.7   0.0      0.097   12.1   0.0    1.3  1  Telomere_res  Telomere resolvase
       0.71    8.4   8.8       0.85    8.1   8.8    1.0  1  Macoilin      Macoilin family


Domain annotation for each model (and alignments):
>> YukD  WXG100 protein secretion system (Wss), protein YukD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0     1e-06    0.0046      42      74 ..     194     226 ..     176     228 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 1e-06
                 ---TT-EEEEGGGEEEETTSBCGGGT--TT-EE CS
        YukD  42 grpggwsLarvggapLsgdrtLaeagVrDGdlL 74 
                  +p +  L+r g++p++ + tL+++gV +G  L
  KHJ31119.1 194 RQPHEIMLKRQGERPFKNQLTLEDYGVSNGVQL 226
                 5677799***********************877 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.1e-06    0.0049      17      67 ..     177     228 ..     168     232 .. 0.90

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.1e-06
                 TTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE.-TTSBHGGHTTSTTEEEEE CS
   ubiquitin  17 esdtveelKekiaekegipaeqqrLiysGkvL.edertleeygiqdgstlhl 67 
                  sd+++ +K+++a++ g +++++ L  +G++  ++++tle+yg+ +g +l l
  KHJ31119.1 177 ASDSILLFKAQVAARIGRQPHEIMLKRQGERPfKNQLTLEDYGVSNGVQLDL 228
                 689**************************7655**************99877 PP

>> Telomere_res  Telomere resolvase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.2e-05     0.097     100     140 ..     171     211 ..     148     224 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.2e-05
                   HHHHHTT-SSHHHHHHHHHHHH---HHHHHHT-EEEEEEET CS
  Telomere_res 100 ialellkSrdirlkviglllltGRRheEvlkkgkfdkadkt 140
                    a  +l+S++i+l  + +++ +GR + E++ k + + ++k+
    KHJ31119.1 171 AAIPCLASDSILLFKAQVAARIGRQPHEIMLKRQGERPFKN 211
                   57789*************************99887777665 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   8.8   0.00019      0.85     243     401 ..      14     176 ..       2     221 .. 0.37

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00019
    Macoilin 243 kkdsslklpeleyrekkksakssrsdskkkhehnesvdsklqekeymenkskskrlsksessgsesellveesvkskssssssssnknskkasagsags 341
                   d++++  +l++r +++ ++++r          ++ ++  +  ++++++ +++r + ++s+++ + l +    +s++  s  s+ ++sk+a  g+++ 
  KHJ31119.1  14 A-DKEENRRDLKHRRSRSPSNEKRP---------RRNHNVSHGFRWKDKQQNERRDYIDTSESNRKRLERGYRDRSQTRRSRDSEIQTSKSA-VGGIED 101
                 2.22233333333333222222211.........2222222333333444444444444444444444444444444433333333333333.334444 PP

    Macoilin 342 snssskkhsessksvtsssssknskkq...klpaGkssaalkdaaen............slpnnqlskkdalvrL 401
                   + ++k+  ss s+  +s +k+++ +   + p+G+s +++ +a               +  n++l+++ a+  L
  KHJ31119.1 102 KYNVANKFGPSSTSTRGGSRRKQDNYEkedESPSGQSLNSTAKALATtttandtepmivVYVNDRLGTRAAIPCL 176
                 445555555555555554433333322011344444444333333321111122222214444444555553333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       969  (0.0540465); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1619.00
//
Query:       KHJ31120.1  [L=74]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.072   14.1   0.1      0.085   13.8   0.1    1.1  1  DUF4834   Domain of unknown function (DUF4834)


Domain annotation for each model (and alignments):
>> DUF4834  Domain of unknown function (DUF4834)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   4.8e-06     0.085       8      67 ..       5      65 ..       1      73 [. 0.50

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 4.8e-06
     DUF4834  8 lifiiailviglsilsvilrtvfglgsrkkss..ksaqkqfgnstnsnqqksqsrsetkeeg 67
                +i+ ++ ++ +++i ++++r+v  +gs+ ++   + a++++g+++ sn++ s++++++++++
  KHJ31120.1  5 TILAFFTVFQVIAIHGAVIRAVGDKGSNIPAFriD-AASRGGSNRASNRDGSNRSPQQTDQT 65
                45556677788899999*****4455555554432.23333333333333333333333222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       365  (0.0203581); expected 358.6 (0.02)
Passed bias filter:                      244  (0.0136092); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:01.66
# Mc/sec: 135.41
//
Query:       KHJ31121.1  [L=634]
Description: putative pseudouridylate synthase 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-34  118.6   0.0    2.1e-33  115.0   0.0    2.4  2  PseudoU_synth_1  tRNA pseudouridine synthase


Domain annotation for each model (and alignments):
>> PseudoU_synth_1  tRNA pseudouridine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.044   7.9e+02       5      68 ..     109     181 ..     107     222 .. 0.67
   2 !  115.0   0.0   1.2e-37   2.1e-33       1     108 []     353     485 ..     353     485 .. 0.98

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.044
  PseudoU_synth_1   5 lvGthdfgsfckqkqekkntvrtileaaieevsgeekell............vvtvkgsgFldhqVRamvgvl.fav 68 
                      + G++++g f + +++++++  t+ e  ++ +++ +  l+              + +  g++d++V a ++v+ + v
       KHJ31121.1 109 YFGKRYSG-F-EYHAKTPTSLPTVEEELWKAFTKAK--LIfphpnqavgdwgGCEYSKCGRTDSGVSAFGQVIcLRV 181
                      56666666.6.4555555566666666666555543..224466666666667777778999999999999994444 PP

  == domain 2  score: 115.0 bits;  conditional E-value: 1.2e-37
  PseudoU_synth_1   1 AakelvGthdfgsfckqkqek..kntvrtileaaieevsgeekell......................vvtvkgsgFldhqVRamvgvlfavgq 70 
                      Aak ++G hdf++fck +++k  +++vr+i++a+i+ev++++++l                        + ++gs+Fl+hqVR+m+++lf++gq
       KHJ31121.1 353 AAKLFEGLHDFRNFCKVDASKqlESFVRRIYYAEIKEVPDTTSTLEilnssdfqlpnhslnsgspkvyAFILHGSAFLWHQVRHMIAILFLIGQ 446
                      89***************************************98888************************************************ PP

  PseudoU_synth_1  71 gklspedvkellnakk.rkkiavetapavglvlfhvrYd 108
                      g ++p+++++ll+++k ++++++++a +++lvl+++ ++
       KHJ31121.1 447 GLEEPSIITKLLDVTKnPRRPMYQMAAETPLVLWDCVFP 485
                      ****************9999****************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (634 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       703  (0.0392102); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4339.19
//
Query:       KHJ31122.1  [L=401]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
        4.8    7.4   7.6         15    5.8   3.7    2.6  2  Zn-ribbon_8  Zinc ribbon domain


Domain annotation for each model (and alignments):
>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1      0.01   1.8e+02      17      34 ..     293     311 ..     286     317 .. 0.71
   2 ?    5.8   3.7   0.00085        15       8      35 ..     324     349 ..     321     352 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.01
  Zn-ribbon_8  17 vlqsisdaplta.CPeCgs 34 
                  +++++++   ++ C++C++
   KHJ31122.1 293 AMRTFKKQQSPEfCKRCNG 311
                  6777776667888****97 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.00085
  Zn-ribbon_8   8 CeeCghefe..vlqsisdapltaCPeCgse 35 
                  C +Cg++    +l+ ++   +t C++Cg++
   KHJ31122.1 324 CGNCGSTIHseALC-MT---QTRCKNCGGP 349
                  9****998854555.55...888*****95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       836  (0.0466284); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 3011.19
//
Query:       KHJ31123.1  [L=452]
Description: hypothetical protein EV44_g5257 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       890  (0.0496402); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3370.46
//
Query:       KHJ31124.1  [L=1030]
Description: putative serologically defined colon cancer antigen 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.1e-35  119.3   0.0    6.1e-35  119.3   0.0    2.7  3  NFACT-C    NFACT protein C-terminal domain
    9.6e-29  100.2   0.1    2.4e-28   98.9   0.1    1.8  1  NFACT-R_1  NFACT protein RNA binding domain
    9.2e-28   97.2  12.1    9.2e-28   97.2  12.1    2.7  2  FbpA       Fibronectin-binding protein A N-terminus (FbpA)


Domain annotation for each model (and alignments):
>> NFACT-C  NFACT protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1         2   1.2e+04      66      89 ..     328     351 ..     316     363 .. 0.62
   2 ?   -3.2   2.5       1.3   7.8e+03      57      93 ..     822     886 ..     808     897 .. 0.48
   3 !  119.3   0.0     1e-38   6.1e-35       3     105 ..     904    1009 ..     902    1010 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 2
     NFACT-C  66 kkvdekeedkeklwprekelikal 89 
                 +k +++ e++e +++r+ e i++ 
  KHJ31124.1 328 QKSESRLEERELIAKRKIESIRKE 351
                 555556666777777777777654 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.3
     NFACT-C  57 ilekflk............................kkkkvdekeedkeklwprekelikalkeee 93 
                 i +k+                              k+++++e + +kek +  +++++k++ e e
  KHJ31124.1 822 IATKYKDqdledriaaqkvigaisgqqkvlaqataKATRESELQIQKEKKKFLQQKTMKQIAEDE 886
                 44444444555555555555555555544444332222233333334555555555666665544 PP

  == domain 3  score: 119.3 bits;  conditional E-value: 1e-38
     NFACT-C    3 eelslldsLvgtplpeDeileaipvcAPyaaLqkykYkvKlqPGsvKkGkavkeilekflk...kkkkvdekeedkeklwprekelikalkeeelvn 96  
                  e+l+l+d+L g+p+++D+++eaipvcAP +a++ ykYk+K+qPGsvK+Gk +keil+++l+   kk k+d+k+ed+e +wpre+el++++k ee++ 
  KHJ31124.1  904 ENLKLIDTLFGRPMKGDNLIEAIPVCAPLSAMKDYKYKIKIQPGSVKRGKIAKEILSRWLAdgeKKGKIDTKSEDTELIWPREMELLRGWKFEEITG 1000
                  78999********************************************************997779****************************** PP

     NFACT-C   97 tlpvgkvkv 105 
                  +lpv+k+++
  KHJ31124.1 1001 VLPVSKMRL 1009
                  ******997 PP

>> NFACT-R_1  NFACT protein RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.9   0.1   4.1e-32   2.4e-28       1     109 []     546     659 ..     546     659 .. 0.97

  Alignments for each domain:
  == domain 1  score: 98.9 bits;  conditional E-value: 4.1e-32
   NFACT-R_1   1 kvfwFkssdgylvimGkDkqeneelikkyleesdvwfhvdkessahvylrlsegele.eipeelleeaaqlakanSia.gnklssvdvvyvpasnlskt 97 
                 k+fwF+ssd++lv++GkD ++ne+l+kk+l+++d+ + +d e++a+v++++++++++  i++++l+ea+ la++ S+a ++k   + +++v+a+++sk+
  KHJ31124.1 546 KFFWFISSDRHLVLAGKDTMQNEILYKKHLKKGDICVSADLEGAAFVIIKKKANQIDtLISPSTLSEAGVLAVSCSSAwDSKA-IMPAWWVNAEQVSKS 643
                 8*************************************************999998889*******************99998.*************** PP

   NFACT-R_1  98 ap....ldtGsvgfkg 109
                 a+    l+tG + f+g
  KHJ31124.1 644 AStgnfLSTGCFHFRG 659
                 **9*********9986 PP

>> FbpA  Fibronectin-binding protein A N-terminus (FbpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.2  12.1   1.5e-31   9.2e-28       2     421 ..       7     529 ..       6     542 .. 0.78
   2 ?   -2.6   6.2      0.29   1.7e+03     295     341 ..     865     912 ..     851     915 .. 0.68

  Alignments for each domain:
  == domain 1  score: 97.2 bits;  conditional E-value: 1.5e-31
                 HHHHHHHHHHHHHHHTTXEEEEEEEEETTEEEEEEEETTEEEE.EEEEXXTTTXEEEEXXXXXXXXSSXXHHHHHHHHHHTTXEEEEEEEXTTSSEEEE CS
        FbpA   2 glvlaavvaELqkellggridkiyqpekdelvltlranrgrhk.LllsahpsyarihltekpkenpkeppnFcmlLRkyLkgarivsieqlgfdRivel 99 
                 +l+++ + +EL ++l++ r+++iy   ++   +++ + + + + ++++    + r hlte++++  ++p+ F++ LRk+Lk  r++s++q+g dR++e+
  KHJ31124.1   7 SLDVKIIAHELCNSLVTLRLQNIYDLSSRIFLIKFAKPDIK-WnVVIET---GFRCHLTEYSRATAASPSIFVQGLRKRLKTRRVTSVSQIGTDRVLEF 101
                 688999***********************999999977777.55*****...*********************************************** PP

                 EEEEEXTTSXEEEEEEEEEXXGGGXEEEEEETTTEEEEESSXBXXXSSXSXXBSTTXBXXXSXXXS..XBXTTSXXH.H.HHHHHHHH........... CS
        FbpA 100 siekrdElgdeeeytLivEimgrhSNiiLvdeenkIidaikhvspkqsrvReilpgekYelPpsqd..klnPleaeele.efkellsk........... 184
                 ++++         y+L++E ++  +NiiL+d+e +I+++ + v +++ +  e+  g kY l   q+  +  Pl+ e l+ ++++ ++k           
  KHJ31124.1 102 QFSDG-------LYKLFIEFFAS-GNIILTDKELNILTLQRVVPESEGQ-EELRVGLKYSLDNRQNygGTPPLTREILQnALQKGIDKygndmknpkns 191
                 *****.......9**********.**************99999888555.9**********99986448999999999988888877777777777766 PP

                 ..S.XXXHHHHHHHBTTXXHHHHHHHHTTXSSSH....................HHHHHHHHTXXX..........................XXEE... CS
        FbpA 185 ..kekdlvkaLvkafqGlspllaeelleragldket.sakelsee....dlerlyealqelleele......................eekfepqlvlk 254
                   +   l+kaL+ +++ l p+l+  +l+ +++d +  +++ l++e    +l   ++  q+l+ee+                        ++ + +l+++
  KHJ31124.1 192 kkNHSYLRKALAVSITELPPTLVDHALKVTEFDGTLlPIDILQDEcllnQLLFTMKYAQQLVEEIMrpgivkgyiiakkrpeydetalDKNTRKFLIYD 290
                 66667799***********************88775134444444100033444444555555555999999999999877776665544555555444 PP

                 ..XSSSEESSXXTTXX.SSX...XXXSXHHHHHHHHTTTXXX--SHH..HHHHHHHHH.HHHHHHHHHHHHHHHHHHHHCCGGH.....HHHHCCHH-- CS
        FbpA 255 eekpeefsvvplkslselek...esfdslsealdeyYakkaerdrve..qkrsdlekr.veneleklekklkklekelekaeka.....enyrligell 342
                      +f +++l +l++  +    + +  ++++d++++  + ++     ++r+ ++kr +e++++ + k+l+ l+     +e +     +n+++i+e +
  KHJ31124.1 291 -----DFNPFRLAQLENDPSvvfLEIEGYNRTVDNFFSSIEGQKSESrlEERELIAKRkIESIRKEQAKRLEGLQHVQTINERKagaiqANIERIQEAM 384
                 .....566666555554444344788999********9765444433224566666666899999999999988754333333356899********** PP

                 ---------------------.--................................................................----------- CS
        FbpA 343 taylyaikkgmsevelenyydege................................................................evtIpLdprks 377
                  a+++ i++gm++ve+ + ++ ++                                                                 +++ ++   s
  KHJ31124.1 385 DAINSLIAQGMDWVEIAKLIEVEQrmkspialtiklplklhenmvtltldeevsdvenslasetdtefsdsededsnnpetspgkadkRLEVDINLGIS 483
                 ********************9744699****************99999999999999999999999999999999999999999998855666666668 PP

                 ----HHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHH CS
        FbpA 378 psenAqkyfkkykKlkraveavee..qieetkeeleylesveaale 421
                 p  nA  yf++ + +  ++e+ +e   i+  ++e +  e++ ++l+
  KHJ31124.1 484 PWANARLYFDERRTAIYKEEKTKEssVIAVKNQEAKIKENLYNSLK 529
                 8899999998877665555555542246666666666666666666 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.29
                 -SHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHCCGGHHHHHCCHH- CS
        FbpA 295 drveqkrsdlekr.veneleklekklkklekelekaekaenyrligel 341
                 +  ++k++ l+++ ++++ e ++ +++ l++e++++++ en++li+ l
  KHJ31124.1 865 QIQKEKKKFLQQKtMKQIAEDEKLRQQMLQREIDENSDGENLKLIDTL 912
                 333345555555546666666666777789999999999999998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1030 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1829  (0.102013); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.83u 0.28s 00:00:01.10 Elapsed: 00:00:00.47
# Mc/sec: 6588.33
//
Query:       KHJ31125.1  [L=254]
Description: hypothetical protein EV44_g2294 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-09   37.4   0.0    6.1e-09   35.9   0.0    1.6  1  PPP4R2    PPP4R2


Domain annotation for each model (and alignments):
>> PPP4R2  PPP4R2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.0   3.4e-13   6.1e-09      87     202 ..     104     222 ..      91     236 .. 0.60

  Alignments for each domain:
  == domain 1  score: 35.9 bits;  conditional E-value: 3.4e-13
      PPP4R2  87 dsf.naaPFTiqRicELltdPkkyYkeldKFvrAleKnilVvStiepggkr....eseaeeeksnsesseniingvlseelnse...keedkansssqe 177
                 + f +a P TiqR+ ELl  P+ +Y+ l+ ++ Al++ + V+St +         +s+     ++s s+ ++i+g+    ++ +    +++   + +++
  KHJ31125.1 104 KYFsKAPPHTIQRLAELLLFPRCNYRSLSSYLLALDRVVHVTSTSTAFPLLlispDSS----ANKSLSNGDTIDGADLHPVSRNftaPNNPLIHGVGSD 198
                 33413458************************************94444335444333....3344444445555333333333333222233333333 PP

      PPP4R2 178 .dsedvslvsipwvdekteselspfi 202
                      + l+ ipw++++   ++sp +
  KHJ31125.1 199 eALGGALLTPIPWLKKSR--SSSPLE 222
                 155667788888866555..444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       371  (0.0206927); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1855.69
//
Query:       KHJ31126.1  [L=926]
Description: putative amp deaminase 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
     1e-119  399.7   0.1   1.4e-119  399.2   0.1    1.2  1  A_deaminase  Adenosine/AMP deaminase


Domain annotation for each model (and alignments):
>> A_deaminase  Adenosine/AMP deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  399.2   0.1    8e-124  1.4e-119       1     327 [.     475     880 ..     475     881 .. 1.00

  Alignments for each domain:
  == domain 1  score: 399.2 bits;  conditional E-value: 8e-124
                  TS-EEEEEEECCCSS-HHHHHHHHHHHCHT..SS-SCCCCCCCCHCHCCHHHHCCHCCCHHCCCHHHT.............................. CS
  A_deaminase   1 nlpKvdlHvHldgclnpktllrlakkkgikeldekvveedeklltlqekfesLkeflydlsvdvlvlh.............................. 68 
                  n++Kvd+H+H+++c+n+k+llr++k+k++k++de+v+++d+k+ltl+e+f+s+++++ydls+d+l++h                              
   KHJ31126.1 475 NVRKVDTHIHHSACMNQKHLLRFIKSKMKKCPDEVVMFRDGKYLTLAEVFQSINLTAYDLSIDTLDMHahtdsfhrfdkfnlkynpigesrlrtiflk 572
                  89************************************************************************************************ PP

                  .............................................................CCCCCCHHHHHHCCCCCHCTTCCCCCCCCSHHHHHHH CS
  A_deaminase  69 .............................................................wlievvrllavekakdlakdfvkylevifsPlfeata 105
                                                                               wli+++rl++v+k+++l+++f++ + +if+Plfe+t+
   KHJ31126.1 573 tdnfikgrylaeitkevisdlesskyqmaewrisiygrtidewdkladwvvdnkifshnirWLIQIPRLFDVYKSRGLMNSFEELIINIFQPLFEVTK 670
                  ************************************************************************************************** PP

                  -GC.STCCHHHHCCCCCCCCCCHCCT-EEEEEECCETTTCCGHCCCHHHHHHCCCCCCCCCCCCC-TTSTTGGGHHHHHCCCCHTT-EEEEEESSSS- CS
  A_deaminase 106 gpq.lpelevvlkvvdgfdsvedeskvkerlilvksrkpeewseeinelasyyrdytvvnldllndekiepaslflklraeagkstllltpHaGEagg 202
                  +p  +p+l+++lk+v g+dsv+desk  er++++k+++p+ w++++n+++sy+ +y ++n+++ln             r+++g++t++l+pH+GEag+
   KHJ31126.1 671 DPSsHPKLHIFLKRVVGIDSVDDESK-AERRLHKKFPVPKVWDSAQNPPYSYWIYYLFSNMASLN-----------IFRKKRGFNTFVLRPHSGEAGD 756
                  **************************.9*************************************...........99******************** PP

                  CHHHHHHHHCS--SCECE-GGGGGSHHHHHHHHHCT-EEEE-HHHHCCCSST-TTTT-CHHHHHHTT-EEEE--BSCCCCT-S...HHHHHHHHHHHH CS
  A_deaminase 203 lehvveAllllkaerigHGvrlrkdpvLqyllalaqiplevcPlSNvalgafleyaenPlkeflerglnvslntDDPlqfgtt...LieeYaiaaqvf 297
                  ++h+++A l   +++i+HG++lrk+p+Lqy ++l+qi+++++PlSN+al  fl+y++nP+ ++++rglnvsl+tDDPlqf +t   LieeY++aaq++
   KHJ31126.1 757 TDHLAAAALC--CHSISHGLLLRKVPFLQYIFYLEQIGVAMSPLSNNAL--FLTYERNPFLQYFKRGLNVSLSTDDPLQFAFTkepLIEEYSVAAQIY 850
                  **********..*************************************..*********************************************** PP

                  T--HHHHHHHHHHHHHCSSS-HHHHHHHCH CS
  A_deaminase 298 klseedlaelarNsvkqsflsadekkklld 327
                  kl+++d++ela+Nsvkqs+ ++  k+++l+
   KHJ31126.1 851 KLTAVDMCELAKNSVKQSGYEHIIKQHWLG 880
                  ****************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (926 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       554  (0.0308997); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.42
# Mc/sec: 6605.44
//
Query:       KHJ31127.1  [L=454]
Description: putative repressible acid phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-29  101.5   0.0    7.7e-29  101.2   0.0    1.1  1  His_Phos_2  Histidine phosphatase superfamily (branch 2)
  ------ inclusion threshold ------
       0.18   11.5   0.1        1.1    8.9   0.0    1.9  2  His_Phos_1  Histidine phosphatase superfamily (branch 1)


Domain annotation for each model (and alignments):
>> His_Phos_2  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.2   0.0   8.5e-33   7.7e-29       6     383 .]      58     396 ..      53     396 .. 0.88

  Alignments for each domain:
  == domain 1  score: 101.2 bits;  conditional E-value: 8.5e-33
                 EEEEE--SBB-SHHHHHHHHHHHHHHHH.........HHCHHTGCCGGGGT.........--SSSTTS.B-HHHHHHHHHHHHHHHHHCHTCCHTTSS- CS
  His_Phos_2   6 vvviRHGdRtPkqkvkksvtspiflsllkkhkeKlkqlktalekkghfpgtyrkveveklqlilkwggelthaGrkqaeelGrqfrqrYplgLlrlhlt 104
                   +iRHG+          + +p++++l k h      ++ ++  +++f+ t++        l  + ++ l+++G+ qa + G  + qrY   L  +   
  KHJ31127.1  58 AYLIRHGAIHSNDYEFEHFIEPLLIKLAKTH------VNWSTIPNLAFLSTWKN-----PILSEEQEW-LSRSGKLQAMAAGVEVAQRYF-YLRTP--- 140
                 6688888877776666777788888888766......89999999999999943.....455555555.********************8.66555... PP

                 -TTEEEEEESSHHHHHHHHHHHHHHCHCCC---S-TTSTTGGG-TTTTCCCEEEHHHHCCCCHHCTTSHHTCHHHCHHHTGGHCHHHHCHCCCCCHHHH CS
  His_Phos_2 105 ykdlkirassegRviaSAaafakGllglegeltdllskdkdllddsnaakdlldeakkklkelltegaeacpafewpikvakrvdelvkylkedmdeni 203
                      i+++s++R++++A+ f kGl   +g               + + ++ +de kk +++ lt+++ +cpa+ +      ++ +l+ ++ +++++++
  KHJ31127.1 141 ---KRIWSASSKRTVKTAEFFRKGLR-SHG---------------NGVSVVKIDEGKKMGANTLTPYE-SCPAYSK-----ATGSDLSTEFLKIYTKPV 214
                 ...47*********************.555...............5899999***9988888887666.*****99.....999*************** PP

                 HHHCHHHCTTEEEE-HHHHHHHHHHHHHHHHHHCT-TTGGGCTH..HCHHHHHHHHHHHHHHHC........TTTCCCCHHHHHHHHHHHHHHHCTSSS CS
  His_Phos_2 204 akrleqlcpgesnllakerwdklercfyeknkfdiskicdlydemkydalhnrylkdleelyklakvipqEygigpeeklkiGllllnpllkkilndlq 302
                 + r+++l pg  n++  ++++    c ye+  ++ s++cdl     +++l ++y++d +++y+         g+g+++  ++G +++n+ ++ + +d +
  KHJ31127.1 215 VTRFNALAPGF-NFTSSDIYAISLICGYETVLRGSSPFCDLSVLSINEWLGFEYTNDIRYFYNS--------GYGSPISGAMGFPWVNATFDALMSDQN 304
                 **********9.*****************************88888******************........*************************** PP

                 EECCSCCCECS-SEEEEEE-HHHHHHHHHHCTTTTTBTTB.SSS............TTT..HCCCS-CT-EEEEEEEEETCTT.T..EEEEEEEC CS
  His_Phos_2 303 rtreeatperhvrlrlyfthdshiysllnaLglpeelagedslaa...........ldrlsaspelpymsqivfelyedssek.k..fyvrllls 383
                 +++   ++ +++ l+++fth      +l a+gl++++a   s++a           ++ +++s++lp+m+ + +e+ e++s + +  +y r+ll+
  KHJ31127.1 305 KQS---DKVEDQDLYISFTHRHLPPMVLVAMGLFNNSAYSGSNKAqqtmplhtinhQRVWKSSQILPFMTDVGLEKLECDSHDyDkgTYYRVLLN 396
                 *99...799***********9888999********99988777778899******************************6665423688888876 PP

>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1     0.069   6.2e+02       2      13 ..      59      70 ..      58      75 .. 0.86
   2 ?    8.9   0.0   0.00012       1.1      25      67 ..     115     162 ..     105     176 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.069
                EEEE---BTTB- CS
  His_Phos_1  2 yLvRHGetewna 13
                yL+RHG  + n 
  KHJ31127.1 59 YLIRHGAIHSND 70
                9*****998875 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00012
                 B-HHHHHHHHHHHHHHTT.....S---EEEE-SSHHHHHHHHHHHHCT CS
  His_Phos_1  25 LteeGreqAealaerlag.....epidaiysSplkRarqTaeliaeal 67 
                 L+  G+ qA a++  +a+     + +++i+s   kR+++Tae + + l
  KHJ31127.1 115 LSRSGKLQAMAAGVEVAQryfylRTPKRIWSASSKRTVKTAEFFRKGL 162
                 8899999**99999988877667788999*************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (454 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       326  (0.0181828); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 3179.40
//
Query:       KHJ31128.1  [L=361]
Description: putative swr1-complex protein 5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-22   79.2   0.7      5e-22   77.8   0.7    1.7  1  BCNT      Bucentaur or craniofacial development


Domain annotation for each model (and alignments):
>> BCNT  Bucentaur or craniofacial development
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   0.7   2.8e-26     5e-22       9      73 ..     293     357 ..     289     358 .. 0.95

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 2.8e-26
        BCNT   9 aeitakkkKlstleKSklDWeaykdkegikeeLeahnkgkegYlerqdFLqRvddrkeekereaR 73 
                 +++ ++ kKl+t+eKS +DW+ ++dkegi +eLea++k+k++Y  +q+FL+Rv+++kee+ r+aR
  KHJ31128.1 293 SDLMKEGKKLNTVEKSIIDWAGFVDKEGIADELEAASKSKHSYKTHQEFLARVEQKKEEESRRAR 357
                 5667899*********************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       989  (0.055162); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2769.62
//
Query:       KHJ31129.1  [L=590]
Description: putative secreted effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (590 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 4204.46
//
Query:       KHJ31130.1  [L=357]
Description: putative mitogen-activated protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      6e-66  222.5   0.0    7.8e-66  222.1   0.0    1.1  1  Pkinase        Protein kinase domain
      2e-31  109.2   0.0    2.5e-31  108.9   0.0    1.1  1  Pkinase_Tyr    Protein tyrosine kinase
    6.4e-06   25.4   0.1    8.8e-06   24.9   0.1    1.2  1  Haspin_kinase  Haspin like kinase domain
    9.6e-05   21.8   0.1     0.0003   20.2   0.1    1.7  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family
    0.00066   19.7   0.0     0.0011   19.0   0.0    1.4  1  APH            Phosphotransferase enzyme family
     0.0046   16.3   0.0       0.12   11.7   0.0    2.2  2  Kinase-like    Kinase-like
  ------ inclusion threshold ------
       0.01   15.5   0.0      0.017   14.7   0.0    1.4  1  FTA2           Kinetochore Sim4 complex subunit FTA2
      0.033   13.8   0.0      0.055   13.1   0.0    1.4  1  RIO1           RIO1 family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.1   0.0   3.5e-69   7.8e-66       1     264 []      20     299 ..      20     299 .. 0.88

  Alignments for each domain:
  == domain 1  score: 222.1 bits;  conditional E-value: 3.5e-69
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE.SSEEEEEEE--TTEBHHHHHHHHSS--HH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee.kdelylvleyveggeladllerkgslsee 98 
                 y++l+ +G G+fG V +a+++ tg+ vAvKki k   +    k++ rE+k+lk+lkh+ni+ l ++f +  +++y+v+e++ ++ l++ll  ++ l+++
  KHJ31130.1  20 YSDLQPVGMGAFGLVCSAKDNLTGQNVAVKKIMKPFSTPVLSKRTYRELKLLKHLKHENIISLSDIFISpLEDIYFVTELLGTD-LHRLLA-SRPLQKQ 116
                 678999************************************************************9985689********966.999996.689**** PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHSS-S CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvl.keneyskkvDvWslGvilyelltgkpp 196
                  ++ +++qil+gl+y+Hs+g++HrDlKp+NiL++e+ +lKi+DFGla+  + +  +t +v t++Y+APE++ + ++y+ +vD+Ws+G+i++e+l +kp+
  KHJ31130.1 117 FIQYFLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDPQ--MTGYVSTRYYRAPEIMlTWQKYDVEVDIWSAGCIFAEMLENKPL 213
                 ************************************************98885..7**************9899************************* PP

                 TTTSSHHHHHHHHHHTHHHHHHHCT....SHH...HHHTTS.....................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 197 fsgekgkekvekeldqlekilkilg....etkeklpeasei.....................seeakdllkkllkkdpkkRltaeellqhpyl 264
                 f+g+++       ++q+  i+++lg    ++  +++ ++++                     ++ a+dll+++l  dp+kR+ a e+l+h+yl
  KHJ31130.1 214 FPGKDH-------VNQFSIITELLGtppdDVIHTIASENTLrfvqslpkrerqslknhfknaDPLAIDLLERMLIFDPRKRVKAGEALAHEYL 299
                 **4444.......455455555565544422333333333355666788888899999999999***************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.9   0.0   1.1e-34   2.5e-31       5     200 ..      24     209 ..      21     261 .. 0.86

  Alignments for each domain:
  == domain 1  score: 108.9 bits;  conditional E-value: 1.1e-34
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEE.STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE.SSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtl.keeateeekeelleeakimkklkhpnivkllgvct.keepllivteyvkgGdLlkfLrkkekekl 100
                  + +G GafG V++++ +     + ++VavK++ k  +t   +++ ++e+k++k+lkh+ni++l  + +   e +++vte++   dL+  L ++   +l
   KHJ31130.1  24 QPVGMGAFGLVCSAKDN----LTGQNVAVKKImKPFSTPVLSKRTYRELKLLKHLKHENIISLSDIFIsPLEDIYFVTELLG-TDLHRLLASR---PL 113
                  568**********9988....88999***9874777788889************************9977788******985.69*****998...99 PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHH.SEEEHHHHHHHHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslke.kkftsksDvWsfGvllwE 197
                  + + +  f +q+ +G++y++s  +vHrdl   N+L++en   ki+DfGLar    d ++   ++      + apE++ + +k+ ++ D+Ws G +  E
   KHJ31130.1 114 QKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQ--DPQM---TGYVSTRYYRAPEIMLTwQKYDVEVDIWSAGCIFAE 206
                  999999*********************************************77..3333...3333444567***9766267**************** PP

                  HHT CS
  Pkinase_Tyr 198 ift 200
                  +++
   KHJ31130.1 207 MLE 209
                  998 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.1   3.9e-09   8.8e-06     156     260 ..      61     169 ..      43     195 .. 0.73

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 3.9e-09
  Haspin_kinase 156 vkgtypglllllqdkvlkek....pdfyseqqlflvlllkdkGtdLeevklkswkq...alsifwqivkiLyvaEtkfeFEHRdLhldniLvdknl 244
                     k ty +l ll   ++++e+     d++ +    ++ + +  GtdL ++  +   q   ++  ++qi+  L+ + +     HRdL+  niLv++n 
     KHJ31130.1  61 SKRTYRELKLLK--HLKHENiislSDIFISPLEDIYFVTELLGTDLHRLLASRPLQkqfIQYFLYQILRGLKYVHS-AGVVHRDLKPSNILVNENC 153
                    566666665443..23333333445888888888999999999999999554433301144556778777777765.4788*************** PP

  Haspin_kinase 245 nvtlidlklsRlesse 260
                       ++d+ l+R+++++
     KHJ31130.1 154 DLKICDFGLARIQDPQ 169
                    ************9544 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.1   1.3e-07    0.0003      42     166 ..      49     160 ..      42     171 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 1.3e-07
         Kdo  42 gklskdlyrfklgrtravrEfrllkrLeeagvavpkpvaagavkvgleyrAlllterlegaqdLedllakwaelaeelkrallkavgrliaklhragvn 140
                 +k++k  ++ ++   r  rE++llk L+++ +  +  ++     +        +te l    dL  lla+ + l+++  +  l ++ r  +  h+agv 
  KHJ31130.1  49 KKIMKP-FSTPVLSKRTYRELKLLKHLKHENIISLSDIFISPLED-----IYFVTELLG--TDLHRLLAS-RPLQKQFIQYFLYQILRGLKYVHSAGVV 138
                 677777.77777788999999999999999999999999876554.....456788775..69******7.77999*********************** PP

         Kdo 141 HadlyaknillqqeeeeeaeiwliDl 166
                 H+dl + nil++++      + + D+
  KHJ31130.1 139 HRDLKPSNILVNENC----DLKICDF 160
                 ***********9986....4444455 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   4.8e-07    0.0011     163     201 ..     132     168 ..      57     170 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 4.8e-07
                 SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEEEC CS
         APH 163 elptvllHgDlhpgNllvdpddgrvtGviDfedaglgpp 201
                   +++++H+Dl+p N+lv+++ +    + Df++a++ +p
  KHJ31130.1 132 VHSAGVVHRDLKPSNILVNENCDL--KICDFGLARIQDP 168
                 45899**************44444..59********999 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.034        76      18      52 ..      24      58 ..      17      79 .. 0.75
   2 !   11.7   0.0   5.2e-05      0.12     147     195 ..     119     166 ..      69     203 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.034
  Kinase-like 18 ellkkgdrsvvfevkdqetgeplavkvfllpseas 52
                 ++++ g +++v  +kd+ tg+++avk  + p   +
   KHJ31130.1 24 QPVGMGAFGLVCSAKDNLTGQNVAVKKIMKPFSTP 58
                 678899999****************9877665443 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 5.2e-05
  Kinase-like 147 lllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvrag 195
                  ++   q++r   + ++ g+vh ++++ n+l +e+  l++ +f+ L r  
   KHJ31130.1 119 QYFLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFG-LARIQ 166
                  445578999999*****************************97.44444 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   7.7e-06     0.017     170     211 ..     114     155 ..      95     164 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 7.7e-06
        FTA2 170 qeelevsqlpkllrdlkklhklgIvvrDlkeenyidgkLvDl 211
                 q+++++  l ++lr lk +h++g+v+rDlk++n++ ++ +Dl
  KHJ31130.1 114 QKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDL 155
                 6778888899***********************986654444 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   2.5e-05     0.055     104     150 ..     115     161 ..      60     172 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2.5e-05
                 HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE--GT CS
        RIO1 104 eeeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviIDvs 150
                 ++ ++  ++++l+ + k ++ ag+vH DL   N+lv+e+ ++ i D++
  KHJ31130.1 115 KQFIQYFLYQILRGL-KYVHSAGVVHRDLKPSNILVNENcDLKICDFG 161
                 556677778888865.5566*******************999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2658.77
//
Query:       KHJ31131.1  [L=337]
Description: putative glycosyltransferase family 4 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-19   69.9   0.0    3.6e-19   69.4   0.0    1.2  1  Glyco_transf_4   Glycosyltransferase Family 4
      7e-16   58.2   0.1    6.5e-14   51.8   0.1    2.3  1  Glycos_transf_1  Glycosyl transferases group 1
    3.6e-06   27.2   0.2     0.0039   17.3   0.0    2.3  2  ALG11_N          ALG11 mannosyltransferase N-terminus
    4.7e-05   23.9   0.0    8.3e-05   23.1   0.0    1.4  1  Glyco_trans_4_4  Glycosyl transferase 4-like domain
      0.003   18.0   0.1      0.015   15.7   0.1    2.1  1  Glyco_trans_1_4  Glycosyl transferases group 1


Domain annotation for each model (and alignments):
>> Glyco_transf_4  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.4   0.0     1e-22   3.6e-19       1     169 [.      13     199 ..      13     200 .. 0.89

  Alignments for each domain:
  == domain 1  score: 69.4 bits;  conditional E-value: 1e-22
  Glyco_transf_4   1 vGGverhvleLaraLarrGheVtvvtpgddgpleeev.......elvvrvprvplpllkrllrslaflrrlrrllkre........kpDvvHahs 80 
                     +GG+er + + a +L+ rGh+V+++t++ d+ +  e+       ++v+    vp  ++ r++++ a lr++  ++  +        kp +  + +
      KHJ31131.1  13 IGGAERLIIDAAVGLQNRGHKVVIFTSRCDPQHCFEEakngtldVRVRGDAIVPVSIFSRFYIICAVLRQVSLIISIYfsselnllKPNIFIVDQ 107
                     7******************************************9888888889999999999988888877666555555666666*****9999 PP

  Glyco_transf_4  81 paalgaallalrrrlgiplVltvHglye...krllkarlkplsrllralerrllrradrviavSeatadelreryg..vppekitVipnGvDle 169
                       a++  l++l+     ++ +++H+++    +++ k+ ++ ++  + +le++ ++ ad + ++S++t++ ++e ++   +++k +Vi++ vD++
      KHJ31131.1 108 LSAGLPWLAYLC--PETKILFYCHFPDLllaQGRNKWWKRIYRMPFDKLEEWSMKFADSIAVNSNFTKKIVCEVFPnlARNKKFEVIYPCVDVT 199
                     888766666666..9************999999999999999999999*************************99998888***********86 PP

>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.8   0.1   1.8e-17   6.5e-14      13     112 ..     213     336 ..     202     337 .] 0.76

  Alignments for each domain:
  == domain 1  score: 51.8 bits;  conditional E-value: 1.8e-17
                      TT-EEEEEESS-TTTTTHHHHHHHHHCCCCCHCSCEEEEEES.........STTHHHHHHHHHHHCTTCGGGEEECCHSSSHHHHHHCESEEEE CS
  Glycos_transf_1  13 ekkkiilsvgrlekeKgvdllikafallkkqlnpnvklviaG........ngeeekelkklaeelelsdnviflgevsredleellknadifvl 98 
                      +kk i+ls++r+e++K++ l+i+a+ +l+k ++  ++lv+aG        n+++ kel +la +l+l+  +i +  +     + + +  di++l
       KHJ31131.1 213 DKKHILLSINRFERKKNIGLAIRAYSRLEKIERTGARLVLAGgyddqlleNVAYHKELVSLANSLGLKSVTIRT-TLT---TIDIPEDIDILFL 302
                      6899*************************99************************************7655432.222...1222233344444 PP

                      EESS....................BSS-HHHHHH CS
  Glycos_transf_1  99 psis....................EgfGivllEA 112
                       si+                    E+fGiv+lEA
       KHJ31131.1 303 LSITetikeillksarlliytpsnEHFGIVPLEA 336
                      444444444444444466666666*********9 PP

>> ALG11_N  ALG11 mannosyltransferase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   1.1e-06    0.0039       3     140 ..       3     131 ..       1     137 [. 0.78
   2 !    8.0   0.1   0.00073       2.6     169     207 ..     140     178 ..     132     180 .. 0.88

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.1e-06
     ALG11_N   3 ivgffHPycnaggGGErVLwaavkalqkekkkvkivvYtgdlevskeeilekvke.rfnieldkkrikfvaLkkrklveaktyprfTLlgqslgsvlla 100
                  + ffHP   + gG Er +  a   lq++   +k+v++t+   +++++ +e++k+ +++++++ ++i  v + +r ++  +  +++ L++       + 
  KHJ31131.1   3 SIVFFHPDL-GIGGAERLIIDAAVGLQNRG--HKVVIFTSR--CDPQHCFEEAKNgTLDVRVRGDAIVPVSIFSRFYIICAVLRQVSLIISI-----YF 91 
                 689****97.56889****99988886665..7899***87..8899999999874899999999999999999877777666666665533.....33 PP

     ALG11_N 101 leallklvpdvfidtmGyaftyplvkllagvkvvaYvHYP 140
                  + l+ l+p++fi     a    l+ l+ ++k++ Y H+P
  KHJ31131.1  92 SSELNLLKPNIFIVDQLSAGLPWLAYLCPETKILFYCHFP 131
                 3456789*****976656665566667799*********9 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00073
     ALG11_N 169 lsllkllYyklfallYslvgsladvvmvnssWTknhiks 207
                  ++ k +Y   f +l ++ +++ad + vns +Tk+ + +
  KHJ31131.1 140 NKWWKRIYRMPFDKLEEWSMKFADSIAVNSNFTKKIVCE 178
                 678999****************************98766 PP

>> Glyco_trans_4_4  Glycosyl transferase 4-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   2.3e-08   8.3e-05       1     145 [.      14     177 ..      14     193 .. 0.65

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 2.3e-08
  Glyco_trans_4_4   1 gGigryvaelaraLaarGheVtvltpapapgapeleedgvrvhrlpvprrp....splad....laalralrrll......rqrrerpdvvhah 80 
                      gG++r + + a +L+ rGh V+++t++ +p+    ee++  +  ++v+       s + +     a lr++  ++      +    +p + ++ 
       KHJ31131.1  14 GGAERLIIDAAVGLQNRGHKVVIFTSRCDPQHC-FEEAKNGTLDVRVRGDAivpvSIFSRfyiiCAVLRQVSLIIsiyfssELNLLKPNIFIVD 106
                      8************************88888844.3333333333333333211111222211113334444222233344444899****9999 PP

  Glyco_trans_4_4  81 sptaglaarlarr.rrgiplvvtlhglllrrg.sgavrrlyral....errllrradavlvvseaeaeelr 145
                      ++ agl+ ++  +  ++i + +++ +lll++g + + +r+yr+     e ++++ ad + v+s++  + ++
       KHJ31131.1 107 QLSAGLPWLAYLCpETKILFYCHFPDLLLAQGrNKWWKRIYRMPfdklEEWSMKFADSIAVNSNFTKKIVC 177
                      976555333333305688888888899999999778788885555555***************99877665 PP

>> Glyco_trans_1_4  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   4.2e-06     0.015       2      90 ..     216     336 ..     215     337 .] 0.70

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 4.2e-06
                      EEEEEES---GG.GTHHHHHHHHHHHH.HH...EEEEEES---..........HHHHHHHTT-.........................T.TEEE CS
  Glyco_trans_1_4   2 pvilfvGrleenvkgvdllleavpllrkkd...vrlvivGdgprp........eeleelaagl.........................eervef 59 
                      +++l + r+ e++k++ l ++a  +l k +   +rlv++G+ +++        +e       l                         + ++ f
       KHJ31131.1 216 HILLSINRF-ERKKNIGLAIRAYSRLEKIErtgARLVLAGGYDDQllenvayhKE-------LvslanslglksvtirttlttidipeDIDILF 301
                      6789999**.667*************9553468*******653322333333333.......24445555668888888888888864334777 PP

                      E---.TH.HHHHHHH-SEEEE.--.---SHHHHHH CS
  Glyco_trans_1_4  60 tGfv.ed.laellaaadvfva.Ps.egfglkllEa 90 
                      +  + e  ++ ll++a++++  Ps e fg++ lEa
       KHJ31131.1 302 LLSItETiKEILLKSARLLIYtPSnEHFGIVPLEA 336
                      77775554555589999998735599999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 2599.42
//
Query:       KHJ31132.1  [L=707]
Description: hypothetical protein EV44_g3066 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (707 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1109  (0.0618551); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.39
# Mc/sec: 5370.92
//
Query:       KHJ31133.1  [L=247]
Description: putative triosephosphate isomerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-89  298.5   0.4    3.6e-89  298.3   0.4    1.0  1  TIM       Triosephosphate isomerase


Domain annotation for each model (and alignments):
>> TIM  Triosephosphate isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  298.3   0.4     2e-93   3.6e-89       2     243 .]       6     243 ..       5     243 .. 0.98

  Alignments for each domain:
  == domain 1  score: 298.3 bits;  conditional E-value: 2e-93
                 EEEEE-TBTS-HHHHHHHHHHHHHHCHGCTSEEEEE--GGGHHHHHHHHTTSSECEEES--BSSSSBS-TT--BHHHHHHTT-SEEEES-HHHHHHST- CS
         TIM   2 liagNwKmnktleeakellkklkaklkeekvevviappflylekvkklleesklklgaqnvsaeksGafTGevsaemlkdlgvkyviiGHsErrqlfkE 100
                 +++gN+Kmn+t +++ke++++lk++  + k evv+app+lyl+ +++ +  s+++++aqnv  +++Ga+TGevs+++l dlg++++i+GHsErr++f+E
  KHJ31133.1   6 FVGGNFKMNGTVASIKEIAQNLKQANLDPKTEVVVAPPSLYLSVARESFP-SNIQIAAQNVFDKSNGAYTGEVSVSQLVDLGISWTILGHSERRTIFNE 103
                 799******************99999999**************9999996.9*********************************************** PP

                 -HHHHHHHHHHHHHTT-EEEEEE---HHHHHTT.HHHHHHHHHHHHTTTS-CCCGGCEEEEE--GGGSSSS----HHHHHHHHHHHHHHHHHHSTHHHH CS
         TIM 101 tdelvakKvkaalksglkpilCvGEtleereagkteevvkeqlkeilkkldeealknvviAYePvWAiGtgktatpeqaqevhaairkelaekvskeva 199
                 +d++va K+kaal+ g+k+i+C+GE+le+re++kt evv++qlk++ +k++  +++n+viAYeP+WAiGtgk+a+peqaqevh air++l+++vs++v+
  KHJ31133.1 104 DDKFVASKTKAALDGGVKVIFCCGESLEQREQEKTIEVVNSQLKALKEKIS--DWSNIVIAYEPIWAIGTGKVASPEQAQEVHLAIREWLKTQVSAKVS 200
                 ********************************************9999996..58******************************************** PP

                 TTSEEEEESS--TTTHHHHHTSTT--EEEESGGGCSHHHHHHHH CS
         TIM 200 ekirilYGGsvnkenakellkqkdidGlLvGgaslkaesFlkii 243
                 e iri+YGGsvn++n+k+l  q+didG+LvGgaslk+  F++ii
  KHJ31133.1 201 EGIRIIYGGSVNENNCKSLSVQSDIDGFLVGGASLKPG-FIDII 243
                 ************************************87.99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       922  (0.0514251); expected 358.6 (0.02)
Passed bias filter:                      730  (0.0407162); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 1912.06
//
Query:       KHJ31134.1  [L=398]
Description: putative arb2 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.16   12.0   1.1       0.32   11.0   1.1    1.5  1  SecE      SecE/Sec61-gamma subunits of protein translocation 


Domain annotation for each model (and alignments):
>> SecE  SecE/Sec61-gamma subunits of protein translocation complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.1   1.8e-05      0.32      18      42 ..     279     303 ..     278     304 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 1.8e-05
                 HCCHHHHHHHHHHHHHHHHHHHHHH CS
        SecE  18 trkEllkttvvVlvfvvimglflfl 42 
                 t kE+ ++t+vV +f +i+ l++++
  KHJ31134.1 279 TTKEFKNWTIVVGIFNTILILYIYI 303
                 679********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3010.25
//
Query:       KHJ31135.1  [L=463]
Description: putative ph-response regulator protein palc [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.6e-09   35.9   0.0    5.3e-09   35.4   0.0    1.2  1  BRO1         BRO1-like domain
  ------ inclusion threshold ------
       0.17   11.7   0.0       0.37   10.6   0.0    1.5  1  HPTransfase  Histidine phosphotransferase C-terminal domain


Domain annotation for each model (and alignments):
>> BRO1  BRO1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   0.0   5.9e-13   5.3e-09      91     332 ..      98     396 ..      66     428 .. 0.81

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 5.9e-13
                 XXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...............XXX.XXXXXXXXXXXXXXXXXXXX...XXXXXXX... CS
        BRO1  91 FtWydaf.......ssskkvtqsslafEkasvLFniaalysqlaasqnr.............stdeglkrackyfqqAAgvfqylk...enflhaptee 166
                  +W +++       ++ +k++ +sl++E   +L  +a +++ la+ + +             + +  + +a k++ +AA + +yl+   e++l     +
  KHJ31135.1  98 LEWRPTLsdsllpgRRISKIKVESLEYEIYFTLSTLAYTHTLLAQTSLNplysldsalpsleQRTLIISTASKHLLSAASIHEYLSvccEQILIP---S 193
                 57877777777888557889************************997667999******999888899******************444444443...5 PP

                 .XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.........XXXXXX..................XXXXXXXXXXXXXXXXXXXXX.......XXXXXXX CS
        BRO1 167 esedlspetlkaLeklmlAqAqecflekaik.........dnkkds..................liaKlaaqvaelYeealealkkselidekeevlkk 238
                 +  dls+ t kaL +l lA+A  +++ k            +    +                  l+a+l+  +ae+ ++ l+ l++      +++++k+
  KHJ31135.1 194 PCVDLSQYTFKALASLALAEATLLVVLKDDPypfiiaqerN----KcdkewmikppempkvranLLARLCLAAAEHASKGLSILSN------ASSDGKG 282
                 789************************98435788866540....2344666777777777777********************43......3345778 PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..................X...........XXXXXX.XXXXXXX.XX CS
        BRO1 239 lldksWikhvqvKashfkAlaqyrqalaaeeakkyGeeiarlqkAlellkea..................lkskkaeelledlkglkd.vveeklk.ea 317
                  ++++ +k+++  +s  +  a+ + ++ ae + ++G +ia lq+   +l                     +k +k+++   d+ +l++ ++ + l+ + 
  KHJ31135.1 283 KINHDLLKYMEEFKSTSQGKACRFLGIGAELNGQIGTAIAWLQAGMYQLGMSaedtkmrglkrlkkdwegKKLEKKSQWGADAGKLEElRILDLLEyKW 381
                 89*********9999****************************99999888778888888888777777633344444444444443303444433245 PP

                 XXXXXXXXXXXXXXX CS
        BRO1 318 ekDNdlIYheevPse 332
                  k+Nd+I  +++P+ 
  KHJ31135.1 382 SKENDTINAQPIPPV 396
                 699999999999986 PP

>> HPTransfase  Histidine phosphotransferase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   4.1e-05      0.37      13      58 ..     230     277 ..     228     286 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 4.1e-05
                  TTSSSEEE..EES-S-EEEHHHHHHHHHHHHHHHHC-TT--EEEEEEE CS
  HPTransfase  13 kggrikld..WevprdelpknkvKlllnllliaedalprGGtitvsae 58 
                  +++r k+d  W+++ +e+pk ++ ll  l+l a++   +G +i  +a+
   KHJ31135.1 230 AQERNKCDkeWMIKPPEMPKVRANLLARLCLAAAEHASKGLSILSNAS 277
                  5566677777***********************998888877766666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       376  (0.0209716); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 3411.22
//
Query:       KHJ31136.1  [L=450]
Description: putative mannan endo-alpha-mannosidase dcw1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.2e-155  518.6  14.1   1.4e-155  518.4  14.1    1.0  1  Glyco_hydro_76  Glycosyl hydrolase family 76
    0.00023   20.4   7.4      0.025   13.7   4.0    2.6  2  Glyco_hydro_88  Glycosyl Hydrolase Family 88


Domain annotation for each model (and alignments):
>> Glyco_hydro_76  Glycosyl hydrolase family 76
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  518.4  14.1  1.5e-159  1.4e-155       1     364 [.      30     391 ..      30     393 .. 0.98

  Alignments for each domain:
  == domain 1  score: 518.4 bits;  conditional E-value: 1.5e-159
                     SXHHHHHHHHHHHHHHCETTECCTCTCBSCES-GHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHCCCTCEE-SSSTTCTCSSEHHHHHHHHHH CS
  Glyco_hydro_76   1 siksaaatiakgllkyYkgnesggtpgnlpdpyywWeagalfgalidywrltgdstyndlitqallaqagenydympanqsrtegnDDqafwgla 95 
                     sik aa+t+a++++++Y+g+++g+tpgnlpdpyywWeaga+fga+i+yw++tgd+tyn++++qall+q+ge+ dymp nq++t+gnDDq fw+l+
      KHJ31136.1  30 SIKGAAKTLATDMMSFYTGYKPGDTPGNLPDPYYWWEAGAMFGAMINYWYYTGDTTYNAMTKQALLHQTGEDGDYMPVNQTKTLGNDDQCFWALS 124
                     7999******************************************************************************************* PP

                     HHHHHHH......H--HHHHHHHHHHHHHHHHCB-SCSCCS-BBSEC..ESS--SEEEHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHH CS
  Glyco_hydro_76  96 amtaaernfpep.tdepswLalAqavfntqasrwdeetcgGGlrWqiftwnsgydyknsisngplfqlaarLarytgnetYlewAekvwdWvedv 189
                     amtaae++f++p +++ +wL+lAq+vfntq++rwd+ tcgGGlrWqif++nsgy+yknsisng++f+laarLa ytgn+tY e Aek wdW++++
      KHJ31136.1 125 AMTAAETKFENPgDKNFHWLELAQGVFNTQVRRWDSATCGGGLRWQIFQFNSGYTYKNSISNGCFFNLAARLALYTGNSTYGEQAEKAWDWMTKI 219
                     *********************************************************************************************** PP

                     SCSBTTTS-B-SEEETTTCCEEEE---HHHHHHHHHHHHHHHHHHH.--HHHHHHHHHHHHHHHHHCEECTTEEEEEE-TTSTTCCTTHHHHHHH CS
  Glyco_hydro_76 190 gliddedwlvyDgasvednctdinklqwtYnqGtylsgaaylynaT.gdekWldrvkgllnatlstffpdgnilyevacepsekcnnDqrsFkgi 283
                     gl+   d++vyDga+v dnc + +++qwtYn Gt+l g a +yn+T  + +W++rv+gll+++ s ff++ +i++e  ce s kcn DqrsFk++
      KHJ31136.1 220 GLL-APDYHVYDGAQVGDNCVTPDRNQWTYNVGTFLVGSAAMYNFTnSSPVWEQRVRGLLSSA-SIFFEN-GIMFE-GCEASGKCNVDQRSFKAY 310
                     ***.******************************************5556************8.9*****.*****.****************** PP

                     HHHHHHHHH..SHHHHHHHHHHHHHHHHHHHTTTB...TTTSB-TTTTTSSCCHHHHHHHHCCHHH............HHH CS
  Glyco_hydro_76 284 larwlaltaqlapetadtiepllrasaeaaakscsggsdgttcglkwlkgtwdgdaglgeqmsaleviqallveekkaplt 364
                     ++rwl +ta+lap+t++ti p+lr+s+ aa k+c+ g++g +cgl+w+++ +dg+ g+geqm++lev+ ++l+++++++++
      KHJ31136.1 311 FSRWLTATAELAPFTRETILPWLRSSITAAIKTCTAGASGSMCGLRWTQQANDGSIGVGEQMAVLEVLHSQLIDTVPGWVS 391
                     **************************************************************************9998876 PP

>> Glyco_hydro_88  Glycosyl Hydrolase Family 88
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   4.0   2.8e-06     0.025      23      83 ..      59     125 ..      35     219 .. 0.70
   2 !    7.1   0.1   0.00027       2.4      21      48 ..     240     267 ..     223     274 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.8e-06
                     TTCCE.HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCCCTTS-......CTTSGGGTGHHHHHHH CS
  Glyco_hydro_88  23 kenewewtnGvflsglleayeatgdkeyldyakawadslideggk......telelDdidiglllll 83 
                     ++  + w+ G++++++++++ +tgd +y +++k+   ++  e+g       t+   +d +++  l++
      KHJ31136.1  59 PDPYYWWEAGAMFGAMINYWYYTGDTTYNAMTKQALLHQTGEDGDympvnqTKTLGNDDQCFWALSA 125
                     444556*****************************99999999998888874444444444444433 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.00027
                     SSTTCCE.HHHHHHHHHHHHHHHHH--H CS
  Glyco_hydro_88  21 lkkenewewtnGvflsglleayeatgdk 48 
                     ++++n+w ++ G+fl g +++y+ t+ +
      KHJ31136.1 240 TPDRNQWTYNVGTFLVGSAAMYNFTNSS 267
                     7899*********************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3444.03
//
Query:       KHJ31137.1  [L=152]
Description: hypothetical protein EV44_g1962 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.12   11.9   0.4        0.3   10.7   0.4    1.6  1  PikAIV_N        Narbonolide/10-deoxymethynolide synthase PikA
        3.9    7.7   8.1         17    5.6   0.0    2.6  3  Bac_small_YrzI  Probable sporulation protein (Bac_small_yrzI)


Domain annotation for each model (and alignments):
>> PikAIV_N  Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.4   3.3e-05       0.3      12      25 ..      12      25 ..      12      28 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 3.3e-05
    PikAIV_N 12 aSLkEnERLRqqNr 25
                +S+  +ERLR +N 
  KHJ31137.1 12 KSVRQIERLRAENK 25
                699**********7 PP

>> Bac_small_YrzI  Probable sporulation protein (Bac_small_yrzI)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0019        17      16      38 ..       5      27 ..       4      30 .. 0.87
   2 ?   -3.2   0.0       1.1   9.8e+03      27      32 ..      77      82 ..      73      86 .. 0.57
   3 ?    3.0   4.4     0.013   1.1e+02      17      39 ..     123     145 ..     120     151 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0019
  Bac_small_YrzI 16 kyseeEiereqqiekieeemkdr 38
                    k s++E ++ +qie++  e+k  
      KHJ31137.1  5 KVSQAEWKSVRQIERLRAENKCL 27
                    579**************999965 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.1
  Bac_small_YrzI 27 qiekie 32
                    +i+k++
      KHJ31137.1 77 HIKKLQ 82
                    444444 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.013
  Bac_small_YrzI  17 yseeEiereqqiekieeemkdrq 39 
                     +s+eEi+ +++ie ++ + k  +
      KHJ31137.1 123 KSREEINIKHEIEELKSQKKSNK 145
                     79**************9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1257  (0.0701099); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1134.32
//
Query:       KHJ31138.1  [L=477]
Description: putative serine threonine-protein phosphatase 5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.9e-33  113.6   0.2    8.6e-33  112.5   0.2    1.6  1  PPP5         PPP5 TPR repeat region
    5.1e-31  108.8   0.1    8.1e-31  108.1   0.1    1.2  1  Metallophos  Calcineurin-like phosphoesterase
    5.9e-13   48.0   3.1    0.00094   18.9   0.1    3.5  3  TPR_1        Tetratricopeptide repeat
    4.4e-10   38.9   3.2     0.0082   16.2   0.1    3.5  3  TPR_2        Tetratricopeptide repeat
    3.6e-07   29.7   1.8     0.0028   17.3   0.1    2.6  2  TPR_11       TPR repeat
    2.7e-05   24.2   0.7      0.004   17.3   0.3    2.3  2  TPR_9        Tetratricopeptide repeat
    0.00026   21.5   2.7       0.04   14.6   0.4    2.7  3  TPR_16       Tetratricopeptide repeat
     0.0059   16.9   0.6       0.18   12.2   0.1    3.2  3  TPR_17       Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.052   14.4   1.4        2.2    9.3   0.1    2.8  2  TPR_14       Tetratricopeptide repeat
       0.22   12.2   0.6        2.4    9.0   0.3    2.6  2  TPR_6        Tetratricopeptide repeat
        0.7   10.3   5.8          7    7.1   0.1    3.2  3  TPR_8        Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PPP5  PPP5 TPR repeat region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.5   0.2   5.3e-36   8.6e-33       1      94 []     117     207 ..     117     207 .. 0.98

  Alignments for each domain:
  == domain 1  score: 112.5 bits;  conditional E-value: 5.3e-36
        PPP5   1 lkeceklirreaFekAIeveekesasetldlesieveksYdGprLeeeeekitqeFvkamierfkkgkklhkkyvyaillkvkellkkepslve 94 
                 l+ecek+++r aF +AIeve+++sa+e ldl+si v++sYdG+rL    +++t+eF+++mierfk+gkklhkkyvy+i+++vk++l +ep++ve
  KHJ31138.1 117 LTECEKIVKRLAFLAAIEVEDEPSAAEGLDLDSILVDESYDGVRL---GSEMTEEFISDMIERFKTGKKLHKKYVYQIVVAVKKILFDEPTMVE 207
                 689******************************************...789*****************************************97 PP

>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.1   0.1   4.9e-34   8.1e-31       4     202 ..     217     410 ..     215     412 .. 0.90

  Alignments for each domain:
  == domain 1  score: 108.1 bits;  conditional E-value: 4.9e-34
                  EEEESBTBTTCCTHHHHHHHHH..HHHHHHTTESEEEEESTSSSSSHHHHHHHHH.HHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHHHHH CS
  Metallophos   4 lvigDlHlalgggqlddllkll..ddllreekpdlvllaGDlvdrgdlekellel.laalvkypipvylllGNHe........gfeeellnkygylgi 90 
                  +++gD+H     gq+ dl++l+  + ++ e+ ++l+   GD+vdrg++++e++ l +a+++ +p  +++ +GNHe        gfe e++ ky     
   KHJ31138.1 217 TICGDTH-----GQYFDLMELFriNGFPTEKHHYLFN--GDFVDRGSWSTEIALLlYAYKWLRPMSFFINRGNHEtddmnrvyGFEGECKAKYN---- 303
                  79*****.....**********555556667777777..****************99*****99***********9999999999999999988.... PP

                  HHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEE.THHHHHHHHHHHSCHHHHCC.....HHHHHHHHHHTTCSEEEEEESSESSCSSSCSCCH CS
  Metallophos  91 fsepwrsdaevfnnlplaslgsgslkvlllhGg.spel.lvsldklgslnleleapepg.....dewlkdlekrekadwvivlgHsplyrgsgylfgd 181
                     +++ ++e f++lpla l+++  k+l+lhGg +  +  v+ld+++++n++   + ++     ++++ d        +   lg  p  rg g +fg+
   KHJ31138.1 304 -ELTFKLFSESFSALPLATLVGK--KYLVLHGGlF-SDdEVTLDDIRKINRHNQRQPGQsglmmEILWTD--------PQTNLGRGPSKRGVGMQFGP 389
                  .5668888***************..********52.3357999999999999999888899*********........9*****99999********* PP

                  HHHHHHHHHTTESEEEEESSS CS
  Metallophos 182 ealedllkkygvdlvisGHtH 202
                  + ++++++k+g+ ++i++H+ 
   KHJ31138.1 390 DITKTFCEKNGLEAIIRSHEV 410
                  *******************85 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.1   3.9e-05     0.064      14      32 ..      23      41 ..      17      42 .. 0.87
   2 !   18.9   0.1   5.8e-07   0.00094       3      33 ..      45      75 ..      43      76 .. 0.95
   3 !   15.0   0.1     1e-05     0.016       2      34 .]      78     110 ..      77     110 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.9e-05
                TT-HHHHHHHHHHHHHHST CS
       TPR_1 14 lgkydeAleyyekALelnP 32
                  ++ +A+++y  A+el+ 
  KHJ31138.1 23 AHDWPKAIDCYTAAIELDK 41
                67899************96 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 5.8e-07
                HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1  3 alynlGnayfklgkydeAleyyekALelnPn 33
                 + n+++a+ kl+ y  A+ +   A+el+Pn
  KHJ31138.1 45 FYSNRAQAHIKLEAYGYAIRDATSAIELDPN 75
                69****************************9 PP

  == domain 3  score: 15.0 bits;  conditional E-value: 1e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 ka+y+++ ay    k+++Al++ + +++  Pn+
  KHJ31138.1  78 KAYYRRAIAYTAILKPKDALKDLRFVVRKAPND 110
                 7**********************9999999986 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1   5.1e-06    0.0082       6      33 ..      15      42 ..      10      43 .. 0.88
   2 !   15.4   0.1   8.7e-06     0.014       2      33 ..      44      75 ..      43      76 .. 0.95
   3 !    6.6   0.0    0.0057       9.4       2      33 ..      78     109 ..      77     110 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 5.1e-06
       TPR_2  6 nlGlayyklgdyeeAleafekAleldPn 33
                  G+ ++++ d+ +A++++ +A+eld +
  KHJ31138.1 15 DEGNRAFAAHDWPKAIDCYTAAIELDKK 42
                579999*******************975 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 8.7e-06
       TPR_2  2 ealynlGlayyklgdyeeAleafekAleldPn 33
                  + n+++a++kl  y  A+++   A+eldPn
  KHJ31138.1 44 TFYSNRAQAHIKLEAYGYAIRDATSAIELDPN 75
                6799***************************9 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0057
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPn 33 
                 +a+y+++ ay +  ++++Al++++ +++ +Pn
  KHJ31138.1  78 KAYYRRAIAYTAILKPKDALKDLRFVVRKAPN 109
                 69*******************99877666666 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.1   1.7e-06    0.0028       1      40 [.      17      55 ..      17      57 .. 0.87
   2 !   11.2   0.2   0.00014      0.23      20      38 ..      69      87 ..      62      89 .. 0.94

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.7e-06
      TPR_11  1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayyk 40
                G+  ++  ++++Ai +Y +A++ld   a++y+n+++a+ k
  KHJ31138.1 17 GNRAFAAHDWPKAIDCYTAAIELDK-KATFYSNRAQAHIK 55
                6777777799**************7.59*********976 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00014
      TPR_11 20 AlkldPdnaeayynLGlay 38
                A++ldP+   ayy ++ ay
  KHJ31138.1 69 AIELDPNLTKAYYRRAIAY 87
                9*****************9 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1   2.1e-05     0.034       3      61 ..      18      75 ..      17      80 .. 0.92
   2 !   17.3   0.3   2.4e-06     0.004       4      66 ..      52     114 ..      50     116 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.1e-05
       TPR_9  3 aiaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapd 61
                ++a  ++dw++a+ ++   + l+ ++   +  R++++ +l+++  A++d   +++l+p+
  KHJ31138.1 18 NRAFAAHDWPKAIDCYTAAIELDKKA-TFYSNRAQAHIKLEAYGYAIRDATSAIELDPN 75
                688999****************9876.99***************************996 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 2.4e-06
       TPR_9   4 iaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapdae 66 
                 ++i  e +  a++ + + + l+P+    ++ R++++     ++ Al+dL   +++ap++ da 
  KHJ31138.1  52 AHIKLEAYGYAIRDATSAIELDPNLTKAYYRRAIAYTAILKPKDALKDLRFVVRKAPNDKDAL 114
                 6888899999*************************************************9996 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.4   2.5e-05      0.04       2      65 ..      15      74 ..      14      77 .. 0.88
   2 ?    4.2   0.9     0.043        70       3      45 ..      49      88 ..      47      91 .. 0.91
   3 ?    6.2   0.1      0.01        16       3      50 ..      83     127 ..      81     128 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.5e-05
      TPR_16  2 alaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraap 65
                ++++ a++a d+++A+  ++aa+++d+     a ++ ++++a+ ++  +  A+    +a++ +p
  KHJ31138.1 15 DEGNRAFAAHDWPKAIDCYTAAIELDK----KATFYSNRAQAHIKLEAYGYAIRDATSAIELDP 74
                5799**********************4....89************9999999966666667777 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.043
      TPR_16  3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaal 45
                +a+a++++  y  A++ ++ a+++d   P    A++ ++ a+ 
  KHJ31138.1 49 RAQAHIKLEAYGYAIRDATSAIELD---PNLTKAYYRRAIAYT 88
                7899999999999************...***********9985 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.01
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrl 50 
                 +a a+ +  ++ dA++ l+ +++++   P + +All l ++    +rl
  KHJ31138.1  83 RAIAYTAILKPKDALKDLRFVVRKA---PNDKDALLKLTECEKIVKRL 127
                 566666667899*************...99999***998887666665 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1      0.45   7.3e+02       1      21 [.      32      51 ..      32      62 .. 0.69
   2 !   12.2   0.1   0.00011      0.18       5      31 ..      69      95 ..      66      98 .. 0.83
   3 ?   -2.1   0.0       4.3     7e+03       8      22 ..     106     120 ..     103     127 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.45
      TPR_17  1 lylkaleldPnnadaynnLAe 21
                +y+ a+eld++ a +y n+A+
  KHJ31138.1 32 CYTAAIELDKK-ATFYSNRAQ 51
                78888888865.555555555 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 0.00011
      TPR_17  5 aleldPnnadaynnLAelllknGdlmt 31
                a+eldPn  +ay+ +A ++  + ++++
  KHJ31138.1 69 AIELDPNLTKAYYRRAIAYTAILKPKD 95
                9*****************976655555 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 4.3
      TPR_17   8 ldPnnadaynnLAel 22 
                 + Pn+ da+  L e+
  KHJ31138.1 106 KAPNDKDALLKLTEC 120
                 679999999888655 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.2      0.11   1.9e+02       9      33 ..      18      42 ..      10      59 .. 0.82
   2 ?    9.3   0.1    0.0013       2.2       2      43 ..      78     119 ..      77     120 .. 0.94

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.11
      TPR_14  9 eallalGdpdeAiallrralalaPd 33
                   +a+ d+ +Ai+++ +a++l+ +
  KHJ31138.1 18 NRAFAAHDWPKAIDCYTAAIELDKK 42
                55689999*************9876 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0013
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 +a++++a a+ a  +p++A++ lr ++++aP+d +a+l l +
  KHJ31138.1  78 KAYYRRAIAYTAILKPKDALKDLRFVVRKAPNDKDALLKLTE 119
                 599**********************************99976 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.98   1.6e+03      10      28 ..      21      38 ..      19      40 .. 0.80
   2 ?    9.0   0.3    0.0015       2.4       2      32 ..      79     109 ..      78     110 .. 0.95

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.98
                HHHHHHHHHHHHHHHHHHH CS
       TPR_6 10 yrklgdtdkAlealerlik 28
                + +  d+ kA++ +   i+
  KHJ31138.1 21 FAAH-DWPKAIDCYTAAIE 38
                5556.99*******99886 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0015
                 HHHHHHHHHHH.HHHHHHHHHHHHHHHHH-TT CS
       TPR_6   2 Alyklalsyrk.lgdtdkAlealerlikeYPd 32 
                 A+y++a +y + l ++ +Al+ l+ ++++ P+
  KHJ31138.1  79 AYYRRAIAYTAiL-KPKDALKDLRFVVRKAPN 109
                 9************.999**************8 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.2     0.033        54      19      33 ..      28      42 ..      28      42 .. 0.92
   2 ?    7.1   0.1    0.0043         7       2      33 ..      44      75 ..      43      76 .. 0.94
   3 ?   -0.6   0.1       1.3   2.1e+03      21      29 ..      78      86 ..      77      90 .. 0.68

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.033
                HHHHHHHHHHHHHHH CS
       TPR_8 19 eAkeyyekaleldpd 33
                +A+ +y  a+eld++
  KHJ31138.1 28 KAIDCYTAAIELDKK 42
                69***********86 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0043
                CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  2 eayynlgsiylklgdyeeAkeyyekaleldpd 33
                  y n +++++kl+ y  A+     a+eldp+
  KHJ31138.1 44 TFYSNRAQAHIKLEAYGYAIRDATSAIELDPN 75
                6799***************************8 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 1.3
                HHHHHHHHH CS
       TPR_8 21 keyyekale 29
                k+yy++a+ 
  KHJ31138.1 78 KAYYRRAIA 86
                567777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       490  (0.02733); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3328.66
//
Query:       KHJ31139.1  [L=2607]
Description: putative involucrin repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.057   14.1   0.7         25    5.6   0.2    4.1  2  WGG       Pre-rRNA-processing protein TSR2


Domain annotation for each model (and alignments):
>> WGG  Pre-rRNA-processing protein TSR2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.2    0.0014        25       7      44 ..    1469    1506 ..    1467    1643 .. 0.77
   2 ?    3.7   0.0    0.0054        96       1      71 [.    2417    2492 ..    2417    2496 .. 0.67

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0014
         WGG    7 lilhlWtaLklavengwggpdsadkrdwlagaivdlfk 44  
                  +++++W  L l+v+n+    ++++k+ +  ++i   +k
  KHJ31139.1 1469 RVIENWSNLDLSVSNQNDPIKKEEKKSDAEKEISIEVK 1506
                  6899************9999999999998887765554 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0054
         WGG    1 FeegvalilhlWtaLklaven..gwggpdsadkrdwlagaivdlfk...akeeldqedvedvLlqvmedeFevnve 71  
                  Fe g a ++h+W a++l       +  +++++  + ++++i+++++     +   + ++++ L  vm++  ++ +e
  KHJ31139.1 2417 FEVGPASAVHSWRAITLTLLSkrTVFVQQKEQDTQAVVDVIISVLSeilPPPSNFERQIQEQLSRVMNEAVDLSIE 2492
                  666778899****988876543356666677777777778887775333233345558888888888887776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2607 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2446  (0.136427); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.57u 0.34s 00:00:01.91 Elapsed: 00:00:00.57
# Mc/sec: 13738.36
//
Query:       KHJ31140.1  [L=330]
Description: putative pyridoxal kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.9e-09   36.7   0.0    4.5e-09   36.0   0.0    1.2  1  Phos_pyr_kin  Phosphomethylpyrimidine kinase
    7.7e-07   28.7   0.0    2.5e-06   27.0   0.0    1.9  2  PfkB          pfkB family carbohydrate kinase


Domain annotation for each model (and alignments):
>> Phos_pyr_kin  Phosphomethylpyrimidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0   5.1e-13   4.5e-09      86     192 ..      90     195 ..      74     219 .. 0.78

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 5.1e-13
                   TSSEEEE---SSCTSSSBSSHHHHHHHHHHTGGG-SEEE-BHHHHHHHHT---SSHHHHHHHHHHHHH.TT-SEEEEEEGGS-SSSEEEEEEEETSS CS
  Phos_pyr_kin  86 kvpvVlDPVmvaksgselleeeavealkeeLlplatvitPNlpEaeaLlgekikteedmkeaakkllk.lgakaVlikGghlegeeavvtdvlydge 181
                   ++   lDPVm  ++g+  ++e+ + a+k+  lp a++i PN++Eae L++ ki +++++++a ++l++  ++ +V+i+  +l+      + ++++g+
    KHJ31140.1  90 TLFWLLDPVMG-DNGRFYVSETIIPAYKQ-ALPYADLILPNHFEAEILSEVKILDVKTLETALSTLHSrFNVPHVIITSLNLTYPGVDKNSLIIAGS 184
                   447789***96.67888889999999998.99************************************99***********9876665445555888 PP

                   EEEEEEEE--- CS
  Phos_pyr_kin 182 eveeleaerie 192
                   +++  +++ri 
    KHJ31140.1 185 SMKSDKSPRIF 195
                   88877777764 PP

>> PfkB  pfkB family carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.34     3e+03      45      60 ..       5      20 ..       3      23 .. 0.85
   2 !   27.0   0.0   2.8e-10   2.5e-06     173     226 ..     111     165 ..      43     166 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.34
                HHHHTT-EEEEEEEEE CS
        PfkB 45 alarlgadvafigavG 60
                +l++lg+dva+i  v 
  KHJ31140.1  5 ILQSLGCDVAAINTVQ 20
                6899******999885 PP

  == domain 2  score: 27.0 bits;  conditional E-value: 2.8e-10
                 HHHHHHHHHCTESEEEEEHHHHHHHHTSCTHSHHHHHHHHHHHHHTTS.SEEEEE CS
        PfkB 173 fkeallellaladllkpneeElealtgekledieealaalhklkakga.ktvvvt 226
                   +a++++l++adl+ pn+ E+e+l++ k+ d++ +  al +l+++++  +v++t
  KHJ31140.1 111 IIPAYKQALPYADLILPNHFEAEILSEVKILDVKTLETALSTLHSRFNvPHVIIT 165
                 5689**************************8888888888888888888*****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2382.56
//
Query:       KHJ31141.1  [L=429]
Description: putative negative regulator of dna transposition protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.6e-28   96.8   0.1    1.8e-27   95.5   0.1    1.7  1  Rtt106           Histone chaperone Rttp106-like
    1.5e-05   25.0   0.2    8.6e-05   22.5   0.1    2.3  2  PH_18            Pleckstrin homology domain
  ------ inclusion threshold ------
      0.031   13.3   0.0      0.049   12.7   0.0    1.2  1  Amido_AtzD_TrzD  Amidohydrolase ring-opening protein (Amido_A


Domain annotation for each model (and alignments):
>> Rtt106  Histone chaperone Rttp106-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.5   0.1   3.1e-31   1.8e-27       2      89 .]     260     352 ..     259     352 .. 0.96

  Alignments for each domain:
  == domain 1  score: 95.5 bits;  conditional E-value: 3.1e-31
      Rtt106   2 gVkasrkakeGlLyflekgllfgfkkPllfiplediesvsfeRvsvtsrtfdlvvel.......kkeeveFsmidqeelegidefvkskgikiks 89 
                  Vka+r++ eG+L+fl+ g+l++f kP+lf+++++i +vsf+  sv srtf+l++e+       +++e+eF+m+dqe++e+i+++v+++g++++s
  KHJ31141.1 260 WVKAFRGSTEGYLFFLNCGILWAFRKPVLFLSHSKICAVSFT--SVLSRTFNLNIEIflddtesQSNEIEFTMLDQEDFENIKRYVNRHGLQDRS 352
                 59****************************************..****************998666**************************986 PP

>> PH_18  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.1   1.4e-08   8.6e-05       4      75 ..      90     153 ..      87     165 .. 0.80
   2 ?   -1.4   0.0      0.35   2.1e+03      11      31 ..     295     318 ..     293     345 .. 0.67

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 1.4e-08
       PH_18   4 eeeiifelkdvsvlsPlRkklnLvlhlskeekkpvLslvkskdskpelsiedL.kkniklavlLpvpeKknlv 75 
                 +e+i++e++++s++ P Rkkl + ++      + + +l+    s+ +++ ++L  k+ik+a lLp+peK +  
  KHJ31141.1  90 KENILLEIENISFILPQRKKLAFRFTD-----QYCCALS----SQEQVAGSKLaWKDIKYAFLLPIPEKTQAQ 153
                 789*****************9887754.....4455555....55777888887799************9865 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.35
       PH_18  11 lkdvsvlsPlRkklnLvlhl...s 31 
                 +  vs++s l +  nL +++    
  KHJ31141.1 295 ICAVSFTSVLSRTFNLNIEIfldD 318
                 556888888888888877775431 PP

>> Amido_AtzD_TrzD  Amidohydrolase ring-opening protein (Amido_AtzD_TrzD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   8.2e-06     0.049     257     305 ..     329     377 ..     309     384 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 8.2e-06
                      EESSTT--HHHHHHHHHCT...SS..HHHHCCCEEEEEEEEE-TTSEET CS
  Amido_AtzD_TrzD 257 vmkdalDlegvkaalkraglelaelaeeekakvvavlakaeadpsgsvr 305
                      +m d+ D+e +k+ ++r gl+ +++a ++kak+++v+a ++ dps+ v 
       KHJ31141.1 329 TMLDQEDFENIKRYVNRHGLQDRSMADKRKAKILNVTATTNNDPSTDVN 377
                      69999****************999********************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       912  (0.0508673); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 2940.72
//
Query:       KHJ31142.1  [L=392]
Description: putative threonine aldolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-67  227.6   0.0    2.2e-67  227.4   0.0    1.1  1  Beta_elim_lyase  Beta-eliminating lyase
     0.0063   15.5   0.0     0.0091   15.0   0.0    1.1  1  Aminotran_5      Aminotransferase class-V
  ------ inclusion threshold ------
      0.032   13.5   0.1       0.16   11.2   0.0    1.9  2  DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
      0.055   12.0   0.0       0.13   10.7   0.0    1.4  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
       0.15   11.7   0.0         21    4.8   0.0    2.3  2  PreAtp-grasp     Pre ATP-grasp domain


Domain annotation for each model (and alignments):
>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.4   0.0   6.2e-71   2.2e-67       1     291 [.      33     324 ..      33     326 .. 0.96

  Alignments for each domain:
  == domain 1  score: 227.4 bits;  conditional E-value: 6.2e-71
                      E-S-GGG----HHHHHHHHCS----CCCT--HHHHHHHHHHHHHTT-SEEEEES-HHHHHHHHHHHH-.-TTEEEEEETT-HHHHSSTTHHHHC CS
  Beta_elim_lyase   1 DLlSDsvtkgteamsdaqaaamlGdesYgedktvnrLedavaelfgkeaalfvpqGtaAnsillkill.qrgeevivtepahihfdetgaiael 93 
                      D++SD vt +t++m +a+ + +l d+++++d+t+n+Le+++ae + ++aa+fv +Gt++n+++++ +l q+ ++v++++++hi+ +e+g++a l
       KHJ31142.1  33 DFRSDVVTSPTASMLEAIKNTTLLDDVFQTDPTTNNLEAHLAERTSHQAAIFVLSGTMGNQLAIRSHLqQPPYAVLCDHRGHIFEWEAGGVASL 126
                      9*******************************************************************999*********************** PP

                      C--EEEEE-EBTTTBE-HHHHHHHS--S-T.TS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEEETTHHHHHHHHTS-CHHHH CS
  Beta_elim_lyase  94 agvklrdlknkeaGkmdlekleaaikevga.heekiklisltvTnntagGqvvsleelrevaaiakkygiplhlDgARfanaakslgeivkemf 186
                       g+  +++  ++   ++le++e+ +   ++ h+ +++lisl++T     G +++l e r+++++a+++gi++hlDgAR+++a+++ + ++ +++
       KHJ31142.1 127 CGALIKTIVPSNGEFLTLEDIEKNVVLGDEiHSTPTRLISLENTLG---GIIMPLSETRRISKFAREHGIKIHLDGARLWEAVAAGAGSLIDYC 217
                      ***9*****9997889*******88887778************988...********************************************* PP

                      TTSSEEEEESSSTT--SS-EEEEE-HH....HHHHHHHHHHHHT---SSTHHHHH..HHHHHHHHS........STTHHHHHHHHHHHHHHHHH CS
  Beta_elim_lyase 187 syvDsvtmslkKdllanvGgvlafrddeledylaerveqrkylggglrqagvlaaleagiraleeg........laslerdhktaeqlaeklel 272
                      + +Dsv+++++K+l+a+vG++l+++++    +++++++ rk +ggglrq+gvl a  a+ +al+e           +l+ +h  a++ a+   +
       KHJ31142.1 218 ELFDSVSLCFSKGLGAPVGSILVGEEA----FIKHARWIRKSIGGGLRQSGVLTA--AARVALDETfgsgpwgdGGKLKASHSLAKKIANSWTA 305
                      ***************************....************************..*******9988888888889999************** PP

                      CT--EEECCGTTCCEEEEE CS
  Beta_elim_lyase 273 vrlaiprrvytqehldyva 291
                        + + +r++t+++ ++++
       KHJ31142.1 306 RGGKLLKRTDTNMVWLDLE 324
                      9999999999999887765 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   2.5e-06    0.0091      55     177 ..      73     200 ..      62     206 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.5e-06
                  HHT-STGGGEEEESSHHHHHHHHHHHCCCC-TTTSEEEEETTSHGGGTHHHHHHHHHHTEEEEEEEBETTSCBEGGGHHHH-.....-TTEEEEEEES CS
  Aminotran_5  55 linaeseeeiiftsGtteainlvalslarslkpgdeivvteaehhanlvpwqelakrtgakvkvipldeegeldldelekll.....nektklvaith 147
                  l + +s++  if+ ++t +++l+++s +  ++p   ++  + +h  +   +  +a  +ga +k i   ++  l+l+++ek++      + t    i+ 
   KHJ31142.1  73 LAERTSHQAAIFVLSGTMGNQLAIRSHL--QQPPYAVLCDHRGHIFEW-EAGGVASLCGALIKTIVPSNGEFLTLEDIEKNVvlgdeIHSTPTRLISL 167
                  5556677889***************994..466677776666666666.5567999************************998987634444445555 PP

                  BETTTTEB--HHH...HHHHHHHTT-EEEEE-T CS
  Aminotran_5 148 vsnvtGtiqpvee...igklakkkgalvlvDaa 177
                   ++  G+i p+ e   i k a+++g+ +++D+a
   KHJ31142.1 168 ENTLGGIIMPLSEtrrISKFAREHGIKIHLDGA 200
                  67777889998754448999************9 PP

>> DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   4.5e-05      0.16      14      57 ..      55      98 ..      43     106 .. 0.86
   2 ?   -0.5   0.0      0.16   5.9e+02     128     147 ..     182     201 ..     171     232 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4.5e-05
                     HTSS-SSSSHHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHH CS
  DegT_DnrJ_EryC1 14 lksgwltsgpeveeFEkafaaylgvkhaiavssGtaAlhlaLra 57
                     l  + + ++p+++++E+ +a+ + ++ ai v sGt +++la+r 
       KHJ31142.1 55 LLDDVFQTDPTTNNLEAHLAERTSHQAAIFVLSGTMGNQLAIRS 98
                     44557888********************************9985 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.16
                      HHHHHHHHHCT-EEEEE-TT CS
  DegT_DnrJ_EryC1 128 dalkaiaakhglkvieDaAh 147
                       ++ + a++hg+k+  D A 
       KHJ31142.1 182 RRISKFAREHGIKIHLDGAR 201
                      578999********999986 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   3.8e-05      0.13      51     174 ..      63     199 ..      60     202 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 3.8e-05
                      -HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHTTS-TTEE.EEEES..TSS....HH....HHHHHHHTHHHTTCEEEEESTTSHHHHHHH CS
  Cys_Met_Meta_PP  51 nptrsvleeriaaLeggeaalavssGmaAiaaailallkaGde.ivvsd..dlY....gg....tqrllkkvlkklgievkfvdtsdleeleka 133
                       pt+++le+++a+  + +aa+ v sG+   ++ai++ l++    +++++  +++    gg    + +l+k++++  g   +  d ++   l   
       KHJ31142.1  63 DPTTNNLEAHLAERTSHQAAIFVLSGTMGNQLAIRSHLQQPPYaVLCDHrgHIFeweaGGvaslCGALIKTIVPSNGEFLTLEDIEKNVVLGDE 156
                      7*****************************9***999999665144443224554443451111344556666666666777777777777777 PP

                      CCT.TEEEEEEE.SS-TTTT----HHHHHHHHHHTT-EEEEEG CS
  Cys_Met_Meta_PP 134 ike.ntklvylE.tptnpllkvvDiekiaklakkagvlvvvDn 174
                      i++  t+l+ lE t++ + + +   ++i+k+a+++g+ + +D 
       KHJ31142.1 157 IHStPTRLISLEnTLGGIIMPLSETRRISKFAREHGIKIHLDG 199
                      8776899999997899********************9999996 PP

>> PreAtp-grasp  Pre ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.007        25      77     113 ..      49      85 ..      33      99 .. 0.81
   2 ?    4.8   0.0    0.0058        21     106     134 ..     172     200 ..     137     205 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.007
  PreAtp-grasp  77 rlgsdlLsperlldpelverlraavaerpveellpll 113
                   + ++++L +++++++ ++++l+a++aer++++ + ++
    KHJ31142.1  49 AIKNTTLLDDVFQTDPTTNNLEAHLAERTSHQAAIFV 85 
                   55778899999999*************9998866555 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0058
  PreAtp-grasp 106 veellpllpdasvarLareLGleaalpGa 134
                   +  ++pl  ++ + ++are+G++ +l Ga
    KHJ31142.1 172 GGIIMPLSETRRISKFAREHGIKIHLDGA 200
                   56799*****************9998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.30s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2664.47
//
Query:       KHJ31143.1  [L=173]
Description: putative upf0220 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-65  219.7   4.5    1.8e-65  219.5   4.5    1.0  1  UPF0220   Uncharacterised protein family (UPF0220)


Domain annotation for each model (and alignments):
>> UPF0220  Uncharacterised protein family (UPF0220)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.5   4.5     1e-69   1.8e-65       2     166 .]       5     167 ..       4     167 .. 0.98

  Alignments for each domain:
  == domain 1  score: 219.5 bits;  conditional E-value: 1e-69
     UPF0220   2 edrlfrfrkpklklensakrravgvylaGaLfalgfwlliDaaivskka.nasdvhvtfvdwipgicstlgmlivnsieksrlsgdslgqsgssvawka 99 
                 e+rl++f++p  ++ ns+++r++gvy aGa+f+l+f+ll+D+a++s+++ n+s++hv+f+dw+p+i+s+lgmli+nsiek+rls+ds+++sgs+va ka
  KHJ31143.1   5 EQRLWKFTRP--DWVNSSTTRSLGVYGAGAMFSLAFYLLLDVAVWSHSHnNGSTIHVNFTDWLPFIFSSLGMLIINSIEKTRLSADSFSYSGSGVALKA 101
                 589****999..899********************************9989************************************************ PP

     UPF0220 100 rvvLflGfallagglagslvvlilkYvvkdytefptlgmGvanvlqNllimlssvvlwvsqnvedeY 166
                 rvvLflGfa lagg+ag++++l+lkYv+ ++  +pt++mG+anvl+N  +mlss+vlw+sqn+edeY
  KHJ31143.1 102 RVVLFLGFASLAGGMAGGIAILVLKYVMGEA-VWPTIYMGIANVLSNTSVMLSSIVLWISQNMEDEY 167
                 ****************************999.59********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      220  (0.0122706); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1313.60
//
Query:       KHJ31144.1  [L=195]
Description: putative rnase iii domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-25   89.8   0.0    3.4e-25   88.6   0.0    1.5  1  Ribonucleas_3_3  Ribonuclease-III-like
    0.00014   22.5   0.0     0.0012   19.4   0.0    2.2  1  Ribonuclease_3   Ribonuclease III domain


Domain annotation for each model (and alignments):
>> Ribonucleas_3_3  Ribonuclease-III-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.6   0.0   3.8e-29   3.4e-25       2     127 ..      41     191 ..      40     192 .. 0.88

  Alignments for each domain:
  == domain 1  score: 88.6 bits;  conditional E-value: 3.8e-29
  Ribonucleas_3_3   2 eelleqaltHkSfangrkghNerLefLGdavLklsvseyllekaekdege........................ltklraslvseeslaeiAke 71 
                      +e+++ a+tHkSf++g +g N rL+fLG+++L+l+   +l+++++ ++ e                          + +++++s+e+la +A +
       KHJ31144.1  41 DEVKWLAITHKSFEQGARGFNDRLAFLGRRILNLQADLLLFSSPSIRQLEnpieiesetrvpfqhpaligltnlIDSPLTNILSKEKLASFATN 134
                      6889******************************98888888866655555566667777888888888877665667789************* PP

  Ribonucleas_3_3  72 lgLgkvlrl..rkgeeetegsgrekvladaleAliGAiyldkgaevaqefveekilkk 127
                      +g+  ++r+  r+  +++ +sg e+vla+ l A++GA  l+kg ev +++ +++ilk+
       KHJ31144.1 135 IGMRPIIRWypRM-VQDLDSSGIETVLATSLYAIVGALALEKGGEVSSDIAKNNILKP 191
                      *********9766.8889*************************************997 PP

>> Ribonuclease_3  Ribonuclease III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   1.3e-07    0.0012       1     105 []      62     176 ..      62     176 .. 0.69

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.3e-07
                     HHHHHHHHHHHHHHHHHHHHH.................HCTTSSHHHH..............HHHHHHHTSHHHHHHHHHCTTCHCCHCHH.... CS
  Ribonuclease_3   1 erLeflGDavlklaittylfe.................typdahegrl..............sklrsklvsnenlarlakklglpkflrasefdp 64 
                     +rL+flG ++l+l++   lf+                 +        +              +   ++++s+e la +a ++g+ +++r      
      KHJ31144.1  62 DRLAFLGRRILNLQADLLLFSspsirqlenpieiesetR--------VpfqhpaligltnliDSPLTNILSKEKLASFATNIGMRPIIR------ 142
                     59*****************99555555544444433332........244444333443333444677777888888888888888887...... PP

                     ..........HHCCSTTCHCTSHHHHHHHHHHHHHHHHHCT CS
  Ribonuclease_3  65 prnwlppgyklsddekedddadkvladvvEAliGaiyldsg 105
                        w p       ++ ++++ + vla+ + A++Ga+ l++g
      KHJ31144.1 143 ---WYP----RMVQDLDSSGIETVLATSLYAIVGALALEKG 176
                     ...666....44566666899****************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       260  (0.0145016); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1365.42
//
Query:       KHJ31145.1  [L=586]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      6e-21   74.4  10.9    0.00058   20.6   0.1    6.8  7  WD40         WD domain, G-beta repeat
    1.5e-16   60.4   1.8     0.0028   17.9   0.0    6.1  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    4.2e-05   23.4   0.1       0.16   12.0   0.0    3.4  3  WD40_3       WD domain, G-beta repeat
    0.00057   18.9   0.4     0.0068   15.4   0.1    2.5  2  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0         4   1.8e+04       5      16 ..      61      74 ..      58      74 .. 0.62
   2 !   20.6   0.1   1.3e-07   0.00058       6      37 ..     280     312 ..     275     313 .. 0.86
   3 !   18.1   0.3     8e-07    0.0036       5      38 .]     321     355 ..     317     355 .. 0.82
   4 !    7.4   0.0    0.0019       8.5      12      38 .]     371     399 ..     362     399 .. 0.79
   5 ?    4.4   0.0     0.018        80       8      34 ..     410     433 ..     401     439 .. 0.73
   6 ?    4.4   0.0     0.017        75      18      37 ..     506     525 ..     484     526 .. 0.70
   7 !   20.5   0.1   1.4e-07   0.00063       2      37 ..     531     569 ..     530     569 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 4
                EEEESSSS..EEEE CS
        WD40  5 rtltGHss..vtsl 16
                +++ GH+   vt +
  KHJ31145.1 61 TSYFGHDReeVTRI 74
                45779932468877 PP

  == domain 2  score: 20.6 bits;  conditional E-value: 1.3e-07
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +l+ H + v+ ++fs dg+ las+++Dgt+ i+
  KHJ31145.1 280 ELDRHsGEVWQVKFSNDGTKLASCGEDGTCIIY 312
                 56779455**********************997 PP

  == domain 3  score: 18.1 bits;  conditional E-value: 8e-07
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +tl +   +++s+a+spd ++++++  D++  +W+
  KHJ31145.1 321 QTLITSeLGICSIAWSPDDSLIVTCANDKHATLWN 355
                 5555543459***************99*******8 PP

  == domain 4  score: 7.4 bits;  conditional E-value: 0.0019
                 SEEEEEEETTSSEEEEEE..TTSEEEEEE CS
        WD40  12 svtslafspdgawlasGs..dDgtvriWd 38 
                 +v+s+ + pdg+ +++G+  + +++  W+
  KHJ31145.1 371 PVSSCVWAPDGQSFVTGCldKERNLCQWN 399
                 598888***********743677777776 PP

  == domain 5  score: 4.4 bits;  conditional E-value: 0.018
                 ESSSSEEEEEEETTSSEEEEEETTSEE CS
        WD40   8 tGHssvtslafspdgawlasGsdDgtv 34 
                 ++H  v +la+s +g++l+ +  D+  
  KHJ31145.1 410 RTH-RVQDLAVSNNGHYLV-AL-DNET 433
                 478.8************98.55.4444 PP

  == domain 6  score: 4.4 bits;  conditional E-value: 0.017
                 EETTSSEEEEEETTSEEEEE CS
        WD40  18 fspdgawlasGsdDgtvriW 37 
                    + ++++ Gs+ g ++iW
  KHJ31145.1 506 GGANESFVVVGSEEGYIYIW 525
                 4557788999********** PP

  == domain 7  score: 20.5 bits;  conditional E-value: 1.4e-07
                 EEEEEEESS.SS.EEEEEEETTSSEE.EEEETTSEEEEE CS
        WD40   2 qclrtltGH.ss.vtslafspdgawl.asGsdDgtvriW 37 
                 +++ +l+GH ++  t++++sp  + + a+++dD +vriW
  KHJ31145.1 531 KLIEKLEGHrKGcCTAVSWSPVDPCMfATAGDDTKVRIW 569
                 677789****7757***********6368899******* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   6.2e-07    0.0028      28      90 ..     277     336 ..     266     338 .. 0.89
   2 !    6.8   0.0    0.0019       8.4      40      72 ..     329     361 ..     324     367 .. 0.85
   3 ?    3.7   0.0     0.017        75      38      65 ..     369     396 ..     364     399 .. 0.85
   4 !   10.6   0.1   0.00012      0.56      24      79 ..     400     452 ..     391     460 .. 0.87
   5 !    6.3   0.0    0.0026        12      43      81 ..     457     495 ..     452     504 .. 0.87
   6 !   13.9   0.0   1.1e-05     0.051      49      90 ..     509     550 ..     507     552 .. 0.95

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 6.2e-07
  ANAPC4_WD40  28 rvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                   v +l  d +++ev ++++++dg+ La   +dg++ ++++ + +++++l +++   ++++ W+
   KHJ31145.1 277 SVIEL--DRHSGEVWQVKFSNDGTKLASCGEDGTCIIYEVGTFDLLQTLITSEL-GICSIAWS 336
                  55566..78999*************************************88877.6******7 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0019
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrlldaesgkv 72 
                   + s+aW+pd++l++   +d +  l ++++g  
   KHJ31145.1 329 GICSIAWSPDDSLIVTCANDKHATLWNSSTGVS 361
                  6889*********************99999865 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.017
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrll 65 
                  ++ v+s  W pdg+ ++ ++ d e +l+
   KHJ31145.1 369 GEPVSSCVWAPDGQSFVTGCLDKERNLC 396
                  78899***************99887776 PP

  == domain 4  score: 10.6 bits;  conditional E-value: 0.00012
  ANAPC4_WD40  24 lngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                  lngq v++    ++ ++v++La +++g+ L+   +++++ +++  + ++  +l+ k
   KHJ31145.1 400 LNGQLVYDW---GRTHRVQDLAVSNNGHYLVALDNETKIYVYNFVTRELEYQLDLK 452
                  899*****9...999***************************99998887777665 PP

  == domain 5  score: 6.3 bits;  conditional E-value: 0.0026
  ANAPC4_WD40  43 sLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  s++ +++ + L v   +ge+r++d  + +++++++ +++
   KHJ31145.1 457 SVSISQNSRQLLVNKLNGEIRMIDLDTRQTIREFKSGED 495
                  5666789999***********************998765 PP

  == domain 6  score: 13.9 bits;  conditional E-value: 1.1e-05
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  ++++ +v+ ++g + + + esgk++++l+ +++ + t ++W+
   KHJ31145.1 509 NESFVVVGSEEGYIYIWHKESGKLIEKLEGHRKGCCTAVSWS 550
                  78999************************************7 PP

>> WD40_3  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.0    0.0031        14       5      35 ..     283     313 ..     279     321 .. 0.94
   2 ?    1.0   0.0     0.099   4.4e+02      23      56 ..     343     377 ..     326     378 .. 0.71
   3 !   12.0   0.0   3.5e-05      0.16       8      40 ..     412     444 ..     407     447 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0031
      WD40_3   5 rHsvgIkklfpnpsGtrlvfiDekgdgfvyn 35 
                 rHs ++ ++   ++Gt+l+   e+g +++y+
  KHJ31145.1 283 RHSGEVWQVKFSNDGTKLASCGEDGTCIIYE 313
                 799999************************7 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.099
      WD40_3  23 vfiDekgdgfvynPvs.eelleipdfpstvkgvLW 56 
                 v   +++++ + n  +  +  ++p+f + v+ ++W
  KHJ31145.1 343 VTCANDKHATLWNSSTgVSRRKLPKFGEPVSSCVW 377
                 55556666667777775666799************ PP

  == domain 3  score: 12.0 bits;  conditional E-value: 3.5e-05
      WD40_3   8 vgIkklfpnpsGtrlvfiDekgdgfvynPvsee 40 
                 + +  l + ++G +lv  D++++ +vyn v++e
  KHJ31145.1 412 HRVQDLAVSNNGHYLVALDNETKIYVYNFVTRE 444
                 5678889999******************99987 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   1.5e-06    0.0068     178     221 ..     275     319 ..     238     354 .. 0.76
   2 ?    0.5   0.0     0.051   2.3e+02      66     104 ..     412     449 ..     404     469 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.5e-06
    Ge1_WD40 178 eegllkieehs.liveaafspdGtalatasedGevkffqvylede 221
                 +++++++++hs ++ +  fs dGt la + edG+   + v  +d 
  KHJ31145.1 275 SHSVIELDRHSgEVWQVKFSNDGTKLASCGEDGTCIIYEVGTFDL 319
                 4589******99**********************99999977665 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.051
    Ge1_WD40  66 gevldlafahvsskillavdekgslfvykveeveskllv 104
                  +v+dla +  + + l+a+d++++++vy+  + e + + 
  KHJ31145.1 412 HRVQDLAVSN-NGHYLVALDNETKIYVYNFVTRELEYQL 449
                 5788988764.5678999999999999987665544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (586 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4029.64
//
Query:       KHJ31146.1  [L=935]
Description: putative cytochrome b561 ferric reductase transmembrane [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.3e-07   29.8   7.4      1e-06   28.9   7.4    1.5  1  Cytochrom_B561  Eukaryotic cytochrome b561
  ------ inclusion threshold ------
      0.011   15.5   6.8      0.025   14.4   6.8    1.6  1  DUF2427         Domain of unknown function (DUF2427)
        2.1    8.1   7.2        4.8    6.9   7.2    1.6  1  DUF3177         Protein of unknown function (DUF3177)


Domain annotation for each model (and alignments):
>> Cytochrom_B561  Eukaryotic cytochrome b561
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   7.4   1.7e-10     1e-06       2     131 ..      69     195 ..      68     199 .. 0.86

  Alignments for each domain:
  == domain 1  score: 28.9 bits;  conditional E-value: 1.7e-10
                     HHHHHHHHHTHHHHHHHTHHHHS-S...-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--SS-SHHHHHHHHHHHHHHHHHHHHHHHHTS CS
  Cytochrom_B561   2 HpvlmviGfvllmgeaiLvyrvsstrklskktkkllHlilqllalilavvgllavfksknekeianlyslHswlGlvtvilfllqlvlGfvlfll 96 
                     H +l vi f++++  aiL+ +    ++ s+ +  +lH+ +q+l ++l++v + + +        + +++ H  +Gl+  +l+l+q ++G v++l 
      KHJ31146.1  69 HGILAVITFLIIVPAAILIAQF---YSRSHILALRLHIYFQILTILLSTVVFTLGWFAVG--PSRSFTNPHHGIGLAIYVLVLVQGLFGYVIYLR 158
                     99****************9886...6789***************9999887766555444..4699****************************9 PP

                     S---HHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHH CS
  Cytochrom_B561  97 pklskklralllpl..HvllGlvifvlaivtallGll 131
                     ++ +++ +++ l +  H ++G ++ +l+++++ lGl+
      KHJ31146.1 159 SNDRRRPTKSSLSVmlHEWVGKATALLGLAQVPLGLT 195
                     7777665554444448*******************94 PP

>> DUF2427  Domain of unknown function (DUF2427)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   6.8   4.1e-06     0.025       7     100 ..      55     153 ..      50     158 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 4.1e-06
     DUF2427   7 yfttdephksalwvHiilmtlalvvvyPvalvLslaksrwylpvqivnlvlavlglllghi.....ykgstPelypnniyaklswillillavqvvlav 100
                 +f++ +++++++++H il +++++++ P+a+ ++   sr +++++ +++ + +l +ll  +     + +  P+    n ++ ++  +++l++vq +++ 
  KHJ31146.1  55 RFASLKQYHQIIKAHGILAVITFLIIVPAAILIAQFYSRSHILALRLHIYFQILTILLSTVvftlgWFAVGPSRSFTNPHHGIGLAIYVLVLVQGLFGY 153
                 678888999**********************************99988765555443332221112567778866699999999999999999999885 PP

>> DUF3177  Protein of unknown function (DUF3177)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   7.2    0.0008       4.8      12      62 ..      75     125 ..      64     183 .. 0.89

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0008
     DUF3177  12 vlftvilPlilliwalvkkaeaiqrlliiYWrvasLlaitvyLliaelpvg 62 
                 ++f++i+P  +li+ + ++++ +  +l iY+++ ++l+ tv++ ++ + vg
  KHJ31146.1  75 ITFLIIVPAAILIAQFYSRSHILALRLHIYFQILTILLSTVVFTLGWFAVG 125
                 4699*************************************9988877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (935 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1218  (0.0679346); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.81u 0.27s 00:00:01.08 Elapsed: 00:00:00.45
# Mc/sec: 6208.00
//
Query:       KHJ31147.1  [L=937]
Description: putative secretory pathway protein sec39 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   9.2e-213  708.8   9.9   1.2e-212  708.5   9.9    1.1  1  Sec39     Secretory pathway protein Sec39


Domain annotation for each model (and alignments):
>> Sec39  Secretory pathway protein Sec39
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  708.5   9.9  6.7e-217  1.2e-212       2     747 ..      13     807 ..      12     810 .. 0.94

  Alignments for each domain:
  == domain 1  score: 708.5 bits;  conditional E-value: 6.7e-217
                 XXXXXXXXXXXXXXXXXXXXXX--SHH...HHHHHHHHS-TTS-G....GGGGHH--------------------.------------GGGHH-..... CS
       Sec39   2 llavhlAssadidalasLtsrrpkvlskellLrilLtylPEtldpseYvkllkelasgseeeetdeeddvdlspv.eelseeearkrvrklrllpLklp 99 
                 lla+ +As+adi al++L+s+++  +s+ellLrilL+ylPEtl++++Y++llk+las+++e+       v  +p+ +e+ e   +   +kl+llpL++p
  KHJ31147.1  13 LLATKYASQADIPALNALISQYR--ISRELLLRILLSYLPETLESKSYTSLLKNLASSQNEQ------SVVYAPIeDEICEGNDEILGKKLHLLPLAWP 103
                 8*******************987..5567**************************7766655......47888997899999999999*********** PP

                 ........-SHHHHHHHHHHHHHTT-TTTTHHHHHT-.....-HHHHHHHHHTHHHHHHHHHHTT--....--HHHHHHS-HHHHHHHH----....-- CS
       Sec39 100 dapeeastdlltsFLihRalriDeetgllsellelvepfldrsealrtWlisvvlpLlrlnyeyypdeeealsLeefeslsdreavnllLskt....ee 194
                  +p +  td++++FLihR lriDe+tgl+ e++ l++pf++  ++l++W++s++lpLlrlnyeyyp++ + +s+++f +l++r+a+ +lLs+t    + 
  KHJ31147.1 104 CTPCDIATDIFSTFLIHRCLRIDESTGLTIEIPTLLDPFIEMYPHLKKWMVSTILPLLRLNYEYYPNNVKYISIRNFDELDARAAIAYLLSRTgkerQI 202
                 **********************************************************************************************99644 PP

                 .------HHHHHTHHHHHHHH...................................T-HHHHH...........HHHSSTTT--HHHH......HH.HT CS
       Sec39 195 .seenvgrdlrglvgPwlygknrrkrrklsesakkes................egWeevnewLlsqalkswkvaveaveewdgpedvdLGgyeees.ls 275
                  s+  vgrdl+glvgP l+  +r+ r+++ +s +++                  +Wee + w++ qa  swk+av+a+e wdgp+d dLG y+ es ++
  KHJ31147.1 203 nSSPYVGRDLKGLVGPMLCAGTRKMRQNRLKSCQSQFtfvesilsvpssnqlyMQWEEAFLWIFGQAEASWKTAVDAIEGWDGPDDYDLGCYDIESpFT 301
                 67788**************9988776655555444448*******************************************************8888** PP

                 -------HHHHHHHHHHHHH...HHHH.TSTTHHHHHHHHHHHHT................................TS-SEEEETTEEEEHHHHHHHH CS
       Sec39 276 eeeqqeleeryaraalaivYlvsetseealegaheilsrlaelldldpppslssaasslppvelde.sslsstsrasllrndlleesnpLtapskesls 373
                 e+e+  l++ry+r+a+a++Y++s++s++al+g h+il r+ +l+d+++ psl+s++  l+pv++ + ++ls+ s   +  ++l++++np+t+ +  s++
  KHJ31147.1 302 EDEKLFLKRRYIRTAIATAYAISKESRDALMGIHRILVRILSLIDMHTIPSLESSCIDLKPVKQLDkDNLSQFSV--INLKNLMNDENPMTKLTDFSIN 398
                 **************************************************************9988677788888..4567899999************ PP

                 HHHHT--SS....-H......HHHH.HHHTS-HHHHHHHHHHHHHHHTT-..SSHHHHHHHHHHTTT..............-TTS--SSSTTS-HHHHH CS
       Sec39 374 llealllsariltslghplsvkeaaelilledeeeQlaelrkllselskkgskkddkdwqklrnellwLrdwgaeeee...ssskgkgvfgklsreeie 469
                 +l+a l+s  ++++l+++++v+ aa l+l++de  Q + ++kl+  l +++sk+ d++ +++rnellwLr+wg+++++      +g g++g+ls+e+ie
  KHJ31147.1 399 FLHASLVSSALCDRLECSINVNYAATLALQKDEYLQISFFNKLMLLL-QNKSKSGDEFFIRVRNELLWLRSWGVKQHSnekCIGSGLGILGQLSEEFIE 496
                 ***********************************************.4447************************99877567899************ PP

                 HHHHHHHHHTT-HHHHHHH........HHHTT-TTHHHHHHHHHHHH-SS--TTSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTS---- CS
       Sec39 470 seiLkaLLsagefdlakelYedss.kplsseqvedlvlkaaleayDnAsNgnrtrggmkkaddiLqafkktleksspelkrleaLlkathaLseYsLvl 567
                 +e+Lk LLs+g+++la+ lYe+s+ + +s++++ ++vl+aa   yD A+N+n +rg +kk++diL++f+ tl++s++ ++++++Ll++t +++ Y+Lv+
  KHJ31147.1 497 TEFLKVLLSNGCYNLAQTLYETSKnQLISRDTLCEVVLAAARGQYDRATNANISRGALKKCNDILKTFSITLSQSTQ-YQKMQKLLQLTCEIEPYRLVF 594
                 ***********************669*************************************************99.********************* PP

                 -------HHHHHHTT-THHHHHHHHHHSTTGGG-HHHHHHHHHHHHHH--S.................HHHHHHHHHHHHHHHHHHTT-HHHHHHHHHH CS
       Sec39 568 kqGvpfkPvsirvhsdplsLIskvLeqNpksYtklddlleigrnLveaglt................ekksaerrilamcIeaALaedDFetAYsyvvn 650
                 k+G+p+kP  +  h+dp+ +++k+LeqNp+sY+k+ +++++++++v+agl                 + + a+ r++amcI+aAL edDFetAY yv++
  KHJ31147.1 595 KKGEPLKPAILCIHEDPILILGKILEQNPNSYKKIAEFIDMAKKMVQAGLIknkeghqvhqseiydeDLVVAKSRVIAMCIDAALFEDDFETAYFYVKT 693
                 *******************************************************************9******************************* PP

                 HH..................HHH-HHHHHHHHHHHHHHHHHHHH---T....G.-HHH...........HHHHHHHHHHHHHHS-GGGHHHHHHHHHHH CS
       Sec39 651 rL............steasekkaekkkedeeddisWraalqaGkYrsp....t.pteigeaslnpeirhLeqrmelLsqaLrlaPpeeleevlnaWrrc 732
                  L             +++++++++++ +d+ ++++WraalqaGkYr +    + + +  +   n+ei+hLe+rm+++s+a++laP+e+l e+ln++rrc
  KHJ31147.1 694 YLkattgsalvedvDSKTITRTQTASSTDKMNNWLWRAALQAGKYRGNgkatNlNITFDTRGRNQEISHLEKRMDCISLAIELAPKETLLEILNVYRRC 792
                 **99999998887633444467888999999*****************876435566666999************************************ PP

                 HHHHTTSSTT-S--X CS
       Sec39 733 Eeelesllkqeaeee 747
                 Eeel+sll+q++ee 
  KHJ31147.1 793 EEELDSLLQQNIEEK 807
                 ***********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (937 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.26s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 6581.10
//
Query:       KHJ31148.1  [L=178]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.038   13.5   0.0      0.049   13.2   0.0    1.1  1  Casc1          Cancer susceptibility candidate 1
      0.078   13.1   0.1       0.13   12.4   0.1    1.3  1  Col_cuticle_N  Nematode cuticle collagen N-terminal domain


Domain annotation for each model (and alignments):
>> Casc1  Cancer susceptibility candidate 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   5.5e-06     0.049      33      93 ..     100     161 ..      83     172 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 5.5e-06
       Casc1  33 kryidep.....ivDiedslireWllqldieneiifsletklvryelyiskkeeeeakaargyvtd 93 
                  r + +p     i  i +  +r W ++l i  +ii+s++++l+++++ i+    +e +a+++y  +
  KHJ31148.1 100 SRNAFFPkeladIIAIRQRRERAWHARLLICTTIISSIDSALANFQDEIE----KEVVAFKAYLRQ 161
                 44444556644456666778999***************************....689999998766 PP

>> Col_cuticle_N  Nematode cuticle collagen N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   1.4e-05      0.13      12      44 ..     128     160 ..     127     162 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.4e-05
  Col_cuticle_N  12 lsslitlpsiyndiqsfqsevldemdefktrad 44 
                    l++  ++ si + + +fq+e++ e+  fk++ +
     KHJ31148.1 128 LICTTIISSIDSALANFQDEIEKEVVAFKAYLR 160
                    7888999999999****************9866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1306.38
//
Query:       KHJ31149.1  [L=148]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.084   12.6   8.6       0.89    9.3   5.2    2.8  2  DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
        2.2    7.8  12.0        3.9    7.0   0.9    3.4  3  zf-ribbon_3     zinc-ribbon domain


Domain annotation for each model (and alignments):
>> DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1    0.0063        56      22      28 ..       9      15 ..       7      15 .. 0.88
   2 ?    9.3   5.2   9.9e-05      0.89       3      24 ..      51      74 ..      50      79 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.0063
                    SS----- CS
  DNA_RNApol_7kD 22 eCGhRil 28
                    +CG+R++
      KHJ31149.1  9 HCGFRVF 15
                    8****96 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 9.9e-05
                    -SSS--B--..--SSS----SSS- CS
  DNA_RNApol_7kD  3 CgeCgaevs..lkkgdpiRCkeCG 24
                    Cg+Cg+++   ++  ++ +C++CG
      KHJ31149.1 51 CGNCGSKNHatDNCLAATKCRNCG 74
                    *******995566669*******9 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.18   1.6e+03      21      24 ..       9      12 ..       8      13 .. 0.69
   2 ?    6.2   1.7   0.00076       6.8      14      25 ..      46      57 ..      42      58 .. 0.87
   3 ?    7.0   0.9   0.00043       3.9      16      25 ..      67      76 ..      66      84 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.18
  zf-ribbon_3 21 yCGt 24
                 +CG 
   KHJ31149.1  9 HCGF 12
                 8886 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.00076
  zf-ribbon_3 14 sddnvCpyCGtk 25
                 s+++ C +CG+k
   KHJ31149.1 46 SRAPSCGNCGSK 57
                 67999*****87 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.00043
  zf-ribbon_3 16 dnvCpyCGtk 25
                 +++C +CG++
   KHJ31149.1 67 ATKCRNCGGP 76
                 5788888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (148 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       908  (0.0506442); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1130.62
//
Query:       KHJ31150.1  [L=420]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       531  (0.0296168); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2873.70
//
Query:       KHJ31151.1  [L=173]
Description: hypothetical protein EV44_g4130 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       273  (0.0152267); expected 358.6 (0.02)
Passed bias filter:                      257  (0.0143343); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1348.96
//
Query:       KHJ31152.1  [L=575]
Description: hypothetical protein EV44_g6023 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.5e-48  162.6   7.0    1.7e-36  125.5   1.3    2.2  2  cobW             CobW/HypB/UreG, nucleotide-binding domain
    3.6e-21   74.9   0.1    8.1e-15   54.5   0.0    2.6  2  CobW_C           Cobalamin synthesis protein cobW C-terminal 
    0.00033   19.7   0.1       0.21   10.5   0.0    2.3  2  MeaB             Methylmalonyl Co-A mutase-associated GTPase 
     0.0093   15.9   0.1     0.0093   15.9   0.1    1.8  2  MobB             Molybdopterin guanine dinucleotide synthesis
  ------ inclusion threshold ------
      0.012   15.9   0.0      0.027   14.9   0.0    1.7  1  AAA_16           AAA ATPase domain
      0.019   15.0   0.0      0.048   13.7   0.0    1.6  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
       0.02   14.5   0.1          3    7.4   0.0    2.6  2  GTP_EFTU         Elongation factor Tu GTP binding domain
      0.029   13.4   0.7      0.044   12.8   0.0    1.6  2  T2SSE            Type II/IV secretion system protein
      0.052   13.7   0.0      0.094   12.9   0.0    1.5  1  AAA_33           AAA domain
      0.071   12.8   0.0       0.12   12.1   0.0    1.3  1  Viral_helicase1  Viral (Superfamily 1) RNA helicase
      0.084   12.9   0.0        0.9    9.6   0.0    2.3  2  CbiA             CobQ/CobB/MinD/ParA nucleotide binding domai
      0.092   11.0   5.9       0.15   10.3   5.9    1.2  1  CDC45            CDC45-like protein
       0.11   12.2   0.0       0.28   11.0   0.0    1.6  1  AAA_29           P-loop containing region of AAA domain
       0.11   12.9   0.2       0.65   10.4   0.0    2.3  2  AAA              ATPase family associated with various cellul
       0.31   11.6   2.4        0.4   11.2   0.0    2.4  3  AAA_18           AAA domain
       0.56    8.4   9.1       0.83    7.8   9.1    1.2  1  Nop14            Nop14-like family
        3.3    5.7  19.4        5.8    4.9  19.4    1.3  1  DNA_pol_phi      DNA polymerase phi


Domain annotation for each model (and alignments):
>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.5   1.3   1.6e-39   1.7e-36       1     104 [.      33     146 ..      33     169 .. 0.87
   2 !   40.4   0.4   2.1e-13   2.3e-10     107     176 ..     174     262 ..     159     263 .. 0.94

  Alignments for each domain:
  == domain 1  score: 125.5 bits;  conditional E-value: 1.6e-39
                 EEEEEEESTTCCHHHHHHHHH.CT--SS-EEEEESS-SSCHCCCCCCHCCCT......EEEETTTTECCHCTT-HHHHHHHHHHHHTT-SEEEEEECTT CS
        cobW   1 pvtvltGflGsGKTtLlnhll.enraglklavivNefgevsiDaellretgve.....ivelenGciCctlredllkelealeereerldviliEttGl 93 
                 pvt+l+GflGsGKTtLl+h+l +n++gl++avivN++++++iDa+l+++++v+     +++l+nGciCctlr dll+e+ +l+++   +++++iE+tG+
  KHJ31152.1  33 PVTLLSGFLGSGKTTLLEHILrSNEHGLRIAVIVNDMSSLNIDASLIQQHTVSeskekLIQLQNGCICCTLRGDLLEEIVRLARTD-TVQYVVIESTGI 130
                 79*******************999***********************88755555667****************************.9*********** PP

                 TTHHHH..HTT...SH CS
        cobW  94 aePapv..aft...ee 104
                 +eP++v  +ft   ++
  KHJ31152.1 131 SEPMQVaeTFTtefSK 146
                 ******6544433322 PP

  == domain 2  score: 40.4 bits;  conditional E-value: 2.1e-13
                 HHCCCECEEEEEEETTTH.....................CCHCCHHHHHHHHHHTSSEEEEE-HHHHCHC..HHHHHHHHHHHHTTS-EE CS
        cobW 107 ksdltldavvavvDaknl....................eaeeekieekaedqlaaadllvlnKtDlldeeallekleerlrqlnpeakvl 176
                 ++ ++ld++v vvDa nl                     ++e++i++++ dql++ad++v+nK+D +d++++  ++ + +++lnp+akv+
  KHJ31152.1 174 HKLARLDTTVSVVDAFNLfhnfntseflsdrygkdqiiPEDERTITDLMVDQLEFADVIVVNKIDAVDNKTK-GRVLALIKKLNPTAKVI 262
                 566899*********999*******************9889*****************************87.9*************997 PP

>> CobW_C  Cobalamin synthesis protein cobW C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   2.3e-06    0.0025       1      23 [.     320     342 ..     320     351 .. 0.91
   2 !   54.5   0.0   7.6e-18   8.1e-15      27      94 .]     423     513 ..     402     513 .. 0.90

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 2.3e-06
      CobW_C   1 issfvfrarrpfdperleellee 23 
                 issfv+rarrpf+p+rl +l+++
  KHJ31152.1 320 ISSFVYRARRPFHPKRLFDLIHD 342
                 79*******************98 PP

  == domain 2  score: 54.5 bits;  conditional E-value: 7.6e-18
      CobW_C  27 egilRaKGivwlagkpd.alvlqgvggrlrlepagawwaa......................ededrrseLVfIGrdldkealeeaLdacl 94 
                  g+lR+KG+ wla++p    +++++gg+l+l+  g+w  +                      +++drr+e+VfIG++++++ l e L++cl
  KHJ31152.1 423 SGLLRSKGFYWLATRPYqIGEWSQAGGMLTLGGGGPWFCTierdewpedadivksieadfqgRWGDRRQEIVFIGEKINQKGLSELLEECL 513
                 79**************99**************88887777**************************************************7 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0    0.0002      0.21      34      77 ..      37      79 ..      22      95 .. 0.85
   2 !    6.6   0.1    0.0031       3.2     166     194 ..     226     254 ..     216     274 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.0002
                EEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE------------ CS
        MeaB 34 ltGvPGaGkstlvealglelrrrGkrvavlavDPsspftGGsil 77
                l G+ G+Gk tl+e++  +  ++G r+av+  D ss     s++
  KHJ31152.1 37 LSGFLGSGKTTLLEHIL-RSNEHGLRIAVIVNDMSSLNIDASLI 79
                6899**********976.5689***********99987766665 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0031
                 HHH-SEEEEE---HHHHHHHHHHHHHHHH CS
        MeaB 166 leiaDiivvnkaDkkeaekaarelraale 194
                 le aD+ivvnk D  + +   r l  + +
  KHJ31152.1 226 LEFADVIVVNKIDAVDNKTKGRVLALIKK 254
                 89***********8877766666655544 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   8.8e-06    0.0093       4      44 ..      37      76 ..      34      83 .. 0.89
   2 ?   -3.4   0.8       7.8   8.3e+03      40      57 ..     554     571 ..     551     573 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 8.8e-06
        MobB  4 ivgksgsGKTtLleklipelkarglrvgtiKhahhgfdvdk 44
                + g+ gsGKTtLle++++  +++glr+++i  +  ++++d 
  KHJ31152.1 37 LSGFLGSGKTTLLEHILRS-NEHGLRIAVIVNDMSSLNIDA 76
                67999**********9986.899*******99999999885 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 7.8
        MobB  40 fdvdkpgkDsyrhrkAGA 57 
                 +d d+++ D   h++AG 
  KHJ31152.1 554 MDPDDEDHDHAGHNHAGH 571
                 78999999*****99996 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   2.5e-05     0.027      23      51 ..      31      58 ..      22     190 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.5e-05
      AAA_16 23 rpelvllsGesGvGKsslvrellralekd 51
                + +++llsG  G+GK++l++++lr+ e +
  KHJ31152.1 31 QLPVTLLSGFLGSGKTTLLEHILRSNE-H 58
                44899******************7544.3 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   4.6e-05     0.048      20      45 ..      33      58 ..      16      65 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 4.6e-05
                EEEEEEESTTSSHHHHHHHHHHHTT- CS
        TsaE 20 dvilLeGdLGaGKTtlvrglakalgv 45
                 v lL+G LG+GKTtl  +++++ ++
  KHJ31152.1 33 PVTLLSGFLGSGKTTLLEHILRSNEH 58
                3689****************998765 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.018        19      12      27 ..      41      56 ..      28      94 .. 0.87
   2 ?    7.4   0.0    0.0028         3     119     160 ..     224     265 ..     174     378 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.018
                TTSSHHHHHHHHHHHT CS
    GTP_EFTU 12 vDhGKtTLtdrLlykt 27
                + +GKtTL++++l ++
  KHJ31152.1 41 LGSGKTTLLEHILRSN 56
                568*********9765 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0028
                 HHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHHHHHHHHHHH CS
    GTP_EFTU 119 lkegvpiivfiNKmDrlkaelkeiveevkqklsrkeekleky 160
                  +++   ++++NK+D ++++ k  v ++ +kl+ + + +e+ 
  KHJ31152.1 224 DQLEFADVIVVNKIDAVDNKTKGRVLALIKKLNPTAKVIEST 265
                 56667789*********8888888777777775553333332 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   4.2e-05     0.044     112     173 ..      19      76 ..       6     106 .. 0.71
   2 ?   -3.6   0.1       4.3   4.5e+03      12      44 ..     216     245 ..     214     273 .. 0.50

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.2e-05
       T2SSE 112 ealkekiaevlrkavrerglilvsGgTgsGKttllyallkeinksderivtvEDpvEiqleg 173
                 e+ +e+ ++ +r+      + l+sG  gsGKttll  +l   ++  +  v+v D   +++++
  KHJ31152.1  19 ESSDEQSKSNIRQL----PVTLLSGFLGSGKTTLLEHILRSNEHGLRIAVIVNDMSSLNIDA 76 
                 44555555555555....8899*****************98777755557889987777754 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 4.3
       T2SSE  12 ekvsdihvekpervkvrervdgielreveelek 44 
                 ++++d++v + e + v   v++  +++v + +k
  KHJ31152.1 216 RTITDLMVDQLEFADV-IVVNK--IDAVDNKTK 245
                 5667777766665444.22333..222222222 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   8.9e-05     0.094       1      28 [.      34      66 ..      34     143 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 8.9e-05
      AAA_33  1 lvllvGlpGsGKstlaerllkklg.....avll 28
                ++ll G  GsGK+tl+e++l+ +      av++
  KHJ31152.1 34 VTLLSGFLGSGKTTLLEHILRSNEhglriAVIV 66
                67899***************9988866643333 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00011      0.12       2      27 ..      36      62 ..      35      99 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00011
  Viral_helicase1  2 vvhGvpGcGKStlirkllrts.liltv 27
                     + +G+ G+GK+tl+ ++lr++ + l++
       KHJ31152.1 36 LLSGFLGSGKTTLLEHILRSNeHGLRI 62
                     678*****************8843333 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00085       0.9       9      55 ..      42     175 ..      34     353 .. 0.71
   2 ?    1.1   0.0      0.35   3.7e+02      32      55 ..     367     471 ..     359     536 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00085
                 TSSHHHHHHHHHHHHHHTT--EEEEEEEESSCCCCHHTTEB-HHHH..................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................................................... RF
        CbiA   9 GvGKTtlaanLaralarrglrVllvDaDpqannlaileglendiep..................................................... 54 
                 G+GKTtl+ +++r+    glr++++  D  + n      + +++++                                                     
  KHJ31152.1  42 GSGKTTLLEHILRSNEH-GLRIAVIVNDMSSLNIDA---SLIQQHTvseskekliqlqngcicctlrgdlleeivrlartdtvqyvviestgisepmqv 136
                 9************8777.*******99988777543...333322233445556667777777777777777777777777777777777766666666 PP

                 ......................................C CS
                 ......................................x RF
        CbiA  55 ......................................d 55 
                                                        
  KHJ31152.1 137 aetfttefskmmieqeavdangeessilreindmgglhK 175
                 666666666666666666666666666665555554441 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.35
                 EEEEEESSCCCCHHTTEB-HHHH............................................................................ CS
                 xxxxxxxxxxxxxxxxxxxxxxx............................................................................ RF
        CbiA  32 lvDaDpqannlaileglendiep............................................................................ 54 
                 ++D+D + ++++  +g++n+ e                                                                             
  KHJ31152.1 367 MIDCDDDEKSSEKDDGDKNESEDedeemgddladkdfskeidpqiilankrnhpilsgllrskgfywlatrpyqigewsqaggmltlggggpwfctier 465
                 89*****99999777777766667667777666666666666666666666666666666666666666666666666665555555555555555555 PP

                 .....C CS
                 .....x RF
        CbiA  55 .....d 55 
                      d
  KHJ31152.1 466 dewpeD 471
                 555551 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   5.9   0.00014      0.15      77     163 ..     319     400 ..     288     416 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00014
       CDC45  77 gvevyViDshRPwnleNlfgsseekerivvfDDgdieeeleeereayealeeeeesdeedeeeeeeddddeeeeeeeeedeedeeed 163
                 g+  +V  ++RP++ + lf     +++ +v+ + d  e   +++++ +  +e+ ++d+++ +++e+dd d++e+e+e+e+  d+ +d
  KHJ31152.1 319 GISSFVYRARRPFHPKRLFDL--IHDKFIVIQNVD--EAPGDDESEDNDDQEMIDCDDDE-KSSEKDDGDKNESEDEDEEMGDDLAD 400
                 67789999***********65..458888888877..33333333345566666666444.33334444333333333333332222 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00026      0.28      23      39 ..      31      49 ..      19      54 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00026
      AAA_29 23 g..atlltGpsGsGKSTll 39
                +  +tll+G  GsGK+Tll
  KHJ31152.1 31 QlpVTLLSGFLGSGKTTLL 49
                33489*************9 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00061      0.65       2      49 ..      36      94 ..      35     144 .. 0.85
   2 ?   -1.1   0.1       2.2   2.4e+03      27      74 ..     193     244 ..     179     280 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00061
                EEESSTTSSHHHHHHHHHHH.......H....THEEEEEETTTCSSSSTTHHHHHHHHH CS
         AAA  2 llyGppGtGKTllakavake.......l....gvefleisgsellskyvgesekkirel 49
                ll+G  G GKT+l + + ++       +    +++ l+i++s + +++v+es++k+ +l
  KHJ31152.1 36 LLSGFLGSGKTTLLEHILRSnehglriAvivnDMSSLNIDASLIQQHTVSESKEKLIQL 94
                89*****************9555544313333477899999999999999999998776 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 2.2
                 EEEETTTCSSS......STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH CS
         AAA  27 leisgsellsk......yvgesekkirelfkeakekakpsilfiDEidalaksr 74 
                  +++ se+ls+      ++ e e+ i +l+ +  e a   ++++  ida+ ++ 
  KHJ31152.1 193 HNFNTSEFLSDrygkdqIIPEDERTITDLMVDQLEFA--DVIVVNKIDAVDNKT 244
                 5666666665566666677788888888876655554..788888888875554 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00038       0.4       2      44 ..      36      82 ..      36     115 .. 0.68
   2 ?   -2.8   0.2         8   8.4e+03      62      62 ..     378     378 ..     341     421 .. 0.61
   3 ?   -2.3   0.1       5.6   5.9e+03      98     121 ..     513     536 ..     488     546 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00038
      AAA_18  2 lltGtpGvGKttlakeLskrlgf....gvnlrdvakenglllevdpe 44
                ll+G  G+GKttl +++ ++++      v+++d+ + n      +++
  KHJ31152.1 36 LLSGFLGSGKTTLLEHILRSNEHglriAVIVNDMSSLNIDASLIQQH 82
                589*************9555422235566666665555555555444 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 8
      AAA_18  62 d 62 
                 +
  KHJ31152.1 378 E 378
                 1 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 5.6
      AAA_18  98 vLtaspeelleRlekRgyeeakik 121
                  Lt  + + +eR+  R+ +++++k
  KHJ31152.1 513 LLTSGEMKKWERIMSRRSQSPEQK 536
                 556666677889888888888776 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   9.1   0.00079      0.83     359     401 ..     356     398 ..     310     420 .. 0.47

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00079
       Nop14 359 ddlveseseeee.eeeeedeeeeedeeeeeeeeededdlsdles 401
                 dd++e+++++e  + +++++++e+d+ +++ e+eded+++ ++ 
  KHJ31152.1 356 DDESEDNDDQEMiDCDDDEKSSEKDDGDKN-ESEDEDEEMGDDL 398
                 112222222222111111111111111111.1111111111111 PP

>> DNA_pol_phi  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9  19.4    0.0055       5.8     640     698 ..     355     416 ..     346     424 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0055
  DNA_pol_phi 640 dededeeddeeeeeeddeededseedddeeesdedeededdedvdeid...elreklaealg 698
                  ++de+e++d++e+ + d+++++se+dd +++++ede++e  +d +++d   e++ ++  a++
   KHJ31152.1 355 GDDESEDNDDQEMIDCDDDEKSSEKDDGDKNESEDEDEEMGDDLADKDfskEIDPQIILANK 416
                  68888999999999999999999988888888888887777777776666677777666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (575 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       869  (0.048469); expected 358.6 (0.02)
Passed bias filter:                      563  (0.0314016); expected 358.6 (0.02)
Passed Vit filter:                       100  (0.00557756); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.45
# Mc/sec: 3838.74
//
Query:       KHJ31153.1  [L=467]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.45   11.4   4.5        0.6   11.0   0.2    3.0  3  Ima1_N    Ima1 N-terminal domain


Domain annotation for each model (and alignments):
>> Ima1_N  Ima1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.13   2.3e+03      81     117 ..      63      90 ..      15     100 .. 0.65
   2 ?    0.2   0.1     0.071   1.3e+03      65     105 ..     157     203 ..     118     227 .. 0.65
   3 ?   11.0   0.2   3.4e-05       0.6       5      50 ..     378     425 ..     353     456 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.13
      Ima1_N  81 Clknqelkvsklaeylpkededdpeyeekeealeeyk 117
                 C++ ++ + s+la++  +   +++e       +e+yk
  KHJ31153.1  63 CTTISSSIESTLANFKNE--IEKEE-------VEAYK 90 
                 555556666666666552..22222.......33333 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.071
      Ima1_N  65 s.....eeaessssssllCskClknqelkvsklaeylpke.deddpe 105
                         + ++++ s++ ++ +k+ ++++++ ++  p + ++ ++e
  KHJ31153.1 157 AhklpkIPQIRQDTWSTVARNGQKKARVILNNKTQVAPVNqRRVNKE 203
                 12333334566777788888999999999999999999775555555 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 3.4e-05
      Ima1_N   5 fCnkkskvkyeekns..feCpsCeayNgfdedGdindeipeqeeesln 50 
                 fC++ + ++ +++ s   +C +C ++N++++ G+ + +    ++++++
  KHJ31153.1 378 FCKRCNGHHPTKNCSraLSCGNCGSTNHLEDAGEREYQAVLRAKAAEE 425
                 676655544444433479***************987755444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3287.68
//
Query:       KHJ31154.1  [L=560]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.053   13.6   8.1        0.2   11.8   0.6    2.9  2  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.6   1.1e-05       0.2       2      17 ..     499     514 ..     498     515 .. 0.93
   2 ?    4.5   1.6    0.0022        40       2       9 ..     518     525 ..     518     525 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.1e-05
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +C nC +++H  ++C+
  KHJ31154.1 499 ACENCSSTMHSINECK 514
                 7**************7 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0022
                 CTSSSSSS CS
     zf-CCHC   2 kCynCGep 9  
                 kC+nCG+p
  KHJ31154.1 518 KCRNCGGP 525
                 7*****86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (560 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3964.44
//
Query:       KHJ31155.1  [L=165]
Description: putative 60s ribosomal protein l12 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.1e-24   83.6   0.2    9.9e-24   83.0   0.2    1.3  1  Ribosomal_L11_N  Ribosomal protein L11, N-terminal domain
    3.7e-16   59.4   0.2    6.7e-16   58.6   0.2    1.4  1  Ribosomal_L11    Ribosomal protein L11, RNA binding domain


Domain annotation for each model (and alignments):
>> Ribosomal_L11_N  Ribosomal protein L11, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.0   0.2   1.1e-27   9.9e-24       4      65 .]       9      69 ..       3      69 .. 0.96

  Alignments for each domain:
  == domain 1  score: 83.0 bits;  conditional E-value: 1.1e-27
  Ribosomal_L11_N  4 vvkvvklrvpaGkAtpaPplGpaLGplGlnikkfckefnkaTkdkkglripVkitvyqdrsf 65
                     +vkv++lr ++G+++++++l+p++GplGl++kk++++++kaT d+kglr++V++t+ q+r++
       KHJ31155.1  9 EVKVIHLRATGGEVGASSALAPKIGPLGLSPKKVGEDIAKATIDWKGLRVTVRLTI-QNRQA 69
                     89******************************************************.***96 PP

>> Ribosomal_L11  Ribosomal protein L11, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.6   0.2   7.4e-20   6.7e-16       2      70 .]      74     143 ..      73     143 .. 0.90

  Alignments for each domain:
  == domain 1  score: 58.6 bits;  conditional E-value: 7.4e-20
                    --SHHHHHHHHHTXSSXXSSTTTSXX..EEEEHHHHHHHHHHHGGGHTXS.SHHHHHHHHHHHHCTTTEEE CS
  Ribosomal_L11   2 tPptsylLkkaagiekgsgkpgketv..GtvslkqvyeIAkiKksdlnaalsleaavksilgtArsmGikV 70 
                    +P++s+l++ka++++++++k++k++    +++l++v+eIA++++ ++ ++ +l++ vk+ilgtA s+G++V
     KHJ31155.1  74 VPSASSLVIKALKEPPRDRKKEKNIKhsKSITLDEVIEIARTMRFKSLSK-DLKGGVKEILGTAFSVGCQV 143
                    7********************998446688**************544466.******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       634  (0.0353617); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1268.28
//
Query:       KHJ31156.1  [L=520]
Description: putative uv radiation resistance protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-17   62.5  11.8    4.7e-15   55.5  11.8    2.2  1  Atg14            Vacuolar sorting 38 and autophagy-related su
    3.9e-05   22.7   9.5      0.018   13.9   0.2    3.4  3  VPS38            Vacuolar protein sorting 38
  ------ inclusion threshold ------
        1.1    9.7   9.1        1.5    9.3   1.0    2.9  2  Snapin_Pallidin  Snapin/Pallidin


Domain annotation for each model (and alignments):
>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5  11.8   7.8e-19   4.7e-15      64     305 ..     227     475 ..     220     488 .. 0.64

  Alignments for each domain:
  == domain 1  score: 55.5 bits;  conditional E-value: 7.8e-19
       Atg14  64 nkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklk........kRrsdleslqneleerrkkqiaklqdaikrieqklsslsskt 154
                 n+ +++++  +++++l +++++l +++       +e + +la +  +l         kRr+d   l+ ++e+r+k + +++     + ++ +++ ++k+
  KHJ31156.1 227 NLDQSIQDALATREELAAQINNLLESRNMAEVLQAEERVTLANRYLNLErkllklslKRRKD---LKASIEARKKGIKSGIE-LQAKAADDIEDAQDKL 321
                 33444444444444444444444444444444444444444444444444455555666666...55555555444444444.3334445556666666 PP

       Atg14 155 lesrsslcselaklyglrrtsyergkwvf..skngeseesytIggiplpdlrdlnafpaeeIsasLsyiaqLlaLvshyLsirLPaeltlphscqpi.. 249
                 +  r  l   +++l g rr+  e+ + +   + +      +tI+g++lp+ + +     e++sa+L+y+a++++L+ +yLsi+LP++++  +s+  i  
  KHJ31156.1 322 MNCRKLLTNIICELRGQRRRICEELQTIYpiNPVTHKPLLFTICGLQLPN-SFFDDSDEETVSAALGYVAHIVNLLQYYLSIPLPYPISPYGSRAIIqd 419
                 66666666666666666665555544443003355667789********6.678889**************************************5588 PP

       Atg14 250 .....rplfiekslpkls.peteseflegvalLayniawLcrtqgvnsleleptqldtlenl 305
                      +++  +++ p +   + +  f  gv lL++ni wL+ +qg+++ +++ t    l nl
  KHJ31156.1 420 fisilQDK--QRTFPLYMkGAVRFRFDYGVFLLNKNIEWLAKRQGLKLIDIRQT----LPNL 475
                 88764333..566666667888889***********************665555....4443 PP

>> VPS38  Vacuolar protein sorting 38
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.1   0.0     0.006        36       7      23 ..      14      30 ..       9      44 .. 0.87
   2 !    7.7   2.8   0.00024       1.4      39     246 ..      99     294 ..      83     333 .. 0.63
   3 !   13.9   0.2     3e-06     0.018     342     389 ..     376     422 ..     369     454 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.006
                XXXXXXXXXXXXX---- CS
       VPS38  7 krrlRHvrsisinNvsl 23
                +r++RH++ i ++N+ l
  KHJ31156.1 14 NRKIRHLQGIYVRNLTL 30
                69*************97 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00024
                 ----EEEEEE-SSS.---EEEE----SSE.EEEEEEEEE---SS---EEEEEE-----------------EEEEEE--TTS--TT--EEEEEEEESSSE CS
       VPS38  39 rfvpcFiviedlkg.evlYvSEvqsgslr.klqFnelpkleealtlivlklvvkipsellkeeekkeeWcvlatykidLnkLkkidedddlieslNvPv 135
                 +    F+++    + +++Y+SE+ ++s + + +  +l+     +t +   +v        k   k++e   + + +i+L  L++i + ++     N  +
  KHJ31156.1  99 NSADTFVTLHCASQiDPIYISEIIEDSINpTFRQFDLSVFGPKITRMDTFIV--------KVWVKRKEFKLFIEEEINLKLLNYIGKLENHQCPANCIL 189
                 5556677777654416999999988776513444466777766666554333........222233345679999**********888888889***** PP

                 EEEEEEE------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S-HHHHHHH.HHHHHHHHHHHHHH CS
       VPS38 136 leliDgiytlpevklkklkestkshkrkisevkikksfsFnslLKLnklleYtsqveeElqeisekveelikseekkelwslke.lqkaieqlkksiek 233
                 ++liDgiy     ++ +     +++k  +s        s+++lL+L+ l +  ++     +e+++++++l++s +  e+++ +e ++ a+  l+ + + 
  KHJ31156.1 190 FDLIDGIYSRDL-SINY-----QKPKPGVS----LPTSSYSALLRLSNLDQSIQDALATREELAAQINNLLESRNMAEVLQAEErVTLANRYLNLERKL 278
                 ********7433.3333.....33443333....34568999999999999999999999999999999999888888777654133333333333322 PP

                 HHHHH...HHHHHHHH CS
       VPS38 234 kklkl...krLessle 246
                  kl+l   k L+ s+e
  KHJ31156.1 279 LKLSLkrrKDLKASIE 294
                 2222200133444444 PP

  == domain 3  score: 13.9 bits;  conditional E-value: 3e-06
                 HHHTTTHHHHHHTTHHHHHHHHHHHHT---SS-EE--SSS-EETTTEE CS
       VPS38 342 eedkelinsmLGYYlLFvkliatkiykipLPyklmYyGstsvidgkyp 389
                 + d e++++ LGY    v+l+ +   +ipLPy ++ yGs+++i+  + 
  KHJ31156.1 376 DSDEETVSAALGYVAHIVNLLQYY-LSIPLPYPISPYGSRAIIQDFIS 422
                 678999**************9876.69****************87554 PP

>> Snapin_Pallidin  Snapin/Pallidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   3.2     0.037   2.2e+02      15      54 ..     225     264 ..     222     284 .. 0.71
   2 ?    9.3   1.0   0.00025       1.5      28      86 ..     285     342 ..     273     344 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.037
  Snapin_Pallidin  15 ldeldeklkelrqsQeeLleqldrl..nekLkeleeaqeaev 54 
                      l +ld+++++  ++ eeL++q+++l  +++++e+ +a+e   
       KHJ31156.1 225 LSNLDQSIQDALATREELAAQINNLleSRNMAEVLQAEE--R 264
                      6789*******************9722445555555555..3 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00025
  Snapin_Pallidin  28 sQeeLleqldrlnekLkeleeaqeaevlpdlkeyakKLvnikkrmsslnerlqklkkRa 86 
                        ++L+++++  ++ +k+  e+q  ++  d++  ++KL+n++k ++++   l+  ++R+
       KHJ31156.1 285 RRKDLKASIEARKKGIKSGIELQA-KAADDIEDAQDKLMNCRKLLTNIICELRGQRRRI 342
                      55789************9999998.999*****************99987777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       872  (0.0486363); expected 358.6 (0.02)
Passed bias filter:                      590  (0.0329076); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.26s 00:00:00.91 Elapsed: 00:00:00.46
# Mc/sec: 3402.70
//
Query:       KHJ31157.1  [L=531]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-06   26.8   3.2    3.5e-06   26.8   3.2    2.9  3  zf-CCHC   Zinc knuckle
  ------ inclusion threshold ------
      0.049   13.4   0.1        0.2   11.5   0.0    2.0  2  DdrB      DdrB-like protein


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   3.2   3.9e-10   3.5e-06       2      17 ..     360     375 ..     359     376 .. 0.93
   2 ?   -3.6   0.3       1.6   1.4e+04      14      17 ..     390     393 ..     390     393 .. 0.90
   3 ?    1.3   1.1     0.046   4.1e+02       3       8 ..     400     405 ..     399     406 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 3.9e-10
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +CynC++ GH+ar+C+
  KHJ31157.1 360 QCYNCQRYGHMARNCT 375
                 7**************8 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 1.6
                 TTST CS
     zf-CCHC  14 rdCp 17 
                 r+Cp
  KHJ31157.1 390 RECP 393
                 89*9 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.046
                 TSSSSS CS
     zf-CCHC   3 CynCGe 8  
                 C nCG+
  KHJ31157.1 400 CSNCGR 405
                 *****6 PP

>> DdrB  DdrB-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0      0.78     7e+03      26      41 ..     108     123 ..      93     142 .. 0.77
   2 ?   11.5   0.0   2.2e-05       0.2      30      83 ..     420     474 ..     416     492 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.78
                 HHHHHTTT-B-S---T CS
        DdrB  26 lRevgrlgwtsnellk 41 
                 +R +++l+ ++ ++ +
  KHJ31157.1 108 QRTYKKLLTEAIQVIE 123
                 7888888888877765 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 2.2e-05
                 HTTT-B-S---TTSEEE-GGGSTTB-GGGGTEEEEEE.TTTEEEEEETTEEEEEE CS
        DdrB  30 grlgwtsnellkkgfqlpldeekdFDWsligarviss.eegeevveyrGkvykRR 83 
                  ++ +t+n++++ g  +  +  +d DW+ +g+r+ +    g +vv   G++ +RR
  KHJ31157.1 420 AKARATQNRIQDPGRFIVREAIQDDDWQIVGSRKRRVgTTGAQVVGADGEIIERR 474
                 5677899999999998999999*************99899**************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1290  (0.0719505); expected 358.6 (0.02)
Passed bias filter:                      594  (0.0331307); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3806.32
//
Query:       KHJ31158.1  [L=208]
Description: hypothetical protein EV44_g3317 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.091   12.4   0.1        0.2   11.2   0.1    1.5  2  SASA      Carbohydrate esterase, sialic acid-specific acetyle


Domain annotation for each model (and alignments):
>> SASA  Carbohydrate esterase, sialic acid-specific acetylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.14   2.5e+03      38      74 ..      11      51 ..       4      96 .. 0.50
   2 ?   11.2   0.1   1.1e-05       0.2     109     157 ..     147     196 ..     138     200 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.14
        SASA 38 lnadleweeAkePlhadidvkk....vagvgpglaFAkell 74
                ln++ +w+  ++ +  ++ + k       v    +FA++  
  KHJ31158.1 11 LNKRIQWQINNKNMGLKFVMLKqdslRLVVFTDSSFANNPD 51
                55555565555555444333110111222233344555443 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 1.1e-05
        SASA 109 krakaalkk.kikgiLWyQGEsDaekeedaeaYkekleklvedlrkdlga 157
                 + +++a ++ +i+ ++W +GEs+ ++  ++++ ++ l++++++ + dl++
  KHJ31158.1 147 SAIRQAYERrEITEVIWIKGESNVADSMTKSVGNKALNRMIATNKLDLER 196
                 56777777789****************999999*********99999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1639.21
//
Query:       KHJ31159.1  [L=911]
Description: putative peroxisomal multifunctional beta-oxidation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-89  299.2   9.6      2e-46  157.9   0.6    3.3  3  adh_short        short chain dehydrogenase
    1.7e-66  224.2   6.4    5.9e-34  117.7   0.2    3.1  3  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
    8.4e-30  104.0   3.4    5.1e-14   52.6   0.2    2.4  2  KR               KR domain
    6.3e-29  100.0   0.0    1.5e-28   98.9   0.0    1.6  1  MaoC_dehydratas  MaoC like domain
     0.0071   15.7   2.2      0.047   13.0   0.3    2.7  3  THF_DHG_CYH_C    Tetrahydrofolate dehydrogenase/cyclohydrolas
  ------ inclusion threshold ------
      0.015   14.8   1.5      0.065   12.7   0.1    2.4  2  Epimerase        NAD dependent epimerase/dehydratase family
       0.58   10.6   2.4        1.6    9.2   0.1    2.8  3  NAD_binding_7    Putative NAD(P)-binding


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.9   1.1   6.2e-45   1.6e-41       1     181 [.      14     200 ..      14     213 .. 0.85
   2 !  157.9   0.6   7.7e-50     2e-46       1     185 [.     318     496 ..     318     505 .. 0.93
   3 ?    3.0   0.0     0.023        60      21      91 ..     588     655 ..     580     678 .. 0.75

  Alignments for each domain:
  == domain 1  score: 141.9 bits;  conditional E-value: 6.2e-45
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEES.........CHHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS-- CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdr.........seekleevakelkeegakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgs 90 
                 +vv+vtGa++G+G+a+a  + ++Ga+vvv d          s++++  v++e+k+ g ka+   ++  + e+ ++++e+a++++g++d+L+nNAGi ++
  KHJ31159.1  14 QVVVVTGAGGGLGKAYALFFGSRGASVVVNDLgasfkgegaSSKAADVVVDEIKSSGGKAV---ANYDSVENGNKIIETAIQNFGRIDILINNAGILRD 109
                 69***************************87511111111133344445555555554444...45556678889************************ PP

                 SSGGGCSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS CS
   adh_short  91 gpfselseeewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGl 181
                 ++f+++s+++w+ vi+v +tg f+++ra+ p+++kq+ Gr++n++S ag+ +++g++ YsA+K a++g+t++lake a++ i+ n++aP +
  KHJ31159.1 110 VSFKNMSDRDWDLVIAVHVTGSFKCSRAAWPYFKKQKFGRVINTTSAAGLFGSFGQCNYSAAKLALVGFTETLAKEGAKYDIKANVIAPIA 200
                 ****************************************************************************************954 PP

  == domain 2  score: 157.9 bits;  conditional E-value: 7.7e-50
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGCSHH CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfselsee 99 
                 kv+l+tG+++GIGr ++ ++ak Ga+vvv d  +     v++e+k++gaka+ i++    +ee + +v++a++ +g++d+++nNAGi ++++fs+++++
  KHJ31159.1 318 KVALITGGGAGIGRSYCLAFAKYGASVVVNDLVD--PSSVVQEIKNLGAKAFGIKAS---AEEGDLVVKAAIDAFGRIDIIINNAGILRDKAFSNMDDK 411
                 89***************************88874..457*********9**999975...558889999****************************** PP

                 HHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSH CS
   adh_short 100 ewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTd 185
                  w +v++v l g++++t+a+ p+mlkq+ GrIvn++S+ g ++++g+a Y+A+K ++ g++r+la+e ++++i vn++aP +  T+
  KHJ31159.1 412 LWHDVMAVHLRGTYKVTKAAWPYMLKQKYGRIVNTTSTSGIYGNFGQANYAAAKCGILGFSRALAREGHKYNIFVNTIAPNA-GTA 496
                 *******************************************************************************964.344 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.023
                 HHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--S CS
   adh_short  21 akeGakvvvvdrseekleevakelkeegakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsg 91 
                 a++G k ++++ +++k+ +++ke  +   ka   q+  +  e+++++ e+++ ++++ d++  N Gi  ++
  KHJ31159.1 588 AQDGLKSIMANFENRKAMTAKKENSA---KAANEQILTNITESMKKTGEEIEFQYQEKDIILYNLGIGAKS 655
                 77888888877777777666666444...45555555555599************************5443 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.6   0.2   2.7e-34   6.8e-31       1     175 [.      20     202 ..      20     221 .. 0.87
   2 !  117.7   0.2   2.3e-37   5.9e-34       4     173 ..     327     493 ..     323     529 .. 0.89
   3 ?    0.2   0.1      0.17   4.4e+02      17      85 ..     590     656 ..     586     671 .. 0.64

  Alignments for each domain:
  == domain 1  score: 107.6 bits;  conditional E-value: 2.7e-34
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGH......HHHHHHHHHHTTSEE..EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGG CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneea......kkrveelaeelgaev..lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfle 89 
                   Ga  g+G+a A  + ++Ga+vv+ dl+ +        k+++ +++e++++     ++  + e+ ++++e++ ++fg++Dil+nnagi ++   +f +
    KHJ31159.1  20 GAGGGLGKAYALFFGSRGASVVVNDLGASFkgegasSKAADVVVDEIKSSGgkAVANYDSVENGNKIIETAIQNFGRIDILINNAGILRD--VSFKN 114
                   7889*********************998764211123444445555555525799999999*****************************..***** PP

                   H-HHHHHHHHHHHTHHHHHHHHHHHHHCTSC..CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BH CS
  adh_short_C2  90 tsreefdraldvnlyslfllakaalplmkeg..gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpik 175
                   +s+ ++d +++v +++ f++++aa p++k++  g+++n++s ++  +  ++  y+aaK al+++t +lA+e +++ i+ N+++p +  
    KHJ31159.1 115 MSDRDWDLVIAVHVTGSFKCSRAAWPYFKKQkfGRVINTTSAAGLFGSFGQCNYSAAKLALVGFTETLAKEGAKYDIKANVIAPIAAS 202
                   **************************999999***************************************************97655 PP

  == domain 2  score: 117.7 bits;  conditional E-value: 2.3e-37
                   TSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTTSEEEE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHHHHHHH CS
  adh_short_C2   4 sgIGraiAkalaeeGaevvltdlneeakkrveelaeelgaevlecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsreefdrald 100
                    gIGr    a+a+ Ga+vv+ dl + + + v+e+++ lga+++ + ++  e+ + +v+++ + fg++Di++nnagi ++  + f +++++ ++++++
    KHJ31159.1 327 AGIGRSYCLAFAKYGASVVVNDLVDPS-SVVQEIKN-LGAKAFGIKAS-AEEGDLVVKAAIDAFGRIDIIINNAGILRD--KAFSNMDDKLWHDVMA 418
                   69************************9.77888876.89998777665.567899************************..**************** PP

                   HHTHHHHHHHHHHHHHCTSC..CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-- CS
  adh_short_C2 101 vnlyslfllakaalplmkeg..gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgp 173
                   v l+++++++kaa p+m ++  g+ivn++s+++  +  +++ y+aaK ++ +++r+lA+e  +++i vN+++p +
    KHJ31159.1 419 VHLRGTYKVTKAAWPYMLKQkyGRIVNTTSTSGIYGNFGQANYAAAKCGILGFSRALAREGHKYNIFVNTIAPNA 493
                   ***************6655559**************************************************975 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.17
                   TT-EEEEEESSGGH.HHHHHHHHHHTTSEEEE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS CS
  adh_short_C2  17 eGaevvltdlneea.kkrveelaeelgaevlecDVtdeeqvealveevvekfgklDilvnnagiapklkg 85 
                    G + +++++++++   + +e  ++  +e + +++  +e+++++ ee++ ++++ Di++ n gi  k ++
    KHJ31159.1 590 DGLKSIMANFENRKaMTAKKENSAKAANEQILTNI--TESMKKTGEEIEFQYQEKDIILYNLGIGAK-SK 656
                   56666666666665211111222222222344555..47899999******************9998.33 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   0.4   3.8e-17   9.7e-14       3     168 ..      16     187 ..      14     197 .. 0.83
   2 !   52.6   0.2     2e-17   5.1e-14       3     162 ..     320     474 ..     319     489 .. 0.83

  Alignments for each domain:
  == domain 1  score: 51.7 bits;  conditional E-value: 3.8e-17
                 EEEETTTSHHHHHHHHHHHHHHS-EEEE.E-SS......--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE--------- CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvl.lsRsa....aadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdkl 96 
                 +++tG+ GgLG++ a +  ++ga+ +v  l+ s     a++++++  ++e++++g +  +   D  + ++ ++++e++ +++++i   i+ Ag+lrd  
  KHJ31159.1  16 VVVTGAGGGLGKAYALFFGSRGASVVVNdLGASFkgegASSKAADVVVDEIKSSGGKAVANY-D--SVENGNKIIETAIQNFGRIDILINNAGILRDVS 111
                 79*********************9998546666445555566666699*****988876544.4..4455667888899999***************** PP

                 TTT--HHHHHHHHTTTTHHHHHHHHH....TTTS--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHHHHH CS
          KR  97 leemtaedleqvlapKvkGawnLhel....ledesldffvlfSSiagllgsagqanYaaaNaflDalaeyrrsqgl 168
                 +++m++ d++ v+a  v+G+    ++    +++++   ++ ++S+agl+gs+gq+nY+aa   l ++ e+ +++g+
  KHJ31159.1 112 FKNMSDRDWDLVIAVHVTGSFKCSRAawpyFKKQKFGRVINTTSAAGLFGSFGQCNYSAAKLALVGFTETLAKEGA 187
                 *******************9988876222267799999**********************9999888888877776 PP

  == domain 2  score: 52.6 bits;  conditional E-value: 2e-17
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT-- CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleemt 101
                  litGG  g+G++ +   a+ ga+ +v          d ++ ++e+++lga+   ++a   + d    +++++ + +++i  +i+ Ag+lrdk++++m+
  KHJ31159.1 320 ALITGGGAGIGRSYCLAFAKYGASVVVND------LVDPSSVVQEIKNLGAKAFGIKASAEEGDL---VVKAAIDAFGRIDIIINNAGILRDKAFSNMD 409
                 59*********************988732......334456799999999999999876555554...4555556679********************* PP

                 HHHHHHHHTTTTHHHHHHHHHTTT....S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHH CS
          KR 102 aedleqvlapKvkGawnLhelled....esldffvlfSSiagllgsagqanYaaaNaflDalaey 162
                 ++ ++ v+a  ++G+  + ++  +    ++   +v ++S +g++g++gqanYaaa   + ++ + 
  KHJ31159.1 410 DKLWHDVMAVHLRGTYKVTKAAWPymlkQKYGRIVNTTSTSGIYGNFGQANYAAAKCGILGFSRA 474
                 ******************998766566599999**********************7655555555 PP

>> MaoC_dehydratas  MaoC like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.9   0.0   5.7e-32   1.5e-28       5     122 ..     786     897 ..     782     898 .. 0.95

  Alignments for each domain:
  == domain 1  score: 98.9 bits;  conditional E-value: 5.7e-32
                      CTTSEEEEEEEEEEEHHHHHHHHHHHT---GGGT-HHHHHHTTTSSSB--HHHHHHHHHHHHHHHHSTTEGGGEEEEEEEE-S--BTTCEEEEE CS
  MaoC_dehydratas   5 aigekvetekeitvteadialyalvsgDlnpiHvdpefAkkagfggpIahGmltlaivaklveeelgdnvvarvgeikvrFtkpVlpgdtlkve 98 
                      ++ +k++   e +++e+ +a+y+l sgD+np+H++pefA+++gf+ pI+hG++t++i+ k+v++ +g      +++ik+rF + V pg+ l +e
       KHJ31159.1 786 PPHRKPDILIEEKTSEDLAAIYRL-SGDFNPLHINPEFAAMGGFESPILHGLCTYGIAGKHVYNSYGR-----FKSIKARFSGTVTPGQILITE 873
                      67788888899999**********.*******************************************.....********************* PP

                      EEEEEEEEEEEEEEEEEEEEEEEE CS
  MaoC_dehydratas  99 levvgkrdvrktkkvevtkevtee 122
                      +++++++ ++++k++e++k ++++
       KHJ31159.1 874 MWKENNKVIFQVKVKETGKLAISN 897
                      *****************9988875 PP

>> THF_DHG_CYH_C  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.3   1.8e-05     0.047      32     127 ..       9     116 ..       2     120 .. 0.85
   2 ?    0.8   0.0       0.1   2.6e+02      31      66 ..     312     347 ..     309     361 .. 0.90
   3 ?   -4.0   0.0       3.1     8e+03      99     114 ..     732     747 ..     723     755 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.8e-05
                    ---TT-EEEEE---TTTHHHHHHHHHCTT-EEEEE-TTS..CCHHHHHCCSSEEE...E-SS-TT-B-GGGS-TT-EEEE---EEC.......-TT CS
  THF_DHG_CYH_C  32 ielegkkvvvvGrsnivgkplallLleknatVtvchskt..kdlaeitreadivv...vavGkpelikaemvkegavviDvGinrv.......ekg 115
                       +++ vvv G++  +gk+ al++ +++a V v +  +  k   +  + ad+vv    + G + + + + v++g+ +i+  i++        ++ 
     KHJ31159.1   9 LRYDNQVVVVTGAGGGLGKAYALFFGSRGASVVVNDLGAsfKGEGASSKAADVVVdeiKSSGGKAVANYDSVENGNKIIETAIQNFgridiliNNA 104
                    55677889999***********************9988755666778999****833356799999*****************9998888888888 PP

                    EEE-SB-HHHHC CS
  THF_DHG_CYH_C 116 klvGDvdfeevk 127
                     ++ Dv+f++++
     KHJ31159.1 105 GILRDVSFKNMS 116
                    888899988876 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.1
                    T---TT-EEEEE---TTTHHHHHHHHHCTT-EEEEE CS
  THF_DHG_CYH_C  31 gielegkkvvvvGrsnivgkplallLleknatVtvc 66 
                     i+l+gk +++ G +  +g++  l +++ +a V v 
     KHJ31159.1 312 AIDLKGKVALITGGGAGIGRSYCLAFAKYGASVVVN 347
                    689***********************9999999875 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 3.1
                    -TT-EEEE---EEC-T CS
  THF_DHG_CYH_C  99 kegavviDvGinrvek 114
                    k +a+v+ +G+++++k
     KHJ31159.1 732 KGNAAVVKIGTTTINK 747
                    5568899999888833 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.16   4.1e+02       1      29 [.      16      44 ..      16     108 .. 0.85
   2 ?   12.7   0.1   2.5e-05     0.065       1     123 [.     320     457 ..     320     467 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.16
                EEEETTTSHHHHHHHHHHHHCTSEEEEEE CS
   Epimerase  1 ilVtGatGfiGsalvkallekgyevigld 29
                ++VtGa G +G+a +  + ++g  v++ d
  KHJ31159.1 16 VVVTGAGGGLGKAYALFFGSRGASVVVND 44
                68*************99999999988766 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 2.5e-05
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC.........EEEE--TT-HHHHHHHHHHHT-SEEEE--S.---HHHHHHSHH...H CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl.........elveldltdrsalerlfkeeqpdavihlAa.vggvaassedpa...d 86 
                 +l+tG+   iG+  + a+++ g  v++ d    +s  +++++l         +  e+dl  ++a++++ +   +d++i+ A+   + a s+ d +   d
  KHJ31159.1 320 ALITGGGAGIGRSYCLAFAKYGASVVVNDLVDPSSVVQEIKNLgakafgikaSAEEGDLVVKAAIDAFGR---IDIIINNAGiLRDKAFSNMDDKlwhD 415
                 59********************999998888777777777777899*99999999****99999998766...9********87777776666533338 PP

                 HHHHHTHHHHHHHHHHHHHTCT....EEEEE.EEGGGGTSCS CS
   Epimerase  87 fieknlqgtlnlleaarkagvk....rllfl.sSsevYGkda 123
                 ++  +l+gt+++ +aa  + +k    r+++  s+s +YG+  
  KHJ31159.1 416 VMAVHLRGTYKVTKAAWPYMLKqkygRIVNTtSTSGIYGNFG 457
                 8899**********9985544444447777516699**9865 PP

>> NAD_binding_7  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1      0.95   2.4e+03       6      37 ..      12      44 ..       8     127 .. 0.62
   2 ?    9.2   0.1   0.00064       1.6       2      68 ..     312     382 ..     312     411 .. 0.77
   3 ?   -3.7   0.0       6.5   1.7e+04      78      93 ..     611     626 ..     575     630 .. 0.60

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.95
  NAD_binding_7  6 kgkkvlvvG.gGevAarkvrklleagakvtvva 37
                   +++ v+v G gG ++   +  + + ga v+v +
     KHJ31159.1 12 DNQVVVVTGaGGGLGKAYALFFGSRGASVVVND 44
                   566677777234455555555666777777743 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00064
  NAD_binding_7   2 fldlkgkkvlvvGgGe.vAarkvrklleagakvtv...vapevkeeleelvklaeeel..ekdlegadlviaa 68 
                    ++dlkgk  l+ GgG  ++ + +  ++++ga v+v   v+p +   ++e+ +l  + +  +++ e+ dlv+ a
     KHJ31159.1 312 AIDLKGKVALITGGGAgIGRSYCLAFAKYGASVVVndlVDPSS--VVQEIKNLGAKAFgiKASAEEGDLVVKA 382
                    589***********9659*****************88888884..3333333433333336666666666654 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 6.5
  NAD_binding_7  78 iaeaakarrilvnvad 93 
                      ++a +++il n++ 
     KHJ31159.1 611 NSAKAANEQILTNITE 626
                    2223344677777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (911 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       646  (0.036031); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.74u 0.25s 00:00:00.99 Elapsed: 00:00:00.41
# Mc/sec: 6669.03
//
Query:       KHJ31160.1  [L=410]
Description: putative sh3 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-40  137.4   0.2    3.5e-40  136.7   0.2    1.4  1  Ysc84     Las17-binding protein actin regulator
    4.3e-11   42.2   0.1    9.1e-11   41.2   0.1    1.6  1  SH3_1     SH3 domain
    1.4e-10   40.7   0.0    2.8e-10   39.7   0.0    1.4  1  SH3_2     Variant SH3 domain
      4e-09   36.2   0.0    7.9e-09   35.2   0.0    1.5  1  SH3_9     Variant SH3 domain


Domain annotation for each model (and alignments):
>> Ysc84  Las17-binding protein actin regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.7   0.2   7.9e-44   3.5e-40       2     127 ..      89     213 ..      88     214 .. 0.98

  Alignments for each domain:
  == domain 1  score: 136.7 bits;  conditional E-value: 7.9e-44
       Ysc84   2 gvgaGfqiGvdiydcvlvlntkealeaftkktrvslGgdlsvaaGpvgaggeaeaaaaaklkapvysysksrGlyaGvsldgtviterkdaNaafYgek 100
                 g+g+G qiG++ +d+v++ln+++a++++++ ++++lGg++svaaGp+g+++ea+ aa+ k+ a+++sys+++G++aGvs +g+vi+er+daN+++Yg++
  KHJ31160.1  89 GAGFGGQIGIELTDYVFILNDRAAVRTLSQMGSLTLGGNISVAAGPIGRTAEAAGAASFKSVAAIFSYSRTKGFFAGVSFEGSVIMERRDANEKLYGRR 187
                 78*********************************************************9*************************************88 PP

       Ysc84 101 gvsveqILrgevpwpaaakeLlevlka 127
                  +++ q+L+g++p+p aak+L++vlk+
  KHJ31160.1 188 -YTAYQLLNGSIPVPDAAKPLMKVLKS 213
                 .************************86 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.1     2e-14   9.1e-11       1      48 []     356     403 ..     356     403 .. 0.93

  Alignments for each domain:
  == domain 1  score: 41.2 bits;  conditional E-value: 2e-14
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSS..SEEEEEETTSTEEEEEEG CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksed..gWwkgrlkgtgkeGliPs 48 
                 iA+  ++ae++++L f+kGD+i+v + s +  +Ww+g +     +G++P+
  KHJ31160.1 356 IAIETFKAEQPGDLGFEKGDTITVTQSSGSknDWWTGINGK--NTGIFPA 403
                 57778************************9**********6..6*****6 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7   0.0   6.1e-14   2.8e-10       3      55 ..     356     407 ..     355     408 .. 0.90

  Alignments for each domain:
  == domain 1  score: 39.7 bits;  conditional E-value: 6.1e-14
                 EESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEECCCEEEEEGCGEE CS
       SH3_2   3 raiedyvgedkseLsfkkGdvikvlslgskdsdgwwegevgGrvGlfPsslve 55 
                 +aie++++e ++ L f+kGd+i v+  +s + ++ww g +g+  G+fP  +ve
  KHJ31160.1 356 IAIETFKAEQPGDLGFEKGDTITVT-QSSGSKNDWWTGINGKNTGIFPARYVE 407
                 79***********************.5555666*******9999*****9997 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.0   1.8e-12   7.9e-09       3      49 .]     359     407 ..     357     407 .. 0.89

  Alignments for each domain:
  == domain 1  score: 35.2 bits;  conditional E-value: 1.8e-12
       SH3_9   3 ypyepreddeLsLqrGDvitviee..sedgWlegsltGrtGlvPanyve 49 
                   +++ ++  L +++GD+itv +   s ++W+ g+++ +tG +Pa yve
  KHJ31160.1 359 ETFKAEQPGDLGFEKGDTITVTQSsgSKNDWWTGINGKNTGIFPARYVE 407
                 5688999999***********9664589********************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       519  (0.0289475); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2975.77
//
Query:       KHJ31161.1  [L=579]
Description: putative stromal membrane-associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-40  137.3   0.9    5.3e-40  136.1   0.9    1.6  1  ArfGap    Putative GTPase activating protein for Arf


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.1   0.9     3e-44   5.3e-40       2     115 ..      18     128 ..      17     130 .. 0.96

  Alignments for each domain:
  == domain 1  score: 136.1 bits;  conditional E-value: 3e-44
                 HHHHHHCCSCCCCB-TTT.-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG-TTCGHHH CS
      ArfGap   2 kalkellkepenkvCaDC.gakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekrskssskek 99 
                 + +k+llk ++nk+CaDC ++k+p+Was+n+gvf+Ci+Csg+Hr +g+his+v+s++ld w+de+l+ + ++gN +an+++eakl + + +    s++k
  KHJ31161.1  18 QTIKSLLKLEGNKTCADCkRNKHPRWASWNIGVFICIRCSGIHRGMGTHISRVKSVDLDAWTDEQLQSILKWGNLRANKYWEAKLATGHIP----SESK 112
                 67899*************8899***************************************************************999999....99** PP

                 HHHHHHHHHTCHTTCC CS
      ArfGap 100 reefirakYeekkfae 115
                 +e+fir+kYe+k+++ 
  KHJ31161.1 113 MENFIRTKYESKRWVL 128
                 *************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (579 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       768  (0.0428356); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 4116.00
//
Query:       KHJ31162.1  [L=146]
Description: putative methionine-r-sulfoxide reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.6e-51  171.3   0.1    8.9e-51  171.0   0.1    1.0  1  SelR             SelR domain
    0.00081   19.1   0.2      0.075   12.8   0.0    2.3  2  zinc_ribbon_10   Predicted integral membrane zinc-ribbon meta
  ------ inclusion threshold ------
      0.023   14.9   0.4      0.055   13.7   0.4    1.6  1  Yippee-Mis18     Yippee zinc-binding/DNA-binding /Mis18, cent
       0.05   13.4   0.2       0.09   12.6   0.0    1.4  2  MCM_OB           MCM OB domain
       0.12   12.4   2.4       0.33   11.0   1.1    2.1  3  DZR              Double zinc ribbon
       0.92   10.1   4.4         17    6.0   0.4    2.4  2  Zn_ribbon_recom  Recombinase zinc beta ribbon domain


Domain annotation for each model (and alignments):
>> SelR  SelR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.0   0.1     3e-54   8.9e-51       1     120 [.      11     131 ..      11     132 .. 0.98

  Alignments for each domain:
  == domain 1  score: 171.0 bits;  conditional E-value: 3e-54
                 HHHCTSHCCHHHHHHHTT-SSTTSSSTSS--.SSCEEEETTTS-EEEECCCCE-STTSSSEESS-STTTTEEEEEEECTTSEEEEEEETTCECEEEEEE CS
        SelR   1 elkkkLtpeqyevlrekgterpftgeyekek.ekGvyecavcgepLfssetkfdsgcGwpsFaeaikeeavkekkdtslgmertevvcakcdahlGhvF 98 
                 e+++ L++eq++vlr++gterpf g+y+k+  +kG+y+ca+c++pL+++++kf+sgcGwp++++ i++ av++++d+slgm+r+e+vc++c++hlGhvF
  KHJ31162.1  11 EWRAVLSNEQFRVLRKQGTERPFVGKYDKHMpDKGIYTCAGCNAPLYKASHKFKSGCGWPAYFDSIPG-AVTRHTDNSLGMSRIEIVCSNCGGHLGHVF 108
                 79**************************997699**********************************.****************************** PP

                 C.TSSSSS.SEEEEE-CCCEEEE CS
        SelR  99 e.dgpkpttgkrycinsvslkfk 120
                 + +g++++t++r+c+ns+sl+f+
  KHJ31162.1 109 KgEGYNTPTNERHCVNSISLNFS 131
                 *********************96 PP

>> zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.1      0.01        30      34      52 ..      36      54 ..      33      56 .. 0.80
   2 !   12.8   0.0   2.5e-05     0.075      13      36 ..      85     108 ..      73     118 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.01
  zinc_ribbon_10 34 lapkeeleevkyrCpkCga 52
                     + k  +++  y C+ C+a
      KHJ31162.1 36 KYDKHMPDKGIYTCAGCNA 54
                    56667788889******97 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 2.5e-05
  zinc_ribbon_10  13 detsaknryalICskChshnGlap 36 
                     d+++ ++r  ++Cs+C  h G + 
      KHJ31162.1  85 DNSLGMSRIEIVCSNCGGHLGHVF 108
                     5678899************99875 PP

>> Yippee-Mis18  Yippee zinc-binding/DNA-binding /Mis18, centromere assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.4   1.8e-05     0.055       3      83 ..      47     126 ..      45     145 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.8e-05
                   EEETTTS-EEEECCCEEEEECCCEEEES---CCCEEEECEEEETTSTTEEEEEEEETTT--EEEEEEE....ECSCCCCCCCTCE CS
  Yippee-Mis18   3 fqCkkCktilgdslqlvsegralnivvlkkvtrnvvvgkelvtdeegkctystlsCkgCnsvlGwkYk....steeelkykrglf 83 
                   + C+ C+++l  +++ + +g      +++++  +v+ ++  +       +  ++ C++C+ +lG ++k    +t+ + +++++  
    KHJ31162.1  47 YTCAGCNAPLYKASHKFKSGCG-WPAYFDSIPGAVTRHTDNSLG----MSRIEIVCSNCGGHLGHVFKgegyNTPTNERHCVNSI 126
                   6899999999999999998888.566788899999977666666....67789*************9722224555555555555 PP

>> MCM_OB  MCM OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       2.7     8e+03      32      42 ..      44      54 ..      39      62 .. 0.72
   2 ?   12.6   0.0     3e-05      0.09      15      63 ..      75     126 ..      73     142 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.7
                EEEEEETTT-. CS
      MCM_OB 32 kavfeckkcgk 42
                k  ++c  c++
  KHJ31162.1 44 KGIYTCAGCNA 54
                56678888875 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 3e-05
                 EEEEEEEEE---EEEEEEEEEEETTT-.-EE.E....S----SB-..TTT-HHH CS
      MCM_OB  15 kveGivtrasevkpklkkavfeckkcgktve.v....eleePrkCeekeCeskd 63 
                 +++G vtr ++ +  ++++ + c++cg +++ v     +++P+  +e++C ++ 
  KHJ31162.1  75 SIPGAVTRHTDNSLGMSRIEIVCSNCGGHLGhVfkgeGYNTPT--NERHCVNSI 126
                 689************************9988557775577799..667887544 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.4    0.0033        10      28      49 .]      46      68 ..      24      68 .. 0.77
   2 ?   11.0   1.1   0.00011      0.33      11      35 ..      45     101 ..      38     107 .. 0.88
   3 ?    4.6   0.2     0.011        34      13      24 ..      95     106 ..      90     125 .. 0.60

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0033
         DZR 28 edrCpsCgek.vdpearfCpeCG 49
                 ++C  C+++  ++ ++f   CG
  KHJ31162.1 46 IYTCAGCNAPlYKASHKFKSGCG 68
                57899999988888888877776 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00011
         DZR  11 darfCseCgtklkavaa................................edrCpsCg 35 
                 +  +C  C+++l ++++                                e++C++Cg
  KHJ31162.1  45 GIYTCAGCNAPLYKASHkfksgcgwpayfdsipgavtrhtdnslgmsriEIVCSNCG 101
                 5568999999999888899999999999999999**********************8 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.011
         DZR  13 rfCseCgtklka 24 
                 ++Cs+Cg +l  
  KHJ31162.1  95 IVCSNCGGHLGH 106
                 568888777754 PP

>> Zn_ribbon_recom  Recombinase zinc beta ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.4    0.0058        17       3      22 ..      44      64 ..      44      75 .. 0.78
   2 ?    5.4   0.3    0.0087        26       6      18 ..      95     109 ..      93     127 .. 0.66

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0058
  Zn_ribbon_recom  3 sGllrCgeCGspmtrrkrk.g 22
                     +G+  C+ C++p++  ++k +
       KHJ31162.1 44 KGIYTCAGCNAPLYKASHKfK 64
                     58999********99877753 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0087
  Zn_ribbon_recom   6 lrCgeCGspmtr..r 18 
                      ++C +CG+ + +  +
       KHJ31162.1  95 IVCSNCGGHLGHvfK 109
                      79******9977441 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.36u 0.27s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1121.37
//
Query:       KHJ31163.1  [L=177]
Description: putative snare protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       270  (0.0150594); expected 358.6 (0.02)
Passed bias filter:                      261  (0.0145574); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1400.09
//
Query:       KHJ31164.1  [L=258]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1347  (0.0751297); expected 358.6 (0.02)
Passed bias filter:                      721  (0.0402142); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 1874.97
//
Query:       KHJ31165.1  [L=292]
Description: putative spermidine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.5e-75  250.9   0.0    7.9e-75  250.4   0.0    1.2  1  Spermine_synth   Spermine/spermidine synthase domain
    1.1e-26   92.5   0.1    1.9e-26   91.7   0.1    1.5  1  Spermine_synt_N  Spermidine synthase tetramerisation domain
    0.00017   22.2   0.0    0.00042   21.0   0.0    1.7  2  Methyltransf_25  Methyltransferase domain
      0.005   17.6   0.2      0.072   13.8   0.0    2.4  2  Methyltransf_12  Methyltransferase domain
  ------ inclusion threshold ------
      0.014   14.6   0.0      0.023   13.9   0.0    1.2  1  DUF43            Branched-chain polyamine synthase A C-termin
      0.034   14.1   0.0      0.058   13.3   0.0    1.3  1  Methyltransf_18  Methyltransferase domain
       0.05   13.5   0.0      0.089   12.7   0.0    1.4  1  Methyltransf_30  S-adenosyl-L-methionine-dependent methyltran


Domain annotation for each model (and alignments):
>> Spermine_synth  Spermine/spermidine synthase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  250.4   0.0   3.1e-78   7.9e-75       1     186 [.      69     253 ..      69     255 .. 0.98

  Alignments for each domain:
  == domain 1  score: 250.4 bits;  conditional E-value: 3.1e-78
                     THHHHHHHHHHHHCCSSST-EEEEESSTTSHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHSHHHHTTCGGCTTEEEEESTCHHHHCTCSS-EEE CS
  Spermine_synth   1 efaykemiahvplmlhknpkevLiiGGgDGgvlrevvkhntvekitlvdiDqkvidfskkflpslaisafndarvklvlgdgfkflkayekkfdv 95 
                     efay+emi+h+++++h+ pk+vL+iGGgDGgvlrev+kh++ve++ l+diD+ vi +skk+lp +ais +++++vk+++gdgfkfl++y+++fdv
      KHJ31165.1  69 EFAYQEMITHLAMNSHPCPKKVLVIGGGDGGVLREVIKHDSVEEAILCDIDEAVIRLSKKYLPGMAIS-YQHPKVKVHIGDGFKFLNDYQNEFDV 162
                     79******************************************************************.************************** PP

                     EEEECCSTTCSSCGCSSHHHHHHHHHTEEEEEEEEEEE.EETTTCHHHHHHHHHHHHTTSSCEEEEEEEETTTSCSCEEEEEEEESSTT..T CS
  Spermine_synth  96 vivdsldpvgpaenlFskeffdllkkvlkedGviilqa.ekpelekelvinvdksgkqvfalqvepsavlvPtylsgminfvveskknlvtl 186
                     +i+ds+dp gpaenlF+k++f+ll ++lke+Gvi++q+ e+ +l++ l+++++k++++vf+ +ve++++++Pty+sg+i+f v+sk+++ +l
      KHJ31165.1 163 IITDSSDPDGPAENLFQKPYFELLFNALKEGGVITTQGsENQWLHLPLITKLKKDCREVFP-NVEYAYTTIPTYPSGQIGFLVCSKDPEQDL 253
                     **************************************9**********************.************************987665 PP

>> Spermine_synt_N  Spermidine synthase tetramerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.7   0.1   7.5e-30   1.9e-26       1      53 []      12      66 ..      12      66 .. 0.99

  Alignments for each domain:
  == domain 1  score: 91.7 bits;  conditional E-value: 7.5e-30
                     EEEEEEEE..TTEEEEEEEEEEEEEEEESSSEEEEEEETTTEEEEEETTEEEEET CS
  Spermine_synt_N  1 gWfteisd..pglalelkVekvLyeekSeyQdieifesktfGkvLvLDgvvqltE 53
                     gWf+eisd  pg+a++lkV+++L++ekSeyQd++ifes+++G+vLvLD+v+q+tE
       KHJ31165.1 12 GWFREISDmwPGQAMTLKVKNILHHEKSEYQDVLIFESTDYGTVLVLDNVIQCTE 66
                     7*****************************************************9 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       5.9   1.5e+04      60      91 ..      47      77 ..      34      80 .. 0.57
   2 !   21.0   0.0   1.6e-07   0.00042       1      72 [.      90     167 ..      90     194 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 5.9
                     SSTTTEEEEEEEST.GGGSSHHHHHHHHHHHHH CS
  Methyltransf_25 60 fedgsfDlvvssga.lhhlsdedlekalkeiar 91
                     fe+  +  v++  + +++++ +d e a++e+  
       KHJ31165.1 47 FESTDYGTVLVLDNvIQCTE-RD-EFAYQEMIT 77
                     56666666666666444433.33.455666655 PP

  == domain 2  score: 21.0 bits;  conditional E-value: 1.6e-07
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHH.....TTTTEEEEESBCCG.BSSSTTTEEEEEEES CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraee.....eglnvefvqgdaed.lpfedgsfDlvvssg 72 
                      vL +G G G +++++ k+ + ++ + +Di+e+ ++  ++ +       ++++v+++ gd  + l+  +++fD+++   
       KHJ31165.1  90 VLVIGGGDGGVLREVIKHDSVEEAILCDIDEAVIRLSKKYLPGmaisyQHPKVKVHIGDGFKfLNDYQNEFDVIITDS 167
                      899**************96689****************8886655555667*********774788999*****9843 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.28   7.1e+02      64      96 ..      39      82 ..      23      84 .. 0.63
   2 !   13.8   0.0   2.8e-05     0.072       1      71 [.      91     164 ..      91     168 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.28
  Methyltransf_12 64 g..........ssfDlvvas.nvlhhlkdirevldnirklLkpg 96
                     +            + +v+++ nv+++++  +++ +++  +L+ +
       KHJ31165.1 39 SeyqdvlifesTDYGTVLVLdNVIQCTERDEFAYQEMITHLAMN 82
                     234444555333444477777*****999999999988888765 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 2.8e-05
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklak.rennnnnnvelealdlldldgg...ssfDlvv 71 
                      L iG+G+G +lr++ ++ +  e + +Di++++i   k+ l    + +++ +v++   d ++   +   + fD+++
       KHJ31165.1  91 LVIGGGDGGVLREVIKHDSVEEAILCDIDEAVIRLSKKYLPGmAISYQHPKVKVHIGDGFKFL-NdyqNEFDVII 164
                      569**************9999************666666654234455555555555544333.24778888887 PP

>> DUF43  Branched-chain polyamine synthase A C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   9.1e-06     0.023      46     120 ..      88     167 ..      83     177 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 9.1e-06
                 -EEEEES-TT-HHHHHHHH.T--SEEEEE-S-HHHHHHHHHHHHHHT-..-...EEEE---TTS---TTTSS-BSEEEE-- CS
       DUF43  46 keilvlGdDDLtslalaLt.glpkkvvvvDiDeRlikfiervakelgl..k...ieaivyDlrkplpeelkekFdvfitDP 120
                 k++lv+G  D   l   +  +  ++ ++ DiDe +i++ ++    +++  +   +++++ D  k + ++++++Fdv+itD 
  KHJ31165.1  88 KKVLVIGGGDGGVLREVIKhDSVEEAILCDIDEAVIRLSKKYLPGMAIsyQhpkVKVHIGDGFK-FLNDYQNEFDVIITDS 167
                 78999998888888766651567888999***********986544431132236666666555.557899********96 PP

>> Methyltransf_18  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.3e-05     0.058      17      87 ..      89     164 ..      77     165 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.3e-05
  Methyltransf_18  17 rvaDiGtDHgylpiylvkegkakkviasDinegplekakeniekagl...edkievrlsdGleklk..eeevdtvv 87 
                      +v+ iG   g +  +++k++ ++++i +Di e  ++ +k+ +    +   + k++v+++dG++ l+  ++e+d+++
       KHJ31165.1  89 KVLVIGGGDGGVLREVIKHDSVEEAILCDIDEAVIRLSKKYLPGMAIsyqHPKVKVHIGDGFKFLNdyQNEFDVII 164
                      5666888888888899************************9988766333459************95344577765 PP

>> Methyltransf_30  S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.5e-05     0.089      29      88 ..     138     198 ..     116     204 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.5e-05
                      TTEEEEEEES-HHHHHHHC-T-EEEEEE-SS-TTT.SGGGCSHHHHHHHHHHEEEEEEEEE CS
  Methyltransf_30  29 eevtlklligdarealkeldekadawFlDgFsPak.nPelwseellkelarllkkkgtlat 88 
                      ++ ++k++igd  ++l+  ++++d++  D   P   + +l+++  +++l+++lk++g+++t
       KHJ31165.1 138 QHPKVKVHIGDGFKFLNDYQNEFDVIITDSSDPDGpAENLFQKPYFELLFNALKEGGVITT 198
                      56789****************************972457********************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2091.61
//
Query:       KHJ31166.1  [L=456]
Description: putative acid protease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-61  205.5   0.2    2.9e-61  204.7   0.2    1.4  1  Asp_protease     Aspartyl protease
    1.4e-23   83.3   0.3    4.1e-23   81.8   0.0    2.0  2  gag-asp_proteas  gag-polyprotein putative aspartyl protease
    2.9e-11   43.8   0.3    8.1e-11   42.4   0.1    1.9  2  Asp_protease_2   Aspartyl protease
    5.8e-08   32.4   0.2    1.2e-07   31.4   0.2    1.5  1  ubiquitin        Ubiquitin family
    1.5e-07   31.2   0.0      3e-07   30.2   0.0    1.6  1  UBA              UBA/TS-N domain
    3.7e-05   23.5   0.0    7.8e-05   22.5   0.0    1.5  1  RVP_2            Retroviral aspartyl protease
    0.00023   20.9   0.1    0.00045   20.0   0.1    1.5  1  Rad60-SLD        Ubiquitin-2 like Rad60 SUMO-like
     0.0045   16.8   0.0      0.011   15.5   0.0    1.7  1  UBA_4            UBA-like domain
     0.0048   17.2   0.0      0.016   15.5   0.0    1.9  1  RVP              Retroviral aspartyl protease
      0.008   16.6   0.4      0.041   14.4   0.1    2.2  2  RuvA_C           RuvA, C-terminal domain
  ------ inclusion threshold ------
      0.053   14.0   0.1       0.12   12.8   0.1    1.6  1  UN_NPL4          Nuclear pore localisation protein NPL4
       0.38   11.3   2.1        0.3   11.7   0.2    1.9  2  DUF2407          DUF2407 ubiquitin-like domain


Domain annotation for each model (and alignments):
>> Asp_protease  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.7   0.2   1.9e-64   2.9e-61       2     124 .]     212     334 ..     211     334 .. 0.99

  Alignments for each domain:
  == domain 1  score: 204.7 bits;  conditional E-value: 1.9e-64
  Asp_protease   2 eaveenlekalehtPeafvkvtmlyinvevngvkvkafvdsGaqksilskkcaercglmrlldtrfkgiakGvGtkkilGrvhsaevklgdlflpva 98 
                   e+v+enl++ale++Pe+f++v+mlyinvevng+kvkafvdsGaq++i+s++cae cg+mrl+d+rf+g+a+GvGt+ i+G+vhsa++k+g+l+lp++
    KHJ31166.1 212 ERVQENLQNALEYNPEVFGHVHMLYINVEVNGFKVKAFVDSGAQATIMSPSCAESCGIMRLVDKRFAGVARGVGTAAIIGKVHSAQIKIGSLHLPCS 308
                   78*********************************************************************************************** PP

  Asp_protease  99 lsvledkevdlllGldllkrhqviid 124
                   ++v+e+k+vdlllGld+lkrhq++id
    KHJ31166.1 309 FTVMEGKDVDLLLGLDMLKRHQACID 334
                   *************************8 PP

>> gag-asp_proteas  gag-polyprotein putative aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       5.3     8e+03      28      54 ..      87     113 ..      76     126 .. 0.54
   2 !   81.8   0.0   2.7e-26   4.1e-23       1      92 []     237     328 ..     237     328 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 5.3
                      HHHTTGGGGEB..TT--EE-TTSTT-E CS
  gag-asp_proteas  28 aerlglsrkedkgkvevktangeveak 54 
                      +++l+++  e      + t +g++e +
       KHJ31166.1  87 MQQLQIEDGELLAIHVLDTTSGQQENR 113
                      444444444443333344444544444 PP

  == domain 2  score: 81.8 bits;  conditional E-value: 2.7e-26
                      EEEEETTEEEEEEEETT-SS-EEEHHHHHHTTGGGGEB..TT--EE-TTST.T-EEEEEEEEEE.EETTEEEEEEEEEESSSSEEEEHHHHHH CS
  gag-asp_proteas   1 vkvkingkpvkflvDTGAsstiiseelaerlglsrkedkgkvevktangev.eakrvrldsvkiggielrnvsavvlegelddlLLGldfLkr 92 
                      ++v++ng +vk++vD+GA+ ti+s+++ae +g++r++dk+ + v+++ g++  +++v+ +++kig+++l  +s++v+eg+  dlLLGld+Lkr
       KHJ31166.1 237 INVEVNGFKVKAFVDSGAQATIMSPSCAESCGIMRLVDKRFAGVARGVGTAaIIGKVHSAQIKIGSLHLP-CSFTVMEGKDVDLLLGLDMLKR 328
                      689***********************************99999999999885779**************9.9*******************98 PP

>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       9.2   1.4e+04      27      60 ..      86     119 ..      83     121 .. 0.67
   2 !   42.4   0.1   5.4e-14   8.1e-11       1      89 [.     237     324 ..     237     325 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 9.2
  Asp_protease_2  27 laeklglkvreseltvrvsgaggevkarlvrlds 60 
                     + ++l+++  e+    ++++ +g+++ r v+  s
      KHJ31166.1  86 TMQQLQIEDGELLAIHVLDTTSGQQENRNVQSSS 119
                     5566666666666566678888888888877665 PP

  == domain 2  score: 42.4 bits;  conditional E-value: 5.4e-14
  Asp_protease_2   1 vpvtinGkpvrfllDTGasttlispelaeklgl.kvreseltvrvsgaggevkarlvrldslklggltlknvpalvldlgeeidglLGmd 89 
                     ++v++nG +v++++D+Ga++t++sp+ ae++g+ +  ++++  +++g+g +    +v+  ++k+g+l+l    ++v++ g+ +d+lLG+d
      KHJ31166.1 237 INVEVNGFKVKAFVDSGAQATIMSPSCAESCGImRLVDKRFAGVARGVGTAAIIGKVHSAQIKIGSLHL-PCSFTVME-GKDVDLLLGLD 324
                     579*****************************9655667788999999999999999999*********.59******.99*******98 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.2     8e-11   1.2e-07      11      68 ..      43     101 ..      30     104 .. 0.90

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 8e-11
                 EEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE.-TTSBHGGHTTSTTEEEEEE CS
   ubiquitin  11 itleveesdtveelKekiaekegipaeqqrLiysGkvL.edertleeygiqdgstlhlv 68 
                 ++le+++++tv+ lK+ +  +++i    q L+++G++L ++ +t+++++i+dg  l  +
  KHJ31166.1  43 LSLEISPNTTVSMLKASVYGETQISDTLQNLYHNGQLLnDETKTMQQLQIEDGELLAIH 101
                 689***********************************66779*********9877655 PP

>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0     2e-10     3e-07       6      34 ..     422     450 ..     417     453 .. 0.93

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 2e-10
                 HHHHHHTTS-HHHHHHHHHHTTTSHHHHH CS
         UBA   6 iqrLveMGFdreevveALratgnNeErAv 34 
                 +++L+++GF+r e+++AL+ +g+N+E A+
  KHJ31166.1 422 VEQLMALGFSRKEALQALEVSGGNVEIAA 450
                 9**************************97 PP

>> RVP_2  Retroviral aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   5.2e-08   7.8e-05      25     131 ..     238     343 ..     223     347 .. 0.87

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 5.2e-08
       RVP_2  25 tflvnsipatvLfdsGasHsFiskafvsklklkveaLstpllietPvgssvtakeicksveieiqgiefladlilLdlkdlDviLgmdWLsknkanidc 123
                 ++ vn+   +   dsGa    +s +++++ ++     +    +   vg   ++ ++ +s +i+i + +++    +++ kd+D++Lg+d L +++a id 
  KHJ31166.1 238 NVEVNGFKVKAFVDSGAQATIMSPSCAESCGIMRLVDKRFAGVARGVGTAAIIGKV-HSAQIKIGSLHLPCSFTVMEGKDVDLLLGLDMLKRHQACIDL 335
                 5678899999999****************999877666667788888888776665.789**************************************9 PP

       RVP_2 124 aekkvtlt 131
                  ++ ++++
  KHJ31166.1 336 SQNMLIIQ 343
                 99887765 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.1     3e-07   0.00045      10      68 ..      40     100 ..      29     103 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 3e-07
                 S--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--.TTSBGGGSS--TTEE..E CS
   Rad60-SLD  10 gkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLd.pnstvedldiedgdt..i 68 
                 ++ ++++++p+ttvs L+     + +i+  + ++L+ +G+ L+ +++t+++l+iedg++  i
  KHJ31166.1  40 NDLLSLEISPNTTVSMLKASVYGETQISD-TLQNLYHNGQLLNdETKTMQQLQIEDGELlaI 100
                 556889***********************.************72579**********99444 PP

>> UBA_4  UBA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   7.4e-06     0.011      12      37 ..     429     454 ..     420     456 .] 0.88

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 7.4e-06
       UBA_4  12 GadeekArqlLeannWdLerAislyF 37 
                 G+++ +A q Le++++++e+A+ l F
  KHJ31166.1 429 GFSRKEALQALEVSGGNVEIAAGLLF 454
                 89*******************98766 PP

>> RVP  Retroviral aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.1e-05     0.016       7      98 ..     237     331 ..     234     334 .. 0.66

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.1e-05
                 EEEEETTEEEEEEE-TTBSSEEEES---SCE....EEEEEEEETTEEEEEEEEEEE..EEEETTEEEEE..EEEESTTSSSE.EE-HHHHCCCT- CS
         RVP   7 lkvkiggkyieallDtGAdatviseedwPenwpvkkaetllqGiggatevqqskai..evllieekfrgevsplilpalpvn.ilGrdlLqqlgv 98 
                 ++v ++g +++a +D+GA+at++s +        + +++ + G+  +  ++ +  +    +++    + + s+ ++ +  v+ +lG d+L+  ++
  KHJ31166.1 237 INVEVNGFKVKAFVDSGAQATIMSPSCAESCGIMRLVDKRFAGVARGVGTAAIIGKvhSAQIKIGSLHLPCSFTVMEGKDVDlLLGLDMLKRHQA 331
                 78999******************988766654458888888888887765554332002223333334444555555555557888888887665 PP

>> RuvA_C  RuvA, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       1.8   2.6e+03      30      41 ..     200     211 ..     187     211 .. 0.72
   2 !   14.4   0.1   2.7e-05     0.041      10      25 ..     425     440 ..     419     451 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 1.8
                 -TTS-HHHHHHH CS
      RuvA_C  30 npgasveelIra 41 
                 +++a +ee+Ir+
  KHJ31166.1 200 EAQAKIEEIIRE 211
                 4567799**997 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 2.7e-05
                 HHHCTS-HHHHHHHHH CS
      RuvA_C  10 LlaLGYkekeaekAva 25 
                 L+aLG+++kea +A++
  KHJ31166.1 425 LMALGFSRKEALQALE 440
                 9*************97 PP

>> UN_NPL4  Nuclear pore localisation protein NPL4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   8.4e-05      0.12      18      75 ..      45      98 ..      42     105 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 8.4e-05
                EEE-TTSBHHHHHHHHHHHSS-STTT-EEESSTTCGCCCSSSSSSCCCTCH--TT-EE CS
     UN_NPL4 18 ieisekstlktllekvaeelkfsengfslylernkttelvssssksvkevglkhGdml 75
                +eis++ t+++l+ +v  e ++s+  ++ly +    ++l  ++ k++++++++ G++l
  KHJ31166.1 45 LEISPNTTVSMLKASVYGETQISDTLQNLYHN----GQLLNDETKTMQQLQIEDGELL 98
                699**************************965....5566799999999***999988 PP

>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2    0.0002       0.3      13      72 ..      41     110 ..      28     144 .. 0.75
   2 ?   -2.9   0.1       6.7   9.9e+03      81      81 ..     177     177 ..     146     204 .. 0.50

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.0002
     DUF2407  13 D.leLdipdpntttvagLkqliRerlpaelasrrLrLIyaGrlLedttslasslklpees.............v 72 
                 D l+L+i+   +ttv+ Lk  +  +   ++++    L ++G+lL+d+t+  ++l+++                +
  KHJ31166.1  41 DlLSLEIS--PNTTVSMLKASVYGET--QISDTLQNLYHNGQLLNDETKTMQQLQIEDGEllaihvldttsgqQ 110
                 55778888..6799********9988..888888899******************9966666655554443321 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 6.7
     DUF2407  81 e 81 
                 +
  KHJ31166.1 177 Q 177
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       811  (0.045234); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3378.54
//
Query:       KHJ31167.1  [L=288]
Description: putative bel1-like homeodomain protein 8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 2145.72
//
Query:       KHJ31168.1  [L=935]
Description: hypothetical protein EV44_g3299 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-06   27.4   0.1    1.5e-05   25.2   0.1    2.2  2  rve              Integrase core domain
    8.7e-06   25.5   1.7    3.1e-05   23.7   1.7    1.9  1  gag_pre-integrs  GAG-pre-integrase domain
  ------ inclusion threshold ------
       0.01   15.9   1.9      0.043   13.9   1.7    2.3  2  Integrase_H2C2   Integrase zinc binding domain
      0.013   15.7   1.3      0.021   15.0   0.3    1.8  2  CAF20            Cap associated factor
      0.023   14.0   0.8      0.075   12.3   0.0    2.1  3  Transposase_21   Transposase family tnp2


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.1   4.1e-09   1.5e-05       5     117 ..     580     685 ..     576     686 .. 0.91
   2 ?   -4.0   0.0       4.6   1.6e+04      71      91 ..     818     838 ..     811     845 .. 0.78

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 4.1e-09
         rve   5 gelwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpq 103
                 ++ + +Dv +++      ++ +l vvd ++ +  a  l+++++++++  l ++ ++ + g  p++++ D g+ +t k+f++ +  + i+ ++++    +
  KHJ31168.1 580 NSCVYIDVLYID------EKPVLQVVDEATCFQAARWLKSMNAQEAWNSLRNCWIDVYLGP-PDVIVHDAGTNFTGKEFKQSAIAMSITTKVAPTEAHH 671
                 667778888888......47899******************88889999999999999998.************************************* PP

         rve 104 dnGkvErfhrtlkd 117
                 + G+vEr h  l++
  KHJ31168.1 672 SVGLVERYHTPLRR 685
                 *********99886 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 4.6
         rve  71 lsDngseytskafrefladlg 91 
                 +sD++++++s +++ + +dl+
  KHJ31168.1 818 VSDHMPTFRSTSVKPYYSDLN 838
                 799999999988776666665 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   1.7   8.6e-09   3.1e-05      20      64 ..     514     561 ..     496     563 .. 0.74

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 8.6e-09
  gag_pre-integrs  20 nkssinlWHrRLGHpsfsrlkkLfkkgllpglkisk....sevCeaCql 64 
                      +++++++ H+R+GHps +rl+k+ ++ + + ++ +      ++C++Cq+
       KHJ31168.1 514 TDTELRRLHHRFGHPSTDRLTKILSR-SGHDFNRQAikhlTKFCDSCQK 561
                      689999****************9983.3333332222234789****96 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.7   6.2e+03      24      43 ..     254     273 ..     253     275 .. 0.85
   2 ?   13.9   1.7   1.2e-05     0.043       5      57 ..     513     564 ..     509     565 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.7
  Integrase_H2C2  24 ktlerlrrryyWpgmrkdvk 43 
                     ktl++  r+y  p +r+  +
      KHJ31168.1 254 KTLRLTGRKYTGPEIRQFLN 273
                     99*********999998665 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 1.2e-05
  Integrase_H2C2   5 lrkeilkeaHdsagHlGiektlerlrrryyWpgmrkdvkkyvksCetCqrrkp 57 
                     l+ + l+++H   gH+++++ ++ l+r  +  + r+ +k+  k C++Cq++ +
      KHJ31168.1 513 LTDTELRRLHHRFGHPSTDRLTKILSRSGHDFN-RQAIKHLTKFCDSCQKYSK 564
                     556668999999***************999988.***************9875 PP

>> CAF20  Cap associated factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.3   5.8e-06     0.021      23      99 ..     154     246 ..     141     263 .. 0.77
   2 ?   -2.9   0.0       1.8   6.6e+03      25      50 ..     750     777 ..     742     783 .. 0.59

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 5.8e-06
       CAF20  23 leaFnaliekvke.......lqaekeeakkwknG....ehgnersyhhlnrRRsSrsaa....kkPklkkkka.vkvDedGwstlekkkkasf 99 
                 +++F+ali + +        +q+ ++ a    nG     + ++r+yh  +r  +S sa+     k k+ kk+  v   e  wst ++++++  
  KHJ31168.1 154 AKTFQALISQLRTsislslkVQKSQQTAYYTANGyendSFYTDRQYHGQKRSQTSSSANnkeqSKTKFGKKACfVCSKEGCWSTRHSPEERMK 246
                 57899999999999999977666666666666777776999*******999999988764666677888887767777777***998887643 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.8
       CAF20  25 aFnaliekvkelqaeke..eakkwknGe 50 
                 a +a +++v++++a+++  +a k++nG 
  KHJ31168.1 750 AIKAAMKEVRKIRAKEQvrNALKMRNGP 777
                 5566667777744433311467888884 PP

>> Transposase_21  Transposase family tnp2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.1e-05     0.075      92     175 ..     104     189 ..     100     220 .. 0.76
   2 ?   -0.7   0.1      0.19     7e+02     151     179 ..     210     239 ..     180     275 .. 0.53
   3 ?   -4.0   0.0         2   7.2e+03      97     119 ..     301     323 ..     301     344 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.1e-05
  Transposase_21  92 lePlvddlkelweeGvetyd.alkeekfnlravllwtindfPalstlsGlstkgklacvtCkknteslrl..kngkklcylghrrfl 175
                     l+ l+ ++++l++ G+ ty+ +++++ f+lr  ll + ++ P  s+   l +k+++a +   + + sl+l  +++++++y + + + 
      KHJ31168.1 104 LDELIREIQRLYR-GLPTYNrTSESKDFELRNKLLAACEEDPDCSMACMLPAKTFQALISQLRTSISLSLkvQKSQQTAYYTANGYE 189
                     6779********9.*****93567899******************************998877766665511577888887766663 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.19
  Transposase_21 151 Ckknteslrlkngkklcylghrr.fleanh 179
                       +n e+ + k+gkk c++  +    +++h
      KHJ31168.1 210 SANNKEQSKTKFGKKACFVCSKEgCWSTRH 239
                     344556667778888888876642233333 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 2
  Transposase_21  97 ddlkelweeGvetydalkeekfn 119
                     ddl++++++G+   d+++e++++
      KHJ31168.1 301 DDLEDFFRTGIFFTDSQTETTLE 323
                     79999999999999999987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (935 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       723  (0.0403257); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.70u 0.27s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 6505.83
//
Query:       KHJ31169.1  [L=1744]
Description: putative ras gtpase activating [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-50  170.5   0.2    1.3e-49  168.7   0.2    2.0  1  RasGAP    GTPase-activator protein for Ras-like GTPase
    9.1e-49  165.1   2.5      4e-48  163.0   2.5    2.3  1  RasGAP_C  RasGAP C-terminus
    5.2e-12   45.9   0.1    2.1e-11   43.9   0.0    2.2  2  CH        Calponin homology (CH) domain
    8.3e-10   37.6  51.3        1.3    9.0   0.0   16.0 18  IQ        IQ calmodulin-binding motif


Domain annotation for each model (and alignments):
>> RasGAP  GTPase-activator protein for Ras-like GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.7   0.2   2.9e-53   1.3e-49       2     207 ..    1116    1322 ..    1115    1323 .. 0.98

  Alignments for each domain:
  == domain 1  score: 168.7 bits;  conditional E-value: 2.9e-53
      RasGAP    2 iseliklElessenpndllrsnsvvsklleeytkrpegqeyLkkilkpllqkil.ekedlnlelDPrkiyeelkkkkesktgkksessgkksekeas 97  
                  +++  k+E++s+ ++++ lr+n +++++l++yt++p+ +++L+++l+p++q  +  ++ l+le+DP++iy ++++++e +tg+ s++++++++++a+
  KHJ31169.1 1116 MTRSAKEEVDSAVSIKESLRGNFIWTRILANYTRSPRDRRFLRELLGPFIQASIiGDPTLDLESDPMQIYCSAISNEELRTGQASHRPIDITREQAI 1212
                  567889*********************************************9877****************************************** PP

      RasGAP   98 elekvsqmleknldkLkelvneildsIfksleqlPvgiRiickqirekvkekfpdaseeeilnligsflflrfliPaivnPklfglvdkqiseeqrr 194 
                  +++++++ ++++l++L+e+v+ +l s+ + ++++P+giR++c+qi + + ++f ++ ++ +l+ +g++l+  +l Pa+++P+  g++++q+++ q+r
  KHJ31169.1 1213 KDTETRELFINHLRDLREIVDDFLLSLESLVNKMPYGIRFVCQQIFQALFQRFSSEPQQLLLQTVGNWLWKFYLQPALLAPEVTGIIERQMTPLQKR 1309
                  *****************************************************99999999************************************ PP

      RasGAP  195 nLtliaKllqnla 207 
                  nL++iaK+l +++
  KHJ31169.1 1310 NLSEIAKVLNQIS 1322
                  ***********97 PP

>> RasGAP_C  RasGAP C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.0   2.5     9e-52     4e-48       1     137 []    1524    1663 ..    1524    1663 .. 0.98

  Alignments for each domain:
  == domain 1  score: 163.0 bits;  conditional E-value: 9e-52
    RasGAP_C    1 lvelkkkalenlkeLeelgvisrennyqellneIakdirnkgrlrekrkeElesleetlktLseknnylesqlesYkayienvleqlkkkkgk...l 94  
                  +++lk++alen+++Le+lg+isr+n yq++ln+Ia dir+k+r+r +r +Ele ++ tl++L+ek + lesq +sY++yie+++ +l+kk +k   +
  KHJ31169.1 1524 YKDLKRTALENVLKLEQLGRISRQNFYQDILNAIALDIRTKSRRRVQRHRELEGVRLTLANLNEKADWLESQRKSYDNYIEQAMITLQKKGKKrflM 1620
                  889***************************************************************************************7668*** PP

    RasGAP_C   95 pfskqyfkkrelkksgklpkfgsykysakqLeekgVLleiegl 137 
                  pfskqy ++rel++sg++pkfgs+kysa+ L +kgVL++++g+
  KHJ31169.1 1621 PFSKQYNHERELERSGRKPKFGSFKYSAHTLFDKGVLVSWKGY 1663
                  ****************************************985 PP

>> CH  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.9   0.0   4.8e-15   2.1e-11       6     105 ..     269     368 ..     265     372 .. 0.89
   2 ?   -3.6   0.1       2.8   1.2e+04      87     103 ..    1718    1734 ..    1713    1739 .. 0.72

  Alignments for each domain:
  == domain 1  score: 43.9 bits;  conditional E-value: 4.8e-15
                 HHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT...HHHHHHHHHHHHHHHHHHTTCHTTSS.-HHHHHTTSHH.HHHHH CS
          CH   6 ellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnks...efkkleNinlaldvaekklgvpkvli.eaedlvegknk.svltl 99 
                 e+ +Wi++ l++++p +   ++ee+lrDGv L++++ +l+p++  k ++ +    ++++ +Ni+ ++ +++ ++ +p++   e +dl+e+kn+ +v+ +
  KHJ31169.1 269 EAKEWIEKLLQRSIPPI--VQLEEALRDGVTLAEIVVALKPDK--KIRIFRHpklQYRHSDNIAIFFRFLA-DVELPDLFRfELTDLYEKKNTpKVIYC 362
                 5789******9976655..7*********************99..4444333679****************.*************************** PP

                 HHHHHH CS
          CH 100 laqLfr 105
                 +++L++
  KHJ31169.1 363 IHALSW 368
                 ***987 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 2.8
                  HHHTTSHHHHHHHHHHH CS
          CH   87 dlvegknksvltllaqL 103 
                  dl+eg+ +++++l+++L
  KHJ31169.1 1718 DLFEGNMRLNVNLFLHL 1734
                  88888888777776666 PP

>> IQ  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1         1   4.5e+03       7      17 ..     452     462 ..     449     465 .. 0.82
   2 ?    0.3   0.0      0.19   8.4e+02       5      13 ..     480     488 ..     476     494 .. 0.77
   3 !    8.5   0.3   0.00044         2       5      19 ..     506     520 ..     502     521 .. 0.84
   4 ?   -0.2   0.0      0.26   1.2e+03       5      19 ..     536     550 ..     533     552 .. 0.89
   5 !    9.0   0.0   0.00029       1.3       7      19 ..     568     580 ..     563     582 .. 0.88
   6 !    5.3   0.3    0.0047        21       3      18 ..     594     609 ..     592     611 .. 0.87
   7 !    5.3   0.1    0.0045        20       4      19 ..     625     640 ..     622     642 .. 0.88
   8 !    5.5   0.4    0.0039        18       5      20 ..     656     671 ..     656     672 .. 0.89
   9 ?   -0.0   0.0      0.23     1e+03       6      16 ..     687     697 ..     686     699 .. 0.77
  10 !    4.3   0.4    0.0092        41       5      20 ..     716     731 ..     713     732 .. 0.91
  11 ?   -0.2   0.0      0.27   1.2e+03       6      20 ..     747     761 ..     746     762 .. 0.89
  12 ?    1.0   0.0      0.11   4.8e+02       6      19 ..     777     790 ..     773     792 .. 0.86
  13 !    8.4   0.0   0.00046       2.1       3      19 ..     804     820 ..     802     821 .. 0.86
  14 ?    1.7   0.2     0.066     3e+02       7      17 ..     838     848 ..     836     852 .. 0.85
  15 ?    3.9   0.0     0.013        58       4      19 ..     865     880 ..     864     882 .. 0.90
  16 ?   -1.6   0.0      0.76   3.4e+03       2      11 ..     893     902 ..     892     911 .. 0.76
  17 !    6.0   0.0    0.0026        12       3      16 ..     924     937 ..     922     942 .. 0.81
  18 ?   -2.5   0.1       1.4   6.4e+03       2       9 ..    1605    1612 ..    1604    1613 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1
                 HHHHHHHHHHH CS
          IQ   7 IQaawRGylaR 17 
                 +Qa+ RG + R
  KHJ31169.1 452 LQAQARGAMNR 462
                 7******7776 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.19
                 HHHHHHHHH CS
          IQ   5 ikIQaawRG 13 
                 i +Q+ +RG
  KHJ31169.1 480 IYLQSIIRG 488
                 889*****9 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00044
                 HHHHHHHHHHHHHHH CS
          IQ   5 ikIQaawRGylaRkr 19 
                 + +Q+ +RG+l+R r
  KHJ31169.1 506 TSLQSIVRGFLTRHR 520
                 779**********87 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.26
                 HHHHHHHHHHHHHHH CS
          IQ   5 ikIQaawRGylaRkr 19 
                 i++Q  +R   +R +
  KHJ31169.1 536 ITLQNLIRSKTVRSK 550
                 89********99987 PP

  == domain 5  score: 9.0 bits;  conditional E-value: 0.00029
                 HHHHHHHHHHHHH CS
          IQ   7 IQaawRGylaRkr 19 
                 +Qa++RG+l R+ 
  KHJ31169.1 568 LQAQIRGFLIRRS 580
                 9**********96 PP

  == domain 6  score: 5.3 bits;  conditional E-value: 0.0047
                 HHHHHHHHHHHHHHHH CS
          IQ   3 aaikIQaawRGylaRk 18 
                 ++  +Qaa+RG+  R+
  KHJ31169.1 594 SISYLQAAIRGMSSRR 609
                 67789*******9998 PP

  == domain 7  score: 5.3 bits;  conditional E-value: 0.0045
                 HHHHHHHHHHHHHHHH CS
          IQ   4 aikIQaawRGylaRkr 19 
                 + +IQa  R+  +R++
  KHJ31169.1 625 IKTIQASARAVIVRRN 640
                 789***********98 PP

  == domain 8  score: 5.5 bits;  conditional E-value: 0.0039
                 HHHHHHHHHHHHHHHH CS
          IQ   5 ikIQaawRGylaRkry 20 
                 i IQ+  RG + R+++
  KHJ31169.1 656 ISIQSILRGNQSRQQC 671
                 67***********997 PP

  == domain 9  score: -0.0 bits;  conditional E-value: 0.23
                 HHHHHHHHHHH CS
          IQ   6 kIQaawRGyla 16 
                  +Q+++RG   
  KHJ31169.1 687 SFQSVFRGAHS 697
                 68*****9655 PP

  == domain 10  score: 4.3 bits;  conditional E-value: 0.0092
                 HHHHHHHHHHHHHHHH CS
          IQ   5 ikIQaawRGylaRkry 20 
                 +k+Q+  RG + R ++
  KHJ31169.1 716 VKLQSISRGNRYRLHH 731
                 79***********987 PP

  == domain 11  score: -0.2 bits;  conditional E-value: 0.27
                 HHHHHHHHHHHHHHH CS
          IQ   6 kIQaawRGylaRkry 20 
                  +Q+  R+   R +y
  KHJ31169.1 747 NLQSILRAKNSRLKY 761
                 69**********998 PP

  == domain 12  score: 1.0 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHHHH CS
          IQ   6 kIQaawRGylaRkr 19 
                  +Q+ +R+   R+ 
  KHJ31169.1 777 NLQSIIRANFLRCD 790
                 69*******99986 PP

  == domain 13  score: 8.4 bits;  conditional E-value: 0.00046
                 HHHHHHHHHHHHHHHHH CS
          IQ   3 aaikIQaawRGylaRkr 19 
                 ++  IQ+ +RG++ R++
  KHJ31169.1 804 SISEIQSLIRGMVLRRK 820
                 6667***********97 PP

  == domain 14  score: 1.7 bits;  conditional E-value: 0.066
                 HHHHHHHHHHH CS
          IQ   7 IQaawRGylaR 17 
                 +Q+  RG+l R
  KHJ31169.1 838 FQSLARGFLKR 848
                 7********88 PP

  == domain 15  score: 3.9 bits;  conditional E-value: 0.013
                 HHHHHHHHHHHHHHHH CS
          IQ   4 aikIQaawRGylaRkr 19 
                 + k+Qa+ R++  R++
  KHJ31169.1 865 IKKLQAVSRAMIFRRE 880
                 579***********98 PP

  == domain 16  score: -1.6 bits;  conditional E-value: 0.76
                 HHHHHHHHHH CS
          IQ   2 kaaikIQaaw 11 
                 +++i +Qaa 
  KHJ31169.1 893 DSIIMFQAAA 902
                 79*****986 PP

  == domain 17  score: 6.0 bits;  conditional E-value: 0.0026
                 HHHHHHHHHHHHHH CS
          IQ   3 aaikIQaawRGyla 16 
                  ++kIQ+++R  l+
  KHJ31169.1 924 KVVKIQSFVRSRLQ 937
                 689*******9987 PP

  == domain 18  score: -2.5 bits;  conditional E-value: 1.4
                  HHHHHHHH CS
          IQ    2 kaaikIQa 9   
                  +a+i++Q+
  KHJ31169.1 1605 QAMITLQK 1612
                  79*****7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1744 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       729  (0.0406604); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.91u 0.25s 00:00:01.16 Elapsed: 00:00:00.43
# Mc/sec: 12203.45
//
Query:       KHJ31170.1  [L=375]
Description: hypothetical protein EV44_g1525 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-14   53.0   0.0    5.3e-14   52.4   0.0    1.2  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
      0.032   14.2   0.1        2.6    8.1   0.0    2.5  2  BLACT_WH  Beta-lactamase associated winged helix domain


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.4   0.0   5.9e-18   5.3e-14      11     219 ..      94     318 ..      85     331 .. 0.76

  Alignments for each domain:
  == domain 1  score: 52.4 bits;  conditional E-value: 5.9e-18
       RVT_2  11 drkaigsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaae....eelvvhqldvdsafLnaeldee..vyvkqPpGf 103
                 d +   sr+v  +k+d+  +   k+rlv+qG+      +   + +P i+  s rL+ a+a +     +  ++  d+  a++++ ++ +  +y k P   
  KHJ31170.1  94 DIRFFKSRFVREIKHDSGGKPYEKSRLVIQGYGDEEKREIL-TQSPTIQRASQRLMFAIAPTimkiLNADIYLRDITQAYVQSAMKLNrtIYAKLPKEL 191
                 567778999*****999999999**********99888876.789**************97621114566999*********98865445********* PP

       RVT_2 104 eidreeekvykLnkslyGlkqapllWneki.dkvLkklgferseaesGlyvrgtg...egk..livalyvddlli.agsdikiledvkke...lakkfk 192
                 +    ++ ++++ k lyG+  ++l W e+  ++ L+++ +  s+    l v  +    +++   i+a+  dd li a+s+ + le++k     + +k k
  KHJ31170.1 192 IPKYAPGTIMRVIKPLYGIAESGLFWWETYhHHHLEEMAMMTSTFDPCLLVTDFKkvpNDEcfGIIAMQTDDTLIlATSKFNDLEEMKLAkanFMAKPK 290
                 ************************99877615689999999999999997755431113333469*******776145556677777654011334444 PP

       RVT_2 193 lkdlgkvs.kfLGieiaqeaggiklsla 219
                  k  ++ + +f G  ++ ++g++++ ++
  KHJ31170.1 291 TKLTTNQKlQFNGCTLIISNGTLTIRQN 318
                 4433332226788888888888888775 PP

>> BLACT_WH  Beta-lactamase associated winged helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.009        81      31      43 ..      51      63 ..      50      68 .. 0.87
   2 ?    8.1   0.0   0.00029       2.6       1      19 [.     175     193 ..     175     194 .. 0.92

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.009
    BLACT_WH 31 KLeeeGkVkregd 43
                KL++eGk++ +g+
  KHJ31170.1 51 KLRAEGKIADVGE 63
                9*******99885 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00029
    BLACT_WH   1 TveelVkviYkdvpeslhp 19 
                 ++++l  +iY+++p++l p
  KHJ31170.1 175 SAMKLNRTIYAKLPKELIP 193
                 6899************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2775.48
//
Query:       KHJ31171.1  [L=922]
Description: putative dipeptidyl aminopeptidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   3.8e-116  387.7   0.7   5.9e-116  387.1   0.7    1.3  1  DPPIV_N        Dipeptidyl peptidase IV (DPP IV) N-terminal re
    4.9e-57  192.8   0.7    9.2e-57  191.9   0.7    1.4  1  Peptidase_S9   Prolyl oligopeptidase family
      1e-07   31.8   1.0    9.7e-07   28.6   0.3    2.2  2  Peptidase_S15  X-Pro dipeptidyl-peptidase (S15 family)
     0.0027   18.3   0.0      0.064   13.9   0.0    2.2  2  Abhydrolase_6  Alpha/beta hydrolase family
     0.0035   17.2   0.0       0.64    9.8   0.0    2.7  3  Abhydrolase_2  Phospholipase/Carboxylesterase
     0.0055   15.4   0.2      0.026   13.2   0.0    2.1  2  AXE1           Acetyl xylan esterase (AXE1)
  ------ inclusion threshold ------
      0.029   14.5   0.0      0.067   13.3   0.0    1.5  1  DNA_binding_1  6-O-methylguanine DNA methyltransferase, DNA b
      0.034   13.7   0.0       0.14   11.6   0.0    1.8  1  DLH            Dienelactone hydrolase family
      0.041   13.5   0.2       0.19   11.3   0.1    2.0  2  Abhydrolase_1  alpha/beta hydrolase fold
      0.042   12.4   0.0       0.55    8.7   0.0    2.2  2  PAF-AH_p_II    Platelet-activating factor acetylhydrolase, is
      0.054   13.1   0.0       0.27   10.8   0.0    2.0  1  Esterase       Putative esterase
      0.074   13.0   0.0        1.2    9.0   0.0    2.2  2  BAAT_C         BAAT / Acyl-CoA thioester hydrolase C terminal


Domain annotation for each model (and alignments):
>> DPPIV_N  Dipeptidyl peptidase IV (DPP IV) N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  387.1   0.7    4e-119  5.9e-116       1     354 []     246     621 ..     246     621 .. 0.98

  Alignments for each domain:
  == domain 1  score: 387.1 bits;  conditional E-value: 4e-119
                 TTTSSEEEEEECEEEESSSEETTEEEEEETTTEECEEEETT..TT.BSEEEEESSTTEEEEEETTEEEEESTTTSEEEECES-STTTEEESB--HHHHH CS
     DPPIV_N   1 spdgkflllatnaeknwRhsytaeyyiydletneveelspg..eeklqlakwSPagdklafvrnnnLyvrelatgkeiqlTsdgsagifnGvadWvyeE 97 
                 s+d+k++l+atn+++nwRhs+ a+y+i+d+e++++e+l p   ++ +qla wSP++++++f+rnnnL++r+++++k++q+T+dgs ++f+Gv+dWvyeE
  KHJ31171.1 246 SKDLKKVLVATNSQQNWRHSFLAKYWIFDVESQTAEALDPAepNKSIQLASWSPQSNAIVFTRNNNLFLRNISSSKVVQITTDGSPDLFYGVPDWVYEE 344
                 789************************************9999******************************************************** PP

                 HTSSSSBEEEE-TTSSEEEEEEEECTTS-EEEEEESSSSC-.........SS-EEEEEE--BTTS---EEEEEEEECTTSCEEECS-HHHHCTTCEEEE CS
     DPPIV_N  98 EvlgsnsavwWspdgsrlaylrfdeseVpeitlpsytdees.........qypevksikYPkaGsknpkVelkvvdlasgktvevqlpdslsekdeyit 187
                 Ev++ nsa+wW++dg+++a+lr++es Vpe+++++y +++          +ypev++ikYPkaG++np V+l+++d+++g++++v +p+s+ + d +it
  KHJ31171.1 345 EVFSGNSATWWAEDGKYIAFLRTNESLVPEFPIQYYVSKSGkakpspgeeNYPEVREIKYPKAGAPNPIVDLQFYDIEKGEVFQVHTPGSFPPHDLLIT 443
                 **************************************9999********************************************************* PP

                 EEEECTTSCCEEEEEEETTSTEEEEEEEETTTCCEEEEE....EEESSS-SSS-S-EEE-......TTTSSEEEEEEETTSSEEEEEEESSS-C.EEES CS
     DPPIV_N 188 rvkWtsdeksllvqwlnRsqnrlkvvlvdaetgravvkl....eetsdgWvelhdevhfl......krdesgflwisekdGfkHLylfdldgkseikql 276
                 +v W+ ++ ++l+++ nR+++ lk+ l+d+ +++ +++     +et +gW+e+++++++l      +r e+g+++++  ++++H+ +f+  ++ +++ l
  KHJ31171.1 444 EVVWAGSTGKVLIRESNRESDMLKILLIDVLSRTGRIVRtenlQETGQGWLEVTEQTKYLpkdplsGRHEDGYIDTIIVNNYNHIGYFTPLDNPNPIVL 542
                 ****999999******************997766666666689******************************************************** PP

                 S-SSS-EEE.EEEEETTTTEEEEEESSSETTEBEEEEEESSCTTEEEESSTTTSEE.EEEEE-TTSSEEEEEEESSSSSE CS
     DPPIV_N 277 TsGeweVts.ilavdekrdlvyFtatkdsPlerhlYsvslesggeltrltdeegdh.ysasfspsgkyyvlkysgpdtpp 354
                 TsGeweV++ + avd k++lvyF atk+sP++rh+Ysv+l+ g el+ ltd + ++ y+asfs+   +++l+y+gpd+p+
  KHJ31171.1 543 TSGEWEVENaPSAVDLKNNLVYFVATKESPIQRHIYSVKLD-GSELKPLTDISREGyYDASFSSGTTFALLSYNGPDIPW 621
                 *******999*******************************.*************************************8 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.9   0.7   6.2e-60   9.2e-57       2     211 ..     704     909 ..     702     910 .. 0.97

  Alignments for each domain:
  == domain 1  score: 191.9 bits;  conditional E-value: 6.2e-60
                   ---HHHHHHHCCT-EEEEE--TTSSTTHCHHHHTTSGGGGHHHHHHHHHHHHHHHHTTS--GGGEEEEEETHHHHHHHHHHH.H-GGG-SEEEEESE CS
  Peptidase_S9   2 sfsselqlladrGyvvvvanirGsggyGeafhdagkrklgqnefdDfiaaaealakegyvdserlaitGgSyGGyltgaaln.qrpdlFkaavaevp 97 
                   s++++++++a++Gy+vv +++rG+g  G++ +  ++++lg +e++D+i+aa+ +a+++yvds+r+ai+G+SyGG++t+ +l+ +++++F++++a++p
    KHJ31171.1 704 SVDFQTYVAANLGYIVVTVDGRGTGFIGRKARIIVRGNLGYYEAHDQIEAAKLWASKEYVDSSRIAIWGWSYGGFMTLKTLEkDAGKTFSYGMAVAP 800
                   4568999***************************************************************************9************** PP

                   ---CCCHHCSTTSTHHHCCCC--TTTCHHHHHHHHHH-CGGG-----EEEEEEETT-SSS-THHHHHHHHHHH--S-S.EEEEEETTS-SSTTSSHH CS
  Peptidase_S9  98 vvdvlrydsdtdllteeymewgnpeeneegykelspyspldnvkaypplLlihGlaDdrvppaealklvaaLqkkgkn.vlllifpdegHgvgkpra 193
                   v++++ yds    +te+ym ++ +  n+ gy + s++s+++++++++++L++hG+aDd+v+++++lkl++ L+ +g + ++++ifpd++H ++ ++a
    KHJ31171.1 801 VTNWRFYDSI---YTERYMRTPIN--NPIGY-KNSSISNVTALRQNVRFLIMHGTADDNVHLQNTLKLIDMLDLAGIEnYDVQIFPDSNHAINFHNA 891
                   **********...*******8876..*****.9**************************************************************** PP

                   HHHHHHHHHHHHHHHCT- CS
  Peptidase_S9 194 kveelarllaFlkealgk 211
                   +   +++l ++l +a++ 
    KHJ31171.1 892 NHIIYHKLNNWLINAFNG 909
                   *************99985 PP

>> Peptidase_S15  X-Pro dipeptidyl-peptidase (S15 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.3   6.5e-10   9.7e-07       1     123 [.     664     788 ..     664     819 .. 0.78
   2 ?    1.6   0.0      0.11   1.7e+02     205     256 ..     815     869 ..     807     894 .. 0.68

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 6.5e-10
                    TS-EEEEEEEEE...TTSSSEEEEEEEESS-.CCT.CCCCHTTCHHCCHGGGHHHHHTT-EEEEEE-TTSTTS-S---TT.....TTTHHHHHHHH CS
  Peptidase_S15   1 DGvrLavdiyrP.etkskeklPvlltrtPYg.kndelasdkalaleelelqdkvfvarGYavVvqdvrGtggSeGeftvg.....dsdeaedgadv 89 
                    DGv L+v   rP   ++k+k+Pvl++   Yg       s+  + + +++ q  v ++ GY+vV +d+rGtg    +  +      ++ ea d  ++
     KHJ31171.1 664 DGVDLQVVERRPpSFSEKKKYPVLFHL--YGgP----GSQTVTKKFSVDFQTYVAANLGYIVVTVDGRGTGFIGRKARIIvrgnlGYYEAHDQIEA 753
                    9************99*********985..8832....33333344445566777999*************99888877778899988899988887 PP

                    HH.HHHHCTTEEEEEEEEEECHHHHHHHHHCTT-- CS
  Peptidase_S15  90 id.WlakqpwsnGkVgmtGiSYlGttqllaaatgv 123
                     + W+ k+   + +++ +G SY+G++ l  ++++ 
     KHJ31171.1 754 AKlWASKEYVDSSRIAIWGWSYGGFMTLKTLEKDA 788
                    765***********************998887543 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.11
                    CCC--SSSHHHHTT-HHHHH..CT--S-EEEEEECCSSTTC.CHHHHHHHHHCCT CS
  Peptidase_S15 205 lletgdydafWkdrnlseda..dkvkapvllvgGwnDwnvk.ngaiklyealkap 256
                    +++t+ +++   + +  +++   + ++  l+++G +D+nv  ++++kl + l  +
     KHJ31171.1 815 YMRTPINNPIGYKNSSISNVtaLRQNVRFLIMHGTADDNVHlQNTLKLIDMLDLA 869
                    55555566655555555555334556889***********999999987766655 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   4.3e-05     0.064      16     102 ..     712     804 ..     686     824 .. 0.61
   2 ?    1.9   0.0      0.19   2.9e+02     164     214 ..     835     890 ..     805     893 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.3e-05
                    HHHHHHHHCCTCEEEEE--TTST........S-GGCS--HHHCHHH..HHHHCCTT.....TTSEEEEEETCHHHHHHHHHHCC.........EEE CS
  Abhydrolase_6  16 vapLaallaagvhvlapDlpGhG........rsdpppldledladl..aalldelaa...gggpvvlvGHSlGGalalaaapla.......lvvgv 91 
                    +a+L      g+ v+++D +G+G           +  l++ +++d+  aa      +   +  ++ ++G+S+GG++ l     +       +  g 
     KHJ31171.1 712 AANL------GYIVVTVDGRGTGfigrkariI-VRGNLGYYEAHDQieAA-KLWASKeyvDSSRIAIWGWSYGGFMTLK---TLekdagktFSYGM 796
                    2233......45569*******8554443320.44448888877777433.22222247799999**********9999...33332465444447 PP

                    EES-..----T CS
  Abhydrolase_6  92 lldppptalpa 102
                    +++p   ++ +
     KHJ31171.1 797 AVAP---VTNW 804
                    7777...5555 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.19
                    CHHTT-TTGCEEECTT-CHHH........HCHHCCCHSTTEEETCE...SSS-HHHHSH CS
  Abhydrolase_6 164 aawadlpvpllvlggeDplvp........rllerllaqagarlpvvlpgaGHlphleep 214
                    +a+++    l+++g++D+ v+        ++l+ ++ ++ +++ +++p++ H++++ ++
     KHJ31171.1 835 TALRQNVRFLIMHGTADDNVHlqntlkliDMLDLAG-IENYDV-QIFPDSNHAINF-HN 890
                    455555555544489999666223333333344333.377777.********9988.65 PP

>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       2.6   3.9e+03     112     150 ..     603     641 ..     602     650 .. 0.81
   2 !    9.8   0.0   0.00043      0.64      99     125 ..     760     786 ..     747     806 .. 0.79
   3 ?    4.2   0.0     0.023        34     148     204 ..     832     889 ..     810     902 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2.6
                    ETHHHHHHHHHHHT-SS--SEEEEES---TTGGGTTTTS CS
  Abhydrolase_2 112 FSqGaalalylaltlpkklggivafsgalplsqklessa 150
                    FS G+  al +      + +++++ +g l+   +l +  
     KHJ31171.1 603 FSSGTTFALLSYNGPDIPWQRVISTNGNLAKYDNLIEDN 641
                    999*****999999999999****999998776665554 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00043
                    HTT--GGGEEEEEETHHHHHHHHHHHT CS
  Abhydrolase_2  99 kkgipssriiigGFSqGaalalylalt 125
                    k+ ++ssri+i G S G+ ++l++  +
     KHJ31171.1 760 KEYVDSSRIAIWGWSYGGFMTLKTLEK 786
                    3449******************98655 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.023
                    TTS-GGGGG-EEEEEEETT-SSS-HHHHHHHHHHHHTTS-.GEEEEEETT--SS--HH CS
  Abhydrolase_2 148 ssatavtkklpilqiHgeeDpvvplalgkaakevlkkllk.kvelksyeglaHsidee 204
                    s+ ta+ +++  l +Hg+ D  v l+   ++  +l  +   +++ ++++++ H+i  +
     KHJ31171.1 832 SNVTALRQNVRFLIMHGTADDNVHLQNTLKLIDMLDLAGIeNYDVQIFPDSNHAINFH 889
                    45677778999999*****************9999988877************99755 PP

>> AXE1  Acetyl xylan esterase (AXE1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   1.8e-05     0.026     109     190 ..     716     782 ..     621     794 .. 0.69
   2 ?   -3.1   0.0       1.6   2.4e+03     228     263 ..     842     877 ..     833     879 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.8e-05
                 T-EEEEEE-TTTS..SSB-SSCCSS-SSSSTTTTTTSTTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHH CS
        AXE1 109 GyavvvmdvRGqggesedkvgskgnkakGfiirGlldkeklyyrrvflDavrlveivaslpevDeeRvavlGasqGGalala 190
                 Gy+vv++d RG g        + g +    i+rG l     yy     D ++++++ as + vD +R+a+ G+s GG ++l 
  KHJ31171.1 716 GYIVVTVDGRGTG--------FIG-RKARIIVRGNL----GYYEA--HDQIEAAKLWASKEYVDSSRIAIWGWSYGGFMTLK 782
                 5555555555554........221.11223455533....34543..5999**************************99985 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.6
                 HHHHHSH-CCHHHHHHHHHHTT-HHHHHCC--S-EE CS
        AXE1 228 rylkldperekeeevletLsYiDvknlAkrvkaevl 263
                 r+l ++ + + + ++ +tL  iD+ +lA   + +v+
  KHJ31171.1 842 RFLIMHGTADDNVHLQNTLKLIDMLDLAGIENYDVQ 877
                 66777777788888999**********998877775 PP

>> DNA_binding_1  6-O-methylguanine DNA methyltransferase, DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   4.5e-05     0.067      48      73 ..     617     642 ..     610     650 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 4.5e-05
                    TTSGGGGEEBTTSBCCTTTTCHHHHH CS
  DNA_binding_1  48 ilvPcHRVvgadgklggyagglerkr 73 
                    +++P++RV++++g+l +y + +e   
     KHJ31171.1 617 PDIPWQRVISTNGNLAKYDNLIEDNS 642
                    79****************87666555 PP

>> DLH  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   9.7e-05      0.14      82     197 ..     751     896 ..     741     903 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 9.7e-05
         DLH  82 lkaavaylksvpevstkkvgvvGfCmGGalalllaaevpevdaavafYG...............................lspekeleeaakikapila 149
                 +  a + ++s+++v+++++++ G+  GG ++l+   ++   ++    YG                               ++ +     a + ++  l+
  KHJ31171.1 751 I-EAAKLWASKEYVDSSRIAIWGWSYGGFMTLKTLEKD---AGKTFSYGmavapvtnwrfydsiyterymrtpinnpigyKNSSISNVTALRQNVRFLI 845
                 3.56678888899********************99999...355556888899999999999**********999999653333333444555667799 PP

         DLH 150 lfgeeDefipadevekleealkaanv.dlelkvYpgagHa..Fandsresy 197
                 ++g++D  +  +++ kl   l  a++ +++++++p+  Ha  F+n+++  y
  KHJ31171.1 846 MHGTADDNVHLQNTLKLIDMLDLAGIeNYDVQIFPDSNHAinFHNANHIIY 896
                 99********9999999999988886379**********966666666555 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00013      0.19       2      93 ..     686     786 ..     685     803 .. 0.81
   2 ?   -0.8   0.0      0.64   9.5e+02     206     255 ..     825     889 ..     793     891 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00013
                    EEEEE-STTT........CGGGGTTGHHHHHHHHTTSEEEEEEETTSTTSSSTTTGB.....CHHSHHHHHHHHH.HH.HHHCTTSSEEEEEETHH CS
  Abhydrolase_1   2 vlvilhGlpg........ssdvwaerglapaLakdgfdvillDlrGvgySspapacin....ddygtasvaddld.ri.ldalgddkltlvGhSmG 83 
                    vl  l G+pg        s d +    +a +L   g+ v+++D rG g+  +  + i+      y+  +  +  + ++ ++  +  +++++G+S+G
     KHJ31171.1 686 VLFHLYGGPGsqtvtkkfSVDFQTY--VAANL---GYIVVTVDGRGTGFIGRKARIIVrgnlGYYEAHDQIEAAKlWAsKEYVDSSRIAIWGWSYG 776
                    6666789999665544444444444..55444...**************999999999988877888888888889888***************** PP

                    HHHHHHHHHH CS
  Abhydrolase_1  84 Gmialayaae 93 
                    G++ l  +++
     KHJ31171.1 777 GFMTLKTLEK 786
                    **99987776 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.64
                    C.....THHHHS.....EEEEEEETTCSSSCH.HHHHHHHHC....HTSEEEEEEETCSSSHHHH CS
  Abhydrolase_1 206 e.....lknvla.....ptlvisgtsDplvpp.kaledlaql....lpkkrlvvisdagHlafle 255
                    +     ++nv+a       l+++gt D  v   + l  ++ l    + +  + +++d+ H +++ 
     KHJ31171.1 825 GyknssISNVTAlrqnvRFLIMHGTADDNVHLqNTLKLIDMLdlagIENYDVQIFPDSNHAINFH 889
                    25555766677777788999999988888888455555555598888889999999999999885 PP

>> PAF-AH_p_II  Platelet-activating factor acetylhydrolase, isoform II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.078   1.2e+02      93     136 ..     677     725 ..     639     730 .. 0.71
   2 ?    8.7   0.0   0.00037      0.55     222     257 ..     760     797 ..     746     849 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.078
                  -B--SS-EEEEEEE--TT--TTTTHHHHHHH.....HHTT-EEEEE--- CS
  PAF-AH_p_II  93 llktkekyPlivFsHGLgafRtlYsalciel.....AskGfvvaavEHr 136
                   ++ k+kyP++    G  ++ t+   +++++     A  G++v++v+ r
   KHJ31171.1 677 SFSEKKKYPVLFHLYGGPGSQTVTKKFSVDFqtyvaANLGYIVVTVDGR 725
                  5888999****************98888775333335669999999866 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00037
                  TT-EEEEEEEEEEETHHHHHHHHHHHH-..TTS-EEEE CS
  PAF-AH_p_II 222 KdnldtskvaviGHsFGgAtvikslsed..teFrcaia 257
                  K+ +d s++a+ G s+Gg  ++k+l +d  + F  ++a
   KHJ31171.1 760 KEYVDSSRIAIWGWSYGGFMTLKTLEKDagKTFSYGMA 797
                  899************************97767776665 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00018      0.27     105     205 ..     756     862 ..     665     874 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00018
                 HHHHHCSEECCCEEEEEETHHHHHHHHHHHC.STTTCCEEEEES--S-CC...............HCHHHCTTCCHHHCC-CCCCHCHHCHTTSEEEEE CS
    Esterase 105 lldanfrtapdgravaGqSmGGlgALilalk.hpdrFgsvssfSpivnps...............namWgqeekeawqendpvllakelsaslkalriy 187
                 l +++  +++++ a++G S GG++ L +  k + + F++ ++ +p+ n +               n ++g        +n +++++    a ++++r +
  KHJ31171.1 756 LWASKEYVDSSRIAIWGWSYGGFMTLKTLEKdAGKTFSYGMAVAPVTNWRfydsiyterymrtpiNNPIGY-------KNSSISNV---TALRQNVRFL 844
                 4444445555559***************999899************9999999999988887777777777.......78888888...6788888999 PP

                 EEECTTBCCCHTSCHHHH CS
    Esterase 188 ldvGtseddlgeqlsvei 205
                 +  Gt +d+++ q+  + 
  KHJ31171.1 845 IMHGTADDNVHLQNTLKL 862
                 999999998887776655 PP

>> BAAT_C  BAAT / Acyl-CoA thioester hydrolase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.18   2.7e+02       9      37 ..     753     781 ..     742     783 .. 0.85
   2 ?    9.0   0.0   0.00081       1.2      90     170 ..     815     893 ..     796     911 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.18
                 HHHHHHCSTTB--SSEEEEEETHHHHHHH CS
      BAAT_C   9 ainyllrhpkvkkdkigllGiSkGgelal 37 
                 a++   ++++v  ++i++ G S Gg ++l
  KHJ31171.1 753 AAKLWASKEYVDSSRIAIWGWSYGGFMTL 781
                 5666678889***************9886 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00081
                 EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT--.--EEEEETTB-S---STT--- CS
      BAAT_C  90 ldivdvlallkeklaekalipvekakgpillvvgedDknwpSkesaekaserLkkagkkvevqlltYpkaGHliepPyfpl 170
                 ++++ + + +  k+++ + + + + +  +l++ g+ D n+  ++   k++++L  ag + ++ + ++p++ H+i++    +
  KHJ31171.1 815 YMRTPINNPIGYKNSSISNVTALRQNVRFLIMHGTADDNVHLQNTL-KLIDMLDLAGIE-NYDVQIFPDSNHAINFHNANH 893
                 5566666777777777788888899****************99988.8899********.**************9876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (922 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       490  (0.02733); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.76u 0.29s 00:00:01.05 Elapsed: 00:00:00.45
# Mc/sec: 6196.38
//
Query:       KHJ31172.1  [L=246]
Description: hypothetical protein EV44_g4110 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.023   14.9   0.1       0.22   11.7   0.1    2.3  1  RNase_H   RNase H


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   1.2e-05      0.22       4      33 ..      77     111 ..      74     233 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.2e-05
                 EEEEEEEEEECT..TTCEEEEEEE.CTT...E.EE CS
     RNase_H   4 vvvYtDGsclgn..pgeggagavl.ykeg.ar.ni 33 
                 ++v+tDGs  +n  + ++++g+v+   ++ +r ni
  KHJ31172.1  77 IIVFTDGSFANNkeNMTSQIGYVIcLADDkNRaNI 111
                 79******999965556699995534343322333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1822.14
//
Query:       KHJ31173.1  [L=574]
Description: hypothetical protein EV44_g6445 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-06   27.8   0.0    3.1e-06   26.6   0.0    1.6  1  WHIM1     WSTF, HB1, Itc1p, MBD9 motif 1
  ------ inclusion threshold ------
       0.21   11.2   1.6       0.52    9.9   1.6    1.6  1  SCHIP-1   Schwannomin-interacting protein 1


Domain annotation for each model (and alignments):
>> WHIM1  WSTF, HB1, Itc1p, MBD9 motif 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   3.4e-10   3.1e-06       4      45 ..     147     189 ..     145     198 .. 0.82

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 3.4e-10
                 -GGG-CCCCCSTCCCS-HHHHHHHHHHHHHHHCCC.-CCHHHH CS
       WHIM1   4 dpllpdeLakggYyeLspeeklkiLkiLcdlllss.savReei 45 
                 +++ ++  +  ++++++pe++l++L++L+ ++lss + ++ +i
  KHJ31173.1 147 WQNKTPLSKGATFSSMTPEQRLTLLRTLILWALSSsETLKGII 189
                 556666666667***********************76666655 PP

>> SCHIP-1  Schwannomin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.6   5.8e-05      0.52      29      98 ..     486     555 ..     470     566 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 5.8e-05
     SCHIP-1  29 sksrkpslqsrlqsGvnLqiCfvnesssdkdsdaedse.tetsldtPksdpsskqssslsdrkleeedses 98 
                  +   +sl+s  ++GvnLq+ ++ e s  +     +   ++  + tP ++ ++k+  s + +k + ++s++
  KHJ31173.1 486 VRLPVQSLKSDKKTGVNLQLSLMKEVSKTTACAVTKYGnNKKCSGTPSASHINKTPCSTELTK-NFNNSDN 555
                 4555679*******************9999988777664677788999876666666655444.2234443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 4330.60
//
Query:       KHJ31174.1  [L=187]
Description: putative duf1770 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-12   47.9   1.0    5.4e-12   46.5   1.0    1.7  1  DUF1770   Fungal protein of unknown function (DUF1770)
  ------ inclusion threshold ------
      0.025   14.5   0.0      0.035   14.1   0.0    1.2  1  HbrB      HbrB-like
      0.067   13.4   0.4       0.11   12.7   0.4    1.3  1  ColG_sub  Collagenase G catalytic helper subdomain


Domain annotation for each model (and alignments):
>> DUF1770  Fungal protein of unknown function (DUF1770)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.5   1.0   9.1e-16   5.4e-12      39      99 .]      36     108 ..       6     108 .. 0.64

  Alignments for each domain:
  == domain 1  score: 46.5 bits;  conditional E-value: 9.1e-16
     DUF1770  39 k...........ddesldskeeddeedeipysvirpvsr.....rqtlpPlPDLRFeqSYLkSiakAdtwwkvaliT 99 
                 +            +    s ++d+ee+e +y+ +r   +     r++  PlPDLRFeqSY +Sia+A+t+ ++ liT
  KHJ31174.1  36 TsrkspclssfaMEG---SYSSDEEEKEENYRFLRHS-KytwnrRSKPNPLPDLRFEQSYRNSIADAKTVGNIILIT 108
                 022223332221222...4445666677788888873.22444377888***************************9 PP

>> HbrB  HbrB-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   5.8e-06     0.035     133     166 ..      62     119 ..      16     121 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 5.8e-06
        HbrB 133 s........................sstssssksserldvrrllLiaFRDsvvlPiye 166
                 +                         ++s+ ++  +   v +++Li+ RD+v+lP+++
  KHJ31174.1  62 NyrflrhskytwnrrskpnplpdlrFEQSYRNSIADAKTVGNIILITIRDQVILPLLQ 119
                 133344444455555566778888744667777888899****************986 PP

>> ColG_sub  Collagenase G catalytic helper subdomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.4   1.8e-05      0.11      12      60 ..      13      61 ..       2      72 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.8e-05
                ----HHHHHHHHHHHHT--S-EEEEEE-SSEEEEEEEEEEEESS---HH CS
    ColG_sub 12 eeksleeikseiedvaklkdvkikkeksqffktftlrgtytggkskGes 60
                ++ ++e+ +s i+++++ ++++++ +ks   ++f ++g y  ++ + e+
  KHJ31174.1 13 DNEEIENSHSPIDKIMEAEKTTTTSRKSPCLSSFAMEGSYSSDEEEKEE 61
                45566777889*****************************999877554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1521.00
//
Query:       KHJ31175.1  [L=226]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   12.4   0.0        0.2   11.7   0.0    1.3  1  DUF2096   Uncharacterized protein conserved in archaea (DUF20


Domain annotation for each model (and alignments):
>> DUF2096  Uncharacterized protein conserved in archaea (DUF2096)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.1e-05       0.2      35     118 ..      33     119 ..      24     125 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.1e-05
     DUF2096  35 tiinfYkldphapdlikelkkaekelneiqeaLldlaekvdeeyakkwldkl....kkasrgekvleepkkkskFivevprgfetirv 118
                 +i++  k++p++   +  ++ ++  l+  +  L +l  k++  + +++l  l     +a+rge v+   ++ sk +++ p+ + + +v
  KHJ31175.1  33 NIVDQNKSSPQETSAAPLMAAIKGLLDMTNDYLQNLD-KENPGIGADFLALLadgaSRAMRGERVYAILHNTSKLNTNSPKATRAQKV 119
                 5667778888888888999999999999999999998.5555555666655555559************************9888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       502  (0.0279993); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1822.22
//
Query:       KHJ31176.1  [L=300]
Description: putative nad nadp-dependent indole-3-acetaldehyde reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-42  145.8   0.0    2.8e-41  141.6   0.0    2.0  1  Aldo_ket_red  Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.6   0.0   1.6e-45   2.8e-41       3     292 ..      28     280 ..      27     282 .. 0.95

  Alignments for each domain:
  == domain 1  score: 141.6 bits;  conditional E-value: 1.6e-45
                   EEE-SSS-ST..TS-HHHHHHHHHHHHHTT--EEE--TT-TTTHHHHHHHHHHHH-TTTGGG-EEEEEE--SSSTTSSSS-HHHHHHHHHHHHHHHT CS
  Aldo_ket_red   3 glGtwqlgsk.eeiskeealellrraleaGinffDtAevYgkgqseellGealkksrkkreeviiatKvdlrdaeiksglskeniresleeslkrLg 98 
                   glGt++++s+ ++  + e ++l+ +a++aG+ ++D AevY    +e++lG a+++++++re+++++tK+        sg + +n +++++ slk+Lg
    KHJ31176.1  28 GLGTARYKSDpSAPVDTELVNLVVKAIKAGYYHLDGAEVY---GNERELGDAIAQAGVPREKLFVTTKI--------SGTKVQNTQAAFDLSLKKLG 113
                   89*********9999999**********************...9*************************........******************** PP

                   -S-EEEEEE-S--TTS-...HHHHHHHHHHHHHTTSEEEEEEES--HHHHHHHHHTTT--EEEEE-B-BTT-HHHHTTHHHHHHHTT-EEEEBSTTG CS
  Aldo_ket_red  99 tdyvDllllHrpdpslp..sieevldaleelvkeGkiraiGvSnfsveqlekakkkkkvkivavqveynllreleeegllelckkkgvpliaysplg 193
                   ++yvD +l+H p ++    ++   ++ le  + +G +++iGvSnf  + le ++k++k++++++q+ey+++  l++ +l+++ +k g+++ ay+pl 
    KHJ31176.1 114 LEYVDQYLIHAPYFAKTesDLQQKWADLEAIYTSGRAKSIGVSNFLQKDLEVILKTAKIRPAINQIEYHPY--LQHGELIPFHRKFGIATSAYGPLT 208
                   **************9998899999***********************************************..***********************9 PP

                   GGTTGTTTSS---SSSCCC-------TS-HHHHHHHHHHHHHHHHTT--HHHHHHHHHTTSTT-SEEEE--SSHHHHHHHHGGGG----HHHHHHHH CS
  Aldo_ket_red 194 gGlltgkyqseedkedkeprkdlkrdertsknldaaeelselakehgvslaqlalryalsqpavgivipgasnieqlednldalelklseeevaeld 290
                             +++++                   ++++++elak+++v++ ++alr+++  +++++++  + + e+l++  +  ++kl++ee++ + 
    KHJ31176.1 209 A--VV-----KAKPG------------------PLDSIYDELAKKYNVTPGEIALRWVV--DQGVVALTTSGKEERLKQYQKISQFKLTTEEISLIT 278
                   2..22.....22333..................789***********************..9********************************999 PP

                   HH CS
  Aldo_ket_red 291 el 292
                   e+
    KHJ31176.1 279 EI 280
                   97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       466  (0.0259914); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2118.67
//
Query:       KHJ31177.1  [L=496]
Description: putative fmn-dependent dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.6e-120  402.3   0.0   2.1e-120  402.0   0.0    1.1  1  FMN_dh        FMN-dependent dehydrogenase
    8.7e-23   80.3   0.0    1.8e-22   79.3   0.0    1.5  1  Cyt-b5        Cytochrome b5-like Heme/Steroid binding domain
    4.8e-07   29.2   0.0    9.8e-07   28.2   0.0    1.4  1  Glu_synthase  Conserved region in glutamate synthase
    0.00016   20.8   0.1     0.0003   19.9   0.1    1.4  1  IMPDH         IMP dehydrogenase / GMP reductase domain
    0.00044   19.7   0.0    0.00062   19.3   0.0    1.3  1  NMO           Nitronate monooxygenase
     0.0049   16.3   0.2      0.079   12.4   0.1    2.3  2  His_biosynth  Histidine biosynthesis protein
  ------ inclusion threshold ------
      0.097   12.0   0.0        1.3    8.3   0.0    2.3  2  ThiG          Thiazole biosynthesis protein ThiG
       0.16   11.4   0.0          9    5.7   0.0    2.6  2  G3P_antiterm  Glycerol-3-phosphate responsive antiterminator


Domain annotation for each model (and alignments):
>> FMN_dh  FMN-dependent dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  402.0   0.0  9.2e-124  2.1e-120       1     346 [.     120     460 ..     120     462 .. 0.93

  Alignments for each domain:
  == domain 1  score: 402.0 bits;  conditional E-value: 9.2e-124
                 HHCCS-HHHHHHHH--STTSHHHHHHHHGGGGEEE---SSSS-SS-B--EEETTEEESSSEEE--BSTGGGTSTTHHHHHHHHHHHHTS-EEEETT-SS CS
      FMN_dh   1 ArkrlpkkafayvaggagdevtlrenraaferirlrprvlrdvskvdlsttllGqklslPvliaPvglaklahpdgelalaraaakagipfvlstvast 99 
                 A+  l+++a+ay+++ga+de+t+ren+aaf+ri +rprvl dv+kvd s t+lG+k+++P +i +++l kl +p+ge++l+raa+k+++++++ t+ s+
  KHJ31177.1 120 ASGVLKRNAWAYYSSGADDETTMRENNAAFRRIWFRPRVLIDVEKVDCSSTMLGHKVDMPYYITATALGKLGNPEGEVILTRAAKKHNVIQMIPTLGSC 218
                 567899********************************************************************************************* PP

                 -HHHHHHHHT..T-EEEEEE-CSSHHHHHHHHHHHHHCTESEEEEESSTSS---BHHHHHCT-.-BSTT-T.G.TTGGGSTSGSCCTTH..THHHHHHC CS
      FMN_dh 100 sleevaaaae..gplwfqlyvpkdrelteellkraeaagykalvltvDtpvlgkRerdlrngf.slppklklrnllqelakpewaaealkkasaaaefv 195
                 sl+e+ +aa+  + +w qlyv+kdr+lt++++++ae+ g+k l++tvD+p lg+Re+d+r++f ++ pk++   +    ++ ++a+          + +
  KHJ31177.1 219 SLDEILDAADssQVQWLQLYVNKDRALTKRIVQHAEKRGCKGLFITVDAPQLGRREKDMRSKFtNARPKIT---IDTRIDTSQGAS----------RAI 304
                 *****996442269***********************************************9834444444...333333344444..........446 PP

                 CCHB-TC--HHHHHHHHHHHSSEEEEEEE-SHHHHHHHHHTTESEEEE--GGGTSSTT---HHHCHHHHHHHH.......SS-EEEESS--SHHHHHHH CS
      FMN_dh 196 gkqldpsltwddikwlreqtklplvvKGvltaedakraveaGvdgivvSNHGGRqldgapatidvLpeiveavgg.....rievlvDgGirrGsDvlkA 289
                 ++++dpsl+w+di w+re t++p+v+KGv++ ed+ +a++aGv+g+v+SNHGGRqld+a ++i++L e++ a+++     +iev++DgG+rr +D++kA
  KHJ31177.1 305 SSFIDPSLNWKDIPWFREITRMPIVLKGVQCIEDVLLAIDAGVQGVVLSNHGGRQLDFARSAIEILAEVMPALRElrlesKIEVYIDGGVRRATDIIKA 403
                 99**********************************************************************986667779****************** PP

                 HHTT-SEEEESHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-SBHHHHHCGGE CS
      FMN_dh 290 lalGAdavllGRpflyglaagGeeGvervleilraelertmallGvksvaeldrsll 346
                 l+lGA++v++GRpfly+++a+G+ Gv+r+++il++e+e +++llG+k+++ l+++++
  KHJ31177.1 404 LCLGAKGVGIGRPFLYAMSAYGQSGVDRAMDILKDEMEVNLRLLGCKEINGLNPTFI 460
                 *****************************************************9987 PP

>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.3   0.0   7.8e-26   1.8e-22       4      73 ..       7      76 ..       6      77 .. 0.97

  Alignments for each domain:
  == domain 1  score: 79.3 bits;  conditional E-value: 7.8e-26
                HHTTTECTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHHHHHHHG.GEEEEE CS
      Cyt-b5  4 elskhngkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekdaekllkk.ylvGkl 73
                e++khn+++++wv+i+ k YDv++fls+hpGg+++ilk+aGkDat +f+ + h ++ ++k+l++  ++G++
  KHJ31177.1  7 EIAKHNSEKSCWVIIHKKAYDVTEFLSNHPGGSEIILKFAGKDATSEFEPI-HPSDTLQKYLDQsKHLGDV 76
                789************************************************.99999*******9999987 PP

>> Glu_synthase  Conserved region in glutamate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   0.0   4.4e-10   9.8e-07     259     310 ..     370     421 ..     363     425 .. 0.94

  Alignments for each domain:
  == domain 1  score: 28.2 bits;  conditional E-value: 4.4e-10
                   HHHHHHHHHHTT-GGG-EEEEESS--SHHHHHHHHHHT-SEEE-SHHHHHHT CS
  Glu_synthase 259 laevdqtlkeeglrdrvsliadGglktgadvvkalalGAdavgigtaalial 310
                   laev  +l+e  l +++++ +dGg++ ++d++kal lGA  vgig+  l a+
    KHJ31177.1 370 LAEVMPALRELRLESKIEVYIDGGVRRATDIIKALCLGAKGVGIGRPFLYAM 421
                   899999****************************************999998 PP

>> IMPDH  IMP dehydrogenase / GMP reductase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.1   1.3e-07    0.0003     204     239 ..     382     417 ..     364     433 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 1.3e-07
                 CTCT-EEEEES---SHHHHHHHHHTT-SEEEESCCC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       IMPDH 204 kkagvpviaDGGikysgdivkAlaaGadavmlGsll 239
                  + +++v  DGG++   di+kAl++Ga+ v +G+ +
  KHJ31177.1 382 LESKIEVYIDGGVRRATDIIKALCLGAKGVGIGRPF 417
                 356799**************************9866 PP

>> NMO  Nitronate monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   2.7e-07   0.00062     138     240 ..     328     432 ..     260     469 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 2.7e-07
         NMO 138 vliptissvkearkvearGaDalivqGpeaGGhqGtpevgdkglfaLvpqvldavd.......iPviAaGGiidrrgvaaaLalGAsgvqigtrfLltk 229
                 +++  +  ++++  ++ +G   +++  ++ GG q +++    + ++++++v+ a+        i v   GG+ ++ ++  aL+lGA+gv ig  fL + 
  KHJ31177.1 328 IVLKGVQCIEDVLLAIDAGVQGVVL--SNHGGRQLDFAR---SAIEILAEVMPALRelrleskIEVYIDGGVRRATDIIKALCLGAKGVGIGRPFLYAM 421
                 5666677777777777777777777..477888886666...577777777777777888999*********************************998 PP

         NMO 230 esdakdahkkk 240
                  +  +  ++++
  KHJ31177.1 422 SAYGQSGVDRA 432
                 77666655555 PP

>> His_biosynth  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.18   4.1e+02     192     219 ..     326     352 ..     312     354 .. 0.74
   2 !   12.4   0.1   3.5e-05     0.079      64     102 ..     376     414 ..     366     423 .. 0.64

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.18
                   SEEEEESS--SHHHHHHHHHTTCSEEEE CS
  His_biosynth 192 ipviasGGvgsledlkelksegvdaviv 219
                   +p++   Gv+ +ed+  + ++gv++v++
    KHJ31177.1 326 MPIV-LKGVQCIEDVLLAIDAGVQGVVL 352
                   4443.35899999999999999998875 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 3.5e-05
                   HHHHHHHH-SSEEEEESSSSSHHHHHHHHHCT-SEEEES CS
  His_biosynth  64 lveeiaeevfipvqvGGGIrsledveelleagadkviig 102
                   +++e++ e +i+v ++GG+r+  d+ ++l +ga+ v ig
    KHJ31177.1 376 ALRELRLESKIEVYIDGGVRRATDIIKALCLGAKGVGIG 414
                   445555566666666666666666666666666666555 PP

>> ThiG  Thiazole biosynthesis protein ThiG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.11   2.4e+02     170     204 ..     320     353 ..     311     366 .. 0.83
   2 ?    8.3   0.0   0.00058       1.3     166     201 ..     376     411 ..     369     420 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.11
                 HHHH-SS-BEEES---SHHHHHHHHHTT-SEEEES CS
        ThiG 170 iieeakvPvivDAGigspsdaaqamelGadavlln 204
                 ++e +++P+++  G+   +d+  a++ G+++v+l 
  KHJ31177.1 320 FREITRMPIVL-KGVQCIEDVLLAIDAGVQGVVLS 353
                 56667899887.59*****************9875 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00058
                 HHHHHHHH-SS-BEEES---SHHHHHHHHHTT-SEE CS
        ThiG 166 alkiiieeakvPvivDAGigspsdaaqamelGadav 201
                 al+ ++ e k+ v +D G+++++d+++a+ lGa++v
  KHJ31177.1 376 ALRELRLESKIEVYIDGGVRRATDIIKALCLGAKGV 411
                 577888899************************998 PP

>> G3P_antiterm  Glycerol-3-phosphate responsive antiterminator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.033        74     124     170 ..     310     355 ..     300     356 .. 0.87
   2 ?    5.7   0.0     0.004         9     118     169 ..     365     415 ..     359     419 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.033
                   SGGGHHHHCTSTTS...EEEEESS--SHHHHHHHCTT.SSEEEE--H CS
  G3P_antiterm 124 PglvpkvikeikkelkipiiaGGLietkedveealkaGaiavstsnk 170
                   P+l  k i  +++ +++pi+  G ++  edv  a++aG+++v  sn+
    KHJ31177.1 310 PSLNWKDIPWFREITRMPIVLKG-VQCIEDVLLAIDAGVQGVVLSNH 355
                   566667788999999******99.78899*************99985 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.004
                   SEEEEESGGGHHHHCTSTTS...EEEEESS--SHHHHHHHCTT.SSEEEE-- CS
  G3P_antiterm 118 davevlPglvpkvikeikkelkipiiaGGLietkedveealkaGaiavstsn 169
                    a+e+l  ++p  ++e++ e+ki++   G ++   d+ +al  Ga +v  ++
    KHJ31177.1 365 SAIEILAEVMPA-LRELRLESKIEVYIDGGVRRATDIIKALCLGAKGVGIGR 415
                   589999999986.57888899999999999****************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       663  (0.0369792); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 3536.65
//
Query:       KHJ31178.1  [L=203]
Description: putative mitochondrial inner membrane protease subunit 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.7e-05   23.0   0.4    0.00051   19.9   0.1    2.5  2  Peptidase_S24  Peptidase S24-like
  ------ inclusion threshold ------
       0.06   13.1   0.0         12    5.7   0.0    2.3  2  Peptidase_S26  Signal peptidase, peptidase S26


Domain annotation for each model (and alignments):
>> Peptidase_S24  Peptidase S24-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.1   5.7e-08   0.00051       1      55 [.      52     117 ..      52     126 .. 0.79
   2 ?   -1.4   0.0      0.26   2.3e+03      56      68 ..     146     158 ..     136     159 .. 0.61

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 5.7e-08
                    EXXSSTTCCTXXTTXEEEEECTS..........---TTSEEEEEETTCE.-EEEEEEEEETTEEEE CS
  Peptidase_S24   1 rvpGdSMeptlldGdlilVdkfs..........epkrGdivvfrlpgee.eayiKrviglpgdrvl 55 
                    +++G+SM+p ++ +     +k+           +++rG +v +r p ++ ++ iKr++ l+gd+v 
     KHJ31178.1  52 QITGESMYPNFNTNFNKNLKKDIcwtkkwraidNLDRGMVVTVRNPLNPeTLQIKRIVALEGDTVI 117
                    589****99998763333333334444455999****************9*************997 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.26
                    E.SSTTSTEEEEC CS
  Peptidase_S24  56 lasnneypplyin 68 
                    +  +n+y+p+ in
     KHJ31178.1 146 TLDSNTYGPIPIN 158
                    3334469**9998 PP

>> Peptidase_S26  Signal peptidase, peptidase S26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0    0.0016        15      46      66 ..      98     118 ..      76     125 .. 0.84
   2 ?    5.7   0.0    0.0014        12     100     137 ..     129     168 ..     120     169 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0016
  Peptidase_S26  46 lprgvpllKrVlalagqevcv 66 
                    l+++++ +Kr++al+g++v +
     KHJ31178.1  98 LNPETLQIKRIVALEGDTVIT 118
                    66777889**********976 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0014
  Peptidase_S26 100 laegelfllskeva..dSfDsRYfGpvpassvigvarpvl 137
                    ++ +++++ +++++  + +Ds  +Gp+p + ++g+++ +l
     KHJ31178.1 129 VPLNHVWVEGDNKNalKTLDSNTYGPIPINLIQGKVTHIL 168
                    6667777766433312689***************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1480.71
//
Query:       KHJ31179.1  [L=313]
Description: putative glycerol dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-44  152.2   0.1    1.3e-42  146.0   0.1    2.0  1  Aldo_ket_red  Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.0   0.1   7.5e-47   1.3e-42       2     290 ..      20     283 ..      19     287 .. 0.94

  Alignments for each domain:
  == domain 1  score: 146.0 bits;  conditional E-value: 7.5e-47
                   EEEE-SSS-ST.TS-HHHHHHHHHHHHHTT--EEE--TT-TTTHHHHHHHHHHHH...-TTTGGG-EEEEEE--SSSTTSSSS-HHHHHHHHHHHHH CS
  Aldo_ket_red   2 lglGtwqlgskeeiskeealellrraleaGinffDtAevYgkgqseellGealkk...srkkreeviiatKvdlrdaeiksglskeniresleeslk 95 
                   lglGtwq  +        + +++ +al+ G++++D+A vY    +e+++Ge lk+   ++ kre++++++K+      ++ ++s+   +e+l++slk
    KHJ31179.1  20 LGLGTWQSDT------GLVKDAVSYALSIGYKHIDCAYVY---CNEQEVGEGLKEafaKGIKREDIFVTSKL------WCTYHSR--AEEALDKSLK 99 
                   8999997776......59999*******************...99999***9999998899***********......8888876..68******** PP

                   HHT-S-EEEEEE-S--TTS-......................HHHHHHHHHHHHHTTSEEEEEEES--HHHHHHHHHTTT--EEEEE-B-BTT-HHH CS
  Aldo_ket_red  96 rLgtdyvDllllHrpdpslp.....................sieevldaleelvkeGkiraiGvSnfsveqlekakkkkkvkivavqveynllrele 171
                    Lg+dy+Dl+l+H+p p+ p                         +++ +e+lvk+Gk++aiGvSn+s   le++++++++ ++++q+e ++   l 
    KHJ31179.1 100 SLGLDYLDLYLVHWPLPMNPngnhdlapklsdgsydlqkdwTHIQTWKSMEKLVKSGKVKAIGVSNYSKLYLEELLAQAEIVPAVNQIENHPS--LP 194
                   *****************************************999*************************************************..** PP

                   HTTHHHHHHHTT-EEEEBSTTGGGTTGTTTSS---SSSCCC-------TS-HHHHHHHHHHHHHHHHTT--HHHHHHHHHTTSTT-SEEEE--SSHH CS
  Aldo_ket_red 172 eegllelckkkgvpliaysplggGlltgkyqseedkedkeprkdlkrdertsknldaaeelselakehgvslaqlalryalsqpavgivipgasnie 268
                   ++ +++lc++kg+ + aysplg+                               l + +++ ela++++v++  + l+y l   ++++v+p++   e
    KHJ31179.1 195 QQDVVDLCNEKGIHVTAYSPLGSTGTP---------------------------LMKEPIIVELAEKKNVKPVSILLSYHL--ARGTSVLPKSVHKE 262
                   **********************64444...........................357899*********************..************** PP

                   HHHHHHGGGG----HHHHHHHH CS
  Aldo_ket_red 269 qlednldalelklseeevaeld 290
                   ++++n d l + l++e++  l+
    KHJ31179.1 263 RIKENKDCL-IFLDKEDMIVLN 283
                   *******99.889999887666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2187.04
//
Query:       KHJ31180.1  [L=323]
Description: putative ring-like domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.8e-56  189.1   2.1    7.8e-56  189.1   2.1    1.9  2  SMC_Nse1      Nse1 non-SMC component of SMC5-6 complex
    3.4e-14   52.9   8.2    3.4e-14   52.9   8.2    1.6  2  zf-RING-like  RING-like domain
  ------ inclusion threshold ------
      0.039   13.5   0.2      0.039   13.5   0.2    1.7  2  Cas_Cas7      CRISPR-associated protein Cas7
      0.054   13.7   0.0       0.11   12.7   0.0    1.5  1  AbiEi_4       Transcriptional regulator, AbiEi antitoxin
       0.11   12.8   8.2       0.19   12.1   8.2    1.4  1  zf-RING_2     Ring finger domain


Domain annotation for each model (and alignments):
>> SMC_Nse1  Nse1 non-SMC component of SMC5-6 complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.1   2.1   2.2e-59   7.8e-56       1     194 []       9     185 ..       9     185 .. 0.96
   2 ?   -3.1   0.2       1.6   5.9e+03     137     148 ..     275     288 ..     259     309 .. 0.42

  Alignments for each domain:
  == domain 1  score: 189.1 bits;  conditional E-value: 2.2e-59
    SMC_Nse1   1 nralLQallargilteeelkkvlaailsae..eevspeditqedleeyiakinealspldyeirsvrhqlgkervyyalVNttsdeetklATtfsaeei 97 
                 nra+LQa++ rg lt +e k++ a+il+++  ++++++d+ q++++++ia+++ea+s ++yeirs++hq++k+++ ya+VN+ sd+ t+ AT  s++e+
  KHJ31180.1   9 NRAFLQAIMGRGSLTLSEGKSIVATILNVQegTTITEDDVSQATFDSFIAAAAEAVSCFEYEIRSMQHQITKNKI-YAFVNSVSDPFTQQATLRSPDEL 106
                 7****************************98888888**********************************8888.*********************** PP

    SMC_Nse1  98 afiKrlldamfetsntrrlevmaitesqavvlelarilaaaraerrstelsqeeaaadkgLtaseaeklLkrLveegWleksreGfysLdlRallEL 194
                  +iKrlld +fet+n+rr evmait++qa+++++ +                   ++dkgLt++eae+lL++L +e+Wle+s++G+ysL++Ral+EL
  KHJ31180.1 107 LYIKRLLDTIFETNNSRRKEVMAITSMQALEIQIRK------------------GNSDKGLTQTEAEALLSSLEKENWLERSPKGYYSLAPRALMEL 185
                 *****************************9999999..................345689************************************9 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.6
    SMC_Nse1 137 aaraerr..stels 148
                 ++r e+r  +++++
  KHJ31180.1 275 KSRGEKRrrQSQSN 288
                 23311111211111 PP

>> zf-RING-like  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       2.5   9.1e+03      26      35 ..      65      74 ..      64      77 .. 0.72
   2 !   52.9   8.2   9.4e-18   3.4e-14       1      43 []     208     250 ..     208     250 .. 1.00

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.5
  zf-RING-like 26 dCfqhyirth 35
                   Cf++ ir+ 
    KHJ31180.1 65 SCFEYEIRSM 74
                  6999998764 PP

  == domain 2  score: 52.9 bits;  conditional E-value: 9.4e-18
  zf-RING-like   1 CeaCkeivtqGvrCsnesCnvrlHvdCfqhyirthsskkCpkC 43 
                   CeaC+eivt+G+rC + +Cn+rlH+ C +++++++ s++CpkC
    KHJ31180.1 208 CEACREIVTVGQRCIDLDCNTRLHNICEAAFWKSRPSRNCPKC 250
                   ******************************************* PP

>> Cas_Cas7  CRISPR-associated protein Cas7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.2   1.1e-05     0.039     110     222 ..      19     146 ..       7     172 .. 0.76
   2 ?   -2.5   0.1      0.81   2.9e+03     189     231 ..     265     306 ..     262     319 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.1e-05
    Cas_Cas7 110 rGpVqltfarslepvlpeeqsitrmaateek........kekek..........kqrtmgrkhivpyglYrahgfinanlaek.tgfseeDlellkeal 189
                 rG + l+ ++s+   + + q+ t+ ++++ +        +   +          + r+m  + i +  +Y++  +++ ++ ++ t  s ++l  +k+ l
  KHJ31180.1  19 RGSLTLSEGKSIVATILNVQEGTTITEDDVSqatfdsfiA---AaaeavscfeyEIRSMQHQ-ITKNKIYAFVNSVSDPFTQQaTLRSPDELLYIKRLL 113
                 6888888888887775555555555554443233444441...0445688887677777655.56788*************99899999********** PP

    Cas_Cas7 190 lnmfehdrsaargemevrkllvfehesklgnap 222
                  + fe ++s+ +  m++  +  +e + + gn +
  KHJ31180.1 114 DTIFETNNSRRKEVMAITSMQALEIQIRKGNSD 146
                 *******************99999988888754 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.81
    Cas_Cas7 189 llnmfehdrsaargemevrkllvfehesklgnapaaklfdlvk 231
                 ++   e+ r ++rge + r+    + +++ g++++ ++ + v+
  KHJ31180.1 265 ITIEEENLRRKSRGEKRRRQSQSNKVNNANGEEQE-QIDNGVR 306
                 55555677777888888888888888777777444.4665555 PP

>> AbiEi_4  Transcriptional regulator, AbiEi antitoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0     3e-05      0.11      28      48 ..     154     177 ..     134     178 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3e-05
     AbiEi_4  28 a...lrrLvrkGwLvrlrrGvYal 48 
                 a   l+ L ++ wL+r ++G+Y l
  KHJ31180.1 154 AealLSSLEKENWLERSPKGYYSL 177
                 25579*****************65 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   8.2   5.4e-05      0.19       3      43 ..     208     250 ..     206     251 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 5.4e-05
   zf-RING_2   3 CpICleelssadsvlllpCgHvfhreCler.w.lrssstCPlC 43 
                 C  C e ++ +++++ l+C+   h  C +  w  r+s++CP C
  KHJ31180.1 208 CEACREIVTVGQRCIDLDCNTRLHNICEAAfWkSRPSRNCPKC 250
                 99**9999*******99***9999999777355666666**** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1467  (0.0818227); expected 358.6 (0.02)
Passed bias filter:                      634  (0.0353617); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2357.42
//
Query:       KHJ31181.1  [L=325]
Description: putative hsp90 co-chaperone aha1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-38  132.0   0.2    2.9e-38  131.2   0.2    1.4  1  Aha1_N    Activator of Hsp90 ATPase, N-terminal
    3.3e-20   72.6   0.1    5.6e-20   71.8   0.1    1.4  1  AHSA1     Activator of Hsp90 ATPase homolog 1-like protein
  ------ inclusion threshold ------
      0.055   13.5   0.6        2.8    7.9   0.1    2.3  2  DUF3859   Domain of unknown function (DUF3859)


Domain annotation for each model (and alignments):
>> Aha1_N  Activator of Hsp90 ATPase, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.2   0.2   4.9e-42   2.9e-38       1     137 []      13     144 ..      13     144 .. 0.97

  Alignments for each domain:
  == domain 1  score: 131.2 bits;  conditional E-value: 4.9e-42
      Aha1_N   1 eKdatpWskerlkelllslkleneeaksvkitevksveGdasvnqrKgKvifiydlklklewegtvkkedgkkvkGeieipelssenddddyeievsvk 99 
                 +Kda pW+k++++e++++lk  +++ + +ki+++ s++Gd++vnqrKgKvi i+d+kl++e++gt+   d+++v+G+i++pe+++++ +++y+++++++
  KHJ31181.1  13 NKDAGPWAKQYIEEQIKNLKAVDNGVT-AKIDKLISMDGDVDVNQRKGKVISIFDVKLVIEYSGTT--RDNEDVSGSITVPEVAHDTGENEYVFDIDIY 108
                 7***********************999.*************************************9..******************************* PP

      Aha1_N 100 kdeekkekqklkelikskgvpklreklakfvkeLkeeh 137
                 ++  +++k+ +kel++ k+vp+lr+++ak+ ++L++eh
  KHJ31181.1 109 SE--SNSKAPVKELVRAKIVPQLRKEFAKLGPALISEH 144
                 96..667889*************************987 PP

>> AHSA1  Activator of Hsp90 ATPase homolog 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.8   0.1   9.3e-24   5.6e-20       1     124 [.     200     319 ..     200     320 .. 0.90

  Alignments for each domain:
  == domain 1  score: 71.8 bits;  conditional E-value: 9.3e-24
                 SS-HHHHHHHHH-HHHHHHHEEEEEEEE--.STTEEEEEEETTTSEEEEEEEE..EEEEETTTEEEEEEEEETSETEEEEEEEEEEEE..ETTEEEEEE CS
       AHSA1   1 dapperVfraltdpellkrWftlteaemdl.rpGgkfrlrdspdgkefgnege..ylevvpperlvytwrledepeeeestvtielee..egggTrltl 94 
                 +ap++++++++tdp +++++ + +   ++  ++Ggkf+l        fg++++  y e+v+p+++v++wrl+++p+++ s+++i + +  +++ T +++
  KHJ31181.1 200 RAPASELYKTFTDPTRIASFTRAPPKLFEGaQVGGKFEL--------FGGNVVgeYVELVEPTKIVQSWRLNQWPKGHVSRLEIGFDQndVDNVTVMRV 290
                 59******************4444444454788******........99999999********************************9777888***** PP

                 EEEEEEHCHHHHHHHHHHHHHHH.HHHHHHH CS
       AHSA1  95 thtglprkqkeeegveeGweqsl.dqLkall 124
                 t++g+p +q++   ++++w++++ +++k+++
  KHJ31181.1 291 TWSGVPVGQEDV--TRANWNEYYvRSIKQTF 319
                 *********999..9********99999986 PP

>> DUF3859  Domain of unknown function (DUF3859)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.1   0.00046       2.8      40      96 ..      58     113 ..      28     117 .. 0.86
   2 ?    3.6   0.1      0.01        62      70     110 ..     165     204 ..     156     207 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00046
                 -SEEE--TT-EEEEEE-EES--TTS-EEEEEEEEEEE-TTS-EEEEEEEEE---TT- CS
     DUF3859  40 ttkvpAelgieFGvivnikkakgedeltltithPglpdddGetsekfegevyleend 96 
                   kv +  +++  ++++ +   +ed +   it P++  d+Ge++  f+ ++y e+n 
  KHJ31181.1  58 KGKVISIFDVKLVIEYSGTTRDNED-VSGSITVPEVAHDTGENEYVFDIDIYSESNS 113
                 5678888899999999999999999.**********************999888775 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.01
                 EEEEEEE-TTS-EEEEEEEEE---TT-S-EEEEEE--SGGG CS
     DUF3859  70 ithPglpdddGetsekfegevyleendwdfvlgftfweple 110
                 + +P++  ++G+ + +++ e  ++ n  +    ++f +p +
  KHJ31181.1 165 LHKPPIEHRTGDIHTQVNKENTVV-NTTTVTANDEFRAPAS 204
                 678******************999.8888888999998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2573.08
//
Query:       KHJ31182.1  [L=1030]
Description: putative aspartyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-72  243.9   0.0    1.1e-71  241.4   0.0    2.0  2  tRNA-synt_2      tRNA synthetases class II (D, K and N)
    3.4e-10   39.4   0.0    4.7e-10   39.0   0.0    1.2  1  DUF2156          Uncharacterised conserved protein (DUF2156)
    0.00094   19.1   0.0      0.002   18.1   0.0    1.6  1  tRNA_anti-codon  OB-fold nucleic acid binding domain
  ------ inclusion threshold ------
      0.078   13.6   0.0       0.22   12.1   0.0    1.8  1  MCM_N            MCM N-terminal domain


Domain annotation for each model (and alignments):
>> tRNA-synt_2  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.4   0.0   2.6e-75   1.1e-71       3     312 ..     348     671 ..     346     673 .. 0.89
   2 ?   -0.3   0.0     0.097   4.3e+02     250     301 ..     980    1029 ..     976    1030 .] 0.86

  Alignments for each domain:
  == domain 1  score: 241.4 bits;  conditional E-value: 2.6e-75
                  CHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHTT-EE----SEESS--SSSS--EEEEETTT.TEEE....-E-S-SHHHHHHHHHCTHSEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2   3 elrlknryldlrtekvskvlrlrstvtkavrkyleengfieietPiLsksdteegarlFkvksrekekeff....aLtqspqlylellivagidrvfq 96 
                   +rl+nr++dlrt   ++++r+++ + +++r+yl+++gf+ei+tP ++  +te+ga  F v       ++f    +L+qspql ++++i+a ++rv++
   KHJ31182.1 348 RVRLNNRIVDLRTGPSQSIFRIQAGICNSFRSYLDSKGFLEIHTPKIQGGATESGASVFEV-------NYFgrpaFLAQSPQLAKQMCIAADFERVYE 438
                  689**********************************************************.......88899999********************** PP

                  EEEEE--S--BTTB-S-CEEEEEEEEET-SCHH.HHHHHHHHHHHHHHHHHHCSCCCCCHTTTTTS...EE-SSS-EEEEHHHHHHHHHTS....... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxx....... RF
  tRNA-synt_2  97 iaraFRaEdsrtdrhlaEFtqieaemsfieeed.imqvleelikslvkevlessakdiefvirrns...kdlkkpfkrltykeaieklnei....... 183
                  i+++FRaEds+t+rhl+EFt +++em++ e+    ++++++++k+l+ke+ ++ + +i+   +          +   +++++e ++ l+e        
   KHJ31182.1 439 IGPVFRAEDSNTTRHLTEFTGLDLEMAIEEHYYeALSIIDGMLKNLWKELYQRYQPEIDLISQVYRherILWLEDTLHISFSEGVKMLQEVgwtddng 536
                  ****************************998877****************99998877766655543332233346699********99999999888 PP

                  .....-SS-.-HHHHHHHHH....HS--SEEEEEEEBGGGSTTCBBBSTTSTTBBSEEEEEETTEEEEEEEEB--SHHHHHHHHHHCCHHSSSGGGGH CS
                  .....xxxx.xxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 184 .....gkdl.dkaderalvk....keknepvfvtdfPaelkpFyarkeeddkkltesyDllingvElvgGslRiedpeeleeklkskgldeeaeekfs 271
                       ++dl  +a+ r+       k k++ + + +fPa+ +pFya  + +d++ t+s+D++++g E+++G +Ri+d + le+++k++gl     e++ 
   KHJ31182.1 537 nmpsnTEDLsTRAEARLG-AlikeKYKTDYYILDKFPASARPFYAMPDPKDDRFTNSFDIFLRGQEIISGGQRIHDAKFLEKQMKKNGLR---LESMP 630
                  888874443134444433.1344477888888999*******************************************************...9**** PP

                  HHHHHHHCT--SEEEEEEEHHHHHHHHCT-SSGGGCSSS-X CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 272 wylealeyGapphgGlglGldRlvmlllgsesIrdviaFPk 312
                  +yle +++Gapph+G+g+Gl+Rl+ l+l++ +Ir +++FP 
   KHJ31182.1 631 DYLEGFRWGAPPHAGCGIGLERLTSLFLNLGNIRLASIFPL 671
                  ****************************************6 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.097
                   HHHHHHHHHHCCHHSSSGGGGHHHHHHHHCT--SEEEEEEEHHHHHHHHCT- CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2  250 peeleeklkskgldeeaeekfswylealeyGapphgGlglGldRlvmlllgs 301 
                   + +l+++lk ++++ e +ek++ +++ + + + p gGlg +  R +m +lg+
   KHJ31182.1  980 YSKLYQQLKLNNKS-EFREKMGVWIDPVYV-CYPRGGLGPSAIRAIMGFLGA 1029
                   67788888888888.999********9988.99***********99998886 PP

>> DUF2156  Uncharacterised conserved protein (DUF2156)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   0.0   1.1e-13   4.7e-10       3     298 .]     714    1010 ..     712    1010 .. 0.83

  Alignments for each domain:
  == domain 1  score: 39.0 bits;  conditional E-value: 1.1e-13
                  CCCTSSGGGGHHHHHHCCHCCEEE.ECCTTEEEEEEEECTCEEEECS-EE.CCGHHHHHHHHHHHHHHC.TSEEEEEEE-HHHHHHHHH.CTEEEEC CS
     DUF2156    3 llersgsedslsnlalwrdksyyf.spsgdalvayrvkggvalalgdPvGdpeawpeaieeflelaaeh.gwrpafygvseelaellae.lglsalr 96  
                  l++++g  d  +n + ++++++++  ps  a+  y   +g+a+  gd ++d+++++++i  fl++ ++h +++p+++ + + + ++l e + ++++ 
  KHJ31182.1  714 LIANYG--D-AANTTWLDEQYHVWrHPSSGAAQGYVINSGHAIIIGDTLCDKSQYQQIISSFLQFIQDHrDLKPIWLIAGPITEKILGEkHSWRTIG 807 
                  556666..3.35555555566666699****************************************99899***************99566***** PP

                  CCEEEEEEHHHH.HTTSGGG.HHHHHHHHHHHHCTECEEEEEGGGH-HHHHHHHHHHHHHHHHHTTCHHHHCCCHHHHCHHHH.TSEEEEEEE.TTE CS
     DUF2156   97 lgeeavvdledf.tLsGkkf.rnvRnainraeraGytveverisdlspellaelkeiseeWlkqkeatEkgfslglfdelddl.dlrglvvrdeegr 190 
                    +e ++d+++   ++ k++ r++R+a n   r+ ++    ++    +++++++    + W k++  +  +  l  ++++ d+ + r ++ +  +g+
  KHJ31182.1  808 CIAEERIDPRNNpAMKDKDLaRKIRHAHNEGVRE-LKLINSQP-T-YEDIRTKIGSRIHDWHKNR--KGTQVHLTKIRPWVDQeHRRYFYSHTIDGK 899 
                  ******************975789**********.88665555.3.59****************9..788888888888866648999999999*** PP

                  EEEEEEEEEECTTTEEEEEEEEE-TT.STTHHHHHHHHHHHHCHHTT..-SEEEEEEE................HHHHHHHHHHHHHTTTCHHHHHH CS
     DUF2156  191 ivAftsfeplngkdglsldlmRrdpdapnGlmefliaelaeelkeeg..veyvsLgfaplagl.geregagllerllrllleflerdygfegLrrfK 284 
                  i+A++ +++l  ++g+ + +    p ap+G++e li   ++   +e+  ++ v +g  +l  l g r+  +   ++l+  +  l + + +    +f 
  KHJ31182.1  900 IHALVVLHKLSPENGYQIKISLEFPGAPSGTIESLILYSMKSIVSEDpeIKQVTFGTGALPILnGGRNIGNFKVKALKKAYSKLYQQLKLNNKSEFR 996 
                  ***********99***********************9999988766555888888888888888777777777777777777777777666666666 PP

                  HCT--CE.EEEEEEE CS
     DUF2156  285 lkyqPew.eprYlay 298 
                  +k   +w  p+Y++y
  KHJ31182.1  997 EK-MGVWiDPVYVCY 1010
                  66.455556666665 PP

>> tRNA_anti-codon  OB-fold nucleic acid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   4.4e-07     0.002       3      70 ..     158     252 ..     156     258 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 4.4e-07
                      EEEEEEEEEEEEETTEEEEEEEETTEEEEEEEET.....................HHHHHHHTTS-TTSEEEEEEEEEECTTS.......SEEE CS
  tRNA_anti-codon   3 vaGrvtsisdrsggkvifidlrDgtgriqvvlfr.....................eeatklaenlkeGdvvrvtGrvkrrpgg.......elel 68 
                      +++r+++ + r +++++fi+ r  t +iq +l +                     e++ ++ e+l+ +++v v+ ++++ p+         +e 
       KHJ31182.1 158 FRARIHTLR-RLSSNMVFIIFRQQTITIQGILQSsrqperlirnsehktciepitEKMVRYVEHLPSETLVLVRAKLREAPHIiknatihNYEF 250
                      689*****9.*********************************************************************954444345553444 PP

                      EE CS
  tRNA_anti-codon  69 kv 70 
                       v
       KHJ31182.1 251 EV 252
                      44 PP

>> MCM_N  MCM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.9e-05      0.22      44      86 ..     452     495 ..     450     547 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4.9e-05
       MCM_N  44 ddLaafde.eLaeailenpkeylplleealkevvkklepsykdd 86 
                 ++L +f   +L +ai+e+++e l + +  lk++ k+l+++y+ +
  KHJ31182.1 452 RHLTEFTGlDLEMAIEEHYYEALSIIDGMLKNLWKELYQRYQPE 495
                 79****999******************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1030 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.27s 00:00:00.99 Elapsed: 00:00:00.42
# Mc/sec: 7391.05
//
Query:       KHJ31183.1  [L=1201]
Description: putative glutathione transferase omega-1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   3.1e-168  561.2   0.0   3.9e-168  560.9   0.0    1.1  1  Gryzun       Gryzun, putative trafficking through Golgi
    1.3e-67  228.2   3.9      1e-61  208.8   4.0    2.2  2  Foie-gras_1  Foie gras liver health family 1


Domain annotation for each model (and alignments):
>> Gryzun  Gryzun, putative trafficking through Golgi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  560.9   0.0  4.3e-172  3.9e-168       1     592 []     624    1200 ..     624    1200 .. 0.95

  Alignments for each domain:
  == domain 1  score: 560.9 bits;  conditional E-value: 4.3e-172
      Gryzun    1 vvlkeedvvsflsasfvFekkegkvGeplqaQlaitSealkssapitlsevkveFegslkpiklkhdeeeee.esskskvsissvsleeetessske 96  
                  +vl++++ +sfls++++F + + kvG+++ +Q++++S+a +s+api +s+v++ Feg++ +i l+h+++e     +++  si +vsl++        
  KHJ31183.1  624 IVLHNTELHSFLSVTYIFDSPKIKVGDMCLSQFVVSSNAISSAAPILVSKVEICFEGKIGSIILEHHNSEIMpLGKDGLLSIRRVSLDDP------- 713 
                  799****************************************************************9998877788999**********....... PP

      Gryzun   97 seteklselkgsadLtlkpgqtkvfelaiilreaGeakvasvtlsveeekFdLeytisekeekeavwWaeskkgakkrrvrkdsdtaikilPkPPkl 193 
                    ++ +++ + s+ L +++g+t+vfe++  l+eaGe+++a++ + ++ e FdLey+++  +++++ +W+ ++k+a+kr v  ++++ i++lPkPPkl
  KHJ31183.1  714 -LKTGITNSTVSTSLLFESGSTSVFEFNSYLKEAGEVRAATARFFISLELFDLEYVHKIPRKTTPGLWW-GEKSARKRPVHISASS-ITVLPKPPKL 807 
                  .4556667777899*******************************************************.9999999999999998.********** PP

      Gryzun  194 eiklpelkeqYYtnEkieLeleieNeEdeeaevklevrllGesesalkisvldeeeeaeeaeeeeekeeslp..klgklessastelsivltetedp 288 
                  +++++ + ++Y  nEk++L+l i N+Ed++  v l+ ++l ++ +++ ++++++ e+++++ e ++ + +l+   +gk+ s++s+++++v+++ e +
  KHJ31183.1  808 KLQFKIMDHKYCINEKLDLQLVIINDEDNDVFVALDAQFLEDQVPKVLLEIESKLENNSDNIETKSDKLNLKgiYIGKIISGESATVNVVVHPFELT 904 
                  ************************************************999777666666655444444444667********************** PP

      Gryzun  289 leyeleikasYhlvsdletpiiktlsvklslvnpFEAnYdllprlhpdpWPslFdveesealededakeakarglaqrwclvaklasFAeedLvved 385 
                   ++el +ka Y l  ++et ++kt+s++l+++ pFEA+Yd++pr+hpdpWPslF++ e  +  ++d++e  a+g+ q+wcl+++ +s  + d+++ed
  KHJ31183.1  905 GKFELFLKADYRLANEIETSMLKTASIELQIIVPFEASYDFSPRIHPDPWPSLFSHMEGID--ETDSQELIAQGIPQKWCLTTHCTSLLSSDIIIED 999 
                  ******************************************************9988876..566667889************************* PP

      Gryzun  386 vdlevlsveggavcsvskspekpeveedgltikpeeleeaqFdlevqklsLddrrpvaldlaleikWrRkssessseaevntttlavprllvlgsEP 482 
                  +++e+  ++g+++c ++   + ++++++gl + p +l+ea+Fd+++q + +ddr+++++d +l + WrR++++s    ++ +t+l++prl v+gsEP
  KHJ31183.1 1000 ISTEINLINGNIKCLTT---KWKDFPQSGLNLPPGTLHEAKFDITTQNIDIDDRSTTTIDKSLLVLWRRNKDNS----PTIQTKLNIPRLHVSGSEP 1089
                  *****************...7888899*******************************************9997....799**************** PP

      Gryzun  483 RvLasvsassalpglihldytlENpsmHfLtFgltmeaseeFAFsGpKqttvqllPlSRrtvrYrllplvrgawirp.qlvvvDkYFqkvLrvlpte 578 
                  Rv+ +vs++s+ p + h+++++ENps+HfL+Fgl me+se+FAFsG Kq  +qllPlSR+ +++++lp+vrg+w+ p q+v++D+YFqkvLrv+p +
  KHJ31183.1 1090 RVISEVSYDSTNPLIAHFNIMIENPSHHFLSFGLFMESSESFAFSGIKQGILQLLPLSRKRIQFQILPYVRGKWLGPiQCVIRDRYFQKVLRVIPSD 1186
                  ************************************************************************************************* PP

      Gryzun  579 gmkiDkkGllvwvd 592 
                  gm iDk+G+++w++
  KHJ31183.1 1187 GMMIDKEGIMIWIP 1200
                  ************98 PP

>> Foie-gras_1  Foie gras liver health family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   3.6e-07    0.0032      28      84 ..     244     308 ..     232     319 .. 0.85
   2 !  208.8   4.0   1.2e-65     1e-61       1     258 [.     329     596 ..     329     597 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 3.6e-07
  Foie-gras_1  28 eAvrkfrkHiervkdv..vgrrgkgt....lafygweaWearq...asvfAeLieeasipgltslq 84 
                  e++r+++kH +r+k++    r+++++    +++++ ++W  r+   + vfAe+++e++ ++l+s +
   KHJ31183.1 244 EYYRDLSKHCRRKKNKgsFSRPTQYSssaaSQTLSNNGWIFRYdfkLGVFAEFRQEMD-SALRSYE 308
                  89*************9886666766677779**************9***********9.6666555 PP

  == domain 2  score: 208.8 bits;  conditional E-value: 1.2e-65
  Foie-gras_1   1 rfnearlladviaikiirlllsngqpseAvrkfrkHiervkdvvgrrgkgtlafygweaWearqasvfAeLieeasipgltslqtqqstleeq..... 93 
                  r++ear lad+ia++i+r+ll+n++  +Avr+++ H+e++kd+++r g+g  a   w+ W ar+a+++Ae i+++sip+++ l      +e++     
   KHJ31183.1 329 RWVEARNLADIIALRIVRCLLWNQNYGAAVRRWTLHKEQIKDLIDRNGEGP-AVHDWNSWKARWATIMAETISRVSIPEFSGLAKYV-LPEKNfmirg 424
                  9**************************************************.*******************************9654.333448999* PP

  Foie-gras_1  94 ...pwellhhagyyyqlaakhakerrelaeqia......ndpeqspassiassayvydtylapepheeyplsgseekgvahskliidlLekaleeFsk 182
                     pwe lhh+gy+++ a++++ + ++ a+qi+       dp+ ++  +i +s+ + +t ++ +  +++p s++  ++v+ s+li+++L++a+ eF++
   KHJ31183.1 425 dvkPWEYLHHPGYWFRIASNYLIASQNRASQITeetsslLDPS-ESLCRIENSS-ILNTNKSFDISKKNPPSSQ--QSVEYSSLILEFLRRAILEFRQ 518
                  ********************************64333332332.4444443333.3344466666666666665..89******************** PP

  Foie-gras_1 183 rkqtRlaeelsleiAeeylrlgdwkkalellqpl..tlsyrkegWwsLleevlwalrecalkvqdvkdvlavdleLls 258
                  r+q  +++el+l  A+e++r ++w++a+++l+ +  ++ yr+e Ww ++ee+lwalr++a  v+d   +lavd+eL++
   KHJ31183.1 519 RNQFHIVQELQLLSANELVRKESWDEAFKILSNIwkNMPYRNECWWNIVEEILWALRKAAFYVGDAGSILAVDWELMN 596
                  *****************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       464  (0.0258799); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.27s 00:00:01.01 Elapsed: 00:00:00.42
# Mc/sec: 8573.36
//
Query:       KHJ31184.1  [L=473]
Description: putative rxt2-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.4e-48  162.5   2.4    9.8e-48  162.1   0.0    2.3  2  RXT2_N          RXT2-like, N-terminal
  ------ inclusion threshold ------
      0.059   13.1   0.6      0.059   13.1   0.6    2.1  2  DUF2963         Protein of unknown function (DUF2963)


Domain annotation for each model (and alignments):
>> RXT2_N  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.1   0.0   1.1e-51   9.8e-48       1     156 []      36     177 ..      36     177 .. 0.99
   2 ?   -1.4   0.8      0.23   2.1e+03      66      85 ..     438     457 ..     409     470 .. 0.54

  Alignments for each domain:
  == domain 1  score: 162.1 bits;  conditional E-value: 1.1e-51
      RXT2_N   1 tNRGnKLkkkaefvhegrLnsskgdeelkkkveyngserkilsrnpierskrkkkekekeekeeeeedeegdeededdddee....eaeaaeenpykkv 95 
                 tNRGnKL+k+a+fv+eg+L++++g++++++++e++g  r+ils+np+++                  de+g+e+d+ddd+e+     ++aa++npy++v
  KHJ31184.1  36 TNRGNKLRKRARFVREGQLAPPSGPQVYRRTIEHAGFFRDILSQNPPLI------------------DEDGYEIDSDDDEERtqtaLTAAAQLNPYAQV 116
                 8************************************************..................*************9999988899********* PP

      RXT2_N  96 rleelLaPltspsdlithpslsrtykskaLteLalqlieliekEqeslvklkkLlevllGd 156
                 ++e+lLaPlt++s+l++hp+ls++++s++Lt+L+l++ ++i+kE++ l+klk+L+++++Gd
  KHJ31184.1 117 KIEQLLAPLTAASELPNHPTLSKPFTSQTLTNLTLEARDMIQKEKKFLWKLKHLMTRMNGD 177
                 ************************************************************9 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.23
      RXT2_N  66 eedeegdeededdddeeeae 85 
                   d+++ e ded ++ +++e
  KHJ31184.1 438 WYDNDEWELDEDLKKGQDEE 457
                 33333333333332222111 PP

>> DUF2963  Protein of unknown function (DUF2963)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.6   6.6e-06     0.059      19      46 ..      16      41 ..      15      45 .. 0.84
   2 ?   -3.2   0.1      0.81   7.3e+03      33      49 ..     290     306 ..     284     308 .. 0.60

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 6.6e-06
     DUF2963 19 gkkiKrtnYqedGktinsIeeyDdeeek 46
                +k iKr+ Y+ d   +nsI++y + + k
  KHJ31184.1 16 KKAIKRKAYESDS--DNSIDKYTNRGNK 41
                589*********9..*******866655 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.81
     DUF2963  33 tinsIeeyDdeeekike 49 
                 t+n  +  D++ ++i++
  KHJ31184.1 290 TDNASTLVDKNSKLIQK 306
                 55554555677777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (473 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       716  (0.0399353); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 3685.80
//
Query:       KHJ31185.1  [L=295]
Description: putative thioesterase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-08   34.2   0.0    4.2e-08   33.4   0.0    1.3  1  4HBT      Thioesterase superfamily


Domain annotation for each model (and alignments):
>> 4HBT  Thioesterase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   0.0   2.3e-12   4.2e-08       3      64 ..     193     253 ..     192     266 .. 0.90

  Alignments for each domain:
  == domain 1  score: 33.4 bits;  conditional E-value: 2.3e-12
                 SB-HHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEEEEESS-BBTTCEEEEEEEEEEEESSEE CS
        4HBT   3 vvhgGvylallDeaagaalrslggrgilvvvvelsidflrpvrlgdeltvearvlrlgrtsa 64 
                  +hgG +++llDe+++ ++++     ++  ++ l+id++ p   g+ ++v+a+ + ++++ +
  KHJ31185.1 193 LIHGGLLATLLDECLARCCFTAFPN-KIGMTATLNIDYRNPTPAGSYVLVRAKTTDVKGRKV 253
                 58**********************8.*****************************9998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       316  (0.0176251); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2170.99
//
Query:       KHJ31186.1  [L=335]
Description: hypothetical protein EV44_g5820 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 2767.91
//
Query:       KHJ31187.1  [L=175]
Description: putative ubiquitin-like protein smt3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       654  (0.0364772); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1316.54
//
Query:       KHJ31188.1  [L=102]
Description: putative ubiquitin-like modifier [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-17   63.6   0.1    1.3e-17   63.4   0.1    1.1  1  Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
    2.4e-09   36.8   0.1    2.8e-09   36.6   0.1    1.1  1  ubiquitin  Ubiquitin family


Domain annotation for each model (and alignments):
>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.4   0.1   1.4e-21   1.3e-17       5      70 ..      26      91 ..      23      93 .. 0.92

  Alignments for each domain:
  == domain 1  score: 63.4 bits;  conditional E-value: 1.4e-21
                EEESSS-.-EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEE CS
   Rad60-SLD  5 lkgkdgk.evkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidv 70
                +k  d++ ev++k+k+tt+++kL++a+++++g +  ++vr++F+G + ++++ +e ld+ dgdt++v
  KHJ31188.1 26 IKVTDNNnEVFFKIKRTTPLKKLMDAFCERQGKSL-SSVRFLFEGSRVQQTDSPEFLDMADGDTLEV 91
                44455555***************************.******************************9 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.6   0.1   3.1e-13   2.8e-09       2      71 ..      25      95 ..      24      96 .. 0.95

  Alignments for each domain:
  == domain 1  score: 36.6 bits;  conditional E-value: 3.1e-13
                EEEE.TTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEESS CS
   ubiquitin  2 tvkt.ldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlrl 71
                ++k+ ++++++ +++++++ +++l+++ +e++g   ++ r++++G + +   ++e ++++dg+tl+++ ++
  KHJ31188.1 25 NIKVtDNNNEVFFKIKRTTPLKKLMDAFCERQGKSLSSVRFLFEGSRVQQTDSPEFLDMADGDTLEVHQEQ 95
                678878999**********************************************************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 798.14
//
Query:       KHJ31189.1  [L=399]
Description: putative tpr domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-13   49.0   1.9     0.0021   18.0   0.0    5.3  5  TPR_2       Tetratricopeptide repeat
    2.8e-12   46.7   3.6    4.9e-08   33.1   0.2    3.3  3  TPR_12      Tetratricopeptide repeat
    3.6e-12   46.7   4.3    0.00021   21.8   1.3    4.3  4  TPR_16      Tetratricopeptide repeat
    4.1e-12   46.4   2.9    5.3e-06   26.9   0.5    3.7  3  TPR_19      Tetratricopeptide repeat
    1.1e-11   44.5  11.7      0.017   15.9   0.6    5.5  5  TPR_14      Tetratricopeptide repeat
    1.8e-10   40.1   1.8      0.077   12.8   0.1    4.5  4  TPR_1       Tetratricopeptide repeat
    2.2e-10   39.9   0.7      0.001   19.1   0.0    4.5  4  TPR_8       Tetratricopeptide repeat
    1.1e-09   37.6   3.9      0.026   14.5   0.0    5.0  5  TPR_7       Tetratricopeptide repeat
    2.4e-06   26.9   0.0      0.044   13.2   0.0    2.5  2  SHNi-TPR    SHNi-TPR
    7.2e-06   25.6   1.2      0.008   15.6   0.0    2.7  3  TPR_MalT    MalT-like TPR region
    9.8e-06   25.3   1.7       0.16   11.9   0.0    4.0  4  TPR_10      Tetratricopeptide repeat
    3.3e-05   24.0   1.0       0.29   11.6   0.0    4.5  3  TPR_17      Tetratricopeptide repeat
    8.4e-05   22.8   1.0        8.2    7.4   0.2    4.5  4  TPR_4       Tetratricopeptide repeat
     0.0016   18.1   0.4       0.33   10.7   0.1    3.5  5  TPR_11      TPR repeat
     0.0052   16.4   0.2       0.22   11.2   0.1    2.7  3  HrpB1_HrpK  Bacterial type III secretion protein (HrpB1_HrpK)
  ------ inclusion threshold ------
      0.012   15.7   3.4       0.15   12.2   0.4    3.1  3  TPR_9       Tetratricopeptide repeat
      0.028   13.6   2.0       0.65    9.2   0.0    3.2  3  TPR_15      Tetratricopeptide repeat
       0.04   14.1   0.7         11    6.3   0.0    3.9  4  ANAPC3      Anaphase-promoting complex, cyclosome, subunit 3
       0.16   12.7   3.8         82    4.2   0.0    5.1  5  TPR_6       Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.1   0.00097      0.92       2      32 ..      37      67 ..      36      69 .. 0.88
   2 !   18.0   0.0   2.2e-06    0.0021       3      32 ..      76     105 ..      75     106 .. 0.93
   3 !   12.6   0.0   0.00012      0.11       1      30 [.     216     245 ..     216     245 .. 0.94
   4 ?   -0.9   0.0       2.6   2.4e+03       7      31 ..     265     289 ..     263     292 .. 0.86
   5 ?    2.9   0.1      0.15   1.4e+02       4      19 ..     337     352 ..     334     352 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00097
       TPR_2  2 ealynlGlayyklgdyeeAleafekAleldP 32
                ++l +++   ++lgd+e Al + ++Ale   
  KHJ31189.1 37 KVLLAQAAEFLQLGDPEAALPLAKRALEASN 67
                6788999999*****************9765 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 2.2e-06
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldP 32 
                 al+  G++y++lgd + A+++f++A ++d 
  KHJ31189.1  76 ALNLCGEIYIELGDIDSARNFFKQAAAIDN 105
                 78899*********************9985 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 0.00012
       TPR_2   1 aealynlGlayyklgdyeeAleafekAlel 30 
                 ae +  l+++ + ++++ +A++a++++l l
  KHJ31189.1 216 AEPWQTLANIRLSQNRFHDARAALRRSLDL 245
                 6889***********************986 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 2.6
       TPR_2   7 lGlayyklgdyeeAleafekAleld 31 
                 l+++++ +g   + le +e  ++ d
  KHJ31189.1 265 LARLLMDAGMDTDSLEVLENLVAED 289
                 89999****9999999999988877 PP

  == domain 5  score: 2.9 bits;  conditional E-value: 0.15
       TPR_2   4 lynlGlayyklgdyee 19 
                 +  ++l+++k+++ye+
  KHJ31189.1 337 WLKQALILFKQQEYED 352
                 8889**********95 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   0.2   5.2e-11   4.9e-08      14      76 ..      47     105 ..      37     106 .. 0.91
   2 !   12.0   0.0    0.0002      0.19       8      34 ..     221     247 ..     208     253 .. 0.63
   3 ?    0.0   0.1       1.1   1.1e+03      22      41 ..     334     354 ..     328     372 .. 0.65

  Alignments for each domain:
  == domain 1  score: 33.1 bits;  conditional E-value: 5.2e-11
      TPR_12  14 rrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaiae 76 
                 ++lg+ + Al l ++ale+     ++d+++ + +l+  g++y +lg+ + A++++++a ai+ 
  KHJ31189.1  47 LQLGDPEAALPLAKRALEAS----NDDSLNSLPALNLCGEIYIELGDIDSARNFFKQAAAIDN 105
                 59******************....49*********************************9975 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 0.0002
      TPR_12   8 nlaavlrrlgrydeAlellekaleiar 34 
                  la++ + + r+++A++ l+++l++++
  KHJ31189.1 221 TLANIRLSQNRFHDARAALRRSLDLWK 247
                 356666666666666666666666665 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 1.1
      TPR_12  22 Alellekaleia.rrllGpdh 41 
                 ++++l++al ++ ++ +++++
  KHJ31189.1 334 SRQWLKQALILFkQQEYEDER 354
                 566666666666555565555 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   1.3   2.3e-07   0.00021       1      63 [.      40     103 ..      40     107 .. 0.90
   2 !   14.9   0.1   3.4e-05     0.032       3      31 ..     222     250 ..     221     253 .. 0.93
   3 ?    6.2   0.0     0.018        17       3      48 ..     265     307 ..     263     310 .. 0.89
   4 ?    1.1   0.0       0.7   6.6e+02      38      52 ..     338     352 ..     332     363 .. 0.68

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 2.3e-07
      TPR_16   1 lalaraalragdyddAaaaleaalkrdpssPd.aaeAllllgdaalrqgrlaeAaalyraalra 63 
                 la+a ++l++gd+++A++++++al++  ++++    Al+l g+++ ++g+ + A+ +++ a++ 
  KHJ31189.1  40 LAQAAEFLQLGDPEAALPLAKRALEASNDDSLnSLPALNLCGEIYIELGDIDSARNFFKQAAAI 103
                 799*****************888888877777799***********************998765 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 3.4e-05
      TPR_16   3 laraalragdyddAaaaleaalkrdpssP 31 
                 la+++l ++++ dA+aal++ l+++++ P
  KHJ31189.1 222 LANIRLSQNRFHDARAALRRSLDLWKDLP 250
                 89***********************9887 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.018
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqg 48 
                 lar++++ag  +d +++le +++ d      +e ++l g++++  g
  KHJ31189.1 265 LARLLMDAGMDTDSLEVLENLVAED---DTSVEVWYLGGWCLYIIG 307
                 89999999999**************...77889********99766 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.7
      TPR_16  38 lllgdaalrqgrlae 52 
                 l  ++++++q+++++
  KHJ31189.1 338 LKQALILFKQQEYED 352
                 455555555555554 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.5   5.6e-09   5.3e-06       2      54 ..      47     103 ..      46     107 .. 0.84
   2 !   14.0   0.2     6e-05     0.056      15      52 ..     206     243 ..     195     251 .. 0.83
   3 ?    3.3   0.0      0.13   1.2e+02      29      59 ..     263     293 ..     257     301 .. 0.82

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 5.6e-09
      TPR_19   2 laegdyaeAlalleqalqedpk....naearllLAeallalgqldeAealLdalpee 54 
                 l+ gd+++Al+l ++al+++++    ++ a+ l  e++++lg++d A++  +++ + 
  KHJ31189.1  47 LQLGDPEAALPLAKRALEASNDdslnSLPALNLCGEIYIELGDIDSARNFFKQAAAI 103
                 788****************999888444444456****************9998765 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 6e-05
      TPR_19  15 eqalqedpknaearllLAeallalgqldeAealLdalp 52 
                 ++a   +p++ae +  LA++ l+++++ +A+a+L + +
  KHJ31189.1 206 TEATLVAPEYAEPWQTLANIRLSQNRFHDARAALRRSL 243
                 4455569***************************9876 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.13
      TPR_19  29 llLAeallalgqldeAealLdalpeedpdda 59 
                   LA++l+ +g  ++  ++L+ l +ed  + 
  KHJ31189.1 263 VSLARLLMDAGMDTDSLEVLENLVAEDDTSV 293
                 56999******99999999999999987654 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.6   1.8e-05     0.017       2      34 ..      37      69 ..      36      72 .. 0.89
   2 !    8.4   0.0    0.0047       4.5       6      30 ..      79     103 ..      74     107 .. 0.86
   3 !   12.7   0.2   0.00019      0.18       2      33 ..     217     248 ..     216     252 .. 0.91
   4 !   10.0   0.0    0.0014       1.3       6      40 ..     264     298 ..     261     300 .. 0.93
   5 ?    0.2   0.2         2   1.9e+03      12      31 ..     353     373 ..     334     378 .. 0.58

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.8e-05
      TPR_14  2 eallalaeallalGdpdeAiallrralalaPdd 34
                ++lla a+ +l+lGdp++A+ l++ral++  dd
  KHJ31189.1 37 KVLLAQAAEFLQLGDPEAALPLAKRALEASNDD 69
                678999999*******************98887 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0047
      TPR_14   6 alaeallalGdpdeAiallrralal 30 
                 + +e++ +lGd d A++ +++a a 
  KHJ31189.1  79 LCGEIYIELGDIDSARNFFKQAAAI 103
                 56899****************9886 PP

  == domain 3  score: 12.7 bits;  conditional E-value: 0.00019
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPd 33 
                 e ++ la + l + ++ +A+a+lrr l+l+ d
  KHJ31189.1 217 EPWQTLANIRLSQNRFHDARAALRRSLDLWKD 248
                 6799***********************98876 PP

  == domain 4  score: 10.0 bits;  conditional E-value: 0.0014
      TPR_14   6 alaeallalGdpdeAiallrralalaPddaeawll 40 
                  la++l+ +G   +++++l+ ++a + ++ e+w+l
  KHJ31189.1 264 SLARLLMDAGMDTDSLEVLENLVAEDDTSVEVWYL 298
                 59******************************975 PP

  == domain 5  score: 0.2 bits;  conditional E-value: 2
      TPR_14  12 lalGdpd.eAiallrralala 31 
                 ++lGd++ e + +l++ l++ 
  KHJ31189.1 353 ERLGDHArEILGILNAQLEKE 373
                 455655325666777666665 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   0.00041      0.38       2      29 ..      37      64 ..      36      69 .. 0.88
   2 !   12.8   0.1   8.2e-05     0.077       3      31 ..      76     104 ..      75     106 .. 0.93
   3 !    9.4   0.0     0.001      0.95       2      30 ..     217     245 ..     216     249 .. 0.89
   4 ?    3.5   0.0     0.073        69       3      19 ..     336     352 ..     334     352 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00041
                HHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1  2 kalynlGnayfklgkydeAleyyekALe 29
                k+l   ++ +++lg+++ Al   ++ALe
  KHJ31189.1 37 KVLLAQAAEFLQLGDPEAALPLAKRALE 64
                566777999******************9 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 8.2e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALeln 31 
                 al+  G +y +lg+ d A  ++++A  ++
  KHJ31189.1  76 ALNLCGEIYIELGDIDSARNFFKQAAAID 104
                 78999********************9887 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.001
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALel 30 
                 + +  l+n+ ++++++ +A ++ ++ L l
  KHJ31189.1 217 EPWQTLANIRLSQNRFHDARAALRRSLDL 245
                 66888**********************98 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.073
                 HHHHHHHHHHHTT-HHH CS
       TPR_1   3 alynlGnayfklgkyde 19 
                  +   ++++fk+++y++
  KHJ31189.1 336 QWLKQALILFKQQEYED 352
                 58889**********95 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0065       6.1       8      33 ..      43      68 ..      36      69 .. 0.82
   2 !   19.1   0.0   1.1e-06     0.001       2      32 ..      75     105 ..      74     106 .. 0.90
   3 !    8.3   0.0    0.0032         3       1      30 [.     216     245 ..     216     247 .. 0.93
   4 ?   -1.5   0.1       4.4   4.1e+03       4      18 ..     337     351 ..     335     352 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0065
                HHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  8 gsiylklgdyeeAkeyyekaleldpd 33
                +   l+lgd e+A    ++ale++ d
  KHJ31189.1 43 AAEFLQLGDPEAALPLAKRALEASND 68
                555789****************9987 PP

  == domain 2  score: 19.1 bits;  conditional E-value: 1.1e-06
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldp 32 
                 +a+++ g iy++lgd+++A  ++++a  +d 
  KHJ31189.1  75 PALNLCGEIYIELGDIDSARNFFKQAAAIDN 105
                 678888********************99986 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.0032
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekalel 30 
                 ae ++ l++i l++++++ A +++++ l+l
  KHJ31189.1 216 AEPWQTLANIRLSQNRFHDARAALRRSLDL 245
                 57799*********************9986 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 4.4
                 HHHHHHHHHHTT-HH CS
       TPR_8   4 yynlgsiylklgdye 18 
                 +++ ++i++k+++ye
  KHJ31189.1 337 WLKQALILFKQQEYE 351
                 788899999999998 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1     0.011        11       9      32 ..      46      69 ..      38      73 .. 0.79
   2 !   14.5   0.0   2.7e-05     0.026       1      32 [.      76     107 ..      76     111 .. 0.90
   3 !   11.2   0.1   0.00032      0.31       5      32 ..     222     249 ..     219     253 .. 0.92
   4 ?    2.7   0.0      0.16   1.5e+02       4      33 ..     264     291 ..     261     294 .. 0.86
   5 ?   -2.2   0.0       6.3   5.9e+03       6      16 ..     341     351 ..     338     352 .. 0.67

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.011
       TPR_7  9 ysrlGdyeeAielyeqsLaltkdp 32
                + +lGd e A+ l +++L+  +d+
  KHJ31189.1 46 FLQLGDPEAALPLAKRALEASNDD 69
                678*************88766665 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 2.7e-05
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdp 32 
                 aL+  +++y +lGd + A  +++q+ a++++ 
  KHJ31189.1  76 ALNLCGEIYIELGDIDSARNFFKQAAAIDNEG 107
                 7999********************99998875 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 0.00032
       TPR_7   5 LarlysrlGdyeeAielyeqsLaltkdp 32 
                 La+++ +++++ +A   +++sL l+kd 
  KHJ31189.1 222 LANIRLSQNRFHDARAALRRSLDLWKDL 249
                 9************************997 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.16
       TPR_7   4 nLarlysrlGdyeeAielyeqsLaltkdpe 33 
                  Larl  + G   + +e++e    +++d++
  KHJ31189.1 264 SLARLLMDAGMDTDSLEVLEN--LVAEDDT 291
                 79******************9..7777766 PP

  == domain 5  score: -2.2 bits;  conditional E-value: 6.3
       TPR_7   6 arlysrlGdye 16 
                 a + +++++ye
  KHJ31189.1 341 ALILFKQQEYE 351
                 55677777777 PP

>> SHNi-TPR  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   4.7e-05     0.044       2      21 ..      82     101 ..      82     102 .. 0.95
   2 !   10.9   0.0   0.00026      0.24       6      30 ..     221     245 ..     219     247 .. 0.95

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 4.7e-05
    SHNi-TPR   2 dvydlLGEislEnenFpqAv 21 
                 ++y+ LG+i+  +++F+qA+
  KHJ31189.1  82 EIYIELGDIDSARNFFKQAA 101
                 79*****************8 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00026
    SHNi-TPR   6 lLGEislEnenFpqAveDlrkaLeL 30 
                 +L++i l +++F++A   lr++L+L
  KHJ31189.1 221 TLANIRLSQNRFHDARAALRRSLDL 245
                 69*********************98 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   8.5e-06     0.008       5      69 ..      38     103 ..      36     111 .. 0.82
   2 !    8.0   0.1    0.0017       1.6     174     267 ..     195     286 ..     173     295 .. 0.47
   3 ?   -2.7   0.0       3.2     3e+03     178     196 ..     332     350 ..     328     370 .. 0.61

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 8.5e-06
    TPR_MalT   5 alrAlla..iasgdaeralelArqALallpeddllariaatavlGeasllqGdleaAlqalqeaekl 69 
                 +l A+ a  ++ gd+e+al lA++AL+ + +d  l ++ a+ + Ge++   Gd ++A++ +++a ++
  KHJ31189.1  38 VLLAQAAefLQLGDPEAALPLAKRALEASNDDS-LNSLPALNLCGEIYIELGDIDSARNFFKQAAAI 103
                 555666655899***************998888.5566666777*****************999765 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0017
    TPR_MalT 174 qGdleeAetllekaeelaresnfhvdwlanaeevrvrlwlaqgdlaaaerwleaa.....elpsdddnhflelelrn.larvllalgrydeAlellerL 266
                  +  +++e+l+ +a+ +a e   + + lan     +r  l q++  +a+++l+ +      lp ++d  + e+  r+ lar+l+ +g   + le+le+L
  KHJ31189.1 195 ENAEQKCEALITEATLVAPEYAEPWQTLAN-----IR--LSQNRFHDARAALRRSldlwkDLP-SQDPIIPEYPTRVsLARLLMDAGMDTDSLEVLENL 285
                 444555555555555555544443222222.....22..233333333333333322111111.11223333444333555555555555555555555 PP

    TPR_MalT 267 l 267
                 +
  KHJ31189.1 286 V 286
                 5 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 3.2
    TPR_MalT 178 eeAetllekaeelaresnf 196
                 + + ++l++a  l +++++
  KHJ31189.1 332 KSSRQWLKQALILFKQQEY 350
                 5555555555555555554 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1     0.067        63      14      31 ..      48      65 ..      43      67 .. 0.90
   2 !    6.4   0.0    0.0092       8.6       9      31 ..      81     103 ..      76     106 .. 0.89
   3 !   11.9   0.0   0.00017      0.16       8      35 ..     222     249 ..     220     256 .. 0.89
   4 ?   -2.4   0.0       5.4   5.1e+03      21      31 ..     334     344 ..     331     352 .. 0.65

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.067
      TPR_10 14 qrgrydeAealleealai 31
                q+g+ ++A+ l+++al++
  KHJ31189.1 48 QLGDPEAALPLAKRALEA 65
                89**************86 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0092
      TPR_10   9 analrqrgrydeAealleealai 31 
                 + ++ ++g+ d A++++++a ai
  KHJ31189.1  81 GEIYIELGDIDSARNFFKQAAAI 103
                 78999***************987 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 0.00017
      TPR_10   8 LanalrqrgrydeAealleealairrrl 35 
                 Lan+  +++r+++A+a l+++l++++ l
  KHJ31189.1 222 LANIRLSQNRFHDARAALRRSLDLWKDL 249
                 899999*******************987 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 5.4
      TPR_10  21 Aealleealai 31 
                 ++++l++al +
  KHJ31189.1 334 SRQWLKQALIL 344
                 56777777755 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1      0.41   3.9e+02       3      33 ..      60      94 ..      58      95 .. 0.70
   2 !   11.6   0.0    0.0003      0.29       4      33 ..     207     236 ..     204     237 .. 0.87
   3 ?    5.4   0.0     0.029        27       3      29 ..     283     309 ..     281     316 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.41
      TPR_17  3 lkaleldPnn....adaynnLAelllknGdlmtAr 33
                ++ale   ++     +a+n+ +e++ ++Gd + Ar
  KHJ31189.1 60 KRALEASNDDslnsLPALNLCGEIYIELGDIDSAR 94
                56666644444445788888899999999999886 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.0003
      TPR_17   4 kaleldPnnadaynnLAelllknGdlmtAr 33 
                 +a    P +a++++ LA++ l+++++ +Ar
  KHJ31189.1 207 EATLVAPEYAEPWQTLANIRLSQNRFHDAR 236
                 566667********************9998 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.029
      TPR_17   3 lkaleldPnnadaynnLAelllknGdl 29 
                 ++ ++ d ++++++++ +++l+ +G++
  KHJ31189.1 283 ENLVAEDDTSVEVWYLGGWCLYIIGEK 309
                 566777899*************99975 PP

>> TPR_4  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.2    0.0086       8.2       4      24 ..      39      59 ..      36      61 .. 0.84
   2 ?    4.6   0.0     0.068        64       3      22 ..      76      95 ..      74      99 .. 0.85
   3 ?    4.8   0.3     0.057        54       7      26 .]     222     241 ..     221     241 .. 0.86
   4 ?    0.3   0.0       1.6   1.5e+03       3      15 ..     261     273 ..     260     282 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0086
       TPR_4  4 llaLArallalGdldeArall 24
                lla+A   l+lGd+++A+ l+
  KHJ31189.1 39 LLAQAAEFLQLGDPEAALPLA 59
                678888889*********987 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.068
       TPR_4  3 allaLArallalGdldeAra 22
                al + ++ + +lGd d Ar 
  KHJ31189.1 76 ALNLCGEIYIELGDIDSARN 95
                5667899***********95 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.057
       TPR_4   7 LArallalGdldeAraller 26 
                 LA   l + ++ +Ara+l+r
  KHJ31189.1 222 LANIRLSQNRFHDARAALRR 241
                 677778899**********8 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 1.6
       TPR_4   3 allaLArallalG 15 
                 +++ LAr+l ++G
  KHJ31189.1 261 TRVSLARLLMDAG 273
                 5789*****9998 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       5.6   5.3e+03       4      22 ..      46      64 ..      45      69 .. 0.64
   2 !   10.7   0.1   0.00035      0.33       1      25 [.      81     105 ..      81     107 .. 0.95
   3 ?    3.1   0.0     0.083        79       2      28 ..     224     250 ..     223     251 .. 0.88
   4 ?   -3.4   0.0       8.7   8.2e+03       6      32 ..     271     297 ..     267     298 .. 0.75
   5 ?   -1.4   0.1         2   1.9e+03       3      11 ..     343     351 ..     336     352 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 5.6
      TPR_11  4 yyeqGkyeeAieaYkkAlk 22
                + ++G+ e+A+   k+Al+
  KHJ31189.1 46 FLQLGDPEAALPLAKRALE 64
                6678888888755566666 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00035
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldP 25 
                 G +y e+G+++ A + +k+A ++d+
  KHJ31189.1  81 GEIYIELGDIDSARNFFKQAAAIDN 105
                 89*********************97 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.083
      TPR_11   2 dayyeqGkyeeAieaYkkAlkldPdna 28 
                 ++  +q+++ +A +a+++ l+l  d +
  KHJ31189.1 224 NIRLSQNRFHDARAALRRSLDLWKDLP 250
                 8999***************99977766 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 8.7
      TPR_11   6 eqGkyeeAieaYkkAlkldPdnaeayy 32 
                 + G  ++++e++++ ++ d +++e++y
  KHJ31189.1 271 DAGMDTDSLEVLENLVAEDDTSVEVWY 297
                 566667888888888888888888888 PP

  == domain 5  score: -1.4 bits;  conditional E-value: 2
      TPR_11   3 ayyeqGkye 11 
                 ++++q++ye
  KHJ31189.1 343 ILFKQQEYE 351
                 789999998 PP

>> HrpB1_HrpK  Bacterial type III secretion protein (HrpB1_HrpK)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       6.3     6e+03      52      71 ..      81     100 ..      76     107 .. 0.81
   2 !   11.2   0.1   0.00023      0.22      10      69 ..     176     240 ..     168     248 .. 0.84
   3 ?    2.1   0.0      0.15   1.4e+02      52      96 ..     266     310 ..     257     324 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 6.3
  HrpB1_HrpK  52 gvlliergrweeAlrlLrev 71 
                 g ++ie g+++ A+  +++ 
  KHJ31189.1  81 GEIYIELGDIDSARNFFKQA 100
                 67899999999999888876 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00023
  HrpB1_HrpK  10 lvggLievlslal.....asedtedaellLdalrvLrPevaeldllegvlliergrweeAlrlLr 69 
                 l g+L +v+ + +     ++++ +  e+l+ +  +  Pe ae     ++++++++r+++A+ +Lr
  KHJ31189.1 176 LAGALCSVIEVYMtdlswEENAEQKCEALITEATLVAPEYAEPWQTLANIRLSQNRFHDARAALR 240
                 5566655555555555888999999************************************9998 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.15
  HrpB1_HrpK  52 gvlliergrweeAlrlLreveaeasgtpyakaLlAlcLaalrDee 96 
                 + ll+  g  ++ l +L+++ ae      +  L  +cL++ ++++
  KHJ31189.1 266 ARLLMDAGMDTDSLEVLENLVAEDDTSVEVWYLGGWCLYIIGEKQ 310
                 78899999999**********99999999999******9988776 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.2       1.4   1.3e+03      40      58 ..      47      65 ..      40      71 .. 0.72
   2 ?    1.9   0.0      0.27   2.6e+02      36      61 ..      81     106 ..      78     112 .. 0.86
   3 ?   12.2   0.4   0.00016      0.15      10      58 ..     197     245 ..     191     269 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1.4
       TPR_9 40 aqlGclsaAladLeaylal 58
                 qlG+++aAl    ++l+ 
  KHJ31189.1 47 LQLGDPEAALPLAKRALEA 65
                6999999998765555555 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.27
       TPR_9  36 GlllaqlGclsaAladLeaylalapd 61 
                 G ++ +lG++  A++ + +++a++ +
  KHJ31189.1  81 GEIYIELGDIDSARNFFKQAAAIDNE 106
                 789************99999988765 PP

  == domain 3  score: 12.2 bits;  conditional E-value: 0.00016
       TPR_9  10 dweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylal 58 
                   +++ a +    l+aP+ +e +   + ++  +++++ A+a+L + l+l
  KHJ31189.1 197 AEQKCEALITEATLVAPEYAEPWQTLANIRLSQNRFHDARAALRRSLDL 245
                 55666777777889******************************98865 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00069      0.65     141     180 ..      31      70 ..      23      99 .. 0.84
   2 ?    0.5   0.2       0.3   2.8e+02      42     173 ..     214     243 ..     188     256 .. 0.60
   3 ?    0.8   0.0      0.25   2.4e+02       9      48 ..     260     297 ..     248     300 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00069
      TPR_15 141 aaeqsaafllaraelyrqegqtdaAlrdyreAlalapdss 180
                 ++  s+ +lla a+  +q g+++aAl ++++Al+++ d+s
  KHJ31189.1  31 KLFVSPKVLLAQAAEFLQLGDPEAALPLAKRALEASNDDS 70 
                 5556889999999999999999999999999999988876 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.3
      TPR_15  42 kdteyWrtladLAwalqqedearkAyrqLlasgkaraedyerliellydaepkeaarlaekgwrrfrsprlLssalellerakdydriaellksleeee 140
                 + +e W+tla+   ++ ++++ar+A+r+                                                                       
  KHJ31189.1 214 EYAEPWQTLANIRLSQNRFHDARAALRR----------------------------------------------------------------------- 241
                 3344466666666666666666666555....................................................................... PP

      TPR_15 141 aaeqsaafllaraelyrqegqtdaAlrdyreAl 173
                                                 l
  KHJ31189.1 242 -------------------------------SL 243
                 ...............................33 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.25
      TPR_15   9 nealklatllykqgdvkkAlevLkeaaqkaapskdteyWr 48 
                  +++ la+ll++ g    +levL++ +++   ++  e+W+
  KHJ31189.1 260 PTRVSLARLLMDAGMDTDSLEVLENLVAED--DTSVEVWY 297
                 478999*****************7665555..45567776 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0     0.012        11      11      80 ..      58      98 ..      37     107 .. 0.59
   2 ?    0.5   0.0      0.77   7.2e+02      29      80 ..     222     240 ..     195     245 .. 0.64
   3 ?    1.2   0.0      0.45   4.3e+02      40      71 ..     276     308 ..     261     313 .. 0.76
   4 ?   -0.2   0.0       1.2   1.2e+03      26      40 ..     335     351 ..     326     352 .. 0.73

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.012
                HHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3 11 laerllaaetespedayllAlclylngqykrAyellrkaklnskslgcrylfAqcllkLkkyeeAiaaLe 80
                la r+l                           e  ++     +sl ++ l+++ +++L+ ++ A++ ++
  KHJ31189.1 58 LAKRAL---------------------------EASNDD--SLNSLPALNLCGEIYIELGDIDSARNFFK 98
                444444...........................333333..33444666666666666666666665544 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.77
                 HHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3  29 lAlclylngqykrAyellrkaklnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                 lA   +++                                 +++++A+aaL 
  KHJ31189.1 222 LANIRLSQ---------------------------------NRFHDARAALR 240
                 44444555.................................55555555554 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.45
                 HHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT- CS
      ANAPC3  40 krAyellrka.klnskslgcrylfAqcllkLkk 71 
                 +  +e+l+++  ++++s +++yl + cl+ +++
  KHJ31189.1 276 TDSLEVLENLvAEDDTSVEVWYLGGWCLYIIGE 308
                 556788999999999999*****9999998754 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 1.2
                 HHHH..HHHHHHTT-HH CS
      ANAPC3  26 ayll..Alclylngqyk 40 
                 + +l  Al l+++++y+
  KHJ31189.1 335 RQWLkqALILFKQQEYE 351
                 55655688899988886 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1       1.7   1.6e+03      10      27 ..      46      63 ..      38      65 .. 0.65
   2 ?    4.2   0.0     0.087        82       7      26 ..      81     100 ..      81     103 .. 0.90
   3 ?    1.0   0.0      0.89   8.4e+02       7      25 ..     223     241 ..     222     246 .. 0.83
   4 ?    1.7   0.0      0.54   5.1e+02       6      29 ..     265     288 ..     263     292 .. 0.84
   5 ?    0.0   0.1       1.8   1.7e+03       4      17 ..     338     351 ..     337     360 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 1.7
                HHHHHHHHHHHHHHHHHH CS
       TPR_6 10 yrklgdtdkAlealerli 27
                +++lgd+++Al + +r +
  KHJ31189.1 46 FLQLGDPEAALPLAKRAL 63
                334689999998887766 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.087
                 HHHHHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAlealerl 26 
                 ++ y++lgd d A+  +++ 
  KHJ31189.1  81 GEIYIELGDIDSARNFFKQA 100
                 789***99********9986 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.89
                 HHHHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAlealer 25 
                 a  ++++++  +A++al+r
  KHJ31189.1 223 ANIRLSQNRFHDARAALRR 241
                 6778889999*******98 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.54
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealerlike 29 
                 la+++  +g  +++le le+l+ e
  KHJ31189.1 265 LARLLMDAGMDTDSLEVLENLVAE 288
                 6888888889999********987 PP

  == domain 5  score: 0.0 bits;  conditional E-value: 1.8
                 HHHHHHHHHHHHHH CS
       TPR_6   4 yklalsyrklgdtd 17 
                 +k+al ++k+++++
  KHJ31189.1 338 LKQALILFKQQEYE 351
                 799******86776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       752  (0.0419432); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3085.58
//
Query:       KHJ31190.1  [L=463]
Description: putative mfs transporter protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.3e-32  110.5  31.1    8.3e-32  110.5  31.1    1.4  2  MFS_1     Major Facilitator Superfamily
  ------ inclusion threshold ------
      0.031   14.3   2.1      0.099   12.7   0.8    2.5  2  MASE2     MASE2 domain


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.5  31.1   9.3e-36   8.3e-32       2     352 ..      15     385 ..      14     386 .. 0.79
   2 ?   -3.6   0.0      0.44     4e+03     159     175 ..     410     426 ..     404     445 .. 0.58

  Alignments for each domain:
  == domain 1  score: 110.5 bits;  conditional E-value: 9.3e-36
       MFS_1   2 llaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlgag 100
                 ++++++ +++r+++g a      +dl++++  ++ +lt++++ ++++ +p+      +G+ +++ l+ l+f++++l ++f+++l    v+r+l G++++
  KHJ31190.1  15 AILYLFCFIDRANVGNAKLAGFEKDLQMTGYDFNKMLTAFYISYVIFEIPGNLTCKWMGPGWFIPLSSLGFGVCSLSMAFVQNLVSASVVRFLIGAFES 113
                 6788899999999888888899999**99*********************************************888888788889************* PP

       MFS_1 101 alfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg......Wravfyilaivsllafvlfllllpeepperkrkspkeee..... 188
                 a++p++a+++++w+ ++e ++ ++l+ +++ ++ ++g ll++ ++   +      Wr++f + +++++l++++ l+ ++++p + ++ +++e+      
  KHJ31190.1 114 AMLPGIAYYLSRWYRRRELAFRLSLYIVMAPIAGAFGGLLASGILKISSvgsihgWRLIFAVEGLITCLVAIVSLFTMTDRPETASWLTQEEKNlcylr 212
                 *************************************999998885555669999*****************888888999999999988888799766 PP

       MFS_1 189 ...kgtgpaplvp............awkallkdpvlwillialllfffgfsglltllplylqevlglsglllaglllallalvgailallagrlsdrlg 272
                           lv+            + + ++++  +    ++++l+ + ++g+++++p+ + + +  s++++  l    ++lvga++ +l+  ls+++ 
  KHJ31190.1 213 tksD------LVSeaefldkinkkkLMRGIFNPITIP-TAFIFFLINITVQGFSFFTPTVVSTIYPSSSVISQQLRTVPPYLVGAFFTVLIPLLSTKFD 304
                 6552......222343333433333334444444333.56666666667788*******9888888886677777799*******************99 PP

       MFS_1 273 rrrrlll.allllllaalglallavtssavllllvlvliGfglgfvfpsllalasdla.ppeeagtasglfntagslggalg 352
                 +r++ ++ + +l++++++ ++ ++  ++++ ++ + +++  g++++ ++ +al+s ++ +  ++  a++ ++++gslgg+++
  KHJ31190.1 305 NRIIFFIlSAPLMIIGYIVFVATSINDNKIRYI-ATFFAASGSFCFAALCNALVSANViSDTARSGAMATTGMFGSLGGLIA 385
                 944433303333344444444444445555554.55555558888888888888777767777888999999********98 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.44
       MFS_1 159 ivsllafvlfllllpee 175
                  ++l+++vl ++  +++
  KHJ31190.1 410 TILLISIVLLWWMKFDN 426
                 34444445433333444 PP

>> MASE2  MASE2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.8   1.1e-05     0.099       8      77 ..      83     153 ..      80     163 .. 0.91
   2 ?   -3.0   0.0      0.91   8.2e+03      28      46 ..     283     301 ..     269     313 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.1e-05
       MASE2   8 lGlllgaliiaaglleqhfslalllllvlnallwPhlayllar.rsrdplrteqrlLliDallgGlwialm 77 
                 lG+++++l++a + +   +s++  l+ ++ + + P +ay+l+r  +r+ l ++  l ++ a ++G++ +l+
  KHJ31190.1  83 LGFGVCSLSMAFVQNLVSASVVRFLIGAFESAMLPGIAYYLSRwYRRRELAFRLSLYIVMAPIAGAFGGLL 153
                 8******************************************9888899999999999999999988776 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.91
       MASE2  28 lalllllvlnallwPhlay 46 
                 +  +l+ +++ +l P+l  
  KHJ31190.1 283 VPPYLVGAFFTVLIPLLST 301
                 4455555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       776  (0.0432818); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 3483.71
//
Query:       KHJ31191.1  [L=316]
Description: hypothetical protein EV44_g3218 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       599  (0.0334096); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2366.63
//
Query:       KHJ31192.1  [L=175]
Description: hypothetical protein EV44_g0051 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.016   15.1   1.3       0.02   14.8   1.3    1.0  1  SPX       SPX domain


Domain annotation for each model (and alignments):
>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   1.3   1.1e-06      0.02      23     133 ..      36     159 ..      30     168 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.1e-06
         SPX  23 kqLKKlIk..kvqreleslgleaetlrellnrpedskkksse...........rtepstsaaadesgnsaadasssepkdeaeslprrsplsrssrsss 108
                 + LKK+Ik  k++++ ++  le+ + ++ l++ +     + +            ++p +s++++ ++ + +  +s++pk+++ +l++ +p  ++s ss+
  KHJ31192.1  36 RDLKKKIKlaKLEAANKETDLEKLVGQRPLDEGDLFGVRAIQagffggvtqscPNSPVPSRSSSLNSLEIKYCESHSPKPSPCRLEPPRPTCNISLSSR 134
                 679*****77777766777777777777777777666666669******99887777777777777777777777777777778888888877777777 PP

         SPX 109 sygglvssppsansssssddssesn 133
                   ++++++++s ++s+ s+++++sn
  KHJ31192.1 135 KTSASSQRSSSGSDSNISSHPENSN 159
                 7777777777777777777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       767  (0.0427799); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1255.40
//
Query:       KHJ31193.1  [L=937]
Description: putative leucyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-51  175.8   0.3    1.4e-18   66.5   0.5    6.0  5  tRNA-synt_1    tRNA synthetases class I (I, L, M and V)
    2.3e-38  131.6   0.0    6.1e-38  130.2   0.0    1.8  1  tRNA-synt_1_2  Leucyl-tRNA synthetase, Domain 2
    8.3e-27   93.9   0.5    7.9e-20   71.0   0.0    4.7  5  tRNA-synt_1g   tRNA synthetases class I (M)
    2.3e-13   50.4   0.2    6.3e-13   49.0   0.2    1.8  1  Anticodon_1    Anticodon-binding domain of tRNA
     0.0009   18.3   0.0     0.0016   17.5   0.0    1.3  1  tRNA-synt_1d   tRNA synthetases class I (R)
     0.0012   18.2   0.0      0.051   12.9   0.0    2.6  3  tRNA-synt_1e   tRNA synthetases class I (C) catalytic domain
  ------ inclusion threshold ------
       0.17   11.3   2.9        2.3    7.8   0.3    2.5  2  zf-ribbon_3    zinc-ribbon domain
       0.47   10.6   1.3        1.9    8.7   0.0    2.6  3  Zn-ribbon_8    Zinc ribbon domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.5   0.5   6.3e-22   1.4e-18      32     178 ..       8     137 ..       2     140 .. 0.92
   2 !   14.6   0.0   3.3e-06    0.0074     360     413 ..     138     194 ..     134     199 .. 0.83
   3 !   34.3   0.0   3.7e-12   8.2e-09     187     351 ..     199     389 ..     195     397 .. 0.83
   4 !   33.7   0.0   5.3e-12   1.2e-08     416     557 ..     398     561 ..     390     570 .. 0.70
   5 !   17.9   0.0   3.2e-07   0.00073     562     599 ..     601     639 ..     594     642 .. 0.87

  Alignments for each domain:
  == domain 1  score: 66.5 bits;  conditional E-value: 6.3e-22
  tRNA-synt_1  32 PyvtGslHiGhalaktlkdivirykrmkGkevlyvpGwDhaGlaiea.kvekklgakekkerkklgreefrekvrewkaeyaeeirkqvkrlGvsvDf 128
                  Py  G lH+Gh    t+ d++ r++rm G++v + +GwD  Gl+ e  ++e+ +  +                 ++w ++ +e++++q++++    D+
   KHJ31193.1   8 PYPSGDLHLGHLRVYTISDVLSRFYRMCGYNVIHPIGWDAFGLPAENaAIERGI--D----------------PKSWTEQNIEKMKNQLEDMNGYWDW 87 
                  999*****************************************9862466665..2................3689********************* PP

  tRNA-synt_1 129 dreylTldkeleeavkevfvrladkgliyrgkklvnwstklktalselEv 178
                  +re +T d+ + + +++ f+ l++kgl y++k  vn+++  +t+l++  v
   KHJ31193.1  88 EREFKTCDPTFYKHTQRLFTLLYKKGLAYQSKSYVNFDPIDQTVLANEQV 137
                  **********************************************9776 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 3.3e-06
  tRNA-synt_1 360 hsvpfcerskkpiiyrateqWfvrvkeladaalkave...kvqfvpkskekryaswl 413
                   s++f++rs++ ++ r+ +qW+ r+++ ++++l+ +    k +  p++  ++ ++w+
   KHJ31193.1 138 DSYGFSWRSGAKVEKRSLKQWYFRISKYRQELLDGLLllgKDKAWPERVLSMQKNWI 194
                  58****************************999987666666777777777777776 PP

  == domain 3  score: 34.3 bits;  conditional E-value: 3.7e-12
  tRNA-synt_1 187 lihvafpladkee...vklviaTTtPeTllgdtavavnpeldyvitkeklilaeallkslvkkesekkiledergkeLegkevelpl.........vn 272
                    +++f++ ++++    ++++ TT+  T++g + +a++     v+ ++   + + +l+ +++++s+  +  ++   eL + ++++pl         v+
   KHJ31193.1 199 GAQIKFDVIADNSssyHSIEVFTTRLDTIFGVQYLALALTHPIVK-QQ--AMTDLKLQDFIRAQSNFSLDSKFG-YELPKIKAINPLahekitsekVK 292
                  56899**96666556689*************99888887744443.33..356677788888777777766664.47888888888888888887789 PP

  tRNA-synt_1 273 rkipiiaddyvdkeaGtGvVkiaPahdedDyevgkkynl..................evinildedgtlteeaaefeglkvfdarkkvveelkekgl 351
                    +pi a  yv  + G G+V   Pahd  D++  +++                    +++ + +++g lt+e++ f+ ++  +a+k +++ l+  g+
   KHJ31193.1 293 APLPIFAAPYVLGDVGNGAVMGVPAHDIRDHAFWEQNRPgnsihcvvtsnpnqqltePTVIPFTNHGYLTNECGPFSNMTSLKANKEILNLLRSSGR 389
                  999****************************998887666667999*********999999*******************************99886 PP

  == domain 4  score: 33.7 bits;  conditional E-value: 5.3e-12
  tRNA-synt_1 416 iqdWciSRqrwWGhriplfvsketeevvvreelkelva...greeeeaekkalekeakdkl....kkekgelekdedvlDvWFsSgswpfstlgypee 506
                   +dW +SRqr+WG++ip+   ++ + v v ++   ++    +   e+++k +  +ea d +     +   + ++d+d++D+  +S+      l+ p++
   KHJ31193.1 398 LRDWLVSRQRYWGTPIPIVHCDHCGPVAVPDDQLPVELppfAAHWEKRRKGNPLREAYDWInticPSCGSKAKRDTDTMDTFVDSSWYYLRFLD-PQN 494
                  69*************************998877666541113344455555566777777777775566789*************999999999.776 PP

  tRNA-synt_1 507 dt.....eelkkffpadmlleGlDiirgWv..arli...llslaltgse......Pfkevlvhglvr 557
                  ++     e  k+  p d+++ G+      +  +r i   l  ++l+ s+      Pfk +l++g+v 
   KHJ31193.1 495 KNeflslETAKTSLPVDIYVGGVEHAILHLlySRFIykfLSDTHLKPSVakkisePFKILLTQGMVH 561
                  331222234577899*******986544431022221113445555555777777999999999986 PP

  == domain 5  score: 17.9 bits;  conditional E-value: 3.2e-07
  tRNA-synt_1 562 rKmSKslgNvidpldvikkygadalRltli.lsdvgrdi 599
                   KmSKs+ N ++p+   +kygada+R  ++ +++ ++ +
   KHJ31193.1 601 EKMSKSKYNGVNPTICREKYGADAMRAHILfQAPITEVL 639
                  5*************************9998677766655 PP

>> tRNA-synt_1_2  Leucyl-tRNA synthetase, Domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.2   0.0   2.7e-41   6.1e-38       1     182 [.     191     382 ..     191     385 .. 0.88

  Alignments for each domain:
  == domain 1  score: 130.2 bits;  conditional E-value: 2.7e-41
  tRNA-synt_1_2   1 rnWIGrseGleiefkveesee....klevfttrpdtlfGvtfvalapehplveklaekkkelaafieevkkksesereletkekeGv.ftglkaih 91 
                    +nWIG+s+G++i+f+v  +++    ++evfttr dt+fGv+++ala  hp+v++ a ++ +l++fi+  ++ s         +k G+   ++kai+
     KHJ31193.1 191 KNWIGKSSGAQIKFDVIADNSssyhSIEVFTTRLDTIFGVQYLALALTHPIVKQQAMTDLKLQDFIRAQSNFSLD-------SKFGYeLPKIKAIN 279
                    7**************98775334559****************************************876665544.......4789967899**** PP

  tRNA-synt_1_2  92 Pitgek.........ipiwvanyvlmeygtgavmavPahdqrDfeFakkyn..lpikqvikpedeekkleeseeayteegilvns.gefdglkske 175
                    P+ +ek         +pi+ a yvl + g gavm+vPahd rD++F+++      i+ v++++ +++ +e +   +t++g l+n  g f++++s +
     KHJ31193.1 280 PLAHEKitsekvkapLPIFAAPYVLGDVGNGAVMGVPAHDIRDHAFWEQNRpgNSIHCVVTSNPNQQLTEPTVIPFTNHGYLTNEcGPFSNMTSLK 375
                    **999999999*************************************997668999999988877666668899*******99626********* PP

  tRNA-synt_1_2 176 akekiak 182
                    a+++i +
     KHJ31193.1 376 ANKEILN 382
                    **99976 PP

>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.0   0.0   3.5e-23   7.9e-20       6     136 ..       6     138 ..       1     141 [. 0.94
   2 !    5.7   0.0    0.0023       5.1     172     219 ..     146     195 ..     139     202 .. 0.83
   3 ?    2.2   0.0     0.028        62     221     238 ..     397     414 ..     376     422 .. 0.87
   4 ?   -1.8   0.0      0.45     1e+03     134     150 ..     457     473 ..     445     479 .. 0.75
   5 !    8.7   0.0   0.00028      0.64     323     367 ..     598     642 ..     585     649 .. 0.86

  Alignments for each domain:
  == domain 1  score: 71.0 bits;  conditional E-value: 3.5e-23
                   --B--SS---HHHHHHHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHTT---S..EEEETTSHHHHHHH CS
  tRNA-synt_1g   6 alpYangklHlGhllevisaDifaRykrlrgeevlfvcgtDehGtpielkAekegvtpeelvekvheeikelfkklnisfd..kygrttseehkelv 100
                    +pY++g+lHlGhl+ + ++D+++R+ r++g++v++  g D++G p e +A ++g++p+  +e++ e++k++++++n  +d     +t + + ++ +
    KHJ31193.1   6 MFPYPSGDLHLGHLRVYTISDVLSRFYRMCGYNVIHPIGWDAFGLPAENAAIERGIDPKSWTEQNIEKMKNQLEDMNGYWDweREFKTCDPTFYKHT 102
                   68***************************************************************************98873334579999****** PP

                   HHHHHHHHHTT-EEEEEEEEEEETTTTEEE-GGG-E CS
  tRNA-synt_1g 101 qeifkklkekgliyekeieqlycpkderflpdryve 136
                   q++f+ l++kgl y++++ + ++p d++ l++++v+
    KHJ31193.1 103 QRLFTLLYKKGLAYQSKSYVNFDPIDQTVLANEQVD 138
                   ********************************9986 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0023
                   .....EEE.EEEEEE-GGGGHHHHHH..HH.HH-TTSHHHHHHHH.HHHH CS
  tRNA-synt_1g 172 sgskpevketehlffklskfekklke..wieeeekeleenvkkivkewlk 219
                   sg+k e ++ ++++f++sk++++l +   +  ++k ++e+v ++ k+w+ 
    KHJ31193.1 146 SGAKVEKRSLKQWYFRISKYRQELLDglLLLGKDKAWPERVLSMQKNWIG 195
                   7888899999************99874334466667************96 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.028
                   ----EE-ESS-SSS-EET CS
  tRNA-synt_1g 221 gLkdlaisrdldwGipvP 238
                    L+d+ +sr+  wG p+P
    KHJ31193.1 397 KLRDWLVSRQRYWGTPIP 414
                   599**************9 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 0.45
                   G-EE........-TTS- CS
  tRNA-synt_1g 134 yvegtCPkckseeargd 150
                    ++  CP c+s+ +r++
    KHJ31193.1 457 WINTICPSCGSKAKRDT 473
                   38999*****8877654 PP

  == domain 5  score: 8.7 bits;  conditional E-value: 0.00028
                   E--------------HHHHHHHH-HHHHHHHHHHHS-TTS-EEE- CS
  tRNA-synt_1g 323 vegkKlSkSrgvvvkakealerldadllRYylaaeapekkDldfs 367
                   v+ +K+SkS+ ++v ++ + e++ ad++R  ++ +ap ++ l++ 
    KHJ31193.1 598 VSFEKMSKSKYNGVNPTICREKYGADAMRAHILFQAPITEVLEWD 642
                   6669**************************999999988766655 PP

>> Anticodon_1  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   0.2   2.8e-16   6.3e-13       4     114 ..     721     841 ..     719     907 .. 0.80

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 2.8e-16
  Anticodon_1   4 ilselnklvkevteayee.yrfnkaasalyeffwndlcdwylelvkprlysesaedk.ra.aqevllevletllrllaPfmPfitEelwqr....... 91 
                  +++ +++++k+vt++y    ++n+++s+l+++      ++++e+  ++ + + +++k +   q  l++ +++l++++aP++P ++Ee+w+        
   KHJ31193.1 721 LWRSVQETIKKVTNSYSItRSLNTVISDLMTL-----TNTIIESPCNEKAVKISTPKnNIiNQIFLYWSVQQLIKMMAPITPAFAEECWEIledniyi 813
                  68889************76************5.....6888****99999999999965566799************************445555666 PP

  Anticodon_1  92 ......eeeelgkk....esimlaewpe.kaeel 114
                                     si+++++p+ ++++ 
   KHJ31193.1 814 ksenlpP------TtelqGSIFNESFPKfDDTYD 841
                  5444331......134448888888887665444 PP

>> tRNA-synt_1d  tRNA synthetases class I (R)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0     7e-07    0.0016      34     117 ..      13      94 ..       8     117 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 7e-07
                   --BHHHHHHHHHHHHHHHHHHHCT-EEEEEE--B-SSTCHHHHH..HHHHHHTTTTTTS-----SCCCHHHHHHHHCCCSHCCCHH CS
  tRNA-synt_1d  34 emhvGhLrstiiGdavsrlleflGydvirlnhvGDWGtqfGlLi..aylekkqdekllqeqelqdLeafykeakkdydeeeifaer 117
                   ++h GhLr   i d++sr + + Gy+vi    +G W   fGl +  a +e+  d k  +eq+++++++  ++++  +d e +f+  
    KHJ31193.1  13 DLHLGHLRVYTISDVLSRFYRMCGYNVIHP--IG-WD-AFGLPAenAAIERGIDPKSWTEQNIEKMKNQLEDMNGYWDWEREFKTC 94 
                   79*************************953..44.74.699876447899999999999999999999999999999999888765 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   2.3e-05     0.051      22     139 ..      13     140 ..       8     163 .. 0.73
   2 ?   -3.7   0.0       2.6   5.7e+03     185     198 ..     326     339 ..     320     343 .. 0.81
   3 ?    2.0   0.0     0.048   1.1e+02     248     296 ..     597     646 ..     582     650 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.3e-05
                   --BHHHHHHHHHHHHHHHHHHHTT-EEEEEEEBB--SHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHTT----.SB--BGGG..GHHHHHHHHHHH CS
  tRNA-synt_1e  22 ashlGhaRslvafDilrrilqalgYdvqfvqnvtDidDkiikrareeeksvkelaekfieefkkdleaLnvlkp.tleprvse..kvdeiielvekl 115
                   + hlGh R + + D+l r+ ++ gY+v +            + a e++   k+++e+ ie++k++le++n     + e +  +    ++  +l   l
    KHJ31193.1  13 DLHLGHLRVYTISDVLSRFYRMCGYNVIHPIGWDAFGLPAENAAIERGIDPKSWTEQNIEKMKNQLEDMNGYWDwEREFKTCDptFYKHTQRLFTLL 109
                   68*************************9988877777778888888999999999999999999999888654212233333211445556666667 PP

                   HHTTSEEE-TT.......S-EEE-GGG-TTT CS
  tRNA-synt_1e 116 iekgyaYavsd.......gdvyfdvskkeeY 139
                    +kg aY++++       +++++  ++ ++Y
    KHJ31193.1 110 YKKGLAYQSKSyvnfdpiDQTVLANEQVDSY 140
                   7889999888555555555555555555555 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.6
                   TSSEEE-SSHHHHH CS
  tRNA-synt_1e 185 wgkGRPGWhieCsv 198
                   w + RPG  i C v
    KHJ31193.1 326 WEQNRPGNSIHCVV 339
                   89999999999977 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.048
                   EETTBE--TTTT---BHHHHHTTS-HHHHHHH.HHSS-TTS-EEE-HHHH CS
  tRNA-synt_1e 248 kiegekmsksLknfitikdvlkkfdprqlRll.llsahyrsqldfkeell 296
                   ++  ekmsks  n +      +k+ + ++R   l +a   + l+++e+++
    KHJ31193.1 597 NVSFEKMSKSKYNGVNPTICREKYGADAMRAHiLFQAPITEVLEWDEDKI 646
                   57789***********99999*********76156777889999999887 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1     0.028        63       3      11 ..     416     424 ..     415     431 .. 0.62
   2 ?    7.8   0.3     0.001       2.3       4      11 ..     461     468 ..     459     473 .. 0.61

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.028
  zf-ribbon_3   3 vrCPnCGap 11 
                  v+C +CG +
   KHJ31193.1 416 VHCDHCGPV 424
                  567777765 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.001
  zf-ribbon_3   4 rCPnCGap 11 
                   CP+CG++
   KHJ31193.1 461 ICPSCGSK 468
                  57777776 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.2       1.1   2.6e+03      28      33 ..     417     422 ..     412     426 .. 0.65
   2 ?    8.7   0.0   0.00083       1.9      26      38 ..     459     471 ..     447     473 .. 0.82
   3 ?   -3.3   0.0       4.5     1e+04      15      29 ..     600     616 ..     598     618 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.1
  Zn-ribbon_8  28 aCPeCg 33 
                  +C +Cg
   KHJ31193.1 417 HCDHCG 422
                  377776 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00083
  Zn-ribbon_8  26 ltaCPeCgsevrr 38 
                  +t CP+Cgs+++r
   KHJ31193.1 459 NTICPSCGSKAKR 471
                  566*******999 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 4.5
  Zn-ribbon_8  15 fevlqsis.daplta.C 29 
                  fe++ +++    +++ C
   KHJ31193.1 600 FEKMSKSKyNGVNPTiC 616
                  99999999888888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (937 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       682  (0.0380389); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.74u 0.27s 00:00:01.01 Elapsed: 00:00:00.47
# Mc/sec: 5942.22
//
Query:       KHJ31194.1  [L=372]
Description: putative duf6 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.4e-22   79.6  30.1    1.1e-13   51.5   9.0    2.2  2  EamA          EamA-like transporter family
  ------ inclusion threshold ------
       0.31   10.5   5.7          2    7.9   1.0    3.0  3  E1-E2_ATPase  E1-E2 ATPase


Domain annotation for each model (and alignments):
>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.5   9.0   1.3e-17   1.1e-13       2     135 ..      29     165 ..      28     166 .. 0.82
   2 !   34.1  13.0     3e-12   2.7e-08       3     134 ..     208     339 ..     206     342 .. 0.86

  Alignments for each domain:
  == domain 1  score: 51.5 bits;  conditional E-value: 1.3e-17
        EamA   2 lgillallaalfwaiyfvlskil...lrkvspltltfvrfliagillliiallkegkl...aklslkdwllllllgllgtvlafllffyalkktsasna 94 
                 +g++l+l+a  f +++  ++++l    + ++++++ f r+   +i+ +i++++k+ ++   +++s+    ll+l + l ++++ ++++y++++++ ++a
  KHJ31194.1  29 RGAFLILIAEAFASAMDAIARYLqqgEHGMHTFQIIFARMSGTFIISFIYLWWKRLPNfplSNPSV--RPLLILRS-LFGFCGVFCIYYSVHYLPLAEA 124
                 699*************99999996667788**********87777777777777777753333333..33444555.55556667999*********** PP

        EamA  95 slitslePvftlilsvlllgekltlkqllgivlillGvlli 135
                 +++ +l+P++t++  ++ll++++t k+l+  +l+l+G+++i
  KHJ31194.1 125 TIFRFLVPLLTAFTCSILLHQPFTRKDLMLSILALVGIVII 165
                 **************************************998 PP

  == domain 2  score: 34.1 bits;  conditional E-value: 3e-12
        EamA   3 gillallaalfwaiyfvlskillrkvspltltfvrfliagill.liiallkegklaklslkdwllllllgllgtvlafllffyalkktsasnaslitsl 100
                 ++++a ++++  a ++++++ + ++ + l+l  + ++++++   ++++++ ++++ k+   dw  llllgllg+++ ++l++++l+   + +a+ +++ 
  KHJ31194.1 208 AVVMATIGVIGGAGSYTTIRFIGERAHALHLMIYYSFLCTFCSaFFLLVVPGISFVKPQGLDWVMLLLLGLLGFAV-QFLLTKGLQLDHSNKATSMLYS 305
                 6778889999999****************998877777777662445566666668899999********887766.5799****************** PP

        EamA 101 ePvftlilsvlllgekltlkqllgivlillGvll 134
                 ++++++++ +++++  + ++  +g ++++ ++l 
  KHJ31194.1 306 QVIYAILFDWVIWRVLPDKWGCIGGAIVIGSTLW 339
                 ****************************998875 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0     0.055   4.9e+02      86     128 ..      36      78 ..      28     108 .. 0.83
   2 ?    7.9   1.0   0.00022         2     118     163 ..     126     171 ..     123     177 .. 0.93
   3 ?    2.3   0.4     0.012   1.1e+02      95     168 ..     187     258 ..     183     264 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.055
                   EE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHH CS
  E1-E2_ATPase  86 tatgedtelgkiarlveeakskktplqkkldklgkvlvpvvll 128
                   +a +  + ++ iar +++ ++    +q +  ++++++++  + 
    KHJ31194.1  36 IAEAFASAMDAIARYLQQGEHGMHTFQIIFARMSGTFIISFIY 78 
                   5667778899999999999999999999999999988776554 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00022
                   HHHHHHHHHHHHHHHHHHS-STTTSSTTHHHHHHHHHHHHHS-TTH CS
  E1-E2_ATPase 118 lgkvlvpvvlliallvflialllgkslaeallralallvaaiPcaL 163
                   ++++lvp+ +++++ ++l++++++k+l  ++l  ++++++a P  +
    KHJ31194.1 126 IFRFLVPLLTAFTCSILLHQPFTRKDLMLSILALVGIVIIAHPASI 171
                   7899**************************************9765 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.012
                   TTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTTHHHHHHHHHHHHHS-TTHHHHHH CS
  E1-E2_ATPase  95 gkiarlveeakskktplqkkldklgkvlvpvvlliallvflialllgkslaeallralallvaaiPcaLplavp 168
                   +k+++   + + ++tp+q+ +  +++++ +++ + + +++ +   + +     l+   ++l  ++   + l+vp
    KHJ31194.1 187 SKVVSIYLSHADATTPIQRVIAVVMATIGVIGGAGSYTTIRFIGERAHA--LHLMIYYSFLCTFCSAFFLLVVP 258
                   566666667778999******9999999999999999888776555554..46666667777777666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       760  (0.0423894); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.46
# Mc/sec: 2450.88
//
Query:       KHJ31195.1  [L=603]
Description: putative asc-type amino acid transporter 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-59  201.4  45.2      3e-59  201.0  45.2    1.1  1  AA_permease_2  Amino acid permease
    2.1e-23   82.7  30.7    2.1e-23   82.7  30.7    2.4  3  AA_permease    Amino acid permease


Domain annotation for each model (and alignments):
>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  201.0  45.2   3.3e-63     3e-59       1     407 [.     115     560 ..     115     578 .. 0.85

  Alignments for each domain:
  == domain 1  score: 201.0 bits;  conditional E-value: 3.3e-63
  AA_permease_2   1 lsllsafalvigsvigsgifvkn.....laasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkvaflsawfnwfayvpv 91 
                    +++l  + l+igsvigsgif ++     +++s+g++li+w++ ++l++  +++  yaEl++a+p +gG+  y++++fg++++fl++w++ +   p+
     KHJ31195.1 115 ITFLNGLSLIIGSVIGSGIFSSPsqvniNTGSAGASLIVWIVAGILAW--TGASSYAELGGAIPLNGGAQIYLAKIFGELFGFLFTWCAIIVLKPG 208
                    67889999******************8888889998888777777775..8********888*******************************998 PP

  AA_permease_2  92 lasilsv.aasyllna.lgpdlqg.ntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl..stetdt. 181
                     a+i+s+ +++yl+ a +gpd +  + w+ + ia + l+lv+++n++++k + k+    + +k++  li + i+g+i++  g + s     ++++ 
     KHJ31195.1 209 SAAIVSIvMGEYLVRAvIGPDAESvSVWINKTIALLGLLLVTFLNCVSTKLGTKMSDLFMFMKFF-ALIGITITGVIVAATGLSYSGmaNEDWKNi 303
                    88886554999999983467544336999***********************************6.8888999******99888766665555556 PP

  AA_permease_2 182 .ffpngwpgv...llgllivlwsfdGfesaanvseevkk..kdvpkaifigllivlvlyllvniaflgvvpddeianlsnlgsvaalffeavggkv 271
                     +f ++++ v   +++l+  lw+fdG+++ + v+ e ++  +d+pk+i  ++ +v+++y+l ni++++v+p+d ++++++   va +f   v+g+v
     KHJ31195.1 304 rWFEGTSTNVglwAVALYSGLWAFDGWDNTNFVVGEFRNptRDLPKVIHTAMPLVILCYVLANISYFFVLPIDILNSTDT---VAVAFGSSVFGPV 396
                    69999888544558899*******************555549**********************************9987...6999********* PP

  AA_permease_2 272 vaiivvilialsllgaintavigssrvlealardgvlPrffakv...........nkfgs........................piraiiltaivs 332
                    ++ ++++++  s++ga+n+ +++s r+ + ++++g++P  f  +               +                        p++++il+a+++
     KHJ31195.1 397 GSLVLALVVSASCFGALNASTFTSGRLTYVAGKEGYIPVIFGEIgirnknaenmqT---TqrknwfikyierivgdedtglfftPVYSMILNATLT 489
                    *******************************************9665555555550...0555555555555555555555555***********9 PP

  AA_permease_2 333 lillllfllassaaynfllsvsslgliisyllliigalilrkkrphlkrpgk..ilvaiigalfllfllvalffppk 407
                     ++++l+  +    +++l++ + ++ +i+y+l+++g++ilr+k+p+l+rp+k  i++ ii+++++lfl+  ++f   
     KHJ31195.1 490 -AVYILL--G---ELSTLVTFYGVAGYIFYFLTVLGLIILRVKEPNLERPYKtwITTPIIFCCVSLFLVSRAIFAEP 560
                    .666544..3...69**********************************8887558999999999999965555443 PP

>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.7  30.7   2.4e-27   2.1e-23       5     332 ..     123     441 ..     120     447 .. 0.88
   2 ?   -3.8   8.2      0.39   3.5e+03     337     417 ..     478     553 ..     476     576 .. 0.76
   3 ?   -2.0   0.4      0.11     1e+03     143     169 ..     559     586 ..     538     595 .. 0.72

  Alignments for each domain:
  == domain 1  score: 82.7 bits;  conditional E-value: 2.4e-27
  AA_permease   5 ialggviGtglfvglgvvlsqaGplga.llayllagvviflvmlslgeiatngpksggfytyasrflgpelGfviGln..ylfswitvlaleltaasi 99 
                    +g+viG g+f + + v  + G +ga l+++++ag+  +  + s +e+  ++p +gg++ y ++  g+ +Gf   +    ++    ++++ ++  ++
   KHJ31195.1 123 LIIGSVIGSGIFSSPSQVNINTGSAGAsLIVWIVAGILAWTGASSYAELGGAIPLNGGAQIYLAKIFGELFGFLFTWCaiIVLKPGSAAIVSIVMGEY 220
                  579***********99999999998888*************************************************953334444444455555555 PP

  AA_permease 100 liqfwelvtdlpkawvt.....gavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkgagfrflgdngsifknnlppgfak 192
                  l+  +   +d+ +  v+     +++ l++++++n v+ k+  +++ +++++k+ a+i+  i g+i+ a g    g ++   ++n      ++ +    
   KHJ31195.1 221 LVRAV-IGPDAESVSVWinktiALLGLLLVTFLNCVSTKLGTKMSDLFMFMKFFALIGITITGVIVAATGLSYSG-MANEDWKNIR----WFEGT--- 309
                  55555.66777777777****999999************************************999999998999.6667777777....44444... PP

  AA_permease 193 eeegafknfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaaspfvifikesgvsvlap 290
                    + ++  +++++   + af+G  ++  + gE ++P +++Pk+i  ++ ++++ Yvl+ +++ +++p + l+++  +a      v f+++   +v + 
   KHJ31195.1 310 --STNVGLWAVALYSGLWAFDGWDNTNFVVGEFRNPTRDLPKVIHTAMPLVILCYVLANISYFFVLPIDILNSTDTVA------VAFGSSVFGPVGSL 399
                  ..667799**************************************************************99999555......56999999****** PP

  AA_permease 291 linaviltaalssansslysasRvlyslakdglaPkvlkkvs 332
                  ++++v+ +++++++n+s++++ R+ y   k+g++P +++ ++
   KHJ31195.1 400 VLALVVSASCFGALNASTFTSGRLTYVAGKEGYIPVIFGEIG 441
                  ***********************************8887765 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 0.39
  AA_permease 337 PlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsylrfRkalkyqgrsieelgfkaallplgvil 417
                  P+ +++l + + ++ +ll +l++    v+ + +a + +++l v++liil       + + ++ +i   +++ ++++l++++
   KHJ31195.1 478 PVYSMILNATLTAVYILLGELSTL---VTFYGVAGYIFYFLTVLGLIILRVKEPNLE-RPYKTWI-TTPIIFCCVSLFLVS 553
                  999*********************...888888999999999999998876544444.3355555.566666666666655 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.11
  AA_permease 143 alikiiaiiafiivg.iillaggkpnkg 169
                   ++k ++++afi+ g +i+++  + ++g
   KHJ31195.1 559 EPLKTVIVLAFILAGiPIYHFRFRSKNG 586
                  4678888888888888888888887777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (603 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       849  (0.0473534); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 4081.46
//
Query:       KHJ31196.1  [L=109]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       253  (0.0141112); expected 358.6 (0.02)
Passed bias filter:                      245  (0.013665); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 811.84
//
Query:       KHJ31197.1  [L=228]
Description: putative ppe family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      260  (0.0145016); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1641.99
//
Query:       KHJ31198.1  [L=173]
Description: putative capsid protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1283.49
//
Query:       KHJ31199.1  [L=492]
Description: putative acyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-35  120.9  38.6    7.6e-35  120.6  38.6    1.1  1  Acyl_transf_3  Acyltransferase family
  ------ inclusion threshold ------
       0.13   12.3   0.1       0.74    9.9   0.1    2.2  1  DUF772         Transposase domain (DUF772)


Domain annotation for each model (and alignments):
>> Acyl_transf_3  Acyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.6  38.6   8.5e-39   7.6e-35       2     331 ..      66     440 ..      65     470 .. 0.86

  Alignments for each domain:
  == domain 1  score: 120.6 bits;  conditional E-value: 8.5e-39
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............xxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxx RF
  Acyl_transf_3   2 aylDllRgiAillVvflHaliayspdagrgspiqasqssqi.............aflggfgvplFFllSGffla..........amlyrrrglskl 74 
                    aylD+lRg+A+l+V ++H         g g+  ++s+                 +  g+ +v++FF++SG++l+           +l+ + +  ++
     KHJ31199.1  66 AYLDGLRGFAALIVYCGHHQLWARDVIGAGAILENSWGYENrwyfaclpgirlfFSGGHLAVTIFFVISGYVLSakplsyiqsaEYLKLQDNIGSA 161
                    79**************776666666666676666666555588999*******9999*************************************** PP

                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Acyl_transf_3  75 ikrRilrlliplliwllliillialvaghiqanasanvtlfdet...........kglmfllfefpatghlWfLwalfvlylllplllrllrkvrk 159
                    ++rR+lrl+ip+++++++++++++l+  ++ +    +      +            +      + +++ h W+++++f ++++++  l+++ +   
     KHJ31199.1 162 LFRRWLRLYIPVICTTFIYMTSWHLFGIWTASPEHKKTYAEELWnyyiefknfsfVFRGSGNDWLTYNFHVWSIPVEFRGSIIIYTVLAAFSRCTV 257
                    *************************99999997777777776669*********99999999********************************** PP

                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxx. RF
  Acyl_transf_3 160 shlllllilllllslvfirhelfgpatsvgllplpsvlallfflfGalladaddrdrnlsr........glkislllsllllalillalfgqtdg. 246
                    s +l++ ++l++++ ++   ++                 +++fl G++l d+d    + ++                    ++++ l++ g + g 
     KHJ31199.1 258 SARLWCTVGLIFYFMYITDGAH-----------------YAMFLTGMILCDLDLLSLKGNLpnffhifsP--------HKKVICYTLFIIGIYLGg 328
                    **********************.................**********************555555552........444444444444444444 PP

                    ...................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx... RF
  Acyl_transf_3 247 ...................gglvasvliqsaslllvslgimllllllfalpsrsafk...llrylgkiSygiYliHlpllmllqkllrdwgln... 317
                                       ++ +++++ +++ ++++ ++ ++ + +  +   +++f+    ++ylgkiS+++Yl+H+p+l++l++ l+  + +   
     KHJ31199.1 329 vpsfkqeyeilqespgwrwLSVFKPQAVFDYKWFYLYWASLFMVFTIPRISTLKRFFewrFCQYLGKISFAFYLVHGPVLWILGDRLYVAAGWsre 424
                    444455578*********************************************999999****************************99777777 PP

                    ..xxxxxxxxxxxxxx RF
  Acyl_transf_3 318 ..lgevlllvlllvvs 331
                       g ++ ++ l+++s
     KHJ31199.1 425 vhGGALPGWINLFPLS 440
                    8855566665555554 PP

>> DUF772  Transposase domain (DUF772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   8.3e-05      0.74      18      57 ..     325     363 ..     317     398 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 8.3e-05
      DUF772  18 ylygl.Sdreleealrenlsfrwflgldleedpvpdhstls 57 
                 yl g+ S  + +e l+e++ +rw+  +++  ++v+d++ ++
  KHJ31199.1 325 YLGGVpSFKQEYEILQESPGWRWLSVFKP--QAVFDYKWFY 363
                 66789999999***************998..6799988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (492 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      237  (0.0132188); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3659.16
//
Query:       KHJ31200.1  [L=588]
Description: putative transcription-silencing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.6e-25   88.6   0.4      8e-25   87.5   0.4    1.6  1  Clr2_transil  Transcription-silencing protein, cryptic loci r
    8.9e-10   39.5   0.3    9.6e-08   32.9   0.1    3.0  2  Clr2          Transcription-silencing protein Clr2


Domain annotation for each model (and alignments):
>> Clr2_transil  Transcription-silencing protein, cryptic loci regulator Clr2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.5   0.4   8.9e-29     8e-25       1      68 []      66     151 ..      66     151 .. 0.99

  Alignments for each domain:
  == domain 1  score: 87.5 bits;  conditional E-value: 8.9e-29
                   -EESS--TT-EEEEE--------................---EEEEE--TTS..--B-SHHHHHHHHHHHHH-TT--GGG--SHHH CS
  Clr2_transil   1 yvLkelPagYalyehqkgkeekn................erkdtyLyGhpsg..krfrSpaeflpHllwLltdkekdvknCsCklC 68 
                   y+L+elP+gY l+eh k++++k                 +r+d+yLyGhp+g  kr+rSpa+f+pHllwL tdke+d++nCsCk+C
    KHJ31200.1  66 YILTELPDGYVLWEHIKYNKNKGldvkkkekgkhaagmyDRQDAYLYGHPQGrkKRYRSPADFFPHLLWLGTDKEGDSANCSCKIC 151
                   9********************98****************************999******************************** PP

>> Clr2  Transcription-silencing protein Clr2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.14   1.2e+03      41     115 ..     160     229 ..     149     263 .. 0.56
   2 !   32.9   0.1   1.1e-11   9.6e-08       2     146 .]     367     482 ..     367     482 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.14
        Clr2  41 ndkadvlvideIqvllktadeedleeketi..rlaGkvytlvrkraykppssnaappakpkpleavvieelpkgfka 115
                  d  + l+ +eIq +    +++ l++++ti  r++ + ++ v+++  ++++ +a  +  pk+    + ee  + ++ 
  KHJ31200.1 160 VDESITLRAEEIQTK---KEPKLLPSSSTItpRFIVSTTQSVSNQISSASPTKATIHLPPKK----MSEEQKADYQP 229
                 555555666666633...23333444444311566666666666665543333333222222....33444555544 PP

  == domain 2  score: 32.9 bits;  conditional E-value: 1.1e-11
        Clr2   2 yqGvylGaEriwvgDtVRlkpsesdnnlasklelssdasndkadvlvideIqvllktadeedleeketirlaGkvytlvrkraykppssnaappakpkp 100
                 y+G++lGaE+iw g++VRl    sd                   +l id           e++ ++  + ++G+ y+lv+ ++++    ++  p+ +  
  KHJ31200.1 367 YNGMFLGAEKIWAGEPVRLSGYGSD-----------------IVILIIDRMI--------ERTGNPPNVLFTGDEYKLVEMPSHS---RTSDWPKYSHN 437
                 99***********************.................9999999986........3567899**************9974...44444566888 PP

        Clr2 101 leavvieelpkgfkavelrkygewyrvh.sgkevelsendvaGRfYe 146
                 l +++i + ++ ++ v +r  g wy    ++   + +++dv+GR+Ye
  KHJ31200.1 438 LPPRMITD-IAFRNEVAAR-KGIWYEWRlTATPATKTLKDVKGRWYE 482
                 99999999.9999999986.6777766656777777788*******7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       381  (0.0212505); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:01.39
# Mc/sec: 1281.96
//
Query:       KHJ31201.1  [L=314]
Description: putative thiamine pyrophosphokinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-30  104.5   0.0      7e-30  103.5   0.0    1.5  1  TPK_catalytic   Thiamin pyrophosphokinase, catalytic domain
    1.7e-17   62.9   0.7    3.3e-17   62.0   0.7    1.5  1  TPK_B1_binding  Thiamin pyrophosphokinase, vitamin B1 binding


Domain annotation for each model (and alignments):
>> TPK_catalytic  Thiamin pyrophosphokinase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.5   0.0   7.8e-34     7e-30       2     113 ..      45     175 ..      44     180 .. 0.82

  Alignments for each domain:
  == domain 1  score: 103.5 bits;  conditional E-value: 7.8e-34
  TPK_catalytic   2 kqlwknaslrvcaDgGanrly..........eeekerlellpdvivGDlDSirpevkefyeskgteivkkpdqdstDlekai.........alvle 78 
                    ++lw+na ++v+aDgGanrly          +++++   l  + ivGDlDS+rp+ + ++ +++++i+++p+qdstD+ ka+         +    
     KHJ31201.1  45 SRLWANAVYKVAADGGANRLYdlnkntcnniSDNASPPFLHLNCIVGDLDSLRPDSRAYWVQQKVPIIHYPEQDSTDFAKAVyhirnhfigQ---- 136
                    689******************999987665544444456666999*************************************6666533332.... PP

  TPK_catalytic  79 kekedk.........nksivvlgalggRfDhtlaninvllklkk 113
                         +         + +ivvlg l+gR+Dh+++ ++ l++l++
     KHJ31201.1 137 -----HenkeeenqkSIDIVVLGDLSGRIDHAMSILHNLYTLQE 175
                    .....233444666699***********************9854 PP

>> TPK_B1_binding  Thiamin pyrophosphokinase, vitamin B1 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.0   0.7   3.6e-21   3.3e-17      12      70 .]     240     295 ..     223     295 .. 0.88

  Alignments for each domain:
  == domain 1  score: 62.0 bits;  conditional E-value: 3.6e-21
                     B.-EEEEEESSSSEEEEEEESBSS-EEEEEESTTCETEEEEEBS.SSEEEEEEESBSEE CS
  TPK_B1_binding  12 egkyvgliPlggevtglttkGlkwnledwelefggllstSNeveeeeeavtietdsgvl 70 
                      +k+vg+iPl +e++ ++t Gl+w++ +we++fgg++stSN ++  +++v+i+t++++l
      KHJ31201.1 240 INKHVGIIPL-KESSIISTLGLQWDVANWETQFGGQISTSNYII--NNVVSIQTSKDIL 295
                     679*******.8*******************************9..3579******997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       793  (0.04423); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.45
# Mc/sec: 2101.72
//
Query:       KHJ31202.1  [L=788]
Description: putative cap binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-87  291.2   0.0      6e-87  290.3   0.0    1.4  1  MIF4G_like    MIF4G like
    3.4e-71  239.9   0.0    6.8e-71  238.9   0.0    1.5  2  MIF4G_like_2  MIF4G like
    1.8e-05   24.5   0.2    8.7e-05   22.3   0.1    2.2  3  MIF4G         MIF4G domain


Domain annotation for each model (and alignments):
>> MIF4G_like  MIF4G like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  290.3   0.0     1e-90     6e-87       1     190 [.     328     517 ..     328     518 .. 1.00

  Alignments for each domain:
  == domain 1  score: 290.3 bits;  conditional E-value: 1e-90
  MIF4G_like   1 Pdasslaavllrdilvdvinllevnrkeaakllldldlyltkktfalratsvdklkdldppestwkledvvveavlsellqlptpekklvyyhslltei 99 
                 P+++++a+ llrd++vd+in+l+ nr+++a++l+ +d+y++++tf++rat++d+l+d++ ++ twk+edvvv+av+s+l+qlp pe+klvyyhs+lte+
  KHJ31202.1 328 PPTTDIASCLLRDAIVDTINILDYNRNATAQFLIGIDCYFSPSTFVKRATPFDRLRDIEGGKLTWKPEDVVVDAVFSQLFQLPFPEHKLVYYHSVLTEA 426
                 8999*********************************************************************************************** PP

  MIF4G_like 100 cklaPkavaPslGrairllyaalssldvelierfldWfshhlsnfgftWkWkeWvedvelpalhPrkvfikrviekeirlsyadriketlP 190
                 ck+aP+a+aPslGrair+ly++++ +d+el  rf+dWf+hhlsnfgftWkW+eW++dvel  l+P+k+fi+++++keirls+a+rik tlP
  KHJ31202.1 427 CKIAPAAIAPSLGRAIRFLYRSVDCIDLELSYRFMDWFAHHLSNFGFTWKWTEWIDDVELSGLDPKKAFIEGTLDKEIRLSFAQRIKGTLP 517
                 ******************************************************************************************9 PP

>> MIF4G_like_2  MIF4G like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   0.0       1.6   9.8e+03     209     230 ..     115     136 ..     112     140 .. 0.72
   2 !  238.9   0.0   1.1e-74   6.8e-71       1     265 [.     535     778 ..     535     780 .. 0.92

  Alignments for each domain:
  == domain 1  score: -4.3 bits;  conditional E-value: 1.6
  MIF4G_like_2 209 qkelflivferlveilseslee 230
                   q+el+  v+++ v+ l++s+++
    KHJ31202.1 115 QRELVTEVLDKSVTKLNDSIQK 136
                   6777777888888888877665 PP

  == domain 2  score: 238.9 bits;  conditional E-value: 1.1e-74
  MIF4G_like_2   1 fkyedeslPfaaeaqelldlirkkapaeevlelldeikesaeeegsieadpdslsidvfvqtllhvGskSlSHvlsaierykevLkel.aeseeara 96 
                   fky++e++Pfaae++e+l+l+rkk +++ +++++d+i++ a e +  ++dp+++s+d+++++++++GskSlSHvls+ier+k +L +l   s++ar 
    KHJ31202.1 535 FKYSQEDTPFAAEGREILSLLRKKSTEDAIQPVIDRIHARAIEMN--IPDPLVVSTDAYMTAICYIGSKSLSHVLSCIERCKGRLMALgPVSPAARK 629
                   9****************************************8874..8****************************************999****** PP

  MIF4G_like_2  97 qileavmrfWknnpqmaiiivdkLlnyqivepasVvewifskeknegltrayvwEllkrtlskvnkrvkkvrqeleelkkkeeeekakeeedkeeee 193
                   qi+e+vm++Wk++p++++++vdkLlny+i++p+sVvew++    +  l++ay++E++++t+skv++r   vrq  +++             ++ + e
    KHJ31202.1 630 QIIESVMEYWKDQPGIGVNLVDKLLNYTILSPESVVEWALAR-DGTRLAKAYIFEMVSSTISKVTGR---VRQVYRAKS-----------VSGLSPE 711
                   *****************************************6.99**********************...777772222...........3388999 PP

  MIF4G_like_2 194 eleraeekleaaqkeqkelflivferlveilsesleeletsgseentevieewkkwwikrllkvflrkyave 265
                   + + + +++e++++++k+lf+++++ l  +++     + ++g++   +v +  + +w+ r+l+vf rk ave
    KHJ31202.1 712 QTKILINTVESERASMKNLFQLLEKYLLGWINLYN--GAQNGTK---NVEDVLTNEWANRWLRVFKRKLAVE 778
                   **********************************3..3333333...334589***************9987 PP

>> MIF4G  MIF4G domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.1   1.5e-08   8.7e-05      16     114 ..      62     152 ..      46     196 .. 0.86
   2 ?   -2.5   0.0      0.54   3.2e+03      32      50 ..     625     643 ..     610     657 .. 0.80
   3 ?   -3.6   0.0       1.1   6.9e+03     169     187 ..     721     739 ..     715     741 .. 0.82

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 1.5e-08
                 HHHHHHHHHHHHHCS..CHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC-S-HHHHHHHHHHHHHHHHHHHHHH CS
       MIF4G  16 fevlikqllklamdd..dknelkevielifekaveepsfsplyarlcgklnsrfqqnFrikllnklqeefekryeleneleenedgnrrrrlglvrflg 112
                 +e+ i ++ k++ d+  d++ +  +iel+++ ++e+p ++p +a ++++  ++++ + ++ +l+k +  +++         + ++g++r+++ l++flg
  KHJ31202.1  62 VEDEIISIAKTICDNveDGELKAGFIELVIQLVIEQPFKIPFIAAVIMYADTIQR-ELVTEVLDKSVTKLND---------SIQKGDWREVKLLMKFLG 150
                 4555566666666668999************************************.****************.........9999*************9 PP

                 HH CS
       MIF4G 113 el 114
                  l
  KHJ31202.1 151 SL 152
                 87 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.54
                 HHHHHHHHHHHHHHHHHCG CS
       MIF4G  32 knelkevielifekaveep 50 
                 ++++k++ie+++e + ++p
  KHJ31202.1 625 PAARKQIIESVMEYWKDQP 643
                 6789999999999999998 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHHHHHH CS
       MIF4G 169 ekakkeldqffkriqkile 187
                 e+ ++ ++++f+ ++k+l+
  KHJ31202.1 721 ESERASMKNLFQLLEKYLL 739
                 5678899999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (788 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       595  (0.0331865); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 5337.05
//
Query:       KHJ31203.1  [L=357]
Description: putative mitochondrial import receptor subunit tom40 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-86  290.6   0.5    1.4e-86  290.3   0.5    1.0  1  Porin_3   Eukaryotic porin


Domain annotation for each model (and alignments):
>> Porin_3  Eukaryotic porin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  290.3   0.5   7.7e-91   1.4e-86       1     270 []      42     328 ..      42     328 .. 0.98

  Alignments for each domain:
  == domain 1  score: 290.3 bits;  conditional E-value: 7.7e-91
                 S---CCCCCHHH.HHHHHCCHTTTECEEEEEEEECCECCEEEEEEEETTTS.-ECEEEEEEEEETCCCEEEEEECCCSCCEEEEEECCSSTTCEEEEEE CS
     Porin_3   1 nPgtyedlgkea.kdllpkdYhfeglkldvtkktslgvaFqvshsfslgsg.kvsysfeakykdkgltltlkgntdndlsltarvneqlaeglklklsa 97 
                 nPg+ +++ +e+ +d+l+ +Y+f+gl++d+tk++s+++ Fqvshsf +gs+ +++y+++a++    ++++++gn+dnd++l+ r+n++l ++l +k ++
  KHJ31203.1  42 NPGSADNIAREVqRDVLLSNYTFSGLRADLTKAFSMSPLFQVSHSFAMGSQsLPPYTLAALFG--TNKIFMQGNVDNDGNLSTRFNYRLMQSLISKTQV 138
                 8**************************************************************..********************************** PP

                 EE-TTT--EEEEEEEEEEETTEEEEEEEEC.TC.....EEEEEEEEEEECTSTEEEEEEEEEECTTTCCEEEEEEEEEEEC....SEEEEEEEEETTTE CS
     Porin_3  98 qltpekgkksakleldykgddftaslklgn.sk.....tpvvvasllqsvtpglalGaeavydtasgkltkyaaalsyaar....dwiaslqllnngga 186
                 q++p+++ ++a+++ +y+g+dftaslk+ n s      t+++ +s+lq++tp+lalG+ea++++a+ + +++aa +sy+ar    dw +s+ql  +gga
  KHJ31203.1 139 QISPGNQ-SMAQFDNEYTGRDFTASLKSLNpSYidgglTGIFIGSYLQAITPNLALGLEAMWQRAALNQGPDAA-VSYCARykgsDWALSAQL-AAGGA 234
                 *****86.**********************888***********************************998877.*****************9.68*** PP

                 EEEEEEEECCTTEEEEEEEEEETTEE...........EEEEEEEEEEEECTCEEEEEEEECTTEEEEEEEEEECTTEEEEEEEEEECCCTEEEEE CS
     Porin_3 187 ltasyyqkvsekvevgaeltlnassq...........estttlGakydldksttvkakidsngkvgllleqkLrpgvtltlsaelDhkknahkfG 270
                 ++as+++k+sekve+g++++ ++ s            e++tt+Gakyd+++s t++a++ds+gk+++lle+++  +v lt++a +Dh k+++k+G
  KHJ31203.1 235 FNASFWRKLSEKVEAGVDCNIQLASApvdsmmgnlrkEGKTTVGAKYDFRMS-TFRAQVDSTGKLSCLLEKRVAQPVMLTFAADMDHSKQQAKIG 328
                 ****************************************************.*****************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2736.42
//
Query:       KHJ31204.1  [L=400]
Description: putative protein kinase gsk3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-64  218.5   0.0    1.2e-64  218.2   0.0    1.1  1  Pkinase         Protein kinase domain
    2.2e-24   86.2   0.0    2.8e-24   85.8   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    7.3e-06   25.5   0.0    5.2e-05   22.7   0.0    1.9  2  Kinase-like     Kinase-like
     0.0037   17.2   0.0      0.009   16.0   0.0    1.6  1  APH             Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.088   12.1   0.0       0.15   11.4   0.0    1.3  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
      0.099   12.2   0.0       0.15   11.6   0.0    1.3  1  Choline_kinase  Choline/ethanolamine kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.2   0.0   4.1e-68   1.2e-64       1     264 []      40     324 ..      40     324 .. 0.89

  Alignments for each domain:
  == domain 1  score: 218.2 bits;  conditional E-value: 4.1e-68
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE.....SSEEE..EEEE--TTEB..HHHHHH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee.....kdely..lvleyvegge..ladlle 90 
                 y++ + +G+GsfG+V++ + + +g+  A+K++ ++k+ k+      rE++i++ ++hpn+v+l+ +f++     kde+y  lv+e+v+++        +
  KHJ31204.1  40 YTQCKIVGNGSFGVVFQTKLSPSGEDAAIKRVLQDKRFKN------RELQIMRIVRHPNVVKLKAFFYSsngerKDEVYlnLVQEFVPETVyrA---SK 129
                 678899****************************999883......69********************99***955555459******875332...33 PP

                 ....HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH.TTSCBSHHHHHHHH CS
     Pkinase  91 ....rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLid.ekgelKitDFGlakelessskltsfvgtseYlAPEvl.keneyskkvDvWsl 183
                      k++++  e+k +++q++++l+y+Hs+gi+HrD+Kp+N+L+d ++g lK++DFG ak l ++++  s++++++Y+APE++ ++++y++k+D+Ws 
  KHJ31204.1 130 yfskMKTTMPTLEIKLYIYQLFRALAYIHSQGICHRDIKPQNLLLDpTTGILKLCDFGSAKILIENEPNVSYICSRYYRAPELIfGATNYTTKIDIWST 228
                 343456679999**********************************99999************************************************ PP

                 HHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT...SHH...HHHTTS.....................-HHHHHHHHHHT-SSGCCSTTHHHH CS
     Pkinase 184 Gvilyelltgkppfsgekgkekvekeldqlekilkilg...etkeklpeasei.....................seeakdllkkllkkdpkkRltaeel 258
                 G++++el+ g+p+f+   g++     +dql++i+k+lg    ++  + ++                        ++ a++l++ ll+++p++Rl+a ++
  KHJ31204.1 229 GCVMAELMLGQPLFP---GES----GIDQLVEIIKVLGtpsREQIRTMNP--NymehkfpqikphpfnkvfrraDSGAIELISCLLEYTPTERLSAINA 318
                 ***************...544....899*********9754222333333..2458899999************************************* PP

                 HTSGGG CS
     Pkinase 259 lqhpyl 264
                 + hp++
  KHJ31204.1 319 MVHPFF 324
                 ****98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.8   0.0   9.3e-28   2.8e-24       4     207 ..      43     243 ..      40     278 .. 0.83

  Alignments for each domain:
  == domain 1  score: 85.8 bits;  conditional E-value: 9.3e-28
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE....SSSS.....EEEEEE--TTE..BHHH CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvct....keep.....llivteyvkgG..dLlk 90 
                   k +G+G+fG V++ +l+     + ++ a+K + ++++ +      +e++im+ ++hpn+vkl ++ +    +  +     l +v e+v++     +k
   KHJ31204.1  43 CKIVGNGSFGVVFQTKLS----PSGEDAAIKRVLQDKRFK-----NRELQIMRIVRHPNVVKLKAFFYssngE--RkdevyLNLVQEFVPETvyRASK 129
                  5789**************....778899****96666655.....57******************99976541..145666889******99556789 PP

                  HHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHH CS
  Pkinase_Tyr  91 fLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsks 186
                  +  k  k+++ + ++  +++q+ ++++y++s+ + Hrd+  +N Ll+  + + k++DfG a+ + ++   + + +  ++  + apE ++  + +t+k 
   KHJ31204.1 130 YFSKM-KTTMPTLEIKLYIYQLFRALAYIHSQGICHRDIKPQNLLLDPtTGILKLCDFGSAKILIEN---EPNVSYICSRYYRAPELIFGATnYTTKI 223
                  **999.9999999999******************************9725699********999333...3445566777788*****98766***** PP

                  HHHHHHHHHHHHHTTSSGTTT CS
  Pkinase_Tyr 187 DvWsfGvllwEiftlgespyp 207
                  D+Ws G ++ E++  g+  +p
   KHJ31204.1 224 DIWSTGCVMAELML-GQPLFP 243
                  ************97.666555 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.15   4.4e+02      13      58 ..      39      84 ..      30     123 .. 0.79
   2 !   22.7   0.0   1.7e-08   5.2e-05     146     239 ..     144     231 ..     129     236 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.15
  Kinase-like 13 tlvrgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdler 58
                  + + +++++g ++vvf+ k    ge+ a+k  l  ++  +++l+ 
   KHJ31204.1 39 RYTQCKIVGNGSFGVVFQTKLSPSGEDAAIKRVLQDKRFKNRELQI 84
                 56677899999**********999***9999988877655555554 PP

  == domain 2  score: 22.7 bits;  conditional E-value: 1.7e-08
  Kinase-like 146 rlllTlqlirlaanLqakglvhgkftvdnllldekgg.lmlggftaLvragtkvvl.seve.kgfaPpEllgsrggytrknktkmthkldaWqlGlv 239
                  +l++  ql r  a+++++g+ h +++++nllld+  g l+l +f++     ++ +  s ++ + +  pEl+           t++t k+d W  G v
   KHJ31204.1 144 KLYI-YQLFRALAYIHSQGICHRDIKPQNLLLDPTTGiLKLCDFGSAKILIENEPNvSYICsRYYRAPELIFG--------ATNYTTKIDIWSTGCV 231
                  4566.799*************************9755379****87554443333227887788999999866........4789999999999987 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0     3e-06     0.009     164     193 ..     158     186 ..     107     191 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 3e-06
                 S-EEEE-SS-SGGGEEEC..TTEEEEE--- CS
         APH 164 lptvllHgDlhpgNllvdpddgrvtGviDf 193
                  +++++H+D++p+Nll+dp+ g +  + Df
  KHJ31204.1 158 HSQGICHRDIKPQNLLLDPTTGIL-KLCDF 186
                 4789**************886554.45555 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.9e-05      0.15     127     155 ..     150     178 ..     122     193 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.9e-05
         Kdo 127 vgrliaklhragvnHadlyaknillqqee 155
                 + r+ a +h+ g++H+d+ ++n+ll+ + 
  KHJ31204.1 150 LFRALAYIHSQGICHRDIKPQNLLLDPTT 178
                 55778899*****************9986 PP

>> Choline_kinase  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0     5e-05      0.15     137     171 ..     153     186 ..      79     191 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 5e-05
                     HHHCHGG-EEEE-S--SGGGEEE.-CTTEEEE--G CS
  Choline_kinase 137 lleelespvvfcHnDlqegNillnkeekklvlIDF 171
                      l +++s    cH D+ ++N+ll+ +++ l l DF
      KHJ31204.1 153 ALAYIHS-QGICHRDIKPQNLLLDPTTGILKLCDF 186
                     3333333.468***********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2829.73
//
Query:       KHJ31205.1  [L=112]
Description: hypothetical protein EV44_g3909 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0055   16.2   0.0     0.0061   16.1   0.0    1.2  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   3.4e-07    0.0061     162     210 ..      21      80 ..       7     105 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 3.4e-07
                 TEEECTTEEEEEESSHHH......HHHHHHHHHHHHHHTT--BEGGG-EEE......... CS
       RVT_1 162 tllrYaDDililskskee......lqelleaveewlkesglkinpeKtklvlft.....v 210
                 +   YaDD+ il +s++       +   ++ + +w    g+ + p+K++l++f      +
  KHJ31205.1  21 NAFGYADDFAILETSRSLeenaskFRDSINLILSWGDTEGVALDPKKSELLHFSrkhrgK 80 
                 4678*******9888766679999***************************998544440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       264  (0.0147247); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 887.71
//
Query:       KHJ31206.1  [L=125]
Description: putative 60s ribosomal protein l31 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-39  134.1   0.2      2e-39  133.7   0.2    1.1  1  Ribosomal_L31e  Ribosomal protein L31e


Domain annotation for each model (and alignments):
>> Ribosomal_L31e  Ribosomal protein L31e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.7   0.2   1.1e-43     2e-39       1      81 [.      20     100 ..      20     101 .. 0.98

  Alignments for each domain:
  == domain 1  score: 133.7 bits;  conditional E-value: 1.1e-43
  Ribosomal_L31e   1 evvtreytInihkrihgvgfkkraprAlkeikkfamkemgtpdvridtrLnkavwakgirnvpyrirvrlsrkrnedEdsk 81 
                     +vv+reytIn+h+r+hgv+fkkraprA+keik+fa+k mgt dvr+d++Lnk vw+ gi+ vp r+rvr+srkrn++E +k
      KHJ31206.1  20 DVVSREYTINLHRRLHGVTFKKRAPRAIKEIKAFATKSMGTLDVRLDPQLNKKVWEAGIKGVPFRLRVRISRKRNDEEGAK 100
                     69****************************************************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       499  (0.027832); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1008.46
//
Query:       KHJ31207.1  [L=1172]
Description: putative heavy metal translocating p-type atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-50  171.7   0.3    1.1e-50  171.7   0.3    2.1  3  E1-E2_ATPase  E1-E2 ATPase
    1.9e-42  145.9   0.2    4.1e-42  144.8   0.2    1.6  1  Hydrolase     haloacid dehalogenase-like hydrolase
    6.3e-41  138.6   2.0    7.3e-10   39.1   0.0    4.9  4  HMA           Heavy-metal-associated domain
    4.2e-07   30.0   7.6    1.7e-05   24.7   0.3    3.4  3  Hydrolase_3   haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.065   13.3   0.4       0.23   11.5   0.0    2.1  2  HAD_2         Haloacid dehalogenase-like hydrolase
       0.12   12.4   2.5       0.59   10.2   0.3    2.8  2  DUF1656       Protein of unknown function (DUF1656)
       0.82    9.8   6.6         17    5.7   0.1    3.6  3  DUF678        Protein of unknown function (DUF678)
       0.86    9.3   4.4        3.6    7.2   0.0    3.1  3  Orai-1        Mediator of CRAC channel activity


Domain annotation for each model (and alignments):
>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.1       4.1   9.2e+03     120     138 ..     380     398 ..     361     409 .. 0.54
   2 ?   -3.6   0.3         3   6.8e+03     123     149 ..     459     486 ..     445     498 .. 0.48
   3 !  171.7   0.3   4.8e-54   1.1e-50      15     180 ..     563     744 ..     542     745 .. 0.93

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 4.1
                   HHHHHHHHHHHHHHHHS-S CS
  E1-E2_ATPase 120 kvlvpvvlliallvflial 138
                   k   ++++ ++l+ ++i +
    KHJ31207.1 380 KLSLTFAIPVFLISMIIPM 398
                   3333333344444443333 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 3
                   HHHHHHHHHHHHHS-STTTSSTT.HHHH CS
  E1-E2_ATPase 123 vpvvlliallvflialllgksla.eall 149
                   + ++++++++++++ ++    ++ ++++
    KHJ31207.1 459 TSAAFFFSIAAMIVSVIAPPHTRpNTIF 486
                   4444455555555544444443333333 PP

  == domain 3  score: 171.7 bits;  conditional E-value: 4.8e-54
                   -EEEEGGG--TTSEEEEETT-B--SEEEEEEE-SEEE-TTTS---S-EE-G-TTEE-TT-EEEE-EEEEEEEE-TTTSTTTTTSTTS--------HH CS
  E1-E2_ATPase  15 eeeidakelvpGDivllkagdrvpaDgrivegsaevdesaLTGEslpvekekgdmvfsGtvvvsgeakavVtatgedtelgkiarlveeakskktpl 111
                   e++i+++ +++GDiv+l++gd++paDg ++ g++ vdes++TGE +p +k kg+++++Gtv+ +g++ ++V++ g+dt+l++i++lv+ea+ +++p+
    KHJ31207.1 563 EKTIPTELIEVGDIVILRPGDKIPADGYVIRGETHVDESMITGEPMPLQKRKGSSLIAGTVNGAGRVDFRVIRAGKDTQLNQIVKLVQEAQTARAPI 659
                   567********************************************************************************************** PP

                   HHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTT...............HHHHH.HHHHHHHHS-TTHHHHHHHHHHHHHHHHHH CS
  E1-E2_ATPase 112 qkkldklgkvlvpvvlliallvflialllgksla...............eallr.alallvaaiPcaLplavplalalgarrlak 180
                   q+  dk+++++vp++l+++ll+f ++++l + l+                  ++  ++++v a+PcaL+la+p+a+++g++  a+
    KHJ31207.1 660 QRLTDKIAGYFVPTILFLGLLTFSTWMILSHVLNnppgifmqensggkiMVCVKlCISVIVFACPCALGLATPTAVMVGTGVGAE 744
                   ****************************9999999999********9984445559***********************998776 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.8   0.2   1.8e-45   4.1e-42       4     209 ..     764    1009 ..     761    1010 .. 0.91

  Alignments for each domain:
  == domain 1  score: 144.8 bits;  conditional E-value: 1.8e-45
                  EEEESBTTTBCHHHHHHH.......HHHHH.......CHHHHHHHHHHHHCHHHHHHHHHHHHH.........HHHHHHHHHETTTE.......... CS
                  xxxxxxxxxxxxxxxxxx.......xxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxx.......... RF
   Hydrolase    4 vvfDkdGTLttgepsved.......vivsa.......alalaaaletgsehpigkalvaaakar.........sgaltgfatfigrg.......... 67  
                  vvfDk+GTLt g++sv             +        + + a  e+gsehpigka+ aaak+          +g +++f+++ g+g          
  KHJ31207.1  764 VVFDKTGTLTFGKMSVDNtkltpqwQ---IdsrrknlWWNIVALAEMGSEHPIGKAILAAAKKQiglsnnsvvEGTIDEFEAILGNGvnalvkpsls 857 
                  9***************9966666552...0444555555556777888*********77777777*****9999999******************** PP

                  ......HHHHTHHHHHHHH..HCHHHHHHHHHHHHHHCHHHHHH............TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSE CS
                  ......xxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase   68 ......ayaigkpewltal..dippdlgaaigsaqsqgrtvall............qaralavftiadplkvkpeaaeavasLkaagievvlltgdn 144 
                        +++ig++e+l+a+  +ip+d  +a ++ +s++ ++  l            ++ + +++ ++d+  vk+ a+  + +L+++gi+++++tgd+
  KHJ31207.1  858 fekdqyRILIGNVEFLEANniTIPKDIIKASEKVNSKALISNKLtsagitniyvaiDGIYSGIICLSDT--VKDSAVASIIALHRMGIKTAIVTGDQ 952 
                  ******************************************99*************************..************************** PP

                  HHHHHHHHHHTTGGGESEEEEHHCES...STTTSHHHHHHHHHHHTSTGGGEEEEESSHHHHHHHHHT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  145 petaeraanqlGddyfdaviasdiet...vakpspegkvaaireLqgkpeevamVGDgvnDaaalaaA 209 
                  ++ta ++a+++G           i+     a+  p+ k+++i+ Lq ++e vamVGDg+nD++ala A
  KHJ31207.1  953 RSTALAVARRVG-----------ISSrnvYAGMTPDKKQEIIKNLQSEGECVAMVGDGINDSPALATA 1009
                  ************...........4444569***********************************987 PP

>> HMA  Heavy-metal-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.4   2.7e-12   6.1e-09       1      60 [.      30      89 ..      30      91 .. 0.90
   2 !   39.1   0.0   3.3e-13   7.3e-10       1      61 [.     123     183 ..     123     184 .. 0.91
   3 !   37.9   0.0   7.8e-13   1.8e-09       1      61 [.     207     267 ..     207     268 .. 0.95
   4 !   21.0   0.0   1.5e-07   0.00034       2      61 ..     290     349 ..     289     350 .. 0.95

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 2.7e-12
         HMA  1 tvrvsgmhCagCaakvekvLselpgVesvkvdlatktvtVegdaestklrkiieaiekag 60
                t+r+ gm+C +C ++ve  L + +gVesv+v+l+  +++V++d ++++ ++i + i + g
  KHJ31207.1 30 TLRIGGMTCSSCTSAVEGGLVGQNGVESVSVSLVMERAVVVHDNSKITSEEITKIINDRG 89
                789***************************************999966688888776655 PP

  == domain 2  score: 39.1 bits;  conditional E-value: 3.3e-13
         HMA   1 tvrvsgmhCagCaakvekvLselpgVesvkvdlatktvtVegdaestklrkiieaiekagy 61 
                 t++++gm+C +C +++e  ++  pgV+s++++l + +++Ve+d +s++  ++   ie+ g+
  KHJ31207.1 123 TFAIKGMTCSACTSAIEAGVKDKPGVYSINISLLSERAVVEHDSSSLSSDQLAHIIEDRGF 183
                 799*****************************************99776778877777666 PP

  == domain 3  score: 37.9 bits;  conditional E-value: 7.8e-13
         HMA   1 tvrvsgmhCagCaakvekvLselpgVesvkvdlatktvtVegdaestklrkiieaiekagy 61 
                 t++++gm+C++C +++e  ++ + g+ + +++l + +++V +d+++++ +kiie ie+ g+
  KHJ31207.1 207 TIAIKGMTCGACTSAIETGFKDIGGIIQFNISLLAERAVVLHDPSKLTSEKIIEIIEARGF 267
                 6899******************************************888********9887 PP

  == domain 4  score: 21.0 bits;  conditional E-value: 1.5e-07
         HMA   2 vrvsgmhCagCaakvekvLselpgVesvkvdlatktvtVegdaestklrkiieaiekagy 61 
                 ++v+g+ + ++a + e  L +l+gV+s+k++lat ++++++++  + lr++++ iek +y
  KHJ31207.1 290 LKVFGIKDPASATSLENMLISLNGVNSAKINLATTRLEISHVPNLIGLRALVNFIEKQNY 349
                 6799*************************************************9999777 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.5      0.01        23      81     202 ..     252     373 ..     227     376 .. 0.65
   2 ?    2.9   0.0     0.035        77      15      55 ..     926     966 ..     923     974 .. 0.88
   3 !   24.7   0.3   7.5e-09   1.7e-05     193     244 ..     980    1031 ..     978    1039 .. 0.93

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.01
                  HHHHHHHHHHHHHTTCEEEEEESSEEEESTT.THHHHHHHHHCHCTCEEEESHHHHHCHCSESEEE.EES-HHHHHHHHHHHHHHCTTTE.....EEE CS
  Hydrolase_3  81 kedvkeiikllkennveillytedkvyvlnkeksekkkkeeektkkkkeeidseeeledeeiakil.ilkdkekldelekelksklnkll.....tit 172
                  k + ++ii++++ ++ e+++ +++ +y +n+  + +k +  + +  k++ + ++ e+    ++ +  +   k +l  ++ e+++  n l+      ++
   KHJ31207.1 252 KLTSEKIIEIIEARGFEAQIISTELAYLNNN--NSSKRSLLKVFGIKDPASATSLEN---MLISLNgVNSAKINLATTRLEISHVPN-LIglralVNF 343
                  556789*************************..222222222233333333333333...333333344444444444333333322.2234446778 PP

                  EESTTEEEEEETT-SHHHHHHHHHHHCT-- CS
  Hydrolase_3 173 ssskgyleimpkgvsKgtalkklakelnis 202
                    +++y  +++++ +K   l+ lak+  is
   KHJ31207.1 344 IEKQNYSALVSENDDKNAQLESLAKTKEIS 373
                  888899999999***********9999887 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.035
                  ---HHHHHHHHHHHHTTSEEEEE-SS-HHHHHHHHHHCCCC CS
  Hydrolase_3  15 kisektkeaikklkekgikvviATGRslravlpvleelgld 55 
                  ++++++++ i  l+  gik +i TG + +++l v++ +g++
   KHJ31207.1 926 TVKDSAVASIIALHRMGIKTAIVTGDQRSTALAVARRVGIS 966
                  678999999***********************999999987 PP

  == domain 3  score: 24.7 bits;  conditional E-value: 7.5e-09
                   HHHHHHCT--GGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEE- CS
  Hydrolase_3  193 kklakelnisleeviafGDgeNDieMLeaaglgvAmgnaseevkkaAdyvtk 244 
                   ++++k+l+ + e v+ +GDg ND + L  a lg+Am ++++ + +aAd v  
   KHJ31207.1  980 QEIIKNLQSEGECVAMVGDGINDSPALATASLGIAMSSGTDVAMEAADVVLM 1031
                   67999*******************************************9975 PP

>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       3.1   6.9e+03      76     109 ..     329     361 ..     269     370 .. 0.56
   2 ?   11.5   0.0    0.0001      0.23      85     167 ..     932    1005 ..     924    1015 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.1
       HAD_2  76 kevkpydgvkelLeeLkeagyklgivTsksreav 109
                  +v  + g++ l++ +++++y+ ++v+ ++++++
  KHJ31207.1 329 SHVPNLIGLRALVNFIEKQNYS-ALVSENDDKNA 361
                 4566666777777777777776.55555544443 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.0001
       HAD_2   85 kelLeeLkeagyklgivTsksreaveekleqlgiesyFdvivtsedvekkKPdpeviekaleklklkkeeviyvGDsptDiea 167 
                     +  L+++g+k +ivT  +r+++    +++gi s    ++ + +   kK      ++++++l+ + e v +vGD ++D  a
  KHJ31207.1  932 VASIIALHRMGIKTAIVTGDQRSTALAVARRVGISSR--NVYAGMT-PDKK------QEIIKNLQSEGECVAMVGDGINDSPA 1005
                  5567789**************************9663..4444433.3443......7999*****************99755 PP

>> DUF1656  Protein of unknown function (DUF1656)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.22     5e+02       7      28 ..     409     430 ..     403     437 .. 0.87
   2 ?   10.2   0.3   0.00026      0.59       4      31 ..     666     693 ..     665     694 .. 0.94

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.22
     DUF1656   7 vyvPpllvlallAllltlllrr 28 
                 ++vP+l +  ++++++t+++  
  KHJ31207.1 409 LLVPGLYLGDVICFFITIPVQF 430
                 589***************9975 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00026
     DUF1656   4 lgGvyvPpllvlallAllltlllrrlla 31 
                 ++G +vP++l+l ll + ++++l ++l+
  KHJ31207.1 666 IAGYFVPTILFLGLLTFSTWMILSHVLN 693
                 7899**********************97 PP

>> DUF678  Protein of unknown function (DUF678)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.2     0.031        69      26      34 ..      36      44 ..      17      78 .. 0.75
   2 ?    5.7   0.1    0.0074        17      47      68 ..     117     138 ..     109     140 .. 0.74
   3 ?    1.7   0.1      0.13   2.8e+02      55      68 ..     209     222 ..     191     230 .. 0.68

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.031
      DUF678 26 tTCSlCqSk 34
                +TCS+C S 
  KHJ31207.1 36 MTCSSCTSA 44
                89****995 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0074
      DUF678  47 sklkvavgkgntlrCaACgSsL 68 
                 +++ +++++ + ++C+AC S++
  KHJ31207.1 117 NNYTTTTFAIKGMTCSACTSAI 138
                 5677777888888888888875 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.13
      DUF678  55 kgntlrCaACgSsL 68 
                 + + ++C AC S++
  KHJ31207.1 209 AIKGMTCGACTSAI 222
                 44556777777776 PP

>> Orai-1  Mediator of CRAC channel activity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.055   1.2e+02     110     140 ..     373     407 ..     317     448 .. 0.71
   2 ?   -2.5   0.6       1.5   3.4e+03     110     157 ..    1057    1104 ..    1042    1110 .. 0.68
   3 ?    7.2   0.0    0.0016       3.6       7      34 ..    1120    1148 ..    1114    1161 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.055
      Orai-1 110 kaWlfatal....GillFLvevallswvkFlavss 140
                  +W+ a++l     i++FL+++++ +++  l++ s
  KHJ31207.1 373 SEWRRAFKLsltfAIPVFLISMIIPMFLPALDFGS 407
                 35777777665559*********999987776666 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.5
      Orai-1  110 kaWlfatal.GillFLvevallswvkFlavssaaalvvtailvpvlilf 157 
                   +W++ +++ G+++ +       w +++++ + aa++++ + v+v  l 
  KHJ31207.1 1057 LSWACGYNIiGLPFAMGIFLPFGW-HLHPMAAGAAMAASSVSVVVSSLL 1104
                  678887777777777776666777.566677777777777776665444 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0016
      Orai-1    7 rklel.srakLkassrtsALlsgFamvam 34  
                  ++l l ++++Lk +s+ sAL s F+ v  
  KHJ31207.1 1120 KDLLLgNEQQLKRVSKDSALSSVFSFVKN 1148
                  4444426789***************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1172 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       735  (0.040995); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.84u 0.23s 00:00:01.07 Elapsed: 00:00:00.43
# Mc/sec: 8204.89
//
Query:       KHJ31208.1  [L=530]
Description: putative serine threonine-protein kinase chk1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-59  201.4   0.0    2.1e-59  201.0   0.0    1.1  1  Pkinase      Protein kinase domain
    6.6e-28   97.7   0.0    9.5e-28   97.2   0.0    1.1  1  Pkinase_Tyr  Protein tyrosine kinase
    2.4e-10   40.2   0.0    3.5e-10   39.7   0.0    1.2  1  Kinase-like  Kinase-like
  ------ inclusion threshold ------
       0.14   11.5   0.0       0.25   10.7   0.0    1.3  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family
       0.15   12.0   0.0        3.4    7.5   0.0    2.2  2  APH          Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  201.0   0.0   5.9e-63   2.1e-59       4     263 ..      17     289 ..      14     290 .. 0.91

  Alignments for each domain:
  == domain 1  score: 201.0 bits;  conditional E-value: 5.9e-63
                 EEEEEEESSEEEEEEEET.TTTEEEEEEEEECHCHCHHHH...HHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--H CS
     Pkinase   4 leklGeGsfGkVykavek.etgkivAvKkikkekakkkke...kkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgslse 97 
                  +++G+G+++++ ka+   +t+  ++vK i k  a k  +   k++++E++++ ++  h+ni++ + + e++ + ++ +ey+egg+l+d +e+++ +se
  KHJ31208.1  17 SKTIGRGAYASIKKAIPInNTSPVFVVKFIHKAYAIKHGRlsaKQIAMEVSLHSHIGkHSNIIEWFATGEDSVWKWIAMEYAEGGDLFDKIEADVGVSE 115
                 689************9861567789********9999888899*************99***************************************** PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS...BCTTTSCGGGS-HHHH............TTSCB.SHHHHH CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk...ltsfvgtseYlAPEvl............keney.skkvDv 180
                 + a ++++q+++g++y+Hskg+ HrD+KpeNiL++ +g+lKi+DFGla+ +e + k    t+++g++ Y+APEv+            ++++y  + vD+
  KHJ31208.1 116 DIAHFYFTQLISGVNYMHSKGVGHRDIKPENILLSGSGNLKIADFGLATLFEYNGKtklSTTMCGSPPYIAPEVIscsrnsrsngssTTSGYmANLVDI 214
                 ***************************************************9998889999**************999988776654346776889*** PP

                 HHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGG CS
     Pkinase 181 WslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpy 263
                 Ws+Gv+l+ ll g++p+ + ++++    e+++      + ++ + + + ++++++++++ll+ ++++d +kR+t++ ++qhp+
  KHJ31208.1 215 WSCGVVLFVLLVGNTPWDEPTSNS---WEFQE-----YVGKKGRSSDDLWQKLPSSVLSLLRGMMNVDVTKRFTFNYIKQHPW 289
                 ******************555555...44444.....33357889999**********************************9 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.2   0.0   2.6e-31   9.5e-28       4     257 ..      17     286 ..      15     287 .. 0.86

  Alignments for each domain:
  == domain 1  score: 97.2 bits;  conditional E-value: 2.6e-31
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH....HHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee....keelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkke 96 
                  +k++G+Ga++++ ++      ++++   +vK +++ +  ++     +++  e+++ +++ kh ni++  +   ++   +i +ey++gGdL + ++++ 
   KHJ31208.1  17 SKTIGRGAYASIKKAIPI---NNTSPVFVVKFIHKAYAIKHgrlsAKQIAMEVSLHSHIgKHSNIIEWFATGEDSVWKWIAMEYAEGGDLFDKIEAD- 110
                  799*************99...555556678888665554443343899999**********************9999******************98. PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE............. CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk............. 181
                     ++ +    + +q+ +G++y++sk + Hrd+   N+Lls +   ki+DfGLa   e + +++ +++   +  ++apE+++ ++             
   KHJ31208.1 111 -VGVSEDIAHFYFTQLISGVNYMHSKGVGHRDIKPENILLSGSGNLKIADFGLATLFEYNGKTKLSTTMCGSPPYIAPEVISCSRnsrsngssttsgy 207
                  .6777777777889*******************************************88888888888889999*******988888999*9999998 PP

                  EEHHHHHHHHHHHHHHHHTTSSGTTTTS..HHHHHHHHHHTTEES-BB..TTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 182 ftsksDvWsfGvllwEiftlgespypgl..kneevleklkegkrlekp..ekcpeelyelmkkcweedpeeRptfselve 257
                  +    D+Ws Gv+l+ ++  g++p+ +   ++ e+ e++ ++ r +    +k p+++ +l++  ++ d ++R tf+ + +
   KHJ31208.1 208 MANLVDIWSCGVVLFVLLV-GNTPWDEPtsNSWEFQEYVGKKGRSSDDlwQKLPSSVLSLLRGMMNVDVTKRFTFNYIKQ 286
                  88889**********8887.****98874355679999966666554323899**********************99976 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7   0.0   9.7e-14   3.5e-10     142     288 .]     115     278 ..     101     278 .. 0.81

  Alignments for each domain:
  == domain 1  score: 39.7 bits;  conditional E-value: 9.7e-14
  Kinase-like 142 etiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggft..aLvragtkvvlsevekgfaP...pEllg.srgg...ytrknktkmthk 230
                  e+ia+ + T qli  + ++++kg+ h +++++n+ll   g l++ +f+   L+ +  k +ls++  g  P   pE+++ sr+            m+  
   KHJ31208.1 115 EDIAHFYFT-QLISGVNYMHSKGVGHRDIKPENILLSGSGNLKIADFGlaTLFEYNGKTKLSTTMCGSPPyiaPEVIScSRNSrsnGSSTTSGYMANL 211
                  788999996.7**********************************996448**********9998554444448986524444321222233346777 PP

  Kinase-like 231 ldaWqlGlviyriwclklPltlateeakeew..........kfklckkipekvkaLlkkfLqlsqedR 288
                  +d W  G+v + +   + P +++t++   e+          +  l +k p  v  Ll++++++++ +R
   KHJ31208.1 212 VDIWSCGVVLFVLLVGNTPWDEPTSNSW-EFqeyvgkkgrsSDDLWQKLPSSVLSLLRGMMNVDVTKR 278
                  9*********************998753.335669999998788899****************99988 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0     7e-05      0.25     130     155 ..     128     153 ..     101     163 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 7e-05
         Kdo 130 liaklhragvnHadlyaknillqqee 155
                  ++ +h+ gv H+d+ + nill   +
  KHJ31208.1 128 GVNYMHSKGVGHRDIKPENILLSGSG 153
                 5788******************8776 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.045   1.6e+02      12      84 ..      39     105 ..      30     121 .. 0.75
   2 ?    7.5   0.0   0.00094       3.4     166     198 ..     135     165 ..     130     166 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.045
                 EEEEEEETT--EEEEEE-TTS-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SS CS
         APH  12 rtylvttpagryvlrrnpparaaeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllr 84 
                 +++ v+  ++ y+ ++ + +  a +i+ ev l  ++ k+   + e +a    +e++ + + ++ey +g +l +
  KHJ31208.1  39 PVFVVKFIHKAYAIKHGRLS--AKQIAMEVSLHSHIGKHSN-IIEWFA---TGEDSVWKWIAMEYAEGGDLFD 105
                 55555555566777777777..99***************55.888888...7788888899****99999988 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.00094
                 EEEE-SS-SGGGEEEC..TTEEEEE---TT-EE CS
         APH 166 tvllHgDlhpgNllvdpddgrvtGviDfedagl 198
                 +++ H+D++p N+l+   ++    + Df++a+l
  KHJ31208.1 135 KGVGHRDIKPENILLSGSGNLK--IADFGLATL 165
                 5677************444444..999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3815.45
//
Query:       KHJ31209.1  [L=377]
Description: putative protein rax1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-13   49.1   0.1    1.8e-10   41.1   0.1    2.3  1  RGS       Regulator of G protein signaling domain


Domain annotation for each model (and alignments):
>> RGS  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.1     1e-14   1.8e-10      14     112 ..      38     255 ..      30     260 .. 0.90

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 1e-14
                 HHHHHHHHTTCT.HHHHHHHHHHHHHTS....................................................................... CS
         RGS  14 lFreFlesefse.enlsFwlaveefkka....................................................................... 40 
                 +F  ++++++++ ++l+Fwl+v +  +                                                                        
  KHJ31209.1  38 FFYVYMRDQQRSvDYLDFWLDVAQHMSLcrhyvrelrrsvligtpdvdkppsrqasqilenletrnldtegsstenydrnkddqtsaflrennvdkdrr 136
                 688899988888899999999998888888999999999999999999999999999999999999999999999999999999999999999999999 PP

                 ..............................................SHHHHHHHHHHHHHHHHTSTTSTTSSTS-HHHHHHHHHHHCSS.STTTTTTHH CS
         RGS  41 ..............................................keqeelkkkakeIyneylapsspkelnidkklreelekrleke.qpsrklfee 92 
                                                                ++ ++ + a++I+ ++l +++++e+++++++++e+++ +e+  + ++++f++
  KHJ31209.1 137 ldsqqssansqnniagqkssnqlsrnsfglsssqllktssgspehsISRADIRQSAEKILFTFLLRGAEREIFLPDAIVDEITHSIEERgRDDPEVFDA 235
                 9999999999999999999999999999999999999999999887788899999*********************************98999****** PP

                 HHHHHHHHHHHHHHHHHHTS CS
         RGS  93 aqeevfellekdsypkFlks 112
                 a+++vf+ +e+d+yp Fl+ 
  KHJ31209.1 236 AKDYVFQAMERDAYPGFLRA 255
                 *****************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       811  (0.045234); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.28s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2720.38
//
Query:       KHJ31210.1  [L=266]
Description: putative pci domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-05   24.0   0.2    0.00011   22.6   0.0    1.7  2  PCI       PCI domain


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   6.3e-09   0.00011      25     104 ..      70     154 ..      51     155 .. 0.85
   2 ?   -2.3   0.0      0.35   6.3e+03      18      41 ..     181     203 ..     177     228 .. 0.61

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 6.3e-09
                 H....HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSH.HHHHHHHHHHHHTTSSSEEEETTTTEEEEC CS
         PCI  25 l....eeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsv.devEkilvklIrdgeirakidqesgivvfk 104
                 +     +++++   l +l      k+r+ ++ +++    +++++ l ++l+l++  e+E++++++I+ g++++++d+ ++ v+++
  KHJ31210.1  70 FsygtYQTYCRTSSLPKLSIVQTIKLRQLSFLTLATNPANLTYDILLSALGLKTyRELENLVISAIYAGLVECTLDPYNKRVIVT 154
                 4555557788888888888899999*****************************************************9999986 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.35
                 HHHHHHHHHHHHHHHTTHHHHHHH CS
         PCI  18 fseelkdleeelladdglaqlles 41 
                 + ++l dl e+++ + +++ l  +
  KHJ31210.1 181 CTSTLTDL-ERYITKYKTEALKRQ 203
                 55566666.555555555554433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       701  (0.0390987); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 1993.63
//
Query:       KHJ31211.1  [L=1008]
Description: putative hydroxymethylglutaryl-coenzyme a reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.4e-140  468.5   3.1     2e-140  468.0   3.1    1.2  1  HMG-CoA_red     Hydroxymethylglutaryl-coenzyme A reductase
    9.1e-13   48.3   7.1    7.5e-09   35.6   1.0    2.6  2  Sterol-sensing  Sterol-sensing domain of SREBP cleavage-activ
    1.2e-07   30.3   6.2    2.6e-07   29.2   6.2    1.5  1  Patched         Patched family


Domain annotation for each model (and alignments):
>> HMG-CoA_red  Hydroxymethylglutaryl-coenzyme A reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  468.0   3.1  3.4e-144    2e-140       1     367 []     595     979 ..     595     979 .. 0.96

  Alignments for each domain:
  == domain 1  score: 468.0 bits;  conditional E-value: 3.4e-144
                  -HHHHHHHHHH.S-HHHHHH......HTT----.HHHHHHHSSS---------EEEEEEEETTEEEEEEE---STTHHHHHHHHHHHHHHTT-B.EEE CS
  HMG-CoA_red   1 aveeRrkllee.lteeelee......lkeesld.eevadkmiEnviGyvqlPlGvagpllingkeylvPmAteEgslvAsasrgakainesgGvkttv 90 
                  av++Rr+++++ lt++++        l+++++d ++v+++++EnviGy++lPlGvagp+ i+ ++y++PmAt+Eg lvAs+srgakain++gG+ t++
   KHJ31211.1 595 AVKIRRAVISRtLTTSQTTGlleyskLPYKNYDwDRVLGACCENVIGYMPLPLGVAGPIIIDSQSYFIPMATTEGVLVASTSRGAKAINAGGGAVTVI 692
                  58899999988644443333455555899********************************************************************* PP

                  E----EEEEEEEE.--S-HHHHHHHHHTHHHHHHHHHHCSHHCCT-EEEEEEEEE-SSEEEEEEEEE-TTC--HHHHHHHHHHHHHHHHHH..HTSEE CS
  HMG-CoA_red  91 lkdgmtraqvvllesvedaaelkkwiekkeeleelanaaestsrggglkdievvlagrlvvlrlkvdtgDAmGaNmvnkateaaaelieee..fgeee 186
                  + dgmtr+++v +e++e+a ++k w++++   + +++a++stsr+++l++i+++lag++++ r+k++tgDAmG+Nm++k++e+a++++ +e  f++++
   KHJ31211.1 693 TGDGMTRGPCVSFETLERAGAAKVWLDSEIGQKIITKAFNSTSRFARLQSIKTALAGTYLYPRFKTTTGDAMGMNMISKGVEHALNVMATEagFEDMQ 790
                  **************************99999*********************************************************98867889** PP

                  EEEEE-S--GGGEEEEEEEEEHHHH..-SSTTHHHHHHHHHHHHHHHHHH-HHHH....HHHHHHH........HHHHHHHHHHTT--HHHHHHHHHH CS
  HMG-CoA_red 187 llsilsNlctdkkasainaiegrgksvvaeatigeevvekilkasaealvdlnra.n.igtankGi.ggfnahaaNgiaAvflAtGqDlaaveessha 281
                  ++s+++N+ctdkk++ain+i+grgksvvaea+i++++v+++lk +++a+v+ln++ n +g+a++G+ ggfnahaaN+++A+flAtGqD+a+++ess++
   KHJ31211.1 791 IISVSGNFCTDKKPAAINWIDGRGKSVVAEAIIPKDIVKSVLKSTVDAMVELNISkNlVGSAMAGSiGGFNAHAANIVTAIFLATGQDPAQNVESSNC 888
                  ************************************************************************************************** PP

                  HTTSEEETTTEEEEEEEEE.----SBSHHHHH-HHHHHHHHTT---HH.........HHHHHHHHHHHHHHHHHHHHHT-----HHHHHHHH CS
  HMG-CoA_red 282 iaaleevedgdlygsvtlPsleVGtvGGgtklppqaellkllgvkgak......nakeLaeiiaavgLAqelsalrALaaeglqkgHmklhr 367
                  i+++ +  +g+l +sv++Ps+eVGt GGgt l+pq ++l++lgv+g++      na++La+iiaa +L++els+++ALaa++l+k+Hm+++r
   KHJ31211.1 889 ITLMRNL-GGNLQISVSMPSIEVGTLGGGTILEPQGAMLDMLGVRGSHpthpgeNARRLARIIAASVLSGELSLCSALAAGHLVKSHMAHNR 979
                  *******.778*******************************************************************************97 PP

>> Sterol-sensing  Sterol-sensing domain of SREBP cleavage-activation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.7     2e-06     0.012       4      64 ..      93     154 ..      90     162 .. 0.79
   2 !   35.6   1.0   1.3e-12   7.5e-09      67     144 ..     182     260 ..     174     267 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2e-06
                     HHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHH.HHHHHHHHHHHCHHCCHHCHHHHHHH CS
  Sterol-sensing   4 skfgLglagviivllsvasslgllaylgltltlii.levlPflvlavgvdnifvlvkavqrt 64 
                     s f+L  + ++  +++ +  l + + +g+ l +ii +e lPflv+ +g d + +l+kav + 
      KHJ31211.1  93 SNFWLFGMTLLSSTFAFLFGLIVTTKMGIALDMIIlSEGLPFLVVTIGFDKSIILTKAVLSA 154
                     566666666777777777777788888999988762689*******************9776 PP

  == domain 2  score: 35.6 bits;  conditional E-value: 1.3e-12
                     TTCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHCCHH.HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTX CS
  Sterol-sensing  67 sldeseriaealgevgpsilltsltellalllgaltdvp.avqeFclfaavavlvdFllqitfFvavLsldirreeser 144
                     s++ +  ++ a++e g+ i+  ++ e+++l++ga++ v+ ++q+Fc+ aa  +++d +l  tf++a+Ls++++ ++ +r
      KHJ31211.1 182 STTIPYAVQLAIEEKGYMIVRDYAIEICILIIGAISGVQgGLQQFCFLAAWILVFDCILLFTFYTAILSIKLEINRINR 260
                     455567788999************************99846*****************************998776665 PP

>> Patched  Patched family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   6.2   4.4e-11   2.6e-07     229     468 ..      71     332 ..      56     334 .. 0.84

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 4.4e-11
     Patched 229 LlvfsiivsvvlssdalkidwvrskpilailgvlspvlAivsslGlllwlGfrfnsivtv..tPFLvLaiGvDdmflmvaawkrteakls......... 316
                 Ll + ++    +s   ++   + s ++l  + +ls+  A + +l +   +G+    i +    PFLv+ iG D + ++ +a+     +++         
  KHJ31211.1  71 LLGYISMHLTFFSL-MVSMRKMGSNFWLFGMTLLSSTFAFLFGLIVTTKMGIALDMIILSegLPFLVVTIGFDKSIILTKAVLSAALRNRrpapgllgn 168
                 44443333333333.45566678999***************888888899*999998765337*****************998888777779******* PP

     Patched 317 ................vkkrigealseagvaitiTslTdvlsFgiGaittlp.aiqlFciytavailfdfiYqitffaavlaiaakaeaegrhslllii 398
                                 ++  ++ a++e g  i+     ++    iGai+ +  ++q Fc  +a  ++fd i  +tf++a+l+i  + ++ +rh+ l  +
  KHJ31211.1 169 nrqpafeskhvvssttIPYAVQLAIEEKGYMIVRDYAIEICILIIGAISGVQgGLQQFCFLAAWILVFDCILLFTFYTAILSIKLEINRINRHVALRQA 267
                 **************999999*****************************99736***************************************999997 PP

     Patched 399 ekeespsklqeiesessekdddkskeaee..lkskffreiyapfllnksvrlvvlllfvvylaiaiyGcvni 468
                  +++    +++i  e+++     s+e  +  l+ + + +i++  + n+sv  + +l+   +++i +  +++i
  KHJ31211.1 268 LEDD---GINKIVAENVAE----SEEWPKpsLVGNDMTNIFGRNINNNSVPTFKILMVSGFIVINVFNICTI 332
                 6444...567777777766....4443333477899**************9999999999999988877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1008 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.30s 00:00:01.05 Elapsed: 00:00:00.47
# Mc/sec: 6472.69
//
Query:       KHJ31212.1  [L=385]
Description: putative cytochrome P450 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-11   42.5   8.2    5.2e-08   32.1   0.8    3.0  2  p450      Cytochrome P450
  ------ inclusion threshold ------
       0.56    9.9   4.4        1.9    8.2   1.2    2.5  2  DUF2312   Uncharacterized protein conserved in bacteria (DUF2


Domain annotation for each model (and alignments):
>> p450  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   1.3   2.9e-05      0.26      96     229 ..      65     189 ..      32     193 .. 0.84
   2 !   32.1   0.8   5.8e-12   5.2e-08     324     430 ..     251     343 ..     250     346 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 2.9e-05
                 HHHHHHHHHHHTSHSTTTHHHHHHHHHHHHHHHHHCCCCHCS...EEETHHHHHHHHHHHHHHHHHSSHHHTTTSSHHHHHHHHHHHHHHHHHCHHHHC CS
        p450  96 kklRrfltptltsfgklsleelveeeaedlveklrkkagess...elditellskaaldvigsilFgarfdlledeklselvkaveelssllskssvql 191
                 + +Rrfl  t+ +      ++ +++ +e +++++++++  ++   +l+++ l+++ ++ +i++ +F++    ++ +++++++k++++++sl  ks    
  KHJ31212.1  65 HVHRRFLRSTIKKL-ESIAKSDWKKATEFVCQEVEERRYNAKvlgSLKLSSLVQCLTFRFIMYEFFSS----VQPPRDTTIEKLTKKINSLWIKSK--S 156
                 57899999999988.4467888999999999999999999999999*******************999....89999***********99776644..5 PP

                 CCCCHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        p450 192 lllfpllkylptkllrklkeavkklkdlldklieerre 229
                 + + +     ++ l+ + ke+ + l++++ +++ee ++
  KHJ31212.1 157 FEIEK-----LEVLETEKKEILQLLSETMSEKVEEGNK 189
                 55555.....5667777788888889999988888766 PP

  == domain 2  score: 32.1 bits;  conditional E-value: 5.8e-12
                 HHHHHHHHHHHSCSSTTEEEEESSSCEEETTEEE-TT-EEEEEHHHHHT-TTTS.SSTTS--GGGGB-TTSCTESSCTT--TTEEGGGS-TTH.HHHHH CS
        p450 324 ldavikEtLRlhpvvplllpRevtkdvvirgylipkGtevivnlyalhrdpevf.pnPeeFdpeRFldekgnskrksfaflPFGaGpRnCiGe.rlArm 420
                 +++++kEtLRl+p++  ++            y +  G +  v + +l+rd  +f pn+++F+p R+ + ++    k +++lPFG G+  C+ + ++A m
  KHJ31212.1 251 MNMIVKETLRLYPPTR-RI------------YRLFDGMKDCVDVESLQRDHVIFgPNANKFQPRRWKNIEQ---EKLEQYLPFGYGKFKCPARnNVASM 333
                 5899************.88............777788888999*************************987...789*************987358888 PP

                 HHHHHHHHHH CS
        p450 421 elklflatlL 430
                 ++ ++ +tl+
  KHJ31212.1 334 MIAILSSTLI 343
                 8887776665 PP

>> DUF2312  Uncharacterized protein conserved in bacteria (DUF2312)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1     0.024   2.2e+02       5      43 ..      71     107 ..      68     110 .. 0.85
   2 ?    8.2   1.2   0.00021       1.9       9      33 ..     159     183 ..     155     190 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.024
     DUF2312   5 LrqfieRiErleeEkkaiaedikdvyaeaKseGfdtkvl 43 
                 Lr++i ++E +   k++ ++    v +e+  + ++ kvl
  KHJ31212.1  71 LRSTIKKLESIA--KSDWKKATEFVCQEVEERRYNAKVL 107
                 899999999987..6888899999999999999999998 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00021
     DUF2312   9 ieRiErleeEkkaiaedikdvyaea 33 
                 ie++E le Ekk+i + + + ++e 
  KHJ31212.1 159 IEKLEVLETEKKEILQLLSETMSEK 183
                 9**************9999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       864  (0.0481901); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 2732.99
//
Query:       KHJ31213.1  [L=706]
Description: putative heterokaryon incompatibility protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-37  127.8   0.4    7.6e-37  126.9   0.4    1.5  1  HET       Heterokaryon incompatibility protein (HET)


Domain annotation for each model (and alignments):
>> HET  Heterokaryon incompatibility protein (HET)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.9   0.4   4.2e-41   7.6e-37       1     146 []      52     203 ..      52     203 .. 0.89

  Alignments for each domain:
  == domain 1  score: 126.9 bits;  conditional E-value: 4.2e-41
         HET   1 YeaLSYvWgdskekeeievngklleltenledalqvlrk.lgerylWiDaiCInQdddkekskqvqlmadIYsnAelvivalgsesedsgllalealra 98 
                 YeaLSYvWgds+++ +ie+ng +l++t++l+ al+++r  ++ r+lW+D +CInQdd +e++ q++lm++IY  A++v+v+lg++++++ + a++a+++
  KHJ31213.1  52 YEALSYVWGDSTRSVAIECNGAELKITKSLHLALRQIRYpDKSRLLWVDLVCINQDDLDEREDQIPLMKSIYPMASTVLVWLGEADDKT-ESAINAIEE 149
                 9*************************************99**********************************************776.999999988 PP

         HET  99 lkkekleekeielkksaek......kkellekeeraieellespwfkRvWvlQE 146
                  +  +   + ++  ++ +k       +  ++++ +a+ +l+++pwf+R W++QE
  KHJ31213.1 150 WATFNRHYRYDNCATQFSKfeeqfaFRPDYRDTLEAVGKLTNRPWFNRCWTFQE 203
                 777777775555555555566666666667777778888**************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (706 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4922.34
//
Query:       KHJ31214.1  [L=1295]
Description: putative signal transducer protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.019   14.8   0.2      0.061   13.2   0.2    1.9  1  Homeodomain  Homeodomain


Domain annotation for each model (and alignments):
>> Homeodomain  Homeodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   3.4e-06     0.061       8      50 ..     745     788 ..     742     791 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.4e-06
                  -HHHHHHHHHHHHH.SSS-SHHHHHHHHHHHTS-HHHHHHHHHH CS
  Homeodomain   8 tkeqleeLeklFee.nrypsaeereeLAkklgLeerqVkvWFqN 50 
                  +++q+++Le++  + ++ p + +  +++++l++e ++V++W  N
   KHJ31214.1 745 EPSQTDTLENVLLSsEQPPYEIQDNQISSELKMERKNVSNWVEN 788
                  689********9986888889999*****************777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1102  (0.0614647); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.81u 0.27s 00:00:01.08 Elapsed: 00:00:00.43
# Mc/sec: 8973.11
//
Query:       KHJ31215.1  [L=474]
Description: putative n amino acid transport system protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-53  181.6  35.9    2.2e-53  181.4  35.9    1.0  1  Aa_trans  Transmembrane amino acid transporter protein


Domain annotation for each model (and alignments):
>> Aa_trans  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.4  35.9   1.2e-57   2.2e-53       2     407 ..      53     452 ..      52     454 .. 0.87

  Alignments for each domain:
  == domain 1  score: 181.4 bits;  conditional E-value: 1.2e-57
    Aa_trans   2 tssalsavlnlikaivGaGvLaLPyAfkqlGlivGlillllvallslytlllLvkcsktlasgkrnksYgdlgyrllGpkgkliidlailvqlfGvgvs 100
                 + ++++ +++li ++++ G L+LP Af++lGl++G+il ++++++ +yt++++ +++  +   ++ ++Y d+g+ l+G  g+ +i++++++ql+ v+ s
  KHJ31215.1  53 RLGWKRLTVVLIVEAIALGSLSLPSAFATLGLLPGVILCVFIGFVAIYTSYVIGQVKIAY---PQVSHYTDVGRLLMGNFGYELISVMFVMQLLSVTGS 148
                 56899****************************************************987...5*********************************** PP

    Aa_trans 101 yliligdllpaifesffdtlllsnvyfilisaliiipLslipnlskLsylSllalvsslyy.....ivilvlvvaelvklelkgvseetv......... 185
                 + ++ ++ + +i +      + ++v f++isal +++ ++ p++s+L ++ ++ + s++++     i ++v+ + +  + +++g     +         
  KHJ31215.1 149 HSLTGAIAFGNISDH-----KACSVAFSAISALLLFLVAIPPSFSELAIFGYIDFASIIIAigitmIGTGVAWSRSENVASATG-----Alasspwsyw 237
                 **************6.....89*********************************99998666544222222222222222222.....1334568888 PP

    Aa_trans 186 .kkasklkglflaigiivFAftghavlleiqnelkdpskfkkmtkvlllsiilatvlyilvGlvGYltFGnevkgnillnlpkss...ilivivnlllv 280
                  k+ +++ + f a+g+i+FA+ ++ + +++++e+++p +f+   k++ +  i+ +v+y+++G +   + Gn+v++ +ll+ +++    ++ v+  ++  
  KHJ31215.1 238 pKEGLTFVEGFVALGNIIFAYCFAVCQFSFMDEMHTPTDFP---KSVWALGIIEMVIYTVTGTTILIFVGNDVQSPALLSAGPTLskvAFGVALPVI-- 331
                 899**************************************...9************************************9997444444444444.. PP

    Aa_trans 281 lhlilsfplqlhplrqvvenllikkeavagasekeapkskllrlvirlllvvityliAlsvpslakvlslvGatsstplsfilPalfhlkliktekksl 379
                    ++s +++ +++ ++++  +  k   +++   +++  +  ++++ +++++i +liA s+p+++++ls++++++++ ++f++Pa++++kl k+     
  KHJ31215.1 332 ---FISGSINTTVAARYIHGRVYAK---SPNRFINTKQGWITWIITVSIITLIGWLIAESIPFFDDLLSITSSLLISGFTFYFPAWMWFKLVKKGPCLS 424
                 ...4555566666666666655433...5556699999999999999999*******************************************999888 PP

    Aa_trans 380 eklvkkkildlicivlglllvfyglavl 407
                 ++ ++ +i++ i++ +g++++f+g++ +
  KHJ31215.1 425 KENILLSIVNAIVFLIGMMVLFAGTYSS 452
                 8899999*****************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       766  (0.0427241); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.21s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 3767.00
//
Query:       KHJ31216.1  [L=285]
Description: hypothetical protein EV44_g5741 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.033   14.1   1.5      0.068   13.1   1.5    1.5  1  PsbY      Photosystem II protein Y (PsbY)


Domain annotation for each model (and alignments):
>> PsbY  Photosystem II protein Y (PsbY)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.5   3.8e-06     0.068       6      21 ..     242     257 ..     241     258 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.8e-06
                 HHHHHHHHHHHHHHHH CS
        PsbY   6 LiVLaPillAagWAlf 21 
                  iV +Pi+++ +W+lf
  KHJ31216.1 242 AIVALPIVIVTSWVLF 257
                 69*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1133  (0.0631937); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2131.93
//
Query:       KHJ31217.1  [L=151]
Description: hypothetical protein EV44_g0196 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1178.04
//
Query:       KHJ31218.1  [L=1371]
Description: putative dna repair protein rad50 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-31  110.5   0.5    1.5e-31  110.5   0.5    8.1  5  AAA_23        AAA domain
    8.5e-14   51.5  21.7    7.7e-08   32.0   0.0    3.6  3  SMC_N         RecF/RecN/SMC N terminal domain
    1.3e-08   35.1  11.9    0.00016   21.6   0.0    4.3  4  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
    2.2e-08   34.2  24.5    2.2e-07   30.9  16.0    5.5  3  AAA_15        AAA ATPase domain
    4.6e-05   23.6   0.0    0.00012   22.3   0.0    1.7  1  SbcCD_C       Putative exonuclease SbcCD, C subunit
  ------ inclusion threshold ------
      0.017   15.5   2.5       0.13   12.7   0.0    3.4  3  AAA_16        AAA ATPase domain
      0.054   13.3   0.0       0.12   12.1   0.0    1.5  1  AAA_29        P-loop containing region of AAA domain
       0.24   11.4   4.0         12    5.9   0.0    4.4  4  AAA_5         AAA domain (dynein-related subfamily)
       0.28   11.5   9.2       0.84    9.9   0.0    3.8  3  AAA_22        AAA domain


Domain annotation for each model (and alignments):
>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.5   0.5   7.3e-35   1.5e-31       1     199 [.      67     293 ..      67     325 .. 0.73
   2 ?  -21.7  37.4         9   1.8e+04      72     191 ..     301     492 ..     290     504 .. 0.46
   3 ?  -56.4  72.7         9   1.8e+04      60     176 ..     847     961 ..     490    1021 .. 0.69
   4 ?  -13.5  30.2         9   1.8e+04      52     196 ..     919    1100 ..     916    1176 .. 0.68
   5 ?   -2.6   0.2       3.2   6.3e+03     114     145 ..    1305    1338 ..    1295    1369 .. 0.57

  Alignments for each domain:
  == domain 1  score: 110.5 bits;  conditional E-value: 7.3e-35
      AAA_23   1 kLkienfrsfrdqe...idFskgltlItGpNGaGKTTildAiklaLygetprlsrksgrgfeksdveiesegkvkayveltfenkdgrytrsiererel 96 
                 +Lki+++rsf++q+   i+F  +ltlI+G+NG+GKT+i++++k+a +g+ p++    ++g++ +d++++ e+++ + v+l+f n +  +   ++r+++l
  KHJ31218.1  67 RLKIQGIRSFDNQHpeyINFYAPLTLIVGQNGCGKTSIIECLKYASTGQQPPNT---KGGAFIHDPKLSGEKETLGHVKLEFLNASQNK-LVVSRTISL 161
                 79********8876668*******************************876544...579*********************99977753.566667777 PP

      AAA_23  97 skkkgkttkka.............klelleideleqfisellgskkiilnlilflgqer.....feefelkdkkerleelekeleeledekk...llek 174
                 + kk+  t+k+              + ++++++ +++++ ++g++ + l++++f++q++     +e+++lk+k++++ +++k ++ +e+++k   l ++
  KHJ31218.1 162 TTKKTGVTQKTldctllmhnhgerHTMSTRVADMDRIVPAQMGVTAAVLDNVIFCHQDDslwpmAEPQKLKEKFDKIFDAQKYTKAIENMIKmrkLHKD 260
                 7777766666666666665555334445555999***************66666666666666655555688888666665555555555542215555 PP

      AAA_23 175 l........eqekekekeleeleeeleeilkel 199
                 +         + k  +++ ++++++l +++ e+
  KHJ31218.1 261 ElgklviheANNKAMKEKADKVQRRLLSLEAEI 293
                 599999987333444445555555554444444 PP

  == domain 2  score: -21.7 bits;  conditional E-value: 9
      AAA_23  72 kay...veltfenkdgry...........trsiererelskkkgkttkkaklelleideleqfisellgskkiilnlilflgqerfeefel...kdkke 153
                 ++y   ++l  e +++++             + +r+r + +k+   t ka+le+l++  +++ +++ l++ ++++ ++ ++  e++ ++++   +   +
  KHJ31218.1 301 ETYnlnIKLASEETKKKKiasikalgtieELRTKRDRAEGYKSFLATLKADLEELQD--SDEWLQSTLDKYEERMAQYHLQSLENQSKIQElqrA---Q 394
                 444434444444444444556656333221222222222233333333444444433..223333333333333333333333332222221111...1 PP

      AAA_23 154 ..........................................................rleelekeleeledekkllekl..eqekekekeleeleee 191
                                                                            +e+++k ++e+  e ++ +kl  e++ + ++el++le++
  KHJ31218.1 395 tasrqacaekqteiglhqaeqksyeiqvetrsqlireiaqkytikgfegdlnedqisrFMEKFQKLIQEKDRELDQAKKLtnEKLHKIRDELTALENR 492
                 22233333333456666665556666666777777777777777777777777755555555555555555555555555445555556666666555 PP

  == domain 3  score: -56.4 bits;  conditional E-value: 9
      AAA_23  60 ksdveiesegkvkayveltfenkdgry...trsiererelskkkgkttkkaklelleideleqfisellgskkiilnlilflgqer............. 142
                 k+d            +e+  +n +++    +++++++ e +k ++++++ ++  ++                          ++ +             
  KHJ31218.1 847 KQD------------IEILSSNVNDIVkyyKENLKYMEEINKLSSQKKSSSNCLSV--------------------------QEIQekssrcdeklhav 907
                 222............22222222222122222222222222222222222222222..........................11111111111111111 PP

      AAA_23 143 ...................feefelkdkkerleelekeleeledekkllekl.e 176
                                      e+e  + k++l++ e  le+++   k +++l e
  KHJ31218.1 908 rkkieklmidknnanseisSLEIEVGNIKQKLNSTEFLLEKKNSLLKAIDELrE 961
                 111111111110011111111111111111222222222222222222222221 PP

  == domain 4  score: -13.5 bits;  conditional E-value: 9
      AAA_23   52 rksgrgfeksdveiesegkvkayveltfenkdgrytrsiererelskkkgkttkkaklellei..................deleqfisellgskki 130 
                  ++ ++ + + ++e+++ +++ ++ e+ +e+k+    + i++ re sk++ ++ +ka+ +l +                   + + ++i++  +++ +
  KHJ31218.1  919 NNANSEISSLEIEVGNIKQKLNSTEFLLEKKNSLL-KAIDELREDSKSQRDSMRKADMQLESLipqfskikamhddvqrrgEIQAKEIQKDKDKQSQ 1014
                  44466778888999999999999999999998876.6666666666655555555533333333346444334444433333333444444444444 PP

      AAA_23  131 ilnlilflgqerfeefelkdkke.............rleelekeleeledekkllekleqekekek.......eleeleeeleeil 196 
                  +ln +++  ++ +++ e+  +++             + +++e+e+ + ++++k l+ +++  ek k       ++ +  ++le ++
  KHJ31218.1 1015 SLNKLVMVVKDINKYVENGGPEKlvvcrreiydlekAQKSIENEIAQVTQDEKSLNSHINDSEKIKrsimsniRYRKALKDLEITN 1100
                  77777777777777777744444666655444444477777777777777777777777666666666666663333333333333 PP

  == domain 5  score: -2.6 bits;  conditional E-value: 3.2
      AAA_23  114 ideleqfisellgskki..ilnlilflgqerfee 145 
                  i++l + ++++++s+ +  +++li++ ++e+f  
  KHJ31218.1 1305 INALAESLNRIIHSRRRqsNFQLIIITHDEEFLQ 1338
                  4566666667666555533667777777777432 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0   3.9e-11   7.7e-08       2     100 ..      65     162 ..      64     190 .. 0.77
   2 ?   -1.4   1.0      0.65   1.3e+03      88     129 ..     413     456 ..     373     694 .. 0.78
   3 !   25.0  11.0   5.7e-09   1.1e-05      81     206 ..     914    1343 ..     868    1355 .. 0.91

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 3.9e-11
                 EEEEEEESETTEECEE.EEEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--.BTTCSSTTEEEEEEEEEETTEESSSSSSCEE CS
                 xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N   2 lkrleienFksyagkt.vilpfsksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihk.skekasvkkaeveitfdnedkklkiekeevs 98 
                 ++rl+i++ +s+ +++   ++f   +t ivG+NG+GK+++++ +++    +   +  ++k  + ih  + ++++ + ++v++ f n +++  + +  +s
  KHJ31218.1  65 ISRLKIQGIRSFDNQHpEYINFYAPLTLIVGQNGCGKTSIIECLKYASTGQ---QPPNTKGGAFIHDpKLSGEKETLGHVKLEFLNASQNKLVVSRTIS 160
                 899*********87652679*************************986643...457889999999987888999999999999776666333333333 PP

                 EE CS
                 xx RF
       SMC_N  99 is 100
                 ++
  KHJ31218.1 161 LT 162
                 32 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.65
                 EESSSSSSCEEEEEEEETTSEEEEEETTEEE-H..HHHHHHHHC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxx RF
       SMC_N  88 kklkiekeevsisrrvkrkgeseykingkevtk..kevselles 129
                 +++k  + +v+++ +++r+  ++y+i+g e      ++s+++e+
  KHJ31218.1 413 AEQKSYEIQVETRSQLIREIAQKYTIKGFEGDLneDQISRFMEK 456
                 22223455566667777777777777776554421456666555 PP

  == domain 3  score: 25.0 bits;  conditional E-value: 5.7e-09
                  EEEEETTEESSSSSSCEEEEEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT.......................................... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......................................... RF
       SMC_N   81 itfdnedkklkiekeevsisrrvkrkgeseykingkevtkkevsellesagiske.......................................... 135 
                  +++d+++++++i++ e+++   +++ +++e+ +++k+   k + el e+++ +++                                          
  KHJ31218.1  914 LMIDKNNANSEISSLEIEVGNIKQKLNSTEFLLEKKNSLLKAIDELREDSKSQRDsmrkadmqleslipqfskikamhddvqrrgeiqakeiqkdkd 1010
                  4557777778888899999999999999999999999999999999988888888999999999999999999999********************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ31218.1 1011 kqsqslnklvmvvkdinkyvenggpeklvvcrreiydlekaqksieneiaqvtqdekslnshindsekikrsimsniryrkalkdleitnqeilele 1107
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ31218.1 1108 eriryedadrlvqehlaaetrgqdlmaergplvgkmgakdseltalikewetdykdagqkykemhikvettkaaiedvikcihavdsavmkyhtlkm 1204
                  ************************************************************************************************* PP

                  ..........................................................CS-HHHHHHHHHHHHHHHHCCS--S..EEEECTTTTTS- CS
                  ..........................................................xxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxx RF
       SMC_N  136 ..........................................................lLSgGektLvalaLlfAiqkvkpap..lyllDeidaaLD 172 
                                                                              S G++ L+++ +++A+ ++   +  +  lDe   +LD
  KHJ31218.1 1205 eeinaiagdlwtstyqgtdidtimirsenetssttttkrnynyrlcmvkqdaeldmrgRCSAGQRVLASIIIRLALAECFGVScgVIALDEPTTNLD 1301
                  ***************************************************************************9998654423788********* PP

                  HHHHHHHHHHHH......HHCTTSEEEEE-SSHHHCCC-..S CS
                  xxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxx..x RF
       SMC_N  173 eknvkkvaellk......eksknaQfivislreemleka..d 206 
                   +n++++ae l+      ++++n+Q+i+i+++ee+l+ +  +
  KHJ31218.1 1302 RENINALAESLNriihsrRRQSNFQLIIITHDEEFLQAMkcN 1343
                  ********987544444456778************9988444 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   7.8e-08   0.00016       1      63 [.      90     146 ..      90     171 .. 0.76
   2 ?   -0.3   0.7      0.38   7.6e+02     131     216 ..     444     528 ..     416     579 .. 0.67
   3 ?    0.4   1.7      0.23   4.5e+02      87     207 ..     774     896 ..     761     929 .. 0.85
   4 !   16.5   0.0     3e-06    0.0059     220     302 ..    1246    1337 ..    1033    1338 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 7.8e-08
      AAA_21   1 lnvliGpNgsGKSnLLdaldllarldrdvegltdelsggggirkipslldlydpeipfefeie 63 
                 l++++G Ng+GK++++++l+++    + +++ +++    g ++ +p+l+ ++++ + +++e+ 
  KHJ31218.1  90 LTLIVGQNGCGKTSIIECLKYA---STGQQPPNTKG---GAFIHDPKLSGEKETLGHVKLEFL 146
                 69*****************999...55666666555...577777777777777777777766 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.38
      AAA_21 131 svsepndlqfgkaltditsrawsllllldglrkerigllnifadyfgfakekrllqrlvrslklveielsdlgegeeliasvderl 216
                  ++e+++  f++ + +++ ++++ l+   +l + ++++      ++ ++++  ++q+ ++s + ++ ++s + e+ ++ + +d+++
  KHJ31218.1 444 DLNEDQISRFMEKFQKLIQEKDRELDQAKKLTN-EKLHKIRDELTALENRKAIRIQEKLNSKDAINTNDSRIIERQREADAIDVDE 528
                 567788888888888888888888888888755.4444444444455555555555555555555555555555555555555444 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.23
      AAA_21  87 lssvetllesgllldkrsleeedvfnpeargirggvsvfslkelsvsepndlqfgkaltditsrawsllllldglrke..rigllnifadyfgfakekr 183
                 ++ ve++ +  l + +++l++ +++ p+++++ ++  +  +++++v+++++++ + ++ +  ++  s  ++ +++  e   +++++i++ y    k  +
  KHJ31218.1 774 KKYVEERARQDLEDLEKDLRRANAVRPQYETFNKLFLEIPSIQKEVKDMEIKKLELLAARENWDSISNDKMTEKQDIEilSSNVNDIVKYYKENLKYME 872
                 5667888888999999********************************************999999999999999998988888888888888888888 PP

      AAA_21 184 llqrlvrslklveielsdlgegee 207
                  + +l+++ k   ++ls  +++e+
  KHJ31218.1 873 EINKLSSQKKSSSNCLSVQEIQEK 896
                 888888887776666666666555 PP

  == domain 4  score: 16.5 bits;  conditional E-value: 3e-06
      AAA_21  220 gvvflengdgqelparel.SdGtkrllalltallralkkg...sllliDEpEngLHPkllrrllell.....kelsr...ngaQviltTHSplll 302 
                  ++++   +++ el++r   S G++ l+ ++  l+ a   g   +++++DEp ++L+ + +  l+e l     +   r    + Q+i+ TH+ ++l
  KHJ31218.1 1246 NYRLCMVKQDAELDMRGRcSAGQRVLASIIIRLALAECFGvscGVIALDEPTTNLDRENINALAESLnriihS---RrrqSNFQLIIITHDEEFL 1337
                  5555555666666666667888888888888888888788999*********************999864441...356678********98765 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9  16.0   1.1e-10   2.2e-07       3     287 ..      65     498 ..      64     528 .. 0.59
   2 ?  -25.4  51.3         9   1.8e+04     119     296 ..     802    1018 ..     538    1038 .. 0.59
   3 !   18.0   1.2   9.2e-07    0.0018     138     368 ..    1052    1336 ..    1024    1337 .. 0.64

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 1.1e-10
      AAA_15   3 IkkikikNFRslkd...veidlseeltvliGkNnsGKSsilealdlFlnnkekkn............................................ 54 
                 I+++ki+  Rs+++    +i++   lt+++G N++GK+si+e l++  + +++ n                                            
  KHJ31218.1  65 ISRLKIQGIRSFDNqhpEYINFYAPLTLIVGQNGCGKTSIIECLKYASTGQQPPNtkggafihdpklsgeketlghvkleflnasqnklvvsrtisltt 163
                 8889999999998865678999999*******************9999988777799999999999999998888777777777775555555555555 PP

      AAA_15  55 ..................................................................kkvikiekedleifeniseskdikIdvef.... 83 
                                                                                   k + k++k +  ++  ++ +++ik ++      
  KHJ31218.1 164 kktgvtqktldctllmhnhgerhtmstrvadmdrivpaqmgvtaavldnvifchqddslwpmaepqKLKEKFDKIFDAQKYTKAIENMIKMRKLHkdel 262
                 555555555555555555555555555555555555555555555555555555555555555555444444444444444444444444444445554 PP

      AAA_15  84 ......aekekakeyektlkskekkk..adlllkkkesdlkktikdkklklkknelsdekisvekkks..........kkelpkekeeklekekeelki 164
                       +    a++  k++k+k++k   + l l+ +++++   i++ +l++k     ++k+++  +k+          +   + +k++ ++++ +  ++
  KHJ31218.1 263 gklvihE----ANN--KAMKEKADKVqrRLLSLEAEIDSIRGEIETYNLNIKLASEETKKKKIASIKAlgtieelrtkRDRAEGYKSFLATLKADLEEL 355
                 4444321....222..22222222220033344555555555555555555555555555555555558877777776444555555555555555555 PP

      AAA_15 165 d..kedlkklikkleeslkkee.......elknvlksaiiklllisakRnvsd...edsekkssllgklkekileealqekl.........eeeltekl 242
                 +  +e l+++++k+ee + ++        ++ + l+ a++ ++   a+++ +    + ++k+ ++  ++ +++++e++q++          e+++ +  
  KHJ31218.1 356 QdsDEWLQSTLDKYEERMAQYHlqslenqSKIQELQRAQTASRQACAEKQTEIglhQAEQKSYEIQVETRSQLIREIAQKYTikgfegdlnEDQISRFM 454
                 544666788888888877777777776663333333333333333333333324556666666677777777777777777678888888888888888 PP

      AAA_15 243 keiqeklkeidkklaeelkkilkkkidkikkfnykgkkneeieik 287
                 +++q+ ++e+d +l++ +k   ++k+ ki ++    ++   i+i+
  KHJ31218.1 455 EKFQKLIQEKDRELDQAKK-LTNEKLHKIRDELTALENRKAIRIQ 498
                 9999999999999955555.4444444444444444444333333 PP

  == domain 2  score: -25.4 bits;  conditional E-value: 9
      AAA_15  119 ikdkklklkknelsdekisvekkks.....kkelpkekeeklekekeelkidkedlkklikkleeslkkee...elknvlksaiiklllisakRnvs 207 
                  +++++  + ++  +++ +++ ++k+     ++e  ++ ++++ +ek++++i +++++++ k ++e+lk+ e   +l++  ks++ +l + + + ++ 
  KHJ31218.1  802 YETFNKLFLEIPSIQKEVKDMEIKKlellaARENWDSISNDKMTEKQDIEILSSNVNDIVKYYKENLKYMEeinKLSSQKKSSSNCLSVQEIQEKS- 897 
                  222222222233333333333333345555444444455566666667777777777777766677766664442222222222222222222111. PP

      AAA_15  208 dedsekkssllgklkekileealqekl..............eeelteklkeiqeklkeidkklaeelk.............kilkkkidkikkfnyk 277 
                   ++ ++k  +  k++ek+  ++++                 ++++te l e +++l +++++l e+ k             ++l++ ++kik ++  
  KHJ31218.1  898 -SRCDEKLHAVRKKIEKLMIDKNNANSeissleievgnikqKLNSTEFLLEKKNSLLKAIDELREDSKsqrdsmrkadmqlESLIPQFSKIKAMHDD 993 
                  .222222333333333333332222223333344444444444444444444444444444444444455557777776667777777777777777 PP

      AAA_15  278 gkkneeieik......ddeelplnk 296 
                  ++   ei+ k      d+++++lnk
  KHJ31218.1  994 VQRRGEIQAKeiqkdkDKQSQSLNK 1018
                  7777666666666655555555544 PP

  == domain 3  score: 18.0 bits;  conditional E-value: 9.2e-07
      AAA_15  138 vekkkskkelpkekeeklekekeelkidkedlkklikkleeslkkeeelknvlksaiiklllisakRnvsd.edsekkssllgklkekileealqek 233 
                   + ++++    +  e++l++ +++ ++ k ++ + i+ +++ lk  e  ++ + ++ + +++  a+R v++    e     l++    ++ + +++ 
  KHJ31218.1 1052 QKSIENEIAQVTQDEKSLNSHINDSEKIKRSIMSNIR-YRKALKDLEITNQEILELEERIRYEDADRLVQEhLAAETRGQDLMAERGPLVGKMGAK- 1146
                  2222222222222222333333333333333333333.2333333334444555555556666666665553334444455555555555554444. PP

      AAA_15  234 leeelteklkeiqeklkeidkkla.eelk........kilkkkidkik..kfnykgkkneeieik................................ 287 
                   + elt  +ke ++++k++ +k++ +++k        ++++k i  ++   ++y   k eei+                                  
  KHJ31218.1 1147 -DSELTALIKEWETDYKDAGQKYKeMHIKvettkaaiEDVIKCIHAVDsaVMKYHTLKMEEINAIagdlwtstyqgtdidtimirsenetssttttk 1242
                  .666777777777776666555530333366667799666666666553355555555555555588888888888888888888************ PP

      AAA_15  288 .........ddeelplnknG...sGvqrllllillileaekkdekeeknvilliEEPEahLHpqaqkvlikllkelandnkt....QviitTHSphi 368 
                            +++ +l+++G    G++ l ++i+ ++ ae       +  +++++EP ++L  ++ + l+++l +++ + +     Q+ii TH + +
  KHJ31218.1 1243 rnynyrlcmVKQDAELDMRGrcsAGQRVLASIIIRLALAECF---GVSCGVIALDEPTTNLDRENINALAESLNRIIHSRRRqsnfQLIIITHDEEF 1336
                  *********666666666653337******************...99********************************99999*********9876 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   5.8e-08   0.00012       8      88 ..    1243    1312 ..    1237    1314 .. 0.84

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 5.8e-08
     SbcCD_C    8 nylsfevevrdedgkekelsrssgtlSGGekqflaylalaaalaalyssaegrepalrlvfLDEAFsklDeesiatllell 88  
                  +++++ + ++++ ++e    +++g+ S G++ +la++++ +ala  ++       ++++++LDE   +lD e+i++l e l
  KHJ31218.1 1243 RNYNYRLCMVKQ-DAE---LDMRGRCSAGQR-VLASIIIRLALAECFGV------SCGVIALDEPTTNLDRENINALAESL 1312
                  455666666633.333...6899********.*****************......6*******************999877 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   6.3e-05      0.13      25      50 ..      89     114 ..      81     134 .. 0.82
   2 ?   -0.5   1.1      0.72   1.4e+03     106     127 ..     409     461 ..     342     523 .. 0.58
   3 ?   -3.2   0.0       4.6   9.2e+03     107     135 ..    1296    1324 ..    1261    1331 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 6.3e-05
      AAA_16  25 elvllsGesGvGKsslvrellralek 50 
                 +l+l++G+ G+GK+s++++l+ a ++
  KHJ31218.1  89 PLTLIVGQNGCGKTSIIECLKYASTG 114
                 689***************99965554 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.72
      AAA_16 106 a...........................avpelagaea....srllellkrll 127
                 +                            ++  +g++     sr+ e++++l+
  KHJ31218.1 409 GlhqaeqksyeiqvetrsqlireiaqkyTIKGFEGDLNedqiSRFMEKFQKLI 461
                 13444444444444433333333333442222222222444466666666665 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 4.6
      AAA_16  107 avpelagaeasrllellkrll.allsrder 135 
                  ++ +l+++  ++l+e l+r++ ++ ++ + 
  KHJ31218.1 1296 PTTNLDRENINALAESLNRIIhSRRRQ-SN 1324
                  555667777799999999999433333.33 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   6.2e-05      0.12      22      49 ..      87     115 ..      66     120 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 6.2e-05
      AAA_29  22 kg.atlltGpsGsGKSTllDAiqalLvpa 49 
                     tl++G++G GK++++  +++  +++
  KHJ31218.1  87 YApLTLIVGQNGCGKTSIIECLKYASTGQ 115
                 44579**************9888766665 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.006        12       3      24 ..      92     115 ..      91     123 .. 0.82
   2 ?    2.8   0.1     0.053   1.1e+02      18      83 ..     608     692 ..     600     700 .. 0.63
   3 ?   -2.8   0.1       2.9   5.8e+03      33      95 ..     714     783 ..     706     802 .. 0.61
   4 ?   -0.9   0.0      0.76   1.5e+03      78     111 ..    1304    1337 ..    1257    1358 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.006
                 EEE--SSSSHHHHHHHGGGGB..S CS
       AAA_5   3 lLvGppGtgKselaerlaaal..n 24 
                 l+vG+ G+gK++++e l+ a   +
  KHJ31218.1  92 LIVGQNGCGKTSIIECLKYAStgQ 115
                 89*************999886544 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.053
                 HGGGGB..S--EEEEE--TT--HHHHH--B--.........--------.......................G-SEEEEESGGG--HHHHH CS
       AAA_5  18 rlaaal..nreveyvqltrdtteedlkgrreikngttslvdsplvraar.......................egeilvlDEveraesevln 83 
                 +l a++  ++e ++  l++d+t+e+l  r +   +    + ++lv+a r                       +      DE++r+e+ vl+
  KHJ31218.1 608 SLEAMIdaCNEKLTTVLNQDWTPEKLEKRFQ---DVLDEKSKALVDATRkrdlaerelldhefklsticanlK---SKTDEIKRCEKVVLS 692
                 45555599899999999*********99998...455555556666655555556666666665444442221...224666666666655 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 2.9
                 -TT--HHHHH--B--.........--------.........G-SEEEEESGGG--HHHHHHHHHHHHSSEEE CS
       AAA_5  33 trdtteedlkgrreikngttslvdsplvraar.........egeilvlDEveraesevlnsLlslleerrll 95 
                    t++++l++ +  ++  +++ +++l++ +r         ++    l+ v  aes++ n L ++ eer ++
  KHJ31218.1 714 AIETERDELRQDLGSMSVVREYYEKSLTT-IRdqnccrlceRKFANALEKVS-AESKIENLLKKYVEERARQ 783
                 55667777776666554555555555542.2223444444377777777777.8888888888888888776 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 0.76
                  -.HHHHHHHHHHHHSSEEE..-SSSEEE---..... CS
       AAA_5   78 e.sevlnsLlslleerrllleeggelvkakndd.ll 111 
                  +  + ++sL+++++ rr++  ++++l+    d+ +l
  KHJ31218.1 1304 NiNALAESLNRIIHSRRRQ--SNFQLIIITHDEeFL 1337
                  54577899999**999999..666666555555455 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00042      0.84       5      33 ..      88     116 ..      84     212 .. 0.63
   2 ?    2.6   3.0     0.075   1.5e+02      27     113 ..     398     483 ..     374     500 .. 0.77
   3 ?   -1.6   0.1       1.5   2.9e+03      93     130 ..    1289    1332 ..    1272    1339 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00042
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeea 33 
                 a +++++G+ G+GKT  ++ l++  + ++
  KHJ31218.1  88 APLTLIVGQNGCGKTSIIECLKYASTGQQ 116
                 6789***************9999864332 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.075
      AAA_22  27 eqldeeakaee...erpevvfvtlpsstsskdllrellralglelka...erlsseellealeqalraravielliiDEaqhlrseealeeLr 113
                 +q+++e++  e   +++e+ +++++++t +++l re++++++ ++ +   ++++ ++++e++++ ++++++     +D a +l ++e l ++r
  KHJ31218.1 398 RQACAEKQT-EiglHQAEQKSYEIQVET-RSQLIREIAQKYTIKGFEgdlNEDQISRFMEKFQKLIQEKDR----ELDQAKKL-TNEKLHKIR 483
                 344443333.25899999999***9999.99999********99999********************9999....56777776.555555544 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 1.5
      AAA_22   93 elliiDEaqh.lr.s.....eealeeL.rsllnlsrkgvqliLvGt 130 
                  +++ +DE    l+ +     +e l+ + +s+   +++++qli++ +
  KHJ31218.1 1289 GVIALDEPTTnLDrEninalAESLNRIiHSRR--RQSNFQLIIITH 1332
                  56777776666743123344555555534444..588999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2435  (0.135813); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.62u 0.34s 00:00:01.96 Elapsed: 00:00:00.57
# Mc/sec: 7249.70
//
Query:       KHJ31219.1  [L=387]
Description: putative upf0658 golgi apparatus membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       848  (0.0472977); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2856.21
//
Query:       KHJ31220.1  [L=583]
Description: putative pheromone processing endoprotease protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      3e-24   84.8   0.8    6.4e-24   83.8   0.8    1.6  1  P_proprotein  Proprotein convertase P-domain
    6.2e-21   74.9   0.4    1.2e-20   74.0   0.4    1.4  1  Peptidase_S8  Subtilase family


Domain annotation for each model (and alignments):
>> P_proprotein  Proprotein convertase P-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.8   0.8   7.1e-28   6.4e-24       1      86 []     224     310 ..     224     310 .. 0.97

  Alignments for each domain:
  == domain 1  score: 83.8 bits;  conditional E-value: 7.1e-28
                   EEEEEEEEEEEESSGGGEEEEEE-TTS-EEEEE---TT---SS-EEEEEEEESTTTTS---EEEEEEEEE.SSTT--EEEEEEEEEE CS
  P_proprotein   1 lehvqvsvnithtrrgdlritLvsPsGtrsvLlnrrgkdksrsgfldwtfmsthlwgeraeGeWkLevkd.seeedtgtlkswkLrl 86 
                   +ehv+v++ni+h +rgdl+++L+sP++ +s+L   r +d s +g++dwtfms+ +wge+  G+W++ vkd + ++ +gt+ +w L+l
    KHJ31220.1 224 VEHVTVTMNIKHGKRGDLSVDLISPANLVSHLSVIRHQDFSVDGYNDWTFMSVLHWGESGIGNWTVVVKDtEVNKYNGTFIDWHLKL 310
                   79********************************************************************8888889*******986 PP

>> Peptidase_S8  Subtilase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.0   0.4   1.3e-24   1.2e-20     146     298 .]      15     164 ..       3     164 .. 0.85

  Alignments for each domain:
  == domain 1  score: 74.0 bits;  conditional E-value: 1.3e-24
                   HHHHHH.CCT-EEEEE--SS-T-HHEEE-TTCEECTTTSTTCEEEEEESTTSSB-TT--B-TT.......-EEEE-S-..CCCCCCCCCHHHTTTHH CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxx RF
  Peptidase_S8 146 ainravnkkgvlvviSaGNngktgsslqagspvgtpstsknvitvgayttegkiapfSsrGpssdgklkpdivapGgn..ivstwsrqsnnsaglss 240
                   a+++++   g+++v+++GN   +++  +++ +++t+s +   itvga++ +g   ++S++++++       +++  g+   ++t +  + n++    
    KHJ31220.1  15 AVQNGRGGLGSIYVFASGNGAANED--NCNFDGYTNSIYS--ITVGAIDRKGLHPYYSEKCSAQL-----VVTYSSGSgdAIHTTGVGK-NQC---- 97 
                   889999889************9999..**********999..*********************97.....5555555533455544444.333.... PP

                   EEEE-SHHHCHHHHHHHHHHHHHHHTT--HHHHHHHHHCCS-EE...............SSSSSSTT CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxx RF
  Peptidase_S8 241 yqsmsGTSmAsPnaagaaAlllsalpkltpetvraallntAqdl.........gkadniesfaqGaG 298
                   y  + GTS+A+P+aag++Al+l+  p+l++++++ +++ tA ++          ++    s+++G+G
    KHJ31220.1  98 YSGHGGTSAAAPLAAGIFALVLQVRPDLSWRDMQYLVMETAVPIaldtgewqaTAKGLKFSHIYGYG 164
                   8899**************************************9999999998766666788888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (583 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       733  (0.0408835); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 4079.50
//
Query:       KHJ31221.1  [L=633]
Description: putative mboat family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-42  144.0  18.0      7e-42  144.0  18.0    1.9  3  MBOAT     MBOAT, membrane-bound O-acyltransferase family


Domain annotation for each model (and alignments):
>> MBOAT  MBOAT, membrane-bound O-acyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.7   3.0         1   1.8e+04     286     304 ..      71      89 ..      71      90 .. 0.86
   2 ?   -1.9   0.2     0.094   1.7e+03     272     299 ..     185     211 ..     178     243 .. 0.75
   3 !  144.0  18.0   3.9e-46     7e-42      49     345 ..     278     580 ..     211     583 .. 0.83

  Alignments for each domain:
  == domain 1  score: -6.7 bits;  conditional E-value: 1
       MBOAT 286 glalgyliwfvlrvllllv 304
                 +++++y++++v  +++++v
  KHJ31221.1  71 EFYFYYVVFIVIVPYMFWV 89 
                 7899999999999999987 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.094
       MBOAT 272 latlatFlfsAvwHglalgyliwfvlrv 299
                 + +++ Fl++   Hg++    i+f+l+ 
  KHJ31221.1 185 FDVGFAFLYLTCLHGFSI-AKIFFILYI 211
                 667889999999999999.555566655 PP

  == domain 3  score: 144.0 bits;  conditional E-value: 3.9e-46
       MBOAT  49 kellklllisyfvvgflel.................klhslslvfrklasaallsklpslleylgYvffyplllvGPilsyseymsfvesplsrllyta 130
                 +++ +l++i+  ++ +++l                 +l +l l++r + +  ++ +++s+ +yl+Y++++pl+l+GPi+++++y s++++   +++   
  KHJ31221.1 278 SRWEILFNITVLRLISFNLdyywslghrsensiekkQLDALNLSERDRITIPANPSDYSFRNYLAYSLYAPLYLAGPIITFNDYISQTKHTSASIETS- 375
                 4444555555555555555777778888888888888999999****************************************************876. PP

       MBOAT 131 krnfavalyalflgltylilieyvlskicakdftifkmlssaqllmrsvimrilllllllfllifdflglwlvalgedilsGlgvngarldrvadrniy 229
                  r +++++++l + l  +++++ +++  + k     +++ +++  + s++  ++l++l+l+ll +    ++l++l +++++ ++         +++n++
  KHJ31221.1 376 -RTIKYGFRFLLCLLATELFLHLNYCVAISKG---NPNWLDYTAAQLSLLSYFNLHVLWLKLLLP----WRLFRL-WSLIDQID---------PPENMI 456
                 .9999999999996666777775555555555...5555555666669*****************....******.*******9.........8***** PP

       MBOAT 230 gdwenavsfsefwraWNipvhkWLlryvYkplg..skkfklnks...latlatFlfsAvwHglalgyliwfvlrvllllve...klimrlvalsnlkfd 320
                 ++ +   s+  fwr W++++++WL+ry Y plg  s+k  ++++   ++++ +F+f+A+wH+++l +liw++l+vl+ l+e   ++ ++  +  n  + 
  KHJ31221.1 457 RCLSDHPSTIAFWRGWHRSFNRWLIRYLYGPLGgaSSKTWKSTVvsvFNYAVVFTFVALWHDISLNLLIWGWLIVLFMLPEvilRYLFPRRRWENHLTI 555
                 *********************************8755555554411167789*****************************333344555555677778 PP

       MBOAT 321 rrrailsnvifwlgaflgpslalll 345
                 +r ++ + v+ +l+++++ +l+ + 
  KHJ31221.1 556 YRVMCGFAVVGNLMMMMMANLVGFA 580
                 99*****************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (633 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       653  (0.0364214); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 4336.12
//
Query:       KHJ31222.1  [L=358]
Description: hypothetical protein EV44_g3931 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2740.69
//
Query:       KHJ31223.1  [L=192]
Description: hypothetical protein EV44_g4698 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1052  (0.0586759); expected 358.6 (0.02)
Passed bias filter:                      661  (0.0368676); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1298.81
//
Query:       KHJ31224.1  [L=367]
Description: hypothetical protein EV44_g3699 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-08   33.7   0.3    7.6e-08   32.6   0.3    1.6  1  rve              Integrase core domain
    5.6e-06   26.1   1.9    8.2e-06   25.6   0.3    2.0  2  gag_pre-integrs  GAG-pre-integrase domain
  ------ inclusion threshold ------
      0.012   15.6   0.0      0.033   14.2   0.0    1.7  1  Bromo_TP         Bromodomain associated
        0.1   12.2   0.0       0.18   11.4   0.0    1.3  1  HORMA            HORMA domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.3   1.7e-11   7.6e-08       5     117 ..     125     230 ..     122     232 .. 0.90

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 1.7e-11
         rve   5 gelwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpq 103
                 ++ + +D+++++  +++    +l++vd ++r+  a  l++ ++++++  l ++ ++ + g  p+++l D g++++s++f + +a + ++ +  ++   +
  KHJ31224.1 125 NYTIVIDIMYIE--GKE----VLHIVDEATRFQAARWLDNVTSKHVWDTLRQCWIDTYVGP-PDYILHDAGKTFISREFVQNAAAMSTSTKSVPVEAHW 216
                 667889999999..555....99******************77777777777788888888.************************************* PP

         rve 104 dnGkvErfhrtlkd 117
                 + G+vEr h+ l++
  KHJ31224.1 217 SIGLVERYHQVLRR 230
                 **********9997 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.55   2.4e+03      29      34 ..      29      34 ..      28      37 .. 0.91
   2 !   25.6   0.3   1.8e-09   8.2e-06       6      64 ..      41     106 ..      36     107 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.55
  gag_pre-integrs 29 rRLGHp 34
                     rR+GHp
       KHJ31224.1 29 RRFGHP 34
                     7****9 PP

  == domain 2  score: 25.6 bits;  conditional E-value: 1.8e-09
  gag_pre-integrs   6 dlssnanssvslsk...nkssinlWHrRLGHpsfsrlkkLfkkgllpglkisk....sevCeaCql 64 
                      + +s+ ++s s+s    ++ ++++ HrR+GHps +rl+++ +++  +++++sk     ++C  Cq+
       KHJ31224.1  41 SPQSLVQESFSFSEsylTEIELRRLHRRFGHPSANRLRSILERSGHDNIDKSKletlTKFCVYCQK 106
                      445777788888774555788999******************888899888885556669****96 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   7.4e-06     0.033      14      44 ..      79     108 ..      77     117 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 7.4e-06
                 HHHHHHT-SEE-HHHHHHHHHHHHHHHHHHH CS
    Bromo_TP  14 qileeaGfdsaeesaLEtLteiaqkYirelg 44 
                 +ile +G d++++s LEtLt++   Y+++ g
  KHJ31224.1  79 SILERSGHDNIDKSKLETLTKFC-VYCQKHG 108
                 599******************99.9999876 PP

>> HORMA  HORMA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.1e-05      0.18      27      77 ..      51     103 ..      44     123 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.1e-05
       HORMA  27 aFedrklsglklkiLlrgss.eeadrlldwLekGvfdaLekkyLeali.ltIy 77 
                 +F++ +l +++l+ L+r    + a+rl ++Le+   d ++k +Le+l  +++y
  KHJ31224.1  51 SFSESYLTEIELRRLHRRFGhPSANRLRSILERSGHDNIDKSKLETLTkFCVY 103
                 79*************999988*************************9647777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       520  (0.0290033); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2600.46
//
Query:       KHJ31225.1  [L=465]
Description: putative galactosyl transferase gma12 mnn10 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.1e-66  222.5   1.0    9.6e-66  221.9   1.0    1.2  1  Glyco_transf_34  galactosyl transferase GMA12/MNN10 family


Domain annotation for each model (and alignments):
>> Glyco_transf_34  galactosyl transferase GMA12/MNN10 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  221.9   1.0   5.3e-70   9.6e-66       4     239 .]     165     425 ..     163     425 .. 0.92

  Alignments for each domain:
  == domain 1  score: 221.9 bits;  conditional E-value: 5.3e-70
  Glyco_transf_34   4 eivlllvsnekkce...nssgdhelllkvikNrvdYaekhgyeifykkvsalla..eemnsvWaklpairaamkkyPeaewiWwlDqdAlimnm 92 
                      + v++l++n++      +  +++++ +++++N+++Y ++ gy+++++++++ ++  +e+++ W+k++ ir+ m+kyP+aew+WwlD +++im++
       KHJ31225.1 165 NFVIILAANQGGGVmewKGPREWAIERDSVRNKKKYVKRWGYNLEIVDMTTKKRyaHEWREGWEKVDTIRKSMQKYPKAEWFWWLDLNTVIMEP 258
                      5688888888887778999********************************99999************************************** PP

  Glyco_transf_34  93 dlsleehvlkperLeelllkntpv.............vplrryketnlvedgedvlviisqdwnglnagsflirnsewsklllDlwadpllrek 173
                      ++sl+ h++  ++L ++  ++++                 ++  +     +++++++ii qd+ g+n+gsf+ir+s ws +llD+w+dp+ +e+
       KHJ31225.1 259 SYSLQSHIF--NKLATVTYRDINEynplnithpfpakYLDEEDLSLIGDGKASSINLIIPQDCSGFNLGSFFIRRSSWSDRLLDIWWDPVGYEQ 350
                      *********..9*********98888999998754322222222333345778999************************************** PP

  Glyco_transf_34 174 kkavtesdeqsaleyllekhpevlskvglveqkvinsydegeke.........lgykegdlvvhfagCkvankca 239
                      k++ +e++eq++le+l++++p+v+ ++++++q++ins++ g+++         +++k++d+vv++agC+  ++c+
       KHJ31225.1 351 KHMEWEHKEQDVLEHLYQYQPWVRPHTAFIPQRMINSFPTGACSqagnnskihYDQKDRDFVVNMAGCEWGRDCW 425
                      *********************************************************************999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (465 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       631  (0.0351944); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.22s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3379.91
//
Query:       KHJ31226.1  [L=421]
Description: putative endo-beta-glucanase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-06   27.6   0.0      7e-06   25.6   0.0    2.1  2  Glyco_hydro_16  Glycosyl hydrolases family 16
  ------ inclusion threshold ------
      0.041   14.0   1.9      0.082   13.0   1.9    1.4  1  HC2             Histone H1-like nucleoprotein HC2


Domain annotation for each model (and alignments):
>> Glyco_hydro_16  Glycosyl hydrolases family 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   7.8e-10     7e-06      29      92 ..      92     157 ..      59     223 .. 0.84
   2 ?   -2.8   0.0       0.4   3.6e+03     123     142 ..     306     325 ..     303     333 .. 0.74

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 7.8e-10
                     EEEEEEEECCEESSEEEEEEEE..---STTEEEEEEEETGGTSTTEEEEE.EEETT-TTEEEEEEEB CS
  Glyco_hydro_16  29 esgsrikskksflyGkvearik..aaksaGvvtafylssedekahdEiDi.EflGndtgkvqtnvyg 92 
                     + + r++s+k++  G + a+i   ++ s Gv++a+++   d+++++EiDi E   n  ++ ++++++
      KHJ31226.1  92 RPAVRLESTKKYNQGLFIADIEhmPGGSCGVWPALWTFGPDWPNSGEIDIvEGA-NLDTTNSMTLHT 157
                     456799***************99899999*********99**********8865.333445555554 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.4
                     EEEEEETTEEEEEEESSHHH CS
  Glyco_hydro_16 123 kikfyVDgkpvrtltkkeae 142
                     + ++++++++v + +++ + 
      KHJ31226.1 306 QSHWLINNIKVFQASNSGSI 325
                     56899999999999988665 PP

>> HC2  Histone H1-like nucleoprotein HC2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   1.9   9.2e-06     0.082      57      99 ..     344     385 ..     323     391 .. 0.53

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 9.2e-06
         HC2  57 kkvaakkaaakkaavkkavakkvvakkkvakKavAKKaaakKv 99 
                 k +++ ka   ka+v ka  +k++ +k+++ Ka   Ka++ K+
  KHJ31226.1 344 KAPVE-KAPVEKAPVEKAPVEKAPVEKAPVEKAPVEKAPVEKT 385
                 33333.3444444555555555555555555555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2965.24
//
Query:       KHJ31227.1  [L=431]
Description: putative nudix family hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-08   32.8   0.0    1.4e-07   31.6   0.0    1.6  1  NUDIX     NUDIX domain


Domain annotation for each model (and alignments):
>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.0   7.7e-12   1.4e-07      15     113 ..      85     193 ..      71     205 .. 0.73

  Alignments for each domain:
  == domain 1  score: 31.6 bits;  conditional E-value: 7.7e-12
                 SEEEEEEESSSSTTT.E....ESSEEECBTTS.HHHHHHHHHHHHHHS..EEEEEEEEEEEEEEEEEEEEEEEEEEEEE..EEEEEEECSGCSST...S CS
       NUDIX  15 gevLlvrrskkpfpg.W....elPgGkvepgE.tpeeAArREleEEtG..leaellellgrlhylapydgpygdeheil..yvfleevegelepn...d 100
                  ev+ ++r+ ++  + W    +lPgGk +p + + +  A+RE++EE+G  l+ ++  ++g+l++ +  ++  + +   l  +vfl  ++ ++ p+   +
  KHJ31227.1  85 PEVIFIKRA-AREGDrWtshvALPGGKRDPEDnDDKSVAIRETAEEIGldLTSPDSIYIGKLPERLILTALGTVPILTLcpFVFL--WTKTVLPPlklQ 180
                 35999****.333334765546**********9***************4445566678888888888888888866666334444..444444444566 PP

                 TTTEEEEEEEEHH CS
       NUDIX 101 enevsevrwvple 113
                 ++ev+++ wvp+ 
  KHJ31227.1 181 PGEVASAHWVPIR 193
                 **********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       262  (0.0146132); expected 358.6 (0.02)
Passed bias filter:                      248  (0.0138323); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 3290.12
//
Query:       KHJ31228.1  [L=141]
Description: hypothetical protein EV44_g3356 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.22s 00:00:00.56 Elapsed: 00:00:00.35
# Mc/sec: 1195.20
//
Query:       KHJ31229.1  [L=348]
Description: hypothetical protein EV44_g3412 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0055   16.8   0.6      0.012   15.8   0.6    1.5  1  Ferredoxin_N  N-terminal region of 4Fe-4S ferredoxin iron-sul
  ------ inclusion threshold ------
       0.78    9.0   5.6        4.2    6.6   1.1    2.1  2  DUF4407       Domain of unknown function (DUF4407)
       0.94    9.7   8.7       0.82    9.9   5.6    2.2  2  Fib_alpha     Fibrinogen alpha/beta chain family
        1.3   10.1   7.7       0.21   12.6   2.5    2.3  2  Iwr1          Transcription factor Iwr1


Domain annotation for each model (and alignments):
>> Ferredoxin_N  N-terminal region of 4Fe-4S ferredoxin iron-sulfur binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.6   2.6e-06     0.012      35      61 ..      14      40 ..       9      42 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 2.6e-06
  Ferredoxin_N 35 vtkGeLseaeFhekYheaVlaEFgeDe 61
                  +  G L ++e  ekY ++V +EF+ D+
    KHJ31229.1 14 LPLGSLPQEEEEEKYEDEVKEEFDIDN 40
                  56799********************97 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   1.1   0.00094       4.2     157     231 ..      26     103 ..      20     114 .. 0.70
   2 ?    4.9   0.3    0.0032        15     116     164 ..     112     160 ..     105     186 .. 0.66

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.00094
     DUF4407 157 dalraeaqkeldgtkgtgttgvaGkgpaake.kkaqldaaqaelaelkakld..atarlaalraelaeleaerakera 231
                 ++ ++e+++e d + +tg++ v+G    +++  ka++ + +++l+++++ l+  ++a+++a r+ ++ ++a+ ++++ 
  KHJ31229.1  26 EKYEDEVKEEFDIDNTTGIKSVKGALVFMQQgLKAHAIKTDEKLNQFRNILRiqSNATTEAMREFKNLINAQNTESKG 103
                 455677777778777**************9988999999999999999988884555555555555555544444443 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0032
     DUF4407 116 qqeeakelkeqlaaaltaelaeleaqiaalqaeidaaearldalraeaq 164
                 ++ ++++lke  +++ ++ la+l a i++l+a+id++e ++    ++++
  KHJ31229.1 112 NHHDTEKLKEDNDSNQENYLAALSATIKRLEAKIDSLEITRPSGLNKVK 160
                 5555566666666667777777777777777777777766655555555 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   5.6   0.00018      0.82      23     122 ..      55     149 ..      53     158 .. 0.76
   2 ?   -0.1   0.0      0.21   9.5e+02      86     123 ..     212     248 ..     205     255 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00018
                 HHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCH.HHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  23 qdlllkyekdvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqe.snirvLqnvlesneqkiqk 120
                 q+ l+ +  +++++l++ +n l+  sn t+ea +  k++ +  + + k k+ n n +k+   +   + ++lke  d++  + + +L  +++++e ki  
  KHJ31229.1  55 QQGLKAHAIKTDEKLNQFRNILRIQSNATTEAMREFKNLINAQNTESKGKSRN-NSFKN---HH--DTEKLKEDNDSNQeNYLAALSATIKRLEAKIDS 147
                 666777788999******************99999999999888887777743.33322...22..344565555544439999999999999999999 PP

                 HH CS
   Fib_alpha 121 Le 122
                 Le
  KHJ31229.1 148 LE 149
                 98 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.21
                 HHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  86 leeeilrlketidaqesnirvLqnvlesneqkiqkLeq 123
                 ++ e lrl ++ ++++s +++L++   +n q++++++ 
  KHJ31229.1 212 VN-EELRLSKNATHKFSCMEELKDASADNWQRLHNIQR 248
                 55.66778888888889999999999999988888765 PP

>> Iwr1  Transcription factor Iwr1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.2      0.86   3.9e+03      31      42 ..      21      32 ..       5      42 .. 0.57
   2 ?   12.6   2.5   4.6e-05      0.21      34      67 ..     101     132 ..      64     133 .. 0.63

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.86
        Iwr1 31 ieeedeelldaf 42
                 eee+e++ d++
  KHJ31229.1 21 QEEEEEKYEDEV 32
                344444444333 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 4.6e-05
        Iwr1  34 edeelldafaeddedsdeeededdeDsNaEdnyr 67 
                 ++ +  ++ +++ +d +  + ++d+DsN+E++ +
  KHJ31229.1 101 SKGKSRNNSFKNHHDTE--KLKEDNDSNQENYLA 132
                 22223344444455544..669*********975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1402  (0.0781973); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2509.32
//
Query:       KHJ31230.1  [L=204]
Description: hypothetical protein EV44_g2414 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1600.84
//
Query:       KHJ31231.1  [L=94]
Description: hypothetical protein EV44_g2270 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 718.04
//
Query:       KHJ31232.1  [L=588]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        2.4    8.2  12.0        7.5    6.6   0.1    3.7  4  DUF1451   Zinc-ribbon containing domain


Domain annotation for each model (and alignments):
>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.1   0.00042       7.5      26      69 ..      44      88 ..      33     108 .. 0.78
   2 ?    1.2   0.0     0.019   3.3e+02      16      66 ..     261     309 ..     256     314 .. 0.85
   3 ?    1.2   5.8     0.019   3.4e+02     117     143 ..     340     366 ..     337     369 .. 0.93
   4 ?   -3.3   0.1      0.47   8.3e+03      32      59 ..     402     429 ..     397     441 .. 0.62

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.00042
     DUF1451 26 seaeeltkeelelvaeylkrDleeaarsleeske.eleewlsldl 69
                s +e ++kee e +++yl+  ++++a++ ++ ++ + +e+++ ++
  KHJ31232.1 44 SLTEGIEKEETESFKAYLRVAISNFAAAESAMEKeNEKEKEKETV 88
                4567899******************99988877744445555444 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.019
     DUF1451  16 elvekakeklseaeeltkeelelvaeylkrDleeaarsleeskeeleewls 66 
                   + k++ +++  + +  ee+e+v++ l   ++ ++r+ +e+ +  ++w  
  KHJ31232.1 261 SSIRKVQGQMEVSSAMLIEEVERVTSILPAHVKLFGRNKAETPH--RTWMA 309
                 67889999999999*************************99998..56765 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.019
     DUF1451 117 CekCgkelalkkteeippCpkCgateF 143
                 C++C+ ++  k+ +  p C +Cg+t+ 
  KHJ31232.1 340 CKRCNGHHPTKNCSSAPSCGNCGSTNH 366
                 ***********************9975 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 0.47
     DUF1451  32 tkeelelvaeylkrDleeaarsleeske 59 
                 tke+++ +++  +r+ +++ r+ +++++
  KHJ31232.1 402 TKEQMKTFRQVGEREYQAVLRAKAAEES 429
                 6777777777777777777777666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       963  (0.0537119); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 4354.14
//
Query:       KHJ31233.1  [L=139]
Description: putative avra10-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 1134.80
//
Query:       KHJ31234.1  [L=113]
Description: hypothetical protein EV44_g4983 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.15   11.9   0.0       0.18   11.6   0.0    1.1  1  Peptidase_M14  Zinc carboxypeptidase


Domain annotation for each model (and alignments):
>> Peptidase_M14  Zinc carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0     1e-05      0.18      18      76 ..      38      96 ..      31     106 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1e-05
                   EEEEEE-TTS-EEEEEEE-SSTTSTTST-CEEEEEE-SSTT-HHHHHHHHHHHHHHHHH CS
  Peptidase_M14 18 lvsiGkSvegRplkvlkisssateaeegkpvvlidggiHarEwigsalllylleqLlsa 76
                   lv++G++ e+R +  ++   +a e +e   v++i g + + +++++++  ++l+q++ +
     KHJ31234.1 38 LVKLGTTREKRLMIDITALRQAYERREIAEVIWIMGETNPADALTKHVGNKALQQIIDT 96
                   6899********99999999999********************************9964 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 843.79
//
Query:       KHJ31235.1  [L=313]
Description: putative mitochondrial deoxynucleotide carrier [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-69  229.5   6.3    2.1e-22   78.8   0.1    3.0  3  Mito_carr        Mitochondrial carrier protein
     0.0036   16.5   4.8          1    8.4   0.4    3.7  5  Serine_protease  Gammaproteobacterial serine protease


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.9   0.1   1.9e-25   1.7e-21       8      93 ..       8     103 ..       4     106 .. 0.93
   2 !   77.0   0.3   8.8e-26   7.9e-22       5      90 ..     115     197 ..     112     202 .. 0.94
   3 !   78.8   0.1   2.4e-26   2.1e-22       8      95 ..     211     304 ..     207     306 .. 0.96

  Alignments for each domain:
  == domain 1  score: 75.9 bits;  conditional E-value: 1.9e-25
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS..........HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   8 ellaGglagavatlvttPldvvKtrlqtqkksskksksaa..........ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                  ++aG+++g++a ++++Pldv+K+rlq+q +  ++s s++          +l++l+ki+k eG+++l++G++p+ l+++++sa++f++y ++   l
  KHJ31235.1   8 VVIAGAISGMTARFFIAPLDVIKIRLQLQTTPINSSLSRRspffspldtgALSTLRKILKYEGITALWKGNIPAGLMYISYSAIQFTTYRSTSLAL 103
                 689*****************************8888877789***********************************************9987666 PP

  == domain 2  score: 77.0 bits;  conditional E-value: 8.8e-26
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlk 90 
                 ++++++aG++aga+at++t+Pld+++trl +q++++ +     +++ +kkiyk+eG  g++rGl++ + +++p  ++ f++yet++
  KHJ31235.1 115 AAESFIAGACAGATATTATYPLDLLRTRLAAQGTEKIYFS---LAHSVKKIYKSEGSNGFFRGLGAGVGQIVPHMGIFFSVYETIR 197
                 6789*******************************87744...9***************************************997 PP

  == domain 3  score: 78.8 bits;  conditional E-value: 2.4e-26
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS......HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   8 ellaGglagavatlvttPldvvKtrlqtqkksskksksaa......ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 + laG+la ++a+++++P+d+++ rlq+q+ + +k  ++       i+++++ki+ +eG rglyrGl+++l+++ap+ a+  ++ye+  ++l+k
  KHJ31235.1 211 DALAGVLASIIAKTCVFPFDLIRKRLQVQGPTRSKYFYKDipnyqgIFQTFQKILMSEGPRGLYRGLTMSLFKSAPTGAIIIFTYEKALHMLMK 304
                 689*****************************99988887***************************************************998 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0   0.00032       2.8     177     218 ..       9      50 ..       3      64 .. 0.88
   2 !    8.4   0.4   0.00012         1     174     200 ..     116     142 ..     111     151 .. 0.84
   3 ?   -1.4   0.1      0.12     1e+03      38      55 ..     163     180 ..     143     183 .. 0.77
   4 ?   -1.4   0.0      0.11     1e+03     177     194 ..     212     229 ..     207     242 .. 0.62
   5 ?   -1.9   0.0      0.17   1.5e+03      45      67 ..     269     290 ..     257     302 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00032
  Serine_protease 177 llaGalsGviAtvlttifnsykDkkllaskvengrlltaspf 218
                      ++aGa+sG++A ++  ++   k +  l+++  n  l   spf
       KHJ31235.1   9 VIAGAISGMTARFFIAPLDVIKIRLQLQTTPINSSLSRRSPF 50 
                      78*****************99999999999888888887776 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00012
  Serine_protease 174 ynkllaGalsGviAtvlttifnsykDk 200
                       + ++aGa +G++At+ t+++ +++ +
       KHJ31235.1 116 AESFIAGACAGATATTATYPLDLLRTR 142
                      56799***************9988765 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.12
  Serine_protease  38 lpsaysgGlfralYrGfl 55 
                       +s+ s+G+fr+l +G++
       KHJ31235.1 163 YKSEGSNGFFRGLGAGVG 180
                      45666899****999976 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 0.11
  Serine_protease 177 llaGalsGviAtvlttif 194
                       laG+l+ +iA ++ ++f
       KHJ31235.1 212 ALAGVLASIIAKTCVFPF 229
                      355555555665555555 PP

  == domain 5  score: -1.9 bits;  conditional E-value: 0.17
  Serine_protease  45 GlfralYrGflayalagskrrav 67 
                      G  r+lYrG +   +++   +a+
       KHJ31235.1 269 G-PRGLYRGLTMSLFKSAPTGAI 290
                      5.599999999866666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       355  (0.0198003); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2438.38
//
Query:       KHJ31236.1  [L=455]
Description: hypothetical protein EV44_g3404 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.028   14.4   1.0      0.051   13.6   0.4    1.7  2  DUF3074     Protein of unknown function (DUF3074)
       0.29   11.2   2.2       0.95    9.6   0.3    2.4  2  YafO_toxin  Toxin YafO, type II toxin-antitoxin system


Domain annotation for each model (and alignments):
>> DUF3074  Protein of unknown function (DUF3074)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       0.5   4.5e+03     101     141 ..      41      80 ..      26      87 .. 0.66
   2 ?   13.6   0.4   5.7e-06     0.051       5     132 ..     229     375 ..     222     392 .. 0.65

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.5
     DUF3074 101 vvslpidehpeaaerkglvrgqYeSvErirelpkeseesde 141
                 ++++p+ +++  ++  +  + +Y  +E i+  pk+++++++
  KHJ31236.1  41 IINKPL-SSNLHPSVAHENENRYHPLESIQTFPKSNRQNSQ 80 
                 566666.3344455555556789999999988875554433 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 5.7e-06
     DUF3074   5 rSvh...eseggasfeefkkgLkkehaesekey..........vrsigaerrveew.....vevk...gsgklevvelsakfpgpltpRdFvvllltas 82 
                 +  h   ++e+g+ f+e+ + L+ +   s  +           ++si a      +       ++   + +++e   l a+  + lt+R+F++++ t+ 
  KHJ31236.1 229 NMFHknpSKEKGLVFNEMVQILRATQRGSCSDIpacssailqqTHSISA------LcnniyAALEyneTAIRTESSDLVAS--AYLTDRKFHEWIQTSR 319
                 5566666556788899999999887777766655554333333333333......22111111222113444444444444..34**********9999 PP

     DUF3074  83 seaeeeesease......kerefvvvslpidehpeaaerkglvrgqYeSvErirel 132
                 +++++++s++s+      +++ fv  ++ + +++++++++   r+++  v r   l
  KHJ31236.1 320 QNSSHNNSSHSNaltssnPKKCFVCRQVGCWSTNHSQQERTKARARFSKVVRAYVL 375
                 99999988888899999877789999999999888999998899988877665555 PP

>> YafO_toxin  Toxin YafO, type II toxin-antitoxin system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1     0.072   6.5e+02      23      54 ..      52      83 ..      39      85 .. 0.82
   2 ?    9.6   0.3   0.00011      0.95      15      60 ..     402     455 .]     396     455 .] 0.82

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.072
  YafO_toxin 23 prllasevrkiHlrdeeakfskkliqfkrtSd 54
                p++++++ ++ H  ++ ++f+k  +q +++S+
  KHJ31236.1 52 PSVAHENENRYHPLESIQTFPKSNRQNSQKSN 83
                556666667788889999************98 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00011
  YafO_toxin  15 rdaryeepprllasevrkiHlrdeeakfskkl........iqfkrtSdayLvYc 60 
                 +d +++++ +  + ++ k+  +d+e++f+            q ++tSd++Lv c
  KHJ31236.1 402 HDDQFTSDLNCFYTSISKVTAQDAENHFQVLAnqstyhtlTQDNKTSDHFLVSC 455
                 58899999999999999999998888887544455677779***********77 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (455 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       906  (0.0505327); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3246.49
//
Query:       KHJ31237.1  [L=110]
Description: hypothetical protein EV44_g4058 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 818.67
//
Query:       KHJ31238.1  [L=578]
Description: putative atp-dependent rna helicase dbp5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-34  117.6   0.1    1.1e-33  116.5   0.1    1.6  2  DEAD        DEAD/DEAH box helicase
    3.3e-23   82.1   0.1    8.9e-23   80.8   0.1    1.8  1  Helicase_C  Helicase conserved C-terminal domain
    0.00032   20.7   0.0    0.00063   19.8   0.0    1.5  1  ResIII      Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.039   13.7   0.0      0.069   12.9   0.0    1.3  1  AAA_30      AAA domain
      0.064   13.2   0.0       0.13   12.2   0.0    1.5  1  Flavi_DEAD  Flavivirus DEAD domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.5   0.1   3.1e-37   1.1e-33       2     173 ..     206     369 ..     205     372 .. 0.88
   2 ?   -2.7   0.0       1.2   4.4e+03      59     105 ..     433     479 ..     422     493 .. 0.65

  Alignments for each domain:
  == domain 1  score: 116.5 bits;  conditional E-value: 3.1e-37
                 HHHHHHHHHHHTT..CEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTST.SEEEEEET.TSSHHHHHHHHHT CS
                 xxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx.xxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgg..gdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyid.lrvlliig.gvaardqlskldn 96 
                 +iQ++a+pl+l++   +++++ + G+GKT+afli +l+++ +    + p+ali++P+reLa+q  n +kk+++++d l+v++ +   v+++  ++++  
  KHJ31238.1 206 RIQEKALPLLLKNppTNMIAQSQSGTGKTAAFLINILSRI-DYSFHKSPQALILAPSRELARQLENVIKKIGSFVDnLTVQAAVPgVVSRNTAVEAI-- 301
                 79*********77558*********************999.44789999*************************88789985555055555555666.. PP

                 TCSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHT.TTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  97 gvdivvgtpgrlddllstgklnlsqvrflVlDEadrlldq.gfsdfinrilnqlpqitcdgklqrqvivlSATlpkdv 173
                    +v+gtpg ++dll+++++n++++++l lDEad++ld+ g +d++ r+   l+      +l  q++++SAT+p+dv
  KHJ31238.1 302 ---VVIGTPGTVLDLLRRRQINTQKLKILCLDEADNMLDMqGLGDQCLRVKMMLN------SL-DQILLFSATFPDDV 369
                 ...*************************************9********888882......22.36*********887 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTT.CSEEEEEH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx RF
        DEAD  59 Laeqtlnnlkkfkkyidlrvlliiggvaardqlskldng.vdivvgtp 105
                  a  + ++l + ++++ ++v+  + g+++++ l++++ g ++++++t 
  KHJ31238.1 433 TADRISDRLISDGHQV-VSVHGAYDGHDRDRILQDFRLGkAKVLITTN 479
                 4444444444444432.4666677888888888888755588888775 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.8   0.1   2.5e-26   8.9e-23      13     111 .]     418     524 ..     407     524 .. 0.86

  Alignments for each domain:
  == domain 1  score: 80.8 bits;  conditional E-value: 2.5e-26
                 TTTTSEEEEEESSHHHHHH..HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS........SSHHHHH CS
  Helicase_C  13 eeeggkilifvntidrlek..vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp........rnvtsyi 101
                     g ++ifv++++++++   +l+  + g +v+ +hg     +r++il++f+ g+ +vLi+t+v++rGid+  v++Vin+d+p         + ++y 
  KHJ31238.1 418 LMTIGSSIIFVKRRETADRisDRLI--SDGHQVVSVHGAYDGHDRDRILQDFRLGKAKVLITTNVLARGIDVSTVSMVINYDIPmkgrfneiPDAETYL 514
                 4567899********9987645555..77*******************************************************98886555557**** PP

                 HHHTTSSSTT CS
  Helicase_C 102 qriGRtgRag 111
                 +riGRtgR+g
  KHJ31238.1 515 HRIGRTGRFG 524
                 ********86 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   1.8e-07   0.00063      20      84 ..     217     282 ..     196     367 .. 0.68

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 1.8e-07
                 ...TTSEEEEEESTTSTHHHHH.HHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG.... CS
      ResIII  20 kskrdkrglikmaTGtGKTlva.aklierllkkgkee.kflflvprkslleqtleefkkflseayke 84 
                 k +  ++++ +   GtGKT    +++  r+  +++++ ++l+l+p+++l  q+++ +kk+ s  ++ 
  KHJ31238.1 217 K-NPPTNMIAQSQSGTGKTAAFlINILSRIDYSFHKSpQALILAPSRELARQLENVIKKIGSFVDNL 282
                 4.777899999********9998999999999999888****************9999998876543 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.9e-05     0.069       6      98 ..     208     333 ..     204     347 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.9e-05
      AAA_30   6 QaaavealltsgdrvavltGpAGtGKtta..lkalreaweaa..ggrviglAptgkaAkvLaeelgieastiakllkrlk................... 81 
                 Q++a+  ll+++   ++++   GtGKt a  ++ l ++  +     + ++lAp+ + A++L++ +   +s +++l+ + +                   
  KHJ31238.1 208 QEKALPLLLKNPPTNMIAQSQSGTGKTAAflINILSRIDYSFhkSPQALILAPSRELARQLENVIKKIGSFVDNLTVQAAvpgvvsrntaveaivvigt 306
                 999999999999999************7532566655544332247999*************8766666666666655556666666667777777888 PP

      AAA_30  82 ........grarlepg..tllivDEag 98 
                         +r +++++  ++l  DEa 
  KHJ31238.1 307 pgtvldllRRRQINTQklKILCLDEAD 333
                 888888883344444334777788874 PP

>> Flavi_DEAD  Flavivirus DEAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   3.6e-05      0.13      10     105 ..     226     333 ..     219     373 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.6e-05
                 E--TTS-TTTTHHHHHHHH...HHHTT--EEEEESSHHHHHHHHHHTTT.......S-EEE-------------SEEEEEHHHHHHHHHH..T------ CS
  Flavi_DEAD  10 dlhPGaGktrkvlpelvke...aierrlrtlvLaPtrvvlaemeealkg.......levryktsavkeektgrelvdvmchatftkrlls..pvrkkny 96 
                 +   G+Gkt  +l +++ +   ++++  ++l+LaP r  ++ +e+ +k+       l+v+   + v +++t  e + v+     +  ll   ++++++ 
  KHJ31238.1 226 QSQSGTGKTAAFLINILSRidySFHKSPQALILAPSRELARQLENVIKKigsfvdnLTVQAAVPGVVSRNTAVEAIVVIGTPGTVLDLLRrrQINTQKL 324
                 5678*********999765222789999*********99888888877511111114555555555555555554444444444444444245566667 PP

                 SEEEEETTT CS
  Flavi_DEAD  97 eliimDeah 105
                 +++ +Dea 
  KHJ31238.1 325 KILCLDEAD 333
                 777778775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (578 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4048.84
//
Query:       KHJ31239.1  [L=446]
Description: hypothetical protein EV44_g0157 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   7.1e-137  455.8   1.3   8.8e-137  455.6   1.3    1.0  1  Glyco_hydro_72  Glucanosyltransferase
      2e-05   24.2   0.2    0.00015   21.3   0.2    2.2  1  Cellulase       Cellulase (glycosyl hydrolase family 5)


Domain annotation for each model (and alignments):
>> Glyco_hydro_72  Glucanosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  455.6   1.3  9.8e-141  8.8e-137       6     314 ..      29     330 ..      24     331 .. 0.98

  Alignments for each domain:
  == domain 1  score: 455.6 bits;  conditional E-value: 9.8e-141
                     STTS--EEEETTEEEETTT-BBE-EEEEE--BE------SSB-GGG-HHHHHHHHHHHHHHT-SEEEES---TTS--HHHHHHHHHTT-EEEEES CS
  Glyco_hydro_72   6 eeaveaieikgnkffdsksgeqfyikGvdyqpggseevsslvdpladaeaCkrdikllkelgvntvrvyavdnskdhdeCmkalsdagiyvildl 100
                     ++++++i++kgn+ff  + +++fyi+Gvdyqpggs   s+lvdplad  +Ckrdi+ +kelg+ntvr+y+vdn+++hd Cm+al++agiy++ld+
      KHJ31239.1  29 DSSITPITVKGNAFF--QGDKRFYIRGVDYQPGGS---SKLVDPLADEANCKRDIAKFKELGLNTVRIYTVDNTANHDVCMNALAAAGIYLVLDV 118
                     67899**********..899***************...8******************************************************** PP

                     -BTTBS--TTS-..---HHHHHHHHHHHHHHTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS----EEEEE---TTTHHHHH CS
  Glyco_hydro_72 101 nepkesinradpassynedllervfkvidafkeyknvlgffaGnevvndksntaasayvkavvrdvkeyikkkkerkiPvGysaaddaelrvela 195
                     n+pk s+nra+p+ syn+++l+++f++idaf+ y+n+l+ff+Gnev+nd ++t a++yvkav+rd+++yi ++ +rkiPvGysaad++++r e+a
      KHJ31239.1 119 NTPKYSLNRATPSPSYNAVYLQNIFATIDAFAGYPNTLAFFSGNEVINDDDTTPAAPYVKAVTRDMRQYIGSRGHRKIPVGYSAADVNSNRREMA 213
                     *********************************************************************************************** PP

                     HHTTBTT-..--S-EEEEE----SS--HHHHSHHHHHHHHTT-SS-EEEEEE---SSSS---THHHHHTSHHHHTTEEEEEES-SB--SSS--SE CS
  Glyco_hydro_72 196 eylaCgdeddkadffglnmyeWCgkssfktsGydertkefenysiPlflseyGCnkvtprkftevealyseemtsvfsGGlvyeyseeannyGlv 290
                     ey++Cg +d+++dff++n+y+WC+ s+f+t+G+d+++k+f++y++P+flse+GCn+++ r+f+e+ +lys++mtsv+sGGlvyeysee ++yGlv
      KHJ31239.1 214 EYMNCGTDDERSDFFAFNDYSWCDPSTFTTAGWDQKVKNFTGYGLPIFLSEFGCNTNK-RQFQEIISLYSKDMTSVYSGGLVYEYSEEGSKYGLV 307
                     ********************************************************98.************************************ PP

                     EE-TTS-EEE-THHHHHHHHHHH- CS
  Glyco_hydro_72 291 kiddddvkkllkdfenlkseykki 314
                     kid++ v+  + df +lks+++k+
      KHJ31239.1 308 KIDGNTVT-ETPDFLALKSAFSKT 330
                     ******99.99*********9986 PP

>> Cellulase  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.2   1.6e-08   0.00015      22     251 ..      73     271 ..      57     295 .. 0.69

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 1.6e-08
                 SHHHHHHHHHHHT-SEEEEEEECTGGTTSSTTTGCTHHHHHHHHHHHHHHHHTT-EEEEEEESSTTT.CSSSSTTTTHHHHHHHHHHHHHHHHHHHTTT CS
   Cellulase  22 ttkalidevkdagfntvRlpvswgelvenapdykvdenslerveevvkyakenglyvildiHseegw.ltkadgnssedtaeeffkklwtqiAerykkn 119
                 + k  i+++k+ g ntvR+ +  ++                + +  +++  ++g+y +ld+  + ++ l++a++++s+++   ++++ + +  + ++++
  KHJ31239.1  73 NCKRDIAKFKELGLNTVRIYTV-DNTA--------------NHDVCMNALAAAGIYLVLDVNTP-KYsLNRATPSPSYNA--VYLQN-IFATIDAFAGY 152
                 5566777888888888888776.4444..............4566899***************7.442444444444433..34444.333468999** PP

                 TTTEEEESSSS--STTCTCCTCHHHTTHHHHHHHHHHHHHHHHTTS...SEEEEECHH..HHTBHHHHHCT.SG..SSSSTTEEEEEEEETTTHHHTGC CS
   Cellulase 120 devvifelmNEPhgnntgaewtseeadevkayaeeaikaIRavgpn...rliivegns..wsgnldgavln.dP..ndsqdnliysvHfYgpsdfaqte 210
                 ++ ++f   NE    +++        +  + y+++++   R++ ++   r i v+      ++n ++ +++ +   +d +   ++++ +Y+  d     
  KHJ31239.1 153 PNTLAFFSGNEVINDDDT--------TPAAPYVKAVTRDMRQYIGSrghRKIPVGYSAadVNSNRRE-MAEyMNcgTDDERSDFFAFNDYSWCDP---- 238
                 *************96654........45566666666666665444455888888743224445555.3333225644589999******97773.... PP

                 GSHSCTHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSTTSS CS
   Cellulase 211 fgkdltdktnlaqrledaakylvekgipviigEfGgsnadg 251
                        +t ++  ++++ k+++  g+p++++EfG  n+++
  KHJ31239.1 239 -------STFTTAGWDQKVKNFTGYGLPIFLSEFGC-NTNK 271
                 .......345789**********************6.5555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       356  (0.0198561); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3138.96
//
Query:       KHJ31240.1  [L=417]
Description: hypothetical protein EV44_g0243 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.098   12.8   0.4        0.2   11.8   0.4    1.6  1  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.4   1.1e-05       0.2       2      14 ..     138     150 ..     137     151 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.1e-05
                 CTSSSSSSSSTTT CS
     zf-CCHC   2 kCynCGepGHiar 14 
                  Cy+C ++ H++ 
  KHJ31240.1 138 RCYTCKSEDHYSE 150
                 6**********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       591  (0.0329634); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2981.86
//
Query:       KHJ31241.1  [L=355]
Description: putative wd repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.4e-37  125.1   9.7    1.3e-06   29.1   0.0    7.5  7  WD40          WD domain, G-beta repeat
      2e-11   44.0   0.1      0.019   15.2   0.0    5.1  6  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
  ------ inclusion threshold ------
      0.012   14.1   0.3        0.1   11.1   0.1    2.2  3  Cytochrom_D1  Cytochrome D1 heme domain
      0.022   13.7   0.0        6.5    5.6   0.0    3.1  3  Ge1_WD40      WD40 region of Ge1, enhancer of mRNA-decapping 
      0.037   13.3   0.1        3.2    7.0   0.0    2.7  3  WD40_like     WD40-like domain
       0.08   12.9   0.0       0.19   11.7   0.0    1.7  1  DUF2415       Uncharacterised protein domain (DUF2415)


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.0   4.2e-10   1.3e-06       3      37 ..      55      90 ..      53      91 .. 0.91
   2 !   19.3   0.1   5.2e-07    0.0016       3      38 .]      98     134 ..      96     134 .. 0.90
   3 !   18.3   0.0     1e-06    0.0031       4      38 .]     141     177 ..     138     177 .. 0.82
   4 !   11.9   0.0   0.00011      0.34      11      38 .]     191     218 ..     182     218 .. 0.88
   5 !   23.5   0.0   2.4e-08     7e-05       5      38 .]     226     260 ..     222     260 .. 0.86
   6 !   13.6   0.1   3.2e-05     0.094      17      38 .]     289     310 ..     269     310 .. 0.84
   7 !    9.0   0.0   0.00088       2.6       1      34 [.     314     349 ..     314     351 .. 0.71

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 4.2e-10
                EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37
                ++  l+GH + v + +f+p+ga +asGs+D+t+++W
  KHJ31241.1 55 PVIQLSGHtGEVFCGKFDPNGANIASGSMDRTIMLW 90
                66789***777************************* PP

  == domain 2  score: 19.3 bits;  conditional E-value: 5.2e-07
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + +tltGH + + +l++s+d + l+s+s D ++  Wd
  KHJ31241.1  98 NYGTLTGHkGAILDLQWSRDARVLFSASADMHLASWD 134
                 5689****655**********************9998 PP

  == domain 3  score: 18.3 bits;  conditional E-value: 1e-06
                 EEEEESSSS.EEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40   4 lrtltGHss.vtslafspdgawl.asGsdDgtvriWd 38 
                 +r + GH+  v+s++ s+ g  l +s+sdDg + iWd
  KHJ31241.1 141 IRRYIGHDEiVNSMDISKRGEELlVSSSDDGYIGIWD 177
                 57799**4458****8888888626889********9 PP

  == domain 4  score: 11.9 bits;  conditional E-value: 0.00011
                 SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++vt++a    g+ + sG+ D+ +r+Wd
  KHJ31241.1 191 FPVTAVALAEAGNEIYSGGIDNDIRVWD 218
                 46999*99999999*************9 PP

  == domain 5  score: 23.5 bits;  conditional E-value: 2.4e-08
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++  GH + v+sl+ spd+++l+s s+D tvr Wd
  KHJ31241.1 226 YSMLGHtDTVSSLRISPDSQFLLSNSMDSTVRTWD 260
                 5556**666**************8899*******9 PP

  == domain 6  score: 13.6 bits;  conditional E-value: 3.2e-05
                 EEETTSSEEEEEETTSEEEEEE CS
        WD40  17 afspdgawlasGsdDgtvriWd 38 
                 ++s+dg+ +a+G  Dgt  iW+
  KHJ31241.1 289 SWSSDGKRVAAGAGDGTTVIWN 310
                 5***********55*******8 PP

  == domain 7  score: 9.0 bits;  conditional E-value: 0.00088
                 TEEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEE CS
        WD40   1 gqclrtltGH.ssvtsla..fspdgawlasGsdDgtv 34 
                 g+++++l GH ++v+ +a  ++++ + ++sGs D+++
  KHJ31241.1 314 GKLQYKLPGHkGCVN-FAelTPSSDPIIVSGSSDCSL 349
                 678999****55585.33476666666789*88*997 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.67     2e+03      36      64 ..      61      89 ..      54      95 .. 0.81
   2 !   10.6   0.0   0.00017      0.52      33      85 ..     101     152 ..      70     159 .. 0.74
   3 !    5.8   0.0    0.0055        16      38      79 ..     148     190 ..     144     199 .. 0.75
   4 !    6.0   0.0    0.0049        15      39      87 ..     191     238 ..     183     239 .. 0.86
   5 !    5.9   0.0    0.0051        15      27      66 ..     214     260 ..     196     263 .. 0.68
   6 !   15.2   0.0   6.5e-06     0.019      44      81 ..     288     325 ..     270     332 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.67
  ANAPC4_WD40 36 kedsevrsLaWkpdgklLavaysdgevrl 64
                 ++ +ev + ++ p+g  +a +  d ++ l
   KHJ31241.1 61 GHTGEVFCGKFDPNGANIASGSMDRTIML 89
                 56677888899999999999999988876 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00017
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavt 85 
                  + +++++ + +L+W+ d ++L  a +d ++   d ++g  ++ +  ++e  v+
   KHJ31241.1 101 TLTGHKGAILDLQWSRDARVLFSASADMHLASWDLSTGIRIRRYIGHDE-IVN 152
                  45789999**************************999988887755544.455 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0055
  ANAPC4_WD40  38 dsevrsLaWkpdgk.lLavaysdgevrlldaesgkvvhslsvk 79 
                  d+ v+s+  ++ g+ lL+ + +dg + + d+ +++ v+ ++++
   KHJ31241.1 148 DEIVNSMDISKRGEeLLVSSSDDGYIGIWDSRTKTAVSFIETE 190
                  666777777777651666777889**********999888776 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.0049
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                    v+++a  + g+ +  +  d+ +r+ d+ +++v+ s+  +++ +v++l
   KHJ31241.1 191 FPVTAVALAEAGNEIYSGGIDNDIRVWDMRKQEVIYSMLGHTD-TVSSL 238
                  5799999999*************************99976666.47665 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.0051
  ANAPC4_WD40  27 qrvwtl.......eedkedsevrsLaWkpdgklLavaysdgevrlld 66 
                   rvw++       +  ++  +v+sL+ +pd ++L     d++vr  d
   KHJ31241.1 214 IRVWDMrkqeviySMLGHTDTVSSLRISPDSQFLLSNSMDSTVRTWD 260
                  35555555555554567888899999999999999999999888776 PP

  == domain 6  score: 15.2 bits;  conditional E-value: 6.5e-06
  ANAPC4_WD40  44 LaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                   +W+ dgk  a +  dg+  + ++e+gk+  +l+ ++ 
   KHJ31241.1 288 ASWSSDGKRVAAGAGDGTTVIWNSETGKLQYKLPGHKG 325
                  58***************************999987776 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.1    0.0024       7.3      44     115 ..     115     187 ..     105     191 .. 0.56
   2 ?   11.1   0.1   3.3e-05       0.1       9      93 ..     165     249 ..     158     267 .. 0.85
   3 ?    5.0   0.0    0.0024       7.1      15     114 ..     212     319 ..     209     328 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0024
                   TT.SSEEEEEETTSEEEEEESSSSS.EEEEEE-SSEEEEEEE--TTSEEEEEEEETTEEEEEETTT--EEEEE CS
  Cytochrom_D1  44 asdgRyvyvigRDgkvtliDLwake.ivaevkiGlnarsvavSqddryvivgnYlPgqlvildaetLelvkvi 115
                   ++d R ++ ++ D ++   DL +   i + +       s+++S+ +  ++v++   g + i d++t   v  i
    KHJ31241.1 115 SRDARVLFSASADMHLASWDLSTGIrIRRYIGHDEIVNSMDISKRGEELLVSSSDDGYIGIWDSRTKTAVSFI 187
                   5666666666666666666665544233333333333456666666666666666666666666665555444 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 3.3e-05
                   EEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEEE.EEEE--TTSEEEE CS
  Cytochrom_D1   9 vverdagkvalldgdskeilavletgyalHisrvfasdgRyvyvigRDgkvtliDLwakeivaevkiGlnar.svavSqddryviv 93 
                   v  +d+g + + d+ +k+ ++ +et++ + +  +    g  +y  g D  + + D+ ++e++  +   +++  s+ +S d ++++ 
    KHJ31241.1 165 VSSSDDGYIGIWDSRTKTAVSFIETEFPVTAVALAEA-GNEIYSGGIDNDIRVWDMRKQEVIYSMLGHTDTVsSLRISPDSQFLLS 249
                   66789************************88777666.**********************77776666665426888888888765 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.0024
                   TEEEEEETTT-SEEEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEES..SSSS.....EEEEEE-SSEEEEEEE-..-TTSEEEEEEEETTEEE CS
  Cytochrom_D1  15 gkvalldgdskeilavletgyalHisrvfasdgRyvyvigRDgkvtliDL..wake.....ivaevkiGlnarsvavS..qddryvivgnYlPgqlv 102
                    ++++ d  ++e +  + ++ +   s   ++d  +++  + D++v   D+  +a +     +   v +G++   +  S   d++ v++g+   g+ v
    KHJ31241.1 212 NDIRVWDMRKQEVIYSMLGHTDTVSSLRISPDSQFLLSNSMDSTVRTWDIrpFAPTerllrVFDGVPLGIENNLIRASwsSDGKRVAAGAG-DGTTV 307
                   568889999999999999999999*************************94433324466577889999999888777669*******995.57888 PP

                   EEETTT--EEEE CS
  Cytochrom_D1 103 ildaetLelvkv 114
                   i ++et +l  +
    KHJ31241.1 308 IWNSETGKLQYK 319
                   888888776655 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0022       6.5     179     217 ..      54      93 ..      26     106 .. 0.88
   2 ?    1.4   0.0     0.041   1.2e+02     179     216 ..     223     261 ..     203     274 .. 0.79
   3 ?    2.4   0.0      0.02        61     189     212 ..     284     307 ..     275     313 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0022
    Ge1_WD40 179 egllkieehs.liveaafspdGtalatasedGevkffqvy 217
                   +++++ h+ ++ ++ f p+G+ +a  s+d ++ +++ +
  KHJ31241.1  54 APVIQLSGHTgEVFCGKFDPNGANIASGSMDRTIMLWRTF 93 
                 568999999889*********************9999866 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.041
    Ge1_WD40 179 egllkieehs.liveaafspdGtalatasedGevkffqv 216
                 e++  +  h+ ++++  +spd   l   s+d +v+ + +
  KHJ31241.1 223 EVIYSMLGHTdTVSSLRISPDSQFLLSNSMDSTVRTWDI 261
                 34444445554999999******************9998 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.02
    Ge1_WD40 189 liveaafspdGtalatasedGevk 212
                 +++ a++s+dG  +a+ + dG+  
  KHJ31241.1 284 NLIRASWSSDGKRVAAGAGDGTTV 307
                 6899*****************865 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.012        36     239     276 ..     153     190 ..     135     195 .. 0.79
   2 ?    7.0   0.0    0.0011       3.2       4      65 ..     194     256 ..     191     263 .. 0.83
   3 ?   -2.8   0.0         1     3e+03      10      51 ..     292     333 ..     289     351 .. 0.65

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.012
   WD40_like 239 iskikkisefvvafsTlcgkvgigDiRdketfkllesg 276
                    i k  e  ++ s  +g++gi D R k ++ ++e++
  KHJ31241.1 153 SMDISKRGEELLVSSSDDGYIGIWDSRTKTAVSFIETE 190
                 45566677777888888999999999999999999876 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0011
   WD40_like   4 YsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvkllddd.lilvvtlDGti 65 
                  ++ + + g+ i  Gg d+ ++v +++ +e+++++ + +d v   ++  d   +l  ++D t+
  KHJ31241.1 194 TAVALAEAGNEIYSGGIDNDIRVWDMRKQEVIYSMLGHTDTVSSLRISPDSqFLLSNSMDSTV 256
                 5788889999********************************998887776244556777766 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1
   WD40_like  10 kkgslilyGgkddkctvlkleslesvsivesfedSvifvkll 51 
                  +g+ ++ G+ d +  + + e++++ + + + +  v f++l 
  KHJ31241.1 292 SDGKRVAAGAGDGTTVIWNSETGKLQYKLPGHKGCVNFAELT 333
                 667777788888888888888887777777777777776665 PP

>> DUF2415  Uncharacterised protein domain (DUF2415)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   6.4e-05      0.19       6      36 ..     154     182 ..     151     187 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 6.4e-05
     DUF2415   6 ckFSpesglnDLLvisEhvgrvHlvDlRtgl 36 
                 + +S  +  ++LLv s + g++++ D Rt +
  KHJ31241.1 154 MDIS--KRGEELLVSSSDDGYIGIWDSRTKT 182
                 6678..5558******************755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       249  (0.0138881); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2570.23
//
Query:       KHJ31242.1  [L=135]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.13   12.7   0.1        0.2   12.1   0.1    1.3  1  GP68      Phage protein Gp68


Domain annotation for each model (and alignments):
>> GP68  Phage protein Gp68
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   1.1e-05       0.2      20      65 ..      55     100 ..      45     107 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.1e-05
        GP68  20 agvlrmrraGykGaailkllklrGtrlvnqmqraldaetaaaraGr 65 
                  ++ r  r+    ++ lk  +  G r  n +qra  ae++aa + r
  KHJ31242.1  55 RCLARPTRSSASTKEQLKTYRRMGKREYNVVQRARAAEEKAASSDR 100
                 58889999999999***************************98877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       867  (0.0483574); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1084.99
//
Query:       KHJ31243.1  [L=380]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.20s 00:00:00.66 Elapsed: 00:00:00.36
# Mc/sec: 3159.97
//
Query:       KHJ31244.1  [L=691]
Description: putative fha domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-10   39.6   0.0    1.5e-09   38.1   0.0    1.9  1  FHA       FHA domain


Domain annotation for each model (and alignments):
>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.0   8.3e-14   1.5e-09       2      69 .]      34     111 ..      33     111 .. 0.83

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 8.3e-14
                 EEESS..........TTSSEETTSTTSTTTEEEEEEETTCEEEEEEEESSSSSEEETTEEESTTSEEEE-TTEEEEET CS
         FHA   2 tiGRs..........sdcdivlddpsiSrkHalikfdkgsgkvyleDlgSknGtfvNgqrigkgepveLksgdvielG 69 
                 t+GR+          +  +  +d+p++Sr Ha+i+ d++  ++ l+D+gS +Gt +N++++ +  p+ L +gdv+ +G
  KHJ31244.1  34 TVGRAskssskslfsAGDNAWFDSPVMSRDHAEISLDSKCETLLLRDVGSMHGTSINNSQLVSYVPTSLCNGDVVIFG 111
                 789997744333333333444569***************99*****************999999***********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (691 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       740  (0.0412739); expected 358.6 (0.02)
Passed bias filter:                      261  (0.0145574); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.37
# Mc/sec: 5574.17
//
Query:       KHJ31245.1  [L=434]
Description: putative ifrd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-69  234.8   5.5    1.6e-69  234.4   5.5    1.1  1  IFRD      Interferon-related developmental regulator (IFRD)
     0.0071   16.5   0.1         16    6.1   0.0    3.7  3  HEAT      HEAT repeat


Domain annotation for each model (and alignments):
>> IFRD  Interferon-related developmental regulator (IFRD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  234.4   5.5   1.7e-73   1.6e-69      20     306 .]      58     360 ..      42     360 .. 0.91

  Alignments for each domain:
  == domain 1  score: 234.4 bits;  conditional E-value: 1.7e-73
        IFRD  20 asv..eeg.eed.eeeaqedweekLkqaidelt...eksaktReaaLesllellsshyleefveerlatlldalekslkkgkse.EqalAlkalallci 110
                 ++v  ++  + d   +++++w  ++++ ++e+    ++s+k+Re+aL+ + ++l+ hy+ e+++ +  ++ +al+ks+k ++se E++ Al a++l++i
  KHJ31245.1  58 TEVavNDRkSLDsSVKNSDSWILEIEDLLEEIKekkRSSTKGREKALSRYANILMNHYAFEQIAGKSREIFPALLKSIKGENSEkEASNALLAMTLTVI 156
                 333333334455578889999999999999999999*************************************************************** PP

        IFRD 111 tlgagdeseeileelkpvLkriikdssvslsakaaaieaLglltfvggadeeeieelmeflleifssdgqsieaadsaskalvtaalsawglLltllps 209
                 t     + e  ++++++ Lkr++k+s+  + +ka ai++L++++ ++ga+e ei e+++ l ei++sdg+si+a ds +  +v+aa++awg ++t+l  
  KHJ31245.1 157 T----VPLEVNYDSVEQELKRAYKNSK-LNHVKAFAIQCLSVIAPYAGASEFEIDEILDELIEIVESDGNSIDAPDSVE--VVVAACEAWGHMATYL-- 246
                 *....9999******************.99*************************************************..****************.. PP

        IFRD 210 sklnkkleedleealealvelLdssdvevriAAGeaiALlfElsreedeefeeeeee......................dteelleqlreLatdssKkr 286
                     ++le+++e a+ea++e+L+ssd++v+iAAGe+iALl+E s +e +e e+  ++                      ++e+ll  l+ L ++ssK++
  KHJ31245.1 247 ----DDLENKTEIAMEAFMEQLNSSDTNVQIAAGENIALLYESSFTE-REVEDGPASkiydnegfildssqvkryevfpQKEQLLYILNGLKNESSKQI 340
                 ....5555555779******************************999.7777677779***************************************** PP

        IFRD 287 aKkDrkkqRsvFrdvlttiE 306
                 aK+Drk+++s+F+d+++tiE
  KHJ31245.1 341 AKRDRKNLHSSFSDIINTIE 360
                 *******************9 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.016   1.5e+02      15      30 ..     182     197 ..     174     198 .. 0.86
   2 ?    2.7   0.0     0.022   1.9e+02      13      30 ..     228     245 ..     217     246 .. 0.86
   3 !    6.1   0.0    0.0018        16       2      29 ..     257     284 ..     256     286 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.016
                 HHHHHHHHHHHHHHHC CS
        HEAT  15 eVReaAakaLgalaev 30 
                 +V + A+++L  +a++
  KHJ31245.1 182 HVKAFAIQCLSVIAPY 197
                 7999*********986 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.022
                 SHHHHHHHHHHHHHHHHC CS
        HEAT  13 speVReaAakaLgalaev 30 
                 s eV  aA++a g++a +
  KHJ31245.1 228 SVEVVVAACEAWGHMATY 245
                 668999********9976 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.0018
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalae 29 
                 + ++++ l++++ +V  aA ++++ l+e
  KHJ31245.1 257 MEAFMEQLNSSDTNVQIAAGENIALLYE 284
                 77899****************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       744  (0.041497); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.22s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2991.20
//
Query:       KHJ31246.1  [L=294]
Description: hypothetical protein EV44_g0287 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00088   19.0   0.0     0.0016   18.1   0.0    1.4  1  RVT_2            Reverse transcriptase (RNA-dependent DNA pol
  ------ inclusion threshold ------
       0.15   10.9   0.0       0.18   10.6   0.0    1.1  1  Chondroitinas_B  Chondroitinase B


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   1.8e-07    0.0016      64     126 ..       4      70 ..       1      76 [. 0.79

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 1.8e-07
       RVT_2  64 rLllalaa....eeelvvhqldvdsafLnae..ldeevyvkqPpGfeidreeekvykLnkslyGlkqap 126
                 rL+lal+a    ++ l ++  d++ a++++   l+ + +vk+P+  ++d  e+ + ++ k lyG+  a+
  KHJ31246.1   4 RLILALTAilqeKKSLNLYVRDISQAYVQSSthLNRDFFVKPPTELQMD--EGSILRIVKPLYGIPEAG 70 
                 77777766222134577999********985226777*******99999..9*************9987 PP

>> Chondroitinas_B  Chondroitinase B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0     2e-05      0.18     303     379 ..     130     206 ..     101     248 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 2e-05
                      -BSEEEES-EEES-S.......SEEEEHHHHHHHCT---B---SEEEES-EEE--SS----SEE-TT..--TTSSEE CS
  Chondroitinas_B 303 vtdvviaynsfidvksplqfsvGsnidkkevlpaseirsarperiivannliykdkekkkpivaydkvdgvkfknnl 379
                       td+  a+n    ++  +  ++  + +k++++  s ++ +r +r i+a  l + ++   + iv + +++ +  knnl
       KHJ31246.1 130 FTDASFANNRDLSSQIGFVITLADDSNKANIIHWSSLKCKRVTRSILASELYAVAHGFDTAIVLKSTIEKILQKNNL 206
                      578888888888888888888889999**************************9999999999999**********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       519  (0.0289475); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 2014.27
//
Query:       KHJ31247.1  [L=287]
Description: hypothetical protein EV44_g6482 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.029   14.6  14.1        1.9    8.7   0.9    3.5  3  Pentapeptide_4  Pentapeptide repeats (9 copies)


Domain annotation for each model (and alignments):
>> Pentapeptide_4  Pentapeptide repeats (9 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.9    0.0001       1.9      15      64 ..      41      93 ..      29     107 .. 0.70
   2 ?    4.3   3.7    0.0025        44      13      50 ..      55      94 ..      50     151 .. 0.64
   3 ?    8.0   6.8   0.00018       3.2      10      65 ..     152     210 ..     106     221 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0001
  Pentapeptide_4 15 nvnFsea.rlrdcnFtecrl.snvnFdecnlsdvdfaev.dlkrasFsgcnlk 64
                    + nF ++ ++++ nF++ ++ +n nF + n+++ +f ++ ++ + +F++ n+ 
      KHJ31247.1 41 GGNFPNNgNIINGNFQNGNFpNNGNFPNGNFQNGNFPNNgNFPNGNFQNGNFP 93
                    55665555788888888888888888888888888854325666666666554 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.0025
  Pentapeptide_4 13 lsnvnFsea.rlrdcnFtecrl.snvnFdecnlsdvdfae 50
                    + n nF ++ ++ + nF++ ++ +n nF + n+++ +f +
      KHJ31247.1 55 FQNGNFPNNgNFPNGNFQNGNFpNNGNFPNGNFQNGNFPN 94
                    4444444444444444444444444444444444444433 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.00018
  Pentapeptide_4  10 ncklsnvnFsearlrdcnFtecrl.......snvnFdecnlsdvdfaevdl.krasFsgcnlkn 65 
                     n      nF + ++++ nF++ ++       +n nF + n+++ +f++ ++ ++ +F + n++n
      KHJ31247.1 152 N-----GNFPNGNFQNGNFQNGNFpnngnfpNNGNFPNGNFQNGNFQNGNFpNNGNFPNGNFQN 210
                     2.....3444445555555555555444457777777777777777776663445777777664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      240  (0.0133861); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2148.59
//
Query:       KHJ31248.1  [L=610]
Description: hypothetical protein EV44_g3121 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00029   20.6   4.0    0.00031   20.5   2.0    2.1  2  gag_pre-integrs  GAG-pre-integrase domain
  ------ inclusion threshold ------
      0.044   14.0   0.1       0.11   12.8   0.1    1.6  1  Phage_CII        Bacteriophage CII protein


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.36   3.2e+03      29      34 ..     104     109 ..     104     123 .. 0.83
   2 !   20.5   2.0   3.5e-08   0.00031      25      64 ..     138     181 ..     112     184 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.36
  gag_pre-integrs  29 rRLGHp 34 
                      rR+GHp
       KHJ31248.1 104 RRFGHP 109
                      7****9 PP

  == domain 2  score: 20.5 bits;  conditional E-value: 3.5e-08
  gag_pre-integrs  25 nlWHrRLGHpsfsrlkkLfkkgl...lpglkisk.sevCeaCql 64 
                      ++  +R+GHps +rl+++ +++    +++++i+k  ++C++Cql
       KHJ31248.1 138 RRLRKRFGHPSINRLRHILERSGhtdFDKNTIEKiRKFCHHCQL 181
                      55679**************8544366788888886679*****8 PP

>> Phage_CII  Bacteriophage CII protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   1.2e-05      0.11       7      38 ..     365     396 ..     360     401 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.2e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTT CS
   Phage_CII   7 rkeadriesdlLnkiailgqrkvaeaiGvdes 38 
                  k+a +i+s++   i+++++rkvaeaiG  +s
  KHJ31248.1 365 TKRASAIKSAMDEVISLRTKRKVAEAIGQRNS 396
                 57899***********************8876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (610 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 4321.33
//
Query:       KHJ31249.1  [L=214]
Description: hypothetical protein EV44_g3264 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1573.01
//
Query:       KHJ31250.1  [L=198]
Description: hypothetical protein EV44_g3995 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.036   14.7   1.4      0.063   13.9   1.4    1.3  1  Pex14_N   Peroxisomal membrane anchor protein (Pex14p) conser


Domain annotation for each model (and alignments):
>> Pex14_N  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   1.4   3.5e-06     0.063      57     148 ..      62     150 ..      33     154 .. 0.53

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.5e-06
     Pex14_N  57 vaassaseqaqeesasssatpqpqaasqtsqsspsps.ppaqqqqqqy...rpPivtypefltkppkppppPlrtwrdllitatalaglgaglygl 148
                 +++s++      +++s+++t+  +a++ +++ s++++ + ++q +q+    rpPi++ p  l +++  p  P+ + r l+ +  + + l+++ly++
  KHJ31250.1  62 INPSAT------TPQSKNKTQIDSAPKIHTSYSKATKnKIQEQGPQPRlasRPPITQ-PLRLSHNKTLPRKPQEDNRILVRLSLGHTCLSMSLYAI 150
                 222222......222222222222222222222222212233333333664666655.77888888888999999888888888888888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       851  (0.047465); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1542.54
//
Query:       KHJ31251.1  [L=694]
Description: putative cyclohexanone -monooxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-09   36.2   0.0    4.8e-09   35.2   0.0    1.4  1  FMO-like       Flavin-binding monooxygenase-like
    2.8e-05   24.3   0.0    9.4e-05   22.6   0.0    1.9  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain
    0.00027   20.3   0.1        0.4    9.9   0.0    2.2  2  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
     0.0013   18.1   0.0      0.012   14.9   0.0    2.1  2  Thi4           Thi4 family
     0.0021   17.2   0.0      0.045   12.9   0.0    2.3  2  K_oxygenase    L-lysine 6-monooxygenase (NADPH-requiring)
  ------ inclusion threshold ------
      0.076   13.1   0.0        5.5    7.1   0.0    2.3  2  Shikimate_DH   Shikimate / quinate 5-dehydrogenase


Domain annotation for each model (and alignments):
>> FMO-like  Flavin-binding monooxygenase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.0   1.6e-12   4.8e-09       4     199 ..      92     302 ..      90     329 .. 0.72

  Alignments for each domain:
  == domain 1  score: 35.2 bits;  conditional E-value: 1.6e-12
    FMO-like   4 vaviGaGvsGlasikccleeglep...tcfersddiGGlwrfkenvee..Grasiyksvvsnsskemscfsd..fplpedypnflhnsklleylklfak 95 
                 v +iGaG sG+a i   l e+l+      fer   iGG w  +  +      a+iy      s+ e +  +     +  +     ++ ++++ ++l ++
  KHJ31251.1  92 VVIIGAGESGIA-IGRRLREELNFdqfRIFERQSGIGGSWWINRYPGAacSNAAIYNIYTFCSCIESASIPPaaSDILGNLYKICEKCRIVDKIQLNTD 189
                 789*******87.56667777764222689**********99887654115788999888888888777653113344555566788899999998877 PP

    FMO-like  96 efdll..kyiqf..kttvcsvkkrpdfstsGqwevvtekegkk....esavfdavmvct.GhhvnphlplesfpGiekfkGqyfhsrdykepevfkgkr 185
                   + l     q    t    +++  d s+s + ++v  +        e  +   ++v t G+ ++p+  l   pG e+f+G++fhs  +++   +++k 
  KHJ31251.1 190 VRKCLwlESEQVweLTLWHIINRAGDLSESDRVKMVQSHGHESvyslEEKIRVKILVNTvGFIIEPNQFLAEVPGRENFQGEIFHSIRWQHNVDLTDKE 288
                 665541144443114566678999**********99988665422224455555666544*************************************** PP

    FMO-like 186 vlviGlGnsggdia 199
                 v+v+G G s++   
  KHJ31251.1 289 VIVVGTGSSATRFV 302
                 *********99765 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   3.1e-08   9.4e-05       1      45 [.      94     140 ..      94     151 .. 0.89

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 3.1e-08
                    EE--SHHHHHHHHHHHCC.TE.EEEEE-SSSSSSGGG-EECETTCEE CS
  NAD_binding_8   1 IvGaGlsGlvaAylLaka.gf.dvlllekrdrlGGraasyevpgvrv 45 
                    I+GaG sG ++ ++L+++ +f +  ++e+++++GG +  +++pg ++
     KHJ31251.1  94 IIGAGESGIAIGRRLREElNFdQFRIFERQSGIGGSWWINRYPGAAC 140
                    9****************99**66*************99998888655 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.1   0.00043       1.3       1      35 [.      93     129 ..      93     138 .. 0.82
   2 !    9.9   0.0   0.00013       0.4     103     183 ..     221     305 ..     215     338 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00043
  Pyr_redox_3   1 iIiGaGPaGlaaaielkk.agledylilEkg.nigns 35 
                  +IiGaG  G+a++  l++ ++++++ i E++  ig s
   KHJ31251.1  93 VIIGAGESGIAIGRRLREeLNFDQFRIFERQsGIGGS 129
                  7**************9852799*******99667766 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00013
  Pyr_redox_3 103 eVesvkkedegfevetsketyeAkkviiAtGefdkPnk..lnipGeek...lvkhyskvkefhkyagqkvvViGgknSavDaAlel 183
                  +V+ v+++ ++ +v + +e+++ k ++   G+   Pn+   ++pG e+      h+   ++  ++++++v+V+G + Sa      l
   KHJ31251.1 221 RVKMVQSH-GHESVYSLEEKIRVKILVNTVGFIIEPNQflAEVPGRENfqgEIFHSIRWQHNVDLTDKEVIVVGTGSSATRFVPIL 305
                  56666555.578899999999999************9633799**997523344666667777899************98655544 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0     4e-06     0.012      15      59 ..      87     132 ..      78     135 .. 0.87
   2 ?    0.3   0.0      0.11   3.3e+02      12      29 ..     281     298 ..     274     306 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 4e-06
                 HTEEEEEEE--SHHHHHHHHHHHHCTTS.-EEEEESSSS--TTTTT CS
        Thi4  15 yaesDvvivGaGssGLtaayylakkpdl.kvailersvspGGGawl 59 
                 y    vvi+GaG sG++ ++ l ++ ++ +  i+er+  +GG  w 
  KHJ31251.1  87 YTYYPVVIIGAGESGIAIGRRLREELNFdQFRIFERQSGIGGSWWI 132
                 556679*******************7774678*********99995 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.11
                 HHHHTEEEEEEE--SHHH CS
        Thi4  12 llkyaesDvvivGaGssG 29 
                  +++ + +v++vG+Gss 
  KHJ31251.1 281 NVDLTDKEVIVVGTGSSA 298
                 57888999********85 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.036   1.1e+02     193     224 ..      91     122 ..      71     129 .. 0.72
   2 !   12.9   0.0   1.5e-05     0.045     172     226 ..     269     321 ..     215     336 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.036
  K_oxygenase 193 riaVvGsGqSaaeifedllrrqkkvelklvtr 224
                   ++++G+G S+  i + l ++ +  + +++ r
   KHJ31251.1  91 PVVIIGAGESGIAIGRRLREELNFDQFRIFER 122
                  57888888888888877777755555555544 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 1.5e-05
  K_oxygenase 172 kervvHsseylerkeellakkriaVvGsGqSaaeifedllrrqkkvelklvtrse 226
                  + +++Hs +  ++   +l+ k+++VvG G Sa   +  l+++  + +++ ++rs+
   KHJ31251.1 269 QGEIFHSIRWQHNV--DLTDKEVIVVGTGSSATRFVPILIDEHGARSVTQLIRSP 321
                  4789******9999..799***********************9999999999986 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.024        70      14      44 ..      91     122 ..      82     125 .. 0.83
   2 ?    7.1   0.0    0.0018       5.5       9      42 ..     283     317 ..     277     336 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.024
                   EEEEES-SHHHHHHHHHHHCC.T-CEEEEEES CS
  Shikimate_DH  14 kvlliGaGemaelvakhLlak.gvkkvvvaNR 44 
                    v++iGaGe +  + + L ++ ++++  ++ R
    KHJ31251.1  91 PVVIIGAGESGIAIGRRLREElNFDQFRIFER 122
                   599********999999998877777777777 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0018
                   ..TT-EEEEES-SHHHHHHHHHHHCC.T-CEEEEE CS
  Shikimate_DH   9 slkekkvlliGaGemaelvakhLlak.gvkkvvva 42 
                   +l++k+v+++G+G  a++ +  L+++ g+++v+ +
    KHJ31251.1 283 DLTDKEVIVVGTGSSATRFVPILIDEhGARSVTQL 317
                   699********************976578877755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (694 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.24s 00:00:00.84 Elapsed: 00:00:00.39
# Mc/sec: 5338.63
//
Query:       KHJ31252.1  [L=331]
Description: putative casein kinase ii subunit beta-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-71  239.8   0.0    2.7e-71  239.2   0.0    1.3  1  CK_II_beta  Casein kinase II regulatory subunit
  ------ inclusion threshold ------
      0.054   13.7   0.0       0.13   12.5   0.0    1.5  1  IBR         IBR domain, a half RING-finger domain
       0.17   12.6   0.0       0.49   11.1   0.0    1.7  1  FAR1        FAR1 DNA-binding domain
       0.39    9.0   2.6       0.53    8.5   2.6    1.1  1  CDC45       CDC45-like protein


Domain annotation for each model (and alignments):
>> CK_II_beta  Casein kinase II regulatory subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.2   0.0     6e-75   2.7e-71       1     182 []      10     253 ..      10     253 .. 0.93

  Alignments for each domain:
  == domain 1  score: 239.2 bits;  conditional E-value: 6e-75
  CK_II_beta   1 sWiswflslkgneyfvevdedfiedkfnltgLseevpnykealelildv...............................eeeeeleeseksevessae 68 
                 sWis+f+ l+g+eyf+e++e+fi d+fnltgL+++v +ykeale+ild                                e+++++  s+ s+ve  ae
  KHJ31252.1  10 SWISSFCALTGHEYFAEISEEFILDDFNLTGLQTQVGMYKEALEMILDIepeeedddddeeeedegsvdvdgrtnrrsgtERRHSRVGSDLSTVELCAE 108
                 7******************************************************************************98899999************ PP

  CK_II_beta  69 lLYgliHaryiltkkglakmlekykkkefgrCprvlCekqkvLPvGlsdkpgektvklyCpkCedvYspkssrsrsidGafFGttfphlllltypelep 167
                 lLYgliH+r++++++g+++mleky++++fg Cpr++C++ ++LP+Glsd+pge+tvkl+Cp+C dvY p+ssr +++dGafFG+tf+ l++lt+pe++ 
  KHJ31252.1 109 LLYGLIHQRFVCSRTGIQQMLEKYETAQFGYCPRTNCDGIRTLPIGLSDVPGEDTVKLFCPSCLDVYVPPSSRYQTVDGAFFGRTFAALFMLTFPEIDL 207
                 ************************************************************************************************995 PP

  CK_II_beta 168 kksk...............................ekyepriyGfk 182
                 +k+                                ++y+p+i+Gfk
  KHJ31252.1 208 TKKVsdplsgshegdtnekingmnasnlapglgegKIYQPKIFGFK 253
                 44445566666666666666777777777777777**********8 PP

>> IBR  IBR domain, a half RING-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.8e-05      0.13       9      44 ..     130     171 ..     123     175 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.8e-05
         IBR   9 kkslesdpnlkwCprpdCeaiieksegcks........vtCskC 44 
                 +k+  ++ ++ +Cpr +C++i     g ++        + C++C
  KHJ31252.1 130 EKY--ETAQFGYCPRTNCDGIRTLPIGLSDvpgedtvkLFCPSC 171
                 343..356799********9997766644423334433558888 PP

>> FAR1  FAR1 DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00011      0.49      28      63 ..     113     147 ..     105     152 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00011
        FAR1  28 iirrkfvCskeGfkkekkktkeakrerastrtgCkA 63 
                 +i+++fvCs++G++++ +k  e+++     rt+C++
  KHJ31252.1 113 LIHQRFVCSRTGIQQMLEKY-ETAQFGYCPRTNCDG 147
                 57899**************9.888888999999986 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   2.6   0.00012      0.53     105     172 ..      31      93 ..      21     105 .. 0.53

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00012
       CDC45 105 vvfDDgdieeeleeereayealeeeeesdeedeeeeeeddddeeeeeeeeedeedeeedeeeskkkrk 172
                 +++DD ++ + l+++   y++  e+  + e + ee+++dd++ee+e + + d+    ++ ++ +++r+
  KHJ31252.1  31 FILDDFNL-TGLQTQVGMYKEALEMILDIEPE-EEDDDDDEEEEDEGSVDVDG---RTNRRSGTERRH 93 
                 57888885.78888888888888877664222.22222222222222222222...222222233332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       689  (0.0384294); expected 358.6 (0.02)
Passed bias filter:                      578  (0.0322383); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 2645.71
//
Query:       KHJ31253.1  [L=312]
Description: hypothetical protein EV44_g4820 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-23   83.6   0.0    2.9e-23   82.9   0.0    1.3  1  Cupin_8   Cupin-like domain
     0.0015   18.2   0.0     0.0034   17.1   0.0    1.5  1  Cupin_2   Cupin domain


Domain annotation for each model (and alignments):
>> Cupin_8  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.9   0.0   3.3e-27   2.9e-23      96     249 ..     145     312 .]     116     312 .] 0.77

  Alignments for each domain:
  == domain 1  score: 82.9 bits;  conditional E-value: 3.3e-27
     Cupin_8  96 epyaylqnanlasefpelkedsdlp.fateafgkkpeavnlWlGnsasvsslHkDhyeNlycvvrGrKkftLfpPsdapflyeaslsptedgtvvssvd 193
                 ++ +y+++a+l++   +l++d+ +p    +a  +   ++n+W+G + + + lH+D+  Nl++++ G Kk++Lf P+ + ++  + +++         v 
  KHJ31253.1 145 IKGLYIAQAPLTDLPSQLQHDFPTPrIVAKAGRGDIYNANIWIGYPPTYTPLHRDPNPNLFIQLIGIKKVRLFKPDIGLRIFQKVQRNI------GEVE 237
                 5689999**************998866667888889******************************************99977752221......1111 PP

     Cupin_8 194 ve...............epdle.kfprlkdakkalevtlnaGevLylPalWfHeVksla...eeplhlavnywyd 249
                  +               e+++    p++ +    +ev +++G+ L++P++W+H +k l+   +++++++vn+w++
  KHJ31253.1 238 HNgvirgremmegaerkELEKIiWGPSVDYSLDGMEVIVKSGDSLFIPKGWWHSIKGLQdadPKGINASVNWWFR 312
                 111112222223333223333213366777799************************99999999********96 PP

>> Cupin_2  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   3.8e-07    0.0034      31      58 ..     266     293 ..     262     300 .. 0.88

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 3.8e-07
                 EEEECTEEEEEETTEEEEE-TT-EEEEE CS
     Cupin_2  31 eltvdgeeveleaGdsvyfpagtpHrfr 58 
                  + +dg ev+++ Gds+++p+g +H ++
  KHJ31253.1 266 DYSLDGMEVIVKSGDSLFIPKGWWHSIK 293
                 6789*********************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       318  (0.0177366); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.20s 00:00:00.62 Elapsed: 00:00:00.35
# Mc/sec: 2650.72
//
Query:       KHJ31254.1  [L=259]
Description: hypothetical protein EV44_g0145 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       761  (0.0424452); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1909.23
//
Query:       KHJ31255.1  [L=820]
Description: putative cell division control protein cdc48 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.8e-97  321.0   0.0    3.8e-47  160.0   0.0    2.6  2  AAA              ATPase family associated with various cellul
    1.8e-25   88.4   2.9    1.8e-13   50.0   0.2    2.8  2  AAA_lid_3        AAA+ lid domain
    4.5e-20   71.6   0.5    1.5e-19   69.9   0.5    2.0  1  CDC48_N          Cell division protein 48 (CDC48), N-terminal
    9.3e-14   51.5   0.2    1.9e-05   24.5   0.0    3.6  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    1.5e-13   51.3   0.0    2.6e-07   30.9   0.0    2.8  2  AAA_2            AAA domain (Cdc48 subfamily)
    1.8e-12   47.6   0.0    1.1e-05   25.6   0.0    2.8  2  AAA_33           AAA domain
    1.1e-11   45.4   0.0    0.00013   22.4   0.0    4.3  2  AAA_16           AAA ATPase domain
    8.7e-11   42.0   1.8    1.5e-05   25.0   0.1    4.1  3  AAA_5            AAA domain (dynein-related subfamily)
      5e-09   35.8   0.0     0.0017   17.6   0.0    2.6  2  TIP49            TIP49 P-loop domain
    6.3e-09   36.2   0.5      0.057   13.7   0.0    4.6  4  AAA_22           AAA domain
    6.4e-07   29.1   0.1    1.5e-06   27.9   0.1    1.7  1  CDC48_2          Cell division protein 48 (CDC48), domain 2
    6.8e-07   29.2   0.0      0.046   13.4   0.0    2.9  2  IstB_IS21        IstB-like ATP binding protein
      1e-06   28.3   0.6      0.052   12.9   0.1    2.6  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    1.4e-06   28.9   0.0       0.04   14.5   0.0    2.9  2  AAA_18           AAA domain
    2.3e-06   27.7   0.0       0.02   15.0   0.0    2.7  2  AAA_14           AAA domain
    2.8e-06   27.6   0.0      0.041   14.3   0.0    2.9  2  RNA_helicase     RNA helicase
    4.4e-06   26.2   0.2       0.91    8.8   0.0    3.4  3  ATPase           KaiC
    6.2e-06   25.8   0.1      0.057   12.9   0.0    3.0  2  AAA_7            P-loop containing dynein motor region
    9.9e-06   25.5   0.3    8.2e-05   22.5   0.1    2.4  2  Vps4_C           Vps4 C terminal oligomerisation domain
    3.5e-05   23.6   0.0       0.39   10.4   0.0    3.3  2  Sigma54_activat  Sigma-54 interaction domain
    4.2e-05   23.9   0.0       0.33   11.2   0.0    2.9  2  AAA_28           AAA domain
    6.4e-05   22.5   0.1        0.4   10.1   0.0    2.5  2  PhoH             PhoH-like protein
    6.6e-05   22.2   0.0       0.03   13.5   0.0    2.7  2  DUF815           Protein of unknown function (DUF815)
    8.4e-05   21.8   0.0      0.085   11.9   0.0    2.3  2  Parvo_NS1        Parvovirus non-structural protein NS1
    8.7e-05   23.1   0.0       0.57   10.7   0.0    3.4  2  ABC_tran         ABC transporter
    0.00012   21.7   5.7        2.6    7.6   0.1    4.8  5  AAA_25           AAA domain
    0.00013   21.7   0.0       0.77    9.5   0.0    2.9  2  AAA_24           AAA domain
    0.00034   20.5   0.0       0.66    9.8   0.0    2.7  2  Bac_DnaA         Bacterial dnaA  protein
    0.00051   19.9   0.0        1.4    8.8   0.0    2.6  2  AAA_3            ATPase family associated with various cellul
    0.00057   19.9   0.0       0.13   12.2   0.0    2.5  2  ResIII           Type III restriction enzyme, res subunit
    0.00061   19.8   0.0       0.58   10.2   0.0    2.5  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
      0.001   18.9   0.0        1.7    8.3   0.0    2.6  2  AAA_11           AAA domain
     0.0011   19.4   3.4       0.87   10.0   0.0    3.7  3  AAA_17           AAA domain
     0.0015   17.8   0.0       0.68    9.1   0.0    2.3  2  DUF2075          Uncharacterized conserved protein (DUF2075)
     0.0015   18.2   0.2        2.3    7.9   0.0    2.7  2  AAA_30           AAA domain
      0.004   17.5   0.4        9.1    6.6   0.0    3.7  2  AAA_19           AAA domain
     0.0051   16.8   0.0         10    6.0   0.0    3.7  3  ATPase_2         ATPase domain predominantly from Archaea
     0.0076   16.4   0.0        1.4    9.0   0.0    2.7  2  Sigma54_activ_2  Sigma-54 interaction domain
     0.0086   15.8   0.0       0.67    9.6   0.0    2.6  2  Viral_helicase1  Viral (Superfamily 1) RNA helicase
  ------ inclusion threshold ------
       0.01   15.8   0.1          3    7.7   0.0    2.9  3  NACHT            NACHT domain
      0.015   14.7   0.0        2.2    7.6   0.0    2.3  2  IPT              Isopentenyl transferase
      0.019   14.2   0.0       0.88    8.7   0.0    2.6  3  KAP_NTPase       KAP family P-loop domain
      0.024   14.6   1.3        3.6    7.5   0.0    3.9  3  NTPase_1         NTPase
      0.027   13.7   0.0          2    7.5   0.0    2.5  2  NB-ARC           NB-ARC domain
      0.032   13.5   0.0        7.4    5.8   0.0    2.7  2  Zeta_toxin       Zeta toxin
      0.033   14.0   1.0       0.25   11.2   0.4    2.6  2  eIF-1a           Translation initiation factor 1A / IF-1
      0.042   13.3   0.0       0.38   10.2   0.0    2.1  2  UFD1             Ubiquitin fusion degradation protein UFD1
       0.06   13.1   0.4         10    5.8   0.0    3.1  2  Cytidylate_kin   Cytidylate kinase
      0.069   13.3   0.0        3.5    7.7   0.0    2.4  2  Cytidylate_kin2  Cytidylate kinase-like family
       0.15   11.7   0.0         12    5.5   0.0    3.1  2  Zot              Zonular occludens toxin (Zot)
       0.23   10.4   0.1        8.4    5.3   0.0    2.4  2  AAA_6            Hydrolytic ATP binding site of dynein motor 


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.4   0.0   3.5e-49   1.2e-46       1     131 [.     257     386 ..     257     387 .. 0.97
   2 !  160.0   0.0   1.1e-49   3.8e-47       1     131 [.     531     663 ..     531     664 .. 0.96

  Alignments for each domain:
  == domain 1  score: 158.4 bits;  conditional E-value: 3.5e-49
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 vl++GppGtGKTl+a+ava+e+g+ f+ i+g+e++sk+ gese+++r+ f+ea++++ p i+fiDEid++a++r++++ e+e+rvv+qLlt +dg+k +
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNS-PAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKAR 354
                 799*****************************************************9.****************************************7 PP

                 SSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA 100 eskvivigatnrpdkldpallr.gRfdrkieie 131
                  s+v+v++atnrp+++dpal+r gRfdr++ i+
  KHJ31255.1 355 -SNVVVMAATNRPNSIDPALRRfGRFDREVDIG 386
                 .66*************************99875 PP

  == domain 2  score: 160.0 bits;  conditional E-value: 1.1e-49
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH...TTCCCHHHHHHHHHHHHHHHHT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgv 96 
                 vl+yGppGtGKTllakava+e++++f++++g+ells+++gese++ir++f++a++ a p+++f+DE+d++aksr    g++ + ++rvvnqLlte+dg+
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANECSANFISVKGPELLSMWFGESESNIRDIFDKARAAA-PCVVFLDELDSIAKSRggsVGDAGGASDRVVNQLLTEMDGM 628
                 79******************************************************9.****************987778999**************** PP

                 TTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  97 kkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 ++k++ v+vigatnrp++ld+al r gR+d  ++++
  KHJ31255.1 629 TSKKN-VFVIGATNRPEQLDNALCRpGRLDTLVYVP 663
                 **755.*************************99987 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.2   5.2e-16   1.8e-13       1      40 [.     409     448 ..     409     469 .. 0.92
   2 !   38.1   0.2   2.8e-12   9.8e-10       1      40 [.     686     726 ..     686     740 .. 0.90

  Alignments for each domain:
  == domain 1  score: 50.0 bits;  conditional E-value: 5.2e-16
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgikeitm 40 
                 dvdl+++A++T+Gy+G D+a+lc eAa+  +r++++ i+ 
  KHJ31255.1 409 DVDLEQIASETHGYVGSDIASLCSEAAMQQIREKMDLIDL 448
                 9*********************************998764 PP

  == domain 2  score: 38.1 bits;  conditional E-value: 2.8e-12
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgik.eitm 40 
                 dvd++ +A++T+G+SGADl  + ++A+ lA++++i  ei  
  KHJ31255.1 686 DVDIAYIASKTHGFSGADLGFITQRAVKLAIKESISlEIQR 726
                 9********************************99844765 PP

>> CDC48_N  Cell division protein 48 (CDC48), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.9   0.5   4.3e-22   1.5e-19       2      84 ..      42     122 ..      41     124 .. 0.94

  Alignments for each domain:
  == domain 1  score: 69.9 bits;  conditional E-value: 4.3e-22
                 EEEECCS.S-CSSTTEEEE-HHHHHHHTS-TTSEEEEEC.CCC.EEEEEEEBSTTSTTTTEEEE-HHHHHHHT--TTEEEEEEEE- CS
     CDC48_N   2 LrVaeap.qedvgrgivridpedmeelglepgdvveieg.krk.TvaivwpaepedegkgiIrmdgvtRknagvsiGdkVtVrkae 84 
                 L+V++a  +   ++++++++ ++me l+l++gd+v ++g krk Tv iv+++++ d+  g+ rm++v+R+n++v+ Gd VtV+++ 
  KHJ31255.1  42 LIVTDAInD---DNSVIALSNNTMETLQLFRGDTVLVKGkKRKdTVLIVLADDDLDD--GSARMNRVVRHNLRVKHGDIVTVHPCP 122
                 889999977...***************************9999*********99965..*************************96 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0   5.4e-08   1.9e-05      36      99 ..     257     328 ..     251     378 .. 0.79
   2 !   22.4   0.0   2.3e-07     8e-05      36      69 ..     531     564 ..     524     609 .. 0.75

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 5.4e-08
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPvl......ekagdlaalltnleek..dvlfideihrlsra 99 
                 vl++GpPG Gkt +a+ +a+e g+ +    gP +      e +++l   + + e++   ++fidei  ++++
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVANETGAFFFLINGPEImskmagESESNLRKAFEEAEKNspAIIFIDEIDSIAPK 328
                 9*******************************8833222223445665565555542259******988766 PP

  == domain 2  score: 22.4 bits;  conditional E-value: 2.3e-07
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPvl 69 
                 vl+yGpPG Gkt lak +a+e  +++ +  gP l
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANECSANFISVKGPEL 564
                 9*******************************87 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.0   7.4e-10   2.6e-07       6     109 ..     257     354 ..     252     365 .. 0.83
   2 !   17.2   0.0   1.2e-05    0.0044       6     105 ..     531     627 ..     526     633 .. 0.73

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 7.4e-10
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS..EEEEETGGG----.---------HHHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpk.essgadvSregVqrdLLq 101
                 +l+ gp g+Gkt++a+a+a+   +     +  ++  e++     +   +++   +++  +ae++   i+++DEid i+pk ++++ +v r  V+  LL 
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVANETGA----FFFLINGPEIMS----KMAGESESNLRKAFEEAEKNSpaIIFIDEIDSIAPKrDKTNGEVER-RVVSQLLT 346
                 6788*****************995....99**********....77777777777777777777778*************5555666655.6888999* PP

                 HHH--EE- CS
       AAA_2 102 ileggtlt 109
                 +++g +++
  KHJ31255.1 347 LMDGMKAR 354
                 ***97765 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 1.2e-05
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG---..----THHHHHHHHHTTT-HHHHTTSEEEEETGGG----...---------HHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegGivllDEidKihpk...essgadvSregVqrdL 99 
                 +l+ gp g+Gkt+laka+a+  ++    ++i +   ell     e+e+ +     ++    +a+   +v+lDE+d i+++   +   a   ++ V++ L
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANECSA----NFISVKGPELLSmwFGESESNIRDIFDKA----RAAAPCVVFLDELDSIAKSrggSVGDAGGASDRVVNQL 621
                 799*******************96....99999999999944344444444444333....334456************98533334444567899999 PP

                 HHHHH- CS
       AAA_2 100 Lqileg 105
                 L  ++g
  KHJ31255.1 622 LTEMDG 627
                 987777 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   3.2e-08   1.1e-05       2      83 ..     257     367 ..     257     413 .. 0.70
   2 !   18.9   0.0   3.7e-06    0.0013       2      78 ..     531     611 ..     531     679 .. 0.61

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 3.2e-08
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqqskt............................dytrvldrlyqilnelarkalsag 70 
                 vl+ G+pG+GK+  a+ +++++g  ++l++ ++++++++g+ + +++                               +v+ r+  +l  l  + ++a+
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVANETGafFFLINGPEIMSKMAGESESNLRkafeeaeknspaiifideidsiapkrdkTNGEVERRVVSQLLTLM-DGMKAR 354
                 79**********************999************96555554455555566666777777777766653322235555555554444.455555 PP

      AAA_33  71 rnvildatnlsrr 83 
                  nv++ a   +++
  KHJ31255.1 355 SNVVVMAATNRPN 367
                 5555544444444 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 3.7e-06
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqqskt...dytrvldrlyqilnelarkalsagrnvildat 78 
                 vl+ G+pG+GK+ la+ ++++    ++ +  ++l+++ fg+ + +++   d +r++  +  +l + +++ ++++++ + da+
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANECSanFISVKGPELLSMWFGESESNIRdifDKARAAAPCVVFL-DELDSIAKSRGGSVGDAG 611
                 799****************99998888899999999999977776665664444444455555.333333444444444444 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   0.00021     0.075      21      59 ..     251     286 ..     227     358 .. 0.73
   2 !   22.4   0.0   3.7e-07   0.00013      25     125 ..     529     624 ..     521     637 .. 0.64

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 0.00021
      AAA_16  21 sgrpelvllsGesGvGKsslvrellralekdggiflrgk 59 
                    p+ vl  G++G+GK+ ++r++++   ++g++f+  +
  KHJ31255.1 251 IKPPRGVLMFGPPGTGKTLMARAVAN---ETGAFFFLIN 286
                 445699******************96...5555554444 PP

  == domain 2  score: 22.4 bits;  conditional E-value: 3.7e-07
      AAA_16  25 elvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesael.eawrekleeala.....avpelagaeas 117
                 + vl++G++G+GK+ l+++++++ +++   f++ k  +l     +s+ +   ++ + +r++ d+a++a++   + ++l++  a     +v+++ ga+ +
  KHJ31255.1 529 RGVLFYGPPGTGKTLLAKAVANECSAN---FISVKGPEL-----LSM-WFGESE-SNIRDIFDKARAAAPcVVFLDELDSI-AksrggSVGDAGGASDR 616
                 89**********************999...999999999.....444.444423.67777777744433303333333333.24666555555555555 PP

      AAA_16 118 rllellkr 125
                  +++ll++
  KHJ31255.1 617 VVNQLLTE 624
                 55555554 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       7.1   2.5e+03      63     124 ..       6      62 ..       4      72 .. 0.68
   2 !   25.0   0.1   4.3e-08   1.5e-05       1     136 [.     256     375 ..     256     377 .. 0.78
   3 !   12.8   0.0   0.00026      0.09       2      32 ..     531     561 ..     530     652 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 7.1
                 --G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..-SSSEEE---......-EEEEEESS-- CS
       AAA_5  63 aregeilvlDEveraesevlnsLlslleerrllleeggelvkaknddllerfrviatanpld 124
                 a++++++ l++   ae++++++  + + +++  ++++  +++a ndd     +via++n+ +
  KHJ31255.1   6 ATRKKTVKLEDASGAEQKTIDATATAILKKKKKPNSLI-VTDAINDD----NSVIALSNNTM 62 
                 55677777888888888888888888877777744443.33344444....78999998876 PP

  == domain 2  score: 25.0 bits;  conditional E-value: 4.3e-08
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.....G-SEEEEESGGG--HHHHHHHHHHHHSSEE CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.....egeilvlDEveraesevlnsLlslleerrl 94 
                 +vl+ GppGtgK+ +a+ +a  +++ ++ +++++ +++     + ++             +a++     +++i+++DE++ + ++  ++ +   e+r +
  KHJ31255.1 256 GVLMFGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNL------------RKAFEeaeknSPAIIFIDEIDSIAPKR-DKTNGEVERRVV 341
                 599*******************************9987554444444............33333333789**********999874.667777777777 PP

                 E..-SSSEEE---......-EEEEEESS--.-TT-TTHHHHT CS
       AAA_5  95 lleeggelvkaknddllerfrviatanpldrslnelspalrs 136
                 +  ++ +l++  +  + +++ v+a++n+++    +++palr+
  KHJ31255.1 342 S--QLLTLMDGMK--ARSNVVVMAATNRPN----SIDPALRR 375
                 7..7777776655..344499999999998....99999986 PP

  == domain 3  score: 12.8 bits;  conditional E-value: 0.00026
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE- CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvql 32 
                 vl  GppGtgK+ la+ +a    +++  v +
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANECSANFISVKG 561
                 899*************999877766666655 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   4.9e-06    0.0017      51     107 ..     255     306 ..     244     363 .. 0.80
   2 !   15.5   0.0   2.2e-05    0.0076      51      97 ..     529     573 ..     522     584 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 4.9e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkktevltqalrksi 107
                 r+vL+ Gp+gtGkt +a a+++e g    f  ++g e+ s     +e    +lrk+ 
  KHJ31255.1 255 RGVLMFGPPGTGKTLMARAVANETG--AFFFLINGPEIMSKMAGESES---NLRKAF 306
                 89*********************99..78999*******998887774...455554 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 2.2e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkkte 97 
                 r+vL+ Gp+gtGkt la a+++e +    f++++g e+ s+    +e
  KHJ31255.1 529 RGVLFYGPPGTGKTLLAKAVANECS--ANFISVKGPELLSMWFGESE 573
                 99*********************98..6899**99999998666555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   0.00059      0.21       9      29 ..     258     278 ..     252     293 .. 0.84
   2 ?    4.6   0.0       0.1        36      72     117 ..     296     349 ..     281     364 .. 0.74
   3 !   13.7   0.0   0.00016     0.057       9      29 ..     532     552 ..     527     586 .. 0.75
   4 ?   -0.3   0.0       3.5   1.2e+03      84     112 ..     581     621 ..     570     646 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00059
      AAA_22   9 vvtGesGtGKTtllrrlleql 29 
                 + +G++GtGKT+ +r ++++ 
  KHJ31255.1 258 LMFGPPGTGKTLMARAVANET 278
                 679**************9986 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.1
      AAA_22  72 rlsseellealeqalraravielliiDEaqhlr....s......eealeeLrslln 117
                 + s++ l++a+e+a ++  +  ++ iDE++ +     +       +++++L +l++
  KHJ31255.1 296 GESESNLRKAFEEAEKNSPA--IIFIDEIDSIApkrdKtngeveRRVVSQLLTLMD 349
                 46788889999999888888..*********9876441555666777777777766 PP

  == domain 3  score: 13.7 bits;  conditional E-value: 0.00016
      AAA_22   9 vvtGesGtGKTtllrrlleql 29 
                 + +G++GtGKT+l++ ++++ 
  KHJ31255.1 532 LFYGPPGTGKTLLAKAVANEC 552
                 679**************9985 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 3.5
      AAA_22  84 qalraravielliiDEaqhlr.....s........eealeeL 112
                 + +ra+a + ++ +DE + +      s        ++++++L
  KHJ31255.1 581 DKARAAA-PCVVFLDELDSIAksrggSvgdaggasDRVVNQL 621
                 3344444.59********997654331444445555666655 PP

>> CDC48_2  Cell division protein 48 (CDC48), domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.1   4.3e-09   1.5e-06       4      63 ..     144     206 ..     141     207 .. 0.91

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 4.3e-09
                 CCCCH.HHHCCCTT..EEE-TTEEEEECCTCCCEEEEEEEECCCCSCEEECTSCCEEESTTCC CS
     CDC48_2   4 gdema.ylkrqFlg..rpvtkGdlvvfefkgqeiklvVvstePkgpvgitetTeielgtkpve 63 
                 g +++  l  +F    rpv +Gdl++++  +++++++Vv+++P    ++  +T i+++ +p +
  KHJ31255.1 144 GSLFDvFLAPYFREayRPVRQGDLFTVRGGMRQVEFKVVEVDPPVYGIVAQDTVIHCEGEPIQ 206
                 6667777888888888********************************************987 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   0.00027     0.096      48      70 ..     255     277 ..     244     358 .. 0.82
   2 !   13.4   0.0   0.00013     0.046      49      75 ..     530     556 ..     525     564 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00027
   IstB_IS21  48 enivllGpsGvGKshlaialgve 70 
                  +++++Gp+G+GK+ +a a++ e
  KHJ31255.1 255 RGVLMFGPPGTGKTLMARAVANE 277
                 5799***************9876 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 0.00013
   IstB_IS21  49 nivllGpsGvGKshlaialgveavrag 75 
                 ++++ Gp+G+GK+ la a++ e  ++ 
  KHJ31255.1 530 GVLFYGPPGTGKTLLAKAVANECSANF 556
                 7899***************99876655 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.1   0.00015     0.052      25      42 ..     257     274 ..     249     278 .. 0.90
   2 !   12.8   0.0   0.00016     0.055      25      43 ..     531     549 ..     524     554 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00015
  Mg_chelatase  25 lllvGppGsGKtmlakrl 42 
                   +l++GppG+GKt++a+++
    KHJ31255.1 257 VLMFGPPGTGKTLMARAV 274
                   89*************987 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 0.00016
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +l++GppG+GKt+lak+++
    KHJ31255.1 531 VLFYGPPGTGKTLLAKAVA 549
                   89*************9875 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0     0.001      0.36       2      25 ..     258     295 ..     257     365 .. 0.60
   2 !   14.5   0.0   0.00011      0.04       1      31 [.     531     579 ..     531     603 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.001
      AAA_18   2 lltGtpGvGKttlakeLskrl.gf.............g 25 
                 l  G+pG+GKt +a+++++++ +f              
  KHJ31255.1 258 LMFGPPGTGKTLMARAVANETgAFfflingpeimskmA 295
                 678***************99855576665533333330 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 0.00011
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf.................gvnlrdv 31 
                 +l  G+pG+GKt lak++++++ ++                   n+rd+
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANECsANfisvkgpellsmwfgesESNIRDI 579
                 6789*****************9433455555544444444444444444 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   5.6e-05      0.02       5      78 ..     257     327 ..     254     367 .. 0.74
   2 !    9.8   0.0    0.0022      0.77       5      76 ..     531     599 ..     528     664 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 5.6e-05
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpe.kllelileklkeekktylflDEiqevpe 78 
                 +++ G+  +GKT +++ +++e       ++ in  +   k++ ++e +l +++ e  +++   ++f+DEi  +  
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVANETG---AFFFLINGPEIMSKMAGESEsNLRKAFEEA-EKNSPAIIFIDEIDSIAP 327
                 6778999************9998...888999999988887777662444555554.555999*******99843 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.0022
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 ++  G+  +GKT l+k +++e      +++ ++  +     + ++e++++ i++k+++    ++flDE   +
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANECS---ANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSI 599
                 56789999*******99997766...6666666666555555566666777777755558899*****9887 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0    0.0022      0.77       1      29 [.     257     285 ..     257     328 .. 0.82
   2 !   14.3   0.0   0.00012     0.041       1      41 [.     531     574 ..     531     602 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.0022
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklklk 29 
                   ++++Gp+g+GK+++a+ +a++    + l+
    KHJ31255.1 257 VLMFGPPGTGKTLMARAVANETGAFFFLI 285
                   5799*************999877665444 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 0.00012
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl...klkkkdsvysrnped 41 
                   +++yGp+g+GK++lak +a++ + ++   k ++  s++++++e+
    KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANECSANFisvKGPELLSMWFGESES 574
                   689***************99998776555444444455555555 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0    0.0027      0.95      15      37 ..     250     272 ..     243     280 .. 0.86
   2 ?    4.4   0.0     0.058        20     121     157 ..     315     354 ..     283     376 .. 0.64
   3 !    8.8   0.0    0.0026      0.91      13      37 ..     522     546 ..     513     556 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0027
      ATPase  15 GipegrvvlitGepGtGKtifal 37 
                 Gi   r vl+ G pGtGKt++a 
  KHJ31255.1 250 GIKPPRGVLMFGPPGTGKTLMAR 272
                 78888999*************96 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.058
      ATPase 121 krvviDsitgl...ayeekeavaReilrqlvrvlkklgvT 157
                   + iD i+++     +++ +v R+ + ql++ + +++  
  KHJ31255.1 315 AIIFIDEIDSIapkRDKTNGEVERRVVSQLLTLMDGMKAR 354
                 44555555555321566667789***********877654 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0026
      ATPase  13 kgGipegrvvlitGepGtGKtifal 37 
                 k G+   r vl +G pGtGKt++a+
  KHJ31255.1 522 KFGLSPSRGVLFYGPPGTGKTLLAK 546
                 558888999**************97 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0    0.0018      0.62      34      57 ..     255     278 ..     244     337 .. 0.82
   2 !   12.9   0.0   0.00016     0.057      32      63 ..     527     557 ..     518     605 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0018
       AAA_7  34 kpvllvGptGtGKtviikdllkkl 57 
                 + vl+ Gp GtGKt++++ + ++ 
  KHJ31255.1 255 RGVLMFGPPGTGKTLMARAVANET 278
                 679*************99988765 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 0.00016
       AAA_7  32 nkkpvllvGptGtGKtviikdllkkldkekyl 63 
                  ++ vl++Gp GtGKt+++k + ++++  +++
  KHJ31255.1 527 PSRGVLFYGPPGTGKTLLAKAVANECS-ANFI 557
                 5678*****************999998.4444 PP

>> Vps4_C  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       3.6   1.2e+03      12      44 ..     441     478 ..     431     479 .. 0.63
   2 !   22.5   0.1   2.3e-07   8.2e-05      26      59 ..     747     780 ..     726     781 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 3.6
      Vps4_C  12 iemtwmdip.....sdkllePpvtlkDflkalkkarpt 44 
                 ++m + d++     ++ l    vt++ f  al  + p+
  KHJ31255.1 441 EKMDLIDLDedtidAEVLDSLGVTMENFRFALGISNPS 478
                 56777776655552444444599999999988777665 PP

  == domain 2  score: 22.5 bits;  conditional E-value: 2.3e-07
      Vps4_C  26 ePpvtlkDflkalkkarptVskeDLekheeFTke 59 
                  P +t  +f +a+++ar++Vs+ +++++e F ++
  KHJ31255.1 747 VPMLTKAHFAEAMASARRSVSDVEIRRYEAFAQS 780
                 3589***************************886 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0    0.0011      0.39      23      64 ..     255     293 ..     241     376 .. 0.68
   2 !    9.0   0.0    0.0031       1.1      24      47 ..     530     553 ..     514     601 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.0011
                      S-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS-TT CS
  Sigma54_activat  23 lsvlitGesGtGKellaraiheaskrkekpfvavncaaipee 64 
                        vl+ G  GtGK+l+ara+ +++    + f  +n  +i ++
       KHJ31255.1 255 RGVLMFGPPGTGKTLMARAVANET---GAFFFLINGPEIMSK 293
                      569****************97654...466666666655444 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0031
                      -EEEECSTTSSHHHHHHHHHHHST CS
  Sigma54_activat  24 svlitGesGtGKellaraiheask 47 
                       vl  G  GtGK+lla+a+ ++ +
       KHJ31255.1 530 GVLFYGPPGTGKTLLAKAVANECS 553
                      69****************988665 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0    0.0033       1.2       2      36 ..     257     296 ..     256     323 .. 0.69
   2 !   11.2   0.0   0.00095      0.33       2      31 ..     531     565 ..     530     594 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0033
      AAA_28   2 ivitGgestGKTtlleaLaar.gyp..vv..pEaareile 36 
                 + ++G+++tGKT +++a a++ g     +  pE++ ++  
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVANEtGAFffLIngPEIMSKMAG 296
                 6789***************765433113345666655554 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00095
      AAA_28   2 ivitGgestGKTtlleaLaar...gypvv..pEaa 31 
                 + + G+++tGKT l++a a++   ++  v  pE  
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANEcsaNFISVkgPELL 565
                 6799***************7655543333356655 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0    0.0011       0.4      22      40 ..     257     275 ..     242     280 .. 0.87
   2 !    9.7   0.0    0.0015      0.54      22      42 ..     531     551 ..     525     558 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0011
                 EEEE--TTSSTTHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavala 40 
                 v ++Gp GtGKt++a a+a
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVA 275
                 7899***********9998 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0015
                 EEEE--TTSSTTHHHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavalave 42 
                 v   Gp GtGKt+la a+a e
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANE 551
                 5678***********999965 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0      0.02       6.9      52     116 ..     253     322 ..     217     373 .. 0.62
   2 !   13.5   0.0   8.6e-05      0.03      18      81 ..     484     556 ..     465     597 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.02
      DUF815  52 pannvLLwGarGtGKSslvkallneyaeeg..Lrlievekedl.kelpklvellr..erperfilfvDDL 116
                 p + vL++G  GtGK  + +a+ ne+ +    +   e+  +   ++ ++l ++ +  e++   i+f+D +
  KHJ31255.1 253 PPRGVLMFGPPGTGKTLMARAVANETGAFFflINGPEIMSKMAgESESNLRKAFEeaEKNSPAIIFIDEI 322
                 56779******************99876543222223433322022233333333113344566676655 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 8.6e-05
      DUF815  18 pveevdevklddLvgidkqkealvente.......qfle.g.lpannvLLwGarGtGKSslvkallneyaeeg 81 
                 +v ev +v++dd+ g+++ k++l+e ++       +f + g  p++ vL++G  GtGK  l ka+ ne++++ 
  KHJ31255.1 484 AVVEVPNVRWDDIGGLEEVKRELIESVQypvdhpeKFHKfGlSPSRGVLFYGPPGTGKTLLAKAVANECSANF 556
                 566778999**************998862222222454432368999********************998875 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0059       2.1     117     140 ..     257     280 ..     250     286 .. 0.86
   2 !   11.9   0.0   0.00024     0.085     117     138 ..     531     552 ..     525     560 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0059
   Parvo_NS1 117 vwfyGpantGktnlaeaIakavpl 140
                 v+++Gp+ tGkt +a+a a+ +  
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVANETGA 280
                 7899**************997665 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00024
   Parvo_NS1 117 vwfyGpantGktnlaeaIakav 138
                 v+fyGp+ tGkt la+a a+ +
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANEC 552
                 89****************9854 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0     0.012       4.3       7     102 ..     250     453 ..     247     465 .. 0.63
   2 !   10.7   0.0    0.0016      0.57       5      46 ..     522     561 ..     519     635 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.012
                 EEETTSEEEEEESTTSSHHHHHHHHTTSS--....SEE.EE..............................EETTCEGGGB-HHHCCHCEEEE-SS--S CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxx.xx..............................xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   7 klkegekvaivGenGaGKStLlkllagllkp....teG.ei..............................lldgkdlkeqeleslrkeigvlpqepql 70 
                  +k+ + v ++G+ G+GK+ +++++a+++       +G ei                              ++d+   k+ +++  + e +v++q  +l
  KHJ31255.1 250 GIKPPRGVLMFGPPGTGKTLMARAVANETGAffflINGpEImskmagesesnlrkafeeaeknspaiifidEIDSIAPKR-DKTNGEVERRVVSQLLTL 347
                 67777788999*********999999998665555222133666666667777776666666666665333333333333.555566666777777777 PP

                 -TTSBHHHH..........................................................................HHHTCHHHHHHHSTTG CS
                 xxxxxxxxx..........................................................................xxxxxxxxxxxxxxxx RF
    ABC_tran  71 fpeltvren..........................................................................esdeeiekalsklglk 95 
                  +++++r+n                                                                           s++ ++++++k++l+
  KHJ31255.1 348 MDGMKARSNvvvmaatnrpnsidpalrrfgrfdrevdigipdptgrleilqihtknmklgedvdleqiasethgyvgsdiaslCSEAAMQQIREKMDLI 446
                 777777777787777766666666666666666666666666666666666666666666666666665555555555555555555566666666666 PP

                 GTTCBGE CS
                 xxxxxxx RF
    ABC_tran  96 elkdtvv 102
                 +l+++++
  KHJ31255.1 447 DLDEDTI 453
                 6666655 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.0016
                 EEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   5 slklkegekvaivGenGaGKStLlkllagllkpteGeilldg 46 
                 ++ l++++ v + G+ G+GK+ L+k++a++ +  +  i ++g
  KHJ31255.1 522 KFGLSPSRGVLFYGPPGTGKTLLAKAVANECS--ANFISVKG 561
                 6889999********************99875..34455555 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.33   1.2e+02      68     106 ..      78     116 ..      61     143 .. 0.72
   2 ?    4.7   0.1     0.058        20      37      53 ..     258     274 ..     253     283 .. 0.86
   3 ?    5.5   0.0     0.031        11     130     177 ..     302     349 ..     280     362 .. 0.77
   4 !    7.6   0.1    0.0074       2.6      36      56 ..     531     551 ..     520     587 .. 0.83
   5 ?   -1.0   0.0       3.2   1.1e+03     129     172 ..     575     621 ..     556     638 .. 0.70

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.33
      AAA_25  68 apeqgkVlyvsaEdsedelrrRlravgealrddarllvl 106
                 + ++ +Vl+v a+d+ d+   R+ +v +++ + ++ +++
  KHJ31255.1  78 KKRKDTVLIVLADDDLDDGSARMNRVVRHNLRVKHGDIV 116
                 457889*******************99887333333333 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.058
      AAA_25  37 llaGapgtGKttlaldl 53 
                 l +G+pgtGKt +a  +
  KHJ31255.1 258 LMFGPPGTGKTLMARAV 274
                 789*********98655 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.031
      AAA_25 130 vdaleaaieevegvrlvviDplsralggdensnsdv.galvealeriar 177
                 +++  +++e+ + ++ + iD ++++ +   + n +v +++v++l  + +
  KHJ31255.1 302 LRKAFEEAEK-NSPAIIFIDEIDSIAPKRDKTNGEVeRRVVSQLLTLMD 349
                 4455566777.66***************777788877****99988766 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.0074
      AAA_25  36 allaGapgtGKttlaldlala 56 
                 +l++G+pgtGKt la  +a +
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANE 551
                 689***********9877755 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 3.2
      AAA_25 129 dvdaleaaieevegvrlvviDplsralgg...densnsdv.galveal 172
                  ++++ +++++ + + +v +D l+++      +  ++  + +++v++l
  KHJ31255.1 575 NIRDIFDKARA-AAPCVVFLDELDSIAKSrggSVGDAGGAsDRVVNQL 621
                 56777788888.558888888888865543446666655566666665 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0    0.0029         1       5      75 ..     257     323 ..     254     333 .. 0.61
   2 !    9.5   0.0    0.0022      0.77       5      22 ..     531     548 ..     528     605 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0029
      AAA_24   5 iliyGpsgiGKTtlakel..gpkplfidtekGlksldadkfpdieswedfldevvelaaeladyktlviDtid 75 
                 +l++Gp+g+GKT +a+    +  ++f+ + +G   +    ++   s  +++++++e +++ +   +++iD id
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVanETGAFFF-LINGPEIMSKMAGE---SESNLRKAFEEAEKNSP--AIIFIDEID 323
                 789************999753333333.33333333333333...55566666666555555..566666666 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0022
      AAA_24   5 iliyGpsgiGKTtlakel 22 
                 +l yGp+g+GKT lak  
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAV 548
                 688************987 PP

>> Bac_DnaA  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0    0.0019      0.66      37     195 ..     257     416 ..     252     442 .. 0.69
   2 !    7.6   0.0    0.0086         3      37      64 ..     531     558 ..     526     569 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0019
                 EEEE-SSSSSHHHHHHHHHHHHHHHSSSS-EEEEEHHHHHHHHHHHHHTT-HHHHHHHHTT-.SEEEEE-GGGGTT-H.HHHHH........HHHHHHH CS
    Bac_DnaA  37 lfiygevGlGktHLlkaignevlenapelrvvYltaeeFlnelvkalrdkkaeefkeklrkv.DvLliDDiqflagke.ktqee........lfhtfna 125
                 ++++g+ G Gkt + +a++ne+      +    +++ e +++++   +++  ++f e  ++   ++ iD+i  +a k  kt+ e        l+++++ 
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVANETG-----AFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSpAIIFIDEIDSIAPKRdKTNGEverrvvsqLLTLMDG 350
                 799*********99999988765.....5568899*********************99886516788*******9875244433112211114555555 PP

                 HHTTT-EEEEEESS-TTT-SS--HHHHHHHHSSEEEE-----HHHHHHHHHHHHHHTT----TTH.HHHHH CS
    Bac_DnaA 126 lleegkqvvlssDrsPkeleeledrlrsrfeaGlvvdieppdletrlailkkkieaeklevpeev.lefia 195
                 +   ++ vv+++   P++++    r+  rf++ + + i  pd   rl+il+ +  ++++++ e+v le ia
  KHJ31255.1 351 MKARSNVVVMAATNRPNSIDPALRRF-GRFDREVDIGI--PDPTGRLEILQIH--TKNMKLGEDVdLEQIA 416
                 55566779999999**9998766664.68888665555..6777788888644..4444444444333333 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0086
                 EEEE-SSSSSHHHHHHHHHHHHHHHSSS CS
    Bac_DnaA  37 lfiygevGlGktHLlkaignevlenape 64 
                 +++yg+ G Gkt L ka++ne  +n+ +
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANECSANFIS 558
                 799*****************99988755 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0    0.0039       1.4       2      48 ..     257     301 ..     256     369 .. 0.64
   2 !    8.3   0.0    0.0056         2       2      30 ..     531     559 ..     530     567 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0039
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfe 48 
                 vl+ g PG++ktl+++a+a+  ++ f  i   p+++ s + G +  +
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVANETGAFFFLIN-GPEIM-SKMAGESESN 301
                 78999***************9998776664.56665.4455655444 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0056
       AAA_3   2 vllegvPGlaktllvkalakaldlefkri 30 
                 vl+ g PG++ktll+ka+a+  +++f  +
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANECSANFISV 559
                 788999***************99998766 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   0.00038      0.13      22      85 ..     252     315 ..     226     355 .. 0.71
   2 ?    5.0   0.0     0.064        23      23      51 ..     527     555 ..     498     575 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00038
                 .TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG..........G CS
      ResIII  22 krdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseayke......i 85 
                 k  + +l+  + GtGKTl+a +++ +         f+fl+++ ++++++  e ++ l +a++e      +
  KHJ31255.1 252 KPPRGVLMFGPPGTGKTLMARAVANETG------AFFFLINGPEIMSKMAGESESNLRKAFEEaeknspA 315
                 555666777899******9887777665......59**************88877777777663333332 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.064
                 TTSEEEEEESTTSTHHHHHHHHHHHH-S. CS
      ResIII  23 rdkrglikmaTGtGKTlvaaklierllkk 51 
                   + +l+  + GtGKTl+a +++ +++ +
  KHJ31255.1 527 PSRGVLFYGPPGTGKTLLAKAVANECSAN 555
                 4567789999*********9998888765 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.017       6.1      21      44 ..     256     279 ..     226     289 .. 0.77
   2 !   10.2   0.0    0.0016      0.58      20      51 ..     529     562 ..     500     566 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.017
                 EEEEEESTTSSHHHHHHHHHHHTT CS
        TsaE  21 vilLeGdLGaGKTtlvrglakalg 44 
                  +l+ G+ G+GKT ++r++a++ g
  KHJ31255.1 256 GVLMFGPPGTGKTLMARAVANETG 279
                 3999***************99877 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0016
                 EEEEEEESTTSSHHHHHHHHHHHTT--..----T CS
        TsaE  20 dvilLeGdLGaGKTtlvrglakalgve..evkSP 51 
                 + +l++G+ G+GKT l++++a+++  +  +vk P
  KHJ31255.1 529 RGVLFYGPPGTGKTLLAKAVANECSANfiSVKGP 562
                 3599******************998877777766 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0    0.0075       2.6      20      41 ..     257     278 ..     235     317 .. 0.81
   2 !    8.3   0.0    0.0049       1.7      18      41 ..     529     552 ..     515     643 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0075
      AAA_11  20 tliqGPPGtgKTktivellsql 41 
                 +l+ GPPGtgKT +  ++ ++ 
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVANET 278
                 6899********8888777765 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0049
      AAA_11  18 eitliqGPPGtgKTktivellsql 41 
                   +l+ GPPGtgKT    ++ ++ 
  KHJ31255.1 529 RGVLFYGPPGTGKTLLAKAVANEC 552
                 45799*********7666666555 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.2       4.9   1.7e+03      49      97 ..      17      65 ..       3      91 .. 0.59
   2 !   10.0   0.0    0.0025      0.87       1      58 [.     260     318 ..     260     347 .. 0.68
   3 ?    7.7   0.0     0.013       4.6       1      26 [.     534     559 ..     534     607 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 4.9
                SHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-SEEEET.TEEEESSHHHHH CS
      AAA_17 49 lpleekkelqkeaaekiaeeakkkgvlvdghprikeq.agfldglpkevl 97
                ++  e+k ++++a  +i +++kk + l+ + + ++++   +l++ + e+l
  KHJ31255.1 17 ASGAEQKTIDATAT-AILKKKKKPNSLIVTDAINDDNsVIALSNNTMETL 65
                44456676676666.56555555555555555443330333444444444 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.0025
                 EE-TTSSHHHHHHHHHHHHT..EEEEEHHHHHHHHHHTTTSHSSHHHHCTSHHHHHHHHH CS
      AAA_17   1 lGgPGsGKgtqceklvekyg..fthlsaGdllreeakrgglakardemrklpleekkelq 58 
                 +G+PG GK+ +++ ++ + g  f  ++  +++ ++a ++++ + r+++++++++    + 
  KHJ31255.1 260 FGPPGTGKTLMARAVANETGafFFLINGPEIMSKMAGESES-NLRKAFEEAEKNSPAIIF 318
                 6***************9997535556666666677666654.567777766655555444 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.013
                 EE-TTSSHHHHHHHHHHHHTEEEEEH CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthlsa 26 
                 +G+PG GK+ +++ ++ +    ++s 
  KHJ31255.1 534 YGPPGTGKTLLAKAVANECSANFISV 559
                 7**************99987777764 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.013       4.4       6      45 ..     259     291 ..     255     341 .. 0.66
   2 !    9.1   0.0    0.0019      0.68       5      35 ..     532     555 ..     528     580 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.013
     DUF2075   6 VtGvaGtGKtvvllnllaeleddeeertavylsvNhplvl 45 
                   G +GtGKt+++ ++++e         a +++ N+p+++
  KHJ31255.1 259 MFGPPGTGKTLMARAVANET-------GAFFFLINGPEIM 291
                 5699*********9999998.......4445555554443 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0019
     DUF2075   5 lVtGvaGtGKtvvllnllaeleddeeertav 35 
                 l  G +GtGKt+++ ++++e+       +a+
  KHJ31255.1 532 LFYGPPGTGKTLLAKAVANEC-------SAN 555
                 6689****************9.......333 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.1    0.0094       3.3      21      40 ..     257     276 ..     244     280 .. 0.83
   2 !    7.9   0.0    0.0066       2.3      19      42 ..     529     552 ..     520     561 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0094
      AAA_30  21 avltGpAGtGKttalkalre 40 
                 +++ Gp+GtGKt + +a+++
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVAN 276
                 6778**********999865 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0066
      AAA_30  19 rvavltGpAGtGKttalkalreaw 42 
                 r ++  Gp+GtGKt + ka+++  
  KHJ31255.1 529 RGVLFYGPPGTGKTLLAKAVANEC 552
                 557788************998755 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.2     0.044        15      13      30 ..     257     274 ..     251     283 .. 0.81
   2 ?    6.6   0.0     0.026       9.1      10      34 ..     528     552 ..     523     569 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.044
      AAA_19  13 llvtaGpGtGKTrvlkhi 30 
                 +l+ ++pGtGKT + +++
  KHJ31255.1 257 VLMFGPPGTGKTLMARAV 274
                 7899********987766 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.026
      AAA_19  10 ekvllvtaGpGtGKTrvlkhivall 34 
                 ++ +l  ++pGtGKT + k++ +++
  KHJ31255.1 528 SRGVLFYGPPGTGKTLLAKAVANEC 552
                 6678899********9988877665 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.044        15      23      76 ..     257     304 ..     245     361 .. 0.63
   2 ?    6.0   0.0     0.029        10      23      44 ..     531     552 ..     522     560 .. 0.84
   3 ?   -1.6   0.0       5.9   2.1e+03     119     161 ..     585     637 ..     567     641 .. 0.71

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.044
    ATPase_2  23 yfiYGpegsGKtaLlkeiienledkdkyviyyialreesiskldefieeeeekk 76 
                 ++ +Gp g GKt + + ++++        +++i+  e+ ++ + e+  e++ +k
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVANETG----AFFFLINGPEIMSKMAGES--ESNLRK 304
                 6789*******988888888773....4677777777777666666..222222 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.029
    ATPase_2  23 yfiYGpegsGKtaLlkeiienl 44 
                 ++ YGp g GKt L k ++++ 
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANEC 552
                 678*************999875 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 5.9
    ATPase_2 119 k...iiiiiDelqklidlgln.........gaellvkeLlnliesltkekhlcvv 161
                      ++++Del  +   +++          +  +v++Ll+ ++  t++k+++v+
  KHJ31255.1 585 AaapCVVFLDELDSIA--KSRggsvgdaggASDRVVNQLLTEMDGMTSKKNVFVI 637
                 2334799999999999..7777778888766677888888888887777777665 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0    0.0041       1.4      24      83 ..     257     327 ..     251     333 .. 0.65
   2 ?    4.3   0.0      0.11        40      24      46 ..     531     553 ..     526     603 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0041
                      EEEEEETT--HHHHHHCC--TTS-EE--SS....TTHHHH-H..........HHHHHHTTTSEEEEEE-TT--H CS
  Sigma54_activ_2  24 vfltGekGsgkelvArlLhknsgpwleifv....verlaklp..........ldlleqakggtLylkdiadlsk 83 
                      v++ G++G+gk+l+Ar+ +++ g    + +    + +                +  e+ +++++++ +i+++ +
       KHJ31255.1 257 VLMFGPPGTGKTLMARAVANETGAFFFLINgpeiMSKM---AgesesnlrkaFEEAEKNSPAIIFIDEIDSIAP 327
                      999*****************999864433310003333...133334443333334445889999999988765 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.11
                      EEEEEETT--HHHHHHCC--TTS CS
  Sigma54_activ_2  24 vfltGekGsgkelvArlLhknsg 46 
                      v+  G++G+gk+l A++ +++ +
       KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANECS 553
                      8999************9988655 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0      0.17        60       3      71 ..     259     322 ..     257     326 .. 0.64
   2 !    9.6   0.0    0.0019      0.67       5      70 ..     535     595 ..     531     599 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.17
  Viral_helicase1   3 vhGvpGcGKStlirkllrts..liltvnrptaelltegkpklpnlsvrtvdsflmalvkstkgkililDEy 71 
                      + G pG GK+ + r ++++     + +n p  e+ ++ + +++++     ++f++a ++s    i+++DE+
       KHJ31255.1 259 MFGPPGTGKTLMARAVANETgaFFFLINGP--EIMSKMAGESESNLR---KAFEEAEKNS--PAIIFIDEI 322
                      5688***************77533333333..555555444444444...4445554444..569999997 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0019
  Viral_helicase1   5 GvpGcGKStlirkllrts.liltvnrptaelltegkpklpnlsvrtvdsflmalvkstkgkililDE 70 
                      G pG GK+ l + +++++  ++ +++   ell++++ +++++    +d++  a+ +     +++lDE
       KHJ31255.1 535 GPPGTGKTLLAKAVANECsANFISVKG-PELLSMWFGESESNIRDIFDKARAAAPC-----VVFLDE 595
                      78****************977777777.8*******99999999999999888765.....789998 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.082        29       3      23 ..     257     277 ..     255     280 .. 0.86
   2 ?   -1.6   0.0       6.1   2.2e+03      80     127 ..     312     362 ..     291     376 .. 0.62
   3 ?    7.7   0.0    0.0085         3       3      23 ..     531     551 ..     529     561 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.082
                 EEEEC-TTTCHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklala 23 
                 v++ G++G GKT +++ +a +
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVANE 277
                 7889***********999875 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 6.1
                 CCCEEEEEE-STT-SS-TCH............HHHHHCTTTTT--EEEEEE CS
       NACHT  80 perlLlilDglDelvtdlgq...kekqpvrtlLselirkkllpeasllltv 127
                    + + +D +D ++ + ++   + +++v   L +l+ +   +++ +++++
  KHJ31255.1 312 NSPAIIFIDEIDSIAPKRDKtngEVERRVVSQLLTLMDGMKARSNVVVMAA 362
                 445556689999998877777774444444444477777555555554444 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0085
                 EEEEC-TTTCHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklala 23 
                 v+  G++G GKT L++ +a +
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANE 551
                 7889************99987 PP

>> IPT  Isopentenyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0064       2.2       5      27 ..     258     280 ..     255     287 .. 0.92
   2 ?    4.5   0.0     0.054        19       5      31 ..     532     558 ..     529     560 .. 0.91

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0064
         IPT   5 lifGatttGKtaeaiklaketga 27 
                 l+fG+ +tGKt +a ++a+etga
  KHJ31255.1 258 LMFGPPGTGKTLMARAVANETGA 280
                 89*******************97 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.054
         IPT   5 lifGatttGKtaeaiklaketgapviv 31 
                 l +G+ +tGKt  a ++a+e +a  i+
  KHJ31255.1 532 LFYGPPGTGKTLLAKAVANECSANFIS 558
                 78******************9999887 PP

>> KAP_NTPase  KAP family P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0    0.0025      0.88     160     190 ..     298     330 ..     251     345 .. 0.76
   2 ?   -2.4   0.0       6.1   2.1e+03      23      47 ..     531     555 ..     525     588 .. 0.84
   3 ?    2.2   0.0      0.25        88     160     189 ..     575     603 ..     560     610 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0025
  KAP_NTPase 160 lladmektLda..lqkrlVvviDdLDrceteev 190
                   +++ k++++  ++++ +++iD++D++ +++ 
  KHJ31255.1 298 SESNLRKAFEEaeKNSPAIIFIDEIDSIAPKRD 330
                 334445555556679************999875 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 6.1
  KAP_NTPase  23 vgLygkWGsGKssllnkledelkef 47 
                 v  yg+ G+GK+ l + + +e + +
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANECSAN 555
                 5678999******999998887655 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.25
  KAP_NTPase 160 lladmektLdalqkrlVvviDdLDrcetee 189
                 ++ d++++ +a   + Vv++D+LD++ +++
  KHJ31255.1 575 NIRDIFDKARA-AAPCVVFLDELDSIAKSR 603
                 44555555555.8899*********98776 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.57     2e+02       3      21 ..     258     276 ..     256     280 .. 0.83
   2 ?    0.3   0.0       1.7   5.9e+02      85     108 ..     302     326 ..     293     359 .. 0.69
   3 ?    7.5   0.0      0.01       3.6       6      32 ..     535     561 ..     531     564 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.57
                 EEE--TTSSHHHHHHHHHH CS
    NTPase_1   3 fiTGppGvGKtTlvkkvle 21 
                 ++ GppG+GKt + + v++
  KHJ31255.1 258 LMFGPPGTGKTLMARAVAN 276
                 567********99998887 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 1.7
                 HHHHHHHHH.HHH-EEEE---STTG CS
    NTPase_1  85 alealrkal.seadviviDEiGkmE 108
                   +a+++a  +++ +i iDEi ++ 
  KHJ31255.1 302 LRKAFEEAEkNSPAIIFIDEIDSIA 326
                 34445555434445******97665 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.01
                 --TTSSHHHHHHHHHHHH...GGGEEE CS
    NTPase_1   6 GppGvGKtTlvkkvlellkssgvkvgG 32 
                 GppG+GKt l k v+++++ + ++v+G
  KHJ31255.1 535 GPPGTGKTLLAKAVANECSANFISVKG 561
                 9*****************998888888 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0      0.12        44      23      43 ..     257     277 ..     251     281 .. 0.87
   2 ?    7.5   0.0    0.0057         2      23      44 ..     531     552 ..     521     559 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.12
                 EEEEESTTSSHHHHHHHHCCS CS
      NB-ARC  23 valvGmgGvGKttlakqilnk 43 
                 v + G +G GKt +a+ + n+
  KHJ31255.1 257 VLMFGPPGTGKTLMARAVANE 277
                 5678************99987 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0057
                 EEEEESTTSSHHHHHHHHCCSH CS
      NB-ARC  23 valvGmgGvGKttlakqilnks 44 
                 v ++G +G GKt lak + n+ 
  KHJ31255.1 531 VLFYGPPGTGKTLLAKAVANEC 552
                 678***************9984 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.021       7.4      15      40 ..     253     278 ..     245     285 .. 0.89
   2 ?    4.5   0.0     0.051        18      20      50 ..     532     560 ..     526     567 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.021
  Zeta_toxin  15 rPklillgGqpGAGKselaellkdel 40 
                  P  +l+ G pG GK+ +a+++++e+
  KHJ31255.1 253 PPRGVLMFGPPGTGKTLMARAVANET 278
                 57889*****************9986 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.051
  Zeta_toxin  20 llgGqpGAGKselaellkdelerqgnvvrld 50 
                 l  G pG GK+ la+++++e     n++ ++
  KHJ31255.1 532 LFYGPPGTGKTLLAKAVANEC--SANFISVK 560
                 55699***************9..78888776 PP

>> eIF-1a  Translation initiation factor 1A / IF-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1       1.9   6.5e+02      44      50 ..      70      76 ..      52      99 .. 0.56
   2 ?   11.2   0.4   0.00072      0.25      29      53 ..      98     122 ..      83     131 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 1.9
                T-EEEEE CS
      eIF-1a 44 GdyVlVe 50
                Gd VlV+
  KHJ31255.1 70 GDTVLVK 76
                4444443 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00072
                 EEE-HHHHCT----TT-EEEEEE-T CS
      eIF-1a  29 aeipgkfRnkiwikrGdyVlVelsp 53 
                 a++++  R++ ++k Gd+V+V + p
  KHJ31255.1  98 ARMNRVVRHNLRVKHGDIVTVHPCP 122
                 899999***************9966 PP

>> UFD1  Ubiquitin fusion degradation protein UFD1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.88   3.1e+02      66      95 ..      50      79 ..      31      92 .. 0.75
   2 ?   10.2   0.0    0.0011      0.38      67     166 ..      94     198 ..      74     204 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.88
        UFD1 66 aeegtvylPewmmenlgleegdlveiesvs 95
                 ++  + l++  me+l+l  gd+v ++  +
  KHJ31255.1 50 DDNSVIALSNNTMETLQLFRGDTVLVKGKK 79
                4556788999**************999765 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0011
        UFD1  67 eegtvylPewmmenlgleegdlveie.svslpkgkfvklqpqsedfldi..sdpkavLekaLr.nfatLtkgdvieikyndkvyelkvlevkpes.avs 160
                 ++g+  + + + +nl++++gd+v+++   +++ +k + + p   +   +  s    +L   +r  +  + +gd ++++   +++e+kv+ev+p   ++ 
  KHJ31255.1  94 DDGSARMNRVVRHNLRVKHGDIVTVHpCPDIKYAKRIAVLPIADTVEGLtgSLFDVFLAPYFReAYRPVRQGDLFTVRGGMRQVEFKVVEVDPPVyGIV 192
                 789999999999**************4458999******998777665511667899******89***************************8655777 PP

        UFD1 161 iietdl 166
                   +t +
  KHJ31255.1 193 AQDTVI 198
                 777655 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0      0.12        42       5      26 ..     261     282 ..     257     287 .. 0.89
   2 ?    5.8   0.0     0.029        10       5      28 ..     535     558 ..     531     560 .. 0.92

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.12
                     -STTSSHHHHHHHHHHHHT-EE CS
  Cytidylate_kin   5 GPagsGKssvaralaeklglky 26 
                     GP g+GK  +ara+a++ g+ +
      KHJ31255.1 261 GPPGTGKTLMARAVANETGAFF 282
                     9***************998765 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.029
                     -STTSSHHHHHHHHHHHHT-EEEE CS
  Cytidylate_kin   5 GPagsGKssvaralaeklglkyld 28 
                     GP g+GK  +a+a+a++ ++++++
      KHJ31255.1 535 GPPGTGKTLLAKAVANECSANFIS 558
                     9******************99986 PP

>> Cytidylate_kin2  Cytidylate kinase-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0    0.0099       3.5       9     100 ..     264     359 ..     260     363 .. 0.77
   2 ?    2.8   0.0      0.33   1.2e+02       9      54 ..     538     583 ..     534     624 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0099
  Cytidylate_kin2   9 GsgGetigeaLAekLglpfy..dr.eiieevakelglseeev.eevdersrlssflskllaarvagdtldeklddelfeaqervirelaaeesv 98 
                      G+g++ +++a+A++ g  f+  +  ei+ ++a e++ +  ++ ee++++s++  f++++ +   + d+++ + + +++    +++  + a ++v
       KHJ31255.1 264 GTGKTLMARAVANETGAFFFliNGpEIMSKMAGESESNLRKAfEEAEKNSPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNV 357
                      99*************9776533556999999999999988888999999999999999988887777777777777776666666666644466 PP

  Cytidylate_kin2  99 Vi 100
                      V+
       KHJ31255.1 358 VV 359
                      66 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.33
  Cytidylate_kin2   9 GsgGetigeaLAekLglpfydreiieevakelglseeev.eevders 54 
                      G+g++ +++a+A++   +f++ + +e ++  +g se+ +   +d+ +
       KHJ31255.1 538 GTGKTLLAKAVANECSANFISVKGPELLSMWFGESESNIrDIFDK-A 583
                      9*********************99999999999999999444554.3 PP

>> Zot  Zonular occludens toxin (Zot)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0     0.033        12       4      63 ..     258     322 ..     257     335 .. 0.74
   2 ?    1.8   0.0      0.45   1.6e+02       4      17 ..     532     545 ..     531     599 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.033
         Zot   4 lvtGapGsgKtsg..avkkdllp..alkegRkiitnidGlrlerieqvlgekvs.tarliridnp 63 
                 l  G+pG+gKt+   av ++     +l +g +i+ ++ G    ++++ ++e+ + ++ +i+id+ 
  KHJ31255.1 258 LMFGPPGTGKTLMarAVANETGAffFLINGPEIMSKMAGESESNLRKAFEEAEKnSPAIIFIDEI 322
                 56799999999761156665555666779999999999999999999999888888999999833 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.45
         Zot   4 lvtGapGsgKtsga 17 
                 l++G+pG+gKt+ a
  KHJ31255.1 532 LFYGPPGTGKTLLA 545
                 899********865 PP

>> AAA_6  Hydrolytic ATP binding site of dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.024       8.4      34      69 ..     256     291 ..     248     298 .. 0.86
   2 ?    2.3   0.0      0.19        67      34      61 ..     530     557 ..     524     567 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.024
       AAA_6  34 ggapaGpagtGKtEtvkdLakalakqvvvfncsdql 69 
                 g  + Gp gtGKt   + +a++ + +++++n  + +
  KHJ31255.1 256 GVLMFGPPGTGKTLMARAVANETGAFFFLINGPEIM 291
                 55679**********************999977665 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.19
       AAA_6  34 ggapaGpagtGKtEtvkdLakalakqvv 61 
                 g   +Gp gtGKt   k +a++ +  ++
  KHJ31255.1 530 GVLFYGPPGTGKTLLAKAVANECSANFI 557
                 56678********998888887766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (820 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       678  (0.0378158); expected 358.6 (0.02)
Passed bias filter:                      609  (0.0339673); expected 358.6 (0.02)
Passed Vit filter:                        89  (0.00496402); expected 17.9 (0.001)
Passed Fwd filter:                        51  (0.00284455); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              51  [number of targets reported over threshold]
# CPU time: 0.86u 0.29s 00:00:01.14 Elapsed: 00:00:00.46
# Mc/sec: 5340.40
//
Query:       KHJ31256.1  [L=503]
Description: putative nadh-ubiquinone oxidoreductase 51 kda subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-46  158.5   0.0    1.9e-46  157.7   0.0    1.4  1  Complex1_51K  Respiratory-chain NADH dehydrogenase 51 Kd subu
    6.5e-29   99.8   0.5    1.6e-28   98.6   0.1    1.9  2  NADH_4Fe-4S   NADH-ubiquinone oxidoreductase-F iron-sulfur bi
    2.3e-09   37.0   0.0    4.6e-09   36.0   0.0    1.5  1  SLBB          SLBB domain


Domain annotation for each model (and alignments):
>> Complex1_51K  Respiratory-chain NADH dehydrogenase 51 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.7   0.0   3.1e-50   1.9e-46       1     149 [.      99     272 ..      99     275 .. 0.95

  Alignments for each domain:
  == domain 1  score: 157.7 bits;  conditional E-value: 3.1e-50
  Complex1_51K   1 vkeagivGrGGagfPthvKlkakakkkk......kylivNaaEcEPgltkDrllmreepheileGlkiaaealgaekgvigvrdekpeaiealekal 91 
                   +k++g++GrGGagfP+++K+++++ k+       +yl++Na+E+EPg++kDr +mr++ph+++eG+ +a +a++++ ++i++r+e  ++++ leka+
    KHJ31256.1  99 IKASGLRGRGGAGFPSGMKWSFMNFKDWdkdnkpRYLVINADEGEPGTCKDREIMRKDPHKLIEGCLVAGRAMNCSAAYIYIRGEFIQECKVLEKAI 195
                   799*******************987443678889*************************************************************** PP

  Complex1_51K  92 aeakaagl...........ldievvklagkYpaGeekaLiesltgr.evprgkpp..advgv.....vvnNveTlaa 149
                   +ea+++gl           +d+ ++++ g+Y++Gee+ Liesl+g+ + pr kpp  a vg+     +v NveT+a 
    KHJ31256.1 196 SEAYSDGLigknacgsgydFDVFIHRGMGAYVCGEETSLIESLEGKpGKPRLKPPfpASVGLfgcptTVANVETVAV 272
                   *******************************************************8888888************985 PP

>> NADH_4Fe-4S  NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.5   8.9e+03      19      29 ..     275     285 ..     275     292 .. 0.83
   2 !   98.6   0.1   2.7e-32   1.6e-28       3      84 ..     389     470 ..     387     471 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.5
                  HHHHIIIIHHH CS
  NADH_4Fe-4S  19 tpCreGtkrll 29 
                  t Cr G  +  
   KHJ31256.1 275 TICRRGASWFS 285
                  67****99975 PP

  == domain 2  score: 98.6 bits;  conditional E-value: 2.7e-32
                  HHHHHHHHHHH--S--HHHHIIIIHHHHHHHHHTBT---HHHHHHHHHHHHHHSS--SSTHHHHHHHHHHHHHHHHHHHHHH CS
  NADH_4Fe-4S   3 arrllefyaaesCGkCtpCreGtkrllelleriaagegteedldlleelaetikgtslCalgdsaanpvlsalrkFreefea 84 
                  + rl +fy++esCG+CtpCreG+k+ +++++r+++g+g+++++d+l+el+++++g+++Calg++  +p++ ++r+Fr e+ea
   KHJ31256.1 389 ISRLSHFYRHESCGQCTPCREGSKWTEQIMKRFEKGQGKPREIDMLQELTKQVEGHTICALGEAFSWPIQGLIRHFRPELEA 470
                  67899**************************************************************************997 PP

>> SLBB  SLBB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0   7.6e-13   4.6e-09       2      57 ..     298     348 ..     297     349 .. 0.91

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 7.6e-13
                 EEEESSBSS-EEEEEETT-BHHHHHHTTT-SBSS.........-E.EEE-SSSSS-- CS
        SLBB   2 VtVtGeVkrPgnyevpigttlsdlieqaGGltddadlksvnLarl.avipgGpmmgi 57 
                 ++++G+V++P+++e  + ++l++lie+++G+ + ++        l a+ipgG+++++
  KHJ31256.1 298 FCISGHVNNPCTVEEEMSIPLRELIEKHCGGVRGGWD------NLkAIIPGGSSTPV 348
                 79*************************8888888773......7889*******998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (503 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       452  (0.0252106); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3597.22
//
Query:       KHJ31257.1  [L=173]
Description: hypothetical protein EV44_g2431 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.089   13.2   0.0       0.16   12.4   0.0    1.5  1  RbsD_FucU  RbsD / FucU transport protein family


Domain annotation for each model (and alignments):
>> RbsD_FucU  RbsD / FucU transport protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   8.9e-06      0.16      42      93 ..      73     123 ..      58     149 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8.9e-06
                 .-CBTTBS-HHHHHHHHHCTS-EEEEEEETCHHHHTHHHHHHHHHHCCCCCC CS
   RbsD_FucU  42 lalragvpsfldvleavlselpvekvivaeevkeenpevleelkellakaee 93 
                 l  + +  +f +vle vl+++ v+ +++a+   +  p++ ++++++ +k++e
  KHJ31257.1  73 LLRNGECTTFHEVLERVLEDIHVD-TVIARSSTDPTPHLSSNVHSVGEKKSE 123
                 444556789***************.777777766667777777666665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1236.87
//
Query:       KHJ31258.1  [L=165]
Description: putative powdery mildew-specific hypothetical protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.1e-07   29.7   0.1    8.6e-07   28.7   0.0    1.6  2  Retrotran_gag_2  gag-polypeptide of LTR copia-type
  ------ inclusion threshold ------
      0.023   14.2   0.1       0.09   12.2   0.1    1.7  2  NA37             37-kD nucleoid-associated bacterial protein
       0.09   11.8   0.2       0.18   10.8   0.2    1.5  1  TelA             Toxic anion resistance protein (TelA)
       0.22   11.7   2.4       0.33   11.1   2.4    1.3  1  zf-CCHC          Zinc knuckle


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   1.9e-10   8.6e-07      33      85 ..       1      53 [.       1      70 [. 0.96
   2 ?   -2.2   0.0      0.66     3e+03      70      88 ..      90     108 ..      82     120 .. 0.57

  Alignments for each domain:
  == domain 1  score: 28.7 bits;  conditional E-value: 1.9e-10
  Retrotran_gag_2 33 vWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsalg 85
                     +W  L + ++ +saa    l++++  + m+eg++v ++ n+l++l +++++l+
       KHJ31258.1  1 MWVGLSNYFQPQSAAAVDVLLEEFWGFTMSEGTDVDEYANNLTQLQSQIASLD 53
                     8***********************************************99886 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.66
  Retrotran_gag_2  70 hinkleelvneLsalgvki 88 
                      h  ++ e+vn L++   + 
       KHJ31258.1  90 HTINFAETVNMLRENQRNY 108
                      4555555555555444443 PP

>> NA37  37-kD nucleoid-associated bacterial protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.03   1.3e+02     214     280 ..       6      78 ..       4      81 .. 0.61
   2 ?   12.2   0.1     2e-05      0.09     100     148 ..      70     122 ..      55     144 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.03
        NA37 214 veylkeqleegesvdleel....aeelfkdnpee....kefvkeeeeyeleeefpvdk.ekklkklkkfigsgigi 280
                 ++y++ q ++  +v lee+     +e  +  ++e       +++ +   l+++ ++++ +kk + lk+f g+g g+
  KHJ31258.1   6 SNYFQPQSAAAVDVLLEEFwgftMSEGTD--VDEyannLTQLQS-QIASLDPSKRPSSlTKKNRLLKHFEGEGNGF 78 
                 57888888888888888885544222222..1111123334444.5555666666666999999999999999886 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 2e-05
        NA37 100 hyeseatdy....iailkseykkafthnleleedkhldlqkldkaarInltew 148
                 h+e e++ +    + +lk++++++f +++++ ++++ + +k +++a +nl + 
  KHJ31258.1  70 HFEGEGNGFyggtVSFLKLNHTINFAETVNMLRENQRNYKKQNQVAVVNLAKP 122
                 6666765555777999**********************************775 PP

>> TelA  Toxic anion resistance protein (TelA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2     4e-05      0.18      29     115 ..      15     111 ..       9     115 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 4e-05
        TelA  29 kfsdrlLe......svktkdlgevgklLseLvkelkeldpdelkee..kklgllplfkkaknkieklfakYekaeeqid..kIvkeLekgqdellkd 115
                 ++ d lLe      + + +d++e +++L++L  ++ +ldp++   +  kk  ll+ f+  +n     + ++ k++  i+  + v+ L+++q++ +k 
  KHJ31258.1  15 AAVDVLLEefwgftMSEGTDVDEYANNLTQLQSQIASLDPSKRPSSltKKNRLLKHFEGEGNGFYGGTVSFLKLNHTINfaETVNMLRENQRNYKKQ 111
                 4556677777777778899*********************987555765557777777666666666666666666554334555555555555555 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   2.4   7.3e-05      0.33       2      17 ..     133     148 ..     132     149 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.3e-05
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                  C +CG++ Hi   C 
  KHJ31258.1 133 NCAYCGRTNHIRDSCF 148
                 7***********9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1053  (0.0587317); expected 358.6 (0.02)
Passed bias filter:                      796  (0.0443973); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1195.18
//
Query:       KHJ31259.1  [L=278]
Description: putative proteasome component pre2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-46  157.0   0.1    4.4e-46  156.8   0.1    1.1  1  Proteasome  Proteasome subunit


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.8   0.1   2.5e-50   4.4e-46       1     190 []      59     242 ..      59     242 .. 0.94

  Alignments for each domain:
  == domain 1  score: 156.8 bits;  conditional E-value: 2.5e-50
                 HHHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHC CS
  Proteasome   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrs 99 
                 +++Gtt++++++++g+++ +d+ratags + +++tv+K+++i++ ++ ++aG aaD++ +  +++++++l++lr++ +i+v      +a+k++a+  ++
  KHJ31259.1  59 IAHGTTTLAFRFQGGIIVTTDSRATAGSWI-ASQTVKKVIEINNCLLGTMAGGAADCQFWLAFLSQQCRLHELRHKNRISVA-----AASKILANKIYE 151
                 579***************************.7777***********************************************.....888888777777 PP

                 TTTTT.SEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEEE CS
  Proteasome 100 grrpf.gvslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeavelavkalkealerdklsgknievavi 190
                 ++++   ++++iagv   +gp Ly+id +G+ ++  + +++Gsg+++a+++l++ey+ dl++eea+el  +++ +a++rd++sg+ i++++i
  KHJ31259.1 152 YKGMGlSMGTMIAGVTPSEGPALYYIDSDGTRLSG-NLFCVGSGQTFAYGVLDAEYRYDLSEEEALELGSRSILAATHRDAYSGGFINLYHI 242
                 77665169********9999***************.7**************************************************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       300  (0.0167327); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 2134.79
//
Query:       KHJ31260.1  [L=347]
Description: putative rnp domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.2e-17   61.2   0.0    1.2e-16   60.3   0.0    1.5  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.3   0.0   6.6e-21   1.2e-16       1      69 [.     222     291 ..     222     292 .. 0.98

  Alignments for each domain:
  == domain 1  score: 60.3 bits;  conditional E-value: 6.6e-21
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 lfVgnL+ +vt+e L++ Fs + ++++++++rd +t kskg++fV F + ++  +A + ++gk +g++++
  KHJ31260.1 222 LFVGNLAGEVTDESLYKAFSRWPSVQKARVIRDkRTTKSKGYGFVSFSDGDEFFQAARDMQGKYIGSHPV 291
                 8*****************************************************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       547  (0.0305092); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2592.72
//
Query:       KHJ31261.1  [L=588]
Description: putative methionyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-96  323.8   0.2    4.5e-95  318.7   0.2    2.1  1  tRNA-synt_1g  tRNA synthetases class I (M)
    1.8e-22   79.3   0.5    3.6e-12   45.4   0.0    3.3  3  tRNA-synt_1   tRNA synthetases class I (I, L, M and V)
    3.9e-10   39.6   0.1    0.00015   21.3   0.1    2.2  2  tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
     0.0078   16.2   0.1      0.025   14.5   0.1    1.8  1  Anticodon_1   Anticodon-binding domain of tRNA


Domain annotation for each model (and alignments):
>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  318.7   0.2     1e-98   4.5e-95       1     390 [.      52     418 ..      52     419 .. 0.90

  Alignments for each domain:
  == domain 1  score: 318.7 bits;  conditional E-value: 1e-98
                   EEEEE--B--SS---HHHHHHHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHTT---SEEEETTSHHHH CS
  tRNA-synt_1g   1 vlvttalpYangklHlGhllevisaDifaRykrlrgeevlfvcgtDehGtpielkAekegvtpeelvekvheeikelfkklnisfdkygrttseehk 97 
                   +++tt+++Y+n+++H+Ghl++++ aDi+ R++ l+g++ + ++gtDehG+++  +Ae++  tp+++++ ++ ++k l ++ nis d+++rtt+++hk
    KHJ31261.1  52 YYITTPIFYVNDSPHIGHLYSMVYADILKRWQVLKGKQAILCTGTDEHGMKVLRAAENASKTPKDYCDLMSGTFKMLASRANISSDHFIRTTDSSHK 148
                   69*********************************************************************************************** PP

                   HHHHHHHHHHHHTT-EEEEEEEEEEETTTTEEE-GGG-EE.........-TTS-EE-TTSSB-E................EEE.EEEEEE-GGGGHH CS
  tRNA-synt_1g  98 elvqeifkklkekgliyekeieqlycpkderflpdryvegtC.Pkckseeargdqceecgkkleptelinpksaisgskpevketehlffklskfek 193
                   ++vq++++ lkek++iye++ +++yc++de+f+p+  +e    P               g+ +         s+ +g++ e+ +++++ f+ls+f++
    KHJ31261.1 149 DAVQHFWTVLKEKNFIYESDHQGWYCVSDETFYPETAIEKRIdPF-------------TGRDFM-------ASKETGKEVEYVKERNYHFRLSEFKE 225
                   *************************************97744122.............233333.......3334455555666************* PP

                   HHHHHH.HH-TT..SHHHHHHHH.HHHHT----EE-E...SS-SSS-EETTECCEEE-HHHHHHHHHHHTTTTT-...TTSGGGG.G--S......E CS
  tRNA-synt_1g 194 klkewieeeeke..leenvkkivkewlkegLkdlais...rdldwGipvPgaekkvlYVWldAligYisatkelakkkgeeekwkeyWakdkevelv 285
                    l +++ +e+++   +++  k + + +++gL+dl++s    +++wGi+vP ++++++YVW+dAli+Yi+++k+     + +++   + a+       
    KHJ31261.1 226 PLLKFY-KENPDfvVPSQRMKDIVAAVSSGLEDLSVSrpaDRASWGIRVPHDDSQTIYVWFDALINYITSVKYPW--PPGQQSIGGWPAD------L 313
                   ******.66666695555555566899**********5555789*****************************99..3445555555544......9 PP

                   EEEEGGGHHHHHTHHHHHHHHTT----S-EEEE--EEE--------------HHHHHHHH-HHHHHHHHHHHS-TTS-EEE-HHHHHHHHHHHCCCH CS
  tRNA-synt_1g 286 hfigkdiikFHtifwPaillgaelklpkkvvaheyltvegkKlSkSrgvvvkakealerldadllRYylaaeapekkDldfswedfvervNseLadk 382
                   h+igkdi++FH+i+wPa++l+a+lk pk++ +h+++t++ +K+SkS g+vv +  a++r+ +d++RYyl++++   +D+d+  + +v r+ + L + 
    KHJ31261.1 314 HVIGKDILRFHCIYWPAFVLAAGLKPPKQILSHSHWTMRKQKMSKSIGNVVNPFFAIDRFGVDAIRYYLVYDGAMLNDSDYGNQAVVTRYKKGLQGG 410
                   ************************************************************************************************* PP

                   HHHHHHHH CS
  tRNA-synt_1g 383 lgnlvnRv 390
                   lgnl+ R+
    KHJ31261.1 411 LGNLLFRI 418
                   ****9986 PP

>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.1   3.8e-11   1.7e-07      19      83 ..      46     110 ..      31     189 .. 0.88
   2 ?    0.2   0.0     0.037   1.7e+02     366     432 ..     202     274 ..     196     277 .. 0.80
   3 !   45.4   0.0     8e-16   3.6e-12     482     592 ..     276     384 ..     226     393 .. 0.84

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 3.8e-11
  tRNA-synt_1  19 ekekkefilvdgPPyvtGslHiGhalaktlkdivirykrmkGkevlyvpGwDhaGlaieakvekk 83 
                  e+  k++ ++ +  yv+ s+HiGh +  +  di+ r++ +kGk++   +G+D +G+ +  + e+ 
   KHJ31261.1  46 EEAGKPYYITTPIFYVNDSPHIGHLYSMVYADILKRWQVLKGKQAILCTGTDEHGMKVLRAAENA 110
                  3447889*************************************************997777665 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.037
  tRNA-synt_1 366 erskkpiiyrateqWfvrvkeladaalkave.kvqfv.pkskekryaswle.niqdWciSR...qrwWGhrip 432
                  + ++k ++y     ++ r++e+++ +lk  + +  fv p ++ k +   +    +d  +SR      WG r+p
   KHJ31261.1 202 KETGKEVEYVKERNYHFRLSEFKEPLLKFYKeNPDFVvPSQRMKDIVAAVSsGLEDLSVSRpadRASWGIRVP 274
                  678999**********************999767775266677777776651689******543357999998 PP

  == domain 3  score: 45.4 bits;  conditional E-value: 8e-16
  tRNA-synt_1 482 kdedvlDvWFsSgswpfstlgypeedteelkkffpadmlleGlDiirgWvarlillslaltgsePfkevlvhglvrdeeGrKmSKslgNvidpldvik 579
                   d++++ vWF+     +++++yp    ++    +pad+ + G Di+r+       + la  g +P k++l h+  +  + +KmSKs+gNv++p   i+
   KHJ31261.1 276 DDSQTIYVWFDALINYITSVKYPWPPGQQSIGGWPADLHVIGKDILRFHCIYWPAFVLA-AGLKPPKQILSHSHWTMRK-QKMSKSIGNVVNPFFAID 371
                  5678889****************998788888****************98887777666.577899*******887655.9***************** PP

  tRNA-synt_1 580 kygadalRltlil 592
                  + g+da+R++l++
   KHJ31261.1 372 RFGVDAIRYYLVY 384
                  ***********95 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.1   3.3e-08   0.00015      19     142 ..      61     184 ..      44     221 .. 0.84
   2 !   16.1   0.0   1.2e-06    0.0056     209     281 ..     312     383 ..     304     400 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 3.3e-08
                   TTS--BHHHHHHHHHHHHHHHHHHHTT-EEEEEEEBB--SHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHTT----SB.--BGGGGHHHHHHHHHH CS
  tRNA-synt_1e  19 vydashlGhaRslvafDilrrilqalgYdvqfvqnvtDidDkiikrareeeksvkelaekfieefkkdleaLnvlkptl.eprvsekvdeiielvek 114
                   v d  h+Gh  s+v  Dil+r+   +g +  +     +   k+++ a++++k+ k+ ++ +   fk   +  n+   ++ ++  s + d++ ++   
    KHJ31261.1  61 VNDSPHIGHLYSMVYADILKRWQVLKGKQAILCTGTDEHGMKVLRAAENASKTPKDYCDLMSGTFKMLASRANISSDHFiRTTDSSHKDAVQHFWTV 157
                   7799******************999**99999998888889*********************************9865415666788999******* PP

                   HHHTTSEEE-TTS-EEE-GGG-TTTTTT CS
  tRNA-synt_1e 115 liekgyaYavsdgdvyfdvskkeeYgkl 142
                   l ek++ Y+++  +  + vs++  Y + 
    KHJ31261.1 158 LKEKNFIYESD-HQGWYCVSDETFYPET 184
                   *********99.5566666667777654 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 1.2e-06
                   EEEEEEGGGTTTHHHHHHHHHHHHSSS--EEEEEEE--EEETTBE--TTTT---BHHHHHTTS-HHHHHHHHH CS
  tRNA-synt_1e 209 dihsGGiDLafPhhenelaqseaafdkqlvkyflhnghlkiegekmsksLknfitikdvlkkfdprqlRllll 281
                   d+h+ G+D++  h     a   aa  k+  ++  h  h ++ ++kmsks++n++    ++ +f   ++R++l+
    KHJ31261.1 312 DLHVIGKDILRFHCIYWPAFVLAAGLKPPKQILSH-SHWTMRKQKMSKSIGNVVNPFFAIDRFGVDAIRYYLV 383
                   66666666666666666666555555555555445.57789*****************************997 PP

>> Anticodon_1  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.1   5.6e-06     0.025      10      89 ..     455     545 ..     447     566 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 5.6e-06
  Anticodon_1  10 klvkevteayeeyrfnkaasalyeffwndlcdwylelvkprlysesaedk.......raaq........evllevletllrllaPfmPfitEelw 89 
                   l  ev+ +++++++ ka++++++ + +  +++y+  ++p++ ++            +  +        +++ e l+   +ll+Pf+P  + el 
   KHJ31261.1 455 TLSDEVNHHFDQLEIGKALQSIMTAVFK--ANTYFHNTQPWMLTKYFITFkdlenrsD--SlkpleesiYNCMETLRICGILLQPFIPNKATELL 545
                  67789*******************8776..79*********98865322234444331..034566666888888888889*******9999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       451  (0.0251548); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.24s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4134.50
//
Query:       KHJ31262.1  [L=499]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       754  (0.0420548); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3503.23
//
Query:       KHJ31263.1  [L=762]
Description: putative urease accessory protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.1e-37  126.6   6.1    7.1e-37  126.6   6.1    3.6  4  Cut12     Spindle pole body formation-associated protein


Domain annotation for each model (and alignments):
>> Cut12  Spindle pole body formation-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.6   6.1   3.9e-41   7.1e-37       7     134 ..     182     309 ..     178     318 .. 0.84
   2 ?   -2.9   0.3      0.34   6.1e+03      82      99 ..     331     348 ..     325     353 .. 0.69
   3 ?   -2.4   0.6      0.24   4.3e+03      96     118 ..     393     411 ..     369     449 .. 0.59
   4 ?    0.4   3.0     0.032   5.7e+02       4      47 ..     461     507 ..     458     522 .. 0.45

  Alignments for each domain:
  == domain 1  score: 126.6 bits;  conditional E-value: 3.9e-41
       Cut12   7 kltqalldarekkkskeeekaekkee.kkesedeeeekdeseeedeeDvTidLnePrSqSGkYWkseFesyrsdaelEieklikyrslaksyakkKdee 104
                 +lt++ ld +++k+  e++++   e+ + +++d+e+++d++ +ede D+T+dLn P+S SGkYWkseFe+y+++a+lE++kl+ y++laks+a+ Kde 
  KHJ31263.1 182 ELTESQLDISSNKNDVEKTRRVV-ERlEIDNQDDEDDEDDKADEDEGDTTLDLNRPHSLSGKYWKSEFENYHKEAKLEMRKLLSYKELAKSFARIKDER 279
                 67888888777776333333332.3334444445666899999******************************************************** PP

       Cut12 105 alrlkeklkeEeekvaemekkvselaskvv 134
                  ++l+ klkeE++kv +me+ +s+l++++ 
  KHJ31263.1 280 SINLAGKLKEEQRKVIAMEETISRLSANLQ 309
                 ************************998865 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.34
       Cut12  82 lEieklikyrslaksyak 99 
                 +   ++i+y++ ++++ k
  KHJ31263.1 331 RQTARVIQYKEQVEEFRK 348
                 445677888888877755 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 0.24
       Cut12  96 syakkKdeealrlkeklkeEeek 118
                 +y  +K ++++++k    eE+ek
  KHJ31263.1 393 KYLSQKLQDIVFFK----EENEK 411
                 33333333333332....23333 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.032
       Cut12   4 krskltqalldarekkkskeeekaekk...eekkesedeeee.kdese 47 
                 +r++++q+l ++   +k ++++  ++k   +e+++++++e+   ++++
  KHJ31263.1 461 NRNRISQKLQNSELDHK-ESKNLYKQKkivKENQSTNNHESPmYKKNQ 507
                 67788888888877664.222222222122222222222222222333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (762 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1884  (0.105081); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.28s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 5151.92
//
Query:       KHJ31264.1  [L=398]
Description: putative fungal protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       950  (0.0529868); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2758.13
//
Query:       KHJ31265.1  [L=132]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1046.21
//
Query:       KHJ31266.1  [L=312]
Description: hypothetical protein EV44_g4120 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       690  (0.0384851); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.21s 00:00:00.64 Elapsed: 00:00:00.36
# Mc/sec: 2574.36
//
Query:       KHJ31267.1  [L=843]
Description: putative minus-end-directed microtubule motor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
     9e-105  350.3   3.4     9e-105  350.3   3.4    2.5  2  Kinesin      Kinesin motor domain
    2.3e-56  189.9   1.8      7e-56  188.3   0.5    2.6  2  Microtub_bd  Microtubule binding
  ------ inclusion threshold ------
      0.028   14.8   1.1      0.076   13.4   0.0    2.3  3  AAA_16       AAA ATPase domain
        0.1   12.3   0.6        3.8    7.2   0.0    2.4  2  AAA_30       AAA domain
        0.7   10.2   0.0        0.7   10.2   0.0    2.9  3  AAA_22       AAA domain


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.5   8.3         2   7.3e+03     126     224 ..     203     302 ..     181     330 .. 0.75
   2 !  350.3   3.4  2.5e-108    9e-105       1     332 [.     505     832 ..     505     833 .. 0.92

  Alignments for each domain:
  == domain 1  score: -4.5 bits;  conditional E-value: 2
                 EEEEEEEEEETTEEEETTSTTT..TSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTSTTSSCTSHHCCSEEEEEEEEEEEETTTT CS
     Kinesin 126 svkvsylEiYneeiyDLLeskk..skkkkklkiredskkgevyvkgltevevksaeevlellekgeknrkvaetklneeSSRSHavftitleqknlkee 222
                 +++v++lE+  e+i D   +kk  ++++ +lk r+ + + + y  + +++ ++s  ++++  ++ ++++++ +t+  +e  RSH++   +++++n++e 
  KHJ31267.1 203 NMEVQFLEM-RETIKDASIDKKslEESMITLKARNTELEANKYQLETSNRMLQSEIDLIRQKAEVSQKQHIDATNTLHEHIRSHQLEIEEIRRQNRHEV 300
                 455566664.67777765444445555558888888777777777888889999999999999999******************988888888877655 PP

                 TC CS
     Kinesin 223 te 224
                 ++
  KHJ31267.1 301 EK 302
                 44 PP

  == domain 2  score: 350.3 bits;  conditional E-value: 2.5e-108
                 EE-SSSHHHHTTTTEBCEEEEC......TCTCEEEEEEEEECTTSCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHT CS
     Kinesin   1 RvRplnekekeeeeeeevevee......ekkeeekkskkenkeeeekkfkFdkvfdeeatqeevyeetakplvesvleGynatifaYGqtgsGKTyTme 93 
                 RvRp+ ++ + + ++ +++  +      e   +e+ks + n +++++ f+Fd+vf++e++++ev+ee+ ++l++s+l+Gyn++if+YGqtgsGKT+Tm+
  KHJ31267.1 505 RVRPILNDIEGDAAKFKITDADkeskelEVIGKEEKSFTGNITRKKHYFTFDRVFGPESQNQEVFEEI-SQLIQSALDGYNVCIFCYGQTGSGKTHTMS 602
                 6777666655555554444433344444444566677778889999*********************5.****************************** PP

                 BCTTTSBSHHHHHHHHHHHHHHHCTTTHEEEEEEEEEEEEEETTEEEETTSTTTTSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHH CS
     Kinesin  94 gkeeeeeGiipraleelFesikkekeekekefsvkvsylEiYneeiyDLLeskkskkkkklkiredskkgevyvkgltevevksaeevlellekgeknr 192
                       +G+ipra+++++e+ ++ ke+  + +++k +++E+Yneei+DLL+++k+ +kkk +ir+d+++++++v+gl++v ++s + v  +le++++nr
  KHJ31267.1 603 SP----DGMIPRATKQIYETATNLKEK-GWVYNMKGNFVEVYNEEIHDLLTDSKEFDKKKHEIRHDDERKQTIVTGLNTVALDSPSSVEIMLERAAANR 696
                 97....7***************99988.9************************9999999*************************************** PP

                 TSTTSSCTSHHCCSEEEEEEEEEEEETTTTTCEEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTSTSCGGGSHHH CS
     Kinesin 193 kvaetklneeSSRSHavftitleqknlkeeteekvkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaekkkskhipYRdSkLT 291
                 +va+tk ne+SSRSH+vf++++  +n++++++     ++lnLvDLAGsEr++++g aeg+r+kE+++iNkSL++Lg+vi aL + k  +hipYR+SkLT
  KHJ31267.1 697 SVASTKSNERSSRSHSVFMLKIMGQNTSNNES---CEGTLNLVDLAGSERLKQSG-AEGDRMKETQSINKSLSCLGDVIGALGQGKGGAHIPYRNSKLT 791
                 **************************997666...89******************.58***************************************** PP

                 HHTGGGHSSSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHCT CS
     Kinesin 292 rlLqdsLgGnsktlmivtvspssenleetlstlkfaerake 332
                  lLq sLgGnsktlm+v+ sp + +l+et+s+lkfa+++++
  KHJ31267.1 792 YLLQYSLGGNSKTLMFVMASPLEAHLSETISSLKFATKVHN 832
                 *************************************9986 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0         1   3.7e+03      14      42 ..      36      65 ..      28      84 .. 0.67
   2 !  188.3   0.5   1.9e-59     7e-56       2     149 .]     480     647 ..     479     647 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1
                 HHHHHCTB-EEEEEEECCCS-.T.EEEETT CS
  Microtub_bd 14 tiqelkGniRvfarvrpeles.ekakikfp 42
                 ++ + + niR+  + +p +++ ++  i+ +
   KHJ31267.1 36 EVSDSQSNIRCKQNSSPAKSNlKHKMISLH 65
                 688899999998888888777444444444 PP

  == domain 2  score: 188.3 bits;  conditional E-value: 1.9e-59
                  HHHHHHHHHCHHHHHHHCTB-EEEEEEECCCS-.T...EEEETTT.......................TTTEEEE-SEEEECTTHCCCCCCCCHHHHH CS
  Microtub_bd   2 ekeetlRrkleNtiqelkGniRvfarvrpeles.ek..akikfpe....................eekkkkkefsFdrvfeseseqeevfeeisqlvq 76 
                   kee+lRr l+N++qelkGniRv++rvrp l++ e   ak+k+++                    ++++kk+ f+Fdrvf +es+++evfeeisql+q
   KHJ31267.1 480 VKEESLRRILFNQVQELKGNIRVMCRVRPILNDiEGdaAKFKITDadkeskelevigkeeksftgNITRKKHYFTFDRVFGPESQNQEVFEEISQLIQ 577
                  589**************************999965566555555344566778888999999**9999****************************** PP

                  HHHTT--EEEEEEES................ST-HCHHHHHHHHHHCCTSCCCCEEEEEEEEEEESS-EEETT CS
  Microtub_bd  77 saldgynvcifaygqTGsGKtyTmegeeeeagmipraveeifetiselkekgwkyeielqfveiynekvqDlL 149
                  saldgynvcif+ygqTGsGKt+Tm++    +gmipra+++i+et+++lkekgw y+++++fve+yne+++DlL
   KHJ31267.1 578 SALDGYNVCIFCYGQTGSGKTHTMSS---PDGMIPRATKQIYETATNLKEKGWVYNMKGNFVEVYNEEIHDLL 647
                  **************************...99*****************************************8 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.3       1.3   4.7e+03      78      78 ..     318     318 ..     223     383 .. 0.61
   2 ?   -2.9   0.0       2.2   7.7e+03      89     108 ..     453     472 ..     419     510 .. 0.54
   3 ?   13.4   0.0   2.1e-05     0.076      10      89 ..     570     655 ..     566     714 .. 0.57

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.3
      AAA_16  78 r 78 
                 +
  KHJ31267.1 318 N 318
                 1 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.2
      AAA_16  89 aesaeleawrekleealaav 108
                 a+s+++++   +le+al+++
  KHJ31267.1 453 AQSDSFAEMESRLEKALNSA 472
                 33334444444444444422 PP

  == domain 3  score: 13.4 bits;  conditional E-value: 2.1e-05
      AAA_16  10 eqLlsalervrsgrpelvllsGesGvGKsslv....rellralekdggiflrgkcdql.esaipy..sa.laqalareellrqllde.....a 89 
                 e++ ++++++ +g   +++++G+ G+GK+  +     +++ +++k+    ++++++ l e++  y     ++++  + e + +ll++     +
  KHJ31267.1 570 EEISQLIQSALDGYNVCIFCYGQTGSGKTHTMsspdGMIP-RATKQ----IYETATNLkEKGWVYnmKGnFVEVY-N-EEIHDLLTDskefdK 655
                 556677777778888***************9944433344.45555....4444444422222222223344445.4.344444444333333 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   1.6     0.059   2.1e+02     127     183 ..     268     316 ..     261     328 .. 0.63
   2 ?    7.2   0.0    0.0011       3.8       8      55 ..     574     621 ..     570     671 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.059
      AAA_30 127 QlasVeaGgvlrdlveaagigtaeLtevvRqkeseeraaalalregdaeealealad 183
                 Q + ++a ++l++ +   + ++ e++e++Rq++    + ++++r+++a+  +++l++
  KHJ31267.1 268 QKQHIDATNTLHEHI---RSHQLEIEEIRRQNR----HEVEKIRRDNAD-EIDRLSR 316
                 666666666666665...46889999*****54....445555555554.4444443 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0011
      AAA_30   8 aavealltsgdrvavltGpAGtGKttalkalreaweaaggrviglApt 55 
                 ++++++l + + + +  G  G+GKt+++++   ++ +a +++   A +
  KHJ31267.1 574 QLIQSALDGYNVCIFCYGQTGSGKTHTMSSPDGMIPRATKQIYETATN 621
                 6788889999999999*************9999998888888777765 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.5      0.59   2.1e+03      97     112 ..     308     325 ..     237     348 .. 0.67
   2 ?   -2.0   0.2       1.1   3.9e+03      39      39 ..     441     441 ..     360     496 .. 0.58
   3 ?   10.2   0.0   0.00019       0.7       7      22 ..     586     601 ..     581     616 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.59
      AAA_22  97 iDEaqhlrs...eealeeL 112
                  DE+++l s    ++++e+
  KHJ31267.1 308 ADEIDRL-SrenRDQIREI 325
                 5778887.52335555555 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.1
      AAA_22  39 r 39 
                 r
  KHJ31267.1 441 R 441
                 1 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.00019
      AAA_22   7 ilvvtGesGtGKTtll 22 
                 +++++G++G+GKT+++
  KHJ31267.1 586 CIFCYGQTGSGKTHTM 601
                 89***********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (843 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2266  (0.126387); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.91u 0.29s 00:00:01.20 Elapsed: 00:00:00.45
# Mc/sec: 5618.67
//
Query:       KHJ31268.1  [L=337]
Description: putative vacuolar protein sorting protein vps66 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.12   12.0   0.0       0.32   10.6   0.0    1.6  1  Acyltransferase  Acyltransferase


Domain annotation for each model (and alignments):
>> Acyltransferase  Acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   1.8e-05      0.32      18     119 ..     105     201 ..      97     215 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 1.8e-05
  Acyltransferase  18 lvaNHqsylDvlllwlllyksngprnvviiakkellsipllgflmrllgfifidRksnaraagslenise.lleegkl.vviFPEGtrsregel 109
                      +++  +s +D+l+l++++       ++++i+  +  ++++++ l+  +++      +   + + ++ i+  +  +++  vv+FPE t+s+  ++
       KHJ31268.1 105 IASSFTSPIDALYLAAIF------DPIFTISYPHTEKVQIVSLLSAIFRALAKPE-EYPPKDAKMTDIKTiVADNQDRaVVVFPECTTSNGLGI 191
                      666668899999999999......7888888887777777777776666654444.44455566777777555555555***********9888 PP

  Acyltransferase 110 lpfkkGlvrl 119
                      l+   +l  +
       KHJ31268.1 192 LRLCPSLLTV 201
                      7766666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 2628.55
//
Query:       KHJ31269.1  [L=499]
Description: hypothetical protein EV44_g1519 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0036   17.3   4.8     0.0036   17.3   4.8    2.2  2  zf_CCCH_4  Zinc finger domain
     0.0044   17.7   0.5      0.056   14.2   0.2    2.4  2  Torus      Torus domain
  ------ inclusion threshold ------
      0.011   15.6   2.3      0.011   15.6   2.3    2.0  2  zf-CCCH    Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      0.085   12.7   9.5        0.5   10.2   0.6    2.3  2  zf-CCCH_4  CCCH-type zinc finger


Domain annotation for each model (and alignments):
>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.6      0.72   3.2e+03       1      11 [.     348     360 ..     348     360 .. 0.57
   2 !   17.3   4.8   7.9e-07    0.0036       1      19 []     409     428 ..     409     428 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.72
   zf_CCCH_4   1 Ckfflq..GtCkk 11 
                 C f+++  G C++
  KHJ31269.1 348 CWFWAEsvGGCRY 360
                 7777654455555 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 7.9e-07
   zf_CCCH_4   1 Ckfflq.GtCkkGdkCrFaH 19 
                 C ++++ G C +G++C++ H
  KHJ31269.1 409 CWYWATkGVCGHGTACKYVH 428
                 *******************9 PP

>> Torus  Torus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0       0.2     9e+02      69      95 ..     344     373 ..     307     380 .. 0.79
   2 !   14.2   0.2   1.2e-05     0.056      71      91 ..     407     428 ..     397     432 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.2
                 T--B-HHHHH...T--SSGGG-SSB-S--- CS
       Torus  69 esyfClfFar...GlCakGkkCeylHrlPt 95 
                 ++  C f+a    G+ ++ ++C  lH  P+
  KHJ31269.1 344 KTKTCWFWAEsvgGCRYRPEECLNLHVKPK 373
                 457899999666355578899*99998887 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 1.2e-05
                 -B-HHHH.HT--SSGGG-SSB- CS
       Torus  71 yfClfFa.rGlCakGkkCeylH 91 
                   C ++a +G+C +G+ C+y+H
  KHJ31269.1 407 RSCWYWAtKGVCGHGTACKYVH 428
                 679999879************* PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.3      0.41   1.8e+03       2      12 ..     344     354 ..     343     360 .. 0.61
   2 ?   15.6   2.3   2.5e-06     0.011       2      26 ..     405     429 ..     404     429 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.41
                 HCHCBCHHHHH CS
     zf-CCCH   2 ktelCrffmrt 12 
                 kt+ C f++++
  KHJ31269.1 344 KTKTCWFWAES 354
                 77777777775 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 2.5e-06
                 HCHCBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH   2 ktelCrffmrtGyCkyGdrCkFaHg 26 
                 k + C +++  G C +G +Ck+ Hg
  KHJ31269.1 405 KPRSCWYWATKGVCGHGTACKYVHG 429
                 788899******************8 PP

>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.6   0.00011       0.5       1      13 [.     346     360 ..     346     360 .. 0.95
   2 ?    6.5   2.8    0.0016       7.3       3      21 ..     409     428 ..     407     429 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00011
   zf-CCCH_4   1 rlCpyfa..kGsCrf 13 
                 ++C+++a  +G+Cr+
  KHJ31269.1 346 KTCWFWAesVGGCRY 360
                 68************9 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0016
   zf-CCCH_4   3 Cpyfa.kGsCrfGdnCrFsH 21 
                 C+y+a kG C  G  C++ H
  KHJ31269.1 409 CWYWAtKGVCGHGTACKYVH 428
                 ******9***********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3588.09
//
Query:       KHJ31270.1  [L=495]
Description: putative sac3 ganp domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-29  103.8   1.6    5.4e-15   55.5   0.2    2.2  2  SAC3_GANP        SAC3/GANP family
  ------ inclusion threshold ------
        0.1   12.6   0.0       0.34   10.9   0.0    1.8  2  CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family
       0.13   12.2   0.2       0.34   10.8   0.2    1.6  1  DUF1348          Protein of unknown function (DUF1348)


Domain annotation for each model (and alignments):
>> SAC3_GANP  SAC3/GANP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.2     2e-16   1.2e-12      41     123 ..     237     310 ..     200     335 .. 0.82
   2 !   55.5   0.2   9.1e-19   5.4e-15     169     287 ..     336     454 ..     315     459 .. 0.86

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 2e-16
                 XXXXXXXXXXXXXXX-----HHHHHHHHHHHHHHTG..G..GTTTCHHHHHHHHHHHHHHHHHTT--SHHHHHHHHHHHHHHH CS
   SAC3_GANP  41 KeysRsaagqeeplpsdlRppevLkkTldYLlkeildreeeelaevydFiwDRtRaiRqDltiqnlskaeaveilerivrfhi 123
                 K+y R    +++p+ps++Rp +vL+kTld+L k+         +e y++i D +++ RqDlt+q++ ++ +v+++e+ +r+ +
  KHJ31270.1 237 KRYFR---LTSAPNPSQVRPEPVLRKTLDFLKKKWK------KEENYSYICDQFKSLRQDLTVQHIANEFTVSVYETHARIAL 310
                 56666...5789*******************96655......4689**********************************976 PP

  == domain 2  score: 55.5 bits;  conditional E-value: 9.1e-19
                 THHHHHHHHHHHTTT-..HHHHHH.HCTS-HHHHTSHHHHHHHHHHHHH--TTHHHHHHHHTTS-HHHHHHHGGGHHHHHHHHHHHHHHHS-TT---EE CS
   SAC3_GANP 169 neaefrayylLlnlrd..pdilre.vqelpseilkspevqlalklvaalqennyvrffklvkevsylqacllerhfnevRrkalkalsraykskskkvp 264
                 n  ef+ay +L+ +++   ++l++ + +l +   ++p+++ al +++al+ +ny rff+l+++++ + a l+ +++ + R  al+ +++ay   + +v+
  KHJ31270.1 336 NVVEFKAYRILYFIHTsnRTALSDmLADLTTAEKEEPPIKHALCVRSALALGNYHRFFRLYQNTPNMGAYLMDMFIVRERLAALSNICKAY---KPDVK 431
                 668********987543256666626699**************************************************************...689** PP

                 HHHHHHHTT-SSHHHHHHHHHHT CS
   SAC3_GANP 265 leeLaelLlfddeeeaeefceay 287
                 l+ +++ L+f+++++a++f+  +
  KHJ31270.1 432 LRFIVDELGFESDSDAAQFICDH 454
                 ******************95544 PP

>> CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.68   4.1e+03      69      92 ..     271     294 ..     263     299 .. 0.75
   2 ?   10.9   0.0   5.7e-05      0.34      26     123 ..     360     456 ..     343     473 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.68
  CSN8_PSD8_EIF3K  69 sadltadvagleelvReeiaklvg 92 
                       ++++++++++++l ++ +++ + 
       KHJ31270.1 271 EENYSYICDQFKSLRQDLTVQHIA 294
                      468999999999998888777665 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 5.7e-05
  CSN8_PSD8_EIF3K  26 llkrlpaaiqqsdeeiqklltLetlLeeanyakfwstlksddlsadltadvagleelvReeiaklvgkaY.esIsadvlaelLglssdeelekf 118
                      +l++l +a +++ + i+++l +  +L  +ny +f+ +++++  ++   + ++++    R  +++ + kaY    +   +   Lg++sd+++++f
       KHJ31270.1 360 MLADLTTAEKEE-PPIKHALCVRSALALGNYHRFFRLYQNT--PNMGAYLMDMFIVRERLAALSNICKAYkPDVKLRFIVDELGFESDSDAAQF 450
                      455667777776.9**********************77765..7777888999998889999999*****547999999999999999999999 PP

  CSN8_PSD8_EIF3K 119 vkev.g 123
                      + ++ g
       KHJ31270.1 451 ICDHnG 456
                      998855 PP

>> DUF1348  Protein of unknown function (DUF1348)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   5.7e-05      0.34      51      82 ..     261     292 ..     256     318 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 5.7e-05
     DUF1348  51 veflkkkwekeldyrlikelfaftdnriavrf 82 
                  +flkkkw+ke++y  i + f    + ++v++
  KHJ31270.1 261 LDFLKKKWKKEENYSYICDQFKSLRQDLTVQH 292
                 68*************99999887777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (495 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       855  (0.0476881); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3486.56
//
Query:       KHJ31271.1  [L=589]
Description: putative vacuolar protein-sorting-associated protein 36 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-42  145.0   0.1      3e-42  144.5   0.1    1.2  1  EAP30           EAP30/Vps36 family
    3.2e-24   84.9   0.0    6.4e-24   84.0   0.0    1.5  1  Vps36_ESCRT-II  Vacuolar protein sorting protein 36 Vps36
    2.9e-17   61.8   3.4    2.9e-17   61.8   3.4    2.5  2  Vps36-NZF-N     Vacuolar protein sorting 36 NZF-N zinc-finger
    0.00039   20.3   0.0    0.00095   19.0   0.0    1.6  1  GRAM            GRAM domain
     0.0021   18.1   8.3       0.03   14.4   0.3    3.1  2  zf-Sec23_Sec24  Sec23/Sec24 zinc finger
  ------ inclusion threshold ------
       0.12   12.4   0.0       0.23   11.5   0.0    1.4  1  EutK_C          Ethanolamine utilization protein EutK C-termi
        3.3    7.1  17.2        1.2    8.5   0.2    3.5  3  zf-RanBP        Zn-finger in Ran binding protein and others
        4.6    7.4   9.2       0.26   11.3   1.2    2.5  2  DZR             Double zinc ribbon
        7.8    7.6   7.5         56    5.0   0.4    3.6  3  zf-C2H2_4       C2H2-type zinc finger


Domain annotation for each model (and alignments):
>> EAP30  EAP30/Vps36 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.5   0.1   1.5e-45     3e-42       1     235 [.     345     574 ..     345     575 .. 0.91

  Alignments for each domain:
  == domain 1  score: 144.5 bits;  conditional E-value: 1.5e-45
       EAP30   1 vGiagl.qrreqtaaeyqdlgaellaealqdleallakfkesLvklaekhkakiksdpafraqftkmcaslGvdplssk.....kseslgflellglgd 93 
                 vGiagl  rr q+++++    ++++ +a++dleal+++++e +++lae+++++  + +   ++++ ++++lG+  +++k     +sesl          
  KHJ31271.1 345 VGIAGLeARRLQERQKN----EKVIGSAFEDLEALMSSAQE-IIALAESFASTNGNLN---SDSNAVASALGL--ITTKemlgsNSESL---------- 423
                 7****************....********************.*********9766544...577899*****9..66676776566777.......... PP

       EAP30  94 fyyeLavqivevclat....raengglisleelyalvnrarggvalvspdDllraiekl..lvlg.......sglsvlqvggkkvvrSvptelntdqve 179
                 ++ eL + + e+++++     +++gg+isl +l+a +nrarggv+lvsp+D+ ++ +++  l+l+       sg+ ++q           +  +tdq  
  KHJ31271.1 424 YITELTRDLTEFLTDDnrgiLSKSGGIISLVDLWAKFNRARGGVELVSPHDFAKSTNQWesLKLPfrlrkfkSGVLIVQ-----------GNEHTDQ-- 509
                 **************88766666677**********************************665555**************...........*******.. PP

       EAP30 180 vlevakrlvsllaekssg..............ggvtaselaeeeenlgwsvarakeaLeelereGllwvD 235
                   +++++++++l+e ++               +gvta+e ae+   +gws+++a+e+Le++e+eG+l+++
  KHJ31271.1 510 --KIITSIKAWLKELQTIppehevpwdwqrfgRGVTAEETAER---FGWSIGVAEEELEMVEEEGTLCRE 574
                 ..*************9989************999******888...**********************97 PP

>> Vps36_ESCRT-II  Vacuolar protein sorting protein 36 Vps36
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.0   0.0   3.2e-27   6.4e-24       3      88 ..       9      91 ..       7      95 .. 0.96

  Alignments for each domain:
  == domain 1  score: 84.0 bits;  conditional E-value: 3.2e-27
  Vps36_ESCRT-II  3 ttsgrpvLeenEsiilvqdnVglYegdeKilnrqnGrlyLTthriiyvdsadpkkeslslelklvesvsekelssgflrsspkiil 88
                    t+  rpvL ++E+ +++qdnVg+Ye+++K  n+qnG++yLT+hri y+d+++  k+ ++++lk++e+    e   gfl+sspkii+
      KHJ31271.1  9 TSALRPVLLPGEVLLFTQDNVGIYEDKHKLDNYQNGQVYLTSHRICYIDNQKSRKNCIAIDLKDIERY---EFYGGFLKSSPKIIF 91
                    6788****************************************************************...*************97 PP

>> Vps36-NZF-N  Vacuolar protein sorting 36 NZF-N zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.8   3.4   1.4e-20   2.9e-17       6      63 ..     137     197 ..     134     198 .. 0.92
   2 ?   -0.5   0.5       0.4   7.9e+02      10      20 ..     233     243 ..     222     252 .. 0.75

  Alignments for each domain:
  == domain 1  score: 61.8 bits;  conditional E-value: 1.4e-20
  Vps36-NZF-N   6 vtatWvCpICsfsNevpsnfdp...nastplPpClaCGvkpdlelikksikasasskksee 63 
                  ++atW+CpIC+fsN vpsnfdp   n++tp+ pC +CGvkp+ +++ k+++ +a+ ++ ++
   KHJ31271.1 137 TSATWICPICTFSNLVPSNFDPttaNERTPVAPCSTCGVKPSWAVVFKAAILNATYENHNT 197
                  579**********************9*************************9998877765 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.4
  Vps36-NZF-N  10 WvCpICsfsNe 20 
                    Cp C+f N+
   KHJ31271.1 233 FQCPRCTFLNH 243
                  56888888886 PP

>> GRAM  GRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   4.8e-07   0.00095      32      99 ..      43     111 ..      17     116 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 4.8e-07
                 EEEEEEESSEEEEEE-STT---EEEEEGGGEEEEEE....-TT-TT-EEEEESS-...EEEEE--TTHH CS
        GRAM  32 qGrlyltnyrlcFrskplgsskkvvlpladikriekstsaanllengiqvetsskdl.elaFagfvtrd 99 
                 +G++ylt++r+c+ ++ +  + ++ + l+di+r e + +    +++ i v   +k+l    +++ ++++
  KHJ31271.1  43 NGQVYLTSHRICYIDNQKSRKNCIAIDLKDIERYEFYGGFLKSSPKIIFVPKPEKHLsSRIWTSQCNSS 111
                 8****************999989**********999999888888888888777777666666666555 PP

>> zf-Sec23_Sec24  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.3   1.5e-05      0.03      22      38 ..     139     155 ..     135     156 .. 0.88
   2 !    5.3   2.8    0.0099        20       9      31 ..     232     254 ..     228     256 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.5e-05
  zf-Sec23_Sec24  22 krwiCnfCnhknevppe 38 
                      +wiC++C ++n vp++
      KHJ31271.1 139 ATWICPICTFSNLVPSN 155
                     68************986 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0099
  zf-Sec23_Sec24   9 aylNpfckidfggkrwiCnfCnh 31 
                     ++ +p c++ ++ ++  C++Cn+
      KHJ31271.1 232 SFQCPRCTFLNHPSLRACELCNT 254
                     667999***************98 PP

>> EutK_C  Ethanolamine utilization protein EutK C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00011      0.23      16      48 ..     540     572 ..     537     575 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00011
      EutK_C  16 qGmtaGevaahfaWPLekarqvLeqLfsdGaLr 48 
                 +G+ta e a  f+W +  a + Le +  +G+L 
  KHJ31271.1 540 RGVTAEETAERFGWSIGVAEEELEMVEEEGTLC 572
                 69************************9999995 PP

>> zf-RanBP  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.2    0.0006       1.2       5      14 ..     141     150 ..     139     152 .. 0.94
   2 ?   -0.8   1.1      0.49   9.8e+02       7      13 ..     170     176 ..     170     176 .. 0.89
   3 ?    6.4   3.7    0.0027       5.4       6      26 ..     234     254 ..     234     255 .. 0.94

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0006
                 EE-SSS--EE CS
    zf-RanBP   5 WdCskClvqN 14 
                 W+C+ C+++N
  KHJ31271.1 141 WICPICTFSN 150
                 ********99 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.49
                 -SSS--E CS
    zf-RanBP   7 CskClvq 13 
                 Cs+C+v+
  KHJ31271.1 170 CSTCGVK 176
                 ****985 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0027
                 E-SSS--EEESSSSB-TTT-- CS
    zf-RanBP   6 dCskClvqNfawstkCvaCqa 26 
                 +C+ C++ N ++  +C+ C +
  KHJ31271.1 234 QCPRCTFLNHPSLRACELCNT 254
                 8*****************976 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   1.4      0.73   1.5e+03      15      19 ..     170     174 ..     133     181 .. 0.58
   2 ?   11.3   1.2   0.00013      0.26       1      22 [.     235     256 ..     235     269 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.73
         DZR  15 CseCg 19 
                 Cs+Cg
  KHJ31271.1 170 CSTCG 174
                 44444 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00013
         DZR   1 CpqCgeelppdarfCseCgtkl 22 
                 Cp+C   ++p+ r C+ C+t+l
  KHJ31271.1 235 CPRCTFLNHPSLRACELCNTSL 256
                 ********************98 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.2     0.034        67       2      12 ..     142     150 ..     141     153 .. 0.83
   2 ?    5.0   0.4     0.028        56       1      17 [.     233     247 ..     233     248 .. 0.87
   3 ?   -0.1   0.1       1.2   2.3e+03       2      10 ..     248     256 ..     247     261 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.034
   zf-C2H2_4   2 kCpiCgksFss 12 
                 +CpiC  +Fs+
  KHJ31271.1 142 ICPIC--TFSN 150
                 7****..*987 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.028
   zf-C2H2_4   1 fkCpiCgksFsskkaLl 17 
                 f+Cp C  +F ++ +L+
  KHJ31271.1 233 FQCPRC--TFLNHPSLR 247
                 89****..**9988876 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 1.2
   zf-C2H2_4   2 kCpiCgksF 10 
                  C++C++s 
  KHJ31271.1 248 ACELCNTSL 256
                 6****9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (589 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 4197.02
//
Query:       KHJ31272.1  [L=198]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       558  (0.0311228); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1481.17
//
Query:       KHJ31273.1  [L=97]
Description: putative gaf domain nucleotide-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-07   30.0   0.0    6.7e-07   29.7   0.0    1.0  1  GAF_2     GAF domain
    0.00069   20.3   0.0    0.00079   20.1   0.0    1.0  1  GAF       GAF domain


Domain annotation for each model (and alignments):
>> GAF_2  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   7.5e-11   6.7e-07      47     134 ..       6      92 ..       2      94 .. 0.83

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 7.5e-11
                 TT-S-B---TTHHHHHHHHTS-EEES-GGG-S-HHHHHHHHHTT--EEEEEE-T..TS..---EEEEES......--HHHHHHHHHHHHHHH CS
       GAF_2  47 gaaldrplgeglvgealrtgrpvilndleedpdkkglpaghaglrsflavPlis..eg..rvvGvlnlyankppafdeedlelLeelaeqia 134
                 ++++  ++ +g++g++++++++++++d+++     g+   + +  s+++vP+++  +g  +vv+v+ + + ++++fd  d+ +Le la+ ++
  KHJ31273.1   6 CQKI--AFTQGVCGKSAMSKQSIVVDDVDN---FPGHIRCDSDTLSEIVVPILGflGGekKVVAVIDIDSRERGTFDGVDRLWLEKLASVLG 92 
                 5666..889******************888...44555678999999*****544466346*******9999999*************9876 PP

>> GAF  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   8.8e-08   0.00079      48     128 ..      12      90 ..       4      94 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 8.8e-08
                 TSHHHHHHHHHSSSEEESTGGTSTTHHTTHHHHHHHHTTESEEEEEEEEE....TTEEEEEEEEEESSS.CSHHHHHHHHHHHHHH CS
         GAF  48 grgicgqvlatgqplvipdstpdprfaqynrrdllenmgirsslvvPlvn....dgelwGllvlhnpsp.pftreelellqvladq 128
                  +g+cg+ + ++q++v++d+++ p + +           + s +vvP++     + +++++++++++ +  f+  ++  l+ la+ 
  KHJ31273.1  12 TQGVCGKSAMSKQSIVVDDVDNFPGHIR-------CDSDTLSEIVVPILGflggEKKVVAVIDIDSRERgTFDGVDRLWLEKLASV 90 
                 6899**************9888888888.......578999********77877888*********55557988888888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       312  (0.017402); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 718.90
//
Query:       KHJ31274.1  [L=492]
Description: putative homocitrate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.1e-80  268.4   1.1    1.1e-79  267.8   1.1    1.3  1  HMGL-like  HMGL-like


Domain annotation for each model (and alignments):
>> HMGL-like  HMGL-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  267.8   1.1     6e-84   1.1e-79       2     264 .]      69     328 ..      68     328 .. 0.98

  Alignments for each domain:
  == domain 1  score: 267.8 bits;  conditional E-value: 6e-84
                 -EEEE-TTTHHHHTSSS---HHHHHHHHHHHHHHT-SEE--TSGGGT.THHHHHHHS---TT-B..--EE-SSHHHHHHHHH....TT-SEEEEEEES- CS
   HMGL-like   2 vkivdttLRDGeqalkaalsveeklaiakaLdeagvdeiEvgfpaaseddfevvraiakavkkarilalvrarekdikaavealkgagakrvhvfiats 100
                 +ki+++tLR+Geq+++a +++++k++iakaLde+gvd+iE++ paase+++++++ai++ + ka+il+++r++++d k ave    +g++ v+v+i ts
  KHJ31274.1  69 FKIIESTLREGEQFANAFFDTKKKIEIAKALDEFGVDYIELTSPAASEQSRADCEAICNLGLKAKILTHIRCHMDDAKIAVE----TGVDGVDVVIGTS 163
                 689*******************************************************************************....************* PP

                 HHHHHHHHSSTHHHHHHHHHHHHHHHHHTT-ETTT-BTTTBS--HHHHHHHHHHHHHHT-SEEEEEETTS---HHHHHHHHHHHHHHS-.GGGEEEEEB CS
   HMGL-like 101 elhlkaklkkdreevakkaeeavkaarslgkdvelsledasrtdleflaevveaaeeaGatriniaDtvGvltPneaaelisalkervkdkvilsvHcH 199
                    ++++++kd+ ++ + a e++++++s+++++++s ed+ r++l +l+ ++ +++++G++r+ iaDtvG+++P+++++li++l+ +v+  +++++H+H
  KHJ31274.1 164 SYLMEHSHGKDMTYITNTAIEVINYVKSHNIEIRFSSEDSFRSNLVDLLSIYSTVDKVGVNRVGIADTVGCASPRQVYDLIRTLRGVVS--CDIETHFH 260
                 *****************************************************************************************..******** PP

                 -TTS-HHHHHHHHHHTT--EEEEBTTS--SSBBB-BHHHHHHHHHHTT...-B----HHHHHHHHHHH CS
   HMGL-like 200 ndlGlAvantlaAveaGadrvdgtvnGlGeraGnaaleelvaalealg...vdtgldlqklrsiaalv 264
                 nd+G+A+an++ A+eaGa+++d++v+G+Ger+G ++l  l+a + +++   v  +++l+kl +i++lv
  KHJ31274.1 261 NDTGCAIANAYCALEAGATHIDTSVLGIGERNGITPLGGLMARMIVANreyVTGKYKLHKLKDIEELV 328
                 *************************************87777776666699999***********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (492 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       688  (0.0383736); expected 358.6 (0.02)
Passed bias filter:                      546  (0.0304535); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3531.61
//
Query:       KHJ31275.1  [L=534]
Description: putative sugar transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.2e-30  103.7  41.5      1e-27   97.0  20.6    2.0  2  MFS_1     Major Facilitator Superfamily
    1.7e-18   66.8  22.3    6.5e-18   64.8  22.3    1.8  1  Sugar_tr  Sugar (and other) transporter
  ------ inclusion threshold ------
        2.5    8.0  13.5       0.54   10.2   4.0    3.4  3  DUF418    Protein of unknown function (DUF418)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.0  20.6   1.7e-31     1e-27      16     350 ..      95     481 ..      76     483 .. 0.80
   2 !   20.9  12.9   2.4e-08   0.00014      41     173 ..     385     526 ..     381     534 .] 0.80

  Alignments for each domain:
  == domain 1  score: 97.0 bits;  conditional E-value: 1.7e-31
       MFS_1  16 gpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslw.lllvlrvlqGlgagalfpagaaliadw 113
                 +++lp  l+++++is   +   +   ++g +++++++G  sd +Grr  + l+l++ +l++++  + ss+w  ++++ ++ G+g g+ +p+  al+ ++
  KHJ31275.1  95 ALTLP-SLSNEFNISNKDVRYTTCYLFVGLCLGTIFWGIGSDIIGRRVSFNLTLIIAGLSGIAVGL-SSSWlSVCLFYLVVGFGVGGNLPVESALFLEI 191
                 45566.9*************98888899********************************444445.999989************************** PP

       MFS_1 114 fpkeergraigllsagfslGailgpllggllasslg........Wravfyilaivsllafv..lfllllpeepperkrkspkeee.............. 188
                  p+ e gr++ lls+ + +G +++  +++++    g        Wr++  +l+ +++++f+  +f++ l+e+p+       +  e              
  KHJ31275.1 192 LPH-ESGRYLTLLSIWWPIGQLIA-SFSAWCF--MGdnrnpkkgWRYSCCVLGTLTCIMFIgrFFFFHLFESPKYLLSRGRQA-Eavavvhgiayrnkt 285
                 ***.********************.6666666..234667*********************8764444444444444444444.358999999999999 PP

       MFS_1 189 ..........................kgtgpaplvp..................awkallkdpvlwillialllfffgfsglltllplylqevlgls.. 241
                                                    +                    +++ k+  l  l+++++ +++g+ ++  +lp yl + ++ s  
  KHJ31275.1 286 ktwltedilnefgghfepnqrhslpvR--------DiihrkisnysvkrcirlfETREIAKNTTL--LWFCWFAIGLGYPLFNDFLPQYLSSLHDSSge 374
                 999999999999999998777666652........232233334555564444545555555555..999999999*************99999999*8 PP

       MFS_1 242 ..glllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllllvlvliGfglgfvfpsllalasdlappeeagtas 338
                    ++ ++    ++ ++++++++la + +d  g  r  ++a++ ++++ l+++++  +   ++ + ++++ Gf++  +++ l++++ +++p+  + t s
  KHJ31275.1 375 qiKVYRNY---VIITIASIPGSILACYTVDVQGIGRKGTMAVSTFMAGILLIVFVFSP-LHLVQVGISAVQGFFQNAMYAVLFTYTPESFPAPIRCTGS 469
                 76555555...5555566666999******9777777777777777777777777777.55777779999***************************** PP

       MFS_1 339 glfntagslgga 350
                 g+ ++++ +gg+
  KHJ31275.1 470 GISGFLNRIGGL 481
                 **********97 PP

  == domain 2  score: 20.9 bits;  conditional E-value: 2.4e-08
       MFS_1  41 yalgaavaslplGrlsdr..fGrrrvlllglllfalglllllfasslw.lllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGail 136
                  +++++ +s+++ + +d   +Gr+ ++ ++ ++ ++ l++++f s+l  + +   ++qG+++ a++++  +++ + fp + r  + g+ +  + +G + 
  KHJ31275.1 385 ITIASIPGSILACYTVDVqgIGRKGTMAVSTFMAGILLIVFVF-SPLHlVQVGISAVQGFFQNAMYAVLFTYTPESFPAPIRCTGSGISGFLNRIGGLS 482
                 5678888999999999974578888************444448.888879999********************************************** PP

       MFS_1 137 gpllggllasslg.......Wravfyilaivsllafvlfllllp 173
                 + ++++ + +  +         ++ +i + +++ af+ +l+l +
  KHJ31275.1 483 AIIIAANIPATSSqdgvildAKVPAIISGTFMVAAFLAMLCLSV 526
                 *9999966644445678888666666666666666665444444 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.8  22.3   1.1e-21   6.5e-18      43     443 ..     103     531 ..      63     532 .. 0.73

  Alignments for each domain:
  == domain 1  score: 64.8 bits;  conditional E-value: 1.1e-21
                 H.......HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHH CS
    Sugar_tr  43 e....ssvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRg 137
                 +    s++++  +++ ++vG  +G +f g+ +d++GR+ s+  + +++  +++  +++    s+  +++  ++vG+gvG+   + + +  Ei p +  g
  KHJ31275.1 103 NefniSNKDVRYTTCYLFVGLCLGTIFWGIGSDIIGRRVSFNLTLIIAGLSGIAVGLSS---SWLSVCLFYLVVGFGVGGNLPVESALFLEILPHE-SG 197
                 23444677888899*********************************************...******************************9865.79 PP

                 HHHHHHHHHHHHHHHHHHHHHHHH.HTSS-.TTHHHHHHHCCHHHHHHHHHHGGG...S---HHHHHHTT-HHHHHHHHHH...HHHC......HHHHH CS
    Sugar_tr 138 alvslyqlaitfGilvaaifglgl.nktsn.adgwrillglqlvpallllilllf...lPESPrylvekgkeeeakevlak...lrge......edadr 222
                 +  +l   ++ +G+l+a+++ + +  +++n ++gwr+ + +   ++ +++i+++f   l ESP yl+++g++ ea +v+      + +      ed   
  KHJ31275.1 198 RYLTLLSIWWPIGQLIASFSAWCFmGDNRNpKKGWRYSCCVLGTLTCIMFIGRFFffhLFESPKYLLSRGRQAEAVAVVHGiayRN-KtktwltEDILN 295
                 9999********************9888889********************997744468******************98855323.236667755555 PP

                 HHHHHHHHHHHHHH..............HTTHHHHSH......HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THH....HHHHHHHHHHH.HHHH CS
    Sugar_tr 223 elaeekdsleaeqeee.........kaswkellsskt...vrqrlligvvlqifqqltGinaimyysptifenlglsks....llvtiivgvvn.fvat 304
                 e+   ++ +++ +            + s+k+ ++ ++   + + +++   ++++    G+  +  + p+ +++l+ s      ++ + +++++  +  +
  KHJ31275.1 296 EFGGHFEPNQRHSLPVrdiihrkisNYSVKRCIRLFEtreIAKNTTLLWFCWFA-IGLGYPLFNDFLPQYLSSLHDSSGeqikVYRNYVIITIAsIPGS 393
                 555556666555433377888878877777766666622244444444444444.44555555556666666666555557777777666555415578 PP

                 HHHHHHHHH..S-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHH CS
    Sugar_tr 305 fvaiflvdr..fGRRtllllGaagmaicfvilgivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanfl 401
                 + a ++vd   +GR+ ++ ++++++ i+++++  v+ +l   +    +++ v  ++  a++a     v++ + +E fp  +R +++ i+ ++n +  + 
  KHJ31275.1 394 ILACYTVDVqgIGRKGTMAVSTFMAGILLIVF--VFSPLHLVQ---VGISAVQGFFQNAMYA-----VLFTYTPESFPAPIRCTGSGISGFLNRIGGLS 482
                 88889999745789977777777666666666..577766665...6777777777778888.....9999999*******************987654 PP

                 HHHHHHHHHCHHH......T-HHH.HHHHHHHHHHHHHHHHHS--STT- CS
    Sugar_tr 402 isllfpiiteaig......ggyvf.lvfaglavlfiifvfffvpetkgr 443
                   ++   i  +++       ++v  ++ + ++v++++ ++   +et g+
  KHJ31275.1 483 AIIIAANIPATSSqdgvilDAKVPaIISGTFMVAAFLAMLCLSVETRGE 531
                 4444444433333334777444440445557788888888888888775 PP

>> DUF418  Protein of unknown function (DUF418)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   4.0     9e-05      0.54      96     145 ..     116     165 ..     115     169 .. 0.97
   2 ?    2.0   0.5      0.03   1.8e+02      87     114 ..     405     432 ..     333     456 .. 0.66
   3 ?   -0.2   0.0      0.14   8.5e+02      38      79 ..     489     530 ..     472     534 .] 0.67

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 9e-05
      DUF418  96 TnYllqslictllfygyglglfgslgraallllallifllqllfSklwlr 145
                 T+Yl+  l + ++f g+g +++g+  ++ l+l++++++ + + +S+ wl+
  KHJ31275.1 116 TCYLFVGLCLGTIFWGIGSDIIGRRVSFNLTLIIAGLSGIAVGLSSSWLS 165
                 9***********************************************98 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.03
      DUF418  87 laavGRmALTnYllqslictllfygygl 114
                 +   G mA + +++  l+++++f+++ l
  KHJ31275.1 405 IGRKGTMAVSTFMAGILLIVFVFSPLHL 432
                 3334445555555555555555554444 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.14
      DUF418  38 laeaaeesallelllsvlrylaglllalgyvalillllakek 79 
                 ++ a++++ +  l ++v   ++g ++ ++++a+++l ++++ 
  KHJ31275.1 489 NIPATSSQDGVILDAKVPAIISGTFMVAAFLAMLCLSVETRG 530
                 333446666667777888888899999999998888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       753  (0.041999); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 3943.02
//
Query:       KHJ31276.1  [L=284]
Description: putative enoyl- hydratase isomerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-18   66.0   0.0    3.7e-18   65.8   0.0    1.1  1  ECH_1          Enoyl-CoA hydratase/isomerase
     0.0045   16.5   0.0     0.0051   16.3   0.0    1.1  1  ECH_2          Enoyl-CoA hydratase/isomerase
  ------ inclusion threshold ------
        0.1   12.5   0.0        5.9    6.8   0.0    2.2  2  Peptidase_S49  Peptidase family S49


Domain annotation for each model (and alignments):
>> ECH_1  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.8   0.0   6.2e-22   3.7e-18       6     172 ..      40     203 ..      35     272 .. 0.89

  Alignments for each domain:
  == domain 1  score: 65.8 bits;  conditional E-value: 6.2e-22
                 EEEEEE--CGCTTEE-HHHHHHHHHHHHHHHHSTTECEEEEEE.BTSEEEEEB-HHHHHHHHCHHHHHHHCCHHHHHHHHHHSSSEEEEEE-SEEETHH CS
       ECH_1   6 vaviklnrPeavNalsaelltEliqalekleddksvravvLtG.gdkaFaaGadlkemaeeekakqallkeevlelwtklytvpkpviaavnGaaigGG 103
                 + ++++  P + N l   +l+ l  al  le +   ++vv t+  +k+++ G++l+ +       ++ + e++++l+++ +t p+ +ia vnG+a+++G
  KHJ31276.1  40 IYLLTFSSP-PDNRLVTPFLKSLFLALDILEFSYPHGVVVTTSgVPKFYSNGLNLEHARD----THNFFPESFFALLRRFLTYPMTTIALVNGHAFAAG 133
                 77899****.********************************99***********99887....4799******************************* PP

                 HHHHHHSSEEEEETTTEE.E-GGGGGTS--CTTCHHHHHHHHHHHHHHHHHHHT-EEEHHHHHHCTSSSE CS
       ECH_1 104 lelalacDiviaadnasf.glnelklGlipgaggtqilarkvGkskAeeilllgkkisaqealkvGlvdk 172
                 l la+  D++++  +  f  lnel +G   +  ++ i+ +k+     + ++l +++++++ea k G+vd 
  KHJ31276.1 134 LMLAMYHDYRVMNPSRGFvCLNELDFGAPLKPAMSSIFRQKLRPDVYRTLVLEAHRFTGDEAFKSGIVDL 203
                 ************998885279*******999999**********************************85 PP

>> ECH_2  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   8.6e-07    0.0051      66     172 ..      96     205 ..      59     270 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 8.6e-07
                 -THHHHHHHHH.HHHHHHHHC-SS-EEEEE-BEEETHHHHHHTTSSEEEE-TT-.EEE--GGGGT----TTH.HHHHHCSSTTHHHHHHHH---B-HHH CS
       ECH_2  66 kkeeeeffree.YklnyliatypkpvvalmdGivmGgGvGlsvhgsfrvvtert.vfAmPEtaIGlfPDvGg.syfLsrlpgelGlylalTGarlkgad 161
                 ++++++ff e  ++l  +  typ +++al++G +   G+ l++   +rv+  +   +   E   G     ++ s f ++l+  + + l l ++r++g +
  KHJ31276.1  96 ARDTHNFFPESfFALLRRFLTYPMTTIALVNGHAFAAGLMLAMYHDYRVMNPSRgFVCLNELDFGAPLKPAMsSIFRQKLRPDVYRTLVLEAHRFTGDE 194
                 2233667755427999**********************************9876366789999997555444155667788899999999999999999 PP

                 HHHTTS--EE- CS
       ECH_2 162 alaaglathyv 172
                 a++ g+ + + 
  KHJ31276.1 195 AFKSGIVDLLG 205
                 99999988665 PP

>> Peptidase_S49  Peptidase family S49
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.012        70      10      36 ..     122     148 ..     116     152 .. 0.89
   2 ?    6.8   0.0   0.00099       5.9     119     149 ..     186     216 ..     176     221 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.012
                    EEEEEEEEETHHHHHHTTSSEEEE-TT CS
  Peptidase_S49  10 vasaenvaaSggYylasaadkivanps 36 
                    +a++++ a  +g +la+  d+ v+nps
     KHJ31276.1 122 IALVNGHAFAAGLMLAMYHDYRVMNPS 148
                    68888889999**************97 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.00099
                    CCHEEEHHHHHHTTSSSEETSHHHHHHHHHH CS
  Peptidase_S49 119 egrvltgqqAlklgLvdelgtvddavaelee 149
                    e++ +tg++A k g vd lg++ d+v+ ++e
     KHJ31276.1 186 EAHRFTGDEAFKSGIVDLLGNYIDTVEFIDE 216
                    5678******************999987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2122.26
//
Query:       KHJ31277.1  [L=560]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (560 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       830  (0.0462937); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 4227.71
//
Query:       KHJ31278.1  [L=1140]
Description: putative telomere length regulation protein elg1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-09   38.8   1.7    5.2e-08   33.4   1.7    2.7  1  AAA       ATPase family associated with various cellular acti
    1.4e-06   28.4   4.4    0.00048   20.1   0.0    4.1  4  Rad17     Rad17 P-loop domain
     0.0017   18.6   2.4      0.015   15.6   0.2    3.3  3  AAA_22    AAA domain
     0.0019   17.8   0.0     0.0053   16.3   0.0    1.7  1  AAA_7     P-loop containing dynein motor region
  ------ inclusion threshold ------
       0.01   16.3   2.4       0.15   12.5   0.2    3.1  2  ABC_tran  ABC transporter
      0.011   16.1   0.0       0.03   14.7   0.0    1.8  1  AAA_16    AAA ATPase domain
      0.019   14.9   0.2      0.085   12.8   0.2    2.2  1  ATPase_2  ATPase domain predominantly from Archaea
      0.039   13.7   0.0      0.098   12.4   0.0    1.6  1  RuvB_N    Holliday junction DNA helicase RuvB P-loop domain
      0.084   12.9   0.0       0.19   11.8   0.0    1.5  1  TsaE      Threonylcarbamoyl adenosine biosynthesis protein Ts
       0.11   11.6   0.0       0.46    9.5   0.0    2.0  2  T2SSE     Type II/IV secretion system protein
       0.53   10.8  16.2      0.028   14.9   4.1    3.4  3  AAA_23    AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   1.7   3.2e-11   5.2e-08       1     111 [.     534     712 ..     534     720 .. 0.82

  Alignments for each domain:
  == domain 1  score: 33.4 bits;  conditional E-value: 3.2e-11
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSS.............................................................. CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellsk.............................................................. 37 
                 +l++Gp G+GKT++++ava+el++e++ei+ s+ ++                                                               
  KHJ31278.1 534 ILISGPNGCGKTAAVHAVANELDFEVFEINSSSRRNGkdiiekigdmtlnhhvqrvfgtsrsdnkgnegkyktapttdnkasnqevfhsffksksrkir 632
                 699********************************5569999999999999999999999999999999999999999999999999999999999999 PP

                 ...................STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESS CS
         AAA  38 ...................yvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnr 111
                                    +  + + k++e+ + +++++k+s ++i+E+d ++k++            +q+ +++++     s+  +i+++n+
  KHJ31278.1 633 lhnssqsldsspvslkpkqLSCKDSTKVKEIQNILSREQKQSFILIEEADIIFKED------------SQFWSVIENIIAV-SRRPIIITCND 712
                 99999999999999999994445555555555554444445999999999999999............6666666666553.44666666666 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2       2.2   3.6e+03      66     146 ..     183     240 ..     144     255 .. 0.53
   2 ?    1.2   0.0      0.19   3.1e+02       6      21 ..     412     427 ..     409     443 .. 0.88
   3 !   20.1   0.0   2.9e-07   0.00048      33      78 ..     519     563 ..     507     590 .. 0.82
   4 !    5.4   0.1    0.0097        16     128     172 ..     668     710 ..     608     719 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.2
       Rad17  66 skelgiklrewlnpvslkepdnqksdfkgltekesrflsqiesfkeleL.kdakylklqklGddlrtdkklilvedlPnkfy 146
                 sk+l+   +++ n                         s+i+  k+ +  +    +kl+   + l+t +++  + +l +k +
  KHJ31278.1 183 SKNLVDASKKNNN------------------------SSLIKQAKDNLGnNPEAQNKLNSNSQSLKTSLNVSCLSELSSKIK 240
                 3333333333333........................344443333321022233455656666666666666666665554 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.19
       Rad17   6 nelWfekykPekaeel 21 
                  + W eky P+k ee+
  KHJ31278.1 412 SNMWCEKYAPKKGEEV 427
                 689********99987 PP

  == domain 3  score: 20.1 bits;  conditional E-value: 2.9e-07
       Rad17  33 ewlkadvLesrkkriLLisGPsGCgkstvvkvLskelgiklrewln 78 
                 +w ka     + ++ +LisGP GCgk+ +v+ ++ el +++ e +n
  KHJ31278.1 519 DWSKARKFGPKIHHTILISGPNGCGKTAAVHAVANELDFEVFE-IN 563
                 5777777777889999*********************999887.34 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.0097
       Rad17 128 dlrtdkklilvedlPnkfyrdsdalrevirkylrssealplilvi 172
                   + ++++il+e+    f+ ds ++  vi + + +s+  p+i+  
  KHJ31278.1 668 SREQKQSFILIEEADIIFKEDS-QFWSVIENIIAVSRR-PIIITC 710
                 3456899*******99999997.5899*****999998.777654 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       4.2   6.8e+03      44      71 ..     186     215 ..     164     232 .. 0.73
   2 ?   -1.7   0.0         2   3.2e+03      18      64 ..     310     357 ..     309     392 .. 0.53
   3 !   15.6   0.2   9.3e-06     0.015       8      71 ..     534     622 ..     531     709 .. 0.67

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 4.2
      AAA_22  44 fvtlpsstsskdllrellralglelka..e 71 
                 +v+++++++ ++l ++   +lg++ +a  +
  KHJ31278.1 186 LVDASKKNNNSSLIKQAKDNLGNNPEAqnK 215
                 678888888888889988888888877441 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 2
      AAA_22  18 KTtllrrlleqldeeakaee.erpevvfvtlpsstsskdllrellral 64 
                 K++++r l+e+ ++ ++ e    p++++  +++ +ss  +++++ +++
  KHJ31278.1 310 KSLSIRSLVEEIHKSNHEESsFIPSCLRLPIKHNESSIGIRNRVQKQI 357
                 899999999998755444446444444444444444444443333333 PP

  == domain 3  score: 15.6 bits;  conditional E-value: 9.3e-06
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka..................................e 71 
                 +++ G+ G+GKT  +  ++++l         + ev++++ +s  + kd+ +++   + + +                                    +
  KHJ31278.1 534 ILISGPNGCGKTAAVHAVANEL---------DFEVFEINSSSRRNGKDIIEKIGDMTLNHHVQrvfgtsrsdnkgnegkyktapttdnkasnqevfhS 622
                 799*******************.........9*****************9999877766555556666555555555555555555555555555550 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   3.2e-06    0.0053      32      96 ..     530     592 ..     506     597 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 3.2e-06
       AAA_7  32 nkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdii.esklekrrkgvygP 96 
                  ++ +l+ Gp G+GKt+ ++ + ++ld   + +  in s++ + +++ + i +  l+ + ++v+g 
  KHJ31278.1 530 IHHTILISGPNGCGKTAAVHAVANELD---FEVFEINSSSRRNGKDIIEKIgDMTLNHHVQRVFGT 592
                 57899**********************...99999**99999999876666266788888888886 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   9.4e-05      0.15      12     110 ..     532     653 ..     525     679 .. 0.50
   2 ?    1.9   0.0      0.18   2.9e+02      47      80 ..     808     877 ..     794     913 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 9.4e-05
                 SEEEEEESTTSSHHHHHHHHTTSS--SEEEE....EETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH........................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................... RF
    ABC_tran  12 ekvaivGenGaGKStLlkllagllkpteGei....lldgkdlkeqeleslrkeigvlpqepqlfpeltvren........................... 79 
                 +++ i G+nG+GK+  + ++a++l+ +  ei    +        ++ +   ++ig ++ ++++++     ++                           
  KHJ31278.1 532 HTILISGPNGCGKTAAVHAVANELDFEVFEInsssR--------RNGKDIIEKIGDMTLNHHVQRVFGTSRSdnkgnegkyktapttdnkasnqevfhs 622
                 57889*******************998888833331........2222222222222222222211110000112224444444444433222222444 PP

                 ..HHHTCHHHHHHHSTTGGTTCBGESTTSGGS- CS
                 ..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  80 ..esdeeiekalsklglkelkdtvvksspssLS 110
                   +  ++  k++ + + + l+ ++v+ +p++LS
  KHJ31278.1 623 ffK--SKSRKIRLHNSSQSLDSSPVSLKPKQLS 653
                 331..2233333333333344444444444444 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.18
                 CEGGGB-HHHCCHCEEEE-SS..--S-TTSBHHHH..................................H CS
                 xxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxx..................................x RF
    ABC_tran  47 kdlkeqeleslrkeigvlpqe..pqlfpeltvren..................................e 80 
                 ++++ +++ s+rk +g+++q+  ++  p+l+ +en                                  +
  KHJ31278.1 808 TQIRVISEGSYRKGMGWISQDilASNLPRLEKEENvlhqtsnywnldlgdwgmskclkkwakkvcelnqN 877
                 44455888999**********9988888888888888888888888777776666555444444433321 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   1.9e-05      0.03      25      63 ..     532     569 ..     520     712 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.9e-05
      AAA_16  25 elvllsGesGvGKsslvrellralekdggif.lrgkcdql 63 
                 + +l+sG+ G+GK++ v +++++l  +  +f ++   +++
  KHJ31278.1 532 HTILISGPNGCGKTAAVHAVANELDFE--VFeINSSSRRN 569
                 789******************999877..33366666666 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   5.2e-05     0.085      22      83 ..     533     612 ..     528     766 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 5.2e-05
    ATPase_2  22 iyfiYGpegsGKtaLlkeiienledkdkyviyyialreesiskldefieeeeekkklekal.....................g 83 
                  ++i Gp g+GKta +  ++++l   d++v+ +++ ++++ + + e+i++   +  +++++                     +
  KHJ31278.1 533 TILISGPNGCGKTAAVHAVANEL---DFEVFEINSSSRRNGKDIIEKIGDMTLNHHVQRVFgtsrsdnkgnegkyktapttdN 612
                 6899****************999...667777777888888888888884444444444443333444444444444444441 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0     6e-05     0.098      27      63 ..     524     561 ..     502     584 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6e-05
      RuvB_N  27 kkreealdh.vllyGpPGlGkttlakiiakelgvklki 63 
                 +k + ++ h +l++Gp G Gkt+  + +a+el+ ++  
  KHJ31278.1 524 RKFGPKIHHtILISGPNGCGKTAAVHAVANELDFEVFE 561
                 45555666636789******************987533 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00011      0.19      12      51 ..     524     565 ..     519     567 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00011
                 HHHHHCHTEEEEEEESTTSSHHHHHHHHHHHTT--..----T CS
        TsaE  12 kklakalgdvilLeGdLGaGKTtlvrglakalgve..evkSP 51 
                 +k++ +++++il++G+ G+GKT+ v+++a++l++e  e++S 
  KHJ31278.1 524 RKFGPKIHHTILISGPNGCGKTAAVHAVANELDFEvfEINSS 565
                 4455555669**********************9998899885 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.85   1.4e+03      64     125 ..      79     141 ..      75     144 .. 0.86
   2 ?    9.5   0.0   0.00029      0.46     128     154 ..     530     556 ..     452     562 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.85
       T2SSE  64 eerplqdarlp.ekgvrlrvvllPvvagealviRkksakeltlddlgaeealkekiaevlrka 125
                 +e++ ++a ++ +    lrv+ lP++   +l + kk a + ++ ++ ++++  +ki ++l+ +
  KHJ31278.1  79 KESMAISADINpRPRKILRVSSLPSIGFSNLHLKKKIAFDSRIIKIKYNNESGPKITKILNPP 141
                 5667788888866667799***************9999999*********9999999999866 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00029
       T2SSE 128 erglilvsGgTgsGKttllyallkein 154
                  + +il+sG+ g GKt  + a+ +e++
  KHJ31278.1 530 IHHTILISGPNGCGKTAAVHAVANELD 556
                 4899***************99999876 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   1.2      0.11   1.9e+02      74     184 ..     155     320 ..      87     335 .. 0.41
   2 ?   14.9   4.1   1.7e-05     0.028      20     133 ..     532     675 ..     525     715 .. 0.49
   3 ?   -2.4   0.1       3.5   5.7e+03     143     170 ..     873     900 ..     793     942 .. 0.60

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.11
      AAA_23  74 yveltfenkdgry...............trsiererelskkkgkttkkaklelleideleqfisellgskkiilnlilflgqerfeefelkdkke.... 153
                  +++++++ ++ +                +++  + +++ ++++ +k+ak +l +  e +++++++ +s                         +    
  KHJ31278.1 155 KIKISVSHVSKSNeraihplflgsintkSKNL-VDASKKNNNSSLIKQAKDNLGNNPEAQNKLNSNSQSL------------------------Ktsln 228
                 23333333333333344333333332221111.1111111122222222222222222222222222222........................02222 PP

      AAA_23 154 .............................................................rleelekeleeledekkllekleqekekeke 184
                                                                              +l++   e++  ed+   + k + + +  +e
  KHJ31278.1 229 vsclselsskikiekslrifpkivesawprkgmvhvrgiedteifmslgsnlklnlqlrpkKLKDKAVEINSSEDILISISKSLSIRSLVEE 320
                 22222111111112222222333333333333333333333333333333333333333336666666666666655555555555555554 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1.7e-05
      AAA_23  20 gltlItGpNGaGKTTildAiklaL.ygetprlsrksgrgfeksdveiesegkvkayveltfenkdgry............................... 86 
                    lI+GpNG+GKT+ + A+   L ++ ++ +s+++  ++ k+ +e   + + +  v++ f + + ++                               
  KHJ31278.1 532 HTILISGPNGCGKTAAVHAVANELdFEVFEINSSSR--RNGKDIIEKIGDMTLNHHVQRVFGTSRSDNkgnegkyktapttdnkasnqevfhsffksks 628
                 568*********************666665555533..3333333333333333333333311111111122333444444444443333333332221 PP

      AAA_23  87 .trsiererelskkkgkttkkaklelleideleqfisellgskkiiln 133
                  + +++++ +  +++ ++  k k  +++++++ ++i+++l+++++++ 
  KHJ31278.1 629 rKIRLHNSSQSLDSSPVS-LKPKQLSCKDSTKVKEIQNILSREQKQSF 675
                 111222222222111111.22244444555555555555554444222 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 3.5
      AAA_23 143 feefelkdkkerleelekeleeledekk 170
                 + ++++ +++++l+ +++ ++ l+d + 
  KHJ31278.1 873 ELNQNKDKQLDALKMFTDYIDSLSDSDL 900
                 2233334555566666666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       801  (0.0446762); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.83u 0.28s 00:00:01.10 Elapsed: 00:00:00.45
# Mc/sec: 7549.24
//
Query:       KHJ31279.1  [L=906]
Description: hypothetical protein EV44_g2212 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.054   13.7   0.1       0.23   11.7   0.0    2.1  2  RILP      Rab interacting lysosomal protein


Domain annotation for each model (and alignments):
>> RILP  Rab interacting lysosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.3e-05      0.23      14      42 ..     154     184 ..     147     199 .. 0.83
   2 ?   -2.3   0.0      0.31   5.6e+03      15      30 ..     800     818 ..     799     839 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.3e-05
        RILP  14 eLKaqlfllqE..ELayYkseeleeernsse 42 
                 +LK++++l+++  E+++Y s++l+ e +s+ 
  KHJ31279.1 154 DLKTKVILVKDncEIQCYDSDNLQHEWTSPV 184
                 6*********999**********98877765 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.31
        RILP  15 LKaqlfllq...EELayYk 30 
                 LKa++ l+    EE+ y+k
  KHJ31279.1 800 LKAEVSLVLegiEEMIYLK 818
                 8999887751224666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (906 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 6214.95
//
Query:       KHJ31280.1  [L=215]
Description: hypothetical protein EV44_g0579 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       239  (0.0133304); expected 358.6 (0.02)
Passed bias filter:                      205  (0.011434); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1602.55
//
Query:       KHJ31281.1  [L=270]
Description: putative chitin synthase export chaperone [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-94  314.1  12.6      1e-93  313.9  12.6    1.0  1  Chs7      Chitin synthase export chaperone


Domain annotation for each model (and alignments):
>> Chs7  Chitin synthase export chaperone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  313.9  12.6   5.7e-98     1e-93      31     284 ..       7     265 ..       2     268 .. 0.98

  Alignments for each domain:
  == domain 1  score: 313.9 bits;  conditional E-value: 5.7e-98
        Chs7  31 egiepeCyargiel.antiifnlgsilihivalivtlililrvrskktAvGRkEillflllyllleilelvvdggviplsskvypyfvavqiglisatl 128
                  g+ ++C ++g ++ ++++++nlgsili+++a++vtl+li   ++k +AvGR+E++lfl +y+l++i+e+++ g + pl+++v+ +f++ ++gli a++
  KHJ31281.1   7 PGLDESCRLTGFSIgGDEYVGNLGSILIAAIAILVTLLLIGLAERKLAAVGRREMQLFLFIYILVQICEIFTIGLF-PLNKTVRIAFTGAHLGLILACT 104
                 588999********99**********************************************************99.********************** PP

        Chs7 129 wiLllnglvgfqlleDGtplSllllrlsslvlfivtflialdtfkswtaelsst.....ktiaLfvllyllnlvllvvyvvlqlilvlrvLeerwplga 222
                 wiLl+n+++g+ql+eDGt  S+++ ++s+ +l i+t++ialdt++swt++++s+     ++i+L+++++ll+l+++v+y++l  ilvlr+L+e++p+++
  KHJ31281.1 105 WILLINAIIGYQLWEDGTLFSMGMSVFSASMLCIGTAYIALDTGFSWTGYFNSSlngqnRSIGLYITYQLLPLIFIVIYFILTSILVLRILGELRPMIY 203
                 **********************************************************99*************************************** PP

        Chs7 223 lllgvllfvigqvllyvlskkiCegvkhyidGlffetlcnllavmmvykfWdsiTeddlefs 284
                 l+ +++lf+igqv++yv+s +iCeg +++++G+ffetl++l++v+mv++fW+siTedd++++
  KHJ31281.1 204 LTSAAILFTIGQVFNYVVSIHICEGSSGKLNGAFFETLFTLTSVVMVWVFWSSITEDDWPTP 265
                 ***********************************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       775  (0.0432261); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 1897.81
//
Query:       KHJ31282.1  [L=463]
Description: putative tfiih basal transcription factor complex p47 subunit protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-73  247.1   0.0    1.6e-73  246.7   0.0    1.2  1  Ssl1      Ssl1-like
    5.2e-17   61.8   9.4    5.2e-17   61.8   9.4    3.0  2  C1_4      TFIIH C1-like domain
    9.9e-14   51.9   0.0    1.8e-13   51.1   0.0    1.4  1  VWA_2     von Willebrand factor type A domain
  ------ inclusion threshold ------
       0.32   11.1  25.1        1.6    8.8   9.4    3.0  2  DZR       Double zinc ribbon


Domain annotation for each model (and alignments):
>> Ssl1  Ssl1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  246.7   0.0   3.5e-77   1.6e-73       1     193 []     118     315 ..     118     315 .. 0.97

  Alignments for each domain:
  == domain 1  score: 246.7 bits;  conditional E-value: 3.5e-77
                 EEE-SGGGGSSSSSS-HHHHHHHHHHHHHHHHHHHSTT-EEEEEEEETTEEEEEEEEES-HHHHHHHHHHHTTS---S---HHHHHHHHHHHHSSS-TT CS
        Ssl1   1 vlDlsrameekdlkpsrlavviklleefveeffdqnPisqlgliavkdkkaekltelsGnprkhikaLkslreveakgepsLqnaLelalasLkkvpsh 99 
                 vlDls am ekdl+p+r+ +++++++efv+ +f+qnPisqlg+i ++d+ a +++++sGnp +h+++L++lre+e++g+psLqnaL++ +a L + psh
  KHJ31282.1 118 VLDLSFAMVEKDLRPTRYLLTLRYASEFVTTYFEQNPISQLGIIGMRDGLAIRISDVSGNPMEHLEKLRNLREKEPQGNPSLQNALDMCRAVLYNTPSH 216
                 89************************************************************************************************* PP

                 SEEEEEEEE-SS----SS-HHHHHHHHHHTT-EEEEEEESS--HHHHHHHHHTT.T...TEEEE-SHHHHHHHHHHHHS--------.----EEEEE-- CS
        Ssl1 100 asrevliifsslstcDPgdiyetidelkkekirvsvigLsaevavckelaketk.g...tysvvldethlkelllehvsPppaaksk.keaslikmGfP 193
                 ++rev ii+++l+++DPgdi++ti ++ +++i+vs++gL+a +a+c e++++t+ g    y+v+lde+h++e++++h++Pp + ++k ++asl++mGfP
  KHJ31282.1 217 GTREVFIIYGALLSSDPGDIHDTISSIISDRIQVSIVGLAATLAICAEICHRTNaGsddNYHVALDEQHFREIVMKHTIPPLTRTKKqTQASLLMMGFP 315
                 ******************************************************658999*******************9987655449*********9 PP

>> C1_4  TFIIH C1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   3.0       0.3   1.3e+03      18      36 ..     332     350 ..     314     362 .. 0.83
   2 !   61.8   9.4   1.2e-20   5.2e-17       2      54 ..     396     462 ..     395     463 .] 0.93

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.3
        C1_4  18 deeltssryrCekCkndFC 36 
                 +++lt   y C +C+ + C
  KHJ31282.1 332 HNKLTRNGYLCSRCEIKVC 350
                 4568899999999998887 PP

  == domain 2  score: 61.8 bits;  conditional E-value: 1.2e-20
        C1_4   2 CygCqkkfpklakkkkdee..............ltssryrCekCkndFCiDCDvFiHesLHnCpGCe 54 
                 C++C++ fpk+ +++   +              + s ry+C++C+n+FCiDCDvF He+ HnCpGC+
  KHJ31282.1 396 CFSCLTPFPKTPNDVGAIKnsssltlkkdskgiSESGRYACQSCHNVFCIDCDVFSHETTHNCPGCH 462
                 ***********9998766677899*******99999******************************6 PP

>> VWA_2  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.1   0.0     4e-17   1.8e-13       1     104 [.     115     225 ..     115     228 .. 0.91

  Alignments for each domain:
  == domain 1  score: 51.1 bits;  conditional E-value: 4e-17
       VWA_2   1 lvfvlDtSgSmrngdygpt....rleaakdaveallkslpgdrvglvtfsdgp.evlipltkdkakilnalrnleak..gggtnlaaaLqlarkalkkr 92 
                 l++vlD S  m ++d++pt     l +a ++v+++++++p +++g++ ++dg   ++++++ ++ ++l++lrnl++k  +g+ +l++aL+++r++l ++
  KHJ31282.1 115 LILVLDLSFAMVEKDLRPTryllTLRYASEFVTTYFEQNPISQLGIIGMRDGLaIRISDVSGNPMEHLEKLRNLREKepQGNPSLQNALDMCRAVLYNT 213
                 689**************99666678999999999999**************86155669*************************************999 PP

       VWA_2  93 rkgekrvivlit 104
                 +++ +r++++i 
  KHJ31282.1 214 PSHGTREVFIIY 225
                 99*****99985 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   9.4   0.00037       1.6       3      48 ..     330     373 ..     329     374 .. 0.92
   2 ?    6.5   7.7     0.002       8.8       9      48 ..     390     461 ..     387     462 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00037
         DZR   3 qCgeelppdarfCseCgtklkavaaedrCpsCgekvdpearfCpeC 48 
                  C+++l+ +   Cs+C  k+   + + +Cp+Cg  + + +  + +C
  KHJ31282.1 330 ACHNKLTRNGYLCSRCEIKVC--SLPSQCPACGMTLILSTHLARSC 373
                 6******************98..569***********999999999 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.002
         DZR   9 ppdarfCseCgtklkavaa................................edrCpsCgekvdpearfCpeC 48 
                  p+++ C+ C t+ +++++                                + +C  C+   ++++  Cp C
  KHJ31282.1 390 APRSKACFSCLTPFPKTPNdvgaiknsssltlkkdskgisesgryacqschNVFCIDCDVFSHETTHNCPGC 461
                 57899********99888899**********************88888887778888888888888889999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       672  (0.0374812); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3171.24
//
Query:       KHJ31283.1  [L=157]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.045   13.8   3.4       0.15   12.1   3.4    1.8  1  ArfGap          Putative GTPase activating protein for Arf
      0.047   13.6   0.4      0.047   13.6   0.4    3.1  3  zf-FPG_IleRS    Zinc finger found in FPG and IleRS
        1.2    9.1   9.4       0.34   10.9   5.9    1.9  1  OrfB_Zn_ribbon  Putative transposase DNA-binding domain
        6.8    6.9   7.4         16    5.7   0.3    2.5  3  Jiv90           Cleavage inducing molecular chaperone


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   3.4   3.4e-05      0.15      15      91 ..      50     124 ..      19     148 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.4e-05
                 B-TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG CS
      ArfGap  15 vCaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekr 91 
                  C +Cg++  +   l ++ + C +C g Hrs   + s  r ++     +e+l++ ++ g+++ ++il a+  ++   
  KHJ31283.1  50 SCGNCGSTMYS-EDLCMAQTRCKNCGGTHRSD-IKKSLARPTRFGLPPEEQLKTYRQAGEREYQAILRANAAEKMAT 124
                 57777554332.234455677*********97.999*********************************99777665 PP

>> zf-FPG_IleRS  Zinc finger found in FPG and IleRS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.4     1e-05     0.047      17      27 ..      26      36 ..      22      37 .. 0.92
   2 ?   -2.4   0.2         1   4.6e+03       4       8 ..      51      55 ..      49      57 .. 0.63
   3 ?    2.7   0.3     0.025   1.1e+02       3      12 ..      69      78 ..      69      84 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1e-05
                  TTEEEEE-TTT CS
  zf-FPG_IleRS 17 agrstyfCprC 27
                  ++rs++fC rC
    KHJ31283.1 26 NQRSPEFCKRC 36
                  9********** PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1
                  -TTT- CS
  zf-FPG_IleRS  4 CpRCw 8 
                  C  C+
    KHJ31283.1 51 CGNCG 55
                  55565 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.025
                  B-TTT--BBE CS
  zf-FPG_IleRS  3 pCpRCwryie 12
                  +C  C+++ +
    KHJ31283.1 69 RCKNCGGTHR 78
                  5*****9944 PP

>> OrfB_Zn_ribbon  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   5.9   7.5e-05      0.34      30      61 ..      50      82 ..      39      85 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 7.5e-05
  OrfB_Zn_ribbon 30 tCseCgsknke.alsgrtfkCpnCgfeadrDvn 61
                    +C +Cgs+++  +l   + +C+nCg ++  D+ 
      KHJ31283.1 50 SCGNCGSTMYSeDLCMAQTRCKNCGGTHRSDIK 82
                    5**********9*****************9985 PP

>> Jiv90  Cleavage inducing molecular chaperone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.3    0.0037        16      20      40 ..      24      44 ..      16      47 .. 0.81
   2 ?    1.7   3.1     0.064   2.9e+02       4      15 ..      67      78 ..      45      84 .. 0.77
   3 ?    5.1   0.5    0.0058        26       4      17 ..      67      80 ..      64     107 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0037
       Jiv90 20 ersksaaRfckeCkelhsake 40
                 +++ +  fck+C+ +h+ k+
  KHJ31283.1 24 FKNQRSPEFCKRCDGHHPPKN 44
                566777889********9987 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.064
       Jiv90  4 tiaCtkCgkkHk 15
                + +C++Cg +H+
  KHJ31283.1 67 QTRCKNCGGTHR 78
                567888888885 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.0058
       Jiv90  4 tiaCtkCgkkHkri 17
                + +C++Cg +H+  
  KHJ31283.1 67 QTRCKNCGGTHRSD 80
                679********754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       844  (0.0470746); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1238.90
//
Query:       KHJ31284.1  [L=276]
Description: putative mannosylphosphate transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.2e-26   91.4   8.4    2.8e-19   70.2   4.4    2.1  2  LicD      LicD family


Domain annotation for each model (and alignments):
>> LicD  LicD family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.2   4.4   1.6e-23   2.8e-19       2     104 ..      94     201 ..      93     207 .. 0.89
   2 !   23.4   0.1   3.1e-09   5.5e-05     189     226 ..     209     246 ..     202     247 .. 0.93

  Alignments for each domain:
  == domain 1  score: 70.2 bits;  conditional E-value: 1.6e-23
        LicD   2 kkngleywLsgGTllGavRhggfIPWDDDiDlqmprkdyerLaevfnqlilkkedlreaekdknylenfaklldkntsiterkngngkn.........d 91 
                 +k+++e+w+++GTllG+ ++g ++PWD D+D q  ++ ++ La  +n  i+   d+r +e + n +e   +lld+n ++ er+ gng+n         +
  KHJ31284.1  94 QKYKIETWIAHGTLLGWWWNGKILPWDWDLDTQVSISTLKWLATNLNMTIH---DFRFIE-NVNDHETRQYLLDVNPYTKERSRGNGNNvidarwidtK 188
                 699*****************************************9999666...444433.334445568***************************** PP

        LicD  92 sglyiDIfpldyv 104
                 +gl+iDI++l+++
  KHJ31284.1 189 NGLFIDITGLSEI 201
                 **********876 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 3.1e-09
        LicD 189 rnkeilpleelsplkkvkFegvevpipnnydkyLtelY 226
                 +n++ +++++l pl++  Fegv ++ip +++++Lte+Y
  KHJ31284.1 209 KNDHHYRVQDLYPLRDSIFEGVRAKIPYKFETILTEEY 246
                 599*********************************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 2189.97
//
Query:       KHJ31285.1  [L=453]
Description: hypothetical protein EV44_g3683 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        3.8    7.6  12.6        9.2    6.4  12.6    1.7  1  DZR       Double zinc ribbon


Domain annotation for each model (and alignments):
>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  12.6   0.00051       9.2       1      46 [.     342     393 ..     342     394 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.00051
         DZR   1 CpqCgee..lppdar..fCseCgtklkavaa...edrCpsCgekvdpearfCp 46 
                 C +C+    ++  ar  +C+ Cgt+  +  +   ++rC +C  + ++++ fCp
  KHJ31285.1 342 CEKCHGFhsTRTCARqpMCKLCGTEYHE-GScahPIRCLNCRGPHESTSIFCP 393
                 777764322444444559*******874.33577******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 3585.59
//
Query:       KHJ31286.1  [L=1216]
Description: hypothetical protein EV44_g3020 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1409  (0.0785878); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.79u 0.31s 00:00:01.10 Elapsed: 00:00:00.46
# Mc/sec: 7919.27
//
Query:       KHJ31287.1  [L=782]
Description: putative involucrin repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-25   89.3   3.8    2.2e-25   89.3   3.8    6.0  5  Uds1           Up-regulated During Septation
    0.00094   19.3   5.4    0.00094   19.3   5.4    7.7  8  ADIP           Afadin- and alpha -actinin-Binding
     0.0075   16.5   6.0     0.0075   16.5   6.0    5.9  7  HALZ           Homeobox associated leucine zipper


Domain annotation for each model (and alignments):
>> Uds1  Up-regulated During Septation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.3   3.8   3.7e-29   2.2e-25       4     129 ..     114     237 ..     112     238 .. 0.94
   2 ?    2.2   0.2     0.032   1.9e+02      74     107 ..     294     327 ..     246     336 .. 0.69
   3 ?   -5.8  16.6         3   1.8e+04      37     118 ..     370     454 ..     362     497 .. 0.57
   4 ?   -2.8  14.5       1.1   6.7e+03      19     111 ..     430     525 ..     427     557 .. 0.55
   5 ?   -3.7  11.3       2.2   1.3e+04      69     111 ..     612     690 ..     530     703 .. 0.61

  Alignments for each domain:
  == domain 1  score: 89.3 bits;  conditional E-value: 3.7e-29
        Uds1   4 LvetAlvdsqefeiLsleeVeelkkelkaLeerlealrkkLaletklrdaarsLsrlyssskksakssaarsnskssreslakaeeelaeserkvdela 102
                 L+etAl ds+++eiLs eeVee+k ++++++++++++r+ L +++k+ da+    +lyss+++   +  +++   +++++ ++ e e  eser+++ela
  KHJ31287.1 114 LLETALNDSKNYEILSPEEVEEMKIKCESITRQIKKTRQDLVIQSKYSDATDIVTKLYSSNSST--EVTPENLIVQRDDQVRQHEREFMESERRCEELA 210
                 99********************************************************666666..66777777888899******************* PP

        Uds1 103 selekleeraaevrrrLLeHtAavLql 129
                  +l++le++++ ++ r+L+Ht+ +Lql
  KHJ31287.1 211 INLFRLEKELMITQGRILRHTSRILQL 237
                 *************************97 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.032
        Uds1  74 rsnskssreslakaeeelaeserkvdelaselek 107
                 +  s+++ e  +++e++l ++++++ ++ ++l  
  KHJ31287.1 294 EMVSEQQVEMIKRTEQKLVALNHRIMKIIKKLNG 327
                 4445555566666666666666666666666654 PP

  == domain 3  score: -5.8 bits;  conditional E-value: 3
        Uds1  37 lealrkkLaletkl.rdaarsLsrlyssskksak....ssaarsnskssreslakaeeelaeserkvdelaselekleeraaevrrr 118
                 l++  +k+a ++k+  d  ++L+r   +++ +++    s  ++ + + + ++l k +e  a+  + +d+l +++ +l+e++ +vr++
  KHJ31287.1 370 LKNQYNKIASQNKYlLDEKEKLQRQIQQYLDQKSisnsS--REAQRNIKIDELPKRNEPQATNLNDIDNLREQVNSLNEKLVKVRQK 454
                 444445555555531466666666666666665443211..1111112223455666666666666777777777777666666665 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 1.1
        Uds1  19 sleeVeelkkelkaLeerlealrkkLaletklrdaars..Lsrlyssskksak.........ssaarsnskssreslakaeeelaeserkvdelasele 106
                 +l+++++l+ ++++L+e+l ++r+k   ++kl +   s  L+++    k+  +         +    ++++s +es+  a +e+++ ++++  l+++l+
  KHJ31287.1 430 NLNDIDNLREQVNSLNEKLVKVRQKEIFQKKLESEESSnyLREAD---KRI-QlaeeklliaE----ERARSAEESSCVALTEIKNRDQRISRLEEQLQ 520
                 678999999999999999999999977777775433331144444...222.12445654440....44444444555555555555555555555555 PP

        Uds1 107 kleer 111
                 k e +
  KHJ31287.1 521 KSEIN 525
                 44433 PP

  == domain 5  score: -3.7 bits;  conditional E-value: 2.2
        Uds1  69 k....................................ssaarsnskssreslakaeeelaeserkvdelaselekleer 111
                                                      s++a++n k+ r++l ++ ee++++++   e+++e e+lee 
  KHJ31287.1 612 AqmalnpiaqseidrlksindlqvseiialkenladaSARADENVKELRKELTETIEEYEKMTKASIEWEKEREQLEET 690
                 2444444444445566677777777777776555555555555555556666666666666666666666666666655 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.2       2.2   1.3e+04      55      72 ..      30      47 ..      26      64 .. 0.60
   2 ?    0.3   0.3      0.11   6.5e+02      78     118 ..     114     154 ..      99     171 .. 0.80
   3 ?    2.8   1.3     0.019   1.2e+02      73     137 ..     182     246 ..     165     254 .. 0.83
   4 ?    1.6   8.7     0.044   2.6e+02      73     131 ..     343     401 ..     328     424 .. 0.75
   5 ?   -7.8  16.0         3   1.8e+04      59     151 ..     424     520 ..     409     521 .. 0.54
   6 !   19.3   5.4   1.6e-07   0.00094      67     132 ..     528     593 ..     524     603 .. 0.94
   7 ?    1.1   1.9     0.062   3.7e+02      62     109 ..     624     672 ..     609     679 .. 0.53
   8 ?    0.5   3.1     0.095   5.7e+02      59     116 ..     681     738 ..     675     768 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 2.2
        ADIP 55 reslnetirkleaeierl 72
                +e ++++++++++++ ++
  KHJ31287.1 30 QEIYTTKLHRKTNDNRSQ 47
                555666666666666544 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.11
        ADIP  78 rlktqleqlerelalvqakerqlekklktleqklknekeel 118
                  l+t l ++++   l+ ++  +++ k ++ ++++k+++++l
  KHJ31287.1 114 LLETALNDSKNYEILSPEEVEEMKIKCESITRQIKKTRQDL 154
                 57888888888888888888999999999999999999886 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.019
        ADIP  73 qskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqiktqyahelk 137
                 ++ i + ++q+ q ere   +++++ +l  +l +le+ l++++  + r  + + q+    a+ ++
  KHJ31287.1 182 ENLIVQRDDQVRQHEREFMESERRCEELAINLFRLEKELMITQGRILRHTSRILQLNYEDAQIVR 246
                 556778899********************************999999998888776665555555 PP

  == domain 4  score: 1.6 bits;  conditional E-value: 0.044
        ADIP  73 qskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqiktq 131
                 + + e l+  l  le  +++  +++ +l+ ++ +  +++k + +e ++l++++qq   q
  KHJ31287.1 343 KESLEILQIHLGFLEENITTIDFEQEKLKNQYNKIASQNKYLLDEKEKLQRQIQQYLDQ 401
                 55666777777788888889999999999999999999999999999999999887444 PP

  == domain 5  score: -7.8 bits;  conditional E-value: 3
        ADIP  59 netirkleaeierlqskierlktqleqler.elalvqakerqlekklktleqklknekeelqrlknalqqiktq...yahelkkkdreiekLkeklk 151
                 ne   ++ ++i++l+ ++++l ++l + ++ e+ + + +  +    l+++++ ++   e+l   +  + + + +   +  e+k +d++i++L e+l+
  KHJ31287.1 424 NEPQATNLNDIDNLREQVNSLNEKLVKVRQkEIFQKKLESEESSNYLREADKRIQLAEEKLLIAEERARSAEESscvALTEIKNRDQRISRLEEQLQ 520
                 5555666677777777777777666554330333444444444444444444444444444444444333333311156788888888888888886 PP

  == domain 6  score: 19.3 bits;  conditional E-value: 1.6e-07
        ADIP  67 aeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqiktqy 132
                 a+++ l+sk++rl+ q ++le+ela+v +++++l k +k+ e+ l ++  e +  ++++++++t +
  KHJ31287.1 528 ATYAELESKMDRLEIQIKSLENELASVVSAKAELDKVVKENETILESKDKETNQAQMDIARLQTEL 593
                 8999********************************************************999875 PP

  == domain 7  score: 1.1 bits;  conditional E-value: 0.062
        ADIP  62 irkleaeierlqskierlktqleqlerela.lvqakerqlekklktleq 109
                 i +l++ ++ + s+i  lk++l++   +++  v++  ++l+ ++++ e+
  KHJ31287.1 624 IDRLKSINDLQVSEIIALKENLADASARADeNVKELRKELTETIEEYEK 672
                 3333333444445555555555555544444455555555555544444 PP

  == domain 8  score: 0.5 bits;  conditional E-value: 0.095
        ADIP  59 netirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklkneke 116
                 ++++++le +i++l+ + e++++q ++ + +     +  +++   ++t+++ lkne  
  KHJ31287.1 681 EKEREQLEETIDNLREAKEKVEAQFSDEKVQWIGIRSPNAEALSPNTTTTTILKNEFK 738
                 5667788888888888888888888888888888888888777777777777777644 PP

>> HALZ  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   6.0   1.3e-06    0.0075       8      37 ..     368     397 ..     365     402 .. 0.94
   2 ?    3.6   0.4     0.013        77      29      42 ..     435     448 ..     431     454 .. 0.84
   3 ?    3.8   0.3     0.012        69      13      37 ..     529     553 ..     527     558 .. 0.74
   4 ?   -2.4   0.0      0.99   5.9e+03      18      30 ..     558     570 ..     552     572 .. 0.88
   5 ?   -1.6   0.1      0.57   3.4e+03      19      42 ..     622     645 ..     621     646 .. 0.70
   6 ?   -1.5   0.5      0.51   3.1e+03      26      41 ..     682     697 ..     670     704 .. 0.78
   7 ?   -3.0   0.1       1.5   9.2e+03      27      37 ..     758     768 ..     756     771 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.3e-06
        HALZ   8 dvLKasYdaLksdydsLkkenekLkaelqe 37 
                 + LK +Y++ +s++  L++e+ekL+ ++q+
  KHJ31287.1 368 EKLKNQYNKIASQNKYLLDEKEKLQRQIQQ 397
                 67**************************96 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.013
        HALZ  29 ekLkaelqeLkekl 42 
                 ++L+ ++++L+ekl
  KHJ31287.1 435 DNLREQVNSLNEKL 448
                 78999999999997 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.012
        HALZ  13 sYdaLksdydsLkkenekLkaelqe 37 
                  Y  L s+ d L+ + ++L++el++
  KHJ31287.1 529 TYAELESKMDRLEIQIKSLENELAS 553
                 6777888888888888888877765 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 0.99
        HALZ  18 ksdydsLkkenek 30 
                 k++ d + kene+
  KHJ31287.1 558 KAELDKVVKENET 570
                 78899999***85 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 0.57
        HALZ  19 sdydsLkkenekLkaelqeLkekl 42 
                 s+ d Lk  n+   +e+  Lke l
  KHJ31287.1 622 SEIDRLKSINDLQVSEIIALKENL 645
                 556777777777778888888866 PP

  == domain 6  score: -1.5 bits;  conditional E-value: 0.51
        HALZ  26 kenekLkaelqeLkek 41 
                 ke+e+L+  +  L+e 
  KHJ31287.1 682 KEREQLEETIDNLREA 697
                 7778888777777765 PP

  == domain 7  score: -3.0 bits;  conditional E-value: 1.5
        HALZ  27 enekLkaelqe 37 
                 e+++L+ el++
  KHJ31287.1 758 ERRRLEEELRS 768
                 78999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (782 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3007  (0.167717); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                       112  (0.00624686); expected 17.9 (0.001)
Passed Fwd filter:                        49  (0.002733); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.53u 0.34s 00:00:01.87 Elapsed: 00:00:00.61
# Mc/sec: 3865.14
//
Query:       KHJ31288.1  [L=616]
Description: putative atp-dependent rrna helicase spb4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-35  120.2   0.0    2.3e-34  118.7   0.0    1.9  1  DEAD        DEAD/DEAH box helicase
    5.4e-22   77.8   0.0      1e-21   76.9   0.0    1.5  1  DUF4217     Domain of unknown function (DUF4217)
    4.5e-20   72.1   0.0    1.3e-19   70.6   0.0    1.8  1  Helicase_C  Helicase conserved C-terminal domain
  ------ inclusion threshold ------
      0.025   14.6   0.0      0.083   12.9   0.0    1.8  2  ResIII      Type III restriction enzyme, res subunit
      0.044   14.2   4.6      0.085   13.3   4.6    1.4  1  DUF4019     Protein of unknown function (DUF4019)


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.7   0.0   6.5e-38   2.3e-34       1     174 [.      38     233 ..      38     235 .. 0.81

  Alignments for each domain:
  == domain 1  score: 118.7 bits;  conditional E-value: 6.5e-38
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS...TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTST..................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................... RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet...kgktgpkalivePtreLaeqtlnnlkkfkkyid..................... 75 
                 t++Qa++ipl++g +dv+v+a TGsGKT  +lipv++++++     +k++  a+i++PtreLa q+++ l +++ + +                     
  KHJ31288.1  38 TPVQASTIPLFMGSKDVVVEAVTGSGKTFSYLIPVVEKLLRLdepIKKHHIGAIILSPTRELATQIHSVLLSLLAFHGpsiealnalsdegktrntsec 136
                 89*************************************999987689999************************544444454555555565565453 PP

                 .SEEEEEETTSSH..HHHHHHHHTTCSEEEEEHHHHHHHHHCTSSH..CTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSB CS
                 .xxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  76 .lrvlliiggvaa..rdqlskldngvdivvgtpgrlddllstgkln..lsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATl 169
                  +  +l++gg+a+  +d    l+ +++++++tpgrl+dlls+ +++   s++++lVlDEadrlld gf++++++il +l       ++qr++ ++SA +
  KHJ31288.1 137 tVLPQLFLGGHATpaHDLSIFLKTSPNLIIATPGRLLDLLSSPYVHcpQSSFEVLVLDEADRLLDLGFKNDLQKILGRL-------PKQRRTGLFSASI 228
                 3222245666655414444444677***************88887733666677*************************.......78999******99 PP

                 SHHHH CS
                 xxxxx RF
        DEAD 170 pkdvk 174
                 ++ ++
  KHJ31288.1 229 SEALT 233
                 87665 PP

>> DUF4217  Domain of unknown function (DUF4217)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.9   0.0   2.8e-25     1e-21       1      61 []     436     496 ..     436     496 .. 0.98

  Alignments for each domain:
  == domain 1  score: 76.9 bits;  conditional E-value: 2.8e-25
     DUF4217   1 iqqkleslcakdrdlkelAqkAfvsyvraYsvhlakeiFrvkkLdlealAksfGLleaPki 61 
                 i qk++sl+++dr+l++++qkAfvs+v+aYs+h+a++iFr+ +L++++l  ++GLl++Pk+
  KHJ31288.1 436 IVQKIRSLVLSDRALYDKGQKAFVSWVKAYSKHQASSIFRLADLEWGQLGDAWGLLKLPKM 496
                 569*********************************************************9 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.6   0.0   3.6e-23   1.3e-19       2     111 .]     276     390 ..     275     390 .. 0.89

  Alignments for each domain:
  == domain 1  score: 70.6 bits;  conditional E-value: 3.6e-23
                 HHHHHHHHH.HHTTTTSEEEEEESSHHHHHH.HHHHHHHT...TSTEEEESTTSTHHHHHHHHHHHHTTSSS.EEEESGGGTSSSTSTTESEEEESSSS CS
  Helicase_C   2 kleallell.kleeeggkilifvntidrlek.vklllekk...gikvavlhgelpqnereeileqfnkgesd.vLiatdvaerGidipkvnlVinfdlp 94 
                 kl all ll kle    k++i++ t+  ++   ++l ++     +  ++lhg+ +   r + ++++ +  +  +L++tdva+rG+dip+v+lVi++d+p
  KHJ31288.1 276 KLPALLSLLqKLEPTPTKTIIYLSTCAAVDYfHQIL-SNLlpnLFLLTCLHGKHSPAVRTRNFKKYTESVVPsILVTTDVAARGLDIPQVDLVIQVDPP 373
                 667788888999***************998753333.22245479999*******************999999************************** PP

                 SSHHHHHHHHTTSSSTT CS
  Helicase_C  95 rnvtsyiqriGRtgRag 111
                  +++ + +r GR+gRag
  KHJ31288.1 374 SDPKVFLHRCGRAGRAG 390
                 ***************97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.3e-05     0.083      23     146 ..      50     201 ..      25     229 .. 0.74
   2 ?   -2.9   0.3       1.7   5.9e+03      74      84 ..     563     573 ..     522     608 .. 0.54

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.3e-05
                 TTSEEEEEESTTSTHHHHH.HHHHHHH-S...........-EEEEESSHHHHHHHH......HHGGGGTGG....GEEEESSS-B--............ CS
      ResIII  23 rdkrglikmaTGtGKTlva.aklierllkkgkee......kflflvprkslleqtl......eefkkflseaykeigkkvsgdkkka...........k 97 
                 + k +++++ TG+GKT+ + + ++e+ll+  +e        +++l p+++l  q         +f   + ea ++ + + + ++ ++           +
  KHJ31288.1  50 GSKDVVVEAVTGSGKTFSYlIPVVEKLLRL-DEPikkhhiGAIILSPTRELATQIHsvllslLAFHGPSIEALNALSDEGKTRNTSEctvlpqlflggH 147
                 5678999***********988888888874.43456788899*************96665555555555555544444444444444666777777777 PP

                 ......-SEEEEEHHHHHHTH.............HHHTTT-SEEEEETGGGTTS CS
      ResIII  98 ekdstnkkilvttiqsldadseee.....eeeseellrdrfdviiiDEaHrlga 146
                 +  +++ +i++ t   l  + + +     ++   +  +++f+v++ DEa rl +
  KHJ31288.1 148 ATPAHDLSIFLKTSPNLIIATPGRlldllSSPYVHCPQSSFEVLVLDEADRLLD 201
                 777888888888888888888777887777777788888888999999988766 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.7
                 GGGGTGG.... CS
      ResIII  74 fkkflseayke 84 
                 ++++ ++ +++
  KHJ31288.1 563 VREMRENRREK 573
                 22222222222 PP

>> DUF4019  Protein of unknown function (DUF4019)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   4.6   2.4e-05     0.085       6      61 ..     529     586 ..     523     594 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.4e-05
     DUF4019   6 lelvDagkyeesWeeasalfkkavteeew..ekalkavraplGavksRklasaeears 61 
                 l+++D+ k ++sW+  +++++k+ + e+w  +++++++r++  + k+Rk+ + ++ar 
  KHJ31288.1 529 LAALDKSKEKQSWNGGDEMMQKRKKIEAWslKNEVREMRENRREKKRRKVETKRKARM 586
                 7889*******************99999944589***************999888774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (616 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1437  (0.0801495); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 4169.77
//
Query:       KHJ31289.1  [L=423]
Description: putative 26s proteasome non-atpase regulatory subunit 11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.1e-43  147.4   0.2    2.1e-43  147.4   0.2    2.3  3  RPN6_N        26S proteasome regulatory subunit RPN6 N-termin
    4.2e-19   69.0   0.3    1.2e-18   67.6   0.0    1.9  2  PCI           PCI domain
    4.1e-10   39.2   0.2    1.4e-09   37.5   0.2    2.0  1  RPN6_C_helix  26S proteasome subunit RPN6 C-terminal helix do
    1.1e-05   25.1   1.1       0.54   10.4   0.0    4.4  4  TPR_7         Tetratricopeptide repeat
     0.0002   20.9   5.1     0.0018   17.8   1.3    2.4  2  TPR_MalT      MalT-like TPR region
    0.00075   19.7   9.5        1.8    8.9   0.5    4.6  4  TPR_12        Tetratricopeptide repeat
     0.0028   17.3   0.1     0.0028   17.3   0.1    2.2  3  DDRGK         DDRGK domain
  ------ inclusion threshold ------
      0.015   15.1   2.1         31    4.6   0.0    4.5  4  TPR_1         Tetratricopeptide repeat
      0.051   13.4   1.0       0.21   11.4   0.2    2.4  2  DUF2153       Uncharacterized protein conserved in archaea (D
      0.088   13.2   1.3       0.46   10.9   0.7    2.3  2  DUF3496       Domain of unknown function (DUF3496)
       0.11   12.8   2.1         36    4.9   0.1    4.9  5  TPR_8         Tetratricopeptide repeat
          4    8.1   8.7       0.32   11.6   0.5    2.8  2  DUF4398       Domain of unknown function (DUF4398)


Domain annotation for each model (and alignments):
>> RPN6_N  26S proteasome regulatory subunit RPN6 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.4   0.2   1.4e-46   2.1e-43       1     117 []      12     129 ..      12     129 .. 0.98
   2 ?   -2.5   0.1       4.3   6.4e+03      40      62 ..     132     154 ..     131     165 .. 0.68
   3 ?   -2.0   0.1       3.1   4.6e+03      52      52 ..     274     274 ..     219     308 .. 0.57

  Alignments for each domain:
  == domain 1  score: 147.4 bits;  conditional E-value: 1.4e-46
      RPN6_N   1 Aeelaksdpkeaeelykeilskks.kedeealreqeqalleLgelyrdqkkaeeLaelikesrsflssiaKaKtaKlvrtLldlfskipnslelqievl 98 
                 A+++ +++ k+ae+ ++ei+s+++  ++++a+re+e+al++Lg+lyrdq+k+++L+eli++sr++lss+aKaKtaKlvr+Lldlf+ ipn+ ++qi v+
  KHJ31289.1  12 ARDVNQEKSKNAEARFQEIISQPPvVTSDAAVREYETALISLGQLYRDQEKPDQLVELITKSRDVLSSFAKAKTAKLVRQLLDLFHGIPNTIDIQIYVT 110
                 7888999*****************99999********************************************************************** PP

      RPN6_N  99 kesiewakeekriFLrqsL 117
                 k++i+wa++e+r FLrq+L
  KHJ31289.1 111 KSCIAWATSERRGFLRQNL 129
                 *****************98 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 4.3
      RPN6_N  40 eLgelyrdqkkaeeLaelikesr 62 
                 +L +ly ++++  +  +li++  
  KHJ31289.1 132 RLVNLYMQKSQYYDALSLINSLL 154
                 67778887777777777776654 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 3.1
      RPN6_N  52 e 52 
                 +
  KHJ31289.1 274 K 274
                 2 PP

>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       6.9     1e+04      53      63 ..     139     149 ..     120     179 .. 0.64
   2 !   67.6   0.0   7.8e-22   1.2e-18       2     103 ..     286     387 ..     285     389 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 6.9
                 HHHHCESEEEH CS
         PCI  53 qvskiyssisl 63 
                 q s++y  +sl
  KHJ31289.1 139 QKSQYYDALSL 149
                 44444444443 PP

  == domain 2  score: 67.6 bits;  conditional E-value: 7.8e-22
                 HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTTTE CS
         PCI   2 sysdllkalrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIrdgeirakidqesgi 100
                 +++++ +a  +++l++++++l  + +el  d++++ +l  L++ + e++l +v++++s++++ ++ak++ l++ +vE+ l+++I d+ i + +dq +g+
  KHJ31289.1 286 AMKAIARAHSNRSLEEYEKALGNFPRELGSDPFIRNHLRHLYDAMLEQNLTKVIEPFSRVEITHIAKMVSLDTLQVERKLSQMILDKMITGVLDQGAGC 384
                 79999********************************************************************************************** PP

                 EEE CS
         PCI 101 vvf 103
                 +++
  KHJ31289.1 385 LII 387
                 *97 PP

>> RPN6_C_helix  26S proteasome subunit RPN6 C-terminal helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.5   0.2   9.3e-13   1.4e-09       1      27 []     393     419 ..     393     419 .. 0.96

  Alignments for each domain:
  == domain 1  score: 37.5 bits;  conditional E-value: 9.3e-13
  RPN6_C_helix   1 kDktYeaALeTIknmgkVVDsLYeKAa 27 
                   +D++Y+aAL TI+ ++ VVD LY+++a
    KHJ31289.1 393 RDEGYDAALATIERLSSVVDVLYTNQA 419
                   5***********************986 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00036      0.54       1      24 [.      49      72 ..      49      84 .. 0.91
   2 ?   -1.5   0.1       2.3   3.4e+03       4      22 ..     132     150 ..     131     162 .. 0.74
   3 ?    1.2   0.1      0.31   4.6e+02       6      31 ..     215     240 ..     212     247 .. 0.78
   4 !    8.3   0.0    0.0017       2.5       3      35 ..     288     320 ..     286     321 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00036
       TPR_7  1 aLlnLarlysrlGdyeeAielyeq 24
                aL  L++ly+++ + ++++el ++
  KHJ31289.1 49 ALISLGQLYRDQEKPDQLVELITK 72
                7889*****************998 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 2.3
       TPR_7   4 nLarlysrlGdyeeAiely 22 
                 +L +ly +  +y +A++l 
  KHJ31289.1 132 RLVNLYMQKSQYYDALSLI 150
                 5778999988888888775 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.31
       TPR_7   6 arlysrlGdyeeAielyeqsLaltkd 31 
                 + l+ ++ d+ +A +++ ++L+   +
  KHJ31289.1 215 GKLHAEEKDFNTAFSYFIEALEGYHS 240
                 78999999***********8865444 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.0017
       TPR_7   3 lnLarlysr..lGdyeeAielyeqsLaltkdpeda 35 
                  ++ar++s+  l +ye+A++ + +  +l +dp+++
  KHJ31289.1 288 KAIARAHSNrsLEEYEKALGNFPR--ELGSDPFIR 320
                 689*****************9999..999998876 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   1.3   1.2e-06    0.0018     229     308 ..     115     195 ..      65     200 .. 0.89
   2 ?    4.4   0.1     0.013        20     128     201 ..     214     290 ..     205     355 .. 0.71

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.2e-06
    TPR_MalT 229 elpsdddnhflelelrn.larvllalgrydeAlellerLlkaaeelgrvrslieiliLqalalqaqgreeeAlaaLeqALe 308
                  + ++++  fl+++l++ l+ +++  ++y +Al+l+++Llk+ ++l     l+e+++L +++++ ++++ +  aaL+ A +
  KHJ31289.1 115 AWATSERRGFLRQNLEVrLVNLYMQKSQYYDALSLINSLLKELKRLDDKLVLVEVQLLESRVYHSLDNTSKGRAALTSART 195
                 567788889999999887****************************99999*************************99855 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.013
    TPR_MalT 128 ladllyEwndLeeAeqhlqeGie.lleq.l.epeaaldayvllarialaqGdleeAetllekaeelaresnfhvdwl 201
                  ++l+ E  d+ +A  +  e++e +  q   e+++++  y+ll++i l  Gd  + + + ++a + a ++   + ++
  KHJ31289.1 214 SGKLHAEEKDFNTAFSYFIEALEgYHSQdEtEKATSALQYMLLCKIMLNLGDDVNQLLTSKQAVKYAGKNLDAMKAI 290
                 5899************999998864433243667777799********99986655555555544444333334444 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0      0.02        31       4      32 ..      48      76 ..      45      95 .. 0.64
   2 !    8.9   0.5    0.0012       1.8       5      66 ..     129     188 ..     125     197 .. 0.88
   3 !    7.3   0.2    0.0038       5.7       7      41 ..     212     246 ..     206     289 .. 0.83
   4 ?    0.9   0.1      0.38   5.7e+02       8      25 ..     291     308 ..     284     313 .. 0.60

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.02
      TPR_12  4 talnnlaavlrrlgrydeAlellekalei 32
                tal  l++++r +++ d+  el  k++++
  KHJ31289.1 48 TALISLGQLYRDQEKPDQLVELITKSRDV 76
                44555666666666666665555555555 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0012
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAle 66 
                 + ++l +++++  +y +Al+l +  l   +rl  +d++ +++++   +r+y+ l+++ + ++
  KHJ31289.1 129 LEVRLVNLYMQKSQYYDALSLINSLLKELKRL--DDKLVLVEVQLLESRVYHSLDNTSKGRA 188
                 667899**************************..******************9999877555 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0038
      TPR_12   7 nnlaavlrrlgrydeAlellekaleiarrllGpdh 41 
                  + + ++++ +++  A++++ +ale + +  ++++
  KHJ31289.1 212 LQSGKLHAEEKDFNTAFSYFIEALEGYHSQDETEK 246
                 5668889999***************9977744443 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.38
      TPR_12   8 nlaavlrrlgrydeAlel 25 
                  +a+  r l++y++Al +
  KHJ31289.1 291 ARAHSNRSLEEYEKALGN 308
                 455555556666666554 PP

>> DDRGK  DDRGK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.2      0.83   1.2e+03      55      81 ..       7      33 ..       3      78 .. 0.69
   2 ?   -2.9   0.0       2.9   4.4e+03      70      98 ..     219     247 ..     213     261 .. 0.64
   3 !   17.3   0.1   1.9e-06    0.0028      99     149 ..     328     380 ..     267     394 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.83
                XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       DDRGK 55 kkeeeerkkeeekerkeqeeyeklkse 81
                +k e+ r  ++ek + +++ ++++ s+
  KHJ31289.1  7 NKREIARDVNQEKSKNAEARFQEIISQ 33
                455555555556666666666655554 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.9
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       DDRGK  70 keqeeyeklksefvveeegtekesaeeee 98 
                  e+++++   s f+   eg +++++ e++
  KHJ31289.1 219 AEEKDFNTAFSYFIEALEGYHSQDETEKA 247
                 57777777777777777777776666644 PP

  == domain 3  score: 17.3 bits;  conditional E-value: 1.9e-06
                 X..HHHHHHHHHHH-SEE-HHHHHHHH-S-HHHHHHHHHHHHHHSSS-EEE-T CS
       DDRGK  99 k..lleefinyikekKvvlleelavkfklktqevierikeLeeqgsltGvlDd 149
                    l +++++ i+    v+++++a   +l+t +v  ++ ++  ++++tGvlD 
  KHJ31289.1 328 DamLEQNLTKVIEPFSRVEITHIAKMVSLDTLQVERKLSQMILDKMITGVLDQ 380
                 14477889999999999**********************************96 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.021        31       3      19 ..      49      65 ..      48      65 .. 0.91
   2 ?    0.9   0.2       0.3   4.4e+02       9      21 ..     135     147 ..     135     151 .. 0.91
   3 ?    2.3   0.0      0.11   1.7e+02       8      29 ..     215     236 ..     214     236 .. 0.92
   4 ?    2.6   0.0      0.09   1.3e+02       7      21 ..     292     306 ..     290     309 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.021
                HHHHHHHHHHHTT-HHH CS
       TPR_1  3 alynlGnayfklgkyde 19
                al  lG++y+ ++k+d+
  KHJ31289.1 49 ALISLGQLYRDQEKPDQ 65
                7889**********996 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.3
                 HHHHHTT-HHHHH CS
       TPR_1   9 nayfklgkydeAl 21 
                 n+y+++ +y +Al
  KHJ31289.1 135 NLYMQKSQYYDAL 147
                 79**********8 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.11
                 HHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   8 GnayfklgkydeAleyyekALe 29 
                 G ++ + ++++ A  y+ +ALe
  KHJ31289.1 215 GKLHAEEKDFNTAFSYFIEALE 236
                 6788999*************98 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.09
                 HHHHHHHTT-HHHHH CS
       TPR_1   7 lGnayfklgkydeAl 21 
                 +++  ++l++y++Al
  KHJ31289.1 292 RAHSNRSLEEYEKAL 306
                 67888999******8 PP

>> DUF2153  Uncharacterized protein conserved in archaea (DUF2153)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.1   1.6e+03      10      44 ..      47      82 ..      40      94 .. 0.70
   2 ?   11.4   0.2   0.00014      0.21      35     111 ..     295     371 ..     265     378 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.1
     DUF2153 10 kelletlkkvekkveeaDRL.dlilasraafqhmmr 44
                ++ l +l +  ++ e+ D L +li++sr +++  ++
  KHJ31289.1 47 ETALISLGQLYRDQEKPDQLvELITKSRDVLSSFAK 82
                555666667777777777765788888888776554 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00014
     DUF2153  35 sraafqhmmrtlkaFdqWL.qdPviishmpremLldvketlreilekllelDieHtsevrelleklskegklnpllal 111
                 s   ++   ++l +F + L  dP+i +h+ +     ++++l++++e + +++i H +++   l++l+ e kl +++  
  KHJ31289.1 295 SNRSLEEYEKALGNFPRELgSDPFIRNHLRHLYDAMLEQNLTKVIEPFSRVEITHIAKMVS-LDTLQVERKLSQMILD 371
                 4456777778888887777579*******988888999********************986.799******9998865 PP

>> DUF3496  Domain of unknown function (DUF3496)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.7   0.00031      0.46      30      90 ..     136     195 ..     128     202 .. 0.87
   2 ?   -0.8   0.0       1.3     2e+03      15      36 ..     284     305 ..     276     313 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00031
     DUF3496  30 LEkykqlyleelkvrksLsnklnktnerLaevstkllvekeqnrsllstlttrpvlespcv 90 
                 L   k +y  +l + +sL ++l++ + +L  v+ +ll  +    sl +t++ r +l s ++
  KHJ31289.1 136 LYMQKSQYYDALSLINSLLKELKRLDDKLVLVEVQLLESR-VYHSLDNTSKGRAALTSART 195
                 5667999****************************96555.79999999999999988765 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.3
     DUF3496  15 lskmKtsqedsnkteLEkykql 36 
                 l  mK+  +   +  LE+y+++
  KHJ31289.1 284 LDAMKAIARAHSNRSLEEYEKA 305
                 667999888888999****986 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.16   2.4e+02       3      19 ..      49      65 ..      47      73 .. 0.80
   2 ?   -0.9   0.1       1.8   2.7e+03       8      21 ..     134     147 ..     131     156 .. 0.64
   3 ?   -2.4   0.0       5.2   7.7e+03       8      24 ..     174     190 ..     168     193 .. 0.74
   4 ?    4.9   0.1     0.024        36       7      29 ..     214     236 ..     212     236 .. 0.91
   5 ?   -0.5   0.0       1.4     2e+03      19      28 ..     297     306 ..     291     310 .. 0.65

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.16
                HHHHHHHHHHHTT-HHH CS
       TPR_8  3 ayynlgsiylklgdyee 19
                a+  lg++y+++++ ++
  KHJ31289.1 49 ALISLGQLYRDQEKPDQ 65
                6789*******999887 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.8
                 HHHHHHTT-HHHHH CS
       TPR_8   8 gsiylklgdyeeAk 21 
                  ++y+++ +y  A 
  KHJ31289.1 134 VNLYMQKSQYYDAL 147
                 56677766665554 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 5.2
                 HHHHHHTT-HHHHHHHH CS
       TPR_8   8 gsiylklgdyeeAkeyy 24 
                 +++y++l +  +  +++
  KHJ31289.1 174 SRVYHSLDNTSKGRAAL 190
                 78999999988877766 PP

  == domain 4  score: 4.9 bits;  conditional E-value: 0.024
                 HHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   7 lgsiylklgdyeeAkeyyekale 29 
                  g+++ + +d++ A +y+ +ale
  KHJ31289.1 214 SGKLHAEEKDFNTAFSYFIEALE 236
                 5899*****************97 PP

  == domain 5  score: -0.5 bits;  conditional E-value: 1.4
                 HHHHHHHHHH CS
       TPR_8  19 eAkeyyekal 28 
                  + e yekal
  KHJ31289.1 297 RSLEEYEKAL 306
                 4556666666 PP

>> DUF4398  Domain of unknown function (DUF4398)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.5   0.00021      0.32       7      57 ..     187     236 ..     181     252 .. 0.84
   2 ?    0.9   0.3      0.47     7e+02      28      46 ..     285     303 ..     265     306 .. 0.52

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00021
     DUF4398   7 raaleaAraagaeeyApaeleeAreaLaqAeaamaekdyeeAdhlaylAer 57 
                 raal++Ar++ a+ y p  l +A+  L+ ++  ++ekd  +A  +  +A +
  KHJ31289.1 187 RAALTSARTSAASVYTPP-LLQAELDLQSGKLHAEEKDFNTAFSYFIEALE 236
                 9****************9.*************999****999999999987 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.47
     DUF4398  28 eAreaLaqAeaamaekdye 46 
                 +A +a+a+A +  + ++ye
  KHJ31289.1 285 DAMKAIARAHSNRSLEEYE 303
                 3444444444433333443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       957  (0.0533772); expected 358.6 (0.02)
Passed bias filter:                      608  (0.0339115); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 2971.17
//
Query:       KHJ31290.1  [L=220]
Description: putative phosphatidate cytidylyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       343  (0.019131); expected 358.6 (0.02)
Passed bias filter:                      185  (0.0103185); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.43
# Mc/sec: 1553.29
//
Query:       KHJ31291.1  [L=1049]
Description: putative oxoglutarate dehydrogenase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-64  215.9   0.0      5e-64  215.2   0.0    1.4  1  Transket_pyr     Transketolase, pyrimidine binding domain
    9.8e-58  195.5   0.0    1.5e-57  194.8   0.0    1.2  1  E1_dh            Dehydrogenase E1 component
      4e-55  185.7   0.1    6.7e-55  185.0   0.1    1.4  1  OxoGdeHyase_C    2-oxoglutarate dehydrogenase C-terminal
    5.6e-18   64.2   0.7    5.6e-18   64.2   0.7    1.8  2  2-oxogl_dehyd_N  2-oxoglutarate dehydrogenase N-terminus
  ------ inclusion threshold ------
      0.076   12.8   0.0       0.22   11.3   0.0    1.8  1  GYF_2            GYF domain 2


Domain annotation for each model (and alignments):
>> Transket_pyr  Transketolase, pyrimidine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.2   0.0   1.4e-67     5e-64       2     178 .]     672     884 ..     671     884 .. 0.99

  Alignments for each domain:
  == domain 1  score: 215.2 bits;  conditional E-value: 1.4e-67
                   EEEHHHHHHHHHHHHHCTTTTEEEEESSTHHHHTTCHCCHHEGGT................TEGEEE--S-HHHHHHHHHHHHHHCT.TEEEEEEEE CS
  Transket_pyr   2 kiawrkaeaealaellkedpevvligaDvaggtfsvrkgllhdqg................egrvidsgisEqavlgfavGaalagp.llviveaqF 81 
                    i+w++aea+a+++l+ e+++v+++g+Dv++gtfs+r+++ hdq+                ++ + +s++sE+++lgf++G++l++p +lvi+eaqF
    KHJ31291.1 672 NIDWSTAEALAFGSLVIEGHHVRVSGQDVERGTFSQRHAVFHDQEnektytplqhiskdqgKFVISNSSLSEFGALGFEYGYSLSSPnALVIWEAQF 768
                   59*********************************************************************************************** PP

                   HHHHGGGHHGGHHHHHCHHHHHT--EEEEESBSGGGSTTGTTTSBSSHHHHHHTSTT...................EEEE--SSHHHHHHHHHHHHH CS
  Transket_pyr  82 gdFangAqiyadqairsgeakgklkvgvvtrlpigvgedGpehqsaeleaflrlipg...................lkvvrPsdpaetkhllrrair 159
                   gdFan+Aq+++dq+i sge k+++++g+v+ lp+g++++Gpeh+s ++e++l+l+++                   +++++ ++p++++h+lrr+++
    KHJ31291.1 769 GDFANNAQCIIDQFIASGEVKWMQRSGLVMSLPHGYDGQGPEHSSGRMERYLQLCNEdprvfpslqklerqhqdcnMQIAYMTTPSNLFHILRRQMN 865
                   ************************************************************************************************* PP

                   SSS.SEEEEEE-SSEEC.T CS
  Transket_pyr 160 redrkPvvlrlpksllrhk 178
                   r++rkP++++++ksllrh+
    KHJ31291.1 866 RQFRKPLIIFFSKSLLRHP 884
                   *****************85 PP

>> E1_dh  Dehydrogenase E1 component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.8   0.0   4.3e-61   1.5e-57       6     295 ..     283     599 ..     278     603 .. 0.90

  Alignments for each domain:
  == domain 1  score: 194.8 bits;  conditional E-value: 4.3e-61
                 HHHHHHHHHHHHHTTSS-S-----TT-HHHHHHHHHTS-TT..SEEEES.S--HHHHHHTT--..HHHHHHHHTT-T....TTSSGTT-..-E..BT.. CS
       E1_dh   6 lrrvedaldalykrkkrigfyhlsagqealkvgiaaaleke..Dliite.YReagvllargls..leeilaeltgkv....kgkggsrh.elmyaek.. 92 
                 +  +e++l+++y + kr+g++ ++ + + +k +i+ +++ +  D++i + +R++ ++l ++++   e+i++e+ g +    +g+g++++  +m  e+  
  KHJ31291.1 283 SSSFENFLAIKYPNDKRFGLEGCETLVPGMKALIDRSVDFGvkDIVIGMpHRGRLNVLSNVVRkpNESIFSEFGGLAaaedEGSGDVKYhLGMNFERpt 381
                 5678999*******************************98778****999************98899*******9999999999999998777655412 PP

                 ....T..BEEE-SSTTTH..HHHHHHHHHHHH......HHTS---EEEEEEGGG.TT-HHHHHHHHHHHHTT--E...EEEEEEESEETTEEHHHH-S- CS
       E1_dh  93 ....esrilggngivgaq..vplvaGialaak......iegkkevailliGDgA.anqGdvyealnlaalwklpv...ifvveNNkygisTeaekasas 175
                      +++    ++++++   p+v G ++a +      +  + ++ +ll+GD+A a+qG vye l + +l+ + +   i+ v+NN++g++T+++ a+++
  KHJ31291.1 382 psgkRVQLSLVANPSHLEaeDPVVLGKTRAIQhynndeVTHTSAMGVLLHGDAAfAAQGVVYECLGFHSLPAYSTggtIHLVVNNQIGFTTDPRFARST 480
                 221133444444444444437777788888889999999999999*****************************99*********************** PP

                 --GGG..TTTTS-EEEEETTSHHHHHHHHHHHHHHHHTTT--EEEEEEE--SS-SSTTSHSHSSSHHHHHHHHHHHH-HHHHHHHHHHHTTSS-HHHHH CS
       E1_dh 176 keladrargvgipglrVdgnDplavyeAvkfAaeraregkgpllielvtYRyggHsesDdpstyrtreeveevrkkkdpiqrlkelLvkkgvvseeelk 274
                  + +d a+   +p+++V+++D++av ++++ Aa+++ +++++++i+lv+YR +gH+e D ps+++ + +++ +++++ +i ++ ++L + g  ++e  +
  KHJ31291.1 481 AYCTDIAKSIDAPIFHVNADDVEAVNYVCQLAADWRAAFQKDVVIDLVCYRKHGHNETDQPSFTQ-PLMYKRIQSHQSQIDIYINQLLEDGTFTKEDIE 578
                 *****************************************************************.********************************* PP

                 HHHHHHHHHHHHHHHHHHHS- CS
       E1_dh 275 eiekevrkeveeavkkaeskk 295
                 e +k v    ee ++k++++ 
  KHJ31291.1 579 EHRKWVWDTLEESFAKSKDYS 599
                 *****************9985 PP

>> OxoGdeHyase_C  2-oxoglutarate dehydrogenase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.0   0.1   1.9e-58   6.7e-55       2     152 .]     888    1039 ..     887    1039 .. 0.97

  Alignments for each domain:
  == domain 1  score: 185.0 bits;  conditional E-value: 1.9e-58
  OxoGdeHyase_C    2 SsleelaegtsFqrvledeeeea.lkepekvkrvvlcsGkvyydLlkerekkekekdvaivriEqlyPfpfeelkeelekYpnakelvWvQeEp 94  
                     S lee++ +++F+++++d+e+ + ++++++++r++lc+G+vy +L k+r +++  +++ai+riEql Pfp+++lke+l++Y nak++vW+QeEp
     KHJ31291.1  888 SLLEEFTGNSQFKWIIPDPEHGKsINDHSEIDRIILCTGQVYAALQKHRVDNNL-RNTAITRIEQLNPFPWQQLKENLDSYINAKTIVWCQEEP 980 
                     889****************99778999***********************9877.9************************************** PP

  OxoGdeHyase_C   95 kNqGawsfveprletvlkek.kkkkkklryvgreasaspAtGskkvhkkeqealleeaf 152 
                      N+Gawsf++pr+et+l+e+  +++k+++y+gr++sas+AtG k +h+ke++++l++af
     KHJ31291.1  981 LNAGAWSFMQPRIETLLNETnYHDRKHVMYAGRNPSASVATGLKVKHSKEEKEFLQTAF 1039
                     *******************8688999*******************************98 PP

>> 2-oxogl_dehyd_N  2-oxoglutarate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.2   0.7   1.6e-21   5.6e-18       1      40 [.      68     107 ..      68     108 .. 0.96
   2 ?   -2.9   0.2       1.5   5.5e+03      28      36 ..     513     521 ..     512     521 .. 0.84

  Alignments for each domain:
  == domain 1  score: 64.2 bits;  conditional E-value: 1.6e-21
  2-oxogl_dehyd_N   1 dsfLsgtnaaYiEelYeayleDPsSVdesWrayFknledg 40 
                      d+fLsg+ ++Yi+e+Y a++ DP+SV+ sW++yFkn+e+g
       KHJ31291.1  68 DNFLSGSASSYIDEMYMAWRTDPKSVHVSWQTYFKNIESG 107
                      68**********************************9987 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.5
  2-oxogl_dehyd_N  28 esWrayFkn 36 
                      + Wra F++
       KHJ31291.1 513 ADWRAAFQK 521
                      68*****85 PP

>> GYF_2  GYF domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   6.2e-05      0.22       8      37 ..     950     978 ..     945     980 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.2e-05
       GYF_2   8 qqqGPfsleeLkelaasgeitpdtlVWreG 37 
                 +q  Pf  ++Lke + s +i+++t VW++ 
  KHJ31291.1 950 EQLNPFPWQQLKENLDS-YINAKTIVWCQE 978
                 7888**********888.**********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1049 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.75u 0.27s 00:00:01.02 Elapsed: 00:00:00.44
# Mc/sec: 7204.70
//
Query:       KHJ31292.1  [L=197]
Description: hypothetical protein EV44_g3293 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       683  (0.0380947); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1443.11
//
Query:       KHJ31293.1  [L=1112]
Description: putative protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.1e-61  206.3   0.0    1.8e-60  204.5   0.0    2.0  1  Pkinase       Protein kinase domain
    5.6e-30  104.5   0.0    1.1e-29  103.5   0.0    1.5  1  Pkinase_Tyr   Protein tyrosine kinase
     0.0057   17.0   0.0      0.015   15.6   0.0    1.7  1  Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic d
  ------ inclusion threshold ------
      0.016   14.6   0.0      0.033   13.5   0.0    1.4  1  Kdo           Lipopolysaccharide kinase (Kdo/WaaP) family
      0.018   14.3   0.0      0.042   13.2   0.0    1.5  1  Kinase-like   Kinase-like
       0.21   11.5   0.0        2.5    7.9   0.0    2.1  2  APH           Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.5   0.0   6.1e-64   1.8e-60       1     264 []     266     550 ..     266     550 .. 0.90

  Alignments for each domain:
  == domain 1  score: 204.5 bits;  conditional E-value: 6.1e-64
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH..HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--H CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke..kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslse 97 
                 y+k++k+G+G+f++Vy +++k +g  +A K+++k++  k+     k+  E+ki++k+khpniv+++e ++ + +ly+++eyv+gg+l +++++ gsl+e
  KHJ31293.1 266 YNKVNKIGKGAFATVYLITSKYDGVPYAAKELEKRRFMKNGIldPKLDDEMKIMQKIKHPNIVEYIEHINWDAHLYIIMEYVPGGDLGNFISQYGSLQE 364
                 78999******************************99988777899***************************************************** PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE..TTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHH................TT...... CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLid..ekgelKitDFGlakelesssk.ltsfvgtseYlAPEvl................ke...... 171
                 +++k ia q+l++l+ylH+kg+ HrD+Kp+NiLi+  +  e+K+tDFGl+k +es+++ l++f+gt  Y+APEv                  +      
  KHJ31293.1 365 HNVKMIAVQLLSALRYLHQKGVTHRDIKPDNILISsySPLEVKLTDFGLSKMIESEETfLRTFCGTLLYCAPEVYseyrefdqngrrtlrvADkkslpp 463
                 ***********************************533444**************9999****************988888877665555500556777 PP

                 SCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 172 neyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilg.etkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 ++y+++vDvWsl+ +l+  l++ pp++ ++g++     ld    +++i+g + +    +  + se  +++++++l+ +p  R t+eel ++++l
  KHJ31293.1 464 QRYGNAVDVWSLAGVLFYSLCNAPPYPVQNGES----YLDL---LTRIMGqPLDIRPLQIANTSELGIRFIQSMLHNKPAYRATIEELQNSSWL 550
                 9***********99999999*******777766....3333...4467776677777888899*****************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.5   0.0   3.8e-33   1.1e-29       4     256 ..     269     545 ..     266     547 .. 0.82

  Alignments for each domain:
  == domain 1  score: 103.5 bits;  conditional E-value: 3.8e-33
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH...HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee...keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                   +k+G+Gaf++V+  t k     + v  a K l+++   ++     +l +e+kim+k+khpniv+++  +  + +l+i++eyv+gGdL +f+ +    
   KHJ31293.1 269 VNKIGKGAFATVYLITSK----YDGVPYAAKELEKRRFMKNgilDPKLDDEMKIMQKIKHPNIVEYIEHINWDAHLYIIMEYVPGGDLGNFISQY--G 360
                  579***********9999....889999*****66554444365789999*******************************************98..9 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE..TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE............. CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse..nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk............. 181
                  +l+ +++  +a+q+ ++++yL++k + Hrd+   N+L+s+     vk++DfGL++ ie++++    ++    + ++apE+ +e +             
   KHJ31293.1 361 SLQEHNVKMIAVQLLSALRYLHQKGVTHRDIKPDNILISSysPLEVKLTDFGLSKMIESEETFL--RTFCGTLLYCAPEVYSEYRefdqngrrtlrva 456
                  9**************************************854669************5555554..44566788********99999*********** PP

                  .........EEHHHHHHHH.HHHHHHHHTTSSGTTTTSHHHHHHHHH...HTTE...ES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 182 .........ftsksDvWsf.GvllwEiftlgespypglkneevlekl...kegk...rlekpekcpeelyelmkkcweedpeeRptfselv 256
                           +  + DvWs  Gvl + +++  + pyp  + e+ l+ l     +    r  + ++++e   +++++ ++++p+ R+t++el+
   KHJ31293.1 457 dkkslppqrYGNAVDVWSLaGVLFYSLCN--APPYPVQNGESYLDLLtriMGQPldiRPLQIANTSELGIRFIQSMLHNKPAYRATIEELQ 545
                  ******************87899999999..556665555555554421033221113344445555556778888888888888888876 PP

>> Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   5.1e-06     0.015      17      69 ..     103     159 ..      94     182 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 5.1e-06
                   EEEEEES-TT.-SEE-.--..TTS-TT-EEEEEETTEEEEEE-CESS--EETTEE-S CS
  Yop-YscD_cpl  17 gevviGsded.cDivL.sD..kevsrkhlkLeveeesvrledlgsrngllvngerve 69 
                   g +++G++++ cDi++ +D  k +s+ h++++++e ++ + +  s+ng++v+g    
    KHJ31293.1 103 GGFYFGRNPKrCDILIgKDasKRISNIHFRIYINEYGYLMLEDLSTNGTAVDGILLR 159
                   56789*********995577789****************************996554 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.1e-05     0.033      93     166 ..     341     411 ..     318     421 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.1e-05
         Kdo  93 lllterlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDl 166
                  +++e + g  dL +++ ++ +l+e+  +++  ++  + + lh+ gv H+d+ + nil+       +e+ l D+
  KHJ31293.1 341 YIIMEYVPG-GDLGNFISQYGSLQEHNVKMIAVQLLSALRYLHQKGVTHRDIKPDNILISSYS--PLEVKLTDF 411
                 567777655.68999999988888888889999999999********************9987..888888887 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.4e-05     0.042     139     189 ..     360     412 ..     352     453 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.4e-05
  Kinase-like 139 kkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgg..lmlggft 189
                   +l+++  +++ +ql+    +L++kg+ h ++++dn+l   + +  ++l++f+
   KHJ31293.1 360 GSLQEHNVKMIAVQLLSALRYLHQKGVTHRDIKPDNILISSYSPleVKLTDFG 412
                  57888888999****************************99987225777775 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.04   1.2e+02      35     106 ..     310     382 ..     268     383 .. 0.62
   2 ?    7.9   0.0   0.00085       2.5     163     181 ..     381     399 ..     361     416 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.04
                 HHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SS......HHHHHHHHHHHHHHHHHHCCHH CS
         APH  35 eeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllr......klsaaqlpellealgeflaalh 106
                 +++ +e ++++ +       P ++ + +  +   +l+ ++eyvpg +l +       l++   + ++ +l ++l+ lh
  KHJ31293.1 310 PKLDDEMKIMQKIK-----HPNIVEYIEHINWDAHLYIIMEYVPGGDLGNfisqygSLQEHNVKMIAVQLLSALRYLH 382
                 55555555555533.....3444444445555556999************9966655555555555555555555555 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00085
                 SS-EEEE-SS-SGGGEEEC CS
         APH 163 elptvllHgDlhpgNllvd 181
                   +++++H+D++p+N+l+ 
  KHJ31293.1 381 LHQKGVTHRDIKPDNILIS 399
                 5689*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.74u 0.31s 00:00:01.05 Elapsed: 00:00:00.46
# Mc/sec: 7337.46
//
Query:       KHJ31294.1  [L=585]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       659  (0.0367561); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4052.31
//
Query:       KHJ31295.1  [L=877]
Description: putative transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-66  221.1   0.0    1.9e-22   79.7   0.0    5.7  6  SNase           Staphylococcal nuclease homologue
    3.4e-24   85.2   0.0    8.7e-24   83.9   0.0    1.7  2  TUDOR           Tudor domain
    0.00066   19.0   0.0     0.0012   18.1   0.0    1.4  1  SMN             Survival motor neuron protein (SMN)
  ------ inclusion threshold ------
      0.094   13.2   0.7       0.27   11.7   0.1    2.1  2  Agenet          Agenet domain
        0.8   10.4   3.0        3.5    8.3   0.2    2.6  2  Cytochrom_B562  Cytochrome b562


Domain annotation for each model (and alignments):
>> SNase  Staphylococcal nuclease homologue
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00023      0.81      17     106 ..      32     139 ..      16     141 .. 0.74
   2 !   41.1   0.0   5.6e-14     2e-10       5     107 ..     199     306 ..     195     307 .. 0.95
   3 !   67.5   0.0   3.5e-22   1.3e-18       1     107 [.     343     453 ..     343     454 .. 0.90
   4 !   79.7   0.0   5.4e-26   1.9e-22       2     107 ..     511     615 ..     510     616 .. 0.96
   5 ?   -3.1   0.0         3   1.1e+04      46      79 ..     643     673 ..     629     680 .. 0.63
   6 !   15.3   0.0   5.9e-06     0.021      61     107 ..     814     870 ..     754     871 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00023
                 T............TTSTTHHHHHHHHHHHHHHCSSEEEEE-SSBSTTSEEEEEEEET.TEEHHHHHHHTTSSEE--.-BTT.....STTTHHHHHHHHH CS
       SNase  17 k............tvqpfgkeAkeflkklvlqkkvvvleldkkkDkygrllayvyln.kknineeLvkeGlArvye.vyek.....neekkkellkaee 96 
                 +             ++ +++e+++ l++lv++k  + ++l +   +  r  + v l+ ++ + e++++ G  ++   + +k      +++ + l+++e+
  KHJ31295.1  32 HlaycasphfrkeGEESWAYESRDALRQLVVGKVIQFNILYT-IPSSKREYGLVSLQdGTRLPEKMLELGWVKLRDdAGKKedsaeIQQHIEILRAIEA 129
                 44444444444447799**************88877777766.7889999999*99999***********98865532222212334577888999*** PP

                 HHHHTT-GGG CS
       SNase  97 eAkkkrkglW 106
                 +A+++ +g+ 
  KHJ31295.1 130 KARSEHLGMF 139
                 ******9996 PP

  == domain 2  score: 41.1 bits;  conditional E-value: 5.6e-14
                 TTEE-STSSBTTT......TTSTTHHHHHHHHHHHHHHCSSEEEEE-SSBSTTSEEEEEEEETTEEHHHHHHHTTSSEE---BTT.STTTHHHHHHHHH CS
       SNase   5 vgidaPetakpkk......tvqpfgkeAkeflkklvlqkkvvvleldkkkDkygrllayvylnkknineeLvkeGlArvyevyek.neekkkellkaee 96 
                 +gi+aP t + ++        +++g+eAk+f+++++lq++v+v++l+     ++ l+a++   + +i++ L+++GlAr + ++++   ++ + l++ae+
  KHJ31295.1 199 AGIRAPNTDRINSstnqlvSGEEYGNEAKDFVEERLLQRTVKVDILGL--SPQNLLIASIRHPRGSIAKFLLEAGLARCADFHSTlLGTEMAPLREAEK 295
                 79*******999999999999***************************..99999****************************99899999******** PP

                 HHHHTT-GGGC CS
       SNase  97 eAkkkrkglWs 107
                 +A+ ++ gl +
  KHJ31295.1 296 KAQLAKSGLYK 306
                 ********976 PP

  == domain 3  score: 67.5 bits;  conditional E-value: 3.5e-22
                 EEEETTEE-STSSBTTTTTSTTHHHHHHHHHHHHHHCSSEEEEE-S..SBSTTS.EEEEEEEETTEEHHHHHHHTTSSEE--.-BTT..STTTHHHHHH CS
       SNase   1 kvrLvgidaPetakpkktvqpfgkeAkeflkklvlqkkvvvleldk..kkDkyg.rllayvylnkknineeLvkeGlArvye.vyek..neekkkellk 93 
                 +++L++i+ P+  +p +   pf +eAkefl+k++++k+ ++ ++++  ++D+y+ + +a+v ln+kni + +v+eG A+v++  +++  +  +++ell 
  KHJ31295.1 343 RISLSSIRGPRPTDPAE--SPFRDEAKEFLRKRLIGKNIRMSIDGSrpATDEYNsKDVATVTLNNKNIGLIMVQEGWASVIRhRRDDtdRAPNYDELLT 439
                 699*********97766..************************99999888886378***********************9954333578899****** PP

                 HHHHHHHTT-GGGC CS
       SNase  94 aeeeAkkkrkglWs 107
                 a+e+Ak+++kg+Ws
  KHJ31295.1 440 AQEKAKEDKKGMWS 453
                 *************8 PP

  == domain 4  score: 79.7 bits;  conditional E-value: 5.4e-26
                 EEETTEE-STSSBTTT.TTSTTHHHHHHHHHHHHHHCSSEEEEE-SSBSTTSEEEEEEEETTEEHHHHHHHTTSSEE---BTTSTTTHHHHHHHHHHHH CS
       SNase   2 vrLvgidaPetakpkk.tvqpfgkeAkeflkklvlqkkvvvleldkkkDkygrllayvylnkknineeLvkeGlArvyevyekneekkkellkaeeeAk 99 
                 + L+gi+aP++a++++ + +pfg+eA++ + k+++q++v++++ +   Dk g +++++++nk+++++ Lv+eG+A v+e+  +++ +  el +a++ A+
  KHJ31295.1 511 LVLCGIRAPRSARNPTeKSEPFGQEAHDLAIKRLTQRDVEINVHSL--DKVGGFIGELFINKESFSKILVEEGYAAVHEYSAEQTGNSSELIAAQRRAQ 607
                 679********98877689***************************..*******************************8888**************** PP

                 HTT-GGGC CS
       SNase 100 kkrkglWs 107
                 + rkg+W 
  KHJ31295.1 608 ESRKGIWT 615
                 *******7 PP

  == domain 5  score: -3.1 bits;  conditional E-value: 3
                 SSBSTTSEEEEEEEETTEEHHHHHHHTTSSEE-- CS
       SNase  46 kkkDkygrllayvylnkknineeLvkeGlArvye 79 
                 k  D+ + ++  +  ++ n++++++  G A + +
  KHJ31295.1 643 K--DYRDVMITHI-SENCNLKLQIIGTGTAALET 673
                 3..5444444443.45789999999999998554 PP

  == domain 6  score: 15.3 bits;  conditional E-value: 5.9e-06
                 T......TEEHHHHHHHTTSSEE--...-BTT.STTTHHHHHHHHHHHHHTT-GGGC CS
       SNase  61 n......kknineeLvkeGlArvye...vyek.neekkkellkaeeeAkkkrkglWs 107
                          +in e+v +G A+v +   ++e+   +  k l++ eeeA + r+glW+
  KHJ31295.1 814 PnyseklTDSINTEMVAAGHAMVPTklkAWERsFGDVLKTLREKEEEAIQSRRGLWE 870
                 1455566789***********996532245554678899*****************7 PP

>> TUDOR  Tudor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       3.6   1.3e+04       4      24 ..     482     503 ..     480     510 .. 0.76
   2 !   83.9   0.0   2.4e-27   8.7e-24       2     118 ..     641     764 ..     640     767 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 3.6
                 CGEEEEEEEEEEETTEEEE.EE CS
       TUDOR   4 dktievvvsaiespskfyi.qp 24 
                 +k+i +vv +++s s+f+i  p
  KHJ31295.1 482 QKKIPAVVDYVKSGSRFVIlIP 503
                 5788999999999999999433 PP

  == domain 2  score: 83.9 bits;  conditional E-value: 2.4e-27
                 GCCGEEEEEEEEEEETTEEEE.EEGGHHHHHHHHHHHHHHHHTSSCC..TCSSS--TT-EEEEEETTTTEEEEEEE.EEECTTTEEEEEETTTSBEEEE CS
       TUDOR   2 pedktievvvsaiespskfyi.qpkeqskkleklteelqeyyaskkk..aellapavgegcvavfsedgkwyRAki.teslddqkveVlfiDyGntetv 96 
                 +e+++ +v++++i ++++      +  +++le+++++ +++++++++    + +p+ g+ ++a+fs dg+wyRA+i  +++  +++eV++iDyGn+e++
  KHJ31295.1 641 REKDYRDVMITHISENCNLKLqIIGTGTAALETMMSQFRSFHSNPANskGLPGPPKTGDYVAAKFSADGQWYRARIrSNDRVTKEAEVVYIDYGNSEKI 739
                 6899****************988999*********************8666778********************************************* PP

                 EGGGEEE--.GGGCS..S-BSSEEE CS
       TUDOR  97 pvsdlrelp.selee..lppqaikc 118
                 p+s lr+l+ ++++   l+pqa  +
  KHJ31295.1 740 PWSSLRPLSqEQFSPqkLRPQARDA 764
                 *********8888766688888665 PP

>> SMN  Survival motor neuron protein (SMN)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   3.4e-07    0.0012      70     124 ..     696     750 ..     682     764 .. 0.86

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 3.4e-07
         SMN  70 kvgdscnavwsedgnvypatiasidakkgtcvvvytgygneeeqnladllteasd 124
                 k gd   a +s dg+ y a i s d+      vvy +ygn+e+   + l++ +++
  KHJ31295.1 696 KTGDYVAAKFSADGQWYRARIRSNDRVTKEAEVVYIDYGNSEKIPWSSLRPLSQE 750
                 689************************99*************9999998876554 PP

>> Agenet  Agenet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.9     1e+04      48      60 ..     341     354 ..     335     355 .. 0.82
   2 ?   11.7   0.1   7.4e-05      0.27      14      59 ..     708     747 ..     704     749 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.9
      Agenet  48 eEwvdasdiR.Plp 60 
                 e+++++s+iR P+p
  KHJ31295.1 341 EKRISLSSIRgPRP 354
                 678999****9998 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 7.4e-05
      Agenet  14 rGaWfrAtilkv.kegdkylVeYddlddddgskpleEwvdasdiRPl 59 
                 +G W+rA i +  +  ++++V Y d      ++   E++++s++RPl
  KHJ31295.1 708 DGQWYRARIRSNdRVTKEAEVVYID-----YGN--SEKIPWSSLRPL 747
                 799*********7344466666666.....333..58*********7 PP

>> Cytochrom_B562  Cytochrome b562
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.2   0.00098       3.5      16      54 ..     108     146 ..     102     151 .. 0.89
   2 ?    1.4   0.2      0.14   5.1e+02      26      76 ..     431     481 ..     416     493 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00098
  Cytochrom_B562  16 vakaddaeelkkalkelraaaedakeatpsklekdseeq 54 
                     + k +d++e++++++ lra++++a+++    +++ds++ 
      KHJ31295.1 108 AGKKEDSAEIQQHIEILRAIEAKARSEHLGMFQNDSKQI 146
                     67999***********************99999988765 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.14
  Cytochrom_B562  26 kkalkelraaaedakeatpsklekdseeqkdYqeGldklidqldkaealak 76 
                     + + +el +a e+ake +     ++s++ k++ +  ++l+++  ++ al  
      KHJ31295.1 431 APNYDELLTAQEKAKEDKKGMWSGSSSKAKQFVDVSETLQKAKFQIAALQR 481
                     556678889999999999988888888888887766666665555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (877 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.26s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 6127.66
//
Query:       KHJ31296.1  [L=740]
Description: putative ribosome assembly protein noc2 nucleolar complex protein 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   2.4e-126  421.0   0.1   2.4e-126  421.0   0.1    2.0  2  Noc2           Noc2p family
  ------ inclusion threshold ------
      0.056   12.9   2.1       0.32   10.4   0.0    2.5  2  EST1_DNA_bind  Est1 DNA/RNA binding domain


Domain annotation for each model (and alignments):
>> Noc2  Noc2p family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.6   3.4         2   1.8e+04     239     285 ..       9      53 ..       3      58 .. 0.62
   2 !  421.0   0.1  2.7e-130  2.4e-126       2     297 ..     385     693 ..     384     695 .. 0.99

  Alignments for each domain:
  == domain 1  score: -5.6 bits;  conditional E-value: 2
        Noc2 239 kneklrkqlkqLvekleenskfieekRekvefspkdreeveafekel 285
                 +++  ++qlk  +e+ ++ +k+  ++R++++++ k +++ +++ek+ 
  KHJ31296.1   9 TRKYEKNQLKDALERRKAGAKI--KQRQQIKLKRKAKNAEKSYEKNE 53 
                 4444455555555555555554..78888888888888888888664 PP

  == domain 2  score: 421.0 bits;  conditional E-value: 2.7e-130
        Noc2   2 llelvlkkvYlalvknskftsvktlplinfmknsaveLygldeavsyqhafvyIrqLAihLRnalktkkkeayksvynWqfvhsldlWsrvlsaacsk. 99 
                 ++e+vlk+vY+ lv++s++t+++t+++in+mknsa+eL+g+d  v y ++f++IrqLAihLRn++++++ke++k+vynWq++hsld+Ws+vls++cs+ 
  KHJ31296.1 385 IRETVLKTVYQGLVRSSRSTTMHTIHGINLMKNSASELWGIDAPVGYATGFTFIRQLAIHLRNSITKNQKESFKTVYNWQYLHSLDFWSCVLSEHCSPl 483
                 6799*********************************************************************************************** PP

        Noc2 100 ......keselkpLiypLvqvilgaikLiptaryfPlrlhlirsLlrLsestgtfIPvaplllevLeskelkkkpkkkstlkpldfevtlkvpksylkt 192
                       keselkpLiyp vq++lga++Lipta yfPlr+hlirsLlrLs++tgt+IP+a+ llevL+s+e+k++pk+ s lkp++f++++kvpksyl+t
  KHJ31296.1 484 reaengKESELKPLIYPTVQITLGALRLIPTAMYFPLRFHLIRSLLRLSRATGTYIPLASSLLEVLNSNEMKNPPKS-SVLKPIEFALNYKVPKSYLHT 581
                 *****************************************************************************.9******************** PP

        Noc2 193 rvyqdglieevvellleylallsksiaFPElvlpvvvqLkrflkstk.......neklrkqlkqLvekleenskfieekRekvefspkdreeveafeke 284
                 rvyq+++ e+vvel++e++++++++ia+PEl+lpvvv+Lkr+lk++k       n+k+++++  L++kle+nsk+ieekR+kv+f+p++r  v++f+k 
  KHJ31296.1 582 RVYQENIGEQVVELFAEFFVIWCTNIAYPELALPVVVMLKRWLKDVKcrnkgnkNAKVSNSIALLIQKLETNSKWIEEKRAKVDFAPNNRVGVDEFLKG 680
                 *********************************************9999***99999****************************************** PP

        Noc2 285 lksektPlgkyvk 297
                 ++ ektPlg++v 
  KHJ31296.1 681 FDLEKTPLGAFVM 693
                 ***********97 PP

>> EST1_DNA_bind  Est1 DNA/RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.5     0.027   2.4e+02     138     220 ..     230     318 ..     179     369 .. 0.61
   2 ?   10.4   0.0   3.6e-05      0.32     174     228 ..     431     487 ..     399     496 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.027
                    HHHHHHHHHHHHHHHHH-S--SXXXXXXXXXXXXXHHHHHHHHHHHHHHHTGGGTTT............-SS-THHHHHHHHHHHHHTT- CS
  EST1_DNA_bind 138 lllkmllinifaienlkdkssgeeskektllllrlalrfifelfglllekvetlealk.......rdketpsatrvLpalrvylswlksn 220
                     + +++l + +a ++++d+++++ s + +  +  + +  +++++  +l++  + ++++       ++k+  ++t +L +  ++ + l sn
     KHJ31296.1 230 AMRQVVLAFRAAAHVNEDENKHKYSISSPD-VYHNLVISALKYIPIVLQHHLPVKESSgksrvstESKKFKTLTPLLKSHSISINHLLSN 318
                    444666666666667777777765554444.45555556677777777777776666556665553333333333333333333333333 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 3.6e-05
                    HHHHHHHHHHHHHHTGGGTTT.......-SS-THHHHHHHHHHHHHTT-HHHHHHHH CS
  EST1_DNA_bind 174 lrfifelfglllekvetlealk..rdketpsatrvLpalrvylswlksnkslledve 228
                    +++ f+++ +l+ ++   ++++  ++ +t +++++L +l  ++++l++++s l+ +e
     KHJ31296.1 431 YATGFTFIRQLAIHLRNSITKNqkESFKTVYNWQYLHSLDFWSCVLSEHCSPLREAE 487
                    5677888888888888888777555778999*******************9996555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (740 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1527  (0.0851693); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 5068.79
//
Query:       KHJ31297.1  [L=616]
Description: putative r3h domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-11   43.9   0.0    4.6e-11   42.5   0.0    1.7  1  R3H       R3H domain
    0.00012   21.8   0.0    0.00031   20.5   0.0    1.7  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
  ------ inclusion threshold ------
       0.11   12.7   0.0        0.2   11.9   0.0    1.4  1  RRM_2     RNA recognition motif 2


Domain annotation for each model (and alignments):
>> R3H  R3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   7.7e-15   4.6e-11       9      59 ..     330     382 ..     326     383 .. 0.89

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 7.7e-15
                 HHHHHHH-S.--EEE---.--SHHHHHHHHHHHHSSEEEEEE--SS-SEEEEE CS
         R3H   9 klaefvkdt.grslefpp.mssyeRriiHelaeaygleseSvGeepkRrvvvt 59 
                 +++ f kd+ + sl fp   s+  Rr+iH++a++ gle++S+Ge++ R+v + 
  KHJ31297.1 330 DIVVFKKDPnRDSLIFPAsISPADRRQIHTMAHHLGLEHRSQGEGEGRCVQIL 382
                 677888887357******88******************************986 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   5.1e-08   0.00031       1      70 []     175     245 ..     175     245 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 5.1e-08
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 l+++n+p+++++e++  ++ +          +    g  +g af +F s+e+ +  +e++ng +l+gr+l+
  KHJ31297.1 175 LVIKNIPFSIKKEQMLSMMTDLKVPLPYAFNYHfDGGVFRGLAFANFSSPEETKIVIENMNGLELNGRKLR 245
                 67888888888888888888866665555555567999******************************986 PP

>> RRM_2  RNA recognition motif 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.3e-05       0.2       2      69 ..     173     238 ..     172     248 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.3e-05
       RRM_2   2 ttlliknipnkyt.kkmllaaideknkgtydflylpidfknkcnvgyafinlvepkkivafqkafngkk 69 
                 t+l+iknip     ++ml  + d k    y f y    f      g af n+ +p+++  + + +ng +
  KHJ31297.1 173 TALVIKNIPFSIKkEQMLSMMTDLKVPLPYAFNY---HFDGGVFRGLAFANFSSPEETKIVIENMNGLE 238
                 789******9876268999999*********988...69999999***********9999999988865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (616 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       371  (0.0206927); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4762.41
//
Query:       KHJ31298.1  [L=406]
Description: putative serine threonine-protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-72  243.1   0.0    4.1e-72  242.7   0.0    1.2  1  Pkinase         Protein kinase domain
    3.8e-45  154.2   0.0      5e-45  153.8   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    1.9e-08   34.0   0.0    9.2e-08   31.7   0.0    1.9  2  Kinase-like     Kinase-like
    0.00066   19.1   0.1     0.0011   18.3   0.1    1.3  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0026   17.4   0.4      0.025   14.2   0.0    2.4  3  RIO1            RIO1 family
  ------ inclusion threshold ------
      0.015   14.3   3.4      0.035   13.0   3.4    1.7  1  Haspin_kinase   Haspin like kinase domain
      0.032   13.7   0.1       0.08   12.4   0.1    1.7  1  YrbL-PhoP_reg   PhoP regulatory network protein YrbL
       0.04   13.5   0.1       0.23   11.0   0.0    2.0  2  FTA2            Kinetochore Sim4 complex subunit FTA2
      0.084   11.6   0.4       0.13   11.0   0.4    1.3  1  Pkinase_fungal  Fungal protein kinase
      0.095   12.6   0.0       0.13   12.2   0.0    1.3  1  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.7   0.0   2.3e-75   4.1e-72       1     264 []     124     377 ..     124     377 .. 0.93

  Alignments for each domain:
  == domain 1  score: 242.7 bits;  conditional E-value: 2.3e-75
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslsee 98 
                 +e  + lG+G+fG+Vy a+e+++g i A+K++ k++ ++ k  k+v+rEi+i  +l+hpni++ly+ f+++++++l+le++ +gel ++l+++  ++e+
  KHJ31298.1 124 FEIGKPLGKGKFGRVYLARERTSGFICALKVLHKNELQQGKVeKQVRREIEIQSNLRHPNILQLYGHFHDSKRVFLILEFAGKGELYKHLRKENRFPEW 222
                 577899***************************99988877669******************************************************* PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH....TTSCBSHHHHHHHHHHHHHHHHHS CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvl....keneyskkvDvWslGvilyelltg 193
                 +a ++++q++++l+ylH+k++iHrD+KpeNiL+  +ge+Ki+DFG + ++ ++   ++++gt +Yl+PE++    ++n y++kvD+WslGv+ ye+l g
  KHJ31298.1 223 KAAQYIAQMAAALKYLHKKHVIHRDIKPENILVGIHGEIKISDFGWSVHAPNNR-RNTMCGTLDYLPPEMIkpgnHDNYYTEKVDLWSLGVLTYEFLVG 320
                 ***************************************************988.****************998667888******************* PP

                 S-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 194 kppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 + pf+   ++      ++q    ++i    + ++  ++ +s+eakdl+k+ll  dp+kR+  +++  hp++
  KHJ31298.1 321 EAPFE---DSP----VMTQ----RRIA---RAEMTIPNFVSPEAKDLIKRLLVLDPEKRIPLDQIQTHPWI 377
                 *****...332....2333....2222...3467788999******************************7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.8   0.0   2.8e-48     5e-45       2     257 ..     125     373 ..     124     374 .. 0.90

  Alignments for each domain:
  == domain 1  score: 153.8 bits;  conditional E-value: 2.8e-48
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH..HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee..keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkek 97 
                  e+gk lG+G+fG+V+ ++ +    ++   +a+K+l+++  ++   ++++ +e++i ++l+hpni++l+g   +++++++++e++ +G+L k+Lrk+  
   KHJ31298.1 125 EIGKPLGKGKFGRVYLARER----TSGFICALKVLHKNELQQGkvEKQVRREIEIQSNLRHPNILQLYGHFHDSKRVFLILEFAGKGELYKHLRKE-- 216
                  68999************999....8999*******6655444334789999********************************************8.. PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE....EEHHHHHHHH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk....ftsksDvWsf 191
                  +++   +  ++++q+A++++yL++k+++Hrd+   N+L+  +  +kisDfG + +       +++++    + +++pE++k ++    +t+k D Ws 
   KHJ31298.1 217 NRFPEWKAAQYIAQMAAALKYLHKKHVIHRDIKPENILVGIHGEIKISDFGWSVHA----PNNRRNTMCGTLDYLPPEMIKPGNhdnyYTEKVDLWSL 310
                  99***************************************************988....3344555667899*******97777777********** PP

                  HHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 192 GvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  Gvl++E +  ge p+++   ++  ++  ++ +++ p+ +++e ++l+k+ +  dpe+R  + ++++
   KHJ31298.1 311 GVLTYEFLV-GEAPFEDSPVMT--QRRIARAEMTIPNFVSPEAKDLIKRLLVLDPEKRIPLDQIQT 373
                  ******998.*****9976554..55667889***************************9999975 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.33   5.8e+02      17      58 ..     127     168 ..     123     184 .. 0.75
   2 !   31.7   0.0   5.1e-11   9.2e-08     141     288 .]     221     365 ..     206     365 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.33
  Kinase-like  17 gellkkgdrsvvfevkdqetgeplavkvfllpseaskkdler 58 
                  g++l+kg+++ v+++++   g   a+kv   ++    k  ++
   KHJ31298.1 127 GKPLGKGKFGRVYLARERTSGFICALKVLHKNELQQGKVEKQ 168
                  7899************99999999999877666444444444 PP

  == domain 2  score: 31.7 bits;  conditional E-value: 5.1e-11
  Kinase-like 141 letiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve..kgfaPpEllgsrggytrknktkmthkldaWql 236
                  +   a +++ +q+     +L++k ++h +++++n+l   +g +++ +f+  v a ++ + ++++    + PpE++   g    ++   +t k+d W l
   KHJ31298.1 221 EW-KAAQYI-AQMAAALKYLHKKHVIHRDIKPENILVGIHGEIKISDFGWSVHAPNNRR-NTMCgtLDYLPPEMIKP-G----NHDNYYTEKVDLWSL 310
                  33.344555.68888889*****************************************.9999344578*****98.3....37889********** PP

  Kinase-like 237 GlviyriwclklPltlateeakeewkfklck.kipekv....kaLlkkfLqlsqedR 288
                  G+  y     ++P++     + +     + +  ip++v    k L+k++L l+ e+R
   KHJ31298.1 311 GVLTYEFLVGEAPFEDSP-VMTQR-RIARAEmTIPNFVspeaKDLIKRLLVLDPEKR 365
                  *************97654.44443.23333336666663333567777777777766 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.1   6.2e-07    0.0011      98     163 ..     202     263 ..     190     279 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 6.2e-07
         Kdo  98 rlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwl 163
                 + +g  +L ++l+k ++++e + ++ + + +++ + lh+ +v H+d+ + nil+  ++    ei +
  KHJ31298.1 202 EFAGKGELYKHLRKENRFPEWKAAQYIAQMAAALKYLHKKHVIHRDIKPENILVGIHG----EIKI 263
                 46778889999999888999999******************************98887....4444 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.1     2e+03      26      54 ..      25      53 ..      22      58 .. 0.81
   2 ?   -0.2   0.0      0.35   6.2e+02       2      47 ..     138     184 ..     137     193 .. 0.78
   3 !   14.2   0.0   1.4e-05     0.025      79     159 ..     195     276 ..     189     281 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.1
                -HHHHCTTTSTTSTCG--GS-HHHHHHHH CS
        RIO1 26 kkrkkyvsgekrfkdrksktnprklvklw 54
                k+ k++++g+++f +  +++n+ +l k++
  KHJ31298.1 25 KTTKSKINGNPKFAHGSQTSNRTNLLKIA 53
                5689999*******998888888877765 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.35
                 EEEEEE.TTTEEEEEEEE-S---SS-HHHHCTTTSTTSTCG--GS-H CS
        RIO1   2 Vyhavs.edgkevaiKiyktstteFkkrkkyvsgekrfkdrksktnp 47 
                 Vy a++ ++g  +a+K+   + ++  k++k+v +e + +++  + n 
  KHJ31298.1 138 VYLARErTSGFICALKVLHKNELQQGKVEKQVRREIEIQSNLRHPNI 184
                 8888874445599***9999999999999999999987776666555 PP

  == domain 3  score: 14.2 bits;  conditional E-value: 1.4e-05
                 ETTEEEEE--EETTEEGGBHHHCG-..HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE--GTTEEETTSTT CS
        RIO1  79 krhvlvmefigedgvaapklkdvee..eeeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviIDvsQaveldhpn 159
                 kr  l++ef g +g  +++l++ ++  e +a+++ +++ ++  k +++ +++H D+   N+lv    ++ i D++ +v++ +++
  KHJ31298.1 195 KRVFLILEFAG-KGELYKHLRKENRfpEWKAAQYIAQMAAA-LKYLHKKHVIHRDIKPENILVGIHgEIKISDFGWSVHAPNNR 276
                 6678999***9.99999999999955566777777777775.556669***************98889*******999876655 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   3.4     2e-05     0.035     165     255 ..     173     270 ..       9     293 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2e-05
  Haspin_kinase 165 lllqdkvlkek.....pdfyseqqlflvlllkdkGtdLeev....klkswkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidl 251
                    + +q+++ + +       f +++++fl+l++  kG+  +++    ++ +wk a+ i  q+++ L+   +k    HRd++ +niLv  ++++ + d+
     KHJ31298.1 173 IEIQSNLRHPNilqlyGHFHDSKRVFLILEFAGKGELYKHLrkenRFPEWKAAQYIA-QMAAALKYLHKKH-VIHRDIKPENILVGIHGEIKISDF 266
                    3344444444466666788999*************9988886666788899999885.9999999999986.56*********************9 PP

  Haspin_kinase 252 klsR 255
                      s 
     KHJ31298.1 267 GWSV 270
                    8775 PP

>> YrbL-PhoP_reg  PhoP regulatory network protein YrbL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   4.5e-05      0.08     121     155 ..     224     258 ..     150     265 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.5e-05
  YrbL-PhoP_reg 121 taelkeaLdefleelldnhivtndlsakNivvkkn 155
                    +a++  ++ + l++l   h++ +d++++Ni+v+ +
     KHJ31298.1 224 AAQYIAQMAAALKYLHKKHVIHRDIKPENILVGIH 258
                    34788899999********************9865 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.36   6.5e+02      24      63 ..     124     168 ..     110     209 .. 0.70
   2 ?   11.0   0.0   0.00013      0.23     173     206 ..     223     256 ..     211     269 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.36
        FTA2  24 iefleyLgkglhsiVlkvkirgk..eYALKlFrfleaeele...e 63 
                 +e+ + Lgkg  ++V+ ++ r++  + ALK+  + e ++ +   +
  KHJ31298.1 124 FEIGKPLGKGKFGRVYLARERTSgfICALKVLHKNELQQGKvekQ 168
                 567789999999999999988886677999876665544434330 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00013
        FTA2 173 levsqlpkllrdlkklhklgIvvrDlkeenyidg 206
                 +  +++ ++   lk lhk ++++rD+k+en++ g
  KHJ31298.1 223 KAAQYIAQMAAALKYLHKKHVIHRDIKPENILVG 256
                 5678899***********************9865 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.4     7e-05      0.13     312     391 ..     228     297 ..      24     307 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 7e-05
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeH 391
                     +++  ++++ L+ k+ ++HrDi  +Nil+       + +  ++D+ + ++  + +++   ++  GTl ++  e++k ++H
      KHJ31298.1 228 IAQMAAALKYLH-KKHVIHRDIKPENILVG-----IHGEIKISDFGWSVHAPN-NRR---NTMCGTLDYLPPEMIKPGNH 297
                     5666789999**.***************98.....455666777777777774.222...24677777777777776666 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   7.2e-05      0.13     137     181 ..     218     256 ..     150     273 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 7.2e-05
                 CGCCTCCHHHHHHHHHHHHHHHH--SSS-EEEE-SS-SGGGEEEC CS
         APH 137 laselldlleeleeqvlaalaallpgelptvllHgDlhpgNllvd 181
                 + +e++      ++  +a++aa l    ++ ++H+D++p N+lv 
  KHJ31298.1 218 RFPEWKA-----AQ-YIAQMAAALKYLHKKHVIHRDIKPENILVG 256
                 3333333.....33.44444444444568**************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       691  (0.0385409); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 2631.43
//
Query:       KHJ31299.1  [L=233]
Description: putative peptidase m76 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-67  224.7   6.8      7e-67  224.5   6.8    1.1  1  Peptidase_M76  Peptidase M76 family
      0.001   18.9   0.5      0.001   18.9   0.5    2.1  2  SprT-like      SprT-like family
  ------ inclusion threshold ------
      0.019   15.3   0.1      0.033   14.5   0.1    1.4  1  Peptidase_M91  Effector protein


Domain annotation for each model (and alignments):
>> Peptidase_M76  Peptidase M76 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.5   6.8   1.2e-70     7e-67       1     171 []      53     229 ..      53     229 .. 0.97

  Alignments for each domain:
  == domain 1  score: 224.5 bits;  conditional E-value: 1.2e-70
  Peptidase_M76   1 ercekavdellkesptvkfllksieklgceldserikcepCdek.........qaggfspeegillcenrlrskehledtlahElvhayDdlrakv 87 
                    +rc+ ++d++l++sp+v f+ k+ie l+++++++++kc++C+++         q+ggfsp++gil+c+n++++k+h+edtlahE++ha+D+lr+k+
     KHJ31299.1  53 KRCNYYRDWCLTYSPIVIFMKKNIEALNGDINDKTVKCRRCPAWrdeegkwkrQSGGFSPDHGILICANEIQDKKHMEDTLAHEMIHAWDHLRWKI 148
                    69***************************************998999999999999**************************************** PP

  Peptidase_M76  88 dwsnlrhlACseiRAanlsGecrvsrelrrgrklfkltkqhqkCvrrrAilsveanpkckdkeeaekaveevfesCfkDtePfd 171
                    +w +lrh AC+eiRA+nlsGecr++re++++ +++++t+qhq+Cvr+rA++s+ +  +ckd+++a+++v+ev++sCf+Dt+Pfd
     KHJ31299.1 149 NWMDLRHNACAEIRASNLSGECRWTREFFKR-NNWSITQQHQECVRKRAVMSMLS--RCKDNTQATQIVNEVWDSCFNDTRPFD 229
                    ******************************8.58******************976..6***99********************7 PP

>> SprT-like  SprT-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.5   1.7e-07     0.001      45      78 ..     112     143 ..      19     158 .. 0.70
   2 ?   -0.6   0.1       0.2   1.2e+03      33      41 ..     167     184 ..     145     214 .. 0.64

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1.7e-07
   SprT-like  45 hhasIeLseklldsrsedrllntLaHElcHlalf 78 
                  ++ I + ++ +++  ++ +++tLaHE++H++ +
  KHJ31299.1 112 PDHGILICANEIQD--KKHMEDTLAHEMIHAWDH 143
                 44556665666666..79*************986 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.2
   SprT-like  33 aGranlkr.........a 41 
                  G++++ r          
  KHJ31299.1 167 SGECRWTReffkrnnwsI 184
                 566666663333333331 PP

>> Peptidase_M91  Effector protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.1   5.6e-06     0.033      66     109 ..     106     145 ..      72     161 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 5.6e-06
  Peptidase_M91  66 kekgegtdaeinynpafsseeegkegrPsavLyHElaHaydaln 109
                    +++g++ d  i +  +  ++    ++  + +L+HE++Ha+d+l+
     KHJ31299.1 106 QSGGFSPDHGILICANEIQD----KKHMEDTLAHEMIHAWDHLR 145
                    44444444444444443333....4555678**********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       746  (0.0416086); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1710.80
//
Query:       KHJ31300.1  [L=170]
Description: putative protein mitochondrial [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-17   61.9   6.5    1.6e-16   60.5   6.5    1.8  1  DUF1674   Protein of unknown function (DUF1674)
  ------ inclusion threshold ------
        4.1    5.5   8.3        5.5    5.1   8.3    1.2  1  SSP160    Special lobe-specific silk protein SSP160


Domain annotation for each model (and alignments):
>> DUF1674  Protein of unknown function (DUF1674)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.5   6.5   1.8e-20   1.6e-16       2      50 .]     117     170 .]     116     170 .] 0.95

  Alignments for each domain:
  == domain 1  score: 60.5 bits;  conditional E-value: 1.8e-20
     DUF1674   2 aeerpaaaaepapefegdvnpktgEigGpkgpEPtR......ygDWeykGrvsDF 50 
                 +e++p+ ++ ++pefegd np tgEigGp ++EP+R       gDW+y+Grv+DF
  KHJ31300.1 117 QELHPDIRRGAKPEFEGDRNPVTGEIGGP-KTEPVRwgsdgeRGDWSYNGRVTDF 170
                 589**************************.******98888889*********** PP

>> SSP160  Special lobe-specific silk protein SSP160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   8.3   0.00062       5.5     283     305 ..      78     100 ..      55     115 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.00062
      SSP160 283 anstssststststttststttt 305
                  n  sss+ststst+tststttt
  KHJ31300.1  78 INQESSSSSTSTSTSTSTSTTTT 100
                 45566666666666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       990  (0.0552178); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1264.46
//
Query:       KHJ31301.1  [L=712]
Description: putative tryptophan synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      5e-89  297.6   0.0    8.9e-89  296.8   0.0    1.4  1  Trp_syntA  Tryptophan synthase alpha chain
    6.4e-47  160.4   0.4    9.7e-47  159.8   0.4    1.2  1  PALP       Pyridoxal-phosphate dependent enzyme
      0.007   15.8   0.2      0.034   13.6   0.0    2.1  2  BtpA       BtpA family


Domain annotation for each model (and alignments):
>> Trp_syntA  Tryptophan synthase alpha chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  296.8   0.0   1.5e-92   8.9e-89       1     239 [.       8     251 ..       8     269 .. 0.94

  Alignments for each domain:
  == domain 1  score: 296.8 bits;  conditional E-value: 1.5e-92
                 HHHHHCTTB-EEEEEEETTSS-HHHHHHHHHHHHHCT-SSEEEE---S--TTS-HHHHHHHHCCCCTT--HHHHHHHHHHHHHHCSSS-EEEEE-CHHH CS
   Trp_syntA   1 faklkaenraafvpyvtagdpdleqsleilkalekagadviElGlpfsdPladGPvIqaanlraLakgvtlekvlelveevrkkevevPivlltylnlv 99 
                 f ++k+e+raaf++yvtag+p+l+++++il ale++gad+iElGl f+dP+adGP+Iq+an++aL++gvtl ++l++v+++r+k+++vP+v+++y n++
  KHJ31301.1   8 FDQCKRESRAAFITYVTAGFPKLNDTVDILLALEAGGADIIELGLVFTDPYADGPTIQKANTIALKNGVTLGSTLQMVKSAREKGLKVPVVFMGYWNVL 106
                 7899*********************************************************************************************** PP

                 CCC....-HHHHCHHHHHCTEEEEEETTSBCCCHHHHHHHHHHTT-EEEEEE-TTS-HHHHHHHHHH--S-EEEESTTC-SSTTSSB-TTHHHHHHHHH CS
   Trp_syntA 100 lsy....geerflaelkeagvdglivpDlPleeaeelveaakkkglelvflvapttsderlkevveqaegfvYvvsraGvTgaenavaaevdelverlk 194
                 lsy    g e+++ ++++agv+g+i++DlP+eea++++++a++ gl++++l+ap+t+ er++++++ a++fvYvvsr+GvTga  +++ ++ ++++r+k
  KHJ31301.1 107 LSYmdkhGGEKLISDCRKAGVNGFIIVDLPPEEATNFRKFASHGGLSYIPLIAPSTTTERMNHLCQLADSFVYVVSRMGVTGATGSLNPQLPKFLNRVK 205
                 98755557899**************************************************************************************** PP

                 HCT.SS-EEEESSS-SHHHHHHHHTT-SEEEE-HHHHHHHHCTTTS CS
   Trp_syntA 195 klt.avPvavGFGistkeqvkqvakvadGvivGSalvkkieeeaee 239
                 +++  vP+ vGFGist+e+ + + ++adGv++GS++v+++ ++  +
  KHJ31301.1 206 NASgGVPTVVGFGISTREHYQLISSIADGVVIGSQIVETLFKAPVN 251
                 **999*********************************99875444 PP

>> PALP  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.8   0.4   1.6e-50   9.7e-47       6     294 .]     360     683 ..     358     683 .. 0.84

  Alignments for each domain:
  == domain 1  score: 159.8 bits;  conditional E-value: 1.6e-50
                 SS--EEEECCTCCCCCCE.EEEEEGGGSTTSBTTHHHHHHHHHHHHTTTTTSEEEEEBSSHHHHHHHHHHHHHT-EEEEEEETTS-...HHHHHHHHHT CS
        PALP   6 gpTPlvrlprlskelgvp.lflKlEslnptgSfKdRgaeyllarlkegtgaktvveassGNhgralAaaaallGlkvtivvpadas...pekvallrll 100
                 +p+ l+ +++l++  g++ ++lK+E+ln+tgS+K++ a   ++ +++  +++ ++e+++G+hg+a+A ++a++G+k+ti++ a +    + +v +++ll
  KHJ31301.1 360 RPSQLHMAENLTRYAGGAnIWLKREDLNHTGSHKINNALGQILLARRLGKTEIIAETGAGQHGVATATVCAKFGMKCTIYMGAEDVrrqALNVFRIKLL 458
                 7899999*****9999999********************99999888879999999999**************************97767********* PP

                 T-EEEEECCHHHHHHHHHHHHHHH...........STTCEE--TTTSHHHHHH.HHTHHHHHH....HHTTTTEEEEEEE-SSSHHHHHHHHHHHHHST CS
        PALP 101 Gaevvevggdydeavaaaaelaae...........gegaylvsqfdnptvieg.ygtiglEil....eqlggkpdavvvpvGgGgliaGiaaglkerrp 183
                 Ga+vv v+++  + ++a++e+ ++           +++a+  ++f  pt++   ++ ig E      +  g+ pd+vv++vGgG++++G+ +++ e+  
  KHJ31301.1 459 GAKVVAVESGSRTLRDAVNEAMRSwvvnlqnthyiIGSAIGPHPF--PTIVRTfQAVIGKETRdkffKLRGKLPDVVVACVGGGSNASGMFHPFSED-L 554
                 **********99999999999999999987555555555555555..8899999********855545555************************95.5 PP

                 T-EEEEEEEC..TTCGGTTCC...S..S.SS..B........................SSS.CCSTCSCGTTCCHHHHSEEEEEEEEEEHHHHHHHHHH CS
        PALP 184 dvrvigvepe..gsdalarsl...ragrrvtvpvs.......................dtiadglavgspselafelldrlvdeivtvsdeealeamrl 254
                 dv+++gve+   g ++  +s+             +                       ++   gl+ + ++++   + d +  e+++ +d+ea+ ++r+
  KHJ31301.1 555 DVKLLGVEAGgdGLNTTKHSAtltS---------GtkgvlhgvrtyilqdehgqisdtHSVSAGLDYPGVGPELAFWKDTCRAEFIAATDAEAFIGLRT 644
                 69*****987555555555552220.........2334566667777888887777668888888888555555557799999**************** PP

                 HHHHHSB-B-H.HHHHHHHHHHHHHHHCCTTCEEEEEEE-B CS
        PALP 255 larregivvep.ssaaalaalklreagelkegdrvvviltg 294
                 l + egi++   +s+a + a+  + a+++++g+++v+ l+g
  KHJ31301.1 645 LSELEGIIPALeTSHAIYSAI--ELAKKMEKGKDIVICLSG 683
                 ***********6777777777..9999999999****9998 PP

>> BtpA  BtpA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.19   1.1e+03      33      60 ..      35      62 ..      30      76 .. 0.77
   2 !   13.6   0.0   5.8e-06     0.034     178     230 ..     186     241 ..     162     250 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.19
        BtpA 33 keakaleegGvDavilenygdaPflkev 60
                + + ale+gG+D + l   +  P+   +
  KHJ31301.1 35 DILLALEAGGADIIELGLVFTDPYADGP 62
                556799********99999999998653 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 5.8e-06
        BtpA 178 lsGkatGgevdlee.lklaketvk.vkvlvgsGvseenlekll.siadGvivgtsi 230
                 ++G +   +++l + l+++k++   v+++vg G+s+    +l+ siadGv++g++i
  KHJ31301.1 186 VTGATGSLNPQLPKfLNRVKNASGgVPTVVGFGISTREHYQLIsSIADGVVIGSQI 241
                 6777777778876637888888889*********998877766379********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (712 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       352  (0.019633); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 5048.47
//
Query:       KHJ31302.1  [L=420]
Description: putative dihydrofolate synthetase fol3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-07   32.1   0.3    4.4e-07   30.1   0.3    1.9  1  Mur_ligase_M  Mur ligase middle domain


Domain annotation for each model (and alignments):
>> Mur_ligase_M  Mur ligase middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.3   2.4e-11   4.4e-07       1     149 [.      25     213 ..      25     238 .. 0.80

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 2.4e-11
                   EESSS-HHHHHHHHHHHHHCT...EEEEETTC.....................................SS-THHHHHHHHHHHHHTT-SEEEEE-- CS
  Mur_ligase_M   1 vTGtnGKTTtteliaaileka...gkvigtvg.....................................ttnneiglpktlaemekkeaeyavlEvs 57 
                   v+GtnGK ++  ++ a+l+++    + +++                                        t+ ei +  +++ ++++++++ v+Ev+
    KHJ31302.1  25 VAGTNGKGSVCAYLSAMLNASgvrSGRFTSPFlidridaitinekvvnnqtfedaeakileinrthkiqATEFEIITAIAFEVFAREKIDIGVIEVG 121
                   89*******************66544444444899999*******************************99999999******************** PP

                   HCHHHC.TTTCCHCBESEEEE---TSTTHHHH.SSHHHHHHHHHHHHHTSETTCEEEEETTSC...CHHHHHCTCCTCEEEEESSSTS.ECEEEE CS
  Mur_ligase_M  58 shglge.krlegllkpdvavitnispdHldfh.gtlenyaeaKaelferlkeegiavinaddpyakelikklkkakvkvvtfglekea.edlrak 149
                     g  +   + +  k +v vit i+ dH   +  ++e++a +Ka +++   +  i  +n++    + ++++++k + ++v  ++++   edl+++
    KHJ31302.1 122 LGGRLDsTNIME--KKAVTVITKIGLDHQSWLgNSVEEIALEKAGIMRTGVPCVIDRTNNESV-RNVIKEHAQKIGTDIVLSSIDSPFfEDLKHD 213
                   *96555455555..899*************88689************7666543444443333.5566667777777788888888766555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3044.37
//
Query:       KHJ31303.1  [L=136]
Description: putative 60s ribosomal protein l26 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.3e-37  127.3   4.1      3e-37  126.9   4.1    1.1  1  Ribosomal_L26  Ribosomal proteins L26 eukaryotic, L24P archae
    1.5e-08   34.2   1.1    3.5e-08   33.1   1.1    1.6  1  KOW            KOW motif
  ------ inclusion threshold ------
       0.14   12.2   0.1       0.15   12.0   0.1    1.2  1  DUF1223        Protein of unknown function (DUF1223)


Domain annotation for each model (and alignments):
>> Ribosomal_L26  Ribosomal proteins L26 eukaryotic, L24P archaeal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.9   4.1     5e-41     3e-37       2      82 .]      10     122 ..       9     122 .. 0.99

  Alignments for each domain:
  == domain 1  score: 126.9 bits;  conditional E-value: 5e-41
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................xxxxxxxxxxxxxxxxxxxxxx RF
  Ribosomal_L26   2 ssrrkqrKahfnapshirrklmsapLskeLrekygvrslpir................................gvtrekangttvpvgihpSkvv 65 
                    ssrrk+rKahfnaps++rr +msapLskeLr ky+v+++pir                                +v +ek+ g++vp+gih S+vv
     KHJ31303.1  10 SSRRKSRKAHFNAPSSVRRTIMSAPLSKELRDKYNVKTIPIRkddevlvvrgsnkgregkitsvyrlkyvvhieRVVKEKSSGQSVPLGIHSSNVV 105
                    89********************************************************************************************** PP

                    xxxxxxxxxxxxxxxxx RF
  Ribosomal_L26  66 ItklklDkdrkkiLerk 82 
                    ItklklDkdr++iLerk
     KHJ31303.1 106 ITKLKLDKDRERILERK 122
                    ****************9 PP

>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   1.1   5.8e-12   3.5e-08       1      32 []      52      83 ..      52      83 .. 0.97

  Alignments for each domain:
  == domain 1  score: 33.1 bits;  conditional E-value: 5.8e-12
                TTSEEEESSSTTTTCEEEEEEEETTTTEEEEE CS
         KOW  1 pGdhVkVvsGphkGktGkVvkvdqhkvrVfvd 32
                ++d+V Vv+G +kG++Gk+++v++ k+ V+++
  KHJ31303.1 52 KDDEVLVVRGSNKGREGKITSVYRLKYVVHIE 83
                69****************************97 PP

>> DUF1223  Protein of unknown function (DUF1223)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   2.6e-05      0.15      91     173 ..       4      81 ..       1     107 [. 0.66

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.6e-05
                 HHHHHHHHHHTT-S--S-EEEEE-SS.SEEEEE---S....S-EEEEEEEEEEEEEEE---------EEEEEEEEEEEEEEEE CS
     DUF1223  91 leaaisaaaaaaaaakvkvklsregdetlevsveaaaaseekeadvllvlvekeeevkvkrGeNagrtlthdnvvrelekvge 173
                 +++ ++++++++++a++++ +s +++  +++ ++++    +++++v  + ++k++ev v rG N+gr+ + + v r  + v +
  KHJ31303.1   4 INSSLHSSRRKSRKAHFNAPSSVRRT-IMSAPLSKEL---RDKYNVKTIPIRKDDEVLVVRGSNKGREGKITSVYRL-KYVVH 81 
                 55666666666555555555442222.3344444444...59*************************9887777653.44444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       459  (0.025601); expected 358.6 (0.02)
Passed bias filter:                      251  (0.0139997); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1042.59
//
Query:       KHJ31304.1  [L=373]
Description: putative nucleoporin nup44 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.8e-41  139.9   0.4    1.1e-40  139.0   0.0    1.6  2  Nup54           Nucleoporin complex subunit 54
    6.1e-11   41.7   0.4    1.1e-10   40.9   0.4    1.4  1  Nup54_57_C      NUP57/Nup54 C-terminal domain
  ------ inclusion threshold ------
      0.043   13.8   3.9       0.91    9.5   1.0    2.3  2  Laminin_II      Laminin Domain II
       0.19   12.5   2.1         12    6.7   0.4    2.7  2  Occludin_ELL    Occludin homology domain
        2.9    8.8  23.4        6.6    7.7  23.4    1.6  1  Nucleoporin_FG  Nucleoporin FG repeat region


Domain annotation for each model (and alignments):
>> Nup54  Nucleoporin complex subunit 54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.0   0.0     3e-44   1.1e-40       2     140 .]     149     285 ..     148     285 .. 0.98
   2 ?   -2.9   0.1       1.9   6.7e+03     118     122 ..     331     335 ..     304     348 .. 0.51

  Alignments for each domain:
  == domain 1  score: 139.0 bits;  conditional E-value: 3e-44
                 -TT--HHHHHHHHHT-SST.TEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT CS
       Nup54   2 pagvdeekWeeAleenPdpeklvPvpvkGFedLakRvkaQqkevaqhrerlkeisdrleeleqkhqletsvrlekakkrhvelshRllrllrkleilrs 100
                  +++d++ W+eAl+++Pd+ +++Pv+++GF ++ +R k+Qq+++a+++ rl+ei+++l+ ++q h+++ s ++ +a+++h+ l++R++ l++k+++lr+
  KHJ31304.1 149 GPNEDPKAWDEALSNKPDK-GYIPVLCVGFAQIGERIKLQQRNLANFNARLHEINNSLSRMMQDHETKFSIKVMDARRKHTVLKQRCIALATKVQVLRN 246
                 5899***************.9****************************************************************************** PP

                 -SS---SSHHHHHHHHHHHHHHHS-HHH.HHHHHHHHHHH CS
       Nup54 101 rgyaldaeEeelrarletleaqlndpaqlkgrvnelwarl 140
                 rgyal  +Eeel+ +l +le+q+ndpa   +r +e+war+
  KHJ31304.1 247 RGYALGGDEEELKIKLLSLERQVNDPAL-GARGEEIWARM 285
                 *************************999.9********97 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.9
                 HHHHH CS
       Nup54 118 tleaq 122
                 +l+a+
  KHJ31304.1 331 HLSAE 335
                 22222 PP

>> Nup54_57_C  NUP57/Nup54 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   0.4     3e-14   1.1e-10       3      29 .]     317     343 ..     315     343 .. 0.96

  Alignments for each domain:
  == domain 1  score: 40.9 bits;  conditional E-value: 3e-14
  Nup54_57_C   3 KaKKILeDYekQLqHLkKElEsikkDy 29 
                 + KKILeDY +QL HL  ElEsik Dy
  KHJ31304.1 317 RSKKILEDYHTQLLHLSAELESIKRDY 343
                 78************************9 PP

>> Laminin_II  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   1.0   0.00025      0.91      23      84 ..     188     250 ..     178     270 .. 0.86
   2 ?    4.8   0.1    0.0075        27      12      60 ..     315     363 ..     307     368 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00025
                 XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH CS
  Laminin_II  23 sqnlentkeklseinrsveetnekvk.dankairdArrsvkkLeklapqLldklkelkqleea 84 
                 + nl n ++ l+ein+s+ ++ ++ + +++  + dArr+   L++    L  k++ l+++  a
  KHJ31304.1 188 QRNLANFNARLHEINNSLSRMMQDHEtKFSIKVMDARRKHTVLKQRCIALATKVQVLRNRGYA 250
                 6899**************9999988879999********************999999988766 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0075
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Laminin_II  12 akevleqlaplsqnlentkeklseinrsveetnekvkdankairdArrs 60 
                 +   +++l++ +++l +++++l++i+r+ ee +++ ++ +  ++d +++
  KHJ31304.1 315 TRRSKKILEDYHTQLLHLSAELESIKRDYEEWQNDPSNPSPKTDDSSKN 363
                 5566788999999999999999999999999999888888888887766 PP

>> Occludin_ELL  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.4    0.0033        12      30      94 ..     183     246 ..     175     247 .. 0.66
   2 ?    4.4   0.1     0.017        62      59     100 ..     307     347 ..     273     365 .. 0.58

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0033
  Occludin_ELL  30 eleevskkfseLerelkelkegsk.eykkieeeilqeykklkkdpeyqekkkrceyLkekLshiKk 94 
                   +++  ++++++++++l+e +++ +  +++ e +   + k +   +++   k+rc  L  k +++++
    KHJ31304.1 183 RIKLQQRNLANFNARLHEINNSLSrMMQDHETK--FSIKVMDARRKHTVLKQRCIALATKVQVLRN 246
                   455556666777777777766666344444444..5666677788888999999999999999886 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.017
  Occludin_ELL  59 eeeilqeykklkkdpeyqekkkrceyLkekLshiKklikeyd 100
                   ++ + +e+ +  +++   +  +++ +L+++L+ iK+  +e++
    KHJ31304.1 307 TNTMDEEFTRR-SKKILEDYHTQLLHLSAELESIKRDYEEWQ 347
                   44444455444.233334445566666666666666666554 PP

>> Nucleoporin_FG  Nucleoporin FG repeat region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7  23.4    0.0018       6.6      14      76 ..       9      80 ..       1      95 [. 0.47

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0018
  Nucleoporin_FG 14 lFGststt..atstgglFGasstatatasggglfgat......sqtaasgglFGstnattqtta.tgglFGs 76
                     FG+++++  ++ t++lFG+ s++t+++++gg+fg+       ++++ + + F s  +++q ++ +++  G+
      KHJ31304.1  9 GFGQSQQSkgPQLTSSLFGTPSQPTQNQQQGGIFGGLssdqnnQSSQIGLNNFPSLGQSNQFQQaSNSTLGQ 80
                    455555555555555555555555555555555555544322111111222332222222222224555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       856  (0.0477439); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 2799.06
//
Query:       KHJ31305.1  [L=1098]
Description: putative nad-specific glutamate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.9e-65  219.2   0.0    1.3e-64  218.3   0.0    1.4  1  ELFV_dehydrog  Glutamate/Leucine/Phenylalanine/Valine dehydro
    4.8e-22   77.4   0.0    2.7e-16   58.4   0.0    2.1  2  Bac_GDH        Bacterial NAD-glutamate dehydrogenase


Domain annotation for each model (and alignments):
>> ELFV_dehydrog  Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.3   0.0   1.4e-68   1.3e-64       1     240 [.     733     995 ..     733     997 .. 0.92

  Alignments for each domain:
  == domain 1  score: 218.3 bits;  conditional E-value: 1.4e-68
                    T--.TTTTTHHHHHHHHHHHHHHHHTTTS-STTEEEEEE--.SHHHHHHHHHHHHCT-EEEEEEESSEEEEETTEE-HHHHHHHHHCSSSSTTHSH CS
  ELFV_dehydrog   1 GGs.ldrpeaTglGvvyyveemlkklkldslegkrvaisGs.GnvgsyaallltelgakvvavsDssGviydpeGldieellelkeerksvkeykk 94 
                    GG+ +d +++T+l+v+ yv  +++kl+ld ++ ++++++G+ G++gs+++ll+    + +++++D+sGv++dp+G+d eel++l+++r++++++++
     KHJ31305.1 733 GGIpHDAYGMTTLSVREYVCGIYRKLGLDPTKVRKMQTGGPdGDLGSNEILLS---SEMYTSIVDGSGVLVDPNGIDHEELVNLAKKRQMISHFDM 825
                    9****************************************************...679************************************9 PP

                    H..STSTSEEESHHSHH.....................HHSS-SEEEE-.SSTTSB-HHHHTHTH...HTT-SEEE-SSSS-B-HHHHHHHHHTT- CS
  ELFV_dehydrog  95 s..sekkaeyieneeel.....................lelkvdilvPc.Atqneideenakali...kngvklvvEgANlpttqeAkeileeagv 163
                    s  s+++++++ +e+++                     ++  +d++vPc +++++id +n+++ i   k++++++vEgANl++tq+Ak +le+ag+
     KHJ31305.1 826 SklSKDGYRVLIDENNVvlpsgeivnngttfrntfhlrVDNMTDCFVPCgGRPEAIDLSNLNKIIcngKSTIPYIVEGANLFITQDAKIRLENAGC 921
                    9995666665444456668888888998888877664433489*******************88899999************************** PP

                    EEE-HHHHTTHHHHHHHHHHHHHHCT----HHHHHHHHHHHHHHHHHHHHHHHHHCT-THHHHHHHHHHHHHHHHHH CS
  ELFV_dehydrog 164 lvvpdkaaNaGGVtvSslEmlqnlarlswteeevdeklkkimkeifkavveeaeeykqelvkganiagfekvaeamk 240
                    ++++d++aN+GGVt+SslE+l++   ls++++e++e+++ +++    ++++++ e+ qe +k++++++fe+++++  
     KHJ31305.1 922 ILFKDASANKGGVTSSSLEVLAS---LSFDDKEFEENMCVDQDGNAPSFYKAYVEEVQEKIKENARLEFEAIWRESI 995
                    **********************9...677********************************************9875 PP

>> Bac_GDH  Bacterial NAD-glutamate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   0.0   3.1e-20   2.7e-16     604     786 ..     462     656 ..     438     674 .. 0.76
   2 !   16.9   0.0   9.9e-08   0.00089    1059    1140 ..     900     984 ..     887    1017 .. 0.77

  Alignments for each domain:
  == domain 1  score: 58.4 bits;  conditional E-value: 3.1e-20
     Bac_GDH 604 gltfsqeyieetllkhpeiarllvelFea....rf.dpaleeeeeeeee......ekleeeieeaL.devasldedrilrrllelieatlRtnfyqkde 690
                 + tf+ +yi+e + +++++ r l++ F      rf dp++e++              +e++++e + ++ ++ +e+ ++ ++l++ +++l+tnfy++  
  KHJ31305.1 462 TETFTADYITEIIKAQTDLIRPLYSSFASihltRFrDPQEESS-----PhspmpePYTEKQLRELIaKSCQNEHEELVMNSFLTFNNSVLKTNFYTT-- 553
                 347899*****************99997511114423444333.....2345565445555666553457899999*******************99.. PP

     Bac_GDH 691 dgeakeyislKldpskipelPePrPlfEif.VysprvegvHLRggkvARGGlRW..SDRreDf....R...tEvLGLvKaQqvKNavIVPvGaKGGFvv 779
                    +k  +s++l+ps +pe+  P+Pl+ +f V  +++ g HLR+ ++ARGG+R   S  re +    R    E  GL  +Qq KN  I   G+KG  ++
  KHJ31305.1 554 ---TKVALSFRLNPSFLPEIEYPQPLYGMFlVIGSEFRGFHLRFRDIARGGIRIvkSRNREAYsinaRrlfDENYGLANTQQRKNKDIPESGSKGVILL 649
                 ...6889**********************97789*******************7546667877444422334999*******************98777 PP

     Bac_GDH 780 krlpkaa 786
                  ++++++
  KHJ31305.1 650 DAQHQDK 656
                 7666333 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 9.9e-08
     Bac_GDH 1059 vgEGgNLGltQlgRiEyalkggrintDaiDNsaGVdcSDhEVNiKilLnklvaegeltlkqR.n..klLaemtdeVaelVLrdny 1140
                  + EG+NL +tQ ++i   ++g  +  Da  N +GV +S  EV   + +++   e ++ ++q  n  ++ ++  +eV e + ++++
  KHJ31305.1  900 IVEGANLFITQDAKIRLENAGCILFKDASANKGGVTSSSLEVLASLSFDDKEFEENMCVDQDgNapSFYKAYVEEVQEKIKENAR 984 
                  89****************************************8777777766666665444312113555666666666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1098 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.31s 00:00:01.04 Elapsed: 00:00:00.46
# Mc/sec: 7200.69
//
Query:       KHJ31306.1  [L=823]
Description: putative tbc domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-34  119.8   0.1    4.3e-34  118.0   0.1    1.9  1  RabGAP-TBC  Rab-GTPase-TBC domain


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.0   0.1   2.4e-38   4.3e-34      45     214 ..     523     721 ..     487     722 .. 0.88

  Alignments for each domain:
  == domain 1  score: 118.0 bits;  conditional E-value: 2.4e-38
  RabGAP-TBC  45 ke.lsqIkkDvprtfp...........es....esfknkqgqnqLeriLkaysiynpevgYcqGmndivaplllvsldeeeaFwcfvsLlekyklrdly 127
                 ++  + I++D++rtfp           +     e+  + ++ ++L+ +L+a+siy+p +gYcq +n+++++ll ++++ee+aFw++  +  +  l+  +
  KHJ31306.1 523 QIdDEIIERDLNRTFPdnikfkpdrdpNAtspeEENFETPILQSLRYVLRAFSIYHPRIGYCQSLNFLAGLLL-LFMNEEKAFWMLNIIT-RIFLPGTH 619
                 444799**********999888776651156744445559*********************************.8889999*****9999.9******* PP

  RabGAP-TBC 128 tsslpglkrklkvleellkkkdpklykhl.ke.............egldl.elfaikwfltlflrefpletvlrlwD.lllegekfvllrvalailkll 210
                 + +l+g + +l vl   +k+ +p+++ ++ +e              +l + +l ++ wf+ +f+ ++p+et+lr+wD +++eg+k+ l+r+al i+kl 
  KHJ31306.1 620 SLTLEGANIDLGVLMSSVKDMMPSIWAKIgNEldgqpsittvsapMRLPPvTLCTTAWFMSCFIGTLPIETTLRVWDsFFYEGSKT-LFRIALTIFKLG 717
                 *****************************5559999999999999555441568999********************9999***99.**********99 PP

  RabGAP-TBC 211 eeel 214
                 e+++
  KHJ31306.1 718 EPQI 721
                 9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (823 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.24s 00:00:00.90 Elapsed: 00:00:00.40
# Mc/sec: 6140.22
//
Query:       KHJ31307.1  [L=130]
Description: putative ubiquitin conjugating enzyme [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-27   96.5   0.0    1.5e-27   96.0   0.0    1.2  1  UQ_con     Ubiquitin-conjugating enzyme
    0.00025   20.8   0.0    0.00032   20.4   0.0    1.1  1  Prok-E2_B  Prokaryotic E2 family B
  ------ inclusion threshold ------
      0.015   15.6   0.1      0.018   15.3   0.1    1.4  1  RWD        RWD domain
      0.076   12.9   0.0      0.098   12.5   0.0    1.2  1  UEV        UEV domain


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.0   0.0   3.3e-31   1.5e-27      43     137 ..      25     121 ..       7     124 .. 0.95

  Alignments for each domain:
  == domain 1  score: 96.0 bits;  conditional E-value: 3.3e-31
                 TTEEEEEEEE--TTTTTS--EEEESST-SCTTBE..TTSBB-CGGGSTTT--TTSHHHHHHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHH CS
      UQ_con  43 eggvFklelefpedYPlkpPkvkfvtkifHPnvd..ksGevcldiLkeekWspaltlesvllsiqsLlaepnpesplnkeaakllkkdreeykkkvk 137
                 +gg F+l l++p+dYP+kpPk++f+t+i+HPnv   ++G+ c+  Lk + W+p++++ ++l++ q++l+ep  ++++++  a+ ++++r+e+++++ 
  KHJ31307.1  25 QGGNFELLLTLPSDYPFKPPKLSFKTRIYHPNVTfdEQGSMCIGALKPDAWKPSSRIINILMATQQMLTEPVLDDAVETALADRYRNNRNEFNEEAA 121
                 799******************************888*********************************************************9986 PP

>> Prok-E2_B  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   7.1e-08   0.00032      25     120 ..      10     119 ..       2     128 .. 0.76

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 7.1e-08
   Prok-E2_B  25 aierssvkt......sggtvdlrlvypdsfpllppavflqdpeqlkllpHintfg.gaLClleeeldldewdpngsvadvleqlqqvLnegisgde... 113
                 a+e  ++++      +gg ++l l +p ++p+ pp+ + + +      p + +++ g +C     l++d+w+p + + ++l  +qq+L+e + +d    
  KHJ31307.1  10 AKELAEISQnspagmQGGNFELLLTLPSDYPFKPPKLSFKTRI---YHPNVTFDEqGSMCIG--ALKPDAWKPSSRIINILMATQQMLTEPVLDDAvet 103
                 3344444445556669********************9999888...3444544437*****8..9*************************999998777 PP

   Prok-E2_B 114 .........daefagE 120
                           +ef +E
  KHJ31307.1 104 aladryrnnRNEFNEE 119
                 7777755555555555 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   0.1   4.1e-06     0.018      53      78 ..      27      52 ..       6     112 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 4.1e-06
                EEEEEEEEE-SSTTSS--EEEEEECC CS
                xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD 53 pslkleiklpeeYPeeaPiislsste 78
                 +++l  +lp++YP ++P++s+++  
  KHJ31307.1 27 GNFELLLTLPSDYPFKPPKLSFKTRI 52
                589999****************9876 PP

>> UEV  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.2e-05     0.098      48     113 ..      27      90 ..       7      99 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.2e-05
                 -EEEEEEE--TTTTTS--EEEE-GCC--TSGGGGGB-TTSBB--HHHH..S--TTT--HHHHHHHHHH CS
         UEV  48 yniPiliwvlesyPveaPivyvkptksmvikknenvdaqGlvylpyLe..eWkreksnlvslvqelaq 113
                  n+ +l+ ++++yP+++P +  k +     ++n   d+qG +    L+   Wk+ +s +++++   +q
  KHJ31307.1  27 GNFELLLTLPSDYPFKPPKLSFKTRIY---HPNVTFDEQGSMCIGALKpdAWKP-SSRIINILMATQQ 90 
                 5788999***********998876654...777799*****9999996447998.5555555544333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 959.96
//
Query:       KHJ31308.1  [L=247]
Description: putative horma domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-11   42.9   0.0    5.3e-11   42.5   0.0    1.2  1  HORMA     HORMA domain


Domain annotation for each model (and alignments):
>> HORMA  HORMA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   2.9e-15   5.3e-11       6     173 ..      20     179 ..      12     209 .. 0.75

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 2.9e-15
       HORMA   6 kellaasissilylRglfpedaFedrklsglklkiLlrgsseeadr.lldwLekGvfdaLekkyLealiltIykdkdepenvlEsYtFsfkytksggke 103
                 + +l+++++sil+ R+++p++ F  ++   +++ +  +++++ ++r + d + +     L  + + +++++I++d+ +   v+E+Y F+++ + +  ++
  KHJ31308.1  20 TSFLTVAFHSILFNRDIYPSSTFILTRA--YNFPVR-QSRHPLVCRwINDTISH-LTPLLLAGSVARVVFAIFNDQAK---VMERYMFNIDRFPEVASN 111
                 4589********************9998..566655.33557788878888888.888899**************999...***********9855542 PP

       HORMA 104 dvssskletkkknleslsldekeeekkktekevkkelealirrlitltqsLpplpekryltmkLlytdd.t 173
                      +  + ++ +e  + +e    k +   e+ ++l+a ir+l + +++L+plp +++ t+ +   d+  
  KHJ31308.1 112 -YALVDF-AVREGQEGREGKE-YLMKGVPRIEIDEQLRATIRTLDYACSQLSPLPGNCTYTVAVELKDTaE 179
                 .222222.2233333222222.44455578889**********************9999999988888752 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1893.10
//
Query:       KHJ31309.1  [L=463]
Description: putative uridine kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.5e-58  196.0   0.0    7.6e-58  195.5   0.0    1.2  1  PRK             Phosphoribulokinase / Uridine kinase family
    2.2e-40  138.4   0.0    3.6e-40  137.6   0.0    1.3  1  UPRTase         Uracil phosphoribosyltransferase
    3.9e-05   24.2   0.0    9.5e-05   22.9   0.0    1.7  1  AAA_18          AAA domain
    0.00031   20.6   0.0    0.00082   19.3   0.0    1.7  1  CPT             Chloramphenicol phosphotransferase-like prote
    0.00081   19.8   0.2       0.02   15.3   0.2    2.5  1  AAA_17          AAA domain
     0.0053   16.7   0.0       0.01   15.8   0.0    1.4  1  RsgA_GTPase     RsgA GTPase
     0.0053   17.3   0.4      0.015   15.8   0.4    1.7  1  ABC_tran        ABC transporter
      0.006   15.9   0.0      0.014   14.7   0.0    1.5  1  Zeta_toxin      Zeta toxin
     0.0086   16.5   0.4        0.7   10.3   0.0    2.5  2  RNA_helicase    RNA helicase
  ------ inclusion threshold ------
      0.014   14.6   0.0      0.034   13.4   0.0    1.6  1  NB-ARC          NB-ARC domain
      0.016   14.9   0.0      0.042   13.6   0.0    1.6  1  AAA_29          P-loop containing region of AAA domain
      0.021   14.9   0.6      0.047   13.8   0.6    1.6  1  MMR_HSR1        50S ribosome-binding GTPase
      0.032   13.8   0.2      0.074   12.6   0.0    1.6  2  Pribosyltran    Phosphoribosyl transferase domain
      0.034   14.3   0.0       0.16   12.1   0.0    2.0  2  AAA_33          AAA domain
      0.048   13.5   0.1       0.46   10.3   0.1    2.3  1  dNK             Deoxynucleoside kinase
      0.078   12.3   0.1       0.86    8.9   0.0    2.1  2  DnaB_C          DnaB-like helicase C terminal domain
      0.096   11.7   0.0       0.21   10.6   0.0    1.4  1  T2SSE           Type II/IV secretion system protein
       0.11   12.4   0.0       0.58   10.0   0.0    2.1  2  APS_kinase      Adenylylsulphate kinase
       0.11   12.5   0.0       0.24   11.4   0.0    1.5  1  DUF87           Helicase HerA, central domain
       0.14   11.8   0.1        1.2    8.8   0.0    2.1  2  Cytidylate_kin  Cytidylate kinase
       0.18   11.5   0.4       0.71    9.5   0.1    2.2  2  CoaE            Dephospho-CoA kinase


Domain annotation for each model (and alignments):
>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.5   0.0     9e-61   7.6e-58       1     196 [.      36     223 ..      36     224 .. 0.98

  Alignments for each domain:
  == domain 1  score: 195.5 bits;  conditional E-value: 9e-61
         PRK   1 vIgvagsSGaGkttvarklekifgrekvkaaeiegdsflrldraekdleleerkrakekevsflspeandfdllyevlkelkegkkvdkpiYsheteea 99 
                 +Ig+agsSG+Gk+t+++++++ ++   ++     ++++l +d+++k l++e  ++a+ +e++f+sp+a+dfd l   l++lk gk+ ++p+Ys++++ +
  KHJ31309.1  36 IIGIAGSSGSGKSTLSNAIVNKMN---LP-----WVVILPMDSFYKPLSSESSEKAFRNEYDFDSPNAIDFDILIDRLRNLKAGKTAEIPRYSFSKHAR 126
                 8*********************99...77.....888************************************************************** PP

         PRK 100 apdkeeliegadvlviEGlhalydervaelldlkiyvdisidlelarklqRDiaeRGrsleavldsil.rrkpdyvnyikpqfseadliiqrvptvdv 196
                  + ++  i++++vl++EG++alyd rv elld+ki+  +++d +l+r++ RD +eRGr++e+++++++ ++kp+y+++++pq + ad+i++r+ +++v
  KHJ31309.1 127 EK-ETTSIYSPHVLILEGIFALYDPRVLELLDMKIFCEADTDTCLSRRILRDLKERGRDVEGCIKQWFsFVKPNYERFVEPQRKVADIIVPRGVENQV 223
                 **.99****************************************************************************************99987 PP

>> UPRTase  Uracil phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.6   0.0   4.2e-43   3.6e-40       3     183 ..     268     447 ..     265     454 .. 0.97

  Alignments for each domain:
  == domain 1  score: 137.6 bits;  conditional E-value: 4.2e-43
     UPRTase   3 shpllkakltilRdastsrkdfrelvdriarllaeealsallpveevtvttplgkeysgelldeekialVpilRaGegmeealrellpearvghlglqr 101
                 ++p+l+ + ti+ d+ t  ++f+++ dri++ll+e al++  p+ e+ v tp+g   +g+ ++  +i ++ ilR+G ++e +l+++lp++r+g +++q 
  KHJ31309.1 268 DTPQLQVMNTIIQDRMTCAEEFVFYFDRISTLLIECALNK-APFVEKSVSTPTGCAFTGVETSG-EISAIVILRGGSAFETGLKRVLPDCRTGRILIQS 364
                 79*************************************9.******************99887.9********************************* PP

     UPRTase 102 eeetlepveyynkLPkki.aertvlllDpviaTGgsaaaaiqlLkergvgeekIlvlsvlaseegvkrlaeefpkvkvvtaav 183
                 +  + ep+++y kLP++i +++ vl+lDp +++Gg+a +a+q+L+++gv e++I++++  a + g++rl++ f kv vv+ ++
  KHJ31309.1 365 NVGNGEPELHYLKLPNNIkSHKAVLILDPQMSSGGAALMAVQVLIDHGVAEDRIIFVTYFAGKMGLNRLTHVFSKVGVVVCKI 447
                 ******************88899********************************************************9987 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   1.1e-07   9.5e-05       1     117 [.      37     180 ..      37     190 .. 0.78

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 1.1e-07
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf...gvnlrdvakenglllevdpe.....aldeskrldedkldklldaleenss..................alee 73 
                 I+++G +G+GK+tl++++ +++++   ++  +d +++  ++++ +++     ++d+ + +d d l   l++l++                     +  +
  KHJ31309.1  37 IGIAGSSGSGKSTLSNAIVNKMNLpwvVILPMDSFYKPLSSESSEKAfrneyDFDSPNAIDFDILIDRLRNLKAGKTaeiprysfskharekettSIYS 135
                 89*******************999*99777777777777777777777766777777777777766666666665449999999999999999887777 PP

      AAA_18  74 gknlvidghla..eleseaakdikkvvLtaspeelleRlekRgyee 117
                 +++l+++g+ a  +++  ++ d+k ++ +a+++++l R   R+ +e
  KHJ31309.1 136 PHVLILEGIFAlyDPRVLELLDMK-IFCEADTDTCLSRRILRDLKE 180
                 889999999772244556666777.999999999999988888665 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   9.6e-07   0.00082       3      57 ..      36      91 ..      34     110 .. 0.80

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 9.6e-07
                EEEEEE-TTSSHHHHHHHHHHHSSS-EEE.EEHHHHHHHS-GGGGTSTTSEEEETT CS
         CPT  3 iilLnGgsssGKsslaralqevldepwlh.lgvDafvealppkrqdeadglefete 57
                ii + G+s sGKs+l++a+ + ++ pw+  l++D+f + l  +  ++a   e++ +
  KHJ31309.1 36 IIGIAGSSGSGKSTLSNAIVNKMNLPWVViLPMDSFYKPLSSESSEKAFRNEYDFD 91
                66688**********************86379******888887776655555544 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.2   2.3e-05      0.02       2     129 ..      41     185 ..      40     188 .. 0.63

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.3e-05
                 E-TTSSHHHHHHHHHHHHTEEEEEH..HHHHHHHHHTTTSHSS.HHHHC.TSHHHHHHHHHHHHHHHHHHHH..HSSEEEEEE-SEEEETTEEEESSHH CS
      AAA_17   2 GgPGsGKgtqceklvekygfthlsa..Gdllreeakrgglaka.rdemr.klpleekkelqkeaaekiaeea..kkkgvlvdghprikeqagfldglpk 94 
                 G  GsGK+t+++ +v k++++ +     d +++  ++++++ka r+e++ + p+ ++ +++    ++++  +  +   + + +h+r ke+  +++    
  KHJ31309.1  41 GSSGSGKSTLSNAIVNKMNLPWVVIlpMDSFYKPLSSESSEKAfRNEYDfDSPNAIDFDILIDRLRNLKAGKtaEIPRYSFSKHAREKETTSIYSPHVL 139
                 889***************999776545788888888887744314444455566665555444444443333114455899999998887666543222 PP

                 HHHHHH............SEEEEEE--HHHHHHHHHHH..TTST-TS CS
      AAA_17  95 evleelk..........pdaiilleadpeeilerrlkd..rtrgrdd 129
                  +le ++           d+ i+ ead +++l+rr+ +  ++rgrd 
  KHJ31309.1 140 -ILEGIFalydprvlelLDMKIFCEADTDTCLSRRILRdlKERGRDV 185
                 .2322222222333333488999999999999999888688999986 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.2e-05      0.01      83     124 ..      18      59 ..       3      65 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.2e-05
                  -TTTHTTHHHHHHHCTTSEEEEECSTTSSHHHHHHHHCTT-- CS
  RsgA_GTPase  83 saktkegleelkellkdktsvlvGqSGvGKStLinallpele 124
                  s+ ++e ++   ++ +  ++ ++G+SG GKStL na++++++
   KHJ31309.1  18 SNGKNERAHYCPPWANVCIIGIAGSSGSGKSTLSNAIVNKMN 59 
                  5555555555556666678889***************99876 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.4   1.7e-05     0.015      13      34 ..      36      57 ..      33      61 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.7e-05
                EEEEEESTTSSHHHHHHHHTTS CS
                xxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkllagl 34
                +++i G++G+GKStL +++ ++
  KHJ31309.1 36 IIGIAGSSGSGKSTLSNAIVNK 57
                689***************9876 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.6e-05     0.014      18      49 ..      36      65 ..      21      75 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.6e-05
  Zeta_toxin 18 lillgGqpGAGKselaellkdelerqgnvvrl 49
                +i ++G++G+GKs+l++++ +++  +   v++
  KHJ31309.1 36 IIGIAGSSGSGKSTLSNAIVNKM--NLPWVVI 65
                6779******************9..5555544 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00082       0.7       3      23 ..      39      59 ..      37     116 .. 0.75
   2 ?    3.8   0.0     0.085        73      37      62 ..     248     273 ..     227     291 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00082
  RNA_helicase  3 lyGpsgeGKStlakeLakall 23
                  + G+sg GKStl++ +++++ 
    KHJ31309.1 39 IAGSSGSGKSTLSNAIVNKMN 59
                  78*************998887 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.085
  RNA_helicase  37 rnpeddfwdgYtgqevvvidDfgqvk 62 
                   ++  ++f d   +q+vv+idD +q +
    KHJ31309.1 248 KKLGQSFGDHPLSQNVVIIDDTPQLQ 273
                   6667778888889*********9976 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   3.9e-05     0.034      21      44 ..      35      58 ..      31      61 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.9e-05
                EEEEEEESTTSSHHHHHHHHCCSH CS
      NB-ARC 21 lvvalvGmgGvGKttlakqilnks 44
                 ++++ G  G+GK+tl++ i+nk+
  KHJ31309.1 35 CIIGIAGSSGSGKSTLSNAIVNKM 58
                599*******************95 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   4.9e-05     0.042      27      43 ..      39      55 ..      29      59 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.9e-05
      AAA_29 27 ltGpsGsGKSTllDAiq 43
                ++G sGsGKSTl  Ai 
  KHJ31309.1 39 IAGSSGSGKSTLSNAIV 55
                89**********98875 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.6   5.5e-05     0.047       2      22 ..      37      57 ..      36      65 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 5.5e-05
                EEEEESTTSSHHHHHHHHHTS CS
    MMR_HSR1  2 vaivGrpNvGKStLinaltge 22
                ++i+G + +GKStL na++++
  KHJ31309.1 37 IGIAGSSGSGKSTLSNAIVNK 57
                89****************997 PP

>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       6.2   5.3e+03      88      95 ..     261     268 ..     253     269 .. 0.86
   2 ?   12.6   0.0   8.7e-05     0.074      36     128 ..     337     428 ..     328     446 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 6.2
                   SEEEEE-S CS
  Pribosyltran  88 kkVliVDD 95 
                   + V+i+DD
    KHJ31309.1 261 QNVVIIDD 268
                   78*****9 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 8.7e-05
                   EETTTHHHHHHHHHHS.TT-EE-EEEEEE-TTT--EE........EE----TTSEEEEE-SEESSSHHHHHHHHHHHCC-BS..EEEEEEEEE-HH CS
  Pribosyltran  36 iargGvpfakiladeL.evplayvrkvkyrpdgseeaargssdesrlledpagkkVliVDDildtGgTllaalelLkekgpe..evriavlvdkpa 128
                   i+rgG  f + l + L +++   +++++  ++g +e +  ++    +  ++ +k Vli D  +++Gg+ l a++ L ++g++  ++++++ ++ + 
    KHJ31309.1 337 ILRGGSAFETGLKRVLpDCRTGRILIQSNVGNGEPELHY-LKL---PNNIKSHKAVLILDPQMSSGGAALMAVQVLIDHGVAedRIIFVTYFAGKM 428
                   788888888888888888998888888888888888863.333...889999*****************************988899888887665 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00019      0.16       4      38 ..      39      76 ..      36     139 .. 0.76
   2 ?   -1.0   0.0         2   1.7e+03     102     121 ..     160     179 ..     149     187 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00019
      AAA_33  4 lvGlpGsGKstlaerllkklg...avllssdtlrrrlf 38
                + G +GsGKstl+  +++k     +v+l  d++++ l 
  KHJ31309.1 39 IAGSSGSGKSTLSNAIVNKMNlpwVVILPMDSFYKPLS 76
                57**************9887788777777777666555 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2
      AAA_33 102 vvvetdeetlkeRlakRaan 121
                 +++e+d +t+ +R   R  +
  KHJ31309.1 160 IFCEADTDTCLSRRILRDLK 179
                 79********9998877665 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   0.00053      0.46       1     151 [.      37     189 ..      37     246 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00053
                 EEEEESTTSSHHHHHHHHHCCST..CEEEE-HHHHCCSSSSHHHHHHHHSHHHHHH..HHHHHHHHHHHHHHHCHHSSS-EEEEES-HHHHHHTHHHHH CS
         dNK   1 ivveGnIgaGKstlvklLskklg..vkvfeEpvdkwtnvqknlLekfYkdpsrwsf..alqtyvllsrlkqqlealatkqvvvleRsiysdryiFakal 95 
                 i + G  g+GKstl + + +k++  ++v+  + + +++  ++  ek +++   +    a+++ +l  rl++ ++    +++  + R  +s +    +  
  KHJ31309.1  37 IGIAGSSGSGKSTLSNAIVNKMNlpWVVILPMDSFYKPLSSESSEKAFRNEYDFDSpnAIDFDILIDRLRNLKA----GKTAEIPRYSFSKH----ARE 127
                 67999***********9998888768888777777777777777888887777643125677778888877733....33333344445555....235 PP

                 HHTTSS-HHHHHHHHHHHHHHHHHCCH.-SEEEEEE--HHHHHHH.....HHHCTTCCCTTS CS
         dNK  96 aekgtlseeelkiykelldnlleelak.pdlliYLkasletcler.....ikkRgreeekki 151
                  e  ++    + i++ ++  +   + + +d+ i+ +a+++tcl r     +k+Rgr  e  i
  KHJ31309.1 128 KETTSIYSPHVLILEGIFALYDPRVLElLDMKIFCEADTDTCLSRrilrdLKERGRDVEGCI 189
                 55666667777777777777774444448888888888888887655555677777776555 PP

>> DnaB_C  DnaB-like helicase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0       0.3   2.6e+02      22      44 ..      37      59 ..      30      75 .. 0.80
   2 ?    8.9   0.0     0.001      0.86      68     121 ..     226     281 ..     220     297 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.3
                EEEEEXTTSSHHHHHHHHHHHHH CS
                xxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C 22 iiiAarpsmGktalalniaenaa 44
                i iA+ ++ Gk++l   i++++ 
  KHJ31309.1 37 IGIAGSSGSGKSTLSNAIVNKMN 59
                569************99998765 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.001
                 HHHHHTXXHHHHHHTTSXHHHHHHHHHHH..HHHHHSEEEEEEXSSXCHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C  68 lsseaeidskklrtgklkeedweklteai..eelseaklfiddtpaltvseirska 121
                 l+ ++ id+k l++++++++d++kl +++  + ls+  ++iddtp+l+v++   + 
  KHJ31309.1 226 LMVTQYIDQKLLEKSTVHRADLKKLGQSFgdHPLSQNVVIIDDTPQLQVMNTIIQD 281
                 66678899*******************863367***************98865554 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00024      0.21     130     154 ..      35      59 ..      30      67 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00024
       T2SSE 130 glilvsGgTgsGKttllyallkein 154
                 ++i ++G  gsGK+tl +a+++++n
  KHJ31309.1  35 CIIGIAGSSGSGKSTLSNAIVNKMN 59 
                 56779****************9987 PP

>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00068      0.58       3      26 ..      35      58 ..      33      69 .. 0.88
   2 ?   -1.0   0.0       1.7   1.4e+03     103     147 ..     158     206 ..     153     212 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00068
                EEEEEESSTTSSHHHHHHHHHHHH CS
  APS_kinase  3 vvvwltGlsgsGKstianalekkL 26
                +++ ++G sgsGKst++na+ +k+
  KHJ31309.1 35 CIIGIAGSSGSGKSTLSNAIVNKM 58
                78999**************98876 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.7
                 EEEEEE--HHHHHHH.TTTSHHHHHH..TTSSSS.HTTTSS-----SS- CS
  APS_kinase 103 ievfvdtplevceer.DpkglYkkar..eGeike.ftGidspYeaPenp 147
                 +++f++++ ++c +r   + l +++r  eG ik+ f+ +  +Ye+  +p
  KHJ31309.1 158 MKIFCEADTDTCLSRrILRDLKERGRdvEGCIKQwFSFVKPNYERFVEP 206
                 5799999999997651568888888844588887466777778876666 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00029      0.24      26      50 ..      37      60 ..      37     111 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00029
       DUF87 26 lAilgsTGsGKSntvavLleellek 50
                ++i gs+GsGKS++   +++++   
  KHJ31309.1 37 IGIAGSSGSGKSTLSNAIVNKMN-L 60
                5899*************999987.3 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0    0.0015       1.2       1      26 [.      37      62 ..      37      78 .. 0.88
   2 ?    0.5   0.0      0.51   4.4e+02     129     157 ..     155     184 ..     149     215 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0015
                    EEEE-STTSSHHHHHHHHHHHHT-EE CS
  Cytidylate_kin  1 iaiDGPagsGKssvaralaeklglky 26
                    i i G +gsGKs+++ a+ +k++l +
      KHJ31309.1 37 IGIAGSSGSGKSTLSNAIVNKMNLPW 62
                    6799****************999865 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.51
                     T-SEEEEEE--HHHHHHHHH.HHHHHTT-- CS
  Cytidylate_kin 129 daelKifldAsveeRakRRl.kqlkakgts 157
                       ++Kif +A +++  +RR+ ++lk++g +
      KHJ31309.1 155 LLDMKIFCEADTDTCLSRRIlRDLKERGRD 184
                     5689**********9999962677776655 PP

>> CoaE  Dephospho-CoA kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1   0.00083      0.71       2      23 ..      36      58 ..      35      69 .. 0.85
   2 ?   -1.7   0.0       2.3     2e+03     121     145 ..     259     283 ..     217     288 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00083
                EEEEEESTTSSHHHHHHHHHH.T CS
        CoaE  2 ivgltGgiasGKstvanlfad.l 23
                i+g++G  +sGKst++n++ + +
  KHJ31309.1 36 IIGIAGSSGSGKSTLSNAIVNkM 58
                8***************9987645 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 2.3
                 GSSEEEEEE--HHHHHHHHHHCCTS CS
        CoaE 121 liervlvvdvelelqveRlvardgv 145
                 l ++v+++d +++lqv  ++ +d +
  KHJ31309.1 259 LSQNVVIIDDTPQLQVMNTIIQDRM 283
                 4456777777777777777666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        87  (0.00485247); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 3505.47
//
Query:       KHJ31310.1  [L=670]
Description: putative alternative nadh dehydrogenase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-43  148.6   0.0    6.8e-43  147.0   0.0    1.7  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
    2.9e-12   47.0   0.6    2.5e-08   34.3   0.0    3.4  3  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase
    3.5e-07   29.3   1.7    1.6e-06   27.2   0.1    2.7  3  EF-hand_1      EF hand
    2.7e-06   26.8   1.2    1.4e-05   24.6   0.3    2.7  3  EF-hand_6      EF-hand domain
    0.00032   21.1   0.5     0.0012   19.3   0.2    2.2  2  EF-hand_7      EF-hand domain pair
    0.00088   18.7   0.3    0.00088   18.7   0.3    2.4  3  EF-hand_5      EF hand
     0.0035   17.2   0.0      0.031   14.1   0.0    2.5  3  EF-hand_8      EF-hand domain pair
  ------ inclusion threshold ------
      0.047   13.6   0.2       0.21   11.6   0.0    2.1  2  EF-hand_4      Cytoskeletal-regulatory complex EF hand
      0.068   12.4   0.5        1.9    7.6   0.5    2.4  1  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
      0.084   13.1   0.0        4.6    7.6   0.0    2.8  2  NAD_binding_8  NAD(P)-binding Rossmann-like domain


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.83   1.5e+03     142     153 ..      59      81 ..      40      83 .. 0.69
   2 !  147.0   0.0   3.8e-46   6.8e-43       2     279 ..     147     466 ..     146     487 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.83
                  T...........SEEEEES-SHH CS
                  x...........xxxxxxxxxxx RF
  Pyr_redox_2 142 p...........krivvvGgGyi 153
                  p           +++++vGg+++
   KHJ31310.1  59 PserpryvnviyRSVAIVGGSFT 81 
                  355556666777999*****987 PP

  == domain 2  score: 147.0 bits;  conditional E-value: 3.8e-46
                  SEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHH...HHHHCHHHHCCCCHCCTCEEEEESCEEEEETEEEC...T CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...x RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcllskallgvaedaeias...evvkklnqgielllgeevvkidpgkkkvklekkke...g 93 
                  ++vv+GgG++G+a+ +tl   ++ vt+v + ++ +++++ll++a  g+ e ++ ++   + v++++ ++++  + e v++   +k v++++ +    +
   KHJ31310.1 147 KLVVLGGGWGGVALLKTLEPDKYHVTVV-SPTNYFLFTPLLPSATNGTLELRSLVEpirRIVNRIQGHFIRARA-ETVEF--SEKLVEVSQIDHngkK 240
                  79**************************.999999999**************9999999888999988443333.45555..4444444333334456 PP

                  CEEEEEESEEEE---EEE-BCTCTTC.TTBEECCSECHHHHHHCCSS-T..................SEEEEES-SHHHHHHHHHHHHHT-....... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................xxxxxxxxxxxxxxxxxxxxxxxx....... RF
  Pyr_redox_2  94 deekiaydklvlAtGssprdlgipGvaenvgklvrtldsaealklkllp..................krivvvGgGyiGvElAaalaklgk....... 166
                  + + + ydkl++  Gs+++  g++G+ en+++l + + +a+++k   l                    ++v++GgG++GvE+Aa+la+l         
   KHJ31310.1 241 QSFYLPYDKLIISVGSTANSHGVQGL-ENCHFL-KDIGDAQRIKNRILSnlesaclpttsdeerrrlLSFVICGGGPTGVEFAAELADLLNedltlnf 336
                  7778999*******************.***999.***************9***********999766667******************9555899999 PP

                  ........EEEEEESSSSSSTTS-HHHHHHHHHHHHHTTEEEEESCEEEEEEETTEEEEEEETTSCE....EEESEEEE-S-EEES-HHCS..HCCT- CS
                  ........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxx..xxxxx RF
  Pyr_redox_2 167 ........evtlveardrllraldkelsaaleealekeGvevklgtsvkeidgngeklevvledgee....idadlvvvavGvrpstelle..eklgl 250
                           ++l++ r ++l+++d+++s+++e+++ ++ +++ + ++vke+++++   + +le+g+     i++  +++++Gv+     +     lg 
   KHJ31310.1 337 pkllrneiSIHLIQSRGHILNTYDESISKYAEQRFARDQINLLTDSRVKEVQSDKIFFTQKLENGQLitkeIPMGFCLWSTGVSQTEFCQRisAILGQ 434
                  99999988899********************************************9666889999888889***************9998899999** PP

                  EEEETTEEE--TTSB...ESSTTEEE-GGGCT CS
                  xxxxxxxxxxxxxxx...xxxxxxxxxxxxxx RF
  Pyr_redox_2 251 elderggivvdeflr...tnvpgiyaiGDvag 279
                  + ++r ++++d +lr   t   ++yaiGD+a 
   KHJ31310.1 435 AQKNRHALETDTHLRlngTPLGDVYAIGDCAT 466
                  **************85456799*********2 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.2       6.7   1.2e+04       1       9 [.      72      80 ..      72      81 .. 0.85
   2 !    9.0   0.0    0.0011         2       1      38 [.     147     186 ..     147     196 .. 0.87
   3 !   34.3   0.0   1.4e-11   2.5e-08       2      69 ..     308     390 ..     307     396 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 6.7
                EEEEECSSH CS
   Pyr_redox  1 kvvvvGgGy 9 
                +v++vGg++
  KHJ31310.1 72 SVAIVGGSF 80
                699****98 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0011
                 EEEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSS..TTS CS
   Pyr_redox   1 kvvvvGgGyiglElAgalaelgkkVtvversdkll..rll 38 
                 k+vv+GgG+ g+ l ++l   + +Vtvv   + +l  +ll
  KHJ31310.1 147 KLVVLGGGWGGVALLKTLEPDKYHVTVVSPTNYFLftPLL 186
                 68***************************99999865555 PP

  == domain 3  score: 34.3 bits;  conditional E-value: 1.4e-11
                 EEEECSSHHHHHHHHHH.........HHTT........SEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEECSEEEEEEEEE CS
   Pyr_redox   2 vvvvGgGyiglElAgal.........aelg........kkVtvversdkllrllDeeaskilqeklekngievllntkveeiegs 69 
                  v+ GgG +g+E+A++l            +         ++++++ + ++l+ +De +sk+ ++++ +  i++l++++v+e++ +
  KHJ31310.1 308 FVICGGGPTGVEFAAELadllnedltL--NfpkllrneISIHLIQSRGHILNTYDESISKYAEQRFARDQINLLTDSRVKEVQSD 390
                 69***************6666655550..055555544688*****************************************965 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.58     1e+03      16      25 ..     494     503 ..     492     506 .. 0.84
   2 !   27.2   0.1     9e-10   1.6e-06       2      26 ..     521     545 ..     520     548 .. 0.93
   3 ?   -3.4   0.1       5.6     1e+04       3      10 ..     595     602 ..     595     603 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.58
                 EEEHHHHHHH CS
   EF-hand_1  16 kIdfeEfkel 25 
                 +I+f E++++
  KHJ31310.1 494 QITFAEWRSI 503
                 7******987 PP

  == domain 2  score: 27.2 bits;  conditional E-value: 9e-10
                 HHHHHHHHTTTSSSEEEHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkell 26 
                 l+++F+++D D++G++df+E+++ll
  KHJ31310.1 521 LDKLFKVYDIDNSGTLDFNELRQLL 545
                 89*********************98 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 5.6
                 HHHHHHHT CS
   EF-hand_1   3 keiFrefD 10 
                 + +Fr fD
  KHJ31310.1 595 DAVFRTFD 602
                 578****9 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.9   5.2e+03      14      26 ..     492     504 ..     490     508 .. 0.82
   2 !   24.6   0.3     8e-09   1.4e-05       1      27 [.     520     546 ..     520     555 .. 0.90
   3 ?   -2.9   0.1       5.4   9.7e+03       4      11 ..     596     603 ..     595     608 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.9
   EF-hand_6  14 dGkidaeElrkal 26 
                 + +i+++E+r++ 
  KHJ31310.1 492 NMQITFAEWRSIA 504
                 568*****99875 PP

  == domain 2  score: 24.6 bits;  conditional E-value: 8e-09
   EF-hand_6   1 elreaFklfDkdgdGkidaeElrkalr 27 
                 +l+++Fk +D d++G++d++Elr++l 
  KHJ31310.1 520 RLDKLFKVYDIDNSGTLDFNELRQLLI 546
                 5889********************996 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 5.4
   EF-hand_6   4 eaFklfDk 11 
                 ++F+ fD+
  KHJ31310.1 596 AVFRTFDY 603
                 68****97 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       7.3   1.3e+04      27      47 ..     206     229 ..     191     239 .. 0.50
   2 !   19.3   0.2   6.6e-07    0.0012       3      59 ..     520     607 ..     518     611 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 7.3
   EF-hand_7  27 llrkifqga....gegsklsdeele 47 
                 ++ +i  ++     e++++s+ +l 
  KHJ31310.1 206 IVNRIQGHFirarAETVEFSE-KLV 229
                 444444333666666666665.333 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 6.6e-07
   EF-hand_7   3 klkeaFkelDtdgdgyldkeellrllrkifqga...............................gegsklsdeelellfkefDtdkdG 59 
                 +l   Fk +D d++g ld +el++ll +i+ +                                + +++++ +  +++f+ fD ++ G
  KHJ31310.1 520 RLDKLFKVYDIDNSGTLDFNELRQLLIQIDRKLtslpataqrahqqgqylgyklnaiarasaglRVNDVKDGDVDDAVFRTFDYRHLG 607
                 67889**********************9998888888888888888888888888888888886444443333334888888877655 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       4.3   7.7e+03      15      23 ..     494     502 ..     494     503 .. 0.83
   2 !   18.7   0.3   4.9e-07   0.00088       1      25 []     521     545 ..     521     545 .. 0.93
   3 ?   -3.1   0.4       3.8   6.8e+03       3       9 ..     596     602 ..     594     603 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4.3
                 CE-HHHHHH CS
   EF-hand_5  15 kIskeELkt 23 
                 +I++ E++ 
  KHJ31310.1 494 QITFAEWRS 502
                 599****86 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 4.9e-07
                 HHHHHHHH-SS-SSCE-HHHHHHHH CS
   EF-hand_5   1 lkdtFqaiDlNgDGkIskeELktlv 25 
                 l+++F+  D +++G++++ EL++l+
  KHJ31310.1 521 LDKLFKVYDIDNSGTLDFNELRQLL 545
                 6899******************985 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 3.8
                 HHHHHH- CS
   EF-hand_5   3 dtFqaiD 9  
                 ++F+ +D
  KHJ31310.1 596 AVFRTFD 602
                 59***99 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0         1   1.8e+03      43      51 ..     419     427 ..     418     428 .. 0.87
   2 !   14.1   0.0   1.8e-05     0.031       2      51 ..     492     544 ..     491     545 .. 0.74
   3 ?   -3.1   0.0       4.1   7.3e+03      29      43 ..     595     609 ..     593     611 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1
   EF-hand_8  43 isfeEFcvl 51 
                 +s++EFc++
  KHJ31310.1 419 VSQTEFCQR 427
                 89*****85 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 1.8e-05
   EF-hand_8   2 kgkItreelrrilrilglkk..glseee..vdilfrefDtdgdGkisfeEFcvl 51 
                 +++It++e r+i+   + k+  + +e+   +d lf+  D+d++G+++f+E  +l
  KHJ31310.1 492 NMQITFAEWRSIAQQ-VRKHfpQATEHLkrLDKLFKVYDIDNSGTLDFNELRQL 544
                 678888888888844.34456755555435899*****************9876 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 4.1
   EF-hand_8  29 dilfrefDtdgdGki 43 
                 d++fr+fD  + G +
  KHJ31310.1 595 DAVFRTFDYRHLGSL 609
                 678*****8888876 PP

>> EF-hand_4  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.5   4.4e+03      29      54 ..     374     398 ..     362     407 .. 0.65
   2 ?   11.6   0.0   0.00012      0.21      41      65 ..     517     541 ..     486     558 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.5
   EF-hand_4  29 dkvapvlknskleedklekiwdladi 54 
                 d++ ++l +s+++e + +ki+    +
  KHJ31310.1 374 DQI-NLLTDSRVKEVQSDKIFFTQKL 398
                 444.4677788888777777765544 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00012
   EF-hand_4  41 eedklekiwdladidedgkldfeef 65 
                 + ++l+k++++ did+ g+ldf+e+
  KHJ31310.1 517 HLKRLDKLFKVYDIDNSGTLDFNEL 541
                 457899*****************97 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.5    0.0011       1.9     168     257 ..     309     406 ..     308     447 .. 0.62

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0011
  Pyr_redox_3 168 vViGgknSavDaAlelvrk.gaeVtvvtrgseiekee...sdpsyslkpdienrleelvke....ekikvlfnaevkeikekeeeykvktedgkkvev 257
                  v+ Gg+ ++v+ A el++  + + t+  ++  +++ +    +   ++  ++ + + ++ ++    ++i++l++++vke++ ++  ++ k e+g+ +++
   KHJ31310.1 309 VICGGGPTGVEFAAELADLlNEDLTLNFPKLLRNEISihlIQSRGHILNTYDESISKYAEQrfarDQINLLTDSRVKEVQSDKIFFTQKLENGQLITK 406
                  67777777777777777766777777766543333321113334455555555555555556666778889999999988887777777888776666 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0025       4.6       1      25 [.     150     174 ..     150     180 .. 0.92
   2 ?    2.5   0.0     0.098   1.8e+02       1      17 [.     310     333 ..     310     368 .. 0.69

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0025
                    EE--SHHHHHHHHHHHCCTEEEEEE CS
  NAD_binding_8   1 IvGaGlsGlvaAylLakagfdvlll 25 
                    ++G+G +G ++  +L  ++++v+++
     KHJ31310.1 150 VLGGGWGGVALLKTLEPDKYHVTVV 174
                    89*********************97 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.098
                    EE--SHHHHHHHHHHH.......C CS
  NAD_binding_8   1 IvGaGlsGlvaAylLa.......k 17 
                    I G+G +G  +A++La        
     KHJ31310.1 310 ICGGGPTGVEFAAELAdllnedlT 333
                    66*************944444440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (670 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       823  (0.0459033); expected 358.6 (0.02)
Passed bias filter:                      701  (0.0390987); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.66u 0.30s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 4580.50
//
Query:       KHJ31311.1  [L=218]
Description: putative effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.008   15.9   0.1      0.015   15.0   0.1    1.5  1  TAFII55_N  TAFII55 protein conserved region
  ------ inclusion threshold ------
       0.08   13.8   0.0       0.16   12.9   0.0    1.5  1  DUF2437    Domain of unknown function (DUF2437)


Domain annotation for each model (and alignments):
>> TAFII55_N  TAFII55 protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   1.7e-06     0.015     109     137 ..     166     194 ..     123     212 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.7e-06
   TAFII55_N 109 kkkekkfqyphGitpPlknvrkrRFrkrl 137
                 +   ++   ++G+t+Pl  v +rRFr+++
  KHJ31311.1 166 SYIPTDSMTADGMTKPLARVAHRRFREQM 194
                 5567778899****************987 PP

>> DUF2437  Domain of unknown function (DUF2437)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.7e-05      0.16       3      28 ..     182     208 ..     182     217 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.7e-05
                 EEEEEETT.EEEEEEEE.EEEEEESS- CS
     DUF2437   3 iaRFshgg.gpryGvlegdtvvvlagd 28 
                 +aR++h   + + Gv+++dt+++l+g 
  KHJ31311.1 182 LARVAHRRfREQMGVVDEDTLQPLTGK 208
                 69************************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       380  (0.0211947); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1605.02
//
Query:       KHJ31312.1  [L=469]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        4.8    5.9   5.2       0.52    9.1   0.9    1.5  2  DUF4551   Protein of unknown function (DUF4551)


Domain annotation for each model (and alignments):
>> DUF4551  Protein of unknown function (DUF4551)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.2      0.27   4.8e+03     147     184 ..      18      55 ..       6      63 .. 0.45
   2 ?    9.1   0.9   2.9e-05      0.52     163     230 ..     121     191 ..     102     224 .. 0.70

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 0.27
     DUF4551 147 essldakekeektvskksqlslslselrklseeekeel 184
                  s+  + e + +++sk+  l+ sl+++ + +++ ++e+
  KHJ31312.1  18 TSTQLRAEASDPMPSKSGRLHPSLLSIANAMQQLETER 55 
                 32222333444444444444444444444444444333 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 2.9e-05
     DUF4551 163 ksqlslslselrklseeekeelesekalkslrsasrplPesllsrap..kpp.sspkeppssslskderds 230
                 +s  + +  +  +l e+++++++ +++  +  + s+ lP++++s  p  k+p  ++ke++s+ +++d+r  
  KHJ31312.1 121 QSLSEKPIHNNIQLDENKQNQRNYNTSWATVARKSAKLPQPPSSAIPlpKKPdGNKKETESNHPKEDKRLF 191
                 33444445777788888888888888888877777766666655555335556999999999999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       811  (0.045234); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3466.08
//
Query:       KHJ31313.1  [L=508]
Description: putative glycoside hydrolase family 72 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   3.1e-115  384.7   0.0   3.9e-115  384.4   0.0    1.1  1  Glyco_hydro_72   Glucanosyltransferase
     0.0022   17.2   0.0     0.0034   16.6   0.0    1.3  1  Glyco_hydro_2_C  Glycosyl hydrolases family 2, TIM barrel dom


Domain annotation for each model (and alignments):
>> Glyco_hydro_72  Glucanosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  384.4   0.0  4.4e-119  3.9e-115       8     312 ..      23     337 ..      17     340 .. 0.95

  Alignments for each domain:
  == domain 1  score: 384.4 bits;  conditional E-value: 4.4e-119
                     TS--EEEETTEEEETTT-BBE-EEEEE--BE---..---SSB-GGG-HHHHHHHHHHHHHHT-SEEEES---TTS--HHHHHHHHHTT-EEEEES CS
  Glyco_hydro_72   8 aveaieikgnkffdsksgeqfyikGvdyqpggse..evsslvdpladaeaCkrdikllkelgvntvrvyavdnskdhdeCmkalsdagiyvildl 100
                     av +i+i+++kf+ds +g++f i Gv+yqpggs+  +  s vdpl+d ++C rd++l+++lgvn++rvy+vd+  +hd C +++++ giy+++d+
      KHJ31313.1  23 AVAPISIQDQKFVDSVTGNEFKIVGVAYQPGGSSgyNPGSGVDPLSDGDICLRDAALMQQLGVNALRVYNVDPAINHDMCASIFNEVGIYLLIDV 117
                     578******************************95444899****************************************************** PP

                     -BT..TBS--TTS-..---HHHHHHHHHHHHHHTT-TTEEEEEEEESSS-STT-GG.GHHHHHHHHHHHHHHHHHSSS----EEEEE---TTTHH CS
  Glyco_hydro_72 101 nep..kesinradpassynedllervfkvidafkeyknvlgffaGnevvndksnta.asayvkavvrdvkeyikkkkerkiPvGysaaddaelrv 192
                     n+p   es+nr+ p ssyn+ +l+r f+v+++fk+y+n+l ff+Gnev+nd  ++a  ++y++av+rd+k+yi k+++rkiPvGysaad++e+ v
      KHJ31313.1 118 NSPlnGESLNRKAPGSSYNVGYLQRTFAVVESFKNYPNTLLFFSGNEVINDVPTAAnVPPYLRAVTRDIKNYIAKNSKRKIPVGYSAADVREILV 212
                     **98889********************************************988774789*********************************** PP

                     HHHHHTTBTT-.......--S-EEEEE----SS--HHHHSHHHHHHHHTT-SS-EEEEEE---SSSS---THHHHHTSHHHHTTEEEEEES-SB- CS
  Glyco_hydro_72 193 elaeylaCgded.....dkadffglnmyeWCgkssfktsGydertkefenysiPlflseyGCnkvtprkftevealyseemtsvfsGGlvyeyse 282
                     ++++yl+C  +      ++ dff+ln+y+WCg+ssf+ +Gyd  +++f++ s+P+f+seyGCn v+pr+ftev aly+     v +GG+vyeys+
      KHJ31313.1 213 DTFNYLQCSMTGddtdpSRGDFFALNSYSWCGNSSFTKAGYDVLISDFKESSVPVFFSEYGCNAVSPRVFTEVPALYGPLAAPVLCGGVVYEYSQ 307
                     ********75443445569**************************************************************************** PP

                     -SSS--SEEE-TTS-EEE-THHHHHHHHHH CS
  Glyco_hydro_72 283 eannyGlvkiddddvkkllkdfenlkseyk 312
                     e +nyGlv++++d++ kl+ d+e+l+++++
      KHJ31313.1 308 EPSNYGLVELNSDGSAKLKLDYESLQTQIS 337
                     **************************9986 PP

>> Glyco_hydro_2_C  Glycosyl hydrolases family 2, TIM barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   3.7e-07    0.0034      36     141 ..      71     182 ..      67     308 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 3.7e-07
                      HHHHHHHHHHHHCT--EEEETTS.-..-SHHHHHHHHHHT-EEEEE-S-B-TTSCCCCSHCT-CCCCTTTSGGGHHHHHHHHHHHHHHHTT-TT CS
  Glyco_hydro_2_C  36 ellvkDlkllkqlniNavRtsHY.P..nqeevyelcDeyGlyvidEanlethglaqklgeiepsynvladnpewlkavldrieelverdkNHps 126
                      +  ++D +l++ql++Na R     P  n+     ++ e G+y++ + n         l+  ++s n++a    ++  +l+r   +ve  kN p 
       KHJ31313.1  71 DICLRDAALMQQLGVNALRVYNVdPaiNHDMCASIFNEVGIYLLIDVNS-------PLN--GESLNRKAPGSSYNVGYLQRTFAVVESFKNYPN 155
                      56689**************866435558889999********9866553.......333..3456778889999******************** PP

                      EEEEEEEESS............CHHHH CS
  Glyco_hydro_2_C 127 viiWSlgNEs............gaged 141
                       ++   gNE             + ++ 
       KHJ31313.1 156 TLLFFSGNEVindvptaanvppYLRAV 182
                      *********966666555444433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       381  (0.0212505); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 3403.70
//
Query:       KHJ31314.1  [L=269]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 2035.83
//
Query:       KHJ31315.1  [L=426]
Description: hypothetical protein EV44_g4802 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-14   53.4   0.9    4.9e-14   52.3   0.9    1.6  1  MBOAT_2   Membrane bound O-acyl transferase family


Domain annotation for each model (and alignments):
>> MBOAT_2  Membrane bound O-acyl transferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   0.9   2.8e-18   4.9e-14       5      81 ..     238     321 ..     233     323 .. 0.82

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 2.8e-18
     MBOAT_2   5 fgsllea..yslrrfWgrfWHqlfrrglkstakkilrlllg..sk.larylqllvaFllSGllHaagdytqlap..estallfF 81 
                  g++++    +l ++Wg fWHq+fr++++++++++l++      k +++++ l +aF+lSGllH+a  +t++++  +s ++lfF
  KHJ31315.1 238 WGDFSNVfdRGLGGLWGNFWHQTFRNFFTAPTSYLLKKGYIkpGKfTTKLTGLAFAFILSGLLHYASMFTVFGDayPSNEILFF 321
                 55555542269************************999777453369*************************976666688888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       855  (0.0476881); expected 358.6 (0.02)
Passed bias filter:                      627  (0.0349713); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 2950.79
//
Query:       KHJ31316.1  [L=103]
Description: hypothetical protein EV44_g3380 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       940  (0.052429); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 781.54
//
Query:       KHJ31317.1  [L=208]
Description: hypothetical protein EV44_g4192 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 1628.48
//
Query:       KHJ31318.1  [L=265]
Description: putative wsc domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-12   46.4   6.3    5.9e-12   45.6   6.3    1.4  1  WSC       WSC domain
  ------ inclusion threshold ------
      0.066   12.6   0.7       0.18   11.2   0.7    1.7  1  SKG6      Transmembrane alpha-helix domain


Domain annotation for each model (and alignments):
>> WSC  WSC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6   6.3   6.6e-16   5.9e-12       3      82 .]      29     102 ..      27     102 .. 0.90

  Alignments for each domain:
  == domain 1  score: 45.6 bits;  conditional E-value: 6.6e-16
         WSC   3 GCytdssesrrllgpssasdstmtpekCaafCkakgykyagledgseCyCgnslpaaavkassssCnasCsGdssqtCGg 82 
                 GC++++     +  +   s++ +++++C++ C  k  + ++++d+ +CyCg+slp++++  ++s+C+++C+G++s++CGg
  KHJ31318.1  29 GCFSST-----TGLSLAGSQTFNSIGSCSTLCLGKRAEAMAMQDS-DCYCGSSLPPTNAIIDDSKCSIPCPGYPSDLCGG 102
                 787744.....4555566788899*******************99.*********************************8 PP

>> SKG6  Transmembrane alpha-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.7     2e-05      0.18       6      26 ..     170     190 ..     167     200 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2e-05
        SKG6   6 nsntvaIavaVaVPVaViiiv 26 
                   n++ Ia++V+V++ + +++
  KHJ31318.1 170 PPNKAGIAAGVVVGLLAFAAI 190
                 5799**********9987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       742  (0.0413855); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.35
# Mc/sec: 2254.62
//
Query:       KHJ31319.1  [L=1491]
Description: putative udp-glucose:glycoprotein glucosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   3.3e-147  489.0   2.1   5.7e-147  488.3   2.1    1.4  1  Glyco_transf_24  Glucosyltransferase 24
      1e-65  222.3   3.1    6.5e-64  216.3   1.5    2.5  2  Thioredoxin_14   Thioredoxin-like domain
    2.4e-54  184.5   1.2    1.1e-51  175.7   0.4    2.7  2  Thioredoxin_15   Thioredoxin-like domain
      2e-47  161.5   1.1      1e-46  159.2   0.1    2.3  2  Thioredoxin_12   Thioredoxin-like domain
    6.8e-42  142.6   5.4    3.7e-39  133.8   0.8    3.9  4  Thioredoxin_13   Thioredoxin-like domain
      1e-41  141.4   0.0    2.3e-41  140.3   0.0    1.7  1  UDP-g_GGTase     UDP-glucose:Glycoprotein Glucosyltransferase
    4.9e-05   23.0   0.7      8e-05   22.3   0.0    1.6  2  Glyco_transf_8   Glycosyl transferase family 8
  ------ inclusion threshold ------
      0.058   11.8   0.3      0.096   11.0   0.3    1.2  1  ActA             ActA Protein
      0.092   12.8   0.5       0.33   11.0   0.5    1.9  1  AAA_14           AAA domain
       0.12   12.4   0.0       0.24   11.5   0.0    1.4  1  TRIF-NTD         TRIF N-terminal domain


Domain annotation for each model (and alignments):
>> Glyco_transf_24  Glucosyltransferase 24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  488.3   2.1  3.2e-150  5.7e-147       1     267 [.    1188    1454 ..    1188    1455 .. 0.99

  Alignments for each domain:
  == domain 1  score: 488.3 bits;  conditional E-value: 3.2e-150
  Glyco_transf_24    1 inifsvasGklyerllkimilsvlkktkksvkfwlienflspkfkellpklakkygfeyelvtykwPkwlrkqkekqriiwgykilfldvlf 92  
                       inifsvasG+lyer+l+imi+sv+k+tk+svkfw+ie+fls++fke++p+la++y+f+ye+vty+wP+wlr+q+ekqr iwgykilfldvlf
       KHJ31319.1 1188 INIFSVASGHLYERMLNIMIVSVMKNTKHSVKFWFIEQFLSSSFKEFIPYLAEEYNFSYEMVTYRWPHWLRAQSEKQREIWGYKILFLDVLF 1279
                       89****************************************************************************************** PP

  Glyco_transf_24   93 PldldkvifvdadqvvradlkelveldlegapygytPlcdsrkemegfrfwkqgywkehlkgkkyhisalyvvdlkrfrklaagdrlraqyq 184 
                       Pl+l+kvifvd+dq++radl el++ldl+gapyg+tP+cdsr+emegfrfwk+gyw+e l+g +yhisalyvvdl+rfr++aagdrlr+qy+
       KHJ31319.1 1280 PLSLNKVIFVDSDQIIRADLIELINLDLNGAPYGFTPMCDSRTEMEGFRFWKKGYWAEFLRGLPYHISALYVVDLRRFRQMAAGDRLRQQYH 1371
                       ******************************************************************************************** PP

  Glyco_transf_24  185 klsadpnslanldqdlPnnlqeevpifslpqewlwcetwcsdeskkkaktidlcnnPltkepklerakrlieeweeldeevke 267 
                       +lsadp sl+nldqdlPn++q+ +pi+slpqewlwcetwcsde++k+aktidlcnnPltkepklera+r+++ew+++d+e+++
       KHJ31319.1 1372 ALSADPGSLSNLDQDLPNHMQKVLPIYSLPQEWLWCETWCSDEALKDAKTIDLCNNPLTKEPKLERARRQVPEWTKFDDEIAA 1454
                       ********************************************************************************987 PP

>> Thioredoxin_14  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.3   1.5   3.6e-67   6.5e-64       1     254 []     414     660 ..     414     660 .. 0.90
   2 ?    4.9   0.0     0.012        22      50     125 ..     700     775 ..     687     802 .. 0.74

  Alignments for each domain:
  == domain 1  score: 216.3 bits;  conditional E-value: 3.6e-67
                     B---SGGGTTTS---S--SSS-SSSTTS---HHHHHS--SSS.----SS--EEEEEEEESS-HHHHHHHHTHHHHHHHTT-SEEEEEEEE-..SS CS
  Thioredoxin_14   1 fdirdrkeggdailwlNdLEkDkrYsrWpsslqellrplypgqlpsirkNlfnlVlvlDlsqredllelltllqsfiqrniPiRfGlVplvsses 95 
                     fd++d++egg++i+wlN++EkD rY++Wp sl ++l++ ypgqlp++r+++fnlV+++Dl+++ dl+++l+++ +f++r++PiR+Gl+p++  ++
      KHJ31319.1 414 FDWTDKTEGGNVIIWLNNIEKDRRYADWPVSLAAMLQRGYPGQLPFVRRDAFNLVIPIDLTDQLDLELILETALNFVNRRLPIRIGLIPVI--RN 506
                     8******************************************************************************************..55 PP

                     HHHHHHHHHHHHHHHTT-HHHHHHHHHHHH..HT-SSS--...HHHHHHHHHHH..........SS----TT...........TTHHHHHHHHHH CS
  Thioredoxin_14  96 edskklaklfyylaenygakaalefltaleakakkskepdlt.kevvesafkea..........ldealkseveeileaeitseydealkasref 179
                     +++   ak++y+l+e yg+++a+++l++ ++++ +     l+ k+v+++++++a          +de+lks+           e+++++++s+++
      KHJ31319.1 507 SNAAIEAKVIYHLIEIYGLQTAIAYLRSQNESKLS-----LNsKDVFDQITQKAkiktnktriiFDEVLKSD-----------ELESRIQSSQKW 585
                     56889999********************3322222.....22388999999888777777777777777777...........78999******* PP

                     HHHTT--SSS-EEEE.TTEEEESSSSHHHHHHHHHHHHHHHHHHHHHTT---S...S--GGGGT..TTS-BSS--TTT CS
  Thioredoxin_14 180 ikrlglkeaqepvfllNGvvlpfdekweqallaelqedlqelqkavyegiltd...dddvkdllldlegalkrrnpli 254
                     ++r+ ++++ +pv++ NGvv+p+de w+q ++++++ dlq +q+ +  g+ +    d +v++++  l++a+ rrn+li
      KHJ31319.1 586 VDRICADDLVPPVII-NGVVIPKDEFWLQKMSQQIYTDLQLIQQTIVLGTENVrsqDFWVPSIF--LNQAINRRNKLI 660
                     ****99999899999.******************************9888664444679*****..**********98 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.012
                     --EEEEEEEESS-HHHHHHHHTHHHHHHHTT-SEEEEEEEE-..SSHHHHHHHH.HHHHHHH.TT-HHHHHHHHHH.HH CS
  Thioredoxin_14  50 NlfnlVlvlDlsqredllelltllqsfiqrniPiRfGlVplvssesedskklak.lfyylae.nygakaaleflta.le 125
                     +++ ++l++Dl++ e +++llt++  +++++  i + ++ + ++es  + kl+  lf+yl + n +  +a+e +ta l+
      KHJ31319.1 700 DIIFMILIVDLDS-EMGENLLTNAATLYKKSPSIELLILHNPATES--KPKLSHgLFNYLENnNLNGLEAVENMTAtLY 775
                     667789******8.****************9888877777664444..4455556*****9976666677777776544 PP

>> Thioredoxin_15  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0036       6.5      36     159 ..     472     606 ..     461     613 .. 0.68
   2 !  175.7   0.4   6.4e-55   1.1e-51       1     213 []     672     875 ..     672     875 .. 0.95

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0036
                     -TTSHHHHHH.HHHHHHHHHH-TTEEEEEEE--S--SS-THH...........HHHHHHHTGGGGCT-SSHHHHHHHHH.............--- CS
  Thioredoxin_15  36 DldseeGrkL.LleAlkflksspgvRlgiihnpssdseassl...........issalsaalkklknlealefleklleeeteellvsgmd.kda 117
                     Dl+++  ++L L +Al+f+ +   +R+g+i   ++++ a ++           +++a+  +l+++++++     +++ ++ t+++++++ + +  
      KHJ31319.1 472 DLTDQLDLELiLETALNFVNRRLPIRIGLIPVIRNSNAAIEAkviyhlieiygLQTAIA-YLRSQNESKLSLNSKDVFDQITQKAKIKTNKtRII 565
                     666666666525679*************9998888855433333466666555444444.55555555555544455554444555554441456 PP

                     ----HH......HHHHHHHHHHHTT--TT-EEEEETTEEEEE CS
  Thioredoxin_15 118 fekelnaeeakdylkalqkflrvlglepgqnavilNGRvvgp 159
                     f++ l+++e +  +++ qk +  +  +     vi+NG v+ p
      KHJ31319.1 566 FDEVLKSDELESRIQSSQKWVDRICADDLVPPVIINGVVI-P 606
                     7777789******************************998.4 PP

  == domain 2  score: 175.7 bits;  conditional E-value: 6.4e-55
                     -HHHHHHHTHHHHTSS-EE---S-..TTT-EEEEEEE-TTSHHHHHHHHHHHHHHHH-TTEEEEEEE--S--SS-THHHHHHHHHTGGGGCT-SS CS
  Thioredoxin_15   1 dlsklysehaslfeklpylesssd..klkpvtlwvvaDldseeGrkLLleAlkflksspgvRlgiihnpssdseasslissalsaalkklknlea 93 
                     dl++++++++++f++lp++++ss+  +++ + +++++Dldse G +LL++A+   k+sp+++l i+hnp+++s+ ++l s+ l  ++++++nl+ 
      KHJ31319.1 672 DLNSIEKKSSEFFKDLPRFSASSSvtNSDIIFMILIVDLDSEMGENLLTNAATLYKKSPSIELLILHNPATESK-PKL-SHGLF-NYLENNNLNG 763
                     7899***************6665556**********************************************99.777.79999.8999999999 PP

                     HHHHHHHHH............-------HH......HHHHHHHHHHHTT--TT-EEEEETTEEEEEESSTTSS-HHHHHHHHHHHHHHTHHHHHH CS
  Thioredoxin_15  94 lefleklleeeteellvsgmdkdafekelnaeeakdylkalqkflrvlglepgqnavilNGRvvgpidedeefsaeDfelLesyerkkrikpvve 188
                     le++e++              +++f+++++  e+k y+++ +++ r lgl pgqna+++NGR++gpi +++ ++ eD+elL s+er++r++p+++
      KHJ31319.1 764 LEAVENMTA--------TLYGQQSFHESTKLGESKIYWQKFAPISRLLGLVPGQNAILVNGRLIGPILNSKYLQMEDLELLISFERNRRVTPIFT 850
                     999999999........44668899999999**************************************************************** PP

                     HHHHHT-TTS--SHHHHHHHHHHHH CS
  Thioredoxin_15 189 aieelgleskisdsdlvakvtSlva 213
                     a+++l+le+ki+d++ +ak++S++a
      KHJ31319.1 851 ALKDLKLEDKIQDPLKAAKLSSIIA 875
                     ***********************97 PP

>> Thioredoxin_12  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.2   0.1   5.8e-50     1e-46       1     190 [.      41     226 ..      41     228 .. 0.94
   2 ?    0.4   0.1      0.27   4.9e+02     157     191 ..    1227    1263 ..    1224    1264 .. 0.86

  Alignments for each domain:
  == domain 1  score: 159.2 bits;  conditional E-value: 5.8e-50
                     ---HHHHHHHHHSSS-HHHHHHHHHHH...HTTGGGS--SHHHHHHHHHHHHHH..S-.-HHHHHHHHHHHHHTTTHHHHHHHHHHHHHTT.... CS
  Thioredoxin_12   1 atPlllealEtlakenedlFwefvdaleelaeeesaesssdkelyeailklaes..ll.seealslfelsLalrsasPrieafyqlaeeslssl. 91 
                     a+P+lle+lEt+ +en++++++++d++   +++ +a++s+d+ely+++lk++ +  +l ++ea+s+ +l+L+lr  +Prie++yq++++s++++ 
      KHJ31319.1  41 APPFLLELLETAGSENSSSYFPLLDKI---SDGIFASASTDEELYKKFLKVLLDegHLaDPEAVSSYQLALSLRLSTPRIESHYQYYNTSVETSi 132
                     79*************************...69********************9889999********************************9998 PP

                     ..GGGSS-SSEEEETTEEESSTT.------B...--SS-STS--TT---BS....--SEEEEEEE--SSTTSHHHHHHHHHHHHHTSEEEEEEE- CS
  Thioredoxin_12  92 ..enekkCkswvdvggelvcdveeleallkkekaassseqpellpfDhvypgskeasspvaILYgdlgskefkefhkkLkelakegkvkYvlRhv 184
                       en+++C++w+ ++g ++c+++ l+++ ++   as + + + l fD+v+ g+k  s+p  IL++d++s++f +fhk L+++a++gk +Y++Rh 
      KHJ31319.1 133 tpENDSSCSTWFLFQGLKFCSPS-LDKASGS---ASLDLKGDELLFDRVL-GNK--SAPATILFADITSPKFGAFHKLLAKNARDGKSSYRVRHR 220
                     7766667****************.9999999...999999999*******.553..59************************************9 PP

                     --TTS- CS
  Thioredoxin_12 185 ppsgse 190
                      +++se
      KHJ31319.1 221 KSQTSE 226
                     888765 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.27
                      SSTTSHHHHHHHHHHH..HHTSEEEEEEE---TTS-- CS
  Thioredoxin_12  157 gskefkefhkkLkela..kegkvkYvlRhvppsgses 191 
                       s++fkef  +L+e    +   v+Y++ h+++++se+
      KHJ31319.1 1227 LSSSFKEFIPYLAEEYnfSYEMVTYRWPHWLRAQSEK 1263
                      589************9776678********9998876 PP

>> Thioredoxin_13  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.8   0.8     2e-42   3.7e-39       4     132 ..     279     407 ..     276     410 .. 0.97
   2 !    7.4   0.0    0.0022       3.9      54     117 ..     571     638 ..     561     656 .. 0.88
   3 ?    0.1   0.0      0.39     7e+02      70      86 ..     805     821 ..     790     884 .. 0.70
   4 ?   -3.0   0.0       3.5   6.3e+03      34      49 ..    1379    1394 ..    1375    1396 .. 0.87

  Alignments for each domain:
  == domain 1  score: 133.8 bits;  conditional E-value: 2e-42
                     -SS----SSGGTTHHHHHHHHHHHHSSHHHHHHHHHHTGGGGSTTCS-SSTTTTTTTTTHHHHHHS--TT--EEEETTEEE-GGG-SHHHHHHHH CS
  Thioredoxin_13   4 edlkpLkawelqdLglqaaqlImssedpLkaLsdlsqnFPkyassLarvkvseelreeieanqerlvqpgqnalwlNGvaldesdidpfsLldlL 98 
                     +dlkpL+ +el++L ++a ++Im+se+pL++L +lsq+FP y+++++++++s ++ +e ++n+++ +++g+n +w+NG+ l+e++++++ L+d++
      KHJ31319.1 279 NDLKPLSTSELSSLAVKASSYIMQSESPLDTLLKLSQDFPRYSQTISSHNISLDFITEFQYNRAQSIEGGRNNIWINGLPLTERQMQIMDLIDIM 373
                     5799******************************************************************************************* PP

                     HHHHHHHHHHGGGS--HHHHHHHHT-HHHHHHHH CS
  Thioredoxin_13  99 rkErkllnslkklglsseqaskllthpalakaks 132
                     rkErk++++++++g+++++a+kll h+++ +a++
      KHJ31319.1 374 RKERKIISGMSDIGFTPSEAIKLLLHKEIVSAQT 407
                     ****************************987775 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0022
                     TTTTTTTTTHHHHHHS....--TT--EEEETTEEE-GGG-SHHHHHHHHHHHHHHHHHHGGGS--HHH CS
  Thioredoxin_13  54 vseelreeieanqerl....vqpgqnalwlNGvaldesdidpfsLldlLrkErkllnslkklglsseq 117
                     +s+el++ i+ +q+ +     +     +++NGv ++++++ + ++ + +  + +l+++   lg ++ +
      KHJ31319.1 571 KSDELESRIQSSQKWVdricADDLVPPVIINGVVIPKDEFWLQKMSQQIYTDLQLIQQTIVLGTENVR 638
                     5789999******999999999999********************************98888766555 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.39
                     --TT--EEEETTEEE-G CS
  Thioredoxin_13  70 vqpgqnalwlNGvalde 86 
                     + pgqna+++NG+ + +
      KHJ31319.1 805 LVPGQNAILVNGRLIGP 821
                     45899999999988754 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 3.5
                      HHHHHHHTGGGGSTTC CS
  Thioredoxin_13   34 aLsdlsqnFPkyassL 49  
                      +Ls+l q++P++ +++
      KHJ31319.1 1379 SLSNLDQDLPNHMQKV 1394
                      6999*******99876 PP

>> UDP-g_GGTase  UDP-glucose:Glycoprotein Glucosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.3   0.0   1.3e-44   2.3e-41       1     109 []    1045    1154 ..    1045    1154 .. 0.97

  Alignments for each domain:
  == domain 1  score: 140.3 bits;  conditional E-value: 1.3e-44
                    EEE-EEESS----TT-EEEEE-SS-S-SEEEE--SGGGEEEEEE-SEEEEEEE-TTHHHHHEEEEE--SS-S.--TT----EEEE-STT-EEE-- CS
  UDP-g_GGTase    1 eGhardettkspprGlqleLgtekkksvaDTivmanlGYfQlkanPGvwklelregrssdiyeiesvgaegl.sspkdegkevvltsfegktlyp 94  
                    eGh+r++  ++pprG+ql Lgt+k++ + DTi+m+nlGYfQ+kanPG+++++l++grs diy+i+s+ga+g+ s+p+d+++evvl+sf+g t++p
    KHJ31319.1 1045 EGHSREVVGDQPPRGTQLILGTKKNPYIGDTIIMSNLGYFQFKANPGYYSISLQKGRSFDIYHIDSIGASGWsSVPGDDKTEVVLMSFKGATIFP 1139
                    8***********************************************************************66666999*************** PP

                    EEEE-TT----TTS- CS
  UDP-g_GGTase   95 rvkrkpgkekedvle 109 
                    r++rkpg+e+edvle
    KHJ31319.1 1140 RLSRKPGMEREDVLE 1154
                    *************96 PP

>> Glyco_transf_8  Glycosyl transferase family 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.2       5.5   9.9e+03      16      69 ..     527     578 ..     522     583 .. 0.69
   2 !   22.3   0.0   4.5e-08     8e-05      13     134 ..    1202    1314 ..    1191    1413 .. 0.79

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 5.5
  Glyco_transf_8  16 vviksllknakepawfalnfhiltaeievenleklnklassykevlellesdkk 69 
                     ++i+ l + ++  ++++ln++ + ++i+++ + k nk+   + evl+  e +++
      KHJ31319.1 527 TAIAYLRSQNE--SKLSLNSKDVFDQITQKAKIKTNKTRIIFDEVLKSDELESR 578
                     55555555555..36888888888888888888888888888888777766655 PP

  == domain 2  score: 22.3 bits;  conditional E-value: 4.5e-08
  Glyco_transf_8   13 gasvviksllknakepawfalnfhiltaeievenleklnklassykevlellesdkksledfesklklrspkylsllnylRlylpelfpkldk 105 
                       + ++i s++kn+k+    +++f  +++ + +  +e +  la++y+  +e++  +   + +   ++++++ + + +  ++  +l+ l  +l+k
      KHJ31319.1 1202 MLNIMIVSVMKNTKH----SVKFWFIEQFLSSSFKEFIPYLAEEYNFSYEMVTYRWPHWLR---AQSEKQREIWGYKILFLDVLFPL--SLNK 1285
                      566789999999995....899998899999999999999999998887776666555543...46666666666666555555555..**** PP

  Glyco_transf_8  106 ilylDaDvvvqgdlseLwdldlkgkvlaa 134 
                      ++++D+D ++  dl eL++ldl+g   ++
      KHJ31319.1 1286 VIFVDSDQIIRADLIELINLDLNGAPYGF 1314
                      ***********************877665 PP

>> ActA  ActA Protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.3   5.3e-05     0.096     289     330 ..      21      62 ..      10      79 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 5.3e-05
        ActA 289 pssfefpppptdeelrlalpetpmllgfnapatsepssfefp 330
                  s f f  p  d elr a+p  p+ll +   a se ss  fp
  KHJ31319.1  21 DSLFSFASPTIDVELRTAFPAPPFLLELLETAGSENSSSYFP 62 
                 578999999999999999999999999999999999999988 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.5   0.00018      0.33      30      85 ..     526     581 ..     513     589 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00018
      AAA_14  30 kesilyinldderdkkladpekllelilek..lkeekktylflDEiqevpewekalks 85 
                 +  i y+  ++e++ +l+ + ++ + i +k  +k+ +kt +++DE+ +++e+e+ ++s
  KHJ31319.1 526 QTAIAYLRSQNESKLSLNSK-DVFDQITQKakIKT-NKTRIIFDEVLKSDELESRIQS 581
                 56789999999999887765.57777777645555.9999***********9998875 PP

>> TRIF-NTD  TRIF N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00013      0.24      59     130 ..    1352    1421 ..    1345    1441 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00013
    TRIF-NTD   59 vkLdalrddrvanylaeklkgtagaaengahlqleekdaevllsvAriyslLveeklCeaslrdkAykaAvk 130 
                  v L  +r+ +++ +l ++ ++  + a+ g+  +l ++ ++ +++v  iysl  e  +Ce    d+A k A +
  KHJ31319.1 1352 VDLRRFRQMAAGDRLRQQYHA-LS-ADPGSLSNLDQDLPNHMQKVLPIYSLPQEWLWCETWCSDEALKDAKT 1421
                  578899999***********9.33.456778888**********************************9954 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.88u 0.23s 00:00:01.11 Elapsed: 00:00:00.43
# Mc/sec: 10345.50
//
Query:       KHJ31320.1  [L=275]
Description: hypothetical protein EV44_g3860 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 2046.26
//
Query:       KHJ31321.1  [L=768]
Description: putative pre-mrna-splicing factor cwc22 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.4e-27   93.6   0.2      2e-26   92.2   0.0    1.8  2  MA3             MA3 domain
      1e-11   44.9   2.4    1.5e-11   44.4   1.3    1.9  2  MIF4G           MIF4G domain
     0.0084   15.8   8.9      0.017   14.8   8.9    1.4  1  DUF5523         Family of unknown function (DUF5523)
  ------ inclusion threshold ------
       0.59   10.0   2.7        1.4    8.8   2.7    1.6  1  DUF1980         Domain of unknown function (DUF1980)
        1.2    9.0   7.7        2.8    7.8   7.7    1.6  1  TLP-20          Nucleopolyhedrovirus telokin-like protein-20 
          2    8.1   5.9        6.7    6.4   5.9    1.9  1  FAM176          FAM176 family
        4.1    7.9  14.2        2.2    8.7  10.6    2.3  2  CENP-B_dimeris  Centromere protein B dimerisation domain
        4.5    5.3  16.7        7.3    4.6  16.7    1.3  1  DNA_pol_phi     DNA polymerase phi


Domain annotation for each model (and alignments):
>> MA3  MA3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0         3   6.7e+03      48      64 ..      49      65 ..      44      71 .. 0.78
   2 !   92.2   0.0   8.9e-30     2e-26       1     112 [.     352     457 ..     352     458 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 3
                S.SS--HHHHHHHHHHH CS
         MA3 48 esktyneyygllleklc 64
                +sk+y++++++ l+k +
  KHJ31321.1 49 KSKEYQRMAWEALKKSI 65
                48999999999999877 PP

  == domain 2  score: 92.2 bits;  conditional E-value: 8.9e-30
                 HHHHHHHHHHSSS...SHHHHHHHHHHTT--.TTHHHHHHHHHHHHHHS.SS--HHHHHHHHHHHCC-HHHHHHHHHHHHHHHHGGGGS-HH...HHHH CS
         MA3   1 lrrkifliieeylssgdyeeavsklekLklp.kqeheivkillecaleesktyneyygllleklceknlilkkqfekgfwdvlesledleldipeairn 98 
                 lr+ i+l+i+++    d ee+++kl k +lp  +e+e++++++ec+ +e kty+++ygl+ e++ + n+++ + fe++f +++++++++e++   ++rn
  KHJ31321.1 352 LRKTIYLTIMSSI---DPEECCHKLIKVQLPdGMEPELPSMIIECCSQE-KTYSKFYGLVGEQFAKINRLWNQLFEESFAKYYDTIHRYETN---KLRN 443
                 699**********...*********************************.******************************************...**** PP

                 HHHHHHHHHHTTSS CS
         MA3  99 laefvarlisediL 112
                 +a+f+++l+s+d +
  KHJ31321.1 444 IARFFGHLLSSDSI 457
                 **********9976 PP

>> MIF4G  MIF4G domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.4   1.3   6.7e-15   1.5e-11       2     212 .]      63     245 ..      62     245 .. 0.96
   2 ?   -2.9   0.0       1.9   4.3e+03      12      48 ..     453     489 ..     438     493 .. 0.65

  Alignments for each domain:
  == domain 1  score: 44.4 bits;  conditional E-value: 6.7e-15
                 HHHHHHHHCHTTTTHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC-S-HHHHHHHHHH CS
       MIF4G   2 kkvkgilnklskenfevlikqllklamdddknelkevielifekaveepsfsplyarlcgklnsrfqqnFrikllnklqeefekryeleneleenedgn 100
                 k ++g++nk+  +n+++++ +l + +       +  + ++i++ +  +  f p ya +++ +n++++ n+++ ll +l+  f+k           ++ +
  KHJ31321.1  63 KSINGLINKVNVSNIKHIVPELFNENLIR---GRGLFCRSIMKAQAASLPFTPIYAAMAAIVNTKLP-NVGELLLKRLIMHFKK---------GFKRND 148
                 5689*********************9996...9**********************************.****************.........788888 PP

                 HHHHHHHHHHHHHHHHTTSSEHHHHHHHHHHHHHGGCCCCSCCHSCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHCSSSSHHHH CS
       MIF4G 101 rrrrlglvrflgelfklkmltskilldclkellssltketaddppqdleeieilltllttigktlennekakkeldqffkriqkiledatrqelssrir 199
                 +  +l+  +f+  l+++++  + +   +l  ll + t+          +++ei++ l + +g+ le  e         f+++++il +   + +++r++
  KHJ31321.1 149 KAVCLSATTFIAHLCNQQVANEVVAAQILLLLLHKPTD----------DSVEIAVGLTREVGQHLE--EMNQVIALAVFDQFRNILHE---ADIDKRVQ 232
                 8889999*******************************..........******************..*******************9...9******* PP

                 HHHHHHHHHHHTT CS
       MIF4G 200 fmlkdlielkknk 212
                 +m++ l++++k+k
  KHJ31321.1 233 YMIEVLFQIRKDK 245
                 **********987 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.9
                 TTTTHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHH CS
       MIF4G  12 skenfevlikqllklamdddknelkevielifekave 48 
                 s++++  ++ +++ l+ +++ +++  +i+++fe  ve
  KHJ31321.1 453 SSDSIGWHVLSIVHLNEEETTASSRIFIKILFEDLVE 489
                 4555555556666666666667777777777777666 PP

>> DUF5523  Family of unknown function (DUF5523)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   8.9   7.6e-06     0.017      59     151 ..     278     365 ..     226     370 .. 0.60

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 7.6e-06
     DUF5523  59 eeaynfftfnfdpepeeseekkkkkekeekeeeeeegeeeeeeeeeeeeeeeekdeeellvkkeeeeflldqtaedllevkkAeyesykerlk 151
                  e  n+f+f+ d e +e++ +++k e   + ++ee++e+++  +++  +eeee+d+++  ++ke+   + dq++ dl++++k  y  + + ++
  KHJ31321.1 278 SEGLNIFKFDPDWEDNEEQYNRTKAEIFGEVSDEEDDEQDD--DSDA-SEEEEEDDDD--KQKEKAMEIKDQSNADLIALRKTIYLTIMSSID 365
                 46678888888887555444433333333333333333332..2222.2233333333..45677777889***********99988877766 PP

>> DUF1980  Domain of unknown function (DUF1980)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.7   0.00062       1.4     115     171 ..     307     365 ..     265     367 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00062
     DUF1980 115 qkedegtqeqslkpdtssyvtkdgydkemkkeakk..lskkkkItvtdenYlevmeeiy 171
                 + +de+ +eq  ++d+s+  ++d+ dk+++k+++    s+++ I + +  Yl +m++i+
  KHJ31321.1 307 EVSDEEDDEQDDDSDASEEEEEDDDDKQKEKAMEIkdQSNADLIALRKTIYLTIMSSID 365
                 3455566666666665555555555555555444433889999*************996 PP

>> TLP-20  Nucleopolyhedrovirus telokin-like protein-20 (TLP20)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   7.7    0.0012       2.8      76     161 ..     258     344 ..     255     348 .. 0.65

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0012
      TLP-20  76 lvensnklnviLfnikptvlkkgsviFkivytnkksansklflsapv..eksssededdeddededeaakiesnsdseesepssaKkq 161
                 lve++++++ +  + +++++  g +iFk   + +++ ++  + +a +  e s++ed +++dd+d +e+++ +++ d+++++++ +K q
  KHJ31321.1 258 LVEEEDQITHVVSLDDNIDVSEGLNIFKFDPDWEDNEEQYNRTKAEIfgEVSDEEDDEQDDDSDASEEEEEDDD-DKQKEKAMEIKDQ 344
                 6778899999999999999*********9877655555544444444226555555555555344444444444.7777777777776 PP

>> FAM176  FAM176 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   5.9     0.003       6.7      69     101 ..     309     341 ..     284     373 .. 0.52

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.003
      FAM176  69 sededeeeeeeeedsseseaeeelsefertlsv 101
                 s++ed+e++++++ s+e+e++++ ++ e+++++
  KHJ31321.1 309 SDEEDDEQDDDSDASEEEEEDDDDKQKEKAMEI 341
                 344444444444444444444444444433333 PP

>> CENP-B_dimeris  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       1.2   2.7e+03      49      73 ..     211     235 ..     206     244 .. 0.86
   2 ?    8.7  10.6   0.00098       2.2       9      39 ..     306     336 ..     301     371 .. 0.66

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.2
  CENP-B_dimeris  49 amayfamvkryltsfpiddrvqshi 73 
                     a+a f   +  l    id rvq  i
      KHJ31321.1 211 ALAVFDQFRNILHEADIDKRVQYMI 235
                     78899999999999********877 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00098
  CENP-B_dimeris   9 gedsesesdeeeeeeeedeededeeddeddd 39 
                     ge s+ e de++++ +  ee+e+++dd++++
      KHJ31321.1 306 GEVSDEEDDEQDDDSDASEEEEEDDDDKQKE 336
                     6777777777777766655555555554433 PP

>> DNA_pol_phi  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6  16.7    0.0033       7.3     645     688 ..     297     340 ..     263     360 .. 0.52

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0033
  DNA_pol_phi 645 eeddeeeeeeddeededseedddeeesdedeededdedvdeide 688
                      + e   + +++ed+e+ddd++ s+e+eed+dd++ +++ e
   KHJ31321.1 297 YNRTKAEIFGEVSDEEDDEQDDDSDASEEEEEDDDDKQKEKAME 340
                  22222222224445555555555555555555555555544332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (768 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1678  (0.0935914); expected 358.6 (0.02)
Passed bias filter:                      591  (0.0329634); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.86u 0.31s 00:00:01.17 Elapsed: 00:00:00.44
# Mc/sec: 5230.23
//
Query:       KHJ31322.1  [L=718]
Description: putative n-acetylglucosaminyl transferase component gpi1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-77  259.4   9.4    2.1e-77  259.4   9.4    2.0  2  Gpi1      N-acetylglucosaminyl transferase component (Gpi1)


Domain annotation for each model (and alignments):
>> Gpi1  N-acetylglucosaminyl transferase component (Gpi1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.2     0.068   1.2e+03      71     100 ..     240     270 ..     190     282 .. 0.64
   2 !  259.4   9.4   1.2e-81   2.1e-77       1     187 []     341     527 ..     341     527 .. 1.00

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.068
        Gpi1  71 lflwvikl.wksllesllsllelllkllall 100
                 +  +vik+ wk +++++ +++++++ ++ ++
  KHJ31322.1 240 MRDYVIKAtWKLIINYIYPMIKKFFIIVLIC 270
                 4444554438888899998888888766655 PP

  == domain 2  score: 259.4 bits;  conditional E-value: 1.2e-81
        Gpi1   1 fnslwlilnDvllGilllslllenaeviaelieklleellvdslekllewlsgnPaGlKLNkeLasflgklflwviklwksllesllsllelllkllal 99 
                 +nslwl++nDv++Gi+l+s++++n+++++e ++++l+ + +  l+++++wl+++PaGlKLN+eLa flg+lflwvi++w++++  l+++l+++++++++
  KHJ31322.1 341 YNSLWLVANDVIIGIALGSYIIDNSTWVTENLSETLSMYSIAALQNTISWLMDWPAGLKLNNELAAFLGDLFLWVIDYWSNFFGALKPILPKIIWFVGF 439
                 7************************************************************************************************** PP

        Gpi1 100 lsllGltfalsllsDllslltlhiylfyvlsariyrlqlevlksLfqlfrGkkyNvLrnrvDsldyeldqlllGtllFtvlvfLlPTv 187
                 +s++G+++ +sl+sD++s+lt+hiy+fy++sariy++q+++l+sLfqlfrGkk+NvLr+r+Ds+dy+ldqlllGt+lFt+l+fLlPTv
  KHJ31322.1 440 SSFAGASLPISLFSDFISVLTFHIYCFYMASARIYNWQYSILQSLFQLFRGKKHNVLRKRIDSCDYDLDQLLLGTILFTLLFFLLPTV 527
                 ***************************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (718 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       622  (0.0346924); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 5239.62
//
Query:       KHJ31323.1  [L=234]
Description: hypothetical protein EV44_g5616 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.016   16.0   2.4      0.036   15.0   0.8    2.0  2  DUF1764   Eukaryotic protein of unknown function (DUF1764)
       0.11   12.4   0.2       0.47   10.4   0.0    2.0  2  Ferlin_C  Ferlin C-terminus


Domain annotation for each model (and alignments):
>> DUF1764  Eukaryotic protein of unknown function (DUF1764)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.15   1.4e+03      36      43 ..      63      70 ..      48     108 .. 0.59
   2 ?   15.0   0.8     4e-06     0.036      20      75 ..     133     190 ..     114     206 .. 0.67

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.15
     DUF1764 36 kkkkskkk 43
                k+k++kk+
  KHJ31323.1 63 KNKSTKKS 70
                11111111 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 4e-06
     DUF1764  20 kkkkekekeeeee...ekekkkkskkkkkkkkkkeeekkfedseskkrrktedGlpvYt 75 
                 +++k+k++ ++++   +++ +++s kk k+++++ +e+++ed++  + r+t +G+++Y 
  KHJ31323.1 133 QQEKRKRTRDARSlgsSSSDVESSCKKPKNQDSSGSEEELEDKK-MEIRTTYEGFTIYG 190
                 22222222222224436666777777777777777777777777.99***********5 PP

>> Ferlin_C  Ferlin C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   5.3e-05      0.47       9      43 ..      42      74 ..      35     119 .. 0.79
   2 ?   -0.1   0.1     0.087   7.8e+02      34      53 ..     155     174 ..     124     219 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 5.3e-05
    Ferlin_C  9 krlkGWWPliklkeqediereereakkkkKkkkkr 43
                + +k  +Pli+ k  e+ er ++++ kk   + k+
  KHJ31323.1 42 RVMKSVFPLITPKLREEYERSKNKSTKK--SRIKD 74
                789999***********99998554444..44444 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.087
    Ferlin_C  34 kkkkKkkkkrsekkpedlef 53 
                 ++ kK k+++s+ ++e+le 
  KHJ31323.1 155 SSCKKPKNQDSSGSEEELED 174
                 45566666666666666653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       849  (0.0473534); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 1745.15
//
Query:       KHJ31324.1  [L=170]
Description: putative transcription factor far1-related [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00017   22.3   2.1    0.00025   21.7   2.1    1.3  1  FAR1      FAR1 DNA-binding domain
  ------ inclusion threshold ------
      0.041   14.3   0.3      0.057   13.8   0.3    1.3  1  AFT       Transcription factor AFT


Domain annotation for each model (and alignments):
>> FAR1  FAR1 DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   2.1   2.8e-08   0.00025       6      87 ..      24      98 ..      21     101 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 2.8e-08
        FAR1  6 YakrvGFsvrvkksrrsrkdgeiirrkfvCskeGfkkekkktkeakrerastrtgCkAmlvvkkek.egkwvvtklvkeHNHe 87
                +a++ G+  +++  + +       r  + C++ G ++++ +     r+++s r+gC   +++++ k e+k +v++  ++HNHe
  KHJ31324.1 24 FARSHGYHLSRAPGSDK----GKGRIYLQCHRAGEHETRGTV----RNSQSNRIGCPFRIRIRYFKnENKTRVIHEYTQHNHE 98
                56666665554443333....33456789*****99998888....9999*************966599*************8 PP

>> AFT  Transcription factor AFT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.3   6.4e-06     0.057      68     110 ..      56      98 ..      18      99 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 6.4e-06
                 ....XXXXXXXXXX----EEEEEEETTTTEEEEEEEE---SS- CS
         AFT  68 skkkkkkravsrynsCPfrvratyslkrkkWsivvvnnehshe 110
                 +++   ++++s++  CPfr+r  y  +++k +++    +h+he
  KHJ31324.1  56 ETRGTVRNSQSNRIGCPFRIRIRYFKNENKTRVIHEYTQHNHE 98 
                 333445567788899*********9888888887777888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1338.95
//
Query:       KHJ31325.1  [L=271]
Description: putative gpi-anchor biosynthesis protein (pig-f) [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-61  207.2   4.2    2.8e-61  206.8   4.2    1.2  1  PIG-F     GPI biosynthesis protein family Pig-F


Domain annotation for each model (and alignments):
>> PIG-F  GPI biosynthesis protein family Pig-F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.8   4.2   1.6e-65   2.8e-61       2     179 ..      43     259 ..      42     260 .. 0.88

  Alignments for each domain:
  == domain 1  score: 206.8 bits;  conditional E-value: 1.6e-65
       PIG-F   2 lpalllallalrfsalvadpvstLlsslivlallqvlyvvlcl.........................ekkkk..............kskkskivlall 61 
                 +p+lll+++++rf++lv+dpv +L + li+l+l+q++yvv+cl                         +   +              ++ ++ +++++ 
  KHJ31325.1  43 HPFLLLSVYIARFYHLVSDPVGELKNFLIPLILIQITYVVVCLpiagfsasssanlskvgargkakskK---AmkspsrilvrfylaSNLQNYFFTSIQ 138
                 9****************************************************9999999888765430...145667777777776444555555555 PP

       PIG-F  62 sllltll...latlllaillvlfGApllthlleTlllalhlslltvlpllyvlgvdaeawkevvsleepldevlggllgtvvGaWlGavPiPLDWdrpW 157
                 ++l++l+    + ++lai+ vlfGAp+++hll+T+l + hlsll+++pl+yv+g+d+ +wk+++s+  p+dev+g+++g+++G WlGa+PiPLDWdr+W
  KHJ31325.1 139 TILFALCltgTSIPVLAIIQVLFGAPFTSHLLHTILSSTHLSLLSLFPLIYVHGTDSGKWKQILSAYCPMDEVFGATVGAFIGGWLGAIPIPLDWDREW 237
                 4444443444599************************************************************************************** PP

       PIG-F 158 QkwPitilvGaylGyvvgslig 179
                 QkwPiti++G+ylGy+ g+++g
  KHJ31325.1 238 QKWPITIVTGMYLGYISGKFAG 259
                 ******************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 2177.68
//
Query:       KHJ31326.1  [L=163]
Description: hypothetical protein EV44_g2438 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       975  (0.0543812); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.20s 00:00:00.58 Elapsed: 00:00:00.35
# Mc/sec: 1411.10
//
Query:       KHJ31327.1  [L=376]
Description: hypothetical protein EV44_g1288 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-22   79.4   0.0    5.1e-22   78.4   0.0    1.6  1  HhH-GPD   HhH-GPD superfamily base excision DNA repair protei
    1.4e-07   31.0   0.0    4.5e-07   29.4   0.0    1.9  1  HHH       Helix-hairpin-helix motif


Domain annotation for each model (and alignments):
>> HhH-GPD  HhH-GPD superfamily base excision DNA repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.4   0.0   5.7e-26   5.1e-22       1     107 [.     163     308 ..     163     309 .. 0.97

  Alignments for each domain:
  == domain 1  score: 78.4 bits;  conditional E-value: 5.7e-26
                 HHHHHHTTS-HHHHHHHHHHHHHHHS........HCSHHHHHHSHHHHHHHHHTTSTTHHHHHHHHHHHHHHHH......................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......................... RF
     HhH-GPD   1 vsailsqqtsderanriierlferfg........fptpedladadeekLrelirelGfyrrKakyikelArilv......................... 66 
                 +s +ls+qt+d   ++ ++rl+ +          ++t+e l+++d ++L+elir++Gf+++K kyik++A+il                          
  KHJ31327.1 163 ISLMLSSQTKDTINAATMNRLYLELPphsdgampGLTLENLLAVDAAHLNELIRAVGFHNNKTKYIKATAEILRdkwnsdipdsidglvslpgvgpkma 261
                 789********************999************************************************************************* PP

                 ........S-SSS--TTSHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHH CS
                 ........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     HhH-GPD  67 ........gkpdvlivvDvhvrrilkrlrsikekktkkkvekkleelle 107
                         g+++ +i vDvhv+ri + ++++k+ kt+++++ +l+ +l+
  KHJ31327.1 262 ylclssawGRTE-GIGVDVHVHRITNLWGWHKT-KTPEETRLALQAWLP 308
                 ********9987.********************.6********988876 PP

>> HHH  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   5.1e-11   4.5e-07       4      29 ..     241     266 ..     240     267 .. 0.93

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 5.1e-11
                 HHHTSSHHHHHTSTT-SHHHHHHHHH CS
         HHH   4 glipasreeLlalPGVGpktAeaIls 29 
                 ++ip+s++ L++lPGVGpk+A   ls
  KHJ31327.1 241 SDIPDSIDGLVSLPGVGPKMAYLCLS 266
                 79*******************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1016  (0.056668); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2724.45
//
Query:       KHJ31328.1  [L=237]
Description: putative recombination hotspot-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-48  165.9   0.0    1.5e-48  165.6   0.0    1.0  1  Translin  Translin family


Domain annotation for each model (and alignments):
>> Translin  Translin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.6   0.0   8.1e-53   1.5e-48       2     205 .]      26     233 ..      26     233 .. 0.91

  Alignments for each domain:
  == domain 1  score: 165.6 bits;  conditional E-value: 8.1e-53
                 HHHHHHHHHHHHHHHHHHHHHHHHTTGSST.TTHHHHHHH.HHHHHHHHHHHTTSS..........GHHHHGGGTH.HHHHHHHHHHHHHHHH...... CS
    Translin   2 rreriikasrditaaskkiifllhrvrsek.teaqdkkakikkeakeklkeiakllasvaeelqgsnayrYqrqisgglqeliealsfahYle...... 93 
                 +re+i ++ + ++++ + ++ +l+r++s++ ++ ++   + ++ +k+++k++ +l+    +  ++s++y+ ++ +s+ +q +i+++ ++ +l+      
  KHJ31328.1  26 EREQIKEITQTLERQGRITLSMLSRAHSTPeAQLTPIILEAENLIKDEIKTVGELA----NLASKSPYYKHNSIWSRDVQTVIFSIIYCGWLGgmgmks 120
                 59**************************9966655555554566666666666666....334567********************************* PP

                 ....HSS---HHHHHHHTT.---S..SSSSS---HHHHHHHHHHHHHHHHHHHHHHHCTT--S.HHHHHHHHHHHHHHHHHTS----HH...HHHHHTT CS
    Translin  94 ....tqtLitleevqkilealken..eedafhltpedYllGlfdLtgELmRfainsvalgdkeekplqilkflrelragfellnlkndsakdlrkKldv 186
                     +++L++++e+++il+ +++n  ++dafh+t+e+Yl +l+ L++EL R+a+nsv+lgd++ +plqi+kf+++l+agf++lnlknd    lr++ d+
  KHJ31328.1 121 sppsQGKLLSIDECGDILN-VPVNlqDRDAFHITIEEYLQSLITLIEELARLAVNSVTLGDYR-RPLQISKFVKDLHAGFQILNLKNDL---LRRRSDS 214
                 ******************9.888889*************************************.***********************98...******* PP

                 HHHHHHHHHHHHHHHHHHT CS
    Translin 187 lkqsvkKvEdvvYdlsvRg 205
                 +k++vkKvEd+vYdls+R+
  KHJ31328.1 215 IKYNVKKVEDIVYDLSLRN 233
                 *****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       722  (0.04027); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 1802.75
//
Query:       KHJ31329.1  [L=128]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       773  (0.0431145); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 951.51
//
Query:       KHJ31330.1  [L=207]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1554.54
//
Query:       KHJ31331.1  [L=306]
Description: putative uroporphyrinogen-iii synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-31  110.0   0.0    1.5e-31  109.5   0.0    1.1  1  HEM4      Uroporphyrinogen-III synthase HemD


Domain annotation for each model (and alignments):
>> HEM4  Uroporphyrinogen-III synthase HemD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.5   0.0   8.5e-36   1.5e-31      12     230 ..      33     294 ..      26     296 .. 0.85

  Alignments for each domain:
  == domain 1  score: 109.5 bits;  conditional E-value: 8.5e-36
                 EEEEE---EECCE..........CCHHHHHHHHH.T.....--SEEEE--HHHHHHHHHHHH.......HTT---HHHHHCSEEESSHHHHHHHHHTT- CS
        HEM4  12 aeplelPlieiep..........aedraelraal.ddleagkydwliftSanavealfealk.......reeedvkalaslkvaavGpaTaraLeelgl 92 
                 ++p+++P+ie+++          +  r+     + ++++ +ky +liftS++avea++ ++           +d   l+++++++vGpaT+raL+++ l
  KHJ31331.1  33 FDPCFVPVIEHKFkevelnffrrILHRR----RIgKEIN-SKYGGLIFTSQRAVEAFALLVLegvengsGDYRDWPYLQDVPIYSVGPATTRALKAIPL 126
                 689**********866653322222222....2234444.89**************8887779**99988889999999*****************877 PP

                 --SE..E-..SSSHHHHGGGS-.---E.EE.......EEE-SS.S--HHHHHHHH.....HTTEEEEEE-SEEEEE-HHHHHHHHHHHHT...T--SEE CS
        HEM4  93 rvdl..vpseegtaegLaeelaeslag.kr.......vlllrgeiarddlaegLe.....ergaevdevevYetvpaeeepeelkealka...gevdav 173
                 ++ l   +se+g++e+La+++ ++ ++  r       ++++ ge ++d++  +L       + + v+e++vY  ++  +++ ++ + l++   +++ +v
  KHJ31331.1 127 DHPLniRGSESGNGEALASFILSDYSDwYRdwdfkcpLIFVGGERRNDIITTKLMnpdlgTNCIPVVELDVYSISVLPNFKNDFIKSLNSkmaSDIIWV 225
                 7766889999*************9998877899999788888999999999999867665666***********9999999999999988565677*** PP

                 EESSHHHHHHHHHH-S-HH...........HHHCTSEEEEESHHHHHHHH.HTT---SEEETS--HHHH CS
        HEM4 174 vftSpstvrnllellkdeg...........delkevkvaaiGptTaealk.klglkvdvvaeeptaegl 230
                 +++Sps  ++++  l               + ++++ +aaiGptT+++l+ k+g+ vdv+a +ptae+l
  KHJ31331.1 226 AIFSPSVGEAMIDSLDLVDhrtgrakakpsHANRKIFFAAIGPTTRDFLQeKFGFVVDVCAAKPTAESL 294
                 ************9998555778899*****99*****************99****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       316  (0.0176251); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2319.79
//
Query:       KHJ31332.1  [L=609]
Description: hypothetical protein EV44_g0219 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (609 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       465  (0.0259356); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 4462.18
//
Query:       KHJ31333.1  [L=101]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.058   13.8   0.5      0.058   13.8   0.5    1.8  2  eIF3g     Eukaryotic translation initiation factor 3 subunit 


Domain annotation for each model (and alignments):
>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.5   3.2e-06     0.058      99     119 ..      59      79 ..      10      83 .. 0.86
   2 ?   -0.8   0.5       0.1   1.9e+03     105     119 ..      83      98 ..      80     100 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 3.2e-06
       eIF3g  99 kkekklvkCriCkgdHfTskC 119
                 k++++++kC+ C g HfT  C
  KHJ31333.1  59 KHRQNILKCKRCLGFHFTRGC 79 
                 347899*************99 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.1
       eIF3g 105 vkCriCk.gdHfTskC 119
                 + C +C      T+kC
  KHJ31333.1  83 LACANCAsTMYLTFKC 98 
                 78****6477889999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 783.82
//
Query:       KHJ31334.1  [L=274]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      273  (0.0152267); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1968.01
//
Query:       KHJ31335.1  [L=99]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.012   15.4   1.4      0.019   14.8   1.4    1.4  1  zf-CCHC_6  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   1.4   1.1e-06     0.019       3      19 ..       5      20 ..       3      35 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.1e-06
   zf-CCHC_6  3 KCknCGAFGHtarSkrC 19
                KC+nCG   H+a S+rC
  KHJ31335.1  5 KCRNCGGA-HRADSRRC 20
                9*****95.******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       867  (0.0483574); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 755.74
//
Query:       KHJ31336.1  [L=1014]
Description: putative guanine nucleotide exchange factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-31  109.1   0.0    4.6e-31  107.9   0.0    1.6  1  Sec7             Sec7 domain
    2.8e-06   27.8   1.5    1.2e-05   25.7   0.6    2.7  2  PH               PH domain
    9.7e-06   26.0   0.1    3.2e-05   24.3   0.1    1.9  1  PH_9             Pleckstrin homology domain
  ------ inclusion threshold ------
       0.15   12.2   5.9       0.41   10.7   5.9    1.7  1  DHR10            Designed helical repeat protein 10 domain
       0.84    9.5   4.0       0.71    9.8   0.6    2.3  2  NleF_casp_inhib  NleF caspase inhibitor


Domain annotation for each model (and alignments):
>> Sec7  Sec7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.9   0.0   1.3e-34   4.6e-31      42     182 ..     463     600 ..     431     601 .. 0.91

  Alignments for each domain:
  == domain 1  score: 107.9 bits;  conditional E-value: 1.3e-34
                 HTCCS-HHHHHHHHCSGG.HHHHHHHHHHHCTS--TT--HHHHHHHHCCCS-B-SSHHHHHHHHHHHHHHHHHTTCTCG-SHHHHHHHHHHHHHHHHHH CS
        Sec7  42 etpgldkkklGeylgkek.efnkevlkefvdlfdfsglrldeAlRlflssfrlpgEaqkierilekFaekyfeqnpevfenadavfvLaysiimLntdl 139
                  ++ +++  + + l+k + +f++ vl+++++ f f g ++d+A+R++l +++lp+E q+i+r l+ Fa++y+e np ++++ d+++ +a+s+++L+td 
  KHJ31336.1 463 LEEAISRGVVASVLSKGSdSFSQAVLRSYMRGFGFFGDPIDMAIRKLLMEVELPKETQQIDRCLQGFANRYHECNPGIYDSPDQAYFVAFSLLILHTDV 561
                 447788889999999877689****************************************************************************** PP

                 C-TTSCCS--HHHHHHCTTTTBTTB---HHHHHHHHHHHHHS- CS
        Sec7 140 hnpqvkkkmtledFiknnrgindgkdlpeefLeeiYdsIkeee 182
                  n++ k+km+++d++kn+r    g+ + +e+Le  Yd+I  ++
  KHJ31336.1 562 FNKNNKHKMQKSDYLKNTR----GEGIYDEILECFYDNISYTP 600
                 ******************9....567999**********8765 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       2.4   8.6e+03      78      93 ..     619     634 ..     596     645 .. 0.72
   2 !   25.7   0.6   3.4e-09   1.2e-05       5     103 ..     730     852 ..     726     854 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2.4
                 SSTEEEEEEESSHHHH CS
          PH  78 ngsrtyllqasseeer 93 
                 ++++++++ ++s++++
  KHJ31336.1 619 KEKKKFIFNTNSDSSK 634
                 2246777777777665 PP

  == domain 2  score: 25.7 bits;  conditional E-value: 3.4e-09
                 EEEEEETSSSSC...SEEEEEEEEETTEEEEESST..........................TCTTESSEEEEEESTTEEEEEEECTT.SSSSTSEEEEE CS
          PH   5 GwLlkkgsgkkk...swkkrwfvLkdsellyyknd..........................ksekdkepkgsislsncevvevvate.dpkrkfcfelr 73 
                 G+L++k+ +kkk    w++  ++L++ +l+++kn                           +   +++p   +s ++ +      ++ ++k+k+ f+++
  KHJ31336.1 730 GILWRKDLKKKKtrsPWQEWGAILTGAQLYFFKNTnwikslmsqldthirqgndgipvifkPPLDQFKPDALMSTDDSVALM---DSlYKKHKNAFVFV 825
                 7778777666667889*******************99999999999999999999988877666677777777777777665...45599999999997 PP

                 ESTSSSTEEEEEEESSHHHHHHHHHHHHHH CS
          PH  74 iverngsrtyllqasseeerkeWikaiqsa 103
                  +   g  + ++ a++eee+++W++ ++ a
  KHJ31336.1 826 RH--AG-FEETFLAENEEEMNDWLAKLNYA 852
                 77..77.999*****************987 PP

>> PH_9  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.1   8.9e-09   3.2e-05      11     119 .]     732     854 ..     724     854 .. 0.82

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 8.9e-09
        PH_9  11 lleskgkktplkkrgWkevyavlkklvLylykdee......esesaetedlks................lknakllgkirlhhaLaekasdYkkkshvF 87 
                 l+ ++ kk+   +  W+e  a+l + +Ly++k+ +      +       +l++                l + k+ + ++   + a   s Ykk ++ F
  KHJ31336.1 732 LWRKDLKKK-KTRSPWQEWGAILTGAQLYFFKNTNwikslmS-------QLDThirqgndgipvifkppLDQFKPDALMSTDDSVALMDSLYKKHKNAF 822
                 455555555.35667*****************9665533332.......3333345566799999999999999999********************** PP

        PH_9  88 rLqtadgaeylfqtsdakevqeWvdtiNyvAA 119
                       g e  f +++++e++ W  ++Ny+AA
  KHJ31336.1 823 VFVRHAGFEETFLAENEEEMNDWLAKLNYAAA 854
                 *******************************8 PP

>> DHR10  Designed helical repeat protein 10 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   5.9   0.00011      0.41      39     108 ..     880     948 ..     872     950 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00011
       DHR10  39 iklleeieaelakleeakkklkelrdaleekeielrelerkeerlqrqlenaeeklerlreqaeekreaa 108
                 i++leei++  ++ +++ ++++e ++++e k + +  l++++e + ++++  eekl+ ++++ + + ++a
  KHJ31336.1 880 IRQLEEIKESYQSAQTSTDEVSEVNEEIEAKMA-QDILSARREIMLQKIADGEEKLAAAQKHLDIHLRNA 948
                 89***************************9988.999************************988776665 PP

>> NleF_casp_inhib  NleF caspase inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.2      0.27   9.6e+02      62      91 ..     146     175 ..     134     187 .. 0.84
   2 ?    9.8   0.6    0.0002      0.71      19      84 ..     882     947 ..     879     971 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.27
  NleF_casp_inhib  62 edykleggqkveLkegitaedRdnylkdlv 91 
                       ++kl +  +++L +  ++  R++ +k+l 
       KHJ31336.1 146 REKKLRRRSQTTLGKLLEQSPRNHKVKKLA 175
                      6899***********************995 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.0002
  NleF_casp_inhib  19 klklifereiastTaeekikElsdklt.klknsvlseredlYevedykleggqkv.eLkegitaedRd 84 
                      +l++i e + +  T+  ++ E+ ++++ k+ +++ls r ++   +++  +g +k    +++ + + R+
       KHJ31336.1 882 QLEEIKESYQSAQTSTDEVSEVNEEIEaKMAQDILSARREIM--LQKIADGEEKLaAAQKHLDIHLRN 947
                      79999*********************857*********9984..333334433331345555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1014 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1054  (0.0587874); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.75u 0.26s 00:00:01.01 Elapsed: 00:00:00.42
# Mc/sec: 7246.73
//
Query:       KHJ31337.1  [L=213]
Description: hypothetical protein EV44_g3453 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.46   10.2   1.9       0.64    9.7   1.9    1.2  1  Tetraspanin  Tetraspanin family


Domain annotation for each model (and alignments):
>> Tetraspanin  Tetraspanin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.9   3.6e-05      0.64     156     203 ..      55     108 ..      25     110 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 3.6e-05
                  GSSTT-SSSCGCC........................S--HHHHHHHHC--XXX CS
                  xxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Tetraspanin 156 dnpsrencsvPes......CclptpnqayleasksiytegCidklvnwiksnlk 203
                  ++ sr n+  P s      C+  ++++++  +++++ +e+C+ k+ n+iks l+
   KHJ31337.1  55 NQGSRSNRYSPVSnnlkprCNVCQKENCRSWNHTEQEKETCKTKFRNMIKSRLN 108
                  5677888888888888888888888877777777777*************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       910  (0.0507558); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1603.49
//
Query:       KHJ31338.1  [L=186]
Description: hypothetical protein EV44_g4069 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       874  (0.0487478); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1397.21
//
Query:       KHJ31339.1  [L=666]
Description: hypothetical protein EV44_g3345 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-07   31.5   0.4    3.3e-07   30.0   0.4    1.9  1  gag_pre-integrs  GAG-pre-integrase domain
  ------ inclusion threshold ------
      0.019   14.6   0.1      0.019   14.6   0.1    1.9  2  Retrotran_gag_2  gag-polypeptide of LTR copia-type
      0.089   13.0   0.0       0.29   11.4   0.0    1.8  2  PK_C             Pyruvate kinase, alpha/beta domain


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.4   5.6e-11   3.3e-07      24      67 .]     613     658 ..     572     658 .. 0.81

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 5.6e-11
  gag_pre-integrs  24 inlWHrRLGHpsfsrlkkLfkkgllpglkisk..sevCeaCqlgKq 67 
                      + lWHrRL+Hps +rlk  + + +   l+ s+  s  CeaC +gK+
       KHJ31339.1 613 LILWHRRLCHPSADRLKWTIMHTVGIDLDVSDvkSLPCEACDMGKS 658
                      68****************9998886666664433889*******96 PP

>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.1   3.2e-06     0.019       7     113 ..     172     278 ..     169     290 .. 0.79
   2 ?   -2.3   0.2      0.55   3.3e+03      61     123 ..     344     408 ..     343     414 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 3.2e-06
  Retrotran_gag_2   7 kalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsalgvkiddedkvvllL.. 98 
                      k  ++I+ + +++  +l+++ k+  ++ + +++++++ s+ ++ +++++l slk++ +  + ++++k+++++ + +++g  ++    +  +   
       KHJ31339.1 172 KLAGAIRRTTTSDARTLIRGMKQGTKIMKLFEATFQQVSELQQDNYWEELSSLKYRGDCPI-TYVTKFKTAIHNYKSVGGLVPSVQ-AKNMFka 263
                      667789999999999****************************************988665.7*************9998665433.3333211 PP

  Retrotran_gag_2  99 asLPesyetfvtaie 113
                      +sL + y++fv +++
       KHJ31339.1 264 SSLEQLYQDFVAHLY 278
                      455555666666655 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.55
  Retrotran_gag_2  61 mkegesvadhinkleelvneLsalgvkiddedkvvllLasLPes.yetfvtaies.seedltlee 123
                      +++++ ++d  n +++ ++ L++    ++++d ++l  a++++s +e+ v+ +e+  e++++l +
       KHJ31339.1 344 LAKDKEIKDRSNYVDSSISLLKNKHPVVTESDPAFLYTATVSPSvFEDTVNLYEEeLEKRQKLRS 408
                      67788888888888888888999888999999999999999888899999988886666666655 PP

>> PK_C  Pyruvate kinase, alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       2.6   1.5e+04      19      57 ..      13      29 ..      10      47 .. 0.55
   2 ?   11.4   0.0   4.9e-05      0.29      33      95 ..     224     287 ..     221     294 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 2.6
                EEEE-SSSHHHHHHHHT-TSSEEEEEESHHHHHHHHHHC CS
        PK_C 19 IvvltesGetArliskyrpkvpiiavtpneltarqlaly 57
                I++ ++s e A+ + +                      +
  KHJ31339.1 13 IIAQSSSNERALEMKR----------------------L 29
                5555555555544444......................3 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 4.9e-05
                 HHT-TSSEEEEEESHHHHHHHHHHCTTEEHHH.HHHHH......TTSHHHHHHHHHHHTTSS-STS CS
        PK_C  33 skyrpkvpiiavtpneltarqlalyrGvypvlvekakt...aestdellreavkvakeaglvkkgd 95 
                  kyr ++pi  vt+ + + +    ++G +p   + ak+   a+s+++l++++v+++  + + kkg 
  KHJ31339.1 224 LKYRGDCPITYVTKFKTAIHNYKSVGGLVPSV-Q-AKNmfkASSLEQLYQDFVAHLYHKTIEKKGN 287
                 69***************************995.4.4445778889999999999998887777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (666 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       902  (0.0503096); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4606.61
//
Query:       KHJ31340.1  [L=360]
Description: hypothetical protein EV44_g3991 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2604.62
//
Query:       KHJ31341.1  [L=282]
Description: putative 60s ribosomal protein l37 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.029   14.6   9.3      0.029   14.6   9.3    2.5  2  ATG16          Autophagy protein 16 (ATG16)
      0.061   13.5   0.8       0.19   11.9   0.1    2.2  2  DUF4809        Domain of unknown function (DUF4809)
      0.088   11.7   8.9       0.13   11.1   8.9    1.2  1  DUF2362        Uncharacterized conserved protein (DUF2362)
       0.25   10.4  16.5        2.3    7.2  16.5    2.1  1  Atg14          Vacuolar sorting 38 and autophagy-related subu
        0.4   11.2   9.9       0.27   11.7   1.1    3.2  4  NPV_P10        Nucleopolyhedrovirus P10 protein
       0.67   10.7  11.4        2.4    8.9   1.3    3.0  3  FliD_N         Flagellar hook-associated protein 2 N-terminus
        3.4    6.5   5.9        4.4    6.1   5.9    1.2  1  LMBR1          LMBR1-like membrane protein
        4.6    7.1   8.8        2.9    7.8   1.3    2.5  2  EMP24_GP25L    emp24/gp25L/p24 family/GOLD
        7.8    5.9  23.1        8.6    5.7   6.4    2.4  2  DUF3552        Domain of unknown function (DUF3552)
        8.2    6.8  24.6        4.1    7.8   2.8    4.5  4  Csm1_N         Csm1 N-terminal domain
        9.2    6.6  16.4       0.18   12.1   3.9    3.3  3  BLOC1_2        Biogenesis of lysosome-related organelles comp


Domain annotation for each model (and alignments):
>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   9.3   1.8e-05     0.029     109     178 ..     101     170 ..      96     174 .. 0.94
   2 ?   -0.4   9.3      0.68   1.1e+03     115     176 ..     189     249 ..     183     264 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.8e-05
       ATG16 109 eelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnqaEeklrkle 178
                 +e  +lee+l +++ +l++l++e+a+l  +l+++  el +k + +q +  El+aL  +l+++Ee  + l+
  KHJ31341.1 101 QENVELEESLAQKKLALKSLKTEVADLVVELEKKGRELYQKYHHIQLQTTELQALPSKLKSLEESIKSLK 170
                 67789***********************************************************999887 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.68
       ATG16 115 eeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqD.ElsaLqlqlnqaEeklrk 176
                  e ++ +e++ ael +++++l++++  r  + +e+e+l+ +l+  E  +L  +l+  E+k+rk
  KHJ31341.1 189 LELIELREKETAELDRQINHLQEAILPR--KTNELETLNTELHSlEAKSLSSTLSAEEAKKRK 249
                 5667778889999999999999987655..456888888888866889999999998888886 PP

>> DUF4809  Domain of unknown function (DUF4809)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       1.3   2.2e+03      34      53 ..     112     133 ..      99     160 .. 0.64
   2 ?   11.9   0.1   0.00012      0.19      88     126 ..     244     282 .]     187     282 .] 0.81

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.3
     DUF4809  34 gkeisleeL..tvasLvdslal 53 
                 +k+++l+ L  +va+Lv  l +
  KHJ31341.1 112 QKKLALKSLktEVADLVVELEK 133
                 4555555553246666666544 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00012
     DUF4809  88 vtfkskdqkiqvkkkledlqelfeevnqiLqqlFelepv 126
                    k+k++ i v++ le+++  ++ v+ +L+ +F +ep+
  KHJ31341.1 244 EAKKRKENSINVENDLEERARWWTGVEDMLKGIFSMEPM 282
                 4457899******************************96 PP

>> DUF2362  Uncharacterized conserved protein (DUF2362)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   8.9   8.2e-05      0.13      29     183 ..      98     251 ..      95     267 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.2e-05
     DUF2362  29 veketkklqdekaesllkklkkseldvdsiakelekavkeelleyaekeeptde.eifaqvyhklvhs.paletllqlehtyakavedlveernkelek 125
                 ve++++   +e+ +++  +lk+ +++v +++ elek+ +e  ++y + + +t e + ++   ++l +s ++l++l ++e +       l  +++ el +
  KHJ31341.1  98 VEHQENVELEESLAQKKLALKSLKTEVADLVVELEKKGRELYQKYHHIQLQTTElQALPSKLKSLEESiKSLKNLQNVETNP---NLLLPLDKTLELIE 193
                 566666667777777777899999999***********99888888766544332666666666666655555555555543...4445678999999* PP

     DUF2362 126 leekqteemekaiqeldksltdedvnelaakhfeeqqllkkklnseleelketQkkeY 183
                 l+ek+t e++++i++l++ + +++ nel++ + e ++l  k l+s+l++ + + +ke 
  KHJ31341.1 194 LREKETAELDRQINHLQEAILPRKTNELETLNTELHSLEAKSLSSTLSAEEAKKRKEN 251
                 **************************************************99999984 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2  16.5    0.0014       2.3      52     164 ..     100     243 ..      59     264 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0014
       Atg14  52 keeaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklk...................................... 112
                 ++e+ +le+ + +kk +l++lk+++adl  +l++    l+q    i+ +  +l++l +klk                                      
  KHJ31341.1 100 HQENVELEESLAQKKLALKSLKTEVADLVVELEKKGRELYQKYHHIQLQTTELQALPSKLKsleesikslknlqnvetnpnlllpldktlelielreke 198
                 3367889999999***********************************************999999999999999999999999997777777643333 PP

       Atg14 113 ..kRrsdleslqneleerrkkqiaklqdaikrieqklsslssktlesrsslcse 164
                   +       l  +++  +++++ + ++++ +    l+sl+ k+l+  s+l+ e
  KHJ31341.1 199 taE-------LDRQINHLQEAILPRKTNELETLNTELHSLEAKSLS--STLSAE 243
                 330.......333333333333333333333333333333333333..233323 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       3.8   6.2e+03      43      62 ..       4      16 ..       1      24 [. 0.52
   2 ?   -0.2   0.0      0.85   1.4e+03      36      60 ..     103     126 ..      97     127 .. 0.77
   3 ?   11.7   1.1   0.00017      0.27      15      73 ..     123     181 ..     115     183 .. 0.90
   4 ?    4.1   0.2     0.039        63      15      56 ..     201     233 ..     190     248 .. 0.57

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 3.8
     NPV_P10 43 kLdaqsaqLaeletkvenIq 62
                 Ld+  ++L+       +Iq
  KHJ31341.1  4 SLDDVIKSLE-------QIQ 16
                3333333333.......333 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.85
     NPV_P10  36 dvtelnekLdaqsaqLaeletkven 60 
                 +  el+e L +   +L++l+t+v +
  KHJ31341.1 103 N-VELEESLAQKKLALKSLKTEVAD 126
                 4.46999999999999999999975 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 0.00017
     NPV_P10  15 avddkVdalqqqvddvqenlpdvtelnekLdaqsaqLaeletkvenIqdiLnpdevPdl 73 
                 +v d V  l+++  ++ ++   ++  +++L+a++ +L++le+++++ +++ n ++ P+l
  KHJ31341.1 123 EVADLVVELEKKGRELYQKYHHIQLQTTELQALPSKLKSLEESIKSLKNLQNVETNPNL 181
                 677888999999999*********999*********************99998888876 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.039
     NPV_P10  15 avddkVdalqqqvddvqenlpdvtelnekLdaqsaqLaelet 56 
                 ++d +++ lq+++             +++L+ ++++L++le+
  KHJ31341.1 201 ELDRQINHLQEAI-------LP--RKTNELETLNTELHSLEA 233
                 4444444444444.......33..224445555555555544 PP

>> FliD_N  Flagellar hook-associated protein 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.1   1.8e+03      28      49 ..     108     129 ..     103     136 .. 0.78
   2 ?    8.9   1.3    0.0015       2.4      14      59 ..     130     174 ..     119     182 .. 0.77
   3 ?    6.7   1.6    0.0072        12      12      74 ..     194     254 ..     182     262 .. 0.59

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.1
                 XXXXXXHHHHHHHHHHHHHHHH CS
      FliD_N  28 tklewkqsayrelnsklsnlks 49 
                 ++l +k+ a+++l++++++l  
  KHJ31341.1 108 ESLAQKKLALKSLKTEVADLVV 129
                 6778888899999999888755 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0015
                 XXXXXXXXXXXXXXXXXXXXHHHHHHHHHHHHHHHHHHHHHXXGGG CS
      FliD_N  14 kaerakldkleqkktklewkqsayrelnsklsnlksalsalsksst 59 
                 + e++   +l+qk   ++ + +++++l skl++l++++++l++ ++
  KHJ31341.1 130 ELEKK-GRELYQKYHHIQLQTTELQALPSKLKSLEESIKSLKNLQN 174
                 44444.45799*************************9987755333 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0072
                 XXXXXXXXXXX.XX.XXXXXXXXXHHHHHHHHHHHHHHHHHHHHHXXGGGGGXEEEEECSTTTEE CS
      FliD_N  12 lmkaerakldk.le.qkktklewkqsayrelnsklsnlksalsalsksstfsakkatssdesvvt 74 
                 l + e+a+ld+ ++  +++ l  k +++++ln++l +l+   ++l  sst+sa +a+  +e+ ++
  KHJ31341.1 194 LREKETAELDRqINhLQEAILPRKTNELETLNTELHSLEA--KSL--SSTLSAEEAKKRKENSIN 254
                 4455555555543324555666777777777777777777..433..555555555555444444 PP

>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   5.9    0.0027       4.4     195     320 ..     110     226 ..      64     275 .. 0.59

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0027
       LMBR1 195 ksdldeelkklyfeaaklntekeeaereledllkevkklrksisesdplrkyleeilk.............................kvPeeiaeklks 264
                  ++++  lk+l++e+a l  e+e++ rel ++  +++ ++++++      k lee +k                             k           
  KHJ31341.1 110 LAQKKLALKSLKTEVADLVVELEKKGRELYQKYHHIQLQTTELQALPSKLKSLEESIKslknlqnvetnpnlllpldktlelielreK----------- 197
                 56777889******************************99999877755577777777333333333333332222222222222221........... PP

       LMBR1 265 nenkteeslaklekqlikalqkrertekqwkrllekalelediiknksskekefks 320
                                          + ++++r +++    e+i+  k+++ + ++ 
  KHJ31341.1 198 -------------------------ETAELDRQINHL--QEAILPRKTNELETLNT 226
                 .........................222222222222..22222222222222222 PP

>> EMP24_GP25L  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   1.1     0.043        70     104     135 ..     142     174 ..      98     178 .. 0.72
   2 ?    7.8   1.3    0.0018       2.9     108     159 ..     216     267 ..     193     278 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.043
  EMP24_GP25L 104 ykdsak.kekletleselkkleekldsikreqk 135
                  y+ ++  +++l+ l s+lk lee+++s+k+ q+
   KHJ31341.1 142 YHHIQLqTTELQALPSKLKSLEESIKSLKNLQN 174
                  333333578888888999999999999988876 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0018
  EMP24_GP25L 108 akkekletleselkkleekldsikreqkylrereerlrdtnestnsrvvwws 159
                   k+++letl++el+ le k  s+    +  ++r+e+  +  +++++r  ww+
   KHJ31341.1 216 RKTNELETLNTELHSLEAKSLSSTLSAEEAKKRKENSINVENDLEERARWWT 267
                  6899***********************************************8 PP

>> DUF3552  Domain of unknown function (DUF3552)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   8.7    0.0062        10      64     137 ..     101     174 ..      98     178 .. 0.92
   2 ?    5.7   6.4    0.0053       8.6      94     155 ..     185     249 ..     184     266 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0062
     DUF3552  64 klreelekelkerrnelqrlekRllqkeetLdrkeeslekkeesleekekelkqkeqsleekeeeleelveeqr 137
                 +   ele+ l +++  l++l + + +   +L++k ++l +k ++++ ++ el++  ++l++ ee++++l++ q+
  KHJ31341.1 101 QENVELEESLAQKKLALKSLKTEVADLVVELEKKGRELYQKYHHIQLQTTELQALPSKLKSLEESIKSLKNLQN 174
                 5567999***********************************************************99998886 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0053
     DUF3552  94 LdrkeeslekkeesleekekelkqkeqsleekeeeleelveeqrqeLer..i.sgLtkeeAkeil 155
                 Ld+  e +e +e++  e ++++++ ++ +  ++++  e+++++ + Le   + s L++eeAk+  
  KHJ31341.1 185 LDKTLELIELREKETAELDRQINHLQEAILPRKTNELETLNTELHSLEAksLsSTLSAEEAKKRK 249
                 89999999999999999999999988887766666666677778888752332589999999865 PP

>> Csm1_N  Csm1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.8    0.0025       4.1      27      59 ..     101     133 ..      96     143 .. 0.86
   2 ?    6.3   0.9    0.0075        12      36      65 ..     145     174 ..     136     178 .. 0.86
   3 ?    3.0   0.5     0.079   1.3e+02      35      57 ..     191     213 ..     187     218 .. 0.87
   4 ?    3.5   2.1     0.057        93      35      62 ..     213     240 ..     207     252 .. 0.67

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0025
      Csm1_N  27 hENsvLsqkletkdqeiesLkeqlaeleekvke 59 
                 +EN+ L++ l +k+  ++sLk ++a l  ++++
  KHJ31341.1 101 QENVELEESLAQKKLALKSLKTEVADLVVELEK 133
                 7************************98776655 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0075
      Csm1_N  36 letkdqeiesLkeqlaeleekvkeleerrk 65 
                 ++ +++e+++L  +l++lee +k+l++ ++
  KHJ31341.1 145 IQLQTTELQALPSKLKSLEESIKSLKNLQN 174
                 678899*****************9998776 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.079
      Csm1_N  35 kletkdqeiesLkeqlaeleekv 57 
                  +e +++e  +L +q+++l+e +
  KHJ31341.1 191 LIELREKETAELDRQINHLQEAI 213
                 57899*************99975 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.057
      Csm1_N  35 kletkdqeiesLkeqlaeleekvkelee 62 
                  l  k++e+e+L  +l++le+k+ ++  
  KHJ31341.1 213 ILPRKTNELETLNTELHSLEAKSLSSTL 240
                 5678999999999999999998765433 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       2.4   3.9e+03      83      93 ..       4      14 ..       1      21 [. 0.57
   2 ?   12.1   3.9   0.00011      0.18      38      85 ..     123     170 ..     102     178 .. 0.91
   3 ?    2.0   0.9      0.16   2.6e+02      41      78 ..     197     232 ..     181     241 .. 0.65

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.4
     BLOC1_2 83 eLDeyskeLEa 93
                 LD  +k+LE+
  KHJ31341.1  4 SLDDVIKSLEQ 14
                34555555543 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 0.00011
     BLOC1_2  38 klkdvaaslekkleklnekyeelqpylqqidqiekqvteLeeavseLD 85 
                 +++d + +lekk  +l +ky+++q + ++++++  ++++Lee ++ L 
  KHJ31341.1 123 EVADLVVELEKKGRELYQKYHHIQLQTTELQALPSKLKSLEESIKSLK 170
                 67899999**********************************999885 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.16
     BLOC1_2  41 dvaaslekkleklnekyeelqpylqqidqiekqvteLe 78 
                 +++a+l +++++l+e  + l  + ++++ +++++ +Le
  KHJ31341.1 197 KETAELDRQINHLQE--AILPRKTNELETLNTELHSLE 232
                 455566666666665..555556666666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1456  (0.0812092); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 1914.58
//
Query:       KHJ31342.1  [L=622]
Description: putative phospholipid:diacylglycerol acyltransferase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.6e-104  350.2   0.5     2e-104  349.9   0.5    1.1  1  LCAT      Lecithin:cholesterol acyltransferase
  ------ inclusion threshold ------
      0.014   14.9   0.0      0.022   14.3   0.0    1.4  1  Lipase_2  Lipase (class 2)
      0.024   13.8   0.0       0.04   13.0   0.0    1.3  1  DUF1749   Protein of unknown function (DUF1749)
      0.087   12.3   0.0       0.16   11.5   0.0    1.3  1  DUF900    Alpha/beta hydrolase of unknown function (DUF900)


Domain annotation for each model (and alignments):
>> LCAT  Lecithin:cholesterol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  349.9   0.5  4.4e-108    2e-104       1     390 [.     162     580 ..     162     582 .. 0.95

  Alignments for each domain:
  == domain 1  score: 349.9 bits;  conditional E-value: 4.4e-108
        LCAT   1 yFrkelWldldmllslvvd..cwlknlelvldkstglqedapgvkiRadqGfeaieyldkskiagkqyeiwkklvknlvkiGyeknktvvaapYDWRls 97 
                 yFrk+lW++++m+++lv+d   w k  +++l+k+tgl +   g+k+Ra+qGf a++++    i+g  y+iw+k+++nl+ iGy + +    a+YDWRls
  KHJ31342.1 162 YFRKRLWGSWSMMRALVLDkeGWKK--HIMLNKKTGL-DPDDGIKLRAAQGFDATDFF----ITG--YWIWNKILENLATIGYDPTN-SYTAAYDWRLS 250
                 9******************999999..**********.5567****************....***..******************99.88999****** PP

        LCAT  98 ...leerdkYfskLkelieealklsgkkvvliaHSmGnllvlyflkwveaea.......WvdqhikafislgapllGsvkavkallsGenkgipvlsel 186
                    le rd+Yf++Lk+ ie ++k s+kkvvli+HSmG+++++yf++wv +         Wv++ i+++i++++ +lG++k + ++lsGe+k++++l+++
  KHJ31342.1 251 yanLEIRDQYFTRLKKYIEMSQKISNKKVVLISHSMGSQVIFYFFHWVASPRggnggddWVENNIDSWINISGCMLGAIKGLSSMLSGEMKDTAQLNSF 349
                 **99*******************************************9998899********************************************* PP

        LCAT 187 tlrvlsksfsss............lsllPkgeevlwkdvawpsdeiliqtpsinltegalvrffsdevdlkdllsftlnvlagwvmvkvaedldgglsk 273
                 ++++l+k+ s+             +s+lP g++ +w+++ w++de l q+ s   +  ++++  s+++++++ l +++nv ++w++ +v + +++g+++
  KHJ31342.1 350 AVYGLEKFLSKGeraeiframpgvSSMLPMGGNAIWGNATWAPDE-LDQN-SRYGQSLKFKQINSQNLTVEESLAYLMNVAEDWYQDHVRKSYSHGVAH 446
                 **********999********************************.4444.433345567777999********************************* PP

        LCAT 274 lekelkk..lkkkkyvkeeetklpeaPgvkvyciygvglptergyvyapekkssplnyilsdi.dyeteesivskdGdetvpkeslel.Ckk.Wqd... 364
                 +  e++k    + k+v++ et+lp aP+ k+yc yg+g+pter+y y  ++ s  ++ i + i  ++ ++++++++Gd+tv++ s    C+k W+    
  KHJ31342.1 447 TTIEVEKneNDPRKWVNPLETRLPIAPNLKIYCFYGIGKPTERAYFYRSSDSSTSDIGIDTTIsSGNIDHGVILGEGDGTVNLLSVGYmCHKgWNIhry 545
                 *******878899***************************************9999999877625799*****************9866*****98999 PP

        LCAT 365 nkakvkvtvaelkeek.........rsaehvellv 390
                 n+ k+kv v e+ +e+         + a+hv++l+
  KHJ31342.1 546 NPSKIKVKVFEMLHEPdrfnprggpKTADHVDILG 580
                 ***************9*****************97 PP

>> Lipase_2  Lipase (class 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0     5e-06     0.022      18      90 ..     223     292 ..     218     453 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5e-06
    Lipase_2  18 lskliqkflekgyteaelYattygdteestslerlekCeyvkqlRklilaVlkyTgakkvdivahsmGvpiaR 90 
                 ++k+++++ + gy   + Y+  y+ + +  +le  +  +y ++l+k i++ +k  ++ kv  ++hsmG+ +  
  KHJ31342.1 223 WNKILENLATIGYDPTNSYTAAYDWRLSYANLEIRD--QYFTRLKKYIEMSQKISNK-KVVLISHSMGSQVIF 292
                 8999999****************9988855555555..9****************99.***********9865 PP

>> DUF1749  Protein of unknown function (DUF1749)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   8.8e-06      0.04      87     123 ..     261     295 ..     238     321 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 8.8e-06
     DUF1749  87 ieklveYlkktksGeekkekvvlmGHstGsqdvlyYl 123
                  ++l +Y++  +  + +++kvvl+ Hs Gsq ++y+ 
  KHJ31342.1 261 FTRLKKYIEMSQ--KISNKKVVLISHSMGSQVIFYFF 295
                 556667777664..889**************887765 PP

>> DUF900  Alpha/beta hydrolase of unknown function (DUF900)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.5e-05      0.16      80     109 ..     264     292 ..     255     303 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.5e-05
      DUF900  80 lekllrylatkksakkihllaHSmGtwlvl 109
                 l+k +++ ++  s+kk+ l+ HSmG++++ 
  KHJ31342.1 264 LKKYIEMSQK-ISNKKVVLISHSMGSQVIF 292
                 6666665554.499*************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (622 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 4004.97
//
Query:       KHJ31343.1  [L=536]
Description: putative transmembrane protein pft27 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-41  138.0  21.8      2e-20   72.9   5.9    2.2  2  UPF0016   Uncharacterized protein family UPF0016
  ------ inclusion threshold ------
      0.079   11.2   1.1       0.13   10.5   1.1    1.2  1  DUF2070   Predicted membrane protein (DUF2070)


Domain annotation for each model (and alignments):
>> UPF0016  Uncharacterized protein family UPF0016
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.2   7.9   7.7e-24   6.9e-20       3      75 .]     271     343 ..     269     343 .. 0.98
   2 !   72.9   5.9   2.2e-24     2e-20       1      75 []     452     526 ..     452     526 .. 0.99

  Alignments for each domain:
  == domain 1  score: 71.2 bits;  conditional E-value: 7.7e-24
     UPF0016   3 aflliflaElGDkTqlaaalLaarykplpVflGavlAlalmtvlsvllGsslakrlperlielvaavlFllfG 75 
                 ++++i+++E+GDkT+l+a+l+a++++ l Vf +a+ Al++mtvls++lG+++ +++p+r+++++aa lF++fG
  KHJ31343.1 271 SLTMILFSEIGDKTFLVAVLMAMKNDRLLVFSAAFSALLVMTVLSATLGHAVPTLIPKRFTNFLAAGLFIIFG 343
                 899**********************9999*******************************************9 PP

  == domain 2  score: 72.9 bits;  conditional E-value: 2.2e-24
     UPF0016   1 laaflliflaElGDkTqlaaalLaarykplpVflGavlAlalmtvlsvllGsslakrlperlielvaavlFllfG 75 
                 +++f+++flaE+GD++q+a++++aa +++++V++Gav+++a++t+++v+ G+ +a++++++l++  +a +Fl+fG
  KHJ31343.1 452 VQTFVMTFLAEWGDRSQIATIAMAAGQDYWWVTAGAVCGHAACTGVAVVGGRVIAGKVSMKLVTQGGAWSFLVFG 526
                 589***********************************************************************9 PP

>> DUF2070  Predicted membrane protein (DUF2070)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.1   1.4e-05      0.13      38     117 ..     265     347 ..     247     358 .. 0.53

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 1.4e-05
     DUF2070  38 lfgillfglpalvaflltlpvlrilggrltykrs.lflalltelivviisllaillsall...qalvllalvlslalvfalrll 117
                 l++++l +  +l++ + ++ +l  +   ++  r  +f a+++  ++v ++l a+l  a+    ++ ++++l+ +l+++f+lrll
  KHJ31343.1 265 LHSYFLSLTMILFSEIGDKTFLVAVLMAMKNDRLlVFSAAFS-ALLVMTVLSATLGHAVPtliPKRFTNFLAAGLFIIFGLRLL 347
                 444555555555555555555555555566666633333333.33333233333322222355666666666666666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       891  (0.049696); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 3993.72
//
Query:       KHJ31344.1  [L=121]
Description: hypothetical protein EV44_g0239 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0075   16.8   0.1     0.0075   16.8   0.1    1.7  2  RHS_repeat  RHS Repeat


Domain annotation for each model (and alignments):
>> RHS_repeat  RHS Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   4.2e-07    0.0075      18      37 ..      25      44 ..      12      45 .. 0.84
   2 ?   -3.1   0.2      0.68   1.2e+04       1       5 [.      90      94 ..      90      95 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 4.2e-07
  RHS_repeat 18 ttYtYDaqGrlttlTdpdGr 37
                tt +Y+++G+lt+lT+++++
  KHJ31344.1 25 TTMRYNERGNLTGLTTAQTT 44
                899**************986 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.68
  RHS_repeat  1 YDaaG 5 
                Y+++G
  KHJ31344.1 90 YNDNG 94
                99999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       357  (0.0199119); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 972.02
//
Query:       KHJ31345.1  [L=184]
Description: hypothetical protein EV44_g5919 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00084   19.6   2.8    0.00084   19.6   2.8    2.3  3  Retrotrans_gag  Retrotransposon gag protein
     0.0061   16.4   0.0     0.0091   15.9   0.0    1.3  1  DUF4939         Domain of unknown function (DUF4939)


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1      0.45     4e+03      34      52 ..      11      29 ..       5      51 .. 0.58
   2 ?   -1.3   0.0       0.3   2.7e+03      59      83 ..      71      96 ..      63     114 .. 0.74
   3 !   19.6   2.8   9.4e-08   0.00084       9      76 ..     116     183 ..     103     184 .] 0.86

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.45
  Retrotrans_gag 34 kaflktflpserkdqleee 52
                    +af + +l+++ + q++++
      KHJ31345.1 11 EAFSSSHLNPQSSLQSRNH 29
                    5555555555554444443 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.3
  Retrotrans_gag 59 gtesvreYvtrfktladqlde.vlte 83
                    g+  + eY++ ++t    l++ ++t+
      KHJ31345.1 71 GNTDILEYIKDLETRFLLLPNlSSTD 96
                    46777788888888777777655554 PP

  == domain 3  score: 19.6 bits;  conditional E-value: 9.4e-08
  Retrotrans_gag   9 gaAkswlkslvarsidasesWkdlkkaflktflpserkdqleeelsslrQgtesvreYvtrfktladq 76 
                     +a k+w++   + +++  + W  +++++++++++ e +++l ee + l+Q + +++ Y + f++l+ q
      KHJ31345.1 116 DAPKQWARVELRFDENLRDDWPAFREKLRSRYQNVELRKRLVEERQALKQLSLTIQAYKQSFEQLCYQ 183
                     5556666555555555589**********************************************987 PP

>> DUF4939  Domain of unknown function (DUF4939)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0     1e-06    0.0091      25     102 ..      62     145 ..      37     152 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1e-06
     DUF4939  25 pipfpetfdGdtdrlpefivqtlsymlvdektfssdalkvtflitrltGeal.......ewvlpyikkdspllndyraflaemkr 102
                  ip  ++f+G+td l e+i    +  l+  +  s+d lkv+  +  ltG  +       +w+   ++ d  l +d+ af ++++ 
  KHJ31345.1  62 LIPAFDKFNGNTDIL-EYIKDLETRFLLLPNLSSTDRLKVIIAVENLTGSREnqtdapkQWARVELRFDENLRDDWPAFREKLRS 145
                 389999*******87.9*******99999*******************9753222222278888888888888888888776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       922  (0.0514251); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1338.29
//
Query:       KHJ31346.1  [L=322]
Description: hypothetical protein EV44_g3357 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.044   13.8   0.1       0.12   12.4   0.1    1.7  1  ADAM_spacer1  ADAM-TS Spacer 1


Domain annotation for each model (and alignments):
>> ADAM_spacer1  ADAM-TS Spacer 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   6.8e-06      0.12      21      63 ..      32      75 ..      27      90 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.8e-06
  ADAM_spacer1 21 tiPaGAthIkirelkask.nyLalknsdgeylLngeltisasek 63
                   +Pa +t+I i++l+ s  n++a+  s++++ +n    ++++e+
    KHJ31346.1 32 SMPATSTNILINNLRLSInNHVAVSRSQEQSQFNQSSDVNTNEN 75
                  58**************9879****************99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1123  (0.062636); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2495.83
//
Query:       KHJ31347.1  [L=584]
Description: putative zinc finger protein pac1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.9e-06   28.0  15.5    0.00011   22.4   0.9    3.8  3  zf-C2H2      Zinc finger, C2H2 type
    3.8e-05   23.9   4.7     0.0009   19.6   2.0    2.9  2  zf-H2C2_2    Zinc-finger double domain
    0.00052   20.6   1.3    0.00052   20.6   1.3    3.6  3  zf-C2H2_4    C2H2-type zinc finger
  ------ inclusion threshold ------
      0.011   15.7   1.1      0.038   14.0   1.1    1.9  1  zf-C2H2_6    C2H2-type zinc finger
      0.046   14.0   0.8      0.046   14.0   0.8    3.0  4  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
       0.28    9.6   3.2       0.89    8.0   0.6    2.2  2  DUF629       Protein of unknown function (DUF629)
        0.4   11.3  10.7       0.65   10.7   2.1    4.0  4  FOXP-CC      FOXP coiled-coil domain
       0.48   10.8   4.5        2.9    8.2   2.8    2.9  2  zf-C2H2_8    C2H2-type zinc ribbon


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   1.1    0.0045        10       2      23 .]      37      61 ..      36      61 .. 0.93
   2 !    7.1   0.8    0.0037       8.3       2      23 .]      73      96 ..      72      96 .. 0.93
   3 !   22.4   0.9   4.9e-08   0.00011       3      23 .]     104     124 ..     104     124 .. 0.99

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0045
                EET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2  2 kCp..dCgksFkrksnLkrHirt.H 23
                +C   +C++++ + + L +Hi+  H
  KHJ31347.1 37 VCQwdKCSERCVSAEALFNHICEkH 61
                69999****************9988 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0037
                EET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2  2 kCp..dCgksFkrksnLkrHirtH 23
                +C+   C  +   +++ ++Hir+H
  KHJ31347.1 73 TCGwaSCRTTTVKRDHITSHIRVH 96
                688889*****************9 PP

  == domain 3  score: 22.4 bits;  conditional E-value: 4.9e-08
                 ETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   3 CpdCgksFkrksnLkrHirtH 23 
                 C+ Cgk Fkr+ +Lk+H +tH
  KHJ31347.1 104 CDFCGKAFKRPQDLKKHVKTH 124
                 99******************9 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   2.0     4e-07    0.0009       3      26 .]      90     113 ..      88     113 .. 0.93
   2 ?    3.9   0.0     0.036        80       1      10 [.     116     125 ..     116     130 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 4e-07
   zf-H2C2_2   3 rrHirkHtgekpyeCplCdkaFkt 26 
                 + Hir+H + kp+ C++C+kaFk+
  KHJ31347.1  90 TSHIRVHVPLKPHGCDFCGKAFKR 113
                 58********************96 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.036
   zf-H2C2_2   1 nLrrHirkHt 10 
                 +L++H ++Ht
  KHJ31347.1 116 DLKKHVKTHT 125
                 69*******9 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.2      0.15   3.3e+02       3      20 ..      38      57 ..      36      57 .. 0.85
   2 ?   -0.0   0.4         1   2.3e+03       6      23 ..      79      96 ..      72      97 .. 0.52
   3 !   20.6   1.3   2.3e-07   0.00052       3      23 ..     104     124 ..     102     125 .. 0.96

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.15
   zf-C2H2_4  3 Cpi..CgksFsskkaLlrHl 20
                C +  C++++ s +aL +H+
  KHJ31347.1 38 CQWdkCSERCVSAEALFNHI 57
                66666**************6 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 1
   zf-C2H2_4  6 CgksFsskkaLlrHlkth 23
                C+++   ++++ +H++ h
  KHJ31347.1 79 CRTTTVKRDHITSHIRVH 96
                544444555556666655 PP

  == domain 3  score: 20.6 bits;  conditional E-value: 2.3e-07
   zf-C2H2_4   3 CpiCgksFsskkaLlrHlkth 23 
                 C++Cgk F+++++L++H+kth
  KHJ31347.1 104 CDFCGKAFKRPQDLKKHVKTH 124
                 ********************9 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   1.1   1.7e-05     0.038       2      24 ..     102     124 ..     102     126 .. 0.95

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.7e-05
   zf-C2H2_6   2 heCsvCsksFpslqaLggHkksH 24 
                 h C+ C+k F+  q+L +H k+H
  KHJ31347.1 102 HGCDFCGKAFKRPQDLKKHVKTH 124
                 88********************9 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       6.9   1.5e+04      18      24 ..      86      92 ..      81      93 .. 0.80
   2 ?   14.0   0.8   2.1e-05     0.046       4      24 ..     104     124 ..     102     124 .. 0.96
   3 ?   -2.7   0.1       3.7   8.2e+03      19      23 ..     353     357 ..     352     358 .. 0.85
   4 ?   -1.2   0.2       1.3   2.8e+03       6      15 ..     561     570 ..     561     571 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 6.9
                 HCCTTSH CS
  zf-C2H2_jaz 18 dnHlkSK 24
                 + H++S+
   KHJ31347.1 86 RDHITSH 92
                 6899997 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 2.1e-05
                  BTTTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz   4 CvlCdKyFksenaldnHlkSK 24 
                  C  C K Fk  ++l++H+k++
   KHJ31347.1 104 CDFCGKAFKRPQDLKKHVKTH 124
                  9******************86 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 3.7
                  CCTTS CS
  zf-C2H2_jaz  19 nHlkS 23 
                  nHlkS
   KHJ31347.1 353 NHLKS 357
                  9***9 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 1.3
                  TTTBBBSSHH CS
  zf-C2H2_jaz   6 lCdKyFksen 15 
                  +C+K+ k en
   KHJ31347.1 561 ICSKQLKEEN 570
                  6*****9998 PP

>> DUF629  Protein of unknown function (DUF629)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.6    0.0004      0.89      56      84 ..      35      65 ..      26      73 .. 0.83
   2 ?    1.6   0.1     0.035        79      58      81 ..     103     125 ..      94     146 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0004
      DUF629 56 fWvCrt..CsekfsdaeeckqHlvqeHvakl 84
                 +vC+   Cse++++ae   +H+ ++Hv+  
  KHJ31347.1 35 SLVCQWdkCSERCVSAEALFNHICEKHVGRK 65
                56887555*******************9864 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.035
      DUF629  58 vCrtCsekfsdaeeckqHlvqeHv 81 
                  C  C + f+ +++ k+H+   H 
  KHJ31347.1 103 GCDFCGKAFKRPQDLKKHVKT-HT 125
                 599***************965.44 PP

>> FOXP-CC  FOXP coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.1   0.00029      0.65       6      32 ..      37      63 ..      34      73 .. 0.84
   2 ?    3.0   0.2     0.072   1.6e+02       6      27 ..      73      94 ..      70     104 .. 0.89
   3 ?    0.1   0.1      0.59   1.3e+03      12      31 ..     107     125 ..     103     143 .. 0.81
   4 ?   -1.9   0.0       2.5   5.6e+03      20      58 ..     506     543 ..     500     546 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00029
     FOXP-CC  6 vCkWPgCekvledveeflkhlnseHal 32
                vC+W  C++ + ++e++ +h+ ++H  
  KHJ31347.1 37 VCQWDKCSERCVSAEALFNHICEKHVG 63
                8*********************99953 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.072
     FOXP-CC  6 vCkWPgCekvledveeflkhln 27
                +C W  C + + + ++ ++h++
  KHJ31347.1 73 TCGWASCRTTTVKRDHITSHIR 94
                7******************986 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.59
     FOXP-CC  12 CekvledveeflkhlnseHa 31 
                 C k+++  +++ kh+++ H+
  KHJ31347.1 107 CGKAFKRPQDLKKHVKT-HT 125
                 999***********976.44 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 2.5
     FOXP-CC  20 eeflkhlnseHalddkstaqlrvqmqvvqqlekqlvkEk 58 
                 ++  + l+++ +  dk+ + +   + v+++l + lv+E+
  KHJ31347.1 506 NSHAEPLDNSESARDKAEEAWIKNIRVIEALRN-LVNER 543
                 555566777778889999999999999988865.56665 PP

>> zf-C2H2_8  C2H2-type zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.3     0.097   2.2e+02      10      56 ..       2      56 ..       1      61 [. 0.83
   2 ?    8.2   2.8    0.0013       2.9      14      93 ..      50     128 ..      37     131 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.097
   zf-C2H2_8 10 afpnvrelaqhlrvhlspt........qslegklfrcstascaetfpsmqelvah 56
                + p +++l +   ++ spt         + + k + c    c+e   s + l+ h
  KHJ31347.1  2 SAPGPKDLQDSSATTSSPTtrppavaiAAATDKSLVCQWDKCSERCVSAEALFNH 56
                56788888888888888887888888778899************99999999888 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0013
   zf-C2H2_8  14 vrelaqhlrvhlsptqslegklfrcstascaetfpsmqelvahtklhykpnryfkcencllrfrthrslfkhlhvcsdqs 93 
                 ++ l +h+  +   ++s++   + c  asc  t    + + +h ++h  p +   c+ c   f+  + l kh++  +d+s
  KHJ31347.1  50 AEALFNHICEKHVGRKSTNNLNLTCGWASCRTTTVKRDHITSHIRVHV-PLKPHGCDFCGKAFKRPQDLKKHVKTHTDDS 128
                 5555666666666678999999************************96.888999*****************99888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (584 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       712  (0.0397122); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.58u 0.23s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 4077.85
//
Query:       KHJ31348.1  [L=324]
Description: hypothetical protein EV44_g6019 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       899  (0.0501422); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2428.19
//
Query:       KHJ31349.1  [L=1656]
Description: putative aaa family atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.2e-48  163.1   0.0    3.1e-41  140.9   0.0    3.2  3  AAA              ATPase family associated with various cellul
    3.9e-09   36.2   0.0    2.4e-08   33.6   0.0    2.4  2  AAA_lid_3        AAA+ lid domain
    2.8e-07   31.1   0.1    0.00013   22.4   0.1    3.1  2  AAA_16           AAA ATPase domain
    6.4e-07   29.3   0.0    1.1e-05   25.3   0.0    2.4  2  IstB_IS21        IstB-like ATP binding protein
      1e-05   25.7   0.0    4.4e-05   23.7   0.0    2.1  1  AAA_2            AAA domain (Cdc48 subfamily)
    3.2e-05   23.9   0.3    0.00042   20.3   0.0    3.0  3  AAA_5            AAA domain (dynein-related subfamily)
    0.00011   22.5   0.7      0.076   13.3   0.2    4.6  3  AAA_22           AAA domain
     0.0016   18.8   0.0       0.02   15.2   0.0    2.9  2  RNA_helicase     RNA helicase
     0.0039   17.4   0.0      0.015   15.4   0.0    2.1  1  AAA_33           AAA domain
     0.0041   17.6   0.8       0.13   12.7   0.1    3.4  3  IZUMO            Izumo sperm-egg fusion, Ig domain-associated
     0.0051   16.8   0.0      0.017   15.1   0.0    1.9  1  Bromodomain      Bromodomain
  ------ inclusion threshold ------
      0.011   16.2   0.6       0.21   12.1   0.0    3.1  2  ABC_tran         ABC transporter
      0.012   16.2   0.3      0.058   13.9   0.0    2.5  1  AAA_18           AAA domain
      0.014   14.7   0.0      0.032   13.4   0.0    1.6  1  TIP49            TIP49 P-loop domain
      0.014   14.9   0.0      0.041   13.4   0.0    1.8  1  AAA_25           AAA domain
      0.015   15.4   0.0          2    8.5   0.0    2.8  2  Sigma54_activ_2  Sigma-54 interaction domain
      0.021   14.2   0.1       0.11   11.9   0.0    2.1  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.022   14.5   0.0       0.12   12.1   0.0    2.3  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
      0.022   14.7   0.0       0.42   10.5   0.0    2.7  2  NACHT            NACHT domain
      0.035   14.0   0.0       0.34   10.8   0.0    2.6  2  AAA_3            ATPase family associated with various cellul
      0.037   14.1   0.0       0.16   12.0   0.0    2.2  1  AAA_14           AAA domain
      0.038   13.7   0.0        2.5    7.8   0.0    3.0  3  Sigma54_activat  Sigma-54 interaction domain
       0.05   13.3   0.0       0.13   12.0   0.0    1.6  1  AAA_30           AAA domain
      0.072   13.3   0.0       0.17   12.1   0.0    1.7  1  AAA_28           AAA domain
      0.074   12.6   0.0       0.18   11.3   0.0    1.6  1  AAA_7            P-loop containing dynein motor region


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.9   0.0   4.3e-44   3.1e-41       1     132 []     661     796 ..     661     796 .. 0.95
   2 !   18.4   0.0     3e-06    0.0022       1     122 [.     963    1077 ..     963    1084 .. 0.85
   3 ?   -2.5   0.0       8.9   6.4e+03      64      96 ..    1591    1628 ..    1580    1645 .. 0.78

  Alignments for each domain:
  == domain 1  score: 140.9 bits;  conditional E-value: 4.3e-44
                 EEEESSTTSSHHHHHHHHHHHH.....THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakel.....gvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteld 94 
                 vl++GppGtGKTlla+a+a ++     +++f+  +g++ lsk+vge+e+++r lf+ea++ + psi+f+DEid la+ rs+++++ + ++v++Ll+ +d
  KHJ31349.1 661 VLFHGPPGTGKTLLARALAASVgsrgqKITFYMRKGADALSKWVGEAERQLRLLFEEARKTQ-PSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALMD 758
                 79*******************844443588*******************************9.************************************ PP

                 HTTTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETTS CS
         AAA  95 gvkkkeskvivigatnrpdkldpallr.gRfdrkieiel 132
                 g++ + ++v+vigatnrpd++dpal+r gRfdr+++++l
  KHJ31349.1 759 GMDGR-GQVVVIGATNRPDNVDPALRRpGRFDREFYFPL 796
                 ****7.56****************************985 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 3e-06
                  EEEESSTTSSHHHHHHHHHHHH.THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHT CS
         AAA    1 vllyGppGtGKTllakavakel.gvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgv 96  
                  +l+ G pG+G ++l  a+ + + g ++ ++++++l s+     e+ + +lf+e+k+++ ps++ +  ++    +        ++ ++ ++l  l   
  KHJ31349.1  963 LLIEGEPGMGQSYLGAAILNYFeGLHVQSFDLATLYSDPNRSPEAALVQLFSEVKRHK-PSVIYLPSVETWYHTL-------SDAAITTFLGLLRSI 1051
                  5889*****************956*********************************8.************9998.......455555555555555 PP

                  TTSSSTEEEEEEESS.GGGSTHHHHST CS
         AAA   97 kkkeskvivigatnr.pdkldpallrg 122 
                      ++++v+g++ + p+k++ +l+r+
  KHJ31349.1 1052 PPT-DPILVLGISETpPKKISHELIRD 1077
                  553.349********999999999875 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 8.9
                  EETGGGHHHHH.....TTCCCHHHHHHHHHHHHHHHHT CS
         AAA   64 iDEidalaksr.....sgseseeeervvnqLlteldgv 96  
                  i+E+++++++      + + + +++ v+nqL++ +++ 
  KHJ31349.1 1591 IEELEQICRELmnglwQMRGEWNRNHVMNQLVNIFNDT 1628
                  67777777777777776667778888999998887765 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.0   3.4e-11   2.4e-08       5      42 ..     821     858 ..     819     875 .. 0.93
   2 ?   -2.2   0.0       5.3   3.8e+03      18      25 ..    1593    1600 ..    1580    1600 .. 0.88

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 3.4e-11
   AAA_lid_3   5 keLAerTeGySGADlaalcreAallAlrrgikeitmed 42 
                 + LA+ T+Gy GADl alc eAal+ ++r++++i m++
  KHJ31349.1 821 DSLAQVTKGYGGADLRALCTEAALNSIQRTFPQIYMSN 858
                 579****************************9999875 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 5.3
   AAA_lid_3   18 Dlaalcre 25  
                  +l+++cre
  KHJ31349.1 1593 ELEQICRE 1600
                  89*****8 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.1   1.8e-07   0.00013      24     127 ..     658     757 ..     628     769 .. 0.66
   2 ?    5.0   0.0     0.041        29      18      51 ..     957     987 ..     944    1084 .. 0.73

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 1.8e-07
      AAA_16  24 pelvllsGesGvGKsslvrellralekd..ggif.lrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleealaavpelagaea.sr 118
                 p+ vl++G++G+GK+ l+r+l+ ++  +  ++ f +r  +d l      s ++  + + + lr l +ea++++++       + la+v++ + ++   +
  KHJ31349.1 658 PRGVLFHGPPGTGKTLLARALAASVGSRgqKITFyMRKGADAL------SKWVGEA-E-RQLRLLFEEARKTQPSIIFFDEIDGLAPVRSSKQEQIhAS 748
                 499*******************999998544555577777776......6777777.3.4445555555554554444444444443444444433455 PP

      AAA_16 119 llellkrll 127
                 +  +l +l+
  KHJ31349.1 749 IVSTLLALM 757
                 555555555 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.041
      AAA_16  18 rvrsgrpelvllsGesGvGKsslvrellralekd 51 
                 rv +   + +l+ Ge+G+G s l  ++l+++e+ 
  KHJ31349.1 957 RVFR---PRLLIEGEPGMGQSYLGAAILNYFEGL 987
                 3333...5699************99999888754 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   1.5e-08   1.1e-05      47     130 ..     658     745 ..     638     754 .. 0.86
   2 ?    0.8   0.0      0.49   3.5e+02      50      67 ..     963     980 ..     958     991 .. 0.90

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 1.5e-08
   IstB_IS21  47 kenivllGpsGvGKshlaialgveavraglsvlfvr...vedLveelkrarrdgklaralkrllkvdllilDdl.gllpldqaeaell 130
                   ++++ Gp+G+GK+ la al+ +   +g +++f+    +++L + +  a+r+ +l  + +r ++++++  D++ gl p+ + ++e++
  KHJ31349.1 658 PRGVLFHGPPGTGKTLLARALAASVGSRGQKITFYMrkgADALSKWVGEAERQLRLLFEEARKTQPSIIFFDEIdGLAPVRSSKQEQI 745
                 567999**************************99853446789999***************************978888877776665 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.49
   IstB_IS21  50 ivllGpsGvGKshlaial 67 
                 +++ G +G+G s+l +a+
  KHJ31349.1 963 LLIEGEPGMGQSYLGAAI 980
                 6889**********9997 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.0   6.2e-08   4.4e-05       6     105 ..     661     759 ..     657     765 .. 0.87

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 6.2e-08
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS...EEEEETGGG-------------HHHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG...ivllDEidKihpkessgadvSregVqrdLLq 101
                 +l+ gp g+Gkt+la+ala      ++ + i++ +++ +   ++++ v + + +     + + +    i+++DEid  +p +ss+++  +  ++  LL 
  KHJ31349.1 661 VLFHGPPGTGKTLLARALAASVG--SRGQKITFYMRKGAD--ALSKWVGEAERQLRLLFEEARKTqpsIIFFDEIDGLAPVRSSKQEQIHASIVSTLLA 755
                 689*****************997..577788888999888..88888888888887777766666777*************99999999999******* PP

                 HHH- CS
       AAA_2 102 ileg 105
                 +++g
  KHJ31349.1 756 LMDG 759
                 **98 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   5.9e-07   0.00042       2     136 ..     661     784 ..     660     785 .. 0.73
   2 ?   -1.4   0.0         3   2.1e+03       2      19 ..     963     980 ..     962     990 .. 0.83
   3 ?   -2.1   0.1       4.9   3.5e+03      73     128 ..    1386    1443 ..    1385    1449 .. 0.76

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 5.9e-07
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..- CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEveraesevlnsLlslleerrlllee 98 
                 vl  GppGtgK+ la+ laa ++++ + + ++ +  ++ l  ++    g+++++   l ++ar  +++i+++DE++ + +   ++  ++       l  
  KHJ31349.1 661 VLFHGPPGTGKTLLARALAASVGSRGQKITFYMRKGADALS-KWV---GEAERQLRLLFEEARktQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLA 755
                 8999******************8888888888877777765.566...699999*********9999********977655544444443333333333 PP

                 SSSEEE---......-EEEEEESS--.-TT-TTHHHHT CS
       AAA_5  99 ggelvkaknddllerfrviatanpldrslnelspalrs 136
                 +   ++ + +     + vi+++n++d    +++palr+
  KHJ31349.1 756 LMDGMDGRGQ-----VVVIGATNRPD----NVDPALRR 784
                 3333333332.....78888888888....66777775 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 3
                 EEEE--SSSSHHHHHHHG CS
       AAA_5   2 vlLvGppGtgKselaerl 19 
                 +l+ G+pG g s l   +
  KHJ31349.1 963 LLIEGEPGMGQSYLGAAI 980
                 7999*******9987666 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 4.9
                  SGGG--HHHHHHHHHHHHSSEEE..-SSSEEE---.......-EEEEEESS--..-TT CS
       AAA_5   73 EveraesevlnsLlslleerrllleeggelvkakndd.llerfrviatanpld.rsln 128 
                  E+++ ++ +++ L+ +l+ +  + +    +  + ++  + + f+ i   n+++ + ++
  KHJ31349.1 1386 EITETQPLTQAHLNHVLNSDSPHSMTHSSERLVLKEAsHDSSFHEIVNLNTVSsKLSK 1443
                  899999999********99988888777777777766667778888888888854444 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.2   0.00011     0.076       9      31 ..     662     684 ..     657     776 .. 0.71
   2 ?   -0.2   0.0       1.5   1.1e+03      38     103 ..     856     922 ..     837     941 .. 0.76
   3 ?    1.2   0.0      0.56     4e+02       8      30 ..     963     985 ..     960    1047 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.00011
      AAA_22   9 vvtGesGtGKTtllrrlleqlde 31 
                 + +G++GtGKT+l+r l+ +   
  KHJ31349.1 662 LFHGPPGTGKTLLARALAASVGS 684
                 689**************998754 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.5
      AAA_22  38 erpevvfvtlpsst.sskdllrellralglelkaerlsseell.ealeqalraravielliiDEaqhl 103
                 ++ + +++++++ + + kd++  + + + ++  + + s  + l +a+e  lr++ ++  +i+DE   +
  KHJ31349.1 856 MSNDKLKIDATKIKvTAKDFMLSVQKMIPSSERS-TSSGAAPLpKAIEPLLRDQLKQIKFILDELIPM 922
                 5666678888888889999999999999998888.555555555**********99888999997665 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.56
      AAA_22   8 lvvtGesGtGKTtllrrlleqld 30 
                 l++ Ge+G+G ++l + +l+ ++
  KHJ31349.1 963 LLIEGEPGMGQSYLGAAILNYFE 985
                 6899*********9988887663 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   2.8e-05      0.02       1      41 [.     661     698 ..     661     732 .. 0.76
   2 ?   -1.5   0.0       4.7   3.4e+03       2      22 ..     964     984 ..     963    1004 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 2.8e-05
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnped 41 
                   ++++Gp+g+GK++la+ La+++ ++    +k ++y+r+ +d
    KHJ31349.1 661 VLFHGPPGTGKTLLARALAASVGSRG---QKITFYMRKGAD 698
                   689*******************9554...778899865544 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 4.7
  RNA_helicase   2 wlyGpsgeGKStlakeLakal 22 
                   ++ G++g G S+l   + + +
    KHJ31349.1 964 LIEGEPGMGQSYLGAAILNYF 984
                   689********9988876655 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   2.2e-05     0.015       2      32 ..     661     699 ..     661     812 .. 0.62

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2.2e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg........avllssdt 32 
                 vl++G+pG+GK+ la+ l++  g        + +   d+
  KHJ31349.1 661 VLFHGPPGTGKTLLARALAASVGsrgqkitfYMRKGADA 699
                 79****************987766656655555555555 PP

>> IZUMO  Izumo sperm-egg fusion, Ig domain-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       4.9   3.5e+03      75     109 ..     904     939 ..     884     943 .. 0.69
   2 ?    0.4   0.0       1.2   8.5e+02      54     110 ..    1124    1180 ..    1094    1187 .. 0.81
   3 !   12.7   0.1   0.00019      0.13      27     116 ..    1557    1648 ..    1540    1655 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 4.9
                 HHHS---H.HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       IZUMO  75 ltdsdlkg.elllkeLlwllqkqkkklkealkefqk 109
                 l  ++lk  +++l+eL+ +++k +   + + +++++
  KHJ31349.1 904 LLRDQLKQiKFILDELIPMRKKITALQEAMYEQYED 939
                 555556552566779999999888777777777766 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 1.2
                  SEEEHHHHHHHHHHHHHHHHHHHHS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
       IZUMO   54 gvvdeetlekvasslkkelkrltdsdlkgelllkeLlwllqkqkkklkealkefqke 110 
                  +++de +l  +  +   + ++++ ++ k+++ll+ L   +q   +++++  k+f+  
  KHJ31349.1 1124 RKLDELELAPLPANRIPSREEIKLQKKKDHHLLNLLKVAIQPIMEQIQKKYKKFRTP 1180
                  566666666666666666788999999**********************99999875 PP

  == domain 3  score: 12.7 bits;  conditional E-value: 0.00019
                  GHHHHHHHHHHHHHTTT---SGGGGGGSEEEHHHHHHHHHHHHHHHHHH..HHS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS--S CS
       IZUMO   27 hreklleraealledlsekelaenkflgvvdeetlekvasslkkelkrl..tdsdlkgelllkeLlwllqkqkkklkealkefqkealcpnk 116 
                  ++ +l+++  +l  d+s  e+a nkf+ v  ++ +e++ +  ++ ++ l  +  +++ ++++++L+++++ +++ ++e+ k+f+    c+n+
  KHJ31349.1 1557 SQPQLQSQPCELSIDISYIESALNKFVDVTHSNSIEELEQICRELMNGLwqMRGEWNRNHVMNQLVNIFNDTIRDINEMQKSFSSINHCSND 1648
                  5667777778888999999*************99999999999999988445679*****************************99888886 PP

>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   2.4e-05     0.017      40      71 ..    1236    1267 ..    1233    1278 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.4e-05
                   HHHHHHHHTT--SSHHHHHHHHHHHHHHHHHH CS
  Bromodomain   40 stIkkklesnkYksladfeadlkllfsNarky 71  
                   stI+++l ++ Y +++df ad++ l + ar+ 
   KHJ31349.1 1236 STIEERLSNGFYARPKDFLADIRSLAKDARRI 1267
                   89***************************997 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.7       2.1   1.5e+03      51      80 ..     131     192 ..     107     300 .. 0.73
   2 ?   12.1   0.0   0.00029      0.21       6      80 ..     653     740 ..     651     770 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 2.1
                 G..B-HHHCCHCEEEE-SS--S-TTSBHHHH..............................H CS
                 x..xxxxxxxxxxxxxxxxxxxxxxxxxxxx..............................x RF
    ABC_tran  51 e..qeleslrkeigvlpqepqlfpeltvren..............................e 80 
                 +  +++e+l+ke +v+++ep  +++++v+ +                               
  KHJ31349.1 131 HtvKKTEKLDKETQVIKEEPVSKNGMRVGATrtrmvtlkigtpkigktqrglrsatlarasS 192
                 13467888999999999998888888877766666666666666665555555544444440 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 0.00029
                 EEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGG...B-HHHCCHCEEEE-SS.--S-TTSBHHHH.........H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxx.xxxxxxxxxxxx.........x RF
    ABC_tran   6 lklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlke...qeleslrkeigvlpqe.pqlfpeltvren.........e 80 
                 +++ + + v + G+ G+GK+ L+++la  +     +i++ +++  +   +   +++++++ l++e  + +p +   ++          
  KHJ31349.1 653 FHVTPPRGVLFHGPPGTGKTLLARALAASVGSRGQKITFYMRKGADalsKWVGEAERQLRLLFEEaRKTQPSIIFFDEidglapvrsS 740
                 67777788999*********************999**988666666566899999999999999976777777665556777666542 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   8.1e-05     0.058       1      36 [.     661     697 ..     661     734 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.1e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.gvnlrdvakeng 36 
                 +l  G+pG+GKt la++L+ + g+ g++++++ +++ 
  KHJ31349.1 661 VLFHGPPGTGKTLLARALAASVGSrGQKITFYMRKGA 697
                 5778***************998778999999988765 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   4.5e-05     0.032      51      97 ..     659     708 ..     648     721 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.5e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelg...edvpfvalsgsevyslevkkte 97 
                 r+vL+ Gp+gtGkt la a++ ++g   +++ f + +g++  s  v  +e
  KHJ31349.1 659 RGVLFHGPPGTGKTLLARALAASVGsrgQKITFYMRKGADALSKWVGEAE 708
                 89********************9986668999999999988887665555 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   5.8e-05     0.041      36     110 ..     661     733 ..     655     780 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 5.8e-05
      AAA_25  36 allaGapgtGKttlaldlalava.tGkpwlgpvapeqgkVlyvsaEdsedelrrRlravgealrddarllvldlag 110
                 +l+ G+pgtGKt la  la++v  +G++ +  ++    +   +++E  + +lr  ++++++++  ++  ++  ++g
  KHJ31349.1 661 VLFHGPPGTGKTLLARALAASVGsRGQKITFYMRKGADALSKWVGEAER-QLRLLFEEARKTQ--PSIIFFDEIDG 733
                 5789******************999999988777777777777777777.7777777777766..45555555444 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.0    0.0028         2      24      76 ..     661     716 ..     654     752 .. 0.67
   2 ?    3.5   0.0       0.1        72      21      78 ..     960    1029 ..     947    1059 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0028
                      EEEEEETT--HHHHHHCC--TTS.-EE--.SSTTHHHH-HHHHHHHTTTSE.EEEE CS
  Sigma54_activ_2  24 vfltGekGsgkelvArlLhknsg.pwlei.fvverlaklpldlleqakggt.Lylk 76 
                      v+  G++G+gk+l Ar+L+ + g + ++i f + ++a++ ++++ +a+ ++ L+++
       KHJ31349.1 661 VLFHGPPGTGKTLLARALAASVGsRGQKItFYMRKGADALSKWVGEAERQLrLLFE 716
                      8999**************97654133444156777778887777776333213333 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.1
                       SS-EEEEEETT--HHHH.HHCC--TTS-EE--SSTTHHHH-HHHHHHHT...........TTSEEEEEE- CS
  Sigma54_activ_2   21 klpvfltGekGsgkelv.ArlLhknsgpwleifvverlaklpldlleqa...........kggtLylkdi 78  
                          +++ Ge+G g+++  A +L  ++g  ++ f++++l + p ++ e a           k+ ++yl+ +
       KHJ31349.1  960 RPRLLIEGEPGMGQSYLgAAILNYFEGLHVQSFDLATLYSDPNRSPEAAlvqlfsevkrhKPSVIYLPSV 1029
                       56799**********9857889999999*******99999885555544222222223336666666665 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00015      0.11      25      44 ..     661     680 ..     654     692 .. 0.89
   2 ?   -1.8   0.0       2.3   1.7e+03      25      42 ..     963     980 ..     960     993 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00015
  Mg_chelatase  25 lllvGppGsGKtmlakrlps 44 
                   +l+ GppG+GKt+la++l++
    KHJ31349.1 661 VLFHGPPGTGKTLLARALAA 680
                   79**************9975 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2.3
  Mg_chelatase  25 lllvGppGsGKtmlakrl 42 
                   ll+ G pG G++ l +++
    KHJ31349.1 963 LLIEGEPGMGQSYLGAAI 980
                   899*********998776 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00017      0.12      36      60 ..     661     685 ..     652     745 .. 0.81
   2 ?   -2.2   0.0       4.3     3e+03      36      54 ..     963     981 ..     958     991 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00017
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvk 60 
                 vl++GpPG Gkt la+ +a+ +g++
  KHJ31349.1 661 VLFHGPPGTGKTLLARALAASVGSR 685
                 9******************999875 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 4.3
      RuvB_N  36 vllyGpPGlGkttlakiia 54 
                 +l+ G PG+G++ l + i 
  KHJ31349.1 963 LLIEGEPGMGQSYLGAAIL 981
                 7999*******99976654 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00059      0.42       3      41 ..     661     694 ..     659     762 .. 0.83
   2 ?    0.6   0.0      0.64   4.6e+02       3      21 ..     963     981 ..     962    1016 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00059
                 EEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEE CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegklpqgafklvFfls 41 
                 v+ +G++G GKT L++ la    ++ +     k  F+++
  KHJ31349.1 661 VLFHGPPGTGKTLLARALAASVGSRGQ-----KITFYMR 694
                 789***************999888873.....4556655 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.64
                 EEEEC-TTTCHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqkla 21 
                 ++++Ge+G+G ++L + + 
  KHJ31349.1 963 LLIEGEPGMGQSYLGAAIL 981
                 689*********9987776 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00048      0.34       2      32 ..     661     691 ..     660     736 .. 0.91
   2 ?   -1.1   0.0       2.3   1.6e+03      46      87 ..    1362    1403 ..    1348    1423 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00048
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqf 32 
                 vl++g PG++ktll++ala +++ + ++i f
  KHJ31349.1 661 VLFHGPPGTGKTLLARALAASVGSRGQKITF 691
                 7899********************9999988 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 2.3
       AAA_3   46 vfeekekefefkkGpvfanllladeinrappktqsalleame 87  
                  v  ++ +e+++ +G v    +   ei  ++p tq+ l  +++
  KHJ31349.1 1362 VNGHSMNEMSIASGDVEDVAMQGTEITETQPLTQAHLNHVLN 1403
                  444566889999999998889999**********99876665 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00022      0.16       5     100 ..     661     771 ..     658     796 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00022
      AAA_14   5 lvitGaRrvGKTtllkqlikell.vkkesilyinldderdkk.ladpekllelileklkeekktylflDEiqev............pewekalkslvd. 88 
                 ++  G+  +GKT l++ l+ +     ++ ++y+    + ++k   + e+ l+l++e++++ + +++f+DEi  +             ++ ++l  l+d 
  KHJ31349.1 661 VLFHGPPGTGKTLLARALAASVGsRGQKITFYMRKGADALSKwVGEAERQLRLLFEEARKTQPSIIFFDEIDGLapvrsskqeqihASIVSTLLALMDg 759
                 56789999***********88885444444555444444433133445566777777555699********9887777777766666666666666664 PP

      AAA_14  89 .egknldvivtGS 100
                  +g +++v+v G 
  KHJ31349.1 760 mDG-RGQVVVIGA 771
                 333.666666665 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0    0.0035       2.5      23      48 ..     659     684 ..     648     702 .. 0.79
   2 ?   -1.2   0.0         2   1.4e+03      92     143 ..     721     774 ..     705     799 .. 0.58
   3 ?    1.6   0.0      0.27   1.9e+02      13      44 ..     951     982 ..     945     995 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0035
                      S-EEEECSTTSSHHHHHHHHHHHSTT CS
  Sigma54_activat  23 lsvlitGesGtGKellaraiheaskr 48 
                        vl +G  GtGK+llara+ ++   
       KHJ31349.1 659 RGVLFHGPPGTGKTLLARALAASVGS 684
                      569****************9875443 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 2
                      TTTSEEEEETGGGS-H...HHHHHHHHHHHHSEEESBTSSSEEE--EEEEEEESS CS
  Sigma54_activat  92 adgGtlfLDeigelpl...elQekLlrvlqegevervGsskeikvdvriiaatne 143
                      ++ +++f+Dei  l +   + Qe++   + +  +  + +    + +v +i atn+
       KHJ31349.1 721 TQPSIIFFDEIDGLAPvrsSKQEQIHASIVSTLLALMDGM-DGRGQVVVIGATNR 774
                      3457899999988764222556666666655544444333.33456666666665 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.27
                      HHHHHHCTSSS-EEEECSTTSSHHHHHHHHHH CS
  Sigma54_activat  13 eqikkvaktdlsvlitGesGtGKellaraihe 44 
                      +  +k    + ++li+Ge G G ++l  ai +
       KHJ31349.1 951 QDFEKSRVFRPRLLIEGEPGMGQSYLGAAILN 982
                      5555555666789************9988865 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00018      0.13      21      62 ..     661     700 ..     649     744 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00018
      AAA_30  21 avltGpAGtGKttalkalreaweaaggrviglAptgkaAkvL 62 
                 ++ +Gp+GtGKt + +al++ + ++g+++  +  +g  A++L
  KHJ31349.1 661 VLFHGPPGTGKTLLARALAASVGSRGQKITFYMRKG--ADAL 700
                 6789**********************9998775544..4444 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00024      0.17       2      23 ..     661     683 ..     660     727 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00024
      AAA_28   2 ivitGgestGKTtlleaLaar.g 23 
                 + + G+++tGKT l++aLaa  g
  KHJ31349.1 661 VLFHGPPGTGKTLLARALAASvG 683
                 6799***************7543 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00024      0.18      24      58 ..     649     683 ..     644     731 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00024
       AAA_7  24 yllelllknkkpvllvGptGtGKtviikdllkkld 58 
                  +l+ +++  + vl+ Gp GtGKt++++ l  ++ 
  KHJ31349.1 649 LFLKFHVTPPRGVLFHGPPGTGKTLLARALAASVG 683
                 67899999999***************999887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1656 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1532  (0.0854482); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        28  (0.00156172); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 1.13u 0.28s 00:00:01.41 Elapsed: 00:00:00.46
# Mc/sec: 10864.54
//
Query:       KHJ31350.1  [L=1274]
Description: hypothetical protein EV44_g6027 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1738  (0.0969379); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.87u 0.28s 00:00:01.14 Elapsed: 00:00:00.48
# Mc/sec: 8041.03
//
Query:       KHJ31351.1  [L=92]
Description: hypothetical protein EV44_g3334 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       263  (0.014669); expected 358.6 (0.02)
Passed bias filter:                      229  (0.0127726); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 699.84
//
Query:       KHJ31352.1  [L=1202]
Description: putative pre-mrna-processing atp-dependent rna helicase prp5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-50  168.8   0.0    2.7e-49  167.3   0.0    1.8  2  DEAD        DEAD/DEAH box helicase
    2.3e-26   92.3   0.0    1.3e-25   89.9   0.0    2.4  3  Helicase_C  Helicase conserved C-terminal domain
     0.0033   17.5   0.0      0.014   15.4   0.0    2.1  2  ResIII      Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.3   0.0   4.5e-53   2.7e-49       1     171 [.     593     762 ..     593     767 .. 0.94
   2 ?   -2.6   0.0      0.66   3.9e+03      38     105 ..     812     877 ..     805     892 .. 0.63

  Alignments for each domain:
  == domain 1  score: 167.3 bits;  conditional E-value: 4.5e-53
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS...TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet...kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldn 96 
                 t+iQ +aip+i++g+dv++ a+TGsGKT+af++p+++++ ++   +g++gp  li++PtreLa q+++++k f+  ++lr+++ +gg + +dq+++l++
  KHJ31352.1 593 TAIQMQAIPAIMSGRDVIGVAKTGSGKTMAFMLPMFRHIRDQrplEGSDGPIGLIITPTRELATQIHKECKPFLRAMGLRAVCAYGGAPIKDQIADLKR 691
                 79*************************************8889999***************************************************99 PP

                 TCSEEEEEHHHHHHHH..HCTS.SHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSH CS
                 xxxxxxxxxxxxxxxx..xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  97 gvdivvgtpgrlddll..stgk.lnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpk 171
                 g++i+v tpgr++dll  ++g+  nl++v+++VlDEadr+ d+gf++++ +i++++       + +rq+i++SAT+p+
  KHJ31352.1 692 GAEIIVCTPGRMIDLLaaNSGRvTNLRRVTYVVLDEADRMFDMGFEPQVMKIFANI-------RPDRQTILFSATMPR 762
                 9*************99884455377*******************************.......35678********96 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.66
                 HHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHH...TT.CSEEEEEH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xx.xxxxxxxx RF
        DEAD  38 ivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskld...ng.vdivvgtp 105
                 ++y+  +++  ++li +  +e   + l++l + +      +++i gg+++ d  s++d   +g + i+++t 
  KHJ31352.1 812 QLYD--KDEDARTLIFVDRQEKSDDLLKDLMRKGY----PCMSIHGGKDQIDRDSTVDdfkAGvIPIMIATS 877
                 5554..66667778888888877777777766666....456888888888888888533244667777665 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       2.5   1.5e+04      21      61 ..     647     691 ..     643     699 .. 0.68
   2 !   89.9   0.0   2.1e-29   1.3e-25       2     111 .]     802     914 ..     801     914 .. 0.92
   3 ?   -3.9   0.0       2.9   1.7e+04      78      95 ..    1038    1055 ..    1035    1059 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 2.5
                 EEESSHH...HHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHH CS
  Helicase_C  21 ifvntid...rlek.vklllekkgikvavlhgelpqnereeileq 61 
                 i+++t++   +++k +k +l+  g+++++ +g  p +++++ l++
  KHJ31352.1 647 IITPTRElatQIHKeCKPFLRAMGLRAVCAYGGAPIKDQIADLKR 691
                 666666644433335566767779999999999988888766655 PP

  == domain 2  score: 89.9 bits;  conditional E-value: 2.1e-29
                 HHHHHHHHH...HHTTTTSEEEEEESSHHHHHH..HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSS CS
  Helicase_C   2 kleallell...kleeeggkilifvntidrlek..vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlpr 95 
                 k+++llell     + e+ ++lifv ++++ ++   +l+  +kg+ +  +hg   q +r+ ++++f++g + ++iat+va+rG+d+++++lV+nfd+p 
  KHJ31352.1 802 KFHRLLELLgqlYDKDEDARTLIFVDRQEKSDDllKDLM--RKGYPCMSIHGGKDQIDRDSTVDDFKAGVIPIMIATSVAARGLDVKQLKLVVNFDAPN 898
                 67778888887788999************9995544444..77******************************************************** PP

                 SHHHHHHHHTTSSSTT CS
  Helicase_C  96 nvtsyiqriGRtgRag 111
                  +++y++r+GRtgRag
  KHJ31352.1 899 HLEDYVHRAGRTGRAG 914
                 **************97 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 2.9
                  SSSTSTTESEEEESSSSS CS
  Helicase_C   78 rGidipkvnlVinfdlpr 95  
                  +Gid+++  +Vi+ ++  
  KHJ31352.1 1038 KGIDLDGKITVIRTEPTS 1055
                  69**********998875 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   2.4e-06     0.014      26     170 ..     608     761 ..     590     762 .. 0.70
   2 ?   -3.7   0.0       1.7     1e+04      44      70 ..     809     835 ..     806     852 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2.4e-06
                 EEEEEESTTSTHHHHH.HHHHHHH-S..........-EEEEESSHHHHHHHHHHGGGGTGG.....GEEEESSS-B--.......-SEEEEEHHHHHHT CS
      ResIII  26 rglikmaTGtGKTlva.aklierllkkgkee.....kflflvprkslleqtleefkkflseayke.igkkvsgdkkkakekdstnkkilvttiqsldad 117
                  ++ ++ TG+GKT+   + + ++++ +++ e       l++ p+++l  q  +e k fl     + ++       k++ +  +  ++i+v t  ++   
  KHJ31352.1 608 DVIGVAKTGSGKTMAFmLPMFRHIRDQRPLEgsdgpIGLIITPTRELATQIHKECKPFLRAMGLRaVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDL 706
                 4666789*******985777777777777779***999*********************9998877333333333333344578889999999998888 PP

                 H........H.HHTTT-SEEEEETGGGTTS....TTTHHHHHT---.SEEEEEESS-S CS
      ResIII 118 seeeeeesee.llrdrfdviiiDEaHrlgak...kswreilekfke.avllglTATpe 170
                 +     +s +     r  +++ DEa r+ ++    ++ +i  ++++    + ++AT++
  KHJ31352.1 707 L---AANSGRvTNLRRVTYVVLDEADRMFDMgfePQVMKIFANIRPdRQTILFSATMP 761
                 8...333333033344449999**9999998554466666666644477788999986 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.7
                 HHHHH-S.....-EEEEESSHHHHHHH CS
      ResIII  44 lierllkkgkeekflflvprkslleqt 70 
                 l  +l+ k +  ++l++v+r++  + +
  KHJ31352.1 809 LLGQLYDKDEDARTLIFVDRQEKSDDL 835
                 556777887888999999998655444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1364  (0.0760779); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.04u 0.26s 00:00:01.30 Elapsed: 00:00:00.45
# Mc/sec: 8084.14
//
Query:       KHJ31353.1  [L=320]
Description: putative hmg box protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-07   31.8   0.5       0.03   14.9   0.1    2.8  2  HMG_box_2     HMG-box domain
    3.9e-07   30.4   2.7    0.00071   19.9   0.3    3.3  2  HMG_box       HMG (high mobility group) box
  ------ inclusion threshold ------
      0.022   14.7   0.1       0.25   11.3   0.0    2.1  2  TP_methylase  Tetrapyrrole (Corrin/Porphyrin) Methylases
      0.052   13.7   1.7       0.11   12.7   0.1    2.4  2  PI_PP_I       Phosphoinositide phosphatase insertion domain
       0.44   10.3   8.1          3    7.6   2.8    2.9  2  BRCA2         BRCA2 repeat


Domain annotation for each model (and alignments):
>> HMG_box_2  HMG-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1   8.4e-06      0.03      33      69 ..     169     201 ..     142     204 .. 0.81
   2 !   14.2   0.0   1.4e-05     0.049       4      68 ..     242     303 ..     239     306 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 8.4e-06
                 HHHTGGGHHHHHHS-HHHHHHHHHHHHHHHHHHHH-S CS
   HMG_box_2  33 aevsklcsekWkalseeeKekYeekAkedkkrydrea 69 
                 a    ++s+ Wk++s++ +e +e  Ak+ +++ d+  
  KHJ31353.1 169 A----EVSKGWKNISQSARERFEILAKANRVANDNKL 201
                 4....45779********************9988765 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 1.4e-05
                 .-SS--HHHHHHHTTHHHHHHHT---SSHHHHTGGGHHHHHHS-HHHHHHHHHHHHHHHHHHHH- CS
   HMG_box_2   4 pkaarnAYalfvqemipelkrkGnpviglaevsklcsekWkalseeeKekYeekAkedkkrydre 68 
                 pk +++ ++ fvqe+ +    k    + + e+sk++  +  als  e +kY+++  + +++y ++
  KHJ31353.1 242 PKHPTSRFLCFVQERFNSGDFK---GVDILEASKQLATEYFALSPTEHKKYQDMFIQSRNKYIKD 303
                 89999***********999888...58999************************99999998765 PP

>> HMG_box  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.1   0.00065       2.3      34      65 ..     170     201 ..     159     204 .. 0.82
   2 !   19.9   0.3     2e-07   0.00071       1      65 [.     242     304 ..     242     307 .. 0.91

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00065
                 HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH CS
     HMG_box  34 klgekWkalseeeKkkYeekaekekaryekek 65 
                 ++++ Wk+ s+++++++e  a++ +   + + 
  KHJ31353.1 170 EVSKGWKNISQSARERFEILAKANRVANDNKL 201
                 46889*****************9998766655 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 2e-07
                 --SS--HHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH CS
     HMG_box   1 pkRplsafflfskeqraklkaenPelknaeiskklgekWkalseeeKkkYeekaekekaryekek 65 
                 pk p+s f+ f++e   +      +  + e sk+l+ ++ als+ e kkY++++ + + +y k++
  KHJ31353.1 242 PKHPTSRFLCFVQERFNSG--DFKGVDILEASKQLATEYFALSPTEHKKYQDMFIQSRNKYIKDY 304
                 899**********999875..555788999*******************************9987 PP

>> TP_methylase  Tetrapyrrole (Corrin/Porphyrin) Methylases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   6.9e-05      0.25     126     183 ..      70     125 ..      64     133 .. 0.82
   2 ?    1.0   0.0     0.097   3.5e+02      21      49 ..     187     221 ..     175     242 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.9e-05
  TP_methylase 126 arlgiplteggevlsvllpglakeeereleallangdtlvllkaprklaelaelLkea 183
                   +r+gip +++  v+  +  ++ k++ ++l+++ ++++t vl+k prk+++++ +L ++
    KHJ31353.1  70 SRSGIPAGKSTRVSKSS-VSKVKNKSQKLKQI-KRKQTTVLVKKPRKAKKVLSELEKK 125
                   79999999988888777.44456788899886.66*******************9877 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.097
  TP_methylase  21 ralktadvvlgddsraleilldllaeel.......e 49 
                   ++l++a  v+ d+ +  e+l ++ +e+        +
    KHJ31353.1 187 EILAKANRVANDN-KLKEWLSQYTPEQIriannarK 221
                   799******9999.9*******99997666543322 PP

>> PI_PP_I  Phosphoinositide phosphatase insertion domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.76   2.7e+03      35      35 ..     106     106 ..      82     137 .. 0.49
   2 ?   12.7   0.1   3.1e-05      0.11       6      79 ..     141     216 ..     139     236 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.76
                 H CS
     PI_PP_I  35 q 35 
                 +
  KHJ31353.1 106 T 106
                 1 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 3.1e-05
                 HCS-HHHHHHHHC--TT--SHHHHHHHHHHHHHHHHHHHHH-S...SHHHHHHHHHCT-SS--HHHHTS-HHHHHHH CS
     PI_PP_I   6 rkLeeyqqaYflnleskeaslkklkqdlnqfllkWeeikktsl...sLeedLnkiannktplPsWfnelskaqqell 79 
                 +kL++  ++ ++ ++ k +s  ++++++ +  + W++i +++    ++ +  n++an++  l +W+++  ++q ++ 
  KHJ31353.1 141 KKLPSSARTVYMAVNLKGTSGGEITSKFAEVSKGWKNISQSARerfEILAKANRVANDN-KLKEWLSQYTPEQIRIA 216
                 68999999999***************************988764457888999999987.9********99987665 PP

>> BRCA2  BRCA2 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   2.8   0.00084         3      12      27 ..      77      92 ..      76      92 .. 0.95
   2 ?    4.6   0.2    0.0073        26      23      33 .]     113     123 ..     113     123 .. 0.91

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00084
       BRCA2 12 GKkIrVSkesLqKAkk 27
                GK+ rVSk+s +K+k+
  KHJ31353.1 77 GKSTRVSKSSVSKVKN 92
                9*************97 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0073
       BRCA2  23 qKAkklFseiE 33 
                 +KAkk++se E
  KHJ31353.1 113 RKAKKVLSELE 123
                 6********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1901  (0.106029); expected 358.6 (0.02)
Passed bias filter:                      568  (0.0316805); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 2499.99
//
Query:       KHJ31354.1  [L=401]
Description: hypothetical protein EV44_g3430 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0065   17.1   0.0      0.022   15.4   0.0    1.9  1  Asp_protease_2  Aspartyl protease
  ------ inclusion threshold ------
       0.12   12.1   0.0       0.21   11.3   0.0    1.3  1  RVP_2           Retroviral aspartyl protease


Domain annotation for each model (and alignments):
>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   2.4e-06     0.022      13      85 ..     270     344 ..     264     349 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2.4e-06
  Asp_protease_2  13 llDTGasttlispelaeklglkvreseltvrvsgaggevkarlvrldslklgg.ltlknvpalvld..lgeeidgl 85 
                     ++D Ga+ +lis+ la+ l+ ++ +++ ++++ +a g+ + +++ + ++++g   +++  +alvl+   g++  ++
      KHJ31354.1 270 HVDQGADLNLISDYLAKILKFQTIKLPKPILFGTAEGRLTNAIH-FTKIRIGVsGVWRFAEALVLPpaSGNPCSII 344
                     79***********************************9888865.6788887633566677888884434444455 PP

>> RVP_2  Retroviral aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.4e-05      0.21      33     124 ..     267     360 ..     243     370 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.4e-05
       RVP_2  33 atvLfdsGasHsFiskafvsklklkveaLstpllietPvgssvtakeicksveieiqgiefladlilLdlkd...lDviLgmdWLsknkanidca 124
                  +   d Ga    is   ++ lk ++ +L +p+l  t  ++++t     +++ i + g    a+ ++L+  +     +iL + WL    +n+d+ 
  KHJ31354.1 267 NSTHVDQGADLNLISDYLAKILKFQTIKLPKPILFGTA-EGRLTNAIHFTKIRIGVSGVWRFAEALVLPPASgnpCSIILSLPWLFDVCGNLDIP 360
                 44567999999***************************.788887777889*****997666666666543323379********9999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       846  (0.0471861); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3139.38
//
Query:       KHJ31355.1  [L=209]
Description: hypothetical protein EV44_g4040 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1495.46
//
Query:       KHJ31356.1  [L=313]
Description: hypothetical protein EV44_g4611 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       660  (0.0368119); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.21s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2467.68
//
Query:       KHJ31357.1  [L=361]
Description: putative xylitol dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.3e-30  103.1   0.8    1.4e-29  102.1   0.1    1.8  2  ADH_N           Alcohol dehydrogenase GroES-like domain
    9.2e-23   80.6   0.1    1.9e-22   79.7   0.1    1.5  1  ADH_zinc_N      Zinc-binding dehydrogenase
    6.8e-10   38.8   0.1    1.1e-09   38.1   0.1    1.3  1  Glu_dehyd_C     Glucose dehydrogenase C-terminus
    2.3e-05   25.4   0.1    7.3e-05   23.8   0.0    1.9  2  ADH_zinc_N_2    Zinc-binding dehydrogenase
     0.0022   17.3   0.2     0.0047   16.2   0.2    1.6  1  Pyr_redox_2     Pyridine nucleotide-disulphide oxidoreductase
     0.0055   16.0   0.6     0.0099   15.2   0.6    1.3  1  AlaDh_PNT_C     Alanine dehydrogenase/PNT, C-terminal domain
  ------ inclusion threshold ------
       0.02   15.0   0.0      0.038   14.1   0.0    1.4  1  FtsJ            FtsJ-like methyltransferase
      0.023   14.0   0.1       0.04   13.2   0.1    1.4  1  Pyr_redox_3     Pyridine nucleotide-disulphide oxidoreductase
      0.062   12.7   0.0        0.1   12.0   0.0    1.2  1  2-Hacid_dh_C    D-isomer specific 2-hydroxyacid dehydrogenase
      0.062   12.9   0.1       0.11   12.0   0.1    1.4  1  UDPG_MGDP_dh_N  UDP-glucose/GDP-mannose dehydrogenase family,


Domain annotation for each model (and alignments):
>> ADH_N  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.1   0.1   7.8e-33   1.4e-29       1     109 []      35     146 ..      35     146 .. 0.96
   2 ?   -2.1   0.1       1.9   3.4e+03      52      65 ..     172     185 ..     164     197 .. 0.72

  Alignments for each domain:
  == domain 1  score: 102.1 bits;  conditional E-value: 7.8e-33
                 TTEEEEEEEEEEE-HHHHHHHTTS..TTTTSSSSEE---EEEEEEEEESTT-CS--TT-EEEE-SEEE-SSSHHHHTT-GGG-TTBEETTTS.S-SSSB CS
       ADH_N   1 pgevlikvkaagiCgsDlhilkgg..kelevklplilGHEivGeveevgpevkklkvGdrVvvepliscgeCaaCkegeenlCeeakllgvs.ldGgfa 96 
                 p++v++ ++++giCgsD+h++++g   ++  k p++lGHE +G+++++g++vk+l+vGdrV++ep ++c +C++C+ g +nlC ++k+  +  + G+++
  KHJ31357.1  35 PHDVIVAINYTGICGSDVHYWHNGaiGNFILKEPMVLGHESAGTIVSIGSGVKTLQVGDRVAIEPGTPCRRCEECRAGFYNLCLDMKFAATPpYGGTLT 133
                 689*******************998889999***********************************************************998999999 PP

                 SEEEECGGGEEEE CS
       ADH_N  97 eyvvvpekklvkl 109
                   + +pe++++kl
  KHJ31357.1 134 GFYAAPEDFCYKL 146
                 9999999999985 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.9
                 S--TT-EEEE-SEE CS
       ADH_N  52 klkvGdrVvvepli 65 
                 +lk G+ Vvv  + 
  KHJ31357.1 172 RLKPGQSVVVMGAG 185
                 58899999987655 PP

>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.7   0.1     1e-25   1.9e-22       1     129 [.     186     318 ..     186     319 .. 0.91

  Alignments for each domain:
  == domain 1  score: 79.7 bits;  conditional E-value: 1e-25
                 HHHHHHHHHHHHTT-.EEEEEESSHHHHHHHHHTTESEEEET.....TTCHHHHHHHHHTTTSSEEEEEESSCSHHHHHHHHHCEEEEEEEEECSCTSS CS
  ADH_zinc_N   1 gvGlaavqlAkalGa.eviavdsseeklelakklGadeviny.....keadlverikeltggegvdvvfecvGsgatleaalkllkpgGrlvvvGggkg 93 
                 ++Gl+ +++Aka+Ga +++ vd+++++ e+a ++ a++++ +     +e +    i+++  g+g+dvv++++G++ +++++l ++++gG  v  G+gk 
  KHJ31357.1 186 PIGLLCCAVAKAFGAsKIVSVDIQSSRTEFAIQFSATHTFIPdrvsaEE-NAARIIEQAVLGNGADVVIDASGAEPSIQTSLHIVRRGGVYVQGGMGKP 283
                 79**************************************997875333.66666666667**********************************9888 PP

                 EEEEEHHHHHHTT-EEEEE-SSCHHHHHHHHHHHHH CS
  ADH_zinc_N  94 eeefdlrnlllkeksilGsllgslreefkealdlla 129
                 +  f++  l  ke++++Gs++++   ++k a++l++
  KHJ31357.1 284 DINFPILALCIKEVTVRGSFRYK-GGDYKLAVELVS 318
                 888********************.9***99999975 PP

>> Glu_dehyd_C  Glucose dehydrogenase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.1   6.1e-13   1.1e-09       4     203 ..     155     345 ..     152     355 .. 0.71

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 6.1e-13
  Glu_dehyd_C   4 gvLvEPisiveKaielaeasrsafewep.esalvlGaGslGLLalalleaeerglervyvlg.rrdrpdptidlveelGatYvdsretpvdeipe... 96 
                  g L+EP++++   i +a+        +p +s++v+GaG++GLL  a+ +a   g +++  ++ + +r++ +i++  +   t++  r +  ++ +    
   KHJ31357.1 155 GALIEPLAVAVHIIKQAR-------LKPgQSVVVMGAGPIGLLCCAVAKA--FGASKIVSVDiQSSRTEFAIQF--SATHTFIPDRVSAEENAARiie 241
                  678888888665555543.......3342799************888875..6777777777334444444443..3445666555444333333000 PP

  Glu_dehyd_C  97 ...aseemdlvvEaTGsakhafeaiealapnGvaaLlGvpedsevevdggelhrelvleNkalvGsvNanrrhfeaavdtLaalpeslldelvtkvvd 191
                       +  d+v++a G+ + +  +++ ++  Gv +  G+ ++  +++ +      l ++   + Gs   +   ++ av+ +++ + + +++l+t+ v 
   KHJ31357.1 242 qavLGNGADVVIDASGAEPSIQTSLHIVRRGGVYVQGGMGKPD-INFPIL----ALCIKEVTVRGSFRYKGGDYKLAVELVSTGKVD-VKKLITNIVS 333
                  00045678*******************************9886.444443....3566778899**************977766555.79******** PP

  Glu_dehyd_C 192 ldeleeAfeddd 203
                  ++e+e+Af+d +
   KHJ31357.1 334 FHEAEQAFKDVK 345
                  ********9754 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0        10   1.8e+04      46      54 ..      76      85 ..      69      96 .. 0.69
   2 !   23.8   0.0   4.1e-08   7.3e-05      15     126 ..     237     348 ..     220     350 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 10
                  EEEEEE--.- CS
  ADH_zinc_N_2 46 gGrlvsig.g 54
                   G++vsig g
    KHJ31357.1 76 AGTIVSIGsG 85
                  5999999933 PP

  == domain 2  score: 23.8 bits;  conditional E-value: 4.1e-08
                   H....HHH-TT-EEEEEES-HHHHH.HHHHHHEEEEEEEEE--.--..S-EEE-CHHHCTTT-EEEE--GGG...-.-HHHHHHHHHHHHHHH..-- CS
  ADH_zinc_N_2  15 e....aatggegvDvvldtvggealleaslkvlpggGrlvsig.gpp.lsaallkpakkrkgrsvkyeflfsmkasaqadileelaalieeGk..lr 103
                   +    +a+ g+g Dvv+d+ g e  ++ sl++++ gG +v+ g g+p + + +l++    k+ +v+ +f       ++ d  +  ++l++ Gk  ++
    KHJ31357.1 237 AriieQAVLGNGADVVIDASGAEPSIQTSLHIVRRGGVYVQGGmGKPdINFPILALCI--KEVTVRGSFRY-----KGGD-YKLAVELVSTGKvdVK 325
                   24456667799**********88888*******7769999988654344444444433..33444444444.....4888.999*********6667 PP

                   --EEEEEEGGGHHHHHHHHHSS- CS
  ADH_zinc_N_2 104 pvvdrvfpleeaaeAhrylesgr 126
                     ++   +++ea +A++++++g+
    KHJ31357.1 326 KLITNIVSFHEAEQAFKDVKNGK 348
                   79999**************9996 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.2   2.6e-06    0.0047     129     171 ..     160     206 ..     133     264 .. 0.73

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 2.6e-06
                  ECHHHHHHCCSS-T...SEEEEES-SHHHHHHHHHHHHHT-E.EEEE CS
                  xxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxx.xxxx RF
  Pyr_redox_2 129 tldsaealklkllp...krivvvGgGyiGvElAaalaklgke.vtlv 171
                  +l+ a  + ++ +    +++vv G+G+iG+ ++a+++ +g+  ++ v
   KHJ31357.1 160 PLAVAVHIIKQARLkpgQSVVVMGAGPIGLLCCAVAKAFGASkIVSV 206
                  555554443333334789*********************88323333 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.6   5.5e-06    0.0099      30      93 ..     178     244 ..     155     262 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 5.5e-06
                  EEEEESTSHHHHHHHHHHHHTT-.EEEEEESSHHHHHHHHHTTTC..ECEEHCHHHHHHHHHHHH-S CS
  AlaDh_PNT_C  30 kvlviGgGvaGlqAiatakglga.kVtvlDvrparleqleslgak..fvevlksqeellaeavkead 93 
                   v+v+G+G  Gl   a+ak++ga k++ +D++++r e   ++ a+  f+  + s ee+ a+ +++a 
   KHJ31357.1 178 SVVVMGAGPIGLLCCAVAKAFGAsKIVSVDIQSSRTEFAIQFSAThtFIPDRVSAEENAARIIEQAV 244
                  69********************9568999******99998855551145446666666665555543 PP

>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.1e-05     0.038      11      96 ..     166     257 ..     164     309 .. 0.69

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.1e-05
                 HHHHHHT-S-TT-EEEECT-TTSHHHHHHCCT..T.-SEEEEEESSSS....HHH...TTEEEECS-CCCSSHHH.HHCHCHHHSSEEEEEE--S CS
        FtsJ  11 eidekfklfkpgktvvDlgaaPGgwsqvllqrl.gakgkvvavDlqpm....apl...pgvttiqgditdpetie.kikealserkvdlvvsDga 96 
                 +i ++ + +kpg+ vv  ga+P g   +++ +  ga +k+v+vD+q+     a +      t+i   +  +e++   i++a+ ++++d+v+   +
  KHJ31357.1 166 HIIKQAR-LKPGQSVVVMGAGPIGLLCCAVAKAfGA-SKIVSVDIQSSrtefA-IqfsATHTFIPDRVSAEENAArIIEQAVLGNGADVVIDASG 257
                 7888999.99************99999998776365.**********976641.23446666666666555555414556666788888775544 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   2.2e-05      0.04       1      49 [.     180     229 ..     180     249 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.2e-05
  Pyr_redox_3   1 iIiGaGPaGlaaaielkkagledylilEkg.nignsiyrypkemtfisps 49 
                  ++ GaGP+Gl +   +k +g ++++ ++ + + +++  ++ ++ tfi   
   KHJ31357.1 180 VVMGAGPIGLLCCAVAKAFGASKIVSVDIQsSRTEFAIQFSATHTFIPDR 229
                  689********************999999878888889999999999754 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   5.6e-05       0.1      36      73 ..     176     214 ..     166     230 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 5.6e-05
                   TSEEEEES-SHHHHHHHHHHHHTT-.EEEEESSSHHHHH CS
  2-Hacid_dh_C  36 gktvGiiGlGrIGqavakrlkafgm.kviaydrskkkee 73 
                   g+ v ++G+G IG     ++kafg+ k++ +d + +++e
    KHJ31357.1 176 GQSVVVMGAGPIGLLCCAVAKAFGAsKIVSVDIQSSRTE 214
                   799**********************89999999877655 PP

>> UDPG_MGDP_dh_N  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   6.4e-05      0.11       2      35 ..     178     212 ..     177     221 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 6.4e-05
                     EEEEE--STTHHHHHHHHHHCT.SEEEEE-S-HHH CS
  UDPG_MGDP_dh_N   2 kisviGlGYvGlvtaavlaeig.hevigvDideek 35 
                      ++v+G+G +Gl ++av  + g  +++ vDi++++
      KHJ31357.1 178 SVVVMGAGPIGLLCCAVAKAFGaSKIVSVDIQSSR 212
                     589***************9999899******9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2483.05
//
Query:       KHJ31358.1  [L=194]
Description: hypothetical protein EV44_g3799 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.2e-06   25.9   0.0    2.5e-05   24.5   0.0    1.7  1  RNase_H   RNase H
  ------ inclusion threshold ------
      0.076   12.8   0.0       0.12   12.2   0.0    1.3  1  RVT_3     Reverse transcriptase-like


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0   2.8e-09   2.5e-05       6     142 ..      39     179 ..      34     180 .. 0.65

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 2.8e-09
                 EEEEEEEECTTTCEEEEEEECTT..EEEE.EEECCCCHHHHHHHHHHHHHHHTT.SCSEEEEEES...-HHHHHHHHCCCHHHHHTTSSSETTSSBHTT CS
     RNase_H   6 vYtDGsclgnpgeggagavlykegarnis.apleeaqtnnraELsAvieaLkalksdekvniytD...SkYvvkgitqwvhrwkknawkttseqkpvkn 100
                 + tDGs l n ++gg  a+++ + + ni  +pl+       +E  A+   ++++ s ++     D   S   ++ + +++ + +  + +tts +  + +
  KHJ31358.1  39 LDTDGSRLVNGNSGGGSAIFQIGRQINIDaFPLRVNIEPFDTEVLAALRGIQTAVSLPTTRFARDlwgSVDNIEVARKILTKSSSISSQTTSFD-ILGA 136
                 5689999999888866666654422344436666555556677777777777555555555555522233335555555555555555555555.3556 PP

                 HHHHHHHHHCHC..SSEEEEEE-SCCSSSTHHHHHHHHHHHHHH CS
     RNase_H 101 kdlaellkelak..kkkvqlkwvkgHaGvpkgNemaDrlAkeaa 142
                  +++++ +++ +  + +++  wv+g +G+ k+Ne aD+l k++a
  KHJ31358.1 137 SQTWKACTRFPHiqEGHIKRGWVPGYSGI-KENELADKLGKQGA 179
                 999*9999876543888************.8**********998 PP

>> RVT_3  Reverse transcriptase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.3e-05      0.12      34     111 ..      71     156 ..      40     160 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.3e-05
       RVT_3  34 lqgkasveeAElqALlrGLqlalkl....girrlvvegDsktvvqllngrekvksselanl....ldeirkllksfesvsvehipR 111
                 l+ +++++  E++A lrG+q+a++l      r l+  +D+ +v++++  +++  ss++  +     ++ +k +++f  ++  hi+R
  KHJ31358.1  71 LRVNIEPFDTEVLAALRGIQTAVSLpttrFARDLWGSVDNIEVARKILTKSSSISSQTTSFdilgASQTWKACTRFPHIQEGHIKR 156
                 666788899999999999999998722225677*************9999986666655443333678888888999999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1424.89
//
Query:       KHJ31359.1  [L=116]
Description: hypothetical protein EV44_g1788 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0058   17.0   0.2       0.01   16.3   0.2    1.4  1  IATP      Mitochondrial ATPase inhibitor, IATP
  ------ inclusion threshold ------
      0.029   14.7   0.4      0.029   14.7   0.4    1.6  2  DUF3646   DNA polymerase III gamma and tau subunits C termina
      0.064   13.7   0.2       0.12   12.8   0.2    1.4  1  DUF5428   Family of unknown function (DUF5428)
       0.47   10.7   8.2       0.57   10.4   8.2    1.1  1  PNISR     Arginine/serine-rich protein PNISR


Domain annotation for each model (and alignments):
>> IATP  Mitochondrial ATPase inhibitor, IATP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.2   2.2e-06      0.01      46      89 ..      36      80 ..      26      86 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.2e-06
        IATP 46 reagdafgkrEaAsEeey.irqrekekLaeLkeklaeqkeHleel 89
                + +  a+ k E+A+Ee + irq+++e+ ++ + +l+  ++ + ++
  KHJ31359.1 36 ETRKAAWIKAEQAKEERArIRQMDRERFLNYQARLKSAEKREWDI 80
                556789********99765***************99987766555 PP

>> DUF3646  DNA polymerase III gamma and tau subunits C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.38   1.7e+03      79      92 ..      44      57 ..      33      66 .. 0.52
   2 ?   14.7   0.4   6.4e-06     0.029      53      87 ..      66     100 ..      55     105 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.38
     DUF3646 79 aeqeeaaeearrae 92
                + +++++e+ar ++
  KHJ31359.1 44 KAEQAKEERARIRQ 57
                33333333333333 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 6.4e-06
     DUF3646  53 LarlLkewtgrrWkVslskeegepTlaeqeeaaee 87 
                  +++Lk + +r+W +++ +e+g++Tl+++ +++e 
  KHJ31359.1  66 YQARLKSAEKREWDIKADSEPGRETLRKALREEES 100
                 5899***********************99888775 PP

>> DUF5428  Family of unknown function (DUF5428)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   2.7e-05      0.12       5      42 ..      44      84 ..      41      87 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.7e-05
     DUF5428  5 RSddsreektrskreegk...sakevsksAVrrEgDvKkdl 42
                ++++ +ee++r ++ +++    ++   ksA +rE D+K d 
  KHJ31359.1 44 KAEQAKEERARIRQMDRErflNYQARLKSAEKREWDIKADS 84
                579999*******99997444689999***********996 PP

>> PNISR  Arginine/serine-rich protein PNISR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   8.2   0.00013      0.57       2      68 ..      33      97 ..      32     106 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00013
       PNISR  2 lDaekrkaLPAWireGLEKmerEKqkklererrekeraerrkeekkesskeeeeaknprnlakskfd 68
                +Dae rka  AWi+ +  K er + ++++rer  + +a  +++ek e +++ +++ ++++l+k+  +
  KHJ31359.1 33 VDAETRKA--AWIKAEQAKEERARIRQMDRERFLNYQARLKSAEKREWDIKADSEPGRETLRKALRE 97
                58888888..***********************8888888888888888888888888877776554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       795  (0.0443416); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 852.80
//
Query:       KHJ31360.1  [L=295]
Description: putative tricarboxylate transport protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-49  166.2   2.4    1.8e-20   72.7   0.2    3.8  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.9   0.0   3.5e-14   6.3e-10       4      95 ..      12      93 ..       9      95 .. 0.94
   2 !   51.7   0.0   3.3e-18     6e-14       4      93 ..      99     188 ..      96     191 .. 0.91
   3 !   72.7   0.2   9.9e-25   1.8e-20       3      95 ..     198     287 ..     196     289 .. 0.93

  Alignments for each domain:
  == domain 1  score: 38.9 bits;  conditional E-value: 3.5e-14
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr  4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95
                ++l+++laG++aga++  +t+P +++Ktr+q++++ + ++k    +  ++ki+        y G++  +++++ +++++fv+++++k ll++
  KHJ31360.1 12 TPLRSILAGSTAGAIEIAITYPAEFAKTRIQLNRRLKDSAKL--PWPPFGKIW--------YAGCTTLIIGNSLKAGIRFVAFDQYKALLQD 93
                57899*******************************998776..9*******9........***************************9986 PP

  == domain 2  score: 51.7 bits;  conditional E-value: 3.3e-18
                 HHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   4 svlkellaGglagav.atlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 s +++++aG  ag++ + l++tP++ +Kt l  ++k+ + + ++ +ld++  i +e G++g+++G++p+  r++ +sa+++++y +l++l 
  KHJ31360.1  99 SGARTVMAGFGAGVTeSLLAVTPFESIKTTLIDDRKNPRPRMRG-FLDAVPIIARERGISGFFQGFVPTTARQSANSAVRLGSYAFLRQLA 188
                 567899*********566789****************9987665.****************************************999875 PP

  == domain 3  score: 72.7 bits;  conditional E-value: 9.9e-25
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 +++ +++++Gg+ag +++++t+Pld++Ktr+q  + ++ +++    +++   i ++eG++ +++G++p+l r + + ++ f++ye+ ++l+ k
  KHJ31360.1 198 IGASSTFIIGGIAGFITVFATQPLDTIKTRMQGIEAKTMYKN---SFSCAALIARKEGFLTFWSGAMPRLARLILSGGIVFTIYEKSIELMEK 287
                 677889***************************999988876...8*****************************************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       313  (0.0174578); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2133.00
//
Query:       KHJ31361.1  [L=594]
Description: putative transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.2e-28   98.2   1.1    9.8e-28   96.6   1.1    1.9  1  HSF_DNA-bind  HSF-type DNA-binding
    8.5e-22   77.4   0.1      2e-21   76.3   0.1    1.6  1  Response_reg  Response regulator receiver domain
  ------ inclusion threshold ------
      0.073   12.9   0.1       0.13   12.1   0.1    1.4  1  ATP-synt_D    ATP synthase subunit D
       0.12   12.8   0.1       0.34   11.4   0.1    1.8  1  Ets           Ets-domain
       0.68   10.1   3.5        1.5    9.0   0.1    2.5  2  Swi5          Swi5
        1.8    9.1   4.4         72    4.0   0.0    3.4  3  PCI           PCI domain


Domain annotation for each model (and alignments):
>> HSF_DNA-bind  HSF-type DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.6   1.1   3.3e-31   9.8e-28       8      96 .]       1      95 [.       1      95 [. 0.89

  Alignments for each domain:
  == domain 1  score: 96.6 bits;  conditional E-value: 3.3e-31
                  HHCT...TTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSB...TTB--TTSEEEEESS--XXXXXXXXXXXXX CS
  HSF_DNA-bind  8 lled...eelisWsedgksfvvkdkeefakevlpkyfkhsnfssFvrqLnlYgFrkvkrkee...kkkkkskvweFshenFkrgkpelLkkikrk 96
                  +led   +e+++W++ g+sfvv ++e+f+k+vlpk+fkhsnf+sFvrqLn Y+F+kv+ +++    +    + weF+h++F+++k++lL++ikrk
    KHJ31361.1  1 MLEDstyKEIVRWTDGGESFVVLENEKFTKTVLPKHFKHSNFASFVRQLNKYDFHKVRLNSDenaPSPYGPNAWEFKHPEFQEHKKDLLDNIKRK 95
                  6666666899**********************************************76544444567778899*********************7 PP

>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.3   0.1   6.5e-25     2e-21       1     111 [.     332     443 ..     332     444 .. 0.97

  Alignments for each domain:
  == domain 1  score: 76.3 bits;  conditional E-value: 6.5e-25
                   EEEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHH..ESEEEEESSCSSSEHHHHHHHHHHCTTTSEEEEEESSTSHHHHHHHHHCTES CS
  Response_reg   1 vlivdDdplvrellrqlleeegyeevaeaedgkealellkeek..vdlillDinmpgmdGlellkeireedpelpviiltahseeedavealkagad 95 
                   +l+v+Dd++ +++ +++l+  ++  v++a+dg +a+  +++    +dlil+Di mp++dG+ ++  i++ +p++p+i++t++   +d++ +++ g+d
    KHJ31361.1 332 ILLVEDDKVCARIGTKFLRAFDC-GVETASDGLQAVSRINNGPitFDLILMDIIMPHLDGVSATVCIKDLHPHIPIIAMTSNIRADDIHMYFSHGMD 427
                   89*********************.***************999888**************************************************** PP

                   EEEESSG-HHHHHHHH CS
  Response_reg  96 dflsKpfdpeeLlkal 111
                   d+l Kpf++e +l al
    KHJ31361.1 428 DVLPKPFTKEGMLRAL 443
                   *******999888776 PP

>> ATP-synt_D  ATP synthase subunit D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   4.4e-05      0.13     105     158 ..     114     167 ..      72     169 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4.4e-05
                 .SSTSSSSSSSSTCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ATP-synt_D 105 sdstelygllrtgaqldeavealrellellvelasletslelLdeeikktnrRv 158
                 + +  +  l++++++++++ e+++el++  ++l +   +l++L+   +++ rRv
  KHJ31361.1 114 QVDLLNSQLVASQQHIKKLSESYNELAQSQMKLMQHVVQLQRLAWSHEQVMRRV 167
                 445566778999*****************************************9 PP

>> Ets  Ets-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00011      0.34       9      62 ..       1      52 [.       1      60 [. 0.79

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00011
         Ets  9 lLedpskssiiaWtdkeegeFklvdpeevarlWgkrknkpkmnyeklsralRyy 62
                +Led+++++i++Wtd+ + +F ++++e++++     k  ++ n+ ++ r+l +y
  KHJ31361.1  1 MLEDSTYKEIVRWTDG-GESFVVLENEKFTKTV-LPKHFKHSNFASFVRQLNKY 52
                699***********99.9**********99873.44555666777777777554 PP

>> Swi5  Swi5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.1   0.00049       1.5      31      64 ..     120     154 ..      83     166 .. 0.76
   2 ?    1.0   0.5      0.16   4.7e+02      16      48 ..     205     237 ..     195     238 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00049
                 .HHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHC CS
        Swi5  31 dpeetvkrhIklLhe.YNEiKDvgqgLigliAear 64 
                       ++hIk+L e YNE+    ++L++ + + +
  KHJ31361.1 120 SQLVASQQHIKKLSEsYNELAQSQMKLMQHVVQLQ 154
                 44556788999997669999888888888876655 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.16
                 HHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHH CS
        Swi5  16 ekelaelkeelkekkdpeetvkrhIklLheYNE 48 
                  +e +el     +k+ p+++++++ + Lh++N+
  KHJ31361.1 205 LQEANELLRDFSAKNLPDKELESKKNNLHQRND 237
                 334444444444445699999999999****98 PP

>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.024        72       6      49 ..      33      95 ..      29      96 .. 0.82
   2 ?    0.7   0.3      0.26   7.6e+02      15      49 ..     129     160 ..     113     174 .. 0.67
   3 ?    3.6   0.1     0.031        94       7      44 ..     197     234 ..     195     236 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.024
                HHHHHHHTSHHHHHHHHHHH...................HHHHHHHTTHHHHHHHHHHHHHHH CS
         PCI  6 llkalrsgnlsgfseelkdl...................eeelladdglaqllesLekkvrer 49
                l k+++ +n+++f + l+++                    +  +++++ +++ ++L ++++++
  KHJ31361.1 33 LPKHFKHSNFASFVRQLNKYdfhkvrlnsdenapspygpNAWEFKHPEFQEHKKDLLDNIKRK 95
                6699****************9988888888888888887556677788888999999999876 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.26
                 HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH CS
         PCI  15 lsgfseelkdleeelladdglaqllesLekkvrer 49 
                 +++ se+ ++l      +++l q++ +L++ ++ +
  KHJ31361.1 129 IKKLSESYNEL---AQSQMKLMQHVVQLQRLAWSH 160
                 45555555555...334456777888888877754 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.031
                 HHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH CS
         PCI   7 lkalrsgnlsgfseelkdleeelladdglaqllesLek 44 
                 +++ +s++l++++e+l+d++++ l+d++l+   + L++
  KHJ31361.1 197 INDNVSSSLQEANELLRDFSAKNLPDKELESKKNNLHQ 234
                 66778999*************99999999887777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (594 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1038  (0.057895); expected 358.6 (0.02)
Passed bias filter:                      614  (0.0342462); expected 358.6 (0.02)
Passed Vit filter:                        81  (0.00451782); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.41
# Mc/sec: 4320.91
//
Query:       KHJ31362.1  [L=530]
Description: putative tat pathway signal sequence protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-75  251.6   0.4    8.6e-75  251.0   0.4    1.3  1  HAD_SAK_1      HAD domain family 1 in Swiss Army Knife RNA re


Domain annotation for each model (and alignments):
>> HAD_SAK_1  HAD domain family 1 in Swiss Army Knife RNA repair proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  251.0   0.4   4.8e-79   8.6e-75       1     202 [.      50     252 ..      50     253 .. 0.98

  Alignments for each domain:
  == domain 1  score: 251.0 bits;  conditional E-value: 4.8e-79
   HAD_SAK_1   1 SPlpnpqlwtkeligllqseevlknggWwsdpriLeesvkeslkaatgegv....erawegwWnekivelarlsikdkdtltvlLTGRkekkFselier 95 
                 SPlpn +lw+++ ig+lqs++++ +ggWw+d+riL         aatgeg+    +raw+gwWnekivel++ls+++kd+ltvlLTGR+e++Fs li++
  KHJ31362.1  50 SPLPNTKLWNTPSIGFLQSQDTFLTGGWWHDQRIL---------AATGEGInkeeQRAWKGWWNEKIVELVELSMRQKDALTVLLTGRSETGFSILIKK 139
                 9**********************************.........677777777779******************************************* PP

   HAD_SAK_1  96 ileskklkfdavvLkkkvepsseefesTmeFKqafledlletyksleeitiYedrpkhvkkfkefleklnkkkk......pikaeviqvaelskyldpe 188
                 i++skkl+fd+++Lk+ v+p++e+f+sTm FK++fle l+etyk+++e++iYedr+kh+k+f++f++++nk++        i+ae+iqva++ ++l p+
  KHJ31362.1 140 IVRSKKLDFDMICLKPIVGPNNERFASTMIFKKTFLECLVETYKKANELSIYEDRVKHTKAFRDFFSEYNKTQLikptrgAITAEIIQVADRPTQLTPV 238
                 ***********************************************************************999*****999***************** PP

   HAD_SAK_1 189 kEvklvqelinehn 202
                  E+ +vq+lin+hn
  KHJ31362.1 239 SEIVEVQRLINDHN 252
                 *************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:01.21
# Mc/sec: 1322.01
//
Query:       KHJ31363.1  [L=123]
Description: hypothetical protein EV44_g1584 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 893.70
//
Query:       KHJ31364.1  [L=343]
Description: putative metal homeostatis protein bsd2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.1e-91  303.7   0.0    1.2e-90  303.1   0.0    1.3  1  DUF2370   Protein of unknown function (DUF2370)


Domain annotation for each model (and alignments):
>> DUF2370  Protein of unknown function (DUF2370)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  303.1   0.0   6.9e-95   1.2e-90       4     226 .]     112     326 ..     109     326 .. 0.89

  Alignments for each domain:
  == domain 1  score: 303.1 bits;  conditional E-value: 6.9e-95
     DUF2370   4 nssgrvvgkgagndGVFaNlsAkPdreeeeekeekpPtYeeAaaDaaPpYwettvlapsles.devlvdGlpvGnlfsfvwNllvsvsFqlvGFlltYl 101
                 +++grv+g+g+g+dGVFaNlsAkP+++e  + ee+pPtYe+AaaD+aPpYwett+lap+l   dev+++GlpvG++fsfvwN ++s+sFqlvGFlltYl
  KHJ31364.1 112 RTTGRVYGGGSGSDGVFANLSAKPESSE--KLEEHPPTYEQAAADSAPPYWETTILAPGLGGpDEVYIEGLPVGSIFSFVWNGMISMSFQLVGFLLTYL 208
                 5789*********************888..68****************************988************************************ PP

     DUF2370 102 LHtthAakqGSraGLGitliqygfslrssaee..skvkkekeegrvepsdpnshdldkekvaekgekeeaaalsdlelaeeeknkesssewlayvlmil 198
                 LHtthAak+GSraGLGitl+qygf+++ s  +  ++  +e ++++ ep+dpn+h++d+ek ++ g ++ +++         + n+  ssew+ay+lmi+
  KHJ31364.1 209 LHTTHAAKNGSRAGLGITLVQYGFYMKGSGRSatNSPVDEISTQYEEPPDPNTHNFDPEKLNSPGIESGDSK---------SWNNVASSEWMAYILMIV 298
                 ***************************998874344445566678899************976554333322.........1234589*********** PP

     DUF2370 199 Glfiliksvvdylrvkrlekkvlasedr 226
                 G+f+li+++ dyl+++r+e++vl+s++r
  KHJ31364.1 299 GWFVLIRAICDYLKARRHEQLVLQSPER 326
                 ************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2736.10
//
Query:       KHJ31365.1  [L=401]
Description: putative solute carrier family 25 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.4e-45  150.6   0.9    7.1e-18   64.3   0.1    4.0  3  Mito_carr       Mitochondrial carrier protein
     0.0087   15.4   0.1        2.2    7.5   0.0    2.4  2  Heliorhodopsin  Heliorhodopsin


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   2.7e-09   2.5e-05       9      96 ..       3     120 ..       1     121 [. 0.67
   2 !   57.2   0.0   1.3e-19   1.2e-15       5      93 ..     154     265 ..     150     268 .. 0.88
   3 !   64.3   0.1     8e-22   7.1e-18       2      96 ..     293     399 ..     292     400 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 2.7e-09
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS.............................HHHHHHHHHHHHHHHG..GGTTHHHHHHHHH CS
   Mito_carr   9 llaGglagavatlvttPldvvKtrlqtqkksskksksaa.............................ildvlkkiykeeGlrg..lyrGllpnllrva 76 
                 + aG+++ga++ ++ +Pld++K++lq+ k+++++ + ++                             +    kki +++  +     +G+ + +l++ 
  KHJ31365.1   3 FWAGLVSGAAGIIIGNPLDIIKVQLQIRKDNHHNIGCSScnkklnattssfallhqvggqqyqnpriqF-WSSKKISRNDYRKNnvWLSGIAAPILGYG 100
                 789************************665554443333444444444555555555555544455532.34455555443332447789999999999 PP

                 HHHHHHHHHHHHHHHHHCTT CS
   Mito_carr  77 pasalkfvlyetlkrlllkk 96 
                   ++l f +y+ ++ ll++k
  KHJ31365.1 101 GLNGLLFITYNRFISLLNNK 120
                 99999999999999988875 PP

  == domain 2  score: 57.2 bits;  conditional E-value: 1.3e-19
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS.......................HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHH CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa.......................ildvlkkiykeeGlrglyrGllpnllrvapasa 80 
                 ++ +++aG+++g++++++ tP++++K+r q+++k++ ++++a                         +++ k+i+++eG+rgly G +++ lr ++  +
  KHJ31365.1 154 LWTTFVAGAVGGLATWIISTPTELIKCRAQAHAKTYINNNHATqtspsppphhhllqnnsstnnisSWKIAKSILRHEGIRGLYFGGVITALRDSIGYG 252
                 6899***************************888876666555677788888888888888888889******************************** PP

                 HHHHHHHHHHHHH CS
   Mito_carr  81 lkfvlyetlkrll 93 
                  +f++y+++   +
  KHJ31365.1 253 FYFWTYKFTTSSF 265
                 *******998766 PP

  == domain 3  score: 64.3 bits;  conditional E-value: 8e-22
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS............HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   2 elsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa............ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyet 88 
                 +++v+k l++Gg+ag+++++ ++Pld++Ktr+qtq   ++  k+++            +++++++ y +e  r +++G+++ ++r +  +a+++++ye 
  KHJ31365.1 293 DVEVIKMLICGGIAGIATWVSVFPLDLIKTRVQTQLPDYELLKKNKngnslkirgrmtAMQIFQSAYTNETSRVFFQGMGVCCVRAFLVNAVQWSIYEL 391
                 678999****************************655543333333345677888999***************************************** PP

                 HHHHHCTT CS
   Mito_carr  89 lkrlllkk 96 
                 + + ++++
  KHJ31365.1 392 IMQRFNDS 399
                 *9999875 PP

>> Heliorhodopsin  Heliorhodopsin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0   0.00025       2.2     145     168 ..     150     173 ..     128     191 .. 0.79
   2 !    5.4   0.0    0.0011       9.8     151     183 ..     298     331 ..     290     334 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00025
  Heliorhodopsin 145 tektnwlpfifGciagivpWivil 168
                     +++  w++f+ G + g+++Wi+ +
      KHJ31365.1 150 NDDLLWTTFVAGAVGGLATWIIST 173
                     34458****************976 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0011
  Heliorhodopsin 151 lpfifGciagivpWivil.lyllaaeseeevPaF 183
                     +  i+G iagi++W+ ++ l l++++ ++++P++
      KHJ31365.1 298 KMLICGGIAGIATWVSVFpLDLIKTRVQTQLPDY 331
                     56799**********9883566666888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1025  (0.0571699); expected 358.6 (0.02)
Passed bias filter:                      623  (0.0347482); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.37
# Mc/sec: 3234.17
//
Query:       KHJ31366.1  [L=121]
Description: putative duf167 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-14   53.8   0.1    2.2e-14   53.3   0.1    1.2  1  DUF167    Uncharacterised ACR, YggU family COG1872
  ------ inclusion threshold ------
       0.12   12.7   0.1         24    5.3   0.1    2.3  2  DUF5487   Family of unknown function (DUF5487)


Domain annotation for each model (and alignments):
>> DUF167  Uncharacterised ACR, YggU family COG1872
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.3   0.1   2.4e-18   2.2e-14       2      77 .]      23      96 ..      22      96 .. 0.91

  Alignments for each domain:
  == domain 1  score: 53.3 bits;  conditional E-value: 2.4e-18
                EEEEEES---SSS----...--TTTT-------TTIIIIIHHHHHHHHHHHHHS...SEEEE-S-GGGSEEEEEEE CS
      DUF167  2 vilavrvkPgakkdaigleedaegrealkvrvaappvdGkANkalikfLakalgvpksdveivsGeksreKvvrie 77
                + l++++k g +  + g    ++ ++++ + v+a+p+ ++ANka+ +++++ l+ p+sdvei++G+ks+ K+v+i+
  KHJ31366.1 23 IYLNCYIKTGVSAARHG--ILSVMTSHVSIGVSAKPRHNQANKAVGEIISQSLSWPRSDVEIIKGHKSQLKTVAIK 96
                67899999998888888..45677899**********************************************995 PP

>> DUF5487  Family of unknown function (DUF5487)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.1    0.0027        24      27      44 ..      17      34 ..       9      38 .. 0.80
   2 ?    5.2   0.0    0.0028        25      40      55 ..      95     110 ..      90     118 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0027
     DUF5487 27 srfvGiiyvtsktaqGvv 44
                  fvG iy+ +    Gv 
  KHJ31366.1 17 RGFVGCIYLNCYIKTGVS 34
                349********9999985 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0028
     DUF5487  40 aqGvvmyaeldeyfld 55 
                  +Gvv+  e dey++ 
  KHJ31366.1  95 IKGVVINGEEDEYLAK 110
                 58***********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 911.94
//
Query:       KHJ31367.1  [L=461]
Description: putative trna (guanine-n -)-methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-67  226.8   0.0    2.7e-67  226.4   0.0    1.2  1  Met_10    Met-10+ like-protein
  ------ inclusion threshold ------
      0.084   12.0   0.0       0.14   11.3   0.0    1.3  1  TRM       N2,N2-dimethylguanosine tRNA methyltransferase


Domain annotation for each model (and alignments):
>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.4   0.0     3e-71   2.7e-67       2     199 .]     138     389 ..     137     389 .. 0.97

  Alignments for each domain:
  == domain 1  score: 226.4 bits;  conditional E-value: 3e-71
                 EEEEETTEEEEEB-TTSSHHHHHHHHHHHHHS.S-SCEEEE-S-S..BTTTTB--EEEEEES-.SEEEEEETTEEEEEETTTS---GGGHHHHHHHHTT CS
      Met_10   2 kfeiiGdvvilnlreelkeykkvigevildkt.kvktvlrkvsev..egefRtfelevlaGsdstetihkEngcrfklDvskvyfsskleaErerlakl 97 
                 +f+i+G++++lnlr+e+  +kk+i+ev++dk+ ++ktv++k + v  e+efRtf++evlaG+d+++++  E gc+fk+D+s+vy++s+l++E++rl+  
  KHJ31367.1 138 GFAIVGQIAHLNLRDEYLSFKKLIAEVLIDKNpQIKTVINKIQDVgeESEFRTFKYEVLAGPDDMKVELSEGGCNFKFDYSQVYWNSRLQTEHKRLIDA 236
                 79*******************************************999*************************************************** PP

                 --TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-EE.......................... CS
      Met_10  98 veegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqlad.......................... 170
                 +++ge+V+dv+AGiGpfa+p+++  k+++v+a+dlnPe +k l e i +Nkv++ v+p+++Dgr +ir+++ +                          
  KHJ31367.1 237 FNPGEMVLDVMAGIGPFALPAGR--KKVFVWANDLNPECYKCLAEGIVRNKVHNFVRPFNKDGRIFIRHSVKEllqlassnenlvlqpprqrdkhsssl 333
                 ***********************..*******************************************88888999*********************** PP

                 ............EEEE--TTTGGGGHHH...HHHHEEEE............EEEEE CS
      Met_10 171 ............rvvmnlpksaieFldk...vlaalkdg............gvihy 199
                             ++vmnlp+ aieF d+   +++ + +             +v+++
  KHJ31367.1 334 kkqimplplvpsHFVMNLPAIAIEFCDSfsgLYSGHDKLfepfsdrllpmvHVHCF 389
                 ***************************98877777777788888889999999987 PP

>> TRM  N2,N2-dimethylguanosine tRNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.5e-05      0.14      74     116 ..     261     303 ..     226     310 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.5e-05
                 EEEEEEE-S-HHHHHHHHHHHHHTT--GGEEEE-S-HHHHHC- CS
         TRM  74 vkevlaNDisekAvelikeNvklneveeivvineddAnvllae 116
                 +  v+aND++++ ++++ e +  n+v++ v + ++d ++++++
  KHJ31367.1 261 KVFVWANDLNPECYKCLAEGIVRNKVHNFVRPFNKDGRIFIRH 303
                 45799***************************999***99974 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.21s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 3610.31
//
Query:       KHJ31368.1  [L=860]
Description: putative exocyst complex component sec10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   2.3e-206  687.5  12.4   2.8e-206  687.2  12.4    1.1  1  Sec10        Exocyst complex component Sec10
  ------ inclusion threshold ------
      0.052   14.0   3.5       0.21   12.1   0.4    3.5  3  GlutR_dimer  Glutamyl-tRNAGlu reductase, dimerisation domain
      0.078   13.4   0.5         17    5.9   0.1    2.8  2  UPF0184      Uncharacterised protein family (UPF0184)
       0.13   12.4   1.2        0.8    9.9   0.1    2.8  3  Ku_PK_bind   Ku C terminal domain like


Domain annotation for each model (and alignments):
>> Sec10  Exocyst complex component Sec10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  687.2  12.4  6.2e-210  2.8e-206       1     705 [.     117     851 ..     117     856 .. 0.97

  Alignments for each domain:
  == domain 1  score: 687.2 bits;  conditional E-value: 6.2e-210
       Sec10   1 lqevvdsfnqLddkise..............vgqtavklgeqLesadkqrqraseaaeLiefykeflssgetsklellfkkskdpekklkaAqiarkLl 85 
                 l++ +d+f++Ld ++++               g  avk+ge+Le + kqr ra++a +Li+++ e++++g++++le++ +++++ e+kl++A+iar+L+
  KHJ31368.1 117 LDQSIDNFDSLDVSVNNsdepayydltekfgGGSVAVKIGERLEDLVKQRTRALDAGFLIQCWLEVSEAGQLQSLEDMIERQGSGENKLRCAVIARQLM 215
                 5799*********************************************************************************************** PP

       Sec10  86 aiskeld....................elekaentrekiekyaerlEkelLkeFdkayrkedfermkeiAkvLqefnggasvvqlfvnqhdffidkdkl 164
                 ++s+ ld                          +tre iek++e+lEk lLk+Fd++yrk+++++m e+Akv+++fngg+s+v+lfvnqh+ffidk+++
  KHJ31368.1 216 KMSQALDsaswpqkdksfnkngvsiekGGSPKYKTREIIEKFSETLEKGLLKQFDDSYRKQNYDEMLECAKVMHDFNGGSSIVALFVNQHQFFIDKSQM 314
                 ************************97633334589**************************************************************** PP

       Sec10 165 ..deangiesseiwekladpdeapskveeslqalfseiretvkeeaeiikrVFpnpekVmqtFlqrvfaqviqqrlealLdkassisqlayLraLhsly 261
                   +e +  ++++iw+k+adpd++p+ ve+slq l++eir ++++e+  i+r+Fp++e+V+ +F+qr+f+q+iqqrle +L ka +is+la+Lr+Lh+++
  KHJ31368.1 315 itEELT--TDKKIWDKIADPDSEPPGVEPSLQILIDEIRIVMQNESFAIRRAFPYYEVVLAKFIQRIFQQSIQQRLEIILGKADEISSLAFLRSLHASR 411
                 644444..567**************************************************************************************** PP

       Sec10 262 sstlkLvkdLkeylsteeidgssa.lsalLdqsveelFvpylegdsYlerEkksLeelyaellskFttlheqsasakslknkvkkklatsfkasls..a 357
                 +++++L++dLk+++ te+++ +s  ++ +Ldq++eelFvpyl+g+ Y+erE+ksL el ++ll+k+t +h++           +kk a+ f+asl   +
  KHJ31368.1 412 NYISNLIEDLKTHGLTEHPEPCSGqTAFILDQQLEELFVPYLVGNLYIERERKSLMELKSSLLFKYTIYHSR-----------RKKGAAGFMASLAqqG 499
                 ************************9999********************************************...........*************999 PP

       Sec10 358 sklaassktkqinraasstlskskkr.....aelketaatsakaaknedeleeedsllslevaesllkwaaeslgRaveLsspsevpkaveallelLls 451
                 s+l +s+k+++i r++ss+l++++k      a+l++t +t+   +kne+e+++ed+ ls+ +a+++lkw aes++Ra+eL +++e++++++ ll++Ll 
  KHJ31368.1 500 SQLLSSAKDAYIDRLNSSELTPTQKAmmlkvADLRDTESTK---NKNEIEVSDEDGALSIHIAKRMLKWMAESVRRALELGNSNETSRDISVLLNILLT 595
                 9*************************997777777776666...9****************************************************** PP

       Sec10 452 algkeYvetaLdaalaaltaqeiaektevpdlsflevvrsvdliisllqvyiktillpllsdspdirremvkeknsflsrlEekvnaglqktidvvvge 550
                  +g+ Y+et Lda+++++++qe   k e pdl +l+ ++s+ +i+++++++i+t+l+pl++++ +irr+m ++++ +++r+Eek+ ++++ t+ v + +
  KHJ31368.1 596 NIGQVYIETSLDAIADQANSQE-TSKVE-PDLAYLTQLQSAITITNIISHFINTALIPLAESNATIRRSMETQTKIAIERIEEKISNIIKSTLTVAIHW 692
                 **********************.77777.********************************************************************** PP

       Sec10 551 veyllskqkknDFrpknddlamerqpTeaCkeivefLssvhsalkeslsgsnlesflteiGlrlhklLleHlkkftvsseGGlmltkDlneYqdavksf 649
                 v++ll++qk++DFrpk+ dl+ e  +T +C +i++fL+++ + + ++++g+nle+f + ++l++++l++eH+kkf+v+++GGl +t+D+ +Y +++k f
  KHJ31368.1 693 VTRLLANQKRTDFRPKDTDLV-ETLQTVTCLSISTFLTRLSQIITQTINGNNLEVFSSTLALNIRDLIFEHFKKFQVNATGGLFVTQDISKYISTLKCF 790
                 ***************999988.79*************************************************************************** PP

       Sec10 650 .kipelsekFelLrelgnlfiVqpevlkslvregal....akldrelireyiqrReDykke 705
                    +e     e+L e+gn fi  pe+l++  r+ +     +kl++ + r+++ +R+D+ ++
  KHJ31368.1 791 pLSNEAASSIEVLSEIGNFFILGPEALREKSRNLQPssggKKLQKADFRAFVLKRDDSGSV 851
                 76788999*************************9999999*****************9766 PP

>> GlutR_dimer  Glutamyl-tRNAGlu reductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.71   3.2e+03      53      88 ..     249     285 ..     242     291 .. 0.69
   2 ?   12.1   0.4   4.6e-05      0.21       9      81 ..     506     576 ..     500     593 .. 0.78
   3 ?   -1.0   0.1      0.53   2.4e+03      37      76 ..     667     696 ..     626     719 .. 0.60

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.71
                  ------TTHHHHHHHHHHHHHHHHHHSS-TTTT.HHH CS
  GlutR_dimer  53 edreelekltrslvnkllheptarLkeaedeee.ell 88 
                  ++re +ek++++l + ll+++  + ++++ +e  e++
   KHJ31368.1 249 KTREIIEKFSETLEKGLLKQFDDSYRKQNYDEMlECA 285
                  6778899999999999999888888777322223444 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 4.6e-05
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-S..--------TTHHHHHHHHHHHHHHHHHHSS..- CS
  GlutR_dimer   9 eveefeawlkslevvptIkalrekaeeireeeleralkklaldgedreelekltrslvnkllheptarLkea..e 81 
                  + +++ + l+s e++pt ka+  k+ ++r+ e ++ ++++++++ed +    l+ ++ +++l+ + +++++a   
   KHJ31368.1 506 AKDAYIDRLNSSELTPTQKAMMLKVADLRDTESTKNKNEIEVSDEDGA----LSIHIAKRMLKWMAESVRRAleL 576
                  5688999*********************************98777755....77788888888888888877652 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.53
                  HHHHHHHHHS-S..--------TTHHHHHHHHHHHHHHHH CS
  GlutR_dimer  37 reeeleralkklaldgedreelekltrslvnkllheptar 76 
                   +  +er+ +k          + ++++s     +h  t+ 
   KHJ31368.1 667 TKIAIERIEEK----------ISNIIKSTLTVAIHWVTRL 696
                  22222332222..........4444444444444444443 PP

>> UPF0184  Uncharacterised protein family (UPF0184)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.1    0.0038        17      32      55 ..      75      98 ..      71     122 .. 0.84
   2 ?    4.7   0.0    0.0087        39      13      75 ..     603     668 ..     596     674 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0038
     UPF0184 32 nsmLDqinsaLDalEernDdlnsk 55
                 + L q+ s LD+lE r+ +l + 
  KHJ31368.1 75 ENALSQLASLLDELEGREAELLTS 98
                68999**********999888654 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0087
     UPF0184  13 edgaeteedefgeeEyeain...smLDqinsaLDalEernDdlnskLrELlesnRqiRlefaeqld 75 
                 e ++++  d+++++E   +      L q++sa+   +     +n+ L  L esn  iR+ ++ q +
  KHJ31368.1 603 ETSLDAIADQANSQETSKVEpdlAYLTQLQSAITITNIISHFINTALIPLAESNATIRRSMETQTK 668
                 667777788899999999983334578999999988888999******************999875 PP

>> Ku_PK_bind  Ku C terminal domain like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00018       0.8      17      56 ..     252     291 ..     246     332 .. 0.76
   2 ?   -0.6   0.1      0.32   1.4e+03       8      39 ..     657     687 ..     651     692 .. 0.77
   3 ?   -3.9   0.0       3.2   1.4e+04      25      36 ..     730     741 ..     724     764 .. 0.57

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00018
  Ku_PK_bind  17 dlvekavkqlksvIeqlvedslgdssydkaveclkalRee 56 
                 + +ek ++ l++   +  +ds+++++yd+++ec k++ + 
  KHJ31368.1 252 EIIEKFSETLEKGLLKQFDDSYRKQNYDEMLECAKVMHDF 291
                 56899999****************************9876 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.32
  Ku_PK_bind   8 kllaqkdeedlvekavkqlksvIeqlvedslg 39 
                 ++++++ e  + + a++++++ I ++++++l+
  KHJ31368.1 657 ATIRRSME-TQTKIAIERIEEKISNIIKSTLT 687
                 55666655.6888899********99998765 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 3.2
  Ku_PK_bind  25 qlksvIeqlved 36 
                 +l+++I+q+++ 
  KHJ31368.1 730 RLSQIITQTING 741
                 455555555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (860 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       650  (0.0362541); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.40
# Mc/sec: 6380.26
//
Query:       KHJ31369.1  [L=1279]
Description: putative peroxisome biogenesis factor 6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.9e-56  188.8   0.0    3.3e-42  144.0   0.0    2.6  2  AAA              ATPase family associated with various cellul
    1.5e-24   86.2   0.1    4.6e-24   84.6   0.1    1.9  1  PEX-1N           Peroxisome biogenesis factor 1, N-terminal
    1.6e-14   53.4   0.1    1.3e-07   31.2   0.0    2.7  2  AAA_lid_3        AAA+ lid domain
    6.1e-11   43.0   6.1    1.5e-05   25.4   0.0    4.5  5  AAA_16           AAA ATPase domain
    2.6e-07   30.5   0.0    0.00049   19.9   0.0    2.6  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    8.2e-07   29.6   0.3     0.0045   17.5   0.0    2.9  2  AAA_18           AAA domain
    9.1e-07   29.2   1.1       0.25   11.6   0.1    4.9  4  AAA_22           AAA domain
    2.1e-06   27.8   0.0      0.012   15.6   0.0    3.2  2  AAA_5            AAA domain (dynein-related subfamily)
    2.6e-06   27.7   0.0      0.078   13.1   0.0    2.5  2  AAA_2            AAA domain (Cdc48 subfamily)
    6.8e-06   26.1   0.0      0.023   14.8   0.0    2.8  2  AAA_14           AAA domain
    3.4e-05   23.8   1.0      0.017   15.0   0.1    3.5  3  NACHT            NACHT domain
     0.0001   22.9   0.5       0.14   12.7   0.0    3.2  3  ABC_tran         ABC transporter
    0.00012   21.3   0.0     0.0024   17.1   0.0    2.7  3  DUF815           Protein of unknown function (DUF815)
    0.00017   21.2   0.3        1.5    8.3   0.0    3.6  4  AAA_25           AAA domain
    0.00022   21.6   0.0        0.8   10.1   0.0    2.7  2  RNA_helicase     RNA helicase
    0.00058   19.2   0.0       0.33   10.2   0.0    2.5  2  Zeta_toxin       Zeta toxin
    0.00059   20.0   0.0       0.03   14.4   0.0    2.5  2  Sigma54_activ_2  Sigma-54 interaction domain
    0.00061   19.3   0.0      0.032   13.8   0.0    2.3  2  AAA_7            P-loop containing dynein motor region
    0.00067   19.8   0.2        1.6    8.9   0.0    2.9  2  AAA_33           AAA domain
     0.0015   18.3   0.0      0.094   12.4   0.0    2.6  2  Sigma54_activat  Sigma-54 interaction domain
     0.0017   18.6   0.3          1    9.6   0.0    3.3  3  AAA_28           AAA domain
     0.0021   18.0   0.1        2.7    8.0   0.0    3.1  3  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
     0.0034   16.8   0.1        1.7    7.9   0.0    2.5  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.005   16.1   0.0        3.6    6.7   0.0    2.5  2  TIP49            TIP49 P-loop domain
     0.0066   15.8   0.0        3.7    6.8   0.0    2.5  2  ATPase           KaiC
  ------ inclusion threshold ------
      0.013   15.3   0.3        4.5    7.0   0.0    2.6  2  AAA_24           AAA domain
      0.013   15.3   0.1        1.5    8.6   0.0    2.4  2  IstB_IS21        IstB-like ATP binding protein
      0.023   14.8   0.0        9.9    6.3   0.0    2.9  2  SKI              Shikimate kinase
      0.025   14.5   0.0        5.7    6.8   0.0    2.5  2  Rad17            Rad17 P-loop domain
      0.028   14.3   0.1       0.12   12.2   0.0    2.0  2  APS_kinase       Adenylylsulphate kinase
      0.031   14.0   0.0       0.31   10.8   0.0    2.3  2  AAA_29           P-loop containing region of AAA domain
      0.043   13.7   0.1        0.3   11.0   0.0    2.2  2  NTPase_1         NTPase
       0.06   13.8   1.7        2.2    8.7   0.0    3.0  2  AAA_17           AAA domain
      0.067   13.3   0.0        3.1    7.9   0.0    2.6  2  Torsin           Torsin
       0.16   11.4   2.3       0.35   10.3   0.0    2.4  3  KTI12            Chromatin associated protein KTI12
       0.19   11.6   0.1       0.54   10.1   0.0    1.8  1  CPT              Chloramphenicol phosphotransferase-like prot
       0.38   10.6   4.6       0.92    9.4   0.0    2.9  2  ATPase_2         ATPase domain predominantly from Archaea


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.1   0.0   2.2e-13     1e-10       1     127 [.     600     739 ..     600     744 .. 0.86
   2 !  144.0   0.0   6.8e-45   3.3e-42       1     129 [.     936    1063 ..     936    1066 .. 0.97

  Alignments for each domain:
  == domain 1  score: 42.1 bits;  conditional E-value: 2.2e-13
                 EEEESSTTSSHHHHHHHHHHHHT....HEEEEEETTTCS.SS.STTHHHHHHHHHHHHHHHTS...TSEEEEEETGGGHHHHH...TTCCCHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelg....vefleisgsell.sk.yvgesekkirelfkeakeka...kpsilfiDEidalaksr...sgseseeeervvn 87 
                 vll+G  G GK+++ak +a+ l     +++  + + +++ ++  ++  +++++++f +a   a   ++s +++D+id+l++++   ++se++ ++++ +
  KHJ31369.1 600 VLLTGAQGSGKSSVAKVLAHRLResafFHVTYFPCQKVIkNEsRISTIKENFQQIFLSAAWGArlgGHSLVILDDIDKLCPTEtelETSENGRSRQISE 698
                 79*******************96555577777888888843346777788888888887766689888****************99999********** PP

                 HHHHHHHHTTTSSSTEEEEEEESSGGGSTHHHHS.TTSSEE CS
         AAA  88 qLlteldgvkkkeskvivigatnrpdkldpallr.gRfdrk 127
                  L   + ++ + +  v+++++t + ++l + +++ + f++ 
  KHJ31369.1 699 GLCIIIRKYCRLDTGVTLLAITETKESLHNVIISgHVFQET 739
                 ****************************9999876666665 PP

  == domain 2  score: 144.0 bits;  conditional E-value: 6.8e-45
                  EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTT CS
         AAA    1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvk 97  
                  +llyG pG+GKTlla+ va e+g +f++++g+e+l+ky+g+sek++r+lf++a++ + p++lf+DE+d++a++r ++++++++rvvnq+lt++dg +
  KHJ31369.1  936 ILLYGYPGCGKTLLASIVAGEFGLNFISVKGPEILNKYIGASEKSVRDLFERAQTAK-PCVLFFDEFDSIAPKRGHDSTGVTDRVVNQILTQMDGAE 1031
                  69***************************************************9997.****************999******************** PP

                  TSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEE CS
         AAA   98 kkeskvivigatnrpdkldpallr.gRfdrkie 129 
                    ++ v v++at rpd +dpallr gR+d+ i 
  KHJ31369.1 1032 GLTG-VYVLAATSRPDLIDPALLRpGRLDKSII 1063
                  *876.************************9986 PP

>> PEX-1N  Peroxisome biogenesis factor 1, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.6   0.1   9.4e-27   4.6e-24       1      77 []     173     265 ..     173     265 .. 0.98

  Alignments for each domain:
  == domain 1  score: 84.6 bits;  conditional E-value: 9.4e-27
      PEX-1N   1 ktVevePltsdDwEiielhaefleenlLsQvrav.............spgqvltvwlspttvakfkvtslep...atskfvkLspdteviVaP 77 
                 + +++eP+t +DwE+iel  +fle nl+sQ+ra+             sp+++lt+ lsp+++a++ vtsl+p   ++s+f+kL+p++e+iVaP
  KHJ31369.1 173 HAINIEPMTVEDWEMIELYTKFLELNLISQIRALpnpnfippnglkySPNHPLTLKLSPSSTANIIVTSLSPeppSSSPFAKLDPNAEIIVAP 265
                 689*******************************************************************99899*****************9 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   1.6e-06   0.00079       1      43 [.     821     874 ..     821     876 .. 0.85
   2 !   31.2   0.0   2.8e-10   1.3e-07       3      34 ..    1092    1123 ..    1091    1133 .. 0.89

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 1.6e-06
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcr....eAallAlrr.......gikeitmedf 43 
                 d+d+ +LA+ T+Gy   Dl+ l+     eA ++A+++       +i eit +df
  KHJ31369.1 821 DLDFLDLASDTDGYMPGDLVLLVTrargEAIIRAVSEtykggaqDIIEITRKDF 874
                 89**********************888888899999955555555779999999 PP

  == domain 2  score: 31.2 bits;  conditional E-value: 2.8e-10
   AAA_lid_3    3 dlkeLAerTeGySGADlaalcreAallAlrrg 34  
                  +l ++A+ TeGySGADl+al ++A l+A+ + 
  KHJ31369.1 1092 NLPKIAAHTEGYSGADLQALMYNAHLEAIHDL 1123
                  6789************************9865 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   3.1e-08   1.5e-05       2      63 ..     580     637 ..     579     667 .. 0.74
   2 ?   -0.6   0.0         3   1.5e+03     117     154 ..     649     685 ..     639     703 .. 0.71
   3 !   11.5   0.1    0.0006      0.29      24      44 ..     929     953 ..     916     974 .. 0.80
   4 ?    4.9   0.0     0.063        31     124     147 ..     982    1004 ..     975    1014 .. 0.85
   5 ?   -0.7   0.2       3.3   1.6e+03      90     127 ..    1219    1256 ..    1175    1263 .. 0.66

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 3.1e-08
      AAA_16   2 lvGReeeleqLlsalervrsgrpelvllsGesGvGKsslvrellralekdg.giflrgkcdql 63 
                 lvG ++ l+q+++ l  +     ++vll+G++G+GKss+++ l+++l+++  +++++  c++ 
  KHJ31369.1 580 LVGIDDLLDQIQNNLYHL-----SSVLLTGAQGSGKSSVAKVLAHRLRESAfFHVTYFPCQKV 637
                 666677788887777755.....79*************************6667799988888 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 3
      AAA_16 117 srllellkrllallsrderplvlvlDdlqwadeaslql 154
                 + + + + +++  ++ +++  +++lDd++++ ++  +l
  KHJ31369.1 649 ENFQQIFLSAAWGARLGGH-SLVILDDIDKLCPTETEL 685
                 6677777777766777677.999******986665555 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 0.0006
      AAA_16  24 p....elvllsGesGvGKsslvrel 44 
                 p    + +ll+G++G+GK+ l+  +
  KHJ31369.1 929 PlrlrSGILLYGYPGCGKTLLASIV 953
                 44445789************98655 PP

  == domain 4  score: 4.9 bits;  conditional E-value: 0.063
      AAA_16  124 krllallsrderplvlvlDdlqwa 147 
                  ++l++++++ ++p vl++D+++ +
  KHJ31369.1  982 RDLFERAQT-AKPCVLFFDEFDSI 1004
                  667789999.***********976 PP

  == domain 5  score: -0.7 bits;  conditional E-value: 3.3
      AAA_16   90 esaeleawrekleealaavpelagaeasrllellkrll 127 
                  e+ ++ +wr+  ++  +  ++++++e++rl++  +++l
  KHJ31369.1 1219 EQEAVIEWRHLAKSLSTTKASISADERNRLAAIYREFL 1256
                  22244445554444444888888999999999999999 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0    0.0057       2.7      32      60 ..     596     624 ..     586     655 .. 0.76
   2 !   19.9   0.0     1e-06   0.00049      36      70 ..     936     970 ..     931    1007 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0057
      RuvB_N  32 aldhvllyGpPGlGkttlakiiakelgvk 60 
                 +l  vll+G+ G Gk+++ak++a+ l  +
  KHJ31369.1 596 HLSSVLLTGAQGSGKSSVAKVLAHRLRES 624
                 56789******************998754 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 1e-06
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPvle 70 
                 +llyG PG Gkt la+i+a e+g ++ +  gP + 
  KHJ31369.1 936 ILLYGYPGCGKTLLASIVAGEFGLNFISVKGPEIL 970
                 8*******************************874 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   9.3e-06    0.0045       1      29 [.     600     635 ..     600     679 .. 0.64
   2 !    9.2   0.0    0.0036       1.7       1      31 [.     936     964 ..     936    1004 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 9.3e-06
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf......gvnlr 29 
                 +lltG++G+GK+++ak L+ rl ++       + ++
  KHJ31369.1 600 VLLTGAQGSGKSSVAKVLAHRLrESaffhvtYFPCQ 635
                 79****************999844444433333333 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0036
      AAA_18   1 IlltGtpGvGKttlakeLskrlgfgvnlrdv 31 
                 Ill G+pG+GKt la  ++ +   g n ++v
  KHJ31369.1 936 ILLYGYPGCGKTLLASIVAGEF--GLNFISV 964
                 99**************998876..6555554 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.1   0.00052      0.25       6      49 ..     598     636 ..     591     705 .. 0.66
   2 !    7.5   0.1    0.0094       4.6       7      29 ..     935     957 ..     931     990 .. 0.66
   3 ?    0.0   0.0       1.9   9.4e+02      77     117 ..     980    1028 ..     959    1043 .. 0.68
   4 ?    3.5   0.0      0.17        81      41      71 ..    1060    1104 ..    1037    1124 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00052
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlps 49 
                 +++++tG  G+GK+ +++ l+++l e a+      +v ++ +++
  KHJ31369.1 598 SSVLLTGAQGSGKSSVAKVLAHRLRESAF-----FHVTYFPCQK 636
                 5789*******************954332.....2222444443 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0094
      AAA_22   7 ilvvtGesGtGKTtllrrlleql 29 
                  ++++G +G+GKT+l+  ++ ++
  KHJ31369.1 935 GILLYGYPGCGKTLLASIVAGEF 957
                 589************99888777 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 1.9
      AAA_22   77 ellealeqalraravielliiDEaqhlr....s......eealeeLrslln 117 
                   +++++e+a  a+  + +l  DE++ +     +      +++++++ + ++
  KHJ31369.1  980 SVRDLFERAQTAK--PCVLFFDEFDSIApkrgHdstgvtDRVVNQILTQMD 1028
                  4444444444444..46********99765441445555666666655555 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.17
      AAA_22   41 evvfvtlpsstsskdllrellralglelka..............e 71  
                  + + ++lp+++++ d+l++l r+l+le++a              +
  KHJ31369.1 1060 KSIICDLPNEEDRIDILHALGRKLKLEHDArnnlpkiaahtegyS 1104
                  56789************************9666666555554444 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   2.6e-05     0.012       1      28 [.     599     626 ..     599     680 .. 0.81
   2 !    8.6   0.0    0.0036       1.8       2      31 ..     936     965 ..     935    1008 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2.6e-05
                 EEEEE--SSSSHHHHHHHGGGGBS--EE CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreve 28 
                 +vlL G++G+gKs++a+ la++l+ + +
  KHJ31369.1 599 SVLLTGAQGSGKSSVAKVLAHRLRESAF 626
                 59*********************55543 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0036
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvq 31 
                 +lL G pG+gK+ la  +a  ++ ++  v 
  KHJ31369.1 936 ILLYGYPGCGKTLLASIVAGEFGLNFISVK 965
                 89*************999887766666555 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.0   0.00016     0.078       3      90 ..     597     687 ..     595     697 .. 0.70
   2 !   11.9   0.0   0.00037      0.18       6     102 ..     936    1027 ..     931    1031 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00016
                 ---EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS.......EEEEETGGG----------- CS
       AAA_2   3 iisilllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG.......ivllDEidKihpkessgadv 90 
                 ++s+ll+g +g+Gk+ +ak la  l+ +   +++ + +++++++e     +s  + + + +   +  G        v lD+idK +p+ +++ + 
  KHJ31369.1 597 LSSVLLTGAQGSGKSSVAKVLAHRLRESAFFHVTYFPCQKVIKNESR---ISTIKENFQQIFLSAAWGarlgghsLVILDDIDKLCPT-ETELET 687
                 6899******************9999666667777888888885444...4444444444444444445555588************4.444444 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00037
                  EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS...EEEEETGGG----.---------HHHHHH CS
       AAA_2    6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG...ivllDEidKihpk.essgadvSregVqrd 98  
                  ill g  g+Gkt+la  +a    +    ++i +   e+l      +++   + +     ++++     ++++DE d i+pk ++ +  v    V ++
  KHJ31369.1  936 ILLYGYPGCGKTLLASIVAGEFGL----NFISVKGPEILN-----KYIGASEKSVRDLFERAQTAkpcVLFFDEFDSIAPKrGHDSTGVTDRVVNQI 1023
                  778888899999999999988887....888888888888.....55555555555555555555677************98888888988888888 PP

                  HHHH CS
       AAA_2   99 LLqi 102 
                  L q+
  KHJ31369.1 1024 LTQM 1027
                  7774 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   4.7e-05     0.023       5      77 ..     600     679 ..     598     698 .. 0.76
   2 !    8.1   0.0    0.0053       2.6       5      75 ..     936    1003 ..     933    1028 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 4.7e-05
      AAA_14   5 lvitGaRrvGKTtllkqlikell.vkkesilyinldderdkkladpe...kllelileklke.....ekktylflDEiqevp 77 
                 +++tGa  +GK+ ++k l+++l      ++ y+ +++  + +++ ++   ++ +++l+   +      ++++++lD i ++ 
  KHJ31369.1 600 VLLTGAQGSGKSSVAKVLAHRLReSAFFHVTYFPCQKVIKNESRISTikeNFQQIFLSA--AwgarlGGHSLVILDDIDKLC 679
                 789************99998877877789999999997776666442222555666665..144678899********9875 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0053
      AAA_14    5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqe 75  
                  +++ G   +GKT l+  ++ e      +++ ++  +  +k +  +ek  + ++e++++ k  +lf+DE   
  KHJ31369.1  936 ILLYGYPGCGKTLLASIVAGEFG---LNFISVKGPEILNKYIGASEKSVRDLFERAQTAKPCVLFFDEFDS 1003
                  67889999******988887777...7788888777777776666666666666655558999*****876 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   3.5e-05     0.017       3     100 ..     600     691 ..     598     759 .. 0.72
   2 ?    4.9   0.1     0.047        23       3      20 ..     936     953 ..     934     958 .. 0.84
   3 ?   -1.1   0.0       3.3   1.6e+03      67     108 ..     979    1019 ..     968    1046 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 3.5e-05
                 EEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEETTTTTTS-...-HCHHHCCCCTS--SSS-CCHHHHCCSCCCEEEEEE-STT-SS-TCH.. CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegklpqgafklvFflslrelsrsgnarsladllfsqlpepaapvsevwavllelperlLlilDglDelvtdlgq.. 99 
                 v+l+G++GsGK+  ++ la+ ++e+  ++     v +++++++ + +   s + ++ ++++++           ++l    L ilD++D+l+    +  
  KHJ31369.1 600 VLLTGAQGSGKSSVAKVLAHRLRESAFFH-----VTYFPCQKVIKNE---SRISTIKENFQQIFLSAAW----GARLGGHSLVILDDIDKLCPTETEle 686
                 89************************776.....5577777776655...5566666666666544433....45678888899999998887666666 PP

                 ..... CS
       NACHT 100 ....k 100
                      
  KHJ31369.1 687 tsenG 691
                 54432 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.047
                 EEEEC-TTTCHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqkl 20 
                 ++l G +G+GKT L+  +
  KHJ31369.1 936 ILLYGYPGCGKTLLASIV 953
                 7899********998655 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 3.3
                  SSS-CCHHHHCCSCCCEEEEEE-STT-SS-TCH......... CS
       NACHT   67 apvsevwavllelperlLlilDglDelvtdlgqkekqpvrtl 108 
                  + v+    ++++ ++  +l +D +D ++ + g++    ++++
  KHJ31369.1  979 KSVRD-LFERAQTAKPCVLFFDEFDSIAPKRGHDSTGVTDRV 1019
                  45555.44567888899999*******999888444444444 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   0.00028      0.14       1      36 [.     587     622 ..     587     656 .. 0.87
   2 ?    6.6   0.0     0.022        11      14      67 ..     936     987 ..     928    1037 .. 0.77
   3 ?   -1.6   0.4       7.1   3.5e+03      76     117 ..    1185    1248 ..    1129    1259 .. 0.50

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00028
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllk 36 
                 l++++ +l++ + v ++G  G+GKS+++k+la+ l+
  KHJ31369.1 587 LDQIQNNLYHLSSVLLTGAQGSGKSSVAKVLAHRLR 622
                 6788888999999******************99876 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.022
                 EEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqe 67 
                 + + G  G+GK+ L++++ag+       i ++g ++ ++ +  ++k+++ l++ 
  KHJ31369.1 936 ILLYGYPGCGKTLLASIVAGEFGL--NFISVKGPEILNKYIGASEKSVRDLFER 987
                 6789****************9864..5566677777776677777777766666 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 7.1
                  HHHH..........................HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHH CS
                  xxxx..........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   76 vren..........................esdeeiekalsklglkelkdtvvksspssLSgGqkqrv 117 
                  + ++                          ++++e e+++++  l +   t     ++s+S  ++ r+
  KHJ31369.1 1185 ITRKlaeirlekcnlktkimtksaendqneQKQVEQEAVIEWRHLAKSLST----TKASISADERNRL 1248
                  222223333333333333333333334434444445555555444443333....3366666666665 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   4.9e-06    0.0024      16      80 ..     566     624 ..     560     649 .. 0.87
   2 ?   -1.6   0.0       2.5   1.2e+03      61      92 ..     844     874 ..     831     878 .. 0.78
   3 ?    0.2   0.0       0.7   3.4e+02      55      77 ..     935     957 ..     925    1001 .. 0.73

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 4.9e-06
      DUF815  16 lepveevdevklddLvgidkqkealventeqfleglpannvLLwGarGtGKSslvkallneyaee 80 
                 +++++e  + ++ +Lvgid+  +++++n  ++      + vLL+Ga+G+GKSs+ k l ++++e+
  KHJ31369.1 566 INGIAEQLPSEIPNLVGIDDLLDQIQNNLYHL------SSVLLTGAQGSGKSSVAKVLAHRLRES 624
                 56788888889999999999999999998765......57*****************99998765 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.5
      DUF815  61 arGtGKSslvkallneyaeegLrlievekedl 92 
                 +r  G  ++++a+ ++y+     +ie++++d 
  KHJ31369.1 844 TRARGE-AIIRAVSETYKGGAQDIIEITRKDF 874
                 444443.79********************986 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.7
      DUF815  55 nvLLwGarGtGKSslvkallney 77 
                  +LL+G  G+GK  l   +  e+
  KHJ31369.1 935 GILLYGYPGCGKTLLASIVAGEF 957
                 58**********87776666555 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0032       1.5      34     107 ..     598     668 ..     588     687 .. 0.71
   2 !    7.4   0.0     0.006       2.9      35      51 ..     935     951 ..     929     957 .. 0.83
   3 ?    0.2   0.0      0.96   4.7e+02     129     172 ..     980    1023 ..     972    1041 .. 0.76
   4 ?   -2.0   0.1       4.6   2.2e+03     154     179 ..    1207    1233 ..    1204    1236 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0032
      AAA_25  34 elallaGapgtGKttlaldlalavatGkpwlg..pvapeqgkVlyvsaEdsedelrrRlravgealrddarllvld 107
                 + +ll+Ga+g+GK+ +a  la+ + + + +++            ++ +E + +++++ +++++  +++ arl  ++
  KHJ31369.1 598 SSVLLTGAQGSGKSSVAKVLAHRLRE-SAFFHvtY----FPCQKVIKNESRISTIKENFQQIFLSAAWGARLGGHS 668
                 5689*************999988765.44666331....2333456667777777777777776666666665555 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.006
      AAA_25  35 lallaGapgtGKttlal 51 
                  +ll+G pg+GKt la+
  KHJ31369.1 935 GILLYGYPGCGKTLLAS 951
                 589************97 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.96
      AAA_25  129 dvdaleaaieevegvrlvviDplsralggdensnsdv.galveal 172 
                   v++l ++++  +++ ++ +D ++++ +   ++++ v +++v+++
  KHJ31369.1  980 SVRDLFERAQT-AKPCVLFFDEFDSIAPKRGHDSTGVtDRVVNQI 1023
                  57788889888.6799************98888888777777765 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 4.6
      AAA_25  154 alggdensnsdv.galvealeriarrt 179 
                    ++d n++++v +++v  ++++a+ +
  KHJ31369.1 1207 SAENDQNEQKQVeQEAVIEWRHLAKSL 1233
                  5678999999999*********99865 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0    0.0017       0.8       1      26 [.     600     625 ..     600     681 .. 0.79
   2 !    8.7   0.0    0.0046       2.3       1      25 [.     936     960 ..     936    1021 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0017
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   ++l+G++g GKS++ak La++l ++ 
    KHJ31369.1 600 VLLTGAQGSGKSSVAKVLAHRLRESA 625
                   5799****************998765 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0046
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkk 25 
                   i+lyG +g+GK++la  +a ++  +
    KHJ31369.1 936 ILLYGYPGCGKTLLASIVAGEFGLN 960
                   689************9977766633 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00068      0.33      18      41 ..     599     622 ..     585     630 .. 0.87
   2 ?    6.1   0.0     0.012       5.8      19      50 ..     936     965 ..     933     978 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00068
  Zeta_toxin  18 lillgGqpGAGKselaellkdele 41 
                 ++ll G++G+GKs++a+ l+ +l+
  KHJ31369.1 599 SVLLTGAQGSGKSSVAKVLAHRLR 622
                 69*****************99984 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.012
  Zeta_toxin  19 illgGqpGAGKselaellkdelerqgnvvrld 50 
                 ill G pG+GK+ la+ ++ e+  + n++ ++
  KHJ31369.1 936 ILLYGYPGCGKTLLASIVAGEF--GLNFISVK 965
                 7899****************99..78888776 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   6.3e-05      0.03      12      44 ..     588     620 ..     581     659 .. 0.83
   2 ?    2.5   0.0       0.3   1.4e+02      24      82 ..     936    1005 ..     931    1010 .. 0.59

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 6.3e-05
                      HHHHHHHT-SS-EEEEEETT--HHHHHHCC--T CS
  Sigma54_activ_2  12 erLeqaaqsklpvfltGekGsgkelvArlLhkn 44 
                      +++++  +  + v+ltG++Gsgk++vA++L++ 
       KHJ31369.1 588 DQIQNNLYHLSSVLLTGAQGSGKSSVAKVLAHR 620
                      455555577789******************985 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.3
                       EEEEEETT--HHHHHHCC--T........TS-EE--SSTTHHHH-HHHHHHH...TTTSEEEEEE-TT-- CS
  Sigma54_activ_2   24 vfltGekGsgkelvArlLhkn........sgpwleifvverlaklpldlleq...akggtLylkdiadls 82  
                       ++l G +G+gk+l A + + +        +gp +  + +  + k+  dl+e+   ak+ +L++ +++++ 
       KHJ31369.1  936 ILLYGYPGCGKTLLASIVAGEfglnfisvKGPEILNKYIGASEKSVRDLFERaqtAKPCVLFFDEFDSIA 1005
                       7889999999998888765431111110023322222333333566888888444699999999998875 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   6.6e-05     0.032      31     110 ..     595     676 ..     587     684 .. 0.82
   2 ?    2.9   0.0      0.14        66      25      51 ..     925     951 ..     906    1003 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 6.6e-05
       AAA_7  31 knkkpvllvGptGtGKtviikdllkkldkek.ylsltinfsaqtsanqlqdiiesklekrr.kgvygPpggkklvvFvDDln 110
                  +  +vll+G +G+GK++++k l ++l ++  + ++ + +++  + ++  ++i++++++      +g+  g + +v +DD++
  KHJ31369.1 595 YHLSSVLLTGAQGSGKSSVAKVLAHRLRESAfFHVTYFPCQKVIKNESRISTIKENFQQIFlSAAWGARLGGHSLVILDDID 676
                 56679*****************999999655156777899999999999999999998875257899999999999999986 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.14
       AAA_7  25 llelllknkkpvllvGptGtGKtviik 51 
                 + +  l+ +  +ll+G  G+GKt++++
  KHJ31369.1 925 FAQCPLRLRSGILLYGYPGCGKTLLAS 951
                 555667778899***********9876 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0073       3.6       2      28 ..     600     629 ..     600     653 .. 0.86
   2 !    8.9   0.0    0.0032       1.6       2      53 ..     936     989 ..     936    1026 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0073
      AAA_33   2 vllvGlpGsGKstlaerllkklg...avll 28 
                 vll G++GsGKs +a+ l+ +l    ++++
  KHJ31369.1 600 VLLTGAQGSGKSSVAKVLAHRLResaFFHV 629
                 7899*************9877765555555 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0032
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqqsktdytrvld 53 
                 +ll G pG+GK+ la  ++ + g  ++ +  +++++++ g  ++s +d+ + ++
  KHJ31369.1 936 ILLYGYPGCGKTLLASIVAGEFGlnFISVKGPEILNKYIGASEKSVRDLFERAQ 989
                 6789*****************999999999999999988877777776666555 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   0.00019     0.094       9      48 ..     584     624 ..     579     642 .. 0.77
   2 ?    2.6   0.0       0.2        96      22      42 ..     933     953 ..     922     964 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00019
                      HHHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHH.HHHSTT CS
  Sigma54_activat   9 kelleqikkvaktdlsvlitGesGtGKellarai.heaskr 48 
                       +ll+qi++   + +svl+tG +G+GK+ +a+ + h+ ++ 
       KHJ31369.1 584 DDLLDQIQNNLYHLSSVLLTGAQGSGKSSVAKVLaHRLRES 624
                      567888888888899*****************983444443 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.2
                      SS-EEEECSTTSSHHHHHHHH CS
  Sigma54_activat  22 dlsvlitGesGtGKellarai 42 
                      ++ +l+ G  G+GK+lla+ +
       KHJ31369.1 933 RSGILLYGYPGCGKTLLASIV 953
                      5679**************876 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0    0.0021         1       2      22 ..     600     620 ..     599     652 .. 0.88
   2 ?    4.0   0.0      0.11        54       2      34 ..     936     973 ..     935     994 .. 0.72
   3 ?    0.8   0.1         1   5.1e+02      42      70 ..    1140    1169 ..    1106    1187 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0021
      AAA_28   2 ivitGgestGKTtlleaLaar 22 
                 + +tG++++GK+++++ La r
  KHJ31369.1 600 VLLTGAQGSGKSSVAKVLAHR 620
                 789***************977 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.11
      AAA_28   2 ivitGgestGKTtlleaLaar.gypvv....pEaarei 34 
                 i + G +++GKT l++  a + g + +    pE+  ++
  KHJ31369.1 936 ILLYGYPGCGKTLLASIVAGEfGLNFIsvkgPEILNKY 973
                 7899************9996664443311355555555 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 1
      AAA_28   42 gedalpwv.edllafaervleeqleeeaaa 70  
                  +++ + ++ +d+l+f+++ +e ++e+e++a
  KHJ31369.1 1140 NGKVSSKEiQDFLQFRYGEEEDRIEAEQRA 1169
                  3344445558***************99998 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.025        12      12      44 ..     588     622 ..     577     633 .. 0.76
   2 !    8.0   0.0    0.0056       2.7      19      59 ..     933     973 ..     912     988 .. 0.80
   3 ?   -1.1   0.1       3.6   1.8e+03      93     117 ..    1220    1243 ..    1202    1249 .. 0.62

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.025
                 HHHHHCH..TEEEEEEESTTSSHHHHHHHHHHHTT CS
        TsaE  12 kklakal..gdvilLeGdLGaGKTtlvrglakalg 44 
                  +++++l   + +lL+G  G+GK+  ++ la+ l 
  KHJ31369.1 588 DQIQNNLyhLSSVLLTGAQGSGKSSVAKVLAHRLR 622
                 445554433446******************99885 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0056
                 TEEEEEEESTTSSHHHHHHHHHHHTT--..----TTTTSEEEE CS
        TsaE  19 gdvilLeGdLGaGKTtlvrglakalgve..evkSPTFtlveeY 59 
                 ++ ilL+G  G+GKT l+  +a ++g++  +vk P   ++++Y
  KHJ31369.1 933 RSGILLYGYPGCGKTLLASIVAGEFGLNfiSVKGP--EILNKY 973
                 4459***********************98889988..566666 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 3.6
                  CEEEEETGGGGCCCS-S-CEEEEEE CS
        TsaE   93 avvlvEWpekleellpeedleiele 117 
                  +  ++EW + +++ l++++ +i+ +
  KHJ31369.1 1220 QEAVIEWRHLAKS-LSTTKASISAD 1243
                  3589***999554.45555666654 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.013       6.4      24      48 ..     599     623 ..     595     672 .. 0.74
   2 !    7.9   0.0    0.0036       1.7      25      42 ..     936     953 ..     933     957 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.013
  Mg_chelatase  24 nlllvGppGsGKtmlakrlpsllpp 48 
                   ++ll+G+ GsGK+ +ak l+  l +
    KHJ31369.1 599 SVLLTGAQGSGKSSVAKVLAHRLRE 623
                   689**************99876654 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0036
  Mg_chelatase  25 lllvGppGsGKtmlakrl 42 
                   +ll+G pG+GKt+la+ +
    KHJ31369.1 936 ILLYGYPGCGKTLLASIV 953
                   89*************876 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0075       3.6      51      82 ..     598     629 ..     585     696 .. 0.81
   2 !    6.6   0.0    0.0077       3.7      52      97 ..     935     978 ..     931     989 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0075
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfva 82 
                  +vLl+G +g+Gk+++a  +++ l e+  f +
  KHJ31369.1 598 SSVLLTGAQGSGKSSVAKVLAHRLRESAFFHV 629
                 589*********************99877743 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0077
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  52 avLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkkte 97 
                 ++Ll G +g Gkt la  ++ e+g  + f++++g e+    +  +e
  KHJ31369.1 935 GILLYGYPGCGKTLLASIVAGEFG--LNFISVKGPEILNKYIGASE 978
                 79*********************9..89******999887776655 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0077       3.7       4      36 ..     582     614 ..     580     620 .. 0.79
   2 ?    6.1   0.0     0.013       6.1      19      37 ..     933     951 ..     925     965 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0077
      ATPase   4 gIeglDeilkgGipegrvvlitGepGtGKtifa 36 
                 gI  l + +++ +++ ++vl+tG  G+GK+ +a
  KHJ31369.1 582 GIDDLLDQIQNNLYHLSSVLLTGAQGSGKSSVA 614
                 454443444699*****************9776 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.013
      ATPase  19 grvvlitGepGtGKtifal 37 
                 ++ +l++G pG+GKt++a 
  KHJ31369.1 933 RSGILLYGYPGCGKTLLAS 951
                 5679************985 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0    0.0092       4.5       4     140 ..     599     744 ..     598     764 .. 0.58
   2 ?    5.5   0.1     0.025        12       5      20 ..     936     951 ..     933     964 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0092
      AAA_24   4 kiliyGpsgiGKTtlakel.....gpkplfidtekGlksldadkfpdieswedfldevvel......aaeladyktlviDtideleelclaevirqnek 91 
                 ++l++G +g+GK+++ak l     +  ++ +  +   k +++        + ++++ ++++       a l + + +++D id+l+   ++     n++
  KHJ31369.1 599 SVLLTGAQGSGKSSVAKVLahrlrESAFFHVTYFPCQKVIKNES-----RISTIKENFQQIflsaawGARLGGHSLVILDDIDKLCPTETELETSENGR 692
                 589**************995554333333333333333333333.....34444444444455544444455568888888888877666666666666 PP

      AAA_24  92 aeskedkgdgkGygelaeefrrllkklqelrk...nvifiahektrkdedpe 140
                  ++++++      ++++ + + +l +++e+++   nvi+ +h  ++++  ++
  KHJ31369.1 693 SRQISEGLCIIIRKYCRLDTGVTLLAITETKEslhNVIISGHVFQETFALKT 744
                 6666553333333445555555556666666666688888887777776554 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.025
      AAA_24   5 iliyGpsgiGKTtlak 20 
                 il+yG +g GKT la+
  KHJ31369.1 936 ILLYGYPGCGKTLLAS 951
                 89**********9997 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0     0.003       1.5      49     117 ..     599     675 ..     588     686 .. 0.71
   2 ?    4.0   0.0     0.076        37      47      67 ..     933     953 ..     926     965 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.003
   IstB_IS21  49 nivllGpsGvGKshlaialgveavr.aglsvlfvrvedLveelkr.arrdgklaral......krllkvdllilDdl 117
                 +++l+G  G GKs +a  l+++  + a ++v+++  ++++++ +r    +++++++       +rl   +l+ilDd+
  KHJ31369.1 599 SVLLTGAQGSGKSSVAKVLAHRLREsAFFHVTYFPCQKVIKNESRiSTIKENFQQIFlsaawgARLGGHSLVILDDI 675
                 799*******************9995668999999999887644313333334333212222245666678888887 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.076
   IstB_IS21  47 kenivllGpsGvGKshlaial 67 
                 + +i+l G +G GK+ la  +
  KHJ31369.1 933 RSGILLYGYPGCGKTLLASIV 953
                 5789*************9755 PP

>> SKI  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0      0.02       9.9       2      17 ..     607     622 ..     606     653 .. 0.85
   2 ?    5.4   0.0     0.038        19       1      23 [.     942     964 ..     942     992 .. 0.73

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.02
                 TSSHHHHHHHHHHHHT CS
         SKI   2 GaGKstvGkllAkklg 17 
                 G+GKs+v+k lA++l+
  KHJ31369.1 607 GSGKSSVAKVLAHRLR 622
                 9************997 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.038
                 TTSSHHHHHHHHHHHHTSEEEEH CS
         SKI   1 mGaGKstvGkllAkklglefiDl 23 
                 +G+GK+ ++ ++A + gl+fi +
  KHJ31369.1 942 PGCGKTLLASIVAGEFGLNFISV 964
                 6*******************976 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.048        23      48      69 ..     600     621 ..     583     653 .. 0.86
   2 ?    6.8   0.0     0.012       5.7      48     113 ..     936    1002 ..     926    1015 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.048
       Rad17  48 LLisGPsGCgkstvvkvLskel 69 
                 +L++G  G gks v kvL+  l
  KHJ31369.1 600 VLLTGAQGSGKSSVAKVLAHRL 621
                 699***************9876 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.012
       Rad17   48 LLisGPsGCgkstvvkvLskelgiklrewlnpvslke.pdnqksdfkgltekesrflsqiesfkele 113 
                  +L+ G +GCgk+    +++ e+g +++    p  l++     ++ ++ l+e  ++  + +  f e+ 
  KHJ31369.1  936 ILLYGYPGCGKTLLASIVAGEFGLNFISVKGPEILNKyIGASEKSVRDLFERAQTAKPCVLFFDEFD 1002
                  6889***********************9999977755145588888999998888888888888884 PP

>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00025      0.12       5      30 ..     600     625 ..     597     641 .. 0.85
   2 ?   -1.9   0.0       5.7   2.8e+03       5      23 ..     936     954 ..     934     962 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00025
                 EEEESSTTSSHHHHHHHHHHHHHHTT CS
  APS_kinase   5 vwltGlsgsGKstianalekkLvekg 30 
                 v+ltG  gsGKs++a+ l+++L+e+ 
  KHJ31369.1 600 VLLTGAQGSGKSSVAKVLAHRLRESA 625
                 89********************9876 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 5.7
                 EEEESSTTSSHHHHHHHHH CS
  APS_kinase   5 vwltGlsgsGKstianale 23 
                 ++l G+ g GK+ +a  ++
  KHJ31369.1 936 ILLYGYPGCGKTLLASIVA 954
                 7899**********99876 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00063      0.31      22      38 ..     598     613 ..     587     616 .. 0.80
   2 ?   -0.2   0.0       1.7   8.2e+02      19      36 ..     930     947 ..     925     953 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00063
      AAA_29  22 kgatlltGpsGsGKSTl 38 
                 + ++lltG++GsGKS++
  KHJ31369.1 598 S-SVLLTGAQGSGKSSV 613
                 3.49***********85 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.7
      AAA_29  19 idlkgatlltGpsGsGKS 36 
                 ++l++ +ll G  G GK+
  KHJ31369.1 930 LRLRSGILLYGYPGCGKT 947
                 4555569**********6 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00061       0.3       2      45 ..     600     644 ..     599     656 .. 0.91
   2 ?   -0.5   0.0       2.1     1e+03       2      23 ..     936     957 ..     935     968 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00061
                 EEEE--TTSSHHHHHHHHHHHH...G.GGEEEEEEEEE------- CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkssg.vkvgGfyteevreggrri 45 
                 v++TG +G+GK+ + k +++ l++s  ++v+ f +++v ++++ri
  KHJ31369.1 600 VLLTGAQGSGKSSVAKVLAHRLRESAfFHVTYFPCQKVIKNESRI 644
                 89********************998527999*******9999998 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 2.1
                 EEEE--TTSSHHHHHHHHHHHH CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlell 23 
                 +++ G pG GKt l + v+ + 
  KHJ31369.1 936 ILLYGYPGCGKTLLASIVAGEF 957
                 67889*******9999887765 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0      0.25   1.2e+02       1      19 [.     603     621 ..     603     631 .. 0.79
   2 ?    8.7   0.0    0.0045       2.2       1      25 [.     939     963 ..     939     986 .. 0.93

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.25
                 EE-TTSSHHHHHHHHHHHH CS
      AAA_17   1 lGgPGsGKgtqceklveky 19 
                 +G  GsGK+ +++ l++++
  KHJ31369.1 603 TGAQGSGKSSVAKVLAHRL 621
                 6999********9999766 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0045
                 EE-TTSSHHHHHHHHHHHHTEEEEE CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthls 25 
                 +G PG+GK+ +++ ++ ++g+ ++s
  KHJ31369.1 939 YGYPGCGKTLLASIVAGEFGLNFIS 963
                 7*******************99998 PP

>> Torsin  Torsin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0064       3.1      58     115 ..     602     657 ..     590     664 .. 0.86
   2 ?    2.2   0.0      0.38   1.8e+02      56      75 ..     936     955 ..     890     965 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0064
                 EEE-TTSSHHHHHHHHHHHHSTTGGGSTTEEEEEHHHHS--GGGHHHHHHHHHHHHHH CS
      Torsin  58 fhGwtGtGknfvaeiiaenlyrdGlrsdyvkkfvatadfPkkkkveeykeelkeqire 115
                 + G  G+Gk+ va+++a+ l ++     +v++f  ++   +++++++ ke++++   +
  KHJ31369.1 602 LTGAQGSGKSSVAKVLAHRLRESAF--FHVTYFPCQKVIKNESRISTIKENFQQIFLS 657
                 6799**************9977655..689*******************999987655 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.38
                 EEEEE-TTSSHHHHHHHHHH CS
      Torsin  56 lsfhGwtGtGknfvaeiiae 75 
                 + ++G++G Gk  +a+i+a 
  KHJ31369.1 936 ILLYGYPGCGKTLLASIVAG 955
                 4589*************986 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00072      0.35       4      79 ..     600     675 ..     598     678 .. 0.83
   2 ?   -0.9   0.0       1.9   9.2e+02       4      22 ..     936     954 ..     935     965 .. 0.84
   3 ?   -2.4   0.6       5.4   2.6e+03     125     203 ..    1144    1223 ..    1117    1254 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00072
                 EEEE--TTSSHHHHHHHHHHHHHHTT.--EEEE-THHHH.TTSSS--GGGHHHHHHHHHHHHHHHHTT.SEEEE-S- CS
       KTI12   4 vvltGlPssGKstrakeLakaleeek.rsvvviddeslgiekdsykdsakekalRsslrsavkrdLskekvVIvDsl 79 
                 v+ltG   sGKs++ak La+ l+e+   +v++   +++  +++s  ++ ke   +  l +a   +L  + +VI+D++
  KHJ31369.1 600 VLLTGAQGSGKSSVAKVLAHRLRESAfFHVTYFPCQKVI-KNESRISTIKENFQQIFLSAAWGARLGGHSLVILDDI 675
                 89**********************662577777777766.6666688888999999999999999999999999986 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.9
                 EEEE--TTSSHHHHHHHHH CS
       KTI12   4 vvltGlPssGKstrakeLa 22 
                 ++l G+P  GK+ +a+ +a
  KHJ31369.1 936 ILLYGYPGCGKTLLASIVA 954
                 799*********9997665 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 5.4
                  S-HHHHHHHHHH---TTSS-GGGS.-SEEEE.TTS---HHHHHHHHHHHHTS--SSSTT-------HHHHHHHHHHHHHH CS
       KTI12  125 yekelldaLiqRyeePdsknrWDs.PlftvlsaeeklpldeilkaliekkklkpnqatlskplaeanflqeLdketseiv 203 
                   +ke+ d L  Ry e +++   ++   + + + ++  + + i  +l e + +k n +t  + ++ +n  +e +++ +e v
  KHJ31369.1 1144 SSKEIQDFLQFRYGEEEDRIEAEQrARVGINKSKDLAERATITRKLAEIRLEKCNLKTKIMTKSAENDQNEQKQVEQEAV 1223
                  66777777888887777777776513455665666666778888888888888888887777777777666666655544 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0    0.0011      0.54       4      33 ..     600     630 ..     598     644 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0011
                 EEEEE-TTSSHHHHHHHHHHHS.SS-EEEEE CS
         CPT   4 ilLnGgsssGKsslaralqevl.depwlhlg 33 
                 +lL G+  sGKss+a++l + l + +++h+ 
  KHJ31369.1 600 VLLTGAQGSGKSSVAKVLAHRLrESAFFHVT 630
                 89****************8765166788875 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0    0.0019      0.92      23      85 ..     600     663 ..     582     704 .. 0.72
   2 ?    2.0   0.2      0.34   1.6e+02      23      38 ..     936     951 ..     931     964 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0019
    ATPase_2  23 yfiYGpegsGKtaLlkeiienledkdkyviyyialree.siskldefieeeeekkklekalgia 85 
                 ++++G +gsGK+++ k ++ +l+++ + ++ y++ +++ ++++  ++i+e+ ++ +l+ a g +
  KHJ31369.1 600 VLLTGAQGSGKSSVAKVLAHRLRESAFFHVTYFPCQKViKNESRISTIKENFQQIFLSAAWGAR 663
                 6789******************999986666666665414444444455666666666555555 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.34
    ATPase_2  23 yfiYGpegsGKtaLlk 38 
                 +++YG  g+GKt L  
  KHJ31369.1 936 ILLYGYPGCGKTLLAS 951
                 689*********8864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       842  (0.046963); expected 358.6 (0.02)
Passed bias filter:                      601  (0.0335211); expected 358.6 (0.02)
Passed Vit filter:                        86  (0.0047967); expected 17.9 (0.001)
Passed Fwd filter:                        37  (0.0020637); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              37  [number of targets reported over threshold]
# CPU time: 1.01u 0.26s 00:00:01.27 Elapsed: 00:00:00.46
# Mc/sec: 8303.59
//
Query:       KHJ31370.1  [L=214]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.33   11.1   6.1       0.78    9.9   6.1    1.6  1  CFEM      CFEM domain


Domain annotation for each model (and alignments):
>> CFEM  CFEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   6.1   4.4e-05      0.78       4      66 .]      16      90 ..      14      90 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 4.4e-05
                TS-GGGTCGGG---TTSS.S-.....TT-HHHHH...H-HHHHHH....HHHHHHHH--THHHH.HHHHHHHHHHH CS
        CFEM  4 alPkCaqdClaeavkkssgCa.....kddtaCiC...tnaklqse....itdCvtaaCtaeeal.aavnaasslCa 66
                 lP+Ca +C +    + + C        d +C+C   + +++qs      + C + +Ct e +l +++++ s++Ca
  KHJ31370.1 16 VLPACASNCGTLFDVQGK-CVppvtkMVDNKCFCldnRLKPFQSGntgvSSVCGATSCTSETDLeTIRKWYSKFCA 90
                59*******988554444.643333377999***976557777762222357*******66554389999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       659  (0.0367561); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1606.66
//
Query:       KHJ31371.1  [L=383]
Description: putative major facilitator superfamily transporter protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-29  103.2  28.2    2.8e-29  102.2  28.2    1.5  1  MFS_1     Major Facilitator Superfamily
     0.0045   16.9   0.1      0.017   15.1   0.1    2.0  1  TM_helix  Conserved TM helix


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.2  28.2   3.1e-33   2.8e-29      62     352 ..       4     309 ..       1     341 [. 0.86

  Alignments for each domain:
  == domain 1  score: 102.2 bits;  conditional E-value: 3.1e-33
       MFS_1  62 rrvlllglllfalglllllfasslw.lllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg......Wrav 153
                  r++ +++++++l+++++ f  s+w  l+++r + Gl++++l+p+++++++ w++++e g   +++ ++++++  +g ll++++a   g      W ++
  KHJ31371.1   4 SRFIPITMIIWGLCMTFMGF-VSSWsGLMAARWFLGLAEAGLYPGINYYLSCWYKRSELGIRAAIFFSAAAISGSFGGLLAAAIAKMDGirnltgWAWL 101
                 57899*********888889.56666***********************************************************8888999999**** PP

       MFS_1 154 fyilaivsllafvlfllllpeepperkrkspkeee..............kgtgpaplvp.......awkallkdpvlwillialllfffgfsglltllp 231
                 f++ + +++++++ + l+l+++ p+++++ + e++              +        +        + + lkd  +w+ +++++++ + +++++++lp
  KHJ31371.1 102 FILEGTLTAILGI-ASLWLVQDFPDKAKFLTPEDRarvtqrlnaekqssV--------DhetfemkYFVMALKDYKMWLGMAIFAGADMPLYAFSIFLP 191
                 *************.577787888888888777777777776544443322........245555667999999999*********************** PP

       MFS_1 232 lylqevlglsglllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllllvlvliGfglgfvfpsllalasdlap 330
                 ++    lg++ l +a ll+  +++++ail +++g+++dr  +r r ++++l  +l+ +g+ +l v++++ + +++ +l  +g   + p  ++++s+++ 
  KHJ31371.1 192 SI-IHELGYT-LTSAQLLSVPPYIFAAILTIFIGWIADR--KRQRGIFNILTSSLGIIGFTMLLVSQNPGIKYAGTFLGALGIYPCLPNTITWISNNIE 286
                 *7.*******.888888899999**************99..999**********************888888877666555888888888888888884 PP

       MFS_1 331 p.eeagtasglfntagslggalg 352
                 +  ++g ++g++   g+l g+++
  KHJ31371.1 287 EsYKRGIVLGFVIGWGNLNGIVS 309
                 43788888888888888777664 PP

>> TM_helix  Conserved TM helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   1.9e-06     0.017       9      43 ..     205     239 ..     202     241 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.9e-06
                 HHHTTHSHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    TM_helix   9 ellsflPnLvgAilILlvGwiiAkfvsrlvtklla 43 
                 +lls  P +++Ail  ++Gwi  +   r++ ++l+
  KHJ31371.1 205 QLLSVPPYIFAAILTIFIGWIADRKRQRGIFNILT 239
                 789999***************87777777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       690  (0.0384851); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 2944.61
//
Query:       KHJ31372.1  [L=284]
Description: putative slx8 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-10   40.5  10.9    2.7e-10   39.9  10.9    1.2  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    3.3e-07   30.0  16.4    5.4e-07   29.4  16.4    1.4  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    1.1e-06   28.4  15.0    1.8e-06   27.7  15.0    1.4  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    2.3e-06   27.9  14.5    3.5e-06   27.2  14.5    1.3  1  zf-RING_2     Ring finger domain
    2.8e-06   27.1  12.5    4.9e-06   26.3  12.5    1.4  1  Prok-RING_4   Prokaryotic RING finger family 4
    4.7e-06   26.5  13.7      8e-06   25.7  13.7    1.4  1  zf-RING_5     zinc-RING finger domain
    6.1e-05   23.0   8.9    6.1e-05   23.0   8.9    2.0  2  zf-RING_UBOX  RING-type zinc-finger
      0.002   17.9   9.1     0.0038   17.0   9.1    1.4  1  zf-RING_4     RING/Ubox like zinc-binding domain
  ------ inclusion threshold ------
      0.014   15.4   1.8      0.021   14.8   1.8    1.4  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
       0.04   14.2  10.5      0.081   13.2  10.5    1.5  1  zf-rbx1       RING-H2 zinc finger domain
      0.081   13.1  10.2       0.17   12.1  10.1    1.7  1  zf-C3HC4_4    zinc finger of C3HC4-type, RING
       0.12   12.3   5.3       0.21   11.5   5.3    1.3  1  zf-RING_6     zf-RING of BARD1-type protein
       0.46   10.8   6.3       0.76   10.1   6.3    1.3  1  VWC           von Willebrand factor type C domain


Domain annotation for each model (and alignments):
>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9  10.9     2e-13   2.7e-10       2      47 ..     203     249 ..     202     250 .. 0.94

  Alignments for each domain:
  == domain 1  score: 39.9 bits;  conditional E-value: 2e-13
                 GSB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHH..TT-B-TTT--B- CS
  zf-C3HC4_3   2 deeCviClerprnvvllpCgHlvlCeeCaekllk..rkkkCpiCrrpi 47 
                 d +C+iC+++p + ++ +CgHl +C+eC+ + l    kk Cp+Cr+ +
  KHJ31372.1 203 DFQCIICMDSPTDLTITHCGHL-FCSECLHQALHmgDKKCCPVCRSAV 249
                 679*******************.********99999*********875 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4  16.4   3.9e-10   5.4e-07       1      40 []     205     245 ..     205     245 .. 0.87

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 3.9e-10
  zf-C3HC4_2   1 kCpiCldmlkdpsvvtpCgHvfCqkCilrsLe..ekneCPlC 40 
                 +C iC+d+  d +++t CgH fC++C++++L+  +k+ CP+C
  KHJ31372.1 205 QCIICMDSPTD-LTITHCGHLFCSECLHQALHmgDKKCCPVC 245
                 7*********9.7****************766115669**** PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7  15.0   1.3e-09   1.8e-06       1      41 []     206     245 ..     206     245 .. 0.97

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 1.3e-09
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 C+iC++ +++ + ++ C+H fCs+C+ + l    k++CP+C
  KHJ31372.1 206 CIICMDSPTDLT-ITHCGHLFCSECLHQALHMGDKKCCPVC 245
                 ************.******************988899**** PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2  14.5   2.5e-09   3.5e-06       2      44 .]     205     246 ..     204     246 .. 0.87

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 2.5e-09
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssst..CPlCr 44 
                 +C IC+   +s+ ++++++CgH f+ eCl + l+   +  CP+Cr
  KHJ31372.1 205 QCIICM---DSPTDLTITHCGHLFCSECLHQALHMGDKkcCPVCR 246
                 8****8...7777888888************988877788****9 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3  12.5   3.6e-09   4.9e-06       1      39 [.     206     248 ..     206     252 .. 0.90

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 3.6e-09
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCfdsk....dlssCPlCqrr 39 
                  C++C  ++++  +  CgHl+C eC+ ++    d + CP+C++ 
   KHJ31372.1 206 CIICMDSPTDLTITHCGHLFCSECLHQAlhmgDKKCCPVCRSA 248
                  **************************996655666*****986 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7  13.7   5.8e-09     8e-06       2      43 ..     206     246 ..     204     247 .. 0.94

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 5.8e-09
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll..ekeavCpiCr 43 
                 C +C+++     +  +t CgH fC++Cl+++l  + +++Cp+Cr
  KHJ31372.1 206 CIICMDSP---TDLTITHCGHLFCSECLHQALhmGDKKCCPVCR 246
                 88999999...99******************************9 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   8.9   4.5e-08   6.1e-05       1      39 []     206     243 ..     206     243 .. 0.85
   2 ?    0.7   0.2       0.4   5.6e+02       1       6 [.     242     247 ..     242     254 .. 0.79

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 4.5e-08
  zf-RING_UBOX   1 CpIClelftdPlvlpCGHtFCreClwelskslegafkCP 39 
                   C IC+++ td ++++CGH FC+eCl  +  + +++  CP
    KHJ31372.1 206 CIICMDSPTDLTITHCGHLFCSECL-HQALHMGDKKCCP 243
                   99***9888774579**********.6788888888887 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.4
  zf-RING_UBOX   1 CpICle 6  
                   Cp+C++
    KHJ31372.1 242 CPVCRS 247
                   ****86 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   9.1   2.7e-06    0.0038      12      45 ..     213     247 ..     205     250 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 2.7e-06
   zf-RING_4  12 dkdlkpCeCgyqiClfCyhrile.eeegrCPaCre 45 
                  +dl+  +Cg+ +C  C+h++l+   +++CP Cr+
  KHJ31372.1 213 PTDLTITHCGHLFCSECLHQALHmGDKKCCPVCRS 247
                 35667779**************9546999*****8 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   1.8   1.6e-05     0.021      38      82 ..     206     250 ..     163     253 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.6e-05
                 CSTTTTT.S-EEEBTTS-EEEHHHHHHHHHHHSTSSB-TTTSSB-- CS
  zf-ANAPC11  38 ckfpGdd.cplvlGkckhnfhlhcilkwletetskglcpmcrqtfk 82 
                 c +  d    l + +c h f   c+ + l+    k+ cp+cr +++
  KHJ31372.1 206 CIICMDSpTDLTITHCGHLFCSECLHQALHMG-DKKCCPVCRSAVY 250
                 44444442458899***************975.5789*****8775 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2  10.5   5.9e-05     0.081      13      55 .]     205     246 ..     200     246 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 5.9e-05
     zf-rbx1  13 acieckapgdeecpvvlGeCgHaFHlhCiskWlkt..rkvCPlcr 55 
                 +ci c  + ++   +++ +CgH F  +C+++ l+   +k CP+cr
  KHJ31372.1 205 QCIICMDSPTD---LTITHCGHLFCSECLHQALHMgdKKCCPVCR 246
                 68888888888...66667***************999999****8 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1  10.1   0.00012      0.17       1      42 []     206     245 ..     206     245 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00012
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 C iC+d  ++ +   CGh fC +C+ +  +  d++   Cp+C
  KHJ31372.1 206 CIICMDSPTDLTITHCGHLFCSECLHQALHMGDKK--CCPVC 245
                 889999999988999************99999886..9**99 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   5.3   0.00015      0.21      21      50 ..     216     249 ..     200     253 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00015
   zf-RING_6  21 vclggcehifcsncisdcfgsg....cpvcytpa 50 
                 + +  c h+fcs+c+ + +  g    cpvc +  
  KHJ31372.1 216 LTITHCGHLFCSECLHQALHMGdkkcCPVCRSAV 249
                 56789***********99876555659***8765 PP

>> VWC  von Willebrand factor type C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   6.3   0.00055      0.76      15      57 .]     200     245 ..     186     245 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00055
         VWC  15 kpdl..CkkCtCkd...skvnCdkikCpeskCespaaakaegeCCkvC 57 
                 k +   C++C         ++C ++ C  s+C ++a+   +++CC+vC
  KHJ31372.1 200 KLSDfqCIICMDSPtdlTITHCGHLFC--SECLHQALHMGDKKCCPVC 245
                 444355888876556667789999999..59***************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       937  (0.0522617); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2181.18
//
Query:       KHJ31373.1  [L=256]
Description: putative ran-specific gtpase-activating protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-48  162.2   1.2      1e-47  161.4   1.2    1.4  1  Ran_BP1   RanBP1 domain
    0.00024   21.0   0.1     0.0015   18.5   0.1    2.0  1  WH1       WH1 domain


Domain annotation for each model (and alignments):
>> Ran_BP1  RanBP1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.4   1.2   1.1e-51     1e-47       3     122 .]     116     236 ..     114     236 .. 0.98

  Alignments for each domain:
  == domain 1  score: 161.4 bits;  conditional E-value: 1.1e-51
                 --SSTTEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-TTS-EEESTTESSEEEEEE.EE-TTSSSEEEEEE CS
     Ran_BP1   3 ksgEEdEevlfkqraKLfrfdaekkewkeRGvGdiKilkkkddekvRllmRrdqvlkvcaNhvitkemklkplagsdrslvwta.adaadeeakleqla 100
                 k+ EE+Ee  fk+raKLf+fd+e ++wkeRG+Gd+++lk+k+++ +Rl+mRr+++lkvcaNh+i++emkl p+ gsdrs+vwta ad++++e+++++la
  KHJ31373.1 116 KTFEESEEQTFKMRAKLFKFDKEGNDWKERGTGDVRLLKHKENGITRLVMRREKTLKVCANHYIVPEMKLSPNVGSDRSWVWTAaADVSENEPEAQTLA 214
                 899********************************************************************************989************* PP

                 EEESSHHHHHHHHHHHHHHHHH CS
     Ran_BP1 101 ikfkkkeeadefkkkfeeakke 122
                 i+f + e+a+ fk++f +a++e
  KHJ31373.1 215 IRFANSENANLFKEAFIKAQQE 236
                 *******************985 PP

>> WH1  WH1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.1   1.6e-07    0.0015      12     108 ..     126     231 ..     117     234 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 1.6e-07
                 EEEEEEEEEEETTTTCEEEECECEEEEEEEEETTTTEEEEEEEETTT-SEEEEEEE-SS---B-SSSSEEEE....ESSSS.........EEEEEESSH CS
         WH1  12 asavaqvyladpakketWikakhagavslvkdstqnsyflrlvklqdakvvieqeiyknleynqarqkfhtf....edera.........vvGLnFase 97 
                 ++ +a++++ d + +  W++ + +g v l k++ +   +l+++  +  kv  ++ i+++++ + +      +    +               ++ Fa+ 
  KHJ31373.1 126 FKMRAKLFKFDKEGND-WKE-RGTGDVRLLKHKENGITRLVMRREKTLKVCANHYIVPEMKLSPNVGSDRSWvwtaAA--DvsenepeaqTLAIRFANS 220
                 6789******999999.***.***********************89**************987654444443222211..0122333334788888888 PP

                 HHHHHHHHHHH CS
         WH1  98 eeakkFakkvq 108
                 e+a+ F +++ 
  KHJ31373.1 221 ENANLFKEAFI 231
                 88888888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1598  (0.0891293); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 1901.23
//
Query:       KHJ31374.1  [L=248]
Description: putative upf0664 stress-induced protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.086   12.9   0.0       0.18   11.9   0.0    1.4  1  DUF1830   Domain of unknown function (DUF1830)


Domain annotation for each model (and alignments):
>> DUF1830  Domain of unknown function (DUF1830)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   9.8e-06      0.18      29      49 ..      19      39 ..      17      43 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 9.8e-06
     DUF1830 29 PgerllFeAppeaeLEIhtge 49
                P er+lF+++p + LEI t +
  KHJ31374.1 19 PNERILFTSHPRTSLEIITPN 39
                9****************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1931.01
//
Query:       KHJ31375.1  [L=169]
Description: hypothetical protein EV44_g3017 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.4e-16   60.2   2.4    3.9e-16   60.0   2.4    1.0  1  DUF4604      Domain of unknown function (DUF4604)
  ------ inclusion threshold ------
      0.038   14.1   1.0        1.8    8.8   0.3    2.2  2  Transglut_C  Transglutaminase family, C-terminal ig like doma
       0.32   11.5   2.4       0.39   11.3   0.7    1.9  2  Di19_C       Stress-induced protein Di19, C-terminal


Domain annotation for each model (and alignments):
>> DUF4604  Domain of unknown function (DUF4604)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   2.4   6.5e-20   3.9e-16       1     171 [.       7     169 .]       7     169 .] 0.71

  Alignments for each domain:
  == domain 1  score: 60.0 bits;  conditional E-value: 6.5e-20
     DUF4604   1 knLsYsaeePaFLarLkaqvagkesedpilagkrralpkkrdeseeeDeaPqVVvlkeGkhlsaeevevekdaakgkekeeeeeeeeegeeaeediefk 99 
                 knL+Y++++P+FL rL a  ++ + +++ +    r+  k rd ++e++  P+ ++++   +l+++e+e  + + ++  +e++e e ++ + +ee     
  KHJ31375.1   7 KNLTYDSTLPPFLSRLYASTSSDDHQKNKVV---RP-CKARDLDQEAENDPVYFDEETRHTLTKKEWESKELRIEKLHEEKTEMEVNTVALGEE----- 96 
                 79**********************6665555...55.5889999************99999******876664444443333333333333333..... PP

     DUF4604 100 kpkkasikekasslaaksskkkkk.gkvvgeedeeeedkskakkkekekkkakkkkkk....kkkkkkkkklLSFgd 171
                     +++ e + ++   + +kk+  gkv++ +d+e+  +++++++  +k+  +++  k     k k  kk++LSF++
  KHJ31375.1  97 ----KTVVEMSRNTMKHGMRKKRLiGKVIEPQDDENYLEKTTPTNVGNKNLVNNTIAKpitqGKMKHGKKIKLSFDE 169
                 ....222122233444446777778********877778888877777765555544457788999*********86 PP

>> Transglut_C  Transglutaminase family, C-terminal ig like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.3   0.00029       1.8      51      95 ..      65     109 ..      58     116 .. 0.89
   2 ?    4.5   0.0    0.0065        39      54      87 ..     113     146 ..     109     165 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00029
                  EEEEEEEEEEEE-TTEEEEEEEEE-HHSHEEECCEEEEEECSEEE CS
  Transglut_C  51 aefkkksleltLePkeeksvrlkilpskyGerkllvelssdalak 95 
                  ++++ +s+el++e  +e+++++++  +  Ge+k++ve+s + +++
   KHJ31375.1  65 TKKEWESKELRIEKLHEEKTEMEVNTVALGEEKTVVEMSRNTMKH 109
                  5667789999****************************9999986 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0065
                  EEEEEEEEE-TTEEEEEEEEE-HHSHEEECCEEE CS
  Transglut_C  54 kkksleltLePkeeksvrlkilpskyGerkllve 87 
                  kk+     +eP+  +++  k++p+++G+++l+ +
   KHJ31375.1 113 KKRLIGKVIEPQDDENYLEKTTPTNVGNKNLVNN 146
                  555556679******************9666654 PP

>> Di19_C  Stress-induced protein Di19, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.7   6.6e-05      0.39      32      92 ..      16      77 ..       2      81 .. 0.66
   2 ?   -1.2   0.0      0.49   2.9e+03      54      76 ..     122     144 ..     111     163 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.6e-05
      Di19_C 32 DpLLSsfilnlptsdeeessk.pessveessvkksseekvlersvd.sslseeereekarrse 92
                 p+LS +  +++ sd+++++k ++  +  + +++++++ v   ++  ++l+++e e k  r+e
  KHJ31375.1 16 PPFLSRLYASTS-SDDHQKNKvVRPCKARDLDQEAENDPVYFDEETrHTLTKKEWESKELRIE 77
                488888888555.66666666366666666666666666555554479*******99987765 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.49
      Di19_C  54 essveessvkksseekvlersvd 76 
                 e +++e++ +k+++++v ++++ 
  KHJ31375.1 122 EPQDDENYLEKTTPTNVGNKNLV 144
                 55677777777777777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1329.97
//
Query:       KHJ31376.1  [L=604]
Description: putative metal ion transporter metal ion transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-87  293.3  16.6    2.2e-87  293.3  16.6    1.7  2  Nramp     Natural resistance-associated macrophage protein
  ------ inclusion threshold ------
        5.3    5.6   7.6       0.43    9.2   0.9    2.1  2  Ndc1_Nup  Nucleoporin protein Ndc1-Nup


Domain annotation for each model (and alignments):
>> Nramp  Natural resistance-associated macrophage protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  293.3  16.6   2.5e-91   2.2e-87       3     352 ..     167     546 ..     165     551 .. 0.93
   2 ?   -3.3   1.1      0.38   3.4e+03      55      70 ..     580     595 ..     568     599 .. 0.46

  Alignments for each domain:
  == domain 1  score: 293.3 bits;  conditional E-value: 2.5e-91
       Nramp   3 tdlqaGaqfGykLlwvlllstllaillqelsarLGlvTgkglaelirerlpkkvsillwilaelaiiatdlaeviGaAialnllf.gipllvgvlitav 100
                 t + aGa++ ykLl + l+s+++ai+lq l+++LG vTg +lae++r  lpk+++++l++laelaiiatdlaeviG+Aia+nll+ +ipl++g+ + ++
  KHJ31376.1 167 TGVVAGATYRYKLLFAGLMSNVFAIFLQILCIKLGSVTGLNLAEACRSFLPKWLNYFLYVLAELAIIATDLAEVIGTAIAINLLIpKIPLIIGCALSII 265
                 6689*********************************************************************************************** PP

       Nramp 101 lvllllfle..k...ggyrklEaliialvlvialsFiaelflvk.pdwgevlkglvvPslpg..keslllavgilGatvmphnlflhsslvqerkitid 191
                 +vl++l++   +   +g r +E+++ +lvl ++++F ++l l++  ++ge+l+g + Ps +   +  l+ a gilGatvmph l+l s lvq r ++ d
  KHJ31376.1 266 DVLFILLFYnpNgsmKGLRAFEFFVTCLVLGVVVCFCLQLSLIRnSSLGEILRGYL-PSKELteSTGLYQACGILGATVMPHSLYLGSGLVQPRLQEYD 363
                 ***9999963332225799*********************98862578******99.***999999**************************9997665 PP

       Nramp 192 r..................seke.......ealkyeriDtiial.ivaflinlailivaAavlysggkdvesledaaeaLepllGskaasvlFaigLla 264
                                       +         lk++ ++ +++l i+a+++n+aili+a a ly + +d ++l++++++L+  l+ ++a ++Fa++Ll 
  KHJ31376.1 364 InhgiisapidsnardkeaY--KpslqairGCLKMFVVELTLSLfIFALFVNSAILITAGASLYGTDVDDADLFGIHRLLSTSLS-PMAGTVFALALLL 459
                 588********988765550..0555456678999*********999*****************999999***************.7************ PP

       Nramp 265 aGlsStitgtlagqyvmegflglrislwlrrlitralafvpalivilligaelelvkllvlsqvllslllPfaliplllltsskklMG 352
                 +Gls+ i+gt++gq+v eg+l++ i++wlrrlitr +++ p ++v++++g+++  +++l +sqv+ls++lPf+++p++ +t + + M 
  KHJ31376.1 460 SGLSAGIVGTISGQMVSEGALNWTIRPWLRRLITRTISIAPSILVAAAVGKQGL-NDVLNASQVVLSVVLPFITAPIIFFTCRNRYMT 546
                 *****************************************************9.*****************************9995 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 0.38
       Nramp  55 kvsillwilaelaiia 70 
                 ++++++w+++ ++++a
  KHJ31376.1 580 TFAVIIWLIIAIMNVA 595
                 2333334444444333 PP

>> Ndc1_Nup  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.9   4.8e-05      0.43      21     105 ..     258     345 ..     243     364 .. 0.73
   2 ?   -0.4   0.9     0.039   3.5e+02     177     210 ..     513     547 ..     439     603 .. 0.57

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 4.8e-05
    Ndc1_Nup  21 lslllslsssllwswfplgp....aglralllflsllpilvlrkaqlhvgprttssrlstllaslfslqtletllvyllSallfaevyi 105
                 + ++ls+ + l + ++ ++p     glra+ +f+ +l+++v+ +  l       ss  + l+++l s+++ e+++ y ++++l a+v+ 
  KHJ31376.1 258 IGCALSIIDVL-FILLFYNPngsmKGLRAFEFFVTCLVLGVVVCFCLQLSLIRNSSLGEILRGYLPSKELTESTGLYQACGILGATVMP 345
                 44444442222.2233333345599********999888888888787777888999************************98877764 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.039
    Ndc1_Nup 177 lpsilkksl.ilslvlllvspiiyylllrsfiwsl 210
                 l  +l  s  +ls+vl +++  i+++ +r +  ++
  KHJ31376.1 513 LNDVLNASQvVLSVVLPFITAPIIFFTCRNRYMTV 547
                 44444444434444444333333244444433331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (604 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 4702.87
//
Query:       KHJ31377.1  [L=903]
Description: hypothetical protein EV44_g1837 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.091   12.8   1.0       0.27   11.3   0.3    2.1  2  DUF5389    Family of unknown function (DUF5389)
        0.2   11.8   0.7       0.48   10.6   0.7    1.6  1  YbgT_YccB  Membrane bound YbgT-like protein


Domain annotation for each model (and alignments):
>> DUF5389  Family of unknown function (DUF5389)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.3     3e-05      0.27      11      49 ..     472     510 ..     462     528 .. 0.83
   2 ?   -3.1   0.0      0.93   8.3e+03      39      71 ..     773     805 ..     762     814 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3e-05
     DUF5389  11 skfswaialfclPvllwPlallispnllknPalsdtqvk 49 
                 s  s+ i+ fc+ ++lw l+l +  ++l+  ++s   ++
  KHJ31377.1 472 SGGSYIISSFCSRIILWGLSLAVLFAILNHMNISRPAIS 510
                 667899*******************99999999987764 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.93
     DUF5389  39 knPalsdtqvklmsiflwlyPlvlaiiarilyk 71 
                 k  a s+  +++++ f+  y +vl+  + + +k
  KHJ31377.1 773 KKIADSHVALNVVKKFFANYRFVLINASDVHHK 805
                 555567777888888999999998766665555 PP

>> YbgT_YccB  Membrane bound YbgT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.7   5.3e-05      0.48       9      22 ..     489     502 ..     487     504 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 5.3e-05
   YbgT_YccB   9 GvlLAvlfgilnal 22 
                 G++LAvlf+iln +
  KHJ31377.1 489 GLSLAVLFAILNHM 502
                 9***********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (903 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.42
# Mc/sec: 6462.36
//
Query:       KHJ31378.1  [L=133]
Description: putative ubiquinol-cytochrome c reductase complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-27   95.2   7.5      2e-27   95.2   7.5    1.7  2  UCR_hinge       Ubiquinol-cytochrome C reductase hinge protei
  ------ inclusion threshold ------
       0.08   13.2   7.8      0.095   13.0   7.8    1.2  1  PTPRCAP         Protein tyrosine phosphatase receptor type C-
        6.9    4.6  12.7        7.3    4.6  12.7    1.0  1  DNA_pol_phi     DNA polymerase phi


Domain annotation for each model (and alignments):
>> UCR_hinge  Ubiquinol-cytochrome C reductase hinge protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.9      0.97   5.8e+03      28      28 ..      52      52 ..      25      66 .. 0.58
   2 !   95.2   7.5   3.4e-31     2e-27       1      66 []      69     133 .]      69     133 .] 0.98

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.97
   UCR_hinge 28 e 28
                e
  KHJ31378.1 52 E 52
                3 PP

  == domain 2  score: 95.2 bits;  conditional E-value: 3.4e-31
   UCR_hinge   1 DpkeklreeCeekekCkklkkhyeeCveRVksrseaeteedCveelfdlvhcvdhCvapklfkkLK 66 
                 Dpk+ l+eeC++++ C++lk+hy+eCveRV+s +   ++edCvee+f+l+hc+  C+apkl+k LK
  KHJ31378.1  69 DPKDVLEEECKNSKACAPLKHHYDECVERVTSGHG-VENEDCVEEFFHLLHCASTCAAPKLWKALK 133
                 9********************************97.779**************************8 PP

>> PTPRCAP  Protein tyrosine phosphatase receptor type C-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   7.8   1.6e-05     0.095      32      92 ..      19      77 ..      10     125 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.6e-05
     PTPRCAP 32 rWlraraedgeedeeeEdqedeedeeedsedleggeeeaesqeeeqaeseeageeqaleka 92
                 W +++ae  e+ ++eE+ ++ e++e d+ ++ + e  +es+eee++e++   ++++le++
  KHJ31378.1 19 PWTESHAE--EPVKDEEKGSNAEEKEADKLSVADAEAVEESEEEEEEEEDLVDPKDVLEEE 77
                47777765..566666888888888888888888888888888888888888898888655 PP

>> DNA_pol_phi  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6  12.7    0.0012       7.3     642     695 ..      24      80 ..      14     108 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0012
  DNA_pol_phi 642 dedeeddeeeeeeddeededse...edddeeesdedeededdedvdeidelreklae 695
                  + +e  ++ee++++ ee+e ++    d++  e++e+ee+e+++ vd++d l+e+ ++
   KHJ31378.1  24 HAEEPVKDEEKGSNAEEKEADKlsvADAEAVEESEEEEEEEEDLVDPKDVLEEECKN 80 
                  445555666666666666666667667777778888888888889998888877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1332  (0.074293); expected 358.6 (0.02)
Passed bias filter:                      560  (0.0312343); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.29s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 944.41
//
Query:       KHJ31379.1  [L=221]
Description: putative transcription initiation factor subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-19   67.8   0.0    1.4e-18   66.7   0.0    1.6  1  YEATS     YEATS family
    4.8e-05   23.5   0.1    9.7e-05   22.5   0.1    1.5  1  BET       Bromodomain extra-terminal - transcription regulati
  ------ inclusion threshold ------
       0.05   12.9   0.2      0.095   12.0   0.0    1.5  2  DUF3083   Protein of unknown function (DUF3083)


Domain annotation for each model (and alignments):
>> YEATS  YEATS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7   0.0   2.3e-22   1.4e-18       2      79 ..      30     109 ..      29     111 .. 0.88

  Alignments for each domain:
  == domain 1  score: 66.7 bits;  conditional E-value: 2.3e-22
       YEATS   2 hkWtvavrsa.asddl..sefikkVqFkLhetyanptrvvekpPFevtetGwGeFeiqikiffkpeaekpltlehdLklhp 79 
                 ++W++ +  + +  ++  +++++k +++Lh+++anp++++++pPF+++++GwGeF+++i+++ +++   + +++hdL++++
  KHJ31379.1  30 KSWNIEIYLLdEAGNErtANCFTKAVYNLHPSFANPVQTFTSPPFRCENEGWGEFDMTIDLYSTEK-GGKNSITHDLNFSK 109
                 789999999955444345**********************************************66.456899*****987 PP

>> BET  Bromodomain extra-terminal - transcription regulation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.1   1.6e-08   9.7e-05       9      62 ..     159     217 ..     157     219 .. 0.87

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 1.6e-08
         BET   9 eLseeInkLpgeklgrvveIIqere....pelq.sdedEiElDidaldddtLreLekyv 62 
                 +L+e++ kL +++l +vv++I++++     +++  d++E  +D+ +l++  +  L ++v
  KHJ31379.1 159 KLAEGLVKLREDDLLHVVQMIHDNKsedtYTKNdIDQGEFHVDLYTLPEPLVKMLCDFV 217
                 799**********************987633335899************9999999888 PP

>> DUF3083  Protein of unknown function (DUF3083)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.6e-05     0.095     121     153 ..      86     118 ..      83     130 .. 0.88
   2 ?   -3.7   0.0      0.95   5.7e+03       5      29 ..     159     183 ..     158     187 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.6e-05
     DUF3083 121 ltyDlfakekGnketygyklreiadrYkarkce 153
                 +t Dl++ ekG k+++++ l   ++rY+a+++ 
  KHJ31379.1  86 MTIDLYSTEKGGKNSITHDLNFSKNRYEAKHQV 118
                 799*************************99875 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 0.95
     DUF3083   5 elskkvfelaeeleLenvhviandk 29 
                 +l++ + +l e+  L+ v++i ++k
  KHJ31379.1 159 KLAEGLVKLREDDLLHVVQMIHDNK 183
                 6777788888888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1701.07
//
Query:       KHJ31380.1  [L=239]
Description: hypothetical protein EV44_g1232 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-24   86.5   0.0    2.4e-24   86.2   0.0    1.1  1  RraA-like  Aldolase/RraA


Domain annotation for each model (and alignments):
>> RraA-like  Aldolase/RraA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.2   0.0   1.3e-28   2.4e-24       2     149 ..      21     196 ..      20     197 .. 0.81

  Alignments for each domain:
  == domain 1  score: 86.2 bits;  conditional E-value: 1.3e-28
                 HHHHHHCEE-SSBST............B.TT.EES..........EEEEEEEEEESS..............BGHHHHHHHTS--TTEEEEEESTT.SSS CS
   RraA-like   2 advsDalkklggrsg............girplers..........fvGpavTvkvvea.............dnslvkealeeagpgdvlVvdgggdesl 65 
                 +d++Dal kl++ ++            +      +          ++ pa Tv + ++             + ++  + ++  +p+++lVv++ +   +
  KHJ31380.1  21 CDIADALLKLKVPNAgylsnlhlittkN------TtssannapniTIAPASTVIFGPKytsdtealkyqsnKIEAGTHWVDLTPPETILVVSQPEG--Q 111
                 99****6666666666666444332221......023344557877799999999887888887888775433788999************97773..4 PP

                 SSECE-HHHHHHHHHTTBSEEEEEEEES-HHHHTTSSSEEEEEEE-SSB-B-S.STSEESS-EEETTEEE-TTSEEEEET.TEEE CS
   RraA-like  66 raallGgllataakangvaGvvvdGavRDvaelreldfpvfargvtprkkpkkkgkgevnvpveiggvtvkpgdlivaDe.dGvv 149
                 ++a+lGg+la ++k+ g++Gvvv+G+vRD+ el++  +p++++g++ ++   ++++ +++v+++i+g+ + pgdli++D+ +Gv+
  KHJ31380.1 112 NCAVLGGILALRLKKLGAKGVVVSGRVRDILELNSTCLPIWSKGTSVVGAAAESKPLATQVTLNINGTIITPGDLIFCDSlNGVI 196
                 88888*******************************************988887788**********************757776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       390  (0.0217525); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.19s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1948.02
//
Query:       KHJ31381.1  [L=430]
Description: putative 3-ketoacyl-coa thiolase peroxisomal a precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-74  248.7   0.3    8.6e-74  248.2   0.3    1.3  1  Thiolase_N     Thiolase, N-terminal domain
    7.8e-44  148.3   0.2    1.8e-43  147.1   0.2    1.6  1  Thiolase_C     Thiolase, C-terminal domain
  ------ inclusion threshold ------
      0.036   13.6   0.9       0.23   11.0   0.8    2.2  2  ketoacyl-synt  Beta-ketoacyl synthase, N-terminal domain


Domain annotation for each model (and alignments):
>> Thiolase_N  Thiolase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.2   0.3   1.4e-77   8.6e-74       1     260 []      45     300 ..      45     300 .. 0.98

  Alignments for each domain:
  == domain 1  score: 248.2 bits;  conditional E-value: 1.4e-77
                 EEEEEEEEE--EE.TTSTTTTS-HHHHHHHHHHHHHHHHTS-GGGCCEEEEEHSSCTTSTSCHHHHHHHHTTS-TTSEEEEEEHGGGHHHHHHHHHHHH CS
  Thiolase_N   1 vvivsaartpigk.fggslkdlsaeeLlaealkallekagvdpeevdevivGnvlqagegqniarqaalkagipeevpavtvnkvcsSglkavalaaqs 98 
                 +vi +  rtp++k  +g lkd+ a++Ll ealk+l+++ g+dp+ v++++vG vl  g g+++ r+aal+ag+p ++ +  +n++csSgl+a +++a++
  KHJ31381.1  45 IVITACLRTPFTKgGKGGLKDTAASDLLVEALKNLISRSGIDPALVEDIAVGSVLPPGGGATEFRAAALAAGFPVSTSVKSLNRQCSSGLQACVDIANA 143
                 69999********99************************************************************************************ PP

                 HHTTSHSEEEEEEEEESTTS-EEETCTTTTGGSSSSEEEEEHHHHHHTEETTTTSEHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTB CS
  Thiolase_N  99 iaageadvvvagGvEsmsnaptaestdvrsglklgdekakdllipdgladafneehmGltaenlakkykisReeqdefAvkshqkaaaaqkagkFkdei 197
                 i++g +++ +  GvEsms+ +   +++  s+l + + + +++ +p+           G+ +e++ak+ +isR++qdefA++s qka  aq++g F+dei
  KHJ31381.1 144 IKSGMIEIGIGAGVESMSQHYGPGAVSEFSELLQSHPESVNCKVPM-----------GVLSEKMAKDKNISRKAQDEFAASSFQKALHAQNNGLFDDEI 231
                 ******************************************9998...........****************************************** PP

                 E-EEEEESSSEE......EE-S-TTS-TT--HHHHHTS-BSSSTTSS-BTTSB--BEEEEEEEEEEEHH CS
  Thiolase_N 198 vPvkvkgkkgkk......tvdkdeairsevtaekLaklkpaFkkeGtvtAgnasqisDGaaavllmses 260
                  P+kvk ++ k+      +v+kd++irs+vt+e+L+k++paF  +G ++Agnasq+sDGaaavl+m++s
  KHJ31381.1 232 APLKVKWEDPKTgetkdlVVSKDDGIRSGVTVESLSKIRPAFATDGCIHAGNASQVSDGAAAVLFMKRS 300
                 ******999885578899************************************************985 PP

>> Thiolase_C  Thiolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.1   0.2     3e-47   1.8e-43       2     120 ..     308     426 ..     307     429 .. 0.97

  Alignments for each domain:
  == domain 1  score: 147.1 bits;  conditional E-value: 3e-47
                 --SEEEEEEEEEE--GGGGGGHHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHHHHT--GGGBSTT--HHHH-B-TTTHHHHHHHHHHHHHHHC CS
  Thiolase_C   2 kplakirsyaevgvdpeilglgPayaikkvlkkagltvedidlfEinEAFaaqaLavakaldldlekvNvnGGaialGHPlGasGaRivvtllselkke 100
                 k+++k+++ ++ gv p  +g+gP  ai+kv +k+glt +d+d+fEinEAFa+q+L +a++l+ld +k+N +GGaia GHPlG++GaR+v tll+ l+++
  KHJ31381.1 308 KIIGKYVAASVIGVAPLLMGTGPWAAIPKVFEKTGLTKDDVDIFEINEAFASQCLWCARELGLDFNKINPQGGAIAFGHPLGCTGARQVSTLLYGLRRN 406
                 6778999999***************************************************************************************** PP

                 TTSEEEEEEEETTTEEEEEE CS
  Thiolase_C 101 ggklgvaalCigggqgvalv 120
                 gg++gv+++C g+g+g+a+v
  KHJ31381.1 407 GGRVGVTSMCVGTGMGMAAV 426
                 *****************987 PP

>> ketoacyl-synt  Beta-ketoacyl synthase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.12   7.4e+02      89     119 ..      69      99 ..      65     125 .. 0.81
   2 ?   11.0   0.8   3.9e-05      0.23     174     223 ..     129     179 ..      98     188 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.12
                    HHHHHHHHHHHHHHHTS-HHTCTTGGEEEEE CS
  ketoacyl-synt  89 qrllleaawealedagltpeeldgsrvgvfi 119
                    + ll+ea ++ + ++g++p+ +++ +vg ++
     KHJ31381.1  69 SDLLVEALKNLISRSGIDPALVEDIAVGSVL 99 
                    56899**************887777777765 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 3.9e-05
                    GGGHH.HHHHHHHHHHHHTTS-SEEEEEEEE---SHHHHHHHHHTT.BB-TT CS
  ketoacyl-synt 174 ACsSs.lvavhaavqslrsgeadvalaGGvellltpeavagfsaag.llspd 223
                     CsS+  + v+ a ++++sg +++ +  Gve + ++ + ++ s+   ll+++
     KHJ31381.1 129 QCSSGlQACVDIA-NAIKSGMIEIGIGAGVESMSQHYGPGAVSEFSeLLQSH 179
                    6****55556666.******************99888777777776666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       385  (0.0214736); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.37
# Mc/sec: 3455.17
//
Query:       KHJ31382.1  [L=540]
Description: putative glycerol kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-69  231.9   0.3    9.1e-69  231.2   0.3    1.4  1  FGGY_C    FGGY family of carbohydrate kinases, C-terminal dom
    3.1e-63  213.6   0.0    4.3e-63  213.1   0.0    1.2  1  FGGY_N    FGGY family of carbohydrate kinases, N-terminal dom


Domain annotation for each model (and alignments):
>> FGGY_C  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.2   0.3     1e-72   9.1e-69       1     197 [.     292     483 ..     292     484 .. 0.98

  Alignments for each domain:
  == domain 1  score: 231.2 bits;  conditional E-value: 1e-72
      FGGY_C   1 akvslGTssflll.vgtkpvisehglltpva...gedgkpeyalegsiavagslvawlldnlglreeirdageveeslaelaaaeavadaggvvfvpaf 95 
                 ak+++GT++fll+ vgt+pvis  gll++va   g+  kp+yalegs+avags v++l++n g+     ++++v ++la     e+v+d+ggvvfv+af
  KHJ31382.1 292 AKNTYGTGCFLLYnVGTQPVISNSGLLATVAydfGPSHKPVYALEGSVAVAGSGVKFLIENMGF---TTHSSKV-SDLA-----ETVTDNGGVVFVTAF 381
                 79*****************************999888***************************...8899999.****.....9************** PP

      FGGY_C  96 sglrapywdpdargtitglsssttlahiarAaleavalqlrailealekdsgkpldrlavdGGgskndllmqllAdilgvpVerpktaeatalGaAilA 194
                 sgl+apyw +da+gti+g++++t+ +hi+rA+lea+++q++ail+a+ekdsg+++++l vdGG+s++dl+mq++Adi+ + V+rpk++e+talGaA + 
  KHJ31382.1 382 SGLFAPYWIDDAKGTIFGITAHTERGHITRAVLEATCFQTKAILDAMEKDSGQKFESLSVDGGMSNSDLCMQIQADIIRILVDRPKMRETTALGAAFAS 480
                 ************************************************************************************************999 PP

      FGGY_C 195 ava 197
                 ++a
  KHJ31382.1 481 GLA 483
                 887 PP

>> FGGY_N  FGGY family of carbohydrate kinases, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.1   0.0   4.8e-67   4.3e-63       2     245 .]      29     283 ..      28     283 .. 0.95

  Alignments for each domain:
  == domain 1  score: 213.1 bits;  conditional E-value: 4.8e-67
                 EEEEEEESSEEEEEEEETTS-EEEEEEEE--EB-SSTT--EE-HHHHHHHHHHHHHHHHHHC...T.-GCCEEEEEEEE-SS-EEEEETTT.EESSEEE CS
      FGGY_N   2 ilglDcGttstkaivldekgkvvasaqaelelsspkegwaeqdpeeiwqalaeairkvleqa...gisekqikaIgisgqreglvllDknd.kpLynai 96 
                 i ++DcGtts++++++ ++g+ va  q+el  + +++gw+e+dp e+  ++  +i+k+ e+    g s +qik Igi++qre+++ +D ++ +pLynai
  KHJ31382.1  29 IGSIDCGTTSSRFLIFGKDGNPVATYQVELRNIHKSPGWHEHDPFELVSSVEICIEKATEAFiriGYSRNQIKSIGITNQRETTICWDTQTgEPLYNAI 127
                 678*********************************************************9999999******************************** PP

                 -TT--TTHHHHHHHHHTTCHCCHHHHHSS-SSTTSHHHHHHHHHHHSCCHHCCHC....EEEEHHHHHHHHHCT.....--EEEHHHHCTTTSEETTTT CS
      FGGY_N  97 lwkdrrtaeiveklkeegnekklyektglvlstgftlsklkWlkenepevfekie....kflliddyLiwrLtg.....qfvtdvtnasesmlfnikkl 186
                 +w+d+rt++iv++lk++++++kl +  gl++st+ + +kl Wl +n   v ++ +     f+++d++Li+ L g     ++vtd tnas++m++ni++l
  KHJ31382.1 128 VWSDTRTKSIVRELKKQIGADKLLQLCGLPISTYPSSVKLLWLIRNIDTVTAAYKkgnlSFGTVDSWLIFNLNGgkkagVHVTDTTNASRTMFMNINTL 226
                 ****************************************************99999999*************999999******************** PP

                 EE-HHHHHHTT--GG..GS-EEE-TCCEEEEEECCCCCCTT.S-EEEEEEEEEHHHHHHHH CS
      FGGY_N 187 ewdeellailgipee..lLPklvesseiigelkpelaaklGlkegvpvvggggDqqaaalG 245
                 ++d++ll+++ i+++   LPk+v+ss   +      + ++G  +g+ + g++gDq+aa++G
  KHJ31382.1 227 QYDDKLLDFFKISRKniSLPKIVPSSDRDAF----GKLATGTLKGIKITGCLGDQSAALVG 283
                 **************9999*******986433....344556677899************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       564  (0.0314574); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.38
# Mc/sec: 4310.83
//
Query:       KHJ31383.1  [L=505]
Description: putative glycosyltransferase family 15 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-95  319.4   9.5    1.3e-94  317.2   9.5    1.8  1  Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase


Domain annotation for each model (and alignments):
>> Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  317.2   9.5     7e-99   1.3e-94      43     324 ..     101     423 ..      89     424 .. 0.91

  Alignments for each domain:
  == domain 1  score: 317.2 bits;  conditional E-value: 7e-99
  Glyco_transf_15  43 lvnrgrkPie.denenAtllalvrnselakilrsikkvekrFnkkfnYpyvfindepftekfkekieklveeadvefgeipkeewsyPefidee 135
                      +v+   +P + +   nA++++l+rn+el  +++s+k++e++Fn+ ++Ypyvf+nd++f+++fke++ ++++ + +efg+i ++ w +P++id +
       KHJ31383.1 101 FVKGCLEPDTsQPRANAAFVVLARNKELDGVIQSVKSIERHFNRWYHYPYVFLNDKEFNSTFKETVANYTS-SPIEFGTIDPKMWGFPDWIDPK 193
                      445566775546667********************************************************.********************** PP

  Glyco_transf_15 136 kaakareelad..iaygdsesyrhmcRyysGlfykhellkkydyYwRvePdiklycdieyDvfkymkdekkiygFtlslkeieetiktlWdstk 227
                       a++   +  d  i+yg +esy+ mcR+ysG+fykhellkky++YwR+eP+ik +cdi yD f  m + +k ygFt+++ke +et+++++    
       KHJ31383.1 194 VAREGIAKQGDaaIMYGGMESYHAMCRFYSGFFYKHELLKKYEWYWRLEPEIKYFCDITYDPFLKMIEANKTYGFTIAVKELKETVPNIFRYAS 287
                      ***9888887777****************************************************************************99888 PP

  Glyco_transf_15 228 kflke........nkefie.eknslsflsdddqd..............................tynlCeFwsnfeigdldffrseayekfFey 282
                       + +          + fie + + ++  s+dd +                              +yn+C+Fwsnfei++l +frs +ye+fF+ 
       KHJ31383.1 288 AYKRVnnltsqglWEMFIEpQPDEMKQPSEDDPNqklplpeeilrgdpsraslpeidaeamegeKYNMCHFWSNFEIAKLSWFRSREYEDFFQM 381
                      88665224444444555665555566656666559*********************************************************** PP

  Glyco_transf_15 283 lDskGgffYerWgdapvhsiavslllpkdkihffedigyshd 324
                      +D++Ggf+ erWgdap+hs+a+  ll   +ih+f+d gy h+
       KHJ31383.1 382 MDRSGGFWMERWGDAPIHSLAAGALLAPRDIHYFRDFGYRHT 423
                      ***************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       616  (0.0343577); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 3283.80
//
Query:       KHJ31384.1  [L=401]
Description: putative coiled-coil domain-containing protein 55 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-36  124.3  19.0    2.7e-36  124.3  19.0    3.4  3  DUF2040   Coiled-coil domain-containing protein 55 (DUF2040)
  ------ inclusion threshold ------
        1.1    8.9   9.7         17    5.1   5.2    3.2  2  BRD4_CDT  C-terminal domain of bromodomain protein 4


Domain annotation for each model (and alignments):
>> DUF2040  Coiled-coil domain-containing protein 55 (DUF2040)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.3  19.0     3e-40   2.7e-36       2     119 ..     103     215 ..     102     217 .. 0.92
   2 ?   -2.7   1.0      0.66   5.9e+03      77      93 ..     229     245 ..     221     272 .. 0.46
   3 ?   -2.6  11.5      0.61   5.5e+03      40      89 ..     334     386 ..     327     398 .. 0.68

  Alignments for each domain:
  == domain 1  score: 124.3 bits;  conditional E-value: 3e-40
     DUF2040   2 kkeaekaleeDpsvydYDevYDslkeakekkkakkkeekkerkpkYienLlkaaekRkrereraeerklqkereaegdefadkekFVTsaYkkkleelk 100
                 kk+ + a + D+++y+YD+vYDslk+ k++ k     ++k+rkp+Y+ nL++aa++Rkr+ ++aee+klq+er+aegde+adkekFVTsaYkk++ee++
  KHJ31384.1 103 KKHENFARNLDANIYEYDAVYDSLKRTKRELK-----DDKDRKPRYMANLIAAAAVRKRDATIAEEKKLQRERDAEGDEYADKEKFVTSAYKKQQEENR 196
                 67888899*****************8877544.....33478********************************************************* PP

     DUF2040 101 kleeeekrreeeeekkdvt 119
                 +le+ee+ ree ++k++v 
  KHJ31384.1 197 RLEQEERTREELDAKNNVG 215
                 ***************9986 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.66
     DUF2040  77 egdefadkekFVTsaYk 93 
                 e+++ a+  k V +  k
  KHJ31384.1 229 EEKKHAEIVKAVDERLK 245
                 33333333333333333 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 0.61
     DUF2040  40 kkerkpkYienLlkaaekRkrereraeerklq...kereaegdefadkekFVT 89 
                  ++r+++ ie+ l++ +kR  e+e   + k++   k r+ e +    ke++  
  KHJ31384.1 334 MRQRQSRMIEAQLEQVSKRAFEQEEEAKLKIErasKSRKTEAEIMGAKERYLA 386
                 45789999999999999998888876665554111567777777777777754 PP

>> BRD4_CDT  C-terminal domain of bromodomain protein 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   5.2    0.0019        17       3      24 ..     188     209 ..     186     211 .. 0.87
   2 ?    4.4   0.1    0.0032        29       2      16 ..     378     392 ..     377     398 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0019
    BRD4_CDT   3 ldqqRelaRkrEqeRRrreama 24 
                  ++q e  R+ Eqe R re++ 
  KHJ31384.1 188 YKKQQEENRRLEQEERTREELD 209
                 579****************975 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.0032
    BRD4_CDT   2 sldqqRelaRkrEqe 16 
                 +  ++R laRkrE e
  KHJ31384.1 378 MGAKERYLARKREAE 392
                 5689*********88 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2138  (0.119248); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 2950.67
//
Query:       KHJ31385.1  [L=103]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       657  (0.0366445); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.44
# Mc/sec: 703.93
//
Query:       KHJ31386.1  [L=433]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.2e-28   96.3   0.4    7.5e-27   93.4   0.3    2.5  3  CAF1C_H4-bd  Histone-binding protein RBBP4 or subunit C of CA
    1.8e-24   85.6  12.5    1.4e-05   25.7   0.3    6.5  7  WD40         WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.029   14.6   1.7         10    6.7   0.7    2.5  2  Leader_Erm   Erm Leader peptide


Domain annotation for each model (and alignments):
>> CAF1C_H4-bd  Histone-binding protein RBBP4 or subunit C of CAF1 complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.4   0.3   1.3e-30   7.5e-27       1      66 [.      26      95 ..      26      96 .. 0.93
   2 ?   -2.3   0.0      0.95   5.7e+03      38      50 ..     290     303 ..     244     316 .. 0.52
   3 ?   -1.3   0.0      0.44   2.6e+03      47      64 ..     401     415 ..     370     416 .. 0.75

  Alignments for each domain:
  == domain 1  score: 93.4 bits;  conditional E-value: 1.3e-30
                 HHHHHHHHHHHHHEEEEEEEE-SS--S-EEE-S-.B--...-.EEEEEEEE----TTSS-EEEEEEEEEEE CS
  CAF1C_H4-bd  1 eeylewkknapfLYdmlhshslewPsLsfdwlPd.tvs...s.lskqrllvGtqtsgkeqnylyvakvslp 66
                 eey+ wkkn pfLYdm++s++lewPsL+ +w+Pd +     + ++++r+l+Gt+t+ +++nyl++a+v++p
   KHJ31386.1 26 EEYKTWKKNSPFLYDMILSTALEWPSLTTQWFPDfK-EppgKnYTVHRILIGTHTTHGHDNYLQIANVEIP 95
                 7********************************962.346877**************************99 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.95
                  -.EEEEEEEE---- CS
  CAF1C_H4-bd  38 s.lskqrllvGtqt 50 
                  + + ++++l++t +
   KHJ31386.1 290 AfNHTSEYLLATAS 303
                  33334456666655 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.44
                  ----TTSS-EEEEEEEEE CS
  CAF1C_H4-bd  47 Gtqtsgkeqnylyvakvs 64 
                  ++     e+n ++++kv+
   KHJ31386.1 401 CSA---AEDNLIQIWKVA 415
                  444...469999999985 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.2         3   1.8e+04       5      11 ..      78      85 ..      76      92 .. 0.63
   2 ?    0.4   0.0      0.24   1.4e+03      10      38 .]     134     164 ..     129     164 .. 0.75
   3 !   15.4   0.0   4.4e-06     0.026       3      38 .]     178     215 ..     176     215 .. 0.72
   4 !    9.7   0.1   0.00027       1.6       4      34 ..     230     262 ..     227     266 .. 0.80
   5 !   21.8   0.1   4.2e-08   0.00025       8      38 .]     280     312 ..     273     312 .. 0.82
   6 !   25.7   0.3   2.4e-09   1.4e-05       3      38 .]     319     356 ..     317     356 .. 0.94
   7 !   15.4   0.1   4.4e-06     0.026       8      38 .]     381     413 ..     375     413 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 3
                EEEESS.S CS
        WD40  5 rtltGH.s 11
                +t  GH +
  KHJ31386.1 78 HTTHGHdN 85
                66678844 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.24
                 S.SSEEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40  10 H.ssvtslafspdgawlasG.sdDgtvriWd 38 
                 H + v+  +++p +  +++  + Dg + i+d
  KHJ31386.1 134 HpGEVNKARYQPQNINIIATmCNDGRILIFD 164
                 54457777788888888866546*****998 PP

  == domain 3  score: 15.4 bits;  conditional E-value: 4.4e-06
                 EEEEEESS.SS.EEEEEEETTSSE.......EEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ss.vtslafspdgaw.......lasGsdDgtvriWd 38 
                 ++ +l GH s    +l      +w       l++Gs D tvr+Wd
  KHJ31386.1 178 PQIELIGHtSEgF-AL------SWnplepgkLVTGSNDTTVRLWD 215
                 6778889953245.77......44555555889***********9 PP

  == domain 4  score: 9.7 bits;  conditional E-value: 0.00027
                 EEEEESSSS.EEEEEEETTSSEEEEE..ETTSEE CS
        WD40   4 lrtltGHss.vtslafspdgawlasG..sdDgtv 34 
                 +r+++ H+s v++++++pd+a ++ G  sdD t+
  KHJ31386.1 230 TRIYEHHTSvVNDVQYQPDHASII-GtvSDDLTL 262
                 68999997757***********98.645888776 PP

  == domain 5  score: 21.8 bits;  conditional E-value: 4.2e-08
                 ESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawl.asGsdDgtvriWd 38 
                 +GH + +++laf++ + +l a++s D+t+ +Wd
  KHJ31386.1 280 EGHtDAINALAFNHTSEYLlATASHDKTIGLWD 312
                 6**666************7357888*******9 PP

  == domain 6  score: 25.7 bits;  conditional E-value: 2.4e-09
                 EEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 
                 ++++l+GH + vtsl+++p  + ++ sGs+D+ + +Wd
  KHJ31386.1 319 KIHSLEGHiDAVTSLSWHPTEPAILgSGSYDRRIIFWD 356
                 78******999*************99999********9 PP

  == domain 7  score: 15.4 bits;  conditional E-value: 4.4e-06
                 ESS.SSEEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasG.sdDgtvriWd 38 
                  GH ++ ++++++ + +wl+++  +D+ + iW+
  KHJ31386.1 381 GGHtNHLSDFSWNLNEPWLVCSaAEDNLIQIWK 413
                 69*999************9955368*******6 PP

>> Leader_Erm  Erm Leader peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.7    0.0017        10       9      17 ..     138     146 ..     137     149 .. 0.85
   2 ?    6.2   0.0    0.0024        14       8      17 ..     239     248 ..     236     250 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0017
  Leader_Erm   9 inKvRYqPn 17 
                 +nK RYqP 
  KHJ31386.1 138 VNKARYQPQ 146
                 7*******4 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0024
  Leader_Erm   8 vinKvRYqPn 17 
                 v+n v YqP 
  KHJ31386.1 239 VVNDVQYQPD 248
                 99*******7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       307  (0.0171231); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 3200.12
//
Query:       KHJ31387.1  [L=306]
Description: putative peroxisomal -enoyl- isomerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-29  102.3   0.0    3.6e-19   69.1   0.0    2.1  2  ECH_1     Enoyl-CoA hydratase/isomerase
    1.1e-15   58.1   0.0    1.4e-15   57.6   0.0    1.2  1  ECH_2     Enoyl-CoA hydratase/isomerase
  ------ inclusion threshold ------
      0.039   13.8   0.1          5    7.0   0.1    2.2  2  CHD5      CHD5-like protein


Domain annotation for each model (and alignments):
>> ECH_1  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   1.9e-11   1.1e-07       8      64 ..      31      87 ..      24     102 .. 0.88
   2 !   69.1   0.0     6e-23   3.6e-19      68     218 ..     117     270 ..      98     298 .. 0.85

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 1.9e-11
                EEEE--CGCTTEE-HHHHHHHHHHHHHHHHSTTECEEEEEEBTSEEEEEB-HHHHHH CS
       ECH_1  8 viklnrPeavNalsaelltEliqalekleddksvravvLtGgdkaFaaGadlkemae 64
                v  lnrP+ +Na+   l+ E i al  l+++      vLtG +++F+aGad++ + e
  KHJ31387.1 31 VYWLNRPQTLNAFGGDLMIETISALDWLDKNSDTVITVLTGAGRFFSAGADVRSVNE 87
                5569***************************999999**************988765 PP

  == domain 2  score: 69.1 bits;  conditional E-value: 6e-23
                 HHHHHHHCCHHHHHHHHHHSSSEEEEEE-SEEETHHHH.HHHHSSEEEEETTTEEE-GGGGGTS--CTTCHHHHHHHHHHHHHHHHHHHT-EEEHHHHH CS
       ECH_1  68 akqallkeevlelwtklytvpkpviaavnGaaigGGle.lalacDiviaadnasfglnelklGlipgaggtqilarkvGkskAeeilllgkkisaqeal 165
                   + +   +  el++ + +  k+ + a+nG aigGG+  +  ++Div a+ n     +++ lGl+p+ g  +i+ +++G ++A+e l++g+++ a e++
  KHJ31387.1 117 ITYLSHFAPHVELMRSIINHRKVFVVALNGPAIGGGAAwFPGIADIVLASSNCYLQVPFSSLGLVPELGSAPIFSQIMGVHRANEFLMFGRRFDAPELE 215
                 56666667778999**********************864789********************************************************* PP

                 HCTSSSEEESGGGHHHHHHHHHHHHHHSCH.HHHHHHHHHHHHHHH.HHHHHHHH CS
       ECH_1 166 kvGlvdkvvpeeqlleealelaeklaeksp.aalrqlkealnakle.dalaeqle 218
                   Gl ++v+pe +++++  + + +++  s  ++l  +k  +n++l+  +la+++e
  KHJ31387.1 216 ACGLFNRVFPELNFQDHVSQYLSEIIATSDgQSLMEAKRLMNEPLRiGRLAAVME 270
                 ********************99998766542677788888888888777777666 PP

>> ECH_2  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.0   2.4e-19   1.4e-15       3     198 ..      31     252 ..      29     304 .. 0.77

  Alignments for each domain:
  == domain 1  score: 57.6 bits;  conditional E-value: 2.4e-19
                 EEEE--GGGTT-B-HHHHHHHHHHHHHHCC-TT-SEEEEEESSSSECE--B--HHHHHHHHCS....................-TH.H...HHHHHHHH CS
       ECH_2   3 vitLnrpkalNaLslemvralkealkewekddevklvvlkgagekafCAGgDvralyeaakeg....................kke.e...eeffreeY 77 
                 v  Lnrp++lNa   +++ +  +al+  +k++++ + vl+gag + f+AG Dvr++ e+ +++                    + + +    + f+   
  KHJ31387.1  31 VYWLNRPQTLNAFGGDLMIETISALDWLDKNSDTVITVLTGAG-RFFSAGADVRSVNETLTDSnlgvdktrdqvdadgqqvqkT-KeKityLSHFAPHV 127
                 667*************9999999******************99.***************99999******99999988877541.122346779***** PP

                 HHHHHHHC-SS-EEEEE-BEEETHHHHHHTT.SSEEEE-TT-EEE--GGGGT----TTHHHHHHCSST.THHHHHHHH---B-HHHHHHTTS--EE--G CS
       ECH_2  78 klnyliatypkpvvalmdGivmGgGvGlsvh.gsfrvvtertvfAmPEtaIGlfPDvGgsyfLsrlpg.elGlylalTGarlkgadalaaglathyvps 174
                 +l   i + +k +v  ++G ++GgG++   + + +  ++ +  + +P  ++Gl+P+ G   ++s++ g + +  + + G+r+++ ++ a+gl + ++p+
  KHJ31387.1 128 ELMRSIINHRKVFVVALNGPAIGGGAAWFPGiADIVLASSNCYLQVPFSSLGLVPELGSAPIFSQIMGvHRANEFLMFGRRFDAPELEACGLFNRVFPE 226
                 **************************97755278999****************************8776555555588********************9 PP

                 GGH.HHHHHHHHTT.........--- CS
       ECH_2 175 ekl.ealeeaLaelessd.eeaveev 198
                  ++ +++ + L+e+  ++  +++ e+
  KHJ31387.1 227 LNFqDHVSQYLSEIIATSdGQSLMEA 252
                 99834566667776444322222222 PP

>> CHD5  CHD5-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1   0.00084         5      99     128 ..       7      36 ..       3      48 .. 0.84
   2 ?    4.5   0.0    0.0049        29      87     144 ..     105     176 ..      92     186 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00084
        CHD5  99 lkkvllvlttvpqlvlkfwyrktpvfylpk 128
                 +++ +l lt  p++++k  +rk  v++l+ 
  KHJ31387.1   7 ISTSKLYLTLFPTFFFKKKKRKLTVYWLNR 36 
                 66778899999*****************43 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0049
        CHD5  87 elsaskssfkkklkkvllvlttvpqlvlkfwyrktpvfyl.......pkgwfPllvewlls.......lpla 144
                 +  ++ +++k k+++++ ++ +v  +   + +rk  v+ l          wfP ++  +l+       +p+ 
  KHJ31387.1 105 ADGQQVQKTKEKITYLSHFAPHVELMRSIINHRKVFVVALngpaiggGAAWFPGIADIVLAssncylqVPFS 176
                 3445667778889999999999999999999******99988655433349999988888866666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2307.71
//
Query:       KHJ31388.1  [L=607]
Description: putative dwnn domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.7e-32  109.4   0.0    2.1e-31  108.0   0.0    1.8  1  DWNN          DWNN domain
      6e-09   35.6   4.0      1e-08   34.8   4.0    1.4  1  zf-CCHC_2     Zinc knuckle
    8.9e-07   28.7   1.7    1.7e-06   27.8   1.7    1.5  1  zf-CCHC       Zinc knuckle
      0.004   17.3   0.0       0.01   16.0   0.0    1.7  1  U-box         U-box domain
     0.0042   17.0   0.4     0.0099   15.8   0.4    1.6  1  zf-CCHC_3     Zinc knuckle
  ------ inclusion threshold ------
      0.018   14.9   8.2      0.018   14.9   8.2    2.1  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
       0.07   12.2   0.8       0.15   11.1   0.8    1.4  1  Dak1_2        Dihydroxyacetone kinase family
      0.085   12.7   2.8       0.24   11.3   2.8    1.7  1  zf-RING_6     zf-RING of BARD1-type protein
       0.85    9.5   9.2        1.9    8.4   9.2    1.6  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
        1.1    9.4   7.1        2.2    8.4   7.1    1.6  1  zf-RING_UBOX  RING-type zinc-finger


Domain annotation for each model (and alignments):
>> DWNN  DWNN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.0   0.0   1.2e-34   2.1e-31       1      74 []       5      78 ..       5      78 .. 0.99

  Alignments for each domain:
  == domain 1  score: 108.0 bits;  conditional E-value: 1.2e-34
        DWNN  1 vyYkFksqkdyskitfdgtsisvfeLKreIiekkklgkgtdfdLqiynaqtkeeydddselIprntsvivrRvP 74
                v+YkFksqk+ s+i+fdgt+isvfeLKr+Ii k++lg+g dfdL i+n++  eeyddd+++Ipr+t+vi++R+P
  KHJ31388.1  5 VFYKFKSQKEPSRIEFDGTGISVFELKRDIILKSGLGDGADFDLSIFNDDGTEEYDDDTTVIPRSTTVIAQRLP 78
                8************************************************************************9 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   4.0   5.8e-12     1e-08       1      21 []     171     191 ..     171     191 .. 0.97

  Alignments for each domain:
  == domain 1  score: 34.8 bits;  conditional E-value: 5.8e-12
   zf-CCHC_2   1 PpgYvChiCgkkGHyIqdCPt 21 
                 P gYvC +Cg kGH+I++CPt
  KHJ31388.1 171 PLGYVCYRCGEKGHWIKECPT 191
                 88******************8 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   1.7   9.5e-10   1.7e-06       2      17 ..     175     190 ..     175     191 .. 0.94

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 9.5e-10
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +Cy+CGe GH+ ++Cp
  KHJ31388.1 175 VCYRCGEKGHWIKECP 190
                 6**************9 PP

>> U-box  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   5.6e-06      0.01       6      72 ..     285     353 ..     283     354 .. 0.94

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 5.6e-06
                 B-TTT-SB-SSEEEETTT.EEEEHHHHHHHHTT.SSB-TTT.-SB--GGGSEE-HHHHHHHHHHHHHCT CS
       U-box   6 ldpitlelmkdPvilpsg.vvvdrstiekhllsrdktdPft.repltqdqlipnlelKekIdefleekr 72 
                  ++i   +++dP+ +p   +++    i++ l + d t+P    e +  d+li ++++  +I+++leek+
  KHJ31388.1 285 ECSIDKRIFIDPMKTPCCeKTYCNDCITNSLIESDFTCPGCqTEGVLLDDLIHDEAMSLEIQQYLEEKN 353
                 5999*************************99999*****98789999********************97 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.4   5.5e-06    0.0099       6      24 ..     175     192 ..     173     207 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 5.5e-06
   zf-CCHC_3   6 aCQkClkkGHwtYECknag 24 
                 +C +C++kGHw  EC+ ++
  KHJ31388.1 175 VCYRCGEKGHWIKECP-TN 192
                 69*************9.33 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.4      0.78   1.4e+03      23      39 ..     176     191 ..     174     191 .. 0.71
   2 ?   14.9   8.2     1e-05     0.018       1      40 []     285     325 ..     285     325 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.78
  zf-C3HC4_2  23 CqkCilrsLeekneCPl 39 
                 C+ C  +  +  +eCP+
  KHJ31388.1 176 CYRCGEKG-HWIKECPT 191
                 89999984.44668885 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1e-05
  zf-C3HC4_2   1 kCpiCldmlkdpsvvtpCgHvfCqkCilrsLeekn.eCPlC 40 
                 +C i    + dp+ +  C+ ++C++Ci  sL e++  CP C
  KHJ31388.1 285 ECSIDKRIFIDPMKTPCCEKTYCNDCITNSLIESDfTCPGC 325
                 5888899999**9999***********************99 PP

>> Dak1_2  Dihydroxyacetone kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.8   8.2e-05      0.15     174     224 ..     108     158 ..      95     165 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.2e-05
      Dak1_2 174 iptktivqGlaallvfdpersleenveamaeaakavktgevtyAvrdtkid 224
                 +++ t + G+  + +f++++s e+  +am ea ++  +g+++ ++++tk+ 
  KHJ31388.1 108 VKSMTKTAGINGMSQFNSSMSEEQRLAAMFEASSQQWSGQLEEMAKQTKVY 158
                 8899999*****************************************986 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   2.8   0.00014      0.24       8      54 ..     284     333 ..     279     342 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00014
   zf-RING_6   8 lrcsrctdilrepvclggcehifcsncisdcfgs...gcpvcytpawiqd 54 
                 l cs    i+ +p+    ce+ +c +ci++ +      cp c t   + d
  KHJ31388.1 284 LECSIDKRIFIDPMKTPCCEKTYCNDCITNSLIEsdfTCPGCQTEGVLLD 333
                 88999999********************99874313379*9999766555 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   9.2    0.0011       1.9       1      41 []     286     325 ..     286     325 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0011
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 C+i +  + +p+++  C+ ++C++Ci++ l  ++ ++CP C
  KHJ31388.1 286 CSIDKRIFIDPMKTPCCEKTYCNDCITNSLI-ESDFTCPGC 325
                 66667778888877778889***********.9******99 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   7.1    0.0012       2.2       1      39 []     286     323 ..     286     323 .. 0.91

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0012
  zf-RING_UBOX   1 CpIClelftdPlvlp.CGHtFCreClwelskslegafkCP 39 
                   C+I +  f dP+++p C  t+C +C+  + +  e  f+CP
    KHJ31388.1 286 CSIDKRIFIDPMKTPcCEKTYCNDCI--TNSLIESDFTCP 323
                   9999*******7785499********..79999999***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (607 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1247  (0.0695521); expected 358.6 (0.02)
Passed bias filter:                      496  (0.0276647); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.41
# Mc/sec: 4476.99
//
Query:       KHJ31389.1  [L=190]
Description: hypothetical protein EV44_g0518 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.082   12.7   1.1        0.1   12.4   0.1    1.7  2  LacI      Bacterial regulatory proteins, lacI family


Domain annotation for each model (and alignments):
>> LacI  Bacterial regulatory proteins, lacI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.2      0.55   9.9e+03      12      19 ..      57      64 ..      57      64 .. 0.80
   2 ?   12.4   0.1   5.6e-06       0.1      19      41 ..     167     189 ..     165     190 .] 0.93

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 0.55
                -HHHHHHH CS
        LacI 12 SkaTVSrv 19
                Sk+T+S v
  KHJ31389.1 57 SKTTISGV 64
                89999965 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 5.6e-06
                 HCTTSSSSTHHHHHHHHHHHHHT CS
        LacI  19 vLnnkerVseetrerVeaameel 41 
                 v++n+++ s++t+++V+a ++el
  KHJ31389.1 167 VIKNAGSESQATKDKVMALANEL 189
                 999*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       488  (0.0272185); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1409.48
//
Query:       KHJ31390.1  [L=413]
Description: hypothetical protein EV44_g3085 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.4e-11   42.2   0.4    1.2e-10   41.5   0.4    1.3  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.4   6.6e-15   1.2e-10      63     229 ..       3     173 ..       1     182 [. 0.81

  Alignments for each domain:
  == domain 1  score: 41.5 bits;  conditional E-value: 6.6e-15
       RVT_2  63 vrLllalaaeeelvvhqldvdsafLnae..ldeevyvkqPpGfeidreeekvykLnkslyGlkqapllWnekidk.vLkklgferseaesGlyvrgtge 158
                  rLl+ la  +++ ++  d++ a+ +++  l  + yv++P   +    ++   k+   lyG+  a++ W+++ ++   ++l++++s+  + l + +   
  KHJ31390.1   3 QRLLICLALYNDYDIFTRDISQAYTQSKsrLARNFYVRPPIELNLP--NNLLLKVLLPLYGVPEAGTHWFRTYHNhHTENLNLKQSSYDQCLLFNS--- 96 
                 59**********************9764228889******999988..88999****************998766156789************999... PP

       RVT_2 159 gklivalyvddlliagsdikiledvkkelakkfklkdlgkvs.....kfLGieiaqeaggiklsladyiak..vvkkf 229
                  + iv+l  dd lia ++i   ++  +  +++f  kdl ++      +f G +i +  + i +s++d i+k  ++k++
  KHJ31390.1  97 -QAIVGLQTDDTLIACNQIFKSKESEELKKANFAAKDLKQLTnenliTFNGAHISKLKSSIYVSQKDQIKKmsIIKDV 173
                 .88*************9987666666555666666666554311122799*****************99872245554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       880  (0.0490825); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3055.63
//
Query:       KHJ31391.1  [L=430]
Description: hypothetical protein EV44_g3820 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-08   35.2   0.0    2.2e-08   34.3   0.0    1.5  1  rve              Integrase core domain
     0.0013   18.5   0.8     0.0041   17.0   0.1    2.1  2  gag_pre-integrs  GAG-pre-integrase domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.0   2.4e-12   2.2e-08       6     117 ..     116     220 ..     112     222 .. 0.84

  Alignments for each domain:
  == domain 1  score: 34.3 bits;  conditional E-value: 2.4e-12
         rve   6 elwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggve.pervlsDngseytskafrefladlgirvsftrpgrpq 103
                 + + vDv++++    g  + +l+vvd ++r+  a  l+++ ++s++ ++l+ a++    ++ p++++ D g+++ts++fr+++ +l i+ + +++ +p+
  KHJ31391.1 116 HSIFVDVMYID----G--SPILHVVDEATRFQAAKWLKNM-SSSHIWNMLR-ACWIDVYLGpPDIINHDAGTSFTSQEFRQYAMSLSIKTKEAPVESPN 206
                 56788888888....5..68999********999999999.6666666666.4444444444************************************* PP

         rve 104 dnGkvErfhrtlkd 117
                 +   vEr h  l++
  KHJ31391.1 207 TISFVERYHTPLRR 220
                 *********99987 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.23     2e+03      29      34 ..      27      32 ..      26      36 .. 0.85
   2 !   17.0   0.1   4.5e-07    0.0041      20      64 ..      47      96 ..      37      97 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.23
  gag_pre-integrs 29 rRLGHp 34
                     rR+GHp
       KHJ31391.1 27 RRFGHP 32
                     7****9 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 4.5e-07
  gag_pre-integrs 20 nkssinlWHrRLGHpsfsrlkkLfk.........kgllpglkisksevCeaCql 64
                     ++++++  HrR+GHps  +l +L +         +    +l ++ +++C+ Cq+
       KHJ31391.1 47 TETELRTLHRRFGHPSAIKLVNLLDkaghedpqhR----RLLENINKHCDKCQK 96
                     57889999**********99999984333332222....333344789999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       473  (0.0263818); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3276.91
//
Query:       KHJ31392.1  [L=184]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       907  (0.0505884); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1414.99
//
Query:       KHJ31393.1  [L=639]
Description: hypothetical protein EV44_g2967 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (639 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1234  (0.068827); expected 358.6 (0.02)
Passed bias filter:                      566  (0.031569); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4495.01
//
Query:       KHJ31394.1  [L=124]
Description: hypothetical protein EV44_g3092 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00026   20.9   0.1    0.00031   20.6   0.1    1.1  1  Acid_PPase  Acid Phosphatase


Domain annotation for each model (and alignments):
>> Acid_PPase  Acid Phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.1   1.8e-08   0.00031      27     101 ..      34     112 ..      20     120 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 1.8e-08
                 EEE-TTS.-EEETT--EE---TTHHHHHH....HHHHTT--EEEEE--S-HHHHHHHHHHTT-G..........GGESE CS
  Acid_PPase  27 lkkeskksevvDrrgeelklypdveeile....elkskevklavaSrtdepdlarelLklleindakekekklldvfdd 101
                 +++ ++k+e +D++  +l+ly+d +++ +    +  +++ +  v+S  +ep+ ar +++ll+i++  e++++ ++ f++
  KHJ31394.1  34 MRHVHRKNESFDEYLVRLELYDDKNDAAHsallSSVDQDLQKLVCSCDEEPESARVAMRLLKIKNDYETSTSTIESFKK 112
                 55556666999**********9977766632114444***************************999999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       765  (0.0426683); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 864.91
//
Query:       KHJ31395.1  [L=332]
Description: putative class iii [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-18   67.9   0.2    7.7e-18   65.3   0.1    1.8  1  Glyco_hydro_18  Glycosyl hydrolases family 18


Domain annotation for each model (and alignments):
>> Glyco_hydro_18  Glycosyl hydrolases family 18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.3   0.1   4.3e-22   7.7e-18      56     240 ..      49     235 ..       7     261 .. 0.78

  Alignments for each domain:
  == domain 1  score: 65.3 bits;  conditional E-value: 4.3e-22
                     HHHHTSTT-EEEEEEEETTTTT.HHHHHHTSHHHHHHHHHHHHHHH..........HHCT...-SEEEEEES-TTTSTCHHHHHHHHHHHHHHHH CS
                     xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx..........xxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18  56 lkkkknpgvkvllsiGGwtdss.gfslaastdasrkkfadsvvsll..........rkyg...fDGiDidweypggnpedkenytallkelreal 136
                     +k++ + g+ +llsiGG t+s+ gfs++    ++++  ad+v++ +          r++g   +DG+D+d+e       +  n++ ++++l   l
      KHJ31395.1  49 IKCQTKFGKTILLSIGGSTYSEnGFSSM----EAANIAADKVWANFgpltedvsvtRPFGkavVDGFDLDIET------QVLNMVPFVRRLLDHL 133
                     569*****************666*****....4578899999999988888888888888************3......389************* PP

                     H.HHHHHTSTTCEEEEEEESSHHHHHHHCHHHHHHHHTSEEEEETTTSSSTTSSBE--SS-SSBTCSSHHHHH.HHHHHTT--GG..GEEEEEES CS
                     x.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx..xxxxxxxx RF
  Glyco_hydro_18 137 d.kakategkkllLsaavpasasdlskgydlpkiakylDyvnvmtYDfhgswdnvtghhaplydaslnvdeav.keylkagvpak..klvlGvpf 227
                     d    +++ +k+ L+a+++++ +d  ++ +l + + y D ++v++Y+ +   d+++  +a+        ++a+ +++++++ p +   ++lG+  
      KHJ31395.1 134 DiSR-KSDSRKFFLTATPQCPFPDT-NFGPLFDGSIYFDAIWVQFYNNYCGADKFIPGSASQ----PFFNFATwNDWAQRTFPNQdvNIMLGISG 222
                     *665.568888*************4.455888878889************999966666665....6777777689*****99774677777777 PP

                     EEEEEEESSSSSS CS
                     xxxxxxxxxxxxx RF
  Glyco_hydro_18 228 ygrawalvsgadn 240
                       +a  +++ +++
      KHJ31395.1 223 GEKATRTGNISKE 235
                     6666655555333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       631  (0.0351944); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2377.99
//
Query:       KHJ31396.1  [L=139]
Description: putative myosin regulatory light chain cdc4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-09   38.0   0.0    0.00014   22.1   0.0    2.2  2  EF-hand_9   EF-hand domain
    7.8e-09   35.9   0.1    2.9e-05   24.4   0.0    2.1  2  EF-hand_7   EF-hand domain pair
      2e-07   30.4   0.3      0.038   13.9   0.0    3.2  3  EF-hand_6   EF-hand domain
      2e-05   23.8   0.1       0.45   10.2   0.0    3.3  4  EF-hand_1   EF hand
    0.00015   21.5   0.0     0.0016   18.2   0.0    2.3  2  EF-hand_8   EF-hand domain pair
  ------ inclusion threshold ------
      0.051   13.8   0.0      0.099   12.8   0.0    1.5  1  DUF3216     Protein of unknown function (DUF3216)
      0.052   13.9   0.0         12    6.3   0.0    2.4  2  EF-hand_14  EF-hand domain


Domain annotation for each model (and alignments):
>> EF-hand_9  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   5.6e-08   0.00014       3      62 ..       9      62 ..       7      64 .. 0.88
   2 !   13.9   0.0     2e-05     0.051       4      42 ..      81     118 ..      79     132 .. 0.87

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 5.6e-08
   EF-hand_9  3 vFevcDtqktGrVpvsrlidyLravtaqdpeeseLeelakelDPdgedasvdldtflrvm 62
                 F ++D   t rV++  l d+Lra+++ +p+ +e+ el k++ P+       ++tf +++
  KHJ31396.1  9 AFALFDKRGTQRVQLESLGDLLRACGQ-NPTLAEIKELEKNAGPEFD-----FETFSKIL 62
                69*************************.9***********9988654.....88887776 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 2e-05
   EF-hand_9   4 FevcDtqktGrVpvsrlidyLravtaqdpeeseLeelak 42 
                 F+v+D + tG + v +l  +L   ++ + ++ e++el k
  KHJ31396.1  81 FQVFDKEMTGFIGVGQLRYILTNLGE-KMSDEEVDELLK 118
                 9*************************.556667888766 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0   0.00045       1.1       5      45 ..       7      41 ..       3      63 .. 0.75
   2 !   24.4   0.0   1.1e-08   2.9e-05       5      66 ..      77     132 ..      76     136 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00045
   EF-hand_7  5 keaFkelDtdgdgyldkeellrllrkifqgagegsklsdee 45
                keaF ++D++g+ ++  e l +llr+  q+       +  e
  KHJ31396.1  7 KEAFALFDKRGTQRVQLESLGDLLRACGQNP------TLAE 41
                899**********************844443......3333 PP

  == domain 2  score: 24.4 bits;  conditional E-value: 1.1e-08
   EF-hand_7   5 kea.FkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEF 66 
                 +++ F+ +D+  +g++ + +l+ +l+        g+k+sdee+++l+k ++t++ G+i++ ++
  KHJ31396.1  77 YCRgFQVFDKEMTGFIGVGQLRYILT------NLGEKMSDEEVDELLKAVNTSS-GEINYIDL 132
                 6788******************9999......89****************9987.78877665 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   1.5e-05     0.038       3      29 ..       7      32 ..       5      34 .. 0.91
   2 !   12.5   0.0   4.3e-05      0.11       6      31 .]      81     105 ..      78     105 .. 0.94
   3 ?   -0.6   0.0      0.68   1.7e+03      13      22 ..     123     132 ..     112     137 .. 0.56

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.5e-05
   EF-hand_6  3 reaFklfDkdgdGkidaeElrkalrka 29
                +eaF lfDk g+  +  e l ++lr a
  KHJ31396.1  7 KEAFALFDKRGTQRVQLESLGDLLR-A 32
                89**********************9.6 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 4.3e-05
   EF-hand_6   6 FklfDkdgdGkidaeElrkalrkalg 31 
                 F+ fDk+ +G+i   +lr +l+ +lg
  KHJ31396.1  81 FQVFDKEMTGFIGVGQLRYILT-NLG 105
                 99*******************9.776 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.68
   EF-hand_6  13 gdGkidaeEl 22 
                  +G+i++ +l
  KHJ31396.1 123 SSGEINYIDL 132
                 3566655555 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00023       0.6       3      28 ..       7      32 ..       5      33 .. 0.89
   2 !   10.2   0.0   0.00018      0.45       6      28 ..      81     103 ..      76     104 .. 0.90
   3 ?   -2.1   0.0       1.5   3.8e+03      19      26 ..     113     120 ..     108     123 .. 0.65
   4 ?   -0.8   0.0      0.55   1.4e+03      14      19 ..     124     129 ..     112     136 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00023
                HHHHHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1  3 keiFrefDkDgdGkIdfeEfkellkk 28
                ke+F++fDk g+ ++ +e + +ll++
  KHJ31396.1  7 KEAFALFDKRGTQRVQLESLGDLLRA 32
                8*************999999998875 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00018
                 HHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1   6 FrefDkDgdGkIdfeEfkellkk 28 
                 F++fDk  +G+I   +++ +l+ 
  KHJ31396.1  81 FQVFDKEMTGFIGVGQLRYILTN 103
                 9*****************99986 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.5
                 HHHHHHHH CS
   EF-hand_1  19 feEfkell 26 
                  +E+++++
  KHJ31396.1 113 VDELLKAV 120
                 35666655 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 0.55
                 SSEEEH CS
   EF-hand_1  14 dGkIdf 19 
                 +G I++
  KHJ31396.1 124 SGEINY 129
                 566666 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.21   5.4e+02       5      15 ..      53      64 ..      50      75 .. 0.84
   2 !   18.2   0.0   6.4e-07    0.0016       2      37 ..      89     122 ..      88     134 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.21
   EF-hand_8  5 Itreelrril.r 15
                 ++e++++il r
  KHJ31396.1 53 FDFETFSKILnR 64
                699*****9955 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 6.4e-07
   EF-hand_8   2 kgkItreelrrilrilglkkglseeevdilfrefDt 37 
                 +g I +  lr il+ lg k  +s+eevd+l++++ t
  KHJ31396.1  89 TGFIGVGQLRYILTNLGEK--MSDEEVDELLKAVNT 122
                 799**********999*99..************988 PP

>> DUF3216  Protein of unknown function (DUF3216)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.9e-05     0.099      45      78 ..      95     128 ..      76     134 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.9e-05
                 HHHHHHHHHHTTT---HHHHHHHHHHHHHHHHHH CS
     DUF3216  45 GfleGlltvlkekydeekvkellekvkakreele 78 
                 G l  +lt l ek ++e v+ell+ v +   e++
  KHJ31396.1  95 GQLRYILTNLGEKMSDEEVDELLKAVNTSSGEIN 128
                 567789*********************9988875 PP

>> EF-hand_14  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.009        23       6      31 ..      10      35 ..       7      64 .. 0.87
   2 ?    6.3   0.0    0.0047        12       6      51 ..      81     126 ..      80     136 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.009
  EF-hand_14  6 fdlfkdeetdklsvakllkaLaetGi 31
                f lf++++t++++++ l + L+++G 
  KHJ31396.1 10 FALFDKRGTQRVQLESLGDLLRACGQ 35
                899*********************94 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0047
  EF-hand_14   6 fdlfkdeetdklsvakllkaLaetGirkdDpRLkellkklkkveke 51 
                 f++f++e t+ + v +l   L + G + +D  ++ellk+++  + e
  KHJ31396.1  81 FQVFDKEMTGFIGVGQLRYILTNLGEKMSDEEVDELLKAVNTSSGE 126
                 8999*9*********************************9987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1024.04
//
Query:       KHJ31397.1  [L=369]
Description: hypothetical protein EV44_g0036 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.068   13.3   0.8       0.13   12.4   0.8    1.7  1  EF-hand_2  EF hand


Domain annotation for each model (and alignments):
>> EF-hand_2  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.8   7.1e-06      0.13      30     107 ..     243     322 ..     161     340 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.1e-06
   EF-hand_2  30 elcldsvsisivaevlkeiglssdefdrllsvsqledvLldlysale..kkksslgqvkvevcvdlllnwLlnvyDrkrk 107
                 ++c+d+++ + +   ++++ ++ ++  + l++  +++  +++ ++++  + ++ ++  +v+ + +ll nwL  +yD  ++
  KHJ31397.1 243 QICVDLLTNELASILFRHHPVEDNDRASELQILLMIEAYETIQKQIHerAMDPCVTVHHVRYLEQLLENWLDVLYDLYER 322
                 5799*******99*********9999999999999999999988888434455555559***************996544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2647.32
//
Query:       KHJ31398.1  [L=348]
Description: hypothetical protein EV44_g0436 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0026   17.4   0.7       0.69    9.6   0.1    2.3  2  zf-Tim10_DDP  Tim10/DDP family zinc finger


Domain annotation for each model (and alignments):
>> zf-Tim10_DDP  Tim10/DDP family zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.1   3.9e-05      0.69       8      29 ..     107     130 ..     101     148 .. 0.82
   2 !    5.9   0.1   0.00054       9.7      12      40 ..     222     252 ..     219     266 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 3.9e-05
  zf-Tim10_DDP   8 qvanaqelvnkltekCfkkCi..g 29 
                   q+a++ ++v+++++  f kCi  +
    KHJ31398.1 107 QMAQIVDVVSQMNNGYFIKCIrvD 130
                   9********************541 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.00054
  zf-Tim10_DDP  12 aqelvnkltekCfkkCi..gkypgssLdsse 40 
                   +++++ kl  + f kC   +k p+ sLd++ 
    KHJ31398.1 222 IKDVIAKLMHNDFMKCActTKAPDDSLDRNL 252
                   789999***********98778*****9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2602.89
//
Query:       KHJ31399.1  [L=350]
Description: putative meiotic expression up-regulated protein 14 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.8e-124  413.9   0.4   3.7e-124  413.5   0.4    1.1  1  Pil1      Eisosome component PIL1


Domain annotation for each model (and alignments):
>> Pil1  Eisosome component PIL1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  413.5   0.4  2.1e-128  3.7e-124       1     264 [.       1     264 [.       1     265 [. 0.99

  Alignments for each domain:
  == domain 1  score: 413.5 bits;  conditional E-value: 2.1e-128
        Pil1   1 mnraysirsskastasesqteaspksstkskrlfslkslrsslrkqaaasfsPelarrLakLikseknlvraheaaarerksiakqlseWGedtdddvs 99 
                 m+r+ys+r+s+++tas+ q++++p+sstks+rlf+  +++++lr+qaa++f+P+la++L++L+k+ekn++r++e ++rer+++a+q+s WGe +d+dvs
  KHJ31399.1   1 MHRTYSMRQSRTPTASQLQNPPPPTSSTKSGRLFGKGGIGHALRRQAAGQFGPDLAKKLSQLVKMEKNVMRSMELVSRERMEVAQQVSIWGEACDEDVS 99 
                 8************************************************************************************************** PP

        Pil1 100 DvsDklgvllselgeledayadrldqsRatlKsirniEasvqpsRdkkekladeiaklkakepqserlvvlEqeLvraeaeslvaeaqlsnitReklke 198
                 D++Dklgvl++e+geled+y+dr+dq+R+t+KsirniE svqpsR++k+k++d+i +lk+k+ +s +++vlEqeLvraeaeslvaeaqlsnitReklk+
  KHJ31399.1 100 DITDKLGVLIYEIGELEDQYIDRYDQYRVTIKSIRNIELSVQPSRERKQKITDHITQLKYKDSNSSKIMVLEQELVRAEAESLVAEAQLSNITREKLKS 198
                 *************************************************************************************************** PP

        Pil1 199 aytaefdaliEraeKlallarygkrLlellddspvtpGetrpaYdgaeatrqiladaedaLrewrl 264
                 a++++fdal+E++eK+al+a+ygk+Llel+ddspvtpGe+rp Ydg+ea++ i+ d+ed+L++w  
  KHJ31399.1 199 AFAYQFDALREHCEKVALIAGYGKHLLELIDDSPVTPGEVRPRYDGYEASKAIIKDCEDTLTNWVQ 264
                 ****************************************************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1016  (0.056668); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2633.14
//
Query:       KHJ31400.1  [L=676]
Description: hypothetical protein EV44_g4821 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       702  (0.0391544); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4744.36
//
Query:       KHJ31401.1  [L=258]
Description: hypothetical protein EV44_g3499 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-07   30.9   0.0    3.3e-07   30.1   0.0    1.5  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.0   1.8e-11   3.3e-07       3     127 ..      56     184 ..      54     194 .. 0.80

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 1.8e-11
  Retrotran_gag_2   3 kkdakalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsalgv..kiddedkv 94 
                      k+d+  + +I + +sd +++lv+++ t+ e Wd+L ++y  +sa+    l+ ++ s+  +++  v d+++kl e+  +++ +++     ++ + 
       KHJ31401.1  56 KQDKYIRIAISQLVSDVVFHLVNSSYTSEECWDNLRQFYRPNSAQDVDDLLLEFWSFVVEDDIEVDDFVQKLAEIRGRINLIDErsAPAESSMN 149
                      778888999******************************************************************9999999984333444455 PP

  Retrotran_gag_2  95 vllLasLPesyetfvtaies..seedltleeviek 127
                        +L  + + y  f++   +  +++++++++v ++
       KHJ31401.1 150 KRILGHFIKCYGGFYMSTVAslRDSNVSFQSVVSS 184
                      55666666666666555444455566666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       799  (0.0445647); expected 358.6 (0.02)
Passed bias filter:                      593  (0.0330749); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 1986.31
//
Query:       KHJ31402.1  [L=358]
Description: putative beta-ig-h3 fasciclin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.7e-50  169.9   6.3    2.6e-26   92.4   0.9    2.1  2  Fasciclin  Fasciclin domain
  ------ inclusion threshold ------
      0.032   14.3   0.3      0.096   12.8   0.3    1.8  1  Imm2       Immunity protein Imm2
      0.074   12.3   2.8       0.13   11.5   2.8    1.3  1  Zip        ZIP Zinc transporter
       0.13   12.4   0.1        1.1    9.4   0.1    2.2  1  DUF719     Protein of unknown function (DUF719)
        1.1    8.7  11.2        1.8    7.9  11.2    1.3  1  SelP_N     Selenoprotein P, N terminal region


Domain annotation for each model (and alignments):
>> Fasciclin  Fasciclin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.6   0.4   3.1e-26   1.1e-22       2     127 ..      29     166 ..      28     168 .. 0.90
   2 !   92.4   0.9   7.2e-30   2.6e-26       3     126 ..     180     294 ..     178     296 .. 0.94

  Alignments for each domain:
  == domain 1  score: 80.6 bits;  conditional E-value: 3.1e-26
                 GGHHHHHHHHTT.TCCCCCTCSSSSEEEEEE-HHHHCCC.HHHHHHHHHTCHHHHHHHHHTTEEESSS-HHHHHHH.........HEEEECCTTSSEEE CS
   Fasciclin   2 dlstfvslleka.glaeeLnkkdgglTvFaPtneAfakl.ppellakllndkkklkeiLkyHvvpetvsssalkka.........setlatllegaklr 89 
                 ++st+ +ll+++ ++ + L ++++++Tv+aP+n+Af+++ ++++ a+  ++++ ++++L+yHv+++ +++sa+++          ++++++l +g++++
  KHJ31402.1  29 NTSTLNNLLQQQpEVFSSL-ESAKNITVLAPSNAAFEAFlKSDEGANAIHKSDLVANLLTYHVLNGIYKASAFSQFpkfprtlltNSSYTSLKDGQRVK 126
                 789*******999999***.8889************8875666666666799**********************9999999999766677799999*** PP

                 EEEEGGTTEEEETT....EEEEEEEEEEESSEEEEEESS-TS CS
   Fasciclin  90 vniekgngtvtvng....karvvrsdieatngvihvidkvLl 127
                 v+    n++v++++    ++rvv++d  a+ngvih+id+vL+
  KHJ31402.1 127 VQAA--NDSVVITSgslaTSRVVTPDLLASNGVIHIIDSVLV 166
                 ****..999999999**************************5 PP

  == domain 2  score: 92.4 bits;  conditional E-value: 7.2e-30
                 GHHHHHHHHTTTCCCCCTCSSSSEEEEEE-HHHHCCCHHHHHHHHHTCHHHHHHHHHTTEEESSS-HHHHHHHHEEEECCTTSSEEEEEEEGGTTEEEE CS
   Fasciclin   3 lstfvsllekaglaeeLnkkdgglTvFaPtneAfaklppellakllndkkklkeiLkyHvvpetvsssalkkasetlatllegaklrvniekgngtvtv 101
                 l  ++ +l+ka+l+++  ++ ++ TvFaPt++Af++  ++  +kl  dk++lke+L+yHvv++  +s +l ++ + l++  +g++++++++   +++ v
  KHJ31402.1 180 LDSLAGALKKADLVDTV-DDLSSATVFAPTDDAFSAA-SDSISKL--DKSQLKEVLTYHVVDKVQYSIDLADG-SDLKN-INGDDIHIDTD--YDSINV 270
                 567899***********.8889************776.7777888..9*************************.*****.***********..99**** PP

                 TTEEEEEEEEEEESSEEEEEESS-T CS
   Fasciclin 102 ngkarvvrsdieatngvihvidkvL 126
                 n+ a+vv sd+  +ngv+hvid+vL
  KHJ31402.1 271 NS-ANVVISDVLVSNGVVHVIDEVL 294
                 **.*********************9 PP

>> Imm2  Immunity protein Imm2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3   2.7e-05     0.096      14      45 ..     171     202 ..     160     211 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.7e-05
        Imm2  14 ssdkvkryhldiihGllkeiklssvlddlPsd 45 
                  sd  k  hld + G lk   l   +ddl s 
  KHJ31402.1 171 ISDTAKSAHLDSLAGALKKADLVDTVDDLSSA 202
                 589**************************986 PP

>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   2.8   3.5e-05      0.13     133     187 ..     297     347 ..     271     355 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.5e-05
         Zip 133 eeseekedhvaeadtdadskeelrngkqeksesekeqas..eeedkeklaslkvrai 187
                 +++++++ h++++d+d+      ++++ +++++++ + +  +  +  k++++ v+a+
  KHJ31402.1 297 NSNKKGKTHDHKHDHDD------HDDHDNHDHHDHDHDHhsSAGSIVKISRHGVIAL 347
                 34444444444444433......3333333333333333113455667777776665 PP

>> DUF719  Protein of unknown function (DUF719)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   0.00031       1.1      14      78 ..     270     329 ..     208     349 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00031
      DUF719  14 lstAtatvstltVgqgltavkekaesslgipspeelarie.eesseeaeeekeekeeesaekeeke 78 
                 +++A   +s + V++g+ +v++++   l ++s ++ ++++ ++ ++++++++++++++ ++++  +
  KHJ31402.1 270 VNSANVVISDVLVSNGVVHVIDEV---LAVNSNKKGKTHDhKH-DHDDHDDHDNHDHHDHDHD--H 329
                 578888889988999999997774...8888888885444222.2222222222222222111..1 PP

>> SelP_N  Selenoprotein P, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9  11.2   0.00049       1.8     175     211 ..     294     331 ..     270     343 .. 0.52

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00049
      SelP_N 175 paeaeektehehahsh.kqghkhhekhghhHkekeels 211
                  a +++k++++h h+h ++ h  h++h+hh ++++++s
  KHJ31402.1 294 LAVNSNKKGKTHDHKHdHDDHDDHDNHDHHDHDHDHHS 331
                 44444444444444443333333333333333322222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       792  (0.0441742); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 2854.45
//
Query:       KHJ31403.1  [L=311]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       471  (0.0262703); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.36
# Mc/sec: 2577.95
//
Query:       KHJ31404.1  [L=207]
Description: hypothetical protein EV44_g3233 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.027   14.4   0.0      0.041   13.8   0.0    1.3  1  Ferritin  Ferritin-like domain


Domain annotation for each model (and alignments):
>> Ferritin  Ferritin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   2.3e-06     0.041      13      71 ..      28      86 ..      21     108 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.3e-06
                HHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS....SHHHHHH CS
    Ferritin 13 taayqylamawyvkgpgleglaeffdeqaeeerehadklaerilalGgtpvltraelee 71
                + +++y + +++v++ g  gl+   d +  +e + a+    ++++  g+pv+ +++l+ 
  KHJ31404.1 28 DRSLLYQKNHRHVSDFGCYGLHCAVDASFADEYDTAKSTTGYVIFMAGSPVIWKSKLQS 86
                56899*********************************************998888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       471  (0.0262703); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1760.59
//
Query:       KHJ31405.1  [L=133]
Description: putative vacuolar atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-17   64.3  12.7    3.7e-17   62.8  10.9    1.9  2  V-ATPase_G      Vacuolar (H+)-ATPase G subunit
  ------ inclusion threshold ------
      0.019   13.2   0.3      0.021   13.1   0.3    1.0  1  BT1             BT1 family
      0.079   11.4   0.9      0.095   11.1   0.9    1.0  1  SID-1_RNA_chan  dsRNA-gated channel SID-1
       0.27   11.0   3.3       0.44   10.3   3.3    1.4  1  HAD_SAK_1       HAD domain family 1 in Swiss Army Knife RNA r


Domain annotation for each model (and alignments):
>> V-ATPase_G  Vacuolar (H+)-ATPase G subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.11     5e+02       1      11 [.       4      14 ..       4      20 .. 0.83
   2 !   62.8  10.9   8.2e-21   3.7e-17      25     103 ..      42     120 ..      37     122 .. 0.97

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.11
                -HHHHHHHHHH CS
  V-ATPase_G  1 sqsqgIqqLLq 11
                ++s+gIq+LL+
  KHJ31405.1  4 QNSAGIQTLLD 14
                5899******7 PP

  == domain 2  score: 62.8 bits;  conditional E-value: 8.2e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHTS CS
  V-ATPase_G  25 krkakrlkqAkeeAekEieeyrakkekefkekeaeklgseeelekkieketeekikelkesvkknkeavvkellklvld 103
                 ++++kr+k+A++eA+kEi+ y++kke e++++e+e++++++++e+ ++ e+++ki e+ke  +k +++vv+ell++v++
  KHJ31405.1  42 EDRTKRVKEARDEAKKEIDTYKEKKESELRKYESEHSSGNKKAEEVANIEVAKKIVEIKELGNKGQDKVVQELLNAVYE 120
                 679**************************************************************************97 PP

>> BT1  BT1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.3   4.7e-06     0.021     154     230 ..      18      97 ..       8     123 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.7e-06
         BT1 154 risvlvsaalqll.tvvvflfnwygerknrveraeDallikeelrkereslglpakeepdgsrdnadDeeeva....gkriv 230
                 r  v  ++ l  + ++ +f++  y++r  rv+ a D +  + ++ ke+++++l + e++  + + ++ +eeva     k+iv
  KHJ31405.1  18 RENVSCFGYLIHIySLQLFMIHTYEDRTKRVKEARDEAKKEIDTYKEKKESELRKYESE--HSSGNKKAEEVAnievAKKIV 97 
                 555556666555514568999***************99999999999999998888777..556667777777555544444 PP

>> SID-1_RNA_chan  dsRNA-gated channel SID-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.9   2.1e-05     0.095     125     224 ..      22     113 ..      15     125 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.1e-05
  SID-1_RNA_chan 125 lvllvllsfllltllvvivekvresseekrvkessssesaseslesvssavrsesessveeesdydtleeiesdknvirtkkvlvvsdlsrkdkr 219
                      ++++l+ ++ l l+++ ++       e r+k+ ++++++++++ ++ ++  +ese   +e++  +  +++e+ +n+ ++kk++ +++l +k + 
      KHJ31405.1  22 SCFGYLIHIYSLQLFMIHTY-------EDRTKRVKEARDEAKKEIDTYKEK-KESELRKYESEHSSGNKKAEEVANIEVAKKIVEIKELGNKGQD 108
                     56777777777777666664.......222222222333333333333322.2333334466666677777778888899999999999888777 PP

  SID-1_RNA_chan 220 vlekk 224
                     ++ ++
      KHJ31405.1 109 KVVQE 113
                     66555 PP

>> HAD_SAK_1  HAD domain family 1 in Swiss Army Knife RNA repair proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.3   9.9e-05      0.44     118     182 ..       7      77 ..       2     119 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 9.9e-05
   HAD_SAK_1 118 eefesTmeFKq....afledlletyk.sleeitiYedrpkhvkkfkefleklnkkkk.pikaeviqvaels 182
                 + +++ ++FK     +++  l++ y+ +l  i  Yedr k vk+ ++  +k  ++ k + + e+ + ++++
  KHJ31405.1   7 AGIQTLLDFKRrenvSCFGYLIHIYSlQLFMIHTYEDRTKRVKEARDEAKKEIDTYKeKKESELRKYESEH 77 
                 55667778886333369999*****99****************9988766543333322233333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2086  (0.116348); expected 358.6 (0.02)
Passed bias filter:                      648  (0.0361426); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.36
# Mc/sec: 1121.22
//
Query:       KHJ31406.1  [L=246]
Description: hypothetical protein EV44_g4009 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.058   13.2   0.1      0.071   12.9   0.1    1.1  1  TauD      Taurine catabolism dioxygenase TauD, TfdA family


Domain annotation for each model (and alignments):
>> TauD  Taurine catabolism dioxygenase TauD, TfdA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   3.9e-06     0.071     139     210 ..      22     134 ..      14     181 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.9e-06
        TauD 139 Lpeelpellegltavrvyyhyrg.........................................gglrteqelpavdkhprtghpvvrthpvltgrkal 196
                 L +  ++++e l+av + +   +                                         ++ + +q++ +++kh++++ p+++ h+  t  k+l
  KHJ31406.1  22 LHAPFRKFVEDLNAVARRHFESYfngiqstlpqknitttltkkasfaaitailpavpslghlnlHHSKQPQLPNKPHKHKSASAPACNQHKRNTDDKRL 120
                 55666777777777766666666668888888888888888888888888899999999999999999***********************88999999 PP

        TauD 197 lvn.ppfatrieglg 210
                 lv  pp ++++ +++
  KHJ31406.1 121 LVRvPPGHPSL-NMS 134
                 99987777776.444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.36
# Mc/sec: 2069.51
//
Query:       KHJ31407.1  [L=489]
Description: putative calcium calmodulin dependent protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-54  183.5   0.0    1.4e-48  165.6   0.0    2.3  2  Pkinase         Protein kinase domain
    1.8e-30  106.1   0.0    3.2e-28   98.7   0.0    2.2  2  Pkinase_Tyr     Protein tyrosine kinase
    2.3e-10   40.3   0.0      5e-10   39.2   0.0    1.6  2  Kinase-like     Kinase-like
     0.0014   17.5   0.4     0.0021   16.9   0.4    1.5  1  Pkinase_fungal  Fungal protein kinase
  ------ inclusion threshold ------
      0.015   15.3   0.0      0.025   14.5   0.0    1.3  1  APH             Phosphotransferase enzyme family
      0.027   14.1   0.3      0.077   12.6   0.0    1.9  2  FTA2            Kinetochore Sim4 complex subunit FTA2


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   2.5e-06    0.0073       2      45 ..      70     112 ..      69     119 .. 0.84
   2 !  165.6   0.0   4.7e-52   1.4e-48      49     264 .]     151     364 ..     140     364 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 2.5e-06
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHH CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkv 45 
                  ++ ++G+GsfG V  a+ + +++++A+Kk++k++ + ++++++
  KHJ31407.1  70 IVKGEIGHGSFGAVHYAT-DLNKNEYAIKKVSKSRLRRRSRTSI 112
                 57889*************.588999********99888776555 PP

  == domain 2  score: 165.6 bits;  conditional E-value: 4.7e-52
                 HHHHHHHSCTTB--EEEEEEE..SSEEEEEEE--TTEBHHHHHH..HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGT CS
     Pkinase  49 ikilkklkhpnivrlyevfee..kdelylvleyveggeladlle..rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFG 143
                 +++ +k++hpni++l+ev+ +  +d+ly+vley+++g ++++    +    s+e+++ +++q+++gle+lH++gi+HrD+KpeN+L+ ++++lKi+DFG
  KHJ31407.1 151 LEVARKVNHPNILQLIEVLDDpeEDSLYMVLEYCMKGVITEVAIgeKANPQSPENCRIWFRQMVSGLEHLHENGIVHRDIKPENLLLTKDNVLKIADFG 249
                 6899****************98899************99998876444459999********************************************* PP

                 TSEESSSSCS..BCTTTSCGGGS-HHHH.TTSCB..SHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHH CS
     Pkinase 144 lakelesssk..ltsfvgtseYlAPEvl.keney..skkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseea 237
                  ++ +e++ +    +  g++ + +PE+  ++++y  +k++D+WslGv ly++ +g+ pf+           + +   +++ ++++++k++ + + ++++
  KHJ31407.1 250 DSEIFEKGADmmIFKSAGSPAFTPPELCvRNHGYvsGKAADIWSLGVSLYCIRFGHLPFER--------IGILE---LYEAIKTEELKFDVDPTQEPDF 337
                 *********97666789**********9888888889***********************2........23333...3444556799************ PP

                 HHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 238 kdllkkllkkdpkkRltaeellqhpyl 264
                 ++l+ +ll+kdp+kR  ++e++ hp++
  KHJ31407.1 338 QNLMMRLLDKDPNKRAKIDEIKVHPWI 364
                 **************************7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0     0.004        12       5      45 ..      73     109 ..      70     119 .. 0.71
   2 !   98.7   0.0   1.1e-31   3.2e-28      51     256 ..     150     359 ..     137     361 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.004
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST.TSSHHHH CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlke.eateeek 45 
                   ++G+G+fG V+ +t       ++ + a+K++++ + +++++
   KHJ31407.1  73 GEIGHGSFGAVHYATDL-----NKNEYAIKKVSKsRLRRRSR 109
                  589*********99988.....67778888875404444444 PP

  == domain 2  score: 98.7 bits;  conditional E-value: 1.1e-31
                  HHHHHHTS-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-S CS
  Pkinase_Tyr  51 eakimkklkhpnivkllgvct..keepllivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisD 146
                  ++++ +k++hpni++l+ v    +e++l++v+ey+ +G + +    ++ ++ + ++   +  q+ +G+e+L+++ +vHrd+   N Ll++++v ki+D
   KHJ31407.1 150 DLEVARKVNHPNILQLIEVLDdpEEDSLYMVLEYCMKGVITEVAIGEKANPQSPENCRIWFRQMVSGLEHLHENGIVHRDIKPENLLLTKDNVLKIAD 247
                  678889**************9888888**************998888788889999999999************************************ PP

                  TTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE...EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BBTTSBHHHHHHHHH CS
  Pkinase_Tyr 147 fGLardiekddeyvkkeeaklpvkWmapEslkekk...ftsksDvWsfGvllwEiftlgespypglkneevlekl.kegkrlekpekcpeelyelmkk 240
                  fG ++  ek     +  ++  +  +++pE   +++     +++D+Ws Gv l+ i   g+ p++++   e++e++ +e+ + +   + ++++++lm++
   KHJ31407.1 248 FGDSEIFEKG-ADMMIFKSAGSPAFTPPELCVRNHgyvSGKAADIWSLGVSLYCIRF-GHLPFERIGILELYEAIkTEELKFDVDPTQEPDFQNLMMR 343
                  **99988555.55555666667789****88777665456799**********8866.*****************5666789999999********** PP

                  HT-SSGGGS--HHHHH CS
  Pkinase_Tyr 241 cweedpeeRptfselv 256
                   +++dp++R+++ e+ 
   KHJ31407.1 344 LLDKDPNKRAKIDEIK 359
                  ***********99985 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.5   4.6e+03      13      44 ..      68      99 ..      64     110 .. 0.76
   2 !   39.2   0.0   1.7e-13     5e-10     154     253 ..     214     311 ..     198     352 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.5
  Kinase-like 13 tlvrgellkkgdrsvvfevkdqetgeplavkv 44
                 +++++  +++g +++v  ++d +++e+   kv
   KHJ31407.1 68 QYIVKGEIGHGSFGAVHYATDLNKNEYAIKKV 99
                 45666678999999999999999998876665 PP

  == domain 2  score: 39.2 bits;  conditional E-value: 1.7e-13
  Kinase-like 154 irlaanLqakglvhgkftvdnllldekgglmlggf..taLvragtkvvl..sevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclk 247
                  +    +L+++g+vh +++++nlll ++  l++ +f  ++++ +g+ + +  s    +f PpEl+ +  gy          + d W lG++ y i   +
   KHJ31407.1 214 VSGLEHLHENGIVHRDIKPENLLLTKDNVLKIADFgdSEIFEKGADMMIfkSAGSPAFTPPELCVRNHGYVS------GKAADIWSLGVSLYCIRFGH 305
                  555679*****************************44479999*999997666669**********888766......6778**************** PP

  Kinase-like 248 lPltla 253
                  lP++ +
   KHJ31407.1 306 LPFERI 311
                  **9875 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.4   7.1e-07    0.0021     310     343 ..     208     240 ..      18     262 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 7.1e-07
  Pkinase_fungal 310 ealrDaIkghrsLflkagiLHrDiSenNilitds 343
                       +r+ + g++ L+ + gi+HrDi  +N+l+t +
      KHJ31407.1 208 IWFRQMVSGLEHLH-ENGIVHRDIKPENLLLTKD 240
                     568999********.****************943 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   8.3e-06     0.025     158     196 ..     218     251 ..     195     271 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 8.3e-06
                 HH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 158 allpgelptvllHgDlhpgNllvdpddgrvtGviDfeda 196
                 ++l+   + +++H+D++p Nll++  ++ v  + Df+d+
  KHJ31407.1 218 EHLH---ENGIVHRDIKPENLLLT--KDNVLKIADFGDS 251
                 4455...899**************..4444469999986 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.8   5.3e+03      41      51 ..      87      97 ..      62     116 .. 0.70
   2 ?   12.6   0.0   2.6e-05     0.077     178     204 ..     210     236 ..     174     251 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.8
        FTA2 41 vkirgkeYALK 51
                 + +++eYA+K
  KHJ31407.1 87 TDLNKNEYAIK 97
                56778899998 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 2.6e-05
        FTA2 178 lpkllrdlkklhklgIvvrDlkeenyi 204
                 ++++++ l+ lh+ gIv+rD+k+en++
  KHJ31407.1 210 FRQMVSGLEHLHENGIVHRDIKPENLL 236
                 799*********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       805  (0.0448993); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 3369.47
//
Query:       KHJ31408.1  [L=638]
Description: putative g2 mitotic-specific [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.4e-44  148.4   0.2      2e-43  147.2   0.2    1.7  1  Cyclin_N  Cyclin, N-terminal domain
    2.4e-36  124.4   0.2    1.2e-35  122.2   0.0    2.3  2  Cyclin_C  Cyclin, C-terminal domain
  ------ inclusion threshold ------
      0.071   12.8   0.1       0.16   11.6   0.1    1.5  1  DUF2937   Protein of unknown function (DUF2937)


Domain annotation for each model (and alignments):
>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.2   0.2   3.3e-47     2e-43       1     126 [.     355     480 ..     355     481 .. 0.99

  Alignments for each domain:
  == domain 1  score: 147.2 bits;  conditional E-value: 3.3e-47
                 HHHHHHHHHHCHTS-STTCTTCTSSS-HHHHHHHHHHHHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHSSS---HHHHH CS
    Cyclin_N   1 dilknlieqelkflpkpdyldqqpelnpemRailidwlvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKveeisppkledlv 99 
                 +i+ +++e e+k+lp+ +y+d q+e++++mR++l+dwl++v+++f+l petlfl+vny+dRfls+k+v+  klqlvgat++++AaK+eei++p+++++v
  KHJ31408.1 355 EIFAYMRELEIKMLPNAHYMDLQTEIQWSMRSVLMDWLIQVHHRFSLLPETLFLCVNYVDRFLSSKIVSLGKLQLVGATAIFVAAKYEEINCPSVDEIV 453
                 79************************************************************************************************* PP

                 HHTTTSS-HHHHHHHHHHHHHHTTT-- CS
    Cyclin_N 100 yitdeafteeeilemErliLetLnfdl 126
                 y++d+ +t +eil++Er +L+ L+f+l
  KHJ31408.1 454 YMVDGGYTVDEILKAERFMLNMLQFEL 480
                 *************************98 PP

>> Cyclin_C  Cyclin, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1      0.95   5.7e+03      90     112 ..      67      88 ..      58      95 .. 0.72
   2 !  122.2   0.0     2e-39   1.2e-35       1     116 [.     483     595 ..     483     598 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.95
                 HHHHHGSS--HHCCCCTCGGGCC CS
    Cyclin_C  90 lssapssklqavrrkyssskfhk 112
                 l s+++  l+ +++ ++ss++++
  KHJ31408.1  67 L-SNSQDDLRRTQNEFKSSDIQE 88 
                 3.577888888999999988776 PP

  == domain 2  score: 122.2 bits;  conditional E-value: 2e-39
                 --HHHHHHHHHCCSSHT.-HCCHHCHHCHHHHHHCSCCHCCS-HHHHHHHHHHHCCHHHHS--S-HHHHHHC---HHHHHHHHHHHHHHHHHHHGSS-- CS
    Cyclin_C   1 ptplsFlrrflkaadasedselrtlakylleltlldydflsyppSliAaaalllarstlnspewtetlehytgyskedlkpcvelilellssapssklq 99 
                 p p+sFlrr +ka+++  d e+rtlaky+le+t++d +f++ ppS iAa++ + ar  l++++wt++++hy+gy++ +l+p+v +i+e++ + p+++++
  KHJ31408.1 483 PGPMSFLRRVSKADEY--DLETRTLAKYFLEVTIMDERFVGSPPSYIAAGSHCFARLLLRKGDWTKQHVHYSGYTWTQLRPLVAMIKECC-EFPQEHHN 578
                 88***********999..99**********************************************************************.99****** PP

                 HHCCCCTCGGGCCCGGS CS
    Cyclin_C 100 avrrkyssskfhkvstl 116
                 av++kys++k+++++++
  KHJ31408.1 579 AVFEKYSDRKYKRAAQF 595
                 *************8876 PP

>> DUF2937  Protein of unknown function (DUF2937)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   2.8e-05      0.16      36      84 ..      39      87 ..      27      97 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.8e-05
     DUF2937 36 delkrqlagfqatAkrffkgdlealiahyrqsedpvvradaesiqalve 84
                + ++  + g++atAkr+  gd+++ ++ +++s+d+  r++ e +++ ++
  KHJ31408.1 39 QMATLPVGGLKATAKRTAFGDVSNTVKNLSNSQDDLRRTQNEFKSSDIQ 87
                556667899***************************9999998888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (638 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1236  (0.0689386); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 4541.03
//
Query:       KHJ31409.1  [L=293]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.14   11.8   0.1       0.32   10.7   0.1    1.6  1  EMC3_TMCO1  Integral membrane protein EMC3/TMCO1-like
       0.52   10.2   2.8       0.76    9.6   1.1    2.1  2  DUF728      Protein of unknown function (DUF728)


Domain annotation for each model (and alignments):
>> EMC3_TMCO1  Integral membrane protein EMC3/TMCO1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   3.5e-05      0.32      23      93 ..      27     111 ..      25     121 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 3.5e-05
  EMC3_TMCO1  23 vgiltgllsellqkllidkkkmeke.qkrekelqkrarelqk.............ngdklklkklekrqeelmedqsemmmdqmk 93 
                 ++i+t+++s++ + ll++k+  eke  ++ ++++++a++l               + + lk k++ + +  ++++  + ++ ++k
  KHJ31409.1  27 LSICTSVISNIESTLLVYKNDIEKEeADLVRNYLQQAIALLAasdnapksppiphQTKPLKSKSVSQGKDIIKNKALNHSSTTLK 111
                 69******************99887578999999999999997777777777777666777777777666666666665555555 PP

>> DUF728  Protein of unknown function (DUF728)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   1.1   8.5e-05      0.76      84     117 ..      93     126 ..      80     154 .. 0.88
   2 ?   -1.2   0.0      0.18   1.6e+03      96     110 ..     178     192 ..     158     198 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 8.5e-05
      DUF728  84 iwkqirrnqaenmsatakkshnsktskkkfkedr 117
                   k+i +n+a n s+t+ ksh+   s+k + ed+
  KHJ31409.1  93 QGKDIIKNKALNHSSTTLKSHKESQSRKSIPEDH 126
                 56899***********************999985 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.18
      DUF728  96 msatakkshnsktsk 110
                  s  akks+  kt  
  KHJ31409.1 178 NSKNAKKSYAEKTDS 192
                 345566666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       927  (0.0517039); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2256.40
//
Query:       KHJ31410.1  [L=223]
Description: putative at hook motif-containing [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       365  (0.0203581); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1816.78
//
Query:       KHJ31411.1  [L=532]
Description: putative cutinase g-box binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.5e-12   45.5  14.6    3.8e-06   27.0   2.4    2.8  2  zf-C2H2       Zinc finger, C2H2 type
    1.6e-08   34.6  12.3    0.00051   20.6   1.1    2.9  2  zf-C2H2_4     C2H2-type zinc finger
    1.1e-07   32.0  13.9    1.9e-06   28.0   5.9    3.4  3  zf-H2C2_2     Zinc-finger double domain
    1.7e-05   25.0   6.7     0.0031   17.8   1.6    2.6  2  zf-C2H2_jaz   Zinc-finger double-stranded RNA-binding
    0.00023   21.4   6.7    0.00055   20.2   0.5    2.7  2  zf-met        Zinc-finger of C2H2 type
     0.0062   16.2   6.0      0.092   12.4   0.8    2.4  2  zf_C2H2_ZHX   Zinc-fingers and homeoboxes C2H2 finger domain
  ------ inclusion threshold ------
      0.012   15.6  12.8       0.04   13.9   2.1    2.4  2  zf-C2H2_6     C2H2-type zinc finger
      0.034   13.9   5.9        2.5    7.9   0.1    2.5  2  zf-C2H2_11    zinc-finger C2H2-type
       0.15   11.7   3.7        3.9    7.2   0.3    2.5  2  zf_UBZ        Ubiquitin-Binding Zinc Finger
       0.18   12.3  13.5       0.61   10.6   1.8    3.0  3  zf-C2HE       C2HE / C2H2 / C2HC zinc-binding finger
       0.27   11.1   5.6       0.67    9.9   5.6    1.6  1  zf-trcl       Probable zinc-ribbon domain
       0.67   10.6   7.4        1.3    9.8   2.1    2.6  2  zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
       0.76    9.8   7.4       0.19   11.8   2.7    2.3  2  zf-BED        BED zinc finger
        0.9    9.6   3.0        2.4    8.2   3.0    1.7  1  HypA          Hydrogenase/urease nickel incorporation, metall
        2.7    8.0   5.0        5.3    7.0   0.8    2.6  2  zf-LYAR       LYAR-type C2HC zinc finger
        8.4    6.6  10.8        4.1    7.6   0.5    2.6  2  Zn-ribbon_8   Zinc ribbon domain


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   4.5   5.2e-08   5.9e-05       1      23 []     409     432 ..     409     432 .. 0.98
   2 !   27.0   2.4   3.4e-09   3.8e-06       1      23 []     438     460 ..     438     460 .. 0.99

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 5.2e-08
                 EEETTTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                 ++C+ C+++Fkr+++LkrH+r+ H
  KHJ31411.1 409 FVCESCNRRFKRQEHLKRHYRSvH 432
                 89*******************999 PP

  == domain 2  score: 27.0 bits;  conditional E-value: 3.4e-09
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 +kC++Cgk F+r++nL +H rtH
  KHJ31411.1 438 FKCHECGKDFSRSDNLSQHARTH 460
                 8*********************9 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   4.2   3.2e-06    0.0035       1      24 []     409     432 ..     409     432 .. 0.98
   2 !   20.6   1.1   4.6e-07   0.00051       1      23 [.     438     460 ..     438     461 .. 0.97

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 3.2e-06
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkthH 24 
                 f C+ C+++F+++++L+rH +++H
  KHJ31411.1 409 FVCESCNRRFKRQEHLKRHYRSVH 432
                 89********************99 PP

  == domain 2  score: 20.6 bits;  conditional E-value: 4.6e-07
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 fkC+ Cgk Fs++++L++H +th
  KHJ31411.1 438 FKCHECGKDFSRSDNLSQHARTH 460
                 8*********************9 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.2     0.012        13      13      26 .]     407     420 ..     401     420 .. 0.88
   2 !   28.0   5.9   1.7e-09   1.9e-06       1      25 [.     423     448 ..     423     449 .. 0.92
   3 ?    0.9   0.0      0.62     7e+02       1       9 [.     452     460 ..     452     466 .. 0.89

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.012
   zf-H2C2_2  13 kpyeCplCdkaFkt 26 
                 k + C++C+ +Fk+
  KHJ31411.1 407 KTFVCESCNRRFKR 420
                 5599********96 PP

  == domain 2  score: 28.0 bits;  conditional E-value: 1.7e-09
   zf-H2C2_2   1 nLrrHirk.HtgekpyeCplCdkaFk 25 
                 +L+rH r+ Ht+ekp++C +C+k F+
  KHJ31411.1 423 HLKRHYRSvHTQEKPFKCHECGKDFS 448
                 79*****55****************7 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.62
   zf-H2C2_2   1 nLrrHirkH 9  
                 nL++H r+H
  KHJ31411.1 452 NLSQHARTH 460
                 8******** PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   1.6   2.7e-06    0.0031       2      23 ..     409     430 ..     408     432 .. 0.95
   2 !    9.4   0.3    0.0011       1.3       2      22 ..     438     458 ..     437     461 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 2.7e-06
                  CBBTTTTBBBSSHHHHHCCTTS CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHlkS 23 
                  f C+ C++ Fk ++ l+ H++S
   KHJ31411.1 409 FVCESCNRRFKRQEHLKRHYRS 430
                  88*******************9 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0011
                  CBBTTTTBBBSSHHHHHCCTT CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHlk 22 
                  f C +C K F+ + +l +H +
   KHJ31411.1 438 FKCHECGKDFSRSDNLSQHAR 458
                  99****************955 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.5   4.9e-07   0.00055       1      22 [.     409     430 ..     409     431 .. 0.96
   2 ?    3.7   1.0     0.081        91       1      21 [.     438     458 ..     438     460 .. 0.91

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 4.9e-07
      zf-met   1 fyCelCnvtfnsesqlksHlqG 22 
                 f Ce Cn++f+ + +lk H+++
  KHJ31411.1 409 FVCESCNRRFKRQEHLKRHYRS 430
                 78******************98 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.081
      zf-met   1 fyCelCnvtfnsesqlksHlq 21 
                 f C  C + f+   +l +H +
  KHJ31411.1 438 FKCHECGKDFSRSDNLSQHAR 458
                 78*****************65 PP

>> zf_C2H2_ZHX  Zinc-fingers and homeoboxes C2H2 finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.8   8.2e-05     0.092       4      34 ..     408     438 ..     406     439 .. 0.92
   2 !    7.3   0.4    0.0031       3.5       5      28 ..     438     460 ..     434     470 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8.2e-05
  zf_C2H2_ZHX   4 sFvCveCsfsakkfegLalHNarsHpgetnf 34 
                  +FvC +C+   k+ e L+ H   +H+ e+ f
   KHJ31411.1 408 TFVCESCNRRFKRQEHLKRHYRSVHTQEKPF 438
                  7************************988765 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0031
  zf_C2H2_ZHX   5 FvCveCsfsakkfegLalHNarsH 28 
                  F C eC+    + ++L++H ar+H
   KHJ31411.1 438 FKCHECGKDFSRSDNLSQH-ARTH 460
                  99*****************.6777 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   3.2    0.0072       8.1       2      25 ..     409     432 ..     408     434 .. 0.84
   2 ?   13.9   2.1   3.6e-05      0.04       2      24 ..     438     460 ..     438     461 .. 0.97

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0072
   zf-C2H2_6   2 heCsvCsksFpslqaLggHkksHr 25 
                 ++C  C+++F+ +  L  H +s +
  KHJ31411.1 409 FVCESCNRRFKRQEHLKRHYRSVH 432
                 99**********988888877755 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 3.6e-05
   zf-C2H2_6   2 heCsvCsksFpslqaLggHkksH 24 
                 ++C++C+k F+  ++L  H ++H
  KHJ31411.1 438 FKCHECGKDFSRSDNLSQHARTH 460
                 89*****************9999 PP

>> zf-C2H2_11  zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   1.9    0.0041       4.6       4      28 ..     408     432 ..     406     433 .. 0.93
   2 ?    7.9   0.1    0.0022       2.5       5      24 ..     438     457 ..     435     459 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0041
  zf-C2H2_11   4 tcqCleCGlcftSqlsLsRHlfIvH 28 
                 t+ C  C + f  q  L+RH + vH
  KHJ31411.1 408 TFVCESCNRRFKRQEHLKRHYRSVH 432
                 677*******************999 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0022
  zf-C2H2_11   5 cqCleCGlcftSqlsLsRHl 24 
                 ++C eCG  f+ +  Ls H 
  KHJ31411.1 438 FKCHECGKDFSRSDNLSQHA 457
                 69***********9999996 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.3    0.0035       3.9       2      20 ..     408     423 ..     407     424 .. 0.83
   2 ?    5.3   0.3     0.014        15       3      20 ..     438     456 ..     436     457 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0035
      zf_UBZ   2 tylCerCgkeipeselqEH 20 
                 t++Ce C++++    +qEH
  KHJ31411.1 408 TFVCESCNRRFK---RQEH 423
                 8*********98...5666 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.014
      zf_UBZ   3 ylCerCgkeipes.elqEH 20 
                 + C +Cgk ++ s  l +H
  KHJ31411.1 438 FKCHECGKDFSRSdNLSQH 456
                 89*******9998666666 PP

>> zf-C2HE  C2HE / C2H2 / C2HC zinc-binding finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       6.5   7.3e+03      10      15 ..     337     340 ..     313     370 .. 0.61
   2 ?   10.6   1.8   0.00054      0.61      14      57 ..     385     427 ..     379     430 .. 0.84
   3 ?    9.1   0.8    0.0016       1.8      35      49 ..     435     449 ..     428     460 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 6.5
     zf-C2HE  10 dlpeel 15 
                 +lp  l
  KHJ31411.1 337 ELP--L 340
                 333..3 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00054
     zf-C2HE  14 elekdgeieslseeqskelilktpLkCtrCganfgnkfpkLKeH 57 
                 +l+k ++++++ ++qs+   l + + C +C+ + ++   +LK+H
  KHJ31411.1 385 DLSKTQQVTRRGRKQSETEDLTKTFVCESCN-RRFKRQEHLKRH 427
                 67888888888888988888***********.777788999999 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.0016
     zf-C2HE  35 ktpLkCtrCganfgn 49 
                 ++p+kC+ Cg+ f +
  KHJ31411.1 435 EKPFKCHECGKDFSR 449
                 79********87765 PP

>> zf-trcl  Probable zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   5.6    0.0006      0.67       3      41 ..     407     445 ..     406     452 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0006
     zf-trcl   3 ktltCkdCgaefvFtageQeFyaekgfdnepkRCkaCRk 41 
                 kt++C++C++ f   +   ++y +   + +p +C +C k
  KHJ31411.1 407 KTFVCESCNRRFKRQEHLKRHYRSVHTQEKPFKCHECGK 445
                 89***********************************66 PP

>> zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.1    0.0011       1.3      66     125 ..     370     432 ..     353     433 .. 0.64
   2 ?    4.6   0.4     0.044        50      21      54 ..     426     459 ..     425     488 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0011
  zf-C2H2_3rep  66 aqkknlsasedssqklelsksasve....nnsenesgvrkfvcrfcGlkfdllpdlGrhhqaah 125
                   ++ ++ s  +++s+ ++lsk+++v+    ++se e+ ++ fvc  c  +f+    l rh+++ h
    KHJ31411.1 370 TDTSS-SGVSEKSKLSDLSKTQQVTrrgrKQSETEDLTKTFVCESCNRRFKRQEHLKRHYRSVH 432
                   33222.222223333344444444322335677888899*********************9988 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.044
  zf-C2H2_3rep  21 rhhvqfveqclllqcipcgshfgnaeelwlhvls 54 
                   rh   +  q + ++c  cg  f+ +++l +h  +
    KHJ31411.1 426 RHYRSVHTQEKPFKCHECGKDFSRSDNLSQHART 459
                   66666667778899999********999999754 PP

>> zf-BED  BED zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   1.9     0.071        80      17      43 ..     409     432 ..     404     433 .. 0.89
   2 ?   11.8   2.7   0.00017      0.19       3      38 ..     424     460 ..     422     460 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.071
                 -EETTTTEE----SSTHHHHHHHHHS- CS
      zf-BED  17 avCryCgkilsrgggttnLkrHLrrkH 43 
                  vC  C++ ++r     +LkrH r+ H
  KHJ31411.1 409 FVCESCNRRFKRQ---EHLKRHYRSVH 432
                 58**********9...9*****99999 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00017
                 TTSSS----GGSS--EETTTTEE----.SSTHHHHHH CS
      zf-BED   3 vWkyftpvslkeqkavCryCgkilsrg.ggttnLkrH 38 
                 ++++++ v ++e+  +C  Cgk +sr+ + + + ++H
  KHJ31411.1 424 LKRHYRSVHTQEKPFKCHECGKDFSRSdNLSQHARTH 460
                 579***********************96666666666 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.0    0.0021       2.4      63      95 ..     401     446 ..     377     485 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0021
                 EEEEE--EEEETTTS-EEECHHHHH..............S-TTTSSS CS
        HypA  63 eieevpvkvrCreCgkefeleekal..............rCpkCgsa 95 
                 e e+   ++ C++C+++f+ +e+ l              +C +Cg+ 
  KHJ31411.1 401 ETEDLTKTFVCESCNRRFKRQEH-LkrhyrsvhtqekpfKCHECGKD 446
                 56777888999999999997763.12346889999999999999974 PP

>> zf-LYAR  LYAR-type C2HC zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.2      0.16   1.8e+02       1      15 [.     409     423 ..     409     428 .. 0.76
   2 ?    7.0   0.8    0.0047       5.3       1      18 [.     438     456 ..     438     458 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.16
     zf-LYAR   1 fsCiDCsktFdgdey 15 
                 f C  C+ +F+++e+
  KHJ31411.1 409 FVCESCNRRFKRQEH 423
                 67889*******654 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0047
     zf-LYAR   1 fsCiDCsktFdg.deykaH 18 
                 f C  C+k+F++ d+  +H
  KHJ31411.1 438 FKCHECGKDFSRsDNLSQH 456
                 6799********8999988 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   6.6    0.0036       4.1       6      38 ..     409     449 ..     406     450 .. 0.84
   2 ?    7.6   0.5    0.0036       4.1       6      20 ..     438     452 ..     437     460 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0036
  Zn-ribbon_8   6 YrCeeCghefe.......vlqsisdaplta.CPeCgsevrr 38 
                  + Ce+C+++f        + +s++  +++  C eCg++  r
   KHJ31411.1 409 FVCESCNRRFKrqehlkrHYRSVHTQEKPFkCHECGKDFSR 449
                  89************99998888885555556*****98877 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0036
  Zn-ribbon_8   6 YrCeeCghefevlqs 20 
                  ++C+eCg++f +   
   KHJ31411.1 438 FKCHECGKDFSRSDN 452
                  89********96655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1532  (0.0854482); expected 358.6 (0.02)
Passed bias filter:                      575  (0.0320709); expected 358.6 (0.02)
Passed Vit filter:                        94  (0.0052429); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 3848.93
//
Query:       KHJ31412.1  [L=497]
Description: hypothetical protein EV44_g1592 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0035   17.3   4.8     0.0035   17.3   4.8    2.2  2  zf_CCCH_4  Zinc finger domain
     0.0061   17.2   0.5      0.055   14.2   0.2    2.2  2  Torus      Torus domain
  ------ inclusion threshold ------
      0.011   15.6   2.3      0.011   15.6   2.3    2.0  2  zf-CCCH    Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      0.084   12.7   9.5        0.5   10.2   0.6    2.3  2  zf-CCCH_4  CCCH-type zinc finger


Domain annotation for each model (and alignments):
>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.6      0.72   3.2e+03       1      11 [.     347     359 ..     347     359 .. 0.57
   2 !   17.3   4.8   7.9e-07    0.0035       1      19 []     408     427 ..     408     427 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.72
   zf_CCCH_4   1 Ckfflq..GtCkk 11 
                 C f+++  G C++
  KHJ31412.1 347 CWFWAEsvGGCRY 359
                 7777654455555 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 7.9e-07
   zf_CCCH_4   1 Ckfflq.GtCkkGdkCrFaH 19 
                 C ++++ G C +G++C++ H
  KHJ31412.1 408 CWYWATkGVCGHGTACKYVH 427
                 *******************9 PP

>> Torus  Torus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.24   1.1e+03      69      95 ..     343     372 ..     318     379 .. 0.82
   2 !   14.2   0.2   1.2e-05     0.055      71      91 ..     406     427 ..     396     431 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.24
                 T--B-HHHHH...T--SSGGG-SSB-S--- CS
       Torus  69 esyfClfFar...GlCakGkkCeylHrlPt 95 
                 ++  C f+a    G+ ++ ++C  lH  P+
  KHJ31412.1 343 KTKTCWFWAEsvgGCRYRPEECLNLHVKPK 372
                 567899999666356678899****98887 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 1.2e-05
                 -B-HHHH.HT--SSGGG-SSB- CS
       Torus  71 yfClfFa.rGlCakGkkCeylH 91 
                   C ++a +G+C +G+ C+y+H
  KHJ31412.1 406 RSCWYWAtKGVCGHGTACKYVH 427
                 679999879************* PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.3      0.41   1.8e+03       2      12 ..     343     353 ..     342     359 .. 0.61
   2 ?   15.6   2.3   2.5e-06     0.011       2      26 ..     404     428 ..     403     428 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.41
                 HCHCBCHHHHH CS
     zf-CCCH   2 ktelCrffmrt 12 
                 kt+ C f++++
  KHJ31412.1 343 KTKTCWFWAES 353
                 77777777775 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 2.5e-06
                 HCHCBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH   2 ktelCrffmrtGyCkyGdrCkFaHg 26 
                 k + C +++  G C +G +Ck+ Hg
  KHJ31412.1 404 KPRSCWYWATKGVCGHGTACKYVHG 428
                 788899******************8 PP

>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.6   0.00011       0.5       1      13 [.     345     359 ..     345     359 .. 0.95
   2 ?    6.5   2.8    0.0016       7.2       3      21 ..     408     427 ..     406     428 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00011
   zf-CCCH_4   1 rlCpyfa..kGsCrf 13 
                 ++C+++a  +G+Cr+
  KHJ31412.1 345 KTCWFWAesVGGCRY 359
                 68************9 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0016
   zf-CCCH_4   3 Cpyfa.kGsCrfGdnCrFsH 21 
                 C+y+a kG C  G  C++ H
  KHJ31412.1 408 CWYWAtKGVCGHGTACKYVH 427
                 ******9***********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (497 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3715.08
//
Query:       KHJ31413.1  [L=390]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       694  (0.0387082); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.20s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2973.44
//
Query:       KHJ31414.1  [L=1034]
Description: putative armadillo repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-13   49.4  19.3    2.3e-05   24.3   0.1    8.0 10  Arm              Armadillo/beta-catenin-like repeat
    1.3e-08   34.4   8.3       0.14   12.5   0.1    7.5  8  HEAT             HEAT repeat
    0.00018   21.9  10.5      0.011   16.2   0.1    6.8  9  HEAT_EZ          HEAT-like repeat
    0.00051   20.4   3.5        0.2   12.1   0.2    4.4  3  HEAT_2           HEAT repeats
      0.005   16.4   1.4        1.3    8.5   0.1    3.3  3  CLASP_N          CLASP N terminal
  ------ inclusion threshold ------
      0.015   14.4   0.1      0.057   12.5   0.0    2.0  2  IFRD             Interferon-related developmental regulator (
       0.03   14.2   5.4        5.3    7.0   0.0    4.4  5  DUF3361          Domain of unknown function (DUF3361)
      0.066   13.2   0.8        3.8    7.6   0.0    3.6  3  Atx10homo_assoc  Spinocerebellar ataxia type 10 protein domai


Domain annotation for each model (and alignments):
>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       3.1   6.9e+03       4      21 ..      45      62 ..      42      65 .. 0.78
   2 !    6.2   0.5    0.0051        11      13      41 .]     117     147 ..     114     147 .. 0.87
   3 ?   -2.0   0.0         2   4.4e+03       5      17 ..     210     222 ..     207     224 .. 0.82
   4 ?   -1.7   0.0       1.6   3.5e+03      14      24 ..     455     465 ..     454     475 .. 0.77
   5 ?   -1.1   0.0         1   2.3e+03       5      22 ..     506     523 ..     502     528 .. 0.76
   6 ?   -0.2   0.0      0.51   1.1e+03       3      24 ..     586     607 ..     584     611 .. 0.85
   7 ?   -1.2   0.1       1.1   2.4e+03       8      17 ..     644     653 ..     638     655 .. 0.51
   8 !   11.4   0.1   0.00012      0.26       5      39 ..     661     695 ..     658     697 .. 0.88
   9 !   24.3   0.1     1e-08   2.3e-05       3      39 ..     701     737 ..     700     739 .. 0.95
  10 !   13.1   0.2   3.4e-05     0.075       2      40 ..     942     981 ..     942     982 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3.1
                HHHHHHHTTHHHHHHHHT CS
         Arm  4 nkdavieaGavppLvrLL 21
                 k+ vi +G+++   +++
  KHJ31414.1 45 KKESVIAQGGLDLITQCI 62
                578899*****9888776 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0051
                 HHHHHHHHTT..TSSHHHHHHHHHHHHHHTT CS
         Arm  13 avppLvrLLs..sedeevqeeAawALsNLaa 41 
                 + p+L++ +   +  ++++ ++++ALsNLa+
  KHJ31414.1 117 VFPALLSNICpqNNPPQLVLASLRALSNLAD 147
                 67888888889999***************95 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 2
                 HHHHHHTTHHHHH CS
         Arm   5 kdavieaGavppL 17 
                  + + ++G++++L
  KHJ31414.1 210 QQILANSGVLDAL 222
                 57888******99 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 1.6
                 HHHHHHHTTTS CS
         Arm  14 vppLvrLLsse 24 
                 +p L+++L+  
  KHJ31414.1 455 IPLLLQMLDES 465
                 899*****943 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 1
                 HHHHHHTTHHHHHHHHTT CS
         Arm   5 kdavieaGavppLvrLLs 22 
                  ++v +aG++ +L   L+
  KHJ31414.1 506 QKVVFDAGIISRLSIILK 523
                 56788******9976666 PP

  == domain 6  score: -0.2 bits;  conditional E-value: 0.51
                 HHHHHHHHTTHHHHHHHHTTTS CS
         Arm   3 enkdavieaGavppLvrLLsse 24 
                 e ++ ++++G +p  v+ Lss+
  KHJ31414.1 586 EYRKKIVDQGLMPYIVESLSSQ 607
                 78999********999999875 PP

  == domain 7  score: -1.2 bits;  conditional E-value: 1.1
                 HHHTTHHHHH CS
         Arm   8 vieaGavppL 17 
                 +  +Gav++L
  KHJ31414.1 644 IAACGAVRAL 653
                 3345555555 PP

  == domain 8  score: 11.4 bits;  conditional E-value: 0.00012
                 HHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHH CS
         Arm   5 kdavieaGavppLvrLLssedeevqeeAawALsNL 39 
                 + ++i+ G+ +p  rLL+++d evq +A++++ NL
  KHJ31414.1 661 RTTLIDNGVAEPVFRLLQHPDIEVQIAATATVINL 695
                 67899************************997665 PP

  == domain 9  score: 24.3 bits;  conditional E-value: 1e-08
                 HHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHH CS
         Arm   3 enkdavieaGavppLvrLLssedeevqeeAawALsNL 39 
                 + +da+ +aG++++L++  +s +++++ +A+wAL +L
  KHJ31414.1 701 PMRDAIGKAGVLKILCEHARSVNPKLRLNAVWALKHL 737
                 789*******************************988 PP

  == domain 10  score: 13.1 bits;  conditional E-value: 3.4e-05
                 HHHHHHHH.HTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   2 senkdavi.eaGavppLvrLLssedeevqeeAawALsNLa 40 
                 ++++++vi +   ++ Lv   ++ + ev+ + +w ++NL+
  KHJ31414.1 942 PHHRQLVIaQTELLKLLVPQFNHSSIEVRLALCWLITNLT 981
                 678999999******************************8 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       6.4   1.4e+04      18      29 ..     136     147 ..     132     148 .. 0.79
   2 ?   -1.3   0.0       1.7   3.9e+03       2      13 ..     455     465 ..     455     471 .. 0.81
   3 ?    1.1   0.0      0.29   6.4e+02      15      29 ..     568     582 ..     565     583 .. 0.89
   4 ?   -2.0   0.0       2.9   6.6e+03       1      13 [.     596     608 ..     596     610 .. 0.85
   5 ?    5.0   0.0     0.016        36       5      28 ..     673     696 ..     670     699 .. 0.87
   6 !   12.5   0.1   6.3e-05      0.14       2      30 ..     712     740 ..     711     741 .. 0.92
   7 !    8.4   0.1    0.0013       2.8       1      27 [.     954     980 ..     954     981 .. 0.92
   8 ?    4.2   0.0      0.03        67       5      26 ..    1008    1029 ..    1004    1033 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 6.4
                 HHHHHHHHHHHH CS
        HEAT  18 eaAakaLgalae 29 
                  a+++aL +la 
  KHJ31414.1 136 LASLRALSNLAD 147
                 688999999985 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.7
                 HHHHHHHHT-SS CS
        HEAT   2 lPlllkllsDps 13 
                 +Plll++l D+s
  KHJ31414.1 455 IPLLLQML-DES 465
                 79****99.555 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.29
                 HHHHHHHHHHHHHHH CS
        HEAT  15 eVReaAakaLgalae 29 
                 +VRe ++ka++al++
  KHJ31414.1 568 KVREGSLKAIAALVP 582
                 8***********986 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 2.9
                 HHHHHHHHHT-SS CS
        HEAT   1 llPlllkllsDps 13 
                 l+P +++ ls++ 
  KHJ31414.1 596 LMPYIVESLSSQV 608
                 89******99865 PP

  == domain 5  score: 5.0 bits;  conditional E-value: 0.016
                 HHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgala 28 
                 + +ll++p+ eV  aA  ++ +l+
  KHJ31414.1 673 VFRLLQHPDIEVQIAATATVINLL 696
                 6789************99988875 PP

  == domain 6  score: 12.5 bits;  conditional E-value: 6.3e-05
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalaev 30 
                 l +l++  ++ +p+ R +A++aL +l+++
  KHJ31414.1 712 LKILCEHARSVNPKLRLNAVWALKHLVQG 740
                 7899**********************997 PP

  == domain 7  score: 8.4 bits;  conditional E-value: 0.0013
                 HHHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgal 27 
                 ll ll+   +++s eVR a ++ +++l
  KHJ31414.1 954 LLKLLVPQFNHSSIEVRLALCWLITNL 980
                 68899999**************99987 PP

  == domain 8  score: 4.2 bits;  conditional E-value: 0.03
                  HHHHHT-SSHHHHHHHHHHHHH CS
        HEAT    5 llkllsDpspeVReaAakaLga 26  
                  l kl +Dp+ +VRe A  aL +
  KHJ31414.1 1008 LEKLEQDPELSVRERAKSALWQ 1029
                  77877**********9998866 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1      0.72   1.6e+03       8      55 .]      95     145 ..      89     150 .. 0.59
   2 ?   -0.1   0.0      0.64   1.4e+03      30      49 ..     455     472 ..     453     475 .. 0.90
   3 ?    1.6   0.0      0.18   4.1e+02       3      37 ..     569     604 ..     567     608 .. 0.83
   4 ?   -2.0   0.0       2.5   5.7e+03      43      54 ..     641     652 ..     637     655 .. 0.63
   5 ?    0.3   0.0      0.49   1.1e+03       7      51 ..     649     691 ..     648     695 .. 0.54
   6 ?    1.5   0.0      0.21   4.7e+02       2      11 ..     725     734 ..     716     742 .. 0.69
   7 ?   -2.6   0.0       3.7   8.4e+03      25      47 ..     825     847 ..     817     847 .. 0.67
   8 !   16.2   0.1     5e-06     0.011      24      55 .]     947     980 ..     933     980 .. 0.85
   9 ?   -3.3   0.0       6.4   1.4e+04      33      48 ..    1008    1023 ..    1004    1026 .. 0.65

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.72
     HEAT_EZ   8 awaLGrlaggepellqp.lvpeilpaLl.alL.nddsdeVRaaAagaLgnl 55 
                 +  ++++a+++p+ l+      + paLl +   ++ ++    a+++aL+nl
  KHJ31414.1  95 LQIIASIAQEAPRFLASfTSASVFPALLsNICpQNNPPQLVLASLRALSNL 145
                 556666667777766665445555555534444445555566677777665 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.64
     HEAT_EZ  30 lpaLlalLnddsdeVRaaAa 49 
                 +p+Ll++L  d++++R++++
  KHJ31414.1 455 IPLLLQML--DESTTRTKSV 472
                 799*****..******9886 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.18
     HEAT_EZ   3 vRraAawaLGr.laggepellqplvpeilpaLlalL 37 
                 vR++ + a+++ +++ e    + + + ++p+ +  L
  KHJ31414.1 569 VREGSLKAIAAlVPFKEEYRKKIVDQGLMPYIVESL 604
                 9********999999998888888888888888666 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 2.5
     HEAT_EZ  43 eVRaaAagaLgn 54 
                 +V  aA+ga ++
  KHJ31414.1 641 NVLIAACGAVRA 652
                 566677777654 PP

  == domain 5  score: 0.3 bits;  conditional E-value: 0.49
     HEAT_EZ   7 AawaLGr.laggepellqplvpeilpaLlalLnddsdeVRaaAaga 51 
                 A++aL+r + + +  l+      +  +  +lL++++ eV+ aA  +
  KHJ31414.1 649 AVRALSRsVSVLRTTLIDN---GVAEPVFRLLQHPDIEVQIAATAT 691
                 6666666555555555332...222233356667777999888665 PP

  == domain 6  score: 1.5 bits;  conditional E-value: 0.21
     HEAT_EZ   2 rvRraAawaL 11 
                  +R +A+waL
  KHJ31414.1 725 KLRLNAVWAL 734
                 4555666665 PP

  == domain 7  score: -2.6 bits;  conditional E-value: 3.7
     HEAT_EZ  25 lvpeilpaLlalLnddsd.eVRaa 47 
                 + +++   L+ +L+dd+  +VR+a
  KHJ31414.1 825 AFQQAETKLA-ALRDDELdPVRKA 847
                 5555555555.8888888788876 PP

  == domain 8  score: 16.2 bits;  conditional E-value: 5e-06
     HEAT_EZ  24 p..lvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 +  +++e+l++L++  n++s eVR a ++ ++nl
  KHJ31414.1 947 LviAQTELLKLLVPQFNHSSIEVRLALCWLITNL 980
                 34489**************************997 PP

  == domain 9  score: -3.3 bits;  conditional E-value: 6.4
     HEAT_EZ   33 LlalLnddsdeVRaaA 48  
                  L +l +d++ +VR+ A
  KHJ31414.1 1008 LEKLEQDPELSVRERA 1023
                  4444466666998866 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.27     6e+02      19      64 ..     104     151 ..      96     162 .. 0.79
   2 !   12.1   0.2   8.9e-05       0.2      21      88 .]     657     735 ..     640     735 .. 0.73
   3 ?    4.0   0.0     0.028        64       2      55 ..     956    1027 ..     952    1033 .. 0.63

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.27
      HEAT_2  19 aairaLgrignpealpaLvell..ededpavRraaaeaLgaigdpeal 64 
                 +a r L+++ + +++paL++ +  ++  p    a  +aL+ ++d++a 
  KHJ31414.1 104 EAPRFLASFTSASVFPALLSNIcpQNNPPQLVLASLRALSNLADSSAM 151
                 555668888889999999998865555589999999999999988775 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 8.9e-05
      HEAT_2  21 iraLg.rignpealpaLvellededpavRraaaeaLg...........aigdpealpaLkellddddddvvReaAaeaLa 88 
                 + +L  ++ +  + + +++ll+++d +v+ aa  +             aig   +l++L+e +++  ++  R  A++aL+
  KHJ31414.1 657 VSVLRtTLIDNGVAEPVFRLLQHPDIEVQIAATATVInlltdvspmrdAIGKAGVLKILCEHARS-VNPKLRLNAVWALK 735
                 33444544555789999**************99988534445555555889999*******9987.56666889999996 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.028
      HEAT_2    2 daLlqalendpdpevrraairaLg...rignp...........ea.....lpaLvellededpavRraaaeaL 55  
                  ++L+ +  n+++ evr a ++ +    +i+++           e+     l+ L +l +d++  vR+ a  aL
  KHJ31414.1  956 KLLVPQF-NHSSIEVRLALCWLITnltWIDDQadrqqytqratELkklgfLAKLEKLEQDPELSVRERAKSAL 1027
                  4566666.78888888888888887774444444445555444114445588888888888888887776666 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.37   8.3e+02     146     185 ..      27      66 ..       4      71 .. 0.83
   2 !    4.6   0.0    0.0092        21      32      74 ..     628     669 ..     618     753 .. 0.80
   3 !    8.5   0.1   0.00058       1.3     153     206 ..     982    1033 ..     954    1034 .] 0.74

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.37
     CLASP_N 146 pReysaiwLkilltrfeshkskleasllldliekslkkgl 185
                  ++y ++ Lk+ ++  + +k+++ a+++ldli ++++k l
  KHJ31414.1  27 DKIYILKNLKNSIIGNPLKKESVIAQGGLDLITQCIRKEL 66 
                 4778888888888889999999999999*******99976 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0092
     CLASP_N  32 rslikgnvpedaveelleclkqlleailkalssLrttlsstgc 74 
                 ++ ikgn+ ++ ++ l++++   + a+++++s Lrttl+ +g+
  KHJ31414.1 628 KNTIKGNCGKNPTNVLIAACG-AVRALSRSVSVLRTTLIDNGV 669
                 789****99999999999998.999**************9986 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00058
     CLASP_N  153 wLkilltrfeshkskleasllldliekslkkgleDanptVRetaRstfweffkv 206 
                  w+    +r++ ++++ e ++l   +   l k+ +D++ +VRe a+s++w++ + 
  KHJ31414.1  982 WIDDQADRQQYTQRATELKKLG--FLAKLEKLEQDPELSVRERAKSALWQMKQA 1033
                  4444555555334443333322..4667899999****************9876 PP

>> IFRD  Interferon-related developmental regulator (IFRD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.5e-05     0.057     181     246 ..     630     692 ..     561     717 .. 0.81
   2 ?   -2.4   0.0      0.92   2.1e+03     202     242 ..     936     973 ..     908    1009 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.5e-05
        IFRD 181 sieaadsaska..lvtaalsawglLltllpssklnkkleedleealealvelLdssdvevriAAGeai 246
                 +i++++ ++ +  ++ aa+ a+  L   +  s l++ l +  + ++e ++ lL+++d+ev+iAA+ ++
  KHJ31414.1 630 TIKGNCGKN-PtnVLIAACGAVRALSRSV--SVLRTTLID--NGVAEPVFRLLQHPDIEVQIAATATV 692
                 233444444.2569999*****9999999..445555555..6689******************9873 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.92
        IFRD 202 lLltllpssklnkkleedleealealvelLdssdvevriAA 242
                  ++  +p ++   ++++   e+l+ lv + ++s++evr+A 
  KHJ31414.1 936 HMAASVPHHRQLVIAQT---ELLKLLVPQFNHSSIEVRLAL 973
                 44555555555555655...469999999999999999985 PP

>> DUF3361  Domain of unknown function (DUF3361)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0         2   4.6e+03       6      22 ..      49      65 ..      47      74 .. 0.84
   2 ?   -1.2   0.0      0.79   1.8e+03       8      89 ..      91     108 ..      86     212 .. 0.63
   3 ?    5.8   0.0    0.0053        12      65     113 ..     480     529 ..     465     537 .. 0.84
   4 ?    7.0   0.0    0.0024       5.3      68     153 ..     681     766 ..     658     766 .. 0.87
   5 ?   -1.1   0.1       0.7   1.6e+03      69     139 ..     924     995 ..     902    1004 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2
     DUF3361  6 FisrdGlkllvkiveeg 22
                 i ++Gl+l++++++++
  KHJ31414.1 49 VIAQGGLDLITQCIRKE 65
                6999*********9986 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.79
     DUF3361   8 srdGlkllvkiveegkesgeilayaLtafleLmdhgivsWdtlsdeFikkiasivnksaadasilqrslaiLesivlnssel 89 
                 + +Gl+++++i +e                                                                  + 
  KHJ31414.1  91 RYQGLQIIASIAQEA----------------------------------------------------------------PRF 108
                 555555555544443................................................................333 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0053
     DUF3361  65 s.aadasilqrslaiLesivlnsselyelvekevtlesLiehLqssnqei 113
                   + d +i + +la+L  +++ s+ l ++v ++  +++L   L+ s + i
  KHJ31414.1 480 VdKLDRTIKEMALAVLAMFIIDSDYLQKVVFDAGIISRLSIILKASYDPI 529
                 34679****************************99999999888776666 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.0024
     DUF3361  68 dasilqrslaiLesivlnsselyelvekevtlesLiehLqssnqeiqtnalaLlnALllkaddskrkelaetlskkqlrkvilkni 153
                 d +++ +++a + ++ +  s + + + k+  l+ L eh +s n+++  na+  l  L++ ++++ +++ +e l ++ l ++i++ i
  KHJ31414.1 681 DIEVQIAATATVINLLTDVSPMRDAIGKAGVLKILCEHARSVNPKLRLNAVWALKHLVQGVNNEMKRRCVEELGHSWLVQLICDDI 766
                 6778888888888899998989999999999*****************************************99999998888765 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 0.7
     DUF3361  69 asilqrslaiLesivlnsselyelvekevt.lesLiehLqssnqeiqtnalaLlnALllkaddskrkelaet 139
                 ++i+ +   iL +++ +  ++ +lv  + + l+ L+  +++s+ e+      L++ L    d+++r++ ++ 
  KHJ31414.1 924 TEIIVAVEYILVHMAASVPHHRQLVIAQTElLKLLVPQFNHSSIEVRLALCWLITNLTWIDDQADRQQYTQR 995
                 556666667888999998888887777776477889999999999999999999999999888888887665 PP

>> Atx10homo_assoc  Spinocerebellar ataxia type 10 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       2.8   6.2e+03       5      36 ..      31      62 ..      28      65 .. 0.78
   2 ?    1.4   0.0      0.15   3.3e+02       6      61 ..      95     150 ..      90     171 .. 0.78
   3 ?    7.6   0.0    0.0017       3.8      19      70 ..     702     753 ..     689     762 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2.8
  Atx10homo_assoc  5 lvrllgnlvyknkevqdkvreldgleliLsqc 36
                     +++ l n ++ n+  ++ v +++gl li +++
       KHJ31414.1 31 ILKNLKNSIIGNPLKKESVIAQGGLDLITQCI 62
                     56667777888999999999999999998876 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.15
  Atx10homo_assoc   6 vrllgnlvyknkevqdkvreldgleliLsqcniDdnnPfirewailairnLlegne 61 
                      ++++++++ + ++    + + + ++++Ls++  ++n P +   ++ a+ nL ++++
       KHJ31414.1  95 LQIIASIAQEAPRFLASFTSASVFPALLSNICPQNNPPQLVLASLRALSNLADSSA 150
                      67888888888888888888888888888888888888888888888888876654 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.0017
  Atx10homo_assoc  19 vqdkvreldgleliLsqcniDdnnPfirewailairnLleg..neenqelvaeL 70 
                      ++d + + + l+++ ++    + nP +r  a++a+++L++g  ne  ++ v+eL
       KHJ31414.1 702 MRDAIGKAGVLKILCEHA--RSVNPKLRLNAVWALKHLVQGvnNEMKRRCVEEL 753
                      556666666565554444..468****************953266777778777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1034 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       642  (0.0358079); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.77u 0.25s 00:00:01.02 Elapsed: 00:00:00.43
# Mc/sec: 7236.11
//
Query:       KHJ31415.1  [L=287]
Description: putative sda1 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-16   59.9   0.2    3.4e-16   59.4   0.2    1.2  1  DDE_1     DDE superfamily endonuclease
  ------ inclusion threshold ------
       0.17   11.2   5.1       0.23   10.8   5.1    1.1  1  DUF3523   Domain of unknown function (DUF3523)


Domain annotation for each model (and alignments):
>> DDE_1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.2   3.8e-20   3.4e-16       6     136 ..      37     168 ..      32     207 .. 0.87

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 3.8e-20
       DDE_1   6 vllcanaagsekLkplvigkaksprafkngektkkkldveyksnrkawltssifeeWLkvfdkrle..aekrkilLlldssrshetvel.leselqnik 101
                 ++++ n+ag++  +p +i+ +++++  +    ++ + d   + + ++ ++s+ + e+Lk+f+k     ++k   +Ll+d++++h  +e+ l  e+++i+
  KHJ31415.1  37 TVIETNSAGGNYQPPFIILPGEKLKDNWC--HENIENDTWVTTSPTGYISSQAMLEYLKHFVKFSDlgQNKPWTILLIDRHKCHYHEEFfLIAEENHIH 133
                 46899***********************9..556666666688899*****************999767777789**********9999999******* PP

       DDE_1 102 lvflPassasllqPldqgvvselKarYrrqllqal 136
                 l ++P++ ++ lqPld g++ + K++  r+++ a+
  KHJ31415.1 134 LQIFPSHETHALQPLDFGIFRQWKHQQNRYINMAI 168
                 ***********************998776665544 PP

>> DUF3523  Domain of unknown function (DUF3523)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   5.1   2.5e-05      0.23      86     137 ..     172     223 ..     153     247 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 2.5e-05
     DUF3523  86 aeerrktlqeetkqkqqraqyedeLarkryqdeleaqrkrneellkkqeesv 137
                 + + +k l ++++ k q  +y+d ++r+r+ + +ea+ + +e +l +q e  
  KHJ31415.1 172 NFNCKKALRTRARYKGQIHRYNDRVQRQRIRKRKEAEAELDEPELSRQLELL 223
                 44669999**************************************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1994.65
//
Query:       KHJ31416.1  [L=2013]
Description: putative copii coat assembly protein sec16 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.1e-102  341.6   0.1   1.5e-101  340.0   0.1    1.9  1  Sec16_C   Sec23-binding domain of Sec16
    1.1e-28  100.2   0.0    5.7e-28   97.9   0.0    2.4  1  Sec16     Vesicle coat trafficking protein Sec16 mid-region


Domain annotation for each model (and alignments):
>> Sec16_C  Sec23-binding domain of Sec16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  340.0   0.1  1.7e-105  1.5e-101       1     302 []    1224    1527 ..    1224    1527 .. 0.97

  Alignments for each domain:
  == domain 1  score: 340.0 bits;  conditional E-value: 1.7e-105
                  HHHHHHTT-HHHHHHHHHHTT-HHHHHHHHHTS-HHHHHHHHHHHHH---..---THHHHHHHHHHTTT-HHHHHHHHHH................. CS
     Sec16_C    1 iqalLlrGdrekAlqlAldkklWahAlliasllgkelwkevvqefvrselk.egensesLrvlyqvfaGnseeavdelvptsaraslq......qae 90  
                  ++++L +G+r kA++ A+dk+lWahA+li+++++++l+k+v+qefv++e++   +ns++L++ly++faGn ee++delvp+sara++q      +ae
  KHJ31416.1 1224 LKNYLSQGERVKAVWEAVDKRLWAHAILISNTVSQDLYKQVAQEFVQKEVRiIDNNSQPLAFLYEIFAGNFEESIDELVPPSARAGFQlvstsnNAE 1320
                  579************************************************988899*********************************9888778 PP

                  -HHHHHHHHHSHHHHHHHHHHTS--HHHHHHHHHHHHHHHTT-HHHHHHHHHHT-SSS.............BSSTTS--B--SSSTTSHHHHHHHHH CS
     Sec16_C   91 eskeaeealdkWretvalvlsnrspsdseaLtalGdlLaskgrveaahicyllalsqtslfggldspsarlvllgadhvkfessfakdlesilltEi 187 
                  + +++  +ldkWre + lvl nr ++d++aL+alG+lLa +grveaah+c+++a++  ++f+g+d+p a++vl+g+dh + +++f+++l+sil++E+
  KHJ31416.1 1321 SLQDTLTSLDKWRESLNLVLCNRNAEDTRALIALGNLLAGYGRVEAAHVCFIFARHL-AVFNGVDDPLAKFVLIGSDHLRLPYDFDRELKSILISEV 1416
                  8889999***********************************************776.7************************************** PP

                  HHHHH.HT....TT----CCCHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHTS-TTSHHHHH.HHHHHHHHHHHT-XXX.....XXX..XXXXXX CS
     Sec16_C  188 yEfalslspaakekfaglphLlayKllhAavLaelGlvseAqkYcdaiaaslksltkkspylhptlleqlkdLserLseapkedksssWlkiskpsl 284 
                  +++  sls++ +++ ++ phL+ yKl++A+vLae+G +++A  Yc+ i+as++s+t++ py+h  l+++++dL +rL+ +p+ ++sssW  iskps+
  KHJ31416.1 1417 FDYGQSLSNQ-STAAVSSPHLAVYKLHYAKVLAEYGFREKALNYCEIITASTTSQTRRLPYHHDLLISEVEDLFRRLKRSPR-SASSSW--ISKPSI 1509
                  ********55.56679*****************************************************************8.778***..****** PP

                  XXXXXXXXXXXXXXXXXX CS
     Sec16_C  285 dkvwgsleksfnkfvaGd 302 
                  dk +gs++++fnkfvaG+
  KHJ31416.1 1510 DKAKGSVWATFNKFVAGE 1527
                  *****************8 PP

>> Sec16  Vesicle coat trafficking protein Sec16 mid-region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.9   0.0   6.4e-32   5.7e-28       2     118 .]    1046    1163 ..    1045    1163 .. 0.97

  Alignments for each domain:
  == domain 1  score: 97.9 bits;  conditional E-value: 6.4e-32
       Sec16    2 pvvsFGfGGklvtmfPkrkpsls.gssvsssksspgevkirslkelvpssedaskfPGPlvkgkskkkevlkwLserieeleaevay.aegelesaa 96  
                  p++++G+GG +v++fPk++p++  ++s +++ ++pge++i ++ke +p +   ++fPGPl +gkskkke+++wL++ ie le+++++ +++++ s++
  KHJ31416.1 1046 PIFAWGVGGIIVSSFPKSIPQFRsNESSQAILRYPGEIRIGNIKEQCPLNPLIAQFPGPL-RGKSKKKEIIAWLTTGIELLESDTDKyQMSPHLSHD 1141
                  9**********************999**********************************.*********************9988779999999** PP

       Sec16   97 arraeekllLlkllkllvehdG 118 
                  ++  ee+++L+k+l++++e dG
  KHJ31416.1 1142 QKCLEERVVLWKILRIFIEYDG 1163
                  ********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2013 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1197  (0.0667633); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.05u 0.30s 00:00:01.35 Elapsed: 00:00:00.49
# Mc/sec: 12285.79
//
Query:       KHJ31417.1  [L=442]
Description: putative cytochrome c mitochondrial import factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.7e-09   36.6   0.0    0.00011   22.8   0.0    2.3  2  NAD_binding_1  Oxidoreductase NAD-binding domain
    5.6e-06   26.6   0.0    2.3e-05   24.7   0.0    2.0  2  FAD_binding_6  Oxidoreductase FAD-binding domain
      7e-05   23.0   0.0    0.00032   20.8   0.0    2.1  2  NAD_binding_6  Ferric reductase NAD binding domain


Domain annotation for each model (and alignments):
>> NAD_binding_1  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   1.8e-08   0.00011       1      40 [.     270     312 ..     270     315 .. 0.89
   2 !   11.5   0.0     6e-05      0.36      31     107 ..     327     410 ..     315     412 .. 0.68

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 1.8e-08
                    EEEEGGGGHHHHHHHHHHHHHCT...TCSEEEEEEEESSGCGS CS
  NAD_binding_1   1 miagGtGiaPvrsvlraileeak...dktkvvlvyGnrteedl 40 
                    ++agGtGi+P +++++++le+ +    k  +++v++nr++ed 
     KHJ31417.1 270 FLAGGTGISPALQIIHKFLERRNlkdIKPSIHIVWANRRREDC 312
                    79******************9656767889*********9996 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 6e-05
                    EEEESSGC.GSTTHHHHHHHHHHCTTEEEEEEE.....ESSCTTTSSSEESSHHHHHHHHHHH.HSSTTEEEEEECSHHHHHHH CS
  NAD_binding_1  31 vyGnrtee.dllyreeleelakklpgrlkvvav.....vsreeagweggkgrvqdalleells.lkkeethvyvCGppgMikav 107
                    + G r+++ +  + + l+++++ +p++l+++++     ++ ++++ ++     ++++ e++ls  + ++ +++v Gp+g+i+++
     KHJ31417.1 327 FPGSRENQnNNPIVDYLNRMQQLHPDELTIQYFvdeegSKLNSKTLAKLIQKFSKNMPENSLSqSQTQSRLLLVSGPEGFIEFI 410
                    55666555466677899****************54333223333333333344455555555588889999**********987 PP

>> FAD_binding_6  Oxidoreductase FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.93   5.6e+03       2      22 ..     155     175 ..     154     183 .. 0.79
   2 !   24.7   0.0   3.9e-09   2.3e-05      38      97 ..     198     259 ..     191     261 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.93
                    EEEEEEEECCTTEEEEEEEES CS
  FAD_binding_6   2 lkltekeevsedtrifrfklp 22 
                    +++++ke +s+   i++++  
     KHJ31417.1 155 FEIIKKEAISSTAFILSLRSI 175
                    578999*****9999999765 PP

  == domain 2  score: 24.7 bits;  conditional E-value: 3.9e-09
                    EEECETTCCEEEEEE.BSST..TECCEEEEEEE--TT-HHHHHHHCS-TT-EEEEEEEE-SE CS
  FAD_binding_6  38 lrlkikgeaviRsYtpisse..nekGelellvkvypgGkmsqaLdelkigdtleikGPlGkf 97 
                    +++k ++ ++ RsYtp+     +   ++ +l+++   G+m+ +L++l+  + ++++GP+ ++
     KHJ31417.1 198 VEVKQPELQISRSYTPLPPLrgEPLDYITFLIRKNYRGEMTGYLNRLQEKSIIQLRGPYQEL 259
                    5667778899******9876336899********************************9776 PP

>> NAD_binding_6  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   5.4e-08   0.00032       3      48 ..     267     311 ..     265     319 .. 0.89
   2 ?   -1.5   0.0       0.4   2.4e+03      54      90 ..     341     375 ..     330     422 .. 0.52

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 5.4e-08
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6   3 nvllvagGiGitpfisilkdllkkskkealktkkikliwvvresss 48 
                    ++l++agG+Gi+p++ i+ ++l++ +  +  +++i+++w++r +++
     KHJ31417.1 267 QILFLAGGTGISPALQIIHKFLERRN-LKDIKPSIHIVWANRRRED 311
                    799********************998.677789*********8875 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.4
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6  54 dvLneleeeksegnieihiYlTseyeaedasdqliss 90 
                    d+Ln ++++++  ++ i+ ++ +e ++  +s++l + 
     KHJ31417.1 341 DYLNRMQQLHPD-ELTIQYFVDEEGSK-LNSKTLAKL 375
                    566666666666.55555554333222.222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 3066.46
//
Query:       KHJ31418.1  [L=1866]
Description: putative proteophosphoglycan ppg4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1866 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       939  (0.0523733); expected 358.6 (0.02)
Passed bias filter:                      236  (0.013163); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.92u 0.29s 00:00:01.21 Elapsed: 00:00:00.46
# Mc/sec: 12323.66
//
Query:       KHJ31419.1  [L=303]
Description: putative vacuolar membrane pq loop repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-32  108.7  13.4    2.5e-19   68.8   3.0    3.2  4  PQ-loop   PQ loop repeat
  ------ inclusion threshold ------
      0.023   14.7   0.0      0.043   13.8   0.0    1.4  1  LRR19-TM  Leucine-rich repeat family 19 TM domain


Domain annotation for each model (and alignments):
>> PQ-loop  PQ loop repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   2.8   2.6e-18   2.3e-14       1      58 [.      20      77 ..      20      80 .. 0.94
   2 ?   -3.1   0.3      0.77   6.9e+03      39      56 ..      89     102 ..      83     106 .. 0.50
   3 ?   -2.2   0.4       0.4   3.6e+03       7      17 ..     170     180 ..     165     183 .. 0.67
   4 !   68.8   3.0   2.8e-23   2.5e-19       2      58 ..     207     263 ..     206     266 .. 0.95

  Alignments for each domain:
  == domain 1  score: 52.9 bits;  conditional E-value: 2.6e-18
     PQ-loop  1 lseilgyislvlwlvsyiPQiikNykrkSteGlSilflllwllGdilsllylilngfp 58
                ls i+g+isl+ w++ ++PQ ++Ny++k++ G+S+ fl  w+lGd+++l + ++ +  
  KHJ31419.1 20 LSGISGSISLAAWIFFLVPQFVLNYRNKNANGISLTFLSVWTLGDLANLSGAVWASLV 77
                5789***********************************************9998765 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.77
     PQ-loop  39 llwllGdilsllylilng 56 
                 +     di+ +++++  +
  KHJ31419.1  89 FT----DIILIAQTFYYN 102
                 33....445555555444 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.4
     PQ-loop   7 yislvlwlvsy 17 
                  i+ ++w++++
  KHJ31419.1 170 VIGSIGWIIAF 180
                 45667777766 PP

  == domain 4  score: 68.8 bits;  conditional E-value: 2.8e-23
     PQ-loop   2 seilgyislvlwlvsyiPQiikNykrkSteGlSilflllwllGdilsllylilngfp 58 
                 ++ilgy+s++++l ++iPQiikNy+ kS+eGl +lf++l llG++++ l++i+ ++ 
  KHJ31419.1 207 AQILGYMSAIFYLTARIPQIIKNYRQKSCEGLALLFFILSLLGNSTYGLSIIFHSSQ 263
                 589*************************************************99875 PP

>> LRR19-TM  Leucine-rich repeat family 19 TM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   4.8e-06     0.043      10      84 ..      68     147 ..      63     159 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 4.8e-06
    LRR19-TM  10 ksgksWaylv.gvvvlalvtsllillaikckllykfllsYrHrrLeese...aetyeegltenrns.lseasdtnseddd 84 
                  sg  Wa lv +vv++a+  ++  ++ i   ++y++l+  rHr+         ++y + l+ ++++ ++++s+  +++dd
  KHJ31419.1  68 LSGAVWASLVpTVVIIAMYFCFTDIILIAQTFYYNYLQTSRHRNKIAVTsttDNEYTTLLASQPEAdFPHLSTSATQQDD 147
                 68999**99945788899999999999999************97444332223334444444444357777776666444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       703  (0.0392102); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2210.90
//
Query:       KHJ31420.1  [L=111]
Description: hypothetical protein EV44_g5469 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0044   16.9  20.8      0.005   16.7  20.8    1.0  1  ERM              Ezrin/radixin/moesin family
     0.0056   16.5  16.3     0.0056   16.5  16.3    2.1  2  KASH_CCD         Coiled-coil region of CCDC155 or KASH
     0.0099   16.6  13.9      0.075   13.8   5.2    2.1  2  DUF4472          Domain of unknown function (DUF4472)
  ------ inclusion threshold ------
      0.068   12.0  19.0      0.079   11.8  19.0    1.0  1  Spc7             Spc7 kinetochore protein
      0.099   12.7  23.4       0.14   12.2  23.4    1.2  1  CENP-F_leu_zip   Leucine-rich repeats of kinetochore protein 
       0.13   12.8  29.0        2.7    8.5  28.2    2.0  1  APG6_N           Apg6 coiled-coil region
       0.14   12.0   4.2       0.19   11.6   4.2    1.3  1  IQCJ-SCHIP1      Fusion protein IQCJ-SCHIP1 with IQ-like moti
       0.17   11.8  18.9        0.3   11.1   5.0    3.1  3  SWIRM-assoc_1    SWIRM-associated region 1
       0.17   12.0   2.1          1    9.6   0.3    2.1  2  Thiol_cytolys_C  Thiol-activated cytolysin beta sandwich doma
       0.27   11.4  20.5       0.61   10.3  11.9    2.2  2  TMF_TATA_bd      TATA element modulatory factor 1 TATA bindin
       0.31   11.5  21.0       0.93   10.0   8.6    2.4  2  KELK             KELK-motif containing domain of MRCK Ser/Thr
       0.39   10.9  18.0       0.49   10.6  10.6    2.4  2  JIP_LZII         JNK-interacting protein  leucine zipper II
       0.44    9.9  21.7        1.4    8.3  21.7    1.7  1  GAS              Growth-arrest specific micro-tubule binding
        0.6   10.8  29.3        1.3    9.8   1.6    5.4  4  M                M protein repeat
       0.77   10.4  11.4         13    6.5   0.0    3.0  3  GTP-bdg_M        GTP-binding GTPase Middle Region
       0.84    8.9  13.6       0.56    9.5  11.8    1.3  1  DUF3450          Protein of unknown function (DUF3450)
        1.4    6.8   7.2        1.5    6.6   7.2    1.2  1  V_ATPase_I       V-type ATPase 116kDa subunit family
        1.6    8.7  10.0       0.23   11.3   2.1    2.5  3  DUF3658          Protein of unknown function
        2.3    7.7   7.4        2.6    7.5   7.4    1.0  1  Exonuc_VII_L     Exonuclease VII, large subunit
        3.3    8.0  22.2        2.9    8.2   4.1    3.6  3  HALZ             Homeobox associated leucine zipper
        3.9    7.7  18.3        9.9    6.5  11.2    2.4  2  Spc24            Spc24 subunit of Ndc80
        4.8    6.0   7.4        1.2    8.0   2.4    1.9  2  RTBV_P46         Rice tungro bacilliform virus P46 protein
        7.6    4.9  15.4         41    2.5  15.4    1.8  1  LCD1             DNA damage checkpoint protein


Domain annotation for each model (and alignments):
>> ERM  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7  20.8   6.5e-06     0.005      26     129 ..       3     106 ..       1     110 [. 0.84

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 6.5e-06
         ERM  26 eaLreseetaelLaekarraeeeaelLeqkaaeaeeeiqrlkesaekeeeekeklerklreaeleaarleeeserkeeeaerLkeeleeareaeeeake 124
                 +++++ e + + L+ +++ +e+e + L+ +++++eee+ +l+ ++++ e e+++l+ ++++ e e + ++ e ++ e e + L +e +e++++ +  ++
  KHJ31420.1   3 KEMQDIETKRKILESEKQSLENEWKSLKSERQNLEEEKLALEADKKNLEIERQELKVQMQDLENEGKYIQIEWRELEYERKCLDNEWLEVERERQLLES 101
                 578888888999999999999999999999999999999999999999999999999999999999999999999999999999999988888877776 PP

         ERM 125 kllea 129
                 ++l+ 
  KHJ31420.1 102 EMLKK 106
                 66655 PP

>> KASH_CCD  Coiled-coil region of CCDC155 or KASH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5  16.3   7.2e-06    0.0056      61     121 ..      18      78 ..       3      85 .. 0.84
   2 ?    2.6   1.1      0.14   1.1e+02      78     104 ..      77     103 ..      71     109 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 7.2e-06
    KASH_CCD  61 kaklleeEleelkalvkeleEkrarlkaqnkqlekenqsLiakiesLqeenikllaekdel 121
                 ++++le+E   lk   ++leE++  l+a +k+le e+q L++++++L++e + ++ e  el
  KHJ31420.1  18 EKQSLENEWKSLKSERQNLEEEKLALEADKKNLEIERQELKVQMQDLENEGKYIQIEWREL 78 
                 4568*********************************************999888886655 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.14
    KASH_CCD  78 eleEkrarlkaqnkqlekenqsLiaki 104
                 ele +r+ l ++  ++e+e+q L++++
  KHJ31420.1  77 ELEYERKCLDNEWLEVERERQLLESEM 103
                 556666667777777888888887776 PP

>> DUF4472  Domain of unknown function (DUF4472)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   5.2   9.7e-05     0.075      56     106 ..       3      53 ..       1      54 [. 0.82
   2 !    9.2   8.3    0.0026         2      29      95 ..      32      98 ..      30     106 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 9.7e-05
     DUF4472  56 eeiqslrerlaeleeekkeleeeyvvlkknyqalekefekekkkqqelsle 106
                 +e q+++++ + le+ek++le+e ++lk++ q+le+e  + ++ +++l+ e
  KHJ31420.1   3 KEMQDIETKRKILESEKQSLENEWKSLKSERQNLEEEKLALEADKKNLEIE 53 
                 678899999999999999999999999999999999888888888877655 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0026
     DUF4472 29 ekfelknkvlalenrvlelelerekaaeeiqslrerlaeleeekkeleeeyvvlkknyqalekefek 95
                e+ +l+ + lale +  +le+er++++ + q+l+++ + ++ e +ele e + l+++ +++e+e + 
  KHJ31420.1 32 ERQNLEEEKLALEADKKNLEIERQELKVQMQDLENEGKYIQIEWRELEYERKCLDNEWLEVERERQL 98
                5566788888888888888888888888888888888888888888888888888888888877664 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8  19.0    0.0001     0.079     151     250 ..       1     103 [.       1     107 [. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.0001
        Spc7 151 leedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkk....elaelqeqleeleekieelkeqkse 245
                 + ++ + +e +++ l++ +++le+e ++l++e ++l+e++  le+ dk++Le  r+el+ +++++e+  k    e  el+ +++ l++++ e++ +++ 
  KHJ31420.1   1 MGKEMQDIETKRKILESEKQSLENEWKSLKSERQNLEEEKLALEA-DKKNLEIERQELKVQMQDLENEGKyiqiEWRELEYERKCLDNEWLEVERERQL 98 
                 56789999******************************9988777.99999999999999999998865511115668899999999999999999988 PP

        Spc7 246 leeei 250
                 le+e+
  KHJ31420.1  99 LESEM 103
                 88876 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2  23.4   0.00018      0.14       3      95 ..       3      95 ..       2     107 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00018
  CENP-F_leu_zip  3 kkklhvlekLKeserkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqer 95
                    k+ + ++ k K  e+++ sL++  ++L++e +++ee++ +++ ++ +   e ++lk +++ l++e + ++++  +l  e+++L++e  +  ++
      KHJ31420.1  3 KEMQDIETKRKILESEKQSLENEWKSLKSERQNLEEEKLALEADKKNLEIERQELKVQMQDLENEGKYIQIEWRELEYERKCLDNEWLEVERE 95
                    567788889999999999999999999999999999988888888888888888999999999999999999999999999999885444433 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5  28.2    0.0035       2.7      47     124 ..      10      87 ..       1     103 [. 0.43

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0035
      APG6_N  47 eeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynelqlelleleeeldslea 124
                 ++++ le e + le+e ++l +e ++le+e+ +lea+ ++le e ++l+ + +   +e +  q+e  ele e+++l++
  KHJ31420.1  10 TKRKILESEKQSLENEWKSLKSERQNLEEEKLALEADKKNLEIERQELKVQMQDLENEGKYIQIEWRELEYERKCLDN 87 
                 233444444444444444444444444444444444444444444444444444444444444444444444444443 PP

>> IQCJ-SCHIP1  Fusion protein IQCJ-SCHIP1 with IQ-like motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   4.2   0.00024      0.19       5      59 ..      21      80 ..       5      89 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00024
  IQCJ-SCHIP1  5 rlqnpleqvndGkyllenhqlamdven...niekyhl..nlqpleskvkiiqrawreylq 59
                  l+n  +     +  le+ +la++++    +ie+ +l  ++q le   k iq  wre   
   KHJ31420.1 21 SLENEWKSLKSERQNLEEEKLALEADKknlEIERQELkvQMQDLENEGKYIQIEWRELEY 80
                 6778888888888889999999877542234666655116789*************9654 PP

>> SWIRM-assoc_1  SWIRM-associated region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   5.0   0.00039       0.3      49      80 ..      13      44 ..       3      48 .. 0.69
   2 ?    6.8   3.5    0.0083       6.5      53      80 ..      38      65 ..      37      76 .. 0.72
   3 ?    4.0   1.9     0.063        49      48      79 ..      68      99 ..      59     105 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00039
  SWIRM-assoc_1 49 klleaerrelekqrqqLlleRlalkkevlkva 80
                   k+le e+++le++ ++L +eR++l++e+l ++
     KHJ31420.1 13 KILESEKQSLENEWKSLKSERQNLEEEKLALE 44
                   67888888888888888888888888777665 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0083
  SWIRM-assoc_1 53 aerrelekqrqqLlleRlalkkevlkva 80
                   +e+ +le  +++L +eR++lk ++++++
     KHJ31420.1 38 EEKLALEADKKNLEIERQELKVQMQDLE 65
                   6777777777777777777777766655 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.063
  SWIRM-assoc_1 48 EklleaerrelekqrqqLlleRlalkkevlkv 79
                    k ++ e rele +r+ L +e l++++e++ +
     KHJ31420.1 68 GKYIQIEWRELEYERKCLDNEWLEVERERQLL 99
                   46788999999999999999999999887655 PP

>> Thiol_cytolys_C  Thiol-activated cytolysin beta sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.3    0.0013         1      28      67 ..      18      57 ..       8      64 .. 0.86
   2 ?    2.5   0.1      0.21   1.6e+02       4      29 ..      64      86 ..      59     106 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0013
                     -EEEEEEE-TTTT-EBESSEEEEEEE-TTEEEEEEEEEEE CS
  Thiol_cytolys_C 28 kevvkkkeWegngkdrtakfsttiqlkgnarnirvkarev 67
                     ++   ++eW++ +++r++  ++++ l+++ +n++++ +e 
       KHJ31420.1 18 EKQSLENEWKSLKSERQNLEEEKLALEADKKNLEIERQEL 57
                     45556789**********99****************9986 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.21
                     EEEESSSEEEEEEEEEEEEE-TTS-E CS
  Thiol_cytolys_C  4 ldhsGayvAkfeitwdevsydeegke 29
                     l+++G y+   +i+w e++y+++  +
       KHJ31420.1 64 LENEGKYI---QIEWRELEYERKCLD 86
                     67777776...799999999887654 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3  11.9   0.00078      0.61      22      78 ..      13      66 ..       3      72 .. 0.76
   2 ?    6.7   1.3     0.011       8.2      17      52 ..      71     106 ..      68     109 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00078
  TMF_TATA_bd 22 rrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqe 78
                 + lE+E++sl++e ++l++er++++ee ++l ++  +l+ + +el+ +   +++l++
   KHJ31420.1 13 KILESEKQSLENEWKSLKSERQNLEEEKLALEADKKNLEIERQELKVQ---MQDLEN 66
                 669**************************9997766666555555544...444443 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.011
  TMF_TATA_bd  17 lsseirrlEgElaslkeelerleaerdeareeivkl 52 
                  ++ e r+lE E + l +e  ++e+er+ +++e++k 
   KHJ31420.1  71 IQIEWRELEYERKCLDNEWLEVERERQLLESEMLKK 106
                  5667799*************************9986 PP

>> KELK  KELK-motif containing domain of MRCK Ser/Thr protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   4.8     0.012       9.3      35      68 ..       3      36 ..       1      40 [. 0.84
   2 ?   10.0   8.6    0.0012      0.93       4      65 ..      42     103 ..      40     108 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.012
        KELK 35 keLkdaisqrklamqefsevneklselrsqkqkl 68
                ke++d  ++rk+   e + +++  ++l+s++q l
  KHJ31420.1  3 KEMQDIETKRKILESEKQSLENEWKSLKSERQNL 36
                8999999999999999999999999999999887 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.0012
        KELK   4 eLekqlrllkqEkeelqkelaeaqErlksqkkeLkdaisqrklamqefsevneklselrsqk 65 
                 +Le   + l+ E++el+ +++++++  k  + e ++    rk   +e+ ev+   + l s+ 
  KHJ31420.1  42 ALEADKKNLEIERQELKVQMQDLENEGKYIQIEWRELEYERKCLDNEWLEVERERQLLESEM 103
                 589999*********************************************98877777765 PP

>> JIP_LZII  JNK-interacting protein  leucine zipper II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   5.9     0.012       9.7      38      64 ..      15      41 ..       3      46 .. 0.61
   2 ?   10.6  10.6   0.00063      0.49       5      69 ..      31      95 ..      29      97 .. 0.95

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.012
    JIP_LZII 38 LtsereiLreEleslqkakerlesrik 64
                L se+++L++E +sl+++++ le++  
  KHJ31420.1 15 LESEKQSLENEWKSLKSERQNLEEEKL 41
                556666666666666666666666555 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00063
    JIP_LZII  5 kevenLikENteLletknaLnvvkddLIarvdeLtsereiLreEleslqkakerlesrikelEee 69
                 e +nL +E   L + k  L++ +++L  +  +L +e + ++ E ++l+ +++ l ++  e+E e
  KHJ31420.1 31 SERQNLEEEKLALEADKKNLEIERQELKVQMQDLENEGKYIQIEWRELEYERKCLDNEWLEVERE 95
                5779**********************************************************998 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3  21.7    0.0018       1.4      33     128 ..       3     102 ..       1     109 [. 0.79

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0018
         GAS  33 eeieelkkkeernekelseisqenkrlkepLkkaeeeveeLrkqlknyekdkqslk....nlkarlkelekelkdlkwehevleqrfekvekerdelyk 127
                 +e++++++k +  e e + +++e k+lk + +++eee+  L+++ kn e ++q+lk     l+++ k  + e ++l++e + l  +  +ve+er+ l++
  KHJ31420.1   3 KEMQDIETKRKILESEKQSLENEWKSLKSERQNLEEEKLALEADKKNLEIERQELKvqmqDLENEGKYIQIEWRELEYERKCLDNEWLEVERERQLLES 101
                 688899999999999999999999999999999999999999999988777766651111455555667777899999999999999999999998876 PP

         GAS 128 k 128
                 +
  KHJ31420.1 102 E 102
                 5 PP

>> M  M protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   1.6    0.0017       1.3       2      18 ..      11      27 ..      10      30 .. 0.82
   2 ?    7.2   3.3     0.012       9.4       6      21 .]      29      44 ..      26      44 .. 0.90
   3 ?    8.8   1.8    0.0036       2.8       2      14 ..      46      58 ..      45      65 .. 0.85
   4 ?    0.5   0.1       1.9   1.5e+03       5      16 ..      91     102 ..      91     103 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0017
           M  2 akkeLEaelqeLeeelq 18
                + k LE+e+q Le+e +
  KHJ31420.1 11 KRKILESEKQSLENEWK 27
                6799*********9955 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.012
           M  6 LEaelqeLeeelqaLe 21
                L +e+q+Leee+ aLe
  KHJ31420.1 29 LKSERQNLEEEKLALE 44
                889*********9997 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0036
           M  2 akkeLEaelqeLe 14
                 kk+LE e+qeL+
  KHJ31420.1 46 DKKNLEIERQELK 58
                69**********8 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 1.9
           M   5 eLEaelqeLeee 16 
                 e+E e+q Le+e
  KHJ31420.1  91 EVERERQLLESE 102
                 678888877764 PP

>> GTP-bdg_M  GTP-binding GTPase Middle Region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   2.8      0.02        16      45      77 ..       6      38 ..       1      40 [. 0.88
   2 ?    3.2   0.4      0.18   1.4e+02      44      64 ..      47      67 ..      41      70 .. 0.76
   3 ?    6.5   0.0     0.017        13       9      33 ..      71      95 ..      66     104 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.02
                XXXHHHHHHHHHHHHHHHHHHHHHHHHHH.... CS
   GTP-bdg_M 45 tkleldrrlireriaklkkeLekvkkkrelqrk 77
                + +e++r+ ++   ++l++e +++k++r+ + +
  KHJ31420.1  6 QDIETKRKILESEKQSLENEWKSLKSERQNLEE 38
                679*************************98766 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.18
                XXXXHHHHHHHHHHHHHHHHH CS
   GTP-bdg_M 44 etkleldrrlireriaklkke 64
                +++le++r++++ ++++l++e
  KHJ31420.1 47 KKNLEIERQELKVQMQDLENE 67
                467888888888888888765 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.017
                HHHHHHHHHHHHHHHCXXXXXXXXX CS
   GTP-bdg_M  9 lQVelAqlkyllprLeglgkelsrq 33
                +Q+e  +l+y++  L + + e +r 
  KHJ31420.1 71 IQIEWRELEYERKCLDNEWLEVERE 95
                69*************9999998886 PP

>> DUF3450  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5  11.8   0.00072      0.56      33      93 ..       6      66 ..       2      73 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00072
     DUF3450 33 aqsqkkidklddekqellaeyralkeeleslevyneqlerlvasqeqeiasleeqieeiee 93
                +++++k + l+ ekq+l++e ++lk+e ++le ++  le+  +++e e+++l+ q++++e+
  KHJ31420.1  6 QDIETKRKILESEKQSLENEWKSLKSERQNLEEEKLALEADKKNLEIERQELKVQMQDLEN 66
                5566677778888999999999999999999999999999999999999999999988876 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   7.2     0.002       1.5      69     131 ..       3      66 ..       1     109 [. 0.73

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.002
  V_ATPase_I  69 keldeleeelekleeelkelnenleklkkelnelvelkavlekakefleee.eeeeeeeeseee 131
                 ke++++e++ + le+e ++l+++ ++lk+e+++l+e+k  le  k+ le e +e + + ++ e+
  KHJ31420.1   3 KEMQDIETKRKILESEKQSLENEWKSLKSERQNLEEEKLALEADKKNLEIErQELKVQMQDLEN 66 
                 6899999999999999999999999999999999999999999999997653333322222222 PP

>> DUF3658  Protein of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   2.1    0.0003      0.23       2      30 ..       8      36 ..       7      38 .. 0.92
   2 ?   -2.1   0.0       4.5   3.5e+03      12      20 ..      53      61 ..      37      73 .. 0.55
   3 ?    2.2   0.5      0.21   1.7e+02      11      30 ..      80      99 ..      74     101 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.0003
     DUF3658  2 lkearplseeererlakeWqelkrenaeL 30
                ++++r++ e+e+++l++eW++lk+e+++L
  KHJ31420.1  8 IETKRKILESEKQSLENEWKSLKSERQNL 36
                57899*******************99876 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 4.5
     DUF3658 12 ererlakeW 20
                er++l+ + 
  KHJ31420.1 53 ERQELKVQM 61
                333333333 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.21
     DUF3658 11 eererlakeWqelkrenaeL 30
                 er+ l +eW e+ re++ L
  KHJ31420.1 80 YERKCLDNEWLEVERERQLL 99
                6889999*******998876 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   7.4    0.0034       2.6     162     232 ..      13      85 ..       2     109 .. 0.34

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0034
  Exonuc_VII_L 162 rlleekkqrleklasrlkspeellerkrqrldeleerleralkkqlkkkrerleelkerlk...ekleekkerl 232
                   + le++kq le+  ++lks ++ le+++ +l+  +++le   +++lk + ++le+  + ++   ++le +++ l
    KHJ31420.1  13 KILESEKQSLENEWKSLKSERQNLEEEKLALEADKKNLEI-ERQELKVQMQDLENEGKYIQiewRELEYERKCL 85 
                   2223333333333333333333333333333333333333.222333333333333322222232222222222 PP

>> HALZ  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   4.1    0.0037       2.9      23      41 ..      14      32 ..       7      41 .. 0.68
   2 ?    6.7   5.4     0.011       8.7      23      43 .]      42      62 ..      35      67 .. 0.80
   3 ?    0.7   0.8      0.79   6.2e+02      24      35 ..      92     103 ..      82     109 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0037
        HALZ 23 sLkkenekLkaelqeLkek 41
                 L+ e+++L++e ++Lk+ 
  KHJ31420.1 14 ILESEKQSLENEWKSLKSE 32
                5667777777777777654 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.011
        HALZ 23 sLkkenekLkaelqeLkeklq 43
                +L++++++L++e qeLk ++q
  KHJ31420.1 42 ALEADKKNLEIERQELKVQMQ 62
                588899999999999987664 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.79
        HALZ  24 LkkenekLkael 35 
                 +++e++ L++e+
  KHJ31420.1  92 VERERQLLESEM 103
                 567888888885 PP

>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5  11.2     0.013       9.9       6      54 ..       5      49 ..       1      60 [. 0.43
   2 ?    2.6   7.9       0.2   1.6e+02       3      43 ..      37      77 ..      36     109 .. 0.54

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.013
       Spc24  6 kfriakelsdleselesleselaelkeeleeleeesee..keservedetl 54
                 ++i  + + lese +sle+e ++lk+e ++leee+ +         d++ 
  KHJ31420.1  5 MQDIETKRKILESEKQSLENEWKSLKSERQNLEEEKLAleA------DKKN 49
                33444444444455555555555555555555444444221......3322 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.2
       Spc24  3 dnekfriakelsdleselesleselaelkeeleeleeesee 43
                ++ek+++  + ++le e ++l+ + ++l++e + ++ e  e
  KHJ31420.1 37 EEEKLALEADKKNLEIERQELKVQMQDLENEGKYIQIEWRE 77
                55566666666666666666666666666655555544444 PP

>> RTBV_P46  Rice tungro bacilliform virus P46 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   2.4    0.0015       1.2      67      99 ..      13      45 ..       4      68 .. 0.80
   2 ?    0.7   0.2      0.25   1.9e+02      69      91 ..      78     100 ..      69     106 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0015
    RTBV_P46 67 ylleseresyknewislkdqvsllqkqnselra 99
                 +lese++s +new slk +   l++++  l a
  KHJ31420.1 13 KILESEKQSLENEWKSLKSERQNLEEEKLALEA 45
                589***************988777766655554 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.25
    RTBV_P46  69 leseresyknewislkdqvsllq 91 
                 le er++  new+ ++ +  ll+
  KHJ31420.1  78 LEYERKCLDNEWLEVERERQLLE 100
                 899**********9988877775 PP

>> LCD1  DNA damage checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5  15.4     0.053        41      15      83 ..       6      73 ..       2     107 .. 0.58

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.053
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHTTTTTTHHHH------TT---SSS--T CS
        LCD1 15 keleklknskkqlkesheeelekLkkevqkleDekkFlenElrslsetksqaskksaeedtdnsssvsk 83
                +++e++++  +++k+s e+e ++Lk+e q+le ek+ le ++++l   ++q+ k + ++ +++ + ++ 
  KHJ31420.1  6 QDIETKRKILESEKQSLENEWKSLKSERQNLEEEKLALEADKKNLEI-ERQELKVQMQDLENEGKYIQI 73
                45566666666777777777777777777777777777777777665.355555555555544444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1905  (0.106252); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                       104  (0.00580066); expected 17.9 (0.001)
Passed Fwd filter:                        40  (0.00223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 0.60u 0.30s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 780.53
//
Query:       KHJ31421.1  [L=1314]
Description: putative phospholipid-translocating p-type atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-47  161.4  10.0    3.3e-47  161.4  10.0    2.3  3  PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-t
    1.3e-14   53.6   2.9    3.3e-14   52.3   2.9    1.7  1  PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
    5.8e-13   49.6   0.0    6.7e-08   33.1   0.0    3.0  3  Hydrolase        haloacid dehalogenase-like hydrolase
    1.9e-07   30.8   2.6    0.00063   19.3   0.0    2.7  2  E1-E2_ATPase     E1-E2 ATPase
    1.7e-05   24.8   0.0    0.00042   20.3   0.0    2.5  2  Cation_ATPase    Cation transport ATPase (P-type)
     0.0043   16.8   0.0      0.013   15.2   0.0    1.8  1  Hydrolase_3      haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6   0.4       5.2   1.5e+04      58      75 ..     185     201 ..     176     212 .. 0.61
   2 ?   -0.3   1.4      0.25   7.4e+02     120     201 ..     516     598 ..     496     624 .. 0.46
   3 !  161.4  10.0   1.1e-50   3.3e-47       2     243 ..    1078    1300 ..    1077    1306 .. 0.94

  Alignments for each domain:
  == domain 1  score: -4.6 bits;  conditional E-value: 5.2
  PhoLip_ATPase_C  58 gqslyeswlltlynllft 75 
                        +ly+++++ ++n+ f 
       KHJ31421.1 185 PKTLYNEFSF-FFNMYFL 201
                      4555666554.5555554 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.25
  PhoLip_ATPase_C 120 leglyqsliifflsylvlddssfs......dgktndlqlfgtlvftalvlvvnlkvaletk.....twtliliililgsillyflflllyssl 201
                       ++++ +++i+  + +       s      ++++++l ++ + + t ++++ +l++ +          + ++ + +++ i   + fl+l+s++
       KHJ31421.1 516 SNAIVFAVVIYTGPQTR------SalstssSRSKTGLLEYEINSLTKILCALTLTLSIVLVvlegiE-HNMNGVRWYVKI---MRFLVLFSTI 598
                      23333333333333333......22333446777777777766666666666666544322112211.123333333332...2222222332 PP

  == domain 3  score: 161.4 bits;  conditional E-value: 1.1e-50
  PhoLip_ATPase_C    2 raSDyaiaqFrfLkrLLlvhGrwsyrRisklilyffyKnvvftlvqfwfqfyngfsgqslyeswlltlynllftslpvivlgifdqdvsael 93  
                        a+D++i qF++L++LL++hGr+sy+R +kl ++++++ ++++++q+++++   f    ly++wll+ y +++t+ pv+ l ++d+dv+++l
       KHJ31421.1 1078 LAADFSIVQFCHLTKLLVWHGRNSYKRSAKLAQFVIHRGLIISICQAMYSIAIKFEPEGLYKDWLLVGYATIYTMAPVFSL-VLDKDVDENL 1168
                       69*****************************************************************************99.********** PP

  PhoLip_ATPase_C   94 llkyPelYklgqknklfnlktfllwileglyqsliifflsylvlddssfsdgktndlqlfgtlvftalvlvvnlkvaletktwtliliilil 185 
                       +  yPelYk+++++  ++++tf+lw+l ++yq+ +i  ls ++++         +d   +  ++ft+l+l  +++va+e++tw+ i+i++++
       KHJ31421.1 1169 ANLYPELYKELTTGASLSYRTFFLWVLVSVYQGSMIQGLSQILTQ---------VDGPRMVSVSFTVLILNELCMVAFEVTTWHPIMIFSLF 1251
                       ***************************************888875.........566789999***************************** PP

  PhoLip_ATPase_C  186 gsillyflflllyssllpsssefygvleelfsspsfwlvlllvvvvallpdllikvlk 243 
                       g+ l+++ ++ l+  ++         + +++ +++f + +l++++++l+p ++ k + 
       KHJ31421.1 1252 GTALIFLGSIPLLGGYF---------DLMFIPTWEFVWRVLVILAISLIPPYVGKQIW 1300
                       **999999999999953.........57899*******************99987665 PP

>> PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   2.9   1.1e-17   3.3e-14      12      63 ..     166     217 ..     155     221 .. 0.89

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 1.1e-17
  PhoLip_ATPase_N  12 kkyasNkIsTsKYtlltFlpknLfeqFrrvaNlYFLviailqliPqisplsp 63 
                       +y+ N +s++KYt ++Flpk L+++F+ + N+YFL++a+ q iP ++    
       KHJ31421.1 166 IRYPLNCVSNAKYTPFSFLPKTLYNEFSFFFNMYFLLVALSQAIPPLRIGYL 217
                      48*******************************************9876655 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.2   6.7e+03     113     152 ..     312     351 ..     240     375 .. 0.66
   2 !   33.1   0.0   2.3e-11   6.7e-08       2     156 ..     642     958 ..     641     999 .. 0.70
   3 !   13.0   0.0   3.2e-05     0.096     181     210 .]    1036    1063 ..    1020    1063 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.2
                 HHHTHHBHTTHHHHHHHHHHTTE.EEEEEESSEHHHHH.HHH CS
                 xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx.xxx RF
   Hydrolase 113 iadplkvkpeaaeavasLkaagi.evvlltgdnpetae.raa 152
                    +  +  +++e++ + ++ ++ +v  l+ d++ +a+  ++
  KHJ31421.1 312 GNRK--PTSKVREVICKSRDLKVgDVLKLSKDQRVPADvVIL 351
                 3333..666666777777777777777777777777774444 PP

  == domain 2  score: 33.1 bits;  conditional E-value: 2.3e-11
                 SEEEEESBTTTBCHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHETTTE................................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................. RF
   Hydrolase   2 ktvvfDkdGTLttgepsvedvivsaalalaaaletgsehpigkalvaaakarsgaltgfatfigrg................................. 67 
                 + ++ Dk+GTLt+ e++ ++v v                      v +a++   +++++ + +g+                                  
  KHJ31421.1 642 EYILSDKTGTLTQNEMEMKKVHVGT--------------------VSYANEAMDEISSYIR-QGFSvesnkpyklitpsstfttstsntsrsrrnigsr 719
                 67899***************99999....................4444444222222222.1111222233322222222222222235554434443 PP

                 ...........................HHHHTHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHH.................................... CS
                 ...........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................................... RF
   Hydrolase  68 ...........................ayaigkpewltaldippdlgaaigsaqsqgrtvall.................................... 103
                                             y+  +p                            +                                    
  KHJ31421.1 720 vrdvvlalalchnviptvedqngslvtSYQASSP----------------------------Deiaivqwtktvglqlihrdrnsmtlnsiesmqsivr 790
                 4444444433333333333333333333333333............................0333355666666666666666666666666666666 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
   Hydrolase 104 ................................................................................................... 103
                                                                                                                    
  KHJ31421.1 791 vrildifpftssskrmgiivqflenvepgendtnqgeiwffqkgadtvmssivaandwldeeaanmareglrtlvigrkyisfqqyqefarsyreasls 889
                 66666********************************************************************************************** PP

                 ..................TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTT CS
                 ..................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 104 ..................qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlG 156
                                   + ++l++  ++d+  + ++++  ++ L+ agi++++ltgd  eta+ +a    
  KHJ31421.1 890 isnrensmsrvvghylehDLELLGITGVEDK--LQKDVKPSLELLRNAGIKIWMLTGDKVETARCVAVSSK 958
                 ******************99***********..*******************************7765544 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 3.2e-05
                  HHHHHHTSTGGGEEEEESSHHHHHHHHHTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  181 aaireLqgkpeevamVGDgvnDaaalaaAg 210 
                   +ire+   +++v+ +GDg nD+++++aA+
  KHJ31421.1 1036 ILIREF--TKKRVCCIGDGGNDVSMIQAAD 1063
                  467787..5667****************98 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   2.1e-07   0.00063      17      48 ..     324     355 ..     275     363 .. 0.87
   2 !   10.3   0.7   0.00012      0.36      83     165 ..     522     605 ..     492     613 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 2.1e-07
                   EEEGGG--TTSEEEEETT-B--SEEEEEEE-S CS
  E1-E2_ATPase  17 eidakelvpGDivllkagdrvpaDgrivegsa 48 
                     ++++l++GD+++l + +rvpaD++i+++s+
    KHJ31421.1 324 ICKSRDLKVGDVLKLSKDQRVPADVVILKSST 355
                   4789************************9987 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00012
                   EEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTT.....HHHHHHHHHHHHHS-TTHHH CS
  E1-E2_ATPase  83 avVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvflialllgksla.....eallralallvaaiPcaLpl 165
                   avV+ tg +t+    a ++++++sk+  l+ ++++l+k+l ++ l+++++++++  + +++ +       ++r+l+l+  ++P+aL +
    KHJ31421.1 522 AVVIYTGPQTR---SALSTSSSRSKTGLLEYEINSLTKILCALTLTLSIVLVVLEGI-EHNMNgvrwyVKIMRFLVLFSTIVPIALRV 605
                   56666777764...56667777788999999*******************9999866.444445777788888999999999999976 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.4e-07   0.00042      17      83 ..     747     838 ..     708     842 .. 0.82
   2 ?    1.2   0.0      0.13   3.8e+02      11      36 ..     934     968 ..     927     998 .. 0.75

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.4e-07
  Cation_ATPase  17 vkllGnktEsALlvlaeklgldteelree...............tkkvqeipFnssrKrmsvvlkle..........pekkvrlyvKGApei 83 
                         +++E+A+++ ++ +gl+ +  +++                 ++ ++pF+ss Krm+++++            +++++  + KGA  +
     KHJ31421.1 747 SYQASSPDEIAIVQWTKTVGLQLIHRDRNsmtlnsiesmqsivrVRILDIFPFTSSSKRMGIIVQFLenvepgendtNQGEIWFFQKGADTV 838
                    4567899************66666666666666666666666669999*****************989999**9999999999999999765 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.13
  Cation_ATPase  11 nsekdevkllGnktEsALlvlaekl.........g 36 
                    n+  + + l+G+k E+A  v+++ +         +
     KHJ31421.1 934 NAGIKIWMLTGDKVETARCVAVSSKlvargqyiyT 968
                    566678999********999998886666555441 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   4.4e-06     0.013     202     227 ..    1042    1067 ..    1037    1085 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 4.4e-06
                   -GGGEEEEESSGGGHHHHHHSSEEEE CS
  Hydrolase_3  202 sleeviafGDgeNDieMLeaaglgvA 227 
                   ++++v  +GDg ND++M++aa++gv 
   KHJ31421.1 1042 TKKRVCCIGDGGNDVSMIQAADVGVG 1067
                   67899****************99995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       702  (0.0391544); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.85u 0.25s 00:00:01.10 Elapsed: 00:00:00.43
# Mc/sec: 9254.72
//
Query:       KHJ31422.1  [L=816]
Description: putative protein bni4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (816 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       883  (0.0492498); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.66u 0.25s 00:00:00.91 Elapsed: 00:00:00.42
# Mc/sec: 5837.76
//
Query:       KHJ31423.1  [L=848]
Description: putative ram signaling pathway protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.8e-50  170.4  19.6    4.2e-35  121.9   5.1    3.3  4  SOG2      RAM signalling pathway protein
    1.2e-13   51.0   1.6    0.00038   20.8   0.3    4.3  4  LRR_4     Leucine Rich repeats (2 copies)
    1.4e-13   50.4   8.1    6.7e-08   32.2   0.2    3.4  3  LRR_8     Leucine rich repeat
     0.0011   18.8   0.7         12    6.2   0.0    5.2  5  LRR_6     Leucine Rich repeat
  ------ inclusion threshold ------
      0.019   15.5   8.1         77    4.4   0.2    6.2  4  LRR_1     Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> SOG2  RAM signalling pathway protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   2.3      0.29     1e+03     197     254 ..      20      81 ..       3     110 .. 0.39
   2 ?   -3.8   1.1       1.5   5.4e+03     170     170 ..     318     318 ..     251     427 .. 0.46
   3 !  121.9   5.1   1.2e-38   4.2e-35       1     177 [.     431     601 ..     431     634 .. 0.80
   4 !   63.2   6.6   7.3e-21   2.6e-17     313     507 .]     625     828 ..     608     828 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.29
        SOG2 197 sstesrassvtytart....RhagsfsaqdveqGaaltplrsdqipfnl.........srsrrssssgnsa 254
                 +++ +r+   ++t+rt    R++ s s+  ++++++       q    +         ++ ++++s+ + a
  KHJ31423.1  20 ENGTPRTAPLITTRRTpkmlRSTVSNSSLSSQPSMSPH-----Q----FialareamkNALEENKSKAAEA 81 
                 22222222222334434444444433322222222111.....1....11122233332222222222222 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 1.5
        SOG2 170 k 170
                 +
  KHJ31423.1 318 R 318
                 1 PP

  == domain 3  score: 121.9 bits;  conditional E-value: 1.2e-38
        SOG2   1 YfrRLSvLPeetiskavkvpllelVdaaRglLFalsqihqairqitsfvkeeria.vslerllysasshidnLieaLerfdslesrr.gtpspsvdrav 97 
                 Y+r L +LP+ + ++ ++++ +   +aa+++L+al+q+h+ i++++s++ + + + + ler+ly+as+h+++L   ++ f  +++++  + ++++ ++v
  KHJ31423.1 431 YVRHLPSLPQCKRESDLPDSDV---EAAKSILYALFQVHPLIQSLLSVARDGTSKrSILERVLYNASTHVEELDKTIQEFMITSKQEeDKFNSRSSENV 526
                 9*******************99...*****************************99************************98855542455678999** PP

        SOG2  98 iklCktivsaFkkiisvLrknlkafvesdDvrYiRtllLmlygSmaEvrnawksiapeleavqplkptaskkkragrtks 177
                  ++C t+v a+  + ++L+ n++ ++e++  rY+RtllL+lygS+ E+ +a  ++     a ++ k    k++++++++ 
  KHJ31423.1 527 RHACVTCVNAYINVLNLLQSNIDSLIENAESRYVRTLLLLLYGSTCEIHSAHRKFLERG-ALESRK----KSRSINTLLI 601
                 ***************************************************99875555.444432....3333333332 PP

  == domain 4  score: 63.2 bits;  conditional E-value: 7.3e-21
        SOG2 313 sksrs....................ssrsntnasastprslattpappasaesfastltasrintlaa...vDeqlletletavklalvvysqlteeis 388
                 s+ +s                    ss    n + s  +++++ ++   + +sf  + ++++++++++   + e+++   + + ++  ++ + +++++ 
  KHJ31423.1 625 SRTTSatviqgfsgnqissnlylypSS----NGNRSVTNPNNNFQE---AHKSFSGSANQIYMSNSSEedkLLEKIFSRMQHTLEITIKAMPSVQNQFI 716
                 333333344444443332333333222....345566667777777...67776444459999999994444455***********************8 PP

        SOG2 389 kvaeassagqqrlteelakkirdLtdtcrqameltkaLrerLsllklkedlsekgsttsektklwedinaFlksivsilaliKel.slmhelPnevrpn 486
                  + +   + q +l+++ +  ++ L+++c  + +  +  ++++sl+k       k ++t+ + k+we++ + +k++ +++ ++Ke+ s+++ l+ +v+ +
  KHJ31423.1 717 TAMK--VNNQMSLPNQPKDIWQILIEKCLSVAQKAEMIKHAMSLIK------SKENGTRTHGKFWELCYSMIKTFTELVVKVKEAkSVTTLLSDDVIIT 807
                 8888..77999**********************************6......46699**************************9835788899****** PP

        SOG2 487 LaslakatkevtvlLdlsSyk 507
                 L++l+ka+ke+ +l++ s+++
  KHJ31423.1 808 LRPLQKAIKETSRLIQSSPWS 828
                 ********************6 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       3.7   1.3e+04       6      17 ..      94     105 ..      93     108 .. 0.76
   2 !   20.8   0.0   1.1e-07   0.00038       3      38 ..     116     151 ..     114     155 .. 0.85
   3 !   20.8   0.3   1.1e-07   0.00038       1      37 [.     160     196 ..     160     199 .. 0.87
   4 !   17.8   0.1   9.5e-07    0.0034       3      36 ..     185     218 ..     183     223 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 3.7
                 EE--SS---E-S CS
       LRR_4   6 LdLsnNqltdip 17 
                 +d+sn q++ +p
  KHJ31423.1  94 IDFSNKQIQRFP 105
                 788998998765 PP

  == domain 2  score: 20.8 bits;  conditional E-value: 1.1e-07
                 --EEE--SS---E-S-.HHH-TT--EEE-.-S----- CS
       LRR_4   3 LevLdLsnNqltdipl.leklpnLkeLdLsgNnlitd 38 
                 Le L Ls+Nq++ +p+ ++ +++L++L++ + n i+ 
  KHJ31423.1 116 LERLALSHNQISVFPSrFSECKSLRYLNV-RDNVIRE 151
                 99**************9778*********.5546665 PP

  == domain 3  score: 20.8 bits;  conditional E-value: 1.1e-07
                 SS--EEE--SS---E-S-.HHH-TT--EEE-.-S---- CS
       LRR_4   1 pnLevLdLsnNqltdipl.leklpnLkeLdLsgNnlit 37 
                 p+Le+Ld++ N+l+ +p+ + +l  Lk+L++  N +i+
  KHJ31423.1 160 PSLEILDFGRNKLKVLPSqIVGLSCLKVLSIQKN-RIE 196
                 79****************8889*********777.664 PP

  == domain 4  score: 17.8 bits;  conditional E-value: 9.5e-07
                 --EEE--SS---E-S-.HHH-TT--EEE-.-S--- CS
       LRR_4   3 LevLdLsnNqltdipl.leklpnLkeLdLsgNnli 36 
                 L+vL+++ N++  +pl l+ + +L++L L gN +i
  KHJ31423.1 185 LKVLSIQKNRIEILPLcLADMASLQVLKLDGN-PI 218
                 9***************8889*********999.55 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   3.6e-08   0.00013      26      61 .]     115     149 ..      94     149 .. 0.88
   2 !   32.2   0.2   1.9e-11   6.7e-08       1      61 []     160     218 ..     160     218 .. 0.95
   3 ?   -4.6   0.7         5   1.8e+04      28      41 ..     539     552 ..     538     555 .. 0.69

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 3.6e-08
                 T--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8  26 nLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                  L+ L Ls+N+++++ p  fs ++sLr+L++++N +
  KHJ31423.1 115 ELERLALSHNQISVF-PSRFSECKSLRYLNVRDNVI 149
                 69*************.9***************9965 PP

  == domain 2  score: 32.2 bits;  conditional E-value: 1.9e-11
                 TT-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   1 pnLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 p+L++Ld  +N+l++l+ +    ls LkvL++  N+++ l p ++++++sL+ L L+gN++
  KHJ31423.1 160 PSLEILDFGRNKLKVLPSQIVG-LSCLKVLSIQKNRIEIL-PLCLADMASLQVLKLDGNPI 218
                 789*************988777.*****************.9*****************97 PP

  == domain 3  score: -4.6 bits;  conditional E-value: 5
                 -EEE--SS---GGG CS
       LRR_8  28 kvLdLsnNllttls 41 
                 +vL+L + ++++l 
  KHJ31423.1 539 NVLNLLQSNIDSLI 552
                 57888888888775 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0      0.02        71       5      16 ..     116     127 ..     113     128 .. 0.90
   2 !    6.2   0.0    0.0034        12       2      15 ..     136     149 ..     135     150 .. 0.90
   3 ?    0.9   0.0      0.17   6.1e+02       3      15 ..     160     172 ..     158     173 .. 0.88
   4 ?    0.4   0.0      0.25   9.1e+02       3      15 ..     183     195 ..     181     196 .. 0.88
   5 ?   -1.5   0.0         1   3.6e+03       4      15 ..     207     218 ..     205     219 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.02
       LRR_6   5 LteLdLsgNdIg 16 
                 L+ L Ls+N+I+
  KHJ31423.1 116 LERLALSHNQIS 127
                 899*******96 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0034
       LRR_6   2 nthLteLdLsgNdI 15 
                 + +L++L++++N I
  KHJ31423.1 136 CKSLRYLNVRDNVI 149
                 789*********88 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.17
       LRR_6   3 thLteLdLsgNdI 15 
                 ++L+ Ld   N++
  KHJ31423.1 160 PSLEILDFGRNKL 172
                 79*********97 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.25
       LRR_6   3 thLteLdLsgNdI 15 
                 ++L+ L+++ N I
  KHJ31423.1 183 SCLKVLSIQKNRI 195
                 78*********98 PP

  == domain 5  score: -1.5 bits;  conditional E-value: 1
       LRR_6   4 hLteLdLsgNdI 15 
                 +L+ L L gN I
  KHJ31423.1 207 SLQVLKLDGNPI 218
                 799*******98 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1     0.094   3.4e+02       2      18 ..     116     132 ..     115     136 .. 0.84
   2 ?    4.4   0.2     0.021        77       1      22 [.     138     158 ..     138     159 .. 0.84
   3 ?    2.9   0.4      0.07   2.5e+02       1      18 [.     161     178 ..     161     204 .. 0.75
   4 ?    4.2   0.0     0.026        93       1      20 [.     207     225 ..     207     237 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.094
       LRR_1   2 LrhLdLsnnpllglppn 18 
                 L++L Ls+n+++ +p++
  KHJ31423.1 116 LERLALSHNQISVFPSR 132
                 89999******888876 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.021
       LRR_1   1 nLrhLdLsnnpllglppnsfqn 22 
                 +Lr+L++++n + +  p +++ 
  KHJ31423.1 138 SLRYLNVRDNVI-REFPLCICE 158
                 69********99.788888776 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.07
       LRR_1   1 nLrhLdLsnnpllglppn 18 
                 +L+ Ld ++n l  lp++
  KHJ31423.1 161 SLEILDFGRNKLKVLPSQ 178
                 589999999998555543 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.026
       LRR_1   1 nLrhLdLsnnpllglppnsf 20 
                 +L++L L +np+ ++pp  +
  KHJ31423.1 207 SLQVLKLDGNPI-RFPPKEI 225
                 69*********9.8888654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (848 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1147  (0.0639746); expected 358.6 (0.02)
Passed bias filter:                      589  (0.0328518); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.70u 0.25s 00:00:00.95 Elapsed: 00:00:00.39
# Mc/sec: 6476.98
//
Query:       KHJ31424.1  [L=252]
Description: putative dienelactone hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-26   93.3   0.0    1.9e-26   93.0   0.0    1.1  1  DLH       Dienelactone hydrolase family


Domain annotation for each model (and alignments):
>> DLH  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.0   0.0   1.1e-30   1.9e-26       1     216 [.      30     250 ..      30     251 .. 0.85

  Alignments for each domain:
  == domain 1  score: 93.0 bits;  conditional E-value: 1.1e-30
         DLH   1 idaylatpkna...kkpvvvviqeifGvndnikdiserlaeeGYvalaPdlYarqaldpndeaeaaraldelvs......kvaeekvlddlkaavaylk 90 
                 iday+a+p ++   +  +++ +++++G+ +n k +++++a++GY  l+ d + ++   + d++ +++ l  l +      + + e v  +++  +aylk
  KHJ31424.1  30 IDAYIAEPSDPnvhPNTAILFLPDVIGIWQNSKLMADQFASNGYTTLLIDTFNKDP-LSLDKPADFDFLGWLNKgstgnnPHTAEFVDPIVEKGLAYLK 127
                 79*******9999999****************************************.567777777766444331111112333455666688899999 PP

         DLH  91 svpevstkkvgvvGfCmGGalalllaaevpevdaavafYGlspekeleeaakikapilalfgeeDefipadevekleealkaanvdlelkvYpgagHaF 189
                  ++     k+g vG+C+GG+ +  l a ++ +d   + +++++  + ee a+ik+p  ++++e D++++ + ++k ee l++ + +++++++ g+ H+F
  KHJ31424.1 128 RNG---FTKIGGVGYCFGGKYVTRLLASGKGLDVGYVAHPSFV--TEEELANIKGPYSISAAEIDKIFTTELRHKSEEILIKTGLPYQINLFGGVSHGF 221
                 988...689**************99999999*********554..4567789*********************************************** PP

         DLH 190 andsre..syneeaaedawervlelfkqv 216
                 a + +   + ++ ++e+a+ +++++f ++
  KHJ31424.1 222 AVRCDLskKIEKFSKEKAFLQAVQWFDEH 250
                 9766543499999*************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1880.83
//
Query:       KHJ31425.1  [L=196]
Description: putative mitochondrial ribosomal [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-11   44.8   0.0    2.2e-11   44.0   0.0    1.4  1  Ribosomal_L23  Ribosomal protein L23
  ------ inclusion threshold ------
      0.024   14.7   0.0      0.049   13.7   0.0    1.5  1  bPH_4          Bacterial PH domain
        5.6    6.0   7.6        7.9    5.5   7.6    1.1  1  M16C_assoc     Peptidase M16C associated


Domain annotation for each model (and alignments):
>> Ribosomal_L23  Ribosomal protein L23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.0   3.6e-15   2.2e-11      21      81 ..      40     107 ..      27     110 .. 0.92

  Alignments for each domain:
  == domain 1  score: 44.0 bits;  conditional E-value: 3.6e-15
                    EEEEE-SS-THHHHHHHHHHHHT--EEEEEEEEE--EBE.......SSSSSEEBE--EEEEEEEESSS CS
  Ribosomal_L23  21 yvFeVakdanKleikkaveklFgVkVekVntlnvkgkkk.......rvgrkvgrrksyKkaiVtLkeg 81 
                    + F V++++nKl+++++++++++V+  +V+++++++k +       r +r+++r k++K++++++++g
     KHJ31425.1  40 ASFIVPLKFNKLDMRDYLWNMYNVRCLDVRSYIIQQKIQfdrpnviRPRREAYRPKAVKRMTIEMEQG 107
                    68*************************************9999999888889*************665 PP

>> bPH_4  Bacterial PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   8.2e-06     0.049       8      71 ..      64     139 ..      60     142 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 8.2e-06
       bPH_4   8 gvLliksGfirkkIpiedIkkirktksplsspalsldrleIkyg............kydtilisPkkkeeFieeLk 71 
                 ++L ++s +i++kI++++ + ir+ ++ +  +a  +  +e + g            +++t l s k++eeF e+Lk
  KHJ31425.1  64 RCLDVRSYIIQQKIQFDRPNVIRPRREAYRPKAVKRMTIEMEQGfvwpevgdlekwDHKTFLASEKEQEEFQEQLK 139
                 7899****************************999999999998**********77777799************98 PP

>> M16C_assoc  Peptidase M16C associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   7.6    0.0013       7.9       8      69 ..     127     187 ..     124     195 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0013
  M16C_assoc   8 eeekekeekerLaakkaslseeekekiveetkeLkerQekpdsedlscLPtLkleDIprei.t 69 
                 +e++++e +e+L+    +   +e+e i +++k Lke Q +   e++ + P   le+I+ e+ +
  KHJ31425.1 127 SEKEQEEFQEQLKPQARRNPTKERESIAQQAKSLKESQLRR--EQILMTPENDLEEIEVEAdV 187
                 6889999999**99999999********************9..99999999999999888743 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1376  (0.0767472); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1381.79
//
Query:       KHJ31426.1  [L=268]
Description: putative short chain dehydrogenase reductase family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-53  181.1   0.3    2.1e-53  180.7   0.3    1.1  1  adh_short        short chain dehydrogenase
    3.1e-34  118.6   0.2    3.8e-34  118.3   0.2    1.0  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
    9.2e-11   42.0   0.1    1.2e-10   41.6   0.1    1.1  1  KR               KR domain
     0.0088   16.3   0.1      0.017   15.4   0.1    1.5  1  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
  ------ inclusion threshold ------
      0.029   13.5   0.3      0.058   12.5   0.3    1.5  1  Polysacc_synt_2  Polysaccharide biosynthesis protein


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.7   0.3   5.8e-57   2.1e-53       1     186 [.      12     205 ..      12     210 .. 0.95

  Alignments for each domain:
  == domain 1  score: 180.7 bits;  conditional E-value: 5.8e-57
                 SEEEEESTTSHHHHHHHHHH...HHTT-EEEEEESCHHHHHHHHHHHHHT..TSEEEEEE-TTTSHHHHHHHHHHHHHHH..SSESEEEE---S.S--S CS
   adh_short   1 kvvlvtGassGIGraiakel...akeGakvvvvdrseekleevakelkee..gakalaiqvDvtdreevealvekavkkl..gkldvLvnNAGi.tgsg 91 
                 k++l+tGassGIGr +a e+   a+++ ++++v+r+ +kl+ev++++++e  g k+l++q+D++++ee++++ ++ +k+   g++d+L+nNAG+ +g++
  KHJ31426.1  12 KTILITGASSGIGRSTALEFsrvASNDLRLILVARRIDKLNEVKEQIQREvaGVKVLCAQLDISQKEEIDKFTSDLRKDSqwGNIDILINNAGLvKGVA 110
                 79***************76433389**************************************************9985444************99999 PP

                 SGGGCSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHH CS
   adh_short  92 pfselseeewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdm 186
                 +  ++s+++++ ++++N+tg++++t+a+lp +l++ +G+I+nv+S+ag++ ++g++ Y+A+Kaav+++t++l+kel +t+irv+ +aPG v+T++
  KHJ31426.1 111 QSPNISQQDIDIMFKTNVTGLISMTQAILPIFLAKGAGDIINVGSIAGRETYPGGSIYCATKAAVKSYTDALRKELISTRIRVMEIAPGQVETEF 205
                 99*******************************************************************************************97 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.3   0.2   1.1e-37   3.8e-34       1     227 [.      18     252 ..      18     254 .. 0.85

  Alignments for each domain:
  == domain 1  score: 118.3 bits;  conditional E-value: 1.1e-37
                   TTTTSHHHHHHHHH...HHTT-EEEEEESSGGH.HHHHHHHHHHTT.SEE..EE--TTSHHHHHHHHHHHHH..HHSSEEEEEE-----EGCSS-GG CS
  adh_short_C2   1 GaasgIGraiAkal...aeeGaevvltdlneea.kkrveelaeelg.aev..lecDVtdeeqvealveevve..kfgklDilvnnagiapklkgpfl 88 
                   Ga sgIGr +A ++   a++  +++l+ ++ ++ ++  e++++e+   +v   ++D++++e+++++ +++++  ++g++Dil+nnag ++   ++  
    KHJ31426.1  18 GASSGIGRSTALEFsrvASNDLRLILVARRIDKlNEVKEQIQREVAgVKVlcAQLDISQKEEIDKFTSDLRKdsQWGNIDILINNAGLVKG-VAQSP 113
                   899********977333679999**999999996777777777765355678*****************9873368**************9.77778 PP

                   GH-HHHHHHHHHHHTHHHHHHHHHHHH.HCTSC.CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGST CS
  adh_short_C2  89 etsreefdraldvnlyslfllakaalp.lmkeg.gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgik 183
                   ++s++++d ++++n+++l+++++a+lp  +++g g i+n+ s++++ + p+ ++y+a+Kaa+++ t +l +el + +iRv  ++pg ++T+ +    
    KHJ31426.1 114 NISQQDIDIMFKTNVTGLISMTQAILPiFLAKGaGDIINVGSIAGRETYPGGSIYCATKAAVKSYTDALRKELISTRIRVMEIAPGQVETEFSVVRY 210
                   ***************************8666667********************************************************9954443 PP

                   THHHHHHHHHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEE CS
  adh_short_C2 184 gfdelleelearaplgrlgtpeevaeaalfLasdeasyitGqtl 227
                     d  +++++a +   +  tp+++ae+++f a  + + +   tl
    KHJ31426.1 211 YGD--KSKADAVYAGCEPLTPDDIAEVIVFAAGRRENVVIADTL 252
                   223..33444555666778***********99988887776665 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.1   3.4e-14   1.2e-10       2     164 ..      13     183 ..      12     202 .. 0.84

  Alignments for each domain:
  == domain 1  score: 41.6 bits;  conditional E-value: 3.4e-14
                 EEEEETTTSHHHHHHHHHHHHHH..S-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHS..S---EEEE------.-- CS
          KR   2 tylitGGlGgLGlelarwlaekg..arhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaee..ppikGvihaAgvlr.dk 95 
                 t litG+  g+G+++a    + +    +l+l++R+  + ++ k++i++ e  g++v ++++D+s+k+++ +  ++++++   ++i   i+ Ag+++  +
  KHJ31426.1  13 TILITGASSGIGRSTALEFSRVAsnDLRLILVARRIDKLNEVKEQIQR-EVAGVKVLCAQLDISQKEEIDKFTSDLRKDSqwGNIDILINNAGLVKgVA 110
                 679***************98866337789******9888999988874.667*************************999899**********998467 PP

                 -TTT--HHHHHHHHTTTTHHHHHHHHHTTT....S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHH CS
          KR  96 lleemtaedleqvlapKvkGawnLhelled....esldffvlfSSiagllgsagqanYaaaNaflDalaeyrr 164
                 +  + +++d++ +++  v+G+  + +++ +    +    ++ + Siag    +g + Y a+ a + ++ +  r
  KHJ31426.1 111 QSPNISQQDIDIMFKTNVTGLISMTQAILPiflaKGAGDIINVGSIAGRETYPGGSIYCATKAAVKSYTDALR 183
                 7889**********************99887776777778999999999999999999887765555444433 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   4.7e-06     0.017       1      65 [.      14      82 ..      14     107 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4.7e-06
                     EEEE--.SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHH....TTTCEEEEE--TTTHHHHHHH CS
  Sacchrp_dh_NADP  1 vliiGa.GsvGqavaellarhfdvdaeitvadrskeklealaaka....lgvrfeaialdaenyeavLaa 65
                     +li Ga  ++G+++a + +r  + d +++++ r  +kl+++++++    +gv++ +++ld++++e+ +++
       KHJ31426.1 14 ILITGAsSGIGRSTALEFSRVASNDLRLILVARRIDKLNEVKEQIqrevAGVKVLCAQLDISQKEE-IDK 82
                     78999999***************999****************999******************999.665 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.3   1.6e-05     0.058       1     168 [.      14     210 ..      14     214 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.6e-05
                      EEEETTTSHHHHHHHHHHHHH..B-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT.........T-SEEEE-- CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkk..kpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleel.......kvdvvfhaA 85 
                      +l+tGa+  iG++   ++ +   +  ++il+ r   kl e+++++++e++  k+    ++   d+ +ke+++k  ++l       ++d++++ A
       KHJ31426.1  14 ILITGASSGIGRSTALEFSRVasNDLRLILVARRIDKLNEVKEQIQREVAGVKV----LCAQLDISQKEEIDKFTSDLrkdsqwgNIDILINNA 103
                      89***********99999887445567889999999********9888887544....455778888888888776541112222467777766 PP

                      --.--H...HHHHHSHHH.HHHHHHHH....HHHHHHHHHHTT-SEEEEEEE..GGGSS-.-SHHHHHHHHHHHHHHHGGG--SSS-....... CS
  Polysacc_synt_2  86 Al.KhV...Plveenple.aiktNvlg....tenvieaaieagvkkvvliSt..DKAvnP.tnvmGatKrlaekllqalakeseekk....... 160
                       l K V   P + ++ ++ ++ktNv+g    t+ ++ + +++g  +++ + +   +  +P  +++ atK++   ++ al+ke  +++       
       KHJ31426.1 104 GLvKGVaqsPNISQQDIDiMFKTNVTGlismTQAILPIFLAKGAGDIINVGSiaGRETYPgGSIYCATKAAVKSYTDALRKELISTRirvmeia 197
                      5426553335555444431678898884433444445556777777777654223334442578888888888888888888777776777777 PP

                      .....-EEEEEEE CS
  Polysacc_synt_2 161 .....tkfvvvRf 168
                           t+f+vvR+
       KHJ31426.1 198 pgqveTEFSVVRY 210
                      7777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       778  (0.0433934); expected 358.6 (0.02)
Passed bias filter:                      627  (0.0349713); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 1988.31
//
Query:       KHJ31427.1  [L=390]
Description: putative mt-a70 family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-32  111.7   1.7    5.5e-32  111.0   1.7    1.3  1  MT-A70    MT-A70
  ------ inclusion threshold ------
       0.13   10.8   0.8       0.17   10.4   0.8    1.1  1  CCDC154   Coiled-coil domain-containing protein 154


Domain annotation for each model (and alignments):
>> MT-A70  MT-A70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.0   1.7   6.2e-36   5.5e-32       1     171 [.     202     373 ..     202     374 .. 0.86

  Alignments for each domain:
  == domain 1  score: 111.0 bits;  conditional E-value: 6.2e-36
                 ECEEEE---BHHCC..HTT...--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHH.HHHHHHHCT-EEEEEEEEEEE-TTSCBS-BS-TTSSS CS
      MT-A70   1 fdviiidPpweeklvarkk...elpyktlneeelkaLpipelldkrslvflWvtnrellel.krellkkWglelveeltwlkinklgepiatlesgavl 95 
                 f++i +dPpw +++ +r+      +++   e+ l+ +pi + l+++++v++Wvtn+ + +    +++k+W+++++ee++wlk++ lgepi++ +s    
  KHJ31427.1 202 FSIITADPPWPNRSAKRNGdylISNKYSEIENLLLSIPIRHHLTDNGIVAIWVTNKLKFQSlVLKIFKQWNINVIEEWIWLKTTVLGEPIFPITS--LW 298
                 899***********9999887423333344556889**********************999899***************************7554..48 PP

                 BB-EEEEEEEEES---TTT.TTB-TTSSBSEEEEE-CTTTSS-THHHHHHHHHC....TCS-EEEET--G--TTEEEEET CS
      MT-A70  96 kkskEhllvgvkgnvkrstdkiinknvdtdliisperehsrKPpelfellehll....esarkLelFaRslrpgwltvGn 171
                 +k++E llvg k    +s+    + n ++ ++++  + hsrKP+ l elle++     ++   Le+FaR+l+ gw ++G 
  KHJ31427.1 299 RKPYELLLVGRKVAKAESI----DINLKKRVLVGVPDLHSRKPN-LKELLEKVFgfehNNYMGLEIFARNLTTGWWSWGC 373
                 9*********999887665....55899****************.777777777695555559****************6 PP

>> CCDC154  Coiled-coil domain-containing protein 154
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.8   1.9e-05      0.17     390     454 ..      60     121 ..      53     165 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 1.9e-05
     CCDC154 390 eewekaerrsleklvqwekeveahLrevqekvdslkrqieavsdkCvlhksdsdlkisaEekare 454
                 + +e++e +s+++l   ++ ve  L+e++  +d+ k  ++ v++k v+  sd ++kis + +   
  KHJ31427.1  60 KVLENKESQSIKDL-ILKRYVEFALEEIRHNIDRRKWCLDRVTNKAVI--SDENVKISRDRTCPS 121
                 557999********.6899****************************9..899****98776555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       471  (0.0262703); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2802.12
//
Query:       KHJ31428.1  [L=686]
Description: putative leucine rich repeat domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00014   21.7   1.8    0.00027   20.8   0.5    2.3  2  F-box-like  F-box-like
     0.0075   16.1   0.4     0.0075   16.1   0.4    2.9  3  F-box       F-box domain
  ------ inclusion threshold ------
        0.1   12.7   0.0       0.25   11.5   0.0    1.6  1  Imm39       Immunity protein 39
       0.17   11.5   0.2       0.35   10.5   0.2    1.5  1  F-box_5     F-box
       0.31   11.5  27.0       0.52   10.8   3.5    7.0  8  LRR_4       Leucine Rich repeats (2 copies)


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.5   7.5e-08   0.00027      15      44 ..      23      50 ..      16      54 .. 0.83
   2 ?   -3.2   0.0       2.3   8.3e+03       7      16 ..     390     399 ..     389     403 .. 0.73

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 7.5e-08
  F-box-like 15 yLppsdLlrlalVCrrWrrvaldtplLWrr 44
                +++ +dLl+++lVCr+W+++  +  +LW +
  KHJ31428.1 23 FVERKDLLSACLVCRKWHQIF-SI-RLWGN 50
                66889***************7.55.89965 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.3
  F-box-like   7 EiLlqIFsyL 16 
                 Ei + IF +L
  KHJ31428.1 390 EIFSAIFKRL 399
                 8888999877 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.4   2.1e-06    0.0075      10      37 ..      16      43 ..       9      48 .. 0.85
   2 ?   -2.4   0.1       1.3   4.7e+03      13      26 ..     143     156 ..     137     159 .. 0.73
   3 ?   -1.7   0.1      0.83     3e+03       2      18 ..     383     399 ..     382     406 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2.1e-06
                HHHHHHHTS-HHHHHHHCTT-HHHHHHH CS
       F-box 10 vlrhILerLplsdllalrrVSkgwrili 37
                ++ ++ ++++ +dll++ +V+++w+++ 
  KHJ31428.1 16 LWPEVARFVERKDLLSACLVCRKWHQIF 43
                66788899*****************964 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.3
                 HHHHTS-HHHHHHH CS
       F-box  13 hILerLplsdllal 26 
                  I ++L++ d  +l
  KHJ31428.1 143 LIVSNLSFFDHQSL 156
                 68999999996554 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.83
                 HHHHS-HHHHHHHHHTS CS
       F-box   2 tlsrLPsevlrhILerL 18 
                 t+  L se+   I++rL
  KHJ31428.1 383 TIQLLDSEIFSAIFKRL 399
                 67889999999****98 PP

>> Imm39  Immunity protein 39
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     7e-05      0.25      57      88 ..     275     306 ..     244     314 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 7e-05
       Imm39  57 ekdllipkyerinkkyselpvevelkleilet 88 
                  k++   +y+rin +y++lp+ + +  e++et
  KHJ31428.1 275 YKNEYFSNYKRINYRYADLPLSLRVSHEGIET 306
                 599999****************9999998886 PP

>> F-box_5  F-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.2   9.8e-05      0.35      18      35 ..      25      42 ..      11      45 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 9.8e-05
                -HHHHHHHTTS-HHHHHH CS
     F-box_5 18 sprDRnAvSlVCkrWYei 35
                +++D  ++ lVC++W++i
  KHJ31428.1 25 ERKDLLSACLVCRKWHQI 42
                47888899********97 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.1     0.038   1.4e+02      19      33 ..     134     147 ..     130     169 .. 0.77
   2 ?    1.9   0.1     0.089   3.2e+02      18      33 ..     188     204 ..     170     222 .. 0.72
   3 ?    6.8   0.3    0.0027       9.8       8      35 ..     232     255 ..     221     268 .. 0.81
   4 ?   10.8   3.5   0.00014      0.52       3      40 ..     330     369 ..     329     373 .. 0.79
   5 ?   -0.9   0.0      0.71   2.5e+03       2      12 ..     398     407 ..     385     420 .. 0.54
   6 ?   -2.3   0.0       1.9   6.9e+03      22      32 ..     500     510 ..     493     522 .. 0.77
   7 ?   -0.3   0.0      0.45   1.6e+03      21      30 ..     557     567 ..     547     576 .. 0.78
   8 ?   -0.8   0.1      0.66   2.4e+03      13      36 ..     624     648 ..     621     656 .. 0.64

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.038
                 HHH-TT--EEE-.-S CS
       LRR_4  19 leklpnLkeLdLsgN 33 
                 le lpnL++L + +N
  KHJ31428.1 134 LEYLPNLQSLIV-SN 147
                 556999999944.55 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.089
                 -.HHH-TT--EEE-.-S CS
       LRR_4  18 l.leklpnLkeLdLsgN 33 
                 + l+ +++L +LdLs  
  KHJ31428.1 188 NaLRYFKSLIYLDLSAT 204
                 34667999999999765 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0027
                 --SS---E-S-HHH-TT--EEE-.-S-- CS
       LRR_4   8 LsnNqltdiplleklpnLkeLdLsgNnl 35 
                 L++N l ++++    p+L++Ld+s+N +
  KHJ31428.1 232 LRDNDLNSLSF---PPQLRSLDISEN-F 255
                 56677777777...899******999.4 PP

  == domain 4  score: 10.8 bits;  conditional E-value: 0.00014
                 --EEE--SS---E-S-...HHH-TT--EEE-.-S-----GG CS
       LRR_4   3 LevLdLsnNqltdipl...leklpnLkeLdLsgNnlitdld 40 
                 L +L+L++N+lt  ++   ++ +  L+ Ld+ gN ++++l+
  KHJ31428.1 330 LNHLHLASNRLTINSFcriFGHNQYLQNLDI-GNLQLNRLS 369
                 88**********8777554446999******.997777776 PP

  == domain 5  score: -0.9 bits;  conditional E-value: 0.71
                 S--EEE--SS- CS
       LRR_4   2 nLevLdLsnNq 12 
                 +L++L  ++  
  KHJ31428.1 398 RLKSLRVHH-S 407
                 444454444.2 PP

  == domain 6  score: -2.3 bits;  conditional E-value: 1.9
                 -TT--EEE-.- CS
       LRR_4  22 lpnLkeLdLsg 32 
                 lpn + L+L+g
  KHJ31428.1 500 LPNIRLLTLTG 510
                 89999999965 PP

  == domain 7  score: -0.3 bits;  conditional E-value: 0.45
                 H.-TT--EEE- CS
       LRR_4  21 k.lpnLkeLdL 30 
                 + l+ Lk+L+L
  KHJ31428.1 557 SrLKELKTLTL 567
                 3399*****99 PP

  == domain 8  score: -0.8 bits;  conditional E-value: 0.66
                 --E-S-HH.H-TT--EEE..-.-S--- CS
       LRR_4  13 ltdiplle.klpnLkeLd..LsgNnli 36 
                 +  i+ ++ k+++L  L+  L  Nn i
  KHJ31428.1 624 IDVISIIKeKCKKLLDLHheL--NNII 648
                 555556444688888888777..4344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (686 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.30s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 4440.85
//
Query:       KHJ31429.1  [L=118]
Description: hypothetical protein EV44_g4268 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.019   15.1   0.1      0.034   14.2   0.1    1.4  1  Annexin   Annexin


Domain annotation for each model (and alignments):
>> Annexin  Annexin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   1.9e-06     0.034       2      36 ..      30      66 ..      29      67 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.9e-06
                HHHHHHHHHSSSS.SCHHH.HHHHHHHSTHHHHHHHH CS
     Annexin  2 dAelLkkamkglG.tdekt.lieIlatRsnaqlqaif 36
                d + L++++++lG t+ek+ +i+Il+ R  +++++i 
  KHJ31429.1 30 DSKSLYECISKLGtTQEKRlMIDILCLRESYERREIT 66
                67789********544444379*************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       514  (0.0286686); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 871.36
//
Query:       KHJ31430.1  [L=418]
Description: putative ketol-acid reductoisomerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      5e-48  162.8   0.0    7.7e-48  162.2   0.0    1.2  1  IlvN           Acetohydroxy acid isomeroreductase, NADPH-bind
    3.2e-40  137.8   0.2    5.3e-40  137.0   0.2    1.4  1  IlvC           Acetohydroxy acid isomeroreductase, catalytic 
  ------ inclusion threshold ------
       0.11   13.1   0.2       0.41   11.2   0.1    2.1  2  F420_oxidored  NADP oxidoreductase coenzyme F420-dependent


Domain annotation for each model (and alignments):
>> IlvN  Acetohydroxy acid isomeroreductase, NADPH-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.2   0.0   1.3e-51   7.7e-48       2     161 ..      96     261 ..      95     263 .. 0.94

  Alignments for each domain:
  == domain 1  score: 162.2 bits;  conditional E-value: 1.3e-51
                 HHTS-EEEES-SHHHHHHHHHHHHTT--EEEEE-TT-HHHHHHHHTT-....EEEEHHHHHHT-SEEEE-S-HHHHHHHHHHHTGGG--TT-EEEESSS CS
        IlvN   2 lkgkkiaviGyGsqGhaqalnlrdsgldvvvglregsksvkkAkeegf....evltvaeavkkadvvmiliPDelqkevyeeeiepnlkegkalafahG 96 
                 +k+ ++a+iGyGsqGhaq+ln+rd+gl+vvvg+r++++s+++A+ +g+    +  +++ea+++  +vm+l+ D +q++ +  +i+p ++++k+l f+hG
  KHJ31430.1  96 FKNDTMAIIGYGSQGHAQSLNMRDQGLNVVVGVRKDGASWREAEGDGWvpgrNLFDIDEAISRGTIVMNLLSDAAQSSTW-PSIKPLITKDKTLYFSHG 193
                 58899*****************************************8733335789************************.99**************** PP

                 HHHHTT...SS---TTSEEEEEEESS-SHHHHHHHHTT----EEEEEEE-SSS-HHHHHHHHHHHTTH CS
        IlvN  97 fnihfg...likppkdvdvvlvAPkgpGhlvreeyeegkGvpaliaveqdasgkakelalayakgiGa 161
                 f+++f+   ++++p+dvdv+lvAPkg G++vr+ ++eg+G+ + iav+qd +g+ake+a+a+  g+G+
  KHJ31430.1 194 FSVVFKkqtKVDVPEDVDVILVAPKGSGRTVRSLFKEGRGINSSIAVYQDLTGQAKEKAIALGVGVGS 261
                 ****973335999****************************************************997 PP

>> IlvC  Acetohydroxy acid isomeroreductase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.0   0.2   8.8e-44   5.3e-40       1     143 [.     269     413 ..     269     414 .. 0.95

  Alignments for each domain:
  == domain 1  score: 137.0 bits;  conditional E-value: 8.8e-44
                 HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTT--HHHHHHHHTHHH.HHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHS-HHHHHHHHHHHHH CS
        IlvC   1 FkeEtetDlfgEqavLcGgvselveagFetlveaGyspelAyfeclhel.klivdliyegGiakmresiSdtaeygdltagprviteevkeemkeilee 98 
                 F++E+++Dl+gE+++L+G++++++ a++e+l+++G+sp++A++e+++e+ +++++li  +G+++m+e++S+ta++g+ ++  r+ +e+ k+++ e++++
  KHJ31430.1 269 FQKEVYSDLYGERGCLMGAIHGMFLAQYEVLRQRGHSPSEAFNETVEEAtQSLYPLIGANGMDWMYEACSTTARRGAIDWSGRF-KEKLKPVFDELYDS 366
                 99**********************************************99**********************************.************** PP

                 HHTTHHHHHHHHH..HHTTSHHHHHHHHHHHTSHHHHHHHHHHHCHT CS
        IlvC  99 iqsGefakeviee..nkagrpelkklrkeeaeheiekvgkklralmp 143
                 ++sG+++++ ++   +k+ r+++++ +ke +e ei+++gk++r+l+p
  KHJ31430.1 367 VESGKETERSLAYnsQKDYREKYEQEMKEIRELEIWRAGKTVRSLRP 413
                 *********9999544447888999999999*************997 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   6.9e-05      0.41       2      41 ..     101     137 ..     100     188 .. 0.81
   2 ?   -1.1   0.0      0.51     3e+03      38      69 ..     186     217 ..     156     221 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 6.9e-05
                    EEEETTSHHHHHHHHHHHHTTS-GGCEEEEEESSCCCHHH CS
  F420_oxidored   2 igiiGaGnmgealasgllaagaqpheivvansrnpekaee 41 
                    ++iiG+G++g+a  +++  +g    ++vv+ +++  + +e
     KHJ31430.1 101 MAIIGYGSQGHAQSLNMRDQG---LNVVVGVRKDGASWRE 137
                    69*******************...****996655555544 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.51
                    CHHHHHHHHC-EEECECHHHHHHH-SEEEE-S CS
  F420_oxidored  38 kaeelaeelgvkvtavdneeaaeeadvvvlav 69 
                    k  ++   ++v  ++ ++ ++ e+ dv+++a 
     KHJ31430.1 186 KTLYFSHGFSVVFKKQTKVDVPEDVDVILVAP 217
                    55556666667777778899999999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (418 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       766  (0.0427241); expected 358.6 (0.02)
Passed bias filter:                      611  (0.0340789); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 3174.94
//
Query:       KHJ31431.1  [L=264]
Description: putative gtp cyclohydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-74  249.2   0.5    1.9e-74  248.9   0.5    1.1  1  GTP_cyclohydroI  GTP cyclohydrolase I
     0.0062   16.7   0.0      0.015   15.4   0.0    1.7  1  QueF             QueF-like protein


Domain annotation for each model (and alignments):
>> GTP_cyclohydroI  GTP cyclohydrolase I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.9   0.5   2.1e-78   1.9e-74       1     178 [.      83     260 ..      83     261 .. 0.98

  Alignments for each domain:
  == domain 1  score: 248.9 bits;  conditional E-value: 2.1e-78
                      HHHHHHHHHHHTT--TTSTTTTTHHHHHHHHHHHHTGGGGS-G.GGGGSSEEETT--S-EEEEEEEEEEEETTT--EEEEEEEEEEE-TTEEE- CS
  GTP_cyclohydroI   1 ieeavreiLealgedpereglketpkRvakayeelfkgleedpkekvlkkvfeeekdemvlvkdiefsSlCeHHllpfigkahvaYiPkkkviG 94 
                      i++avr+i+e lgedp+regl +tp+R+aka+  +++g++e+ k+ v +++f+e+++e+v+vkdie++SlCeHH++pf+gk+h++YiP+k viG
       KHJ31431.1  83 IANAVRTIIECLGEDPDREGLLQTPERYAKAMLYFTQGYQENVKDIVNDAIFHEGHNELVIVKDIEIFSLCEHHMVPFTGKMHIGYIPNKDVIG 176
                      6789***************************************98999********************************************** PP

                      HHHHHHHHHHHHSSEE-HHHHHHHHHHHHHHHH--SEEEEEEEEEEHHHHSSTT--TT-EEEEEEEEEHHHH-HHHHHHHHHHH CS
  GTP_cyclohydroI  95 lSklaRivdvvarrlqvQErlteqiadaleevlkpkgvavvieaehlCmtmrgvkkkesktvtsalrGefkedaalreefleli 178
                      +Skl+Ri+d+++rrlq+QErlt+++a+a++e+lkp+gvavv+e++hlCm mrgv+k++++t+ts++ G +++  ++r+ef++l+
       KHJ31431.1 177 ISKLPRIADMFSRRLQIQERLTTDVAHAIMEILKPQGVAVVMESSHLCMVMRGVQKTSATTITSCVLGCLEKRDKTRNEFFSLV 260
                      *********************************************************************************986 PP

>> QueF  QueF-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.7e-06     0.015       4      59 ..     162     217 ..     159     222 .. 0.94

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.7e-06
        QueF   4 atlvirYvpdkkvvelkslklYlisfrnrgifhEevvnrilddlvealkPkwlevv 59 
                 ++++i Y+p+k v+    l +    f +r + +E  +  +++ ++e lkP+ + vv
  KHJ31431.1 162 GKMHIGYIPNKDVIGISKLPRIADMFSRRLQIQERLTTDVAHAIMEILKPQGVAVV 217
                 789************************************************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       641  (0.0357521); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2061.97
//
Query:       KHJ31432.1  [L=216]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      0.009   15.6   0.1      0.015   14.8   0.0    1.4  1  BURP      BURP domain


Domain annotation for each model (and alignments):
>> BURP  BURP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   8.6e-07     0.015      55     142 ..     122     211 ..      75     214 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 8.6e-07
        BURP  55 ikegsaeakeiketleeCeappikgekkaCatSlesmvdfaasvlg..tkdvralstevekesaelqeytvaavkkvegekvvaCHkmay 142
                 i++++++a+ ++ +l+ C a+  + +    ++ ++s  +fa+  l   ++ +  + ++v   + +    ++  v+k++ +k+ +CH+ ++
  KHJ31432.1 122 IQSEERRAAMMAANLKICTAAINEVQVALTTAEMDSNKEFAQGLLTyfRATFAQFIANVSGSTLPVVPTDLYPVRKLSFKKSFSCHQAKF 211
                 467788999**********9777778888888999**********98888899999999999999**********************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       700  (0.0390429); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1757.85
//
Query:       KHJ31433.1  [L=494]
Description: hypothetical protein EV44_g6463 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.059   13.2   1.7       0.15   11.9   1.7    1.7  1  MCPVI     Minor capsid protein VI


Domain annotation for each model (and alignments):
>> MCPVI  Minor capsid protein VI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.7   8.1e-06      0.15     106     203 ..     200     301 ..     159     306 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 8.1e-06
                 XXXXXXXXXXXXX.XXXXXXXX..XXXXXXXXX..XXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       MCPVI 106 kalGeerpatqeeleaLiaald..pkdeeavkq..geptveP.iaPeaksvlvPvtldlpesvdevkkPvlssesavvvsrPsrlelrraaskrrrkRk 199
                     e +  t++e +++i++    pk    v+   + +  +P i  + +s l+ ++l++p+     ++Pv+s ++ ++v+ Ps  +l   +s   +k +
  KHJ31433.1 200 YNKYEAGADTKKEENTIISSDTfsPK-SAKVEDklSSKEPRPsIESNSTSQLLITELEFPKNHIRSSPPVTSENTDHAVQAPSPNNLNINSSIDAKKLT 297
                 55556666677776677765444444.333333013333444366677888899*****************************9999988888777777 PP

                 XXXX CS
       MCPVI 200 rasg 203
                 r s+
  KHJ31433.1 298 RMSN 301
                 7665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       908  (0.0506442); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3745.35
//
Query:       KHJ31434.1  [L=505]
Description: putative cysteine synthase b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.8e-28   98.8   0.0    7.2e-28   97.8   0.0    1.4  1  PALP       Pyridoxal-phosphate dependent enzyme
    2.5e-07   31.2   0.0      5e-07   30.2   0.0    1.6  1  Rhodanese  Rhodanese-like domain


Domain annotation for each model (and alignments):
>> PALP  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.8   0.0     8e-32   7.2e-28       9     281 ..      29     294 ..      24     303 .. 0.87

  Alignments for each domain:
  == domain 1  score: 97.8 bits;  conditional E-value: 8e-32
                 -EEEECCTC...CCCCCEEEEEEGGGSTTSBTTHHHHHHHHHH.HHTTTTTSEEEEEBSSHHHHHHHHHHHHH.T-.EEEEEEETTS-HHHHHHHHHTT CS
        PALP   9 Plvrlprls...kelgvplflKlEslnptgSfKdRgaeyllar.lkegtgaktvveassGNhgralAaaaall.Gl.kvtivvpadaspekvallrllG 101
                 Plv++p+      + gv++++Kl  + p   +K + a +ll++ +    ++k++ve ssG + +++++ a+ l G+ + + +++++a   k+ llr +G
  KHJ31434.1  29 PLVEIPQKLnpfYDDGVRIYAKLMTTLPAKNVKSLPALSLLSSpEISS-QTKRIVEYSSGSTIMSISMLARILhGIeDTHSYLSNKADLKKINLLRFFG 126
                 666666554444556888*************************65555.9***********************9**9********************** PP

                 -EEEEE.......CCHHHHHHHHHHHHHHHSTTCEE--TTTSHHHHHH.HHTHHHHHHHHTTTTEEEEEEE-SSSHHHHHHHHHHHHHSTT-EEEEEEE CS
        PALP 102 aevvev.......ggdydeavaaaaelaaegegaylvsqfdnptvieg.ygtiglEileqlggkpdavvvpvGgGgliaGiaaglkerrpdvrvigvep 192
                  ++ ++       ++d      +a++l +e+e +y+ +q++n +++ + y+++g++il+q+ + ++ + +++G+ g+++G++ +lk++rp+v  +gv++
  KHJ31434.1 127 LKISLFsgpsqpePDDARGGIMRAQKLGEEDETVYNPNQYENDLNWKAhYQWTGPQILKQM-PYLNIFCAGIGTSGTVTGVGLYLKKHRPEVFRVGVNN 224
                 ******98775444444444455899***********************************.6**********************************99 PP

                 CTTCGGTTCCS..S.SS..B.SSS.CCSTCS..CGTTCCHHHHSEEEEEEEEEEHHHHHHHHHHHHHHHSB-B-HHHHHHHHHH.HHHHHHC CS
        PALP 193 egsdalarslragrrvtvpvsdtiadglavg..spselafelldrlvdeivtvsdeealeamrllarregivvepssaaalaal.klreage 281
                    + + +++                  +v+  +p  + +   ++ vd+i  v + + ++    l  reg++v+pss+ +l++l + +++++
  KHJ31434.1 225 HPTEIVPGTR------------------SVPlmEPVKFPW---REAVDTIEVVGSFDSYRLSLALS-REGLLVGPSSGLNLQGLlDFLKRRK 294
                 9999999999..................444447888888...56688888***************.*****************85444443 PP

>> Rhodanese  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   5.6e-11     5e-07      13     104 ..     388     494 ..     376     497 .. 0.83

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 5.6e-11
   Rhodanese  13 kva.....llDvRppeeYekghIpgAvnvskdtlsrakkseapllelpeellel...........gidnkktvvvycdgggraaaaaallkklGyknvs 95 
                  +      +lD R++ +++ +h+pgA++ +  +l+ +++++ ++ e+ e + ++           +    k+v ++c +g+ ++ a+ +l++ G     
  KHJ31434.1 388 TISdtgyqILDLRTAKDFNIWHLPGAISKPLVSLTAETRNPFFDTETMEVIWSElmimfsshtakNMAGSKKVALICYDGDTSRVATSILRARG-VAAV 485
                 43345555*********************8888888888888888888888888888899998888888*************888899***999.899* PP

   Rhodanese  96 vldGGfkaw 104
                 +l GG+++ 
  KHJ31434.1 486 NLMGGMNGL 494
                 ******986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 3840.20
//
Query:       KHJ31435.1  [L=183]
Description: putative membrane-associated progesterone receptor component 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.5e-13   48.3   0.0    1.1e-12   47.8   0.0    1.2  1  Cyt-b5      Cytochrome b5-like Heme/Steroid binding domain
  ------ inclusion threshold ------
      0.041   13.8   0.1       0.22   11.5   0.4    1.9  2  TNFR_16_TM  Tumor necrosis factor receptor member 16 trans-me


Domain annotation for each model (and alignments):
>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.0   1.3e-16   1.1e-12       4      72 ..      68     164 ..      65     166 .. 0.74

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 1.3e-16
                 HHTTTECTT..EEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHH..............................HHHHHGGEE CS
      Cyt-b5   4 elskhngkn..dlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekda..............................ekllkkylv 70 
                 +l ++ng++  ++++++rgkV+Dvs + +++ G++++++++aG+Da++ +++ +++ + +                              ek+   ++v
  KHJ31435.1  68 TLLQYNGQKdmPVYLSVRGKVFDVSLGRNFY-GPGGPYENFAGRDASRGLAKGSFEAAMLtqdlngpldtlsdlttdeldslkdwegrfhEKY---LVV 162
                 68899966668********************.********************98544433555566666666666666666666664444444...566 PP

                 EE CS
      Cyt-b5  71 Gk 72 
                 G+
  KHJ31435.1 163 GR 164
                 65 PP

>> TNFR_16_TM  Tumor necrosis factor receptor member 16 trans-membrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.4   2.4e-05      0.22      16      30 ..      30      44 ..      28      46 .. 0.88
   2 ?   -1.3   0.0      0.24   2.2e+03       7      13 ..      78      84 ..      75      88 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.4e-05
  TNFR_16_TM 16 aVvvgLlaYvifKrw 30
                a+++ Ll+Yv++K  
  KHJ31435.1 30 AILLALLIYVFYKQF 44
                89***********75 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.24
  TNFR_16_TM  7 IPiYcSI 13
                +P+Y S+
  KHJ31435.1 78 MPVYLSV 84
                59**997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1471.56
//
Query:       KHJ31436.1  [L=177]
Description: hypothetical protein EV44_g3112 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 1272.81
//
Query:       KHJ31437.1  [L=417]
Description: putative chaperone j-domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.2e-25   88.0   3.2      5e-25   87.4   3.2    1.3  1  DnaJ             DnaJ domain
    2.5e-24   86.0   0.0    4.3e-24   85.3   0.0    1.4  1  DnaJ_C           DnaJ C terminal domain
    1.4e-13   51.0  14.7    2.4e-13   50.2  14.7    1.4  1  DnaJ_CXXCXGXG    DnaJ central domain
    2.7e-05   24.1   6.8      0.026   14.5   0.2    2.4  2  Anti-TRAP        Tryptophan RNA-binding attenuator protein in
     0.0033   17.4   5.7       0.74    9.8   0.3    2.3  2  HypA             Hydrogenase/urease nickel incorporation, met
  ------ inclusion threshold ------
        1.9    8.9   6.3         13    6.2   0.9    2.9  3  Lar_restr_allev  Restriction alleviation protein Lar
          2    8.0   7.1         12    5.5   0.3    2.3  2  TackOD1          Thaumarchaeal output domain 1


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.4   3.2     2e-28     5e-25       1      63 []      22      84 ..      22      84 .. 0.99

  Alignments for each domain:
  == domain 1  score: 87.4 bits;  conditional E-value: 2e-28
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63
                dyY++Lgv++das +eIk+aYr+l++kyHPDknp+d+ea++kF +++e ye Lsd+e R++YD
  KHJ31437.1 22 DYYKLLGVTRDASIKEIKRAYRQLSKKYHPDKNPGDNEAKKKFAKVAEVYEALSDQEMRRIYD 84
                8*************************************************************9 PP

>> DnaJ_C  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.3   0.0   1.7e-27   4.3e-24       1     148 []     132     372 ..     132     372 .. 0.89

  Alignments for each domain:
  == domain 1  score: 85.3 bits;  conditional E-value: 1.7e-27
                 EEEEEEE-HHHHHH-.EEE.EEEE.........................................................................TE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx..................................................................xxxxxx RF
      DnaJ_C   1 ieveleisleelykGktkkikikrnvi..................................................................kkekkt 33 
                 +ev++ + l+++y+G  +++ki++++i                                                                  +++ +t
  KHJ31437.1 132 LEVRIGVALKDFYNGHITEFKIEKQQIcdecdgsgsadgkvdicqacgghgiqikkhqlapgiyqqiqvscdvcrgrgksiknkcpvcngnkvVRKVNT 230
                 589999*************************************************************************************96555559 PP

                 EEEEE-TT--TT-EEEETT-SSSS...S---EEEEEE............E---SS-EEETTEEEEEEEEEHHHHHHT.EEEEEE-SS-EEEE......E CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx......x RF
      DnaJ_C  34 levkipaGikdgqkirlegeGdeeg.gepGDlivtik............vkphpvFkrkgndlyveveislaeallG.gklevptldgkvkl......k 112
                 + + i++G ++g+ i +e+ +de++ +e+GDl vt+             + +  +F+rkg++ly +  +sl+ea+lG  + ++  ldg+v         
  KHJ31437.1 231 FPLIIEKGAPNGKVIHYENDADESPdYESGDLRVTLFekepsleednelKVDGTFFRRKGDNLYWKEVLSLREAWLGsWTRNITHLDGHVVAlgrprgV 329
                 ************************************8666666544444334447*********7778*********7333665666666555766645 PP

                 E--TT-EEEETT-S-EET..........TEE--EEEEEEEE-- CS
                 xxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxx RF
      DnaJ_C 113 itqpgevlrikgkGmpklk.......kpgkrGdlyvevkvefP 148
                 ++qpg+v  + g+Gmpk++       +++ +Gdl+ve++v +P
  KHJ31437.1 330 VVQPGQVEHVTGQGMPKWHengdsvyHSTDYGDLIVEYTVILP 372
                 7***************************************998 PP

>> DnaJ_CXXCXGXG  DnaJ central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2  14.7   9.5e-17   2.4e-13       1      67 []     159     223 ..     159     223 .. 0.92

  Alignments for each domain:
  == domain 1  score: 50.2 bits;  conditional E-value: 9.5e-17
  DnaJ_CXXCXGXG   1 CkkCkGsgakkgkkktCktCkGsG.vvreeqktlgp.fvqqsqstCpeCeGtGkvikekdkCkkCkGkg 67 
                    C++C+Gsg+++gk++ C++C+G+G +++++q  l+p ++qq+q +C+ C+G+Gk i  k+kC+ C+G++
     KHJ31437.1 159 CDECDGSGSADGKVDICQACGGHGiQIKKHQ--LAPgIYQQIQVSCDVCRGRGKSI--KNKCPVCNGNK 223
                    *********99*************6667776..88989******************..778******86 PP

>> Anti-TRAP  Tryptophan RNA-binding attenuator protein inhibitory protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   1.8   7.3e-05      0.19      11      41 ..     157     183 ..     152     188 .. 0.86
   2 !   14.5   0.2     1e-05     0.026       9      42 ..     198     225 ..     195     233 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 7.3e-05
                 EE-TTTTTTSEETTE......E-TTTTTSSE CS
   Anti-TRAP  11 tkCdaCngsGkiepeeprasleCPkCsGkgl 41 
                 + Cd+C+gsG ++++       C +C+G+g+
  KHJ31437.1 157 QICDECDGSGSADGK----VDICQACGGHGI 183
                 56************9....446*******97 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 1e-05
                 CEEE-TTTTTTSEETTE......E-TTTTTSSEE CS
   Anti-TRAP   9 LEtkCdaCngsGkiepeeprasleCPkCsGkgli 42 
                 + + Cd C g Gk   +      +CP C+G++++
  KHJ31437.1 198 IQVSCDVCRGRGKSIKN------KCPVCNGNKVV 225
                 5689*********9999......9********97 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.3   0.00029      0.74      67     101 ..     153     187 ..     140     191 .. 0.81
   2 !    9.7   0.9   0.00033      0.85      67      97 ..     196     224 ..     194     232 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00029
                 E--EEEETTTS-EEECHHHHHS-TTTSSS-EEEEE CS
        HypA  67 vpvkvrCreCgkefeleekalrCpkCgsadveivs 101
                 ++ +  C+eC+ +++ + k   C++Cg+++++i++
  KHJ31437.1 153 IEKQQICDECDGSGSADGKVDICQACGGHGIQIKK 187
                 455678*****99998877446********99975 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00033
                 E--EEEETTTS-EEECHHHHHS-TTTSSS-E CS
        HypA  67 vpvkvrCreCgkefeleekalrCpkCgsadv 97 
                 ++++v C++C+ ++++ ++  +Cp C++++v
  KHJ31437.1 196 QQIQVSCDVCRGRGKSIKN--KCPVCNGNKV 224
                 57899*********97755..8****99876 PP

>> Lar_restr_allev  Restriction alleviation protein Lar
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.6   6.6e+03      29      36 ..     157     164 ..     117     169 .. 0.77
   2 ?    6.2   0.9    0.0052        13       6      36 ..     175     207 ..     170     215 .. 0.82
   3 ?    4.8   0.2     0.015        38       5      18 ..     215     228 ..     210     233 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.6
  Lar_restr_allev  29 vyCadCga 36 
                       +C++C  
       KHJ31437.1 157 QICDECDG 164
                      45666654 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0052
  Lar_restr_allev   6 CPfCggravlersqrvvaeigq..cvyCadCga 36 
                      C  Cgg ++ ++ ++ + +i q  +v+C+ C  
       KHJ31437.1 175 CQACGGHGIQIKKHQLAPGIYQqiQVSCDVCRG 207
                      999*****9988888888888889999988986 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.015
  Lar_restr_allev   5 pCPfCggravlers 18 
                       CP C+g +v+ + 
       KHJ31437.1 215 KCPVCNGNKVVRKV 228
                      7********99876 PP

>> TackOD1  Thaumarchaeal output domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.3    0.0047        12      63     100 ..     146     185 ..     137     195 .. 0.72
   2 ?    5.4   1.8    0.0051        13      73      99 ..     199     225 ..     186     230 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0047
     TackOD1  63 glleeelvdrirlCpsCksghln..vrevCpkCkSidiee 100
                 g ++e  ++++++C++C+++       ++C  C+   i+ 
  KHJ31437.1 146 GHITEFKIEKQQICDECDGSGSAdgKVDICQACGGHGIQI 185
                 6677788999999999987654322578999997655544 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0051
     TackOD1  73 irlCpsCksghlnvrevCpkCkSidie 99 
                 ++ C+ C++   ++++ Cp C+  ++ 
  KHJ31437.1 199 QVSCDVCRGRGKSIKNKCPVCNGNKVV 225
                 568******************987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       946  (0.0527637); expected 358.6 (0.02)
Passed bias filter:                      754  (0.0420548); expected 358.6 (0.02)
Passed Vit filter:                        98  (0.005466); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 3025.52
//
Query:       KHJ31438.1  [L=996]
Description: putative pre-mrna-splicing factor atp-dependent rna helicase prp16 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.6e-22   77.5   0.0    1.8e-21   76.3   0.0    1.7  1  OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fol
    2.4e-19   69.6   0.1    2.4e-19   69.6   0.1    3.2  2  HA2          Helicase associated domain (HA2)
    1.3e-14   54.4   0.0    4.8e-14   52.6   0.0    2.0  1  Helicase_C   Helicase conserved C-terminal domain
      6e-05   23.3   0.0    0.00021   21.5   0.0    1.9  1  AAA_22       AAA domain
    8.9e-05   22.3   0.0    0.00023   21.0   0.0    1.7  1  DEAD         DEAD/DEAH box helicase
    0.00062   19.5   0.0     0.0018   18.1   0.0    1.8  1  AAA_30       AAA domain
      0.003   16.7   0.0     0.0074   15.4   0.0    1.6  1  T2SSE        Type II/IV secretion system protein
  ------ inclusion threshold ------
      0.018   15.4   0.1      0.042   14.2   0.1    1.6  1  AAA_19       AAA domain
      0.024   14.3   0.0      0.051   13.2   0.0    1.6  1  SRP54        SRP54-type protein, GTPase domain
      0.092   13.3   0.1      0.092   13.3   0.1    2.9  3  ABC_tran     ABC transporter
       0.12   11.9   0.1        0.3   10.5   0.0    1.7  2  PhoH         PhoH-like protein


Domain annotation for each model (and alignments):
>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.3   0.0   1.1e-24   1.8e-21       1      82 [.     901     980 ..     901     981 .. 0.94

  Alignments for each domain:
  == domain 1  score: 76.3 bits;  conditional E-value: 1.1e-24
                  HHHHHHHHHTTCEEEEEETTCCEEETTTCEEEEE-TTSTTTTT...TSSSEEEEEEEEESSSEEEEEEEEE-HHHHHHHSTT CS
  OB_NTP_bind   1 lraillaGlypqiarkdpskkdyktartktrvfihpsSvlaknekekepewvvytelvettklylrdltaidpawLllfagq 82 
                  ++++++aG++p+ a+ ++ + +y+t++++t v+ihpsSvl +  ++ + + vvy+elv+t+k y+r + +i p+wL ++a++
   KHJ31438.1 901 IQKAITAGFFPNAAQLQRGGDSYRTVKNNTTVYIHPSSVLMD--SNPPIKMVVYYELVQTSKEYMRSCLPIKPEWLHEVAPH 980
                  799***********88888888*******************8..668889***************************99987 PP

>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.6       7.1   1.2e+04      78      91 ..     275     291 ..     244     306 .. 0.46
   2 !   69.6   0.1   1.5e-22   2.4e-19       1     108 []     752     842 ..     752     843 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 7.1
         HA2  78 e...eekakkkrkeeek 91 
                 e   +e++++++++ +k
  KHJ31438.1 275 EkfiTEHEEWENEQTAK 291
                 02222222222222222 PP

  == domain 2  score: 69.6 bits;  conditional E-value: 1.5e-22
         HA2   1 AlelLvalgALdeegnlTelGrkmaelPlsprlakmLlaaaeleegcldevitivAalsv.eeifleeneeekeeeeeeeekakkkrkeeekarrklah 98 
                 Al++L+al+AL+++g+ T+lGr+mae+P +p+lak +laa +l  gc++ev++iv++ls  + +f ++++++   +      ++++r+ +++       
  KHJ31438.1 752 ALNQLFALQALNHKGEMTKLGRQMAEFPTDPMLAKAILAADKL--GCVEEVLSIVSMLSEaSALFFRPKDKKIHAD------SARARFTIKE------- 835
                 899*************************************666..**************63677877776543322......2233333333....... PP

         HA2  99 kdaegDhltl 108
                     gDh+tl
  KHJ31438.1 836 ---GGDHFTL 842
                 ...4888886 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.0     3e-17   4.8e-14      11     111 .]     563     690 ..     551     690 .. 0.85

  Alignments for each domain:
  == domain 1  score: 52.6 bits;  conditional E-value: 3e-17
                 HHTTTTSEEEEEESSHHHHHH.....HHHHHHHT.....TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSH.. CS
  Helicase_C  11 kleeeggkilifvntidrlek.....vklllekk.....gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnv.. 97 
                 ++++ +g+ilif++ +d++e      +++ ++       ++ +++++++lp++ + +i+e   +g ++v++at++ae++++i+++ +Vi+ ++ ++   
  KHJ31438.1 563 HTTQGKGDILIFLTGQDEIEAaeqniTDICRK-LgsrvpELVICPIYANLPSELQSKIFEPTPAGARKVVLATNIAETSLTIDGIVYVIDPGFVKENiy 660
                 678899***********887666676333322.2355789*****************************************************955336 PP

                 ................HHHHHHHTTSSSTT CS
  Helicase_C  98 ................tsyiqriGRtgRag 111
                                 +s++qr+GR+gR+g
  KHJ31438.1 661 npatgmsklvavpcsrASANQRSGRAGRVG 690
                 679999999*******************97 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   1.3e-07   0.00021       6     107 ..     376     490 ..     373     512 .. 0.74

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 1.3e-07
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst..sskdllrellralglelka.........erlsseellealeqalrarav.. 91 
                 +ilv++Ge+G+GKTt l ++l+++          ++ ++v ++++      +++ +++ ++g++  +            s + +l+++++ +  r    
  KHJ31438.1 376 QILVIVGETGSGKTTQLPQYLHEYG-------YTKGGLKVGCTQPRrvAAMSVAARVADEMGVKIGNevgysirfeDSTSDKTVLKYMTDGMLLREFmt 467
                 79*********************95.......4788889999999888888999999999999888899999999844444444455555444333347 PP

      AAA_22  92 ......ielliiDEaqhlr.see 107
                        ++l+iDEa+  + + +
  KHJ31438.1 468 epdlggYAALMIDEAHERTvHTD 490
                 88899999*******98533333 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   1.4e-07   0.00023       7     170 ..     368     516 ..     362     522 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 1.4e-07
                 HHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.STSEEEEEETTSSHHHHHHHHHTTCSEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   7 aiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkky.idlrvlliiggvaardqlskldngvdivvgt 104
                  ++++ + + +++ +eTGsGKT+     + +  y   +k g k+ +  P r  a  ++ ++   +   i+ +v     g + r + s+   ++ + ++t
  KHJ31438.1 368 FLEALAEYQILVIVGETGSGKTTQLPQYLHEYGY---TKGGLKVGCTQPRRVAAMSVAARVADEMGVkIGNEV-----GYSIRFEDSTS-DKTVLKYMT 457
                 55566666778899********997777776666...6*********************99887773255333.....34555555555.45667899* PP

                 HHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 105 pgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp 170
                  g+l++ + t+  +l     l +DEa++       d + ++++ l++   + k    +++ SAT++
  KHJ31438.1 458 DGMLLREFMTEP-DLGGYAALMIDEAHERTVH--TDILLALVKDLARERPEMK----LLISSATMN 516
                 ******775555.7**************9997..9999999****66655555....********8 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   1.1e-06    0.0018      15     111 ..     373     498 ..     365     510 .. 0.66

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 1.1e-06
      AAA_30  15 tsgdrvavltGpAGtGKttalkal.reaweaag.........grviglAptgkaAkvLaeelg....i.....eastiakllkrlk..........gra 84 
                 ++  ++ v++G  G+GKtt l ++  e   ++g         +rv++++  +++A++++ ++g          ++ + + +lk              + 
  KHJ31438.1 373 AEY-QILVIVGETGSGKTTQLPQYlHEYGYTKGglkvgctqpRRVAAMSVAARVADEMGVKIGnevgYsirfeDSTSDKTVLKY-MtdgmllrefmTEP 469
                 333.499**************9995444334446*************************6555332213333322222223322.14677777777556 PP

      AAA_30  85 rlepgtllivDEag..mvdtkqlaallka 111
                 +l     l++DEa    v t+ l al+k 
  KHJ31438.1 470 DLGGYAALMIDEAHerTVHTDILLALVKD 498
                 77888999999996223455555555555 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   4.6e-06    0.0074     101     152 ..     348     398 ..     332     404 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4.6e-06
       T2SSE 101 keltlddlgaeealkekiaevlrkavrerglilvsGgTgsGKttllyallke 152
                 k+l++++ +++    +  +++l++  +e++++++ G TgsGKtt l   l+e
  KHJ31438.1 348 KALSIEETRKNLPIYAYRDQFLEAL-AEYQILVIVGETGSGKTTQLPQYLHE 398
                 4555555555555556667788777.999999*************9888776 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   2.6e-05     0.042       8     125 ..     373     499 ..     367     510 .. 0.63

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.6e-05
      AAA_19   8 lkekvllvtaGpGtGKTrvlkhivallvelggvkp......eeillvaftgrAakelrerlaalgae........atTiHrlalldfddlltealelle 92 
                 ++ ++l++++  G+GKT+ l + ++++  ++g         +++++++++ r a+e+  ++   g e         +T  +  +l++ ++      ll+
  KHJ31438.1 373 AEYQILVIVGETGSGKTTQLPQYLHEYGYTKGGLKvgctqpRRVAAMSVAARVADEMGVKI---GNEvgysirfeDSTSDKT-VLKYMTDG----MLLR 463
                 566789999*************999998776542224444488888888888888887777...444555555554444444.23333333....2444 PP

      AAA_19  93 eaeeekklqeee.llivDEfqdvd...elqyrLlkal 125
                 e  +e +l  ++ +l++DE+ + +   +   +L+k l
  KHJ31438.1 464 EFMTEPDL-GGYaALMIDEAHERTvhtDILLALVKDL 499
                 55667788.66669****9987541133444555555 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   3.1e-05     0.051       3      61 ..     377     435 ..     375     527 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.1e-05
                 EEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEEESTSSTTHHHHHHHHHHHTTEEEEE CS
       SRP54   3 villvGlqGaGKTttlaKLaallkkegkkvllvaaDtfRaaAveQLktlaeklgvpvik 61 
                 ++++vG +G+GKTt l +  + +   +  + + ++   R+aA+   + +a+++gv++ +
  KHJ31438.1 377 ILVIVGETGSGKTTQLPQYLHEYGYTKGGLKVGCTQPRRVAAMSVAARVADEMGVKIGN 435
                 789********************999999999************999999999999654 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   1.4       3.9   6.3e+03      55      96 ..      89     132 ..      65     224 .. 0.59
   2 ?   -1.2   0.1       1.6   2.7e+03      54      63 ..     299     308 ..     242     372 .. 0.51
   3 ?   13.3   0.1   5.7e-05     0.092       9      44 ..     373     408 ..     366     433 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.9
                 HHCCHCEEEE-SS...--S-TTSBHHHH.HHHTCHHHHHHHSTTGG CS
                 xxxxxxxxxxxxx...xxxxxxxxxxxx.xxxxxxxxxxxxxxxxx RF
    ABC_tran  55 eslrkeigvlpqe...pqlfpeltvren.esdeeiekalsklglke 96 
                 es+ k++++ +q+   ++l++e   re+  +++e e+++++l  k+
  KHJ31438.1  89 ESAPKRVKTAHQDdseEELDEEE--RERiRDQKEKEAFAKRLASKD 132
                 45555555555553221222211..222422222333333333332 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.6
                 HHHCCHCEEE CS
                 xxxxxxxxxx RF
    ABC_tran  54 leslrkeigv 63 
                 le+++++  +
  KHJ31438.1 299 LERTDNNYDY 308
                 2222222222 PP

  == domain 3  score: 13.3 bits;  conditional E-value: 5.7e-05
                 ETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   9 kegekvaivGenGaGKStLlkllagllkpteGeill 44 
                  e ++++ivGe+G+GK+t l   ++++  t+G +++
  KHJ31438.1 373 AEYQILVIVGETGSGKTTQLPQYLHEYGYTKGGLKV 408
                 66799*************999999999888887765 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       4.9     8e+03      43      64 ..     180     202 ..     179     212 .. 0.77
   2 ?   10.5   0.0   0.00019       0.3      10      33 ..     366     389 ..     360     392 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 4.9
                 HHHTTS-SEEEEEE-S--T.T-- CS
        PhoH  43 alkkkkvkriiltrpavea.gee 64 
                 +lkk++ +r+ l+r +v+   ee
  KHJ31438.1 180 YLKKREAERLALLRKQVDEeTEE 202
                 68899999999999999642454 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00019
                 HHHHHHHHH-SEEEEE--TTSSTT CS
        PhoH  10 keylealkkndivfaiGpaGtGKt 33 
                 +++leal +++i++++G++G+GKt
  KHJ31438.1 366 DQFLEALAEYQILVIVGETGSGKT 389
                 6899*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (996 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1539  (0.0858386); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.88u 0.31s 00:00:01.19 Elapsed: 00:00:00.46
# Mc/sec: 6461.05
//
Query:       KHJ31439.1  [L=120]
Description: hypothetical protein EV44_g3704 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.14   12.3   0.0       0.21   11.7   0.0    1.3  1  DUF2200   Uncharacterized protein conserved in bacteria (DUF2


Domain annotation for each model (and alignments):
>> DUF2200  Uncharacterized protein conserved in bacteria (DUF2200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.2e-05      0.21      31      80 ..      63     113 ..      54     119 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.2e-05
     DUF2200  31 vieWltgydeeelq.eliekkvtfeeffeeapklnpnaslikGviCgvrve 80 
                 ++ + t ++++  q +   ++  +++ff++ap+  p++ ++kG+i   r  
  KHJ31439.1  63 ILPFRTPFHHRGSQsSSFLHHFPLNTFFHQAPHDWPREYKVKGSILSQRTS 113
                 5555566655544314456778899********************988865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       340  (0.0189637); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 889.00
//
Query:       KHJ31440.1  [L=257]
Description: hypothetical protein EV44_g3242 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.039   13.3   1.0      0.056   12.8   1.0    1.3  1  Glycoprotein_G  Pneumovirus attachment glycoprotein G


Domain annotation for each model (and alignments):
>> Glycoprotein_G  Pneumovirus attachment glycoprotein G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.0   3.1e-06     0.056     132     232 ..     123     220 ..      90     238 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.1e-06
                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--HHHHTT-HHHHHH----XXXXXXXXXXXXXXXXXXX.XXXXXXXXX........XXXXXXXXX CS
  Glycoprotein_G 132 aatrkPsikprksnPpekpkddyhFevlnfvPCsiCennsaClslCktipekkpkkkptikpkkkPkl.kttkkdtktlakklkkettikrtske 225
                     + +r  + +p+++  p+++++ +  +v n+  C +C+ ++ C+ +C+ + e++ + +  +++k++    k  k+ +    k++ + +  +rt+ +
      KHJ31440.1 123 QRQRDLPASPEDRSWPKENNQPSRNRVRNY-RCYVCKSEEHCVDICQYK-ERAYEWAFQLRLKDEKIFdKSSKHSSSR--KETDRVANNRRTHLN 213
                     444555666777777777777888899999.6**************975.6777888877777654430333433332..333333444444444 PP

                     XXXXXXX CS
  Glycoprotein_G 226 tkkttkt 232
                      +k+ kt
      KHJ31440.1 214 RQKEKKT 220
                     4444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1714  (0.0955993); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1948.82
//
Query:       KHJ31441.1  [L=263]
Description: hypothetical protein EV44_g3563 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.011   13.3   2.9      0.013   13.0   2.9    1.0  1  DUF3584        Protein of unknown function (DUF3584)
      0.013   15.4   3.3        1.8    8.4   2.3    2.6  2  CdvA           CdvA-like coiled-coil domain
      0.017   16.0   1.8      0.029   15.3   1.8    1.5  1  CDC37_N        Cdc37 N terminal kinase binding
      0.019   14.9   2.3        2.4    8.2   0.5    2.4  2  Sugarporin_N   Maltoporin periplasmic N-terminal extension
      0.046   13.1   1.8      0.072   12.5   1.8    1.3  1  FliD_C         Flagellar hook-associated protein 2 C-terminus
       0.12   11.8   2.5       0.18   11.2   2.5    1.2  1  MIF4G_like_2   MIF4G like
       0.21   10.3   2.6       0.28    9.9   2.6    1.1  1  BshC           Bacillithiol biosynthesis BshC
       0.21   10.1   2.5       0.25    9.9   2.5    1.1  1  FapA           Flagellar Assembly Protein A
       0.55   10.5   3.6        3.7    7.8   0.3    2.3  2  XhlA           Haemolysin XhlA
       0.58    9.8   5.7          1    9.1   5.7    1.3  1  SKIP_SNW       SKIP/SNW domain
       0.58   10.4   6.1       0.94    9.7   6.1    1.2  1  Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
       0.87    9.7   6.3         11    6.2   1.1    2.8  2  DMPK_coil      DMPK coiled coil domain like
          1    9.6   3.9        1.4    9.1   2.0    1.8  1  Fib_alpha      Fibrinogen alpha/beta chain family
        1.3    9.5   6.4        2.1    8.8   6.4    1.3  1  CENP-H         Centromere protein H (CENP-H)
        2.1    8.7   5.6        1.5    9.1   2.4    2.2  2  VPS11_C        Vacuolar protein sorting protein 11 C terminal
        2.1    8.9   6.3          4    8.0   6.3    1.5  1  DUF2408        Protein of unknown function (DUF2408)


Domain annotation for each model (and alignments):
>> DUF3584  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   2.9   1.2e-05     0.013     819     902 ..       8      92 ..       2     115 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.2e-05
     DUF3584 819 alkeqveelesaaeeleqeltrliedtklerkklekerkalekqldqldenlr.klrdllsklaelkldadaeqaegelaerlaa 902
                 +l++  +++ +++++le +l +l+++tk+  k++++  ++lek+ld ++++   ++   +++la l+ ++d+e+ + ++ +  ++
  KHJ31441.1   8 ELESIINNTIASQRQLEARLDNLEKNTKAADKRINSRFESLEKKLDDAEKKSDdRFSEIMEALASLQPNKDKEKGKEKVTFQTQQ 92 
                 5667778888899999999999999999999999999999999999999988889999999999999999999888777776665 PP

>> CdvA  CdvA-like coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   2.3    0.0016       1.8      24      61 ..      20      57 ..      14      59 .. 0.92
   2 ?    5.0   0.0     0.018        20      64      90 ..     230     256 ..     223     258 .. 0.89

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0016
        CdvA 24 kekleealkklkekakelkeklkkrlkeledqikslek 61
                +++le  l+ l+++ k+  +++++r ++le++++  ek
  KHJ31441.1 20 QRQLEARLDNLEKNTKAADKRINSRFESLEKKLDDAEK 57
                689****************************9988775 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.018
        CdvA  64 anlkisyasGEidEeaYksaieairel 90 
                 ++ k++ya +++ E+ Yk +  +i+ +
  KHJ31441.1 230 IDCKLKYAGNDVLEKLYKMQVIMIQAM 256
                 6899****************9999876 PP

>> CDC37_N  Cdc37 N terminal kinase binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   1.8   2.6e-05     0.029      37     106 ..      17      85 ..       6     123 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.6e-05
     CDC37_N  37 ihekreqrkaeikklklereindkllkridkllealkekeveeeevvfkalnesleekkekedkpkaeke 106
                 i  +r+ + +  +  k +++ ++++++r+++l ++l++ e+++ +  f++++e+l++ ++++dk+k +++
  KHJ31441.1  17 IASQRQLEARLDNLEKNTKAADKRINSRFESLEKKLDDAEKKS-DDRFSEIMEALASLQPNKDKEKGKEK 85 
                 555555544444444556778899*************999999.789999***99999999999988732 PP

>> Sugarporin_N  Maltoporin periplasmic N-terminal extension
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.5    0.0021       2.4      27      45 ..      22      40 ..       9      43 .. 0.67
   2 ?    6.9   0.1    0.0054       6.1      29      44 ..      42      57 ..      34      61 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0021
  Sugarporin_N 27 tiEaRLaaLEkrLqeAeqr 45
                   +EaRL  LEk  ++A  r
    KHJ31441.1 22 QLEARLDNLEKNTKAADKR 40
                  4677777777776666665 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0054
  Sugarporin_N 29 EaRLaaLEkrLqeAeq 44
                    R++ LEk L +Ae 
    KHJ31441.1 42 NSRFESLEKKLDDAEK 57
                  57************97 PP

>> FliD_C  Flagellar hook-associated protein 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.8   6.4e-05     0.072     177     238 ..       9      73 ..       4      75 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 6.4e-05
                 HHHHHHHHHSTT.SHHH....HHHHHXXXXHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH CS
      FliD_C 177 lenllksyvkssngtlq....tasknltkqikdldkkiedldkrletleerlkkqfaalekavskl 238
                 le++++++++s+  +l+    +++kn +  +k+++++ e+l+k+l++ e++   +f+++ +a+ +l
  KHJ31441.1   9 LESIINNTIASQ-RQLEarldNLEKNTKAADKRINSRFESLEKKLDDAEKKSDDRFSEIMEALASL 73 
                 567777777555.444412227777777778889999999**************999887777666 PP

>> MIF4G_like_2  MIF4G like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   2.5   0.00016      0.18     153     240 ..      13      90 ..       5     117 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00016
  MIF4G_like_2 153 lkrtlskvnkrvkkvrqeleelkkkeeeekakeeedkeeeeeleraeekleaaqkeqkelflivferlveilsesleeletsgseent 240
                   +++t+  +     +++ +l++l+k+++++      dk  +++ e++e+kl++a+k++ + f+ ++e+l+++  +  +e ++++ +++t
    KHJ31441.1  13 INNTIASQ----RQLEARLDNLEKNTKAA------DKRINSRFESLEKKLDDAEKKSDDRFSEIMEALASLQPNKDKEKGKEKVTFQT 90 
                   34444333....35788998888886665......6778899***************************9998887777777766666 PP

>> BshC  Bacillithiol biosynthesis BshC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   2.6   0.00025      0.28     451     502 ..      28      78 ..       2      89 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00025
                 GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSGGGS CS
        BshC 451 ktleklveanekkilkqlekLekkllkaekrkheeelrqlekikneLfPngs 502
                 ++lek ++a  k+i++ +e+Lekkl +aek k ++  +++ ++  +L Pn+ 
  KHJ31441.1  28 DNLEKNTKAADKRINSRFESLEKKLDDAEK-KSDDRFSEIMEALASLQPNKD 78 
                 468888999999999999999999998875.667788888888899999875 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   2.5   0.00023      0.25     322     410 ..       3      90 ..       1     138 [. 0.60

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00023
        FapA 322 tkteiev.gldepelkeklkeleeeleeleeeleklkkkikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeeles 410
                  kt +e+ ++  +++++++++le +l +le++++  +k+i++  + + ek+l+   k++ ++  e +e+l +   + ++e+ + k  +++
  KHJ31441.1   3 GKTNLELeSII-NNTIASQRQLEARLDNLEKNTKAADKRINSRFE-SLEKKLDDAEKKSDDRFSEIMEALASLQPNKDKEKGKEKVTFQT 90 
                 57777775555.777777788888888888888888888776666.44444554444444444444444444444444444444444444 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.2      0.09     1e+02      36      50 ..      22      36 ..       8      38 .. 0.72
   2 ?    7.8   0.3    0.0033       3.7       7      37 ..      39      69 ..      39      74 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.09
        XhlA 36 nleedlkklesnqkW 50
                +le +l++le+n+k 
  KHJ31441.1 22 QLEARLDNLEKNTKA 36
                566677777777764 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0033
        XhlA  7 erietkldnleervdkleekaaeaeekiknl 37
                +ri+++ ++le+++d+ e+k++   ++i+++
  KHJ31441.1 39 KRINSRFESLEKKLDDAEKKSDDRFSEIMEA 69
                599******************9999998875 PP

>> SKIP_SNW  SKIP/SNW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   5.7   0.00089         1      89     147 ..      23      83 ..      15      92 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00089
    SKIP_SNW  89 LdkRlaadgrglq..eveindkFaklseaLeeAerkareevklraelkkklaekekeekee 147
                 L+ Rl   +++++  +++in++F++l + L++Ae+k+ ++ ++ +e+  +l+ ++ +ek +
  KHJ31441.1  23 LEARLDNLEKNTKaaDKRINSRFESLEKKLDDAEKKSDDRFSEIMEALASLQPNKDKEKGK 83 
                 77888777766663466*********************99998888887777655555533 PP

>> Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   6.1   0.00084      0.94      58     137 ..       5      81 ..       2      94 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00084
  Jnk-SapK_ap_N  58 eleqLeteyerekelrkraeeeleeiedqweeerkelqekveqleeenrelelkaknaadqlsrleekeaelkkeysklh 137
                    ++ +Le+  ++  + +++ e +l ++e++ +   k +++++e+le++ +  e   k+++d+ s++ e  a+l+ +++k +
     KHJ31441.1   5 TNLELESIINNTIASQRQLEARLDNLEKNTKAADKRINSRFESLEKKLDDAE---KKSDDRFSEIMEALASLQPNKDKEK 81 
                    56788888999999************************************99...5555555555555444443333333 PP

>> DMPK_coil  DMPK coiled coil domain like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   1.1    0.0099        11      23      55 ..       2      34 ..       1      40 [. 0.91
   2 ?    5.4   0.4     0.018        20      30      48 ..      48      66 ..      39      75 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0099
   DMPK_coil 23 vkaanlafeskLkeaEkknreLeeeleqLkkem 55
                v ++nl+ es + ++ +  r+Le+ l++L k++
  KHJ31441.1  2 VGKTNLELESIINNTIASQRQLEARLDNLEKNT 34
                5679**************************987 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.018
   DMPK_coil 30 feskLkeaEkknreLeeel 48
                 e kL +aEkk+ +  +e+
  KHJ31441.1 48 LEKKLDDAEKKSDDRFSEI 66
                689********98866655 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   2.0    0.0013       1.4      28      83 ..      36      91 ..      28      93 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0013
                CCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha 28 kyekdvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikkss 83
                  +k ++ + e+le++l+++++++ + ++ + e   sl++++ ++k++++v+ + +
  KHJ31441.1 36 AADKRINSRFESLEKKLDDAEKKSDDRFSEIMEALASLQPNKDKEKGKEKVTFQTQ 91
                56788899999****************99999999999999999999998887765 PP

>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   6.4    0.0019       2.1       8      84 ..       6      86 ..       2      93 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0019
      CENP-H  8 rdelssellklsqelrelqeeltevekenlrlkrknrelaaellelakekesek....eklkeelekleaelkksrqrwrv 84
                + el s + ++ ++ r+l+++l+++ek+++++ ++ ++ +++l+++  ++e+++    ++ +e+l++l+ + +k++ + +v
  KHJ31441.1  6 NLELESIINNTIASQRQLEARLDNLEKNTKAADKRINSRFESLEKKLDDAEKKSddrfSEIMEALASLQPNKDKEKGKEKV 86
                56788889999999*****************************54444444444578877888888888888887766555 PP

>> VPS11_C  Vacuolar protein sorting protein 11 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.87   9.7e+02       4      22 ..      13      31 ..      11      33 .. 0.83
   2 ?    9.1   2.4    0.0013       1.5       6      38 ..      33      69 ..      31      71 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.87
     VPS11_C  4 irelrraQeesadrhdlFk 22
                i++++ +Q+++  r d ++
  KHJ31441.1 13 INNTIASQRQLEARLDNLE 31
                78999*****999888776 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0013
     VPS11_C  6 elrraQeesadrhdlFkaaLee....seDrFkvvady 38
                +++ a +++  r + +++ L++    s+DrF+ +++ 
  KHJ31441.1 33 NTKAADKRINSRFESLEKKLDDaekkSDDRFSEIMEA 69
                7889999******************99*****99986 PP

>> DUF2408  Protein of unknown function (DUF2408)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   6.3    0.0035         4       6      69 ..       7      75 ..       3     142 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0035
     DUF2408  6 pelepiyekLvsirrsLlslaakskaeeakeseevkeelkelkeeLkkieskrde.....egkFkseeg 69
                 ele+i++  +  +r+L + + + +++++++++++++++++l+++L + e+k d+      +  +s + 
  KHJ31441.1  7 LELESIINNTIASQRQLEARLDNLEKNTKAADKRINSRFESLEKKLDDAEKKSDDrfseiMEALASLQP 75
                6899******************9999999**********************999955555444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1733  (0.096659); expected 358.6 (0.02)
Passed bias filter:                      987  (0.0550505); expected 358.6 (0.02)
Passed Vit filter:                       143  (0.0079759); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 1934.80
//
Query:       KHJ31442.1  [L=217]
Description: putative c2h2 transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.2e-07   31.0  11.8    6.7e-07   29.5   0.9    3.0  3  zf-H2C2_2    Zinc-finger double domain
    8.1e-05   22.8   3.4    0.00016   21.9   3.4    1.5  1  zf-Di19      Drought induced 19 protein (Di19), zinc-binding
     0.0048   17.6  21.7     0.0097   16.7   5.9    2.7  3  zf-C2H2_4    C2H2-type zinc finger
     0.0097   16.2   3.3        1.4    9.2   0.8    2.4  2  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
  ------ inclusion threshold ------
      0.059   13.9   7.3      0.059   13.9   7.3    2.5  2  zf-C2H2      Zinc finger, C2H2 type
       0.36   10.0   7.5       0.56    9.3   7.5    1.3  1  Med3         Mediator complex subunit 3 fungal


Domain annotation for each model (and alignments):
>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.8    0.0011       3.4      14      26 .]      93     105 ..      87     105 .. 0.86
   2 !   29.5   0.9   2.2e-10   6.7e-07       1      25 [.     108     132 ..     108     133 .. 0.95
   3 ?   -2.1   0.1       2.2   6.5e+03       2       7 ..     137     142 ..     137     143 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0011
   zf-H2C2_2  14 pyeCplCdkaFkt 26 
                 ++ Cp C k++ +
  KHJ31442.1  93 KFPCPHCTKTYLH 105
                 599*******976 PP

  == domain 2  score: 29.5 bits;  conditional E-value: 2.2e-10
   zf-H2C2_2   1 nLrrHirkHtgekpyeCplCdkaFk 25 
                 +L+rH+  Htg++py C lC+++F+
  KHJ31442.1 108 HLKRHLLRHTGDRPYMCILCRDTFS 132
                 79**********************8 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 2.2
   zf-H2C2_2   2 LrrHir 7  
                 L+rH+ 
  KHJ31442.1 137 LKRHFQ 142
                 899*86 PP

>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   3.4   5.3e-08   0.00016       2      46 ..      93     137 ..      92     148 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 5.3e-08
     zf-Di19   2 sftCPyCgk.eltvkeLveHvedeHrveskevvCPvCaekvtk.dlv 46 
                 +f+CP+C+k  l++k L +H+   H+ + ++++C +C ++ ++ d+ 
  KHJ31442.1  93 KFPCPHCTKtYLHAKHLKRHLLR-HTGD-RPYMCILCRDTFSRsDIL 137
                 69*******78**********98.8876.6799****9986653544 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   5.9   3.2e-06    0.0097       1      23 [.      94     116 ..      94     117 .. 0.97
   2 !   12.6   1.6   6.8e-05       0.2       1      22 [.     122     143 ..     122     145 .. 0.89
   3 ?   -4.0   0.6         6   1.8e+04      18      23 ..     158     163 ..     155     165 .. 0.60

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 3.2e-06
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 f+Cp+C+k++   k+L+rHl++h
  KHJ31442.1  94 FPCPHCTKTYLHAKHLKRHLLRH 116
                 89********************9 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 6.8e-05
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkt 22 
                 + C +C+ +Fs+++ L+rH+++
  KHJ31442.1 122 YMCILCRDTFSRSDILKRHFQK 143
                 78********88888****986 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 6
   zf-C2H2_4  18 rHlkth 23 
                 +H ++h
  KHJ31442.1 158 SHSQAH 163
                 465555 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.8   0.00048       1.4       1      21 [.      93     113 ..      93     114 .. 0.94
   2 !    7.0   0.1    0.0025       7.3       2      21 ..     122     141 ..     121     142 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00048
                  ECBBTTTTBBBSSHHHHHCCT CS
  zf-C2H2_jaz   1 qfYCvlCdKyFksenaldnHl 21 
                  +f C++C K++  ++ l+ Hl
   KHJ31442.1  93 KFPCPHCTKTYLHAKHLKRHL 113
                  688*****************7 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0025
                  CBBTTTTBBBSSHHHHHCCT CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHl 21 
                  + C+lC  +F+ +  l+ H+
   KHJ31442.1 122 YMCILCRDTFSRSDILKRHF 141
                  89**************9997 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   7.3     2e-05     0.059       1      23 []      94     116 ..      94     116 .. 0.98
   2 ?    2.1   0.5       0.1   3.1e+02       2      21 ..     123     142 ..     122     143 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2e-05
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 ++Cp+C+k++ +  +LkrH+ +H
  KHJ31442.1  94 FPCPHCTKTYLHAKHLKRHLLRH 116
                 89********************9 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.1
                 EETTTTEEESSHHHHHHHHH CS
     zf-C2H2   2 kCpdCgksFkrksnLkrHir 21 
                  C  C  +F+r++ LkrH +
  KHJ31442.1 123 MCILCRDTFSRSDILKRHFQ 142
                 56678889**********65 PP

>> Med3  Mediator complex subunit 3 fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   7.5   0.00019      0.56     233     285 ..      15      69 ..       3     102 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00019
        Med3 233 npnqvqtPiaanamnnmn.am.raalpnptpsmlnsvsPtnvmGtPltnmmsPma 285
                  p q   P++ n m nm+  m ++  pn   +m+++ sPt v+G+    ++ P a
  KHJ31442.1  15 MPPQAMRPMSHNGMHNMQgGMpSPYAPNNMLQMVDMKSPTHVVGSQGRRGILPSA 69 
                 5778889**********9656245689*****************99888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1713.60
//
Query:       KHJ31443.1  [L=447]
Description: putative aspartyl protease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-60  205.8   5.4    1.2e-60  205.6   5.4    1.1  1  Asp             Eukaryotic aspartyl protease
    7.7e-07   29.5   2.8     0.0033   17.7   1.1    3.0  3  TAXi_N          Xylanase inhibitor N-terminal
     0.0048   17.5   3.8          1   10.0   1.1    3.4  2  Asp_protease_2  Aspartyl protease
  ------ inclusion threshold ------
      0.099   12.4   0.1       0.31   10.8   0.1    2.0  1  TAXi_C          Xylanase inhibitor C-terminal


Domain annotation for each model (and alignments):
>> Asp  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.6   5.4   2.8e-64   1.2e-60       1     314 [.     134     445 ..     134     446 .. 0.93

  Alignments for each domain:
  == domain 1  score: 205.6 bits;  conditional E-value: 2.8e-64
                 EEEEEEEETTTTEEEEEEEETT--SEEEEBTTESTSHCHHTSS-B-GGG-TT-E.EEEEEEEEECTTS.EEEEEEEEEEEEETTEEEEEEEEEEEEEES CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp   1 eYfgeisiGtpeqkftvifDTGSsdlWVpsskckkssackshstydpskSstyk.kngkslsisYGdg.svsGflsqdtvkvggltvknqefgeatkep 97 
                 eY+++isiG   q  +++fD GSsdlWV+s++        +h+tyd++kS t++   g++++i+YGdg  +sG +++dtv +gg tv+++++++at  +
  KHJ31443.1 134 EYLSPISIG--GQMINMDFDSGSSDLWVFSTQLP-AASIGNHTTYDSKKSQTFQpMPGATFKIAYGDGsGASGNVGTDTVDIGGATVTKMTVELATAVS 229
                 699******..589******************98.78899**************889***********99***************************** PP

                 SHHHTTSSSSEEEE-S-GGGSCGG...SCCHHHHHHHTTSSSSSEEEEEE-STTSSEEEEEESSEEGGGEEEEEEEEEESS.TSSTEEEEEEEEETTEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx RF
         Asp  98 gstflaakfdGiLGlgfkeisvee...atpvfdnlvsqglikepvfsvylnreeeeggeivfGgvDeskykGsltyvpvts.kgywqielesvtvggkt 192
                 +s+++++  +G++Gl+++++++++   ++++f+  +    ++ pvf+  l   ++++g + fG +D+sk++G++ + p++  +g+wq+++++++vg+ +
  KHJ31443.1 230 QSFTADTGSNGLVGLALSKLNTVKptqQKTFFESAM--PSLNMPVFTADLR--NNAVGAYEFGNIDSSKFNGTMSWAPIDPsNGFWQFSTQKFQVGNGQ 324
                 *********************999776666677744..469*********5..99************************98699*************** PP

                 EEEEEEEEEEEETTCSSEEEEHHHHHHHHHHHTTEEE.ETTCEEEEETTGGGGSEEEEEEE.TTEEEEEEGGGGEEEESSSTTSEEEESEEECCTSSSE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp 193 vlcssgcqailDtGTsllalptsivekiakaigakks.esegeyvvdCdslsslpdisfti.ggakitvpvselvlkeeeseesqCilglvseeegdlw 289
                 ++ + g  ai+DtGT+l+  + +iv+++ ++++++k+  ++g +++ C++  +lpd+++++ g+   tv  s++ + + ++++++C+ g+ +  +++l 
  KHJ31443.1 325 TVDAPGGTAIADTGTTLMLTSPQIVNAYYSQVQGAKNdAQAGGITFPCNA--QLPDLKVDVgGNYMATVRGSDINFAPVDQAKTTCFGGV-QAIQSNLQ 420
                 ******************************9987665156799******8..9999999994456789**********************.9999**** PP

                 EEEHHHHTTEEEEEETTTTEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp 290 iLGdvFlrsayvvfdldnnrvglAe 314
                 i Gd+  +s +v f+l+nn +g+A+
  KHJ31443.1 421 IYGDIMFKSQFVAFNLGNNSLGMAP 445
                 ***********************96 PP

>> TAXi_N  Xylanase inhibitor N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00019      0.85       1      55 [.     135     187 ..     135     191 .. 0.91
   2 !   17.7   1.1   7.4e-07    0.0033      80     155 ..     190     261 ..     187     267 .. 0.78
   3 ?   -0.4   0.0      0.27   1.2e+03      16      46 ..     333     363 ..     324     387 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00019
      TAXi_N   1 YlvsisiGtppqplklvvDtGsdltWvqCkpckacssqkkpvfdpsksstykavp 55 
                 Yl  isiG   q +++++D Gs+ +Wv  ++  a+s  +++++d +ks+t++++p
  KHJ31443.1 135 YLSPISIGG--QMINMDFDSGSSDLWVFSTQLPAASIGNHTTYDSKKSQTFQPMP 187
                 777788886..699***************99999******************987 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 7.4e-07
      TAXi_N  80 eyeisygadgssssGvlatdtltlsstdgksvkvpnlvfGCgk..snlgglaagadGilGLGrgklSlvsqlaskgsl 155
                 +++i yg dgs +sG+++tdt+ +     ++++v+++++  ++  s++ +  +g++G++GL+ +kl  v+ +++k+ +
  KHJ31443.1 190 TFKIAYG-DGSGASGNVGTDTVDI-----GGATVTKMTVELATavSQSFTADTGSNGLVGLALSKLNTVKPTQQKTFF 261
                 57899*7.****************.....55566666655555325566666799***********999998877655 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.27
      TAXi_N  16 lvvDtGsdltWvqCkpckacssqkkpvfdps 46 
                 +++DtG  l+ +  +  +a +sq +++ + +
  KHJ31443.1 333 AIADTGTTLMLTSPQIVNAYYSQVQGAKNDA 363
                 789*********9999999888888776654 PP

>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   1.1   0.00023         1       2      87 ..     138     243 ..     137     246 .. 0.57
   2 !    5.7   0.1     0.005        23      11      62 ..     332     380 ..     317     412 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00023
  Asp_protease_2   2 pvtinGkpvrfllDTGasttlis.pel.aeklgl.kvreseltvrvsg........aggevka..rlvrldslklggltlknvpalvld...... 77 
                     p++i+G+ +++ +D+G+s + +  ++l a+++g  ++++s+  ++++         a g+ ++    v  d++ +gg+t++ +++  +       
      KHJ31443.1 138 PISIGGQMINMDFDSGSSDLWVFsTQLpAASIGNhTTYDSKKSQTFQPmpgatfkiAYGDGSGasGNVGTDTVDIGGATVTKMTVELATavsqsf 232
                     789***************87555155423555442333333333332212222222444444401445566799999999999876555454566 PP

  Asp_protease_2  78 .lgeeidglLG 87 
                       +++++gl G
      KHJ31443.1 233 tADTGSNGLVG 243
                     55566667766 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.005
  Asp_protease_2  11 rfllDTGasttlispelaeklglkvreseltvrvsgaggevkarlvrldslk 62 
                     +++ DTG + +l sp+ +++   +v++ +++ +   agg ++   ++l++lk
      KHJ31443.1 332 TAIADTGTTLMLTSPQIVNAYYSQVQGAKNDAQ---AGGITFPCNAQLPDLK 380
                     89*****************99888887654444...4555666666666544 PP

>> TAXi_C  Xylanase inhibitor C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   6.9e-05      0.31      89     159 ..     373     443 ..     325     445 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 6.9e-05
                 -S----EEEEESSS-EEEE-GG..GGEEE-SSSEEEE-EEE--S--SSSEEE-HHHHBTS-EEEETTTTEEEE CS
      TAXi_C  89 gpavPtitlvleggaewtisge..nllvkveggvvClafvesgvagesavviGglqlednllvFDleksrlgF 159
                 ++++P++++   g+   t+ g+  n+    + +++C++ v+    +++  + G ++++   + F+l ++ lg 
  KHJ31443.1 373 NAQLPDLKVDVGGNYMATVRGSdiNFAPVDQAKTTCFGGVQA--IQSNLQIYGDIMFKSQFVAFNLGNNSLGM 443
                 567899999999866666666611444444477********9..9999*********************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      234  (0.0130515); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 3495.60
//
Query:       KHJ31444.1  [L=1450]
Description: putative urb2 npa2 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-55  186.3   0.1    2.7e-54  184.2   0.1    2.2  1  Urb2      Urb2/Npa2 family


Domain annotation for each model (and alignments):
>> Urb2  Urb2/Npa2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.2   0.1   1.5e-58   2.7e-54       4     204 ..    1208    1449 ..    1205    1450 .] 0.94

  Alignments for each domain:
  == domain 1  score: 184.2 bits;  conditional E-value: 1.5e-58
        Urb2    4 levlesllskkpalfsqynveqtLslvstvlspssaeess....eifsalckllssilrhhrdklsgrfhlllavlqaLlellra............ 84  
                   e+l+ +l++kp+++sqy+v+ tL++++ ++sp s +  +    +if +l kll+sil +hr kl+g+f+l+  ++q+Ll++l++            
  KHJ31444.1 1208 SETLDLMLRTKPRSISQYTVDITLGTICILCSPESPHLPTkrpgTIFLHLSKLLRSILNYHRLKLNGHFPLVQLSMQGLLRCLFQfrpkkfcrnitd 1304
                  57899****************************66555559***********************************************999999999 PP

        Urb2   85 ................eetsgstelsakhAkalaRlltslceptvssv........ssLtsetsslkkplgkhapllLvaYiklqleggiprevrea 157 
                                  + t+++ +l+a++A++++Rllt + +p+ ssv        ++Lts++++ k+ +  ++ ++L++Yi+  l++++ +e++e+
  KHJ31444.1 1305 tstsnptiaefdsmpiWLTNTNYQLNARNAESYTRLLTLISDPSESSVqgskyrisNHLTSAADKWKRRAVLFMRFVLMSYIRWTLKFPMLPEIKEQ 1401
                  98887777666655554499***********************99999*******999*************************************** PP

        Urb2  158 LepGiyaildvlsqeelrllnaaL.dasgravfkeLykdYkkfgKwkg 204 
                  L+pG++a+ld ++ +++rl+na L ++s ra+f +Ly++Y+kfgKw+g
  KHJ31444.1 1402 LMPGWFALLDNTTTDTRRLINAELlNSSNRAIFTNLYREYQKFGKWNG 1449
                  **********************999*********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       747  (0.0416643); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.88u 0.27s 00:00:01.14 Elapsed: 00:00:00.47
# Mc/sec: 9280.83
//
Query:       KHJ31445.1  [L=195]
Description: hypothetical protein EV44_g6316 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1414.73
//
Query:       KHJ31446.1  [L=911]
Description: putative u3 small nucleolar rna-associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.4e-51  170.1  28.3    1.2e-07   32.3   0.3   11.2 11  WD40          WD domain, G-beta repeat
    2.8e-45  153.7   1.4      6e-45  152.6   1.4    1.6  1  Utp13         Utp13 specific WD40 associated domain
    1.5e-12   47.7   9.4       0.22   11.8   0.0    8.2  8  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
    9.4e-06   25.2   1.2       0.78    9.0   0.0    4.7  5  WD40_like     WD40-like domain
    0.00011   21.1  15.3      0.039   12.6   0.0    6.9  8  Nup160        Nucleoporin Nup120/160
  ------ inclusion threshold ------
      0.013   14.5   3.7        2.2    7.1   0.0    3.6  4  PALB2_WD40    Partner and localizer of BRCA2 WD40 domain
       0.16   11.5   0.1       0.89    9.1   0.0    2.3  2  Phage_TTP_13  Phage tail tube protein family


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       5.4   1.4e+04      13      37 ..      64      88 ..      53      89 .. 0.74
   2 !   22.9   0.0   4.5e-08   0.00011       3      38 .]     104     140 ..     102     140 .. 0.94
   3 !   13.2   0.0   5.2e-05      0.13      25      38 .]     203     216 ..     193     216 .. 0.87
   4 !   32.3   0.3   4.6e-11   1.2e-07       3      38 .]     222     258 ..     220     258 .. 0.92
   5 ?   -0.8   0.0       1.3   3.3e+03      32      38 .]     293     299 ..     279     299 .. 0.87
   6 !   24.3   0.8   1.6e-08   4.1e-05       5      38 .]     416     450 ..     412     450 .. 0.88
   7 !    8.1   0.0    0.0021       5.3       3      37 ..     460     511 ..     458     511 .. 0.72
   8 !   26.0   0.0   4.6e-09   1.2e-05       5      38 .]     530     564 ..     526     564 .. 0.91
   9 !   19.7   0.2   4.5e-07    0.0011       2      38 .]     569     620 ..     568     620 .. 0.69
  10 !   23.4   0.1   2.9e-08   7.4e-05       2      38 .]     625     670 ..     624     670 .. 0.77
  11 !   10.8   0.2   0.00028      0.72       6      37 ..     679     711 ..     674     712 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 5.4
                EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40 13 vtslafspdgawlasGsdDgtvriW 37
                ++ l   p+ + l+ +s+  ++ri+
  KHJ31446.1 64 ISTLTLTPSASHLIICSRSLSLRIY 88
                5566667888888888888888887 PP

  == domain 2  score: 22.9 bits;  conditional E-value: 4.5e-08
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++rtl+ H s+vt la+ ++++++a+G  Dg v++Wd
  KHJ31446.1 104 LVRTLKPHtSPVTVLAVEQSSTLFATGAADGVVKVWD 140
                 799*****999****************99*******9 PP

  == domain 3  score: 13.2 bits;  conditional E-value: 5.2e-05
                 EEEEETTSEEEEEE CS
        WD40  25 lasGsdDgtvriWd 38 
                 +asGs Dg+vriWd
  KHJ31446.1 203 IASGSQDGKVRIWD 216
                 79***********9 PP

  == domain 4  score: 32.3 bits;  conditional E-value: 4.6e-11
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 c   l+ H s+vt+l+fsp+++ l++Gs+D+t++ Wd
  KHJ31446.1 222 CASLLDSHvSDVTCLDFSPEKNILLTGSRDKTIMWWD 258
                 6666889*9***************************9 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 1.3
                 SEEEEEE CS
        WD40  32 gtvriWd 38 
                 g++riW+
  KHJ31446.1 293 GNIRIWN 299
                 79****8 PP

  == domain 6  score: 24.3 bits;  conditional E-value: 1.6e-08
                 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                   ltGH + + +l+ + +g+w+a+G +D+t r+W+
  KHJ31446.1 416 AQLTGHEDiIICLDIDWSGHWIATGAKDNTARLWK 450
                 5699**55468***********************6 PP

  == domain 7  score: 8.1 bits;  conditional E-value: 0.0021
                 EEEEEESS.SSEEEEE.............EETTSSE........EEEEETTSEEEEE CS
        WD40   3 clrtltGH.ssvtsla.............fspdgaw........lasGsdDgtvriW 37 
                 c  +l+GH  sv +++                   +        +++Gs D+t++ W
  KHJ31446.1 460 CYAILSGHaESVGAISlphqippesspafK-----LpleyppqfIITGSQDQTIKKW 511
                 778899998889988777887766444440.....26666666599*********88 PP

  == domain 8  score: 26.0 bits;  conditional E-value: 4.6e-09
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +t ++H +++++++++ +++ +as+s D+tv+iWd
  KHJ31446.1 530 YTRKAHdKDINAIDVNYNSQIFASASQDKTVKIWD 564
                 55679*999*************************9 PP

  == domain 9  score: 19.7 bits;  conditional E-value: 4.5e-07
                 EEEEEEESS.SSEEEEE...............EETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtsla...............fspdgawlasGsdDgtvriWd 38 
                 + +++l+GH  +v+s++               +s  g  +++Gs D+tv+iW+
  KHJ31446.1 569 EIQGVLRGHkRGVWSVKfasqeisnianisggVSGKGL-VLTGSGDKTVKIWS 620
                 67899****555****8666665555555554444444.458988*******5 PP

  == domain 10  score: 23.4 bits;  conditional E-value: 2.9e-08
                 EEEEEEESS.SSEEEEE....EETTSSE.....EEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtsla....fspdgaw.....lasGsdDgtvriWd 38 
                 +clrt++GH +sv  ++      pd++      ++sG+ Dg v++Wd
  KHJ31446.1 625 TCLRTFEGHsNSVLKVCwltlPKPDNRKkyvqiVSSGG-DGLVKVWD 670
                 69*******99999996666644444447788566788.*******9 PP

  == domain 11  score: 10.8 bits;  conditional E-value: 0.00028
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 tl+ H + v++l +++  ++++sGs D tv +W
  KHJ31446.1 679 TLDNHeDRVWALTVNSRTNMIISGSGDSTVTFW 711
                 78899667****************99******* PP

>> Utp13  Utp13 specific WD40 associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.6   1.4   2.4e-48     6e-45       1     142 []     733     905 ..     733     905 .. 0.99

  Alignments for each domain:
  == domain 1  score: 152.6 bits;  conditional E-value: 2.4e-48
                 -HHHHHHHHCCHHHHHHHHHHHSSSTHHHHHHHHHHHS-SS--STSSSSSHHHHHHHHC--HHHHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHS-HH CS
       Utp13   1 eqelqnllrkkdyreAiaLAlkldqpkrllkllkevleseeeeeesitgskevdevlkslskeqleklLkyirdWntnartsevAqrvLnailkslsae 99 
                 eq+lqn++++k yreAi+LAl+l++p+rll l+++v++s + e +s  g+++vd+vl+sl+++q+++lL+++rdWntn +t+++Aq++L +++ks++ +
  KHJ31446.1 733 EQQLQNYINAKSYREAITLALQLNHPGRLLALFTSVITSIP-EPDSLCGLRAVDNVLSSLTDDQIYNLLHRLRDWNTNVKTAPIAQKILWTLMKSYPSS 830
                 7************************************8775.9******************************************************** PP

                 HHHS--................................-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXX CS
       Utp13 100 ellele................................glkellealipYteRHlkRldrlveesylldytlqem 142
                 +l++l+                                + ke+++al  Y+e+H+k+ld+l++ syl++ytl+ m
  KHJ31446.1 831 RLSHLKrlgsqssrlvegkeknigfldnsnqqqqnsyyNTKEIWHALRVYSEKHYKKLDELIDASYLVEYTLKGM 905
                 ************************************************************************987 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0023       5.8      35      89 ..     109     162 ..      72     164 .. 0.83
   2 !   11.8   0.0   8.7e-05      0.22      49      90 ..     199     239 ..     183     241 .. 0.91
   3 !   10.3   0.1   0.00025      0.65      54      90 ..     204     239 ..     203     276 .. 0.62
   4 ?    0.2   0.0      0.37   9.5e+02      46      78 ..     279     311 ..     271     327 .. 0.76
   5 !    6.7   0.1    0.0036       9.1       5      68 ..     379     452 ..     376     462 .. 0.78
   6 !   11.4   0.1   0.00012      0.31      27      89 ..     527     586 ..     512     589 .. 0.82
   7 ?    4.4   0.2     0.018        46      25      89 ..     577     642 ..     572     645 .. 0.78
   8 ?    2.4   0.0     0.077     2e+02      54      87 ..     658     690 ..     651     699 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0023
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  + + s v+ La +++ +l+a + +dg v++ d+  g + h ++  +   ++ l++
   KHJ31446.1 109 KPHTSPVTVLAVEQSSTLFATGAADGVVKVWDIIRGYTTHVFRGPNVL-ISALHF 162
                  557789*********************************999876664.777765 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 8.7e-05
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  +g  +a + +dg+vr+ d +s ++ + l+ + ++ vtcl+++
   KHJ31446.1 199 KGLRIASGSQDGKVRIWDLYSRNCASLLDSHVSD-VTCLDFS 239
                  577899*************************995.****986 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.00025
  ANAPC4_WD40  54 avaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  a + +dg+vr+ d +s ++ + l+ + ++ vtcl+++
   KHJ31446.1 204 ASGSQDGKVRIWDLYSRNCASLLDSHVSD-VTCLDFS 239
                  55666666666666666666666666553.6666553 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.37
  ANAPC4_WD40  46 WkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                  + +dg     + s g++r+ + e+gk + s + 
   KHJ31446.1 279 FLEDGIYTYTGGSIGNIRIWNTEDGKEITSPQS 311
                  556666667788889***********9987655 PP

  == domain 5  score: 6.7 bits;  conditional E-value: 0.0036
  ANAPC4_WD40   5 ptmDLiAlatedgellvfRlng............qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldae 68 
                  p + L+Alat+++e+++  + g              + +l  ++++  + +L    +g+ +a + +d++ rl ++ 
   KHJ31446.1 379 PDNSLLALATNSEEIRIVSIGGeennaenpnyfgADIAQL--TGHEDIIICLDIDWSGHWIATGAKDNTARLWKID 452
                  78899***********999988666666644444444444..7778888899999999999999999999998765 PP

  == domain 6  score: 11.4 bits;  conditional E-value: 0.00012
  ANAPC4_WD40  27 qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  + v+t   +++d+ ++++  + + +++a a +d +v++ d ++g++   l+ ++   v ++++
   KHJ31446.1 527 KAVYTR--KAHDKDINAIDVNYNSQIFASASQDKTVKIWDLNEGEIQGVLRGHKR-GVWSVKF 586
                  556666..899**********************************9877776666.3666555 PP

  == domain 7  score: 4.4 bits;  conditional E-value: 0.018
  ANAPC4_WD40  25 ngqrvwtl.eedkedsevrsLaWkpdgklLav.aysdgevrlldaesgkvvhslsvksekavtclgW 89 
                    + vw++  +++e s++ +++   +gk L+  +  d +v++ + ++ +++++++ +s++ v ++ W
   KHJ31446.1 577 HKRGVWSVkFASQEISNIANISGGVSGKGLVLtGSGDKTVKIWSLSNYTCLRTFEGHSNS-VLKVCW 642
                  55668888545566677778888888887765267899*******************995.999988 PP

  == domain 8  score: 2.4 bits;  conditional E-value: 0.077
  ANAPC4_WD40  54 avaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  + +  dg v++ d+++g+v  +l+ ++++ v  l
   KHJ31446.1 658 VSSGGDGLVKVWDVNTGEVACTLDNHEDR-VWAL 690
                  566789****************9999884.6655 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.0    0.0018       4.6      10     141 ..     198     336 ..     193     357 .. 0.74
   2 ?    2.1   0.0     0.037        96       5      32 ..     427     454 ..     423     472 .. 0.79
   3 !    9.0   0.0    0.0003      0.78       2      64 ..     538     600 ..     537     607 .. 0.90
   4 ?    2.2   0.0     0.035        90      11      49 ..     604     641 ..     598     713 .. 0.79
   5 ?   -0.8   0.0       0.3   7.6e+02       3      28 ..     687     712 ..     685     731 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0018
   WD40_like  10 kkgslilyGgkddkctvlkleslesvsivesfedSvifvkllddd.lilvvtlDGtillslleneeevenekieedistvkviddkll..iGtnkGsiy 105
                  kg  i+ G++d k+++ +l s +  s+++s    v    +  ++  +l ++ D ti+  +++  ++ +   + e +  +  ++d ++   G++ G+i 
  KHJ31446.1 198 LKGLRIASGSQDGKVRIWDLYSRNCASLLDSHVSDVTCLDFSPEKnILLTGSRDKTIMWWDVKTWKIRKVVPVLELVESAGFLEDGIYtyTGGSIGNIR 296
                 577789999*******************9999999999999866537788999****999999999777888999999999999988522699999999 PP

   WD40_like 106 vfskdlqleevllgq.....sseIkeikiennkiysLsesa 141
                 +++ +   +e+++ q     +  I + +i +++i++   ++
  KHJ31446.1 297 IWNTE-DGKEITSPQspkgeTNGIVKSIIFKDFIFAVKTDH 336
                 99987.45555544311000334444444555666555555 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.037
   WD40_like   5 sidiskkgslilyGgkddkctvlklesl 32 
                  +di+  g+ i+ G+kd+++++ k++  
  KHJ31446.1 427 CLDIDWSGHWIATGAKDNTARLWKIDAA 454
                 689999*****************99864 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.0003
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDGt 64 
                 +i +id++ ++++++  ++d+++++ +l+ +e+  ++ + +  v  vk+ +++   ++ + G 
  KHJ31446.1 538 DINAIDVNYNSQIFASASQDKTVKIWDLNEGEIQGVLRGHKRGVWSVKFASQEISNIANISGG 600
                 6889*********************************************99988777777665 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.035
   WD40_like  11 kgslilyGgkddkctvlkleslesvsivesfedSvifvk 49 
                 kg l+l G+ d+++++ +l + +    +e+ ++Sv+ v 
  KHJ31446.1 604 KG-LVLTGSGDKTVKIWSLSNYTCLRTFEGHSNSVLKVC 641
                 55.889999999999999999999999999999998665 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 0.3
   WD40_like   3 iYsidiskkgslilyGgkddkctvlk 28 
                 ++++ ++ + ++i+ G+ d ++t   
  KHJ31446.1 687 VWALTVNSRTNMIISGSGDSTVTFWR 712
                 789999***************99764 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.42   1.1e+03     226     247 ..     120     141 ..     106     148 .. 0.71
   2 ?    3.1   0.1     0.012        30     236     257 ..     206     227 ..     200     234 .. 0.85
   3 ?    1.5   0.2     0.034        87     229     252 ..     241     264 ..     228     275 .. 0.82
   4 ?   -1.3   0.0      0.25   6.4e+02     223     244 ..     317     340 ..     293     354 .. 0.72
   5 ?   -0.5   0.0      0.14   3.5e+02     231     255 ..     497     521 ..     496     538 .. 0.82
   6 !    4.9   0.1    0.0032       8.3     226     250 ..     544     568 ..     513     573 .. 0.77
   7 !   12.6   0.0   1.5e-05     0.039     212     259 ..     587     633 ..     569     662 .. 0.72
   8 ?    1.6   0.6     0.034        86     239     275 ..     663     693 ..     653     842 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.42
                 ...TTTEEE.EEETT-EEEEEET CS
      Nup160 226 veigqtylf.alsrdgkLrvWnl 247
                 ve ++++lf +   dg+++vW++
  KHJ31446.1 120 VE-QSSTLFaTGAADGVVKVWDI 141
                 44.55555515579*******97 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.012
                 EETT-EEEEEETTTTEEEEEEE CS
      Nup160 236 lsrdgkLrvWnlltgkclatid 257
                  s+dgk+r+W+l +  c++  d
  KHJ31446.1 206 GSQDGKVRIWDLYSRNCASLLD 227
                 589***********99998655 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.034
                 TTTEEEEEETT-EEEEEETTTTEE CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkc 252
                 ++++l++ srd+++  W+++t k+
  KHJ31446.1 241 EKNILLTGSRDKTIMWWDVKTWKI 264
                 89******************9765 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 0.25
                 T.......TTTEEEEEETT-EEEE CS
      Nup160 223 vavvei..gqtylfalsrdgkLrv 244
                 +++v++   ++++fa+  d+++ +
  KHJ31446.1 317 NGIVKSiiFKDFIFAVKTDHTMTL 340
                 445555557888888888888765 PP

  == domain 5  score: -0.5 bits;  conditional E-value: 0.14
                 TEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 231 tylfalsrdgkLrvWnlltgkclat 255
                 +++ + s+d++++ W ++t+++  +
  KHJ31446.1 497 QFIITGSQDQTIKKWAVSTLQTSLS 521
                 588999*************997655 PP

  == domain 6  score: 4.9 bits;  conditional E-value: 0.0032
                 ...TTTEEEEEETT-EEEEEETTTT CS
      Nup160 226 veigqtylfalsrdgkLrvWnlltg 250
                 v+ ++++ +++s+d+++++W+l+ g
  KHJ31446.1 544 VNYNSQIFASASQDKTVKIWDLNEG 568
                 333899999*************976 PP

  == domain 7  score: 12.6 bits;  conditional E-value: 1.5e-05
                 -TT-ECEEEEET.....TTTEEEEEETT-EEEEEETTTTEEEEEEE-- CS
      Nup160 212 gasvalsldvavavveigqtylfalsrdgkLrvWnlltgkclatidll 259
                 ++ +  +++ +++ v+ g+ ++++ s d+++++W+l++++cl+t++  
  KHJ31446.1 587 ASQEISNIANISGGVS-GKGLVLTGSGDKTVKIWSLSNYTCLRTFEGH 633
                 4444555555666666.9**************************7655 PP

  == domain 8  score: 1.6 bits;  conditional E-value: 0.034
                 T-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESE CS
      Nup160 239 dgkLrvWnlltgkclatidllrdeeaqdessskstld 275
                 dg ++vW+++tg ++ t d         +++ ++t++
  KHJ31446.1 663 DGLVKVWDVNTGEVACTLDNH------EDRVWALTVN 693
                 788999999999998886665......2333333333 PP

>> PALB2_WD40  Partner and localizer of BRCA2 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0       2.1   5.4e+03     300     315 ..     132     147 ..     122     150 .. 0.77
   2 ?    7.1   0.0   0.00086       2.2     300     348 ..     208     255 ..     172     274 .. 0.85
   3 ?    1.6   0.0      0.04     1e+02     292     334 ..     548     589 ..     537     604 .. 0.78
   4 ?    4.4   0.1    0.0059        15     302     348 ..     664     709 ..     650     712 .. 0.82

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 2.1
  PALB2_WD40 300 tsGaiavWdlllghct 315
                 + G + vWd+++g  t
  KHJ31446.1 132 ADGVVKVWDIIRGYTT 147
                 5799999**9999766 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.00086
  PALB2_WD40 300 tsGaiavWdlllghctalllpesdesWslvrWsgtdsqllaGqkdGsvl 348
                   G + +Wdl+  +c++ll +++ ++ + + +s  +  ll+G +d +++
  KHJ31446.1 208 QDGKVRIWDLYSRNCASLLDSHV-SDVTCLDFSPEKNILLTGSRDKTIM 255
                 5689***********77777666.4567889************999986 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.04
  PALB2_WD40 292 dqlaaavltsGaiavWdlllghctalllpesdesWslvrWsgt 334
                 +q+ a+     ++ +Wdl  g+ + +l  +    Ws+ +++++
  KHJ31446.1 548 SQIFASASQDKTVKIWDLNEGEIQGVLRGHKRGVWSV-KFASQ 589
                 5556666667899**********************94.55544 PP

  == domain 4  score: 4.4 bits;  conditional E-value: 0.0059
  PALB2_WD40 302 GaiavWdlllghctalllpesdesWslvrWsgtdsqllaGqkdGsvl 348
                 G + vWd+  g+ +  l  + d+ W+l   s t+ ++++G  d +v 
  KHJ31446.1 664 GLVKVWDVNTGEVACTLDNHEDRVWALTVNSRTN-MIISGSGDSTVT 709
                 6799***********************9887765.677888777775 PP

>> Phage_TTP_13  Phage tail tube protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       1.7   4.4e+03      81     100 ..     730     749 ..     714     757 .. 0.64
   2 ?    9.1   0.0   0.00035      0.89      53      95 ..     843     885 ..     835     896 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.7
  Phage_TTP_13  81 aekrdtvqfyvelpnkrtvl 100
                    e+ + +q y++    r ++
    KHJ31446.1 730 VEQEQQLQNYINAKSYREAI 749
                   57777788888777666554 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00035
  Phage_TTP_13  53 sdlpegpekslgfiddpknsdfveflnaaekrdtvqfyvelpn 95 
                   s l eg ek +gf+d+ ++++  ++ n+ e  ++++ y e   
    KHJ31446.1 843 SRLVEGKEKNIGFLDNSNQQQQNSYYNTKEIWHALRVYSEKHY 885
                   7799**************************9999999877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (911 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.74u 0.30s 00:00:01.04 Elapsed: 00:00:00.47
# Mc/sec: 5809.77
//
Query:       KHJ31447.1  [L=159]
Description: hypothetical protein EV44_g1782 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1161.34
//
Query:       KHJ31448.1  [L=259]
Description: hypothetical protein EV44_g2029 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-32  111.7   2.3    6.5e-32  110.9   2.3    1.4  1  ECM11     Extracellular mutant protein 11
    0.00098   18.5   1.9     0.0018   17.7   1.9    1.3  1  GAS       Growth-arrest specific micro-tubule binding


Domain annotation for each model (and alignments):
>> ECM11  Extracellular mutant protein 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.9   2.3   7.2e-36   6.5e-32       1     133 []     107     251 ..     107     251 .. 0.91

  Alignments for each domain:
  == domain 1  score: 110.9 bits;  conditional E-value: 7.2e-36
       ECM11   1 DyddeelqqmsyseLekepFdhdpaappaelppsl.dtsetleekleelkn.l.nekeqh..........effsslsideWeeaGdwlldqfsellkkl 86 
                 Dydde l++m+y +L+++p++  p++++   p +l  ++ +le+k++ +   + +ek+ +           f ++ls +eW+eaG+ ++++f+el+++l
  KHJ31448.1 107 DYDDENLKKMTYCDLDAQPWEEIPSKKTFAYPRELrVSGINLEAKINFYLAgAhKEKS-NvdgpgrkaalAFYEQLSSKEWDEAGEIFIHKFTELMQRL 204
                 9*************************9999999999*********9997772433333.23555556677***************************** PP

       ECM11  87 keaRrakrktaaefeaeierReeavrkkgeeldrkLeemkegGkevL 133
                 +++Rr+kr++a++fe++i+ Re+a+rkk++ +++kL++m++gG+++L
  KHJ31448.1 205 QDKRREKRELAQRFESMIKSRERAIRKKTSVIEKKLQDMRAGGENLL 251
                 ********************************************987 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   1.9     2e-07    0.0018     110     159 ..     199     248 ..     188     250 .. 0.92

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 2e-07
         GAS 110 vleqrfekvekerdelykkfeaaiqevqqktglknllLekklkalqeelE 159
                  l qr++   +e+ el ++fe++i+     +  k  ++ekkl+ +++  E
  KHJ31448.1 199 ELMQRLQDKRREKRELAQRFESMIKSRERAIRKKTSVIEKKLQDMRAGGE 248
                 688999**************************************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1425  (0.0794802); expected 358.6 (0.02)
Passed bias filter:                      826  (0.0460706); expected 358.6 (0.02)
Passed Vit filter:                        83  (0.00462937); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 1860.78
//
Query:       KHJ31449.1  [L=260]
Description: putative heterochromatin protein one protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-21   76.2   0.7    1.1e-17   63.9   0.0    2.5  2  Chromo_shadow  Chromo shadow domain
    8.8e-14   51.2   2.0    2.2e-13   49.9   2.0    1.7  1  Chromo         Chromo (CHRromatin Organisation MOdifier) doma
  ------ inclusion threshold ------
       0.17   11.5   0.1       0.17   11.5   0.1    2.0  3  Spt20          Spt20 family


Domain annotation for each model (and alignments):
>> Chromo_shadow  Chromo shadow domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.2   8.2e-05      0.49       2      26 ..      74     100 ..      73     112 .. 0.87
   2 !   63.9   0.0   1.8e-21   1.1e-17       1      53 []     194     249 ..     194     249 .. 0.98

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 8.2e-05
                    TTTTEEEE.EE.TS-EEEEEEETTS-E CS
  Chromo_shadow   2 pekiigav.dt.sgelmflikWkngek 26 
                    +eki+ +v d+ +gel f ikW++ ek
     KHJ31449.1  74 VEKILNHVvDEeTGELRFEIKWEGYEK 100
                    79***998777799*********9766 PP

  == domain 2  score: 63.9 bits;  conditional E-value: 1.8e-21
                    TTTTTEEEEEE....TS-EEEEEEETTS-EEE.EEHHHHHHHSHHHHHHHHHCT-XX CS
  Chromo_shadow   1 epekiigavdt....sgelmflikWkngekaelvpskeanqkcPqkvikFYEerltw 53 
                    ++e+ + a+d      g+++++++Wk+g+k++ +p+++++++cPqk+++FYE +l++
     KHJ31449.1 194 SWEEDVTAIDAcegtQGNILVFLTWKGGHKSQ-HPLHQVYKRCPQKMLQFYEAHLVF 249
                    7*************9*****************.**********************98 PP

>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   2.0   3.6e-17   2.2e-13       1      52 [.      72     123 ..      72     125 .. 0.94

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 3.6e-17
                 EEEEEEEEEEEETTEECEEEEEEETTSTGGGT.EEEEGGGCSSHSHHHHHHHH CS
      Chromo   1 yeVerIidhrtdkdgleleYlVKWkglpysen.tWEpeenlekcfqelideFk 52 
                 y+Ve+I++h +d++++el + +KW+g+  +++ tWEpeenle+   +++ e+ 
  KHJ31449.1  72 YVVEKILNHVVDEETGELRFEIKWEGYEKKSDrTWEPEENLESA-SKILNEYL 123
                 89***************************8888*********99.99999996 PP

>> Spt20  Spt20 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   2.8e-05      0.17      87     145 ..       7      69 ..       6      82 .. 0.74
   2 ?   -2.1   0.5       0.4   2.4e+03     137     165 ..     149     177 ..     133     187 .. 0.45
   3 ?   -3.0   0.0      0.77   4.6e+03      73      93 ..     230     253 ..     226     255 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.8e-05
       Spt20  87 lIvqvrDhrnsvaqsqktqdqkqsq..qnqqqqqqqqqqqqqqqq..qqeqqqqqnekdsttt 145
                 lI++++D+ +s++ s  + d+k+++  ++++ +++  +++++ ++  + eqq +++++d+ t+
  KHJ31449.1   7 LIAEISDYERSPSESGVSVDSKNQEftKEEKVANSMAVEEPEPEEslMVEQQDDDKDDDELTE 69 
                 8**************988899999999888888888777777666335555555555554443 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.4
       Spt20 137 qnekdsttteekekksksknnsskskttt 165
                  ++   ++  ++++ +k  ++s +++  t
  KHJ31449.1 149 GKKRGRASGGKTSNGQKRRKTSDSHPAST 177
                 22222333333333333333333333333 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 0.77
       Spt20  73 elLrdan...ikfYeGclIvqvrD 93 
                 +++++++   ++fYe  l+ + +D
  KHJ31449.1 230 QVYKRCPqkmLQFYEAHLVFRKSD 253
                 677777777788888888777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1175  (0.0655363); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1959.96
//
Query:       KHJ31450.1  [L=319]
Description: putative s-adenosyl-l-methionine-dependent methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.2e-19   69.3   0.0    4.4e-19   68.9   0.0    1.2  1  Methyltransf_23  Methyltransferase domain
    5.5e-10   39.8   0.0    1.4e-09   38.5   0.0    1.7  1  Methyltransf_25  Methyltransferase domain
    1.4e-06   28.9   0.0    3.3e-06   27.6   0.0    1.7  1  Methyltransf_11  Methyltransferase domain
    3.8e-05   24.4   0.0    0.00028   21.6   0.0    2.2  1  Methyltransf_12  Methyltransferase domain
    0.00022   21.4   0.0     0.0004   20.5   0.0    1.4  1  FtsJ             FtsJ-like methyltransferase
     0.0018   18.1   0.0     0.0085   15.9   0.0    2.0  1  Methyltransf_31  Methyltransferase domain
      0.008   15.5   0.0      0.041   13.2   0.0    1.9  1  CMAS             Mycolic acid cyclopropane synthetase
  ------ inclusion threshold ------
      0.011   15.0   0.0      0.018   14.4   0.0    1.4  1  Methyltransf_2   O-methyltransferase domain
      0.036   13.5   0.0      0.063   12.7   0.0    1.4  1  Methyltransf_4   Putative methyltransferase
       0.08   12.5   0.0       0.15   11.6   0.0    1.4  1  MTS              Methyltransferase small domain
       0.13   12.0   0.0       0.24   11.1   0.0    1.4  1  Met_10           Met-10+ like-protein


Domain annotation for each model (and alignments):
>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.9   0.0   2.7e-22   4.4e-19       9     164 ..      63     237 ..      52     238 .. 0.80

  Alignments for each domain:
  == domain 1  score: 68.9 bits;  conditional E-value: 2.7e-22
  Methyltransf_23   9 lsdklerll......pklraggrvLdiGcGtGillevlrengf..svtgvDlspeaveiaekakkaqkdqfdeqeaaepqgkfdlIvlr.evle 93 
                      + d+++ ++      +  r + +++d+G+GtG ++    +++   +v+g+Dlsp++ +++  a++ ++   d ++ +  ++++ lI++r ++ +
       KHJ31450.1  63 VNDAINLIFegkpffAPVRNPHKIVDMGTGTGAWAIDVGDQFPeaHVVGIDLSPIQPKWV--APNVEFRVDDIDQPWAFSRSISLIHSRlMSGH 154
                      44666655543322233677779***************99987789*************7..9999999999999999**********935556 PP

  Methyltransf_23  94 hvpdppellrqiatllkpgGylllseplasl........kedrllldwlylvpag..rhi..sffsarslkelleeaGlevve 164
                      +++++p+++r+ +++l+pgG+++ +e++            +d+ +l+w+ ++++g  r +     sa++++ ++e+aG+ +v+
       KHJ31450.1 155 SIRNWPSYFRKCYAHLSPGGWVEAQEVTLTPrcassgpfLSDSYILEWHKIFHHGmrRAGydLNVSADDIAAAMEDAGFINVH 237
                      688***********************63322458888866999*********99975333656679*************9886 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.0   8.7e-13   1.4e-09       1      97 []      86     174 ..      86     174 .. 0.88

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 8.7e-13
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHHEE CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeeglnvefvqgdaedlpfedgsfDlvvssgalhhlsdedlekalkeiarvLk 94 
                      ++d+G+GtG +++++ +++++a+v+g+D+s+ + + ++       +nvef++ d+++    ++s+ l++s+ +  h s ++++ ++++++ +L 
       KHJ31450.1  86 IVDMGTGTGAWAIDVGDQFPEAHVVGIDLSPIQPKWVA-------PNVEFRVDDIDQPWAFSRSISLIHSRLMSGH-SIRNWPSYFRKCYAHLS 171
                      89*****************99**********9988764.......5679******99666667*******766444.6679************* PP

                      EEE CS
  Methyltransf_25  95 pgG 97 
                      pgG
       KHJ31450.1 172 PGG 174
                      **9 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0     2e-09   3.3e-06       1      94 [.      87     176 ..      87     178 .. 0.90

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 2e-09
                      EEET-TTSHHHHHHHHTT..SEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCCT.SS-TT-EEEEEEES-CCC-.CCHHHHHHHHHHHEEE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg..arvvgvDlskemlklakekaseeglkvefvvadaekl.pfednsfDlvvssevlhhv.edpekalkeiaRvLkp 90 
                      +d+G+GtG+ a ++ +++  a+vvg+Dls+ + k++      +  +vef+v d+ +   f   s+ l+ s+ +  h   ++ +++++++  L p
       KHJ31450.1  87 VDMGTGTGAWAIDVGDQFpeAHVVGIDLSPIQPKWV-----AP--NVEFRVDDIDQPwAFSR-SISLIHSRLMSGHSiRNWPSYFRKCYAHLSP 172
                      599************999***************998.....23..3899******9535655.*********999988**************** PP

                      EEEE CS
  Methyltransf_11  91 gGll 94 
                      gG++
       KHJ31450.1 173 GGWV 176
                      **86 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   1.7e-07   0.00028       1      99 []      87     176 ..      87     176 .. 0.83

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 1.7e-07
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg.ssfDlvvas.nvlhhlkdirevldnirkl 92 
                      ++ G+GtG+ +  + +++p+++++g+D+sp +         k+    + nve++++d+++      s  l+++     h ++++ +++++++++
       KHJ31450.1  87 VDMGTGTGAWAIDVGDQFPEAHVVGIDLSPIQP--------KWV---APNVEFRVDDIDQPWAFsRSISLIHSRlMSGHSIRNWPSYFRKCYAH 169
                      599***************************999........444...35677777775544444779*****994555556************* PP

  Methyltransf_12  93 LkpgGrl 99 
                      L+pgG++
       KHJ31450.1 170 LSPGGWV 176
                      *****85 PP

>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   2.5e-07    0.0004      22      73 ..      80     136 ..      52     156 .. 0.80

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 2.5e-07
                 T...-EEEECT-TTSHHHHHHCCT.T.-SEEEEEESSSSHHH...TTEEEECS-CCCS CS
        FtsJ  22 g...ktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmapl...pgvttiqgditdp 73 
                 +   +++vD g ++G+w+  +  ++ + ++vv++Dl p++p    p+v++   di +p
  KHJ31450.1  80 VrnpHKIVDMGTGTGAWAIDVGDQFPE-AHVVGIDLSPIQPKwvaPNVEFRVDDIDQP 136
                 233367************999999975.***********999999*****99999765 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   5.2e-06    0.0085       6      38 ..      85     116 ..      81     184 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 5.2e-06
  Methyltransf_31   6 rvlDlGCGtGeltfelaeelgpkaevvGiDise 38 
                      +++D G+GtG+ ++      +p+a+vvGiD s+
       KHJ31450.1  85 KIVDMGTGTGAWAIDVG-DQFPEAHVVGIDLSP 116
                      799**************.6689********997 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   2.5e-05     0.041      64     193 ..      84     209 ..      78     249 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.5e-05
                 -EEEEES-TTSHHHHHHHHHH.--EEEEEES-HHHHHHHHHHHHTS-SSS-EEEEES-GGG-----SEEEEES-GGGTSGGGHHHHHHHHHHHS-TT-E CS
        CMAS  64 mtlLdiGcGWGslvrravery.dvkvvglTlSkeqaklakkrvdeldlerkvevklldyedldekvdrvvsvgafehvgkenydtffkklkkllkedGl 161
                 ++++d+G+G G+ ++   +++ +++vvg+ lS  q k++  +v+ +      +++ + +  ++  +  + s  +  h   +n++ +f+k++  l ++G 
  KHJ31450.1  84 HKIVDMGTGTGAWAIDVGDQFpEAHVVGIDLSPIQPKWVAPNVEFRV----DDID-QPW-AFSRSISLIHSRLMSGH-SIRNWPSYFRKCYAHLSPGGW 175
                 6899*************9999789**************988876432....2332.445.48888888888777766.689****************** PP

                 EEEEEEEE--HHHHHCTTCCCHHHHH..HTSTTS CS
        CMAS 162 lllhtitslhkkelaerglklkfidk..eiFPgG 193
                 +  + +t + +   +   l+ ++i +  +iF +G
  KHJ31450.1 176 VEAQEVTLTPRCASSGPFLSDSYILEwhKIFHHG 209
                 *999998876666655555555554322566666 PP

>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   1.1e-05     0.018      64      96 ..      84     116 ..      34     132 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.1e-05
                     SEEEEET-TTSHHHHHHHHH-TT-EEEEEE-HH CS
  Methyltransf_2  64 kslvDvGGGtGalakaivsayPtikvivfDlpe 96 
                     +++vD+G GtGa a  +  ++P+ +v+  Dl+ 
      KHJ31450.1  84 HKIVDMGTGTGAWAIDVGDQFPEAHVVGIDLSP 116
                     689***************************975 PP

>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.9e-05     0.063       5      34 ..      86     115 ..      82     127 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.9e-05
                     EEEET-TTSHHHHHHHHHSTTSEEEEEES- CS
  Methyltransf_4   5 vleiGcGkGeflvalAkknPdknflGiEir 34 
                     ++++G+G G + ++   ++P+  ++Gi+++
      KHJ31450.1  86 IVDMGTGTGAWAIDVGDQFPEAHVVGIDLS 115
                     79*************************976 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   9.2e-05      0.15      32      64 ..      83     115 ..      77     125 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 9.2e-05
                 CSEEEEET-TTSHHHHHHHHHTTC.EEEEEESB CS
         MTS  32 sgkvlDlGcGaGvlgaalakespeaevtlvdvd 64 
                  +k++D+G+G+G+ ++ + ++ pea+v+ +d +
  KHJ31450.1  83 PHKIVDMGTGTGAWAIDVGDQFPEAHVVGIDLS 115
                 578***********************9999875 PP

>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00014      0.24      98     145 ..      80     127 ..      67     137 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00014
                 --TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHH CS
      Met_10  98 veegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkenik 145
                 v++   +vd+  G G +ai ++    +  v++idl P   k++  n++
  KHJ31450.1  80 VRNPHKIVDMGTGTGAWAIDVGDQFPEAHVVGIDLSPIQPKWVAPNVE 127
                 5566789****************999999*********9999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2317.13
//
Query:       KHJ31451.1  [L=365]
Description: putative dhhc zinc finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-27   95.9  16.1    7.8e-27   94.0  12.1    2.9  2  DHHC      DHHC palmitoyltransferase


Domain annotation for each model (and alignments):
>> DHHC  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1      0.17   3.1e+03      56      69 ..      82      95 ..      60     127 .. 0.54
   2 !   94.0  12.1   4.4e-31   7.8e-27       5     132 ..     155     268 ..     151     270 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.17
        DHHC 56 lylllllilalvll 69
                ++++lll +  +++
  KHJ31451.1 82 IFFMLLLGVSEIIF 95
                33333333333333 PP

  == domain 2  score: 94.0 bits;  conditional E-value: 4.4e-31
        DHHC   5 lkfCstcniykpprskHcrvCnrcvlrfDHhCpwlnnciGerNykyFllfllylllllilalvlllialvklveeekkseflavtllkkllsilllvls 103
                   fC+tc+  kp+rskHc++C+rc+ + DHhC+++nnc+G+rN++yF+l++ +++ll+++a+++ +  l++ +++e  s               ++   
  KHJ31451.1 155 GLFCNTCRFLKPARSKHCSICKRCISKVDHHCIFINNCVGQRNHHYFILLISTTALLTTYATYVGISLLSEDIRKELPS--------------WTIRGR 239
                 569****************************************************************999999887764..............344555 PP

        DHHC 104 llfllllgllllfhlylilrnlTtieamk 132
                    +   + ll +hlyli+ + Tt+e++k
  KHJ31451.1 240 GYSWTQYSGLLSYHLYLIWIGATTNETLK 268
                 66677778888888888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       651  (0.0363099); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2546.99
//
Query:       KHJ31452.1  [L=619]
Description: hypothetical protein EV44_g1021 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (619 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       554  (0.0308997); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 4683.99
//
Query:       KHJ31453.1  [L=638]
Description: hypothetical protein EV44_g5885 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.043   14.1   0.1       0.11   12.8   0.1    1.7  1  zf-Di19    Drought induced 19 protein (Di19), zinc-binding
      0.074   13.9   0.6       0.32   11.9   0.6    2.2  1  zf-C2H2_4  C2H2-type zinc finger


Domain annotation for each model (and alignments):
>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   1.3e-05      0.11       4      22 ..      31      49 ..      28      53 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.3e-05
     zf-Di19  4 tCPyCgkeltvkeLveHve 22
                +CP+C +++t ++L +H++
  KHJ31453.1 31 ACPFCHQQFTSSSLGRHLD 49
                7****************86 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.6   3.6e-05      0.32       2      20 ..      31      48 ..      30      50 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.6e-05
   zf-C2H2_4  2 kCpiCgksFsskkaLlrHl 20
                 Cp+C++ F ++++L rHl
  KHJ31453.1 31 ACPFCHQQF-TSSSLGRHL 48
                6********.99999***7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (638 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1201  (0.0669864); expected 358.6 (0.02)
Passed bias filter:                      598  (0.0333538); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 4363.67
//
Query:       KHJ31454.1  [L=113]
Description: hypothetical protein EV44_g2275 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.041   13.3   0.0      0.058   12.8   0.0    1.1  1  DUF3552   Domain of unknown function (DUF3552)
      0.058   13.9   0.1      0.075   13.5   0.1    1.2  1  DUF16     Protein of unknown function DUF16
       0.11   10.7   0.1       0.12   10.5   0.1    1.0  1  EzrA      Septation ring formation regulator, EzrA


Domain annotation for each model (and alignments):
>> DUF3552  Domain of unknown function (DUF3552)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   9.6e-06     0.058      67     125 ..      21      79 ..      16      87 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 9.6e-06
     DUF3552  67 eelekelkerrnelqrlekRllqkeetLdrkeeslekkeesleekekelkqkeqsleek 125
                 +e+ +e+ + rne++ l+  l+++ ++++r ++++e+++e +e  e +++++  ++++ 
  KHJ31454.1  21 TEARREFWDDRNEISMLQAALRDRPTNINRLNHNVENQQEPVEYGEVQVQEQVGQVDSS 79 
                 68889999****************************************99999888765 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   1.3e-05     0.075      33      84 ..      31      82 ..      18      98 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.3e-05
                HHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......H CS
       DUF16 33 kqrLkkieakvdklgeqinkleqkvekqgekikelkveqkaqgeelnkvdet 84
                 +++  ++a ++ +  +in+l+++ve+q+e ++  +v+++ q  ++++ ++t
  KHJ31454.1 31 RNEISMLQAALRDRPTNINRLNHNVENQQEPVEYGEVQVQEQVGQVDSSGNT 82
                4567778888889999999999999999999999999999998888876665 PP

>> EzrA  Septation ring formation regulator, EzrA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   2.1e-05      0.12     445     496 ..      26      77 ..      21      84 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 2.1e-05
                 HSTTTSTTTHHHHHHHT-TT--HHHHHHHHHTTTTTSGGGTHHHHHHHHHHH CS
        EzrA 445 elkeasdeieelakeLekkpinikevnkrldeardlveklyektneliktAt 496
                 e+ + ++ei+ l+  L  +p ni+++n+ +++ ++ ve  + +++e + ++ 
  KHJ31454.1  26 EFWDDRNEISMLQAALRDRPTNINRLNHNVENQQEPVEYGEVQVQEQVGQVD 77 
                 5667789******************************999999999888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       624  (0.0348039); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 828.14
//
Query:       KHJ31455.1  [L=886]
Description: putative arid-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-14   54.2   0.4    1.1e-11   44.6   0.0    2.8  2  Rap1_C          TRF2-interacting telomeric protein/Rap1 - C t
    6.9e-12   45.6   0.0      2e-11   44.2   0.0    1.9  1  BRCT_2          BRCT domain, a BRCA1 C-terminus domain
      2e-11   44.4   0.0    5.8e-11   42.9   0.0    1.9  1  ARID            ARID/BRIGHT DNA binding domain
    1.3e-08   34.9   0.1    5.5e-08   32.9   0.0    2.1  2  Myb_DNA-bind_2  Rap1 Myb domain
    1.5e-05   25.5   5.6     0.0017   18.9   0.1    3.4  3  Rap1-DNA-bind   Rap1, DNA-binding
     0.0053   17.1   0.3       0.15   12.4   0.0    2.8  2  BRCT            BRCA1 C Terminus (BRCT) domain
  ------ inclusion threshold ------
      0.083   13.0   0.0       0.18   12.0   0.0    1.5  1  PilI            Plasmid conjugative transfer protein PilI


Domain annotation for each model (and alignments):
>> Rap1_C  TRF2-interacting telomeric protein/Rap1 - C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.3    0.0034       8.8      36      80 ..     107     168 ..      73     170 .. 0.80
   2 !   44.6   0.0   4.4e-15   1.1e-11       5      82 ..     777     867 ..     773     869 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0034
      Rap1_C  36 r.gkglp.knkrGiWteedDeaL...............kagderdlerlekkhgeerierRr 80 
                 + ++++p k kr  +t+edD++L               +++  ++le+++  h++++ ++R+
  KHJ31455.1 107 NiEHKYPkKIKRTPFTSEDDRVLwefctkdnvikkgskGNTIFEKLEKINGRHTSQAWRARW 168
                 445566623345679******************98755445568999999999999999998 PP

  == domain 2  score: 44.6 bits;  conditional E-value: 4.4e-15
      Rap1_C   5 lGykdefithaLkatsldppvlanyvlealkr...gkglpknkrGiWteedDeaL...........kagderdlerlekkhgeerierRrkF 82 
                 lG++ ++i++aL+ats+ ++  ++++   lk     + +p++ +G+Wt++dDe L           + +d++ ++ l +khge ++++R ++
  KHJ31455.1 777 LGFSIKTIIRALEATSMAIG-PTSHIDTVLKTiekTDCIPEDLPGVWTTSDDELLkqailslssssSYTDSKIMKPLYRKHGEINVQLRQDY 867
                 8*****************99.6666666665553377******************9999999887555999******************988 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.2   0.0   7.7e-15     2e-11       2      85 .]      21      97 ..      20      97 .. 0.91

  Alignments for each domain:
  == domain 1  score: 44.2 bits;  conditional E-value: 7.7e-15
      BRCT_2  2 sklFeglrFYindaeps.psreklkklIeknGGevvetitsavyiviaesneeelaekrkrrvvspkyIkdCikkgkllplenyl 85
                + lF+g +F +   +++ p+++++ ++I++nGG + + +++a++i++ +         ++++++++kyI+d++++gkl ++e+y+
  KHJ31455.1 21 RPLFNGKKFLV---YQRiPQKSEIVEMIKANGGSIAKIEHDADIIITDHAL-----GHPRQNSIDWKYIRDSVQNGKLEDIEKYR 97
                579********...77779******************99999888777776.....679************************96 PP

>> ARID  ARID/BRIGHT DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   0.0   2.3e-14   5.8e-11       4      90 .]     384     470 ..     381     470 .. 0.79

  Alignments for each domain:
  == domain 1  score: 42.9 bits;  conditional E-value: 2.3e-14
                 HHHHHHHHHHH.HTTS.SSS----SSSS-STTHHHHHHTT..TSSHHHHTT.CHHHHHHHHHTS-..-.......HHHHHHHHHHHHHHHH CS
        ARID   4 eFlstLkqfhe.nrgt.lkkiPviggkevdlykLyraVik..rGGfrkvtqknkWeevaqklglpredpeasesvaqalksiYeryLlpyE 90 
                 +F+++  q+++ + g  ++  P+ig++e+ l+kL+++V++  +GG+++++ +n W+++a+ lg+ ++     + vaq+lk +Y+++L++ E
  KHJ31455.1 384 DFFKQSLQYLAdELGLeVNFNPQIGEREIPLMKLWKTVQSleFGGSKEMKVDNDWQRLAKSLGFIDH----ITMVAQELKDCYNEILADLE 470
                 555554455541445555778******************7335******9899***********753....3489************9866 PP

>> Myb_DNA-bind_2  Rap1 Myb domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.0   2.1e-11   5.5e-08       2      56 ..     118     171 ..     117     178 .. 0.93
   2 ?   -2.7   0.0       2.6   6.8e+03       5      27 ..     822     844 ..     821     856 .. 0.72

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 2.1e-11
  Myb_DNA-bind_2   2 RlpyteeeDaailkyvkekerspasvkGnkiwkelekkhltrHsWQslkdRylkr 56 
                     R+p+t+e+D ++ ++  + +  ++  kGn i+++lek +  rH+ Q+++ R+ k 
      KHJ31455.1 118 RTPFTSEDDRVLWEFCTKDNVIKKGSKGNTIFEKLEKING-RHTSQAWRARWTKY 171
                     9***************99999999**************99.***********986 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.6
  Myb_DNA-bind_2   5 yteeeDaailkyvkekerspasv 27 
                     +t  +D+++ +++   + s +++
      KHJ31455.1 822 WTTSDDELLKQAILSLSSSSSYT 844
                     68999999999998777666544 PP

>> Rap1-DNA-bind  Rap1, DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.1   6.7e-07    0.0017      52      81 ..     146     175 ..      95     181 .. 0.85
   2 !    7.2   0.7     0.003       7.7      55      97 ..     256     315 ..     202     322 .. 0.65
   3 ?   -3.0   0.0       4.5   1.1e+04       3      25 ..     823     845 ..     822     855 .. 0.82

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 6.7e-07
  Rap1-DNA-bind  52 refFkelakkkprHtensWrdryrKfvley 81 
                      +F++l k + rHt+++Wr+r+ K+v+++
     KHJ31455.1 146 NTIFEKLEKINGRHTSQAWRARWTKYVSSN 175
                    568************************875 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.003
  Rap1-DNA-bind  55 Fkel..................akkkprHtensWrdryrKfvleygidkyikyyekekaag 97 
                    F+ +                  ak +p+H  ++W+  +  +v    ++  i++y++ ++ +
     KHJ31455.1 256 FDAYseilsapeekkseawtswAKLNPTHKAEEWKTQFYEYVMPR-QEALIAKYQRMRKRS 315
                    3333444444455555555555********************975.789999999888776 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 4.5
  Rap1-DNA-bind   3 taedDyaLatevkkqflakikqk 25 
                    t +dD+ L +++ +  ++  + +
     KHJ31455.1 823 TTSDDELLKQAILSLSSSSSYTD 845
                    88999999999998888777765 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   5.9e-05      0.15       3      52 ..      21      67 ..      19     100 .. 0.79
   2 ?    1.3   0.3      0.18   4.7e+02      17      67 ..     658     708 ..     649     716 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.9e-05
                TTTTTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSS CS
        BRCT  3 ellfhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgep 52
                 +lf+g+kf +       +++e+ e+ik +GG++   + ++ +++++++ 
  KHJ31455.1 21 RPLFNGKKFLV--YQRIPQKSEIVEMIKANGGSI-AKIEHDADIIITDHA 67
                689********..666667**************9.777777777777765 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.18
                 TSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTS CS
        BRCT  17 ldnftrdeleelikehGGkvttevskktthlvvgepesrslkylealklni 67 
                  ++ +++e+ ++ ++hG k  +  s  ++  +v ++++ s++++ +l+ +i
  KHJ31455.1 658 SKSLDTTEIDQKFRSHGEKRKKKPSAANSVQIVRDSIENSTEKSFSLHDGI 708
                 6788999**************************999888888877777666 PP

>> PilI  Plasmid conjugative transfer protein PilI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0     7e-05      0.18      19      66 ..     113     160 ..     104     178 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 7e-05
        PilI  19 kkklssikatedidelirrfqtadngLvvvlrdsrilfrkeriPGssC 66 
                  kk+  ++ t + d +   f+t dn +    + + i  ++e+i G + 
  KHJ31455.1 113 PKKIKRTPFTSEDDRVLWEFCTKDNVIKKGSKGNTIFEKLEKINGRHT 160
                 589999***************************************885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (886 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       775  (0.0432261); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.69u 0.23s 00:00:00.92 Elapsed: 00:00:00.42
# Mc/sec: 6359.81
//
Query:       KHJ31456.1  [L=161]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       722  (0.04027); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1298.60
//
Query:       KHJ31457.1  [L=169]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0064   16.5   0.5     0.0064   16.5   0.5    3.5  4  zf-CCHC         Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   1.4      0.32   5.7e+03       3       8 ..      39      44 ..      38      45 .. 0.79
   2 ?   -2.8   0.1      0.47   8.3e+03      13      16 ..      48      51 ..      46      52 .. 0.68
   3 !   16.5   0.5   3.6e-07    0.0064       2      16 ..      56      70 ..      55      72 .. 0.91
   4 !    7.3   0.9   0.00029       5.2       2       9 ..      75      82 ..      75      86 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.32
                TSSSSS CS
     zf-CCHC  3 CynCGe 8 
                C +C++
  KHJ31457.1 39 CKRCNG 44
                999985 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.47
                TTTS CS
     zf-CCHC 13 ardC 16
                +++C
  KHJ31457.1 48 SKNC 51
                6788 PP

  == domain 3  score: 16.5 bits;  conditional E-value: 3.6e-07
                CTSSSSSSSSTTTTS CS
     zf-CCHC  2 kCynCGepGHiardC 16
                 C nCG++ H+a  C
  KHJ31457.1 56 SCANCGSTNHVADSC 70
                6************99 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.00029
                CTSSSSSS CS
     zf-CCHC  2 kCynCGep 9 
                kC+nCG+p
  KHJ31457.1 75 KCRNCGGP 82
                7*****87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      237  (0.0132188); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 1219.04
//
Query:       KHJ31458.1  [L=188]
Description: hypothetical protein EV44_g0600 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.25   11.4   0.6       0.38   10.8   0.0    1.6  2  DUF4762   Domain of unknown function (DUF4762)


Domain annotation for each model (and alignments):
>> DUF4762  Domain of unknown function (DUF4762)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2      0.42   7.5e+03      18      28 ..      41      51 ..      39      61 .. 0.61
   2 ?   10.8   0.0   2.1e-05      0.38      30      49 ..     163     183 ..     145     187 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.42
     DUF4762 18 ktcttsYekvt 28
                k++++ Y+k  
  KHJ31458.1 41 KCAEKVYKKYE 51
                66666666544 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 2.1e-05
     DUF4762  30 gg.vksCklVttCTdKhGkst 49 
                 gg  ++C+l++ C d +G + 
  KHJ31458.1 163 GGrIEACTLIRSCDDAFGSPS 183
                 44279*************765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1474.06
//
Query:       KHJ31459.1  [L=89]
Description: putative lsm domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-19   69.0   0.1    2.3e-19   68.8   0.1    1.1  1  LSM       LSM domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.8   0.1   1.3e-23   2.3e-19       2      66 ..      11      75 ..      10      76 .. 0.96

  Alignments for each domain:
  == domain 1  score: 68.8 bits;  conditional E-value: 1.3e-23
                HHHHTTTSEEEEEETTS.EEEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEEE CS
         LSM  2 flkklinkkvtvelkng.relrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivlis 66
                 l++l+n++v+++lk++ +e++G+L+++D +mN++L+ +ee++++k  + +lg+vliR+nn++ i+
  KHJ31459.1 11 MLQSLVNEEVIIRLKWDqTEYKGRLVSIDSYMNVQLSGAEEWIDQK-MTSVLGQVLIRCNNVLWIQ 75
                599*************879***************************.***************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       339  (0.0189079); expected 358.6 (0.02)
Passed bias filter:                      245  (0.013665); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.23s 00:00:00.56 Elapsed: 00:00:00.37
# Mc/sec: 727.86
//
Query:       KHJ31460.1  [L=825]
Description: putative protein arginine n-methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-69  233.9   1.2    2.6e-69  233.3   1.2    1.3  1  PRMT5_TIM  PRMT5 TIM barrel domain
    2.9e-69  232.3   0.0    5.7e-69  231.4   0.0    1.5  1  PRMT5      PRMT5 arginine-N-methyltransferase
    4.2e-58  196.1   0.0    6.7e-58  195.5   0.0    1.3  1  PRMT5_C    PRMT5 oligomerisation domain
  ------ inclusion threshold ------
      0.025   14.3   0.0       0.04   13.7   0.0    1.3  1  Met_10     Met-10+ like-protein


Domain annotation for each model (and alignments):
>> PRMT5_TIM  PRMT5 TIM barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.3   1.2   5.7e-73   2.6e-69       1     256 []      98     402 ..      98     402 .. 0.95

  Alignments for each domain:
  == domain 1  score: 233.3 bits;  conditional E-value: 5.7e-73
                 T-SEEEEETT-CCHHT-...................SSSTTCCC--S-SS--CCCS-HHHHHHHEEEE--TT--TT-SSHHHHHHHHHHHHHHHHHHHH CS
   PRMT5_TIM   1 gydfvvlpltnarfkde.................kkdeeadaerrvppltrsdvvlspsdwsqsviglisewidldsedeeirkdsekvLkkelayaay 82 
                 gyd++++p+t+++f+++                 kk ++ +  + + plt +d+ lsp+   ++vi+  s+widl+s+d+ i++ s++vL+ e++ya++
  KHJ31460.1  98 GYDMLTSPITTQHFQERvlalvkthllelsldihKKITKIPSIPIITPLTPADTSLSPEGSISQVIACSSSWIDLCSTDPLISNVSKQVLNIEISYASF 196
                 7*******************************998888889999******************************************************* PP

                 HT-SEEEEE--SS.........--HHHHHHHHHHHCCSSS-EEEEEEESSGGGCTT-STCTTS----S.............CCGHHHHHHHHHHHHTTT CS
   PRMT5_TIM  83 lglralilpgpsl.......reklanyaraissalesanavtisisiplaedkeleeeeetlanaleg.............dllstWelWntirtlcgy 161
                 +g+r++++ gp++       ++ l++y rai++al+  n ++isi ip++ ++  ++   +la   ++             +l+++W++Wn ir++c+y
  KHJ31460.1 197 CGIRHVLITGPKSltigsnsNNVLTEYSRAIQEALTISNFIQISIYIPMYFSEIYQSTPGDLALHARKqytsgklyktnqnELYESWDIWNLIRSVCNY 295
                 *******************9999***************************99855554444444333389***************************** PP

                 -TCEEEECC--CCGTSHHHHCCCCCTTEEEEEEECGG-EESTTT-EE--HHHHHHHHHHHHTT..-EEEEES..........SSTTTTTCCCHCHHHHH CS
   PRMT5_TIM 162 ssrLsVaLeLpkelpskeelerWlaEPvkliilsasiFltnkkgypvLskahqallkeffkln..vkiiLsg..........vekkaksskgdvkaylk 248
                 +srL VaLe+p++lp    + rW+aEP+++++++as+Fl+nk g+pvLsk+hq+l+ ++++l+  ++i+L++          +++ + +s+++  a++ 
  KHJ31460.1 296 NSRLLVALEIPRKLPIGPLQLRWYAEPLRMLCFPASTFLINKGGHPVLSKSHQNLIAQYMRLKlfPWILLCDigplpeleetYSSPELTSSQNTPAHVL 394
                 ***************999*************************************************************9998899999999******* PP

                 HHHHHHHT CS
   PRMT5_TIM 249 yikyllkk 256
                 y+++l+k+
  KHJ31460.1 395 YLRHLQKN 402
                 *****986 PP

>> PRMT5  PRMT5 arginine-N-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.4   0.0   1.3e-72   5.7e-69       4     173 .]     410     604 ..     407     604 .. 0.97

  Alignments for each domain:
  == domain 1  score: 231.4 bits;  conditional E-value: 1.3e-72
                 HHHSCCGBT-EEEE--TTTS---HHHHHHHCC-CCHHHHHHHHHHHHHHHHCTCCGTCC...-EEEEEEES-TTSHHHHHHHHHHHHHCCCEEEEEEEE CS
       PRMT5   4 ekleseyedvlqapLqPlsdnLesatYevFEkdkvKYelYeeAiekalsdlkkekkkks..ekklvilvvGaGRGplvdralkaleetkvtkvkivavE 100
                 e++ s+y+d+lqapLqPl+dnLes+tYevFEkd+vKY+lYe+Ai+ al d+ ke+k +s  + ++vi+v+G+GRGplv+ralka++ ++  +v+i+avE
  KHJ31460.1 410 ESFGSGYQDYLQAPLQPLADNLESITYEVFEKDPVKYDLYEKAIACALIDWSKESKPTSskNGSVVIAVAGSGRGPLVTRALKASQFSG-VSVQIWAVE 507
                 78999**************************************************9988557789************************.9******** PP

                 S-HHHHHHHHHHHHHHTTCCGCEEEES-CCCCCHCC........................-ECEEEE---BTTBCCCSHHHHHHCCGGGCECC.EEEE CS
       PRMT5 101 KnpnavvtLqkkvneekWeekveviksdmrelkaee........................kvdllvsELLGSfgdnELsPEcldgvqkflkee.gisi 173
                 Knpna+v+Lq++ n ekW+  v+++ksdmr++k ++                        kvd+lvsELLGSf+dnELsPEcldgvq++l +e gisi
  KHJ31460.1 508 KNPNAYVLLQRM-NREKWGGVVNIVKSDMRAWKGPIikdlnkiendakyitsnlheisygKVDILVSELLGSFADNELSPECLDGVQHVLVPEyGISI 604
                 *********877.*****************************************************************************99999997 PP

>> PRMT5_C  PRMT5 oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.5   0.0   1.5e-61   6.7e-58       1     177 []     607     825 .]     607     825 .] 0.96

  Alignments for each domain:
  == domain 1  score: 195.5 bits;  conditional E-value: 1.5e-61
                 EEEEEEEEEE-HHHHHHHHT.....-HHHCS-EEEB--S-EESSS......S-EEEEEEESS-TTSS............................-S-E CS
     PRMT5_C   1 sytsyiaPisapklyqklks.....ekaletpyvvklvkvdklse......kvkevweFehpneeke...........................eener 61 
                 syt++++Pi ap+l++++ +     + a++ pyvv+l+++d+l++      +++++weFehp ++++                            +n r
  KHJ31460.1 607 SYTAHLTPILAPRLHAEILQrssvdDMAADIPYVVMLNAIDFLAShapdypRIQKAWEFEHPISHSTitassarrnggvsgggggimsggdganDHNVR 705
                 7******************9877766899*************************************9******************************** PP

                 EEEEEEEE-SSEEEEEEEEEEEEEEET.....TEEEE-SCCC...--TT-TS---EEEEEEEEEEE-TTEEEEEEEEEEEESSEEEEEEEEEECSTTS- CS
     PRMT5_C  62 sktlefkikekaeihGlagyFeavLYk.....dvelSilPetkeaktkdliSWfpiffPlkkpllvkddselevslwRktdekkvWYEWsvesfvylvl 155
                 s++l+f +k+++++hG+agyFeavLY+     +velS++P+t+e k+kd+iSWfpi+fPlk+pl+++ddselevs+wR+td++kvWYEW+ve+fv+++ 
  KHJ31460.1 706 SAHLKFICKDRGVMHGIAGYFEAVLYDcgvdgKVELSTRPDTIEFKSKDMISWFPIYFPLKNPLYFPDDSELEVSIWRQTDDRKVWYEWLVEAFVMVGP 804
                 ***************************777667***************************************************************776 PP

                 E........---BSGGGSS--E CS
     PRMT5_C 156 shvrvkvgvselhnvngraysi 177
                  + r+++ +s+l ++++  +++
  KHJ31460.1 805 -ENRLRLCMSDLSSSRKSGCLM 825
                 .88************9998876 PP

>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   8.9e-06      0.04      99     165 ..     470     540 ..     399     603 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 8.9e-06
                 -TT-EEEETT.-TTTCCHHHCCHHTT....SSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG--- CS
      Met_10  99 eegevVvdvf.AGiGpfaipiakysk....akrvlaidlnPesvkylkeniklNkvekvvkpileDgrevir 165
                 ++g vV+ v   G Gp+   + k s+     ++++a+++nP+++ +l+  +++ k   vv+ +++D r    
  KHJ31460.1 470 KNGSVVIAVAgSGRGPLVTRALKASQfsgvSVQIWAVEKNPNAYVLLQ-RMNREKWGGVVNIVKSDMRAWKG 540
                 556666655323555664444443322212789***********9887.5899*************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (825 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.66u 0.25s 00:00:00.91 Elapsed: 00:00:00.39
# Mc/sec: 6373.61
//
Query:       KHJ31461.1  [L=97]
Description: hypothetical protein EV44_g3519 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 751.24
//
Query:       KHJ31462.1  [L=513]
Description: putative v-type c subunit family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (513 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       756  (0.0421663); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3832.69
//
Query:       KHJ31463.1  [L=1034]
Description: putative phosphatase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-06   27.2   0.0    4.2e-06   26.5   0.0    1.4  1  Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
  ------ inclusion threshold ------
       0.03   14.1   0.3      0.077   12.8   0.3    1.6  1  RhoGAP         RhoGAP domain
       0.21   11.5   1.6         22    5.0   0.0    2.6  2  UCH_C          Ubiquitin carboxyl-terminal hydrolases


Domain annotation for each model (and alignments):
>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0     7e-10   4.2e-06      32     206 ..      89     448 ..      44     456 .. 0.73

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 7e-10
                    S...................................EEEEEEEBSCTCHHHHHHHHHTTCEEEEECCH............................ CS
                    x...................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................ RF
  Exo_endo_phos  32 D...................................vlgLQEvdddelsriplllalggflgasstsp............................ 64 
                                                        vlgLQEv   + +r   + ++        t+p                            
     KHJ31463.1  89 SatesklqldkikdleasngddclseiedqeevgiyVLGLQEVTSLSTAREYIGRIY--------TDPepisrwrkalvealpsgyveimeqqlag 176
                    044444444444444444444455555555555555******777776665444443........3333456666666777777778888888888 PP

                    ........................ECSSSTTSSEEEEEECSTE...EEEEEEEEEETSSSSGCEEEEEEEEEEEEEEECCCHHGHHHHHHHHHHHH CS
                    ........................xxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  65 ........................tgggggggnggavlsrfpl...tslfrrtfiefndlvaalrreplaakleqlniashrdhdlvrdlqllall 133
                                            tg+ g+ gn+ga++ r  l   t++                                               
     KHJ31463.1 177 lllfiyaspsiapkinsvstvtigTGIIGYLGNKGAIVTRIILadtTRI----------------------------------------------- 225
                    8888888889999999***************************988888............................................... PP

                    HHHHHHHHHTTSEEEE.....................................................EEE-SSSTSGGGBSCGHHHHHHCTTTH CS
                    xxxxxxxxxxxxxxxx.....................................................xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 134 lqvealnadrgapviv.....................................................aGDfNarpsdddsrvlrtrglalapap 176
                                 v+v                                                     +GD+N+                     
     KHJ31463.1 226 -------------VFVnshlasgpepqqlerrfwdieqilqrtkfepinstecftnnqdqigdeeytfwFGDLNF--------------------- 287
                    .............888999999999999999999999999999999999999999********************..................... PP

                    HSSCESCETTTTTTTTTTTEB-B......................................................................... CS
                    xxxxxxxxxxxxxxxxxxxxxxx......................................................................... RF
  Exo_endo_phos 177 vglyllgggptptyvtraggsrl......................................................................... 199
                                         rl                                                                         
     KHJ31463.1 288 ---------------------RLdglpgdeirrllmimsneecrngpqpqnlldddvkedetfiihgdsddendeetgyqheskaddfklanilsp 362
                    .....................665555555555588888888888888888888888888888888888888888888888888888888888888 PP

                    ...............................................................................EEEEEEC CS
                    ...............................................................................xxxxxxx RF
  Exo_endo_phos 200 ...............................................................................Drilasp 206
                                                                                                   Dril+++
     KHJ31463.1 363 nfqhldafafdssqdpaslqstlncllphdqlknaqannrilhdgwkegpisflptykydigaemifdssekkrapswcDRILYRS 448
                    88888888888888888888888888888888888888888888888888888888888888888888888888888888888885 PP

>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3   1.3e-05     0.077      32     127 ..     828     929 ..     813     962 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.3e-05
                 HHHHHHHHHTGGGCT.....TTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHH..HHTSSSHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHH CS
      RhoGAP  32 kelreafdkgkavds.....dleeedvhavaslLKrfLrelpepLltkelyeelie..aaksedeeerlealkellekLPkenrdtLryLlehLkrvae 123
                 + + +a+d+ ++ ++      l  e++++++++L +fL+ l + ++t++l  +l +  a +  ++ee +    ++l+  P++n + + +L ++L +v +
  KHJ31463.1 828 QLVIQALDTSQNLTEvftpeTLAIEKLEVISEALLLFLSYLSDGIITHNLWLSLEQafADRGPSPEEIKAWTLDILSAEPNHNIS-FIFLTSMLAQVVA 925
                 444677888888777888878888999****************************744444466777666666777777776665.5577777777665 PP

                 THHH CS
      RhoGAP 124 nske 127
                   ++
  KHJ31463.1 926 ELAS 929
                 3333 PP

>> UCH_C  Ubiquitin carboxyl-terminal hydrolases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.5    0.0043        26       3      25 ..     557     578 ..     555     579 .. 0.93
   2 ?    5.0   0.0    0.0037        22      18      39 ..     815     836 ..     812     839 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0043
       UCH_C   3 eleakLeeEeeKrerwkeENaRR 25 
                 e++ak+++E  + +  + EN+RR
  KHJ31463.1 557 EVKAKIQQEVVR-DLDRAENERR 578
                 789********9.*********9 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0037
       UCH_C  18 wkeENaRRrHNYlPFIvelLka 39 
                 w   N+ Rr NYl+++++ L +
  KHJ31463.1 815 WIFKNSTRRDNYLQLVIQALDT 836
                 5566999***********9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1034 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       756  (0.0421663); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.42
# Mc/sec: 7394.21
//
Query:       KHJ31464.1  [L=180]
Description: putative dcp1 superfamily decapping enzyme [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.1e-24   83.6   0.0    1.1e-23   83.4   0.0    1.1  1  DCP1      Dcp1-like decapping family
  ------ inclusion threshold ------
       0.17   11.9   0.0       0.28   11.2   0.0    1.3  1  HTH_45    Winged helix-turn-helix


Domain annotation for each model (and alignments):
>> DCP1  Dcp1-like decapping family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.4   0.0   1.2e-27   1.1e-23       2     116 ..      10     133 ..       9     134 .. 0.90

  Alignments for each domain:
  == domain 1  score: 83.4 bits;  conditional E-value: 1.2e-27
                 HHHHHHHHHHH-TTEEEEEEEEEEEEEEEEETT....TTEEEEEEEEEEEEEEEE.TT.S-EEEEEEESSSS--EEEEESSGGGEEEETTEEEEEETTT CS
        DCP1   2 kelnlrvLqrldpsiesildtashvvlYkfnes....sqeWektdieGtLfvvkr.skepryglivlNrkslenliedltkelelelqgeyliyrteee 95 
                  e+n++vL+r+ ps+++i+++a+++++Y++ ++      eW+++dieGtLfv++     ++++l+vlNrk+ +nli ++ + +++e+ +e+li+r +++
  KHJ31464.1  10 AEMNFSVLRRYVPSLRDIIAIAASASIYTLTPDnsetGAEWKRADIEGTLFVCELgYGPDQHCLVVLNRKGRDNLIIQFGEIVDVEVTNEFLILRFSSN 108
                 589***************************9986666789***************434589***********************************999 PP

                 ...EEEEEEESSHH.HHHHHHHHHH CS
        DCP1  96 ...evfgiWfyeee.dreriasllk 116
                    ++ g++++++   re+i++l+k
  KHJ31464.1 109 geaRILGFFIQCSGcSREEICELIK 133
                 999*****99987426778887765 PP

>> HTH_45  Winged helix-turn-helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.1e-05      0.28      28      61 ..       9      42 ..       6      54 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.1e-05
      HTH_45 28 kanLsykllnkYLdmLvekglikkskekYvlTek 61
                +a++++++l++Y+  L +   i  s + Y+lT  
  KHJ31464.1  9 HAEMNFSVLRRYVPSLRDIIAIAASASIYTLTPD 42
                699*****************************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1439.72
//
Query:       KHJ31465.1  [L=370]
Description: hypothetical protein EV44_g5443 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       641  (0.0357521); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2756.86
//
Query:       KHJ31466.1  [L=284]
Description: putative aldo-keto reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.9e-44  151.4   0.1    5.1e-42  144.1   0.1    2.0  1  Aldo_ket_red  Aldo/keto reductase family
  ------ inclusion threshold ------
       0.15   11.4   0.1        2.3    7.7   0.0    2.4  2  P3A           Poliovirus 3A protein like


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.1   0.1   5.7e-46   5.1e-42      27     293 ..      42     269 ..      23     270 .. 0.94

  Alignments for each domain:
  == domain 1  score: 144.1 bits;  conditional E-value: 5.7e-46
                   HHHTT--EEE--TT-TTTHHHHHHHHHHHH-TTTGGG-EEEEEE--SSSTTSSSS-HHHHHHHHHHHHHHHT-S-EEEEEE-S--TTS-.HHHHHHH CS
  Aldo_ket_red  27 aleaGinffDtAevYgkgqseellGealkksrkkreeviiatKvdlrdaeiksglskeniresleeslkrLgtdyvDllllHrpdpslpsieevlda 123
                   al+aG++++DtA++Y   ++e+++Gea+ +s+ kr ev+i+tK+    ++ +++ + +  +es++++  + g  yvDl+l+H  +  ++++ e + a
    KHJ31466.1  42 ALKAGYRHIDTAQFY---KNEIEVGEAVRRSGLKRSEVFITTKI--LSSAGSVHATYAKAIESVNRIDGENG--YVDLFLVHTSTGGSKDRKEMYLA 131
                   89*************...**************************..99999999999999999999999888..*********************** PP

                   HHHHHHTTSEEEEEEES--HHHHHHH.HHTTT--EEEEE-B-BTT-HHHHTTHHHHHHHTT-EEEEBSTTGGGTTGTTTSS---SSSCCC------- CS
  Aldo_ket_red 124 leelvkeGkiraiGvSnfsveqleka.kkkkkvkivavqveynllreleeegllelckkkgvpliaysplggGlltgkyqseedkedkeprkdlkrd 219
                   le++ + Gk+++iGvSn+ ++++e++    +++++ ++q+e +++   ++++++e+c+k+++ l ay+pl + l +                     
    KHJ31466.1 132 LEKVLELGKAKSIGVSNWGIGHIEELkGLARVYPPHVNQIELHPF--CQQREIVEFCEKNKIVLEAYCPLVRNL-K--------------------- 204
                   **************************88999**************..***********************9433.3..................... PP

                   TS-HHHHHHHHHHHHHHHHTT--HHHHHHHHHTTSTT-SEEEE--SSHHHHHHHHGGGG----HHHHHHHHHHH CS
  Aldo_ket_red 220 ertsknldaaeelselakehgvslaqlalryalsqpavgivipgasnieqlednldalelklseeevaeldell 293
                           ++++l ++a+ h++s++q+ +ry l  +++ +++p++ +++++e+n++++++ l++ee+++ld l+
    KHJ31466.1 205 -------AKDPTLLSIAEAHSKSVSQVLIRYSL--QKNWVPLPKSDTPHRIEENIKVYDFHLTNEEMERLDTLD 269
                   .......57899*********************..9**********************************9875 PP

>> P3A  Poliovirus 3A protein like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0   0.00026       2.3      29      56 ..     178     203 ..     159     206 .. 0.81
   2 ?    0.9   0.0     0.032   2.9e+02      30      44 ..     222     236 ..     212     251 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00026
                 --HHHHHHHHHHT--TT-SSS--SSSS- CS
         P3A  29 dsqEvrdYCekkgWivnitsevsiERdl 56 
                 + +E++++Cek+  iv + + +   R+l
  KHJ31466.1 178 QQREIVEFCEKNK-IV-LEAYCPLVRNL 203
                 678******9876.66.69999999998 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.032
                 -HHHHHHHHHHT--T CS
         P3A  30 sqEvrdYCekkgWiv 44 
                 sq ++ Y  +k+W+ 
  KHJ31466.1 222 SQVLIRYSLQKNWVP 236
                 788999*******85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       390  (0.0217525); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2069.59
//
Query:       KHJ31467.1  [L=200]
Description: hypothetical protein EV44_g3569 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.17   12.1   0.0       0.25   11.5   0.0    1.3  1  HemY_N    HemY protein N-terminus


Domain annotation for each model (and alignments):
>> HemY_N  HemY protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   1.4e-05      0.25       5      90 ..      17     104 ..      14     114 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 1.4e-05
      HemY_N   5 iawggyrietslvvavlllvllfvlly.lllrllrlllrlparvr.rwrrrrrerkarealseGlialaeGdfarAekaaakaaklse 90 
                 + +gg    t lv+av+ ++ll++ l+ l++rl++ + ++ +  +  w  r    k  + l+ G+  ++  + ++Aek  +k +k+ e
  KHJ31467.1  17 LIIGGQGGRTGLVFAVIGIFLLILSLFvLVVRLVAIFTNSAHLGNiGWGFRPDLCKDLHDLEMGWDMIETTELSEAEKVVQKVRKRRE 104
                 6667777789999999988888776551566666666666655557888888889999999999999999999999998888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1031  (0.0575046); expected 358.6 (0.02)
Passed bias filter:                      738  (0.0411624); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 1520.80
//
Query:       KHJ31468.1  [L=376]
Description: hypothetical protein EV44_g3488 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.06   13.4   0.1       0.13   12.4   0.1    1.6  1  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   7.2e-06      0.13       9      17 ..     332     340 ..     330     341 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.2e-06
                 SSSTTTTST CS
     zf-CCHC   9 pGHiardCp 17 
                  GH+a+dC+
  KHJ31468.1 332 KGHWAKDCT 340
                 6*******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       523  (0.0291706); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 3029.65
//
Query:       KHJ31469.1  [L=188]
Description: hypothetical protein EV44_g3395 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.069   12.6   1.9      0.098   12.1   1.9    1.3  1  tRNA_synthFbeta  Phenylalanyl tRNA synthetase beta chain CLM 
       0.12   12.0   6.8       0.14   11.8   6.8    1.1  1  CCDC84           Coiled coil protein 84
        3.8    8.7  11.0         16    6.7  11.1    2.1  1  CK1gamma_C       Casein kinase 1 gamma C terminal


Domain annotation for each model (and alignments):
>> tRNA_synthFbeta  Phenylalanyl tRNA synthetase beta chain CLM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.9   1.6e-05     0.098      21      95 ..      56     133 ..      38     145 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.6e-05
  tRNA_synthFbeta  21 lrrklrdllagaGlnEvitysfvsekeldkll...eddderkavelanPlsedqsvlRtsLlpglLevlarNlargne 95 
                       + ++ ++ a++   E it s+ s ++  ++    ++++e k ++ +  l+  ++++ tsL  ++Le+l++N + +++
       KHJ31469.1  56 KKVQIDQTKASQKIAENITESLLSLSRQFEASkqkSKKSEVKQLKAEKRLNLRLEIMQTSLSKQILEALSSNSNTSER 133
                      556778888999999*********9999999887666789999999**************************998765 PP

>> CCDC84  Coiled coil protein 84
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   6.8   2.3e-05      0.14     114     215 ..      31     149 ..       9     184 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.3e-05
      CCDC84 114 eedvekfkkkvekdlesteekedefekeeaasiketesnrvevlqslleeeaqises...lgsl................aelletrkqqsalleslke 193
                  e+ ek  k++++ ++s+++++d+f+k ++++ k++++   ++  sll  ++q + s   +                    e ++t+ ++++l    ++
  KHJ31469.1  31 LEESEKGSKEIKDSVKSNQDNLDSFKKVQIDQTKASQKIAENITESLLSLSRQFEASkqkS--KksevkqlkaekrlnlrLEIMQTSLSKQILEALSSN 127
                 3567788999999**********************99999999999988888877664331..233444444444444443333444444444444443 PP

      CCDC84 194 saskkstleestsvlqnpkgsh 215
                 s++++ t+ e +++++++++ +
  KHJ31469.1 128 SNTSERTARELVRTSHDESRFR 149
                 4444444444444444433333 PP

>> CK1gamma_C  Casein kinase 1 gamma C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7  11.1    0.0027        16      13      91 ..      74     174 ..      21     180 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0027
  CK1gamma_C  13 qetivspnRerhastak..........................asklkepmsvsqqsskerssawvealkanaellgnalaadrhggsvQvvSStngeL 85 
                  e+ +s +R+  as++k                           ++  e++s + + s++ + + v++ + +++ + + l+ ++hggs    SStn  L
  KHJ31469.1  74 TESLLSLSRQFEASKQKskksevkqlkaekrlnlrleimqtslSKQILEALSSNSNTSERTARELVRTSHDESRFRRSSLPPSKHGGS----SSTNTSL 168
                 5777888888888888788899999999999999999997655444445555555566666666668888888899999********9....9****** PP

  CK1gamma_C  86 ntddpt 91 
                 +  dp 
  KHJ31469.1 169 QLADPQ 174
                 966663 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2796  (0.155948); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.36
# Mc/sec: 1546.01
//
Query:       KHJ31470.1  [L=386]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1010  (0.0563333); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2804.59
//
Query:       KHJ31471.1  [L=550]
Description: putative transcription factor cys6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-07   30.6   0.0    2.9e-07   29.6   0.0    1.6  1  Fungal_trans_2  Fungal specific transcription factor domain
    3.9e-07   30.1  13.5    1.2e-06   28.5  13.5    1.8  1  Zn_clus         Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
       0.12   11.5   0.0       0.28   10.3   0.0    1.5  1  Mg_trans_NIPA   Magnesium transporter NIPA
       0.16   11.6   0.4       0.59    9.8   0.1    2.0  2  UTP15_C         UTP15 C terminal
       0.65   10.5   6.3        2.8    8.5   5.6    2.6  2  Prot_inhib_II   Potato type II proteinase inhibitor family


Domain annotation for each model (and alignments):
>> Fungal_trans_2  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.0   8.1e-11   2.9e-07      49     131 ..     161     239 ..     130     388 .. 0.88

  Alignments for each domain:
  == domain 1  score: 29.6 bits;  conditional E-value: 8.1e-11
  Fungal_trans_2  49 hlqskgpkdslereakrykslalkelqealaelsstlsrnekykdiLaaiLllcsie....issgdvsdwrvhLeaatsliksrggs 131
                     h+  ++ ++ + ++a++ +++al++ ++al+++   ++     +++++ i++l ++e      sg+ sdw  h+++a +lik+rg+ 
      KHJ31471.1 161 HR--LNAPS-MIQRARHQYVQALQLTNKALQDPVDVKK-----NSTIVGIIVLGIYEtiigKKSGSHSDWIHHFNGAVALIKMRGPE 239
                     33..22333.478999**********************.....**************543333555777****************98 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5  13.5   3.3e-10   1.2e-06       1      34 [.       9      42 ..       9      44 .. 0.93

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 3.3e-10
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCC CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfys 34
                ++C  Cr++K++Cd+ kP C++Ck+ n eC  y+
  KHJ31471.1  9 KSCHACRQRKTRCDQLKPGCTQCKRANRECPGYR 42
                59****************************8765 PP

>> Mg_trans_NIPA  Magnesium transporter NIPA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   7.8e-05      0.28      37      75 ..     445     483 ..     426     489 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 7.8e-05
  Mg_trans_NIPA  37 vrageGGyaylkevlWwaGlltmavGeaanfaayafaPa 75 
                     r    G  yl  +lW+a ll  ++ e+ +fa y +  +
     KHJ31471.1 445 FRVPMSGTWYLCRPLWLAALLHNSTQEIKDFAVYNLRNI 483
                    566678999*************************87655 PP

>> UTP15_C  UTP15 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.54   1.9e+03      70     113 ..     171     215 ..     167     227 .. 0.71
   2 ?    9.8   0.1   0.00016      0.59      76     112 ..     386     422 ..     375     434 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.54
     UTP15_C  70 rdeeslepiLkfllkhitdpryvs.llvdvanvlldlyseklgqs 113
                 r  ++ ++ L+ ++k ++dp  v+   + v  ++l +y+  +g++
  KHJ31471.1 171 RARHQYVQALQLTNKALQDPVDVKkNSTIVGIIVLGIYETIIGKK 215
                 566677778888888888776554145566678889999888665 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00016
     UTP15_C  76 epiLkfllkhitdpryvsllvdvanvlldlyseklgq 112
                   +L+ l+k  ++pry++ +++v ++l+dl ++ l +
  KHJ31471.1 386 YDVLNRLIKEYNHPRYICQVTKVSHTLFDLQHDILYS 422
                 579999***********************98776655 PP

>> Prot_inhib_II  Potato type II proteinase inhibitor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   5.6   0.00078       2.8      20      48 ..      20      48 ..       6      50 .. 0.81
   2 ?   -3.8   0.0         5   1.8e+04      11      19 ..     154     162 ..     152     165 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00078
  Prot_inhib_II 20 gskklkqiCtnCcagkkgCklyskdGtli 48
                      +lk+ Ct C+ ++++C  y+ +G+++
     KHJ31471.1 20 RCDQLKPGCTQCKRANRECPGYRVEGEIV 48
                   345789******************99976 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 5
  Prot_inhib_II  11 iaymiCpss 19 
                    + y +C + 
     KHJ31471.1 154 VGYAVCAHR 162
                    789999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (550 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       643  (0.0358637); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3845.30
//
Query:       KHJ31472.1  [L=359]
Description: putative woronin body major protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2656.19
//
Query:       KHJ31473.1  [L=536]
Description: putative adhesin protein mad1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-06   27.0   2.9    8.6e-06   25.8   2.9    1.6  1  CFEM            CFEM domain
     0.0047   15.4  12.6     0.0062   15.0  12.6    1.1  1  Mpp10           Mpp10 protein
     0.0056   16.2  13.5     0.0077   15.7  13.5    1.1  1  SDA1            SDA1
     0.0066   16.5   8.9      0.013   15.6   8.9    1.4  1  RXT2_N          RXT2-like, N-terminal
  ------ inclusion threshold ------
      0.046   13.6   5.1       0.08   12.8   5.1    1.3  1  TLP-20          Nucleopolyhedrovirus telokin-like protein-20 
      0.055   13.4   6.3      0.071   13.0   5.4    1.6  1  RPN2_C          26S proteasome regulatory subunit RPN2 C-term
      0.057   12.7  20.6       0.11   11.8  20.6    1.4  1  NOA36           NOA36 protein
      0.085   11.7   7.8       0.12   11.3   7.8    1.1  1  HSP90           Hsp90 protein
      0.096   10.9  17.6       0.13   10.4  17.6    1.1  1  Nop14           Nop14-like family
       0.13   11.4  26.6        0.2   10.8  26.6    1.2  1  DUF2457         Protein of unknown function (DUF2457)
       0.24   11.3  15.2       0.35   10.7  15.2    1.2  1  Sigma70_ner     Sigma-70, non-essential region
        0.3   11.3   3.8       0.47   10.6   3.8    1.2  1  CPSF100_C       Cleavage and polyadenylation factor 2 C-termi
       0.44   10.3  11.2        0.8    9.5  11.2    1.4  1  Pox_Ag35        Pox virus Ag35 surface protein
       0.66    9.9   5.2        1.1    9.2   5.2    1.3  1  Trypan_PARP     Procyclic acidic repetitive protein (PARP)
       0.72    9.4  15.3        1.2    8.6  15.3    1.3  1  PPP4R2          PPP4R2
       0.83    9.1  23.2        1.3    8.5  23.2    1.2  1  Osteopontin     Osteopontin
        1.2    8.3   4.6        1.5    8.0   3.7    1.7  2  Med13_C         Mediator complex subunit 13 C-terminal domain
        1.4    7.8  10.7        1.9    7.3  10.7    1.2  1  DUF2722         Protein of unknown function (DUF2722)
        1.7    7.5   4.4        2.4    7.0   4.4    1.1  1  DUF913          Domain of Unknown Function (DUF913)
        1.7    8.4   9.4        2.5    7.9   9.4    1.2  1  XAP5            XAP5, circadian clock regulator
        1.8    6.6  29.3        2.5    6.1  29.3    1.1  1  DNA_pol_phi     DNA polymerase phi
          2    7.7  15.6        2.7    7.2  15.6    1.1  1  BUD22           BUD22
        2.6    8.3   9.9        4.4    7.6   9.9    1.3  1  Vfa1            AAA-ATPase Vps4-associated protein 1
        3.2    8.5  21.7        5.8    7.7  21.7    1.3  1  FYDLN_acid      Protein of unknown function (FYDLN_acid)
        3.2    6.0   8.4        4.4    5.5   8.4    1.1  1  eIF-3c_N        Eukaryotic translation initiation factor 3 su
        3.5    6.9  16.7        5.1    6.4  16.7    1.1  1  CobT            Cobalamin biosynthesis protein CobT
        3.5    6.8  12.0        5.4    6.1  12.0    1.2  1  TRAP_alpha      Translocon-associated protein (TRAP), alpha s
        3.6    6.5  12.8        5.3    6.0  12.8    1.1  1  Pes-10          Pes-10
        5.3    6.8   9.1         10    5.9   9.1    1.4  1  Tom22           Mitochondrial import receptor subunit Tom22
        5.5    5.4  17.8        7.9    4.9  17.8    1.1  1  RRN3            RNA polymerase I specific transcription initi
        6.6    6.4  23.4        9.9    5.8  23.4    1.2  1  Cwf_Cwc_15      Cwf15/Cwc15 cell cycle control protein
        6.8    4.9  20.4         12    4.1  20.4    1.3  1  CDC45           CDC45-like protein
        9.3    5.1  13.6         15    4.4  13.6    1.2  1  IFT57           Intra-flagellar transport protein 57


Domain annotation for each model (and alignments):
>> CFEM  CFEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   2.9   1.6e-08   8.6e-06       6      65 ..     329     389 ..     325     390 .. 0.86

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 1.6e-08
                 -GGGTCGGG---TTSS..S-.TT-HHHHHH-HHHHHHHHHHHHHH--TH.HHHHHHHHHHHHH CS
        CFEM   6 PkCaqdClaeavkkss.gCa.kddtaCiCtnaklqseitdCvtaaCtae.ealaavnaasslC 65 
                 P  + +Cl++     s gC+ ++d+aC+C ++k+ s+i +C++a+ + e e+ +a+++ + +C
  KHJ31473.1 329 PGILPACLNTWK--YSiGCSsNTDVACFCPSSKFSSSIYSCIEAHAKFElEVRVAKQYYQGIC 389
                 667789999988..4448**9************************995537779999999999 PP

>> Mpp10  Mpp10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0  12.6   1.1e-05    0.0062     250     301 ..     237     285 ..     204     298 .. 0.49

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.1e-05
       Mpp10 250 kkkkdeeeadeeeedeeeeeeeeeeeeeeeeeedleeedeeeeeeeeeedee 301
                 kkk++ +++d+++e eeeeee++++++++++++d+e++d+  e++++ee+++
  KHJ31473.1 237 KKKDNYHDDDDDDE-EEEEEEDDDDDDDDDDDDDVENDDD--EKNKKEESKK 285
                 22222221111111.1111233333333333333322222..2222222222 PP

>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7  13.5   1.4e-05    0.0077     127     175 ..     238     283 ..     220     319 .. 0.51

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.4e-05
        SDA1 127 eeeieesdesedeeeeeeeeeekeekeeeeeeeeeeeeeeeeeeeeeek 175
                 ++++  +d+++deeeeeee+++++++++++++   e++++e++++e e+
  KHJ31473.1 238 KKDNYHDDDDDDEEEEEEEDDDDDDDDDDDDDV--ENDDDEKNKKE-ES 283
                 222222222222222222222222222111111..11111111111.11 PP

>> RXT2_N  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   8.9   2.3e-05     0.013      48     101 ..     238     292 ..     208     304 .. 0.65

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2.3e-05
      RXT2_N  48 erskrkkkekekeekeeeeedeegdeededdddee.eaeaaeenpykkvrleelL 101
                 ++++++++++++ee+eeee+d+++d++d+ddd e+ ++e+++++ +kk ++ e+L
  KHJ31473.1 238 KKDNYHDDDDDDEEEEEEEDDDDDDDDDDDDDVENdDDEKNKKEESKKTKIIEIL 292
                 3333344444444444444444444444344433368888888899999999998 PP

>> TLP-20  Nucleopolyhedrovirus telokin-like protein-20 (TLP20)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   5.1   0.00015      0.08      84     162 ..     206     287 ..     164     290 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00015
      TLP-20  84 nviLfnikptvlkkgsviFkivytnkksansklflsapv.....eksssededdeddededeaakiesnsdseesepssaKkqk 162
                 ++iL+  ++t+ +  ++  +i     ++  +k++ + +      +++++e+edd+dd+d+d+++++e++ d+e++++  +Kk k
  KHJ31473.1 206 SAILISSTSTISTVTATATQIGTLPISNVGKKKKDN-YHdddddDEEEEEEEDDDDDDDDDDDDDVEND-DDEKNKKEESKKTK 287
                 566777666666666666666555523333333333.33244444445555555555566666677777.44444455555544 PP

>> RPN2_C  26S proteasome regulatory subunit RPN2 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   5.4   0.00013     0.071      47     110 ..     230     287 ..     196     296 .. 0.46

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00013
                 HHHHHHHHHHHHHHHHHHG.----------------------------------SS----SSEE CS
      RPN2_C  47 vLSttakakarakkkekekeeeekeedkmdvdeekeekekkekekkekekeeekkkkekektfe 110
                  +S   k+k+ + +++++ +eee+ee++ d d++++++++ e++++      ek+kke++k+++
  KHJ31473.1 230 PISNVGKKKKDNYHDDDDDDEEEEEEEDDDDDDDDDDDDDVENDDD------EKNKKEESKKTK 287
                 4444444444444444333222222222222222222222222222......333333333333 PP

>> NOA36  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8  20.6    0.0002      0.11     267     304 ..     237     274 ..     205     286 .. 0.56

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.0002
       NOA36 267 ddeddegdedddddddeedddeeeddedeeeeeeeese 304
                 +++d++ d+dddd+++ee++d+++dd+d+++++ e+++
  KHJ31473.1 237 KKKDNYHDDDDDDEEEEEEEDDDDDDDDDDDDDVENDD 274
                 44555555555554444444333333333333322222 PP

>> HSP90  Hsp90 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   7.8   0.00022      0.12      28      72 ..     236     287 ..     212     312 .. 0.52

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00022
                 EEEXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXX..XXXXXXXX CS
       HSP90  28 ekeeekeveeeeeeeeeeeee.......eeeeakveeeeeeeeekkktkkvk 72 
                 +k++++  ++++++eeeeeee       ++++++ve++++e+++k+++kk+k
  KHJ31473.1 236 KKKKDNYHDDDDDDEEEEEEEdddddddDDDDDDVENDDDEKNKKEESKKTK 287
                 4444433332222222222221233444556666666555555544444433 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4  17.6   0.00024      0.13     366     409 ..     238     282 ..     216     299 .. 0.41

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00024
       Nop14 366 seeee.eeeeedeeeeedeeeeeeeeededdlsdleseeeeeede 409
                 ++++  +++++deeeee+e++++++++d+dd+ +++++e+++++e
  KHJ31473.1 238 KKDNYhDDDDDDEEEEEEEDDDDDDDDDDDDDVENDDDEKNKKEE 282
                 222221222222222222222221111111111111111111111 PP

>> DUF2457  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8  26.6   0.00036       0.2      49      93 ..     241     282 ..     213     290 .. 0.47

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00036
     DUF2457  49 Eaeeeeeeeeddeedeeddddddddedddedddeedededddstv 93 
                   ++++   +ddee+ee++dddddd+ddd+dd e+d+de++++++
  KHJ31473.1 241 NYHDDD---DDDEEEEEEEDDDDDDDDDDDDDVENDDDEKNKKEE 282
                 222222...222222222233333333333333333333222221 PP

>> Sigma70_ner  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7  15.2   0.00064      0.35      31      74 ..     244     289 ..     213     296 .. 0.57

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00064
  Sigma70_ner  31 Deeeeeeeeeeeedeeeeeeeeddd..eeeseseaadeeelkeeal 74 
                  D+++++eeeeeeed++++++++ddd  e+++++++++ee  k +++
   KHJ31473.1 244 DDDDDDEEEEEEEDDDDDDDDDDDDdvENDDDEKNKKEESKKTKII 289
                  3333333333333333333332222344455555555555555555 PP

>> CPSF100_C  Cleavage and polyadenylation factor 2 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   3.8   0.00087      0.47      34      92 ..     235     294 ..     211     314 .. 0.44

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00087
   CPSF100_C  34 a.......eeaeeeekeeeeeeeeeeeeeeeaskkqklaeksekeaseeeseekkeslptldvlpa 92 
                         +     +++ ++eeeeeee++++ +++   +++ e++++e++++e++++++++++lp+
  KHJ31473.1 235 GkkkkdnyH-----DDDDDDEEEEEEEDDDDDDDDD-DDDDVENDDDEKNKKEESKKTKIIEILPE 294
                 133222221.....1111111111111111111111.12334445555555556666666666664 PP

>> Pox_Ag35  Pox virus Ag35 surface protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5  11.2    0.0015       0.8      62     113 ..     238     284 ..     209     296 .. 0.49

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0015
    Pox_Ag35  62 kkpakkekkkkeeekeeaaeeeeledseedeenendedeseesvqaeeeksn 113
                 kk    ++ + ++  +e++eeee +d+++d+++++d+++ +++++++ee s+
  KHJ31473.1 238 KK----DNYHDDDDDDEEEEEEEDDDDDDDDDDDDDVENDDDEKNKKEE-SK 284
                 11....1222222222333333333333333333333333333332222.22 PP

>> Trypan_PARP  Procyclic acidic repetitive protein (PARP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   5.2    0.0021       1.1      11     109 ..     208     305 ..     205     319 .. 0.45

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0021
  Trypan_PARP  11 illfsanlfagvgfaaaaegpedkgltkggkgkekgtkvsdddtngtdpepepepepepepepepepep...etepeeepepepepepepepepepep 105
                  il+ s+  ++ v   a+a +     +   gk k    + +ddd +  + e e +++ + + + + + e+   e++ +ee+++    e  pe    p p
   KHJ31473.1 208 ILISSTSTISTVT--ATATQIGTLPISNVGKKK--KDNYHDDDDDDEEEEEEEDDDDDDDDDDDDDVENdddEKNKKEESKKTKIIEILPEVSLVPIP 301
                  5555555555554..334444445566666654..444444444444333333333333333333333311123333333333334444444444444 PP

  Trypan_PARP 106 epep 109
                  +p p
   KHJ31473.1 302 KPIP 305
                  4444 PP

>> PPP4R2  PPP4R2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6  15.3    0.0022       1.2     236     282 ..     238     278 ..     190     287 .. 0.50

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0022
      PPP4R2 236 eeiteekdesvkveekdddeeddeedtdyveeeeddesedddeeeee 282
                 +++  + d++++ ee +++e+dd++d+     ++dd++ ++d++e++
  KHJ31473.1 238 KKDNYHDDDDDDEEE-EEEEDDDDDDD-----DDDDDDVENDDDEKN 278
                 222222222222222.11111111111.....112222222222222 PP

>> Osteopontin  Osteopontin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5  23.2    0.0024       1.3      27     107 ..     202     284 ..     196     296 .. 0.65

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0024
                  S---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXX.XXXXXXXXXXX CS
  Osteopontin  27 DpsqkqnlLapqnavsseetddlkqetlpsksneshdhvDdvDddddddhvdsq..dsvdsddsdetddsdk.sdeshhsDesD 107
                  +p++   l++   ++s+   +  +  tlp  sn  + + D+  dddddd+++++  d  d dd+d+ dd ++  de ++ +es 
   KHJ31473.1 202 NPANSAILISSTSTISTVTATATQIGTLP-ISNVGKKKKDNYHDDDDDDEEEEEeeDDDDDDDDDDDDDVENdDDEKNKKEESK 284
                  56667778888899999999999999**9.577777777776555555554444004444444444555554145666677775 PP

>> Med13_C  Mediator complex subunit 13 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0         4   2.2e+03     126     186 ..     117     180 ..      97     189 .. 0.58
   2 ?    8.0   3.7    0.0028       1.5     162     224 ..     211     276 ..     195     327 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 4
     Med13_C 126 lqkpsilsacLvsvepdpsLrlmpdavtpdsrfgqsss....stplstPqdsscthilvfptsat 186
                 + ++ +++  +vsve d +L+++ + +  +s+ +q+ +     + +   q   +t+++v  +++t
  KHJ31473.1 117 EVSSFSITKIFVSVEFDCDLEFHYA-MLDNSVCKQRVAcskdGSIIENTQCGGATSVTVLYPKQT 180
                 4445666777899999999999854.333344443333444433333345556666666666665 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0028
     Med13_C 162 ssstplstPqdsscthilvfptsattqstpttfasedanaedt.....pedsseed.....dsdallvdltde 224
                 ss++++st   +++t+i + p s+ ++ ++ +++++d+++e++     +     +d     d+d   +d +de
  KHJ31473.1 211 SSTSTIST-VTATATQIGTLPISNVGKKKKDNYHDDDDDDEEEeeeedD-----DDdddddDDDDVEND-DDE 276
                 34777788.56779***********************999988665421.....222233222222222.222 PP

>> DUF2722  Protein of unknown function (DUF2722)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3  10.7    0.0035       1.9     382     433 ..     233     284 ..     209     324 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0035
     DUF2722 382 kfensaiasqekeddddddddekerkkeeekdkekdsikadddkdlsmdssi 433
                 ++ ++++ + + +dddd++++e+e++ ++++d  +d++++ddd+  ++++s+
  KHJ31473.1 233 NVGKKKKDNYHDDDDDDEEEEEEEDDDDDDDDDDDDDVENDDDEKNKKEESK 284
                 3333444444444444444444555555555555555655555555554444 PP

>> DUF913  Domain of Unknown Function (DUF913)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.4    0.0045       2.4     270     324 ..     235     289 ..     199     298 .. 0.43

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0045
      DUF913 270 skseasssssssetkeeekssededvemedaeeetesesdeseeseeekeknsll 324
                  k+++++ + +++++eee+++ed+d++++d ++++ +++d++++++ee++k++++
  KHJ31473.1 235 GKKKKDNYHDDDDDDEEEEEEEDDDDDDDDDDDDDVENDDDEKNKKEESKKTKII 289
                 2223333333333333333222222222222122222223333333334444444 PP

>> XAP5  XAP5, circadian clock regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   9.4    0.0046       2.5       9      68 ..     239     299 ..     232     314 .. 0.43

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0046
        XAP5   9 kLSFgdddeeeeeeeekakkkeeeekkee.sekkeekekeeeeeekkkkk.kkpnvdtsflp 68 
                 k  ++ddd+++eeeee+++++++++++++ + +++++ek+++ee +kk+k ++  +++s++p
  KHJ31473.1 239 KDNYHDDDDDDEEEEEEEDDDDDDDDDDDdDVENDDDEKNKKEE-SKKTKiIEILPEVSLVP 299
                 44555555554444333333333333333122222232323332.33333455555555555 PP

>> DNA_pol_phi  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1  29.3    0.0046       2.5     638     681 ..     242     283 ..     228     297 .. 0.35

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0046
  DNA_pol_phi 638 fedededeeddeeeeeeddeededseedddeeesdedeededde 681
                  +   d+d++d+eeeeeedd++d+d+++ddd e++d+++++++++
   KHJ31473.1 242 Y--HDDDDDDEEEEEEEDDDDDDDDDDDDDVENDDDEKNKKEES 283
                  1..12222222222222222222222222222222222222222 PP

>> BUD22  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2  15.6     0.005       2.7     223     263 ..     243     282 ..     218     296 .. 0.40

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.005
       BUD22 223 lasddededeyneetdeesseesdssdssesasesesesse 263
                  ++dd+de+ ++ee+d+++++++d++d+ e++++++++++e
  KHJ31473.1 243 HDDDDDDEE-EEEEEDDDDDDDDDDDDDVENDDDEKNKKEE 282
                 112222222.1111111111111111111111111111111 PP

>> Vfa1  AAA-ATPase Vps4-associated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   9.9    0.0081       4.4      74     129 ..     237     285 ..     213     297 .. 0.42

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0081
        Vfa1  74 kvkkeyeekqkkkkekekkkkekdkkdkdkkkekekdkkkekekeeekkkelkkae 129
                 k k +y++  + ++e+e+++      d+d+++++++d++ e++ ++ek+k+ ++++
  KHJ31473.1 237 KKKDNYHDDDDDDEEEEEEE------DDDDDDDDDDDDDVEND-DDEKNKKEESKK 285
                 22333333333322222222......11111111111111111.222222222222 PP

>> FYDLN_acid  Protein of unknown function (FYDLN_acid)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7  21.7     0.011       5.8      63     106 .]     237     276 ..     210     283 .. 0.54

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.011
  FYDLN_acid  63 deedeeeeedvsdedadeeeeedddddvdleedddddvfleede 106
                 +++d+ +++d++de+    eee++ddd+d ++dddddv+ ++de
  KHJ31473.1 237 KKKDNYHDDDDDDEE----EEEEEDDDDDDDDDDDDDVENDDDE 276
                 222222222222222....2222333334555666666666654 PP

>> eIF-3c_N  Eukaryotic translation initiation factor 3 subunit 8 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   8.4     0.008       4.4     130     176 ..     241     287 ..     233     325 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.008
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX................... CS
    eIF-3c_N 130 kyredPeeeeeeeeedededdegedeededeksvkateavkkasesk 176
                 +y++d + +eeeeee++d+dd+++d++d++e++  + ++++++ ++k
  KHJ31473.1 241 NYHDDDDDDEEEEEEEDDDDDDDDDDDDDVENDDDEKNKKEESKKTK 287
                 56666666666666655555555555555555555555554444443 PP

>> CobT  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  16.7    0.0094       5.1     211     256 ..     239     284 ..     218     291 .. 0.41

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0094
        CobT 211 peeedeeeeedeeeeeeeseeeeeegedddkeeqeeaaseeeeeed 256
                 +++  +++++deeeeeee+++++++++ddd+ e+++++++++ee++
  KHJ31473.1 239 KDNYHDDDDDDEEEEEEEDDDDDDDDDDDDDVENDDDEKNKKEESK 284
                 2222222222222222222222333333333333333333333322 PP

>> TRAP_alpha  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1  12.0    0.0099       5.4      27      80 ..     236     289 ..     213     300 .. 0.56

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0099
  TRAP_alpha  27 aaaeedevddelvdveaedeeveeeeeeeeeeeeeeeedeeelkaspdadttil 80 
                 ++++++  dd+  d e+e+ee +++++++++  + e++d+e+ k++ + +t+i+
  KHJ31473.1 236 KKKKDNYHDDDDDDEEEEEEEDDDDDDDDDDDDDVENDDDEKNKKEESKKTKII 289
                 333333344443343444444444444444445566666667777777778776 PP

>> Pes-10  Pes-10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  12.8    0.0098       5.3     182     228 ..     243     286 ..     232     321 .. 0.58

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0098
      Pes-10 182 edseedd.ddiededeedesssstdsgiesedeElveereeeeeeeae 228
                 +d ++dd ++ e+ed++d+  + +d  +e++d+E    ++++ee +  
  KHJ31473.1 243 HDDDDDDeEEEEEEDDDDDDDDDDDDDVENDDDE----KNKKEESKKT 286
                 3333333355555555555555555555555555....3333333333 PP

>> Tom22  Mitochondrial import receptor subunit Tom22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   9.1     0.019        10      17      81 ..     247     316 ..     231     325 .. 0.46

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.019
       Tom22  17 egeeeelaeededeadetdsdseissdedddfdvedEtlldRi......vALkDiippttRksissavstt 81 
                 +++eee+ eed+d++d++d+d++++ ++dd+ + ++E+    i      v L  i  p  R+sis  ++t+
  KHJ31473.1 247 DDDEEEEEEEDDDDDDDDDDDDDVE-NDDDEKNKKEESKKTKIieilpeVSLVPIPKPIPRNSISTEITTI 316
                 1111222222233223334444444.445555555665433331111334555555566666666666555 PP

>> RRN3  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9  17.8     0.015       7.9     221     263 ..     243     283 ..     214     295 .. 0.49

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.015
        RRN3 221 ddeedeeleeeleededdedddeddeesdlddlssdeeaeede 263
                  d++d+++eee ee  dd+ddd+dd+++d ++++++++++e++
  KHJ31473.1 243 HDDDDDDEEEEEEE--DDDDDDDDDDDDDVENDDDEKNKKEES 283
                 33333333323122..222222222223333333222222222 PP

>> Cwf_Cwc_15  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8  23.4     0.018       9.9     111     149 ..     242     279 ..     212     288 .. 0.47

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.018
                 --------------------------------------- CS
  Cwf_Cwc_15 111 idaddedseeeeeeeeeesdddsdsdsdddddedetaeL 149
                   +dd+d++eeeeeee+++ddd+d+d+dd +++d++++ 
  KHJ31473.1 242 Y-HDDDDDDEEEEEEEDDDDDDDDDDDDDVENDDDEKNK 279
                 2.2222222222222222222222222222224444443 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1  20.4     0.022        12     120     173 ..     239     283 ..     227     291 .. 0.32

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.022
       CDC45 120 reayealeeeeesdeedeeeeeeddddeeeeeeeeedeedeeedeeeskkkrks 173
                 +++y+  ++++e++ee+       +dd+++++++++d+ ++++de++  kk++s
  KHJ31473.1 239 KDNYHDDDDDDEEEEEE-------EDDDDDDDDDDDDDVENDDDEKN--KKEES 283
                 33333333333332111.......11111111111111111111111..11111 PP

>> IFT57  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4  13.6     0.027        15     137     192 ..     240     290 ..     218     294 .. 0.59

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.027
       IFT57 137 eeveddaelelekveeeelikseeededeedeeeelklesekkeekekekeeeiie 192
                 ++      +++++ eeee   ++++d+d++d+++++++ +++k++ke++k+++iie
  KHJ31473.1 240 DNY----HDDDDDDEEEEEE-EDDDDDDDDDDDDDVENDDDEKNKKEESKKTKIIE 290
                 222....2223333333222.12223333333367888888888899999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1395  (0.0778069); expected 358.6 (0.02)
Passed bias filter:                      762  (0.042501); expected 358.6 (0.02)
Passed Vit filter:                       220  (0.0122706); expected 17.9 (0.001)
Passed Fwd filter:                        57  (0.00317921); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              33  [number of targets reported over threshold]
# CPU time: 0.84u 0.31s 00:00:01.14 Elapsed: 00:00:00.44
# Mc/sec: 3652.18
//
Query:       KHJ31474.1  [L=304]
Description: hypothetical protein EV44_g1773 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-31  107.3   6.7    2.2e-26   92.7   4.0    2.1  2  DUF1691   Protein of unknown function (DUF1691)
  ------ inclusion threshold ------
      0.022   15.3   1.7        2.7    8.6   0.0    3.1  3  DUF4405   Domain of unknown function (DUF4405)
      0.057   13.2   0.0       0.13   12.1   0.0    1.5  1  DUF3767   Protein of unknown function (DUF3767)


Domain annotation for each model (and alignments):
>> DUF1691  Protein of unknown function (DUF1691)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   3.6e-06     0.022       2      66 ..      81     138 ..      80     177 .. 0.76
   2 !   92.7   4.0   3.7e-30   2.2e-26       1     106 [.     182     285 ..     182     286 .. 0.94

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 3.6e-06
     DUF1691   2 llglHvlvnrivPllv.gdsskvgllyvahglarspplslleyaaLvgsgvlHivsGlakwlgllr 66 
                 ++ lHv+++ ++Pll    + ++  l + + +++s p+   e+ ++   +++H+++G++     lr
  KHJ31474.1  81 FASLHVTNTSFIPLLTqSIDESESYLLLTRPFYQSFPA---ELLFIGLPIAVHVTAGIV-----LR 138
                 789*************767777888899*********9...7777778899*******9.....32 PP

  == domain 2  score: 92.7 bits;  conditional E-value: 3.7e-30
     DUF1691   1 pllglHvlvnrivPllv.gdsskvgllyvahglarspplslleyaaLvgsgvlHivsGlakwlgllrilkkikkkkrrrrwliingiaaakaalglaGg 98 
                 pl+g H+l+nri+P+l+ g+ss++gl+yvah++a++p l+ + y +++g+++ Hi +G+++w +l+ i +  +++k rrrw++in+++aa a  +++Gg
  KHJ31474.1 182 PLVGSHILINRILPWLYeGGSSGIGLGYVAHSFAKHPLLASINYSLMIGLVTSHISWGFCRWKNLI-ISG--DSQKARRRWWTINSVSAALALGWIIGG 277
                 799*********************************************************999998.333..67788888******************* PP

     DUF1691  99 lgvvkrgg 106
                 +gvv+rgg
  KHJ31474.1 278 IGVVGRGG 285
                 ******97 PP

>> DUF4405  Domain of unknown function (DUF4405)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0   0.00045       2.7      42      62 ..      66      86 ..      46      88 .. 0.79
   2 ?    4.5   0.3    0.0089        53      49      65 ..     175     191 ..     169     192 .. 0.89
   3 ?   -2.3   0.0       1.1   6.7e+03      62      62 ..     236     236 ..     224     275 .. 0.63

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00045
     DUF4405 42 qwrdiHeilgllflilvvlHl 62
                 ++++ ++++++f i++ lH+
  KHJ31474.1 66 YLTKLQKYSSYAFTIFASLHV 86
                478999**************8 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0089
     DUF4405  49 ilgllflilvvlHlglh 65 
                 ++g+l++ lv+ H++++
  KHJ31474.1 175 LAGYLMIPLVGSHILIN 191
                 79************987 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 1.1
     DUF4405  62 l 62 
                 +
  KHJ31474.1 236 I 236
                 3 PP

>> DUF3767  Protein of unknown function (DUF3767)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.1e-05      0.13      34      76 ..     202     245 ..     197     259 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.1e-05
     DUF3767  34 gagavvGglrfvlkk.nvakaaNWavgafllgsivayeqCrarr 76 
                 ++g+++G +   + k ++  ++N++++  l++s +++ +Cr++ 
  KHJ31474.1 202 SSGIGLGYVAHSFAKhPLLASINYSLMIGLVTSHISWGFCRWKN 245
                 6788888888777663778899*******************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 2117.24
//
Query:       KHJ31475.1  [L=485]
Description: putative 3 -cyclic-nucleotide phosphodiesterase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.3e-52  177.3   0.5    1.2e-46  159.4   0.0    2.8  2  PDEase_II    cAMP phosphodiesterases class-II
  ------ inclusion threshold ------
      0.072   13.1   1.2       0.15   12.0   1.2    1.5  1  Lactamase_B  Metallo-beta-lactamase superfamily


Domain annotation for each model (and alignments):
>> PDEase_II  cAMP phosphodiesterases class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.4   0.0   1.3e-50   1.2e-46      80     285 ..     114     355 ..      10     369 .. 0.82
   2 !   14.9   0.4   1.2e-06     0.011     285     338 .]     427     480 ..     420     480 .. 0.93

  Alignments for each domain:
  == domain 1  score: 159.4 bits;  conditional E-value: 1.3e-50
                 TEEEEE-S---GGGTHHHHHHGGGGGS-S.--EEEEE-HHHHHHHHHHTBSSSSB--GGGSTT-.....-EEEEE--TT--EE.....-SSSSEEEEE. CS
   PDEase_II  80 niksylItHsHLDHvsglvinSaefykaqlkkktivGlpytInalqkhlFNnkvWPnlpsfkrv.nlislvklielepkelnk.....ltettldvvan 172
                  +++y ItH+HLDH+sglv+nS++     +k+k i  lp tI al+kh+FNn +WPnl++++    lis+ +l e   + +n+     +te  + ++ n
  KHJ31475.1 114 LVETYIITHPHLDHISGLVVNSSGLTG--IKPKKIAALPPTICALKKHIFNNVIWPNLTNENNGaGLISFKRLAETRSSTVNSndgkdFTEICEGLQVN 210
                 589*********************999..79****************************9985414555555555444444431111167777778887 PP

                 ....................................EEEEEEE-TTT--EEE............EEEEEEEETTT--EEEEE-S-----TTTS-HHHHH CS
   PDEase_II 173 efsfs..........................vkvktfevnhgslikknsevl............SsaflftdevskesilvfgDvesdlssseslnlki 233
                     s                           + ++ ++  +         +            Ssaf ++d   + +il+fgDve+d+ ss+++n+ +
  KHJ31475.1 211 AWGVShgrcsdkheigvvatetlspdellyqNSSTPGHLREDRTT------KnpntherigvyeSSAFFIRDIATGTQILIFGDVEPDSISSCPRNKYV 303
                 777779999999999777777777777777733333333333333......0333335566667*********************************** PP

                 HHHHHHHS-GGGEEEEEEE--S-TT--HHHHTTS--HHHHHHHHHHHHHHHT CS
   PDEase_II 234 wkviaelIkrdkLkaIliEcStpkeipdeelyGHltPrllikelkqLatlst 285
                 w+  a++I   +L++I+iEcS     + + l+GHl Pr+li+e+k Lat ++
  KHJ31475.1 304 WSEAAPKIVAGELRGIFIECSYDDTRAVDILFGHLAPRYLIEEIKVLATEVE 355
                 ***********************999999*******************9764 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1.2e-06
                 T-TT.TTTT-EEEEE-B---S-SS.-HHHHHHHHHHHHHHHTT---EEEE--TT CS
   PDEase_II 285 tsteqpllgLnviveHvKsqvaedadprktileelekLkeaenlgvrisIaleG 338
                 ++ + pl g ++i+ H K++  ++++ ++ i ++l + +++ +lg++++I  +G
  KHJ31475.1 427 NEAHLPLKGVKIIIIHTKDNLDDSPQVANIIHQQLLEHEKKAQLGCEFIISRSG 480
                 566789********************************************9998 PP

>> Lactamase_B  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.2   1.7e-05      0.15      49      61 ..     119     131 ..     115     133 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.7e-05
                  E-SBSSHHHHTTG CS
  Lactamase_B  49 ilTHlHlDHiGgl 61 
                  i+TH+HlDHi+gl
   KHJ31475.1 119 IITHPHLDHISGL 131
                  9***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3682.19
//
Query:       KHJ31476.1  [L=728]
Description: putative ubiquitin family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0031   18.0   0.0      0.015   15.9   0.0    2.2  1  DUF2407    DUF2407 ubiquitin-like domain
  ------ inclusion threshold ------
      0.022   14.5   0.0      0.058   13.1   0.0    1.7  1  ubiquitin  Ubiquitin family


Domain annotation for each model (and alignments):
>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.6e-06     0.015      22      71 ..      51     100 ..      35     149 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.6e-06
     DUF2407  22 ntttvagLkqliRerlpaelasrrLrLIyaGrlLedttslasslklpees 71 
                  t+ v+ Lk+liR+ l  +  ++  rLI++Gr+L+ +t+  s++  +e  
  KHJ31476.1  51 ITLQVKDLKKLIRDSLFCRPPDELQRLIHHGRMLTRETETMSEIFGDEAL 100
                 467899**********988899999**********999988888877554 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   6.5e-06     0.058      16      57 ..      50      94 ..      42     114 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 6.5e-06
                ETTSBHHHHHHHHHHHH.TSSGGGE.EEEETTEEE.-TTSBHGGH CS
   ubiquitin 16 eesdtveelKekiaeke.gipaeqq.rLiysGkvL.edertleey 57
                + + +v++lK+ i +     p++++ rLi++G+ L ++ +t++e+
  KHJ31476.1 50 PITLQVKDLKKLIRDSLfCRPPDELqRLIHHGRMLtRETETMSEI 94
                557799*******9998656666655*********9999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (728 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1219  (0.0679904); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.41
# Mc/sec: 5336.32
//
Query:       KHJ31477.1  [L=553]
Description: putative phosphatidylserine decarboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-73  245.8   0.0    4.9e-73  245.0   0.0    1.4  1  PS_Dcarbxylase   Phosphatidylserine decarboxylase
  ------ inclusion threshold ------
       0.16   11.9   0.0        0.4   10.5   0.0    1.7  1  Biotin_lipoyl_2  Biotin-lipoyl like


Domain annotation for each model (and alignments):
>> PS_Dcarbxylase  Phosphatidylserine decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  245.0   0.0   5.4e-77   4.9e-73       1     199 [.     195     548 ..     195     549 .. 0.96

  Alignments for each domain:
  == domain 1  score: 245.0 bits;  conditional E-value: 5.4e-77
  PS_Dcarbxylase   1 lneffvrklkdgaRpidddpgaivsPaDgrilqigeieegsviqvKgityslrdLlgeasess................................ 63 
                     l+ ff+r+lk+g Rp+d++p++++sPaDgr+lq+g i+ g+v+qvKg+tysl++Llg + +++                                
      KHJ31477.1 195 LASFFYRSLKPGSRPLDANPNSLISPADGRVLQFGLIDGGEVEQVKGVTYSLEALLGRKVSETplksheesetasseksvteqkfgqetvkhnee 289
                     578*******************************************************99999******************************** PP

  PS_Dcarbxylase  64 ............................................................adsfkngyfvviyLspgdyHryhaPvsgkveerrh 98 
                                                                                   + +++y++viyL+pgdyHr+h+P+s++v+ rrh
      KHJ31477.1 290 farvndvpytlvnlfsgsakqpkikaedvsttpkptseaeayadlalgksscfskissknRAQKTALYYIVIYLAPGDYHRFHSPCSWVVKARRH 384
                     ********************************************************9988777789***************************** PP

  PS_Dcarbxylase  99 ipGellsvnpsalkelrglftlneRvvlview.kGkvavvpvGatnvgsivln.......................................... 150
                     ++Gel+sv+p+ ++ l+glftlneRvvl+++w  G+++++pvGatnvgsi++n                                          
      KHJ31477.1 385 FAGELYSVSPYVQRMLPGLFTLNERVVLLGRWrWGFFSYIPVGATNVGSIKINfdrelktnslvtdtaadlaakaaaergdpycgyseatyeaas 479
                     *******************************645************************************************************* PP

  PS_Dcarbxylase 151 .vlkgdelkkGeelGyFqfGStvvlvfeag..kfi..................eslvekgqkvkmGeklg 199
                      +l g  l++Gee+G+F +GSt+vlvfea   +                     + ve+gqkvkmG++lg
      KHJ31477.1 480 pTLRGYALSRGEEMGGFMLGSTIVLVFEAAkgE-RptldegwmgesskrrggwHWAVEQGQKVKMGQALG 548
                     *99*************************76442.1467788889999999*****************997 PP

>> Biotin_lipoyl_2  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   4.5e-05       0.4      16      31 ..     533     548 ..     532     553 .] 0.86

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 4.5e-05
  Biotin_lipoyl_2  16 lnVkdGqrVkaGdvLa 31 
                      ++V++Gq Vk G+ L 
       KHJ31477.1 533 WAVEQGQKVKMGQALG 548
                      89***********995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (553 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.22s 00:00:00.74 Elapsed: 00:00:00.37
# Mc/sec: 4524.19
//
Query:       KHJ31478.1  [L=559]
Description: putative siderophore iron transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-14   53.4  55.1    1.9e-14   53.4  55.1    3.2  2  MFS_1     Major Facilitator Superfamily
      3e-07   29.2  20.9    4.1e-07   28.8  20.9    1.1  1  TRI12     Fungal trichothecene efflux pump (TRI12)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.4  55.1   2.1e-18   1.9e-14       1     352 [.      47     464 ..      42     465 .. 0.78
   2 ?   -4.1   0.3      0.61   5.5e+03     277     296 ..     523     542 ..     519     546 .. 0.59

  Alignments for each domain:
  == domain 1  score: 53.4 bits;  conditional E-value: 2.1e-18
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa.sslwlllvlrvlqGlg 98 
                 ++l++f+++l+  + + +++ ++++++       g+  ++ ++  +++ l ++ ++d +Gr   ++l+++++ +g ++++ a  ++ ++ ++ ++  +g
  KHJ31478.1  47 VFLIFFFISLQQQVHFNVVS-YVTSSFM-LLPLTGTTSVVSSVIGGIFRLATAKFIDIVGRPEGFILMVAFTTIG-IIMMAAtRNIETFTAAQIFYWIG 142
                 57777888888888888888.8888888.555568899999**********************************.44443435555************ PP

       MFS_1  99 agalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafv.lfllllpeepperkrkspkeee........ 188
                   ++  ++ +++ad +++++r++++++ ++ + + + +gp +++  ++  gW++++  +a +    ++ l+++l++ e+++rk     e++        
  KHJ31478.1 143 FDGMGYVMDVFMADTSSPKNRALVYAFSTTPYIITTFIGPRIAATYLERTGWPWAYGTFAMIIPAIALpLIYVLYRNERKARKSGLIPELKcsrtlqns 241
                 *********************************************************9999988888878888888877777777777777******** PP

       MFS_1 189 ............................................................kgtgpaplvpawkallkdpvlw.illialllfffgfsg. 225
                                                                             k   p +++p +k+l+ +  +w ++++a +lf   f++ 
  KHJ31478.1 242 isyyffefdviglillssgfvlillpfslasyqargwasrkililftsglvcssgfafweKFLTPVSFIP-FKLLKDSS-IWgSCMLANFLFI-SFYLw 337
                 *****************************99999777666665555544444444444444444444444.44444444.4675555555554.33334 PP

       MFS_1 226 lltllplylqevlglsglllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavt.ssavllllvlvl.iGfglgfvfpsll 322
                    +lp+ lq v+gls    ag+++ +++++++  a++++ l++ +gr + l +  l+l l+ +gl++     s+++ +++++ + i f++g  ++s +
  KHJ31478.1 338 DNNFLPF-LQVVYGLS-ITNAGYISNIYSIGSCLWAVIFAGLLRATGRFKHLAILHLCLELLGVGLMIHFRQpSTYIGYVIMCQIfIAFASGGLVISEQ 434
                 7788888.6*******.899999999999999999********99999666666666665555555554444356666666555559997777766666 PP

       MFS_1 323 alasdlappeeagtasglfntagslggalg 352
                  ++   ++ e  +  ++l  +++slgga+g
  KHJ31478.1 435 MAIIAACSHETVAIPLALLALFSSLGGAIG 464
                 6666666677799***************99 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 0.61
       MFS_1 277 lllallllllaalglallav 296
                 ++ +++++++++ ++++lav
  KHJ31478.1 523 WYQTCIGAAFLLPCFFFLAV 542
                 55556666666666666655 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8  20.9   4.6e-11   4.1e-07      96     477 ..      94     484 ..      58     500 .. 0.80

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 4.6e-11
       TRI12  96 lvmgrltdrfgrrpfvilthilglvgaivgctatkfntllaamtllgvaagpag.asplfvgelmsnktkflgllivsipvvvtsglspylgqrlaiqg 193
                 l   ++ d +gr    il   +  +g i+ +++ +++t+ aa  +  +     g    +f+ +  s k + l     + p ++t+ ++p +      + 
  KHJ31478.1  94 LATAKFIDIVGRPEGFILMVAFTTIGIIMMAATRNIETFTAAQIFYWIGFDGMGyVMDVFMADTSSPKNRALVYAFSTTPYIITTFIGPRIAATYLERT 192
                 455677899999988899999999*******99**********999988665552679***********************************99999* PP

       TRI12 194 swrwifyiy.iitsaiavllivvwyyppsfaqlhg....kkvrk..ree....lakldwigiilvivgvslfllgvswggkpnspwnsakviglissgl 281
                  w w +  + +i+ aia+ li v y     a+  g     k+++  ++     +   d ig+il++ g  l+ll  s        w s k++ l++sgl
  KHJ31478.1 193 GWPWAYGTFaMIIPAIALPLIYVLYRNERKARKSGlipeLKCSRtlQNSisyyFFEFDVIGLILLSSGFVLILLPFSLASYQARGWASRKILILFTSGL 291
                 *****977637899***********98877766653332233331122211114579****************************************** PP

       TRI12 282 gslvvfalyevygkpvrpivppalfkdtrgfvcillissimgamnlslviiypqqvvnifgsslknweetawmsatasfgtgagvvvlgslfhlv.rhi 379
                  +   fa++e +  pv  ++p  l+kd+  +   +l   ++ ++ l    + p   v ++g s+ n   + ++s   s+g+    v++  l+    r  
  KHJ31478.1 292 VCSSGFAFWEKFLTPVS-FIPFKLLKDSSIWGSCMLANFLFISFYLWDNNFLPFLQV-VYGLSITN---AGYISNIYSIGSCLWAVIFAGLLRATgRFK 385
                 ***************96.79*********9999999999999999998888886433.68999987...578999999999888888777766551333 PP

       TRI12 380 rwqilvgalwltaflgamssvnrdnknaaialsvlsgfvvawaqditmllvqf..i..ttdedlgvafavvaaarpfagsiftaafislysnrypkela 474
                    il  +     +lg    +   +  + i   +++ + +a+a    ++  q+  i   + e + + +a++a    + g+i t+   ++ +n++p  l 
  KHJ31478.1 386 HLAILHLC---LELLGVGLMIHFRQPSTYIGYVIMCQIFIAFASGGLVISEQMaiIaaCSHETVAIPLALLALFSSLGGAIGTSISGAIITNKFPAILD 481
                 33444333...3456766677777788889999999999999887555444431131145788888889999999999999999999999999998776 PP

       TRI12 475 shl 477
                   l
  KHJ31478.1 482 RAL 484
                 555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (559 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      248  (0.0138323); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.37
# Mc/sec: 4499.72
//
Query:       KHJ31479.1  [L=283]
Description: putative alanine racemase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.3e-20   71.6   0.0    1.2e-18   67.5   0.0    2.0  1  Ala_racemase_N  Alanine racemase, N-terminal domain
  ------ inclusion threshold ------
      0.061   12.2   0.0      0.095   11.6   0.0    1.3  1  DHQS            3-dehydroquinate synthase II


Domain annotation for each model (and alignments):
>> Ala_racemase_N  Alanine racemase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.5   0.0   1.4e-22   1.2e-18      11     219 .]      27     278 ..      21     278 .. 0.84

  Alignments for each domain:
  == domain 1  score: 67.5 bits;  conditional E-value: 1.4e-22
                     HHHHHHS.CTTSEEEEE-HHHHHTTHHHHHHHHHHHTTESEEEESSHHHHHHHHHTTS.CSEEEEESCSTGGGHHHHHH...T.TEEEEESSHHH CS
  Ala_racemase_N  11 rrlrala.gpgaklmavvKanayghgavevaralaeggadgfgvatleEalelreagi.tapilvlegfspeelaalae...y.dltvtvdsleq 99 
                     +r++++a +++++l+av+K   ++   + +++  + +g+++fg+++++E++e +e    + ++  ++g ++++ +al     +  l+  vds ++
      KHJ31479.1  27 NRIASKAlNHDVRLVAVSKL--KPPSDILALY--Q-EGHRHFGENYFQELEEKAELLPkDIKWHFIGGLQSNKCRALSSkisNlFLVSSVDSTKK 116
                     4566666699**********..9999988888..3.45*************99988877778888999666666555554445599999999999 PP

                     HHHHHHHHHH..TTS-EEEEEEBESSSS..SSSBSC.HHHHHH.HHHHHHTTTEEEEEEE-S-SST............................. CS
  Ala_racemase_N 100 lealaaaare..agkplrvhlkidtgmg..RlGftp.eeleel.lealaalpglrleglmtHfasa............................. 159
                     + +l+  ++   ++ pl+vh++++t+ +  ++G  p  e  +l l  l+++p+l+l glmt+ a                               
      KHJ31479.1 117 ATQLNLGRSLlsTNVPLNVHIQVNTSSEdsKSGTIPgTETTALaLHILNSCPHLHLLGLMTIGAINrsvavtcgeasenedfkvlkqerdrleei 211
                     998886654466*************98899***888766655505566679**************99***************************9 PP

                     ...TSTS..HHHHH.HHHHHHHHHHHHHHTT.GGGSEEEEESHHHHHHSG.GGTTEEEESGGGGT-SS CS
  Ala_racemase_N 160 ...depd..eetea.qlarfeealeelekag.lrppvvslanSaaillaa.ahfdmvRpGialyGlsp 219
                        d  +  ++  +  +++  ++ e++++++ +++  +s+++S ++  a+ + +d+vR+G+ ++G +p
      KHJ31479.1 212 llnDP-NknDFQSRwGIECHPNLNETMSSENkIKKLELSMGMSNDFEVAIeMGSDEVRVGSTIFGQRP 278
                     99733.3366777789***********99999*****************6477************997 PP

>> DHQS  3-dehydroquinate synthase II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.1e-05     0.095     312     344 ..      34      66 ..      18      74 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.1e-05
        DHQS 312 vtedgkaisvteLkeGdevlvyleekaRHfGik 344
                 +++d + ++v++Lk+   +l+ ++e++RHfG +
  KHJ31479.1  34 LNHDVRLVAVSKLKPPSDILALYQEGHRHFGEN 66 
                 56777899***********************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       387  (0.0215851); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2039.90
//
Query:       KHJ31480.1  [L=307]
Description: putative methylthioadenosine phosphorylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-37  129.5   0.1    1.3e-37  129.3   0.1    1.0  1  PNP_UDP_1  Phosphorylase superfamily
  ------ inclusion threshold ------
       0.17   12.2   0.0       0.29   11.5   0.0    1.3  1  DUF1064    Protein of unknown function (DUF1064)


Domain annotation for each model (and alignments):
>> PNP_UDP_1  Phosphorylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.3   0.1   1.5e-41   1.3e-37       2     234 .]      14     256 ..      13     256 .. 0.90

  Alignments for each domain:
  == domain 1  score: 129.3 bits;  conditional E-value: 1.5e-41
                 EEEEESSH....HHHHHHHHHEEEEEEEEEE.TTEEEEEEEE.TTEEEEEEE--....SSHHHHHHHHHHHHHHHC--SEEEEEEEEEESSTTT-TT-E CS
   PNP_UDP_1   2 iaiivgsp....gevellaespleetpfgregrgfkfvtGtl.kgkpvvivstG....iGkpnaavvaeirllkefgvkaiiriGtaGglnpdlkvGDv 91 
                 +a+i+g++    +++ ++a+     tp+g +  +  + + ++   ++ ++ ++G    i ++ +   a+i++l + gv++ii+++++G+l++++++ D+
  KHJ31480.1  14 VAVIGGTGiqnlDGFVPIASV-NPLTPWGYP--SAPILILKHgDSHVAFLSRHGthhqIAPHEIPSQANIAALRSIGVRTIIAFSAVGSLQEEVRPRDF 109
                 789999999777777888888.999999999..888888888666777999999********************************************* PP

                 EEEEEEEE.SSSCCGCCTHHCCTCCCCTTSSEE--HHHHHHHHH...CHHTTTTTEEE.EEEEEESESS-CHHHHHHHHHHTC-CEEESSHHHHHHHHH CS
   PNP_UDP_1  92 vipddain.fdgrsplygpkeegqyfpdsydapadpelrallke...aaealgikvhr.GvvatadgfyaeteaelrllrrlgadaveMEtaavaqlAr 185
                 +ipd++i+ + g +p +++ +++++++ ++++ +d+++ +++ +    +e +++++h  G++++++g++++t+ae++l+r +g ++++M++ ++a lAr
  KHJ31480.1 110 IIPDQIIDrTKGIRPFTFFAQGIVGHVSFAEP-FDEKIAKIISRcahILEGENVRMHDkGTIICMEGPQFSTRAESNLYRAWGGSIINMSALPEAKLAR 207
                 ********656666666666667777777777.***********776777777********************************************** PP

                 HTT--EEEEEEEEETTTBETTCTCH.HCCCHHHHHHHHHHHHHHHHHHH CS
   PNP_UDP_1 186 elgipfaairvvsdlaaggadaeatheeveefaqeaaknaaalllalla 234
                 e++i +  i++ +d+   + +++ +++ v+  ++++++na +l+ a+l+
  KHJ31480.1 208 EAEIAYQMICMATDYDCWHSSDNVDVAMVMGHMTANSTNARKLVAAVLD 256
                 **************777788999999*******************9985 PP

>> DUF1064  Protein of unknown function (DUF1064)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.2e-05      0.29       9     104 ..     171     258 ..     165     266 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.2e-05
     DUF1064   9 vvidgikFDskaeakyYqeLkllkaagkilkleLqpkfeLqekfkknGkkyrkikYvaDFliykedgkveviDvkGmatkdakikkklFeakyrev 104
                 + ++g +F  +ae++ Y         g i+++   p+ +L+ + +     y+ i  ++D+  +++  +v+v  v G +t + +  +kl  a   e+
  KHJ31480.1 171 ICMEGPQFSTRAESNLYR-----AWGGSIINMSALPEAKLAREAEIA---YQMICMATDYDCWHSSDNVDVAMVMGHMTANSTNARKLVAAVLDEL 258
                 567788888888888887.....667889999999999998877766...*******************************999999987766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2423.51
//
Query:       KHJ31481.1  [L=586]
Description: putative glycosyltransferase family 57 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     8e-126  420.8  33.1    5.3e-79  266.4  10.0    2.3  2  Alg6_Alg8  ALG6, ALG8 glycosyltransferase family


Domain annotation for each model (and alignments):
>> Alg6_Alg8  ALG6, ALG8 glycosyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  266.4  10.0     3e-83   5.3e-79       5     231 ..      59     287 ..      45     297 .. 0.92
   2 !  160.1  15.1   5.1e-51   9.1e-47     226     482 ..     326     556 ..     307     560 .. 0.85

  Alignments for each domain:
  == domain 1  score: 266.4 bits;  conditional E-value: 3e-83
   Alg6_Alg8   5 klll..........ipmyrStDFEvqRnWlaiThslplseWytedlseWtLDYPPlfAYfeyllskvakkvldpemlalessrgyesestklFqRltVi 93 
                 +++           +p +  +D+E+qR+W+++T++lp+s+Wy+ dl +W+LDYPPl+AY+++ll++++ ++++++++al +srg +++++k+F+R +Vi
  KHJ31481.1  59 RWAAglwdysgykkPPKF--GDYEAQRHWMEVTTQLPISQWYFYDLDWWGLDYPPLTAYHSWLLGNLG-SIINNNWFALYTSRGSDDPDLKIFMRSSVI 154
                 455466777777779***..************************************************.999*************************** PP

   Alg6_Alg8  94 vsdlllfipavlllvekakkks..kkkkrlvllllillspgllliDhiHFQYNgvllGllllsiaallkkkdlllgallFvllLnfKqialylApayfv 190
                 +s++l++ipav+++v+k ++ +  ++ ++ +++++ill+p+ +liDh+HFQ+N+v+lGl+++si+++l +k   ++++lFvl+L+fKq+al++Apa+f+
  KHJ31481.1 155 LSEYLIYIPAVIFFVQKLTTDQgiHNWNANIAVIAILLQPATILIDHVHFQFNNVMLGLVVASINCILVGKLK-WSCFLFVLALSFKQMALFYAPAIFA 252
                 **************97744444578999999****************************************99.6************************ PP

   Alg6_Alg8 191 ylLrkyclkkskkklkvslkrllklgvvvlavfallfgPfl 231
                 +lL++ ++       k +l+r++ +++++la+fal+++P++
  KHJ31481.1 253 FLLGRSIYP------KLNLRRFIGISITTLASFALILLPLI 287
                 ******773......579*********************98 PP

  == domain 2  score: 160.1 bits;  conditional E-value: 5.1e-51
   Alg6_Alg8 226 lfgPflasgeqlkqvlsRlFPfkRGLfedyvApNfWalynvvdkvlevvlkkaevasltrglvqdvsflvlpeilpkltllltllailpslvklllkps 324
                  ++P++    q+ q+l+R+FPf+RGLfed+vA NfW+++nvv+k+++                      +    l++++ll+tl+a++p ++ ++lkp+
  KHJ31481.1 326 WYYPII---LQFAQILHRIFPFARGLFEDKVA-NFWCALNVVVKFRN----------------------FPLVLLQQASLLATLAAVIPPCLVIFLKPK 398
                 455666...39*********************.**************......................5556677899******************** PP

   Alg6_Alg8 325 kklfllalvlcalsfFlfsfhVHEKaiLlvllpltllalesre....dlslvlllsvvgtfslfPLlfkdgellikvvltllwllllllslkklvkksl 419
                    + la+ ++a+sfFlf+f+VHEK+iLl+l+p+tll++ s+        ++ l++v+g++++fPLl + ++ ++++vlt lw++ll+l +k ++ +s 
  KHJ31481.1 399 TAALPLAFSSTAWSFFLFGFQVHEKSILLPLMPMTLLLAGSQGmsehMRAWIGLANVLGVWTMFPLLQRVNLRVPYFVLTGLWMYLLGLPTKLFCLNS- 496
                 **************************************98775555345566678899******************************8777666555. PP

   Alg6_Alg8 420 kkkkkkvlldrleklyllsllallvllvllellvlkkpperlpflplllisvycsvgvfvlfl 482
                  k +++++++ l++++++ + +l+ +++lle+++  +pp + p+l++++++ + + g+f+++l
  KHJ31481.1 497 -KGRSQITMEDLTSIVHTLYYVLMGFWHLLEAFI--PPPLSKPDLWTVINIEIGASGFFLCYL 556
                 .345667777777766666554444444******..899**************9999888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (586 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      210  (0.0117129); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 4049.69
//
Query:       KHJ31482.1  [L=417]
Description: putative tumor suppressor candidate 4 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.2e-132  440.7   5.6   3.7e-110  368.7   3.3    2.0  2  NPR2      Nitrogen permease regulator 2


Domain annotation for each model (and alignments):
>> NPR2  Nitrogen permease regulator 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  368.7   3.3  2.1e-114  3.7e-110       3     304 ..       2     289 ..       1     293 [. 0.96
   2 !   72.9   0.0   1.2e-24   2.1e-20     343     438 ..     292     406 ..     288     408 .. 0.91

  Alignments for each domain:
  == domain 1  score: 368.7 bits;  conditional E-value: 2.1e-114
        NPR2   3 ikaifyavFhpteGtkivhqvPegsivtssesdekealFeFdtvknyviPkpqlcnrllslki..nkykvlgyPvnienekYsRneFtFnfafvidyde 99 
                 i +ifya+F p++Gtk+v+q+P gsiv++  + +k  lF+F+ +++y+iP++ +cn+++ ++     y++lg+Pv+i+++kY+RneF+Fnf++vi+ d 
  KHJ31482.1   2 ISGIFYARFLPEQGTKVVNQSPTGSIVPE-AEVDKPCLFDFEKLAEYIIPRQVFCNHYIMVCDpqSTYRILGHPVCIQDSKYKRNEFIFNFCVVIKAD- 98 
                 89***************************.8999*************************99988899*******************************. PP

        NPR2 100 sdttpYesvvkrlgrllrvlEeqnkfLskedkdvvffksaklaeadatvnvpgasklssieslieqileDLnnysEcviplddsnsvdlKLfPilpePv 198
                 +d +pYe vv+rl+ +++++E qn+fLs+++k+               ++v+   +  si++l+e+i+eDLnny+Ec+ip+dd+n+++lKLfPi+++P+
  KHJ31482.1  99 TDPSPYETVVRRLASTFTEMELQNQFLSEKEKQ------------PNGISVTQGGR--SIAALLEIIKEDLNNYNECMIPVDDANTINLKLFPIRRPPP 183
                 ******************************992............22344444555..8**************************************** PP

        NPR2 199 nikayqvPiatvklsslvdvnwDltlkkilpyinGinsvkriaeladadlsLtkqciqhLlyYkcielldiFqfsniYaptneigdFlkdegeiadeCq 297
                 ++k++qvP+ +++l + +d++wDltl k+   i+Gi++v+r+a   ++ + Ltk ++qhLlyY++i ++d+F fsniYap   ig+F++++++++deC+
  KHJ31482.1 184 PVKSWQVPVPKINLLQRLDDTWDLTLAKVTRCIDGIREVRRVAIESNVPIELTKVALQHLLYYDTILMVDMFFFSNIYAPNSFIGEFIANKDDMQDECL 282
                 *************************************************************************************************** PP

        NPR2 298 ayvvvee 304
                 +yv ++ 
  KHJ31482.1 283 NYVCING 289
                 ****985 PP

  == domain 2  score: 72.9 bits;  conditional E-value: 1.2e-24
        NPR2 343 pskttlfrLyrslkqgqtvkeWvlqekkl....lagiDvrRliqFGvlkgliyrvhkypilnssak..............antllksl.dglkslDell 422
                 ++k +l+rL++sl  g+++ eW++ ++k+    ++ iDvrR+iqFG++kg++yrvh y++++                  ++++l s  dg++++De++
  KHJ31482.1 292 VDKYYLCRLFTSLGPGRSLIEWLKFHNKEgfevINYIDVRRFIQFGIIKGFLYRVHAYALSSQCITalkrdisektglteEESILESYsDGCHCIDEVT 390
                 67899*********************998888899*************************999777999**********9666666666********** PP

        NPR2 423 kelkvkeekleeklkk 438
                  e++++++++ ekl++
  KHJ31482.1 391 VEMNLSKNQIVEKLQE 406
                 ***********99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3087.00
//
Query:       KHJ31483.1  [L=602]
Description: hypothetical protein EV44_g1070 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (602 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       688  (0.0383736); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 4199.30
//
Query:       KHJ31484.1  [L=358]
Description: putative metalloendopeptidase of the mitochondrial inner membrane [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.6e-33  114.4   0.0      1e-32  113.5   0.0    1.4  1  Peptidase_M48  Peptidase family M48


Domain annotation for each model (and alignments):
>> Peptidase_M48  Peptidase family M48
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.5   0.0   5.7e-37     1e-32       2     195 ..     146     328 ..     145     329 .. 0.93

  Alignments for each domain:
  == domain 1  score: 113.5 bits;  conditional E-value: 5.7e-37
                    --SSHHHHHHHHHHHHTT-..-EEEEEEE-GGGT-EEEEESSS-EEEEEEHHHH-SSB-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_M48   2 lreaelkevveelakeaglpkpltkvyvvnspkrNAFalgggknkrivltdgLlkqllseeelaaVlGHElGHikhrhsvvslivsllasillllg 97 
                    +r++++++v+++l+k+ gl++  ++v vv s + NAF+l+gg   ++++++g+l+ +++++ la Vl+HE++H  + h +++++ + l    l ++
     KHJ31484.1 146 RRTRQVNRVMNRLIKSCGLEHIDWEVNVVLSHELNAFVLPGG---KVFVMSGILSIAETDAGLASVLSHEIAHGLASHQAERMSNAFLIIWPLRIV 238
                    5889**************************************...*************************************************** PP

                    HHHHTT-SHHHHHTT--S---HHHHHHHHHHTTHHHHHHHHHHHHHHHHTTT.HHHHHHHHHHHHHHTT--S---HHHH.HHS-SS--HHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx RF
  Peptidase_M48  98 lallisraeedaagafldalavliglliillflalSRkrEyqADeagvellkrakdlvraliklakdlerqdvsaslrs.ellstHPplleRiqal 192
                    ++l++   ++   g+ l + +            + SR++E++AD +g+ +++ra++++ra+  l+k++e+++ ++ +++  +lstHP++++R + +
     KHJ31484.1 239 FLLFFDIFTGGVLGNLLLEFGLN---------RPASRTQEREADYIGLMMMARACYDPRAALVLWKRMEQVEAAHGKYEfPWLSTHPSTTSRTELI 325
                    *9999888877777776554442.........39****************************************9999989***********9988 PP

                    HH- CS
                    xxx RF
  Peptidase_M48 193 kel 195
                    +++
     KHJ31484.1 326 QKW 328
                    876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2832.55
//
Query:       KHJ31485.1  [L=591]
Description: putative lysophospholipase-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-12   47.1   0.0    7.6e-12   45.8   0.0    1.6  1  Patatin   Patatin-like phospholipase


Domain annotation for each model (and alignments):
>> Patatin  Patatin-like phospholipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   0.0   4.2e-16   7.6e-12       1     191 [.      21     274 ..      21     285 .. 0.81

  Alignments for each domain:
  == domain 1  score: 45.8 bits;  conditional E-value: 4.2e-16
     Patatin   1 LvlsGGGsrgafslgalkaL.................kkelgerfdiisGtSaGAiialllalgrdpaalvddlrnlllnkifdrdllirelaanlaar 82 
                 L+++GGG+rg++ l ++++L                   ++ ++fd+i G+ +G++ia++l+  r + ++ ++++  +++k f +d           +r
  KHJ31485.1  21 LSIDGGGVRGYSVLIIIQELmyrtyveihgkapkrnqIPKPADHFDLIIGSGTGGLIAIMLGRLRLDLETCKEMYIRTSRKVFESD-----------KR 108
                 89*****************888889999999999988899**********************************************...........9* PP

     Patatin  83 lsgllgkgglfdaealrellr.kvladktlkrlsarlgklpllks...................................................... 126
                   g + +++lf a  l+e ++  v+++ +lk+   + + +p  +                                                       
  KHJ31485.1 109 IAGIPYTSTLFKASKLEEAIKqCVMEHTILKSEGNDGAEPPAVDNfltnsmnnlirgrryhsrnssmvslstrvsrsssnppfsvadlgnpdallydkr 207
                 ********************9877777777777777777765555777777777777777777888888888888888888888888888887777777 PP

     Patatin 127 lftanqavpaittataatastanranglytedddd..dvdladavraSsafPglfppvsldgelyvD 191
                  + + +av+a    t++  ++a  +  ++++++++  d ++++a raSsa+ ++f+  +++   ++D
  KHJ31485.1 208 ENRTKTAVTAVYKGTPRGGQPALLRSYDSRKEPPPefDCKIWEAGRASSAMVLAFKEIQIRQSVFLD 274
                 5555555555555555555555555555555555566889999***********9877777666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       353  (0.0196888); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 4021.78
//
Query:       KHJ31486.1  [L=1000]
Description: putative calcium p-type atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-50  170.6   4.1      9e-50  168.7   0.7    2.8  2  E1-E2_ATPase     E1-E2 ATPase
    1.6e-45  155.1   9.5    1.6e-45  155.1   9.5    1.9  2  Cation_ATPase_C  Cation transporting ATPase, C-terminus
    8.3e-25   88.3   0.2    5.4e-24   85.7   0.1    2.4  2  Hydrolase        haloacid dehalogenase-like hydrolase
      3e-19   68.9   0.0    5.9e-19   68.0   0.0    1.5  1  Cation_ATPase    Cation transport ATPase (P-type)
    4.3e-17   61.5   0.1    1.3e-16   60.0   0.1    1.9  1  Cation_ATPase_N  Cation transporter/ATPase, N-terminus
      1e-08   35.8   0.0    2.9e-08   34.3   0.0    1.8  1  HAD              haloacid dehalogenase-like hydrolase
    1.6e-07   31.3   3.7    1.6e-05   24.8   1.3    2.5  2  Hydrolase_3      haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1     0.063   1.6e+02     112     159 ..      51      98 ..      36     106 .. 0.84
   2 !  168.7   0.7   3.5e-53     9e-50       2     181 .]     121     325 ..     120     325 .. 0.96

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.063
                   HHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTTHHHHHHHHHHHHHS CS
  E1-E2_ATPase 112 qkkldklgkvlvpvvlliallvflialllgkslaeallralallvaai 159
                   + +l+++  +lv++ l  a+l f++a++ +++  +a++  l++l++ i
    KHJ31486.1  51 ELILEQFKDQLVLILLSSAALSFVLAFFEEDGGLTAFIDPLVILTILI 98 
                   5578899999*******************9999999999888888765 PP

  == domain 2  score: 168.7 bits;  conditional E-value: 3.5e-53
                   SS--EEEEE-TTS-EEEEGGG--TTSEEEEETT-B--SEEEEEEE-S...EEE-TTTS---S-EE-.............G-TTEE-TT-EEEE-EEE CS
  E1-E2_ATPase   2 llpptakvirdgteeeidakelvpGDivllkagdrvpaDgrivegsa...evdesaLTGEslpvek.............ekgdmvfsGtvvvsgeak 82 
                   +++++akv+rdg +++i+a+elvpGDiv +  gdr+paD+r+++ ++    vd+++LTGEs+ v+k             ++++ +fsGt+vvsg+ +
    KHJ31486.1 121 YSANEAKVLRDGHLTQIRAEELVPGDIVSISIGDRIPADCRLLSIQSnsfLVDQAILTGESECVSKdtieisdskavkqDQTNILFSGTTVVSGHGI 217
                   57899*************************************99666669***************************999***************** PP

                   EEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTT.........HHHHHHHHHHHHHS-TTHHHHHHHH CS
  E1-E2_ATPase  83 avVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvflialllgksla.........eallralallvaaiPcaLplavpla 170
                   avV+ tg++t +g i + ++++ s+ tpl++kl+ +g +l++++ +i++lv+li++ ++++           ++l  a++l vaaiP++L+++++++
    KHJ31486.1 218 AVVVLTGSSTAIGDIHENISAQISAPTPLKQKLNDFGDTLAKAISIICILVWLINIPHFNDSShgswlkgaiYYLKIAVSLGVAAIPEGLAVVITTC 314
                   ********************************************************999988889999999889999******************** PP

                   HHHHHHHHHHT CS
  E1-E2_ATPase 171 lalgarrlakk 181
                   lalg+r++a k
    KHJ31486.1 315 LALGTRKMAAK 325
                   ********975 PP

>> Cation_ATPase_C  Cation transporting ATPase, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.76     2e+03      96     153 ..     260     281 ..     203     309 .. 0.61
   2 !  155.1   9.5   6.1e-49   1.6e-45       1     182 []     778     981 ..     778     981 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.76
  Cation_ATPase_C  96 itlvlsqifnalnlrsrreslfkfsglfsnkllllaillslllqvlivyvpglnavfg 153
                       + ++                                     ++v+++ +p++n+  +
       KHJ31486.1 260 AISII------------------------------------CILVWLINIPHFNDSSH 281
                      33333....................................44444444454444333 PP

  == domain 2  score: 155.1 bits;  conditional E-value: 6.1e-49
  Cation_ATPase_C   1 plplsaiqiLwinLvtDllpalaLaleppekdimkrpPrkkkepliskkmlrriliqgllqalvtllvffltlllfgisekenkls........ 86 
                      p +l ++q+Lw+nL+tD+lpa+aL+++pp+ +im++pPrk++epli + +++r +++g++++++t++ +++++ +++  +k + ++        
       KHJ31486.1 778 PEALIPVQLLWVNLITDGLPATALSFNPPDHNIMRQPPRKRNEPLIGGWLFFRYMLIGTYVGIATVAGYAWWFIFYSEGPKISFWQlshfhncs 871
                      67899*********************************************************************99999988888899999999 PP

  Cation_ATPase_C  87 ...............snyaqtmaFitlvlsqifnalnlrsrreslfkfsglfsnkllllaillslllqvlivyvpglnavfgtaplsleewlia 165
                                      + a+tm + +lv+++++na+n+ s++esl++   +++n+ ll++i+ls++l+++++yvp+l+++f+++pl+++ew  +
       KHJ31486.1 872 tmfpeigcqiftnssAKTASTMSLSILVVVEMLNAMNALSSSESLLT-LPVWKNMKLLYSITLSMALHFILLYVPILRTLFSIVPLNWMEWRAV 964
                      9************9999******************************.********************************************** PP

  Cation_ATPase_C 166 lllalvvllvdelvKll 182
                      l++++ v+++de +Kl+
       KHJ31486.1 965 LIISAPVIIIDEGLKLI 981
                      ***************96 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       5.3   1.3e+04     133     145 ..     215     227 ..     187     237 .. 0.71
   2 !   85.7   0.1   2.1e-27   5.4e-24       3     210 .]     343     709 ..     341     709 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 5.3
                 TTEEEEEEESSEH CS
                 xxxxxxxxxxxxx RF
   Hydrolase 133 agievvlltgdnp 145
                  gi vv+ltg++ 
  KHJ31486.1 215 HGIAVVVLTGSST 227
                 5788888888765 PP

  == domain 2  score: 85.7 bits;  conditional E-value: 2.1e-27
                 EEEEESBTTTBCHHHHHHHHHHHH.......CHHHHHHHHHH.....HHCHHHHHHHHHHHHHHHHHHHHHHETTTE...........HHHHTHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxx RF
   Hydrolase   3 tvvfDkdGTLttgepsvedvivsa.......alalaaaletg.....sehpigkalvaaakarsgaltgfatfigrg...........ayaigkpewlt 78 
                 +++ Dk+GTLtt ++sv +v+  +       +               +  p+gk   +  +    a+                     a++  ++  ++
  KHJ31486.1 343 VICSDKTGTLTTNQMSVSKVVYLNedgnfleE---------IdisgtTFAPYGKISSNNDEVQDLAC---------KsntiaqitevaALCNDSRLAFD 423
                 7999********************33322220.........13333333333333333333332222.........02332222333344444444444 PP

                 HHHCHHHHHHHHHHHHHHCHHHHHH.......................................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx.......................................................................... RF
   Hydrolase  79 aldippdlgaaigsaqsqgrtvall.......................................................................... 103
                 +    ++  ++ig+  + +  + ++                                                                          
  KHJ31486.1 424 KK---SKTFSNIGEPTEGALRALVEkigtqdpkynkskdniaesdslhfasswyeekfpristfefsrdrkcmsvlvgnnqeqrllvkgapesiierct 519
                 44...222222222222222222224444555566666666666777777777789999999999********************************** PP

                 ................................................................TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEE CS
                 ................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 104 ................................................................qaralavftiadplkvkpeaaeavasLkaagievv 138
                                                                                 +   l++ ++ dp  ++pe+a  v++ k+agi+v+
  KHJ31486.1 520 stiqgfhgkvapmskklsefifsevleygskglrvialasvhydtlnpcpkeakttqeysnierNLTFLGIAAMLDP--PRPEVAASVKKCKEAGIRVI 616
                 **************************************************************9999***********..******************** PP

                 EEESSEHHHHHHHHHHTT..............GGGESEEEEHHCES.......STTTSHHHHHHHHHHHTSTGGGEEEEESSHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 139 lltgdnpetaeraanqlG..............ddyfdaviasdiet.......vakpspegkvaaireLqgkpeevamVGDgvnDaaalaaAg 210
                 ++tgdn++tae++ +q+G               + fd+  +s+          ++ ++p++k + ++ Lq  +e vam GDgvnDa+al++A+
  KHJ31486.1 617 VVTGDNKNTAEAVCRQIGvignsestdgrsftGREFDNLSESEKIDavkkaylFSRVEPNHKFKFVELLQSLGEVVAMTGDGVNDAPALKKAD 709
                 *******************99999999888876666444433333357778888888*************88888****************98 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.0   0.0   2.3e-22   5.9e-19       1      91 []     413     521 ..     413     521 .. 0.91

  Alignments for each domain:
  == domain 1  score: 68.0 bits;  conditional E-value: 2.3e-22
  Cation_ATPase   1 ilcNsaafsensekdevkllGnktEsALlvlaekl....................gldteelreetkkvqeipFnssrKrmsvvlklepekkvrly 76 
                    +lcN++++  +++ ++++ +G++tE AL  l+ek+                    +   ++++e+++++ +++F+++rK+msv++ +  +++ rl+
     KHJ31486.1 413 ALCNDSRLAFDKKSKTFSNIGEPTEGALRALVEKIgtqdpkynkskdniaesdslHFASSWYEEKFPRISTFEFSRDRKCMSVLVGN--NQEQRLL 506
                    69*********************************888888888888888888777777778888*********************5..6****** PP

  Cation_ATPase  77 vKGApeiilkrCthv 91 
                    vKGApe+i++rCt++
     KHJ31486.1 507 VKGAPESIIERCTST 521
                    ************985 PP

>> Cation_ATPase_N  Cation transporter/ATPase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   0.1   5.1e-20   1.3e-16       2      69 .]       5      72 ..       4      72 .. 0.97

  Alignments for each domain:
  == domain 1  score: 60.0 bits;  conditional E-value: 5.1e-20
  Cation_ATPase_N  2 halsleevlekLetdlenGLtqaeaaerlkkyGpNelkekkkkslwvkllkqftnplvilLlvaalvs 69
                     +a+ ++evl+++ +++++GLt a++++ + kyG N+++e++++++w+++l+qf++ lv++Ll +a++s
       KHJ31486.1  5 YAKKINEVLNHFSVSETQGLTIAQVEQARVKYGCNAIAEEPPTPIWELILEQFKDQLVLILLSSAALS 72
                     577899************************************************************98 PP

>> HAD  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.0   1.1e-11   2.9e-08      87     188 .]     598     706 ..     564     706 .. 0.85

  Alignments for each domain:
  == domain 1  score: 34.3 bits;  conditional E-value: 1.1e-11
         HAD  87 dpgalellaahraaGdrvvvvSgglrplvepllaelgadevlatelevdd.rltgelglegkpvrgegkvaalre.wlaaegegidlee.......... 173
                 +p++ + ++++++aG+rv+vv+g ++  +e+++++ g   v++++  +d+  +tg+   e ++  +++k++a+++ +l+ + e+ +  +          
  KHJ31486.1 598 RPEVAASVKKCKEAGIRVIVVTGDNKNTAEAVCRQIG---VIGNSESTDGrSFTGR---EFDNLSESEKIDAVKKaYLFSRVEPNHKFKfvellqslge 690
                 47***********************************...****5455559*****...99999999******99966666666666666667777777 PP

         HAD 174 vvay.GDspsDlpllr 188
                 vva  GD+++D p+l+
  KHJ31486.1 691 VVAMtGDGVNDAPALK 706
                 99999********996 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.0    0.0027       6.8      19      54 ..     600     635 ..     596     683 .. 0.85
   2 !   24.8   1.3   6.1e-09   1.6e-05     203     247 ..     689     733 ..     677     741 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0027
                  HHHHHHHHHHHTTSEEEEE-SS-HHHHHHHHHHCCC CS
  Hydrolase_3  19 ktkeaikklkekgikvviATGRslravlpvleelgl 54 
                  + ++ +kk+ke+gi v++ TG +  +++ v +++g+
   KHJ31486.1 600 EVAASVKKCKEAGIRVIVVTGDNKNTAEAVCRQIGV 635
                  667889******************999999999886 PP

  == domain 2  score: 24.8 bits;  conditional E-value: 6.1e-09
                  GGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEE--GG CS
  Hydrolase_3 203 leeviafGDgeNDieMLeaaglgvAmgnaseevkkaAdyvtksnn 247
                   e v+  GDg ND + L++a++g+Amg++++  k aAd+v ++ n
   KHJ31486.1 689 GEVVAMTGDGVNDAPALKKADIGIAMGSGTDVSKLAADMVLADDN 733
                  5567778*********************************99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1000 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       765  (0.0426683); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.74u 0.27s 00:00:01.01 Elapsed: 00:00:00.42
# Mc/sec: 7214.59
//
Query:       KHJ31487.1  [L=450]
Description: hypothetical protein EV44_g0580 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.055   12.4   2.4       0.12   11.4   2.4    1.5  1  Miga      Mitoguardin
        0.1   12.9   0.3       0.22   11.9   0.3    1.6  1  DUF4149   Domain of unknown function (DUF4149)


Domain annotation for each model (and alignments):
>> Miga  Mitoguardin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   2.4   1.3e-05      0.12      24     115 ..     142     234 ..     122     259 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.3e-05
        Miga  24 gavvlallarylkrrrekkkq.kssaeqeelakevlktasvkkr.asekksrssssksndtlslasskassssaklsgslqslasvksvnssss 115
                  + v+ l++ ++krr +k k  + s+++++++++  + +    + +++ k  +s + sn +ls   +++ ++ +k s+s  sl s +    s  
  KHJ31487.1 142 CTFVICLASLRWKRRTSKGKMsNLSQQHNQMPMSNYSPP-LPSNlQTQTKYYNSCKYSNLNLSFLKHHSLKTVEKISSSRSSLFSQQKNPKSTP 234
                 335666777789999888777556666666666555554.44445889999999999*********99999999*********98776555443 PP

>> DUF4149  Domain of unknown function (DUF4149)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   2.5e-05      0.22       2      80 ..      13      90 ..      12     108 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.5e-05
     DUF4149  2 slglllGsqlwvtfvvapvlfrsLprhqfgelqsklFplyfglglalsvlllltevavg.seklasee.llqlllllvvll 80
                sl++l G ++ +t + ++vl++s p++ + e+ + + + + g   +l +l+l+ + +++    + +e+ +   +l++ +  
  KHJ31487.1 13 SLAVLSGLVILITDIISIVLYQS-PTPNSAEVLALVSSTFHGTTFVLMTLILCQYFKHHnP--QYPENlKPRGYLIAFAGT 90
                7899*******************.888899***********************99999941..233331333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       691  (0.0385409); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3323.05
//
Query:       KHJ31488.1  [L=263]
Description: putative adenosine rna-specific isoform adar-a variant [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.7e-05   22.5   0.0    0.00074   19.6   0.0    2.1  2  Dicer_dimer  Dicer dimerisation domain
    0.00083   20.0   0.0     0.0077   16.9   0.0    2.5  2  dsrm         Double-stranded RNA binding motif


Domain annotation for each model (and alignments):
>> Dicer_dimer  Dicer dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   8.3e-08   0.00074      18      79 ..      93     156 ..      78     173 .. 0.81
   2 ?    0.5   0.0     0.078     7e+02      59      78 ..     228     247 ..     187     261 .. 0.80

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 8.3e-08
  Dicer_dimer  18 tdlrpeyevkevedkergkfqaevtLPsnspl.rkieg.epmstkklAkrsaAfeackeLhkag 79 
                   +++ e++++ + ++++++f+++v+ P++ ++    +  ++ s kk Ak+ aA +a+  L+k +
   KHJ31488.1  93 ERTEAEFKINHDYSHKSPRFSCSVKIPESPSIlGDTQDpTTFSAKKPAKQYAAKKAIDWLIKFN 156
                  356788999888778**************9965555555*******************999976 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.078
  Dicer_dimer  59 tkklAkrsaAfeackeLhka 78 
                   kk+Ak ++A e++  L ++
   KHJ31488.1 228 GKKNAKDHVAREVVTFLTQL 247
                  58999999999988877764 PP

>> dsrm  Double-stranded RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   8.6e-07    0.0077      18      67 .]      98     152 ..      66     152 .. 0.71
   2 ?   -0.2   0.0      0.18   1.6e+03       4      34 ..     177     205 ..     175     240 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 8.6e-07
                 EEEEEEESSTSSSEEEEEEEEE........TTEEEEEEEESSHHHHHHHHHHHHHHHH CS
        dsrm  18 yeyvseegpphslpkFvvtvkv........ngklygsGvgsnKKeAeqsAAedalekL 67 
                 + +++++ +++s p+F+++vk+        + + + +++++ KK A+q AA++a+  L
  KHJ31488.1  98 EFKINHDYSHKS-PRFSCSVKIpespsilgDTQDP-TTFSA-KKPAKQYAAKKAIDWL 152
                 445555666566.*********8877777433444.66665.************9866 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.18
                 HHHHHHHHTTSEEEEEEEEEESSTSSSEEEE CS
        dsrm   4 kLqeycqkkgkppnyeyvseegpphslpkFv 34 
                 k   +c++ g   + ++++  +p++    ++
  KHJ31488.1 177 KVPDLCRRLGLNTPRYVIEPIVPSSP--MYS 205
                 66778999997777777777666553..555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       572  (0.0319036); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2049.05
//
Query:       KHJ31489.1  [L=649]
Description: putative major facilitator superfamily transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.3e-40  136.8  55.5    8.3e-40  136.8  55.5    2.2  2  MFS_1     Major Facilitator Superfamily
    4.5e-12   45.6  12.0    4.5e-12   45.6  12.0    2.4  2  Sugar_tr  Sugar (and other) transporter
  ------ inclusion threshold ------
       0.03   14.8   0.0       0.06   13.8   0.0    1.4  1  HTH_26    Cro/C1-type HTH DNA-binding domain


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.8  55.5   1.4e-43   8.3e-40       3     352 ..     158     559 ..     156     560 .. 0.88
   2 ?   -2.9   0.1      0.42   2.5e+03     238     259 ..     617     636 ..     612     642 .. 0.48

  Alignments for each domain:
  == domain 1  score: 136.8 bits;  conditional E-value: 1.4e-43
       MFS_1   3 laaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllfasslwlllvlrvlqGlgag 100
                 +++f++ ++ +i +++ p  +++++  s  ++++l t++ l++  +++++G lsd +Gr++ ll++l +++++ ++++l a+s++ ++++r+++Glgag
  KHJ31489.1 158 ISFFIAVFDTTIMISSHP-VITSAFE-SSNSASWLSTAFLLTSTGFQPLFGGLSDAVGRKKPLLFCLSILSIAtMWCAL-AQSMTSFIIARAFCGLGAG 253
                 778888888888888888.*******.9999******************************999999999999455555.677779************* PP

       MFS_1 101 alfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee........... 188
                 +l++++ ++i+d++p e r+ + ++++++f++G++ g++lgg++a+slgWr+ f i  + ++l++      + + p+  +  +  + +           
  KHJ31489.1 254 GLISLSSIVISDLVPIEIRSIYQSYINVAFGVGSASGAALGGWIADSLGWRWEFGIQIPTLVLCLC---TAYIAIPSYLGLTEANKNKsllqalkefdy 349
                 *************************************************************99944...3333333333333333333355666789** PP

       MFS_1 189 ................................................kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlg 239
                                                                 +++ ++p++p  k+++ +p   +++++++l++++ +++ + +p+++q v+ 
  KHJ31489.1 350 kgsilltmtttflilglnlggnilpwknvfvilsliisiilfpyliyvESHTERPILP-PKIMFQNPRA-SIILISCLGSMIAYTIIFNIPIFFQAVML 446
                 **********************************************************.********77.69999999999****************** PP

       MFS_1 240 lsglllaglllallalvgailallagrlsdrlgr.rrrlllallllllaalglallavtssavllllvlvliGfglgfvfpsllalasdlappeeagta 337
                  s + ++gl l ++++v+ +++ l+g+l+  ++r + +l++++l+ +++++++ +l   + a+++l++lv  +fg+gf+ ++++  + ++  + e++ +
  KHJ31489.1 447 ES-ATSSGLRLLVPSVVTSAAGTLVGFLISWTKRmKVFLVIGILFSFVGSIAMSFLRRGWQAWVYLIFLVPTSFGQGFMITTIFMSILSVSLQTEQAVV 544
                 **.8***************************8886777888888888888888888888777777778888********655555555555579***** PP

       MFS_1 338 sglfntagslggalg 352
                 s+ + + +slg+++g
  KHJ31489.1 545 SSTVVLWRSLGTVFG 559
                 ************998 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.42
       MFS_1 238 lglsglllaglllallalvgai 259
                 l+++  + ++++l+l++l++++
  KHJ31489.1 617 LHFT--FASAAVLSLICLLACV 636
                 4444..3333344444444433 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6  12.0   7.5e-16   4.5e-12      10     187 ..     149     319 ..     140     348 .. 0.77
   2 !    6.0  13.6   0.00074       4.4      44     154 ..     448     563 ..     417     570 .. 0.82

  Alignments for each domain:
  == domain 1  score: 45.6 bits;  conditional E-value: 7.5e-16
                 HHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGG CS
    Sugar_tr  10 llfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivg 108
                 ++  + + +i++f+++ ++  +       +s  ess   +++  +fl+ ++  + ++g l+d +GRkk ll++  +++i+++ +a+a+   s+  +i++
  KHJ31489.1 149 FWLIFTVNLISFFIAVFDTTIMISSHPVITSAFESSNSASWLSTAFLLTSTGFQPLFGGLSDAVGRKKPLLFCLSILSIATMWCALAQ---SMTSFIIA 244
                 55555566666666666655555555555555556677788888888888877888888*****************************...9******* PP

                 HHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHH CS
    Sugar_tr 109 RvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllil 187
                 R ++G+g+G+   l+++ is + p ++R++  s+ ++a  +G   +a +g  ++++ +   wr+ +g+q+    +l+++
  KHJ31489.1 245 RAFCGLGAGGLISLSSIVISDLVPIEIRSIYQSYINVAFGVGSASGAALGGWIADSLG---WRWEFGIQIPTL-VLCLC 319
                 ****************************887777777777777766666666666655...*******97554.54444 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.00074
                 ...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHH.HHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS....-SCCHH CS
    Sugar_tr  44 ssvlsglivsiflvGaiiGslfagllgdrfGRkkslli.aavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiA....pkklRg 137
                 s++ sgl + + +v+  + + ++g+l+ +  R k++l+ +++++++g++ + +   +++ +v+++  v + +g G+  +++ m i  ++     + + +
  KHJ31489.1 448 SATSSGLRLLVPSVVTSAAGTLVGFLISWTKRMKVFLViGILFSFVGSIAMSFLRRGWQAWVYLIFLVPTSFGQGFMITTIFMSILSVSlqteQAVVSS 546
                 456789999999**********************99985677789***********************************9999999995554444556 PP

                 HHHHHHHHHHHHHHHHH CS
    Sugar_tr 138 alvslyqlaitfGilva 154
                 ++v +  l+++fG  ++
  KHJ31489.1 547 TVVLWRSLGTVFGVSLS 563
                 66666666666665555 PP

>> HTH_26  Cro/C1-type HTH DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0     1e-05      0.06      14      53 ..      94     133 ..      93     135 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1e-05
      HTH_26  14 seLargtgisaatlsrlvkgkpervsldtLdkiCdaLgct 53 
                  eL+r + ++ +++++  +++p+r+s + L++i +a ++ 
  KHJ31489.1  94 EELQRNSKLTNTQVYGTITEEPRRLSSTSLERIDTAQNIG 133
                 59******************************97777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1101  (0.0614089); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.26s 00:00:00.94 Elapsed: 00:00:00.41
# Mc/sec: 4705.56
//
Query:       KHJ31490.1  [L=1023]
Description: putative subunit of heteropentameric replication factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-59  200.9   0.2    1.2e-59  200.9   0.2    2.4  3  RFC1            Replication factor RFC1 C terminal domain
    1.4e-13   51.1   0.0    5.4e-13   49.1   0.0    2.1  1  BRCT            BRCA1 C Terminus (BRCT) domain
    7.6e-10   39.3   0.0    2.5e-09   37.6   0.0    1.9  1  AAA             ATPase family associated with various cellula
      9e-06   25.7   0.0    2.9e-05   24.1   0.0    1.9  1  Rad17           Rad17 P-loop domain
    0.00015   22.0   0.0    0.00094   19.5   0.0    2.3  1  AAA_22          AAA domain
    0.00096   19.0   0.0     0.0051   16.6   0.0    2.4  2  DNA_pol3_delta  DNA polymerase III, delta subunit
      0.004   17.2   0.0      0.017   15.1   0.0    2.2  1  AAA_14          AAA domain
     0.0046   17.5   1.9      0.016   15.8   0.0    2.9  3  AAA_18          AAA domain
     0.0053   16.9   0.0      0.018   15.2   0.0    1.9  1  AAA_33          AAA domain
  ------ inclusion threshold ------
       0.01   16.3   0.1      0.066   13.6   0.1    2.2  2  AAA_16          AAA ATPase domain
      0.013   15.4   0.0       0.99    9.3   0.0    2.6  2  NACHT           NACHT domain
      0.035   13.8   0.0      0.096   12.4   0.0    1.7  1  RuvB_N          Holliday junction DNA helicase RuvB P-loop do
      0.055   13.2   0.0       0.17   11.6   0.0    1.8  1  AAA_30          AAA domain
      0.073   13.3   0.0       0.34   11.1   0.0    2.2  1  AAA_28          AAA domain
        0.1   13.0   0.3       0.57   10.6   0.1    2.6  1  RNA_helicase    RNA helicase
       0.13   12.2   0.0        0.6   10.1   0.0    2.3  1  PTCB-BRCT       twin BRCT domain
        3.5    8.1   6.8        1.6    9.1   0.0    3.3  3  AAA_17          AAA domain


Domain annotation for each model (and alignments):
>> RFC1  Replication factor RFC1 C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1       7.7   8.1e+03     126     156 ..     194     226 ..     185     227 .. 0.63
   2 ?   -1.9   0.0       3.2   3.4e+03      92     122 ..     641     671 ..     637     672 .. 0.82
   3 !  200.9   0.2   1.2e-62   1.2e-59       1     157 []     764     917 ..     764     917 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 7.7
                 -X....XXX.XXXXXXXXXXXXXXXXXXXXXXX CS
        RFC1 126 elslv.kge.kkkedplkkidtkvKaaftrkyn 156
                  ls   k++  ++ d  k+i+++vK +  ++++
  KHJ31490.1 194 PLSELdKNHqFSDVDNSKEISNSVKQKCSKSLR 226
                 444443333356677788999999999888765 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 3.2
                 HHS---------HHHHHHTTT--SHHHHHHH CS
        RFC1  92 lvkpLkeegkdgveevielmdeysLtkedvd 122
                 +++ L e +++ + ++i+++++ +L +  +d
  KHJ31490.1 641 VMDALIEGSNKDIRQIINMISAVKLDQSSMD 671
                 567888866677**********999988776 PP

  == domain 3  score: 200.9 bits;  conditional E-value: 1.2e-62
                 HHHHHHHHHHHTT.SS-GGGHHHHHHHHTHHHHHTT-EE-SS-----SHHHHHHHHHHHHHHHHHHHTTTTT------HHHHHTTTHHHHHHHHS---- CS
        RFC1   1 isdgDlvdkkirs.eqnWsLlpthavlssvlPaslvrgslegrisFpswLGknSktnKnkRllqelqshlrlktsaskselrldylpllkkklvkpLke 98 
                 isdgDlvd++i++ +q+WsL+ptha++s+v+Pas+v+g+++gr +F++wLG+nSk++K +R+++e+qsh+rl+ts++k+ +r++y+p+l+ +++k+L++
  KHJ31490.1 764 ISDGDLVDRMIHGsQQQWSLMPTHAIFSTVRPASFVAGQMAGRSTFTQWLGNNSKMQKLSRYVREIQSHMRLRTSCDKHVIRQQYMPVLWAETIKRLEQ 862
                 9************************************************************************************************** PP

                 -----HHHHHHTTT--SHHHHHHHHHH-X...XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        RFC1  99 egkdgveevielmdeysLtkedvdslvelslvkgekkkedplkkidtkvKaaftrkynk 157
                 egk+ v+evi+lmd+y+Ltk+d+d+++el ++  ++++e++  +i++++Ka+ftr yn+
  KHJ31490.1 863 EGKECVDEVIDLMDSYYLTKDDFDNIMELGVG--PHNSEKI--NIESQTKATFTRLYNS 917
                 *****************************666..5565666..**************95 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.1   0.0   5.1e-16   5.4e-13       2      79 .]     291     367 ..     290     367 .. 0.98

  Alignments for each domain:
  == domain 1  score: 49.1 bits;  conditional E-value: 5.1e-16
                 TTTTTTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHHH CS
        BRCT   2 kellfhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgepesrslkylealklnipivheewlldci 79 
                 ke++++g++fv+tg ld+  r+e++el+k +GGkvt + s+kt+++v g++ ++ +k+ + ++l  ++++e+ l+++i
  KHJ31490.1 291 KENCLSGLNFVFTGLLDTLAREEAQELVKRYGGKVTIAPSRKTSFVVLGND-AGPSKLRKIKELSLKTINEDGLFELI 367
                 689************************************************.***********************987 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.0   2.4e-12   2.5e-09       1      74 [.     488     572 ..     488     601 .. 0.72

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 2.4e-12
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSS.....STTHHHHHHHHHHHHHHHTS......TSEEEEEETGGGHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellsk.....yvgesekkirelfkeakeka......kpsilfiDEidalaksr 74 
                 ++++GppG+GKT++a+  ak +g +++e ++s+ +sk      +g+ +++ + +   a +++      k+ +l++DE+d + + +
  KHJ31490.1 488 IIIHGPPGIGKTTAAHLAAKLTGYDIIESNASDTRSKklvetGLGDVMDNYSLYGFFAGQNKnvneqkKKIVLIMDEVDGMSSGD 572
                 589********************************777888844444444333222222222245664569*********97665 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   2.8e-08   2.9e-05       6      81 ..     434     520 ..     430     563 .. 0.80

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 2.8e-08
       Rad17   6 nelWfekykPekaeelavhkkkieevkewlk....advLesrkkr.........iLLisGPsGCgkstvvkvLskelgiklrewlnpvs 81 
                  +lW  +y P  ++++   k  +e+++ wlk    a+    ++ +          ++i GP+G gk+t+ +  +k  g++++e  n+  
  KHJ31490.1 434 SQLWTTRYAPTSMNQICGNKAAVEKIQSWLKgwptAHKYGFQR-KgqdglggyrAIIIHGPPGIGKTTAAHLAAKLTGYDIIES-NASD 520
                 689***************************9333223322222.135899999899************************9984.4444 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   8.9e-07   0.00094       6     133 ..     486     599 ..     482     602 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 8.9e-07
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalraravielliiDEaqhlr 104
                 + ++++G++G+GKTt +   ++           + ++++ +++    sk+l +  l ++ +     + s+  +++  ++++++++++ +li DE++ + 
  KHJ31490.1 486 RAIIIHGPPGIGKTTAAHLAAKLT---------GYDIIESNASDTR-SKKLVETGLGDVMD-----NYSLYGFFAGQNKNVNEQKKKIVLIMDEVDGM- 568
                 679*************99999998.........9999999998888.77776666666662.....368999999999999999999***********. PP

      AAA_22 105 s...eealeeLrsllnlsrkgvqliLvGtp.el 133
                 s      +  L ++ +  ++++++iL+    +l
  KHJ31490.1 569 SsgdRGGVVALAQMCK--KTDIPMILICNDrKL 599
                 4456666666667788..9******99766555 PP

>> DNA_pol3_delta  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   4.8e-06    0.0051      81     172 ..     577     663 ..     554     665 .. 0.80
   2 ?   -3.7   0.0       8.1   8.6e+03      77     101 ..     816     840 ..     814     862 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 4.8e-06
                     HHHHHHTTT--SSEEEEEEES.S--HHHHHHHHHTTTEEEEEE----TTTHHHHHHHHHHHTT-EE-HHHHHHHHHHHTT-HHHHHHHHHHH CS
  DNA_pol3_delta  81 keLeeylsnlpedtlLiliapkklderkklvklLkkkatvveaktlkeeelkkwiqkraqelglkiekealelLlelvennlsaikqelekL 172
                      +L ++ ++  +d+ +ili++   d++ + +k ++  +  + + +++ ++++  i+ +++++glki + +++ L+e ++ ++++i + +  +
      KHJ31490.1 577 VALAQMCKK--TDIPMILICN---DRKLQKMKPFDFVTYDIPFRRPSVDQVRSRIATICHREGLKIPPNVMDALIEGSNKDIRQIINMISAV 663
                     555566655..7888999999...778888888888888899********************************************998765 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 8.1
                     TTHHHHHHHHTTT--SSEEEEEEES CS
  DNA_pol3_delta  77 ekllkeLeeylsnlpedtlLiliap 101
                      +++++L++y+ +++ ++ L   + 
      KHJ31490.1 816 NSKMQKLSRYVREIQSHMRLRTSCD 840
                     5788999999999999988865555 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.6e-05     0.017       3      74 ..     486     566 ..     484     585 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.6e-05
      AAA_14   3 kilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpe........kllelileklke......ekktylflDEiq 74 
                 ++++i G+  +GKTt ++  + +l     +i++ n  d r kkl ++         +l+ ++  +  +      +kk +l++DE+ 
  KHJ31490.1 486 RAIIIHGPPGIGKTTAAHLAA-KLT--GYDIIESNASDTRSKKLVETGlgdvmdnySLYGFFAGQ--NknvneqKKKIVLIMDEVD 566
                 789*************76665.554..59*********999876644344333333444444444..134777788889*****96 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       5.1   5.4e+03      29      29 ..     186     186 ..     121     247 .. 0.59
   2 !   15.8   0.0   1.5e-05     0.016       1      44 [.     488     538 ..     488     597 .. 0.69
   3 ?   -1.6   0.0       3.5   3.7e+03      60      66 ..     856     862 ..     803     913 .. 0.49

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 5.1
      AAA_18  29 r 29 
                 +
  KHJ31490.1 186 K 186
                 2 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 1.5e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.......gvnlrdvakenglllevdpe 44 
                 I++ G+pG GKtt a+  +k++g+       ++  ++ + e gl +  d++
  KHJ31490.1 488 IIIHGPPGIGKTTAAHLAAKLTGYdiiesnaSDTRSKKLVETGLGDVMDNY 538
                 99******************9999999888833333333333444444444 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 3.5
      AAA_18  60 lldalee 66 
                  ++ le+
  KHJ31490.1 856 TIKRLEQ 862
                 2222222 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.7e-05     0.018       2      32 ..     488     518 ..     488     571 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.7e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdt 32 
                 ++++G+pG GK+t a+  +k +g+ +++s++
  KHJ31490.1 488 IIIHGPPGIGKTTAAHLAAKLTGYDIIESNA 518
                 689***********99777666688888776 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   6.2e-05     0.066      23      46 ..     484     507 ..     474     524 .. 0.80
   2 ?   -2.1   0.0       4.2   4.4e+03     132     149 ..     554     570 ..     539     592 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 6.2e-05
      AAA_16  23 rpelvllsGesGvGKsslvrellr 46 
                 + ++++++G++G+GK++ +  +++
  KHJ31490.1 484 GYRAIIIHGPPGIGKTTAAHLAAK 507
                 3399*************9977664 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 4.2
      AAA_16 132 rderplvlvlDdlqwade 149
                 + ++++vl++D+++   +
  KHJ31490.1 554 Q-KKKIVLIMDEVDGMSS 570
                 4.455*******995554 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00094      0.99       1      18 [.     486     503 ..     486     514 .. 0.83
   2 ?    3.1   0.0     0.073        77      75     133 ..     550     600 ..     540     605 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00094
                 SCEEEEC-TTTCHHHHHH CS
       NACHT   1 rlvilqGeaGsGKTtLlq 18 
                 r +i++G++G+GKTt ++
  KHJ31490.1 486 RAIIIHGPPGIGKTTAAH 503
                 579***********9764 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.073
                 HHCCSCCCEEEEEE-STT-SS-TCH.........HHHHHCTTTTT--EEEEEEECCCHH CS
       NACHT  75 vllelperlLlilDglDelvtdlgqkekqpvrtlLselirkkllpeasllltvrpralr 133
                 ++ e++++++li+D +D +++ ++        + L+++++k   +  +++l++  r+l+
  KHJ31490.1 550 NVNEQKKKIVLIMDEVDGMSSGDRG-----GVVALAQMCKK---TDIPMILICNDRKLQ 600
                 56799**************985544.....66667777777...555666666666555 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   9.1e-05     0.096      36      61 ..     488     513 ..     480     529 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 9.1e-05
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvkl 61 
                 ++++GpPG+Gktt a++ ak  g ++
  KHJ31490.1 488 IIIHGPPGIGKTTAAHLAAKLTGYDI 513
                 899*************9998777665 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00016      0.17      19     121 ..     486     592 ..     481     604 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00016
      AAA_30  19 rvavltGpAGtGKttalkalreaweaaggrvi.glAptgkaAkvLaeelg..ieastiakllkrlk.grarlepgtllivDEagmvdtkq...laallk 110
                 r  +++Gp+G GKtta   ++++    g+++i   A+  +  k ++++lg  ++ +++  +   ++ + ++ +++ +li DE+  +++ +   + al++
  KHJ31490.1 486 RAIIIHGPPGIGKTTAAHLAAKLT---GYDIIeSNASDTRSKKLVETGLGdvMDNYSLYGFFAGQNkNVNEQKKKIVLIMDEVDGMSSGDrggVVALAQ 581
                 6789***********977766654...677773556666666667777774446666666665544544455566899999986665554011444455 PP

      AAA_30 111 aaekagakvil 121
                  ++k+++ +il
  KHJ31490.1 582 MCKKTDIPMIL 592
                 55555555555 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00033      0.34       2      37 ..     488     524 ..     487     563 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00033
      AAA_28   2 ivitGgestGKTtlleaLaar..gypvvpEaareilee 37 
                 i+i G+++ GKTt + +Laa+  gy +++  a +  ++
  KHJ31490.1 488 IIIHGPPGIGKTTAA-HLAAKltGYDIIESNASDTRSK 524
                 99**********975.6777668999997666555444 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00054      0.57       1      23 [.     488     509 ..     488     602 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00054
  RNA_helicase   1 iwlyGpsgeGKStlakeLakall 23 
                   i+++Gp+g+GK+t+a+  a++l+
    KHJ31490.1 488 IIIHGPPGIGKTTAAHL-AAKLT 509
                   789**********9987.66665 PP

>> PTCB-BRCT  twin BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00057       0.6       6      60 ..     303     359 ..     298     361 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00057
                 ECB-TTC.HHHHHHHHHHTT-EEESSEETT-SEEEE.CSS-CHHHHHHHHCT-EEE- CS
   PTCB-BRCT   6 tgysgdd.rkslqklieamGaeyskdltksvTHLic.ksgeGekyekAkkwgipvVs 60 
                 tg+ ++  r+++q+l+++ G++++   ++++ +++  +++  +k +k k+  +++++
  KHJ31490.1 303 TGLLDTLaREEAQELVKRYGGKVTIAPSRKTSFVVLgNDAGPSKLRKIKELSLKTIN 359
                 55555556***************************9777777888888877777765 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       3.1   3.2e+03      41      74 ..     151     188 ..     140     216 .. 0.74
   2 ?   -0.0   1.0       1.1   1.1e+03      33      82 ..     379     426 ..     374     441 .. 0.67
   3 ?    9.1   0.0    0.0016       1.6       2      39 ..     492     531 ..     491     607 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 3.1
                 SSHHHHCTSHHHHHHHHHHHHHHHHHHHH....HSSEE CS
      AAA_17  41 kardemrklpleekkelqkeaaekiaeea....kkkgv 74 
                 k+ ++ + ++++ekk l k++  ki++ +    ++k+v
  KHJ31490.1 151 KDGENTKIADNDEKKNLSKLLDSKIQDSKsslsGRKDV 188
                 45566667888999999999999998876444344444 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 1.1
                 HHHTTTSHSSHHHHCTSHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-SEE CS
      AAA_17  33 eakrgglakardemrklpleekkelqkeaaekiaeeakkkgvlvdghpri 82 
                 ea+++   k+++em k ++e  + + ke +++i+e++  +++   g p +
  KHJ31490.1 379 EAEKNTI-KKNQEMIKIKKE-AENMAKEEKRRIEEAEMMRKAKSHGTPIT 426
                 5555555.666677777644.45577777888888776666666666655 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.0016
                 E-TTSSHHHHHHHHHHHHTEEEE..EHHHHHHHHHHTTTS CS
      AAA_17   2 GgPGsGKgtqceklvekygfthl..saGdllreeakrggl 39 
                 G+PG GK+t++   ++  g+ ++  +a+d   +   + gl
  KHJ31490.1 492 GPPGIGKTTAAHLAAKLTGYDIIesNASDTRSKKLVETGL 531
                 9**********55555558888744567766666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1023 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1788  (0.0997267); expected 358.6 (0.02)
Passed bias filter:                      533  (0.0297284); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.85u 0.27s 00:00:01.12 Elapsed: 00:00:00.46
# Mc/sec: 6726.32
//
Query:       KHJ31491.1  [L=222]
Description: putative ribosomal protein l16p l10e [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.3e-30  105.3   0.1    2.8e-30  105.0   0.1    1.1  1  Ribosomal_L16  Ribosomal protein L16p/L10e


Domain annotation for each model (and alignments):
>> Ribosomal_L16  Ribosomal protein L16p/L10e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.0   0.1   1.6e-34   2.8e-30       7     132 .]      61     189 ..      55     189 .. 0.92

  Alignments for each domain:
  == domain 1  score: 105.0 bits;  conditional E-value: 1.6e-34
                    BSSSX...XSSTSXXXSXXXXXESXEEEEES.SXEEEEHHHHHHHHHHHCTCCCCTSXC.EEXXSXXXXEEEEE-SS-TTTSSSSXEEEEEEEEEX CS
  Ribosomal_L16   7 rKsrk...ryirgvstkgtklefgdygLval.ekgqltaealeaariainrylkkkrgk.klwirvfphhpvtkkagedRmgkGkGkpegwvarvk 97 
                    +Ksrk   ++ +g s++gt++ +gd+gL+   ++ ++ ++ l+ ++ ai+ +lk   ++ +l+ rv++++ v  k++e+RmgkGkG++++w  rv 
     KHJ31491.1  61 KKSRKgrpHVATGGSSRGTTIMWGDFGLRLSdHHRRIPSSSLKIGEDAIKVRLK--GMRyRLYKRVCANIGVYTKGNEVRMGKGKGSFDHWTSRVA 154
                    44444556999*****************9887999*******************..44469*********************************** PP

                    SSCEEEEETTXXXSHHHHHHHHHHHHTSSSXEEEE CS
  Ribosomal_L16  98 igqiifeikagvneeiakealrraasKlpiktkiv 132
                    + +iife+k++++e++a++a+r+a +K+p+k+++v
     KHJ31491.1 155 VSRIIFELKGDIHEQVARDAFRLAGNKMPGKYEFV 189
                    ********888**********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       217  (0.0121033); expected 358.6 (0.02)
Passed bias filter:                      207  (0.0115455); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.20s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1723.99
//
Query:       KHJ31492.1  [L=786]
Description: putative phosphoribosylformylglycinamidine cyclo-ligase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.5e-84  281.1   0.0    6.7e-84  280.5   0.0    1.3  1  GARS_A           Phosphoribosylglycinamide synthetase, ATP-gr
    2.7e-37  128.3   0.0    5.6e-37  127.3   0.0    1.5  1  AIRS_C           AIR synthase related protein, C-terminal dom
    1.4e-33  115.5   0.4    5.8e-33  113.5   0.0    2.3  2  GARS_N           Phosphoribosylglycinamide synthetase, N doma
    1.8e-25   89.0   0.2    5.2e-25   87.5   0.2    1.9  1  GARS_C           Phosphoribosylglycinamide synthetase, C doma
    5.4e-15   55.8   0.8    1.6e-14   54.3   0.8    1.9  1  AIRS             AIR synthase related protein, N-terminal dom
    8.3e-07   28.7   0.1    1.9e-06   27.5   0.1    1.6  1  CPSase_L_D2      Carbamoyl-phosphate synthase L chain, ATP bi
    5.2e-06   26.2   0.0    1.4e-05   24.8   0.0    1.6  2  ATP-grasp        ATP-grasp domain
    1.6e-05   25.0   0.0    5.9e-05   23.2   0.0    2.0  1  ATP-grasp_3      ATP-grasp domain
     0.0049   16.5   0.1     0.0092   15.6   0.1    1.4  1  ATP-grasp_4      ATP-grasp domain
     0.0086   15.7   0.0       0.02   14.5   0.0    1.5  1  ATP-grasp_2      ATP-grasp domain
  ------ inclusion threshold ------
      0.032   13.5   0.0      0.096   11.9   0.0    1.7  2  ATPgrasp_ST      Sugar-transfer associated ATP-grasp
      0.047   13.2   0.0       0.17   11.4   0.0    1.9  2  Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
        0.1   12.9   0.2       0.24   11.7   0.2    1.6  1  Cauli_VI         Caulimovirus viroplasmin


Domain annotation for each model (and alignments):
>> GARS_A  Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  280.5   0.0   4.8e-87   6.7e-84       1     194 []     107     299 ..     107     299 .. 1.00

  Alignments for each domain:
  == domain 1  score: 280.5 bits;  conditional E-value: 4.8e-87
                 HBHHHHHHHHHHTT--B--EEEESSHHHHHHHHHHHSSSEEEEEESC-GGGT-EEEESSHHHHHHHHHHHCTS-TTCCCCSSEEEEE---SEEEEEEEE CS
      GARS_A   1 asKsfakdllkkagiptaeyeaftdpeeakeyieeatakalVvKadglaagKgvivakseeealkavkeilekkkfGeagekvviEelleGeEvsllal 99 
                 +sK+f+kd++k+++ipta+y++f++ +eak+y+e++t ++ V+Ka+gla+gKgvi+++s++ea++a+++i+ +++fG+ag++vviEe+leGeE+s+l++
  KHJ31492.1 107 GSKTFSKDFMKRHNIPTARYKNFSNFDEAKKYLETVTYNV-VIKASGLAGGKGVIIPNSKSEACTALEKIMLHEEFGSAGKEVVIEEFLEGEELSILTF 204
                 69**************************************.********************************************************** PP

                 ECTTEEEE---BEEEEEEECCCEEEEECECEEEES-TTS-HHHHHHHHHHTHHHHHHHHHCTT---EEEEEEEEEEETTEEEEEEEESS--TTCH CS
      GARS_A 100 vdgktvkplplaqdhkrvlegDkgpnTGGmGayspapvvteellekikeeileptveglkkegipfkGvLyaglmlvedgpkvlefnvRfgDpet 194
                 +dg+++k+lp+aqdhkr+++gD+gpnTGGmG+y+p+ v+t +l+++i+ +ilept+ g+++e+ pf+G L++glm++++gpkvle+nvRfgDpet
  KHJ31492.1 205 SDGYSFKSLPPAQDHKRIFDGDQGPNTGGMGCYAPTKVATSDLIKEIERKILEPTISGMRNEKFPFRGTLFTGLMITKTGPKVLEYNVRFGDPET 299
                 **********************************************************************************************8 PP

>> AIRS_C  AIR synthase related protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.3   0.0   4.1e-40   5.6e-37       2     152 ..     609     775 ..     609     778 .. 0.97

  Alignments for each domain:
  == domain 1  score: 127.3 bits;  conditional E-value: 4.1e-40
                 TTEEEEEEETSSCTCCHHHHHHHCHHHCTSHTT.......TSE.HHHHHHHHHHHHHHHHHHHH.HTTECEEEE--TTHHHHHHHHHHHTTTEEEEEEC CS
      AIRS_C   2 pGdvliltgslGlggagtslkrkileeegldds.......avq.lgdvlleptliyvkralaal.kglvkaahDvTgGGLlgalaemapasgvgaeidl 91 
                 +Gd+li+++s G++++g+sl+r+i+e+e+l ++       +++ +gd ll+pt+iyv+ +l    k+l+k++ ++TgGGL++++++m+p + ++a++d+
  KHJ31492.1 609 AGDLLIGIASVGIHSNGYSLVRRIVERESLLYDkdfapwdNSKlIGDSLLTPTRIYVNSILQITnKKLIKGLSHITGGGLTENIPRMLPPH-LSARVDI 706
                 6*****************************999*******5555**********************************************9.******* PP

                 G...THHHHHHHH.....HHHHHHHCSTTTEEEEEEEHGGH.HHHHHHHHHTTCCCEEEEEEEEESSSEE CS
      AIRS_C  92 d...kvpifdele.....splemllsensGrllvavppeea.davlaileeeglpeaavIGevtakeels 152
                 +   ++pif++l+     s  em++++n G+++v+v+++++ +  ++ile++g+ ++++IG+++a+++++
  KHJ31492.1 707 AcwsQPPIFKWLQktggiSSVEMARTFNNGIGMVVVVSPANlQNTISILEAAGE-KVYEIGTLVARDGKD 775
                 *****************************************9************.7*********99765 PP

>> GARS_N  Phosphoribosylglycinamide synthetase, N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.5   0.0   4.2e-36   5.8e-33       1      90 []       4     106 ..       4     106 .. 0.96
   2 ?   -2.4   0.0       6.1   8.5e+03      47      87 ..     511     552 ..     493     555 .. 0.58

  Alignments for each domain:
  == domain 1  score: 113.5 bits;  conditional E-value: 4.2e-36
                 EEEEEEESSHHHHHHHHHHTTSTTESEEEEEE--CGG..............TTHHHHHHHHHHCTESEEEE-SHHHHHTTHHHHHHHHHT-EEES--CC CS
      GARS_N   1 mkvLvvGsGGRehalawklaqspkvekvyvapgNagt..............edlealvefakeekidlvvvGpeapLvaGvadaleeekgikvfGpske 85 
                 m+vL+vG+G+Reha+awkl+qs +ve+++v+pgN+gt              +d++alv++a+e+ki+lvv+GpeapLv+G++ ++++  gi+++Gpske
  KHJ31492.1   4 MRVLIVGNGSREHAIAWKLSQSARVESIIVVPGNGGTekcvkttnvttvrpDDYKALVALAQEKKINLVVPGPEAPLVDGIEGYFRAV-GISCYGPSKE 101
                 9*************************************999999999998888899*****************************555.********** PP

                 CCHHH CS
      GARS_N  86 aAqlE 90 
                 aA++E
  KHJ31492.1 102 AARME 106
                 ****9 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 6.1
                 HHHCTESEEEE-SHHHHHTTHHHHHHHHH.T-EEES--CCCC CS
      GARS_N  47 akeekidlvvvGpeapLvaGvadaleeek.gikvfGpskeaA 87 
                   + +idlv +  ++ +v+G +  +  +  g++++  +++aA
  KHJ31492.1 511 HDSVGIDLVAMNVNDLIVQGAEPLMFLDYyGCSILNQDSAAA 552
                 344557777777777777776655433334555555555555 PP

>> GARS_C  Phosphoribosylglycinamide synthetase, C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.5   0.2   3.8e-28   5.2e-25       2      80 .]     337     424 ..     336     424 .. 0.96

  Alignments for each domain:
  == domain 1  score: 87.5 bits;  conditional E-value: 3.8e-28
                 EEEEEEETTTTSS--ST-EEBS....TTEEEEESSEE.....EEE-SSEEEEEEEEESSHHHHHHHHHHHHTTCB-TTEE--STTTHH CS
      GARS_C   2 vgvvlaskGYPgsyekgkeitg....egvkvfhagtk.....lvtsGGRvlavvavgetleeArakayeavkkikfeglfyRkDIGar 80 
                 ++vv+a++GYPg+y+kgk i       ++++fhagt+     l tsGGRv+a+ a+ +tl +A + ay++vk +kf+++fyRkDI++r
  KHJ31492.1 337 ATVVIAAGGYPGTYPKGKSIYIqphtPNINLFHAGTTfregqLQTSGGRVIAAQAISDTLGQAVETAYSGVKLVKFDDMFYRKDIAHR 424
                 79******************6699998899******9999999*******************************************97 PP

>> AIRS  AIR synthase related protein, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.3   0.8   1.2e-17   1.6e-14       6      94 .]     492     595 ..     467     595 .. 0.87

  Alignments for each domain:
  == domain 1  score: 54.3 bits;  conditional E-value: 1.2e-17
                 EEEEEEEE.EECCTCCCC....HHHHHHHHHHHHHHTTTEEEEEEEEEEEEC.....HHHHHHHHHHHHHHHTT-EEEEEEEEEESS......EEEEEE CS
        AIRS   6 vvttdshnrpvlvepvhf....iGakavavnlsDlaamGArPlalllslalp.....wleevvrglaeaaeelgvplvgGdtsfsne......ptisvt 89 
                 v ++d++++++++++       +G  +va+n++Dl++ GA+Pl++l+++ ++      ++++++g+a++++e+ ++lvgG+t+++++      + ++ +
  KHJ31492.1 492 VGAIDGVGTKLMIAQAMQkhdsVGIDLVAMNVNDLIVQGAEPLMFLDYYGCSilnqdSAAAFIEGVAAGCREARCALVGGETAEMPDmykpdeYDVAGA 590
                 5567888888888554445667***********************************9*************************9988899999999999 PP

                 EEEEE CS
        AIRS  90 avGlv 94 
                 a+G++
  KHJ31492.1 591 AIGVI 595
                 99985 PP

>> CPSase_L_D2  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.1   1.4e-09   1.9e-06       3      91 ..     110     196 ..     108     202 .. 0.92

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 1.4e-09
                  HHHHHHHHHTT-BBSSEECSSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SS CS
  CPSase_L_D2   3 esakealkkinvpvvpssaapvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkg 91 
                  + +k+ +k+ n+p+++ ++   ++ +ea +  +++ y v+ika+   GGkG  + ++++e   +++k + + +   + k+v +e++l+g
   KHJ31492.1 110 TFSKDFMKRHNIPTARYKNF--SNFDEAKKYLETVTYNVVIKASGLAGGKGVIIPNSKSEACTALEKIMLHEEFGSAGKEVVIEEFLEG 196
                  557889**********9999..****************************************999999999976666799******987 PP

>> ATP-grasp  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   9.8e-09   1.4e-05       2      85 ..     117     206 ..     116     225 .. 0.87
   2 ?   -3.3   0.0       4.1   5.7e+03      41      61 ..     735     755 ..     720     772 .. 0.66

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 9.8e-09
                 HTTT--B-EEEEECCHHHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHC........GTTCEEEEE----SEEEEEEEEEE CS
   ATP-grasp   2 eklglpvprflaveskeeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqaleal........keekvivEefvpfekElsvlvvrs 85 
                 +++++p++r+   ++ +e+++ +e++ + vv+K + +   GkG  + +s++++ +ale +        ++++v++Eef +   Els+l+  +
  KHJ31492.1 117 KRHNIPTARYKNFSNFDEAKKYLETVTYNVVIK-ASGLAGGKGVIIPNSKSEACTALEKImlheefgsAGKEVVIEEFLE-GEELSILTFSD 206
                 689******************************.566678*****************99999****99999*******99.56999998765 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 4.1
                 TTTTEEEECTCCGHHCHHHHC CS
   ATP-grasp  41 dGkGqsvvrseedleqaleal 61 
                 +G G  vv s+++l+++++ l
  KHJ31492.1 735 NGIGMVVVVSPANLQNTISIL 755
                 566777777777777666655 PP

>> ATP-grasp_3  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   4.3e-08   5.9e-05       4     158 ..     109     294 ..     107     297 .. 0.63

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 4.3e-08
                  HHHHHHHHTTT.S---.........-EESS--.......SSSEEEEESS-------B--SS--TTE...................EEEE---SEEEEE CS
  ATP-grasp_3   4 KlktykkLkeagvkvP.....tkleaeeleee.......ekklvvKprdGaggesvrvveekeeaeaaieeve............lvqefieGkplSv 77 
                  K ++ +++k++++++      +     +++e+        +++v+K +  agg++v + + k ea++a+e++             ++ ef+eG++lS+
   KHJ31492.1 109 KTFSKDFMKRHNIPTAryknfS-----NFDEAkkyletvTYNVVIKASGLAGGKGVIIPNSKSEACTALEKIMlheefgsagkevVIEEFLEGEELSI 201
                  6666777777755444555442.....2222233344559******************************99999*********************** PP

                  EEEE.SSSEEEEEEEEEEEE.T.......TEEEEEEES----H....HHHHHHHHHHHHTTST....T--EEEEEEEEESS.SEEEEEEESS- CS
  ATP-grasp_3  78 sllsdgekvlvlavnrqlie.kaeke...fvyaGnvtpietel....keevvelaeevvekle....glaGyvGvDlvlkdeepyviEvNPRl 158
                   + sdg  ++ l   + +   + +++       G+ +p ++      ke  +++ e +++ ++    + +G +   l++++ +p v+E N R+
   KHJ31492.1 202 LTFSDGYSFKSLPPAQDHKRiFDGDQgpnTGGMGCYAPTKVATsdliKEIERKILEPTISGMRnekfPFRGTLFTGLMITKTGPKVLEYNVRF 294
                  *****9988877544433220222224553333444444433311112222222233333332333356666666666777777777777666 PP

>> ATP-grasp_4  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   6.7e-06    0.0092       2      72 ..     143     205 ..     142     211 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 6.7e-06
  ATP-grasp_4   2 slPvviKPsvgffSlGVykinneeewkaavaaieeeleqakeeykeevveeesflvEeyieGeEfavdayf 72 
                   ++vviK s  ++  GV++ n+++e   a+++i      ++ee+      ++++++Ee++eGeE ++  + 
   KHJ31492.1 143 TYNVVIKASGLAGGKGVIIPNSKSEACTALEKIM-----LHEEFG---SAGKEVVIEEFLEGEELSILTFS 205
                  699******************9998777777776.....455555...46899************997665 PP

>> ATP-grasp_2  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   1.4e-05      0.02       7      76 ..     112     176 ..     110     195 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.4e-05
                  HHHHHHCTT----SEEEESSHHHHHHHHHHHTSSSEEEEE--SSSTCCCTTCEEEESSHHHHHHHHHCCT CS
  ATP-grasp_2   7 akeilakygvkvpegevaesaeeaeeaakklgekelvvKaQvlaGGRGKagGvklvkskeeakeaakell 76 
                  +k+ ++++++++++ +  ++ +ea++ ++ +  ++ v+Ka  laGG+G    v + +sk+ea +a ++++
   KHJ31492.1 112 SKDFMKRHNIPTARYKNFSNFDEAKKYLETVTYNV-VIKASGLAGGKG----VIIPNSKSEACTALEKIM 176
                  7999**************************99998.*********985....777777777777776665 PP

>> ATPgrasp_ST  Sugar-transfer associated ATP-grasp
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     7e-05     0.096      21     101 ..     108     182 ..      95     200 .. 0.80
   2 ?   -2.8   0.0       2.1   2.9e+03     245     265 ..     274     293 ..     265     295 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7e-05
  ATPgrasp_ST  21 dKlkfkelalraglkvpkllgvikeqaeiseleafvkeleegvviKpakgsgGkGilviteredqdylkssgksalldele 101
                  +K   k++++r+ +++ +     k+ ++++e++++++ +  +vviK+    gGkG+++ ++  +++  ++ +k +l++e+ 
   KHJ31492.1 108 SKTFSKDFMKRHNIPTAR----YKNFSNFDEAKKYLETVTYNVVIKASGLAGGKGVIIPNS--KSEACTALEKIMLHEEFG 182
                  566677888888777777....56668889999999999888*****************77..677778999999999987 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.1
  ATPgrasp_ST 245 lGwDivldeekgplllElNar 265
                  l + + +++++ p +lE N r
   KHJ31492.1 274 LFTGLMITKTG-PKVLEYNVR 293
                  55667899999.*******87 PP

>> Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00013      0.17       2      89 ..     116     202 ..     115     252 .. 0.78
   2 ?   -2.5   0.0       2.3   3.1e+03      75      97 ..     552     575 ..     546     582 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00013
                      HHHTT--B--EEEEETTHHCH-H-HHHHHHHHHC-SSEEEEESSSSTTTTEEEESSGGGHHHHHHHHHTT-......SCEEEEE--ESEEEEEE CS
  Dala_Dala_lig_C   2 lkaaGlpvvpyvvlekeeakeekkellekveeelgypvfVKpareGSSvGvskveseeelkeaieeafkyd......ekvlvEeaiegreieva 89 
                      +k+  +p++ y+ + + +  +       k  e+++y v++K++ +    Gv   +s++e   a+e+ + ++      ++v++Ee++eg+e+ + 
       KHJ31492.1 116 MKRHNIPTARYKNFSNFDEAK-------KYLETVTYNVVIKASGLAGGKGVIIPNSKSEACTALEKIMLHEefgsagKEVVIEEFLEGEELSIL 202
                      566677777777776554444.......5699***********999999999988888888888877655422222279***********9875 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.3
                      EEEEE--.ESEEEEEEEEETSSCE CS
  Dala_Dala_lig_C  75 vlvEeai.egreievavlgnekle 97 
                       ++E +   +re  +a++g e+ e
       KHJ31492.1 552 AFIEGVAaGCREARCALVGGETAE 575
                      6788877799*********88766 PP

>> Cauli_VI  Caulimovirus viroplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   0.00017      0.24      25      44 .]     119     138 ..     115     138 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00017
    Cauli_VI  25 kgfpgakyKsFktraeAeaf 44 
                 +++p a+yK F++++eA+++
  KHJ31492.1 119 HNIPTARYKNFSNFDEAKKY 138
                 6899*************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (786 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.38
# Mc/sec: 6146.45
//
Query:       KHJ31493.1  [L=1008]
Description: putative ring finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.3e-07   29.1   4.8    7.3e-07   29.1   4.8    4.4  5  zf-RING_UBOX  RING-type zinc-finger
    7.4e-07   28.9   5.4    7.4e-07   28.9   5.4    5.5  6  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    1.1e-06   28.3   3.9    1.1e-06   28.3   3.9    5.1  6  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    1.2e-05   24.9   0.0    3.4e-05   23.4   0.0    1.8  1  SH3_1         SH3 domain
    2.3e-05   24.1   1.6    2.8e-05   23.9   0.0    2.0  3  SH3_9         Variant SH3 domain
    0.00019   21.7   9.8    0.00019   21.7   9.8    5.2  4  zf-RING_2     Ring finger domain
    0.00025   21.0   4.2    0.00025   21.0   4.2    5.6  5  zf-RING_5     zinc-RING finger domain
    0.00027   20.7   0.5    0.00027   20.7   0.5    4.3  5  zf-RING_6     zf-RING of BARD1-type protein
     0.0036   17.0   0.0     0.0098   15.6   0.0    1.8  1  SH3_2         Variant SH3 domain
     0.0099   16.0   5.5     0.0099   16.0   5.5    4.9  4  zf-C3HC4_4    zinc finger of C3HC4-type, RING


Domain annotation for each model (and alignments):
>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   4.8   4.1e-10   7.3e-07       1      39 []      16      69 ..      16      69 .. 0.77
   2 ?   -3.6   1.9       6.9   1.2e+04       1      24 [.     583     597 ..     583     609 .. 0.45
   3 ?   -4.5   4.2        10   1.8e+04      19      26 ..     669     677 ..     669     689 .. 0.72
   4 ?   -3.6   1.8       6.9   1.2e+04      20      25 ..     695     700 ..     695     710 .. 0.76
   5 ?   -2.9   0.2       4.2   7.5e+03      21      28 ..     776     784 ..     774     794 .. 0.63

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 4.1e-10
  zf-RING_UBOX  1 CpIClelftdP.lvlpCGHtFCreCl.....w.........elskslegafkCP 39
                  C+IC e +  P ++l C HtFC +Cl     w         ++ +    +f+CP
    KHJ31493.1 16 CTICTEILYAPqTLLDCLHTFCGSCLkkwfsWqydswkntpQSLPATASKFTCP 69
                  ********9**8667***********9966634444466666777777777776 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 6.9
  zf-RING_UBOX   1 CpICl.elft..dPlvlpCGHtFCreC 24 
                   C IC    ++               +C
    KHJ31493.1 583 CKICSkGNYNicL------------PC 597
                   6666622443332............22 PP

  == domain 3  score: -4.5 bits;  conditional E-value: 10
  zf-RING_UBOX  19 tFCreCl.w 26 
                   tFC +C  w
    KHJ31493.1 669 TFCANCHiW 677
                   899999765 PP

  == domain 4  score: -3.6 bits;  conditional E-value: 6.9
  zf-RING_UBOX  20 FCreCl 25 
                   FC +C+
    KHJ31493.1 695 FCNNCV 700
                   9****9 PP

  == domain 5  score: -2.9 bits;  conditional E-value: 4.2
  zf-RING_UBOX  21 CreClw.el 28 
                   C +C+  ++
    KHJ31493.1 776 CFSCISsTS 784
                   999*93233 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   5.4   4.1e-10   7.4e-07       1      41 []      16      71 ..      16      71 .. 0.93
   2 ?   -2.8   3.4       3.4   6.1e+03      22      41 .]     567     586 ..     566     588 .. 0.89
   3 ?   -3.6   0.1       6.1   1.1e+04      21      27 ..     593     599 ..     590     600 .. 0.77
   4 ?   -7.9   6.8        10   1.8e+04      21      41 .]     670     688 ..     669     689 .. 0.55
   5 ?   -3.3   3.0       4.8   8.7e+03      21      28 ..     695     702 ..     694     707 .. 0.85
   6 ?   -2.8   4.8       3.5   6.2e+03      22      41 .]     776     797 ..     760     807 .. 0.67

  Alignments for each domain:
  == domain 1  score: 28.9 bits;  conditional E-value: 4.1e-10
                -TTT-S--SS-E.E-TTS--B-CHHHHHHHHC...............TSSB--TTT CS
    zf-C3HC4  1 CpiCleeakepnelleCkHsfCskCirkilks...............rkkvkCPlC 41
                C iC+e +  p++ll+C H+fC +C++k+ +                 +k++CP C
  KHJ31493.1 16 CTICTEILYAPQTLLDCLHTFCGSCLKKWFSWqydswkntpqslpatASKFTCPAC 71
                *****************************998889999999999998888889999 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 3.4
                 -CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4  22 CskCirkilksrkkvkCPlC 41 
                 C  C + +++++ +++C +C
  KHJ31493.1 567 CARCGKDHIEYEWHYNCKIC 586
                 99999999999999999998 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 6.1
                 B-CHHHH CS
    zf-C3HC4  21 fCskCir 27 
                 +C +C+r
  KHJ31493.1 593 ICLPCYR 599
                 6999986 PP

  == domain 4  score: -7.9 bits;  conditional E-value: 10
                 B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4  21 fCskCirkilksrkkvkCPlC 41 
                 fC +C    ++   +  C +C
  KHJ31493.1 670 FCANCHIWTNE--CYWRCNIC 688
                 78888553333..45556555 PP

  == domain 5  score: -3.3 bits;  conditional E-value: 4.8
                 B-CHHHHH CS
    zf-C3HC4  21 fCskCirk 28 
                 fC++C+ +
  KHJ31493.1 695 FCNNCVNQ 702
                 9****975 PP

  == domain 6  score: -2.8 bits;  conditional E-value: 3.5
                 -CHHHHHHHHC..TSSB--TTT CS
    zf-C3HC4  22 CskCirkilks..rkkvkCPlC 41 
                 C++Ci++   s   ++  C +C
  KHJ31493.1 776 CFSCISSTSVShsGNYDVCINC 797
                 8888877666653344447766 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   3.9   6.3e-10   1.1e-06       2      31 ..      16      45 ..      15      49 .. 0.94
   2 ?   -2.1   0.3         2   3.7e+03      34      40 .]      64      71 ..      60      71 .. 0.75
   3 ?   -2.7   1.4       3.1   5.6e+03      20      27 ..     580     587 ..     578     598 .. 0.63
   4 ?   -5.5   4.8        10   1.8e+04      21      30 ..     669     678 ..     668     688 .. 0.58
   5 ?   -4.0   3.9       8.1   1.4e+04      21      29 ..     694     702 ..     684     708 .. 0.71
   6 ?   -3.2   3.3       4.4     8e+03      21      29 ..     774     782 ..     759     799 .. 0.64

  Alignments for each domain:
  == domain 1  score: 28.3 bits;  conditional E-value: 6.3e-10
  zf-C3HC4_2  2 CpiCldmlkdpsvvtpCgHvfCqkCilrsL 31
                C+iC + l+ p ++  C H+fC +C++++ 
  KHJ31493.1 16 CTICTEILYAPQTLLDCLHTFCGSCLKKWF 45
                ***************************986 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2
  zf-C3HC4_2 34 kn.eCPlC 40
                ++  CP C
  KHJ31493.1 64 SKfTCPAC 71
                4559**99 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 3.1
  zf-C3HC4_2  20 HvfCqkCi 27 
                 H  C+ C 
  KHJ31493.1 580 HYNCKICS 587
                 55555553 PP

  == domain 4  score: -5.5 bits;  conditional E-value: 10
  zf-C3HC4_2  21 vfCqkCilrs 30 
                 +fC++C   +
  KHJ31493.1 669 TFCANCHIWT 678
                 6999997655 PP

  == domain 5  score: -4.0 bits;  conditional E-value: 8.1
  zf-C3HC4_2  21 vfCqkCilr 29 
                 +fC++C+ +
  KHJ31493.1 694 GFCNNCVNQ 702
                 477777765 PP

  == domain 6  score: -3.2 bits;  conditional E-value: 4.4
  zf-C3HC4_2  21 vfCqkCilr 29 
                  +C +Ci  
  KHJ31493.1 774 YHCFSCISS 782
                 367777765 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   1.9e-08   3.4e-05       9      48 .]     945     982 ..     942     982 .. 0.93

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 1.9e-08
                 SSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEEG CS
       SH3_1   9 eesdELsfkkGDviivleksedgWwkgrlkgtgkeGliPs 48 
                 +++dEL f +G +i+ +++++++W+ g ++  g++Gl+P+
  KHJ31493.1 945 SNDDELFFPRGAEITECKDVNGDWFHGTYM--GRQGLFPA 982
                 579***************************..69*****6 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       5.6     1e+04      37      45 ..     516     524 ..     513     524 .. 0.80
   2 ?   -4.0   0.6       8.1   1.5e+04      28      42 ..     679     695 ..     678     696 .. 0.73
   3 !   23.9   0.0   1.6e-08   2.8e-05       9      48 ..     946     985 ..     943     986 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 5.6
       SH3_9  37 tGrtGlvPa 45 
                 ++++GlvP+
  KHJ31493.1 516 SSEKGLVPS 524
                 6799****6 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 8.1
       SH3_9  28 edgWlegs..ltGrtGl 42 
                 ++ ++++   ++G +G+
  KHJ31493.1 679 NECYWRCNicNDGDWGF 695
                 66688887567999997 PP

  == domain 3  score: 23.9 bits;  conditional E-value: 1.6e-08
       SH3_9   9 eddeLsLqrGDvitvieesedgWlegsltGrtGlvPanyv 48 
                 +ddeL ++rG  it  ++ +++W+ g++ Gr Gl+Pan v
  KHJ31493.1 946 NDDELFFPRGAEITECKDVNGDWFHGTYMGRQGLFPANHV 985
                 89************************************87 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   9.8     1e-07   0.00019       2      44 .]      15      72 ..      14      72 .. 0.83
   2 ?    2.8   1.1     0.087   1.6e+02       2      35 ..     582     609 ..     581     613 .. 0.72
   3 ?  -12.2  14.8        10   1.8e+04      39      43 ..     683     688 ..     666     710 .. 0.45
   4 ?    0.3   7.0       0.5     9e+02       2      43 ..     759     797 ..     758     798 .. 0.67

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 1e-07
   zf-RING_2  2 eCpICleelssadsvlllpCgHvfhreClerwlrssst.................CPlCr 44
                +C+IC+e l  a ++ll +C H+f+ +Cl++w+  +                   CP+Cr
  KHJ31493.1 15 TCTICTEILY-APQTLL-DCLHTFCGSCLKKWFSWQYDswkntpqslpataskftCPACR 72
                7****86665.555554.5*************888777788888899************9 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.087
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlr 35 
                 +C IC     +++  ++lpC +  +r C ++wl 
  KHJ31493.1 582 NCKICS----KGNYNICLPC-YRAGRGC-QHWLG 609
                 6****4....4444455689.7899999.89986 PP

  == domain 3  score: -12.2 bits;  conditional E-value: 10
   zf-RING_2  39 t.CPlC 43 
                   C +C
  KHJ31493.1 683 WrCNIC 688
                 233333 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.5
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerw.lrssst...CPlC 43 
                  C IC  +++  ++++     H+  ++C++   + +s +   C +C
  KHJ31493.1 759 RCDICRYPIQH-SQTR-Y---HC--FSCISSTsVSHSGNydvCINC 797
                 6****999964.3333.2...53..599977535555558999998 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   4.2   1.4e-07   0.00025       2      43 ..      16      72 ..      15      73 .. 0.96
   2 ?   -0.4   1.9      0.64   1.2e+03      25      44 .]     567     588 ..     565     588 .. 0.83
   3 ?   -3.4   4.2       5.5   9.8e+03      24      43 ..     670     689 ..     669     690 .. 0.80
   4 ?   -1.5   3.6       1.4   2.6e+03      24      39 ..     695     706 ..     694     708 .. 0.81
   5 ?   -4.4   5.6        10   1.8e+04       2      20 ..     760     779 ..     759     799 .. 0.52

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 1.4e-07
   zf-RING_5  2 CnkCfeklskeekfyltsCgHifCekClkkll.................ekeavCpiCr 43
                C +C e l    +  l+ C H+fC +Clkk +                 +++++Cp+Cr
  KHJ31493.1 16 CTICTEIL--YAPQTLLDCLHTFCGSCLKKWFswqydswkntpqslpatASKFTCPACR 72
                99999999..9999********************************************9 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.64
   zf-RING_5  25 CekClkkll..ekeavCpiCrk 44 
                 C +C k     e  ++C iC+k
  KHJ31493.1 567 CARCGKDHIeyEWHYNCKICSK 588
                 9999999998888999999976 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 5.5
   zf-RING_5  24 fCekClkkllekeavCpiCr 43 
                 fC +C     e + +C iC+
  KHJ31493.1 670 FCANCHIWTNECYWRCNICN 689
                 89999888888888899986 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 1.4
   zf-RING_5  24 fCekClkkllekeavC 39 
                 fC++C+++      +C
  KHJ31493.1 695 FCNNCVNQGY----CC 706
                 8999*99987....55 PP

  == domain 5  score: -4.4 bits;  conditional E-value: 10
   zf-RING_5   2 CnkCfekl.skeekfyltsC 20 
                 C +C+ ++ +++ +++  sC
  KHJ31493.1 760 CDICRYPIqHSQTRYHCFSC 779
                 55555555433333444444 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.5   1.5e-07   0.00027       4      39 ..      10      45 ..       8      49 .. 0.93
   2 ?   -3.5   0.1       5.7     1e+04      43      57 ..      68      80 ..      66      85 .. 0.71
   3 ?   -1.8   0.1       1.7     3e+03       5      14 ..     562     571 ..     561     589 .. 0.84
   4 ?   -9.5  11.1        10   1.8e+04      22      39 ..     688     704 ..     669     718 .. 0.65
   5 ?   -2.5   2.5       2.7   4.8e+03      12      39 ..     758     784 ..     752     801 .. 0.66

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.5e-07
   zf-RING_6  4 lekllrcsrctdilrepvclggcehifcsncisdcf 39
                le+ l c+ ct+il  p  l  c h fc  c+   f
  KHJ31493.1 10 LERELTCTICTEILYAPQTLLDCLHTFCGSCLKKWF 45
                8999***************************98766 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 5.7
   zf-RING_6 43 cpvcytpawiqdvki 57
                cp c +p  ++d k 
  KHJ31493.1 68 CPACRAP--VRDTKH 80
                9999988..456555 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1.7
   zf-RING_6   5 ekllrcsrct 14 
                 e l++c+rc 
  KHJ31493.1 562 EPLIKCARCG 571
                 6789999996 PP

  == domain 4  score: -9.5 bits;  conditional E-value: 10
   zf-RING_6  22 clggcehifcsncisdcf 39 
                 c  g +  fc nc+ + +
  KHJ31493.1 688 CNDG-DWGFCNNCVNQGY 704
                 4433.4568888887643 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 2.7
   zf-RING_6  12 rctdilrepvclggcehifcsncisdcf 39 
                    di r p+         c  cis   
  KHJ31493.1 758 TRCDICRYPIQHSQT-RYHCFSCISSTS 784
                 444899999877655.457888998654 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   5.5e-06    0.0098      34      56 ..     965     987 ..     940     988 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 5.5e-06
                 CTTEEEEEECCCEEEEEGCGEEE CS
       SH3_2  34 sdgwwegevgGrvGlfPsslvee 56 
                 +++w +g+++Gr+GlfP ++v++
  KHJ31493.1 965 NGDWFHGTYMGRQGLFPANHVRI 987
                 469******************96 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   5.5   5.5e-06    0.0099       1      32 [.      16      48 ..      16      71 .. 0.68
   2 ?   -6.4   4.5        10   1.8e+04      19      24 ..     669     674 ..     668     688 .. 0.63
   3 ?   -0.8   1.3      0.99   1.8e+03      19      28 ..     694     703 ..     691     711 .. 0.75
   4 ?    2.9   6.3     0.069   1.2e+02      20      42 .]     775     797 ..     760     797 .. 0.90

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 5.5e-06
  zf-C3HC4_4  1 CPiCldYLekPvs.leCGhsfClsCisslqkep 32
                C iC++ L  P + l+C h+fC sC++++   +
  KHJ31493.1 16 CTICTEILYAPQTlLDCLHTFCGSCLKKWFSWQ 48
                9**********87369**********9875443 PP

  == domain 2  score: -6.4 bits;  conditional E-value: 10
  zf-C3HC4_4  19 sfClsC 24 
                 +fC +C
  KHJ31493.1 669 TFCANC 674
                 689999 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.99
  zf-C3HC4_4  19 sfClsCissl 28 
                  fC +C+++ 
  KHJ31493.1 694 GFCNNCVNQG 703
                 59*****974 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.069
  zf-C3HC4_4  20 fClsCisslqkepdgeqllCplC 42 
                  C+sCiss + + +g++  C  C
  KHJ31493.1 775 HCFSCISSTSVSHSGNYDVCINC 797
                 6***************999*999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1008 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2210  (0.123264); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                        35  (0.00195214); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.08u 0.32s 00:00:01.40 Elapsed: 00:00:00.51
# Mc/sec: 5980.21
//
Query:       KHJ31494.1  [L=434]
Description: putative acyltransferase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.8e-30  105.1  36.8    4.8e-30  104.8  35.9    1.5  2  Acyl_transf_3    Acyltransferase family
  ------ inclusion threshold ------
       0.42   10.6   5.4       0.46   10.5   0.2    2.8  2  PsbI             Photosystem II reaction centre I protein (PS
        2.3    8.7   6.9       0.35   11.3   0.3    2.8  3  Caps_synth_CapC  Capsule biosynthesis CapC


Domain annotation for each model (and alignments):
>> Acyl_transf_3  Acyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.8  35.9     8e-34   4.8e-30       2     333 ..       9     400 ..       8     404 .. 0.92
   2 ?   -3.2   5.5      0.56   3.4e+03     135     162 ..     382     408 ..     369     419 .. 0.75

  Alignments for each domain:
  == domain 1  score: 104.8 bits;  conditional E-value: 8e-34
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxx RF
  Acyl_transf_3   2 aylDllRgiAillVvflHaliayspdagrgspiqasqssqi.......aflggfgvplFFllSGffla..........amlyrrrglsklikrRil 80 
                    +++D+lRg+A llVvf H++ a++ d +   + +      +       ++ g++gv +F l++G+++a          +++    +  +  +rRi+
     KHJ31494.1   9 KWVDGLRGCASLLVVFTHIARAFDVDLFKPVSAEGAPPRLLqypffriFVQGRIGVAIFSLVTGYVCAlkplrqirsgDQNAAFNSIARSAFRRIP 104
                    79*******************9999999888777776666688899************************************************** PP

                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Acyl_transf_3  81 rlliplliwllliillialvaghiqanasanvtlfdet................kglmfllfefpatghlWfLwalfvlylllplllrllrkvrks 160
                    rl++p+ i ++li+++++l+a +   +++ +++   +                 ++ +++   + ++   W+L+ l+  ++++++ l +++  r++
     KHJ31494.1 105 RLILPTTIATVLIWFICQLGAFEVANHVESQWLNHSSPnitpfigpafrsliynIVSTWTRELNMYDINQWTLFPLLKASMMVYVTLVATAFCRSR 200
                    ***********************999999988877666888******************************************************* PP

                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......... RF
  Acyl_transf_3 161 hlllllilllllslvfirhelfgpatsvgllplpsvlallfflfGalladaddrdrnlsrglkislllsllllalillalfgqtdg.......... 246
                    ++ll+ ++l+l+ +++  +++                 ++ f+fG++l+d++ +    ++   + ++ ++l+ +li ++lf+ +++          
     KHJ31494.1 201 YRLLIELGLFLFGYISNDATF-----------------CMTFFFGMFLSDLSQHPPHIDWLANRKWPSYILSPFLITFGLFLASYPedkaqwsrws 279
                    *********************.................********************************************************** PP

                    ............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................ RF
  Acyl_transf_3 247 ............gglvasvliqsaslllvslgimllllllfalpsrsafkllrylgkiSygiYliHlpllmllqkllrdw................ 314
                                 ++  + +++s+ l+l++lgi +     ++l ++     l ++gk+S+++Yl+H+ ll ++  +++                  
     KHJ31494.1 280 eilgqysiyffpKENETPRYYTSVGLILICLGIHFSNFVKNILSNKY----LLWFGKNSFAVYLLHGTLLRTILVWMYFGiskppdiihedgkvep 371
                    ***********************************************....999************999999999999996677777666666666 PP

                    ..xxx.........xxxxxxxxxxxxxxxx RF
  Acyl_transf_3 315 ..gln.........lgevlllvlllvvsvi 333
                        +         +++v++++l+ ++ ++
     KHJ31494.1 372 ghL-PypgrlrwyfWMPVWFVILYWIANLW 400
                    550.14455555777888888887777665 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.56
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Acyl_transf_3 135 WfLwalfvlylllplllrllrkvrkshl 162
                    W+ w+ +++++l+++ ++l +k+  +++
     KHJ31494.1 382 WYFWMPVWFVILYWI-ANLWTKYVDPWC 408
                    999999999998655.455555555554 PP

>> PsbI  Photosystem II reaction centre I protein (PSII 4.8 kDa protein)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.2   7.7e-05      0.46      17      29 ..     208     220 ..     204     220 .. 0.88
   2 ?    1.6   0.8     0.045   2.7e+02      15      29 ..     221     235 ..     219     239 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 7.7e-05
        PsbI  17 slFvFGfLsnDPs 29 
                 +lF+FG++snD +
  KHJ31494.1 208 GLFLFGYISNDAT 220
                 8**********75 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.045
        PsbI  15 fvslFvFGfLsnDPs 29 
                 f   F+FG   +D s
  KHJ31494.1 221 FCMTFFFGMFLSDLS 235
                 7889****8888865 PP

>> Caps_synth_CapC  Capsule biosynthesis CapC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.72   4.3e+03      33      52 ..     104     123 ..      98     131 .. 0.73
   2 ?   -0.9   0.3      0.35   2.1e+03      34      50 ..     185     201 ..     154     236 .. 0.59
   3 ?   11.3   0.3   5.9e-05      0.35      51      84 ..     321     354 ..     299     363 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.72
  Caps_synth_CapC  33 plsllvtllialltylivrl 52 
                      p  +l t+++++l+++i++l
       KHJ31494.1 104 PRLILPTTIATVLIWFICQL 123
                      56677788888888888776 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.35
  Caps_synth_CapC  34 lsllvtllialltyliv 50 
                      +++ vtl++++ +   +
       KHJ31494.1 185 MMVYVTLVATAFCRSRY 201
                      22333333333333333 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 5.9e-05
  Caps_synth_CapC  51 rllsrflilyGrrrfvavlllgvlvklllellll 84 
                       l +++l+++G++ f++ ll g+l++++l +++ 
       KHJ31494.1 321 ILSNKYLLWFGKNSFAVYLLHGTLLRTILVWMYF 354
                      347899**********************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      203  (0.0113224); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3164.65
//
Query:       KHJ31495.1  [L=518]
Description: putative chl4 family chromosome segregation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.1e-112  375.2   0.0   5.8e-112  375.0   0.0    1.0  1  CENP-N    Kinetochore protein CHL4 like


Domain annotation for each model (and alignments):
>> CENP-N  Kinetochore protein CHL4 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  375.0   0.0  3.2e-116  5.8e-112       2     415 .]      25     510 ..      24     510 .. 0.87

  Alignments for each domain:
  == domain 1  score: 375.0 bits;  conditional E-value: 3.2e-116
      CENP-N   2 sttkslrkiLnrlsrssLlsLvlkWldkrnlqlaaP.eddeeddeaedkylpertleslqelytelqerkgsKrevidrilegdWrhglnlyqlAqlDi 99 
                 s+++++r+iLnrl+r +Ll+L+l+Wl++ n+ ++aP  ++  dd   d ++p+ +le+l+ +y+ l+++ g Kr+vi+rilegdWrhg +ly lA++D+
  KHJ31495.1  25 SSHPIVRRILNRLTRPALLTLALDWLSDINQLTTAPfLREPLDDISYDLFPPSSSLEQLRGVYNGLERQGGTKRDVIERILEGDWRHGVSLYALAMADM 123
                 799*********************************855677788899*************************************************** PP

      CENP-N 100 qylvdhpnslkWtasklkksdg........seviprldpstFlsnLqeelsplvkahyylfrhetlpliilRiqlfdspystpsq...apetaldsskp 187
                 q+l+ hp+s+ W a ++++++         ++++p+++ps Fl+n+q e  p++k h++++rh++lpl+ilR++++++py+++ +   ++ + l+ s++
  KHJ31495.1 124 QFLYSHPSSQNWLAWEISPLSLsssamlkiERAVPSFHPSVFLRNMQLECLPDIKVHFNIDRHDKLPLLILRVWILETPYNSSFSlvhTAGNFLNNSRV 222
                 *******************99999**********************************************************999998999******** PP

      CENP-N 188 vYvafpdnspyifiSka..........hstatdakslqklvlqaipkalsrprkriaLketslptrsLeallalrGpsrynaagGawsiyadasveks. 275
                 +Y+afpd spy+fiS++           s+a++++sl+k++++aipka s+p +r+ L++t+l+++sLea+ + rG++r naa  aw+ ya+   e+s 
  KHJ31495.1 223 FYIAFPDFSPYVFISSSktfsktpyspVSKAGESRSLRKIIMDAIPKAYSKPGERYRLRNTKLSAKSLEAIIEHRGNGRMNAASAAWATYAET--EGSe 319
                 *******************************************************************************************42..2222 PP

      CENP-N 276 .....Pldprkkhpilsekeedegdkeekksargrke.kerlteeskstkerkkr........rklvaqerfgek...dslaplerveyrLedef.... 353
                      Pld+  k+ +++ +   +++  + ++ +++++ k ++t+   +++    +        +k+va+ rfg++   d+++++er+ +r+ed+f    
  KHJ31495.1 320 alkdnPLDTSFKTYPYEYDDDYDDHGGDISFNKTKSTlKVKTTNGRPRSN----KiesettllNKKVAKVRFGRSalpDDGKGIERLYVRIEDPFpnps 414
                 23444888777766654444422223333333333323333333333322....223346788899********************************* PP

      CENP-N 354 ..................................eeedgdeeeedreepkiklklsGsdvfaGLreLaeagivDaekmPgwltGeegvssgkvrdg 415
                                                    +++++ + +++++p+i++ ++Gs++faG+reL+e +i+D+ +mPgw+tGeeg + g +r+g
  KHJ31495.1 415 tslaglnsrhqfnnqktvrdindrsaniskfqknPNKVKERTGNETWRPEISVIFAGSHIFAGIRELVECNIIDGLRMPGWMTGEEGINEGIIRNG 510
                 *****99999999877777777777776666654444444444458************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       502  (0.0279993); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 3956.96
//
Query:       KHJ31496.1  [L=322]
Description: putative cortical actin cytoskeleton protein vip1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-07   31.6   0.0    1.8e-07   30.8   0.0    1.4  1  DAGK_cat  Diacylglycerol kinase catalytic domain


Domain annotation for each model (and alignments):
>> DAGK_cat  Diacylglycerol kinase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0     1e-11   1.8e-07       2      99 ..      59     149 ..      58     165 .. 0.92

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 1e-11
                 EEEEE-TTCTTTTHHHHH.HHCHHHHHHCTCEEEEEE--STTHHHHHHHHHHHCC-SEEEEEESHHHHHHHHHHHCTHHCTTSEEEEEE-SS--HHHHH CS
    DAGK_cat   2 llvivNpksGkgkgekll.rkvrelleeagvelelieteepgdakelakeakeegvdlivvaGGDGtvsevlnglleelatkpplgiiPlGtgNdlara 99 
                 ++vi+  +sG g +++++ + + +ll+  gv +++++t+  ++ k++a +++     +++ ++GDG vs ++n        ++ + ++P+G+gN++  +
  KHJ31496.1  59 VHVIISVTSGIGLAAQYYtEVILPLLNALGVACKAFYTTDCDSLKKIAPTLSG----TVILLSGDGGVSDIINYTKS----HLTIVLFPMGSGNAIYNS 149
                 79****************99999****************99999999999988....7***************9888....*************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2569.31
//
Query:       KHJ31497.1  [L=147]
Description: hypothetical protein EV44_g3183 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        4.2    8.0   6.6       0.96   10.1   0.7    2.3  2  VP4_2     Viral protein VP4 subunit


Domain annotation for each model (and alignments):
>> VP4_2  Viral protein VP4 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.7     0.051   9.2e+02      45      75 ..      56      84 ..      48      89 .. 0.74
   2 ?   10.1   0.7   5.3e-05      0.96       6      29 ..     117     140 ..     112     144 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.051
       VP4_2 45 sgeseasedaasthtsllknndwfsklania 75
                s ++++    as  ts ++  d   k++n +
  KHJ31497.1 56 SSKNNGIPRNASPSTSCTR--DTAPKFSNAS 84
                6678888889999999998..6666666655 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 5.3e-05
       VP4_2   6 spetGsqnqsGntGsiinnyysqs 29 
                 s  +G++   Gn  +i+nny+ q+
  KHJ31497.1 117 SRRNGKTYVYGNKEVINNNYWKQK 140
                 6789*****************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       700  (0.0390429); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 1139.38
//
Query:       KHJ31498.1  [L=722]
Description: putative white collar protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.4e-12   45.3   0.0    5.4e-11   42.7   0.0    2.3  2  PAS_9     PAS domain


Domain annotation for each model (and alignments):
>> PAS_9  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.7   0.0     3e-15   5.4e-11       8     103 ..     347     442 ..     338     443 .. 0.95
   2 ?   -1.2   0.0      0.14   2.4e+03      71     101 ..     623     651 ..     594     652 .. 0.79

  Alignments for each domain:
  == domain 1  score: 42.7 bits;  conditional E-value: 3e-15
       PAS_9   8 npdgrilyaNeaalrllGyspeevlgksitdlf..vtdpeanerlraaleqgrkkerevevvlirkngetfwvlltaspvkdddgelvgiivilrDit 103
                  pd++i++ +e + r ++y+   v+g++++ l+  +t+p + +r+r+ +++g   e+ + + ++r++g++f++l+ ++p+ d++g+++ +i+ ++D++
  KHJ31498.1 347 RPDNPIIFSSEEFHRTTQYGIPYVIGRNCRFLQgpKTNPFSIKRFREKINAGM--EHCEVILNYRRDGSPFMNLFMCAPLCDSKGKIRYFIGAQVDVS 442
                 5899*************************************************..*****************************************98 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.14
       PAS_9  71 kngetfwvlltaspvkdddgelvgiivilrD 101
                 ++g+  w  ++++p+  ++g +  + v+++D
  KHJ31498.1 623 PEGRNRW--IHCTPLLGSNGAIGVWMVVIVD 651
                 5667778..999***9989988887677666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (722 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 5068.74
//
Query:       KHJ31499.1  [L=1483]
Description: putative inositol pyrophosphate synthase vip1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.1e-107  360.8   2.7   1.9e-107  360.0   2.7    1.4  1  His_Phos_2  Histidine phosphatase superfamily (branch 2)
    3.1e-36  123.4   0.0    8.4e-36  122.0   0.0    1.8  1  PPIP5K2_N   Diphosphoinositol pentakisphosphate kinase 2 N-te
    2.5e-05   23.9   0.0    5.1e-05   23.0   0.0    1.4  1  RimK        RimK-like ATP-grasp domain


Domain annotation for each model (and alignments):
>> His_Phos_2  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  360.0   2.7  3.1e-111  1.9e-107       1     374 [.     702    1311 ..     702    1337 .. 0.97

  Alignments for each domain:
  == domain 1  score: 360.0 bits;  conditional E-value: 3.1e-111
                  EEEEEEEEEE--SBB-SHHHHHHHHHHHHHHHH......................................HHCHHTGCCGGGGT............ CS
  His_Phos_2    1 eLksvvvviRHGdRtPkqkvkksvtspiflsllkkhke.............................Klkqlktalekkghfpgtyrkv........ 60  
                  +Lk++v+viRH+dRtPkqk k ++    f++llk+h+e                             Kl++lk+ l kkg + gt+ ++        
  KHJ31499.1  702 KLKGMVSVIRHADRTPKQKLKFTFHTKPFIELLKGHQEevlltgqaalesvtvavdtallegvedpeKLRNLKNILVKKGGWIGTKVQIkpmfrrkt 798 
                  69*********************************************************************************************** PP

                  ...................................................................--SSSTTS.B-HHHHHHHHHHHHHHHHHCH CS
  His_Phos_2   61 ..............................................................eveklqlilkwggelthaGrkqaeelGrqfrqrYp 95  
                                                                                + +klqli+kwgge+th++r+q +elG+ +r++  
  KHJ31499.1  799 adveknnsaiskeelpklkaadkevekeqndkfdepehnllerydslseitlsritaaenslVLDKLQLIVKWGGEPTHSARYQSQELGESMRNDLI 895 
                  ************************************************************************************************9 PP

                  TCCHTTSS--TTEEEEEESSHHHHHHHHHHHHHHCHCCC---S-TTSTTGGG-TTTTCCCEEEHHHHCCCCHHCTTSHHTCHHHC......HHHTGG CS
  His_Phos_2   96 lgLlrlhltykdlkirassegRviaSAaafakGllglegeltdllskdkdllddsnaakdlldeakkklkelltegaeacpafew......pikvak 186 
                   +++r+ l  +++ +++sse+Rv +SA+++a ++  +++++td+++++kdllddsnaakd++d++kkklk ll++g  a+p+f+w      p  v k
  KHJ31499.1  896 -LMNREVL--DNVHVFSSSERRVTTSAQIWAAAFTHQKEISTDFIQIRKDLLDDSNAAKDEMDKVKKKLKTLLRRGISAPPQFAWpsnmpePSIVQK 989 
                  .*****99..*************************************************************************************** PP

                  HCHHHHCHCCCCCHHHHHHHCHHH...........................................CTTEEEE-HHHHHHHHHHHHHHHHHHCT-T CS
  His_Phos_2  187 rvdelvkylkedmdeniakrleql...........................................cpgesnllakerwdklercfyeknkfdisk 240 
                   v++l+k ++++m++n++k ++ +                                           c+ge+ +l+kerw+kl+++f++ +k d+sk
  KHJ31499.1  990 CVVKLMKFHCKVMRYNYSKIYSGTslslgtiknpgekdgfkektttgsqnynstlqngatsgiqarwCCGEDAILFKERWEKLFSEFCDGEKVDPSK 1086
                  ******************8888888888888888999999999999*************************************************** PP

                  TGGGCTH..HCHHHHHH................................................................................ CS
  His_Phos_2  241 icdlydemkydalhnry................................................................................ 257 
                  i++lyd+mk dalhnr+                                                                                
  KHJ31499.1 1087 ISELYDTMKFDALHNRQflewvftpsksilaeeedeileelkeigkakqqprsheeavddqelslsksefsrslhrrmfhrssmifgsknfeeppeq 1183
                  ************************************************************************************************* PP

                  ..................HHHHHHHHHC.............TTTCCCCHHHHHHHHHHHHHHHCTSSSEECCSCCCECS-SEEEEEE-HHHHHHHHH CS
  His_Phos_2  258 ..................lkdleelyklakv.....ipqEygigpeeklkiGllllnpllkkilndlqrtreeatperhvrlrlyfthdshiyslln 331 
                                    l++l+elyklakv     +pqEyg ++ ekl+iGll+++pllk+i +dl +++     ++ ++ ++yft++shiy+lln
  KHJ31499.1 1184 yfrlftgnsntkaktdarLEKLRELYKLAKVlfdfiCPQEYGMTDAEKLEIGLLTSLPLLKEIVQDLEKMQ----ASDEAKSLIYFTKESHIYTLLN 1276
                  ***********************************************************************....9********************* PP

                  HC...TTTTTBTTB.SSS.TTT..HCCCS-CT-EEEEEEEEETCTT CS
  His_Phos_2  332 aL...glpeelagedslaaldrlsaspelpymsqivfelyedssek 374 
                  ++   g+ +++++           a+pel+y+sqi+felye  ++k
  KHJ31499.1 1277 CIlegGITTKITRS----------AIPELDYLSQICFELYES-ENK 1311
                  **************..........*****************4.222 PP

>> PPIP5K2_N  Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.0   0.0   1.4e-39   8.4e-36       2      90 .]     217     305 ..     216     305 .. 0.99

  Alignments for each domain:
  == domain 1  score: 122.0 bits;  conditional E-value: 1.4e-39
   PPIP5K2_N   2 kvgvcamekkakskpmkeilerlekfeelevvifeeevileepveeWPlcdvlisfyskgfPlekaieYaklrkpflindleaqelllD 90 
                 ++gvca++ ka+skp ++il+rl + +e++vv+f+++vil+e++e+WP cd+lisfys+gfPl+kai+Y+k rkpf++n+l +q++l+D
  KHJ31499.1 217 VIGVCALDVKARSKPSRNILNRLISKGEFKVVVFGDKVILDEDIENWPACDFLISFYSDGFPLDKAIAYVKARKPFCVNHLPMQKILWD 305
                 59**************************************************************************************9 PP

>> RimK  RimK-like ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   8.5e-09   5.1e-05      76     165 ..     443     534 ..     429     546 .. 0.90

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 8.5e-09
                 -EEEEE--SS-SEEEEEEEETTEEEEEEEEE-..-SSS----TTTT-EEEE----HHHHHHHHHHHHHCT-SEEEEEEEEETTEEEEEEEES CS
        RimK  76 ilvqeyieeaenediRvlvvddevvaalrrvs..keGdFRsnlhrGgvaeklqlseeekelAikaakamelvvaGvDllrakrgllvlEvns 165
                  +  ++++  + ed++   v+ +   a  r+s   +G  R n h   +  + +l++ee  +A ++a   +  v+G Dllr++   +v++vn 
  KHJ31499.1 443 YIYEKFMKVDNAEDVKAYTVGPNFCHAETRKSpvVDGLVRRNNHGKEIRYVTSLTKEESAMASRIAISFGQRVCGFDLLRTDGKSFVIDVNG 534
                 577899******************99999987446999****99999999*****************************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1483 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1121  (0.0625244); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.91u 0.27s 00:00:01.18 Elapsed: 00:00:00.47
# Mc/sec: 9507.48
//
Query:       KHJ31500.1  [L=430]
Description: hypothetical protein EV44_g2048 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.6e-05   22.9   5.3     0.0001   22.5   5.3    1.3  1  TFIIA           Transcription factor IIA, alpha/beta subunit
  ------ inclusion threshold ------
       0.49    8.4  20.8       0.77    7.8  20.8    1.2  1  DNA_pol_phi     DNA polymerase phi
        1.5    9.4   3.9        2.7    8.6   1.9    2.2  2  NADH_dehy_S2_C  NADH dehydrogenase subunit 2 C-terminus
        3.6    5.6   9.4        5.3    5.0   9.4    1.2  1  Sporozoite_P67  Sporozoite P67 surface antigen
        5.1    6.1  17.4        9.9    5.2  17.4    1.4  1  Astro_capsid_p  Turkey astrovirus capsid protein
        8.2    5.6  17.9         16    4.7  17.9    1.4  1  NOA36           NOA36 protein
        9.3    7.5  12.1       0.85   10.8   5.5    2.6  2  SOGA            Protein SOGA


Domain annotation for each model (and alignments):
>> TFIIA  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   5.3   3.9e-08    0.0001     174     350 ..     156     381 ..      14     386 .. 0.54

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 3.9e-08
       TFIIA 174 svaalqaqsqqaqalaepqqqlekqqqqqqqqqqqqqqqqvqqqqqe..........................................esqqaqqa.. 228
                 +++ +q+q  q q la+                       +     +                                          e qqa+ +  
  KHJ31500.1 156 KLKRMQSQ--QRQHLAR----------------------DM-----KsdeyskhsldmkksfledgdfpsarrglrsyyieeddyyynrE-QQAPPPay 224
                 11222211..1111111......................11.....01111122334444444455555555555566665555555421.22222223 PP

       TFIIA 229 sqe.qvagsqvessqtdgaedaleeespvlegelsaeeeagaqkeelsreeidrire...............................ealkakeleke 295
                 s++ + + +qv+ + +++a++  ++ s  +   +s+++++ +++   s + i+++                                 +          
  KHJ31500.1 225 SKKyVYQRGQVQFAYDSQASHGRQT-SYTHPSTVSNRRRHYSSSGLGSGSAIENL-GllrssaaarrssahgnsrpaiyrptvcqanrS---------- 311
                 2222333344444444444322222.22233444444444443333333334433.022223222222222222222333333333330.......... PP

       TFIIA 296 skkkkraeessla...........................dlseilqlDGagddsdeeeeeeesdedsdsessddedeqveE 350
                             +                           ++ ei   D  +d++d+e+++++ d+dsds+s++ded++ve 
  KHJ31500.1 312 ------------SyskkhlipryqmeeicenesalesdleSEDEISDQDKSNDEEDDEDSDSDRDSDSDSDSDNDEDSDVEN 381
                 ............0333333333322222333333334444677778888888888887777777777777777777777544 PP

>> DNA_pol_phi  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8  20.8    0.0003      0.77     634     687 ..     331     383 ..     319     414 .. 0.54

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0003
  DNA_pol_phi 634 qaelfedededeeddeeeeeeddeededseedddeeesdedeededdedvdeid 687
                  +++l e + e+e++ +++++++deed++++++d +++sd+d+++++d+dv++++
   KHJ31500.1 331 ESAL-ESDLESEDEISDQDKSNDEEDDEDSDSDRDSDSDSDSDNDEDSDVENEK 383
                  3333.3344444444444444444444444444445555555556666666544 PP

>> NADH_dehy_S2_C  NADH dehydrogenase subunit 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   1.9    0.0011       2.7      21      54 ..      19      51 ..      15      52 .. 0.87
   2 ?   -0.1   0.0      0.56   1.4e+03      34      53 ..      92     111 ..      80     112 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0011
                    -SS---SS------SS-HHHHHHHHS-TT--STH CS
  NADH_dehy_S2_C 21 nskmkwrlsstkptlllatltvlSillLpltpli 54
                       ++w++ +  +++  atlt++S+++ plt+ i
      KHJ31500.1 19 ELQLEWQNYTR-QLTSGATLTTTSVMMSPLTSGI 51
                    56789999999.999****************976 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.56
                     -SS-HHHHHHHHS-TT--ST CS
  NADH_dehy_S2_C  34 tlllatltvlSillLpltpl 53 
                     +++ a+++++S l+L  tpl
      KHJ31500.1  92 IIPAAITITTSGLTLGATPL 111
                     56788999999999988885 PP

>> Sporozoite_P67  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   9.4    0.0021       5.3      93     145 ..     332     385 ..     296     404 .. 0.64

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0021
  Sporozoite_P67  93 vsqeselqsdteineddkGskedseedddeeeeednkstsskdgkgs.kkaqpg 145
                        es+l+s+ ei ++dk ++e+++ed d + + d +s s  d+    +  +p 
      KHJ31500.1 332 SALESDLESEDEISDQDKSNDEEDDEDSDSDRDSDSDSDSDNDEDSDvENEKPR 385
                     345667777777777777777766666666666666666655554320222333 PP

>> Astro_capsid_p  Turkey astrovirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  17.4    0.0039       9.9     230     285 ..     323     382 ..     294     385 .. 0.58

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0039
                     ...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXX..XXXX...XXXXXXX CS
  Astro_capsid_p 230 aeeeisdpsdeedeevsdeetdtevesdeDeddevd.rfDletsyeSeae...Dddvenn 285
                     + eei++++++ +++ ++e++ ++ ++ +De+d++d + D ++ ++S+++   D+dven+
      KHJ31500.1 323 QMEEICENESALESDLESEDEISDQDKSNDEEDDEDsDSDRDSDSDSDSDndeDSDVENE 382
                     567888888888866655555445444444444443256666666665541114458876 PP

>> NOA36  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7  17.9    0.0061        16     237     296 ..     321     380 ..     303     390 .. 0.41

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0061
       NOA36 237 rqkqadgsddddddeedsdydaylkalasgddeddegdedddddddeedddeeeddedee 296
                 r ++++  +++   e+d + ++  +    ++de+d++d+d d d+d ++d+++++d+d e
  KHJ31500.1 321 RYQMEEICENESALESDLESEDEISDQDKSNDEEDDEDSDSDRDSDSDSDSDNDEDSDVE 380
                 444444444444333333333333332222222222222222222222222222222222 PP

>> SOGA  Protein SOGA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.5       2.1   5.4e+03      34      50 ..     154     170 ..     142     188 .. 0.53
   2 ?   10.8   5.5   0.00033      0.85      55      95 .]     366     417 ..     318     417 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 2.1
        SOGA  34 teeLnkyksklgeeess 50 
                 +++L++++s+ +++ + 
  KHJ31500.1 154 KRKLKRMQSQQRQHLAR 170
                 34444444444444333 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00033
        SOGA  55 e...........eassdsskeaelkeeLklarlqineLsgkvvkLqvenrvL 95 
                 +             ++++ ++ ++ e++ + +++in+L+  +++L++e+r+L
  KHJ31500.1 366 DsdsdsdndedsDVENEKPRTGKTTEHVLTLEQEINILKATILRLEMEKRGL 417
                 033333444444666777789999**************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1430  (0.079759); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.47
# Mc/sec: 2747.91
//
Query:       KHJ31501.1  [L=450]
Description: putative carbamoyl-phosphate synthase arginine-specific small chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.3e-46  154.8   0.0    2.5e-45  153.4   0.0    1.7  2  CPSase_sm_chain  Carbamoyl-phosphate synthase small chain, CP
    3.1e-45  154.3   0.0    4.5e-45  153.8   0.0    1.2  1  GATase           Glutamine amidotransferase class-I
    4.3e-06   26.6   0.3    0.00076   19.3   0.3    2.4  1  Peptidase_C26    Peptidase C26
  ------ inclusion threshold ------
       0.11   12.2   0.0        0.2   11.4   0.0    1.4  1  DJ-1_PfpI        DJ-1/PfpI family


Domain annotation for each model (and alignments):
>> CPSase_sm_chain  Carbamoyl-phosphate synthase small chain, CPSase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.4   0.0   5.6e-49   2.5e-45       2     128 .]      49     185 ..      48     185 .. 0.90
   2 ?   -2.1   0.0      0.73   3.3e+03      70     106 ..     263     300 ..     255     302 .. 0.75

  Alignments for each domain:
  == domain 1  score: 153.4 bits;  conditional E-value: 5.6e-49
  CPSase_sm_chain   2 avLvLedGtvfeGksfg.akeavGEvvfnTgmtGYqeiltDpsYagqilvltypliGnyGv.....needves.........ekikvaglvvre 80 
                      a+++++dG +f+Gksfg +++ +GE vf+T+++GY+e++tDpsY+gqilv+t+pliGnyGv     +     s          +i++ g+vv++
       KHJ31501.1  49 ATFTIKDGPIFHGKSFGaKTNISGEAVFTTSLVGYPESMTDPSYRGQILVFTQPLIGNYGVpssirD-----SnsllkyfesPNIQCMGIVVAD 137
                      56789************66888***************************************655440.....344555665599********** PP

  CPSase_sm_chain  81 lseepsnwraeesLsewlkeekipgisgvDTRaLtkklrekgamkgvi 128
                      ++ ++s+w+a esLsew+ +e+ip+is+vDTRa++++lre g+ +++i
       KHJ31501.1 138 YAVKYSHWTAVESLSEWCIREGIPAISNVDTRAIVTHLREVGSSLARI 185
                      *******************************************99876 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.73
  CPSase_sm_chain  70 kikvaglvvrelseepsnwra.eesLsewlkeekipgi 106
                        +  g+ +++   +p + ++   +Ls++++++++p +
       KHJ31501.1 263 AHHFDGVFISNGPGDPTHCQQtVYHLSRLMETSQVPIM 300
                      56778888888888888877515689999999998865 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.8   0.0     1e-48   4.5e-45       2     189 ..     230     406 ..     229     407 .. 0.96

  Alignments for each domain:
  == domain 1  score: 153.8 bits;  conditional E-value: 1e-48
                 EEESSTSTHHHHHHHHHHTT-EEEEEETTSHHHHHHHTHHSTSEEEEEEESSCTT.TTTHHHHHHHHCT.STS-EEEETHHHHHHHHHTTTEEEEEECE CS
      GATase   2 liDnydsvtenlvhalvelgvkvevvpidasaeeilellknpdgilvsgGpgspg.vegkieaikeare.nkiPiLGICLGmQllaiefgrkvvkekek 98 
                 +iD++  v+en++++l+ +g++v+v+p+d +++++     ++dg+++s+Gpg+p+ +++++  +++++e +++Pi+GICLG+Qlla++ g+ + k+k +
  KHJ31501.1 230 VIDCG--VKENILRSLICRGASVTVLPYDFPIHKSA---HHFDGVFISNGPGDPThCQQTVYHLSRLMEtSQVPIMGICLGHQLLALAAGARTLKMK-Y 322
                 89***..************************99995...69*******************99999999999**************************.* PP

                 EEEEEEEEEEETTTCGGTTTTSEEEEEEEEEEEEESGCHHHTTEEEEEEEETTEEEEEEEEETTTEEEESSBTTSTTSTTHHHHHHHHHHH CS
      GATase  99 ehhggtmrlgddetallyglknevierhrHryevnpkelepaglevtakseddeelmeiiekknpfvgvQFHPEststpegpellfnflik 189
                 +++ ++++  d        ++++ i++++H+y+v+  ++++++++  +++ +d+++++ii++++p++++QFHPE++ +p+++++lf+ +i+
  KHJ31501.1 323 GNRAHNIPALD------LTKNQCQITSQNHGYAVDF-SSLSSDWKEFFVNLNDGSNEGIIHRTRPIFSIQFHPEAKGGPMDSAYLFDMYIE 406
                 ***********......55559*************9.99***********************************************98875 PP

>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.3   1.7e-07   0.00076      96     129 ..     287     320 ..     279     389 .. 0.61

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 1.7e-07
  Peptidase_C26  96 aLiraalergvPilgiCrGlqllnvalGGtlyqd 129
                     L r + +++vPi+giC+G+qll+ a G ++ + 
     KHJ31501.1 287 HLSRLMETSQVPIMGICLGHQLLALAAGARTLKM 320
                    5667777899**************9999765443 PP

>> DJ-1_PfpI  DJ-1/PfpI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.5e-05       0.2      51     113 ..     256     315 ..     206     327 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.5e-05
                 SEEGGGCTCCG-SEEEE--BHHHHHHHHTSHHHHHHHHHHHHTT-EEEEETTTHHHHHHTTTT CS
   DJ-1_PfpI  51 daslddvkaaeyDalvlpGGragperlrenekvvelvkefaekgklvaaICagpqlLaaagvl 113
                 d  + + +a  +D + +  G   p++ ++   v +l + + +++ ++  IC g qlLa a   
  KHJ31501.1 256 DFPIHK-SAHHFDGVFISNGPGDPTHCQQ--TVYHLSRLMETSQVPIMGICLGHQLLALAAGA 315
                 556665.5567*********998998887..6*************************977655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3308.38
//
Query:       KHJ31502.1  [L=611]
Description: putative sprt family metallopeptidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-35  121.6   0.6    1.3e-35  121.6   0.6    2.0  2  SprT-like       SprT-like family
    1.2e-08   34.6   2.3    2.5e-08   33.7   2.3    1.6  1  Zn_ribbon_SprT  SprT-like zinc ribbon domain
     0.0078   16.6   0.1      0.025   15.0   0.1    1.9  1  HMG_box         HMG (high mobility group) box
  ------ inclusion threshold ------
      0.066   13.3   0.4       0.16   12.1   0.4    1.6  1  Zn-ribbon_8     Zinc ribbon domain
      0.081   13.1   0.2       0.33   11.1   0.2    2.1  1  DUF678          Protein of unknown function (DUF678)
       0.12   12.4   0.3       0.27   11.3   0.3    1.5  1  HypA            Hydrogenase/urease nickel incorporation, meta
       0.31   11.3   1.8        1.7    9.0   1.8    2.3  1  zf-C2H2_8       C2H2-type zinc ribbon


Domain annotation for each model (and alignments):
>> SprT-like  SprT-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       2.7   6.8e+03      14      31 ..     204     221 ..     193     261 .. 0.50
   2 !  121.6   0.6   5.2e-39   1.3e-35       1     113 []     348     481 ..     348     481 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.7
   SprT-like  14 ggqaaggvkiiwskrlnt 31 
                 ++q+ +g +i+ +k   +
  KHJ31502.1 204 RNQSIQGQQISKRKISLK 221
                 444333333333322211 PP

  == domain 2  score: 121.6 bits;  conditional E-value: 5.2e-39
   SprT-like   1 aeelfkklddavfggq......aaggvkiiwskrlnttaGranlkr................atvrhhasIeLseklldsrsedrllntLaHElcHlal 77 
                 ae+++ +ldd+++gg+      ++ggvki+w+k+ln+taGran+k                  +  hha IeL+ek++d+  e+rlln++aHE+cHla+
  KHJ31502.1 348 AESFLLELDDKITGGEisrlaaSSGGVKITWNKKLNSTAGRANWKCekvrsknllsddepplLEIIHHAAIELAEKVIDD--EERLLNVMAHEFCHLAT 444
                 68999***************************************************************************..***************** PP

   SprT-like  78 fvisgvrnnpHGaeFkawaakvekala.arleittkh 113
                 f+is++++npHG+eFk+wa+k++k++a +++++ttkh
  KHJ31502.1 445 FMISNIKTNPHGREFKSWATKCSKHFAdRGVHVTTKH 481
                 ***************************99*******9 PP

>> Zn_ribbon_SprT  SprT-like zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   2.3   9.9e-12   2.5e-08       1      37 [.     487     524 ..     487     525 .. 0.97

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 9.9e-12
  Zn_ribbon_SprT   1 kkyvYrCtgCgreythhlsi.rrhnYrCrrCkgtLrgk 37 
                     +kyv++C +Cg e+++h+++ ++ ++rC+ C+++L+++
      KHJ31502.1 487 YKYVWKCENCGVEVKRHSKSvDPIRHRCGTCMSKLVQI 524
                     8**********************************996 PP

>> HMG_box  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   9.8e-06     0.025       5      44 ..     534     573 ..     533     580 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 9.8e-06
                 --HHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHHHHSHH CS
     HMG_box   5 lsafflfskeqraklkaenPelknaeiskklgekWkalse 44 
                 +s +  f++e+ +++++  P+   +ei++++g+k+++ ++
  KHJ31502.1 534 TSEYQTFVRENMKTIRENYPGSPQKEIMSIIGKKYQEIKA 573
                 68899*******************************9865 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.4   6.2e-05      0.16       4      37 ..     489     522 ..     487     524 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 6.2e-05
  Zn-ribbon_8   4 YeYrCeeCghefevlqsisdaplta.CPeCgsevr 37 
                  Y  +Ce+Cg e  +    s +p  + C +C s++ 
   KHJ31502.1 489 YVWKCENCGVEVKRHS-KSVDPIRHrCGTCMSKLV 522
                  6667*****6666555.454555666****99665 PP

>> DUF678  Protein of unknown function (DUF678)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   0.00013      0.33      27      52 ..     513     540 ..     491     550 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00013
      DUF678  27 TCSlCqSkLvkvsdvskv..slsklkva 52 
                  C  C SkLv+++ v ++  ++s++++ 
  KHJ31502.1 513 RCGTCMSKLVQIKPVPRSnfKTSEYQTF 540
                 59*************7661155566655 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.3    0.0001      0.27      68      99 ..     488     524 ..     473     529 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.0001
                 --EEEETTTS-EEECHH...H..HHS-TTTSSS-EEE CS
        HypA  68 pvkvrCreCgkefelee...k..alrCpkCgsadvei 99 
                 + + +C++Cg e++ ++   +  + rC++C s+ v+i
  KHJ31502.1 488 KYVWKCENCGVEVKRHSksvDpiRHRCGTCMSKLVQI 524
                 56789********966533324455*******98887 PP

>> zf-C2H2_8  C2H2-type zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   1.8   0.00066       1.7      30      81 ..     453     505 ..     433     519 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00066
   zf-C2H2_8  30 slegklfrcstascaetfpsmqelvahtklhykpn.ry.fkcencllrfrthrs 81 
                   +g+ f+  ++ c++ f      v  tk  y  + +y +kcenc +  + h  
  KHJ31502.1 453 NPHGREFKSWATKCSKHFADRGVHV-TTKHNYDIDyKYvWKCENCGVEVKRHSK 505
                 45799*************9866554.56666654324537*****999988853 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (611 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1199  (0.0668749); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.39
# Mc/sec: 4652.00
//
Query:       KHJ31503.1  [L=265]
Description: putative rna recognition domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.039   13.9   0.0      0.098   12.7   0.0    1.7  1  Nup35_RRM_2   Nup53/35/40-type RNA recognition motif
      0.065   13.1   0.1       0.12   12.3   0.1    1.4  1  RRM_occluded  Occluded RNA-recognition motif
       0.12   12.2   0.0       0.24   11.2   0.0    1.5  1  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP


Domain annotation for each model (and alignments):
>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.6e-05     0.098      25      53 .]      24      54 ..      22      54 .. 0.95

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.6e-05
  Nup35_RRM_2 25 GeIvkhyvp..kevsvmyvkfesekdaekAL 53
                 G+I+++ v+   +v  ++v+fe+e +a++AL
   KHJ31503.1 24 GKITEIKVEsnEKVQNATVTFEKETAAKTAL 54
                 99*******9988999**************8 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   1.9e-05      0.12      26      72 ..      23      70 ..      13      73 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.9e-05
  RRM_occluded 26 egeikkivLvpdh..eGAivefkdekiagkasLaLdgsefegkklrcGt 72
                  +g+i++i ++++   + A v f++e +a+k +L Ld++++ ++++++++
    KHJ31503.1 23 SGKITEIKVESNEkvQNATVTFEKE-TAAKTALLLDNTQLGENQVQVSS 70
                  47788888877652278*****875.799***********999999987 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   4.1e-05      0.24      23      69 ..      24      66 ..      22      67 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4.1e-05
                SCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1 23 GpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69
                G+i++ik+ ++    +   a V+Fe++ +A+ Al  l++++lg +++
  KHJ31503.1 24 GKITEIKVESN---EKVQNATVTFEKETAAKTALL-LDNTQLGENQV 66
                88999999997...88889****************.*****999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1116  (0.0622455); expected 358.6 (0.02)
Passed bias filter:                      560  (0.0312343); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 2169.93
//
Query:       KHJ31504.1  [L=391]
Description: putative leucine carboxyl methyltransferase 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-22   79.9   0.0    3.7e-22   79.2   0.0    1.4  1  LCM       Leucine carboxyl methyltransferase


Domain annotation for each model (and alignments):
>> LCM  Leucine carboxyl methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.2   0.0     2e-26   3.7e-22       3     187 ..      43     266 ..      41     267 .. 0.89

  Alignments for each domain:
  == domain 1  score: 79.2 bits;  conditional E-value: 2e-26
                 HHHHHHHHHHHHH..HHTSSHTCCCCCCCHHHHHHHHCHCCCHCHHCHGCHCCCCT--HHHHHHHHHHHHHHHHHHHHHH.HCTT.....ESEEEEET- CS
         LCM   3 gvaaaralesrra..adglidDplaeslvsaaglellerkadkelekekeeekkekkapelnrgiavRtrffddllkaal.saag.....irqvViLGA 93 
                 + + a+a+ sr +  + g+++D++a+ +v+   ++ l  ++ ++   +            + +g++vRt + d+l++++l s++      ++q++ LG+
  KHJ31504.1  43 QGTDADAAVSRLSavSMGYLNDKYASLFVKGPLVRRLPIINRGQSCIFA-------VLADIIAGTYVRTIALDTLIDSFLiSNDYpkdrtLKQIISLGS 134
                 6678888888885599****************99988888888777764.......6899********************7755488888********* PP

                 TT--HHHHHHHTT...TEEEEEEE-HHHHHHHHHHHHHSHHHHH................................EECSE..EE--TTS.HHHHHHHH CS
         LCM  94 GlDtrayRlpwla...glkvfEvDqpevlefKretlkelgaepk................................aelry..vpvDlrd.ddwpeaLa 154
                 G Dtr +R  + +   + ++ E D+pev   Kr+t+  ++++ +                                +e+ y   p+Dlr+ ++ ++ L 
  KHJ31504.1 135 GTDTRYFRFRDSKkykRFVYHEFDFPEVSFAKRRTILSQPELHRnsdseylwsaaepldkdselkewgfirreeniEEVAYcfHPIDLRQiTKKENLLS 233
                 ************9999999*****************999998889****************************9996777666*******555555556 PP

                 HHTT-TTSEEEEEEESSGGGS-HHHHHHHHHHH CS
         LCM 155 aagfdpekptawvaeGvlvYLtpeasdalleai 187
                   g++++ pt++++e++l+Y++  +s+a+++++
  KHJ31504.1 234 FFGLRADLPTLILSECCLCYMDVIESSAIIKWF 266
                 66****************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2911.15
//
Query:       KHJ31505.1  [L=402]
Description: hypothetical protein EV44_g5823 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    0.00011   21.6   0.0    0.00063   19.1   0.0    2.2  1  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
     0.0095   15.2   0.0        1.7    7.9   0.0    2.8  2  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
       0.01   15.8   0.0      0.087   12.8   0.0    2.3  2  NAD_binding_9  FAD-NAD(P)-binding


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0     1e-07   0.00063       3     166 ..      22     236 ..      20     372 .. 0.57

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1e-07
                  EEEE--SHHHHHHHHHHHH.HTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHH.......................................... CS
                  xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......................................... RF
  Pyr_redox_2   3 vvviGgGpAGlaaaltlaq.agakvtlvelegtclnggcllskallgvaedaeias.......................................... 57 
                   vv+G+GpAG+a+  +l + ++  ++ v  ++++  g   l k +++v++++++ +                                          
   KHJ31505.1  22 AVVVGAGPAGIAVVGNLIEqKKTPILWV--DDEFQAG--RLNKCYREVPSNTRVKLfvafcdalssfkevvkktqrpnayttlqelgqndtchiaeaa 115
                  69***************99456666666..5545444..57778888888887777888886665665555555555555444444444443333333 PP

                  HHHHCHHHHCCCCHC........CTCEEEEESCEEEEETEEEC..................TCEEEEEESEEEE---EEE-BCTCTTC.TTBEECCSE CS
                  xxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxx..................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  58 evvkklnqgielllg........eevvkidpgkkkvklekkke..................gdeekiaydklvlAtGssprdlgipGvaenvgklvrt 129
                  +                       +++++++  ++v+     +                   +  k+  + l+l+tGs p++ ++p    + + l   
   KHJ31505.1 116 D-------------LclmlsqglDQALGVYKRLGTVHSA---SwsdscgwnislkpqanemVELSKFHSKILILCTGSYPKTSPLPVFHLHDIGL--- 194
                  1.............0333333333333344334444443...044478888888888888888899999*****************774444444... PP

                  CHHHHHHCCSS-T........SEEEEES-SHHHHHHHHHHHHHT- CS
                  xxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 130 ldsaealklkllp........krivvvGgGyiGvElAaalaklgk 166
                     + al+  ll          +++v+G++  ++ +   + +l++
   KHJ31505.1 195 ---DLALNPSLLSstlprdskINVAVIGASHSAILVLRNFYNLAS 236
                  ...444444444444447877788*****9999877777766666 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0   0.00028       1.7       1      21 [.      23      43 ..      23      70 .. 0.76
   2 !    4.3   0.0    0.0033        20     165     305 .]     213     365 ..     160     365 .. 0.52

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00028
  Pyr_redox_3  1 iIiGaGPaGlaaaielkkagl 21
                 +++GaGPaG+a+  +l + + 
   KHJ31505.1 23 VVVGAGPAGIAVVGNLIEQKK 43
                 79*********8766655544 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.0033
  Pyr_redox_3 165 qkvvViGgknSavDaAlelvrk......gaeVtvvtrgse.........iekeesdpsyslkpdienrleelvkeekikvlfnaevkeikekeeeykv 247
                   +v+ViG++ Sa+ +  ++++         +++++tr++          i ++++  + +++ + +n+le +  e  +     + +++i+++ +e + 
   KHJ31505.1 213 INVAVIGASHSAILVLRNFYNLassshpSLRIKWFTRHTLryaeerdgwIFNDNTGLKGEVSVWAKNNLEVGALE--LS-PVGKYLEKIDTSGKEDE- 306
                  466777777777666655555422233334555555554311111111123344567777888888888776553..22.23345677776655533. PP

  Pyr_redox_3 248 ktedgkkvevkddvvlatGykpd.lsflkkslfelded..grpvlteeteetnvpglflaG 305
                   +e ++++++ + vv a+G++p  + +l++++  l  +     ++  e+    vpglf aG
   KHJ31505.1 307 -EELKERLNSCTHVVQAIGFTPReIPLLERNGKRLYPNfnHDLQVF-EEHGKSVPGLFGAG 365
                  .333347778888888899998724445554433322210222222.22333367777665 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.5e-05     0.087       1      38 [.      23      57 ..      23     109 .. 0.71
   2 ?    0.1   0.0      0.12     7e+02       1      34 [.     216     250 ..     216     258 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.5e-05
  NAD_binding_9  1 aivGaGprGlavlerLlarakkkspleitlfdp.sepga 38
                   ++vGaGp+G+av+ +L++++    ++ i  +d+  ++g+
     KHJ31505.1 23 VVVGAGPAGIAVVGNLIEQK----KTPILWVDDeFQAGR 57
                   69*****************5....555666665355554 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.12
  NAD_binding_9   1 aivGaGprGlavlerLlara.kkkspleitlfdps 34 
                    a++Ga  ++++vl+++ + a +++ +l+i+ f ++
     KHJ31505.1 216 AVIGASHSAILVLRNFYNLAsSSHPSLRIKWFTRH 250
                    79**************9999777888999887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3024.00
//
Query:       KHJ31506.1  [L=186]
Description: hypothetical protein EV44_g0531 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       303  (0.0169); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 1332.63
//
Query:       KHJ31507.1  [L=901]
Description: putative cell wall proline rich protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (901 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       517  (0.028836); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.41
# Mc/sec: 6550.21
//
Query:       KHJ31508.1  [L=99]
Description: putative mitochondrial atpase inhibitor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-24   84.9   1.4    4.4e-24   84.7   1.4    1.0  1  IATP        Mitochondrial ATPase inhibitor, IATP
     0.0073   16.4   1.1     0.0099   16.0   1.1    1.2  1  Mod_r       Modifier of rudimentary (Mod(r)) protein
  ------ inclusion threshold ------
      0.047   13.3   3.5       0.15   11.7   2.8    2.1  2  Vac_Fusion  Chordopoxvirus multifunctional envelope protein A


Domain annotation for each model (and alignments):
>> IATP  Mitochondrial ATPase inhibitor, IATP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.7   1.4   7.4e-28   4.4e-24       3      97 ..       3      91 ..       1      92 [. 0.89

  Alignments for each domain:
  == domain 1  score: 84.7 bits;  conditional E-value: 7.4e-28
        IATP  3 rqtlaktltasrpvsaasfsvaarrmgEgdsGapkgtGggGsireagdafgkrEaAsEeeyirqrekekLaeLkeklaeqkeHleeleeHieait 97
                rq + +  ++++    a++s++ar m+ gd+Gapk++G+     ++gdaf++rE+A+E+++i+ re+ekL+eL++k+ eq+ Hl++le+H ++++
  KHJ31508.1  3 RQLISRSFKLKSSF-YAALSTTARPMAAGDTGAPKSGGA-----QSGDAFSRREKANEDMAIKAREREKLLELRKKISEQHDHLNRLEKHLDDLA 91
                66667777555554.6788999****************9.....9**********************************************9885 PP

>> Mod_r  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   1.1   1.7e-06    0.0099      39      83 ..      50      93 ..      41      98 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.7e-06
       Mod_r 39 laeneslaeknlslepeleelrselqekleelkelekefeekeqe 83
                +++ne++a  +  ++++l elr++++e++++l++lek ++++ +e
  KHJ31508.1 50 EKANEDMAI-KAREREKLLELRKKISEQHDHLNRLEKHLDDLANE 93
                567888877.5556778**********************998765 PP

>> Vac_Fusion  Chordopoxvirus multifunctional envelope protein A27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0         1     6e+03       4      16 ..       4      16 ..       3      22 .. 0.68
   2 ?   11.7   2.8   2.5e-05      0.15      18      39 ..      68      89 ..      61      92 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1
                HHHHHHHHHHHHH CS
  Vac_Fusion  4 dleerllvlekdf 16
                +l+ r  +l+ +f
  KHJ31508.1  4 QLISRSFKLKSSF 16
                6777777777766 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 2.5e-05
                HHHHHHHHHHHHHHHHH-XXXX CS
  Vac_Fusion 18 lvikcckrvnealkRlEnHleT 39
                ++ k+ +++ + l+RlE+Hl+ 
  KHJ31508.1 68 ELRKKISEQHDHLNRLEKHLDD 89
                567999**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1391  (0.0775838); expected 358.6 (0.02)
Passed bias filter:                      778  (0.0433934); expected 358.6 (0.02)
Passed Vit filter:                        92  (0.00513135); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.36
# Mc/sec: 818.72
//
Query:       KHJ31509.1  [L=257]
Description: putative 40s ribosomal protein s4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-37  126.7   0.2    4.6e-37  125.8   0.2    1.5  1  Ribosomal_S4e  Ribosomal family S4e
      4e-23   80.8   0.1    6.7e-23   80.1   0.1    1.4  1  40S_S4_C       40S ribosomal protein S4 C-terminus
    1.1e-18   67.0   7.0    2.3e-18   66.0   7.0    1.6  1  RS4NT          RS4NT (NUC023) domain
    7.3e-07   28.8   0.0    1.4e-06   27.9   0.0    1.5  1  S4             S4 domain
    5.9e-05   22.9   0.5    5.9e-05   22.9   0.5    2.8  3  KOW            KOW motif
  ------ inclusion threshold ------
       0.13   11.6   0.0       0.22   10.9   0.0    1.3  1  Sipho_tail     Phage tail protein


Domain annotation for each model (and alignments):
>> Ribosomal_S4e  Ribosomal family S4e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.8   0.2   1.6e-40   4.6e-37       1      75 []      95     169 ..      95     169 .. 0.99

  Alignments for each domain:
  == domain 1  score: 125.8 bits;  conditional E-value: 1.6e-40
                    TTEEEEEEE-TTSSEEEEEE-TTCCCEEEEEECEEEEECCCEEEEEETTS-EEEESSTT-STTEEEEEETTTTEE CS
  Ribosomal_S4e   1 tgenyrllydtkgrfalhkItseeakyKLcKikkkttvkkgipqlvthdGrtirypdpdikvnDtvkidleenkI 75 
                    tge++rl+ydtkgrf++h+I+seea+yKL K+k+++++k+gip lvthd+rtirypdp ikvnDtvkidl ++kI
     KHJ31509.1  95 TGEYFRLIYDTKGRFTVHRIQSEEAEYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKI 169
                    89************************************************************************9 PP

>> 40S_S4_C  40S ribosomal protein S4 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.1   0.1   2.2e-26   6.7e-23       1      47 [.     212     257 .]     212     257 .] 0.96

  Alignments for each domain:
  == domain 1  score: 80.1 bits;  conditional E-value: 2.2e-26
                 -SSS-EEEEEGGGEEE--STTS-SS---SS-S----HHHHHHHHHHH CS
    40S_S4_C   1 DaaGntFATRlsNvFvIGkgnkpwvsLPkgkGiklsiaeerdkrlak 47 
                 Da +n FATR  NvFvIG  +kpw+sLPkgkG+kl+iaeerd+r+a+
  KHJ31509.1 212 DAIDNVFATREGNVFVIGS-DKPWISLPKGKGVKLTIAEERDRRRAA 257
                 99****************5.9***********************985 PP

>> RS4NT  RS4NT (NUC023) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.0   7.0   7.8e-22   2.3e-18       1      37 []       3      39 ..       3      39 .. 0.98

  Alignments for each domain:
  == domain 1  score: 66.0 bits;  conditional E-value: 7.8e-22
                -S----EETTTS-TTS---SSSSSEE----SSSS-TT CS
       RS4NT  1 rGpkkHLKrlaAPkhWpldkkegvfavkPspGPHklr 37
                rGpkkH Krl+AP+hW+ldk++g +a++PspGPHklr
  KHJ31509.1  3 RGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLR 39
                8**********************************97 PP

>> S4  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   4.6e-10   1.4e-06       3      48 .]      44      90 ..      42      90 .. 0.93

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 4.6e-10
                HHHHH.HHTTSSSSHHHHHHHHHTTTEEETTEEE--TT-EE-TTCEE CS
          S4  3 Ldkvl.arlglassrreArqlIehGrVlVNGkvvkdpsyrVkpgDvi 48
                L +++  rl++a   re + +++++ ++V+Gkv++d  y+ +++Dvi
  KHJ31509.1 44 LIIFIrNRLKYALNARETKAIVMQRLIKVDGKVRTDTTYPAGFMDVI 90
                56677789*************************************98 PP

>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1      0.71   2.1e+03      16      26 ..     123     133 ..     122     141 .. 0.76
   2 ?   -3.6   0.1       4.1   1.2e+04       2       7 ..     157     162 ..     156     163 .. 0.72
   3 !   22.9   0.5     2e-08   5.9e-05       2      31 ..     178     210 ..     177     211 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.71
                 EEEEEEEETTT CS
         KOW  16 tGkVvkvdqhk 26 
                  GkV++v   k
  KHJ31509.1 123 LGKVKRVQLGK 133
                 799*9998665 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 4.1
                 TSEEEE CS
         KOW   2 GdhVkV 7  
                  d+Vk+
  KHJ31509.1 157 NDTVKI 162
                 688887 PP

  == domain 3  score: 22.9 bits;  conditional E-value: 2e-08
                 TSEEEESSSTTTTCEEEEEEEETTT...TEEEE CS
         KOW   2 GdhVkVvsGphkGktGkVvkvdqhk...vrVfv 31 
                 G + ++++G+++G++G+++++++h    ++V++
  KHJ31509.1 178 GTIAMITGGRNMGRIGVITHRERHDggfNIVHL 210
                 66789********************99999996 PP

>> Sipho_tail  Phage tail protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   7.4e-05      0.22     152     207 ..      80     171 ..      45     191 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 7.4e-05
  Sipho_tail 152 Gtveadpiieitlngengylgiinnkttgeylkvggpe......................................fkaGDvieidvenrkvlv 207
                  t++a     i ++++ +y+ +i   +t ++++v + +                                      +k +D+++id++++k++ 
  KHJ31509.1  80 TTYPAGFMDVISIEKTGEYFRLIY--DTKGRFTVHRIQseeaeyklgkvkrvqlgkggipflvthdartirypdpaIKVNDTVKIDLATGKITD 171
                 444444443344466666666665..66666665555566677777777777777777777777777777777777*************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.36
# Mc/sec: 2137.30
//
Query:       KHJ31510.1  [L=464]
Description: putative v-snare microsporum canis [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-07   30.3   0.0    1.5e-05   24.8   0.0    2.8  2  SIP1      Survival motor neuron (SMN) interacting protein 1 (


Domain annotation for each model (and alignments):
>> SIP1  Survival motor neuron (SMN) interacting protein 1 (SIP1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   8.4e-10   1.5e-05      15     191 ..      67     262 ..      59     269 .. 0.67
   2 ?   -0.3   0.0      0.04   7.2e+02     202     218 ..     434     450 ..     400     451 .. 0.83

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 8.4e-10
        SIP1  15 edgeeYLrrVryEakrcpdVvvakidpsklakkq...............tvympsipeiakcp...esllPtkeWeqeqladFselRqklsalreelqk 95 
                 ++++ YL  Vr Ea  +p V  a  ++s  ++ q                +y++ ++ + +++   +sl P+    ++  +  ++l ++  a    ++k
  KHJ31510.1  67 KNALAYLTAVREEAIGIPTVLFAP-KTSSKNDDQsllddlgdstsryedGAYLSISSPVLETEreeSSLEPSLFIISRYERLHADLHRTPPA--GLVSK 162
                 68899******************5.3333333344777777776666663333333333322222366666664444444444444443331..11222 PP

        SIP1  96 kekkqkikl.pkikdeekwkefclgegnePllsillsldqvtveslleyliewleeeeelske..laqWlyallavlekP..LdadtcsalRsllrkca 189
                  +  q++++ p  kd ++w    l++  +P   +++s+d+ tv +ll  l++    + +l+++  l+ W+++lla+l     L ++ ++++R l +k++
  KHJ31510.1 163 LKPYQRTHVgPLDKDLSRWWIGHLRN-ANPNPAQVASMDKITVLRLLGLLTQGSVLKTGLKSSscLSLWIWSLLARLPDRgdLSSEEIAVVRGLGKKAI 260
                 22222444416666777755555555.49**********************99998888888744678*********87444**************998 PP

        SIP1 190 kl 191
                 +l
  KHJ31510.1 261 SL 262
                 76 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.04
        SIP1 202 lamlnllitiigryFgQ 218
                  a++++++ti+g+ +gQ
  KHJ31510.1 434 QATVDMILTIVGESYGQ 450
                 456899**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.37
# Mc/sec: 3774.33
//
Query:       KHJ31511.1  [L=166]
Description: putative heat shock protein 30 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-18   66.6   0.0    1.2e-17   63.9   0.0    2.0  1  HSP20       Hsp20/alpha crystallin family
    0.00022   20.7   0.0     0.0009   18.8   0.0    1.9  1  ArsA_HSP20  HSP20-like domain found in ArsA


Domain annotation for each model (and alignments):
>> HSP20  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.9   0.0   1.3e-21   1.2e-17       1     101 [.      50     165 ..      50     166 .] 0.94

  Alignments for each domain:
  == domain 1  score: 63.9 bits;  conditional E-value: 1.3e-21
                 E--SSEEEEEEEEE-TT--CCCEEEEEETTE.EEEEEE--...................---TT----SS---EEEEEE--STTB-TTT-EEEEETTEE CS
       HSP20   1 dikeeeeefevkldvpglkkeelkvkvednr.vlvkgehe.................eeeedekglikerssrkFsrkftLPenvdadkvkaslkdGvL 81 
                 dike   ++++  + pg+++++++++ +d + ++++g  e                 ++e d+++++ ers+++Fsr+f  P  vd+d vkaslk+G+L
  KHJ31511.1  50 DIKELSGSYQLYGEFPGIEQKDIEIEFTDAStLTISGRSErsyddrsgsnstkkseaTKETDSTFWVLERSVGEFSRSFGFPIPVDQDGVKASLKNGIL 148
                 68899999*******************998769999999999************999999999************************************ PP

                 EEEEEBSS--..-------- CS
       HSP20  82 tvtvpkkepekkkkerkiqi 101
                 +v+vpk++++   ++rki i
  KHJ31511.1 149 RVEVPKTKKQ---ESRKITI 165
                 ******9999...6688877 PP

>> ArsA_HSP20  HSP20-like domain found in ArsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0     1e-07    0.0009       3      62 ..      57     151 ..      55     152 .. 0.94

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1e-07
  ArsA_HSP20   3 eyvlkldLPfvdkeeidlsrs.gdeLtIkig...................................nfrRqitLPsvlarkevtsAkfedgvLeIr 62 
                  y+l  + P++++++i+++ + +++LtI+                                      f+R++  P  ++++ v +A++++g L+++
  KHJ31511.1  57 SYQLYGEFPGIEQKDIEIEFTdASTLTISGRsersyddrsgsnstkkseatketdstfwvlersvgEFSRSFGFPIPVDQDGV-KASLKNGILRVE 151
                 67777789**********87669**********************************************************99.**********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       631  (0.0351944); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.35
# Mc/sec: 1426.12
//
Query:       KHJ31512.1  [L=466]
Description: putative pantothenate kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.4e-145  484.6   0.5   1.8e-145  484.2   0.5    1.1  1  Fumble    Fumble


Domain annotation for each model (and alignments):
>> Fumble  Fumble
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  484.2   0.5    1e-149  1.8e-145       1     330 []      90     435 ..      90     435 .. 0.95

  Alignments for each domain:
  == domain 1  score: 484.2 bits;  conditional E-value: 1e-149
      Fumble   1 hiavDiGgsLaKlvYfsrkkkksaaekekeeeveeeeeseelggrLhfikfetekieevleflkelllkskekekkkk...tikaTGGGaykyaelike 96 
                 hiavDiGgsLaKlvYfsr                 e +s++ ggrL+f ++ete++++++ef+k+l  k++  + ++    +++aTGGGayk++++ike
  KHJ31512.1  90 HIAVDIGGSLAKLVYFSR-----------------ELHSQDPGGRLNFKNYETEYVDDCVEFMKQLKAKQQMLNGSQPgelCVMATGGGAYKFYDKIKE 171
                 89****************.................668899*************************988888766655999****************** PP

      Fumble  97 elgvevekedemeclikGlkfllteipkevftyseekpkkavekkeseeiyPylLvniGSGvsilkvegeekfervgGtslgGgtfwGLlslLtgaksf 195
                 +lgv+v +edemecli Gl+f++teip+evftyse++  ++ e   ++++yPylLvniGSGvs++kv+g++++ervgGtslgGgt+wGLlslLtga+sf
  KHJ31512.1 172 ALGVDVLREDEMECLIIGLDFFITEIPREVFTYSESDLISFEE--PRSNVYPYLLVNIGSGVSMIKVSGPRSYERVGGTSLGGGTLWGLLSLLTGARSF 268
                 **********************************643444444..5889************************************************** PP

      Fumble 196 dellelaekGdnskvDmlvgDiyGedyekiglksdliassfgkvfkkkkkkeeeek................................eDiarslLyai 262
                 de+l +ae+Gdn+kvDmlvgDiyG+dy+kiglks++iassfgkvfk+k+++e+e +                                +D++rslLyai
  KHJ31512.1 269 DEMLGMAERGDNTKVDMLVGDIYGTDYGKIGLKSSTIASSFGKVFKMKREAEREAEdsgglnnrdsrsgiysisssetedlecspfsaADVSRSLLYAI 367
                 ***********************************************9777766669****************************************** PP

      Fumble 263 snnigqiaylqaklhnlkriyFgGsfirgheqtmktlsyaikfwskgelkalFlrHegylGavGaflk 330
                 snnigqiaylq+++h+l++iyFgGsfirgh+qtm+tlsyaikfws+g++ka+F+rHegylGavGaflk
  KHJ31512.1 368 SNNIGQIAYLQSEKHSLSTIYFGGSFIRGHRQTMNTLSYAIKFWSNGQKKAYFVRHEGYLGAVGAFLK 435
                 ******************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (466 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.36
# Mc/sec: 3846.80
//
Query:       KHJ31513.1  [L=554]
Description: hypothetical protein EV44_g3182 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       490  (0.02733); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.37
# Mc/sec: 4505.28
//
Query:       KHJ31514.1  [L=81]
Description: hypothetical protein EV44_g3789 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 611.01
//
Query:       KHJ31515.1  [L=523]
Description: putative serine protease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.1e-34  117.9   8.9      1e-33  116.9   8.9    1.4  1  Peptidase_S8  Subtilase family
    8.2e-21   74.5   0.5    1.8e-20   73.4   0.5    1.6  1  Inhibitor_I9  Peptidase inhibitor I9


Domain annotation for each model (and alignments):
>> Peptidase_S8  Subtilase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.9   8.9   1.1e-37     1e-33       1     278 [.     172     414 ..     161     448 .. 0.88

  Alignments for each domain:
  == domain 1  score: 116.9 bits;  conditional E-value: 1.1e-37
                   -TT-EEEEECS-B-TT-TTTGGGEEE..EEEE---TTSG.GGEETT-SS-TT-SC-SSS....HHHHHHHHHH-B..SSSSSB-SSTTSEEEEEE-S CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8   1 gkgvlvavlDtGvdpshpdlsvttdgerklvdvideegagfngadsettstnwarddngnsieHGthvAGiaaanapeegekngvapgakilsvkvl 97 
                   gkgv v v+DtG   +h +++                    ++a+  +t++ ++ d++gn   HGth+ G++a++      k gva +a i++vkvl
    KHJ31515.1 172 GKGVDVYVIDTGTFIEHHEFE--------------------GRASWGKTIPLNDFDEDGNG--HGTHCSGTIAGK------KYGVAKEANIIAVKVL 240
                   677777777777777777766....................56777777877777777766..************......9*************** PP

                   STTSB-HH..HHHHHHHHHHHHCT-S............EEEE-EESCETTCHHCHHHHHHHHHHHH.CCT-EEEEE--SS-T-HHEEE-TTCEECTT CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8  98 dtsggsmetgteliraieeaaedkvd............vinmslgestslpktgrsiealainravnkkgvlvviSaGNngktgsslqagspvgtps 182
                   + +g+ +   +++i++i++a  ++ +            v nmslg +++ +  +      a+n av ++g+ + ++aGN++       a s  ++p+
    KHJ31515.1 241 SSNGSGSM--SDVIKGIDYATSSHLEnvknkkkgfkgsVANMSLG-GDKSKALDY-----AVNGAV-SSGIHFAVAAGNDN-------ADSCSYSPA 321
                   99998774..9**********************************.555555553.....9*****.9*************.......7777899** PP

                   TSTTCEEEEEESTTSSB-TT--B-TT.......-EEEE-S-CCCCCCCCCHHHTTTHHEEEE-SHHHCHHHHHHHHHHHHHHHTT.........--H CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxx RF
  Peptidase_S8 183 tsknvitvgayttegkiapfSsrGpssdgklkpdivapGgnivstwsrqsnnsaglssyqsmsGTSmAsPnaagaaAlllsalpk.........ltp 270
                    ++ +itvga t +++ a+fS++G++       di apG ni s w   +      s ++++sGTSmAsP++ag +A  ls  p+         +tp
    KHJ31515.1 322 AAELAITVGASTLDDERAYFSNYGKCN------DIFAPGLNIQSAWIGSK------SAVNTISGTSMASPHIAGLLAYYLSLQPDidseyavspITP 406
                   **************************9......6*******999998888......3489************************9999999888888 PP

                   HHHHHHHH CS
                   xxxxxxxx RF
  Peptidase_S8 271 etvraall 278
                   e++++ ++
    KHJ31515.1 407 EELKKSII 414
                   88887665 PP

>> Inhibitor_I9  Peptidase inhibitor I9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.4   0.5     2e-24   1.8e-20       1      81 [.      40     132 ..      40     133 .. 0.92

  Alignments for each domain:
  == domain 1  score: 73.4 bits;  conditional E-value: 2e-24
                   EEEEEE-TTS-HHHHHHHHHHHHH....H........HHHTT.......--EEEEEEESS..SSSEEEEEE-GGGHHHHHTSTTEEEEEEEEEEEE CS
  Inhibitor_I9   1 vYIVtfkeaakaakkassheswhqsllks........vlkge.....dsakagilysYki..lfnGfavklteeqaeklrkrpeVesVepDqsvrl 81 
                   +YIV+fk+++++++ a +h++w ++++++         +  +     ++ + g++++Y+i  +f G++++++++++e++rk+p+Ve+Ve+D++v++
    KHJ31515.1  40 SYIVVFKKHVTETS-AGDHHNWLDQIHNQaetqrtelRK--RsqspiNDLFQGLKHKYNIagRFIGYSGHFDDQVIEEVRKHPDVEFVEKDSIVHT 132
                   6*************.*************99988886422..246899***********************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       810  (0.0451782); expected 358.6 (0.02)
Passed bias filter:                      659  (0.0367561); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.40
# Mc/sec: 3922.85
//
Query:       KHJ31516.1  [L=1077]
Description: hypothetical protein EV44_g1944 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1077 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       993  (0.0553851); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.74u 0.29s 00:00:01.03 Elapsed: 00:00:00.46
# Mc/sec: 7050.96
//
Query:       KHJ31517.1  [L=447]
Description: putative tubulin beta chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.7e-68  229.6   0.0    6.9e-68  228.7   0.0    1.5  1  Tubulin          Tubulin/FtsZ family, GTPase domain
    1.6e-42  144.7   0.1    2.5e-42  144.0   0.1    1.3  1  Tubulin_C        Tubulin C-terminal domain
    4.6e-05   23.7   0.1    0.00013   22.2   0.0    1.8  2  Misat_Tub_SegII  Misato Segment II tubulin-like domain
     0.0026   17.0   0.0      0.024   13.8   0.0    2.0  2  Tubulin_2        Tubulin like
     0.0035   17.1   0.0     0.0069   16.1   0.0    1.5  1  Tubulin_3        Tubulin domain
  ------ inclusion threshold ------
        0.1   12.1   0.0       0.18   11.4   0.0    1.3  1  TrmK             tRNA (adenine(22)-N(1))-methyltransferase


Domain annotation for each model (and alignments):
>> Tubulin  Tubulin/FtsZ family, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  228.7   0.0   2.3e-71   6.9e-68       1     196 [.       3     211 ..       3     212 .. 0.98

  Alignments for each domain:
  == domain 1  score: 228.7 bits;  conditional E-value: 2.3e-71
                 EEEEEEEHHHHHHHHHHHHH...HHHCH..............HHHT.....TTEEEEE....EEESBHHHHHTS-GS........EEEE--CCCCTTC- CS
     Tubulin   1 eiivigvGqcGnqignelwellakehgiqsdg..........dslesfFsesgkveyiprsvaidtdpqvlneikags..elfnpnklllgkegagnng 87 
                 ei++++ GqcGnqig ++w+++  ehg++ +g          ++++++F+e + ++y+pr+v++d++p ++++++ag+  +lf+p+++++g++gagnn+
  KHJ31517.1   3 EIVHLQTGQCGNQIGAAFWQTISGEHGLDGSGvyngtsdlqlERMNVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPfgQLFRPDNFVFGQSGAGNNW 101
                 79**************************75559****************************************************************** PP

                 -TT-HHHHHHHHHHTHHHHHHHHTT-SE.SEEEEEEETTSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE--.GG.G-HHHHHHHHHHHHHHHHT-SEEE CS
     Tubulin  88 aggypevgkeaaeeileeirkevekcdslqgffitaslgGGTGSGlgpvilevlkeeypkalvvtvvvlPs.efsevvvepynailalkelieesdavi 185
                 a+g+++ g+e+ +++l+ +r+e+e+cd+lqgf+it+slgGGTG G+g++++++++ee+p++++ t++v+Ps + s+ vvepyna l++++l+e+sd ++
  KHJ31517.1 102 AKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSpKVSDTVVEPYNATLSVHQLVENSDETF 200
                 *************************************************************************************************** PP

                 EEEHHHHHCCS CS
     Tubulin 186 vidNdaLlkil 196
                 +idN+aL++i+
  KHJ31517.1 201 CIDNEALYEIC 211
                 **********9 PP

>> Tubulin_C  Tubulin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.0   0.1   8.5e-46   2.5e-42       1     124 [.     261     381 ..     261     383 .. 0.99

  Alignments for each domain:
  == domain 1  score: 144.0 bits;  conditional E-value: 8.5e-46
                 TTC-EEEEEEESSSCTTTTTCS-HHHHHHHHHTCSGGGBSSSTSTTTSSEEEEEEEEEESSSHHHHHHHHHHHHHTTTS-BSTTSTTTEEEEEEECECT CS
   Tubulin_C   1 PrlhFlltsyaPlvsaekaavektsvqdvtrallepknimvkvdprkgkylaiallirGdvepkevnkavqrikekkkaqfveWiptgikvalnkkspy 99 
                 PrlhF+++++aPl+s+ +++++  +v ++t+++++pkn+m+++d r+g+yl++++++rG+v++kev+++++++++k++a+fveWip+++++al++ +p 
  KHJ31517.1 261 PRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMYDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSAYFVEWIPNNVQTALCSIPPR 359
                 9************************************************************************************************** PP

                 -TTTSSCEEEEEEEEGGGHHHHHHH CS
   Tubulin_C 100 vkkqskvsvlmlaNttsiaelfkrl 124
                 + k+s    ++++N+tsi+elfkr+
  KHJ31517.1 360 GLKMS---STFVGNSTSIQELFKRV 381
                 ***99...9**************98 PP

>> Misat_Tub_SegII  Misato Segment II tubulin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   4.5e-08   0.00013       1      68 [.       2      71 ..       2      84 .. 0.75
   2 ?   -3.6   0.2       4.4   1.3e+04      86     102 ..     422     438 ..     406     446 .. 0.46

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 4.5e-08
  Misat_Tub_SegII  1 rEivtlqlGnyaNyvgtHfWNtQesyf......tydeeeeesevdhdvlfregetkqgqvtytPRllivDlkgs 68
                     rEiv lq G+  N +g+ fW t           +y+ +++  ++++   +++   +    +y+PR+++vDl+ +
       KHJ31517.1  2 REIVHLQTGQCGNQIGAAFWQTISGEHgldgsgVYNGTSD-LQLERMNVYFN---EASGNKYVPRAVLVDLEPG 71
                     8********************9654442265556666666.67766555655...345689*********9754 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 4.4
  Misat_Tub_SegII  86 eseeseaatwdgklevq 102
                       ++ ++a++ +g+ +++
       KHJ31517.1 422 YQQYQDASISEGEEDYE 438
                      33333333333344443 PP

>> Tubulin_2  Tubulin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   8.1e-06     0.024     158     203 ..     133     176 ..     102     191 .. 0.78
   2 ?    0.8   0.0     0.072   2.2e+02      46     104 ..     295     348 ..     234     356 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 8.1e-06
   Tubulin_2 158 vfVvgSLaGGTGSGiflDvayllrkilkeekqkvkiiglvllPdvf 203
                 + +  SL GGTG+G+   ++  +r+++++      ++ +v++P+v 
  KHJ31517.1 133 FQITHSLGGGTGAGMGTLLISKIREEFPDRMM--ATFSVVPSPKVS 176
                 66899************************997..699999999986 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.072
   Tubulin_2  46 nrlkdatdetaekageslksrekealsissaevdrilrnllreetasaypsieeWlppe 104
                 ++++   ++ + + g++l++++ +  ++s +ev++ +rn ++++      +  eW+p++
  KHJ31517.1 295 DPKNMMAASDF-RNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNS----AYFVEWIPNN 348
                 33333333333.578888999888889*******99999966654....4678999876 PP

>> Tubulin_3  Tubulin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   2.3e-06    0.0069      64     145 ..     120     195 ..     100     245 .. 0.71

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2.3e-06
   Tubulin_3  64 lrpfaeecdqlrglqvftgvddaWG.GfaakylerlrdeygkksilvWvlaleeklkkkkkaklerklkklnkarslkelseq 145
                 +r  ae cd l+g+q+  +     G G ++  + ++r+e++ + + ++ +  + k+++         ++  n + s+++l e+
  KHJ31517.1 120 VRREAEGCDCLQGFQITHSLGGGTGaGMGTLLISKIREEFPDRMMATFSVVPSPKVSD-------TVVEPYNATLSVHQLVEN 195
                 68889**************99877769***************9987775533222221.......223344555555555554 PP

>> TrmK  tRNA (adenine(22)-N(1))-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   5.9e-05      0.18      35     135 ..     107     211 ..      98     229 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.9e-05
        TrmK  35 esAkknvkkskleekievrlgdGlavlekedeidviviaGmGgalIaeILeegkekLkkvkrliLQpnnqeeelRewlskns.yei...kaEkileekk 129
                  ++ + v +     + e    d l+ ++ + +++  + aGmG  lI++I ee  +++  +  ++  p+ + + +  +    s +++    +E+ + +++
  KHJ31517.1 107 TEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSvHQLvenSDETFCIDNE 205
                 555555555555555555566778888889999999********************9999999999999988887775443312331115789999999 PP

        TrmK 130 kiYeil 135
                  +Yei 
  KHJ31517.1 206 ALYEIC 211
                 999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3361.30
//
Query:       KHJ31518.1  [L=499]
Description: putative hmg box protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.1e-15   55.2   1.7    2.1e-14   53.6   1.7    1.9  1  HMG_box    HMG (high mobility group) box
    2.6e-13   50.3   1.8    8.3e-13   48.7   1.8    1.9  1  HMG_box_2  HMG-box domain
    2.5e-09   37.4   0.1    4.6e-09   36.6   0.1    1.4  1  SAM_1      SAM domain (Sterile alpha motif)
    2.8e-06   27.3   0.1    7.8e-06   25.9   0.1    1.8  2  SAM_2      SAM domain (Sterile alpha motif)
  ------ inclusion threshold ------
       0.13   12.3   0.0       0.42   10.7   0.0    1.8  2  NCD1       NAB conserved region 1 (NCD1)


Domain annotation for each model (and alignments):
>> HMG_box  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   1.7     6e-18   2.1e-14       1      69 []     114     180 ..     114     180 .. 0.97

  Alignments for each domain:
  == domain 1  score: 53.6 bits;  conditional E-value: 6e-18
                 --SS--HHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     HMG_box   1 pkRplsafflfskeqraklkaenPelknaeiskklgekWkalseeeKkkYeekaekekaryekekpeyk 69 
                 p Rp+sa+++fs+++r++lk  n  l+ +ei+k +gekW++ls  +K+++e++a+ +k++y+ e  eyk
  KHJ31518.1 114 PERPPSAYVIFSNKMREELKGRN--LSFTEIAKLVGEKWQNLSFTQKEQFEQQASTAKEKYNNELIEYK 180
                 78******************996..9**************************************99997 PP

>> HMG_box_2  HMG-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   1.8   2.3e-16   8.3e-13       2      72 ..     112     179 ..     111     180 .. 0.95

  Alignments for each domain:
  == domain 1  score: 48.7 bits;  conditional E-value: 2.3e-16
                 --.-SS--HHHHHHHTTHHHHHHHT---SSHHHHTGGGHHHHHHS-HHHHHHHHHHHHHHHHHHHH-SS-- CS
   HMG_box_2   2 kkpkaarnAYalfvqemipelkrkGnpviglaevsklcsekWkalseeeKekYeekAkedkkrydrealty 72 
                 + p ++++AY++f  +m++elk +      + e+ kl++ekW++ls  +Ke++e++A   k++y++e  +y
  KHJ31518.1 112 NAPERPPSAYVIFSNKMREELKGR---NLSFTEIAKLVGEKWQNLSFTQKEQFEQQASTAKEKYNNELIEY 179
                 5699******************99...899***********************************997766 PP

>> SAM_1  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.6   0.1   1.3e-12   4.6e-09      14      61 ..      10      57 ..       2      60 .. 0.93

  Alignments for each domain:
  == domain 1  score: 36.6 bits;  conditional E-value: 1.3e-12
                HTTSGGGHHHH.HTTTSSHHHHTTSCHHHHHHCTTTSHHHHHHHHHHHH CS
       SAM_1 14 siglgqYadlF.rageidgdaLlllteddLeklgvtllGHrkkIlyaIq 61
                ++gl+qY d F  +g+++++++l+++e+d+  l+v+l GHr+k+++ I 
  KHJ31518.1 10 ELGLCQYLDDFiDQGFDSWQTILDIQESDFDVLKVKL-GHRRKLQRKIA 57
                69*********************************88.*******9996 PP

>> SAM_2  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.1   2.2e-09   7.8e-06      14      64 ..       9      58 ..       3      60 .. 0.94
   2 ?   -4.1   0.0         5   1.8e+04      24      31 ..     409     416 ..     408     417 .. 0.85

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 2.2e-09
                HHTTTGGGHHHHHHTTCSHHHHHTTSCHHHHHHTTHHHHHHHHHHHHHHHH CS
       SAM_2 14 rsiglkqytdnFrdagitgaelllrlteedLkrlGitsvghrkkilkkiqe 64
                 ++gl+qy d F d+g+++ + +l + e+d   l++ ++ghr+k+ +ki +
  KHJ31518.1  9 AELGLCQYLDDFIDQGFDSWQTILDIQESDFDVLKV-KLGHRRKLQRKIAN 58
                578*********************************.***********975 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 5
                 HHHHTTCS CS
       SAM_2  24 nFrdagit 31 
                 +F+d++i+
  KHJ31518.1 409 IFTDHKID 416
                 8****997 PP

>> NCD1  NAB conserved region 1 (NCD1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00012      0.42      18      46 ..      12      40 ..       3      58 .. 0.84
   2 ?   -3.2   0.0       2.5   8.8e+03      44      54 ..     138     148 ..     134     156 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00012
        NCD1 18 nLlqYydvliaqGGDdveqlleaeeeefl 46
                 L qY d +i+qG D  + +l  +e++f 
  KHJ31518.1 12 GLCQYLDDFIDQGFDSWQTILDIQESDFD 40
                689***********************994 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.5
        NCD1  44 efleimelvGm 54 
                  f ei +lvG 
  KHJ31518.1 138 SFTEIAKLVGE 148
                 69999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1354  (0.0755201); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3575.55
//
Query:       KHJ31519.1  [L=206]
Description: hypothetical protein EV44_g3506 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.075   12.9   0.0        0.3   11.0   0.0    2.0  2  ATP13     Mitochondrial ATPase expression


Domain annotation for each model (and alignments):
>> ATP13  Mitochondrial ATPase expression
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.21   3.8e+03      16      32 ..      41      55 ..      37      78 .. 0.69
   2 ?   11.0   0.0   1.7e-05       0.3      20      80 ..     122     203 ..     116     206 .] 0.64

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.21
       ATP13 16 qlelieklikkvWgiid 32
                +l+++e+ ik+ ++  +
  KHJ31519.1 41 ELRSMEQKIKTAFN--K 55
                56677777777777..3 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 1.7e-05
       ATP13  20 ieklikkvWgiidesgkleeketkvksdsplyP........................tselLkaivssfsynneiesAlklvdkf 80 
                 +++ i+  Wg i+ +g+ ++ ++ v+    +yP                           ++ +i+ssf ++++i+ A+++++++
  KHJ31519.1 122 LKEDIELRWGYINMTGETQD-IQVVT--GTMYPnpvdspvesecegddlnqdhllddGESVVSSIASSFRSCSSIDFAVDYIEFI 203
                 55556666665555554333.22222..234444444445555555555555555558999*********************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1139  (0.0635284); expected 358.6 (0.02)
Passed bias filter:                      831  (0.0463495); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 1517.76
//
Query:       KHJ31520.1  [L=517]
Description: putative protein disulfide isomerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.6e-49  165.5   8.3    1.2e-25   89.5   0.1    4.9  4  Thioredoxin    Thioredoxin
    2.8e-44  151.2   9.9    3.3e-34  118.4   1.8    3.7  4  Thioredoxin_6  Thioredoxin-like domain
    3.1e-11   43.5   1.1      0.026   14.7   0.0    4.4  4  ERp29_N        ERp29, N-terminal domain
    2.4e-10   40.0   3.9    6.8e-10   38.5   3.8    1.8  1  Calsequestrin  Calsequestrin
    2.6e-07   30.7   0.0    0.00031   20.9   0.0    3.4  3  Thioredoxin_7  Thioredoxin-like
    2.1e-05   24.9   0.5     0.0022   18.4   0.1    3.6  3  Thioredoxin_2  Thioredoxin-like domain
    8.5e-05   22.8   0.8        1.2    9.5   0.1    3.6  3  Thioredoxin_8  Thioredoxin-like
     0.0009   19.2   2.2       0.53   10.2   0.0    3.5  3  AhpC-TSA       AhpC/TSA family
     0.0063   16.2   3.9     0.0088   15.8   0.0    3.0  4  Redoxin        Redoxin
  ------ inclusion threshold ------
       0.98    9.5   4.1       0.71   10.0   0.2    3.0  3  EF-hand_6      EF-hand domain


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.7   0.5   3.4e-21   6.1e-18       2     101 ..      23     132 ..      22     134 .. 0.87
   2 ?    3.2   0.0      0.05        89      39     100 ..     173     231 ..     148     234 .. 0.75
   3 !    9.3   0.0    0.0006       1.1      34     100 ..     270     341 ..     244     344 .. 0.77
   4 !   89.5   0.1   6.5e-29   1.2e-25       2     102 ..     367     471 ..     366     472 .. 0.92

  Alignments for each domain:
  == domain 1  score: 64.7 bits;  conditional E-value: 3.4e-21
                  EEESSHHHHHHHHTTTSSEEEEEEE-T.........T.SHHHHCHHHHHHHHHHHCTT.TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEE CS
  Thioredoxin   2 vlvltkenFeeevakekklvlveFyAp.........w.CghCkalaPeleklaeelkd.kvklakvdvdenedlakkyevegiPtlklfkngkevkky 88 
                  v++ltk++F + +++  +lvl +Fy +         w  ghCkalaPe+ek+a++l + k++l+k+d++ +e+l+k+y ve +Ptlk+f+  + v+ y
   KHJ31520.1  23 VVSLTKDTFTNFIKQ-GDLVLAKFYLEslmmhkfnfWkSGHCKALAPEYEKAAQKLMEkKIRLVKIDCTVEEELCKEYRVEDYPTLKIFRGINDVRPY 119
                  678999999999999.88899999876444444444457****************9999*************************************** PP

                  ESS-HHHHHHHHH CS
  Thioredoxin  89 egarekeklaafl 101
                  +g+r++ ++++++
   KHJ31520.1 120 TGNRKAPTIISHM 132
                  *****99998876 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.05
                  HHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTE.EEEEEESS-HHHHHHHH CS
  Thioredoxin  39 eleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngk.evkkyegarekeklaaf 100
                  e++++ae+l+++  +    v + ++lakk +v+ +P+++lfk+ +      +g+ + +++++f
   KHJ31520.1 173 EYTAIAEKLRETYLFG---VIHDSELAKKEGVT-FPAIVLFKSFDeGKVIHNGKIDGDEIKKF 231
                  5666666666433333...44566789999985.9*******988344455677788888877 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.0006
                  HCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-S..SSSEEEEEETTE...EEEEEESS-HHHHHHHH CS
  Thioredoxin  34 kalaPeleklaeelkdkvklakvdvdenedlakkyeve..giPtlklfkngk...evkkyegarekeklaaf 100
                  k+l+ +l  +ae++k+kv +a +d+     +a++++ e   +P++ + + +     + + + + ++e++++f
   KHJ31520.1 270 KSLSDTLRPVAEKFKGKVNFATIDAAIFGAHATNVNLEadKFPAFAIHQTSGnkkFPYDQDKEITAEAIESF 341
                  6788889999****************998888887765227*****99876632223344444555566555 PP

  == domain 4  score: 89.5 bits;  conditional E-value: 6.5e-29
                  EEESSHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTT.....TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTE..EEEEEESS- CS
  Thioredoxin   2 vlvltkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkd.....kvklakvdvdenedlakkyevegiPtlklfkngk..evkkyegar 92 
                  v v++++nF+e v++++k+vl+eFyApwCg Ckal+P++++l + + d     kv++ak+d+++n d  +  e+eg+Pt++lfk+g+  ++  y+g r
   KHJ31520.1 367 VTVVVAKNFDEIVMDDNKDVLIEFYAPWCGYCKALTPKYNTLGKLYIDanltdKVTIAKIDATAN-DFSQ--EIEGFPTIMLFKAGDkkNPLVYDGDR 461
                  678899**************************************999999999**********99.5555..5*************97778899**** PP

                  HHHHHHHHHH CS
  Thioredoxin  93 ekeklaaflk 102
                  + e+l+af+k
   KHJ31520.1 462 DVEELIAFVK 471
                  *******998 PP

>> Thioredoxin_6  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.1   3.7e+03      79     104 ..      23      47 ..      10      51 .. 0.76
   2 !   28.9   0.1   5.5e-10   9.8e-07       8     115 ..      66     176 ..      62     177 .. 0.89
   3 !  118.4   1.8   1.9e-37   3.3e-34       4     183 ..     166     343 ..     163     344 .. 0.91
   4 !   12.0   0.1     8e-05      0.14      39      87 ..     437     486 ..     416     493 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.1
                    EEE-SHHHHHHHHTSS--EEEEEEE- CS
  Thioredoxin_6  79 vreltpenaeelfeeglppllllflk 104
                    v  lt++++ +++++g  ++l+ f+ 
     KHJ31520.1  23 VVSLTKDTFTNFIKQG-DLVLAKFYL 47 
                    7788999999999999.668888875 PP

  == domain 2  score: 28.9 bits;  conditional E-value: 5.5e-10
                    HHHHHHHHTTT-T.T....SEEEEE--HHHHHHTT--S.SEEEEEETTTTEEEEEETHT--HHHHHHHHHHH---SEEE-SHHHHHHHHTSS--EE CS
  Thioredoxin_6   8 eseiFekvakelkgd....vrfgvtkskevadklgvke.pavllfrkfdeekvkydgekitvddlkkfieknslplvreltpenaeelfeeglppl 98 
                    ++ ++ek+a++l+++    v   +t ++e++++++v+  p++++fr+ ++  + y+g+  ++  + + + k+slp v +l++++ e++ + +  +l
     KHJ31520.1  66 LAPEYEKAAQKLMEKkirlVKIDCTVEEELCKEYRVEDyPTLKIFRGINDV-RPYTGN-RKAPTIISHMIKQSLPAVSVLNKDTIEDFKKADQVVL 159
                    56689999999998896666666899***********99********8886.99***9.7899999999999********************9999 PP

                    EEEEE-TTSTTHHHHHH CS
  Thioredoxin_6  99 lllflkkddeeteklkk 115
                    ++++  +d+++++++ +
     KHJ31520.1 160 VAYIDAEDETSNSEYTA 176
                    9***9999999988865 PP

  == domain 3  score: 118.4 bits;  conditional E-value: 1.9e-37
                    STSTHHHHHHHHTTT-T.TSEEEEE--HHHHHHTT--SSEEEEEETTTTEEEEEETHT--HHHHHHHHHHH---SEEE-SHHHHHHHHTSS--EEE CS
  Thioredoxin_6   4 kdkeeseiFekvakelkgdvrfgvtkskevadklgvkepavllfrkfdeekvkydgekitvddlkkfieknslplvreltpenaeelfeeglppll 99 
                    +d++   ++ ++a++l++ + fgv+ ++e+a+k gv++pa++lf+ fde kv  +g+ i+ d++kkf e +s pl++e+ pe++++++++g+p  +
     KHJ31520.1 166 EDETSNSEYTAIAEKLRETYLFGVIHDSELAKKEGVTFPAIVLFKSFDEGKVIHNGK-IDGDEIKKFAEIASTPLIGEIVPETFQTYMSSGVP--I 258
                    57778899*********99*******************************9988886.*********************************99..5 PP

                    EEEE-TTSTTHHHHHHHHHHHHHHTTTT-EEEEEETTGGHHHHHHTT--GGG-SEEEEEESSSS-EEEET..TSS--HHHHHHHHH CS
  Thioredoxin_6 100 llflkkddeeteklkkaiekvakefkdkinfaladaksfkrpleylglsssdlPvivivdsashkykypp..kdefspeklkeFlk 183
                    ++++ +++e  + l+++++ va++fk+k+nfa++da  f+      +l  ++ P+++i + +s+++k+p+  ++e+++e+++ F+ 
     KHJ31520.1 259 AYIFAQTEELQKSLSDTLRPVAEKFKGKVNFATIDAAIFGAHATNVNLEADKFPAFAIHQ-TSGNKKFPYdqDKEITAEAIESFVS 343
                    55555577889999999****************************************777.7777777765778**********96 PP

  == domain 4  score: 12.0 bits;  conditional E-value: 8e-05
                    --S.SEEEEEETTTT.EEEEEETHT--HHHHHHHHHHH---SEEE-SHHHH CS
  Thioredoxin_6  39 vke.pavllfrkfde.ekvkydgekitvddlkkfieknslplvreltpena 87 
                    +++ p++ lf++ d+ ++  ydg+  +v++l  f+++  +    e++ e  
     KHJ31520.1 437 IEGfPTIMLFKAGDKkNPLVYDGD-RDVEELIAFVKQGTHKASVEYSAEMK 486
                    3344*******9555389999998.8***********99999999987765 PP

>> ERp29_N  ERp29, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00018      0.32       3      94 ..      20     114 ..      18     136 .. 0.83
   2 !    6.7   0.0    0.0044       7.8      82     118 ..     201     235 ..     187     242 .. 0.80
   3 !    6.4   0.0    0.0054       9.7      77     117 ..     304     344 ..     266     348 .. 0.92
   4 !   14.7   0.0   1.4e-05     0.026      76     119 ..     432     474 ..     423     477 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00018
                 STT-EEE-TTTHHHHHTTSSEEEEEEEESS--SH.....HHHHHHHHHHHHHHH-SSEEEEEEEEBSSSS-TTHHHHHHTT--TTC-SEEEEESSST CS
     ERp29_N   3 akGavdldevtfekvvekfkyslvkfdtayPyGe.....kheaftalakeaskateellvaevGikdyGekenkelgerykvdkesyPviflfkGda 94 
                 a  +v l + tf   +++   +l kf  +    +     k    +ala e +ka+++l+  ++ +       + el + y+v++  yP++++f+G  
  KHJ31520.1  20 ASDVVSLTKDTFTNFIKQGDLVLAKFYLESLMMHkfnfwKSGHCKALAPEYEKAAQKLMEKKIRLVKIDCTVEEELCKEYRVED--YPTLKIFRGIN 114
                 66789999999**************988766555011114556789*****************9999999999********975..8*******954 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0044
                 TC-SEEEEESSSTTSEEE--TTS---HHHHHHHHHHH CS
     ERp29_N  82 esyPviflfkGdaeepvdlpadgevtvdalkkflkaq 118
                  ++P+i lfk   e  v +  +g++ +d++kkf +  
  KHJ31520.1 201 VTFPAIVLFKSFDEGKVIH--NGKIDGDEIKKFAEIA 235
                 47********998999988..9***********8754 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0054
                 TT--TTC-SEEEEESSSTTSEEE--TTS---HHHHHHHHHH CS
     ERp29_N  77 ykvdkesyPviflfkGdaeepvdlpadgevtvdalkkflka 117
                  +++ +++P++ + +  +++   +  d e+t +a++ f+++
  KHJ31520.1 304 VNLEADKFPAFAIHQTSGNKKFPYDQDKEITAEAIESFVSQ 344
                 5678889*******************************986 PP

  == domain 4  score: 14.7 bits;  conditional E-value: 1.4e-05
                 HTT--TTC-SEEEEES.SSTTSEEE--TTS---HHHHHHHHHHHS CS
     ERp29_N  76 rykvdkesyPviflfk.Gdaeepvdlpadgevtvdalkkflkaqt 119
                  +  + e +P+i+lfk Gd ++p+ +  dg+  v++l +f+k+ t
  KHJ31520.1 432 DFSQEIEGFPTIMLFKaGDKKNPLVY--DGDRDVEELIAFVKQGT 474
                 56667799******************..99999999****99866 PP

>> Calsequestrin  Calsequestrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   3.8   3.8e-13   6.8e-10      38     266 ..      22     251 ..      16     293 .. 0.86

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 3.8e-13
                    -EEEE-CCCHHHHHCC-S.EEEEEEE--STTSCCCC.HHHHHHHHH..HHHHHHHCCCCTEEEEEEETTTTHHHHHCCT--STTEEEEEET.TCEE CS
  Calsequestrin  38 rvvslteknyknvlkkye.vlallyhesveddkvaq.kqfelkelv..lelvaqvledkdvgfvlvdakkeaklakklgldevdslyvlkg.devi 128
                     vvslt+  + n +k+ + vla +y es    k    k  + k l    e +aq l +k++ +v +d+  e +l+k   +++  +l +++g ++v 
     KHJ31520.1  22 DVVSLTKDTFTNFIKQGDlVLAKFYLESLMMHKFNFwKSGHCKALApeYEKAAQKLMEKKIRLVKIDCTVEEELCKEYRVEDYPTLKIFRGiNDVR 117
                    69**************99689*********9998752677888887336789***************************************44577 PP

                    EE-S--SHHHHHHHHHCCCS-SEEEE-SHHHHHHHHH--SS-EEEEE-S-TTSHHHHHHHHHHHCCTTTSEEEEE--HHHHHHCT--TTEEEEE-T CS
  Calsequestrin 129 eydgefaadvlveflldlledpveliesklelqaferiedeikligyfkskeseyykafeeaaeefqpyikffatfdkkvakklslklnevdfyea 224
                     y g+  a +++  ++      v +++    ++ f++  d++ l+ y+ +++      +   ae+++    f    d+++akk  + +  + ++++
     KHJ31520.1 118 PYTGNRKAPTIISHMIKQSLPAVSVLNK-DTIEDFKK-ADQVVLVAYIDAEDETSNSEYTAIAEKLRETYLFGVIHDSELAKKEGVTFPAIVLFKS 211
                    8***************999999999885.57999987.699**************************9999************************* PP

                    T-SS-EE-SSSS--HHHHHHHHHHCSS-SEEE--CCCHHHHH CS
  Calsequestrin 225 fmeepvaipdkpyseeelvefvkehrrstlrklkpedmyetw 266
                    f e  v i +     +e+ +f +    + + ++ pe + +t+
     KHJ31520.1 212 FDEGKV-IHNGKIDGDEIKKFAEIASTPLIGEIVPETF-QTY 251
                    976666.555566778999**99999999999999864.444 PP

>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.026        47      29      79 ..      60     108 ..      55     112 .. 0.73
   2 ?    1.4   0.0      0.21   3.8e+02      34      68 ..     142     179 ..     123     211 .. 0.64
   3 !   20.9   0.0   1.7e-07   0.00031      16      82 ..     382     447 ..     377     448 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.026
                    -HHHHHHHHHHHH-HHHHH.HHHT-EEEEESS--S-GGG.-TT---....SSEEE CS
  Thioredoxin_7  29 cftCqalerdflsdeevkaalaekfvllrvdvterdanileldeqg....vPvva 79 
                    +++C+al+ + +++   ++++ +k+ l+++d t +++   +    +    +P++ 
     KHJ31520.1  60 SGHCKALAPEYEKA--AQKLMEKKIRLVKIDCTVEEELC-KE---YrvedYPTLK 108
                    57888888888777..8999************9888744.22...2223466665 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.21
                    HHHHHHHH-HHHHH.HHHT-EEEEESS...--S-GGG..... CS
  Thioredoxin_7  34 alerdflsdeevkaalaekfvllrvdv...terdani....l 68 
                    +l++d+++d  +k+  a+++vl+ + +   ++++ ++     
     KHJ31520.1 142 VLNKDTIED--FKK--ADQVVLVAYIDaedETSNSEYtaiaE 179
                    566777766..777..78999999877666555555555441 PP

  == domain 3  score: 20.9 bits;  conditional E-value: 1.7e-07
                    HT--EEEEE--TT-HHHHHH..HHHHHH-HHHHH.HHHT-EEEEESS--S-GGG.-TT---SSEEEEE- CS
  Thioredoxin_7  16 rgkpvlvffgaswcftCqal..erdflsdeevkaalaekfvllrvdvterdanileldeqgvPvvafld 82 
                    ++k+vl+ f a wc++C+al  + ++l + +++a l++k+   ++d t +d ++ e   +g+P++++++
     KHJ31520.1 382 DNKDVLIEFYAPWCGYCKALtpKYNTLGKLYIDANLTDKVTIAKIDATANDFSQ-E--IEGFPTIMLFK 447
                    689*****************88899**************************977.4..369****9987 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.15   2.6e+02      65      89 ..      80     112 ..      40     130 .. 0.68
   2 ?   -1.4   0.0       1.8   3.2e+03      67      89 ..     190     211 ..     141     231 .. 0.61
   3 !   18.4   0.1   1.2e-06    0.0022       4     105 ..     382     466 ..     379     470 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.15
  Thioredoxin_2  65 d........ieenvelarkygvrgtPtivfldg 89 
                    +         + ++el ++y+v+  Pt+ ++ g
     KHJ31520.1  80 KkirlvkidCTVEEELCKEYRVEDYPTLKIFRG 112
                    144444444566778************987765 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.8
  Thioredoxin_2  67 eenvelarkygvrgtPtivfldg 89 
                       +ela+k gv+ +P+iv++  
     KHJ31520.1 190 IHDSELAKKEGVT-FPAIVLFKS 211
                    4556788887765.688886654 PP

  == domain 3  score: 18.4 bits;  conditional E-value: 1.2e-06
  Thioredoxin_2   4 ngkpvlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtiv.fldgk.eivarlp 97 
                    ++k vl+ f++p+C+yCk+l  +  +l   + +     ++++  +  v i + +  +         ++++++  ++g+Pti  f  g+ +  +++ 
     KHJ31520.1 382 DNKDVLIEFYAPWCGYCKALTPKYNTL--GKLY-----IDAN-LTDKVTIAKIDATA---------NDFSQE--IEGFPTIMlFKAGDkKNPLVYD 458
                    6899******************99999..7777.....7777.34444444444444.........678888..99****7746666676667777 PP

  Thioredoxin_2  98 Gyvpaeel 105
                    G  + eel
     KHJ31520.1 459 GDRDVEEL 466
                    76666666 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.1   0.00068       1.2       8      92 ..      57     146 ..      52     149 .. 0.75
   2 ?    1.4   0.1      0.22     4e+02      15      55 ..     135     176 ..     127     208 .. 0.69
   3 !    9.1   0.0   0.00092       1.6       2      38 ..     384     423 ..     383     455 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00068
                    E--SSSHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SS-HHHHHHHGGGS........-TTSEE.EE-TT-HHHHTT-S--TT-SEEEEE-TT CS
  Thioredoxin_8   8 fgaswcppckaftpklkelyeklkkkkkveivyvsldkkeeefekylkkn........kkpwlsvpfddkkrnklkkkynvkaiPtlvvldkn 92 
                    f++  + +cka  p+  +  +kl  +kk+++v + +  +ee +++y+ ++        + + ++  +++ k  ++++++  +++P + vl+k+
     KHJ31520.1  57 FWK--SGHCKALAPEYEKAAQKLM-EKKIRLVKIDCTVEEELCKEYRVEDyptlkifrGINDVRPYTGNRKAPTIISHMIKQSLPAVSVLNKD 146
                    444..478***********99999.6*******************999886666665544555544555555566777777777777777765 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.22
                    HHHHHHHHHH.HHHHHHHHTTSEEEEEEE-SS-HHHHHHHGG CS
  Thioredoxin_8  15 pckaftpklk.elyeklkkkkkveivyvsldkkeeefekylk 55 
                    ++ + ++ l+ +  e++kk+++v++v+    ++e ++ +y++
     KHJ31520.1 135 QSLPAVSVLNkDTIEDFKKADQVVLVAYIDAEDETSNSEYTA 176
                    444444444424677777888888887666677777777665 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.00092
                    SEEEEEE--SSSHHHHHHHHHHHHHHHHHHH...TTSEEE CS
  Thioredoxin_8   2 kvvlLyfgaswcppckaftpklkelyeklkk...kkkvei 38 
                    k vl+ f+a wc  cka tpk + l + + +    +kv i
     KHJ31520.1 384 KDVLIEFYAPWCGYCKALTPKYNTLGKLYIDanlTDKVTI 423
                    558999***************9986555543333555555 PP

>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.1     0.016        28      31      75 ..      56      97 ..      45     109 .. 0.85
   2 ?    1.5   0.0      0.15   2.7e+02      65     112 ..     140     184 ..     133     208 .. 0.56
   3 !   10.2   0.0    0.0003      0.53      17      59 ..     377     416 ..     366     463 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.016
                EEESTST-CCHHHHHHHHHHCHHHCCCTTEEEEEEESSSCHHHHH CS
    AhpC-TSA 31 ffypkdwcpvCttelpalaklyeefkergvevigvsvdspeshkk 75
                +f+++    +C++ +p+++k+++++ e+++ ++ + ++ +e++ k
  KHJ31520.1 56 NFWKS---GHCKALAPEYEKAAQKLMEKKIRLVKIDCTVEEELCK 97
                56666...89*************************9999887655 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.15
                 EESSSCHHHHHHHHH-H.SSEEEE-.TTSHHHHHTT-EETTTTECSCEE CS
    AhpC-TSA  65 vsvdspeshkkfiekeslnfpllsD.eegkvakaygvlkeekglalrat 112
                 vsv +++++++f++++++ +    D e+++   +y ++ e     lr t
  KHJ31520.1 140 VSVLNKDTIEDFKKADQVVLVAYIDaEDETSNSEYTAIAE----KLRET 184
                 4555555555555555555555555222222334444433....23333 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.0003
                 EEECHHHTTSEEEEEEESTST-CCHHHHHHHHHHCHHHCCCTT CS
    AhpC-TSA  17 tvslsdykgkpvvlffypkdwcpvCttelpalaklyeefkerg 59 
                 ++ ++d k+  v++ fy+  wc +C++  p+++ l + + +++
  KHJ31520.1 377 EIVMDDNKD--VLIEFYAP-WCGYCKALTPKYNTLGKLYIDAN 416
                 555555555..********.***********999988776665 PP

>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       1.2   2.2e+03      35      66 ..      57      85 ..      52      98 .. 0.77
   2 ?   -1.6   0.0       1.1     2e+03      56     102 ..     150     200 ..     141     225 .. 0.58
   3 ?   -1.7   0.0       1.2   2.2e+03      58      83 ..     251     283 ..     245     320 .. 0.59
   4 !   15.8   0.0   4.9e-06    0.0088      28      97 ..     383     463 ..     360     472 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.2
                EESTTT-HHHHHTHHHHHTHHHHHHCSTTTEE CS
     Redoxin 35 fvpgafcPtCsaehpyleklaellkekgvdvv 66
                f+ +   + C+a +p+ ek a++l+ek +  v
  KHJ31520.1 57 FWKS---GHCKALAPEYEKAAQKLMEKKIRLV 85
                5555...8899999977777777799887665 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.1
                 HHHHCSTTTEEEEEESSSHH....HHHHHHHTT-TSEEEE-TTSHHHHHTT CS
     Redoxin  56 ellkekgvdvvavvadndaf....vkefwgkeglkfpvlsDgsaaftkalG 102
                 +++k+  v  va + ++d+      ++ ++k+  ++++ + ++++++k+ G
  KHJ31520.1 150 DFKKADQVVLVAYIDAEDETsnseYTAIAEKLRETYLFGVIHDSELAKKEG 200
                 555555555555555555555443344444444455554445555555555 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1.2
                 HHCSTTTEEEEEESSSHHHHHHHHH.......T CS
     Redoxin  58 lkekgvdvvavvadndafvkefwgk.......e 83 
                 ++++gv + ++ a++++++k+  +         
  KHJ31520.1 251 YMSSGVPIAYIFAQTEELQKSLSDTlrpvaekF 283
                 467777777777777777665444444444332 PP

  == domain 4  score: 15.8 bits;  conditional E-value: 4.9e-06
                 TSEEEEEEESTTT-HHHHHTHHHHHTHHHHHHCSTTTEEEEEESSSHHHHHHHHH............TT-TSEEEE-TTSHH CS
     Redoxin  28 gkkvvvnfvpgafcPtCsaehpyleklaellkekgvdvvavvadndafvkefwgk............eglkfpvlsDgsaaf 97 
                 +k v++ f++  +c++C+a +p+ ++l +l+ + + +  + +a+ da +++f  +             ++k+p+++Dg+ ++
  KHJ31520.1 383 NKDVLIEFYAP-WCGYCKALTPKYNTLGKLYIDANLTDKVTIAKIDATANDFSQEiegfptimlfkaGDKKNPLVYDGDRDV 463
                 799********.***************************************9999988888888888666888888888765 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.2    0.0004      0.71       5      25 ..     208     231 ..     205     233 .. 0.92
   2 ?   -3.2   0.0       6.4   1.2e+04      12      23 ..     328     339 ..     327     345 .. 0.71
   3 ?   -4.3   0.5        10   1.8e+04       7      14 ..     502     509 ..     500     509 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0004
   EF-hand_6   5 aFklfDkd...gdGkidaeElrka 25 
                 +Fk fD     ++Gkid +E++k+
  KHJ31520.1 208 LFKSFDEGkviHNGKIDGDEIKKF 231
                 7********************997 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 6.4
   EF-hand_6  12 dgdGkidaeElr 23 
                 d d +i+ae + 
  KHJ31520.1 328 DQDKEITAEAIE 339
                 788899987665 PP

  == domain 3  score: -4.3 bits;  conditional E-value: 10
   EF-hand_6   7 klfDkdgd 14 
                 k++D d+d
  KHJ31520.1 502 KIHDEDDD 509
                 67899987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       984  (0.0548832); expected 358.6 (0.02)
Passed bias filter:                      645  (0.0359752); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.47
# Mc/sec: 3327.78
//
Query:       KHJ31521.1  [L=610]
Description: putative vacuolar fusion protein mon-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.6e-149  497.7   0.3   3.1e-149  497.5   0.3    1.1  1  Mon1            Trafficking protein Mon1
  ------ inclusion threshold ------
        0.1   11.4   0.0       0.15   10.8   0.0    1.2  1  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Mon1  Trafficking protein Mon1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  497.5   0.3  3.5e-153  3.1e-149       1     404 []     184     609 ..     184     609 .. 0.98

  Alignments for each domain:
  == domain 1  score: 497.5 bits;  conditional E-value: 3.5e-153
                 HHHH-SEEEEEEETTS-EEEESSS-HHHHHHHHHHHHHHHHHHH.HTT--EEEEEETTEEEEEEEETTEEEEEEE-SS--HHHHHHHHHHHHHHHHHHH CS
        Mon1   1 ewkkkkkhffilSsAGKPIYsrygseeklsslmGviqaivsffeenekdelksitagdtkfvflnkspliLvaiskteesesqlrkqLellysqllsiL 99 
                 +wk+k kh++ilSsAGKPIYsr+g+++ ++s++Gviq+i+sf++ +++d+l  +++++t+fv+ + +pl+Lvais+++es+s+lr+qLe+ly+q+ls+L
  KHJ31521.1 184 QWKTKYKHYLILSSAGKPIYSRHGDQNLINSYIGVIQTIISFYK-SSNDSLFGFSVDETRFVISTYGPLYLVAISRLGESDSHLRAQLEALYMQILSTL 281
                 69******************************************.79**************************************************** PP

                 HHHHHHHHHHH-TT--TTTTTTT-HHHHHHHHHHHHHH-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        Mon1 100 tksqleklfekrenfDLrrlLegtdelldslidkslelspslllsaleclklrkslRekinnillkakkkkllfgllvaenklvsvlrpkkhtlhpsDl 198
                 t ++l + f++r+n+DLrr Legt+ ll+sl+d++++ sps lls+lecl l+k +R+ in  llk++++kll+gl+va++klvsv+rpk+h+lhpsDl
  KHJ31521.1 282 TLPTLLQFFTNRPNIDLRRPLEGTEGLLSSLADTFTKGSPSALLSSLECLILQKPHRQLINISLLKTRSEKLLYGLIVAGGKLVSVIRPKRHSLHPSDL 380
                 *************************************************************************************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        Mon1 199 qlLfnlisssesfkaedeesWiPiCLpkFnsngflyayvkfl..................eeekialvliSadkdaFfelkelkekiiekleksellke 279
                 ql+fn++++++ ++a ++e+WiPiCLp Fn++g+ly+yv+fl                  ++e+ia ++iSa+k++Ff++k+++++ +++le+++ l+ 
  KHJ31521.1 381 QLIFNMLFEADGVRAGGGENWIPICLPGFNNRGYLYMYVSFLgasekqnkqsthdtearfPNEQIAFIFISAEKESFFDIKQMRDDTVDELEQNGSLEL 479
                 ************************************************************99************************************* PP

                 XXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        Mon1 280 lkealsskklsvsdipi.pllrHFiykskknvQfvmseleapys.eeerkrllklYqklhasvhek...lkllyeesekltllawvtssfelYlvfnpl 373
                 +k+a+ ++++s+ +i   ++l+HF+yks++nvQf+ms+++++++    r+rl++lY++lhas+h+k   lk+l++ s++ t+law+t+ fe+Y+v++++
  KHJ31521.1 480 IKKAVCKGRPSILEISPgTQLSHFLYKSRSNVQFTMSDFTSNFNdLIARRRLMTLYHSLHASIHSKhshLKILQCVSHETTSLAWCTPVFEFYCVAGSN 578
                 **********99999877*********************999666999****************998766***************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        Mon1 374 vskkaliksankilkwikkeeerlFisegav 404
                 +s+++l+k+anki++w+k+eeerlFi++gav
  KHJ31521.1 579 LSREKLTKEANKIIQWVKSEEERLFIIGGAV 609
                 ***************************9985 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   1.7e-05      0.15     281     323 ..      95     226 ..      27     230 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 1.7e-05
  Pkinase_fungal 281 r.........................................................................................lenrv 286
                     +                                                                                         ++++ 
      KHJ31521.1  95 HkftnegddgfsltsqpssfrpdgdlmsllderlkhqspewtllgtqrsnvhpfetvevlnsslqnfdkefdeidtiniekgneeevilqWKTKY 189
                     33444444444444444445555555555555555555555555555555555555566666666666666777788888888888999999*** PP

  Pkinase_fungal 287 hrrlvispvGkpiekaespkellealrDaIkghrsLf 323
                      + l++s++Gkpi+  +  ++l+++ + +I++  s +
      KHJ31521.1 190 KHYLILSSAGKPIYSRHGDQNLINSYIGVIQTIISFY 226
                     ******************************9987777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (610 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4229.39
//
Query:       KHJ31522.1  [L=280]
Description: putative rna methylase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-46  157.2   0.1    4.1e-46  156.6   0.1    1.3  1  Methyltransf_15  RNA cap guanine-N2 methyltransferase
    4.9e-06   26.0   0.0    6.9e-06   25.5   0.0    1.2  1  N6_Mtase         N-6 DNA Methylase
     0.0034   17.1   0.0     0.0065   16.2   0.0    1.5  1  UPF0020          Putative RNA methylase family UPF0020
     0.0084   15.8   0.0      0.017   14.8   0.0    1.5  1  Cons_hypoth95    Conserved hypothetical protein 95
  ------ inclusion threshold ------
      0.034   13.9   0.0      0.045   13.5   0.0    1.3  1  Met_10           Met-10+ like-protein


Domain annotation for each model (and alignments):
>> Methyltransf_15  RNA cap guanine-N2 methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.6   0.1   1.1e-49   4.1e-46       2     163 ..     109     272 ..     108     274 .. 0.93

  Alignments for each domain:
  == domain 1  score: 156.6 bits;  conditional E-value: 1.1e-49
  Methyltransf_15   2 rvilDlfsGaGGnviqfalv........fekviaieinleklacaqhNaevYgvsdkitlvlgdvfellaklkleki.kvdlvflSpPwGGpsY 86 
                      +v++D+fsGaGGnvi+fa++        ++++iaie++++ laca+hNa +Y+v++ki ++ gd fe l++  ++   k  ++f+SpPwGGpsY
       KHJ31522.1 109 KVLIDMFSGAGGNVIAFARMnqedgqhsWDQIIAIEKDISVLACAYHNATIYNVQKKISWIRGDSFEYLKSHASTINpKQTIIFASPPWGGPSY 202
                      689***************999999999****************************************99986665556999************* PP

  Methyltransf_15  87 kkqekfdlkkklkplkleqllkeslklskniilfLPrnsdlnqlaaltaevlekaakvkvveikenglvkallaylg 163
                      ++q +fdl + ++p++l++++++   +   ++l+LPr sdl+q+a l    + k +k++vv+++  g +kal+ay++
       KHJ31522.1 203 RNQSVFDL-NTMQPYSLNHIYESCKDM--DMALYLPRTSDLRQIALL----APKGKKIEVVQYCMMGVSKALVAYIP 272
                      ********.************987655..689************987....788999******************98 PP

>> N6_Mtase  N-6 DNA Methylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0   1.9e-09   6.9e-06      30     146 ..      88     208 ..      85     250 .. 0.86

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 1.9e-09
    N6_Mtase  30 TPrevsklivell...epksgesvyDpacGsggllvqaekvlkeedgktkelsiyGqeknettyrLakmNlllhgieykkvkirlgdtlekpkfe...k 122
                 TP+ + k +++ l    ++++++ +D+ +G+gg  +  ++ +++edg+++  +i   ek+ +  + a  N  + ++++k ++   gd++e  k++    
  KHJ31522.1  88 TPEPIAKQVAKDLakfCNSEKKVLIDMFSGAGGNVIAFAR-MNQEDGQHSWDQIIAIEKDISVLACAYHNATIYNVQKK-ISWIRGDSFEYLKSHastI 184
                 888888887777766644555689************9999.6889********************************99.9999999998877666667 PP

    N6_Mtase 123 dkkfdvvvaNppfnqkewkektle 146
                 + k  ++ a pp++   ++++++ 
  KHJ31522.1 185 NPKQTIIFASPPWGGPSYRNQSVF 208
                 88999**********999888765 PP

>> UPF0020  Putative RNA methylase family UPF0020
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.8e-06    0.0065      65     141 ..     126     207 ..      88     257 .. 0.71

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.8e-06
                 HHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--G.GG--....STTS---EEEE----------HHHH CS
     UPF0020  65 lkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqada.akLr....lkegevdvivtnpPYGerlgskkal 141
                 ++ + e  ++   +++++++d +v+++a  Na  ++v+++i++   d    L+      + +  +i + pP+G    +++++
  KHJ31522.1 126 ARMNQEDGQHSWDQIIAIEKDISVLACAYHNATIYNVQKKISWIRGDSfEYLKshasTINPKQTIIFASPPWGGPSYRNQSV 207
                 44444555556677******************************9996155666554334467788899***9755555444 PP

>> Cons_hypoth95  Conserved hypothetical protein 95
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   4.6e-06     0.017      41     126 ..     107     200 ..      91     219 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 4.6e-06
                    CC-EEEETT-TTSHHHHHHHHT........T-SEEEEEES-HHHHHHHHHHHCCCT--TTTEEEEES-HHHHCTS--S.S-EEEEEEE--SSSTT CS
  Cons_hypoth95  41 egarvLDlfaGsGalglEAlSR........gakkavlvekdkeavkilkenleelkleeetaelkedaleallklakk.keefdivflDPPyake 126
                    e++ ++D+f+G G+  + A  R          ++++++ekd ++++   +n    +++++++ ++ d++e l+++a++ +++  i+f  PP+   
     KHJ31522.1 107 EKKVLIDMFSGAGGNVI-AFARmnqedgqhSWDQIIAIEKDISVLACAYHNATIYNVQKKISWIRGDSFEYLKSHASTiNPKQTIIFASPPWGGP 200
                    56778999*99999877.77772222221134689*************************************999876467889*******9765 PP

>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.3e-05     0.045      98     169 ..     105     182 ..      94     274 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.3e-05
                 --TT-EEEETT-TTTCCHHHCCHHTTS......SEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-E CS
      Met_10  98 veegevVvdvfAGiGpfaipiakyska......krvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqla 169
                  +e +v +d+f G G   i+ a++ ++       +++ai+++ +      +n +  +v+k+++ i +D+ e++++++ 
  KHJ31522.1 105 NSEKKVLIDMFSGAGGNVIAFARMNQEdgqhswDQIIAIEKDISVLACAYHNATIYNVQKKISWIRGDSFEYLKSHAS 182
                 4577899**************99765422222247**********************************999876554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2147.09
//
Query:       KHJ31523.1  [L=186]
Description: putative ccaat-binding factor complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.3e-28   96.7   2.0    1.2e-27   96.0   2.0    1.3  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
    2.4e-06   27.9   0.1    4.4e-06   27.1   0.1    1.4  1  Histone        Core histone H2A/H2B/H3/H4
    0.00043   20.2   0.1    0.00084   19.3   0.1    1.4  1  Bromo_TP       Bromodomain associated
     0.0027   17.7   0.0     0.0042   17.1   0.0    1.3  1  TFIID-18kDa    Transcription initiation factor IID, 18kD subu
     0.0085   16.2   0.0      0.013   15.6   0.0    1.3  1  CENP-T_C       Centromere kinetochore component CENP-T histon
  ------ inclusion threshold ------
      0.037   13.9   0.1      0.071   12.9   0.1    1.5  1  PAN_3          PAN-like domain
       0.05   13.2   0.1      0.082   12.5   0.1    1.3  1  ARPC4          ARP2/3 complex 20 kDa subunit (ARPC4)
       0.12   12.9   0.1       0.37   11.3   0.1    1.8  1  TFIID_20kDa    Transcription initiation factor TFIID subunit 


Domain annotation for each model (and alignments):
>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.0   2.0   5.2e-31   1.2e-27       2      65 .]      45     109 ..      44     109 .. 0.98

  Alignments for each domain:
  == domain 1  score: 96.0 bits;  conditional E-value: 5.2e-31
                    XXXHHHHHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF   2 eLPiarvkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65 
                    +LPia+v++Imk + p+++kiak+Ake+++ecv+efi +++seA+e+c+ ekrKt+++e+i+ A+
     KHJ31523.1  45 WLPIANVARIMKIAlPENAKIAKEAKECMQECVSEFIAFITSEASEKCQIEKRKTVNGEDILFAM 109
                    8*************************************************************997 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.1     2e-09   4.4e-06      28     128 ..      12     109 ..       2     111 .. 0.82

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 2e-09
                 TS-SSSSB--TTT-XTTHHHHHHHHHHHHXXSXXSXHHHHHHHHH.HHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHH CS
     Histone  28 kasskskkkkkrryrpgtvalkeirkyqkstdlliqklpfaRvvr.eivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiq 125
                 + ++++   ++ +++++++    ++   k+ d+  + + +aR+++  +     e+ +i +ea +++qe +  +++ +++eA+  +   KR+T++ +Di 
  KHJ31523.1  12 QPAESPPDDSDAQMNQDQQSSNPQELDVKEQDRWLPIANVARIMKiALP----ENAKIAKEAKECMQECVSEFIAFITSEASEKCQIEKRKTVNGEDIL 106
                 4566666677777777888888888888888888899999998884444....6********************************************* PP

                 HHH CS
     Histone 126 lAr 128
                 +A+
  KHJ31523.1 107 FAM 109
                 998 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.1   3.8e-07   0.00084      26      75 ..      67     116 ..      63     118 .. 0.92

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 3.8e-07
                 HHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-SS--HHHHHHHHHHTT--G CS
    Bromo_TP  26 esaLEtLteiaqkYirelgeqaksfaehagRseptlkDvvltLqelginv 75 
                 ++a E ++e + ++i+ ++ +a++++ ++ R +++ +D+ +++  lg+++
  KHJ31523.1  67 KEAKECMQECVSEFIAFITSEASEKCQIEKRKTVNGEDILFAMTSLGFEN 116
                 56679999***************************************965 PP

>> TFIID-18kDa  Transcription initiation factor IID, 18kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   1.9e-06    0.0042      17      64 ..      62     109 ..      50     127 .. 0.90

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.9e-06
                  -SS--HHHHHHHHHHHHHHHHHHHHHHHC-XXXX...XXXXXXXXXXX CS
  TFIID-18kDa  17 vkePlqetvqlledlvrgyliellqqaakvaklrgsrkitlEDllfli 64 
                    +  +e+ +++++ v++++  ++ +a +  + ++++ ++ ED+lf++
   KHJ31523.1  62 NAKIAKEAKECMQECVSEFIAFITSEASEKCQIEKRKTVNGEDILFAM 109
                  555678999*************************************98 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   5.7e-06     0.013       7      78 ..      45     113 ..      39     132 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 5.7e-06
    CENP-T_C   7 slPaavvkklakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkrqr 78 
                  lP a v ++ k +     ++ak+ kea + ++++  +f+  ++++     +  +RKt++ +D++  m + +
  KHJ31523.1  45 WLPIANVARIMKIAL---PENAKIAKEAKECMQECVSEFIAFITSEASEKCQIEKRKTVNGEDILFAMTSLG 113
                 488888888877764...4699*******************************************9998755 PP

>> PAN_3  PAN-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   3.2e-05     0.071      13      47 ..      60      94 ..      52     102 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.2e-05
       PAN_3 13 stssttseswddCvqkCledstCilayknsenCtl 47
                +++ ++ ++ ++C+q+C ++   ++ ++ se+C++
  KHJ31523.1 60 PENAKIAKEAKECMQECVSEFIAFITSEASEKCQI 94
                5667788899***********************96 PP

>> ARPC4  ARP2/3 complex 20 kDa subunit (ARPC4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   3.6e-05     0.082      78     127 ..      68     118 ..      62     131 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.6e-05
                 --SSHHHHHHHHHHHHHGGGT.TTSTTB-SS--TT-SEEEEEETTHHHHS- CS
       ARPC4  78 qadelerillkkftrflmkra.eafeilRrkpvegydiSfLitnehveklg 127
                 +a+e  +  +++f++f++++a e+ +i +rk v+g di f +t+  +e++ 
  KHJ31523.1  68 EAKECMQECVSEFIAFITSEAsEKCQIEKRKTVNGEDILFAMTSLGFENYA 118
                 56677788899******9886266*******************99999985 PP

>> TFIID_20kDa  Transcription initiation factor TFIID subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00016      0.37      14      62 ..      61     109 ..      52     111 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00016
                  SS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEE-HHHHHHHH CS
  TFIID_20kDa  14 setkldedvedlLleiaddFvesvtkfacklakhRksdklevrDiqlhl 62 
                   ++k+ ++ ++ + e + +F+  +t+ a++  +  k ++++  Di + +
   KHJ31523.1  61 ENAKIAKEAKECMQECVSEFIAFITSEASEKCQIEKRKTVNGEDILFAM 109
                  578999***********************9999999999******9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       967  (0.053935); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1361.73
//
Query:       KHJ31524.1  [L=443]
Description: putative apurinic endonuclease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-36  126.1   0.0    1.6e-36  125.7   0.0    1.1  1  AP_endonuc_2  Xylose isomerase-like TIM barrel


Domain annotation for each model (and alignments):
>> AP_endonuc_2  Xylose isomerase-like TIM barrel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.7   0.0   8.9e-41   1.6e-36       3     209 ..      99     317 ..      97     318 .. 0.93

  Alignments for each domain:
  == domain 1  score: 125.7 bits;  conditional E-value: 8.9e-41
                   HHHHCT-SEEEEECCTCSHHHHC..HHHHHHHHHHHHHHTTSEEEEEEECCCHSTCTHCHTTCS.HHHHHHHHHHHHHHHHHHTBSEEEEEBCCGBC CS
  AP_endonuc_2   3 aaaeaGfdgvElfgrdlvpvsel..sdeelrelrkaldelglriaslslftrfgypdederear.reesvdalkraielaaaLGapllvlhpGtaga 96 
                    a ++G +++ lf+r+++++++    ++ ++e++k + ++++    + l+ +++ ++  + e++  e++ +++ + +++++aLG++l ++hpG   +
    KHJ31524.1  99 NALHIGCNAFALFLRSQRKWVSPplAPQSCEEFKKFCLQHNYDTQKHVLPHGSYLVNLAQAEHEkAEQAYNCFVDDLRRCEALGIKLYNFHPG---S 192
                   57799**************************************888888888888888755555789**************************...* PP

                   TTTSGHHHHHHHHHHHHHHHHHHHHHHTSEEEEE--TTTTSSSTC..HHHHHHHHHHTTTT.EEEEEEHHHHHHH......TTTHHHHHHHHHGG.. CS
  AP_endonuc_2  97 gpkgseeeawerlaeslneladyaekegvklalEtlagsgvelgd..eelarlldavdspn.vgvclDtgHllia......eedvddalraladr.. 182
                    +k+++ee ++r+a+ ln++ +   ++ v  +lE++ag+g+  g   e+l+++++ vd++  vgvclDt+H+++a       e + ++++ + +   
    KHJ31524.1 193 SGKNPREESIKRIAAQLNKAHKA--TKTVVTVLENMAGAGNVIGSkwEDLRDIIELVDDKSrVGVCLDTCHAFAAghdirsPEAFKKTMDSFSEIvg 287
                   ***********************..89**************9999*********************************9998888888888887799 PP

                   ...EEEEEE.EESSTTTTSSTTEESTTSSS CS
  AP_endonuc_2 183 ...ikhvHikDakgdlgagrdrhvpigeGe 209
                      +k++H++D+k + +++rd+h++ig+G 
    KHJ31524.1 288 msyLKALHLNDSKAPFASNRDVHANIGTGF 317
                   999*************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (443 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1544  (0.0861175); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3106.61
//
Query:       KHJ31525.1  [L=1005]
Description: hypothetical protein EV44_g5284 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1005 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       611  (0.0340789); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.26s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 7042.16
//
Query:       KHJ31526.1  [L=1870]
Description: putative cellular morphogenesis regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   7.5e-118  393.1   0.5   7.4e-116  386.5   0.0    3.0  3  Dopey_N   Dopey, N-terminal


Domain annotation for each model (and alignments):
>> Dopey_N  Dopey, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  386.5   0.0  4.1e-120  7.4e-116       1     306 [.      36     365 ..      36     366 .. 0.95
   2 !    3.3   0.2     0.002        36     161     265 ..    1018    1132 ..    1011    1160 .. 0.61
   3 ?   -3.5   0.0      0.24   4.3e+03      66     106 ..    1527    1582 ..    1507    1592 .. 0.70

  Alignments for each domain:
  == domain 1  score: 386.5 bits;  conditional E-value: 4.1e-120
     Dopey_N   1 dkkykkykkevekaLksfe.kveeWaDlisfLgkLlkaLqssnskfevipekllvakrLaqCLnpalPsgVHqkaLevYelifenigseslskdlslyl 98 
                 dk++++y+++v+++L+ fe +++eWaD+isfL+kLlk Lq+++++ + ip+k++vakrLaqCLnp+lPsgVHqk+LevY++if++ig+++ls+dl++yl
  KHJ31526.1  36 DKAFRRYASSVDRSLSLFEsALQEWADYISFLSKLLKSLQARPPHSNEIPHKVTVAKRLAQCLNPSLPSGVHQKVLEVYRFIFSIIGKDKLSRDLYIYL 134
                 6789***************99*******************99********************************************************* PP

     Dopey_N  99 pGLlpllsyaslsvkpqlleliekyllpLg.ekLrpalkglilslLpGLeeensevfertlklleklkekvge..............kyfyqclwlaii 182
                 pGL+++ls+aslsv+  ++elie+++l+++ ++Lrpa+k+lil+lLpGLe+e+se fertl+l++++k+ +++               +f+qc++la i
  KHJ31526.1 135 PGLVSTLSFASLSVRALFIELIEDFFLKVDpQSLRPAIKALILALLPGLEDETSEDFERTLHLIDNFKNVIRPansedlmnghssgdGFFWQCFFLASI 233
                 *************************************************************************************************** PP

     Dopey_N 183 rspsrRlgalkylskklpklkeveeeeekke........kls..klseeaeallspepgllvrallatledenllvqRgiLDlLlshlpldsdvlqekl 271
                 +s++rR gal+yl ++lpkl ++    +  +        + +  ++++ +e l+spepgll+r+++a+l+de+ll+qRg+LDlL++hlpl+s+vlq+k+
  KHJ31526.1 234 TSSNRRGGALAYLIRNLPKLGQSLPPISP-SlgtttlniE-QgaSSHRFSEILTSPEPGLLLRCFAAGLNDEQLLTQRGFLDLLVTHLPLHSTVLQKKV 330
                 ********************876543332.3577777653.14466677788889******************************************** PP

     Dopey_N 272 skedkellveaalklllrkDmSlnRRlwaWLlgpe 306
                 ++ed+ellv+aa+ ++ r+DmSlnRRlw+W+lgp+
  KHJ31526.1 331 KSEDLELLVTAAAGVVSRRDMSLNRRLWTWFLGPS 365
                 *********************************96 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.002
     Dopey_N  161 leklkekvge......kyfyqclwlai..irspsrR..lgalkylskklpklkeveeeeekkeklsklseeaeallspepgllvrallatlede.nl 246 
                  +e+l+++++e       ++  +++ ++  +++p++   l+ +  +++++ +++++++ +++ + +s++++++e+  ++ p +l++++ a+l+   + 
  KHJ31526.1 1018 MERLMQSLDEpdpfvqVLLLDVVFATLklLNKPRHEppLSSMLSIKRSFTSVQKTSS-NSQPSIISENTDSIESSHPNLPPILIKCIQAGLSAAsSR 1113
                  566666666666666544444555444113333333114445555666655554443.333345558888999999999999******999976344 PP

     Dopey_N  247 lvqRgiLDlLlshlpldsd 265 
                   v  + + +L++ l++ ++
  KHJ31526.1 1114 PVLDSWISFLTECLQFYNE 1132
                  5666667777777776543 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 0.24
     Dopey_N   66 lPsgVHqkaLevYelifenigses...............lskdlslylpGLlplls 106 
                  +P+ V +++Le  ++i +  ++++               +++ + l  +G lpll+
  KHJ31526.1 1527 FPECVTKNTLELLNHIAKLPQNQRlwkkdlgeafndhkfFTSPITLVDSGWLPLLK 1582
                  48888888999999988888777755555555555555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1870 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.89u 0.31s 00:00:01.20 Elapsed: 00:00:00.45
# Mc/sec: 12366.83
//
Query:       KHJ31527.1  [L=116]
Description: putative prefoldin subunit 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.4e-22   78.9   6.8    2.9e-22   78.6   6.8    1.1  1  Prefoldin_2   Prefoldin subunit
     0.0059   16.5   3.6     0.0069   16.3   3.6    1.1  1  Phage_Mu_Gam  Bacteriophage Mu Gam like protein
  ------ inclusion threshold ------
      0.011   15.7   5.8       0.77    9.7   0.1    2.1  2  Prefoldin     Prefoldin subunit
      0.032   13.9   1.5       0.35   10.5   1.5    2.0  1  HBB           Helical and beta-bridge domain
      0.038   14.5   2.7        2.3    8.8   0.1    2.1  2  Cep57_MT_bd   Centrosome microtubule-binding domain of Cep57


Domain annotation for each model (and alignments):
>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.6   6.8   8.1e-26   2.9e-22       1     106 []      11     116 .]      11     116 .] 0.99

  Alignments for each domain:
  == domain 1  score: 78.6 bits;  conditional E-value: 8.1e-26
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-TT--EEEEETTEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2   1 qelinkfqqlqqqlqqlaqqikqletqlkelelvleelelldedtkvyklvGdvlvkqdkeevkeeLeerketlekeiktlekqleklekeleelkee 98 
                  qel+ +++ ++  l+q+a +i ++e++l+e+ lvle l++l+  +k+++++ +vlv++++++v++ L+++ e l+k+++ l kq  +++ e++++k++
   KHJ31527.1  11 QELQSQYTVYKTNLEQIARKIGDVEQELEEHCLVLESLKNLPAHRKCFRMINGVLVERTLQDVIPALKTNSEGLKKVLNDLVKQFNNKQIEMNDWKKK 108
                  899*********************************************************************************************** PP

                  HHCCTS-- CS
  Prefoldin_2  99 lqkklqqq 106
                  +++++ qq
   KHJ31527.1 109 NNIQVVQQ 116
                  ***99876 PP

>> Phage_Mu_Gam  Bacteriophage Mu Gam like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   3.6   1.9e-06    0.0069      19     109 ..       3      95 ..       1     115 [. 0.82

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.9e-06
                   HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCTHHHH-..----.-EE-SS-EE---------.--TT--...HHHHHHHHHCT- CS
  Phage_Mu_Gam  19 eeieaeaneeiaaikekleaeleplkkeieylesllkqYaeankdeLfkdgktK.slklpfGkvgfrkstpkvkkrdkek...eelLealkelgf 109
                   +ei ++ n+e +     ++++le+++ +i + e++l++ +  ++ +L++ + ++    +++G +  r+ ++++ + +++    +++L+ l  ++f
    KHJ31527.1   3 QEITQKQNQELQSQYTVYKTNLEQIARKIGDVEQELEEHCLVLE-SLKNLPAHRkCFRMINGVLVERTLQDVIPALKTNSeglKKVLNDLV-KQF 95 
                   79999999*****9***************************999.8888776655****************99888877777877777663.233 PP

>> Prefoldin  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.0   0.00081       2.9      80     116 ..       4      40 ..       2      42 .. 0.92
   2 ?    9.7   0.1   0.00022      0.77      68     109 ..      63     104 ..      58     116 .] 0.85

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00081
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  80 ellkkkleelekqlekleeeleklkdqittleanlaq 116
                 e+ +k+ +el++q ++++ +le+++++i  +e++l++
  KHJ31527.1   4 EITQKQNQELQSQYTVYKTNLEQIARKIGDVEQELEE 40 
                 788999**************************99976 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00022
                 TEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  68 gyyveksleeAiellkkkleelekqlekleeeleklkdqitt 109
                 g+ ve++l++ i  lk + e l+k l +l ++ + ++ +++ 
  KHJ31527.1  63 GVLVERTLQDVIPALKTNSEGLKKVLNDLVKQFNNKQIEMND 104
                 899***********************9999999988877765 PP

>> HBB  Helical and beta-bridge domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.5   9.6e-05      0.35      25      72 ..      32      94 ..       1     109 [. 0.64

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 9.6e-05
                HHHCCCCHHHHSTTTE...............CCHCHHHHHCHCHHHCHHHHHHHHHHHHHHHH CS
         HBB 25 reaeeereeeyvleee...............pilpdeileeavpglirsaehflsllkrlvey 72
                 ++e+e ee +++ e+                +l +  l+ ++p+l++++e+++++l++lv+ 
  KHJ31527.1 32 GDVEQELEEHCLVLESlknlpahrkcfrminGVLVERTLQDVIPALKTNSEGLKKVLNDLVKQ 94
                44444444444444444444444444444446899999**********************975 PP

>> Cep57_MT_bd  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.6    0.0054        19      28      66 ..       7      47 ..       4      50 .. 0.79
   2 ?    8.8   0.1   0.00063       2.3      11      50 ..      68     107 ..      64     115 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0054
  Cep57_MT_bd 28 klelqelaaqynaldpslgkrkRk..dLaeeleelvkrlEa 66
                 +++ qel++qy      l++  Rk  d+++elee    lE+
   KHJ31527.1  7 QKQNQELQSQYTVYKTNLEQIARKigDVEQELEEHCLVLES 47
                 678899*****999999988888744689999987777765 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00063
  Cep57_MT_bd  11 eaLaevlkeLedEfehlklelqelaaqynaldpslgkrkR 50 
                  ++L +v+ +L+   e lk+ l +l +q+n+ +  ++  k+
   KHJ31527.1  68 RTLQDVIPALKTNSEGLKKVLNDLVKQFNNKQIEMNDWKK 107
                  689**************************98877766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2039  (0.113726); expected 358.6 (0.02)
Passed bias filter:                      715  (0.0398795); expected 358.6 (0.02)
Passed Vit filter:                        83  (0.00462937); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 865.77
//
Query:       KHJ31528.1  [L=347]
Description: putative fk506-binding protein 2 precursor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-40  137.3   5.1      4e-40  137.3   5.1    1.6  2  STIMATE          STIMATE family
  ------ inclusion threshold ------
        1.3    8.8   6.2       0.36   10.7   0.7    2.3  2  Peptidase_M48_N  CAAX prenyl protease N-terminal, five membra
        2.2    7.8  10.1          2    8.0   2.2    2.3  2  Virul_fac_BrkB   Virulence factor BrkB


Domain annotation for each model (and alignments):
>> STIMATE  STIMATE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.4   8.2e+03      49      69 ..      94     114 ..      68     136 .. 0.64
   2 !  137.3   5.1   6.6e-44     4e-40       1     125 []     156     283 ..     156     283 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.4
     STIMATE  49 lsawlkqllvyllilvlmKlv 69 
                 +++wl +++  +l+ +l+ l+
  KHJ31528.1  94 VKIWLFDVSKQILGSILVHLA 114
                 555555555555544444444 PP

  == domain 2  score: 137.3 bits;  conditional E-value: 6.6e-44
     STIMATE   1 CswYflnlllDttlGvlilylllkllekllkklk....leslesGnYgkpkalsawlkqllvyllilvlmKlvvllllllfeevlakvaellLswlesn 95 
                 Cs+Y+lnl++Dtt+G++il++ll++++kll +++     es+esGnYg+p+++  w+kq+++y+l+l+ mK++vl+++l++++ l++v++++L+w+e+n
  KHJ31528.1 156 CSFYLLNLAIDTTIGIPILIFLLHIITKLLFHTGfgtpPESIESGNYGTPPSTYRWFKQTIIYFLGLLGMKICVLIIFLMLPW-LSRVGDWALKWTEGN 253
                 ********************************9999999**********96799****************************8.*************** PP

     STIMATE  96 pklqlllvmvivPlilNvlqfwiiDsilkk 125
                 + +q+++vm+i+Pli+N+ q++iiDs++k+
  KHJ31528.1 254 EIVQVMFVMLIFPLIMNATQYYIIDSFIKN 283
                 ****************************95 PP

>> Peptidase_M48_N  CAAX prenyl protease N-terminal, five membrane helices
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.5       0.1   6.2e+02     126     148 ..     161     183 ..     156     189 .. 0.80
   2 ?   10.7   0.7   6.1e-05      0.36      49      92 ..     227     270 ..     197     276 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.1
  Peptidase_M48_N 126 kslllalviglpllaallwiiew 148
                       +l++ ++ig+p+l+ ll ii++
       KHJ31528.1 161 LNLAIDTTIGIPILIFLLHIITK 183
                      56778889999999999999875 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 6.1e-05
  Peptidase_M48_N  49 llallllgllpflwklsgkllgldaeseilqslvfllllslist 92 
                       ++l+++ +lp+l ++   +l++++ +ei+q ++++l++ li+ 
       KHJ31528.1 227 ICVLIIFLMLPWLSRVGDWALKWTEGNEIVQVMFVMLIFPLIMN 270
                      23777777888888887777889999999999999999888765 PP

>> Virul_fac_BrkB  Virulence factor BrkB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   1.0     0.004        24      72     144 ..      58     129 ..      15     181 .. 0.76
   2 ?    8.0   2.2   0.00033         2     105     170 ..     208     269 ..     199     293 .. 0.65

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.004
  Virul_fac_BrkB  72 slgllglavllwsasggvsalrralnkiygveesrsflrkrllsllllllllvllllslvlsvflqslllasa 144
                        llg  ++++ +  g+ al + + k ++ +++r  ++ +l +++  +l+ +l+ l+ +++++l s +l ++
      KHJ31528.1  58 ECRLLGPFAIFVQGALGILALTALVFKRWRERPQR-PVKIWLFDVSKQILGSILVHLANLAMSLLSSGQLSIK 129
                     46778888888999999999999999999998865.8999999999999999999999999999999766554 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00033
  Virul_fac_BrkB 105 srsflrkrllsllllllllvllllslvlsvflqslllasapllglglelsellllqllrwlvalll 170
                     + +++++ ++++l ll++ + +l+ ++++ +l ++  + +++ + g+e+++++ + +l  +++l++
      KHJ31528.1 208 TYRWFKQTIIYFLGLLGMKICVLIIFLMLPWLSRVGDWALKWTE-GNEIVQVM-FVML--IFPLIM 269
                     45699**************9999999999999998887754444.33333332.2222..222333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2552.28
//
Query:       KHJ31529.1  [L=321]
Description: putative mitochondrial large ribosomal subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-29  102.8   0.1      2e-29  101.9   0.1    1.5  1  Ribosomal_L22   Ribosomal protein L22p/L17e
  ------ inclusion threshold ------
      0.056   13.3   0.1       0.12   12.3   0.1    1.5  1  Phage_tail_APC  Phage tail assembly chaperone protein


Domain annotation for each model (and alignments):
>> Ribosomal_L22  Ribosomal protein L22p/L17e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.9   0.1   2.2e-33     2e-29       2     103 .]     154     282 ..     153     282 .. 0.99

  Alignments for each domain:
  == domain 1  score: 101.9 bits;  conditional E-value: 2.2e-33
                    EEEEESS-HHHHHHHHHHHTTSBHHHHHHHHHT-SSTTHHHHHHHHHHHHHHHH..HT...........................-GGGEEEEEEE CS
  Ribosomal_L22   2 kgsnlrvsfkklrevarlIrgmkveeAlkyLkfskkkaakfvlklLknaeanaelkgl...........................dvdslvIeeiq 70 
                    k++++++s+kkl ++a++I+g++v++A+ +++fskkk+ak+v+++L++a+++a+++++                           d++++++++++
     KHJ31529.1 154 KSHDFKTSVKKLVHLANQIKGKTVDDAIIQMRFSKKKVAKDVKEHLEHAKNEAIVRRGmgmgilpgnefkpltittndkkrvrviDPTTIYVDQAW 249
                    799*****************************************************999************************************* PP

                    EEEEEEEEEEEEESTTEEEEEEEEEEEEEEEEE CS
  Ribosomal_L22  71 vnkgpklkrrtyrArGrinpirkspchievvlk 103
                    ++kg   + ++yrArGr+n++r++++++++vlk
     KHJ31529.1 250 CGKGLFDRTLDYRARGRVNIMRNPTTSMTIVLK 282
                    *******************************96 PP

>> Phage_tail_APC  Phage tail assembly chaperone protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   1.3e-05      0.12       1      28 [.     285     315 ..     285     319 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.3e-05
                     HHHHHHHHHHHHHHTH...HHHSTTS---HH CS
  Phage_tail_APC   1 aaevRaeRdrrLaasD...wvqlpDspldee 28 
                     a ++R +Rdr L+ +    wvqlp +p++++
      KHJ31529.1 285 ATRIRIQRDRELKSAKkktWVQLPNRPITAQ 315
                     579***********99999********9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       902  (0.0503096); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2467.86
//
Query:       KHJ31530.1  [L=1370]
Description: putative mrc1-like domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-39  133.5  16.1    7.8e-39  133.5  16.1    5.2  6  MRC1      MRC1-like domain


Domain annotation for each model (and alignments):
>> MRC1  MRC1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.7   4.0    0.0022        39      58     126 ..     207     277 ..     194     296 .. 0.60
   2 ?   -6.8  19.0         1   1.8e+04      22     137 ..     535     623 ..     511     638 .. 0.44
   3 ?   -3.0   0.4      0.52   9.3e+03     101     114 ..     675     690 ..     665     702 .. 0.57
   4 !  133.5  16.1   4.3e-43   7.8e-39       2     145 ..     969    1106 ..     968    1107 .. 0.96
   5 ?   -4.2   1.4         1   1.8e+04      18      45 ..    1116    1142 ..    1112    1158 .. 0.43
   6 ?   -3.7   1.0      0.85   1.5e+04      24      50 ..    1200    1226 ..    1188    1233 .. 0.45

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0022
        MRC1  58 laaekakeereeDdkevekllkdittGglRkrrrrag.gndl.dlsDsDdeeaelrrrkrrrrekkrkall 126
                 +++ k+    ++ +++  +ll++ ++  l k+ ++++ + ++ +l+D +d e+el +    +++ +rka +
  KHJ31530.1 207 VKNSKFLALVQKKKEKQLALLTKTNKDILNKKEKNRNiQIGFeNLEDTEDTEEELGHNGLLQFQPRRKASR 277
                 55555666666666666677777777777744433566788877778888776676666666666655322 PP

  == domain 2  score: -6.8 bits;  conditional E-value: 1
        MRC1  22 GlggvsdeeeedeeddaeleeliDdesedeevdkdelaaekakeereeDdkevekllkdittGglRkrrrraggndldlsDsDdeeaelrrrkrrrrek 120
                 G++   +ee  +  d+a+l++l+    +++ +++++l+++ + ++++++dke e + +  ++  +++ +    ++d + sDs d +             
  KHJ31530.1 535 GITIQTNEER-EI-DQANLDDLL----TKARAEAEHLRKQELANKNKQRDKETELIDDTTEDEDWKEHKD-MSQEDSNSSDSNDSN------------- 613
                 2222233322.11.222333333....3334555555555555555555555544444444444443332.223333333333333............. PP

        MRC1 121 krkallede.kleklakn 137
                         e +l+ l++n
  KHJ31530.1 614 --------EtGLSDLENN 623
                 ........2244444443 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 0.52
        MRC1 101 sDsDdee..aelrrrk 114
                  D+Dde+  + +r+++
  KHJ31530.1 675 TDQDDEDiiHFKRSHA 690
                 3888888543223222 PP

  == domain 4  score: 133.5 bits;  conditional E-value: 4.3e-43
        MRC1    2 kkkasefveeeAeeSeDeyaGlggvsdeeeedeeddaeleeliDdesedeevdkdelaaekakeereeDdkevekllkdittGglRkrrrraggndl 98  
                  +++++++++e+AeeS+DeyaGlgg sde  +deed+  +e++iDde   eev+++++aa++a++er + +k++ kl++di +G+lR r+r   g+++
  KHJ31530.1  969 ESNTRDLFNEQAEESDDEYAGLGGLSDEPGSDEEDE-LIEDMIDDEG-GEEVNEENHAAFFAERERTNNEKQIIKLYHDISKGMLR-RKR---GAEY 1059
                  688999************************999988.*********9.**************************************.665...789* PP

        MRC1   99 dlsDsDdeeaelrrrkrrrrekkrkalledekleklaknpkakAFvk 145 
                  +lsDsDd+ +++rrr+r+++ ++rkall+de+++k+a+npk++AF++
  KHJ31530.1 1060 ELSDSDDDGDARRRRRRQEFIRMRKALLADERVSKIANNPKSQAFLQ 1106
                  *********99**********************************98 PP

  == domain 5  score: -4.2 bits;  conditional E-value: 1
        MRC1   18 DeyaGlggv.sdeeeedeeddaeleeliD 45  
                  ++y  l    + e+++d ++  + ++ i+
  KHJ31530.1 1116 EDYNFLFELeETEDSQDSQN--QSQSKIN 1142
                  44444443312222222222..2333333 PP

  == domain 6  score: -3.7 bits;  conditional E-value: 0.85
        MRC1   24 ggvsdeeeedeeddaeleeliDdesed 50  
                     s+ee+e  + ++ +e+l D+++e+
  KHJ31530.1 1200 SSESGEENESFNVSKLDENLEDNTNEK 1226
                  333444444444444444444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1591  (0.0887389); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.94u 0.31s 00:00:01.25 Elapsed: 00:00:00.49
# Mc/sec: 8377.01
//
Query:       KHJ31531.1  [L=1029]
Description: putative u4 u6 snrna-associated-splicing factor prp24 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.1e-45  151.8   0.2    6.5e-16   57.9   0.2    4.8  4  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    3.7e-32  110.0   2.0      6e-25   86.9   0.0    3.6  3  RRM_occluded  Occluded RNA-recognition motif
    1.4e-07   31.2   0.0     0.0036   16.9   0.1    3.4  3  RRM_5         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    0.00066   19.6   0.0        1.9    8.5   0.0    3.4  3  RL            RL domain
     0.0029   17.6   0.0       0.14   12.2   0.0    3.4  4  Nup35_RRM_2   Nup53/35/40-type RNA recognition motif
  ------ inclusion threshold ------
      0.012   15.7   0.1        5.3    7.2   0.0    3.7  4  RRM_7         RNA recognition motif
      0.046   14.0  17.7        1.7    8.8   0.1    5.1  5  PHM7_cyt      Cytosolic domain of 10TM putative phosphate tra
       0.23   11.3   1.8         28    4.6   0.5    3.0  2  Rop-like      Rop-like


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.0   3.1e-11   6.8e-08       1      69 [.     574     640 ..     574     641 .. 0.95
   2 !   40.0   0.0   1.1e-13   2.5e-10       1      65 [.     650     713 ..     650     715 .. 0.97
   3 !   57.9   0.2   2.9e-19   6.5e-16       2      69 ..     742     808 ..     741     809 .. 0.96
   4 !   15.8   0.0   4.1e-06    0.0093       5      66 ..     873     930 ..     869     934 .. 0.88

  Alignments for each domain:
  == domain 1  score: 32.2 bits;  conditional E-value: 3.1e-11
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ++V+nLpp+vt+ ++k +F+++  i+s+ l + e +++   a +e  ++ed ++Al   ++k +g+r++
  KHJ31531.1 574 VIVTNLPPEVTQTKVKNYFKDYAHINSLILKT-EIDNKSSLALIELRTREDVQSALL-KDKKYFGDRQI 640
                 68***********************9999988.799999******************.*********98 PP

  == domain 2  score: 40.0 bits;  conditional E-value: 1.1e-13
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEET CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklg 65 
                 l+V+n+pp+++++   +lF+++G+i si+ ++ + ++s++f +++F + + Ae+A++ lng  lg
  KHJ31531.1 650 LYVTNFPPTADDNYFQKLFKDCGEILSIRWPSVKYRTSRRFVYITFRTLRGAEAAVQ-LNGLSLG 713
                 8********************************************************.***8876 PP

  == domain 3  score: 57.9 bits;  conditional E-value: 2.9e-19
                 EEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   2 fVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                  V+nL ++++ee++k+ Fsk+G ++++++ ++  gkskg af+ Fe+ke+A +Ale l+++kl++++l
  KHJ31531.1 742 HVTNLDTSLNEEDVKKTFSKYGTVQKVNILKKLSGKSKGAAFIVFETKEEASAALE-LDKTKLKSSVL 808
                 59******************************************************.******99876 PP

  == domain 4  score: 15.8 bits;  conditional E-value: 4.1e-06
                 SETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTT.EEETT CS
       RRM_1   5 nLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealng.kklgg 66 
                 n+p ++++  ++ l s fG+i+++ l +d     +  a++eF ++ +A k +  l + + l+g
  KHJ31531.1 873 NIPDTINDARIRLLCSSFGEITRLVLRPD-----HQGAIIEFSNSISAGKSILGLENyEILPG 930
                 99**************************9.....999*************9999998555555 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.1   0.00062       1.4       2      56 ..     572     629 ..     571     644 .. 0.76
   2 !   11.8   0.2   7.4e-05      0.17       3      69 ..     740     809 ..     738     814 .. 0.76
   3 !   86.9   0.0   2.7e-28     6e-25       2      77 ..     867     942 ..     866     944 .. 0.97

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00062
  RRM_occluded   2 rtisllplsDtvnkariralveekegeikkivLvpd....heGAivefkdekiagkasL 56 
                    t+ + +l+  v+++++++ ++++ ++i+ ++L ++     + A++e++ ++++  a+L
    KHJ31531.1 572 TTVIVTNLPPEVTQTKVKNYFKDY-AHINSLILKTEidnkSSLALIELRTREDVQSALL 629
                   588899******************.9999999988622113457888888777766666 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 7.4e-05
  RRM_occluded   3 tisllplsDtvnkariralveekegeikkivLvp....dheGAivefkdekiagkasLaLdgsefegkklr 69 
                    i + +l    n++ +++ ++++ g ++k+ +      + +GA  ++ ++k  + a+L+Ld ++++  +l+
    KHJ31531.1 740 EIHVTNLDTSLNEEDVKKTFSKY-GTVQKVNILKklsgKSKGAAFIVFETKEEASAALELDKTKLKSSVLS 809
                   5788999999*************.99999976541111445555555556667899*******99988876 PP

  == domain 3  score: 86.9 bits;  conditional E-value: 2.7e-28
  RRM_occluded   2 rtisllplsDtvnkariralveekegeikkivLvpdheGAivefkdekiagkasLaLdgsef.egkklrcGtvkdLk 77 
                   rti+ll+++Dt+n+arir l+++  gei+++vL+pdh+GAi+ef+++ +agk +L L+++e+  g++l++Gt+kdL+
    KHJ31531.1 867 RTITLLNIPDTINDARIRLLCSSF-GEITRLVLRPDHQGAIIEFSNSISAGKSILGLENYEIlPGQRLKTGTLKDLF 942
                   9***********************.************************************956************7 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0029       6.5      18      96 ..     563     642 ..     546     666 .. 0.80
   2 !   16.9   0.1   1.6e-06    0.0036      23     110 ..     735     824 ..     716     833 .. 0.79
   3 ?    3.5   0.0     0.023        51      36     100 ..     875     939 ..     857     955 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0029
       RRM_5  18 pgaagvaegsVllVyglepdkvnldklFnlfclYgnvervkf...lktkketalvqmgdasaveravqHLnnaklfgk.rlev 96 
                 + ++   e++ ++V++l p +v+  k+ n f  Y  ++ + +   + +k   al+++    +v+ a+  L+++k fg  ++ v
  KHJ31531.1 563 KNLKRDRENTTVIVTNLPP-EVTQTKVKNYFKDYAHINSLILkteIDNKSSLALIELRTREDVQSAL--LKDKKYFGDrQISV 642
                 55666789999******77.58899*************97553345678999************997..88888888745655 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 1.6e-06
       RRM_5  23 vaegsVllVyglepdkvnldklFnlfclYgnvervkflkt....kketalvqmgdasaveravqHLnnaklfgkrlevalSKqqavsekepf 110
                 +ae+  + V++l+++ +n + +   f+ Yg v++v +lk      k++a++      ++  a++ L  +kl  + l v +SK+++  +    
  KHJ31531.1 735 TAESREIHVTNLDTS-LNEEDVKKTFSKYGTVQKVNILKKlsgkSKGAAFIVFETKEEASAALE-LDKTKLKSSVLSVEISKERNFKPIATI 824
                 455666789999975.89999*****************96333257899999999999887775.******************998765544 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.023
       RRM_5  36 pdkvnldklFnlfclYgnvervkflktkketalvqmgdasaveravqHLnnaklf.gkrlevalSK 100
                 pd++n  ++  l + +g++ r+ +l+  ++ a+++ +++ ++ +++  L+n ++  g+rl+    K
  KHJ31531.1 875 PDTINDARIRLLCSSFGEITRL-VLRPDHQGAIIEFSNSISAGKSILGLENYEILpGQRLKTGTLK 939
                 578888888889999******7.78999999******************99986548888876655 PP

>> RL  RL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0069        15      15      65 ..     573     626 ..     559     633 .. 0.75
   2 ?    0.8   0.0      0.21   4.7e+02      20      42 ..     745     767 ..     734     796 .. 0.85
   3 !    8.5   0.0   0.00086       1.9      11      60 ..     863     912 ..     849     920 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0069
          RL  15 rsvLiscpskisekkllkylsqhGkinkhFf...YeskgvyavvEFsekesias 65 
                   +  ++p++++++k+ +y+  + +in++       +k   a++E   +e ++s
  KHJ31531.1 573 TVIVTNLPPEVTQTKVKNYFKDYAHINSLILkteIDNKSSLALIELRTREDVQS 626
                 3344589*********************98722245677799999999999965 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.21
          RL  20 scpskisekkllkylsqhGkink 42 
                 ++ +  +e+++ k +s++G+++k
  KHJ31531.1 745 NLDTSLNEEDVKKTFSKYGTVQK 767
                 5678899*************987 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00086
          RL  11 eQAersv.LiscpskisekkllkylsqhGkinkhFfYeskgvyavvEFsek 60 
                 e A+r++ L+++p  i+  ++   +s++G+i+++         a++EFs+ 
  KHJ31531.1 863 EIAKRTItLLNIPDTINDARIRLLCSSFGEITRLVLRP-DHQGAIIEFSNS 912
                 6799998799**********************986543.334588888875 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.83   1.9e+03       2      53 .]     572     628 ..     571     628 .. 0.67
   2 !   12.2   0.0   6.3e-05      0.14      21      53 .]     668     705 ..     657     705 .. 0.91
   3 ?   -1.7   0.0       1.3   2.9e+03      24      53 .]     762     796 ..     751     796 .. 0.72
   4 ?    0.2   0.0      0.35   7.9e+02      23      49 ..     889     915 ..     875     918 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.83
  Nup35_RRM_2   2 twvaVsGydteli.elVlehFasfGeIvk....hyvpkevsvmyvkfesekdaekAL 53 
                  t+v+V+  ++e    +V  +F+++ +I+      ++++++s++ ++ +++ d + AL
   KHJ31531.1 572 TTVIVTNLPPEVTqTKVKNYFKDYAHINSlilkTEIDNKSSLALIELRTREDVQSAL 628
                  666666666665546778899999888874333444488888888888887777776 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 6.3e-05
  Nup35_RRM_2  21 FasfGeIvkhyvp.....kevsvmyvkfesekdaekAL 53 
                  F+++GeI  +  p      ++ ++y++f++ + ae A+
   KHJ31531.1 668 FKDCGEILSIRWPsvkyrTSRRFVYITFRTLRGAEAAV 705
                  99*******99999999999***************997 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1.3
  Nup35_RRM_2  24 fGeIvkhyvp.....kevsvmyvkfesekdaekAL 53 
                  +G + k ++      k++  +++ fe++ +a  AL
   KHJ31531.1 762 YGTVQKVNILkklsgKSKGAAFIVFETKEEASAAL 796
                  555555555455555888899999****9999997 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.35
  Nup35_RRM_2  23 sfGeIvkhyvpkevsvmyvkfesekda 49 
                  sfGeI++   ++    ++++f ++ +a
   KHJ31531.1 889 SFGEITRLVLRPDHQGAIIEFSNSISA 915
                  6******99998899999999888887 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0         4   8.9e+03      30      36 ..     461     472 ..     457     497 .. 0.59
   2 ?    3.0   0.0     0.048   1.1e+02       4      28 ..     574     598 ..     571     605 .. 0.90
   3 ?   -0.3   0.0      0.52   1.2e+03       5      39 ..     651     687 ..     649     728 .. 0.74
   4 ?    7.2   0.0    0.0023       5.3       1      63 [.     738     792 ..     738     821 .. 0.67

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 4
       RRM_7  30 vdwPkk.....a 36 
                 +dwP+k      
  KHJ31531.1 461 LDWPEKmmevyV 472
                 789988543221 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.048
       RRM_7   4 vFvGGlPiDiteeelkatfkefgkv 28 
                 v v  lP+++t++++k+ fk ++++
  KHJ31531.1 574 VIVTNLPPEVTQTKVKNYFKDYAHI 598
                 78999****************9875 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.52
       RRM_7   5 FvGGlPiDiteeelkatfkefgkv.lvdwPkk.aesk 39 
                 +v   P+  +++  ++ fk  g++ ++ wP   ++++
  KHJ31531.1 651 YVTNFPPTADDNYFQKLFKDCGEIlSIRWPSVkYRTS 687
                 5667788889999999999999852699998733333 PP

  == domain 4  score: 7.2 bits;  conditional E-value: 0.0023
       RRM_7   1 srkvFvGGlPiDiteeelkatfkefgkvl.vdwPkkaeskkkaaenskaakgyvflvfedeksv 63 
                 sr + v  l + ++ee++k+tf+++g+v+ v+  kk       +      kg +f+vfe+++  
  KHJ31531.1 738 SREIHVTNLDTSLNEEDVKKTFSKYGTVQkVNILKK------LS---GKSKGAAFIVFETKEEA 792
                 788999999999**************9841333222......21...22457788888765443 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.2     0.013        29      38      71 ..     166     199 ..     140     243 .. 0.72
   2 ?   -0.8   2.6      0.72   1.6e+03      24     107 ..     476     566 ..     462     572 .. 0.60
   3 ?    8.5   0.2   0.00095       2.1       2      34 ..     572     604 ..     571     711 .. 0.82
   4 ?   -0.0   0.0       0.4     9e+02       2      39 ..     739     772 ..     738     775 .. 0.74
   5 ?    8.8   0.1   0.00077       1.7     114     146 ..     772     805 ..     760     820 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.013
    PHM7_cyt  38 vrdvkkldklveerekavrkleaalskykkngkk 71 
                    + ++ k+ +e +++ r+ e+ +sk+kk +++
  KHJ31531.1 166 EATMIEITKIAKEAKEIFRRREQFESKLKKAEES 199
                 3345578888899999999999999998887654 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.72
    PHM7_cyt  24 eelypgkv.vesvqivrdvkkldklveerekavrkleaal......skykkngkklpkkrpthklgflglkligkkvdaidyyrekleeld 107
                 ++  + +v +e +++v++v+k     +ere a+ + e +       + ++++ +++ ++r+++k    +++  +kk  +id  + ++++l+
  KHJ31531.1 476 NNHENATVvLEAINMVHRVAKGVIKRREREAAMYQAEFVNpgaeadCISNQEDQESVSERNKRKRENDEIESTSKKKKTIDQATLQEKNLK 566
                 3333333338889999999999999999999999988764221111222222333345556666666666666677777777666666655 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00095
    PHM7_cyt   2 rTvlvtgiPkelrseeklkeffeel.ypgkvves 34 
                  Tv+vt++P+e++ + k+k++f+++ ++++ + +
  KHJ31531.1 572 TTVIVTNLPPEVT-QTKVKNYFKDYaHINSLILK 604
                 59***********.889******95377776655 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 0.4
    PHM7_cyt   2 rTvlvtgiPkelrseeklkeffeelypgkvvesvqivr 39 
                 r + vt++  +l+ ee++k+ f+++   +v ++v+i +
  KHJ31531.1 739 REIHVTNLDTSLN-EEDVKKTFSKYG--TV-QKVNILK 772
                 5677888888888.899******984..44.6677765 PP

  == domain 5  score: 8.8 bits;  conditional E-value: 0.00077
    PHM7_cyt 114 rekvkkkplgaaFvtfesersaaavak..qakcaa 146
                 + k + k +gaaF+ fe++++a a+++  ++k+++
  KHJ31531.1 772 K-KLSGKSKGAAFIVFETKEEASAALEldKTKLKS 805
                 3.467899****************98777554443 PP

>> Rop-like  Rop-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.5     0.013        28      37      63 ..     171     197 ..     165     198 .. 0.94
   2 ?    4.5   0.0     0.014        31      25      38 ..     359     373 ..     348     377 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.013
                 GHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Rop-like  37 eipevAqktyeafaelaeakaeLkale 63 
                 ei+++A+++ e+f++ ++ + +Lk++e
  KHJ31531.1 171 EITKIAKEAKEIFRRREQFESKLKKAE 197
                 799**********************98 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.014
                 HHHHHH.TTTTGGGH CS
    Rop-like  25 HDLaEd.LPtnyeei 38 
                 HDLaE  LPt+ e +
  KHJ31531.1 359 HDLAEMgLPTALEDV 373
                 *****99***99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1029 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1726  (0.0962686); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.82u 0.28s 00:00:01.10 Elapsed: 00:00:00.45
# Mc/sec: 6903.58
//
Query:       KHJ31532.1  [L=255]
Description: putative msf1 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-22   79.8   0.3    5.7e-13   49.0   0.0    3.0  3  PRELI            PRELI-like family
  ------ inclusion threshold ------
      0.062   13.1   0.0       0.11   12.3   0.0    1.4  1  Phage_integrase  Phage integrase family


Domain annotation for each model (and alignments):
>> PRELI  PRELI-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   0.0   6.3e-17   5.7e-13       3      58 ..      18      73 ..      16      83 .. 0.91
   2 !   24.2   0.0   2.6e-09   2.4e-05      59     100 ..      90     131 ..      86     170 .. 0.85
   3 !    3.5   0.0    0.0064        57     121     154 ..     198     231 ..     189     234 .. 0.88

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 6.3e-17
                HHHHHHT--SBTTBTTEEEEEEEEEEEETTSEEEEEEEEEEEEESSTTSTTTSSSE CS
       PRELI  3 VtaaflrryPnpiskhvisvdvlerelddegklvteRlitlqvrvPrwlkkligva 58
                Vt a++ ryPnp+s+hv+s+dv++re+d +g+l+t R+ +++ r+P+ + k++  +
  KHJ31532.1 18 VTLAYFLRYPNPYSTHVLSTDVISREIDSQGRLHTVRVHRKRTRLPSAVLKFLPHS 73
                899*********************************************99998854 PP

  == domain 2  score: 24.2 bits;  conditional E-value: 2.6e-09
                 EEEEEEEEEEEETTTTEEEEEEEESSSTTTEEEEEEEEEEEE CS
       PRELI  59 ktvyvleesvvdlkkrtlkletrNltfssllkveErvvYkph 100
                  ++y+le+s++d k+  + +e++Nl+++ +l+v E+  Y+ +
  KHJ31532.1  90 SESYILERSTIDIKEGWMRTESKNLDWTGILSVVEKQEYRRQ 131
                 569************************************875 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.0064
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       PRELI 121 lfglsskveklllkkfsenakkgkeglesvlkel 154
                 ++g+++++e ++ ++ ++ ++k+k g+  vl+ +
  KHJ31532.1 198 TKGIQKSIEAIASHRTENHLHKSKDGMVIVLERM 231
                 689999*********9999***********9975 PP

>> Phage_integrase  Phage integrase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.2e-05      0.11      33     113 ..      85     172 ..      76     188 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.2e-05
                      HT--HHHHTT-BGGGEECTTTEEEEE..........EEECSSSSEEEEECTHHHHHHHHHHHHHHCHCCTTTSBSSBETTSSB--HHHHHH CS
  Phage_integrase  33 tGlRisEllsLrvkdldlengvilvh..........eregKgskeravplseealellkellskaleeaeksellfaskrgkplsrqtvrk 113
                       G R sE   L+ + +d+++g ++ +            + K++  r+vplse+  e l    +++      s+++f+s+ g++l ++tvr+
       KHJ31532.1  85 GGGRSSESYILERSTIDIKEGWMRTEsknldwtgilSVVEKQEYRRQVPLSEKNKEDLPIATGTT---GVVSTVIFCSRLGNRLRAKTVRT 172
                      58899********************99999999998778899999******88877777777777...777*****************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       432  (0.024095); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1866.50
//
Query:       KHJ31533.1  [L=530]
Description: putative small nucleolar ribonucleoprotein complex subunit protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-46  158.2   1.4    1.9e-46  157.4   1.4    1.4  1  UTP15_C      UTP15 C terminal
    1.7e-17   63.5   8.0    2.5e-05   24.9   0.0    5.8  6  WD40         WD domain, G-beta repeat
    4.2e-07   30.2   0.2       0.39   11.1   0.0    4.6  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
       0.26   11.2   7.8        1.7    8.5   8.3    1.9  2  Med19        Mediator of RNA pol II transcription subunit 19
       0.59   10.7   2.6         35    5.1   0.0    3.6  4  PQQ_3        PQQ-like domain
        1.6    9.0  13.3        3.9    7.7   7.7    2.4  2  DUF2956      Protein of unknown function (DUF2956)


Domain annotation for each model (and alignments):
>> UTP15_C  UTP15 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.4   1.4   6.5e-50   1.9e-46       5     147 .]     384     527 ..     381     527 .. 0.94

  Alignments for each domain:
  == domain 1  score: 157.4 bits;  conditional E-value: 6.5e-50
     UTP15_C   5 eeadivie...ekkkkklkkydklLrkfryskALdavlekkvekspevvvtlleeLrhRgalraALagrdeeslepiLkfllkhitdpryvsllvdvan 100
                 +ea+++ie   ++++k ++ ++++Lr+++y+kALd++l kk+  +  +v+++l+ LrhR+alr+AL+grde +l pi k++++ + dpryvs+++dv  
  KHJ31533.1 384 KEAEFIIEgqeQRRRKSESAWERDLRQGKYAKALDQILVKKM--PSITVLSVLQHLRHRSALRTALEGRDEITLRPIFKWVSNRLIDPRYVSICTDVSL 480
                 7899999744344999************************55..777778************************************************* PP

     UTP15_C 101 vlldlyseklgqseeldelvkrLkrkvreevelakellelkGmlell 147
                 +lld+ys+++ +s el+++++ L+++ r ev +a+++++++Gml+ll
  KHJ31533.1 481 LLLDIYSHHVAHSIELEKMIRALHHRARLEVTWAQQACQISGMLKLL 527
                 ********************************************997 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.5   7.4e+03      11      21 ..      40      50 ..      33      69 .. 0.64
   2 ?    0.9   0.0      0.33   9.8e+02      20      38 .]      99     117 ..      79     117 .. 0.82
   3 !   17.9   0.0   1.4e-06    0.0041       4      38 .]     124     160 ..     121     160 .. 0.84
   4 !   18.7   0.3   7.7e-07    0.0023       4      38 .]     167     204 ..     164     204 .. 0.72
   5 ?   -1.0   0.0       1.3     4e+03       6      28 ..     214     236 ..     209     243 .. 0.74
   6 !   24.9   0.0   8.3e-09   2.5e-05       1      37 [.     249     286 ..     249     287 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.5
                SSEEEEEEETT CS
        WD40 11 ssvtslafspd 21
                s+vt+++f p 
  KHJ31533.1 40 SPVTHISFTPP 50
                46888885443 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.33
                 TTSSEEEEEETTSEEEEEE CS
        WD40  20 pdgawlasGsdDgtvriWd 38 
                 +dg+++++G+d g++ ++d
  KHJ31533.1  99 RDGRLIVAGDDTGKIQVFD 117
                 69999**999888887776 PP

  == domain 3  score: 17.9 bits;  conditional E-value: 1.4e-06
                 EEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 
                 lrt++ H ++v+  +fsp     ++s sdD+tvr+Wd
  KHJ31533.1 124 LRTWEEHkQPVWTAKFSPTVLTsIMSTSDDRTVRLWD 160
                 899999*8889999888887776667899*******9 PP

  == domain 4  score: 18.7 bits;  conditional E-value: 7.7e-07
                 EEEEESSSS.EEEEE..EETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGHss.vtsla..fspdgawlasGsdDgtvriWd 38 
                 + +++GHs+ v++ +      ++++++Gs+D tvr+Wd
  KHJ31533.1 167 TVVFSGHSDyVRCGSfmSGNMSDLIITGSYDSTVRLWD 204
                 55799**5569655433444455599***********9 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 1.3
                 EEESS.SSEEEEEEETTSSEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasG 28 
                 t++ H  +v ++   p+g+ ++++
  KHJ31533.1 214 TFK-HtAPVEDVVSMPSGTQITAA 236
                 565.86789999999999998654 PP

  == domain 6  score: 24.9 bits;  conditional E-value: 8.3e-09
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 g++l++l+ H + vtsl+  ++g+ l+sG+ Dg+v+++
  KHJ31533.1 249 GKPLQILKNHqKTVTSLCLASNGSRLVSGGLDGHVKVF 286
                 689*******999***********************97 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00013      0.39      47      82 ..      98     133 ..      82     149 .. 0.88
   2 ?   -2.3   0.0       1.9   5.6e+03      56      86 ..     150     179 ..     145     184 .. 0.75
   3 !   10.7   0.0   0.00017      0.49      35      71 ..     256     292 ..     186     310 .. 0.88
   4 ?    2.3   0.0     0.072   2.2e+02      56      88 ..     474     504 ..     468     511 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00013
  ANAPC4_WD40  47 kpdgklLavaysdgevrlldaesgkvvhslsvksek 82 
                  + dg+l++ + + g+++++d++s  ++++++ +++ 
   KHJ31533.1  98 RRDGRLIVAGDDTGKIQVFDVQSRAILRTWEEHKQP 133
                  78***************************9988874 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.9
  ANAPC4_WD40  56 aysdgevrlldaesgkvvhslsvksekavtc 86 
                    +d +vrl d  +g+    +s +s+  v c
   KHJ31533.1 150 TSDDRTVRLWDLPTGESTVVFSGHSD-YVRC 179
                  45677999999999999888887777.3665 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 0.00017
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgk 71 
                  ++++++v+sL+   +g+ L+ +  dg+v++++    +
   KHJ31533.1 256 KNHQKTVTSLCLASNGSRLVSGGLDGHVKVFETTGWN 292
                  68999************************99876555 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.072
  ANAPC4_WD40  56 aysdgevrlldaesgkvvhslsvksekavtclg 88 
                   + d ++ lld++s +v hs++ ++   +  l+
   KHJ31533.1 474 ICTDVSLLLLDIYSHHVAHSIELEKM--IRALH 504
                  57888999*************99987..77666 PP

>> Med19  Mediator of RNA pol II transcription subunit 19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.45   1.3e+03      61     108 ..     240     290 ..     228     301 .. 0.72
   2 ?    8.5   8.3   0.00057       1.7     116     163 ..     337     384 ..     326     401 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.45
       Med19  61 enssLrsliekP.Piggkellpltssala..GfrLhaGPlpeqyrllkkqe 108
                 + s L  +  kP  i++++ + +ts  la  G rL +G l+ ++++++++ 
  KHJ31533.1 240 QISVLDIIAGKPlQILKNHQKTVTSLCLAsnGSRLVSGGLDGHVKVFETTG 290
                 455566666677447888888999998855599*******99999887765 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00057
       Med19 116 khkkskvkdakseetlsdseteegfekkhkkkkkedDkerkkkkkekk 163
                  h+k k++d  +e  +  + + e ++kk kk+k+e Dke k k    k
  KHJ31533.1 337 GHEKVKQRDRDKEMQALIEGSLEKYDKKSKKRKREIDKEVKEKYLASK 384
                 588888888666666665668999***************998865555 PP

>> PQQ_3  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.012        35      20      39 ..     100     119 ..      91     120 .. 0.89
   2 ?   -3.2   0.0       4.6   1.4e+04       3      22 ..     133     154 ..     132     156 .. 0.62
   3 ?    3.4   0.0      0.04   1.2e+02      22      40 .]     189     207 ..     157     207 .. 0.77
   4 ?   -1.5   0.0       1.3   3.9e+03      21      37 ..     271     287 ..     260     295 .. 0.60

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.012
       PQQ_3  20 dgglvyvgtgdGtlyAlDae 39 
                 dg+l+++g++ G++  +D +
  KHJ31533.1 100 DGRLIVAGDDTGKIQVFDVQ 119
                 899***************87 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 4.6
       PQQ_3   3 vlWsvqlpgpvnssp..avdgg 22 
                 ++W+ ++   v +s   + d++
  KHJ31533.1 133 PVWTAKFSPTVLTSImsTSDDR 154
                 5788888777777777333444 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.04
       PQQ_3  22 glvyvgtgdGtlyAlDaet 40 
                 +l+ +g++d t++  D++t
  KHJ31533.1 189 DLIITGSYDSTVRLWDPRT 207
                 5899***********9998 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 1.3
       PQQ_3  21 gglvyvgtgdGtlyAlD 37 
                 g +++ g+ dG++  ++
  KHJ31533.1 271 GSRLVSGGLDGHVKVFE 287
                 44555555577665554 PP

>> DUF2956  Protein of unknown function (DUF2956)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.3     0.017        49      26      54 ..     318     350 ..     307     355 .. 0.75
   2 ?    7.7   7.7    0.0013       3.9      32      65 ..     354     387 ..     350     411 .. 0.69

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.017
     DUF2956  26 kliaqGiekGiaeYkkq....qkekaReadkar 54 
                 + i  G++ Gi   k +    +k k+R++dk+ 
  KHJ31533.1 318 RHIIVGLQSGIMSIKTRlsghEKVKQRDRDKEM 350
                 667789*****9999753333788888888875 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0013
     DUF2956  32 iekGiaeYkkqqkekaReadkarkkqlkkkekee 65 
                 ie  +++Y k+ k+++Re+dk+ k++  ++++ e
  KHJ31533.1 354 IEGSLEKYDKKSKKRKREIDKEVKEKYLASKEAE 387
                 677799******************9983333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1362  (0.0759663); expected 358.6 (0.02)
Passed bias filter:                      690  (0.0384851); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 3624.39
//
Query:       KHJ31534.1  [L=565]
Description: putative anaphase control protein cut9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.4e-31  104.8   3.1     0.0053   16.8   0.1   10.1 10  TPR_2         Tetratricopeptide repeat
    4.1e-26   89.7   0.0      0.002   17.9   0.2    9.2  9  TPR_1         Tetratricopeptide repeat
    5.2e-26   90.7  13.2    1.3e-23   83.0   0.8    5.3  5  ANAPC3        Anaphase-promoting complex, cyclosome, subunit 
    4.5e-20   71.9   6.2       0.02   15.4   0.0    7.6  8  TPR_19        Tetratricopeptide repeat
    5.5e-20   71.4   7.2    3.3e-08   33.7   0.0    8.4  8  TPR_12        Tetratricopeptide repeat
      5e-19   66.9   0.2      0.052   13.8   0.0    9.3  9  TPR_8         Tetratricopeptide repeat
    3.2e-15   55.5   6.4       0.17   12.8   0.0    9.1  9  TPR_14        Tetratricopeptide repeat
    1.5e-13   50.1   0.4     0.0011   18.7   0.1    6.8  7  TPR_10        Tetratricopeptide repeat
    1.1e-10   42.0   5.0        0.2   12.3   0.2    7.6  9  TPR_16        Tetratricopeptide repeat
    5.2e-10   38.8   1.5        1.1    9.1   0.0    6.8  7  TPR_11        TPR repeat
    3.9e-08   33.4   5.2        4.8    8.0   0.1    7.7  7  TPR_6         Tetratricopeptide repeat
    1.3e-06   28.0   7.4        4.6    7.5   0.0    7.6  8  TPR_7         Tetratricopeptide repeat
     0.0013   18.8   3.0        4.6    7.5   0.1    4.9  5  TPR_9         Tetratricopeptide repeat
     0.0035   17.3   0.0        9.8    6.3   0.0    4.0  4  TPR_3         Tetratricopeptide repeat
     0.0054   16.1   2.6         17    4.7   0.0    4.7  4  TPR_MalT      MalT-like TPR region
  ------ inclusion threshold ------
       0.01   15.9   2.7         21    5.2   0.0    3.6  4  SRP_TPR_like  Putative TPR-like repeat
      0.014   15.7   0.7       0.11   12.7   0.0    2.9  2  TPR_5         Tetratrico peptide repeat
      0.058   13.7   0.1       0.14   12.5   0.1    1.6  1  PWI           PWI domain
      0.096   12.8   0.2         12    6.0   0.0    4.0  3  MIT           MIT (microtubule interacting and transport) dom


Domain annotation for each model (and alignments):
>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       2.6   2.4e+03      12      33 ..      13      34 ..      10      35 .. 0.83
   2 !    8.3   0.0    0.0029       2.7       5      24 ..      39      58 ..      36      60 .. 0.89
   3 ?    3.8   0.1     0.083        78       4      22 ..      71      89 ..      68      91 .. 0.88
   4 !   16.8   0.1   5.7e-06    0.0053       4      31 ..     150     177 ..     147     179 .. 0.93
   5 ?    2.9   0.0      0.15   1.5e+02       3      24 ..     262     283 ..     260     293 .. 0.77
   6 !   11.7   0.0   0.00023      0.22       4      33 ..     331     360 ..     328     361 .. 0.92
   7 !    7.4   0.0    0.0058       5.4       4      31 ..     365     392 ..     363     394 .. 0.86
   8 !   14.2   0.0   3.7e-05     0.035       2      31 ..     431     460 ..     430     463 .. 0.92
   9 !   12.1   0.1   0.00017      0.17       5      29 ..     475     499 ..     473     501 .. 0.94
  10 !   15.7   0.0   1.3e-05     0.012       2      34 .]     506     538 ..     505     538 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 2.6
       TPR_2 12 yklgdyeeAleafekAleldPn 33
                +++ +y+ A+   +k l+l  n
  KHJ31534.1 13 LNKHQYDSAVFIGDKLLALTQN 34
                67899****9999999999876 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0029
       TPR_2  5 ynlGlayyklgdyeeAleaf 24
                ++l+++++  g+y +Al ++
  KHJ31534.1 39 FWLAQVHFSTGNYTRALSFL 58
                89**************9876 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.083
       TPR_2  4 lynlGlayyklgdyeeAle 22
                 y  + +++k+ +++eAl+
  KHJ31534.1 71 QYLAAHCLIKQAKFDEALA 89
                68899************96 PP

  == domain 4  score: 16.8 bits;  conditional E-value: 5.7e-06
       TPR_2   4 lynlGlayyklgdyeeAleafekAleld 31 
                 ++ +Gl+++k++ +++A+e+++ A+++d
  KHJ31534.1 150 CFLRGLCHAKRNAFDRAKECYKDAVRID 177
                 899**********************987 PP

  == domain 5  score: 2.9 bits;  conditional E-value: 0.15
       TPR_2   3 alynlGlayyklgdyeeAleaf 24 
                 +l  ++++++ + +++eAl   
  KHJ31534.1 262 LLLSQADLLFTQCRFKEALSIT 283
                 6777899***********9755 PP

  == domain 6  score: 11.7 bits;  conditional E-value: 0.00023
       TPR_2   4 lynlGlayyklgdyeeAleafekAleldPn 33 
                 + + G  y+  ++  eA+++f kA   dP+
  KHJ31534.1 331 WLAVGVYYLVTNKVSEARRYFSKASMMDPH 360
                 8889********************999996 PP

  == domain 7  score: 7.4 bits;  conditional E-value: 0.0058
       TPR_2   4 lynlGlayyklgdyeeAleafekAleld 31 
                 +   +   ++ g++++A+ a+  A +l 
  KHJ31534.1 365 WIGFAHTFAQEGEHDQAISAYSTAARLF 392
                 6666788999**************9985 PP

  == domain 8  score: 14.2 bits;  conditional E-value: 3.7e-05
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleld 31 
                  +l+++G + y+++++eeA+  f kAl+++
  KHJ31534.1 431 LLLNEMGIVFYHQDKLEEAVVMFSKALSIA 460
                 5799***********************997 PP

  == domain 9  score: 12.1 bits;  conditional E-value: 0.00017
       TPR_2   5 ynlGlayyklgdyeeAleafekAle 29 
                  nlG ay++l +++eAl  f+++l+
  KHJ31534.1 475 SNLGHAYRRLYRLDEALVEFNQVLR 499
                 59********************997 PP

  == domain 10  score: 15.7 bits;  conditional E-value: 1.3e-05
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                  + ++ Gl+++ l ++ eA++ f +Al++ P++
  KHJ31534.1 506 AVFCAKGLVLMDLRRPFEAINIFHEALAISPQD 538
                 677899*************************86 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.052        49       7      24 ..      41      58 ..      39      60 .. 0.86
   2 ?    3.0   0.1       0.1        97       8      21 ..      75      88 ..      69      89 .. 0.87
   3 !   17.9   0.2   2.1e-06     0.002       4      31 ..     150     177 ..     147     180 .. 0.91
   4 ?   -0.3   0.0       1.2   1.1e+03       4      21 ..     263     280 ..     260     282 .. 0.81
   5 !    6.7   0.0    0.0073       6.9       3      34 .]     330     361 ..     328     361 .. 0.88
   6 !    9.3   0.0    0.0011       1.1       8      30 ..     369     391 ..     363     392 .. 0.86
   7 !   17.7   0.0   2.5e-06    0.0023       3      30 ..     432     459 ..     430     462 .. 0.92
   8 !    9.0   0.0    0.0014       1.3       4      28 ..     474     498 ..     471     500 .. 0.90
   9 !    8.4   0.0     0.002       1.9       1      34 []     505     538 ..     505     538 .. 0.93

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.052
                HHHHHHHTT-HHHHHHHH CS
       TPR_1  7 lGnayfklgkydeAleyy 24
                l++++f+ g+y  Al + 
  KHJ31534.1 41 LAQVHFSTGNYTRALSFL 58
                89************9776 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.1
                HHHHHHTT-HHHHH CS
       TPR_1  8 GnayfklgkydeAl 21
                ++++ k+ k+deAl
  KHJ31534.1 75 AHCLIKQAKFDEAL 88
                89***********9 PP

  == domain 3  score: 17.9 bits;  conditional E-value: 2.1e-06
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALeln 31 
                 ++ +G+++ k + +d A e+y+ A++++
  KHJ31534.1 150 CFLRGLCHAKRNAFDRAKECYKDAVRID 177
                 688**********************998 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 1.2
                 HHHHHHHHHHTT-HHHHH CS
       TPR_1   4 lynlGnayfklgkydeAl 21 
                 l   + ++f + +++eAl
  KHJ31534.1 263 LLSQADLLFTQCRFKEAL 280
                 6667889999******98 PP

  == domain 5  score: 6.7 bits;  conditional E-value: 0.0073
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPnn 34 
                 ++   G+ y+  +k  eA  y++kA   +P++
  KHJ31534.1 330 TWLAVGVYYLVTNKVSEARRYFSKASMMDPHF 361
                 57777999*****************9999986 PP

  == domain 6  score: 9.3 bits;  conditional E-value: 0.0011
                 HHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1   8 GnayfklgkydeAleyyekALel 30 
                 ++++ + g++d+A+ +y+ A +l
  KHJ31534.1 369 AHTFAQEGEHDQAISAYSTAARL 391
                 78999*************99665 PP

  == domain 7  score: 17.7 bits;  conditional E-value: 2.5e-06
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALel 30 
                  l+ +G +++++ k++eA+  ++kAL++
  KHJ31534.1 432 LLNEMGIVFYHQDKLEEAVVMFSKALSI 459
                 6899**********************98 PP

  == domain 8  score: 9.0 bits;  conditional E-value: 0.0014
                 HHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekAL 28 
                   nlG+ay++l ++deAl  ++++L
  KHJ31534.1 474 RSNLGHAYRRLYRLDEALVEFNQVL 498
                 57*****************999998 PP

  == domain 9  score: 8.4 bits;  conditional E-value: 0.002
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnPnn 34 
                 a +++ +G++++ l ++ eA+  + +AL + P++
  KHJ31534.1 505 AAVFCAKGLVLMDLRRPFEAINIFHEALAISPQD 538
                 678999**************************86 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.0   0.8   1.4e-26   1.3e-23       1      80 [.      14      92 ..      14      93 .. 0.98
   2 ?    4.5   0.1     0.042        40      27      56 ..     151     181 ..     133     193 .. 0.80
   3 ?    4.0   1.4     0.064        60      18      69 ..     255     307 ..     236     313 .. 0.75
   4 ?    0.7   0.0      0.66   6.2e+02      23      79 ..     326     385 ..     309     388 .. 0.61
   5 ?    1.4   0.0      0.39   3.7e+02       2      80 ..     443     529 ..     442     531 .. 0.63

  Alignments for each domain:
  == domain 1  score: 83.0 bits;  conditional E-value: 1.4e-26
                HTT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3  1 dqnnyknAiflaerllaaetespedayllAlclylngqykrAyellrkaklnskslgcrylfAqcllkLkkyeeAiaaLe 80
                ++++y++A+f++++ll a t++++da++lA++++++g+y+rA+ +l++ +l s++  c yl+A+cl+k+ k++eA+a+L+
  KHJ31534.1 14 NKHQYDSAVFIGDKLL-ALTQNDKDAFWLAQVHFSTGNYTRALSFLSREDLVSRNSSCQYLAAHCLIKQAKFDEALAILG 92
                68**************.*************************************************************98 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.042
                 HHHHHHHHHTT-HHHHHHHHHCT.SHHHC-H CS
      ANAPC3  27 yllAlclylngqykrAyellrka.klnsksl 56 
                 +l +lc+ +++ ++rA e +++a +++ +  
  KHJ31534.1 151 FLRGLCHAKRNAFDRAKECYKDAvRIDVQCF 181
                 4559****************99977666655 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.064
                 HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHT CS
      ANAPC3  18 aetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkL 69 
                   + +p+ ++  A  l+ + ++k+A+ ++++  ++++ +  +  l+  cl++L
  KHJ31534.1 255 NLSANPDLLLSQADLLFTQCRFKEALSITNSIlQEDKYNFSIYPLHLACLYEL 307
                 445566667778*******************9888777777777777888777 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.66
                 HHHHHHH..HHHHHHTT-HHHHHHHHHCTSHHHC-H.HHHHHHHHHHHHTT-HHHHHHHH CS
      ANAPC3  23 pedayll..AlclylngqykrAyellrkaklnsksl.gcrylfAqcllkLkkyeeAiaaL 79 
                 +e   +l  +  ++ +++  +A ++++ka   + +   +++ fA++  + +++++Ai+a+
  KHJ31534.1 326 DEPCTWLavGVYYLVTNKVSEARRYFSKASMMDPHFgPAWIGFAHTFAQEGEHDQAISAY 385
                 444455544566777777777777777773333333477777777777777777777776 PP

  == domain 5  score: 1.4 bits;  conditional E-value: 0.39
                 TT-HHHHHHHHHHHH..HHH--HHHHHH......HHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3   2 qnnyknAiflaerlla.aetespedayl......lAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                 q ++++A+ +++++l+ a+   ++++ +      l+ ++ ++ + ++A+  +++  ++ +++ ++   ++ +l +L +  eAi+++ 
  KHJ31534.1 443 QDKLEEAVVMFSKALSiADEIESDSLAWvstrsnLGHAYRRLYRLDEALVEFNQVlREGGRDAAVFCAKGLVLMDLRRPFEAINIFH 529
                 566778888888888433333333344434444468888888888888888888855555555554455577788888888888875 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   3.2e-05      0.03       5      50 ..      16      60 ..      12      67 .. 0.93
   2 !   10.9   0.3   0.00055      0.52      24      48 ..      67      91 ..      62      93 .. 0.89
   3 ?    1.5   0.0      0.45   4.3e+02      32      65 ..     154     188 ..     128     191 .. 0.74
   4 !    9.5   0.1    0.0015       1.4      11      56 ..     247     291 ..     241     296 .. 0.77
   5 !   15.4   0.0   2.1e-05      0.02       8      51 ..     345     388 ..     341     393 .. 0.91
   6 ?    2.9   0.0      0.17   1.6e+02      12      52 ..     417     457 ..     414     464 .. 0.82
   7 !    9.0   0.0    0.0021       1.9       4      61 ..     443     507 ..     440     512 .. 0.85
   8 ?    5.3   0.0     0.031        29       7      25 ..     521     539 ..     515     551 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 3.2e-05
      TPR_19  5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAealLda 50
                 +y++A+ +  ++l+   ++ +a   LA++++++g+++ A   L++
  KHJ31534.1 16 HQYDSAVFIGDKLLALTQNDKDAFW-LAQVHFSTGNYTRALSFLSR 60
                69***********************.**************999976 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00055
      TPR_19 24 naearllLAeallalgqldeAealL 48
                n+  ++l A +l+++  +deA a+L
  KHJ31534.1 67 NSSCQYLAAHCLIKQAKFDEALAIL 91
                66778999***************99 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.45
      TPR_19  32 AeallalgqldeAealLdalpeedpdd.aryasLl 65 
                   ++ + + +d A+++ +++ + d ++ ++  +L+
  KHJ31534.1 154 GLCHAKRNAFDRAKECYKDAVRIDVQCfEAFEQLM 188
                 5588999*********9999888877656665665 PP

  == domain 4  score: 9.5 bits;  conditional E-value: 0.0015
      TPR_19  11 lalleqalqedpknaearllLAeallalgqldeAealLdalpeedp 56 
                 ++ l+  +     n++++l  A++l+ + +++eA  + + +++ed+
  KHJ31534.1 247 AETLSTHYNL-SANPDLLLSQADLLFTQCRFKEALSITNSILQEDK 291
                 4444443333.3489999999********************99986 PP

  == domain 5  score: 15.4 bits;  conditional E-value: 2.1e-05
      TPR_19   8 aeAlalleqalqedpknaearllLAeallalgqldeAealLdal 51 
                  eA +++++a   dp+ + a+++ A    + g+ d+A+ + +++
  KHJ31534.1 345 SEARRYFSKASMMDPHFGPAWIGFAHTFAQEGEHDQAISAYSTA 388
                 69***********************************9887765 PP

  == domain 6  score: 2.9 bits;  conditional E-value: 0.17
      TPR_19  12 alleqalqedpknaearllLAeallalgqldeAealLdalp 52 
                 ++l+ a+     ++ ++  + ++ + +  l+eA  + ++++
  KHJ31534.1 417 EFLKTAYGLCKTDPLLLNEMGIVFYHQDKLEEAVVMFSKAL 457
                 57888888888899999999999999999999998887765 PP

  == domain 7  score: 9.0 bits;  conditional E-value: 0.0021
      TPR_19   4 egdyaeAlalleqalqedpk...naearl....lLAeallalgqldeAealLdalpeedpddary 61 
                 + +++eA+ ++++al+ + +   ++ a+     +L  a+  l +ldeA    +++++e   da++
  KHJ31534.1 443 QDKLEEAVVMFSKALSIADEiesDSLAWVstrsNLGHAYRRLYRLDEALVEFNQVLREGGRDAAV 507
                 78999********998866666666666678889***********************99998876 PP

  == domain 8  score: 5.3 bits;  conditional E-value: 0.031
      TPR_19   7 yaeAlalleqalqedpkna 25 
                 + eA++++ +al+ +p+++
  KHJ31534.1 521 PFEAINIFHEALAISPQDP 539
                 559**************98 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.046        43       9      27 ..      41      59 ..      30      61 .. 0.71
   2 ?    2.6   0.1      0.18   1.7e+02       8      26 ..      73      91 ..      67      93 .. 0.67
   3 ?    4.1   0.0     0.059        56      51      74 ..     153     176 ..     145     179 .. 0.85
   4 ?    1.3   0.0      0.46   4.3e+02       8      24 ..     265     281 ..     244     288 .. 0.74
   5 ?    3.4   0.0     0.099        93      39      72 ..     322     355 ..     312     359 .. 0.82
   6 !    7.7   0.1    0.0046       4.3       7      33 ..     366     392 ..     363     428 .. 0.76
   7 !   33.7   0.0   3.5e-11   3.3e-08       5      73 ..     432     499 ..     429     499 .. 0.94
   8 !    8.4   0.0    0.0028       2.7       8      33 ..     510     535 ..     504     545 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.046
      TPR_12  9 laavlrrlgrydeAlelle 27
                la+v++  g+y+ Al++l 
  KHJ31534.1 41 LAQVHFSTGNYTRALSFLS 59
                6666666666666666654 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.18
      TPR_12  8 nlaavlrrlgrydeAlell 26
                  a++l ++ ++deAl++l
  KHJ31534.1 73 LAAHCLIKQAKFDEALAIL 91
                4567777777777777665 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.059
      TPR_12  51 LgrlyralgryeeAlelleealai 74 
                  g ++ +++ ++ A e +++a++i
  KHJ31534.1 153 RGLCHAKRNAFDRAKECYKDAVRI 176
                 688999999999999999999987 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.46
      TPR_12   8 nlaavlrrlgrydeAle 24 
                   a++l+ + r+ eAl+
  KHJ31534.1 265 SQADLLFTQCRFKEALS 281
                 45666666666666665 PP

  == domain 5  score: 3.4 bits;  conditional E-value: 0.099
      TPR_12  39 pdhpltattlrnLgrlyralgryeeAlelleeal 72 
                 ++hp++  t  + g +y+ +++  eA++++ +a 
  KHJ31534.1 322 DNHPDEPCTWLAVGVYYLVTNKVSEARRYFSKAS 355
                 7899999999999999999999999999998886 PP

  == domain 6  score: 7.7 bits;  conditional E-value: 0.0046
      TPR_12   7 nnlaavlrrlgrydeAlellekaleia 33 
                    a++ ++ g++d+A++ + +a +++
  KHJ31534.1 366 IGFAHTFAQEGEHDQAISAYSTAARLF 392
                 567889999999999999999998776 PP

  == domain 7  score: 33.7 bits;  conditional E-value: 3.5e-11
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeala 73 
                 +ln+++ v +++ +++eA  ++ kal ia ++ + d+++ ++t+ nLg +yr+l r++eAl  ++++l+
  KHJ31534.1 432 LLNEMGIVFYHQDKLEEAVVMFSKALSIADEI-ESDSLAWVSTRSNLGHAYRRLYRLDEALVEFNQVLR 499
                 5778*************************999.7899999*********************99999986 PP

  == domain 8  score: 8.4 bits;  conditional E-value: 0.0028
      TPR_12   8 nlaavlrrlgrydeAlellekaleia 33 
                   ++vl+ l r  eA+ ++++al+i 
  KHJ31534.1 510 AKGLVLMDLRRPFEAINIFHEALAIS 535
                 6799*******************996 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.038        36       5      24 ..      39      58 ..      38      60 .. 0.90
   2 ?    2.3   0.1      0.26   2.4e+02       4      23 ..      71      90 ..      68      92 .. 0.87
   3 !   13.8   0.0   5.5e-05     0.052       2      31 ..     148     177 ..     147     180 .. 0.94
   4 ?    4.1   0.0     0.068        64       4      33 ..     331     360 ..     330     361 .. 0.85
   5 !    8.9   0.0     0.002       1.9       2      29 ..     363     390 ..     362     391 .. 0.89
   6 ?   -0.7   0.0       2.4   2.3e+03      14      32 ..     409     427 ..     408     429 .. 0.86
   7 ?    5.1   0.0     0.034        32      10      31 ..     439     460 ..     432     462 .. 0.81
   8 ?    6.3   0.0     0.014        13       6      28 ..     476     498 ..     472     499 .. 0.92
   9 !    7.4   0.0    0.0059       5.6       3      34 .]     507     538 ..     505     538 .. 0.93

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.038
                HHHHHHHHHTT-HHHHHHHH CS
       TPR_8  5 ynlgsiylklgdyeeAkeyy 24
                ++l+++++++g+y  A +++
  KHJ31534.1 39 FWLAQVHFSTGNYTRALSFL 58
                689*************9876 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.26
                HHHHHHHHHHTT-HHHHHHH CS
       TPR_8  4 yynlgsiylklgdyeeAkey 23
                 y+ +++++k+ +++eA + 
  KHJ31534.1 71 QYLAAHCLIKQAKFDEALAI 90
                6999*************876 PP

  == domain 3  score: 13.8 bits;  conditional E-value: 5.5e-05
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleld 31 
                  ++++ g+++ k + ++ Ake+y+ a+++d
  KHJ31534.1 148 AMCFLRGLCHAKRNAFDRAKECYKDAVRID 177
                 689************************998 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.068
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ++  g  yl +++  eA  y+ ka  +dp 
  KHJ31534.1 331 WLAVGVYYLVTNKVSEARRYFSKASMMDPH 360
                 666777888889999*************95 PP

  == domain 5  score: 8.9 bits;  conditional E-value: 0.002
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekale 29 
                 +a+   +++  + g++++A+++y  a +
  KHJ31534.1 363 PAWIGFAHTFAQEGEHDQAISAYSTAAR 390
                 689999*****************88865 PP

  == domain 6  score: -0.7 bits;  conditional E-value: 2.4
                 TT-HHHHHHHHHHHHHHHH CS
       TPR_8  14 lgdyeeAkeyyekaleldp 32 
                 l+++  A e+++ a  l +
  KHJ31534.1 409 LNNMTLADEFLKTAYGLCK 427
                 789999*******998866 PP

  == domain 7  score: 5.1 bits;  conditional E-value: 0.034
                 HHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8  10 iylklgdyeeAkeyyekaleld 31 
                 +   + ++eeA+  + kal+++
  KHJ31534.1 439 VFYHQDKLEEAVVMFSKALSIA 460
                 5667789*************97 PP

  == domain 8  score: 6.3 bits;  conditional E-value: 0.014
                 HHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyyekal 28 
                 nlg++y+ l +++eA   ++++l
  KHJ31534.1 476 NLGHAYRRLYRLDEALVEFNQVL 498
                 8***************9999987 PP

  == domain 9  score: 7.4 bits;  conditional E-value: 0.0059
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 + + +g+++++l +  eA+  + +al ++p++
  KHJ31534.1 507 VFCAKGLVLMDLRRPFEAINIFHEALAISPQD 538
                 7899**************************86 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.36   3.4e+02       6      25 ..      40      59 ..      36      62 .. 0.88
   2 ?    1.3   0.0      0.86   8.1e+02       4      24 ..      71      91 ..      69      93 .. 0.86
   3 ?    4.4   0.0     0.086        81      11      41 ..     157     187 ..     146     189 .. 0.79
   4 ?    1.9   0.0      0.56   5.3e+02       1      38 [.     260     297 ..     260     302 .. 0.83
   5 ?    2.3   0.0      0.42   3.9e+02       4      39 ..     331     366 ..     330     369 .. 0.85
   6 !    7.6   0.1     0.008       7.6       4      33 ..     365     394 ..     363     403 .. 0.80
   7 !    7.5   0.0     0.009       8.5       5      32 ..     434     461 ..     430     472 .. 0.80
   8 !    8.9   0.2    0.0032         3       7      37 ..     477     507 ..     471     513 .. 0.89
   9 !   12.8   0.0   0.00018      0.17       8      41 ..     512     545 ..     505     548 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.36
      TPR_14  6 alaeallalGdpdeAiallr 25
                 la++++  G++ +A+  l 
  KHJ31534.1 40 WLAQVHFSTGNYTRALSFLS 59
                59*************98776 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.86
      TPR_14  4 llalaeallalGdpdeAiall 24
                ++++a+ l  + ++deA+a+l
  KHJ31534.1 71 QYLAAHCLIKQAKFDEALAIL 91
                5778899999********987 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.086
      TPR_14  11 llalGdpdeAiallrralalaPddaeawlll 41 
                 ++ +  +d+A +++++a++ + +  ea  +l
  KHJ31534.1 157 HAKRNAFDRAKECYKDAVRIDVQCFEAFEQL 187
                 567788************9998877776665 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.56
      TPR_14   1 peallalaeallalGdpdeAiallrralalaPddaeaw 38 
                 p++ll  a++l+++ +++eA+ + + +l+ +  +  ++
  KHJ31534.1 260 PDLLLSQADLLFTQCRFKEALSITNSILQEDKYNFSIY 297
                 6789999***************9999999888776655 PP

  == domain 5  score: 2.3 bits;  conditional E-value: 0.42
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawl 39 
                 +la + ++l   +  eA++++ +a   +P +  aw+
  KHJ31534.1 331 WLAVGVYYLVTNKVSEARRYFSKASMMDPHFGPAWI 366
                 788888888899999*********999999888886 PP

  == domain 6  score: 7.6 bits;  conditional E-value: 0.008
      TPR_14   4 llalaeallalGdpdeAiallrralalaPd 33 
                 +   a+ +++ G++d+Ai ++  a +l+ +
  KHJ31534.1 365 WIGFAHTFAQEGEHDQAISAYSTAARLFMG 394
                 66668999***************9998765 PP

  == domain 7  score: 7.5 bits;  conditional E-value: 0.009
      TPR_14   5 lalaeallalGdpdeAiallrralalaP 32 
                  +++ +++++++++eA+ ++ +al+ a 
  KHJ31534.1 434 NEMGIVFYHQDKLEEAVVMFSKALSIAD 461
                 57899*******************9764 PP

  == domain 8  score: 8.9 bits;  conditional E-value: 0.0032
      TPR_14   7 laeallalGdpdeAiallrralalaPddaea 37 
                 l++a+++l ++deA+  ++++l+ +  da++
  KHJ31534.1 477 LGHAYRRLYRLDEALVEFNQVLREGGRDAAV 507
                 89*********************99999876 PP

  == domain 9  score: 12.8 bits;  conditional E-value: 0.00018
      TPR_14   8 aeallalGdpdeAiallrralalaPddaeawlll 41 
                 + +l+ l++p eAi+++++ala  P+d+ a  ll
  KHJ31534.1 512 GLVLMDLRRPFEAINIFHEALAISPQDPIATELL 545
                 7799***********************9998776 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.15   1.4e+02       8      23 ..      41      56 ..      40      59 .. 0.89
   2 ?   -1.4   0.0       2.5   2.4e+03      15      25 ..      81      91 ..      78      93 .. 0.81
   3 ?    0.1   0.0      0.87   8.2e+02      13      31 ..     158     176 ..     154     179 .. 0.85
   4 ?   -1.6   0.0         3   2.8e+03       9      26 ..     335     352 ..     334     354 .. 0.81
   5 !   10.1   0.0   0.00063       0.6       5      32 ..     433     460 ..     432     465 .. 0.93
   6 !   18.7   0.1   1.2e-06    0.0011       1      29 [.     470     498 ..     470     499 .. 0.89
   7 !    7.9   0.0    0.0031         3       9      31 ..     512     534 ..     511     535 .. 0.93

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.15
      TPR_10  8 LanalrqrgrydeAea 23
                La +++++g+y++A+ 
  KHJ31534.1 41 LAQVHFSTGNYTRALS 56
                9*************86 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.5
      TPR_10 15 rgrydeAeall 25
                + ++deA+a+l
  KHJ31534.1 81 QAKFDEALAIL 91
                77999**9997 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.87
      TPR_10  13 rqrgrydeAealleealai 31 
                  +r+ +d+A + +++a++i
  KHJ31534.1 158 AKRNAFDRAKECYKDAVRI 176
                 5788999999999999986 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 3
      TPR_10   9 analrqrgrydeAealle 26 
                 ++++  +++  eA++++ 
  KHJ31534.1 335 GVYYLVTNKVSEARRYFS 352
                 6788889999****9985 PP

  == domain 5  score: 10.1 bits;  conditional E-value: 0.00063
      TPR_10   5 lnNLanalrqrgrydeAealleealair 32 
                 ln ++++ +++ +++eA+ ++ +al+i 
  KHJ31534.1 433 LNEMGIVFYHQDKLEEAVVMFSKALSIA 460
                 89***********************996 PP

  == domain 6  score: 18.7 bits;  conditional E-value: 1.2e-06
      TPR_10   1 tAsslnNLanalrqrgrydeAealleeal 29 
                 + s+++NL++a+r+++r+deA+  + ++l
  KHJ31534.1 470 WVSTRSNLGHAYRRLYRLDEALVEFNQVL 498
                 6799*****************98887776 PP

  == domain 7  score: 7.9 bits;  conditional E-value: 0.0031
      TPR_10   9 analrqrgrydeAealleealai 31 
                 + +l +++r  eA ++++ealai
  KHJ31534.1 512 GLVLMDLRRPFEAINIFHEALAI 534
                 67999****************98 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0    0.0093       8.8      38      59 ..      39      60 ..      30      68 .. 0.91
   2 ?   -1.1   0.1       3.2     3e+03       1      18 [.      72      89 ..      72      93 .. 0.80
   3 ?    2.0   0.0      0.37   3.5e+02      38      55 ..     151     168 ..     141     183 .. 0.65
   4 ?    3.2   0.0      0.15   1.4e+02      18      60 ..     244     286 ..     238     293 .. 0.79
   5 ?    1.5   0.0      0.51   4.8e+02      31      60 ..     325     354 ..     319     360 .. 0.76
   6 !    9.3   0.0    0.0019       1.8       2      63 ..     333     391 ..     332     396 .. 0.85
   7 ?   -1.9   0.0       5.9   5.5e+03      39      60 ..     435     456 ..     427     461 .. 0.74
   8 !   12.3   0.2   0.00022       0.2       2      68 .]     476     539 ..     475     539 .. 0.96
   9 !    8.3   0.0    0.0037       3.5       2      45 ..     510     550 ..     509     553 .. 0.92

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0093
      TPR_16 38 lllgdaalrqgrlaeAaalyra 59
                ++l+++++  g++++A+ ++ +
  KHJ31534.1 39 FWLAQVHFSTGNYTRALSFLSR 60
                89**************999877 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 3.2
      TPR_16  1 lalaraalragdyddAaa 18
                + +a+ ++++ ++d+A+a
  KHJ31534.1 72 YLAAHCLIKQAKFDEALA 89
                567888999999999997 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.37
      TPR_16  38 lllgdaalrqgrlaeAaa 55 
                 +l+g+++++++ +++A +
  KHJ31534.1 151 FLRGLCHAKRNAFDRAKE 168
                 566677776666666633 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.15
      TPR_16  18 aaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraa 60 
                 +a+ ++l  ++  +++++ ll  +d+++ q r++eA+   ++ 
  KHJ31534.1 244 KAAAETLSTHYNLSANPDLLLSQADLLFTQCRFKEALSITNSI 286
                 67777788888888999*******************9665555 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 0.51
      TPR_16  31 PdaaeAllllgdaalrqgrlaeAaalyraa 60 
                 Pd +  +l+ g+ +l+ + + eA+ ++ +a
  KHJ31534.1 325 PDEPCTWLAVGVYYLVTNKVSEARRYFSKA 354
                 666666888999999999999999888765 PP

  == domain 6  score: 9.3 bits;  conditional E-value: 0.0019
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalra 63 
                 a + ++l  ++  +A++++  a  +d   P    A+ + +  +++ g+++ A+ +y  a+r 
  KHJ31534.1 333 AVGVYYLVTNKVSEARRYFSKASMMD---PHFGPAWIGFAHTFAQEGEHDQAISAYSTAARL 391
                 56778899999999999999999999...999999999999999999999999999888876 PP

  == domain 7  score: -1.9 bits;  conditional E-value: 5.9
      TPR_16  39 llgdaalrqgrlaeAaalyraa 60 
                 + g ++++q  l+eA+  + +a
  KHJ31534.1 435 EMGIVFYHQDKLEEAVVMFSKA 456
                 5588999999999998555555 PP

  == domain 8  score: 12.3 bits;  conditional E-value: 0.00022
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapdap 68 
                 +l++a++r+ + d+A+  ++++l+ +    ++a+   ++g+++  + r  eA+  + +al+ +p++p
  KHJ31534.1 476 NLGHAYRRLYRLDEALVEFNQVLREG---GRDAAVFCAKGLVLMDLRRPFEAINIFHEALAISPQDP 539
                 69************************...99999*******************9999999*****98 PP

  == domain 9  score: 8.3 bits;  conditional E-value: 0.0037
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaal 45 
                 a+++ +++++++ +A++ +++al+     P+++ A  ll+ ++ 
  KHJ31534.1 510 AKGLVLMDLRRPFEAINIFHEALAIS---PQDPIATELLNKVLE 550
                 78999*********************...******999998876 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0         2   1.8e+03       2      12 ..      43      53 ..      27      55 .. 0.61
   2 ?    4.6   0.0     0.028        26       6      28 ..     159     181 ..     154     187 .. 0.81
   3 !    9.1   0.0    0.0011       1.1       2      23 ..     370     391 ..     369     391 .. 0.89
   4 ?    1.8   0.0      0.21     2e+02      18      41 ..     420     443 ..     419     444 .. 0.86
   5 ?    5.1   0.0      0.02        19       3      23 ..     439     459 ..     437     460 .. 0.91
   6 !    6.2   0.0    0.0085         8       1      39 [.     478     516 ..     478     518 .. 0.85
   7 ?    5.5   0.1     0.015        14      12      30 ..     523     541 ..     523     551 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2
      TPR_11  2 dayyeqGkyee 12
                ++ ++ G+y+ 
  KHJ31534.1 43 QVHFSTGNYTR 53
                34455555555 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.028
      TPR_11   6 eqGkyeeAieaYkkAlkldPdna 28 
                 +++ ++ A e+Yk A+++d +  
  KHJ31534.1 159 KRNAFDRAKECYKDAVRIDVQCF 181
                 789999************96655 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.0011
      TPR_11   2 dayyeqGkyeeAieaYkkAlkl 23 
                 + + + G+ ++Ai aY++A +l
  KHJ31534.1 370 HTFAQEGEHDQAISAYSTAARL 391
                 5689***************876 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.21
      TPR_11  18 kkAlkldPdnaeayynLGlayykq 41 
                 k+A  l+ +++ +++++G ++y q
  KHJ31534.1 420 KTAYGLCKTDPLLLNEMGIVFYHQ 443
                 56777999*************976 PP

  == domain 5  score: 5.1 bits;  conditional E-value: 0.02
      TPR_11   3 ayyeqGkyeeAieaYkkAlkl 23 
                 ++y q k+eeA+  ++kAl +
  KHJ31534.1 439 VFYHQDKLEEAVVMFSKALSI 459
                 7999**************986 PP

  == domain 6  score: 6.2 bits;  conditional E-value: 0.0085
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 G+ay+ + +++eA+ ++++ l+    +a ++++ Gl+++
  KHJ31534.1 478 GHAYRRLYRLDEALVEFNQVLREGGRDAAVFCAKGLVLM 516
                 899*****************9977777777777777765 PP

  == domain 7  score: 5.5 bits;  conditional E-value: 0.015
      TPR_11  12 eAieaYkkAlkldPdnaea 30 
                 eAi+ + +Al+++P+++ a
  KHJ31534.1 523 EAINIFHEALAISPQDPIA 541
                 899999***********87 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0     0.029        27       4      24 ..      39      59 ..      38      60 .. 0.90
   2 ?    5.0   0.1     0.049        46       3      23 ..      71      91 ..      69      93 .. 0.89
   3 !    8.0   0.1     0.005       4.8       2      27 ..     148     174 ..     147     176 .. 0.87
   4 ?   -1.1   0.0       4.3     4e+03      10      25 ..     337     353 ..     334     354 .. 0.79
   5 ?    2.6   0.0      0.28   2.7e+02      11      27 ..     373     389 ..     365     392 .. 0.75
   6 ?    1.2   0.0      0.74     7e+02       6      27 ..     436     457 ..     435     460 .. 0.88
   7 ?    4.2   0.0     0.084        80       5      29 ..     476     500 ..     476     500 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.029
                HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6  4 yklalsyrklgdtdkAleale 24
                ++la+ ++++g++++Al  l 
  KHJ31534.1 39 FWLAQVHFSTGNYTRALSFLS 59
                89*******99*****99876 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.049
                HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6  3 lyklalsyrklgdtdkAleal 23
                +y++a +++k+ + d+Al++l
  KHJ31534.1 71 QYLAAHCLIKQAKFDEALAIL 91
                89********88******998 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.005
                 HH.HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 Al.yklalsyrklgdtdkAlealerli 27 
                 A+ ++++l++ k +  d+A+e +++ +
  KHJ31534.1 148 AMcFLRGLCHAKRNAFDRAKECYKDAV 174
                 555899******89*********9887 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 4.3
                 HHH.HHHHHHHHHHHHH CS
       TPR_6  10 yrk.lgdtdkAlealer 25 
                 y+  +++ ++A++++ +
  KHJ31534.1 337 YYLvTNKVSEARRYFSK 353
                 565578999*****976 PP

  == domain 5  score: 2.6 bits;  conditional E-value: 0.28
                 HHHHHHHHHHHHHHHHH CS
       TPR_6  11 rklgdtdkAlealerli 27 
                  + g++d+A+ a+    
  KHJ31534.1 373 AQEGEHDQAISAYSTAA 389
                 4458*********8765 PP

  == domain 6  score: 1.2 bits;  conditional E-value: 0.74
                 HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealerli 27 
                 ++  ++ +++ ++A+ ++ + +
  KHJ31534.1 436 MGIVFYHQDKLEEAVVMFSKAL 457
                 78999***9*******999876 PP

  == domain 7  score: 4.2 bits;  conditional E-value: 0.084
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrklgdtdkAlealerlike 29 
                 +l+ +yr+l + d+Al  ++++++e
  KHJ31534.1 476 NLGHAYRRLYRLDEALVEFNQVLRE 500
                 5899****88************985 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0049       4.6       5      22 ..      41      58 ..      41      64 .. 0.92
   2 ?   -1.2   0.0         3   2.8e+03       6      21 ..      75      90 ..      69      92 .. 0.78
   3 ?    4.3   0.0     0.049        47       5      29 ..     153     175 ..     150     183 .. 0.80
   4 ?   -0.8   0.0       2.2   2.1e+03       2      20 ..     263     281 ..     262     282 .. 0.85
   5 ?    5.4   0.1     0.023        22       6      22 ..     369     385 ..     368     392 .. 0.87
   6 ?   -0.2   0.0       1.4   1.3e+03       2      32 ..     433     463 ..     432     467 .. 0.83
   7 ?    3.8   0.1     0.073        69       3      22 ..     475     494 ..     473     505 .. 0.79
   8 ?    1.2   0.0      0.51   4.8e+02       6      33 ..     512     539 ..     507     542 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0049
       TPR_7  5 LarlysrlGdyeeAiely 22
                La+++++ G+y +A++++
  KHJ31534.1 41 LAQVHFSTGNYTRALSFL 58
                8**************987 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 3
       TPR_7  6 arlysrlGdyeeAiel 21
                a++  ++ +++eA+ +
  KHJ31534.1 75 AHCLIKQAKFDEALAI 90
                667888999***9875 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.049
       TPR_7   5 LarlysrlGdyeeAielyeqsLalt 29 
                  + ++ +++ +++A e+y+   a++
  KHJ31534.1 153 RGLCHAKRNAFDRAKECYKD--AVR 175
                 5778999************9..544 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 2.2
       TPR_7   2 LlnLarlysrlGdyeeAie 20 
                 Ll  a+l + + +++eA++
  KHJ31534.1 263 LLSQADLLFTQCRFKEALS 281
                 6778999999*******87 PP

  == domain 5  score: 5.4 bits;  conditional E-value: 0.023
       TPR_7   6 arlysrlGdyeeAiely 22 
                 a+++ ++G++++Ai+ y
  KHJ31534.1 369 AHTFAQEGEHDQAISAY 385
                 78999**********99 PP

  == domain 6  score: -0.2 bits;  conditional E-value: 1.4
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkdp 32 
                 L+ ++ ++  + + eeA+  + ++L ++++ 
  KHJ31534.1 433 LNEMGIVFYHQDKLEEAVVMFSKALSIADEI 463
                 7889999999999*****9999988887765 PP

  == domain 7  score: 3.8 bits;  conditional E-value: 0.073
       TPR_7   3 lnLarlysrlGdyeeAiely 22 
                 +nL+++y+rl + +eA+  +
  KHJ31534.1 475 SNLGHAYRRLYRLDEALVEF 494
                 69********9999997555 PP

  == domain 8  score: 1.2 bits;  conditional E-value: 0.51
       TPR_7   6 arlysrlGdyeeAielyeqsLaltkdpe 33 
                 + +  +l++  eAi ++ ++La+  ++ 
  KHJ31534.1 512 GLVLMDLRRPFEAINIFHEALAISPQDP 539
                 666677777779*******777665554 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       3.1   2.9e+03       6      51 ..      13      57 ..       9      60 .. 0.71
   2 ?    1.8   0.1      0.29   2.7e+02      35      57 ..     153     175 ..     147     179 .. 0.86
   3 ?    2.1   0.0      0.23   2.2e+02      25      60 ..     324     359 ..     313     390 .. 0.90
   4 ?    2.9   0.0      0.13   1.2e+02      28      60 ..     429     461 ..     425     469 .. 0.85
   5 !    7.5   0.1    0.0049       4.6       6      68 ..     482     544 ..     477     548 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 3.1
       TPR_9  6 ireedweralavverllllaPddpeerrdRGlllaqlGclsaAlad 51
                +++++++ a  + + ll+l  +d  + +  +++++  G++  Al  
  KHJ31534.1 13 LNKHQYDSAVFIGDKLLALTQND-KDAFWLAQVHFSTGNYTRALSF 57
                66677777777777777777777.4445578899999999988865 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.29
       TPR_9  35 RGlllaqlGclsaAladLeayla 57 
                 RGl++a+++++  A ++   +++
  KHJ31534.1 153 RGLCHAKRNAFDRAKECYKDAVR 175
                 9*************999887765 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.23
       TPR_9  25 aPddpeerrdRGlllaqlGclsaAladLeaylalap 60 
                 +Pd+p  ++  G+ +   + +s+A++ +  +  ++p
  KHJ31534.1 324 HPDEPCTWLAVGVYYLVTNKVSEARRYFSKASMMDP 359
                 799************************999887777 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.13
       TPR_9  28 dpeerrdRGlllaqlGclsaAladLeaylalap 60 
                 dp ++ + G++ ++++ l++A+  +  +l++a+
  KHJ31534.1 429 DPLLLNEMGIVFYHQDKLEEAVVMFSKALSIAD 461
                 899999***************998888887664 PP

  == domain 5  score: 7.5 bits;  conditional E-value: 0.0049
       TPR_9   6 ireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapdaeai 68 
                  r  + ++al   + +l    +d+      Gl+l+ l ++ +A++ +  +la++p++p a  +
  KHJ31534.1 482 RRLYRLDEALVEFNQVLREGGRDAAVFCAKGLVLMDLRRPFEAINIFHEALAISPQDPIATEL 544
                 555555666666666666666777777889****************************99866 PP

>> TPR_3  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       1.4   1.4e+03      11      25 ..      45      59 ..      40      59 .. 0.81
   2 ?   -2.9   0.0       8.1   7.6e+03      18      25 ..     345     352 ..     343     357 .. 0.86
   3 ?    5.2   0.1     0.023        22       6      30 ..     367     389 ..     364     392 .. 0.84
   4 ?    6.3   0.0      0.01       9.8       9      25 ..     438     454 ..     434     462 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1.4
                HHHTT-HHHHHHH.. CS
       TPR_3 11 fynkkkyqeArelfs 25
                 ++ ++y+ A+ ++s
  KHJ31534.1 45 HFSTGNYTRALSFLS 59
                5789******99977 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 8.1
                 HHHHHH.. CS
       TPR_3  18 qeArelfs 25 
                 +eAr +fs
  KHJ31534.1 345 SEARRYFS 352
                 69****99 PP

  == domain 3  score: 5.2 bits;  conditional E-value: 0.023
                 HHHHHHHHTT-HHHHHHH..HHHHH CS
       TPR_3   6 syAaefynkkkyqeArelfsYalla 30 
                 ++A +f + ++ ++A+ ++s   +a
  KHJ31534.1 367 GFAHTFAQEGEHDQAISAYS--TAA 389
                 7899**************88..555 PP

  == domain 4  score: 6.3 bits;  conditional E-value: 0.01
                 HHHHHTT-HHHHHHH.. CS
       TPR_3   9 aefynkkkyqeArelfs 25 
                  +fy ++k++eA+  fs
  KHJ31534.1 438 IVFYHQDKLEEAVVMFS 454
                 58*************99 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.036        34     166     208 ..      40      83 ..      32     137 .. 0.78
   2 ?    2.3   0.0     0.091        86      64     108 ..     244     288 ..     215     304 .. 0.80
   3 ?   -0.5   0.1      0.68   6.5e+02      45     118 ..     333     400 ..     321     412 .. 0.64
   4 ?    4.7   0.0     0.018        17      46     107 ..     436     498 ..     431     504 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.036
    TPR_MalT 166 llarialaqGdleeAetllekaeelaresnfh.vdwlanaeevr 208
                  la+++++ G+   A++ l + + + r+s ++ +++++ +++++
  KHJ31534.1  40 WLAQVHFSTGNYTRALSFLSREDLVSRNSSCQyLAAHCLIKQAK 83 
                 58999999999999999999999999999886235566665554 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.091
    TPR_MalT  64 qeaeklarqadslhvallallqqaeilvaqGrLheAletyeqalq 108
                 ++a +++  + +l +    ll+qa++l++q r++eAl + + +lq
  KHJ31534.1 244 KAAAETLSTHYNLSANPDLLLSQADLLFTQCRFKEALSITNSILQ 288
                 4444444445555544445789****************9999987 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.68
    TPR_MalT  45 vlGeasllqGdleaAlqalqeaeklarqadslhvallallqqaeilvaqGrLheAletyeqalqlateqglqql 118
                 ++G  +l+++++ +A++ +++a+++      +h   +a ++ a +  + G+ ++A+  y  a +l   ++l+ql
  KHJ31534.1 333 AVGVYYLVTNKVSEARRYFSKASMMD-----PH-FGPAWIGFAHTFAQEGEHDQAISAYSTAARLFMGTHLPQL 400
                 56777777777777777777777664.....33.3445555555556666666666666666666666666665 PP

  == domain 4  score: 4.7 bits;  conditional E-value: 0.018
    TPR_MalT  46 lGeasllqGdleaAlqalqeaeklarqadslhvallall.qqaeilvaqGrLheAletyeqal 107
                 +G ++ +q +le+A+ ++++a ++a++++s   a ++++  ++  ++   rL+eAl  ++q l
  KHJ31534.1 436 MGIVFYHQDKLEEAVVMFSKALSIADEIESDSLAWVSTRsNLGHAYRRLYRLDEALVEFNQVL 498
                 788888888899999999999888888887766655555467778888888888877777766 PP

>> SRP_TPR_like  Putative TPR-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.022        21      71     102 ..      31      62 ..      11      69 .. 0.80
   2 ?    4.3   0.0     0.042        40      21      41 ..      75      95 ..      63     149 .. 0.73
   3 ?    1.9   0.2      0.24   2.2e+02      27      77 ..     234     292 ..     211     310 .. 0.63
   4 ?   -1.3   0.0       2.3   2.2e+03      58      72 ..     443     457 ..     432     498 .. 0.56

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.022
  SRP_TPR_like  71 veaeekvkvlksqvlYrlgsyekAYklLskek 102
                   +++++k    ++qv +  g+y +A + Ls+e+
    KHJ31534.1  31 LTQNDKDAFWLAQVHFSTGNYTRALSFLSRED 62 
                   45556777889999999999999999999876 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.042
  SRP_TPR_like 21 vvaliklekyeeaLkllkkgs 41
                  + +lik  k++eaL +l +++
    KHJ31534.1 75 AHCLIKQAKFDEALAILGDKN 95
                  457777777777777766555 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.24
  SRP_TPR_like  27 lekyeeaLkllkkgs........alsedvrfEkaYvlYklkkykkalkilkkveaeekv 77 
                   l ky++   + + ++        + + d+   +a  l+   ++k+al+i +++ +e+k 
    KHJ31534.1 234 LSKYKNPKAFKAAAEtlsthynlSANPDLLLSQADLLFTQCRFKEALSITNSILQEDKY 292
                   44454433333333322444433345566666777777777777777777777776665 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 2.3
  SRP_TPR_like  58 lkkykkalkilkkve 72 
                     k+++a+ +++k+ 
    KHJ31534.1 443 QDKLEEAVVMFSKAL 457
                   333333333333322 PP

>> TPR_5  Tetratrico peptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       3.3   3.2e+03      76      97 ..      70      91 ..      41     107 .. 0.80
   2 ?   12.7   0.0   0.00012      0.11      45     102 ..     478     533 ..     442     536 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 3.3
       TPR_5 76 laaflaLvLsdlgrereavsiv 97
                 + ++a +L+++ +  ea++i+
  KHJ31534.1 70 CQYLAAHCLIKQAKFDEALAIL 91
                5667888999999999999875 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00012
       TPR_5  45 assLRnlGeaeealaLLraeleapsdelddalaaflaLvLsdlgrereavsivllala 102
                   + R l +++eal   ++ l  ++ + d+a+ +   LvL+dl r+ ea++i  +ala
  KHJ31534.1 478 GHAYRRLYRLDEALVEFNQVL--REGGRDAAVFCAKGLVLMDLRRPFEAINIFHEALA 533
                 334455555555555444444..4456789**********************999998 PP

>> PWI  PWI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   0.00014      0.14      33      71 ..     195     240 ..     178     241 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00014
         PWI  33 e.......keldpkklqinltgfLekeaekFvkeLWelllsaqsse 71 
                 +        +ld ++++ +  +f+ +ea++F+k L+ + ls+ +++
  KHJ31534.1 195 PdeeweflASLDFDSITVSTDTFISQEAAEFTKTLYTTRLSKYKNP 240
                 14445666789**************************999998887 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.67   6.3e+02      18      32 ..     161     175 ..     157     191 .. 0.81
   2 ?    6.0   0.0     0.013        12      16      35 ..     374     393 ..     369     396 .. 0.90
   3 ?   -0.4   0.0       1.3   1.2e+03      29      54 ..     523     550 ..     523     554 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.67
         MIT  18 gnyeeAlelYkeale 32 
                 + ++ A e+Yk+a++
  KHJ31534.1 161 NAFDRAKECYKDAVR 175
                 667889999999986 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.013
         MIT  16 nagnyeeAlelYkealelLl 35 
                 ++g+ + A+++Y++a +l++
  KHJ31534.1 374 QEGEHDQAISAYSTAARLFM 393
                 799****************8 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 1.3
         MIT  29 ealelLlqalk.e.kneerrellrekie 54 
                 ea++++++al+   +++   ell + +e
  KHJ31534.1 523 EAINIFHEALAiSpQDPIATELLNKVLE 550
                 6999999999977888888888776555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (565 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       549  (0.0306208); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 3779.06
//
Query:       KHJ31535.1  [L=278]
Description: putative mrna splicing protein yju2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-71  241.4  10.7    2.2e-71  241.2  10.7    1.0  1  DUF572     Family of unknown function (DUF572)
  ------ inclusion threshold ------
       0.57    9.9   8.5        0.9    9.2   8.5    1.3  1  Use1       Membrane fusion protein Use1
       0.87    9.9   5.3          8    6.8   1.5    2.8  2  RNA_pol_N  RNA polymerases N / 8 kDa subunit
        1.6    8.8   4.7        3.1    7.8   0.3    2.3  2  zf-FCS     MYM-type Zinc finger with FCS sequence motif
        3.1    7.7   4.6        4.2    7.2   4.6    1.1  1  DUF4661    Domain of unknown function (DUF4661)
          5    7.6  10.6         11    6.6  10.6    1.5  1  Latarcin   Latarcin precursor


Domain annotation for each model (and alignments):
>> DUF572  Family of unknown function (DUF572)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.2  10.7   7.2e-75   2.2e-71       1     217 [.       9     224 ..       9     275 .. 0.78

  Alignments for each domain:
  == domain 1  score: 241.2 bits;  conditional E-value: 7.2e-75
      DUF572   1 kYyPPDfdpskipalrekarlkn...rqlvvRlmaPfnmrCktCgeyIykGvkFNarKekVgnetYlgipIfrFyikCtrClneitfkTDPkntdYvve 96 
                 kYyPPDfdpski   r +++ k+   ++ +vRlmaPf m+C+tCgeyIykG+kFNarKe+ + e+Y++i I+rFyi+CtrC++eitfkTDPkn dY++e
  KHJ31535.1   9 KYYPPDFDPSKIV--RTRGP-KQagpKVQTVRLMAPFPMKCTTCGEYIYKGRKFNARKETTE-EKYYSISIYRFYIRCTRCSGEITFKTDPKNMDYECE 103
                 9************..99999.655669********************************665.5*********************************** PP

      DUF572  97 eGatRnfkaek.....leeeeakreekekeeeeaedamkklEkrtkdskkemealesLeeLqelnqrqakvdfdanlelrk.efreekkereeeeedee 189
                  Ga+Rn ++++      +e +++r  + ++eee+++am++lE +t d k+e+++  +L+e++  n+r+++v++d   +l+  e+ +e ++r+++e dee
  KHJ31535.1 104 RGAKRNTEPWRmngggKQESDEERLDRLEREEEEKNAMQELESKTLDTKREIAVADALDEIRTRNARNERVGKDGREALVVqESIDEARRRQDQE-DEE 201
                 ***************9445555688888888888****************************************988877636667777777777.999 PP

      DUF572 190 alkekislekikllpedeedekkaklle 217
                 a ++++ ++  k l+e   d    + +e
  KHJ31535.1 202 AARQAF-MRYHKGLEEVIVD----EIVE 224
                 999888.3233333332211....2222 PP

>> Use1  Membrane fusion protein Use1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   8.5    0.0003       0.9      80     170 ..     135     224 ..     118     241 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0003
        Use1  80 alanqllapgeeskeekeeskereeaskelrqke..kakyqkelrkellgkndsssspekekeskkkksdedldavlkkhenlqEklaeemls 170
                   +++++++ e+++ +++ + + ++a+ e+r ++  ++++ k+ r+ l+ +++ +++++   ++ +++++++ +a +++h+ l+E + +e+++
  KHJ31535.1 135 EEEKNAMQELESKTLDTKREIAVADALDEIRTRNarNERVGKDGREALVVQESIDEARR---RQDQEDEEAARQAFMRYHKGLEEVIVDEIVE 224
                 22222233334445566666667788888887752267889999**9998888665554...3344489999******************985 PP

>> RNA_pol_N  RNA polymerases N / 8 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   1.5    0.0027         8       3      29 ..      42      67 ..      41      87 .. 0.72
   2 ?    3.7   0.1     0.026        77      19      43 ..     125     149 ..     119     164 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0027
                --SS-TTT--B-STHHHHHHHHHHTT- CS
   RNA_pol_N  3 iPVrCFtCGkvigekweeylellekge 29
                +P++C tCG+ i +  ++++++ e+ e
  KHJ31535.1 42 FPMKCTTCGEYIYK-GRKFNARKETTE 67
                69**********65.444444444443 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.026
                 HHHHHHHHTT--HHHHHHHHT--SH CS
   RNA_pol_N  19 eeylellekgeepkdaLdaLglkry 43 
                 ee l +le +ee+k+a+++L+ k  
  KHJ31535.1 125 EERLDRLEREEEEKNAMQELESKTL 149
                 566789999***********98865 PP

>> zf-FCS  MYM-type Zinc finger with FCS sequence motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.3     0.001       3.1       5      20 ..      45      60 ..      44      70 .. 0.82
   2 ?    2.2   0.5     0.058   1.7e+02       5      18 ..      81      94 ..      80     103 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.001
      zf-FCS  5 rCwfCkkyikgkpeft 20
                +C++C++yi+ + +f+
  KHJ31535.1 45 KCTTCGEYIYKGRKFN 60
                7********8776665 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.058
      zf-FCS  5 rCwfCkkyikgkpe 18
                rC+ C+ +i++k++
  KHJ31535.1 81 RCTRCSGEITFKTD 94
                8**********997 PP

>> DUF4661  Domain of unknown function (DUF4661)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   4.6    0.0014       4.2      49     163 ..     103     217 ..      89     222 .. 0.56

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0014
     DUF4661  49 rrssgaapelsres..kveqlgsk...rmdslkldkavssteesgrleargaipklg.sdpvdskgskregvsleeelsasgpeapvekpgrrqkllgW 141
                 +r ++  +e+ r     +++++++   r +  + +k++ +  es+ l++++ i+  +  d++ ++++++e+v  + + +    e      + ++   + 
  KHJ31535.1 103 ERGAKRNTEPWRMNggGKQESDEErldRLEREEEEKNAMQELESKTLDTKREIAVADaLDEIRTRNARNERVGKDGREALVVQE------SIDEARRRQ 195
                 444444444433332322333333000344455667777788899999999988554235555666666555555555544444......444444444 PP

     DUF4661 142 lrgesgrglgappqylggpeel 163
                  + + +   +a ++y +g ee+
  KHJ31535.1 196 DQEDEEAARQAFMRYHKGLEEV 217
                 5777777788888888888886 PP

>> Latarcin  Latarcin precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6  10.6    0.0035        11      11      68 ..     125     212 ..     120     221 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0035
    Latarcin  11 aeeLdelergainrklmemvnnlRkvqgR..............................LeemvenlrkvedledtEEARgafkklkd 68 
                 +e Ld ler++  ++ m+ +     + +R                               +e +++ r+++d ed E AR+af    +
  KHJ31535.1 125 EERLDRLEREEEEKNAMQELESKTLDTKReiavadaldeirtrnarnervgkdgrealvVQESIDEARRRQDQEDEEAARQAFMRYHK 212
                 5556666655555555555555555555566666666666666666***********************************7766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1247  (0.0695521); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 1943.36
//
Query:       KHJ31536.1  [L=411]
Description: putative impact family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-29  100.6   0.0    1.7e-28   99.1   0.0    1.8  1  UPF0029   Uncharacterized protein family UPF0029
    2.9e-06   27.5   0.0    1.2e-05   25.6   0.0    2.0  1  RWD       RWD domain
  ------ inclusion threshold ------
      0.025   14.0   0.0      0.043   13.3   0.0    1.3  1  DUF3878   Domain of unknown function, E. rectale Gene descrip
      0.074   12.9   0.0       0.17   11.7   0.0    1.5  1  DUF4132   Domain of unknown function (DUF4132)


Domain annotation for each model (and alignments):
>> UPF0029  Uncharacterized protein family UPF0029
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.1   0.0   3.7e-32   1.7e-28       2     105 .]     259     398 ..     258     398 .. 0.95

  Alignments for each domain:
  == domain 1  score: 99.1 bits;  conditional E-value: 3.7e-32
                 TEEEEEEEEE-SSHHHHHHHHHHH--..TT.....SSEEEEEE....EE...................................TTEE-TTSSTSHHHH CS
     UPF0029   2 kSrFiavlaaveseeevkaileelkkenkk.....athniyAyrlrqkvek...............................vnedsdddgEpaAGkkl 64 
                 kS F+a+++ ++  ++v ++ + l++++ k     athni+A+r+r   ++                               ++ed+dddgE+aAG +l
  KHJ31536.1 259 KSLFLAHCTFIHFVNDVARFRNLLLEHEDKkklnsATHNIMAWRIRYHDGDnngivvhrqekksiianstskfknlnphrykIDEDYDDDGESAAGARL 357
                 89*****************9998877666578999********9999988799*************************99999999************* PP

                 HHHHHHTTB-SEEEEEEEE--SS--HHHHHHHHHHHHHHHH CS
     UPF0029  65 lelLekeklenvlvvvtRwfGGikLGpgrlraiseaareaL 105
                 l+l++ ++++nvlv+v+Rw+GG++LGp+r+ +i+++ar+a+
  KHJ31536.1 358 LHLMRLMDVWNVLVIVSRWYGGVNLGPRRFAIINSVARDAI 398
                 **************************************996 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   2.6e-09   1.2e-05       2     114 ..      16     146 ..      15     147 .. 0.81

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 2.6e-09
                 HHHHHHHHHHHHSTTTC...CCCHT--EE--S-EEEEEEECECCCC....TT-CEEEEEEEEE-SSTT.........................SS--EE CS
                 xxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........................xxxxxx RF
         RWD   2 eqeqEleaLesIypdef...evienenysikleikikldededeedsefeekkkpslkleiklpeeYP.........................eeaPii 72 
                    +E+ a++sIy+++     vi+n++ +     +i + + +             ++ l+ik++++YP                          ++Pi 
  KHJ31536.1  16 TLRDEIIAINSIYGQDTirpMVIDNKQKE----KNIYILHLPH-----------LRIWLQIKFSPNYPyccdndeqqkddeqgsnddrstqvmVVPPIR 99 
                 5679************9766555566666....4444444433...........469*****************************9999995555544 PP

                 EEEECC....SS-HHHHHHHHHHHHHHHHHT..TTS--CHHHHHHHHH CS
                 xxxxxx....xxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxx RF
         RWD  73 slsste....nlpkeqvksleekleelaeen..lgepvifalidwlke 114
                 +l + +     + k + +++++k e+la +   +g++++f+++++l +
  KHJ31536.1 100 ALGT-HgcgsMVRKGDATQICQKFEQLARQLyrPGDVCLFDIMEELMN 146
                 4544.45898889*****************9*************9976 PP

>> DUF3878  Domain of unknown function, E. rectale Gene description (DUF3878)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   9.5e-06     0.043     149     273 ..      61     189 ..      38     201 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 9.5e-06
     DUF3878 149 lefaPfrsyspveedledv.....fdareeGveameelakevgdkdylkllerykkkptrklekelsrkLkskkraklyeliykkvveasdeypqrdyG 242
                 ++f+P + y + ++++++       d+r + v ++   ++ +g ++  +++++  ++   ++ ++l+r+L  +  + l++++ +++ + s++ ++ +y 
  KHJ31536.1  61 IKFSPNYPYCCDNDEQQKDdeqgsNDDRSTQVMVV-PPIRALGTHGCGSMVRKGDATQICQKFEQLARQLYRPGDVCLFDIMEELMNNGSSDCKSNEYS 158
                 77888888877766653320011122233333222.235778888888899998877766666689********************************* PP

     DUF3878 243 erinlkikekrkelekkllekGfvGkyPefs 273
                 +r +++ik+     ek++ ++ f  k  +fs
  KHJ31536.1 159 NRNENNIKSLLSSKEKEFPSDDFSTKQTSFS 189
                 *********9999999999998888877776 PP

>> DUF4132  Domain of unknown function (DUF4132)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   3.7e-05      0.17     103     147 ..      87     132 ..      54     135 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 3.7e-05
     DUF4132 103 kedakvrlaHPvel.eaeelaawqelladyeivQpfkQlfRevyvl 147
                 +  ++v ++ P+++ ++     + +   + +i+Q+f+Ql R++y++
  KHJ31536.1  87 DRSTQVMVVPPIRAlGTHGCGSMVRKGDATQICQKFEQLARQLYRP 132
                 33468999999998888888888888999***************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1612  (0.0899102); expected 358.6 (0.02)
Passed bias filter:                      571  (0.0318478); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 3131.47
//
Query:       KHJ31537.1  [L=379]
Description: putative c6 zinc finger domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.08   13.6   0.3       0.13   13.0   0.3    1.2  1  cwf18     cwf18 pre-mRNA splicing factor


Domain annotation for each model (and alignments):
>> cwf18  cwf18 pre-mRNA splicing factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3     7e-06      0.13      50     124 ..      32     101 ..      24     103 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 7e-06
       cwf18  50 nYdpeteglklgfeappklaketveeqaaeleeeakeeaeeskeidlfnlapkkpnwDLKRdlakklekLerrTq 124
                 n++p +  ++++f+ +p+ + +tv++q++e+++++ +        + + l+ +++n DL+++ ++ + +   +Tq
  KHJ31537.1  32 NFNPVSSLPESKFVREPSTKLRTVQHQIEEIQHQSVS---I--TRENTRLNQRNVNLDLEKNSNQVVTVAPSKTQ 101
                 99999999***********9*************9999...3..334599***********999988888777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       891  (0.049696); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.37
# Mc/sec: 3077.66
//
Query:       KHJ31538.1  [L=152]
Description: hypothetical protein EV44_g4108 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-12   47.2   0.0    2.3e-12   47.1   0.0    1.0  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
       0.11   12.4   0.0        0.3   10.9   0.0    1.7  1  DUF3126   Protein of unknown function (DUF3126)


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.0   2.6e-16   2.3e-12     114     241 ..       2     129 ..       1     130 [. 0.94

  Alignments for each domain:
  == domain 1  score: 47.1 bits;  conditional E-value: 2.6e-16
       RVT_2 114 kLnkslyGlkqapllWnekidkvLkklgferseaesGlyvrgtgegklivalyvddlliagsdikiledvkkelakkfklkdlgkvskfLGieiaq..e 210
                 kL +  y lkq++ + +ek+  ++ k gf++  + + +yv +  + k+i+   vdd+l+ g++ + ++ + k l+ +  l+dlg++s fL + i +   
  KHJ31538.1   2 KLINPQYELKQSGNCLQEKLRLIVIKNGFSPLISDNAIYVIQ--KVKIIMVSCVDDFLLMGTNWNDIQALTKCLNDEVALNDLGDASWFLRVRIRRssP 98 
                 566678**********************************88..78999999******************************************99545 PP

       RVT_2 211 aggiklsladyiakvvkkfeltdaktvatPl 241
                 +g + l +++y+ + +++  +   k+ +tP+
  KHJ31538.1  99 TGSVILDQQQYLRRSLEHLRIDIDKKPKTPM 129
                 89*****************999999999998 PP

>> DUF3126  Protein of unknown function (DUF3126)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   3.3e-05       0.3       6      29 ..     107     130 ..     106     132 .. 0.95

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 3.3e-05
     DUF3126   6 qayLrrtfgneklkvkarpkkdds 29 
                 q+yLrr++++ ++++ ++pk+++s
  KHJ31538.1 107 QQYLRRSLEHLRIDIDKKPKTPMS 130
                 89******************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       413  (0.0230353); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1221.14
//
Query:       KHJ31539.1  [L=215]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-06   26.7   2.4    3.8e-06   26.7   2.4    1.9  2  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   2.4   2.1e-10   3.8e-06       2      17 ..      39      54 ..      38      55 .. 0.93
   2 ?   -5.2   1.9         1   1.8e+04       6       7 ..      59      60 ..      58      62 .. 0.53

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 2.1e-10
                CTSSSSSSSSTTTTST CS
     zf-CCHC  2 kCynCGepGHiardCp 17
                +CynC++ GHia++C+
  KHJ31539.1 39 QCYNCQKYGHIAKNCS 54
                7**************6 PP

  == domain 2  score: -5.2 bits;  conditional E-value: 1
                SS CS
     zf-CCHC  6 CG 7 
                CG
  KHJ31539.1 59 CG 60
                55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      262  (0.0146132); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.20s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 1807.44
//
Query:       KHJ31540.1  [L=143]
Description: putative 40s ribosomal protein s16 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-33  116.2   0.1    1.4e-33  116.0   0.1    1.0  1  Ribosomal_S9  Ribosomal protein S9/S16


Domain annotation for each model (and alignments):
>> Ribosomal_S9  Ribosomal protein S9/S16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.0   0.1   7.8e-38   1.4e-33       1     121 []      11     143 .]      11     143 .] 0.92

  Alignments for each domain:
  == domain 1  score: 116.0 bits;  conditional E-value: 7.8e-38
                   EECTTEEEEEEEEESSSEEEETTEECCHHSTTSCHHHHHCHHHHHTTTSS..SEEEEEEEESS-HHHHHHHHHHHHHHHHHHHHH.....HHHHHHC CS
  Ribosomal_S9   1 GrrKesvArvwikegkgkilvngksleeYfkeeaarekvleplkltgllg..kfdvfvkvkgGGlsgqaeAirlgiaraLvalek.....eekkeLk 90 
                   G++K+++A +++k+gkg i+vngk+l+  ++ e  r kv+ep+ ++gl +   +d++v+v+gGG+++q++Air++i++ +va+++     ++k+eLk
    KHJ31540.1  11 GKKKTATAVAHCKAGKGLIKVNGKPLHL-VQPEILRFKVYEPILIVGLDKfaDVDIRVRVTGGGHVSQVYAIRQAISKSIVAYYQkfvdeHSKNELK 106
                   89**************************.877***************988767******************************98788753377777 PP

                   ......TCCCTS-B--------TTSSCTTB----S-- CS
  Ribosomal_S9  91 ......kaglltrDpRvvErkKtgkkkARkkyqwskR 121
                         +++ll++D+R++E+kK+g ++AR++yq+s+R
    KHJ31540.1 107 rslvlyDRTLLVADNRRCEPKKFGGPGARARYQKSYR 143
                   6666779****************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.35
# Mc/sec: 1226.35
//
Query:       KHJ31541.1  [L=151]
Description: putative 40s ribosomal protein s14 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-45  153.7   1.4    2.5e-45  153.4   1.4    1.1  1  Ribosomal_S11  Ribosomal protein S11
  ------ inclusion threshold ------
      0.069   13.4   0.1       0.15   12.3   0.0    1.6  2  CBM_25         Carbohydrate binding domain (family 25)
       0.09   12.5   0.0       0.12   12.1   0.0    1.3  1  Pilus_CpaD     Pilus biogenesis CpaD protein (pilus_cpaD)


Domain annotation for each model (and alignments):
>> Ribosomal_S11  Ribosomal protein S11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.4   1.4   4.2e-49   2.5e-45       3     110 .]      31     147 ..      29     147 .. 0.99

  Alignments for each domain:
  == domain 1  score: 153.4 bits;  conditional E-value: 4.2e-49
  Ribosomal_S11   3 ahiqasfnntiititdlkGaevlvksaGglgvkasr.kssPyaaqlaaekaaekvldkGikavevkvkg........pGpGreaalralaraGlki 89 
                    a+i+asfn+t+++itdl+G+e++++ +Gg++vka+r +ssPyaa+laa+++a ++++ Gi+a+++k+++        pGpG+++alralar+G+ki
     KHJ31541.1  31 ARIFASFNDTFVHITDLSGRETITRVTGGMKVKADRdESSPYAAMLAAQDVAARCKELGINALHIKIRAtggngtktPGPGAQSALRALARSGMKI 126
                    89********************************************************************************************** PP

  Ribosomal_S11  90 griedvtPiPhdgirrpkkrr 110
                    griedvtP+P d++rr+++rr
     KHJ31541.1 127 GRIEDVTPTPSDSTRRKGGRR 147
                    ******************998 PP

>> CBM_25  Carbohydrate binding domain (family 25)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.95   5.7e+03      61      66 ..      35      40 ..      25      69 .. 0.57
   2 ?   12.3   0.0   2.6e-05      0.15      12      59 ..      85     132 ..      78     142 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.95
      CBM_25 61 aafndG 66
                a+fnd 
  KHJ31541.1 35 ASFNDT 40
                444443 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 2.6e-05
      CBM_25  12 trkkGftsayihyrpaGGswtavpGvkmrdaeaGyakkdvdlGaassl 59 
                 ++++G ++ +i+ r +GG  t +pG + ++a    a+  + +G   ++
  KHJ31541.1  85 CKELGINALHIKIRATGGNGTKTPGPGAQSALRALARSGMKIGRIEDV 132
                 5789***************************99999999999976665 PP

>> Pilus_CpaD  Pilus biogenesis CpaD protein (pilus_cpaD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.9e-05      0.12      71     124 ..      55     108 ..      47     141 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.9e-05
  Pilus_CpaD  71 egagaivisvpsgssneaaaaaaaaeiravlaaaGvpaseisvrayqaaapeda 124
                 + +g + +++ +++s++ aa+ aa++++a  ++ G++a +i++ra+ ++ +++ 
  KHJ31541.1  55 RVTGGMKVKADRDESSPYAAMLAAQDVAARCKELGINALHIKIRATGGNGTKTP 108
                 567889999999*********************************999887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.20s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 1251.55
//
Query:       KHJ31542.1  [L=427]
Description: putative prephenate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.7e-15   54.8   0.0    9.9e-15   54.2   0.0    1.2  1  PDH            Prephenate dehydrogenase
    3.3e-07   30.6   0.0    5.5e-07   29.9   0.0    1.4  1  NAD_binding_2  NAD binding domain of 6-phosphogluconate dehyd
    3.5e-07   30.7   0.0      7e-07   29.8   0.0    1.5  1  F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
    0.00033   20.3   0.0    0.00064   19.4   0.0    1.6  1  ApbA           Ketopantoate reductase PanE/ApbA
    0.00047   19.6   0.0    0.00082   18.8   0.0    1.4  1  2-Hacid_dh_C   D-isomer specific 2-hydroxyacid dehydrogenase,
     0.0023   17.8   0.0     0.0043   17.0   0.0    1.5  1  3HCDH_N        3-hydroxyacyl-CoA dehydrogenase, NAD binding d
  ------ inclusion threshold ------
      0.012   16.2   0.0      0.032   14.8   0.0    1.7  1  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase
      0.026   14.6   0.0      0.048   13.7   0.0    1.4  1  Shikimate_DH   Shikimate / quinate 5-dehydrogenase
      0.046   14.0   0.0      0.095   13.0   0.0    1.5  1  TrkA_N         TrkA-N domain


Domain annotation for each model (and alignments):
>> PDH  Prephenate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.2   0.0     5e-18   9.9e-15      41     244 ..      58     255 ..      19     268 .. 0.88

  Alignments for each domain:
  == domain 1  score: 54.2 bits;  conditional E-value: 5e-18
                 GGGCCG.SEEEE-S-GGGHHHHHHHHHHHS-TT-EEEE--S--CHHHHHHHHHCC..GCEEEEEES---S-SSGGG--TTTTTT-EEEEEE-TTS-HHH CS
         PDH  41 eavkea.divvlavPvevilevlkelaphlkedalitDvgsvKekvvreleellkegksfvgghPmaGteksGvdaareelfenavviLtPtektdkea 138
                 + v+ a d ++ +v  e++++++    p  k++a++  ++s K+  + + e++l+e + +++ h + G+         +   ++++ ++    +++ e 
  KHJ31542.1  58 HLVSRAsDYIIYSVEAEAVERIVSLYGPSTKQGAIVGGQTSCKAPEIAAFEKHLPEDVDIISCHSLHGP---------KIDTQGQPLVIIKHRASE-EN 146
                 45666669*************************************************************.........555689999999888666.9* PP

                 HHHHHHHHHHCT-EEEE--HHHHHHHHHHHTHHHHHHHHHHHHHHHCHHCCCCHHHHCGTCCHHHHH....CGGGS-HHHHHHHHHHTHHHHHHHHHHH CS
         PDH 139 lekvkelleevgarvilmspeeHDrvvavvshlphvvaialaatlkekkndekeirklasggfrdvt....RiaksnPelwadilleNkeavlealdkf 233
                 ++kv +++   +  ++++s+ eHDr++a ++ ++h+++ ++ ++ +++k+   e+ ++ +g+ +  +    Ri ++   ++a +++ N +   e++ ++
  KHJ31542.1 147 FKKVTHVFSCFKSTLVYLSAIEHDRITADTQAVTHAAFLSMGKAWHANKQFPWESARYVGGIENVKInltlRIYSQKWHVYAGLAILNPY-AREQIRQY 244
                 ************************************************************98655445556*******************.99****** PP

                 HHHHHHHHHHH CS
         PDH 234 ikelkklkeli 244
                 ++++++l +l+
  KHJ31542.1 245 AQSVTELYKLM 255
                 *****998876 PP

>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0   2.8e-10   5.5e-07       2     102 ..       6     109 ..       5     163 .. 0.76

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 2.8e-10
                    EEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT.....EEE-SSHHHHHHHCSEEEE-SSSHHHHHHHHHSHCCC--TT-EEEE-S-- CS
  NAD_binding_2   2 igfiGlGvMGsnmalnllkagykvavynrtkekveelvaeg.....akaaesieelvasldvvitmvkagkavdeviegllealkkgdilidgsts 92 
                    ig+iG+G+MG   a++l +ag++v + +r+ ek+e l ++      +k++ +   + ++ d +i  v+a +av+ +++   ++ k+g+i+   ++ 
     KHJ31542.1   6 IGIIGMGNMGVMYAQRLSAAGWRVNACDRE-EKFEVLQEKFadnanVKVFPNGHLVSRASDYIIYSVEA-EAVERIVSLYGPSTKQGAIVGGQTSC 99 
                    8***************************99.55554444433334566666655555555*******98.68999888888888888887766666 PP

                    -HHHHHHHHH CS
  NAD_binding_2  93 spedtrelak 102
                    ++ +   ++k
     KHJ31542.1 100 KAPEIAAFEK 109
                    6666555555 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.0   3.5e-10     7e-07       2      91 ..       6      93 ..       5      93 .. 0.81

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 3.5e-10
                   EEEETTSHHHHHHHHHHHHTTS-GGCEEEEEESSCCCHHHHHHHHC..-EEECECHHHHHH.H-SEEEE-S-HHHHHHHHHHCGHHHHTTSEE CS
  F420_oxidored  2 igiiGaGnmgealasgllaagaqpheivvansrnpekaeelaeelg..vkvtavdneeaae.eadvvvlavkpedveevlselakdalkgklv 91
                   igiiG+Gnmg   a++l+aag     +  a++r++ k e l+e++   ++v+  +n  +++  +d ++ +v  e+ve ++s   +++++g +v
     KHJ31542.1  6 IGIIGMGNMGVMYAQRLSAAG---WRVN-ACDREE-KFEVLQEKFAdnANVKVFPNGHLVSrASDYIIYSVEAEAVERIVSLYGPSTKQGAIV 93
                   9********************...9999.988765.5666666666664445555777776599****************9998888888776 PP

>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   3.2e-07   0.00064       1      39 [.       6      44 ..       6      94 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 3.2e-07
                EEEES-SHHHHHHHHHHHHHTHCEEEE-SCHHHHHHHHH CS
        ApbA  1 iailGaGaiGsllaakLakagadvtlilrsrrlealkkn 39
                i i+G+G +G ++a +L++ag+ v  ++r++++e l+++
  KHJ31542.1  6 IGIIGMGNMGVMYAQRLSAAGWRVNACDREEKFEVLQEK 44
                79****************************988877665 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   4.1e-07   0.00082      39      75 ..       6      46 ..       1      78 [. 0.70

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 4.1e-07
                  EEEES-SHHHHHHHHHHHHTT-EEEEESSSHHHHH....CH CS
  2-Hacid_dh_C 39 vGiiGlGrIGqavakrlkafgmkviaydrskkkee....ee 75
                  +GiiG+G++G   a+rl+a g +v a dr +k e      +
    KHJ31542.1  6 IGIIGMGNMGVMYAQRLSAAGWRVNACDREEKFEVlqekFA 46
                  8*****************************98554322122 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   2.2e-06    0.0043       2      35 ..       6      39 ..       5      81 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 2.2e-06
                EEEE--SCCHHHHHHHHHHTT-EEEEE-S-HHHH CS
     3HCDH_N  2 vaviGaGtmGagiaavfasagleVvlvdiseeal 35
                +++iG G mG   a+ + +ag +V+ +d++e++ 
  KHJ31542.1  6 IGIIGMGNMGVMYAQRLSAAGWRVNACDREEKFE 39
                79**************************988764 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.6e-05     0.032       3      60 ..       7      56 ..       6      65 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.6e-05
                EEECSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHT.TEEEECS CS
   Pyr_redox  3 vvvGgGyiglElAgalaelgkkVtvversdkllrllDeeaskilqeklekn.gievlln 60
                 ++G G+ g+++A+ l++ g +V  ++r++k+          +lqek+ +n +++v  n
  KHJ31542.1  7 GIIGMGNMGVMYAQRLSAAGWRVNACDREEKFE---------VLQEKFADNaNVKVFPN 56
                69******************************9.........78888877777777766 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.4e-05     0.048      15      86 ..       6      74 ..       1      80 [. 0.89

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.4e-05
                  EEEES-SHHHHHHHHHHHCCT-CEEEEEESSHHHHHHHHHHHT.ET-EEEEGCGHHHHHHT-SEEEE-SSSS CS
  Shikimate_DH 15 vlliGaGemaelvakhLlakgvkkvvvaNRtlerakelaeelkgeeiealkleelkellaeadvvisatase 86
                  + +iG G+m+   a+ L+a+g + v    R+ e+ + l e++ ++ ++++ + + + + +++d +i ++ +e
    KHJ31542.1  6 IGIIGMGNMGVMYAQRLSAAGWR-VNACDRE-EKFEVLQEKFADN-ANVKVFPNGHLVSRASDYIIYSVEAE 74
                  679********************.9999995.89********655.99999999999999999999999887 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   4.8e-05     0.095       3      41 ..       8      45 ..       6      54 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 4.8e-05
                EES-SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHTT CS
      TrkA_N  3 iiGlGrvGrslaeeLseggkdvvvidkdeerveelreeg 41
                iiG+G++G   a++Ls++g++v + d++ e++e l+e++
  KHJ31542.1  8 IIGMGNMGVMYAQRLSAAGWRVNACDRE-EKFEVLQEKF 45
                9****************8889*****95.6777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       591  (0.0329634); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 3246.72
//
Query:       KHJ31543.1  [L=260]
Description: putative eap30 vps36 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-72  243.1   0.0    2.6e-72  242.9   0.0    1.0  1  EAP30     EAP30/Vps36 family


Domain annotation for each model (and alignments):
>> EAP30  EAP30/Vps36 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.9   0.0   1.5e-76   2.6e-72       1     236 []       6     237 ..       6     237 .. 0.96

  Alignments for each domain:
  == domain 1  score: 242.9 bits;  conditional E-value: 1.5e-76
       EAP30   1 vGiaglqrreqtaaeyqdlgaellaealqdleallakfkesLvklaekhkakiksdpafraqftkmcaslGvdpl.ssk....kseslgfl.ellg..l 91 
                 vG+++++r++ t+a+y+++g+++ + + + l ++l++f++ L++++++h+++i+s+p+fra+f++mc +lG+dpl ss+    k+ + +f+ +llg  +
  KHJ31543.1   6 VGLGAFDRSRITSAQYASHGNSIRNAHSTTLATQLSVFRSLLQQFSQTHAKEIRSNPHFRAEFARMCTTLGIDPLaSSSgvgrKDAGGSFWaQLLGgsV 104
                 79*************************************************************************6555899966666799*999999* PP

       EAP30  92 gdfyyeLavqivevclatraengglisleelyalvnrarggv.alvspdDllraiekllvlgsglsvlqvggkkvvrSvptelntdqvevlevakrlvs 189
                 +dfy+eLav++vevc atr+enggli   el ++++ +r    a+++ dD+lra+e+l++lgs +s l+vg+k+++rSvp+elntdq++vlev++ l  
  KHJ31543.1 105 NDFYFELAVRVVEVCGATREENGGLIGSNELRQRIMSTRMEGgAEITDDDILRAVETLKPLGSSYSTLKVGHKTYIRSVPKELNTDQSAVLEVVQLL-- 201
                 *************************************9988889*****************************************************.. PP

       EAP30 190 llaekssgggvtaselaeeeenlgwsvarakeaLeelereGllwvDd 236
                        g +vt s+l   + nl+w++arak+ +++l++eG+lwvD+
  KHJ31543.1 202 -------G-YVTLSML---MINLQWTRARAKTSIKDLTSEGMLWVDK 237
                 .......5.*******...999************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       602  (0.0335769); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2031.08
//
Query:       KHJ31544.1  [L=134]
Description: hypothetical protein EV44_g3812 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      190  (0.0105974); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 995.58
//
Query:       KHJ31545.1  [L=175]
Description: hypothetical protein EV44_g1319 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-07   31.9   0.1      1e-07   31.9   0.1    2.2  2  KIX_2     KIX domain


Domain annotation for each model (and alignments):
>> KIX_2  KIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   1.3     0.088   1.6e+03      64      79 ..      16      31 ..      13      34 .. 0.61
   2 !   31.9   0.1   5.6e-12     1e-07       3      81 ..      55     134 ..      53     135 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.088
       KIX_2 64 islKmlqmetksqnaa 79
                is+ m+q ++++++++
  KHJ31545.1 16 ISQQMAQQQQQQRAQQ 31
                6666666665555555 PP

  == domain 2  score: 31.9 bits;  conditional E-value: 5.6e-12
       KIX_2   3 dwratlspeeRqkivnkiletLkk.hlpvsgpeglnelkkiAvrFEekiFskAtskedYlrkislKmlqmetksqnaass 81 
                  wra    +eR   +  i+++L++ +   s   +++++ ++A + E    ++A +ke Y + i+ K+ q+++k+++++s+
  KHJ31545.1  55 GWRASAHINERLGLILAIITALRNaSQHISTVTNIQKIIEMALKVERDCLMNAPTKEGYKQGIKIKIDQLQEKRSQQTSN 134
                 7***********************9999999********************************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1728  (0.0963802); expected 358.6 (0.02)
Passed bias filter:                      558  (0.0311228); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1351.15
//
Query:       KHJ31546.1  [L=90]
Description: hypothetical protein EV44_g1754 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.21s 00:00:00.54 Elapsed: 00:00:00.35
# Mc/sec: 766.54
//
Query:       KHJ31547.1  [L=732]
Description: putative pt repeat family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-07   31.5   2.2    1.6e-07   31.4   0.0    2.2  3  AMPK1_CBM  Glycogen recognition site of AMP-activated protein
  ------ inclusion threshold ------
      0.063   13.2   0.0       0.15   12.0   0.0    1.6  1  DUF1409    Protein of unknown function (DUF1409)


Domain annotation for each model (and alignments):
>> AMPK1_CBM  Glycogen recognition site of AMP-activated protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   1.8e-11   1.6e-07      14      82 ..      29     107 ..      18     110 .. 0.83
   2 ?   -3.5   0.1       1.4   1.3e+04      54      75 ..     536     557 ..     531     559 .. 0.63
   3 ?   -3.6   0.3       1.5   1.3e+04      61      76 ..     625     641 ..     616     648 .. 0.48

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 1.8e-11
   AMPK1_CBM  14 VyvtGsfnn..WkkkipLk......ksekdfsvilkLpeGt.hqykFiV..DgewrvdpdlptatdeeGnlnNvievkes 82 
                 V+++G+f+n  W+  ++++        e +f++ l+Lp+G+ +qykF    +++w  ++++p+++de Gn nN++  +++
  KHJ31547.1  29 VFIAGTFTNppWQ-PLKMEsferkgPDEYKFEIRLDLPRGQdYQYKFRLgrEDHWNLNEEEPIVKDEAGNRNNLLPTERN 107
                 9*******65595.4777788886656789**********7589***9855799********************987765 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.4
   AMPK1_CBM  54 DgewrvdpdlptatdeeGnlnN 75 
                 +g+++ d+d++   +e++++ N
  KHJ31547.1 536 NGKMTEDQDQEENLNEMNSIQN 557
                 5666666666666666666655 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 1.5
   AMPK1_CBM  61 pdlptatdeeGn.lnNv 76 
                 p++++++++e+n  nN+
  KHJ31547.1 625 PNQEQEKKSENNdSNNT 641
                 44444443333303443 PP

>> DUF1409  Protein of unknown function (DUF1409)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.6e-05      0.15      10      32 ..     429     451 ..     420     456 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.6e-05
     DUF1409  10 vndvGsIRsRveeiqdqlpddla 32 
                  +d  sI + ++eiq++lp+d+a
  KHJ31547.1 429 PTDRASILAKLKEIQERLPEDEA 451
                 567789***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (732 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1738  (0.0969379); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.27s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 4742.82
//
Query:       KHJ31548.1  [L=225]
Description: hypothetical protein EV44_g5319 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.3e-09   35.4   0.0    1.3e-08   34.6   0.0    1.3  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type
  ------ inclusion threshold ------
      0.084   12.8   1.3       0.44   10.5   0.3    2.4  2  Imm6             Immunity protein Imm6


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.0   1.5e-12   1.3e-08       3      86 ..      65     148 ..      64     157 .. 0.95

  Alignments for each domain:
  == domain 1  score: 34.6 bits;  conditional E-value: 1.5e-12
  Retrotran_gag_2   3 kkdakalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsalgv 86 
                      kkd+  + +I + + d +++lv+ + t+k+ Wd+L++ y  +s++    l++++ ++  +e+ +v d+++kl e+  +++ ++ 
       KHJ31548.1  65 KKDKNIRVAISQLVPDVVFHLVDPSYTSKQSWDNLQQYYRPNSTEDIDDLLQEFWNFTVEEEIDVDDFVQKLSEIKAKIALIDR 148
                      78999**********************************************************************999988876 PP

>> Imm6  Immunity protein Imm6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.17   1.5e+03      85     106 ..      40      63 ..      15      78 .. 0.59
   2 ?   10.5   0.3   4.9e-05      0.44      84     120 ..      89     124 ..      58     125 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.17
        Imm6  85 Yiiwlayk..kekekylPetlesi 106
                 Yi++++ +  + + k++Pe++ si
  KHJ31548.1  40 YILTEKTElaNRNIKPIPENIVSI 63 
                 555544331144455677777666 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 4.9e-05
        Imm6  84 sYiiwlaykkekekylPetlesiddetleefiknlie 120
                 sY++++++++ +++y P++ e idd  l+ef+++++e
  KHJ31548.1  89 SYTSKQSWDNLQQYYRPNSTEDIDD-LLQEFWNFTVE 124
                 8**********************86.68999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       694  (0.0387082); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1630.82
//
Query:       KHJ31549.1  [L=812]
Description: putative fungal specific transcription factor domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.4e-18   64.7   0.4      1e-17   64.0   0.4    1.3  1  Fungal_trans  Fungal specific transcription factor domain
    1.6e-08   34.5  12.3    3.1e-08   33.6  12.3    1.5  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
      0.067   13.2   1.5       0.15   12.1   1.5    1.5  1  Sugarporin_N  Maltoporin periplasmic N-terminal extension


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.0   0.4   1.7e-21     1e-17       2     195 ..     191     377 ..     190     414 .. 0.89

  Alignments for each domain:
  == domain 1  score: 64.0 bits;  conditional E-value: 1.7e-21
  Fungal_trans   2 drffsnfhpqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsLl 98 
                   +++f+ +hp +pi+h+  f+ +    ++++ +  + +l +a+  l+ ++s++ + +++   ++ ++       rae+    + +s++s l+  q++ 
    KHJ31549.1 191 HIYFTLYHPSMPIIHQARFYMSL---ERPIQTRPPICLCYAMWTLATTLSPKYADYEDIFYERARRY----LERAEMKG--HGESFVS-LYFAQAWG 277
                   58*********************...8888888888888*****************97777776633....34888888..9999999.******** PP

  Fungal_trans  99 llelyektssdralherhhgvavrlarslgLhrnpsyvgkks....lwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcdddd 191
                   l++ ye    + +  ++  g +vrl++ lgL r  +++ + +     +k w+e  e+rrR++waaFy D++ ++  G p ++ ++++ ++LP +++ 
    KHJ31549.1 278 LVCNYEARKMYFSRSWMSTGRMVRLVQMLGLWRLDYDEADAKdylpPPKDWVE-LEERRRTFWAAFYSDRFASSGSGWPMIIQEHEVFTNLPSSEEA 373
                   *********************************9999998779**99999999.*****************************************95 PP

  Fungal_trans 192 lwes 195
                   +++ 
    KHJ31549.1 374 FESG 377
                   5554 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6  12.3   5.1e-12   3.1e-08       2      39 ..      45      81 ..      44      82 .. 0.95

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 5.1e-12
                S-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCCCE CS
     Zn_clus  2 aCdnCrkkKvKCdakkPaCsnCkklnleCtfysesskr 39
                +C +Crk+K KCd+ kP+C+ C++l+ eC+ y+e++++
  KHJ31549.1 45 SCVSCRKRKLKCDRIKPKCGTCVRLRHECE-YPERRRN 81
                8*****************************.9999875 PP

>> Sugarporin_N  Maltoporin periplasmic N-terminal extension
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.5   2.5e-05      0.15      28      41 ..      95     108 ..      85     109 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.5e-05
  Sugarporin_N  28 iEaRLaaLEkrLqe 41 
                   iEaRLa+LE rL++
    KHJ31549.1  95 IEARLAQLETRLNS 108
                   9***********85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (812 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       645  (0.0359752); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.26s 00:00:00.92 Elapsed: 00:00:00.42
# Mc/sec: 5835.10
//
Query:       KHJ31550.1  [L=184]
Description: hypothetical protein EV44_g3688 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       378  (0.0210832); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1412.79
//
Query:       KHJ31551.1  [L=225]
Description: putative effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.11   12.4   0.1        2.3    8.1   0.0    2.3  2  PsbN      Photosystem II reaction centre N protein (psbN)


Domain annotation for each model (and alignments):
>> PsbN  Photosystem II reaction centre N protein (psbN)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0   0.00013       2.3      28      42 ..      16      30 ..      11      31 .. 0.87
   2 ?    1.9   0.0     0.012   2.1e+02      27      32 ..      50      55 ..      48      66 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00013
        PsbN 28 GPPskeLaDPFedHE 42
                G  s++L+DP e H+
  KHJ31551.1 16 GRLSQQLQDPVERHD 30
                6679**********7 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.012
        PsbN 27 FGPPsk 32
                FGPPs 
  KHJ31551.1 50 FGPPST 55
                *****6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       322  (0.0179597); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1812.21
//
Query:       KHJ31552.1  [L=332]
Description: hypothetical protein EV44_g3757 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.13   12.7   0.0       0.26   11.7   0.0    1.4  1  DUF150    RimP N-terminal domain


Domain annotation for each model (and alignments):
>> DUF150  RimP N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.4e-05      0.26      44      70 ..     200     226 ..     196     227 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.4e-05
      DUF150  44 kvSraisalLdvedpieeeYtLEVsSP 70 
                 ++S ++ + Ld e pi  +++LE+  P
  KHJ31552.1 200 NLSSQVLPTLDIEKPIAPNFFLELKGP 226
                 79*********************8766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       381  (0.0212505); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2384.44
//
Query:       KHJ31553.1  [L=98]
Description: hypothetical protein EV44_g3894 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.051   14.7   0.1       0.07   14.3   0.1    1.1  1  Cytochrom_C  Cytochrome c


Domain annotation for each model (and alignments):
>> Cytochrom_C  Cytochrome c
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   3.9e-06      0.07      34      85 ..      26      77 ..      20      78 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 3.9e-06
                 HHHHTTT-HHHHHHHHTTSS--SSSHHHHHHHGGGGGGG.TT--HHHHHHHH CS
  Cytochrom_C 34 aaerasaasigasvanpaavsaprddfekkkltaemparkerlteqeiadla 85
                   e++    i a++++ ++++++ +++ k+k+++ + + k+++++q+++d+ 
   KHJ31553.1 26 TKEKRLMIDIAAIRQAYERREISQVIWIKGKSNPADAMTKSQYSDQALDDIL 77
                 56677777899999************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 724.55
//
Query:       KHJ31554.1  [L=859]
Description: putative phospholipid metabolism enzyme regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     2e-119  399.5   4.5     2e-119  399.5   4.5    2.6  3  Vac7      Vacuolar segregation subunit 7


Domain annotation for each model (and alignments):
>> Vac7  Vacuolar segregation subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.8      0.23   4.2e+03     219     226 ..      65      72 ..      21     114 .. 0.47
   2 ?   -3.1   5.5      0.23     4e+03      76     160 ..     208     291 ..     140     336 .. 0.72
   3 !  399.5   4.5  1.1e-123    2e-119       1     377 [.     355     719 ..     355     722 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.23
        Vac7 219 srpksprs 226
                 ++  s+rs
  KHJ31554.1  65 KKADSSRS 72 
                 11111111 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.23
        Vac7  76 anssDSdETFvYeSNPpdsedrrkrrfHSRtPSatSmasqvdqrsglrsiaevldseksvagkksmKFsnttynssaldsdsees 160
                 a  +D +E  + +S P d+++    r   R  S +S++ ++ q+s++ s+ +    e+ +++kk    +++t ++   +s+s+++
  KHJ31554.1 208 ASLNDDEEKLLVDSDPEDVSSFVGMRTPARGVSGASSTLETVQESSQPSTPTS-GLERDSEKKKAPIATSRTDQEYPEESTSPKT 291
                 67789999999999999999999999999999988887777777665553322.2234444444433333333333334333333 PP

  == domain 3  score: 399.5 bits;  conditional E-value: 1.1e-123
        Vac7   1 tvEteTVsSiPqvalgagagergangslrlkpSteTirPkkekkktsrkqssvtsgtassKADiFeakvAsavdeanssDSdETFvYeSNPpdsedrrk 99 
                 tvEteTVsSi q+++g   g  g  gslr+kpS+eTirP+kekkk +rk++s+tsg+assKADiFeakvAsavdea ssDS+ETFvYeSNPp+s++r+ 
  KHJ31554.1 355 TVETETVSSISQISVGL--GGLGIGGSLRVKPSNETIRPRKEKKKVVRKPPSLTSGAASSKADIFEAKVASAVDEATSSDSEETFVYESNPPESNERP- 450
                 8**************98..778889********************************************************************87777. PP

        Vac7 100 rrfHSRtPSatSmasqvdqrsglrsiaevldseksvagkksmKFsnttynssaldsdseesdegkkrsrgegsgrgtarhhhi.grygrkaknghsslf 197
                 rrf SRtPS+tSm+sq++qrsg+r+   +ld+++ + +kksmKF+n+ +n s       e+ +g+ rs++ g g+gta  hhi +r++r+a+n+h+slf
  KHJ31554.1 451 RRFQSRTPSTTSMVSQAEQRSGIRN---ILDGHQIIVMKKSMKFTNSHNNPSPDHVIVDETGKGTVRSSI-GAGKGTAIYHHInSRWARHAGNSHPSLF 545
                 9*******************99888...7888889***********997776655566666677778866.99*****9888869************** PP

        Vac7 198 deespftqaqksrakkl.srqssrpksprssasssrktasskkkkeeasydldaegaddErtPLvgsvRsarsrrsrrrpnsaslrqleelqqrrrsll 295
                 d+es f++ ++sr  ++ sr+ srp+sp++s +    ++++ +++  ++y++d      E+tPL++s+R+ +s + rr++   s+ qle+  q++r + 
  KHJ31554.1 546 DDESTFSNVASSRFLEAnSRRPSRPTSPKTSYKIV-VETGKDSSSAVSGYNVDY--NPSEQTPLLKSTRVIKSMHPRRQN--GSILQLEQ--QNSRPFS 637
                 ********999998776699***********9865.4455555556677**996..5689***************66555..89999*99..78899** PP

        Vac7 296 srfaaClvltvllllvvsgaigflfattkpLedvevvkiqnvlaseqelmlDlevkAvNpNvvavtvdeldvniFAkSkyvg 377
                 sr  + lvl+++ll+v+sga+gf++att+pL dve+++++++ as++ l++Dl v+A+N+N+vav ++ +d+ + A+S++  
  KHJ31554.1 638 SRCKSYLVLFLMLLIVLSGAVGFIYATTQPLLDVEILALNDLYASDRVLVFDLVVQAKNSNLVAVKIEYTDLVLIAQSRFSK 719
                 *******************************************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (859 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       815  (0.0454571); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.25s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 6012.60
//
Query:       KHJ31555.1  [L=1058]
Description: putative f-box and wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-10   39.8   0.1    9.2e-10   38.3   0.1    1.9  1  F-box-like  F-box-like
    3.4e-09   36.4   0.0    8.7e-09   35.0   0.0    1.7  1  F-box       F-box domain


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.1     1e-13   9.2e-10       2      44 ..     129     170 ..     128     174 .. 0.92

  Alignments for each domain:
  == domain 1  score: 38.3 bits;  conditional E-value: 1e-13
  F-box-like   2 srLPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrr 44 
                 ++LP+E+L  I+syLp+s+++++alV++r++ ++ +tp +Wr 
  KHJ31555.1 129 DQLPNEVLTVILSYLPASSITAVALVSKRFNVLV-TTPHVWRA 170
                 78*******************************9.577***96 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.0   9.7e-13   8.7e-09       1      44 [.     126     169 ..     126     172 .. 0.95

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 9.7e-13
                 -HHHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHH CS
       F-box   1 ftlsrLPsevlrhILerLplsdllalrrVSkgwrilidsdrlwc 44 
                 +++++LP+evl  IL++Lp s++ a ++VSk+++ l+  +  w+
  KHJ31555.1 126 PPFDQLPNEVLTVILSYLPASSITAVALVSKRFNVLVTTPHVWR 169
                 589**********************************9999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1058 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.26s 00:00:00.99 Elapsed: 00:00:00.45
# Mc/sec: 7122.50
//
Query:       KHJ31556.1  [L=700]
Description: putative pre-mrna-splicing factor syf1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.3e-16   58.6   3.7        1.7    9.6   0.0    8.8  8  TPR_14       Tetratricopeptide repeat
    7.5e-11   42.6   9.9      0.014   15.4   0.1    5.8  5  Suf          Suppressor of forked protein (Suf)
    8.1e-10   38.8   5.7       0.25   11.3   0.1    6.1  6  Mad3_BUB1_I  Mad3/BUB1 homology region 1
    2.4e-08   33.6   0.4    0.00025   20.4   0.6    4.1  5  TPR_15       Tetratricopeptide repeat
    4.7e-08   32.6   6.0        1.5    9.2   0.0    7.3  7  TPR_8        Tetratricopeptide repeat
    1.2e-07   31.9   3.1       0.68   10.3   0.0    6.1  6  TPR_12       Tetratricopeptide repeat
    6.8e-05   22.7  10.7       0.63   10.3   0.0    6.6  7  TPR_2        Tetratricopeptide repeat
    0.00021   21.0   2.1     0.0052   16.5   0.1    3.6  4  RPN7         26S proteasome subunit RPN7
    0.00026   20.5   0.3        5.9    6.2   0.0    4.5  5  SNAP         Soluble NSF attachment protein, SNAP
     0.0038   17.3   0.1       0.87    9.7   0.1    3.7  3  MIT          MIT (microtubule interacting and transport) doma
  ------ inclusion threshold ------
      0.021   14.7   6.3         41    4.2   0.0    6.0  6  TPR_10       Tetratricopeptide repeat
        0.1   12.5   0.0        2.4    8.1   0.0    3.3  2  TPR_1        Tetratricopeptide repeat
       0.23   10.6   8.5        3.9    6.5   0.1    5.1  5  NRDE-2       NRDE-2, necessary for RNA interference
        3.2    8.0   5.7        5.1    7.4   0.0    4.5  6  TPR_7        Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1       0.3   3.9e+02       2      39 ..      41      80 ..      40      84 .. 0.79
   2 ?    6.1   0.0     0.019        25      13      35 ..      87     109 ..      79     118 .. 0.85
   3 ?    6.4   0.0     0.015        20       3      28 ..     192     217 ..     191     219 .. 0.88
   4 !    8.0   0.0    0.0047       6.1       2      29 ..     334     361 ..     333     370 .. 0.90
   5 !    9.6   0.0    0.0014       1.7       2      33 ..     372     402 ..     371     408 .. 0.86
   6 ?    4.7   0.0     0.051        65       7      32 ..     463     488 ..     457     502 .. 0.79
   7 !    9.3   0.2    0.0017       2.2       3      36 ..     532     565 ..     531     571 .. 0.87
   8 ?    2.5   0.0      0.27   3.5e+02       8      29 ..     609     630 ..     602     644 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.3
      TPR_14  2 eallalaeallalGdpdeAiallrralalaP..ddaeawl 39
                + + +++++ll +    + ++ ++ral++ P  ++ ++w 
  KHJ31556.1 41 KIWEMYLSFLLLQPLVTTTRKTFDRALRALPltQHNRIWA 80
                678899999999999999**********999433335665 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.019
      TPR_14  13 alGdpdeAiallrralalaPdda 35 
                 ++ + d+A+++ rr+l+ +P+d 
  KHJ31556.1  87 NSAEGDTAVKIWRRYLQIHPEDT 109
                 667889**************985 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.015
      TPR_14   3 allalaeallalGdpdeAiallrral 28 
                 ++  la +  + G++++A++++++ +
  KHJ31556.1 192 LWTGLATYWITMGNFEKARDVYEEGI 217
                 6778999999*************976 PP

  == domain 4  score: 8.0 bits;  conditional E-value: 0.0047
      TPR_14   2 eallalaeallalGdpdeAiallrrala 29 
                 e+++++a++++  Gd  +A+ + ++a++
  KHJ31556.1 334 ELWADYAKFYEKGGDIHTARLIMEKAVK 361
                 79*****************988888875 PP

  == domain 5  score: 9.6 bits;  conditional E-value: 0.0014
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPd 33 
                 +++ + ae +l+++++deA+++  +a++ aP+
  KHJ31556.1 372 DMWIEWAEMELRNENFDEAVKIMAKAVQ-APK 402
                 679999*******************977.665 PP

  == domain 6  score: 4.7 bits;  conditional E-value: 0.051
      TPR_14   7 laeallalGdpdeAiallrralalaP 32 
                 +a +l+++  ++e+ ++++r l+l+ 
  KHJ31556.1 463 YANLLEENHYYEESFKIYERGLDLFS 488
                 899*******************9874 PP

  == domain 7  score: 9.3 bits;  conditional E-value: 0.0017
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddae 36 
                 ++l+++ +++++G  + A+++++ra ++  d+++
  KHJ31556.1 532 LYLMYGNLEEERGLARHAMRIYERATRAVSDEDR 565
                 689**********************997666555 PP

  == domain 8  score: 2.5 bits;  conditional E-value: 0.27
      TPR_14   8 aeallalGdpdeAiallrrala 29 
                 a+ + +lG+ d+A+a++  a +
  KHJ31556.1 609 ADMEKRLGEIDRARAIYGHASQ 630
                 667889*********9977765 PP

>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   1.1e-05     0.014      57     141 ..      27     109 ..      18     118 .. 0.90
   2 ?    4.7   0.0     0.019        25      78     120 ..     198     240 ..     175     247 .. 0.85
   3 ?    4.3   0.2     0.026        33      74     133 ..     337     397 ..     326     453 .. 0.82
   4 !   13.9   0.7     3e-05     0.039      47     145 ..     470     568 ..     425     572 .. 0.78
   5 ?    4.9   0.0     0.017        22      89     125 ..     585     620 ..     581     677 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.1e-05
         Suf  57 kIFelGlKkFpedeefvlkYldyLislnddnnaRvlfekvvsklskekeakelykkfleyestfgdlssilklekRmeelfpeds 141
                   Fe++l + ++ ++    Yl++L+    ++++R +f++++++l   +  + +++ +l ++    + +  +k+ +R+ ++ ped 
  KHJ31556.1  27 SLFERALILLNKMPKIWEMYLSFLLLQPLVTTTRKTFDRALRALPLTQ-HNRIWALYLPFAN-SAEGDTAVKIWRRYLQIHPEDT 109
                 57999999999999999****************************999.9**********75.556778899*********9986 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.019
         Suf  78 dyLislnddnnaRvlfekvvsklskekeakelykkfleyestf 120
                  y i + + ++aR ++e+ +++++  ++   +++ ++e+e  +
  KHJ31556.1 198 TYWITMGNFEKARDVYEEGITSVMTVRDFTMIFDSYVEFEEVI 240
                 5788899999***************999************876 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.026
         Suf  74 lkYldyLislnddnnaRvlfekvvsk.lskekeakelykkfleyestfgdlssilklekRm 133
                 + Y ++  +  d ++aR ++ek+v+  ++   e+ +++  ++e e +  + ++ +k+ ++ 
  KHJ31556.1 337 ADYAKFYEKGGDIHTARLIMEKAVKVpFKTVAELADMWIEWAEMELRNENFDEAVKIMAKA 397
                 57999999999*************9944444558999999999999988888888876665 PP

  == domain 4  score: 13.9 bits;  conditional E-value: 3e-05
         Suf  47 yiskdkkvAtkIFelGlKkFpedeefvlkYldyLislndd....nnaRvlfekvvsklskekeakelykkfleyestfgdlssilklekRmeelfpeds 141
                   + +++  +kI+e+Gl +F+   +f l +l yL+++ d     +++R lfe++v+ + ++  ak ly  + + e + g       + +R   ++++++
  KHJ31556.1 470 NHYYEES--FKIYERGLDLFSYPVAFELWNL-YLTKVVDRkvsiERLRDLFEQAVEGVPPKF-AKVLYLMYGNLEEERGLARHAMRIYERATRAVSDED 564
                 3344444..9******************999.999999963333689***************.**********99999999999999999888888887 PP

         Suf 142 kleq 145
                   + 
  KHJ31556.1 565 RADM 568
                 7665 PP

  == domain 5  score: 4.9 bits;  conditional E-value: 0.017
         Suf  89 aRvlfekvvsklskekeakelykkfleyestfgdlss 125
                 +R ++e+++++l++++ a+++  kf++ e++ g+++ 
  KHJ31556.1 585 TRPIYERAITALTDKD-ARDMCLKFADMEKRLGEIDR 620
                 7889999999999999.77777777777777776664 PP

>> Mad3_BUB1_I  Mad3/BUB1 homology region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.4   1.8e+03      67      93 ..      95     122 ..      89     131 .. 0.70
   2 !    7.5   0.0    0.0029       3.8      97     124 .]     190     217 ..     183     217 .. 0.90
   3 !    6.6   0.0    0.0057       7.2      77     124 .]     313     360 ..     303     360 .. 0.83
   4 !    8.9   0.1    0.0011       1.4      94     123 ..     368     397 ..     364     398 .. 0.91
   5 !   11.3   0.1    0.0002      0.25      68     124 .]     424     484 ..     415     484 .. 0.88
   6 ?    0.4   0.0      0.46   5.9e+02      98     123 ..     531     556 ..     495     565 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.4
                  HHHHHHHHTTS.S-HHHHHHHHHHHTTS CS
  Mad3_BUB1_I  67 lklwlkyadlv.eepreifkflaskkiG 93 
                  +k+w +y ++  e+ +e+ + l++ +  
   KHJ31556.1  95 VKIWRRYLQIHpEDTEEFIDLLIKTGYH 122
                  7999999997745566666666666655 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0029
                  HHHHHHHHHHHHHTT-HHHHHHHHHHH. CS
  Mad3_BUB1_I  97 alfYeewAellekkgrfkeAeevyelGi 124
                   ++++  A++  ++g+f++A++vye+Gi
   KHJ31556.1 190 GKLWTGLATYWITMGNFEKARDVYEEGI 217
                  5789999********************8 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0057
                  SS-HHHHHHHHHHHTTSTTBHHHHHHHHHHHHHTT-HHHHHHHHHHH. CS
  Mad3_BUB1_I  77 veepreifkflaskkiGtklalfYeewAellekkgrfkeAeevyelGi 124
                  v+  ++  + ++ kk   ++ +++ ++A+++ek g++  A+ ++e+++
   KHJ31556.1 313 VKTYTDAISSIQPKKATGRFHELWADYAKFYEKGGDIHTARLIMEKAV 360
                  5556666777777888889999********************999875 PP

  == domain 4  score: 8.9 bits;  conditional E-value: 0.0011
                  TTBHHHHHHHHHHHHHTT-HHHHHHHHHHH CS
  Mad3_BUB1_I  94 tklalfYeewAellekkgrfkeAeevyelG 123
                   +la +++ewAe+  ++++f+eA +++ ++
   KHJ31556.1 368 AELADMWIEWAEMELRNENFDEAVKIMAKA 397
                  5899**********************9987 PP

  == domain 5  score: 11.3 bits;  conditional E-value: 0.0002
                  HHHHHHHTTS......S-HHHHHHHHHHHTTSTTBHHHHHHHHHHHHHTT-HHHHHHHHHHH. CS
  Mad3_BUB1_I  68 klwlkyadlv......eepreifkflaskkiGtklalfYeewAellekkgrfkeAeevyelGi 124
                  klw  y+dlv      +e r+i++ +++ +i t  +    ++A+lle+++ ++e+ ++ye+G+
   KHJ31556.1 424 KLWSFYVDLVesvstlSETRKIYERIFELRIATPQTV--VNYANLLEENHYYEESFKIYERGL 484
                  788888888878888899*************997766..69********************96 PP

  == domain 6  score: 0.4 bits;  conditional E-value: 0.46
                  HHHHHHHHHHHHTT-HHHHHHHHHHH CS
  Mad3_BUB1_I  98 lfYeewAellekkgrfkeAeevyelG 123
                   +Y  + +l e++g  ++A ++ye++
   KHJ31556.1 531 VLYLMYGNLEEERGLARHAMRIYERA 556
                  68999999999999999999999875 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.07        90     109     195 ..      39     121 ..      36     140 .. 0.81
   2 ?   -2.0   0.0       1.3   1.7e+03     211     236 ..     187     212 ..     178     219 .. 0.79
   3 !    5.4   0.0    0.0071       9.1     131     179 ..     318     366 ..     307     375 .. 0.82
   4 !   20.4   0.6   1.9e-07   0.00025      12     180 ..     375     564 ..     368     576 .. 0.84
   5 ?   -3.1   0.0       2.7   3.5e+03     254     270 ..     608     624 ..     598     666 .. 0.56

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.07
      TPR_15 109 sprlLssalellerakdydriaellksleeeeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgr 195
                  p++++ +l  l  +  ++++++ + ++ +   + q  ++++++  ++   ++ d A+++ r+ l+  p+++e   +++ lli +g 
  KHJ31556.1  39 MPKIWEMYLSFLLLQPLVTTTRKTFDRALRALPLTQHNRIWALYLPFANS-AEGDTAVKIWRRYLQIHPEDTE---EFIDLLIKTGY 121
                 5788899999999999999999999999999999999*******999865.67899*************9875...55555555555 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.3
      TPR_15 211 esdasLwgplaaAlllLgrpkkALey 236
                 ++  +Lw  la+ + ++g+ +kA + 
  KHJ31556.1 187 DQRGKLWTGLATYWITMGNFEKARDV 212
                 56678999999999999999988555 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.0071
      TPR_15 131 ellksleeeeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapds 179
                 + + s+++++a  +    ++ +a++y++ g+   A  ++++A+++++++
  KHJ31556.1 318 DAISSIQPKKATGRFHELWADYAKFYEKGGDIHTARLIMEKAVKVPFKT 366
                 567777788888888899**************************99874 PP

  == domain 4  score: 20.4 bits;  conditional E-value: 1.9e-07
      TPR_15  12 lklatllykqgdvkkAlevLkeaaqkaapskdt................eyWrtladLAwalqqedearkAyrqLlasgkaraedyerliel.lydaep 93 
                 +++a++ ++++++++A +++++a+q  + s+ +                + W ++ dL  ++    e+rk+y+++ + + a++++  +  +l  ++  +
  KHJ31556.1 375 IEWAEMELRNENFDEAVKIMAKAVQAPKRSTVDyfdetlspqqrvhkswKLWSFYVDLVESVSTLSETRKIYERIFELRIATPQTVVNYANLlEENHYY 473
                 799*****************877766654444489999******************************************************5578889 PP

      TPR_15  94 keaarlaekgwrrfrsp...rlLssal.ellerakdydriaellksleeeeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdss 180
                 +e+ ++ e g + f  p   +l+  +l ++++r   ++r+++l++++ e    +     +l++++l++++g    A+r+y++A ++  d++
  KHJ31556.1 474 EESFKIYERGLDLFSYPvafELWNLYLtKVVDRKVSIERLRDLFEQAVEGVPPKFAKVLYLMYGNLEEERGLARHAMRIYERATRAVSDED 564
                 99999999998888887222345555523556677789999****99888778888899999*********************98877765 PP

  == domain 5  score: -3.1 bits;  conditional E-value: 2.7
      TPR_15 254 YADaleqagradeAwrl 270
                 +AD  ++ g+ d+A ++
  KHJ31556.1 608 FADMEKRLGEIDRARAI 624
                 44444444444444332 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.81     1e+03      10      24 ..     115     129 ..     114     130 .. 0.89
   2 ?    6.2   0.0     0.011        14      11      28 ..     199     217 ..     191     219 .. 0.81
   3 !    9.2   0.0    0.0012       1.5       2      30 ..     334     362 ..     333     365 .. 0.93
   4 ?    3.2   0.0     0.098   1.3e+02      13      29 ..     383     399 ..     371     403 .. 0.83
   5 ?    4.3   0.0     0.046        59       5      30 ..     461     486 ..     457     488 .. 0.89
   6 ?    1.7   0.1       0.3   3.9e+02       3      29 ..     532     558 ..     531     559 .. 0.92
   7 ?    2.0   0.0      0.24   3.1e+02       3      27 ..     604     628 ..     603     631 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.81
                 HHHHTT-HHHHHHHH CS
       TPR_8  10 iylklgdyeeAkeyy 24 
                 +++k+g + eA++ y
  KHJ31556.1 115 LLIKTGYHTEAVKNY 129
                 799*********987 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.011
                 H.HHTT-HHHHHHHHHHHH CS
       TPR_8  11 y.lklgdyeeAkeyyekal 28 
                 y +++g++e+A  +ye+ +
  KHJ31556.1 199 YwITMGNFEKARDVYEEGI 217
                 3389************987 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.0012
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekalel 30 
                 e++   ++ y+k gd++ A   +eka++ 
  KHJ31556.1 334 ELWADYAKFYEKGGDIHTARLIMEKAVKV 362
                 789***********************985 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.098
                 HTT-HHHHHHHHHHHHH CS
       TPR_8  13 klgdyeeAkeyyekale 29 
                   ++++eA++ + ka++
  KHJ31556.1 383 RNENFDEAVKIMAKAVQ 399
                 6789***********97 PP

  == domain 5  score: 4.3 bits;  conditional E-value: 0.046
                 HHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyyekalel 30 
                 +n ++++++   yee+ + ye+ l+l
  KHJ31556.1 461 VNYANLLEENHYYEESFKIYERGLDL 486
                 6899999***************9986 PP

  == domain 6  score: 1.7 bits;  conditional E-value: 0.3
                 HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekale 29 
                 +y++ g++ ++ g    A+  ye+a++
  KHJ31556.1 532 LYLMYGNLEEERGLARHAMRIYERATR 558
                 5999********************986 PP

  == domain 7  score: 2.0 bits;  conditional E-value: 0.24
                 HHHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyeka 27 
                 ++++ ++  + lg+++ A + y +a
  KHJ31556.1 604 MCLKFADMEKRLGEIDRARAIYGHA 628
                 6788899999**********99777 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.067        86      55      71 ..     199     216 ..     191     219 .. 0.76
   2 ?   -3.2   0.0       8.7   1.1e+04      10      30 ..     340     360 ..     336     362 .. 0.58
   3 !   10.3   0.0   0.00053      0.68       2      31 ..     370     399 ..     369     404 .. 0.92
   4 !    7.0   0.0    0.0055       7.1      21      74 ..     434     486 ..     431     488 .. 0.81
   5 ?    3.0   0.4     0.099   1.3e+02      54      76 ..     532     554 ..     528     559 .. 0.82
   6 ?    1.7   0.0      0.26   3.3e+02       9      31 ..     608     630 ..     603     634 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.067
      TPR_12  55 yr.algryeeAlelleea 71 
                 y+  +g++e+A++ +ee 
  KHJ31556.1 199 YWiTMGNFEKARDVYEEG 216
                 544779999999999985 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 8.7
      TPR_12  10 aavlrrlgrydeAlellekal 30 
                 a ++ + g+ + A+ + eka+
  KHJ31556.1 340 AKFYEKGGDIHTARLIMEKAV 360
                 555555666666666666654 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.00053
      TPR_12   2 vatalnnlaavlrrlgrydeAlellekale 31 
                 +a ++ ++a++++r +++deA ++  ka++
  KHJ31556.1 370 LADMWIEWAEMELRNENFDEAVKIMAKAVQ 399
                 689999**********************87 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.0055
      TPR_12  21 eAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74 
                 e+ + l + + i++r+++  + +t +t  n++ l+++   yee  +++e+ l++
  KHJ31556.1 434 ESVSTLSETRKIYERIFE-LRIATPQTVVNYANLLEENHYYEESFKIYERGLDL 486
                 778888888889988885.58899999999999999999999999999998887 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.099
      TPR_12  54 lyralgryeeAlelleealaiae 76 
                 ly++ g++ee + l ++a++i+e
  KHJ31556.1 532 LYLMYGNLEEERGLARHAMRIYE 554
                 57788999999999999999998 PP

  == domain 6  score: 1.7 bits;  conditional E-value: 0.26
      TPR_12   9 laavlrrlgrydeAlellekale 31 
                  a+++ rlg+ d A++++ +a +
  KHJ31556.1 608 FADMEKRLGEIDRARAIYGHASQ 630
                 57777788888888888877765 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       8.2   1.1e+04      20      34 .]      94     108 ..      92     108 .. 0.85
   2 !   10.3   0.0   0.00049      0.63       2      28 ..     191     217 ..     190     218 .. 0.90
   3 ?    1.3   0.1      0.37   4.8e+02       2      29 ..     334     361 ..     333     362 .. 0.92
   4 !    6.7   0.0    0.0068       8.7       3      29 ..     373     399 ..     371     400 .. 0.89
   5 ?    4.9   0.1     0.027        34       6      30 ..     462     486 ..     458     488 .. 0.92
   6 ?   -2.6   0.3       6.5   8.4e+03      10      27 ..     539     556 ..     532     559 .. 0.55
   7 ?   -1.3   0.1       2.6   3.4e+03      13      27 ..     614     628 ..     609     631 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 8.2
       TPR_2  20 AleafekAleldPnn 34 
                 A++ +++ l++ P++
  KHJ31556.1  94 AVKIWRRYLQIHPED 108
                 88999999***9986 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00049
       TPR_2   2 ealynlGlayyklgdyeeAleafekAl 28 
                 +++  l+  ++ +g++e+A++ +e+ +
  KHJ31556.1 191 KLWTGLATYWITMGNFEKARDVYEEGI 217
                 578999999***************965 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.37
       TPR_2   2 ealynlGlayyklgdyeeAleafekAle 29 
                 e++   ++ y+k gd   A+  +ekA++
  KHJ31556.1 334 ELWADYAKFYEKGGDIHTARLIMEKAVK 361
                 789999*******************987 PP

  == domain 4  score: 6.7 bits;  conditional E-value: 0.0068
       TPR_2   3 alynlGlayyklgdyeeAleafekAle 29 
                  + ++++  +++ +++eA++ + kA++
  KHJ31556.1 373 MWIEWAEMELRNENFDEAVKIMAKAVQ 399
                 589999999**************9986 PP

  == domain 5  score: 4.9 bits;  conditional E-value: 0.027
       TPR_2   6 nlGlayyklgdyeeAleafekAlel 30 
                 n +++++++  yee  + +e+ l l
  KHJ31556.1 462 NYANLLEENHYYEESFKIYERGLDL 486
                 7899******************998 PP

  == domain 6  score: -2.6 bits;  conditional E-value: 6.5
       TPR_2  10 ayyklgdyeeAleafekA 27 
                 + +++g    A + +e+A
  KHJ31556.1 539 LEEERGLARHAMRIYERA 556
                 555555555566666666 PP

  == domain 7  score: -1.3 bits;  conditional E-value: 2.6
       TPR_2  13 klgdyeeAleafekA 27 
                 +lg+ ++A++ +  A
  KHJ31556.1 614 RLGEIDRARAIYGHA 628
                 89******9988766 PP

>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       3.4   4.3e+03      40      63 ..     110     133 ..     107     137 .. 0.83
   2 ?    1.7   0.0      0.14   1.8e+02      39      65 ..     193     219 ..     183     236 .. 0.82
   3 !   16.5   0.1   4.1e-06    0.0052      37     106 ..     334     404 ..     321     564 .. 0.73
   4 ?   -2.6   0.1       2.9   3.7e+03      25      61 ..     591     627 ..     589     633 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 3.4
                 HHHHHHHHHCT-HHHHHHHHHTCC CS
        RPN7  40 ldlaehYlkigdleeAlkaysrir 63 
                 +++ +  +k+g ++eA+k+y  i+
  KHJ31556.1 110 EEFIDLLIKTGYHTEAVKNYIVIL 133
                 678889999999******998765 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.14
                 HHHHHHHHHHCT-HHHHHHHHHTCCCC CS
        RPN7  39 kldlaehYlkigdleeAlkaysrirey 65 
                 +  la +++++g++e+A   y++ +  
  KHJ31556.1 193 WTGLATYWITMGNFEKARDVYEEGITS 219
                 56799****************995554 PP

  == domain 3  score: 16.5 bits;  conditional E-value: 4.1e-06
                 HHHHHHHHHHHHCT-HHHHHHHHHT.CCCC--SHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHCSSS-- CS
        RPN7  37 rakldlaehYlkigdleeAlkaysr.ireyctslkhkidmllnlirvaiffndwdlvskylekakellekg 106
                 +++ d a++Y k gd+  A   +++ +  +  +    +dm++++ ++++  +++d + k ++ka +  ++ 
  KHJ31556.1 334 ELWADYAKFYEKGGDIHTARLIMEKaVKVPFKTVAELADMWIEWAEMELRNENFDEAVKIMAKAVQAPKRS 404
                 567899*******************556688999999***************************9998883 PP

  == domain 4  score: -2.6 bits;  conditional E-value: 2.9
                 HHHHTT-HHHHHHHHHHHHHHHHHCT-HHHHHHHHHT CS
        RPN7  25 dakenlgkeeirrakldlaehYlkigdleeAlkaysr 61 
                 +a + l++ + r+  l++a+   + g+++ A + y  
  KHJ31556.1 591 RAITALTDKDARDMCLKFADMEKRLGEIDRARAIYGH 627
                 5566788888888888888888888888888777755 PP

>> SNAP  Soluble NSF attachment protein, SNAP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.56   7.2e+02     156     186 ..     191     221 ..     185     233 .. 0.81
   2 !    5.2   0.1    0.0093        12      92     182 ..     311     398 ..     305     407 .. 0.78
   3 !    6.2   0.0    0.0046       5.9      89     160 ..     431     502 ..     425     522 .. 0.81
   4 ?    1.7   0.0      0.11   1.4e+02     125     163 ..     540     578 ..     529     598 .. 0.75
   5 ?   -0.2   0.0      0.42   5.3e+02     153     180 ..     600     627 ..     582     632 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.56
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHTTS CS
        SNAP 156 kcllkvAelsaelekyekAieiyekvakksl 186
                 k++  +A +  +++++ekA ++ye+ +++ +
  KHJ31556.1 191 KLWTGLATYWITMGNFEKARDVYEEGITSVM 221
                 5666788888999999999999999877766 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0093
                 HHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHH CS
        SNAP  92 eAvealekAieiytekgrfrraAklkkeiaelyekelgdlekAieaYekAaelyeqeeakalankcllkvAelsaelekyekAieiyekva 182
                 e v++++ Ai+  + k    r  +l  + a+ yek  gd++ A    ekA ++    +  a+   ++++ Ae++ ++e++++A++i  k  
  KHJ31556.1 311 EIVKTYTDAISSIQPKKATGRFHELWADYAKFYEKG-GDIHTARLIMEKAVKV--PFKTVAELADMWIEWAEMELRNENFDEAVKIMAKAV 398
                 556666777777666666666667778899999999.9999999999999996..345677888999999999999999999999977665 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0046
                 -HHHHHHHHHHHHHHHHHTT-HHHHH.HHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHTT-HHHHHHHHHH CS
        SNAP  89 speeAvealekAieiytekgrfrraA.klkkeiaelyekelgdlekAieaYekAaelyeqeeakalankcllk 160
                 +  e+v++l+++ +iy +   +r a  +   + a+l+e++ + +e++ + Ye+  +l++   a  l n  l k
  KHJ31556.1 431 DLVESVSTLSETRKIYERIFELRIATpQTVVNYANLLEEN-HYYEESFKIYERGLDLFSYPVAFELWNLYLTK 502
                 56689999***************998355689******99.****************9876666555555555 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.11
                 HHTT--HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
        SNAP 125 ekelgdlekAieaYekAaelyeqeeakalankcllkvAe 163
                 e+e g  ++A++ Ye+A    ++e+    +n    k A+
  KHJ31556.1 540 EEERGLARHAMRIYERATRAVSDEDRADMFNLYITKSAS 578
                 455588999***************999999999999885 PP

  == domain 5  score: -0.2 bits;  conditional E-value: 0.42
                 HHHHHHHHHHHHHHHTT-HHHHHHHHHH CS
        SNAP 153 lankcllkvAelsaelekyekAieiyek 180
                 +a  + lk A+++ +l++ ++A +iy +
  KHJ31556.1 600 DARDMCLKFADMEKRLGEIDRARAIYGH 627
                 4567778888888888888888887755 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.097   1.2e+02      18      35 ..     204     221 ..     202     225 .. 0.85
   2 ?   -1.9   0.1       2.9   3.7e+03      18      31 ..     385     398 ..     378     402 .. 0.55
   3 !    9.7   0.1   0.00068      0.87       7      36 ..     460     489 ..     458     509 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.097
         MIT  18 gnyeeAlelYkealelLl 35 
                 gn+e+A + Y+e++   +
  KHJ31556.1 204 GNFEKARDVYEEGITSVM 221
                 8************97665 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.9
         MIT  18 gnyeeAlelYkeal 31 
                 +n++eA++   +a+
  KHJ31556.1 385 ENFDEAVKIMAKAV 398
                 55555555433333 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00068
         MIT   7 lvkkAveeDnagnyeeAlelYkealelLlq 36 
                 +v+ A  +++++ yee ++ Y+ +l+l++ 
  KHJ31556.1 460 VVNYANLLEENHYYEESFKIYERGLDLFSY 489
                 577788899******************985 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.077        99       8      29 ..     196     217 ..     194     219 .. 0.88
   2 ?   -3.2   0.0       7.1   9.1e+03      19      30 ..     350     361 ..     345     362 .. 0.78
   3 ?    4.2   0.0     0.032        41      15      31 ..     384     400 ..     378     405 .. 0.85
   4 ?    0.2   0.1      0.57   7.4e+02      24      34 ..     472     482 ..     462     486 .. 0.68
   5 ?    2.9   0.4     0.082     1e+02      16      35 ..     537     556 ..     533     556 .. 0.92
   6 ?    0.0   0.0      0.67   8.5e+02      13      28 ..     613     628 ..     608     632 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.077
      TPR_10   8 LanalrqrgrydeAealleeal 29 
                 La +   +g++++A++ +ee +
  KHJ31556.1 196 LATYWITMGNFEKARDVYEEGI 217
                 8888999************965 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 7.1
      TPR_10  19 deAealleeala 30 
                 + A+ ++e+a+ 
  KHJ31556.1 350 HTARLIMEKAVK 361
                 568999***986 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.032
      TPR_10  15 rgrydeAealleealai 31 
                   ++deA++++ +a+++
  KHJ31556.1 384 NENFDEAVKIMAKAVQA 400
                 5799**********985 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.57
      TPR_10  24 lleealairrr 34 
                 ++ee+  i++r
  KHJ31556.1 472 YYEESFKIYER 482
                 57777777776 PP

  == domain 5  score: 2.9 bits;  conditional E-value: 0.082
      TPR_10  16 grydeAealleealairrrl 35 
                 g+++e + l+++a++i++r+
  KHJ31556.1 537 GNLEEERGLARHAMRIYERA 556
                 78999999**********96 PP

  == domain 6  score: 0.0 bits;  conditional E-value: 0.67
      TPR_10  13 rqrgrydeAealleea 28 
                  ++g+ d+A+a++ +a
  KHJ31556.1 613 KRLGEIDRARAIYGHA 628
                 6899********9877 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0    0.0019       2.4       2      28 ..     191     217 ..     190     218 .. 0.90
   2 ?   -0.7   0.0       1.1   1.4e+03       4      22 ..     374     392 ..     371     392 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0019
                 HHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekAL 28 
                 k + +l+     +g++++A + ye+ +
  KHJ31556.1 191 KLWTGLATYWITMGNFEKARDVYEEGI 217
                 67999999999*************976 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.1
                 HHHHHHHHHHTT-HHHHHH CS
       TPR_1   4 lynlGnayfklgkydeAle 22 
                 +   + + ++++++deA++
  KHJ31556.1 374 WIEWAEMELRNENFDEAVK 392
                 666667778899*****86 PP

>> NRDE-2  NRDE-2, necessary for RNA interference
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.1    0.0031       3.9      73     136 ..      11      71 ..       5      80 .. 0.84
   2 ?    1.2   0.0      0.13   1.7e+02      99     160 ..      92     157 ..      74     165 .. 0.73
   3 ?    0.8   0.8      0.17   2.2e+02      91     133 ..     409     451 ..     355     478 .. 0.71
   4 ?    1.1   0.1      0.14   1.7e+02      96     133 ..     487     522 ..     463     563 .. 0.81
   5 ?   -0.3   0.0      0.35   4.5e+02      53      53 ..     588     588 ..     537     676 .. 0.54

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0031
      NRDE-2  73 elLklgseiwdseklakeWeellkenpnsvkLWreyldfrqsnfasfsvekvkelyekclrtls 136
                 + ++ ++++ + ek+++ +e++l   ++  k+W+ yl+f + +     v+++++++ ++lr+l 
  KHJ31556.1  11 GKINSARYFSEYEKINSLFERALILLNKMPKIWEMYLSFLLLQ---PLVTTTRKTFDRALRALP 71 
                 5667788999999***************************984...557888888888888875 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.13
      NRDE-2  99 pnsvkLWreyldfrqsnfasf.....svekvkelyekclrtlsaklegrkvshkaeeeteeellyvl 160
                 ++ vk+Wr+yl++  ++ ++f     +     e++++ +  l++ + ++k+ +  ++   ++++++l
  KHJ31556.1  92 DTAVKIWRRYLQIHPEDTEEFidlliKTGYHTEAVKNYIVILNNPKFKSKNGKGLFQ-LWSDMVDLL 157
                 57899********99999999888887777777777777777777666665333333.355666655 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.17
      NRDE-2  91 Weellk...enpnsvkLWreyldfrqsnfasfsvekvkelyekclr 133
                 ++e+l+      +s kLW  y+d + s     ++++++++ye++++
  KHJ31556.1 409 FDETLSpqqRVHKSWKLWSFYVDLVES---VSTLSETRKIYERIFE 451
                 444444543344788999999999988...5677888888888776 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.14
      NRDE-2  96 kenpnsvkLWreyldfrqsnfasfsvekvkelyekclr 133
                 +++p  ++LW+ yl  +     ++s+e++++l+e++++
  KHJ31556.1 487 FSYPVAFELWNLYLTKVVD--RKVSIERLRDLFEQAVE 522
                 4678899*******99999..78899999999999876 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 0.35
      NRDE-2  53 i 53 
                 i
  KHJ31556.1 588 I 588
                 3 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       6.1   7.8e+03      14      26 ..      21      33 ..      17      38 .. 0.76
   2 ?    7.4   0.0     0.004       5.1       5      29 ..     196     218 ..     192     226 .. 0.84
   3 ?   -3.1   0.1       8.7   1.1e+04      14      28 ..     472     484 ..     464     486 .. 0.70
   4 ?   -2.2   0.0       4.6   5.9e+03      18      29 ..     549     558 ..     543     566 .. 0.72
   5 ?   -2.2   0.0       4.3   5.6e+03      21      30 ..     588     598 ..     587     602 .. 0.66
   6 ?   -2.5   0.0       5.5     7e+03      11      24 ..     614     627 ..     613     632 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 6.1
       TPR_7 14 dyeeAielyeqsL 26
                +ye+  +l+e++L
  KHJ31556.1 21 EYEKINSLFERAL 33
                7888889999977 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.004
       TPR_7   5 LarlysrlGdyeeAielyeqsLalt 29 
                 La  +  +G++e+A ++ye+  ++t
  KHJ31556.1 196 LATYWITMGNFEKARDVYEE--GIT 218
                 7888999************9..877 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 8.7
       TPR_7  14 dyeeAielyeqsLal 28 
                 +yee  ++ye+  +l
  KHJ31556.1 472 YYEESFKIYER--GL 484
                 68888889998..66 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 4.6
       TPR_7  18 AielyeqsLalt 29 
                 A ++ye+  a++
  KHJ31556.1 549 AMRIYER--ATR 558
                 7889999..776 PP

  == domain 5  score: -2.2 bits;  conditional E-value: 4.3
       TPR_7  21 lyeqsL.altk 30 
                 +ye+++ alt+
  KHJ31556.1 588 IYERAItALTD 598
                 57886666665 PP

  == domain 6  score: -2.5 bits;  conditional E-value: 5.5
       TPR_7  11 rlGdyeeAielyeq 24 
                 rlG+ ++A  +y  
  KHJ31556.1 614 RLGEIDRARAIYGH 627
                 79999999999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (700 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       473  (0.0263818); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.45
# Mc/sec: 4688.37
//
Query:       KHJ31557.1  [L=240]
Description: putative cutinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.2e-45  153.6   0.1    6.7e-45  153.2   0.1    1.1  1  Cutinase       Cutinase
    9.9e-05   22.2   0.0    0.00018   21.4   0.0    1.4  1  Lipase_3       Lipase (class 3)
     0.0015   18.2   0.0     0.0022   17.6   0.0    1.3  1  DUF2974        Protein of unknown function (DUF2974)
  ------ inclusion threshold ------
      0.025   14.4   0.0       0.04   13.8   0.0    1.3  1  Abhydrolase_3  alpha/beta hydrolase fold
      0.042   13.7   0.0      0.075   12.9   0.0    1.4  1  VirJ           Bacterial virulence protein (VirJ)
      0.067   12.7   0.0        0.1   12.1   0.0    1.2  1  PE-PPE         PE-PPE domain
       0.17   11.2   0.2        1.4    8.2   0.0    2.1  2  LIP            Secretory lipase


Domain annotation for each model (and alignments):
>> Cutinase  Cutinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.2   0.1   2.6e-48   6.7e-45       1     176 [.      66     236 ..      66     238 .. 0.93

  Alignments for each domain:
  == domain 1  score: 153.2 bits;  conditional E-value: 2.6e-48
                 ---SEEEEEE--TT--TTT...SSHHHHHHHHHHHH.TTT-EEEEE------CGGSTTSS-HHHHHHHHHHHHHHHHH-TT-EEEEEEETHHHHHHHHH CS
    Cutinase   1 sckdvevifArgttepggl...gsvGeavvsalesavgsksvavqgvnYpAdleqlyegseeagakeaaalvqslaskCPdtkivlgGYSqGaqvidna 96 
                 +ck+v++ifA+gt+e+g++    s G+a++s+++  +gs+++a+qgv+Y+Ad  ++++g++ +g+k + +l++++a+kCPdtkivl GYSqGaq+++na
  KHJ31557.1  66 PCKPVTLIFAKGTGESGNVggnHSPGPALFSQIRLSMGSQNIAIQGVDYKADIFGYLKGGDPEGSKRYYNLTEEAATKCPDTKIVLTGYSQGAQLAHNA 164
                 5******************765689************************************************************************** PP

                 HTT.....S-HHHHHHEEEEEEES-TTCCCCTTS-TTS-GGGEEEE--TT-GGG.TS----GGGG-GGGG.HHHHHHHHHH CS
    Cutinase  97 ieggatatlpaavadkvaavvlfGdpsnvaglpevsklyaskikslCdagDpiC.gsgneleaHlsYvseyttqaakFvvs 176
                 +       l+ +++++++a+v+fGdp++ + ++ +      k+ ++C++ D+iC g +  ++ Hl+Y+++ + +aa F+++
  KHJ31557.1 165 ARW-----LSVNTTQRISAAVMFGDPYSYDTMGFLPS---TKVLNICHERDVICdGVSGGAAHHLTYARD-APEAARFIMK 236
                 ***.....********************999987666...9*************55555666677****9.999****986 PP

>> Lipase_3  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   7.1e-08   0.00018      58     134 ..     140     209 ..     131     213 .. 0.82

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 7.1e-08
                 HHHHTT-EEEEEEEETHHHHHHHHHHHHHHHTT-SS---EEEEEES----B-HHHHHHHHT-TTEEEEEEEETT--G CS
    Lipase_3  58 llekypeysivvtGHSLGgalAlLaaldlvengenekkkvtvvtfGqPrvgnkefaklvdsqlnkkvlrvvntnDiv 134
                   +k p+++iv+tG S G+ lA  aa +l  n  +  +   +v fG P   ++  + l +     kvl++++++D++
  KHJ31557.1 140 AATKCPDTKIVLTGYSQGAQLAHNAARWLSVNTTQ--RISAAVMFGDPYSYDTM-GFLPS----TKVLNICHERDVI 209
                 667889***************************55..999999*****988753.33333....3488999999987 PP

>> DUF2974  Protein of unknown function (DUF2974)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   8.7e-07    0.0022      77     120 ..     139     183 ..     128     205 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 8.7e-07
     DUF2974  77 kileesegk.iylgGhSkGGnlAvyaamnaeddlqeriskiysfD 120
                 +++++ +++ i+l+G+S+G+ lA+ aa  ++ +  +ris+++ f 
  KHJ31557.1 139 EAATKCPDTkIVLTGYSQGAQLAHNAARWLSVNTTQRISAAVMFG 183
                 5566666655*****************************987663 PP

>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.6e-05      0.04      61     105 ..     138     181 ..     123     196 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.6e-05
                    HTHHHHTETTCEEEEEEETHHHHHHHHHHHHHHHTT---EEEEEE CS
  Abhydrolase_3  61 eqawelgadpsrivlaGdSaGGnlaaavalrardegepkvagqvl 105
                    e+ ++ ++  ++ivl G S G++la+++a+++  + + ++++ v+
     KHJ31557.1 138 EE-AATKCPDTKIVLTGYSQGAQLAHNAARWLSVNTTQRISAAVM 181
                    33.36778899******************9998887777777776 PP

>> VirJ  Bacterial virulence protein (VirJ)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.9e-05     0.075      56     104 ..     135     183 ..      97     190 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.9e-05
        VirJ  56 rlikkyakrwkkkkvvliGysfGaDvlPaaynkLkaatrdkvklvslla 104
                 +l +++a++   +k+vl Gys+Ga +   a + L+ +t ++++++++++
  KHJ31557.1 135 NLTEEAATKCPDTKIVLTGYSQGAQLAHNAARWLSVNTTQRISAAVMFG 183
                 5667778888899****************************99988865 PP

>> PE-PPE  PE-PPE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0     4e-05       0.1      38      92 ..     138     188 ..     128     202 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4e-05
      PE-PPE  38 aairaelaagekvvvfGySqgalvasnekarlaalsepaapdqlsfvlvgnpnrp 92 
                 ++  + ++ + k+v  GySqga  a n+ + l    + ++      v++g+p   
  KHJ31557.1 138 EEAAT-KCPDTKIVLTGYSQGAQLAHNAARWLSV--NTTQ-RISAAVMFGDPYSY 188
                 44444.568999****************999977..4444.33346788888766 PP

>> LIP  Secretory lipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.12     3e+02      44      82 ..      87     125 ..      76     130 .. 0.85
   2 ?    8.2   0.0   0.00054       1.4      68      89 ..     144     165 ..     134     172 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.12
         LIP  44 grqsgkavLdsiraalksekvtgiksdakvalwGYSgGs 82 
                 ++ +g a    ir ++ s++++    d k  ++GY +G+
  KHJ31557.1  87 NHSPGPALFSQIRLSMGSQNIAIQGVDYKADIFGYLKGG 125
                 67788999999*********9887889********9997 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00054
         LIP  68 ksdakvalwGYSgGslAsawAa 89 
                  +d+k++l GYS+G+  +  Aa
  KHJ31557.1 144 CPDTKIVLTGYSQGAQLAHNAA 165
                 589***********96555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1858.98
//
Query:       KHJ31558.1  [L=577]
Description: putative ubiquitin c-terminal hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-51  173.7   0.5    6.1e-51  173.4   0.5    1.1  1  UCH         Ubiquitin carboxyl-terminal hydrolase
    4.3e-14   52.8   8.9    9.3e-14   51.7   8.9    1.6  1  UCH_1       Ubiquitin carboxyl-terminal hydrolase
    4.1e-10   39.3   0.0      1e-09   38.0   0.0    1.7  1  ubiquitin   Ubiquitin family
  ------ inclusion threshold ------
      0.021   14.5   0.7        1.3    8.7   0.0    2.7  3  BAG6        BCL2-associated athanogene 6
       0.13   12.8   2.2       0.33   11.5   2.2    1.7  1  MRFAP1      MORF4 family-associated protein1
       0.21   11.9   0.9          5    7.6   0.1    2.5  2  Bac_RepA_C  Replication initiator protein A C-terminal domain
        0.6    9.7   8.6      0.071   12.7   0.4    2.6  2  DUF4795     Domain of unknown function (DUF4795)
        1.8    8.3   6.8         49    3.7   3.2    3.3  3  SPAM        Salmonella surface presentation of antigen gene t


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.4   0.5   2.7e-54   6.1e-51       2     257 .]     110     562 ..     109     562 .. 0.92

  Alignments for each domain:
  == domain 1  score: 173.4 bits;  conditional E-value: 2.7e-54
                 EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTH........HHHHHHHHHHHHHSH-CCEE--HHHHHHHHHHSGGG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   2 GlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkge........lakalkdlfkellkskskavsPkklkktlsklaksf 92 
                 Gl NlGntCy+ns+lQ+L sipel++ l+++  +++++ ++ ++    +l++ g         ++ +l+dlf+++  ++++ ++P ++++tl+k  ++f
  KHJ31558.1 110 GLLNLGNTCYLNSTLQMLRSIPELQQHLTKYTVSNETNDTS-SI--LRDLSMVGFgnligptdIVLSLRDLFQKMS-ETQEGFQPYAFLNTLRKKFPQF 204
                 9************************8888854444333333.33..23344444245777778999**********.59******************** PP

                 T.......SSSTCEHHHHHHHHHHHHHHHHCCHCCCHHHHHHCCCTTSHHHHHH-EEEEE....................................... CS
                 x.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................................... RF
         UCH  93 s.......gykqqDaqEflaflLdqlhedlnrevaeekwkkhlkrndslitdlfegqlks....................................... 145
                 +       gy qqDa+E ++++++++ e l+        k +++++ s++++ + g+++s                                       
  KHJ31558.1 205 AeksksnnGYAQQDAEEAWSQIVHEIREHLKI-------KLEDNSEISFVDKYMAGSFTSliqcdeqaaldageeateskdsflkldchinaninhlkd 296
                 999***************************98.......8999******************************************************** PP

                 .........................EEEEEEB-SEEEEEEESEEETEE...EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-B............... CS
                 .........................xxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............... RF
         UCH 146 .........................klklkrlPeiLiihlkRfsynss...ksKlntkvefpeeldlssylaeekkkkteekkk............... 201
                                          k +++rlP++L++h+ Rf ++++   k K+ +kv+fp+e d+ +++++e k+k    ++               
  KHJ31558.1 297 gilagleqklektssilsrdttytkKSQISRLPKYLTVHFVRFFWKREsqkKVKIMRKVTFPDEFDVVEFCTDELKNKLIPIRDkvreirkdeedmera 395
                 *********************************************99999999*******************999988776666999************ PP

                 ...........................................................................................EEEEEEEE CS
                 ...........................................................................................xxxxxxxx RF
         UCH 202 ...........................................................................................YeLiavvv 209
                                                                                                            YeL ++v 
  KHJ31558.1 396 rkrqkriddkkivdeisgrvnstsnaaydptkhpktnnsdpvknpveevvcksdaeidaeriaaiisakkevhslvesqnfsddganksglYELRGIVT 494
                 *************************************************************************************************** PP

                 EES.CTTSEEEEEEEE............CTTTTEEEEEETTEEEEE-HHCCCTT........CEEEEEE CS
                 xxx.xxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxx RF
         UCH 210 HsG.slssGHYvayik............nekngkWykydDetvkevkeeeevls........sayiLfY 257
                 H+G s+++GHY+++ik            + ++gkW+ ++D++v+ev+++ ++++        sa iL+Y
  KHJ31558.1 495 HQGaSADGGHYTSFIKkqgpldlktgkrDAEDGKWWWFNDDKVSEVEAD-KIKTlagggeshSALILLY 562
                 *************999565555555544445555*************76.99999999999******99 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   8.9   4.1e-17   9.3e-14       1     319 [.     109     536 ..     109     537 .. 0.74

  Alignments for each domain:
  == domain 1  score: 51.7 bits;  conditional E-value: 4.1e-17
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxx.xx.xxxxxxxxxxxx.xxxx.xxx RF
       UCH_1   1 sGLEnhivnsYlNslLQvlyfipplr.nlalshlakeckkehcLlcElgflf...............dmldkak.gl.ncqasnFlrals.sipe.asa 79 
                 +GL n  +++YlNs LQ+l+ ip+l+ +l +  +++e ++ +++l +l ++                d  +k + ++   q   Fl++l+ ++p+ a++
  KHJ31558.1 109 AGLLNLGNTCYLNSTLQMLRSIPELQqHLTKYTVSNETNDTSSILRDLSMVGfgnligptdivlslrDLFQKMSeTQeGFQPYAFLNTLRkKFPQfAEK 207
                 7999999*******************5555555566888888888888877667777777777777755555443333799999999999534542222 PP

                 xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  80 lglileee.eetekssaislssliqsfnrflldqlekelketkknsseeesaieqllgtkaettirclkCgsek.srksstlvldlkyPkpsnekkeak 176
                  +   ++  ++  ++++++ s+++ ++ + l  +le++++ +  ++  + s +++l++++ +     l+ g+e  + k+s+l ld     +  + ++ k
  KHJ31558.1 208 SKS--NNGyAQ--QDAEEAWSQIVHEIREHLKIKLEDNSEISFVDKYMAGS-FTSLIQCDEQAA---LDAGEEAtESKDSFLKLDCHI--N-ANINHLK 295
                 222..222122..25566778888888888887877776665543333333.554553333333...345555548888888888855..3.3333444 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................................... RF
       UCH_1 177 vtfasilksslerekttrawCekCkryqpteqrktvknlPpvLalnakleeeeelelwkt....................................... 236
                   +   l+++le+      + ++ +r ++ ++++++ +lP+ L+++  ++      +wk+                                       
  KHJ31558.1 296 DGILAGLEQKLEK------TSSILSRDTTYTKKSQISRLPKYLTVHFVRF------FWKResqkkvkimrkvtfpdefdvvefctdelknklipirdkv 382
                 4555566666655......677789999******************9976......333333344555666**************************** PP

                 ..................................................................xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 237 ..................................................................knwlp.leiklsldedknleeklkeerekakae 268
                                                                                   +  ++ ++i+++++ +k++++  ++++ +++  
  KHJ31558.1 383 reirkdeedmerarkrqkriddkkivdeisgrvnstsnaaydptkhpktnnsdpvknpveevvcksDAEIDaERIAAIISAKKEVHSLVESQNFSDDGA 481
                 *********************99999999999999999999999999999999999999988888745555588888888888889999999999999* PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxx RF
       UCH_1 269 keikvYeLqsvvvhigdskesghLvslvkvaekeler....dppesqWylFNDfl 319
                 +++  YeL+++v h g s + gh+ s++k + ++  +    d+++++W  FND +
  KHJ31558.1 482 NKSGLYELRGIVTHQGASADGGHYTSFIKKQGPLDLKtgkrDAEDGKWWWFNDDK 536
                 ****************9999*********76665554788677777*******66 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.0   0.0   4.6e-13     1e-09       1      70 [.       6      74 ..       6      76 .. 0.95

  Alignments for each domain:
  == domain 1  score: 38.0 bits;  conditional E-value: 4.6e-13
                EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEES CS
   ubiquitin  1 itvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlr 70
                +++k  +gkk+++++++ +  e +K ++ + +g+++e+q+++ +G +L+d+  l+ +g ++g + + + +
  KHJ31558.1  6 VFIK-HQGKKYEVDLDPGTLGEVFKLQVFSLTGVQPERQKILVKGGQLKDDTDLSKIGAKPGQVFMIMGT 74
                6899.69*********************************************************999975 PP

>> BAG6  BCL2-associated athanogene 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1     0.026        59       1      45 [.     174     217 ..     174     235 .. 0.62
   2 ?   -4.3   0.0       6.3   1.4e+04      19      35 ..     306     322 ..     305     325 .. 0.78
   3 ?    8.7   0.0   0.00058       1.3      10      62 ..     370     422 ..     363     424 .. 0.94

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.026
        BAG6   1 laevlqelrevqerlePfleryieileedptfeesdntegreeaq 45 
                 l++++q+++e+qe ++P+     ++ ++ p+f e++++++   +q
  KHJ31558.1 174 LRDLFQKMSETQEGFQPYAF-LNTLRKKFPQFAEKSKSNNGYAQQ 217
                 6789*************852.222333445555555554444444 PP

  == domain 2  score: -4.3 bits;  conditional E-value: 6.3
        BAG6  19 leryieileedptfees 35 
                 le++ +il+ d+t +++
  KHJ31558.1 306 LEKTSSILSRDTTYTKK 322
                 57888999999997765 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.00058
        BAG6  10 evqerlePfleryieileedptfeesdntegreeaqrildrvsEalhllshal 62 
                 e++++l P  ++ +ei +++ ++e   + ++r ++ +i+d +s  + + s+a 
  KHJ31558.1 370 ELKNKLIPIRDKVREIRKDEEDMERARKRQKRIDDKKIVDEISGRVNSTSNAA 422
                 7899***************************************9999999985 PP

>> MRFAP1  MORF4 family-associated protein1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   2.2   0.00015      0.33      14      95 ..     369     447 ..     352     475 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00015
      MRFAP1  14 edpesllsPvlrevrediaalereharaylrarrklleidslldeikseveaseesaldparsPgaeaeervaklcakaerk 95 
                 ++ ++ l P+  +vre i   e +  ra  r r+k ++ ++++dei  +v++  ++a dp + P+++  + v    +++  k
  KHJ31558.1 369 DELKNKLIPIRDKVRE-IRKDEEDMERA--RKRQKRIDDKKIVDEISGRVNSTSNAAYDPTKHPKTNNSDPVKNPVEEVVCK 447
                 4567788888888887.55556666666..8899999***************************999887777666665444 PP

>> Bac_RepA_C  Replication initiator protein A C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.1    0.0022         5      35      90 ..     206     260 ..     192     263 .. 0.85
   2 ?    2.1   0.1      0.11   2.5e+02      32      77 ..     344     388 ..     320     397 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0022
  Bac_RepA_C  35 kaervlgvailldeeelqelitktLrrffnslrisknkkvknvenYlmrtlknlFe 90 
                 ++++  + +   d ee  ++i +++r  +++   ++n ++  v++Y+ +++++l +
  KHJ31558.1 206 EKSKSNNGYAQQDAEEAWSQIVHEIREHLKIKL-EDNSEISFVDKYMAGSFTSLIQ 260
                 44455678889999************9998766.****************999865 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.11
  Bac_RepA_C  32 avekaervlgvailldeeelqelitktLrrffnslrisknkkvknv 77 
                 +++k+ + + +++++de+++ e  t +L+ ++  +r +k +++++ 
  KHJ31558.1 344 ESQKKVKIMRKVTFPDEFDVVEFCTDELKNKLIPIR-DKVREIRKD 388
                 5566667778999******************99999.777776654 PP

>> DUF4795  Domain of unknown function (DUF4795)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.4   3.2e-05     0.071      77     175 ..     177     285 ..     173     287 .. 0.78
   2 ?    0.0   2.2      0.24   5.5e+02      86     116 ..     364     397 ..     285     444 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.2e-05
     DUF4795  77 Latkvsrdq..fDea..kkeLekmleellekle........eqeealkkaldtLqeelkekld.rlelepLkeqleerlkelqkelqeamekedkedea 162
                 L +k+s++q  f+ +  ++ L+k++ +  ek++         +eea+ +++ +++e lk kl+   e++ + +++ + + +l  + +e+++ +   +ea
  KHJ31558.1 177 LFQKMSETQegFQPYafLNTLRKKFPQFAEKSKsnngyaqqDAEEAWSQIVHEIREHLKIKLEdNSEISFVDKYMAGSFTSLI-QCDEQAALDA-GEEA 273
                 556666666666643226889999999999977888888889********************9899*********99999988.6677766665.4678 PP

     DUF4795 163 aglrkkLlerfdc 175
                  + +   l ++dc
  KHJ31558.1 274 TESKDSFL-KLDC 285
                 88887776.6665 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.24
     DUF4795  86 fDeakkeLekmleellekle...eqeealkkald 116
                 +++ ++eL+++l ++++k+    + ee++++a +
  KHJ31558.1 364 VEFCTDELKNKLIPIRDKVReirKDEEDMERARK 397
                 6777888888888888886655567777777655 PP

>> SPAM  Salmonella surface presentation of antigen gene type M protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.21   4.7e+02      25      50 ..     262     287 ..     255     323 .. 0.76
   2 ?    3.7   3.2     0.022        49      75     114 ..     366     405 ..     341     408 .. 0.87
   3 ?    2.8   0.0     0.041        93      25      66 ..     447     489 ..     443     496 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.21
        SPAM  25 deereldkeeeaieeqragLkeLLdl 50 
                 de++ ld+ eea e+++  Lk+  ++
  KHJ31558.1 262 DEQAALDAGEEATESKDSFLKLDCHI 287
                 67789************999975544 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.022
        SPAM  75 rqlkeLeLqlvaiqekrselqkekeelskkskyWLrkedk 114
                     eL+ +l++i++k +e++k+ e++++ +k   r +dk
  KHJ31558.1 366 FCTDELKNKLIPIRDKVREIRKDEEDMERARKRQKRIDDK 405
                 55679999********************999988887776 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.041
        SPAM  25 deereldkee.eaieeqragLkeLLdlqrpegksldreelyal 66 
                 + ++e+d+e+  ai + +++++ L++ q   +   ++++ly l
  KHJ31558.1 447 KSDAEIDAERiAAIISAKKEVHSLVESQNFSDDGANKSGLYEL 489
                 67999**998457999***************999*******87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (577 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       964  (0.0537676); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 4226.22
//
Query:       KHJ31559.1  [L=597]
Description: putative choline kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-63  214.1   0.1    2.6e-63  213.5   0.1    1.3  1  Choline_kinase  Choline/ethanolamine kinase
    1.7e-09   37.2   0.1    3.8e-09   36.1   0.1    1.6  1  Choline_kin_N   Choline kinase N terminus
     0.0013   18.7   0.1     0.0057   16.6   0.1    2.0  1  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Choline_kinase  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.5   0.1   4.3e-67   2.6e-63       3     212 ..     156     404 ..     154     405 .. 0.96

  Alignments for each domain:
  == domain 1  score: 213.5 bits;  conditional E-value: 4.3e-67
                     SEEEEEEE-TTCTTCCHHHHHHHHHHHHHHTTSSS-EEEEETTEEEEE--TCEE--TTGGGCHHHHHHHHHHHHHHTTCHH...TTSSSS-HHHH CS
  Choline_kinase   3 kkvllRiygkkteelidretElvvfallserglgpklygifenGrieefiesrtlstedlrepeiskkiAkklaelHslel..eseskespslwk 95 
                      k llRiyg++ ++lidre+El ++++l+++++gpk++g+f+nGr+ee+++++tl +ed+r+ ++sk+iAk+++elH+ +   e+e++e p++w+
      KHJ31559.1 156 DKALLRIYGHQFNQLIDRENELRILKRLAQKNIGPKVLGTFKNGRFEEYFHAKTLGAEDIRNIDTSKQIAKRMRELHDGVEllEQERNEGPFVWR 250
                     689***************************************************************************9988999********** PP

                     HHHHH..............HHCCS.TT..ECHHGGCCHCCCTHHHHHHHHHTHHHHHH......CHGG-EEEE-S--SGGGEEE........... CS
  Choline_kinase  96 tmqkw..............llnkeaqtkakkekkkkqlklinledlekelekleklle......elespvvfcHnDlqegNill........... 159
                     +++kw              ++ +e++   +++k++  ++ +++ ++++ +ek++k+l+      ++++++vf+HnD+q+gNil            
      KHJ31559.1 251 NWDKWidrceeimkilddsVRTHEQHGILRNWKTRGFVCGVEWPQFKSAAEKYRKWLNdycgkeNIRQNLVFAHNDTQYGNILRllpenhvasft 345
                     **************888876777777778899*************************779999999999************************** PP

                     .......-CTTEEEE--GTT-EEEEHHHHHHHHHHHTTEEHHHCSTSHEE-GGGS--HH CS
  Choline_kinase 160 ......nkeekklvlIDFEYagynyrgfDlanhfiEwagdyeeeeaffkldyskypsre 212
                           +++ k+lv+IDFEYa++n+ g +lanhf+Ew+++y++++ +  +d++kyps e
      KHJ31559.1 346 pppllpDNTYKNLVFIDFEYASANTPGLELANHFSEWCYNYHSPTKPWLCDTKKYPSLE 404
                     ********************************************************977 PP

>> Choline_kin_N  Choline kinase N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.1   6.3e-13   3.8e-09       8      49 ..      43     113 ..      41     115 .. 0.96

  Alignments for each domain:
  == domain 1  score: 36.1 bits;  conditional E-value: 6.3e-13
  Choline_kin_N   8 elvpsvdavLDnskpsdy.............................FKeeilrLlhtLalkgWrdvplda 49 
                    e+vp++d+ LDns + ++                             FK eil+L++ L+l gW ++p ++
     KHJ31559.1  43 EVVPFCDVYLDNSNTISLllrptdptpsnysldlkskpdknlthwidFKTEILKLAQNLKLDGWQNIPVEC 113
                    89*************999*************************************************9887 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   9.5e-07    0.0057       5     213 ..     142     383 ..     120     392 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 9.5e-07
                 E--.SSCEEEEEEETT--EEEEEE-TT.S-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SSHHHHHHHHHHHHHHHHHH CS
         APH   5 lsggasnrtylvttpagryvlrrnppa.raaeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllrklsaaqlpellealgefl 102
                 +s+g +++  +   ++ + +lr++ ++     + ++e+++l+ La+ ++  P+vl + +++ ++++  +    ++++++++ ++ +q+ +  ++l++  
  KHJ31559.1 142 ISSGHEDQHAK--NSSDKALLRIYGHQfNQLIDRENELRILKRLAQKNI-GPKVLGTFKNGRFEEY--FHAKTLGAEDIRNIDTSKQIAKRMRELHDGV 235
                 55555553333..33347899******99999999**************.99***98877777775..4445555555555333888888888888888 PP

                 CCHHCH.-STTTB-SHHCHTCCHHHHHHCHHHCCCGCCTCCHHHHHHHH.................HHHHHHHH--S........SS-EEEE-SS-SGG CS
         APH 103 aalhqvdpaalpladflaqdlellrqlesatarllaselldlleeleeq.................vlaalaallpg........elptvllHgDlhpg 176
                   l q   ++ +++ ++ +d + +r +e  +  ++  ++++ +  + ++                 ++++ ++ l +         +  v+ H+D   g
  KHJ31559.1 236 ELLEQE--RNEGPFVWRNWDKWIDRCEEIMKILDDSVRTHE-QHGILRNwktrgfvcgvewpqfksAAEKYRKWL-NdycgkeniRQNLVFAHNDTQYG 330
                 888888..777777777677777755554444555555555.555555566677777776666664222222222.2466679999************* PP

                 GEEEC....................TTEEEEE---TT-EEEECCHHHHCCHHHCS CS
         APH 177 Nllvd..................pddgrvtGviDfedaglgpplyDlavllrswt 213
                 N+l                      ++ v  +iDfe+a++  p  +la +   w+
  KHJ31559.1 331 NILRLlpenhvasftpppllpdnTYKNLV--FIDFEYASANTPGLELANHFSEWC 383
                 ********************765556667..******************995588 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (597 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.38
# Mc/sec: 4655.87
//
Query:       KHJ31560.1  [L=381]
Description: putative c2h2 type zinc finger containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.8e-06   25.9  12.4    0.00063   20.1   2.2    3.7  5  zf-C2H2      Zinc finger, C2H2 type
    0.00085   19.7   1.7    0.00085   19.7   1.7    4.5  5  zf-H2C2_2    Zinc-finger double domain
  ------ inclusion threshold ------
      0.018   15.0   0.9      0.018   15.0   0.9    2.3  2  zf-C2H2_6    C2H2-type zinc finger
      0.064   13.7   6.2      0.097   13.1   1.6    3.3  3  zf-met       Zinc-finger of C2H2 type
        0.1   12.9   0.4        0.1   12.9   0.4    3.1  3  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
       0.29   11.3   1.6        4.9    7.4   0.1    2.5  2  Zn-ribbon_8  Zinc ribbon domain
        7.4    7.7  27.5       0.15   13.0   1.7    3.9  4  zf-C2H2_4    C2H2-type zinc finger


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.5   3.2         7   1.8e+04      13      20 ..      18      25 ..      17      26 .. 0.75
   2 ?   -3.5   0.0         7   1.8e+04      13      20 ..     192     199 ..     190     200 .. 0.74
   3 ?   -3.6   0.1         7   1.8e+04       9      16 ..     210     217 ..     209     218 .. 0.85
   4 !   20.1   2.2   2.5e-07   0.00063       1      23 []     323     345 ..     323     345 .. 0.95
   5 !   19.0   2.8   5.4e-07    0.0014       1      23 []     351     376 ..     351     376 .. 0.96

  Alignments for each domain:
  == domain 1  score: -6.5 bits;  conditional E-value: 7
                HHHHHHHH CS
     zf-C2H2 13 ksnLkrHi 20
                + nL +H 
  KHJ31560.1 18 QQNLHNHH 25
                67899995 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 7
                 HHHHHHHH CS
     zf-C2H2  13 ksnLkrHi 20 
                   +Lk+H 
  KHJ31560.1 192 EFSLKNHT 199
                 56899995 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 7
                 EESSHHHH CS
     zf-C2H2   9 sFkrksnL 16 
                 sF +k++L
  KHJ31560.1 210 SFENKYSL 217
                 89999998 PP

  == domain 4  score: 20.1 bits;  conditional E-value: 2.5e-07
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 y C  C+k F+r+s+L+ H  +H
  KHJ31560.1 323 YICQTCNKAFSRPSSLRIHSHSH 345
                 89*****************8887 PP

  == domain 5  score: 19.0 bits;  conditional E-value: 5.4e-07
                 EEET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                 +kCp  +Cgk F+ +sn+krH r  H
  KHJ31560.1 351 FKCPhvGCGKAFSVRSNMKRHERGcH 376
                 89*******************99888 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.43   1.1e+03       9      20 ..      67      80 ..      65      82 .. 0.80
   2 ?   -4.2   0.9         7   1.8e+04       7      15 ..     238     246 ..     234     247 .. 0.65
   3 ?    4.5   0.1      0.02        51      15      25 ..     323     333 ..     305     334 .. 0.86
   4 !   19.7   1.7   3.3e-07   0.00085       2      25 ..     338     363 ..     337     363 .. 0.91
   5 ?   -0.8   0.1      0.94   2.4e+03       1      10 [.     367     377 ..     367     379 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.43
   zf-H2C2_2  9 Htgekpy..eCplC 20
                Ht+++p+  e p+C
  KHJ31560.1 67 HTPPSPLadESPKC 80
                9*****98966666 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 7
   zf-H2C2_2   7 rkHtgekpy 15 
                 ++H+  +p+
  KHJ31560.1 238 ASHHRLSPF 246
                 489977776 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.02
   zf-H2C2_2  15 yeCplCdkaFk 25 
                 y C  C+kaF+
  KHJ31560.1 323 YICQTCNKAFS 333
                 66********8 PP

  == domain 4  score: 19.7 bits;  conditional E-value: 3.3e-07
   zf-H2C2_2   2 LrrHirkHtgekpyeCp..lCdkaFk 25 
                 Lr H  +Htg kp++Cp   C+kaF+
  KHJ31560.1 338 LRIHSHSHTGAKPFKCPhvGCGKAFS 363
                 88899************977****95 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 0.94
   zf-H2C2_2   1 nLrrHirk.Ht 10 
                 n +rH r  H 
  KHJ31560.1 367 NMKRHERGcHS 377
                 679**995485 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.9     7e-06     0.018       1      24 [.     322     345 ..     322     347 .. 0.93
   2 ?   -3.1   0.2       3.4   8.6e+03       7      12 ..     358     363 ..     358     363 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 7e-06
   zf-C2H2_6   1 vheCsvCsksFpslqaLggHkksH 24 
                 +++C++C+k F+   +L+ H  sH
  KHJ31560.1 322 RYICQTCNKAFSRPSSLRIHSHSH 345
                 59****************999888 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 3.4
   zf-C2H2_6   7 CsksFp 12 
                 C+k F+
  KHJ31560.1 358 CGKAFS 363
                 ****96 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.56   1.4e+03      11      22 ..     190     201 ..     188     202 .. 0.84
   2 ?   13.1   1.6   3.8e-05     0.097       1      19 [.     323     341 ..     323     345 .. 0.89
   3 ?   -0.2   0.0      0.59   1.5e+03       6      22 ..     358     374 ..     358     374 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.56
      zf-met  11 nsesqlksHlqG 22 
                 + e +lk+H  +
  KHJ31560.1 190 STEFSLKNHTES 201
                 6799*****987 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 3.8e-05
      zf-met   1 fyCelCnvtfnsesqlksH 19 
                 + C  Cn+ f+ +s+l+ H
  KHJ31560.1 323 YICQTCNKAFSRPSSLRIH 341
                 78***************** PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.59
      zf-met   6 CnvtfnsesqlksHlqG 22 
                 C + f+ +s++k H +G
  KHJ31560.1 358 CGKAFSVRSNMKRHERG 374
                 6677777899****998 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       1.4   3.6e+03      13      22 ..     191     200 ..     189     201 .. 0.78
   2 ?   12.9   0.4     4e-05       0.1       2      20 ..     323     341 ..     322     345 .. 0.90
   3 ?    0.8   0.3      0.24   6.3e+02       7      23 ..     358     374 ..     350     376 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.4
                  SHHHHHCCTT CS
  zf-C2H2_jaz  13 senaldnHlk 22 
                  +e +l+nH  
   KHJ31560.1 191 TEFSLKNHTE 200
                  78899***75 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 4e-05
                  CBBTTTTBBBSSHHHHHCC CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnH 20 
                  + C++C+K F+  ++l+ H
   KHJ31560.1 323 YICQTCNKAFSRPSSLRIH 341
                  89*************9988 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.24
                  TTBBBSSHHHHHCCTTS CS
  zf-C2H2_jaz   7 CdKyFksenaldnHlkS 23 
                  C K F+  ++++ H+++
   KHJ31560.1 358 CGKAFSVRSNMKRHERG 374
                  9999999999****997 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.1    0.0019       4.9       6      31 ..     323     355 ..     322     357 .. 0.82
   2 ?    4.3   0.4     0.018        45       6      29 ..     351     375 ..     350     380 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0019
  Zn-ribbon_8   6 YrCeeCghefe.....vlqsis.daplta.CPe 31 
                  Y C+ C++ f      +++s s   +++  CP+
   KHJ31560.1 323 YICQTCNKAFSrpsslRIHSHShTGAKPFkCPH 355
                  99*********9999877777767778888987 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.018
  Zn-ribbon_8   6 YrCee..Cghefevlqsisdaplta.C 29 
                  ++C    Cg+ f v+  +++ +    C
   KHJ31560.1 351 FKCPHvgCGKAFSVRSNMKRHE--RgC 375
                  7899888********9999533..336 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -8.0   5.2         7   1.8e+04      15      23 ..      20      26 ..      17      27 .. 0.55
   2 ?   -2.6   0.0         6   1.5e+04      11      19 ..     190     198 ..     188     201 .. 0.75
   3 ?   13.0   1.7   5.7e-05      0.15       1      23 [.     323     345 ..     323     346 .. 0.94
   4 ?   13.0   2.7   5.8e-05      0.15       1      24 []     351     376 ..     351     376 .. 0.93

  Alignments for each domain:
  == domain 1  score: -8.0 bits;  conditional E-value: 7
   zf-C2H2_4 15 aLlrHlkth 23
                +L +H   h
  KHJ31560.1 20 NLHNH--HH 26
                46666..34 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 6
   zf-C2H2_4  11 sskkaLlrH 19 
                 s+  +L++H
  KHJ31560.1 190 STEFSLKNH 198
                 677889999 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 5.7e-05
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 ++C  C+k Fs++++L+ H  +h
  KHJ31560.1 323 YICQTCNKAFSRPSSLRIHSHSH 345
                 89*****************9888 PP

  == domain 4  score: 13.0 bits;  conditional E-value: 5.8e-05
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkthH 24 
                 fkCp+  Cgk Fs +++++rH +  H
  KHJ31560.1 351 FKCPHvgCGKAFSVRSNMKRHERGCH 376
                 89**********99999****99877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       917  (0.0511462); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.45
# Mc/sec: 2555.08
//
Query:       KHJ31561.1  [L=115]
Description: hypothetical protein EV44_g3745 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       615  (0.034302); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 912.87
//
Query:       KHJ31562.1  [L=1558]
Description: putative gtpase activating protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      8e-44  149.9   0.1      8e-44  149.9   0.1    2.5  3  RabGAP-TBC    Rab-GTPase-TBC domain
    1.9e-06   27.9  23.9    1.9e-06   27.9  23.9    6.4  6  Trypan_PARP   Procyclic acidic repetitive protein (PARP)


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.9   0.1   8.9e-48     8e-44       3     214 ..     184     383 ..     182     384 .. 0.90
   2 ?   -6.0   3.7         2   1.8e+04      20      59 ..     601     641 ..     586     667 .. 0.54
   3 ?   -3.1   1.1      0.56     5e+03      20      57 ..     697     735 ..     688     751 .. 0.67

  Alignments for each domain:
  == domain 1  score: 149.9 bits;  conditional E-value: 8.9e-48
  RabGAP-TBC   3 lRgevWklllgyepevkrlkksekkqeksekeksklekseeskelsqIkkDvprtfp..esesfknkqgqnqLeriLkaysiynpevgYcqGmndivap 99 
                 lRg vW++++g+++            e ++++++   k++ +   + ++ D    fp  +++++ +++gq++L+r+Lk +s+y++++gY  G+ +i++p
  KHJ31562.1 184 LRGIVWQTISGARD-----------TELESFYDRVSMKQTFN--KEIVDDDPLYIFPgvDTFRDPQGDGQQMLKRVLKSFSLYDKKIGYYRGLAYIAGP 269
                 8***********54...........44455555555555544..47899********877799999********************************* PP

  RabGAP-TBC 100 lllvsldeeeaFwcfvsLlekyklrdlytsslpglkrklkvleellkkkdpklykhlkeegldlelfaikwfltlflrefpletvlrlwD.lllegekf 197
                 ll +++ e++aF+++v+L+++y+l++++ ++++gl+ ++++ ++llk++ p l+khl++++++++ ++i+wfl  f+++ pl +++r++D ++ eg ++
  KHJ31562.1 270 LL-IYMGEKQAFCVLVRLMNNYNLKEIFYPDFSGLNLRVYQYQKLLKQHAPILSKHLDDLQIEPT-YTIQWFLSFFATTCPLPMLFRIYDvIFTEGVSI 366
                 **.7778888****************************************************887.8***********************7777999** PP

  RabGAP-TBC 198 vllrvalailklleeel 214
                 +++r+al++++++e ++
  KHJ31562.1 367 TVMRIALSLMSKNERKI 383
                 **********9999887 PP

  == domain 2  score: -6.0 bits;  conditional E-value: 2
  RabGAP-TBC  20 rlkksekkqeksekeksklekseeskelsqIk.kDvprtfp 59 
                 r+ + e+++ +s  ++  ++++e+++ ++qIk   ++  ++
  KHJ31562.1 601 RQLEIESSKSQSFGTQFLEQSHEIENLQKQIKeVHLHIRHS 641
                 44444555555555555555555555566665222222222 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 0.56
  RabGAP-TBC  20 rlkksekkqeksekeksklekseeskelsqIk.kDvprt 57 
                 + kk++++   ++ +k++  ++++s++ +qI+  D +  
  KHJ31562.1 697 EPKKFQNEASSNNPSKKDAITNSSSNNVNQINsSDTNSK 735
                 345566666667777777777777888899987777655 PP

>> Trypan_PARP  Procyclic acidic repetitive protein (PARP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.6      0.35   3.1e+03      78     113 ..     819     853 ..     780     860 .. 0.49
   2 !   27.9  23.9   2.2e-10   1.9e-06      59     113 ..    1048    1102 ..    1026    1112 .. 0.52
   3 ?   -0.4   8.7      0.12   1.1e+03      51     109 ..    1184    1249 ..    1156    1259 .. 0.45
   4 ?   -6.5  12.1         2   1.8e+04      63     113 ..    1233    1294 ..    1209    1308 .. 0.45
   5 ?  -10.9  15.8         2   1.8e+04      63      91 ..    1282    1309 ..    1260    1361 .. 0.50
   6 ?   -0.6   0.5      0.14   1.2e+03      82     100 ..    1522    1540 ..    1470    1547 .. 0.62

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.35
  Trypan_PARP  78 epetepeeepepepepepepepepepepepepepga 113
                  e++ +  e   p++e +  p ++p+p+ + e  p a
   KHJ31562.1 819 ENNLSQSEVISPNTEVKEIPTSNPKPQ-KTEYIPRA 853
                  222333333344444444444444443.23444445 PP

  == domain 2  score: 27.9 bits;  conditional E-value: 2.2e-10
  Trypan_PARP   59 pepepepepepepepepepepetepeeepepepepepepepepepepepepepga 113 
                      ep pep pep pep pep +ep +ep pep  ep  ep pep p+pe +p  
   KHJ31562.1 1048 QVSEPAPEPAPEPAPEPAPEPASEPAHEPAPEPASEPASEPAPEPAPQPESQPAP 1102
                   3334444444444444444444444444444444444444444444444444433 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.12
  Trypan_PARP   51 dddtngtdpepepepepepepepepepep...etepeeepe........pepepepepepepepepepep 109 
                   +  ++ t+++p+pep p p         +   + e + +++          ++p+p p p p p + p p
   KHJ31562.1 1184 AKTSQVTESKPKPEPMPTPMSA----DTNfntKVETKTTTPafglggffSASKPQPTPIPTPTPTATPAP 1249
                   3333344444444444444322....11121122222222101111111233444444444444444444 PP

  == domain 4  score: -6.5 bits;  conditional E-value: 2
  Trypan_PARP   63 pepepepepepepepep.....etepeeepepe.pepepe.....pepepepepepepepga 113 
                   p+p p p p p + p p     +t+ + + e + + p          ++p+p p p p p a
   KHJ31562.1 1233 PQPTPIPTPTPTATPAPantnsNTNSNTKVETKtTTPAFGlggffSASKPQPTPIPTPTPTA 1294
                   33333333333333333223221222211111101121111111123334444444444433 PP

  == domain 5  score: -10.9 bits;  conditional E-value: 2
  Trypan_PARP   63 pepepepepepepepep.......etepeeepepep 91  
                   p+p p p p p + p p       +         ++
   KHJ31562.1 1282 PQPTPIPTPTPTATPAPantnsntN--------SNT 1309
                   3333333333333333321212121........111 PP

  == domain 6  score: -0.6 bits;  conditional E-value: 0.14
  Trypan_PARP   82 epeeepepepepepepepe 100 
                   +pe   ++ pep+p p ++
   KHJ31562.1 1522 KPETMKPQVPEPNPIPPSN 1540
                   2333333333333333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1558 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2440  (0.136092); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                       102  (0.00568911); expected 17.9 (0.001)
Passed Fwd filter:                        43  (0.00239835); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.58u 0.38s 00:00:01.96 Elapsed: 00:00:00.61
# Mc/sec: 7729.39
//
Query:       KHJ31563.1  [L=1349]
Description: putative tubulin-specific chaperone [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.4e-14   52.5   2.3    2.5e-13   50.3   1.4    2.8  2  TFCD_C         Tubulin folding cofactor D C terminal
  ------ inclusion threshold ------
       0.01   16.2   1.9        2.2    8.7   0.1    4.6  4  HEAT_2         HEAT repeats
        0.1   11.9   0.0       0.21   10.8   0.0    1.4  1  Peptidase_C30  Coronavirus  endopeptidase C30
       0.15   12.3   6.0       0.42   10.9   0.1    3.5  4  MSV199         MSV199 domain
        0.3   11.4   6.6         48    4.6   0.0    5.9  6  HEAT           HEAT repeat


Domain annotation for each model (and alignments):
>> TFCD_C  Tubulin folding cofactor D C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.9   6.7e+03      18      46 ..     658     685 ..     630     723 .. 0.65
   2 !   50.3   1.4   6.9e-17   2.5e-13       2     187 ..    1067    1258 ..    1066    1260 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.9
      TFCD_C  18 vRavAgkvlqrllhndpakipsiphreel 46 
                 vR v +kvl +l+++++++ +   h e l
  KHJ31563.1 658 VRRVVAKVLGQLIWAKQCR-TGQLHNESL 685
                 6777777777777777774.333344333 PP

  == domain 2  score: 50.3 bits;  conditional E-value: 6.9e-17
      TFCD_C    2 kiigallkqavEKiDrvRavAgkvlqrllhndpakipsiphreelekifpeeeeedlnwnspsevfprlvqLLqlpeyresv........leGlvvS 90  
                  k++  ll++a+E++DrvR +A k l+ +   + +  +s++  ++l+++            s+++++++l+++ q ++y  ++        ++G+v+S
  KHJ31563.1 1067 KLVPRLLRLAAERLDRVRTEAKKSLVFISSLR-C--KSFQIFSRLTSLSV----------SSKTYYQCLLEI-QCEQYPPHIyqylfnryMSGYVTS 1149
                  68999*******************88776665.4..56666666655544..........447788888888.88888888888888888******* PP

      TFCD_C   91 vGglteslvkassqaLleyl........keleskadeeele.........slleeliklleenkkddRvvvPllktldlLlesgvleelaeees.sf 169 
                  ++g++e+++ as++aL++++        +      d+++++          +++ l+++    +k++R++v++l++l++L++ g +++ +  +   +
  KHJ31563.1 1150 ADGGSEDVISASRSALVDFIsgsskissD----LMDQSFIDinnynskdsYIFSALLQVI--SLKSQRIYVSALEILAFLISLGTFDRQILLNGiCI 1240
                  ********************665444330....223333334444444559999999999..6899*********************9988886667 PP

      TFCD_C  170 lekllkllqkelkksknv 187 
                  l+k+ k+l k + ++k++
  KHJ31563.1 1241 LDKVDKILAKSADNIKQI 1258
                  778877777777777766 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.33   1.2e+03      31      58 ..     360     387 ..     326     408 .. 0.74
   2 ?   -0.0   0.0      0.33   1.2e+03      33      58 ..     568     593 ..     566     605 .. 0.71
   3 ?    8.7   0.1   0.00062       2.2      15      58 ..     617     669 ..     606     679 .. 0.81
   4 ?    0.5   0.0      0.23   8.4e+02      30      58 ..    1066    1094 ..    1033    1103 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.33
      HEAT_2  31 ealpaLvellededpavRraaaeaLgai 58 
                  ++ +++e+++d  + +R aa +aL+ i
  KHJ31563.1 360 NIIGYMLEVVSDLATPIRLAASKALSVI 387
                 5678899999999999********9855 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.33
      HEAT_2  33 lpaLvellededpavRraaaeaLgai 58 
                 l++L+++  d+  ++Rr a  aL ++
  KHJ31563.1 568 LDLLISATLDPAGNIRRGASAALQEL 593
                 67777777777778888877777664 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.00062
      HEAT_2  15 evrraairaLg.......rignpealpaLvell..ededpavRraaaeaLgai 58 
                 ++r++ai++ +       ++ ++ +++ L+++l  +++d  vRr +a+ Lg++
  KHJ31563.1 617 ALRIRAIEVVAleasslsDQYETAIVEKLLSWLgiRNPDKFVRRVVAKVLGQL 669
                 5788999999987774444444589********99999999**********86 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.23
      HEAT_2   30 pealpaLvellededpavRraaaeaLgai 58  
                  ++++p L++l+     +vR +a ++L+ i
  KHJ31563.1 1066 EKLVPRLLRLAAERLDRVRTEAKKSLVFI 1094
                  46788888888888888888888888766 PP

>> Peptidase_C30  Coronavirus  endopeptidase C30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0     6e-05      0.21      29      80 ..    1094    1145 ..    1083    1157 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 6e-05
                     HHTSTGGGEEEEETTEEEEEEEEEEETTEEEEEESSEETT--SEEE----TT CS
  Peptidase_C30   29 lsiarlhdfsvvsgnvqLtvvsaklkgvlLklkvetanaetPkykfvkvkpG 80  
                     +s+ r+++f++ s+  +L+v s+++  +lL+++ e+  ++  +y f +  +G
     KHJ31563.1 1094 ISSLRCKSFQIFSRLTSLSVSSKTYYQCLLEIQCEQYPPHIYQYLFNRYMSG 1145
                     57789******************************************99888 PP

>> MSV199  MSV199 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00012      0.42      24     118 ..     632     730 ..     607     733 .. 0.84
   2 ?   -4.1   0.1       4.8   1.7e+04      61      85 ..     818     842 ..     813     852 .. 0.72
   3 ?    1.5   0.0     0.093   3.3e+02      48      89 ..    1024    1065 ..     984    1071 .. 0.81
   4 ?    0.1   0.0      0.25     9e+02       4      50 ..    1182    1232 ..    1179    1251 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00012
      MSV199  24 plvdkkdvlitneiLeflgyeGeykkqkkk....fkklLkrnnieykelkykdeeielypslkeeikllkknaiaqkkWlilevkdfKkailrlntkns 118
                  l d+ ++ i +++L++lg     k  ++     + +l+  ++ +  +l+++  +++  + + +ei+llk+++  +++ lil  +++ k il    k+s
  KHJ31563.1 632 SLSDQYETAIVEKLLSWLGIRNPDKFVRRVvakvLGQLIWAKQCRTGQLHNESLIFQSIDRIVSEILLLKPRQADERHGLILTLNEIIKNILAHTSKES 730
                 5889999************98755555555000055556679999********************************************9998777765 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 4.8
      MSV199  61 nnieykelkykdeeielypslkeei 85 
                  ++ ++el++k  +++++ +++++ 
  KHJ31563.1 818 IDLIFRELENKRSITQTNHTIINDH 842
                 5566889998888888888888775 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.093
      MSV199   48 kkqkkkfkklLkrnnieykelkykdeeielypslkeeikllk 89  
                  ++++ ++ +l++ ++i+   +  ++  +++y ++++e++ + 
  KHJ31563.1 1024 TTYQGDVGSLVRIESIKTVAIICEHYLVQDYSNIQKEMTVIF 1065
                  4567777888888999999999999999*********99884 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.25
      MSV199    4 ftfikennyeld..lliswFwqplvdkkdv.lit.neiLeflgyeGeykkq 50  
                  ++fi++nny+ +   ++s   q++  k+++ +++  eiL fl   G++ +q
  KHJ31563.1 1182 QSFIDINNYNSKdsYIFSALLQVISLKSQRiYVSaLEILAFLISLGTFDRQ 1232
                  68*******988233333335544433333345415888888888888765 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       1.9   6.7e+03      19      30 ..     108     119 ..     107     119 .. 0.90
   2 ?    2.6   0.0     0.059   2.1e+02       4      28 ..     364     388 ..     361     391 .. 0.81
   3 ?    1.0   0.0      0.19   6.7e+02      15      29 ..     520     534 ..     519     536 .. 0.85
   4 ?    0.4   0.0       0.3   1.1e+03       2      27 ..     568     593 ..     567     595 .. 0.89
   5 ?    4.6   0.0     0.013        48      11      27 ..     653     669 ..     646     670 .. 0.89
   6 ?   -3.0   0.0       3.6   1.3e+04      16      30 ..    1034    1048 ..    1033    1049 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.9
                 HHHHHHHHHHHC CS
        HEAT  19 aAakaLgalaev 30 
                 aA++ L ++++v
  KHJ31563.1 108 AACRLLYRFCKV 119
                 8*********96 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.059
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                  +l+  sD +  +R aA kaL  + 
  KHJ31563.1 364 YMLEVVSDLATPIRLAASKALSVIT 388
                 567777888899*********9985 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.19
                 HHHHHHHHHHHHHHH CS
        HEAT  15 eVReaAakaLgalae 29 
                 +VR+aA+  +  la+
  KHJ31563.1 520 FVRDAACFGIWSLAR 534
                 6*******9988875 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.3
                 HHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgal 27 
                 l+ll+++  Dp+ ++R+ A  aL +l
  KHJ31563.1 568 LDLLISATLDPAGNIRRGASAALQEL 593
                 678999989**************988 PP

  == domain 5  score: 4.6 bits;  conditional E-value: 0.013
                 -SSHHHHHHHHHHHHHH CS
        HEAT  11 DpspeVReaAakaLgal 27 
                  p+ +VR+ +ak Lg+l
  KHJ31563.1 653 NPDKFVRRVVAKVLGQL 669
                 6899************9 PP

  == domain 6  score: -3.0 bits;  conditional E-value: 3.6
                  HHHHHHHHHHHHHHC CS
        HEAT   16 VReaAakaLgalaev 30  
                  VR  ++k+++ ++e+
  KHJ31563.1 1034 VRIESIKTVAIICEH 1048
                  899999*******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.85u 0.28s 00:00:01.12 Elapsed: 00:00:00.45
# Mc/sec: 8920.16
//
Query:       KHJ31564.1  [L=401]
Description: hypothetical protein EV44_g3446 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       830  (0.0462937); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2835.23
//
Query:       KHJ31565.1  [L=884]
Description: putative glycogen phosphorylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
          0 1046.9   0.0          0 1046.7   0.0    1.0  1  Phosphorylase  Carbohydrate phosphorylase


Domain annotation for each model (and alignments):
>> Phosphorylase  Carbohydrate phosphorylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ! 1046.7   0.0         0         0       2     711 .]     164     877 ..     163     877 .. 0.98

  Alignments for each domain:
  == domain 1  score: 1046.7 bits;  conditional E-value: 0
                    HCTT--HHHHHTTS--ECESSSHHHHHHHHHHHHHHHTT-EEEEEEE--SCESEEEEEETTEEEEEEEBTTCCG-TT-EE-GGG-EEEEESCEEEC CS
  Phosphorylase   2 kelgldleeleeqeedagLGnGGLGRLAacfldslatlelpavGygirYeyGlFkQkiedgaqveepdeWlkkgnpweiereekavevkfggkvee 97 
                    ++lg+++e++ +qe+da+LGnGGLGRLAacflds+atl++pa+Gyg+rY+yG+FkQ+i++g+qve+pd+Wl+  npwe++r++  v+++f+g+v++
     KHJ31565.1 164 NDLGFRIEDIIDQEHDAALGNGGLGRLAACFLDSMATLNYPAWGYGLRYRYGIFKQEIVNGYQVEVPDYWLD-FNPWEFPRHDIVVDIQFYGQVKK 258
                    789*********************************************************************.5*********************9 PP

                    CTTE....ESEEESCEEEEEEEEEEEEE-SSSS-EEEEEEEEEE-S.TTTTHHCCCTTSCCHHHHCHHHHHGGGTBSS-SSSSCCHCHHHHHHHHH CS
  Phosphorylase  98 eeeee.klkvkwvdeeevlavpydvpvvGyktktvntLrLwsakas.eefdleafnegdyikaveekneaeniskvLYPndsteegkeLrLkQqYf 191
                     +++e k+++ w+++e v+av++dvp++Gy+tk++n+LrLws+ka+  efd+++fn+gdy++av+++++ae+is+vLYPnd+ ++gkeLrLkQqYf
     KHJ31565.1 259 IQDTEgKQQTIWEGGEIVKAVAFDVPIPGYETKSTNNLRLWSSKAAsGEFDFQKFNSGDYESAVADQQRAETISAVLYPNDNLDRGKELRLKQQYF 354
                    99999999************************************99559*********************************************** PP

                    HHHHHHHHHHHHHHTCTTHGGGHHHHEEEEEESSTTTTHHHHHHHHHHHCC---HHHHHHHHCCCEEEEE--SSGGGS-EEEHHHHHHHSHHHHHH CS
  Phosphorylase 192 lvsaslqdilrrfkkkkkdleelpekvaiqlnDtHPalaipelmriLvdeeglewdeaweitkktfaytnhtvlpealekwpvellekllprhlei 287
                    +v+asl di+rrfkk+ + +++++++vaiqlnDtHP+lai+el riL+d+eglew++aw+i+++tf ytnhtvlpealekw++  +++llprhl+i
     KHJ31565.1 355 WVAASLYDIIRRFKKTGRAWSQFSDQVAIQLNDTHPTLAIVELQRILIDHEGLEWEKAWNIVSSTFGYTNHTVLPEALEKWSIPSFQNLLPRHLQI 450
                    ************************************************************************************************ PP

                    HHHHHHHHHHHHHHHSTT-HHHHHHHSSEE..TSCEEEHHHHHHHCCSEEEESSHHHHHHHHHTTTHHHHHHS.GGGEEE----B-CHHHCCCTSH CS
  Phosphorylase 288 ieeinerfleevekklpedeeklerlsiie..eekkvrmanlaivgshsvngvaalhsellkkevlkdfyely.pekfnnktnGitprrwlllanp 380
                    i +in  fl+ ve+++p+d+e l+r+siie  + k++rma+lai+gsh+vngva+lhs+l+k++++kdf++++ p+kf+n+tnGitprrwl++anp
     KHJ31565.1 451 IFDINLFFLQFVERRFPDDQELLSRVSIIEesQPKMIRMAHLAIIGSHKVNGVAELHSDLIKTTIFKDFVKIFgPDKFTNVTNGITPRRWLHQANP 546
                    ******************************77779*************************************99********************** PP

                    HHHHHHHHHCS.SGGCCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHH CS
  Phosphorylase 381 elaelitekig.eewvkdleeLkkLekladdkefleelaeikqenKerlaelikekegvevdpeslfdvqvkRlheYkRqlLnvLhiitlYneike 475
                    +l+eli++k+g  +++k+l+ L++Lek+addkef++e+aeik +nK+rla++ik+++g++v+p++lfd+qvkR+heYkRq++n++ +i++Y +ik+
     KHJ31565.1 547 RLSELIASKLGgFRFLKELNLLNDLEKYADDKEFKKEWAEIKFSNKARLAKYIKKTTGITVNPAALFDIQVKRIHEYKRQQMNIFGVIHRYLTIKS 642
                    **********989**********************************************************************************9 PP

                    S...TTS----EEEEEE----TT-HHHHHHHHHHHHHHHHHCC-TTTCCCEEEEEETT-SHHHHHHHGGG-SEEEE---TTTSSS-SHHHHHHHTT CS
  Phosphorylase 476 n...pekkvvprtvifggkaapgYalAkkiiklinsvaevvnndpevkdklkvvflenynvslaekiipaadlseqistagkeASGTgnmkfmlnG 568
                    +   ++k++vpr+ ifggkaapgY++Ak+ii lin+va+vvn+d++v+d lkvvfle+ynvs+ae i+pa+d+se+istag+eASGT+nmkf+lnG
     KHJ31565.1 643 MnpkERKALVPRVSIFGGKAAPGYWMAKTIIYLINCVATVVNKDKDVGDLLKVVFLEDYNVSKAELIVPASDISEHISTAGTEASGTSNMKFVLNG 738
                    96433366**************************************************************************************** PP

                    -EEEEESSTCHHHHHHHH-GGGSEEES-BHHHHHHHHHHT.--HHHHHHH-HHHHHHHHHHHCTTTTTTSTTTTHHHHHHHCTCC-TT-CHHHHHH CS
  Phosphorylase 569 altigtlDGanvEiaeevgeenifiFGltaeeveelkkkg.ynpkelyekdpelkevldalesgtfsekekeefkelvdsllekkDeylvlaDfes 663
                    +l+igt+DGan+Ei++e+g++nif+FG+ ae+ve+l+ ++ y        dp+l++v+d++++gtf   ++++f+ l++++ ++ D+ylv +Df+s
     KHJ31565.1 739 GLIIGTCDGANIEITREIGDNNIFLFGNLAEDVEDLRFTHnY---GSHVLDPDLRRVFDTIRKGTFG--DPDAFSALISAVEKHGDYYLVSDDFHS 829
                    *************************************99634...44556899*************5..678************************ PP

                    HHHHHHHHHHHHCSHHHHHHHHHHHHHCGGGGBHHHHHHHHHHHTTTS CS
  Phosphorylase 664 YveaqekveeaYkdkkewakksilniaksgkFssDrtikeYaeeiWkv 711
                    Y ++q  +e+ Yk++++w  k+i +++++g+FssDr+i+eYae+iW++
     KHJ31565.1 830 YNQTQVLIEDSYKNQDDWVIKTIQSVSRMGFFSSDRCINEYAESIWNI 877
                    **********************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (884 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       432  (0.024095); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 5987.26
//
Query:       KHJ31566.1  [L=588]
Description: putative msf multidrug transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.3e-34  117.4  54.6    1.5e-32  113.0  54.6    2.1  1  MFS_1          Major Facilitator Superfamily
     0.0054   16.8   2.6     0.0054   16.8   2.6    3.4  5  MpPF26         M penetrans paralogue family 26


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.0  54.6   1.6e-36   1.5e-32       1     352 [.      77     486 ..      77     487 .. 0.84

  Alignments for each domain:
  == domain 1  score: 113.0 bits;  conditional E-value: 1.6e-36
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslw.lllvlrvlqGlg 98 
                 l++++fls+   si+++al   ++  ++ +  ++++++  y l+++ +s++++rlsd +Gr+  +ll+ l+f++++l+  + s++   l+++r +qG+g
  KHJ31566.1  77 LVFGLFLSTVETSITATALV-KIGIYFN-DSYTANWVVLSYLLTYMGFSVIFARLSDAIGRKFAILLSWLIFGFFSLASGL-STSLtQLIIFRSFQGIG 172
                 5799****************.9******.89999*****************************************454447.55555************ PP

       MFS_1  99 agalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee......... 188
                 +++lf+++++++ +++p +  g+  g l+a+ ++++++gp++gg++++ +gWr++++ +a+ +++ ++  +ll + ++++++++s   ++         
  KHJ31566.1 173 GSGLFTMAMTVAPQVTPVKYWGLLSGSLGAALACSSLIGPIAGGVITQRFGWRWIYLYNAPCAAMIII-PFLLSWPKDRPHANQSRSLLLtqvdvpgal 270
                 ****************************************************************9988.4477788888888887777779******** PP

       MFS_1 189 .....................................................kgtgpaplvpawkallkdpvlw.illialllfffgfsglltllply 233
                                                                       +   +p+++ +k+ l +p     +++ +++ +f f+++++ lp+ 
  KHJ31566.1 271 lllsastllvfaldqggsyrlnwnsttiilclltsalcgimficwiifveagkCRINIKPIFS-LKSSLVRP--IgPAIALSFMSGFPFFIVMINLPIR 366
                 ************************999999999999999999999999996665555555555.55555555..1358888888889***********5 PP

       MFS_1 234 lqevlglsglllaglllallalvgailallagrls.drlgrrrrlllallllllaalglallavt....ssavllll..vlvliGfglgfvfpsllala 325
                 +q   g s   +ag+ l+ l +++a ++ ++g +s     + r+ +  +++++l++lg  ll+++      ++l +l  +++ +G+gl++ ++++++ +
  KHJ31566.1 367 FQILNGNS-PTMAGVHLMPLLALSATGSCIGGLFSvS---KNRTYYTLVFAFVLMCLGTGLLSTIpnsrVISHLQYLyqAILGLGIGLSLSSITVMTGL 461
                 46666666.4666655555555555666688888844...57777777777777777777777777557566666664444447778888899999999 PP

       MFS_1 326 sdlappeeagtasglfntagslggalg 352
                 ++++  e  ++++g++n a+ lgg++g
  KHJ31566.1 462 ASNY--ESIASVNGAVNQARVLGGSIG 486
                 9999..*******************98 PP

>> MpPF26  M penetrans paralogue family 26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   3.8     0.056     5e+02      20      74 ..      72     126 ..      67     133 .. 0.64
   2 ?   -3.2   0.3      0.93   8.3e+03      11      43 ..     141     156 ..     136     169 .. 0.50
   3 !   16.8   2.6     6e-07    0.0054      11     107 ..     294     388 ..     290     404 .. 0.86
   4 ?   -2.4   0.0      0.55     5e+03      26      47 ..     411     432 ..     398     461 .. 0.48
   5 ?   -3.6   0.0       1.2   1.1e+04     100     112 ..     545     557 ..     541     567 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.056
      MpPF26  20 llatvlllvsllayivllskskllskeyeeesslleaelligvllillidifyiv 74 
                 +++++l++  +l+ + ++++++ l k    ++  + a++++   l++ ++  +i+
  KHJ31566.1  72 IVLFILVFGLFLSTVETSITATALVKIGIYFNDSYTANWVVLSYLLTYMGFSVIF 126
                 3444444445555555555555555555566678889999999999888876665 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.93
      MpPF26  11 lsltiiilyllatvlllvsllayivllskskll 43 
                 ls++i  +++la                   l+
  KHJ31566.1 141 LSWLIFGFFSLASG-----------------LS 156
                 34444444444444.................33 PP

  == domain 3  score: 16.8 bits;  conditional E-value: 6e-07
      MpPF26  11 lsltiiilyllatv..lllvsllayivllskskllskeyeeesslleaelligvllillidifyivnfileiiLiiKvselkkkhpefkkvklhtvLli 107
                  s tii+++l+ ++  ++++++++++ +   + + +  ++++ssl+ +    +   i+l+    +  fi++i L i+ + l++++p +  v+l+  L++
  KHJ31566.1 294 NSTTIILCLLTSALcgIMFICWIIFVEAGKCRINIKPIFSLKSSLVRP----IGPAIALSFMSGFPFFIVMINLPIRFQILNGNSPTMAGVHLMPLLAL 388
                 5788888888888899********************************....4456788888899**********************999888777665 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 0.55
      MpPF26  26 llvsllayivllskskllskey 47 
                 +++++l+ + + + s++ ++ +
  KHJ31566.1 411 VFAFVLMCLGTGLLSTIPNSRV 432
                 3333333333333333333333 PP

  == domain 5  score: -3.6 bits;  conditional E-value: 1.2
      MpPF26 100 klhtvLliigifi 112
                 +++ +L+i g f+
  KHJ31566.1 545 RICLYLSIFGFFV 557
                 5677777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 3957.69
//
Query:       KHJ31567.1  [L=970]
Description: putative phosphatidylinositol 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.1e-33  114.7   0.3    5.8e-32  111.5   0.0    2.5  2  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
    3.2e-14   52.6   0.9    8.4e-14   51.3   0.9    1.8  1  Pik1            Yeast phosphatidylinositol-4-OH kinase Pik1
  ------ inclusion threshold ------
       0.11   11.8   0.0       0.21   10.9   0.0    1.3  1  DUF4135         Domain of unknown function (DUF4135)


Domain annotation for each model (and alignments):
>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.2      0.74   4.4e+03      52     116 ..     546     608 ..     540     629 .. 0.62
   2 !  111.5   0.0   9.6e-36   5.8e-32       3     240 ..     697     905 ..     696     915 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.74
                     SSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHHHHHHHHHCHCHCCHHHHHCC..HHHHHHTSSTTH CS
  PI3_PI4_kinase  52 rkcgiielvassetaaslldeklekkgvpptasveslrvaldkkklkkekklk..fekrtalkpksg 116
                     ++  +  l  +  ta + l++  ++ g +p+ +v +     + k ++ +++l+  +++++ ++ k +
      KHJ31567.1 546 EQTYFSALATHMRTASQMLNQLENTSGKRPKHEVAA----IRAKIIASMQSLEeqNFSEMRETQKLD 608
                     555566677788888888888887777777777777....445555555555544444444444444 PP

  == domain 2  score: 111.5 bits;  conditional E-value: 9.6e-36
                     EEEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHHHHHHHHHCHCHCC CS
  PI3_PI4_kinase   3 agiykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekkgvpptasveslrvaldkkkl 97 
                     ++i+k g dlrq+   +q+++++  +++  + p +    +++++++ +g+++g+ie + +  +++s+ +           a +es + ++++   
      KHJ31567.1 697 SVIVKTGADLRQEAFACQLIQVCHDIWKDAKVPVW----VERMRILVTGESSGLIETITNGISLHSIKRSLT-------LAAIES-GQNPRRRI- 778
                     6899*******************************....****************************99976.......467777.33333333. PP

                     HHHHHCCHHHHHHTSSTTHHHHHHHHHSSSH..HHHHHHHHHHHHHHHHHHHHHHHHT-TT--TTTEEEETTTSEEEESSTTTCCTCSHCSSSS- CS
  PI3_PI4_kinase  98 kkekklkfekrtalkpksgllqeFvkkspsa..eewlearkqFvrslaklsvldyilgngDRhldNilvdktsgklihIDfGlilpdewkllpfp 190
                                       +l+++F k +  +  e++l+a + F rsla +s+++y+l++ DRh++N l+ + +g++ihIDfG++l +++   +f+
      KHJ31567.1 779 -----------------ASLKDHFLKAFGLPesEAYLAAVDAFKRSLAAYSIISYVLQLKDRHNGNVLI-DNEGHIIHIDFGFMLSNSPGSVGFE 855
                     .................57999999999655448***********************************.9**********************95 PP

                     .SSSSSS-THHHHHHT..STTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH CS
  PI3_PI4_kinase 191 qekvPfrltrelvlai..dpskdeglfresceealealrrdqnlltrllkka 240
                         Pf+lt+++v+++    s+++  ++++c +a++alr+ ++ l+ l +++
      KHJ31567.1 856 --AAPFKLTQDYVDVLggVASAHFDEYKQLCKQAFQALRHSADNLIDLVNIM 905
                     ..99************8878999**********************9999984 PP

>> Pik1  Yeast phosphatidylinositol-4-OH kinase Pik1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   0.9   1.4e-17   8.4e-14       1      50 [.     106     155 ..     106     156 .. 0.97

  Alignments for each domain:
  == domain 1  score: 51.3 bits;  conditional E-value: 1.4e-17
                 --TTHHHHHHHHHHT--SS-SS.----TT--SS-SHHHHHHHHHHHHHT- CS
        Pik1   1 SygFqvcrrvlNklQfilFnlsaseqkkkkkfrENvsPalvLssavlssi 50 
                 S +F+++ rvlNk+ +i+F++s +++++++ ++ENv+P++vL+s+vl+s+
  KHJ31567.1 106 SKAFKTSSRVLNKVHKIIFGVSEQAHNENENINENVLPVTVLASFVLASV 155
                 89***********************************************8 PP

>> DUF4135  Domain of unknown function (DUF4135)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   3.5e-05      0.21     131     178 ..     800     848 ..     787     884 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 3.5e-05
     DUF4135 131 everfYrraGallallyllggtDlheeNl.iasgeqpvliDlEtllthe 178
                 +v++f r + a+  ++y+l+ +D h++N+ i   ++++ iD+  +l+++
  KHJ31567.1 800 AVDAFKRSLAAYSIISYVLQLKDRHNGNVlIDNEGHIIHIDFGFMLSNS 848
                 66777788899999***************8888889******9999773 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (970 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       888  (0.0495287); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.27s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 6525.50
//
Query:       KHJ31568.1  [L=497]
Description: hypothetical protein EV44_g5497 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00014   21.8   7.7    0.00027   20.9   7.7    1.5  1  zf-CCHC     Zinc knuckle
    0.00015   21.4   1.5    0.00015   21.4   1.5    1.7  2  zf-CCHC_5   GAG-polyprotein viral zinc-finger
     0.0074   16.2   3.2      0.015   15.3   3.2    1.4  1  zf-CCHC_3   Zinc knuckle
  ------ inclusion threshold ------
      0.054   13.3   5.2      0.087   12.7   5.2    1.3  1  zf-CCHC_2   Zinc knuckle
      0.086   13.0   5.0       0.43   10.8   4.7    2.4  1  Fib_alpha   Fibrinogen alpha/beta chain family
       0.13   12.3   2.3       0.12   12.4   0.7    1.8  2  DUF1664     Protein of unknown function (DUF1664)
       0.13   12.1   0.0        1.4    8.8   0.0    2.3  2  R2K_2       ATP-grasp domain, R2K clade family 2
       0.91    9.8   7.2        2.6    8.3   4.9    2.9  1  XhlA        Haemolysin XhlA


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   7.7   1.2e-07   0.00027       2      16 ..     373     387 ..     372     388 .. 0.95

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 1.2e-07
                 CTSSSSSSSSTTTTS CS
     zf-CCHC   2 kCynCGepGHiardC 16 
                  Cy+CG+ GH+a++C
  KHJ31568.1 373 NCYRCGQKGHWANNC 387
                 7************** PP

>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.2         4   9.1e+03      16      20 ..     355     359 ..     354     360 .. 0.79
   2 !   21.4   1.5   6.8e-08   0.00015       2      20 ..     371     389 ..     370     393 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 4
                 TT--- CS
   zf-CCHC_5  16 rdChs 20 
                  +Chs
  KHJ31568.1 355 EECHS 359
                 79**9 PP

  == domain 2  score: 21.4 bits;  conditional E-value: 6.8e-08
                 --B-TTT-SSBS-TTT--- CS
   zf-CCHC_5   2 pglCpRCkkgkHwardChs 20 
                 ++ C RC++  Hwa++Ch+
  KHJ31568.1 371 SNNCYRCGQKGHWANNCHA 389
                 688***************8 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   3.2   6.6e-06     0.015       4      23 ..     371     391 ..     369     404 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 6.6e-06
   zf-CCHC_3   4 saaCQkClkkGHwtYECkn.a 23 
                 s  C +C++kGHw+  C + +
  KHJ31568.1 371 SNNCYRCGQKGHWANNCHAtQ 391
                 678**************9742 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   5.2   3.9e-05     0.087       6      20 ..     374     388 ..     373     389 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.9e-05
   zf-CCHC_2   6 ChiCgkkGHyIqdCP 20 
                 C +Cg+kGH+ ++C+
  KHJ31568.1 374 CYRCGQKGHWANNCH 388
                 99************7 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   4.7   0.00019      0.43      32      86 ..      43      97 ..      32     123 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00019
                CCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha 32 dvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikksskel 86
                +++ ++ek+e++l++++ +++++e++v +i++sl+++ k ++d ++  +ks ++ 
  KHJ31568.1 43 NTSGRIEKIEKRLDKMETRNTNIEKIVIQIQKSLNSQFKIEEDPKEPKEKSVQKA 97
                67889********************************999887544444444443 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.7   5.3e-05      0.12      33      97 ..      13      77 ..       7      99 .. 0.91
   2 ?   -3.5   0.0       4.5     1e+04      78      99 ..     306     327 ..     298     347 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.3e-05
     DUF1664 33 fvTkrslsdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredls 97
                f  ++ l+d + ++ ++ +++ +s++    + s ri++++k+ld+++   ++i++ v ++++ l+
  KHJ31568.1 13 FSLNKKLNDSLVEIDTRFKNLEKSIELGHINTSGRIEKIEKRLDKMETRNTNIEKIVIQIQKSLN 77
                6668999*****************************************************99886 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 4.5
     DUF1664  78 qkeiskeikeevtevredlsei 99 
                  +e++ +i+++v + + +++++
  KHJ31568.1 306 IIEMAVQIASQVVKWSTEVDTF 327
                 4566667777777766666655 PP

>> R2K_2  ATP-grasp domain, R2K clade family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0   0.00062       1.4      48      78 ..     141     171 ..     123     173 .. 0.84
   2 ?    0.2   0.0      0.27   6.1e+02      47      78 ..     304     335 ..     289     338 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00062
       R2K_2  48 sldedlpvlvsevvsfasEyRlfvldgeiit 78 
                 ++++d    v+++v ++ E+Rl+v +gei++
  KHJ31568.1 141 DIQDDAFASVKNKVVLKPEWRLVVANGEIFD 171
                 566777778999****************986 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.27
       R2K_2  47 gsldedlpvlvsevvsfasEyRlfvldgeiit 78 
                 +++ e    + s+vv++ +E   f l+++ +t
  KHJ31568.1 304 YEIIEMAVQIASQVVKWSTEVDTFALNKQTAT 335
                 555555667889*********99999998765 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   4.9    0.0012       2.6       4      49 ..      21      63 ..      18      78 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0012
        XhlA  4 erlerietkldnleervdkleekaaeaeekiknleedlkklesnqk 49
                + l++i+t+ +nle+    +e+   ++  +i+ +e++l+k+e  ++
  KHJ31568.1 21 DSLVEIDTRFKNLEKS---IELGHINTSGRIEKIEKRLDKMETRNT 63
                7899999999999995...888888888888888888888887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (497 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1677  (0.0935356); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.46
# Mc/sec: 3261.69
//
Query:       KHJ31569.1  [L=1098]
Description: hypothetical protein EV44_g6247 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.14   12.3   0.4       0.31   11.2   0.4    1.5  1  DUF2509   Protein of unknown function (DUF2509)


Domain annotation for each model (and alignments):
>> DUF2509  Protein of unknown function (DUF2509)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.4   1.7e-05      0.31      48     126 ..     425     498 ..     419     503 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 1.7e-05
     DUF2509  48 sWslksseewqCrqlaeeklkaClrrlsedellllkgeaalaeeeklvlYqlvklkekededklvalesGWlDFcPeke 126
                 +W +k   +++C++ ++++ k C+ ++  + +++   e+ +++ + l+   + + ++k +++++  l+s Wl FcP + 
  KHJ31569.1 425 TWIFK---QFNCEEISNQQFK-CIGKVWTSVQQVTTTEGLSEKINDLQDLGSLSRRKK-SSTSILSLKSRWLAFCPPTP 498
                 45555...89****9999976.999986666666666665555588887777777777.445999**********9754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1098 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.29s 00:00:01.03 Elapsed: 00:00:00.49
# Mc/sec: 6777.24
//
Query:       KHJ31570.1  [L=240]
Description: putative secreted effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        3.6    7.0  12.1        8.3    5.8  12.1    1.6  1  PBP_sp32  Proacrosin binding protein sp32


Domain annotation for each model (and alignments):
>> PBP_sp32  Proacrosin binding protein sp32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8  12.1   0.00046       8.3     187     239 ..     190     239 ..     168     240 .] 0.72

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.00046
    PBP_sp32 187 ggkekapeakpkeeqllekkqeqleehkteekkkqeeqeeeekeeeakqeege 239
                  g+e +      e+++  k+ ++   hk ee+++ ee eeee+eeea  ee e
  KHJ31570.1 190 SGQEDE---SDDEKDVGTKRGKKNGIHKEEEREETEEVEEEEEEEEAGEEEDE 239
                 233333...44677777888999999****************99999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1458  (0.0813208); expected 358.6 (0.02)
Passed bias filter:                      706  (0.0393775); expected 358.6 (0.02)
Passed Vit filter:                       105  (0.00585643); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 1725.35
//
Query:       KHJ31571.1  [L=868]
Description: putative histone deacetylase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      5e-52  177.3   0.0    9.1e-52  176.4   0.0    1.4  1  Hist_deacetyl    Histone deacetylase domain
  ------ inclusion threshold ------
       0.17   11.0   0.9       0.75    8.9   0.1    2.1  2  Trehalose_PPase  Trehalose-phosphatase


Domain annotation for each model (and alignments):
>> Hist_deacetyl  Histone deacetylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.4   0.0     1e-55   9.1e-52      28     306 ..     311     653 ..     254     654 .. 0.82

  Alignments for each domain:
  == domain 1  score: 176.4 bits;  conditional E-value: 1e-55
                    .EE-----HHHHTTTS-HHHHHHHHCHHHHCHHT.TTHCCHHHCCTS..........TSSSSSTHCTTTCCHHHHHHHHHHHHHHHHHHTTSS... CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx... RF
  Hist_deacetyl  28 liqpseatkeellkvHskeYlelleslsnelkkkeeakekeleeias..........klldddtpvspktlkaallavgavleavdavlsgsv... 110
                    + ++ ++t++ +++vH k+++ +l+ ++++ ++   +  kel + +           kl ++d ++++++l+a++ a gav+e+vd v +g+    
     KHJ31571.1 311 TTRNLALTSNTVTNVHGKKWMSELKIMCDDAESRLAIYGKELVRPEMdrgpdneipaKLHEGDLYLCSESLNAIEGALGAVCEGVDTVFQGTTnkn 406
                    55566788999****************999988887766665444445677766654499*****************************9977433 PP

                    ..SEEEETTSS--TT-BTTB-BTTBSS-HHHHHHHHHHHCC-SS-EEEEE-SSS--HHHHHHCTT................-TTEEEEEEEE-CCT CS
                    ..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxxxxxxxxxxxxx RF
  Hist_deacetyl 111 ..kaafvlvrPpgHHakaseasGFClvNnvaiaikylqakhelkrvailDvDvHhGnGteeafys................dpdvltlSiHryegi 188
                       +afv+vrPpgHH+ as +sGFC vNn++i+i ++   ++l++ ai+D+D+HhG+G ++++++                + ++ ++S+H+   +
     KHJ31571.1 407 gpCRAFVAVRPPGHHCSASYPSGFCWVNNIHIGISHASLTYGLTHAAIIDFDLHHGDGSQAIAWEinrratsaaknalpwkKTSIGYFSLHD--IN 500
                    44456***********************************************************777777777777777779**********..78 PP

                    STT.SS--TT---......SGGGTTSEEEEEE-TT-BHHHHHHHH..................HHCHHHHHCCH--.SEEEEEE-STTBTTS.... CS
                    xxx.xxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxx..................xxxxxxxxxxxxx.xxxxxxxxxxxxxxx.... RF
  Hist_deacetyl 189 fyP.gtgaledlg......egkgkgfnlnvpleegtgdeeylkvf..................eeilrpvleefkP.dlilvsaGfDalkgd.... 254
                     yP + g+ e++       eg+  ++++nv+l++  +++e++k++                  +e +r   +  kP  +i +saGfDa++ +    
     KHJ31571.1 501 SYPcEMGEDEKVKnaslciEGSHGQSIWNVHLQTWKTEAEFWKLYetkysvllektknylraqTERVRTNGSVIKPiGAIFLSAGFDASEWEslgm 596
                    8**6566666665666666555555********************88888888888877777766777777779**789***********998988 PP

                    TT-S-BB-HHHHHHHHHHHCCCHGS...-.G..EEEEE-S---HHHHHHHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxx...x.x.xxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl 255 plgelnlsvegykeltkklaeladk...v.k.kvvllleGGYnlealaravtavlsa 306
                    + +++n+ +e y+++t+++++la++     + +v+++leGGY+++al ++v ++ls 
     KHJ31571.1 597 QRHKVNVPTEFYARFTRDVVRLANEadtAvEgRVISVLEGGYSDRALCSGVLSHLSG 653
                    99999*************9999875332455799**************999999875 PP

>> Trehalose_PPase  Trehalose-phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.1   8.3e-05      0.75      50     110 ..     508     566 ..     499     573 .. 0.88
   2 ?   -0.1   0.1     0.045   4.1e+02      71     110 ..     667     706 ..     663     710 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 8.3e-05
                      HHHHH---SSEEEEGGGTEEE-TT--EEE-HHHHTTHHHHHHHHHHHHHHHTTSTT-EEEE CS
  Trehalose_PPase  50 eellvkvpelglaaeHGaeirspsgedwenqaevedlewlkevkeileektertpGsyiEe 110
                      e++ vk   l + ++HG  i   + ++w++  e+e+ +  ++   +l ekt+++ +++ E+
       KHJ31571.1 508 EDEKVKNASLCIEGSHGQSIWNVHLQTWKT--EAEFWKLYETKYSVLLEKTKNYLRAQTER 566
                      788899999*********************..********************999998886 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.045
                      -TT--EEE-HHHHTTHHHHHHHHHHHHHHHTTSTT-EEEE CS
  Trehalose_PPase  71 spsgedwenqaevedlewlkevkeileektertpGsyiEe 110
                       ps+ +++n++ +ed++ +k+v +  ++  +++  +++Ee
       KHJ31571.1 667 NPSNFSHSNSQQNEDFSTRKSVDQSIDYNPKWWSQASLEE 706
                      5778899999*******************99999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (868 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       571  (0.0318478); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 5897.71
//
Query:       KHJ31572.1  [L=418]
Description: putative queuine trna-ribosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.8e-140  468.1   0.0   2.1e-140  467.9   0.0    1.0  1  TGT       Queuine tRNA-ribosyltransferase
  ------ inclusion threshold ------
      0.079   12.5   0.0       0.22   11.1   0.0    1.7  1  Sgf11_N   SAGA-associated factor 11 N-terminal domain


Domain annotation for each model (and alignments):
>> TGT  Queuine tRNA-ribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  467.9   0.0  2.3e-144  2.1e-140       2     348 ..      17     391 ..      13     393 .. 0.97

  Alignments for each domain:
  == domain 1  score: 467.9 bits;  conditional E-value: 2.3e-144
                 TEEEEEEEETTEEEEESEEEEBETTSSBTTB-HHHHH.HTTES-EEEEHHHHHHTTTHHHHHHTTHHHHHHT--S-EEEE-SHHHHHHH.E..EEESSE CS
         TGT   2 gaRlGklelphgtietPafmpvgtqgtvkgltpdelkeelgaqiilsntyhlelrpgeelvakagglhkflgwdkpiltdsggfqvfsl.k..kiteeg 97 
                 +aR+++l+lphg ++ P+fmpv+tq+++kgltp++l e+ g++++l+ntyhl l+pg+++++k+gg+hkf gw++++ltdsggfq++sl k  +iteeg
  KHJ31572.1  17 KARASNLTLPHGLVKLPIFMPVATQASLKGLTPQQL-EQSGCRLCLNNTYHLALKPGQDVIDKVGGAHKFQGWKHNLLTDSGGFQMVSLlKlaNITEEG 114
                 69**********************************.588************************************************99556****** PP

                 EEEE-TTTS-EEEE-HHHHHHHHHHHT-SEEE-----.--SS--HHHHHHHHHHHHHHHHHHHHHH.....SEEEEEE--TT-HHHHHHHHHHHHHH-- CS
         TGT  98 vsfqsridGskvlltpeesieiqeklgsDiimalddv.vpspaskkrveksverTlrwldrcleah.....qalfgivqGglyedlreesaeelakrdf 190
                 v+f s++d s +lltpe+si++q+++gsDiim+lddv v++++++ r++ ++ r++rwldrc++ah     q+lf+i+qGgl+ dlr+e++ee++kr++
  KHJ31572.1 115 VRFLSPHDNSPMLLTPEHSIDLQNSIGSDIIMQLDDVlVTTSQDEARMRVAMYRSIRWLDRCIAAHknpstQNLFCIIQGGLNLDLRRECCEEMMKRNT 213
                 ***********************************9868888999*************************999************************** PP

                 SEEEE-SSSSSSHHHHHHHHHHHHGGGS-TTS-EEETTB-SHHHHHHHHHTT--EEEESHHHHHHHTTEEEETTEEEETTSGGGTT--SBSSSS--SHH CS
         TGT 191 dgyaigGlsvgeekeellevveavtellpedkprylmGvgtPedlleavalGvDmfdcvyptrtarngraltsegelnlknakyaedfspldegCsCyt 289
                 +g+aigGls+ge+k ++++vv+a+t+ lp++kpry+mGvg+Pedl+++valG+Dmfdcv+ptrtar+g+a+t++g lnl++aky++d++pl+ gC+C +
  KHJ31572.1 214 PGIAIGGLSGGEAKPDYCRVVDACTSILPTNKPRYVMGVGYPEDLVVSVALGADMFDCVWPTRTARFGNAITRTGILNLRHAKYETDLNPLEVGCKCIC 312
                 *************************************************************************************************** PP

                 HH.....................H-BHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHH CS
         TGT 290 Ck.....................nytraylhhllktkemlgaiLltiHNlhyylelfkriReaIkegtfeefveefarky 348
                 C+                       tr+ +hh++ +ke++ a+Llt+HN++y+l+l+++iR+aI e++f++f+++f+++ 
  KHJ31572.1 313 CRpkemandqnmdrtnvlsggglGVTRSFIHHIV-AKETVSAHLLTLHNVWYMLTLMASIRKAIIEDCFPQFIKTFFADL 391
                 *99999999999988888888877*********8.9999*************************************9876 PP

>> Sgf11_N  SAGA-associated factor 11 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   2.5e-05      0.22      17      34 ..     340     357 ..     338     359 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.5e-05
                 HHHHHHHHHHHHHHHHHH CS
     Sgf11_N  17 smIQDIVsretvkqklLk 34 
                 s I+ IV++etv ++lL 
  KHJ31572.1 340 SFIHHIVAKETVSAHLLT 357
                 78**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (418 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       473  (0.0263818); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2955.75
//
Query:       KHJ31573.1  [L=248]
Description: putative ctd kinase subunit gamma protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-45  151.9   0.1    1.2e-44  151.2   0.1    1.2  1  CTK3      CTD kinase subunit gamma CTK3
    4.2e-20   71.7   6.5    8.8e-20   70.6   6.5    1.6  1  CTK3_C    CTD kinase subunit gamma CTK3 C-terminus


Domain annotation for each model (and alignments):
>> CTK3  CTD kinase subunit gamma CTK3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.2   0.1   1.4e-48   1.2e-44       1     120 [.       1     121 [.       1     124 [. 0.96

  Alignments for each domain:
  == domain 1  score: 151.2 bits;  conditional E-value: 1.4e-48
                 --HHHHHHHHHHHHTT--SSGGGTHHHHHHHHHTGGGHHHHHHHHHHHHHHS..-HHHHHHHHHHHHHHHHHHHHTT--S..THHHHHHHTHHHHHHHH CS
        CTK3   1 mDpFEvrsqFsqlLrkLtasvqslqkaaqfAlknkdkeedlfscileqlesa..dlNtranilyfidllleeslkegqsekspYveslkrdilklvdsv 97 
                 mDpFEvr++F+ l+ +L+asv s +kaaq+Alk+++++edl+sci+eqle +  ++N++ani+yf+++l++++ ke++    +Yv++++rd++++vd+v
  KHJ31573.1   1 MDPFEVRIRFTGLIVNLNASVISATKAAQYALKHREMDEDLHSCIIEQLEMPrnTMNNKANIMYFVEHLCDMAAKEKHV---DYVRMIQRDMVRIVDAV 96 
                 9*************************************************8888*********************9998...8**************** PP

                 S-..HHHHHHHHHHHHHHHHHHHTT CS
        CTK3  98 vP..gsgaaNlksvrkilkslklks 120
                 +P  g gaaN+k+vrk+l++l  k 
  KHJ31573.1  97 APedGTGAANIKVVRKVLQALGMKG 121
                 **9999**************98776 PP

>> CTK3_C  CTD kinase subunit gamma CTK3 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.6   6.5   9.8e-24   8.8e-20       1      65 [.     170     230 ..     170     234 .. 0.93

  Alignments for each domain:
  == domain 1  score: 70.6 bits;  conditional E-value: 9.8e-24
      CTK3_C   1 skkqilkRiEeDRErhKRlrEniWvvprskekslateaEfenlWeetsdlneddeeealeeleel 65 
                 ++k +++RiEeDRErhKRlrE+iW++p+s +    +e+E e lWe+tsd++edd+  + ee+ee+
  KHJ31573.1 170 DRKVVEQRIEEDRERHKRLRESIWAIPTSLD----QENEAEILWENTSDIGEDDYVLYSEEAEER 230
                 57899************************74....59*************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1103  (0.0615204); expected 358.6 (0.02)
Passed bias filter:                      602  (0.0335769); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 1972.61
//
Query:       KHJ31574.1  [L=188]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.89    9.2  12.1      0.048   13.2   3.0    2.5  2  RecR      RecR protein


Domain annotation for each model (and alignments):
>> RecR  RecR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   3.0   2.7e-06     0.048       9      36 ..      88     121 ..      85     123 .. 0.75
   2 ?    0.8   1.7     0.021   3.7e+02      17      31 ..     133     149 ..     123     151 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.7e-06
                 HHHHHHH-EE-TTT--EESSS......S-CCCCS CS
        RecR   9 LqeakekvrhCsrCgnlteed......lCaICsd 36 
                 L+++++++++C+rC+ +  +        C+ Cs+
  KHJ31574.1  88 LNKLRKSIQQCKRCHGFHVTRgcsrapACENCSS 121
                 899**************55554444435888887 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.021
                 EE-TTT--E..ESSSS- CS
        RecR  17 rhCsrCgnl..teedlC 31 
                 + C++Cg    +++  C
  KHJ31574.1 133 TKCRNCGGSqrSDNRNC 149
                 57999998744555556 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       824  (0.0459591); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 1554.10
//
Query:       KHJ31575.1  [L=86]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       643  (0.0358637); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 651.28
//
Query:       KHJ31576.1  [L=312]
Description: hypothetical protein EV44_g6102 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      0.004   17.1   0.2      0.008   16.1   0.2    1.5  1  DUF4920   Domain of unknown function (DUF4920)
  ------ inclusion threshold ------
       0.13   12.3   1.1       0.29   11.2   1.1    1.6  1  Squash    Squash family serine protease inhibitor


Domain annotation for each model (and alignments):
>> DUF4920  Domain of unknown function (DUF4920)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.2   8.9e-07     0.008       6      46 ..     136     177 ..     131     182 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 8.9e-07
     DUF4920   6 kekdtlkvkvkgkveevcqkkGcWlkldledge.evrVkfKd 46 
                 ++k++ k+k++ k   vc+k GcW + + ++++ + +V fK 
  KHJ31576.1 136 NNKEQPKTKFSKKACFVCSKEGCWSTRHSPEERmKSMVDFKS 177
                 6778889*****************998887776599****96 PP

>> Squash  Squash family serine protease inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.1   3.3e-05      0.29       5      21 ..      58      74 ..      57      79 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.3e-05
                ----B-SSGGGSSTT-E CS
      Squash  5 rIlmeCkrDsDCladCv 21
                + l  C +DsDC   C+
  KHJ31576.1 58 KLLAACEEDSDCSMACM 74
                56889********9995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1074  (0.059903); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 2449.57
//
Query:       KHJ31577.1  [L=229]
Description: putative kinetochore protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-15   56.1   5.4    4.6e-15   56.1   5.4    2.5  2  Mis14     Kinetochore protein Mis14 like
  ------ inclusion threshold ------
        0.3   10.9   0.2        0.3   10.9   0.2    1.9  2  DUF3772   Protein of unknown function (DUF3772)


Domain annotation for each model (and alignments):
>> Mis14  Kinetochore protein Mis14 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1     0.089     8e+02      66      78 ..      43      55 ..       9      64 .. 0.51
   2 !   56.1   5.4   5.1e-19   4.6e-15       3     130 ..      63     202 ..      61     204 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.089
                HHHHHHHHHCCCH CS
       Mis14 66 kiaeayakelkae 78
                 i++++++e++++
  KHJ31577.1 43 AIRKHVEREVSQY 55
                2333333333333 PP

  == domain 2  score: 56.1 bits;  conditional E-value: 5.1e-19
                 HHCTEECTTBXSTT.SHHHHHHHHHHTT.............XXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCT--HH CS
       Mis14   3 asesvvinGldsssksikdllsesqkeev............EpfdlelnekvrslyqelEdltvevAqlRreaPrkiaeayakelkaeleeldeyleai 89 
                 +s++++inGl  s++++  +l  + + ++            Epf++ l ++ ++l qe Edl+ e+A lRr++P+ki + +  e+k+ le ++++l + 
  KHJ31577.1  63 ISKNISINGLEPSESKVDAILDLKLDAMTtatttaseieeyEPFNTHLFQQAQKLAQEEEDLIEEIAMLRRTMPAKIVKSVKTEFKEGLEADEATLTTA 161
                 689********555555555554444444444666777777*****************************************************66555 PP

                 HHH--..------SSSHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Mis14  90 nelekqekkdpeeddededekerleelvkqyeeslkslkel 130
                  ++  +   d  ++  +++  e +e+++k++++s++ l +l
  KHJ31577.1 162 LKEYVECSVDVTPTILNITALESQETMEKDWNKSVQVLGSL 202
                 554447889999999********************999876 PP

>> DUF3772  Protein of unknown function (DUF3772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.2      0.37   3.3e+03      10      25 ..      12      27 ..      10      29 .. 0.77
   2 ?   10.9   0.2   3.3e-05       0.3       2      24 ..     112     134 ..     111     137 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.37
     DUF3772 10 rAdqLsdqIsklRRer 25
                + d+L+  +s++RR++
  KHJ31577.1 12 SSDDLQFLVSNIRRAA 27
                6777777889999985 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 3.3e-05
     DUF3772   2 kqArllkvrAdqLsdqIsklRRe 24 
                 +qA+ l+++ ++L+++I+ lRR+
  KHJ31577.1 112 QQAQKLAQEEEDLIEEIAMLRRT 134
                 69********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1248  (0.0696079); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 1887.65
//
Query:       KHJ31578.1  [L=922]
Description: putative domain v [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.9e-82  274.3   0.5    1.1e-81  273.3   0.5    1.5  1  MutS_V         MutS domain V
    4.4e-36  124.9   0.4    4.4e-36  124.9   0.4    2.3  3  MutS_III       MutS domain III
    2.6e-21   76.4   0.2    7.4e-21   74.9   0.2    1.9  1  MutS_II        MutS domain II
    2.5e-17   63.0   2.9      8e-17   61.4   2.9    2.0  1  MutS_IV        MutS family domain IV
    8.1e-16   58.3   0.0    2.4e-14   53.5   0.0    2.5  2  MutS_I         MutS domain I
  ------ inclusion threshold ------
      0.049   14.2   0.5      0.049   14.2   0.5    2.3  2  ArdA           Antirestriction protein (ArdA)
      0.081   12.5   0.0       0.22   11.1   0.0    1.6  1  AAA_27         AAA domain
        0.1   12.6   0.1       0.54   10.2   0.1    2.2  2  Peptidase_M16  Insulinase (Peptidase family M16)
       0.13   11.9   0.0       0.26   10.9   0.0    1.4  1  SUR7           SUR7/PalI family


Domain annotation for each model (and alignments):
>> MutS_V  MutS domain V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  273.3   0.5   5.7e-85   1.1e-81       1     188 []     652     847 ..     652     847 .. 0.98

  Alignments for each domain:
  == domain 1  score: 273.3 bits;  conditional E-value: 5.7e-85
                 EEEE-STTSSHHHHHHHHHHHHHHHHHT--BSSSEEEEE--SEEEEEE--------SS-HHHHHHHHHHHHHTT--TTSEEEEESTS-SS-HHHHHHHH CS
      MutS_V   1 llitGpnmaGkstylrqvalivllaqiGsfvpaekaeisivdkiftRvgasDdlakgkstFmvEmlEtasilknatekslvilDElGRGtstydGlaia 99 
                 l+itGpnm+Gksty+rq+++i+l+aqiG+ vp++ ae++i+d+i++RvgasD++ kg stFm+EmlEta+ilk+at++sl+i+DElGRGtstydG+++a
  KHJ31578.1 652 LIITGPNMGGKSTYIRQIGVIALMAQIGCSVPCTDAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLA 750
                 59************************************************************************************************* PP

                 HHHHHHHHHTT--EEEEEES-GGGGGHHHHSTTEEEEEEEEE........EETTEEEEEEEEEES--SS--HHHHHHHTT--HHHHHHHHHHHHHTT CS
      MutS_V 100 lavaeyllekikaktlfatHyheltklaekleevknlhlavk........eeeedivflykvkegaaeksyGikvaklaglPesvverArevlkele 188
                 +a+ ey++++i ++++fatH+helt+l+e++++v+nlh+ ++        ++++++++lykv++g++++s+Gi+va+++ +Pe+v+++A+++++ele
  KHJ31578.1 751 WAISEYIIKEISCFAMFATHFHELTALSENFAQVENLHVVAHiddtnkrdQNKREVTLLYKVESGVCDHSFGIHVAEIVRFPEKVIRMAKQKADELE 847
                 *****************************************999*999977889***************************************9996 PP

>> MutS_III  MutS domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       2.6   5.2e+03     127     164 ..     199     236 ..     119     254 .. 0.64
   2 !  124.9   0.4   2.2e-39   4.4e-36       2     191 .]     293     596 ..     292     596 .. 0.86
   3 ?   -2.5   0.0       2.5   4.9e+03     129     139 ..     715     725 ..     662     817 .. 0.61

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2.6
                 HH.HHHHHHB-SS--SSGGGS--B-THHHHHHHHHHHHH CS
                 xx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III 127 la.elleeaideeplalekegedlraiealeqelfqell 164
                 ++ + ++  id+ +++l++++      +++eq+ +++ll
  KHJ31578.1 199 VElKKIKAVIDKCGISLSERPSSDFSTKDIEQD-LSRLL 236
                 334444444444444444444444444444444.33333 PP

  == domain 2  score: 124.9 bits;  conditional E-value: 2.2e-39
                 HHHHTTSSS-TTS.SSSS-HHHHH---SSHHHHHHHHHHHH--BS-HHHHHHHHHHHHH.T..TT.HHHHHHH.HTT---HHHHHHHHHTT---HHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III   2 TlrnLeilenlrggskegsLlgvldrTvTamGaRlLrewllqPltdleeInaRldaVee.leneelreelrel.lrrlpDleRllsrislgkakardlk 98 
                 ++++L++    r+gsk++sL+g+l++++T+ G+RlL +wl+qPl+++eeI++R+++Ve  +e++elr++++e+ l+++pDl Rl ++++ ++a  +d+ 
  KHJ31578.1 293 AIKALNLMPGPRDGSKTMSLYGLLNHCKTPAGSRLLAQWLKQPLMSKEEIENRQQLVEAfVEDSELRQTIQEEhLKSIPDLYRLARKFQRKQAGLEDVV 391
                 899****77667778899****************************************99***********887**************99988888976 PP

                 HHHHHHHHHHTTTTT---SSTHHHHH.................HHHHHHHHHHB-SS--SSGGGS--B-T............................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.................xxxxxxxxxxxxxxxxxxxxxxxxxxx............................. RF
    MutS_III  99 allealkaleelvallekeklaesee.................eslaelleeaideeplalekegedlra............................. 151
                 +  + ++al+  +++ e+ + ++ ++                 e+l+e++e ++d ++ ++++ + + +                              
  KHJ31578.1 392 RAWQVVSALPGFIKTFEDVMDEKYKDhldtayttklkeylgslEKLQEMVEMTVDLDAAQNHDYVIKPEFdeklqlirkrleksrfemerehkiagndl 490
                 64555555555555554444333323555666666777887766678999999999999999999999999999999999999999999999******* PP

                 .................................................................HHHHH.HHHHHHHHHHHHHTHHHHHHHHHHHHHH CS
                 .................................................................xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III 152 .................................................................ieale.qelfqelleeveealerlrrlaealaeL 184
                                                                                  +++++ ++l++e++   +++++++++la +la+L
  KHJ31578.1 491 nqdiekklflenhkthgwclrltraeagcirnnkkyhecstqkngvyfttsklqslrrefdqlseNYNRTqSSLVSEVIGVAASYCPVIESLAGVLAHL 589
                 *************************************************************988855554366777777777789************** PP

                 HHHHHHH CS
                 xxxxxxx RF
    MutS_III 185 DvllSlA 191
                 Dv++S+A
  KHJ31578.1 590 DVIVSFA 596
                 ******9 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 2.5
                 HHHHHHB-SS- CS
                 xxxxxxxxxxx RF
    MutS_III 129 elleeaideep 139
                 e+le+a++ ++
  KHJ31578.1 715 EMLETANILKS 725
                 33443333333 PP

>> MutS_II  MutS domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.2   3.7e-24   7.4e-21       3     136 ..     135     276 ..     133     277 .. 0.89

  Alignments for each domain:
  == domain 1  score: 74.9 bits;  conditional E-value: 3.7e-24
                 EEEEEEE...TTTSEEEEEEEETTTTEEEEEEEEE...-HHHHHHHHHH-ESEEEEESS-SCCCHHHHHHCHCTTT-EEEEESCCCCSHCCHHHHCHHH CS
     MutS_II   3 laAisek...regrrvGlafiDlstgefvvsefed...feeleaeLsrlsPkElllpedlsestaeeessklrelrsrvgvretvefesekaserleed 95 
                 +++++ +    e+r+vG++f D s +e++v+ef d   ++++e++L +l++kE++++   se+++  e+ k++ +++++g   ++  +s+++++++e+d
  KHJ31578.1 135 ILSVKFStktTEARTVGVCFTDASVRELGVCEFLDndiYSNFESLLIQLGIKECIIQAEKSEKDV--ELKKIKAVIDKCGISLSERPSSDFSTKDIEQD 231
                 566444444678899************************************************88..*******************************9 PP

                 B--STTTTTTT.....GGG-HHHHHHHHHHHHHCCCCCSCCCCT-C CS
     MutS_II  96 fsvedldgfgl.....ekekklalaAlgalisYleetqkekelshl 136
                 +s  + +++ +     e+ +k a+++++ali+Yl  ++++++++++
  KHJ31578.1 232 LSRLL-KDVDFvgnlpESDLKFAMSSAAALIKYLGIMHDSSNFGQY 276
                 97655.666777789*********************9999887766 PP

>> MutS_IV  MutS family domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.4   2.9     4e-20     8e-17       1      91 [.     460     555 ..     460     556 .. 0.97

  Alignments for each domain:
  == domain 1  score: 61.4 bits;  conditional E-value: 4e-20
                 TTSHHHHHHHHHHHHHHHHHHHHHCCCCCCCT-...TTBEECCCSSSEEEEEE-TCCCTTT--..SEEEEEECTCEEEEECCCHHHHHHHHHHHHH CS
     MutS_IV   1 gfdeeLdelrdrleelekeleeleekereklgi...kslkveynkvlGyylevtrseakkvpk..efirlqtlknseryttaelkkleaelleaee 91 
                 +fde+L+ +r+rle+ + e+e++++  +++l++   k+l +e++k++G++l++tr ea ++++  ++ +++t+kn++++tt +l++l +e+ ++ e
  KHJ31578.1 460 EFDEKLQLIRKRLEKSRFEMEREHKIAGNDLNQdieKKLFLENHKTHGWCLRLTRAEAGCIRNnkKYHECSTQKNGVYFTTSKLQSLRREFDQLSE 555
                 69*******************************99**************************8889**************************99876 PP

>> MutS_I  MutS domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.5   0.0   1.2e-17   2.4e-14       2     111 ..      14     120 ..      13     122 .. 0.91
   2 ?    2.0   0.0      0.12   2.5e+02      59      88 ..     814     843 ..     788     869 .. 0.78

  Alignments for each domain:
  == domain 1  score: 53.5 bits;  conditional E-value: 1.2e-17
                 HHHHHHHCCCHH-TTCEEEEEETTEEEEECHHHHHHHHHCSSSSTT.E..SSSSC..EEEEEEEHHHHHHHHHHHHHT.T-EEEEEEE-S-HHHHS.S- CS
      MutS_I   2 plmkqylelkkkykdavlffrvGdfYelfgeDAviaareleitltkrk..ksseke.ipmagvPehalekylrkLvek.gykVavveqtetpaekkgvv 96 
                 ++++++ +l+++++d+v++f++Gd+++++geDA ++ar++++t+++ +  ++ + + +p+++++ +  +++l++ + + g+kV+++ +        g  
  KHJ31578.1  14 GFIRFFRSLQNDQNDIVRIFDRGDYFTAHGEDASLIARTVYKTTSVLRylGKDDLTgLPSVTMTPTVYKNFLKEALFQlGKKVEIWANQ-------GRN 105
                 689*******************************************998744445569***************999988*******999.......568 PP

                 -EEEEEEEBTTC-TT CS
      MutS_I  97 krevvrviTpGtltd 111
                 ++ +++ ++pG+++d
  KHJ31578.1 106 SWLISKRASPGNIQD 120
                 99*********9998 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.12
                 EEEEHHHHHHHHHHHHHTT-EEEEEEE-S- CS
      MutS_I  59 agvPehalekylrkLvekgykVavveqtet 88 
                 +gv +h++  +++++v+   kV ++   + 
  KHJ31578.1 814 SGVCDHSFGIHVAEIVRFPEKVIRMAKQKA 843
                 79***************9777665544433 PP

>> ArdA  Antirestriction protein (ArdA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.5   2.5e-05     0.049      14     142 ..     327     449 ..     323     460 .. 0.60
   2 ?   -1.7   0.2       1.9   3.9e+03      83     110 ..     764     795 ..     743     886 .. 0.54

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.5e-05
        ArdA  14 lhGeWldlp.adaeelqealkaisaeeedeEwaihDyeglpeaslge..yesidelnela....klleeleehgeafaawvehfgdleeledafeeeyl 105
                 l  +Wl+ p +++ee+++  +         E ++ D e l  ++++e   +si++l +la    ++++ le+  +a+ ++ +  g ++++ed ++e+y 
  KHJ31578.1 327 LLAQWLKQPlMSKEEIENRQQL---V----EAFVEDSE-LR-QTIQEehLKSIPDLYRLArkfqRKQAGLEDVVRAWQVVSALPGFIKTFEDVMDEKYK 416
                 7789999999999999977666...4....9*******.43.555555566666666666300233333333344555555445567777777777777 PP

        ArdA 106 geydsledyAeelveelgllkeeeipeslenYfDyea 142
                 +++d  ++y  +l e lg+l  e+++e +e  +D++a
  KHJ31578.1 417 DHLD--TAYTTKLKEYLGSL--EKLQEMVEMTVDLDA 449
                 7764..35566666666633..455555555566655 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.9
        ArdA  83 faawvehfgdleeledafee....eylgeyds 110
                 fa+++ hf++l  l+++f +    + + ++d+
  KHJ31578.1 764 FAMFATHFHELTALSENFAQvenlHVVAHIDD 795
                 44444444433333333332211222222222 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00011      0.22      13      46 ..     636     669 ..     628     674 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00011
      AAA_27  13 kftdrsldfsaeeadlhliyGpNEAGKstalrAi 46 
                 +f  + +++ ++++++ +i GpN  GKst +r i
  KHJ31578.1 636 QFISNDVTLCHDSSEFLIITGPNMGGKSTYIRQI 669
                 677888999999*****************99866 PP

>> Peptidase_M16  Insulinase (Peptidase family M16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.1   0.00027      0.54      90     132 ..     327     368 ..     313     382 .. 0.77
   2 ?   -2.7   0.0       2.5   5.1e+03      80     107 ..     702     729 ..     671     737 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00027
                    HHHHHHHSBTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH CS
  Peptidase_M16  90 vladvfkaplleesevererkvvekeveavdaepekvveenlh 132
                    +la+++k+pl++++e+e  ++ ve+ ve+ + ++  + ee+l+
     KHJ31578.1 327 LLAQWLKQPLMSKEEIENRQQLVEAFVEDSELRQ-TIQEEHLK 368
                    79****************6667776666665555.55555554 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.5
                    EGGGHHHHHHHHHHHHHSBTTSHHHHHH CS
  Peptidase_M16  80 lskdlekaldvladvfkaplleesever 107
                     +++l+++  ++a+++  + + +s++++
     KHJ31578.1 702 SDSQLKGVSTFMAEMLETANILKSATSE 729
                    4566788888888888888888887776 PP

>> SUR7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00013      0.26      60     138 ..     507     589 ..     500     623 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00013
        SUR7  60 gyC..........dnsdvnytkCskpkagypfdp..leelnsesngkvdlPsnlrktlsklnnltkalfilhiialvlsfislvv...gllaic 138
                 g+C            ++++y++Cs +k g  f++  l++l +e ++   l +n++ t s         ++  +i++++s + ++    g+la++
  KHJ31578.1 507 GWClrltraeagcIRNNKKYHECSTQKNGVYFTTskLQSLRREFDQ---LSENYNRTQSS--------LVSEVIGVAASYCPVIEslaGVLAHL 589
                 788888888888899**************99996556888888885...89999999987........66666666666664444111444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (922 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       852  (0.0475208); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.41
# Mc/sec: 6682.95
//
Query:       KHJ31579.1  [L=477]
Description: putative trna m g methyltransferase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-26   93.4   0.9    9.5e-22   77.6   0.0    2.7  3  tRNA_m1G_MT  tRNA (Guanine-1)-methyltransferase


Domain annotation for each model (and alignments):
>> tRNA_m1G_MT  tRNA (Guanine-1)-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.6      0.22     4e+03     156     193 ..      63      98 ..      37     104 .. 0.62
   2 !   13.7   0.0   2.2e-06     0.039       2      47 ..     184     229 ..     183     242 .. 0.91
   3 !   77.6   0.0   5.3e-26   9.5e-22      62     195 .]     349     462 ..     303     462 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.22
                  CTTSEHHTEHHHHHHHHHCCCTTTHHHHHHHHHHHSCS CS
  tRNA_m1G_MT 156 trpltlrglkVpeiLlsgnhakienWrlkealertvpr 193
                  +rpl+ +  +  +i ls n+   ++ ++ e+ e+t   
   KHJ31579.1  63 SRPLEREEDQTTNIQLSKNQ--LKKLKRREKWEETREL 98 
                  56666666666666666666..6666666666666554 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 2.2e-06
                  GGSHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEETSSHHHHHHHHH CS
  tRNA_m1G_MT   2 kkasekelvslevqllrdytanrrntvddelygggagmvlkaepel 47 
                  +++ eke+ sl +ql+r+y+ n+ ++   +l++   g  lk++ e 
   KHJ31579.1 184 ELMTEKEIISLGSQLTRCYSLNKSAPYRVHLMVSSWGGTLKSRFEN 229
                  579*********************************9999998775 PP

  == domain 3  score: 77.6 bits;  conditional E-value: 5.3e-26
                  EEESSCGGHHHHCCCHHHCGGGEEEEETTTSSBECCGGTTSSEEEEEESSSSTTCSTTHHHHHHHHHHHHTTTC.EEB-S-CCC...CHCTS..CTTS CS
  tRNA_m1G_MT  62 lltptGkkftqelaeeLsekeklvylcgdyegvdervdddkvdeysIGdfVlkggekgalvlidavkrllaGvlntaslpedsfsnrllekpnytrpl 159
                     p+  ++  ++++ +s++ ++vyl+ d+++++ ++++++   y++G++V+k++ kg+    + +++ + G+  ta+lp+ ++   +++++  + +l
   KHJ31579.1 349 SSNPE--PLAHQQMSPISTTPSIVYLTSDSPNTLSSLVPNT--SYIVGGIVDKNRHKGI----CYKRACERGIQ-TAKLPIGEY---MKMQS--RTVL 432
                  33333..5567777789************************..****************....***********.*********...99999..9*** PP

                  EHHTEHHHHHHHHHCCCTTTHHHHHHHHHHHSCSXS CS
  tRNA_m1G_MT 160 tlrglkVpeiLlsgnhakienWrlkealertvprRk 195
                  +++  +V+ei+l++ +  +++W   ea+++++p+Rk
   KHJ31579.1 433 AVN--HVVEIMLKWLE--TNDW--GEAFLKVIPKRK 462
                  ***..***********..****..***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1900  (0.105974); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 3365.17
//
Query:       KHJ31580.1  [L=391]
Description: putative base excision dna repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-08   34.2   0.0    5.6e-08   33.2   0.0    1.5  1  HhH-GPD   HhH-GPD superfamily base excision DNA repair protei
    0.00027   20.7   0.0     0.0017   18.2   0.0    2.3  2  HHH       Helix-hairpin-helix motif
  ------ inclusion threshold ------
      0.075   12.6   0.4       0.25   10.9   0.2    1.8  2  DUF4843   Domain of unknown function (DUF4843)


Domain annotation for each model (and alignments):
>> HhH-GPD  HhH-GPD superfamily base excision DNA repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0   9.3e-12   5.6e-08       1     106 [.     125     271 ..     125     273 .. 0.94

  Alignments for each domain:
  == domain 1  score: 33.2 bits;  conditional E-value: 9.3e-12
                 HHHHHHTTS-HHHHHHHHHHHHHHHS.HCSHHHHHHSHHHHHHHHHTTSTTHHHHHHHHHHHHHHHH................................ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................ RF
     HhH-GPD   1 vsailsqqtsderanriierlferfg.fptpedladadeekLrelirelGfyrrKakyikelArilv................................ 66 
                 v++ilsq+t+ ++ +r+   + e +g + + +++ +  ++kL+e i++ G++ +K + i  +  ++                                 
  KHJ31580.1 125 VRTILSQNTNGKNSTRAKLCMDEVYGkCDNWKAIVAGGQSKLQETIKCGGLSANKSRAILGILNQVYekyntyslnhlhkksndeamqellsfpgvgpk 223
                 789*************9999999999888********************************************************************** PP

                 ..........S-SSS--TTSHHHHHHHHHHTTSSSSTTHHHHHHHHHHHH CS
                 ..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     HhH-GPD  67 ..........gkpdvlivvDvhvrrilkrlrsikekktkkkvekkleell 106
                           ++  + ++vD+hv+r+ + l++  ek t++++ ++l + +
  KHJ31580.1 224 tascvllfclQR--ESFAVDTHVWRLSGLLGWRPEKATRDETFRHLDQRI 271
                 *********643..48**************************99997765 PP

>> HHH  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   2.8e-07    0.0017      10      30 .]     211     231 ..     203     231 .. 0.87
   2 ?   -1.0   0.1      0.33     2e+03       3      17 ..     313     327 ..     311     327 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 2.8e-07
                 HHHHHTSTT-SHHHHHHHHHH CS
         HHH  10 reeLlalPGVGpktAeaIlsy 30 
                 + eLl+ PGVGpktA ++l +
  KHJ31580.1 211 MQELLSFPGVGPKTASCVLLF 231
                 5699999***********976 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.33
                 HHHHTSSHHHHHTST CS
         HHH   3 eglipasreeLlalP 17 
                 ++  +a +eeL++++
  KHJ31580.1 313 NNGEDAIEEELEKVK 327
                 56666778****996 PP

>> DUF4843  Domain of unknown function (DUF4843)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.32   1.9e+03     123     150 ..     136     161 ..     132     174 .. 0.77
   2 ?   10.9   0.2   4.1e-05      0.25      86     133 ..     322     368 ..     316     373 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.32
     DUF4843 123 keqnslkilltnrlekPawWeelalelG 150
                 k+++++k+ + + + k  +W+ +    G
  KHJ31580.1 136 KNSTRAKLCMDEVYGKCDNWKAI--VAG 161
                 567889999***********886..333 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 4.1e-05
     DUF4843  86 vlvslpvivyntdteLeketlvlelklkasedlklglkeqnslkillt 133
                  l ++++ ++++d e e +tl l+l++k+ +d+k+ l ++ +lk+  +
  KHJ31580.1 322 ELEKVKIEIKKED-EGEGQTLNLKLEIKEDDDIKPNLGNEIKLKMNSN 368
                 567899*****99.99**********************9999997655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       803  (0.0447878); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2990.29
//
Query:       KHJ31581.1  [L=279]
Description: putative phb1 prohibitin 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-24   86.6   7.1    4.4e-24   85.5   7.1    1.6  1  Band_7         SPFH domain / Band 7 family
    0.00021   20.5   3.4    0.00027   20.1   3.4    1.2  1  YdfA_immunity  SigmaW regulon antibacterial


Domain annotation for each model (and alignments):
>> Band_7  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.5   7.1   4.9e-28   4.4e-24       3     168 ..      29     207 ..      27     217 .. 0.90

  Alignments for each domain:
  == domain 1  score: 85.5 bits;  conditional E-value: 4.9e-28
      Band_7   3 ieegevgvvvrfGklsr....vlepGlhfilPfgrsvtvvsvrvqtldvsvsltvptkDglpvtidvtviyrv.pddapklvaaveresanldnlirrv 96 
                 ++ g ++v+  f++ls+    v + G+hf +P++++ ++++vr+   ++s   t+ +kD ++v ++ +v  r    + pk+++++  ++++ ++++ ++
  KHJ31581.1  29 VKGGTRAVI--FDRLSGvkdtVMNEGTHFLIPWLQKSIIYDVRTKPRNIST--TTGSKDLQMVSLTLRVLHRPeVHQLPKIFQNL--GQDYDERVLPSI 121
                 8899*****..7777776777******************************..****************887766**********..************ PP

      Band_7  97 lesalrevisemtleellsnreelaeelknelneqlrkyGvevldvritdidpppevaqalaakqaaeaea..............q 168
                  +++l++++++++++el+  re++ ++++ +l ++++++++ ++dv+it+ ++ +e+ +a+++kq a+++a              q
  KHJ31581.1 122 GNEVLKSIVAQFDAAELITQREAVSNRIRSDLLKRAQEFNIALEDVSITHMTFGKEFTRAVEQKQIAQQDAerarfivekaeqerQ 207
                 ***********************************************************************988776654444444 PP

>> YdfA_immunity  SigmaW regulon antibacterial
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   3.4     3e-08   0.00027     152     283 ..     104     230 ..      65     248 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 3e-08
  YdfA_immunity 152 nierlvGgageetiiarvGegivttiGsaeshkevlenPdsisktvlekgldagtafeilsidiadvdvgenigaklqadqaeadkkiaqakaeer 247
                    +i + +G   +e ++  +G+ ++++i +  +  e++ + +++s+++ +  l  +  f+i    + dv++++      +  +a  +k+iaq  ae+ 
     KHJ31581.1 104 KIFQNLGQDYDERVLPSIGNEVLKSIVAQFDAAELITQREAVSNRIRSDLLKRAQEFNIA---LEDVSITHMT-FGKEFTRAVEQKQIAQQDAERA 195
                    55666899999******************************************9999875...6667776543.33366789999*********** PP

  YdfA_immunity 248 ramavakeqemkakvqemrakvveaeaevPkalaea 283
                    r +   +eqe +a++ +++ +   ae  + ka+a+a
     KHJ31581.1 196 RFIVEKAEQERQANIIRAEGEAESAE-TISKAVAKA 230
                    **************999888876665.588999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1950.96
//
Query:       KHJ31582.1  [L=1087]
Description: putative ulp1 protease family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-37  129.2   0.4    4.4e-37  128.0   0.4    1.6  1  Peptidase_C48  Ulp1 protease family, C-terminal catalytic dom


Domain annotation for each model (and alignments):
>> Peptidase_C48  Ulp1 protease family, C-terminal catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.0   0.4   2.5e-41   4.4e-37       1     196 [.     792    1051 ..     792    1069 .. 0.93

  Alignments for each domain:
  == domain 1  score: 128.0 bits;  conditional E-value: 2.5e-41
                     ---BHHHHHHHHHHHHHHHHH.CCCTCCCEEE--THHHHHHC..........SS.......TCHCHHHCTTCCCCCS..-GGG-SEEEEEEEC. CS
  Peptidase_C48    1 ewlndtvidfylkllaerles.seskaervhflntffvskLtkavkdfkknkskkkfkeskkkdlyngvrrwtrkvnkedlfdkdiiyiPined 93  
                     e+lnd  ++fyl+ l++++e+ s++ a+rv+f ntff+ +Lt             + + +k   +y +v+rwt kv    lf+ d+i++Pine 
     KHJ31582.1  792 EFLNDNLMMFYLRWLQQKVEQeSPEIAKRVYFHNTFFYERLT-------------SIERGKSGINYENVERWTSKV---KLFEYDYIVVPINE- 868 
                     68****************************************.............22223335679**********...**************. PP

                     TTEEEEEEEETCCC................................................................................ CS
  Peptidase_C48   94 gkHWvlliinlpdk................................................................................ 107 
                     ++HW+++ i++  k                                                                                
     KHJ31582.1  869 NFHWYVALICNAPKllgksknsgeafessesiqgsdvdtvmnrmslsnkfeenydsetdpvlltnsdveivqavspkkqkkqseyplvntdsqk 962 
                     ********************************************************************************************** PP

                     ......EEEEE-TTS-SSH.HHHHHHHHHHHHHHHHHCCCCCSTT-.GGGEEEEEEE-----SSCCCHHHHHHHHHHHHHCTHHCHHHHHSS.H CS
  Peptidase_C48  108 ......tililDSlislhtvkkenrpinnlkpyLleealkkkqkqldltpfeierltkvpqqknsgDCGiyvlkfiellaegapqessvtltek 195 
                           +i++lDS++ +h+      +++nlk+yLl+e++ k +  +d +    ++++ +pqq+n++DCG++vl +ie++++++    s+ l ++
     KHJ31582.1  963 kissdpRIITLDSFGRSHS-----LTCTNLKKYLLREVESKLNTTIDDPGNLGKTAKHIPQQDNFSDCGLFVLGYIEIFLRNPDNFVSD-LLRN 1050
                     *******************.....**************9999999999999999999***********************998766555.4444 PP

                     H CS
  Peptidase_C48  196 d 196 
                      
     KHJ31582.1 1051 K 1051
                     4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1087 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       751  (0.0418874); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.31s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 7257.84
//
Query:       KHJ31583.1  [L=770]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.05   13.0   0.1       0.05   13.0   0.1    2.0  2  DUF4746   Domain of unknown function (DUF4746)


Domain annotation for each model (and alignments):
>> DUF4746  Domain of unknown function (DUF4746)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   2.8e-06      0.05     160     201 ..     124     165 ..     119     168 .. 0.93
   2 ?   -3.0   0.6      0.21   3.7e+03      91     105 ..     491     505 ..     466     544 .. 0.42

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.8e-06
     DUF4746 160 kaaliyvlFraqtekflppdpvpepPhiimaFdasKkkdvae 201
                 +aa+++++ r+ ++kf + d+ p pP i  +F+ +K++ + +
  KHJ31583.1 124 EAAALQIYLRQAISKFAAHDSSPTPPPIPSKFQQKKQSGIHK 165
                 799*********************************998876 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.21
     DUF4746  91 kektkakeaeltade 105
                 +++ ka ++e++ ++
  KHJ31583.1 491 EAELKAANTEESRSN 505
                 111111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (770 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       897  (0.0500307); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 5248.07
//
Query:       KHJ31584.1  [L=195]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       871  (0.0485805); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.29s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1335.82
//
Query:       KHJ31585.1  [L=323]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.06   12.7   0.9      0.078   12.4   0.9    1.3  1  AAR2      AAR2 protein
      0.072   11.8   0.3       0.11   11.2   0.3    1.2  1  MSP1_C    Merozoite surface protein 1 (MSP1) C-terminus


Domain annotation for each model (and alignments):
>> AAR2  AAR2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.9   8.7e-06     0.078     114     206 ..     157     262 ..      65     272 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8.7e-06
        AAR2 114 ekWksltshIteellerilp...esgkisstaelasseseaes..............ekkkawskssseeskgss..akrdeeelpslkskegtelrFt 193
                  k+k  t+ +t ++  +i +   ++++++++ +l + ++                  +   + + s +++   +s  ++r +++ +s+++++ +++ F+
  KHJ31585.1 157 GKYKTTTNEVTVAIPRTIKGavtSEENTQQAHKLPKPPQ---LnertwatvarngqkK--ARVTLSMKTQAVPTSkaTQRVTNKRNSITTAPTDQILFV 250
                 348888888885555555552113333333333333333...2445888888877431..3333322222221113466778899999999999999** PP

        AAR2 194 eiplkrtwpegat 206
                 +ip++++w++  +
  KHJ31585.1 251 RIPQEHEWRKL-S 262
                 *********53.3 PP

>> MSP1_C  Merozoite surface protein 1 (MSP1) C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   1.2e-05      0.11     224     321 ..      90     186 ..      85     201 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 1.2e-05
      MSP1_C 224 eelkeliknknytGkknsdnvkevke..aleaykellPkvstseaavttavtadaavpdatPeglsvrgagvsGavkeetpepvagsv.asgltelqvv 319
                 +el e++ n++++   n  +  e +e  al+ay +l     ++ aav t+ +++       P   s++g+g   ++++e+  ++++++ ++ +t ++ +
  KHJ31585.1  90 KELAEIVANRQHSTLANITDDIEKEEafALKAYLQLA---IANFAAVDTSPAPPQIPSYSRPTKFSGHGSGKYKTTTNEVTVAIPRTIkGA-VTSEENT 184
                 799********99877755555555511566666664...588999999999997778899***********9*******99999999444.4444444 PP

      MSP1_C 320 vk 321
                  +
  KHJ31585.1 185 QQ 186
                 33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2321.97
//
Query:       KHJ31586.1  [L=126]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0078   16.3   2.4       0.01   15.9   2.4    1.2  1  ArfGap          Putative GTPase activating protein for Arf
  ------ inclusion threshold ------
       0.15   11.5   6.1        5.8    6.5   0.2    2.7  2  zf-ribbon_3     zinc-ribbon domain
       0.19   10.6   0.0       0.22   10.4   0.0    1.1  1  tRNA-synt_1c    tRNA synthetases class I (E and Q), catalytic
       0.42   10.5   8.2       0.14   12.0   1.6    2.5  2  zf-CCHC_6       Zinc knuckle
        2.6    7.9   8.8        7.7    6.4   1.4    2.5  2  zinc_ribbon_2   zinc-ribbon domain
        3.1    8.0  10.3        7.2    6.9   1.6    2.6  2  zf-CCHC         Zinc knuckle
        3.6    7.3   7.2         11    5.8   7.2    1.9  1  DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
        5.4    7.0  11.0        3.2    7.7   8.0    2.1  2  OrfB_Zn_ribbon  Putative transposase DNA-binding domain


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   2.4   4.5e-06      0.01      15      91 ..      13      87 ..       2     109 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.5e-06
                B-TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG CS
      ArfGap 15 vCaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekr 91
                 C +Cg+k+ +   l ++++ C +C g Hrs  ++    r ++    ++e+++ +++ g+++++++l ak  +e+  
  KHJ31586.1 13 SCGNCGSKNHS-EDLCMATTKCRNCGGPHRSD-SRRCLARPTRSGAPTKEQMKAFRQAGEREFQAVLRAKAAEESAT 87
                7****888765.466677889**********8.66778899999**************************9877766 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   1.7    0.0026       5.9      14      25 ..       9      20 ..       5      21 .. 0.87
   2 ?    6.5   0.2    0.0026       5.8      17      25 ..      31      39 ..      30      45 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0026
  zf-ribbon_3 14 sddnvCpyCGtk 25
                 s+++ C +CG+k
   KHJ31586.1  9 SRAPSCGNCGSK 20
                 57899*****87 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0026
  zf-ribbon_3 17 nvCpyCGtk 25
                 ++C +CG++
   KHJ31586.1 31 TKCRNCGGP 39
                 689999976 PP

>> tRNA-synt_1c  tRNA synthetases class I (E and Q), catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0    0.0001      0.22     126     175 ..      57     106 ..      36     114 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.0001
                   HHHHHHHHHHTTHSTTTS-EEEESSBTTSSGGGSSTEEEEEEESGGGSBT CS
  tRNA-synt_1c 126 nlklfeeemkkgkaegekavvRlkideessvefrDlvrgriklepqeihd 175
                     k   +  ++  +++ +av+R+k  ees +  +D   g+i+ +  e++ 
    KHJ31586.1  57 PTKEQMKAFRQAGEREFQAVLRAKAAEESATSAEDFSVGKISSQTTEVDA 106
                   3333334445555666789************************9999875 PP

>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.6      0.09     2e+02       4       9 ..      14      19 ..      13      24 .. 0.84
   2 ?   12.0   1.6   6.4e-05      0.14       3      19 ..      32      47 ..      30      67 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.09
   zf-CCHC_6  4 CknCGA 9 
                C+nCG 
  KHJ31586.1 14 CGNCGS 19
                ****96 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 6.4e-05
   zf-CCHC_6  3 KCknCGAFGHtarSkrC 19
                KC+nCG   H+  S+rC
  KHJ31586.1 32 KCRNCGG-PHRSDSRRC 47
                9*****9.5******** PP

>> zinc_ribbon_2  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   1.4    0.0035       7.7      13      22 ..      11      20 ..       7      25 .. 0.70
   2 ?    5.4   1.0     0.007        16       1      16 [.      32      47 ..      32      48 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0035
  zinc_ribbon_2 13 akFCpyCGtp 22
                   a+ C +CG++
     KHJ31586.1 11 APSCGNCGSK 20
                   5667777765 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.007
  zinc_ribbon_2  1 fCpnCGaelqdnakFC 16
                   +C nCG ++  +++ C
     KHJ31586.1 32 KCRNCGGPHRSDSRRC 47
                   7999997777777766 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   1.7    0.0093        21       2      11 ..      13      22 ..      12      27 .. 0.87
   2 ?    6.9   1.6    0.0032       7.2       2       9 ..      32      39 ..      32      39 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0093
                CTSSSSSSSS CS
     zf-CCHC  2 kCynCGepGH 11
                 C nCG+  H
  KHJ31586.1 13 SCGNCGSKNH 22
                699******9 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0032
                CTSSSSSS CS
     zf-CCHC  2 kCynCGep 9 
                kC+nCG+p
  KHJ31586.1 32 KCRNCGGP 39
                7*****86 PP

>> DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   7.2    0.0048        11       3      24 ..      14      37 ..      13      42 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0048
                    -SSS--B--..--SSS----SSS- CS
  DNA_RNApol_7kD  3 CgeCgaevs..lkkgdpiRCkeCG 24
                    Cg+Cg+++   +   +  +C++CG
      KHJ31586.1 14 CGNCGSKNHseDLCMATTKCRNCG 37
                    ******9985566789*******9 PP

>> OrfB_Zn_ribbon  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   8.0    0.0014       3.2      30      60 ..      13      44 ..       3      49 .. 0.89
   2 ?   -0.6   0.0      0.57   1.3e+03       2      15 ..      71      84 ..      71     103 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0014
  OrfB_Zn_ribbon 30 tCseCgsknke.alsgrtfkCpnCgfeadrDv 60
                    +C +Cgskn   +l   t kC+nCg  +  D 
      KHJ31586.1 13 SCGNCGSKNHSeDLCMATTKCRNCGGPHRSDS 44
                    6********999*************9888885 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.57
  OrfB_Zn_ribbon  2 rklkeqleykakey 15
                    r+++  l+ ka e+
      KHJ31586.1 71 REFQAVLRAKAAEE 84
                    57999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1041  (0.0580624); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 917.95
//
Query:       KHJ31587.1  [L=349]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       464  (0.0258799); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2600.10
//
Query:       KHJ31588.1  [L=93]
Description: putative proteinase inhibitor propeptide [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 724.46
//
Query:       KHJ31589.1  [L=438]
Description: putative mitochondrial pyruvate dehydrogenase kinase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.9e-39  133.3   0.4    9.6e-39  132.8   0.4    1.2  1  BCDHK_Adom3  Mitochondrial branched-chain alpha-ketoacid dehy
    1.7e-12   47.8   0.0    2.2e-11   44.2   0.0    2.4  2  HATPase_c    Histidine kinase-, DNA gyrase B-, and HSP90-like
  ------ inclusion threshold ------
      0.029   14.2   0.0      0.095   12.5   0.0    1.8  1  HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like


Domain annotation for each model (and alignments):
>> BCDHK_Adom3  Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.8   0.4   1.6e-42   9.6e-39       2     160 ..      60     227 ..      59     229 .. 0.89

  Alignments for each domain:
  == domain 1  score: 132.8 bits;  conditional E-value: 1.6e-42
  BCDHK_Adom3   2 vslrqlvqfgekpst.gtllksaqflreelpirlAhrvkelenlPdglvenpsvkkvkdwYaqsfeellelpkp.e..leenekftelLekikkrHdd 95 
                  +sl +lv+ g+ p + + l++sa+f+++ lp+rlA ++k++ +lP++ v np+++k++++Y++s+++ll+++ + +  l+e+ +ft++L k+++ H++
   KHJ31589.1  60 ISLGDLVKNGRVPIStKALFSSANFTLSLLPVRLAYQIKAIWHLPFITVANPNISKIYNNYLNSLSTLLSYDFKcItkLDEEFRFTKALIKLVESHSH 157
                  89*********9966788*****************************************************8876246******************** PP

  BCDHK_Adom3  96 vvttlaqGvlelkekrkrkqidseiqsFLdrfymsRIgiRmLieqhiaLteqsks.........kkepsdyvGi 160
                  ++++laqG+le+++     +  +++ +FLd++++ RIg+R+++eqhia++++  +         ++ +s+++Gi
   KHJ31589.1 158 NLSILAQGFLECRKY----MSPKQVAKFLDEHLQMRIGTRLIAEQHIAIHNSFYQqqvsnsdshHRISSRFIGI 227
                  *************88....68899***************************98776666554433333555665 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       2.9   1.7e+04      53      64 ..     198     212 ..     193     221 .. 0.58
   2 !   44.2   0.0   3.7e-15   2.2e-11       4     109 ..     274     431 ..     272     433 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 2.9
                 HHTGTCSTTCH...H CS
   HATPase_c  53 dlkklfekfsq...d 64 
                 ++  ++ +f+q   +
  KHJ31589.1 198 QHIAIHNSFYQqqvS 212
                 444588888884321 PP

  == domain 2  score: 44.2 bits;  conditional E-value: 3.7e-15
                 HHHHHHHHHHHHHHHHHHSTTT....EEEEEEEE...............EE..........TEEEEEEEESSSSSTTHHHTGTCS.TTCH......... CS
   HATPase_c   4 krLrqiisnlvdNavkfatkag....eieveika...............se..........ddlvisveDnGiGipkedlkklfe.kfsq......... 63 
                  +L+ ++ +l++Na +++t+++     i+++i++               +             ++i+++D G Gi+ e+l+++   +f++         
  KHJ31589.1 274 GHLQYMLTELLKNAFRATTENDmcqePITITISSvpttfnnscqlassnNGiyqnkheypaFGITIRIRDRGGGISSEKLPHIWSySFTTfseenirrg 372
                 689*************955444455577999998888887776666554004445567888********************555555555555777777 PP

                 .............HCSTCHTSTSSSHHHHHHHHHHHHTTTEEEEEEETTTEEEEEEEEE CS
   HATPase_c  64 .............ddstkrggggtGlGlsivkklvelmgGeiwvesepgrGttftftlp 109
                              ++ ++++  g G+Gl +++ +++ +gG++ v+s  g G++++++l+
  KHJ31589.1 373 rsgrgnefkvnldAGLRSDSIAGLGYGLPLARTYAQYFGGSVCVHSLHGWGCDVYLRLK 431
                 777777777788767888889**********************************9986 PP

>> HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.6e-05     0.095       5      76 ..     278     377 ..     275     382 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.6e-05
  HATPase_c_3   5 kAlaelvdNsldAdaen............................vkievnknrgkt.......geivieDdGkGmseeelknalrlatsskeakrks 67 
                  + l+el++N++ A  en                              i+ n     +        +i+i+D G G+s e+l    ++  ++ ++  ++
   KHJ31589.1 278 YMLTELLKNAFRATTENdmcqepititissvpttfnnscqlassnNGIYQN-----KheypafgITIRIRDRGGGISSEKLPHIWSYSFTTFSE--EN 368
                  5699*******************7766666555555554444443222222.....133445558999************99855544444442..34 PP

  HATPase_c_3  68 tslGkkGiG 76 
                    +G+ G G
   KHJ31589.1 369 IRRGRSGRG 377
                  445555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       371  (0.0206927); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 3543.56
//
Query:       KHJ31590.1  [L=504]
Description: putative pdi related protein a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.2e-17   61.5   0.3    3.9e-08   33.2   0.0    2.6  2  Thioredoxin    Thioredoxin
     0.0051   17.2   0.0       0.79   10.2   0.0    2.7  2  Thioredoxin_2  Thioredoxin-like domain
  ------ inclusion threshold ------
      0.096   13.0   0.0        4.2    7.8   0.0    2.8  2  Thioredoxin_8  Thioredoxin-like
        3.2    5.8  30.9        4.6    5.2  30.9    1.2  1  Hid1           High-temperature-induced dauer-formation prote


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.0   8.8e-12   3.9e-08      38     101 ..       2      72 ..       1      74 [. 0.87
   2 !   25.8   0.1   1.8e-09   8.1e-06      36     102 ..     110     179 ..     107     180 .. 0.89

  Alignments for each domain:
  == domain 1  score: 33.2 bits;  conditional E-value: 8.8e-12
                  HHHHHHHHHCTT..TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTE.....EEEEEESS-HHHHHHHHH CS
  Thioredoxin  38 Peleklaeelkd..kvklakvdvdenedlakkyevegiPtlklfkngk.....evkkyegarekeklaafl 101
                  P++ek+a++l++  kv  ++++ ++n++ +++ +++g+Ptl ++k gk      v++y+gar+++++++++
   KHJ31590.1   2 PTYEKVAQRLAGlaKVAAVNCEKESNRHFCDQAGIRGFPTLNIVKPGKtagkpIVQEYNGARSAKEIVETV 72 
                  99**********66666666666778899******************988888899**********99876 PP

  == domain 2  score: 25.8 bits;  conditional E-value: 1.8e-09
                  HHHHHHHHHHHCTTTSEEEEEETTT.SHHHHHHTT-SSSSEEEEEETTE..EEEEEESS-HHHHHHHHHH CS
  Thioredoxin  36 laPeleklaeelkdkvklakvdvde.nedlakkyevegiPtlklfkngk..evkkyegarekeklaaflk 102
                  ++P l++la e+k+ +k+ +  v + n+d+ kkye++ +Pt++l+k g+  e  +y+ + +k+ l++fl+
   KHJ31590.1 110 INPLLKALAIEFKGSIKFSHAQVSKdNKDIEKKYEIKKLPTIMLVKRGEtdEFLRYDDEMKKDILVEFLS 179
                  89************999999998643789*******************9777889999999999999986 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00018      0.79      51     106 ..      18      69 ..       4      72 .. 0.81
   2 ?    4.2   0.0     0.013        57      66      96 ..     133     165 ..      78     178 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00018
  Thioredoxin_2  51 vaiwcakekkkafkdieenvelarkygvrgtPt.ivfldgk....eivarlpGyvpaeele 106
                    +a+ c+ke         +n+ + ++ g+rg+Pt  ++ +gk     iv ++ G+ +a+e+ 
     KHJ31590.1  18 AAVNCEKE---------SNRHFCDQAGIRGFPTlNIVKPGKtagkPIVQEYNGARSAKEIV 69 
                    44555554.........569999**********656888889**99**********99986 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.013
  Thioredoxin_2  66 ieenvelarkygvrgtPtiv.fldgk.eivarl 96 
                     ++n++  +ky+++ +Pti  +  g+  +++r+
     KHJ31590.1 133 SKDNKDIEKKYEIKKLPTIMlVKRGEtDEFLRY 165
                    5678889999********883444546666666 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.066     3e+02      63      91 ..      19      47 ..       4      50 .. 0.83
   2 ?    7.8   0.0   0.00094       4.2      67      91 ..     132     156 ..     121     159 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.066
                   E.EE-TT-HHHHTT-S--TT-SEEEEE-T CS
  Thioredoxin_8 63 svpfddkkrnklkkkynvkaiPtlvvldk 91
                   +v  +++++ +++++ ++ ++Ptl ++++
     KHJ31590.1 19 AVNCEKESNRHFCDQAGIRGFPTLNIVKP 47
                   5666777899**************99987 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00094
                    -TT-HHHHTT-S--TT-SEEEEE-T CS
  Thioredoxin_8  67 ddkkrnklkkkynvkaiPtlvvldk 91 
                     +k+++ + kky++k++Pt++++++
     KHJ31590.1 132 VSKDNKDIEKKYEIKKLPTIMLVKR 156
                    467899***************9975 PP

>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  30.9     0.001       4.6     589     704 ..     379     488 ..     319     494 .. 0.46

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.001
        Hid1 589 sarldsideeeeenssessrieesrsesrspslsevpelksslaitddeskaereksatessssqavsqlremsekarakesaesteesrqesatskks 687
                 ++++++++++ee++sse+++++e++++s++     ++++k++l+++++ s+++++ +++ess+++  + ++e ++ +++++s+e+++++++es+++k+s
  KHJ31590.1 379 KKSSEDKESSEEKESSEEKESSEKKESSEEK----ESSEKKELSEEKESSEENESSEENESSEKK--ESSEENESLEENESSEEKESSEKKESSEEKES 471
                 2222222222222222222222222222222....222222222222222222222222211111..11222223333333333333333444444444 PP

        Hid1 688 psgmsqsaeekftptse 704
                  ++ s+s+++kf +++ 
  KHJ31590.1 472 SEEESSSKRGKFSNEET 488
                 44455555666655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (504 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2752  (0.153494); expected 358.6 (0.02)
Passed bias filter:                      865  (0.0482459); expected 358.6 (0.02)
Passed Vit filter:                       448  (0.0249875); expected 17.9 (0.001)
Passed Fwd filter:                       135  (0.0075297); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.65u 0.37s 00:00:02.02 Elapsed: 00:00:00.58
# Mc/sec: 2611.30
//
Query:       KHJ31591.1  [L=418]
Description: hypothetical protein EV44_g0805 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.3e-54  181.3   1.2    9.3e-54  181.3   1.2    1.6  2  Vta1      Vta1 like
    1.1e-17   63.5   0.3    1.1e-17   63.5   0.3    2.1  2  Vta1_C    Vta1 C-terminal domain


Domain annotation for each model (and alignments):
>> Vta1  Vta1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.3   1.2     1e-57   9.3e-54       2     144 ..      15     157 ..      14     158 .. 0.98
   2 ?   -2.8   0.0      0.61   5.5e+03     123     137 ..     380     394 ..     364     397 .. 0.74

  Alignments for each domain:
  == domain 1  score: 181.3 bits;  conditional E-value: 1e-57
        Vta1   2 iapflkrakelekadpvvaYycrlyaveqilkkklkrkdkeakefltkLldklEqlKkelkendaiedeeaakayvenfalklfnkadkedragkatka 100
                 +++f++ra +le+ +pv+aY+c++++v+qil+k+l++ d+e+ ef+tkL+dklEq+K+e+ e dai d++a++ yv++f+l++f++a+k++ra+katk+
  KHJ31591.1  15 LTRFINRATQLENIKPVIAYWCEYWIVNQILTKGLHNGDPETLEFTTKLIDKLEQIKAENPEVDAILDDKAGQIYVLQFTLEIFQRAEKALRANKATKQ 113
                 799************************************************************************************************ PP

        Vta1 101 taktflaaatlfevlklfgeldeeikkkikyakwkaarilkalk 144
                 ta+tf+aaat+fe+++++++++ +i +kiky kw+a+ril+a+ 
  KHJ31591.1 114 TASTFQAAATFFELINIWTTPEHDILAKIKYSKWNAVRILRAIS 157
                 *****************************************996 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.61
        Vta1 123 eeikkkikyakwkaa 137
                  +i+k +k+a+w ++
  KHJ31591.1 380 ISIAKAQKHARWAIS 394
                 467899999999876 PP

>> Vta1_C  Vta1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.2      0.16   1.5e+03       6      16 ..     106     116 ..      97     119 .. 0.79
   2 !   63.5   0.3   1.2e-21   1.1e-17       3      38 .]     381     416 ..     380     416 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.16
      Vta1_C   6 eAqKhaKfAiS 16 
                 +A K++K+++S
  KHJ31591.1 106 RANKATKQTAS 116
                 68899999888 PP

  == domain 2  score: 63.5 bits;  conditional E-value: 1.2e-21
      Vta1_C   3 qiaeAqKhaKfAiSALqYeDvetAiknLqeALklLt 38 
                 +ia+AqKha++AiSAL++eD etAik+L+eALk+L+
  KHJ31591.1 381 SIAKAQKHARWAISALNFEDTETAIKELKEALKTLG 416
                 589******************************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (418 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       843  (0.0470188); expected 358.6 (0.02)
Passed bias filter:                      563  (0.0314016); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3069.81
//
Query:       KHJ31592.1  [L=103]
Description: hypothetical protein EV44_g4744 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       423  (0.0235931); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 832.59
//
Query:       KHJ31593.1  [L=486]
Description: putative fungal duf1750 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   2.9e-213  710.5   2.9   3.5e-213  710.3   2.9    1.0  1  SWI-SNF_Ssr4  Fungal domain of unknown function (DUF1750)


Domain annotation for each model (and alignments):
>> SWI-SNF_Ssr4  Fungal domain of unknown function (DUF1750)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  710.3   2.9    2e-217  3.5e-213       1     471 [.       2     468 ..       2     477 .. 0.96

  Alignments for each domain:
  == domain 1  score: 710.3 bits;  conditional E-value: 2e-217
  SWI-SNF_Ssr4   1 qdPsqgvpqqLlpHvHlvSsyrypalarlelekvveyLlaApkiardkaPfvWtyLdrPqDgtvlltWQplkrlgtnfasDGyvWadaEqayklevg 97 
                   +dPsqg++++LlpH+HlvS+yr+p+l+++++ekv+e+LlaApki+r++aPf+WtyLdrPqD+t++l+WQ+++ lg +f+sDGy+W+++E+a k++v+
    KHJ31593.1   2 NDPSQGIQRELLPHIHLVSTYRFPQLPQIHPEKVAEWLLAAPKISREQAPFYWTYLDRPQDMTIFLVWQTMA-LGVEFPSDGYIWTPQETALKFQVQ 97 
                   69*********************************************************************9.************************ PP

  SWI-SNF_Ssr4  98 nGltlEiylqkaGyapgeqvalhaRrRyRlvpskvpnpnapqpDpsLwivhYskaepedripanripvdervqkilaqrrfLqsqGqlarKeFmLhD 194
                   +G+tlE+y++k+Gyapge++a+h+RrRyRl+p++vp  ++ qpDpsLwivhY++aep++rip n ip+d+rvq+i+++r++LqsqGq+++K+FmLhD
    KHJ31593.1  98 SGYTLEMYHHKVGYAPGEPLATHSRRRYRLLPPQVPGIQTVQPDPSLWIVHYTTAEPSERIPPNIIPIDMRVQQIMNTRQYLQSQGQIVQKDFMLHD 194
                   ************************************************************************************************* PP

  SWI-SNF_Ssr4 195 ranwptiefprkqpq...ayaaqmaprrvPqqmayppqqgqvgppakraarasaaqaaaaaaaeadleledeedvsrgDllDhlTPReiskaRYqqn 288
                   ra+wpti+fpr+ pq     +++++ +r+Pq++ayp+q + ++ p+kr ++++++    a      +e++++ed+srgD +Dh+TPReis++RY+qn
    KHJ31593.1 195 RAQWPTIAFPRNGPQgaaLNEQKIPLTRIPQTIAYPTQSPIATHPSKRIRTQPNTPGGIA-----VFEIDEQEDTSRGDYFDHITPREISMMRYKQN 286
                   ***********9888774455566669***********9999999999888876665555.....789***************************** PP

  SWI-SNF_Ssr4 289 hewmeEilsSpyaisqivpvdLgLGlkGeLasLTeGifeaqleeakketpkkkyvgkldpekaeeFrkrvaekveetkaeieklkaeHakrlaklkk 385
                   hewmeE++sSpy++++i+p+dLgLG++GeLasLT+Gif+a+l+ +++ +  ++yvg+ldpekaeeFrkrv+ k+++t+ eieklk++H krl++ +k
    KHJ31593.1 287 HEWMEEVISSPYSMNRIIPTDLGLGVRGELASLTNGIFDAPLDPDRDIS-YHNYVGRLDPEKAEEFRKRVNAKIAQTNIEIEKLKEKHLKRLKRGQK 382
                   *******************************************999998.89********************************************* PP

  SWI-SNF_Ssr4 386 ssllkqaEkeLreavadpsetgseiwrlegrldeeeeeeseasveakkkvddivaeveaslgrkivavkevkrvqdGGlqekveep 471
                   +s++++aEkeL +av++ps++gse+wrleg ++e+e+e+ +a+ +   kv+di+a+veas++ ++++vke+ r+q+GGl+e+   p
    KHJ31593.1 383 GSIFRTAEKELCQAVNNPSDMGSEVWRLEGYIEENESERVKAPLSVPPKVSDILAKVEASIECHAEPVKELLRIQEGGLEESHLIP 468
                   *********************************************************************************86554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 3708.75
//
Query:       KHJ31594.1  [L=146]
Description: putative 40s ribosomal protein s17 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.9e-60  200.1   0.2    9.2e-60  199.9   0.2    1.1  1  Ribosomal_S17e  Ribosomal S17


Domain annotation for each model (and alignments):
>> Ribosomal_S17e  Ribosomal S17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.9   0.2   5.1e-64   9.2e-60       1     116 [.       1     121 [.       1     129 [. 0.93

  Alignments for each domain:
  == domain 1  score: 199.9 bits;  conditional E-value: 5.1e-64
                     XX----HHHHHHHHHHHHS-TTT--S-HHHHHHHHHHHS----SHHHHHHHHHHHHHHHHTTSS--SS---HHHHHHHHHHH------------- CS
  Ribosomal_S17e   1 mgrvrtktvKkaarviiekyyskltndFhtnkkvceevaiipskklrnkiaGyvthlmkriqkgpvrgislklqeeererrdnyvpevsaldqea 95 
                     mgrvrtktvK++a+viie+yy+klt+dF+tnk++c+e+aii+sk+lrnkiaGy+thlmkriq+gpvrgis+klqeeerer+d yvpevsald ++
      KHJ31594.1   1 MGRVRTKTVKRSAKVIIERYYPKLTLDFETNKRICDEIAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDLYVPEVSALDFSQ 95 
                     9******************************************************************************************5444 PP

                     .....----HHHHHHHHHH-X.XXXX CS
  Ribosomal_S17e  96 .....ievdkdtkemlkslgfeslsn 116
                          +evd++tk++lkslgf+s++ 
      KHJ31594.1  96 tesgqLEVDSETKDLLKSLGFDSIPV 121
                     34466*****************9984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1101.69
//
Query:       KHJ31595.1  [L=566]
Description: putative msc1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-86  283.0  34.9    1.5e-17   63.6   0.5    8.7  8  Ish1             Putative stress-responsive nuclear envelope 
    8.3e-15   54.2   0.9      0.085   12.6   0.0    6.5  7  HeH              HeH/LEM domain
    5.2e-10   38.8   0.0       0.86    9.4   0.0    7.0  7  SAP              SAP domain
    4.1e-06   26.6   0.3        2.8    8.0   0.0    6.1  6  Slx4             Slx4 endonuclease
    0.00023   21.3   0.0         28    5.0   0.0    4.9  5  Endonuc-dimeris  T4 recombination endonuclease VII, dimerisat
    0.00032   20.2   0.0        4.1    7.0   0.0    4.9  6  LEM              LEM domain
     0.0013   19.1   0.6       0.17   12.3   0.2    3.9  3  HA               Helicase associated domain
     0.0029   16.8   5.1       0.15   11.2   0.4    3.7  4  DUF4518          Domain of unknown function (DUF4518)
     0.0038   17.1   0.3         14    5.6   0.0    4.2  4  CPSase_sm_chain  Carbamoyl-phosphate synthase small chain, CP
     0.0057   16.2   0.0         11    5.7   0.0    4.4  5  Thymopoietin     Thymopoietin protein
  ------ inclusion threshold ------
       0.02   15.0   1.8        2.2    8.5   0.1    4.3  4  SAM_2            SAM domain (Sterile alpha motif)
      0.053   13.4   0.0         21    5.1   0.0    4.2  5  DUF4224          Domain of unknown function (DUF4224)
        1.7    8.5   7.1        6.4    6.6   0.0    4.1  5  Apolipoprotein   Apolipoprotein A1/A4/E domain
        2.7    7.7   6.5          5    6.8   2.1    2.7  2  DUF445           Protein of unknown function (DUF445)
        8.7    6.7  16.0         15    5.9   0.6    4.1  4  Grg1             Glucose-repressible protein Grg1


Domain annotation for each model (and alignments):
>> Ish1  Putative stress-responsive nuclear envelope protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   1.1   7.2e-09   8.6e-06       1      37 []      28      63 ..      28      63 .. 0.94
   2 !   18.1   0.3   2.1e-06    0.0025       3      36 ..      74     108 ..      72     109 .. 0.93
   3 !   33.9   0.0   2.4e-11   2.8e-08       1      37 []     129     166 ..     129     166 .. 0.93
   4 !   63.6   0.5   1.2e-20   1.5e-17       1      37 []     186     221 ..     186     221 .. 0.97
   5 !   34.1   0.3     2e-11   2.4e-08       2      37 .]     253     287 ..     252     287 .. 0.97
   6 !   44.8   0.0   9.5e-15   1.1e-11       3      37 .]     343     376 ..     343     376 .. 0.97
   7 !   35.7   0.1   6.6e-12   7.9e-09       1      36 [.     389     429 ..     389     429 .. 0.87
   8 !   47.9   0.1     1e-15   1.2e-12       1      36 [.     461     495 ..     461     496 .. 0.96

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 7.2e-09
        Ish1  1 FdtWSdsdLkkWLdshGipvskaastRdeLlklardn 37
                ++ W + +L  WL++h+ip  ++ ++R +L k  ++n
  KHJ31595.1 28 YNKWHETELERWLSDHNIP-YPSSADRKDLEKIISEN 63
                89*****************.7*********9998877 PP

  == domain 2  score: 18.1 bits;  conditional E-value: 2.1e-06
        Ish1   3 tWSdsdLkkWLdshGip.vskaastRdeLlklard 36 
                 +W+ ++L ++L++ G+  +++ a ++d L+  +++
  KHJ31595.1  74 DWDVNQLSSYLKEKGVEiKDSTAESKDGLISRVKN 108
                 6****************9989999*******9995 PP

  == domain 3  score: 33.9 bits;  conditional E-value: 2.4e-11
        Ish1   1 FdtWSdsdLkkWLdshGipvskaas..tRdeLlklardn 37 
                 Fd WSds Lk++ d+hGipv +++   +R+  l+++r+n
  KHJ31595.1 129 FDGWSDSALKAFADKHGIPV-PQTQtqKRETVLQALRSN 166
                 9******************8.777779*********998 PP

  == domain 4  score: 63.6 bits;  conditional E-value: 1.2e-20
        Ish1   1 FdtWSdsdLkkWLdshGipvskaastRdeLlklardn 37 
                 +d+WSdsdLk+WLdshGip+ +++stRd+L++ +r+n
  KHJ31595.1 186 YDSWSDSDLKEWLDSHGIPA-PQTSTRDKLIASVRRN 221
                 9******************5.**************98 PP

  == domain 5  score: 34.1 bits;  conditional E-value: 2e-11
        Ish1   2 dtWSdsdLkkWLdshGipvskaastRdeLlklardn 37 
                 ++WSds Lk+ Ld++G+ v +++s+ +eLl+lar++
  KHJ31595.1 253 ESWSDSKLKEILDKNGVNV-PQGSKTSELLALARKY 287
                 79****************8.**************98 PP

  == domain 6  score: 44.8 bits;  conditional E-value: 9.5e-15
        Ish1   3 tWSdsdLkkWLdshGipvskaastRdeLlklardn 37 
                 tWSds+Lk++Lds G+pv +++ +Rde+l+++r n
  KHJ31595.1 343 TWSDSRLKAYLDSRGVPV-PQGGKRDEILAAVRLN 376
                 9****************8.*************976 PP

  == domain 7  score: 35.7 bits;  conditional E-value: 6.6e-12
        Ish1   1 FdtWSdsdLkkWLdshGipvskaas........tRdeLlklard 36 
                 FdtWS+++Lkk+L+s G ++s            +Rd+Ll +a+d
  KHJ31595.1 389 FDTWSTENLKKFLASSGNKAS---EqigntvgaSRDQLLSAAQD 429
                 9****************6643...24458*************97 PP

  == domain 8  score: 47.9 bits;  conditional E-value: 1e-15
        Ish1   1 FdtWSdsdLkkWLdshGipvskaastRdeLlklard 36 
                 FdtWS+s+Lk++Lds+G+pv +++s+++ L++ ar+
  KHJ31595.1 461 FDTWSESELKNYLDSYGVPV-PQGSKKNALIAWARN 495
                 9******************8.***********9995 PP

>> HeH  HeH/LEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   0.00012      0.14       8      24 ..      35      51 ..      34      54 .. 0.91
   2 ?   -0.1   0.0      0.65   7.7e+02       6      20 ..      77      91 ..      77      95 .. 0.89
   3 ?   -2.5   0.0       3.7   4.4e+03      15      21 ..     143     149 ..     142     151 .. 0.83
   4 !    7.8   0.0    0.0023       2.7       7      23 ..     192     208 ..     192     216 .. 0.87
   5 !   11.1   0.1   0.00021      0.25       8      32 ..     259     283 ..     258     286 .. 0.88
   6 ?    1.7   0.0      0.17   2.1e+02       8      25 ..     348     365 ..     347     370 .. 0.88
   7 !   12.6   0.0   7.1e-05     0.085       7      31 ..     467     491 ..     467     492 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00012
         HeH  8 qLRriLvehgveyPsna 24
                +L r+L  h+++yPs+a
  KHJ31595.1 35 ELERWLSDHNIPYPSSA 51
                5779***********98 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.65
         HeH  6 VaqLRriLvehgvey 20
                V qL + L e+gve+
  KHJ31595.1 77 VNQLSSYLKEKGVEI 91
                7899999******98 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 3.7
         HeH  15 ehgveyP 21 
                 +hg+++P
  KHJ31595.1 143 KHGIPVP 149
                 8****99 PP

  == domain 4  score: 7.8 bits;  conditional E-value: 0.0023
         HeH   7 aqLRriLvehgveyPsn 23 
                 ++L+++L +hg++ P +
  KHJ31595.1 192 SDLKEWLDSHGIPAPQT 208
                 59**********98865 PP

  == domain 5  score: 11.1 bits;  conditional E-value: 0.00021
         HeH   8 qLRriLvehgveyPsnaKKadLveL 32 
                 +L++iL ++gv +P  +K ++L++L
  KHJ31595.1 259 KLKEILDKNGVNVPQGSKTSELLAL 283
                 8*************99998888776 PP

  == domain 6  score: 1.7 bits;  conditional E-value: 0.17
         HeH   8 qLRriLvehgveyPsnaK 25 
                 +L++ L + gv++P   K
  KHJ31595.1 348 RLKAYLDSRGVPVPQGGK 365
                 8************97665 PP

  == domain 7  score: 12.6 bits;  conditional E-value: 7.1e-05
         HeH   7 aqLRriLvehgveyPsnaKKadLve 31 
                 ++L+  L ++gv++P  +KK  L++
  KHJ31595.1 467 SELKNYLDSYGVPVPQGSKKNALIA 491
                 58*********************96 PP

>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.92   1.1e+03       3      18 ..      74      89 ..      72      92 .. 0.80
   2 ?    2.9   0.0      0.08        96       2      20 ..     130     148 ..     129     148 .. 0.89
   3 !    9.4   0.0   0.00072      0.86       1      19 [.     186     204 ..     186     205 .. 0.94
   4 ?    5.4   0.0     0.013        15       1      18 [.     252     269 ..     252     271 .. 0.89
   5 !    6.0   0.0    0.0083       9.9       2      20 ..     342     360 ..     341     374 .. 0.85
   6 ?   -1.6   0.0       2.1   2.5e+03      18      25 ..     401     408 ..     401     409 .. 0.88
   7 ?    4.8   0.0     0.021        25       2      20 ..     462     480 ..     461     490 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.92
                T--HHHHHHHHHHTT- CS
         SAP  3 kltVaeLKeeLkkrGL 18
                 + V++L ++Lk+ G 
  KHJ31595.1 74 DWDVNQLSSYLKEKGV 89
                56699*******9986 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.08
                 TT--HHHHHHHHHHTT--T CS
         SAP   2 skltVaeLKeeLkkrGLpt 20 
                   ++ + LK++  k+G+p+
  KHJ31595.1 130 DGWSDSALKAFADKHGIPV 148
                 579999***********96 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00072
                 HTT--HHHHHHHHHHTT-- CS
         SAP   1 lskltVaeLKeeLkkrGLp 19 
                 + +++ ++LKe L ++G+p
  KHJ31595.1 186 YDSWSDSDLKEWLDSHGIP 204
                 789***************9 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.013
                 HTT--HHHHHHHHHHTT- CS
         SAP   1 lskltVaeLKeeLkkrGL 18 
                 l++++ ++LKe+L k+G 
  KHJ31595.1 252 LESWSDSKLKEILDKNGV 269
                 689************996 PP

  == domain 5  score: 6.0 bits;  conditional E-value: 0.0083
                 TT--HHHHHHHHHHTT--T CS
         SAP   2 skltVaeLKeeLkkrGLpt 20 
                  +++ + LK++L +rG p+
  KHJ31595.1 342 GTWSDSRLKAYLDSRGVPV 360
                 57999***********985 PP

  == domain 6  score: -1.6 bits;  conditional E-value: 2.1
                 --TTS-HH CS
         SAP  18 LptsGkKa 25 
                 L++sG+Ka
  KHJ31595.1 401 LASSGNKA 408
                 789****9 PP

  == domain 7  score: 4.8 bits;  conditional E-value: 0.021
                 TT--HHHHHHHHHHTT--T CS
         SAP   2 skltVaeLKeeLkkrGLpt 20 
                  +++ +eLK +L ++G p+
  KHJ31595.1 462 DTWSESELKNYLDSYGVPV 480
                 67999***********986 PP

>> Slx4  Slx4 endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       2.5     3e+03      42      56 ..      74      88 ..      33      91 .. 0.44
   2 ?    1.2   0.0      0.31   3.7e+02      43      57 ..     132     146 ..      76     148 .. 0.77
   3 !    8.0   0.0    0.0023       2.8      42      57 ..     188     203 ..     160     204 .. 0.85
   4 ?    2.0   0.0      0.17     2e+02      39      57 ..     251     269 ..     234     271 .. 0.81
   5 ?    3.6   0.0     0.055        66      41      57 ..     339     358 ..     326     360 .. 0.74
   6 ?    2.7   0.0       0.1   1.2e+02      40      57 ..     461     478 ..     443     480 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.5
                GS-HHHHHHHHHHHT CS
        Slx4 42 evdpaelrewcdskg 56
                 +d ++l  ++ +kg
  KHJ31595.1 74 DWDVNQLSSYLKEKG 88
                445555555555555 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.31
                 S-HHHHHHHHHHHT- CS
        Slx4  43 vdpaelrewcdskgI 57 
                 ++++ l++++d++gI
  KHJ31595.1 132 WSDSALKAFADKHGI 146
                 567889999999998 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0023
                 GS-HHHHHHHHHHHT- CS
        Slx4  42 evdpaelrewcdskgI 57 
                  +++++l+ew+ds+gI
  KHJ31595.1 188 SWSDSDLKEWLDSHGI 203
                 57899**********9 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.17
                 GGGGS-HHHHHHHHHHHT- CS
        Slx4  39 glkevdpaelrewcdskgI 57 
                  l+ +++++l+e +d++g+
  KHJ31595.1 251 ILESWSDSKLKEILDKNGV 269
                 3568899***********9 PP

  == domain 5  score: 3.6 bits;  conditional E-value: 0.055
                 G...GS-HHHHHHHHHHHT- CS
        Slx4  41 k...evdpaelrewcdskgI 57 
                 +    ++++ l++++ds+g+
  KHJ31595.1 339 TaigTWSDSRLKAYLDSRGV 358
                 255578899**********9 PP

  == domain 6  score: 2.7 bits;  conditional E-value: 0.1
                 GGGS-HHHHHHHHHHHT- CS
        Slx4  40 lkevdpaelrewcdskgI 57 
                 ++ ++++el++++ds g+
  KHJ31595.1 461 FDTWSESELKNYLDSYGV 478
                 447899*********998 PP

>> Endonuc-dimeris  T4 recombination endonuclease VII, dimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.12   1.4e+02      25      44 ..      40      59 ..      30      63 .. 0.83
   2 ?    5.0   0.0     0.023        28      21      48 ..     194     221 ..     190     228 .. 0.89
   3 ?    1.7   0.0      0.25     3e+02      21      47 ..     260     286 ..     254     293 .. 0.87
   4 ?   -1.5   0.0       2.4   2.9e+03      22      39 ..     350     367 ..     347     374 .. 0.75
   5 ?    4.5   0.0     0.032        38      17      46 ..     465     494 ..     454     498 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.12
                     HHHTT----TTS-HHHHHHH CS
  Endonuc-dimeris 25 llslGikYnesdkKsdLiki 44
                     l    i Y+ s+ + dL+ki
       KHJ31595.1 40 LSDHNIPYPSSADRKDLEKI 59
                     5566799***********98 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.023
                      HHHHHHHTT----TTS-HHHHHHHHHHH CS
  Endonuc-dimeris  21 qkeellslGikYnesdkKsdLikiykKs 48 
                       ke l+s Gi  ++  ++  Li++ +++
       KHJ31595.1 194 LKEWLDSHGIPAPQTSTRDKLIASVRRN 221
                      6899********************9875 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.25
                      HHHHHHHTT----TTS-HHHHHHHHHH CS
  Endonuc-dimeris  21 qkeellslGikYnesdkKsdLikiykK 47 
                       ke l++ G++ ++  k s+L +  +K
       KHJ31595.1 260 LKEILDKNGVNVPQGSKTSELLALARK 286
                      58899****************998777 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 2.4
                      HHHHHHTT----TTS-HH CS
  Endonuc-dimeris  22 keellslGikYnesdkKs 39 
                      k+ l+s+G+  ++  k+ 
       KHJ31595.1 350 KAYLDSRGVPVPQGGKRD 367
                      789*****9888776665 PP

  == domain 5  score: 4.5 bits;  conditional E-value: 0.032
                      -HHHHHHHHHHTT----TTS-HHHHHHHHH CS
  Endonuc-dimeris  17 kkeEqkeellslGikYnesdkKsdLikiyk 46 
                         E k+ l+s G+  ++  kK  Li+  +
       KHJ31595.1 465 SESELKNYLDSYGVPVPQGSKKNALIAWAR 494
                      56799*********************9665 PP

>> LEM  LEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       4.8   5.8e+03      28      34 ..      24      30 ..      24      30 .. 0.91
   2 ?   -3.1   0.0       5.2   6.2e+03       6      21 ..     133     148 ..     130     148 .. 0.80
   3 !    7.0   0.0    0.0034       4.1       3      21 ..     187     205 ..     186     211 .. 0.89
   4 ?    1.8   0.0      0.15   1.8e+02       4      21 ..     254     271 ..     252     271 .. 0.87
   5 ?    0.1   0.0      0.51   6.1e+02       6      21 ..     345     360 ..     342     360 .. 0.92
   6 ?    3.4   0.0     0.047        57       6      21 ..     465     480 ..     461     480 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4.8
         LEM 28 TRklYek 34
                TR +Y k
  KHJ31595.1 24 TRAVYNK 30
                9****87 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 5.2
         LEM   6 sDeeLreeLkkyGvsp 21 
                 sD+ L++   k+G+++
  KHJ31595.1 133 SDSALKAFADKHGIPV 148
                 8999998888899875 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0034
         LEM   3 asLsDeeLreeLkkyGvsp 21 
                 +s sD++L+e L ++G+++
  KHJ31595.1 187 DSWSDSDLKEWLDSHGIPA 205
                 667*************985 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.15
         LEM   4 sLsDeeLreeLkkyGvsp 21 
                 s sD+ L+e L k Gv++
  KHJ31595.1 254 SWSDSKLKEILDKNGVNV 271
                 569***********9986 PP

  == domain 5  score: 0.1 bits;  conditional E-value: 0.51
         LEM   6 sDeeLreeLkkyGvsp 21 
                 sD+ L++ L + Gv++
  KHJ31595.1 345 SDSRLKAYLDSRGVPV 360
                 9************986 PP

  == domain 6  score: 3.4 bits;  conditional E-value: 0.047
         LEM   6 sDeeLreeLkkyGvsp 21 
                 s +eL++ L +yGv++
  KHJ31595.1 465 SESELKNYLDSYGVPV 480
                 889**********986 PP

>> HA  Helicase associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       8.7     1e+04      31      45 ..      33      47 ..      27      59 .. 0.59
   2 ?    1.9   0.0      0.24   2.9e+02      11      26 ..     136     154 ..     135     180 .. 0.71
   3 !   12.3   0.2   0.00014      0.17      11      51 ..     468     506 ..     459     528 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 8.7
          HA 31 npsLgkWvakqRqqy 45
                +  L +W+++    y
  KHJ31595.1 33 ETELERWLSDHNIPY 47
                556778887665555 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.24
          HA  11 eLkeykaehGhlnvP....e 26 
                 +Lk+++++hG   vP    +
  KHJ31595.1 136 ALKAFADKHG-IPVPqtqtQ 154
                 89********.666654320 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 0.00014
          HA  11 eLkeykaehGhlnvP.ekteenpsLgkWvakqRqqykkgklt 51 
                 eLk y + +G   vP ++ +++ +L +W  +qR+ ++ g+ t
  KHJ31595.1 468 ELKNYLDSYG---VPvPQGSKKNALIAWARNQRNYFQYGTTT 506
                 99********...6665778899***********99887755 PP

>> DUF4518  Domain of unknown function (DUF4518)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.86     1e+03      68     101 ..      38      70 ..      30      82 .. 0.80
   2 !   11.2   0.4   0.00013      0.15      67      97 ..      81     125 ..      76     195 .. 0.66
   3 ?    1.0   0.1      0.16   1.9e+02      68     117 ..     196     245 ..     190     289 .. 0.67
   4 ?    4.2   0.0     0.018        21      68      93 ..     471     496 ..     466     562 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.86
     DUF4518  68 kYLaskgvsvppdseKadLiervlelwksesqse 101
                 ++L+ +++  p +++ +dL + + e w+s + ++
  KHJ31595.1  38 RWLSDHNIPYPSSADRKDLEKIISENWDS-KINQ 70 
                 689999*********************99.3333 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00013
     DUF4518  67 FkYLaskgvsv..ppdseKadLiervlelwks............e 97 
                  +YL++kgv +  +++ +K+ Li+rv+++w++            +
  KHJ31595.1  81 SSYLKEKGVEIkdSTAESKDGLISRVKNIWSEkvdqsenswsdiK 125
                 57******9993346779**************5544444444440 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.16
     DUF4518  68 kYLaskgvsvppdseKadLiervlelwksesqseeaskkeatssksqqen 117
                 ++L s+g+  p +s+ ++Li  v    +  s + ++++ +at+s  + ++
  KHJ31595.1 196 EWLDSHGIPAPQTSTRDKLIASVRRNSRIASLKARNAQASATKSAASVSE 245
                 5899999*************999988887333333333333333333333 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.018
     DUF4518  68 kYLaskgvsvppdseKadLiervlel 93 
                 +YL s+gv vp  s+K+ Li  + + 
  KHJ31595.1 471 NYLDSYGVPVPQGSKKNALIAWARNQ 496
                 7*******************866554 PP

>> CPSase_sm_chain  Carbamoyl-phosphate synthase small chain, CPSase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.011        14      85     121 ..      28      63 ..      20      70 .. 0.85
   2 ?    2.4   0.0      0.11   1.3e+02      90     121 ..     190     221 ..     178     227 .. 0.77
   3 ?    3.4   0.0     0.053        63      65     121 ..     231     287 ..     222     291 .. 0.83
   4 ?   -1.9   0.0       2.3   2.8e+03      89     116 ..     464     491 ..     451     498 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.011
  CPSase_sm_chain  85 psnwraeesLsewlkeekipgisgvDTRaLtkklrek 121
                      +++w+ e++L++wl++++ip  s  D + L k + e+
       KHJ31595.1  28 YNKWH-ETELERWLSDHNIPYPSSADRKDLEKIISEN 63 
                      45555.899*******************999999775 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.11
  CPSase_sm_chain  90 aeesLsewlkeekipgisgvDTR.aLtkklrek 121
                      ++++L+ewl +++ip+ +   TR +L+  +r++
       KHJ31595.1 190 SDSDLKEWLDSHGIPAPQTS-TRdKLIASVRRN 221
                      4789***********97654.442688888776 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.053
  CPSase_sm_chain  65 dvesekikvaglvvrelseepsnwraeesLsewlkeekipgisgvDTRaLtkklrek 121
                      + +++ +k a+ v ++ls++  +  ++++L+e+l ++++ + +g  T +L    r+ 
       KHJ31595.1 231 NAQASATKSAASVSETLSDKILESWSDSKLKEILDKNGVNVPQGSKTSELLALARKY 287
                      55667788899999999999999899**************99999999998887765 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 2.3
  CPSase_sm_chain  89 raeesLsewlkeekipgisgvDTRaLtk 116
                       +e++L+++l ++++p+ +g    aL+ 
       KHJ31595.1 464 WSESELKNYLDSYGVPVPQGSKKNALIA 491
                      45899********999877766666655 PP

>> Thymopoietin  Thymopoietin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.19   2.2e+02      19      34 ..      40      55 ..      35      56 .. 0.89
   2 ?   -3.6   0.0       7.7   9.2e+03      14      30 ..     193     209 ..     190     211 .. 0.78
   3 ?    1.2   0.0      0.23   2.7e+02      11      32 ..     256     277 ..     254     280 .. 0.88
   4 !    5.7   0.0    0.0093        11      11      34 ..     345     368 ..     342     380 .. 0.90
   5 ?    0.5   0.0      0.39   4.6e+02      11      32 ..     465     486 ..     462     489 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.19
  Thymopoietin 19 LvahnVaLPpgesrKd 34
                  L  hn++ P+   rKd
    KHJ31595.1 40 LSDHNIPYPSSADRKD 55
                  678************9 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 7.7
  Thymopoietin  14 rLKSeLvahnVaLPpge 30 
                    LK  L +h ++ P+  
    KHJ31595.1 193 DLKEWLDSHGIPAPQTS 209
                   58888999999999865 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.23
  Thymopoietin  11 tKdrLKSeLvahnVaLPpgesr 32 
                   + ++LK  L  + V+ P+g ++
    KHJ31595.1 256 SDSKLKEILDKNGVNVPQGSKT 277
                   6689***************876 PP

  == domain 4  score: 5.7 bits;  conditional E-value: 0.0093
  Thymopoietin  11 tKdrLKSeLvahnVaLPpgesrKd 34 
                   + +rLK+ L +  V+ P+g +r +
    KHJ31595.1 345 SDSRLKAYLDSRGVPVPQGGKRDE 368
                   679****************99976 PP

  == domain 5  score: 0.5 bits;  conditional E-value: 0.39
  Thymopoietin  11 tKdrLKSeLvahnVaLPpgesr 32 
                   + + LK+ L +  V+ P+g ++
    KHJ31595.1 465 SESELKNYLDSYGVPVPQGSKK 486
                   66889**************876 PP

>> SAM_2  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1    0.0018       2.2       1      18 [.     186     203 ..     186     208 .. 0.90
   2 ?   -0.1   0.0      0.84     1e+03       3      18 ..     343     358 ..     341     373 .. 0.90
   3 ?    1.6   0.0      0.25   2.9e+02       2      17 ..     390     405 ..     389     412 .. 0.85
   4 ?   -1.2   0.0         2   2.4e+03       2      18 ..     462     478 ..     461     480 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0018
                 GGGHHHHHHHHHHHHTTT CS
       SAM_2   1 veswsledvaeWLrsigl 18 
                 ++sws +d+ eWL+s+g 
  KHJ31595.1 186 YDSWSDSDLKEWLDSHGI 203
                 689************985 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.84
                 GHHHHHHHHHHHHTTT CS
       SAM_2   3 swsledvaeWLrsigl 18 
                 +ws +++  +L+s g 
  KHJ31595.1 343 TWSDSRLKAYLDSRGV 358
                 79*********99886 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.25
                 GGHHHHHHHHHHHHTT CS
       SAM_2   2 eswsledvaeWLrsig 17 
                 ++ws+e++ ++L s g
  KHJ31595.1 390 DTWSTENLKKFLASSG 405
                 79**********9866 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 2
                 GGHHHHHHHHHHHHTTT CS
       SAM_2   2 eswsledvaeWLrsigl 18 
                 ++ws +++ ++L+s g 
  KHJ31595.1 462 DTWSESELKNYLDSYGV 478
                 79**********99775 PP

>> DUF4224  Domain of unknown function (DUF4224)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.14   1.6e+02      21      35 ..      38      52 ..      33      54 .. 0.89
   2 ?    5.1   0.0     0.017        21      21      32 ..     196     207 ..     192     215 .. 0.85
   3 ?   -3.1   0.0       6.4   7.7e+03      19      32 ..     260     273 ..     258     275 .. 0.77
   4 ?   -2.6   0.0       4.5   5.4e+03      20      32 ..     350     362 ..     346     364 .. 0.78
   5 ?   -1.3   0.0       1.8   2.2e+03      22      43 ..     472     493 ..     466     494 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.14
     DUF4224 21 kwLranGipfvvrad 35
                +wL  + ip++  ad
  KHJ31595.1 38 RWLSDHNIPYPSSAD 52
                8*********98887 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.017
     DUF4224  21 kwLranGipfvv 32 
                 +wL+++Gip ++
  KHJ31595.1 196 EWLDSHGIPAPQ 207
                 8********876 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 6.4
     DUF4224  19 QakwLranGipfvv 32 
                   ++L++nG+ +++
  KHJ31595.1 260 LKEILDKNGVNVPQ 273
                 5689*****98765 PP

  == domain 4  score: -2.6 bits;  conditional E-value: 4.5
     DUF4224  20 akwLranGipfvv 32 
                  + L+++G+p+++
  KHJ31595.1 350 KAYLDSRGVPVPQ 362
                 56799****9976 PP

  == domain 5  score: -1.3 bits;  conditional E-value: 1.8
     DUF4224  22 wLranGipfvvradGrpiVlRa 43 
                  L++ G+p+++  +   ++++a
  KHJ31595.1 472 YLDSYGVPVPQGSKKNALIAWA 493
                 69999***99988888888886 PP

>> Apolipoprotein  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.18   2.2e+02      91     129 ..      78     116 ..      66     180 .. 0.48
   2 ?   -2.3   0.0       2.9   3.5e+03     134     153 ..     229     248 ..     209     255 .. 0.51
   3 ?    0.5   0.4      0.41   4.9e+02     130     160 ..     300     330 ..     221     340 .. 0.55
   4 ?    6.6   0.0    0.0053       6.4      66     123 ..     392     449 ..     391     463 .. 0.88
   5 ?   -1.6   0.2       1.7   2.1e+03     156     177 ..     537     558 ..     516     566 .] 0.44

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.18
                     HCCHHCHCCHCHHHHHHHHHHHHHHHHHHCHHHHHHHHH CS
  Apolipoprotein  91 eelqeqlavyaeelrerlerhvealkarlapyveelrqk 129
                     ++l   l++++ e++++++++ + l +r++ ++ e +++
      KHJ31595.1  78 NQLSSYLKEKGVEIKDSTAESKDGLISRVKNIWSEKVDQ 116
                     444444444444444444444444444444333333322 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 2.9
                     HHHHHH-----..-----SS CS
  Apolipoprotein 134 leelkeslaphaeeveerls 153
                     + + + s++ +a++v e+ls
      KHJ31595.1 229 ARNAQASATKSAASVSETLS 248
                     22333333333333333333 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.41
                     HHHHHHHHHH-----..-----SSSHHHHHH CS
  Apolipoprotein 130 laerleelkeslaphaeeveerlssrveelr 160
                      +  +  l++++ +++ +ve++ s+  ++++
      KHJ31595.1 300 AKNVVGKLGDTFGAATSSVEDQYSKATDDAQ 330
                     2223333333333333333333333333333 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.0053
                     HHHHHHHHHCCHHHHHHHHHHHHCHHCCHHCHCCHCHHHHHHHHHHHHHHHHHHCHHH CS
  Apolipoprotein  66 qnleelrqrlapyteelrerlaadaeelqeqlavyaeelrerlerhvealkarlapyv 123
                     +++e+l++ la+  ++  e++   + + ++ql + a+++ + ++r+ +++ a ++ y+
      KHJ31595.1 392 WSTENLKKFLASSGNKASEQIGNTVGASRDQLLSAAQDVYTTASRSSGSTFASITSYL 449
                     8899999999999999999999999999999999999999999999888888877775 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 1.7
                     HHHHHHTS-TTSHHHHHS--XX CS
  Apolipoprotein 156 veelrekleeqaeelrerlean 177
                     ++ ++ek++ + +   e ++ +
      KHJ31595.1 537 ADTVKEKATYASNRADEAAQVA 558
                     2222222222222222222222 PP

>> DUF445  Protein of unknown function (DUF445)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.2     0.088   1.1e+02     115     248 ..      54      97 ..      20     180 .. 0.50
   2 ?    6.8   2.1    0.0042         5      56     145 ..     211     294 ..     208     478 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.088
      DUF445 115 kkleevipepllgkllellleeerhkkllddlldriknllkdeevkekikelidelieeesgklvlesivsmflreltsilekvksdpdhllreeedkk 213
                 k le++i e++++k+          ++ +d+ +++++ +lk++ v+                                                     
  KHJ31595.1  54 KDLEKIISENWDSKI---------NQPYTDWDVNQLSSYLKEKGVE----------------------------------------------------- 90 
                 444444444444444.........2233333333333333333222..................................................... PP

      DUF445 214 vreliadllndpelaakveklkkkklsdlevqeye 248
                                             ++ ++ e
  KHJ31595.1  91 ----------------------------IKDSTAE 97 
                 ............................2222222 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0042
      DUF445  56 keslakkLkeaevasklaewlknptnkeslaaiveellkeiledlddesikellkknlkkkleevipepllgkllellleeerhkklldd 145
                  ++l++ ++++ + ++l++  ++ + ++s a+  e+l ++ile+++d+++ke+l+kn  +  +    ++ll+ +       ++  klldd
  KHJ31595.1 211 RDKLIASVRRNSRIASLKARNAQASATKSAASVSETLSDKILESWSDSKLKEILDKNGVNVPQGSKTSELLALA------RKYRAKLLDD 294
                 56777777777777777777777888888899999999******************988444444444444433......3333333333 PP

>> Grg1  Glucose-repressible protein Grg1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.3       0.5     6e+02      31      60 ..     229     258 ..     223     261 .. 0.82
   2 ?    5.9   0.6     0.012        15      30      64 ..     299     333 ..     295     335 .. 0.91
   3 ?   -2.8   0.0       6.6   7.8e+03      41      56 ..     452     467 ..     447     469 .. 0.76
   4 ?    5.8   3.4     0.014        16       4      56 ..     515     565 ..     514     566 .] 0.86

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.5
        Grg1  31 aKdsnasigdRasAakdavsDKidekkhda 60 
                 a++++as ++ a +  + +sDKi e+  d 
  KHJ31595.1 229 ARNAQASATKSAASVSETLSDKILESWSDS 258
                 668888888888888999999999887665 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.012
        Grg1  30 vaKdsnasigdRasAakdavsDKidekkhdakAea 64 
                 +aK++  ++gd   Aa + v D  ++ ++da+ +a
  KHJ31595.1 299 TAKNVVGKLGDTFGAATSSVEDQYSKATDDAQLKA 333
                 7999*9***********************998655 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 6.6
        Grg1  41 RasAakdavsDKidek 56 
                 +++ akd v D  +e+
  KHJ31595.1 452 QTDTAKDSVFDTWSES 467
                 6778999999987775 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.014
        Grg1   4 iknaanyVsekvqgataeaskeanKevaKdsnasigdRasAakdavsDKidek 56 
                 ++n a    ++v++  ++a+  a  +++K++    ++Ra+ a  +++DKi+e+
  KHJ31595.1 515 LQNGASWAWDQVSAGRKQAEIAA--DTVKEKATYASNRADEAAQVAGDKIKEE 565
                 67888888888988888887776..599*9********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       824  (0.0459591); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 4179.28
//
Query:       KHJ31596.1  [L=186]
Description: putative pci domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 1527.90
//
Query:       KHJ31597.1  [L=227]
Description: putative rwd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.9e-24   83.9   0.9    9.9e-24   83.9   0.9    1.6  2  RWD        RWD domain
      0.002   18.6   5.3      0.002   18.6   5.3    2.0  2  DFRP_C     DRG Family Regulatory Proteins, Tma46
  ------ inclusion threshold ------
      0.025   15.0   3.5        0.5   10.7   4.2    2.1  2  R3H-assoc  R3H-associated N-terminal domain


Domain annotation for each model (and alignments):
>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.9   0.9   1.7e-27   9.9e-24       1     116 []       4     118 ..       4     118 .. 0.87
   2 ?   -2.0   0.1      0.71   4.3e+03      79      79 ..     166     166 ..     123     196 .. 0.54

  Alignments for each domain:
  == domain 1  score: 83.9 bits;  conditional E-value: 1.7e-27
                 HHHHHHHHHHHHHSTTTCCCCHT--EE--S-EEEEEEECECCCC....TT-CEEEEEEEEE-SSTTSS--EEEEEECC......SS-..HHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxx..xxxxxxxxxx RF
         RWD   1 eeqeqEleaLesIypdefevienenysikleikikldededeedsefeekkkpslkleiklpeeYPeeaPiislsste......nlp..keqvksleek 91 
                 eeq +E ++L sI+pde+++i++++++    ++i+ld   ++     e++k+ ++ l++k+p++YP+++Pi+++  +             e+ k+l + 
  KHJ31597.1   4 EEQIEERDVLVSIFPDEMQEISDSEFQ----LSINLDAATQDG----EDTKPLNIILNVKYPPDYPDVPPILEILPSSdgsiqtF-FnvTEDAKDLLDS 93 
                 79************************9....555555555543....3578*************************997755551.05689999***** PP

                 HHHHHHHTTTS--CHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD  92 leelaeenlgepvifalidwlkenl 116
                 l+e+++en g+++if++++ lken+
  KHJ31597.1  94 LKETIDENEGMVMIFTIVSTLKENA 118
                 ***********************96 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.71
                 S CS
                 x RF
         RWD  79 n 79 
                  
  KHJ31597.1 166 F 166
                 0 PP

>> DFRP_C  DRG Family Regulatory Proteins, Tma46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.5     0.069   4.1e+02      27      47 ..     126     146 ..     113     150 .. 0.65
   2 !   18.6   5.3   3.3e-07     0.002       5      65 ..     135     197 ..     134     219 .. 0.63

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.069
      DFRP_C  27 FakWKkkrlekkeaeeekeek 47 
                  ++W +k+ ek  ++e+ke++
  KHJ31597.1 126 QQEWQQKQDEKFMEAESKENS 146
                 467887777777666666544 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 3.3e-07
      DFRP_C   5 EefiEteRakLdk.klTpvtletFakWKkkrlekkeaeeekeekkkkke.glsGrelfefnpe 65 
                 E f+E e ++ +k + Tpvt+etFa W+k+   + e+ ++++ + ++   +  G++ ++++++
  KHJ31597.1 135 EKFMEAESKENSKfHGTPVTPETFAIWRKNFFLEMEELKSQKLEMEELAeKKKGKAKVKVKDD 197
                 7899999999999999***********998544333333222222111112345555544444 PP

>> R3H-assoc  R3H-associated N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.062   3.7e+02      47      94 ..      48      95 ..      31     105 .. 0.74
   2 ?   10.7   4.2   8.4e-05       0.5      42     113 ..     125     197 ..     112     209 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.062
   R3H-assoc 47 d....emdesdaepplpsdfeklptseenaelWddflnlseeeqerilasle 94
                     +++++   p++p+++e lp+s+ +    ++f+n  e++ + +l+sl+
  KHJ31597.1 48 LniilNVKYPPDYPDVPPILEILPSSDGS---IQTFFNVTEDA-KDLLDSLK 95
                1556677888899999*********9999...66788888887.44555555 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 8.4e-05
   R3H-assoc  42 eeieed...emdesdaepplpsdfeklptseenaelWddflnlseeeqerilasleesekkrkkkektpvsgedk 113
                   +e++   +++  +ae++ +s f   p  +e   +W + + l++ee ++   ++ee ++k+k k+  +v+++d+
  KHJ31597.1 125 RQQEWQqkqDEKFMEAESKENSKFHGTPVTPETFAIWRKNFFLEMEELKSQKLEMEELAEKKKGKA--KVKVKDD 197
                 2233334448888899*******************************9999989999988888885..6666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1364  (0.0760779); expected 358.6 (0.02)
Passed bias filter:                      564  (0.0314574); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.21s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 1840.65
//
Query:       KHJ31598.1  [L=312]
Description: hypothetical protein EV44_g3365 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0001   22.0   0.0     0.0019   17.8   0.0    2.3  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.1e-07    0.0019       3     131 ..      70     212 ..      68     217 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.1e-07
  Retrotran_gag_2   3 kkdakalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfsl..kmkegesvadhinkleelvneLsa........... 83 
                      + ++ al++ ++ i  + l+ v e +t+ ++W  L +ly +++a   ++    l++l  +++ +  ++++i ++e+ + +L +           
       KHJ31598.1  70 SLNDCALGIFIQVIHGDILKGVVEMETTNDIWLYLISLYHRDTAFALVHQVGSLCQLgwMFDHTRPISEFIINFESEWFKLLKltrdssdtyrq 163
                      56899**************************************988887777777663367888899999999998777776657777777776 PP

  Retrotran_gag_2  84 .....lgvkiddedkvvllLasLPesyetfvtaiesseedltleeviekllee 131
                           lg   +d+ k   lL   ++  +++v+++ + +++lt+ ev+++ll+ 
       KHJ31598.1 164 qfavfLG---NDKAKRDFLLGLISRHHKNIVDNLTT-KDNLTFAEVKQRLLDS 212
                      6544333...47777778888889999999999988.8899999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       892  (0.0497518); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2221.16
//
Query:       KHJ31599.1  [L=859]
Description: putative frequency clock protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   1.3e-122  410.8  45.8   1.1e-121  407.7  45.8    2.1  1  FRQ        Frequency clock protein
  ------ inclusion threshold ------
      0.018   15.5   0.2      0.067   13.7   0.2    2.0  1  DUF3106    Protein of unknown function (DUF3106)
      0.077   13.1   0.0       0.18   11.9   0.0    1.6  1  pP_pnuc_2  Predicted pPIWI-associating nuclease


Domain annotation for each model (and alignments):
>> FRQ  Frequency clock protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  407.7  45.8  1.8e-125  1.1e-121      36     848 ..      57     818 ..      49     854 .. 0.72

  Alignments for each domain:
  == domain 1  score: 407.7 bits;  conditional E-value: 1.8e-125
         FRQ  36 assgsaaakassessssprrnssge..shetgqsdpkkWfdqsnenPtatfdsnamdvdpPff.qkesdssnedkpvsypkklkppklsaarsssadDY 131
                 +++++  a+ s+  +ss  r s  +    e   ++ +kWfd  n+ P  t  s+  d  +P+f q++  +s    +++++ ++ p    + r  s+dDY
  KHJ31599.1  57 NAPSQENASVSE--NSSLSRLSDENcsISEDYSTNLHKWFDDFNRHPEKTA-SKYRDTGSPYFlQQNLTTSS---RFNSEIAQIPDANYSRRTGSTDDY 149
                 444555555544..44444444333103455567889***********998.99999999988344444443...3444455789999999******** PP

         FRQ 132 rsviDDLtveikkLkeeLkrykqkGpdllrkdkLfeikvhGLPkrkkreLeatLrdfaasl.edspdaesssrrkkssrhatrdklesgsgslskhass 229
                 rsviDDLt+e+k+L++ L+r+k+  +  l kdkLfeik+h LP  k+reLe++L  fa+s+  +s    ss++     + ++      + +s+sk  ss
  KHJ31599.1 150 RSVIDDLTIENKRLRKKLRRFKKLSSKQLEKDKLFEIKIHDLPPAKRRELESALHSFASSIdFSSCGLRSSEQSLG--QSQS-----PEETSISKKKSS 241
                 *************************************************************445555555555333..2222.....234566666666 PP

         FRQ 230 ssGs.nsrpvDsaYas..mstg..anssGtslarpslssraks..seqkvenYLrd.iPeGLyPrhlv.ltdkekkkLvvrrLeqlftGkisGrnlrrk 319
                 +s s ns    s+Y s  mst   +  s + +  ++ s+  +   ++   ++Y++    e L   ++  + d++kkkLvv+rLeq+ftG  +       
  KHJ31599.1 242 TSSSiNSNLEQSSYDSaiMSTLltTVNSEPNIFETEKSTSLNPgfNTCESQSYVKPpCSEKLSKYSIKdMSDRQKKKLVVQRLEQIFTGEKAAVM---G 337
                 555523344445555433454322666777777776666655435888999****63678888877745*******************9744333...3 PP

         FRQ 320 qakasaevaavlaelapevateqkstvheppklktaakepsrearilaeeqqsgesekksrskdngsasnsngdqtesggngassrsgtntsPpdapap 418
                  +++s          + +++++   ++he+ +l   +   +rea++ ++e       + s s+  +   ns+     + +++ ss    +   ++++ +
  KHJ31599.1 338 MPHQSL---------NKDETSK---QTHENEHL--MNYGRVREAHMIPQE-------NYSYSRPIDLLDNSE-----TKTSSHSS----DETNSNESFS 406
                 333321.........1121111...22333323..345789*********.......556677777777766.....22222222....3333567899 PP

         FRQ 419 eqrPtrpkDLDPdrvqvPsenmdYirhLGlvpPellaekseeDvspDaeGWvYLnLlCnlaqLhilnvtPdfvrsavsekstkfqLspDGrkirWrGgt 517
                 +qrPtr ++LDPdr+q+Ps+n++YirhLGl +P+l + +++eD s +  GWvYLnLl n+aqLhi+nvtPdfvrsa +++s k  Ls+DG+ +rW+Gg+
  KHJ31599.1 407 NQRPTRLRELDPDRTQIPSDNVEYIRHLGLSTPQLAN-DESEDGSKEKGGWVYLNLLINMAQLHIINVTPDFVRSALVDVSEKIELSKDGQMLRWKGGS 504
                 **********************************987.67899******************************************************** PP

         FRQ 518 dGtkfssd..ssgdksqkspstedtdeskeekrkkqkterstkdglsessskeaskfgpqvsassdsfhYkPlfvhqsssneqtslddtlssfgpvees 614
                  Gt    d  ssg+ s +s +     ++ ++  k + ++++ +  +   +s+  ++       s   fhYkPlf  + ++++ +  d++ s    v+es
  KHJ31599.1 505 LGTNLHNDdsSSGKLSCHSSK-----RKGSHVYKSREKTEFPARRI---NSSALNEP----HPSLTDFHYKPLFFPRVTPEQASESDESPSGPSLVDES 591
                 ****99882233444444444.....22223333333333333322...22222233....447788******************************** PP

         FRQ 615 nagesrw...glsGsGtskrrkrrrDGaiiYYsGaPfCtDLsGDpGDvs..PtsyllssgqdkeessaqlsrpapqrtesGsslayrPLsdakkalssa 708
                   ++  w    +s   + +  kr+ DG++++Y Ga fC+DLsGDp  +    ts l   ++ +++ s++++ p+ +rt+sGs l++rP +d k   +  
  KHJ31599.1 592 ICSQDLWcqpRKSRPLSCSIGKRQEDGSLVFYRGADFCVDLSGDPESTTqlSTSILEQDSEGEQNLSEESHSPIIERTSSGSLLPFRPFKDPKSL-DLR 689
                 *99998833235666788999************************88762245666666677777779999999*****************6532.222 PP

         FRQ 709 vklevdeeepelvtds.ddessdiel.efpWsdkqqaleveklepcGLGGvlPdDhfmvvvttkrskkdalasqssseklseeaaeaiverlasmstss 805
                    +++  +p++ + s ++++ ++el  fp  ++q  +  + l+pcG+GG    Dhf + v t+ s+++a +s ++       ++++ +er +  + ss
  KHJ31599.1 690 ---SIE--DPNSYQSSeNSSNCQLELsRFPTETHQGPIVPQALQPCGIGGSQISDHFEIHVLTQHSVTSANNSDNN---Y---STSNNIERKT--ELSS 775
                 ...222..23333333033344555515777777789999************************999988877764...2...2334455543..3477 PP

         FRQ 806 pvelakkklskeesakieieYlsgrikrlaPvpLPPPaiffpp 848
                 p ++a++  +k+ + +++ +  s+ ik l+ ++    +   pp
  KHJ31599.1 776 PEQKAESLPMKTLEDRVNDQVASRGIKSLSLISSSQKVSLTPP 818
                 7778888888888888888888888888865554444444444 PP

>> DUF3106  Protein of unknown function (DUF3106)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.2   1.1e-05     0.067      43      91 ..     158     206 ..     118     209 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.1e-05
     DUF3106  43 eeqkrlqermeewakLspeqreqarenyqklkqLppeereelrekweey 91 
                  e krl++++++++kLs +q e+ +    k+++Lpp++r+el+++ + +
  KHJ31599.1 158 IENKRLRKKLRRFKKLSSKQLEKDKLFEIKIHDLPPAKRRELESALHSF 206
                 3789***************************************999887 PP

>> pP_pnuc_2  Predicted pPIWI-associating nuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.1e-05      0.18      15      79 ..     787     852 ..     778     857 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.1e-05
   pP_pnuc_2  15 kiedevidelieetveeldeLathtvveeieiedvevseideekikle.vegtveVelqYGsksDl 79 
                 ++ed+v d++ +  +++l+ ++++  v  +  ++v+ + i++e+++l   +     +lqY s+sDl
  KHJ31599.1 787 TLEDRVNDQVASRGIKSLSLISSSQKVSLTPPSQVQSKIISSETVYLPpSKLPSPATLQYSSDSDL 852
                 67899999999***********************************9725667789********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (859 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1277  (0.0712254); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.30s 00:00:01.01 Elapsed: 00:00:00.46
# Mc/sec: 5667.69
//
Query:       KHJ31600.1  [L=128]
Description: hypothetical protein EV44_g3651 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.096   12.6   0.0       0.11   12.4   0.0    1.1  1  Cas6      Cas6 Crispr


Domain annotation for each model (and alignments):
>> Cas6  Cas6 Crispr
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   6.1e-06      0.11      92     170 ..      48     126 ..      16     127 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.1e-06
        Cas6  92 pklrllepastLkarlVvikgaedeeaFleavqrqLealeikgkkall.gkrrtlkikekkvvgfsllvsgLsaedSlrl 170
                  + r l++ s+ +ar+ v  ++++ ++   +v ++++ ++ + + +   g r+ lk ++++ + f + ++gL + +S++l
  KHJ31600.1  48 WTRRSLQDDSNSFARICVPGNKASKSKVQLHVTNAMDFIQLQLQNIRAaGGREYLKAQNEN-MEFDVNLAGLASTESVSL 126
                 567899************************************999988689*****99988.57*************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       464  (0.0258799); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 941.85
//
Query:       KHJ31601.1  [L=157]
Description: putative trafficking pga2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-27   95.0   0.1    4.7e-27   94.7   0.1    1.1  1  PGA2      Protein trafficking PGA2


Domain annotation for each model (and alignments):
>> PGA2  Protein trafficking PGA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.7   0.1   2.6e-31   4.7e-27       2     137 ..      18     147 ..      17     148 .. 0.83

  Alignments for each domain:
  == domain 1  score: 94.7 bits;  conditional E-value: 2.6e-31
        PGA2   2 tnlsesfssltakdwirlvlivggYlllRPYleklfkklqekqrekeeekeeaeekaakkakvspnalRggeaksgesdedddegeeeedvakasgvpe 100
                 +n+ ++++ +  +d+ir+v+ivg+Yll+RPYl kl++k+q+k+ +k++         ++k+k+spn+lR+g +   ++ +dd e+e+        +++ 
  KHJ31601.1  18 RNVTGMWDGMRPRDYIRIVVIVGAYLLIRPYLLKLAAKVQAKEFAKHNPSICIP---SEKGKLSPNDLRDGSQ--MKVKNDDAENES----LGIVSGSG 107
                 699*****************************************9998877555...4579**********96..588888888877....7889999* PP

        PGA2 101 wgkkarkrqkk...vlkkleeeaeerkkeeeddkdiaelL 137
                 wg+kar+rq k   ++ kl+e+++++ k+e+++ +i e+L
  KHJ31601.1 108 WGEKARRRQSKnetTNSKLNERQKSDLKDEKKNVNILEYL 147
                 *********8822234556666666666777777777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1249  (0.0696637); expected 358.6 (0.02)
Passed bias filter:                      619  (0.0345251); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1216.92
//
Query:       KHJ31602.1  [L=254]
Description: putative thioredoxin-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.5e-05   22.5   0.0    0.00015   21.8   0.0    1.3  1  AhpC-TSA_2  AhpC/TSA antioxidant enzyme


Domain annotation for each model (and alignments):
>> AhpC-TSA_2  AhpC/TSA antioxidant enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   8.6e-09   0.00015      12     107 ..     133     231 ..     124     236 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 8.6e-09
  AhpC-TSA_2  12 agvklvaigigdps.akkFvkl..tgfpfelyvDpsaklyqalglkrglklklaplslqkalenllkrlkeigipgdlageltqrGGtflfdkqgelvy 107
                  +++++ai++ + +  +k+ k     + +++++D+++++y+++gl+ + + +l+ + +q a ++l +    +   +d++++ +  GG +  ++ g++++
  KHJ31602.1 133 PNISCIAISHCSSQaTEKWLKDlgGAWAVQIIIDEDREVYAHWGLGISSTYHLMNPWTQIAARKLGNEEGIWARDVDESANRWVIGGAWCTNNLGSIQW 231
                 6899*****999966*****8877889999****************99999998776666666555555445667888999999999998888777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1889.83
//
Query:       KHJ31603.1  [L=204]
Description: putative adp-ribose pyrophosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-17   61.6   0.0    1.2e-16   61.0   0.0    1.2  1  NUDIX     NUDIX domain


Domain annotation for each model (and alignments):
>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.0   0.0   6.5e-21   1.2e-16       5     115 ..      55     171 ..      52     183 .. 0.74

  Alignments for each domain:
  == domain 1  score: 61.0 bits;  conditional E-value: 6.5e-21
                 EEEEE.EEETTSE..EEEEEESSSSTTT.EE..SSEEECBTTSHHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE..EEECSG CS
       NUDIX   5 avgvv.llnekge..vLlvrrskkpfpg.We..lPgGkvepgEtpeeAArREleEEtGleaellellgrlhylapydgpygdeheilyvfl..eevege 95 
                 avg+v +l+  +   ++l++++ +p+ +  +  +P+G v++gEtpe+AA+REl+EEtG++  ++ + +++     + +++++ ++i +++    +++ +
  KHJ31603.1  55 AVGIVaILDLPTGpeIVLQKQF-RPPVNtVCieIPAGLVDEGETPEQAAIRELKEETGYI-GEISISTSIML-NDPGFCNTNLKMIHMTVDmnNPKNQN 150
                 788888777776668*******.7777764345*************************74.47777776644.44446666666676666675555555 PP

                 CSST.STTTEEEEEEEEHHHH CS
       NUDIX  96 lepn.denevsevrwvpleel 115
                 ++p+ +ene+ ev  +pl+ l
  KHJ31603.1 151 PQPElEENEFIEVFTLPLKSL 171
                 555599*******99999888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1447.63
//
Query:       KHJ31604.1  [L=743]
Description: putative bactericidal permeability-increasing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.9e-06   26.1   0.2    7.9e-05   22.8   0.0    2.6  3  DUF4449    Protein of unknown function (DUF4449)
  ------ inclusion threshold ------
      0.016   15.0   1.6        1.1    9.1   0.2    2.6  2  ATP13      Mitochondrial ATPase expression
       0.12   12.5   0.0       0.48   10.6   0.0    1.9  1  NFACT-R_2  NFACT protein RNA binding domain


Domain annotation for each model (and alignments):
>> DUF4449  Protein of unknown function (DUF4449)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.19   1.1e+03      55      85 ..     180     209 ..     165     220 .. 0.66
   2 ?   -3.6   0.0       1.8   1.1e+04      53      74 ..     332     353 ..     329     367 .. 0.70
   3 !   22.8   0.0   1.3e-08   7.9e-05       1      66 [.     592     657 ..     592     741 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.19
     DUF4449  55 evkqeaerakeeaksdpenapniysryldal 85 
                 +v+++ae   ++  +++++a+n+ ++y da 
  KHJ31604.1 180 TVSNTAEAMANK-VEKSNDAENYNNKYGDAK 209
                 455555533333.334666777777777775 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 1.8
     DUF4449  53 lyevkqeaerakeeaksdpena 74 
                 + e++++ ++ +e++k+dp+ +
  KHJ31604.1 332 WIELQTRFDKIMEHSKNDPDFE 353
                 6778888899999999988754 PP

  == domain 3  score: 22.8 bits;  conditional E-value: 1.3e-08
     DUF4449   1 vdvdnLkiklkkSkHklLfklfKPlllkvirpaiqkalekqirdaleklDaelyevkqeaerakee 66 
                 ++++n+  +l+kSk++ L  l+KPl+ + +r  +++ l+k++ d ++ + +el   +++   a+ +
  KHJ31604.1 592 IKIHNFTYNLRKSKFSCLAWLLKPLIRTTLRGNLERQLTKSMSDFFHAANRELLFARERLRAARIS 657
                 589*************************************************99998888766543 PP

>> ATP13  Mitochondrial ATPase expression
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1    0.0051        30      55      88 ..     258     291 ..     218     301 .. 0.84
   2 ?    9.1   0.2   0.00019       1.1      66     107 ..     308     345 ..     296     353 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0051
       ATP13  55 elLkaivssfsynneiesAlklvdkfskkYpeie 88 
                 + Lk+ v+ + ++n+++  +k+v+ ++++Y+ei 
  KHJ31604.1 258 HRLKTAVTKLRQRNDYSDSIKIVSLLIRQYSEIY 291
                 6689999999********************9875 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00019
       ATP13  66 ynneiesAlklvdkfskkYpeielkkefWeellewaiiltsk 107
                  n+++e A+k++ +fs++++    +ke+W+el+ + +++ ++
  KHJ31604.1 308 TNESLELAMKIIWSFSSSFG----DKEVWIELQTRFDKIMEH 345
                 46699***************....99******9877666655 PP

>> NFACT-R_2  NFACT protein RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   8.1e-05      0.48      25      84 ..     280     340 ..     268     350 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 8.1e-05
   NFACT-R_2  25 kgllkkdfvslrakshkGplvlidgels.eedlelaarivarYskgkeeeevevkvkkkeg 84 
                  +ll +++ +++ +  + ++ +++++++ +e lela++i+  +s+   ++ev ++++++ +
  KHJ31604.1 280 VSLLIRQYSEIYSRAANQAISVVQNDINtNESLELAMKIIWSFSSSFGDKEVWIELQTRFD 340
                 55555677788999999999***8766559***************9999999999887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (743 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       818  (0.0456244); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.23s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 5327.45
//
Query:       KHJ31605.1  [L=214]
Description: putative ribosomal protein l24e [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.11   12.6   0.1       0.43   10.7   0.0    1.9  2  DUF1905   Domain of unknown function (DUF1905)


Domain annotation for each model (and alignments):
>> DUF1905  Domain of unknown function (DUF1905)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   2.4e-05      0.43      16      45 ..      59      92 ..      45      95 .. 0.87
   2 ?   -1.2   0.0      0.12   2.2e+03      28      41 ..     146     159 ..     130     177 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 2.4e-05
                EEE--S-HHHHH......-.SS-EEEEEEETT.E CS
     DUF1905 16 fvevPedvseel....ktggkgsvkVkatidgtt 45
                f ++Pe+ + ++     +g+ g+v+V++t+d+++
  KHJ31605.1 59 FGDIPESKKRKFilvdDPGKSGRVRVRVTLDTVN 92
                557999999999999999*************975 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.12
                 ..-.SS-EEEEEEE CS
     DUF1905  28 ktggkgsvkVkati 41 
                  ++gkg +++++ +
  KHJ31605.1 146 LRNGKGNIRISVSL 159
                 46778888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       322  (0.0179597); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1570.91
//
Query:       KHJ31606.1  [L=506]
Description: putative ribosomal protein l24e [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       851  (0.047465); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.73u 0.28s 00:00:01.01 Elapsed: 00:00:00.44
# Mc/sec: 3440.31
//
Query:       KHJ31607.1  [L=645]
Description: putative capsule-associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.3e-18   64.5   8.2    4.1e-15   55.6   5.7    3.1  2  Glyco_transf_90  Glycosyl transferase family 90


Domain annotation for each model (and alignments):
>> Glyco_transf_90  Glycosyl transferase family 90
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0   9.8e-05       1.7      71      94 ..     230     253 ..     222     262 .. 0.85
   2 !   55.6   5.7   2.3e-19   4.1e-15     104     323 ..     383     634 ..     373     639 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 9.8e-05
  Glyco_transf_90  71 LlrkypgklpDlelmfncdDrPvv 94 
                      +++++   lpD++l fn++D P v
       KHJ31607.1 230 MIKSFVNYLPDMDLAFNIHDEPRV 253
                      56677788**************98 PP

  == domain 2  score: 55.6 bits;  conditional E-value: 2.3e-19
  Glyco_transf_90 104 aappPlfsycgdeetlDivfPdwsfw.gwpevnikrwslllkelkegnkkvkweerepyaywkGnps.........vaetReeLlkcnrskkel 187
                      ++ +P+fs ++ ++ +Di++P   +w g                 e ++ + w++++ + yw+G+ +         + ++R+ L++     ++ 
       KHJ31607.1 383 HDLMPVFSQSKISSFNDILYPSPWYWsGKVPY-------------EDSSDPAWTKKKDQMYWRGSTTggfsrdgswRRQHRQHLVQK---INSN 460
                      46799999999999999999998888343333.............455666677777777777766511111110033345555543...2334 PP

  Glyco_transf_90 188 vdarltkq......................................dekkeskegvkessledqckhkYkiyieGvaasvsekyilacdslvll 243
                       +a++  +                                      d++ke     k+ + +d  k+kY i i+G a s ++   l  +slv +
       KHJ31607.1 461 GNAKILVNrgnetgedwqvkeisrsdyrelfdvhfshvgqcdpgdcDAQKEFFGIKKQAKQNDAWKYKYLIDIDGNAFSGRFYAFLKSKSLVYK 554
                      4555555578889*******************************999999999999************************************98 PP

  Glyco_transf_90 244 vkpeyydffsreLkplehYvPikskdklrdlkeavdwgnah...dekaqeiaeegseFireeLkmddvydYmfhLlteYakll 323
                        + + ++  + Lkp++h++P++   + ++  e+v+w   +   +++aq+ia +g+e +++ L+ +d+  + f+Ll eY++++
       KHJ31607.1 555 L-AVFREWHAEWLKPWVHFIPMTL--RGEEWIELVRWFAGEdlgKREAQRIAFQGRESANKMLRNEDLEVWLFRLLLEYGRVV 634
                      7.57******************99..88999999***876522269*********************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (645 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       728  (0.0406046); expected 358.6 (0.02)
Passed bias filter:                      591  (0.0329634); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 4511.48
//
Query:       KHJ31608.1  [L=309]
Description: putative ubiquitin-conjugating enzyme [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-19   70.1   0.0    2.3e-19   69.4   0.0    1.3  1  UQ_con    Ubiquitin-conjugating enzyme


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.4   0.0   1.3e-23   2.3e-19       1     111 [.      15     126 ..      15     146 .. 0.89

  Alignments for each domain:
  == domain 1  score: 69.4 bits;  conditional E-value: 1.3e-23
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGGGS..TTT--TTSHH CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldiLk..eekWspaltl 97 
                 r+ +e++ela+++++ ++a++v+d +lf w+++i gp+ +++e g+++ ++ +p++YPl+pP+++f ++     v++  e+cl+i    ee+W pa+ +
  KHJ31608.1  15 RILHEAAELAQSPSPDFHAAPVNDADLFDWHFTIRGPPSSVFESGIYHGRILLPPTYPLRPPSFRFLNSSGRFEVNR--EICLSISGhhEETWMPAWGV 111
                 68899***************************************************************999988887..7999997533666******* PP

                 HHHHHHHHHHH.HS- CS
      UQ_con  98 esvllsiqsLl.aep 111
                 +++l+++ s++ ++p
  KHJ31608.1 112 RTALVALRSFMeTDP 126
                 *********994455 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       808  (0.0450667); expected 358.6 (0.02)
Passed bias filter:                      625  (0.0348597); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2299.40
//
Query:       KHJ31609.1  [L=275]
Description: putative nicotinamide mononucleotide adenylyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-21   77.6   0.0    1.4e-21   77.2   0.0    1.1  1  CTP_transf_like  Cytidylyltransferase-like


Domain annotation for each model (and alignments):
>> CTP_transf_like  Cytidylyltransferase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.2   0.0   7.6e-26   1.4e-21       1     141 [.      40     227 ..      40     229 .. 0.92

  Alignments for each domain:
  == domain 1  score: 77.2 bits;  conditional E-value: 7.6e-26
                      EEEE--TT--HHHHHH..HHHHHHHSSES.EEEEEESSTHCSST-.SCSSTHHHHHHHHHHH.TTCTTEEEEEEESEHH............... CS
  CTP_transf_like   1 lagGtFDpiHlGHlrl..leqakklleed.livgvpsdeppkkkk.kplasaeeRlemlela.kevdevisvdpweltr............... 74 
                      +a+G+F pi++ Hlr+  l + ++++++   i+g + +++++++k  +l+ + +Rl+m++la  e++ +++vdpwe  +               
       KHJ31609.1  40 VACGSFSPITYLHLRMfvLSWDFAKFNTNfEIMGGYISPVSDSYKkAGLVESRHRLQMCQLAvNENPTWLMVDPWEALQstyvrtapvldhfeh 133
                      69************9833467788888889*************966********************************************8888 PP

                      ....HHHHHTTTT......EEEEEEEHHHHHHHHCHH.....HHHHHHHHHHHEEEEEE............HTTCEEEEEEECCTTTCSHHHHH CS
  CTP_transf_like  75 ....evlkklkpd......klylvigadvledfsewk.....eleeilgnvklvvvsrp............ekqanvllkaekrtngiSstkir 141
                          ++   +kpd      k++l++gad+++++ ++      +l +ilg ++l v++r               ++n+++  + + n++Sstkir
       KHJ31609.1 134 einhKLGGAQKPDgtrvpmKIALLAGADLIQTMTTPGvwsesDLAHILGQYGLFVIERGgtdlenalagleRWKENIFVVQQLIHNDVSSTKIR 227
                      8777777777778999999*************9887799999****************************98999999***************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       287  (0.0160076); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 2124.50
//
Query:       KHJ31610.1  [L=220]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.19s 00:00:00.58 Elapsed: 00:00:00.35
# Mc/sec: 1857.61
//
Query:       KHJ31611.1  [L=646]
Description: putative ph-response regulator protein pali rim9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-27   94.5  15.1    9.4e-27   94.0  15.1    1.2  1  SUR7      SUR7/PalI family


Domain annotation for each model (and alignments):
>> SUR7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.0  15.1   5.2e-31   9.4e-27       5     211 ..       8     165 ..       5     166 .. 0.93

  Alignments for each domain:
  == domain 1  score: 94.0 bits;  conditional E-value: 5.2e-31
        SUR7   5 llflslaalilllfailgsiknstpltsiylskfdlsgldlaqigladvysfgvwgyCdnsdvnytkCskpkagypfdpleelnsesngkvdlPsnlrk 103
                 l++l+l+a+ ll++ i++++     ++ + l++f                +fgv+g+C     + ++Cs+ ++gy  +  + ln++++++ dlPs++r 
  KHJ31611.1   8 LTVLLLGAFSLLILSIISTP----IVRTFPLASFAGI-------------DFGVFGFC-----KADTCSPIEIGYDTS--NLLNDTQSSTFDLPSSARA 82 
                 56777788777766666544....66799********.............********.....************999..999***999999******* PP

        SUR7 104 tlsklnnltkalfilhiialvlsfislvvgllaicvspdnsrllsflnlllsvlsflatllaalldtllfvfvrkkinlkefgikaslglkflafaWla 202
                 tls+       ++++h+ia++l++i+l+++  a++++p++s++++++ ++ls+l+++a+ll++l+d+llfv                +++++ +  +l+
  KHJ31611.1  83 TLST-------ILVVHPIAAFLTLIMLILAASAHFHTPSHSPRYLLIIFILSILTLVAALLSFLIDILLFV----------------PHMAWGS--YLV 156
                 ****.......9***********************************************************................*******..*** PP

        SUR7 203 laaallvvi 211
                 laa++lv i
  KHJ31611.1 157 LAATILVGI 165
                 ******988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (646 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       852  (0.0475208); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4563.88
//
Query:       KHJ31612.1  [L=811]
Description: putative myb dna-binding domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0017   18.5   0.3     0.0036   17.4   0.3    1.6  1  Myb_DNA-binding  Myb-like DNA-binding domain
     0.0091   15.8   0.2      0.028   14.3   0.2    1.9  1  HTH_5            Bacterial regulatory protein, arsR family
  ------ inclusion threshold ------
      0.042   14.1   0.5       0.38   11.0   0.1    2.5  2  Myb_DNA-bind_6   Myb-like DNA-binding domain
      0.053   13.5   0.0       0.29   11.1   0.0    2.3  1  Ribosomal_L29    Ribosomal L29 protein
       0.12   12.6   0.1       0.44   10.8   0.1    1.9  1  HTH_34           Winged helix DNA-binding domain


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.3     1e-06    0.0036       1      45 [.     723     771 ..     723     772 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1e-06
                      CSSSBHHHHHHHHHHHHHHTTCHHHHHHHHTS....S-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgkWteeEdelLleavkkhGnrWkkIaerlgg....Rtekqcrsrwrny 45 
                      r +W+  ++elLl++++k+G +W++ ++ + g    R   + +++ rn+
       KHJ31612.1 723 RVPWSHNDEELLLNGIEKYGCSWSSLLNIIRGweyeRDQVALKDKARNM 771
                      689*********************9988777555567777777777775 PP

>> HTH_5  Bacterial regulatory protein, arsR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.2   7.7e-06     0.028      15      41 ..     161     187 ..     157     188 .. 0.93

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 7.7e-06
                 SEEHHHHHHHHTS-HHHHHHHHHHHHH CS
       HTH_5  15 elcvcelaeelglsqstvShHLkkLre 41 
                 e +v +++ el+l+ s +S  Lk L+ 
  KHJ31612.1 161 EEKVNQISQELKLTDSLLSKSLKTLES 187
                 689**********************85 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.31   1.1e+03      16      43 ..     156     193 ..     138     207 .. 0.66
   2 ?   11.0   0.1   0.00011      0.38       1      38 [.     726     767 ..     726     780 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.31
  Myb_DNA-bind_6  16 ygn....dWknIaealn......rRtpkqcfdrwknkL 43 
                     y++    + ++I+++l+       ++ k++   ++++L
      KHJ31612.1 156 YEDipeeKVNQISQELKltdsllSKSLKTLESQFHSVL 193
                     32244448899****99888888888888888887755 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00011
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealn....rRtpkqcfdr 38 
                     W++ ++e+Ll++ ekyg  W++  +++      R++ +++d+
      KHJ31612.1 726 WSHNDEELLLNGIEKYGCSWSSLLNIIRgweyERDQVALKDK 767
                     **********************99999448888888777777 PP

>> Ribosomal_L29  Ribosomal L29 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   8.1e-05      0.29      26      54 ..     774     803 ..     760     804 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.1e-05
                    HHHHHHTSSS.-CHHHHHHHHHHHHHHHHH CS
  Ribosomal_L29  26 rfqkatgqle.npsrirkvRkdIARikTvl 54 
                     f ka  +l  n ++ir  +k++A +kTvl
     KHJ31612.1 774 SFLKAGVPLPkNFHKIRLGKKEVASVKTVL 803
                    55666557755******************8 PP

>> HTH_34  Winged helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   0.00012      0.44      16      40 ..     163     187 ..     156     190 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00012
      HTH_34  16 dfvelkealeatdgnLsvhlkkLek 40 
                 + ++++++l++td+ Ls+ lk+Le+
  KHJ31612.1 163 KVNQISQELKLTDSLLSKSLKTLES 187
                 5789*******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (811 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1177  (0.0656478); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.41
# Mc/sec: 5878.82
//
Query:       KHJ31613.1  [L=337]
Description: putative vacuolar protein sorting-associated protein 62 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-15   55.4   0.3    5.9e-15   54.6   0.3    1.4  1  Vps62     Vacuolar protein sorting-associated protein 62


Domain annotation for each model (and alignments):
>> Vps62  Vacuolar protein sorting-associated protein 62
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.6   0.3   3.3e-19   5.9e-15     238     431 ..      31     222 ..      19     285 .. 0.78

  Alignments for each domain:
  == domain 1  score: 54.6 bits;  conditional E-value: 3.3e-19
       Vps62 238 qikalikaygptvyfhpdeeylpssvsWffknGallykkgee.kgeeidaeG.snlPq..ggsnDgeyWldlpvdek.....arekvkkGdlesaklyv 327
                 q+  ++k ++p+v++  +e+y+ps +  +++n   ++ k+    + +i+ e    l q  ++ n+    l  p++++       +  ++G   +a+  v
  KHJ31613.1  31 QLPQFVKDFAPLVFLDKNEKYFPSDIGKHLENTTPFIDKTAIdPAPSIAVENlDSLNQyiNEVNNVYLTLKEPIENDpaflqGTQPNENGKTVDATSCV 129
                 788899****************************9999988733344554431345441155555555555666654212113456678999999**** PP

       Vps62 328 hvkpalGgtftDiavWvfyPfnGpaklkvgllnlplgkiGehvgdWehvtlrisnfsgeLlsvyfsqhsgGewvdasdlefieggnkavvyssknghas 426
                  +    G  + D     fy fn           +  +++G+hvgdWeh+ +r  n  g   ++++sqhs+G+   ++d+   + g++++vys++  ha 
  KHJ31613.1 130 VIVTDHGDGIIDAFYMYFYSFNQGNV-------VLSQELGDHVGDWEHTMVRFKN--GAPDALWLSQHSSGQAF-SYDIMKKK-GDRPIVYSARGTHAN 217
                 ************99999*****6432.......223679*************998..777899********987.57777778.5************** PP

       Vps62 427 ypkpg 431
                 y+  g
  KHJ31613.1 218 YAIEG 222
                 *9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2352.28
//
Query:       KHJ31614.1  [L=338]
Description: putative vacuolar protein sorting-associated protein 62 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.2e-12   44.2   0.0    5.3e-09   34.9   0.0    2.2  2  Vps62          Vacuolar protein sorting-associated protein 62
  ------ inclusion threshold ------
      0.064   13.2   0.1       0.11   12.4   0.1    1.3  1  Thioredoxin_6  Thioredoxin-like domain


Domain annotation for each model (and alignments):
>> Vps62  Vacuolar protein sorting-associated protein 62
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0   0.00016       1.5     236     269 ..      30      63 ..      20      98 .. 0.86
   2 !   34.9   0.0   5.9e-13   5.3e-09     365     431 ..     161     223 ..     151     252 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.00016
       Vps62 236 leqikalikaygptvyfhpdeeylpssvsWffkn 269
                  eqi  ++k ++p+v++  +e+++ps ++ +++ 
  KHJ31614.1  30 AEQIPKFVKDFAPLVFLDKEERHFPSDIATHLEK 63 
                 68************************99877765 PP

  == domain 2  score: 34.9 bits;  conditional E-value: 5.9e-13
       Vps62 365 kiGehvgdWehvtlrisnfsgeLlsvyfsqhsgGewvdasdlefieggnkavvyssknghasypkpg 431
                 ++G+h++dWehv +r  n s    ++++sqh+ G+    + ++ +  g++++v+s++  ha+y++ g
  KHJ31614.1 161 ELGDHIADWEHVMVRFKNGSP--EALWLSQHARGQAFTYKAMKKQ--GDRPIVFSARGTHALYSTDG 223
                 68**************98655..589*********9999888754..59**************9987 PP

>> Thioredoxin_6  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   1.2e-05      0.11      51     104 ..      47     101 ..      34     122 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.2e-05
                    TTEEEEEETH.T--HHHHHHHHHHH---SEEE-SHHHHHHHHTSS--EEEEEEE- CS
  Thioredoxin_6  51 deekvkydge.kitvddlkkfieknslplvreltpenaeelfeeglppllllflk 104
                    d+e+++++ +  ++ ++ + f++k++l++ ++++ +n++ l + + +++ ++++ 
     KHJ31614.1  47 DKEERHFPSDiATHLEKTTPFVDKKILEPTPKISIDNLDSLNQFNNNTARIFLTS 101
                    466789*****9*****************************99997766666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2586.16
//
Query:       KHJ31615.1  [L=689]
Description: putative abc1 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-21   75.8   0.0    6.8e-21   74.6   0.0    1.6  1  ABC1      ABC1 family


Domain annotation for each model (and alignments):
>> ABC1  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.6   0.0   3.8e-25   6.8e-21      15     119 .]     246     351 ..     243     351 .. 0.93

  Alignments for each domain:
  == domain 1  score: 74.6 bits;  conditional E-value: 3.8e-25
        ABC1  15 deePiAaASiaqVhrAklksgeeVavKvqrpgvkkriksDlellkllakllkkflkelrldleelvdefskslleEldferEAknaekfrenfaklk.. 111
                 + ++ A+AS+aqVh A+lk+g eVa+K+q+ ++++++ +Dl  ++++ k+++ ++ +l   l++lv  +s++l+ E df++E  naek+++ +a+ +  
  KHJ31615.1 246 ETRARASASVAQVHWARLKDGTEVAIKIQKREIARQVGWDLWAFNIVTKVYSFWF-DLP--LDKLVPYISERLQLETDFRNEMINAEKMKDLIASEPrl 341
                 56678********************************************877665.566..9*********************************9988 PP

        ABC1 112 ..evkvPkvy 119
                   +v++Pk+y
  KHJ31615.1 342 rdRVYIPKIY 351
                 8779****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (689 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       345  (0.0192426); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4803.42
//
Query:       KHJ31616.1  [L=607]
Description: putative atp-dependent rna helicase ded1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.6e-42  143.7   0.0    6.8e-42  143.2   0.0    1.2  1  DEAD        DEAD/DEAH box helicase
    9.5e-27   93.5   0.0    6.9e-26   90.8   0.0    2.5  4  Helicase_C  Helicase conserved C-terminal domain
     0.0036   16.1   0.0     0.0044   15.8   0.0    1.1  1  SNF2_N      SNF2 family N-terminal domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.2   0.0   1.1e-45   6.8e-42       1     174 [.     156     346 ..     156     348 .. 0.88

  Alignments for each domain:
  == domain 1  score: 143.2 bits;  conditional E-value: 1.1e-45
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS....TTSTS...................-EEEEEESSHHHHHHHHHHHHHHTTTSTS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxx...................xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet....kgktg...................pkalivePtreLaeqtlnnlkkfkkyidl 76 
                 t+iQ+ ++p++ +g dv+++a+TGsGKT+aflip l++++ +        +                   p + iv+P+reLa q+++++++f+    l
  KHJ31616.1 156 TPIQQYCLPAVFKGYDVVACAQTGSGKTAAFLIPTLSKLMGKakklC---AprpnpakfqqgvtdpvraePLICIVVPSRELATQIFDEARRFCYRSML 251
                 89*************************************87565550...15555555555666666666*************************999* PP

                 EEEEEETTSSHHHHHHHHHTTCSEEEEEHHHHHHHHHCTS.SHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  77 rvlliiggvaardqlskldngvdivvgtpgrlddllstgk.lnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvk 174
                 r ++++gg + r+q+++l++g+d+++gtpgrl+d++++ + l+l++++++++DEad++   + +d++++i+   +q + + +     +++SAT+pk+ +
  KHJ31616.1 252 RPCVVYGGGPIREQINQLQKGCDVLIGTPGRLVDFINRPHiLTLKRLKYMIIDEADEIVGANWEDQMKTIMGGGDQEEGNIN----YLMFSATFPKQAR 346
                 **********************************998777588*******************************76665555....*********7765 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.8   1.1e+04      77      88 ..     107     118 ..     103     119 .. 0.84
   2 ?   -1.8   0.0      0.67     4e+03      20      73 ..     226     279 ..     220     280 .. 0.57
   3 ?   -2.7   0.0       1.3   7.6e+03      99     111 .]     354     366 ..     326     366 .. 0.73
   4 !   90.8   0.0   1.2e-29   6.9e-26       5     111 .]     387     496 ..     383     496 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.8
                 TSSSTSTTESEE CS
  Helicase_C  77 erGidipkvnlV 88 
                   Gid++k++++
  KHJ31616.1 107 KSGIDFQKLSTI 118
                 57*****99875 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.67
                 EEEESSHHHHHH....HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEES CS
  Helicase_C  20 lifvntidrlek....vklllekkgikvavlhgelpqnereeileqfnkgesdvLiat 73 
                  i+v++++ + +    ++ ++ ++ ++ +v++g  p +e++  l++     +dvLi t
  KHJ31616.1 226 CIVVPSRELATQifdeARRFCYRSMLRPCVVYGGGPIREQINQLQKG----CDVLIGT 279
                 56666666443222233444444467777888877777766655554....6777766 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1.3
                 HHHHHHTTSSSTT CS
  Helicase_C  99 syiqriGRtgRag 111
                  +++ + R+gRag
  KHJ31616.1 354 AMNHLRIRVGRAG 366
                 5677888888876 PP

  == domain 4  score: 90.8 bits;  conditional E-value: 1.2e-29
                 HHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSS....HHH CS
  Helicase_C   5 allellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprn....vts 99 
                 al ++l l+    +++ifvn+++++++++ +l ++++ ++ +h++ +q+ere+++++f+ g++ +Liat v +rG+di +v  Vinfdlp +    +++
  KHJ31616.1 387 ALQQYL-LSMPPARTIIFVNSRRSADELDDFLFNSAFPCTSIHSDRTQREREDSIRAFRTGKTPILIATGVSARGLDIHNVMAVINFDLPSSnyggIEE 484
                 566666.788999**********9999888888999******************************************************5544457** PP

                 HHHHHTTSSSTT CS
  Helicase_C 100 yiqriGRtgRag 111
                 y +riGRtgR+g
  KHJ31616.1 485 YCHRIGRTGRIG 496
                 **********97 PP

>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   7.4e-07    0.0044      98     189 ..     204     309 ..      35     321 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 7.4e-07
                 -....................EEEE--H.HHHHHHHHHHHHH-TTS-EEE--SSHHHH-----------------EEEE-HHHHHHHT......TTS-S CS
                 x....................xxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  98 p....................tLivvPa.slldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydvvittYdvlsreaelqkkrsvlkq 175
                 p                    + ivvP+ +l++q  +e +r++ +s lr +v  g+       +++ ++l++  dv+i t  +l    ++ ++++ l+ 
  KHJ31616.1 204 PrpnpakfqqgvtdpvraeplICIVVPSrELATQIFDEARRFCYRSMLRPCVVYGGG----PIREQINQLQKGCDVLIGTPGRLV---DFINRPHILTL 295
                 122333333334444555555679*************************98887765....44677999**************99...6779******* PP

                 -S-SEEEES-GGGT CS
                 xxxxxxxxxxxxxx RF
      SNF2_N 176 vewkrvvlDEghtl 189
                 ++ k++++DE+  +
  KHJ31616.1 296 KRLKYMIIDEADEI 309
                 ***********875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (607 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 4318.27
//
Query:       KHJ31617.1  [L=297]
Description: hypothetical protein EV44_g3582 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-08   34.3   0.1    2.3e-06   27.8   0.1    2.4  1  RNase_H   RNase H


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.1   1.3e-10   2.3e-06       5     139 ..     171     290 ..     168     293 .. 0.71

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 1.3e-10
                 EEEEEEEEECTTTCEEEEE.EECTT..EEEEEEEC..CCCHHHHHHHHHHHHHHHTT.SC...SEEEEEES-HHHHHHHHCCCHHHHHTTSSSETTSSB CS
     RNase_H   5 vvYtDGsclgnpgeggaga.vlykegarnisaple..eaqtnnraELsAvieaLkalksd...ekvniytDSkYvvkgitqwvhrwkknawkttseqkp 97 
                 ++YtDGs  +n+ +++  +  +++   +++s +++     +   aE  A+ + +k+ ++    ++ +i++DS+  ++   ++ h+          +   
  KHJ31617.1 171 IIYTDGSHAQNNTSSKCIVlYTPFT-RQMVSLSYNlgRSMSICDAETYAILKEIKKTTTYgpdHSWHIFSDSQASLH---RIGHT---------PNM-- 254
                 79*****998877765544244555.4466677776588999*************654445667888*****65544...43332.........222.. PP

                 HTTHHHHHHHHHCHCSSEEEEEE-SCCSSSTHHHHHHHHHHH CS
     RNase_H  98 vknkdlaellkelakkkkvqlkwvkgHaGvpkgNemaDrlAk 139
                 +      ++ ke+++ k+++l w++gH ++ +gN  aD+lAk
  KHJ31617.1 255 ICH----QIRKECFR-KNINLYWCPGHMNI-EGNDLADNLAK 290
                 222....33334455.89************.7*********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2296.76
//
Query:       KHJ31618.1  [L=1155]
Description: putative sh3 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-09   36.5   0.1    6.9e-09   35.2   0.1    1.8  1  SH3_1     SH3 domain
    2.7e-09   36.7   0.1    8.6e-09   35.1   0.0    1.9  2  SH3_9     Variant SH3 domain
    3.9e-08   32.8   0.1    7.8e-08   31.9   0.1    1.5  1  SH3_2     Variant SH3 domain


Domain annotation for each model (and alignments):
>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.1   1.1e-12   6.9e-09       1      47 [.       9      58 ..       9      59 .. 0.97

  Alignments for each domain:
  == domain 1  score: 35.2 bits;  conditional E-value: 1.1e-12
                EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTS...TEEEEEE CS
       SH3_1  1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgt...gkeGliP 47
                +A+++Y  +++d+L f  G +i v ++++d+W+ g+  +    +++G++P
  KHJ31618.1  9 KAIFEYVSQHDDDLHFPIGQIINVTNEEDDEWYSGEFVDEsgiKHQGIFP 58
                7*************************************9999999****9 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   0.0   1.4e-12   8.6e-09       1      49 []      10      63 ..      10      63 .. 0.93
   2 ?   -2.6   0.0      0.87   5.2e+03      15      24 ..    1060    1069 ..    1059    1071 .. 0.83

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 1.4e-12
       SH3_9  1 AlypyepreddeLsLqrGDvitvieesedgWlegs..l.tG..rtGlvPanyve 49
                A++ y+ ++dd L+++ G++i v +e++d W+ g+    +G  + G +P+n+ve
  KHJ31618.1 10 AIFEYVSQHDDDLHFPIGQIINVTNEEDDEWYSGEfvDeSGikHQGIFPKNFVE 63
                89*********************************65357799*********97 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.87
       SH3_9   15 LqrGDvitvi 24  
                  +++GD+it+ 
  KHJ31618.1 1060 IRPGDIITLR 1069
                  799*****85 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.1   1.3e-11   7.8e-08       2      55 ..       8      63 ..       7      65 .. 0.94

  Alignments for each domain:
  == domain 1  score: 31.9 bits;  conditional E-value: 1.3e-11
                EEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE.C....CCEEEEEGCGEE CS
       SH3_2  2 vraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev.g....GrvGlfPsslve 55
                v+ai++yv++  + L+f  G++i v+   ++++d+w+ ge  +    +++G+fP ++ve
  KHJ31618.1  8 VKAIFEYVSQHDDDLHFPIGQIINVT---NEEDDEWYSGEFvDesgiKHQGIFPKNFVE 63
                8*************************...**********99756888999*******97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1155 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1105  (0.061632); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.82u 0.31s 00:00:01.12 Elapsed: 00:00:00.46
# Mc/sec: 7525.32
//
Query:       KHJ31619.1  [L=268]
Description: putative duf408 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-23   81.5   0.3    8.6e-23   80.5   0.3    1.6  1  RPAP2_Rtr1  Rtr1/RPAP2 family


Domain annotation for each model (and alignments):
>> RPAP2_Rtr1  Rtr1/RPAP2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.5   0.3   4.8e-27   8.6e-23       2      74 ..      82     158 ..      81     159 .. 0.96

  Alignments for each domain:
  == domain 1  score: 80.5 bits;  conditional E-value: 4.8e-27
                 G--HHHHHHHHHHHHCTT--SSTT--S--SS-----------..........--TTGGGGT-SSHHHHHHHHHHHHCS CS
  RPAP2_Rtr1   2 llspsdyddvveERniekkCGyplCnnsleedkrqkekyris.....rkakkvvereelekfCSkaCaerslavraqL 74 
                  ++psdyd+++eERni+++CGy+lC+n+++++  + +kyr++     +k ++vve+e lek+CS++Ca r+++v+ qL
  KHJ31619.1  82 SFQPSDYDSLIEERNINDRCGYALCPNRRHKEV-GGGKYRLQgtsgkAKYFRVVEKEALEKWCSNTCALRAMYVKIQL 158
                 59***************************9999.*********99999999**************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       798  (0.0445089); expected 358.6 (0.02)
Passed bias filter:                      591  (0.0329634); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2016.67
//
Query:       KHJ31620.1  [L=178]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.012   14.3   1.0      0.014   14.1   1.0    1.0  1  Ndc1_Nup  Nucleoporin protein Ndc1-Nup


Domain annotation for each model (and alignments):
>> Ndc1_Nup  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   1.0   7.7e-07     0.014     324     456 ..      25     141 ..      19     175 .. 0.51

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 7.7e-07
    Ndc1_Nup 324 idrkggstWsqilkeClklikeltqrinergqpapkaapskapknkasapvkelprlsksplkkkddeifgnsltaeaspkssssskegvekalsslak 422
                 ++r +  +W++ l +C+++i+++ ++++++++  +ka +    k+  s+++++      sp+     +if      ++ pk+s    + ve +l +   
  KHJ31620.1  25 RQRRE-RVWHARLTICTSVISSIDSTLENYKDDISKAES-ASFKTYLSQAISKFTAYDHSPSP---PPIFS-----HTRPKKS---GGPVEHKLPNRPI 110
                 56767.8*************************3333333.22333444444444444333322...46888.....2222222...2223333222222 PP

    Ndc1_Nup 423 spgqspsptarlsprarkllekaksrllskeqke 456
                 s     +p +  + ++ + le +++r + +e+++
  KHJ31620.1 111 SV---VTPFKVTTISSGEILEIDRTRNMPQEKQS 141
                 22...23333333333333333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1347.38
//
Query:       KHJ31621.1  [L=915]
Description: putative telomere silencing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-28   98.6   1.1    2.1e-28   97.8   1.1    1.4  1  Zds_C     Activator of mitotic machinery Cdc14 phosphatase ac
  ------ inclusion threshold ------
        5.9    6.9   9.0        2.1    8.4   5.6    2.0  2  DUF1676   Protein of unknown function (DUF1676)


Domain annotation for each model (and alignments):
>> Zds_C  Activator of mitotic machinery Cdc14 phosphatase activation C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.8   1.1   2.3e-32   2.1e-28       1      52 []     729     780 ..     729     780 .. 0.98

  Alignments for each domain:
  == domain 1  score: 97.8 bits;  conditional E-value: 2.3e-32
       Zds_C   1 vpdvvmydtRfpihvERaiYRlsHlKLanprRpLreQVLlSNfMYsYLnlvn 52 
                 +pdv++++tRf i  ERaiYR++H+KLanp+R+L++QVLlSNfMYsYL++v+
  KHJ31621.1 729 KPDVDYNWTRFSILEERAIYRMAHIKLANPHRALYSQVLLSNFMYSYLAKVQ 780
                 59************************************************97 PP

>> DUF1676  Protein of unknown function (DUF1676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   5.6   0.00023       2.1      18     122 ..     562     690 ..     558     705 .. 0.77
   2 ?   -3.0   0.1      0.74   6.6e+03      90     105 ..     791     806 ..     769     831 .. 0.56

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00023
     DUF1676  18 fldrlldkdeielvdgvslvrneeaasassk..................eeeeelsreeeeare.eelekllleklerflkshslevklpeeldaegae 97 
                 ++d   ++d+++++  + +++++++++++++                  e++e+++++++e+re ++ +k  +ek+ +  +   l+++l++ + + +++
  KHJ31621.1 562 LVDGNSRTDSLTFIPTLDVKKSDKKSKKEKDdseshvlkktswswfkggEDKEKKEKKKDEEREgKKNKKVSMEKIHDNARLDVLQLTLENGAANGRES 660
                 5667788999999********888877666699****************55666666666666669**************************8878788 PP

     DUF1676  98 esisrsleedne......egRkkk.kkkkklk 122
                   i r+++e  +      e+R  k  ++kk k
  KHJ31621.1 661 IVIDRDNLEPRSqdekrkEAR--KfSTEKKEK 690
                 888777776666786667777..333333333 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.74
     DUF1676  90 eldaegaeesisrsle 105
                 +++++++e ++ ++++
  KHJ31621.1 791 SAQQKKQEMERRQREQ 806
                 3222222111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (915 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1815  (0.101233); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.25s 00:00:00.96 Elapsed: 00:00:00.39
# Mc/sec: 6979.94
//
Query:       KHJ31622.1  [L=183]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       301  (0.0167884); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.43
# Mc/sec: 1279.46
//
Query:       KHJ31623.1  [L=1023]
Description: putative 116 kda u5 small nuclear ribonucleoprotein component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.4e-47  160.5   0.0    4.9e-47  160.0   0.0    1.2  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    3.5e-37  127.7   9.5    7.4e-37  126.7   9.5    1.6  1  EFTUD2       116 kDa U5 small nuclear ribonucleoprotein compo
    1.6e-20   73.1   0.0      4e-20   71.8   0.0    1.7  1  EFG_IV       Elongation factor G, domain IV
    8.1e-19   67.4   0.0    2.2e-18   66.0   0.0    1.8  1  EFG_C        Elongation factor G C-terminus
    1.2e-11   44.8   0.0    2.5e-11   43.8   0.0    1.5  1  GTP_EFTU_D2  Elongation factor Tu domain 2
    6.9e-07   29.3   0.0    1.5e-06   28.2   0.0    1.6  1  EFG_II       Elongation Factor G, domain II
    1.4e-05   25.2   0.1    2.8e-05   24.2   0.1    1.6  1  MMR_HSR1     50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.083   12.4   0.6        3.8    7.0   0.6    2.4  2  FeoB_N       Ferrous iron transport protein B
      0.093   12.3   0.0       0.22   11.1   0.0    1.6  1  Ras          Ras family


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.0   0.0   2.4e-50   4.9e-47       2     193 ..     132     459 ..     131     460 .. 0.81

  Alignments for each domain:
  == domain 1  score: 160.0 bits;  conditional E-value: 2.4e-50
                 CEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHH......HHHSTHCHSHHHHHHTSCSSCEEEEEE...TTCSSEEEEEEEESSSGGGHHHHHHHH CS
    GTP_EFTU   2 rirnigiighvDhGKtTLtdrLlyktgaiskkgeka......eeervlDtlkeErergiTiksaaisle...ketkkylinliDtPGHvdFskevirgl 91 
                 +irni+++gh++hGKtTL+d L+++t++ + +  k+      e+ r+ D++  Erergi++k++ ++l    ++ k+yl+n++DtPGHv+F++ev  +l
  KHJ31623.1 132 QIRNIALAGHLHHGKTTLMDMLVMETHDLAGRLDKKigkrrdENLRYSDSHILERERGISVKASPMTLVlhsTKDKSYLFNILDTPGHVNFVDEVACSL 230
                 79**************************9998888876555433566**********************976599************************ PP

                 HT-SEEEEEEETTTBSTHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT...........TTEEEEEEBTTTTB CS
    GTP_EFTU  92 rvlDgavlvvdaveGvepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqklsrkeeklekygekge...........kevpvvfgSalkge 179
                 r +Dg+vlvvd+veGv+ +te+++++ l eg+p+i+++NKmDrl+ elk  +++++ kl+++ e+++ + e++            ++ +v+f+++  g+
  KHJ31623.1 231 RLVDGVVLVVDVVEGVQINTEQIIKHTLLEGLPLILVVNKMDRLILELKLPPNDAYFKLKHVIEEVNTVIENTLpgqgekqrlspEKGNVMFACCSMGW 329
                 ********************************************************999888666666655544667777778888999********** PP

                 THH................................................................................................ CS
    GTP_EFTU 180 gvk................................................................................................ 182
                 +++                                                                                                
  KHJ31623.1 330 CFTlqsfakmyadsfypkdnsssginvhefakrlwgdiffnpqkrtftrkgleerskrsfvnfilepiyklyshtisdspedlkhilatlgitlkpsqy 428
                 998777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 PP

                 ....................HHHHHHHHHSH CS
    GTP_EFTU 183 ....................tllealvellp 193
                                      +++++++++p
  KHJ31623.1 429 ktdakvllklicgqffgpssGFVDMIIDHVP 459
                 7777766666666666666556666666666 PP

>> EFTUD2  116 kDa U5 small nuclear ribonucleoprotein component N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.7   9.5   3.7e-40   7.4e-37       1     122 []       2     114 ..       2     114 .. 0.80

  Alignments for each domain:
  == domain 1  score: 126.7 bits;  conditional E-value: 3.7e-40
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX............XXXXXXXXXXXXXX----TTT---S--TTTTT-SSSEEEE--S-SS CS
      EFTUD2   1 ddlYDEFGNyiGpelesdeeeeseeeeeeeeeeeeeeeeeeeaekaeedeelkdeeeeeeaeeeesnavvlhedkkyypsaeevYGkdvetlvqeeDaq 99 
                 dd YDEFGN+iG+ ++sd+e+ ++ ++++   +++++ee+       ed+ ++  e ++   + +snav+lhedk+yyp+a++vYG+dvetlvqeeDaq
  KHJ31623.1   2 DDQYDEFGNFIGEAEDSDDESLNNIDANAYIYDKDDAEETL------EDAGHELMEVDD---DGPSNAVILHEDKQYYPTAQQVYGEDVETLVQEEDAQ 91 
                 699*********99999999766666666555544444444......233222222222...2379********************************* PP

                 -TTS-SS--------B---SS-- CS
      EFTUD2 100 plsePiiaPvkekkfeveekdlp 122
                 pl++Pii+P+++kkf+++e+dlp
  KHJ31623.1  92 PLTQPIIKPLENKKFAIQETDLP 114
                 *********************97 PP

>> EFG_IV  Elongation factor G, domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.8   0.0     2e-23     4e-20       4     119 ..     728     844 ..     725     846 .. 0.90

  Alignments for each domain:
  == domain 1  score: 71.8 bits;  conditional E-value: 2e-23
                 ESCEE.SS-CCHCCCCCCCHTSSSHCCCCCEEEECCTTTTSSEEEEE--S....TCCCHCCCCHHHHCCCCCCTTS-TTTS--EESEEEEEEEEE--T. CS
      EFG_IV   4 ayrEtirkpvkereeklkkqsggdgqyakvileiePleegsgnefvdetk....ggqvpkeyieavekGfqealkeGplagepvtdvkvtLldgslhe. 97 
                 +++         + +++ +++g+d  +++ i++++P+e  + n++ d+t     +++++  + +++ +Gf +a++eGpl++ep+++ k++++d+sl + 
  KHJ31623.1 728 SIK----SSNRIIGKFFENNYGWDLLASRSIWAFGPDE-IGPNILQDDTLptevDKKLLMTVRDTICQGFSWATREGPLCEEPIRNTKFKIMDVSLASe 821
                 445....55555778999******************87.99********8777788889999999*********************************9 PP

                 .TTC-HHHHHHHHCHHHHHHHHC CS
      EFG_IV  98 .vdsseaafkpaarralkeallk 119
                  + +++++++p+arra+++++l+
  KHJ31623.1 822 aIFRGGGQIIPTARRACYSSFLM 844
                 *******************9986 PP

>> EFG_C  Elongation factor G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.0   0.0   1.1e-21   2.2e-18       1      88 [.     848     936 ..     848     937 .. 0.97

  Alignments for each domain:
  == domain 1  score: 66.0 bits;  conditional E-value: 1.1e-21
                 EEEEEEEEEEEEEECCCCCCHHHHHHHCT-EEEEEEEE..TTEEEEEEEEEGGG-TTHHHCHHHCTTTS-EEEEEEEEEEE--HHHHHH CS
       EFG_C   1 vllEPivkveievpeeyvgkvisdlssrrGeiedmeqd.asgrviieaeiPlaeligfateLrslTkGegsfsmefsgYeevpgdklde 88 
                 +llEPi+++ ++ p + v   ++ ls+rrG++++  ++ ++   ++++ iP+ +++gf+t+Lr  T+G++++s+ f+++  vpgd+ld+
  KHJ31623.1 848 RLLEPIYSCSMTGPADSVTSLYTVLSRRRGHVLSDGPIgGTPLYRVNGLIPVIDSFGFETDLRIHTQGQANVSLVFDRWNIVPGDPLDR 936
                 59************************************8899*******************************************9885 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.8   0.0   1.3e-14   2.5e-11       4      73 ..     512     585 ..     510     586 .. 0.98

  Alignments for each domain:
  == domain 1  score: 43.8 bits;  conditional E-value: 1.3e-14
                  EEEEEEESEEETTEEEEEEC.TCTTSEE...EEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCEE CS
  GTP_EFTU_D2   4 algrvysGtlkkGdevrilg.ndtskke...ivtrissletfhededeavaganaGvivaikgledaiivGdtl 73 
                  ++grv+sGt ++G++vr+lg +++ ++e     ++is ++ ++ ++d++ +g++aG+++++ g++++i++++tl
   KHJ31623.1 512 SFGRVMSGTARPGMQVRVLGeSYSIEDEeemTFETISNVYISESRYDILTEGVPAGNWALLEGVDNSIVKSATL 585
                  69***********************************************************************9 PP

>> EFG_II  Elongation Factor G, domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   0.0   7.7e-10   1.5e-06       1      69 [.     605     672 ..     605     677 .. 0.93

  Alignments for each domain:
  == domain 1  score: 28.2 bits;  conditional E-value: 7.7e-10
      EFG_II   1 fPePvislaiepkskadedklskaLarlleEDptlrverdeeTketilsGmGelHleivverlkreykv 69 
                 f e+++++a+ep + ++  k+ + L+++ +  p +++++ ee++e i+ G Gel ++ v+  l++ y v
  KHJ31623.1 605 FTESIFKVAVEPINPSELPKMLDGLRKINKSYPLITTKV-EESGEHIILGTGELYMDCVLHDLRKLYAV 672
                 67899****************************998877.79**********************99987 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.1   1.4e-08   2.8e-05       1     114 []     135     270 ..     135     270 .. 0.75

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1.4e-08
                 EEEEEESTTSSHHHHHHHHHTS....TEEESSSTTSSSSEEEEEEE...ETTEE.........................EEEEECGGCSSHHHHHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge....kaivsdkpgtTrdinegrvk...lkgke.........................ielvDtpGliegaseekglg 67 
                 ++a++G+   GK+tL+  l+ e    + +  +k g+ rd n +  +   l   e                         ++++DtpG ++       + 
  KHJ31623.1 135 NIALAGHLHHGKTTLMDMLVMEthdlAGRLDKKIGKRRDENLRYSDshiL---ErergisvkaspmtlvlhstkdksylFNILDTPGHVN------FVD 224
                 589****************9765554458889999999999887663331...13456667777788888888888888********555......455 PP

                 HHHHHHHCTSEEEEEEETTTTCSHHHHHHHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  68 kaflaleeadlillvvdaseeklkpldeeleelleeakkplilvlnk 114
                 +  ++l+ +d ++lvvd+  e+++ + e++ +    ++ plilv+nk
  KHJ31623.1 225 EVACSLRLVDGVVLVVDVV-EGVQINTEQIIKHTLLEGLPLILVVNK 270
                 555555559********88.6677777777777656899*******8 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.045        89       2      23 ..     135     156 ..     134     163 .. 0.86
   2 ?    7.0   0.6    0.0019       3.8      45     118 ..     207     274 ..     191     278 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.045
                 EEEEEESTTSSHHHHHHHHHTT CS
      FeoB_N   2 tvalvGnpnvGkttlfnaltga 23 
                 ++al+G    Gkttl++ l   
  KHJ31623.1 135 NIALAGHLHHGKTTLMDMLVME 156
                 69**************999765 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0019
                 TTEEEEEEE----SSSSSSSHHHHHHHHHHHCTSSSEEEEEEEGGGHHHHHHHHHHHHHTTSSEEEEEETHHHH CS
      FeoB_N  45 kgkeveivDlPGiYslsayseeekvardflleeepdvvvnvvdatnlernLyLtlqllelgvpvvlalnmidea 118
                 k++ ++i+D PG  ++      ++va+++ l + + +vv+vv+  +++ + ++   lle g+p++l++n++d +
  KHJ31623.1 207 KSYLFNILDTPGHVNFV-----DEVACSLRLVDGVVLVVDVVEGVQINTEQIIKHTLLE-GLPLILVVNKMDRL 274
                 55678889999976554.....56777777788999******************99999.9***********75 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00011      0.22      43     115 ..     204     272 ..     179     299 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00011
                 ETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHHHST.TTSEEEEEEETTT CS
         Ras  43 vdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikrvae.envpivLvGnKvD 115
                 +++k++ ++i+DT G  +f      ++r ++g++lv d+ +      v+  +e+i +++  e +p++Lv nK+D
  KHJ31623.1 204 TKDKSYLFNILDTPGHVNFVDEVACSLRLVDGVVLVVDVVE-----GVQINTEQIIKHTLlEGLPLILVVNKMD 272
                 569999*********************************86.....56656666666666699**********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1023 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.70u 0.27s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 7103.22
//
Query:       KHJ31624.1  [L=699]
Description: putative acyl- oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-45  154.0   0.2    7.9e-45  152.6   0.2    1.6  1  ACOX           Acyl-CoA oxidase
    1.2e-24   87.2   0.1    2.8e-24   86.1   0.1    1.7  1  Acyl-CoA_ox_N  Acyl-coenzyme A oxidase N-terminal
    7.2e-11   42.2   0.0    1.8e-10   40.9   0.0    1.7  1  Acyl-CoA_dh_M  Acyl-CoA dehydrogenase, middle domain
    1.4e-06   28.6   0.3     0.0018   18.5   0.0    2.7  3  Acyl-CoA_dh_1  Acyl-CoA dehydrogenase, C-terminal domain


Domain annotation for each model (and alignments):
>> ACOX  Acyl-CoA oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.6   0.2   1.8e-48   7.9e-45       4     166 ..     513     676 ..     511     687 .. 0.93

  Alignments for each domain:
  == domain 1  score: 152.6 bits;  conditional E-value: 1.8e-48
                 HHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTC......SSTTCHHHHHHHHHHHHHHHHHHTHHHHH CS
        ACOX   4 vllealevraarllkeaakkleeekksgkskeeawneqsvelvsaakahaelvvlksfvekles......lseelkevLkkLckLyalstiekhlgdfl 96 
                 ++++a+++r+a+l+ ea k+ + ek       ++wn++ v+++++++ah +++v+k+f+e l+s      l++++  vL+ +++L+al+t+e+++++f+
  KHJ31624.1 513 DIVAAFAWRTAYLTFEALKHRDVEK-------KSWNSLLVDFWRLSTAHSQYLVVKNFYEVLQStsieyeLDQNTLIVLHAVFRLFALHTLEREASEFF 604
                 789****************996654.......89****************************66667788999************************** PP

                 HTTSS-HHHHHHHH.HHHHHHHHHHHGCHHHHHHTT---HHHH--CCC-TT--HHHHHHHHHHH.SGGCCSS CS
        ACOX  97 esgylspdqldllr.eailellkelrpnavaLvDafdfsDfiLnSaLGryDGdvYenlfeeakk.nplnkte 166
                 +sg ++ +q++l r +a+ +ll+ +rp+a+ LvD+++f+D++L+S+LGryDG+vYe++f++a + npln   
  KHJ31624.1 605 SSGAVTIRQIQLTRaKAVIQLLEHIRPHAIKLVDSWQFPDWQLDSSLGRYDGNVYEDMFHRASElNPLNCLI 676
                 *********************************************************************654 PP

>> Acyl-CoA_ox_N  Acyl-coenzyme A oxidase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.1   0.1   6.2e-28   2.8e-24      12     125 .]      43     146 ..      32     146 .. 0.92

  Alignments for each domain:
  == domain 1  score: 86.1 bits;  conditional E-value: 6.2e-28
                    SHHHHHHHHHHHHHHCT-GGGS-SSTGGGS-HHHHHHHHHHHHHHHHHHHHHTTSBTTCHHHHHHHH..HHHHTHSS--TTHHHHHTHHHHHHHHS CS
  Acyl-CoA_ox_N  12 geeklerrrelesllesdpefddaedyyflsreeryeealrkatrllkklrelqierkeseeeallagplgtglldeslplglhfsMFlptlkgqg 107
                      + l+rr+++ ++l+ +++fd+ +++yf  r +r++ al+++++l ++  +++++     ++ l+a    + l++e+ p+glh sMFl+tl+ qg
     KHJ31624.1  43 A-DVLNRRQKILKILQAEKVFDK-SHNYFDGRVDRFKTALARSKKLRQLEIQHKWT----RQDLLDA----SDLISEPGPYGLHASMFLTTLRDQG 128
                    3.489******************.*******************************5....6676666....************************* PP

                    -HHHHHHHHHHHHTTSS- CS
  Acyl-CoA_ox_N 108 teeQqakWlpraenleii 125
                    t+eQ++ +l+ a+n+++i
     KHJ31624.1 129 TPEQHKLFLEPAQNYKYI 146
                    ***************987 PP

>> Acyl-CoA_dh_M  Acyl-CoA dehydrogenase, middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   0.0   3.9e-14   1.8e-10       1      97 []     148     258 ..     148     258 .. 0.86

  Alignments for each domain:
  == domain 1  score: 40.9 bits;  conditional E-value: 3.9e-14
                    EEE---SS-SS-GGG---EE.EEETT.EEEEE.....EEEEEEETTTT.-SEEEEEEE...TS-------EEEEEEE....GG..GEEE-----BS CS
  Acyl-CoA_dh_M   1 afalTEpqaGsdvasvktta.aerdggeyvln.....GeKiwitnaai.atlalvlar...tekpdrarglslflvp..rdap..gvsvrrieekl 82 
                    ++a TE ++Gs+v++++tta  + ++  ++l+      +K+wi++ +  a++a+v+a+    +kp + + + + + +  +++p  g+ v++i +k 
     KHJ31624.1 148 CYAQTELGHGSNVRGLETTAtWNPEDRTFTLHsphltSSKWWIGSLGRtANYAVVMAQlviGGKPYGPHPFVCQVRDlnTHQPldGIYVGDIGPKF 243
                    99******************99999999**99999989*****988777*********986555556677766666655555599*********** PP

                    S-TTS-EEEEEEE.. CS
  Acyl-CoA_dh_M  83 Glrglptgelvfedv 97 
                    G++++++g l f++v
     KHJ31624.1 244 GYNTMDNGFLLFNKV 258
                    ************986 PP

>> Acyl-CoA_dh_1  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.7   7.4e+03      25      52 ..      57      85 ..      52      99 .. 0.77
   2 !    7.4   0.0    0.0011       4.7       7      45 ..     288     326 ..     285     337 .. 0.91
   3 !   18.5   0.0     4e-07    0.0018      89     149 ..     411     471 ..     393     472 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.7
                   HHHHHHHHHHHHHHTS.B-CC-BGGGSHH CS
  Acyl-CoA_dh_1 25 larraleealeyarrr.kafgkplidhql 52
                    a+++++ +++y+  r ++f+++l+ +  
     KHJ31624.1 57 QAEKVFDKSHNYFDGRvDRFKTALARSKK 85
                   68899999999999986677777776655 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0011
                    HTTTT--S-----..-SHHHHHHHHHHHHHHHTSB-CC- CS
  Acyl-CoA_dh_1   7 ametlnheRlavaaaalglarraleealeyarrrkafgk 45 
                    +  tl++ R ++++++ g+++r +  al+y   r++f+ 
     KHJ31624.1 288 IYGTLTWVRSTIVLQSGGVLARGVTIALRYTAVRRQFQD 326
                    56799********************************85 PP

  == domain 3  score: 18.5 bits;  conditional E-value: 4e-07
                    HHHHHHHHHHHHHHHHHHHHHHGGGTTSGGGHHHHHHHHTHHHHHSSS-HHHHHHHHHHHH CS
  Acyl-CoA_dh_1  89 smaKlfaselaqevadlamqllGgaGyleeypverlyrdarvlrigeGtseiqrniiarrl 149
                      +K++as +a e  + a   +Gg+Gy+   +++ +y d++ +  +eG + ++ +++ar l
     KHJ31624.1 411 CGLKALASSIAAEGLEVARRACGGHGYSSFAGISSWYADYLPTATWEGDNYMLTQQVARYL 471
                    458******************************************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (699 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4870.58
//
Query:       KHJ31625.1  [L=208]
Description: putative uncharacterized thoc5 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-31  108.3  11.9    6.2e-31  108.0  11.9    1.1  1  FmiP_Thoc5  Fms-interacting protein/Thoc5
  ------ inclusion threshold ------
          1    9.0   8.2       0.13   12.0   2.3    2.1  2  Casc1_N     Cancer susceptibility candidate 1 N-terminus
        2.1    7.6   9.9        2.4    7.4   1.8    2.1  2  DUF3450     Protein of unknown function (DUF3450)


Domain annotation for each model (and alignments):
>> FmiP_Thoc5  Fms-interacting protein/Thoc5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.0  11.9     1e-34   6.2e-31       1     153 [.      63     207 ..      63     208 .] 0.98

  Alignments for each domain:
  == domain 1  score: 108.0 bits;  conditional E-value: 1e-34
  FmiP_Thoc5   1 eLkklnrltklrikkardktaeakqkvDskhlqlqNllyEkshlekEikkcldFkskdeeieLvpeeeFyeeapeeiskpedtkkeadehelmlaRLew 99 
                 +L+ l r+++++++++++ taea+q+vD++hlqlqNl yE  hl+ Ei++c+ ++ k +++ L+p+e+F++e pe+         ++de +l++aR+++
  KHJ31625.1  63 QLRGLHRDAHFEARETKALTAEARQEVDKLHLQLQNLYYEQRHLQGEITACESYDHKFQQLPLIPVEKFLAEYPEHA--------NDDEASLTIARIDH 153
                 5999*******************************************************************999999........56999********* PP

  FmiP_Thoc5 100 EleqRkelaeqlkeleekkkkleqeieekkkfLssLppkLkslkkatkplqeal 153
                 E  +R +l+eq + l +kk+ l ++++++k+ L +L + L++  +a+kp+q+ l
  KHJ31625.1 154 EHAERLKLEEQRQGLLKKKQGLIADNKKRKDDLANLDKDLEKFIDAAKPIQKIL 207
                 ***************************************************977 PP

>> Casc1_N  Cancer susceptibility candidate 1 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.4       0.1   6.1e+02      54      61 ..      84      91 ..      49     125 .. 0.53
   2 ?   12.0   2.3   2.1e-05      0.13       9      60 ..     149     201 ..     141     206 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.1
     Casc1_N 54 erkealek 61
                e ++++ k
  KHJ31625.1 84 EARQEVDK 91
                11111111 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 2.1e-05
     Casc1_N   9 eRlraeeeererleeerrekeereql.aaeqarrkeeleelkplleerkeale 60 
                 +R+  e +er +lee+r+   +++q   a+ ++rk+ l+ l + le++  a++
  KHJ31625.1 149 ARIDHEHAERLKLEEQRQGLLKKKQGlIADNKKRKDDLANLDKDLEKFIDAAK 201
                 7999*************9999999999*******************9999887 PP

>> DUF3450  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   1.8   0.00039       2.4      18      72 ..      68     122 ..      47     124 .. 0.80
   2 ?    5.0   1.3    0.0022        13      30      92 ..     142     204 ..     133     208 .] 0.78

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00039
     DUF3450  18 ldqalkeaekavaaaaqsqkkidklddekqellaeyralkeeleslevyneqler 72 
                  ++a+ ea+++ a  a++ +++dkl  + q+l  e r l+ e+ + e y  + ++
  KHJ31625.1  68 HRDAHFEARETKALTAEARQEVDKLHLQLQNLYYEQRHLQGEITACESYDHKFQQ 122
                 4677778888999999999999999999999999999999999999999888776 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0022
     DUF3450  30 aaaaqsqkkidklddekqellaeyralkeeleslevyneqlerlvasqeqeiasleeqieeie 92 
                 ++a+ + ++id+   e+ +l+++ + l ++++ l + n++ ++ +a++++++++     + i+
  KHJ31625.1 142 DEASLTIARIDHEHAERLKLEEQRQGLLKKKQGLIADNKKRKDDLANLDKDLEKFIDAAKPIQ 204
                 556666778888889999999999999999999999999999999999998888766666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1315  (0.0733449); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1494.17
//
Query:       KHJ31626.1  [L=230]
Description: putative secretory component protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.7e-77  257.2   0.2    5.7e-77  257.0   0.2    1.0  1  SHR3_chaperone  ER membrane protein SH3
  ------ inclusion threshold ------
       0.99    9.0   7.3        4.4    6.8   7.3    1.9  1  Virul_fac_BrkB  Virulence factor BrkB
        5.7    6.9   8.0        1.4    8.8   4.5    1.7  2  DUF5453         Family of unknown function (DUF5453)


Domain annotation for each model (and alignments):
>> SHR3_chaperone  ER membrane protein SH3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.0   0.2   9.6e-81   5.7e-77       2     177 ..      26     210 ..      25     220 .. 0.96

  Alignments for each domain:
  == domain 1  score: 257.0 bits;  conditional E-value: 9.6e-81
  SHR3_chaperone   2 lssvataliigstsFflGvlfanfpyDynlLwssestee.afdaalehykflhaspplikrilhiviglgliglliklykpsednllFdgaSLvL 95 
                     +ss+at++ii+s++FflG+lf+ +pyDy+lLw+s++t++ ++d+++ h++f+hasppli+r+lhivig+g+ gl+ikl+kpse+nllFdgaSLvL
      KHJ31626.1  26 VSSFATFMIISSVCFFLGMLFSALPYDYPLLWTSDVTPDaYYDQLEMHLRFIHASPPLISRMLHIVIGIGFFGLFIKLFKPSEANLLFDGASLVL 120
                     689***********************************99******************************************************* PP

  SHR3_chaperone  96 yvvgvvvyitnivkglrtvtegawge........vdredslkvlaasntilalvLvGVlvLQaGqwYaerkeqeeleefeeeeaeeaaak 177
                     yvvgv+vyi+nivkglr+vt+g++g+        ++r dslkvlaasntilal+LvG+lvLQaGqwYaerk+++e ++fe+ee+ +  a+
      KHJ31626.1 121 YVVGVIVYISNIVKGLRIVTNGSYGAdeidsslaFGRVDSLKVLAASNTILALMLVGILVLQAGQWYAERKDHDETARFEREEEMKVLAT 210
                     ********************************************************************************9999876554 PP

>> Virul_fac_BrkB  Virulence factor BrkB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   7.3   0.00073       4.4      65     140 ..     109     185 ..      20     202 .. 0.68

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.00073
  Virul_fac_BrkB  65 qrllnqaslgllglavllwsasggvsalrralnkiygvee.srsflrkrllsllllllllvllllslvlsvflqsll 140
                     ++ll  ++  +l ++++++  s++v++lr   n  yg++e   s+  +r++sl +l +   +l+l+lv +++lq+ +
      KHJ31626.1 109 ANLLFDGASLVLYVVGVIVYISNIVKGLRIVTNGSYGADEiDSSLAFGRVDSLKVLAASNTILALMLVGILVLQAGQ 185
                     4555555666777888889*******************666899********9999988888888888888888733 PP

>> DUF5453  Family of unknown function (DUF5453)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1       1.3   7.8e+03      42      53 ..      32      46 ..      25      58 .. 0.49
   2 ?    8.8   4.5   0.00024       1.4      44     102 ..      83     139 ..      77     182 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.3
     DUF5453 42 iliita...llGvvl 53
                ++ii++   +lG++ 
  KHJ31626.1 32 FMIISSvcfFLGMLF 46
                333332111444444 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00024
     DUF5453  44 iitallGvvlgivlyffdvkfflkdypykkfhfdkkytrvylsGvivfllnillgvlll 102
                 +i+ +l +v+gi ++++ +k f        + fd    ++y+ Gviv++ ni+ g+ ++
  KHJ31626.1  83 LISRMLHIVIGIGFFGLFIKLFKP--SEANLLFDGASLVLYVVGVIVYISNIVKGLRIV 139
                 5778999**********9**9965..4568999*******************9987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       629  (0.0350828); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1736.03
//
Query:       KHJ31627.1  [L=215]
Description: hypothetical protein EV44_g5312 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.015   15.2   0.1      0.037   13.9   0.0    1.5  1  Myc_target_1     Myc target protein 1
      0.018   14.7   0.1      0.025   14.2   0.1    1.1  1  DUF4310          Domain of unknown function (DUF4310)
      0.036   14.0   0.0      0.055   13.4   0.0    1.2  1  Orthoreo_P10     Orthoreovirus membrane fusion protein p10
        1.3    9.4   2.5        2.2    8.7   2.5    1.3  1  FeoB_associated  FeoB-associated Cys-rich membrane protein


Domain annotation for each model (and alignments):
>> Myc_target_1  Myc target protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   8.3e-06     0.037      11      83 ..      13      85 ..       8      94 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.3e-06
  Myc_target_1 11 eilesfdledlilaFcvSmvvGLllgaliyvlltwlsrrrasaritrrssrrsrssssssssrsrlgfyrsss 83
                  ++ + f l+ +il F+  +v+G l+  +++ +  +  +++  a+ tr+ ++ s  +  ++ ++  lg+y s+s
    KHJ31627.1 13 RTRKRFSLTSIILGFFPGLVIGGLIIVVVFYIRKFYIKKKREAKGTRSIKHISAPQPINDVRTDFLGIYASKS 85
                  567899****************************************999998887666666666677776665 PP

>> DUF4310  Domain of unknown function (DUF4310)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   5.7e-06     0.025      95     145 ..       8      58 ..       4      65 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.7e-06
     DUF4310  95 pavllsagikaplesfalslltGlvlGliiGviiilirkltinqsnstfGa 145
                 pa    +  +++l+s++l +  Glv+G +i v+++ irk+ i+++  + G+
  KHJ31627.1   8 PASTERTRKRFSLTSIILGFFPGLVIGGLIIVVVFYIRKFYIKKKREAKGT 58 
                 5555556678899999999999****999999************9999998 PP

>> Orthoreo_P10  Orthoreovirus membrane fusion protein p10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   1.2e-05     0.055      34      75 ..      20      60 ..       8      66 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.2e-05
  Orthoreo_P10 34 atssliaywpylaagggliviilllallycckakvkadavrs 75
                   ts ++ ++p l +gg +iv+++ +  +y  k k  a+ +rs
    KHJ31627.1 20 LTSIILGFFPGLVIGGLIIVVVFYIRKFYIKK-KREAKGTRS 60
                  699************99999999999988644.445555555 PP

>> FeoB_associated  FeoB-associated Cys-rich membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   2.5    0.0005       2.2       4      26 ..      32      53 ..      30      57 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0005
  FeoB_associated  4 IVgliiaaavafvirrlikkkkk 26
                     ++g++i+++v++ ir+++ kkk 
       KHJ31627.1 32 VIGGLIIVVVFY-IRKFYIKKKR 53
                     799999987776.6666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1620.82
//
Query:       KHJ31628.1  [L=374]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2883.06
//
Query:       KHJ31629.1  [L=277]
Description: hypothetical protein EV44_g3672 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       344  (0.0191868); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1914.79
//
Query:       KHJ31630.1  [L=263]
Description: hypothetical protein EV44_g3326 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.74   10.3   6.3       0.72   10.3   0.7    2.4  2  DUF4094   Domain of unknown function (DUF4094)
          1    9.7   8.1        3.4    8.0   2.5    2.5  2  DUF641    Plant protein of unknown function (DUF641)


Domain annotation for each model (and alignments):
>> DUF4094  Domain of unknown function (DUF4094)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.7   8.1e-05      0.72      29      82 ..      22      84 ..      10      89 .. 0.66
   2 ?    2.7   0.6     0.019   1.7e+02      41      82 ..     187     230 ..     146     238 .. 0.48

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 8.1e-05
     DUF4094 29 diirqs.k..eelklvsedcds..kdaesr....skdilgevskthkaiqtLdktissLemeL 82
                +  + + k  ++l l ++d +    d+  +    sk+il+  s++++ ++ L+ +is L  +L
  KHJ31630.1 22 QSKSDNsKqnDNLPLLNSDIKRliIDKSCDshlfSKNILDTSSHKPQSLSPLNTSISHLDSDL 84
                333344332344444677777666333333457899***********************9887 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.019
     DUF4094  41 vsedcdskdaesrskdilgevskthkaiqtL..............dktissLemeL 82 
                 + +d +              +++++++iq L              +++  +Le eL
  KHJ31630.1 187 SVQDLKI------------IMQQKEQDIQFLkkevirnrndtlvwKNRCTKLESEL 230
                 2233332............4445555666553333333333334466666666666 PP

>> DUF641  Plant protein of unknown function (DUF641)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   2.5   0.00038       3.4      80     120 ..     174     214 ..     141     222 .. 0.76
   2 ?    5.1   0.6    0.0031        28      90     116 ..     219     245 ..     208     251 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00038
      DUF641  80 iqeqrsllktyeitvkkleaelkakdseieeLkekLeeaek 120
                 +++q+  l+     v++l+  +++k+++i+ Lk+++ ++++
  KHJ31630.1 174 LHQQQISLEENRSSVQDLKIIMQQKEQDIQFLKKEVIRNRN 214
                 345888899999**********************9877655 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0031
      DUF641  90 yeitvkkleaelkakdseieeLkekLe 116
                  + +  kle+elk+k++e+  ++e+++
  KHJ31630.1 219 WKNRCTKLESELKEKNNELVMIRETVR 245
                 566789****************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1474  (0.0822132); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 1928.85
//
Query:       KHJ31631.1  [L=636]
Description: putative triacylglycerol lipase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      8e-82  275.7   0.0    1.1e-81  275.3   0.0    1.0  1  COesterase     Carboxylesterase family
      0.003   17.0   0.3     0.0061   16.1   0.3    1.4  1  YoaP           YoaP-like
     0.0047   16.8   0.1      0.018   14.9   0.1    1.9  1  Abhydrolase_3  alpha/beta hydrolase fold
  ------ inclusion threshold ------
       0.15   11.5   0.1       0.23   10.9   0.1    1.3  1  Peptidase_S9   Prolyl oligopeptidase family


Domain annotation for each model (and alignments):
>> COesterase  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  275.3   0.0   2.4e-85   1.1e-81      23     495 ..     150     607 ..     135     623 .. 0.88

  Alignments for each domain:
  == domain 1  score: 275.3 bits;  conditional E-value: 2.4e-85
                 S.EEEEEEEEESSB---GGGTTS--BE----SSEEECBS---BESEECSSSSSCGHHCHHHBES---EEEEEEESSSSSTTSSEEEEEEE--STTTS-B CS
  COesterase  23 k.evdaFlGiPYAepPvgelRFkkPepaepwtgvrdAtkfspaCpqnaeksekeekeleawvsEDCLyLnvytPkekkeakkklPVlVwihGggfqtgs 120
                 +  v  +lGi+YA+pP+g lRF++P  +e+ ++++ A++++p C ++ ++  + +       sEDCL+L++y+P+  ++     PV+V+i Ggg+    
  KHJ31631.1 150 DiGVIKWLGIRYAAPPTGILRFRAPADPETDSKTYLANQHAPLCHSTPSTKLNHN------SSEDCLFLDIYAPS--SNPGPH-PVFVFIQGGGLNGLA 239
                 25899***************************************99997666655......7************6..445555.************888 PP

                 GCGS-THHHHHHH..TSEEEEE----HHHHH-B-SS..TTSBS-HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSGGGT..TSBS CS
  COesterase 121 aseydgsaLaaeg..nvivVtinYRlGvlGFlstgd..eeapGNvGllDqvlALrWVkenIasFGGdpervtlfGesAGaasvsllllsplsr..glfk 213
                 + + dg++L++    nv+vVt+nYR+G++GFl+ ++  ++ + NvGllDq+  L+W ++ I+ FGGdp +vtl G+sAGa sv+l+l+    r  glf+
  KHJ31631.1 240 NPNLDGTKLVTAAdfNVVVVTFNYRVGLFGFLASEEirKNGDLNVGLLDQRKVLEWTQKYIEIFGGDPHHVTLGGSSAGAGSVALHLTAYGGRndGLFH 338
                 888******988778*******************776688888**********************************************7666569*** PP

                 EEEEES--TTSTTTSBSHHHHHHHHHHHHTTS-CSSHHHHHHHHHCS-HHHHHHCCGG...SSSSSSTTC-SSS-B--SSSSSS-HHHHHHCGC..CSE CS
  COesterase 214 raIlqSGsalspwaiqkkarkrakklakkvgckassskelveclrsksaeelldaqek...aleasssklvsfaPvvdgdflpekPeellkseg..kvp 307
                  a + S s  s+++++ + + + ++l ++v+c  + + ++++clr  +++ l +++++   +   +  + ++   v+dg+f  ++  +l+ + +  kvp
  KHJ31631.1 339 AAASGSPSFGSKTTVEGS-QYQYDTLVERVNC--NATVDTLQCLRDLDVKVLAEHNQNiltVGGGGGYPVFPYTNVIDGNFTIANTYSLFYEGKfiKVP 434
                 *******99999999885.5567899******..667799******************554444555666666678******99********77***** PP

                 EEEEEETTTTHHHHCCHSTTTSSSSHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHSTTTSSTCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTT- CS
  COesterase 308 lliGvnkdegllflaylldkeksvkkkeeklsesllkdelyleaekkeelseaikeeytdeadrddaeksrkallelltdvlfkapvlrtaklhasrgs 406
                 +++G  ++eg++f  +  ++        +++ ++ lkd++ +    +e+   +i ++y + ++ ++++++ +a +++++++ +++p + + ++ +++g 
  KHJ31631.1 435 VIFGDDTNEGTIFTPTSIQN--------STDMNNFLKDNFPNL---NESQLVSINNYYPKAEKFANKSEYWSAAANAYGEMRYICPGIFLNSQFSKYGL 522
                 ***************77776........666677778888888...6788899******999**************************99999997776 PP

                 S.EEEEEEE--STTSSSTTTGSSBTTTTHHHHTTGGGTSGCSS-HHHHHHHHHHHHHHHHHHHHSSTTS...TTSS----B.TTTBEEEEESS CS
  COesterase 407 p.vYlYsfdyrnssskkpkwmgvvhgdeleyvfglpllekeeftkedeklsrkmmtywtnFaktgnPnk...eeeekWpkytkeeekylkinl 495
                 +  + ++ d  +++++  +  gv+h+ +l+ ++g++          ++ l  ++ +ywt+F++t nPn+   ++++ W+++++++ + l++  
  KHJ31631.1 523 SrQWNFRWDVLERQNAA-SGLGVTHTADLSSIWGTSQP-------PEKALIPTIQSYWTSFIRTYNPNShklDTTPVWEPFDANRMQRLRLAS 607
                 55999999998866555.579*************8654.......3789********************99999********99999888765 PP

>> YoaP  YoaP-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.3   1.4e-06    0.0061      18      32 ..     417     431 ..     416     434 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.4e-06
        YoaP  18 cpfttyalFynGkFi 32 
                 ++++ty+lFy+GkFi
  KHJ31631.1 417 TIANTYSLFYEGKFI 431
                 689***********8 PP

>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1   3.9e-06     0.018      24      90 ..     250     328 ..     227     379 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 3.9e-06
                    HHHHHTSEEEEEE--......-TTTS.....-TTHHHHHHHHHHHHHHHTHHHHTETTCEEEEEEETHHHH.HHHHHHH CS
  Abhydrolase_3  24 lakelgavvvsvdYr......lAPeh.....pfPaavedalaalrwlaeqawelgadpsrivlaGdSaGGn.laaaval 90 
                     a++ ++vvv  +Yr      lA e       +   + d  ++l+w ++  + +g dp +++l+G SaG+   a++++ 
     KHJ31631.1 250 TAADFNVVVVTFNYRvglfgfLASEEirkngDLNVGLLDQRKVLEWTQKYIEIFGGDPHHVTLGGSSAGAGsVALHLTA 328
                    4777777777777775555555666433333466778899**********99*****************6515555553 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   5.2e-05      0.23       5     107 ..     246     355 ..     241     399 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 5.2e-05
                   HHHHHHHCCT-EEEEE--TTSST...THCHHHHTTSGGGGHHHHHHHHHHHHHHHHTTS--GGGEEEEEETHHHHHHHHHHH....H-GGG-SEEEE CS
  Peptidase_S9   5 selqlladrGyvvvvanirGsgg...yGeafhdagkrklgqnefdDfiaaaealakegyvdserlaitGgSyGGyltgaaln....qrpdlFkaava 94 
                   ++l ++ad ++vvv  n+r +      +e+ +++g+ + g  + + +++++++ ++ +  d+ ++ + G S+G   ++  l+    +++ lF+aa++
    KHJ31631.1 246 TKLVTAADFNVVVVTFNYRVGLFgflASEEIRKNGDLNVGLLDQRKVLEWTQKYIEIFGGDPHHVTLGGSSAGAGSVALHLTayggRNDGLFHAAAS 342
                   66778899999********7753233699********************************************987776555222467789999999 PP

                   ESE---CCCHHCS CS
  Peptidase_S9  95 evpvvdvlrydsd 107
                   + p +   ++   
    KHJ31631.1 343 GSPSFGSKTTVEG 355
                   9998876666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (636 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 4366.13
//
Query:       KHJ31632.1  [L=428]
Description: putative ethanolamine-phosphate cytidylyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-25   88.9   0.0    2.4e-21   76.4   0.0    2.9  3  CTP_transf_like  Cytidylyltransferase-like
     0.0069   16.5   0.0      0.016   15.3   0.0    1.5  1  LidA_Long_CC     LidA long coiled-coil domain


Domain annotation for each model (and alignments):
>> CTP_transf_like  Cytidylyltransferase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.4   0.0   2.7e-25   2.4e-21       2     141 ..      26     149 ..      25     151 .. 0.97
   2 !    8.7   0.0   0.00021       1.9       1      38 [.     243     281 ..     243     292 .. 0.75
   3 ?   -0.4   0.0      0.14   1.2e+03      28      79 ..     297     351 ..     283     366 .. 0.81

  Alignments for each domain:
  == domain 1  score: 76.4 bits;  conditional E-value: 2.7e-25
                      EEE--TT--HHHHHHHHHHHHHSSESEEEEEESSTHCSST-.SCSSTHHHHHHHHHHHTTCTTEEEEEEESEHHHHHHHTTTTEEEEEEEHHHH CS
  CTP_transf_like   2 agGtFDpiHlGHlrlleqakklleedlivgvpsdeppkkkk.kplasaeeRlemlelakevdevisvdpweltrevlkklkpdklylvigadvl 94 
                      ++G+ D++H+GH+  + qa+kl++e l+vgv+sd++   +k ++++++eeR+  + ++k+v + is +p+++   +++ ++++  y+v+g+d  
       KHJ31632.1  26 VDGCWDFFHHGHAGAILQARKLGSE-LYVGVHSDKSILENKgPTVMTLEERIIAVNACKWVTRSISHAPYVTSLPWITHYGCK--YVVHGDDIT 116
                      79***********************.************9977*****************************************..*******99 PP

                      HHHHCHHHHHHHHHHHHHEEEEEEHTTCEEEEEEECCTTTCSHHHHH CS
  CTP_transf_like  95 edfsewkeleeilgnvklvvvsrpekqanvllkaekrtngiSstkir 141
                      +d     + +++++ vk +++          +k  krt+ iS+t++ 
       KHJ31632.1 117 SDS----DGQDCYRYVKAAGR----------FKVVKRTPSISTTDLV 149
                      997....**************..........*************985 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00021
                      EEEE--TT--HHHHHHHHHHHHHSSES.EEEEEESSTHC CS
  CTP_transf_like   1 lagGtFDpiHlGHlrlleqakklleed.livgvpsdepp 38 
                      +++G+FD++  GH++ l+ + +  ee    +g +s +++
       KHJ31632.1 243 YVDGSFDLFSSGHIEFLRLVVQNEEEIsRKMGWYSEVEA 281
                      689*************99887766665555555555555 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.14
                      EEEEEESSTHCSST-...SCSSTHHHHHHHHHHHTTCTTEEEEEEESEHHHHHHH CS
  CTP_transf_like  28 livgvpsdeppkkkk...kplasaeeRlemlelakevdevisvdpweltrevlkk 79 
                      +i g+++de+ ++ k    p+++  eR   + ++k+ +++i  +p+ l +++l +
       KHJ31632.1 297 VIAGIHNDETINHLKglnYPIMNILERGLCVLQCKYINSAIFGAPIMLSHSFLSS 351
                      8999999999999865888999999999999999999999999888887777665 PP

>> LidA_Long_CC  LidA long coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.8e-06     0.016      63     150 ..     109     201 ..     104     207 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.8e-06
                   HHTTSEEEE-TTS-EESSGGG-S..E.EEETTEEEEEEET..EEEEEESS--HHHHTT-HHHHHHHHHHHHT---B-HHHHHHHHHHHHHHHH CS
  LidA_Long_CC  63 vlkgeKilvnadGeevtsfkeAa..F.vlpkdkkivkked..kyYLLkagqdleslsedekeqAkknfeklkpeimtvkklvhhnkklEleeh 150
                   v++g+ i  ++dG+ ++ + +Aa  F v++++ +i   +    + L + ++ +++l++  +++ + ++ek++ +  +vkkl++   + E++++
    KHJ31632.1 109 VVHGDDITSDSDGQDCYRYVKAAgrFkVVKRTPSISTTDLvgRMLLCTRTHFIRNLNQLIQDTSHDEYEKSQNDGVNVKKLIQAYATDETGLN 201
                   7888888899999999999888644558888888877776746666667799**********************************9999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (428 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3092.11
//
Query:       KHJ31633.1  [L=301]
Description: hypothetical protein EV44_g6253 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2208.55
//
Query:       KHJ31634.1  [L=974]
Description: putative phosphatidylethanolamine n-methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-58  195.3  10.8    1.4e-35  121.8   1.6    2.7  2  PEMT      Phospholipid methyltransferase
     0.0017   18.2   0.0     0.0048   16.7   0.0    1.7  1  HECW_N    N-terminal domain of E3 ubiquitin-protein ligase HE
  ------ inclusion threshold ------
      0.028   14.8   3.0        4.1    7.9   0.1    3.2  2  ICMT      Isoprenylcysteine carboxyl methyltransferase (ICMT)


Domain annotation for each model (and alignments):
>> PEMT  Phospholipid methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.5   2.2   1.4e-25   8.6e-22       3     103 ..     230     330 ..     228     332 .. 0.98
   2 !  121.8   1.6   2.4e-39   1.4e-35       2     104 ..     506     608 ..     505     609 .. 0.98

  Alignments for each domain:
  == domain 1  score: 77.5 bits;  conditional E-value: 1.4e-25
        PEMT   3 lilGlllialglllvlssiealgefgtfygdfFlelmdklvtsGiYrylnnPeyvgstlgflGlaLitgsaaglllallvllvylialkfvEephlaki 101
                  ++G+ll+ ++l++ l +++ +++  ++ gdfF+  ++kl+ +G++++  +P+y  +++g++G++++  s+++l+++++++++ +++l++vE+ph++ki
  KHJ31634.1 230 WTVGVLLVGFNLWVKLDAHRVVKDYAWYWGDFFYMVDQKLTFDGVFEMAPHPMYSVGYAGYYGISMMAASYKVLFISIIAHTAQFLFLIYVENPHIEKI 328
                 679************************************************************************************************ PP

        PEMT 102 Yg 103
                 Y 
  KHJ31634.1 329 YN 330
                 *6 PP

  == domain 2  score: 121.8 bits;  conditional E-value: 2.4e-39
        PEMT   2 rlilGlllialglllvlssiealgefgtfygdfFlelmdklvtsGiYrylnnPeyvgstlgflGlaLitgsaaglllallvllvylialkfvEephlak 100
                 r++lG+ li l++++++s++e+lgefg+f+gdfF++++ kl++sGiYrylnnPe+++++++++G++Lit+s a+++lal+++++ l ++++vE+ph+ +
  KHJ31634.1 506 RHVLGVGLITLQIWTAISIYETLGEFGWFFGDFFFDKDIKLTYSGIYRYLNNPERILGLASIWGAVLITNSSAIFFLALISHMLSLGFIQLVEKPHMHR 604
                 89************************************************************************************************* PP

        PEMT 101 iYgk 104
                 +Yg+
  KHJ31634.1 605 LYGR 608
                 **96 PP

>> HECW_N  N-terminal domain of E3 ubiquitin-protein ligase HECW1 and 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0     8e-07    0.0048      28      64 ..     738     774 ..     728     779 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 8e-07
      HECW_N  28 ksqslvisWDikeevdaeDWiGlylidetnsenfldy 64 
                   + +++ W     ++++DWiGly++ ++ s+++  +
  KHJ31634.1 738 YGAPIIVKWRAPTYCKKNDWIGLYMVADNASREVTRV 774
                 56789***********************999887765 PP

>> ICMT  Isoprenylcysteine carboxyl methyltransferase (ICMT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.4    0.0034        20      32      89 ..     266     322 ..     240     327 .. 0.76
   2 ?    7.9   0.1   0.00069       4.1      27      78 ..     538     586 ..     509     597 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0034
        ICMT  32 dhklvksglykylrHPnYllfvilelatllLlcnakltalvllalvalllfvRikeEe 89 
                 d+kl  +g++++  HP Y +  +    +++++   + + ++ +++ ++ ++  i+ E+
  KHJ31634.1 266 DQKLTFDGVFEMAPHPMYSV-GYAGYYGISMMAASYKVLFISIIAHTAQFLFLIYVEN 322
                 6788899***********99.5556666666666667777777777777776677776 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00069
        ICMT  27 vailpdhklvksglykylrHPnYllfvilelatllLlcnakltalvllalva 78 
                  +  +d kl  sg+y+yl  P  +l  + ++ +++L++n    a+++lal  
  KHJ31634.1 538 FFFDKDIKLTYSGIYRYLNNPERIL-GLASIWGAVLITNS--SAIFFLALIS 586
                 4567899999*************99.899**********9..4444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (974 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.25s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 6644.16
//
Query:       KHJ31635.1  [L=103]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 767.97
//
Query:       KHJ31636.1  [L=115]
Description: putative translation initiation factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.6e-27   95.2   4.3    3.3e-27   94.8   4.3    1.2  1  SUI1          Translation initiation factor SUI1
  ------ inclusion threshold ------
      0.079   13.2   0.3       0.12   12.6   0.3    1.2  1  GlcNAc-1_reg  Putative GlcNAc-1 phosphotransferase regulatory


Domain annotation for each model (and alignments):
>> SUI1  Translation initiation factor SUI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.8   4.3   3.7e-31   3.3e-27       2      73 ..      27      99 ..      26     104 .. 0.92

  Alignments for each domain:
  == domain 1  score: 94.8 bits;  conditional E-value: 3.7e-31
        SUI1  2 kpkihirleqrggrKkvTtvsgleafgidlkklakelkkkfacsgsvvk..dggeeiqvQGdqrkkvaelLtek 73
                +++ihir++qr+grK++Ttv+gl ++++d kk++k +kkkfac+g++v   + ge+iq+QGdqrk+v+e+Lt+k
  KHJ31636.1 27 QNYIHIRIQQRNGRKTLTTVQGL-PKKFDQKKILKVIKKKFACNGTIVVdiEMGEVIQLQGDQRKDVQEFLTDK 99
                789********************.**********************977443359*****************98 PP

>> GlcNAc-1_reg  Putative GlcNAc-1 phosphotransferase regulatory domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.3   1.4e-05      0.12      10      80 ..      43     112 ..      40     114 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.4e-05
  GlcNAc-1_reg  10 lvllsglPatfketnelkskLeeklaekvkllelylekrvalldlndfkdldeLlkddkknvtidndelrL 80 
                   l  + glP++f++ +++   ++ k+a     +       v  l+ ++ kd++e+l d+k+ + +d++++++
    KHJ31636.1  43 LTTVQGLPKKFDQ-KKILKVIKKKFACNGTIVVDIEMGEVIQLQGDQRKDVQEFLTDKKEGLELDSKTIKV 112
                   67899********.777778999**998877755566789999*************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 804.04
//
Query:       KHJ31637.1  [L=286]
Description: hypothetical protein EV44_g2332 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-16   60.6   0.0    1.4e-16   60.3   0.0    1.2  1  MBA1      MBA1-like protein
     0.0029   17.7   0.2     0.0043   17.2   0.2    1.2  1  Tim44     Tim44-like domain


Domain annotation for each model (and alignments):
>> MBA1  MBA1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.3   0.0   1.6e-20   1.4e-16      72     205 ..     135     278 ..      64     284 .. 0.86

  Alignments for each domain:
  == domain 1  score: 60.3 bits;  conditional E-value: 1.6e-20
        MBA1  72 wknkAietyvkvNkafAareleqleelvslwvkeaLkarakqlPdnvkldwelikfnsvPKlvslqalmipgkplelvqlvyrfdtkQklikvdkk..s 168
                 +  +Ai  + +  +afA+ +  +l + +   +++   +r    P + k+ wel+k+++ PKl+s  a++ p +++ l q+v+r+  kQkl + +k+  +
  KHJ31637.1 135 LVPTAIALHRQMYTAFAEADDITLRNICLDGINDNFRNRIAHRPREEKVTWELLKYSKTPKLISNRAAKTPINGMILRQAVVRICSKQKLTRYTKIrgT 233
                 5679**************************************************************************************999986224 PP

        MBA1 169 skvek.....ldrdvvdyiafl..ldattn.ellLvGsvfeskvd 205
                  k e+      ++dvv+yi+++  ++++   +++++G+  e+ ++
  KHJ31637.1 234 TKLEQikgsgKEKDVVEYIVIQrvYEQWKPqNWMIWGTAQETSLE 278
                 5555422222589*******964378888789******9999876 PP

>> Tim44  Tim44-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.2   4.8e-07    0.0043      22     146 ..     137     272 ..     119     273 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 4.8e-07
                 HHHHHTHHHHHHHHHHT-HHHHHHHB-HHHHHHHHHHHHHH.HHTT....-EE--EEEEEEEEEEEEEEEE.TTEEEEEEEEEEEEE-E.E-TTS.-EE CS
       Tim44  22 eeakeayepileayakgDletLrkllteevyeefkaeiker.akqg....ltldaellgirevdlkeakie.gdtavltvrfrtqqisv.tddatGevv 113
                  +a ++ ++ ++a+a+ D  tLr+++ + + ++f + i+ r ++++    l + +++ ++ + + +++ i+     +++vr+ ++q+   +++  G   
  KHJ31637.1 137 PTAIALHRQMYTAFAEADDITLRNICLDGINDNFRNRIAHRpREEKvtweLLKYSKTPKLISNRAAKTPINgMILRQAVVRICSKQKLTrYTKIRGTTK 235
                 55666677899***************************999766556666888999999999999999999667799*********9997666677654 PP

                 EE...-TT--EEEEEEEEEEE--S-G.GG-EEEEEEE CS
       Tim44 114 eG...dedkvvevrevwtfeRdlgse.dpnWrLveiq 146
                       + k ++v e+++++R  ++   +nW + +++
  KHJ31637.1 236 LEqikGSGKEKDVVEYIVIQRVYEQWkPQNWMIWGTA 272
                 4433348899************666557899998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       325  (0.0181271); expected 358.6 (0.02)
Passed bias filter:                      254  (0.014167); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 2110.05
//
Query:       KHJ31638.1  [L=667]
Description: putative rho gtpase activator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-47  161.1   0.0    3.6e-47  160.0   0.0    1.6  1  RhoGAP    RhoGAP domain
    1.7e-13   50.7   2.3    1.3e-12   47.8   0.1    2.6  2  FCH       Fes/CIP4, and EFC/F-BAR homology domain


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.0   0.0     4e-51   3.6e-47       1     147 [.     488     638 ..     488     643 .. 0.97

  Alignments for each domain:
  == domain 1  score: 160.0 bits;  conditional E-value: 4e-51
                 BHHHHHHHHHHHHHTTTSTTTTTS-S-HHHHHHHHHHHHHTGGGCT....TTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHHHHTSSSHHHHHHH CS
      RhoGAP   1 PiivekcvefiekrgldtegiyRvsgskarvkelreafdkgkavds....dleeedvhavaslLKrfLrelpepLltkelyeelieaaksedeeerlea 95 
                 P++v++c+++++  gl++egiyR+sg +++v+++r+ fd++++ ++        +dv++va+lLK+f+r+lp+pLlt e+y ++ieaak+ede    ++
  KHJ31638.1 488 PMVVRQCIQAVDLFGLEVEGIYRLSGTTSQVNKIRSLFDNDASLVDfrdpANFFHDVNSVAGLLKQFFRDLPDPLLTSEHYTSFIEAAKNEDEILCRDS 586
                 9*******************************************9999998999********************************************* PP

                 HHHHHTTS-HHHHHHHHHHHHHHHHHHHTHHHH---HHHHHHHHHHHHHT-T CS
      RhoGAP  96 lkellekLPkenrdtLryLlehLkrvaenskenkMtaknLaivfaPtLlrpk 147
                 l++++++L+++n++tLr++  hL+rv++nsk n+M+++nLaivf+PtL+  +
  KHJ31638.1 587 LHAIINSLSDPNYATLRAITLHLHRVQDNSKINRMNISNLAIVFGPTLMGVN 638
                 ************************************************9765 PP

>> FCH  Fes/CIP4, and EFC/F-BAR homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   0.1   1.5e-16   1.3e-12       1      75 [.      61     136 ..      61     138 .. 0.93
   2 ?    1.9   0.3      0.03   2.7e+02      21      70 ..     224     271 ..     219     278 .. 0.76

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 1.5e-16
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT----TT.-.....HHHHHHHHHHHHHHHHHHHHH CS
         FCH   1 gfkvlqkrleqgialledlqeflkeRaeiEkeYakkLqkLakkylkrr.kkkseestlvtawtvlleeteklaqsh 75 
                 g+++l++rl+q++a+ ++++ fl++R+ +E+e+++ L+kL++ ++++  k + +++++++a++++ + +e++a++ 
  KHJ31638.1  61 GVSTLLNRLKQSVASAKEFAVFLRKRSILEEEHSNGLRKLCRLTAESIkKPDYRHGSFLSAFEEVTNIHERMAENG 136
                 7899******************************************8855555*******************9875 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.03
                 HHHHHHHHHHHHHHHHHHHHCT----TT-.....HHHHHHHHHHHHHHHH CS
         FCH  21 eflkeRaeiEkeYakkLqkLakkylkrrkkkseestlvtawtvlleetek 70 
                 + l++  + + +Ya k q+   + ++   +k ++  +v+a+++l++e+++
  KHJ31638.1 224 DILRKLYAADADYASKVQAAQAQRADLW-TK-SRPDTVNALEELIKECDS 271
                 5678888999999999998887777764.33.345677799999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (667 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       952  (0.0530983); expected 358.6 (0.02)
Passed bias filter:                      555  (0.0309554); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.25s 00:00:00.88 Elapsed: 00:00:00.41
# Mc/sec: 4879.33
//
Query:       KHJ31639.1  [L=1483]
Description: putative transcription mediator subunit med12 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.8e-26   90.8   0.4    1.4e-25   89.3   0.4    1.9  1  Med12         Transcription mediator complex subunit Med12
  ------ inclusion threshold ------
      0.086   11.7   0.0       0.17   10.7   0.0    1.3  1  Med12-LCEWAV  Eukaryotic Mediator 12 subunit domain


Domain annotation for each model (and alignments):
>> Med12  Transcription mediator complex subunit Med12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.3   0.4   1.6e-29   1.4e-25       1      63 []     250     312 ..     250     312 .. 0.99

  Alignments for each domain:
  == domain 1  score: 89.3 bits;  conditional E-value: 1.6e-29
       Med12   1 fkpPsrvtlndakrenwlkdLadpsvpLtrLsrsvPhgfrgekLlemllrksVpisRAvWfir 63 
                 fkpP+rvt++d+kre wlkdLa+p+ +L+rLsrs+Phg+rg+ Lle+ l k++pi+RAvW+ +
  KHJ31639.1 250 FKPPPRVTVTDTKREIWLKDLANPTSSLRRLSRSIPHGIRGKVLLEQSLVKNIPIERAVWLAK 312
                 89**********************************************************987 PP

>> Med12-LCEWAV  Eukaryotic Mediator 12 subunit domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   1.8e-05      0.17     324     397 ..     610     689 ..     596     734 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 1.8e-05
  Med12-LCEWAV 324 tnLVlLFseLirhDVFSHdaYmctLiSRGdlasessatlnkp......akspaeeseeeveekeeelvseidlkakklee 397
                   ++L ++ seL r   FS   Y   Li RG +++++s  +  p      a+ p+++ +++ + ++ +l  + ++  +++++
    KHJ31639.1 610 SDLYHIISELARSGHFSSSKYFQWLIARGGIQNSHSLEKDGPcalrllAELPTANLNQSLRGTRLNLLRRANFSIDREQD 689
                   5799****************************999998766666666655555555555555555555555555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1483 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.81u 0.29s 00:00:01.10 Elapsed: 00:00:00.45
# Mc/sec: 10001.85
//
Query:       KHJ31640.1  [L=353]
Description: putative lysophospholipase plb1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.7e-106  355.4   0.8   4.2e-106  355.3   0.8    1.0  1  PLA2_B    Lysophospholipase catalytic domain


Domain annotation for each model (and alignments):
>> PLA2_B  Lysophospholipase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  355.3   0.8  2.3e-110  4.2e-106     166     491 .]       8     315 ..       1     315 [. 0.94

  Alignments for each domain:
  == domain 1  score: 355.3 bits;  conditional E-value: 2.3e-110
      PLA2_B 166 kpgetvinlNatvfEfsPyelgswdaklnsFvpveylGtklsnGtvvkkgkcvagfdnaGflmgtsstlFnevlleinstsmlesllkellkkllkdls 264
                    e+  ++ ++vfE++P+elg+wd+++ +F+p+ey+G+++s Gtv+++g cv+gfd++Gfl+g+ stlF e+l ++ ++     +  +++++ l++ls
  KHJ31640.1   8 LSKEEQNSVISNVFEMNPFELGTWDTNIAGFAPMEYIGSNFSGGTVPSDGTCVKGFDQVGFLIGATSTLFEEALNRAVNS-----TGISIFRSALQMLS 101
                 344444445589*************************************************************9875443.....457899******** PP

      PLA2_B 265 edsedisqyapnpfkdaeeenqnatqsivesktLdlvdggedgqniplvpllqkerevdvifaldnsadteeswpdgvslvatyeRvleskqvkgkkfp 363
                 + ++d++q +pnpf d++       ++iv+s++L lvdgg dgqn+pl pllq++r+vdvifa+d+sad+++  p+g++lvatyeR l+ k  +  +fp
  KHJ31640.1 102 KGNNDVAQLQPNPFFDFN----PEVNPIVKSEELSLVDGGLDGQNLPLLPLLQQSRKVDVIFAVDSSADSQN-FPNGTALVATYERALKGKFNSKFSFP 195
                 ******************....8899**********************************************.9***************8888888*** PP

      PLA2_B 364 yvpdqntfvnlgLnkrptffGcDarnltdlsatvdestpPlvvylpnekysylsnlstfklsykdseregliengfeaatqdnetdddefaacvacaii 462
                  +pdqntfvnlgLnkrptffGcDa+n+t          +Pl+vy+pn+kys+ sn+stf+ +yk+s r+++i+ng+  +t +n t d+ + ac++ca +
  KHJ31640.1 196 SIPDQNTFVNLGLNKRPTFFGCDASNVTGD--------APLIVYIPNSKYSAASNISTFQSEYKTSFRNKMIQNGYDFSTGKNGTVDPLWPACMGCATL 286
                 ****************************99........9************************************************************ PP

      PLA2_B 463 rRklerknltlpsecekcFedycwngtvd 491
                 +R++ r+ ++ p++c+kcF+ ycwngt+d
  KHJ31640.1 287 SRSMTRTKAPIPAACQKCFSSYCWNGTLD 315
                 **************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2672.85
//
Query:       KHJ31641.1  [L=1335]
Description: putative map kinase kinase kinase wis4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.2e-68  229.3   0.0    1.3e-67  227.9   0.0    1.8  1  Pkinase         Protein kinase domain
    6.4e-37  127.2   0.0    1.2e-36  126.4   0.0    1.4  1  Pkinase_Tyr     Protein tyrosine kinase
      6e-06   25.8   0.0    1.4e-05   24.5   0.0    1.6  1  Kinase-like     Kinase-like
    0.00052   18.9   0.0     0.0011   17.8   0.0    1.5  1  Pkinase_fungal  Fungal protein kinase
      0.008   15.4   0.3      0.016   14.4   0.3    1.4  1  G6PD_C          Glucose-6-phosphate dehydrogenase, C-terminal
  ------ inclusion threshold ------
      0.012   15.5   0.0      0.029   14.3   0.0    1.6  1  APH             Phosphotransferase enzyme family
        0.1   12.4   0.1        0.1   12.4   0.1    3.5  4  Mer2            Mer2


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.9   0.0   5.1e-71   1.3e-67       2     264 .]    1037    1306 ..    1036    1306 .. 0.91

  Alignments for each domain:
  == domain 1  score: 227.9 bits;  conditional E-value: 5.1e-71
                  EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH..HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS-- CS
     Pkinase    2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke..kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgsls 96  
                  ++ + +G G+fG+Vy a++ ++g+ +AvK+i+ ++ +   +   +++ E+++l+ l+hpn+v +y++  + d++y+++e+++gg+l+ lle+ ++ +
  KHJ31641.1 1037 QQGQFVGGGTFGTVYAAINLDSGQLMAVKEIRLQDPSMIPTiaCQIRDEMNVLEVLDHPNVVSYYGIEVHRDKVYIFMEFCSGGSLTGLLEHGRIED 1133
                  677899***************************998887777799*********************************************9766677 PP

                  HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS............BCTTTSCGGGS-HHHHTT..SCBSHHHH CS
     Pkinase   97 eeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk............ltsfvgtseYlAPEvlke..neyskkvD 179 
                  e+ +  +a q+legl+ylH+ gi+HrD+KpeNiL++++g++K +DFG ak + ++ k             +s++gt+ Y++PEv+k+   +   +vD
  KHJ31641.1 1134 EQVIMVYALQLLEGLAYLHESGIVHRDIKPENILLNHNGVIKYVDFGAAKVIARQGKtmivadaagakpNKSMTGTPMYMSPEVIKGeiPGRAGAVD 1230
                  778889*************************************************999***************************6522455889** PP

                  HHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase  180 vWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264 
                  +WslG++++e+ tg+ p+s+ +++   ++++      ++i + +  +lp+++++s+  +d++k+++ +dp++R +a ellqh+++
  KHJ31641.1 1231 IWSLGCVILEMATGRRPWSSLDNE---WAIM------YNIAQGNPPQLPNPDQLSPRGIDFIKRCFIRDPRTRASAPELLQHEWI 1306
                  *******************33333...3333......3455577899*************************************7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.4   0.0   4.5e-40   1.2e-36       4     256 ..    1039    1301 ..    1036    1303 .. 0.84

  Alignments for each domain:
  == domain 1  score: 126.4 bits;  conditional E-value: 4.5e-40
                   EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE...STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr    4 gkklGeGafGkVvegtlkgekekkevkVavKtl...keeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkke 96  
                   g+ +G G+fG+V+ +       ++ +  avK +   + ++  +   ++ +e+++++ l+hpn+v+++g+ +++++++i +e+++gG+L   L++  
   KHJ31641.1 1039 GQFVGGGTFGTVYAAINL----DSGQLMAVKEIrlqDPSMIPTIACQIRDEMNVLEVLDHPNVVSYYGIEVHRDKVYIFMEFCSGGSLTGLLEHG- 1129
                   6779***********999....7788899998833123344444889999****************************************99987. PP

                   TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE.........EETTSSTSGGGGS-HHHHHHSE.. CS
  Pkinase_Tyr   97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey.........vkkeeaklpvkWmapEslkekk.. 181 
                    +  + + ++ +alq+ +G++yL++  +vHrd+   N+Ll++n v+k  DfG a+ i ++ ++         + +++ +    +m+pE++k +   
   KHJ31641.1 1130 -RIEDEQVIMVYALQLLEGLAYLHESGIVHRDIKPENILLNHNGVIKYVDFGAAKVIARQGKTmivadaagaKPNKSMTGTPMYMSPEVIKGEIpg 1224
                   .55566667889*******************************************99776665565444443344455566789********9977 PP

                   EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHH.HHHHHHHTTE..ES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr  182 ftsksDvWsfGvllwEiftlgespypglkne.evleklkegk..rlekpekcpeelyelmkkcweedpeeRptfselv 256 
                      + D+Ws G ++ E++t g++p+++l+ne  ++ ++ +g+  +l++p++ +++  +++k+c+ +dp+ R++  el+
   KHJ31641.1 1225 RAGAVDIWSLGCVILEMAT-GRRPWSSLDNEwAIMYNIAQGNppQLPNPDQLSPRGIDFIKRCFIRDPRTRASAPELL 1301
                   78899**************.********7662566677777633699************************9988876 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0   5.6e-09   1.4e-05     150     257 ..    1141    1255 ..    1127    1272 .. 0.77

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 5.6e-09
  Kinase-like  150 TlqlirlaanLqakglvhgkftvdnllldekgglmlggfta...LvragtkvvlsevekgfaPpEllgsrggytrknktkmth.....kldaWqlG 237 
                    lql+   a+L++ g+vh +++++n+ll+++g ++  +f+a   + r+g+ + ++  ++g +P   +     y   +  k  +     ++d W lG
   KHJ31641.1 1141 ALQLLEGLAYLHESGIVHRDIKPENILLNHNGVIKYVDFGAakvIARQGKTMIVAD-AAGAKPNKSMTGTPMYMSPEVIKGEIpgragAVDIWSLG 1235
                   47888889****************************99987443678888887544.567788776666666777666665442222279****** PP

  Kinase-like  238 lviyriwclklPltlateea 257 
                    vi+ ++    P     +e 
   KHJ31641.1 1236 CVILEMATGRRPWSSLDNEW 1255
                   *******9988876665555 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   4.5e-07    0.0011     315     388 ..    1144    1220 ..    1130    1227 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 4.5e-07
  Pkinase_fungal  315 aIkghrsLflkagiLHrDiSenNilitdskkegerkglL..iDLDlakelsddsses.......ga...rertGTleFmaievlkg 388 
                       ++g+  L+ + gi+HrDi  +Nil++       ++g++  +D+  ak ++++  +        ga   +  tGT+ +m+ ev+kg
      KHJ31641.1 1144 LLEGLAYLH-ESGIVHRDIKPENILLN-------HNGVIkyVDFGAAKVIARQ-GKTmivadaaGAkpnKSMTGTPMYMSPEVIKG 1220
                      567889999.*****************.......3344311444445555542.222354443311444789**********9996 PP

>> G6PD_C  Glucose-6-phosphate dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.3   6.3e-06     0.016     153     263 ..     472     592 ..     464     607 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 6.3e-06
                 SBSS-EEEEEEEE---SS-SS---....--EEEEEEESS-EEEEEEEEE-SSSE.....EEEEEEHHHHTT.....---HHHHHHHHHHHT-GTTSB-H CS
      G6PD_C 153 rLnekkteiriqfkkvpsdlfkkke...rneLviriqpdeaislklnakkpgleleleeveldlsykerfk.....lpeaYerLlldvlkgdqtlFvrs 243
                 rL e+  ++r+qf k  +d  ++ +   +++++ ++q   ++ +++++ +   + + e  +l  +++++f+     + + Y +Ll   l g+++ F ++
  KHJ31641.1 472 RLIEEIIKVRLQFSKKMKDPTQQ-NlmmQEQMISQFQILLKLAIRIKQENLFISQTEEGWNLPPCIDDTFDqvvldALRFYLKLLSWKLGGNKNTFKEA 569
                 7889999******9998888822.23456677666666555555555555544656667889999999999997666678******************* PP

                 HHHHHHHHHHHHHHHHHHH...- CS
      G6PD_C 244 deveaaWkivdpileawee...e 263
                 + +e++Wk+ ++i ++++    e
  KHJ31641.1 570 EVLEQEWKFSNEIGRHLQGgdvE 592
                 *************9998655543 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.2e-05     0.029     162     197 ..    1147    1183 ..    1095    1187 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.2e-05
                  S...SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH  162 g...elptvllHgDlhpgNllvdpddgrvtGviDfedag 197 
                  g     + +++H+D++p N+l++ ++g ++  +Df+ a+
  KHJ31641.1 1147 GlayLHESGIVHRDIKPENILLN-HNGVIK-YVDFGAAK 1183
                  24446799***************.666664.56888776 PP

>> Mer2  Mer2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   1.4       1.2   3.1e+03      54     101 ..     471     519 ..     461     528 .. 0.67
   2 ?   12.4   0.1     4e-05       0.1      70     170 ..     553     654 ..     541     675 .. 0.89
   3 ?    2.5   0.8     0.043   1.1e+02      78     130 ..     792     843 ..     769     877 .. 0.67
   4 ?   -2.8   0.6       1.8   4.6e+03      90     166 ..     957    1034 ..     942    1038 .. 0.54

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.2
        Mer2  54 kenskeLlkvisklnellidlkeee.sdnskekeikdlikdLsvkienq 101
                  +  +e++kv  ++ +++ d+ +++ + ++++ + ++++ +L+++i+++
  KHJ31641.1 471 SRLIEEIIKVRLQFSKKMKDPTQQNlMMQEQMISQFQILLKLAIRIKQE 519
                 5555677777778888888777644255666666677778888888875 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 4e-05
        Mer2  70 llidlke.eesdnskekeikdlikdLsvkienqlskvskavldklkvkkhksntdtksnLtellekkeakileeidkkqtkleksvdttqelllnvnkQ 167
                 +l++ k  ++ +  ke e+ ++  + s +i + l+    +v ++ ++  hk  +  +   ++ l++k ++   e++k+ ++  +sv++ q +l   +  
  KHJ31641.1 553 KLLSWKLgGNKNTFKEAEVLEQEWKFSNEIGRHLQGGDVEVAEQFTSLTHKAFLRLHTTFERDLKRKPKETAAEVTKRYKQNLDSVRVRQRMLQRFSRD 651
                 455666438999999******************************************************************************988887 PP

        Mer2 168 led 170
                 l++
  KHJ31641.1 652 LSE 654
                 765 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.043
        Mer2  78 esdnskekeikdlikdLsvkienqlskvskavldklkvkkhksntdtksnLte 130
                 ++  ++  ++k++ ++L+  i++   k+s+ ++d ++  +++ ++   ++L +
  KHJ31641.1 792 DMVVEQRSNLKKVNMKLTE-IKKVVYKLSNLIMDSVEIVRKQTEGMDCQELIQ 843
                 5556677788888888876.888888888888888886666666666666666 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 1.8
        Mer2   90 likdLsvkien..qlskvskavldklkvkkhksntdtksnLtellekkeakileeidkkqtkleksvdttqelllnvnk 166 
                   ++ L+v++ +   +  v ++ +++  ++++  ++  + n+ +   + e + l+ + + +++  +s  ++ +   nvn 
  KHJ31641.1  957 RVEALAVQLRKvdLSRMVDDEESSRYVTEQRMIQLADIDNIRKQR-EAERQALGRVMEDSSEADRSLTYLSSSATNVNM 1034
                  445555544443211222222233333455555555555555543.344555566666667777777777777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       949  (0.052931); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.88u 0.28s 00:00:01.16 Elapsed: 00:00:00.44
# Mc/sec: 9130.31
//
Query:       KHJ31642.1  [L=510]
Description: putative maintenance of telomere capping protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.5e-167  557.6   4.3   2.9e-167  557.3   4.3    1.0  1  DUF5427   Family of unknown function (DUF5427)
     0.0044   17.2   0.2      0.015   15.5   0.2    1.9  1  Flu_M1_C  Influenza Matrix protein (M1) C-terminal domain
  ------ inclusion threshold ------
       0.34    9.5   5.4       0.64    8.6   5.4    1.5  1  Ndc1_Nup  Nucleoporin protein Ndc1-Nup


Domain annotation for each model (and alignments):
>> DUF5427  Family of unknown function (DUF5427)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  557.3   4.3  4.9e-171  2.9e-167       3     465 .]      19     497 ..      17     497 .. 0.89

  Alignments for each domain:
  == domain 1  score: 557.3 bits;  conditional E-value: 4.9e-171
     DUF5427   3 fleslpedktvkkkkkkkktkkkkkakkkdeediLaeLeeLak..kesrpaTPrvksnkskkaspkkkksaeepakeekkkeeessedkrksvestrsl 99 
                 +le+l+ed++++ ++k ++ k++k   +++e+diLaeLe+L++   +srp+TPrvk +   k       ++++++ ++++++e ++   r+ ++s++s+
  KHJ31642.1  19 MLEKLDEDTAPAPPTKGTNPKASKPPIRQAEQDILAELENLGAelSSSRPHTPRVKPSI--K-------NTTTTPIASSRTSEDQTSIPRRPGNSNQSI 108
                 7999*988855544444444444444455556*********998555*******99881..2.......23333333344333333334899******* PP

     DUF5427 100 easetpseeeseeqeaekkeeeeeeaeeeeadpiasgsgWWgsilatasaavkqaeaavkeiqtneeAkkwaeqvrgnvgalrglgdelrtralptlte 198
                 ++ +t+s++++e  ++ekk  ++++  ++++++ +s +gWWgs++ata+aavk+aeaa+keiq+neeAk+wa+qv+gnvgalr++g+++++ralpt+t+
  KHJ31642.1 109 STGNTNSNQRNELVDSEKKPLSNQNPISNSNSNSTSSTGWWGSVFATATAAVKTAEAAMKEIQQNEEAKRWADQVKGNVGALRDIGEQISSRALPTFTN 207
                 *********9999999999777777788899999999************************************************************** PP

     DUF5427 199 llktlappisshEvLqIhithDlvnypsLdplvyekFsrvmsqVeGgdllvvqrgqesterrssee.sskssagwrdgpwwrq.dskrdLnlvkGlveg 295
                 +l+tlappisshE+LqIhithD++nyp Ldpl+y  Fsrvm+qVeGgdllvvqrg+est+rr+se+ ++  +++w+dgpwwr+ ++krd+++vkGl eg
  KHJ31642.1 208 ILHTLAPPISSHERLQIHITHDFINYPPLDPLIYLPFSRVMAQVEGGDLLVVQRGHESTARRTSEIgYTGGNNSWSDGPWWREtSKKRDIGAVKGLAEG 306
                 ************************************************************9999999999*************9999************ PP

     DUF5427 296 eKLaranaesyakeyfkarggleeaakrakeelsesnpvrssdiFlaiqaisvkskk...aaeekekeesevvdeneedesvsFaivlkDivhditfit 391
                 +KL+r++aesya+eyf+++ggle+a +ra+e++sesnpvrssdiF a+qai ++ +k   + +++ +e++++v+e+  de + Fai+l+D+vh+itf+t
  KHJ31642.1 307 TKLVRVSAESYANEYFNSHGGLEKAIQRATEDVSESNPVRSSDIFFAVQAIIHDMHKdlfQGSAQVEESDNIVEEDYYDELILFAIYLHDPVHNITFHT 405
                 ********************************************************99996666677778888888889******************** PP

     DUF5427 392 vSQsfPlkWieWLdaekpktse...skeee..................elpeeieeiiesggvdPreWVaeWieegLsLavGvvAqrYVakRMGv 465
                 +SQs+P++Wi+WL+++++k++        +                  +lpeei++ i+sggvdPreWV+eWiee+LsL+ G++AqrYVa+RMGv
  KHJ31642.1 406 LSQSLPAQWIRWLETTSKKSNIsdkL---SassskssffmkeyeecrdNLPEEIADVIQSGGVDPREWVSEWIEETLSLSAGILAQRYVARRMGV 497
                 ***************97766554440...2445566788999999999**********************************************8 PP

>> Flu_M1_C  Influenza Matrix protein (M1) C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.2   2.5e-06     0.015      26      68 ..     157     199 ..     150     210 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.5e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    Flu_M1_C  26 sttakameqmagssekaeevqklaeelrqnvqvlrslGasqks 68 
                 +++ k+ e      ++ ee+++ a++++ nv++lr +G + +s
  KHJ31642.1 157 TAAVKTAEAAMKEIQQNEEAKRWADQVKGNVGALRDIGEQISS 199
                 334466666555778***********************87665 PP

>> Ndc1_Nup  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   5.4   0.00011      0.64     347     467 ..      17     155 ..       7     247 .. 0.55

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00011
    Ndc1_Nup 347 tqrinergqpapkaapskapknkasapvkelprlsksplkkkddeifgnsltaeaspkssssskegvekalsslakspgqs.psptarls......... 435
                 +q +++  + +++a+p          +++++p+ sk+p ++ +++i+++  + +a  +ss+ ++ +v+ ++++++++p +s  +   + +         
  KHJ31642.1  17 NQMLEKLDEDTAPAPP----------TKGTNPKASKPPIRQAEQDILAELENLGAELSSSRPHTPRVKPSIKNTTTTPIASsRTSEDQ-Tsiprrpgns 104
                 3444443332223333..........34455555544444445667777555556666666666666666666666666553222222.2355555555 PP

    Ndc1_Nup 436 ...........prarkllekaksrllskeqkealsestikkk...........v 467
                            ++  +l++++k+ l +   + ++s+s++++             
  KHJ31642.1 105 nqsistgntnsNQRNELVDSEKKPLSN---QNPISNSNSNSTsstgwwgsvfaT 155
                 455555555533333333333333333...222222222221334444444440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1086  (0.0605723); expected 358.6 (0.02)
Passed bias filter:                      603  (0.0336327); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.32s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 3510.55
//
Query:       KHJ31643.1  [L=607]
Description: putative calcium calmodulin-dependent protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-67  227.9   0.0    4.4e-67  226.2   0.0    1.9  1  Pkinase         Protein kinase domain
    1.7e-30  106.2   0.0    7.3e-29  100.8   0.0    2.5  1  Pkinase_Tyr     Protein tyrosine kinase
    0.00078   18.8   0.0       0.26   10.6   0.0    2.5  2  Kinase-like     Kinase-like
  ------ inclusion threshold ------
       0.11   11.3   0.3       0.21   10.5   0.3    1.3  1  NiFeSe_Hases    Nickel-dependent hydrogenase
       0.24   10.2   2.4       0.46    9.2   0.0    2.3  3  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.2   0.0   1.2e-70   4.4e-67       2     264 .]     103     407 ..     102     407 .. 0.92

  Alignments for each domain:
  == domain 1  score: 226.2 bits;  conditional E-value: 1.2e-70
                 EEEEEEEEESSEEEEEEEETTTT.EEEEEEEEECHCHCHHHH.................HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TT CS
     Pkinase   2 ekleklGeGsfGkVykaveketg.kivAvKkikkekakkkke.................kkvlrEikilkklkhpnivrlyevfeekdelylvleyveg 82 
                 + +ek+G G+f++Vy+a++ + +  +vA+K++ k ++++ +                   ++l+E++i++ l+hpni++l+++ e+++ +y++le+++g
  KHJ31643.1 103 KLIEKMGDGAFSNVYRARDLQGQfGEVAIKVVHKYEMNSIQGearlhpnfkkkpkvverANILKEVTIMRGLDHPNIIKLIDFTESEQFYYIILELAPG 201
                 5789**************86654379***********998888999999********999*************************************** PP

                 EBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHH.HTTEE-SS-SGGGEEEET.................................TTEEEE-SGTTSEE CS
     Pkinase  83 geladllerkgslseeeakkiakqilegleylH.skgiiHrDlKpeNiLide.................................kgelKitDFGlake 147
                 gel++ + r + +se+  ++++ q++++leylH +kg++HrD+KpeN+L+                                    g++Ki+DFGl+k 
  KHJ31643.1 202 GELFHQIVRLTYFSEDLSRHVIVQVARALEYLHeEKGVVHRDIKPENLLYCPiptipskilkpkapgdedkvdegefvpgvgaggIGQIKIADFGLSKI 300
                 ********9999*********************6677*************97799**************9999999998888777777*********** PP

                 SSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS-HHHHHHHHHHT CS
     Pkinase 148 lessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilg.etkeklpeaseiseeakdllkkll 245
                 + +ss +++ +gt  Y APE++++++ysk+vD+W++G++ly+ll+g ppf++e+      + l++     k+ + ++++ +p+++eis++a+dl++ ll
  KHJ31643.1 301 VWESS-TMTPCGTVGYTAPEIVRDERYSKSVDMWAMGCVLYTLLCGFPPFYDES-----IQVLTE-----KVAKgQYTFLSPWWDEISKSAQDLISHLL 388
                 **998.9********************************************222.....233444.....34334899********************* PP

                 -SSGCCSTTHHHHHTSGGG CS
     Pkinase 246 kkdpkkRltaeellqhpyl 264
                 ++dp kR+t++e l+hp++
  KHJ31643.1 389 TVDPAKRYTIKEFLAHPWI 407
                 ******************7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.8   0.0     2e-32   7.3e-29       3     255 ..     104     401 ..     102     404 .. 0.84

  Alignments for each domain:
  == domain 1  score: 100.8 bits;  conditional E-value: 2e-32
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST..................TSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE- CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlke..................eateeekeelleeakimkklkhpnivkllgvctkeepllivtey 82 
                  l +k+G Gaf++V++++     + +  +Va+K++++                  + +  e++++l+e++im+ l+hpni+kl+ +  +e+ ++i++e+
   KHJ31643.1 104 LIEKMGDGAFSNVYRARDL---QGQFGEVAIKVVHKyemnsiqgearlhpnfkkKPKVVERANILKEVTIMRGLDHPNIIKLIDFTESEQFYYIILEL 198
                  6789999999999999887...56666777777754334444444444443322334446899*********************************** PP

                  -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT.EEEST-SGGGEEEEE.................................TTEEEE-S CS
  Pkinase_Tyr  83 vkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskk.lvHrdlaarNvLlse.................................nkvvkisD 146
                  ++gG+L + + +   + ++ +   ++++qvA+++eyL+++k +vHrd+   N L +                                    ++ki+D
   KHJ31643.1 199 APGGELFHQIVRL--TYFSEDLSRHVIVQVARALEYLHEEKgVVHRDIKPENLLYCPiptipskilkpkapgdedkvdegefvpgvgaggIGQIKIAD 294
                  ******9999997..7888888899************976559*************9999****************************9888****** PP

                  TTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BB..TTSBHHHHHHHHHH CS
  Pkinase_Tyr 147 fGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevlekl.kegkrlekp..ekcpeelyelmkkc 241
                  fGL++ + +++    + +    v ++apE++++++++++ D+W+ G +l+ +++ g  p+ + + + ++ek+ k ++    p  ++++++ ++l+++ 
   KHJ31643.1 295 FGLSKIVWESS----TMTPCGTVGYTAPEIVRDERYSKSVDMWAMGCVLYTLLC-GFPPFYDESIQVLTEKVaKGQYTFLSPwwDEISKSAQDLISHL 387
                  *****994333....344556899*****************************9.*******999999999944455555544489999999****** PP

                  T-SSGGGS--HHHH CS
  Pkinase_Tyr 242 weedpeeRptfsel 255
                  ++ dp++R t++e 
   KHJ31643.1 388 LTVDPAKRYTIKEF 401
                  ********999876 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   7.1e-05      0.26     142     178 ..     216     252 ..     199     255 .. 0.87
   2 !    5.7   0.0    0.0022         8     224     251 ..     323     350 ..     304     395 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 7.1e-05
  Kinase-like 142 etiarlllTlqlirlaanLqa.kglvhgkftvdnllld 178
                  e+++r+++ +q+ r   +L++ kg+vh +++++nll+ 
   KHJ31643.1 216 EDLSRHVI-VQVARALEYLHEeKGVVHRDIKPENLLYC 252
                  7899****.**********9637************995 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0022
  Kinase-like 224 ktkmthkldaWqlGlviyriwclklPlt 251
                    +++ ++d W++G v y + c   P+ 
   KHJ31643.1 323 DERYSKSVDMWAMGCVLYTLLCGFPPFY 350
                  5578999***************988875 PP

>> NiFeSe_Hases  Nickel-dependent hydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.3   5.8e-05      0.21     241     325 ..     468     552 ..     457     584 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 5.8e-05
                   EEEEEEEESSTT-STTGGEEEEEEEESTTETTSEBEE-.TTTEEEE-TTSSBSTS-B-GGG---EB---EEE--TTSB-BSS-EEE CS
  NiFeSe_Hases 241 flsvgefpeekseelkeslllpsGvilngdlskveevd.eekitEevkhswYkekslhplegetepkytleeldeegkYswikaPr 325
                   ++ vg   ++++ee k++  l++G  +  ++++++++d e++++E+ +++ Y++++++p ++e++ +y   ++ ++++    + P+
    KHJ31643.1 468 VFDVGYAVHRQEEEVKHRKNLAGGQRVTFQFNSLNPIDdEDELEEQNDETEYSDETKTPKAKESNLQYVE-QVMRKTNLNSNRVPQ 552
                   55566655556666777778999999999********779****************************84.444444444455555 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.2     0.063   2.3e+02     239     291 ..      29      83 ..       8     158 .. 0.77
   2 ?    9.2   0.0   0.00013      0.46     312     341 ..     223     252 ..     211     332 .. 0.82
   3 ?   -3.4   0.6      0.87   3.1e+03     225     260 ..     523     530 ..     468     577 .. 0.46

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.063
  Pkinase_fungal 239 vvsssssqelsskaevklkksesskkvekrsvdssv..stskrsrlenrvhrrlv 291
                     ++s + +++l++ ++v+  +++s ++ ++r  ++sv  +++k  ++++  + rlv
      KHJ31643.1  29 LQSLVHQKPLDNVSRVADDQRRSDTPCTSRDAKTSVeqKEKKIVKIDKEDLARLV 83 
                     2333344449999999999999999999999999995333333334554444444 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00013
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilit 341
                     + ++ ++++ L++++g++HrDi  +N+l +
      KHJ31643.1 223 IVQVARALEYLHEEKGVVHRDIKPENLLYC 252
                     667788999*****************9966 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 0.87
  Pkinase_fungal 225 ldvtkaekfrskrkvvsssssqelsskaevklkkse 260
                     +++ ka                            +e
      KHJ31643.1 523 TKTPKA----------------------------KE 530
                     111111............................11 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (607 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       966  (0.0538792); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.28s 00:00:00.97 Elapsed: 00:00:00.46
# Mc/sec: 3945.76
//
Query:       KHJ31644.1  [L=679]
Description: hypothetical protein EV44_g4474 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.068   13.1   0.1       0.18   11.7   0.1    1.7  1  HetR_C    Heterocyst differentiation regulator C-terminal Hoo


Domain annotation for each model (and alignments):
>> HetR_C  Heterocyst differentiation regulator C-terminal Hood domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1     1e-05      0.18      19      54 ..     443     479 ..     430     485 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1e-05
      HetR_C  19 lmrdwaerkpkvlrvleeldippekleq.aleeldei 54 
                   r+ a++k++++r+ +++d pp k+eq a+ee d  
  KHJ31644.1 443 NFREKAKQKANAVRLADTIDSPPSKMEQkAMEESDRK 479
                 468999********************96599999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (679 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1217  (0.0678789); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 4676.27
//
Query:       KHJ31645.1  [L=388]
Description: putative nuclear envelope protein brr6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.7e-43  145.9   0.5    8.2e-43  145.4   0.5    1.2  1  Brr6_like_C_C   Di-sulfide bridge nucleocytoplasmic transport
  ------ inclusion threshold ------
      0.023   14.9   0.7       0.27   11.5   0.0    2.7  3  Chordopox_A13L  Chordopoxvirus A13L protein
      0.037   14.1   0.6       0.11   12.5   0.1    1.9  2  Neur_chan_memb  Neurotransmitter-gated ion-channel transmembr


Domain annotation for each model (and alignments):
>> Brr6_like_C_C  Di-sulfide bridge nucleocytoplasmic transport domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.4   0.5   1.4e-46   8.2e-43       2     133 .]     202     332 ..     201     332 .. 0.98

  Alignments for each domain:
  == domain 1  score: 145.4 bits;  conditional E-value: 1.4e-46
  Brr6_like_C_C   2 sylqllfnlllvllllylvisfvltikkDiekkleekkaellaeieeCkkeYeeNkCdpetrvpaleekCeewekCmnrdpeskverakvsaetla 97 
                     y+ql++nl+++ l+++ +++f++t+++D++++ e++++ +la+i++C++++  N C++++r p +e  C+e++ Cmnrdp s v+ra++sa+t+a
     KHJ31645.1 202 FYAQLTVNLFIAGLMIFGIFTFWTTVRADVDRASEQERSVALAQIAKCAHDFVLNGCASNSRPPVMEIPCNEFDLCMNRDPDS-VGRARISAHTFA 296
                    59********************************************************************************9.************ PP

  Brr6_like_C_C  98 eiinsfvepislktllfllllllivlfvsnvafgfl 133
                    +i+nsf+epis+k+++f++l+++++++v+nvafg++
     KHJ31645.1 297 QIFNSFIEPISYKAMIFIVLIIIVTIVVNNVAFGLY 332
                    *********************************976 PP

>> Chordopox_A13L  Chordopoxvirus A13L protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.2      0.39   2.3e+03      40      67 ..     165     191 ..     150     193 .. 0.54
   2 ?   -0.5   0.0      0.25   1.5e+03      12      28 ..     210     226 ..     201     242 .. 0.74
   3 ?   11.5   0.0   4.5e-05      0.27       5      33 ..     314     342 ..     311     350 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.39
  Chordopox_A13L  40 yeeedniKtgfvdkLksdhlkslykLfs 67 
                       + +n K   v+  ++  l s+++ ++
      KHJ31645.1 165 NSKTKNPK-VRVETSQPTFLASFFNYIE 191
                     22222222.2367777777888887765 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.25
  Chordopox_A13L  12 vaivglivYgiYnrkke 28 
                       i gl+++gi++  ++
      KHJ31645.1 210 LFIAGLMIFGIFTFWTT 226
                     67999******986655 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 4.5e-05
  Chordopox_A13L   5 lllliiCvaivglivYgiYnrkketqttn 33 
                     ++l+ii  ++v  + +g+Y+ k+++q+ +
      KHJ31645.1 314 IVLIIIVTIVVNNVAFGLYRSKSHSQHSP 342
                     467777788888999**********9987 PP

>> Neur_chan_memb  Neurotransmitter-gated ion-channel transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1      0.22   1.3e+03     109     109 ..     151     151 ..      43     200 .. 0.62
   2 ?   12.5   0.1   1.9e-05      0.11      64     111 ..     310     360 ..     308     378 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.22
                     - CS
  Neur_chan_memb 109 m 109
                      
      KHJ31645.1 151 Q 151
                     1 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 1.9e-05
                     HHHHHHHHHHHHHHHHHHHH...H-S-S---HHHHHHHTTHHHHHHC---- CS
  Neur_chan_memb  64 tmvfvtlsivetvfVlnvhh...rsprthtmpawvrkvfldklprllfmkr 111
                      m+f +l+i++t++V+nv++   rs+++ + ++  +       p++  m+ 
      KHJ31645.1 310 AMIFIVLIIIVTIVVNNVAFglyRSKSHSQHSPFPHLNSQGFQPWFTQMSS 360
                     5*****************998889999888777766666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1039  (0.0579508); expected 358.6 (0.02)
Passed bias filter:                      655  (0.036533); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 2753.45
//
Query:       KHJ31646.1  [L=439]
Description: putative transcriptional elongation factor iws1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-10   39.7   0.0    8.3e-10   38.5   0.0    1.7  1  Med26     TFIIS helical bundle-like domain


Domain annotation for each model (and alignments):
>> Med26  TFIIS helical bundle-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.0   4.6e-14   8.3e-10       2      53 .]     274     325 ..     273     325 .. 0.95

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 4.6e-14
                 HHHHS---....HHHHHHSHHHHHHHHHH-TTS-HHHHHHHHHHHHHHHHHH CS
       Med26   2 iLaqLeklpittetLkstgIGkvVnalrkhkhetaevktlAksLvekWkkav 53 
                 i + L klpi +e+L s+gIGkv+ +++k+k+++ e+k+ A++L+ +W++++
  KHJ31646.1 274 IFSALTKLPIEKEALLSSGIGKVILYYTKSKKPEIEIKRTAERLLGEWSRPI 325
                 6678999*99****************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       761  (0.0424452); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3129.89
//
Query:       KHJ31647.1  [L=964]
Description: putative blue-light photoreceptor pcmada1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-21   76.5   0.0    1.3e-13   51.0   0.1    3.6  3  PAS_9     PAS domain
    3.9e-17   62.3   0.0    1.5e-10   41.2   0.0    3.5  3  PAS_3     PAS fold
    9.3e-15   54.0   3.6    2.1e-14   52.8   3.6    1.6  1  GATA      GATA zinc finger
    1.7e-12   47.4   0.0    1.9e-05   24.6   0.0    3.7  3  PAS       PAS fold
    7.4e-05   22.9   0.0      0.044   13.9   0.0    3.4  3  PAS_11    PAS domain
      0.001   19.7   0.0      0.086   13.5   0.0    3.1  3  PAS_2     PAS fold
     0.0066   16.7   0.0       0.95    9.7   0.0    3.2  3  PAS_4     PAS fold


Domain annotation for each model (and alignments):
>> PAS_9  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   0.1   5.2e-17   1.3e-13      10     103 ..     363     468 ..     351     469 .. 0.80
   2 !   14.3   0.0   1.4e-05     0.037      10      97 ..     557     643 ..     548     647 .. 0.82
   3 !    6.8   0.0     0.003       7.7      10      58 ..     676     722 ..     672     749 .. 0.81

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 5.2e-17
       PAS_9  10 dgrilyaNeaalrllGyspeevlgksitdlf.............vtdpeanerlraaleqgrkkerevevvlirkngetfwvlltaspvkdd.dgelvg 94 
                 d++i+y++e +++++Gy+  e+ g++++ l+               d ++ + l++ + ++  ke ++ v+++rk g++f++ lt++p+  + d++++ 
  KHJ31647.1 363 DNPIIYVSEVFEQMTGYNQYEIKGQNCRFLQspegrvvagtkreFVDNDSVRYLKERILEK--KEAQRSVINYRKGGQPFMNILTVIPITGEdDKTIRY 459
                 679****************************966666666655544444444444444444..59************************8886888888 PP

       PAS_9  95 iivilrDit 103
                 ++++++D+ 
  KHJ31647.1 460 FVGFQIDLV 468
                 ******985 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 1.4e-05
       PAS_9  10 dgrilyaNeaalrllGyspeevlgksitdlfvtdpeanerlraaleqgrkkerevevvlirkngetfwvlltaspvkdddgelvgiiv 97 
                 +g  ly +++ +r+l y++ e++g+ ++ ++ ++++  +  r++ ++ +  + +v   ++rk+ ++ w++ + s  ++++++ + ii+
  KHJ31647.1 557 KGLFLYLSPSSRRVLEYDASELVGTALSSVC-HPSDIVSVTRELKDTSTGAPVNVVFRIRRKKSGYTWFESHGSLYIEQGKGRKCIIL 643
                 564579*************************.88888888888888888788888888999999*********999888655554444 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.003
       PAS_9  10 dgrilyaNeaalrllGyspeevlgksitdlfvtdpeanerlraaleqgr 58 
                 +g+ l+++  +++ll  sp +++g+si  l+    e+  ++r+ l   r
  KHJ31647.1 676 SGMFLFVSSNVRNLLDRSPSDLIGTSIQALM--RTESGLEFRKTLAKAR 722
                 58899**************************..6666666666665554 PP

>> PAS_3  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0    0.0016       4.2       1      22 [.     366     387 ..     366     401 .. 0.87
   2 !   41.2   0.0   5.8e-14   1.5e-10       2      81 ..     561     638 ..     560     644 .. 0.91
   3 !    9.2   0.0   0.00057       1.5       2      74 ..     680     749 ..     679     762 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0016
       PAS_3   1 iiyvserveeilGyspeellgk 22 
                 iiyvse +e+++Gy + e++g+
  KHJ31647.1 366 IIYVSEVFEQMTGYNQYEIKGQ 387
                 69*****************998 PP

  == domain 2  score: 41.2 bits;  conditional E-value: 5.8e-14
       PAS_3   2 iyvserveeilGyspeellgkveswldlvhpeDrervrealqealkkgepyegeyRirrkdGeyrwveararvi.rdengk 81 
                 +y+s++ +++l y+++el g+   + +++hp D+  v ++l++   +g+p+++ +Rirrk  +y+w+e++++ +  + +g+
  KHJ31647.1 561 LYLSPSSRRVLEYDASELVGT--ALSSVCHPSDIVSVTRELKDTS-TGAPVNVVFRIRRKKSGYTWFESHGSLYiEQGKGR 638
                 799******************..*******************996.*************************9985555555 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00057
       PAS_3   2 iyvserveeilGyspeellgkveswldlvhpeDrervrealqealkkgepyegeyRirrkdGeyrwveararv 74 
                 ++vs +v+++l+ sp++l+g+  s+  l+  e   ++r++l++a  +g  +++ + i+ k G ++  +++ ++
  KHJ31647.1 680 LFVSSNVRNLLDRSPSDLIGT--SIQALMRTESGLEFRKTLAKAR-TGIIISHKHEILGKRGLMMQAQTTLFP 749
                 79*******************..******************9885.888999999999999988777766655 PP

>> GATA  GATA zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   3.6   8.3e-18   2.1e-14       1      33 [.     876     908 ..     876     910 .. 0.97

  Alignments for each domain:
  == domain 1  score: 52.8 bits;  conditional E-value: 8.3e-18
        GATA   1 CsnCgttkTplWRrgpdgnksLCnaCGlyykkk 33 
                 C+nC+t+ Tp+WRrgp+g++ LCn+CGl+y+k+
  KHJ31647.1 876 CANCHTRVTPEWRRGPSGHRDLCNSCGLRYAKQ 908
                 ******************************996 PP

>> PAS  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   5.4e-05      0.14      23     112 ..     366     466 ..     361     467 .. 0.90
   2 !   24.6   0.0   7.4e-09   1.9e-05       6     111 ..     543     646 ..     541     648 .. 0.95
   3 !    6.0   0.0    0.0045        12      19      65 ..     675     721 ..     672     737 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.4e-05
                 EEEECHHHHHHHSSTHHHCTTSBGGGGBSTTHHH...........HHHHHHHHHHHHTT-ECCCCEEEECTTSSEEEEEEEEEEEEETTEEEE.EEEEE CS
         PAS  23 ilyvNaaaeellGlsreevlgkslldliheedda...........elaelleqlleqgeesrageisfklrdgrpihlevraspvrdaggeil.gflgv 109
                 i+yv++ +e+++G+++ e+ g++   l ++e +            + ++ l++++++++e++   i+ ++  g p+   +++ p++ ++++ + +f+g+
  KHJ31647.1 366 IIYVSEVFEQMTGYNQYEIKGQNCRFLQSPEGRVvagtkrefvdnDSVRYLKERILEKKEAQRSVINYRK-GGQPFMNILTVIPITGEDDKTIrYFVGF 463
                 89***********************999999888999999999999999999999999999999999999.****************999988677777 PP

                 EEE CS
         PAS 110 lrd 112
                   d
  KHJ31647.1 464 QID 466
                 665 PP

  == domain 2  score: 24.6 bits;  conditional E-value: 7.4e-09
                 HHHHSSSEEEEEETTSBEEEECHHHHHHHSSTHHHCTTSBGGGGBSTTHHHHHHHHHHHHHHHTT-ECCCCEEEEC..TTSSEEEEEEEEEEEEETTEE CS
         PAS   6 ileslpdpifvvDedgrilyvNaaaeellGlsreevlgkslldliheeddaelaelleqlleqgeesrageisfkl..rdgrpihlevraspvrdagge 102
                 ++e+++d + v+  +g +ly +++ ++ l ++++e++g  l+ + h+     +   +++ l++++ +  +++ f+   ++ +++++e + s +++ g+ 
  KHJ31647.1 543 LIENTDDVVHVISLKGLFLYLSPSSRRVLEYDASELVGTALSSVCHPS----DIVSVTRELKDTSTGAPVNVVFRIrrKKSGYTWFESHGSLYIEQGKG 637
                 79****************************************999999....789999999999999999999999999*****************999 PP

                 EEEEEEEEE CS
         PAS 103 ilgflgvlr 111
                 ++++++++r
  KHJ31647.1 638 RKCIILIGR 646
                 999999988 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0045
                 TTSBEEEECHHHHHHHSSTHHHCTTSBGGGGBSTTHHHHHHHHHHHH CS
         PAS  19 edgrilyvNaaaeellGlsreevlgkslldliheeddaelaelleql 65 
                  +g +l+v+++ + ll  s+++++g s+  l+ +e+  e+++ l ++
  KHJ31647.1 675 ISGMFLFVSSNVRNLLDRSPSDLIGTSIQALMRTESGLEFRKTLAKA 721
                 57999***************************999877777777665 PP

>> PAS_11  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.24   6.1e+02       8      45 ..     508     544 ..     506     555 .. 0.83
   2 !   13.9   0.0   1.7e-05     0.044      23      93 ..     566     634 ..     547     644 .. 0.83
   3 ?    3.8   0.0     0.024        62       4     103 ..     669     763 ..     666     771 .. 0.61

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.24
      PAS_11   8 ldidgkIisvDtsaLrasfslglekeelvgrsiydLch 45 
                 ld d  I + D s++ as+ +g e+ el++r++ +++ 
  KHJ31647.1 508 LDFDRSISREDVSTVLASIYAGTES-ELMRRMWDKILI 544
                 56777788889999**********9.*******98765 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 1.7e-05
      PAS_11  23 rasfslglekeelvgrsiydLchpqdlstlkshlrevissngeatsslyRLrlsqdkfvkvktksklfknq 93 
                 ++  +l +  +elvg+ +   chp d  ++++ l+++   +g+    ++R+r ++  + +    + l  +q
  KHJ31647.1 566 SSRRVLEYDASELVGTALSSVCHPSDIVSVTRELKDTS--TGAPVNVVFRIRRKKSGYTWFESHGSLYIEQ 634
                 55667889999*************************99..9************999988887777666555 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.024
      PAS_11   4 fttrldidgkIisvDtsaLrasfslglekeelvgrsiydLchpqdlstlkshlrevissngeatsslyRLrlsqdkfvkvktksklfknqksneqdfim 102
                 ++ +++i+g ++ v +  +r  +    + ++l+g+si++L+  +   + ++ l +    +g   s    +  +++ + +++t++   ++ k +++ f++
  KHJ31647.1 669 MWNKISISGMFLFVSS-NVRNLLDR--SPSDLIGTSIQALMRTESGLEFRKTLAKAR--TGIIISHKHEILGKRGLMMQAQTTLFPGDSLKGQKPTFLV 762
                 6778888899999888.44444444..4556**********9999666666665554..3333333333444555555555555555555555555555 PP

      PAS_11 103 a 103
                 a
  KHJ31647.1 763 A 763
                 5 PP

>> PAS_2  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       4.8   1.2e+04      47      68 ..     400     421 ..     363     445 .. 0.44
   2 ?    2.3   0.0      0.11   2.7e+02      32      83 ..     564     613 ..     557     633 .. 0.76
   3 !   13.5   0.0   3.4e-05     0.086      29      71 ..     680     722 ..     675     735 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 4.8
                 TTTCCCCCSECTTHHHHCCHS- CS
       PAS_2  47 lgtdlralltassaalLekals 68 
                 +  + r+ +++ s+  L++ + 
  KHJ31647.1 400 VAGTKREFVDNDSVRYLKERIL 421
                 3333344455555555555444 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.11
                 ETTHHHHCSS-CCCCTTTCCCCCSECTTHHHHCCHS-CCCHCCCCCEEEEEE CS
       PAS_2  32 SeNaaemLglteekllgtdlralltassaalLekalsareisllnpilihsr 83 
                 S   + +L+  + +l+gt l+++ ++s ++++ + l+ ++     p+ + +r
  KHJ31647.1 564 SPSSRRVLEYDASELVGTALSSVCHPSDIVSVTRELKDTSTG--APVNVVFR 613
                 6667889999999****************9999999887765..35555444 PP

  == domain 3  score: 13.5 bits;  conditional E-value: 3.4e-05
                 EEEETTHHHHCSS-CCCCTTTCCCCCSECTTHHHHCCHS-CCC CS
       PAS_2  29 lqvSeNaaemLglteekllgtdlralltassaalLekalsare 71 
                 l vS N++++L+ ++ +l+gt ++al++ +s    +k+l++++
  KHJ31647.1 680 LFVSSNVRNLLDRSPSDLIGTSIQALMRTESGLEFRKTLAKAR 722
                 669*******************************999998765 PP

>> PAS_4  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0       0.3   7.7e+02      17     100 ..     366     461 ..     356     464 .. 0.77
   2 !    9.7   0.0   0.00037      0.95       2      57 ..     545     600 ..     544     646 .. 0.85
   3 ?    1.8   0.0      0.11   2.7e+02      16      62 ..     678     724 ..     673     762 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.3
       PAS_4  17 vlyaNaaaaelfgappeellGktlaellpee............daarleralrrvlegeepiefleelllpgeerhyelrllPlrdesGevigvlv 100
                 ++y+++ ++++ g+ + e+ G+ ++ l ++e            d + ++   +r le +e++++++ ++ +g++    l+++P+  e+ ++i ++v
  KHJ31647.1 366 IIYVSEVFEQMTGYNQYEIKGQNCRFLQSPEgrvvagtkrefvDNDSVRYLKERILEKKEAQRSVINYRKGGQPFMNILTVIPITGEDDKTIRYFV 461
                 677777777777887778777777733333345666667777788888888899999999999999999988888888888999999988888776 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00037
       PAS_4   2 dslpdalavldpdgrvlyaNaaaaelfgappeellGktlaellpeedaarleralr 57 
                 +++ d+++v++  g +ly+++++++++ +++ el+G  l ++  ++d   + r l+
  KHJ31647.1 545 ENTDDVVHVISLKGLFLYLSPSSRRVLEYDASELVGTALSSVCHPSDIVSVTRELK 600
                 7899************************************9988887777776665 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.11
       PAS_4  16 rvlyaNaaaaelfgappeellGktlaellpeedaarleralrrvleg 62 
                  +l+++ + + l+ ++p +l+G + + l+ +e++ +++  l+++ +g
  KHJ31647.1 678 MFLFVSSNVRNLLDRSPSDLIGTSIQALMRTESGLEFRKTLAKARTG 724
                 57788889999999************************999998666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (964 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 6252.84
//
Query:       KHJ31648.1  [L=513]
Description: putative glutamate decarboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-80  271.2   0.0    2.8e-80  269.8   0.0    1.6  2  Pyridoxal_deC    Pyridoxal-dependent decarboxylase conserved 
    9.2e-08   31.4   0.0    1.2e-07   31.0   0.0    1.2  1  Aminotran_5      Aminotransferase class-V
  ------ inclusion threshold ------
       0.01   15.1   0.0      0.015   14.6   0.0    1.3  1  Beta_elim_lyase  Beta-eliminating lyase


Domain annotation for each model (and alignments):
>> Pyridoxal_deC  Pyridoxal-dependent decarboxylase conserved domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.12     7e+02      10      41 ..      13      44 ..       5      50 .. 0.83
   2 !  269.8   0.0   4.8e-84   2.8e-80       1     374 [.      68     437 ..      68     438 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.12
                   SSHHSSHH.HHHHHHHHHHCTGGGS--TTSTT CS
  Pyridoxal_deC 10 eaapekaesleqilediekilapgvttwhspe 41
                   ++ + +a +l+++l  ++ ++ ++v+ +++p 
     KHJ31648.1 13 AKTQSRASELDDLLRAVNPLIISFVQASDEPT 44
                   467788888*******************9996 PP

  == domain 2  score: 269.8 bits;  conditional E-value: 4.8e-84
                    TTTTGGGSCSSHHSSHH.HHHHHHHHHHCTGGGS--TTSTTBHCSSH....HHHHHHHHHHHHHT-BTSSTTTSHHHHHHHHHHHHHHHHHTT--G CS
  Pyridoxal_deC   1 PeylkrlldeaapekaesleqilediekilapgvttwhspefhkllpagnslisllgdlLadainkngftweesPaltelevvvldwlaellglpe 96 
                    Pe l+rl++ ++p++ +    +++ +ek+l++ v+tw+   ++kl+   ++  +++++l+ +  n+n+  ++ sPalt +e  + +  a+l+g   
     KHJ31648.1  68 PEMLQRLMNFELPQNGQGKSGLISTVEKVLKYSVNTWDRGFMDKLFA-STNAVGVISELVLAVLNTNVHVFKVSPALTIIEKTTAKAFAKLFGYD- 161
                    89999*********************************999999998.88899****************************************99. PP

                    GGTCCT-EEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTS.HHHHHCCEEEEEETTS-HHHHHHHHHHT-E...EEEE--BTTTBB-HHHHHHHH CS
  Pyridoxal_deC  97 eflekegggvlqvgssestllallAartkvikemkekgkelkeaeildklvlytsdqahssvekaalvlgvk...lrvipldengklrgaalekai 189
                      +  ++gg+ ++g+s s+  +++ ar +  +e k++g++       ++ vl+ts++ h+s+eka+l++g++   + +ip+d++g++++++lek i
     KHJ31648.1 162 --GP-HAGGISTQGGSASNVTSIIVARSHLYPESKKAGNA------SKRFVLFTSSNGHYSLEKASLMCGLGtdnICSIPTDDHGRMITSELEKQI 248
                    ..44.49*******************************88......78***********************9999999****************** PP

                    HHHHCTT.EEEEEEEEBS-TTT-BB--HHHHHHHHHHCT-EEEEE-TTGGGGGGSGGGGGGGTTGGGESEEEEECCCCTS--SS-EEEEESSCCGC CS
  Pyridoxal_deC 190 eedkekGlipffvvatlGttvlgaFddlkelgdicekydlwlHvDAAyaGsaficpeirhllkgieradSitvnphKlllvlldcsalivkdkeal 285
                    ++  ++  +p++v+at+Gttvlg +d   e+  ic+ky+lw+HvDA ++G +  +++++++l+g+ +adS++vnphK+++v++ cs l+  d  + 
     KHJ31648.1 249 QSSLAESKTPLYVNATAGTTVLGTYDPFVEISAICKKYNLWMHVDASWGGPVVFSRKYKNKLTGVHLADSLAVNPHKMMGVPVTCSFLLTPDLRNF 344
                    ************************************************************************************************ PP

                    HHHH-EEECCCT.TT..TTTSEECCCGSSSSSGHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTEEECS..TTBSSEEEEEE CS
  Pyridoxal_deC 286 qqalqleaeYLehed..sdvaadlgtkaiplsrrvrilklwfvlralGveglqnqirksvelakyleklirkderfeiva..evelglVcFrl 374
                    ++a++l a+YL+h++   + + dl + +++++rr ++lkl + +  +G  g+++q+++ + +a++++ l+ ++++  +v+   + +  +cF +
     KHJ31648.1 345 HKANTLPADYLFHKSnsNEEIWDLADLTLQCGRRADSLKLALSWIYYGSDGFERQVDHAFSIAAQFATLVSENSNLYLVSenPPPCLQICFYY 437
                    ************9988777899*****************************************************999994445688899976 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0     2e-11   1.2e-07      93     204 ..     206     328 ..     130     404 .. 0.80

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 2e-11
                  EETTSHGGGTHHHHHHHHHHTEEEEEEEBETTSCBEGGGHHHH-......-TTEEEEEEESBETTTTEB--HHHHHHHHHHTT-EEEEE-TTT...TT CS
  Aminotran_5  93 vteaehhanlvpwqelakrtgakvkvipldeegeldldelekll......nektklvaithvsnvtGtiqpveeigklakkkgalvlvDaaqa...vg 181
                  +++++h + l  +  ++   + ++  ip d++g++ ++elek++      ++++ +v  t+  +v+Gt +p+ ei +++kk++ +++vDa+ +   v 
   KHJ31648.1 206 TSSNGHYS-LEKASLMCGLGTDNICSIPTDDHGRMITSELEKQIqsslaeSKTPLYVNATAGTTVLGTYDPFVEISAICKKYNLWMHVDASWGgpvVF 302
                  34445555.44888888889999*********************99999888899***********************************96533366 PP

                  TS---HHHHTE...SEEEEETTTTTS CS
  Aminotran_5 182 hipidvkklgv...DflafsghKllg 204
                  +++ + k +gv   D la+  hK++g
   KHJ31648.1 303 SRKYKNKLTGVhlaDSLAVNPHKMMG 328
                  77777777775445777777788777 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   2.5e-06     0.015      53     210 ..     170     338 ..     136     412 .. 0.67

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.5e-06
                      ES-HHHHHHHHH...HHH--TTEEEEEETT........-HHHHSSTTHHHHC..C--EEEEE-EBTTTBE-HHHHHHHS--S-TTS-EEEEEEE CS
  Beta_elim_lyase  53 vpqGtaAnsill...killqrgeevivtep........ahihfdetgaiael..agvklrdlknkeaGkmdlekleaaikevgaheekiklisl 133
                      +  G a+n  ++   + +l +++++  +          +++h    +a      +  +   +++++ G m   +le+ i+   a  e    +++
       KHJ31648.1 170 TQGGSASNVTSIivaRSHLYPESKKAGNASkrfvlftsSNGHYSLEKASLMCglGTDNICSIPTDDHGRMITSELEKQIQSSLA--ESKTPLYV 261
                      4445555544444454455444443333334444444444444333333222114444555666666**************777..55555566 PP

                      ESSBTTTTTB--.-HHHHHHHHHHHHHCT-EEEEEETTHHHHHHHHTS-CHHHH..TTSSEEEEESSSTT--SS-.EEEEE CS
  Beta_elim_lyase 134 tvTnntagGqvv.sleelrevaaiakkygiplhlDgARfanaakslgeivkemf..syvDsvtmslkKdllanvG.gvlaf 210
                        T  t   +v+ + +   e++ai+kky++ +h+D+  +   ++ ++    +++    +Ds+ +   K ++++v  ++l++
       KHJ31648.1 262 NATAGT---TVLgTYDPFVEISAICKKYNLWMHVDAS-WGGPVVFSRKYKNKLTgvHLADSLAVNPHKMMGVPVTcSFLLT 338
                      666555...333268999*****************86.5555566666666665556677777777777777776555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (513 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3693.14
//
Query:       KHJ31649.1  [L=1192]
Description: putative myb and hsa domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      6e-12   45.6   0.7      6e-12   45.6   0.7    2.4  2  Myb_DNA-bind_6   Myb-like DNA-binding domain
    4.9e-08   33.2   0.7    4.9e-08   33.2   0.7    3.4  2  HSA              HSA
      0.001   19.2   1.2     0.0032   17.6   1.2    1.9  1  Myb_DNA-binding  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1      0.76   4.5e+03      17      27 ..     715     726 ..     708     748 .. 0.54
   2 !   45.6   0.7     1e-15     6e-12       1      58 [.     956    1027 ..     956    1029 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.76
  Myb_DNA-bind_6  17 gndWknI.aeal 27 
                     +++Wk+I +  +
      KHJ31649.1 715 EYKWKKIiSANM 726
                     568888852223 PP

  == domain 2  score: 45.6 bits;  conditional E-value: 1e-15
  Myb_DNA-bind_6    1 WteeEdeiLlklvekygndWknIaealn............rRtpkqcfdrwkn..kLrpkisrkkwskeedi 58  
                      Wt +Ed++L  lv++y+++W++I+++l             rRtp++cf+rw++  +L+ +++++ +++ +++
      KHJ31649.1  956 WTWDEDKELKVLVRDYTYNWSLISSILTsksksdlatgaeRRTPWECFERWIEleGLPGDMQKTYYFRLYTS 1027
                      ***************************779***********************8888999999988887766 PP

>> HSA  HSA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.7   8.2e-12   4.9e-08       2      55 ..     689     741 ..     688     749 .. 0.88
   2 ?    0.5   2.8      0.13   7.6e+02       5      37 ..    1063    1100 ..    1060    1106 .. 0.67

  Alignments for each domain:
  == domain 1  score: 33.2 bits;  conditional E-value: 8.2e-12
                 XXXXXXXX--HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH--XXXXX CS
         HSA   2 qeperrqkthhdylLeeilwhakdfkeerkskrakakklaravakyhnniekee 55 
                 +ep r  +th+d l+ e+ w+++dfkee k+k+   + +a a+a + +  + + 
  KHJ31649.1 689 IEPTR-SRTHRDILIHEAFWMRTDFKEEYKWKKIISANMANACAEWVSSSKEKR 741
                 68999.**************************9999999999999988766554 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.13
                  XXXXX--HHHHHHHTTHHHHHH.....HHHHHHHHHHH CS
         HSA    5 errqkthhdylLeeilwhakdf.....keerkskraka 37  
                  err++++h  l++ +  +ak       k+ + +++a +
  KHJ31649.1 1063 ERRRNQKHLILIDTMRKLAKKRetiiqKQQHAANMAAM 1100
                  8999**********999998632222234444444444 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   1.2   5.3e-07    0.0032       2      42 ..     954    1006 ..     953    1009 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 5.3e-07
                       SSSBHHHHHHHHHHHHHHTTCHHHHHHHHTS............S-HHHHHHHH CS
  Myb_DNA-binding    2 gkWteeEdelLleavkkhGnrWkkIaerlgg............Rtekqcrsrw 42  
                       ++Wt +Ed+ L  +v+ +  +W++I++ l +            Rt+ +c +rw
       KHJ31649.1  954 SQWTWDEDKELKVLVRDYTYNWSLISSILTSksksdlatgaerRTPWECFERW 1006
                       58*************************99965566677777777777777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1647  (0.0918623); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.81u 0.28s 00:00:01.09 Elapsed: 00:00:00.45
# Mc/sec: 7954.75
//
Query:       KHJ31650.1  [L=198]
Description: hypothetical protein EV44_g2142 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-09   38.1   0.0    4.7e-09   36.4   0.0    1.8  1  BolA      BolA-like protein


Domain annotation for each model (and alignments):
>> BolA  BolA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.0   2.6e-13   4.7e-09       2      72 ..     135     196 ..     134     198 .] 0.90

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 2.6e-13
        BolA   2 tealkpehlevedeShkhaghaeaggetHFkvvivseaFegkslvarhRlvyalLkeelakgiHALslktk 72 
                  ++l+p++l+v+d S        +g+++ + ++ivs +F+g++lv++++lvy +L++++++  H + +kt 
  KHJ31650.1 135 VQELEPTFLDVQDIS--------GGCGSTYAIEIVSYRFSGLTLVKQQKLVYVALRDMIKE-WHGVRIKTS 196
                 578888888888887........578999******************************99.9***99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       517  (0.028836); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1471.92
//
Query:       KHJ31651.1  [L=987]
Description: putative dna repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.4e-68  229.3   0.5      2e-65  220.8   0.5    3.2  1  SNF2_N      SNF2 family N-terminal domain
    9.2e-17   61.4   0.1      7e-16   58.6   0.0    2.5  2  Helicase_C  Helicase conserved C-terminal domain
    1.8e-06   28.0   0.0    9.3e-06   25.8   0.0    2.3  2  ResIII      Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.8   0.5   3.3e-69     2e-65      56     350 .]     258     564 ..     234     564 .. 0.80

  Alignments for each domain:
  == domain 1  score: 220.8 bits;  conditional E-value: 3.3e-69
                 --EEE---TTS--HHHHHHHHH...HHTTTS---.........S-EEEE--HHHHHHHHHHHHHH-.TTS-EEE--SSHHHH----------------- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  56 rGGiLaDemGLGKTvqvlalilaqrakeekdkek..krkdtlagptLivvPaslldqWeneierhv.sssalrvlvyggqkkmkkkntkvapklladyd 151
                 +GGiLaD+mGLGKT+q+++lil +++ ++ +  +  k    + + tL+v+P +l++qWe+ei+  v ss +l+++v++gq+ ++k         l++yd
  KHJ31651.1 258 KGGILADDMGLGKTLQSISLILSNKKPKDPRILAkrKLSPDVVKSTLVVAPLALIRQWESEINDKVcSSLNLKICVHHGQQ-RTK-----NFLDLKKYD 350
                 6*********************88865555555532444567889*****************97763789*********85.222.....345689*** PP

                 EEEE-HHHHHHHT........TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHTHHH CS
                 xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 152 vvittYdvlsreaelq..kkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkllqrp 248
                 vvittY++l +e   +  + +     ++w rv+lDE+ht+kn ++ka+ a+ +L++++rw+ltGTP+qn+l +l +L+ fLr++pf++ + +++ ++rp
  KHJ31651.1 351 VVITTYQILVSEFGSSneNTKVGCFGLNWYRVILDEAHTIKNRNAKATRACYSLQSEYRWCLTGTPMQNNLDELQSLITFLRIRPFDDLREWKDKIDRP 449
                 **********666555433344457899*********************************************************************** PP

                 HH.HHHHHHHHHHHTT-STTEE---GGGT................--.....S---EEEEEEEEE--HHHHHHHH....................HHHH CS
                 xx.xxxxxxxxxxxxxxxxxxxxxxxxxx................xx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 249 ie.aqaekgrsrLlqllqrlmlrrakkdv................ek.....nlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalks 325
                 ++  q +  ++rL++ l  +m rr+k+ +                +      ++ ++++e +f++ls++er++Y rl +    ++  +l      + k 
  KHJ31651.1 450 MKnGQGNLAIKRLRHYLVIFMKRRTKEILkvegalnpggkpstpgSTssvgfKITQRKVEKVFVELSPKEREFYDRLESRTGANMKEVL------SGKV 542
                 *955667789****************99988777777666555441155666899999999**************33333333322222......2233 PP

                 HH-HHH-HHHHHHHHHHHHH---XX CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 326 sskskekilelllelrqacnhpqlv 350
                 s+   +  l +ll+lrqacnhp+lv
  KHJ31651.1 543 SY---ASALVMLLRLRQACNHPKLV 564
                 33...44899************986 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.41   2.4e+03      37      73 ..     325     355 ..     302     359 .. 0.67
   2 !   58.6   0.0   1.2e-19     7e-16       2     110 ..     762     872 ..     761     873 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.41
                 HHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEES CS
  Helicase_C  37 ekkgikvavlhgelpqnereeileqfnkgesdvLiat 73 
                 ++ ++k++v+hg    ++r + + +   +++dv+i+t
  KHJ31651.1 325 SSLNLKICVHHG----QQRTKNFLDL--KKYDVVITT 355
                 334799999999....5566666666..346666665 PP

  == domain 2  score: 58.6 bits;  conditional E-value: 1.2e-19
                 HHHHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSHH CS
  Helicase_C   2 kleallellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlprnvt 98 
                 k+  l+++lk+e++++k ++f++++++l+ ++ +l k+++k+++++g++ ++ re++l++ + +++++ +L + + ++ G++++ ++ V+++++ +n+ 
  KHJ31651.1 762 KIMELMKILKNEVHEHKFIVFSQFTSMLDLIEPFLLKNDFKFTRYDGKMRNDLREASLNSLRnDNSCRvLLCSLKCGSLGLNLTAATRVVILEPFWNPF 860
                 778899999*******************99888888999**********************9668888677888************************* PP

                 HHHHHHTTSSST CS
  Helicase_C  99 syiqriGRtgRa 110
                    q+i+R++R 
  KHJ31651.1 861 IEEQAIDRVHRL 872
                 **********95 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   1.6e-09   9.3e-06       3     169 ..     230     416 ..     228     418 .. 0.72
   2 ?   -2.4   0.0       0.7   4.2e+03      42      65 ..     764     787 ..     730     825 .. 0.74

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 1.6e-09
                 EE-HHHHHHHHHHT...............TTSEEEEEESTTSTHHHHHHHHHHHH-S.................-EEEEESSHHHHHHHHHHGGGGTGG CS
      ResIII   3 elreyQeeaienll....eklks.....krdkrglikmaTGtGKTlvaaklierllkkgkee............kflflvprkslleqtleefkkflse 80 
                 +l ++Q+e +e ++              +  k g+++   G GKTl +++li + +k ++ +            k  ++v  ++l+ q+++e+++   +
  KHJ31651.1 230 KLLPHQIEGLEWMIgrelG---TgkkgaRVPKGGILADDMGLGKTLQSISLILSNKKPKDPRilakrklspdvvKSTLVVAPLALIRQWESEINDKVCS 325
                 5667777777766653320...23333356679999999*************98888655559***********777777779**********877666 PP

                 ....GEEEESSS-B--.......-SEEEEEHHHHHHTH........HHHTTT-S....EEEEETGGGTTS..TTTHHHHHT---SEEEEEESS- CS
      ResIII  81 aykeigkkvsgdkkkakekdstnkkilvttiqsldadseeeeeeseellrdrfd....viiiDEaHrlgak.kswreilekfkeavllglTATp 169
                   + +  + +g++++++  d ++ ++++tt+q l ++     + +e  + + f      +i DEaH ++   ++ +++  ++++ ++  lT+Tp
  KHJ31651.1 326 SLNLKICVHHGQQRTKNFLDLKKYDVVITTYQILVSEFG---SSNENTKVGCFGlnwyRVILDEAHTIKNRnAKATRACYSLQSEYRWCLTGTP 416
                 654433333333333335788*****************3...33333334444455669*********99743666667778889999999999 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.7
                 HHHHHHH-S.....-EEEEESSHH CS
      ResIII  42 aklierllkkgkeekflflvprks 65 
                 ++l++ l+++ +e kf+++ + +s
  KHJ31651.1 764 MELMKILKNEVHEHKFIVFSQFTS 787
                 556667777777777777655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (987 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1332  (0.074293); expected 358.6 (0.02)
Passed bias filter:                      579  (0.032294); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.81u 0.25s 00:00:01.06 Elapsed: 00:00:00.43
# Mc/sec: 6927.93
//
Query:       KHJ31652.1  [L=361]
Description: putative gpi-anchored wall transfer protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-40  137.0   3.6      1e-39  136.0   3.6    1.5  1  GWT1      GWT1
  ------ inclusion threshold ------
      0.023   15.1   0.1      0.023   15.1   0.1    2.6  2  DUF4818   Domain of unknown function (DUF4818)


Domain annotation for each model (and alignments):
>> GWT1  GWT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.0   3.6   1.1e-43     1e-39       1     149 []     167     321 ..     167     321 .. 0.84

  Alignments for each domain:
  == domain 1  score: 136.0 bits;  conditional E-value: 1.1e-43
        GWT1   1 aNkEGlfsliGylaiyllgvslgkyvlkrekeaeeeekkkkkkkkesketlkllikllllsilllllllllelyvef.....vSRrlaNlpYvlwvval 94 
                 +N+EG+fs++Gylai+l+g+++g yvl+r+  +        k+ +  ++  +ll  l  +s++++ll + ++++ ++     vSRrlaNlpY+lw++a+
  KHJ31652.1 167 MNREGVFSFVGYLAIFLIGQETGLYVLPRRLLQ--------KRFSAWQQRKRLLLYLGGASLAWILL-FKTTTNRNYglnmtVSRRLANLPYILWIAAF 256
                 7**************************887642........23344444556666666666666666.44444444456678***************** PP

        GWT1  95 nltllllflliel.lfv.........ekeeekerkekatstvleainrngLlvFLlaNlltGlvN 149
                 n+++l++f+lie+ +f+         ++ ee+  ++ ats +lea+nrngL+vFLlaN+ltG+vN
  KHJ31652.1 257 NTSQLTAFCLIETfFFPdvwgvsehiTEIEEEVIYHYATSGILEAYNRNGLAVFLLANVLTGAVN 321
                 *************6666*******999999999*******************************9 PP

>> DUF4818  Domain of unknown function (DUF4818)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.1   2.6e-06     0.023       9      48 ..       2      41 ..       1      47 [. 0.92
   2 ?   -1.4   2.0      0.36   3.2e+03      71      86 ..     317     334 ..     250     357 .. 0.55

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.6e-06
     DUF4818  9 lfllavlllladvrllPrrlkemsallsllvEllvsilll 48
                l++ ++  l  d++++Prr+ ++  +   l+++ v+ ++ 
  KHJ31652.1  2 LVITCISILAIDFHIFPRRFAKVETWGTSLMDVGVGSFVF 41
                8999*******************************99986 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.36
     DUF4818  71 l..qlllvseqtylaley 86 
                      l+vs  ++++l+ 
  KHJ31652.1 317 TgaVNLSVSTLYCSNLKA 334
                 122234444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       467  (0.0260472); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2612.60
//
Query:       KHJ31653.1  [L=389]
Description: hypothetical protein EV44_g0582 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.2e-17   61.6   0.1    1.9e-16   60.6   0.1    1.6  1  GPI-anchored    Ser-Thr-rich glycosyl-phosphatidyl-inositol-a
    0.00093   19.0   0.0     0.0019   18.0   0.0    1.5  1  DUF4448         Protein of unknown function (DUF4448)
  ------ inclusion threshold ------
       0.45    9.9   1.9       0.61    9.4   1.9    1.3  1  Plasmodium_Vir  Plasmodium vivax Vir protein
       0.74    8.0   6.2       0.94    7.6   6.2    1.1  1  Nop14           Nop14-like family
        1.7    8.0   5.3        2.3    7.6   5.3    1.2  1  SDA1            SDA1
        1.8    7.7  14.2        2.9    7.0  14.2    1.3  1  SOG2            RAM signalling pathway protein
        9.2    4.2  16.4         12    3.8  16.4    1.1  1  DNA_pol_phi     DNA polymerase phi


Domain annotation for each model (and alignments):
>> GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.6   0.1   7.5e-20   1.9e-16       2      93 .]      29     122 ..      28     122 .. 0.93

  Alignments for each domain:
  == domain 1  score: 60.6 bits;  conditional E-value: 7.5e-20
  GPI-anchored   2 sPssgevvtagkpvtitWkdsgtdp.gtvtlvLcagss.nnlksvktiasgiknsdgsytwtvpaslesggaYflqivsesnegiynySdrFti 93 
                   +P+ ++++ ag++++itW++ ++ +  t++++L++g+s n++++  ++as+i+ ++g +tw+vp s+++++ Y l+++ ++neg+++ S+ F+i
    KHJ31653.1  29 TPTPDQDIRAGQNFDITWQPANAPDgATISIKLLQGQSiNSMQDGPNVASNIPANAGRFTWSVPRSIQDNEVYSLKMTLDGNEGTFQNSPFFEI 122
                   79******************8844469***********777************999**********************999999******9987 PP

>> DUF4448  Protein of unknown function (DUF4448)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   7.4e-07    0.0019      24     108 ..      24     103 ..      18     148 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 7.4e-07
     DUF4448  24 sePFCtPkegselkvgktYyiTWdprfFdekenekVkihlsyvkestkekglkksffssdwlpnsdGfypltvdeewlkgkkser 108
                 ++PF tP+ ++++++g+   iTW p     ++ +++ i+l   ++  + ++        +++p++ G ++++v +++ +++ ++ 
  KHJ31653.1  24 FNPFITPTPDQDIRAGQNFDITWQPANA--PDGATISIKLLQGQSINSMQD--GPNV-ASNIPANAGRFTWSVPRSIQDNEVYSL 103
                 58************************77..999999998877666555542..3334.456***************999986643 PP

>> Plasmodium_Vir  Plasmodium vivax Vir protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.9   0.00024      0.61     219     320 ..     287     388 ..     204     389 .] 0.82

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00024
  Plasmodium_Vir 219 k...qekaaeapellnkekaeqgksekslgseslssekpearkgveeqlvhaltsassgtgndaspesiansssslesvseelssnfirniimaa 310
                     +   +  a++ap+++++  + +++ +++++s+++ss+ + ++++  +  ++a+++  s   +++sp+  + s+s+  + ++++   +++ ++ a 
      KHJ31653.1 287 AppaAPGAKSAPNSAQPPYSTPNNATTTNQSKAQSSAGAPPKSKSTGAAASAASPPKS---KSTSPAASGYSPSYPPKPTNISGAASLTIHSLAF 378
                     144477788999***********************99999998876666666666555...8999999999999999999999999999999999 PP

  Plasmodium_Vir 311 ailgtgiflf 320
                      i gt+i+l+
      KHJ31653.1 379 IIVGTAILLI 388
                     9999999997 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   6.2   0.00037      0.94     353     403 ..     196     257 ..     185     323 .. 0.47

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00037
       Nop14 353 ddfeedddlveseseeeeeeeeedeeeeedeeeeeeeeededdlsdlese...........e 403
                 dd+++dd+ ++++ ++++  +++d  +++d  +++++++d+dd ++ +              
  KHJ31653.1 196 DDDDDDDRFDDDRFDDDDRFDDDDRFDDDDRFDADSDDDDDDDRHNINGAippiasipkaaP 257
                 22222222222222222233344433333333333333333333332222344444433322 PP

>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   5.3   0.00089       2.3      92     154 ..     197     239 ..     185     345 .. 0.48

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00089
        SDA1  92 eedsddeddeedwevesdddseedseggwidvesdeeeieesdesedeeeeeeeeeekeekee 154
                 ++   d+dd  d++                   +d+++ +++d+ +d++  + +++++++++ 
  KHJ31653.1 197 DD---DDDDRFDDDRF-----------------DDDDRFDDDDRFDDDDRFDADSDDDDDDDR 239
                 11...11111111111.................111222222222222222211111111111 PP

>> SOG2  RAM signalling pathway protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0  14.2    0.0011       2.9     254     345 ..     265     355 ..     227     387 .. 0.43

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0011
        SOG2 254 aspaangaqsetsersasssg.vqssasstPlgegstsp...p..galsrqslsttgststltsssksrsssrsntnasastprslattpappasaes 345
                 ++  ++ aq+++s   +s+ +  +  ++  P+ ++++++   p     +++++++++++s+    +ks+s+ ++   ++as+p+s++t+pa  as+ s
  KHJ31653.1 265 SNGVPKSAQNTPS---SSNGNaPPVAPPAAPGAKSAPNSaqpPysTPNNATTTNQSKAQSSAGAPPKSKSTGAA--ASAASPPKSKSTSPA--ASGYS 355
                 1111111111111...1111112233333333222222211111011112222233334444444444443333..455777888887777..55555 PP

>> DNA_pol_phi  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8  16.4    0.0048        12     643     685 ..     196     238 ..     185     264 .. 0.46

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.0048
  DNA_pol_phi 643 edeeddeeeeeeddeededseedddeeesdedeededdedvde 685
                  +d++dd+  +++  ++d+  ++dd  +++d  + d+dd+d+d+
   KHJ31653.1 196 DDDDDDDRFDDDRFDDDDRFDDDDRFDDDDRFDADSDDDDDDD 238
                  2222222222222222222222222222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       830  (0.0462937); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        34  (0.00189637); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.82u 0.30s 00:00:01.11 Elapsed: 00:00:00.48
# Mc/sec: 2431.21
//
Query:       KHJ31654.1  [L=451]
Description: putative c3hc zinc finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-41  141.2   5.6    7.6e-36  123.1   2.1    2.3  2  zf-C3HC   C3HC zinc finger-like
      3e-26   91.4   0.6    1.1e-25   89.6   0.2    2.2  2  Rsm1      Rsm1-like
     0.0009   19.9   1.1        0.5   11.1   0.2    2.5  2  BIR       Inhibitor of Apoptosis domain
  ------ inclusion threshold ------
       0.19   12.3   3.1       0.16   12.6   0.4    2.0  2  PEHE      PEHE domain


Domain annotation for each model (and alignments):
>> zf-C3HC  C3HC zinc finger-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.1   2.1   1.7e-39   7.6e-36       1     130 [.      92     229 ..      92     232 .. 0.97
   2 !   19.4   0.1   1.8e-07   0.00083      30     127 ..     273     383 ..     264     389 .. 0.69

  Alignments for each domain:
  == domain 1  score: 123.1 bits;  conditional E-value: 1.7e-39
     zf-C3HC   1 pwdredllrRlkTfkalk.WtskpselselkcAkrGWkcvskdrlkCevCgaslvlkl.......ksseeesdeqlnkklaekylkqlveaHeenClWr 91 
                 pwdre++l+RlkTf++   Wt+kp  ++e+++AkrGW+c++ +r++C++C  ++v+kl       k++++  ++  +k+l+eky++ +v++H++nClWr
  KHJ31654.1  92 PWDREQFLKRLKTFSSIShWTPKPAPVNEVEWAKRGWICQKFERVRCCSCDVEIVVKLnrkeidgKEEPVYMAHVIEKALVEKYVQLIVTSHKKNCLWR 190
                 8***************999*********************************************99999****************************** PP

     zf-C3HC  92 nkecpesleslplakpeellsdlkkrldellqladklps 130
                 +++c++s+++l l++p++++++lk r+del   +++lp+
  KHJ31654.1 191 KRGCDDSIFRLNLNQPSSTIKNLKIRYDELKLCSENLPY 229
                 *****************************9988888886 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 1.8e-07
     zf-C3HC  30 kcAkrGWkcvs.......kdrlkCevCgaslvlklksseeesdeqlnkklaekylkqlveaHeenClWrnkecpesleslp.....lakp.eellsdlk 115
                  +A  GW+  +        + + C vC + l l + +s+e+s++ ++   a     ++v +H+e C+Wrn   +++  +++     l +  ++ l+ lk
  KHJ31654.1 273 TLAVFGWQGYQherlgtqPNSVSCHVCFRVLGLWIFKSKETSETGEKIRGATMNCLDVVGQHREYCPWRNAISQNGSLNTKlslseLIPGwKVVLRVLK 371
                 5788888885555667769*************9965555555554444444445556779**********98885554444344455555677777777 PP

     zf-C3HC 116 krldellqladk 127
                 +++++l q++d+
  KHJ31654.1 372 SEFSMLNQSSDA 383
                 777777776655 PP

>> Rsm1  Rsm1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       1.2   5.4e+03      50      63 ..     179     192 ..     157     205 .. 0.79
   2 !   89.6   0.2   2.4e-29   1.1e-25       1      92 []     271     371 ..     271     371 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.2
        Rsm1  50 vleeHleycPwkna 63 
                 ++++H + c w+  
  KHJ31654.1 179 IVTSHKKNCLWRKR 192
                 47889999999876 PP

  == domain 2  score: 89.6 bits;  conditional E-value: 2.4e-29
        Rsm1   1 AlalalfGWdsltssrlg....lvsCeaCfrrlGLWmfkskedgels......vvkrldvleeHleycPwknakaqkelakeseakeeeskagwellkq 89 
                 A+ la+fGW++++++rlg    +vsC++Cfr lGLW fkske++e+       +++ ldv+ +H+eycPw+na +q+++ +++ + +e    gw+++ +
  KHJ31654.1 271 AFTLAVFGWQGYQHERLGtqpnSVSCHVCFRVLGLWIFKSKETSETGekirgaTMNCLDVVGQHREYCPWRNAISQNGSLNTKLSLSELI-PGWKVVLR 368
                 89****************9999**********************8879999*999********************************998.******99 PP

        Rsm1  90 llk 92 
                 +lk
  KHJ31654.1 369 VLK 371
                 997 PP

>> BIR  Inhibitor of Apoptosis domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.2   0.00011       0.5       1      49 [.     101     145 ..     101     154 .. 0.85
   2 !    7.0   0.0     0.002       9.2      23      58 ..     274     312 ..     262     327 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00011
         BIR   1 RlatFkk..nWpeskkeakpsaeeLaeaGFyytptseskdnvqCfyCklal 49 
                 Rl+tF++  +W+   k a++++ e a+ G+++++     ++v+C  C+ ++
  KHJ31654.1 101 RLKTFSSisHWTP--KPAPVNEVEWAKRGWICQKF----ERVRCCSCDVEI 145
                 99***77545994..456899999*********99....9*******9876 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.002
         BIR  23 LaeaGFyytpts...eskdnvqCfyCklaldgweedDdp 58 
                 La  G+  ++ +   +++++v C++C + l  w  + + 
  KHJ31654.1 274 LAVFGWQGYQHErlgTQPNSVSCHVCFRVLGLWIFKSKE 312
                 55555554444455599*************999766655 PP

>> PEHE  PEHE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1      0.51   2.3e+03      70     113 ..      75     117 ..      32     140 .. 0.61
   2 ?   12.6   0.4   3.5e-05      0.16       2      86 ..     359     439 ..     359     446 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.51
        PEHE  70 grntpqpgsenpltkqppspddsesihvldevpvvasplpplsp 113
                 ++++p  gs++p+++ ++  d  ++++ l++++  ++  p+  p
  KHJ31654.1  75 SEKAP-MGSAEPTMPMYAPWDREQFLKRLKTFSSISHWTPKPAP 117
                 33333.45556666666666777777777777776655555555 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 3.5e-05
        PEHE   2 ltPsWrvvdlqslkeseeeeseiEdlSDeaFakRHaklEekerkRwdlqrnreqqrreslrqRkeskkgrntpqpgsenpltkqp 86 
                 l+P W+vv    l+  ++e s + + SD+  ++RH  lE+ er++ d    +  +r  sl   ++ +kg + +++ +e++l+kq 
  KHJ31654.1 359 LIPGWKVV----LRVLKSEFSMLNQSSDAYKSLRHDILEKGEREKKDNEIRSRLKRVRSLFIHNSTRKGTKNDTNIKEKSLSKQD 439
                 689*****....55555555546688*************9999999988888888888887776666688888888888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (451 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 3150.70
//
Query:       KHJ31655.1  [L=380]
Description: hypothetical protein EV44_g0463 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   12.1   0.1       0.33   10.8   0.1    1.7  1  MFA1_2    Mating hormone A-factor 1&2
        1.8    7.9  11.9        3.2    7.1  11.9    1.3  1  SelP_N    Selenoprotein P, N terminal region


Domain annotation for each model (and alignments):
>> MFA1_2  Mating hormone A-factor 1&2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   3.7e-05      0.33       8      24 ..     278     294 ..     273     296 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 3.7e-05
      MFA1_2   8 tqkdnssEkKDNyIvkG 24 
                  q  n ++kKDN+ +k 
  KHJ31655.1 278 FQNHNAQQKKDNFFIKT 294
                 577899********996 PP

>> SelP_N  Selenoprotein P, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  11.9   0.00036       3.2     170     223 ..     232     287 ..     205     291 .. 0.51

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.00036
      SelP_N 170 aaeekpaeaeekteheha..hshkqghkhhekhghhHkekeelsesqqeepeeeek 223
                 ++ +k ++ ++ ++++++  h h + hk +  h+hhH +k++ s++ q+++ +++k
  KHJ31655.1 232 KPCHKVTQLQDLHNQRNStpHPHPHHHKTQLLHNHHHMNKNHPSSEFQNHNAQQKK 287
                 33344444444444444411444444444555777777766666665555444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       921  (0.0513693); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 2921.99
//
Query:       KHJ31656.1  [L=277]
Description: putative bax inhibitor family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-51  174.6  28.8    2.6e-51  174.4  28.8    1.0  1  Bax1-I    Inhibitor of apoptosis-promoting Bax1
  ------ inclusion threshold ------
        2.7    8.4  15.6        5.1    7.5   6.2    3.6  3  DUF308    Short repeat of unknown function (DUF308)
        5.2    7.2  15.9       0.33   11.1   1.8    3.2  3  SPC12     Microsomal signal peptidase 12 kDa subunit (SPC12)


Domain annotation for each model (and alignments):
>> Bax1-I  Inhibitor of apoptosis-promoting Bax1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.4  28.8   4.3e-55   2.6e-51       2     207 .]      72     271 ..      71     271 .. 0.96

  Alignments for each domain:
  == domain 1  score: 174.4 bits;  conditional E-value: 4.3e-55
      Bax1-I   2 aflrkvYgllalgllltalvaavvlsspa.qlflslhivlflvvilaplalvflslsaarlkkkssalalallllftlleGlslspillvytgaiilqa 99 
                 af+rkvY++l+++l+ t++++ + ++s++ + +++ h +++++++++ +++++l +++  +k+++s+  l++l +ft+le++s+++i ++y + i+lqa
  KHJ31656.1  72 AFVRKVYAILSVQLIATTVLSSISFFSASfKYWIQSHQWMMWISLFGAIVFMLLTYWK--RKSYPSN--LIFLSGFTALEAYSVAVITSFYESRIVLQA 166
                 79***************9999999999889**********************867665..5568888..****************************** PP

      Bax1-I 100 flltaaifgglslyalttkrdlsglggflfagligliiaslvnlFlpssalelaisylgvllfsglilyDtqkiierageygeedailaalsLyldfin 198
                 ++lt+aif++l+++a++ k+d++++ ++lf gl gl++++l+  F+p++++el++s l++l+fs++il+Dtq+i++ +++++ee  i+aa+sLyld+in
  KHJ31656.1 167 VALTGAIFIALTIFACQSKYDFTSWIPYLFGGLCGLMVFGLIAAFFPGNTTELIYSGLAALIFSAYILVDTQLIMK-HHHVEEE--IAAAISLYLDIIN 262
                 ***************************************************************************8.789****..************* PP

      Bax1-I 199 lFlslLril 207
                 lFl +Lril
  KHJ31656.1 263 LFLAILRIL 271
                 *******97 PP

>> DUF308  Short repeat of unknown function (DUF308)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   1.6     0.059   3.5e+02      29      42 ..     112     125 ..      73     146 .. 0.56
   2 ?    7.5   6.2   0.00085       5.1       2      72 ..     170     234 ..     169     235 .. 0.71
   3 ?    7.5   2.6   0.00087       5.2       6      33 ..     202     229 ..     200     268 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.059
      DUF308  29 GilllvsGivqiia 42 
                  ++ l+++iv ++ 
  KHJ31656.1 112 MWISLFGAIVFMLL 125
                 34444444444444 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.00085
      DUF308   2 lGillivlGilalllPvaallalvllfGilllvsGivqiiaafaarkknrggrwlglllGilyliaGllll 72 
                 +G ++i+l i+a      +++++ +lfG l  +  ++++iaaf + + n +     + +G+  li+ +++l
  KHJ31656.1 170 TGAIFIALTIFACQSKYDFTSWIPYLFGGLCGLM-VFGLIAAF-FPG-NTTEL---IYSGLAALIFSAYIL 234
                 7999999999999999999999999999886666.44444556.244.23322...478888888888887 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.00087
      DUF308   6 livlGilalllPvaallalvllfGilll 33 
                 l+v+G++a ++P++++  +   +++l++
  KHJ31656.1 202 LMVFGLIAAFFPGNTTELIYSGLAALIF 229
                 79**************999888876654 PP

>> SPC12  Microsomal signal peptidase 12 kDa subunit (SPC12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.8   5.5e-05      0.33      10      53 ..      84     127 ..      81     138 .. 0.88
   2 ?    0.5   0.8      0.11   6.5e+02      22      51 ..     150     179 ..     140     188 .. 0.62
   3 ?    4.4   0.6    0.0066        39      18      53 ..     200     235 ..     195     247 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 5.5e-05
       SPC12  10 ekllqvilvlsaviafivGyitqdlkltlyillagvvltllvvv 53 
                 + +++++l+ +++++  + y++q+ + +++i l+g+++ +l++ 
  KHJ31656.1  84 QLIATTVLSSISFFSASFKYWIQSHQWMMWISLFGAIVFMLLTY 127
                 5688999999999999************************9985 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.11
       SPC12  22 viafivGyitqdlkltlyillagvvltllv 51 
                  +a+i+ ++ +++ l  ++l ++++++l +
  KHJ31656.1 150 SVAVITSFYESRIVLQAVALTGAIFIALTI 179
                 566777777666665555555554444443 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.0066
       SPC12  18 vlsaviafivGyitqdlkltlyillagvvltllvvv 53 
                 +  +v+++i+ ++  + + ++y +la++++++ + v
  KHJ31656.1 200 CGLMVFGLIAAFFPGNTTELIYSGLAALIFSAYILV 235
                 567899***********************9999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       843  (0.0470188); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2033.03
//
Query:       KHJ31657.1  [L=436]
Description: putative isovaleryl- dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.7e-38  130.3   0.1    1.1e-37  129.6   0.1    1.3  1  Acyl-CoA_dh_1  Acyl-CoA dehydrogenase, C-terminal domain
    5.8e-28   97.8   0.0    1.6e-27   96.4   0.0    1.7  1  Acyl-CoA_dh_N  Acyl-CoA dehydrogenase, N-terminal domain
    1.4e-26   92.5   0.1    2.5e-26   91.7   0.1    1.4  1  Acyl-CoA_dh_M  Acyl-CoA dehydrogenase, middle domain
    6.8e-13   49.1   0.0    1.1e-12   48.3   0.0    1.3  1  Acyl-CoA_dh_2  Acyl-CoA dehydrogenase, C-terminal domain
    1.4e-06   28.2   0.1    3.1e-06   27.1   0.1    1.5  1  HpaB_N         4-hydroxyphenylacetate 3-hydroxylase N termina


Domain annotation for each model (and alignments):
>> Acyl-CoA_dh_1  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.6   0.1   2.9e-41   1.1e-37       2     148 ..     281     428 ..     280     429 .. 0.97

  Alignments for each domain:
  == domain 1  score: 129.6 bits;  conditional E-value: 2.9e-41
                    BHHHHHTTTT--S-----..-SHHHHHHHHHHHHHHHTSB-CC-BGGGSHHHHHHHHHHHHHHHHHHHHHHHHHH--------.HHHHHHHHHHHH CS
  Acyl-CoA_dh_1   2 kGfrvametlnheRlavaaaalglarraleealeyarrrkafgkplidhqlvreklaemaaeleaarllvyraaealdagkpd.raeasmaKlfas 96 
                     G++v me+l+ eRl++ a+ lg++++ l+ +l + ++rk+fg p++ +qlv+ kla+m+++l+aa++ +y++a++ld+ ++  +++++ + ++a+
     KHJ31657.1 281 CGVKVLMEGLDIERLVLSAGPLGIMQSSLDISLPFTHQRKQFGAPIAHNQLVQGKLADMYTKLQAAKSFTYAVARKLDEYGQInTKDCAGTIMYAA 376
                    599***************************************************************************988877999999****** PP

                    HHHHHHHHHHHHHHGGGTTSGGGHHHHHHHHTHHHHHSSS-HHHHHHHHHHH CS
  Acyl-CoA_dh_1  97 elaqevadlamqllGgaGyleeypverlyrdarvlrigeGtseiqrniiarr 148
                    e a+e+  +++qllGg+Gy ee+p +rl+rda++++ig+Gt+ei + +i+r+
     KHJ31657.1 377 ERATECSLDCIQLLGGMGYVEEMPASRLLRDAKLYEIGAGTTEIRKIVIGRA 428
                    ***********************************************99986 PP

>> Acyl-CoA_dh_N  Acyl-CoA dehydrogenase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.4   0.0   4.4e-31   1.6e-27       3     112 ..      58     168 ..      57     169 .. 0.96

  Alignments for each domain:
  == domain 1  score: 96.4 bits;  conditional E-value: 4.4e-31
                    HHHHHHHHHHHHHHHHT.HHHHHHHHHHTSGHHHHHHHHHHTTCTSTTS-GGGTS--S-HHHHHHHHHHHHHH-HHHHHHHHHHHHTTHHHHHHHS CS
  Acyl-CoA_dh_N   3 eqealrdtvrefaeeel.aphaaewdeegefprelwkklaelGllgitvpeeygGagldyleaaivaeelaradaglalllgvhsslvapailrfG 97 
                    e  +lrd+v++f+++ + ++ aa+ d++++fp  +w++++++G+lgit  e++gG+ ++y +++iv+ee++ra+ +++l++++hs+l+++ i   G
     KHJ31657.1  58 ELNELRDRVQDFVRRVIpEEIAAKTDKSNNFPSGMWQQIGDAGFLGITADEDVGGLAMGYQAHCIVMEEISRASGSIGLSYAAHSQLCVNQIQLNG 153
                    6789*************667899999999******************************************************************* PP

                    -HHHHHHHHHHHHTT CS
  Acyl-CoA_dh_N  98 teeqkrryLpklasg 112
                    + +qk +yLp l++g
     KHJ31657.1 154 NSAQKLKYLPSLVAG 168
                    ************998 PP

>> Acyl-CoA_dh_M  Acyl-CoA dehydrogenase, middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.7   0.1   6.9e-30   2.5e-26       1      97 []     173     268 ..     173     268 .. 0.91

  Alignments for each domain:
  == domain 1  score: 91.7 bits;  conditional E-value: 6.9e-30
                    EEE---SS-SS-GGG---EEEEETT.EEEEEEEEEEEETTTT-SEEEEEEE.TS-------EEEEEEE..GGGEEE-----BSS-TTS-EEEEEEE CS
  Acyl-CoA_dh_M   1 afalTEpqaGsdvasvkttaaerdggeyvlnGeKiwitnaaiatlalvlar.tekpdrarglslflvprdapgvsvrrieeklGlrglptgelvfe 95 
                    a+a++E +aGsdv s+kt a+   +g++vlnG+K+witn+++a++++v+a+   ++  ++g++ f+v++d +g+s  r+ +k+G+rg +tgelvf+
     KHJ31657.1 173 ALAMSETGAGSDVVSMKTMAIAA-NGGFVLNGSKMWITNGPDADIMVVYAKtDPHR-SSKGITAFIVEKDFEGLSCARKLDKMGMRGSNTGELVFD 266
                    79****************55555.558************************44445.5******************9999**************** PP

                    .. CS
  Acyl-CoA_dh_M  96 dv 97 
                    +v
     KHJ31657.1 267 NV 268
                    97 PP

>> Acyl-CoA_dh_2  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.3   0.0   3.2e-16   1.1e-12       2     125 ..     296     410 ..     295     418 .. 0.91

  Alignments for each domain:
  == domain 1  score: 48.3 bits;  conditional E-value: 3.2e-16
                    HHHHHHHHHHHHHHHHHHHHHHHHHCTTT-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHH CS
  Acyl-CoA_dh_2   2 giaavalGaAraalaefvelarervrassgekladdpatqlalaeaaarldAAralleraaaraealaaagkevtvedraearraaalavelaiaa 97 
                    +++a  lG+ ++ l+  + ++++r++  +g+++a ++ +q +la++ ++l+AA+ +++++a++     ++  ++    +++ + + ++a+e+a+++
     KHJ31657.1 296 VLSAGPLGIMQSSLDISLPFTHQRKQ--FGAPIAHNQLVQGKLADMYTKLQAAKSFTYAVARK----LDEYGQI---NTKDCAGTIMYAAERATEC 382
                    677888********************..***********************************....5555555...478888899********** PP

                    HHHHHHHCGGGGGBTT-HHHHHHHHHHH CS
  Acyl-CoA_dh_2  98 vdalfeaaGgsalrkesplqRlwRDaha 125
                      +++++ Gg+++ +e p  Rl+RDa+ 
     KHJ31657.1 383 SLDCIQLLGGMGYVEEMPASRLLRDAKL 410
                    **************************87 PP

>> HpaB_N  4-hydroxyphenylacetate 3-hydroxylase N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.1   8.6e-10   3.1e-06     176     271 ..     196     276 ..     185     277 .. 0.85

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 8.6e-10
                 SSEEEEEEEEEEEE-.--SSEEEE---SS-..TTSGGG-EEEEEETT-TTEEEEE-------S..-TTT-TTTTT----EEEEEEEEEEEEGGGEE CS
      HpaB_N 176 ddGivVrGakvlaTgaaladeilvlptramlkeedkdyavafavpvdapGlklicresfedkleesefdyplssrfdendalvvfDdVfVPwerVf 271
                 + G v +G k+ +T+++ ad ++v+    +  +  ++   af+v+ d +Gl+  c ++ ++ +       ++    + n+  +vfD+VfVP e+V+
  KHJ31657.1 196 NGGFVLNGSKMWITNGPDADIMVVYAKTDP--HRSSKGITAFIVEKDFEGLS--CARKLDK-M-------GMR---GSNTGELVFDNVFVPKENVL 276
                 5699*********************99777..6799999***********98..5566555.2.......233...668889*************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       324  (0.0180713); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3257.48
//
Query:       KHJ31658.1  [L=574]
Description: putative carboxyl transferase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   8.6e-132  440.2   0.0   1.1e-131  439.9   0.0    1.1  1  Carboxyl_trans  Carboxyl transferase domain


Domain annotation for each model (and alignments):
>> Carboxyl_trans  Carboxyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  439.9   0.0  6.1e-136  1.1e-131       3     493 ..     101     571 ..      99     572 .. 0.93

  Alignments for each domain:
  == domain 1  score: 439.9 bits;  conditional E-value: 6.1e-136
                     CTTCEEEEEEEEHTTSGGGE.BEHHHHHHHHHHHHHHHHHT..EEEEEEEESBETTEEHHHHTTEEEEESSTTSGGGCEEECHHHHHHHHHTEEE CS
  Carboxyl_trans   3 hprGkltareridllldpgs.FgeledlffhrvtelgrkkklprdgvvtgsGaviGravevvaqdktvlggslgpakgekllkaqeeaikagepl 96 
                      +r +++ r+ri  l+d +s F+el+ l+ h+ + +    +lp+ g++tg+G v+G+++++va+d+tv+gg++ p++++k+l+aqe+a ++++p+
      KHJ31658.1 101 IARKRMLPRDRITSLIDTDSsFLELSVLAGHELYHQT---ELPGGGIITGVGVVEGVTCMIVANDSTVKGGTYFPITVKKHLRAQEIAQENNLPC 192
                     578899*************99**********999988...69***************************************************** PP

                     EEEEEE-ESSS.GHHSSHHHHHHHHHHHHHHHHHHH.CS-EEEEESSEEETHHHHHHHHTSEEEEETTEEEEESSTHHHHHHHHSSCC-SSCHHH CS
  Carboxyl_trans  97 igindsgGaeg.riqegveslrgsGkifgenskasg.eIpqislvtgrcaGggaYlpalgdrvimveetskifltGpdvikkvlgreevtseelg 189
                     i+++dsgGa++  + +++++++++G+if++++++s+ +Ipqis+v+g+c++ggaY+pa++d+ i v+++++ifl+Gp+++++++g e v++e+lg
      KHJ31658.1 193 IYLVDSGGANLpYQSDVFPDRDHFGRIFYNQARMSSlGIPQISVVMGPCTAGGAYVPAMSDENIIVDGQGHIFLAGPPLVEAATG-EIVSAENLG 286
                     *********7779************************************************************************.********* PP

                     HSHHHHTTTTSSSEEESSHHHHHHHHHHHHTTS-SSTTSGGSS----ECSSGSSSH.....HCS-CTTTS---HHHHHHCEECTTC-EEESTTSS CS
  Carboxyl_trans 190 GatqhmtksGvahltaeddeealelirkllsylPkkasnnresaPivetadepdrd...lieivPdnakkpyDvreviarlvdegeFlEikegyA 281
                     G+++h+++sGva+++a dd +a+ l r+ +s l+ +++ + + +  +e+     +d   li i   n +kp   +eviar+vd + F E+k++y+
      KHJ31658.1 287 GGKMHTSISGVADYLAVDDSHAIVLARRSISNLNWPKKVFSSISTYQEP----LYDteeLIGIASINLRKPISAYEVIARIVDGSVFCEFKKDYG 377
                     **********************************655554444333333....33333589********************************** PP

                     TTEEEEEEEETTEEEEEEEE--SEEETTEE-HHHHHHHHHHHHHHHHTT--EEEEE-BSEE--SHHHHHTTHHHHHHHHHHHHHT--S-EEEEE- CS
  Carboxyl_trans 282 ktvVvGfArlgGipvGvvAnetrveaGqvlfidsavKaarfirlcdaenlPlviladvrGflvGqrqeyggilkhGaklvdalaeakvPkitvil 376
                     +++V+GfA ++G  vG++An+     G +lf+ s++K a+fi+lc+++++Plv+l+++ Gf+vG++ e++gi+khGak v+a+a+++vPk+t+i 
      KHJ31658.1 378 SSLVTGFASIYGHKVGILANN-----G-ILFSTSSLKGAHFIELCCQRKIPLVFLQNISGFMVGKDSEQEGIAKHGAKFVNAVACSNVPKFTIIF 466
                     *********************.....8.******************************************************************* PP

                     TEEEHHHHHTTTGGGSTTTTEEETTT-EEESS-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSHHHHHHT CS
  Carboxyl_trans 377 rkayGGayvvmdskingadlvaawptariaVlgpegaveilfrkekaaaemerkdlaaerkkklkeyeeellnpyvaaargfaDavidpsetrak 471
                     +++yG+++++m++++++++++  wp+++i+V+g e++++++ +  k  +     +l        + +e+e ++  + +ar ++D +i+ps+tr+ 
      KHJ31658.1 467 GASYGAGNYGMCGRAYNPKFLWIWPNSKIGVMGSEQLSSVMKTVGKSFDP----EL-------GARIEKE-SEAIYSSARLWDDGIIPPSHTRRI 549
                     *****************************************999988877....22.......2233344.555667899*************** PP

                     TSSSEEEHGGGHHHHHHHHHHH CS
  Carboxyl_trans 472 lvialelewkkarklparkrrn 493
                     l   l ++ + + ++p++++++
      KHJ31658.1 550 LGLGLIAALDGKNEIPETRFGV 571
                     ***9999999999898888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 4085.66
//
Query:       KHJ31659.1  [L=171]
Description: hypothetical protein EV44_g3420 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1350.83
//
Query:       KHJ31660.1  [L=92]
Description: hypothetical protein EV44_g3730 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       280  (0.0156172); expected 358.6 (0.02)
Passed bias filter:                      237  (0.0132188); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 698.10
//
Query:       KHJ31661.1  [L=327]
Description: putative ran bp2 nzf zinc finger-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.89    8.9  10.4        2.4    7.6  10.4    1.8  1  zf-RanBP  Zn-finger in Ran binding protein and others


Domain annotation for each model (and alignments):
>> zf-RanBP  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6  10.4   0.00013       2.4       5      28 ..      21      44 ..      18      46 .. 0.92

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00013
                EE-SSS--EEESSSSB-TTT--BT CS
    zf-RanBP  5 WdCskClvqNfawstkCvaCqapk 28
                W+C++C + N  w+  Cv+C ++k
  KHJ31661.1 21 WTCPSCRAWNHFWREMCVNCLNSK 44
                ********************9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       870  (0.0485247); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2366.85
//
Query:       KHJ31662.1  [L=187]
Description: hypothetical protein EV44_g0994 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0091   15.0   0.0      0.011   14.7   0.0    1.1  1  AAA_6     Hydrolytic ATP binding site of dynein motor region


Domain annotation for each model (and alignments):
>> AAA_6  Hydrolytic ATP binding site of dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   6.2e-07     0.011     233     291 ..      31      89 ..      13     108 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 6.2e-07
       AAA_6 233 eseeelllralrdvnlpklvaeDvplfkglisdlFpgvelpesdyeeleeaieevlkek 291
                  + ++ ++r l+d+++ +++++Dv+ f+ +++d  p++el+ s+ ++  +++++ + ++
  KHJ31662.1  31 RNTSMAIYRGLKDTKVDRMTNKDVTSFSYILRDHLPNIELKGSQATQGLHTVHRPTVSS 89 
                 45678899********************************9999888777777665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       245  (0.013665); expected 358.6 (0.02)
Passed bias filter:                      217  (0.0121033); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1399.18
//
Query:       KHJ31663.1  [L=640]
Description: putative prolyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.7e-27   95.9   0.2    1.8e-25   89.9   0.0    2.3  2  tRNA-synt_2b    tRNA synthetase class II core domain (G, H, P
    3.9e-11   43.0   0.0      7e-11   42.1   0.0    1.4  1  HGTP_anticodon  Anticodon binding domain


Domain annotation for each model (and alignments):
>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.9   0.0     2e-29   1.8e-25       1     148 [.     143     476 ..     143     490 .. 0.84
   2 !    3.6   0.0    0.0063        56     160     177 ..     508     525 ..     496     526 .. 0.87

  Alignments for each domain:
  == domain 1  score: 89.9 bits;  conditional E-value: 2e-29
                   EEEEETTSEEEEE-SSSHHHHHHHHHHHEEEB.GGSSEEEEEEEEEEBTTTSTBCTTTB-SEEEEEEEEEEES.GGGHHHHHHHHHHHHHHHHHHTT CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b   1 YkledrndreyiLkPtneetfvelirdevlrs.krLPlklyqiqtkyRdEksdsrGLlRvreFhqkdgyvfha.easlddslrdlikaisriferlg 95 
                   + +edr+  +y L Pt+ee +++l++   ++s k+LPl++yqi++kyRdE++  +GL+R reF++kd y f   ++s+ + ++ + +a+s +f++l 
    KHJ31663.1 143 FHFEDRKSAKYLLSPTHEEEITSLVSGI-VKSyKELPLRVYQITRKYRDEPRPRHGLFRSREFIMKDLYTFDFcPSSALSTYHMVRTAYSSLFNELK 238
                   789***********************66.9**777****************9667******************9*********************** PP

                   .SCEEEEEEGTTSC...........................................................BTTSEEEEEEEEETT......... CS
                   xxxxxxxxxxxxxx...........................................................xxxxxxxxxxxxxxx......... RF
  tRNA-synt_2b  96 lefraiielmsaks...........................................................adykdkkefeavses......... 124
                   l++   + + +++                                                            +             s         
    KHJ31663.1 239 LPYIEAEADSGDMGgnlshefhfptlkgedhilkclhcnytaneeisetviyerpqinsnqqpnnpqtrvwrgI-------------Skdrstlinv 322
                   99888888866543445666666666666666666666666666666666666666666666666666666654.............0444444444 PP

                   ................................................................................................. CS
                   ................................................................................................. RF
  tRNA-synt_2b 125 ................................................................................................. 124
                                                                                                                    
    KHJ31663.1 323 wyesascesanresakinfhaiksaypefdpsvddalpyysenhkvckrnffrpitqivnlvdfrvpkstielinsrstqlailppsltndgnlvki 419
                   4444888888888888888888888999999999999999999999999999999999*************************************** PP

                   .................................TSEEEEEEEEEEEETHHHHHTTEE CS
                   .................................xxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b 125 .................................ltkgieigtiqklgtrlserlgat 148
                                                    + k+ie+g+ + lgtr+s  l+a+
    KHJ31663.1 420 qnildhpssgkpmnllrrqdgdpcprcthgslkIYKAIELGHTFHLGTRYSVPLQAN 476
                   ***************************************************988874 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.0063
                   EEEEEEEEHHHHHHHHHH CS
                   xxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b 160 imicaaigveRllsaile 177
                    m+c +ig++R+++a+ +
    KHJ31663.1 508 QMGCHGIGLSRMIGAVAD 525
                   59************9865 PP

>> HGTP_anticodon  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.1   0.0   7.8e-15     7e-11       3      92 ..     544     634 ..     543     636 .. 0.87

  Alignments for each domain:
  == domain 1  score: 42.1 bits;  conditional E-value: 7.8e-15
                     EEEESSSSHHHHHHHHHHHHHHHHTTT....SEEEEESSSSTHHHHHHHHHHTT-SEEEEE-HHHHHHTEEEEEETTTCEEEEEETTHHHHHHH CS
  HGTP_anticodon   3 vviplnekaeeleeyakklaeeLraag....irvelddsnesigkkireadllgipfavvvGekelekgtvtvrdrdtreqervsldelveklk 92 
                     vvi  ++   ele  a+ ++ +L+ +     i++ ldd++ s+ +k+r+adl+g+p++++vG k   ++t++v+ r+ + q +v++++l e + 
      KHJ31663.1 544 VVIISSK---ELESGAEAVYYQLNPESvkseIDIALDDRSLSFPWKLRDADLIGYPVIIIVGRKWESERTCEVQCRQLKVQSQVPISDLRENVL 634
                     3444444...688888888888887766666***********************************99*********************98775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (640 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       467  (0.0260472); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 4773.11
//
Query:       KHJ31664.1  [L=1065]
Description: putative arm repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-50  171.4   0.1    1.7e-50  171.4   0.1    2.1  2  CBF       CBF/Mak21 family


Domain annotation for each model (and alignments):
>> CBF  CBF/Mak21 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.5   0.7         1   1.8e+04     101     133 ..      83     105 ..      70     123 .. 0.41
   2 !  171.4   0.1   9.7e-55   1.7e-50       1     170 []     651     824 ..     651     824 .. 0.93

  Alignments for each domain:
  == domain 1  score: -4.5 bits;  conditional E-value: 1
         CBF 101 klkalleekfkdvkeeeeeekkeekkkskaesg 133
                 k+++         ke++ e+kk    +s+++++
  KHJ31664.1  83 KISNTAA------KESNRETKK----NSTGKRK 105
                 3333333......444322222....2222222 PP

  == domain 2  score: 171.4 bits;  conditional E-value: 9.7e-55
         CBF   1 svqaLvllfqllskqkqsellsasdRFyraLYrkLldpelltsskralllnllykalkadkpvkrvaAFvKRllqlalhappsfalgllallsellkhp 99 
                 s+qaL l+ ql+ + k+       dRFyr+LY++Lldp+l+tssk+ l+lnlly+al++d +v+rv+AF+KR++q++++++p+f++g+l+ll+el ++ 
  KHJ31664.1 651 SIQALILIEQLAIS-KNI----SVDRFYRTLYESLLDPRLITSSKHMLYLNLLYRALRSDFDVTRVKAFTKRMVQVITLHQPPFICGILYLLRELEEKF 744
                 79************.688....66*************************************************************************** PP

         CBF 100 pklkalle.........ekfkdvkeeeeeekkeekkkskaesgvYdptkrdpeysnaeasslwElsllakhfhPtValfA 170
                 p +++l           e + d+ e+++++k+++  ++++   +Yd +krdp+ysna++s+lwEl +++ hfhP+V+lfA
  KHJ31664.1 745 PGIQNLTRqpeqlesdeEVYFDIPENSDSDKEQKLMQTTNLVAKYDGKKRDPRYSNASNSCLWELIPFTTHFHPSVSLFA 824
                 *******99999999999999999887666664444444449*****99*****************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1065 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1359  (0.075799); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.78u 0.29s 00:00:01.07 Elapsed: 00:00:00.46
# Mc/sec: 7012.22
//
Query:       KHJ31665.1  [L=817]
Description: putative lim domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-23   82.7  34.3    1.2e-09   38.2   4.8    3.9  4  LIM              LIM domain
     0.0095   15.6   2.4     0.0095   15.6   2.4    3.2  4  DUF2321          Uncharacterized protein conserved in bacteri


Domain annotation for each model (and alignments):
>> LIM  LIM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   2.6   1.2e-10     1e-06       1      39 [.     597     634 ..     597     639 .. 0.91
   2 ?   -1.4   0.1      0.32   2.9e+03      47      58 .]     677     688 ..     666     688 .. 0.78
   3 !   31.0   6.7   2.4e-11   2.2e-07       1      55 [.     692     745 ..     692     748 .. 0.94
   4 !   38.2   4.8   1.4e-13   1.2e-09       1      56 [.     755     813 ..     755     815 .. 0.85

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 1.2e-10
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkeg 39 
                 C+ C+ +i++r l +   d+ +H+eCF+Cs+C++ L++ 
  KHJ31665.1 597 CHLCQLPIQNRVLKI-GTDEIFHPECFCCSTCGTGLESL 634
                 9********999997.******************99875 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.32
                 EEEEHHHHHHHC CS
         LIM  47 klyCkkdylkkf 58 
                 + yC+ d++++f
  KHJ31665.1 677 RYYCHLDFHENF 688
                 69******9875 PP

  == domain 3  score: 31.0 bits;  conditional E-value: 2.4e-11
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT..CEEETTEEEEHHHHH CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegs.fyekdgklyCkkdyl 55 
                 C+ C+ +i+ ++++  al+++wH  +F C++C+++++++  ++ +dg   C ++  
  KHJ31665.1 692 CKHCKTPIIGEHII--ALGEHWHYGHFFCAECGNPFEKDMtHIHIDGYAWCINCQT 745
                 *********99999..**********************9989999*9*99999865 PP

  == domain 4  score: 38.2 bits;  conditional E-value: 1.4e-13
                 -TTT--BE-TTTEEEEETTEEEETTTSB-TTT-SB-CTT.CEEETTE.....EEEHHHHHH CS
         LIM   1 CagCnkkiadrelvlkaldkvwHeeCFtCsdCqkeLkegsfyekdgk.....lyCkkdylk 56 
                 C++C+k ++  e+v +al+  wHe+CF+C +C+k +++gsfy k+ +     ++C ++  +
  KHJ31665.1 755 CKSCQKAVI-GEYV-RALGGEWHEQCFRCDVCEKGFDDGSFYPKQVNpsktiVLCTHCIER 813
                 *********.5555.5************************88776655568899*999865 PP

>> DUF2321  Uncharacterized protein conserved in bacteria (DUF2321)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.53   4.8e+03      66     103 ..     237     277 ..     217     291 .. 0.60
   2 ?   -2.5   0.7      0.38   3.4e+03      38      74 ..     595     629 ..     583     631 .. 0.68
   3 !   15.6   2.4   1.1e-06    0.0095      17      77 ..     668     726 ..     663     742 .. 0.79
   4 ?   -1.7   1.8      0.22   1.9e+03      28      72 ..     739     784 ..     728     789 .. 0.61

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.53
     DUF2321  66 psyCkkCgkpyPWtkakleaakeliee...leelsddekek 103
                  s C++ +++     + l++a +li +   +++l+ d k++
  KHJ31665.1 237 ASRCSNSSEALTTNGHILAGASDLIGNhhkDQDLKADVKNQ 277
                 55566767776666777777777776311133444443333 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.38
     DUF2321  38 tkcpkCsteirGkyyvegvislgk..eyevpsyC.kkCgk 74 
                  +c  C+ +i+ +     v+++g+   ++ + +C ++Cg+
  KHJ31665.1 595 VTCHLCQLPIQNR-----VLKIGTdeIFHPECFCcSTCGT 629
                 5788899999877.....5555533266666674267876 PP

  == domain 3  score: 15.6 bits;  conditional E-value: 1.1e-06
     DUF2321  17 svnkkeelveeyCe.kcGektitkcpkCsteirGkyyvegvislgkeyev.psyCkkCgkpyP 77 
                  +++ +e ++ yC+ +  e+   kc++C+t+i G+     +i lg++++    +C +Cg+p+ 
  KHJ31665.1 668 KIDDGDERNRYYCHlDFHENFAPKCKHCKTPIIGE----HIIALGEHWHYgHFFCAECGNPFE 726
                 56777888899998456788889***********9....678999977661568*******95 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 0.22
     DUF2321  28 yCekcGektit....kcpkCsteirGkyyvegvislgkeyevpsy.CkkC 72 
                 +C +c  k ++    kc++C+  + G+ yv     lg e++   + C  C
  KHJ31665.1 739 WCINCQTKRLErrapKCKSCQKAVIGE-YVRA---LGGEWHEQCFrCDVC 784
                 677777666543223788899999998.4443...455444444445555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (817 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1004  (0.0559987); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.30s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 5487.86
//
Query:       KHJ31666.1  [L=131]
Description: hypothetical protein EV44_g4365 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00048   20.3   0.0    0.00064   19.9   0.0    1.3  1  Retrotrans_gag  Retrotransposon gag protein
  ------ inclusion threshold ------
      0.067   12.8   0.1       0.77    9.4   0.0    2.3  3  HAMP_N3         HAMP N-terminal domain 3
       0.22   10.9   0.1       0.27   10.6   0.1    1.1  1  PPV_E2_N        E2 (early) protein, N terminal


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   1.1e-07   0.00064      31      84 ..      19      92 ..       3     104 .. 0.75

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 1.1e-07
  Retrotrans_gag 31 dlkkaflktflpserkdqleeelsslrQ.gtesvreYvtrfktladqldevlte.....................e 84
                     lk++f  + ++ +++  l++e++s++Q  +e +  Y+ r k+l++++ + ++e                      
      KHJ31666.1 19 ALKAEFPIQVVE-RTEGNLQQEIRSFKQlLEEPLLAYYGRPKHLLRRVYR-RDEsvqvissmivnplsplekmmlS 92
                    577788888888.99*********************************95.6665555555555555555555544 PP

>> HAMP_N3  HAMP N-terminal domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.2   6.9e+03      35      43 .]      13      21 ..      12      21 .. 0.82
   2 ?    0.5   0.0     0.077   4.6e+02      13      24 ..      32      43 ..      26      43 .. 0.79
   3 ?    9.4   0.0   0.00013      0.77       2      24 ..      88     110 ..      87     111 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.2
                HHHHHHHH- CS
     HAMP_N3 35 ieqvRgnLk 43
                +e+++ +Lk
  KHJ31666.1 13 VETLKEALK 21
                789999887 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.077
                HTS--------- CS
     HAMP_N3 13 aeGdfsadlerl 24
                 eG++ +++  +
  KHJ31666.1 32 TEGNLQQEIRSF 43
                589999998766 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00013
                 HHHHHHHHHHHHTS--------- CS
     HAMP_N3   2 kkkavavvkayaeGdfsadlerl 24 
                 k+ + ++v+a+ eG f+a+l  l
  KHJ31666.1  88 KMMLSGIVSAFVEGLFDAELRSL 110
                 89999**************9876 PP

>> PPV_E2_N  E2 (early) protein, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   4.5e-05      0.27      13      52 ..      23      62 ..      13      76 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 4.5e-05
                HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTT-S CS
    PPV_E2_N 13 eellelyekdsssLedqikywellRkEqvllyaarkkglk 52
                e  ++++e+ + +L+++i+ +++l +E +l y+ r k l 
  KHJ31666.1 23 EFPIQVVERTEGNLQQEIRSFKQLLEEPLLAYYGRPKHLL 62
                556899****************************988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       846  (0.0471861); expected 358.6 (0.02)
Passed bias filter:                      717  (0.0399911); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 946.61
//
Query:       KHJ31667.1  [L=364]
Description: putative serine threonine-protein phosphatase 2a activator 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.8e-116  388.8   0.0   2.1e-116  388.6   0.0    1.0  1  PTPA      Phosphotyrosyl phosphate activator (PTPA) protein


Domain annotation for each model (and alignments):
>> PTPA  Phosphotyrosyl phosphate activator (PTPA) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  388.6   0.0  1.2e-120  2.1e-116       1     301 []      31     363 ..      31     363 .. 0.91

  Alignments for each domain:
  == domain 1  score: 388.6 bits;  conditional E-value: 1.2e-120
                 -B----SCHHHHHHCCCHHHHHHHHHHHHHHHHHT..................T-SS-HHHHHHHHHHHHHCCCTS---SS--SSS-THHHHHHHHHHH CS
        PTPA   1 pakrileeedlekfkkSkayadilefisrlneavkgkklee..........eeeasesvekllklLdeleelideippeeqpsRfGnkafrtwhdrlee 89 
                 p k+i++++++++f +S+ay+di++fi +ln a++++k+++            e se++++l++lL++++++id++ppe++p+RfGn++fr+w++ le+
  KHJ31667.1  31 PIKKINDQSHVQSFLSSPAYHDICTFILQLNFAMCPRKTSNgkselwqldnVVEFSEPIKQLQELLKHCDAIIDQVPPETGPRRFGNVSFRKWYKILES 129
                 78*************************************4445556666668899******************************************** PP

                 HHHHHHHHHS-GGGGGG..........HHHHHHHHHTTT-BTTTTEE-HHHHHHHHHHHHHHHHTT-STT.......--HHHHHHHHHHHHHHHHHHHH CS
        PTPA  90 raeelleellpeelkkael....ekaaieelkaYlkesfGnatrlDYGtGhElsFlafllcLeklgllkeee...eedeealvlkvfekYlelvrrLqs 181
                 ++++lle ++p+++ +++     + + ++el  Yl++sfG+++rlDYGtGhElsFlafl++L+klg++ +e    e+  +++vl ++e+Yl+++rrL++
  KHJ31667.1 130 EIKSLLECYMPKSVLDCGIeannSISVLDELIPYLMGSFGDPQRLDYGTGHELSFLAFLGSLWKLGAFGKEGnenEAIARSIVLGIIEPYLRTIRRLIL 228
                 *************998877444444559****************************************7776555668899****************** PP

                 HTT-EES--------SSS-SHHHHHHHHC.............SSS-..G.....GGGG-HHHHHHHTTT-HHHHHHHHHHHH--S-HHHH-HHHHHHHC CS
        PTPA 182 tYtLepAgshGvwGLDDyqflpflfGsaQ.............lveh..kkl.kpksildaevveeyakeylYlsaiafinevKkgpfrehSpmLydisa 264
                 tY+LepAgshGvwGLDD++flp++fGs+Q                   +   kp+si +++vv++++ ++++++ai+fi +vK+gpf+ehSpmL+dis+
  KHJ31667.1 229 TYNLEPAGSHGVWGLDDHSFLPYIFGSSQycpaidskdsmpdE--GshPDApKPSSISNKAVVDKERIHNIFFAAIGFIFDVKTGPFWEHSPMLFDISG 325
                 *****************************66666666654442..05544448********************************************** PP

                 C--.HHHHHHHHHHHHHHHTTT-HHHHTT--BBSSSBS CS
        PTPA 265 vkt.WekvnkGlikmYkaevLskfpvvqhflfGsllpw 301
                 v+  W k+nkG+ikmY+ evLskfpvvqhf+fGsl++w
  KHJ31667.1 326 VRGgWGKINKGMIKMYNVEVLSKFPVVQHFPFGSLFSW 363
                 ************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (364 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       310  (0.0172904); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2514.11
//
Query:       KHJ31668.1  [L=459]
Description: putative glycoside hydrolase family 76 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.6e-153  511.6  16.3   1.8e-153  511.4  16.3    1.0  1  Glyco_hydro_76  Glycosyl hydrolase family 76
  ------ inclusion threshold ------
       0.25   10.4  11.7        2.1    7.3   5.6    2.9  2  Glyco_hydro_88  Glycosyl Hydrolase Family 88


Domain annotation for each model (and alignments):
>> Glyco_hydro_76  Glycosyl hydrolase family 76
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  511.4  16.3    2e-157  1.8e-153       1     357 [.      32     395 ..      32     406 .. 0.97

  Alignments for each domain:
  == domain 1  score: 511.4 bits;  conditional E-value: 2e-157
                     SXHHHHHHHHHHHHHHCETTECCTCTCBSCES.......-GHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHCCCTCEE-SSSTTCTCSSEHHH CS
  Glyco_hydro_76   1 siksaaatiakgllkyYkgnesggtpgnlpdp.......yywWeagalfgalidywrltgdstyndlitqallaqagenydympanqsrtegnDD 88 
                     si++aa+tia+++++yYkgn+sgg++g lp p       yywWe ga++g+lidyw++tgds+ynd+  +++++q gen+d+mp+n+s+++gnDD
      KHJ31668.1  32 SIRDAASTIAYDMMTYYKGNQSGGIVGVLPGPppdppsgYYWWESGAMWGTLIDYWHYTGDSSYNDVALKGIQWQVGENKDMMPSNWSQSMGNDD 126
                     799**************************9999999*********************************************************** PP

                     HHHHHHHHHHHHHH......H--HHHHHHHHHHHHHHHHCB-SCSCCS-BBSEC..ESS--SEEEHHHHHHHHHHHHHHHHHH--CHHHHHHHHH CS
  Glyco_hydro_76  89 qafwglaamtaaernfpep.tdepswLalAqavfntqasrwdeetcgGGlrWqiftwnsgydyknsisngplfqlaarLarytgnetYlewAekv 182
                     qafwg++a+ aae+nfp+p  ++p wLalAqavfntq++r d+e cgGGlrWq++++ +gydyknsi+ng++f+++arLaryt+n+tY+e Ae +
      KHJ31668.1 127 QAFWGMTALLAAETNFPNPpANKPGWLALAQAVFNTQSRRPDKE-CGGGLRWQVYPYLTGYDYKNSIANGCFFNIGARLARYTNNNTYAEHAETT 220
                     *******************************************8.************************************************** PP

                     HHHHHHHSCSBTTTS-B-SEEETTTCCEEEE---HHHHHHHHHHHHHHHHHHH.--HHHHHHHHHHHHHHHHHCEECTTEEEEEE-TTSTTCCTT CS
  Glyco_hydro_76 183 wdWvedvgliddedwlvyDgasvednctdinklqwtYnqGtylsgaaylynaT.gdekWldrvkgllnatlstffpdgnilyevacepsekcnnD 276
                     wdW+++vgl+ d+++++yDga++ +nctdink+q++Yn ++ l gaa +yn+T g+e+W++r++ lln+tl tffp+ +i yevacep+ +c++D
      KHJ31668.1 221 WDWIQSVGLM-DSNYNIYDGAHIGTNCTDINKVQFSYNMAVWLLGAANMYNYTnGSEVWKQRTTSLLNSTLTTFFPN-DIAYEVACEPKLTCTTD 313
                     *********9.******************************************************************.***************** PP

                     HHHHHHHHHHHHHHHH..SHHHHHHHHHHHHHHHHHHHTTTB...TTTSB-TTTTTSS.CCHHHHHHHHCCHHH........ CS
  Glyco_hydro_76 277 qrsFkgilarwlaltaqlapetadtiepllrasaeaaakscsggsdgttcglkwlkgt.wdgdaglgeqmsaleviqallve 357
                     + sFk++l+rwla+t+ +ap+t+d i+p+l+asa aaak+csg ++g+tcgl+w+kg+ wdg++g+g+qm+a+++i  +l+ 
      KHJ31668.1 314 MFSFKAYLTRWLAATTLVAPYTYDVIMPKLKASAIAAAKQCSGDTNGRTCGLSWSKGDvWDGTKGVGQQMAAMSAIFVNLLS 395
                     *******************************************************8666***************88777764 PP

>> Glyco_hydro_88  Glycosyl Hydrolase Family 88
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   5.6   0.00024       2.1      28     109 ..      73     164 ..      64     237 .. 0.63
   2 ?    4.5   0.6    0.0017        15      23      51 ..     250     278 ..     230     302 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00024
                     .HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCCCTTS-.......CTTSGGGTG.HHHHHHH..HHHHH-THHHHHHHHHHHHHHHHCS- CS
  Glyco_hydro_88  28 ewtnGvflsglleayeatgdkeyldyakawadslideggk.......telelDdid.iglllll..lyeltkderykeaaeeladyvlakpp 109
                      w+ G++++ l++++ +tgd+ y d+a +  ++++ e++        +++  Dd++  g+++ll  + +  + +  k    +la+ v+++++
      KHJ31668.1  73 WWESGAMWGTLIDYWHYTGDSSYNDVALKGIQWQVGENKDmmpsnwsQSMGNDDQAfWGMTALLaaETNFPNPPANKPGWLALAQAVFNTQS 164
                     4**************************99888888777777777776444444443133333221133333333334444444554554444 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0017
                     TTCCE.HHHHHHHHHHHHHHHHH--HHHH CS
  Glyco_hydro_88  23 kenewewtnGvflsglleayeatgdkeyl 51 
                     ++ ++ ++ +v+l g +++y++t+ +e+ 
      KHJ31668.1 250 NKVQFSYNMAVWLLGAANMYNYTNGSEVW 278
                     456788******************98854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       364  (0.0203023); expected 358.6 (0.02)
Passed bias filter:                      259  (0.0144459); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3453.48
//
Query:       KHJ31669.1  [L=176]
Description: hypothetical protein EV44_g4189 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.074   13.8   0.0       0.11   13.2   0.0    1.3  1  IMS_C     impB/mucB/samB family C-terminal domain
      0.077   12.8   0.3       0.11   12.2   0.3    1.2  1  DUF4718   Domain of unknown function (DUF4718)


Domain annotation for each model (and alignments):
>> IMS_C  impB/mucB/samB family C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.2e-05      0.11      10      76 ..      54     116 ..      51     158 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.2e-05
       IMS_C  10 sissektfpe.pyd.esk.lkkelreLaeelarrLrdkglvartitlklrysdfhasrsatLprptsdtr 76 
                 s++++k ++   yd  +k + ++lr+ +e++ ++Lr+k+  art ++k       +s+s  L+  tsd +
  KHJ31669.1  54 SYGKGKGLSNsQYDpGDKgIFNHLRHTTEKCFEDLRNKE--ARTTRVKRN-----KSKSEYLKGGTSDDD 116
                 8889999999889964447********************..899999995.....889988866555543 PP

>> DUF4718  Domain of unknown function (DUF4718)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.3   1.3e-05      0.11      81     152 ..      85     160 ..      73     170 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.3e-05
     DUF4718  81 qeekrkkeeaeikaikdhskeefcladkkviedpee.tsvaakssvatl.slstlisdsyys...qsveaaedwfsd 152
                  e+ r+ke+   +  +++sk e+     +   +p++ + v+ ++ +++l + st +++s+ s    sv++a  w+ d
  KHJ31669.1  85 FEDLRNKEARTTRVKRNKSKSEYLKGGTSDDDQPSTfAGVVINAKNSSLqNDSTILTSSFDSilnSSVDSA-RWIFD 160
                 56789******************999888888887624566666666662678888877755221556555.35555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1286.18
//
Query:       KHJ31670.1  [L=94]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       714  (0.0398237); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 698.10
//
Query:       KHJ31671.1  [L=497]
Description: putative nucleolar gtp-binding protein 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.2e-48  161.7   0.3    1.4e-47  161.1   0.3    1.3  1  NGP1NT       NGP1NT (NUC091) domain
    2.5e-17   63.0   0.0    4.7e-13   49.2   0.0    2.6  2  MMR_HSR1     50S ribosome-binding GTPase
    0.00012   21.6   0.1      0.001   18.6   0.0    2.1  2  FeoB_N       Ferrous iron transport protein B
    0.00014   22.0   0.2       0.61   10.1   0.0    3.4  3  Dynamin_N    Dynamin family
    0.00017   21.1   0.1      0.078   12.4   0.0    2.3  2  Arf          ADP-ribosylation factor family
    0.00052   20.0   0.0     0.0011   18.9   0.0    1.5  1  RsgA_GTPase  RsgA GTPase
     0.0017   18.0   0.0       0.15   11.6   0.0    3.0  3  GTP_EFTU     Elongation factor Tu GTP binding domain
  ------ inclusion threshold ------
      0.036   14.3   0.1          8    6.7   0.0    2.7  2  Roc          Ras of Complex, Roc, domain of DAPkinase
      0.097   13.0   0.0       0.68   10.3   0.0    2.3  2  AAA_16       AAA ATPase domain


Domain annotation for each model (and alignments):
>> NGP1NT  NGP1NT (NUC091) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.1   0.3   7.1e-51   1.4e-47       3     130 .]      45     177 ..      43     177 .. 0.96

  Alignments for each domain:
  == domain 1  score: 161.1 bits;  conditional E-value: 7.1e-51
      NGP1NT   3 kegkakrdkkGkiikaaalqskeasksariepdrrWFgntrvisqeaLekfreeleekvkdpysvllkrnklPmsLledkakk......kkvklletes 95 
                 ++g+++r+++Gki+k+a++qs++  ++ar+ep+r+WF+n+rvi+q+aL++fre+++e+++dpysvllk+nklPmsL++d++ +      +++ ++et++
  KHJ31671.1  45 TDGRPQRNAAGKITKSASFQSRQL-PNARVEPNRKWFTNSRVIGQDALKSFREAMAERASDPYSVLLKSNKLPMSLINDTKMEngikthAAKIAVETSP 142
                 589*********************.******************************************************9988899998788899**** PP

      NGP1NT  96 feetFgpkaqrkrpklevsdleelakkaeekaeky 130
                 f e+Fgpk+qrkr+k++vs++++l+++++++ e y
  KHJ31671.1 143 FGEVFGPKSQRKRVKMSVSSVQDLVDHSSKSYEVY 177
                 ***************************99987655 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00015      0.31      67     114 .]     225     274 ..     206     274 .. 0.74
   2 !   49.2   0.0   2.4e-16   4.7e-13       2      59 ..     331     388 ..     330     431 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00015
                 HHHHHHHHC.TSEEEEEEETTTTCSHHHHHHHHHHHHH..TTSEEEEEEES CS
    MMR_HSR1  67 gkaflalee.adlillvvdaseeklkpldeeleellee..akkplilvlnk 114
                  +++ ++++ +d++++v+da+ + +    +++e++++e   +k +i+vlnk
  KHJ31671.1 225 WNELYKVIDsSDVVIHVLDAR-DPIGTRCQSVEKYIKEeaPHKHVIFVLNK 274
                 44444555548********88.7677777888888877767888999**98 PP

  == domain 2  score: 49.2 bits;  conditional E-value: 2.4e-16
                 EEEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSS..H CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgkeielvDtpGlie..g 59 
                 ++++G+pN+GKS++in+l ++ ++ v+ +pg T+  +++++    k+i+l+D+pG++   +
  KHJ31671.1 331 IGFIGYPNTGKSSIINTLRRKkVCTVAPIPGETKVWQYITLM---KRIYLIDCPGVVPpnT 388
                 89*****************99568*****************8...68********864222 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.22   4.4e+02      77     117 ..     233     277 ..     221     293 .. 0.67
   2 !   18.6   0.0     5e-07     0.001       2      57 ..     330     383 ..     329     406 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.22
                 TSSSEEEEEEEGGGH..HHHHHHHHHHHHTT..SSEEEEEETHHH CS
      FeoB_N  77 eepdvvvnvvdatnl..ernLyLtlqllelg..vpvvlalnmide 117
                 ++ dvv++v+da      r   +   + e    ++v+ +ln++d 
  KHJ31671.1 233 DSSDVVIHVLDARDPigTRCQSVEKYIKEEAphKHVIFVLNKCDL 277
                 678999999999864223444444444443222566677777776 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 5e-07
                 EEEEEESTTSSHHHHHHHHHTTS.EEEEESTTSSSEEEEEEEEETTEEEEEEE---- CS
      FeoB_N   2 tvalvGnpnvGkttlfnaltgak.qkvgNwpGvtvekkegklklkgkeveivDlPGi 57 
                 ++ ++G pn+Gk++++n+l  +k  +v+  pG t   +  +l    k++ ++D PG+
  KHJ31671.1 330 SIGFIGYPNTGKSSIINTLRRKKvCTVAPIPGETKVWQYITL---MKRIYLIDCPGV 383
                 57899**************98873589999998755554444...599********8 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.018        35     120     167 ..     226     274 ..     196     275 .. 0.77
   2 !   10.1   0.0    0.0003      0.61       1      30 [.     331     360 ..     331     367 .. 0.89
   3 ?    3.6   0.0      0.03        60      97     120 ..     369     398 ..     362     424 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.018
                 HHHHHHHSTTEEEEEEEETTS-CCC-CHHHHHHHHSTTBTT..EEEEEE- CS
   Dynamin_N 120 elvkeyikkadiilavtsanhdlsnsealflarevdpkgkr..tivvltk 167
                 + + + i+++d++++v++a   +  ++ + +++ ++++     +i+vl+k
  KHJ31671.1 226 NELYKVIDSSDVVIHVLDARDPIG-TRCQSVEKYIKEEAPHkhVIFVLNK 274
                 778899***************998.6666666666666555558888887 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.0003
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnp 30 
                 i ++G  + GKSS++n L ++++  + p+p
  KHJ31671.1 331 IGFIGYPNTGKSSIINTLRRKKVCTVAPIP 360
                 6789999***************99988877 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.03
                 ETTS-SEEEEE---B-SSSGTTS......H CS
   Dynamin_N  97 sllvkgltlvDlPGldsvnkrdq......e 120
                   l k++ l+D PG+   n+ d+      +
  KHJ31671.1 369 ITLMKRIYLIDCPGVVPPNTSDTpqdillR 398
                 56788999*********9999987655540 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0032       6.3      71     129 ..     221     279 ..     215     298 .. 0.73
   2 !   12.4   0.0   3.9e-05     0.078       3      47 ..     317     361 ..     315     374 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0032
                 GGGGGGGGCTTE...SEEEEEEETT-CTTHHHHHHHHHHHCTSGCCTTSEEEEEEE-TTSTT CS
         Arf  71 lRplWknYfekt...davifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpe 129
                  +++W++ ++ +   d+vi+v+D+ d   + +  + +++ ++ee  ++ +++ + NK Dl  
  KHJ31671.1 221 SKRIWNELYKVIdssDVVIHVLDARD--PIGTRCQSVEKYIKEEAPHK-HVIFVLNKCDLVP 279
                 57899998876511167999999876..58888888999998877666.5556679*99864 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 3.9e-05
                 HHHHGGTT.TTEEEEEEEESTTSSHHHHHHHHHHSSCEECSSSSS CS
         Arf   3 silaklklkkkelrilllGLDnaGKtTilkklkleelvttvPTig 47 
                 + +++l++ +k++ i ++G  n+GK+ i++ l+ +++ t+ P  g
  KHJ31671.1 317 RQFSSLHSDRKQVSIGFIGYPNTGKSSIINTLRRKKVCTVAPIPG 361
                 568899999******************************999766 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   5.5e-07    0.0011      42     161 ..     261     383 ..     235     389 .. 0.68

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 5.5e-07
                  HHHTT-EEEEEEE-GGG--HHH...HHHHHHHHHHHTTSEEEE--TTTH.......TTHHHHHHHCTTSEEEEECSTTSSHHHHHHHHCTT-----S- CS
  RsgA_GTPase  42 aeekgiepvivlnKiDlleeee...eleelkeelealgyevllvsaktk.......egleelkellkdktsvlvGqSGvGKStLinallpelelktge 129
                   e+ + +++ vlnK+Dl+ ++     ++ l++e+ +l ++  ++++  k       +++++l++  k+  + ++G    GKS++in+l+ ++   ++ 
   KHJ31671.1 261 EEAPHKHVIFVLNKCDLVPTSIaasWVRYLSKEYPTLAFHASITNSFGKgsliqllRQFSSLHSDRKQVSIGFIGYPNTGKSSIINTLRRKKVCTVAP 358
                  4566678999********9988555666777777777776666655433112211122233333333334458999999************9999999 PP

                  -------------SEEEEEETTTEEEESS-SS CS
  RsgA_GTPase 130 vseklgrGkhTTtavellelaegglliDtPGf 161
                  +  +       T+  + + l +  +liD PG+
   KHJ31671.1 359 IPGE-------TKVWQYITLMKRIYLIDCPGV 383
                  9987.......566666666667777788876 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   7.4e-05      0.15      88     136 ..     229     283 ..     225     319 .. 0.80
   2 ?    1.0   0.0      0.13   2.5e+02       4      25 ..     329     350 ..     326     357 .. 0.87
   3 ?    0.8   0.0      0.15     3e+02      61      80 ..     366     383 ..     359     385 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 7.4e-05
                 HHHHHT-SEEEEEEETTTBSTHHHHHHHHHHHHTTTE..EEEEEESCGST....H CS
    GTP_EFTU  88 irglrvlDgavlvvdaveGvepqteevlrlalkegvp..iivfiNKmDrl....k 136
                 ++ +   D+++ v+da++ + ++ + v + +++e  +  +i+++NK+D +     
  KHJ31671.1 229 YKVIDSSDVVIHVLDARDPIGTRCQSVEKYIKEEAPHkhVIFVLNKCDLVptsiA 283
                 5566788**********9988888888888887766667*********9954432 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.13
                 EEEEEEESTTSSHHHHHHHHHH CS
    GTP_EFTU   4 rnigiighvDhGKtTLtdrLly 25 
                 + ig+ig  ++GK++++ +L  
  KHJ31671.1 329 VSIGFIGYPNTGKSSIINTLRR 350
                 789*************999875 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.15
                 EEEETTCSSEEEEEEEESSS CS
    GTP_EFTU  61 isleketkkylinliDtPGH 80 
                 +++   t  ++i liD+PG 
  KHJ31671.1 366 WQYI--TLMKRIYLIDCPGV 383
                 5555..667899*******6 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0     0.004         8      78     120 .]     233     277 ..     196     277 .. 0.86
   2 ?    4.7   0.0     0.016        33       3      24 ..     332     353 ..     330     368 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.004
                 CTSCEEEEEEEGHHH..HCHHHHHHHHHHHCSSS-EEEEEE-TTT CS
         Roc  78 reaalailvydsrss..enlkeWlkelkkvagkspvilvgnkiDl 120
                  +++++i v+d+r+   ++ ++  k +k++a+++ vi+v nk+Dl
  KHJ31671.1 233 DSSDVVIHVLDARDPigTRCQSVEKYIKEEAPHKHVIFVLNKCDL 277
                 567889999998864347888888999****************95 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.016
                 EEESSTTSSHHHHHHCHCT-CC CS
         Roc   3 vlvGdsgvGKtsllkrfvedkf 24 
                  ++G  ++GK+s+++ + ++k+
  KHJ31671.1 332 GFIGYPNTGKSSIINTLRRKKV 353
                 589************9988775 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       0.9   1.8e+03      45      76 ..     260     290 ..     252     299 .. 0.68
   2 ?   10.3   0.0   0.00034      0.68       7      46 ..     311     350 ..     305     377 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.9
      AAA_16  45 lralekdggiflrgkcdqlesaipysa.laqal 76 
                 ++++  +++if+  kcd  +++   +a ++++l
  KHJ31671.1 260 KEEAPHKHVIFVLNKCDLVPTS--IAAsWVRYL 290
                 4555566899*******99433..334466666 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00034
      AAA_16   7 eeleqLlsalervrsgrp.elvllsGesGvGKsslvrellr 46 
                   + qLl+ +++++s+r   ++ ++G++ +GKss++++l+r
  KHJ31671.1 311 SLI-QLLRQFSSLHSDRKqVSIGFIGYPNTGKSSIINTLRR 350
                 555.77777888999999999******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (497 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 3326.60
//
Query:       KHJ31672.1  [L=309]
Description: hypothetical protein EV44_g6183 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2227.77
//
Query:       KHJ31673.1  [L=147]
Description: hypothetical protein EV44_g0068 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1077.56
//
Query:       KHJ31674.1  [L=380]
Description: putative protein-tyrosine phosphatase 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.7e-55  186.7   0.0    6.1e-55  186.3   0.0    1.1  1  Y_phosphatase    Protein-tyrosine phosphatase
     0.0073   16.4   0.0      0.014   15.5   0.0    1.5  1  PTPlike_phytase  Inositol hexakisphosphate
  ------ inclusion threshold ------
      0.015   15.2   0.0       0.03   14.3   0.0    1.5  1  Y_phosphatase3   Tyrosine phosphatase family
      0.055   13.3   0.0       0.15   11.9   0.0    1.8  1  DSPc             Dual specificity phosphatase, catalytic doma


Domain annotation for each model (and alignments):
>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.3   0.0   1.4e-58   6.1e-55       3     233 ..      78     333 ..      76     335 .. 0.86

  Alignments for each domain:
  == domain 1  score: 186.3 bits;  conditional E-value: 1.4e-58
                    GGSSSTTS-B-CTTEEEBTTTTTTTT.EEEEEEEEECTEEEEEEEEE---G.GGHHHHHHHHHHTT--EEEEESBSEETTEESS---S-SSTSS.. CS
  Y_phosphatase   3 eknRykdilpydksrVklkssegpsd.YInAnyikgykkekkyIatQgPlk.stvedFWrmvwqekvkvivmLtsleekgrekcaqYwpeeeee.. 94 
                    ++ Ry +i p  ++ ++lk+ ++  d YInA+ i++ ++++ +IatQgP + +t+ +FW+m+wqe+ +vivmLt+++e g ekc  Y p ++ +  
     KHJ31674.1  78 QRDRYINIRPWAHNAIQLKNAQKFPDnYINASPISLGRNQEIFIATQGPGPgDTILHFWQMIWQERAEVIVMLTKFVEDGTEKCGVYMPLQKADvl 173
                    688***************776665556**********9***************************************************7777744 PP

                    ..EEEETT..EEEEEE.EEEEEESSEEEEEEEEEETTTTE..EEEEEEEEEESSS-SSSSGSCCHHHHHHHHHHHHHH..........STTSS-EE CS
  Y_phosphatase  95 ..sleygk..ikvtlkekekedekeyvlrelevkkkkees..eerevkqlqytnWpdhgvpesaksllklirkveksk..........eaksgpvv 174
                      + ++g    kv+++  + ++e+   +r+l++ k++e++  eer v++l +  Wpdh+vp ++++ + li+ ++ s+          + ++ p +
     KHJ31674.1 174 ilKPRTGPvwGKVECE--TLQKEDWGEIRQLRIMKNSESQlfEERLVYHLLFMRWPDHKVPREKNDRMALINLINLSRekmshnvdspKVNTPPRI 267
                    3344444444567777..34345556889999888888778899*****************888888877777777766779999*9999****** PP

                    EECSSSSHHHHHHHHHHHHHHHHHHHSE.......EEHHHHHHHHHTTSTTSS-SHHHHHHHHHHH CS
  Y_phosphatase 175 VhCsaGvgRtgtfvaldillqqleaeee.......vdvlqivkelrkqRpgmvqtleqyiflyevi 233
                    +hCsaGvgRtgtf+ald ll++le+++          +l++v++lr+qR+g+v++++qy+ +y+++
     KHJ31674.1 268 IHCSAGVGRTGTFIALDHLLHELEENKLdyigdedDPILNTVQRLREQRMGLVNNVQQYALIYQIL 333
                    *************************555566666788999***********************997 PP

>> PTPlike_phytase  Inositol hexakisphosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   3.1e-06     0.014     105     155 ..     224     287 ..     168     288 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 3.1e-06
                      EEE-TTS---HH.HHHHHHHHHHTS-T............T-EEEEE-SSSSHHHHHHHHHHHHH CS
  PTPlike_phytase 105 ipitdekapeee.dfdalvsilkeape............ktalvfnCqmGrgRTTtamviatLl 155
                      +  +d+k p+e+ d  al+++++   e            +++ +++C++G+gRT t++++  Ll
       KHJ31674.1 224 MRWPDHKVPREKnDRMALINLINLSREkmshnvdspkvnTPPRIIHCSAGVGRTGTFIALDHLL 287
                      334788888775245566666655533466999999999*****************99886665 PP

>> Y_phosphatase3  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   6.7e-06      0.03     121     149 ..     263     292 ..     220     327 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6.7e-06
  Y_phosphatase3 121 e.pvlfHCtaGKDRTGvlaalllsllGvde 149
                     + p ++HC+aG  RTG ++al + l +++e
      KHJ31674.1 263 TpPRIIHCSAGVGRTGTFIALDHLLHELEE 292
                     2589****************9777766655 PP

>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.3e-05      0.15      77      92 ..     267     282 ..     234     298 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.3e-05
                 EEEESSSSSHHHHHHH CS
        DSPc  77 lVHCqaGisRSatlii 92 
                 ++HC aG+ R++t+i+
  KHJ31674.1 267 IIHCSAGVGRTGTFIA 282
                 79***********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       507  (0.0282782); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2709.15
//
Query:       KHJ31675.1  [L=426]
Description: putative micro-fibrillar-associated protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-69  232.8  34.4    3.8e-69  232.8  34.4    2.4  2  MFAP1     Microfibril-associated/Pre-mRNA processing


Domain annotation for each model (and alignments):
>> MFAP1  Microfibril-associated/Pre-mRNA processing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6  12.4      0.46   8.2e+03      33      91 ..      64     122 ..      28     125 .. 0.45
   2 !  232.8  34.4   2.1e-73   3.8e-69       1     217 []     119     339 ..     118     339 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 0.46
                 XXXXXXXXXXXXXXXX.X.XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXS-SSSSHHH CS
       MFAP1  33 eeeeeeeeeekkeeee.r.kkeakklveeeirkeaeakeaedeeeeeaedvddtDeldpea 91 
                 ++  ee++ ++  ee  r  +++kklv ee +  +e++e+e+e++ee e+ +d++e   e+
  KHJ31675.1  64 KSGYEEHNLKATLEESiRlEEQQKKLVLEEKEFVTESSEEEEEDTEE-EETSDEEES-SEE 122
                 33333333333333332313444555655555555544444333333.444444442.232 PP

  == domain 2  score: 232.8 bits;  conditional E-value: 2.1e-73
                 XXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXX.XXXXS-SSSSHHHHHHH CS
       MFAP1   1 sseeeepkrkllkPvFvpkskRetiaekeaeeeeeeeeeeeekkeeeerkkeakklveeeirkeaeakeae....deeeeeaedvddtDeldpeaeyea 95 
                 sseee +k  ll+PvF++k++R++i e    + +e+++++++ ++e+erk e +++vee+i+k+  ak+a+    d +++e +++ddtD++dpeae +a
  KHJ31675.1 119 SSEEEVQKPILLRPVFIKKENRKKIDE----TVTESQKHDKNIEAENERKIEVDQIVEEQIQKDLVAKAAGkkfwD-DDDEVDEIDDTDDIDPEAELAA 212
                 5777777779***************99....55555566666677789*******************999955532.445559**************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHX.XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXX CS
       MFAP1  96 WklReLkRikrdreereerekekeelerrrnlteeereaedrellkkqr.ekeekgkmkfmqkYyhkGAFfqd.eeeeellkrdlsaatledkvdkelL 192
                 WklReLkRikr+ree+ee+eke+ee+err+nlt+eer++ed e+ +kq+ eke+++km++mqkYyhkGAF+q+ +e+++ll+r++++a+++d+vd+e+L
  KHJ31675.1 213 WKLRELKRIKREREEIEEKEKEREEIERRQNLTAEERKKEDDEYIAKQKeEKEGRSKMSYMQKYYHKGAFYQEeAEAQGLLQRNIMGAKIQDEVDREIL 311
                 ************************************************999*********************9899*********************** PP

                 XXXXXXXX...XXXXXXXX......... CS
       MFAP1 193 Pkvmqvrd...fGkkgrtKYthLkdeDT 217
                 Pk+ q rd   +Gkkg+tKY++Lk+eDT
  KHJ31675.1 312 PKYFQQRDltkIGKKGATKYRDLKSEDT 339
                 ***************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3083  (0.171956); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                       123  (0.00686039); expected 17.9 (0.001)
Passed Fwd filter:                        46  (0.00256568); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.12u 0.33s 00:00:01.45 Elapsed: 00:00:00.53
# Mc/sec: 2401.00
//
Query:       KHJ31676.1  [L=713]
Description: putative ubiquitin carboxyl-terminal hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.6e-37  127.2   2.1    1.4e-36  126.3   0.2    2.4  2  UCH            Ubiquitin carboxyl-terminal hydrolase
  ------ inclusion threshold ------
      0.062   13.9   1.6        0.2   12.2   1.6    1.8  1  YABBY          YABBY protein


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.3   0.2   1.6e-40   1.4e-36       2     257 .]     151     560 ..     150     560 .. 0.75
   2 ?   -2.7   0.2      0.35   3.2e+03     105     128 ..     648     676 ..     647     684 .. 0.60

  Alignments for each domain:
  == domain 1  score: 126.3 bits;  conditional E-value: 1.6e-40
                 EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TT.HHHHHHHHHHHHHH...SH-CCEE--HHHHHHHHHHSGGGTSSS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   2 GlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkg.elakalkdlfkell...kskskavsPkklkktlsklaksfsgyk 96 
                 Gl N  n+Cy ns+lQ L+s+++l+ yl ++  +k+ ++        n+ ++ + ++ +al++l+++l+   ++ ++  +P        +l k +++++
  KHJ31676.1 151 GLGNWDNSCYQNSILQGLASLKNLSAYLSRPFMEKSLTE--------NECTMPDiKMTEALRKLIESLNdplNNGTSLWTP--------ALLKYMNSWQ 233
                 999***************************533333333........345566668*************776545555555........222334789* PP

                 TCEHHHHHHHHHHHHHHHHCC.............................................................................. CS
                 xxxxxxxxxxxxxxxxxxxxx.............................................................................. RF
         UCH  97 qqDaqEflaflLdqlhedlnr.............................................................................. 117
                 qqDaqE+++ +Ld++++++                                                                                
  KHJ31676.1 234 QQDAQEYFSKVLDEIDREIGVavssaqkyeglilsssesgarklshkternplegliaqrvgclkcgfseglsltpfncltvplgrhrdsnilecldey 332
                 *******************99887788888877776666666666666666666666666666666666666666666666666666666666666666 PP

                 ...............................HCCCHHHHHHCCCTTSHHHHHH-EEEEE........................................ CS
                 ...............................xxxxxxxxxxxxxxxxxxxxxxxxxxxx........................................ RF
         UCH 118 ...............................evaeekwkkhlkrndslitdlfegqlks........................................ 145
                                                +                          +                                        
  KHJ31676.1 333 tkleiiegvecgkctllsgrrlllnlvekmkN--------------------------Npknkttrkkceerlenitkaienndceektlseqcqinsn 405
                 66666666666666666666666666655551..........................04444444444444444444444455556777788888888 PP

                 .........EEEEEEB-SEEEEEEESEEETEE...EEE--SEEB--SEEE-G........................GGBSS-BTTS-TCS-BEEEEEEE CS
                 .........xxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxx........................xxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 146 .........klklkrlPeiLiihlkRfsynss...ksKlntkvefpeeldls........................sylaeekkkkteekkkYeLiavv 208
                          +  + r P+ L++h++R  y++     +K+ ++v fp+ ldl                         +++a++ +++ +++++YeL avv
  KHJ31676.1 406 nrvtstktrQAVVARPPKSLVFHFNRSLYDEIsgdLRKNYCQVRFPKILDLGpwclgsvgnvedlskeewimkpdrPMVASSMSRSRQKGPIYELRAVV 504
                 888888899999*****************8888999****************8888888888888888888888887888888888888888******* PP

                 EEESCTTSEEEEEEEE......CTTTTEEEEEETTEEEEE-HHCCCTT..CEEEEEE CS
                 xxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxx RF
         UCH 209 vHsGslssGHYvayik......nekngkWykydDetvkevkeeeevls..sayiLfY 257
                  H+G +++GHYv+y+k      ++++++W++++De+v +v+ee +vl+   +++LfY
  KHJ31676.1 505 THYGRHENGHYVCYKKypitraRDHQERWWRLSDEEVIQVSEE-NVLNqgGVFMLFY 560
                 *************999888876666777*************98.78887999****9 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.35
                 HHHHHHHHHHHCCHCCCHHH.....HHHC CS
                 xxxxxxxxxxxxxxxxxxxx.....xxxx RF
         UCH 105 aflLdqlhedlnrevaeekw.....kkhl 128
                 +fl+++l+e +n++ ++e+      ++h+
  KHJ31676.1 648 NFLINNLQEHCNSNFEYEEKaeyesESHE 676
                 68999999999995554444322224444 PP

>> YABBY  YABBY protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.6   2.3e-05       0.2      30     112 ..     338     423 ..     331     438 .. 0.48

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.3e-05
       YABBY  30 ivtvrCGhCtnl....lsvnlrallla.paaaelqslkkqlelksellskelasssksseksk..ks.alasssseqeeeeeekvvnrppe 112
                 i  v CG+Ct l    l +nl + +++ p+ ++    +++++ +++l++ + a +++ +e+++  ++ +++s+++ ++++++++vv+rpp 
  KHJ31676.1 338 IEGVECGKCTLLsgrrLLLNLVEKMKNnPK-NK----TTRKKCEERLENITKAIENNDCEEKTlsEQcQINSNNRVTSTKTRQAVVARPPK 423
                 4579******99333334555555554343.22....222222222222222222222222221122133333333444455688999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (713 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1030  (0.0574488); expected 358.6 (0.02)
Passed bias filter:                      605  (0.0337442); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.31s 00:00:00.99 Elapsed: 00:00:00.46
# Mc/sec: 4701.48
//
Query:       KHJ31677.1  [L=194]
Description: hypothetical protein EV44_g5074 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-26   92.7   9.0    2.2e-26   92.7   9.0    1.7  2  Alb1           Alb1
  ------ inclusion threshold ------
      0.035   13.6   0.2      0.096   12.2   0.1    1.8  2  AA_permease_N  Amino acid permease N-terminal


Domain annotation for each model (and alignments):
>> Alb1  Alb1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.7   9.0   2.5e-30   2.2e-26       1     104 [.      13     118 ..      13     119 .. 0.96
   2 ?   -1.2   0.1      0.42   3.7e+03      43      43 ..     148     148 ..     121     182 .. 0.50

  Alignments for each domain:
  == domain 1  score: 92.7 bits;  conditional E-value: 2.5e-30
        Alb1   1 khSRAarraespslnldkslkslprpektdrertavlnealsagisk..kkkkkkklskklrlrqekgleraeavterlekKieksisrakyvqeRkag 97 
                 +hSRAarr +sp ++ldks+k++++p   +++r+++l+ ++sag+sk  k+++k  ls+k+++r ekgl+ a av++r+ekK++ks+s+a+ v+eR+ +
  KHJ31677.1  13 VHSRAARRLTSPGIDLDKSIKNIQPPTFIKKSRPSLLEIHQSAGVSKksKSRRKTVLSAKAKRRYEKGLDHAVAVMQRTEKKVKKSKSKARIVHERSLD 111
                 69*********************************************766777999******************************************* PP

        Alb1  98 wDeinkk 104
                 wD++n++
  KHJ31677.1 112 WDNLNRQ 118
                 *****86 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.42
        Alb1  43 a 43 
                 +
  KHJ31677.1 148 Q 148
                 1 PP

>> AA_permease_N  Amino acid permease N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   1.1e-05     0.096      35      48 ..      41      54 ..      33      74 .. 0.82
   2 ?   -2.8   0.0      0.51   4.6e+03      36      57 ..     123     146 ..     118     156 .. 0.53

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.1e-05
  AA_permease_N 35 aklsRPsLaeLHee 48
                    k+sRPsL e+H+ 
     KHJ31677.1 41 IKKSRPSLLEIHQS 54
                   59**********86 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.51
  AA_permease_N  36 klsRPsLaeLH..eelkknsalav 57 
                    k++R  L+ L   ++++ n ++ +
     KHJ31677.1 123 KIIRSNLSTLEtsSNIESNKSINL 146
                    666665554431144445544544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1484  (0.0827709); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1433.70
//
Query:       KHJ31678.1  [L=576]
Description: putative isocitrate lyase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-189  631.3   0.3   1.3e-189  631.1   0.3    1.0  1  ICL       Isocitrate lyase family


Domain annotation for each model (and alignments):
>> ICL  Isocitrate lyase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  631.1   0.3  7.2e-194  1.3e-189       2     526 .]      54     574 ..      53     574 .. 0.98

  Alignments for each domain:
  == domain 1  score: 631.1 bits;  conditional E-value: 7.2e-194
                 HHXHHHHHTSGGGGG---SS-HHHHHHH--SS----THHHHHHHHHHHHHHHHHHT--EEEEB--SHHHHHHHHHH-S-EEE-HHHHHHH--TT----S CS
         ICL   2 vaevkkwwsdsrwrktkrvysaedivskrGnlkieyasseqakklfklleeheaektasktfGaldpvqvtqmakyldtiyvsGwqssstastsnepsp 100
                 v+ev+kww ++r++  kr+y+aed+vskrG+   +y+ss++a+klf+l++e+ea ++  +t G++dp+q+tq a   + +y+sGw +sst +t+ne sp
  KHJ31678.1  54 VKEVEKWWASPRYHGIKRSYTAEDVVSKRGSQLHSYTSSVMARKLFNLVKEREAAGKPIHTMGVIDPIQMTQQAVNQEVLYISGWACSSTLTTTNEVSP 152
                 89************************************************************************************************* PP

                 S-S-S-TTHHHHHHHHHHHHHHHHHHHHHHHHHSS-HHHHTTS--------EEEE-TT-SSSHHHHHHHHHHHHHTT-SEEEE-SB-TT---------E CS
         ICL 101 dladypmdtvpnkvehlflaqlfhdrkqkeerlkvkkeereklanvdylrpiiadadtGhGGltavvkltklfierGaaGihiedqasgtkkcGhmaGk 199
                 dl dyp++tvpn+v+ + +aq +hdrkq + r k + eer++++++dylrpiiad+dtGhGGl+av+kl+klf e+Gaa +h edq  g kkcGh++Gk
  KHJ31678.1 153 DLGDYPYNTVPNQVQRMAKAQDMHDRKQWDTRRKWSAEERARIPYIDYLRPIIADGDTGHGGLSAVLKLSKLFAENGAAAVHFEDQLHGGKKCGHLSGK 251
                 *************************************************************************************************** PP

                 EE--HHHHHHHHHHHHHHHHHTT---EEEEE--GGGEEEES-TT-GGGGGGEEEE--TTS--HHHHHHHHHHS---SHHHHHHHHHHHHHS-EE-SHHH CS
         ICL 200 vlvpiqehinrlvairaqadilgsdllvvartdseaatlitstidtrdhafilGatnpdleeladllveaeaeGksGaelqaiedewlkkaglklfeea 298
                 vlvpi ehinrl+a+r q d++g++ l++artdse+ +li+s+id rdh+filG++++ +e+l++ l++ e++G+s +++++ e ewlkk++l + +ea
  KHJ31678.1 252 VLVPIGEHINRLLAARFQWDLMGTENLLIARTDSESGKLISSAIDVRDHEFILGVAEEGVEPLSEKLQAMEMRGASASDINSFEVEWLKKTNLITCDEA 350
                 *************************************************************************************************** PP

                 HHHHHHTSS-S-HHHHHHHHHHHHTT--HH...HHHHHHHHHHSS----BTTSS--TT--EEE--SHHHHHHHHHHHTTS-SEEE---SS--HHHHHHH CS
         ICL 299 vvdeieksklsnkkelikkftkkvkplselsnkearklakellgkdiffdwelprvreGyyrykGgtqcsvvravafapyadliwmesklpdyaqakef 397
                 ++++++     n+ +l ++++ +v ++++ls  + ++la++l  k + f+ ++pr+reG+y y+ g+ ++ +ra+ +apyadliw+e+  p ++ a ++
  KHJ31678.1 351 MIQQLK-----NNPNLAHEYEVEVFKNKNLSIMKRKQLAENLGKKRVIFNIDIPRTREGFYHYRSGIAAATKRAIDYAPYADLIWVETGDPSVQTAAKI 444
                 *98765.....5678899999999999************************************************************************ PP

                 HHHHHTT-TT-EEEEE--SSS-GGGTS-HHH.HHSHHHHHHHTTEEEEEETTHHHHHHHHHHHHHHHHHHHHTHHHHHHHTHHHHHHHT-GGGSHHHHH CS
         ICL 398 aeGvkakvpeqklaynlspsfnwkkamsade.qetyikrlaklGyvwqfitlaGlhtnalisdkfakdyakrGmkaygeevqeeeidnGvdvvkhqkws 495
                 +  +++ +p++ l ynlspsfnw +++ + e  +++i  +ak+Gyv q+++laGlh++a i+++++k +  +Gm ay++ +q++e +  +dv++hqkws
  KHJ31678.1 445 STDIHNSHPHKPLVYNLSPSFNWMSCGFTSEtLKSFIWDIAKFGYVIQLVSLAGLHSTATITNELSKRFKVEGMLAYVDLIQKREKELNCDVLTHQKWS 543
                 ***********************9998766659****************************************************************** PP

                 THHHHHHHHHHHH--XXXXXXXXXXXXXXXX CS
         ICL 496 GaeyidellklvtGGvsstaamGkGvtedqf 526
                 G++yid++l  ++ G s +  mG+  te+qf
  KHJ31678.1 544 GTNYIDGVLGSIQSGNSISKGMGEDNTEKQF 574
                 ******************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (576 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       471  (0.0262703); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4204.92
//
Query:       KHJ31679.1  [L=88]
Description: putative 40s ribosomal protein s21 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.3e-41  138.6   0.0    5.9e-41  138.5   0.0    1.0  1  Ribosomal_S21e  Ribosomal protein S21e


Domain annotation for each model (and alignments):
>> Ribosomal_S21e  Ribosomal protein S21e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.5   0.0   3.3e-45   5.9e-41       1      78 [.       1      78 [.       1      79 [. 0.99

  Alignments for each domain:
  == domain 1  score: 138.5 bits;  conditional E-value: 3.3e-45
  Ribosomal_S21e  1 mqndagelVdlYiPrkcsatnrlItakDhasvqinvaevdetGratgesttyalsgairrkGesddslnrlakkdgll 78
                    m+nd+gelVdl++Prkcsatnr+I+akDhasvqi++a+vde+Gr+tge ++ya+sg++r++Gesddslnrla++dgll
      KHJ31679.1  1 MENDKGELVDLFVPRKCSATNRIIKAKDHASVQISIAKVDENGRLTGECQVYAFSGFVRAMGESDDSLNRLAQRDGLL 78
                    9***************************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       322  (0.0179597); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 644.51
//
Query:       KHJ31680.1  [L=796]
Description: putative at hook domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-24   85.5   1.2    4.3e-24   84.2   1.2    1.7  1  Slx4      Slx4 endonuclease


Domain annotation for each model (and alignments):
>> Slx4  Slx4 endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.2   1.2   2.4e-28   4.3e-24       1      61 []     712     784 ..     712     784 .. 0.97

  Alignments for each domain:
  == domain 1  score: 84.2 bits;  conditional E-value: 2.4e-28
                 HHHHHHHHHT........-HHHHHHHHTT--EEHHHHHHHHHHH-GGGG......GS-HHHHHHHHHHHT--EE- CS
        Slx4   1 feaiteaiks........dpslhekILlYePIvLedltawLnteglglk......evdpaelrewcdskgIcctw 61 
                 f++it+a+k+        +p ++ekILlY+PIv+edlt wLnt+   l+      evd++ +++wc+sk+Icc+w
  KHJ31680.1 712 FSHITQAVKNiipskeakNPNWYEKILLYDPIVIEDLTIWLNTG--ALQktnwdgEVDTKIVKKWCESKSICCLW 784
                 689*****************************************..78889**********************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (796 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1643  (0.0916392); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.71u 0.30s 00:00:01.01 Elapsed: 00:00:00.48
# Mc/sec: 5024.50
//
Query:       KHJ31681.1  [L=593]
Description: putative c2h2 finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (593 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       826  (0.0460706); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 4034.63
//
Query:       KHJ31682.1  [L=348]
Description: hypothetical protein EV44_g0065 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2560.91
//
Query:       KHJ31683.1  [L=836]
Description: putative pre-mrna splicing factor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00049   20.5   0.0     0.0013   19.2   0.0    1.7  1  HhH-GPD   HhH-GPD superfamily base excision DNA repair protei


Domain annotation for each model (and alignments):
>> HhH-GPD  HhH-GPD superfamily base excision DNA repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0     7e-08    0.0013       6      75 ..     636     716 ..     631     783 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 7e-08
                 HTTS-HHHHHHHHHHHHHHHSHCSHHHHHHSHHHHHHHHHTTSTTHHHHHHHHHHHHHHHH.............S-SSS--TT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............xxxxxxxxx RF
     HhH-GPD   6 sqqtsderanriierlferfgfptpedladadeekLrelirelGfyrrKakyikelArilv.............gkpdvlivv 75 
                   +t+   a +i+  l ++   p+pe++++a+ ++++++i +lGf +++a+  k+ A i +             g+p+ ++  
  KHJ31683.1 636 LTRTHGIHALPIYHALINQ--YPSPESFLAANKQDIVSIINCLGFQNQRANTFKSYASIWLknpptknkryavhGYPNRGSGR 716
                 5567777788999999999..59**********************************99988888777777777444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (836 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.24s 00:00:00.88 Elapsed: 00:00:00.41
# Mc/sec: 6075.38
//
Query:       KHJ31684.1  [L=445]
Description: putative glycerol-3-phosphate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.9e-45  153.3   0.1    8.9e-45  152.5   0.1    1.4  1  NAD_Gly3P_dh_N  NAD-dependent glycerol-3-phosphate dehydrogen
      8e-42  142.9   0.1    1.6e-41  141.9   0.1    1.5  1  NAD_Gly3P_dh_C  NAD-dependent glycerol-3-phosphate dehydrogen
  ------ inclusion threshold ------
       0.12   13.2   0.1       0.24   12.3   0.1    1.3  1  HABP4_PAI-RBP1  Hyaluronan / mRNA binding family


Domain annotation for each model (and alignments):
>> NAD_Gly3P_dh_N  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.5   0.1   1.5e-48   8.9e-45       1     154 [.      38     219 ..      38     222 .. 0.98

  Alignments for each domain:
  == domain 1  score: 152.5 bits;  conditional E-value: 1.5e-48
                     -EEEE--SHHHHHHHHHHHTTT........--EEEE-S-H...................HHHHHHHHHSSBTTTBTT----TTEEEES-HHHHHT CS
  NAD_Gly3P_dh_N   1 kiavlGaGswGtalAkvlaeng........hevrlwvree...................elieeineehenvkyLpgiklpenlvattdlaealk 68 
                     k++v+G+G+wG+++Ak++aen+        ++v +wv+ee                   +l++ in+ henvkyLpgi+lp n+ a++ l +a+k
      KHJ31684.1  38 KVTVIGSGNWGSTIAKIVAENTiehpelfeEQVQMWVYEEeitlpqeskytsnneknpqKLTDIINTYHENVKYLPGITLPLNVIANSSLIDAAK 132
                     79********************************************************************************************* PP

                     T--EEEE---HHHHHHHHHHHCCC--TT-EEEE---SE..ET.TTEEHHHHHHHHH-S--EEEEESS--HHHHHTT--EEEEEEES-H CS
  NAD_Gly3P_dh_N  69 gadiivlvvPsqalrevlkklkgllkkkailvsliKGi..eegtlkllsevieeelkeekvavlsGpslAeEvakgkptavviaskdk 154
                     +++i+++++P+q++ ++ k+l+g++ + a+ +s+iKG+   e +  l+se i + l+++ ++ lsG+++A+E+a++++++++ia++ +
      KHJ31684.1 133 NSSILIFNLPHQFISKITKQLEGHILPYARGISCIKGVnvTEAKISLFSEWIGQGLGIY-CGALSGANIASEIAREMWCETTIAYDPP 219
                     **************************************9877899**************.************************9865 PP

>> NAD_Gly3P_dh_C  NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.9   0.1   2.7e-45   1.6e-41       1     140 [.     289     435 ..     289     437 .. 0.95

  Alignments for each domain:
  == domain 1  score: 141.9 bits;  conditional E-value: 2.7e-45
                     -HHHHHHHHHHHHHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHHHHHHTSS...GGGGG.STTTHHHHHHHHHSCT.HHHHHHHHHHC.T--H CS
  NAD_Gly3P_dh_C   1 DviGvelagalKNviAiaaGivdglglgdntkaalitrglaEmarlakalgak...petfl.glaglgDlivtctsgksRNrrfGeelgk.gesl 90 
                     Dv+Gv+l+galKN++A+aaG+vdg g+gdn+kaa+++ gl Em r++k++ ++   +etf+ +++g++Dli++c++g  RN+r+++  ++ + s+
      KHJ31684.1 289 DVAGVSLGGALKNIVALAAGFVDGKGWGDNAKAAVMRVGLLEMVRFGKEFFGQtvrTETFTeESCGVADLITSCSGG--RNYRCAKLSVEqNLSI 381
                     9************************************************977678899*******************..*********9977799 PP

                     HHHHH.HHC.C--HHHHHHHHHHHHHHHTT...G.HHHHHHHHHHHS---HHHH CS
  NAD_Gly3P_dh_C  91 eeiek.eln.qvleGvetakevyellkkkgv..emplleavykilyegkspeel 140
                      e+e+ eln q+l+G+ takev+ +lk++g    +pl++av +il+++ +++++
      KHJ31684.1 382 TEVEQkELNgQKLQGTLTAKEVNVFLKARGRedAYPLFKAVLDILENRNTVDDI 435
                     9999889999******************9888899************9999876 PP

>> HABP4_PAI-RBP1  Hyaluronan / mRNA binding family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   3.9e-05      0.24      16      77 ..      34      95 ..      30     111 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.9e-05
  HABP4_PAI-RBP1 16 kneeKregagrgnWGtvkdeieeqeeeeae....kaaekeaeeedaeeeaaeaeeaaaaeeeekee 77
                    k++ K    g+gnWG++  +i ++++ e+     ++++ +  ee+     +  +e++ + ++ek++
      KHJ31684.1 34 KKKHKVTVIGSGNWGSTIAKIVAENTIEHPelfeEQVQMWVYEEEI----TLPQESKYTSNNEKNP 95
                    567788889***********98888876664554333333333333....3333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       514  (0.0286686); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3246.97
//
Query:       KHJ31685.1  [L=414]
Description: putative duf618 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-18   66.1   0.0      1e-17   64.7   0.0    1.9  1  CTD_bind  RNA polymerase II-binding domain.
     0.0076   16.4   1.7      0.013   15.6   0.4    2.1  2  CREPT     Cell-cycle alteration and expression-elevated prote
  ------ inclusion threshold ------
      0.082   13.7   0.6        1.4    9.7   0.0    2.5  2  Pal1      Pal1 cell morphology protein


Domain annotation for each model (and alignments):
>> CTD_bind  RNA polymerase II-binding domain.
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.7   0.0   1.7e-21     1e-17       1      63 []      55     117 ..      55     117 .. 0.98

  Alignments for each domain:
  == domain 1  score: 64.7 bits;  conditional E-value: 1.7e-21
    CTD_bind   1 kLnllYLaNdvlqnskrkqkdefapaFapvlpeafadaykkapekikkklkrllniWeernvf 63 
                 +Lnl+YLaN+v+q+s+ ++k++f  aF+pv+ ea a+ayk+a  +++ kl+r++++W++r++f
  KHJ31685.1  55 RLNLIYLANEVVQQSRARRKEDFLIAFSPVIAEATATAYKGATGEVQTKLRRVVEVWRQRQIF 117
                 8**************99999********************99999*****************9 PP

>> CREPT  Cell-cycle alteration and expression-elevated protein in tumour
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.4   2.3e-06     0.013      59     120 ..     213     274 ..     197     276 .. 0.89
   2 ?   -2.5   0.0      0.85   5.1e+03     102     125 ..     366     389 ..     334     393 .. 0.52

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2.3e-06
       CREPT  59 llaeYnkrLeaeleeRkklakmledfleaqkellakaeekleelkeklekvksvrkelkshi 120
                  la+  +  ++ ++ Rk l + le++l a +++l+++e++++e+ ++  ++++++ke+++ i
  KHJ31685.1 213 SLANAEGAVAESIKARKVLINGLEKILDANRTALQDEESQVTEISKRKLEIDNKKKEVEDAI 274
                 566667788999**********************************************9876 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.85
       CREPT 102 lkeklekvksvrkelkshiqsLPd 125
                  ++k+++v s++k   +h +  Pd
  KHJ31685.1 366 PHSKINTVGSAKKRKLTHGEDFPD 389
                 244555555555555555555555 PP

>> Pal1  Pal1 cell morphology protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00023       1.4      33     135 ..     197     296 ..     191     298 .. 0.77
   2 ?    1.5   0.2     0.076   4.5e+02      37      63 ..     326     352 ..     316     397 .. 0.50

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00023
        Pal1  33 skaaPvlAfpkdgannslgg.agklnkksaldevfGredeeddkdlaklsakakkkessetkaakksskevtafdsktkaelvhGeetaGLGssTFldG 130
                 + +aPv+A   +g  +sl+  +g ++++++  +v+ +   e+  d    +++a ++e+s+ ++++k++ e+ +   + +  ++ G  t+ + s+   dG
  KHJ31685.1 197 ALSAPVHAARLNGLLKSLANaEGAVAESIKARKVLING-LEKILD---ANRTALQDEESQVTEISKRKLEIDNKKKEVEDAIMRGFVTNSISSTPVEDG 291
                 5689*********9999998566777778888887654.333333...334444555556678999999999999999999****************** PP

        Pal1 131 apasr 135
                 +pa +
  KHJ31685.1 292 TPAVH 296
                 **976 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.076
        Pal1  37 PvlAfpkdgannslggagklnkksald 63 
                 P+ Af ++    s++  +k+n++s+l+
  KHJ31685.1 326 PISAFDVNEDLHSIENISKKNEQSQLK 352
                 555555555444444444444433332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1030  (0.0574488); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 3175.60
//
Query:       KHJ31686.1  [L=793]
Description: putative pentatricopeptide repeat domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
        0.3   11.6   0.8       0.71   10.4   0.3    1.8  2  Enterotoxin_ST  Heat-stable enterotoxin ST


Domain annotation for each model (and alignments):
>> Enterotoxin_ST  Heat-stable enterotoxin ST
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.3   3.9e-05      0.71       6      34 ..      13      40 ..       9      46 .. 0.87
   2 ?   -3.4   0.0      0.82   1.5e+04       8      20 ..     304     316 ..     303     329 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 3.9e-05
  Enterotoxin_ST  6 gqladsssekIaaEvnkkkCdtqkknsee 34
                     q+  s+s+kI +E  ++kCd +k+++ e
      KHJ31686.1 13 VQVLTSLSKKINTEL-EEKCDEKKPTAAE 40
                    58999**********.99*******9865 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.82
  Enterotoxin_ST   8 ladsssekIaaEv 20 
                     + dss++++ +E+
      KHJ31686.1 304 VYDSSKSQMVLES 316
                     5799999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (793 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       639  (0.0356406); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 5444.36
//
Query:       KHJ31687.1  [L=149]
Description: putative calmodulin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-41  136.0  12.6    7.4e-10   37.7   0.7    4.1  4  EF-hand_1        EF hand
    1.7e-35  121.3   5.9    1.9e-18   66.7   2.3    2.1  2  EF-hand_7        EF-hand domain pair
      9e-34  115.1  11.9      2e-14   53.1   0.1    4.0  4  EF-hand_8        EF-hand domain pair
    6.4e-30  100.5   9.5    1.9e-09   36.7   0.2    4.4  4  EF-hand_6        EF-hand domain
    2.5e-25   86.8  10.5    2.6e-06   26.7   0.3    4.3  4  EF-hand_5        EF hand
    2.3e-16   59.9   0.4    2.3e-09   37.4   0.0    2.1  2  EF-hand_9        EF-hand domain
    5.4e-09   35.9   2.0     0.0012   18.8   0.3    2.3  2  EF-hand_4        Cytoskeletal-regulatory complex EF hand
    1.1e-08   35.4   0.1     0.0032   17.7   0.1    2.1  2  SPARC_Ca_bdg     Secreted protein acidic and rich in cysteine
    1.8e-06   27.9   0.0     0.0077   16.2   0.0    3.0  3  UPF0154          Uncharacterised protein family (UPF0154)
    1.2e-05   25.3   2.2    3.4e-05   23.9   0.4    2.3  2  EFhand_Ca_insen  Ca2+ insensitive EF hand
    0.00011   22.2   0.3       0.35   10.8   0.0    2.2  2  TerB             Tellurite resistance protein TerB
    0.00014   22.6   0.2     0.0035   18.2   0.1    2.0  2  EF-hand_11       EF-hand domain
    0.00048   20.5   0.7       0.55   10.6   0.1    2.7  3  RNA_pol_Rpb4     RNA polymerase Rpb4
    0.00078   19.4   2.0       0.44   10.5   0.0    3.5  4  Caleosin         Caleosin related protein
     0.0021   18.8   0.3        3.9    8.3   0.0    2.9  3  DUF3349          Protein of unknown function (DUF3349)
     0.0052   16.9   7.1       0.27   11.5   0.9    2.9  2  Dockerin_1       Dockerin type I domain
     0.0069   16.8   0.0        1.6    9.2   0.0    2.1  2  DUF4497          Protein of unknown function (DUF4497)
     0.0096   14.5   0.0     0.0099   14.5   0.0    1.0  1  DUF5580          Family of unknown function (DUF5580)
  ------ inclusion threshold ------
      0.023   15.0   0.3        6.5    7.2   0.0    2.4  2  EF-hand_14       EF-hand domain
      0.023   14.9   0.0       0.21   11.9   0.0    2.5  2  Poly_export      Polysaccharide biosynthesis/export protein
      0.031   14.2   0.9        1.1    9.1   0.2    2.3  2  SurA_N_2         SurA N-terminal domain
      0.051   14.0   0.0        7.4    7.1   0.0    3.0  3  RuvA_C           RuvA, C-terminal domain
      0.066   13.3   0.6       0.33   11.0   0.2    1.9  2  YqeY             Yqey-like protein
      0.077   12.2   0.2        1.1    8.3   0.1    2.1  2  dCache_2         Cache domain
       0.12   12.5   0.2        2.6    8.2   0.0    2.3  2  MotA_activ       Transcription factor MotA, activation domain
        0.2   11.8   1.2       0.89    9.7   0.2    2.0  2  RloB             RloB-like protein


Domain annotation for each model (and alignments):
>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.1     2e-12   1.3e-09       1      29 []      12      40 ..      12      40 .. 0.96
   2 !   33.9   0.2   1.8e-11   1.2e-08       1      28 [.      48      75 ..      48      76 .. 0.95
   3 !   34.5   0.1   1.1e-11   7.8e-09       1      28 [.      85     112 ..      85     113 .. 0.95
   4 !   37.7   0.7   1.1e-12   7.4e-10       1      27 [.     121     147 ..     121     149 .] 0.95

  Alignments for each domain:
  == domain 1  score: 36.9 bits;  conditional E-value: 2e-12
                HHHHHHHHHTTTSSSEEEHHHHHHHHHHH CS
   EF-hand_1  1 elkeiFrefDkDgdGkIdfeEfkellkkl 29
                e+ke+F++fDkDgdG+I+ +E+ +++++l
  KHJ31687.1 12 EFKEAFSLFDKDGDGQITTKELGTVMRSL 40
                79************************986 PP

  == domain 2  score: 33.9 bits;  conditional E-value: 1.8e-11
                HHHHHHHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1  1 elkeiFrefDkDgdGkIdfeEfkellkk 28
                el+++++e+D D++G+Idf Ef++++++
  KHJ31687.1 48 ELQDMINEVDADNNGTIDFPEFLTMMAR 75
                799***********************86 PP

  == domain 3  score: 34.5 bits;  conditional E-value: 1.1e-11
                 HHHHHHHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1   1 elkeiFrefDkDgdGkIdfeEfkellkk 28 
                 e++e+F++fD+D++G+I+  E++ ++++
  KHJ31687.1  85 EIREAFKVFDRDNNGFISAAELRYVMTS 112
                 79************************97 PP

  == domain 4  score: 37.7 bits;  conditional E-value: 1.1e-12
                 HHHHHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1   1 elkeiFrefDkDgdGkIdfeEfkellk 27 
                 e++e++re+D+DgdG+Id++Ef++l++
  KHJ31687.1 121 EVDEMIREADQDGDGRIDYNEFVQLMM 147
                 79************************7 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.4   0.1   4.5e-18   3.1e-15       3      70 ..      12      73 ..      10      74 .. 0.95
   2 !   66.7   2.3   2.7e-21   1.9e-18       1      70 [.      83     146 ..      83     147 .. 0.97

  Alignments for each domain:
  == domain 1  score: 56.4 bits;  conditional E-value: 4.5e-18
   EF-hand_7  3 klkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkly 70
                + keaF ++D+dgdg ++  el  ++r      + g ++s+ el+++++e+D d++G+i+f EFl+++
  KHJ31687.1 12 EFKEAFSLFDKDGDGQITTKELGTVMR------SLGQNPSESELQDMINEVDADNNGTIDFPEFLTMM 73
                6799*******************9999......999999***************************99 PP

  == domain 2  score: 66.7 bits;  conditional E-value: 2.7e-21
   EF-hand_7   1 eeklkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkly 70 
                 ee+++eaFk +D+d++g+++ +el+ +++      + g+kl+d+e++++++e D+d+dG+i+++EF++l+
  KHJ31687.1  83 EEEIREAFKVFDRDNNGFISAAELRYVMT------SIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146
                 689**********************9998......9********************************99 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.2   0.00018      0.12      26      47 ..      11      32 ..       4      33 .. 0.89
   2 !   53.1   0.1   2.9e-17     2e-14       2      54 ..      25      75 ..      24      76 .. 0.97
   3 !   19.2   0.2   1.2e-06   0.00081      24      47 ..      82     105 ..      75     106 .. 0.89
   4 !   52.9   0.7   3.5e-17   2.4e-14       2      52 ..      98     146 ..      98     149 .] 0.95

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00018
   EF-hand_8 26 eevdilfrefDtdgdGkisfeE 47
                +e+ + f++fD dgdG i+ +E
  KHJ31687.1 11 SEFKEAFSLFDKDGDGQITTKE 32
                678889************9887 PP

  == domain 2  score: 53.1 bits;  conditional E-value: 2.9e-17
   EF-hand_8  2 kgkItreelrrilrilglkkglseeevdilfrefDtdgdGkisfeEFcvller 54
                +g+It+ el + +r+lg++   se+e++++++e+D d++G+i+f EF+ +++r
  KHJ31687.1 25 DGQITTKELGTVMRSLGQN--PSESELQDMINEVDADNNGTIDFPEFLTMMAR 75
                8******************..******************************97 PP

  == domain 3  score: 19.2 bits;  conditional E-value: 1.2e-06
   EF-hand_8  24 seeevdilfrefDtdgdGkisfeE 47 
                 seee+++ f+ fD+d++G is  E
  KHJ31687.1  82 SEEEIREAFKVFDRDNNGFISAAE 105
                 89******************9776 PP

  == domain 4  score: 52.9 bits;  conditional E-value: 3.5e-17
   EF-hand_8   2 kgkItreelrrilrilglkkglseeevdilfrefDtdgdGkisfeEFcvll 52 
                 +g I+ +elr  ++++g k  l+++evd+++re+D+dgdG+i+++EF++l+
  KHJ31687.1  98 NGFISAAELRYVMTSIGEK--LTDDEVDEMIREADQDGDGRIDYNEFVQLM 146
                 599**********888*99..****************************99 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7   0.2   2.7e-12   1.9e-09       1      31 []      12      41 ..      12      41 .. 0.96
   2 !   15.2   0.1   2.1e-05     0.014       2      27 ..      49      74 ..      46      80 .. 0.87
   3 !   33.3   0.0   3.4e-11   2.4e-08       1      31 []      85     114 ..      85     114 .. 0.93
   4 !   18.9   0.4   1.4e-06   0.00096       7      27 ..     127     147 ..     116     148 .. 0.87

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 2.7e-12
   EF-hand_6  1 elreaFklfDkdgdGkidaeElrkalrkalg 31
                e++eaF lfDkdgdG+i+++El  ++r +lg
  KHJ31687.1 12 EFKEAFSLFDKDGDGQITTKELGTVMR-SLG 41
                79*************************.887 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 2.1e-05
   EF-hand_6  2 lreaFklfDkdgdGkidaeElrkalr 27
                l++  ++ D d++G+id+ E+  ++ 
  KHJ31687.1 49 LQDMINEVDADNNGTIDFPEFLTMMA 74
                66777889**************9986 PP

  == domain 3  score: 33.3 bits;  conditional E-value: 3.4e-11
   EF-hand_6   1 elreaFklfDkdgdGkidaeElrkalrkalg 31 
                 e+reaFk fD+d++G+i+a+Elr +++ + g
  KHJ31687.1  85 EIREAFKVFDRDNNGFISAAELRYVMT-SIG 114
                 79************************9.665 PP

  == domain 4  score: 18.9 bits;  conditional E-value: 1.4e-06
   EF-hand_6   7 klfDkdgdGkidaeElrkalr 27 
                 ++ D+dgdG id++E+++++ 
  KHJ31687.1 127 READQDGDGRIDYNEFVQLMM 147
                 678***************985 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.3   3.8e-09   2.6e-06       2      25 .]      14      37 ..      13      37 .. 0.92
   2 !   20.2   0.1   4.1e-07   0.00028       1      25 []      49      73 ..      49      73 .. 0.94
   3 !   22.8   0.0   6.3e-08   4.4e-05       1      22 [.      86     107 ..      86     110 .. 0.91
   4 !   21.9   0.4   1.2e-07   8.2e-05       3      25 .]     124     146 ..     122     147 .. 0.87

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 3.8e-09
                HHHHHHH-SS-SSCE-HHHHHHHH CS
   EF-hand_5  2 kdtFqaiDlNgDGkIskeELktlv 25
                k++F+ +D++gDG+I+  EL t++
  KHJ31687.1 14 KEAFSLFDKDGDGQITTKELGTVM 37
                778******************987 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 4.1e-07
                HHHHHHHH-SS-SSCE-HHHHHHHH CS
   EF-hand_5  1 lkdtFqaiDlNgDGkIskeELktlv 25
                l+d+ +++D+++ G+I++ E+ t++
  KHJ31687.1 49 LQDMINEVDADNNGTIDFPEFLTMM 73
                7899*****************9986 PP

  == domain 3  score: 22.8 bits;  conditional E-value: 6.3e-08
                 HHHHHHHH-SS-SSCE-HHHHH CS
   EF-hand_5   1 lkdtFqaiDlNgDGkIskeELk 22 
                 ++++F+ +D ++ G+Is+ EL+
  KHJ31687.1  86 IREAFKVFDRDNNGFISAAELR 107
                 5778*****************7 PP

  == domain 4  score: 21.9 bits;  conditional E-value: 1.2e-07
                 HHHHHH-SS-SSCE-HHHHHHHH CS
   EF-hand_5   3 dtFqaiDlNgDGkIskeELktlv 25 
                 ++ +++D +gDG+I+  E+ +l+
  KHJ31687.1 124 EMIREADQDGDGRIDYNEFVQLM 146
                 57899**************9875 PP

>> EF-hand_9  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.0   3.4e-12   2.3e-09       3      64 ..      16      75 ..      14      77 .. 0.96
   2 !   21.0   0.1   4.6e-07   0.00031       3      64 ..      89     148 ..      87     149 .] 0.94

  Alignments for each domain:
  == domain 1  score: 37.4 bits;  conditional E-value: 3.4e-12
   EF-hand_9  3 vFevcDtqktGrVpvsrlidyLravtaqdpeeseLeelakelDPdgedasvdldtflrvmre 64
                 F+++D +  G+++ ++l +++r  ++ +p+eseL++  +e+D d++ +++d+  fl++m +
  KHJ31687.1 16 AFSLFDKDGDGQITTKELGTVMRSLGQ-NPSESELQDMINEVDADNN-GTIDFPEFLTMMAR 75
                6**************************.*******************.************76 PP

  == domain 2  score: 21.0 bits;  conditional E-value: 4.6e-07
   EF-hand_9   3 vFevcDtqktGrVpvsrlidyLravtaqdpeeseLeelakelDPdgedasvdldtflrvmre 64 
                  F+v+D++  G +  ++l  ++   ++ + ++ e++e  +e+D dg  + +d + f + m++
  KHJ31687.1  89 AFKVFDRDNNGFISAAELRYVMTSIGE-KLTDDEVDEMIREADQDGD-GRIDYNEFVQLMMQ 148
                 5*****************999999999.89999************99.************97 PP

>> EF-hand_4  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.1   7.6e-06    0.0052       5      69 ..       6      73 ..       2      83 .. 0.81
   2 !   18.8   0.3   1.7e-06    0.0012       7      69 ..      84     146 ..      76     148 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 7.6e-06
   EF-hand_4  5 eeleikkyweifsgl.kpednkltgdkvapvlkn..skleedklekiwdladidedgkldfeefciam 69
                 e ++ ++ e fs   k+ d ++t +++ +v+++   + +e++l+ + +  d d++g++df ef  +m
  KHJ31687.1  6 TEEQVSEFKEAFSLFdKDGDGQITTKELGTVMRSlgQNPSESELQDMINEVDADNNGTIDFPEFLTMM 73
                5666777777787662567999**********98324567899*********************9888 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 1.7e-06
   EF-hand_4   7 leikkyweifsglkpednkltgdkvapvlkn..skleedklekiwdladidedgkldfeefciam 69 
                  ei++ +++f   ++++  ++  ++  v+ +   kl++d+++++   ad d dg++d++ef+  m
  KHJ31687.1  84 EEIREAFKVFD--RDNNGFISAAELRYVMTSigEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146
                 56666666665..3556788888888888763379**************************9776 PP

>> SPARC_Ca_bdg  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.6e-05     0.011      57     111 ..      14      70 ..       2      72 .. 0.86
   2 !   17.7   0.1   4.7e-06    0.0032      51     111 ..      81     143 ..      71     145 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.6e-05
  SPARC_Ca_bdg  57 awkFsklDtnsdkvlsksELaplrapl..vklehCikpflescDadkdkkislkEwc 111
                   +  Fs +D++ d+ ++++EL  +  +l   + e+  + ++++ Dad++++i+  E+ 
    KHJ31687.1  14 KEAFSLFDKDGDGQITTKELGTVMRSLgqNPSESELQDMINEVDADNNGTIDFPEFL 70 
                   557999*****************999944567999*******************996 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 4.7e-06
  SPARC_Ca_bdg  51 eckepvawkFsklDtnsdkvlsksELaplrapl..vklehCikpflescDadkdkkislkEwc 111
                     +e+++  F+ +D ++++++s +EL+ + +++    ++  ++++++++D+d d++i+ +E++
    KHJ31687.1  81 DSEEEIREAFKVFDRDNNGFISAAELRYVMTSIgeKLTDDEVDEMIREADQDGDGRIDYNEFV 143
                   456788889*******************99988333468889*******************97 PP

>> UPF0154  Uncharacterised protein family (UPF0154)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.1e-05    0.0077      29      58 ..      27      56 ..      23      58 .. 0.91
   2 ?   -0.2   0.0       1.5   1.1e+03      36      54 ..      71      89 ..      67      95 .. 0.72
   3 !    7.9   0.0    0.0045       3.1      26      57 ..      97     128 ..      89     131 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.1e-05
     UPF0154 29 pinekmirammkqmGrkPSekqikqvmrsm 58
                +i+ k + + m++ G++PSe+ ++ +++++
  KHJ31687.1 27 QITTKELGTVMRSLGQNPSESELQDMINEV 56
                688999999*****************9987 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.5
     UPF0154 36 rammkqmGrkPSekqikqv 54
                 +m+++m  + Se  i++ 
  KHJ31687.1 71 TMMARKMKDTDSEEEIREA 89
                5677888777788777765 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.0045
     UPF0154  26 enPpinekmirammkqmGrkPSekqikqvmrs 57 
                 +n  i++  +r  m + G k++   + +++r+
  KHJ31687.1  97 NNGFISAAELRYVMTSIGEKLTDDEVDEMIRE 128
                 5778999**********************986 PP

>> EFhand_Ca_insen  Ca2+ insensitive EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.73     5e+02       9      63 ..      14      69 ..       3      74 .. 0.49
   2 !   23.9   0.4   4.9e-08   3.4e-05       1      69 []      79     148 ..      79     148 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.73
                     HCHHHHH.CTTSSSEEHHHH...HHH-TTCHHHHHHCCSEEE-STT..S-TTEEECCCH CS
  EFhand_Ca_insen  9 eeaFral.aggKpYvTeedL...rrellpeqaeylierMpeysgpegdavekayDYvsF 63
                      eaF    ++g   +T ++L    r+l ++  e  ++ M +  +++   +++  D+ +F
       KHJ31687.1 14 KEAFSLFdKDGDGQITTKELgtvMRSLGQNPSESELQDMINEVDAD---NNGTIDFPEF 69
                     3567666666666677776622223444444444444444444444...4444555555 PP

  == domain 2  score: 23.9 bits;  conditional E-value: 4.9e-08
                      G-STHHHHHCHHHHH.CTTSSSEEHHHHHHH-TT..CHH.HHHHCCSEEE-STT..S-TTEEECCCHTTTTTT CS
  EFhand_Ca_insen   1 dvdsaeqveeaFral.aggKpYvTeedLrrellp..eqa.eylierMpeysgpegdavekayDYvsFlealfa 69 
                      d+ds e+++eaF+    ++  ++ + +Lr+ ++   e+  +  +++M +  +++     +  DY++F++ +++
       KHJ31687.1  79 DTDSEEEIREAFKVFdRDNNGFISAAELRYVMTSigEKLtDDEVDEMIREADQD---GDGRIDYNEFVQLMMQ 148
                      89*************888889********9887533555588888888888776...56789*******9986 PP

>> TerB  Tellurite resistance protein TerB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00051      0.35      41     108 ..      25      90 ..      23      98 .. 0.87
   2 !    9.8   0.1    0.0011      0.74      44      93 ..     101     148 ..      90     149 .] 0.90

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00051
        TerB  41 DgqvsesErqafrellksrfglspeeakallelfeeaeeeavdleqftralkrklspeqrraliealw 108
                 Dgq++ +E   +++ l ++ +  + e+++ + + ++  + ++d+ +f   ++rk+++ + ++ i+  +
  KHJ31687.1  25 DGQITTKELGTVMRSLGQNPS--ESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAF 90 
                 9***************66665..99*****************************99777666555555 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.0011
        TerB  44 vsesErqafrellksrfglspeeakallelfeeaeeeavdleqftralkr 93 
                 +s++E +++++ +    +l+++e+++ ++++++  +  +d+ +f++ + +
  KHJ31687.1 101 ISAAELRYVMTSI--GEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMMQ 148
                 7899999999999..78888************************998876 PP

>> EF-hand_11  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0      0.15   1.1e+02      29      84 ..      20      75 ..       8      83 .. 0.74
   2 !   18.2   0.1   5.1e-06    0.0035      13      80 ..      78     144 ..      71     149 .] 0.86

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.15
                H-TT-SSEE-HHHHHHHHHHHT----HHHHHHHHHTS-B-TTS-EEHHHHHHHHCS CS
  EF-hand_11 29 fdtlksntvsreefraictrrvqiltdeqfdrlwselpvnakgrlkyqdflsklsi 84
                fd      ++ +e+ ++     q  ++ +++ + +e+  + +g + +++fl+ ++ 
  KHJ31687.1 20 FDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMAR 75
                55555556666666666666666677778888999***************998765 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 5.1e-06
                 HHHHHSHHHHHHHHHHH-TT-SSEE-HHHHHHHHHHHT----HHHHHHHHHTS-B-TTS-EEHHHHHH CS
  EF-hand_11  13 kavashyhaivqefenfdtlksntvsreefraictrrvqiltdeqfdrlwselpvnakgrlkyqdfls 80 
                 k   s    i + f+ fd  +   +s  e+r + t   + ltd++ d +  e   +  gr+ y++f+ 
  KHJ31687.1  78 KDTDSE-EEIREAFKVFDRDNNGFISAAELRYVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQ 144
                 544443.568899*****************************************************86 PP

>> RNA_pol_Rpb4  RNA polymerase Rpb4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0074       5.1      92     120 ..      29      57 ..      27      58 .. 0.93
   2 ?   -1.8   0.0       5.5   3.8e+03      50      70 ..      71      91 ..      63      99 .. 0.59
   3 !   10.6   0.1    0.0008      0.55      91     118 ..     101     128 ..      96     131 .. 0.91

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0074
                   SHHHHHHHSTTGTTTSTSHHHHHHHHHHH CS
  RNA_pol_Rpb4  92 savelktlieeleerfedeqleeiLdelk 120
                   ++ el t++ +l +  ++++l+++++e+ 
    KHJ31687.1  29 TTKELGTVMRSLGQNPSESELQDMINEVD 57 
                   6789**********************985 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 5.5
                  HHHHCTHHTTSSHHHHHHHHH CS
  RNA_pol_Rpb4 50 eyltnkfsrlkneekfnelve 70
                  +++ +k + +++ee+++e ++
    KHJ31687.1 71 TMMARKMKDTDSEEEIREAFK 91
                  444444555555666665554 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.0008
                   SSHHHHHHHSTTGTTTSTSHHHHHHHHH CS
  RNA_pol_Rpb4  91 esavelktlieeleerfedeqleeiLde 118
                   +sa+el+ ++ ++ e+++d++++e++ e
    KHJ31687.1 101 ISAAELRYVMTSIGEKLTDDEVDEMIRE 128
                   689**********************986 PP

>> Caleosin  Caleosin related protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   0.00064      0.44       7      40 ..      14      47 ..       8      53 .. 0.80
   2 ?    3.1   0.1      0.12        83      93     127 ..      47      81 ..      45      91 .. 0.83
   3 ?    4.3   0.0     0.048        33      10      33 ..      90     113 ..      81     118 .. 0.74
   4 ?   -0.4   0.0       1.4   9.8e+02      95     118 ..     122     145 ..     115     149 .] 0.54

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00064
    Caleosin  7 qqHvaFfDrdkdGiiypldtyrgfralgfnvlls 40
                ++ ++ fD+d dG i+  +  + +r+lg n   s
  KHJ31687.1 14 KEAFSLFDKDGDGQITTKELGTVMRSLGQNPSES 47
                5556789************999999999987666 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.12
    Caleosin  93 qkfeeifskyakekkdaltlkevlellkgqrealD 127
                 ++++++ ++ ++++++++ + e+l+++ ++++ +D
  KHJ31687.1  47 SELQDMINEVDADNNGTIDFPEFLTMMARKMKDTD 81 
                 57788999999999999999999999999988777 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.048
    Caleosin  10 vaFfDrdkdGiiypldtyrgfral 33 
                 ++ fDrd++G+i   +    + ++
  KHJ31687.1  90 FKVFDRDNNGFISAAELRYVMTSI 113
                 6679******99998876666555 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 1.4
    Caleosin  95 feeifskyakekkdaltlkevlel 118
                  +e+ ++ +++ ++ + ++e+++l
  KHJ31687.1 122 VDEMIREADQDGDGRIDYNEFVQL 145
                 455555555555555555555555 PP

>> DUF3349  Protein of unknown function (DUF3349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0056       3.9      31      85 ..       2      55 ..       1      63 [. 0.83
   2 ?    2.3   0.0      0.44     3e+02      23      68 ..      66     112 ..      59     116 .. 0.68
   3 ?    6.0   0.1     0.029        20      28      61 ..     111     141 ..     102     148 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0056
                CTT--HHHHHHHHHHHHHH--.SSS.BSHHHCHHHHHHHCTS---HHHHHHHHHH CS
     DUF3349 31 rrrLsdeevkevaeelvaeaaeadeavdeedieelitkvteeepseedvarVaar 85
                + +L++e+v+e  e++   +++ d++++++++++++++   ++pse++++ + ++
  KHJ31687.1  2 ADSLTEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRS-LGQNPSESELQDMINE 55
                578*********99998888899*********988765.6789999999876655 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.44
                 HHHHHHHHCTT--HHHHHHHHHHHHHH--..SSS.BSHHHCHHHHHH CS
     DUF3349  23 yvpLlalLrrrLsdeevkevaeelvaeaa.eadeavdeedieelitk 68 
                     l +++r+++d + +e ++e  +  + ++++ +++++++ ++t+
  KHJ31687.1  66 FPEFLTMMARKMKDTDSEEEIREAFKVFDrDNNGFISAAELRYVMTS 112
                 55678888888887776666666555554356777777777776665 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.029
                 HHHCTT--HHHHHHHHHHHHHH--.SSS.BSHHH CS
     DUF3349  28 alLrrrLsdeevkevaeelvaeaaeadeavdeed 61 
                   + ++L+d+ev+e+++e  +++   d+++d ++
  KHJ31687.1 111 TSIGEKLTDDEVDEMIREADQDG---DGRIDYNE 141
                 556789***********999988...55665554 PP

>> Dockerin_1  Dockerin type I domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.7    0.0048       3.3       2      50 ..      20      69 ..      19      75 .. 0.82
   2 !   11.5   0.9   0.00039      0.27       3      53 ..      94     145 ..      70     148 .. 0.89

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0048
                TETTSSSC-SHHHHHHHHHHCT.SSEBTTSCCCHGGGSTT-SSCESHHHH CS
  Dockerin_1  2 gDVNgDgkVnalDalliinyln.qregqssssngkaaDvNgDGrvnalDa 50
                +D +gDg+++   +  + + l  + ++++ + + +  D +++G+++   +
  KHJ31687.1 20 FDKDGDGQITTKELGTVMRSLGqNPSESELQDMINEVDADNNGTIDFPEF 69
                6889*****************9666677778889999******9986555 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00039
                 ETTSSSC-SHHHHHHHHHHCT.SSEBTTSCCCHGGGSTT-SSCESHHHHHHH CS
  Dockerin_1   3 DVNgDgkVnalDalliinyln.qregqssssngkaaDvNgDGrvnalDallv 53 
                 D +++g ++a  +  +   +  + ++++ +++ + aD +gDGr++   + ++
  KHJ31687.1  94 DRDNNGFISAAELRYVMTSIGeKLTDDEVDEMIREADQDGDGRIDYNEFVQL 145
                 778888888888888888888877899999***************9888877 PP

>> DUF4497  Protein of unknown function (DUF4497)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.028        19      71     104 ..       9      43 ..       2      43 .. 0.87
   2 !    9.2   0.0    0.0024       1.6      56     106 ..      67     118 ..      46     119 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.028
     DUF4497  71 vsktikgtfpLkdedgq.tvGeislylRlsclGks 104
                  +  +k  f L+d+dg+ ++ + +l + + +lG++
  KHJ31687.1   9 QVSEFKEAFSLFDKDGDgQITTKELGTVMRSLGQN 43 
                 56789************999999999999999985 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0024
     DUF4497  56 nklikevkekkknepvsktikgtfpLkdedgq.tvGeislylRlsclGksii 106
                  +++ ++++k+k + + + i+  f+++d d++  +   +l + +++ G++++
  KHJ31687.1  67 PEFLTMMARKMKDTDSEEEIREAFKVFDRDNNgFISAAELRYVMTSIGEKLT 118
                 4556667777888889999*****************************9986 PP

>> DUF5580  Family of unknown function (DUF5580)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   1.4e-05    0.0099     288     386 ..      50     147 ..      12     149 .] 0.81

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.4e-05
     DUF5580 288 kstapqdsssesevnkslleiLkmalktakgklnlenLnlsFrkeDrsfsGlLpppkvraiCgkhglyltlslletllnhqdlgyqdeikWqnfvelLs 386
                 +  + ++ + +++ + ++ e L m  +++k+  + e+++ +F+  Dr   G+++ +++r +    g  lt   ++ ++   d    + i +++fv+l+ 
  KHJ31687.1  50 Q-DMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRYVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLMM 147
                 2.223334444445557889999999999999999************************************************************9975 PP

>> EF-hand_14  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0    0.0095       6.5       6      47 ..      17      58 ..      14      86 .. 0.90
   2 ?    6.0   0.1     0.021        15       6      53 ..      90     137 ..      87     149 .] 0.83

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0095
  EF-hand_14  6 fdlfkdeetdklsvakllkaLaetGirkdDpRLkellkklkk 47
                f lf++++++++  ++l +++++ G + +   L+++++++  
  KHJ31687.1 17 FSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDA 58
                899********************************9999875 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.021
  EF-hand_14   6 fdlfkdeetdklsvakllkaLaetGirkdDpRLkellkklkkvekeks 53 
                 f++f++++++ +s a+l  ++ + G + +D  ++e++++  +  + + 
  KHJ31687.1  90 FKVFDRDNNGFISAAELRYVMTSIGEKLTDDEVDEMIREADQDGDGRI 137
                 899999******************************998877666555 PP

>> Poly_export  Polysaccharide biosynthesis/export protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0    0.0003      0.21      29      70 ..      51      92 ..      23     102 .. 0.84
   2 ?   -1.3   0.0       3.9   2.7e+03      55      67 ..     117     129 ..     114     140 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.0003
  Poly_export 29 qalqgylVdpdGtIslPllGkikvaGltveelreeieeklsk 70
                 + ++++  d++GtI++P   ++ +  +  ++ +eei+e+++ 
   KHJ31687.1 51 DMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKV 92
                 45667778999***************************9954 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 3.9
  Poly_export  55 ltveelreeieek 67 
                  lt +e+ e+i+e+
   KHJ31687.1 117 LTDDEVDEMIREA 129
                  6778888888875 PP

>> SurA_N_2  SurA N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0      0.05        34      96     137 ..      30      65 ..      24      73 .. 0.75
   2 ?    9.1   0.2    0.0016       1.1      90     144 ..      97     145 ..      60     146 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.05
    SurA_N_2  96 eklleqeaeklGltvsdeelqdaiqgnpaikqsFqpetGkFd 137
                  k l   +++lG + s++elqd+i++  a      +++G +d
  KHJ31687.1  30 TKELGTVMRSLGQNPSESELQDMINEVDA------DNNGTID 65 
                 5556677899**************99776......4666666 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0016
    SurA_N_2  90 ldqlvseklleqeaeklGltvsdeelqdaiqgnpaikqsFqpetGkFdkeklkqf 144
                  + ++s + l+  + ++G + +d+e++++i++  +      + +G++d +++ q+
  KHJ31687.1  97 NNGFISAAELRYVMTSIGEKLTDDEVDEMIREADQ------DGDGRIDYNEFVQL 145
                 5677888888889999****************999......79999999999886 PP

>> RuvA_C  RuvA, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.73     5e+02      16      30 ..      45      60 ..      30      65 .. 0.81
   2 ?    1.7   0.0      0.52   3.6e+02      31      44 ..      78      91 ..      70      93 .. 0.85
   3 ?    7.1   0.0     0.011       7.4      17      42 ..     103     129 ..     102     129 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.73
                -HHHHHHHHHHHHC.- CS
      RuvA_C 16 kekeaekAvakvla.n 30
                +e e + ++++v+a n
  KHJ31687.1 45 SESELQDMINEVDAdN 60
                5789999999998743 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.52
                TTS-HHHHHHHHHC CS
      RuvA_C 31 pgasveelIraALk 44
                +++++ee Ir+A k
  KHJ31687.1 78 KDTDSEEEIREAFK 91
                67899999***987 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.011
                 HHHHHHHHHHHHC.-TTS-HHHHHHHH CS
      RuvA_C  17 ekeaekAvakvla.npgasveelIraA 42 
                 ++e +++ +++ +  +++ v+e+Ir+A
  KHJ31687.1 103 AAELRYVMTSIGEkLTDDEVDEMIREA 129
                 6899999999977666666*******9 PP

>> YqeY  Yqey-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0         1     7e+02     108     123 ..      26      41 ..       2      47 .. 0.69
   2 ?   11.0   0.2   0.00048      0.33      28     103 ..      51     129 ..      47     146 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 1
                 T--BGGGHHHHHHHHH CS
        YqeY 108 gaesmkdmGkvmkalk 123
                 g+ ++k++G vm  l 
  KHJ31687.1  26 GQITTKELGTVMRSLG 41 
                 4557899999998775 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00048
                 HHHHHHHHHTTSS--HHHHHHHHHHHHHH...HHHHHHHHHHHT-HHHHHHHHHHHHHHGGGS-----HHHHHHHHHHH CS
        YqeY  28 aaikqeevderkelsdeevlkvlakevkq...RresieefekagRedlaekekaEievleeYlPeqlseeeiealvkea 103
                   i++ + d++ +++  e l+++a+++k     +e  e+f+  +R++     +aE++ + + + e+l+++e++++++ea
  KHJ31687.1  51 DMINEVDADNNGTIDFPEFLTMMARKMKDtdsEEEIREAFKVFDRDNNGFISAAELRYVMTSIGEKLTDDEVDEMIREA 129
                 5677788888889999999*****9999722245677889999*********************************997 PP

>> dCache_2  Cache domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.14        96     235     259 ..      42      66 ..       8      76 .. 0.67
   2 ?    8.3   0.1    0.0016       1.1     188     260 ..      81     140 ..      66     142 .. 0.71

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.14
    dCache_2 235 kdkkgkllqelleaakkkgegfveY 259
                 +++++++lq++++  +++++g++++
  KHJ31687.1  42 QNPSESELQDMINEVDADNNGTIDF 66 
                 3344444888888888888888876 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0016
    dCache_2 188 elkqellktlksirygnngyifiydtdgniilhplkkelngknllevkdkkgkl.lqelleaakkkgegfveYk 260
                 + ++e+++ +k +  +nng+i +     +++                 +k  ++ + e+++ a+++g+g+++Y+
  KHJ31687.1  81 DSEEEIREAFKVFDRDNNGFISAAELRYVMTSIG--------------EKLTDDeVDEMIREADQDGDGRIDYN 140
                 4447777777777777777777777777666666..............33333369*****************7 PP

>> MotA_activ  Transcription factor MotA, activation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.45   3.1e+02      60      76 ..      19      35 ..      13      48 .. 0.84
   2 ?    8.2   0.0    0.0038       2.6      28      69 ..      98     137 ..      89     147 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.45
                SEEEETTEEEE-HHHHH CS
  MotA_activ 60 lveksgdgliitgeaqd 76
                l +k gdg i t e   
  KHJ31687.1 19 LFDKDGDGQITTKELGT 35
                789*******9998655 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0038
                 STTB-HHHHHHT-TTS-HHHHHHHHHHHHHTTSEEEETTEEE CS
  MotA_activ  28 kdfitaaevrevhpdlgnavvnsnigvlikkglveksgdgli 69 
                 + fi+aae+r v   +g+ + + ++  +i+    ++ gdg i
  KHJ31687.1  98 NGFISAAELRYVMTSIGEKLTDDEVDEMIREA--DQDGDGRI 137
                 57***********************9999975..67788876 PP

>> RloB  RloB-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.61   4.2e+02      59      76 ..       9      27 ..       2      38 .. 0.76
   2 ?    9.7   0.2    0.0013      0.89      53      80 ..      58     104 ..      31     119 .. 0.69

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.61
        RloB 59 yeeeydkvwcVfDrD.ksk 76
                + +e+++ + +fD+D + +
  KHJ31687.1  9 QVSEFKEAFSLFDKDgDGQ 27
                5678999********5444 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0013
        RloB  53 el..................kkekyeeeydkvwcVfDrD.kskdfea 80 
                 +                   k+ ++eee+ + + VfDrD + + + a
  KHJ31687.1  58 ADnngtidfpefltmmarkmKDTDSEEEIREAFKVFDRDnNGFISAA 104
                 3344555555555555555688999**************66665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       852  (0.0475208); expected 358.6 (0.02)
Passed bias filter:                      610  (0.0340231); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 1032.50
//
Query:       KHJ31688.1  [L=325]
Description: putative snare complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-14   53.6   0.3    2.9e-14   52.8   0.3    1.4  1  SNARE           SNARE domain
  ------ inclusion threshold ------
       0.06   13.2   0.2       0.39   10.6   0.2    2.1  1  Dak2            DAK2 domain
      0.065   13.9   3.9       0.66   10.7   0.3    3.1  3  DNA_repr_REX1B  DNA repair REX1-B
      0.085   12.5   9.2       0.31   10.7   9.2    1.9  1  Syntaxin        Syntaxin
        1.7    8.6   5.4        1.6    8.6   3.9    1.7  2  VPDSG-CTERM     VPDSG-CTERM motif
        2.8    8.6   6.5        1.1    9.9   0.3    3.0  4  SlyX            SlyX
        6.5    7.3  10.6         11    6.6   1.2    2.6  2  DUF16           Protein of unknown function DUF16


Domain annotation for each model (and alignments):
>> SNARE  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   0.3   1.1e-17   2.9e-14       1      53 []     264     316 ..     264     316 .. 0.98

  Alignments for each domain:
  == domain 1  score: 52.8 bits;  conditional E-value: 1.1e-17
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXXXXXXXXXXXXXXXXXXXX CS
       SNARE   1 emvDrIdtnVenaqsnveraqkeLkkavkyqksnRklkciillilviillvvl 53 
                 +m+DrId+nVe+ ++nv++a keL+ a  yqk+  +   i+llil+++++++l
  KHJ31688.1 264 TMLDRIDYNVESMSNNVKSADKELNVAISYQKKGTRRRAIFLLILLVLGMFIL 316
                 7**************************************************96 PP

>> Dak2  DAK2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.2   0.00015      0.39      59     119 ..     225     287 ..     148     300 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00015
                 HHHHHC.....TT---HHHHHHHHHHHHHHHH---TTSSSTHHHHHHHHHHHHT......... CS
        Dak2  59 alakalkekeeldaedlaaalkaaleaiqavgkarpgdkTmlDvlrpavealekakd..gedl 119
                  +++a+  ++e +++d+a+ + + ++  q++  + + ++TmlD ++  ve+++++ +  +++l
  KHJ31688.1 225 DFSDAIISQREREINDIAQGIIELADIFQELQTMIIDQGTMLDRIDYNVESMSNNVKsaDKEL 287
                 5667777777789***************************************99554233333 PP

>> DNA_repr_REX1B  DNA repair REX1-B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       3.8   9.7e+03      49      61 ..      68      80 ..      65      92 .. 0.74
   2 ?   10.7   0.3   0.00026      0.66      29      67 ..     105     143 ..      89     149 .. 0.83
   3 ?    2.6   0.2     0.087   2.2e+02      27      58 ..     206     239 ..     199     261 .. 0.60

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3.8
  DNA_repr_REX1B 49 eiSkevleieaaL 61
                    +iS++v ei +++
      KHJ31688.1 68 DISDQVTEILKNV 80
                    7888888887765 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00026
  DNA_repr_REX1B  29 ksgaeeeykqlvkevTeefseiSkevleieaaLreeasr 67 
                     k ++e e + l++++T++f+e+ + +++ie  +re++++
      KHJ31688.1 105 KRQEEIEIEFLTQDITKSFHECQRAIQKIEVLVRESKAQ 143
                     566677788899******************999997554 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.087
  DNA_repr_REX1B  27 ylksgaeeeykqlvkevTeefse..iSkevleie 58 
                     +++++a+++y ql+ + T++fs+  iS++ +ei+
      KHJ31688.1 206 VQETNADKHYSQLTLQKTSDFSDaiISQREREIN 239
                     4567777779999999999998733454433332 PP

>> Syntaxin  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   9.2   0.00012      0.31       8     200 .]      73     263 ..      67     263 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00012
    Syntaxin   8 veeikkeiekleeevkklkkqneesktstraksvklkk..rmesdikeikkraesvkarLeaLdksnkenekksgegsavdRirksqtaaLrkklkevm 104
                 v ei k+++   +++++l++q+  ++   + ++vk ++  ++e ++++i+k+ +++++ +++++  ++e++++ g ++ ++ +++ +  +L  k +e+ 
  KHJ31688.1  73 VTEILKNVAFKGQKLDRLHQQH--VLPGFNDEDVKRQEeiEIEFLTQDITKSFHECQRAIQKIEVLVRESKAQGGISKGEEIMARNIQISLAGKVQEAS 169
                 4444444444445555555444..4455566666544411566789*************************999************************* PP

    Syntaxin 105 teynelrekireeykerieRrlevtGkevseeeieelietgesevflqkllqeqrga.realseieeRhkevlelekslkeLhqlFldmavLVEeQG 200
                  ++++ +++  ++ +      + + G++ +    ++ +++ + +   ++l  ++ +   +a+  i +R +e+ ++ + + eL ++F ++ +++  QG
  KHJ31688.1 170 ASFRKKQSTYLKKLRGASGINAPIDGTSLNTFS-DRSVQETNADKHYSQLTLQKTSDfSDAI--ISQREREINDIAQGIIELADIFQELQTMIIDQG 263
                 ****************99999999999987765.6666666677777777666655545665..9**************************999998 PP

>> VPDSG-CTERM  VPDSG-CTERM motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0         2   5.2e+03       4       9 ..     261     266 ..     261     266 .. 0.90
   2 ?    8.6   3.9   0.00063       1.6       9      25 ..     306     322 ..     306     322 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2
  VPDSG-CTERM   4 DsGSTl 9  
                  D+G++l
   KHJ31688.1 261 DQGTML 266
                  9***97 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00063
  VPDSG-CTERM   9 laLLglgLlgLlglRRr 25 
                  l+LL lg+++Ll+l+R+
   KHJ31688.1 306 LILLVLGMFILLMLKRK 322
                  68**************8 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1      0.67   1.7e+03      17      39 ..      71      93 ..      65      98 .. 0.69
   2 ?   -1.4   0.2       1.5   3.9e+03      14      34 ..      91     111 ..      87     127 .. 0.72
   3 ?   -0.8   0.1      0.93   2.4e+03      31      50 ..     117     136 ..     105     151 .. 0.51
   4 ?    9.9   0.3   0.00043       1.1      13      53 ..     246     286 ..     234     295 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.67
                HHHHHHHHHHHHHHHHHHHHHHH CS
        SlyX 17 dtieeLndvvaeqqqqidrlqrq 39
                d++ e  + va   q++drl++q
  KHJ31688.1 71 DQVTEILKNVAFKGQKLDRLHQQ 93
                55666666677777888888877 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.5
                 HHHHHHHHHHHHHHHHHHHHH CS
        SlyX  14 fqedtieeLndvvaeqqqqid 34 
                 +q++++   nd+ ++ q++i+
  KHJ31688.1  91 HQQHVLPGFNDEDVKRQEEIE 111
                 666666666777666666664 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.93
                 HHHHHHHHHHHHHHHT-XXX CS
        SlyX  31 qqidrlqrqlrllaerlkel 50 
                 q+i++  +++++  ++++ l
  KHJ31688.1 117 QDITKSFHECQRAIQKIEVL 136
                 33333334444444444333 PP

  == domain 4  score: 9.9 bits;  conditional E-value: 0.00043
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXX CS
        SlyX  13 afqedtieeLndvvaeqqqqidrlqrqlrllaerlkelees 53 
                   + d  +eL+ ++++q   +dr+   ++ + +++k+++++
  KHJ31688.1 246 IELADIFQELQTMIIDQGTMLDRIDYNVESMSNNVKSADKE 286
                 5678999****************************998776 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   2.4     0.014        35      31      78 ..      93     146 ..      67     164 .. 0.77
   2 ?    6.6   1.2    0.0042        11      40      99 ..     228     287 ..     198     292 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.014
                 .......BHHHHHHHHH.HHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.. CS
       DUF16  31 s......nkqrLkkiea.kvdklgeqinkleqkvekqgekikelkveqkaqgeel 78 
                 +      n++++k+ e+ +++ l + i k  ++ ++  +ki+ l  e kaqg  +
  KHJ31688.1  93 QhvlpgfNDEDVKRQEEiEIEFLTQDITKSFHECQRAIQKIEVLVRESKAQGG-I 146
                 245556678888776543899999***************************97.4 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0042
                 HHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHH CS
       DUF16  40 eakvdklgeqinkleqkvekqgekikelkveqkaqgeelnkvdetleliletLqkinkRl 99 
                 +a +++++ +in ++q + ++ +  +el+  +  qg  l+++d  +e++ + +++ +k l
  KHJ31688.1 228 DAIISQREREINDIAQGIIELADIFQELQTMIIDQGTMLDRIDYNVESMSNNVKSADKEL 287
                 344556777899999999999999999999999999999999999999998888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1311  (0.0731218); expected 358.6 (0.02)
Passed bias filter:                      706  (0.0393775); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 2313.02
//
Query:       KHJ31689.1  [L=454]
Description: hypothetical protein EV44_g3301 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-14   54.3   0.0    1.8e-13   50.7   0.0    2.0  2  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.0     1e-17   1.8e-13      16     177 ..       5     167 ..       2     194 .. 0.82
   2 ?    1.2   0.0     0.013   2.4e+02     124     176 ..     247     299 ..     237     315 .. 0.82

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 1e-17
       RVT_2  16 gsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaaeeelvvhqldvdsafLnae..ldeevyvkqPpGfeidreeekv 112
                  +r+v  +k+   ++   k+rlv+q ++         + +P ++  s r++lalaa+    ++  d+  a+++++  l  ++yv++Pp        e +
  KHJ31689.1   5 KKRFVDDIKHRGTEKEYAKSRLVVQMYKDDQKNSV-LTQSPTLQRVSQRIILALAAMLPCDLFLRDITQAYVQSTtnLSRDIYVRPPPELGSH---EII 99 
                 678888899878888888*********98776655.5899********************************997225566*******88766...99* PP

       RVT_2 113 ykLnkslyGlkqapllW.nekidkvLkklgferseaesGlyvrgtgegk..livalyvddlliagsdi 177
                  kL+k lyG+  a+  W ++  +++ +kl + +s+    l + +++++    +v+l  dd l  +++ 
  KHJ31689.1 100 LKLQKPLYGVPEAGNHWlYTYYKHLTEKLSLIPSTFDPCLLCSSDSDADefGVVGLQTDDTLFLANQK 167
                 *****************445555556789***************999876569*******87765432 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.013
       RVT_2 124 qapllWnekidkvLkklgferseaesGlyvrgtgegklivalyvddlliagsd 176
                 qa +l n+ i+++ k l+++ +++e Gl      ++ + + ++ d  +   +d
  KHJ31689.1 247 QAVRLNNTDINSLNKRLKWQLENSERGLRYVELDKSSIELVVFTDSSFANNKD 299
                 999999*********************96666677778778888877766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (454 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3261.44
//
Query:       KHJ31690.1  [L=283]
Description: hypothetical protein EV44_g3880 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.3e-05   22.8   0.0    0.00016   21.9   0.0    1.5  1  rve       Integrase core domain
  ------ inclusion threshold ------
      0.014   14.2   0.2      0.018   13.8   0.2    1.1  1  SAPS      SIT4 phosphatase-associated protein


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   1.7e-08   0.00016      67     117 ..       4      54 ..       1      56 [. 0.96

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 1.7e-08
         rve  67 pervlsDngseytskafrefladlgirvsftrpgrpqdnGkvErfhrtlkd 117
                 p+++++D gs +t k+f+  + ++ + v++ ++   ++ G+vEr h +l++
  KHJ31690.1   4 PDYIVTDAGSNFTGKEFHLCATSMAVCVKNIPVEAHWSIGLVERYHALLRR 54 
                 899*********************************************998 PP

>> SAPS  SIT4 phosphatase-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.2     2e-06     0.018     226     335 ..      48     279 ..      43     282 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2e-06
        SAPS 226 iaeLLhcsnmallnekkgeeivkerDevrerlleel................tse.....................eealedvs............... 272
                 +  LL+ s +++ +e kge+   +rD++++   ++                   +                     ++a+e++s               
  KHJ31690.1  48 YHALLRRSYEIIYQELKGES--LSRDNILQMAVKSIndtagpnrliptllvfG-AfprmtqldppalsiiqrasaiRKAMEEISklkakfkvndalnhr 143
                 66799999999999988888..5889999888877755555555555444440.044444555555566666666688888888888888888899999 PP

        SAPS 273 .........................................................................deaskeesaesedltdkdedvslees 298
                                                                                          ++++++++ es+++ ++++++s++++
  KHJ31690.1 144 ngpetsqvhelplnsvvlvwreaksgkpgkwkgphtligiedetclielpsgptkfrstsvrpyyniaeisknNDNDNSTNGESNNTGKDESKMSINTN 242
                 99*******************************************************999999999999998545555555566667777788999999 PP

        SAPS 299 ksakdenkesdesesdtaeesseededdasseesala 335
                 ++++d++ + + ++++++e++ ++ + +++  ++++a
  KHJ31690.1 243 SNDNDNKPQVSGQKTSQTEQQMTAPRRNQPRTRKLPA 279
                 9999988888888888888888888877777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1147  (0.0639746); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2138.76
//
Query:       KHJ31691.1  [L=267]
Description: hypothetical protein EV44_g3822 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-05   25.7   0.0    2.1e-05   24.7   0.0    1.5  1  rve       Integrase core domain
    1.8e-05   24.5   0.0    3.1e-05   23.7   0.0    1.4  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   2.3e-09   2.1e-05      63     116 ..      19      71 ..       1      72 [. 0.87

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 2.3e-09
         rve  63 ggvepervlsDngseytskafrefladlgirvsftrpgrpqdnGkvErfhrtlk 116
                  g+ p++++ D gs + sk+fr+++++l i+++  ++ ++++  +vEr h+ l+
  KHJ31691.1  19 LGS-PDIITHDAGSNFSSKEFRQTAKSLAIEIKEIPVKSANSMSIVERYHKPLR 71 
                 344.9*********************************************9875 PP

>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.0   3.5e-09   3.1e-05      72     225 ..      88     243 ..      64     252 .. 0.75

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 3.5e-09
       RVT_2  72 eeelvvhqldvdsafLna..eldeevyvkqPpGfeidreeekvykLnkslyGlkqapllWneki.dkvLkklgferseaesGlyvrgtgegklivalyv 167
                 e++  v q+ v++a+ ++  +l  e yv++P   +     e   k+ + lyG+  a++ W+++  d+ + +l++e+s+    l +      + iv+l  
  KHJ31691.1  88 EQKSFVLQMAVKAAYTQSksHLAREFYVRPPKELKLP--AETLLKVLRPLYGVPEAGTHWFRTYhDHHIYNLDLEPSSYDPCLLFSH----EAIVGLQT 180
                 67889**********9752268999******999988..899******************98762567999********99999877....789***** PP

       RVT_2 168 ddlliagsdikiledvkkel.akkfklkdlgkvskfLGieiaq.....eaggiklsladyiakv 225
                 dd + a + ++  ++  +el  +kf+   + k+     i+i          +i ++++d i+k+
  KHJ31691.1 181 DDTIAACN-TEFRHKEEEELqRAKFDAMPIQKLTINSPININGahislLDTTISVTQHDQISKI 243
                 **866555.4544444555515788877777665555444432111113455666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       804  (0.0448435); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.31s 00:00:00.80 Elapsed: 00:00:00.47
# Mc/sec: 1704.65
//
Query:       KHJ31692.1  [L=621]
Description: putative leucine rich repeat domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-11   43.3   9.9    5.1e-09   35.8   2.4    3.7  4  LRR_8     Leucine rich repeat
    4.7e-11   42.7   7.5    0.00044   20.6   1.4    4.4  5  LRR_4     Leucine Rich repeats (2 copies)
    1.8e-05   24.6  11.5        2.5    9.0   0.2    6.3  5  LRR_1     Leucine Rich Repeat
    8.4e-05   22.3  12.8        1.4    9.2   0.1    5.7  5  LRR_6     Leucine Rich repeat
     0.0011   18.5   0.6      0.033   13.7   1.0    2.5  3  LRR_9     Leucine-rich repeat


Domain annotation for each model (and alignments):
>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.6   9.2e+03      19      27 ..     161     169 ..     159     171 .. 0.60
   2 ?   -1.9   0.0       0.8   2.9e+03      16      28 ..     231     243 ..     229     258 .. 0.75
   3 !   35.8   2.4   1.4e-12   5.1e-09       3      60 ..     425     482 ..     423     483 .. 0.93
   4 !    9.8   0.1   0.00018      0.66       3      59 ..     497     552 ..     495     554 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.6
                 TSSTT-TT- CS
       LRR_8  19 eaFkglsnL 27 
                 ++F+g+s+L
  KHJ31692.1 161 SVFSGMSSL 169
                 456666665 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.8
                 E-TTSSTT-TT-- CS
       LRR_8  16 lddeaFkglsnLk 28 
                 ++ +aFk++s+L+
  KHJ31692.1 231 VPLHAFKNVSALE 243
                 6667888888776 PP

  == domain 3  score: 35.8 bits;  conditional E-value: 1.4e-12
                 -SEEE-TTS--SEE-TTSSTT-TT.--EEE--SS---GGGGGGGTT--S-.EEE--SS- CS
       LRR_8   3 LtsLdLsnNrltslddeaFkglsn.LkvLdLsnNllttlspgafsgLpsLrsLdLsgNr 60 
                 L+ L+Ls+N +ts+  ++   lsn L +LdLs+N l  + p+++++L++Lr L+Ls++ 
  KHJ31692.1 425 LKHLSLSDNGITSITASSLVPLSNtLHSLDLSYNHLVEI-PDCLASLTALRALNLSYCM 482
                 89*******************7765889***********.9***************986 PP

  == domain 4  score: 9.8 bits;  conditional E-value: 0.00018
                 -SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---G.GGGGGGTT--S-.EEE--SS CS
       LRR_8   3 LtsLdLsnNrltslddeaFkglsnLkvLdLsnNlltt.lspgafsgLpsLrsLdLsgN 59 
                  t L+L++Nrl sl     ++ls L+ Ld+++N l+  ++   + g p + ++ +sgN
  KHJ31692.1 497 ITALNLRSNRLISLAG--IERLSPLERLDIRDNFLKDpMELSRLTGIPEIHEIWVSGN 552
                 6788999999888865..6788999999999998877677777777777777777766 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   1.4   1.2e-07   0.00044       3      38 ..     425     462 ..     424     469 .. 0.85
   2 !   18.5   0.8   5.4e-07    0.0019       3      39 ..     450     486 ..     448     496 .. 0.88
   3 !   13.1   0.4   2.7e-05     0.098       1      42 [.     471     513 ..     471     517 .. 0.83
   4 !   11.0   0.1   0.00012      0.44       3      38 ..     497     531 ..     495     532 .. 0.86
   5 !    9.0   0.0   0.00056         2       3      34 ..     519     553 ..     519     559 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 1.2e-07
                 --EEE--SS---E-S-..HHH-TT.--EEE-.-S----- CS
       LRR_4   3 LevLdLsnNqltdipl..leklpn.LkeLdLsgNnlitd 38 
                 L++L+Ls+N +t+i    l  l n L++LdLs N  +  
  KHJ31692.1 425 LKHLSLSDNGITSITAssLVPLSNtLHSLDLSYN-HLVE 462
                 99**************77668**********999.4434 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 5.4e-07
                 --EEE--SS---E-S-.HHH-TT--EEE-.-S-----G CS
       LRR_4   3 LevLdLsnNqltdipl.leklpnLkeLdLsgNnlitdl 39 
                 L +LdLs N+l +ip  l++l+ L+ L+Ls +  i++l
  KHJ31692.1 450 LHSLDLSYNHLVEIPDcLASLTALRALNLSYC-MIRTL 486
                 889*************9999*********998.66655 PP

  == domain 3  score: 13.1 bits;  conditional E-value: 2.7e-05
                 SS--EEE--SS---E-S-.HHH.-TT--EEE-.-S-----GGGG CS
       LRR_4   1 pnLevLdLsnNqltdipl.lek.lpnLkeLdLsgNnlitdldeL 42 
                 + L+ L+Ls ++++++   +e+ lp  + L+L +N ++ +l ++
  KHJ31692.1 471 TALRALNLSYCMIRTLHTlIENpLPAITALNLRSN-RLISLAGI 513
                 579************99965588*********555.77788665 PP

  == domain 4  score: 11.0 bits;  conditional E-value: 0.00012
                 --EEE--SS---E-S-HHH-TT--EEE-.-S----- CS
       LRR_4   3 LevLdLsnNqltdiplleklpnLkeLdLsgNnlitd 38 
                  + L+L++N+l ++ ++e l  L+ Ld+ + n+++d
  KHJ31692.1 497 ITALNLRSNRLISLAGIERLSPLERLDI-RDNFLKD 531
                 688*************888*********.6658865 PP

  == domain 5  score: 9.0 bits;  conditional E-value: 0.00056
                 --EEE--SS---E-S-.....HHH-TT--EEE-.-S- CS
       LRR_4   3 LevLdLsnNqltdipl.....leklpnLkeLdLsgNn 34 
                 Le Ld+++N l+d  +     l ++p  +e+++sgN+
  KHJ31692.1 519 LERLDIRDNFLKD--PmelsrLTGIPEIHEIWVSGNP 553
                 899*********9..888655559************3 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.1    0.0016       5.9       2      20 ..     425     443 ..     424     446 .. 0.89
   2 !    9.0   0.2   0.00069       2.5       2      23 .]     450     470 ..     449     470 .. 0.89
   3 ?    3.5   0.1     0.045   1.6e+02       2      12 ..     473     483 ..     472     494 .. 0.81
   4 ?    1.2   0.0      0.24   8.7e+02       4      14 ..     499     509 ..     496     517 .. 0.82
   5 ?    5.2   0.1     0.012        42       2      12 ..     519     529 ..     518     561 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0016
       LRR_1   2 LrhLdLsnnpllglppnsf 20 
                 L+hL Ls+n +++++++s+
  KHJ31692.1 425 LKHLSLSDNGITSITASSL 443
                 9***********9999987 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00069
       LRR_1   2 LrhLdLsnnpllglppnsfqnL 23 
                 L +LdLs+n+l   +p+++ +L
  KHJ31692.1 450 LHSLDLSYNHL-VEIPDCLASL 470
                 99*********.8999999776 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.045
       LRR_1   2 LrhLdLsnnpl 12 
                 Lr L+Ls++ +
  KHJ31692.1 473 LRALNLSYCMI 483
                 99*******87 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.24
       LRR_1   4 hLdLsnnpllg 14 
                  L+L++n+l++
  KHJ31692.1 499 ALNLRSNRLIS 509
                 69******965 PP

  == domain 5  score: 5.2 bits;  conditional E-value: 0.012
       LRR_1   2 LrhLdLsnnpl 12 
                 L++Ld+++n+l
  KHJ31692.1 519 LERLDIRDNFL 529
                 99********9 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.1   0.00039       1.4       4      17 ..     424     437 ..     423     444 .. 0.86
   2 !    7.1   1.4    0.0018       6.3       2      15 ..     447     460 ..     446     461 .. 0.90
   3 ?    2.5   0.0     0.053   1.9e+02       5      14 ..     473     482 ..     469     485 .. 0.84
   4 !    5.9   0.1    0.0043        15       5      23 ..     497     516 ..     495     517 .. 0.89
   5 ?    1.3   0.0      0.13   4.6e+02       4      13 ..     518     527 ..     515     532 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00039
       LRR_6   4 hLteLdLsgNdIgD 17 
                  L++L+Ls+N+I+ 
  KHJ31692.1 424 FLKHLSLSDNGITS 437
                 69**********95 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0018
       LRR_6   2 nthLteLdLsgNdI 15 
                 +++L +LdLs+N++
  KHJ31692.1 447 SNTLHSLDLSYNHL 460
                 689*********86 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.053
       LRR_6   5 LteLdLsgNd 14 
                 L++L+Ls++ 
  KHJ31692.1 473 LRALNLSYCM 482
                 99******95 PP

  == domain 4  score: 5.9 bits;  conditional E-value: 0.0043
       LRR_6   5 LteLdLsgNd.IgDeGaeaL 23 
                 +t+L+L++N  I+ +G+e L
  KHJ31692.1 497 ITALNLRSNRlISLAGIERL 516
                 599**********9999977 PP

  == domain 5  score: 1.3 bits;  conditional E-value: 0.13
       LRR_6   4 hLteLdLsgN 13 
                  L+ Ld+++N
  KHJ31692.1 518 PLERLDIRDN 527
                 699******9 PP

>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.1    0.0015       5.5      64     124 ..     423     482 ..     413     489 .. 0.78
   2 !   13.7   1.0   9.3e-06     0.033      45     117 ..     451     524 ..     438     537 .. 0.91
   3 !    8.0   0.0   0.00053       1.9      65     136 ..     496     567 ..     492     573 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0015
       LRR_9  64 krlktlllnnnrivria.egleevlPnleelvltnnelqeladldPlaslkklellsllknp 124
                 + lk l+l++n i+ i+   l     +l++l l+ n+l e+ d   lasl  l+ l l  + 
  KHJ31692.1 423 RFLKHLSLSDNGITSITaSSLVPLSNTLHSLDLSYNHLVEIPD--CLASLTALRALNLSYCM 482
                 4589999999999998615677777789999999999999988..78888888888876655 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 9.3e-06
       LRR_9  45 dtidlsdndirkl.dgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklel 117
                  ++dls n + ++ d +  l  l++l l+   i+ +   +e+ lP +++l l +n+l +la ++ l  l++l++
  KHJ31692.1 451 HSLDLSYNHLVEIpDCLASLTALRALNLSYCMIRTLHTLIENPLPAITALNLRSNRLISLAGIERLSPLERLDI 524
                 5789*****999968899**************************************************999975 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.00053
       LRR_9  65 rlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklellsllknpvtnk..keyrlyvi 136
                  + +l l +nr++ +a g+e+ l  le l + +n l++ ++l  l+ +++++ + +  np t+   ++yr  + 
  KHJ31692.1 496 AITALNLRSNRLISLA-GIER-LSPLERLDIRDNFLKDPMELSRLTGIPEIHEIWVSGNPFTKThgHNYRVTIF 567
                 5778999999999886.6665.55599*********************************98762257887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (621 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4244.67
//
Query:       KHJ31693.1  [L=186]
Description: putative secreted effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1419.48
//
Query:       KHJ31694.1  [L=1434]
Description: putative eukaryotic translation initiation factor 4 gamma [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-49  167.7   0.2    2.7e-49  167.7   0.2    2.1  2  MIF4G          MIF4G domain
    6.1e-21   74.4   3.4    6.1e-21   74.4   0.6    2.6  2  eIF_4G1        Eukaryotic translation initiation factor 4G1


Domain annotation for each model (and alignments):
>> MIF4G  MIF4G domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   1.3      0.13   1.2e+03     155     190 ..     573     606 ..     546     640 .. 0.76
   2 !  167.7   0.2     3e-53   2.7e-49       1     209 [.    1004    1245 ..    1004    1248 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.13
                 HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCH CS
       MIF4G 155 ltllttigktlennekakkeldqffkriqkiledat 190
                 +++ t++ k+le  e++ +e+++ +++i+++ +++ 
  KHJ31694.1 573 VKITTNTAKDLE--EEKNDEIERQIAEIEAAELERA 606
                 68889999****..*************999988865 PP

  == domain 2  score: 167.7 bits;  conditional E-value: 3e-53
                  HHHHHHHHHCHTTTTHHHHHHHHHHHHHCS....CHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHSH...................HHHHHH CS
       MIF4G    1 lkkvkgilnklskenfevlikqllklamdd....dknelkevielifekaveepsfsplyarlcgklnsrfq...................qnFrik 74  
                  ++kvk  lnk+++e+f+++ +q+  +a ++    d+++l +vi+l+feka++e +++++ya++c+++  +++                   + Fr++
  KHJ31694.1 1004 QRKVKAALNKMTPEKFDKISDQIFAIAAQSkfeaDGRTLRQVIQLTFEKATDEAHWASMYAKFCKRMLETMSsdikdetildkngevvsggNLFRKY 1100
                  69*********************************************************************************************** PP

                  HHHHHHHHHHHHC....................-S-HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEHHHHHHHHHHHHHGGCCCCSCCHSCHHHHH CS
       MIF4G   75 llnklqeefekry....................eleneleenedgnrrrrlglvrflgelfklkmltskilldclkellssltketaddppqdleei 151 
                  lln++qeefe+ +                     l + +++ ++ ++rr lglv f+gel+kl+mlt++i++ c+ +l +          ++d+ e+
  KHJ31694.1 1101 LLNRCQEEFERGWkidlpekpederaeekteeaALLSDEYYIAAAAKRRGLGLVQFIGELYKLGMLTERIMHQCVMKLVDYK-------GVPDEAEV 1190
                  ********************************99**********************************************93.......3699**** PP

                  HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHCSSSSHHHHHHHHHHHHHH CS
       MIF4G  152 eilltllttigktlennekakkeldqffkriqkiledatrqelssrirfmlkdlielk 209 
                  e l +ll tig +le++e+ ++ +d +f+ri + +++    +l+sr+rfml+d+++l+
  KHJ31694.1 1191 ESLIKLLKTIGANLEASERGRQVMDAYFDRIKSMIKS---ESLPSRLRFMLMDIVDLR 1245
                  *************************************...9****************9 PP

>> eIF_4G1  Eukaryotic translation initiation factor 4G1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.62   5.6e+03       6      29 ..     524     547 ..     521     550 .. 0.75
   2 !   74.4   0.6   6.8e-25   6.1e-21       3      70 .]     746     817 ..     744     817 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.62
     eIF_4G1   6 aeeeptisaflesLksArpiediy 29 
                  +e++ + a+   L sA+pi+ i+
  KHJ31694.1 524 MKEKVMKAAAEDHLTSAKPINPIK 547
                 5666777778889*******8775 PP

  == domain 2  score: 74.4 bits;  conditional E-value: 6.8e-25
     eIF_4G1   3 ekkaeeeptisaflesLksArpiediysvkYPegiesPdpalnkeakk.....yrYdpdFLLQFkdvvkekpd 70 
                 + k+ e+p++sa+l+sLksAr++  +  + YP++i sP+paln +a+k     ++Yd++FLLQF++v+ ekp+
  KHJ31694.1 746 NGKPIEPPQPSAALRSLKSARFLTVLDPMIYPPSISSPNPALN-QAVKdkgrsFKYDKEFLLQFQKVFIEKPS 817
                 56899**************************************.78888**********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2017  (0.112499); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.21u 0.30s 00:00:01.51 Elapsed: 00:00:00.50
# Mc/sec: 8621.87
//
Query:       KHJ31695.1  [L=445]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       794  (0.0442858); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3122.00
//
Query:       KHJ31696.1  [L=213]
Description: hypothetical protein EV44_g0552 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-57  194.3  12.1    2.9e-57  194.0  12.1    1.0  1  Egh16-like  Egh16-like virulence factor


Domain annotation for each model (and alignments):
>> Egh16-like  Egh16-like virulence factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.0  12.1   1.6e-61   2.9e-57       1     183 []      17     190 ..      17     190 .. 0.95

  Alignments for each domain:
  == domain 1  score: 194.0 bits;  conditional E-value: 1.6e-61
  Egh16-like   1 saHgvitkvtGangvngpglgvadgtprdgtsrasgsqaDttvfrdkeikkkkasglGrtlgsgkvniaaeiaklmagaesglptvsaggtltmtvhqv 99 
                 ++Hg+i+k++G+ g+ng+++g++ +tprdgt+r + +qaD t f++ +      +++G+tlg+g+++ ++++ak++ ++++glp+vsagg++ mt+hqv
  KHJ31696.1  17 AGHGAIVKAVGDMGGNGSAIGIDASTPRDGTRRTP-FQADSTRFKNVN-----PDACGETLGGGPNDPTSQVAKVA-QDSNGLPMVSAGGMIMMTLHQV 108
                 59****************************99655.********6555.....689******************99.789******************* PP

  Egh16-like 100 nqDGaGpltckiDststgtdakalqkaevtknvpGkgglsaakntdfplkvqlpagltCtGtvggaknvCivRceNaakaGPFG 183
                 n DGaGp++c+iDst+tgt+   ++k+ev +nvpGk+  s+ak+tdfpl++++ a++tCtG++gg++nvC+vRc+Naa+aGPFG
  KHJ31696.1 109 NGDGAGPYSCMIDSTGTGTG--GWTKMEVATNVPGKNSRSKAKATDFPLTAKIAADQTCTGSMGGMDNVCMVRCNNAANAGPFG 190
                 ***************99888..5789*********************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       249  (0.0138881); expected 358.6 (0.02)
Passed bias filter:                      162  (0.00903564); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1571.02
//
Query:       KHJ31697.1  [L=103]
Description: hypothetical protein EV44_g3176 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       538  (0.0300073); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 783.19
//
Query:       KHJ31698.1  [L=370]
Description: putative allergen asp f 4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0075   16.8   0.1     0.0075   16.8   0.1    2.3  2  Pyocin_S  S-type Pyocin


Domain annotation for each model (and alignments):
>> Pyocin_S  S-type Pyocin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   1.9      0.18   3.2e+03      79      97 ..      85     103 ..      53     146 .. 0.53
   2 !   16.8   0.1   4.2e-07    0.0075      20     109 ..     176     265 ..     168     273 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.18
                 ECCEESS-SSS-TT-TTEE CS
    Pyocin_S  79 ssssttshpaappslpvit 97 
                 +++   ++p++p+++++  
  KHJ31698.1  85 AVPEPAVNPEPPVRAEPAA 103
                 2222222222222222222 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 4.2e-07
                 .EESTBEEECCCEEC....CEEEEEEEESCCSSSTT-EC...........CS-TTC--.EECCEESS-SSS-TT-TTEES-SEEC.....- CS
    Pyocin_S  20 eddesGelkvrvvktggksvpdrVpVrkaqldketgsyeftadgspgvtilwtpaaap.lssssttshpaappslpvitgtpipeeqgeni 109
                 +++  G+ + +v  +g ++++ +++V  a   + t+++    +++p  +++w++aa+p l  +++  ++   + +p ++  +i  e  e++
  KHJ31698.1 176 STPTYGKEVGYVSNVGIPEGSNMIKVETASDHTFTNQFI-NISQEPMTVVIWNKAASPgLRDPMNADPNLGASIAPEHPALTIALEPNESQ 265
                 5788999999*****************************.999999999*********999999999999999999999999987777643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       485  (0.0270511); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2656.71
//
Query:       KHJ31699.1  [L=581]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0025   18.1   0.0       0.92    9.8   0.0    2.5  2  AAA_22        AAA domain
  ------ inclusion threshold ------
      0.016   15.3   0.1       0.22   11.6   0.1    2.3  1  DUF87         Helicase HerA, central domain
      0.037   13.4   0.0      0.065   12.6   0.0    1.3  1  FtsK_SpoIIIE  FtsK/SpoIIIE family
      0.059   13.7   0.0        2.1    8.7   0.0    2.5  3  AAA_16        AAA ATPase domain
      0.066   12.5   0.0       0.13   11.5   0.0    1.5  1  Zeta_toxin    Zeta toxin


Domain annotation for each model (and alignments):
>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00026      0.92       6      28 ..     154     176 ..     150     277 .. 0.83
   2 !    5.8   0.0    0.0045        16      76     120 ..     397     448 ..     377     461 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00026
      AAA_22   6 gilvvtGesGtGKTtllrrlleq 28 
                 ++ +++G  G+GK+++l  lle+
  KHJ31699.1 154 SSAFICGSQGSGKSHTLSCLLEN 176
                 6789*************999886 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0045
      AAA_22  76 eellealeqalrarav..ielliiDEaqh.lr.seealeeLrsllnl...sr 120
                  +l++++ + + ++ +   +++ +DEa++ ++ s ea++  ++ll     +r
  KHJ31699.1 397 CALFNMCLNLFLEQPTnvGRIIALDEAHKyMNsSTEAMTLTSTLLSAirlQR 448
                 56778888888888888889*********77775555555555554334433 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   6.1e-05      0.22      28     209 ..     158     387 ..     154     405 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 6.1e-05
       DUF87  28 ilgsTGsGKSntvavLleelle.......kkgatililDpHGEYgkal...............ekllsekvkvitpspsa..............kdkel 90 
                 i gs GsGKS+t + Lle+ l        +k +  l+l  H  Y +++               +   + kv+v+  +  a              k ++l
  KHJ31699.1 158 ICGSQGSGKSHTLSCLLENCLMksdlsklDKPLAALVL--H--YDSFTsdsrgtpceaaylgsN--PNIKVRVLCSP--AnmesikrtytglnvKIEPL 248
                 77999**************9987888877666677777..3..333333456777777766432..22222222211..13346777777777777788 PP

       DUF87  91 kinpwsldpeelldllee.ddkpaaavqrsvleealdqaka..keekeklssdepveklleelk....................kekeelrklknqaia 166
                 +in  +l+ + +ldl+ + +d+ + +     + ++l++++   + ++  ++++++   +l+ +                     k++++l+++++q   
  KHJ31699.1 249 RINQTDLNTKRMLDLMAVnSDDGSMPLYLHSISRILRELRTeqQLSNLPFNYADFKRAVLQCTLlpgqlgplnqrldtlesfmpKSQTDLQQKSQQESP 347
                 888888888888888888544444444555566666666655556666666666666666666688888888766554444322222222222222222 PP

       DUF87 167 rlldkledllrkggsf......snsstdliallleklekegkitiidls 209
                 ++++k+                 + ++ ++a+  ++  ++g +ti+dls
  KHJ31699.1 348 KKKKKK---------GppvqvnNDRPNHTEASGNNWSIQPGTLTIVDLS 387
                 222222.........2334444556888888888888899999999887 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.8e-05     0.065      29      67 ..     143     181 ..     129     185 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.8e-05
                   -EEEEEGGGS-.SEEEE--TTSSHHHHHHHHHHHHHTT- CS
  FtsK_SpoIIIE  29 nplvldlkkmashllvaGatgsGKStalntLilSlatth 67 
                   +p ++  ++++s   ++G++gsGKS +l  L+ + ++++
    KHJ31699.1 143 DPRIFYNISAPSSAFICGSQGSGKSHTLSCLLENCLMKS 181
                   555666667778889****************99888765 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0   0.00058       2.1      22      47 ..     151     176 ..     147     214 .. 0.80
   2 ?    2.2   0.0     0.057     2e+02     106     162 ..     355     441 ..     276     456 .. 0.64
   3 ?   -3.8   0.0         4   1.4e+04      72     101 ..     484     507 ..     471     536 .. 0.54

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00058
      AAA_16  22 grpelvllsGesGvGKsslvrellra 47 
                 + p++ ++ G +G+GKs  + +ll+ 
  KHJ31699.1 151 SAPSSAFICGSQGSGKSHTLSCLLEN 176
                 567999*****************985 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.057
      AAA_16 106 a...............................avpelagaeasrllellkrll.allsrderplvlvlDdlqwadeaslqllaaLlrll 162
                                                 ++p +++++a +l++ + +l+ ++ ++ +   ++ lD++++   +s +++ ++ +ll
  KHJ31699.1 355 PpvqvnndrpnhteasgnnwsiqpgtltivdlSCPCVTSDAACALFNMCLNLFlEQPTNVG--RIIALDEAHKYMNSSTEAMTLTSTLL 441
                 1555555555555555666767777777777777788888888888888888856666634..6********87777776665555444 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 4
      AAA_16  72 laqalareellrqlldeaesaeleawrekl 101
                 ++++l r+++ +  ++++e      ++ + 
  KHJ31699.1 484 WLKCL-RSHIAALDCNQLEI-----DQSQR 507
                 66666.54555555555222.....22222 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.7e-05      0.13      14      39 ..     151     176 ..     138     188 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.7e-05
  Zeta_toxin  14 erPklillgGqpGAGKselaellkde 39 
                 + P + ++ G++G+GKs++++ l ++
  KHJ31699.1 151 SAPSSAFICGSQGSGKSHTLSCLLEN 176
                 6899***************9988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (581 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       703  (0.0392102); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4062.13
//
Query:       KHJ31700.1  [L=484]
Description: putative l-ornithine n5-oxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     7e-106  354.2   0.0   8.3e-106  354.0   0.0    1.0  1  K_oxygenase    L-lysine 6-monooxygenase (NADPH-requiring)
    1.5e-07   31.0   0.0    1.2e-06   28.0   0.1    2.3  2  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
    2.2e-07   31.0   0.0    1.3e-05   25.2   0.0    2.6  3  NAD_binding_9  FAD-NAD(P)-binding
  ------ inclusion threshold ------
       0.01   14.3   0.0      0.015   13.7   0.0    1.2  1  FMO-like       Flavin-binding monooxygenase-like


Domain annotation for each model (and alignments):
>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  354.0   0.0  1.9e-109  8.3e-106       2     340 ..      48     402 ..      47     404 .. 0.93

  Alignments for each domain:
  == domain 1  score: 354.0 bits;  conditional E-value: 1.9e-109
  K_oxygenase   2 ilDligiGiGpsnLsLailleevk...kelkalflerqpefaWhpgmllegaelqisfLkDlvtlrdPtspfsFlnYlkekgrLykFlnletflpsRk 96 
                  +lDl ++G+Gp++L++ai+le+ +      k+lfle+++ef Whpgm ++ga++qisf+kDl+tlr+P+s+f+F+nYl +k+rL++F+nl+t+lpsR+
   KHJ31700.1  48 TLDLLCVGFGPASLAIAIALEDLEdkkISPKVLFLEKNSEFTWHPGMQIPGAKMQISFIKDLATLRNPRSKFTFINYLFTKQRLNQFINLSTHLPSRA 145
                  69*******************9998777889******************************************************************* PP

  K_oxygenase  97 efedYlrWvasqle..eqvrfgeeveevepdeeeee...elltveskdaegeeeelearnlvlgvGtepkiPevleklegkervvHsseylerkee.. 187
                  e+edYlrW+as++e  +qv++++ev++v+  +++ +   + + v+s d++g++ + +a n+vl+vG++p iP+ l+ ++   +v+Hss++   +++  
   KHJ31700.1 146 EYEDYLRWCASHFEakNQVQYDTEVKSVRAGSQNADgkvTSWIVTSLDSKGNTVTKRACNVVLAVGGKPMIPKELKGIK---NVTHSSQFIPFIKNik 240
                  *************97778***********98865444478899*********************************988...6******987776666 PP

  K_oxygenase 188 ...llakkriaVvGsGqSaaeifedllrrqkkvelklvtrsealeplddspfvneifsPeyvdyfyslpeekreallkeqkatnykgvdaelieelye 282
                     + +k r+aVvG+GqSaaeif++l++ +++++++++++ ++l+p+ddspfvneif++++vd ++ +p+++r a l+ ++ tny++v+++l+e+ly+
   KHJ31700.1 241 shgSGRKFRFAVVGAGQSAAEIFDHLWSVFPESKISMIIKTASLRPSDDSPFVNEIFHADRVDDIFTMPSSQRAASLTFDRGTNYGVVRPALLEHLYD 338
                  777788889***************************************************************************************** PP

  K_oxygenase 283 elyeqkvkg....eerlrllpnrevesaeaegkg.eveltlrn.eesgeeetlevdavvlATGY 340
                  +ly q++ +    ++++ +l+nr++ sa++++++ +v ltl + ++++ +e +evd+++ ATGY
   KHJ31700.1 339 KLYMQRIATplpsQWNACILSNRTIISANETQNRsNVILTLCDsRDNNIRECIEVDYIFAATGY 402
                  *******988887899*************99865577777655056667799************ PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.1   2.7e-10   1.2e-06       3     204 ..      54     289 ..      52     299 .. 0.67
   2 ?   -2.0   0.0      0.38   1.7e+03     256     271 ..     391     406 ..     365     420 .. 0.72

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 2.7e-10
  Pyr_redox_3   3 iGaGPaGlaaaielkkagl....edylilEkg.n.ignsiyrypkemt...fi....spsftsekleipdlnaiseetspafslkeeklsrkealeYl 87 
                  +G GPa la+ai+l++++      ++l lEk+ +   +  ++ p  +    fi    +   +  k+++++  ++ +  +  + l+++ +sr+e+ +Yl
   KHJ31700.1  54 VGFGPASLAIAIALEDLEDkkisPKVLFLEKNsEfTWHPGMQIPGAKMqisFIkdlaTLRNPRSKFTFINYLFTKQRLNQFINLSTHLPSRAEYEDYL 151
                  6777777777777766554222235677777732122333444443330112211113345677888888888887778888899************* PP

  Pyr_redox_3  88 revaksfel..piklfeeVesvkk..edeg.....fevet..ske...tyeAkkviiAtGefdkPnkl.nipGeeklvkhyskv.......kefhkya 163
                  r  a++fe   ++++++eV+sv    ++        +v++  sk+   t +A +v++A G   kP  + + +G + +v+h+s++       k+    +
   KHJ31700.1 152 RWCASHFEAknQVQYDTEVKSVRAgsQNADgkvtsWIVTSldSKGntvTKRACNVVLAVGG--KPMIPkELKGIK-NVTHSSQFipfikniKSHGSGR 246
                  ******987336**********9854332211221444433333355566899******98..777763699**8.8999998844442222333345 PP

  Pyr_redox_3 164 gqkvvViGgknSavDaAlelvrk..gaeVtvvtrgseiekees 204
                  + +++V+G++ Sa+++  +l++   ++++++++++++++ +++
   KHJ31700.1 247 KFRFAVVGAGQSAAEIFDHLWSVfpESKISMIIKTASLRPSDD 289
                  6689*****************988899******9998887765 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.38
  Pyr_redox_3 256 evkddvvla.tGykpdl 271
                    + d+++a tGy +++
   KHJ31700.1 391 I-EVDYIFAaTGYLCNA 406
                  3.344555559998886 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0     3e-09   1.3e-05       3     154 ..      54     211 ..      52     213 .. 0.68
   2 ?    2.9   0.0     0.022        97       1      18 [.     251     268 ..     251     280 .. 0.84
   3 ?   -3.2   0.0       1.6   7.2e+03     123     154 ..     362     401 ..     337     402 .. 0.49

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 3e-09
  NAD_binding_9   3 vGaGprGlavlerLlarakkkspleitlfdpsepgagrvwrtd.qseelllNvpasemslftddp........ptfaeWlrergaleeaeeldpdd 89 
                    vG Gp+ la++ +L + ++kk + ++   ++++      w++  q +   + ++      ++d           tf ++l +++ l++  +l + +
     KHJ31700.1  54 VGFGPASLAIAIALEDLEDKKISPKVLFLEKNSEF---TWHPGmQIPGAKMQISF-----IKDLAtlrnprskFTFINYLFTKQRLNQFINL-STH 140
                    9****************99999*********7776...45555244443333332.....22222333446689*******99985554454.679 PP

  NAD_binding_9  90 fvpRalyGrYlrdlfeellarlpegvtvevhraevvdleeradg....qavll...adgasl..aadaVvLAlG 154
                     ++Ra y +Ylr++++++ a+   +v+ +   ++v + +++adg    + +++   ++g+++  +a +VvLA+G
     KHJ31700.1 141 LPSRAEYEDYLRWCASHFEAKN--QVQYDTEVKSVRAGSQNADGkvtsW-IVTsldSKGNTVtkRACNVVLAVG 211
                    *****************99655..4555555555555555555533323.33334467766445999******9 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.022
  NAD_binding_9   1 aivGaGprGlavlerLla 18 
                    a+vGaG +++ ++++L +
     KHJ31700.1 251 AVVGAGQSAAEIFDHLWS 268
                    89*************976 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 1.6
  NAD_binding_9 123 evvdleeradgqavll.....adgas....laadaVvLAlG 154
                    ++++ +e++++  v+l     +d+ +    +++d+++ A+G
     KHJ31700.1 362 TIISANETQNRSNVILtlcdsRDN-NirecIEVDYIFAATG 401
                    455555555443222212222111.1233357777777776 PP

>> FMO-like  Flavin-binding monooxygenase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   3.4e-06     0.015      85     199 ..     146     263 ..     133     305 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 3.4e-06
    FMO-like  85 klleylklfakefdllkyiqfkttvcsvkkrpdfsts..GqwevvtekegkkesavfdavmvctGhhvnphlplesfpGiekfk..Gqyf.hsrdykep 178
                 +  +yl+  a +f+    +q+ t v sv+  ++ +      w +vt  + k ++    a  v      +p +p+e + Gi++     q++   ++ k+ 
  KHJ31700.1 146 EYEDYLRWCASHFEAKNQVQYDTEVKSVRAGSQNADGkvTSW-IVTSLDSKGNTVTKRACNVVLAVGGKPMIPKE-LKGIKNVThsSQFIpFIKNIKSH 242
                 5679************************99887765411456.88999***999999999999999999****87.67887654113433357889999 PP

    FMO-like 179 evfkgkrvlviGlGnsggdia 199
                    +  r  v+G G s+++i 
  KHJ31700.1 243 GSGRKFRFAVVGAGQSAAEIF 263
                 9999999*********99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.37
# Mc/sec: 3880.93
//
Query:       KHJ31701.1  [L=4850]
Description: putative nonribosomal siderophore peptide synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   7.8e-217  719.9   0.0    6.3e-79  265.5   0.0    3.2  3  AMP-binding     AMP-binding enzyme
   1.4e-148  495.4  25.0    2.6e-34  118.7   0.3    7.8  7  Condensation    Condensation domain
    1.9e-47  159.4   8.5      2e-11   44.1   0.2    6.8  6  PP-binding      Phosphopantetheine attachment site
    3.8e-10   40.6   0.0     0.0027   18.7   0.0    3.6  3  AMP-binding_C   AMP-binding enzyme C-terminal domain
  ------ inclusion threshold ------
      0.047   13.5   0.5       0.16   11.7   0.0    2.1  3  WES_acyltransf  Wax ester synthase-like Acyl-CoA acyltransfer


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.7   0.0   1.2e-67   4.3e-64       6     422 ..      28     430 ..      25     431 .. 0.83
   2 !  234.0   0.0   6.6e-73   2.4e-69       6     423 .]    1080    1468 ..    1075    1468 .. 0.84
   3 !  265.5   0.0   1.8e-82   6.3e-79       8     423 .]    2687    3082 ..    2682    3082 .. 0.87

  Alignments for each domain:
  == domain 1  score: 216.7 bits;  conditional E-value: 1.2e-67
                  HHSTTSEEEEE..CCSTEEEEHHHHHHHHHHHHHHHH.HT...TSSTT-E.EEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTES CS
  AMP-binding   6 aktpdkvalvd..sgegqtlTYreldervnrlAagLr.sl...Gvkkgdr.VaillpnspewvvallailkaGavvvplnptltaeelayiledseak 96 
                  +++pd+ a+ +  +++ + ++Y+e++++v  l   ++ +l    ++  ++ V +llp+sp +++++lail  G +  plnp+++ ++++++l+d+ea+
   KHJ31701.1  28 EEYPDRCAIDFtcNDRRKCYSYQEFQSCVALLVLRIQeALpfaSHGATQHiVPVLLPQSPALYITYLAILISGNAFCPLNPDTPIDRIKFVLNDVEAS 125
                  6799*****7799899999*******998866666554432113333333599********************************************* PP

                  EEEETCTCCCHHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHHHH CS
  AMP-binding  97 vliatvdselleklleaaakleavklvivldadellkeeelkeeeeseekaekpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslkle 194
                  +l+  + se  e+l  ++        +iv+d +        ++ e+ ++ +    +  ++kpddlay+iYTSG+TG PKGV+++h ++++++++++  
   KHJ31701.1 126 ILV--TTSES-EELVTWKNG----PRIIVVD-EF------IPSLEPIYKIQ--I-TL-RPKPDDLAYVIYTSGSTGAPKGVQITHLAASQSLQAHE-- 203
                  ***..54444.566666654....4677777.33......34444455443..2.33.789******************************99974.. PP

                  HCSCCTTT-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHHHHCCCHHCHHHHCCGTT-SEEEEES CS
  AMP-binding 195 trfklkeddvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvleallesgalkaakkakdlsslrlvllgg 292
                  ++  + + +++l+++  +++++l +e++++l + +t+v +++++ l+  +l   i++l++ ++ ++P+v+  l+e+  ++      + ++l ++l+ g
   KHJ31701.1 204 KY--IPPFKRFLQFAAPSFDVSL-FEIFFTLKRACTIVGCSRKDLLN--HLTTKINELNIDIVELTPSVVGSLIEK--RS------NVPGLNILLTIG 288
                  33..223479************8.*****************999966..6889**********************7..34......7899******** PP

                  S-EBHHHHHHHHHHHTC..EEEEEEEEGGGSSECEECHCTTTCTSTTS-BEE-TTEEEEEE.......-TTTSCBEETTSEEEEEEEETTS-SEBTT- CS
  AMP-binding 293 eplspellrffralfge..evlegYGlTEttgvvtvlpleedkkklgsvGkplpgvevkiv.......DeetgepvpdgeeGellvrgpgvmkgYlkk 381
                  epl   ++r+f     +   ++ +YG+TE+t ++t++p ++ ++k + +G pl  v   i+       D ++++ +p ge Gel++ gp++ +gY  +
   KHJ31701.1 289 EPLTIPIVREFGGSKAKrtLLYGLYGPTEATLHCTINPAMGVDSKFNNIGVPLDTVSTLIAspsscveDAAKLQILPIGELGELVLTGPQLGRGYIHR 386
                  ***********888777778**************99888888899999**8885555555444444449999************************** PP

                  HHHHHHHEEE.TCC.EEEEEEEEEEETTSEEEEEEECC.CEEEE CS
  AMP-binding 382 peataeafds.egr.wlrTGDlgrldedGyleivgRkk.dlikl 422
                  +e+ +++f++ egr ++rTGD ++  edG++ei gR+  d++k+
   KHJ31701.1 387 EELEKSVFIKfEGRdYYRTGDRAKQLEDGSIEIYGRINeDQVKV 430
                  *********765566*********************96367776 PP

  == domain 2  score: 234.0 bits;  conditional E-value: 6.6e-73
                   HHSTTSEEEEE.......CCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHT CS
  AMP-binding    6 aktpdkvalvd.......sgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledse 94  
                    + p+++a+ +       ++  q l+Y+el+ r+n++A++L +lG+ +++ + i+l++s+e++  +la+ k+Ga+ +p+ p+ + e+l+y+l++s+
   KHJ31701.1 1080 IEDPNRPAICFahslckgEHNLQDLSYSELNIRANKIAHYLVQLGILPDQLICICLDKSIELYTCILAVTKVGAAWIPVMPDIPLERLKYVLKQSQ 1175
                   56799999988999999988899************************************************************************* PP

                   ESEEEETCTCCCHHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHH CS
  AMP-binding   95 akvliatvdselleklleaaakleavklvivldadellkeeelkeeeeseekaekpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvas 190 
                     ++i  +  +l    +++     ++ +vi++d+        +++++ s+++      + +++ d+lay i+TSG+TG+PKGV +++rn+++ +++
   KHJ31701.1 1176 TPLVI--TCVDL----NSKF--IISSVKVILVDQ--------FDFSSFSSKN-----IPLKASLDNLAYAIFTSGSTGEPKGVLITQRNILNHISA 1250
                   *****..43333....1111..112223444553........3333333322.....2335799*****************************999 PP

                   HH.HHHCSCCTTT-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHHHHCCCHHCHHHHCCGTT- CS
  AMP-binding  191 lk.letrfklkeddvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvleallesgalkaakkakdlssl 285 
                   l+ l++   ++++ ++l+  +  +++++ ++++++   G++++ ++kd  +++  +  +i++lk+t++ ++P+v+  + ++          + + +
   KHJ31701.1 1251 LEsLYP---ATKKVRYLQSCSHTFDVSV-ADIFFTWRIGGCLCSAKKDVLFQDFDF--AIHTLKITHLSLTPTVAALINSK----------KVPCV 1330
                   865433...34566*************8.********************9553334..8999*************999776..........45569 PP

                   SEEEEESS-EBHHHHHHHHHHHTCEEEEEEEEGGGSSECEECHCTTTCTSTTS-BEE-TTEEEEEE..-TTTSCBEETTSEEEEEEEETTS-SEBT CS
  AMP-binding  286 rlvllggeplspellrffralfgeevlegYGlTEttgvvtvlpleedkkklgsvGkplpgvevkiv..DeetgepvpdgeeGellvrgpgvmkgYl 379 
                   ++++l+ge+l++++   +  ++   ++ gYG++E t +++  pl+  + k g +G  l  + + ++   + + +pvp+g  Gel+++g +v++gY 
   KHJ31701.1 1331 EFLILAGEALPSKVYSSWVGRG---LWVGYGPSEVTNILSARPLNFGNYKYGGIGYLLKTTSAFVLsaGD-NFNPVPRGGIGELCFGGSQVFRGYM 1422
                   ***************9999995...89************87555555567899*************7533.479********************** PP

                   T-HHHHHHHEEE..T.CCEEEEEEEEEEETTSEEEEEEECCCEEEET CS
  AMP-binding  380 kkpeataeafds..e.grwlrTGDlgrldedGyleivgRkkdliklr 423 
                   +k  ++  +f+   e gr +r+GD grl +dG+le++gR +d++k+r
   KHJ31701.1 1423 NKAHEQG-KFIVhrEfGRIYRSGDYGRLLPDGSLEFLGRNDDQVKIR 1468
                   *955555.5554366899***************************96 PP

  == domain 3  score: 265.5 bits;  conditional E-value: 1.8e-82
                   STTSEEEEE.......CCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTES CS
  AMP-binding    8 tpdkvalvd.......sgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseak 96  
                   +p+k a+ +       + + + +TY+el++ +n++A++L+++G+++gd +ai+ +++pe ++a+++i+k+G+++v l+ +++ ++l++ileds+ak
   KHJ31701.1 2687 HPKKAAFEFatsigadNFQSKIWTYEELNQISNKVANYLLKIGIEPGDPIAICFDKCPEATFAIIGIMKIGGICVALDQNSPVDRLKFILEDSGAK 2782
                   6777777667777777788999************************************************************************** PP

                   EEEETCTCCCHHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHH CS
  AMP-binding   97 vliatvdselleklleaaakleavklvivldadellkeeelkeeeeseekaekpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslk 192 
                    l+  +  + l+kl +  ++      v+ ld d ++ +    +e   +     p  ++ + p+d+ yiiYTSGTTG PKG+ ++h+nlv+++++++
   KHJ31701.1 2783 KLL--TMGKPLKKLTRFFSN-----FVLTLDLDVMSIY---SQE---Q-----PILSRLIMPSDISYIIYTSGTTGIPKGCLITHENLVQFMRAFS 2860
                   ***..877777777777764.....6777776555443...222...2.....223445799********************************97 PP

                   ..HHHCSCCTTT-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHHHHCCCHHCHHHHCCGTT.- CS
  AMP-binding  193 ..letrfklkeddvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvleallesgalkaakkakdlss.l 285 
                     ++ ++  ++++++l+++++++++++ +e +++ + G +vv +p+d     + + + i++++vt+i ++P++++ +  +          d +s  
   KHJ31701.1 2861 rnFDGHW--NDESKFLQFASYHFDVSI-MEQFWSWSIGIRVVSAPRDLI--IEDINGIIQAFGVTHIDLTPSLARLIRPE----------DVPSlC 2941
                   5544444..4689*************7.***************998866..445789******************99554..........777844 PP

                   SEE.EEESS-EBHHHHHHHHHHHTCEEEEEEEEGGGSSECEECHCTTTCTSTTS-BEE-TTEEEEEE-TTTSCBEETTSEEEEEEEETTS-SEBTT CS
  AMP-binding  286 rlv.llggeplspellrffralfgeevlegYGlTEttgvvtvlpleedkkklgsvGkplpgvevkivDeetgepvpdgeeGellvrgpgvmkgYlk 380 
                   + + ++gge l +e+l+ + +   + +++gYG+TE+++ +t++p+   + k+  +G+++ +v   ++   t+ pv +g  Gel+v+g+ + kgYl+
   KHJ31701.1 2942 HGCfITGGEELKQEILDTWGKF-SC-IYNGYGPTEASIGCTMNPRVSYNGKPANIGTAFTNVGTFVLKLGTELPVLRGGIGELCVSGKLISKGYLN 3035
                   444257**********999987.57.9*************98777888888999***************9999999******************** PP

                   -HHHHHHHEEE....TCCEEEEEEEEEEETTSEEEEEEECCCEEEET CS
  AMP-binding  381 kpeataeafds....egrwlrTGDlgrldedGyleivgRkkdliklr 423 
                   +p++tae+f      +++ +rTGDl+r+ +d ++ ++gR++ ++klr
   KHJ31701.1 3036 HPKLTAEKFPIlqsfNEKVYRTGDLVRMLHDESFIFIGRADSQVKLR 3082
                   *********637655345**********99***************96 PP

>> Condensation  Condensation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.7   0.3   7.3e-38   2.6e-34       3     436 ..     637    1035 ..     635    1045 .. 0.80
   2 !   91.5   0.9   1.3e-29   4.6e-26       1     360 [.    1707    2026 ..    1707    2089 .. 0.81
   3 !   74.3   0.0   2.1e-24   7.7e-21       5     442 ..    2250    2648 ..    2246    2658 .. 0.84
   4 !   28.4   0.0   1.8e-10   6.5e-07       4      88 ..    3316    3399 ..    3313    3428 .. 0.85
   5 !   21.8   0.4   1.8e-08   6.4e-05     194     436 ..    3472    3703 ..    3460    3711 .. 0.79
   6 !   98.2   0.0   1.2e-31   4.3e-28       3     441 ..    3848    4265 ..    3846    4267 .. 0.81
   7 !   73.9   0.5   2.8e-24     1e-20      22     326 ..    4435    4718 ..    4416    4766 .. 0.81

  Alignments for each domain:
  == domain 1  score: 118.7 bits;  conditional E-value: 7.3e-38
                    EEEEXXCCHHHHHHHHHHSSSSSTTEEEEEEEEES---HHHHHHHHHHHHHH-SSCCEEEEE...TTEEEEEE-...TT-----EEEE-T..TSS CS
  Condensation    3 deyplspaQkrmwflekleeessaynmqavlklegeldlerlekalqelierhdaLRtvfle.eengepvQvil...eerevelevleisdlees 93  
                    ++ p +p Q  + +l+++e++++ y   + l++ g  d + l k +  l + +++LRt f e    +e+vQ+i+   ++++++l           
    KHJ31701.1  637 RIFPCTPQQ--IAMLSESERDPTLYCDWLELEFPGLNDYKYLIKLIHDLSHSNPILRTGFFEtAGSEEFVQFIRkkiPDSQFDL----------- 718 
                    567999***..***********************************************998856899*******4222333333........... PP

                    SHHHHHHHHHHHHHTC--SCCCS....-SEEEEEEESSTTEEEEEEEEECCT--TTTHHHHHHHHHHHHHHH.HTT-------S--.HHHHHHHH CS
  Condensation   94 eeeeaieefaqkdlqepfdLekg....pLfraalfkiaenrlllllsvHHiivDGvSlgillrdlaklYqql.ekgeelplpqktp.Ykdyaewe 182 
                         +++f       +fd++k+     ++r+++ +  +++l ll+ +HH + D++S+++ll dl +l ++  +++++  +        +  ew 
    KHJ31701.1  719 -----VKSFTY-----KFDVSKEnslkLPIRFQIQE-RSSSLGLLIHIHHALYDAWSIELLLDDLDSLLASKpLCKRSSFE----LiVNSALEW- 797 
                    .....233333.....24444432111467788777.788999***********************998432133333333....345577788. PP

                    HHHHCSHHHHHHHHHHHHHHH......S---BSS---S.S---S-EEEEEE.EE-S-HHHHHHHHSTSS-HHHHHHHHHHHHHHHHHT-SEEEEE CS
  Condensation  183 qqyleskdlekeeaYWseqlegelpvlqLpkdkarpak.rsfkadrlsikl.deeteeklrklakeqgvtlndvllaalgllLskytgqddivvg 275 
                    ++ +++k++  +++YW++ l+++ p +qLp+ +++p+  ++++   ++ ++  +++e++ r+l      + +++++aal+l+Ls y g++di +g
    KHJ31701.1  798 EN-YTKKNWL-AKDYWKDHLANFDP-IQLPNFYTNPELiSRLSSYCIQTSIaTSDVEAASRRL----FSSSQSIFQAALSLILSSYLGNSDICFG 885 
                    44.4555454.679*******9655.******5555441445544444444344455555555....556689********************** PP

                    EEEESSTTCSTCHHC--SS-EEEEEEEEE--TT-BHHHHHHHHHHHHHHHHCCTTS-HHHHHHCSS.SS-SSSS-S-SEEEEESSS-HHCCCEEE CS
  Condensation  276 teisgReseikdiermvGlFvntlPlridvkeaktfselikrvkedllkaephqgypleeLvkdlelqrkesrspLfdpvfsfenylgqeseeee 370 
                    +++sgR+ +i++ie+++G  + tlP+ridv+++ ++ el++++    +k +++ ++ l +++  + lq    r  Lfd+ ++ +        +  
    KHJ31701.1  886 SVFSGRTLSIDGIENIIGPCLATLPIRIDVNASSSLHELVQQLNSISRKHLEYVQTSLRNIKIASGLQS---RGTLFDTLMVWQQ------TSHP 971 
                    *************************************************************88888776...578********66......4555 PP

                    CCCCSEEECEE...E.....SSEEEEEEETTSSEEEEEEEETTTS-HHHHHHHHHHHHHHHHHHHH CS
  Condensation  371 sqlselklsvssveaeeeskydlsleasetngkltikieYntslFdeetierflerlkelleqvie 436 
                    +++ + ++s   ++ e+ +++ l le+ ++ g++++++ Y+++l  +++i+ fl ++++l ++++e
    KHJ31701.1  972 HDFLRKNVS--LINTESFTEFNLVLEIIPHVGNIEFRVTYQEQLIPKSQIKIFLLQIEQLTKKILE 1035
                    555555555..5567899******************************************999987 PP

  == domain 2  score: 91.5 bits;  conditional E-value: 1.3e-29
                    EEEEEEXXCCHHHHHHHHHHSSSSSTTEEEEEEEEES---HHHHHHHHHHHHHH-SSCCEEEEE..TTEEEEEE-TT-----EEEE-T..TSSSH CS
  Condensation    1 vqdeyplspaQkrmwflekleeessaynmqavlklegeldlerlekalqelierhdaLRtvfleeengepvQvileerevelevleisdleesee 95  
                    vqd++p +++Q+ m+ ++ l+  s+ y  q++++++g++  + lek +qe+++rh +LRt f++   + p     ++  +++ + e+       +
    KHJ31701.1 1707 VQDILPCTSLQEAMLSAAALS--SETYQNQVIFEISGSI--SKLEKCWQEIVRRHQILRTCFKKT--EWP-----KHLYIQVVFAEFD-----LQ 1785
                    58999******9999999998..999***********97..68*******************653..211.....2333333222222.....11 PP

                    HHHHHHHHHHHHTC--SCCCS-SEEEEEEESSTTEEEEEEEEECCT--TTTHHHHHHHHHHHHHHHHTT-------S--HHHHHHHHHHHHCSHH CS
  Condensation   96 eeaieefaqkdlqepfdLekgpLfraalfkiaenrlllllsvHHiivDGvSlgillrdlaklYqqlekgeelplpqktpYkdyaeweqqyleskd 190 
                      +i ++ +k   + +d +++p+    ++  ++    l+ls+HH + D+  ++il  +++klY      ++l++ +++ ++ + ++    +es d
    KHJ31701.1 1786 FGTITQLSKK---KLLDGASKPPYSLDILH-TDGTKKLVLSMHHALYDAEAMSILYDEIQKLY----YDRPLES-PVS-FSHFLQA----QESID 1866
                    2346677774...78999999********9.********************************....8888777.777.9999999....78889 PP

                    HHHHHHHHHHHHH......S---B..SS---SS---S-EEEEEEEE-S-HHHHHHHHSTSS-HHHHHHHHHHHHHHHHHT-SEEEEEEEEESSTT CS
  Condensation  191 lekeeaYWseqlegelpvlqLpkd..karpakrsfkadrlsikldeeteeklrklakeqgvtlndvllaalgllLskytgqddivvgteisgRes 283 
                    +e++  +W+++le+      +pk   + +++ +++  ++ si+  +   + ++k + e++++l +vl+++++ +L +  +++d+ +g ++ gR  
    KHJ31701.1 1867 QESADFFWAKVLEK----CIFPKFehNSKTQYSKLTPQTHSIST-SYSLKWIEKKCMEHETSLLSVLMTVWACILAERLQETDVCFGNVVCGRSI 1956
                    999**********8....56888753455555556666666666.667789******************************************** PP

                    CSTCHHC--SS-EEEEEEEEE--TT-BHHHHHHHHHHHHHHHHCCTTS-HHHHHHCSS.SS-SSSS-S-SEEEEESS CS
  Condensation  284 eikdiermvGlFvntlPlridvkeaktfselikrvkedllkaephqgypleeLvkdlelqrkesrspLfdpvfsfen 360 
                    +i +ier v    nt+P r++  ++ +  e+++  ++   +++p q + l +++++ +  +      +fd+ + ++ 
    KHJ31701.1 1957 PIPGIERLVAPCFNTVPSRLKNIQDLSYIEAFRIFQKLHAETLPFQFTSLRRIQSKFK--QH-----IFDTTLILQK 2026
                    *********************9888888899999999999999999888888866665..32.....6787777766 PP

  == domain 3  score: 74.3 bits;  conditional E-value: 2.1e-24
                    EEXXCCHHHHHHHHHHSSSSSTTEEEEEEEEES---HHHHHHHHHHHHHH-SSCCEEEEE..TTEEEEEE-TT-----EEEE-T..TSSSHHHHH CS
  Condensation    5 yplspaQkrmwflekleeessaynmqavlklegeldlerlekalqelierhdaLRtvfleeengepvQvileerevelevleisdleeseeeeai 99  
                     p ++ Q+++   + ++++ + y+   vl+l+    ++ l++a++   +rh+++Rt ++  e+ ++   + ++r++ l  +e+   ++ +     
    KHJ31701.1 2250 RPCTSFQQGIIARS-IQTDGNEYFNLRVLELSNDTSISKLKDAWNIACQRHEIFRTGLVSTEDVNFPFAMVTYRNFALPWIEVD--KKAN---LK 2338
                    58899999987665.5557777777789*******************************998988888889*******999999..3333...22 PP

                    HHHHHHHHTC--SCCCS-SEEEEEEESSTTEEEEEEEEECCT--TTTHHHHHHHHHHHHHHHHTT-------S--HHHHHHHHHHHHCSHHHHHH CS
  Condensation  100 eefaqkdlqepfdLekgpLfraalfkiaenrlllllsvHHiivDGvSlgillrdlaklYqqlekgeelplpqktpYkdyaeweqqyleskdleke 194 
                     +++        +L+ gp    + +++ e+++ + +s HH + D+ S++ l+ d a+ Y +le  + ++        + + +    + +++le +
    KHJ31701.1 2339 LKLID-------KLTHGPWG-LH-VQHLEDKVEIKFSAHHALYDAKSIEMLFLDVASSYRSLEIINRPSINILI---SAIIS----QSQENLEAK 2417
                    34444.......36666644.43.355689*****************************666655554443333...23333....46678999* PP

                    HHHHHHHHH......S---BSS---SS---S-EEEEEEEE-S-HHHHHHHHSTSS-HHHHHHHHHHHHHHHHHT-SEEEEEEEEESSTT.CSTCH CS
  Condensation  195 eaYWseqlegelpvlqLpkdkarpakrsfkadrlsikldeeteeklrklakeqgvtlndvllaalgllLskytgqddivvgteisgRes.eikdi 288 
                    +++W    ++   ++ +p+  ++ + ++++ +++  k++e  +++l+  +++++vt++   +aa++ lL  y g+  + +g++ sgR   e  d 
    KHJ31701.1 2418 KTFWMRDENK-IMMNRFPDL-NPIKINDTR-SQTCTKVSEFKASALEFRCRQNSVTMQCAAQAAWARLLAAYIGEPTTTFGITLSGRSIhE--DA 2507
                    *****99997.77788****.888888888.78889999************************************************9845..** PP

                    HC--SS-EEEEEEEEE--TT-BHHHHHHHHHHHHHHHHCCTTS-HHHHHHCSS.SS-SSSS-S-SEEEEESSS-HHCCCEEECCCCSEEECEE.. CS
  Condensation  289 ermvGlFvntlPlridvkeaktfselikrvkedllkaephqgypleeLvkdlelqrkesrspLfdpvfsfenylgqeseeeesqlselklsvssv 383 
                    +++    + tlP+  ++  + t  el+ r+++  l++++hq +pl  + k ++ ++     ++fd+ +++  ++ ++s  + + + + ++s    
    KHJ31701.1 2508 DKIPFPSTVTLPVSCNI--SGTNKELLARTMDFNLHVYRHQFTPLSHILKWSDYPNG----KIFDTLITYRKLPENDSRLQIPWKVTREYS---- 2592
                    ***87777777777777..56669**************************9999998....7********998888888888888777777.... PP

                    .E.....SSEEEEEEE.TTSSEEEEEEEETTTS-HHHHHHHHHHHHHHHHHHHHSTTSBC CS
  Condensation  384 eaeeeskydlslease.tngkltikieYntslFdeetierflerlkelleqviehpeqkl 442 
                          +y lsl +    n++l++ ++++ +    e+ + +l +++ ll +v+++p++ +
    KHJ31701.1 2593 ----SVDYVLSLDLLSlGNDRLELYLNFKLEIIPPEQASIILHQYEALLYDVLSNPKNAC 2648
                    ....45699****9998999************************************9876 PP

  == domain 4  score: 28.4 bits;  conditional E-value: 1.8e-10
                    EEEXXCCHHHHHHHHHHSSSSSTTEEEEEEEEES---HHHHHHHHHHHHHH-SSCCEEEEE..TTEEEEEE-TT-----.EEEE-T CS
  Condensation    4 eyplspaQkrmwflekleeessaynmqavlklegeldlerlekalqelierhdaLRtvfleeengepvQvileerevel.evleis 88  
                    + p +p+Q++m  ++ le +  +y+ +++++l+ ++d + l  a++ +i + ++LR+ f+   ++ + Q +  ++++++ + ++  
    KHJ31701.1 3316 ISPCTPIQEGMI-FKYLESKDAIYFNKFIFRLNNNVDTQKLLAAWNRVICHLEVLRIKFVAT-DDGFCQAVMRTKTISWeHGIDYD 3399
                    6799******95.688999****************************************876.999******99999995556655 PP

  == domain 5  score: 21.8 bits;  conditional E-value: 1.8e-08
                    HHHHHHHHHH......S---BSS---SS---S-EEEEEEEE-S-HHHHHHHHSTSS-HHHHHHHHHHHHHHHHHT-SEEEEEEEEESSTTCSTCH CS
  Condensation  194 eeaYWseqlegelpvlqLpkdkarpakrsfkadrlsikldeeteeklrklakeqgvtlndvllaalgllLskytgqddivvgteisgReseikdi 288 
                    ++++Ws  +++ lp + L  d  ++ ++s++ ++ +i+l     + +++l ++ gv  + +  a++ ++L+ +  + ++ +g+++sg    ++d+
    KHJ31701.1 3472 AKEFWSSHFRE-LPATYLSVD--PLYSKSTE-SSSVINL-----KGFETLRRSLGVAPQAIVEACWIAVLQ-IHLSLKFTMGIVVSGCMMNMDDV 3556
                    68999999997.665556655..33333333.5555666.....778888888999999********9997.77888999**********99*** PP

                    HC--SS-EEEEEEEEE--TT-BHHHHHHHHHHHHHHHHCCTTS-HHHHHHCSS.SS....-SSSS-S-SEEEEESSS-HHCCCEEECCCCSEEEC CS
  Condensation  289 ermvGlFvntlPlridvkeaktfselikrvkedllkaephqgypleeLvkdlelqr....kesrspLfdpvfsfenylgqeseeeesqlselkls 379 
                    + +vG   ntlP+ i ++ + t+ e+i   +e  +k+++ q +  ++++k   +++    k ++ ++f+ +f+f         e++s++s  +  
    KHJ31701.1 3557 DLVVGPLFNTLPFNISLRTQATLKEVILFCQEFNMKMLDFQFTSTKDIQKWIHEKHgkhgKHDKYEIFQNIFNF-------IRENTSMKSISNNV 3644
                    ************************************************99887766111133445566666666.......45666666666666 PP

                    EE...E.....SSEEEEEEE..TTSSEEEEEEEETTTS-HHHHHHHHHHHHHHHHHHHH CS
  Condensation  380 vssveaeeeskydlslease..tngkltikieYntslFdeetierflerlkelleqvie 436 
                     + +  ++  +y l+lea+   +n++l++++  +++   +e+ + +l+++++ ++q+ie
    KHJ31701.1 3645 WDLIDTKSHLDYPLALEARLssDNSQLSLTVFKSSQILINEDAKSLLKKMEHYIQQTIE 3703
                    66777889999******999778999999987777777788888888888888888775 PP

  == domain 6  score: 98.2 bits;  conditional E-value: 1.2e-31
                    EEEEXXCCHHHHHHHHHHSSSSSTTEEEEEEEEES---HHHHHHHHHHHHHH-SSCCEEEEE...TT...EEEEEE-TT-----EEEE-T..TSS CS
  Condensation    3 deyplspaQkrmwflekleeessaynmqavlklegeldlerlekalqelierhdaLRtvfle.eeng...epvQvileerevelevleisdlees 93  
                    +++p +p+Q+ m + e+++ + + y+   ++++ +++dl  l+++++ ++e  ++LRt+f e ++ +   +  Qvi+++++ ++e+  +s  +e 
    KHJ31701.1 3848 TILPATPLQQSM-VNEMISSGFKRYFNIDCFRIAPSVDLIKLKNSINRVVEISPILRTIFYEvDDPKipvRYAQVIQKYSKNSIEIDSVSLKDEI 3941
                    67899****666.55666666677777779******************************88543341114468888888877777777766788 PP

                    SHHHHHHHHHHHHHTC--SCCCS-SEEEEEEESSTTEEEEEEEEECCT--TTTHHHHHHHHHHHHHHHHTT-------S--HHHHHHHHHHHHCS CS
  Condensation   94 eeeeaieefaqkdlqepfdLekgpLfraalfkiaenrlllllsvHHiivDGvSlgillrdlaklYqqlekgeelplpqktpYkdyaeweqqyles 188 
                      e+ ++ + q+ +    + +k   fr+ +++   +  +l++++ H + DG+Sl+++ +d+ k+Y       +   ++ +++k y e+      s
    KHJ31701.1 3942 LLENYLKDYTQEVIIGAKRTKKLLYFRFLIID---DAKYLIIAISHALYDGISLQLFHEDIKKAY----Y--S-YILPRPNFKPYLEK----VFS 4022
                    88888888888744444444555666766666...8999**************************....3..3.33444557777788....677 PP

                    HHHHHHHHHHHHHHH......S---BSS---SS---S-EEEEEE...EE-S-HHHHHHHHSTSS-HHHHHHHHHHHHHHHHHT-SEEEEEEEEES CS
  Condensation  189 kdlekeeaYWseqlegelpvlqLpkdkarpakrsfkadrlsikl...deeteeklrklakeqgvtlndvllaalgllLskytgqddivvgteisg 280 
                       e+++ +W+ +l+    ++ +p++ + + k+s     +++ l   ++++  +++ +++++g+t++++ +++++l+L  + +q d+++ t+ s 
    KHJ31701.1 4023 SVTENAKLFWRARLAD-ISENRIPQRDILSVKESK----DQFLLhrkSSSLLPEVKAFCRSSGITIQTLGQTCWALALGHLMKQLDVAFATTLSC 4112
                    77899**********8.777899999444444333....3444444689999******************************************* PP

                    STTCSTCHHC--SS-EEEEEEEEE--TT-BHHHHHHHHHHHHHHHHCCTTS-HHHHHHCSS.SS-S....SSS-S-SEEEEESSS-HHCCCEEEC CS
  Condensation  281 ReseikdiermvGlFvntlPlridvkeaktfselikrvkedllkaephqgypleeLvkdlelqrke....srspLfdpvfsfenylgqeseeees 371 
                    R se  + +++     nt+ lr+ +  + ++ +++k ++++   ++++q++pl+  + +    rke    s+  Lfd+ f ++   g + ++ee+
    KHJ31701.1 4113 RDSE--EANEVNFPLMNTVILRSII--HGNLGDMLKYMQDNSDATRQYQYFPLNMAQAYALSSRKEcsklSKISLFDSLFIYQ---GRDLSTEEN 4200
                    ****..99999999**********9..6679**********************998877666665422235667999999995...589999999 PP

                    CCCSEEECEE...E.....SSEEEEEEE.TTSSEEEEEEEETTTS-HHHHHHHHHHHHHHHHHHHHSTTSB CS
  Condensation  372 qlselklsvssveaeeeskydlslease.tngkltikieYntslFdeetierflerlkelleqviehpeqk 441 
                    +l e   +++        ++ + +e+ + +++ ++ + + ++s  +  +  ++le l+ +le++i++p+++
    KHJ31701.1 4201 SLYERVCGINE------VEFPVCIELCIkDDKYISWTAACKSSFISYTETAKILEDLESILECIIKKPNSP 4265
                    99999999665......55********98888899999889988899999******************987 PP

  == domain 7  score: 73.9 bits;  conditional E-value: 2.8e-24
                    SSSSTTEEEEEEEEES---HHHHHHHHHHHHHH-SSCCEEEEE..TTEEEEEE-TT-----EEEE-T..TSSSHHHHHHHHHHHHHTC--SCCCS CS
  Condensation   22 eessaynmqavlklegeldlerlekalqelierhdaLRtvfleeengepvQvileerevelevleisdleeseeeeaieefaqkdlqepfdLekg 116 
                    ++  +++ +++  l  +l++  +e+a+ +l+ rhd+LRt fl +   +++Qv+ ++   ++ + + +d+        ie+ +   ++ +++L   
    KHJ31701.1 4435 THGAIFFASFSHILPDQLNKYSIESAWSKLLARHDILRTGFLDD-GAKIFQVVYQNPFNQVIYCHEEDV--------IETRK---MKTDLKL--- 4514
                    57788999999999***************************755.********9887777644444422........33222...3445555... PP

                    -SEEEEEEESSTTEEEEEEEEECCT--TTTHHHHHHHHHHHHHHHHTT-------S--HHHHHHHHHHHHCSHHHHHHHHHHHHHHH......S- CS
  Condensation  117 pLfraalfkiaenrlllllsvHHiivDGvSlgillrdlaklYqqlekgeelplpqktpYkdyaeweqqyleskdlekeeaYWseqlegelpvlqL 211 
                    p++   + k+++n+  l+l +HH + DGvS++i+lr+l +lY     g e++lp ++ +k+++e+  +++ s+ l + ++ W+++l ++++   L
    KHJ31701.1 4515 PPLNLIVEKLSNNKIQLILMIHHALYDGVSIKIMLRELLNLY----YGTETELPMMN-FKKFVEQ--SFSSSQ-LSNMQEKWKDYLGSTEK---L 4598
                    778888899999******************************....****9998888.*****99..655555.7777778******9444...8 PP

                    --BSS---SS---S-EEEEEEEE-S-HHHHHHHHSTSS-HHHHHHHHHHHH....HHHHHT....-SEEEEEEEEESSTT..CSTCHHC--SS-E CS
  Condensation  212 pkdkarpakrsfkadrlsikldeeteeklrklakeqgvtlndvllaalgll....Lskytg....qddivvgteisgRes..eikdiermvGlFv 296 
                     +d   +   ++ +++++i+++++    ++ +a+++g ++  ++la+l  l    L+k+ +     + + +g+++++R    e  d+++     +
    KHJ31701.1 4599 IPD---SLGATVIEQKTKIRISSKKIPDFKGIARKTGSSVDALFLAILVKLesqrLQKILKigptMSSLTIGLFVANRGPfgE--DLSQLPAPTL 4688
                    888...67788888999*****************************9965444446666542222466789999999999545..9999999999 PP

                    EEEEEEEE--TT-BHHHHHHHHHHHHHHHH CS
  Condensation  297 ntlPlridvkeaktfselikrvkedllkae 326 
                    n+lP+   +  +k++  l  ++++d++++ 
    KHJ31701.1 4689 NILPIQAIQPLDKSLETLAFELQNDIHNIT 4718
                    999999888888899999999999988874 PP

>> PP-binding  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.1   0.00013      0.48       6      51 ..     539     583 ..     537     590 .. 0.81
   2 !   44.1   0.2   5.6e-15     2e-11       2      65 ..    1602    1665 ..    1601    1667 .. 0.96
   3 !   31.0   0.0   6.8e-11   2.4e-07       3      67 .]    2140    2203 ..    2139    2203 .. 0.96
   4 !   20.6   0.0   1.2e-07   0.00041       3      66 ..    3206    3269 ..    3205    3270 .. 0.89
   5 !   29.8   0.1   1.6e-10   5.9e-07       3      63 ..    3748    3807 ..    3747    3808 .. 0.92
   6 !   21.9   0.0   4.7e-08   0.00017       3      65 ..    4312    4373 ..    4311    4375 .. 0.94

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00013
  PP-binding   6 lvaevlgvpleeidpdtdlfdlGlDSllavellaaleeefgveipl 51 
                 l++++l  +l ++ +d  l++ GlDSl+a+++ ++l++  g++++ 
  KHJ31701.1 539 LIKTILFDSLGSFPLDIRLSSVGLDSLNAIKISSKLRAS-GFAVST 583
                 5666666777788899********************986.666665 PP

  == domain 2  score: 44.1 bits;  conditional E-value: 5.6e-15
  PP-binding    2 klrelvaevlgvpleeidpdtdlfdlGlDSllavellaaleeefgveiplsdlfehptlaelaa 65  
                  ++ ++va+v++ ++ eid+d ++f+lG+DS++a+ l   l+++f  +i++s+++ ++++ +la+
  KHJ31701.1 1602 EIAAAVAQVTNKSVLEIDADMSFFSLGFDSITAIHLSKILRKKFSYQITVSEILRFSSVIRLAE 1665
                  6899*******************************************************99997 PP

  == domain 3  score: 31.0 bits;  conditional E-value: 6.8e-11
  PP-binding    3 lrelvaevlgvpleeidpdtdlfdlGlDSllavellaaleeefgveiplsdlfehptlaelaayl 67  
                  +++++a+  +vp++ i  ++++f lG+DS++++ +++ ++++ g ++  +d+fe+pt+ el++++
  KHJ31701.1 2140 ICDVIAKFSDVPVDKIRHNDNFFHLGVDSINIALFVSHIKKK-GYDVLITDIFENPTVCELSNLI 2203
                  78999***********99************************.***************9999876 PP

  == domain 4  score: 20.6 bits;  conditional E-value: 1.2e-07
  PP-binding    3 lrelvaevlgvpleeidpdtdlfdlGlDSllavellaaleeefgveiplsdlfe.hptlaelaay 66  
                  +++ + +++gv+++ ++  t+++++GlDS++++++ + l++  g+e  +  +   +p++ +l+ +
  KHJ31701.1 3206 VLSKIGSAIGVEVSILSHKTNIYEYGLDSISMIKFCRDLQKS-GLENASLSIIRnNPSIDSLVTA 3269
                  77889999****999999***********************9.888888877766*****99976 PP

  == domain 5  score: 29.8 bits;  conditional E-value: 1.6e-10
  PP-binding    3 lrelvaevlgvpleeidpdtdlfdlGlDSllavellaaleeefgveiplsdlfehptlael 63  
                  +++ va + ++++ +id ++++++lGlDS+++++l ++l+++ g+ei++sd+   + ++++
  KHJ31701.1 3748 IKNEVAALANLNPGAIDESSSIYELGLDSIDVIKLFSRLKKR-GLEISVSDIIKSQMISRI 3807
                  78999*************************************.********9887776665 PP

  == domain 6  score: 21.9 bits;  conditional E-value: 4.7e-08
  PP-binding    3 lrelvaevlgvpleeidpdtdlfdlGlDSllavellaaleeefgveiplsdlfehptlaelaa 65  
                  +r ++ e+ gvp+ ei+ + +++ lGlDS+l+++l a l+   g++++ + ++  +t+ e+a+
  KHJ31701.1 4312 IRKALYEISGVPEREIGKNMTIYHLGLDSILVLKLPALLRSY-GIKLSITSILKGQTVTEMAK 4373
                  677788999********************************7.*****************997 PP

>> AMP-binding_C  AMP-binding enzyme C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0    0.0012       4.3       1      76 []     439     508 ..     439     508 .. 0.85
   2 !   18.7   0.0   7.5e-07    0.0027       7      76 .]    1483    1563 ..    1477    1563 .. 0.81
   3 !    9.3   0.0   0.00063       2.2      12      76 .]    3102    3168 ..    3093    3168 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0012
                    HHHHHHHSSTTEEEEEEE-----TTS---EEEEEE------HHHHHHHHHHHHT-TTTS-SEEEE-S---B-TTS- CS
  AMP-binding_C   1 evEsalvshpaVaeaaVvGvpdevkGealvafVvlkdgsealeeeLkahvrkelgpyavpkkvvfvdelpktrsGK 76 
                    e+E+++ +  +V+ +a+      ++G ++v  +v   + +   ee+++ + k l++   p+++++ +++p  +sGK
     KHJ31701.1 439 EIENIIYKYSGVKVVAAM----VIRGAIVVFSIVN--NMAIDSEEIMRTCSKWLPKSILPNEIILRNSFPYLASGK 508
                    8***********999977....5788777777776..422245***************************999998 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 7.5e-07
                     HSSTTEEEEE..EE-----TTS---EEEEEE---..---.........HHHHHHHHHHHHT-TTTS-SEEEE-S---B-TTS- CS
  AMP-binding_C    7 vshpaVaeaa..VvGvpdevkGealvafVvlkdg..sea.........leeeLkahvrkelgpyavpkkvvfvdelpktrsGK 76  
                     +s p++++++  V+  +++ + ++lv+f ++++   + +         + e+L++ + ++l+ y+ p++v+ v+ +p t sGK
     KHJ31701.1 1483 SSNPEISNCVtlVIEGQTQ-TDQRLVCFWTPNKYstQ-KleclkvdlaTVENLRKVLDSTLPNYMIPSAVIPVSFIPITISGK 1563
                     6788899999767744444.569********432322.24677888899*********************************9 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00063
                     EEEEEEE-----.TTS---EEEEEE---.---..HHHHHHHHHHHHT-TTTS-SEEEE-S---B-TTS- CS
  AMP-binding_C   12 VaeaaVvGvpde.vkGealvafVvlkdg.sea..leeeLkahvrkelgpyavpkkvvfvdelpktrsGK 76  
                     ++++ V   ++   + ++lv+f v     +++  l ++ ++ +++ l+ y+vp++++ v+ +p++++ K
     KHJ31701.1 3102 IDQVIVLILKHRaQNSNRLVVFFVT--SlVNPirLIAAMQSACKTWLPGYMVPSHFIPVKTMPLNTNNK 3168
                     5555555444443445777888776..322334699****************************99987 PP

>> WES_acyltransf  Wax ester synthase-like Acyl-CoA acyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.2       2.7   9.5e+03     131     141 ..     751     761 ..     747     765 .. 0.86
   2 ?   -4.4   0.1       3.6   1.3e+04     131     142 ..    1819    1830 ..    1814    1844 .. 0.80
   3 ?   11.7   0.0   4.5e-05      0.16     120     159 ..    4520    4559 ..    4512    4620 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 2.7
  WES_acyltransf 131 illkvHHAliD 141
                     +l+++HHAl D
      KHJ31701.1 751 LLIHIHHALYD 761
                     799******99 PP

  == domain 2  score: -4.4 bits;  conditional E-value: 3.6
  WES_acyltransf  131 illkvHHAliDG 142 
                      ++l +HHAl D 
      KHJ31701.1 1819 LVLSMHHALYDA 1830
                      5789*****995 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 4.5e-05
  WES_acyltransf  120 viEGleggriAillkvHHAliDGvgglkllarlldldpdd 159 
                      ++E l +++i ++l +HHAl DGv+   +l++ll+l    
      KHJ31701.1 4520 IVEKLSNNKIQLILMIHHALYDGVSIKIMLRELLNLYYGT 4559
                      689999**************************99975544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (4850 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.60u 0.32s 00:00:01.92 Elapsed: 00:00:00.51
# Mc/sec: 28741.97
//
Query:       KHJ31702.1  [L=1444]
Description: putative gyf domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-17   63.4   0.1    2.7e-17   62.1   0.1    1.8  1  GYF       GYF domain
  ------ inclusion threshold ------
      0.027   15.1   0.7        0.4   11.3   0.1    2.9  2  DUF4690   Small Novel Rich in Cartilage
       0.13   12.1   0.0       0.52   10.2   0.0    2.1  2  GYF_2     GYF domain 2


Domain annotation for each model (and alignments):
>> GYF  GYF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   0.1   4.6e-21   2.7e-17       1      45 []     722     766 ..     722     766 .. 0.99

  Alignments for each domain:
  == domain 1  score: 62.1 bits;  conditional E-value: 4.6e-21
         GYF   1 WeYkdpqgevqGPFsseeMqkWykagYFkdgllvrrvedsefysl 45 
                 W Y+dpq++vqGPFs+ eM++Wyka +F+++l v++ ed+ef++l
  KHJ31702.1 722 WLYLDPQAQVQGPFSGLEMHDWYKASFFTPNLSVKKLEDAEFEPL 766
                 *******************************************97 PP

>> DUF4690  Small Novel Rich in Cartilage
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   6.7e-05       0.4       7      64 ..     217     273 ..     212     277 .. 0.80
   2 ?    0.3   0.0      0.18   1.1e+03      34      65 ..    1074    1105 ..    1062    1117 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.7e-05
     DUF4690   7 aPtlwndpqelvsGegplesttkeresdltdlpastselepeDtthlerldeeegslG 64 
                  P + +++++ +s +g  +  t +r s + + p++t ++++ D t+ +  d+++  lG
  KHJ31702.1 217 RPNTRRQQANDPSNSGIASPNTASRFSRDDQSPFYTRKFDYKDNTDERS-DDNKLGLG 273
                 68888899999999999998888899999999*************9854.44434444 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.18
     DUF4690   34 dltdlpastselepeDtthlerldeeegslGP 65  
                  + + lp++t++ +  +tt++ +++++  s  P
  KHJ31702.1 1074 TISILPTPTFQKDHHNTTEILNFEKKPQSKTP 1105
                  5566799999999999*999999988766666 PP

>> GYF_2  GYF domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0         1     6e+03      23      43 ..     102     122 ..      95     122 .. 0.83
   2 ?   10.2   0.0   8.8e-05      0.52       1      46 [.     722     768 ..     722     770 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1
       GYF_2  23 asgeitpdtlVWreGmddWkp 43 
                 ++ ++t +++V r   d+W p
  KHJ31702.1 102 QQSRVTDESHVSRLFADGWAP 122
                 56789999**99999999987 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 8.8e-05
       GYF_2   1 Wyyadng.qqqGPfsleeLkelaasgeitpdtlVWreGmddWkpase 46 
                 W y d + q qGPfs  e+++++++   tp+  V +   +++ p+++
  KHJ31702.1 722 WLYLDPQaQVQGPFSGLEMHDWYKASFFTPNLSVKKLEDAEFEPLGQ 768
                 88999666**********************99999999999888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1444 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.83u 0.26s 00:00:01.08 Elapsed: 00:00:00.44
# Mc/sec: 9884.90
//
Query:       KHJ31703.1  [L=990]
Description: putative tpr domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.8e-07   28.5   0.3      0.011   15.4   0.0    3.4  3  TPR_11    TPR repeat
    0.00012   21.9   7.6      0.058   13.5   0.0    5.0  4  TPR_2     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.097   13.2   2.4         16    6.1   0.1    4.3  5  TPR_19    Tetratricopeptide repeat
       0.55   10.2   7.4        7.8    6.5   0.0    5.0  5  TPR_1     Tetratricopeptide repeat
        1.3   10.1   3.8          4    8.5   0.1    4.0  4  TPR_14    Tetratricopeptide repeat
        7.6    6.9   8.7       0.85   10.0   0.4    3.6  4  TPR_12    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0   0.00052       1.6       1      36 [.     629     664 ..     629     668 .. 0.94
   2 !   15.4   0.0   3.6e-06     0.011       9      39 ..     671     701 ..     669     703 .. 0.94
   3 ?   -0.0   0.1      0.24   7.3e+02      13      26 ..     750     763 ..     748     765 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00052
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGl 36 
                 G  y++ G +++A eaY  A +   +n++ ++ LG+
  KHJ31703.1 629 GEHYVKSGSLKKAREAYFLASNAHRQNPDTWSRLGD 664
                 6679*******************************7 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 3.6e-06
      TPR_11   9 kyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 ++e Ai a+++ + ld +na  y+nLG a++
  KHJ31703.1 671 NWESAIYAFQQSIMLDDTNAMSYSNLGSALL 701
                 69*************************9986 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.24
      TPR_11  13 AieaYkkAlkldPd 26 
                 A+ aYk+A +l  +
  KHJ31703.1 750 ALRAYKRAANLAHT 763
                 999*****998665 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.3    0.0045        14       1      24 [.     622     645 ..     622     645 .. 0.94
   2 !   13.5   0.0   1.9e-05     0.058       2      34 .]     657     689 ..     656     689 .. 0.94
   3 ?    0.7   0.3      0.26   7.7e+02      20      33 ..     750     763 ..     747     764 .. 0.83
   4 ?    1.3   0.3      0.16   4.7e+02      11      27 ..     877     893 ..     875     893 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0045
       TPR_2   1 aealynlGlayyklgdyeeAleaf 24 
                 a+a  +lG+ y k+g +++A+ea+
  KHJ31703.1 622 ARAQRALGEHYVKSGSLKKAREAY 645
                 678999****************99 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 1.9e-05
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                 + + +lG++ +k  ++e A+ af++++ ld +n
  KHJ31703.1 657 DTWSRLGDLDLKFENWESAIYAFQQSIMLDDTN 689
                 78***************************9886 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.26
       TPR_2  20 AleafekAleldPn 33 
                 Al+a+++A  l+ +
  KHJ31703.1 750 ALRAYKRAANLAHT 763
                 9*******999866 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.16
       TPR_2  11 yyklgdyeeAleafekA 27 
                 +++++dy +Ale+  kA
  KHJ31703.1 877 ALYQKDYTRALEFAVKA 893
                 6799*******988776 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0         6   1.8e+04      28      51 ..     242     267 ..     239     270 .. 0.70
   2 ?    1.2   0.0      0.18   5.2e+02       4      48 ..     518     554 ..     491     558 .. 0.72
   3 ?    6.1   0.1    0.0052        16      23      57 ..     619     654 ..     611     662 .. 0.78
   4 ?    1.8   0.0      0.12   3.5e+02       9      46 ..     643     677 ..     642     691 .. 0.83
   5 ?    1.0   0.0       0.2     6e+02       1      18 [.     877     894 ..     877     902 .. 0.89

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 6
      TPR_19  28 rllL..AeallalgqldeAealLdal 51 
                 ++lL  A+++  +g   +A ++L+ +
  KHJ31703.1 242 QYLLekAQIYTFQGFESKAVNALKMV 267
                 55555588888888888888888765 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.18
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealL 48 
                 +g + +Al++++++      n++a    A ++ +  q ++A++++
  KHJ31703.1 518 AGSFVSALNIFKRL------NLWAEV--ALCYHSVSQEAKARQVI 554
                 56777777777776......444444..66777777777777665 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.0052
      TPR_19  23 k.naearllLAeallalgqldeAealLdalpeedpd 57 
                 + +a+a+ +L e ++++g l++A+++   + ++ ++
  KHJ31703.1 619 NrYARAQRALGEHYVKSGSLKKAREAYFLASNAHRQ 654
                 4489999*****************987666666665 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.12
      TPR_19   9 eAlalleqalqedpknaearllLAeallalgqldeAea 46 
                 eA  l ++a     +n++ + +L ++ l+  +++ A+ 
  KHJ31703.1 643 EAYFLASNA---HRQNPDTWSRLGDLDLKFENWESAIY 677
                 677777888...889*******************9975 PP

  == domain 5  score: 1.0 bits;  conditional E-value: 0.2
      TPR_19   1 llaegdyaeAlalleqal 18 
                 +l+++dy++Al++  +a+
  KHJ31703.1 877 ALYQKDYTRALEFAVKAW 894
                 689*********988876 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.2     0.092   2.7e+02       2      24 ..     623     645 ..     622     648 .. 0.85
   2 ?    6.5   0.0    0.0026       7.8       2      34 .]     657     689 ..     656     689 .. 0.90
   3 ?   -1.5   0.0      0.87   2.6e+03       2      13 ..     691     702 ..     690     703 .. 0.80
   4 ?    0.5   0.1      0.21   6.2e+02      18      33 ..     748     763 ..     747     764 .. 0.80
   5 ?    0.6   0.2      0.19   5.7e+02      13      24 ..     879     890 ..     876     893 .. 0.67

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.092
                 HHHHHHHHHHHHTT-HHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyy 24 
                 +a   lG  y k g +++A e+y
  KHJ31703.1 623 RAQRALGEHYVKSGSLKKAREAY 645
                 666679999*************9 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0026
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 +++ +lG + +k ++++ A+ ++++ + l+ +n
  KHJ31703.1 657 DTWSRLGDLDLKFENWESAIYAFQQSIMLDDTN 689
                 7899999999999**************999776 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.87
                 HHHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfk 13 
                  ++ nlG a+++
  KHJ31703.1 691 MSYSNLGSALLS 702
                 579****99875 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.21
                 HHHHHHHHHHHHHSTT CS
       TPR_1  18 deAleyyekALelnPn 33 
                 + Al +y++A  l ++
  KHJ31703.1 748 KLALRAYKRAANLAHT 763
                 579*******887766 PP

  == domain 5  score: 0.6 bits;  conditional E-value: 0.19
                 HTT-HHHHHHHH CS
       TPR_1  13 klgkydeAleyy 24 
                 ++++y  Ale+ 
  KHJ31703.1 879 YQKDYTRALEFA 890
                 677777777765 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0         6   1.8e+04       5      25 ..     245     265 ..     243     267 .. 0.81
   2 ?   -1.3   0.0       1.9   5.5e+03       5      27 ..     509     531 ..     505     543 .. 0.84
   3 ?    8.5   0.1    0.0013         4       2      43 ..     623     664 ..     622     665 .. 0.87
   4 ?   -2.7   0.0       5.5   1.6e+04      19      31 ..     749     761 ..     747     768 .. 0.62

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 6
      TPR_14   5 lalaeallalGdpdeAiallr 25 
                 l+ a+++  +G   +A+++l+
  KHJ31703.1 245 LEKAQIYTFQGFESKAVNALK 265
                 677899999999999999987 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.9
      TPR_14   5 lalaeallalGdpdeAiallrra 27 
                  +la a + +G +  A+++++r+
  KHJ31703.1 509 TELAFAWASAGSFVSALNIFKRL 531
                 5788899999*******999986 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0013
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 +a++al+e +  +G +++A++++  a  ++ +++++w +l++
  KHJ31703.1 623 RAQRALGEHYVKSGSLKKAREAYFLASNAHRQNPDTWSRLGD 664
                 799******************998888888888888888876 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 5.5
      TPR_14  19 eAiallrralala 31 
                  A+++++ra  la
  KHJ31703.1 749 LALRAYKRAANLA 761
                 5778888875544 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.4   0.00028      0.85       3      74 ..     622     685 ..     620     688 .. 0.88
   2 ?    5.2   0.0    0.0089        27      49      74 ..     660     685 ..     657     703 .. 0.79
   3 ?   -4.0   0.3         6   1.8e+04      64      74 ..     750     760 ..     748     762 .. 0.53
   4 ?   -2.6   0.1       2.4     7e+03      57      67 ..     879     889 ..     873     893 .. 0.55

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00028
      TPR_12   3 atalnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74 
                 a+a++ l++ + + g + +A+e +  a +++r+   pd      t   Lg+l ++++++e A++++++++ +
  KHJ31703.1 622 ARAQRALGEHYVKSGSLKKAREAYFLASNAHRQN--PD------TWSRLGDLDLKFENWESAIYAFQQSIML 685
                 7888889999999999999999999999999877..77......599*********************9865 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0089
      TPR_12  49 rnLgrlyralgryeeAlelleealai 74 
                   Lg+l ++++++e A++++++++ +
  KHJ31703.1 660 SRLGDLDLKFENWESAIYAFQQSIML 685
                 56888888888888888888888754 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 6
      TPR_12  64 Alelleealai 74 
                 Al+++++a ++
  KHJ31703.1 750 ALRAYKRAANL 760
                 55555555443 PP

  == domain 4  score: -2.6 bits;  conditional E-value: 2.4
      TPR_12  57 algryeeAlel 67 
                 ++++y  Ale+
  KHJ31703.1 879 YQKDYTRALEF 889
                 44455555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (990 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       608  (0.0339115); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.73u 0.26s 00:00:00.99 Elapsed: 00:00:00.43
# Mc/sec: 6917.10
//
Query:       KHJ31704.1  [L=285]
Description: hypothetical protein EV44_g3138 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.03   13.6   0.1      0.043   13.1   0.1    1.2  1  ALIX_LYPXL_bnd  ALIX V-shaped domain binding to HIV
      0.041   13.7   0.7      0.073   12.9   0.7    1.3  1  Nsp1_C          Nsp1-like C-terminal region
      0.051   13.0   0.0      0.085   12.3   0.0    1.3  1  Rogdi_lz        Rogdi leucine zipper containing protein
      0.078   12.1   0.2       0.12   11.4   0.2    1.2  1  Atg14           Vacuolar sorting 38 and autophagy-related sub


Domain annotation for each model (and alignments):
>> ALIX_LYPXL_bnd  ALIX V-shaped domain binding to HIV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   9.7e-06     0.043     183     236 ..     184     236 ..     131     247 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 9.7e-06
  ALIX_LYPXL_bnd 183 diaanefealfeeelekydplqeqleqslakqeellkeiqeaneefeqskksds 236
                     ++a   +e+l+e el   + + +++++  a q+++++e+  +n++++++kk+ +
      KHJ31704.1 184 NLA-GRQEHLMEYELAEVQTIHNAIKTVTATQNAIMAELNLVNRSINEAKKVLQ 236
                     444.4569******************************************9976 PP

>> Nsp1_C  Nsp1-like C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.7   1.6e-05     0.073      58     104 ..     199     245 ..     190     255 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.6e-05
      Nsp1_C  58 kIskLysevleaeqeqnkidqeLeyiesqqdeLeslLdnyEkeleel 104
                 +++ +++++ ++ ++qn+i  eL++++++ +e +++L+  E+++++ 
  KHJ31704.1 199 EVQTIHNAIKTVTATQNAIMAELNLVNRSINEAKKVLQAREDSIKTK 245
                 7999**************************************99876 PP

>> Rogdi_lz  Rogdi leucine zipper containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.9e-05     0.085      85     142 ..     168     240 ..     144     258 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.9e-05
    Rogdi_lz  85 leqLtdlrtlltqaldlLd..........ltlktgdelsks...............aqflssqLrllleslseAkalLkgppe 142
                 + +L ++   +++a   L           l          +               ++ ++++L+l+ +s++eAk++L+ + +
  KHJ31704.1 168 IMPLITAVAKVNSARRNLAgrqehlmeyeL----------AevqtihnaiktvtatQNAIMAELNLVNRSINEAKKVLQARED 240
                 455666667777777777755433333220..........1224445556666677899********************9887 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   2.7e-05      0.12      27     114 ..     171     245 ..     167     258 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.7e-05
       Atg14  27 lrerlaklksekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklkkR 114
                 l + +ak++s++  l ++ e ++e +              a ++++ + i    +  + +++ l   +++i+e+kk l+++ d++k++
  KHJ31704.1 171 LITAVAKVNSARRNLAGRQEHLMEYEL-------------AEVQTIHNAIKTVTATQNAIMAELNLVNRSINEAKKVLQAREDSIKTK 245
                 556788999999999999999999988.............899999999999999999999999999*************99999944 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       720  (0.0401584); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2168.63
//
Query:       KHJ31705.1  [L=327]
Description: hypothetical protein EV44_g0528 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2387.78
//
Query:       KHJ31706.1  [L=540]
Description: hypothetical protein EV44_g2813 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       938  (0.0523175); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 3914.69
//
Query:       KHJ31707.1  [L=594]
Description: putative subunit of the telomeric ku complex [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-38  131.0   0.0    1.3e-37  129.5   0.0    1.7  1  Ku        Ku70/Ku80 beta-barrel domain
    4.5e-33  114.8   4.0    6.4e-33  114.3   4.0    1.2  1  Ku_N      Ku70/Ku80 N-terminal alpha/beta domain
    6.1e-20   71.7   0.3    2.1e-19   70.0   0.3    2.0  1  Ku_C      Ku70/Ku80 C-terminal arm


Domain annotation for each model (and alignments):
>> Ku  Ku70/Ku80 beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.5   0.0   2.1e-41   1.3e-37       1     185 [.     280     467 ..     280     480 .. 0.92

  Alignments for each domain:
  == domain 1  score: 129.5 bits;  conditional E-value: 2.1e-41
          Ku   1 igggvsipVklykateeakkpkfkkldketne..pvkvetkyvcsdtge.vdeedivkgyeyGgevvpltkeelekiksfdskglkllgFvplseilke 96 
                 ig+g++i++++y+   +++  k+ +++  ++e  + ++e   +  dt++ +++ di+++y++Gg++v++  +e + i+ f+s+ l++lgF+++ e +++
  KHJ31707.1 280 IGPGFQISINGYNILHKQNIAKNFWVYDGGEElqIAQIEGGMMTDDTAVpINQADITRAYKFGGTQVYFASKEEKMIRFFESPILRILGFKSKYE-IPI 377
                 799*************************9999887799999999999999*************************888899**************.99* PP

          Ku  97 ylsikssyfiyPddkdekgstkafsaLveamleskkvaivrfvlrskskprlvaLvPqeeelsseee....keglvlvtLpfaddiRslkfps 185
                 ++s  +s fiyP++++  gs+++fsaL++++l s+kv+i+++++r +++p++va+vP+++ +s+  +    + gl+l+t+p+ dd+R  + ps
  KHJ31707.1 378 WMSMSKSIFIYPSEEKVVGSSRVFSALWKKLLTSEKVGIAWYIPRVNASPSIVAIVPSKQLESNT-GkqivPAGLWLHTIPYCDDVR--ETPS 467
                 **********************************************************5544443.3699666**************..4444 PP

>> Ku_N  Ku70/Ku80 N-terminal alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.3   4.0   1.1e-36   6.4e-33       1     218 [.      33     270 ..      33     272 .. 0.91

  Alignments for each domain:
  == domain 1  score: 114.3 bits;  conditional E-value: 1.1e-36
                 EEEEEEE-SHHHHCTTCCSCCHHHHHHHHHHHHHHHHHHCTCSEEEEEEEESSSSTBS..........TTTCTTEEEEEECCCHHHHHHHHHHCCHHHC CS
        Ku_N   1 avvfviDvspaMfesskeeespfelalkciaellkrkvisrskDlIavvlygtdesen..........keqlenitvlreldlpdaellkelkqivese 89 
                 a++f i+v+  M+ s+ e+ s    +lkci++++++++i+++kD+++v+l+gt+ s+           + ++++ ++l +l+ p+ae ++ lk i+  e
  KHJ31707.1  33 ALLFAIEVNRGMLSSQLEKDSATVASLKCIYQIMQQQIITSPKDMMGVLLFGTEMSKFqeddkqndltGLDFPHCYLLMDLNIPSAEDVNLLKAIAVGE 131
                 689****************999999*******************************999999999998889***************************9 PP

                 CHHHHCCCTTSS-TTHHHHHHHHHHHHHHTTSSESEEEEEEEESSSSTCC.GHHHHHHHHHHHHHHHHHHCTEEEEEEEC.TSSSCECCTCHHHHCHC. CS
        Ku_N  90 dasveglaedssqasllsaLivclellqkvgkklskkriflftdlddpfe.dsdklelilqklkakDlrderieldllkL.kkakkfdinefykdiik. 185
                 +as+  l  + ++ sl+++L +  +++++ + k+  kr+f++td+d+p+e d++  +++  +  a Dl d +i l+l+++   ++ fd ++fy+di + 
  KHJ31707.1 132 EASQDILNPSTEKVSLSDMLFCVNQIFTNRAQKYGSKRLFIITDNDNPHEqDKSIRSQAAVR--ARDLYDLGIMLELIPIsHFEHRFDRTKFYNDIVYr 228
                 99***********************************************9788888888888..****************8889************872 PP

                 .HHHHHHHHHHHCCCSG........EHHHHHHHHHHHCSCS- CS
        Ku_N 186 .lgsdevkevmlslege........kleellaklkakkkakR 218
                  + +++++ +m+s + +         l++l +++++kk ak 
  KHJ31707.1 229 dPTEEIDNAMMPSKDLNpdeddsisFLNKLVSDISSKKVAKQ 270
                 245677777888877779888888778888888888888775 PP

>> Ku_C  Ku70/Ku80 C-terminal arm
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.0   0.3   3.5e-23   2.1e-19       2      67 ..     496     570 ..     495     591 .. 0.80

  Alignments for each domain:
  == domain 1  score: 70.0 bits;  conditional E-value: 3.5e-23
                 --GGG---HHHHHHHHHHHHHHTT---...---SS--HHHHHHHHH-....HHHHHHHHHHHHH..........H CS
        Ku_C   2 ydpskfpNPsLqrhykiLqalAldedlpe.eledktlpkyeaidkragslleewkelfeleeedke........k 67 
                 ydp k+pNP Lq+hy+iLqa+Al ed+ + ++edkt+p+y++i+krag+ +  w++ +e++  + +        +
  KHJ31707.1 496 YDPWKYPNPTLQWHYRILQAKALGEDILNmKREDKTEPRYRQIEKRAGNFMRRWNKILEEQITICQrnfydtnsN 570
                 9**************************989***************************999755544555554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (594 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 3993.19
//
Query:       KHJ31708.1  [L=175]
Description: putative 60s ribosomal protein l11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.1e-22   77.2   0.0    1.2e-21   76.6   0.0    1.3  1  Ribosomal_L5_C  ribosomal L5P family C-terminus
    4.9e-20   71.6   0.0    1.7e-19   69.9   0.0    1.9  2  Ribosomal_L5    Ribosomal protein L5


Domain annotation for each model (and alignments):
>> Ribosomal_L5_C  ribosomal L5P family C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.6   0.0   1.4e-25   1.2e-21       1      82 [.      67     144 ..      67     165 .. 0.87

  Alignments for each domain:
  == domain 1  score: 76.6 bits;  conditional E-value: 1.4e-25
  Ribosomal_L5_C   1 piGvkvtLrgekmyefldkllevvlprlrdFkGiskssfdgrGnvsfGikeqiifpeieydkdkgifGmditivttak...tdee 82 
                     +i+v+vt+rg+k++e+l++ l+v++++lr      k++f+++Gn++fGi+e+i++ +i+yd+ +gi+Gmd++ ++t++   ++++
      KHJ31708.1  67 KIAVHVTVRGPKAEEILERGLKVKEYELR------KRNFSETGNFGFGISEHIDL-GIKYDPAIGIYGMDFYACMTRPgerVAKR 144
                     69***************************......********************.**********************6553222 PP

>> Ribosomal_L5  Ribosomal protein L5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.9   0.0   1.9e-23   1.7e-19       1      57 []      10      63 ..      10      63 .. 0.99
   2 ?   -1.9   0.0      0.51   4.5e+03       9      18 ..      66      75 ..      66      87 .. 0.73

  Alignments for each domain:
  == domain 1  score: 69.9 bits;  conditional E-value: 1.9e-23
                  SCTTS-EEEEEEEEEE-SSSSSCHHHHHCCHHHHCCCHSS--EECC--TTCTTTCSC CS
  Ribosomal_L5  1 NvMqvPrleKivinmgvGeagedkkllekaakeLaeItGQkPvvtkakksianFkiR 57
                  N+M++ r++K+v+n+ vGe+g++   l++aak+L++++GQ+Pv +ka++++++F+iR
    KHJ31708.1 10 NPMKELRIQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVYSKARYTVRTFGIR 63
                  9**********************...******************************9 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.51
                  EEEEEEEE-S CS
  Ribosomal_L5  9 eKivinmgvG 18
                  eKi +++ v 
    KHJ31708.1 66 EKIAVHVTVR 75
                  7999998885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       338  (0.0188521); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1346.54
//
Query:       KHJ31709.1  [L=438]
Description: putative enolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     2e-154  513.1   0.0   2.6e-154  512.8   0.0    1.1  1  Enolase_C  Enolase, C-terminal TIM barrel domain
    7.8e-58  194.3   0.3    1.6e-57  193.3   0.3    1.5  1  Enolase_N  Enolase, N-terminal domain
    9.2e-06   25.4   0.0    2.1e-05   24.2   0.0    1.5  1  MR_MLE_C   Enolase C-terminal domain-like
  ------ inclusion threshold ------
      0.028   13.6   0.4        1.4    8.0   0.1    2.7  3  MAAL_C     Methylaspartate ammonia-lyase C-terminus


Domain annotation for each model (and alignments):
>> Enolase_C  Enolase, C-terminal TIM barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  512.8   0.0  5.9e-158  2.6e-154       2     294 ..     144     434 ..     143     436 .. 0.99

  Alignments for each domain:
  == domain 1  score: 512.8 bits;  conditional E-value: 5.9e-158
                 -EE-EE-EEEEE-GGGSSSS--SSEEEEE-TT-SSHHHHHHHHHHHHHHHHHHHHHCC.GGGG-B-TTS-B----SSHHHHHHHHHHHHHHCT-TCTBE CS
   Enolase_C   2 lvlPvPalnvinGGshagnklalqefmilPvgassfkealrlGaevyhklksvlkkkygksatnvGdeGGfaPnlqsnkealdliveaiekaGykgkvk 100
                 +vlPvP++nv+nGGshag++la+qefmi+P+ a+sf+ealr+Gaevy+ lks++kkkyg+sa+nvGdeGG+aP++q+++eal+li++aie+aGy+gk+ 
  KHJ31709.1 144 YVLPVPFMNVLNGGSHAGGRLAFQEFMIVPSSAPSFSEALRQGAEVYQILKSLAKKKYGQSAGNVGDEGGVAPDIQTAEEALELITAAIEAAGYTGKIY 242
                 79************************************************************************************************* PP

                 EEEE--GGGCEETCTTEEECTTTTTT..GGCEEEHHHHHHHHHHHHHHS-EEEEES-S-TT-HHHHHHHHHHHTTTSEEEESTTTTT-HHHHHHHHHCT CS
   Enolase_C 101 ialdvassefykekdkkydldfkeeesdkskkltseqladlykelvkkyPivsiedpldeddweawkklteelgdkvqivGddltvtnpkrlkeaiekk 199
                 ia+dvassefyk++ kkydldfk+++sd+sk+lt+eql+dly++l+kkyPivsiedp++eddweaw+++ ++ +  +qivGddltvtnp r+k+aie k
  KHJ31709.1 243 IAMDVASSEFYKQDAKKYDLDFKNPDSDPSKWLTYEQLSDLYQSLAKKYPIVSIEDPFAEDDWEAWSYFYKTSD--FQIVGDDLTVTNPIRIKKAIELK 339
                 **************************************************************************..*********************** PP

                 --SEEEE-HHHH-SHHHHHHHHHHHHHTT-EEEEE--SC--S--HHHHHHHHCT-SEEE---S-SHHHHHHHHHHHHHHHHHGCC-EE-GGGCTT CS
   Enolase_C 200 aanalllkvnqiGsltesleavklakeagygvvvshrsGetedttiadlavglsaGqiktGaparserlakynqllrieeelgekakyaGkkvrk 294
                 ++n+lllkvnqiG+ltes++a+k++++ag+gv+vshrsGeted+tiad++vg++aGqiktGaparserlak+nq+lrieeelg+ka+yaG+k+r+
  KHJ31709.1 340 SCNSLLLKVNQIGTLTESIQAAKVSYTAGWGVMVSHRSGETEDVTIADIVVGIRAGQIKTGAPARSERLAKLNQILRIEEELGDKAIYAGQKFRT 434
                 ********************************************************************************************987 PP

>> Enolase_N  Enolase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.3   0.3   3.5e-61   1.6e-57       1     131 []       3     134 ..       3     134 .. 0.97

  Alignments for each domain:
  == domain 1  score: 193.3 bits;  conditional E-value: 3.5e-61
                 EEEEEEEEEE-TTS-EEEEEEEEETTC-EEEEE--B-BSSSSSS-B----SSTTSGGGT--HHHHHHHHHTHHHHHT..TSBTT-HHHHHHHHHHHH-S CS
   Enolase_N   1 IkkvkareildSrGnpTvevevttedgalgraavpsGaStgekealelrDgdkkrylgkgvekavenvnekiapali..gldvtdqeeiDkllielDgt 97 
                 I+k++ar ++dSrGnpTvev+++te+g l ra+vpsGaStg++ea+elrD dk++++gkgv+kav+nvne+i pali  ++dv+dq+++D++li+lDgt
  KHJ31709.1   3 ISKIHARSVYDSRGNPTVEVDIVTETG-LHRAIVPSGASTGQHEAVELRDADKSKWGGKGVTKAVANVNEIIGPALIkeNIDVKDQTKVDEFLINLDGT 100
                 89**********************988.67**********************************************966699***************** PP

                 TT-TTT-HHHHHHHHHHHHHHHHHHHTS-HHHHH CS
   Enolase_N  98 enksklGaNailavSlAvakaaAkakelplyryl 131
                 +nk klGaNail+vSlAvakaaA++k++ply ++
  KHJ31709.1 101 PNKGKLGANAILGVSLAVAKAAAAEKKVPLYAHV 134
                 *******************************996 PP

>> MR_MLE_C  Enolase C-terminal domain-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   4.6e-09   2.1e-05      26     156 ..     220     375 ..     187     397 .. 0.85

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 4.6e-09
                 HHHHHHHHHHHHHHHHTTTSTSEEEEE-TTT.S.......................BHHHHHHHHHHHGG.GTESEEESSSSTTTHHHHHHHHHHHH.S CS
    MR_MLE_C  26 dvaedvervravreavgpgddvdlmvDanqa.w.......................dlatAirvarelee.ldllwlEEPvppeddleglaelrara.s 98 
                 + +e +e ++a+ ea+g   ++ +++D+  + +                       + ++   + + l++ + +  +E+P+   dd+e+     + + +
  KHJ31709.1 220 TAEEALELITAAIEAAGYTGKIYIAMDVASSeFykqdakkydldfknpdsdpskwlTYEQLSDLYQSLAKkYPIVSIEDPFAE-DDWEAWSYFYK-TsD 316
                 7788999999999999998889999998888536888888899999999999999999999999999*888***********9.78********5.559 PP

                 SEEEESTTSSS.HHHHHHHHHHTSESEEEEBHHHHTSHHHHHHHHHHHHHTT-EEEEBS CS
    MR_MLE_C  99 ipiaagEslys.radfrelleagavdivqpdvsrvgGitearkvaalaeafgvpvapHs 156
                  +i+++    + + ++++++e + +  + ++v+++g +te+++ a++  ++g+ v++ +
  KHJ31709.1 317 FQIVGDDLTVTnPIRIKKAIELKSCNSLLLKVNQIGTLTESIQAAKVSYTAGWGVMVSH 375
                 *****9965444***************************************99988755 PP

>> MAAL_C  Methylaspartate ammonia-lyase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.25   1.1e+03     182     218 ..      84     120 ..      74     126 .. 0.75
   2 ?    2.3   0.0     0.018        79     100     142 ..     254     296 ..     244     306 .. 0.88
   3 ?    8.0   0.1   0.00031       1.4     137     214 ..     314     392 ..     310     401 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.25
      MAAL_C 182 avlyckekgvgaylGGscnetdvsarvsvhvalatrp 218
                     +k  +  + l G+ n  + +a+++  v+la+  
  KHJ31709.1  84 VKDQTKVDEFLINLDGTPNKGKLGANAILGVSLAVAK 120
                 5555566666777899999999***999999999865 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.018
      MAAL_C 100 eeaaapyklliegPldagskeeqierlaelreklkekgikvel 142
                 ++ a+ y+l + +P   +sk+   e+l+ l ++l++k   v++
  KHJ31709.1 254 KQDAKKYDLDFKNPDSDPSKWLTYEQLSDLYQSLAKKYPIVSI 296
                 57899*****************************999776665 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.00031
      MAAL_C 137 gikvelvaDeWcntle.direfvdaeaadlvqiktPDlGginntieavlyckekgvgaylGGscnetdvsarvsvhval 214
                 +++ ++v D+ + t    i++ ++ ++++ + +k+  +G+++++i+a  ++ + g g+++   + et+  + + + v++
  KHJ31709.1 314 TSDFQIVGDDLTVTNPiRIKKAIELKSCNSLLLKVNQIGTLTESIQAAKVSYTAGWGVMVSHRSGETEDVTIADIVVGI 392
                 5678899999877654389****************************************99999999876555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3076.92
//
Query:       KHJ31710.1  [L=271]
Description: putative eukaryotic translation initiation factor 3 subunit j [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.8e-70  236.0  23.4    6.6e-70  235.8  23.4    1.0  1  eIF3_subunit  Translation initiation factor eIF3 subunit
  ------ inclusion threshold ------
       0.27   11.0   2.5       0.77    9.6   2.5    1.7  1  Vpu           Vpu protein


Domain annotation for each model (and alignments):
>> eIF3_subunit  Translation initiation factor eIF3 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  235.8  23.4   7.3e-74   6.6e-70       1     242 []       1     271 []       1     271 [] 0.89

  Alignments for each domain:
  == domain 1  score: 235.8 bits;  conditional E-value: 7.3e-74
  eIF3_subunit   1 Ms.dW..Ddedfepssvakkpavaa...kWddEdededvkdswdaeeeeeeekekakkaaeakak..aakakkkkskkqkiaekeerrkaeeeeaee 89 
                   M+ +W  +d+d ep+ +++++ava+   k++dEded+dv++swda+e++e+e+eka+  ae++ak  a++a++kksk+q+iaek   ++++++ aee
    KHJ31710.1   1 MAgKWieEDDDAEPTPPSSPAAVAVprrKFEDEDEDSDVLESWDAAEDSEVEREKARVSAERQAKleAEAAANKKSKTQRIAEKT--AERARRLAEE 95 
                   666898666666777777666666689*********************************************************9..666777899* PP

  eIF3_subunit  90 eeeleeedeaarkerlrkaeeesDlknaadlFGgv..................attketdlssldlfnpktkedFeelrkalaekltklekksphYs 168
                   ++e++eedea++++rl++ + esD+++a+dlFG                    ++ +  dl++l+lfnp+tk +Fe+lr+ l++ + +++ +++hYs
    KHJ31710.1  96 NDESSEEDEATKRKRLQNFQHESDMAHAEDLFGINnsrkitsaanavqvepndPN-NLLDLTTLPLFNPNTKLQFEKLRDILIPVVGQNS-NKAHYS 190
                   *********************************66***************98644.889*******************************.778*** PP

  eIF3_subunit 169 sfleelirdlakslssedikkvassltvlaneKqkeeKaaekggKkkkkakaktslk........adteayddddddy..DDFM 242
                    fl+e++++lak+l+s +ikk+asslt+l+neK+keeK aekggKk+k+ak+k +l          d++ayd   ddy  DDFM
    KHJ31710.1 191 IFLQEFTKQLAKELPSHQIKKIASSLTALSNEKMKEEKLAEKGGKKSKAAKTKVTLVankniaaiPDVNAYD---DDYgdDDFM 271
                   *******************************************************88333444333444444...445549**9 PP

>> Vpu  Vpu protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   2.5   8.6e-05      0.77      31      73 ..      74     119 ..      70     127 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 8.6e-05
         Vpu  31 kkikkq...keierlikrireraedSgnESdGeeeeelakLvhshg 73 
                 kk k q   ++  ++++r+ e +++S +E +  + ++l++  h+ +
  KHJ31710.1  74 KKSKTQriaEKTAERARRLAEENDESSEEDEATKRKRLQNFQHESD 119
                 4445554448899999999999999999999999999999999754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2365  (0.131909); expected 358.6 (0.02)
Passed bias filter:                      586  (0.0326845); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 1916.37
//
Query:       KHJ31711.1  [L=338]
Description: putative deoxycytidylate deaminase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-28   98.2   0.5    2.8e-28   97.8   0.5    1.2  1  dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-
    9.4e-11   41.6   0.1    1.9e-10   40.7   0.1    1.5  1  MafB19-deam      MafB19-like deaminase
    6.3e-05   23.5   0.0    0.00013   22.5   0.0    1.5  1  AAA_18           AAA domain
     0.0011   18.7   0.0     0.0022   17.7   0.0    1.5  1  CoaE             Dephospho-CoA kinase
  ------ inclusion threshold ------
      0.039   14.1   0.4       0.31   11.2   0.1    2.4  2  AAA_33           AAA domain
       0.12   12.2   0.0       0.53   10.1   0.0    1.8  2  dNK              Deoxynucleoside kinase


Domain annotation for each model (and alignments):
>> dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.8   0.5   9.3e-32   2.8e-28       2     100 ..     181     299 ..     180     300 .. 0.96

  Alignments for each domain:
  == domain 1  score: 97.8 bits;  conditional E-value: 9.3e-32
                      HHHHHHHHHHHHHHHHHHTTTSCSEEEEEEETTEEEEEEESBHHCCTG.......................TTB-HHHHHHHHHHHHTSSCETT CS
  dCMP_cyt_deam_1   2 ekdekllelalkaakeaqkcsnfkVGavivkngeiistgyngepaggs.......................ktiHAEvnAilkaaknggskleg 72 
                      ++d+++++la +aa+++ +c++ +VG+v+v+++++istgyng+p+g                          +iHAE nA+l+a+++ +++ eg
       KHJ31711.1 181 SWDQYFMQLASLAAQRS-NCMKRRVGCVVVREKRVISTGYNGTPRGLRncgdggcprcnegqlsgiglgtcLCIHAEENALLEAGRE-RIR-EG 271
                      79***************.*******************************************************************99.434.79 PP

                      EEEEEEE--BHHHHHHHHHHT-SEEEEE CS
  dCMP_cyt_deam_1  73 atlyvtlePCsmCakaiiqsgikkvvvg 100
                       +ly+ ++PC +C+  i q+gi++vv+ 
       KHJ31711.1 272 SILYCDTCPCLTCSIKITQVGISEVVYS 299
                      **************************96 PP

>> MafB19-deam  MafB19-like deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.7   0.1   6.2e-14   1.9e-10       2     103 ..     181     302 ..     180     316 .. 0.92

  Alignments for each domain:
  == domain 1  score: 40.7 bits;  conditional E-value: 6.2e-14
  MafB19-deam   2 dkekafrkalaevekatkikedkigavivkdkkviargsn.......................ekelnakataHaEiaalqqAakklkskrlddatly 76 
                  +++++f++ ++++ +++++ ++ +g+v+v +k+vi +g+n                          l      HaE +al  A   + +   ++ +ly
   KHJ31711.1 181 SWDQYFMQLASLAAQRSNCMKRRVGCVVVREKRVISTGYNgtprglrncgdggcprcnegqlsGIGLGTCLCIHAEENALLEA---GRERIREGSILY 275
                  589*****************************************************99998887777888999********99...6666778***** PP

  MafB19-deam  77 vtlepCdmCagaivqaglkklvygagn 103
                   +  pC  C   i q g+ ++vy  ++
   KHJ31711.1 276 CDTCPCLTCSIKITQVGISEVVYSQSY 302
                  **********************98764 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   4.4e-08   0.00013       1     120 [.       3     119 ..       3     130 .. 0.67

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 4.4e-08
      AAA_18   1 IlltGtpGvGKttlakeLskrlgfgvnlrdvakenglllevdpealdeskrldedkldklldaleenss...aleegknlvidghlaeleseaakdikk 96 
                 I+l+G +++GK+t+a++L  ++         +k  +l+ +  pe +++  ++ +dk+++ +da +       + +  + +v  +++++++ e++ ++ +
  KHJ31711.1   3 IGLCGGICSGKSTIADYLMTHH--------SFKRLYLRSTTLPENTSDLSKISKDKTEYTFDASDDLLLfvtK-RWREKWVTTDIHNQNILESFLRRPF 92 
                 89****************9995........5555555555555555566666666666666666666666642.2233334455555544444444444 PP

      AAA_18  97 ...vvLtaspeelleRlekRgyeeaki 120
                    + ++a+   ++ R ++R +++ ++
  KHJ31711.1  93 filISVDAPICLRWNRWKARQKQNSEK 119
                 455999999999999*99999888775 PP

>> CoaE  Dephospho-CoA kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   7.5e-07    0.0022       1      22 [.       1      22 [.       1      30 [. 0.87

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 7.5e-07
                EEEEEEESTTSSHHHHHHHHHH CS
        CoaE  1 livgltGgiasGKstvanlfad 22
                +++gl Ggi sGKst+a+++  
  KHJ31711.1  1 MLIGLCGGICSGKSTIADYLMT 22
                68****************9976 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1    0.0001      0.31       2      47 ..       3      69 ..       2     116 .. 0.55
   2 ?   -1.0   0.0      0.58   1.7e+03      21      70 ..     147     196 ..     141     207 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0001
      AAA_33  2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqqskt...................d 47
                + l+G  +sGKst a+ l+ ++      l+s tl ++     + sk                    +
  KHJ31711.1  3 IGLCGGICSGKSTIADYLMTHHSfkRLYLRSTTLPENTSDLSKISKDkteytfdasddlllfvtkrW 69
                668****************999955444777776666665433333222233444444444433322 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.58
      AAA_33  21 kklgavllssdtlrrrlfgtdqq.sktdytrvldrlyqilnelarkalsag 70 
                  + ++ ll++ +++++l++t  + ++ ++ r+++++ q   +la   ++++
  KHJ31711.1 147 SRATVRLLNTSSCLDQLYATLGKlDLMNQERLRPSWDQYFMQLASL-AAQR 196
                 5556667888888888888655535556777777777766666644.3333 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00018      0.53       4      68 ..       6      69 ..       3      86 .. 0.80
   2 ?    0.1   0.0      0.21   6.2e+02     106     146 ..      73     115 ..      69     130 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00018
                EESTTSSHHHHHHHHHCCSTCEEEE-HHHHCCSSSSHHHHHHHHSHHHHHHHHHHHHHHHHHHHH CS
         dNK  4 eGnIgaGKstlvklLskklgvkvfeEpvdkwtnvqknlLekfYkdpsrwsfalqtyvllsrlkqq 68
                 G I +GKst+++ L  +  +k ++    +  + ++  L+k+ kd+++++f   + +ll  +k+ 
  KHJ31711.1  6 CGGICSGKSTIADYLMTHHSFKRLYLRSTTL-PENTSDLSKISKDKTEYTFDASDDLLLFVTKRW 69
                699****************9*9999877777.78889************9998887777666655 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.21
                 HHHHHHHHHHHHHHCCH-SEEEEEE--HHHHHH..HHHHCTTC CS
         dNK 106 lkiykelldnlleelakpdlliYLkasletcle..rikkRgre 146
                 + + +   +n+le + +  ++i + ++   cl+  r k R+++
  KHJ31711.1  73 WVTTDIHNQNILESFLRRPFFILISVDAPICLRwnRWKARQKQ 115
                 555555567888999999*************963355555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       821  (0.0457917); expected 358.6 (0.02)
Passed bias filter:                      592  (0.0330191); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 2516.15
//
Query:       KHJ31712.1  [L=247]
Description: putative 37s ribosomal protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.2e-10   39.7   0.3    1.3e-09   38.1   0.0    2.0  2  Ribosomal_S18  Ribosomal protein S18
  ------ inclusion threshold ------
       0.08   12.4   0.0       0.13   11.7   0.0    1.2  1  PHB_depo_C     PHB de-polymerase C-terminus


Domain annotation for each model (and alignments):
>> Ribosomal_S18  Ribosomal protein S18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.0   1.5e-13   1.3e-09       6      52 .]     177     223 ..     173     223 .. 0.95
   2 ?   -3.8   0.1       1.8   1.6e+04       4      11 ..     231     238 ..     229     240 .. 0.73

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 1.5e-13
  Ribosomal_S18   6 dYkdvelLsqFiterGkIlprriTGlcakhQrklakaIkrARhlaLL 52 
                    +Y++  ++s+ +t  G+I+pr+ T l   +Qr++akaI+r+  ++++
     KHJ31712.1 177 HYRNFSIMSEWMTPMGRIKPRKETALRPVNQRRIAKAIRRSIGIGIM 223
                    6***************************************9888876 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 1.8
  Ribosomal_S18   4 kidYkdve 11 
                    +i Ykd +
     KHJ31712.1 231 EILYKDLK 238
                    57799976 PP

>> PHB_depo_C  PHB de-polymerase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.4e-05      0.13      72     121 ..     104     154 ..      93     164 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.4e-05
  PHB_depo_C  72 slvkgdgdeadkhrefyDeylavlDltaefylq.tveevfqefalakgklk 121
                 +l+k+  ++++k  + y ey+  +Dl+++ y q  + +v+  + l + +l 
  KHJ31712.1 104 RLMKNSIESTKKTVDKYKEYNGAIDLSSQIYRQwKIGDVYAPHDLHQAELS 154
                 68899999***********************99569********9999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       461  (0.0257125); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1808.07
//
Query:       KHJ31713.1  [L=709]
Description: putative autophagy-related protein 7 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   7.5e-105  350.8   0.0   9.9e-105  350.5   0.0    1.1  1  ATG7_N        Ubiquitin-like modifier-activating enzyme ATG7 
    1.6e-40  139.1   0.0    2.3e-40  138.5   0.0    1.1  1  ThiF          ThiF family
  ------ inclusion threshold ------
        0.2   11.0   0.0        1.2    8.5   0.0    2.1  2  2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, 


Domain annotation for each model (and alignments):
>> ATG7_N  Ubiquitin-like modifier-activating enzyme ATG7 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  350.5   0.0  1.7e-108  9.9e-105       1     300 []      12     341 ..      12     341 .. 0.97

  Alignments for each domain:
  == domain 1  score: 350.5 bits;  conditional E-value: 1.7e-108
                 ---B---EEE-HHHHHHHHHHHHHTTTT----EEEEEEE-S-..-CTTB---EEE-GGGS------BTTBEEEEEEEEEESSHHHHHCS-CHHHHHHHH CS
      ATG7_N   1 LqFapfssaielsFwhelaslKldelkLddsarpilglyelr..daselssrlsldassletsdevpkgevraeGtlknfNTieeFknldkkallkeaa 97 
                 L+Fapf+s+iel+F+ ++ ++K+d+++Lddsarp++glye+r  + +e+s+r+++ +++l ts++ p+g++raeG +knfNTie+F+n++k+a+++ +a
  KHJ31713.1  12 LKFAPFTSEIELPFYRAFFNSKIDVDRLDDSARPVIGLYEHRlsSFPETSCRMQILENAL-TSQDIPTGHIRAEGKIKNFNTIEKFRNAEKTAIIQMVA 109
                 8*****************************************76667*************.999*********************************** PP

                 HHHHHHHHTTHHHH-GGGTT-EEEEEEEETTTTEEEEEEEEEEEE-SS--EEEE.EEEHHHHS-HHHHHHHHHHHHHHHHSTTTTT--EEEEEEETTS- CS
      ATG7_N  98 kkiweaiksgkaledpslLssflllsFADLKkykFyYwfafPalklskpawvlseeksaseelsekeleslveavqklrkssderqegfflvkksreee 196
                 k+iw+ai+++++ + pslL+sf+++sFADLKkykF+YwfafPal+ skpawv++  +++  +l+  e+++l+ea+  +r+s d r++gffl+k++r  +
  KHJ31713.1 110 KQIWDAINDSTIFSIPSLLASFIIISFADLKKYKFTYWFAFPALH-SKPAWVRN-ATEKPIQLTGLETSALTEAYGLWRYSIDPREHGFFLAKRVRPGN 206
                 ********************************************7.******88.7778889999*******************************999 PP

                 ....................EEEE-GGGHHH...H-STTEEEEEEEE-----TTS-BTTHHHHHHHHHHHH--SEEEEEEE-EET.TEE-TT.TSEEEE CS
      ATG7_N 197 ....................leiaslselee...ededeedvyvgfvDpssleenpGWpLRNlLvllrarwklkkvkvlcyRdskasakreeerSlvle 272
                                     +ei+sls++++   + ++++d++v+fvDps+ +++pGW LRN+Lvl+r+ +k++kv++lcyRd   +++r+e+rSlvl 
  KHJ31713.1 207 sckeimsgsedsapysigyeWEIGSLSKFQSgffDGVEKSDQFVAFVDPSTFPDHPGWILRNYLVLIRKLFKISKVQILCYRDA--HSRRHEARSLVLL 303
                 9*******************************9888999*********************************************..889********** PP

                 EE..........--EEEEE--B.TTBS--EEEE-TTT- CS
      ATG7_N 273 lk..........lpkavGWernekgklgprlvdLselM 300
                 l+          +p + GWern+ gk++p+l+dLs++M
  KHJ31713.1 304 LEtddsipipdsMPVTTGWERNNYGKIAPKLIDLSQYM 341
                 **99*999999988878********************9 PP

>> ThiF  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.5   0.0   3.8e-44   2.3e-40       8     209 ..     362     610 ..     350     644 .. 0.84

  Alignments for each domain:
  == domain 1  score: 138.5 bits;  conditional E-value: 3.8e-44
                 HHH.HHHHHHHTSEEEEE--SHHHHHHHHHHHHHTTTEEEEEESSB--GGGGGTBTTS-GGGT...TSBHHHHHHHHHHHT-TTSEEEEEES-C..... CS
                 xxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxx..... RF
        ThiF   8 lge.dgqekLrdskvllvGaGglGsellknLalsGvgkltlvDnDkielsNlnRqflfreedi...GkpKaevaaealqeinpdveveavteri..... 97 
                 +++  +++++rd+k+ll+GaG+lGs++ ++L ++ v+ +t+vDn  +++sN++Rq+lf+++d+   G +Ka +aa al++i+p+ve + +t  +     
  KHJ31713.1 362 IAPsLNLQRIRDTKCLLLGAGTLGSYVSRLLLGWNVKTITFVDNASVSFSNPVRQPLFNFSDCldgGSKKAIAAASALKNIFPGVESKGYTITVpmlgh 460
                 5666889******************************************************************************************** PP

                 .........CGCC..S-HHHHTT-SEEEEESSSHHHHHHHHHHHHHHT-EEEEEEEETTEEEEEEEEE.........CCS-ECTSS-T....GGS.EEC CS
                 .........xxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxx....xxxxxxx RF
        ThiF  98 .........tdet..vleellesvDlVvdalDniearrlvnracvkkgiplieagtlgfegqvvviip.........gktgcyeCldp....sstedpt 172
                          +     +le l+ ++D++++ +D++e+r+l+  +   k + +++ ++lgf++ vv++              gcy+C+d+    +s +d+t
  KHJ31713.1 461 plleeqqshN--DfeILERLIDEHDAIFLLMDTRESRWLPTVIGKAKNKLVLN-AALGFDSWVVMRHGvfspeedgtTPLGCYFCNDVvvpvDSIKDQT 556
                 ***8654333..155699*************************9988866666.************323445778778889******77779******* PP

                 CCCEEHHHHHHCTE-B-HHHHHHHHHHHHHHHHHHH..........................T CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........................x RF
        ThiF 173 ekkvplctsiagnipaiatttavvaglaalellkll..........................s 209
                  ++++++         +++ +a +a+++ +ell ++                          +
  KHJ31713.1 557 LDQQCTV---------TRPGVAPIASAQLVELLASIlqhplgplapapkspsqhgtrfeyerD 610
                 *******.........******************99766655555555444444444444443 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.15     9e+02      75     123 ..      57     105 ..      45     110 .. 0.85
   2 ?    8.5   0.0   0.00019       1.2      22      65 ..     359     402 ..     346     418 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.15
                   HHHHTCEECSHHHHHHH-SEEEE-S--STTTTTSBSHHHHHCSTTTEEE CS
  2-Hacid_dh_C  75 eeelgvelvsleellaesDivslhlpltpetrhlinaeelakmkkgail 123
                   + e+ ++++ le++l + Di + h+ ++ + +++ + e+++   k+ai+
    KHJ31713.1  57 FPETSCRMQILENALTSQDIPTGHIRAEGKIKNFNTIEKFRNAEKTAII 105
                   5567889999************************999***999999987 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00019
                   CCHTTCCGSBS-GTTSEEEEES-SHHHHHHHHHHHHTT-EEEEE CS
  2-Hacid_dh_C  22 ewksekallgkelsgktvGiiGlGrIGqavakrlkafgmkviay 65 
                   +w+   +l  +++++ +  ++G+G +G+ v ++l ++++k i +
    KHJ31713.1 359 KWRIAPSLNLQRIRDTKCLLLGAGTLGSYVSRLLLGWNVKTITF 402
                   67667788999****************************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (709 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       327  (0.0182386); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 4754.91
//
Query:       KHJ31714.1  [L=186]
Description: putative u3 small nucleolar ribonucleoprotein imp3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-12   46.5   0.1    5.3e-12   45.3   0.0    1.7  2  S4             S4 domain
    1.9e-11   44.7   0.2    2.5e-11   44.3   0.2    1.4  1  Ribosomal_S4   Ribosomal protein S4/S9 N-terminal domain
  ------ inclusion threshold ------
      0.071   12.9   0.1        5.8    6.8   0.0    2.6  3  ETC_C1_NDUFA5  ETC complex I subunit conserved region


Domain annotation for each model (and alignments):
>> S4  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.0   8.9e-16   5.3e-12       1      47 [.     112     158 ..     112     159 .. 0.95
   2 ?   -2.7   0.1      0.85   5.1e+03      30      37 ..     164     171 ..     163     172 .. 0.82

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 8.9e-16
                 EEHHHHHHHTTSSSSHHHHHHHHHTTTEEETTEEE--TT-EE-TTCE CS
          S4   1 rRLdkvlarlglassrreArqlIehGrVlVNGkvvkdpsyrVkpgDv 47 
                 rRL +v+ rl++a++   A +lIe+G+V+V  ++++d ++ V+ +++
  KHJ31714.1 112 RRLPVVMTRLRMAETVQAATKLIEQGHVRVGTEPITDTAFLVTRSME 158
                 8*****************************************97765 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.85
                 ETTEEE-- CS
          S4  30 VNGkvvkd 37 
                 V+G ++k+
  KHJ31714.1 164 VDGSKIKK 171
                 99*99995 PP

>> Ribosomal_S4  Ribosomal protein S4/S9 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   0.2   4.2e-15   2.5e-11       1      80 [.       4      63 ..       4     133 .. 0.93

  Alignments for each domain:
  == domain 1  score: 44.3 bits;  conditional E-value: 4.2e-15
                  TT-S-CHHHHCHCTS-STSSSS-S-SSTTTTS-----CHCH.HHHHHHHHHHHHT-S.HHHHHHHHHHHHHCCSHHHHHHHH CS
  Ribosomal_S4  1 rykgpkckllRrvgfklflkgreyppGqhgkrrkklseYgk.qlrekqklkrrYgll.ekqfrryfkearrirGktgenLlq 80
                  ++k +++kllR+v+f                      +Y++ ++++ + ++rrY+++   ++++y++++++++ +++++L +
    KHJ31714.1  4 KLKYHEQKLLRKVDFT---------------------TYKSdNNHRDAAVIRRYNIQkPSDYTKYNRLCGSLK-QLAHRLAA 63
                  5899***********9.....................************************************.******87 PP

>> ETC_C1_NDUFA5  ETC complex I subunit conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       1.6   9.4e+03      11      23 ..       4      16 ..       3      17 .. 0.78
   2 ?    3.5   0.0      0.01        60      17      44 ..      55      82 ..      48     100 .. 0.82
   3 ?    6.8   0.0   0.00098       5.8      35      65 ..     105     139 ..     104     141 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.6
  ETC_C1_NDUFA5 11 aLialytktLkkL 23
                   +L++  +k L+k+
     KHJ31714.1  4 KLKYHEQKLLRKV 16
                   6888888999887 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.01
  ETC_C1_NDUFA5 17 tktLkkLkkiPessvYRqsvEaltkhRl 44
                   ++  + L ++P +s  R++ E+l   +l
     KHJ31714.1 55 KQLAHRLAALPPDSDFRRKHENLLLSKL 82
                   56668899*************9987766 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.00098
  ETC_C1_NDUFA5  35 svEaltkhRlkiVee....eedvekiekkigagqi 65 
                    sv a+++ Rl +V +    +e+v+++ k i++g +
     KHJ31714.1 105 SVSAFCRRRLPVVMTrlrmAETVQAATKLIEQGHV 139
                    7899**********99999************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1412.86
//
Query:       KHJ31715.1  [L=805]
Description: putative complex i intermediate-associated protein 84 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.2e-06   25.8   6.5       0.51   10.4   0.3    5.4  6  PPR_3          Pentatricopeptide repeat domain
    0.00047   20.3   5.1         14    6.0   0.0    6.2  6  PPR_2          PPR repeat family
     0.0013   18.2   0.0        0.1   12.0   0.0    3.1  3  PPR_long       Pentacotripeptide-repeat region of PRORP
      0.003   18.2   1.0         14    6.8   0.0    4.8  5  TPR_14         Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.047   14.0   4.0    1.1e+02    3.4   0.1    6.2  7  PPR            PPR repeat
      0.058   14.1   0.0         20    5.9   0.0    2.6  2  Lumazine_bd_2  Putative lumazine-binding
       0.27   11.4   1.9        3.3    7.8   0.1    2.6  2  DUF262         Protein of unknown function DUF262


Domain annotation for each model (and alignments):
>> PPR_3  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0021       5.4       8      46 ..     221     261 ..     218     262 .. 0.87
   2 !    6.0   0.0    0.0049        12       4      50 ..     368     414 ..     365     418 .. 0.89
   3 ?   -1.9   0.1       1.4   3.7e+03       3      31 ..     476     504 ..     474     519 .. 0.68
   4 ?    2.4   0.0     0.063   1.6e+02      19      53 ..     564     601 ..     557     606 .. 0.79
   5 !   10.4   0.3    0.0002      0.51       8      60 ..     591     644 ..     586     646 .. 0.83
   6 ?   -3.4   0.0       4.3   1.1e+04       1      13 [.     691     703 ..     691     703 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0021
       PPR_3   8 rkgikldvvt..YthLLtayanagnkklalevlermkkkgi 46 
                 ++++ +dv++  +  +L+++a+ +n+  +l+++e  +++gi
  KHJ31715.1 221 QDDFTPDVIDklWLFILKGFAREKNEAELLQTFEIARENGI 261
                 6788888888556678***********************98 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0049
       PPR_3   4 remerkgikldvvtYthLLtayanagnkklalevlermkkkgikPtv 50 
                 r+ +++ +++++ t + L ++++   +  la++ l    k gi+P+ 
  KHJ31715.1 368 RNPDNEVLRPNIHTINGLVKLAMSKNDPYLAERYLTLGVKYGIRPNA 414
                 56677779*************************************96 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.4
       PPR_3   3 lremerkgikldvvtYthLLtayanagnk 31 
                 +++++++g +l+  t t+L + y   g+ 
  KHJ31715.1 476 INDLDERGKRLEALTVTALCNIYLDRGEI 504
                 66778888888888888887777666654 PP

  == domain 4  score: 2.4 bits;  conditional E-value: 0.063
       PPR_3  19 thLLtayanagnkklalevlermkkkgi...kPtvvty 53 
                 t +++ ++  +  + a  +++ m+++ i   kP + ty
  KHJ31715.1 564 TQIMNSFFERRRCDMACHTFGHMRQNTIqdrKPKLETY 601
                 7888999999999*************994444766666 PP

  == domain 5  score: 10.4 bits;  conditional E-value: 0.0002
       PPR_3   8 rkgikldvvtYthLLtayanagnkklalevlermk.kkgikPtvvtyNailgvi 60 
                 +++ k+ + tY + L+++a+  n++ +  v + +k  + i+P+   yNa++ ++
  KHJ31715.1 591 IQDRKPKLETYVSCLEGIAKLANREYLDIVHNMLKlDQDIEPNTTLYNALMLAY 644
                 5677889999***********999998877777773467************887 PP

  == domain 6  score: -3.4 bits;  conditional E-value: 4.3
       PPR_3   1 silremerkgikl 13 
                 +i ++m+r g++l
  KHJ31715.1 691 KIYEKMNRMGVEL 703
                 5889999999985 PP

>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.74   1.9e+03      18      31 ..     115     128 ..     110     136 .. 0.82
   2 ?   -2.8   0.0         3   7.6e+03       8      28 ..     309     329 ..     306     332 .. 0.85
   3 ?    0.6   0.0      0.25   6.5e+02       1      40 [.     377     416 ..     375     418 .. 0.80
   4 ?    4.7   0.1     0.013        34       9      48 ..     566     608 ..     564     610 .. 0.83
   5 !    6.0   0.0    0.0055        14       1      45 [.     632     676 ..     632     681 .. 0.85
   6 ?    4.4   0.1     0.017        44      21      36 ..     688     703 ..     677     705 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.74
       PPR_2  18 kveeAfklfneMkk 31 
                 +ve A++ f++ k+
  KHJ31715.1 115 QVEHALQTFEYLKN 128
                 89*********997 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 3
       PPR_2   8 tlIsglckkgkveeAfklfne 28 
                 t++  +++++++e +  +f++
  KHJ31715.1 309 TILEFCLRNNELEWCKNVFKD 329
                 8999999***99999999886 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.25
       PPR_2   1 pdvvtyNtlIsglckkgkveeAfklfneMkkrglePnsyT 40 
                 p+++t N l +  + k+++  A + +   +k g++Pn+ T
  KHJ31715.1 377 PNIHTINGLVKLAMSKNDPYLAERYLTLGVKYGIRPNART 416
                 7888888888888888888888888877788888888877 PP

  == domain 4  score: 4.7 bits;  conditional E-value: 0.013
       PPR_2   9 lIsglckkgkveeAfklfneMkkrgl...ePnsyTysilikgl 48 
                 +++ ++++++ ++A+  f  M+++ +   +P   Ty + + g 
  KHJ31715.1 566 IMNSFFERRRCDMACHTFGHMRQNTIqdrKPKLETYVSCLEGI 608
                 89*********************98866677777777776665 PP

  == domain 5  score: 6.0 bits;  conditional E-value: 0.0055
       PPR_2   1 pdvvtyNtlIsglckkgkveeAfklfneMkkrglePnsyTysili 45 
                 p++  yN+l+ ++    +   A++++++  +r   Pn ++  i +
  KHJ31715.1 632 PNTTLYNALMLAYTSICEGGRALSFWKDITSRYEGPNYKSLEIFF 676
                 89************************9999988888877766665 PP

  == domain 6  score: 4.4 bits;  conditional E-value: 0.017
       PPR_2  21 eAfklfneMkkrgleP 36 
                 eA k++++M + g+e 
  KHJ31715.1 688 EARKIYEKMNRMGVEL 703
                 8************986 PP

>> PPR_long  Pentacotripeptide-repeat region of PRORP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   3.9e-05       0.1      71     160 ..     358     449 ..     295     451 .. 0.71
   2 ?    1.2   0.0     0.075   1.9e+02     107     168 ..     577     642 ..     555     678 .. 0.61
   3 ?   -0.4   0.0      0.25   6.3e+02      72     127 ..     687     743 ..     667     758 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.9e-05
                 HHHHHHHH..HHHHHTT----HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHHTT-HHHHHHHHHHHHHCT----H CS
    PPR_long  71 largfevf..eamkakgvspnEatvtalarlaaakedgdlafelvkemekagvsPrLRsyaPaLaayckagdadkaleveehlkasgveleE 160
                 ++r   v+  ++ +++  +pn  t+  l++la +k+d  la++  +   k+g+ P  R+    L   c+a+d+  a ++ + l a +v  +E
  KHJ31715.1 358 VERMIGVMirRNPDNEVLRPNIHTINGLVKLAMSKNDPYLAERYLTLGVKYGIRPNARTLILQLNYRCDARDLRGARAAYDALLAEEVIDDE 449
                 3443333300334457889**************************9999*********************************9999997665 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.075
                 HHHHHHHHHHHHH-S-...--HHHHHHHHHHHHHTT-HHHHHHHHHHHH.HCT----HHHHHHHHH CS
    PPR_long 107 dlafelvkemekagvs...PrLRsyaPaLaayckagdadkaleveehlk.asgveleEaelaaLLk 168
                 d+a +   +m++  ++   P+L +y   L    k+ + +    v++ lk  +++e++ + ++aL+ 
  KHJ31715.1 577 DMACHTFGHMRQNTIQdrkPKLETYVSCLEGIAKLANREYLDIVHNMLKlDQDIEPNTTLYNALML 642
                 444444444543332222266666666666666666666555555555423455555555555543 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.25
                 HHHHHHHHHHHHTT----HHHHHHHHHHHHHTT-HHHHHHHHHHHH.HH-S---HHH CS
    PPR_long  72 argfevfeamkakgvspnEatvtalarlaaakedgdlafelvkeme.kagvsPrLRs 127
                  ++++++e+m+  gv+   ++++  +   a+++   +  +lv+++e + g++P  R 
  KHJ31715.1 687 IEARKIYEKMNRMGVELTAPVLAEYMGSLAKNSCWPEVKALVQSIEqEHGLKPDVRM 743
                 456677777777777777666666666666666666777777777635567776665 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       5.3   1.4e+04      23      43 ..     145     166 ..     143     167 .. 0.65
   2 ?    3.5   0.0     0.065   1.7e+02       2      25 ..     184     207 ..     183     216 .. 0.88
   3 !    6.8   0.0    0.0056        14       2      40 ..     305     345 ..     304     348 .. 0.79
   4 ?   -1.9   0.0       3.5   8.9e+03      12      38 ..     346     376 ..     342     377 .. 0.57
   5 ?    1.8   0.5      0.22   5.7e+02      13      30 ..     426     443 ..     412     451 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 5.3
      TPR_14  23 llrralalaPdd.aeawlllaq 43 
                 l+ +al++ P+d  + +l la+
  KHJ31715.1 145 LASKALKRVPKDnTDHHLNLAK 166
                 6778888888651556677765 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.065
      TPR_14   2 eallalaeallalGdpdeAiallr 25 
                 +a + + e l   G++ eA++ll+
  KHJ31715.1 184 QAFQYYIETLSLTGNTTEARELLE 207
                 578899999*************98 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0056
      TPR_14   2 eallalaeallalGdpdeAiallrralalaP..ddaeawll 40 
                 + l+ ++e++l++ +++   +++++al+l+P  + +++ ll
  KHJ31715.1 305 QTLATILEFCLRNNELEWCKNVFKDALSLNPskGTWDVVLL 345
                 56788899**********************95444555555 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 3.5
      TPR_14  12 lalGdpdeAiallrr....alalaPddaeaw 38 
                 +a+G   + ++  +r    +++++Pd+++++
  KHJ31715.1 346 WAAGAMGKGVEDVERmigvMIRRNPDNEVLR 376
                 5555544444444452222577999998875 PP

  == domain 5  score: 1.8 bits;  conditional E-value: 0.22
      TPR_14  13 alGdpdeAiallrralal 30 
                  ++d+++A+a+++++la 
  KHJ31715.1 426 DARDLRGARAAYDALLAE 443
                 4789***********996 PP

>> PPR  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0         2   5.2e+03      12      24 ..     195     207 ..     190     208 .. 0.82
   2 ?   -2.0   0.0       2.3     6e+03       6      31 .]     236     261 ..     233     261 .. 0.83
   3 ?   -0.9   0.0      0.98   2.5e+03       9      25 ..     313     329 ..     308     334 .. 0.82
   4 ?    2.0   0.0      0.12     3e+02       6      29 ..     566     589 ..     564     591 .. 0.90
   5 ?    2.6   0.1     0.074   1.9e+02       2      27 ..     636     661 ..     635     664 .. 0.88
   6 ?    3.4   0.1     0.042   1.1e+02      18      31 .]     688     701 ..     684     701 .. 0.92
   7 ?   -2.3   0.0       2.8   7.2e+03       8      26 ..     713     731 ..     712     734 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2
         PPR  12 knGkleeAlelfk 24 
                   G+  eA el++
  KHJ31715.1 195 LTGNTTEARELLE 207
                 57999******97 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 2.3
         PPR   6 lIsgycknGkleeAlelfkeMkekGi 31 
                 +++g++++ +  e l+ f+  +e+Gi
  KHJ31715.1 236 ILKGFAREKNEAELLQTFEIARENGI 261
                 6899***9999999999988888886 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.98
         PPR   9 gycknGkleeAlelfke 25 
                  + +n++le ++ +fk+
  KHJ31715.1 313 FCLRNNELEWCKNVFKD 329
                 5889***********97 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.12
         PPR   6 lIsgycknGkleeAlelfkeMkek 29 
                 +++++   +++++A   f  M+++
  KHJ31715.1 566 IMNSFFERRRCDMACHTFGHMRQN 589
                 7999*****************986 PP

  == domain 5  score: 2.6 bits;  conditional E-value: 0.074
         PPR   2 tynslIsgycknGkleeAlelfkeMk 27 
                  yn+l+ +y +  +   Al+++k++ 
  KHJ31715.1 636 LYNALMLAYTSICEGGRALSFWKDIT 661
                 5**********999999999999876 PP

  == domain 6  score: 3.4 bits;  conditional E-value: 0.042
         PPR  18 eAlelfkeMkekGi 31 
                 eA +++++M ++G+
  KHJ31715.1 688 EARKIYEKMNRMGV 701
                 9**********997 PP

  == domain 7  score: -2.3 bits;  conditional E-value: 2.8
         PPR   8 sgycknGkleeAlelfkeM 26 
                  +++kn ++ e++ l + +
  KHJ31715.1 713 GSLAKNSCWPEVKALVQSI 731
                 6899*******99998765 PP

>> Lumazine_bd_2  Putative lumazine-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.013        32      46      82 ..     163     200 ..     139     207 .. 0.79
   2 ?    5.9   0.0    0.0077        20      87     111 ..     319     343 ..     313     345 .. 0.94

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.013
                    EECHHHHHHHHHHH...-TT-EE-.EEEEEEEEETTEE CS
  Lumazine_bd_2  46 msleellalvaeres.pakegdprekeIesidvagdvA 82 
                    + +++l++ ++ re+ p+k+++++++ Ie+++++g++ 
     KHJ31715.1 163 NLAKALYDEIRGRETdPKKKRQAFQYYIETLSLTGNTT 200
                    3457899999999999*******************975 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0077
                    EEEETTEEEEEEEEEEEETTEEEEE CS
  Lumazine_bd_2  87 elelpdenftDyLslvkidgeWkIv 111
                    ele+ ++ f+D Lsl   +g W +v
     KHJ31715.1 319 ELEWCKNVFKDALSLNPSKGTWDVV 343
                    689********************98 PP

>> DUF262  Protein of unknown function DUF262
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.3     0.058   1.5e+02      99     165 ..     104     173 ..      50     255 .. 0.63
   2 ?    7.8   0.1    0.0013       3.3     146     213 ..     629     706 ..     484     709 .. 0.66

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.058
      DUF262  99 eededrlkrr.eresdkellqkllrseklsleekeelaeln..sltkkdlakeekrneeknlikayevie 165
                 + +++++  r + e++ + +++l + ++++ +ek +l eln  s+  k ++k++++ + +  +++y+ i+
  KHJ31715.1 104 KVKNKEIVNRlQVEHALQTFEYLKNLNSAEISEKLNLPELNlaSKALKRVPKDNTDHHLNLAKALYDEIR 173
                 4444445444355556666665555555555555555555522333333344444433333333333333 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0013
      DUF262 146 akeekrneeknlikayevieeilksa....llsalk........tklslieielese..ddedqayeiFerlNsrGvpLtas 213
                 + e+++++++ l+ ay  i e         +++ +         + l+ i+++ ++e  +   +a +i+e++N  Gv+Lta+
  KHJ31715.1 629 DIEPNTTLYNALMLAYTSICEG---GralsFWKDITsryegpnyKSLE-IFFWACQEsnEGSIEARKIYEKMNRMGVELTAP 706
                 3344455555555555555543...03346444443344443322222.223333223455689****************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (805 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 5438.12
//
Query:       KHJ31716.1  [L=425]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      496  (0.0276647); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.39
# Mc/sec: 3264.23
//
Query:       KHJ31717.1  [L=934]
Description: hypothetical protein EV44_g1892 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      0.004   17.3   2.5        1.2    9.4   0.0    4.2  5  PPR_2          PPR repeat family
      0.007   15.8   0.0       0.35   10.2   0.0    2.8  3  PTase_Orf2     Aromatic prenyltransferase Orf2
  ------ inclusion threshold ------
       0.24   11.3   1.4        5.8    6.9   0.1    2.8  2  Ribosomal_L30  Ribosomal protein L30p/L7e


Domain annotation for each model (and alignments):
>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.87   5.2e+03      18      43 ..     181     206 ..     173     207 .. 0.87
   2 ?   -3.6   0.0       2.3   1.3e+04       9      25 ..     373     389 ..     372     390 .. 0.82
   3 ?    3.5   0.1     0.014        84       4      34 ..     445     475 ..     443     477 .. 0.94
   4 ?    0.8   0.1     0.096   5.8e+02       3      39 ..     550     586 ..     548     594 .. 0.82
   5 !    9.4   0.0    0.0002       1.2       1      38 [.     823     860 ..     823     861 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.87
       PPR_2  18 kveeAfklfneMkkrglePnsyTysi 43 
                 +ve A k+f    ++gle n  ++++
  KHJ31717.1 181 QVETAAKIFIGTLENGLEFNGASFTV 206
                 577888888888899*****999997 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 2.3
       PPR_2   9 lIsglckkgkveeAfkl 25 
                 + ++l+ ++++ eA ++
  KHJ31717.1 373 IVNHLLANRMFAEAEQV 389
                 67899999999999876 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.014
       PPR_2   4 vtyNtlIsglckkgkveeAfklfneMkkrgl 34 
                 v y ++I+ + ++ +   A++ +n+ +k+++
  KHJ31717.1 445 VFYDIIIKICIEADDTLLAWSYYNKSQKKNC 475
                 7899*********************999998 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.096
       PPR_2   3 vvtyNtlIsglckkgkveeAfklfneMkkrglePnsy 39 
                 + + N +   ++k++++e+ + l+++  ++g + +++
  KHJ31717.1 550 SNSINKIAELYAKERNFESIVCLLHYATNKGYPIDAS 586
                 566677778899***************9999998875 PP

  == domain 5  score: 9.4 bits;  conditional E-value: 0.0002
       PPR_2   1 pdvvtyNtlIsglckkgkveeAfklfneMkkrglePns 38 
                 p++ t ++ ++ + k + v   +k+f+ M k+ + P+ 
  KHJ31717.1 823 PNIETLTVFLNTYIKLEYVPGFWKIFQIMIKNRVFPDQ 860
                 899999******************************96 PP

>> PTase_Orf2  Aromatic prenyltransferase Orf2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.023   1.4e+02     227     259 ..     158     190 ..     149     200 .. 0.87
   2 !   10.2   0.0   5.9e-05      0.35     176     228 ..     391     443 ..     375     457 .. 0.84
   3 ?   -1.9   0.0       0.3   1.8e+03      13      76 ..     540     608 ..     534     616 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.023
  PTase_Orf2 227 endaeflprlgtkiarFvqeaPsqdkeeknvva 259
                 ++d  fl+ l+++i  F+++ P q+++   ++ 
  KHJ31717.1 158 KEDISFLSVLEQRISYFLDQSPPQVETAAKIFI 190
                 567789********************9999875 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 5.9e-05
  PTase_Orf2 176 eevatlirlvGseppseeklalmreaftvavTidldsgdieRvsfyalklpen 228
                   +  + r++G  +p+   l+l+r+++ v+  +d     + Rv++y++ + ++
  KHJ31717.1 391 ATAENISRKSGYFSPATPCLILIRKNWEVYQDLDKTVALFDRVGYYIQSVRNQ 443
                 4556799****************************************998655 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.3
  PTase_Orf2  13 laallevtyseraveevlevfke..nfargvvlwrvttkeadslnfRf...ysrekiDtveiAiskgLl 76 
                 la  +++ ++ + ++++ e +++  nf+  v l++ +t+++  +++ f     ++  D  +  i+k Ll
  KHJ31717.1 540 LAFKMGISLNSNSINKIAELYAKerNFESIVCLLHYATNKGYPIDASFinmILKQSNDSWKYSIEKVLL 608
                 566677888899999999988643389999999999999998888888433346667887777777776 PP

>> Ribosomal_L30  Ribosomal protein L30p/L7e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.1   0.00097       5.8      23      41 ..     138     156 ..     136     158 .. 0.93
   2 ?    2.0   0.2     0.032   1.9e+02       3      27 ..     901     931 ..     900     932 .. 0.89

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.00097
                    TT-SSTTEEEE--SSHHHH CS
  Ribosomal_L30  23 LgLrkingtvvklntpsir 41 
                    L Lrk+n++ v+ ++psi+
     KHJ31717.1 138 LQLRKLNSVRVLSTSPSIQ 156
                    88***************98 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.032
                    EEE-S-......STTS-HHHHHHHHHTT-SS CS
  Ribosomal_L30   3 Vtrirs......iigvppkvrktLqlLgLrk 27 
                    V++irs       ig+++ ++k+ + L+L k
     KHJ31717.1 901 VKQIRSqnfserHIGTTKVIKKIEENLRLLK 931
                    89999999999999*********99999966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (934 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.26s 00:00:00.91 Elapsed: 00:00:00.40
# Mc/sec: 7024.28
//
Query:       KHJ31718.1  [L=401]
Description: putative solute carrier family 25 member 38 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.2e-63  210.2   0.5    5.4e-22   77.5   0.1    3.6  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.0   0.0   5.6e-23     1e-18       4      95 ..      56     146 ..      53     148 .. 0.93
   2 !   61.7   0.0   2.7e-21   4.8e-17       6      91 ..     153     243 ..     150     249 .. 0.87
   3 !   77.5   0.1     3e-26   5.4e-22       3      93 ..     254     387 ..     252     389 .. 0.87

  Alignments for each domain:
  == domain 1  score: 67.0 bits;  conditional E-value: 5.6e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHH.HGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGl.rglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 ++l++++aGgl+g+++ l+++ ld+vKtr q +++   k    ++ +++  i+++eG+ rgly G+lp+ll+++p +++ f++ye+ kr + +
  KHJ31718.1  56 PYLHSMIAGGLGGTTGDLLMHSLDTVKTRQQGDPHFPPKYS--SMSSTFTLILRQEGIrRGLYGGWLPALLGSFPGTVIFFGTYEYSKRNMID 146
                 68999******************************988754..4**************999***************************98876 PP

  == domain 2  score: 61.7 bits;  conditional E-value: 2.7e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS.....HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaa.....ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkr 91 
                 l++l++G +a  +a+++  P +v+Ktrlq+q++ ++   +++     +ld+ ++i+++eG+++l+ G+ +++ r  p sal+f +ye+ + 
  KHJ31718.1 153 LAYLVSGFIADFAASFIYVPSEVLKTRLQLQGRYNNPFFNSGynyksTLDAARSIIRQEGVSALFYGYKATICRDLPFSALQFYFYEQGRM 243
                 6789**************************99995543333345566****************************************9765 PP

  == domain 3  score: 77.5 bits;  conditional E-value: 3e-26
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS...........................................HHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa...........................................ildvlkkiyke 58 
                 ++++ el++G+++g +a+++t+Pldv+Ktr+qtq +s+  + +++                                           +++ l+ iy++
  KHJ31718.1 254 IGLTLELMTGAISGGLAGVITCPLDVIKTRMQTQISSQPGNDNNSvsqshqvkklldknispkqifqnvpapfssspekisvnlntssMISGLQIIYRS 352
                 677889***************************6666555554445566667778888888888888899999999999999999999*********** PP

                 HHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr  59 eGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 eGl+gl+rG++p+l+++ ++s+++++ly+ ++++l
  KHJ31718.1 353 EGLSGLFRGAGPRLVWTGVQSGCMLFLYQRIIQHL 387
                 *****************************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       520  (0.0290033); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2952.71
//
Query:       KHJ31719.1  [L=280]
Description: hypothetical protein EV44_g1587 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-17   62.9   0.0    3.8e-17   62.6   0.0    1.1  1  ELP6        Elongation complex protein 6
     0.0065   16.0   0.3      0.013   15.0   0.3    1.5  1  Elong_Iki1  Elongator subunit Iki1
  ------ inclusion threshold ------
      0.057   12.9   0.1      0.093   12.2   0.1    1.2  1  DUF2452     Protein of unknown function (DUF2452)


Domain annotation for each model (and alignments):
>> ELP6  Elongation complex protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.6   0.0   6.3e-21   3.8e-17      32     240 ..      47     255 ..      20     267 .. 0.73

  Alignments for each domain:
  == domain 1  score: 62.6 bits;  conditional E-value: 6.3e-21
        ELP6  32 FLiHHflsfylkag.....ckvvfvalvqsfsHysivaqkLGvsLtqakekgqlvFleGLkesldvllqeepeseetealkfldesnaasLkslyefvk 125
                 +L  H l   lk++     ++v++v++++    ++  +q+LG++L   k+ +q+ Fl+GL     ++l+e+  s++t+  + l   ++ +L+ + + ++
  KHJ31719.1  47 WLALHLLRRTLKSDetiepAAVLLVSFLRDEYFWEDAGQRLGLNLPRFKQTKQYGFLDGLSG---LFLEEK-LSQNTNCDQTL---QSPDLQYIAKKIR 138
                 5555556555555422222689**************************************87...445544.66666766667...44569******** PP

        ELP6 126 salkesedgeeewkppvllvDdlsvLlsl..gvsaaa....vldFihyCratvcsklkgnvvvlvradeeeedeeeelllkslkHqsslalkveGLatG 218
                 +a+k+ ++  +++k  +l++D ++vLl +   +++      ++d  +  +atv++      + lv + +   + ++ ++l s++Hq+s +++++ L+tG
  KHJ31719.1 139 TAIKTLKE--DNEKKLLLILDGIDVLLAAakDMDPFMledmIIDLREEVHATVLTLS-AD-LPLVASLQTPLERNHAAFLMSIAHQASFIMNLRLLDTG 233
                 ******97..889999************94424444400114555555666655433.33.345555566667777889999***************** PP

        ELP6 219 yckdvHGqlevlwrrrqedeqk 240
                  +kdv G ++++ ++++ +++ 
  KHJ31719.1 234 IAKDVSGVIRITCKESHGEDRY 255
                 ***********99998874443 PP

>> Elong_Iki1  Elongator subunit Iki1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.3   2.2e-06     0.013       5     159 ..      25     231 ..      22     240 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.2e-06
  Elong_Iki1   5 lLslrdsaSpLtLvlDsleqsakplleelirrakss.....ktkvifvsfetlkk.................................pkgvdvfieat 65 
                  L+l  + S+LtL++  l  +++ l  +l+rr+ +s      + v++vsf   +                                   ++ ++  +++
  KHJ31719.1  25 YLELPSQ-SSLTLITSVLGATSNWLALHLLRRTLKSdetiePAAVLLVSFLRDEYfwedagqrlglnlprfkqtkqygfldglsglflEEKLSQNTNCD 122
                 6777777.9999999999999999999999888766333334567777776444466678888888888899999999999999999944444444444 PP

  Elong_Iki1  66 ersk..klkelakeiksalspkssekkkkalviiDslnplas...likeeslaaflssllsspsvslvavYHtdv...........eyapspltlLkyl 148
                 ++ +  +l+ +ak+i +a+++ +++++kk l+i+D + +l++     +   l  ++  l ++ ++++  ++ +d+           ++ ++ l ++ + 
  KHJ31719.1 123 QTLQspDLQYIAKKIRTAIKTLKEDNEKKLLLILDGIDVLLAaakDMDPFMLEDMIIDLREEVHATV-LTLSADLplvaslqtpleRNHAAFLMSIAHQ 220
                 4433225************888777789**********88764543344456666666665445444.4667777777777777776666777777777 PP

  Elong_Iki1 149 Attiltvesls 159
                 A+ i+++  l+
  KHJ31719.1 221 ASFIMNLRLLD 231
                 77777776665 PP

>> DUF2452  Protein of unknown function (DUF2452)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   1.6e-05     0.093      15      68 ..     115     168 ..     110     177 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.6e-05
     DUF2452  15 lvspervarksdaeDlvelakevqkadefvkanacnkLkviaeqikaLqeqark 68 
                 l + ++  ++ ++ Dl  +ak++++a +++k    +kL +i + i +L + a++
  KHJ31719.1 115 LSQNTNCDQTLQSPDLQYIAKKIRTAIKTLKEDNEKKLLLILDGIDVLLAAAKD 168
                 66677777888999*********************************9998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2182.10
//
Query:       KHJ31720.1  [L=329]
Description: putative chch domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-06   28.5   5.1    2.5e-06   27.5   5.1    1.6  1  CHCH       CHCH domain
     0.0054   17.1   2.5      0.012   16.0   2.5    1.6  1  GCK        GCK domain


Domain annotation for each model (and alignments):
>> CHCH  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   5.1   2.8e-10   2.5e-06       1      34 [.     208     243 ..     208     244 .. 0.97

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 2.8e-10
                 THHHHHHHHHHHHHCTSS..TTTTHHHHHHHHHHHC CS
        CHCH   1 CgeefkeylkClkdnsde..fskCrkefeafkeCvk 34 
                 Cgeefk++++C+ ++ +e  + +C + f+++++C++
  KHJ31720.1 208 CGEEFKAAFSCFVYSKEEpkGVECIDKFKNMQNCFR 243
                 *****************999**************98 PP

>> GCK  GCK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   2.5   1.3e-06     0.012       8      71 ..     202     263 ..     195     266 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.3e-06
         GCK   8 FmkgGgCkesfiawekcveeaeknkedlvekcaevtatlkkCmeahsdYYePiLaaekaaeeev 71 
                  m +G+C e+f a   c+   +  +e    +c + ++++++C  + +d Y + L +e   ++++
  KHJ31720.1 202 GMAHGPCGEEFKAAFSCFVYSK--EEPKGVECIDKFKNMQNCFRQYPDIYGAELDEESSDHDKA 263
                 5999*************97777..4677889*********************999988776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2232  (0.124491); expected 358.6 (0.02)
Passed bias filter:                      631  (0.0351944); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.30s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 2291.36
//
Query:       KHJ31721.1  [L=701]
Description: putative hst3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-28  100.5   0.0    1.2e-08   35.2   0.0    3.7  3  SIR2      Sir2 family


Domain annotation for each model (and alignments):
>> SIR2  Sir2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.0   1.1e-11     2e-07       1      27 [.      32      58 ..      32     138 .. 0.66
   2 !   29.8   0.0   2.8e-11     5e-07      43      93 ..     297     347 ..     279     375 .. 0.79
   3 !   35.2   0.0   6.4e-13   1.2e-08      86     176 ..     376     487 ..     363     488 .. 0.81

  Alignments for each domain:
  == domain 1  score: 31.1 bits;  conditional E-value: 1.1e-11
                -GGGGGGGT---SSSTTSHHHHSCHHH CS
        SIR2  1 GAGiStesGipdfRskeGlyaklakee 27
                GAGiSt +GipdfRsk+Gly+ ++++ 
  KHJ31721.1 32 GAGISTTCGIPDFRSKDGLYSLIQNQY 58
                9*******************9887654 PP

  == domain 2  score: 29.8 bits;  conditional E-value: 2.8e-11
                 HHHHHHHHHHHCCTSS--HHHHHHHHHHHTTCEEEEEES-SSSHHHHTT-S CS
        SIR2  43 evfyniarellaeeaepnaaHkalkklekkgkllrliTQNiDgLekkaGsk 93 
                 ++f++++r++ +  +  +++H+++k l ++g+l+r +TQNiD Le+k G++
  KHJ31721.1 297 YMFMTSFRKKAQLVKSTSETHRFFKVLRDSGRLVRTYTQNIDCLEEKEGLS 347
                 256666677777788999******************************987 PP

  == domain 3  score: 35.2 bits;  conditional E-value: 6.4e-13
                 HHHHTT-SSEEETTEEEEEEEETTTSBEEECCGG..HCHHHCCTT.B-TTTCC................BEEEEE--CTSB-S..HHHHHHHH.HHH.H CS
        SIR2  86 LekkaGskkvvelHGslakakcvkcekkldkeel..qeeieaekvpecekcgk................llkpdvvfFGealp..dklkklie.kve.e 162
                 L+k  G+++v+ lHGsl +++c  c + +d+++    + +++ + p+c++c++                 l+pd+v++Ge+ p  + ++ li+ +++  
  KHJ31721.1 376 LDKFRGVEAVL-LHGSLGSLRCEVCLQLCDWDKDdrIALTSRGTAPDCPHCTAyntkrrvrggraltvgRLRPDIVLYGEEHPnsSLISPLIThDLKlG 473
                 55666777665.9**************99886641044555677889999999****************************997455677777655526 PP

                 -SEEEEES--STST CS
        SIR2 163 adlllviGtSlkVa 176
                  d+llv+GtSlk++
  KHJ31721.1 474 PDMLLVMGTSLKIH 487
                 7**********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (701 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       817  (0.0455686); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.45
# Mc/sec: 4722.10
//
Query:       KHJ31722.1  [L=519]
Description: putative 60s ribosomal export protein nmd3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-80  270.6   5.1    1.5e-80  270.2   5.1    1.2  1  NMD3      NMD3 family
  ------ inclusion threshold ------
       0.17   11.9   6.9        3.6    7.6   2.7    2.5  2  HypA      Hydrogenase/urease nickel incorporation, metallocha


Domain annotation for each model (and alignments):
>> NMD3  NMD3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  270.2   5.1   1.7e-84   1.5e-80       1     243 []      25     255 ..      25     255 .. 0.97

  Alignments for each domain:
  == domain 1  score: 270.2 bits;  conditional E-value: 1.7e-84
        NMD3   1 CcrCGkeieeling..lCedCllkevditegiek.ievevCkeCgryl.pkgkWvkaeleseellaeclkklvekgLkvseeveevkvelvdaefiwte 95 
                 Cc+CG++i+ + ++  lC++C++ +vdi++gi++ ++++ Ck+C+r+l p ++Wv a+ es+ella+clkkl  +gL+        kv++ da+fiwte
  KHJ31722.1  25 CCECGAAIDGTLSTgaLCNECIKLTVDISQGIQReATLHSCKDCERWLlPPSSWVVAAPESRELLALCLKKL--RGLH--------KVRITDASFIWTE 113
                 ********65544468*********************************666********************..****........************* PP

        NMD3  96 phskrikvkvtvqgevrgenetilqqevevevkvkrqqCprCsriagg.yyeaivQvRqkrelteeehkrtfelleqlilkhdahafiskikevkeGlD 193
                 phskrik k+t+q +v    +++lqq++eve+ +++qqCp+C++++++  ++a+vQvRqk     + hkrtf++leqlilkhdah+++++ikevk+GlD
  KHJ31722.1 114 PHSKRIKTKLTIQDSV--SDGVVLQQTFEVEYIIASQQCPDCAKSYTAnIWRACVQVRQK-----VSHKRTFLYLEQLILKHDAHRDTINIKEVKDGLD 205
                 ****************..56999*************************9***********.....********************************** PP

        NMD3 194 fyfgsksaArklveflksevggkvkeseklvsedkksgkevyrltysvrl 243
                 f+f+ +++A+k+v+fl+s++++++k+s++l+s+d ++++++y++tysv+l
  KHJ31722.1 206 FFFSARNQAEKFVDFLNSVTPVRTKKSQELISMDIHTSTKSYKFTYSVEL 255
                 ************************************************97 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   2.7    0.0004       3.6      64     103 ..      16      56 ..       7      70 .. 0.84
   2 ?    5.7   0.1    0.0016        14      54      84 ..     132     161 ..      87     178 .. 0.69

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0004
                 EEEE--EEEETTTS-EEECHHH.HHS-TTTSSS-EEEEESS CS
        HypA  64 ieevpvkvrCreCgkefeleek.alrCpkCgsadveivsGe 103
                 ie+ ++++ C eCg+ ++ + +  + C++C +  v+i +G 
  KHJ31722.1  16 IEKNNATILCCECGAAIDGTLStGALCNECIKLTVDISQGI 56 
                 7899999********99955433556***********9994 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0016
                 C.TTTT-EEEEEEE--EEEETTTS-EEECHH CS
        HypA  54 gtvlegaeLeieevpvkvrCreCgkefelee 84 
                 g vl+  ++e+e + ++ +C +C k+++ + 
  KHJ31722.1 132 GVVLQ-QTFEVEYIIASQQCPDCAKSYTANI 161
                 22232.566699************9998653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (519 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       978  (0.0545485); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3489.87
//
Query:       KHJ31723.1  [L=246]
Description: putative v-snare protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.4e-13   48.6   1.0    7.4e-13   48.6   1.0    1.7  2  V-SNARE_C     Snare region anchored in the vesicle membrane C
    3.7e-05   23.6   0.3    0.00028   20.8   0.0    2.1  2  Sec20         Sec20
  ------ inclusion threshold ------
      0.018   14.5   0.1      0.035   13.6   0.1    1.4  1  Sigma70_r4    Sigma-70, region 4
      0.039   14.5   0.7      0.039   14.5   0.7    1.9  2  APG6_N        Apg6 coiled-coil region
      0.099   12.7   0.3      0.099   12.7   0.3    2.3  3  HTH_19        Helix-turn-helix domain
       0.26   11.9   2.3        7.8    7.1   0.0    2.7  2  Syntaxin-6_N  Syntaxin 6, N-terminal
       0.93    8.8   6.8       0.35   10.2   1.7    2.1  2  GAS           Growth-arrest specific micro-tubule binding
        3.3    7.8   8.0        3.8    7.5   1.9    2.2  2  Sec2p         GDP/GTP exchange factor Sec2p
        8.9    6.7   8.0        4.1    7.8   0.4    2.8  3  KxDL          Uncharacterized conserved protein


Domain annotation for each model (and alignments):
>> V-SNARE_C  Snare region anchored in the vesicle membrane C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.2       6.5   1.3e+04      30      41 ..      86      97 ..      81     101 .. 0.56
   2 !   48.6   1.0   3.7e-16   7.4e-13       3      65 ..     157     219 ..     155     220 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 6.5
   V-SNARE_C 30 dLhsQretLkra 41
                +L+ Q e+ +++
  KHJ31723.1 86 ELKLQSEQVQSS 97
                455555555554 PP

  == domain 2  score: 48.6 bits;  conditional E-value: 3.7e-16
   V-SNARE_C   3 llresdrlknShrivdetisiGaailedLhsQretLkrarsklhnvanrlgksnsiLrsikrR 65 
                  lre++   + ++ +d+ +++G+a+l+dL +Qre+Lk++++kl  van+lg+s   +r i+rR
  KHJ31723.1 157 ALREQNFMAQTNSTLDDYLARGQAVLGDLNQQREMLKGTQKKLYSVANTLGISGEAIRMIERR 219
                 589999999*****************************************************9 PP

>> Sec20  Sec20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.2      0.34   6.8e+02      39      68 ..      64      93 ..      35     107 .. 0.65
   2 !   20.8   0.0   1.4e-07   0.00028      10      83 ..     164     237 ..     160     244 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.34
       Sec20 39 ekleeeykqvedvlsrskklvkklerrdkt 68
                ek+ee +k+++  l   ++ +k l+ ++ +
  KHJ31723.1 64 EKAEERLKNFRAELISFREELKELKLQSEQ 93
                566666666666666666666666555543 PP

  == domain 2  score: 20.8 bits;  conditional E-value: 1.4e-07
       Sec20  10 lraisqllsqevqqSeenleeldastkslekleeeykqvedvlsrskklvkklerrdktdkllvflalglflac 83 
                 + + +  l +   + +  l +l+++ + l+ ++ ++ +v+++l  s + ++++err k+dk + + +  +f   
  KHJ31723.1 164 MAQTNSTLDDYLARGQAVLGDLNQQREMLKGTQKKLYSVANTLGISGEAIRMIERRTKQDKWIFYAGAVIFFGF 237
                 6677788888888999999********************************************99987666543 PP

>> Sigma70_r4  Sigma-70, region 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   1.7e-05     0.035      25      44 ..     201     220 ..     190     222 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.7e-05
                 HHHHHHTS-HHHHHHHHHHH CS
  Sigma70_r4  25 EIgerlgiSrerVrqiekrA 44 
                  ++++lgiS e++r+ie+r+
  KHJ31723.1 201 SVANTLGISGEAIRMIERRT 220
                 589***************97 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.7   1.9e-05     0.039      45      88 ..      59     102 ..      29     112 .. 0.81
   2 ?    0.1   0.1      0.54   1.1e+03      63     100 ..     154     191 ..     151     206 .. 0.64

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.9e-05
      APG6_N  45 qdeeleeleeeleklekeeeelleeLkelekereeleaelaale 88 
                 + ++ e++ee+l++ ++e  +  eeLkel+ + e++++ ++  e
  KHJ31723.1  59 NPSKKEKAEERLKNFRAELISFREELKELKLQSEQVQSSINRTE 102
                 4568899*******************************998766 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.54
      APG6_N  63 eeelleeLkelekereeleaelaaleeelealeeeeer 100
                 e+ +l+e + + ++++ l++ la  ++ l +l+++ e 
  KHJ31723.1 154 ENHALREQNFMAQTNSTLDDYLARGQAVLGDLNQQREM 191
                 56666666666666666666666666666666666554 PP

>> HTH_19  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.4   4.7e+03       2       8 ..      68      74 ..      46      77 .. 0.59
   2 ?   -1.7   0.1       1.6   3.1e+03       8      21 ..      84      97 ..      80     104 .. 0.74
   3 ?   12.7   0.3     5e-05     0.099       4      34 ..     185     218 ..     185     229 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.4
      HTH_19  2 erLkeaR 8 
                erLk +R
  KHJ31723.1 68 ERLKNFR 74
                4455444 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.6
      HTH_19  8 Reelgltqeelaer 21
                 +el+l  e++++ 
  KHJ31723.1 84 LKELKLQSEQVQSS 97
                68999999999984 PP

  == domain 3  score: 12.7 bits;  conditional E-value: 5e-05
      HTH_19   4 LkeaReelgltqeelae...rlgisrskisaiEn 34 
                 L++ Re+l+ tq++l +   +lgis   i++iE 
  KHJ31723.1 185 LNQQREMLKGTQKKLYSvanTLGISGEAIRMIER 218
                 6788**********988888*************4 PP

>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0    0.0039       7.8      47      99 .]      37      88 ..      29      88 .. 0.72
   2 ?    3.5   0.7     0.053   1.1e+02       8      33 ..      92     118 ..      89     222 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0039
  Syntaxin-6_N 47 rkalrsiewdledLeetvriveknpskfkidekelsrrrafveevreevkemk 99
                   ++l   + +++ + e v  +e npsk +  e+ l++ ra + ++ree+ke+k
    KHJ31723.1 37 SASLTAFSRTIDSFSELV-GLELNPSKKEKAEERLKNFRAELISFREELKELK 88
                  445555666666666666.6688888888888888888888888888888875 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.053
  Syntaxin-6_N   8 eeVqkslnkaeslyrrw.erlledtss 33 
                   e+Vq+s+n++e l rr  ++  +++++
    KHJ31723.1  92 EQVQSSINRTELLSRRPhNQNPTVSDN 118
                   789999999999999883343333322 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.7   0.00018      0.35      74     117 ..      57     100 ..      50     107 .. 0.85
   2 ?    1.2   0.3       0.1   2.1e+02      41      90 ..     153     202 ..     151     223 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00018
         GAS  74 rkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfek 117
                 + +  + ek  ++lkn +a+l +  +elk+lk+++e+++  +++
  KHJ31723.1  57 ELNPSKKEKAEERLKNFRAELISFREELKELKLQSEQVQSSINR 100
                 55556789999*************************99987765 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.1
         GAS  41 keernekelseisqenkrlkepLkkaeeeveeLrkqlknyekdkqslknl 90 
                 +e+++ +e + ++q n+ l + L + ++ +  L++q +  +  +++l ++
  KHJ31723.1 153 RENHALREQNFMAQTNSTLDDYLARGQAVLGDLNQQREMLKGTQKKLYSV 202
                 67777788888888888898888888888888888877666666665554 PP

>> Sec2p  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   1.9    0.0019       3.8      51      86 ..      62      97 ..      57     102 .. 0.88
   2 ?    3.6   0.4     0.032        64      41      79 ..     157     195 ..     152     205 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0019
                HHHHHHHHHTTHCHCCCHCTSSSSHHHHCTTTXXXX CS
       Sec2p 51 kneklkeqLkeketlleslqeqLkeLkevlekmeee 86
                k+ek +e+Lk+ ++ l s  e+LkeLk   e++++ 
  KHJ31723.1 62 KKEKAEERLKNFRAELISFREELKELKLQSEQVQSS 97
                78999**********************988888765 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.032
                 HHHHHHHHHHHHHHHHHHHTTHCHCCCHCTSSSSHHHHC CS
       Sec2p  41 arkekealekkneklkeqLkeketlleslqeqLkeLkev 79 
                 a +e++ + + n+ l   L+  +++l +l++q + Lk  
  KHJ31723.1 157 ALREQNFMAQTNSTLDDYLARGQAVLGDLNQQREMLKGT 195
                 55899999999*******************999999865 PP

>> KxDL  Uncharacterized conserved protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       3.9   7.7e+03      48      64 ..       3      19 ..       1      19 [. 0.74
   2 ?    2.9   0.5     0.068   1.4e+02      37      72 ..      64      99 ..      60     111 .. 0.81
   3 ?    7.8   0.4     0.002       4.1       8      39 ..     168     199 ..     154     206 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3.9
        KxDL 48 arfkqgtkllkevkkdL 64
                a f+   k + ++k+dL
  KHJ31723.1  3 AIFNTALKQSTSLKRDL 19
                66778888888888887 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.068
        KxDL 37 alsqerlaklrarfkqgtkllkevkkdLesifkkir 72
                ++++erl+++ra++ +  + lke+k + e++++ i+
  KHJ31723.1 64 EKAEERLKNFRAELISFREELKELKLQSEQVQSSIN 99
                789999999999998888888888877777776665 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.002
        KxDL   8 sedldeilalQaqtsgrlnkknreLlelnals 39 
                 +++ld  la  + ++g ln++ ++L+  ++++
  KHJ31723.1 168 NSTLDDYLARGQAVLGDLNQQREMLKGTQKKL 199
                 568999********************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1194  (0.066596); expected 358.6 (0.02)
Passed bias filter:                      773  (0.0431145); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 1760.44
//
Query:       KHJ31724.1  [L=370]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       816  (0.0455129); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2647.90
//
Query:       KHJ31725.1  [L=278]
Description: putative tbp1-interacting protein tbpip [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-15   57.0   2.3    1.5e-14   53.7   0.1    2.8  2  TBPIP           TBPIP/Hop2 winged helix domain
  ------ inclusion threshold ------
       0.41   11.0   4.7        1.6    9.1   0.0    3.1  2  TFIIE_beta      TFIIE beta subunit core domain
       0.67    9.9   3.0        4.5    7.3   0.3    2.5  2  RXLR_WY         RXLR phytopathogen effector protein WY-domain
        3.1    8.0   7.0          1    9.5   0.7    2.7  2  NYD-SP28_assoc  Sperm tail C-terminal domain
        3.3    7.4   7.6       0.48   10.1   2.5    2.0  2  GDPD            Glycerophosphoryl diester phosphodiesterase f
        6.3    7.0  14.7       0.47   10.6   8.3    2.5  2  Med9            RNA polymerase II transcription mediator comp


Domain annotation for each model (and alignments):
>> TBPIP  TBPIP/Hop2 winged helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.1     5e-18   1.5e-14       1      51 [.      78     128 ..      78     130 .. 0.97
   2 ?    2.2   0.4     0.058   1.7e+02      23      45 ..     167     190 ..     162     216 .. 0.87

  Alignments for each domain:
  == domain 1  score: 53.7 bits;  conditional E-value: 5e-18
       TBPIP   1 eaeelvleylqeqnrPfsvqdvvanlqkklgKtavqkaLdeLvdegkiieK 51 
                 ea el+l+yl++qnrP+s+++++anl++k+gK+++ k L e+++ gki++K
  KHJ31725.1  78 EAIELILKYLRDQNRPYSATEISANLHGKVGKAVADKLLKEMSEMGKIKSK 128
                 6899*********************************************99 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.058
       TBPIP  23 vanlqk.klgKtavqkaLdeLvde 45 
                  +n+++ k++ +a +k+L++L+++
  KHJ31725.1 167 KENIKElKVKLKANTKILETLKST 190
                 568888888889999*****9875 PP

>> TFIIE_beta  TFIIE beta subunit core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00052       1.6       7      51 ..      82     125 ..      79     134 .. 0.73
   2 ?    0.7   2.2      0.22   6.6e+02      44      51 ..     176     183 ..     146     219 .. 0.55

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00052
  TFIIE_beta   7 kiveylKkkdgplsleeIlsylslqldls.dknwllleaLknnpki 51 
                  i +yl+ +++p s  eI  +l    +++     +ll+ + ++ ki
  KHJ31725.1  82 LILKYLRDQNRPYSATEISANLHG--KVGkAVADKLLKEMSEMGKI 125
                 589***************999986..55543333555555555555 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.22
  TFIIE_beta  44 aLknnpki 51 
                  Lk n ki
  KHJ31725.1 176 KLKANTKI 183
                 33333333 PP

>> RXLR_WY  RXLR phytopathogen effector protein WY-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.3    0.0015       4.5      25      44 ..     183     202 ..     173     203 .. 0.90
   2 ?    2.3   0.1     0.053   1.6e+02      11      22 ..     256     267 ..     253     268 .. 0.93

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0015
                 HHHHHHTSTTTHHHHHHHHH CS
     RXLR_WY  25 LleslrktPglkklaksmqk 44 
                  le+l+ tP  k+l ++++k
  KHJ31725.1 183 ILETLKSTPTTKELISNIEK 202
                 47****************98 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.053
                 HHHHTTS-HHHH CS
     RXLR_WY  11 yLLlktnSeeeL 22 
                 +LLl+t+  eeL
  KHJ31725.1 256 DLLLETKTREEL 267
                 8**********9 PP

>> NYD-SP28_assoc  Sperm tail C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.9       0.2     6e+02      38      57 ..     159     178 ..     155     180 .. 0.86
   2 ?    9.5   0.7   0.00035         1      36      59 ..     194     217 ..     192     217 .. 0.95

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.2
  NYD-SP28_assoc  38 lieetesLekqNeeLrnlLk 57 
                     + +e+++L++  +eL+  Lk
      KHJ31725.1 159 MDDEIKELKENIKELKVKLK 178
                     567999*********99997 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00035
  NYD-SP28_assoc  36 aklieetesLekqNeeLrnlLkqy 59 
                     ++li+++e+L+ +N+ ++++L++y
      KHJ31725.1 194 KELISNIEKLRIENNAKKERLHEY 217
                     689*******************99 PP

>> GDPD  Glycerophosphoryl diester phosphodiesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2      0.21   6.1e+02     101     128 ..      26      54 ..      11      92 .. 0.70
   2 ?   10.1   2.5   0.00016      0.48      65     156 ..     161     254 ..     105     266 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.21
                 H..HHHCCSEEEEEEECCCCCCCHHHHHHT CS
        GDPD 101 k..pqnvglnieikipmlseakeeeelqiv 128
                 k  +++ ++++e+k ++++  ke+ e+  +
  KHJ31725.1  26 KetIKSTKVKTEKKPKIEKHKKEKLEG-KK 54 
                 335667777788888877777777662.22 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00016
                 HHHHTSTECCTTCCCCSCCCSSGCC..B...BHHHHHHHHHHCCSEEEEEEECCCCCCCHHHH.HHTCHHHCCCCCSCHHTT..STTCSCEEEES CS
        GDPD  65 eelkrldkiakenkaqlsenrvrle..fpfptleevlkkpqnvglnieikipmlseakeeeel.qivkeilksvdeilkkvlkkadkrkvifssf 156
                 +e+k+l++  ke k +l+ n+  le  ++ pt +e+++ ++++ ++ + k + l+e+k  e++     e++k+ +e++++  +k+ +rk  f++ 
  KHJ31725.1 161 DEIKELKENIKELKVKLKANTKILEtlKSTPTTKELISNIEKLRIENNAKKERLHEYKNGENKiVTREEMSKVDKELVYW-TNKQMARKRAFQCL 254
                 4566666444666666666665555999**********************************977777777777777755.77777777777876 PP

>> Med9  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.4       2.3   6.8e+03      43      43 ..      37      37 ..      20      58 .. 0.53
   2 ?   10.6   8.3   0.00016      0.47      19      78 ..     161     219 ..     143     220 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.3
        Med9 43 r 43
                +
  KHJ31725.1 37 E 37
                2 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00016
        Med9  19 lsskdletktgelrhkLkkarelirelpgidrsveeqeaeieeleeqlakKrelLkkykn 78 
                  ++k+l+ ++ el+ kLk   + +++l+    +++e    ie+l+ ++ +K+e L++ykn
  KHJ31725.1 161 DEIKELKENIKELKVKLKANTKILETLKST-PTTKELISNIEKLRIENNAKKERLHEYKN 219
                 466777777777777777666666666654.455678899******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2500  (0.139439); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 2034.33
//
Query:       KHJ31726.1  [L=149]
Description: putative 60s ribosomal protein l28 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-21   76.2   0.0      5e-21   75.7   0.0    1.2  1  Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27


Domain annotation for each model (and alignments):
>> Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.7   0.0   2.8e-25     5e-21       3     127 ..      28     146 ..      26     147 .. 0.86

  Alignments for each domain:
  == domain 1  score: 75.7 bits;  conditional E-value: 2.8e-25
                     GGTSSTTTTTTTTT-..S--........S--.........---..GGG..---...EEEEHHHHHHTTTTGTTS--......----EEEGGGTTT CS
  Ribosomal_L27A   3 ktgGrGhkGqkkrsg..vkk.kpg.feGGqmplyrrlpkrGfk..nskfkkey...kvvnlkdLdelideerlela......deaeeidleelae 82 
                     ++gGrG +G +++++  ++k +pg f  G++         G++  +++   ++   +v+nl++L++l+++e++++       d+++++dl  l  
      KHJ31726.1  28 HPGGRGLAGGQHHHRtnMDKyHPGyF--GKV---------GMRyfHKQ--GNHfwkPVINLEKLWSLVPAEKRDAYlassnsDTVPVLDLLPL-- 107
                     78**********999999999**999..***.........77744322..222455****************984458988888999999999.. PP

                     TSSS....SE.EEE--S---..--EEEESEE-HHHHHHHHHTT-EEE CS
  Ribosomal_L27A  83 aglikkkdgv.Kvlgkgeltk.klkvkaskfSkkAkekIeaaGGkve 127
                             g+ Kvlgkg+l+k ++ v+a++fSk+A+ kI +aGG ve
      KHJ31726.1 108 --------GYsKVLGKGRLPKvPIVVRARWFSKEAERKITEAGGVVE 146
                     ........***********9966*********************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       255  (0.0142228); expected 358.6 (0.02)
Passed bias filter:                      226  (0.0126053); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 1216.65
//
Query:       KHJ31727.1  [L=1187]
Description: putative condensin subunit cnd1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-59  198.4   2.1    1.1e-58  197.8   1.2    1.9  2  Cnd1_N    non-SMC mitotic condensation complex subunit 1, N-t
    1.5e-47  161.7  13.1    8.6e-45  152.7   1.3    3.6  4  Cnd1      non-SMC mitotic condensation complex subunit 1
      3e-08   33.9   0.3     0.0037   17.6   0.0    4.6  4  HEAT_2    HEAT repeats
    9.2e-07   28.6   7.2       0.39   11.1   0.0    6.4  7  HEAT      HEAT repeat
     0.0004   20.5   0.9        0.4   10.9   0.0    3.4  3  RTP1_C1   Required for nuclear transport of RNA pol II C-term
     0.0025   17.1   2.4     0.0094   15.2   1.4    2.6  2  Cnd3      Nuclear condensing complex subunits, C-term domain
      0.006   17.1   6.2        3.7    8.1   0.1    5.0  6  HEAT_EZ   HEAT-like repeat
  ------ inclusion threshold ------
      0.083   13.6   1.0        1.9    9.2   0.2    3.0  2  DUF573    Protein of unknown function, DUF573
        0.1   11.3   3.1      0.042   12.6   0.4    1.7  2  p450      Cytochrome P450
       0.63   10.1   5.6        2.2    8.3   0.1    4.2  5  ENTH      ENTH domain


Domain annotation for each model (and alignments):
>> Cnd1_N  non-SMC mitotic condensation complex subunit 1, N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.8   1.2     6e-62   1.1e-58       2     166 .]      86     251 ..      85     251 .. 0.95
   2 ?   -3.5   0.0       4.5   8.1e+03     141     160 ..     425     444 ..     424     446 .. 0.92

  Alignments for each domain:
  == domain 1  score: 197.8 bits;  conditional E-value: 6e-62
      Cnd1_N   2 klksklldlllsglsallesvesdlessdeadsvashknaLemygfllqwlvealekessskssaasasargrkkk...kkkkkkkeeawdweaqreri 97 
                 +++sk++dl++sgls+++e +++dles++ +d+va+hk++Le y+fllqw+++a+e ++++ks++a+++ rgr+k+   k++ k+k+++wd ++q++++
  KHJ31727.1  86 HSLSKIFDLIVSGLSTQIEIIHNDLESHE-PDLVAHHKQLLEAYAFLLQWTISAVEMKAAEKSASATQT-RGRGKNtksKSNIKDKDDSWDPSSQLQTA 182
                 6799**********************655.9********************************998877.7777777699999**************** PP

      Cnd1_N  98 leliakvlelklsrlfqttserdeFislftrpaysllEneallKdksirdaifkvlclavkkhghalaa 166
                 l++i++ l+lkl ++f ttserd+Fi+l+trpay +lE+e+++K++sir++ fk+lcla+k+hgh++aa
  KHJ31727.1 183 LNTICNTLKLKLPKIFLTTSERDTFIGLLTRPAYLILETEQRVKNTSIRMHTFKLLCLAIKHHGHGYAA 251
                 ******************************************************************986 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 4.5
      Cnd1_N 141 Kdksirdaifkvlclavkkh 160
                 K++++r  ++k+l +++k h
  KHJ31727.1 425 KSSNVRRNAIKLLRTLIKTH 444
                 88999************999 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1       5.8     1e+04      78     130 ..     286     338 ..     284     342 .. 0.70
   2 !   15.9   0.4   5.5e-06    0.0099      17     110 ..     369     465 ..     366     522 .. 0.83
   3 ?   -2.2   0.0         2   3.6e+03      37      57 ..     966     988 ..     961     997 .. 0.80
   4 !  152.7   1.3   4.8e-48   8.6e-45       3     162 .]    1005    1163 ..    1003    1163 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 5.8
        Cnd1  78 alaalteiseksenaiynllpdiisklsdalnecsewgqitilefLlsyipkd 130
                 a  +l e+s+k+ n   +  p+++s++  +l e+     i+ +++L+++ +++
  KHJ31727.1 286 ADEILRELSNKEFNSNDSKGPKSVSSFIVKLSELAPRVVIKQMTLLAKQLDSE 338
                 66678888888777777777788887777777777777777777777776665 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 5.5e-06
        Cnd1  17 nlveylvepLrkrLkDedpyVRktaaivvakL..ilndmvkekgflsela.klleDenprVvanalaalteiseksenaiynllpdiisklsdalne 110
                 + + ++ e L+ r+ D +py R  ++ v +kL  +++++ k ++  +el  k leD++++V+ na+ +l  + +  +  i+   + +++  +++l++
  KHJ31727.1 369 SQMNAFFEVLEDRFLDINPYCRCRTIQVYIKLceLEQKFPKRRQKAAELStKSLEDKSSNVRRNAIKLLRTLIKTHPFSIMHGSQLSFKEWNSRLES 465
                 566778899999*********************99999***999777775279*****************999998777776666666666655444 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2
        Cnd1  37 VRktaaivvakL..ilndmvkek 57 
                  +  a +++akL  ++ ++++ +
  KHJ31727.1 966 LQAAATLCLAKLmcVSSEYCETN 988
                 5678999*****99999999865 PP

  == domain 4  score: 152.7 bits;  conditional E-value: 4.8e-48
        Cnd1    3 Ralairtlg..cirvpnlveylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteiseksenaiynll 97  
                  R++++++lg  ++++++l++++++ L++rL+D+d+ V++t++++++ Lil++ vk+kg+l e+ak+leDe++r+ +++++++te+s+k+ naiyn +
  KHJ31727.1 1005 RSNVVVALGdmAVCFNHLIDENTDFLYRRLNDKDSSVKRTCLMTLTFLILAGQVKVKGQLGEMAKCLEDEDKRIADLSRMFFTELSTKD-NAIYNHF 1100
                  9****************************************************************************************.******* PP

        Cnd1   98 pdiisklsdalnecsewgqitilefLlsyipkdkqeaeslveklcprlqhansavvlaaikviLs 162 
                  +d++s ls a++e++e++ + il+fL+s+i+kdk+ a++l++kl++rl  ++++++++++ ++Ls
  KHJ31727.1 1101 IDMFSLLS-AQKELEEDALRRILKFLASFIEKDKH-AKQLADKLAARLPRCETERQWNDVTYVLS 1163
                  ********.88************************.**************************996 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0       0.2   3.6e+02       3      42 ..     330     380 ..     328     395 .. 0.71
   2 !    8.1   0.0    0.0019       3.4      29      55 ..     411     437 ..     398     445 .. 0.83
   3 ?   -1.9   0.0       2.6   4.7e+03      16      52 ..     734     775 ..     728     805 .. 0.57
   4 !   17.6   0.0   2.1e-06    0.0037      33      84 ..     989    1046 ..     960    1079 .. 0.53

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.2
      HEAT_2   3 aLlqalendpdpevrraairaLg.......rignp........ealpaLvelled 42 
                 +L ++l +++++ +r a i++ g       r   +        + ++a++e+led
  KHJ31727.1 330 LLAKQL-DSESYSLRCALIEVCGnliadlsR---QeergdnykSQMNAFFEVLED 380
                 688999.9*************9965554421...133444454557777777776 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0019
      HEAT_2  29 npealpaLvellededpavRraaaeaL 55 
                  ++a ++ ++ led++++vRr+a++ L
  KHJ31727.1 411 RQKAAELSTKSLEDKSSNVRRNAIKLL 437
                 678888888999999999999999977 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 2.6
      HEAT_2  16 vrraairaLgrignp....ealpaLvell.ededpavRraaa 52 
                 +++ +++aL ri+++       +  ++ l +d+   vR aa 
  KHJ31727.1 734 LAKYTCIALKRINPTgrlkNGAQFQFSRLpSDHAVLVRLAAM 775
                 555666666666655444433444455554666667777665 PP

  == domain 4  score: 17.6 bits;  conditional E-value: 2.1e-06
      HEAT_2   33 lpaLvell.ededpavRraaaeaLgaig....d..pealpaLkellddddddvvReaAa 84  
                  lp+L+ +l ++ dp +R +++ aLg ++    +  +e+ ++L ++l+d+ d+ v++  +
  KHJ31727.1  989 LPLLITILeRSRDPITRSNVVVALGDMAvcfnHliDENTDFLYRRLNDK-DSSVKRTCL 1046
                  5666666644556666666666666554333213455666666665433.333344333 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1     0.023        41       3      28 ..     329     354 ..     328     357 .. 0.90
   2 !   11.1   0.0   0.00022      0.39       7      29 ..     420     442 ..     419     444 .. 0.90
   3 ?   -2.7   0.0       5.8     1e+04      10      20 ..     764     774 ..     760     775 .. 0.83
   4 ?   -3.0   0.0       7.3   1.3e+04      16      30 ..     788     802 ..     782     802 .. 0.79
   5 ?   -2.5   0.0         5   9.1e+03      16      27 ..     966     977 ..     955     978 .. 0.80
   6 ?    4.2   0.1     0.035        63       2      28 ..     989    1016 ..     989    1019 .. 0.94
   7 !    6.6   0.0    0.0062        11       4      25 ..    1029    1050 ..    1028    1053 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.023
                 HHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgala 28 
                  ll k l ++s + R+a ++ +g+l+
  KHJ31727.1 329 TLLAKQLDSESYSLRCALIEVCGNLI 354
                 68999******************997 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00022
                 HHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   7 kllsDpspeVReaAakaLgalae 29 
                 k l+D+s++VR++A+k L +l++
  KHJ31727.1 420 KSLEDKSSNVRRNAIKLLRTLIK 442
                 679****************9987 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 5.8
                 T-SSHHHHHHH CS
        HEAT  10 sDpspeVReaA 20 
                 sD +  VR aA
  KHJ31727.1 764 SDHAVLVRLAA 774
                 899999***99 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 7.3
                 HHHHHHHHHHHHHHC CS
        HEAT  16 VReaAakaLgalaev 30 
                 V e A+ a+ +l+++
  KHJ31727.1 788 VAEQAISAIYTLSKH 802
                 678999999999886 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 5
                 HHHHHHHHHHHH CS
        HEAT  16 VReaAakaLgal 27 
                   +aA ++L++l
  KHJ31727.1 966 LQAAATLCLAKL 977
                 568999999988 PP

  == domain 6  score: 4.2 bits;  conditional E-value: 0.035
                  HHHHHHHH.T-SSHHHHHHHHHHHHHHH CS
        HEAT    2 lPlllkll.sDpspeVReaAakaLgala 28  
                  lPll++ l ++ +p  R++++ aLg++a
  KHJ31727.1  989 LPLLITILeRSRDPITRSNVVVALGDMA 1016
                  799999999****************997 PP

  == domain 7  score: 6.6 bits;  conditional E-value: 0.0062
                  HHHHHHT-SSHHHHHHHHHHHH CS
        HEAT    4 lllkllsDpspeVReaAakaLg 25  
                  +l + l+D++++V ++++ +L+
  KHJ31727.1 1029 FLYRRLNDKDSSVKRTCLMTLT 1050
                  67889*************9996 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00022       0.4      12      78 ..     386     451 ..     375     478 .. 0.79
   2 ?   -3.1   0.0         5     9e+03      69      92 ..     668     689 ..     659     706 .. 0.64
   3 !    6.2   0.1    0.0061        11       6      81 ..    1032    1123 ..    1029    1146 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00022
     RTP1_C1  12 llpvrahglvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeevlkl 78 
                  + +r + ++   kl+e ++ +  +  +k ++l  ++L+d+ s v  naik+L +L++++p ++++ 
  KHJ31727.1 386 NPYCRCRTIQVYIKLCELEQ-KFPKRRQKAAELSTKSLEDKSSNVRRNAIKLLRTLIKTHPFSIMHG 451
                 56677777777778887776.677889999*******************************998865 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 5
     RTP1_C1  69 dvfpeevlklLleeyeeenekesl 92 
                 + +pe v+ +L + y    e++++
  KHJ31727.1 668 NHIPELVITKLWQVYGV--ERREI 689
                 34589999999999932..22222 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0061
     RTP1_C1    6 kdlqdpllpvrahglvlLrkliekkske..............avldiekilkllleaLkdedsYvYLnaikgLvaLadvf..peevlklLle 81  
                  + l+d+   v+  +l++L+ li + + +              + + i  + +++++ L+ +d  +Y + i +++ L      +e+ l+++l+
  KHJ31727.1 1032 RRLNDKDSSVKRTCLMTLTFLILAGQVKvkgqlgemakcledEDKRIADLSRMFFTELSTKDNAIYNHFIDMFSLLSAQKelEEDALRRILK 1123
                  5799*******************9998899*********9999999999**********************999887653125555555555 PP

>> Cnd3  Nuclear condensing complex subunits, C-term domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.3   2.3e+03     121     140 ..     328     346 ..     282     364 .. 0.53
   2 !   15.2   1.4   5.2e-06    0.0094      38     174 ..     962    1094 ..     950    1155 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.3
                 HHHHHHHHC-TT-HHHHHHH CS
        Cnd3 121 lkllykaLdsednpelqaia 140
                 ++ll+k+Ldse + +l++++
  KHJ31727.1 328 MTLLAKQLDSE-SYSLRCAL 346
                 33444555444.34444444 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 5.2e-06
                  SSHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHS.-HHHHHHHHHHHHHHHHHH-CGGGGGGHH..............HHHHHHHHHHC-TT- CS
        Cnd3   38 keaairelglkcLglfclldkklakenlklflqalskg.neelkiialkaifDllllhglevldkekkedsdeeeeesessksllkllykaLdsedn 133 
                  ++++++ ++  cL+ +++++ +++++nl+l++++l+++ ++  +  ++ a+ D++  +   ++d++                  +++ly+ L+++ +
  KHJ31727.1  962 RDENLQAAATLCLAKLMCVSSEYCETNLPLLITILERSrDPITRSNVVVALGDMAVCFNH-LIDEN------------------TDFLYRRLNDK-D 1038
                  688999******************************8879999***************98.66443..................45666777443.4 PP

                  HHHHHHHHHHHHHHHHHH--..............SHHHHHHHHHHHHH-GG.GTT- CS
        Cnd3  134 pelqaiaaeglcKLllagil..............tdselLsrLvllyFnpe.teen 174 
                  ++++ +    l  L+lag +              ++++ ++ L  ++F +  t++n
  KHJ31727.1 1039 SSVKRTCLMTLTFLILAGQVkvkgqlgemakcleDEDKRIADLSRMFFTELsTKDN 1094
                  66666666666666666666655555555555532224666666666666544443 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       7.5   1.4e+04      28      54 ..     326     352 ..     317     353 .. 0.65
   2 ?    2.6   0.1      0.11   2.1e+02      35      54 ..     420     439 ..     414     440 .. 0.87
   3 ?   -2.0   0.0       3.2   5.7e+03       4      54 ..     694     744 ..     692     745 .. 0.55
   4 !    8.1   0.1    0.0021       3.7       3      54 ..     966    1014 ..     964    1015 .. 0.78
   5 ?    5.2   0.0     0.017        30      26      53 ..    1023    1050 ..    1020    1052 .. 0.85
   6 ?   -2.0   0.0       3.2   5.8e+03      20      40 ..    1112    1133 ..    1106    1139 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 7.5
     HEAT_EZ  28 eilpaLlalLnddsdeVRaaAagaLgn 54 
                 + + +L++ L ++s + R+a +  +gn
  KHJ31727.1 326 KQMTLLAKQLDSESYSLRCALIEVCGN 352
                 557788888866555888887666666 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.11
     HEAT_EZ  35 alLnddsdeVRaaAagaLgn 54 
                 + L+d+s++VR +A+  L+ 
  KHJ31727.1 420 KSLEDKSSNVRRNAIKLLRT 439
                 679***********999975 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 3.2
     HEAT_EZ   4 RraAawaLGrlaggepel....lqplvpeilpaLlalLnddsd.eVRaaAagaLgn 54 
                 Rr+ +  LG la+  pe     +++++   l  L+      sd    +++++aL +
  KHJ31727.1 694 RRGSIIILGMLAVAKPEIvvgeMETMLRIGLGNLG-----RSDfQLAKYTCIALKR 744
                 66666677777766666633334444444444455.....6665556667777765 PP

  == domain 4  score: 8.1 bits;  conditional E-value: 0.0021
     HEAT_EZ    3 vRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeV.RaaAagaLgn 54  
                  +++aA ++L+      ++  + + +  lp+L+  L+ + d++ R +++ aLg 
  KHJ31727.1  966 LQAAATLCLA----KLMCVSSEYCETNLPLLITILERSRDPItRSNVVVALGD 1014
                  7888999994....55567777777899999999977777666********95 PP

  == domain 5  score: 5.2 bits;  conditional E-value: 0.017
     HEAT_EZ   26 vpeilpaLlalLnddsdeVRaaAagaLg 53  
                  ++e  ++L ++Lnd++++V+ +++ +L+
  KHJ31727.1 1023 IDENTDFLYRRLNDKDSSVKRTCLMTLT 1050
                  667778999**************99997 PP

  == domain 6  score: -2.0 bits;  conditional E-value: 3.2
     HEAT_EZ   20 ellqplvpeilpaLlalL.ndd 40  
                  el ++++ +il++L+++  +d+
  KHJ31727.1 1112 ELEEDALRRILKFLASFIeKDK 1133
                  666788999*****98884444 PP

>> DUF573  Protein of unknown function, DUF573
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.2     0.001       1.9      21      77 ..     360     421 ..     352     439 .. 0.78
   2 ?    1.2   0.0      0.34   6.1e+02      28      57 ..    1114    1143 ..    1100    1147 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.001
      DUF573  21 ksktgtspksdldafyeavksslss.....dvsksqlseKlrrLkkkyrnavskikkgkdps 77 
                 ++++g + ks+++af+e +++++ +     + ++ q++ Kl +L +k+ + ++k+++ + +s
  KHJ31727.1 360 QEERGDNYKSQMNAFFEVLEDRFLDinpycRCRTIQVYIKLCELEQKFPKRRQKAAELSTKS 421
                 677888867*************998888888888***************9999865322222 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.34
      DUF573   28 pksdldafyeavksslssdvsksqlseKlr 57  
                   ++ l+ + ++++s ++ d+  +ql++Kl 
  KHJ31727.1 1114 EEDALRRILKFLASFIEKDKHAKQLADKLA 1143
                  24788999999*****************85 PP

>> p450  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1       1.4   2.5e+03     145     249 ..     342     444 ..     308     477 .. 0.60
   2 ?   12.6   0.4   2.4e-05     0.042      99     234 ..    1005    1139 ..     947    1178 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHHHSSHHHTTTSSHHHHHHHHHHHHHHHHHCHHHHCCCCCH....HHTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCHCHCSCSSC CS
        p450 145 lskaaldvigsilFgarfdlledeklselvkaveelssllskssvqllllfp....llkylptkllrklkeavkklkdlldklieerretldsakksrr 239
                 l +a ++v+g+++   + +   +e+  +++ ++++ +++l+ ++ +++ + +     + + + +l++k+ + ++k+++l  k +e++ ++++++     
  KHJ31727.1 342 LRCALIEVCGNLIADLSRQ---EERGDNYKSQMNAFFEVLEDRFLDINPYCRcrtiQVYIKLCELEQKFPKRRQKAAELSTKSLEDKSSNVRRN---AI 434
                 5566666666666666533...333334666666666666554444333333211112233445666666666666666666666666666665...55 PP

                 SHHHHHHHHC CS
        p450 240 dfldalllak 249
                 ++l  l++++
  KHJ31727.1 435 KLLRTLIKTH 444
                 5555555555 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 2.4e-05
                  HHHHHHHHTSHSTTTHHHHHHHHHHHHHHHHHCCCCHCS.EEETHHHHHHHHHHHHHHHHHSSHHHTTTSSHHHHHHHHHHHHHHHHHCHHHHCCCC CS
        p450   99 Rrfltptltsfgklsleelveeeaedlveklrkkagess.elditellskaaldvigsilFgarfdlledeklselvkaveelssllskssvqllll 194 
                  R+ ++ +l +  +  ++ l++e ++ l+++l++k ++ + ++ +t  +   a  v  +  +g+  ++lede ++++ ++ ++ +++ls++   ++++
  KHJ31727.1 1005 RSNVVVALGDM-AVCFNHLIDENTDFLYRRLNDKDSSVKrTCLMTLTFLILAGQVKVKGQLGEMAKCLEDE-DKRIADLSRMFFTELSTKDNAIYNH 1099
                  55555556655.55689999************999999864444444444455566667789999999999.67*********************** PP

                  CHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCHCHC CS
        p450  195 fpllkylptkllrklkeavkklkdlldklieerretldsa 234 
                  f +++ l++ +++  ++a +++ ++l  +ie+ ++  + a
  KHJ31727.1 1100 FIDMFSLLSAQKELEEDALRRILKFLASFIEKDKHAKQLA 1139
                  **999***************************99888777 PP

>> ENTH  ENTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       2.7   4.9e+03      96     119 ..     417     440 ..     402     444 .. 0.75
   2 ?    0.9   0.0      0.25   4.4e+02      17      62 ..     647     692 ..     639     715 .. 0.91
   3 ?   -1.3   0.0       1.2   2.2e+03       8      41 ..     776     811 ..     771     826 .. 0.77
   4 ?    8.3   0.1    0.0012       2.2      41     124 ..    1027    1112 ..    1015    1113 .. 0.79
   5 ?   -3.0   0.0       4.1   7.4e+03      27      68 ..    1125    1167 ..    1120    1167 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2.7
                 -B-TTS-B-HHHHHHHHHHHHHHH CS
        ENTH  96 yideegkdeglniRkkakkiisll 119
                 ++ ++ +d+ +n+R+ a k++  l
  KHJ31727.1 417 LSTKSLEDKSSNVRRNAIKLLRTL 440
                 455667888899999998888765 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.25
                 SS--HHHHHHHHHHTTSHHHHHHHHHHHHHHHHH--GGGHHHHHHH CS
        ENTH  17 wGpsnkllteiarltyskkelseiisvitkrLqnnkgkewrsvlKa 62 
                  G++  +lt + +l  ++ +l+ i + +  +L + +g e r++ K+
  KHJ31727.1 647 FGATPAELTSLEQLLSNMMTLNHIPELVITKLWQVYGVERREISKS 692
                 699***************************9988888888888885 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 1.2
                 HHHHTSSSSS.S--HHHHHHHHHHTTSH.HHHHHHH CS
        ENTH   8 vreatnndpw.Gpsnkllteiarltysk.kelseii 41 
                 v+  t+n++w G+ ++ ++ i  l+ +  + +s+i+
  KHJ31727.1 776 VEIETDNKEWyGVAEQAISAIYTLSKHPdTLCSDIL 811
                 66679999999****999999999988855666664 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.0012
                  HHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHS-H.......HHHHHHHHTHHHHHGGGG---B-TTS-B-HHHHHHHHHHHHHHHT-HHH CS
        ENTH   41 isvitkrLqnnkgkewrsvlKaLtlieYLlknGse.......qvidwlkenisiiktlsefkyideegkdeglniRkkakkiislledeer 124 
                  ++ +++rL n+k++++++   +L  + +L+  G++       ++ ++l+++ + i  ls++ +++ + kd+   i +   +  sll+++++
  KHJ31727.1 1027 TDFLYRRL-NDKDSSVKRT--CLMTLTFLILAGQVkvkgqlgEMAKCLEDEDKRIADLSRMFFTELSTKDN--AIYNHFIDMFSLLSAQKE 1112
                  678999*9.8887777775..8*************888888888899999999999998885555577776..777777777777777665 PP

  == domain 5  score: -3.0 bits;  conditional E-value: 4.1
                  HHHHTTSHHHHHHHHHHHHHHHHH.--GGGHHHHHHHHHHHHH CS
        ENTH   27 iarltyskkelseiisvitkrLqn.nkgkewrsvlKaLtlieY 68  
                  +a+   + k+ ++  + +  rL + +++++w+ v   L l+++
  KHJ31727.1 1125 LASFIEKDKHAKQLADKLAARLPRcETERQWNDVTYVLSLLHH 1167
                  5666667799999999999999667999999999888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       854  (0.0476323); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.78u 0.28s 00:00:01.06 Elapsed: 00:00:00.42
# Mc/sec: 8442.59
//
Query:       KHJ31728.1  [L=440]
Description: putative protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-43  147.9   0.0      2e-40  138.8   0.0    2.8  2  Pkinase         Protein kinase domain
    2.7e-14   53.1   0.0    9.3e-09   34.9   0.0    3.7  4  Pkinase_Tyr     Protein tyrosine kinase
    0.00012   22.1   0.0      0.016   15.2   0.0    2.4  2  APH             Phosphotransferase enzyme family
     0.0026   16.6   0.0     0.0045   15.8   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase
     0.0035   16.7   0.0        1.9    7.7   0.0    2.3  2  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.052   13.2   0.1       0.42   10.2   0.0    2.1  2  FTA2            Kinetochore Sim4 complex subunit FTA2


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0027       8.1       2      19 ..      61      78 ..      60      85 .. 0.85
   2 !  138.8   0.0   6.9e-44     2e-40      25     264 .]     121     430 ..     116     430 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0027
                EEEEEEEEESSEEEEEEE CS
     Pkinase  2 ekleklGeGsfGkVykav 19
                + ++++GeG+f++Vyka 
  KHJ31728.1 61 RLINRIGEGTFSTVYKAQ 78
                56789***********97 PP

  == domain 2  score: 138.8 bits;  conditional E-value: 6.9e-44
                 EEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHTTEE-S CS
     Pkinase  25 kivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgslseeeakkiakqilegleylHskgiiHr 122
                 k vA+Kki + +  +    ++l+E+++l+ l+ +++++ l+ +f+++d+++ vl y +++++ ++ ++   ++  +++ ++++++++l+ +H+k+iiHr
  KHJ31728.1 121 KFVAIKKIYVTSSPS----RILNELELLADLRdCKFVCPLITAFRHTDQVVAVLPYFRHTDFRNYFRE---MTIPDMQIYFRSLFTALDIVHKKQIIHR 212
                 679999999987665....789**********9*********************************85...88889999******************** PP

                 S-SGGGEEEE.TTTEEEE-SGTTSEESSSSCS......................................BCTTTSCGGGS-HHHH.TTSCBSHHHHHH CS
     Pkinase 123 DlKpeNiLid.ekgelKitDFGlakelesssk......................................ltsfvgtseYlAPEvl.keneyskkvDvW 181
                 D+Kp N+L++ ek++  ++DFGla++  ++sk                                        ++ gt+ ++APEvl k ++ ++k+D+W
  KHJ31728.1 213 DIKPTNFLYEpEKKQGVLVDFGLAEREGTDSKpclcaespierrrriaqsitastgytngylkndprpsrRANRAGTRGFRAPEVLlKCTNQTTKIDIW 311
                 **********99999***********9999999************************************999**************999999******* PP

                 HHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS............................................... CS
     Pkinase 182 slGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeasei............................................... 233
                 s+Gvil+++l+++ pf ++ ++ ++  e+++      i+g +++k+     +                                               
  KHJ31728.1 312 SAGVILLTILSRRFPFFNSADDVEAMIEITT------IFGSKRMKY-----Callhgtvfqtniptigsqgfslekiilwstcrnhsvagrqevpltte 399
                 *****************66665544444444......444322222.....11122234455566777889**************************77 PP

                 -HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 234 seeakdllkkllkkdpkkRltaeellqhpyl 264
                 +  a ++l+k+l+ dpkkR++aee+l+h++l
  KHJ31728.1 400 ELLAVNFLEKCLELDPKKRFSAEEALKHEFL 430
                 777899**********************996 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.024        72       2      19 ..      61      78 ..      60      89 .. 0.86
   2 !   34.9   0.0   3.1e-12   9.3e-09      31     155 ..     123     241 ..     109     253 .. 0.88
   3 !   10.4   0.0   9.7e-05      0.29     163     201 ..     284     323 ..     269     354 .. 0.75
   4 ?   -0.9   0.0      0.27   8.1e+02     235     254 ..     404     423 ..     377     427 .. 0.74

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.024
                 EEEEEEEEESSEEEEEEE CS
  Pkinase_Tyr  2 elgkklGeGafGkVvegt 19
                 +l +++GeG+f++V++++
   KHJ31728.1 61 RLINRIGEGTFSTVYKAQ 78
                 57889***********97 PP

  == domain 2  score: 34.9 bits;  conditional E-value: 3.1e-12
                  EEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEES CS
  Pkinase_Tyr  31 VavKtlkeeateeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHr 127
                  Va+K++  +++    +++l+e++++ +l + + +  l+ +  ++++++ v+ y ++ d++++ r+      t+ d+  +   +  +++ +++k+++Hr
   KHJ31728.1 123 VAIKKIYVTSS---PSRILNELELLADLrDCKFVCPLITAFRHTDQVVAVLPYFRHTDFRNYFREM-----TIPDMQIYFRSLFTALDIVHKKQIIHR 212
                  89999944444...569***********99999******************************997.....999999999****************** PP

                  T-SGGGEEEEE.TTEEEE-STTTHEETTT CS
  Pkinase_Tyr 128 dlaarNvLlse.nkvvkisDfGLardiek 155
                  d+   N L +  +k+  + DfGLa++  +
   KHJ31728.1 213 DIKPTNFLYEPeKKQGVLVDFGLAEREGT 241
                  *********9625577889*****97644 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 9.7e-05
                  TSSTSGGGGS-HHHHHHSE.EEHHHHHHHHHHHHHHHHTT CS
  Pkinase_Tyr 163 eeaklpvkWmapEslkekk.ftsksDvWsfGvllwEiftl 201
                   ++     + apE+l +++  t+k D+Ws Gv+l  i++ 
   KHJ31728.1 284 ANRAGTRGFRAPEVLLKCTnQTTKIDIWSAGVILLTILSR 323
                  5555566688****998875899***********999984 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 0.27
                  HHHHHHHT-SSGGGS--HHH CS
  Pkinase_Tyr 235 yelmkkcweedpeeRptfse 254
                   ++++kc+e dp++R + +e
   KHJ31728.1 404 VNFLEKCLELDPKKRFSAEE 423
                  46799**********88765 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.4   0.0      0.01        30      27      80 ..     128     176 ..     117     193 .. 0.76
   2 !   15.2   0.0   5.3e-06     0.016     165     196 ..     206     236 ..     193     238 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.01
                 EE-TTS-HHHHHHHHHHHHHHHHTT-B--B-CTTB.S-EEETTEEEEEEE----E CS
         APH  27 rnpparaaeeirrevallrlLakagvpvPevlagd.tddeeigllfalieyvpgr 80 
                 ++ ++ ++ +i +e++ll+ L++ ++ +P + a++ td+      +a+++y   +
  KHJ31728.1 128 IYVTS-SPSRILNELELLADLRDCKFVCPLITAFRhTDQV-----VAVLPYFRHT 176
                 55566.78899********************998644444.....4444444444 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 5.3e-06
                 -EEEE-SS-SGGGEEEC...TTEEEEE---TT- CS
         APH 165 ptvllHgDlhpgNllvd.pddgrvtGviDfeda 196
                 +++++H+D++p N+l + + ++ v  ++Df++a
  KHJ31728.1 206 KKQIIHRDIKPTNFLYEpEKKQGV--LVDFGLA 236
                 68***************6555556..9***998 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.5e-06    0.0045     319     388 ..     201     300 ..     192     321 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.5e-06
  Pkinase_fungal 319 hrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddsses..gare...................................rtG 376
                     +   + k++i+HrDi   N l       ++++g+L+D+ la  +++ds+    +  e                                   r G
      KHJ31728.1 201 LDIVH-KKQIIHRDIKPTNFLYE----PEKKQGVLVDFGLAEREGTDSKPClcA--EspierrrriaqsitastgytngylkndprpsrranRAG 288
                     55556.9************9877....56779*************876665440..145556667777788888888888888888888888999 PP

  Pkinase_fungal 377 TleFmaievlkg 388
                     T+ F a evl +
      KHJ31728.1 289 TRGFRAPEVLLK 300
                     999999999986 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0014       4.2     160     195 ..     204     240 ..     192     254 .. 0.78
   2 !    7.7   0.0   0.00064       1.9     224     256 ..     301     333 ..     280     356 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0014
  Kinase-like 160 Lqakglvhgkftvdnllldekgg.lmlggftaLvrag 195
                   ++k+++h +++++n+l++++ +  +l +f+   r g
   KHJ31728.1 204 VHKKQIIHRDIKPTNFLYEPEKKqGVLVDFGLAEREG 240
                  5899**************9864313455666555555 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00064
  Kinase-like 224 ktkmthkldaWqlGlviyriwclklPltlatee 256
                   t+ t k+d W  G+  + i ++  P+ + +++
   KHJ31728.1 301 CTNQTTKIDIWSAGVILLTILSRRFPFFNSADD 333
                  5899**********************9776655 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.15   4.6e+02      19      42 ..      52      78 ..      42      80 .. 0.79
   2 ?   10.2   0.0   0.00014      0.42     177     213 ..     193     235 ..     184     237 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.15
        FTA2 19 sae...kdiefleyLgkglhsiVlkvk 42
                s e   +++++++ +g+g+ s V+k++
  KHJ31728.1 52 SFEgmkNQFRLINRIGEGTFSTVYKAQ 78
                444445799***************985 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00014
        FTA2 177 qlpkllrdlkklhklgIvvrDlkeenyi......dgkLvDlsa 213
                 +++ l   l+++hk  I++rD+k+ n++      +g+LvD++ 
  KHJ31728.1 193 YFRSLFTALDIVHKKQIIHRDIKPTNFLyepekkQGVLVDFGL 235
                 57889999******************98666666899999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3171.99
//
Query:       KHJ31729.1  [L=855]
Description: putative chitin synthase activator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-18   65.8  16.7    8.7e-07   29.4   0.4    6.8  7  Sel1      Sel1 repeat
    7.7e-06   25.5   0.4      4e-05   23.3   0.1    2.4  2  TPR_1     Tetratricopeptide repeat
    5.7e-05   22.9   4.7    7.6e-05   22.5   0.2    3.1  3  TPR_2     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.015   16.1   0.1       0.08   13.8   0.0    2.3  2  TPR_14    Tetratricopeptide repeat
       0.17   12.2   0.0       0.17   12.2   0.0    2.3  3  TPR_8     Tetratricopeptide repeat
       0.32   11.7   1.9        1.6    9.5   0.1    3.2  3  TPR_6     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.3   3.2e-05     0.095       8      37 ..     227     255 ..     222     256 .. 0.92
   2 ?    2.8   0.1     0.068     2e+02       2      33 ..     258     283 ..     257     288 .. 0.73
   3 !   16.4   0.0   3.7e-06     0.011       1      35 [.     289     322 ..     289     322 .. 0.94
   4 ?    1.4   0.0      0.19   5.7e+02      21      37 ..     352     371 ..     329     372 .. 0.71
   5 ?   -1.5   0.0       1.6   4.7e+03       1      14 [.     373     384 ..     373     400 .. 0.82
   6 !    8.2   0.3    0.0014       4.2       2      36 ..     409     445 ..     408     446 .. 0.88
   7 !   29.4   0.4   2.9e-10   8.7e-07       2      38 .]     449     483 ..     448     483 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.2e-05
        Sel1   8 GmfylylnGl.gvpkDpekAiewyekAAeqG 37 
                 +  y+ ++G+ g p+D+++ + +y +AAe+G
  KHJ31729.1 227 A--YWAEFGKfGYPRDQRESFLCYTRAAEKG 255
                 5..77799**88*****************99 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.068
        Sel1   2 eAmyrLGmfylylnGlgvpkDpekAiewyekA 33 
                  A yr G  +  ++      +  kA+e+y++ 
  KHJ31729.1 258 RAHYRIG--M--QYEN--SGNLTKALEHYRRG 283
                 6889999..4..4443..46999999999996 PP

  == domain 3  score: 16.4 bits;  conditional E-value: 3.7e-06
        Sel1   1 aeAmyrLGmfylylnGl.gvpkDpekAiewyekAAe 35 
                 +++ yrLGm+   l G+ g+p D  +A+ +++ AAe
  KHJ31729.1 289 SASHYRLGMMT--LLGQhGTPVDCTRAVNLLRFAAE 322
                 6799****888..****99**************997 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.19
        Sel1  21 k...DpekAiewyekAAeqG 37 
                     ++++A++  ekAA +G
  KHJ31729.1 352 YlpfNIREARKNIEKAAYLG 371
                 14468999*********998 PP

  == domain 5  score: -1.5 bits;  conditional E-value: 1.6
        Sel1   1 aeAmyrLGmfylyl 14 
                 + A+ ++G+ y  +
  KHJ31729.1 373 SKAQVKMGLAY--E 384
                 57999999555..3 PP

  == domain 6  score: 8.2 bits;  conditional E-value: 0.0014
        Sel1   2 eAmyrLGmfylylnGl.g.vpkDpekAiewyekAAeq 36 
                 eA+++++   ++l G  +  +kD+++A+ + ++AA++
  KHJ31729.1 409 EAAADMAVSKWFLCGYeDlFEKDEKLAFIHAQRAASN 445
                 7899999999999999965778*************85 PP

  == domain 7  score: 29.4 bits;  conditional E-value: 2.9e-10
        Sel1   2 eAmyrLGmfylylnGlgvpkDpekAiewyekAAeqGd 38 
                  A +++G  y+y+ G  v+ D ++ ++wy+kAAe+G+
  KHJ31729.1 449 MAEFAMG--YFYEIGMYVKSDLRESERWYQKAAEHGN 483
                 799****..777***99*******************7 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.1   1.3e-08     4e-05       1      30 [.     257     286 ..     257     289 .. 0.94
   2 ?   -1.9   0.0       1.2   3.6e+03      16      29 ..     467     480 ..     465     481 .. 0.74

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 1.3e-08
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALel 30 
                 a+a+y++G+ y + g++ +Ale+y++ + l
  KHJ31729.1 257 ARAHYRIGMQYENSGNLTKALEHYRRGVAL 286
                 89************************9887 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.2
                 -HHHHHHHHHHHHH CS
       TPR_1  16 kydeAleyyekALe 29 
                 ++ e +  y+kA e
  KHJ31729.1 467 DLRESERWYQKAAE 480
                 56777888999966 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.2   2.5e-08   7.6e-05       1      31 [.     257     287 ..     257     290 .. 0.94
   2 ?   -2.0   0.2       1.8   5.4e+03      17      28 ..     357     368 ..     356     370 .. 0.76
   3 ?    0.6   0.0      0.28   8.3e+02      16      29 ..     467     480 ..     462     482 .. 0.82

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 2.5e-08
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleld 31 
                 a+a+y++G+ y+++g++ +Ale++++ ++l 
  KHJ31729.1 257 ARAHYRIGMQYENSGNLTKALEHYRRGVALQ 287
                 78************************99986 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.8
       TPR_2  17 yeeAleafekAl 28 
                   eA++  ekA 
  KHJ31729.1 357 IREARKNIEKAA 368
                 568999999986 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.28
       TPR_2  16 dyeeAleafekAle 29 
                 d+ e +++++kA e
  KHJ31729.1 467 DLRESERWYQKAAE 480
                 77899999999987 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   2.7e-05      0.08       2      35 ..     258     291 ..     257     300 .. 0.83
   2 ?   -2.9   0.0         6   1.8e+04      16      30 ..     467     481 ..     462     487 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.7e-05
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPdda 35 
                 +a+++++  ++++G++ +A++++rr +al+ +  
  KHJ31729.1 258 RAHYRIGMQYENSGNLTKALEHYRRGVALQDSAS 291
                 799***********************99876555 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 6
      TPR_14  16 dpdeAiallrralal 30 
                 d++e+++ +++a ++
  KHJ31729.1 467 DLRESERWYQKAAEH 481
                 678999999999765 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   5.8e-05      0.17       1      30 [.     257     286 ..     257     289 .. 0.92
   2 ?   -3.0   0.1       4.1   1.2e+04      17      29 ..     357     369 ..     356     370 .. 0.78
   3 ?   -3.3   0.1       5.1   1.5e+04      16      28 ..     467     479 ..     466     480 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.8e-05
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekalel 30 
                 a+a+y++g+ y++ g++ +A e y++ + l
  KHJ31729.1 257 ARAHYRIGMQYENSGNLTKALEHYRRGVAL 286
                 79***********************98876 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 4.1
                 HHHHHHHHHHHHH CS
       TPR_8  17 yeeAkeyyekale 29 
                 + eA + +eka +
  KHJ31729.1 357 IREARKNIEKAAY 369
                 5699999999976 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 5.1
                 -HHHHHHHHHHHH CS
       TPR_8  16 dyeeAkeyyekal 28 
                 d+ e++ +y+ka 
  KHJ31729.1 467 DLRESERWYQKAA 479
                 5667888888885 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0         2   6.1e+03      21      30 ..     104     113 ..     103     113 .. 0.90
   2 ?    9.5   0.1   0.00054       1.6       2      25 ..     259     282 ..     258     282 .. 0.93
   3 ?   -1.1   0.0       1.3   3.8e+03       2      12 ..     375     385 ..     374     406 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2
                 HHHHHHHHH- CS
       TPR_6  21 ealerlikeY 30 
                 ++++++i++Y
  KHJ31729.1 104 AIYQSIIDNY 113
                 69*******9 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00054
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAlealer 25 
                 A y++++ y++ g+ +kAle ++r
  KHJ31729.1 259 AHYRIGMQYENSGNLTKALEHYRR 282
                 89*********77*******9997 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1.3
                 HHHHHHHHHHH CS
       TPR_6   2 Alyklalsyrk 12 
                 A+ k++l+y+ 
  KHJ31729.1 375 AQVKMGLAYEL 385
                 899******86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (855 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.40
# Mc/sec: 6435.12
//
Query:       KHJ31730.1  [L=292]
Description: putative mitochondrial genome maintenance protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-89  295.5   0.0    1.1e-88  295.1   0.0    1.1  1  Mgm101p   Mitochondrial genome maintenance MGM101


Domain annotation for each model (and alignments):
>> Mgm101p  Mitochondrial genome maintenance MGM101
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  295.1   0.0   6.2e-93   1.1e-88       1     170 []     121     290 ..     121     290 .. 1.00

  Alignments for each domain:
  == domain 1  score: 295.1 bits;  conditional E-value: 6.2e-93
     Mgm101p   1 dweesfkglskkpfskeaadvllapleeedveikpdGllYlpeikYrriLnkafGpggWglaprgetvvtekivtreyaLvvegrlvsearGeqeyfee 99 
                 dw++sf+gls++pfskeaa++l+apl+ +d+e+kpdG+lYlpeikYrriLnkafGpggWglaprget+vt k++treyaL+++grlvs+arGeq+yf++
  KHJ31730.1 121 DWTRSFHGLSSQPFSKEAAEILMAPLDLDDIEVKPDGILYLPEIKYRRILNKAFGPGGWGLAPRGETIVTGKSITREYALLAHGRLVSVARGEQDYFSP 219
                 8************************************************************************************************** PP

     Mgm101p 100 esiptategcksnalmRcCkDlGiaseLWdPefirkfkkkkaeevwvehvttkkkkklwkrkdeeveyPyk 170
                 e+iptategcksnalmRcCkDlG+aseLWdP++irkf k +a++vw+ehv+tkkkk++w rkd+ev+yPyk
  KHJ31730.1 220 EGIPTATEGCKSNALMRCCKDLGVASELWDPRYIRKFMKANARQVWAEHVVTKKKKQVWIRKDDEVRYPYK 290
                 **********************************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2102.43
//
Query:       KHJ31731.1  [L=354]
Description: putative hva22 family tb2 dp1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.1e-23   82.1   9.1    3.6e-23   81.3   9.1    1.4  1  TB2_DP1_HVA22  TB2/DP1, HVA22 family


Domain annotation for each model (and alignments):
>> TB2_DP1_HVA22  TB2/DP1, HVA22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.3   9.1     2e-27   3.6e-23       1      77 []      18      94 ..      18      94 .. 0.96

  Alignments for each domain:
  == domain 1  score: 81.3 bits;  conditional E-value: 2e-27
  TB2_DP1_HVA22  1 PayaslkaleskeksdetkwltYWvvfafltvvesladvllswiPfYylfKllfllwlvlpqtqgatyvYekflrpl 77
                   P++as+kal++++ s  t wl+YWvv+a+ +++es++ ++l wiPfY++++l+fll+l+lpqtqga ++Y ++++p+
     KHJ31731.1 18 PVFASYKALKTSDPSLLTPWLMYWVVLACALFIESWTTFILCWIPFYSWIRLCFLLYLILPQTQGANVLYISHVHPF 94
                   99*******9988885668********************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       620  (0.0345808); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2516.12
//
Query:       KHJ31732.1  [L=81]
Description: putative cytochrome oxidase assembly factor 4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-06   27.7   8.3    3.5e-06   27.0   8.3    1.4  1  CHCH      CHCH domain
  ------ inclusion threshold ------
      0.045   13.8   8.8       0.74    9.9   8.8    2.0  1  Cmc1      Cytochrome c oxidase biogenesis protein Cmc1 like
       0.12   12.4   3.3       0.66   10.0   0.4    2.2  2  CX9C      CHCH-CHCH-like Cx9C, IMS import disulfide relay-sys


Domain annotation for each model (and alignments):
>> CHCH  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   8.3   5.8e-10   3.5e-06       1      35 []      33      66 ..      33      66 .. 0.98

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 5.8e-10
                THHHHHHHHHHHHHCTSSTTTTHHHHHHHHHHHCC CS
        CHCH  1 CgeefkeylkClkdnsdefskCrkefeafkeCvkk 35
                C+ e +++ +C++++ d +++C++e++ fkeC+kk
  KHJ31732.1 33 CAAENTKMNDCFYEKKD-WRLCKDELKLFKECWKK 66
                9****************.***************97 PP

>> Cmc1  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   8.8   0.00012      0.74       4      58 ..      23      75 ..      22      81 .] 0.83

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00012
        Cmc1  4 klkkkar.keCaelikalaeChkdrllkvvgkCneekeamkkClkeyrtderlkda 58
                +++k+ +   Ca++ +++ +C  +  +k    C++e + +k+C k+ ++der+ + 
  KHJ31732.1 23 DWDKRIFsTGCAAENTKMNDCFYE--KKDWRLCKDELKLFKECWKKNKNDERT-ST 75
                6888999889************96..455567*******************99.44 PP

>> CX9C  CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.5    0.0062        37      18      39 ..      33      53 ..      31      53 .. 0.78
   2 ?   10.0   0.4   0.00011      0.66       7      26 ..      52      71 ..      50      75 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0062
        CX9C 18 CvssnqswpekCkeqkkeLakC 39
                C + n ++ ++C  +kk+ + C
  KHJ31732.1 33 CAAEN-TKMNDCFYEKKDWRLC 53
                77777.7788899999987777 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00011
        CX9C  7 yCpkefeaYhkCvssnqswp 26
                 C +e++ +  C  +n++++
  KHJ31732.1 52 LCKDELKLFKECWKKNKNDE 71
                6***************8875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       884  (0.0493056); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 590.38
//
Query:       KHJ31733.1  [L=702]
Description: putative biotin apo-protein ligase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.3e-138  462.2   0.0   1.9e-138  461.7   0.0    1.3  1  BPL_N          Biotin-protein ligase, N terminal
    2.5e-22   79.2   0.2    4.2e-22   78.5   0.2    1.4  1  BPL_LplA_LipB  Biotin/lipoate A/B protein ligase family
    8.7e-08   32.0   0.0    1.9e-07   30.9   0.0    1.6  1  BPL_C          Biotin protein ligase C terminal domain


Domain annotation for each model (and alignments):
>> BPL_N  Biotin-protein ligase, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  461.7   0.0  3.2e-142  1.9e-138       2     377 .]       7     385 ..       6     385 .. 0.92

  Alignments for each domain:
  == domain 1  score: 461.7 bits;  conditional E-value: 3.2e-142
       BPL_N   2 nVLvYsGpgtskesvkhtletLrrlLspnYavqtvsakvllkePWastcallVlPgGaDlpYvrelngegnrkikeyVekGGkylGlCAGaYygskrve 100
                 +VL+YsG g+s+esv+h+l++LrrlL pnYav++v+++++l+ePW+++callV+PgGaD++Y+++lng+g r i++yV++GG+ylG+CAG+Y+gs+r+e
  KHJ31733.1   7 DVLIYSGLGSSAESVRHCLYSLRRLLVPNYAVISVTERTILREPWTKSCALLVFPGGADTGYCNSLNGDGFRIIDQYVRRGGAYLGFCAGGYFGSSRCE 105
                 8************************************************************************************************** PP

       BPL_N 101 fevgdkklevvgeReLaffpgtcrGlafkGFkYesekGaravklkvskealkaee.ekeefkiyynGggvFvdaeklknk.vevLArYaeeldvdsgea 197
                 fevg+++levvg+ReL+ffpgtcrG afkGF+Y+se+Ga+av+l + +    +++ ++ +f++yynGgg+Fvda+++++k +e+LA+Y+++ld+d+g++
  KHJ31733.1 106 FEVGNRSLEVVGPRELSFFPGTCRGSAFKGFEYNSEAGAKAVELIIPS----ESSlSPCKFNSYYNGGGAFVDAANFSDKgIEILAKYSDPLDIDGGDG 200
                 **********************************************43....2334899***************************************6 PP

       BPL_N 198 kkaAvvlckvgeGkalLtgvhpEfalanlkkqeaeekeykkvveeleadekaRleflkalLtklgLevneeeeetevpslsplllsslskeeveelles 296
                 + aAvv+ckv +Gk++Ltg+hpEf++ nl+++ ++ + y ++++ l++de+ R++flka+LtklgL+vn +e e ++p lspl+lss ++e ++ ll+s
  KHJ31733.1 201 N-AAVVYCKVNQGKVILTGPHPEFSALNLDPR-TKVSGYLELIRILTDDESLRVSFLKACLTKLGLTVN-QE-ELSNPPLSPLHLSSQKSELLSLLLSS 295
                 6.***************************999.6899********************************.44.3899**************9999**** PP

       BPL_N 297 lkeklaaekeeeeevikdendtfrleked.............eeeaeeaaeeeeee...........kedleevvkeilvvkeeeelpskkltplFdie 371
                 +++ +++++++++++i++e+dtf lek d             +            +           + d++ ++k+i v+++ +++p+ k+tp+F+++
  KHJ31733.1 296 WQN-IIITNDDGQKIIRGESDTFYLEKPDskyrhesmiknelQ------------SkqlenvgensdQLDHDPAIKYI-VLHR-SKWPDFKETPKFNHD 379
                 *99.677768899****************88877777654321............022233334444678999*****.6777.58************* PP

       BPL_N 372 aYfkeL 377
                 a++++L
  KHJ31733.1 380 AFYTSL 385
                 ***987 PP

>> BPL_LplA_LipB  Biotin/lipoate A/B protein ligase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.5   0.2     7e-26   4.2e-22       2     131 .]     406     554 ..     405     554 .. 0.97

  Alignments for each domain:
  == domain 1  score: 78.5 bits;  conditional E-value: 7e-26
                    EEEES-HHH.HHH..GCGGG--TT-EEEEEEESS-B....-B--B-TTSEEEEEEEEESS...-CCGTHHHHHHHHHHHHHHH......HHTT-TT CS
  BPL_LplA_LipB   2 gevikstnt.llkeslnsselesgglvvvrrqtgGr....nvwhspkgeltyslllspeqktfqnrvlelyvsllvlavlealgyrdskpgiegip 92 
                    + v++stnt l k+s+ +s+l++g++ ++++q++Gr    n+w+sp g l++s+ ++   +  +++++ ++++  ++a+++ +   ++++g+e+ +
     KHJ31733.1 406 ANVVTSTNTvLEKNSVLLSQLPTGFAFIATTQVAGRgrgsNLWVSPAGSLNFSVYIKHPLSLSTTAPVIFIQYIAAIAIVQGI--HSYEKGFEKLS 499
                    6899*****99999*******************************************99999999999999************..99********* PP

                    EEEETTTEEEE................TTEEEEEEEEEEEETTS-EEEEEEEEEE CS
  BPL_LplA_LipB  93 vfikwpnDlyv................ngrKlaGiavtstrgktlhhivigvgvn 131
                    v+ kwpnD+y+                 + K++Gi+++s  ++  +++++g+g+n
     KHJ31733.1 500 VKLKWPNDIYIrspsntntnendnslkSYVKIGGILINSSCSNDNFNLIVGIGLN 554
                    *****************************************************98 PP

>> BPL_C  Biotin protein ligase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.0   3.1e-11   1.9e-07       1      48 []     637     695 ..     637     695 .. 0.97

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 3.1e-11
                 STTSEEEEEETSCEEEEEEEEE.-TTSEEEEEETTE............EEEESSCCEEEE CS
       BPL_C   1 hsGqeVtlededgkveGiavGI.dddGaLllktddg...........lqpdinsGdislr 48 
                 h +q+Vtle+  g ++++++GI +d G+L +++++g           lq d ns+d++++
  KHJ31733.1 637 HTNQIVTLES-EGCTRARIKGItSDWGFLKVEELSGhedrptgkvltLQSDCNSFDFFKG 695
                 679*******.8**********************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (702 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       302  (0.0168442); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.25s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 4642.40
//
Query:       KHJ31734.1  [L=231]
Description: hypothetical protein EV44_g3410 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1755.46
//
Query:       KHJ31735.1  [L=470]
Description: putative squalene synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-35  121.4   0.0    6.1e-35  121.0   0.0    1.2  1  SQS_PSY   Squalene/phytoene synthase


Domain annotation for each model (and alignments):
>> SQS_PSY  Squalene/phytoene synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.0   0.0   3.4e-39   6.1e-35       4     261 ..      52     328 ..      49     330 .. 0.89

  Alignments for each domain:
  == domain 1  score: 121.0 bits;  conditional E-value: 3.4e-39
                 H-HHHHHHHTTS-HHHHHHHHHHHHHHHHHT-.-----.........------------............---------THHHHHHHHHHHT.--HHH CS
     SQS_PSY   4 asksfylaslllppelRdalgalYafcreaddlvDdvseplqara.rldwwrdavdavya..........edklkpprepvlralaqlirtyk.lpkel 90 
                  s+sf  +++ l+pel  +++++Y+  r +d+++Dd + p ++++  l+ ++d + +  +          +++l  +++ v +++a   + y+ ++k++
  KHJ31735.1  52 TSRSFSSVIQELNPELLVPVTLFYLILRGLDTIEDDMTIPIEKKEpLLRNFHDVIGKKEWnfdgngplekDRELLVHFDVVTIEFALIKPVYQtIIKDI 150
                 69************************************87777777999****999888888887777654999************************* PP

                 HHHHHHHTS--SS-.......--SHHHHHHHHHHHHHHHHHHHHHHH-S.....S-H.HHHHHHHHHHHHHHHHHHHHT---SHHHHTT..S-HHHHHH CS
     SQS_PSY  91 lleliegmeadlef.....tryetlddLeeYcyrvagvVgelclrllgar....rsd.ralaeaarrlGkalQltnilRdvpeDaergrvyLPadvlke 179
                  +++ +gm+  + +     + + t++d+e Yc++vag Vg  ++rl+  +      +  +  ++ +++G++lQ tni+Rdv+eD + gr ++P++++  
  KHJ31735.1 151 TEKMGNGMADYALNseqnaNGINTIKDYELYCHYVAGLVGDGLTRLFVESglanP-AlLKRPHLTESMGQFLQKTNIIRDVREDFDDGRRFWPKEIWSN 248
                 ********999988666556699************************99766542.254457899********************************99 PP

                 HT--HHHHHHT-.-SHHHHHHHHHHHHHHHHHHHHHHHTGGGS.-HHHHHHHHHHHHHHHHHHHHHHHTTT-TTT------H CS
     SQS_PSY 180 fgvseedllrkgvrsaelrallrrlaerArelldearellkqlpdrrarpalllavalyrailerieaadydvlsrrvklsl 261
                 +  + edl++ + + +++ ++  +++ ++ ++ de+  +++ ++d+ +  +++++ a++ a+le + ++++ +l + vk+++
  KHJ31735.1 249 HVEKFEDLFKPN-NLQKALDCSSEMVMQSLRHADECLFYMAGIKDQSVFNFVAIPQAMAIATLELVFQNPKIFL-ENVKITK 328
                 999999**9887.5666************************************************999998544.6777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 3625.43
//
Query:       KHJ31736.1  [L=293]
Description: putative nad dependent epimerase dehydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-12   46.2   0.0    1.1e-11   44.4   0.0    1.7  2  RmlD_sub_bind    RmlD substrate binding domain
    3.1e-12   46.5   0.0    4.7e-12   45.9   0.0    1.3  1  Epimerase        NAD dependent epimerase/dehydratase family
    5.1e-05   22.5   0.0    0.00015   21.0   0.0    1.7  3  Polysacc_synt_2  Polysaccharide biosynthesis protein
    0.00028   20.4   0.0    0.00096   18.6   0.0    1.8  2  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase


Domain annotation for each model (and alignments):
>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.4   0.0   2.5e-15   1.1e-11       3     165 ..       7     176 ..       5     182 .. 0.84
   2 ?   -0.6   0.0      0.12   5.5e+02     203     266 ..     202     265 ..     187     288 .. 0.59

  Alignments for each domain:
  == domain 1  score: 44.4 bits;  conditional E-value: 2.5e-15
                    EEEESTTSHHHHHHHHHCTTTSEEEEEE-TTT--TTSHHHHHHHHHHH--SEEEE-----...-HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-E CS
  RmlD_sub_bind   3 ilvtGanGqlGseLakqlaeeglevlaltreeldltdaeavaellkeakpdvvvnaAAyt...avDkaEseeeaayavnaeavealAeaaaavgal 95 
                     l+ Ga+G ++ +L+ +l+++g ev+++   ++ ++++e+v++ l++ kp  v n+A  t   +vD +E+++e+  + n+ ++ +l++ +   +++
     KHJ31736.1   7 FLIWGAHGWIAGQLKTLLESQGKEVYGT---TVRMENRESVMAELDKYKPTHVLNVAGSTgrpNVDWCEDNKEETIRNNVIGTINLSDCCFLKKIH 99 
                    699*************************...77899**********************997778**************************877777 PP

                    EEEEEEG..GGS-S-...TTS-B-TTS----.SSHHHHHHHHHHHHHHHH-SSEEEEEE-SEESS..SSS-HHHHHHH CS
  RmlD_sub_bind  96 LihvStD..yVFdGe...kkrpYeeddetsP.lnvYGrtKlaGEqavlaagkkalivRtswvyge..kgknfvktmlr 165
                    +    t   yV+d         + e+d+ +   ++Y +tK++ E+  + +  ++li+R     ++  + +nfv+++ +
     KHJ31736.1 100 VTVFATGciYVYDHLhpiGGPGFLESDKANFdGSFYSETKAHVEEILK-NYSNTLILRLRMPVSDdlHPRNFVTKISK 176
                    66666643399998866533448888888761579*********9766.67788888887655544699999998865 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.12
                    .GGG-EEEE---BS-EEHHHHHHHHHHHHCHTT.SEEEEE-CCCS--SS---SBE-B--HHHHHC CS
  RmlD_sub_bind 203 ekelagvyHlanegetswlefArailkeagads.eevkpistaeyptpAkRPanSvLdtekleat 266
                    e++  gvy ++n g++s  e+     k ++ d   +    ++++   +A R  n +Ldt+kl ++
     KHJ31736.1 202 EHNEVGVYNFTNPGAISHNEVLSLFKKYVRPDFtWQNFSLEEESKVIKAGRS-NCKLDTNKLVNK 265
                    3445899999999999888765554444444433233334455556666663.567777776654 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.0     1e-15   4.7e-12       2     158 ..       8     151 ..       7     175 .. 0.84

  Alignments for each domain:
  == domain 1  score: 45.9 bits;  conditional E-value: 1e-15
                 EEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHCEEEE--TT-HHHHHHHHHHHT-SEEEE--S.--..-HHHHHHSHHHHHHHHTHHHHH CS
   Epimerase   2 lVtGatGfiGsalvkallekgyevigldrlssasntarledlelveldltdrsalerlfkeeqpdavihlAa.vg..gvaassedpadfieknlqgtln 97 
                 l+ Ga+G i  +l   l+++g ev g + +                  + +r+++ + +++++p++v+++A+  g  +v++  ++++++i++n++gt n
  KHJ31736.1   8 LIWGAHGWIAGQLKTLLESQGKEVYGTTVR------------------MENRESVMAELDKYKPTHVLNVAGsTGrpNVDWCEDNKEETIRNNVIGTIN 88 
                 899***************************..................999*******************996653368999***************** PP

                 HHHHHHHHTCTEEEEEEEGGGGTSCSSSS..BSTCSTTS--.--SSHHHHHHHHHHHHHHHHHH CS
   Epimerase  98 lleaarkagvkrllflsSsevYGkdaeqp..keettltgpl.kpnspYaaaKlageklveayaa 158
                 l ++++ +++  +  + + ++Y  d+  p      +++++     s Y+ +K+++e+++++y +
  KHJ31736.1  89 LSDCCFLKKI-HVTVFATGCIYVYDHLHPigGPGFLESDKAnFDGSFYSETKAHVEEILKNYSN 151
                 **********.6666667777776666555433444444445599****************975 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   3.4e-08   0.00015      61     124 ..      36     102 ..      18     106 .. 0.84
   2 ?   -3.1   0.0      0.73   3.3e+03     127     154 ..     124     151 ..     122     153 .. 0.83
   3 ?   -3.4   0.0      0.92   4.1e+03      22      41 ..     194     213 ..     189     223 .. 0.79

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 3.4e-08
                      --TT-HHHHHHHTT..T-SEEEE-----...-HHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-SEEE CS
  Polysacc_synt_2  61 gdvrdkerlekaleelkvdvvfhaAAlK...hVPlveenpleaiktNvlgtenvieaaieagvkkvv 124
                        ++++e++   l+++k+  v+++A      +V  +e n  e+i++Nv+gt n+ +++  ++++  v
       KHJ31736.1  36 VRMENRESVMAELDKYKPTHVLNVAGSTgrpNVDWCEDNKEETIRNNVIGTINLSDCCFLKKIHVTV 102
                      55789999999************998653338999***********************999988766 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.73
                      EEGGGSS--SHHHHHHHHHHHHHHHGGG CS
  Polysacc_synt_2 127 StDKAvnPtnvmGatKrlaekllqalak 154
                       +DKA    + +  tK+  e +l ++++
       KHJ31736.1 124 ESDKANFDGSFYSETKAHVEEILKNYSN 151
                      5799999999999999999999988766 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 0.92
                      B-SEEEEEES-HHHHHHHHH CS
  Polysacc_synt_2  22 kpkkiillerdElklyeiek 41 
                       p++i+l e++E+ +y++++
       KHJ31736.1 194 LPASILLAEHNEVGVYNFTN 213
                      57899999999999998765 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.08   3.6e+02       1      31 [.       8      38 ..       8      44 .. 0.87
   2 !   18.6   0.0   2.1e-07   0.00096      58     170 ..      35     152 ..      16     162 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.08
                   EEETTTSHHHHHHHHHHHHCT-CCEEEEEEE CS
  GDP_Man_Dehyd  1 LiTGiaGfiGsylaelLlekgyevhgivrrs 31
                   Li G  G i   l  lL ++g ev+g++ r 
     KHJ31736.1  8 LIWGAHGWIAGQLKTLLESQGKEVYGTTVRM 38
                   8999*********************987665 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 2.1e-07
                    E--TT-HHHHHHHHHHHT-SEEEE--S---...HHHHTTSHHHHHHHHTHHHHHHHHHHHHCT..TTSEEEEEEEGGGG-S-S...SSSB-TTS-- CS
  GDP_Man_Dehyd  58 kgDltDssslerllaevqpdevynLAAqsh...VdvsfekPeytaevnvlGtlrLLeairalglekkvrfyqaStsEvYGkvq...evpqtEttpf 147
                     + +++++s+   l++++p+ v+n A+      Vd   ++ e+t+++nv+Gt++L +++   ++  +v ++ ++   vY ++       + E+ + 
     KHJ31736.1  35 TVRMENRESVMAELDKYKPTHVLNVAGSTGrpnVDWCEDNKEETIRNNVIGTINLSDCCFLKKI--HVTVFATGCIYVYDHLHpigGPGFLESDKA 128
                    55678999999***************986444499999********************955433..466667777778888763323346777666 PP

                    -.--SHHHHHHHHHHHHHHHHHHH CS
  GDP_Man_Dehyd 148 y.PrsPYaaaKlyadwivvnyrea 170
                    +   s Y+ +K+  + i +ny ++
     KHJ31736.1 129 NfDGSFYSETKAHVEEILKNYSNT 152
                    53789****************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       591  (0.0329634); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2220.48
//
Query:       KHJ31737.1  [L=502]
Description: putative domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-77  258.8   4.5    3.1e-77  258.8   4.5    3.2  5  DnaJ-X    X-domain of DnaJ-containing
    3.3e-25   88.0   2.3    5.2e-25   87.4   0.7    2.3  2  DnaJ      DnaJ domain
  ------ inclusion threshold ------
      0.071   11.7   0.2       0.13   10.8   0.2    1.4  1  MutL      MutL protein


Domain annotation for each model (and alignments):
>> DnaJ-X  X-domain of DnaJ-containing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.54   3.2e+03      53      70 ..      49      66 ..      45      74 .. 0.80
   2 ?   -1.7   0.1      0.27   1.6e+03       7      45 ..     105     143 ..     102     150 .. 0.83
   3 ?   -1.7   0.4      0.26   1.6e+03     111     137 ..     227     253 ..     187     257 .. 0.60
   4 !  258.8   4.5   5.2e-81   3.1e-77       1     211 []     259     463 ..     259     463 .. 0.99
   5 ?   -3.6   3.0         1   6.3e+03     113     139 ..     470     492 ..     464     499 .. 0.41

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.54
      DnaJ-X 53 htIGkiYknkAksflksk 70
                ++IG+ Y+  +++ l ++
  KHJ31737.1 49 QAIGEAYQVLSNAELRKQ 66
                689999999999999885 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.27
      DnaJ-X   7 eLakkLrekLspyveadkkeetesFkkkleeeaesLkme 45 
                  L k L++ +++ + ++++e++e F  +   ++esLk+e
  KHJ31737.1 105 SLMKDLTRTIDITMSEESEEDKEVFPGEDVAKVESLKEE 143
                 577888888888888877779999999999999999987 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.26
      DnaJ-X 111 akeqekkkeeekeeeeeteeelaemek 137
                 +++q kk++++   ++ + +ela +ek
  KHJ31737.1 227 ERNQRKKEKKKGGLSKTKRDELAAYEK 253
                 333333344455555666666666665 PP

  == domain 4  score: 258.8 bits;  conditional E-value: 5.2e-81
      DnaJ-X   1 qeereeeLakkLrekLspyveadkke.etesFkkkleeeaesLkmesFGleilhtIGkiYknkAksflkskqkflglgglfssvkekgrvvkdtfktvs 98 
                 ++er+e+La+kL+++Ls+++e++k+  +t++F++k + e+e+LkmesFGl+ilh+IG +Y +k++++lks qkflg+gg+fs++k+kg+ +k+t++t+s
  KHJ31737.1 259 RQERVETLARKLIDRLSILTETNKDPeVTKAFQEKARLEVENLKMESFGLDILHAIGATYVQKGTALLKS-QKFLGIGGFFSKLKDKGTLAKETWNTIS 356
                 689*******************99778*******************************************.**************************** PP

      DnaJ-X  99 saldaqstmeelakeqekkkeeekeeeeeteeelaemekkllgkvLaaawkgskfeIestlrevcdkvLkDksvdketrlkRAeaLkilGeifqkakrt 197
                 sa+daq t+ee+ak+++k+       ee+t+e++ e+e+k++gk+L aaw+gskfeI+++lr+vcd+vL+Dk+v+ ++r++RA+aL + Geifqka+r+
  KHJ31737.1 357 SAIDAQITIEEMAKMEQKG------GEEWTDEKKVEYERKVTGKILTAAWRGSKFEIQGVLRDVCDEVLNDKKVPMSKRIERAHALVLCGEIFQKAQRN 449
                 *******************......************************************************************************** PP

      DnaJ-X 198 ekeeeearvfeelv 211
                 ++ee +  +fe+lv
  KHJ31737.1 450 PEEEGDYMAFEQLV 463
                 ****99999**997 PP

  == domain 5  score: -3.6 bits;  conditional E-value: 1
      DnaJ-X 113 eqekkkeeekeeeeeteeelaemekkl 139
                 ++ kk    k++e++t++++ ++ +++
  KHJ31737.1 470 KESKK----KSKEKDTKNNQVNETQET 492
                 22222....333444444444444433 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.4   0.7   8.7e-29   5.2e-25       2      63 .]       7      68 ..       6      68 .. 0.99
   2 ?   -2.6   0.0       1.1   6.3e+03      35      45 ..     282     292 ..     276     295 .. 0.56

  Alignments for each domain:
  == domain 1  score: 87.4 bits;  conditional E-value: 8.7e-29
                HHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  2 yYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63
                yY+ Lgv++da+e eIkkaYrkla+  HPDknp+d++a+ekF+ i eAy+vLs++e RkqYD
  KHJ31737.1  7 YYDALGVKTDATELEIKKAYRKLAIITHPDKNPGDETAHEKFQAIGEAYQVLSNAELRKQYD 68
                9************************************************************9 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.1
                 CHHHHHHHHHH CS
        DnaJ  35 kdpeaeekFke 45 
                 kdpe +++F+e
  KHJ31737.1 282 KDPEVTKAFQE 292
                 45555555554 PP

>> MutL  MutL protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   2.1e-05      0.13     313     406 ..     255     351 ..     216     369 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 2.1e-05
        MutL 313 l..iseeelrerlenlmerpktiPkteeelaldealarea.velaverHagtleelytplgrvvvqegkdltavkliigtGGvLthaprpeqilkal 406
                    +++e+++  +++l +r +++ +t+++ ++++a  ++a +e+   +  ++  +++  +g+++vq+g  l + ++ +g GG++++ +++++++k++
  KHJ31737.1 255 RtrVRQERVETLARKLIDRLSILTETNKDPEVTKAFQEKArLEVENLKMESFGLDILHAIGATYVQKGTALLKSQKFLGIGGFFSKLKDKGTLAKET 351
                 1346899999999***********************99984455555666777889999*****************************998887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1878  (0.104747); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 3427.00
//
Query:       KHJ31738.1  [L=571]
Description: putative cyclophilin type peptidyl-prolyl cis-trans isomerase cld protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-48  163.5   0.1    9.2e-48  162.5   0.1    1.6  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso
    2.6e-05   24.3   0.0    0.00017   21.7   0.0    2.2  2  U-box          U-box domain
     0.0066   16.6   0.0      0.015   15.4   0.0    1.6  1  zf-NOSIP       Zinc-finger of nitric oxide synthase-interacti
  ------ inclusion threshold ------
       0.18   12.0   0.4        3.2    8.0   0.1    2.6  2  2C_adapt       2-cysteine adaptor domain
          1    8.7  10.1       0.04   13.3   2.4    2.4  2  Rtf2           Rtf2 RING-finger


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.5   0.1   2.6e-51   9.2e-48       2     156 ..     323     471 ..     322     473 .. 0.91

  Alignments for each domain:
  == domain 1  score: 162.5 bits;  conditional E-value: 2.6e-51
  Pro_isomerase   2 vdietsskGrivieLfadkaPktvenFlklvkegfYdgttFhRvikgfmvqgGdptgktsageqekkggesi..raipdEit.sklkhkrGalama 94 
                    ++iet+ +G +++eL++d+aP +v nF++l k+g+Y+g++FhR i +fm+qgGdptg+++        g si  ++++dE++ +  +++rG+++ma
     KHJ31738.1 323 ARIETN-LGSFNVELNTDTAPRAVWNFVQLSKKGYYNGVIFHRNIANFMIQGGDPTGTGKG-------GSSIwgQNFRDEFDgPLTHNSRGIMSMA 410
                    789**7.**************************************************9663.......33334469******666555******** PP

  Pro_isomerase  95 rtgkepnsagsqFfItlkeaphldgkytvFGkVveGmdvvekiekvetde.erpkknvkivsa 156
                    ++g  +n+++sqFfIt k+a hld+k+t+FG++v+G++v++k ekv+ d+ +rp +++ ++++
     KHJ31738.1 411 NKG--KNTNSSQFFITYKPARHLDRKHTIFGRIVDGLAVLDKFEKVPGDNeNRPLNDILMENV 471
                    *98..6*****************************************99999***99988876 PP

>> U-box  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   4.8e-08   0.00017      14      56 ..      54      95 ..      46      98 .. 0.93
   2 ?   -1.3   0.0      0.69   2.5e+03      39      52 ..     119     132 ..     107     138 .. 0.75

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 4.8e-08
                -SSEEEETTTEEEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE CS
       U-box 14 mkdPvilpsgvvvdrstiekhllsrdktdPftrepltqdqlip 56
                +k Pv + +g+++d ++i k+l++ ++t+P+t +pl+q++li+
  KHJ31738.1 54 FKNPVCTLEGTIFDVEAISKWLEK-NCTNPVTGKPLKQKELIS 95
                689*********************.***************985 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.69
                 SSB-TTT-SB--GG CS
       U-box  39 dktdPftrepltqd 52 
                 + +dP+t ++lt +
  KHJ31738.1 119 EMVDPVTYKVLTDN 132
                 56788887777765 PP

>> zf-NOSIP  Zinc-finger of nitric oxide synthase-interacting protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   4.2e-06     0.015      40      70 ..      44      74 ..      10      78 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4.2e-06
    zf-NOSIP 40 fdccslslqacrdpvltedgylyekeailey 70
                f+ c+ slq+ ++pv t +g +++ eai ++
  KHJ31738.1 44 FKFCAASLQPFKNPVCTLEGTIFDVEAISKW 74
                899*************************876 PP

>> 2C_adapt  2-cysteine adaptor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.1    0.0009       3.2      11      21 ..      80      90 ..      72      92 .. 0.81
   2 ?    1.1   0.0      0.13   4.6e+02      14      23 ..     511     520 ..     511     521 .. 0.95

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0009
    2C_adapt 11 vNPlTgRkikp 21
                 NP+Tg+++k+
  KHJ31738.1 80 TNPVTGKPLKQ 90
                5********98 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.13
    2C_adapt  14 lTgRkikpdG 23 
                 +Tg++i +dG
  KHJ31738.1 511 WTGKNIHRDG 520
                 9*******98 PP

>> Rtf2  Rtf2 RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   2.4   1.1e-05      0.04      32     148 ..      42     155 ..      27     303 .. 0.76
   2 ?   -1.5   1.0      0.37   1.3e+03     165     204 ..     472     510 ..     464     561 .. 0.43

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.1e-05
        Rtf2  32 arwklCaLsqepLkkPivadrlGkLYnkdavleaLldkskekslskaashikglkdvvelkltknpafeeskkdatkdtkeapfiCpltglemngktkf 130
                   +k+Ca s +p k+P+   + G ++  +a+ + L +k+   + + + + +k  k+++ lk+ +n + ++++++ ++ +k+ + + p+t + + ++t+ 
  KHJ31738.1  42 LPFKFCAASLQPFKNPVCTLE-GTIFDVEAISKWL-EKNC--TNPVTGKPLK-QKELISLKFAHNSDADSHSTSPYNADKKGEMVDPVTYKVLTDNTHI 135
                 5699************85444.*******987765.6643..6666666776.59******************************************** PP

        Rtf2 131 valrkC..GcVfsekalkev 148
                 va+r+     Vf+ + + ++
  KHJ31738.1 136 VAIRHGneANVFAWETIEKL 155
                 *9997422346666655555 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.37
        Rtf2 165 viplnptkeelellkarleeekakkkkkkkakkkkkakak 204
                 vi + p +e +++ +++ +e+ ++++ k+    ++++k++
  KHJ31738.1 472 VIFVDPFEEFQKQTRDKEDERIQQEEIKSR-GGTEDDKKT 510
                 455555555444444444443333222222.222222111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (571 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       666  (0.0371465); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3988.18
//
Query:       KHJ31739.1  [L=871]
Description: putative histidine biosynthesis trifunctional protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   8.9e-158  525.6   0.6   1.5e-157  524.9   0.6    1.3  1  Histidinol_dh  Histidinol dehydrogenase
    3.4e-23   81.2   0.2      7e-23   80.3   0.2    1.6  1  PRA-CH         Phosphoribosyl-AMP cyclohydrolase
    2.5e-10   40.7   0.1    7.5e-10   39.1   0.1    1.9  1  PRA-PH         Phosphoribosyl-ATP pyrophosphohydrolase
  ------ inclusion threshold ------
      0.055   13.2   0.6       0.17   11.6   0.6    1.8  1  DUF3665        Branched-chain amino acid aminotransferase


Domain annotation for each model (and alignments):
>> Histidinol_dh  Histidinol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  524.9   0.6  3.3e-161  1.5e-157       5     409 .]     454     863 ..     450     863 .. 0.96

  Alignments for each domain:
  == domain 1  score: 524.9 bits;  conditional E-value: 3.3e-161
                    ----HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCSSSSGGCCEE-HHHHHHHHHCS-HHHHHHHHHHHHHHHHHHHCC----EEEEEECTTEEEEE CS
  Histidinol_dh   5 eedseeveetvkeiledvreeGdealleytekFDkvkkleslrvseeeieealekldeelkealeeaaenirkfheaqkeseeevketepgvvlgq 100
                    + ++++v++ v +i+++v+eeGd+all+yt+kF+k+++l+   + ++ ++++l +l+ e+ +a++ +++ni+kfh+aqk++    +et+pgv++++
     KHJ31739.1 454 QISTAKVTDIVIPIIKSVQEEGDNALLRYTHKFEKATSLT-SPIIKAPFHSSLMNLPVETIKAIDISFNNIEKFHKAQKDDGPLRVETMPGVICSR 548
                    567789****************************875333.457778899*****************************9666667********** PP

                    EEEE-SEEEEE---STT--CHHHHHHHHHHHHHT-SEEEEEE-SS.GG.--HHHHHHHHHCT-SEEEE--HHHHHHHHHH--SSS---SEEE---S CS
  Histidinol_dh 101 kvrpiervGlYvPgGkaaypStvlmnavpAkvAgvkeivvvtPpq.dgkvnpavlaaaklagvdeiykvGGaqAiaalAyGtesipkvdkivGPGn 195
                     +rpiervGlYvPgG+a++pSt+lm++vpA vAg+k+i+++tPp+ dg+v+p+++++a+++g+++i+ +GGaqAiaalAyGt+s+ kvdki+GPGn
     KHJ31739.1 549 FCRPIERVGLYVPGGTAVLPSTALMLGVPAMVAGCKKIIIATPPRaDGSVSPEIVYIAHKIGAESIVLAGGAQAIAALAYGTNSVCKVDKILGPGN 644
                    ************************************************************************************************ PP

                    HHHHHHHHHHCTT....BEES----S-EEEEEE-TTS-HHHHHHHHHHHHTT-TT-EEEEE..ES-HHHHHHHHHHHHHHHCC-TTHHHHHHHHCC CS
  Histidinol_dh 196 iyVaaAKrlvsge....vgiDmiaGPsEvlviaDetadpefvAaDLlsqaEHdedaqavlv..ttseelaeaveeevekqleelprkeiaekslek 285
                    ++V+aAK++vs++    v+iDm+aGPsE+l+iaD+ta+p+fvA+DLlsqaEH+ d+q++l+    se+ ++a+e+ev++q+ +lpr +i++ks+e+
     KHJ31739.1 645 QFVTAAKMYVSNDtnagVSIDMPAGPSELLIIADKTANPSFVASDLLSQAEHGVDSQVILIavDLSEDGLKAIEDEVHRQAIALPRVDIIRKSIEH 740
                    **********5544678*******************************************976889****************************** PP

                    H-EEEE-SSHHHHHHHHHHH--SEEEEESTTHHHHGGG--S-SEEEESTT--HHHHHHTSSS------TTGGGT---S-GGGGEEEEEEEEE-HHH CS
  Histidinol_dh 286 qsaiilvedleeaielaneyApEHlelqvedpeellekiknaGaiflGeyspeslgDYaaGtnhvLPTsgtArfssglsvedFlkkisvqelskea 381
                     s +++v+d+eea++l+neyApEHl+lq++d+e+ ++k+ naG+if+G ++pes+gDY aG nh LPT+g+A+++sg+++++F+k+i+  +ls+e+
     KHJ31739.1 741 -SLTLIVKDIEEAMALSNEYAPEHLILQIDDAENSVSKVINAGSIFIGGWTPESVGDYSAGVNHSLPTYGYAKQYSGVNLNSFTKHITSSHLSAEG 835
                    .*********************************************************************************************** PP

                    HHHHHHHHHHHHHHTT-HHHHHHHHHHH CS
  Histidinol_dh 382 lkelaeavetlAeaEgLeaHaeavkvRl 409
                    l++l+++v++l+++E+Le H++av++Rl
     KHJ31739.1 836 LQNLGPTVMQLSKVEELEGHQRAVDIRL 863
                    **************************96 PP

>> PRA-CH  Phosphoribosyl-AMP cyclohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.3   0.2   1.6e-26     7e-23       2      73 ..     219     290 ..     218     291 .. 0.96

  Alignments for each domain:
  == domain 1  score: 80.3 bits;  conditional E-value: 1.6e-26
                 EEEE-HHHHHHHHHHSB-EEEETTTTEEEETTTTTS--EEEEEEEE-TTSSEEEEEEEESS.-SSTTSBSSS- CS
      PRA-CH   2 laymnkealektletgkavyySrsrkklWkKGetSgnvqkvkeirlDcDqDalllkveqkg.aaCHtgkesCF 73 
                 l+y+n ++l+++l+tg+ vy Sr+r  lW+KG+tSg++q++++i+lDcD D+l + v+q+g  +CH+ +++CF
  KHJ31739.1 219 LVYSNCSSLRESLRTGTSVYLSRKR-GLWYKGATSGDTQDLVRIYLDCDMDCLKFVVHQNGaGFCHLPQSTCF 290
                 68***********************.9*********************************945********** PP

>> PRA-PH  Phosphoribosyl-ATP pyrophosphohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1   0.1   1.7e-13   7.5e-10       3      81 ..     298     377 ..     296     379 .. 0.93

  Alignments for each domain:
  == domain 1  score: 39.1 bits;  conditional E-value: 1.7e-13
                 HHHHHCT----SS----.-HHHHHH...HHHHHHHHHHHHHHHT-SCHHHHHHHHHHHHHHHHHHHHHHCT--CHHHHHHHHH CS
      PRA-PH   3 efhrligerkpetPeas.taelasl...raaligEEavElleaasegdlaeladelaDllYvtygllvllGidldavfeevhr 81 
                 +++ ++  rk+++P as ta+l+s+   + a+i+EEa+El++a    ++  +a e+aDl+Y+ +  +   G++l ++ ++++ 
  KHJ31739.1 298 KLEMTLISRKESAPPASyTARLFSDeklLHAKIMEEAEELCDAK---TKDHIAFEAADLIYFSLTKAIGCGVTLADIERNLDA 377
                 678899999999999999**************************...8*****************************999875 PP

>> DUF3665  Branched-chain amino acid aminotransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.6   3.7e-05      0.17       7      17 ..     406     416 ..     406     417 .. 0.96

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.7e-05
     DUF3665   7 RTenPTSPErL 17 
                 +TenPT PE+L
  KHJ31739.1 406 KTENPTAPEKL 416
                 8*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (871 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.30s 00:00:00.94 Elapsed: 00:00:00.45
# Mc/sec: 5760.80
//
Query:       KHJ31740.1  [L=936]
Description: putative snf2 family n-terminal domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-56  190.4   0.0    5.7e-56  189.7   0.0    1.3  1  SNF2_N      SNF2 family N-terminal domain
    1.5e-14   54.3   0.0    4.3e-14   52.8   0.0    1.9  1  Helicase_C  Helicase conserved C-terminal domain
    7.1e-11   42.4   0.1    2.1e-10   40.9   0.0    1.9  2  ResIII      Type III restriction enzyme, res subunit
     0.0018   17.5   0.0     0.0035   16.6   0.0    1.4  1  HDA2-3      Class II histone deacetylase complex subunits 2 a
  ------ inclusion threshold ------
       0.12   12.0   0.0       0.29   10.8   0.0    1.7  1  SWI2_SNF2   SWI2/SNF2 ATPase


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.7   0.0   1.6e-59   5.7e-56      54     349 ..     305     584 ..     286     585 .. 0.88

  Alignments for each domain:
  == domain 1  score: 189.7 bits;  conditional E-value: 1.6e-59
                 TT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH-----------------E CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  54 svrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydv 152
                 + +G iLaDemGLGK ++++al++++ +++  +       ++ + +Liv+P +l+ +W++e+ +++ + ++ v++++g++     n+ ++ +  + y v
  KHJ31740.1 305 NGNGAILADEMGLGKSLTTIALLWTLLKQSPFQG----CARIIQKALIVCPVTLIGNWKKEFLKWLGNERIGVFIMDGRR-----NKITDFTHGKSYSV 394
                 6789********************6666444443....55788889********************************74.....6678889999**** PP

                 EEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHTHHHHH. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
      SNF2_N 153 vittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkllqrpie. 250
                 +i++Y++l++ +      +  k +  + v+ DEgh+lk  ++k a+a+++Lst +++il+GTPiqn+l++++ +++f++++ +g+++ f k ++ pi  
  KHJ31740.1 395 MIVGYEKLRSIQ-----EELKKGIGVDIVIADEGHRLKTAQNKSAQAIRSLSTPRKIILSGTPIQNDLSEFFEMVDFVNPGLLGTYKAFTKEFEIPIMk 488
                 *********655.....35556799************************************************************************** PP

                 ...........HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH-HHHHHH CS
                 ...........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 251 ...........aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskskekilelll 338
                            +  +++ ++L +l q ++lrr+ + ++k+lP +te+iif+k ++v+ k+Y+++l          +++  ++  + +       l+l++
  KHJ31740.1 489 srqpeaskkdiKLGTARHKELSSLTQVFILRRTSEILTKYLPSRTEYIIFCKPTEVQVKVYQHVLA---------SPSFGNILGSPEA-----SLQLIT 573
                 **************************************************************4332.........2222222222222.....577777 PP

                 HHHHHHH---X CS
                 xxxxxxxxxxx RF
      SNF2_N 339 elrqacnhpql 349
                  l+++cn p+l
  KHJ31740.1 574 LLKKVCNAPSL 584
                 77777777765 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   0.0   1.2e-17   4.3e-14       6     110 ..     624     734 ..     619     735 .. 0.85

  Alignments for each domain:
  == domain 1  score: 52.8 bits;  conditional E-value: 1.2e-17
                 HHHHH..HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH....TTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHH CS
  Helicase_C   6 llell..kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn....kgesdvLiatdvaerGidipkvnlVinfdlprnvt 98 
                 l +ll   ++   +ki+i++n++++l+ ++  l++k++ +++l+g++p+++r++ +e fn    ++++ +L++ ++++ G+++ +++ ++ fd+++n++
  KHJ31740.1 624 LDQLLnqLSQCTPEKIVIVSNYTSTLDLLSQHLTSKSLPYLRLDGKTPTSKRQDLVETFNktpaSKSFAFLLSAKAGGAGLNLIGASRLVLFDVDWNPA 722
                 4444443367789*************77444456778***********************888557777****************************** PP

                 HHHHHHTTSSST CS
  Helicase_C  99 syiqriGRtgRa 110
                 +  q++ R++R 
  KHJ31740.1 723 TDLQAMARIHRD 734
                 ***********6 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   0.0   5.8e-14   2.1e-10       3     170 ..     282     453 ..     280     454 .. 0.83
   2 ?   -2.8   0.2       1.6   5.7e+03      89     118 ..     863     891 ..     831     912 .. 0.60

  Alignments for each domain:
  == domain 1  score: 40.9 bits;  conditional E-value: 5.8e-14
                 EE-HHHHHHHHHHT.........TTSEEEEEESTTSTHHHHHHHHHHHH-S............-EEEEESSHHHHHHHHHHGGGGTGG....GEEE.ES CS
      ResIII   3 elreyQeeaienlleklks...krdkrglikmaTGtGKTlvaaklierllkkgkee.......kflflvprkslleqtleefkkflseaykeigkk.vs 90 
                 +lr++Q+e ++ l e +      + + ++++ + G GK+l+ ++l + llk+ + +       k+l+++p  +l+  +++ef k+l +++  ig + ++
  KHJ31740.1 282 HLRDHQKEGVKFLYECIMGfrdFNGNGAILADEMGLGKSLTTIALLWTLLKQSPFQgcariiqKALIVCPV-TLIGNWKKEFLKWLGNER--IGVFiMD 377
                 58999999999998887764334445888999********************9999******999999996.57788***********97..6655255 PP

                 SS-B--........-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS..TTTHHHHHT---SEEEEEESS-S CS
      ResIII  91 gdkkka.kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak.kswreilekfkeavllglTATpe 170
                 g+++k+    + ++ +++++ +++l +++      +e ++    d++i DE Hrl+ + ++  +++++++   ++ l++Tp 
  KHJ31740.1 378 GRRNKItDFTHGKSYSVMIVGYEKLRSIQ------EELKKGIGVDIVIADEGHRLKTAqNKSAQAIRSLSTPRKIILSGTPI 453
                 555555677888999**************......6666777788**********9874466667899999*********95 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.6
                 ESSS-B--.......-SEEEEEHHHHHHTH CS
      ResIII  89 vsgdkkkakekdstnkkilvttiqsldads 118
                 v++ +k++ +++s+nk   ++ +q +da++
  KHJ31740.1 863 VDKIEKNR-SEKSKNKMQALMLYQHFDASL 891
                 33333333.444455555566666666665 PP

>> HDA2-3  Class II histone deacetylase complex subunits 2 and 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   9.8e-07    0.0035      89     176 ..     617     690 ..     608     778 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 9.8e-07
                 T-HHHHHHHHHHHHHTTSS....EEEEEEE-STHHHHHHHHHHTTSSSEEEESSS--S--S---S-..................-SEE CS
      HDA2-3  89 tSgKFkvlndlvnliierkrksslnvlvvakskkeldLiEalllGkklkikrysgeklydekkkkskdtkknsrktkeklkkkihslt 176
                  S+K+ vl +l+n +++ +     ++++v++   +ldL+   l +k l + r++g++  ++ ++             e+++k+  s+ 
  KHJ31740.1 617 ASAKLRVLDQLLNQLSQCT---PEKIVIVSNYTSTLDLLSQHLTSKSLPYLRLDGKTPTSKRQDLV-----------ETFNKTPASKS 690
                 59***************99...779******************************99888887776...........33344444444 PP

>> SWI2_SNF2  SWI2/SNF2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0     8e-05      0.29     122     161 ..     416     456 ..     286     476 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 8e-05
   SWI2_SNF2 122 iivlvDEaHRsqyg.elakklrkalpnaafigFTGTPilkk 161
                  iv++DE+HR ++  + +++  + l     i + GTPi+++
  KHJ31740.1 416 DIVIADEGHRLKTAqNKSAQAIRSLSTPRKIILSGTPIQND 456
                 38********8876334455666789999999******975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (936 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.45
# Mc/sec: 6317.78
//
Query:       KHJ31741.1  [L=785]
Description: putative self-glucosylating initiator of glycogen synthesis [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-24   86.9   0.8    4.8e-23   82.0   0.8    2.6  1  Glyco_transf_8  Glycosyl transferase family 8


Domain annotation for each model (and alignments):
>> Glyco_transf_8  Glycosyl transferase family 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.0   0.8   2.7e-27   4.8e-23       4     254 ..     118     328 ..     116     329 .. 0.93

  Alignments for each domain:
  == domain 1  score: 82.0 bits;  conditional E-value: 2.7e-27
  Glyco_transf_8   4 laldknYllgasvviksllknakepawfalnfhiltaeievenleklnklassykevlellesdkksledfesklklrspkylsllnylRlylpe 98 
                     l l++ Yl+ga+v+++sl     +   +++ +     ++ +  +++l +l+  +++v+++++           ++     +   + ++ ++ l++
      KHJ31741.1 118 LLLNDLYLPGALVLAHSLRDAGTK---KKIAVLFTPENVSTYVQKELLNLFDYVIPVERIENEFP--------ANLQLMNRPDLHCTFTKIKLWK 201
                     778999**************9997...8888888899********************66666544........45567788999*********** PP

  Glyco_transf_8  99 lfpkldkilylDaDvvvqgdlseLwdldlkgkvlaavedkrfkkylnksepliaenfkpeacyFnaGvllfdldewrkenitetlikwlnlnekr 193
                        +++ki+ylD+D +  +  +eL+dl+                       ++a++++ ++++Fn+G++++ ++e  ++ +++ ++k ++ +++ 
      KHJ31741.1 202 Q-FQFRKIVYLDSDMIALRAPDELFDLPYP---------------------FSAAPDIGWPDIFNSGLMVLSPNEADYNALFSMAQKGVSFDGA- 273
                     *.69************************99.....................778888*************************************. PP

  Glyco_transf_8 194 tllklgdqdilnivfkgkvkeldkkynvlglgyeqskkskkeitenaaviHyiGpaKPWld 254
                           dq ++n+ f +++++l+++ynv+++  +q+ ++++ ++ ++++iH+iG+ KPWl+
      KHJ31741.1 274 ------DQGLINMHFGNRFHRLSFTYNVTPSAHYQYVPAYQYFKSDIVMIHFIGQHKPWLQ 328
                     ......*****************************************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (785 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1579  (0.0880696); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.27s 00:00:01.00 Elapsed: 00:00:00.43
# Mc/sec: 5516.48
//
Query:       KHJ31742.1  [L=150]
Description: hypothetical protein EV44_g0970 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2230  (0.124379); expected 358.6 (0.02)
Passed bias filter:                      496  (0.0276647); expected 358.6 (0.02)
Passed Vit filter:                       160  (0.00892409); expected 17.9 (0.001)
Passed Fwd filter:                        56  (0.00312343); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.82u 0.34s 00:00:01.15 Elapsed: 00:00:00.50
# Mc/sec: 911.26
//
Query:       KHJ31743.1  [L=752]
Description: putative forkhead box protein l2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-34  116.0   0.1    1.3e-33  115.1   0.1    1.5  1  Forkhead  Forkhead domain


Domain annotation for each model (and alignments):
>> Forkhead  Forkhead domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.1   0.1   7.3e-38   1.3e-33       1      86 [.     213     298 ..     213     299 .. 0.94

  Alignments for each domain:
  == domain 1  score: 115.1 bits;  conditional E-value: 7.3e-38
                 ------HHHHHHHHHHT-TTT-B-HHHHHHHHHCC-HHHHCC.-CCHHHHHHHHHHHHC--EEETT.-T.TSS--EEE--TTHHHHH CS
    Forkhead   1 skPpysYaaLIaqAiksspekkltLseIyefieenfpyyrtaakkgWqnSirhnLslnkcFekvpreee.egkgslwtidpeseekf 86 
                 +kPp+sYa+LIa+ i+++p ++ltL++Iy++i+++f++y+  +++gWqnSirhnLslnk+F+k +r+++ +gkg++w i+p +e +f
  KHJ31743.1 213 NKPPHSYAQLIAMSILRAPARRLTLAQIYKWISDTFKFYSA-TDAGWQNSIRHNLSLNKAFVKQERPKDdPGKGNYWIIQPGMEFQF 298
                 69**************************************9.5***********************66548**********988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (752 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 4914.84
//
Query:       KHJ31744.1  [L=121]
Description: putative transcription elongation factor spt-4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-30  105.6   0.3    1.3e-30  105.3   0.3    1.1  1  Spt4           Spt4/RpoE2 zinc finger
  ------ inclusion threshold ------
      0.025   14.6   0.1      0.038   14.0   0.1    1.4  1  Coronavirus_5  Coronavirus gene 5 protein
      0.087   13.2   0.0       0.14   12.6   0.0    1.3  1  DUF1890        Domain of unknown function (DUF1890)
       0.16   11.2   0.0       0.31   10.3   0.0    1.4  2  DUF2709        Protein of unknown function (DUF2709)


Domain annotation for each model (and alignments):
>> Spt4  Spt4/RpoE2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.3   0.3   2.9e-34   1.3e-30       1      77 []      14      91 ..      14      91 .. 0.98

  Alignments for each domain:
  == domain 1  score: 105.3 bits;  conditional E-value: 2.9e-34
        Spt4  1 lrACllCklvktedqFeeegCpnC.eilelkgdkekvsectseefeGlvaildpekSwvAkwqrldkkvpglYAlkve 77
                lrAC+ C++v+t+++F +egCpnC e+l l+g+ + + +cts+ feG++a++dp kSwvAkwqrld +v+g+YA kv+
  KHJ31744.1 14 LRACMVCSIVMTQNRFFREGCPNCeEFLMLAGNMDAIIDCTSQVFEGIIALADPAKSWVAKWQRLDGYVKGVYATKVS 91
                69**************************************************************************95 PP

>> Coronavirus_5  Coronavirus gene 5 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   8.4e-06     0.038      17      54 ..      26      64 ..      11      87 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 8.4e-06
  Coronavirus_5 17 ariylregl.dcvyflnkagqaepcpactslvfqgktce 54
                      ++reg  +c  fl  ag+ +    cts vf+g    
     KHJ31744.1 26 QNRFFREGCpNCEEFLMLAGNMDAIIDCTSQVFEGIIAL 64
                   45578998758***********************97665 PP

>> DUF1890  Domain of unknown function (DUF1890)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0     3e-05      0.14      40      86 ..      60     111 ..      42     113 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3e-05
                 HHHHHHSTT-SS-SEEEEHHHHHHH--TT.....S-SEEEEEESSHHHHHHH CS
     DUF1890  40 kLlkvaDpekhYvkelvdldkaleeieek.....dvdlllgfvhnDagvsya 86 
                  ++ +aDp k +v + + ld +++ + +        d ++g++  +a ++y+
  KHJ31744.1  60 GIIALADPAKSWVAKWQRLDGYVKGVYATkvsgqLSDEVIGVIEDEARIKYI 111
                 5899*******************988766455556799************97 PP

>> DUF2709  Protein of unknown function (DUF2709)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       0.9     4e+03     148     196 ..      10      29 ..       3      33 .. 0.46
   2 ?   10.3   0.0     7e-05      0.31     140     177 ..      68     105 ..      61     115 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.9
     DUF2709 148 krkepitkvvyssvlsGklfnskeaviedfkknylkklslvevqnqnkf 196
                 ++k+    +v s v+                             +qn+f
  KHJ31744.1  10 QHKNLRACMVCSIVM-----------------------------TQNRF 29 
                 444444444444444.............................44444 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 7e-05
     DUF2709 140 iksyiektkrkepitkvvyssvlsGklfnskeaviedf 177
                  ks++ k +r +  +k vy++ +sG+l +    vied 
  KHJ31744.1  68 AKSWVAKWQRLDGYVKGVYATKVSGQLSDEVIGVIEDE 105
                 5899*******************************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       595  (0.0331865); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 929.38
//
Query:       KHJ31745.1  [L=301]
Description: putative zinc finger protein rts2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.7e-50  169.5   4.8    2.7e-50  169.5   4.8    1.6  2  Kin17_mid    Domain of Kin17 curved DNA-binding protein
      2e-05   24.8   0.4    5.4e-05   23.4   0.4    1.8  1  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
    2.8e-05   24.3   0.8      6e-05   23.3   0.8    1.6  1  zf-met       Zinc-finger of C2H2 type
  ------ inclusion threshold ------
      0.015   15.6   0.3      0.015   15.6   0.3    2.2  2  zf-C2H2_2    C2H2 type zinc-finger (2 copies)


Domain annotation for each model (and alignments):
>> Kin17_mid  Domain of Kin17 curved DNA-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.5   4.8     6e-54   2.7e-50       1     126 []      52     177 ..      52     177 .. 0.99
   2 ?   -4.1   0.4       3.2   1.4e+04     111     116 ..     191     196 ..     180     206 .. 0.41

  Alignments for each domain:
  == domain 1  score: 169.5 bits;  conditional E-value: 6e-54
   Kin17_mid   1 rqleliaentkkvieeyskeFekdFlklLrtrhgekkveankvYqeyiqdkdHvhmNaTkwtsLteFvkyLgkegkvkveetekgllisyidrspeale 99 
                 rq++li+en+kk+i++ys++F++dF++lLrt+hgek v++n++Yqeyi++k+H+hmNaT+w sLte+ kyLg+e++++vee+ekgl+i++id+spe+l+
  KHJ31745.1  52 RQMLLIGENPKKFITDYSNQFHRDFIQLLRTSHGEKLVHMNHFYQEYIHNKEHIHMNATRWLSLTEYAKYLGRESICRVEENEKGLHIAWIDNSPEKLR 150
                 89************************************************************************************************* PP

   Kin17_mid 100 rkeklekkekaekedeereekllekqi 126
                 r+++++kke++ek +eere +l+++q+
  KHJ31745.1 151 RQDAIRKKERMEKGNEERELMLIRQQV 177
                 ************************997 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 3.2
   Kin17_mid 111 ekedee 116
                 + ++ e
  KHJ31745.1 191 QLDETE 196
                 111111 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.4   1.2e-08   5.4e-05       2      26 ..      26      50 ..      25      50 .. 0.96

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 1.2e-08
                 CBBTTTTBBBSSHHHHHCCTTSHHH CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHlkSKkH 26
                 +YC++C++++ +en ++ H  S +H
   KHJ31745.1 26 WYCQVCERQMRDENGFKMHTQSESH 50
                 8*********************999 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.8   1.3e-08     6e-05       1      25 []      26      50 ..      26      50 .. 0.96

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 1.3e-08
      zf-met  1 fyCelCnvtfnsesqlksHlqGKkH 25
                +yC +C +++ +e+ +k+H q+  H
  KHJ31745.1 26 WYCQVCERQMRDENGFKMHTQSESH 50
                9********************9777 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   0.3   3.3e-06     0.015      40      80 ..       9      55 ..       3      75 .. 0.81
   2 ?    0.6   0.3      0.16   6.9e+02      18      80 ..      90     109 ..      76     130 .. 0.58

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.3e-06
   zf-C2H2_2 40 leylrekiee......kleClyCekefkslealreHmkkkgHckine 80
                ++yl++k+++      ++ C +Ce++ ++ + ++ H ++++H + + 
  KHJ31745.1  9 TKYLNNKLKSkglqrlRWYCQVCERQMRDENGFKMHTQSESHYRQML 55
                688999998888888899************************98765 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.16
   zf-C2H2_2  18 hmskkhgffipereylvdleglleylrekieekleClyCekefkslealreHmkkkgHckine 80 
                 hm++ ++ +i+                                           +k+H  +n 
  KHJ31745.1  90 HMNHFYQEYIH-------------------------------------------NKEHIHMNA 109
                 44444444444...........................................455554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1558  (0.0868983); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 2359.81
//
Query:       KHJ31746.1  [L=219]
Description: hypothetical protein EV44_g0251 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.12   12.5   0.0       0.18   11.9   0.0    1.2  1  Speriolin_C  Speriolin C-terminus


Domain annotation for each model (and alignments):
>> Speriolin_C  Speriolin C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     1e-05      0.18      61     123 ..      90     153 ..      63     164 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1e-05
  Speriolin_C  61 eslmerLkklgynkkvHpel.veklvntyGiLkerpeakasekeayeepklLrklvlevvpkkl 123
                   ++ ++ k+ gy  + H +  +  l+ +yG +++++++ + + ++ +++k+L+k+    v +++
   KHJ31746.1  90 VEVAKSFKTAGYCWNFHSATrSPDLISKYGNINKNASNLMLKCHTSHTLKYLKKIKRLSVLPSF 153
                  5788999**********8762679**************999999999******98777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1724.35
//
Query:       KHJ31747.1  [L=837]
Description: putative phd-finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-05   22.8   5.4    0.00016   21.5   5.4    1.7  1  PHD         PHD-finger
      0.009   16.6   0.1      0.009   16.6   0.1    3.7  4  ING         Inhibitor of growth proteins N-terminal histone-b
  ------ inclusion threshold ------
       0.11   12.7   0.8       0.38   11.0   0.8    1.9  1  zf-HC5HC2H  PHD-like zinc-binding domain


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   5.4   2.6e-08   0.00016       2      51 ..     773     820 ..     772     821 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 2.6e-08
                 BTTTTSTTSTTSCEEEET..TTS.CEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   2 CavCkkksdeeeelvqCd..gCk.rwfHqkClkppleseekpegewlCekCke 51 
                 C  C++     + ++ C+  +C+ +wfH +C+++ +   +  +++w+C++C+ 
  KHJ31747.1 773 C-NCNR--VSFGVMIACEgpNCEkEWFHLECVGLLEV--PPRTTKWYCPSCRV 820
                 7.7888..67999****9556*636*********987..555568******85 PP

>> ING  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   1.5e-06     0.009       2      95 ..      49     145 ..      48     151 .. 0.82
   2 ?    0.1   0.1       0.2   1.2e+03      13      38 ..     134     161 ..     128     188 .. 0.64
   3 ?   -0.5   4.1      0.31   1.8e+03      15      65 ..     234     286 ..     232     289 .. 0.83
   4 ?   -2.9   1.5       1.8   1.1e+04      45      82 ..     450     497 ..     409     514 .. 0.51

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.5e-06
                 HHHHHTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..TS..S-HHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         ING   2 LedyldsvenLPlelqrnltelreiDakvqellkeidskiekfl..kngslqknekeeels.riqeelkeaqelldeKiqlaqqaldlvdkhlrrLd 95 
                 + d+ld  e LP+++ r lt++ ++D+ + ++  ++++ +++     +  ++  +++ el+ +i ++l+e+++      + a ++ + v++hl+r++
  KHJ31747.1  49 VTDFLDFTEYLPSDMVRSLTLVGKLDQIYCDASTNVHHLAKQHAalPQLPIDGRPESAELRrDISKSLDELMNARILAHAEAIHIKENVERHLNRIK 145
                 689*********************************9999999999788889999999998899999999887665555556666666666666665 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.2
                 HHHHHHHHHHHHHHHHHHHHHHHHH..H CS
         ING  13 PlelqrnltelreiDakvqellkei..d 38 
                  + ++r+l ++++i  k+q + +++  +
  KHJ31747.1 134 KENVERHLNRIKNILTKLQAIANNYpsS 161
                 5677888888888888888888777433 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.31
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..TS..S-HHHHHHHHHHHHHH CS
         ING  15 elqrnltelreiDakvqellkeidskiekfl..kngslqknekeeelsriqee 65 
                 +lq+  ++   +D +  +++ +i +k ek    +n +++kn+k+e+++++q++
  KHJ31747.1 234 DLQKTPSLFSHLDHSNLKHKLRITHKREKEKidRNDEKDKNNKSEKVEKVQRH 286
                 7888888899999998888888877766666699**************99986 PP

  == domain 4  score: -2.9 bits;  conditional E-value: 1.8
                 H..........TS..S-HHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHH CS
         ING  45 l..........kngslqknekeeels.riqeelkeaqelldeKiqlaqq 82 
                 +           n ++++ + +++++ ++  e k + +++d Ki l + 
  KHJ31747.1 450 IasteamkdlfGN-KNNEAQNDDKIEeTVLPEDKIVDKISDHKISLPER 497
                 2333322222222.22222333333334444445556666666666555 PP

>> zf-HC5HC2H  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.8   6.3e-05      0.38      38      66 ..     772     801 ..     756     820 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 6.3e-05
  zf-HC5HC2H  38 kCylCkkkvGaciqCskkkCkk.afHvtCa 66 
                  C + + + G++i C+ ++C+k  fH+ C 
  KHJ31747.1 772 YCNCNRVSFGVMIACEGPNCEKeWFHLECV 801
                 455445669***********7527*****7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (837 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1827  (0.101902); expected 358.6 (0.02)
Passed bias filter:                      574  (0.0320152); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.74u 0.26s 00:00:01.00 Elapsed: 00:00:00.42
# Mc/sec: 5928.82
//
Query:       KHJ31748.1  [L=192]
Description: putative ribosome biogenesis protein rlp24 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      6e-30  103.3   6.0    1.6e-29  101.9   6.0    1.7  1  Ribosomal_L24e  Ribosomal protein L24e
  ------ inclusion threshold ------
        5.8    7.3   7.6        5.9    7.3   1.3    2.5  2  DUF2175         Uncharacterized protein conserved in archaea 


Domain annotation for each model (and alignments):
>> Ribosomal_L24e  Ribosomal protein L24e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.9   6.0   1.7e-33   1.6e-29       3      64 ..      17      78 ..      15      80 .. 0.97

  Alignments for each domain:
  == domain 1  score: 101.9 bits;  conditional E-value: 1.7e-33
                    X-B-TTT-SB--SS--EEEE-TTS-EEEESSHHHHHHHHTT--GGGSTTSTTT-XXXXXXXX CS
  Ribosomal_L24e  3 tekCsFsgykiyPGhGkrfvrnDgkvfrFlssKceklfkqkrnPrklkWTkayRrahkkelt 64
                    +e+C+F+++++yP++G++fvrnD++vfrF++sKc+k+fk+krnPrklkWTka+R++++ke+ 
      KHJ31748.1 17 IETCYFCSQPCYPSKGITFVRNDARVFRFCRSKCHKNFKMKRNPRKLKWTKAFRKNAGKEMI 78
                    79*********************************************************996 PP

>> DUF2175  Uncharacterized protein conserved in archaea (DUF2175)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   1.3   0.00066       5.9       4      42 ..      19      57 ..      16      78 .. 0.81
   2 ?    3.3   0.5     0.011        98      56      98 .]     117     161 ..      71     161 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00066
     DUF2175  4 kCyiCgkeivegekFTft.kkgvvHyeClvekarkklkes 42
                +Cy+C++  +  +  Tf+ +++ v   C ++k +k++k +
  KHJ31748.1 19 TCYFCSQPCYPSKGITFVrNDARVFRFC-RSKCHKNFKMK 57
                7*****************8999998888.56666666655 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.011
     DUF2175  56 neeivklkel..ervaedeevkkvleqkrkelEkaaakltkklek 98 
                 +e + ++k++  +r+ e+e  kk++e++   l + ++ ++kkle+
  KHJ31748.1 117 RERVFYKKRMagNRLREKELNKKLVETQSHLLPRMSGTMKKKLEE 161
                 456677776533577999999999999999999999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1461  (0.0814881); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1462.93
//
Query:       KHJ31749.1  [L=735]
Description: putative transient receptor potential ion channel [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     3e-135  451.2  17.2   4.1e-135  450.8  17.2    1.1  1  TRP       Transient receptor potential (TRP) ion channel
      3e-39  134.5   2.6    6.6e-39  133.5   2.6    1.6  1  TRP_N     ML-like domain
  ------ inclusion threshold ------
        1.8    9.2   9.0         36    5.0   5.0    3.4  3  DUF4405   Domain of unknown function (DUF4405)


Domain annotation for each model (and alignments):
>> TRP  Transient receptor potential (TRP) ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  450.8  17.2  6.8e-139  4.1e-135       1     421 [.     170     630 ..     170     635 .. 0.88

  Alignments for each domain:
  == domain 1  score: 450.8 bits;  conditional E-value: 6.8e-139
         TRP   1 vkwvtaviaglallasnasavastlgnsn.......aaahvaas....vlslflyfQsvafigmlsvnyPpvlaawtqnfaWsmglirvsfmqkiinwy 88 
                 v++v+a+iag+al++++a+ v ++ g           +ah++ +    ++++f++fQ +a++gm+svnyPpv++++t nfa+s+gli+++ mq++i+++
  KHJ31749.1 170 VSYVAAGIAGAALIMTGATTVGAAAGAAGgglhsvgNSAHITGTttpsFIEVFSWFQGLAMNGMISVNYPPVYRSFTRNFAFSTGLIPWTAMQSSIDNF 268
                 89*************877777766666667777888445554444555*************************************************** PP

         TRP  89 vqstgG....tatlvlsssstssvsv.....kral....................krgesk.slpesssklvrGikrvaekagiestnafmtgllffli 157
                 +  tgG    ++ ++l++s++  v +     +ra                     + ++++ ++ ++ +++++Gik+++e+++++++n+f+t+ll+++ 
  KHJ31749.1 269 RALTGGnltgNSVQYLKDSKKGYVIGaskisQRAYhsvitirdtnsnsvdsirmgTVSNTTsNSLSKAETTINGIKAYVEELSVPEANTFLTVLLIVAC 367
                 ******5555444555554444444444433133355555555577777777665223333133333333359************************** PP

         TRP 158 liallvvlvllfKlllellarkklikedrlkefrknwlgilkgallrlilifffqllvlclfeftqrdsaavvvlAvillalflgvllffafrvlitar 256
                 +ia +vv++llfK++le++a ++ +++++l+ frk+++ ++++ +++lil+++++++++c+f+ft++ds+a++ lA+  l++  gvl++faf++l ta+
  KHJ31749.1 368 VIATIVVGILLFKVILETWALFG-SFPKSLAGFRKHYWATMARSIVQLILVLYGIWVLYCIFQFTNGDSWAAKTLAAASLTVASGVLMYFAFKILKTAN 465
                 ***********************.89************************************************************************* PP

         TRP 257 kskrlhknpaylLysdkkvlnkyGflyeqyrasrywffvpllvylfvkalfialaqgsGkvQvialliiEllylvlliwlrPyedkrtnvlniiisvvk 355
                 k k++ ++++  Ly+dkk + ky+++y++y ++++w+f+p+++y+f+k++++a+++g+G+ Q+i +liiEll+l ll+w rP+e++++nv+niii++v+
  KHJ31749.1 466 KLKEMDGDAS-GLYKDKKNWLKYSMFYDSYSKDYWWMFLPVILYMFAKGCILAAGNGHGLGQTISQLIIELLMLGLLLWKRPFERRSGNVINIIIQIVR 563
                 *999988777.**************************************************************************************** PP

         TRP 356 vlnvilllaFseefglseivktvvGvvlivinavlalvlliliivnaiiallsknpdrryrp.akdd 421
                  l+v+++l+F+ee+g+s++++tv+Gvvli+ +++l+ vl+ili+ naii+++++np+r++r+ a +d
  KHJ31749.1 564 GLSVACILVFVEELGISQTTQTVTGVVLIACQSILTGVLAILIATNAIIMFCKQNPHRKRRKaATKD 630
                 **********************************************************999854444 PP

>> TRP_N  ML-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.5   2.6   1.1e-42   6.6e-39       1     138 [.      27     164 ..      27     165 .. 0.98

  Alignments for each domain:
  == domain 1  score: 133.5 bits;  conditional E-value: 1.1e-42
       TRP_N   1 lvtssfenClensqftaskfdvtftpdnktvvfnvtgtssienkavtlelkveaygyevvnetvdpCdan..vkglCPlgpgfkinasgvlkvseevvs 97 
                 l+tssf +Cl +s++t++++d+++++d+k+v+f+v+gts+ e++ vt++l+v ayg++v+++++dpC+++  v++lCP+++g ++ a+g++ +++e++s
  KHJ31749.1  27 LRTSSFISCLPESNITVQNLDIKYNADEKQVTFDVAGTSTSEQN-VTAQLNVIAYGINVYQKSFDPCSSStyVSHLCPVPEG-EFLATGTQVIPDEYAS 123
                 6799***************************************9.*************************************.999*****9******* PP

       TRP_N  98 eipsiaYsipdldatvrvriystgeateiaCvsatitngkt 138
                 +ip+ia+s+pd++at+++++++ ++  ++aC++a+++ngkt
  KHJ31749.1 124 QIPGIAFSVPDISATATLQLKALDTDVDVACIKANVNNGKT 164
                 *********************98899**************9 PP

>> DUF4405  Domain of unknown function (DUF4405)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   5.0    0.0061        36       2      46 ..     360     407 ..     359     423 .. 0.74
   2 ?    3.7   0.0     0.015        90       7      26 ..     441     459 ..     438     485 .. 0.81
   3 ?   -3.8   0.1         3   1.8e+04      12      20 ..     583     591 ..     579     593 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0061
     DUF4405   2 idlllllsflvlaiSGillsfavlpsgrgaywa........flglskhqwrdi 46 
                 + ll++ + +++++ Gill++++l+ +     a        + g+ kh w  +
  KHJ31749.1 360 TVLLIVACVIATIVVGILLFKVILETW-----AlfgsfpksLAGFRKHYWATM 407
                 56899999***************9944.....334466888777788888766 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.015
     DUF4405   7 llsflvlaiSGillsfavlp 26 
                 l +  +++ SG+l++fa + 
  KHJ31749.1 441 LAAASLTVASGVLMYFA-FK 459
                 567788999******99.65 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 3
     DUF4405  12 vlaiSGill 20 
                 +++++G++l
  KHJ31749.1 583 TQTVTGVVL 591
                 678999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (735 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1062  (0.0592336); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 4960.81
//
Query:       KHJ31750.1  [L=289]
Description: putative fe superoxide dismutase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-15   56.3   0.0      2e-07   31.1   0.0    2.4  2  Sod_Fe_C  Iron/manganese superoxide dismutases, C-terminal do
  ------ inclusion threshold ------
      0.015   15.3   0.1      0.023   14.7   0.1    1.2  1  DUF4973   Domain of unknown function (DUF4973)


Domain annotation for each model (and alignments):
>> Sod_Fe_C  Iron/manganese superoxide dismutases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0     8e-09   7.2e-05       3      56 ..     118     171 ..     116     185 .. 0.85
   2 !   31.1   0.0   2.3e-11     2e-07      62     102 .]     233     279 ..     220     279 .. 0.83

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 8e-09
                 HHHHHHHHHHHSSHHHHHHHHHHHHHHSSSSEEEEEEEETTTEEEEEEEETTTB CS
    Sod_Fe_C   3 gelaeaieedfgslekfkkefkaaalavfgsGwawLvldkkkkLeivttknqdn 56 
                 ++l  ++ ++fgs+e++k+e+  +a a+fg G++wLv+d +++  ++ t  + +
  KHJ31750.1 118 EKLRLQLIKSFGSIETLKSEMLFTASAMFGPGFVWLVKDFENNYFVLATYLAGS 171
                 577888999*****************************9887776766665555 PP

  == domain 2  score: 31.1 bits;  conditional E-value: 2.3e-11
                 TCEEEEEE-SGGGTHHHH......TT-HHHHHHHHGGGBBHHHHHHH CS
    Sod_Fe_C  62 akplLalDvwehAYyldy......qnkradYieafwnvvnWkeveer 102
                  +p+L+++vw+h +  dy      +  ++ Y+e++w+ +nWk v++r
  KHJ31750.1 233 LVPILCVNVWQHVFLPDYgirpsiNGGKPRYLENWWKKINWKVVSQR 279
                 46***************94433333459****************986 PP

>> DUF4973  Domain of unknown function (DUF4973)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.1   2.6e-06     0.023      42      90 ..      65     114 ..      43     128 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 2.6e-06
                 --.--------EEEEEEE-HHHHHHHHHHHHTT-GGGSEEETTSTSEE-- CS
     DUF4973  42 vs.GstknerdldvkvavDaDtleilnleryaeredlyykeleekyysfp 90 
                 vs  s kn +d+ ++ a D+   +i+n++ +a+ + +++++++e   s +
  KHJ31750.1  65 VSdCSSKNPKDIAIQYARDPTNASIFNYASFAHNNHFFFESIDEGTTSPE 114
                 5425899***********************************99876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       356  (0.0198561); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 2034.03
//
Query:       KHJ31751.1  [L=3213]
Description: putative involucrin repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (3213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2041  (0.113838); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.63u 0.34s 00:00:01.97 Elapsed: 00:00:00.56
# Mc/sec: 17320.48
//
Query:       KHJ31752.1  [L=667]
Description: putative transcriptional regulatory protein pro-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-72  243.4   0.7    4.2e-72  243.1   0.7    1.1  1  Fungal_trans_2  Fungal specific transcription factor domain
      2e-07   31.0   7.9    3.8e-07   30.1   7.9    1.5  1  Zn_clus         Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Fungal_trans_2  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  243.1   0.7   4.7e-76   4.2e-72       1     384 []     274     667 .]     274     667 .] 0.93

  Alignments for each domain:
  == domain 1  score: 243.1 bits;  conditional E-value: 4.7e-76
  Fungal_trans_2   1 elldyyldnvapllspvpes...snpfrkvllplalsnkallhallalsafhlqskgpkds..lereakrykslalkelqealaelsstlsrnek 90 
                     +ll +++++v p+ +p+ e    ++     ++  +++nk++lh++l+++a hl+++++ +   ++++++r+++ +++el+ al ++s + s    
      KHJ31752.1 274 RLLGFFISDVLPIAFPILEMnlrGSARTHHVISALQRNKCYLHCCLSIAAQHLKASQQTSDnqIDEDVMRHRDITISELCGALDRDSYQDS---- 364
                     5899******************888888889999999****************77766666679***************************.... PP

  Fungal_trans_2  91 ykdiLaaiLllcsieissgdvsd......wrvhLeaatsliksrggskasssslss..karfllrifayldilssttlgrgpsfpseeyekllen 177
                        +L a+L l++++ ++g  +d      w++h++aatsl++++ +  +s  ++++   +++++++ a++dil++t+lgr+p f+++++e++l++
      KHJ31752.1 365 ---TLEAMLGLIIFQGCVGRLEDtlpdipWHQHFQAATSLVQKLDLHRLSGGNIYEqgNLSLNMTLTAWIDILGATMLGRAPIFAHTYRERHLSE 456
                     ...*****************7778899********************444444444559************************************ PP

  Fungal_trans_2 178 kkeesdsgldplmGcsnslilliseisrLarekrsarkdseleplsileeaseleqrllswkprssdlepdldeterassls..kdltelfrlaa 270
                        +s+ gl++lmGc++ +++lisei++L + k+    +      +++ ++++l  +++ ++  +  ++ + +   ++   +  +++t +fr+aa
      KHJ31752.1 457 --INSSLGLQSLMGCDDNVLYLISEIACLEALKNGGMGE-----FELCHHVEQLGYQISLTENGDAGSSGCFNKFGELLPEQvsRNVTDAFRIAA 544
                     ..*****************************99888777.....********************9***9*99999999888888999******** PP

  Fungal_trans_2 271 liylyrlvlglppsspevqelvkkllellellpsspv.aiasLlWplFiaGceavde.ddRdfvrrrleele.qsrlgnvrrarqvleevWrrrd 362
                     +iyl++lv+g+   +++++ l++kl++ll ++ps+p  +++sL+W  +iaG++ v+e ++R  + +rle+l+ ++++g  +r+  +l+evW + d
      KHJ31752.1 545 RIYLCSLVPGFRIIDDKIMALINKLTQLLTYIPSGPSgFDRSLVWVYLIAGSATVTEsPFRAILSERLEALGdKASFGCLGRVSCILKEVWGQID 639
                     *********************************99999******************99************************************* PP

  Fungal_trans_2 363 dgee......kidWrdvmekkgwellla 384
                     d  +       ++Wrdvm+++gw++ll+
      KHJ31752.1 640 DCIHenssigYVSWRDVMQSMGWDYLLI 667
                     6333445667888*************96 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   7.9   4.3e-11   3.8e-07       2      36 ..      36      69 ..      35      72 .. 0.93

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 4.3e-11
                S-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTC CS
     Zn_clus  2 aCdnCrkkKvKCdakkPaCsnCkklnleCtfyses 36
                +C +Cr ++ KCd+++P+C+ C+ l+l+C  y+++
  KHJ31752.1 36 GCYTCRLRRKKCDEGTPSCTACRHLGLKCD-YKRP 69
                7*****************************.8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (667 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 4481.25
//
Query:       KHJ31753.1  [L=686]
Description: putative ph domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-09   36.1   0.1    2.2e-08   34.1   0.1    2.1  1  SAM_2     SAM domain (Sterile alpha motif)
    9.1e-08   32.6   1.2    2.6e-07   31.1   0.3    2.3  2  PH        PH domain
    1.8e-06   28.3   0.7    9.9e-06   25.9   0.1    2.5  2  SAM_1     SAM domain (Sterile alpha motif)
     0.0076   16.6   0.6     0.0076   16.6   0.6    3.5  4  PH_11     Pleckstrin homology domain
  ------ inclusion threshold ------
      0.027   14.4   0.1       0.07   13.1   0.1    1.7  1  SAM_PNT   Sterile alpha motif (SAM)/Pointed domain
       0.52   10.7   3.8       0.51   10.7   0.5    2.6  2  PH_9      Pleckstrin homology domain


Domain annotation for each model (and alignments):
>> SAM_2  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.1   0.1   7.4e-12   2.2e-08       4      66 .]     143     205 ..     141     205 .. 0.96

  Alignments for each domain:
  == domain 1  score: 34.1 bits;  conditional E-value: 7.4e-12
                 HHHHHHHHHHHHTTT.GGGHHHHHHTTCSHHHHHTTSCHHHHHHTTHHHHHHHHHHHHHHHHHH CS
       SAM_2   4 wsledvaeWLrsigl.kqytdnFrdagitgaelllrlteedLkrlGitsvghrkkilkkiqelk 66 
                 w++  v++W   +g+    +++F+++ i+g  +ll l+ edL +l+i+s+  rkki++++++l+
  KHJ31753.1 143 WTPRHVSRWMHHVGFdILIAEKFEKNDISG-AILLTLKFEDLNELDISSFRLRKKIWNEVENLR 205
                 99*************8889***********.******************************995 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       4.1   1.2e+04      41      58 ..     242     259 ..     218     280 .. 0.71
   2 !   31.1   0.3   8.6e-11   2.6e-07       4     102 ..     539     666 ..     536     669 .. 0.71

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 4.1
                 ESSEEEEEESTTEEEEEE CS
          PH  41 dkepkgsislsncevvev 58 
                 + ++++ i++s+c + +v
  KHJ31753.1 242 EASYTNLINVSKCGINQV 259
                 445577788888877765 PP

  == domain 2  score: 31.1 bits;  conditional E-value: 8.6e-11
                 EEEEEEETSSSSC.SEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEEC.....................TTSSSSTSEEEE........ CS
          PH   4 eGwLlkkgsgkkk.swkkrwfvLkdsellyykndksekdkepkgsislsncevvevva.....................tedpkrkfcfel........ 72 
                  Gw+ k++ +     w+ ++f Lk+++l+++kn+  e  ++  + i++++  +v                         + + + +f f+l        
  KHJ31753.1 539 AGWMRKRKTKILRfDWQNYYFSLKGTQLAMHKNE-HECLFDAIEYIDIDDYAIVCS-SfatsskfhaaframsisrkeeQQKNTAPFAFQLvpasvkkg 635
                 69*99888887778********************.555555555555555555532.235555555555555555555467999999999988776655 PP

                 .EESTSSST....EEEEEEESSHHHHHHHHHHHHH CS
          PH  73 .riverngs....rtyllqasseeerkeWikaiqs 102
                  r++    +    + +++++ s+ er++W++ i  
  KHJ31753.1 636 gRLN----TcrkiKAHYFAVQSQNERSDWMREIML 666
                 5333....13335******************9965 PP

>> SAM_1  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.1   3.3e-09   9.9e-06       3      64 .]     143     205 ..     142     205 .. 0.94
   2 ?   -1.4   0.0       1.1   3.3e+03       9      23 ..     658     672 ..     652     678 .. 0.70

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 3.3e-09
                 TTHSSHHHHHHHTTS.GGGHHHHHTTTSSHHHHTTSCHHHHHHCTTTSHHHHHHHHHHHHHHH CS
       SAM_1   3 wsvedVgeWLesigl.gqYadlFrageidgdaLlllteddLeklgvtllGHrkkIlyaIqrLk 64 
                 w+++ V++W+++ g+    a++F+++ i+g  Ll+l+ +dL +l ++++  rkkI ++++ L+
  KHJ31753.1 143 WTPRHVSRWMHHVGFdILIAEKFEKNDISGAILLTLKFEDLNELDISSFRLRKKIWNEVENLR 205
                 9**************55667899***********************************99986 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.1
                 HHHHHHTTSGGGHHH CS
       SAM_1   9 geWLesiglgqYadl 23 
                 ++W+++i l++ +++
  KHJ31753.1 658 SDWMREIMLAKAMHK 672
                 689999988776655 PP

>> PH_11  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0         1   3.1e+03      57      89 ..     208     243 ..     195     252 .. 0.69
   2 ?    2.8   0.0     0.051   1.5e+02      40      92 ..     261     313 ..     247     318 .. 0.88
   3 ?   -2.4   0.1       2.1   6.3e+03      74      92 ..     381     399 ..     345     419 .. 0.55
   4 !   16.6   0.6   2.6e-06    0.0076       2     102 ..     539     664 ..     538     667 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1
       PH_11  57 saalfkidsirs...sksddllleistetkifflkg 89 
                 s++ f+++s+     ++ d++ll++s e k  +l++
  KHJ31753.1 208 SYKSFEKSSSLDrsvKSIDEELLTLSEENKSHQLEA 243
                 455554444333346788888889999888888776 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.051
       PH_11  40 viklSngseaklkadlisaalfkidsirssksddllleistetkifflkgdsn 92 
                 vi  S+ +++ l    ++++++ + ++r+ k dd+ +   +e+ i  ++g+sn
  KHJ31753.1 261 VILPSCIKSGSLSKLDSEIENTIVMEDRNTKVDDISKREGQELLIENFYGQSN 313
                 6778999******************************9999999988888887 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 2.1
       PH_11  74 llleistetkifflkgdsn 92 
                 + +++++e + + +k+d+n
  KHJ31753.1 381 ENVKQFIESQSLSMKTDEN 399
                 3333333333444444443 PP

  == domain 4  score: 16.6 bits;  conditional E-value: 2.6e-06
       PH_11   2 kGylkkkgsk....aWkrrwfavlkdgvLeyYksekkkv...vkhviklSngseaklkadlisaalf.........kidsirs..........sksddl 74 
                 +G+++k++ k     W++++f  lk ++L   k+e+++    ++++      +++   a  +++++          + ++++           s ++  
  KHJ31753.1 539 AGWMRKRKTKilrfDWQNYYF-SLKGTQLAMHKNEHECLfdaIEYIDIDDYAIVCSSFATSSKFHAAframsisrkEEQQKNTapfafqlvpaSVKKGG 636
                 6999999999***********.*****************999555544444444433333322222223333333233333336777888877777788 PP

       PH_11  75 lleistetkifflkgdsneeteeWveal 102
                 +l+   + k  +++ +s++e+ +W++ +
  KHJ31753.1 637 RLNTCRKIKAHYFAVQSQNERSDWMREI 664
                 8888888888889999999999999876 PP

>> SAM_PNT  Sterile alpha motif (SAM)/Pointed domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   2.3e-05      0.07      18      81 ..     141     205 ..     132     208 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2.3e-05
                 GG--HHHHHHHHHHHHHHTT-SS-HGGGCTS-HHHHHHS-HHHHHHHSCH..CCHHHHHHHHHHHH CS
     SAM_PNT  18 qeWtkehVlewlewavkefdlakidfsefdmsGkeLcsltkeefleaapl..laGdiLyehLqnlr 81 
                   Wt +hV  w++++     +a+ +f++ d+sG+ L++l  e+++e+        +++++ ++nlr
  KHJ31753.1 141 ACWTPRHVSRWMHHVGFDILIAE-KFEKNDISGAILLTLKFEDLNELDISsfRLRKKIWNEVENLR 205
                 57************987765555.788889**************9864333356667777777776 PP

>> PH_9  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.2       1.2   3.7e+03      37      85 ..     391     436 ..     382     445 .. 0.53
   2 ?   10.7   0.5   0.00017      0.51      18      46 ..     546     606 ..     536     669 .. 0.61

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.2
        PH_9  37 vLylykdeeesesaetedlks..lknakllgkirlhhaLaek.asdYkkksh 85 
                  L + +de+  ++++ ++l+s  +kn       + +  La++ + dY + s 
  KHJ31753.1 391 SLSMKTDENYLKQKTNQELQSqaPKN------ENFNNFLAKPqVLDYVRSSA 436
                 55555555544444444443311222......24555566665566665555 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00017
        PH_9  18 ktplkkrgWkevyavlkklvLylykdee................................e 46 
                 kt + +  W++ y  lk+++L ++k+e+                                +
  KHJ31753.1 546 KTKILRFDWQNYYFSLKGTQLAMHKNEHeclfdaieyididdyaivcssfatsskfhaafR 606
                 34456778********************776666666666666555555555555555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (686 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       827  (0.0461264); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 4611.96
//
Query:       KHJ31754.1  [L=345]
Description: hypothetical protein EV44_g1953 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.099   12.5   0.5       0.22   11.4   0.5    1.5  1  gag_pre-integrs  GAG-pre-integrase domain
       0.15   12.2   2.2       0.29   11.3   2.2    1.5  1  Integrase_H2C2   Integrase zinc binding domain


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.5   2.5e-05      0.22      25      64 ..     228     271 ..     208     273 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.5e-05
  gag_pre-integrs  25 nlWHrRLGHpsfsrlkkLfk.kgl..lpglkisk.sevCeaCql 64 
                      +   rR+GH s+ r+ k+ +  g+  +  ++i++  +vC++Cq+
       KHJ31754.1 228 RQLYRRFGHRSVHRVYKILQrAGHddIEYKTIEHlTKVCHHCQI 271
                      56679*******9988887633334466667766688*****97 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   2.2   3.2e-05      0.29      10      56 ..     227     273 ..     220     275 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3.2e-05
  Integrase_H2C2  10 lkeaHdsagHlGiektlerlrrryyWpgmrkdvkkyvksCetCqrrk 56 
                     l+++    gH +++++++ l+r  +    +k++++  k C+ Cq + 
      KHJ31754.1 227 LRQLYRRFGHRSVHRVYKILQRAGHDDIEYKTIEHLTKVCHHCQINA 273
                     67777889************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       466  (0.0259914); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2498.45
//
Query:       KHJ31755.1  [L=143]
Description: putative signal recognition particle 14kd protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.4e-25   87.1   0.0    1.5e-24   86.2   0.0    1.5  1  SRP14           Signal recognition particle 14kD protein
  ------ inclusion threshold ------
      0.022   15.0   0.0      0.051   13.8   0.0    1.7  1  Vps36_ESCRT-II  Vacuolar protein sorting protein 36 Vps36


Domain annotation for each model (and alignments):
>> SRP14  Signal recognition particle 14kD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.2   0.0   1.7e-28   1.5e-24       1      95 [.       6     110 ..       6     112 .. 0.92

  Alignments for each domain:
  == domain 1  score: 86.2 bits;  conditional E-value: 1.7e-28
       SRP14   1 lsndeFlteLtelfeksrekgkgsVyltqKrlt.......eakkaeskeeeesseekeykcLiRatdgkkk....kkvkisTvVeakdlekFqarYaev 88 
                 ls+++F+ +Lt lf+ +r k++gsV+ltqKrl+       ++ + + + ++ + + k++++LiRat+g++      k+k+sTvVea+dl++F+arY e+
  KHJ31755.1   6 LSHEDFFIRLTALFDACRDKNHGSVFLTQKRLSygqnvelPEASGSLPFNDLNLS-KSLPILIRATNGRSSrsltPKIKLSTVVEANDLNNFFARYMEI 103
                 799****************************99****998666777777666666.99*************9*************************** PP

       SRP14  89 lkagmdg 95 
                 +k g ++
  KHJ31755.1 104 CKLGTNK 110
                 **98765 PP

>> Vps36_ESCRT-II  Vacuolar protein sorting protein 36 Vps36
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   5.7e-06     0.051      35      70 ..      25      60 ..      21      86 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 5.7e-06
  Vps36_ESCRT-II 35 rqnGrlyLTthriiyvdsadpkkeslslelklvesv 70
                    +++G ++LT++r+ y ++ +  ++s sl+ ++++ +
      KHJ31755.1 25 KNHGSVFLTQKRLSYGQNVELPEASGSLPFNDLNLS 60
                    689*****************9999999998887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       851  (0.047465); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1049.43
//
Query:       KHJ31756.1  [L=466]
Description: putative rnp domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.1e-49  163.5   0.0    2.4e-17   62.5   0.0    3.7  4  RRM_1           RNA recognition motif. (a.k.a. RRM, RBD, or R
     0.0015   18.2   0.0      0.022   14.3   0.0    2.2  2  ATP-grasp_2     ATP-grasp domain
     0.0016   18.5   0.3         14    5.9   0.0    4.1  3  Limkain-b1      Limkain b1
     0.0021   18.1   0.0        4.8    7.3   0.0    3.4  3  RRM_3           RNA binding motif
  ------ inclusion threshold ------
      0.018   14.6   0.0        5.3    6.7   0.0    2.5  2  RRM_5           RNA recognition motif. (a.k.a. RRM, RBD, or R
      0.038   14.7  42.2      0.041   14.6   2.1    3.0  3  GRP             Glycine rich protein family
       0.17   11.7   0.0         37    4.1   0.0    2.9  3  RRM_Rrp7        Rrp7 RRM-like N-terminal domain
       0.26   11.0   0.3        1.2    8.9   0.0    2.1  2  Vta1_C          Vta1 C-terminal domain
        1.9    7.4  19.1        2.6    7.0  19.1    1.1  1  THRAP3_BCLAF1   THRAP3/BCLAF1 family


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.0   4.1e-13   8.2e-10       1      69 [.      91     161 ..      91     162 .. 0.89
   2 !   58.3   0.0   2.4e-19   4.8e-16       1      69 [.     210     281 ..     210     282 .. 0.95
   3 !   62.5   0.0   1.2e-20   2.4e-17       1      69 [.     368     436 ..     368     437 .. 0.98
   4 ?   -0.5   0.0      0.56   1.1e+03      37      57 ..     434     454 ..     433     457 .. 0.80

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 4.1e-13
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEE..EEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgksk..gfafVeFeskedAekAlealngkklggrel 69 
                 ++VgnL++dv+++ Lk++++  G++  +++    +g sk   + +Ve++++e+A++A+++l ++ l+gr +
  KHJ31756.1  91 VYVGNLSYDVKWHHLKDFMRSAGEVLFADVLLLPNGMSKvgVYTIVEYATREQAQQAVNTLSNQSLMGRLV 161
                 8************************988888886666653369*************************965 PP

  == domain 2  score: 58.3 bits;  conditional E-value: 2.4e-19
                 EEEESETTTSSHHHHHHHHHT...TSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFsk...fGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ++V+nLp++v +++Lk+lF++    G ++++++    +g++kg ++V Fes++dA++A++++ng+  +gr+l
  KHJ31756.1 210 IYVSNLPYTVGWQDLKDLFRQaarNGAVVRADVHVGPDGRPKGSGIVAFESSDDARNAIQQFNGYDWQGRPL 281
                 8*******************9666799****************************************99987 PP

  == domain 3  score: 62.5 bits;  conditional E-value: 1.2e-20
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ++V+nLp+++++e+L elF  +G+++ +++ ++ +g+s+g++ V+F+  e+Ae A+e++ g+++ggr+l
  KHJ31756.1 368 IYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRFDVVESAETAIEKFSGYQYGGRPL 436
                 8*****************************************************************986 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.56
                 SEEEEEEEEESSHHHHHHHHH CS
       RRM_1  37 kskgfafVeFeskedAekAle 57 
                 ++ g  fV+++++    +A+e
  KHJ31756.1 434 RPLGLSFVKYQTPAGNGDAME 454
                 677999*****9988777766 PP

>> ATP-grasp_2  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   1.1e-05     0.022      29      77 ..     223     273 ..     209     279 .. 0.85
   2 ?    1.1   0.0      0.13   2.5e+02      16      77 ..     368     428 ..     356     433 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.1e-05
                  HHHHHHHHHTSSSEEEEE--SSS..TCCCTTCEEEESSHHHHHHHHHCCTT CS
  ATP-grasp_2  29 eaeeaakklgekelvvKaQvlaG..GRGKagGvklvkskeeakeaakellg 77 
                  ++++ +++  ++ +vv+a v++G  GR K++G+   +s ++a++a++++ g
   KHJ31756.1 223 DLKDLFRQAARNGAVVRADVHVGpdGRPKGSGIVAFESSDDARNAIQQFNG 273
                  56667777788889*********88999*****************998766 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.13
                  ----SEEEESSHHHHHHHHHHHTSSSEEEEE--SSSTCCCTTCEEEESSHHHHHHHHHCCTT CS
  ATP-grasp_2  16 vkvpegevaesaeeaeeaakklgekelvvKaQvlaGGRGKagGvklvkskeeakeaakellg 77 
                  + v +    +s+e++ e ++ +g+ e     Q    GR ++ Gv   + +e a++a++++ g
   KHJ31756.1 368 IYVRNLPWSTSNEDLVELFTTIGKVE-QAEIQYEPNGRSRGTGVVRFDVVESAETAIEKFSG 428
                  66677777889999999999999988.678888899********999999999998888765 PP

>> Limkain-b1  Limkain b1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.018        35      42      76 ..     132     166 ..     125     173 .. 0.86
   2 !    5.9   0.0    0.0069        14      41      76 ..     251     286 ..     209     292 .. 0.83
   3 ?    2.7   0.0     0.065   1.3e+02      40      63 ..     405     428 ..     365     446 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.018
  Limkain-b1  42 ksavlrfanqeaaeralkrleneDvfGnritvsek 76 
                    ++ +a +e a++a+  l n    G  + v+e 
  KHJ31756.1 132 VYTIVEYATREQAQQAVNTLSNQSLMGRLVYVRED 166
                 55799**********************99999987 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0069
  Limkain-b1  41 gksavlrfanqeaaeralkrleneDvfGnritvsek 76 
                 ++s ++ f++ + a+ a++++++ D  G  + v+e 
  KHJ31756.1 251 KGSGIVAFESSDDARNAIQQFNGYDWQGRPLEVRED 286
                 5799*********************99998888875 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.065
  Limkain-b1  40 sgksavlrfanqeaaeralkrlen 63 
                 s ++ v+rf   e+ae a+ ++ +
  KHJ31756.1 405 SRGTGVVRFDVVESAETAIEKFSG 428
                 667889999999999998887766 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.031        61      12      60 ..      99     154 ..      91     170 .. 0.72
   2 ?    2.8   0.0     0.062   1.2e+02      39      57 ..     253     271 ..     221     287 .. 0.85
   3 !    7.3   0.0    0.0024       4.8      13      57 ..     377     426 ..     370     432 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.031
                 S--HHHHHHHCHCCS-ECEEEE-.......TTSSEEEEEESSHHHHHHHHHHHHHC CS
       RRM_3  12 elsredikellsklgevayvdye.......kgdkegevrFkedeeakkalekatea 60 
                 +++ +++k+++++ gev + d+        k      v +++ e+a++a++ + + 
  KHJ31756.1  99 DVKWHHLKDFMRSAGEVLFADVLllpngmsKVGVYTIVEYATREQAQQAVNTLSNQ 154
                 66678899999999999999974333111133444678999999999999887766 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.062
                 EEEEEESSHHHHHHHHHHH CS
       RRM_3  39 egevrFkedeeakkaleka 57 
                 +g v F+++++a++a+++ 
  KHJ31756.1 253 SGIVAFESSDDARNAIQQF 271
                 799************9875 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0024
                 --HHHHHHHCHCCS.....-ECEEEE-TTSSEEEEEESSHHHHHHHHHHH CS
       RRM_3  13 lsredikellsklg.....evayvdyekgdkegevrFkedeeakkaleka 57 
                 +s ed+ el+  +g     e++y    +   +g vrF+  e+a+ a+ek 
  KHJ31756.1 377 TSNEDLVELFTTIGkveqaEIQYEPNGRSRGTGVVRFDVVESAETAIEKF 426
                 678999999999996655566666666778899**************996 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0    0.0027       5.3      66      94 ..     133     161 ..     126     169 .. 0.87
   2 ?    5.1   0.0    0.0079        16      17     103 ..     356     445 ..     342     463 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0027
       RRM_5  66 talvqmgdasaveravqHLnnaklfgkrl 94 
                 +++v+ +   ++++av+ L+n++l g+ +
  KHJ31756.1 133 YTIVEYATREQAQQAVNTLSNQSLMGRLV 161
                 799*********************99755 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0079
       RRM_5  17 spgaagvaegsVllVyglepdkvnldklFnlfclYgnvervkflkt....kketalvqmgdasaveravqHLnnaklfgkrlevalSKqqa 103
                  +++ g++ +  + V +l  +++n d l  lf+  g ve+  +        ++t +v      ++e+a++ +++ +  g++l + + K q+
  KHJ31756.1 356 DYATVGTERSETIYVRNLPWSTSNED-LVELFTTIGKVEQAEIQYEpngrSRGTGVVRFDVVESAETAIEKFSGYQYGGRPLGLSFVKYQT 445
                 46678899999999****99999966.789*********99987652222568999***99***************99999*999999876 PP

>> GRP  Glycine rich protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       5.6   1.1e+04      65      74 ..      52      61 ..      22      66 .. 0.64
   2 ?   14.6   2.1   2.1e-05     0.041      47      81 ..     175     208 ..     118     223 .. 0.75
   3 ?    6.7  30.2     0.006        12      47      93 ..     290     341 ..     258     345 .. 0.66

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 5.6
         GRP 65 gGGGykgggG 74
                 GGG + g G
  KHJ31756.1 52 VGGGMSVGAG 61
                3555554444 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 2.1e-05
         GRP  47 gggkhggGgygggggggngGGGykgggGgyggggg 81 
                 g   ++++ y gg g g+ GGG  g gG  gg g 
  KHJ31756.1 175 GPPAMNRSTYDGGSGRGHVGGGLGGAGGAPGG-GR 208
                 33445999**************8666665555.43 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.006
         GRP  47 gggkh..ggGgyggggggg...ngGGGykgggGgygggggggeggyGgGygg 93 
                 g+ ++   +Ggygg gg+g   ++ GGy  +gG+ +g  ggg++gyGgGygg
  KHJ31756.1 290 GSSSGfgARGGYGGRGGYGggfGNRGGYASRGGYGNGSYGGGRSGYGGGYGG 341
                 3333344555555555544111334788888777777777778899****98 PP

>> RRM_Rrp7  Rrp7 RRM-like N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.25   5.1e+02      72     105 ..      75     106 ..      69     157 .. 0.64
   2 ?    2.8   0.0     0.047        94      41      70 ..     207     236 ..     202     244 .. 0.84
   3 ?    4.1   0.0     0.018        37      39      67 ..     363     391 ..     357     406 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.25
    RRM_Rrp7  72 esvvsslltdeqedvsidltkltsdlelkdeekd 105
                 e++ ssl++ +q+d  + + +l+ d++   ++ +
  KHJ31756.1  75 EQMLSSLKESSQQDRRVYVGNLSYDVKW--HHLK 106
                 5667888888888888888888888776..3333 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.047
    RRM_Rrp7  41 srslFlvNlPiettletlkkffqkvalgat 70 
                 +r +++ NlP +   + lk  f++ a ++ 
  KHJ31756.1 207 GRQIYVSNLPYTVGWQDLKDLFRQAARNGA 236
                 6899******************99866544 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.018
    RRM_Rrp7  39 essrslFlvNlPiettletlkkffqkval 67 
                 e s+++++ NlP  t+ e l + f ++ +
  KHJ31756.1 363 ERSETIYVRNLPWSTSNEDLVELFTTIGK 391
                 45899*******************99943 PP

>> Vta1_C  Vta1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.0   0.00059       1.2      20      35 ..      67      82 ..      66      82 .. 0.95
   2 ?   -0.9   0.1      0.72   1.4e+03      21      29 ..     262     270 ..     262     272 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00059
      Vta1_C 20 YeDvetAiknLqeALk 35
                YeD+ +A+++++ +Lk
  KHJ31756.1 67 YEDRAQAREQMLSSLK 82
                9*************97 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.72
      Vta1_C  21 eDvetAikn 29 
                 +D ++Ai++
  KHJ31756.1 262 DDARNAIQQ 270
                 8******98 PP

>> THRAP3_BCLAF1  THRAP3/BCLAF1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0  19.1    0.0013       2.6       2      37 ..      17      50 ..      16     101 .. 0.67

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0013
  THRAP3_BCLAF1  2 RSRSRSP...KrRSlSPrsRsrsrysdrsssgrSrrsss 37
                   R RSRSP   +rRS SPrsRsr+    r+ s+  rrs+s
     KHJ31756.1 17 RRRSRSPrsnRRRSFSPRSRSREG---RHISD--RRSRS 50
                   78********************97...55555..33322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (466 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       552  (0.0307881); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3261.92
//
Query:       KHJ31757.1  [L=1120]
Description: putative pre-rrna processing protein utp22 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-62  208.9   0.0    9.4e-62  208.1   0.0    1.3  1  Nrap_D4   Nrap protein nucleotidyltransferase domain 4
    1.9e-53  180.6   2.8    1.7e-52  177.5   1.6    2.3  2  Nrap_D5   Nrap protein PAP/OAS1-like domain 5
    1.7e-52  177.2   0.7    9.1e-47  158.6   0.0    2.5  2  Nrap_D2   Nrap protein PAP/OAS-like domain
    3.3e-47  160.3   1.6    7.5e-47  159.2   1.6    1.6  1  Nrap      Nrap protein domain 1
    4.4e-43  147.1   0.5    1.1e-42  145.9   0.0    1.9  2  Nrap_D3   Nrap protein domain 3
    2.2e-36  125.0   0.8    5.1e-36  123.9   0.1    2.1  2  Nrap_D6   Nrap protein domain 6


Domain annotation for each model (and alignments):
>> Nrap_D4  Nrap protein nucleotidyltransferase domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  208.1   0.0   3.1e-65   9.4e-62      20     212 ..     638     821 ..     629     822 .. 0.97

  Alignments for each domain:
  == domain 1  score: 208.1 bits;  conditional E-value: 3.1e-65
                 --HHHHHHHHHHHHHHHHHHT-.--SS-EEEEEE-SGGGGT--SS---TT.......-.....TTSTEEEEEEE---TTS-SSHHHHHHHHHHHHHHHH CS
     Nrap_D4  20 seeafssvikaFdeLekdlrsLedLPLsirsvqpaspalRytsvfppvpvklsppkaaksskeylepidvvlqfEsSgkWPddleAiqkvKaAFllkia 118
                 ++++++++ +aF++Le ++rsLe+LPL+++++++++p+lRyts+  p+          ++ +++ +p+dv+++fE+SgkWPddl+Aiq+vKa+Fll+i+
  KHJ31757.1 638 DQNQYNALQDAFKSLEVQIRSLEGLPLQVKHLSAVDPQLRYTSILSPSF---------GPGRPMNRPADVLIEFEGSGKWPDDLTAIQRVKASFLLRIG 727
                 67899******************************************99.........78999************************************ PP

                 HHH.HH-TTSEEEEEE-------...EEEEEE-TTS-EEEEEEE-TTHHHHHHHHH...HHS-TTHHHHHHHHHHHHHHHTTHHHHHHHHHHHH CS
     Nrap_D4 119 eeLeekkseikarvgldnssekianqayLdvlkesgfaFrlrilherEltllerqlkdkglakkereeaaealaklerrfvhlprhtsaiaglc 212
                 ++Lee++++ik r+gl+n+++ ++n+++Ldv++ +g +Frlr+++++E+t+lerq+k+k+++++ r ea  al++++r++v+lp++t+ i+  c
  KHJ31757.1 728 KLLEETNKNIKPRLGLENENQYLQNCSFLDVIYLDGPVFRLRVHCDKEQTILERQIKNKSTERHLRDEAVLALSAYKRHYVQLPLLTQSISIHC 821
                 *********************************99*******************************************************9877 PP

>> Nrap_D5  Nrap protein PAP/OAS1-like domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.072   2.2e+02      51      76 ..     376     401 ..     366     428 .. 0.82
   2 !  177.5   1.6   5.6e-56   1.7e-52       2     162 .]     825     980 ..     824     980 .. 0.97

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.072
                 HHHHHHHHHHHHH--TTT--EE---- CS
     Nrap_D5  51 etGFlrvLelLarwdWkeepLivdln 76 
                  + F  +L++L++ d + +p++++ n
  KHJ31757.1 376 FQMFRSFLQFLSKSDLTIKPFVLNKN 401
                 556889*****************987 PP

  == domain 2  score: 177.5 bits;  conditional E-value: 5.6e-56
                 TTHHHHHHHHHHHHHHTT-T.TTS-HHHHHHHHHHHHHS-TTS----SHHHHHHHHHHHHHH--TTT--EE----------HHHHHHHHHHHHHHHHH- CS
     Nrap_D5   2 paysptvrLvkrWlashlLleghvseelvELlvakvFlqpapysvPssaetGFlrvLelLarwdWkeepLivdlnesekltaeeikeietrfealrksd 100
                 p++s+++rLvk Wl+ h+L   h+see++E++va++Fl+p+p+++Pss +t+Flr++ +La+wdW+++pLivd+n  + lt+ +i +i+t++ea+rk+d
  KHJ31757.1 825 PLLSSSIRLVKLWLNHHMLC-RHFSEEIIEMIVARTFLKPHPWQTPSSITTAFLRTIFFLAKWDWRTTPLIVDFN--NILTNVQIGSINTQLEAWRKID 920
                 789***************99.******************************************************..89******************** PP

                 TTSSS----EE-SS-TTS-TTT--HH...HHHHHHHHHHHHHHHHHHH....-SSHHHHTS- CS
     Nrap_D5 101 pamnktalfvatekDkegtlwtkekpskvvaaRltaLAkaalelleekevsekldvkslFtp 162
                 pa n+t+l va+++D +gt+++  +psk++aaR+taLA++a +++++ e   +ld k lFt+
  KHJ31757.1 921 PALNRTVLLVASNHDLSGTAFSAYNPSKMIAARMTALARSASNIVKDME--YELDNKLLFTT 980
                 ***********************************************95..47999999985 PP

>> Nrap_D2  Nrap protein PAP/OAS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.6   0.0     3e-50   9.1e-47       2     152 .]     320     460 ..     319     460 .. 0.94
   2 !   16.4   0.3     2e-06    0.0058       4      82 ..     829     896 ..     827     919 .. 0.88

  Alignments for each domain:
  == domain 1  score: 158.6 bits;  conditional E-value: 3e-50
                 HHHHHHHHHHHHHHTT--SS--TS-S-SHHHHHHHHHHHTSBBSTTS-BSS-TT--HHHHHHHHHHHHHHS--SS-EEEE-------BEEES-.--SS. CS
     Nrap_D2   2 fkdAclLlkvWlrqRgfgssirkaggfggfewamllalllqgggkkgrkklskslssyqlfkavlqfLastdltkkpiflgaskseeskkeseeefska 100
                 fkdAc+L+++WlrqRgf++sir  ggfg+fewa++ a+ll+gg +k+  +ls+++ss+q+f+ +lqfL+++dlt kp++l++++          +++k+
  KHJ31757.1 320 FKDACILGRIWLRQRGFDGSIRG-GGFGHFEWAAMSAILLKGGIPKDFLALSSGYSSFQMFRSFLQFLSKSDLTIKPFVLNKNE---------IGIQKS 408
                 9*********************9.********************************************************6555.........233334 PP

                 ..--EEETTT--BTTTT--HHHHHHHHHHHHHHHHHHT-SSS--HHHHHT-- CS
     Nrap_D2 101 fepvlvdpsgklNllakmtassydlLqqeAketlelLddsssdqFdslFltk 152
                   p+++d+ +++N+l+km+++sy+lL+ eAk+tl++L+d++ d+Fds+F+tk
  KHJ31757.1 409 NTPIFYDSPREHNILFKMSPWSYKLLRLEAKTTLDMLSDNNIDHFDSIFITK 460
                 45************************************************97 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 2e-06
                 HHHHHHHHHHHHTT--SS--TS-S-SHHHHHHHHHHHTSBBSTTS-BSS-TT--HHHHHHHHHHHHHHS--SS-EEEE- CS
     Nrap_D2   4 dAclLlkvWlrqRgfgssirkaggfggfewamllalllqgggkkgrkklskslssyqlfkavlqfLastdltkkpiflg 82 
                 + + L+k+Wl+ + +       + f++ ++ m++a  +      + +  ++  s +  f  ++ fLa++d++++p++++
  KHJ31757.1 829 SSIRLVKLWLNHHMLC------RHFSEEIIEMIVARTF-----LKPHPWQTPSSITTAFLRTIFFLAKWDWRTTPLIVD 896
                 5789************......47************99.....689999**************************9984 PP

>> Nrap  Nrap protein domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.2   1.6   2.5e-50   7.5e-47       1     152 []     178     316 ..     178     316 .. 0.93

  Alignments for each domain:
  == domain 1  score: 159.2 bits;  conditional E-value: 2.5e-50
                 EEEEEE--GGG--TTTTSTTHHHHHHHHHHHHHHHHHHHHHHHTGTEEEEEEEGGG-TT-EEEEEEE---.----GGGTEEEEEEEE--TTSS-GGGGS CS
        Nrap   1 VDlavemPkslfqekDylnlRyfyKRalYLavlaaelskskkkedlvkvsfeylngdelkpiLvirpkkeaekkfskskfririipvapsdlfklskls 99 
                 +D++v mP+s+fq+kDyln+RyfyKRa+YLa+laa+l++s+k  + ++ +fe l+g+el+piL+ rpk        ++ ++iriip+ap++lf+l kl+
  KHJ31757.1 178 IDMIVVMPQSIFQSKDYLNYRYFYKRAYYLAYLAAKLESSSK--ERFEYNFEHLHGNELHPILIARPK------IMSTTYQIRIIPAAPETLFPLPKLR 268
                 8************************************99755..579********************8......7899********************* PP

                 TTS--S----........---------HHHHHHHHHTT-HHHHHHHHHHHHHH CS
        Nrap 100 psknnirvetlkeekesseeeetlppTPlYNssilsdllleehlkllhkakke 152
                 ps+n +r++       +++e ++l++TP+YNss+ sd+ +e+++k+lh+++k+
  KHJ31757.1 269 PSRNSVRPRK-----GNDSEIKELTSTPFYNSSLTSDCNIESYFKFLHATSKN 316
                 *******654.....23477889**************************9985 PP

>> Nrap_D3  Nrap protein domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.9   0.0   3.6e-46   1.1e-42       2     159 ..     465     614 ..     464     615 .. 0.92
   2 ?   -2.6   0.1       1.7   4.9e+03       3      32 ..     983    1011 ..     982    1023 .. 0.54

  Alignments for each domain:
  == domain 1  score: 145.9 bits;  conditional E-value: 3.6e-46
                 HHHSSEEEEEE--HHH-SS---HHHHHHHSSHHHHHHHHHHHHHHHHHGGGEEEEEEEEE.T-EE-TTSSS-BSSS-SEEEEEEEE-TTTTT-SEEEEE CS
     Nrap_D3   2 llkfDlvlriklseekakekkeekekldlseaeeallskvssvlkkaLgdRvkliaikle.eeewsiekkkskeakeskleiglllnpenaerlvdkGP 99 
                 ll+fD+v++i++      ++k +++ +d+   ++++++++++vl+k+L+dRvkli ik++ + +w+i+++  ++  ++++++ +l++p n++rlvd GP
  KHJ31757.1 465 LLRFDYVFSISQG-----SQKFQNTCADHVPEIKNFSNRLYRVLEKGLKDRVKLIYIKEHpSITWPIKSSA-SSIVDESVTVSVLFDPVNVNRLVDYGP 557
                 789*********9.....45567778888999**************************88455****9766.788999********************* PP

                 E-S--HHHHHHHHHHGGGEEEEE-TTS-EEEEEE----SSS...-HHHHHHHHHHHHHT- CS
     Nrap_D3 100 saedkeeaaeFreFWgekselRrFkDGsIlesvvWeksskserrsiveqIvkyiLkrhlk 159
                 sae+  e+aeFr+FWg+k+elRrFkDGsIle++vW+  s++   si+e Iv y+++rh +
  KHJ31757.1 558 SAEEDIESAEFRKFWGQKAELRRFKDGSILETLVWPAGSTQ---SIFETIVLYLVERHWD 614
                 ***********************************877665...9*************75 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.7
                  HHSSEEEEEE--..HHH-SS---HHHHHHHSS CS
     Nrap_D3    3 lkfDlvlrikls..eekakekkeekekldlse 32  
                  +++D v++++ +  +   + +k +++k++l++
  KHJ31757.1  983 IEYDFVIYLSDKytS---NYQKGKSSKVTLKN 1011
                  689*****9999432...33334444444333 PP

>> Nrap_D6  Nrap protein domain 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       3.2   9.6e+03      26      44 ..      39      58 ..      13      95 .. 0.52
   2 !  123.9   0.1   1.7e-39   5.1e-36       2     135 .]     983    1112 ..     982    1112 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 3.2
                ..TB--.------------- CS
     Nrap_D6 26 spgakk.kskfkNlderaes 44
                ++++ + ++ fk +++++  
  KHJ31757.1 39 HSKSPSpERDFKKIHSKQRH 58
                22222235666666665555 PP

  == domain 2  score: 123.9 bits;  conditional E-value: 1.7e-39
                  -S-SEEEEEE-SS--TTTT.......TB---------------GGGGGGS-HHHHHHHHHHHHHTTTEEEEE-S-HHEEEEEEE-GGGSS-EE--TT CS
     Nrap_D6    2 edYDvvihLkpkvlprlseavaekspgakkkskfkNlderaesdkllvkfdpvqllleeLeraygdtllffydklggdvigglwnpsvlkprkfkvn 98  
                   +YD+vi+L+ k+ +++++       g+++k + kNld ++e+   +v+++p+ql+l+eLe  y++t++ff++ l+g+ i+glw+p++l+pr+fkvn
  KHJ31757.1  983 IEYDFVIYLSDKYTSNYQK-------GKSSKVTLKNLDLQSEKILKKVGYHPIQLYLKELETLYSNTIIFFHEMLTGSLIAGLWDPQFLQPRSFKVN 1072
                  58**************866.......33337789*************************************************************** PP

                  --S-EEESSSS.....EEEE-HHHHHHHHHHHHGGGEEEE CS
     Nrap_D6   99 lgystkpvakekk...evelNkeaileeiarlGggLvksi 135 
                  l+yst+  +++++   ev++N+++il+eiarlGg+Lv++i
  KHJ31757.1 1073 LSYSTCVRENNEEpgaEVVINQASILAEIARLGGDLVSKI 1112
                  *****8777776699**********************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.73u 0.26s 00:00:00.99 Elapsed: 00:00:00.42
# Mc/sec: 7938.49
//
Query:       KHJ31758.1  [L=879]
Description: putative glycerol defect protein 1 suppressor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-20   73.1   0.1    3.7e-20   72.0   0.1    1.7  1  MA3       MA3 domain
    9.3e-19   67.9   0.5    9.3e-19   67.9   0.5    3.1  3  MIF4G     MIF4G domain


Domain annotation for each model (and alignments):
>> MA3  MA3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.0   0.1   4.2e-24   3.7e-20       1     112 [.     629     751 ..     629     752 .. 0.93

  Alignments for each domain:
  == domain 1  score: 72.0 bits;  conditional E-value: 4.2e-24
                 HHHHHHHHHHSSS...SHHHHHHHHHHTT--.TTHHHHHHHHHHHHHHS.SS--HHHHHHHHHHHCC-HHHHHHHHHHHHHHHHGGGGS-HH....... CS
         MA3   1 lrrkifliieeylssgdyeeavsklekLklp.kqeheivkillecaleesktyneyygllleklceknlilkkqfekgfwdvlesledleld....... 91 
                 +rr+ifl i+++    dy+ea+  lekL l+ +qe ei+k+l+ c+ +e ++yn+yy l++ klc  n+ +k +f+ ++wd+++ ++  + +       
  KHJ31758.1 629 VRRAIFLAIMSAS---DYQEACAHLEKLRLKkNQEYEIPKVLIRCIAAE-NSYNPYYTLIARKLC-GNRKFKMSFQYCLWDLFKRMDESQANdsdsnae 722
                 59***********...*********************************.***************.********************9999888999999 PP

                 ...........HHHHHHHHHHHHHHTTSS CS
         MA3  92 ........ipeairnlaefvarlisediL 112
                           + + nla+++++l++++ L
  KHJ31758.1 723 evdegtklNSRVLINLAKMYGNLVVQGSL 751
                 99999966666788999999999988766 PP

>> MIF4G  MIF4G domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.11     1e+03      65      94 ..     147     176 ..     139     191 .. 0.76
   2 !   67.9   0.5     1e-22   9.3e-19       2     211 ..     321     525 ..     320     526 .. 0.91
   3 ?    1.0   1.0      0.03   2.7e+02      23     138 ..     650     765 ..     634     802 .. 0.68

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.11
                 HHSHHHHHHHHHHHHHHHHHHHC-S-HHHH CS
       MIF4G  65 srfqqnFrikllnklqeefekryelenele 94 
                 ++++q F+   l+kl+e++e+  + e+e  
  KHJ31758.1 147 KKMPQSFKDDGLDKLLENLESGDDSESERT 176
                 56778999999**********764444443 PP

  == domain 2  score: 67.9 bits;  conditional E-value: 1e-22
                 HHHHHHHHCHTTTTHHHHHHHHHHHHHCS.CHHHHHHHHHHHHHHHHHCG....GGHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC.-S-HHHH CS
       MIF4G   2 kkvkgilnklskenfevlikqllklamdd.dknelkevielifekaveep....sfsplyarlcgklnsrfqqnFrikllnklqeefekry.elenele 94 
                 ++v+g++n+l+ +n+ +++ ++ +l+    +++  +++++++ e ++       + + l a l+ ++++ + ++F++  +++ +   ++ y + + ++ 
  KHJ31758.1 321 RRVQGLINRLTESNLISILGEVENLYRIHpRQDVTSTLLDILLESVCIPTslpdTLIILPAGLITAIYKVIGTDFGAEAVQRIVLLWDEYYaRAIGASS 419
                 89***************************9889999999999998877666668888888888888888888*************99999996666666 PP

                 HHHHHH.HHHHHHHHHHHHHHHHTTSSEHHHHHHHHHHHHHGGCCCCSCCHSCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHCS CS
       MIF4G  95 enedgn.rrrrlglvrflgelfklkmltskilldclkellssltketaddppqdleeieilltllttigktlennekakkeldqffkriqkiledatrq 192
                 +n++ + ++++++l++++ +++ ++++ s+il+d ++ +l++l +           + e+ll++++t+g++l+  +++++ l+ ++  ++++  +  +q
  KHJ31758.1 420 SNFKTElSKETSNLIMLIAMIYIFQVIGSNILFDYIRFILKELSE----------LNTELLLKIIRTCGPQLR--QDDPSSLKDIVVMVRTARAKVMEQ 506
                 666555277899*********************************..........******************..****************999888** PP

                 SSSHHHHHHHHHHHHHHHT CS
       MIF4G 193 elssrirfmlkdlielkkn 211
                 e+s r+rfm++ +++lk+n
  KHJ31758.1 507 EISVRTRFMIETINDLKNN 525
                 ******************9 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.03
                 HHHHHHCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC......-S-HHHHHHHHHHHHHHHHHHHHHHHHH CS
       MIF4G  23 llklamdddknelkevielifekaveepsfsplyarlcgklnsrfqqnFrikllnklqeefekry......eleneleenedgnrrrrlglvrflgelf 115
                 l kl  +  kn+  e+ + ++ +   e s  p+y+ +++kl   ++  F+ ++ ++++ ++ kr       + ++  ee ++g +  ++ l+  l  ++
  KHJ31758.1 650 LEKLRLK--KNQEYEIPKVLIRCIAAENSYNPYYTLIARKLCGNRK--FKMSF-QYCLWDLFKRMdesqanDSDSNAEEVDEGTKLNSRVLIN-LAKMY 742
                 4444444..5888999999999999999999999999999998888..76666.666666666666877765555555555555555554443.56777 PP

                 HTTSSEHHHHHHHHHHHHHGGCC CS
       MIF4G 116 klkmltskilldclkellssltk 138
                  + +++ +  ld+lk++ ++  +
  KHJ31758.1 743 GNLVVQGSLGLDILKNINRDNSN 765
                 77788888888888888777555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (879 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       904  (0.0504211); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.24s 00:00:00.86 Elapsed: 00:00:00.41
# Mc/sec: 6446.65
//
Query:       KHJ31759.1  [L=510]
Description: putative dihydrolipoamide dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.2e-67  226.1   6.9    5.2e-67  226.1   6.9    1.4  2  Pyr_redox_2     Pyridine nucleotide-disulphide oxidoreductase
    7.9e-40  135.5   0.1    2.7e-39  133.8   0.1    2.0  1  Pyr_redox_dim   Pyridine nucleotide-disulphide oxidoreductase
    6.8e-22   77.8   9.8    8.6e-19   67.9   0.5    3.3  3  Pyr_redox       Pyridine nucleotide-disulphide oxidoreductase
    3.6e-11   43.1   2.5    8.5e-07   29.1   0.2    2.7  2  NAD_binding_8   NAD(P)-binding Rossmann-like domain
    4.6e-10   39.1   8.0    1.3e-08   34.3   3.0    2.5  2  GIDA            Glucose inhibited division protein A
    6.4e-10   39.0   6.1    4.3e-09   36.2   0.8    2.3  2  FAD_oxidored    FAD dependent oxidoreductase
    2.6e-07   30.1   9.9    6.5e-07   28.8   2.5    2.4  2  FAD_binding_2   FAD binding domain
    3.6e-07   29.7   2.0     0.0076   15.6   0.1    2.7  3  AlaDh_PNT_C     Alanine dehydrogenase/PNT, C-terminal domain
    3.3e-06   26.5   3.1    7.2e-05   22.1   0.1    2.3  2  Thi4            Thi4 family
      1e-05   24.4  14.6    8.9e-05   21.4   1.7    4.1  4  HI0933_like     HI0933-like protein
    1.4e-05   24.5   7.3     0.0012   18.2   0.1    2.3  2  Pyr_redox_3     Pyridine nucleotide-disulphide oxidoreductase
    0.00064   18.9   3.4     0.0023   17.1   0.1    2.4  2  Lycopene_cycl   Lycopene cyclase protein
     0.0025   17.0   0.7       0.47    9.5   0.0    2.7  3  K_oxygenase     L-lysine 6-monooxygenase (NADPH-requiring)
     0.0061   16.2  22.4       0.03   13.9   4.4    4.2  4  DAO             FAD dependent oxidoreductase
     0.0063   15.8  10.6       0.16   11.2   1.2    3.1  2  FAD_binding_3   FAD binding domain
  ------ inclusion threshold ------
      0.027   14.9   3.4          7    7.2   0.1    3.1  3  NAD_binding_7   Putative NAD(P)-binding
       0.12   10.8   0.6       0.21    9.9   0.6    1.3  1  FMO-like        Flavin-binding monooxygenase-like
        2.2    8.1   6.0        2.4    8.0   0.3    2.7  2  3HCDH_N         3-hydroxyacyl-CoA dehydrogenase, NAD binding 


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.1   6.9   5.2e-70   5.2e-67       1     294 []      46     372 ..      46     372 .. 0.95
   2 ?   -2.9   0.0       3.2   3.2e+03     190     254 ..     408     437 ..     398     462 .. 0.54

  Alignments for each domain:
  == domain 1  score: 226.1 bits;  conditional E-value: 5.2e-70
                  CSEEEE--SHHHHHHHHHHHHHTS-EEEEE....TTHCHHHCSHHHHCHHHHHHHHHHHHH.........................HHHHCHHHHCCC CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxx.........................xxxxxxxxxxxx RF
  Pyr_redox_2   1 kdvvviGgGpAGlaaaltlaqagakvtlve....legtclnggcllskallgvaedaeias.........................evvkklnqgiel 69 
                  kd+v+iGgG+AG+ aa++++q g+kvt++e    l+gtcln+gc++skall+ ++ +++++                           v  l++g+e+
   KHJ31759.1  46 KDLVIIGGGVAGYVAAIKAGQEGLKVTCIEkrgtLGGTCLNVGCIPSKALLNNSHLYHQILhdtkargievsnvklnlaqmmkskdTAVAGLTKGVEF 143
                  589**************************99999************************999*************************889999****** PP

                  CHCCTCEEEEESCEEEEETEEEC.....TCEEEEEESEEEE---EEE-BCTCTTC.TTBEECCSECHHHHHHCCSS-TSEEEEES-SHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  70 llgeevvkidpgkkkvklekkke.....gdeekiaydklvlAtGssprdlgipGvaenvgklvrtldsaealklkllpkrivvvGgGyiGvElAaala 162
                  l +++ v++++g + +  e++++     g e++i  +++++AtGs++  +  pG+    ++  r+++s+ a++l+++p++++v+GgG iG+E+ ++++
   KHJ31759.1 144 LFKKNNVEYIKGTAAFAGEHEVKvnlvdGGEQTIIGKNIIIATGSEATPF--PGL---EIDEKRIITSTGAISLEKVPESMIVIGGGIIGLEMGSVWS 236
                  ***99999999999999999888999999999************999887..999...677789********************************** PP

                  HHT-EEEEEESSSSSS.TTS-HHHHHHHHHHHHHTTEEEEESCEEEEEEETTE....EEE.EEETTSCEEEESEEEE-S-EEES-HHCS.HCCT-EEE CS
                  xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx RF
  Pyr_redox_2 163 klgkevtlveardrll.raldkelsaaleealekeGvevklgtsvkeidgnge....kle.vvledgeeidadlvvvavGvrpstelle.eklgleld 253
                  +lg++vt+ve + ++  +++d e+s+ +++ ++k+G+e+kl+t+v   +  ++    ++e  + +++e++da+ v+va+G+rp t++l+ e++gle d
   KHJ31759.1 237 RLGAKVTVVEYLGQIGgPGMDAEISKSAQRIFKKQGIEFKLNTKVLGGETGHDkislNVEsAKGGNKETLDAEVVLVAIGRRPYTAGLGlENIGLEAD 334
                  *********************************************977776666866555889999999***************************** PP

                  ETTEEE--TTSBESSTTEEE-GGGCTECCSS--HHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 254 erggivvdeflrtnvpgiyaiGDvaggkggpelaqaAvqqG 294
                  e+g++v+d+ +rt++p+i ++GD++    gp+la++A +++
   KHJ31759.1 335 EKGRLVIDSEYRTKIPHIRVVGDCT---FGPMLAHKAEEEA 372
                  *************************...*********9987 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3.2
                  HHHHHHTTEEEEESCEEEEEEETTEEEEEEETTSCEEEESEEEE-S-EEES-HHCSHCCT-EEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 190 eealekeGvevklgtsvkeidgngeklevvledgeeidadlvvvavGvrpstelleeklglelde 254
                  ee+++++Gv+ k gt +  +++                                   +++ +ld+
   KHJ31759.1 408 EEEVKASGVKYKIGTFPFSANS-----------------------------------RAKTNLDS 437
                  3444555555555554433333...................................33333333 PP

>> Pyr_redox_dim  Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.8   0.1   2.7e-42   2.7e-39       1     110 []     391     500 ..     391     500 .. 0.99

  Alignments for each domain:
  == domain 1  score: 133.8 bits;  conditional E-value: 2.7e-42
                    BEEEEESSSEEEEEES-HHHHHHHHSGEEEEEEEEECGHHHCHTTHTEEEEEEEEETTTTBEEEEEEECTTHHHHHHHHHHHHHTTSBHHHHHTSB CS
  Pyr_redox_dim   1 iptvvftdpevasvGlteeeAkaagieikvgkfpfkangralayaetkgfvKlvadaktgkvlGahivGpgageliqelavaikagltvedladti 96 
                    ip+v++t+peva+vG +eee+ka g+++k+g+fpf+an+ra+++ +++g+vK++ada+t+++lG+hi+Gp+age+i+e ++a+++g++ ed+ +t 
     KHJ31759.1 391 IPSVMYTHPEVAWVGQNEEEVKASGVKYKIGTFPFSANSRAKTNLDSEGLVKMIADAETDRILGIHIIGPNAGEMIAEGTLALEYGASSEDIGRTS 486
                    79********************************************************************************************** PP

                    SSSSSTGGGGHCHH CS
  Pyr_redox_dim  97 hihPtlsealkeaa 110
                    h+hPtl+ea+keaa
     KHJ31759.1 487 HAHPTLAEAFKEAA 500
                    ***********985 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.9   5.1e-05     0.051       2      35 ..      48      81 ..      47      86 .. 0.93
   2 ?   -1.0   0.0       2.8   2.8e+03      44      62 ..     139     157 ..     109     171 .. 0.72
   3 !   67.9   0.5   8.7e-22   8.6e-19       2      72 ..     219     290 ..     218     300 .. 0.93

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 5.1e-05
                EEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSS CS
   Pyr_redox  2 vvvvGgGyiglElAgalaelgkkVtvversdkll 35
                +v++GgG+ g  +A  + + g kVt++e + +l 
  KHJ31759.1 48 LVIIGGGVAGYVAAIKAGQEGLKVTCIEKRGTLG 81
                79***************************99886 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.8
                 HHHHHHHHHTTEEEECSEE CS
   Pyr_redox  44 kilqeklekngievllntk 62 
                 k ++  ++kn++e + +t 
  KHJ31759.1 139 KGVEFLFKKNNVEYIKGTA 157
                 4445556777777777665 PP

  == domain 3  score: 67.9 bits;  conditional E-value: 8.7e-22
                 EEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSS.TTSSHHHHHHHHHHHHHTTEEEECSEEEEEEEEETTS CS
   Pyr_redox   2 vvvvGgGyiglElAgalaelgkkVtvversdkll.rllDeeaskilqeklekngievllntkveeiegsedg 72 
                 ++v+GgG iglE+++++++lg+kVtvve   ++  +++D+e+sk  q+ ++k+gie+ lntkv   e+  d+
  KHJ31759.1 219 MIVIGGGIIGLEMGSVWSRLGAKVTVVEYLGQIGgPGMDAEISKSAQRIFKKQGIEFKLNTKVLGGETGHDK 290
                 79*************************************************************999987776 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.2   8.6e-10   8.5e-07       1      37 [.      50      86 ..      50     128 .. 0.86
   2 !   13.4   0.2   6.8e-05     0.068       1      39 [.     221     259 ..     221     276 .. 0.88

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 8.6e-10
                   EE--SHHHHHHHHHHHCCTEEEEEE-SSSSSSGGG-E CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagfdvlllekrdrlGGraas 37
                   I+G+G++G vaA  + ++g++v+++ekr  lGG +  
     KHJ31759.1 50 IIGGGVAGYVAAIKAGQEGLKVTCIEKRGTLGGTCLN 86
                   9********************************9976 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 6.8e-05
                    EE--SHHHHHHHHHHHCCTEEEEEE-SSSSSSGGG-EEC CS
  NAD_binding_8   1 IvGaGlsGlvaAylLakagfdvlllekrdrlGGraasye 39 
                    ++G+G+ Gl + +  ++ g++v+++e   ++GG   ++e
     KHJ31759.1 221 VIGGGIIGLEMGSVWSRLGAKVTVVEYLGQIGGPGMDAE 259
                    8*******************************9766555 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   3.0   1.3e-11   1.3e-08       1     154 [.      47     190 ..      47     214 .. 0.75
   2 !    7.1   0.2    0.0025       2.4       2      32 ..     219     248 ..     218     271 .. 0.86

  Alignments for each domain:
  == domain 1  score: 34.3 bits;  conditional E-value: 1.3e-11
                 CEEEE-SSHHHHHHHHHHHHTT--EEEE...ES-GGGTT--SSSSEEE-TTHHHHHHHHHHHT-SHHHHHHHHEEE..EEEESTTS-CCC-EEEEEE-H CS
        GIDA   1 dviViGgGhAGceAAlaaarlGakvlLi...thkldtiaelsCnpsiggiakgllvrEidalggliikaadkagiq..frilNrskGpavralraqvdr 94 
                 d+++iGgG AG+ AA++a + G+kv+ i       +t+++++C ps   + +++l ++i +     ++ ++ ++++  +  + +sk  av +l ++  +
  KHJ31759.1  47 DLVIIGGGVAGYVAAIKAGQEGLKVTCIekrGTLGGTCLNVGCIPSKALLNNSHLYHQILHD--TKARGIEVSNVKlnLAQMMKSKDTAVAGL-TKGVE 142
                 689*************************88777789**********************9774..44444444444400444557888899888.66667 PP

                 HHHHHHHHHHHHTSTTEEEEES-EEEEEECTTEEEEEEETTS-EEEECEEEE--TT-BT- CS
        GIDA  95 elyskevteklenepnleiieeeveeliveekkvkgvvtedgetikakavviatGtflkg 154
                  l++k+  e+++ +      +e   +l          v   ++ti  k+++iatG+  ++
  KHJ31759.1 143 FLFKKNNVEYIKGTAAFAGEHEVKVNL----------VDGGEQTIIGKNIIIATGS--EA 190
                 788888888888866655554444444..........4578889999999999999..44 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0025
                 EEEE-SSHHHHHHHHHHHHTT--EEEEES-G CS
        GIDA   2 viViGgGhAGceAAlaaarlGakvlLithkl 32 
                 +iViGgG  G+e     +rlGakv+ + + l
  KHJ31759.1 219 MIVIGGGIIGLEMGSVWSRLGAKVTVV-EYL 248
                 69**********************998.444 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.8   4.3e-12   4.3e-09       1      50 [.      47      96 ..      47     188 .. 0.65
   2 !    5.6   0.5    0.0082       8.2       3      36 ..     220     253 ..     219     310 .. 0.95

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 4.3e-12
  FAD_oxidored  1 DvvVvGGgpaGvaAAiaAaraGakvlLveergvlGGlltsglvatdignk 50
                  D+v++GGg+aG++AAi A ++G kv  +e+rg lGG+  + +  +     
    KHJ31759.1 47 DLVIIGGGVAGYVAAIKAGQEGLKVTCIEKRGTLGGTCLNVGCIPSKALL 96
                  99**********************************98877765555544 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0082
  FAD_oxidored   3 vVvGGgpaGvaAAiaAaraGakvlLveergvlGG 36 
                   +V+GGg+ G+       r Gakv +ve  g +GG
    KHJ31759.1 220 IVIGGGIIGLEMGSVWSRLGAKVTVVEYLGQIGG 253
                   8********************************9 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   2.5   6.5e-10   6.5e-07       1      37 [.      47      83 ..      47      86 .. 0.95
   2 !    5.3   0.8    0.0085       8.5       2      36 ..     219     253 ..     218     267 .. 0.91

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 6.5e-10
                   SEEEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGSG CS
  FAD_binding_2  1 DviViGsGlAGLaAAleaaeaGlkvavvekeqefgga 37
                   D+++iG+G+AG++AA++a ++Glkv+++ek +  gg+
     KHJ31759.1 47 DLVIIGGGVAGYVAAIKAGQEGLKVTCIEKRGTLGGT 83
                   89****************************9998886 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0085
                    EEEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGS CS
  FAD_binding_2   2 viViGsGlAGLaAAleaaeaGlkvavvekeqefgg 36 
                     iViG+G+ GL  +   ++ G+kv+vve  ++ gg
     KHJ31759.1 219 MIVIGGGIIGLEMGSVWSRLGAKVTVVEYLGQIGG 253
                    59**************************9998877 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   7.7e-06    0.0076      27      61 ..      44      78 ..      33     111 .. 0.88
   2 !   12.8   0.2   5.2e-05     0.052      28      58 ..     216     246 ..     200     250 .. 0.86
   3 ?   -3.5   0.0       5.2   5.2e+03     127     149 ..     471     493 ..     471     495 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 7.7e-06
                 ---EEEEESTSHHHHHHHHHHHHTT-EEEEEESSH CS
  AlaDh_PNT_C 27 epakvlviGgGvaGlqAiatakglgakVtvlDvrp 61
                 e+   ++iGgGvaG  A+  a + g kVt +++r 
   KHJ31759.1 44 EEKDLVIIGGGVAGYVAAIKAGQEGLKVTCIEKRG 78
                 566789************************99985 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 5.2e-05
                  --EEEEESTSHHHHHHHHHHHHTT-EEEEEE CS
  AlaDh_PNT_C  28 pakvlviGgGvaGlqAiatakglgakVtvlD 58 
                  p  ++viGgG+ Gl+  ++ ++lgakVtv++
   KHJ31759.1 216 PESMIVIGGGIIGLEMGSVWSRLGAKVTVVE 246
                  46789***********************987 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 5.2
                  TTGGGT-SBTT--TBBTTSEEEE CS
  AlaDh_PNT_C 127 vAidqGGnvetsrltthgepvve 149
                  +A + G + e++  t+h++p++ 
   KHJ31759.1 471 LALEYGASSEDIGRTSHAHPTLA 493
                  68999*******99***999875 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.1   7.2e-08   7.2e-05      16      81 ..      44     110 ..      37     152 .. 0.81
   2 ?    4.6   0.4     0.016        16      12      55 ..     212     253 ..     201     276 .. 0.80

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 7.2e-08
                 TEEEEEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--TTTTTTSTTBSEEEEETTT..HHHHHHTT CS
        Thi4  16 aesDvvivGaGssGLtaayylakkpdlkvailersvspGGGawlGGqlfsaivvrkpa..kelLdelg 81 
                  e D+vi+G+G +G  aa   +++ +lkv+ +e++ ++GG     G + s+ ++++    +++L++  
  KHJ31759.1  44 EEKDLVIIGGGVAGYVAAIKAGQE-GLKVTCIEKRGTLGGTCLNVGCIPSKALLNNSHlyHQILHDTK 110
                 689********************9.***************9988888887777765432256666655 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.016
                 HHHHTEEEEEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--T CS
        Thi4  12 llkyaesDvvivGaGssGLtaayylakkpdlkvailersvspGG 55 
                 l k  es ++++G+G  GL  + + ++  + kv+++e    +GG
  KHJ31759.1 212 LEKVPES-MIVIGGGIIGLEMGSVWSRL-GAKVTVVEYLGQIGG 253
                 5555554.678899*************9.********8877777 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   1.7   8.9e-08   8.9e-05       2      36 ..      47      81 ..      46      88 .. 0.92
   2 ?    2.9   0.0     0.036        36     143     171 ..     165     195 ..     103     214 .. 0.77
   3 ?    3.6   1.0     0.022        22       2      36 ..     218     252 ..     217     253 .. 0.89
   4 ?    3.0   0.0     0.033        33     117     166 ..     266     319 ..     257     343 .. 0.79

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 8.9e-08
                 SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS- CS
  HI0933_like  2 dviviGgGaAGlmaAisaakrgkrVlllekakklg 36
                 d+++iGgG AG  aAi+a+++g +V+ +ek  +lg
   KHJ31759.1 47 DLVIIGGGVAGYVAAIKAGQEGLKVTCIEKRGTLG 81
                 89****************************98887 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.036
                  EEEEE...TTEEEEESEEEE----SS-GGGT CS
  HI0933_like 143 frvkt..kseeeleadklvlAtGGlSiPklG 171
                  ++v++   +e+++  +++++AtG+++ P  G
   KHJ31759.1 165 VKVNLvdGGEQTIIGKNIIIATGSEATPFPG 195
                  33333313789999***********999766 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.022
                  SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS- CS
  HI0933_like   2 dviviGgGaAGlmaAisaakrgkrVlllekakklg 36 
                  ++iviGgG  Gl      ++ g++V+++e   ++g
   KHJ31759.1 218 SMIVIGGGIIGLEMGSVWSRLGAKVTVVEYLGQIG 252
                  589*********9999999*********9877776 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.033
                  HHHHHHT-EEE-S--EEEEECETTE.EEEEE......TTEEEEESEEEE----SS CS
  HI0933_like 117 kelkeagvklrletevksvekeedgkfrvktk.....seeeleadklvlAtGGlS 166
                  +  k++g++++l+t+v + e+ +d+ ++++++     ++e+l a+ +++A+G   
   KHJ31759.1 266 RIFKKQGIEFKLNTKVLGGETGHDK-ISLNVEsakggNKETLDAEVVLVAIGRRP 319
                  55789**************988877.77766445677899**********99765 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   3.2    0.0014       1.4       1      32 [.      49      80 ..      49      86 .. 0.87
   2 !   18.2   0.1   1.2e-06    0.0012     120     300 ..     174     351 ..     149     356 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0014
  Pyr_redox_3  1 iIiGaGPaGlaaaielkkagledylilEkg.ni 32
                 +IiG+G aG  aai++ + gl +++ +Ek  ++
   KHJ31759.1 49 VIIGGGVAGYVAAIKAGQEGL-KVTCIEKRgTL 80
                 7********************.69999986455 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 1.2e-06
  Pyr_redox_3 120 ketyeAkkviiAtGefdkPnklnipGeeklvkhyskvk.efhkyagqkvvViGgknSavDaAlelvrkgaeVtvvtrgseiekeesdpsyslkpdien 216
                  ++t+  k++iiAtG  +   +++ +  ek  + +s+   ++ +   + ++ViGg+  + ++     r ga+Vtvv    +i      ++++++   + 
   KHJ31759.1 174 EQTIIGKNIIIATGS-EATPFPGLEIDEK-RIITSTGAiSL-EKVPESMIVIGGGIIGLEMGSVWSRLGAKVTVVEYLGQIGGPG--MDAEISKSAQR 266
                  5678889********.5555688888884.55555544156.566899****************************999998876..55556666665 PP

  Pyr_redox_3 217 rleelvkeekikvlfnaevk..eikekeeeykvkted.gkkvevkddvvla.tGykpdlsf..lkkslfeldedgrpvlteeteetnvpg 300
                   +++    + i++  n++v   e  +++ + +v++++ g+k + + +vvl+ +G +p +    l++ ++e de+gr v+++e   t++p 
   KHJ31759.1 267 IFKK----QGIEFKLNTKVLggETGHDKISLNVESAKgGNKETLDAEVVLVaIGRRPYTAGlgLENIGLEADEKGRLVIDSEYR-TKIPH 351
                  5554....44788888877611445555566666444144555566666555****9876535788999*******99998864.55555 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   2.3e-06    0.0023       1     141 [.      47     188 ..      47     199 .. 0.74
   2 ?    1.8   0.6     0.099        99       2      31 ..     219     246 ..     218     253 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 2.3e-06
  Lycopene_cycl   1 DvvviGaGpAglslAarlteakpglkvvlieaspsllfpnnyvWsdefedlgaleecvehsWsgtivylddgkkillgraYgrvsskr.....lke 91 
                    D+v+iG+G Ag   A +    + glkv++ie    l  +   v +   ++l +  ++ ++  ++t  +  + ++++l++a ++++sk+     l +
     KHJ31759.1  47 DLVIIGGGVAGYVAAIKA--GQEGLKVTCIEKRGTLGGTCLNVGCIPSKALLNNSHLYHQILHDTKARGIEVSNVKLNLA-QMMKSKDtavagLTK 139
                    9************99999..**********99888866666699999999887666666666777777777777777744.444444422222566 PP

  Lycopene_cycl  92 ellerlvengvklleakvesveeeeageslvvleggrkirarlvvdargl 141
                     ++  + +n+v++ +++++ + e+e+ ++  v  g+++i ++ ++ a+g 
     KHJ31759.1 140 GVEFLFKKNNVEYIKGTAAFAGEHEV-KVNLVDGGEQTIIGKNIIIATGS 188
                    66666679999999999998888888.66666555669999999999993 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.099
  Lycopene_cycl   2 vvviGaGpAglslAarlteakpglkvvlie 31 
                    ++viG+G  gl +      ++ g kv+++e
     KHJ31759.1 219 MIVIGGGIIGLEMGSVW--SRLGAKVTVVE 246
                    69***********9988..99999999997 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.99   9.8e+02     188     203 ..      42      57 ..      20      78 .. 0.74
   2 !    9.5   0.0   0.00047      0.47     114     205 ..     142     230 ..     132     245 .. 0.72
   3 ?    4.6   0.0     0.015        15     288     339 ..     266     316 ..     261     321 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.99
  K_oxygenase 188 llakkriaVvGsGqSa 203
                  ++++k+++++G+G  +
   KHJ31759.1  42 EAEEKDLVIIGGGVAG 57 
                  5677888888888655 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00047
  K_oxygenase 114 rfgeeveevepdeeeee..elltveskdaegeeeelearnlvlgvGtepkiPevleklegkervvHsseylerkeellakkriaVvGsGqSaae 205
                  +f  + ++ve+ + +       +v+++  +g e+++  +n+++++G+e++ P    +++ ++r++ s  + + +   + +++++V+G+G  + e
   KHJ31759.1 142 EFLFKKNNVEYIKGTAAfaGEHEVKVNLVDGGEQTIIGKNIIIATGSEAT-PFPGLEID-EKRIITSTGAISLE---KVPESMIVIGGGIIGLE 230
                  554444555555544443344677776699****************9986.44444466.48999988877665...7899********87766 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.015
  K_oxygenase 288 kvkgeerlrllpnrevesaeaegkgeveltlrneesgeeetlevdavvlATG 339
                  ++ +++ ++++ n++v + e  ++ ++ l+++  + g++etl++++v++A G
   KHJ31759.1 266 RIFKKQGIEFKLNTKVLGGETGHD-KISLNVESAKGGNKETLDAEVVLVAIG 316
                  555666677777888887777765.899999999999999999999999887 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   4.4     3e-05      0.03       1      36 [.      47      83 ..      47     111 .. 0.91
   2 ?    4.0   0.1     0.031        31     148     207 ..     137     193 ..     128     212 .. 0.71
   3 ?    3.4   3.5     0.048        48       3      27 ..     220     246 ..     218     253 .. 0.87
   4 ?    3.7   0.1     0.039        39     153     201 ..     265     316 ..     257     340 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3e-05
                EEEEECTSHHHHHHHHHHHHTT..EEEEESSSSTTSSG CS
         DAO  1 dvviiGGGiiGlstAyeLarrg..Vtllekgdiagsga 36
                d+viiGGG++G  +A  + ++g  Vt +ek+  +g g+
  KHJ31759.1 47 DLVIIGGGVAGYVAAIKAGQEGlkVTCIEKRGTLG-GT 83
                89****************9999*********7777.54 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.031
                 HHHHHHHHHHHTT-EEEESECEEEEEEEETCEEEEEEECT.EEEEEEEE.EEE--GGGHHHH CS
         DAO 148 ltaalaraaealGveilegtevtgleeedgkvwgverttp.gendaada.vVnaaGawsdll 207
                 lt+++   ++++ ve ++gt + + e+e    ++v +  + ge++++ + +++a+G  ++ +
  KHJ31759.1 137 LTKGVEFLFKKNNVEYIKGTAAFAGEHE----VKV-NLVDgGEQTIIGKnIIIATGSEATPF 193
                 6777777899999999999999988653....344.34455777544555******998755 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.048
                 EEECTSHHHHHHHHHHHHTT..EEEEE CS
         DAO   3 viiGGGiiGlstAyeLarrg..Vtlle 27 
                 ++iGGGiiGl      +r g  Vt++e
  KHJ31759.1 220 IVIGGGIIGLEMGSVWSRLGakVTVVE 246
                 8*********99999888888899988 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.039
                 HHHHHHTT-EEEESECEEEEEEEETCEEEEE...EECTEEE.EEEEE..EEE--G CS
         DAO 153 araaealGveilegtevtgleeedgkvwgve...rttpgen.daada..vVnaaG 201
                 +r ++++G+e+ ++t+v g e   +k   +    + ++g n ++ da  v +a G
  KHJ31759.1 265 QRIFKKQGIEFKLNTKVLGGETGHDK---ISlnvESAKGGNkETLDAevVLVAIG 316
                 56699**************9663233...22333333444436566664777766 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   1.2   0.00016      0.16       3      35 ..      47      79 ..      45      83 .. 0.92
   2 !    7.5   2.5    0.0022       2.2       5     120 ..     220     373 ..     217     390 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00016
                   EEEEE--SHHHHHHHHHHHHTTHHEEEEESSSS CS
  FAD_binding_3  3 dVlIVGaGpaGlmlallLseaGvrvvlvekrst 35
                   d +I+G+G aG ++a    + G +v+++ekr t
     KHJ31759.1 47 DLVIIGGGVAGYVAAIKAGQEGLKVTCIEKRGT 79
                   678***************************976 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0022
                    EEE--SHHHHHHHHHHHHTTHHEEEEESSSSSCCSSS--EEEHHHHHHHHHTT-HHHHHHHSEECCCCEEEEEEE..................... CS
  FAD_binding_3   5 lIVGaGpaGlmlallLseaGvrvvlvekrsttvvlpradglnqrtmellrqlGledrilaegapnelmgealyne..................... 79 
                    +++G+G  Gl  +++ s+ G +v++ve   +    +    +++   +++++ G+e ++  +    e+ ++  + +                     
     KHJ31759.1 220 IVIGGGIIGLEMGSVWSRLGAKVTVVEYLGQIGGPGMDAEISKSAQRIFKKQGIEFKLNTKVLGGETGHDKISLNvesakggnketldaevvlvai 315
                    79*************************998887777777777888888888888887777665555544444444556678888888888887776 PP

                    ..........CCCC.....CEEEEEHH..CHHCST-CEE--HHHHHHHHHHHHHHHTE CS
  FAD_binding_3  80 ..........lsdt.....pkaradle..lesspervtvypqteleriLvehaeergl 120
                              l+++     +k r+ ++   +++ +++ v++   + ++L+++aee+++
     KHJ31759.1 316 grrpytaglgLENIgleadEKGRLVIDseYRTKIPHIRVVGDCTFGPMLAHKAEEEAV 373
                    6666665555222255555444444443366888888888888888888888887773 PP

>> NAD_binding_7  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.5     0.011        11       3      38 ..      41      76 ..      39      80 .. 0.90
   2 ?   -1.4   0.0       3.2   3.2e+03      68      91 ..      95     118 ..      86     128 .. 0.86
   3 ?    7.2   0.1     0.007         7       9      37 ..     218     246 ..     211     322 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.011
  NAD_binding_7  3 ldlkgkkvlvvGgGevAarkvrklleagakvtvvap 38
                   ++ ++k  +++GgG  ++  + k  ++g kvt + +
     KHJ31759.1 41 TEAEEKDLVIIGGGVAGYVAAIKAGQEGLKVTCIEK 76
                   567899**************************9876 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 3.2
  NAD_binding_7  68 atddrelneriaeaakarrilvnv 91 
                      ++ +l ++i ++ kar+i v  
     KHJ31759.1  95 LLNNSHLYHQILHDTKARGIEVSN 118
                    568899999*******99997765 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.007
  NAD_binding_7   9 kvlvvGgGevAarkvrklleagakvtvva 37 
                    +++v+GgG ++++  +   + gakvtvv 
     KHJ31759.1 218 SMIVIGGGIIGLEMGSVWSRLGAKVTVVE 246
                    789************************74 PP

>> FMO-like  Flavin-binding monooxygenase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.6   0.00021      0.21       2      38 ..      46      82 ..      45      86 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00021
    FMO-like  2 kkvaviGaGvsGlasikccleegleptcfersddiGG 38
                k + +iG+Gv+G ++     +egl+ tc e+   +GG
  KHJ31759.1 46 KDLVIIGGGVAGYVAAIKAGQEGLKVTCIEKRGTLGG 82
                7789********8665556699************999 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   1.1       0.2     2e+02       3      30 ..      49      76 ..      47      85 .. 0.91
   2 ?    8.0   0.3    0.0024       2.4       4      53 ..     221     271 ..     218     299 .. 0.74

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.2
                EEE--SCCHHHHHHHHHHTT-EEEEE-S CS
     3HCDH_N  3 aviGaGtmGagiaavfasagleVvlvdi 30
                 +iG G+ G   a  + ++gl+V+ ++ 
  KHJ31759.1 49 VIIGGGVAGYVAAIKAGQEGLKVTCIEK 76
                69**********************9986 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0024
                 EE--SCCHHHHHHHHHHTT-EEEEE-S-HHHHHHHH.HHHHHHHHCCTTTT CS
     3HCDH_N   4 viGaGtmGagiaavfasagleVvlvdiseealekal.ekieksleklvekg 53 
                 viG G++G ++ +v  + g +V++v+   ++   ++ ++i+ks ++  +k+
  KHJ31759.1 221 VIGGGIIGLEMGSVWSRLGAKVTVVEYLGQIGGPGMdAEISKSAQRIFKKQ 271
                 9************************98555544443134555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       494  (0.0275531); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 3450.26
//
Query:       KHJ31760.1  [L=494]
Description: hypothetical protein EV44_g0469 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-22   77.7   2.6    5.2e-20   71.3   1.1    2.8  2  DnaJ      DnaJ domain
    5.8e-11   41.6   9.4      0.031   14.4   0.3    7.5  8  TPR_2     Tetratricopeptide repeat
    6.1e-10   38.5   8.5     0.0067   16.2   0.0    6.4  7  TPR_1     Tetratricopeptide repeat
    7.5e-10   38.8   0.1    3.6e-05   23.8   0.0    4.8  5  TPR_9     Tetratricopeptide repeat
    9.7e-09   34.8   8.1      0.011   15.9   0.0    7.1  8  TPR_8     Tetratricopeptide repeat
      3e-08   33.8   2.0      0.039   14.8   0.2    4.9  4  TPR_14    Tetratricopeptide repeat
      5e-06   26.1   9.6    7.4e-05   22.3   2.8    3.6  4  TPR_11    TPR repeat
    1.1e-05   25.8  10.4      0.043   14.3   0.3    4.3  5  TPR_19    Tetratricopeptide repeat
    5.5e-05   23.5   7.8       0.42   11.3   0.1    6.0  6  TPR_6     Tetratricopeptide repeat
    0.00045   20.4   0.4    0.00045   20.4   0.4    3.6  3  TPR_17    Tetratricopeptide repeat
    0.00059   20.0  11.5       0.25   11.6   0.9    5.0  5  ANAPC3    Anaphase-promoting complex, cyclosome, subunit 3
     0.0006   20.4   9.2      0.014   16.0   1.7    4.0  3  TPR_16    Tetratricopeptide repeat
     0.0032   16.3   0.2      0.027   13.2   0.0    2.4  3  PknG_TPR  Protein kinase G tetratricopeptide repeat
  ------ inclusion threshold ------
       0.02   14.4   1.8       0.17   11.4   0.5    2.2  2  DUF4619   Domain of unknown function (DUF4619)
       0.12   12.2   0.2       0.24   11.2   0.2    1.4  1  SAVED     SMODS-associated and fused to various effectors sen


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.027        33      25      37 ..     354     366 ..     332     378 .. 0.74
   2 !   71.3   1.1   4.4e-23   5.2e-20       1      63 []     382     448 ..     382     448 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.027
                 HHHHSTTTSCCHH CS
        DnaJ  25 alkyHPDknpkdp 37 
                 a kyHPD  + + 
  KHJ31760.1 354 ASKYHPDSDEIND 366
                 88*****873333 PP

  == domain 2  score: 71.3 bits;  conditional E-value: 4.4e-23
                 HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTS....CCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ   1 dyYeiLgvskdasedeIkkaYrklalkyHPDkn....pkdpeaeekFkeineAyevLsdpekRkqYD 63 
                 dyY++Lg+s+da++ +Ik+aYr+l++ +HPDk      +++eae+k   +neAyevLsdpe ++++D
  KHJ31760.1 382 DYYKVLGLSRDADDLQIKSAYRRLVKIHHPDKAhrqgISKEEAERKMAAVNEAYEVLSDPELKRRFD 448
                 8******************************98554444449999*******************999 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.3   2.6e-05     0.031       7      34 .]      41      68 ..      36      68 .. 0.89
   2 !   13.2   0.0   6.1e-05     0.072       3      33 ..      71     101 ..      69     102 .. 0.94
   3 ?    4.2   0.1     0.047        57       6      25 ..     108     127 ..     105     128 .. 0.90
   4 ?   -2.1   0.1       4.8   5.7e+03       4      20 ..     129     145 ..     126     155 .. 0.60
   5 ?    0.9   0.0      0.52   6.2e+02       7      30 ..     182     205 ..     180     208 .. 0.91
   6 ?   -0.8   0.0         2   2.3e+03      10      33 ..     220     243 ..     218     244 .. 0.83
   7 ?    2.2   0.0      0.21   2.5e+02      14      31 ..     307     324 ..     306     326 .. 0.91
   8 ?    4.1   0.0     0.052        63       7      33 ..     334     360 ..     331     361 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.6e-05
       TPR_2  7 lGlayyklgdyeeAleafekAleldPnn 34
                 ++ ++++g+ ++Al+++++A++ dP+n
  KHJ31760.1 41 SANKHLANGETNDALAYYDAAISRDPQN 68
                58889*********************97 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 6.1e-05
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPn 33 
                  ++ +G ay+ lg+  +A+++f+ +l++ P+
  KHJ31760.1  71 TYFKRGAAYLSLGKSLQAKADFDHVLSIKPG 101
                 69**************************996 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.047
       TPR_2   6 nlGlayyklgdyeeAleafe 25 
                 +++++ ++lgd+e  ++++ 
  KHJ31760.1 108 QRAKINAQLGDWEASKKDYL 127
                 689999***********995 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 4.8
       TPR_2   4 lynlGlayyklgdyeeA 20 
                 + nl+  +++l + + A
  KHJ31760.1 129 HGNLASELAQLEEAKGA 145
                 55666666666655555 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.52
       TPR_2   7 lGlayyklgdyeeAleafekAlel 30 
                 ++ + +++g+ ++ +++++ +l+l
  KHJ31760.1 182 RAHCRFENGEIQDGINDLKHVLQL 205
                 78999*****************98 PP

  == domain 6  score: -0.8 bits;  conditional E-value: 2
       TPR_2  10 ayyklgdyeeAleafekAleldPn 33 
                 + y+l d+++ ++ ++k+l  dP+
  KHJ31760.1 220 LFYELADFNRGVDQMRKCLHFDPE 243
                 568888999999999999999997 PP

  == domain 7  score: 2.2 bits;  conditional E-value: 0.21
       TPR_2  14 lgdyeeAleafekAleld 31 
                 ++++++ + ++++Ale++
  KHJ31760.1 307 QNNLQKGRSWCDEALEYN 324
                 7899************98 PP

  == domain 8  score: 4.1 bits;  conditional E-value: 0.052
       TPR_2   7 lGlayyklgdyeeAleafekAleldPn 33 
                 ++++ + + +ye A++ ++ A ++ P+
  KHJ31760.1 334 RAQSQISNEQYESAIRILNDASKYHPD 360
                 8999999************99999997 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.2   8.6e-06      0.01       8      34 .]      42      68 ..      36      68 .. 0.91
   2 !   16.2   0.0   5.6e-06    0.0067       3      34 .]      71     102 ..      69     102 .. 0.94
   3 ?    1.0   0.0      0.35   4.2e+02       7      24 ..     109     126 ..     107     128 .. 0.89
   4 ?   -1.9   0.0       2.9   3.5e+03       3      15 ..     128     140 ..     126     143 .. 0.74
   5 ?    2.9   0.0     0.091   1.1e+02       7      31 ..     182     206 ..     178     208 .. 0.92
   6 ?   -0.8   0.0       1.3   1.5e+03      15      31 ..     308     324 ..     306     326 .. 0.71
   7 ?    0.2   0.0      0.62   7.4e+02       7      25 ..     334     352 ..     332     361 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 8.6e-06
                HHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  8 GnayfklgkydeAleyyekALelnPnn 34
                +n ++ +g+ ++Al+yy+ A++ +P+n
  KHJ31760.1 42 ANKHLANGETNDALAYYDAAISRDPQN 68
                788999*******************97 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 5.6e-06
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPnn 34 
                 +++ +G+ay++lgk  +A ++++ +L++ P +
  KHJ31760.1  71 TYFKRGAAYLSLGKSLQAKADFDHVLSIKPGF 102
                 799**************************975 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.35
                 HHHHHHHTT-HHHHHHHH CS
       TPR_1   7 lGnayfklgkydeAleyy 24 
                 ++ +  +lg+++   ++y
  KHJ31760.1 109 RAKINAQLGDWEASKKDY 126
                 788999********9999 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 2.9
                 HHHHHHHHHHHTT CS
       TPR_1   3 alynlGnayfklg 15 
                 a+ nl+  + +l+
  KHJ31760.1 128 AHGNLASELAQLE 140
                 7888888887775 PP

  == domain 5  score: 2.9 bits;  conditional E-value: 0.091
                 HHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   7 lGnayfklgkydeAleyyekALeln 31 
                 ++++ f++g+ ++ + + + +L+l 
  KHJ31760.1 182 RAHCRFENGEIQDGINDLKHVLQLK 206
                 89********************996 PP

  == domain 6  score: -0.8 bits;  conditional E-value: 1.3
                 T-HHHHHHHHHHHHHHS CS
       TPR_1  15 gkydeAleyyekALeln 31 
                 +++++    +++ALe n
  KHJ31760.1 308 NNLQKGRSWCDEALEYN 324
                 66666667788888876 PP

  == domain 7  score: 0.2 bits;  conditional E-value: 0.62
                 HHHHHHHTT-HHHHHHHHH CS
       TPR_1   7 lGnayfklgkydeAleyye 25 
                 +++   ++++y+ A+   +
  KHJ31760.1 334 RAQSQISNEQYESAIRILN 352
                 788889999*****97555 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0     3e-08   3.6e-05       5      71 ..      45     115 ..      43     116 .. 0.87
   2 ?    5.0   0.0     0.023        27      34      51 ..     108     125 ..     103     142 .. 0.88
   3 ?    5.0   0.0     0.022        26      10      59 ..     157     206 ..     149     215 .. 0.82
   4 ?   -0.0   0.0      0.85     1e+03      36      62 ..     218     244 ..     217     253 .. 0.88
   5 ?   -1.2   0.0       1.9   2.3e+03       6      27 ..     339     360 ..     332     366 .. 0.70

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 3e-08
       TPR_9   5 aireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalap....dapdaeairaq 71 
                 ++ + +   ala+++  +  +P+    ++ RG ++  lG   +A ad+++ l++ p    +  +++ i aq
  KHJ31760.1  45 HLANGETNDALAYYDAAISRDPQNYLTYFKRGAAYLSLGKSLQAKADFDHVLSIKPgfegATIQRAKINAQ 115
                 677888899***********************************************886555555555555 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.023
       TPR_9  34 dRGlllaqlGclsaAlad 51 
                  R+ ++aqlG+++a  +d
  KHJ31760.1 108 QRAKINAQLGDWEASKKD 125
                 69************9988 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.022
       TPR_9  10 dweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylala 59 
                 +we++   +   +++a++   +r  R+ ++++ G ++ +++dL + l+l 
  KHJ31760.1 157 NWEQCVVQSTKAIMVASKVLNLRKIRAHCRFENGEIQDGINDLKHVLQLK 206
                 5555555566677888889999999********************99875 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 0.85
       TPR_9  36 GlllaqlGclsaAladLeaylalapda 62 
                 + l ++l +++ +++ +  +l+ +p+ 
  KHJ31760.1 218 ATLFYELADFNRGVDQMRKCLHFDPES 244
                 5689999***************99986 PP

  == domain 5  score: -1.2 bits;  conditional E-value: 1.9
       TPR_9   6 ireedweralavverllllaPd 27 
                 i++e++e a+++++     +Pd
  KHJ31760.1 339 ISNEQYESAIRILNDASKYHPD 360
                 6778888888877766666665 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.1    0.0019       2.3      11      34 .]      45      68 ..      35      68 .. 0.85
   2 !   15.9   0.0   8.8e-06     0.011       4      32 ..      72     100 ..      70     102 .. 0.95
   3 ?    1.0   0.1      0.54   6.4e+02       7      25 ..     109     127 ..     107     128 .. 0.87
   4 ?    1.4   0.2      0.41   4.9e+02       4      21 ..     126     143 ..     126     155 .. 0.82
   5 ?   -2.6   0.0       7.6   9.1e+03       8      31 ..     183     206 ..     182     207 .. 0.82
   6 ?   -0.2   0.0       1.3   1.5e+03      10      33 ..     220     243 ..     214     244 .. 0.83
   7 ?   -1.7   0.0         4   4.8e+03      15      32 ..     308     325 ..     306     326 .. 0.79
   8 ?    4.4   0.0     0.043        51       6      32 ..     333     359 ..     331     361 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0019
                HHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8 11 ylklgdyeeAkeyyekaleldpdn 34
                +l  g+ + A +yy  a++ dp+n
  KHJ31760.1 45 HLANGETNDALAYYDAAISRDPQN 68
                677899****************96 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 8.8e-06
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAkeyyekaleldp 32 
                 y++ g +yl+lg+  +Ak+ + ++l+++p
  KHJ31760.1  72 YFKRGAAYLSLGKSLQAKADFDHVLSIKP 100
                 9***************************9 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.54
                 HHHHHHHTT-HHHHHHHHH CS
       TPR_8   7 lgsiylklgdyeeAkeyye 25 
                  ++i  +lgd e++k+ y 
  KHJ31760.1 109 RAKINAQLGDWEASKKDYL 127
                 789999**********995 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.41
                 HHHHHHHHHHTT-HHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAk 21 
                 y+  g++ ++l ++eeAk
  KHJ31760.1 126 YLAHGNLASELAQLEEAK 143
                 677899999999999998 PP

  == domain 5  score: -2.6 bits;  conditional E-value: 7.6
                 HHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8   8 gsiylklgdyeeAkeyyekaleld 31 
                 +++ ++ g+++  +  ++++l+l+
  KHJ31760.1 183 AHCRFENGEIQDGINDLKHVLQLK 206
                 667788899999999999999986 PP

  == domain 6  score: -0.2 bits;  conditional E-value: 1.3
                 HHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  10 iylklgdyeeAkeyyekaleldpd 33 
                 +  +l d++  +  ++k+l  dp+
  KHJ31760.1 220 LFYELADFNRGVDQMRKCLHFDPE 243
                 66789999999999****988886 PP

  == domain 7  score: -1.7 bits;  conditional E-value: 4
                 T-HHHHHHHHHHHHHHHH CS
       TPR_8  15 gdyeeAkeyyekaleldp 32 
                 +++++  +++ +ale+++
  KHJ31760.1 308 NNLQKGRSWCDEALEYNK 325
                 677888889999999886 PP

  == domain 8  score: 4.4 bits;  conditional E-value: 0.043
                 HHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyyekaleldp 32 
                 + ++  ++ ++ye+A+  ++ a ++ p
  KHJ31760.1 333 LRAQSQISNEQYESAIRILNDASKYHP 359
                 568889999***********9998766 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.2   3.2e-05     0.039       7      40 ..      41      74 ..      35      78 .. 0.82
   2 ?    3.6   0.0      0.13   1.5e+02       4      43 ..      72     111 ..      70     112 .. 0.91
   3 ?   -0.7   0.0         3   3.6e+03       3      21 ..     105     123 ..     103     129 .. 0.82
   4 !   11.9   0.0   0.00027      0.32       5      38 ..     332     365 ..     329     373 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 3.2e-05
      TPR_14  7 laeallalGdpdeAiallrralalaPddaeawll 40
                 a  +la+G++ +A+a++++a++++P++  +++ 
  KHJ31760.1 41 SANKHLANGETNDALAYYDAAISRDPQNYLTYFK 74
                4555899********************9888765 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.13
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 + ++++a+l lG+  +A a ++ +l+  P+++ a ++ a+
  KHJ31760.1  72 YFKRGAAYLSLGKSLQAKADFDHVLSIKPGFEGATIQRAK 111
                 56899***************************99999887 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 3
      TPR_14   3 allalaeallalGdpdeAi 21 
                 a+ ++a++ ++lGd++++ 
  KHJ31760.1 105 ATIQRAKINAQLGDWEASK 123
                 67789999******99875 PP

  == domain 4  score: 11.9 bits;  conditional E-value: 0.00027
      TPR_14   5 lalaeallalGdpdeAiallrralalaPddaeaw 38 
                 l++a+    +++++ Ai++l++a + +Pd++e++
  KHJ31760.1 332 LLRAQSQISNEQYESAIRILNDASKYHPDSDEIN 365
                 5688999999***************9****9986 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   2.8   6.2e-08   7.4e-05       2      42 .]      43      83 ..      42      83 .. 0.93
   2 ?   -2.4   0.1       3.3     4e+03       5      17 ..     114     126 ..     111     128 .. 0.80
   3 ?   -1.5   0.0       1.7     2e+03       5      24 ..     187     206 ..     185     213 .. 0.89
   4 ?    5.4   0.4     0.012        14       7      31 ..     341     365 ..     337     375 .. 0.86

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 6.2e-08
      TPR_11  2 dayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykqG 42
                +   + G+ ++A++ Y +A+  dP+n   y+++G+ay+ +G
  KHJ31760.1 43 NKHLANGETNDALAYYDAAISRDPQNYLTYFKRGAAYLSLG 83
                566789*******************************9998 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 3.3
      TPR_11   5 yeqGkyeeAieaY 17 
                  ++G++e++ ++Y
  KHJ31760.1 114 AQLGDWEASKKDY 126
                 589****998887 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.7
      TPR_11   5 yeqGkyeeAieaYkkAlkld 24 
                 +e G++ + i+++k  l+l+
  KHJ31760.1 187 FENGEIQDGINDLKHVLQLK 206
                 89999*999*****999997 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.012
      TPR_11   7 qGkyeeAieaYkkAlkldPdnaeay 31 
                   +ye Ai  ++ A k+ Pd+ e+ 
  KHJ31760.1 341 NEQYESAIRILNDASKYHPDSDEIN 365
                 679******************9997 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   1.1   0.00011      0.13       2      45 ..      46      89 ..      45      90 .. 0.93
   2 ?    3.5   0.0     0.086     1e+02       9      45 ..      87     123 ..      83     124 .. 0.89
   3 ?   -3.0   0.2       9.5   1.1e+04      33      45 ..     131     143 ..     126     145 .. 0.69
   4 ?   -1.6   0.0       3.4   4.1e+03       2      26 ..     187     211 ..     186     227 .. 0.67
   5 !   14.3   0.3   3.6e-05     0.043      13      61 ..     316     364 ..     305     379 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00011
      TPR_19  2 laegdyaeAlalleqalqedpknaearllLAeallalgqldeAe 45
                la+g   +Ala++ +a++ dp+n         a+l+lg   +A+
  KHJ31760.1 46 LANGETNDALAYYDAAISRDPQNYLTYFKRGAAYLSLGKSLQAK 89
                899**********************************9988887 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.086
      TPR_19   9 eAlalleqalqedpknaearllLAeallalgqldeAe 45 
                 +A a +  +l+ +p+ + a ++ A++  +lg++++ +
  KHJ31760.1  87 QAKADFDHVLSIKPGFEGATIQRAKINAQLGDWEASK 123
                 79999999************************99765 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 9.5
      TPR_19  33 eallalgqldeAe 45 
                 ++  +l ql+eA+
  KHJ31760.1 131 NLASELAQLEEAK 143
                 5666778888887 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 3.4
      TPR_19   2 laegdyaeAlalleqalqedpknae 26 
                 +++g  ++ ++ l+ +lq + ++ e
  KHJ31760.1 187 FENGEIQDGINDLKHVLQLKSGMIE 211
                 5789999999999999999665433 PP

  == domain 5  score: 14.3 bits;  conditional E-value: 3.6e-05
      TPR_19  13 lleqalqedpknaearllLAeallalgqldeAealLdalpeedpddary 61 
                    +al+++  +++  ll A+ ++++ q++ A+++L+++ +  pd+ ++
  KHJ31760.1 316 WCDEALEYNKFSLYGSLLRAQSQISNEQYESAIRILNDASKYHPDSDEI 364
                 5667888888888889999999999999999999999999999997655 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.1    0.0091        11      10      32 ..      45      67 ..      36      68 .. 0.79
   2 ?    3.3   0.0      0.13   1.5e+02       3      24 ..      72      93 ..      71      98 .. 0.86
   3 ?   -2.0   0.1       6.2   7.4e+03       6      21 ..     109     124 ..     108     127 .. 0.76
   4 ?   -1.5   0.0       4.3   5.1e+03       7      32 ..     218     243 ..     216     244 .. 0.78
   5 !   11.3   0.1   0.00035      0.42       4      33 .]     332     361 ..     329     361 .. 0.91
   6 ?    0.5   0.0         1   1.2e+03      18      29 ..     397     408 ..     370     412 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0091
                HHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6 10 yrklgdtdkAlealerlikeYPd 32
                +++ g+t +Al++++  i++ P+
  KHJ31760.1 45 HLANGETNDALAYYDAAISRDPQ 67
                56668***************998 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.13
                HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6  3 lyklalsyrklgdtdkAleale 24
                ++k++ +y++lg++ +A++ ++
  KHJ31760.1 72 YFKRGAAYLSLGKSLQAKADFD 93
                799*******99**9**99876 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 6.2
                 HHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAle 21 
                 +a+   +lgd++++++
  KHJ31760.1 109 RAKINAQLGDWEASKK 124
                 577778889**99887 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 4.3
                 HHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   7 alsyrklgdtdkAlealerlikeYPd 32 
                 a ++++l d  + ++ +++++   P+
  KHJ31760.1 218 ATLFYELADFNRGVDQMRKCLHFDPE 243
                 77889966999999999998876665 PP

  == domain 5  score: 11.3 bits;  conditional E-value: 0.00035
                 HHHHHHHHHHHHHHHHHHHHHHHHHH-TT- CS
       TPR_6   4 yklalsyrklgdtdkAlealerlikeYPdS 33 
                 +++a+s+++  +++ A+++l++  k +PdS
  KHJ31760.1 332 LLRAQSQISNEQYESAIRILNDASKYHPDS 361
                 789*****966******************9 PP

  == domain 6  score: 0.5 bits;  conditional E-value: 1
                 HHHHHHHHHHHH CS
       TPR_6  18 kAlealerlike 29 
                 + + a++rl+k 
  KHJ31760.1 397 QIKSAYRRLVKI 408
                 567799999987 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.4   3.8e-07   0.00045       1      33 [.      57      89 ..      57      90 .. 0.95
   2 ?   -1.3   0.1       3.3     4e+03      10      25 ..     123     138 ..     108     145 .. 0.66
   3 ?   -1.1   0.1       2.7   3.2e+03       4      33 ..     319     348 ..     317     349 .. 0.69

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 3.8e-07
      TPR_17  1 lylkaleldPnnadaynnLAelllknGdlmtAr 33
                +y  a+ +dP n   y+ ++ ++l++G++ +A+
  KHJ31760.1 57 YYDAAISRDPQNYLTYFKRGAAYLSLGKSLQAK 89
                699**************************9997 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 3.3
      TPR_17  10 PnnadaynnLAelllk 25 
                 +++  a+ nLA  l++
  KHJ31760.1 123 KKDYLAHGNLASELAQ 138
                 5666666677665554 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 2.7
      TPR_17   4 kaleldPnnadaynnLAelllknGdlmtAr 33 
                 +ale+++ + +   ++A+ + +n +++ A+
  KHJ31760.1 319 EALEYNKFSLYGSLLRAQSQISNEQYESAI 348
                 677777766666667777777888888876 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.3     0.078        93       2      71 ..      48     118 ..      36     121 .. 0.66
   2 ?    5.2   0.1     0.021        25      33      80 ..     152     200 ..     128     202 .. 0.83
   3 ?    2.9   0.0      0.11   1.3e+02      30      63 ..     218     252 ..     210     267 .. 0.88
   4 !   11.6   0.9   0.00021      0.25      10      55 ..     315     361 ..     307     388 .. 0.77
   5 ?   -0.2   0.1      0.98   1.2e+03      20      51 ..     361     396 ..     354     407 .. 0.56

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.078
                 TT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT- CS
      ANAPC3   2 qnnyknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkk 71 
                 ++ +++A+ +++ + +++++++   +  + +++++g+  +A   ++    +++  +g+ +  A+   +L+ 
  KHJ31760.1  48 NGETNDALAYYDAAISRDPQNYLTYFKRGAAYLSLGKSLQAKADFDHVlSIKPGFEGATIQRAKINAQLGD 118
                 45677888888888844444444444448888888888888777766666666666666666666666655 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.021
                 HHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3  33 lylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                   ++ +++++     ka   +sk l+ r + A+c ++ ++++++i+ L+
  KHJ31760.1 152 AEKARNWEQCVVQSTKAiMVASKVLNLRKIRAHCRFENGEIQDGINDLK 200
                 557788999999999999999999********************98765 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.11
                 HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHH CS
      ANAPC3  30 AlclylngqykrAyellrka.klnskslgcrylfA 63 
                 A  +y++ +++r  +  rk+   +++s+ c  l+ 
  KHJ31760.1 218 ATLFYELADFNRGVDQMRKClHFDPESKSCKKLYR 252
                 8889****************999*******99885 PP

  == domain 4  score: 11.6 bits;  conditional E-value: 0.00021
                 HHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC- CS
      ANAPC3  10 flaerllaaetespedayllAlclylngqykrAyellrka.klnsks 55 
                  +++ +l++++ s++ ++l A++  +n+qy++A+++l++a k  + s
  KHJ31760.1 315 SWCDEALEYNKFSLYGSLLRAQSQISNEQYESAIRILNDAsKYHPDS 361
                 589999999999999999*********************95554444 PP

  == domain 5  score: -0.2 bits;  conditional E-value: 0.98
                 H--HHHHHHHHHHHHHTT-...HHHHHHHHHCT.SH CS
      ANAPC3  20 tespedayllAlclylngq...ykrAyellrka.kl 51 
                 ++  +d +  A+  +++++   y++ + l r+a +l
  KHJ31760.1 361 SDEINDKLQEAQLALKRSKtkdYYKVLGLSRDAdDL 396
                 555555555555555555522277777666666444 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   1.7   1.2e-05     0.014       4      49 ..      42      84 ..      39      92 .. 0.91
   2 ?   -0.2   0.3       1.3   1.6e+03      44      63 ..     126     145 ..     109     149 .. 0.82
   3 ?    6.1   0.1     0.015        17       2      30 ..     333     361 ..     332     377 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.2e-05
      TPR_16  4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgr 49
                a+ +l++g+  dA+a+++aa+ rd   P+++  ++ +g a+l +g 
  KHJ31760.1 42 ANKHLANGETNDALAYYDAAISRD---PQNYLTYFKRGAAYLSLGK 84
                667899******************...**************99875 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.3
      TPR_16  44 alrqgrlaeAaalyraalra 63 
                 +l++g+la  +a++++a +a
  KHJ31760.1 126 YLAHGNLASELAQLEEAKGA 145
                 56788888888888888665 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.015
      TPR_16   2 alaraalragdyddAaaaleaalkrdpss 30 
                  +a++ + + +y+ A++ l+ a k++p+s
  KHJ31760.1 333 LRAQSQISNEQYESAIRILNDASKYHPDS 361
                 68999999******************554 PP

>> PknG_TPR  Protein kinase G tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   2.3e-05     0.027      90     160 ..      31     101 ..      20     128 .. 0.87
   2 ?   -0.3   0.0      0.28   3.3e+02     134     171 ..     182     219 ..     136     261 .. 0.75
   3 ?   -2.2   0.0       1.1   1.3e+03     247     318 ..     338     407 ..     331     418 .. 0.55

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.3e-05
                 GCC-SHHHHHHHHHHHHCT-HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHT-HHHHHHHHHHHHHHSTT CS
    PknG_TPR  90 aseslevpLaevrahldlGdveearelLdeleeeveedWrldWyrglaeLlegdyeeAaaeFdevlaalpG 160
                 + + +   L  +  hl  G++++a ++ d+  ++ ++++ + + rg a L+ g+  +A a+Fd+vl++ pG
  KHJ31760.1  31 IDTPISALLLSANKHLANGETNDALAYYDAAISRDPQNYLTYFKRGAAYLSLGKSLQAKADFDHVLSIKPG 101
                 55556677888999*************************99999************************999 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.28
                 HHHHHHHHT-HHHHHHHHHHHHHHSTT-SHHHHHHHHH CS
    PknG_TPR 134 rglaeLlegdyeeAaaeFdevlaalpGEiaPklaLAat 171
                 r+ ++  +g+ +  +++ ++vl++ +G i P + ++at
  KHJ31760.1 182 RAHCRFENGEIQDGINDLKHVLQLKSGMIEPHMQISAT 219
                 45556666666666666666666666666666666666 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 1.1
                 ---HHHHHHHHHHHHTS-TTSCCHHHHHHHHHHHHHHHCTT---SSSEETTEESSHHHHHHHHHHHHHCCCH CS
    PknG_TPR 247 eldeadlreaarrveaLpedeeralqlrvlVlgaALdWlragkassetlLgvpfterglreglEaalRalAr 318
                 ++++++ ++a r ++   + ++ + ++    ++a L+  r++++   ++Lg++ + ++l+  + +a+R l +
  KHJ31760.1 338 QISNEQYESAIRILNDASKYHPDSDEINDKLQEAQLALKRSKTKDYYKVLGLSRDADDLQ--IKSAYRRLVK 407
                 555555555555555555555556666666666666655555555566666666666664..4556666655 PP

>> DUF4619  Domain of unknown function (DUF4619)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.5   0.00014      0.17     125     158 ..     248     281 ..     239     320 .. 0.79
   2 ?    1.8   0.0      0.12   1.4e+02     158     177 ..     363     382 ..     358     400 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00014
     DUF4619 125 rtakkakqelekkmqsltytsgkrqylhKmkmLe 158
                 ++  +  ++lek+++ +++  +krqy++ +kmL 
  KHJ31760.1 248 KKLYRREKSLEKQIKEVKMGLEKRQYVKTLKMLL 281
                 555566669***********************95 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.12
     DUF4619 158 emnrkrqeaqmELkkslhre 177
                 e+n k qeaq  Lk+s  ++
  KHJ31760.1 363 EINDKLQEAQLALKRSKTKD 382
                 7999***********99886 PP

>> SAVED  SMODS-associated and fused to various effectors sensor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2    0.0002      0.24      34     141 ..     329     441 ..     327     446 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0002
       SAVED  34 lGrllgdksgvsvfqyhr......egelWrwdekdddpefe.veveeigkga.evalalslsadidderlkellgdnlpiieitlpnpgndairspedl 124
                  G+ll+ +s +s +qy        + ++++ d+++ ++++   ++  +++++ +   +l+ls+d+dd ++k++     ++++i++p+  ++   s+e++
  KHJ31760.1 329 YGSLLRAQSQISNEQYESairilnDASKYHPDSDEINDKLQeAQLALKRSKTkDYYKVLGLSRDADDLQIKSAYR---RLVKIHHPDKAHRQGISKEEA 424
                 69*************999999999*******88888888886555555555579999***************977...********************* PP

       SAVED 125 ealakavrdalrelkae 141
                 e+ ++av++a + l++ 
  KHJ31760.1 425 ERKMAAVNEAYEVLSDP 441
                 **********9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       984  (0.0548832); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3363.14
//
Query:       KHJ31761.1  [L=242]
Description: putative eukaryotic translation initiation factor 3 subunit k [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.2e-42  142.6   0.0    1.3e-41  142.0   0.0    1.3  1  CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family


Domain annotation for each model (and alignments):
>> CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.0   0.0   7.1e-46   1.3e-41       3     142 ..      66     221 ..      64     223 .. 0.98

  Alignments for each domain:
  == domain 1  score: 142.0 bits;  conditional E-value: 7.1e-46
  CSN8_PSD8_EIF3K   3 kaelytniLlkaLtqndladfrlllkrlpaaiqqs...............deeiqklltLetlLeeanyakfwstlksddlsadltadvaglee 81 
                       +e++tniL+k Lt+++++df+l+l++lp++i++                +e++qkl  L++lL++a+y +fw+tl+sddl+adl+adv+g+ee
       KHJ31761.1  66 RDETITNILVKCLTVFPSSDFSLALHLLPQYILTPlsssksspaagdaplSEAVQKLNILNNLLSQASYSAFWATLDSDDLYADLIADVSGFEE 159
                      689******************************************************************************************* PP

  CSN8_PSD8_EIF3K  82 lvReeiaklvgkaYesIsadvlaelLglssdeelekfvkev.gWeldaatvivpfnpe.eakp 142
                      l+R++ia+ ++++ ++I+ + l+++Lg+   ++++kf++ v gW++ +++vi+p n+e e+k 
       KHJ31761.1 160 LIRIRIASTISQSVREIEVSLLESWLGIH-NDAFKKFITGVcGWQIAGSSVIIPLNKEnEVKV 221
                      *****************************.****************************88775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1843.86
//
Query:       KHJ31762.1  [L=99]
Description: putative lyr family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-08   33.3   0.3    4.9e-08   32.9   0.3    1.2  1  Complex1_LYR  Complex 1 protein (LYR family)


Domain annotation for each model (and alignments):
>> Complex1_LYR  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.3   2.7e-12   4.9e-08       3      58 ..       7      63 ..       5      64 .. 0.85

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 2.7e-12
  Complex1_LYR  3 vLsLYRalLRearkfpdyn.treyfrrriRdeFrknkhvtDpekieellkkgreeLe 58
                  v sLYR+ L+ +  +   +  ++  + +iR  F++nk+++Dp+  + l+++ +e L+
    KHJ31762.1  7 VSSLYRRALKLSLDWAVHRnLWRGQALYIRSLFEANKSIQDPRMQQDLFRETEEILD 63
                  78**********55555554555559**************************99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       380  (0.0211947); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 746.87
//
Query:       KHJ31763.1  [L=901]
Description: putative vacuole-associated enzyme activator complex component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.1e-80  266.9  10.2    1.3e-79  266.0  10.2    1.5  1  Vac14_Fig4_bd  Vacuolar protein 14 C-terminal Fig4p binding
    7.7e-46  154.7   0.0    9.5e-43  144.7   0.0    4.1  4  Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
    6.8e-11   42.4   4.9      0.004   17.6   0.0    5.5  7  HEAT_EZ        HEAT-like repeat
    9.2e-11   41.1   0.2      0.001   19.1   0.0    6.5  6  HEAT           HEAT repeat
    1.1e-06   28.9   1.0       0.11   12.8   0.0    4.8  5  HEAT_2         HEAT repeats
    7.5e-06   26.1   0.6      0.025   14.6   0.3    3.4  3  Cnd1           non-SMC mitotic condensation complex subunit 1
    9.1e-05   22.1   0.0       0.95    9.0   0.1    4.9  6  CLASP_N        CLASP N terminal
  ------ inclusion threshold ------
      0.015   15.3   0.0         13    6.0   0.0    4.7  5  Arm            Armadillo/beta-catenin-like repeat
       0.91    9.8   3.4         32    4.8   0.0    3.5  3  GAIN_A         GPCR-Autoproteolysis-INducing (GAIN) subdomain


Domain annotation for each model (and alignments):
>> Vac14_Fig4_bd  Vacuolar protein 14 C-terminal Fig4p binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  266.0  10.2   6.5e-83   1.3e-79       1     179 []     591     769 ..     591     769 .. 0.99

  Alignments for each domain:
  == domain 1  score: 266.0 bits;  conditional E-value: 6.5e-83
  Vac14_Fig4_bd   1 rkllekrgsliirkLcvllnaekvykelaeiLekeedlefasamvqtLnliLltsselaelRkkLkslkeeeaaelFatLfkswchnpvatlslcL 96 
                    rklle+rg+liir+Lcv+l+ae++y++la ++ekeed+efas+mvq+Ln++L+t++elaelRk+L++l++++++++F++Lf+swc+n+vat+slcL
     KHJ31763.1 591 RKLLETRGNLIIRQLCVSLSAERIYRTLAICIEKEEDVEFASIMVQNLNNNLITAPELAELRKRLRNLESKDGQTFFVALFRSWCYNAVATFSLCL 686
                    68********************************************************************************************** PP

  Vac14_Fig4_bd  97 laqaYelayelvkslaelevtvellvqldkLvqLlEspvfaklRLqLlepekhpallkslygllmlLPqskafktLkkRLksv 179
                    laqaYe+ay+l+ ++aele+tv++l+q+dkLvqLlEspvf++lRLqLlepek p+l+k+lygllmlLPqs+af+ Lk+RL+sv
     KHJ31763.1 687 LAQAYEQAYNLLLVFAELEMTVNMLIQIDKLVQLLESPVFTYLRLQLLEPEKFPHLYKCLYGLLMLLPQSSAFAALKNRLNSV 769
                    ********************************************************************************986 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.7   0.0   4.8e-46   9.5e-43       2      97 .]      60     155 ..      59     155 .. 0.99
   2 ?    0.8   0.0      0.37   7.3e+02      62      95 ..     231     265 ..     226     267 .. 0.78
   3 ?   -1.4   0.0       1.8   3.6e+03      57      96 ..     370     409 ..     364     410 .. 0.87
   4 ?    3.0   0.0     0.077   1.5e+02      24      84 ..     497     556 ..     478     589 .. 0.80

  Alignments for each domain:
  == domain 1  score: 144.7 bits;  conditional E-value: 4.8e-46
  Vac14_Fab1_bd   2 arkggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksgaelldrllkd 97 
                    ar+ggligLaa+aial+ ++ +yl+eiv+pvl+cfsD+d+rvRyyacEs+yniakvakgevl ++n+ifd+l+kl+aDs+ svk+gaelldrl+kd
     KHJ31763.1  60 ARNGGLIGLAAAAIALGPDLPHYLDEIVPPVLACFSDQDARVRYYACESMYNIAKVAKGEVLPYFNDIFDVLCKLCADSELSVKNGAELLDRLIKD 155
                    89*********************************************************************************************8 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.37
  Vac14_Fab1_bd  62 vlkllneifdalvklvaDsdesvksgae.lldrll 95 
                    ++++l e + +l++ ++D +++v+ +++  l+r l
     KHJ31763.1 231 LVSYLPEFLGGLFNFLSDPNSDVRVATQgALERFL 265
                    67788899999999999999999988763566655 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 1.8
  Vac14_Fab1_bd  57 vakgevlkllneifdalvklvaDsdesvksgaelldrllk 96 
                    ++ +evl +  +i+  l   +a   e ++++a+ ++  l 
     KHJ31763.1 370 ICPEEVLPFAPRILAHLLPAMASGVETIRQAAARVNTSLM 409
                    67889999999999999999999999*****999988776 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.077
  Vac14_Fab1_bd  24 yleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesv 84 
                    y   + +  l  ++D+++  R  a   l  + ++a  +v+ +    f al k ++D  e v
     KHJ31763.1 497 YAAAVSSLTLLFLNDHEAT-RVAALTWLLMLHRKAPRKVIAFNDGTFPALLKTLSDPAEAV 556
                    5555555666677777765.999******************9999***********98776 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0     2e-06     0.004       4      51 ..      61     108 ..      58     112 .. 0.86
   2 ?    0.0   0.0      0.66   1.3e+03      15      48 ..     113     146 ..     108     146 .. 0.83
   3 !   12.5   0.0     8e-05      0.16      23      54 ..     232     263 ..     223     264 .. 0.89
   4 !    9.0   0.0     0.001       2.1      16      50 ..     369     403 ..     360     404 .. 0.92
   5 ?   -3.7   0.1         9   1.8e+04      33      48 ..     504     519 ..     498     520 .. 0.63
   6 ?   -1.8   0.0       2.5   4.9e+03      31      44 ..     543     556 ..     542     561 .. 0.80
   7 ?   -3.5   0.0       8.6   1.7e+04      25      45 ..     575     597 ..     570     599 .. 0.72

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 2e-06
     HEAT_EZ   4 RraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAaga 51 
                 R++++ +L+++a   +++l+ +++ei+p+ la+ +d +++VR++A+  
  KHJ31763.1  61 RNGGLIGLAAAAIALGPDLPHYLDEIVPPVLACFSDQDARVRYYACES 108
                 77888888887777899*****************99999*******75 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.66
     HEAT_EZ  15 aggepellqplvpeilpaLlalLnddsdeVRaaA 48 
                 a +++  + p+  +i + L++l  d++ +V+  A
  KHJ31763.1 113 AKVAKGEVLPYFNDIFDVLCKLCADSELSVKNGA 146
                 4666777889999**************9999766 PP

  == domain 3  score: 12.5 bits;  conditional E-value: 8e-05
     HEAT_EZ  23 qplvpeilpaLlalLnddsdeVRaaAagaLgn 54 
                   ++pe l  L ++L+d++++VR a+ gaL++
  KHJ31763.1 232 VSYLPEFLGGLFNFLSDPNSDVRVATQGALER 263
                 4589*************************997 PP

  == domain 4  score: 9.0 bits;  conditional E-value: 0.001
     HEAT_EZ  16 ggepellqplvpeilpaLlalLnddsdeVRaaAag 50 
                   +pe + p+ p+il+ Ll+++ +   ++R+aAa+
  KHJ31763.1 369 DICPEEVLPFAPRILAHLLPAMASGVETIRQAAAR 403
                 579999***************************97 PP

  == domain 5  score: -3.7 bits;  conditional E-value: 9
     HEAT_EZ  33 LlalLnddsdeVRaaA 48 
                 L  l  +d+ ++R aA
  KHJ31763.1 504 LTLLFLNDHEATRVAA 519
                 4444456888888888 PP

  == domain 6  score: -1.8 bits;  conditional E-value: 2.5
     HEAT_EZ  31 paLlalLnddsdeV 44 
                 paLl++L+d+  +V
  KHJ31763.1 543 PALLKTLSDPAEAV 556
                 89*****9987777 PP

  == domain 7  score: -3.5 bits;  conditional E-value: 8.6
     HEAT_EZ  25 lvpeilpaLlalLnddsd..eVR 45 
                 + ++ +  Ll+l ++d +  e+R
  KHJ31763.1 575 YFSQFMQNLLQLFSTDRKllETR 597
                 56788999999998888744445 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       1.1   2.2e+03       3      18 ..       3      18 ..       3      21 .. 0.86
   2 !   19.1   0.0   5.1e-07     0.001       1      30 [.      86     115 ..      86     116 .. 0.96
   3 ?    0.2   0.0      0.63   1.3e+03       1      16 [.     127     142 ..     127     146 .. 0.85
   4 !    7.6   0.0    0.0027       5.4       4      27 ..     241     264 ..     238     266 .. 0.83
   5 ?    0.9   0.0      0.37   7.3e+02       1      22 [.     382     403 ..     382     404 .. 0.88
   6 ?    2.5   0.0      0.11   2.3e+02       3      16 ..     543     556 ..     542     570 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1.1
                HHHHHHHT-SSHHHHH CS
        HEAT  3 PlllkllsDpspeVRe 18
                P ++++l+D+  e R+
  KHJ31763.1  3 PGIQRALNDKIYEKRK 18
                6799******999987 PP

  == domain 2  score: 19.1 bits;  conditional E-value: 5.1e-07
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 ++P++l + sD++++VR+ A++++ ++a+v
  KHJ31763.1  86 IVPPVLACFSDQDARVRYYACESMYNIAKV 115
                 79**************************97 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.63
                 HHHHHHHHHT-SSHHH CS
        HEAT   1 llPlllkllsDpspeV 16 
                 ++++l+kl+ D++ +V
  KHJ31763.1 127 IFDVLCKLCADSELSV 142
                 6789*******99887 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.0027
                 HHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgal 27 
                  l + lsDp+++VR a+  aL ++
  KHJ31763.1 241 GLFNFLSDPNSDVRVATQGALERF 264
                 578889**********99888766 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.37
                 HHHHHHHHHT-SSHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAak 22 
                 +l +ll ++ +    +R+aAa+
  KHJ31763.1 382 ILAHLLPAMASGVETIRQAAAR 403
                 6778999999999*******96 PP

  == domain 6  score: 2.5 bits;  conditional E-value: 0.11
                 HHHHHHHT-SSHHH CS
        HEAT   3 PlllkllsDpspeV 16 
                 P+llk lsDp+  V
  KHJ31763.1 543 PALLKTLSDPAEAV 556
                 99********9988 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   5.7e-05      0.11      18      83 ..      69     146 ..      68     149 .. 0.73
   2 ?    5.6   0.0      0.01        21      33      71 ..     239     278 ..     227     300 .. 0.66
   3 ?    0.0   0.0      0.56   1.1e+03      61      84 ..     380     402 ..     360     406 .. 0.65
   4 ?    4.0   0.1     0.033        66      13      74 ..     512     590 ..     498     600 .. 0.68
   5 ?   -2.9   0.0       4.8   9.6e+03       1      20 [.     714     733 ..     714     735 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 5.7e-05
      HEAT_2  18 raairaLg.rign..pealpaLvellededpavRraaaeaLgaig.....d.....pealpaLkellddddddvvReaA 83 
                 +aa++aLg ++ +  +e++p ++ + +d+d++vR+ a+e++  i+     +     ++  ++L++l++ d++  v++ A
  KHJ31763.1  69 AAAAIALGpDLPHylDEIVPPVLACFSDQDARVRYYACESMYNIAkvakgEvlpyfNDIFDVLCKLCA-DSELSVKNGA 146
                 58999999866653359************************877422233234456778888888886.4565566655 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.01
      HEAT_2  33 lpaLvellededpavRraaaeaLgai.gdpealpaLkell 71 
                 l  L+++l+d++++vR a   aL ++ g+ + l+  k+  
  KHJ31763.1 239 LGGLFNFLSDPNSDVRVATQGALERFlGEIKRLSRIKKGI 278
                 5568999999999999999988865435555555555544 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.56
      HEAT_2  61 pealpaLkellddddddvvReaAa 84 
                 p+ l++L+ ++++  + + R+aAa
  KHJ31763.1 380 PRILAHLLPAMASGVETI-RQAAA 402
                 444555555555543333.44443 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.033
      HEAT_2  13 dpevrraairaLg...rignp.......ealpaLvellededpavRraaaeaLgai....gd...pealpaLkellddd 74 
                 ++++r aa+  L    r++++        ++paL++ l+d+ +av     + L++i    gd   +++ + L++l+ +d
  KHJ31763.1 512 HEATRVAALTWLLmlhRKAPRkviafndGTFPALLKTLSDPAEAVVTRDLQLLSQIsknsGDeyfSQFMQNLLQLFSTD 590
                 4566677776666343333334444444669*************99999999998844443445555777777777666 PP

  == domain 5  score: -2.9 bits;  conditional E-value: 4.8
      HEAT_2   1 ldaLlqalendpdpevrraa 20 
                 +d+L+q+le+  ++++r + 
  KHJ31763.1 714 IDKLVQLLESPVFTYLRLQL 733
                 57788888888888887765 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0025       4.9      15      74 ..      79     142 ..      68     184 .. 0.66
   2 ?   -0.8   0.0       0.7   1.4e+03      59      84 ..     238     263 ..     231     286 .. 0.75
   3 !   14.6   0.3   1.3e-05     0.025      38     132 ..     516     627 ..     497     645 .. 0.69

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0025
        Cnd1  15 vpnlveylvepLrkrLkDedpyVRktaaivvakL...ilndmvkekg.flselaklleDenprV 74 
                 +p+ ++++v+p+ ++++D+d+ VR  a   + ++    + ++    + +++ l kl  D++ +V
  KHJ31763.1  79 LPHYLDEIVPPVLACFSDQDARVRYYACESMYNIakvAKGEVLPYFNdIFDVLCKLCADSELSV 142
                 5778888888888888998888888775433333221444433333335555555555555555 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.7
        Cnd1  59 flselaklleDenprVvanalaalte 84 
                 fl  l + l+D+n+ V+  ++ al+ 
  KHJ31763.1 238 FLGGLFNFLSDPNSDVRVATQGALER 263
                 56667777888888888777766665 PP

  == domain 3  score: 14.6 bits;  conditional E-value: 1.3e-05
        Cnd1  38 RktaaivvakL...ilndmvk.ekgflselaklleDenprVvanalaalteiseksenaiyn.llpdiisklsdalne.............csewgqit 118
                 R  a+  ++ L     ++++  + g +  l+k l+D+ + Vv+  l +l++is++s+++ ++  ++++++ +s+   +             c   +   
  KHJ31763.1 516 RVAALTWLLMLhrkAPRKVIAfNDGTFPALLKTLSDPAEAVVTRDLQLLSQISKNSGDEYFSqFMQNLLQLFST-DRKlletrgnliirqlCVSLSAER 613
                 555666666663322223333145599****************************6666555055555666555.233344667777777788888888 PP

        Cnd1 119 ilefLlsyipkdkq 132
                 i+++L+ +i+k++ 
  KHJ31763.1 614 IYRTLAICIEKEED 627
                 88888888888876 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.22   4.5e+02      85     202 ..      76     111 ..      61     122 .. 0.57
   2 ?    2.5   0.0     0.047        94      73     124 ..     105     155 ..      85     168 .. 0.80
   3 ?    1.8   0.0     0.076   1.5e+02     143     200 ..     209     261 ..     208     287 .. 0.78
   4 ?   -0.6   0.0       0.4     8e+02      83     122 ..     370     409 ..     358     416 .. 0.84
   5 ?    0.5   0.0      0.18   3.6e+02     145     192 ..     514     556 ..     501     560 .. 0.77
   6 !    9.0   0.1   0.00048      0.95      74     136 ..     561     619 ..     527     638 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.22
     CLASP_N  85 keqldpmveillptLlkllgdtKkiisqnanqalaallsnasfsprilqvlsvalqdKnvqpReysaiwLkilltrfeshkskleasllldliekslkk 183
                 +++l ++++ ++p  l                                                                                   
  KHJ31763.1  76 GPDLPHYLDEIVPPVLA---------------------------------------------------------------------------------- 92 
                 55555555555555555.................................................................................. PP

     CLASP_N 184 gleDanptVRetaRstfwe 202
                 + +D +  VR  a + + +
  KHJ31763.1  93 CFSDQDARVRYYACESMYN 111
                 5555555555544444443 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.047
     CLASP_N  73 gchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsn 124
                 +c+ + ++a++ k ++ p+ + ++++L kl++d  +++ +n++  l+ l+++
  KHJ31763.1 105 ACESMYNIAKVAKGEVLPYFNDIFDVLCKLCADS-ELSVKNGAELLDRLIKD 155
                 677888899999999999*************997.45556666667766665 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.076
     CLASP_N 143 nvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanptVRetaRstf 200
                 n+++R++ ++w++ ll++ +     le  + l ++   l  +l+D+n+ VR ++  ++
  KHJ31763.1 209 NPFTRTFLVGWIT-LLDSIP----DLELVSYLPEFLGGLFNFLSDPNSDVRVATQGAL 261
                 6677777777764.455555....56666767777778999**********8876655 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 0.4
     CLASP_N  83 qlkeqldpmveillptLlkllgdtKkiisqnanqalaall 122
                 ++ e++ p++ ++l +Ll  +++  + i+q+a+ + ++l+
  KHJ31763.1 370 ICPEEVLPFAPRILAHLLPAMASGVETIRQAAARVNTSLM 409
                 67788899999********************998766665 PP

  == domain 5  score: 0.5 bits;  conditional E-value: 0.18
     CLASP_N 145 qpReysaiwLkilltrfeshkskleasllldliekslkkgleDanptV 192
                  +R  +++wL +l+++ + +k  + + +      ++l k l+D+  +V
  KHJ31763.1 514 ATRVAALTWLLMLHRKAP-RKVIAFNDG----TFPALLKTLSDPAEAV 556
                 579999********9999.333333333....3599999999998877 PP

  == domain 6  score: 9.0 bits;  conditional E-value: 0.00048
     CLASP_N  74 chllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnasfsprilqvls 136
                 ++l   l+++ k++ d++  +++++Ll+l +   k+  + +n ++ +l+ ++s  +ri + l 
  KHJ31763.1 561 LQL---LSQISKNSGDEYFSQFMQNLLQLFSTDRKLLETRGNLIIRQLCVSLS-AERIYRTLA 619
                 444...55556666789999*****************************9999.777755544 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0    0.0064        13      13      40 ..      86     113 ..      84     114 .. 0.94
   2 ?   -3.0   0.0       4.5     9e+03      20      36 ..     245     261 ..     244     262 .. 0.85
   3 ?   -1.0   0.0         1   2.1e+03      14      34 ..     383     403 ..     380     404 .. 0.81
   4 ?    0.5   0.0      0.36   7.1e+02      10      29 ..     538     557 ..     529     559 .. 0.80
   5 ?    1.2   0.0      0.21   4.3e+02      14      29 ..     714     729 ..     712     730 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0064
                 HHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm  13 avppLvrLLssedeevqeeAawALsNLa 40 
                 +vpp +++ s++d +v+  A+  + N+a
  KHJ31763.1  86 IVPPVLACFSDQDARVRYYACESMYNIA 113
                 79********************999998 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 4.5
                 HTTTSSHHHHHHHHHHH CS
         Arm  20 LLssedeevqeeAawAL 36 
                 +Ls+++ +v+ +  +AL
  KHJ31763.1 245 FLSDPNSDVRVATQGAL 261
                 79999999999988887 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 1
                 HHHHHHHTTTSSHHHHHHHHH CS
         Arm  14 vppLvrLLssedeevqeeAaw 34 
                 + +L+  + s+ e+++++Aa+
  KHJ31763.1 383 LAHLLPAMASGVETIRQAAAR 403
                 667888888999****99996 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.36
                 HTTHHHHHHHHTTTSSHHHH CS
         Arm  10 eaGavppLvrLLssedeevq 29 
                 + G  p+L++ Ls++ e v+
  KHJ31763.1 538 NDGTFPALLKTLSDPAEAVV 557
                 78999********9999886 PP

  == domain 5  score: 1.2 bits;  conditional E-value: 0.21
                 HHHHHHHTTTSSHHHH CS
         Arm  14 vppLvrLLssedeevq 29 
                 ++ Lv+LL+s+  +++
  KHJ31763.1 714 IDKLVQLLESPVFTYL 729
                 789*******987766 PP

>> GAIN_A  GPCR-Autoproteolysis-INducing (GAIN) subdomain A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.2       1.2   2.4e+03      12      42 ..     269     298 ..     266     299 .. 0.71
   2 ?    4.8   0.0     0.016        32       9      19 ..     559     569 ..     557     575 .. 0.87
   3 ?    3.2   0.1     0.051     1e+02      31      43 ..     649     661 ..     645     662 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.2
      GAIN_A  12 qlLSqLLkhPqkasRrpsatpasqqLqsLES 42 
                 ++LS++ k+  +asR++ +   ++   sL S
  KHJ31763.1 269 KRLSRI-KKGIQASRKSRSDTKRRLVESLGS 298
                 677775.667789999988866666677755 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.016
      GAIN_A   9 rdLqlLSqLLk 19 
                 rdLqlLSq+ k
  KHJ31763.1 559 RDLQLLSQISK 569
                 9*******966 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.051
      GAIN_A  31 tpasqqLqsLESK 43 
                 +  +++L++LESK
  KHJ31763.1 649 AELRKRLRNLESK 661
                 56799*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (901 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       556  (0.0310112); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.71u 0.27s 00:00:00.98 Elapsed: 00:00:00.46
# Mc/sec: 5946.27
//
Query:       KHJ31764.1  [L=458]
Description: putative ldb17 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.9e-50  168.5   5.7    8.9e-50  168.5   5.7    2.5  2  DUF2013          Protein of unknown function (DUF2013)
     0.0077   15.8   0.3      0.079   12.5   0.1    2.6  2  NopRA1           Nucleolar pre-ribosomal-associated protein 1
  ------ inclusion threshold ------
      0.024   15.1   0.1       0.47   11.0   0.0    2.4  2  Phage_int_SAM_4  Phage integrase, N-terminal SAM-like domain


Domain annotation for each model (and alignments):
>> DUF2013  Protein of unknown function (DUF2013)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   2.5     0.099   5.9e+02      44     104 ..     117     175 ..      37     181 .. 0.73
   2 !  168.5   5.7   1.5e-53   8.9e-50       2     138 .]     184     324 ..     183     324 .. 0.95

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.099
     DUF2013  44 sktfgenlilllNReedlvlqllilklLyllfttsetaelfYtnDlkVLvDviiRelsdls 104
                  k +   l+ l+N  +++     +l lL  l+ + + ++ + t Dl+ + D ++ +l ++ 
  KHJ31764.1 117 HKGCFPRLVKLINSDQKKDK--ALLSLLLNLLYEMSWCQQLSTDDLRQVSDEFVMNLLNMI 175
                 44555566666665544333..556677777777788888889999988888888888874 PP

  == domain 2  score: 168.5 bits;  conditional E-value: 1.5e-53
     DUF2013   2 delnysviklllalneqfmvasles....kelenkvlkvlsekksssktfgenlilllNReedlvlqllilklLyllfttsetaelfYtnDlkVLvDvi 96 
                 d+++y vi++ll+lneq+m+as+ +    + l+n v+k+ls++ ss++tfgenlilllNRe++++lqllilkl+yllft+++t+e+fYtnDl+VL+Dvi
  KHJ31764.1 184 DPYHYFVIRVLLVLNEQYMIASTMPhkdsRFLTNPVVKLLSSNGSSFMTFGENLILLLNRETESSLQLLILKLFYLLFTNQATYEYFYTNDLRVLLDVI 282
                 899******************98777777789******************************************************************* PP

     DUF2013  97 iRelsdlsdeeeeklrhtyLrvlhpllkntqlsee.kykreel 138
                 iR+l dl ++e+++lrhtyLrvl+pll +tql++   yk++++
  KHJ31764.1 283 IRNLLDL-PTESNSLRHTYLRVLYPLLAHTQLNQPpYYKKDQI 324
                 *******.8**************************77788775 PP

>> NopRA1  Nucleolar pre-ribosomal-associated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.1   1.3e-05     0.079     135     183 ..     101     150 ..      97     162 .. 0.75
   2 ?   -0.3   0.0      0.12   6.9e+02      11      51 ..     292     333 ..     279     359 .. 0.57

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.3e-05
      NopRA1 135 lladGlrtksDlkllkrrrvfelllslynspll.daklrelilelllrat 183
                 ll+dG r+++ ++++k++++f +l+ l+ns    d++l +l+l+ll+++ 
  KHJ31764.1 101 LLQDGRRNDATFNVMKHKGCFPRLVKLINSDQKkDKALLSLLLNLLYEMS 150
                 699**************************933324445555555555554 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.12
      NopRA1  11 edeeirrlAlavlskllasleesss.fkektqlllllselle 51 
                 e++++r+  l vl  lla+ + ++  +  k+q++ +l++l  
  KHJ31764.1 292 ESNSLRHTYLRVLYPLLAHTQLNQPpYYKKDQIMNVLNSLIA 333
                 455555555555555555555544455555555555555544 PP

>> Phage_int_SAM_4  Phage integrase, N-terminal SAM-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.082   4.9e+02      56      78 ..      24      46 ..      18      52 .. 0.81
   2 ?   11.0   0.0   7.8e-05      0.47      15      65 ..     293     343 ..     278     352 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.082
  Phage_int_SAM_4 56 erklsastqknalnalsffykkv 78
                      +  s+++++n l+ + +f++k+
       KHJ31764.1 24 AKDSSPRSINNVLRTFIYFVQKL 46
                     56679**************9985 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 7.8e-05
  Phage_int_SAM_4  15 serTiksYlsaikrflrflkkkapeeltkedieaYlnyLanerklsastqk 65 
                      s++ +++Yl+ ++++l++++  +p   +k++i+  ln+L+ +r++++  ++
       KHJ31764.1 293 SNSLRHTYLRVLYPLLAHTQLNQPPYYKKDQIMNVLNSLIAKRNAHWEPVD 343
                      556689**************999999******************9998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3455.54
//
Query:       KHJ31765.1  [L=135]
Description: putative histone h2b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.3e-22   78.4   1.3    7.8e-22   78.0   1.3    1.1  1  Histone        Core histone H2A/H2B/H3/H4
      5e-05   23.5   1.0    9.9e-05   22.5   0.0    1.9  2  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
    0.00024   21.5   0.0    0.00042   20.8   0.0    1.3  1  TFIID_20kDa    Transcription initiation factor TFIID subunit 
  ------ inclusion threshold ------
      0.027   14.1   0.1      0.059   13.0   0.1    1.5  1  RP-C           Replication protein C N-terminal domain
      0.061   14.3   0.4        0.1   13.6   0.4    1.5  1  DUF1018        Protein of unknown function (DUF1018)


Domain annotation for each model (and alignments):
>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.0   1.3   2.2e-25   7.8e-22      24     130 ..       7     109 ..       1     110 [. 0.90

  Alignments for each domain:
  == domain 1  score: 78.0 bits;  conditional E-value: 2.2e-25
                 XXHTTS-SSSSB--TTT-XTTHHHHHHHHHHHHXXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHH CS
     Histone  24 kkerkasskskkkkkrryrpgtvalkeirkyqkstdlliqklpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpk 122
                 +k+++as+ ++k+   +++ ++ a + ++k++ +t++++++ ++++v++++++    d +is++a+ +l+++++++++++++eA++la ++K++Ti ++
  KHJ31765.1   7 EKKPSASKAPAKAPVAKEAGKKTASTGEKKKRTKTRKETYSSYIYKVLKQVHP----DTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSR 101
                 33336667777777788899999******************************....****************************************** PP

                 HHHHHHHH CS
     Histone 123 DiqlArrl 130
                 +iq+ +rl
  KHJ31765.1 102 EIQTSVRL 109
                 ****9997 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.2      0.85   3.1e+03      48      55 ..      22      29 ..      15      39 .. 0.62
   2 !   22.5   0.0   2.8e-08   9.9e-05       8      64 ..      50     106 ..      48     107 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.85
                   HCCTTSSC CS
  CBFD_NFYB_HMF 48 ckkekrKt 55
                   +k++++Kt
     KHJ31765.1 22 AKEAGKKT 29
                   44444444 PP

  == domain 2  score: 22.5 bits;  conditional E-value: 2.8e-08
                    HHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF   8 vkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklA 64 
                    + k++k+  pd++ i++ A  +++ +v    e++a+eA++++  +k+ ti+   i+  
     KHJ31765.1  50 IYKVLKQVhPDTG-ISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTS 106
                    779*****88888.*************************************9999876 PP

>> TFIID_20kDa  Transcription initiation factor TFIID subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   1.2e-07   0.00042       7      60 ..      52     105 ..      48     110 .. 0.94

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 1.2e-07
                  HHHHCC-SS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEE-HHHHHH CS
  TFIID_20kDa   7 dLvqqvdsetkldedvedlLleiaddFvesvtkfacklakhRksdklevrDiql 60 
                    ++qv ++t + +    +L   ++d  e v + a+kla + k +++++r iq 
   KHJ31765.1  52 KVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQT 105
                  6799************************************************95 PP

>> RP-C  Replication protein C N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   1.7e-05     0.059      19      83 ..      40     105 ..      21     111 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.7e-05
        RP-C  19 akkkgvdkwqllralkeakaalgvsdralavLdaLlsftpeddlseearlivfpsNaqLs.ralgl 83 
                 +++k++  + +++ lk+  +  g+s+ra+++L+ +++   e+  +e ++l  +    ++s r+++ 
  KHJ31765.1  40 KTRKETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISsREIQT 105
                 12233778899**************************99999999999999999988888777765 PP

>> DUF1018  Protein of unknown function (DUF1018)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.4   2.8e-05       0.1      35      94 ..      23      80 ..       3     100 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.8e-05
     DUF1018 35 kalgfkpkskkkakrkkparkatsaqlrkiealWielakagvvrdrseaaLnafvkrqtg 94
                k++g+k +s+  +k++++  + ++++  +i+++ ++++ +  + +r+ + Ln+fv+ ++ 
  KHJ31765.1 23 KEAGKKTASTGEKKKRTK--TRKETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFE 80
                445556666655554443..899********************************99883 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1128  (0.0629148); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1105.90
//
Query:       KHJ31766.1  [L=563]
Description: putative fatty acid desaturase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-27   97.2  23.2    1.9e-27   96.7  23.2    1.2  1  FA_desaturase  Fatty acid desaturase
    1.2e-10   41.3   0.0    2.4e-10   40.4   0.0    1.5  1  Cyt-b5         Cytochrome b5-like Heme/Steroid binding domain
  ------ inclusion threshold ------
        5.2    6.1   9.1        4.5    6.3   2.4    2.1  2  UT             Urea transporter


Domain annotation for each model (and alignments):
>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.7  23.2   3.2e-31   1.9e-27       4     252 ..     252     527 ..     250     529 .. 0.68

  Alignments for each domain:
  == domain 1  score: 96.7 bits;  conditional E-value: 3.2e-31
  FA_desaturase   4 lalllalllglfllgitgslaHeaaHgalfkkrklnrwlndllgal.lglplgisysawrisHlrHHaytngpdeDpdlaplal............ 86 
                    + +l +++lg +++++ ++ +H+a+H  ++++       ++l+g + + ++ g s  +w++ H++HH  tn+p++Dpd+ +l+             
     KHJ31766.1 252 WYALSGVFLGCLWHQL-VFTVHDAGHMGITHNFTY----DTLIGIFiADFIGGLSLGWWKRNHNVHHVVTNSPEHDPDIEHLPFfaishrffdslk 342
                    4556679****95444.59*******988833333....55556666*********************************9999999997777555 PP

  FA_desaturase  87 .......srfeglfry.........llrlllgllvlg..wllalvlgl.wlrrlarrrapsksrrrkwrllawlllllaw..lglwlalllllgla 161
                                   y         + ++l+ + ++   ++l++++   ++r+l+ r+ p++  r  w  ++  +++++w  +g+++ ++l  +  
     KHJ31766.1 343 ssfyervM------SYdafarlvvpYQAYLYYPILTFgrFNLYFLSWDyLIRGLGPRKGPAWWHR--WLEITGQIFFWYWfgYGILYKTIL--ST- 427
                    53333331......224433334443333333333332333333332234444444444444333..888899999987733333333333..33. PP

  FA_desaturase 162 ll....lwlvplllllfllalvlnyveHyg.........gdwgerqvetsasirsaswllnlltgnlnyHieHHlfPgvpwyrLpelhrrlrellp 244
                     +    ++l+ +++ ++l++     ++H++         +++++  ++t+ +++ ++ +l++++g+l+++++HHlfP++p ++L++ ++ ++e+++
     KHJ31766.1 428 -SgrlsFVLASHMVTMILHVQ--ITLSHFAmstaelgpnESFPQKMLRTTMDVD-CPQWLDFFHGGLQFQVIHHLFPRMPRHNLRRTQKLVQEYCQ 519
                    .23464666666666555544..6899999999999765556666666666666.***************************************** PP

  FA_desaturase 245 ehglpyrs 252
                    e g+py  
     KHJ31766.1 520 EVGIPYAI 527
                    *****975 PP

>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   0.0   4.1e-14   2.4e-10      12      73 ..      31      90 ..      20      91 .. 0.87

  Alignments for each domain:
  == domain 1  score: 40.4 bits;  conditional E-value: 4.1e-14
                TEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHHHHHHHGGEEEEE CS
      Cyt-b5 12 ndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekdaekllkkylvGkl 73
                ++  + +++ V  v+ +l++hpGge+ il+  G+Dat+++ +  hs++ a++ + ky++G++
  KHJ31766.1 31 GKKIILVNNYVLKVDAWLKYHPGGEKTILHMIGRDATDEVSVL-HSSE-AREQMMKYRIGRI 90
                5566889************************************.9999.5666689****97 PP

>> UT  Urea transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   2.4   0.00076       4.5     181     224 ..     237     280 ..     233     302 .. 0.87
   2 ?    3.2   1.4    0.0068        41      96     200 ..     339     438 ..     287     461 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.00076
                 HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTT--HHHHHCTCC CS
          UT 181 llillallissriaallallGsllgllaalllgapleaiysGlw 224
                 +++l al+i+    +++al G++lg+l + l+   ++a ++G+ 
  KHJ31766.1 237 YVFLFALMIICLQKCWYALSGVFLGCLWHQLVFTVHDAGHMGIT 280
                 69***************************999998998888874 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.0068
                 HHHHHHHHHHHHHTTT---TTHHHHHHHHHHHHGGGCSTTSBB-TT---------------HHHHHHHHHHHHHHCCT---HHHHHHHHHHHHHH-HHH CS
          UT  96 stlvtaalssvlkkwklpvlTlPFvlvtwllllatgklnklepstllapalleaesssslslpellrgllvgvgqVffldnvlaGllillallissria 194
                   l +++ ++v++ + ++ l +P+       +l +g +n ++ s +              + p +++ +l   gq+ff   +  G+l    l  s r++
  KHJ31766.1 339 DSLKSSFYERVMSYDAFARLVVPYQAYLYYPILTFGRFNLYFLSWDYL-----IRGLGPRKGPAWWHRWLEITGQIFFWYWFGYGILYKTILSTSGRLS 432
                 555666777777888888888888888888888888888887776543.....45667788999***************99999999999999999999 PP

                 HHHHHH CS
          UT 195 allall 200
                 ++la  
  KHJ31766.1 433 FVLASH 438
                 998854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       467  (0.0260472); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4285.39
//
Query:       KHJ31767.1  [L=764]
Description: putative threonyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.5e-33  114.2   0.0    1.3e-31  109.9   0.0    2.3  2  tRNA-synt_2b    tRNA synthetase class II core domain (G, H, P
    8.2e-17   61.1   0.1    1.9e-16   59.9   0.1    1.6  1  HGTP_anticodon  Anticodon binding domain
      7e-13   48.4   0.0    1.6e-12   47.3   0.0    1.6  1  tRNA_SAD        Threonyl and Alanyl tRNA synthetase second ad
    4.8e-10   39.3   0.0    1.1e-09   38.2   0.0    1.6  1  TGS             TGS domain


Domain annotation for each model (and alignments):
>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.9   0.0   2.9e-35   1.3e-31       1     153 [.     398     581 ..     398     592 .. 0.91
   2 ?    1.6   0.0     0.051   2.3e+02     158     178 ..     625     647 ..     615     648 .. 0.86

  Alignments for each domain:
  == domain 1  score: 109.9 bits;  conditional E-value: 2.9e-35
                   EEEEETTSEEEEE-SSSHHHHHHHHHHHEEEBGG.SSEEEEEEEEEEBTTTS.TBCTTTB-SEEEEEEEEEEESGGGHHHHHHHHHHHHHHHHHHTT CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b   1 YkledrndreyiLkPtneetfvelirdevlrskr.LPlklyqiqtkyRdEks.dsrGLlRvreFhqkdgyvfhaeaslddslrdlikaisriferlg 95 
                   +++ d+ ++ ++LkP+n+++++ ++  +  rs+r LP ++++++ ++R+E+s +++GL+Rvr F+q+d+++f+ e++++d++ dl+   + ++  lg
    KHJ31767.1 398 FTFGDE-KETLALKPMNCPGHCLMFAHR-ERSYReLPWRVADFGVLHRNEASgALSGLTRVRRFQQDDAHIFCREDQIKDEITDLFDFLNAVYGLLG 492
                   566676.59*****************88.9**888*****************99******************************************* PP

                   .SCEEEEEEGTTSC..................................BTTSEEEEEEEEETTTSEEEEEEEEEEEETHHHHHTTEEEECTT CS
                   xxxxxxxxxxxxxx..................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b  96 lefraiielmsaks..................................adykdkkefeavsesltkgieigtiqklgtrlserlgatvlden 153
                   + f +++++++ ++                                  a+y++k ++++ ++ l+++++++tiq + ++l++ +g++++  +
    KHJ31767.1 493 FTF-KMKLSTRPEKymgkleiwnlaeaklcsaldefapgawelnegdgAFYGPKIDITISDC-LRRQWQCATIQLD-FQLPQNFGLEYMSTE 581
                   985.5666666555666777***************************************999.*************.*********997665 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.051
                   EEEEEEEE.EE.HHHHHHHHHHH CS
                   xxxxxxxx.xx.xxxxxxxxxxx RF
  tRNA-synt_2b 158 svimicaa.ig.veRllsaileq 178
                   ++++i++a  g +eR+ ++++e+
    KHJ31767.1 625 RPVIIHRAiAGsIERFTGILTEH 647
                   789*****5559*******9997 PP

>> HGTP_anticodon  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.9   0.1   4.3e-20   1.9e-16       1      89 [.     660     749 ..     660     753 .. 0.89

  Alignments for each domain:
  == domain 1  score: 59.9 bits;  conditional E-value: 4.3e-20
                     SEEEEESSSSHHHHHHHHHHHHHHHHTTTSEEEEESSSSTHHHHHHHHHHTT-SEEEEE-HHHHHHTEEEEEETTTC.EE...EEEETTHHHH CS
  HGTP_anticodon   1 qvvviplnekaeeleeyakklaeeLraagirvelddsnesigkkireadllgipfavvvGekelekgtvtvrdrdtr.eq...ervsldelve 89 
                     q++vip++     + +ya+++++ +r++ + v++d s+++++kkir  +l++++f++vvG++e++ ++v+vr+rd++ +q     v+l+e+++
      KHJ31767.1 660 QILVIPVGV---GFYDYAREVQAIFRDQQMFVDVDLSGNTLQKKIRTGQLAQYNFIFVVGDQEMKGREVNVRNRDDTsSQdrgKPVPLQEIMS 749
                     789******...9***************************************************88********7663555445777777766 PP

>> tRNA_SAD  Threonyl and Alanyl tRNA synthetase second additional domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.3   0.0   3.5e-16   1.6e-12       2      44 .]     251     299 ..     250     299 .. 0.98

  Alignments for each domain:
  == domain 1  score: 47.3 bits;  conditional E-value: 3.5e-16
                 EEEEETT.EEEEESS---SBGGGC-SEEEE.......CCECCCTCEEEEE CS
    tRNA_SAD   2 rvvsiGdisvelCgGtHvpnTgeIgafkil.......seesiakglrRIy 44 
                 +v++ G   ++lC+G+Hvp+Tg I+ f+i+        ++++++ l+RIy
  KHJ31767.1 251 TVYRNGP-LIDLCRGPHVPHTGRIETFAIMknsasyfLGDKNNDSLQRIY 299
                 79****7.*****************************************9 PP

>> TGS  TGS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.2   0.0   2.4e-13   1.1e-09       1      57 [.      79     139 ..      79     142 .. 0.93

  Alignments for each domain:
  == domain 1  score: 38.2 bits;  conditional E-value: 2.4e-13
                 EEEEETTSSEEEEETTB-.HHHHHHHHSTTHHHHEEEEEECS...EEEETTSBB-SSEEEE CS
         TGS   1 irvytPdGkvpdlprgat.veDfAykIhrslakkfiyAlVnG...qrvgldhvLedgdvve 57 
                 i++ +PdG++++  +++t + D+A+ I+ sl k++++A+ n    q+++ld++Le  +++ 
  KHJ31767.1  79 ITIILPDGSEKQGLSWKTtPADIAKGISNSLFKRTVVARLNCddnQLWDLDRPLETSCKLD 139
                 6899********8888888**********************99*************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (764 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       610  (0.0340231); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 5194.09
//
Query:       KHJ31768.1  [L=134]
Description: putative histone h2a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.6e-21   74.3   2.8    7.8e-21   73.5   2.8    1.4  1  Histone_H2A_C  C-terminus of histone H2A
    1.9e-16   60.6   0.0    2.7e-16   60.1   0.0    1.2  1  Histone        Core histone H2A/H2B/H3/H4
      1e-05   25.7   0.0    1.4e-05   25.3   0.0    1.2  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a


Domain annotation for each model (and alignments):
>> Histone_H2A_C  C-terminus of histone H2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.5   2.8   1.3e-24   7.8e-21       1      34 [.      95     128 ..      95     129 .. 0.97

  Alignments for each domain:
  == domain 1  score: 73.5 bits;  conditional E-value: 1.3e-24
  Histone_H2A_C   1 EELnkLLggVTIAqGGVLPnIhkvLLpkktkkkk 34 
                    EELnkLLg+VTIAqGGVLPnIh++LLpkktk  k
     KHJ31768.1  95 EELNKLLGHVTIAQGGVLPNIHQNLLPKKTKPPK 128
                    9******************************987 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.1   0.0   4.5e-20   2.7e-16      52     129 ..      16      92 ..      11      94 .. 0.95

  Alignments for each domain:
  == domain 1  score: 60.1 bits;  conditional E-value: 4.5e-20
                 HHHHHXXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHHH CS
     Histone  52 rkyqkstdlliqklpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlArr 129
                 ++ q ++ + + ++p+ Rv+r ++k     +r+ a a+++l+++lE+l +e++e+A+++a+++K+ +i p+++qlA+r
  KHJ31768.1  16 KNAQTRSSKAGLAFPVGRVHRLLRK-GNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIR 92 
                 6779999999**************9.9999***********************************************9 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   2.3e-09   1.4e-05       3      65 .]      29      91 ..      27      91 .. 0.97

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 2.3e-09
                   XXHHHHHHHHHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF  3 LPiarvkkImksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65
                   +P+ rv +++++ + a+++   A++++a ++e  + e+++ A   + ++k+  i + h++lA+
     KHJ31768.1 29 FPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAI 91
                   9***********************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       264  (0.0147247); expected 358.6 (0.02)
Passed bias filter:                      222  (0.0123822); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 1035.05
//
Query:       KHJ31769.1  [L=747]
Description: putative ph domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-07   29.8   1.2    1.2e-06   28.9   0.4    1.9  2  PH        PH domain


Domain annotation for each model (and alignments):
>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.4   6.9e-11   1.2e-06       3     104 ..     369     468 ..     367     469 .. 0.87
   2 ?   -3.0   0.0       0.6   1.1e+04      29      58 ..     629     660 ..     612     674 .. 0.65

  Alignments for each domain:
  == domain 1  score: 28.9 bits;  conditional E-value: 6.9e-11
                 EEEEEEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSS...TEEEEEEESSHHHHHHHHH CS
          PH   3 keGwLlkkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverng...srtyllqasseeerkeWik 98 
                 + G L +k++  k s+   w+vL+ + l  +k+   +k+  p +s++ls+ + +    +++     +f+l+  +++     ++++++++s e++ +W++
  KHJ31769.1 369 RAGLLERKSKYLK-SYTAGWYVLTPTHLHEFKSI--DKSQAPIMSLNLSEQKLKLF--SKSQSASDKFVLVGRQTGVmhrGHSWVFRCESYESMMSWYE 462
                 7799999999999.********************..99999999999999999988..89999999999944433335444****************** PP

                 HHHHHH CS
          PH  99 aiqsai 104
                 +++s+i
  KHJ31769.1 463 TLKSLI 468
                 ***987 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.6
                 E..EEEESSTTCTTESSEEEEEESTTEEEEEE CS
          PH  29 e..llyykndksekdkepkgsislsncevvev 58 
                 +  l++ ++++ +++ +++ s +++n+ev+++
  KHJ31769.1 629 KiqLSILEESPVPSKTTRTLSAEIDNIEVRDE 660
                 33344444445566667777888888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (747 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       860  (0.047967); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.31s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 5106.77
//
Query:       KHJ31770.1  [L=388]
Description: putative dihydrolipoamide succinyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-76  257.1   0.0    1.7e-76  256.8   0.0    1.1  1  2-oxoacid_dh     2-oxoacid dehydrogenases acyltransferase (ca
    7.4e-16   57.7   0.1    1.3e-15   56.9   0.1    1.5  1  Biotin_lipoyl    Biotin-requiring enzyme
    0.00034   21.3   0.1       0.18   12.5   0.0    2.4  2  HlyD_3           HlyD family secretion protein
    0.00048   19.9   0.2        0.3   10.9   0.0    2.5  2  Biotin_lipoyl_2  Biotin-lipoyl like
  ------ inclusion threshold ------
        1.2    9.5   5.9        1.5    9.3   0.0    2.7  3  DUF3614          Protein of unknown function (DUF3614)


Domain annotation for each model (and alignments):
>> 2-oxoacid_dh  2-oxoacid dehydrogenases acyltransferase (catalytic domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  256.8   0.0   4.6e-80   1.7e-76       2     233 .]     155     388 .]     154     388 .] 0.98

  Alignments for each domain:
  == domain 1  score: 256.8 bits;  conditional E-value: 4.6e-80
                   XXXXXXXXXXXXXXXXXXXXXXX.XXXEEEEEEEEE-HHHHHHHHHHHHHHHHTT-----HHHHHHHHHHHHHHH-GGGG-EE.EES..EEEE--SS CS
  2-oxoacid_dh   2 keeervplsgirkaiakrlteskqeiphftlsdevdvtallelrkelkekeakeekakltlldflikavalAlkefPelnasvdeee..keivvkkh 96 
                   +ee+rv+++++r +ia+rl++s+++++ +t+++evd++al+++rk +k++  k++++kl ++  + +a +lA+++ P +nas+++ +  ++iv+++ 
    KHJ31770.1 155 REERRVKMNRMRLRIAERLKQSQNTAASLTTFNEVDMSALIDFRKLYKDEVLKKSNVKLGFMGAFSRASVLAMRDIPSVNASIEGPNggDTIVYRDF 251
                   5899***********************************************98888***************************87777789****** PP

                   --EEEE--------EEEE--GGG--HHHHHHHHHHHHHHHTTT---GGGTSS-SEEEE---------------TT-SEEEEE---.B--TTSTT-HT CS
  2-oxoacid_dh  97 vniGvAvatprGLlvPviknadkkslleiakelkelaekaregklkpedleggtftisNlGmlGvtsftPiinppqvaIlgvgrikerpvvkegelv 193
                   v++++Avat++GL++Pv++na++++l+ i++ + el +kare++l+ ed+ ggtftisN G++G+ ++tPiin pq+a+lg+++ikerpv+ + ++ 
    KHJ31770.1 252 VDLSIAVATEKGLVTPVVRNAETLDLIGIESTISELGKKARENRLTIEDMAGGTFTISNGGVFGSLMGTPIINLPQTAVLGLHAIKERPVAIDSQIL 348
                   ************************************************************************************************* PP

                   ---EEEEEEEEETTT--HHHHHHHHHHHHHTT-HHXXXXX CS
  2-oxoacid_dh 194 vrkvmtlslsaDHRvidGaeaarFlntlkkllenpeelll 233
                   +r++m+l l++DHR++dG ea++Fl ++k+++e+p ++ll
    KHJ31770.1 349 IRPMMYLALTYDHRLLDGREAVQFLVKIKEYIEDPRRMLL 388
                   *************************************985 PP

>> Biotin_lipoyl  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.9   0.1   3.8e-19   1.3e-15       9      73 .]       2      67 ..       1      67 [. 0.96

  Alignments for each domain:
  == domain 1  score: 56.9 bits;  conditional E-value: 3.8e-19
                   EEEEEE..ECSESSSTTCEE-TTSEEEEEECTTEEEEEEBSSSEEEEEESSTTTEEE-TTCEEEEE CS
  Biotin_lipoyl  9 Gesveeg.vvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdtvevgdllaki 73
                   +es+ eg   ++++k Gd V +++ +a++e++K    ++ap+aG++ e+l++e dtv+vg+ l++i
     KHJ31770.1  2 AESISEGtLKQWTKKIGDYVRQDEEIATIETDKIDLAVNAPEAGTIRELLANEEDTVTVGQDLLRI 67
                   68999999*****************************************************99876 PP

>> HlyD_3  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.0    0.0039        14       7      33 ..       7      33 ..       4      39 .. 0.86
   2 !   12.5   0.0     5e-05      0.18       2      30 ..      39      67 ..      38      72 .. 0.94

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0039
      HlyD_3  7 dGvvvelnveegevvqagdelleiipp 33
                 G+++++  + g++v++ +e+++i  +
  KHJ31770.1  7 EGTLKQWTKKIGDYVRQDEEIATIETD 33
                59999*******************854 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 5e-05
      HlyD_3  2 lrApvdGvvvelnveegevvqagdellei 30
                ++Ap +G++ el ++e++ v+ g+ ll+i
  KHJ31770.1 39 VNAPEAGTIRELLANEEDTVTVGQDLLRI 67
                89*************************99 PP

>> Biotin_lipoyl_2  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   8.4e-05       0.3      10      44 ..       7      41 ..       2      44 .. 0.90
   2 !    8.6   0.0   0.00044       1.6       5      34 ..      39      68 ..      37      72 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 8.4e-05
  Biotin_lipoyl_2 10 sGrVaqlnVkdGqrVkaGdvLaelDsralqlalaq 44
                      G+++q+  k G++V +   +a++++++ +la++ 
       KHJ31770.1  7 EGTLKQWTKKIGDYVRQDEEIATIETDKIDLAVNA 41
                     69****************************99975 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00044
  Biotin_lipoyl_2  5 IaapvsGrVaqlnVkdGqrVkaGdvLaelD 34
                     + ap +G++ +l+  + + V  G+ L++++
       KHJ31770.1 39 VNAPEAGTIRELLANEEDTVTVGQDLLRIE 68
                     788899*********************996 PP

>> DUF3614  Protein of unknown function (DUF3614)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.2      0.48   1.7e+03      69      96 ..      86     110 ..      65     120 .. 0.64
   2 ?    0.9   0.9      0.16   5.6e+02      76     129 ..     121     169 ..     110     187 .. 0.67
   3 ?    9.3   0.0   0.00041       1.5      80     136 ..     252     307 ..     216     317 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.48
     DUF3614  69 lkspsrvvvkkvpvssekssss.rgassP 96 
                 +      v kk+p+ss+ + s+ +++  P
  KHJ31770.1  86 IDT----VSKKIPISSDSPKSNtEDVKPP 110
                 333....4489999999998874555555 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.16
     DUF3614  76 vvkkvpvssekssssrgassPrvdsvrssgaivvggvvhevlkkiregrlrfrv 129
                 + +k + ss+  s+s++ s+P++  + ss     +  ++e + +++ +r+r r+
  KHJ31770.1 121 STEKSSPSSKIASKSEDLSTPSR--TNSSL--TASLGSRE-ERRVKMNRMRLRI 169
                 45666667777777788888887..44443..34444555.5677777776655 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00041
     DUF3614  80 vpvssekssssrgassPrvdsvrssgaivvggvvhevlkkiregrlrfrvgkimrfs 136
                 v++s ++  + +g ++P v  ++  ++i + +   e+ kk+re+rl+ +    + f+
  KHJ31770.1 252 VDLSIAVATE-KGLVTPVVRNAETLDLIGIESTISELGKKARENRLTIEDMAGGTFT 307
                 6777788888.9***********************************8766666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       764  (0.0426125); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 2945.99
//
Query:       KHJ31771.1  [L=295]
Description: hypothetical protein EV44_g3082 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0072   16.8   3.5        3.1    8.3   0.0    3.7  4  NPV_P10       Nucleopolyhedrovirus P10 protein
     0.0096   16.0   1.2      0.022   14.8   0.6    1.9  2  Nup54         Nucleoporin complex subunit 54
  ------ inclusion threshold ------
      0.025   14.9   3.0        5.2    7.4   0.5    3.0  2  BLOC1_2       Biogenesis of lysosome-related organelles compl
      0.065   13.9   4.8       0.51   11.0   0.2    3.9  4  SlyX          SlyX
      0.095   12.7   8.2       0.79    9.8   2.7    3.0  2  Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C
      0.095   13.1   1.4        1.4    9.4   0.0    2.9  2  H-kinase_dim  Signal transducing histidine kinase, homodimeri
      0.096   13.1   5.1      0.056   13.8   0.9    2.5  3  Syntaxin_2    Syntaxin-like protein


Domain annotation for each model (and alignments):
>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       1.2   3.1e+03      51      58 ..      95     102 ..      72     128 .. 0.55
   2 ?    4.8   0.4     0.016        40      26      59 ..     126     159 ..     108     169 .. 0.83
   3 !    8.3   0.0    0.0012       3.1      16      56 ..     165     213 ..     160     228 .. 0.85
   4 ?    2.3   0.1     0.094   2.4e+02      14      51 ..     233     270 ..     219     275 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.2
     NPV_P10  51 Laeletkv 58 
                 L++letk+
  KHJ31771.1  95 LTSLETKL 102
                 34444422 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.016
     NPV_P10  26 qvddvqenlpdvtelnekLdaqsaqLaeletkve 59 
                 ++d + +nl d++  ++ Ld++s+ + +let+++
  KHJ31771.1 126 KIDLLGQNLIDLQIKSDLLDQMSDRIGTLETNLN 159
                 5677788888888777889999999999999876 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.0012
     NPV_P10  16 vddkVdalqqqv........ddvqenlpdvtelnekLdaqsaqLaelet 56 
                 +d+ +  lq+qv        +++++n ++++e++ kL ++ + +a+l++
  KHJ31771.1 165 IDTLIGDLQSQVyqpspglaKQITQNQRKIKEISLKLPELRDRVASLSS 213
                 577788899999999999999*********************9999987 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.094
     NPV_P10  14 kavddkVdalqqqvddvqenlpdvtelnekLdaqsaqL 51 
                 +++++ V+ l+ +v++ +   pdv +  ++L+++ a+L
  KHJ31771.1 233 NDLSKIVQELELEVKSYHGLPPDVRQARTELENLRAEL 270
                 45666777888888888888888888888888888777 PP

>> Nup54  Nucleoporin complex subunit 54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.8   4.5e+03      52      68 ..     144     160 ..     130     173 .. 0.60
   2 !   14.8   0.6   8.7e-06     0.022      34     133 ..     183     280 ..     180     285 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.8
                 HHHHHHHHHHHHHHHHH CS
       Nup54  52 lkeisdrleeleqkhql 68 
                 l+++sdr+  le++ ++
  KHJ31771.1 144 LDQMSDRIGTLETNLNT 160
                 34444444444433333 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 8.7e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SS---SSHHHHHHHHHHHHHHHS-HHH.HHH CS
       Nup54  34 LakRvkaQqkevaqhrerlkeisdrleeleqkhqletsvrlekakkrhvelshRllrllrkleilrsrgyaldaeEeelrarletleaqlndpaqlkgr 132
                 Lak  ++ q+++++   +l e++dr+ +l+ + +   +v l+++k +++     l ++++ le+  ++  +l ++ +++r++le+l a+l +  +++ r
  KHJ31771.1 183 LAKQITQNQRKIKEISLKLPELRDRVASLS-SASEGSTVTLQDVKLEEKSFND-LSKIVQELELEVKSYHGLPPDVRQARTELENLRAELYESISMRDR 279
                 889999999*********************.888888999*******999875.99*******8866666777*****************987777777 PP

                 H CS
       Nup54 133 v 133
                 +
  KHJ31771.1 280 M 280
                 6 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.1    0.0034       8.8      43      91 ..     103     151 ..      66     159 .. 0.90
   2 ?    7.4   0.5     0.002       5.2      31      86 ..     189     244 ..     182     251 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0034
     BLOC1_2  43 aaslekkleklnekyeelqpylqqidqiekqvteLeeavseLDeyskeL 91 
                 + + ++ le+l++++ +l+  + +id + +++ +L+   + LD++s ++
  KHJ31771.1 103 TRDGKTCLEALSNLSVTLNRPFPKIDLLGQNLIDLQIKSDLLDQMSDRI 151
                 5566788999*********************************999875 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.002
     BLOC1_2  31 aasekykklkdvaaslekkleklnekyeelqpylqqidqiekqvteLeeavseLDe 86 
                 + ++k+k+++ ++ +l++ +  l++ +e     lq ++  ek+ ++L ++v+eL+ 
  KHJ31771.1 189 QNQRKIKEISLKLPELRDRVASLSSASEGSTVTLQDVKLEEKSFNDLSKIVQELEL 244
                 56789999999999999999999999999999999999999999999999999985 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.63   1.6e+03       5      18 ..      95     108 ..      93     150 .. 0.59
   2 ?    1.4   0.0       0.2   5.2e+02       6      28 ..     156     178 ..     147     180 .. 0.70
   3 ?   11.0   0.2    0.0002      0.51      22      57 ..     183     218 ..     181     230 .. 0.89
   4 ?   -1.3   0.0       1.3   3.4e+03      25      33 ..     238     246 ..     223     278 .. 0.58

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.63
                 HHHHHHHHHHHHHH CS
        SlyX   5 leeLEiklafqedt 18 
                 l+ LE+kl+   +t
  KHJ31771.1  95 LTSLETKLTRDGKT 108
                 56777777655444 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.2
                 HHHHHHHHHHHHHHHHHHHHHHH CS
        SlyX   6 eeLEiklafqedtieeLndvvae 28 
                 ++L ++l + + +i +L+ +v++
  KHJ31771.1 156 TNLNTELGYIDTLIGDLQSQVYQ 178
                 34556678889999999988886 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 0.0002
                 HHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXXXX CS
        SlyX  22 Lndvvaeqqqqidrlqrqlrllaerlkeleessgas 57 
                 L +++++ q++i+++  +l +l++r+++l+++s++s
  KHJ31771.1 183 LAKQITQNQRKIKEISLKLPELRDRVASLSSASEGS 218
                 7899**************************998865 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 1.3
                 HHHHHHHHH CS
        SlyX  25 vvaeqqqqi 33 
                 +v e + ++
  KHJ31771.1 238 IVQELELEV 246
                 444433333 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.7   0.00031      0.79      29     101 ..      95     176 ..      70     178 .. 0.83
   2 ?    4.7   0.3     0.011        28      37      93 ..     191     269 ..     181     292 .. 0.48

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00031
  Baculo_PEP_C  29 nvqilaqlatlldaietqLnalsedlksllaeldt........rld.tlltnLtdalnalqdtlrneLtnlnsiltnLlssv 101
                   ++++ ++l+++ ++  + L++ls  l++  +++d         +++ +ll++++d + +l+++l++eL  +++ + +L+s+v
    KHJ31771.1  95 LTSLETKLTRDGKTCLEALSNLSVTLNRPFPKIDLlgqnlidlQIKsDLLDQMSDRIGTLETNLNTELGYIDTLIGDLQSQV 176
                   566677788888888888888888888888888878888886655427999*****************************98 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.011
  Baculo_PEP_C  37 atlldaietqLnalsedlksllaeldt................rldtlltnLtdalnalq.............dtlrneLtnlnsi 93 
                   ++ +++i  +L +l +++ sl+++ +                 +       L++ +++l+              + r+eL+nl ++
    KHJ31771.1 191 QRKIKEISLKLPELRDRVASLSSASEGstvtlqdvkleeksfnD-------LSKIVQELElevksyhglppdvRQARTELENLRAE 269
                   44455555555555555555555444455656656333332223.......44444444333333335554444444444444433 PP

>> H-kinase_dim  Signal transducing histidine kinase, homodimeric domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00054       1.4      10      67 ..     126     177 ..     119     179 .. 0.87
   2 ?    1.5   0.3      0.15   3.9e+02      48      63 ..     228     243 ..     185     276 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00054
  H-kinase_dim  10 rlDyLlnlvGElVitkarLnqsleefrfenglkasvtelksslqnlgrisgeLQegvm 67 
                   ++D L     +l i+   L q++++++      ++ t+l+ +l  ++ ++g+LQ++v 
    KHJ31771.1 126 KIDLLGQNLIDLQIKSDLLDQMSDRIG------TLETNLNTELGYIDTLIGDLQSQVY 177
                   677777777777788888999999999......9*********************996 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.15
  H-kinase_dim  48 lksslqnlgrisgeLQ 63 
                    ++s++ l++i++eL 
    KHJ31771.1 228 EEKSFNDLSKIVQELE 243
                   5667777888888875 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1      0.55   1.4e+03      53      88 ..      79     115 ..      49     122 .. 0.60
   2 ?   13.8   0.9   2.2e-05     0.056       6      91 ..     156     247 ..     141     252 .. 0.83
   3 ?    0.0   0.0      0.43   1.1e+03      12      48 ..     239     276 ..     232     294 .. 0.54

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.55
  Syntaxin_2  53 lkklsqldnsssds....qqklqkekLkkdfkealqeFqk 88 
                 l++l++ + +   +         + kL++d k+ l+ + +
  KHJ31771.1  79 LEQLQSSTAK---DpdidLLTSLETKLTRDGKTCLEALSN 115
                 3333333333...233232223667777777777666655 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 2.2e-05
  Syntaxin_2   6 qkinsnvstleklvkqLgtk..kdteelreklhelieeinelikktnellkklsqldnsssds....qqklqkekLkkdfkealqeFqkiqr 91 
                 +++n+ +  ++ l+ +L+++  + ++ l +++ +++ +i+e++ k  el  ++++l+  s++s    q    +ek  +d+++++qe++  ++
  KHJ31771.1 156 TNLNTELGYIDTLIGDLQSQvyQPSPGLAKQITQNQRKIKEISLKLPELRDRVASLSSASEGStvtlQDVKLEEKSFNDLSKIVQELELEVK 247
                 567888888888888898888888**********************************9999977755555777778888888888765555 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.43
  Syntaxin_2  12 vstleklvkq.Lgtkkdteelreklhelieeinelikk 48 
                 v++le  vk+  g + d ++ r +l++l+ e+ e i+ 
  KHJ31771.1 239 VQELELEVKSyHGLPPDVRQARTELENLRAELYESISM 276
                 44555555553444556666666666666655555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       843  (0.0470188); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 2293.24
//
Query:       KHJ31772.1  [L=392]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2813.81
//
Query:       KHJ31773.1  [L=337]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.33   10.8   4.7       0.58   10.0   4.7    1.4  1  DASH_Spc19  Spc19


Domain annotation for each model (and alignments):
>> DASH_Spc19  Spc19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   4.7   3.2e-05      0.58      37     131 ..      95     190 ..      66     214 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 3.2e-05
                 HHH-------TTTHHHHHHHHHHHTTTHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHT-XXXXXXXXXXXX....XXXX CS
  DASH_Spc19  37 kttrvFeLipesdleaakaslaeeiePqiee.llekaekeleklerreetLkaklelqegrlsnaesskkeeeeseeskeeeeeeenkeeekskkk 131
                 + t  +e i+ ++++aa ++ a  i+ q++  l+  ++k  +  +  ++tL+ k   q++  + +++++  + + +e++++++ ++++++ ksk+ 
  KHJ31773.1  95 QFTTLYESISDPEIRAAMNEAAVGIKEQLRAiLTGDIKKATNPSQPNRKTLIPKTVEQKKPTKTKDQTAMPTGQYKEQSQTNQGASANKNIKSKAA 190
                 67889************************9736679****************************99999888888888877666666555554433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1568  (0.0874561); expected 358.6 (0.02)
Passed bias filter:                      673  (0.037537); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 2346.78
//
Query:       KHJ31774.1  [L=953]
Description: putative ankyrin repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.4e-10   38.8   0.2    4.1e-09   36.4   0.1    2.4  2  TIG       IPT/TIG domain


Domain annotation for each model (and alignments):
>> TIG  IPT/TIG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.39     7e+03      53      80 ..     527     557 ..     524     562 .. 0.76
   2 !   36.4   0.1   2.3e-13   4.1e-09       1      74 [.     818     890 ..     818     898 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.39
         TIG  53 lvcttPpgpsg.llnvsvlvdg..aqlrsdn 80 
                 ++c++    ++ +++v+++ ++  ++l+ ++
  KHJ31774.1 527 IACYCRHQNEKtGFQVIFTLKDyqDNLIAQA 557
                 78999999977799***99999776665555 PP

  == domain 2  score: 36.4 bits;  conditional E-value: 2.3e-13
         TIG   1 PvissisPnsgsasgGttititGtnFgtnssdssvtiggtpctvtasvssttlvcttPpgp.sgllnvsvlvdg.a 74 
                 P+i +  P+ g+ +gG  +t  G +F   ++ + v++g+ ++t+t+++ +t+lvc++Pp p +g+++v+++++  +
  KHJ31774.1 818 PTIHKMIPSEGPKAGGIEVTCLGIGF---VQGLEVMFGDIKATTTTFWGETSLVCLLPPSPfAGNYPVTFKHQHqQ 890
                 99************************...********************************888********9942 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (953 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       792  (0.0441742); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.26s 00:00:01.00 Elapsed: 00:00:00.43
# Mc/sec: 6636.51
//
Query:       KHJ31775.1  [L=694]
Description: putative nadph-cytochrome p450 reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-64  216.8   0.0      4e-64  216.2   0.0    1.3  1  FAD_binding_1  FAD binding domain
    1.6e-33  115.9   0.7    3.5e-33  114.8   0.7    1.6  1  Flavodoxin_1   Flavodoxin
    1.6e-20   73.8   0.0    1.4e-19   70.8   0.0    2.2  2  NAD_binding_1  Oxidoreductase NAD-binding domain


Domain annotation for each model (and alignments):
>> FAD_binding_1  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.2   0.0   6.8e-68     4e-64       2     222 .]     271     490 ..     270     490 .. 0.98

  Alignments for each domain:
  == domain 1  score: 216.2 bits;  conditional E-value: 6.8e-68
                    --BTTB-EEEEEEEEEE---.-SS--EEEEEEE-TTBT----TT-EEEE-----HHHHHHHHHHHT--T..T-EEEEEESSTT..S--SSSSSEEH CS
  FAD_binding_1   2 pfdakkvflakvlknreLtkpesernvihveldisdsglkYetGdhlgvypsNneelVeellellgldpkadevvelkaldeesaekeprleptTl 97 
                    pf+a+++++a+++++reL++ + +rn++h+eldisds+l Y+tGdh++v+p N++ +V+++l++ gl  k+++v+++kald+  + + p+++ptT+
     KHJ31775.1 271 PFNAQNPYIAPIVASRELFN-DPHRNCLHLELDISDSNLDYQTGDHVAVWPTNSDRDVDQFLKITGLLSKRNTVINVKALDQ--TSRVPFPTPTTY 363
                    899*****************.************************************************************6..8*********** PP

                    HHHHHHTB--SS---HHHHHHHGGG-SSHHHHHHHHHHHH-..HHHHHTTTTT--HHHHHHHHHTT---TTS-HHHHHHHS-B---EEEEB-S-TT CS
  FAD_binding_1  98 rqalkyylditgppskqlleaLaefaseeeekqkLekLssd..egakeykelklneartllevleefpsvklplefLlevlpqLkpRyYSiSsssk 191
                    +++ +yy++i  ++s+q++  La+fa++++ k ++ kL++d  +++ ++++++ln a++l +++ ++ + ++p++ ++e l +L+pRyYSiSsss 
     KHJ31775.1 364 DAVSRYYMEINAAVSRQFIATLAPFAPTDDVKTEMIKLGNDkdYFQIKVSSRYLNIAQVLEDISGGREWNRIPFSAFIEGLNKLQPRYYSISSSSL 459
                    ****************************************999***************************************************** PP

                    TTTTEEEEEEE--EE---SSS--EE-HHHHH CS
  FAD_binding_1 192 vhpdevhltvvVveyetdgegrirkGvcsny 222
                    v+++++ +t+vV++ e  g   + kGv++ny
     KHJ31775.1 460 VEKKKISITAVVESLEIPGRPTALKGVTTNY 490
                    ****************98888899*****98 PP

>> Flavodoxin_1  Flavodoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.8   0.7   5.8e-37   3.5e-33       1     143 []      68     214 ..      68     214 .. 0.96

  Alignments for each domain:
  == domain 1  score: 114.8 bits;  conditional E-value: 5.8e-37
                   EEEETSSSHHHHHHHHHHHHHHH.TTTEEEEEEEEGTTSC.GGGGGTHSEEEEEEEEETTTBEEGGGHHHHHHHHHHHCHH.....GCCSTTTTEEE CS
  Flavodoxin_1   1 ilYgSetGnteklAkqlaeelge.hgfnadvvslsdydes.lseieeealllvvtsTfgnGdppengesffqdllelkgde.....ledgdlsgvrf 90 
                   i+YgS+tG++e++A +la+e ++  g+++++ +l+dyd++ l++++e++++++v sT+g+G+p++n+   f+++++ + ++      ++ +l+  +f
    KHJ31775.1  68 IFYGSQTGTAEDFATRLAKEGKArFGLETMAADLEDYDYEnLDHFPEDKVAIFVLSTYGEGEPTDNAV-DFYQFITGQ-PTdsftlGKEHPLESFNF 162
                   8********************987899************9**************************99.999999999.66799997779******* PP

                   EEEEEECTTSSSTTHHHHHHHHHHHHTTCEEESSSEEEETTSTHGHHHHHHHH CS
  Flavodoxin_1  91 avfglGdsayenFcaagkkldekleelGaerllkllegdednqegqeeafrkW 143
                     fglG+ +ye+F+ +++ +   le lGa+r++k +egd+    ++ee+f +W
    KHJ31775.1 163 VAFGLGNNTYEHFNSMVRNVTAALESLGAQRIGKIGEGDDGA-GTMEEDFLAW 214
                   ****************************************99.899****999 PP

>> NAD_binding_1  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.21   1.2e+03      14      37 ..      55      75 ..      51      90 .. 0.72
   2 !   70.8   0.0   2.3e-23   1.4e-19       1     107 [.     546     656 ..     546     658 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.21
                   HHHHHHHHCTTCSEEEEEEEESSG CS
  NAD_binding_1 14 vlraileeakdktkvvlvyGnrte 37
                   +++++   a+  +++v++yG +t 
     KHJ31775.1 55 IVEKM---AETGKNCVIFYGSQTG 75
                   44444...446899******9975 PP

  == domain 2  score: 70.8 bits;  conditional E-value: 2.3e-23
                    EEEEGGGGHHHHHHHHHHHHHCT...TCSEEEEEEEESSGC.GSTTHHHHHHHHHHCTTEEEEEEEESSCTTTSSSEESSHHHHHHHHHHH...HS CS
  NAD_binding_1   1 miagGtGiaPvrsvlraileeak...dktkvvlvyGnrtee.dllyreeleelakklpgrlkvvavvsreeagweggkgrvqdalleells...lk 89 
                    m+++GtG+aP+r+++r+++++ak   + ++  l++G+r++  d+ly++e+ee+++ l +++++v++ sre+      k +vqd+lle++     l 
     KHJ31775.1 546 MVGPGTGVAPFRGFIRERAAKAKsriNVGNSLLFFGCRRQTeDFLYKDEWEEYKRDLGDKFTLVTAFSRESTP----KAYVQDRLLEHAQVvnqLL 637
                    9*******************97779988999******98877************************8877766....69******99877788988 PP

                    STTEEEEEEC.SHHHHHHH CS
  NAD_binding_1  90 keethvyvCG.ppgMikav 107
                    ++++ +yvCG + +M+kav
     KHJ31775.1 638 LSKAYFYVCGdAANMAKAV 656
                    9*********999***997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (694 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       611  (0.0340789); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.41
# Mc/sec: 5040.19
//
Query:       KHJ31776.1  [L=397]
Description: hypothetical protein EV44_g3418 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-08   33.8   0.0    4.6e-07   29.7   0.0    2.2  1  RVT_2       Reverse transcriptase (RNA-dependent DNA polymera
  ------ inclusion threshold ------
      0.078   12.3   0.1       0.16   11.2   0.1    1.5  1  Scramblase  Scramblase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   5.1e-11   4.6e-07      11     179 ..     198     389 ..     186     396 .. 0.76

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 5.1e-11
       RVT_2  11 drkaigsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaa........eeelvvhqldvdsafLnaeldee.vyvkqP 100
                 + +   +r v  +k +  ++   k+  v+q +s    e +    +P i+  s rLl+ +aa        ee +  +  dv  a+++++   + + + +P
  KHJ31776.1 198 NTRIYKARIVNEIKGKTTSKPYEKSSFVVQAYSDSGKESFLR-QSPTIQRASQRLLMCIAAslclrnskEETYETWLRDVTQAYIQSTSRLNrLILARP 295
                 55666677788888777777888*****************97.68*************99833333222234556678********9987665666777 PP

       RVT_2 101 pGfeid..............reeekvykLnkslyGlkqapllWn.ekidkvLkklgferseaesGlyvrgtgegklivalyvddlliagsdiki 179
                 +  +i+              + ++ v ++ k lyG+  a++ W+ +  +++++kl+++ s+    l++ +++++  iv++  dd l +g+++ i
  KHJ31776.1 296 ATEIIQqikpillklkkpipKGQDLVLRVIKPLYGISEAGTHWFfTYTTHFIEKLQLQTSTFDPCLFISTKSDEFGIVGMQTDDTLYVGNKSFI 389
                 6666551111111111111145688999999************735678899********************************9999987655 PP

>> Scramblase  Scramblase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   1.8e-05      0.16     106     148 ..       4      45 ..       1      55 [. 0.83

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 1.8e-05
  Scramblase 106 qeaeieapegttiGevlqkwhlwrrkyellnakreqvlsiegp 148
                 q+ e+     + +G v++ ++++rr y+++n+++++ l+i++ 
  KHJ31776.1   4 QTKEVPVEAHQSVGKVERYHKILRRSYDIINEETKE-LKIDKD 45 
                 6777878899**********************9754.888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 3120.74
//
Query:       KHJ31777.1  [L=445]
Description: putative pre-mrna-splicing factor cwc25 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-23   84.1   0.3    1.1e-23   84.1   0.3    4.8  4  CWC25     Pre-mRNA splicing factor
    3.2e-14   52.8  11.9    3.2e-14   52.8  11.9    4.8  4  Cir_N     N-terminal domain of CBF1 interacting co-repressor 


Domain annotation for each model (and alignments):
>> CWC25  Pre-mRNA splicing factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   4.3      0.34     3e+03      18      51 ..      22      55 ..      12      65 .. 0.66
   2 !   84.1   0.3   1.2e-27   1.1e-23       2     102 .]      65     156 ..      64     156 .. 0.81
   3 ?   -5.9   8.6         2   1.8e+04      70      80 ..     193     203 ..     160     294 .. 0.62
   4 ?   -5.6  12.5         2   1.8e+04      18      82 ..     320     381 ..     309     406 .. 0.49

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.34
       CWC25 18 aeeeneeyllGKkrvdkllegkdkaekkkkakas 51
                + ee++  l+++kr ++ +++ +++++k++ +++
  KHJ31777.1 22 VWEEEKKALEERKRTEQRIKELKEERAKEEIQSK 55
                5566777899999999999998876666644332 PP

  == domain 2  score: 84.1 bits;  conditional E-value: 1.2e-27
       CWC25   2 aerleWMYegpke.agaaeeeneeyllGKkrvdkllegkdkaekkkkakaskaesaaeqggaarle.kvansardtanklreDPllaIkkqeqealkal 98 
                 ++r++WMY+ p++ ++ ++ee+e yllGK+r+d+l++g++k++ +k++     ++      +++++ + +ns r++++k+reDPllaIkk+eq+a++a+
  KHJ31777.1  65 VDRVDWMYQCPANgHAGTTEEMEGYLLGKRRIDHLIKGDEKQKLEKQG-----FE------SSFMQsQNVNSIREINAKIREDPLLAIKKKEQAAYEAV 152
                 68*******996655569999*****************7765554421.....22......233332666999************************** PP

       CWC25  99 lknP 102
                 +++P
  KHJ31777.1 153 MNDP 156
                 **98 PP

  == domain 3  score: -5.9 bits;  conditional E-value: 2
       CWC25  70 nsardtanklr 80 
                 +++rd+ +k r
  KHJ31777.1 193 EEKRDSHRKRR 203
                 22222222211 PP

  == domain 4  score: -5.6 bits;  conditional E-value: 2
       CWC25  18 aeeeneeyllGKkrvdkllegkdkaekkkkakaskaesaaeqggaarlekvansardtanklreD 82 
                 a+  +eey    ++ d++ +  +k+++k+  + +k++s+++++ ++r  k + + ++ a+kl +D
  KHJ31777.1 320 ASHHREEYRSQDSHFDRAKNHRNKESAKE--NLHKNSSSSTDKDSERKRKLE-QMQQDASKLDQD 381
                 55566777666666655544433322222..222333333334444444443.333333333333 PP

>> Cir_N  N-terminal domain of CBF1 interacting co-repressor CIR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8  11.9   3.6e-18   3.2e-14       1      37 []      10      46 ..      10      46 .. 0.99
   2 ?   -2.7   0.7      0.81   7.2e+03      16      27 ..     193     204 ..     189     206 .. 0.57
   3 ?    2.0   1.7     0.028   2.5e+02      19      32 ..     360     373 ..     359     377 .. 0.84
   4 ?   -5.5   7.8         2   1.8e+04      17      36 ..     382     401 ..     380     402 .. 0.84

  Alignments for each domain:
  == domain 1  score: 52.8 bits;  conditional E-value: 3.6e-18
                SS-TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Cir_N  1 SWHPgllkNqerVWkaEqkaleEkkkieerkkeieeE 37
                SWHP l+ Nq+rVW++E+kaleE+k++e+r ke++eE
  KHJ31777.1 10 SWHPVLMSNQKRVWEEEKKALEERKRTEQRIKELKEE 46
                9***********************************9 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.81
                 HHHHHHHHHHHH CS
       Cir_N  16 aEqkaleEkkki 27 
                 +E++  ++k+++
  KHJ31777.1 193 EEKRDSHRKRRQ 204
                 455555555554 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.028
                 HHHHHHHHHHHHHH CS
       Cir_N  19 kaleEkkkieerkk 32 
                 k  e+k+k+e++++
  KHJ31777.1 360 KDSERKRKLEQMQQ 373
                 67899*******98 PP

  == domain 4  score: -5.5 bits;  conditional E-value: 2
                 HHHHHHHHHHHHHHHHHHHH CS
       Cir_N  17 EqkaleEkkkieerkkeiee 36 
                  +k l+  +k+e + +e+ee
  KHJ31777.1 382 REKRLAALEKQENLEREVEE 401
                 57888889999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2721  (0.151765); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                       149  (0.00831056); expected 17.9 (0.001)
Passed Fwd filter:                        57  (0.00317921); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.42u 0.35s 00:00:01.77 Elapsed: 00:00:00.55
# Mc/sec: 2418.12
//
Query:       KHJ31778.1  [L=488]
Description: putative cop9 signalosome complex subunit 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-19   69.8   1.1    3.7e-19   69.2   0.3    1.8  2  PCI       PCI domain
  ------ inclusion threshold ------
       0.48   10.7   3.5        3.4    8.0   0.1    4.1  6  TPR_2     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.4   1.3e+04      12      36 ..     166     190 ..     162     223 .. 0.60
   2 !   69.2   0.3   4.1e-23   3.7e-19       2     104 ..     314     415 ..     313     416 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.4
                 HTSHHHHHHHHHHHHHHHHHHTTHH CS
         PCI  12 sgnlsgfseelkdleeelladdgla 36 
                 ++++ +  + l++l +   +ddg+ 
  KHJ31778.1 166 RKDYVALTKKLRELHKACEKDDGTD 190
                 5666666677777744444444444 PP

  == domain 2  score: 69.2 bits;  conditional E-value: 4.1e-23
                 HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTTTE CS
         PCI   2 sysdllkalrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIrdgeirakidqesgi 100
                 +++dl+ a+++ ++ ++++  k + ++llad+++a+ ++++ +++r++++ +++ +y++++l+ ++k l+++  evE il+ lI d +i+++i+q++gi
  KHJ31778.1 314 AMTDLVDAYQRDDIHKYETVIKNN-SDLLADPFIAENINEVTRNMRTKAILRLVAPYTRFHLSFIEKSLQIPLAEVEDILSFLIVDMKIQGRINQQEGI 411
                 799*********************.************************************************************************** PP

                 EEEC CS
         PCI 101 vvfk 104
                 v+++
  KHJ31778.1 412 VEIR 415
                 *875 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.96   8.6e+03      16      25 ..      46      55 ..      42      56 .. 0.77
   2 ?    8.0   0.1   0.00038       3.4      12      30 ..      80      98 ..      77     101 .. 0.87
   3 ?   -2.5   0.0      0.89     8e+03      16      25 ..     124     133 ..     123     138 .. 0.83
   4 ?   -1.2   0.0      0.35   3.1e+03       5      17 ..     157     169 ..     154     170 .. 0.85
   5 ?   -2.4   0.0      0.79   7.1e+03      22      29 ..     220     227 ..     219     229 .. 0.78
   6 ?   -1.9   0.0      0.56     5e+03       8      24 ..     246     262 ..     246     262 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.96
       TPR_2 16 dyeeAleafe 25
                ++e+A++ f 
  KHJ31778.1 46 EPEDAIKEFL 55
                7899***996 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00038
       TPR_2 12 yklgdyeeAleafekAlel 30
                + lg+y++A e++ + l++
  KHJ31778.1 80 FLLGKYNKASEHYAELLSY 98
                789************9975 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.89
       TPR_2  16 dyeeAleafe 25 
                 dy +A++++e
  KHJ31778.1 124 DYPDAARCME 133
                 7999**9998 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.35
       TPR_2   5 ynlGlayyklgdy 17 
                   l+++y+ ++dy
  KHJ31778.1 157 IKLAKLYLDRKDY 169
                 6799*****9999 PP

  == domain 5  score: -2.4 bits;  conditional E-value: 0.79
       TPR_2  22 eafekAle 29 
                 +++++Ale
  KHJ31778.1 220 RLYNRALE 227
                 67999997 PP

  == domain 6  score: -1.9 bits;  conditional E-value: 0.56
       TPR_2   8 GlayyklgdyeeAleaf 24 
                 G+ ++   ++++A  +f
  KHJ31778.1 246 GKMHMSEENWKDAQSDF 262
                 6789999******8776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (488 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       857  (0.0477997); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3493.69
//
Query:       KHJ31779.1  [L=263]
Description: putative beta-subunit electron transfer flavoprotein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-33  116.2   0.0    1.9e-33  115.9   0.0    1.2  1  ETF       Electron transfer flavoprotein domain


Domain annotation for each model (and alignments):
>> ETF  Electron transfer flavoprotein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.9   0.0   1.1e-37   1.9e-33       4     181 ..      29     221 ..      26     222 .. 0.95

  Alignments for each domain:
  == domain 1  score: 115.9 bits;  conditional E-value: 1.1e-37
                 EE-EC.CCCE-HHHHHHHHHHHHHHHH.........HT.--EEEEEEES....S-CHHHHHHCT-SEEEEEE-GGGSS--CCHHHHHHHHHHHHC--SE CS
         ETF   4 laehgvdgklnpvdlealeaArrlkek.........ag.gevtavvvGppeaeealrealaamGadkvilvddpalagydaeatakalaalikkedpdl 92 
                 ++  gv+ +lnp+d+  +e+A++++e+          +  e++a+++Gpp+++e+lr+a+a mGad+ i+++  + ++ +++ +ak+la++++ke+++l
  KHJ31779.1  29 VVKTGVKHSLNPFDEISVEEAVKIRERnvkspssstPNvDEIIAFSIGPPRSVETLRTAMA-MGADRSIFIEVNDDEEPESLGVAKLLAKIVQKEKINL 126
                 677789********************999999888755689********************.************************************* PP

                 EEEESSCC.H..HHHHHHHHHHCT-EEEEEESEEEEETCC.EEEEEECCCCTEEEEEE-TSSSEEEEE-TTSS--.....--S-TT---EEEE--HHH CS
         ETF  93 vlagatai.g..kqvaprlAalLgvplitdvteleveggk.ltvtRpieggnglaevveadlpavltvrpgafep.....aaimaakkkeveevevad 181
                 v+ag+++i    + v+++l+ lLg++++ ++++++ ++++  +++++++g  g+ e+v  +lp v+t++ +++ep      + m+ak+k + ++++++
  KHJ31779.1 127 VIAGKQSIdSdaGSVGGMLSGLLGWGFAGQACNITFQKPNfCVIEKEVDG--GT-ETVRGSLPMVITTDLRLNEPryatlSNLMKAKRKIIDKLTPEE 221
                 ********55**************************97779*********..**.************************999********99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.21s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2028.06
//
Query:       KHJ31780.1  [L=330]
Description: putative cyclin domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0016   18.2   0.1     0.0047   16.7   0.0    1.8  2  Cyclin_N  Cyclin, N-terminal domain
  ------ inclusion threshold ------
       0.14   12.2   0.9        6.9    6.8   0.1    2.4  2  Cyclin_C  Cyclin, C-terminal domain


Domain annotation for each model (and alignments):
>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   5.2e-07    0.0047      24     126 ..      26     160 ..      13     161 .. 0.83
   2 ?   -2.4   0.1      0.41   3.7e+03      75      86 ..     216     227 ..     204     237 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 5.2e-07
                 SSS-HHHHHHHHHHHHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHH................................... CS
    Cyclin_N  24 pelnpemRailidwlvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKv................................... 87 
                 pel+++ R   +         ++l +++ + a ++l R+ ++ ++ k+++  v a+ ++l aK+                                   
  KHJ31780.1  26 PELQESIRYYTARLTQAAGILLRLPQNITAQANVLLFRYWAEVDLLKYEFSEVSAAVIYLTAKIssspralrgianvyayllspnsilspslperspis 124
                 5666666776666666777778999***************************************99999999999999999999999999997665555 PP

                 .HSSS---HHHHHHHTTTSS-HHHHHHHHHHHHHHTTT-- CS
    Cyclin_N  88 .eeisppkledlvyitdeafteeeilemErliLetLnfdl 126
                  ++ ++  l++ +yi     ++++i+ +E +iL++L f+ 
  KHJ31780.1 125 tPDPKSYYLSESAYI----TKRTQIIYLEGQILNALGFNT 160
                 544445555555555....45999**************95 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.41
                 HHHHHHHHHHHH CS
    Cyclin_N  75 lvgatcLllAaK 86 
                  ++++++++Aa+
  KHJ31780.1 216 QLATAAIFVAAR 227
                 578999999997 PP

>> Cyclin_C  Cyclin, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.1   0.00077       6.9      23      61 ..      54      92 ..      32     107 .. 0.79
   2 ?    3.9   0.1    0.0061        54      36      59 ..     206     229 ..     168     242 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.00077
                HHCHHCHHHHHHCSCCHCCS-HHHHHHHHHHHCCHHHHS CS
    Cyclin_C 23 rtlakylleltlldydflsyppSliAaaalllarstlns 61
                +++a+ ll     ++d+l+y  S++ aa+++l+ ++ +s
  KHJ31780.1 54 TAQANVLLFRYWAEVDLLKYEFSEVSAAVIYLTAKISSS 92
                5556666666667899****************9998544 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.0061
                 SCCHCCS-HHHHHHHHHHHCCHHH CS
    Cyclin_C  36 dydflsyppSliAaaalllarstl 59 
                 ++ +l  +p ++A+aa+++a +++
  KHJ31780.1 206 QAIYLTHQPCQLATAAIFVAAREI 229
                 444788999**********99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       457  (0.0254894); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2632.48
//
Query:       KHJ31781.1  [L=107]
Description: putative nucleosome binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.8e-22   77.9   0.1    5.8e-22   77.9   0.1    1.6  2  HMG_box    HMG (high mobility group) box
      3e-16   59.8   0.1    5.7e-16   58.9   0.1    1.5  1  HMG_box_2  HMG-box domain
     0.0063   16.4   0.0      0.011   15.7   0.0    1.3  1  CHDNT      CHDNT (NUC034) domain


Domain annotation for each model (and alignments):
>> HMG_box  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.6       1.5   8.7e+03      44      47 ..      17      20 ..       8      25 .. 0.57
   2 !   77.9   0.1   9.7e-26   5.8e-22       1      69 []      28      96 ..      28      96 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.5
                HHHH CS
     HMG_box 44 eeeK 47
                e++K
  KHJ31781.1 17 EKKK 20
                2222 PP

  == domain 2  score: 77.9 bits;  conditional E-value: 9.7e-26
                --SS--HHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     HMG_box  1 pkRplsafflfskeqraklkaenPelknaeiskklgekWkalseeeKkkYeekaekekaryekekpeyk 69
                pkR l+a+++f+ eqr+ ++ enP+++  +++k lg++Wk+l ee++ +Ye ka+++k+ry  ek++y+
  KHJ31781.1 28 PKRGLTAYMFFAIEQREIVRDENPGITFGQVGKLLGQRWKELDEEQRTPYEVKAAEDKKRYTDEKANYN 96
                8*******************************************************************6 PP

>> HMG_box_2  HMG-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.9   0.1   9.5e-20   5.7e-16       1      73 []      25      96 ..      25      96 .. 0.98

  Alignments for each domain:
  == domain 1  score: 58.9 bits;  conditional E-value: 9.5e-20
                ---.-SS--HHHHHHHTTHHHHHHHT---SSHHHHTGGGHHHHHHS-HHHHHHHHHHHHHHHHHHHH-SS--- CS
   HMG_box_2  1 pkkpkaarnAYalfvqemipelkrkGnpviglaevsklcsekWkalseeeKekYeekAkedkkrydrealtyd 73
                p+ pk+   AY++f+ e+++ ++ + np i ++ v kl++++Wk l ee++++Ye kA edkkry  e  +y+
  KHJ31781.1 25 PNAPKRGLTAYMFFAIEQREIVRDE-NPGITFGQVGKLLGQRWKELDEEQRTPYEVKAAEDKKRYTDEKANYN 96
                789**********************.******************************************99996 PP

>> CHDNT  CHDNT (NUC034) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.8e-06     0.011      11      50 ..      31      70 ..      30      73 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.8e-06
       CHDNT 11 nltnyKlFsqhvRPlllkenPkvavsklvmLvaakwrEFq 50
                +lt y  F    R ++  enP+++  ++ +L+  +w+E  
  KHJ31781.1 31 GLTAYMFFAIEQREIVRDENPGITFGQVGKLLGQRWKELD 70
                689999999999*************************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       968  (0.0539907); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 784.99
//
Query:       KHJ31782.1  [L=756]
Description: putative protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-48  164.8   0.0    3.9e-48  164.1   0.0    1.3  1  Pkinase        Protein kinase domain
    7.1e-22   77.9   0.0    1.2e-21   77.2   0.0    1.3  1  Pkinase_Tyr    Protein tyrosine kinase
     0.0091   15.9   0.0      0.016   15.2   0.0    1.3  1  APH            Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.027   14.1   0.0        4.8    6.7   0.0    2.2  2  FTA2           Kinetochore Sim4 complex subunit FTA2
       0.03   13.3   2.0      0.035   13.1   0.0    2.0  2  Haspin_kinase  Haspin like kinase domain
       0.11   11.8   0.0       0.43    9.8   0.0    1.8  2  Kinase-like    Kinase-like


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.1   0.0   1.3e-51   3.9e-48       4     264 .]     393     707 ..     391     707 .. 0.89

  Alignments for each domain:
  == domain 1  score: 164.1 bits;  conditional E-value: 1.3e-51
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH...HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkke...kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                  + lG G+ G+V  ++++++gk++AvK+++ ++  ++++   kkv++E  i  +l+h ni++ ++++ ek++ y v+ey++ + l+ ++   g++s++e
  KHJ31782.1 393 GKVLGAGAGGSVRLMKRSSDGKTFAVKEFRARHSCESEKdyaKKVTAEFCIGSTLHHANIIETLDIVCEKEKWYEVMEYAPYD-LFAIVM-TGKMSKNE 489
                 578***************************999988887899***************************************87.777775.599***** PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.....BCTTTSCGGGS-HHHHTTSCB.SHHHHHHHHHHHHHHHHH CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.....ltsfvgtseYlAPEvlkeney.skkvDvWslGvilyellt 192
                 +   + qil+++ ylH++g+ HrDlK +N+ ++e+g +Ki+DFG a+ ++   +     ++ +vg+  YlAPEv +e++y  +++D+Wsl++i  +++ 
  KHJ31782.1 490 ITCSFLQILNAVTYLHCMGLAHRDLKLDNVVVNEHGIMKIIDFGSASVFKYPFEsgitkASGIVGSDPYLAPEVYEERKYdPQPADIWSLAIIYCCMTL 588
                 **************************************************988889999999******************7789*************** PP

                 SS-STTTSSHHHHHHHHHHTHHHHHHHCT.........SHH...HHHTTS................................................. CS
     Pkinase 193 gkppfsgekgkekvekeldqlekilkilg.........etkeklpeasei................................................. 233
                 ++ p++  + +++ +k +      +  +g          t                                                           
  KHJ31782.1 589 RRFPWKLPRMTDNSYKLFSS----APSMGternllsykST---------Tdlvptpesppsiskkidssstpdlktndqpsvdtqkkpevikgpwrllr 674
                 ******76666644444444....3333312112223323.........23355555669999************************************ PP

                 ..-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 234 ..seeakdllkkllkkdpkkRltaeellqhpyl 264
                   ++e ++++ ++l+ +p+kR  ++e++++p++
  KHJ31782.1 675 llPRESRKIIGRMLEINPRKRALMSEIIEDPWV 707
                 ********************************6 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.2   0.0   3.9e-25   1.2e-21       3     195 ..     392     583 ..     390     616 .. 0.84

  Alignments for each domain:
  == domain 1  score: 77.2 bits;  conditional E-value: 3.9e-25
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH....HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee....keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkke 96 
                  lgk lG+Ga G+V   + +    ++  + avK ++++++ e+     ++++ e  i ++l+h ni++ l ++ ++e+ + v+ey+++  +   ++ k 
   KHJ31782.1 392 LGKVLGAGAGGSVRLMKRS----SDGKTFAVKEFRARHSCESekdyAKKVTAEFCIGSTLHHANIIETLDIVCEKEKWYEVMEYAPYDLFAIVMTGK- 484
                  7899*********988777....888999****976544333123377888899999******************************7766666665. PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET.TT.SSEEEETTSSTSGGGGS-HHHHHHSEEEHH.HHHHHH CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi.ek.ddeyvkkeeaklpvkWmapEslkekkftsk.sDvWsf 191
                     ++ +++++  lq+ +++ yL+ + l Hrdl   Nv+++e+ ++ki DfG a+   +  ++  +k+++   +  ++apE+ +e+k+  + +D+Ws 
   KHJ31782.1 485 ---MSKNEITCSFLQILNAVTYLHCMGLAHRDLKLDNVVVNEHGIMKIIDFGSASVFkYPfESGITKASGIVGSDPYLAPEVYEERKYDPQpADIWSL 579
                  ...9999*********************************************999883331334477777778899************96549***** PP

                  HHHH CS
  Pkinase_Tyr 192 Gvll 195
                  +++ 
   KHJ31782.1 580 AIIY 583
                  9974 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   5.2e-06     0.016     167     198 ..     508     537 ..     503     546 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 5.2e-06
                 EEE-SS-SGGGEEEC..TTEEEEE---TT-EE CS
         APH 167 vllHgDlhpgNllvdpddgrvtGviDfedagl 198
                 +l H+Dl+++N++v+  ++ +  +iDf+ a++
  KHJ31782.1 508 GLAHRDLKLDNVVVN--EHGIMKIIDFGSASV 537
                 688************..667778*****9975 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0    0.0032       9.4      25      81 ..     391     449 ..     365     455 .. 0.70
   2 ?    6.7   0.0    0.0016       4.8     142     214 ..     461     535 ..     435     536 .. 0.70

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0032
        FTA2  25 efleyLgkglhs..iVlkvkirgkeYALKlFrfleaeeleeaeedlkiprealkelasy 81 
                 ++ ++Lg+g+ +  +++k   +gk++A+K Fr  +  e e++++++ + ++++ +  ++
  KHJ31782.1 391 KLGKVLGAGAGGsvRLMKRSSDGKTFAVKEFRARHSCESEKDYAKKVTAEFCIGSTLHH 449
                 457888776555337899999*************9999998888888777777666665 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0016
        FTA2 142 drsralgeedgkkrpiraIVKelellkeqeelevsqlpkllrdlkklhklgIvvrDlkeenyidg.....kLvDlsaa 214
                 +++++    +  +  + aIV     +++++e+   ++ ++l+ +  lh  g+ +rDlk +n++ +     k++D+++a
  KHJ31782.1 461 EKEKWYEVMEYAPYDLFAIVMT--GKMSKNEI-TCSFLQILNAVTYLHCMGLAHRDLKLDNVVVNehgimKIIDFGSA 535
                 4566666677777888899988..55555555.566789**********************98542334467777765 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.8      0.57   1.7e+03       6      51 ..     318     362 ..     315     388 .. 0.73
   2 ?   13.1   0.0   1.2e-05     0.035     228     253 ..     509     534 ..     483     541 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.57
  Haspin_kinase   6 sleslksrssqsslkhktshssLqkfsssssessssnkislPvkdq 51 
                    s++s ++ ss++slk + s   L++f +  s s+ +   s  +++ 
     KHJ31782.1 318 SSNSNEELSSTHSLK-RGSMVDLKRFFKLGSRSKLKRGFSPGAPNL 362
                    778888999*****9.678999999977666666555555544444 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 1.2e-05
  Haspin_kinase 228 FEHRdLhldniLvdknlnvtlidlkl 253
                    + HRdL+ldn+ v++++ + +id+  
     KHJ31782.1 509 LAHRDLKLDNVVVNEHGIMKIIDFGS 534
                    67*********************965 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.33   9.9e+02      16      68 ..     392     445 ..     386     464 .. 0.78
   2 ?    9.8   0.0   0.00014      0.43     151     190 ..     495     534 ..     476     567 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.33
  Kinase-like  16 rgellkkgdrsvvfevkdqetgeplavkvfllps.easkkdlerlkeqelairl 68 
                   g++l+ g  + v + k    g+ +avk f       s+kd+ +   +e+ i  
   KHJ31782.1 392 LGKVLGAGAGGSVRLMKRSSDGKTFAVKEFRARHsCESEKDYAKKVTAEFCIGS 445
                  677888888888888888888999999999887768899999988888888765 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00014
  Kinase-like 151 lqlirlaanLqakglvhgkftvdnllldekgglmlggfta 190
                  lq+++ + +L+  gl h +++ dn++ +e+g +++ +f++
   KHJ31782.1 495 LQILNAVTYLHCMGLAHRDLKLDNVVVNEHGIMKIIDFGS 534
                  6999*******************************99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (756 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 5466.84
//
Query:       KHJ31783.1  [L=490]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
          2    8.4  10.5         30    4.6   0.0    2.8  2  DUF1451   Zinc-ribbon containing domain


Domain annotation for each model (and alignments):
>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0    0.0017        30      27      55 ..      46      74 ..      36      88 .. 0.85
   2 ?    1.7   9.6     0.014   2.4e+02     117     142 ..     359     384 ..     347     403 .. 0.95

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0017
     DUF1451 27 eaeeltkeelelvaeylkrDleeaarsle 55
                 +e+++kee++ +++yl++ ++++ +s +
  KHJ31783.1 46 YKEDIEKEEADVIRKYLQKAIAHLVASDN 74
                5799***************9999887655 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.014
     DUF1451 117 CekCgkelalkkteeippCpkCgate 142
                 C++C+ ++++++ ++ p C +Cg+t 
  KHJ31783.1 359 CKRCNGHHKIRTCSRAPSCGNCGSTM 384
                 ***********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       913  (0.0509231); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3439.40
//
Query:       KHJ31784.1  [L=353]
Description: putative nadp-dependent leukotriene b4 12-hydroxydehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-20   72.4   0.0    4.9e-20   71.8   0.0    1.3  1  ADH_zinc_N    Zinc-binding dehydrogenase
    2.6e-16   59.5   0.0    4.7e-16   58.6   0.0    1.4  1  ADH_N_2       N-terminal domain of oxidoreductase
    9.1e-07   30.0   0.0    1.7e-06   29.1   0.0    1.5  1  ADH_zinc_N_2  Zinc-binding dehydrogenase
  ------ inclusion threshold ------
      0.084   12.6   0.0       0.15   11.8   0.0    1.3  1  Rrp44_CSD1    Rrp44-like cold shock domain


Domain annotation for each model (and alignments):
>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.8   0.0   1.1e-23   4.9e-20       1     116 [.     171     293 ..     171     314 .. 0.85

  Alignments for each domain:
  == domain 1  score: 71.8 bits;  conditional E-value: 1.1e-23
                 HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH.TTESEEEETTTCHHHHHHHHHTTTSSEEEEEESSCSHHHHHHHHHCEEEEEEEEECSC..TSSEEE CS
  ADH_zinc_N   1 gvGlaavqlAkalGaeviavdsseeklelakk.lGadevinykeadlverikeltggegvdvvfecvGsgatleaalkllkpgGrlvvvGg..gkgeee 96 
                 +vG+++ q+Ak  G +vi+ ++s+ekl +  k l  d  +nyk++++ +++k+l  ++g+d++++ vG g+ leaal++l++ Gr+vv+G+   +++++
  KHJ31784.1 171 AVGQLVGQFAKREGLRVIGSVGSDEKLNFILKeLKFDGGFNYKTEQPADALKRLA-PQGIDIYYDNVG-GEHLEAALNVLNRYGRIVVCGMisDYNKQD 267
                 69*************************876555*********555**********.99**********.**********************87444444 PP

                 ...EEHHH...HHHTT-EEEEE-SSC CS
  ADH_zinc_N  97 ...fdlrn...lllkeksilGsllgs 116
                    f ++n    + k+++i+G+l+++
  KHJ31784.1 268 herFEVKNlilTIPKSLTIRGFLVSD 293
                 788999996644489*******9988 PP

>> ADH_N_2  N-terminal domain of oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.6   0.0   1.1e-19   4.7e-16       6     103 ..      10     113 ..       5     117 .. 0.83

  Alignments for each domain:
  == domain 1  score: 58.6 bits;  conditional E-value: 1.1e-19
     ADH_N_2   6 kkrpegaptes...dfeleeeelp.elkdGevlvralylSvDPymRgrmnd.aksyve.pvelgdvmrggavgeVveSknpdfkvGdlVvgllgwqdya 98 
                 kk p+g p +     +el+e +l  +  +G ++ ++ly S DPymR rm++  ks +  p+++g+++++ +++ V++S++ +f++G+l+vgll +++y+
  KHJ31784.1  10 KKVPDGIPVAGqdlAVELREFDLEsAAPAGGIVTKNLYASYDPYMRSRMSTpGKSFYRgPYDIGKPITSFVIATVLKSNSTAFSEGQLIVGLLPIEEYS 108
                 666777665431114689999987577899*******************9647888888***************************************9 PP

     ADH_N_2  99 vsdgk 103
                  ++ +
  KHJ31784.1 109 AVSRQ 113
                 88766 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.0   3.8e-10   1.7e-06       7     131 ..     210     346 ..     204     348 .. 0.76

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 3.8e-10
                   EETTSTTHH...HHH-TT-EEEEEES-HHHHH.HHHHHHEEEEEEEEE----.S-EEE-CHHHCTTT-EEEE--GGG...-...............- CS
  ADH_zinc_N_2   7 idyrtedfe...aatggegvDvvldtvggealleaslkvlpggGrlvsiggpplsaallkpakkrkgrsvkyeflfsmkas..............aq 86 
                   ++y+te+ +   + + ++g+D+ +d+vgge+l ea+l+vl+ +Gr+v+ g+ +  ++   ++++ k+  +++   +    +                
    KHJ31784.1 210 FNYKTEQPAdalKRLAPQGIDIYYDNVGGEHL-EAALNVLNRYGRIVVCGMISDYNKQDHERFEVKNLILTIPKSL----TirgflvsdpdigpkYF 301
                   57885555557878889*************99.*******999***988852223333333333333333333333....14445888889999977 PP

                   HHHHHHHHHHHHHHH----EEEEEEGGGHHHHHHHHHSS--SSEE CS
  ADH_zinc_N_2  87 adileelaalieeGklrpvvdrvfpleeaaeAhrylesgrarGKi 131
                   +++ + +++++++G l+   + + ++e+a + +  + +g+ +GK 
    KHJ31784.1 302 EERNRNVTEWLSDGSLKAKTSITDGIENADKGFVGMLQGSNFGKA 346
                   7778*****************9*********************96 PP

>> Rrp44_CSD1  Rrp44-like cold shock domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.3e-05      0.15      52      94 ..      84     128 ..      64     133 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.3e-05
                 SHHHHTS--TT-EEEEEE--GGG-B---SS-B-CCCSS..TT--T CS
  Rrp44_CSD1  52 gqknlnrafngdqvivellpqsewkapssivldsehfd..vndnp 94 
                   k    af   q+iv llp  e+ a s   l+se  +  v +np
  KHJ31784.1  84 VLKSNSTAFSEGQLIVGLLPIEEYSAVSRQFLESEFSQiqVIQNP 128
                 4566778***************************97541145555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       281  (0.0156729); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2584.70
//
Query:       KHJ31785.1  [L=70]
Description: hypothetical protein EV44_g3517 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       205  (0.011434); expected 358.6 (0.02)
Passed bias filter:                      183  (0.0102069); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 537.74
//
Query:       KHJ31786.1  [L=89]
Description: hypothetical protein EV44_g0248 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.57    9.2   2.3       0.59    9.2   2.3    1.1  1  B277            Domain of unknown function


Domain annotation for each model (and alignments):
>> B277  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.3   3.3e-05      0.59     208     238 ..      46      73 ..      27      85 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 3.3e-05
        B277 208 rvgsgpdlmmliigvvmgigigvaigfgian 238
                 r g gp+      gv +gigig+ ig+gi  
  KHJ31786.1  46 RTGPGPETG---FGVGIGIGIGIGIGIGIMT 73 
                 555566543...5777788888888888764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       323  (0.0180155); expected 358.6 (0.02)
Passed bias filter:                      177  (0.00987227); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.27s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 645.71
//
Query:       KHJ31787.1  [L=111]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       287  (0.0160076); expected 358.6 (0.02)
Passed bias filter:                      243  (0.0135535); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 806.49
//
Query:       KHJ31788.1  [L=116]
Description: hypothetical protein EV44_g3828 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 830.34
//
Query:       KHJ31789.1  [L=251]
Description: hypothetical protein EV44_g3216 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-06   27.5   0.0    6.7e-06   26.4   0.0    1.6  1  RNase_H   RNase H
    0.00031   21.4   0.9    0.00031   21.4   0.9    2.2  2  zf-RVT    zinc-binding in reverse transcriptase


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   7.4e-10   6.7e-06     113     142 ..      37      65 ..       7      66 .. 0.83

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 7.4e-10
                 SSEEEEEE-SCCSSSTHHHHHHHHHHHHHH CS
     RNase_H 113 kkkvqlkwvkgHaGvpkgNemaDrlAkeaa 142
                   + +++wv+gH+G+ +gN+ aD++Akeaa
  KHJ31789.1  37 GITTYIHWVPGHSGI-EGNKKADQAAKEAA 65 
                 56789**********.7***********98 PP

>> zf-RVT  zinc-binding in reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.9   3.4e-08   0.00031       3      80 ..     108     181 ..     106     184 .. 0.81
   2 ?   -2.5   0.1         1     9e+03      58      74 ..     228     245 ..     220     247 .. 0.62

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 3.4e-08
      zf-RVT   3 vksaYkllrekkekvklakliWkskappkvkfflWlllknrlptadnllkrgiesssrCqlCgqe.eEtieHlfleCpf 80 
                 ++++Ykll ++++ +k     Wk+ a    ++f   l +++  +++ l++ g + +++C++C+++   t++Hl+leC++
  KHJ31789.1 108 SRTTYKLLLNNNNMDKVVAGSWKALA---SRYF--QLKSGHAFINEFLHRIGKSDNNKCSFCSEAsPQTVKHLMLECRK 181
                 67788888888877777777777666...5555..5677888999********************9***********86 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1
      zf-RVT  58 ssrCqlCgqe.eEtieHl 74 
                 +  C++ +qe e  ++Hl
  KHJ31789.1 228 RIGCCIDEQEkEQEVSHL 245
                 456777777744455665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       861  (0.0480228); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1834.80
//
Query:       KHJ31790.1  [L=617]
Description: putative gpi mannosyltransferase 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.5e-82  275.6  31.5    1.1e-81  275.3  31.5    1.0  1  Glyco_transf_22  Alg9-like mannosyltransferase family
  ------ inclusion threshold ------
       0.13   11.8   0.1       0.37   10.4   0.1    1.7  1  Ig_6             Immunoglobulin domain


Domain annotation for each model (and alignments):
>> Glyco_transf_22  Alg9-like mannosyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  275.3  31.5   1.2e-85   1.1e-81       2     414 ..      19     500 ..      18     503 .. 0.89

  Alignments for each domain:
  == domain 1  score: 275.3 bits;  conditional E-value: 1.2e-85
  Glyco_transf_22   2 ifllllalrlllalltqtsfdpDEffqslEvahklvfgkgt...ltWEyspkygiRSylfllllalpyrllaelvadskiav.......lyapR 85 
                      ++++l+++r ++a l++t+f+pDEf+qslE+a +++fg++    +tWE+   +g+RS +++ ++a++y++ +++++  + ++       + +p 
       KHJ31790.1  19 VWKFLIIYRCINACLVRTFFQPDEFYQSLEPAWHMAFGTNSgawITWEW--DLGLRSSMHPSMFAVIYFIAHKFLKPFTGLPyiqniilTKLPN 110
                      6899****************************9999988753448****..************************9988888888988899*** PP

  Glyco_transf_22  86 lllallsalidyylfravcrkyg..seiakialllslsswglfvfstrtfsnslemlltsialyllsellsrenksss................ 161
                      l++a ++a++++y+++++++ yg  s ia+++ll+s++s   ++fstrtfsn+lem+lt+ al ++++ l+  +k ++                
       KHJ31790.1 111 LVQAYFAAIGEFYTWKLAEKIYGpsSCIAWTTLLISVLSPWQWFFSTRTFSNCLEMTLTLAALNFWPWSLLSDSKLHEthnetsknaisckshl 204
                      ****************99999963367*****************************************88777766668999************ PP

  Glyco_transf_22 162 ........nekylvavlliavlavliRptsallwlplvlflllrlvkkrsktf....lfliialvllvlllvlvlviliDslfYgkfvftplnf 243
                              + k+l + ll+a +a l Rpt++++w+ l++  + +l  k+          ++i  ++l+ ++ lv+++++D+l+Y+ ++f+p+n 
       KHJ31790.1 205 naeklnlkSVKQLRICLLLAGMASLLRPTNIVIWISLIVVQIGDLLTKKFRPTsignYYCLIREGILCSAFLLVISAICDRLYYKTWIFPPYNW 298
                      *****9997788899999*******************9998777665533322457778999999999999999******************** PP

  Glyco_transf_22 244 lkyNvlsnlsslyGvhPwyfYllqnlpnilgvlllavllgllvllsrkvsr.lllllltilltLlvysllpHKElRFllpvlPlillsaavllt 336
                      l +N+++ l  +yG+++w++Yl+++lp+il++ ++++l+ + ++l+   +   + l++t+++t+  +sl+ HKE RF++p+lPl+l++ a +++
       KHJ31790.1 299 LHFNLVQDLAVFYGSNSWHYYLTEGLPQILVTYFPFTLISVWKSLALPSNDiRFVLSITTIITIGSLSLISHKEVRFIYPLLPLFLILTAPAIS 392
                      ********************************************88888888899*************************************** PP

  Glyco_transf_22 337 rls.......................resakvskklsllvllllfnvvlalllglvhqagvillvevmseleetkrknrkekketssvy..... 402
                      ++                        +++++++k+  l++ +ll n+++a+++ lvhq+gvi   + m+ ++ t  + ++  k+ + ++     
       KHJ31790.1 393 HFFianvpvtkqaiktqtslktvshlHRHKLRHKP--LFISILLLNIIIAYYVTLVHQSGVI---AIMHYIRGTF-EITNLSKDSNFLLntnia 480
                      **99************9988887775555555555..9999*********************...7888777775.444444444444467777 PP

  Glyco_transf_22 403 ........vlkecyrtPsss 414
                              +l++c++tP  s
       KHJ31790.1 481 ndsipyvaFLMPCHSTPFRS 500
                      88888888*********876 PP

>> Ig_6  Immunoglobulin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   4.1e-05      0.37      20      40 ..     257     277 ..     250     281 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 4.1e-05
        Ig_6  20 ndsGsYiCrprneacCvkiiL 40 
                  + G+Y+C +r+++ C  + L
  KHJ31790.1 257 TSIGNYYCLIREGILCSAFLL 277
                 568*************98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (617 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 4448.52
//
Query:       KHJ31791.1  [L=310]
Description: hypothetical protein EV44_g4252 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.02   14.6   0.0      0.035   13.8   0.0    1.3  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.9e-06     0.035       4      58 ..     159     212 ..     156     227 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.9e-06
       RVT_2   4 rlvslPkdrkaigsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvi 58 
                 ++ + P + + +gsr+v  +k +d +    k+rlv+q +s +  ++   + +P i
  KHJ31791.1 159 NIKDVPLNARILGSRFVDDIKGKDTDRSYEKSRLVIQAHSDRGKKKLL-TQSPTI 212
                 56789**********************************998766554.455554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2245.68
//
Query:       KHJ31792.1  [L=150]
Description: hypothetical protein EV44_g3458 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       272  (0.015171); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 1162.07
//
Query:       KHJ31793.1  [L=107]
Description: hypothetical protein EV44_g3714 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       210  (0.0117129); expected 358.6 (0.02)
Passed bias filter:                      201  (0.0112109); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.22s 00:00:00.56 Elapsed: 00:00:00.36
# Mc/sec: 890.20
//
Query:       KHJ31794.1  [L=706]
Description: putative wd g-beta repeat containing protein chromatin assembly complex protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.1e-16   60.0   8.7    0.00054   20.7   0.0    6.5  7  WD40           WD domain, G-beta repeat
    1.1e-14   54.4   0.0    1.4e-05   25.3   0.0    5.0  5  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    4.2e-05   22.8   0.0      0.046   12.8   0.0    2.3  2  Coatomer_WDAD  Coatomer WD associated region
    0.00033   20.6   0.0      0.038   13.9   0.0    3.0  3  eIF2A          Eukaryotic translation initiation factor eIF2A
  ------ inclusion threshold ------
      0.029   14.3   4.3         23    5.1   0.1    4.7  4  PD40           WD40-like Beta Propeller Repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   0.00034       1.2      10      37 ..      11      42 ..       6      43 .. 0.81
   2 !   11.3   0.0   0.00014      0.49       6      33 ..      58      86 ..      54      90 .. 0.84
   3 !   20.7   0.0   1.5e-07   0.00054      12      38 .]     125     151 ..     116     151 .. 0.89
   4 !   11.1   0.0   0.00016      0.58       5      37 ..     159     192 ..     154     193 .. 0.79
   5 ?   -1.6   0.0       1.7   6.2e+03      15      27 ..     344     356 ..     339     362 .. 0.84
   6 ?    5.1   0.6     0.013        47      10      33 ..     524     548 ..     517     550 .. 0.80
   7 ?   -2.4   0.0       2.9     1e+04       5      16 ..     665     677 ..     663     683 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00034
                SSS...EEEEEEETTSSE.EEEEETTSEEEEE CS
        WD40 10 Hss...vtslafspdgaw.lasGsdDgtvriW 37
                Hs+   ++s  f+p+g+  +a+G+ D++vr+W
  KHJ31794.1 11 HSDtapIYSAEFQPHGRGrMATGGGDNNVRLW 42
                6334569999999999998899977******* PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00014
                EEESS.SSEEEEEEETTSSEEEEEETTSE CS
        WD40  6 tltGH.ssvtslafspdgawlasGsdDgt 33
                t + H + v+ +++ p g+ las+sdDg+
  KHJ31794.1 58 TMSKHtQAVNVVRWAPKGDILASASDDGN 86
                55679777*******************97 PP

  == domain 3  score: 20.7 bits;  conditional E-value: 1.5e-07
                 SEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvriWd 38 
                  +++la+spdg ++++Gs+D+  ri++
  KHJ31794.1 125 EIYDLAWSPDGVFFITGSMDNIARIYN 151
                 59***********************97 PP

  == domain 4  score: 11.1 bits;  conditional E-value: 0.00016
                 EEEESSSS.EEEEEEETTSSEEEE.EETTSEEEEE CS
        WD40   5 rtltGHss.vtslafspdgawlas.GsdDgtvriW 37 
                 r +  H++ + ++a++p + ++a+ +s D++v+i+
  KHJ31794.1 159 RQIAEHQHyIQGVAWDPLNEYIATqSS-DRSVHIY 192
                 455567556*************98446.*****97 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 1.7
                 EEEEETTSSEEEE CS
        WD40  15 slafspdgawlas 27 
                  l f pdg++l++
  KHJ31794.1 344 RLTFTPDGSLLLT 356
                 57899****9986 PP

  == domain 6  score: 5.1 bits;  conditional E-value: 0.013
                 S.SSEEEEEEETTSSEEE.EEETTSE CS
        WD40  10 H.ssvtslafspdgawla.sGsdDgt 33 
                 H  s t+la+s dg  l+ ++s Dg 
  KHJ31794.1 524 HcASFTDLAWSNDGLILLiTSS-DGF 548
                 5445699*********754888.986 PP

  == domain 7  score: -2.4 bits;  conditional E-value: 2.9
                 EEEESS.SSEEEE CS
        WD40   5 rtltGH.ssvtsl 16 
                 r+ +G  s++tsl
  KHJ31794.1 665 RVVSGTrSDITSL 677
                 567899899*999 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.1   5.8e-05      0.21      16      61 ..      36      86 ..      29      94 .. 0.74
   2 !   25.3   0.0   3.9e-09   1.4e-05      33      89 ..     118     173 ..     105     175 .. 0.87
   3 !    6.6   0.0    0.0026       9.3      36      73 ..     163     200 ..     160     210 .. 0.85
   4 ?   -1.9   0.0       1.2   4.4e+03      38      55 ..     339     356 ..     329     378 .. 0.79
   5 !    8.2   0.0   0.00085         3      35      66 ..     522     553 ..     493     566 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 5.8e-05
  ANAPC4_WD40 16 dgellvfRlng.......qrvwtl.eedkedsevrsLaWkpdgklLavaysdge 61
                 d+++++ R++        +    + + +k+ + v+ ++W p+g +La a +dg+
   KHJ31794.1 36 DNNVRLWRIDVegeetkvEY---IcTMSKHTQAVNVVRWAPKGDILASASDDGN 86
                 56666666666555532233...2455899**********************96 PP

  == domain 2  score: 25.3 bits;  conditional E-value: 3.9e-09
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                   ++  +se+ +LaW+pdg ++  +  d+  r+++ ++g++v+++  +++  ++ + W
   KHJ31794.1 118 VRNMGGSEIYDLAWSPDGVFFITGSMDNIARIYNTQTGHLVRQIAEHQH-YIQGVAW 173
                  4567899*************************************99999.5999998 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0026
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvv 73 
                  ++++ ++++aW p ++ +a   sd +v+++  ++++  
   KHJ31794.1 163 EHQHYIQGVAWDPLNEYIATQSSDRSVHIYTLKTQDGA 200
                  678899************************99887655 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 1.2
  ANAPC4_WD40  38 dsevrsLaWkpdgklLav 55 
                  +s  r L + pdg+lL  
   KHJ31794.1 339 KSYFRRLTFTPDGSLLLT 356
                  56678999*****99974 PP

  == domain 5  score: 8.2 bits;  conditional E-value: 0.00085
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlld 66 
                  + +  + ++LaW++dg +L +  sdg ++ l 
   KHJ31794.1 522 NLHCASFTDLAWSNDGLILLITSSDGFCSTLV 553
                  455567899*****************887665 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   1.3e-05     0.046     126     176 ..     145     198 ..     112     220 .. 0.78
   2 !    7.7   0.0   0.00045       1.6     118     167 ..     496     548 ..     464     566 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.3e-05
                    X.XXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXX.XXXXXXXXXXXXX. CS
  Coatomer_WDAD 126 gsvsfYDweqgklvrridvkk..vknVvwsddgelvalv.skdtvyilsynlea 176
                    ++  +Y+ ++g lvr+i  ++  ++ V w++ +e++a   s+++v+i++ + ++
     KHJ31794.1 145 NIARIYNTQTGHLVRQIAEHQhyIQGVAWDPLNEYIATQsSDRSVHIYTLKTQD 198
                    55679*************88668**************98356788888866663 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00045
                    XXXXXXXXX.XXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 118 alLgvksegsvsfYDweqgklvrrid...vkkvknVvwsddgelvalvskdtv 167
                    +++ v +e+ v +YD +q++ +  ++     + ++  ws+dg ++ ++s+d +
     KHJ31794.1 496 MIFAVATEDAVLLYDTQQQTPICVVSnlhCASFTDLAWSNDGLILLITSSDGF 548
                    6788999999*********96665543216689************99998765 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.035   1.3e+02      91     118 ..      52      81 ..      11      85 .. 0.66
   2 !   13.9   0.0   1.1e-05     0.038      61     116 ..     125     181 ..     110     191 .. 0.76
   3 ?   -0.6   0.0      0.29   1.1e+03     130     159 ..     509     541 ..     501     547 .. 0.52

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.035
                 SCEEEEEEEE..ES--EEEE-TTSSEEEEE CS
       eIF2A  91 kvkvisklee..qkrNtiffspkgklvlla 118
                 kv+ i+++++  q+ N + + pkg +++ a
  KHJ31794.1  52 KVEYICTMSKhtQAVNVVRWAPKGDILASA 81 
                 366666665411678999999999998776 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 1.1e-05
                 .EEEEEE-TTSS-EEEEESSSSCEEEEEECS.CEEEEEEEEES-..-EEEE-TTSSEEE CS
       eIF2A  61 pihdvaWspkskefaviyGkmpakvslfdlk.vkviskleeqkr..Ntiffspkgklvl 116
                 +i+d+aWsp++  f  i G m++ + +++++ ++++ ++ e+++    + ++p +++++
  KHJ31794.1 125 EIYDLAWSPDGVFF--ITGSMDNIARIYNTQtGHLVRQIAEHQHyiQGVAWDPLNEYIA 181
                 59999999998655..7899999999999976777777776654125688888888876 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.29
                 EETTTTE...EEEEEE-TT--EEEE-TTSSEEE CS
       eIF2A 130 wdvkkkk...kiakaeaanatlvewspdgryvl 159
                 +d+++ +    ++++++a  t++ ws+dg  +l
  KHJ31794.1 509 YDTQQQTpicVVSNLHCASFTDLAWSNDGLILL 541
                 444433211134555555556666666665443 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.08   2.9e+02      13      28 ..      78      93 ..      73      98 .. 0.81
   2 ?    4.1   0.1     0.013        48      10      20 ..     125     135 ..     120     140 .. 0.77
   3 ?    0.4   0.0      0.19   6.9e+02      15      23 ..     346     354 ..     343     355 .. 0.84
   4 ?    5.1   0.1    0.0064        23      15      28 ..     532     545 ..     527     549 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.08
                EEEE-TTSSEEEEEEE CS
        PD40 13 aPsfSPDGkrlaFsSd 28
                  s S DG+ ++++ d
  KHJ31794.1 78 LASASDDGNAITWVLD 93
                5688*********988 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.013
                 .EEEEEE-TTS CS
        PD40  10 negaPsfSPDG 20 
                 ++++ ++SPDG
  KHJ31794.1 125 EIYDLAWSPDG 135
                 567779***** PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.19
                 EE-TTSSEE CS
        PD40  15 sfSPDGkrl 23 
                 +f+PDG+ l
  KHJ31794.1 346 TFTPDGSLL 354
                 799***876 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.0064
                 EE-TTSSEEEEEEE CS
        PD40  15 sfSPDGkrlaFsSd 28 
                 ++S+DG  l ++S+
  KHJ31794.1 532 AWSNDGLILLITSS 545
                 8***********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (706 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.38
# Mc/sec: 5552.27
//
Query:       KHJ31795.1  [L=504]
Description: putative phosphatidylinositol:udp- c transferase pig-c protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   8.1e-129  429.0  11.0     1e-128  428.7  11.0    1.1  1  GPI2      Phosphatidylinositol N-acetylglucosaminyltransferas


Domain annotation for each model (and alignments):
>> GPI2  Phosphatidylinositol N-acetylglucosaminyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  428.7  11.0  5.6e-133    1e-128       1     280 []      74     490 ..      74     490 .. 0.98

  Alignments for each domain:
  == domain 1  score: 428.7 bits;  conditional E-value: 5.6e-133
        GPI2   1 WkKlLwvkqsypDnYtd.etFleeLqrnprvkpydfwplvadstvivqhvcsviifvlvFvgiyqervspvsvvllssiltvlgwllwelwaskee... 95 
                 WkKlLwvkqsypDnYtd etFl++Lqrnp ++pydfwplvadstvivqhvcsviifv++Fvgi+qe +sp +vv+++si+t lgw+lw+ w++ ++   
  KHJ31795.1  74 WKKLLWVKQSYPDNYTDqETFLDHLQRNPCLQPYDFWPLVADSTVIVQHVCSVIIFVVCFVGIFQEYFSPIAVVGWGSIATSLGWILWDSWMNGRKees 172
                 *******************************************************************************************9888789* PP

        GPI2  96 ................................................................................................... 95 
                                                                                                                    
  KHJ31795.1 173 dklgvakinkgshsspevdsdvssllnisgirtssltnntsttnllvhqkkllndsntmmansfsphqshshstsvssvtsitsaprasnapfalaadh 271
                 *************************************************************************************************** PP

        GPI2  96 ...srssraqqrlktiksalliyftllglSPiLksLTkstssDSIwalsfwlllinifffdysiekkkskekeek........lvaslStnaalmastv 183
                    + s r+++rl+t+ksa+liyftllglSPiLksLT+stssDSIw++sf+l+++nifffdy+++  +s+++ ++        ++aslStnaalmastv
  KHJ31795.1 272 spnQFSYRTSRRLSTAKSAILIYFTLLGLSPILKSLTRSTSSDSIWTMSFLLFTVNIFFFDYGTSVPSSSSTFSSsgvnrkknIPASLSTNAALMASTV 370
                 **999**********************************************************998888776666899********************* PP

        GPI2 184 LASRLpstlqVFslllfsievfglfPvfrrslrhrswrlhvvltvllvllagagvgiilk.......................lllavvlllllalimg 259
                 LASRLpst+qVFsl+lfsievfglfPvfr+ lr+rswr hv+lt+llvl+ag+gvg il+                        l++v++++l+al+mg
  KHJ31795.1 371 LASRLPSTGQVFSLTLFSIEVFGLFPVFRNDLRQRSWRGHVFLTTLLVLGAGGGVGLILSirkmlsnsavttahqfyfpyknfGLGMVLGVILTALAMG 469
                 **********************************************************************************99*************** PP

        GPI2 260 vcpwwliglqkykneiyGpWD 280
                  c+wwliglqkyknei+GpWD
  KHJ31795.1 470 SCSWWLIGLQKYKNEIHGPWD 490
                 ********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (504 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       862  (0.0480785); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.22s 00:00:00.76 Elapsed: 00:00:00.37
# Mc/sec: 4069.59
//
Query:       KHJ31796.1  [L=393]
Description: putative adp-ribosylation factor gtpase-activating protein gcs1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-31  107.2   0.2    9.9e-31  106.2   0.2    1.5  1  ArfGap    Putative GTPase activating protein for Arf


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.2   0.2   5.5e-35   9.9e-31       4      98 ..      17     114 ..      14     133 .. 0.85

  Alignments for each domain:
  == domain 1  score: 106.2 bits;  conditional E-value: 5.5e-35
                 HHHHCCSCCCCB-TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG...-TTCGHH CS
      ArfGap   4 lkellkepenkvCaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekr...skssske 98 
                 l e++k ++n++C+DC+a++p+Was ++g+f+C++C+g+Hr lgvhis+vrs+++d +++ e+e ++ +gNk  ++++e+  ++++     ++ s +e
  KHJ31796.1  17 LLEIQKTKSNDRCCDCEAPSPQWASPKFGIFICLSCAGIHRGLGVHISFVRSISMDAFKSVEIERMRLGGNKSWRDFFEQAESNKKVGitwDDASISE 114
                 6688999************************************************************************9997776655444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       565  (0.0315132); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 3354.38
//
Query:       KHJ31797.1  [L=405]
Description: putative rnp domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.5e-30  102.4   0.1    5.3e-14   51.8   0.0    3.3  2  RRM_1            RNA recognition motif. (a.k.a. RRM, RBD, or 
    0.00022   20.8   0.0       0.61    9.7   0.0    3.0  2  RRM_5            RNA recognition motif. (a.k.a. RRM, RBD, or 
      0.002   18.2   0.0       0.34   11.1   0.0    2.5  2  RRM_7            RNA recognition motif
  ------ inclusion threshold ------
      0.036   14.1   0.3        6.7    6.9   0.0    3.0  3  Limkain-b1       Limkain b1


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.8   0.0   1.2e-17   5.3e-14       1      69 [.      53     121 ..      53     122 .. 0.95
   2 !   42.9   0.1   6.9e-15   3.1e-11       1      69 [.     258     339 ..     258     340 .. 0.82

  Alignments for each domain:
  == domain 1  score: 51.8 bits;  conditional E-value: 1.2e-17
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 l++gnL++ +te eL  +F+++  i+s +++++ +t+++ g+afV+ +++ +Ae+A+++l g+++  r++
  KHJ31797.1  53 LYIGNLAYATTEGELQSFFKGYS-IESTSIPKNpRTDRPVGYAFVDLTTSAEAERAIAELSGQEILERKV 121
                 8*********************6.56**************************************999986 PP

  == domain 2  score: 42.9 bits;  conditional E-value: 6.9e-15
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEE.........EEE.....TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksikl.........vrd.....etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ++V nLp+d++ee+LkelF +++p+ s+k+         v++     e +k +gf+fV+ +s e  ++A++++ngk+++gre+
  KHJ31797.1 258 VMVANLPYDLSEEKLKELFADYEPV-SAKIalrpipkfmVKKlqarnEPRKGRGFGFVNLASNELQNRAVAEMNGKEVQGREI 339
                 689**********************.44432222222213337777788999*****************************98 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0   0.00014      0.61      65     103 ..      92     130 ..      88     143 .. 0.89
   2 !    6.5   0.0    0.0013       5.7      18      98 ..     247     343 ..     230     364 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00014
       RRM_5  65 etalvqmgdasaveravqHLnnaklfgkrlevalSKqqa 103
                 ++a+v++  + ++era+  L+++++ ++++ v+l ++ +
  KHJ31797.1  92 GYAFVDLTTSAEAERAIAELSGQEILERKVSVQLARKPE 130
                 79******************************9998765 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0013
       RRM_5  18 pgaagvaegsVllVyglepdkvnldklFnlfclYgnve.rv......kflktk..........ketalvqmgdasaveravqHLnnaklfgkrleval 98 
                 p a+gv++ + ++V +l  d +  +kl  lf+ Y+ v+ ++      kf+  k          ++  +v++++    +rav  +n++++ g+++ v++
  KHJ31797.1 247 PPANGVPSKTKVMVANLPYD-LSEEKLKELFADYEPVSaKIalrpipKFMVKKlqarneprkgRGFGFVNLASNELQNRAVAEMNGKEVQGREIAVKI 343
                 45778888888888888655.56678888888888774244444445566544222222222235578999999999999999999999999888765 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.6   0.0    0.0076        34       2      40 ..      51      89 ..      50     125 .. 0.87
   2 !   11.1   0.0   7.5e-05      0.34       2      35 ..     256     289 ..     255     335 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0076
       RRM_7  2 rkvFvGGlPiDiteeelkatfkefgkvlvdwPkkaeskk 40
                r++++G l    te el++ fk ++  +   Pk++++++
  KHJ31797.1 51 RRLYIGNLAYATTEGELQSFFKGYSIESTSIPKNPRTDR 89
                7899*********************99999999988754 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 7.5e-05
       RRM_7   2 rkvFvGGlPiDiteeelkatfkefgkvlvdwPkk 35 
                  kv v  lP D++ee+lk+ f  + +v+     +
  KHJ31797.1 256 TKVMVANLPYDLSEEKLKELFADYEPVSAKIALR 289
                 69**********************9998765444 PP

>> Limkain-b1  Limkain b1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.014        62      44      84 ..      94     134 ..      91     138 .. 0.83
   2 ?   -2.2   0.0      0.97   4.4e+03       2      13 ..     255     266 ..     254     274 .. 0.73
   3 ?    6.9   0.0    0.0015       6.7      46      76 ..     314     344 ..     309     354 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.014
  Limkain-b1  44 avlrfanqeaaeralkrleneDvfGnritvsekprnkevne 84 
                 a +  +    aera+  l + ++   +++v+   ++++ ++
  KHJ31797.1  94 AFVDLTTSAEAERAIAELSGQEILERKVSVQLARKPEQPAD 134
                 6677778889********************98877776665 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.97
  Limkain-b1   2 esllvvsnLPtn 13 
                 ++ ++v nLP +
  KHJ31797.1 255 KTKVMVANLPYD 266
                 67799*****75 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0015
  Limkain-b1  46 lrfanqeaaeralkrleneDvfGnritvsek 76 
                 ++ a++e  +ra+  +++ +v G  i+v+  
  KHJ31797.1 314 VNLASNELQNRAVAEMNGKEVQGREIAVKIA 344
                 678999********************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       826  (0.0460706); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.21s 00:00:00.71 Elapsed: 00:00:00.35
# Mc/sec: 3422.26
//
Query:       KHJ31798.1  [L=323]
Description: putative syntaxin 5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.8e-13   47.9   0.4    2.1e-12   46.9   0.4    1.6  1  SNARE            SNARE domain
    6.7e-09   34.7   1.0      2e-08   33.3   1.0    1.8  1  Syntaxin-5_N     Syntaxin-5 N-terminal, Sly1p-binding domain
    0.00097   18.9   8.1     0.0012   18.6   0.2    3.2  3  Syntaxin         Syntaxin
     0.0013   19.0   4.0       0.41   11.0   0.1    3.2  4  KxDL             Uncharacterized conserved protein
  ------ inclusion threshold ------
       0.01   16.1   1.1      0.059   13.6   0.1    2.6  2  Syntaxin-18_N    SNARE-complex protein Syntaxin-18 N-terminus
      0.027   14.3   9.5       0.41   10.4   1.0    2.9  3  MCPsignal        Methyl-accepting chemotaxis protein (MCP) si
       0.03   12.3   4.4       0.36    8.7   0.1    2.2  2  Prominin         Prominin
      0.064   13.5   2.8        1.3    9.3   0.0    3.6  4  DUF948           Bacterial protein of unknown function (DUF94
       0.16   12.0   4.0         40    4.2   0.1    3.3  3  Baculo_PEP_C     Baculovirus polyhedron envelope protein, PEP
       0.17   12.5   2.2        1.2    9.9   2.2    2.4  1  FecR             FecR protein
       0.23   10.8   4.9       0.38   10.1   0.7    2.5  2  SF-assemblin     SF-assemblin/beta giardin
       0.28   10.8   3.9          3    7.5   0.2    3.2  3  DUF4988          Domain of unknown function
       0.39   11.2   9.4        3.2    8.3   0.1    4.0  4  NPV_P10          Nucleopolyhedrovirus P10 protein
       0.44    9.6   3.7       0.25   10.5   0.2    2.0  2  AI-2E_transport  AI-2E family transporter
       0.44   10.9   3.6        8.5    6.8   0.0    3.3  3  BLOC1_2          Biogenesis of lysosome-related organelles co
        2.7    8.2   6.6        1.3    9.1   0.4    3.4  4  TRPM_tetra       Tetramerisation domain of TRPM
        6.7    6.8   6.9        3.8    7.6   0.2    3.3  4  DUF1664          Protein of unknown function (DUF1664)


Domain annotation for each model (and alignments):
>> SNARE  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.9   0.4   1.9e-15   2.1e-12       1      53 []     267     319 ..     267     319 .. 0.99

  Alignments for each domain:
  == domain 1  score: 46.9 bits;  conditional E-value: 1.9e-15
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXXXXXXXXXXXXXXXXXXXX CS
       SNARE   1 emvDrIdtnVenaqsnveraqkeLkkavkyqksnRklkciillilviillvvl 53 
                 em++rId+n e++++nv++aq+eL k+  + + nR+l  +   +l i++l+++
  KHJ31798.1 267 EMIQRIDANTEDVVDNVQGAQRELLKYWSRVSGNRWLVAKMMSVLMIFFLIWV 319
                 8**************************************************97 PP

>> Syntaxin-5_N  Syntaxin-5 N-terminal, Sly1p-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   1.0   1.9e-11     2e-08       5      23 .]       5      23 ..       2      23 .. 0.96

  Alignments for each domain:
  == domain 1  score: 33.3 bits;  conditional E-value: 1.9e-11
  Syntaxin-5_N  5 SirDRTsEFqSivkslQkR 23
                  Si+DRT+EF S++ ++QkR
    KHJ31798.1  5 SIQDRTNEFKSVLSQVQKR 23
                  9*****************9 PP

>> Syntaxin  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.2      0.33   3.5e+02       4      72 ..      16      85 ..       2      95 .. 0.56
   2 ?    3.2   0.6     0.057        61      44     114 ..      88     162 ..      58     176 .. 0.68
   3 !   18.6   0.2   1.1e-06    0.0012     165     199 ..     231     265 ..     218     266 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.33
    Syntaxin  4 ffkeveeikkeiekleeevkklkkqneesktstraksvk.lkkrmesdikeikkraesvkarLeaLdksn 72
                ++++v++ +   +   ++   l+++++   ++ ++ + k  ++++ + ++ei +       +Le+L + +
  KHJ31798.1 16 VLSQVQKRQATSKLGGQKQPLLSDSQKAAANANSSGDGKfRRSEFARRAAEIGRGIAVTMGKLEKLAQLA 85
                4444444333333333444445555555555566666665666666666666666666666666666555 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.057
    Syntaxin  44 kkrmesdikeikkraesvkarLeaLdksnkenekks....gegsavdRirksqtaaLrkklkevmteynelreki 114
                 k  ++    ei++    +k+ L +L++++   ++ s     ++  +   +k ++  L+ kl +v  +++++ e  
  KHJ31798.1  88 KTLFDDRPVEINELTSIIKQDLSSLNQQISFLQTLSrsqhPKTDQEGEHNKNVVFLLQGKLTDVSANFKDVLEVR 162
                 444556667778888888888888888877665555322233444445667777778888888888887766554 PP

  == domain 3  score: 18.6 bits;  conditional E-value: 1.1e-06
    Syntaxin 165 lseieeRhkevlelekslkeLhqlFldmavLVEeQ 199
                  + i++R +++  +e+ + eL  +F ++a +V eQ
  KHJ31798.1 231 NTYIQQRGEAIEAIERTISELGGIFSQLASMVSEQ 265
                 5679******************************9 PP

>> KxDL  Uncharacterized conserved protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       8.4   8.9e+03      71      79 ..      10      18 ..       3      27 .. 0.44
   2 !   11.0   0.1   0.00039      0.41      46      84 ..      91     129 ..      65     130 .. 0.79
   3 ?   -2.4   0.0       5.6   5.9e+03      40      54 ..     145     159 ..     139     179 .. 0.65
   4 !    7.9   0.0    0.0034       3.6      10      62 ..     257     309 ..     255     315 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 8.4
        KxDL 71 irslkakla 79
                ++ +k+ l+
  KHJ31798.1 10 TNEFKSVLS 18
                333333222 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00039
        KxDL  46 lrarfkqgtkllkevkkdLesifkkirslkaklakkyPe 84 
                 + +r  +  +l + +k+dL s++++i+ l++  ++++P+
  KHJ31798.1  91 FDDRPVEINELTSIIKQDLSSLNQQISFLQTLSRSQHPK 129
                 555555566788899***********************8 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 5.6
        KxDL  40 qerlaklrarfkqgt 54 
                 q +l++++a+fk+  
  KHJ31798.1 145 QGKLTDVSANFKDVL 159
                 555666666666543 PP

  == domain 4  score: 7.9 bits;  conditional E-value: 0.0034
        KxDL  10 dldeilalQaqtsgrlnkknreLlelnalsqerlaklrarfkqgtkllkevkk 62 
                 +l ++++ Q+++ +r+ + ++ + +  + +q++l k+ +r+  +  l+ ++ +
  KHJ31798.1 257 QLASMVSEQNEMIQRIDANTEDVVDNVQGAQRELLKYWSRVSGNRWLVAKMMS 309
                 7899*****************************99999888887777666655 PP

>> Syntaxin-18_N  SNARE-complex protein Syntaxin-18 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   5.5e-05     0.059       2      52 ..       8      68 ..       7      73 .. 0.75
   2 ?   -0.1   0.1       1.1   1.1e+03       1      28 [.     149     170 ..     149     195 .. 0.61

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 5.5e-05
  Syntaxin-18_N  2 DiTplFkasVktvk..........asssskseekeakkrkkkrlkkskekdeFikeAkeil 52
                   D+T++Fk+++++v+          +++   s +++a+ + +++   +  ++eF ++A ei 
     KHJ31798.1  8 DRTNEFKSVLSQVQkrqatsklggQKQPLLSDSQKAAANANSSGDGKFRRSEFARRAAEIG 68
                   9************98888776653255566666666666777777777777****999985 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.1
  Syntaxin-18_N   1 mDiTplFkasVktvkasssskseekeak 28 
                    +D++  Fk+++++        ++ + ++
     KHJ31798.1 149 TDVSANFKDVLEVRT------KNIQASR 170
                    588888888888772......2222222 PP

>> MCPsignal  Methyl-accepting chemotaxis protein (MCP) signalling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       2.4   2.5e+03      85     102 ..       7      24 ..       2      34 .. 0.60
   2 ?    8.7   0.3    0.0013       1.4      60     110 ..      61     117 ..      59     186 .. 0.61
   3 ?   10.4   1.0   0.00039      0.41     114     168 ..     225     279 ..     218     283 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.4
                 HHHHHHHHHHH....... CS
   MCPsignal  85 aqaakeiealiieiqkei 102
                 +++++e ++++ ++qk  
  KHJ31798.1   7 QDRTNEFKSVLSQVQKRQ 24 
                 455566666665555544 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0013
                 HHHTCCCCHHHHHHHHHHHHHHHHHH......HHHHHHHHHH..............H CS
   MCPsignal  60 AARAGeqGrGFaVVAdEVrkLAersa......qaakeiealiieiqkeindsvesle 110
                 A RA e GrG aV  +   kLA+ ++      ++  ei++l   i+++  +  + ++
  KHJ31798.1  61 ARRAAEIGRGIAVTMGKLEKLAQLAKrktlfdDRPVEINELTSIIKQDLSSLNQQIS 117
                 679**************9999987661112224456788777666666554444443 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 0.00039
                 HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   MCPsignal 114 qrveegselveetgealkeiveavaevadlvqeiaaaseeqsasieevnqaveev 168
                 ++++ + + +++ gea++ i  +++e+  + +++a+ ++eq + i+ +  + e v
  KHJ31798.1 225 EEAQPTNTYIQQRGEAIEAIERTISELGGIFSQLASMVSEQNEMIQRIDANTEDV 279
                 567788999***************************************9998876 PP

>> Prominin  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   1.2    0.0058       6.1     322     406 ..      96     178 ..      72     195 .. 0.75
   2 ?    8.7   0.1   0.00034      0.36     356     434 ..     243     320 ..     220     323 .] 0.65

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0058
    Prominin 322 evlealeevletnlssivkeglarlneipekvknqtaevvpdlkkalakgreqikklakkiprealdavisdlenterssktfdd 406
                  ++++l+++++++lss+  ++++ l+++++  + +t++  +  k+ +   + ++ +++ ++ +++l+  +++++ +  ++++f  
  KHJ31798.1  96 VEINELTSIIKQDLSSLN-QQISFLQTLSRSQHPKTDQEGEHNKNVVFLLQGKLTDVSANF-KDVLEVRTKNIQASRARTENFVS 178
                 567888888888888775.667888888888888888888888888888888888888888.88888888888866666666554 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00034
    Prominin 356 qtaevvpdlkkalakgreqikklakkiprealdavisdle.nterssktfddvvekyekyrwliglivcsllllivvili 434
                  +++++++l    ++  ++++++ ++i + ++da ++d+  n++   ++ ++++ +++ +rwl+  ++++l+++ ++ ++
  KHJ31798.1 243 AIERTISELGGIFSQLASMVSEQNEMI-Q-RIDANTEDVVdNVQGAQRELLKYWSRVSGNRWLVAKMMSVLMIFFLIWVL 320
                 333344444444444555555555555.3.34444455544899999999999**********99999888776666554 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.29   3.1e+02      32      59 ..      23      50 ..       2      87 .. 0.78
   2 ?   -0.0   0.0         1   1.1e+03      55      81 ..      97     123 ..      58     127 .. 0.55
   3 ?   -2.3   0.1       5.2   5.5e+03      37      37 ..     161     161 ..     137     191 .. 0.54
   4 ?    9.3   0.0    0.0013       1.3      32      74 ..     241     283 ..     229     294 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.29
      DUF948 32 aatieelekqvdpilkevedllakvnel 59
                +++  +l+ q +p+l +++++ a++n  
  KHJ31798.1 23 RQATSKLGGQKQPLLSDSQKAAANANSS 50
                4556677788899999999999999874 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 1
      DUF948  55 kvnelledvneklekvdplteavadlg 81 
                 ++nel++ +++ l ++++ ++ +++l+
  KHJ31798.1  97 EINELTSIIKQDLSSLNQQISFLQTLS 123
                 334455555556666665555555555 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 5.2
      DUF948  37 e 37 
                 +
  KHJ31798.1 161 V 161
                 2 PP

  == domain 4  score: 9.3 bits;  conditional E-value: 0.0013
      DUF948  32 aatieelekqvdpilkevedllakvnelledvneklekvdplt 74 
                  ++ie + +++++i  +++ ++++ ne+ + +   +e+v   +
  KHJ31798.1 241 IEAIERTISELGGIFSQLASMVSEQNEMIQRIDANTEDVVDNV 283
                 4556666677888888888888888888887777776654433 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.1     0.053        56      73      98 ..      95     120 ..      63     123 .. 0.77
   2 ?    3.4   0.1     0.069        72      43      93 ..     144     194 ..     138     197 .. 0.85
   3 ?    4.2   0.1     0.038        40      39      80 ..     240     284 ..     220     297 .. 0.49

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.053
  Baculo_PEP_C  73 tdalnalqdtlrneLtnlnsiltnLl 98 
                      +n+l+  ++++L +ln++++ L+
    KHJ31798.1  95 PVEINELTSIIKQDLSSLNQQISFLQ 120
                   45799999999999999999998775 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.069
  Baculo_PEP_C  43 ietqLnalsedlksllaeldtrldtlltnLtdalnalqdtlrneLtnlnsi 93 
                   ++++L+++s+++k++l+  +++++++ ++ ++ + +++  +++ +t  ns 
    KHJ31798.1 144 LQGKLTDVSANFKDVLEVRTKNIQASRARTENFVSSVSAHVTSPITQSNSP 194
                   789999999999999998888999999999999999999999999988876 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.038
  Baculo_PEP_C  39 lldaietqLnals...edlksllaeldtrldtlltnLtdalnalq 80 
                   +++aie+++++l    ++l s+++e++++++   +n +d + ++q
    KHJ31798.1 240 AIEAIERTISELGgifSQLASMVSEQNEMIQRIDANTEDVVDNVQ 284
                   444444444443300033333333333334443333333333333 PP

>> FecR  FecR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   2.2    0.0011       1.2      28      79 ..     126     177 ..      23     189 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0011
        FecR  28 sl.ekaadsskrrrevsllkGevlfdvakdkkrpfevktpsatigvrgtefrv 79 
                 +  +++++ +++++ v ll+G+ l+dv+++ k+ +ev+t++ +++ + te  v
  KHJ31798.1 126 QHpKTDQEGEHNKNVVFLLQGK-LTDVSANFKDVLEVRTKNIQASRARTENFV 177
                 336677778888899*******.78999999999**********999986534 PP

>> SF-assemblin  SF-assemblin/beta giardin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.7   0.00036      0.38      79     165 ..      94     183 ..      81     193 .. 0.81
   2 ?    1.7   0.2      0.13   1.3e+02      87     131 ..     241     284 ..     223     292 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00036
  SF-assemblin  79 ikeevddlalelkkaveelnekinnveanvenekakrrdaieklakelv...kelneleaaideEkaerkkkedqlnkkveEdlkklsak 165
                      e+++l+  +k+ + +ln++i  ++++ + ++ k  ++ e+ ++ +    ++l ++ a++++    r k+ + +  + e+ +  +sa+
    KHJ31798.1  94 RPVEINELTSIIKQDLSSLNQQISFLQTLSRSQHPKTDQEGEHNKNVVFllqGKLTDVSANFKDVLEVRTKNIQASRARTENFVSSVSAH 183
                   556789999999************************999999988864333489999999999988888888888887777777777766 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.13
  SF-assemblin  87 alelkkaveelnekinnveanvenekakrrdaieklakelvkeln 131
                     ++++++ el+    ++ + v ++ +  ++ i++  +++v ++ 
    KHJ31798.1 241 IEAIERTISELGGIFSQLASMVSEQNE-MIQRIDANTEDVVDNVQ 284
                   456777777777777777777765544.46667777766666654 PP

>> DUF4988  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.2      0.15   1.6e+02      13      37 ..     103     127 ..      93     158 .. 0.70
   2 ?    0.5   0.0      0.39   4.1e+02     129     160 ..     153     182 ..     147     190 .. 0.85
   3 ?    7.5   0.2    0.0029         3      10      48 ..     239     278 ..     232     290 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.15
     DUF4988  13 aaleeqvkelndniealkklleegk 37 
                 + +++ +++ln++i+ l++l ++++
  KHJ31798.1 103 SIIKQDLSSLNQQISFLQTLSRSQH 127
                 567899999******9999995544 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.39
     DUF4988 129 keyekildekGepvkAvgdkssedsffksvev 160
                  +++++l+ ++++++A+   +  ++f +sv +
  KHJ31798.1 153 ANFKDVLEVRTKNIQASRART--ENFVSSVSA 182
                 68999************9999..888888876 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.0029
     DUF4988  10 drvaaleeqvkelndniealkkll.eegkviteveensdg 48 
                 + ++a+e++++el   +++l+ ++ e++++i  ++ n++ 
  KHJ31798.1 239 EAIEAIERTISELGGIFSQLASMVsEQNEMIQRIDANTED 278
                 5699*******************9999********99886 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.2       1.7   1.7e+03      20      49 ..       3      34 ..       2      42 .. 0.62
   2 ?    3.0   0.0      0.14   1.5e+02       8      25 ..     104     121 ..      99     131 .. 0.86
   3 ?    8.3   0.1     0.003       3.2      20      50 ..     141     172 ..     135     192 .. 0.76
   4 ?    3.1   0.1      0.12   1.3e+02      11      51 ..     239     279 ..     231     291 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.7
     NPV_P10 20 Vdalqqqvddvqenlpdvt..elnekLdaqsa 49
                V+++q++ ++ ++ l +v+  + ++kL +q +
  KHJ31798.1  3 VSSIQDRTNEFKSVLSQVQkrQATSKLGGQKQ 34
                66677777666666666652235667777766 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.14
     NPV_P10   8 vIradikavddkVdalqq 25 
                  I++d + ++++++ lq+
  KHJ31798.1 104 IIKQDLSSLNQQISFLQT 121
                 58999********99997 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.003
     NPV_P10  20 Vdalqqqvddvqenlpdvtelnek.Ldaqsaq 50 
                 V  lq +++dv++n++dv e+ +k ++a  a 
  KHJ31798.1 141 VFLLQGKLTDVSANFKDVLEVRTKnIQASRAR 172
                 5679**************99987635555554 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.12
     NPV_P10  11 adikavddkVdalqqqvddvqenlpdvtelnekLdaqsaqL 51 
                 ++i+a++  ++ l     ++++ + + +e+ +++da ++ +
  KHJ31798.1 239 EAIEAIERTISELGGIFSQLASMVSEQNEMIQRIDANTEDV 279
                 57888888888888888888888888888888888887755 PP

>> AI-2E_transport  AI-2E family transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.4      0.56   5.9e+02     109     142 ..     139     186 ..      96     191 .. 0.44
   2 ?   10.5   0.2   0.00023      0.25      76     158 ..     234     316 ..     230     321 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.56
  AI-2E_transport 109 n..............liqalkqslskilsnilssilnsllsllasllg 142
                      n              + +++   ++k+++  +  + n+++s+ a++++
       KHJ31798.1 139 NvvfllqgkltdvsaNFKDVLEVRTKNIQASRARTENFVSSVSAHVTS 186
                      123333333333444444455555555555566666666666666655 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00023
  AI-2E_transport  76 iaqltqlvkslpayidslqnilnelpslleelenliqalkqslskilsnilssilnsllsllasllglilslvlvllllffll 158
                      i+q  + ++ +++ i++l  i+++l s++ e +++iq ++ +++++  n+++   + l +  + +++  l + ++ +l++f+l
       KHJ31798.1 234 IQQRGEAIEAIERTISELGGIFSQLASMVSEQNEMIQRIDANTEDVVDNVQGAQRELLKYWSRVSGNRWLVAKMMSVLMIFFL 316
                      7889999*************************747999999999999999988888888888888888777777777777776 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       3.3   3.5e+03      52      69 ..       5      22 ..       2      28 .. 0.57
   2 ?    3.4   0.1      0.09        95       4      38 ..      98     132 ..      96     181 .. 0.84
   3 ?    6.8   0.0     0.008       8.5      51      91 ..     225     265 ..     219     270 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 3.3
     BLOC1_2 52 klnekyeelqpylqqidq 69
                 ++ + +e+++ l+q+++
  KHJ31798.1  5 SIQDRTNEFKSVLSQVQK 22
                445555666666666554 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.09
     BLOC1_2   4 fekvskyleaeleatvedyklLeklNeaasekykk 38 
                 +++++++++++l++ ++++++L++l ++++ k ++
  KHJ31798.1  98 INELTSIIKQDLSSLNQQISFLQTLSRSQHPKTDQ 132
                 57789999999999999999999999988877665 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.008
     BLOC1_2  51 eklnekyeelqpylqqidqiekqvteLeeavseLDeyskeL 91 
                 e+ + ++  +q+  + i++ie++++eL  + s+L ++++e+
  KHJ31798.1 225 EEAQPTNTYIQQRGEAIEAIERTISELGGIFSQLASMVSEQ 265
                 44455555667777788888888888888888888887776 PP

>> TRPM_tetra  Tetramerisation domain of TRPM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       5.6   5.9e+03      18      36 ..       3      21 ..       1      25 [. 0.64
   2 ?   -1.4   0.0       2.5   2.6e+03      39      49 ..      75      85 ..      72      88 .. 0.81
   3 ?    9.1   0.4    0.0013       1.3      20      47 ..      97     124 ..      95     127 .. 0.94
   4 ?   -0.4   0.0       1.2   1.3e+03      40      55 ..     146     161 ..     145     161 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 5.6
  TRPM_tetra 18 veevneKenlikaSLqsld 36
                v  ++++ n  k+ L+++ 
  KHJ31798.1  3 VSSIQDRTNEFKSVLSQVQ 21
                5567777777777776665 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.5
  TRPM_tetra 39 LgkLedlsalt 49
                +gkLe l++l+
  KHJ31798.1 75 MGKLEKLAQLA 85
                89999999875 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.0013
  TRPM_tetra  20 evneKenlikaSLqsldfrLgkLedlsa 47 
                 e+ne  ++ik+ L+sl ++++ L+ ls 
  KHJ31798.1  97 EINELTSIIKQDLSSLNQQISFLQTLSR 124
                 89**********************9985 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 1.2
  TRPM_tetra  40 gkLedlsaltvdtLkv 55 
                 gkL d+sa   d L+v
  KHJ31798.1 146 GKLTDVSANFKDVLEV 161
                 79*******9999986 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       4.4   4.7e+03      91     108 ..       5      22 ..       2      33 .. 0.47
   2 ?    1.2   0.1      0.33   3.4e+02      72     113 ..      92     119 ..      67     152 .. 0.68
   3 ?    0.0   0.4      0.79   8.3e+02      74      74 ..     125     125 ..      97     186 .. 0.54
   4 ?    7.6   0.2    0.0036       3.8      80     122 ..     232     274 ..     217     299 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 4.4
     DUF1664  91 evredlseigedvesvke 108
                 ++++ ++e+++ +++v++
  KHJ31798.1   5 SIQDRTNEFKSVLSQVQK 22 
                 333333333333333332 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.33
     DUF1664  72 dkkldeqkeiskeikeevtevredlseigedvesvkeavegl 113
                 d++                e++e +s i++d++s+++ ++ l
  KHJ31798.1  92 DDRP--------------VEINELTSIIKQDLSSLNQQISFL 119
                 3333..............444445555555555555555444 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.79
     DUF1664  74 k 74 
                 +
  KHJ31798.1 125 S 125
                 1 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.0036
     DUF1664  80 eiskeikeevtevredlseigedvesvkeavegleskleriee 122
                   +++  e ++++++ +se+g  ++++ ++v++ ++ ++ri++
  KHJ31798.1 232 TYIQQRGEAIEAIERTISELGGIFSQLASMVSEQNEMIQRIDA 274
                 4455666677777777777777777777777777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1292  (0.072062); expected 358.6 (0.02)
Passed bias filter:                      683  (0.0380947); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.37
# Mc/sec: 2614.89
//
Query:       KHJ31799.1  [L=1187]
Description: hypothetical protein EV44_g5874 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       762  (0.042501); expected 358.6 (0.02)
Passed bias filter:                      243  (0.0135535); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.24s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 8297.35
//
Query:       KHJ31800.1  [L=272]
Description: putative glycoside hydrolase family 18 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-51  176.1   4.7    1.7e-51  175.8   4.7    1.0  1  Glyco_hydro_18  Glycosyl hydrolases family 18


Domain annotation for each model (and alignments):
>> Glyco_hydro_18  Glycosyl hydrolases family 18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.8   4.7   9.5e-56   1.7e-51       3     197 ..      52     261 ..      50     270 .. 0.91

  Alignments for each domain:
  == domain 1  score: 175.8 bits;  conditional E-value: 9.5e-56
                     EEEEEGGGGGSSGC....SHTTTESEEEEEEEEEEETTTEEEESS.TTHH.................HHHHHHHHHHHHTSTT-EEEEEEEETTT CS
                     xxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxx.................xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18   3 vgYysswesygnny....lpsaklthiiyaFakidgengkvvvsd.wedl.................gnfeqlkklkkkknpgvkvllsiGGwtd 75 
                     ++Y+ +w  y+++y    +p++++thi+yaF ++ + ng+v +sd ++d+                 g ++ql  lk k+n+++k+l+ +GGwt+
      KHJ31800.1  52 FVYFANWDIYKRSYnpqeIPASEVTHILYAFWNLAS-NGSVYNSDtYADItkqfatdkpngysnnlfGSLKQLYILK-KHNRHLKTLMTVGGWTY 144
                     79********8876557888**************99.***************************8888888888888.***************** PP

                     TTHHHHHHTSHHHHHHHHHHHHHHHHHCT-SEEEEEES-TTTSTCHHHHHHHHHHHHHHHHHHHHH..HTSTTCEEEEEEESSHHHHHHHCHHHH CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18  76 ssgfslaastdasrkkfadsvvsllrkygfDGiDidweypggnpedkenytallkelrealdkaka..tegkkllLsaavpasasdlskgydlpk 168
                     s++f+ a+s+d+sr+kfa+ vvs++r++gfDG+Didweyp + ++++ n+++ll+elr +ldk+++  + g ++lL++a +a++++++k  +l+k
      KHJ31800.1 145 STNFAAAVSSDTSRAKFASDVVSFVRDLGFDGVDIDWEYPAD-DTQAGNFVLLLAELRRQLDKYAEtnAPGYHFLLTVACSAGPVNYKKL-HLAK 237
                     ****************************************77.555****************66665788999*************9888.**** PP

                     HHHHTSEEEEETTTSSSTTSSBE--SS-S CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18 169 iakylDyvnvmtYDfhgswdnvtghhapl 197
                     +++y+D  n+m+YD++g+wdn     ++l
      KHJ31800.1 238 MNEYIDNWNLMAYDYSGAWDN-----SAL 261
                     *********************.....322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       350  (0.0195214); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2036.79
//
Query:       KHJ31801.1  [L=1121]
Description: putative phosphoinositide-specific phospholipase c [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      5e-61  204.5   0.0    9.6e-61  203.6   0.0    1.5  1  PI-PLC-X      Phosphatidylinositol-specific phospholipase C, 
    6.5e-43  145.7   0.0    6.5e-43  145.7   0.0    2.4  3  PI-PLC-Y      Phosphatidylinositol-specific phospholipase C, 
    3.9e-05   23.9   0.0       0.05   13.9   0.0    2.7  2  C2            C2 domain
    0.00089   19.7   0.1     0.0021   18.5   0.1    1.7  1  EF-hand_like  Phosphoinositide-specific phospholipase C, efha
     0.0016   18.2   0.1     0.0035   17.2   0.1    1.6  1  EF-hand_10    EF hand
     0.0028   18.0   0.8      0.026   14.9   0.9    2.7  2  EF-hand_7     EF-hand domain pair
  ------ inclusion threshold ------
      0.042   13.6   0.0       0.14   11.9   0.0    1.8  1  GDPD          Glycerophosphoryl diester phosphodiesterase fam
      0.065   13.8   0.0       0.31   11.6   0.0    2.2  1  PH_12         Pleckstrin homology domain
       0.11   12.5   0.2       0.83    9.8   0.0    2.6  3  EF-hand_6     EF-hand domain


Domain annotation for each model (and alignments):
>> PI-PLC-X  Phosphatidylinositol-specific phospholipase C, X domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.6   0.0   4.8e-64   9.6e-61       2     144 ..     543     683 ..     542     684 .. 0.98

  Alignments for each domain:
  == domain 1  score: 203.6 bits;  conditional E-value: 4.8e-64
                 EEEEETTTTTTS-SHHHHHTHHHH---SS-HHHHHHTT--EEEEEE-...TT.SEEEETTEEE.EEEHHHHHHHHHHHHHHSTT--EEEEEEETTT-TH CS
    PI-PLC-X   2 saPlshyfissshntyltgnqlssessveayrnaLlrGcRcvEidvwdgedeepvvlhgytltkkikfrdvleaikdyafktselPvivsLevhcsaeq 100
                 ++Pl++yfissshntyl g+q+ ++ssveay++aL+rGcRcvE+d+w+g+d+ pvv+hg+tlt++++f dv+++i++yaf++s++P+i+sLevhc+  q
  KHJ31801.1 543 DRPLNEYFISSSHNTYLLGRQVAGQSSVEAYISALNRGCRCVEVDCWNGSDG-PVVMHGRTLTSQVSFADVISTINKYAFVKSSYPLIISLEVHCNSLQ 640
                 78**************************************************.********************************************** PP

                 HHHHHHHHHHHGGGGB-EEETT-.------BCCCCTT-EEEEE. CS
    PI-PLC-X 101 qekmaeilkeifgdlLleeplekeeskelpspeelkgKilikvk 144
                 q++m+ei+ ++fg +L++ pl++ +s++lpsp +lk+++lik+k
  KHJ31801.1 641 QAMMVEIMIKAFGAKLITMPLDS-SSERLPSPSQLKNRVLIKAK 683
                 **********************6.9*****************99 PP

>> PI-PLC-Y  Phosphatidylinositol-specific phospholipase C, Y domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0         2     4e+03       7      42 ..     245     280 ..     243     289 .. 0.72
   2 ?   -3.9   0.2       8.9   1.8e+04      18      43 ..     358     382 ..     352     390 .. 0.64
   3 !  145.7   0.0   3.3e-46   6.5e-43       2     114 ..     787     901 ..     786     902 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2
    PI-PLC-Y   7 ytqsvkfksfekpeakkpnhvfslsesklkkll.eke 42 
                  +q+++++++++ ++kk++ ++ + e++++k+  +k+
  KHJ31801.1 245 LLQGTRLRKVSR-KKKKFKTLTFFLENEAAKVSwDKN 280
                 567888888885.457899999999999999873443 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 8.9
    PI-PLC-Y  18 kpeakkpnhvfslsesklkkllekee 43 
                 k++++ +  ++s+++++++++  ++e
  KHJ31801.1 358 KHRQELMASLSSFHKKAVEQYW-RAE 382
                 4555667788899999888887.333 PP

  == domain 3  score: 145.7 bits;  conditional E-value: 3.3e-46
    PI-PLC-Y   2 sdlvvytqsvkfksfekpeakkpnhvfslsesklkkllekeeekk.lvkhnrrhlmRvyPkgtrvdssNlnpvefWnvGvqmvAlnwqtldegmqlnea 99 
                  +l+vy +s++f++++ pe++++nhvfs+ses+l++  +++e+k+ +++hn+rhlmRvyP+g rv s+N++p+++W++GvqmvAlnwqt+d gmq+nea
  KHJ31801.1 787 GELAVYSKSIRFRGYDAPESRSYNHVFSFSESTLDRNSKTQEDKHaILRHNMRHLMRVYPNGWRVASTNFDPLRYWRRGVQMVALNWQTYDLGMQINEA 885
                 689*********************************9844444456***************************************************** PP

    PI-PLC-Y 100 lFa.engscGYvlKPe 114
                 +Fa  ++ +GYvlKP+
  KHJ31801.1 886 MFAsGTDCSGYVLKPR 901
                 ***566679******6 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0    0.0036       7.2       3      35 ..     930     968 ..     928     980 .. 0.76
   2 !   13.9   0.0   2.5e-05      0.05      35      67 ..     995    1027 ..     990    1065 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0036
                 EEEEEEEEESSSSSST...TSSCEEEEEEEE...ECEEE CS
          C2   3 levtvieAknLpnkdk...kgssdpyvkvsl...dgkqk 35 
                 +++  i+A++L + +    ++s dpy+++++   d+kqk
  KHJ31801.1 930 FSIDLISAQQLMRPKTlaqSRSFDPYIEIEVyhaDDKQK 968
                 67899******65544577889*********87644444 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 2.5e-05
                  EEEE-SC.SSSSSSEEEEEEEEEESCHTTSEEEE CS
          C2   35 kakTrvi.knslnPvWnekftfevaeleeakLev 67  
                  +++T++i +n +nP++n+kf+f+++  +  +L +
  KHJ31801.1  995 RRRTQIIsENGFNPIFNKKFNFSLTT-KYPELVF 1027
                  689**887888*************99.5555544 PP

>> EF-hand_like  Phosphoinositide-specific phospholipase C, efhand-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.1   1.1e-06    0.0021       1      46 [.     443     489 ..     443     528 .. 0.80

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 1.1e-06
  EF-hand_like   1 fYkiLtqreeideifqeyskdgek.lslkelveFLreeQkeedasee 46 
                   f k++ +re++ +i+++++ d++k ++lk++  FLre Q+e+ +s++
    KHJ31801.1 443 FVKLMKRREDVRSIYHQIATDTKKgVTLKDFFCFLREVQRESIESDQ 489
                   6789999**********998876549**************9855444 PP

>> EF-hand_10  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.1   1.8e-06    0.0035       7      49 ..     404     446 ..     399     447 .. 0.92

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 1.8e-06
  EF-hand_10   7 vkrlLreiNievddeYAekLFkkcDkSksgrLegeEieeFykl 49 
                 v rl r + i+ + eY ++ F ++D S+sgrL  +E++eF kl
  KHJ31801.1 404 VERLCRSLHINGSSEYLYSKFNQADVSRSGRLKLSEFQEFVKL 446
                 788999999*******************************996 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.9   1.3e-05     0.026       2      69 ..     418     476 ..     417     519 .. 0.59
   2 ?   -2.5   0.0       3.8   7.6e+03      11      21 ..     913     923 ..     904     925 .. 0.64

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.3e-05
   EF-hand_7   2 eklkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkl 69 
                 e l+ +F++ D+ ++g+l  +e++++++          k ++e ++ + + + td    +++ +F  +
  KHJ31801.1 418 EYLYSKFNQADVSRSGRLKLSEFQEFVK--------LMK-RREDVRSIYHQIATDTKKGVTLKDFFCF 476
                 56999*******************9666........222.3344444555554444444555554433 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 3.8
   EF-hand_7  11 lDtdgdgyldk 21 
                 +D+ ++gy+ +
  KHJ31801.1 913 FDKAQNGYVKR 923
                 56666666544 PP

>> GDPD  Glycerophosphoryl diester phosphodiesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     7e-05      0.14      12      58 ..     569     612 ..     554     650 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7e-05
                 SHHHHHHHHHTT-SEEEEEEEE-TTS-EEE-SSSBSTTTCSCCCH.B CS
        GDPD  12 TlesfakAaelGadyiEfDvqlTkDgvpVvlHDfnldrttdvagrld 58 
                 ++e++++A+ +G +++E+D    +Dg pVv+H ++l   +  a+   
  KHJ31801.1 569 SVEAYISALNRGCRCVEVDCWNGSDG-PVVMHGRTLTSQVSFAD--V 612
                 89***********************9.9*****99988777776..4 PP

>> PH_12  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00016      0.31      59     130 ..     281     354 ..     243     357 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00016
       PH_12  59 ltek.idlsdisevksgkeaphskesgksssslskksssklsfslitl......skekellelvasseseaaeWlDGLs 130
                  ++k   + di++++ g +a + +++        + + ++  fs+++       +  +++++l+a+++++++ W+  L 
  KHJ31801.1 281 RPSKsFYIDDIRDIRVGADARNYRQEF-----GVSVEDESRFFSIVYAipdkskGRAQKIMHLIADDQTTFELWITTLD 354
                 334448899********9998888654.....3788999999999999999999999*****************98875 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00041      0.83       2      27 ..     420     445 ..     419     448 .. 0.91
   2 ?   -2.3   0.0         3     6e+03       2      27 ..     453     478 ..     452     481 .. 0.79
   3 ?   -2.6   0.0       3.7   7.4e+03       8      17 ..     912     921 ..     911     924 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00041
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrkalr 27 
                 l+++F++ D++++G +  +E++ + +
  KHJ31801.1 420 LYSKFNQADVSRSGRLKLSEFQEFVK 445
                 7899******************9877 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 3
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrkalr 27 
                 +r++++++ +d    ++ +++  +lr
  KHJ31801.1 453 VRSIYHQIATDTKKGVTLKDFFCFLR 478
                 57788888888777799999999998 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 3.7
   EF-hand_6   8 lfDkdgdGki 17 
                 +fDk  +G++
  KHJ31801.1 912 IFDKAQNGYV 921
                 79******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.77u 0.28s 00:00:01.05 Elapsed: 00:00:00.45
# Mc/sec: 7489.04
//
Query:       KHJ31802.1  [L=540]
Description: putative t-complex protein 1 subunit gamma [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     2e-170  567.6   3.4   2.3e-170  567.4   3.4    1.0  1  Cpn60_TCP1  TCP-1/cpn60 chaperonin family
  ------ inclusion threshold ------
       0.13   11.9   0.0       0.26   11.0   0.0    1.4  1  BRK         BRK domain


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  567.4   3.4  2.6e-174  2.3e-170       1     490 [.      32     525 ..      32     526 .. 0.99

  Alignments for each domain:
  == domain 1  score: 567.4 bits;  conditional E-value: 2.6e-174
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHHHHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPaakllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegyekale 99 
                 +adi++++lGPk m+Kml +++g +v+TnDG++il+e+e++hPaak+++e++++qdeevGDGTttv+iLage+l  a   +++++hp++ii++++ al+
  KHJ31802.1  32 VADIIRSCLGPKAMLKMLLDPMGGIVLTNDGHAILREIEVSHPAAKSMIELSRTQDEEVGDGTTTVIILAGEILALALPQLERNIHPVVIISAFKNALK 130
                 699************************************************************************************************ PP

                 HHHHHHHHHXEEBXSCSTT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHH.HCHCCCS...EECSCCC.EECCCCEECECTTSEEESEEEESS--SST CS
  Cpn60_TCP1 100 kaleaLkeiaveisseekdreeLlkvartslsskltskeaeelsklvvdAv.klieene...keldlgr.ikvvkieggsledselveGlvldkgvlsp 193
                 +al +++ei  ++++++ d++++ +++++s+++k++++++e +++l++ Av +++ e +   ke+d++r  +v+ki gg++eds++++G++l+k++++p
  KHJ31802.1 131 DALHIIEEI--SLPVDTSDDKAMHQLIASSIGTKYVNRWSELMCNLALTAVrTVTHEVDvgiKEVDIKRyARVEKIPGGQIEDSKVLDGVMLNKDITHP 227
                 *********..8888899*********************************65555555**********9***************************** PP

                 TSSCEEECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECEEEESS-B-HHHHHHHHHCT-EEE-S--HHHHHHHHHH CS
  Cpn60_TCP1 194 dmpkklenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnvvvcqkgiddlalhflakngilalrrvkkkdlerlaka 292
                 +m +++en++++lld++Le++k e++t+v++s++e+++k+++ ee+q++ ++++i + + ++v+++kg++dla+h+++k+++ alrrv+k+d +r+a+a
  KHJ31802.1 228 KMRRRIENPRIVLLDCTLEYKKGESQTNVEISKEEDWNKILQIEEEQVKIMCDAILAVKPDLVITEKGVSDLAQHYFVKAKVTALRRVRKTDNNRIARA 326
                 *************************************************************************************************** PP

                 HT--EBSCGGGGGCGC-EEEEEE.EECCETTCCEEEEECESSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHHHHCC CS
  Cpn60_TCP1 293 tGatavssledltpeelGtakkv.eeekigsekttiieevksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakklkey 390
                 tGat+v+++edl+++++Gt + + e ekig+e++t++++++s+k++tillrg++++vl+eier++ dA+ v++n++ ++++ pGGGate+++a +l + 
  KHJ31802.1 327 TGATIVNRVEDLQESDVGTKCGLfEIEKIGDEYFTFLTKCQSPKACTILLRGPSKDVLNEIERNLADAMGVARNVLFHPRLSPGGGATEMAIAVRLGQL 425
                 *******************99999*************************************************************************** PP

                 CCTSXCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHHHHHHHHTTXTTEEEETTTTCEEECCCCTXEEEHHHHHHHHHHHHHHHHHHHCEEEEEXX CS
  Cpn60_TCP1 391 aksvsgeeqlaieafakALevipktLaeNaGldpievlaklraahnkgekelgidvesgeiidlveagvvDplkvkrqalksAteaastiLrideiika 489
                 ak ++g +q+ ++a+a+A+evip+tL++NaG++pi vl+ lra+h++ge ++gi+ ++g  +d+++ gv++p +vk+q++k+A e+a+++Lr+d+i++a
  KHJ31802.1 426 AKGIEGVQQWPYKAIAEAMEVIPRTLIQNAGASPIRVLTALRAKHAEGESTWGINGDNGGLVDMKSYGVWEPEAVKSQSIKTAIESACLLLRVDDICSA 524
                 *************************************************************************************************99 PP

                 X CS
  Cpn60_TCP1 490 k 490
                 k
  KHJ31802.1 525 K 525
                 7 PP

>> BRK  BRK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   2.9e-05      0.26       5      23 ..       3      21 ..       1      21 [. 0.93

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 2.9e-05
         BRK  5 erVpVinrktGkkLtGekA 23
                 +V V+n+++G ++tG+kA
  KHJ31802.1  3 APVLVMNTQSGNRQTGRKA 21
                5899*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 3779.65
//
Query:       KHJ31803.1  [L=589]
Description: putative siderophore biosynthesis protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.4e-49  164.8   0.0    1.4e-48  164.3   0.0    1.2  1  Acetyltransf_8  Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
      0.076   13.3   0.0       0.15   12.3   0.0    1.5  1  Acetyltransf_1  Acetyltransferase (GNAT) family


Domain annotation for each model (and alignments):
>> Acetyltransf_8  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.3   0.0   1.5e-52   1.4e-48       3     145 .]     423     569 ..     421     569 .. 0.93

  Alignments for each domain:
  == domain 1  score: 164.3 bits;  conditional E-value: 1.5e-52
                     GGGHHHHHHHCTSCCCHHHH-----H.HHHHHHHHHHC.STTEEEEEEEETTEEEEEEEEEEGGGCGGGGCS...---TT-EEEEEEESSHHHCT CS
  Acetyltransf_8   3 eaDlellhrWmnrprvaewweeagtl.eevrellakldadphsepliglldgepvgyfeiYwakedelaeyy...daepgdrGiHlligeaearg 93 
                     ++D +llhrWmn prv+++w+ +g+  ++++ l+++l + +hs+p+igl+dg+p+gyfeiYwaked l+++       ++drGiH+l+ge e+rg
      KHJ31803.1 423 MTDCQLLHRWMNIPRVSKFWGCDGPIlHQEEFLQKNL-EAQHSFPVIGLWDGKPFGYFEIYWAKEDILGRHIndgSIGDWDRGIHVLVGEDEFRG 516
                     58************************55555555566.5*****************************999988899****************** PP

                     TTCHHHHHHHHHHHHHC.CTT--EEEE--BTT-HHHHHHHHHTT-EEEEEEEE CS
  Acetyltransf_8  94 kglttallralvhylfa.dprtrrvvvEPdvrNerairllekaGfekekevdl 145
                     k++++ +l+al+h++f+ d rt++ v+EP+v+Ne++i++l++ Gf ke+ev++
      KHJ31803.1 517 KHRVKCWLTALAHWVFSeDYRTNSLVLEPRVDNEKFISYLQESGFLKEREVSF 569
                     ****************6377******************************986 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.7e-05      0.15      16     117 .]     450     561 ..     430     561 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.7e-05
                     HHHHHHHHHHHHHHSTTCEEEEEEETTEEEEEEEEEEEET.............TSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHT..TES CS
  Acetyltransf_1  16 nedaseeefeesfsleaegllvaeedgeliGfisllkipd.............ekggvayieslaVspeyrgkGlGsaLlealeeraree..gik 95 
                     ++++++       + ++++ +++++dg++ G+  +++  +                    i+ l+   e+rgk   +  l+al++++++e    +
      KHJ31803.1 450 HQEEFLQKNL---EAQHSFPVIGLWDGKPFGYFEIYWAKEdilgrhindgsigD--WDRGIHVLVGEDEFRGKHRVKCWLTALAHWVFSEdyRTN 539
                     3333333333...447778899***********877777766665555555321..34566677889***********************65557 PP

                     EEEEEEETTEHHHHHHHHHTTE CS
  Acetyltransf_1  96 kivlaveedndaairlYeklGF 117
                      +vl+ ++dn++ i ++++ GF
      KHJ31803.1 540 SLVLEPRVDNEKFISYLQESGF 561
                     78**************988998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (589 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       329  (0.0183502); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 4169.76
//
Query:       KHJ31804.1  [L=585]
Description: putative protein phosphatase 2c protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-44  152.1   0.0    4.2e-44  151.1   0.0    1.4  1  PP2C      Protein phosphatase 2C
    0.00031   20.5   0.0     0.0006   19.5   0.0    1.4  1  PP2C_2    Protein phosphatase 2C
  ------ inclusion threshold ------
      0.051   13.5   0.0        6.5    6.6   0.0    2.9  3  SpoIIE    Stage II sporulation protein E (SpoIIE)


Domain annotation for each model (and alignments):
>> PP2C  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.1   0.0     7e-48   4.2e-44      21     238 ..     187     458 ..     173     467 .. 0.87

  Alignments for each domain:
  == domain 1  score: 151.1 bits;  conditional E-value: 7e-48
                 CCCCTCTTCCCCCCEEEEEEEEESSSHHHHHHHHHHH.............HHHHHHHHCHTTHHHHHHHHHHHHH.HHHHHHHH.........HHHH.. CS
        PP2C  21 slanlesssgkssvsffavfdghggseaakyarehle.............eilksqksfeelekleqalrksfla.dtdeelks.........skan.. 94 
                 s+ n +s+s+ s++ f +vfdgh g  ++ + r+ l               +++++ + ++ e   +a++ +f + d ++++k+         +     
  KHJ31804.1 187 SRSNASSESSFSDWMFWGVFDGHSGWTTSAKLRQVLInfvarelnttlqaAVAQNNTDSPSNEAIHNAIKTGFTRlDDEIVIKNvektfkansK--Iaa 283
                 44455566999*********************9999955555555555444444444555555999*********9999999998887665542..055 PP

                 ..C.HCCT-EEEEEEEEEETTE..EEEEEESS-EEEEEETTEEE....EECS---STTSHHHHHHHHHTT--EEE..CCEEETTTBSBSB-EE-GGGTC CS
        PP2C  95 ..t.epsksGstavvalirgtk..lyvAnvGDSravLcrkgnak....keltedHkpsdedEreRIeeaggsvsn..gegrvngsLavsRalGDlelkp 182
                     +p  sGs+a+++++ +++  l+vA +GDSravL+r+g+++      l+ed+++s+++E +RI+++++  ++  ++grv+g L+ +Ra+GD  +k 
  KHJ31804.1 284 aeLlAPALSGSCALLSFYDSNSklLHVACTGDSRAVLGRRGENGkwtaMPLSEDQTGSNPNEQARIQKEHPEEDHviRNGRVLGGLEPTRAFGDASYKW 382
                 76569*************99999********************99*999*************************************************8 PP

                 CCC...................CCSTSB---EEEEEEE-TT.EEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHTHH CS
        PP2C 183 ket...................eeqlvsaePdvtsvkltee.defliLacdGlwdvlsdqeavdlvrdelekkksp 238
                   +                   ++++v+aeP vts++  +e ++fl++a+dGlw++ls++e+v lv  +lek++s+
  KHJ31804.1 383 SREiserlktsffgrtpskllqTPPYVTAEPVVTSTQVYPEkNDFLVMATDGLWEMLSNEEVVGLVGMWLEKQESK 458
                 6669*******************************************************************97755 PP

>> PP2C_2  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0     1e-07    0.0006      25     185 ..     200     445 ..     186     467 .. 0.80

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 1e-07
      PP2C_2  25 sll.aVaDGaGSakrSerGariaveavvealaelleseeee.......eeallraleaailadv...............lkeeaeaqdaelkdyatTll 100
                 +++  V DG+     S +  +++ ++v++ l+++l+++ ++       +ea+ +a+++ + +                  k +a++  a++ + +++ll
  KHJ31804.1 200 WMFwGVFDGHSGWTTSAKLRQVLINFVARELNTTLQAAVAQnntdspsNEAIHNAIKTGFTRLDdeiviknvektfkanSKIAAAELLAPALSGSCALL 298
                 4453599999999999999999999**999999997777777775666444545555444433377788888877766445555555779999999999 PP

      PP2C_2 101 aavvtpde.ivalqiGDGaivvrd..rdgevql..lgepdsgeyanqttfltsedaeeel....................................... 155
                  +  +  + + ++  GD+ +v+ +  ++g++ +  l+e+++g   n+ + + +e +ee+                                        
  KHJ31804.1 299 SFYDSNSKlLHVACTGDSRAVLGRrgENGKWTAmpLSEDQTGSNPNEQARIQKEHPEEDHvirngrvlggleptrafgdasykwsreiserlktsffgr 397
                 999776662668899*****986655779996655999*******************9999************************************** PP

      PP2C_2 156 ...................rirrlkledgdalllmTDGlanslrdeerf 185
                                      ++ + e+ d l+++TDGl ++l++ee +
  KHJ31804.1 398 tpskllqtppyvtaepvvtSTQVYP-EKNDFLVMATDGLWEMLSNEEVV 445
                 ***************9986666666.67899************987753 PP

>> SpoIIE  Stage II sporulation protein E (SpoIIE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.021   1.3e+02      24      93 ..     228     325 ..     214     350 .. 0.64
   2 ?    6.6   0.0    0.0011       6.5     111     138 ..     412     439 ..     400     456 .. 0.81
   3 ?    0.1   0.0      0.11   6.7e+02     133     190 ..     501     556 ..     501     558 .. 0.68

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.021
                 HHHHHHHHHHHHTTTS...........HHHHHHHHHHHCHCTTSTT..........................TTCEEEEEEEETTTTEEEEEEESSSSE CS
      SpoIIE  24 gllrsalrelatagle...........paevlkrlnralardleee.........................erfaTavlavydpstgkleyanaGhppp 86 
                 ++l ++l+++++++ +            ++          ++l++e                           +  a+l  yd +++ l++a  G++  
  KHJ31804.1 228 RELNTTLQAAVAQNNTdspsneaihnaIKTGF--------TRLDDEiviknvektfkanskiaaaellapaLSGSCALLSFYDSNSKLLHVACTGDSRA 318
                 55555555555444444654444444422222........22222233333333455555555776777745556666777****************99 PP

                 EEEETTS CS
      SpoIIE  87 llvrpdg 93 
                 +l r+ +
  KHJ31804.1 319 VLGRRGE 325
                 9988844 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0011
                 ST-EEEEEEE--TTEEEEEESCCCCSSS CS
      SpoIIE 111 eadyetaelelepgdtlllyTDGvtEar 138
                 e  ++++++  e++d l+++TDG+ E  
  KHJ31804.1 412 EPVVTSTQVYPEKNDFLVMATDGLWEML 439
                 5566777788899***********9987 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.11
                 CCCSSSHHHHHHCCCHHCHHHHCT.....HCCHHHHHHHHHHHHTTSSSSS-EEEEEE CS
      SpoIIE 133 GvtEardsdgelfgkerllallasaegesleelldalveellelgsgeleDDitllvl 190
                 G+tE + ++ +  +++++ +l+++a g + +e+l al++   + +s++ +DD+t+ v+
  KHJ31804.1 501 GLTEEE-QRFTVQDRNAATHLVRNALGGKNSEMLCALLSLPAP-YSRRYRDDLTVQVI 556
                 566655.333333334444777777777788888888888888.999*******9775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.24s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4108.76
//
Query:       KHJ31805.1  [L=485]
Description: putative duf6 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-13   50.5  31.3    4.9e-08   33.2   1.0    2.7  3  EamA            EamA-like transporter family
    8.3e-10   38.2   6.8      2e-09   36.9   5.8    2.1  2  CSG2            Ceramide synthase regulator
     0.0017   17.6   4.2     0.0035   16.6   4.2    1.5  1  Nuc_sug_transp  Nucleotide-sugar transporter


Domain annotation for each model (and alignments):
>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.2      0.71   4.2e+03      33      56 ..     119     142 ..     112     177 .. 0.58
   2 !   33.2   1.0   8.3e-12   4.9e-08      64     136 ..     221     294 ..     203     295 .. 0.82
   3 !   26.4  18.3   1.1e-09   6.5e-06       5     135 ..     329     472 ..     325     474 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.71
        EamA  33 ltfvrfliagillliiallkegkl 56 
                 +t +r+ + ++ l++i+++ +   
  KHJ31805.1 119 ITKYRYAAFFLGLSLISFVVQTET 142
                 444555555555555555544444 PP

  == domain 2  score: 33.2 bits;  conditional E-value: 8.3e-12
        EamA  64 wlll.lllgllgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvllil 136
                 +l+    + + + ++a + +++a++ ts+s  + i + +  f+  +sv  lgekl + ++l++v++++Gvl+++
  KHJ31805.1 221 YLIRtTTIVTCALTVAGGSWYIAVNLTSPSDLTAIYNCSAFFAYAFSVPMLGEKLRWDKILAVVVAIAGVLVVS 294
                 4444233333455566689*****************************************************97 PP

  == domain 3  score: 26.4 bits;  conditional E-value: 1.1e-09
        EamA   5 llallaalfwaiyfvlskil.......lrkvspltltfvrfliagilllii.......allkegklaklslkdwllllllgllgtvlafllffyalkkt 89 
                 l++ ++++++++y vl k+l       ++  s l+++++ +li+ + l+++       +++  +k+ +l++ + ++ll++++l++ ++ + f+++++ t
  KHJ31805.1 329 LVIGVGSVLYGFYEVLYKRLacppegtSAGRSMLFANTFGSLIGIFTLCFLwvpipilHFIGLEKF-ELPHGEAAWLLVVSILSNSIFSGSFLTLISLT 426
                 555666777777777777774443322222255666666666666666555666676688888888.9******************************* PP

        EamA  90 sasnaslitslePvftlilsvlllgekltlkqllgivlillGvlli 135
                 s+   s++ +l+  +++i  +l+ g +l+   ++g +li+++ + +
  KHJ31805.1 427 SPLLSSVAALLTIFLVAIVDWLWTGIPLSPAAIVGGILIIIAFATL 472
                 *****************************************98766 PP

>> CSG2  Ceramide synthase regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.19   1.1e+03     115     153 ..      98     137 ..      61     151 .. 0.57
   2 !   36.9   5.8   3.4e-13     2e-09     126     368 ..     204     449 ..     153     475 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.19
        CSG2 115 ekteeeklekvae.kekkllsvstlkyvakllilslllvi 153
                 + +e ++l++++  k+++l s ++ +y+a +l lsl+  +
  KHJ31805.1  98 SSSEGSSLRSISPdKSTELESITKYRYAAFFLGLSLISFV 137
                 3334444444444466677777777777766666666544 PP

  == domain 2  score: 36.9 bits;  conditional E-value: 3.4e-13
        CSG2 126 aekekkllsvs...tlkyvakl.lilslllviavltynlaLslsPafdvaliqntsiFeivtLLygvcgiarrknvfrnflvmmvaligilivsYtkat 220
                  e ++ ++s +    + y+++  +i++  l +a  ++ +a++l+   d++ i n s+F   +  ++v  +  + +   + l ++va+ g+l+vsY    
  KHJ31805.1 204 VETQQPIISRTqhsPVPYLIRTtTIVTCALTVAGGSWYIAVNLTSPSDLTAIYNCSAFF--AYAFSVPMLGEKLR-WDKILAVVVAIAGVLVVSYGDSV 299
                 3334444443311146666654157788999**************************96..56688888877655.78999****************99 PP

        CSG2 221 CDlLaGklsinketGelnDpfLFDRLkgaLiCGLgaLtiGpfavlwnrWfa....eskkaslvkqsehlsligiislilllpflpklssssesisllys 315
                      Gk       G+ +D    +R+ g L+ G+g++  G + vl++r  +    +s+ +s+    +  sligi++l +l   +p l+        l +
  KHJ31805.1 300 STKDGGKSGGAVGGGDAQDKEAKNRVVGNLVIGVGSVLYGFYEVLYKRLACppegTSAGRSMLFANTFGSLIGIFTLCFLWVPIPILHFIGLEKFELPH 398
                 9999*********************************************99999977777777777789************999*99996666667788 PP

        CSG2 316 dksfwlt....llvsilfGtlpnllsllelnrkaspeylttvnlgiiifmgladwic 368
                  +  wl     l  si+ G++ +l+s       +sp  ++   l +i +++++dw+ 
  KHJ31805.1 399 GEAAWLLvvsiLSNSIFSGSFLTLIS------LTSPLLSSVAALLTIFLVAIVDWLW 449
                 99999752221123455555555555......5799999999999999999999985 PP

>> Nuc_sug_transp  Nucleotide-sugar transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   4.2   5.8e-07    0.0035     116     311 ..     256     469 ..     227     473 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 5.8e-07
  Nuc_sug_transp 116 yqlkilttalfsvllLkrklskkqWlslllLvaGvalvqlkqkeseesekaaaaa.........keensvlGliavlaacllsgfaGvYfekiL. 200
                     y    +   +fsv +L+ kl   + l++++ +aGv +v + ++ s+++  ++  a         +++n+v+G   + +  +l gf  v + ++  
      KHJ31805.1 256 YNCSAFFAYAFSVPMLGEKLRWDKILAVVVAIAGVLVVSYGDSVSTKDGGKSGGAvgggdaqdkEAKNRVVGNLVIGVGSVLYGFYEVLYKRLAc 350
                     55555666789*****************************999988887766666799999998999***********************99973 PP

  Nuc_sug_transp 201 ....kdsnvslWirniqlallsiil.alltvllkdgskisekGffkGydlvvwvvvl...lqa.vGGlvvavvvkyaDnilkgfatslaiilstv 286
                          ++  s+   n   +l++i++ ++l v +   + i  + f   + ++ w++v+    ++ + G +++  +  +  +l + a+ l+i l+++
      KHJ31805.1 351 ppegTSAGRSMLFANTFGSLIGIFTlCFLWVPIPILHFIGLEKFELPHGEAAWLLVVsilSNSiFSGSFLT-LISLTSPLLSSVAALLTIFLVAI 444
                     33223455699999999999999853777777777788887778777878888766521134424555554.578999***************** PP

  Nuc_sug_transp 287 asvllldlkitllFllGallviaav 311
                     + +l+ ++ ++   ++G +l+i+a 
      KHJ31805.1 445 VDWLWTGIPLSPAAIVGGILIIIAF 469
                     *********************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       833  (0.046461); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 3431.39
//
Query:       KHJ31806.1  [L=714]
Description: putative transcription factor 25 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-63  215.6   1.6    1.7e-63  214.8   1.6    1.3  1  Tcf25     Transcriptional repressor TCF25


Domain annotation for each model (and alignments):
>> Tcf25  Transcriptional repressor TCF25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.8   1.6   9.6e-68   1.7e-63       1     350 []     256     576 ..     256     576 .. 0.89

  Alignments for each domain:
  == domain 1  score: 214.8 bits;  conditional E-value: 9.6e-68
       Tcf25   1 FkfekskeykeaqnlFlqlvdshDpealinllkkyPYHvdtLLqlsevyresedlevAndlieraLfalerafhisFhenllnltsgeirldyelveNR 99 
                 F++ ++++y+++qnlF + v+  Dp+ l++ll k+P H+  LLq+s++++  ++++ ++dl+eraLf + +a  ++F   +++l++g++rl++ ++eNR
  KHJ31806.1 256 FRYVHNQNYQKVQNLFHRGVEIADPQLLVSLLVKNPDHISLLLQVSKIAKSLGNHSLSSDLLERALFFFGKAATSQF---TCKLSQGKARLNFARFENR 351
                 8999*************************************************************************...88999************** PP

       Tcf25 100 alflalfrhilslerrgctrTaleiaKlllsldpaeDplgillfiDflalksneyefLiklseefeiqrvqsvllfelsel......pnfafslaLaly 192
                 +l+la + +i+sl ++g++rTale+aKlllsl+p  Dp++++l+i +l l+++eye+L +l+++  + +     +++++ l           slaLa +
  KHJ31806.1 352 ELWLAGYNYIKSLMMKGTYRTALEWAKLLLSLNPGGDPYCMRLLIHNLSLRCHEYEWLFDLYDTGFHYQ-----WSNNTGLmsknlySHTKISLALAAI 445
                 **************************************************************9944433.....4444444443445888899999999 PP

       Tcf25 193 lkenkkklslsekakeaLqrAllrfPsvlqlLleklnvkttvkvtseslfkdssessfseeeelellqklYlersnilwkeeevitwLesevaelhell 291
                       + +++eka+e L++ ++r P+  + L+++ln++ + +++         ++ + ++e+  l +k+Y++++++lw  +e+++ L ++  ++++ +
  KHJ31806.1 446 ------HMKNREKAREILRESMIRLPWLYYCLFSELNLEIPPSLS---------DHCEPNSEADALFAKIYINQTKDLWDTPETTSLLMETGYTITK-F 528
                 ......899********************************9996.........44455889999*************************9933322.2 PP

       Tcf25 292 kdkkryseekpaakeahsk.ldiniyrhvivselkslnallPdeimeknrsvlefDplpP 350
                 ++        p     +s+ ++++++r++ + + +++ al+P+e m+ + +  + Dp+pP
  KHJ31806.1 529 EN--------P---VDCSDvVSLDVVRFIYLDGSSETLALIPRERMNFEVNSDS-DPIPP 576
                 32........3...23444589***********************986666666.**999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (714 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       988  (0.0551063); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.40
# Mc/sec: 5329.73
//
Query:       KHJ31807.1  [L=581]
Description: putative cytochrome b-245 heavy chain subunit beta [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.6e-33  113.8   0.0    1.4e-32  112.9   0.0    1.5  1  NAD_binding_6  Ferric reductase NAD binding domain
    1.7e-20   73.1   0.8    4.3e-20   71.8   0.0    2.1  2  FAD_binding_8  FAD-binding domain
    2.4e-20   72.9  18.7    1.4e-19   70.4  12.7    2.4  2  Ferric_reduct  Ferric reductase like transmembrane component
  ------ inclusion threshold ------
      0.058   14.0   0.0       0.15   12.7   0.0    1.8  1  NAD_binding_1  Oxidoreductase NAD-binding domain


Domain annotation for each model (and alignments):
>> NAD_binding_6  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.9   0.0   3.2e-36   1.4e-32       1     149 [.     408     549 ..     408     556 .. 0.91

  Alignments for each domain:
  == domain 1  score: 112.9 bits;  conditional E-value: 3.2e-36
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6   1 yenvllvagGiGitpfisilkdllkksk..kealktkkikliwvvressslewfkdvLneleeeksegnieihiYlTseyeaedasdqlissiege 94 
                    ye  llv++GiG+tpf+silk ++++++  ++++  +k+++ wv+r+ +s+ewf+ +L  +e +++e+ ieih+YlT   +a+da++ +i+     
     KHJ31807.1 408 YEIALLVGAGIGVTPFASILKSIWYRMNypQKKTCLRKVYFFWVCRDFGSFEWFRSLLLAIEAQDKENIIEIHTYLTARIKADDATNIMIND---A 500
                    56779**********************988888999*************************************************8855554...5 PP

                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6  95 nseslkqgvdavsgtrnvkihfgRPnlkevlkdiaskhknssvgvfvCGppklvk 149
                    n++      da++g+r + ++fgRPn++ v+k+i + h  ++ gvf CGp++l  
     KHJ31807.1 501 NAD-----RDAITGLR-APTNFGRPNWDMVFKSICKIHTPAEAGVFFCGPKVLGS 549
                    555.....48899***.**********************************9976 PP

>> FAD_binding_8  FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.3       2.5   1.1e+04      28      51 ..     217     236 ..     203     237 .. 0.58
   2 !   71.8   0.0   9.5e-24   4.3e-20       7     108 ..     290     401 ..     286     402 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.5
  FAD_binding_8  28 lkykaGqyvyinipslsklfwqsH 51 
                     ++  + +++i +     +fw +H
     KHJ31807.1 217 ERFWYTHHMFIVF----FFFWSIH 236
                    4555677788765....2366666 PP

  == domain 2  score: 71.8 bits;  conditional E-value: 9.5e-24
  FAD_binding_8   7 akvalleedliklkvskpkkslkykaGqyvyinipslsklfwqsHPFtiasapeddklslvikvksgltkklakkllsssk..............k 88 
                     kv   ++++ +++++k +   k kaGqy++  +p++s   wq HPFt++sape+d++s++i+  +++tk + + l  + +              +
     KHJ31807.1 290 SKVVHHPSNVCEIQIKKENT--KTKAGQYIFFCCPEVS--VWQYHPFTLTSAPEEDYISIHIRMVGDFTKAVGRALGCQLDksdkssqvlsegqgN 381
                    5788899************7..****************..89******************************99886654468899****999764 PP

  FAD_binding_8  89 elenkkaklkvlidGPYGap 108
                    ++  +   ++v idGP+G++
     KHJ31807.1 382 DAGINRVLPRVYIDGPFGSA 401
                    444566677*********87 PP

>> Ferric_reduct  Ferric reductase like transmembrane component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.4    0.0036        16      43      64 ..      61      82 ..      26     108 .. 0.74
   2 !   70.4  12.7   3.1e-23   1.4e-19       4     123 ..     111     232 ..     101     233 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0036
  Ferric_reduct 43 lafllallHvilyllnflrfsa 64
                   ++f++a +H++++++ f+ ++ 
     KHJ31807.1 61 FVFVFAAIHAMVFTFGFMNYQI 82
                   799**************98763 PP

  == domain 2  score: 70.4 bits;  conditional E-value: 3.1e-23
  Ferric_reduct   4 aalillplall.la.lRnnflepltglsldklllfHkwlgvlafllallHvilyllnflrfsaldeerlldsllkkpynl....lGvlalllliil 93 
                    +a+il+p+    ++ +R+++l+    +++dk+++fHk++++ +++++++H+i++  nf + sa+ ++  ++ +l  ++++    +G ++l +l+++
     KHJ31807.1 111 VAMILFPVCRTlISlARQTPLN--GIIQFDKNITFHKLTAWSIVFFSWVHTIAHWNNFAQISAK-NNLGFAGWLLANFVTgpgwTGYVMLTALMLM 203
                    4666666655434468998887..6678********************************9986.4555555555555545555************ PP

  Ferric_reduct  94 aitSlkfirrrlsyelFyylHhllyvayll 123
                    ++tS++  r r ++e F+y+Hh+++v++++
     KHJ31807.1 204 VVTSVEKAR-RANFERFWYTHHMFIVFFFF 232
                    *********.*****************985 PP

>> NAD_binding_1  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.3e-05      0.15       1      79 [.     413     499 ..     413     548 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.3e-05
                    EEEEGGGGHHHHHHHHHHHHHCT......TCSEEEEEEEESSGCGS.TTHHHHHHHHHHCTTEEEEEEE..ESSCTTTSSSEESSHHH CS
  NAD_binding_1   1 miagGtGiaPvrsvlraileeak......dktkvvlvyGnrteedl.lyreeleelakklpgrlkvvav..vsreeagweggkgrvqd 79 
                    ++++G G++P+ s+l+ i  + +        +kv++++ +r   ++  +r  l +++++ ++++  +++  + r +a++   +  ++d
     KHJ31807.1 413 LVGAGIGVTPFASILKSIWYRMNypqkktCLRKVYFFWVCRDFGSFeWFRSLLLAIEAQDKENIIEIHTylTARIKADD-ATNIMIND 499
                    79**************999875567777777899999999999876467888888888888855544444345554444.44444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (581 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.37
# Mc/sec: 4682.95
//
Query:       KHJ31808.1  [L=1131]
Description: putative nadp-dependent malic enzyme [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-96  321.7   0.0    3.9e-96  321.3   0.0    1.2  1  Malic_M          Malic enzyme, NAD binding domain
      2e-60  203.7   0.0    3.4e-60  203.0   0.0    1.4  1  malic            Malic enzyme, N-terminal domain
    5.6e-10   39.1   0.0    1.7e-09   37.6   0.0    1.9  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase
  ------ inclusion threshold ------
      0.011   15.8   1.3      0.017   15.2   0.4    1.7  1  ArfGap           Putative GTPase activating protein for Arf


Domain annotation for each model (and alignments):
>> Malic_M  Malic enzyme, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  321.3   0.0  8.7e-100   3.9e-96       1     257 [.     260     514 ..     260     515 .. 0.98

  Alignments for each domain:
  == domain 1  score: 321.3 bits;  conditional E-value: 8.7e-100
                 THHHHHHHHHHHHHHHHHH-S-GGG--EEEEC-SHHHHHHHHHHHHHHHTTTS-HHHHHTTEEEEETTEE-BTT-.S---TTTGGGSBS--SS--S... CS
     Malic_M   1 iqgTaavalagllaalkitgkklseqkivvlGaGsagiGiaeqivealvkeGlseeeakkkiylvDrkGLltedr.ekleeekkpfakkkeelkeakdk 98 
                 +qgT+av l+g+++alk+t+ ++++q+ v++GaGsag+G+a+qiv+ ++k Gl+eeea+ k++lvD+kGL+t+dr + l+++kk f + +++ ++    
  KHJ31808.1 260 VQGTGAVILGGIINALKMTSIPIKDQRAVFMGAGSAGVGVAKQIVAYFMKCGLTEEEARLKFWLVDTKGLVTDDRgDMLAPHKKYFSRPDNNGHQF--- 355
                 7**************************************************************************566899*******99999966... PP

                 .SHHHHHHHH--SEEEE-SSSSS-S-HHHHHHHHHHSSS-EEEE--SSGGGSSS-HHHHHHHTTT-SEEEESS----EEETSEEE--EE--GGGTHHHH CS
     Malic_M  99 ltLeevvkkvkptvliGlsgvagafteeivremaksterPiilplSNPtskaEataedvlkwtdgkalvasGsPfkpvelngktyeigQaNNayifPgl 197
                 +tL+evv+ vkpt+l+Gls+++gafte i+r+ma  +++Pii+plSNP++k+E+t+e+++kwtdg++++asGsPf p  +ngk+++++Q+NN+y+fPg+
  KHJ31808.1 356 KTLAEVVDYVKPTILMGLSTTRGAFTEVIIRKMALLNKKPIIMPLSNPSDKSECTFEEAVKWTDGRVIFASGSPFLPFLYNGKMMYPSQGNNMYVFPGI 454
                 8************************************************************************************************** PP

                 HHHHHHTT-SS--HHHHHHHHHHHHTT--HHHHHTT-SS--GGGHHHHHHHHHHHHHHHH CS
     Malic_M 198 glgvivarakritdemllaaaealaelvseeelkegsllPelseirevslkvavavakaa 257
                 glg i+++a  i++em++++a+al++++s+ee ++g+l+P++++irevs+ va +v+++a
  KHJ31808.1 455 GLGSILCKAMLINEEMIYTSATALSTTLSDEEFADGKLYPNIDRIREVSVVVAREVIREA 514
                 *********************************************************998 PP

>> malic  Malic enzyme, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.0   0.0   7.5e-64   3.4e-60       3     172 ..      74     242 ..      72     250 .. 0.97

  Alignments for each domain:
  == domain 1  score: 203.0 bits;  conditional E-value: 7.5e-64
                 TECCCCCCHHCCCHHHHHHHHSTTCHHHHHHHHHHHGGCHHSCCCEGGGETCHHHHHTTSS.SS..EEEEE-SSSBTTTBS-GHHHHHHHHHHHHHHHH CS
       malic   3 knetlfykllkekleellpivYtPtvgeacqeyseeyrkarglylsikdkekikeilknlpeedvkvivvtdgeriLGlGdlGvagvgimvGKlaLyta 101
                  n  lfy+ll ++++   p+vYtP vgeac ++se+yr ++gly+s+kd+++i e+l+n+ + +v++ vvtdg+riLGlGdlGv+g+gi+vGKlaLyt 
  KHJ31808.1  74 ANTHLFYRLLIDNFTLITPLVYTPVVGEACLRWSEIYRFPEGLYISYKDRGSIIEVLRNWRQPKVEITVVTDGSRILGLGDLGVNGMGIPVGKLALYTG 172
                 6889*********************************************************************************************** PP

                 HHS-EGGGEEEEEECS-BS.HHHHC.TT..S.SSB...SHHHHHHHHHHHHHHHHHHGCTSEEEE-S--CC CS
       malic 102 lagidPekvlpvvldvgtnneelledplYlGlrkkRvkgeeydefvdefveavkelfppkaliqfEDfkak 172
                 +agi+P+k+lp++ld+gtnne ll+++lY+G+r kR++++e  ef+de++ a ++++ p +++qfEDfk++
  KHJ31808.1 173 CAGISPDKTLPLMLDFGTNNEGLLNNKLYMGARMKRISEKEELEFMDELMVALNTVW-PGIIVQFEDFKNP 242
                 *********************************************************.9*********986 PP

>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.0   3.7e-13   1.7e-09      19     119 .]     968    1062 ..     955    1062 .. 0.85

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 3.7e-13
  Exo_endo_phos_2   19 stlekllselkspkiiilGDfNakhplWgsedtdssargeeLiefleehslsllnllksgptfkssngsstiDltltsdnlalskleleeed 110 
                       +t++ ll+ ++++k i++GDfN    +W+ + ++  ++gee++++ ee++l++l     +pt++     +t+Dl +t+ + +   +  +ee 
       KHJ31808.1  968 TTVRPLLDWVPTSKSIVIGDFNSVYWAWKPSANSCYRQGEEIEKWAEEYNLTCLIV--GEPTYRA---GNTLDLAFTNISETMA-WVCTEEC 1053
                       56777888888889**************99665559****************6666..45***66...578**********999.8888899 PP

  Exo_endo_phos_2  111 lgSDHrpil 119 
                       ++S H+pi+
       KHJ31808.1 1054 MTSVHLPIF 1062
                       *****9985 PP

>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.4   3.7e-06     0.017      15      91 ..     827     901 ..     816     914 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 3.7e-06
                 B-TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG CS
      ArfGap  15 vCaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekr 91 
                  C +Cg+++ +   l+++++ C +C+g Hrs  +h    r ++    ++e++++++++g ++ +++l a+  +e+  
  KHJ31808.1 827 SCGNCGSTNHS-EDLSMAATKCRNCAGPHRSD-SHKFLARPTRSGVPTKEQMKTFRQVGKREYQAVLRARAAEESAT 901
                 69999887754.678899999**********8.89999*****************************9999777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       514  (0.0286686); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.43
# Mc/sec: 7884.71
//
Query:       KHJ31809.1  [L=546]
Description: putative mis6 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-12   47.4   0.1    4.8e-12   45.4   0.1    2.0  1  CENP-I    Mis6
  ------ inclusion threshold ------
      0.094   12.8   0.0        1.8    8.6   0.0    2.8  3  ParcG     Parkin co-regulated protein


Domain annotation for each model (and alignments):
>> CENP-I  Mis6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.1   5.3e-16   4.8e-12     326     513 ..      98     282 ..       1     284 [. 0.83

  Alignments for each domain:
  == domain 1  score: 45.4 bits;  conditional E-value: 5.3e-16
      CENP-I 326 llstdesfpveqlqtfpqllenihclelpsqmgsvlknslllhylncvkdesvllrlyywlsqtlqeecvwykvddseeeeefkefleliiraecflqe 424
                 + +++ s+  e+++  + l++   ++ +p q+ ++l ++ll ++l     es l r+ +wl   ++++     +++ +      e+l li+      ++
  KHJ31809.1  98 SHTQESSITLEEIENIHGLVRYFERIHVPNQLVAMLGDPLLQKFLQLRSSESDLKRIDHWLLAFFEDKLSRGCTENGD----VSEILRLILEYTNSSKK 192
                 445678999********************************************************9998887777766....55666666666666678 PP

      CENP-I 425 GfssceeflykslplwdGlscrsqilklvswiplssfseiksllldplaqlfft.ssiyfkcsvleslkellqnwllslstdldlepvld 513
                   s+c  ++   +p w+Gl  r  il+l+ +  l sf +i   ll pl +  ++  s+  k ++l+    ll+ w     ++ ++ ++++
  KHJ31809.1 193 IPSACISYIKSMIPTWNGLRDRDIILDLLVYTQLDSFEDIFENLLSPLEEAILSdGSVDSKLALLKFYTALLNRWTIGVLIQPESASIIE 282
                 889*********************************************986664279******************999999888888876 PP

>> ParcG  Parkin co-regulated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.19   1.7e+03      27      63 ..      47      83 ..      43     150 .. 0.70
   2 ?    8.6   0.0    0.0002       1.8      99     165 ..     178     243 ..     168     256 .. 0.88
   3 ?   -0.4   0.0      0.12   1.1e+03     140     164 ..     514     538 ..     501     541 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.19
       ParcG 27 WkveiekLdydalLplffdGlretkhpyrflategik 63
                W+  +++++ +alL  + d l+ +++  r++ ++gi+
  KHJ31809.1 47 WRDRLDEIQKQALLLKMQDTLVCEDKNCRLFKNRGIY 83
                6666677777777777777777666666666666654 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0002
       ParcG  99 saLkvlqklvkaseligeaLvpyyrqlLpvlnlfknkrvnlgdkidyrkkknikdliqetlellern 165
                   L+++ +  ++s+ i +a ++y++ ++p+ n ++++   + d + y++ ++++d+ ++ l  le+ 
  KHJ31809.1 178 EILRLILEYTNSSKKIPSACISYIKSMIPTWNGLRDRD-IILDLLVYTQLDSFEDIFENLLSPLEEA 243
                 567888888899********************999999.899*******************999986 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.12
       ParcG 140 gdkidyrkkknikdliqetleller 164
                  d ++ +    i+dli++tl++l++
  KHJ31809.1 514 LDYLEEMGAPGISDLIHSTLKNLSN 538
                 455555777889*********9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 4197.74
//
Query:       KHJ31810.1  [L=464]
Description: putative trna isopentenyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      3e-60  203.9   0.2    4.9e-60  203.2   0.2    1.3  1  IPPT            IPP transferase
    0.00022   21.8   0.0      0.029   14.9   0.0    2.7  2  AAA_18          AAA domain
    0.00023   20.7   0.0    0.00045   19.7   0.0    1.4  1  IPT             Isopentenyl transferase
     0.0067   16.6   0.0      0.032   14.4   0.0    2.1  2  AAA_33          AAA domain
     0.0089   16.4   0.1      0.017   15.5   0.1    1.4  1  zf-met          Zinc-finger of C2H2 type
     0.0091   15.8   0.0      0.022   14.5   0.0    1.6  1  Cytidylate_kin  Cytidylate kinase
  ------ inclusion threshold ------
      0.014   15.8   0.0      0.037   14.4   0.0    1.6  1  AAA_16          AAA ATPase domain
      0.014   15.9   0.0      0.054   14.0   0.0    2.0  2  ABC_tran        ABC transporter
      0.026   14.1   0.1      0.054   13.1   0.1    1.4  1  AAA_25          AAA domain
      0.072   13.5   0.0       0.16   12.3   0.0    1.6  1  RNA_helicase    RNA helicase
      0.077   13.0   0.0       0.25   11.3   0.0    1.9  1  AAA_5           AAA domain (dynein-related subfamily)
      0.089   11.6   0.0       0.15   10.9   0.0    1.2  1  PPV_E1_C        Papillomavirus helicase
      0.095   12.7   0.0        0.4   10.7   0.0    1.9  2  B12-binding     B12 binding domain
       0.13   12.6   0.0       0.31   11.5   0.0    1.7  1  AAA             ATPase family associated with various cellula
       0.14   12.6   0.2       0.62   10.6   0.0    2.1  2  zf-3CxxC        Zinc-binding domain


Domain annotation for each model (and alignments):
>> IPPT  IPP transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.2   0.2   4.1e-63   4.9e-60       1     223 [.      52     335 ..      52     339 .. 0.83

  Alignments for each domain:
  == domain 1  score: 203.2 bits;  conditional E-value: 4.1e-63
                 TTBTT-HTTTT---HHHHTTS-EESSS-B-TTS.---HHHHHHHHHHHHHHHHHTT-EEEEEES-HHHHHHHHCTG.-S-......-B--HHHHHH.HH CS
        IPPT   1 qvYrgmdIgTakptaeeragvphhlidildpde.eysvadFqkdalkaieeilargkipilvGGTglYikallegl.del......peadeelrae.le 90 
                 q+Y g++I+T+k+t ee +g+phhl++ +++de ++ ++ Fq++a++++++i+arg++pi+vGGT++Yi++ll  + d++      +++d++l +e ++
  KHJ31810.1  52 QMYAGLPIITNKITYEEEQGIPHHLLGNVQLDEePWRIGVFQREAKNIMRQIRARGRVPIVVGGTHYYIQSLL--FrDSIigereaDDSDHKLGQEsID 148
                 89*****************************9989**************************************..666666754322223355444144 PP

                 HH.HHHSH.HHHHHHHHHHC-HHHHTTS-TT-HHHHHHHHHHHHHHSS-HH..............................ECEEEEEECSHHHHHHHH CS
        IPPT  91 ee.aeeeg.lealheelkevdpeaaakihpndrqRiiRalevyeetgkpls..............................ellviglesdreelyeri 157
                 e  + + g  e++ e+lkevdp +a+++hpnd+++i+R+l+++ etg+++s                              ++l+++++++ e+l++r+
  KHJ31810.1 149 EFpILN-GpSERILEKLKEVDPLMAERWHPNDTRKIMRSLKIFLETGERASdlyarqqeyrdkncqdsskidffgenispeSTLLFWIYAEPEVLKKRL 246
                 443444.43777***************************************89999888888888888888777777777546*****99********* PP

                 HHHHHHHHHTTHHHHHHHHHH...............C.CCCSTTSHHHHHHHTT.......SS-HHHHHHHHHHHHHHHHHHHHHHHHT CS
        IPPT 158 dkRvdemleaGlleEveklla...............k.alqaigykelleyleg.......elsleeaieklkaatrqyaKrQltWfrk 223
                 d+Rv +m+e Gll+Ev+++ +               + ++ +ig ke+ +y          e  l+  i+k+++atrqyaKrQl+W+r 
  KHJ31810.1 247 DDRVIKMVETGLLDEVKSIDQylekqlsngikiditRgIWASIGWKEFESYRLAlktgtdvENALNFSIQKTQIATRQYAKRQLRWIRL 335
                 ******************987777777766655554234**********99853223333244577899******************95 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   2.4e-05     0.029       2      36 ..      21      54 ..      20     108 .. 0.79
   2 ?    4.2   0.0     0.051        61      81     114 ..     220     250 ..     165     265 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.4e-05
      AAA_18  2 lltGtpGvGKttlakeLskrlgfgvnlrdvakeng 36
                ++ G+ G+GK++la  L+kr  +g+++++ a + +
  KHJ31810.1 21 FVLGATGTGKSSLAVDLAKRF-NGEIINSDAMQMY 54
                689*****************5.4777777776655 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.051
      AAA_18  81 ghlaeleseaakdikk......vvLtaspeelleRlekRg 114
                  + ++                 ++++a+pe+l++Rl +R 
  KHJ31810.1 220 FFGENI---------SpestllFWIYAEPEVLKKRLDDRV 250
                 333333.........0333444999***********9996 PP

>> IPT  Isopentenyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   3.8e-07   0.00045       6      58 ..      22      74 ..      19     101 .. 0.83

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 3.8e-07
         IPT  6 ifGatttGKtaeaiklaketgapvivlDRvqcyselavgsGrpleeelegtrR 58
                + Gat+tGK++ a+ lak+    +i  D +q y  l + + + + ee +g+  
  KHJ31810.1 22 VLGATGTGKSSLAVDLAKRFNGEIINSDAMQMYAGLPIITNKITYEEEQGIPH 74
                78*******************************99988887777777777655 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   2.7e-05     0.032       3      33 ..      21      60 ..      20     125 .. 0.70
   2 ?   -2.3   0.0       3.9   4.7e+03     100     119 ..     231     250 ..     208     257 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.7e-05
      AAA_33  3 llvGlpGsGKstlaerllkklgavllssdt.........l 33
                ++ G+ G+GKs la  l+k+  +++++sd+         +
  KHJ31810.1 21 FVLGATGTGKSSLAVDLAKRFNGEIINSDAmqmyaglpiI 60
                688**************************95555555542 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 3.9
      AAA_33 100 rivvvetdeetlkeRlakRa 119
                 ++ ++ + +e+lk+Rl  R 
  KHJ31810.1 231 LLFWIYAEPEVLKKRLDDRV 250
                 46788899999999999885 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   1.5e-05     0.017       2      25 .]     411     434 ..     408     434 .. 0.97

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.5e-05
      zf-met   2 yCelCnvtfnsesqlksHlqGKkH 25 
                 +C+ C +t  +e  ++sHl++++H
  KHJ31810.1 411 TCDTCLITSMNEIEWDSHLRSRRH 434
                 5*********************** PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   1.8e-05     0.022       5      53 ..      24      72 ..      21     106 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.8e-05
                    -STTSSHHHHHHHHHHHHT-EEEEHHHHHHHHHHHHHHTT--TT-HHHH CS
  Cytidylate_kin  5 GPagsGKssvaralaeklglkyldtgalYRalalaalrrkvdlldeaal 53
                    G +g+GKss+a  la++++ +++++ a+     l ++ +k+   +e+ +
      KHJ31810.1 24 GATGTGKSSLAVDLAKRFNGEIINSDAMQMYAGLPIITNKITYEEEQGI 72
                    779*************************999999999999988888765 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   3.1e-05     0.037      23      56 ..      16      46 ..       9      89 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.1e-05
      AAA_16 23 rpelvllsGesGvGKsslvrellralekdggifl 56
                 ++ +++ G+ G+GKssl+  l+++++++    +
  KHJ31810.1 16 KEPTLFVLGATGTGKSSLAVDLAKRFNGE---II 46
                4589***************9999999887...34 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   4.5e-05     0.054       8      93 ..      14     104 ..       9     168 .. 0.78
   2 ?   -1.2   0.0       2.2   2.6e+03      11      39 ..     215     243 ..     209     333 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.5e-05
                 EETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGG.B-HHHCCHCEEEE-SS...--S-TTSBHHHH.....HHHTCHHHHHHHST CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx...xxxxxxxxxxxx.....xxxxxxxxxxxxxx RF
    ABC_tran   8 lkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlke.qeleslrkeigvlpqe...pqlfpeltvren.....esdeeiekalsklg 93 
                 + +  ++ ++G +G+GKS+L+  la+     +Gei ++++ +++   l++  ++i + +++   ++l  ++++ e+       ++e+++++++++
  KHJ31810.1  14 IPKEPTLFVLGATGTGKSSLAVDLAKRF---NGEI-INSDAMQMyAGLPIITNKITYEEEQgipHHLLGNVQLDEEpwrigVFQREAKNIMRQIR 104
                 66778899*************9999997...5999.89888888888999999999888887766677777666667777755555555555544 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 2.2
                 TSEEEEEESTTSSHHHHHHHHTTSS--SE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  11 gekvaivGenGaGKStLlkllagllkpte 39 
                 ++k+ ++Gen +  StLl  ++ + +  +
  KHJ31810.1 215 SSKIDFFGENISPESTLLFWIYAEPEVLK 243
                 56666677777777777766666654433 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   4.5e-05     0.054      23      54 ..       7      38 ..       5      41 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.5e-05
      AAA_25 23 rwlvkgllpagelallaGapgtGKttlaldla 54
                +w +   +p++ +  + Ga+gtGK+ la+dla
  KHJ31810.1  7 NWSMASRIPKEPTLFVLGATGTGKSSLAVDLA 38
                68889999**********************98 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00014      0.16       2      36 ..      21      55 ..      20      66 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00014
  RNA_helicase  2 wlyGpsgeGKStlakeLakallkklklkkkdsvys 36
                  ++ G++g+GKS+la +Lak++ +++ +  + ++y+
    KHJ31810.1 21 FVLGATGTGKSSLAVDLAKRFNGEIINSDAMQMYA 55
                  789*******************9996666666665 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00021      0.25       2      26 ..      20      44 ..      19      58 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00021
                EEEE--SSSSHHHHHHHGGGGBS-- CS
       AAA_5  2 vlLvGppGtgKselaerlaaalnre 26
                ++++G++GtgKs+la  la+++n e
  KHJ31810.1 20 LFVLGATGTGKSSLAVDLAKRFNGE 44
                789******************9765 PP

>> PPV_E1_C  Papillomavirus helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00012      0.15     258     292 ..      13      47 ..       7      57 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00012
    PPV_E1_C 258 gvPkknclvllGppntGkslfamslikfLkGkvls 292
                  +Pk  +l +lG++ tGks +a+ l k ++G++++
  KHJ31810.1  13 RIPKEPTLFVLGATGTGKSSLAVDLAKRFNGEIIN 47 
                 68******************************996 PP

>> B12-binding  B12 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00033       0.4      67      94 ..      95     121 ..      92     137 .. 0.73
   2 ?   -1.8   0.0       2.5     3e+03       4      26 ..     358     380 ..     356     383 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00033
  B12-binding  67 avkelvellkrirprvkvvvGGahpsld 94 
                  ++k++++++++ r rv++vvGG+h  + 
   KHJ31810.1  95 EAKNIMRQIRA-RGRVPIVVGGTHYYIQ 121
                  57889999855.588*********5444 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2.5
  B12-binding   4 llatvggdlhplGlavlaaalrd 26 
                  ++ +++ d+ ++++++ a++l +
   KHJ31810.1 358 NISKFKEDVTDIAIKITADFLAN 380
                  56789999999999999999876 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00026      0.31       3      35 ..      22      54 ..      20     113 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00026
                EESSTTSSHHHHHHHHHHHHTHEEEEEETTTCS CS
         AAA  3 lyGppGtGKTllakavakelgvefleisgsell 35
                + G  GtGK++la  +ak ++ e+++ +++++ 
  KHJ31810.1 22 VLGATGTGKSSLAVDLAKRFNGEIINSDAMQMY 54
                7899*****************999999988776 PP

>> zf-3CxxC  Zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       2.4   2.9e+03      54      95 ..     172     213 ..     165     218 .. 0.61
   2 ?   10.6   0.0   0.00052      0.62      38      78 ..     404     446 ..     387     461 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 2.4
    zf-3CxxC  54 epkldeeevekvlrnlvkkiekkfykekrkkPykvHerelCe 95 
                   +++++ ++k++r l+  +e+    ++    ++  + ++C+
  KHJ31810.1 172 AERWHPNDTRKIMRSLKIFLETGERASDLYARQQEYRDKNCQ 213
                 567899999999999998555444333222222235555555 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00052
    zf-3CxxC  38 kvrlfgQrCkkC..kkleepkldeeevekvlrnlvkkiekkfy 78 
                   ++f+Q C +C  ++++e+++d++  ++  r lvkk  kk+ 
  KHJ31810.1 404 PNVWFRQTCDTCliTSMNEIEWDSHLRSRRHRALVKKRLKKME 446
                 4679*******************99888888888886555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        81  (0.00451782); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3289.19
//
Query:       KHJ31811.1  [L=105]
Description: putative transcriptional elongation regulator (elongin c) [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-12   45.4   0.0    8.8e-12   45.0   0.0    1.2  1  Skp1_POZ  Skp1 family, tetramerisation domain


Domain annotation for each model (and alignments):
>> Skp1_POZ  Skp1 family, tetramerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.0   4.9e-16   8.8e-12       2      63 .]      14      76 ..      13      76 .. 0.95

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 4.9e-16
                EEEEEETTSCEEEEEHHHHTTSHHHHHHHHCTCCCGT.TCEEETTS-HHHHHHHHHHHHHCHH CS
    Skp1_POZ  2 sivLqSsDgesfeveeavakkSktikhmiedlgdddk.priplpnvtskiLekvieYckhhkk 63
                 ++L+SsDg +f v +++a+ S +ik+m++++ ++   +r + +++++ iLekv eY ++++k
  KHJ31811.1 14 YVTLVSSDGFEFVVLREAACVSGMIKAMLAGDYQEAIkGRCEFKEINGIILEKVAEYFYYNHK 76
                589****************************99998679*********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       284  (0.0158403); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.24s 00:00:00.59 Elapsed: 00:00:00.39
# Mc/sec: 812.49
//
Query:       KHJ31812.1  [L=254]
Description: hypothetical protein EV44_g6207 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       885  (0.0493614); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1904.50
//
Query:       KHJ31813.1  [L=171]
Description: putative inner centromere protein mis6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-16   59.4   0.1      3e-16   59.2   0.1    1.0  1  CENP-I    Mis6


Domain annotation for each model (and alignments):
>> CENP-I  Mis6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.1   1.7e-20     3e-16      64     215 ..      16     170 ..       2     171 .] 0.88

  Alignments for each domain:
  == domain 1  score: 59.2 bits;  conditional E-value: 1.7e-20
      CENP-I  64 lryfekvqkkvslkknevlekhlktvenvalkkGlapeaidillnv.alsGkfadavntrllkclipatvisedsvvkavswlc..vgkcsgnikvlfl 159
                 l  +e++ +k ++k+ + +   ++ +++ ++++Gl+   +d l+++ +l  ++ ++    l++ l p   is++   + v+ l   ++k   +++ ++l
  KHJ31813.1  16 LADLEQAAQKPAKKRLTKVSIVIDKINSKSYQNGLSALDLDKLIDIiILPNQLDQSSRINLIRNLYPIDKISKSVFFRVVASLGhgITKAPYSTQAMLL 114
                 556677777777777777778889999******************7258899**********************999999988533889999******* PP

      CENP-I 160 rwliamfdfidhkeqvnslyGfffaflqddklcpyvchllylltrkenvkpfrvrk 215
                 +wli   d +++      +y ++f  l+  ++   +chll ++tr++ v+pfr++ 
  KHJ31813.1 115 KWLIMTHDTVEDPTVFSQVYSILFNLLDTAAIRSQLCHLLSIITRRKHVRPFRIQL 170
                 *****************************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1307.63
//
Query:       KHJ31814.1  [L=376]
Description: hypothetical protein EV44_g1960 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-27   96.8   0.1    2.2e-27   96.0   0.1    1.4  1  RVT_1        Reverse transcriptase (RNA-dependent DNA polymer
    7.3e-11   42.0   0.2    1.6e-10   40.9   0.2    1.6  1  RT_RNaseH_2  RNase H-like domain found in reverse transcripta


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.0   0.1   2.5e-31   2.2e-27      14     222 .]     105     257 ..      98     257 .. 0.98

  Alignments for each domain:
  == domain 1  score: 96.0 bits;  conditional E-value: 2.5e-31
                 ....-THHHHCTB--.........-------HHHH.............HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET.............. CS
       RVT_1  14 llsvdykalnkliakrLkdvlekllsenqpgfrpgrstldavedllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvptklinliksflstr 112
                 +++vdy+aln++++k           +++p + +              l++  +ak++++lD  + F++++++  ++++ af+++              
  KHJ31814.1 105 CMCVDYRALNNITVK---------NRYPIPLISET-------------LDRLSNAKYFTTLDAISTFNRIRMKPGDEEKSAFNTR-------------- 167
                 7899***********.........***********.............999**********************************.............. PP

                 ...........TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHHHHHHHHHHHHHHHHTT--BEGGG-EEE..... CS
       RVT_1 113 sfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskeelqelleaveewlkesglkinpeKtklvlftvk 211
                            +g++e+ ++p+G+ ++P+ f+ ++n+ ++++      v+ ++Y DDili+s+s +++  ++++v +++++++l++  +K+ ++     
  KHJ31814.1 168 -----------YGQFEYLVMPFGLCNAPSSFQSLINDTIHDYLD----VFATAYLDDILIYSESLDDHIPHVRKVLQRMRDNNLQLDIHKCNFM----- 246
                 ...........9*******************************8....9*********************************************..... PP

                 ESSEEETTEEE CS
       RVT_1 212 seevkyLGvtl 222
                 +++vkyLG+t+
  KHJ31814.1 247 TNKVKYLGLTI 257
                 9********97 PP

>> RT_RNaseH_2  RNase H-like domain found in reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   0.2   1.8e-14   1.6e-10       1      44 [.     328     371 ..     328     373 .. 0.97

  Alignments for each domain:
  == domain 1  score: 40.9 bits;  conditional E-value: 1.8e-14
  RT_RNaseH_2   1 WteeqekafeklkealtsapvLahpdpdkpfiletDaSdtgiga 44 
                  W+++++k+f++lk a+t+ap+L+h+++ +++ +etDaSd+  +a
   KHJ31814.1 328 WNDQCQKSFDNLKMAFTTAPILTHFQHGRETWVETDASDYVTAA 371
                  ****************************************9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 3033.80
//
Query:       KHJ31815.1  [L=562]
Description: hypothetical protein EV44_g5466 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        1.3    9.3   0.0        1.3    9.3   0.0    3.6  4  Tup_N     Tup N-terminal


Domain annotation for each model (and alignments):
>> Tup_N  Tup N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1      0.26   4.6e+03      45      63 ..      76      94 ..      50     107 .. 0.67
   2 ?    9.3   0.0   7.5e-05       1.3      31      74 ..     154     203 ..     145     206 .. 0.82
   3 ?   -3.0   0.0      0.54   9.7e+03      63      73 ..     402     412 ..     385     414 .. 0.57
   4 ?   -3.1   0.2      0.57     1e+04      43      62 ..     506     525 ..     505     526 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.26
       Tup_N 45 rqtlyeLeeahrkikqqYE 63
                rqtl  L+ + ++ +++++
  KHJ31815.1 76 RQTLLSLNHTISNKRDEFQ 94
                5666666666655555554 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 7.5e-05
       Tup_N  31 elkiqsqiqElqqirqtlyeLeea......hrkikqqYEeeiarLkaeLe 74 
                 +l+i sq +E++++r++  eL +        ++ +++Y +ei rL++e++
  KHJ31815.1 154 DLHIGSQDNEVDNLRSSNEELSSGsypnplTNDKRTKYSNEILRLRKEID 203
                 67899999999999999999987522222258899*************97 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 0.54
       Tup_N  63 EeeiarLkaeL 73 
                 E+ i +Lk++L
  KHJ31815.1 402 EDKIDELKSRL 412
                 55566666665 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 0.57
       Tup_N  43 qirqtlyeLeeahrkikqqY 62 
                  i+q l + ++ hr +++ Y
  KHJ31815.1 506 VIKQRLQDEKRCHRYMQKGY 525
                 58999999999999998888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (562 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       659  (0.0367561); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 4080.66
//
Query:       KHJ31816.1  [L=396]
Description: putative centromere microtubule binding protein cbf5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.4e-34  115.4   0.3      3e-32  110.5   0.3    2.5  2  DKCLD     DKCLD (NUC011) domain
    4.6e-24   85.5   0.3      6e-21   75.4   0.3    3.2  1  TruB_N    TruB family pseudouridylate synthase (N terminal do
    1.9e-23   82.4   1.2    3.5e-23   81.5   1.2    1.5  1  TruB_C_2  tRNA pseudouridylate synthase B C-terminal domain
    1.8e-21   75.9   1.4      3e-21   75.2   1.4    1.4  1  PUA       PUA domain
     0.0013   19.0   0.0     0.0034   17.6   0.0    1.7  1  UPF0113   UPF0113 PUA domain


Domain annotation for each model (and alignments):
>> DKCLD  DKCLD (NUC011) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.5   0.3   8.2e-36     3e-32       1      58 []      25      82 ..      25      82 .. 0.98
   2 ?    2.2   0.0     0.054   1.9e+02       4      28 ..     266     290 ..     264     292 .. 0.88

  Alignments for each domain:
  == domain 1  score: 110.5 bits;  conditional E-value: 8.2e-36
                XXXXX....XXX-EEESS-----TTSS--GGG--HHHHHHTEEEEEEE-SSS-HHHHH CS
       DKCLD  1 tsewpllLknydkllvrtehytplpaGssPlkRpieeyikyGvinLDKPsnPsSHEVV 58
                ts+wpllLkny+kl+vrt+h+tp+p+G++PlkR+i++yi++GvinLDKPsnPsSHEVV
  KHJ31816.1 25 TSDWPLLLKNYSKLIVRTGHFTPIPHGCTPLKRDIKSYISSGVINLDKPSNPSSHEVV 82
                689******************************************************9 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.054
                 XX....XXX-EEESS-----TTSS- CS
       DKCLD   4 wpllLknydkllvrtehytplpaGs 28 
                 ++ lL++y++++v+ ++ + + +G 
  KHJ31816.1 266 LETLLTTYKRIVVKDSAVNAVCYGA 290
                 6789************999999986 PP

>> TruB_N  TruB family pseudouridylate synthase (N terminal domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.4   0.3   1.7e-24     6e-21       1     149 []      86     203 ..      86     203 .. 0.95

  Alignments for each domain:
  == domain 1  score: 75.4 bits;  conditional E-value: 1.7e-24
                 HHHTT-S-EEESS---TT-EEEEEEEEGGGGGGHHHCTTS-EEEEEEEEETEEETTSBTTS-EEE-.--TT--HHHHHHHHHHC-EEE----------- CS
      TruB_N   1 krllkakkvGhtGtLDplatGvLvvavgeaTklleylleadKeYeatirlgaetdteDaegeileeekveklteekleevlkkftGeieqvppmySAvk 99 
                 kr+l+++k Gh+GtLDp++tG+L+v++++aT+l+++ + a KeY+++irl+ +    +                +++ ++l+++tG++ q+pp +SAvk
  KHJ31816.1  86 KRMLRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQGAGKEYVCVIRLHDKLPGGE----------------AQFARALETLTGALFQRPPLISAVK 168
                 89************************************************99988776................46899******************** PP

                 ----------------------EEEEEEEEEEEEEE..EEEEEEEESTTTTH CS
      TruB_N 100 vnGkrlyelaregeeverkkrkvtiyelelleveep..evelevecskGtYi 149
                                  r+ r  ti+e +l e++++   + + v+c++GtYi
  KHJ31816.1 169 -----------------RQLRIRTIHESKLYEFDNErhLAVFWVSCEAGTYI 203
                 .................999*************98877899**********8 PP

>> TruB_C_2  tRNA pseudouridylate synthase B C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.5   1.2   9.8e-27   3.5e-23       1      63 [.     204     270 ..     204     271 .. 0.95

  Alignments for each domain:
  == domain 1  score: 81.5 bits;  conditional E-value: 9.8e-27
                 HHHHHHHHHHTTS-EEEEEEEEEEETTE.GG-..B-HHHHHHHHHHHHT..--H.HHHHEEEGGGGG CS
    TruB_C_2   1 RtLcdDiGeaLgcgAhveeLRRtrvgpf.deedmvtledLedavllyke..dee.LdrlllPlesal 63 
                 RtLc ++G++Lg+gAh++eLRR+r+g++ ++e+mvtl+d+ da+++ ++  de+ L++++ Ple++l
  KHJ31816.1 204 RTLCVHLGLLLGVGAHMQELRRVRSGAMdEQENMVTLHDVLDAQWMQDNtrDESyLRKVIAPLETLL 270
                 9***************************98899************999997777***********98 PP

>> PUA  PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2   1.4   8.3e-25     3e-21       1      73 [.     274     346 ..     274     347 .. 0.98

  Alignments for each domain:
  == domain 1  score: 75.2 bits;  conditional E-value: 8.3e-25
                 CEEEE-HHHHHHHHTT-EEEGGGEEEEETT--TTSEEEEEETTSCEEEEEEESS-HHHHHHHCTSEEEEEEEE CS
         PUA   1 grvvvddgAvkallsgasLlapGvvevegdfeegdvVaivdedgelvavGlanysseelakikggksveierv 73 
                 +r+vv+d+Av+a+++ga+L++pG++++e  +e  ++V++++++ge++a+G+a++s+ el ++++g++++++r+
  KHJ31816.1 274 KRIVVKDSAVNAVCYGAKLMIPGLLRYEAGIEVHEEVVLMTTKGEAIALGIAQMSTVELSTCDHGVVAKVKRC 346
                 69********************************************************************997 PP

>> UPF0113  UPF0113 PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   9.4e-07    0.0034       2      56 ..     276     331 ..     275     348 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 9.4e-07
     UPF0113   2 vvvkekaeklFLYGrdvlkesilkitesvkenqvvvVlnengeplGiGkirkdt.k 56 
                 +vvk +a + + YG +++  ++l+++ +++ ++ vv++ ++ge++++G+++ +t +
  KHJ31816.1 276 IVVKDSAVNAVCYGAKLMIPGLLRYEAGIEVHEEVVLMTTKGEAIALGIAQMSTvE 331
                 79************************************************998863 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 3148.78
//
Query:       KHJ31817.1  [L=1257]
Description: putative leucine permease transcriptional regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.7e-89  299.0   0.1    3.7e-89  299.0   0.1    1.7  2  SAC3_GANP        SAC3/GANP family
    1.5e-05   25.0   0.2    3.7e-05   23.7   0.2    1.6  1  CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family


Domain annotation for each model (and alignments):
>> SAC3_GANP  SAC3/GANP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  299.0   0.1   4.1e-93   3.7e-89       1     292 [.     253     576 ..     253     577 .. 0.94
   2 ?   -3.6   0.2      0.65   5.8e+03      14      31 ..    1024    1041 ..    1022    1059 .. 0.76

  Alignments for each domain:
  == domain 1  score: 299.0 bits;  conditional E-value: 4.1e-93
                 XXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----HHHHHHHHHHHHHHTG..G..GTTTCHHHHHHHHH CS
   SAC3_GANP   1 GtCedmCPekEraeRevqkdlsrfEk....ekkktkkvdpskaVKeysRsaagqeeplpsdlRppevLkkTldYLlkeildreeeelaevydFiwDRtR 95 
                 GtC++mCP++E   R+v+++ ++ E+    + +   ++  +k+VK+ +Rsaagq++plp d+R++++L++T+dYL+++il   e+el++v+ F+wDRtR
  KHJ31817.1 253 GTCDQMCPDYECLARIVEGRHDKTERdiepDGSLAAQPRLDKMVKALARSAAGQDAPLPCDIRTTAALRRTVDYLFNNIL--AERELESVHGFLWDRTR 349
                 9*************************7644333344455559**************************************..5569************* PP

                 HHHHHHHHTT--SHH....HHHHHHHHHHHHHHHHHHHHHTTS...---CHHHHHHHHHHHHHHHHHHHHHH...---TTHHHHHHHHHHHTTT-HHHH CS
   SAC3_GANP  96 aiRqDltiqnlskae....aveilerivrfhilslhrlceepes..sfdeqqnleqLqkclqsLlelYddlrkkkeelpneaefrayylLlnlrdpdil 188
                 aiR+D++++++ +++    ++++leri+rfh++slh++++  +s   f+ qq++eqL+++l sL+++Ydd++k++++++ne ef+ayy+++n + p il
  KHJ31817.1 350 AIRRDFVFHSFVTPTelldQIYCLERIIRFHAISLHYMSKDGISteGFSDQQEREQLSRSLLSLIHAYDDCEKQGINCENEIEFKAYYIIFNGEIPGIL 448
                 *************999999**********************99999**************************999************************ PP

                 HHHCTS-HHHH.TSHHHHHHHHHHHHH--TT..................HHHHHHHHT..TS-HHHHHHHGGGHHHHHHHHHHHHHHHS...-TT---E CS
   SAC3_GANP 189 revqelpseil.kspevqlalklvaalqenn..................yvrffklvk..evsylqacllerhfnevRrkalkalsray...kskskkv 263
                 ++vq++  +++ +s+ ++ a+ l++ lq+ +                  y+rff++v+  ++sy++ac++e++fn++R+ +l+++  +y   + ++k++
  KHJ31817.1 449 ETVQNWGFDLWeNSEIIRNAVCLSESLQNIWdfhgplnpvstmelsqnaYSRFFSIVEdpSTSYTMACFAEIYFNKIRKAILRTILISYkkqRVQTKDW 547
                 ******665551677899***********************************************************************98878899** PP

                 EHHHHHHHTT-SSHHHHHHHHHHTT--EE CS
   SAC3_GANP 264 pleeLaelLlfddeeeaeefceayglevs 292
                 ++e+L+++L fdd++e+e f+e ygl+++
  KHJ31817.1 548 TAEKLNTYLRFDDQNEVEPFVELYGLHFT 576
                 **************************987 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.65
                  XXXXXXXXXXXXXXXXXX CS
   SAC3_GANP   14 eRevqkdlsrfEkekkkt 31  
                  +R +q+d+ ++E +++++
  KHJ31817.1 1024 QRRRQRDVTSIEACDQNN 1041
                  899*********855543 PP

>> CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.2   4.1e-09   3.7e-05      51     124 ..     493     573 ..     473     590 .. 0.90

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 4.1e-09
  CSN8_PSD8_EIF3K  51 LeeanyakfwstlksddlsadltadvagleelvReeiaklvgkaY.......esIsadvlaelLglssdeelekfvkevgW 124
                      L++++y +f+s+++  + s ++  + + + +++R+ i++ +  +Y       +  +a++l  +L +++++e+e fv+ +g 
       KHJ31817.1 493 LSQNAYSRFFSIVEDPSTSYTMACFAEIYFNKIRKAILRTILISYkkqrvqtKDWTAEKLNTYLRFDDQNEVEPFVELYGL 573
                      89*********99987777788889999*****************999999989999**********999***99987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       990  (0.0552178); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.77u 0.24s 00:00:01.01 Elapsed: 00:00:00.39
# Mc/sec: 9664.19
//
Query:       KHJ31818.1  [L=446]
Description: putative glycoside hydrolase family 16 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-42  144.6   4.1      2e-42  144.6   4.1    1.6  2  Glyco_hydro_16  Glycosyl hydrolases family 16
  ------ inclusion threshold ------
       0.98   10.0  14.9        2.1    8.9  14.9    1.5  1  Chitin_bind_1   Chitin recognition protein


Domain annotation for each model (and alignments):
>> Glyco_hydro_16  Glycosyl hydrolases family 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.6   4.1   2.3e-46     2e-42       4     176 ..      94     265 ..      91     266 .. 0.92
   2 ?   -3.2   0.3      0.55   4.9e+03      19      44 ..     286     312 ..     270     316 .. 0.53

  Alignments for each domain:
  == domain 1  score: 144.6 bits;  conditional E-value: 2.3e-46
                     TB-SEE-GGGEEEETTSEEEEEEEEEE.EEEEEECCEESSEEEEEEEE---STTEEEEEEEETGGTSTTEEEEEEEETT-TTEEEEEEEBTTBSG CS
  Glyco_hydro_16   4 efevtwsksavsvengetltltldkes.gsrikskksflyGkvearikaaksaGvvtafylssedekahdEiDiEflGndtgkvqtnvygkGkgk 97 
                      +++++s++ v ++ + ++ lt+   + g+ + s+ +++yG+v+a+ k++++ Gv+taf+l s   + +dEiD+Ef+G d  ++qtn+y+ G ++
      KHJ31818.1  94 TADWVSSGEPVYYN-N-NVLLTMAPDTvGTLLASTTYMWYGNVKAKFKTSRGPGVITAFILLS---DVKDEIDYEFVGADLVTAQTNYYSMGITN 183
                     57889999999775.4.69999999888*********************************99...9**************************** PP

                     E.EEEEETSS-TTTS-EEEEEEEETTEEEEEETTEEEEEEESSHHH.HT.....--EESEEEEEEEEEEBSHHHSSE-EEEEEEE CS
  Glyco_hydro_16  98 r.ekrlslwfdptedfHtYaieWtpdkikfyVDgkpvrtltkkeae.ev....kyPqftpmkvavslwpgsdwateqgkvkidwa 176
                     + ++++ + +++ +++HtY+i+Wtpd+i++ +Dgk+ rt ++ +++ ++    +yPq tp +v++slwpg+  ++ +g  +i+wa
      KHJ31818.1 184 YhNSENITLSNTFSNYHTYEIDWTPDEITWKIDGKVGRTKKRVDTWnATanqwAYPQ-TPARVQLSLWPGGLPTNGKG--TIEWA 265
                     7777777789***********************************9655886668**.******************99..****8 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.55
                     TSEEEEEEEEEE.EEEEEECCEESSEE CS
  Glyco_hydro_16  19 getltltldkes.gsrikskksflyGk 44 
                      e++++t  +++ g++ +  ks++y+ 
      KHJ31818.1 286 FESVEMTCYNSNsGPGTRKGKSYTYSS 312
                     245666666544366666677777765 PP

>> Chitin_bind_1  Chitin recognition protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9  14.9   0.00023       2.1       8      34 ..      25      51 ..      21      53 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00023
                   T---STT-.EE-TTSBEEBSHHHHSTT- CS
  Chitin_bind_1  8 gatCplnv.CCSqyGyCGttsdyCgagC 34
                     +Cp+++ CCSqyG CG++ ++C  gC
     KHJ31818.1 25 SNQCPQSTpCCSQYGECGVG-AFCLGGC 51
                   479*99888*********97.79*7789 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 3310.62
//
Query:       KHJ31819.1  [L=737]
Description: putative protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-54  184.5   0.1      9e-34  117.0   0.0    2.4  2  Pkinase         Protein kinase domain
    2.9e-35  121.8   0.0    1.9e-34  119.1   0.0    2.1  1  Pkinase_Tyr     Protein tyrosine kinase
    0.00017   21.0   0.0    0.00038   19.9   0.0    1.5  1  Kinase-like     Kinase-like
  ------ inclusion threshold ------
       0.08   13.1   0.8       0.38   11.0   0.8    2.1  1  DUF3896         Protein of unknown function (DUF3896)


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.8   0.3   1.8e-21   7.9e-18       1     115 [.       9     129 ..       9     132 .. 0.93
   2 !  117.0   0.0     2e-37     9e-34     119     261 ..     159     289 ..     155     292 .. 0.88

  Alignments for each domain:
  == domain 1  score: 64.8 bits;  conditional E-value: 1.8e-21
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEE..EEEESSEEEEEEE--TTEBHHHHHH....HHS CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlye..vfeekdelylvleyveggeladlle....rkg 93 
                 +e+lek+G+GsfG++ k+++k++g+  + K+i+  k+++k+++++ +E +il +l+hpniv +++   ++++++l+l +ey+ +g+l ++++    ++ 
  KHJ31819.1   9 FEVLEKIGHGSFGVIRKVRRKQDGQVLCRKEISYLKMSQKEKEQLNAEFAILSSLRHPNIVGYFHreHLKSSQDLHLYMEYCGNGDLGKVIRnlilKNE 107
                 6889**********************************************************98522677899**************999998887888 PP

                 S--HHHHHHHHHHHHHHHHHHH CS
     Pkinase  94 slseeeakkiakqilegleylH 115
                   +e+ + +i++q++++l  +H
  KHJ31819.1 108 YAEESFVWSIFAQLVTALYRCH 129
                 88888999*************9 PP

  == domain 2  score: 117.0 bits;  conditional E-value: 2e-37
                 EE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHH CS
     Pkinase 119 iiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekil 217
                 i+HrDlKpeN+++ e++ +K++DFGl+k ++s+  ++++vgt+ Y++PE+  +++y+ k+D+W+lG+i+yel +++ppf+++++           + i+
  KHJ31819.1 159 ILHRDLKPENVFLGEDNFVKLGDFGLSKIMKSHDFASTYVGTPFYMSPEICAAERYTLKSDIWALGCIIYELCSREPPFNAKTHF----------QLIQ 247
                 99******************************************************************************33322..........2333 PP

                 HHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTS CS
     Pkinase 218 kilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqh 261
                 ki   + + +p ++  s+++k++++++l ++p +R+  + ll+ 
  KHJ31819.1 248 KIK--EGKVSPLPNIYSNDLKRVINSCLIVNPDRRPDTAALLKI 289
                 443..23567888888********************99988875 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.1   0.0   4.3e-38   1.9e-34       2     256 ..      10     287 ..       9     289 .. 0.87

  Alignments for each domain:
  == domain 1  score: 119.1 bits;  conditional E-value: 4.3e-38
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHHHHHHT.. CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvct..keepllivteyvkgGdLlkfLrkk.. 95 
                  e+ +k+G+G+fG + + + k ++ +  ++  +  l  +++++eke+l  e +i+++l+hpniv +       +++ l + +ey+ +GdL k +r+   
   KHJ31819.1  10 EVLEKIGHGSFGVIRKVRRK-QDGQVLCRKEISYL--KMSQKEKEQLNAEFAILSSLRHPNIVGYFHREHlkSSQDLHLYMEYCGNGDLGKVIRNLil 104
                  5679************9999.33333333344444..556667899*****************9988766557888******************99** PP

                  ..........................CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTS CS
  Pkinase_Tyr  96 ..........................ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeakl 167
                                              ++ + +  l    + Ak         ++Hrdl   Nv+l e+++vk++DfGL++ ++++d    +++   
   KHJ31819.1 105 kneyaeesfvwsifaqlvtalyrchyGVDPPEPECNLLGLKNSAKSKPPTGGVMILHRDLKPENVFLGEDNFVKLGDFGLSKIMKSHDF---ASTYVG 199
                  ************************9955666666667778899999999999******************************9933333...334445 PP

                  GGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 168 pvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselv 256
                     +m+pE+  ++++t ksD+W+ G +++E+++  e p++  ++ ++++k+kegk  + p+  +++l++++++c+  +p++Rp+ ++l+
   KHJ31819.1 200 TPFYMSPEICAAERYTLKSDIWALGCIIYELCS-REPPFNAKTHFQLIQKIKEGKVSPLPNIYSNDLKRVINSCLIVNPDRRPDTAALL 287
                  567******************************.899**********************************************988876 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   8.4e-08   0.00038     165     255 ..     159     242 ..     156     272 .. 0.80

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 8.4e-08
  Kinase-like 165 lvhgkftvdnllldekgglmlggftaLvragtkvvlseve...kgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPltlate 255
                  ++h +++++n++l e+  ++lg+f+ L +  ++   +++      +  pE++++          ++t k d W+lG  iy + +++ P++ +t 
   KHJ31819.1 159 ILHRDLKPENVFLGEDNFVKLGDFG-LSKIMKSHDFASTYvgtPFYMSPEICAA---------ERYTLKSDIWALGCIIYELCSREPPFNAKTH 242
                  78**********************8.5555555554444423345899****99.........46899********************998765 PP

>> DUF3896  Protein of unknown function (DUF3896)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.8   8.4e-05      0.38      18      41 ..      32      56 ..      24      62 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 8.4e-05
     DUF3896 18 kqqlCkk.lssltlskkereqlkle 41
                 q lC+k +s l++s+ke+eql  e
  KHJ31819.1 32 GQVLCRKeISYLKMSQKEKEQLNAE 56
                488**886899***********988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (737 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1097  (0.0611858); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.69u 0.26s 00:00:00.95 Elapsed: 00:00:00.42
# Mc/sec: 5232.88
//
Query:       KHJ31820.1  [L=494]
Description: putative rab geranylgeranyl transferase escort protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-23   80.9   0.0    1.6e-22   79.7   0.0    1.5  1  GDI       GDP dissociation inhibitor


Domain annotation for each model (and alignments):
>> GDI  GDP dissociation inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.7   0.0   8.7e-27   1.6e-22       4     370 ..       8     407 ..       5     418 .. 0.76

  Alignments for each domain:
  == domain 1  score: 79.7 bits;  conditional E-value: 8.7e-27
                 EECEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSSCGGG-EE-HHHH..H.HHH-TT..........HHHH.....HHH--GGG--EESS--BEETTS CS
         GDI   4 eydvivlGtGlkecilsGllsvdgkkvlhldrndyyGgesasltleql..y.erfkle..........ekpe.....eklGkdrdwnvdlipkfllanG 84 
                  +dv++ Gt ++  +ls  ls ++kk+lh+d n+yyGg  a+l+le++  + +++k +          +kp+      +l  +r +n+ l+p  + +n 
  KHJ31820.1   8 TWDVLISGTDIQRSLLSLALSRSKKKILHVDANPYYGGINAALSLEEVdeWaAKHKGTgndifqnaqiQKPStsddiARLSPSRSYNLTLLPFIIHSNS 106
                 68******************************************99873321233322333443334423321222257999***************** PP

                 HHHHHHHHTTGGGCS-EEE-SEEEEEE....TCEEEE--SSHHHHHC-TTS-HHHHHHHHHHHHHHHH-BTTBGGGSTT--TTTSBHHHHHHHCT--HH CS
         GDI  85 elvkiliktdvtrylefkaveGsyvyk....egkiakvpanelealaspllglfekrrakkfleyvseyeeddpktyedldlkkatmkevykkfdlsed 179
                 +l   li ++  r lef+av   +++     ++ ++k+p    + ++ + +    kr + kfl +v +y+ ++p+ ++ +  k    + + ++f ls +
  KHJ31820.1 107 KLLSKLISSNAYRQLEFQAVGNWWILDsfqgRETLKKIPNCREDIFQDSTIDNRSKRNLMKFLRFVIDYK-NQPDLWKSFSEKP-LNEFLSAQFSLSVN 203
                 **********************9998877666789**********************************8.6799****98654.4567889******* PP

                 HHHHH.HHHTS--SSSGGGGSBCHHHHHHHHHHHHHHCCCSS.-SEEEETT-TT.HHHHHHHHHHHHTT-EEETS--ECEE.EE-TTS-EEEEEE.TTE CS
         GDI 180 tkdfi.Ghalalyrdddylkqpaletleriklyaeslarygk.spylyplyGlG.elpqgfarlsaiyGGtymlnkpvdev.vldedgkvvGvks.eee 273
                  ++ i G +l+l + +  l+  +  +l ri+ + +s+   g     +   +G G e+ q  +r  a+ G  y+l + +++    +e++ ++ +k  ++ 
  KHJ31820.1 204 LQEAIaGLTLTLLTPN--LTT-VSWALPRIHRHLSSIGVLGSgFGAVISKWGCGaEICQIACRSGAVGGCVYILGTGIEKQnQANENSELLKIKLtNGV 299
                 9997736777777665..443.4456789999999999998535678999999878********************998761567789999**973566 PP

                 EEEECEEEE-GG.G-CCCEEEEEEEEEEE.EEESS--TTSTT-...SSEEE.EE-GGGCTSSS-E......EEEEEEGGGTSS-TT-EEEEEEEE--SS CS
         GDI 274 vakakkvicdps.ylpekvrkvgkvirai.cilshpipntdda...dsvqi.iipqkqlgrksdi......yvalvssahnvaakgkylaivsttvete 360
                 v++++++ + p   ++ +  +++++i +  + +++ i+   +     +v i + p   l+ +s+i      y+++ ss  + +++g+y+ i +ttv +e
  KHJ31820.1 300 VIETRHLAAIPDeSIKANSLSISRLISIStSTFNNMIKTNTEGgpmPAVFIvVFPPGSLNDRSEIsnqypvYLMVHSSDTGECPEGQYV-IHATTVTSE 397
                 778888877775135666677888887651456777764333312235555145877777766644444449999*************8.566777777 PP

                 -HHHHTHHHH CS
         GDI 361 npevelepal 370
                 + +  le +l
  KHJ31820.1 398 KSKDILETSL 407
                 6666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3538.37
//
Query:       KHJ31821.1  [L=419]
Description: putative c6 transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.7e-09   37.0   9.3    4.5e-09   36.3   9.3    1.3  1  Zn_clus         Fungal Zn(2)-Cys(6) binuclear cluster domain
    0.00011   21.2   0.2    0.00025   20.0   0.1    1.6  2  Fungal_trans_2  Fungal specific transcription factor domain
  ------ inclusion threshold ------
       0.67    9.9   5.9       0.13   12.2   2.4    1.5  2  FAM217          FAM217 family


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   9.3   7.6e-13   4.5e-09       1      35 [.      41      74 ..      41      77 .. 0.94

  Alignments for each domain:
  == domain 1  score: 36.3 bits;  conditional E-value: 7.6e-13
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCT CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfyse 35
                ++C++Cr ++vKC++ +P+C+nC +++++C+ y++
  KHJ31821.1 41 TGCQRCRARRVKCSETHPVCTNCSRHGVDCV-YDR 74
                58*****************************.876 PP

>> Fungal_trans_2  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.1   4.2e-08   0.00025       1      71 [.     133     205 ..     133     213 .. 0.87
   2 ?   -3.2   0.0      0.46   2.7e+03      58      74 ..     308     331 ..     281     353 .. 0.64

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 4.2e-08
  Fungal_trans_2   1 elldyyldnvap.llspvpes.snpfrkvllplalsnkallhallalsafhlqskgpkds.lereakrykslal 71 
                     +ll+ y++n++  lls+ + s    ++  +  +al+ ++llh + ++s+++l  + p+d  l r+a+ ++  a 
      KHJ31821.1 133 RLLHNYIENTCHgLLSCNDLSvYRTWQFDIPRMALKQESLLHGIFSISSLQLLRLTPDDLdL-RKAQEFYFSAA 205
                     599******************99999999999*************************99954.55555555444 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.46
  Fungal_trans_2  58 s.......lereakrykslalkel 74 
                             ++ ea+r ++++l+++
      KHJ31821.1 308 AldrheemWDLEAQRAYERTLSYI 331
                     222223335666666666666654 PP

>> FAM217  FAM217 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.4   2.1e-05      0.13     133     210 ..      24     109 ..       6     128 .. 0.76
   2 ?   -3.0   0.1      0.97   5.8e+03      90     103 ..     405     418 ..     403     418 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.1e-05
      FAM217 133 kllqsalpskklssqeglsksqvsrkknleceeahpsc.........yayetssrlsellessrlckqkqsssesrvrseekkkkss 210
                 ++++ + + ++l ++++ + +q  r + ++c e+hp+c         ++y++  rl+++  +s + + ++ +++sr+r+e+ ++ + 
  KHJ31821.1  24 RAVA-KNKFPRLYHNKSRTGCQRCRARRVKCSETHPVCtncsrhgvdCVYDRGVRLANQSINSSSKSSQRRANNSRLRTENSQTYNL 109
                 4554.4446778888888889999999***********9999999999999999999887777666666666779999988776655 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.97
      FAM217  90 idRLlqLEwlQiqT 103
                 i+RLl  Ew+ + T
  KHJ31821.1 405 IQRLLPSEWHSLIT 418
                 89*******98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2993.92
//
Query:       KHJ31822.1  [L=336]
Description: putative casein kinase ii [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.7e-64  216.6   0.6    4.4e-64  216.4   0.6    1.1  1  Pkinase         Protein kinase domain
    2.1e-18   66.6   0.0      3e-18   66.0   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
    1.2e-06   28.7   0.0    7.2e-05   22.8   0.3    2.4  2  APH             Phosphotransferase enzyme family
     0.0032   16.3   0.0     0.0059   15.4   0.0    1.4  1  Pkinase_fungal  Fungal protein kinase
     0.0057   16.0   0.0     0.0077   15.6   0.0    1.3  1  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.019   14.4   0.3      0.039   13.3   0.3    1.5  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
      0.023   14.3   1.2       0.05   13.2   0.1    2.2  2  Choline_kinase  Choline/ethanolamine kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.4   0.6   1.7e-67   4.4e-64       1     264 []      32     317 ..      32     317 .. 0.91

  Alignments for each domain:
  == domain 1  score: 216.4 bits;  conditional E-value: 1.7e-67
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESSEEE..EEEE--TTEBHHHHHHHHSS-- CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekdely..lvleyveggeladllerkgsls 96 
                 ye+++k+G+G++++V+++++  + ++ ++K++k  k+kk k     rEikil++l+  pniv+l++v++++++ +  l++e ++++++ +l+ +   + 
  KHJ31822.1  32 YEVVRKIGRGKYSEVFEGINIVNYQKCVIKVLKPVKKKKIK-----REIKILQNLSgGPNIVELLDVVRDQQSKTpsLIFENINNTDFRSLYPK---FV 122
                 7899*****************************99988855.....7**********************96665555***************85...** PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHS CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLid.ekgelKitDFGlakelessskltsfvgtseYlAPEvl.keneyskkvDvWslGvilyelltg 193
                 + +++ +++++l++l+++Hskgi+HrD+Kp+N++id e+++l+++D+Gla+ ++++++++ +v+++++  PE+l + +ey+ + D+WslG ++++++++
  KHJ31822.1 123 DYDVRYYIYELLKALDFCHSKGIMHRDVKPHNVMIDhENRKLRLIDWGLAEFYHKGTQYNVRVASRYFKGPELLvDFQEYDYSLDMWSLGAMFASMIFR 221
                 ************************************88888*********************************888********************** PP

                 S-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS..............................-HHHHHHHHHHT-SSGCCSTTHHHHHTS CS
     Pkinase 194 kppfsgekgkekvekeldqlekilkilg.etkeklpeasei..............................seeakdllkkllkkdpkkRltaeellqh 261
                 k+pf + +++       dql+ki+k+lg e  +++  ++ei                              s+ea+++l+kll++d+++Rlta+e+++h
  KHJ31822.1 222 KEPFFHGNSN------SDQLVKIAKVLGtEDLFDYLDKYEIeldsqyddilgrfqkkswhsfvnsenqkfvSNEALNFLDKLLRYDHQERLTAKEAMAH 314
                 *****66655......57888888888842223334444446666678899************************************************ PP

                 GGG CS
     Pkinase 262 pyl 264
                 p++
  KHJ31822.1 315 PFF 317
                 **8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.0   0.0   1.2e-21     3e-18       3     211 ..      34     231 ..      32     245 .. 0.83

  Alignments for each domain:
  == domain 1  score: 66.0 bits;  conditional E-value: 1.2e-21
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvct..keepllivteyvkgGdLlkfLrkkek 97 
                  + +k+G+G++++V+eg        + +k+++K+lk  +++    ++ +e+ki+++l   pniv+ll v+   ++++  +++e +++ d+++   k   
   KHJ31822.1  34 VVRKIGRGKYSEVFEGINI----VNYQKCVIKVLKPVKKK----KIKREIKILQNLsGGPNIVELLDVVRdqQSKTPSLIFENINNTDFRSLYPK--- 120
                  6799************999....88999******776555....599*********999***********7666679***********9986555... PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHHHH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDvWsfGv 193
                    +   d+  +++++ k++++ +sk ++Hrd+   Nv++++ n++ ++ D GLa+  +k  +y+++  ++    +  pE l + + +  + D+Ws G 
   KHJ31822.1 121 --FVDYDVRYYIYELLKALDFCHSKGIMHRDVKPHNVMIDHeNRKLRLIDWGLAEFYHKGTQYNVRVASR---YFKGPELLVDFQeYDYSLDMWSLGA 213
                  ..577788899****************************973669**********997777776555443...4679**987755499999******9 PP

                  HHHHHHTTSSGTTTTSHH CS
  Pkinase_Tyr 194 llwEiftlgespypglkn 211
                  +   ++   e  ++g +n
   KHJ31822.1 214 MFASMIFRKEPFFHGNSN 231
                  887777654444444455 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.025        65      21      83 ..      56     115 ..      34     137 .. 0.72
   2 !   22.8   0.3   2.8e-08   7.2e-05     165     196 ..     142     172 ..     126     176 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.025
                 --EEEEEE-TTS-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-S CS
         APH  21 gryvlrrnpparaaeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsll 83 
                 ++ v ++  p   + +i re ++l++L++  + + e+l+   d++   ++++++e +  ++++
  KHJ31822.1  56 QKCVIKVLKPV-KKKKIKREIKILQNLSGG-PNIVELLDVVRDQQS-KTPSLIFENINNTDFR 115
                 56678888888.999*************99.557888886555544.4478888877666655 PP

  == domain 2  score: 22.8 bits;  conditional E-value: 2.8e-08
                 -EEEE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 165 ptvllHgDlhpgNllvdpddgrvtGviDfeda 196
                 +++++H+D +p+N+++d ++ ++  +iD+++a
  KHJ31822.1 142 SKGIMHRDVKPHNVMIDHENRKL-RLIDWGLA 172
                 689**************777776.9*****98 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   2.3e-06    0.0059     323     367 ..     141     180 ..     130     210 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2.3e-06
  Pkinase_fungal 323 flkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddss 367
                     +  +gi+HrD+  +N++i     +++rk  LiD  la  +++ ++
      KHJ31822.1 141 H-SKGIMHRDVKPHNVMID----HENRKLRLIDWGLAEFYHKGTQ 180
                     4.79**************9....5688999***999998886444 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0     3e-06    0.0077     153     250 ..     133     225 ..      57     240 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3e-06
  Kinase-like 153 lirlaanLqakglvhgkftvdnllldekg...glmlggftaLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclk 247
                  l++     ++kg++h +++++n++ d++    +l+  g+ + + +gt++ +    + f+ pEll     ++     ++ ++ld W lG+   ++  +k
   KHJ31822.1 133 LLKALDFCHSKGIMHRDVKPHNVMIDHENrklRLIDWGLAEFYHKGTQYNVRVASRYFKGPELLVD---FQ-----EYDYSLDMWSLGAMFASMIFRK 222
                  5555556689***************976411145556889**********99999*********99...44.....4889********9998888887 PP

  Kinase-like 248 lPl 250
                   P+
   KHJ31822.1 223 EPF 225
                  776 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.3   1.5e-05     0.039     134     166 ..     140     169 ..      94     184 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.5e-05
         Kdo 134 lhragvnHadlyaknillqqeeeeeaeiwliDl 166
                  h+ g++H+d+ ++n++++ e+   +++ liD 
  KHJ31822.1 140 CHSKGIMHRDVKPHNVMIDHEN---RKLRLIDW 169
                 59*****************997...99999995 PP

>> Choline_kinase  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1     2e-05      0.05     148     174 ..     146     172 ..      91     180 .. 0.79
   2 ?   -2.7   0.1       1.4   3.5e+03     168     197 ..     196     222 ..     194     236 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2e-05
                     E-S--SGGGEEE.-CTTEEEE--GTT- CS
  Choline_kinase 148 cHnDlqegNillnkeekklvlIDFEYa 174
                      H D+ ++N++ ++e++kl lID+  a
      KHJ31822.1 146 MHRDVKPHNVMIDHENRKLRLIDWGLA 172
                     368*********************655 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.4
                     E--GTT-EEEEHHHHHHHHHHHTTEEHHHC CS
  Choline_kinase 168 lIDFEYagynyrgfDlanhfiEwagdyeee 197
                     l+DF    y+  ++ l+ +f+ + +    +
      KHJ31822.1 196 LVDFQEYDYSLDMWSLGAMFASMIF---RK 222
                     7888555899999999999999988...22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       744  (0.041497); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2405.99
//
Query:       KHJ31823.1  [L=283]
Description: putative rnase p subunit p30 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.2e-54  183.6   0.0      4e-54  183.3   0.0    1.1  1  RNase_P_p30  RNase P subunit p30


Domain annotation for each model (and alignments):
>> RNase_P_p30  RNase P subunit p30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.3   0.0   2.3e-58     4e-54       1     215 []       3     216 ..       3     216 .. 0.93

  Alignments for each domain:
  == domain 1  score: 183.3 bits;  conditional E-value: 2.3e-58
                  EEEEE-SH..........HHHHHHHHH-SEEEEEEEEEESS---HHHHH........HHHHHHHH..HHSSEEEEEEES-H.HHHHHHHHH--EEEEE CS
  RNase_P_p30   1 ydlnipwpsddskkks.rtiktlaelgytgvainftveaekekkpnase.pikeelkelkkelsglkllsRvtlvvsdpsklqrlskvrqkfdllavr 96 
                  ydlnipw++     +  rti+ l +lgy++ a+++t   ++ + + ++  pi++ ++      ++++ll+R+t+v+sdp++  rl+ ++q+fd+la+r
   KHJ31823.1   3 YDLNIPWSPTITPLSLeRTITFLSDLGYQTLALTYTQPDHSLNSKHSNLiPINFSFD----IPPKVTLLRRCTIVYSDPAHNYRLQSISQQFDILAIR 96 
                  8*******998655448*********************9999999999955554333....345689*************99**************** PP

                  --SHHHHHHHHHT..T-SEEE-TTTTSSS-S--HHHHHHHHHHT-EEEEESHHHHHS-HHHHHHHHHHHHHHHHHHHH--EEEE--BSSGGG---HHH CS
  RNase_P_p30  97 Pttekalraacenl.dvDiisidltsrlpfglkhktiraAvergvafEinyspllrdsglaRrnfisnarkllrltrgkgvviSSgAesplelRnpyd 193
                  Pt+eka+ a c +  +  iis+dlt r pf++k k ++ A++rg+++Ei+y++++ +++  Rrnfisn +++ r t g+g++iSS+A ++ ++R+++d
   KHJ31823.1  97 PTNEKAFLASCVTItEHSIISLDLTIRYPFHFKPKPLMTAIKRGIKIEISYGQCIGADAVGRRNFISNTMSIFRCTSGRGLIISSEAVNAVSCRGMHD 194
                  ***********77769********************************************************************************** PP

                  HHHHHHHHT--HHHHHHTTTHH CS
  RNase_P_p30 194 iinLlktlGLeedrakeavsen 215
                  ++nL  ++GL++++a e +++n
   KHJ31823.1 195 LVNLFGVWGLSKEKAIEGLGKN 216
                  ****************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       308  (0.0171789); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 2042.57
//
Query:       KHJ31824.1  [L=278]
Description: putative msp domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.8e-27   93.5   0.7    1.6e-26   92.3   0.7    1.7  1  Motile_Sperm  MSP (Major sperm protein) domain
     0.0011   19.1   0.0     0.0031   17.7   0.0    1.7  1  ASH           Abnormal spindle-like microcephaly-assoc'd, ASP


Domain annotation for each model (and alignments):
>> Motile_Sperm  MSP (Major sperm protein) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.3   0.7   1.8e-30   1.6e-26       2      96 ..       3      98 ..       2     124 .. 0.89

  Alignments for each domain:
  == domain 1  score: 92.3 bits;  conditional E-value: 1.8e-30
                  SEEESSSEEEEESSTSSHEEEEEEEEE-SSSSEEEEEEES-TTTEEEESSEEEETTTCEEEEEEEEESSSSSTTSTC..CEEEEEEEEES-TT-STH CS
  Motile_Sperm  2 lkidPsdllvfaaelnkqgtsklklkNtskkrvaFkvkttapkkyrvrPnvGiikpgesveitvtlkpldeepsekk..kdkfviqylevpgdekde 96
                  ++idP  +l f  ++++++++ lk+kN+ +++vaFkvkttapk+y+vrPn+G i+pg++ve++v l++ +e p+ +   +dkf++q++ v g+++++
    KHJ31824.1  3 IEIDPI-ELSFHRPFTSEVSQILKIKNPNQTHVAFKVKTTAPKQYCVRPNCGKIEPGKEVEVNVLLQAMKEDPPLDTrcRDKFLVQSVAVAGENENP 98
                  789998.677777799****************************************************99998766588***********6666544 PP

>> ASH  Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   3.4e-07    0.0031      14      75 ..      10      68 ..       5      83 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 3.4e-07
                EEE-----EEEEEEE-EEESS-SS--EEEEEEEE--XXXXXXXXXXXXXXXXXXXXXXXXXX CS
         ASH 14 vsFgdvkvGssaerlLtveNpseepaevkvskvpaaekgfsveetelevqpgesvtltvtwt 75
                +sF   + +s  ++ L+++Np+++ +  kv++++   k++ v +++ +++pg++v ++v ++
  KHJ31824.1 10 LSFH-RPFTSEVSQILKIKNPNQTHVAFKVKTTA--PKQYCVRPNCGKIEPGKEVEVNVLLQ 68
                5565.67788999**********99999998888..99*******************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       642  (0.0358079); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2027.35
//
Query:       KHJ31825.1  [L=506]
Description: putative vacuolar aspartyl protease (proteinase a) [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-58  197.5   3.2    4.3e-58  197.2   3.2    1.1  1  Asp       Eukaryotic aspartyl protease
    1.3e-11   45.1   5.2    2.4e-09   37.7   5.2    2.4  1  TAXi_N    Xylanase inhibitor N-terminal
    0.00015   21.6   0.0    0.00027   20.7   0.0    1.4  1  TAXi_C    Xylanase inhibitor C-terminal


Domain annotation for each model (and alignments):
>> Asp  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.2   3.2   7.2e-62   4.3e-58       1     315 []     124     431 ..     124     431 .. 0.94

  Alignments for each domain:
  == domain 1  score: 197.2 bits;  conditional E-value: 7.2e-62
                 EEEEEEEETTTTEEEEEEEETT--SEEEEBTTESTSHCHHTSS-B-GGG-TT-EEEEEEEEEECTTSEEEEEEEEEEEEETTEEEEEEEEEEEEEESSH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp   1 eYfgeisiGtpeqkftvifDTGSsdlWVpsskckkssackshstydpskSstykkngkslsisYGdgsvsGflsqdtvkvggltvknqefgeatkepgs 99 
                 +Yfge+ +G+ + k  +++DTG    WV+ s+ck    c+s++t+  ++Sst++ + +++s++YG+gs sG+l++dtv+++g +   + fg at  ++ 
  KHJ31825.1 124 TYFGEVFLGSRSSKVYMLLDTGADSSWVMGSECK-DPICTSRDTFGGQNSSTFEVSDTKFSVNYGSGSCSGVLAKDTVNFAGFSFR-MPFGVATMVSK- 219
                 5********************************9.899**********************************************98.9*******999. PP

                 HHTTSSSSEEEE-S-GGGSCGGSCCHHHHHHHTTSSSSSEEEEEE-S..TTSSEEEEEESSEEGGGEEEEEEEEEESS.TSSTEEEEEEEEETTEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxx RF
         Asp 100 tflaakfdGiLGlgfkeisveeatpvfdnlvsqglikepvfsvylnr..eeeeggeivfGgvDeskykGsltyvpvts.kgywqielesvtvggktvlc 195
                  f + ++ GiLGl+f++ ++ +   ++d +v+ + +++++f++ l++  + +++g i fG  D+s+++G+l y p++  k+ w+i l+   +g++++  
  KHJ31825.1 220 EFDSFEIYGILGLSFSKSKTPS---FVDSVVASKSLERNLFGISLSQtkDGNNTGVINFGSPDTSRFSGDLKYYPLSGnKNDWKIYLGAAGFGEEQI-- 313
                 599999*********9887744...5899*****************9888999************************85777***************.. PP

                 EEEEEEEEETTCSSEEEEHHHHHHHHHHHTTEEEETTC.EEEEETTGGGGSEEEEEEETTEEEEEEGGGGEEEESSSTTSEEEESE.EECCTSSSEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx RF
         Asp 196 ssgcqailDtGTsllalptsivekiakaigakkseseg.eyvvdCdslsslpdisftiggakitvpvselvlkeeeseesqCilgl.vseeegdlwiLG 292
                 + +   + DtG++ + +p +i + i +++ ++ s+++g ++ v Cd+   + ++ f +g+ ++t+p+   v  ++++ ++qC ++l  +++++  w+LG
  KHJ31825.1 314 TMNRTTLFDTGATNIFAPLEITNMIYSNVPGAGSKDNGsNWQVPCDT---TVNLVFRFGSDEYTLPPAMWVGPPTTT-DGQCWSNLsGTDQTNGEWVLG 408
                 888899***********************8888887652799****6...999***************999999975.59******77788899***** PP

                 HHHHTTEEEEEETTTTEEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxx RF
         Asp 293 dvFlrsayvvfdldnnrvglAea 315
                 d Fl+++yvvfd+d++r+g+A++
  KHJ31825.1 409 DFFLKNYYVVFDIDKRRIGIANV 431
                 *********************85 PP

>> TAXi_N  Xylanase inhibitor N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   5.2   4.1e-13   2.4e-09       1     178 []     125     277 ..     125     277 .. 0.81

  Alignments for each domain:
  == domain 1  score: 37.7 bits;  conditional E-value: 4.1e-13
      TAXi_N   1 YlvsisiGtppqplklvvDtGsdltWvqCkpckacssqkkpvfdpsksstykavpcssslCkac.easssaksgsssstceyeisygadgssssGvlat 98 
                 Y+ ++ +G+   ++++++DtG d +Wv                           +c+++ C++  +  ++++s+ + s  +++++yg  g s sGvla+
  KHJ31825.1 125 YFGEVFLGSRSSKVYMLLDTGADSSWVMG------------------------SECKDPICTSRdTFGGQNSSTFEVSDTKFSVNYG-SG-SCSGVLAK 197
                 8999999********************99........................5788999994424566666777788889999996.55.99****** PP

      TAXi_N  99 dtltlsstdgksvkvpnlvfGCgksnlgglaa.gadGilGLGrgk...lSlvsqlaskg.slgnkFsyCL.ssssssssgvlffGd 178
                 dt+ +      + ++ ++ fG ++  ++++ + +  GilGL+++k    S+v+ + +++   +n F++ L ++++ +++gv++fG+
  KHJ31825.1 198 DTVNF-----AGFSF-RMPFGVATMVSKEFDSfEIYGILGLSFSKsktPSFVDSVVASKsLERNLFGISLsQTKDGNNTGVINFGS 277
                 *****.....33333.688***996666665548********98866679998887777245678*****99*************7 PP

>> TAXi_C  Xylanase inhibitor C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   4.6e-08   0.00027      86     160 ..     350     429 ..     341     430 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 4.6e-08
                 ...-S---...-EEEEESSS-.EEEE-GGGGEEE-S.SSEEEE-EEE--S--SSSEEE-HHHHBTS-EEEETTTTEEEEE CS
      TAXi_C  86 tragpavP...titlvlegga.ewtisgenllvkve.ggvvClafvesgvagesavviGglqlednllvFDleksrlgFs 160
                 +  +++vP   t++lv++ g+ e t++++  +   +  +  C   ++++++++++ v+G + l+++++vFD++k+r+g +
  KHJ31825.1 350 NGSNWQVPcdtTVNLVFRFGSdEYTLPPAMWVGPPTtTDGQCWSNLSGTDQTNGEWVLGDFFLKNYYVVFDIDKRRIGIA 429
                 55566666666899999998879999998888887756799************************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       383  (0.021362); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 3420.82
//
Query:       KHJ31826.1  [L=535]
Description: hypothetical protein EV44_g1357 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1157  (0.0645323); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3775.64
//
Query:       KHJ31827.1  [L=535]
Description: putative acid phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-29  104.0   0.0    3.9e-29  102.2   0.0    2.0  1  NDT80_PhoG  NDT80 / PhoG like DNA-binding  family


Domain annotation for each model (and alignments):
>> NDT80_PhoG  NDT80 / PhoG like DNA-binding  family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.2   0.0   2.2e-33   3.9e-29       1     186 []     172     331 ..     172     331 .. 0.85

  Alignments for each domain:
  == domain 1  score: 102.2 bits;  conditional E-value: 2.2e-33
  NDT80_PhoG   1 ewvcyrRNyfqvvasfeleglslekfvkhsftilenelesgeklpikyfalkikatknseddseielvq.....htakrdkgpqfaPeivalvpkelpk 94 
                 e++cyrRN+fq+++++ l      + ++  +       e+g+ +pi +++ +++a ++ e ++++e+++       ++ ++++  +P+  +l       
  KHJ31827.1 172 ELTCYRRNLFQISGAMIL-----SRGMNGIIN------EQGQHIPIFNLEATLTAFESIE-GKNAEIISvpwktSCNTSEEKSGTTPSSLPL------- 251
                 68****************.....999998887......9********************8.********66655334444444555555544....... PP

  NDT80_PhoG  95 hqlireasnvrnesklkkfdeikkvarfeRlqFksatannkrrkq.qrffkLvvkllaivekeeskgteikiaelespplIVRGrsPsnyesr 186
                    + +   + +       ++++ +++++RlqFk+atann+rrk+ q+++ ++v+l+a    + ++g+  k+ae++s p+IVRGrsP+n++sr
  KHJ31827.1 252 ---DLNINPELDP------SNASIPISWKRLQFKHATANNGRRKGlQQHYIVQVNLVA----TLANGEIFKLAEIQSGPIIVRGRSPRNFDSR 331
                 ...2233333333......67999*********************************8....8***************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3952.69
//
Query:       KHJ31828.1  [L=105]
Description: hypothetical protein EV44_g3576 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.058   13.3   0.0       0.52   10.3   0.0    1.9  2  CobW_C    Cobalamin synthesis protein cobW C-terminal domain


Domain annotation for each model (and alignments):
>> CobW_C  Cobalamin synthesis protein cobW C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0    0.0029        52      65      87 ..      32      61 ..      12      63 .. 0.69
   2 ?   10.3   0.0   2.9e-05      0.52      15      56 ..      58     100 ..      46     103 .. 0.71

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0029
      CobW_C 65 a.......ededrrseLVfIGrdldkeale 87
                +       ++ ++r  +Vf+ ++l++++l 
  KHJ31828.1 32 ShnpslqdSHSSPRVSIVFVSTSLSPQQLL 61
                145555557789999**********99986 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 2.9e-05
      CobW_C  15 erleelleeelpegilRaKGivwlagkpd..alvlqgvggrlrl 56 
                 ++l        +++ +R+KG +  +++pd  +l++q+vg  l++
  KHJ31828.1  58 QQLLSRSPH-DWPREYRVKGSILSQRTPDesKLLVQMVGCWLDF 100
                 333333333.69999******99999977699******987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       212  (0.0118244); expected 358.6 (0.02)
Passed bias filter:                      178  (0.00992805); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.21s 00:00:00.56 Elapsed: 00:00:00.36
# Mc/sec: 862.76
//
Query:       KHJ31829.1  [L=189]
Description: hypothetical protein EV44_g4170 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       527  (0.0293937); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1428.22
//
Query:       KHJ31830.1  [L=583]
Description: putative sh3 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-33  114.1   1.2    7.2e-33  113.4   1.2    1.4  1  VHS       VHS domain
    9.7e-18   63.5   0.1    1.8e-17   62.6   0.1    1.5  1  SH3_1     SH3 domain
    8.6e-15   54.3   0.1    1.5e-14   53.6   0.1    1.4  1  SH3_9     Variant SH3 domain
    2.9e-13   49.3   0.0    5.3e-13   48.4   0.0    1.5  1  SH3_2     Variant SH3 domain
    1.1e-10   41.7   1.0      3e-10   40.3   0.3    2.1  2  GAT       GAT domain
  ------ inclusion threshold ------
      0.047   12.9   0.1        1.8    7.8   0.0    2.2  2  DUF4420   Putative  PD-(D/E)XK family member, (DUF4420)
        1.9    8.6   6.3       0.31   11.0   2.2    1.9  2  UIM       Ubiquitin interaction motif


Domain annotation for each model (and alignments):
>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.4   1.2   2.8e-36   7.2e-33       6     140 ..       8     139 ..       3     140 .. 0.96

  Alignments for each domain:
  == domain 1  score: 113.4 bits;  conditional E-value: 2.8e-36
                 HHHHHHHHHT-TT-SS--HHHHHHHHHHHHCSTCHHHHHHHHHHHHHT-SSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHCTTTCHCS CS
         VHS   6 slekliekATdeslreedlslileicDlinekeagpkeavrlikkkinsknphvallaLklldalvkNcGskfhleiaskeflnelvklilekknskla 104
                 ++++ + kATde l++e++++i+++cD +  +e+g+k+av ++ k++ ++n++v+l++L+l ++l +NcG k+h e as+ f++ l++l++ ++ +++ 
  KHJ31830.1   8 AFDEIVAKATDENLTSENWEYIMDVCDKVTGDENGAKDAVLSLIKRLAHRNANVQLYTLELANSLSQNCGLKLHRELASRAFTDALLRLAADRSTNQQ- 105
                 57899*************************************************************************************99999997. PP

                 .HHHHHHHHHHHHHHHTTT-TTGHHHHHHHHHHHHT CS
         VHS 105 kvkkkvlelleeWadafknkpelkkisdvykllkrk 140
                  vk k++e ++eW ++f ++ +l  ++d y+ lk++
  KHJ31830.1 106 -VKAKIIERMQEWVEMF-KDLDLGIMRDQYEVLKSR 139
                 .****************.889************986 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.6   0.1   7.1e-21   1.8e-17       1      47 [.     220     264 ..     220     265 .. 0.97

  Alignments for each domain:
  == domain 1  score: 62.6 bits;  conditional E-value: 7.1e-21
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEE CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgtgkeGliP 47 
                 +AlYD++a+++dEL+f kGD+i vle + ++Wwkg lk  g++G++P
  KHJ31830.1 220 RALYDFQATDPDELNFSKGDIIAVLESVYKDWWKGLLK--GRTGIFP 264
                 7*************************************..69***** PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.1   5.9e-18   1.5e-14       1      49 []     221     269 ..     221     269 .. 0.99

  Alignments for each domain:
  == domain 1  score: 53.6 bits;  conditional E-value: 5.9e-18
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegsltGrtGlvPanyve 49 
                 Aly+++++++deL +++GD+i v+e    +W+ g l+GrtG +P nyve
  KHJ31830.1 221 ALYDFQATDPDELNFSKGDIIAVLESVYKDWWKGLLKGRTGIFPLNYVE 269
                 8***********************************************7 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   0.0   2.1e-16   5.3e-13       1      56 [.     218     270 ..     218     271 .. 0.95

  Alignments for each domain:
  == domain 1  score: 48.4 bits;  conditional E-value: 2.1e-16
                 EEEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEECCCEEEEEGCGEEE CS
       SH3_2   1 yvraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegevgGrvGlfPsslvee 56 
                 +vra+ d+ ++d++eL+f kGd+i+vl   ++   +ww+g  +Gr G+fP ++ve+
  KHJ31830.1 218 RVRALYDFQATDPDELNFSKGDIIAVL---ESVYKDWWKGLLKGRTGIFPLNYVEK 270
                 689************************...77777*******************97 PP

>> GAT  GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.5   3.9e+03      22      49 ..      47      74 ..      29      79 .. 0.68
   2 !   40.3   0.3   1.2e-13     3e-10       2      75 ..     294     364 ..     293     366 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.5
         GAT 22 enellkeLyetckamqpriqklieetad 49
                   l+k L+++  ++q    +l++++++
  KHJ31830.1 47 VLSLIKRLAHRNANVQLYTLELANSLSQ 74
                4556777777776666666666666554 PP

  == domain 2  score: 40.3 bits;  conditional E-value: 1.2e-13
         GAT   2 nnaklLsemLsstepdeellenellkeLyetckamqpriqklieetadeedllaelLqlNDeLnnvlerYerlk 75 
                 +n++ L  +Ls+++pd ++++ne + +Ly +  am+p++++li+++++++d   e+ qlN+ + +  + Ye l+
  KHJ31830.1 294 KNVEKLLTLLSTASPDMNVQDNEEIGKLYYSTLAMRPKLIELIGKYSQKKD---EFTQLNERFIKSCRDYESLL 364
                 69************9999********************************8...****************9987 PP

>> DUF4420  Putative  PD-(D/E)XK family member, (DUF4420)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0   0.00069       1.8      82     129 ..      81     125 ..      33     133 .. 0.67
   2 ?    2.9   0.0     0.021        53      23     104 ..     281     360 ..     249     372 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00069
     DUF4420  82 kdselreiFatlcedlvesledeedekellsavverlkrWqellrklk 129
                   +  ++ F+     l++ + d ++++++ ++++er+++W e+++ l 
  KHJ31830.1  81 HRELASRAFTD---ALLRLAADRSTNQQVKAKIIERMQEWVEMFKDLD 125
                 44444444444...4556666777778899**************9865 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.021
     DUF4420  23 lssesplsiflaideegkkrlllssvkkasksrsaklslkqvklsesstenskslelslkdselreiFatlcedlveslede 104
                  +++ + ++f+ i++ +k   lls+ +++ +++++  ++ ++ +s +   + k++el+ k s++++ F++l e +++s +d 
  KHJ31830.1 281 REAQVEAEVFAEIKNVEKLLTLLSTASPDMNVQDN-EEIGKLYYS-TLAMRPKLIELIGKYSQKKDEFTQLNERFIKSCRDY 360
                 44556678889999999999998888888888777.455555544.4444455666********************998875 PP

>> UIM  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   2.2   0.00012      0.31       2      15 ..     162     175 ..     161     176 .. 0.93
   2 ?   -2.9   0.1       3.3   8.6e+03      12      16 ..     392     396 ..     392     396 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00012
         UIM   2 EdedLqrAlalSlq 15 
                 E+e+Lq Al+lS q
  KHJ31830.1 162 EEEELQIALRLSIQ 175
                 9***********99 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3.3
         UIM  12 lSlqE 16 
                 lS+qE
  KHJ31830.1 392 LSRQE 396
                 8***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (583 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       710  (0.0396006); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.39
# Mc/sec: 4438.22
//
Query:       KHJ31831.1  [L=79]
Description: putative te1b-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.21s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 617.76
//
Query:       KHJ31832.1  [L=86]
Description: putative mitochondrial import inner membrane translocase subunit tim13 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-20   71.6   0.9    3.8e-20   71.3   0.9    1.1  1  zf-Tim10_DDP     Tim10/DDP family zinc finger
  ------ inclusion threshold ------
      0.026   14.5   0.6      0.038   14.0   0.6    1.3  1  Ins_beta         Nematode insulin-related peptide beta type
      0.032   14.4   0.0      0.042   14.0   0.0    1.1  1  SANT_DAMP1_like  SANT/Myb-like domain of DAMP1
      0.043   14.3   0.2      0.067   13.6   0.1    1.3  1  DUF3398          Domain of unknown function (DUF3398)


Domain annotation for each model (and alignments):
>> zf-Tim10_DDP  Tim10/DDP family zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.3   0.9   8.6e-24   3.8e-20       2      63 ..      14      74 ..      13      75 .. 0.96

  Alignments for each domain:
  == domain 1  score: 71.3 bits;  conditional E-value: 8.6e-24
  zf-Tim10_DDP  2 qleqeqqvanaqelvnkltekCfkkCigkypgssLdsseesCldnCvdryldvsnlvskrlq 63
                  q++ e+ +an ++l++k++++Cf+kCi+k pg+ L+ se+sCl++C+++y+ ++ +v ++++
    KHJ31832.1 14 QVRDEATLANGKQLIEKVNDNCFEKCIPK-PGAALSTSETSCLTQCMEKYMMAWSIVHRQYT 74
                  8999***********************99.****************************9996 PP

>> Ins_beta  Nematode insulin-related peptide beta type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.6   8.4e-06     0.038       5      42 ..      24      63 ..      20      65 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 8.4e-06
                HHHHHHHHHHHTSSSS---S-TTHHHH..HTTT---HHHH CS
    Ins_beta  5 GrrLvkrVlalCGeecnvqndvdiatk..CCkkeCtddyI 42
                G++L+ +V+  C e+c ++ +  ++t+  +C ++C ++y+
  KHJ31832.1 24 GKQLIEKVNDNCFEKCIPKPGAALSTSetSCLTQCMEKYM 63
                99**********999*9999988876444******99885 PP

>> SANT_DAMP1_like  SANT/Myb-like domain of DAMP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   9.4e-06     0.042      12      57 ..      28      75 ..      21      81 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 9.4e-06
  SANT_DAMP1_like 12 vpeytdeeYeellke..edWtkeetdyLfdlckeydlrfvviaDryel 57
                     + + +d+ +e+++ +  +  + +et+ L + +++y + + +++ +y  
       KHJ31832.1 28 IEKVNDNCFEKCIPKpgAALSTSETSCLTQCMEKYMMAWSIVHRQYTN 75
                     567788889999988555699**********************99975 PP

>> DUF3398  Domain of unknown function (DUF3398)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   1.5e-05     0.067      50      84 ..      38      75 ..      26      78 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.5e-05
     DUF3398 50 stvPe..eaekeldsl.VreciktYtsdwkvveykyek 84
                +++P+   a+++ +   +++c++ Y+  w++v+++y +
  KHJ31832.1 38 KCIPKpgAALSTSETScLTQCMEKYMMAWSIVHRQYTN 75
                566665445555555569*****************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 657.97
//
Query:       KHJ31833.1  [L=321]
Description: putative legume-like lectin family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-61  206.5   0.0    4.7e-61  206.1   0.0    1.1  1  Lectin_leg-like  Legume-like lectin family
    4.5e-06   26.4   0.0      0.012   15.2   0.0    2.1  2  Lectin_legB      Legume lectin domain
    1.7e-05   24.9   0.0    2.8e-05   24.2   0.0    1.3  1  Bact_lectin      Bacterial lectin


Domain annotation for each model (and alignments):
>> Lectin_leg-like  Legume-like lectin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.1   0.0   7.9e-65   4.7e-61       5     228 ..      35     255 ..      32     257 .. 0.94

  Alignments for each domain:
  == domain 1  score: 206.1 bits;  conditional E-value: 7.9e-65
                      GGGECCCTSCTCTTSSBTTEEEEET-EEE.SSEEEEE-SSTTEEEEEEESS-BEESSEEEEEEEEEESS--SS-S-EEEEEEESSSSSCCSBTT CS
  Lectin_leg-like   5 rehslkkPylgqgskalpnWeyggsaild.snqirltsdeqskkGslwtkspvaleswevevsFrvtgseselegdglaiwytsergkegpvFg 97 
                      r hsl+ Pyl +  ++  + ++gg++i+  +++irltsd  s+ G+++++ p++  +weve++F++ gs ++l+gdg+a+w+t++r+++gpvFg
       KHJ31833.1  35 RTHSLNMPYLDTDLQS-RWFDFGGDTIIRaDQYIRLTSDRPSQGGWIFSRVPLTATNWEVEFEFKISGS-GSLHGDGFALWLTKQRATPGPVFG 126
                      78********999555.599*******99899*************************************.88********************** PP

                      B-SS-EEEEEEEE-S-TSCTTTSS-SSEEEEEEEESSC---GGGTTTTTESEEEE-.--BTESSEEEEEEEEETTEEEEEEETSCCSCCCTTEE CS
  Lectin_leg-like  98 skdkfdGlailldtydndngpdkknkptisamlndgsleydhekdgkaqelasCta.dfrnkdvetlikikYdknaltvlidsgllenkndykl 190
                      s+d+f+G++i++dty+n++++   ++p+++am++dg+++yd+++dgk++e+ +C+a + r+ +++t++++ Y +  ++++ d  + + ++++ l
       KHJ31833.1 127 STDRFEGIGIFFDTYKNNRPG--VVFPYVMAMIGDGTKSYDKDHDGKDNEFMGCSAkGLRDAPIPTKARLIYFQ-DKSLRLDLQY-KIEDQWDL 216
                      *******************88..6********************************88**************97.7899999886.99****** PP

                      EEEESSE.E--SSBEEEEEEEESSSGGEEEEEEEEEEEE CS
  Lectin_leg-like 191 Cfqvkev.elPtgyyfgvsaatgdlsdnhdvlsllllql 228
                      Cf++++   +P   y+g+sa+tg+lsdnhd++ + + +l
       KHJ31833.1 217 CFETSDPpVIPPVVYLGFSAETGELSDNHDLIAVSTKNL 255
                      ****985268*********************99887766 PP

>> Lectin_legB  Legume lectin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0     2e-06     0.012      17     105 ..      54     137 ..      45     152 .. 0.73
   2 !    9.2   0.0   0.00013      0.79     204     242 ..     225     262 ..     196     269 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 2e-06
  Lectin_legB  17 tlegdAsvsasgllqLtnktsnssvGralYkkplkLwdkssgnvasFstsFvfaIssskssssgdGlAFflaps.....pslpaasagqyLGLf 105
                   + gd+ + a++ ++Lt++  + + G+++  + ++L       +++++++F f+Is  + s +gdG+A  l+++     p + +++  + +G+f
   KHJ31833.1  54 DFGGDTIIRADQYIRLTSDRPS-QGGWIF--SRVPLT------ATNWEVEFEFKIS-GSGSLHGDGFALWLTKQratpgPVFGSTDRFEGIGIF 137
                  567899999999****999766.778886..456666......468*********5.45599**********9955544345555555566666 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00013
  Lectin_legB 204 vlpeekvyvGFSastgsvsveahyilsWsFsss.epaeal 242
                  v+p   vy GFSa tg++s  +h +++ s ++  +++ ++
   KHJ31833.1 225 VIP-PVVYLGFSAETGELS-DNHDLIAVSTKNLhDTKAHE 262
                  566.469**********77.****9999987774444444 PP

>> Bact_lectin  Bacterial lectin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   4.6e-09   2.8e-05       9     189 ..      52     245 ..      44     252 .. 0.72

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 4.6e-09
                  HEEEEET-E...E.EEEEE-SSTT-EEEEEESSEEETTS-EEEEEEEE--S...B.--EEEEEEEST----SGGGTTTTTSTT-EEEEEE-S--.... CS
  Bact_lectin   9 yfnlngtatkksk.ivtltedkknqaGavtlknkiDlskdFtlkgsvnlgqsnaggaDGigFalqpgqlGssGgglGigglpnafgfklDtyyN...k 102
                   f++ g++    + +++lt d  +q G + ++ ++    ++++++++ + +s +  +DG+++ l + q  ++G  +G      ++g+ +Dty N   +
   KHJ31833.1  52 WFDFGGDTIIRADqYIRLTSDRPSQGGWIFSRVPLTA-TNWEVEFEFKISGSGSLHGDGFALWLTK-QRATPGPVFGSTDRFEGIGIFFDTYKNnrpG 147
                  566666555444469************9999999987.79**********888999*********9.77899**********************8775 PP

                  .SS-EEEEEEE.............-TT-.......................-SSS--EEEEEEE..-TTTEEEETHHHT-.............SEEEE CS
  Bact_lectin 103 agkpygafvktdangsletvkss.ssks.......................ledgkwhpitisYdastkttvtyddgsstvsidltkkvtkgktyvaf 176
                     py++ +  d+++s ++  ++ ++                         +  +k   ++++Y+ +++       ++   +   t++     + v++
   KHJ31833.1 148 VVFPYVMAMIGDGTKSYDKDHDGkDN-EfmgcsakglrdapiptkarliyfQ--DKSLRLDLQYKIEDQ-------WDLCFE---TSDPPVIPPVVYL 232
                  66678888888777777766666333.3699999998888765444444431..223444444433333.......333222...222223478899* PP

                  EEEEE-SSSB--E CS
  Bact_lectin 177 giaastGgatnlq 189
                  g++a+tG+ + ++
   KHJ31833.1 233 GFSAETGELSDNH 245
                  ******9987666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2561.78
//
Query:       KHJ31834.1  [L=104]
Description: hypothetical protein EV44_g4982 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.18   11.8   0.0       0.33   11.0   0.0    1.3  1  Tetrabrachion  Tetrabrachion


Domain annotation for each model (and alignments):
>> Tetrabrachion  Tetrabrachion
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   1.8e-05      0.33      20      36 ..      12      28 ..      11      31 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 1.8e-05
                   HHHHHHHHHHHHHHHHH CS
  Tetrabrachion 20 RYesLknLitLRaDRLe 36
                   R e  knL  LRaDR e
     KHJ31834.1 12 RKELNKNLFSLRADRTE 28
                   56778**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 815.94
//
Query:       KHJ31835.1  [L=281]
Description: putative methyltransferase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.5e-14   53.0   4.4    8.2e-14   52.1   4.4    1.4  1  WBS_methylT      Methyltransferase involved in Williams-Beure
      4e-11   43.4   0.0    7.1e-11   42.6   0.0    1.4  1  Methyltransf_11  Methyltransferase domain
      1e-10   42.1   0.0    2.1e-10   41.2   0.0    1.6  1  Methyltransf_25  Methyltransferase domain
    8.9e-06   26.4   0.0      2e-05   25.3   0.0    1.6  1  Methyltransf_12  Methyltransferase domain
    0.00013   21.8   0.0    0.00023   21.0   0.0    1.4  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
    0.00037   20.4   0.0    0.00055   19.8   0.0    1.2  1  Methyltransf_23  Methyltransferase domain
    0.00098   18.9   0.0     0.0016   18.2   0.0    1.4  1  Methyltransf_31  Methyltransferase domain
      0.003   16.9   0.1      0.013   14.8   0.0    2.0  3  Ubie_methyltran  ubiE/COQ5 methyltransferase family
     0.0054   16.1   0.0      0.029   13.6   0.0    1.9  1  CMAS             Mycolic acid cyclopropane synthetase


Domain annotation for each model (and alignments):
>> WBS_methylT  Methyltransferase involved in Williams-Beuren syndrome
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.1   4.4   4.1e-17   8.2e-14      25      81 ..     219     278 ..     199     279 .. 0.68

  Alignments for each domain:
  == domain 1  score: 52.1 bits;  conditional E-value: 4.1e-17
  WBS_methylT  25 eaeqvkyekrrrkrkkr.kkkkkkavk..sreWilkKKerrrkkGkeVkrdSKYTGRkRk 81 
                   +e+v++ + r+ r+   ++  +++vk  s+ Wi+kKKer+++kGk Vk+ SKYTGRkR+
   KHJ31835.1 219 GMEDVNVVDMRKGRNGTnSNFMNNSVKkgSKAWIMKKKERMERKGKIVKNSSKYTGRKRR 278
                  45555555555544444322222233346******************************7 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6   0.0   3.6e-14   7.1e-11       1      96 []      52     157 ..      52     157 .. 0.91

  Alignments for each domain:
  == domain 1  score: 42.6 bits;  conditional E-value: 3.6e-14
                      EEET-TTSHHHHHHHHTT..SEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCC.TSS-TT-EEEEEEES-CCC-.C..........CHHHH CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg..arvvgvDlskemlklakekaseeglkvefvvadaek.lpfednsfDlvvssevlhhv.e..........dpeka 80 
                      Ld+GcG+G+  e l ++   +  +g+D+s+ ml++a ++ +e +    ++ +d+ + +pf+ +sfD+ +s ++++++ +          +++++
       KHJ31835.1  52 LDIGCGSGLSGEILSSNPepHMWIGMDISPSMLDIALQRDVEGD----LMLMDFGQgVPFRAGSFDAAISISAIQWLcNaessevssigRLSRF 141
                      8**************777889***************99999987....499***9978*******************8345778888999**** PP

                      HHHHHHHEEEEEEEEE CS
  Methyltransf_11  81 lkeiaRvLkpgGllvi 96 
                      ++ ++  L+ gG+ v+
       KHJ31835.1 142 FNGLYASLRRGGKAVC 157
                      ************9875 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.0     1e-13   2.1e-10       1      81 [.      51     128 ..      51     153 .. 0.81

  Alignments for each domain:
  == domain 1  score: 41.2 bits;  conditional E-value: 1e-13
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBC.CGBSSSTTTEEEEEEESTGGGSSHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeeglnvefvqgda.edlpfedgsfDlvvssgalhhlsded 81 
                      +Ld+GcG+G   + l+ + + + ++g+Dis++ml++a +r     ++ +++ +d+ + +pf +gsfD+ +s+ a+++l +++
       KHJ31835.1  51 ILDIGCGSGLSGEILSSNPEPHMWIGMDISPSMLDIALQRD----VEGDLMLMDFgQGVPFRAGSFDAAISISAIQWLCNAE 128
                      8********999999999658*****************999....7899******666*************88898754443 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   9.9e-09     2e-05       1      98 [.      52     154 ..      52     155 .. 0.77

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 9.9e-09
  Methyltransf_12   1 LeiGcGtGsllralleklpdieyt.gvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhl...........kdi 82 
                      L+iGcG+G l+ ++l ++p+ +   g+Disps+++ a ++  + +    ++ +     +      +sfD+ ++++++++l             +
       KHJ31835.1  52 LDIGCGSG-LSGEILSSNPEPHMWiGMDISPSMLDIALQRDVEGDLMLMDFGQGVPFRA------GSFDAAISISAIQWLcnaessevssiGRL 138
                      8*****99.5555556666666666*********8887777776665555555555444......3**************99999999888888 PP

  Methyltransf_12  83 revldnirklLkpgGr 98 
                       ++++ +++ L+ gG+
       KHJ31835.1 139 SRFFNGLYASLRRGGK 154
                      8999999999999986 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   1.2e-07   0.00023      57     114 ..      31      87 ..      11     104 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 1.2e-07
                 --HHHHHHHHHHTT--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHH CS
        PCMT  57 SaphmvalalellelkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveea 114
                  + +m  +alell+l+k + +L++G+GsG    +l+   ++++  ++++ ++++ + a
  KHJ31835.1  31 IQVSMTHRALELLNLDKPSLILDIGCGSGLSGEILSSNPEPHM-WIGMDISPSMLDIA 87 
                 4678999***********************9999998776666.66777776666655 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   2.8e-07   0.00055      14     129 ..      40     169 ..      28     181 .. 0.70

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 2.8e-07
  Methyltransf_23  14 erllpklraggrvLdiGcGtGillevlrengf..svtgvDlspeaveiaekakkaqkdqfdeqeaaepqg......kfdlIvlrevlehvpdpp 99 
                      ++ll +l++++ +LdiGcG+G   e+l+ n+     +g+D+sp + +ia     ++++  d +  ++ qg      +fd ++++  + ++ + +
       KHJ31835.1  40 LELL-NLDKPSLILDIGCGSGLSGEILSSNPEphMWIGMDISPSMLDIA----LQRDVEGDLMLMDFGQGvpfragSFDAAISISAIQWLCNAE 128
                      4455.4899999*********9999997775441667**********97....44455555555555444444444888877777777766655 PP

  Methyltransf_23 100 ...........ellrqiatllkpgGylllseplaslkedrl 129
                                 + ++ +++ l+ gG ++++ + ++++++++
       KHJ31835.1 129 ssevssigrlsRFFNGLYASLRRGGKAVCQFYPKNDEQRNM 169
                      55577777777777777777777777777776666666655 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   8.2e-07    0.0016       6      88 ..      50     129 ..      45     173 .. 0.71

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 8.2e-07
  Methyltransf_31   6 rvlDlGCGtGeltfelaeelgpkae.vvGiDiseeaielArenaqklgldnveFeqgdieeleklledekfDlilsnevl....nala 88 
                       +lD+GCG+G  +  l    +p+ +  +G Dis+ ++  A ++  +  l  + F qg     +  +   +fD  +s +++    na +
       KHJ31835.1  50 LILDIGCGSGLSGEILS--SNPEPHmWIGMDISPSMLDIALQRDVEGDLMLMDFGQG----VP--FRAGSFDAAISISAIqwlcNAES 129
                      59*******98888888..56777769***************855555544444443....44..44456777777766665554444 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   6.6e-06     0.013      25     119 ..      27     114 ..      15     127 .. 0.74
   2 ?   -1.6   0.0      0.69   1.4e+03     122     147 ..     177     203 ..     146     219 .. 0.62
   3 ?   -2.7   0.0       1.5   2.9e+03      69      84 ..     244     259 ..     210     272 .. 0.44

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 6.6e-06
                      HHHHTTTHHHHHHHHHHH--S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSSTEEEEE--TTT-TTS-T-EE CS
  Ubie_methyltran  25 dvlslgihrlWkkfveklvavkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegkinieflqanaeeLpfeddsfD 118
                       + s+++    ++   +l +  +++ +lD+ +G+g l+ ++++s  e    +++Di+++mL+++ ++  e   + ++f    ++ +pf  +sfD
       KHJ31835.1  27 RIQSIQVSMTHRA--LELLNLDKPSLILDIGCGSG-LSGEILSSNPEPHMWIGMDISPSMLDIALQRDVEGDLMLMDF----GQGVPFRAGSFD 113
                      5555555544443..45667778999********9.55566666666677889**************99999998888....455788888888 PP

                      E CS
  Ubie_methyltran 119 v 119
                       
       KHJ31835.1 114 A 114
                      5 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.69
                      EES-GGG-S-H.HHHHHHHHHHEEEEE CS
  Ubie_methyltran 122 vsfGlrnvtDk.lkaLkeayrvlkpGG 147
                       +fG   + D  ++  k++y vl +GG
       KHJ31835.1 177 AGFGAGILEDDpETKNKKLYLVLTVGG 203
                      344444444331445566777777776 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1.5
                      HHHHHEEEEEES-HHH CS
  Ubie_methyltran  69 vgekgkvvvlDinenm 84 
                      v++  k  ++  +e m
       KHJ31835.1 244 VKKGSKAWIMKKKERM 259
                      2222233333333333 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   1.5e-05     0.029      41      78 ..      26      63 ..      13     179 .. 0.61

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.5e-05
                --HHHHHHHHHHHHHTTTT--TT-EEEEES-TTSHHHH CS
        CMAS 41 mtLeeAqlaKldlileklelkpGmtlLdiGcGWGslvr 78
                  +++ q + ++++le l+l++ + +LdiGcG G    
  KHJ31835.1 26 SRIQSIQVSMTHRALELLNLDKPSLILDIGCGSGLSGE 63
                56889999999*********************986544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       459  (0.025601); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2217.13
//
Query:       KHJ31836.1  [L=293]
Description: putative proteasome component c1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-43  147.3   0.2    9.4e-31  106.8   0.0    2.4  3  Proteasome      Proteasome subunit
    2.1e-11   43.3   1.1    2.2e-11   43.2   0.0    1.7  2  Proteasome_A_N  Proteasome subunit A N-terminal signature


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.8   0.0     1e-34   9.4e-31       1     117 [.      31     145 ..      31     149 .. 0.98
   2 !   38.3   0.0     1e-13   9.2e-10     116     190 .]     170     245 ..     164     245 .. 0.94
   3 ?   -3.6   0.0      0.71   6.3e+03     161     185 ..     265     289 ..     264     291 .. 0.76

  Alignments for each domain:
  == domain 1  score: 106.8 bits;  conditional E-value: 1e-34
                 HHHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHC CS
  Proteasome   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrs 99 
                 v++G+t++Gik+kdgvvla++k +t  skll++   ++i  +d+hig + +Gl++D+r + +rar+ea+++r  y+ pi++  l++r+ ++lq yt++s
  KHJ31836.1  31 VENGGTSIGIKCKDGVVLAVEKIIT--SKLLKPGANNRIATVDRHIGTVSSGLIPDGRHFEQRAREEASSWRQIYKSPISTADLANRMGQYLQLYTLYS 127
                 689**********************..************************************************************************ PP

                 TTTTTSEEEEEEEEETTT CS
  Proteasome 100 grrpfgvslliagvdeeg 117
                 ++rpfg+ ++iag+d e 
  KHJ31836.1 128 SVRPFGITAIIAGWDSES 145
                 ***************765 PP

  == domain 2  score: 38.3 bits;  conditional E-value: 1e-13
                 TTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHH..STTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEEE CS
  Proteasome 116 eggpeLyqidpsGsyieekdavaiGsgseaaktalekey..kedltleeavelavkalkealerdklsgknievavi 190
                  ggp L++i+psGsy+++ + +a+G+g++ ak+ lek+   +  l+l ++v  a k+++ a+ + k ++ ++e+++i
  KHJ31836.1 170 YGGPGLFMIEPSGSYWGY-YGAATGKGRQTAKAELEKLDlaSGTLSLLDGVNEAAKIIYLAHADNKDKEFELEMTWI 245
                 689***************.8******************999999*******************99999999999886 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 0.71
                 HHHHHHHHHHHHHHHHHBTTSCSSE CS
  Proteasome 161 eeavelavkalkealerdklsgkni 185
                 +ea++la+ al    ++d ++++ +
  KHJ31836.1 265 DEAERLAKGALDGEDDDDDSKSEDV 289
                 8999999999988887777777666 PP

>> Proteasome_A_N  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2   0.0   2.5e-15   2.2e-11       1      23 []       8      30 ..       8      30 .. 0.99
   2 ?   -3.3   0.3      0.89     8e+03      10      13 ..      83      86 ..      83      86 .. 0.95

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 2.5e-15
  Proteasome_A_N  1 YDrslttFSPdGRLfQVEYAmkA 23
                    YD++ ++FSPdGR fQVEYA kA
      KHJ31836.1  8 YDLTNSVFSPDGRNFQVEYAVKA 30
                    **********************9 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 0.89
  Proteasome_A_N 10 PdGR 13
                    PdGR
      KHJ31836.1 83 PDGR 86
                    9**9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.21s 00:00:00.63 Elapsed: 00:00:00.36
# Mc/sec: 2458.61
//
Query:       KHJ31837.1  [L=383]
Description: putative isocitrate dehydrogenase subunit mitochondrial precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-83  281.3   0.1    1.3e-83  281.0   0.1    1.0  1  Iso_dh    Isocitrate/isopropylmalate dehydrogenase


Domain annotation for each model (and alignments):
>> Iso_dh  Isocitrate/isopropylmalate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  281.0   0.1   7.3e-88   1.3e-83       1     348 []      48     375 ..      48     378 .. 0.93

  Alignments for each domain:
  == domain 1  score: 281.0 bits;  conditional E-value: 7.3e-88
                 EEEEEEESTTHHHHHHHHHHHHHHHHHHHT-EEEEEE---THHHH.HHHSSSS-HHHHHHHHHSSEEEEEE---CS.SSSSSHHHHHHHHHHHTTEEEE CS
      Iso_dh   1 kiallegdgiGpevveaalkvlkaakekaglelefeevdvGgaai.detgeplpeetleaikeadvvllgavgtpk.ekevrpengLlaLrkeldlfan 97 
                 +++l++gdgiG e+v++++ ++ka +      +e+e+vdv g  + ++  e l  e+++++k+++  l+g + tp  ++++++ n  +a+r+eld++a 
  KHJ31837.1  48 TVTLIPGDGIGAEIVDSVKTIFKADN--V--PIEWEQVDVTGVETgEKNSEDLFRESIASLKRNKLGLKGILHTPIeRSGHQSFN--VAMRQELDIYAS 140
                 589********************988..5..59******977665156669************************98899*****..************ PP

                 EEEEE-BCCTTCCSSBTHHHHCT-EEEEEEE-SSCGGCSSEEEEETTG.GGGEEEEEEEEEHHHHHHHHHHHHHHHHHTTTSEEEEEESTTTTHHHH.H CS
      Iso_dh  98 lrpvkvfeklkvksplkrevveevdlvivReltggiYfgeekekkgsifteevavdtklyseeeieriaraafelAlkrgkkkvtlvdKanvlksse.l 195
                 +  vk ++  ++  + ++   ++vdl+i+Re+t+g Y+g e++         v+ ++k ++++ +eria++af+ Al++++kkvt+++Kan++k ++ l
  KHJ31837.1 141 IALVKNIP--GY--ITRH---QNVDLCIIRENTEGEYSGLEHQSVPG-----VVESLKIITRTKSERIAKFAFAFALANNRKKVTCIHKANIMKLADgL 227
                 **999993..33..3343...67**********************97.....899******************************************** PP

                 HHHHHHHHHCCTTTTSEEEEEEHHHHHHHHHHSGGGGSEEEE-HHHHHHHHHHHHHHTTSGCC-EEEEEETSS-EEEEE.SS---CCCTTSS-S-THHH CS
      Iso_dh 196 wrkiveevaeeeypdielehqlvDsaamqlvkspkqfdVivtkNlfGDilSDeaaalvGslGllpSaslgekkvaifEa.vHGsapdiagkdkaNpiav 293
                 +r++++ +a+ +yp +e+++++vD+a mq v +p+qfdV+v++Nl+G ilS + aalvG+ G++p+ ++g ++va+fE+ +     di gk++aNp+a+
  KHJ31837.1 228 FRNTFKTIAQ-DYPTLEVNDMIVDNASMQCVSRPQQFDVMVMPNLYGGILSNVGAALVGGPGVVPGCNMG-REVAVFEPgCRHVGLDIKGKHQANPVAM 324
                 *********9.***********************************************************.79*****95455667************* PP

                 HHHHHHHHHHTTT-HHHHHHHHHHHHHHHHH.TSCCHHHCTTSTCCCHHHHHHHHH CS
      Iso_dh 294 ilSaalmLryslgleeaAdkiekAvekvlea.givTkDlageaakevstsefgdav 348
                 ilS +++Lr+ lgl+e+A++i kAv +v+++ +++T+D++g++    st+e++ a+
  KHJ31837.1 325 ILSGSMLLRH-LGLDEHANRISKAVYDVIADgKVRTRDMGGNN----STTEITRAI 375
                 **********.********************899*********....777777654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       432  (0.024095); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2826.88
//
Query:       KHJ31838.1  [L=199]
Description: putative g-patch rna maturation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.5e-07   31.2   0.2    1.1e-06   28.5   0.2    2.3  1  G-patch    G-patch domain
     0.0065   16.5   1.9     0.0082   16.2   0.0    2.1  2  G-patch_2  G-patch domain


Domain annotation for each model (and alignments):
>> G-patch  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.2   1.2e-10   1.1e-06       3      45 .]      27      77 ..      25      77 .. 0.92

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 1.2e-10
     G-patch  3 niGvkmLqkmGWkpGqGLG........kkeqGiaePieakikkdraGlGak 45
                ++G+kmL ++GWk+G+ LG         + + ++++i++++k+d+ GlGak
  KHJ31838.1 27 SFGHKMLTSQGWKKGELLGaknaahaeFHTSANSSHIRVTFKDDNLGLGAK 77
                89*****************8888888778899999**************97 PP

>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   9.1e-07    0.0082      14      58 ..      25      77 ..      24      79 .. 0.89
   2 ?   -2.9   0.4      0.86   7.7e+03      34      47 ..     185     191 ..     179     196 .. 0.39

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 9.1e-07
   G-patch_2 14 VeeFGaAlLrGMGWkegqgigknkkgr........vkpeepkrRpgrlGLGak 58
                V +FG  +L   GWk+g+  g ++  +           + ++ + + lGLGak
  KHJ31838.1 25 VQSFGHKMLTSQGWKKGELLGAKNAAHaefhtsanSSHIRVTFKDDNLGLGAK 77
                789********************998899998887777778888889****98 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.86
   G-patch_2  34 gknkkgrvkpeepk 47 
                 +k+kk+       k
  KHJ31838.1 185 KKSKKS-------K 191
                 222222.......2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       924  (0.0515366); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1589.72
//
Query:       KHJ31839.1  [L=206]
Description: hypothetical protein EV44_g2558 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.055   13.3   0.2      0.097   12.5   0.2    1.3  1  KdpC      K+-transporting ATPase, c chain
       0.16   11.1   0.2       0.14   11.2   0.2    1.2  1  AC_N      Adenylyl cyclase N-terminal extracellular and trans


Domain annotation for each model (and alignments):
>> KdpC  K+-transporting ATPase, c chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   1.1e-05     0.097      44     109 ..     120     188 ..     106     195 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.1e-05
                 TEEEEETTT------SSS--------S...T-TTT-------SS-HHHHHHHHHHHHHHHHH-TTS..- CS
        KdpC  44 gkvvGseligqeftsdkYfhgRpsavn...ynaaasggsnlgpsnpellerveervaalraenpekkke 109
                 g+  Gs   g  f+ +++f  R  +      ++  sg+sn + +n++l +++e r +++ +  p  ++e
  KHJ31839.1 120 GHSPGSFGEGNYFSFPEHFRLRAESSVtqsQKPHFSGSSNSARNNAALHTQTEMRPQSVDSPAPIRAQE 188
                 777788888999999*******87665466779********************9999988776666555 PP

>> AC_N  Adenylyl cyclase N-terminal extracellular and transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   1.6e-05      0.14      92     130 ..     142     180 ..      29     202 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 1.6e-05
        AC_N  92 geesrrqrsrap.pagdkpesaaaaakreegevrprsvel 130
                  e s  q s++p  +g+++++ ++aa ++++e+rp+sv+ 
  KHJ31839.1 142 AESSVTQ-SQKPhFSGSSNSARNNAALHTQTEMRPQSVDS 180
                 3333334.5555156777788889999***********85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      273  (0.0152267); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1772.12
//
Query:       KHJ31840.1  [L=142]
Description: hypothetical protein EV44_g5289 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.021   14.9   1.9      0.051   13.7   2.0    1.6  1  DUF5595       Domain of unknown function (DUF5595)
       0.03   14.6   2.2      0.038   14.3   2.2    1.2  1  FANCI_S2      FANCI solenoid 2
      0.036   14.1   2.2      0.043   13.8   0.1    2.1  2  Adhesin_P1_N  Adhesin P1 N-terminal domain


Domain annotation for each model (and alignments):
>> DUF5595  Domain of unknown function (DUF5595)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   2.0   8.5e-06     0.051      28      59 ..      53      84 ..      51     100 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 8.5e-06
     DUF5595 28 eDtFeeedaeleskLkelynvdeaqlesleee 59
                eD+F+ ++ el++k+++l++  +a +++l+ +
  KHJ31840.1 53 EDDFNKQESELNVKIEKLFELRQAAVAKLQND 84
                8****************************975 PP

>> FANCI_S2  FANCI solenoid 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   2.2   6.3e-06     0.038      27     152 ..      16     133 ..       1     136 [. 0.74

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6.3e-06
    FANCI_S2  27 aeasaaksktvaqaaaklgsqiLlelfkvhesarseiieqllsriitkseeevsqyiklLselvksapltllesssk.lkelldylsflpletatallk 124
                  e++++++++ ++ + +++ +i+  + + +++ r+ i + + +     +e+e +  i+ L el ++a+++l++ + + l+ l + l+f++++    +l+
  KHJ31840.1  16 NENKQSSAQDDNRDVIEIAHRIVRDTKNIRNKKRKGIEDDFNK-----QESELNVKIEKLFELRQAAVAKLQNDAWEkLEALNEKLQFIEGS----ILT 105
                 3344555666777777777777777777777777777666543.....33335666888999*********987654499999******996....788 PP

    FANCI_S2 125 AllPLlkvseslrdalilvLRKalfsre 152
                 ++  L  ++ +++ ++ilvLRK++++++
  KHJ31840.1 106 SMTNLEFATLNMTKQMILVLRKSIHNHQ 133
                 889999999***************9987 PP

>> Adhesin_P1_N  Adhesin P1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.2      0.42   2.5e+03      32      46 ..      12      26 ..       7      34 .. 0.74
   2 ?   13.8   0.1   7.1e-06     0.043      32      59 ..      41      68 ..      38      72 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.42
  Adhesin_P1_N 32 taeeadaKkaeIkaD 46
                  ++++ ++K++  ++D
    KHJ31840.1 12 SDSDNENKQSSAQDD 26
                  566777888888887 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 7.1e-06
  Adhesin_P1_N 32 taeeadaKkaeIkaDYnkQakeikaatd 59
                  t++  ++K++ I++D+nkQ++e++ +++
    KHJ31840.1 41 TKNIRNKKRKGIEDDFNKQESELNVKIE 68
                  5666789****************98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1591  (0.0887389); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1053.58
//
Query:       KHJ31841.1  [L=453]
Description: putative homocysteine s-methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-48  164.8   0.0    3.2e-47  161.6   0.0    2.0  1  S-methyl_trans  Homocysteine S-methyltransferase


Domain annotation for each model (and alignments):
>> S-methyl_trans  Homocysteine S-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.6   0.0   1.8e-51   3.2e-47       2     266 ..       9     449 ..       8     451 .. 0.77

  Alignments for each domain:
  == domain 1  score: 161.6 bits;  conditional E-value: 1.8e-51
                     EB---SHHHHHHT..----ST..THHCCHHH-HH...HHHHHHHHHHHHT-SEEE-TTTT--.............GG.T--HHHHH.HHHHHHHH CS
  S-methyl_trans   2 ilDGgmgteLerr..adlsee..lwsaelltrpe...likeihrdyleaGadiieTnTyqas.............kikgleeeeeveelnraave 76 
                      lDGg+gt+L ++  ++ +++  lws++ll++p+   +++++h +++eaGad+i+++Tyqas             +           + nr++ +
      KHJ31841.1   9 FLDGGLGTTLVDKfgCKFDDStpLWSSQLLLSPSgnrVLQKCHIAFVEAGADLITSATYQAStrefinflnkgeeS-----------KCNRNSSH 92 
                     59********9888955555555*******9885555*************************66555444444440...........55555555 PP

                     HHHHHHHHH.........H........................................................EEEEE--HHHHCTS.....- CS
  S-methyl_trans  77 lareaadeaaa.....plf........................................................vagsvGpygatlsd.....g 105
                     + ++ ad  ++     p                                                          v++ +G  ga+l++     g
      KHJ31841.1  93 VDKDYADTERSkegkeP-NeilqlapdalennrkveleeqdhkfrknsmatvqahrkmrnaiklarssfggkqgkVVLGLGAAGACLKPsqeytG 186
                     55555554322333330.023334444444444455555555556666666667777777777778888888888**************877775 PP

                     .--.....--HHHHHHHHHHHHH.H............................HHHCT-SEEEEEEE--HHHHHHHHHHHT.............. CS
  S-methyl_trans 106 .yd...l.lsfeelveahreqir.a............................lleagvDlllietipdlleakaavellaa............. 153
                      y    + +s + ++++h e+++ +                             + +++Dl+ +et+p l+e++a++e++a+             
      KHJ31841.1 187 nYAgseFgTSISSIRKWHFERLSvFiydkeedffdklvtadnnlgnfkkssyyNCWNDIDLVGFETLPLLQEIIAVREAMAEvheystrnylsni 281
                     56466558***************669**********99999999999988888799************************999999999999999 PP

                     ................T...--EEEEE-ECCT..TETTS-BHHH.HHHHHCT-....TEEEEEEES--GGGHHHHHHHH...........HTT-- CS
  S-methyl_trans 154 ................e...lpvwisftikdes.tlrsGetleeavaalaaat....qplavgvNCakpeelepllkel...........kseta 213
                                     e   + +wis+++ +e+ +l++G++++e++++++  +    +p++vg+NC+++++le l++++           +   +
      KHJ31841.1 282 latpasdtstarvsskEvarKDFWISCVFPNEEyNLPDGSSITEVLRSMLCVRekaeTPMGVGINCTSVRKLEGLIQNYenaitemiskgE-IEN 375
                     8888888777766655145577*******766667**************988888866799******************888888887531.222 PP

                     S-...EEEE---..S-----------....-...................HHHTTEE....EE---TT--HHHHHHHHH CS
  S-methyl_trans 214 lpa..vivypns.agevydltpeewaesaee...................wleagan....iiGGCCgttpehIraiae 266
                       +  ++vyp++ +ge y+++++ w+++  +                        a+      GGCC+ttp++I++++ 
      KHJ31841.1 376 --WpsLFVYPDGtNGEIYNTETHNWETKKVSnfnssswdemmydivkraqH---RAAwksiYAGGCCKTTPDDIKKLRS 449
                     ..24489****889************8766699999988877776543331...22245545**************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3171.73
//
Query:       KHJ31842.1  [L=912]
Description: putative trehalose phosphate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   5.3e-161  536.5   0.6     8e-161  535.9   0.6    1.2  1  Glyco_transf_20  Glycosyltransferase family 20
    2.7e-39  134.7   0.0    4.7e-39  133.9   0.0    1.4  1  Trehalose_PPase  Trehalose-phosphatase
  ------ inclusion threshold ------
      0.011   15.5   0.1       0.08   12.7   0.1    2.2  1  Hydrolase_3      haloacid dehalogenase-like hydrolase
      0.098   12.6   0.5         17    5.4   0.1    2.7  2  Sushi_2          Beta-2-glycoprotein-1 fifth domain
       0.19   12.2   0.4       0.38   11.2   0.4    1.5  1  Sperm_Ag_HE2     Sperm antigen HE2


Domain annotation for each model (and alignments):
>> Glyco_transf_20  Glycosyltransferase family 20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  535.9   0.6  2.2e-164    8e-161      27     473 ..     169     619 ..     148     620 .. 0.95

  Alignments for each domain:
  == domain 1  score: 535.9 bits;  conditional E-value: 2.2e-164
                      ECCGSSHHHHHCCCHHCC...C-EEEEEEECCES-CCC....HCCCCHHHCCCCCEEEEEE-HHHHHHHCCCHHHHCHHHHHTT-GG....G-- CS
  Glyco_transf_20  27 lkkssgglvsalkglkee...tevvwvgwlgvevdesee..akekvskeleekfsvvpvflsdekveeyyngfsksvLWpllHYklpdsseeke 115
                       ++ +ggl +a+++++++    + +wvg+lg+++d+ e   +k++++++l  ++++++vf +d ++  +y ++sk++LWp+lHY++pd++++k+
       KHJ31842.1 169 ADQGNGGLRNAVQAAERAgkvSDKTWVGTLGMPTDAFEGtqQKQEIEDKLAMEYDSITVFCKDSDFSGHYTHYSKQILWPVLHYQIPDTPKSKA 262
                      344455555555555555655666***********999877899999*********************************************** PP

                      --HHHHHHHHHHHHHHHHHHHCC--TT-EEEEESGGGTTHHHHHHHCCTTSEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHH CS
  Glyco_transf_20 116 fersawdaYvkvnklFAdkiveeikdgdliwvhDYhLmllPellRkkledakigfflHiPFPsseifriLpvreeilegllgadliGFhtedya 209
                      +e+++w  Yvkvn++FAdkiv++ k +d+iw+hDY+L+l+P+++Rk+l++akigfflH++FPsse+fr+L+ r+e+leg+lga+liG+++++ya
       KHJ31842.1 263 YEDHSWVYYVKVNQAFADKIVKNWKRDDVIWIHDYNLLLVPQMIRKQLPNAKIGFFLHVSFPSSEVFRCLAARKELLEGMLGANLIGYQIQEYA 356
                      ********************************************************************************************** PP

                      HHHHHHHHHHSSEEEECTTEEEEETTEEEEEEE------HHHHHHHCCSCHHHHHHHHHHHHT.TTSEEEEEEEEC-GGG-HHHHHHHHHHHHH CS
  Glyco_transf_20 210 rhFlsccsrllgleveskrggveykgrkvsvkalpigidverlesalkkesvsekvkelkerfenkkklilgvDrlDyikGvkqkllaferfLe 303
                      rhFl++csr+l +e++++  g+++++r v+v +l+igid+ +l+ +  +++v ++vk ++er+++k kli+ +D+lD ++Gv+ klla+e fL+
       KHJ31842.1 357 RHFLQTCSRILCVEATNE--GIQLEDRFVDVFSLAIGIDPIALNLSRTDPEVLQWVKIMQERYRGK-KLIVARDKLDHVRGVRPKLLAYELFLN 447
                      *****************9..8******************************************996.*************************** PP

                      H-GGGTTTEEEEEEEEB-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEEES---HHHHHHHHHH-SEEEE--SSBSS-CHHHHHHHCST CS
  Glyco_transf_20 304 eypelrgkvvlvqiavpsredveeyqelekeveelvgrINgefgtldytPvvylersldfeeliallaaadvllvtslRdGmnlvakeyvvcqq 397
                      +ype+r++vv++q+a+++ e+ e    l + v+++v+r+N+ +++l ++P++yl+++++f++++all++ad+l++ts R+Gmnl+++e+v cq+
       KHJ31842.1 448 KYPEWRENVVMIQVATSTTEQAE----LDAAVSDIVTRVNSSWANLAHQPLIYLKQDISFAQYLALLSVADALMITSQREGMNLTCHEFVFCQD 537
                      ********************999....******************************************************************* PP

                      T......T--EEEEETTBGGGGT-TTTSEEE-TT-HHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHH CS
  Glyco_transf_20 398 e......kkgvLiLSeFaGaaqsLkdaailvNPwdieevaeaikeaLkmseeerkkrekkllkqvskhdvqsWaesflselk 473
                      +      k+g LiLSeF+G++++   + + vNPw+++++aeaik+aL m+eee+k r+++l+k+v +h++++W +sfl++l 
       KHJ31842.1 538 GkvegqnKNGCLILSEFTGSSSVFGGNDLSVNPWNYHQCAEAIKTALVMDEEEKKWRWENLYKAVMHHTAEHWYTSFLDRLD 619
                      99****9***********************************************************************9986 PP

>> Trehalose_PPase  Trehalose-phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.9   0.0   1.3e-42   4.7e-39       1     230 [.     654     895 ..     654     897 .. 0.91

  Alignments for each domain:
  == domain 1  score: 133.9 bits;  conditional E-value: 1.3e-42
                      EEETBTTTB---SSGGG-.-B-TTHHHHHHHHHTTS-..EEEE-SS-HHH.HHHHH---SSEEEEGGGTEEE-TT--EEE-HHHHTTH.HHHHH CS
  Trehalose_PPase   1 flDydGTlspivedpdaa.vpssellslLkkLasdpknvvaivSGrslke.eellvkvpelglaaeHGaeirspsgedwenqaevedl.ewlke 91 
                      +lDy+GTl+++ + +d   + ++++l++L+++ +d +n+v+++S r  +e  +l+ +vp++gl+ae+G++i+  ++++w ++a  +++ +w+++
       KHJ31842.1 654 ILDYEGTLVNWGSIKDTIlTNPQRTLDVLNDVLQDERNIVYVMSDRRPEElDQLFKRVPNIGLIAENGCYIKMYDSSNWIEEADPQEMqKWKNS 747
                      59***********8766426789***************************9999***************************999888846**** PP

                      HHHHHHHHHTTSTT-EEEEETTEEEEE-TT--TT.....THHHHHHHHHHHHHHH.--EEEE-SSEEEEE-S---HHHHHHHHHHTS---.... CS
  Trehalose_PPase  92 vkeileektertpGsyiEekkfalsvHyrnadde...elqakelaehlesvltdkpdlevtqgkkvvevrpqgvsKGkaverlleslgsa.... 178
                      v+ i++++ er+pGs iE++ + l++Hy+ ++d+   +  a ++  h +++ +++  +++      v v p++ sK  a+e +l++l s+    
       KHJ31842.1 748 VEGIMQYYNERVPGSWIEDRSCRLIFHYKTCEDQesaNRLAGDCVGHINDACEEQ-HVRAIPIDGAVVVEPSYWSKATAAETVLNKLTSKyfqq 840
                      **********************************643333456666777766666.99************************************ PP

                      ...-----EEEEEE-SSTTHHHHTTS-TT...-EEEEE--TTS---EES-SEEES CS
  Trehalose_PPase 179 ...dseddfvlciGDdrtDedmFsvlrktkesgvsievsavevgskpskakysld 230
                         + ++df ++iG  r De  F++ ++ ++ ++  +v +v+ g+++++a y+l+
       KHJ31842.1 841 sdqNIKIDFLMVIGVNRNDEVIFRWANELHHRNIIENVTTVSLGRRNTEAGYTLT 895
                      *****************************89999999999999********9987 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   2.2e-05      0.08       2      92 ..     654     756 ..     653     869 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.2e-05
                  EEEIIIIIS-....TTS---..HHHHHHHHH.HHHTTSEEEEE-SS-HHHHHHHHHHCCCCSEEEEGGGTEE..ECTTTEEEEE--B-....HHHHHH CS
  Hydrolase_3   2 alDlDGTLln....sdkkis..ektkeaikk.lkekgikvviATGRslravlpvleelgldlpvialNGali..ddekgkilykstis....kedvke 86 
                  +lD  GTL+n    +d  ++  ++t ++++  l+++   v + + R ++++ ++++ +  +  +ia NG++i  +d+++ i  +++ +    k+ v+ 
   KHJ31842.1 654 ILDYEGTLVNwgsiKDTILTnpQRTLDVLNDvLQDERNIVYVMSDRRPEELDQLFKRVP-NIGLIAENGCYIkmYDSSNWIEEADPQEmqkwKNSVEG 750
                  6788899999776533332224888888876245677788899*************999.789*********75555555555544444455555555 PP

                  HHHHHH CS
  Hydrolase_3  87 iikllk 92 
                  i+++ +
   KHJ31842.1 751 IMQYYN 756
                  555554 PP

>> Sushi_2  Beta-2-glycoprotein-1 fifth domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.1    0.0047        17      23      52 ..     212     241 ..     205     270 .. 0.85
   2 ?    4.6   0.1    0.0085        31       3      35 ..     575     607 ..     573     616 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0047
     Sushi_2  23 edllknrvlHgekvsffCknkekkCsytve 52 
                 ++ +++  +  + +++fCk+++ +  yt  
  KHJ31842.1 212 QEIEDKLAMEYDSITVFCKDSDFSGHYTHY 241
                 66777778889***********99999875 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0085
     Sushi_2   3 sCkipvkrarvlykgekvkiedllknrvlHgek 35 
                 +C   +k a v+ ++ek++  ++l + v+H   
  KHJ31842.1 575 QCAEAIKTALVMDEEEKKWRWENLYKAVMHHTA 607
                 69999**************99999999888755 PP

>> Sperm_Ag_HE2  Sperm antigen HE2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.4   0.00011      0.38      19      69 ..      20      70 ..       3      71 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00011
  Sperm_Ag_HE2 19 SrassvnhqategprelreespgqgtngsqllhhqvkrylLPPRtPpyeep 69
                  S+ ++ n++    p+ + e s  ++++ sq       ++l PPR P ++++
    KHJ31842.1 20 SHSQHENQKTSPTPKASLEISKSRNSSLSQSSLFTKDEELTPPRSPNFQGN 70
                  7788889999999***************99999999999*********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (912 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.70u 0.24s 00:00:00.94 Elapsed: 00:00:00.41
# Mc/sec: 6616.59
//
Query:       KHJ31843.1  [L=489]
Description: putative pachytene checkpoint component pch2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-27   96.5   0.0    3.3e-27   95.5   0.0    1.6  1  AAA             ATPase family associated with various cellula
    2.4e-06   28.0   0.1    1.2e-05   25.8   0.0    2.2  2  AAA_16          AAA ATPase domain
    2.8e-05   24.4   0.0    9.9e-05   22.7   0.0    2.0  1  RNA_helicase    RNA helicase
    2.9e-05   24.4   0.9    8.2e-05   22.9   0.1    2.2  2  AAA_22          AAA domain
    0.00013   22.5   0.0    0.00029   21.4   0.0    1.7  1  AAA_18          AAA domain
    0.00029   20.9   0.3      0.002   18.2   0.0    2.3  2  AAA_14          AAA domain
    0.00069   19.4   0.0     0.0013   18.5   0.0    1.5  1  AAA_24          AAA domain
    0.00077   19.4   0.1     0.0058   16.6   0.1    2.3  1  NACHT           NACHT domain
     0.0011   19.0   1.2      0.066   13.1   0.0    2.6  3  ATPase_2        ATPase domain predominantly from Archaea
     0.0015   18.7   0.0     0.0027   17.8   0.0    1.4  1  AAA_33          AAA domain
     0.0028   17.8   0.0     0.0086   16.2   0.0    1.8  1  AAA_2           AAA domain (Cdc48 subfamily)
      0.003   17.3   0.0     0.0071   16.1   0.0    1.6  1  Cytidylate_kin  Cytidylate kinase
     0.0035   17.4   0.0     0.0085   16.1   0.0    1.6  1  TsaE            Threonylcarbamoyl adenosine biosynthesis prot
     0.0039   16.9   0.0     0.0075   16.0   0.0    1.5  1  RuvB_N          Holliday junction DNA helicase RuvB P-loop do
     0.0042   17.1   0.0      0.011   15.7   0.0    1.8  1  AAA_5           AAA domain (dynein-related subfamily)
      0.008   15.4   0.2       0.15   11.2   0.0    2.6  2  DUF815          Protein of unknown function (DUF815)
  ------ inclusion threshold ------
      0.014   15.8   0.3        0.1   13.0   0.1    2.2  2  AAA_17          AAA domain
       0.02   14.4   0.0      0.035   13.6   0.0    1.4  1  KTI12           Chromatin associated protein KTI12
      0.027   14.2   0.0       0.06   13.1   0.0    1.5  1  PduV-EutP       Ethanolamine utilisation - propanediol utilis
      0.031   13.4   0.1        1.9    7.6   0.0    2.3  2  NB-ARC          NB-ARC domain
      0.037   13.8   0.0       0.15   11.8   0.0    2.0  2  IstB_IS21       IstB-like ATP binding protein
      0.044   14.3   0.1       0.14   12.7   0.0    1.8  2  ABC_tran        ABC transporter
      0.045   14.0   0.0      0.084   13.1   0.0    1.5  1  AAA_28          AAA domain
      0.048   12.3   1.0      0.085   11.5   0.0    1.7  2  AAA_13          AAA domain
      0.049   13.4   0.0      0.095   12.5   0.0    1.4  1  AAA_11          AAA domain
      0.072   13.2   0.0       0.17   12.0   0.0    1.8  1  MMR_HSR1        50S ribosome-binding GTPase
       0.14   12.1   0.1        3.3    7.6   0.0    2.3  2  RsgA_GTPase     RsgA GTPase
       0.19   11.3   0.0       0.48   10.0   0.0    1.6  2  AAA_25          AAA domain
        1.5    9.2   5.3       0.59   10.6   0.1    2.7  2  AAA_23          AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.5   0.0   5.3e-30   3.3e-27       1     128 [.     167     310 ..     167     314 .. 0.88

  Alignments for each domain:
  == domain 1  score: 95.5 bits;  conditional E-value: 5.3e-30
                 EEEESSTTSSHHHHHHHHHHHH.........THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS.....TSEEEEEETGGGHHHHH....TTCCCHH CS
         AAA   1 vllyGppGtGKTllakavakel.........gvefleisgsellskyvgesekkirelfkeakeka.....kpsilfiDEidalaksr....sgsesee 81 
                 +llyGppG GKT+l++ +a+++         +++f++i+ ++llsky +es++++ e+f+++ +       +  +++iDE++++a+sr    +++es++
  KHJ31843.1 167 ILLYGPPGSGKTSLCRGLAQKAsirlntiytQTRFIQIKTATLLSKYYSESARQVDEIFTKITQICtqnpdEFICVLIDEVESIASSRefsiKSGESQD 265
                 69*******************8444433333477***************************966556668556******************9999**** PP

                 HHHHHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHHHSTTSSEEE CS
         AAA  82 eervvnqLlteldgvkkkeskvivigatnrpdkldpallrgRfdrki 128
                 + r+ n+Llt ld+ k + s+vi++ ++n ++ ld a++ +R+  k 
  KHJ31843.1 266 SLRATNALLTGLDRTKMN-SNVIFLFTSNMYEALDIAFI-DRCGLKC 310
                 ****************96.77******************.**98776 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       5.4   3.4e+03      72     134 ..      41      61 ..       3      83 .. 0.55
   2 !   25.8   0.0   1.9e-08   1.2e-05      24      75 ..     160     220 ..     142     289 .. 0.62

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 5.4
      AAA_16  72 laqalareellrqlldeaesaeleawrekleealaavpelagaeasrllellkrllallsrde 134
                   +                                          +  +ell ++l+ ++++e
  KHJ31843.1  41 SSE------------------------------------------NITFELLEDILDDTQNGE 61 
                 223..........................................333333333334433333 PP

  == domain 2  score: 25.8 bits;  conditional E-value: 1.9e-08
      AAA_16  24 p....elvllsGesGvGKsslvrellralekd.ggiflrgkcdqlesaipy....salaqa 75 
                      +l+ll+G++G+GK+sl r l++ ++ + + i++++++ q ++a+ +    s  a++
  KHJ31843.1 160 IgemnPLILLYGPPGSGKTSLCRGLAQKASIRlNTIYTQTRFIQIKTATLLskyySESARQ 220
                 4445799*******************98888865777777777775553332222112222 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   1.6e-07   9.9e-05       1      73 [.     167     240 ..     167     258 .. 0.87

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 1.6e-07
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqevvvidDfgqvkdee.npsdlael 73 
                   i+lyGp+g GK++l++ La++ + +l+++ +++ +++ ++ + +++Y ++ +  +d++  + ++  +++  +++
    KHJ31843.1 167 ILLYGPPGSGKTSLCRGLAQKASIRLNTIYTQTRFIQIKTATLLSKYYSESARQVDEIFTKITQIcTQNPDEFI 240
                   789***************************999999*********************99998887777643444 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       6.8   4.2e+03      56      80 ..      49      69 ..      28      81 .. 0.44
   2 !   22.9   0.1   1.3e-07   8.2e-05       7     105 ..     166     253 ..     162     298 .. 0.65

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 6.8
      AAA_22 56 llrellralglelkaerlsseelle 80
                ll+++l +++   ++ ++++  l++
  KHJ31843.1 49 LLEDILDDTQ---NG-EHKLGSLYQ 69
                2222222222...22.333444444 PP

  == domain 2  score: 22.9 bits;  conditional E-value: 1.3e-07
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst...sskdllrellralglelkaerlsseellealeqalrarav.ielliiDEaq 101
                 +++++G++G+GKT l+r l++++ +         ++ +++ +      + ++ll++  ++      +   + +e++++++q + +  +   +++iDE++
  KHJ31843.1 166 LILLYGPPGSGKTSLCRGLAQKASI---------RLNTIYTQTRFiqiKTATLLSKYYSESA----R---QVDEIFTKITQICTQNPDeFICVLIDEVE 248
                 799*******************954.........4444444443322334444444444444....3...67778888888888887777777788888 PP

      AAA_22 102 hlr.s 105
                  +  s
  KHJ31843.1 249 SIAsS 253
                 77642 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   4.6e-07   0.00029       1      32 [.     167     196 ..     167     293 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 4.6e-07
      AAA_18   1 IlltGtpGvGKttlakeLskrlgfgvnlrdva 32 
                 Ill G+pG+GKt+l++ L+++   +++l+ + 
  KHJ31843.1 167 ILLYGPPGSGKTSLCRGLAQKA--SIRLNTIY 196
                 99****************9997..44444433 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   3.2e-06     0.002       3      79 ..     165     253 ..     163     294 .. 0.71
   2 ?   -0.1   0.1       1.5   9.1e+02      54      86 ..     438     471 ..     410     482 .. 0.60

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 3.2e-06
      AAA_14   3 kilvitGaRrvGKTtllkqlikell......vkkesilyinldderdkkladpe.kllelileklke......ekktylflDEiqevpew 79 
                 +++++ G+  +GKT l++ l+++         ++ +++ i+  +   k +++++ +++e++ +  ++      ++  ++++DE+  + + 
  KHJ31843.1 165 PLILLYGPPGSGKTSLCRGLAQKASirlntiYTQTRFIQIKTATLLSKYYSESArQVDEIFTKI-TQictqnpDEFICVLIDEVESIASS 253
                 67999****************9999777776566666666666655544444333444444443.2223346678889******998554 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.5
      AAA_14  54 elilek.lkeekktylflDEiqevpewekalksl 86 
                 +l  +  +++++k  l+lD i  ++ + k+ k +
  KHJ31843.1 438 DLGVKInMERKRKFRLILDDICDSQAADKYRKAI 471
                 3333332223577889999998777776665555 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   2.1e-06    0.0013       3      78 ..     165     251 ..     163     272 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 2.1e-06
      AAA_24   3 lkiliyGpsgiGKTtlakelgpkplfidtekGlksldadkfpdie...........swedfldevvel.aaeladyktlviDtidele 78 
                   il+yGp+g+GKT+l++ l  + + i ++  + ++ ++++++++           +++++  +++++  ++++++  + iD ++ + 
  KHJ31843.1 165 PLILLYGPPGSGKTSLCRGL-AQKASIRLNTIYTQTRFIQIKTATllskyysesarQVDEIFTKITQIcTQNPDEFICVLIDEVESIA 251
                 569*****************.9999999999888888888888878888555555555555555555599999999999999998775 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   9.4e-06    0.0058       2     127 ..     166     292 ..     165     301 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 9.4e-06
                 CEEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEETTTTTTS-...-HCHHHCCCCTS--SSS-C...CHHHHCCS.CCCEE.EEEE-STT-SS CS
       NACHT   2 lvilqGeaGsGKTtLlqklalawaegklpqgafklvFflslrelsrsgnarsladllfsqlpepaapvse...vwavllel.perlL.lilDglDelvt 95 
                 l++l G++GsGKT L ++la+++  +  +       ++ + r ++        a+ll + + e+a++v+e   +++ ++++ p+     ++D ++ +++
  KHJ31843.1 166 LILLYGPPGSGKTSLCRGLAQKASIRL-NT------IYTQTRFIQI-----KTATLLSKYYSESARQVDEiftKITQICTQnPDEFIcVLIDEVESIAS 252
                 5899***************99976543.33......4544444444.....346899999999999999955533333333133333688899999888 PP

                 -TCH.................HHHHHCTTTTT--EEEEEE CS
       NACHT  96 dlgq........kekqpvrtlLselirkkllpeasllltv 127
                   ++        +  ++++ lL++l r k+ +++ +l t+
  KHJ31843.1 253 SREFsiksgesqDSLRATNALLTGLDRTKMNSNVIFLFTS 292
                 7777888877755556666777777776666666666665 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.0   0.00011     0.066      18      44 ..     162     188 ..     154     199 .. 0.82
   2 ?    3.5   0.1      0.09        56      84     131 ..     202     251 ..     190     260 .. 0.67
   3 ?   -2.3   0.1       5.3   3.3e+03     101     127 ..     431     458 ..     382     474 .. 0.61

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00011
    ATPase_2  18 epneiyfiYGpegsGKtaLlkeiienl 44 
                 e n+ +++YGp gsGKt+L + ++++ 
  KHJ31843.1 162 EMNPLILLYGPPGSGKTSLCRGLAQKA 188
                 568999**************9988775 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.09
    ATPase_2  84 iavpkaeleeilk.eksklvfkaielllekikkkgkk.iiiiiDelqkli 131
                 i++++a+l   +  e  ++v++ ++++ +  +++  + i ++iDe+  + 
  KHJ31843.1 202 IQIKTATLLSKYYsESARQVDEIFTKITQICTQNPDEfICVLIDEVESIA 251
                 45555555222223666666666666666666666669********9987 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 5.3
    ATPase_2 101 lvfkaielllekikkkgkk.iiiiiDel 127
                 + + a+ +l  ki+ ++k+   +i+D++
  KHJ31843.1 431 KKKVAVHDLGVKINMERKRkFRLILDDI 458
                 2244455555555554444455666665 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   4.4e-06    0.0027       1      66 [.     166     232 ..     166     246 .. 0.60

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 4.4e-06
      AAA_33   1 lvllvGlpGsGKstlaerllkklgavllssdtlrrrlfg..tdqqsktdytrvldrlyqilnelarka 66 
                 l+ll G+pGsGK+ l ++l++k + ++l++ +  +r     t     ++y++ + ++ +i  ++ +++
  KHJ31843.1 166 LILLYGPPGSGKTSLCRGLAQK-ASIRLNTIYTQTRFIQikTATLLSKYYSESARQVDEIFTKITQIC 232
                 799*****************66.455555444333333322222222355555555555555555555 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.4e-05    0.0086       6     109 ..     167     283 ..     164     302 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.4e-05
                 EEEE--TTSSHHHHHHHHHHHTT-.........-EEEEEGGG---..----THHHHHHHHHTTT-HHHHTTS..EEEEETGGG----..---------H CS
       AAA_2   6 illlgptgvGktelakalaellfv.....kkekkliradaselle..eeevehlvsrligappgyvgaeegG..ivllDEidKihpk..essgadvSre 93 
                 ill gp g+Gkt l + la+  ++      ++ ++i +   +ll     e+++ v++   + + +  ++ +    vl+DE++ i+++   s+++  S++
  KHJ31843.1 167 ILLYGPPGSGKTSLCRGLAQKASIrlntiYTQTRFIQIKTATLLSkyYSESARQVDEIFTKITQICTQNPDEfiCVLIDEVESIASSreFSIKSGESQD 265
                 7899*********99999999999888886666777777666666465667777777655444433332222458***********7765555555555 PP

                 HH..HHHHHHHHH--EE- CS
       AAA_2  94 gV..qrdLLqileggtlt 109
                      ++LL  l+ ++++
  KHJ31843.1 266 SLraTNALLTGLDRTKMN 283
                 432256677666666665 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.1e-05    0.0071       3      90 ..     169     252 ..     167     261 .. 0.73

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.1e-05
                     EE-STTSSHHHHHHHHHHHHT-EEEEHHHHHHHHHHHHHHTT--TT-HHHHHHHHHT--EEEEEE.EEEETTEE-TTGGGSHHHHHHHH CS
  Cytidylate_kin   3 iDGPagsGKssvaralaeklglkyldtgalYRalalaalrrkvdlldeaalvelakevelsfeae.kvllngedveeelrsdevekavS 90 
                     + GP gsGK s++r la+k ++++    ++Y ++ ++ ++  +++l  ++  e a++v+  f++  ++  ++ d    +  deve+++S
      KHJ31843.1 169 LYGPPGSGKTSLCRGLAQKASIRL---NTIYTQTRFIQIK--TATLLSKYYSESARQVDEIFTKItQICTQNPDEFICVLIDEVESIAS 252
                     67*****************99875...4589888888776..45555566666777766555543377777777777777888888777 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.4e-05    0.0085      18      46 ..     163     191 ..     147     216 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.4e-05
                 HTEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE  18 lgdvilLeGdLGaGKTtlvrglakalgve 46 
                 ++ +ilL+G+ G+GKT l+rgla++  ++
  KHJ31843.1 163 MNPLILLYGPPGSGKTSLCRGLAQKASIR 191
                 2456********************98875 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.2e-05    0.0075      34      93 ..     165     224 ..     134     246 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.2e-05
      RuvB_N  34 dhvllyGpPGlGkttlakiiakelgvklkitsgPvlekagdlaalltnleekdvlfidei 93 
                   +llyGpPG Gkt+l++ +a++  ++l++  + +   +   a+ll++  ++    +dei
  KHJ31843.1 165 PLILLYGPPGSGKTSLCRGLAQKASIRLNTIYTQTRFIQIKTATLLSKYYSESARQVDEI 224
                 569******************998888776555444445556777777777777777777 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.8e-05     0.011       2      78 ..     167     251 ..     166     306 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.8e-05
                 EEEE--SSSSHHHHHHHGGGGB..S--EEEEE--TT--HHHHH--B--............--------.......G-SEEEEESGGG-- CS
       AAA_5   2 vlLvGppGtgKselaerlaaal..nreveyvqltrdtteedlkgrreik...ngttslvdsplvraar.......egeilvlDEverae 78 
                 +lL GppG+gK++l + la+    + ++ y q    t+  ++k  + ++   ++ ++ vd ++++  +       e   +++DEve + 
  KHJ31843.1 167 ILLYGPPGSGKTSLCRGLAQKAsiRLNTIYTQ----TRFIQIKTATLLSkyySESARQVDEIFTKITQictqnpdEFICVLIDEVESIA 251
                 69*****************9874333333333....33333333333333336777777888877666777777333344467777555 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00024      0.15      55      92 ..     166     209 ..     138     307 .. 0.74
   2 ?   -0.0   0.0      0.65     4e+02     103     127 ..     445     469 ..     430     481 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00024
      DUF815  55 nvLLwGarGtGKSslvkallneyaeeg......Lrlievekedl 92 
                  +LL+G  G+GK sl++ l ++++ +        r+i+++  +l
  KHJ31843.1 166 LILLYGPPGSGKTSLCRGLAQKASIRLntiytqTRFIQIKTATL 209
                 58*****************9998766556677778888877665 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.65
      DUF815 103 rerperfilfvDDLsFeeeeeeyks 127
                  er+++f l +DD++  +  ++y++
  KHJ31843.1 445 MERKRKFRLILDDICDSQAADKYRK 469
                 47899999*******9999999974 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   0.00016       0.1       1      21 [.     170     190 ..     170     197 .. 0.90
   2 ?   -0.8   0.0       3.2     2e+03      90     131 ..     226     266 ..     208     271 .. 0.62

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00016
                 EE-TTSSHHHHHHHHHHHHTE CS
      AAA_17   1 lGgPGsGKgtqceklvekygf 21 
                 +G+PGsGK+ +c+ l++k  +
  KHJ31843.1 170 YGPPGSGKTSLCRGLAQKASI 190
                 7****************9876 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 3.2
                 ESSHHHHHHHH..SEEEEEE--H.HHHHHHHHHHTTST-TS-S CS
      AAA_17  90 dglpkevleelkpdaiilleadp.eeilerrlkdrtrgrdddn 131
                  ++++ +  + +pd +i++ +d+ e i + r    ++g + d+
  KHJ31843.1 226 TKITQ-I-CTQNPDEFICVLIDEvESIASSREFSIKSGESQDS 266
                 44433.2.24479999987766515666667666677776666 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   5.7e-05     0.035       2      51 ..     165     218 ..     163     255 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 5.7e-05
                 .EEEEE--TTSSHHHHHHHHHHHHHH......TT--EEEE-THHHH.TTSSS--GG CS
       KTI12   2 pLvvltGlPssGKstrakeLakalee......ekrsvvviddeslgiekdsykdsa 51 
                 pL++l G P sGK+++ + La++ +       ++ + + i++++l   ++ y +sa
  KHJ31843.1 165 PLILLYGPPGSGKTSLCRGLAQKASIrlntiyTQTRFIQIKTATLL--SKYYSESA 218
                 9*********************998766665555555555555555..44444443 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   9.6e-05      0.06       4      40 ..     167     208 ..     164     216 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 9.6e-05
   PduV-EutP   4 illiGkvgsGKttLtqalkg.....eelkYkktqaiefsdev 40 
                 ill G+ gsGKt+L++ l +      + +Y++t  i++++++
  KHJ31843.1 167 ILLYGPPGSGKTSLCRGLAQkasirLNTIYTQTRFIQIKTAT 208
                 899***************996666666789999988887765 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0     0.003       1.9      16      45 ..     161     188 ..     152     236 .. 0.79
   2 ?    3.3   0.1     0.064        39      96     120 ..     441     466 ..     414     479 .. 0.69

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.003
                 TTSCSEEEEEEESTTSSHHHHHHHHCCSHC CS
      NB-ARC  16 delqslvvalvGmgGvGKttlakqilnksd 45 
                 +e++  ++ l+G +G+GKt l +   +k +
  KHJ31843.1 161 GEMN-PLILLYGPPGSGKTSLCRGLAQK-A 188
                 5555.5789************9988777.3 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.064
                 HHHHCCCT.TEEEEEEEE-SHHHH.. CS
      NB-ARC  96 lvrlLltk.rfllvlDDVweeedwdk 120
                 +   +++k +f l+lDD+ +++  dk
  KHJ31843.1 441 VKINMERKrKFRLILDDICDSQAADK 466
                 444577776999*******9987554 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00024      0.15      50      74 ..     167     191 ..     154     240 .. 0.76
   2 ?   -2.9   0.0       7.6   4.7e+03     101     127 ..     443     468 ..     411     474 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00024
   IstB_IS21  50 ivllGpsGvGKshlaialgveavra 74 
                 i+l Gp+G GK+ l   l+++a  +
  KHJ31843.1 167 ILLYGPPGSGKTSLCRGLAQKASIR 191
                 7899****************98432 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 7.6
   IstB_IS21 101 ralkrllkvdllilDdlgllpldqaea 127
                  +++r  k++ lilDd+   +  ++ +
  KHJ31843.1 443 INMERKRKFR-LILDDICDSQAADKYR 468
                 4444444444.6788887666655555 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       8.8   5.5e+03      41      80 ..      44      95 ..      29     124 .. 0.59
   2 ?   12.7   0.0   0.00023      0.14      13      61 ..     166     214 ..     162     289 .. 0.65

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 8.8
                EEEET.TCEGGGB-HHHCCHCEEEE-SS.--S-TTSBHHHH...........H CS
                xxxxx.xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx...........x RF
    ABC_tran 41 eilld.gkdlkeqeleslrkeigvlpqe.pqlfpeltvren...........e 80
                +i+++  +d+ + +++  ++++g l q+ + l + l+v e            +
  KHJ31843.1 44 NITFElLEDILD-DTQNGEHKLGSLYQQaKDLLSSLKVVEYmgparefscytT 95
                455554445555.5555566666666655666666666655555555555442 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00023
                 EEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  13 kvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkei 61 
                 ++ + G+ G+GK++L++ la++ +    +i  + + ++ ++ + l+k  
  KHJ31843.1 166 LILLYGPPGSGKTSLCRGLAQKASIRLNTIYTQTRFIQIKTATLLSKYY 214
                 57899******************99999996666655554444333332 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   0.00014     0.084       2      22 ..     167     187 ..     166     223 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00014
      AAA_28   2 ivitGgestGKTtlleaLaar 22 
                 i + G++++GKT+l++ La++
  KHJ31843.1 167 ILLYGPPGSGKTSLCRGLAQK 187
                 889****************86 PP

>> AAA_13  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.2       1.2   7.3e+02     430     470 ..      17      57 ..      11      71 .. 0.81
   2 ?   11.5   0.0   0.00014     0.085      20      53 ..     168     201 ..     153     231 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.2
      AAA_13 430 kelkeeeaelkkleeeikeLekqlrdekpaaeeinkeLkaf 470
                 ++++++  +   +e+  +eLe ql++e+ + e ++++L + 
  KHJ31843.1  17 DKINDADIDCISYEKLQAELEHQLSSENITFELLEDILDDT 57 
                 5677777788888999999*******999999999999876 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00014
      AAA_13  20 liYGwNGaGKTtLSrllrslelgetepkfangsi 53 
                 l+YG  G+GKT+L+r l++  + + ++ +++  +
  KHJ31843.1 168 LLYGPPGSGKTSLCRGLAQKASIRLNTIYTQTRF 201
                 89*****************998888888888776 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00015     0.095      18      76 ..     165     230 ..     144     270 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00015
      AAA_11  18 eitliqGPPGtgKTktivellsqll.......srrkseeeksakpriLvCapSNaAvDellerllr 76 
                  + l+ GPPG+gKT+   +l +++        ++++  + k+a+    + ++S   vDe+  ++ +
  KHJ31843.1 165 PLILLYGPPGSGKTSLCRGLAQKASirlntiyTQTRFIQIKTATLLSKYYSESARQVDEIFTKITQ 230
                 47899****************999644433321122344444444445667777788888888877 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00028      0.17       2      42 ..     167     208 ..     166     337 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00028
                 EEEEESTTSSHHHHHHHHHTSTE.EESSSTTSSSSEEEEEEE CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgeka.ivsdkpgtTrdinegrvk 42 
                 ++++G p +GK++L + l ++++ + + +   Tr i+ ++ +
  KHJ31843.1 167 ILLYGPPGSGKTSLCRGLAQKASiRLNTIYTQTRFIQIKTAT 208
                 6899****************9652668888889999888776 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0054       3.3     101     132 ..     166     197 ..     153     206 .. 0.89
   2 ?    1.8   0.0      0.33     2e+02      19      63 ..     372     417 ..     363     450 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0054
                  EEEEECSTTSSHHHHHHHHCTT-----S---- CS
  RsgA_GTPase 101 tsvlvGqSGvGKStLinallpelelktgevse 132
                  +++l G+ G GK++L   l+++++++ + + +
   KHJ31843.1 166 LILLYGPPGSGKTSLCRGLAQKASIRLNTIYT 197
                  57899*****************9999998865 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.33
                  EEEEEEST.TTT--HHHHHHHHHHHHHTT-EEEEEEE-GGG--HHH CS
  RsgA_GTPase  19 llivvslk.epelslnlldrfLvlaeekgiepvivlnKiDlleeee 63 
                  + ++ s++ +p++++++  r ++++ e+ i   + + K+Dl    +
   KHJ31843.1 372 VHLIRSTNiDPKFKKEFSGRSITQLPEQAILRYLRFEKCDLNLALT 417
                  55555554379*****************************977666 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00078      0.48      34      54 ..     165     185 ..     157     193 .. 0.87
   2 ?   -2.9   0.0       6.7   4.2e+03     128     153 ..     223     249 ..     208     289 .. 0.58

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00078
      AAA_25  34 elallaGapgtGKttlaldla 54 
                  l+ll+G+pg+GKt l+  la
  KHJ31843.1 165 PLILLYGPPGSGKTSLCRGLA 185
                 589************998776 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 6.7
      AAA_25 128 advdaleaaieeveg.vrlvviDplsr 153
                 + + ++ + +++ ++    v iD + +
  KHJ31843.1 223 EIFTKITQICTQNPDeFICVLIDEVES 249
                 333344444444333444455555544 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2       1.8   1.1e+03     102     136 ..      17      51 ..       8      89 .. 0.60
   2 ?   10.6   0.1   0.00096      0.59      19      39 ..     164     184 ..     148     264 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 1.8
      AAA_23 102 kttkkaklelleideleqfisellgskkiilnlil 136
                 +++++a+ + ++ ++l+ +++++l+s++i ++l+ 
  KHJ31843.1  17 DKINDADIDCISYEKLQAELEHQLSSENITFELLE 51 
                 45555556666667777777777777777666653 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00096
      AAA_23  19 kgltlItGpNGaGKTTildAi 39 
                 ++l l++Gp G+GKT++ + +
  KHJ31843.1 164 NPLILLYGPPGSGKTSLCRGL 184
                 79**************97765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       733  (0.0408835); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                        93  (0.00518713); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              29  [number of targets reported over threshold]
# CPU time: 0.63u 0.30s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 3299.23
//
Query:       KHJ31844.1  [L=323]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2257.52
//
Query:       KHJ31845.1  [L=112]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 863.77
//
Query:       KHJ31846.1  [L=320]
Description: putative bar domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.2e-64  215.7   2.9    9.8e-64  215.3   2.9    1.2  1  BAR_2           Bin/amphiphysin/Rvs domain for vesicular traf
    1.1e-19   71.0   4.3    1.7e-18   67.1   4.3    2.0  1  BAR             BAR domain
     0.0092   15.7   2.5       0.12   12.0   0.0    2.6  2  BAR_3           BAR domain of APPL family
  ------ inclusion threshold ------
      0.076   12.6   2.6       0.19   11.3   0.3    2.6  3  Arfaptin        Arfaptin-like domain
       0.38   10.5   4.1        1.2    8.8   3.5    1.9  2  WES_acyltransf  Wax ester synthase-like Acyl-CoA acyltransfer


Domain annotation for each model (and alignments):
>> BAR_2  Bin/amphiphysin/Rvs domain for vesicular trafficking
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.3   2.9   2.7e-67   9.8e-64       3     284 ..      16     298 ..      14     303 .. 0.94

  Alignments for each domain:
  == domain 1  score: 215.3 bits;  conditional E-value: 2.7e-67
       BAR_2   3 lsikkkttrllqeklgqvkdiskLPkqYleLEkkvDslekvykrlllvtktyevegYDYPpnltesisdwwksigaklkelknvssleedeivllgkkk 101
                 ++++++t+++++e+lgqv+d  +LP++Y eLEkkvD+l++v +++l+vt+ + +e+YDYP n++es+ d+++++++k++ l+ ++s+ e++ +l + ++
  KHJ31846.1  16 TPFAARTQQYMKEQLGQVEDKTQLPPDYIELEKKVDALKQVHQKMLQVTSQFANEAYDYPANIKESFGDLSRTVSEKVQLLSYATSTAEAQAALTAPSS 114
                 79******************************************************************************************8855444 PP

       BAR_2 102 kekskeekesqatsallprtlaqalskaakdsslilqeleekdedlepLikvleqvssaykeiaeakleqDslivkefnkkLeellnqefkkvhelrkk 200
                 ++              +p+t+++a+++a+  ss+ l e  ++++ ++pL+ +le+++ a++ i ea+l qDs i++ f +  +++ln+ ++ +++ r++
  KHJ31846.1 115 SKP-------------QPKTFNHAIARASLASSQLLAEQ-QSSSREDPLATALEKYALANERIGEARLAQDSQIQSRFLAAWSTTLNTTLNFASRARRN 199
                 333.............6****************999998.556666***************************************************** PP

       BAR_2 201 VeesRlkfdtlrseveek...............ekpeteeedkklleklEDefvsateeAvvvmkeildssklisllklfqkaqleYfekcvkkleell 284
                 Ve+sRl +d ++ + +++               +++ t ee + ++e++EDefv  teeAv vmk++ld  + + +l  +++aqleY++k+ + l el 
  KHJ31846.1 200 VENSRLMLDAVKAKAKNTgwvlpgqtqkppgirDDEITSEEARLEIEQAEDEFVGQTEEAVGVMKNVLDTPEPLRNLFDLVTAQLEYHKKAYDILSELT 298
                 *****************9**************8777788899*************************************************99988765 PP

>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.1   4.3   4.9e-22   1.7e-18       6     236 ..      20     300 ..      16     303 .. 0.83

  Alignments for each domain:
  == domain 1  score: 67.1 bits;  conditional E-value: 4.9e-22
         BAR   6 nRasqlleekvgkaekTk.LDedFeelerrldvteklieklvkelkeylqanpgarakqivlekl.................................. 69 
                 +R++q+++e +g++e ++ L +d+ ele+++d ++++ +k+++ ++++     +++    ++e                                    
  KHJ31846.1  20 ARTQQYMKEQLGQVEDKTqLPPDYIELEKKVDALKQVHQKMLQVTSQFAN--EAYDYPANIKESFgdlsrtvsekvqllsyatstaeaqaaltapsssk 116
                 69***********986555***********************99999877..44444444344446668899999999999999999999999999997 PP

         BAR  70 .......keqplelLaesmieagkelgedss.fgkalekygeavkklaqteeelekrvetnfldplrellekefkeiqkerkklehkrlDyDaakarlk 160
                           +   La+s + a ++ +++ + ++ aleky+ a+++++++    + +++++fl    + l++ +     +r++ e+ rl +Da ka+ k
  KHJ31846.1 117 pqpktfnHAIARASLASSQLLAEQQSSSREDpLATALEKYALANERIGEARLAQDSQIQSRFLAAWSTTLNTTLNFASRARRNVENSRLMLDAVKAKAK 215
                 7776666666666677766666666666655678***************************************************************** PP

         BAR 161 kl......ktkkskkakde....ekaeeelrkAqqkfeesneelkaeLpnllalevefvnqlqafveaqldfhkqaaqlleqlqqq 236
                         +t+k     d+    e+a+ e+++A+++f  + ee+   ++n+l++  + +++l ++v aql++hk+a+++l++l + 
  KHJ31846.1 216 NTgwvlpgQTQKPPGIRDDeitsEEARLEIEQAEDEFVGQTEEAVGVMKNVLDTPEP-LRNLFDLVTAQLEYHKKAYDILSELTPV 300
                 97333333455555544449*******************************776544.588889******************9876 PP

>> BAR_3  BAR domain of APPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.6     0.022        77      49     160 ..      12      64 ..       1     124 [. 0.55
   2 !   12.0   0.0   3.4e-05      0.12     183     226 ..     270     313 ..     232     320 .] 0.75

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.022
       BAR_3  49 saaqkqfaqsLrelkkes..kgdeetd..esLkkfsellqelenehtilldqaqrsikkpLekFrkedlkevkekkkkFdkesekleaaleknaqlskk 143
                 sa +  fa + +++ ke+  + +++t+      ++ + ++ l + h+++l+                                                
  KHJ31846.1  12 SASFTPFAARTQQYMKEQlgQVEDKTQlpPDYIELEKKVDALKQVHQKMLQ------------------------------------------------ 62 
                 555555555555555555331122222232222222222222222222222................................................ PP

       BAR_3 144 kkeseleeadnelkatr 160
                                  
  KHJ31846.1  63 ---------------VT 64 
                 ...............22 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 3.4e-05
       BAR_3 183 feiletllsfmqaqltFfhqGyelfkdlepfmkeLsaqlqqlra 226
                  e l +l+ ++ aql + ++ y+++++l p+ + L+ + +   +
  KHJ31846.1 270 PEPLRNLFDLVTAQLEYHKKAYDILSELTPVIEALQVEQEASYR 313
                 577999*****************************987665444 PP

>> Arfaptin  Arfaptin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.3   5.4e-05      0.19      12      87 ..      22      94 ..      19     111 .. 0.71
   2 ?   -1.6   0.0      0.47   1.7e+03      83     149 ..     143     210 ..     125     228 .. 0.63
   3 ?   -2.4   0.0      0.79   2.8e+03     168     186 ..     274     292 ..     237     297 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.4e-05
                XXXXXXXXXXXX--....CHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHH..H-C CS
    Arfaptin 12 tkqvlseklgkkedervitvdd.eLeaklevlreiketykelvklaknlskallkl.sqtekelGdvfkdlskrekqe 87
                t+q ++e+lg+ ed+     d  eLe+k++ l++++++ ++++     +++  ++  ++ ++++Gd  +  s+  k +
  KHJ31846.1 22 TQQYMKEQLGQVEDKTQLPPDYiELEKKVDALKQVHQKMLQVTSQ---FANEAYDYpANIKESFGDLSRTVSE--KVQ 94
                899***********988888855*************987766655...5554444425666777777766666..444 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.47
                 ..H-CCGHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH CS
    Arfaptin  83 rekqealgeaftatgealrllakqgeallkalk.rfiselntfvnkaieDTllTikkyedarieYray 149
                   ++  l  a+++ + a   +++ ++a + +++ rf++  +t +n +++  +   +++e+ r+  +a 
  KHJ31846.1 143 SSREDPLATALEKYALANERIGEARLAQDSQIQsRFLAAWSTTLNTTLNFASRARRNVENSRLMLDAV 210
                 44555566666666666666666666666666435666666666666665555555555555555555 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 0.79
                 HHHHHHHHHHHHHHHHHHH CS
    Arfaptin 168 eekfreaqenvqeakekfd 186
                 +++f  ++++ + +k+ +d
  KHJ31846.1 274 RNLFDLVTAQLEYHKKAYD 292
                 3455555555555665555 PP

>> WES_acyltransf  Wax ester synthase-like Acyl-CoA acyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.2     0.015        52     184     241 ..      71     128 ..      38     139 .. 0.71
   2 ?    8.8   3.5   0.00035       1.2     154     257 ..     111     218 ..     100     221 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.015
  WES_acyltransf 184 lvglvaglgkvlgsvagvvssagrlleaalearslvlpfaaprtplntplsraRrfaa 241
                       +  a++++ +g ++ +vs+ ++ll+ a +++++ ++++ap++  ++p + + ++a 
      KHJ31846.1  71 AYDYPANIKESFGDLSRTVSEKVQLLSYATSTAEAQAALTAPSSSKPQPKTFNHAIAR 128
                     4566788888999999999999999999999999999999997777666665554444 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00035
  WES_acyltransf 154 dldpddpprpeppqvpprdr.srtqlrasgalvglvaglgkvlgsvagvvssagrlleaal...earslvlpfaaprtplntplsraRrfaaasl 244
                       + ++p+++++   ++r++ ++ ql a+++ ++  + l ++l+  a + ++ g+++ a     ++r l++  ++ +t ln +  ++R++++ +l
      KHJ31846.1 111 APSSSKPQPKTFNHAIARASlASSQLLAEQQSSSREDPLATALEKYALANERIGEARLAQDsqiQSRFLAAWSTTLNTTLNFASRARRNVENSRL 205
                     3444455555555556666666777777778899999999999999999999999998876554444455555555888888888999******* PP

  WES_acyltransf 245 pLadvkavakalg 257
                      L+ vka ak++g
      KHJ31846.1 206 MLDAVKAKAKNTG 218
                     ********99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1094  (0.0610185); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.29s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 2163.32
//
Query:       KHJ31847.1  [L=457]
Description: putative mfs general substrate transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-38  130.9  22.0    4.9e-38  130.9  22.0    2.0  2  MFS_1     Major Facilitator Superfamily
    6.8e-07   28.5  10.2    1.1e-06   27.7  10.2    1.4  1  Sugar_tr  Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.9  22.0   5.5e-42   4.9e-38       2     353 .]      17     416 ..      16     416 .. 0.76
   2 !   14.1   9.6   1.8e-06     0.016      69     178 ..     347     454 ..     345     457 .] 0.72

  Alignments for each domain:
  == domain 1  score: 130.9 bits;  conditional E-value: 5.5e-42
       MFS_1   2 llaaflsalarsilgpalplalaed..................lg....................ispse.igllltlyalgaavaslplGrlsdrfGr 61 
                 +++++l   ++++++p++p +++                    l                     +++    g l +l+++++a+as+++G lsdr+Gr
  KHJ31847.1  17 FISLLLDLVSFTFILPLFPTLISYYrdlevptelnlknepktlLAyilvylnaykvsfarpidskYDVVLlGGALGSLFSFLQAIASPVIGTLSDRYGR 115
                 77777788888888888884443334444444444444444440044444444444444443333333333566999********************** PP

       MFS_1  62 rrvlllglllfalglllll.fasslwlllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWrav.fyila 158
                 r  ll+++ + +l+ +ll+ +a+ ++++l++r++ Gl + + + ++ a+ +d++ +++rg+ ++l++++fs+++ lgp+lg++l++  + +a  f  +a
  KHJ31847.1 116 RTALLTSMCGNILS-VLLWlLAADFPTFLLSRIVGGLSE-GNVQIATAIGTDVSDENQRGSTMALVGICFSISFTLGPALGSWLSTINSVQANpFATVA 212
                 **************.44443568888************8.6667777**************************************999977655***** PP

       MFS_1 159 ivsllafv..lfllllpeepperkrkspkeee...............kgtgpaplvp..awkallkdpvlwillialllfffgfsglltllplylqevl 238
                 ++sl+++v   ++l+++ +++ ++r  + +++               k++ + +       +   ++ +++ l ++ l+f ++fsg+ + lp+++ + +
  KHJ31847.1 213 GFSLFLIVieTIYLYFYLPETLPSRILSNKLKstinseqdssnkissKSPSEIQ--VspEVSVSGTNSHFL-LNMTHLIFILFFSGMEFSLPFMTYDLF 308
                 ******999955566666666666666666656699988855555332222222..233555555555666.55555555569999************* PP

       MFS_1 239 glsglllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllllvlvliGfglgfvfpsllalasdlappeeagta 337
                 g+s   l+g ll+ +++++   +++ gr+ +r+++ r+  ++++++l+a+++la + +    + l+++  l+ ++ ++v++ l+al s  a+ + +g+ 
  KHJ31847.1 309 GYS-SALNGRLLGYMGFLA---SIIQGRVTRRIPPLRAVQIGIVSCLMALFLLARIRTV---SGLYIAATLLAITTATVVTGLNALSSFEAGINDRGAK 400
                 ***.7****9********9...99********999888888888888888888888888...666667778899************************* PP

       MFS_1 338 sglfntagslggalgp 353
                 +g+  + g+lg+a+gp
  KHJ31847.1 401 LGFHRSWGQLGRAMGP 416
                 **************98 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 1.8e-06
       MFS_1  69 lllfalglllllfa..sslwlllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllaf 165
                 +++ + + l+ll a   ++  l+++  l ++++++++++ +al +  +  ++rg  +g+  +  +lG ++gpll   ++ ++  r   y ++ +++l+ 
  KHJ31847.1 347 IVSCLMA-LFLL-AriRTVSGLYIAATLLAITTATVVTGLNALSSFEAGINDRGAKLGFHRSWGQLGRAMGPLLFTSIY-WWAGREFAYNVGSMGMLG- 441
                 3444444.3333.34344557*****************************************************99999.444444444444444444. PP

       MFS_1 166 vlfllllpeeppe 178
                 v +l+++  ++p+
  KHJ31847.1 442 VTMLVFFGLKKPK 454
                 4344666665554 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7  10.2   1.3e-10   1.1e-06      27     311 ..      67     334 ..      58     393 .. 0.65

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 1.3e-10
                 HHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHH CS
    Sugar_tr  27 kfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPm 125
                   a++  + +  +sk++  +l g++ s+f++ ++i s ++g+l+dr+GR+ +ll++    + + +l  +a     +  ++++R++ G++ G +++ +  
  KHJ31847.1  67 LNAYKVSFARPIDSKYDVVLLGGALGSLFSFLQAIASPVIGTLSDRYGRRTALLTSMCGNILSVLLWLLAA---DFPTFLLSRIVGGLSEGNVQIATA- 161
                 44555555666666677778899999********************************************9...9****************9887665. PP

                 HHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-..TTHHHHHHHCCHHHHHHHHHHG.GGS---HHHHHHTT-HHHHHHHHHHHHHCHHHH CS
    Sugar_tr 126 yisEiApkklRgalvslyqlaitfGilvaaifglglnktsn..adgwrillglqlvpallllill.lflPESPrylvekgkeeeakevlaklrgeedad 221
                     ++ ++ Rg  + l   + ++ + ++  +g  l+++++  a+ +    g++l++ ++  i l + lPE+              ++l++     + +
  KHJ31847.1 162 IGTDVSDENQRGSTMALVGICFSISFTLGPALGSWLSTINSvqANPFATVAGFSLFLIVIETIYLyFYLPETLPS-----------RILSN-----KLK 244
                 5668********998888888888888888888777777777778899999999888888666552679999322...........23333.....222 PP

                 HHHHHHHHHHHHHHH.......HTTHHHHSH....HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THHHHHHHHHHHHHHHHHHHHHHHH CS
    Sugar_tr 222 relaeekdsleaeqeee..kaswkellsskt.vrqrlligvvlqifqqltGinaimyysptifenlglsksllvtiivgvvnfvatfvaiflv 311
                   ++ e+ds ++ ++++  ++++++ +s  + +   ll++  l ++ +++G+ + + +  + ++  g+s   l   ++g + f+a+++   + 
  KHJ31847.1 245 STINSEQDSSNKISSKSpsEIQVSPEVSVSGtNSHFLLNMTHLIFILFFSGMEFSLPF--MTYDLFGYSSA-LNGRLLGYMGFLASIIQGRVT 334
                 2233333333322222222222222222222234445555555556666664433322..22344455544.445555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       611  (0.0340789); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 3357.63
//
Query:       KHJ31848.1  [L=659]
Description: putative multidrug resistance protein fnx1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-05   22.6   0.2       0.12   12.1   0.0    2.8  3  DDE_1     DDE superfamily endonuclease


Domain annotation for each model (and alignments):
>> DDE_1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.18   3.2e+03      38      69 ..     108     140 ..      87     149 .. 0.69
   2 !    7.7   0.0   0.00015       2.6       7      76 ..     229     296 ..     225     301 .. 0.79
   3 !   12.1   0.0   6.5e-06      0.12      99     133 ..     301     335 ..     295     370 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.18
       DDE_1  38 tkkkldveyksnrkawltssifeeWL.kvfdkr 69 
                 +  + +++y  ++++   +   + W+ k++++r
  KHJ31848.1 108 QLTYKTISYLLSQESPPRDPPSTSWFsKWWKNR 140
                 555555666666666666666688999999987 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00015
       DDE_1   7 llcanaagsekLkplvigkaksprafkngektkkkldvey.ksnrkawltssifeeWLkvfdkrleaekrk 76 
                 ++  +++g++  +p +i+ ++++   +    +++  +  + + + ++ ++s+ + e+Lk+f+k   +  +k
  KHJ31848.1 229 VIKTISTGGNYQPPFIILPGEKLMDNWC---HENVENDTWaTTSPTGYISSQAMLEYLKYFVKFSDSGPNK 296
                 4567999********************9...4555555551456699**************9987755555 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 6.5e-06
       DDE_1  99 niklvflPassasllqPldqgvvselKarYrrqll 133
                 +i l ++P++ ++ lqPld+g++ + K++  r+++
  KHJ31848.1 301 HIYLQIFPSHGTHALQPLDVGIFRKWKHQQNRYIN 335
                 6778899****************999987665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (659 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4879.01
//
Query:       KHJ31849.1  [L=468]
Description: putative peroxisomal membrane protein pex31 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-78  263.2  12.2    3.9e-78  263.0  12.2    1.0  1  Pex24p    Integral peroxisomal membrane peroxin


Domain annotation for each model (and alignments):
>> Pex24p  Integral peroxisomal membrane peroxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  263.0  12.2   2.1e-82   3.9e-78       3     366 .]      61     454 ..      59     454 .. 0.87

  Alignments for each domain:
  == domain 1  score: 263.0 bits;  conditional E-value: 2.1e-82
      Pex24p   3 lsspllssnppqlssrLakifplllildkvlkiltWtnpdktlsfllvytficlvpylelvvlplllllfvvmvpaylyrh.plrksslik........ 92 
                 ++s+ll+s+ppq+++ L+++  +ll+l+k++++ltWt+ d++ sf+lv++f+++v+y ++++ ++++l+  +++   +y++  + ++ + +        
  KHJ31849.1  61 QKSSLLLSTPPQITRVLVYSNLFLLPLNKLVGLLTWTSGDPWESFILVISFWAIVLYSDVAIRYAAPLITSIVLSLCVYIRkCTTNPFTFStrqekvmk 159
                 79******************************************************************************9777777666688999988 PP

      Pex24p  93 ...keesknestsegptldeaskeivlnLrdlqnkmedllnpidalekflkelag..fkdenlstllfl.tllltpililll...srlipwrlillvlg 182
                    + + + +s ++++tl+    eiv++Lr+++n++    +p+  l +fl+ +    ++ ++l   + + ++ll++i+i l    ++li++++ +l++g
  KHJ31849.1 160 hnnNIKLEASSVNHQKTLE----EIVETLRTFTNRCHVAFDPFLDLIDFLEAQWSksMSPKHLLNSILTrFILLSIIWIALNlepIQLITPKRSILFIG 254
                 8764444456778888888....*************99988888888888887766677666655555505555555555559**************** PP

      Pex24p 183 ailltyHpsvkkvllrllwrlkivrlvvkyltgkelkka..........kskekkeelikelekketadiildespetr.kpkrftveifEnqrrwllg 270
                 ++llt+H+++ ++ + +lwr+++vr+++  +tg++l+ +          k++  + e+ +++++ + +d +l++++ t   ++rft++i+Enqrrw +g
  KHJ31849.1 255 TLLLTWHSQPNRMARIILWRSTLVRRFCGSVTGLQLTVStdstdlvgnkKPTSASLENLSQFQESIYSDQSLKSQKFTHsFGVRFTFIIYENQRRW-VG 352
                 *************************************9899**999977555555555566666666666655555554699**************.** PP

      Pex24p 271 kgWtsslfsserydwtdetrkalkespsgvdhledvkpPe......dWkWdekkkWrlDlepdewvk........eeeekkGWvYddnkwkepst.eds 354
                  gWt++lf++er++wtde   +l ++p+    ++++++P+       WkW++++ W ++    +++         +++ek GW+Y+dnkw+++++ +d+
  KHJ31849.1 353 LGWTTNLFAYERAAWTDE---YLSPVPP----KDKFQLPDvedssmAWKWVDGSIWMIEGV--GAIDegsnrasvDIDEKMGWIYYDNKWQHGRRgMDG 442
                 ******************...9******....**************************995..777777778887888888****************** PP

      Pex24p 355 lsketRRRrwiR 366
                 +  +tRRR+w+R
  KHJ31849.1 443 WGCYTRRRKWYR 454
                 ***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3296.16
//
Query:       KHJ31850.1  [L=217]
Description: hypothetical protein EV44_g2355 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       490  (0.02733); expected 358.6 (0.02)
Passed bias filter:                      192  (0.0107089); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1693.21
//
Query:       KHJ31851.1  [L=870]
Description: putative topoisomerase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.1e-12   46.1   0.1    1.1e-11   44.7   0.1    1.8  1  PAP_assoc     Cid1 family poly A polymerase
    2.9e-07   30.7   0.0    8.6e-07   29.2   0.0    1.8  1  NTP_transf_2  Nucleotidyltransferase domain
  ------ inclusion threshold ------
      0.013   14.2   0.0      0.019   13.7   0.0    1.2  1  O-ag_pol_Wzy  O-antigen polysaccharide polymerase Wzy


Domain annotation for each model (and alignments):
>> PAP_assoc  Cid1 family poly A polymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   0.1   1.9e-15   1.1e-11       1      62 []     741     798 ..     741     798 .. 0.96

  Alignments for each domain:
  == domain 1  score: 44.7 bits;  conditional E-value: 1.9e-15
                 -HHHHHHHHHHHHHHT--TTTEEEECSST-EEEHHHHCGCS-SSEECESSSSEBEETTCCCC CS
   PAP_assoc   1 sLGeLLigFFeyYgreFdyenvvisirtggiltkkekgwesaeskernrfllaIeDPfeldn 62 
                 +LGe L++FF++Yg++F+  +++is+++  +l k e++++     +++   ++I DP++++n
  KHJ31851.1 741 NLGEVLLEFFDLYGNRFNTVKNAISLNPACYLRKCELNHV----YQKRIDKFCIIDPNNPEN 798
                 8***************************************....56889**********987 PP

>> NTP_transf_2  Nucleotidyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   1.4e-10   8.6e-07       4      80 ..     568     671 ..     562     688 .. 0.87

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 1.4e-10
                   HHHHHHHHTTTSEEEEEHHHHCTTSCTTSSEEEEEEESTTCHHH............................HHHEHHHHHHHHCCCEEECTTEEEE CS
  NTP_transf_2   4 lleelkelepvakvvlfGSyarGtalkgSDiDllvvlpeevsre............................kkeegleklaeiikfleellglevd 72 
                   l+ +++  +++a++  fGS+  G++l++ D+Dl+ ++++   r                              ke +++++++  k +++l+gl+vd
    KHJ31851.1 568 LKYRVRNYSKDAEILSFGSFPAGLYLPTADLDLVMISNHYM-RGgrpqfgynsgqvhkfgrfleeeqiilkgSKECITKAKVPLVKYVDRLTGLKVD 663
                   4555666667*****************************95.44799*************************99999******************** PP

                   EECEEECC CS
  NTP_transf_2  73 lvtrekle 80 
                   +++++  +
    KHJ31851.1 664 ISFENTTG 671
                   **876655 PP

>> O-ag_pol_Wzy  O-antigen polysaccharide polymerase Wzy
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   3.1e-06     0.019     261     343 ..     717     793 ..     691     817 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 3.1e-06
  O-ag_pol_Wzy 261 ilpilllfmqlvnyiRngnevssssffellisffyeqgvsfnvlaytilyadeipsveinytlgkiieyiksniLgaifglkp 343
                   i++ ++ ++q + ++Rn++ v   ++ e+l++ff   g  fn+++++i +++  + ++        ++ +++ +++++  ++p
    KHJ31851.1 717 ITCLVVSLLQHMPQVRNKSMVPEHNLGEVLLEFFDLYGNRFNTVKNAISLNPACYLRK------CELNHVYQKRIDKFCIIDP 793
                   7899999*********************************************766554......3444455555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (870 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       604  (0.0336884); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.40
# Mc/sec: 6452.33
//
Query:       KHJ31852.1  [L=323]
Description: putative nicotianamine synthase 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.6e-48  163.9   0.0    5.4e-48  163.7   0.0    1.0  1  NAS              Nicotianamine synthase protein
    1.4e-07   31.4   0.0    2.6e-07   30.5   0.0    1.4  1  Methyltransf_31  Methyltransferase domain
  ------ inclusion threshold ------
      0.019   14.5   0.0      0.035   13.7   0.0    1.4  1  Glyco_hydro_4    Family 4 glycosyl hydrolase
      0.069   13.8   0.0       0.14   12.8   0.0    1.6  1  Methyltransf_11  Methyltransferase domain


Domain annotation for each model (and alignments):
>> NAS  Nicotianamine synthase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.7   0.0   1.2e-51   5.4e-48       5     272 ..      29     310 ..      23     314 .. 0.87

  Alignments for each domain:
  == domain 1  score: 163.7 bits;  conditional E-value: 1.2e-51
         NAS   5 sealvkkildlyeaiskLeslspseevnaLFtdLvtacitrspvdvtk..lg.qevqeileeLirlcseaeglLeshyskl....laafe.nPldhlei 95 
                 +++l+kkil ++ ++ +L + ++ +e+  LF+++   c+ +  +  +   l+ +++ ei ++L+ +cs+ e++Le+++s      +++++ +    ++ 
  KHJ31852.1  29 VNILIKKILFIHGQMVSLRESESFNEIADLFSEIRLICTRPISDRASDliLKnPRIIEITSDLRSFCSAIETNLEKKWSLKaagdVGSTQeEVCARIRA 127
                 899******************************97667655444444455556***********************99843122245555377899*** PP

         NAS  96 FPyyknYlkLsklEyellskkvtevPt.kvaFiGsGPlPltslvla...skhlsktifdnlDkdglandkasklvsadedlssrmsfhtadvldvteel 190
                 +Py++ Y++L++ E+ ++ +  ++ P  k+aFiGsG +P+tsl+l+   ++  +++++ n+D+d++a + ++ +++++   ++ m f  a++  ++ +l
  KHJ31852.1 128 YPYFNTYVNLIEAELSAMRSIEQK-PIkKIAFIGSGAMPMTSLCLIgrlTDTPTNISVLNIDRDAEALELSKVVCERLGSQAEGMEFCHAEAG-TSLDL 224
                 *****************9877766.655*****************9555566669999********************************987.5789* PP

         NAS 191 kaydvvflAAlvGmakeeKakviehlakkmakGavlvlrsahGarafLypvvdpe.dlk...gfevlavihPe.devinsvivarkk 272
                 ++ d v+lAAlvG ++e+K+ ++ +++ km +Ga+lv+r+ + +r+++y+v+dp+ + +    ++v  vi+P+  +++ns+ v+r k
  KHJ31852.1 225 NDCDAVYLAALVGHTQEQKEALLGQVTSKMRPGALLVTRGGRKLRSLIYTVFDPTtE-RvsnLLDVALVINPNkHNIVNSIFVGRVK 310
                 ******************************************************953.435899********85789******9965 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   5.8e-11   2.6e-07      27     123 ..     180     276 ..     169     310 .. 0.84

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 5.8e-11
  Methyltransf_31  27 pkaevvGiDiseeaielArenaqklgld..nveFeqgdiee.leklledekfDlilsnevl.naladpdkileeiervlkpggilliedprlla 116
                      +++ v +iD+++ea+el++  +++lg++   +eF+++++ + l+  l+d   D +   +++ +++  +++ l+++++ ++pg  l+++  r l+
       KHJ31852.1 180 TNISVLNIDRDAEALELSKVVCERLGSQaeGMEFCHAEAGTsLD--LND--CDAVYLAALVgHTQEQKEALLGQVTSKMRPGALLVTRGGRKLR 269
                      5888***********************999***********999..666..****9998889************************99999777 PP

  Methyltransf_31 117 elpakve 123
                       l++ v 
       KHJ31852.1 270 SLIYTVF 276
                      7774443 PP

>> Glyco_hydro_4  Family 4 glycosyl hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   7.7e-06     0.035       1      87 [.     155     242 ..     155     254 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 7.7e-06
                    EEEEETTTSS.SHHHHHHHHHHTTTTCTEEEEEEE-SSHHHHHHHHHHHHHHHHHCTTTCEEEEESSHHHHHTT-SEEEE---TT..HHH CS
  Glyco_hydro_4   1 kiviiGgGSt.ifaklllgdlkkteelsvselaLvDideerldaiqtlakklveeagadlkieattdrkealkdadfVitairvG..lek 87 
                    ki++iG+G   +++  l+g l+ t+  ++  +  +D d e l+ ++ ++++l  +a +    +a       l+d d V  a+ vG  +e+
     KHJ31852.1 155 KIAFIGSGAMpMTSLCLIGRLTDTPT-NI-SVLNIDRDAEALELSKVVCERLGSQAEGMEFCHAEAGTSLDLNDCDAVYLAALVGhtQEQ 242
                    8*******963677788888887764.44.466689999**************9999988899999999****************54333 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.2e-05      0.14      19      95 ..     182     261 ..     159     262 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.2e-05
                      SEEEEEES-HHHHHHHHHHCCHHT-...EEEETTEECCC.TSS-TT-EEEEEEES-CCC-.CCHHHHHHHHHHHEEEEEEEE CS
  Methyltransf_11  19 arvvgvDlskemlklakekaseegl...kvefvvadaek.lpfednsfDlvvssevlhhv.edpekalkeiaRvLkpgGllv 95 
                       +v+++D ++e+l+l+k   ++ g     +ef +a+a + l ++d  +D+v++   + h  e+ e++l ++   ++pg llv
       KHJ31852.1 182 ISVLNIDRDAEALELSKVVCERLGSqaeGMEFCHAEAGTsLDLND--CDAVYLAALVGHTqEQKEALLGQVTSKMRPGALLV 261
                      679999999999977744444443344468899998886256666..********999997788888999999999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2363.20
//
Query:       KHJ31853.1  [L=193]
Description: putative deacetylase-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        3.1    7.7   8.7       0.33   10.8   3.7    2.0  2  PNRC      Proline-rich nuclear receptor coactivator motif


Domain annotation for each model (and alignments):
>> PNRC  Proline-rich nuclear receptor coactivator motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.2       0.2   3.7e+03      14      18 ..      10      14 ..      10      14 .. 0.90
   2 ?   10.8   3.7   1.9e-05      0.33      10      20 .]     105     115 ..     105     115 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.2
        PNRC 14 sLPlP 18
                s+P+P
  KHJ31853.1 10 SVPKP 14
                89**9 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 1.9e-05
        PNRC  10 PePSsLPlPsF 20 
                 P+PSs+P+P+F
  KHJ31853.1 105 PSPSSIPIPTF 115
                 9*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1427.30
//
Query:       KHJ31854.1  [L=344]
Description: hypothetical protein EV44_g1966 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2650.56
//
Query:       KHJ31855.1  [L=393]
Description: hypothetical protein EV44_g4530 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-11   42.1   6.1    1.1e-10   41.4   6.1    1.4  1  DUF3716   Protein of unknown function (DUF3716)


Domain annotation for each model (and alignments):
>> DUF3716  Protein of unknown function (DUF3716)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   6.1     6e-15   1.1e-10       3      59 .]     137     188 ..     135     188 .. 0.95

  Alignments for each domain:
  == domain 1  score: 41.4 bits;  conditional E-value: 6e-15
     DUF3716   3 liqltGeeapepCtrCrrgkgpFeeCvvveasekakllkgaCanClygkqgskCslr 59 
                 l+ ++G+ +  pC+ C++g+g F+ C+++     ++ ++gaCa+C+ +++ ++Cs++
  KHJ31855.1 137 LLATRGDVQAIPCNTCANGRGKFSVCISL-----PNFFRGACASCQLSGRPNRCSIK 188
                 66799************************.....*********************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       849  (0.0473534); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3092.47
//
Query:       KHJ31856.1  [L=217]
Description: hypothetical protein EV44_g6368 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1711.83
//
Query:       KHJ31857.1  [L=290]
Description: putative nucleolus protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.8e-85  284.9   0.2    6.9e-85  284.4   0.2    1.2  1  Bmt2             25S rRNA (adenine(2142)-N(1))-methyltransfer
     0.0064   16.3   0.0      0.012   15.5   0.0    1.5  1  Methyltransf_23  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Bmt2  25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  284.4   0.2   7.7e-89   6.9e-85       5     220 .]      61     287 ..      57     287 .. 0.96

  Alignments for each domain:
  == domain 1  score: 284.4 bits;  conditional E-value: 7.7e-89
        Bmt2   5 aeiealGGleaYQlaSklgqskerggdsskvlvewlkekleelkleekk...lrlLevGalstknaiskvklldvtrIDLnsqekgilkqdFlerplpk 100
                 ++ie++GG+e YQ+aS lgqs+erggdssk+l+ewlk++++el+++ ++   lrlLe+Gals  na+++++l++v+rIDLnsq+k+i+kqdF+++p+ +
  KHJ31857.1  61 EQIESQGGIEGYQMASLLGQSRERGGDSSKLLLEWLKPVTTELRESIANgnpLRLLEIGALSHTNACTTCNLFEVERIDLNSQSKTIKKQDFMQMPISH 159
                 79**************************************999988666778*********************************************** PP

        Bmt2 101 keeekFdiislSLVlNfvpdaakRGemlkrvtkfLkpkkk.......aslsslflvLPlpCvtnSrylteerlrailsslGfelvkeketkklvyylle 192
                 +e++kFdiislSLVlNf+pda+++G+ml r++kfLk++k          ++ lflvLP+pCv nSry++++rl++i++slG+ ++k k +kkl+yyl++
  KHJ31857.1 160 DEKNKFDIISLSLVLNFIPDATEKGNMLLRTVKFLKTSKYsgtdeyvRLFPCLFLVLPAPCVMNSRYMNNTRLKEIMKSLGYICIKYKLSKKLIYYLWR 258
                 ***************************************99***99999************************************************** PP

        Bmt2 193 lkek.eeakekvfkkeelndgkkrnnFai 220
                  +e  +++  ++f+k+e++ gk+rnnF+i
  KHJ31857.1 259 FEEIeSTTVIQKFRKQEIRGGKSRNNFCI 287
                 988735667899****************8 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.3e-06     0.012      17     100 ..     108     182 ..      80     246 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.3e-06
  Methyltransf_23  17 lpklraggrvLdiGcGtGil.levlrengfsvtgvDlspeaveiaekakkaqkdqfdeqeaaepqgkfdlIvlrevlehvpdppe 100
                      +  +  + r+L+iG+ ++++ +  +  n f+v+ +Dl+++   i    kk+ + q+      ++++kfd+I+l+ vl+ +pd +e
       KHJ31857.1 108 A--NGNPLRLLEIGALSHTNaCTTC--NLFEVERIDLNSQSKTI----KKQDFMQM--PISHDEKNKFDIISLSLVLNFIPDATE 182
                      3..55666999***99995414433..577*******9874443....44444444..23345778***************9773 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2163.46
//
Query:       KHJ31858.1  [L=516]
Description: putative family transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-57  194.2  30.0    2.8e-29  101.9  12.4    2.3  2  MatE             MatE
     0.0039   17.2  20.8     0.0039   17.2  20.8    4.4  4  Polysacc_synt_C  Polysaccharide biosynthesis C-terminal domai
  ------ inclusion threshold ------
       0.11   12.0   0.1       0.11   12.0   0.1    3.5  3  E1-E2_ATPase     E1-E2 ATPase
        8.6    6.9   8.4       0.85   10.1   0.1    3.3  4  Sigma_M_inh      Sigma-M inhibitor


Domain annotation for each model (and alignments):
>> MatE  MatE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.9  12.4   6.2e-33   2.8e-29       1     161 []      71     232 ..      71     232 .. 0.98
   2 !   98.2   9.6   8.4e-32   3.8e-28       8     158 ..     299     450 ..     294     453 .. 0.96

  Alignments for each domain:
  == domain 1  score: 101.9 bits;  conditional E-value: 6.2e-33
        MatE   1 PialenllesllslidtllvgrlgskalAavsialsilsllfv.fllglstalttlvgqal.Gaknfkrakealrqglilllllsliiallvllfseqi 97 
                 P++l+++l+++l++i++l+vgrl+++alA +s++ ++++ + + ++lg stal+tl++  + G+kn + +++ l++++i+l+++++++a+l ++fs +i
  KHJ31858.1  71 PVVLAYALQNSLQTISVLIVGRLSPEALATASFSYMFAMSTAWlIALGGSTALDTLASSTFtGSKNSHHLGVLLQRAIIVLTVFYIPVAVL-WFFSAPI 168
                 99******************************************************986544*****************************.******* PP

        MatE  98 lslftqdeevlelakrylrililgipalalqlvlsgilrgagktkvplyislislllniplnyl 161
                 +++++q+e ++  ++++l++li+g ++++++++ +++l++++++++++y++++++++ + lny+
  KHJ31858.1 169 FQILGQEEYISVNSSKFLSALIPGGLGYIYFETMKKYLQAQEIMHAGTYVLILTSPISACLNYI 232
                 ***************************************************************7 PP

  == domain 2  score: 98.2 bits;  conditional E-value: 8.4e-32
        MatE   8 lesllslidtllvgrlgskalAavsialsilsllfvfllglstalttlvgqalGaknfkrakealrqglilllllsliiallvllfseqilslftqdee 106
                 +e++ + i+ l +grlg+ +lAa s+ +++ +++ ++++g+++a++++vg+ lGa+n  +a++a++ + +l++l+++i+  +++l  ++ +++f++d +
  KHJ31858.1 299 TEWWAFEIVALAAGRLGTISLAAQSVIMTTDQVMNTIPFGIGVAASSRVGNLLGARNAVGAARAANAAAWLSILMGAIVLCILMLVKNFYAKIFNDDVA 397
                 79************************************************************************************************* PP

        MatE 107 vlelakrylrililgipalalqlvlsgilrgagktkvplyislisl.llnipl 158
                 v++l+++ +++++l+++a++l+  + g lrg+g+++++++++++s+    +pl
  KHJ31858.1 398 VIKLTAEVIPWVALFQIADGLNGSCGGSLRGMGRQHIGAIVNIVSYyMGALPL 450
                 *********************************************96666666 PP

>> Polysacc_synt_C  Polysaccharide biosynthesis C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   3.5      0.55   2.5e+03      58     112 ..     109     165 ..      97     180 .. 0.58
   2 !   17.2  20.8   8.8e-07    0.0039       2     126 ..     186     311 ..     185     386 .. 0.82
   3 ?    0.2   2.1      0.16   7.3e+02      92     109 ..     368     385 ..     337     403 .. 0.58
   4 !    6.0   4.3    0.0025        11       2      76 ..     406     482 ..     405     486 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.55
  Polysacc_synt_C  58 aaiatvlallvvavlnlyalrrllgikl.ellrrll.kpllaalvmgivvyllllll 112
                      ++ a+++al  +++l   a +  +g k  + l  ll + +++  v +i v  l+ + 
       KHJ31858.1 109 MSTAWLIALGGSTALDTLASSTFTGSKNsHHLGVLLqRAIIVLTVFYIPVAVLWFFS 165
                      566777777777777777777777777763333333355555555555544333333 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 8.8e-07
  Polysacc_synt_C   2 LailalsiiflslstvlssiLqglgrqkialkalvigalvklilnllli..plfgivGaaiatvlallvvavlnlyalrrllgikl..ellrrl 91 
                      L+ l+++ + + ++ ++  +Lq+    ++ +++l+++  +  +ln++++    fg++Ga iat +a+ ++++l++ + r  ++ +    + r++
       KHJ31858.1 186 LSALIPGGLGYIYFETMKKYLQAQEIMHAGTYVLILTSPISACLNYIFVhtLGFGLLGAPIATGIAYWLSFALLVLYTRFFTHSNCwgGWSRSC 279
                      7889999999999************************************666779******************************965444444 PP

  Polysacc_synt_C  92 lkpllaalvmgivvylllllllgllllaal..allla 126
                          l+ ++ +  + +l  + +g+ ++a +  + l+a
       KHJ31858.1 280 ----LINIATFSRLAILGVVHIGTEWWA-FeiVALAA 311
                      ....444333333333444445555544.32133333 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.16
  Polysacc_synt_C  92 lkpllaalvmgivvylll 109
                      +  +l+++++ ++++l+ 
       KHJ31858.1 368 WLSILMGAIVLCILMLVK 385
                      333333333333333333 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.0025
  Polysacc_synt_C   2 LailalsiiflslstvlssiLqglgrqkialkalvigal.vklilnllli.plfgivGaaiatvlallvvavlnlya 76 
                      + ++al  i  +l+  +++ L g+grq+i +++++++     l l ++l  + +g+ G  i+ ++al +v ++ +++
       KHJ31858.1 406 IPWVALFQIADGLNGSCGGSLRGMGRQHIGAIVNIVSYYmGALPLGIWLAfHGWGLSGLWIGQCIALYLVGICEWII 482
                      56889999999******************999988887636788999999899*************99988877665 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.3      0.09     4e+02     116     176 ..      53     110 ..      41     113 .. 0.59
   2 ?   12.0   0.1   2.5e-05      0.11      86     164 ..     115     195 ..     110     199 .. 0.90
   3 ?   -0.7   1.0      0.19   8.5e+02     145     165 ..     427     454 ..     357     458 .. 0.54

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.09
                   HHHHHHHHHHHHHHHHHHHHS-STTTSSTTHHHHHHHHHHHH..HS-TTHHHHHHHHHHHHHH CS
  E1-E2_ATPase 116 dklgkvlvpvvlliallvflialllgkslaeallralallva..aiPcaLplavplalalgar 176
                   d++   l+ v+ll+   + +++ +      +  l+++++l++    P+aL++a + +++++++
    KHJ31858.1  53 DEFLYLLFEVSLLLRGSIPVVLAYAL----QNSLQTISVLIVgrLSPEALATA-SFSYMFAMS 110
                   55555555555555555555544433....33466666666633589999776.788887776 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 2.5e-05
                   EE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTT..HHHHHHHHHHHHHS-TTHH CS
  E1-E2_ATPase  86 tatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvflialllgksla..eallralallvaaiPcaLp 164
                   +a+g +t l+++a+++ + +++  +l   l++ + vl+++ + +a+l f+ a++ +   +  ++ +++  +l a iP +L+
    KHJ31858.1 115 IALGGSTALDTLASSTFTGSKNSHHLGVLLQRAIIVLTVFYIPVAVLWFFSAPIFQILGQeeYISVNSSKFLSALIPGGLG 195
                   68999*********************************************99998777777577788**********9997 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.19
                   T.......HHHHHHHHHHHHHS-TTHHH CS
  E1-E2_ATPase 145 a.......eallralallvaaiPcaLpl 165
                   +        a++++++  ++a+P ++ l
    KHJ31858.1 427 RgmgrqhiGAIVNIVSYYMGALPLGIWL 454
                   1222233366666666666666666655 PP

>> Sigma_M_inh  Sigma-M inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0         1   4.6e+03      67      83 ..     137     154 ..     100     162 .. 0.71
   2 ?   -0.8   0.1      0.48   2.2e+03       9      56 ..     288     317 ..     262     344 .. 0.52
   3 ?   -1.1   0.2      0.58   2.6e+03      11      30 ..     364     385 ..     356     416 .. 0.65
   4 ?   10.1   0.1   0.00019      0.85      42      89 ..     439     486 ..     432     494 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1
  Sigma_M_inh  67 lgllgvvlnlfvlv.cvy 83 
                     lgv+l+  ++v  v+
   KHJ31858.1 137 SHHLGVLLQRAIIVlTVF 154
                  456777776554441333 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.48
  Sigma_M_inh   9 ehnvfgwvsvgtavlsllllnlailsdviaysykmlpfamaavplgvv 56 
                     ++g v +gt   ++ ++ la                  a  lg +
   KHJ31858.1 288 RLAILGVVHIGTEWWAFEIVALA------------------AGRLGTI 317
                  34445555555544443333333..................2222222 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.58
  Sigma_M_inh  11 nvfgwvsv..gtavlsllllnl 30 
                  n   w+s+  g+ vl +l+l  
   KHJ31858.1 364 NAAAWLSIlmGAIVLCILMLVK 385
                  6667776533666666666544 PP

  == domain 4  score: 10.1 bits;  conditional E-value: 0.00019
  Sigma_M_inh  42 kmlpfamaavplgvvelfikkgrtglgllgvvlnlfvlvcvytivsvd 89 
                  +++ + m a+plg+   f   g +gl +   +   +v +c + ivs+ 
   KHJ31858.1 439 NIVSYYMGALPLGIWLAFHGWGLSGLWIGQCIALYLVGICEWIIVSLS 486
                  567899*******************9776666666677*******984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (516 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       786  (0.0438396); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3594.52
//
Query:       KHJ31859.1  [L=675]
Description: putative nuclear export protein noc3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-27   95.8   0.1    2.8e-27   95.8   0.1    2.2  3  CBF       CBF/Mak21 family
    1.1e-24   86.7   0.2    4.9e-24   84.6   0.2    2.2  1  NOC3p     Nucleolar complex-associated protein


Domain annotation for each model (and alignments):
>> CBF  CBF/Mak21 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.39   3.5e+03      59      92 ..     134     165 ..      97     205 .. 0.61
   2 ?   -2.3   0.1      0.43   3.9e+03     131     139 ..     356     364 ..     297     416 .. 0.58
   3 !   95.8   0.1   3.1e-31   2.8e-27       2     168 ..     475     662 ..     474     664 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.39
         CBF  59 adk.pvkrvaAFvKRllqlalhappsfalgllall 92 
                 +d+ p   v AF KRl+ql  +  +++ +  lal+
  KHJ31859.1 134 RDNdPEDNVDAF-KRLAQLGQT--THYEVKRLALM 165
                 333256666666.788876433..33333444444 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.43
         CBF 131 esgvYdptk 139
                 +++v+  +k
  KHJ31859.1 356 DKKVFRTKK 364
                 244444433 PP

  == domain 3  score: 95.8 bits;  conditional E-value: 3.1e-31
         CBF   2 vqaLvllfqllskq..kqsel........lsasdRFyraLYrkLld.............................pelltsskralllnlly....... 54 
                 ++++ ++f ll++q  +   +        ls+   F+++LY+ L+                               +++ +++  lll+ +        
  KHJ31859.1 475 LLCIITAFVLLEGQeaA---KakttlnldLSF---FITHLYKILYAlsvdtsielnaisqyisqekesllskstsGKINYQTTAVLLLRSVSsiltppl 567
                 6899*********9652...224578999999...*********999***********999999999999999988899999999*******7777754 PP

         CBF  55 ..kalkadkpvkrvaAFvKRllqlalhappsfalgllallsellk.hppklkalleekfkdvkeeeeeekkeekkkskaesgvYdptkrdpeysnaeas 150
                   +     +p++r+aAFvK+ll+ ++h+p+++++++ +l+++++k h +k+ +l++      +ee     +      ++ +gv+dp + ++e sna+a+
  KHJ31859.1 568 aaQ----AVPPTRIAAFVKQLLTSCTHLPEKSCIAMTTLIRKVTKlHGKKIASLWN------TEE-----R------RG-DGVFDPLNCEVEGSNAFAT 644
                 444....45***********************************************......766.....4......45.9****************** PP

         CBF 151 slwElsllakhfhPtVal 168
                 ++wE +ll+khf P+V++
  KHJ31859.1 645 TIWEGELLKKHFSPAVRD 662
                 ****************86 PP

>> NOC3p  Nucleolar complex-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.6   0.2   5.4e-28   4.9e-24       4      94 .]     124     213 ..     121     213 .. 0.92

  Alignments for each domain:
  == domain 1  score: 84.6 bits;  conditional E-value: 5.4e-28
       NOC3p   4 eeiaslassil.edPeenlsllkrllklaeskdsavtvrklallsllaVfkDiiPgYrIrsltekekeekvskevkklrefEqkLlkvYkky 94 
                 e++a++a  +  +dPe+n++++krl++l ++++   +v++lal+++l+++kD+iPgYrIr++++++++ kvskevkklr++Eq+L++ Y+ky
  KHJ31859.1 124 EDLAKTALLLRdNDPEDNVDAFKRLAQLGQTTH--YEVKRLALMTQLTIYKDLIPGYRIRAISKEDQSVKVSKEVKKLRTYEQGLVTGYQKY 213
                 56666666664158*****************99..****************************999999**********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (675 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1494  (0.0833287); expected 358.6 (0.02)
Passed bias filter:                      578  (0.0322383); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.42
# Mc/sec: 4775.56
//
Query:       KHJ31860.1  [L=136]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.09   12.9   0.0       0.24   11.5   0.0    1.7  2  Rapsyn_N  Rapsyn N-terminal myristoylation and linker region


Domain annotation for each model (and alignments):
>> Rapsyn_N  Rapsyn N-terminal myristoylation and linker region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   1.3e-05      0.24      14      38 ..      17      41 ..      11      49 .. 0.88
   2 ?   -2.8   0.1      0.39   7.1e+03       6      18 ..      72      84 ..      66      95 .. 0.54

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 1.3e-05
    Rapsyn_N 14 LklyesndtekalrvWrkvLkktsd 38
                Lkly +n+ e+  r+W+  + k+ +
  KHJ31860.1 17 LKLYGQNNSEAPHRTWMAFFTKAPR 41
                9****************99888766 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.39
    Rapsyn_N  6 tkrkiekGLklye 18
                 k   + G + y+
  KHJ31860.1 72 MKTYRQAGEREYQ 84
                3333344444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       741  (0.0413297); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1032.50
//
Query:       KHJ31861.1  [L=113]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 852.71
//
Query:       KHJ31862.1  [L=329]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.038   14.1   0.5      0.038   14.1   0.5    3.0  3  zf-CCHC   Zinc knuckle
       0.21   12.0   0.2       0.21   12.0   0.2    1.8  2  GP68      Phage protein Gp68


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   1.4       1.4   1.2e+04       3       8 ..     199     204 ..     198     205 .. 0.79
   2 ?   14.1   0.5   4.2e-06     0.038       2      16 ..     216     230 ..     215     232 .. 0.91
   3 ?    5.3   1.6    0.0025        22       2       9 ..     235     242 ..     235     242 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.4
                 TSSSSS CS
     zf-CCHC   3 CynCGe 8  
                 C +C++
  KHJ31862.1 199 CKRCNG 204
                 999985 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 4.2e-06
                 CTSSSSSSSSTTTTS CS
     zf-CCHC   2 kCynCGepGHiardC 16 
                  C nCG++ H a  C
  KHJ31862.1 216 SCANCGSTNHTADIC 230
                 6***********999 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.0025
                 CTSSSSSS CS
     zf-CCHC   2 kCynCGep 9  
                 kC+nCG+p
  KHJ31862.1 235 KCRNCGGP 242
                 7*****86 PP

>> GP68  Phage protein Gp68
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.3       1.9   1.7e+04       6      21 ..     205     220 ..     203     225 .. 0.77
   2 ?   12.0   0.2   2.3e-05      0.21      18      65 ..     247     294 ..     234     300 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 1.9
        GP68   6 nhpslrspiaphetag 21 
                  hps     ap  + +
  KHJ31862.1 205 HHPSKNCSRAPSCANC 220
                 6999999999876555 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 2.3e-05
        GP68  18 etagvlrmrraGykGaailkllklrGtrlvnqmqraldaetaaaraGr 65 
                    ++ r  r+G   ++ lk  +  G r  n +qra  ae++aa   r
  KHJ31862.1 247 SRRCLARPTRSGAPTKEQLKTYRQMGEREYNAVQRAKVAEEKAASIDR 294
                 34689999**********************************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1046  (0.0583412); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2385.78
//
Query:       KHJ31863.1  [L=158]
Description: hypothetical protein EV44_g3033 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.6e-08   32.8   0.2    6.5e-08   32.3   0.2    1.2  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type
  ------ inclusion threshold ------
      0.062   13.8   0.5      0.087   13.4   0.5    1.2  1  PH               PH domain


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.2   7.2e-12   6.5e-08       2      79 ..      65     142 ..      64     149 .. 0.93

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 7.2e-12
  Retrotran_gag_2   2 kkkdakalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvn 79 
                      +k+d+  + +I++ + d++++l ++++take Wd+Lk+ y  + + +  +l++++ +l+ ++++sv   +++l  + n
       KHJ31863.1  65 QKQDECIRIAICQLVPDNVYHLFNSNSTAKEWWDNLKQYYCPNPMNKLDLLLEEFWQLESNDTTSVDALVQQLSHIRN 142
                      6899999************************************877777******************99999988766 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.5   9.7e-06     0.087      21      96 ..      24      97 ..       8     102 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 9.7e-06
                EEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEEC.TT.SSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHH CS
          PH 21 rwfvLkdsellyykndksekdkepkgsislsncevvevva.te.dpkrkfcfelriverngsrtyllqasseeerkeW 96
                rw + + ++l++++      d+ + ++ +lsnc+ + + + ++ + k++ c+++ i +  ++++y+l  s++  ++ W
  KHJ31863.1 24 RWSTQFLDVLSIFDLT----DYVLETKAELSNCQKKNILDmDRtTQKQDECIRIAICQLVPDNVYHLFNSNSTAKEWW 97
                7888888889999988....****************9999955599********888777789999998888888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       812  (0.0452898); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1224.80
//
Query:       KHJ31864.1  [L=1270]
Description: putative atp binding [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-25   90.3   0.1    4.3e-16   59.1   0.1    2.6  2  AAA_12           AAA domain
    4.3e-23   82.4   4.4    6.6e-14   52.3   0.0    2.9  3  AAA_11           AAA domain
    1.2e-08   35.4   0.0    1.7e-06   28.4   0.0    2.6  2  AAA_19           AAA domain
    9.4e-08   32.0   0.0    5.8e-05   22.9   0.0    2.3  2  AAA_30           AAA domain
    0.00031   20.6   0.1        1.5    8.5   0.0    3.8  4  Viral_helicase1  Viral (Superfamily 1) RNA helicase
     0.0019   18.3   0.3      0.016   15.2   0.0    2.3  2  ResIII           Type III restriction enzyme, res subunit
     0.0028   16.9   3.7      0.097   11.9   0.0    2.7  3  DUF2075          Uncharacterized conserved protein (DUF2075)
     0.0048   16.4   0.0      0.014   14.9   0.0    1.7  2  PhoH             PhoH-like protein
  ------ inclusion threshold ------
      0.035   13.8   0.0      0.081   12.6   0.0    1.5  1  IstB_IS21        IstB-like ATP binding protein


Domain annotation for each model (and alignments):
>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   1.6e-10   3.2e-07       2     118 ..     734     847 ..     733     848 .. 0.85
   2 !   59.1   0.1   2.2e-19   4.3e-16     143     198 ..     843     899 ..     836     900 .. 0.90

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 1.6e-10
      AAA_12   2 erSlferllkkekekvvlLdtqYRmhpeIsrf...psklfYkgkLkdaesvkkreleaqealeeplep.lvfidvekseeekekkeksyiNeeEaelvv 96 
                 + S+ferl++++  ++++L+ q Rm  eI ++     + fY+ +L d+esv +r+     a++    + ++f++ +  e ++ +   s +Ne Eae+vv
  KHJ31864.1 734 KVSMFERLINNN-LPYIVLNRQRRMITEIRELlciKPRPFYE-NLYDHESVLDRDIA-RPAVPGMGGKdTYFFHHNWPEARNLE--GSCYNEDEAEMVV 827
                 78**********.**************999862225678998.58999******999.77777776666999999988888876..8************ PP

      AAA_12  97 klvekllkkgseeerkkigvit 118
                 ++ ++l+ +  +    ki ++t
  KHJ31864.1 828 SFFNYLYLNKLDP--LKITILT 847
                 ******9998888..7888887 PP

  == domain 2  score: 59.1 bits;  conditional E-value: 2.2e-19
      AAA_12 143 ievnt.vdgfQGrekdviilslVRsnekkeigflkderrlNValTRAkskliivGnk 198
                 i++ t +dg+QG+e+dvi+lslVRsn++++igfl +++rl Val+RA++ l+++Gn+
  KHJ31864.1 843 ITILTvIDGYQGEENDVILLSLVRSNTQQSIGFLGNKNRLVVALSRARRGLYLFGNS 899
                 5555526************************************************96 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   0.0   3.3e-17   6.6e-14       2     141 ..     343     466 ..     342     528 .. 0.82
   2 !   30.5   0.0   1.6e-10   3.1e-07     195     257 ..     658     720 ..     578     724 .. 0.84
   3 ?   -2.0   1.7       1.3   2.5e+03     121     149 ..    1138    1177 ..    1080    1220 .. 0.52

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 3.3e-17
      AAA_11   2 lndsqreaiksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCapSNaAvDellerllrglldsegekykpkivRvgneeeri 100
                 +++sq +a++ ++++s  +++qGPPGtgKT + v+ l+ ++     ++ + ++p i v+a++N A D+ll  +++          +p+i+R+g + +r+
  KHJ31864.1 343 MDESQIRALYAMITRSV-AIVQGPPGTGKTYVSVSALRLMI-----NNLRLGNPPIIVSAQTNHALDQLLCHIMK---------FEPNIARLGGQFSRT 426
                 589**********9995.************99999999884.....45689************************.........***********99** PP

      AAA_11 101 seavksvsleekvekrlekeekaqlakeiskeleklakelr 141
                 ++++++ +l e  +++++  ++ ++  + +kel +l ++++
  KHJ31864.1 427 NTKIRERTLHELHSSNQNRGRDGEMG-RCRKELSRLVEKIK 466
                 *****************999866664.44444444444443 PP

  == domain 2  score: 30.5 bits;  conditional E-value: 1.6e-10
      AAA_11 195 eaeivltTlsgags..klleklakkfdvviIDEAaqavEpstliPlrlgakkvvLvGDpkQLpat 257
                   +++ +T sg ++   ll++l  + +v++I EAa  +E +++    + ++++++vGD++QL+a 
  KHJ31864.1 658 GIKVIGCTTSGLAKyrGLLSAL--QPRVLLIEEAAETLEGKVMAGTPESIQQIIMVGDHQQLQAS 720
                 4689******997511456666..9*************************************995 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 1.3
      AAA_11  121 e...........kaqlakeiskeleklakelrafeeeeek 149 
                  +           + +++++i +++++ +k+l+++++++ k
  KHJ31864.1 1138 HkhitvrngqrvTGKISQTIIEATNSTSKHLKKTTNDDLK 1177
                  0222222223333333444444444444444333333333 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.0   8.4e-10   1.7e-06       3     138 ..     349     506 ..     347     571 .. 0.76
   2 ?    4.2   0.0     0.025        51     105     142 ..     683     718 ..     606     722 .. 0.84

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 8.4e-10
      AAA_19   3 eave.alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgae..................atTiHrlal..... 77 
                 +a+   ++++v +v ++pGtGKT+v + +++l++++ ++   +i++ a t++A ++l   +  ++ e                   +T+H+l       
  KHJ31864.1 349 RALYaMITRSVAIVQGPPGTGKTYVSVSALRLMINNLRLGNPPIIVSAQTNHALDQLLCHI--MKFEpniarlggqfsrtntkirERTLHELHSsnqnr 445
                 6665478999******************************9****************9998..333347999999999999999999999995544444 PP

      AAA_19  78 ................ldfddlltealelleeaeeekklqeee.llivDEfqdvd.elqyrLlkallgek.kklllvGDp 138
                                 +                   +k+++    l+ D    +d   +y+++++   ++   +  vGD+
  KHJ31864.1 446 grdgemgrcrkelsrlV-------------------EKIKDILaPLLTDNLLTLDlLIEYKIINEKQRQSfSAVNWVGDE 506
                 43333333332222220...................33333333566666666666666666666665555556666664 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.025
      AAA_19 105 llivDEfqdvdelqyrLlkallgekkklllvGDpdQli 142
                 +l++ E+ +   l+ +++   +++ +++++vGD++Ql 
  KHJ31864.1 683 VLLIEEAAE--TLEGKVMAGTPESIQQIIMVGDHQQLQ 718
                 566666554..4666777778855599*********86 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   2.9e-08   5.8e-05       2      80 ..     343     442 ..     342     464 .. 0.74
   2 !    6.6   0.0    0.0028       5.6      90     130 ..     682     719 ..     637     722 .. 0.67

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 2.9e-08
      AAA_30   2 lnaeQaaavealltsgdrvavltGpAGtGKtta.lkalreaweaag...grviglAptgkaAkvLa...................eelgieastiakll 77 
                 ++++Q +a+ a++t +  va+++Gp+GtGKt++ ++alr ++++      ++i+ A t+ a ++L                    +++ i+ +t+++l 
  KHJ31864.1 343 MDESQIRALYAMITRS--VAIVQGPPGTGKTYVsVSALRLMINNLRlgnPPIIVSAQTNHALDQLLchimkfepniarlggqfsrTNTKIRERTLHELH 439
                 6789*****9999999..9************97356667777776556799**********99987566666555555555444445556666666666 PP

      AAA_30  78 krl 80 
                 +++
  KHJ31864.1 440 SSN 442
                 555 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0028
      AAA_30  90 tllivDEagmv.dtkqlaallkaaekagakvilvGDerQlas 130
                 ++l++ Ea+ +   k +a       ++  ++i+vGD++Ql++
  KHJ31864.1 682 RVLLIEEAAETlEGKVMA----GTPESIQQIIMVGDHQQLQA 719
                 677777765432334444....44444456**********97 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.0    0.0068        14       2      55 ..     361     414 ..     360     423 .. 0.76
   2 ?    1.4   0.0      0.11   2.1e+02      84     122 ..     701     738 ..     669     763 .. 0.74
   3 !    8.5   0.0   0.00077       1.5     189     233 ..     850     896 ..     835     897 .. 0.75
   4 ?   -2.4   0.3       1.6   3.3e+03     110     154 ..    1126    1169 ..    1113    1195 .. 0.55

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0068
  Viral_helicase1   2 vvhGvpGcGKStlirkllrts.liltvnrptaelltegkpklpnlsvrtvdsflm 55 
                      +v+G pG GK+ + +++lr    +l+ ++p  ++++++ + + ++    +++f++
       KHJ31864.1 361 IVQGPPGTGKTYVSVSALRLMiNNLRLGNP-PIIVSAQTNHALDQLLCHIMKFEP 414
                      79*****************98888888888.666666665555555556666666 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.11
  Viral_helicase1  84 alskaklvilfGDplQipfhsrnasfllahlpsslshrv 122
                      + ++++++i++GD++Q   + +  s +   ++ ++s  +
       KHJ31864.1 701 TPESIQQIIMVGDHQQLQASCTIRSLEEEPYNMKVS-MF 738
                      5578899*********99999888888777777773.33 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00077
  Viral_helicase1 189 hevqGltfdkVtlvllketdlelis..esrenllvAlTRhrkslvil 233
                       + qG++ d+  l l ++++++ i    +++ l+vAl+R+r++l+++
       KHJ31864.1 850 DGYQGEENDVILLSLVRSNTQQSIGflGNKNRLVVALSRARRGLYLF 896
                      56789888887665555555454446788**************9876 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 1.6
  Viral_helicase1  110 llahlpsslshrvgrrttyllpsdvaeilsak..vgteveversgel 154 
                       +++++p ++ h + +++t ++++ v+ + s+   +    ++++++  
       KHJ31864.1 1126 KNKNYPIEY-HDSHKHITVRNGQRVTGKISQTiiE--ATNSTSKHLK 1169
                       556666666.7777777777777777777777321..2222222222 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0     8e-06     0.016       8      94 ..     347     435 ..     340     458 .. 0.73
   2 ?   -0.5   0.6      0.55   1.1e+03      90     122 ..    1125    1166 ..    1089    1221 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 8e-06
                 HHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.......-EEEEESSHHHHHHHHHHGGGGTGG..........GEEEESSS-B CS
      ResIII   8 QeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee..kflflvprkslleqtleefkkflseayke......igkkvsgdkk 94 
                 Q++a+ +++       +  ++++ + GtGKT+v++++ + + ++ +     +++ +++++ l+q+l +++kf ++ +        +++k+++++ 
  KHJ31864.1 347 QIRALYAMI------TRSVAIVQGPPGTGKTYVSVSALRLMINNLRLGnpPIIVSAQTNHALDQLLCHIMKFEPNIARLggqfsrTNTKIRERTL 435
                 555555554......345678999***********99999999877656699*********************9986543333333333333333 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.55
                  SSS-B--............-SEEEEEHHHHHHTH............. CS
      ResIII   90 sgdkkka.....kekdstnkkilvttiqsldadseee.........e 122 
                  +     +      e+++++k+i+v + q+++ +++++         +
  KHJ31864.1 1125 Q-----KnknypIEYHDSHKHITVRNGQRVTGKISQTiieatnstsK 1166
                  2.....12334468899999999999999998886667766633330 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   4.9e-05     0.097       2      25 ..     358     381 ..     357     445 .. 0.74
   2 !    5.6   0.1     0.004       7.9     343     360 ..     879     896 ..     863     898 .. 0.89
   3 ?   -3.7   0.5       2.7   5.3e+03     197     264 ..    1127    1198 ..    1107    1213 .. 0.41

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.9e-05
     DUF2075   2 avvlVtGvaGtGKtvvllnllael 25 
                 +v +V+G +GtGKt+v +++l  +
  KHJ31864.1 358 SVAIVQGPPGTGKTYVSVSALRLM 381
                 799*************99887655 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.004
     DUF2075 343 kNayrVLLtRGrkGlyiy 360
                 kN++ V L+R+r+Gly++
  KHJ31864.1 879 KNRLVVALSRARRGLYLF 896
                 8***************98 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 2.7
     DUF2075  197 qenfdirvfddleelkkalkeknkesgrsrlv.atydakrl.aekkkkkskekdvkiee.gd.fklpWnlee 264 
                  ++n++i+  d+ + +     ++ +++ +  ++ at   +++ ++ ++++ k++  +  + ++    +Wn++ 
  KHJ31864.1 1127 NKNYPIEYHDSHKHITVRNGQRVTGKISQTIIeATNSTSKHlKKTTNDDLKPTRKNLYSeDKlSAKNWNRNF 1198
                  666666666665544433333322222222221222222222222222222222222111121233555554 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0       4.6   9.1e+03     138     157 ..     161     180 ..     144     196 .. 0.79
   2 !   14.9   0.0   6.9e-06     0.014       6      39 ..     344     377 ..     342     389 .. 0.87

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 4.6
                 HHHTTB-TT-EEEEEE---- CS
        PhoH 138 mfltRlGenskvvvtGdvtq 157
                  fltR G  ++v ++ d + 
  KHJ31864.1 161 WFLTRQGPACRVEFCVDRSE 180
                 69999999999988877665 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 6.9e-06
                 SHHHHHHHHHHHH-SEEEEE--TTSSTTHHHHHH CS
        PhoH   6 tkeQkeylealkkndivfaiGpaGtGKtylaval 39 
                 +++Q ++l a+ + ++ ++ Gp GtGKty++v++
  KHJ31864.1 344 DESQIRALYAMITRSVAIVQGPPGTGKTYVSVSA 377
                 678999999*********************9974 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   4.1e-05     0.081       7      66 ..     320     376 ..     317     385 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.1e-05
   IstB_IS21   7 rlrlaklpaqktledidfraarsldkrkvkeLatlsfiekkenivllGpsGvGKshlaia 66 
                 + r+  l++ + l+d+  ++  ++d+ ++++L ++  i+ +   ++ Gp+G+GK++++++
  KHJ31864.1 320 QNRTCDLKNVNILQDFSQNFDFGMDESQIRALYAM--IT-RSVAIVQGPPGTGKTYVSVS 376
                 5678899999********************99864..55.5567789*********9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1270 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       849  (0.0473534); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.84u 0.28s 00:00:01.12 Elapsed: 00:00:00.43
# Mc/sec: 8846.00
//
Query:       KHJ31865.1  [L=1275]
Description: putative eukaryotic translation initiation factor 3 subunit clu1 tif31 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.6e-80  268.6   0.0    7.4e-80  267.9   0.0    1.4  1  CLU        Clustered mitochondria
    8.6e-49  165.9   0.0    1.9e-48  164.8   0.0    1.6  1  eIF3_p135  Translation initiation factor eIF3 subunit 135
    6.3e-25   87.3   5.0      3e-09   37.0   0.1    3.7  3  TPR_12     Tetratricopeptide repeat
    5.1e-22   77.0   0.2    1.5e-08   34.2   0.1    4.7  4  TPR_10     Tetratricopeptide repeat
    7.3e-20   71.1   0.4    1.9e-19   69.8   0.4    1.8  1  CLU_N      Mitochondrial function, CLU-N-term
    0.00014   21.8   2.2     0.0022   18.0   0.2    3.7  4  TPR_8      Tetratricopeptide repeat
    0.00016   21.5   1.0      0.051   13.7   0.2    4.4  4  TPR_2      Tetratricopeptide repeat
     0.0014   18.9   1.3         10    6.8   0.0    4.5  4  TPR_17     Tetratricopeptide repeat
     0.0016   18.5   0.0     0.0042   17.1   0.0    1.7  1  DUF727     Protein of unknown function (DUF727)
  ------ inclusion threshold ------
      0.019   15.0   2.3          5    7.4   0.0    4.2  4  TPR_7      Tetratricopeptide repeat
      0.023   14.5   0.2        1.3    8.9   0.1    2.9  2  TPR_1      Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> CLU  Clustered mitochondria
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  267.9   0.0   4.6e-83   7.4e-80       1     221 []     357     579 ..     357     579 .. 0.98

  Alignments for each domain:
  == domain 1  score: 267.9 bits;  conditional E-value: 4.6e-83
         CLU   1 DWNeefqslrelpketlqerlereralsklasdFveaAtkgakaiikenilplnpkekpggqkylvnniffsfavDakgsyeslggdeaarkaagkdLk 99 
                 DWNeefqs+relpke++q+r+ rer++skl++dF+eaA++ga+ +++++i+plnp+e++++q++++nniffsf++D  g++++ ggdeaar+a+gkd+ 
  KHJ31865.1 357 DWNEEFQSTRELPKENIQNRVFRERLISKLCADFTEAAARGAILVARGEITPLNPTEAKEAQIFVYNNIFFSFGADGVGTFAMEGGDEAARVATGKDVL 455
                 9************************************************************************************************** PP

         CLU 100 glkllnrldvkglytlltaivDYrGkRliaqsllPgilkkekei..tivYGssdggktvhsdeefhellkkvakalnlkehkvkdeegkevklylsadi 196
                 g++++n+ld+k+lyt +t+ivDY GkR++aqs++Pgi+k++     +i YG +dg + +++de+f+++++k++kal++k+h v+d++gk  +l++s+++
  KHJ31865.1 456 GVRIVNQLDIKDLYTAGTVIVDYLGKRIVAQSIVPGIFKQRGPGenQIDYGAVDGRDVIAADERFSSVFEKLSKALKVKRHRVWDKNGKGFDLHGSIET 554
                 ***************************************7665455***************************************************** PP

         CLU 197 kgivgsDgrkYllDlarlfPpdvnf 221
                 kg++g+DgrkY+lDl+r++P+d+++
  KHJ31865.1 555 KGLLGTDGRKYVLDLYRITPLDIEW 579
                 **********************998 PP

>> eIF3_p135  Translation initiation factor eIF3 subunit 135
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.8   0.0   1.1e-51   1.9e-48       3     176 .]     742     902 ..     740     902 .. 0.95

  Alignments for each domain:
  == domain 1  score: 164.8 bits;  conditional E-value: 1.1e-51
   eIF3_p135   3 apiDGqsLtelLHkrGINvRYLGkvakklekeeakarlealkrllvqEmiaRaaKhilrkylqsvealllsaavshflnClLgseenskpkvsidellk 101
                 +p+DGqsL++lLHkrGIN+RY+Gk+a+ l++e   +rle lk l +qEmi Ra+Kh+ ++yl++++ +l s+++sh+lnC+Lg e n+kp   ide ++
  KHJ31865.1 742 CPMDGQSLSRLLHKRGINIRYIGKIAS-LSDE---KRLEPLKILSIQEMISRAFKHVSSRYLKNLPIPLSSSCISHLLNCFLGIELNPKPIPFIDEDMA 836
                 8*************************7.4444...48************************************************************** PP

   eIF3_p135 102 klykkkkkkknkkkesewtkltpeslweqiekevkarfryeleedsieeelkkislLReiclkvGiqlllreYnf 176
                 +ly+      n+    e++ +tp+sl ++ie  v +rf+y l+e +i+ e+kki++LRe++lk+G+ql +r++ f
  KHJ31865.1 837 SLYR----GLNL----EFQIVTPQSLQQEIEISVMKRFQYVLKEGWIS-EIKKIQMLREVSLKLGLQLGARDFVF 902
                 ***9....4455....9*******************************.***********************987 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.7   4.1e-10   6.7e-07      13      72 ..     983    1040 ..     972    1045 .. 0.91
   2 !   30.0   0.2   2.9e-10   4.7e-07       3      58 ..    1055    1110 ..    1053    1112 .. 0.93
   3 !   37.0   0.1   1.8e-12     3e-09       4      75 ..    1098    1169 ..    1098    1171 .. 0.96

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 4.1e-10
      TPR_12   13 lrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeal 72  
                  l+ +++    +ell ++l ++++++G  hp++a++++nL++ly++l++ e+A+el ++a+
  KHJ31865.1  983 LQNQKK--LGQELLLESLSLHEQIYGIIHPEVARVYNNLSMLYYQLEEKEAAVELARKAV 1040
                  556666..789**********************************************995 PP

  == domain 2  score: 30.0 bits;  conditional E-value: 2.9e-10
      TPR_12    3 atalnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyral 58  
                  + ++ nl+++ +++g+  +Al++  +al+i+r ++G  hp+ +ttl+n + +++ l
  KHJ31865.1 1055 LLSYLNLGLFSHAAGETVQALTYITHALDIWRIIYGNSHPDSITTLNNAAVMLQHL 1110
                  56788**********************************************99876 PP

  == domain 3  score: 37.0 bits;  conditional E-value: 1.8e-12
      TPR_12    4 talnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75  
                  t+lnn a++l++l+ ++ ++ ++e++l+i+++++Gp++ ++at l+ L++++ + ++ ++A+ + + +++i+
  KHJ31865.1 1098 TTLNNAAVMLQHLKYFHSSRLWFEASLDICSSIYGPNSINAATLLFQLAQALALDNDSKQAVIRMKSSYNIF 1169
                  5899****************************************************************9997 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.024        39      23      42 .]     992    1011 ..     984    1011 .. 0.92
   2 !   34.2   0.1   9.1e-12   1.5e-08       1      42 []    1012    1053 ..    1012    1053 .. 0.97
   3 !   20.0   0.0   2.7e-07   0.00044       1      42 []    1054    1095 ..    1054    1095 .. 0.98
   4 !   12.8   0.0     5e-05     0.082       3      40 ..    1098    1135 ..    1096    1137 .. 0.95

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.024
      TPR_10   23 alleealairrrllGpdHPd 42  
                  +ll e+l+++++++G  HP+
  KHJ31865.1  992 ELLLESLSLHEQIYGIIHPE 1011
                  6899**************96 PP

  == domain 2  score: 34.2 bits;  conditional E-value: 9.1e-12
      TPR_10    1 tAsslnNLanalrqrgrydeAealleealairrrllGpdHPd 42  
                  +A+ +nNL+++++q+ + ++A++l+++a+ + +r+lG d P+
  KHJ31865.1 1012 VARVYNNLSMLYYQLEEKEAAVELARKAVVVSERTLGVDNPE 1053
                  699************************************996 PP

  == domain 3  score: 20.0 bits;  conditional E-value: 2.7e-07
      TPR_10    1 tAsslnNLanalrqrgrydeAealleealairrrllGpdHPd 42  
                  t+ s+ NL+   ++ g+  +A+ +  +al+i+r ++G+ HPd
  KHJ31865.1 1054 TLLSYLNLGLFSHAAGETVQALTYITHALDIWRIIYGNSHPD 1095
                  7889*************************************9 PP

  == domain 4  score: 12.8 bits;  conditional E-value: 5e-05
      TPR_10    3 sslnNLanalrqrgrydeAealleealairrrllGpdH 40  
                  ++lnN a++l++++ ++ ++ ++e +l+i+  ++Gp++
  KHJ31865.1 1098 TTLNNAAVMLQHLKYFHSSRLWFEASLDICSSIYGPNS 1135
                  89*********************************997 PP

>> CLU_N  Mitochondrial function, CLU-N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.8   0.4   1.2e-22   1.9e-19       2      79 .]      72     144 ..      71     144 .. 0.96

  Alignments for each domain:
  == domain 1  score: 69.8 bits;  conditional E-value: 1.2e-22
       CLU_N   2 setvqdlrqvLselpstkylTnyhLkyengngerlnefvtlseiieeedvdelkLelkekpYterealeHvlrfReli 79 
                 +e ++d++q+++e p t++++++hL++   +g+r+n+f+ +sei  e   +e +L+l e+pY e+ea++H++r+Reli
  KHJ31865.1  72 QEVIHDVHQLVTEQPGTFQYSCFHLEH---KGKRVNDFTIISEI--ETLMNEPELTLIEDPYSEKEARIHFVRIRELI 144
                 788**********************99...68************..8889**************************98 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.2   1.4e-06    0.0022       1      28 [.    1013    1040 ..    1013    1043 .. 0.96
   2 ?   -0.9   0.0       1.6   2.7e+03       3      30 ..    1057    1084 ..    1056    1084 .. 0.89
   3 ?   -0.5   0.0       1.2     2e+03       3      30 ..    1099    1126 ..    1097    1129 .. 0.88
   4 ?   -1.7   0.0       2.8   4.6e+03       2      21 ..    1140    1159 ..    1139    1160 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 1.4e-06
                  CCHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8    1 aeayynlgsiylklgdyeeAkeyyekal 28  
                  a++y+nl+++y +l+++e+A+e  +ka+
  KHJ31865.1 1013 ARVYNNLSMLYYQLEEKEAAVELARKAV 1040
                  79************************97 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.6
                  HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_8    3 ayynlgsiylklgdyeeAkeyyekalel 30  
                  +y+nlg+  +  g+  +A  y+ +al++
  KHJ31865.1 1057 SYLNLGLFSHAAGETVQALTYITHALDI 1084
                  6999999999999999999999999976 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 1.2
                  HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_8    3 ayynlgsiylklgdyeeAkeyyekalel 30  
                   ++n +  ++ l+ ++++  ++e  l++
  KHJ31865.1 1099 TLNNAAVMLQHLKYFHSSRLWFEASLDI 1126
                  578999999**************99988 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 2.8
                  CHHHHHHHHHHHTT-HHHHH CS
       TPR_8    2 eayynlgsiylklgdyeeAk 21  
                   ++++l++++   +d ++A+
  KHJ31865.1 1140 TLLFQLAQALALDNDSKQAV 1159
                  678999*9999999999886 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.2   3.1e-05     0.051       1      28 [.    1013    1040 ..    1013    1044 .. 0.94
   2 ?    1.2   0.0      0.33   5.3e+02       4      29 ..    1058    1083 ..    1056    1084 .. 0.89
   3 ?    0.1   0.0      0.72   1.2e+03       4      31 ..    1100    1127 ..    1098    1129 .. 0.91
   4 ?   -0.6   0.0       1.2   1.9e+03       2      20 ..    1140    1158 ..    1139    1160 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 3.1e-05
       TPR_2    1 aealynlGlayyklgdyeeAleafekAl 28  
                  a++++nl ++yy+l + e A+e+ +kA+
  KHJ31865.1 1013 ARVYNNLSMLYYQLEEKEAAVELARKAV 1040
                  689***********************97 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.33
       TPR_2    4 lynlGlayyklgdyeeAleafekAle 29  
                  + nlGl   ++g+  +Al +   Al 
  KHJ31865.1 1058 YLNLGLFSHAAGETVQALTYITHALD 1083
                  789999999************99997 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.72
       TPR_2    4 lynlGlayyklgdyeeAleafekAleld 31  
                  l+n +  + +l+ +   + +fe++l ++
  KHJ31865.1 1100 LNNAAVMLQHLKYFHSSRLWFEASLDIC 1127
                  78999******************99886 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 1.2
       TPR_2    2 ealynlGlayyklgdyeeA 20  
                   +l++l++a++  +d ++A
  KHJ31865.1 1140 TLLFQLAQALALDNDSKQA 1158
                  6789999999988887777 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       3.3   5.4e+03       4      18 ..     211     225 ..     211     226 .. 0.90
   2 ?    5.9   0.0     0.012        20       9      33 ..    1009    1033 ..    1007    1034 .. 0.89
   3 ?    1.2   0.0      0.38   6.2e+02      15      33 ..    1057    1075 ..    1051    1076 .. 0.90
   4 !    6.8   0.0    0.0062        10      12      33 ..    1135    1159 ..    1120    1160 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 3.3
      TPR_17   4 kaleldPnnadaynn 18 
                 k+l l P ++++y++
  KHJ31865.1 211 KSLSLSPWHPPPYHL 225
                 7999*********97 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.012
      TPR_17    9 dPnnadaynnLAelllknGdlmtAr 33  
                  +P  a +ynnL  l++++ +++ A+
  KHJ31865.1 1009 HPEVARVYNNLSMLYYQLEEKEAAV 1033
                  788899************9999986 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.38
      TPR_17   15 aynnLAelllknGdlmtAr 33  
                  +y nL+ + + +G++ +A+
  KHJ31865.1 1057 SYLNLGLFSHAAGETVQAL 1075
                  8**************9996 PP

  == domain 4  score: 6.8 bits;  conditional E-value: 0.0062
      TPR_17   12 n...adaynnLAelllknGdlmtAr 33  
                  +   a ++++LA++l+  +d+++A+
  KHJ31865.1 1135 SinaATLLFQLAQALALDNDSKQAV 1159
                  4455899***************995 PP

>> DUF727  Protein of unknown function (DUF727)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   2.6e-06    0.0042      25      98 ..     225     298 ..     206     303 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 2.6e-06
      DUF727  25 lpsteeviylnvetlEgeelcvelsakGfrvvsskydeveeeeekedeekyfetlyaLLdkiSpeyrekFgekl 98 
                 l+++ +++y+ ++t Ege++ +  +++Gf v  s++ + + + + + +  +  +l  LL +iSp++   F++ l
  KHJ31865.1 225 LRQKGHLLYILLTTNEGEQYQITSCVSGFYVNKSSNMKFDPFPRISSKAYSAHSLLTLLGDISPSFLGCFEKLL 298
                 778899************************99998888866666666666668999***********9998765 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1     0.095   1.5e+02       2      30 ..    1016    1042 ..    1015    1048 .. 0.86
   2 ?    7.4   0.0    0.0031         5       1      32 [.    1057    1088 ..    1057    1092 .. 0.88
   3 ?    0.4   0.0      0.53   8.7e+02       1      35 [.    1099    1133 ..    1099    1134 .. 0.92
   4 ?   -0.6   0.1       1.1   1.8e+03       2      19 ..    1142    1159 ..    1141    1162 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.095
       TPR_7    2 LlnLarlysrlGdyeeAielyeqsLaltk 30  
                  ++nL  ly +l + e A+el ++  a+  
  KHJ31865.1 1016 YNNLSMLYYQLEEKEAAVELARK--AVVV 1042
                  89******************999..6654 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0031
       TPR_7    1 aLlnLarlysrlGdyeeAielyeqsLaltkdp 32  
                  ++lnL+   ++ G++ +A+++ + +L +++  
  KHJ31865.1 1057 SYLNLGLFSHAAGETVQALTYITHALDIWRII 1088
                  79**********************99887765 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.53
       TPR_7    1 aLlnLarlysrlGdyeeAielyeqsLaltkdpeda 35  
                  +L+n a++ + l ++      +e+sL ++++ +++
  KHJ31865.1 1099 TLNNAAVMLQHLKYFHSSRLWFEASLDICSSIYGP 1133
                  799*************************9999886 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 1.1
       TPR_7    2 LlnLarlysrlGdyeeAi 19  
                  L++La++   ++d ++A+
  KHJ31865.1 1142 LFQLAQALALDNDSKQAV 1159
                  789999999999999997 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.1   0.00082       1.3       1      28 [.    1013    1040 ..    1013    1044 .. 0.93
   2 ?    2.2   0.0      0.11   1.7e+02       3      30 ..    1057    1084 ..    1056    1086 .. 0.92

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00082
                  HHHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_1    1 akalynlGnayfklgkydeAleyyekAL 28  
                  a++++nl ++y++l++ + A+e  +kA+
  KHJ31865.1 1013 ARVYNNLSMLYYQLEEKEAAVELARKAV 1040
                  789********************99996 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.11
                  HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1    3 alynlGnayfklgkydeAleyyekALel 30  
                  ++ nlG+  +  g+  +Al y   AL +
  KHJ31865.1 1057 SYLNLGLFSHAAGETVQALTYITHALDI 1084
                  699*******************999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       636  (0.0354733); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.83u 0.27s 00:00:01.10 Elapsed: 00:00:00.44
# Mc/sec: 8762.49
//
Query:       KHJ31866.1  [L=605]
Description: putative snorna binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-10   41.3   0.0    5.1e-10   39.9   0.0    1.7  1  Gly_transf_sug  Glycosyltransferase sugar-binding region cont
  ------ inclusion threshold ------
      0.024   14.0   0.2      0.041   13.2   0.2    1.3  1  TcdA_TcdB       TcdA/TcdB catalytic glycosyltransferase domai


Domain annotation for each model (and alignments):
>> Gly_transf_sug  Glycosyltransferase sugar-binding region containing DXD motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9   0.0   5.6e-14   5.1e-10      46      93 ..     312     359 ..     279     365 .. 0.80

  Alignments for each domain:
  == domain 1  score: 39.9 bits;  conditional E-value: 5.6e-14
  Gly_transf_sug  46 wfeeakk.llplfialsDllRlaiLykyGGiYlDtDvivlkslrnsiga 93 
                     w+  ++k + +l++a sD++R+ iL  yGG+Y+D+Dvi+l+++  ++++
      KHJ31866.1 312 WLVLTEKqMTFLPVAVSDAVRFIILHLYGGVYFDMDVIMLRDM-RPLLI 359
                     5444444488999******************************.44443 PP

>> TcdA_TcdB  TcdA/TcdB catalytic glycosyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   4.6e-06     0.041     199     221 ..     326     348 ..     324     355 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 4.6e-06
                 HHHHHHHHHHHHHH-EEEE-TT- CS
   TcdA_TcdB 199 AAsDivRllvLkelGGlyldvDm 221
                 A sD vR  +L+ +GG+y+d+D+
  KHJ31866.1 326 AVSDAVRFIILHLYGGVYFDMDV 348
                 88********************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 4584.16
//
Query:       KHJ31867.1  [L=984]
Description: hypothetical protein EV44_g2295 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (984 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       898  (0.0500865); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.70u 0.27s 00:00:00.97 Elapsed: 00:00:00.42
# Mc/sec: 7040.33
//
Query:       KHJ31868.1  [L=85]
Description: hypothetical protein EV44_g1314 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.018   14.3   0.8      0.021   14.1   0.8    1.0  1  Closter_coat  Closterovirus coat protein
      0.034   13.5   0.2      0.039   13.3   0.2    1.0  1  DUF5309       Family of unknown function (DUF5309)
      0.081   12.6   0.1      0.088   12.5   0.1    1.0  1  Tmemb_185A    Transmembrane Fragile-X-F protein


Domain annotation for each model (and alignments):
>> Closter_coat  Closterovirus coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.8   3.6e-06     0.021       9      73 ..      14      82 ..       9      84 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 3.6e-06
  Closter_coat  9 vdasklneeevkellekfkealktklklsdedilvhlalllyrlanlsTSeKvky....ndentyvidg 73
                   + ++ n+ e+k ++e +  +l++ +k+  e++ +  a ++ +l n +TS K +     ++++ yv ++
    KHJ31868.1 14 QQDDQQNGHEKKFTMEDLHFMLQELYKAIMEKVFMENAAMFAALKNETTSIKKEHndlsKGCQKYVLEQ 82
                  566778999******************9999999******************99855555666666655 PP

>> DUF5309  Family of unknown function (DUF5309)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.2   6.5e-06     0.039     146     211 ..      18      78 ..       5      81 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 6.5e-06
     DUF5309 146 atdGtqralteallkevlqklyqaGgneklvlvsadlkevfsafslryevtaeakdnklgatvdvy 211
                 +++G ++++t ++l  +lq+ly+a   ek+ + +a++  ++++   +++ + ++++n+l    ++y
  KHJ31868.1  18 QQNGHEKKFTMEDLHFMLQELYKAI-MEKVFMENAAMFAALKN---ETTSI-KKEHNDLSKGCQKY 78 
                 579*********************9.899999******99999...44444.46788888887777 PP

>> Tmemb_185A  Transmembrane Fragile-X-F protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   1.5e-05     0.088     111     152 ..      20      61 ..       4      70 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.5e-05
  Tmemb_185A 111 rpgeeeslsdeaiwellrhfwvaismvffvaatvflllkldg 152
                   +e+++++++  ++l++++   ++ vf+++a +f++lk + 
  KHJ31868.1  20 NGHEKKFTMEDLHFMLQELYKAIMEKVFMENAAMFAALKNET 61 
                 4567778889999*************************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1046  (0.0583412); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.21s 00:00:00.55 Elapsed: 00:00:00.36
# Mc/sec: 709.50
//
Query:       KHJ31869.1  [L=524]
Description: putative six-hairpin glycosidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   5.6e-138  460.4   9.8   6.9e-138  460.1   9.8    1.0  1  Glyco_hydro_76  Glycosyl hydrolase family 76


Domain annotation for each model (and alignments):
>> Glyco_hydro_76  Glycosyl hydrolase family 76
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  460.1   9.8  3.9e-142  6.9e-138       1     362 [.      27     391 ..      27     394 .. 0.98

  Alignments for each domain:
  == domain 1  score: 460.1 bits;  conditional E-value: 3.9e-142
                     SXHHHHHHHHHHHHHHCETT..ECCTCTCBSCES-GHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHCCCTCEE-SSSTTCTCSSEHHHHHHHH CS
  Glyco_hydro_76   1 siksaaatiakgllkyYkgn..esggtpgnlpdpyywWeagalfgalidywrltgdstyndlitqallaqagenydympanqsrtegnDDqafwg 93 
                     sik+aa+tia++++kyY+gn  ++++t+  lp+pyywWe ga++ga++dy+++tgd +y ++++qal +q+g+++d+m++ ++++egnDDqafwg
      KHJ31869.1  27 SIKNAASTIAYSMMKYYTGNvsNTESTIAVLPPPYYWWESGAMWGAMLDYQHYTGDLSYAQVVSQALSSQRGPKNDFMAPLHTKDEGNDDQAFWG 121
                     79******************88888********************************************************************** PP

                     HHHHHHHHH.....H--HHHHHHHHHHHHHHHHCB-SCSCCS-BBSEC..ESS--SEEEHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHH CS
  Glyco_hydro_76  94 laamtaaernfpeptdepswLalAqavfntqasrwdeetcgGGlrWqiftwnsgydyknsisngplfqlaarLarytgnetYlewAekvwdWved 188
                     +a m+aae nfp p +  +w+ l+++++ntq+ rwd ++cgGGlrWqif++n+gydykn++sn+++fql+arLar+tgn+tY++wA+k +dW+++
      KHJ31869.1 122 FATMSAAEKNFPYPGSGITWIGLTENLWNTQVGRWDISSCGGGLRWQIFDFNKGYDYKNTVSNAAFFQLSARLARFTGNQTYADWANKSYDWMVQ 216
                     **************99******************************************************************************* PP

                     HSCSBTTTS-B-SEEETTTCCEEEE---HHHHHHHHHHHHHHHHHHH.--HHHHHHHHHHHHHHHHHCEEC..TTEEEEEE-TTSTTCCTTHHHH CS
  Glyco_hydro_76 189 vgliddedwlvyDgasvednctdinklqwtYnqGtylsgaaylynaT.gdekWldrvkgllnatlstffpd..gnilyevacepsekcnnDqrsF 280
                     ++li d +++v+Dg+ ++++c din+l+wtYn+++++ gaa++ n+T  +  W +rv+g+l++t s+f p+   ++++e  ce++++cn+Dq+sF
      KHJ31869.1 217 MKLI-DPEYRVFDGI-DSNQCHDINQLEWTYNHAIIIYGAAVMQNHTnASPIWVERVQGFLEKTTSFFGPEviPKVMFEPICETQSSCNTDQQSF 309
                     ****.**********.999****************************5556*************9999999**9********************* PP

                     HHHHHHHHHHHH..SHHHHHHHHHHHHHHHHHHHTTTB...TTTSB-TTTTTSSCCHHHHHHHHCCHHH............H CS
  Glyco_hydro_76 281 kgilarwlaltaqlapetadtiepllrasaeaaakscsggsdgttcglkwlkgtwdgdaglgeqmsaleviqallveekkap 362
                     k++l+r+l + + +ap+++++i+ ll +sa+aaa scsggsdg+ cg kw+ +++dg++g+ge m+ale+iq llv+++ ap
      KHJ31869.1 310 KAYLSRFLWASTIMAPSISEKITHLLTTSAKAAAISCSGGSDGKICGEKWYVDGYDGSNGVGEYMAALEIIQGLLVKKSIAP 391
                     ****************************************************************************996555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (524 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       556  (0.0310112); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 3836.06
//
Query:       KHJ31870.1  [L=286]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.035   12.9   0.1      0.049   12.4   0.1    1.1  1  Prd1-P2   Bacteriophage Prd1, adsorption protein P2


Domain annotation for each model (and alignments):
>> Prd1-P2  Bacteriophage Prd1, adsorption protein P2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   2.7e-06     0.049     165     217 ..      34      88 ..      14     104 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.7e-06
                 TT--EEEE--EE-TTS--B----EE-BSSS-EEEE-..TTTTTSS-SEEEEE--B CS
     Prd1-P2 165 etlepgqtepliksdgvysnsgiasfifdrpvtepn..pnwpplpppvipiiypt 217
                  tl  g  + ++ s  vy  s ia f     v+ p   p +p  ppp +pii  +
  KHJ31870.1  34 ATLATGSQNNFVVSLKVYLRSAIAHFQRSGTVATPPtlPSYPTGPPPAVPIIKNA 88 
                 68999999******************9999998874459************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2133.29
//
Query:       KHJ31871.1  [L=152]
Description: hypothetical protein EV44_g3680 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1188.25
//
Query:       KHJ31872.1  [L=82]
Description: hypothetical protein EV44_g3848 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.093   13.1   0.2       0.13   12.7   0.2    1.2  1  FlaC_arch  Flagella accessory protein C (FlaC)


Domain annotation for each model (and alignments):
>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.2   7.2e-06      0.13      15      41 ..      38      64 ..      25      65 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 7.2e-06
   FlaC_arch 15 eletvkkeneelsksveelkenVkdll 41
                 +e++ ++n++ s ++e+++e++ +l+
  KHJ31872.1 38 AIESAVNQNQNHSPDIEMIDEEIDKLI 64
                5889999******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       843  (0.0470188); expected 358.6 (0.02)
Passed bias filter:                      586  (0.0326845); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 621.53
//
Query:       KHJ31873.1  [L=254]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1861.72
//
Query:       KHJ31874.1  [L=296]
Description: hypothetical protein EV44_g5477 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       638  (0.0355848); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2197.64
//
Query:       KHJ31875.1  [L=206]
Description: hypothetical protein EV44_g3477 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       935  (0.0521501); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1595.19
//
Query:       KHJ31876.1  [L=896]
Description: putative gtpase activating protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.7e-49  165.9   0.3    9.7e-49  165.9   0.3    2.9  3  RabGAP-TBC     Rab-GTPase-TBC domain
  ------ inclusion threshold ------
      0.031   14.9  23.4      0.057   14.1   4.7    3.9  3  YabA           Initiation control protein YabA
       0.52   10.6  12.2          6    7.2   0.4    4.1  3  HALZ           Homeobox associated leucine zipper
        7.9    5.8  18.1       0.19   11.1   8.1    2.9  3  DUF4527        Protein of unknown function (DUF4527)


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.6   0.00086       3.8       3      51 ..     392     437 ..     390     459 .. 0.53
   2 !  165.9   0.3   2.2e-52   9.7e-49      28     214 ..     486     671 ..     472     672 .. 0.89
   3 ?   -3.8   0.9       1.9   8.5e+03      17      58 ..     748     790 ..     738     814 .. 0.59

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.00086
  RabGAP-TBC   3 lRgevWklllgyep.evkrlkksekkqeksekeksklekseeskelsqIk 51 
                 +Rg vW++l+++++ e     +s +k+ +s  ++++++ ++es+e s + 
  KHJ31876.1 392 IRGVVWQILAQSKNeE----LESVYKKLVSRGTEEDQQLRNESNESSNVV 437
                 79********996632....223333333333333333333333333322 PP

  == domain 2  score: 165.9 bits;  conditional E-value: 2.2e-52
  RabGAP-TBC  28 qeksekeksklekseeskelsqIkkDvprtfpesesfknkqgqnqLeriLkaysiynpevgYcqGmndivaplllvsldeeeaFwcfvsLlekyklrdl 126
                  ++++++k + e +++ k ++ Ik+D+    + s++  ++ +q+ L+ + kay++y++evgY qGmn+++ pll ++++e eaF+++v+++++y+lrdl
  KHJ31876.1 486 VKAEKNKKAQDEIAAIIKLEKIIKRDLGARTSLSRFAASSGLQEGLFGVCKAYALYDEEVGYAQGMNFLAMPLL-FNMPEDEAFCLLVRMMNQYHLRDL 583
                 3444555555666667777999*****86666478888899*********************************.999********************* PP

  RabGAP-TBC 127 ytsslpglkrklkvleellkkkdpklykhlkeegldlelfaikwfltlflrefpletvlrlwD.lllegekfvllrvalailklleeel 214
                 +t+++pgl+ +l+++e+ll+++ p+ly hl + ++++ l+a++wfltlf++ fpl++vlr++D +l +g +  ++++++++++++ + l
  KHJ31876.1 584 FTQDMPGLHMRLYQFEKLLEDFEPALYCHLRRRQVTPHLYATQWFLTLFTYRFPLQLVLRIYDlILSQGLEA-IIKFGIVLMQKNASAL 671
                 ***************************************************************555599988.*********8887665 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 1.9
  RabGAP-TBC  17 evkrlkksekkqeksekeksklekseeskelsqIk.kDvprtf 58 
                 e+++l+k+ + + ++   ++k+ +++ +  +++I+  D + t 
  KHJ31876.1 748 EKNKLEKQRETEVENLRLSNKKLMHKVRRLEERIQdHDSEHTA 790
                 4455555555555555555555555555556666555555554 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.5     0.071   3.2e+02      21      64 ..     405     449 ..     398     470 .. 0.64
   2 ?   14.1   4.7   1.3e-05     0.057       3      56 ..     767     820 ..     765     832 .. 0.87
   3 ?    7.7   5.9    0.0012       5.5      11      74 ..     817     884 ..     814     889 .. 0.67

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.071
                 HHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXX CS
        YabA  21 leeleel.keelaelleenaeLeleneklrerleeeekkekekkk 64 
                 +eele++ k+ +++ +ee+++L+ e ++  + ++ ++++++++++
  KHJ31876.1 405 NEELESVyKKLVSRGTEEDQQLRNESNESSNVVQITKSTNNKEEA 449
                 456666524555677899999999988877777544444444433 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 1.3e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXX CS
        YabA   3 kkelfdkleeleeqleelleeleelkeelaelleenaeLeleneklrerleeee 56 
                 +k+l++k+++lee++++  +e ++l +el+++  +n+eL+ ene+l+ +++e +
  KHJ31876.1 767 NKKLMHKVRRLEERIQDHDSEHTALATELVHTKVRNQELRDENESLKVQVDEYR 820
                 688********************************************9985443 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0012
                 HHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHH...XXXXXXXXXXXXXXXXXXXXXX CS
        YabA  11 eeleeqleelleele.elkeelaelleenaeLeleneklrerl...eeeekkekekkkelsegkenLa 74 
                 +e  + +e+l +e+e +lk+e+ ++l++n+e++ en++l e++   e++  ++k k +e+++++e L+
  KHJ31876.1 817 DEYRDMMEKLPHEVEfRLKTEMDRILKRNQEVHDENTRLEEEMshmEKTLVETKMKYAEINSAHETLT 884
                 55555666666666647999999999999999999999999994444444455555555666666655 PP

>> HALZ  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   1.0     0.016        72      20      42 ..     759     781 ..     757     782 .. 0.90
   2 ?    7.2   0.4    0.0013         6      19      42 ..     800     823 ..     799     824 .. 0.85
   3 ?    5.1   0.3    0.0061        27      10      38 ..     834     862 ..     829     866 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.016
        HALZ  20 dydsLkkenekLkaelqeLkekl 42 
                 ++++L+  n+kL  ++++L e+ 
  KHJ31876.1 759 EVENLRLSNKKLMHKVRRLEERI 781
                 789****************9986 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0013
        HALZ  19 sdydsLkkenekLkaelqeLkekl 42 
                  +++ L++ene+Lk ++ e ++++
  KHJ31876.1 800 VRNQELRDENESLKVQVDEYRDMM 823
                 57899************9977776 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.0061
        HALZ  10 LKasYdaLksdydsLkkenekLkaelqeL 38 
                 LK   d    +++ +++en +L+ e+  +
  KHJ31876.1 834 LKTEMDRILKRNQEVHDENTRLEEEMSHM 862
                 89999999999***********9998765 PP

>> DUF4527  Protein of unknown function (DUF4527)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.2      0.14   6.1e+02     212     257 ..     130     176 ..     100     188 .. 0.78
   2 ?   11.1   8.1   4.3e-05      0.19       5      67 ..     755     817 ..     751     821 .. 0.90
   3 ?   -0.7   0.3      0.17   7.7e+02      39      79 ..     843     886 ..     813     892 .. 0.67

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.14
     DUF4527 212 avtvepglpaqslqeeggescpa.lqaddlpppsellsPariLAlhk 257
                  ++ e   p qs  e + ++ ++  ++ + p  s+l sP r   lh 
  KHJ31876.1 130 EIKSEENSPKQSSSEANSQPSSVtFPTFKYPVFSRLSSPPRTSSLHD 176
                 4556667788888887777777549999*************999995 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 4.3e-05
     DUF4527   5 eaeaseedlrlrvkqLhHqvltLqcqLRdqasahreLqasreeaerlreelqekleElqkkqh 67 
                 + e+  e+lrl +k+L H+v+ L  ++ d  s h +L + +  ++ + +el+++ e l+ + +
  KHJ31876.1 755 QRETEVENLRLSNKKLMHKVRRLEERIQDHDSEHTALATELVHTKVRNQELRDENESLKVQVD 817
                 5577789**********************************************9999987655 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.17
     DUF4527  39 reLqasreeaerlreel...qekleElqkkqhEanlAvtPLkAk 79 
                 ++ q+ ++e +rl ee+   ++ l E + k  E+n+A   L  k
  KHJ31876.1 843 KRNQEVHDENTRLEEEMshmEKTLVETKMKYAEINSAHETLTRK 886
                 34588889999999886222567899999999999987666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (896 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1633  (0.0910815); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.89u 0.29s 00:00:01.18 Elapsed: 00:00:00.47
# Mc/sec: 5781.51
//
Query:       KHJ31877.1  [L=352]
Description: putative f-actin-capping protein subunit alpha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.9e-94  314.7   0.0    5.9e-94  314.4   0.0    1.1  1  F-actin_cap_A  F-actin capping protein alpha subunit
     0.0014   19.2   0.0       0.27   11.9   0.0    2.4  2  CdiI_2         CdiI immunity protein
  ------ inclusion threshold ------
      0.023   13.9   0.0      0.044   13.0   0.0    1.4  1  DUF3822        Protein of unknown function (DUF3822)
      0.029   13.9   0.6        6.3    6.2   0.1    2.3  2  C5-epim_C      D-glucuronyl C5-epimerase C-terminus


Domain annotation for each model (and alignments):
>> F-actin_cap_A  F-actin capping protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  314.4   0.0   1.3e-97   5.9e-94       1     265 [.       8     266 ..       8     267 .. 0.98

  Alignments for each domain:
  == domain 1  score: 314.4 bits;  conditional E-value: 1.3e-97
                    HHHHHHT--TT-HHHHHHHHHCC-S-CCCCTTTHHHHHHHHHHHHT-EEEETTE..EEE--STTEEETTEEEEGGGTEEEEEETTTTEEEEEEE-- CS
  F-actin_cap_A   1 asslllqsPpgelneVlkDlrallsddskleealaealeeyneeqlvtvelpgssekvliseanklgeeryvdpkskksfkfdhlkqkasdvesve 96 
                    +s +++ +Ppgel++V++D++al+ d+ + +++l +a+++yneeq++tv+lpgss++v++s++n+lg++ry+d  s++ f+fdh++qkas+v+s+ 
     KHJ31877.1   8 ISAFVEGAPPGELANVITDIEALTIDNPSATSELGSAFRKYNEEQFATVKLPGSSNHVIVSSHNSLGDDRYYDVGSSSCFAFDHTTQKASNVQSYA 103
                    589********************************************************************************************* PP

                    S-GGGHHHHHHHHHHHHHHHHHH-TT-EEEEEEEEETTEEEEEEEEEEEEEEGGGTEEEEEEEEEEEESSEEEEEEEEEEEEEE-SSEEEEEEEEE CS
  F-actin_cap_A  97 leseleelrkalekalekYvkehYpsgvasvypkeeeeekelaiiivgnkynpsnFwnGrwrseytvdsssktleGkikvqvHYyEdGNVqlktsk 192
                    les++ +l k++ k+l+ Y++ehYp+ +++vyp  +++++ +ai iv+nky+p+n wnGrwrs y++++ss tl+G ikv+vHYyE+GNV+l t+k
     KHJ31877.1 104 LESTNLDLIKSFLKNLAPYIEEHYPDASFGVYP-IQDDTE-IAIAIVANKYSPKNLWNGRWRSLYKFSPSSLTLNGYIKVDVHYYENGNVRLLTTK 197
                    ********************************9.556777.******************************************************* PP

                    EEEEEEE--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTS-SS-TTSS---CCHHTXXXXXXXX CS
  F-actin_cap_A 193 evseslsvsseessakeivklikeaenkyqeeLnesyeeLsekafkaLRRqLPvtrqkidWdkvlnyklgqdl 265
                    ++s sls    +s+  ++v+ i++ e+kyqe+Lnes+ +Lse afk+LRRqLPvtrqk++Wdk+++y+lg+d+
     KHJ31877.1 198 PISRSLS----SSTGAAVVREISSLEKKYQEDLNESFYNLSEGAFKGLRRQLPVTRQKVEWDKIAGYRLGHDI 266
                    *******....99**********************************************************98 PP

>> CdiI_2  CdiI immunity protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   6.1e-05      0.27      24      70 ..       4      51 ..       1      58 [. 0.81
   2 ?    4.7   0.0      0.01        47      38      70 ..     206     237 ..     199     243 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 6.1e-05
      CdiI_2 24 ieeiledYvssespeevaelideieellassldee..leeaflaelgae 70
                + ++++++v+ ++p+e+a +i +ie+l   +++ +  l +af +++++e
  KHJ31877.1  4 HVAAISAFVEGAPPGELANVITDIEALTIDNPSATseLGSAF-RKYNEE 51
                6789***********************877776655899999.555443 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.01
      CdiI_2  38 eevaelideieellassldeeleeaflaelgae 70 
                  + a++++ei +l ++++++ l+e f++  ++ 
  KHJ31877.1 206 STGAAVVREISSLEKKYQED-LNESFYNLSEGA 237
                 567899************77.*****7766655 PP

>> DUF3822  Protein of unknown function (DUF3822)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   9.8e-06     0.044      95     142 ..      85     132 ..      76     136 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 9.8e-06
     DUF3822  95 sylklntkkeeneivlynelpsleavlvfgvdkelnnflsesfpearf 142
                 s++ + +++++  +v++++l+s ++ l+ ++ k+l  +++e++p+a f
  KHJ31877.1  85 SCFAFDHTTQKASNVQSYALESTNLDLIKSFLKNLAPYIEEHYPDASF 132
                 678899999***********************************9877 PP

>> C5-epim_C  D-glucuronyl C5-epimerase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0    0.0021       9.6     131     169 ..      77     114 ..      65     125 .. 0.82
   2 ?    6.2   0.1    0.0014       6.3      76      97 ..     159     179 ..     145     197 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0021
   C5-epim_C 131 pkydtgswslYdlrhvtlgkapnlarwdYhklhiellka 169
                 ++yd+gs s+++ +h+t  ka+n+++   +++ ++l+k+
  KHJ31877.1  77 RYYDVGSSSCFAFDHTTQ-KASNVQSYALESTNLDLIKS 114
                 68***********98886.89999977777777776664 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0014
   C5-epim_C  76 dkkiwyeeYptspksyvLNGfi 97 
                 + + w + Y  sp+s +LNG+i
  KHJ31877.1 159 N-GRWRSLYKFSPSSLTLNGYI 179
                 4.78999**************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2581.33
//
Query:       KHJ31878.1  [L=132]
Description: putative cytochrome b5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-25   88.3   0.1      4e-25   87.8   0.1    1.2  1  Cyt-b5    Cytochrome b5-like Heme/Steroid binding domain
  ------ inclusion threshold ------
      0.059   13.5   0.9       0.12   12.5   0.4    1.8  2  YqzH      YqzH-like protein


Domain annotation for each model (and alignments):
>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.8   0.1   4.4e-29     4e-25       3      73 ..       8      77 ..       7      78 .. 0.97

  Alignments for each domain:
  == domain 1  score: 87.8 bits;  conditional E-value: 4.4e-29
                HHHTTTECTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHHHHHHHGGEEEEE CS
      Cyt-b5  3 eelskhngkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekdaekllkkylvGkl 73
                +e+s+h  k+dl+++i++kVYDv+kfl++hpGge+++l+ aG+Dateaf++v hs++ a+k+l+++ +G+l
  KHJ31878.1  8 SEVSEHSAKEDLYMVIEDKVYDVTKFLDEHPGGEEVMLDVAGQDATEAFNDVGHSDE-ARKILTNLEIGEL 77
                79****************************************************999.8**********98 PP

>> YqzH  YqzH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.4   1.3e-05      0.12      43      60 ..      12      29 ..       3      32 .. 0.83
   2 ?   -2.3   0.0      0.53   4.7e+03      19      25 ..      61      67 ..      52      83 .. 0.47

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.3e-05
        YqzH 43 keqedeDlyeiveDivYd 60
                +  ++eDly ++eD vYd
  KHJ31878.1 12 EHSAKEDLYMVIEDKVYD 29
                56789************9 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.53
        YqzH 19 rdtelmp 25
                +++e  +
  KHJ31878.1 61 HSDEARK 67
                4433322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1019.13
//
Query:       KHJ31879.1  [L=201]
Description: hypothetical protein EV44_g2658 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-08   35.0   1.0    2.1e-08   34.3   1.0    1.4  1  zf-RING_2     Ring finger domain
    3.5e-05   24.0   1.3     0.0002   21.6   1.3    2.0  1  zf-rbx1       RING-H2 zinc finger domain
     0.0015   18.2   2.1     0.0027   17.4   2.1    1.5  1  zf-RING_11    RING-like zinc finger
     0.0032   17.3   1.3      0.007   16.2   1.3    1.6  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.041   13.9   2.9      0.081   13.0   2.9    1.5  1  zf-RING_UBOX  RING-type zinc-finger
      0.068   13.2   0.1       0.13   12.4   0.1    1.4  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
      0.078   12.8   0.1       0.14   12.1   0.1    1.4  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
       0.21   10.6   0.4         14    4.6   0.0    2.0  2  DUF4071       Domain of unknown function (DUF4071)


Domain annotation for each model (and alignments):
>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   1.0   9.6e-12   2.1e-08       2      44 .]     124     170 ..     123     170 .. 0.82

  Alignments for each domain:
  == domain 1  score: 34.3 bits;  conditional E-value: 9.6e-12
   zf-RING_2   2 eCpICleel.ssadsvl.llpCg..HvfhreClerwlrssstCPlCr 44 
                 eC IC ee+ ++++s++ +lpC   H f+ eC+  wlr + tCPl r
  KHJ31879.1 124 ECKICGEEFlDDEYSLVvQLPCHplHRFDLECVGPWLRLQGTCPLDR 170
                 9****999955556655266**77778*****************966 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   1.3   8.7e-08    0.0002      27      55 .]     140     170 ..     122     170 .. 0.71

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 8.7e-08
     zf-rbx1  27 vvlGeCg..HaFHlhCiskWlktrkvCPlcr 55 
                 vv+  C+  H F l+C+  Wl+ + +CPl+r
  KHJ31879.1 140 VVQLPCHplHRFDLECVGPWLRLQGTCPLDR 170
                 344466555********************97 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   2.1   1.2e-06    0.0027       1      29 []     124     156 ..     124     156 .. 0.88

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1.2e-06
  zf-RING_11   1 eCsICLeefkpgq.al.filpCs..HtFHfkCI 29 
                 eC IC eef +++ +l + lpC+  H F ++C+
  KHJ31879.1 124 ECKICGEEFLDDEySLvVQLPCHplHRFDLECV 156
                 9*********8887553788************7 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   1.3   3.1e-06     0.007       1      39 [.     124     168 ..     124     168 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 3.1e-06
  zf-C3HC4_2   1 kCpiCldmlkdpsvvt....pCg..HvfCqkCilrsLeekneCPl 39 
                 +C+iC +++ d  ++     pC   H+f  +C+ ++L+ +  CPl
  KHJ31879.1 124 ECKICGEEFLDDEYSLvvqlPCHplHRFDLECVGPWLRLQGTCPL 168
                 6****998876544444568**666*******************7 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   2.9   3.6e-05     0.081       1      39 []     125     167 ..     125     167 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.6e-05
  zf-RING_UBOX   1 CpIClelft.dP...lv.lpCG..HtFCreClwelskslegafkCP 39 
                   C IC e+f  d    +v lpC+  H F  eC+    ++l+ + +CP
    KHJ31879.1 125 CKICGEEFLdDEyslVVqLPCHplHRFDLECV---GPWLRLQGTCP 167
                   *****98885337766677*************...88899999998 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   5.6e-05      0.13      40      81 ..     132     173 ..     111     177 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.6e-05
                 TTTTTS-EEEBT.TS..-EEEHHHHHHHHHHHSTSSB-TTTSSB- CS
  zf-ANAPC11  40 fpGddcplvlGk.ck..hnfhlhcilkwletetskglcpmcrqtf 81 
                 f  d+ +lv+   c+  h f l c+  wl     +g cp++r+++
  KHJ31879.1 132 FLDDEYSLVVQLpCHplHRFDLECVGPWLRL---QGTCPLDRKNL 173
                 445888999987787669999********75...799*****986 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   6.2e-05      0.14       3      48 ..     123     174 ..     121     175 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 6.2e-05
                 SB-TTTSSS.....BS-EEETTEE..EEEE-HHHHHHHHHTT-B-TTT--B-- CS
  zf-C3HC4_3   3 eeCviCler.....prnvvllpCg..HlvlCeeCaekllkrkkkCpiCrrpie 48 
                 eeC+iC e+      + vv lpC   H  +  eC+  +l+ + +Cp+ r++ e
  KHJ31879.1 123 EECKICGEEflddeYSLVVQLPCHplHR-FDLECVGPWLRLQGTCPLDRKNLE 174
                 79*****96544324447888**666**.******************999865 PP

>> DUF4071  Domain of unknown function (DUF4071)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.1    0.0072        16      64     141 ..      29     108 ..       3     116 .. 0.72
   2 ?    4.6   0.0    0.0062        14     182     213 ..     168     200 ..     158     201 .] 0.85

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0072
     DUF4071  64 llqe.eleklltslverlkkllkeveies.kahlkekllndlrkareklkgeelakeLaslrkrlddpellsadivlnll 141
                  + +  + +++t+++++l+ l + v++++ +  l+++ll+ l  + ++ + + l++ ++s+ + +d+p   ++ + +n+l
  KHJ31879.1  29 FFSQlAQVESTTTFHNNLHALPTPVDMAAaERLLQDQLLHFLSMTSSTQQSDFLQSLIRSIDQDIDQPPTTTPGVSQNFL 108
                 22233355677888888888888888776245579999999999999999999*************99999988888887 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0062
     DUF4071 182 Lnrrnkegdrekalk.vilkalekkenpapdll 213
                 L+r+n e+dr k+l+ +i+++ e +e+ + d++
  KHJ31879.1 168 LDRKNLEEDRTKRLNdLIRNCHEVEEEDFDDMY 200
                 99**********996367888899999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       851  (0.047465); expected 358.6 (0.02)
Passed bias filter:                      631  (0.0351944); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1426.34
//
Query:       KHJ31880.1  [L=375]
Description: putative sphinganine hydroxylase sur2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      5e-24   85.1  13.2    1.3e-23   83.8  10.3    2.2  2  FA_hydroxylase  Fatty acid hydroxylase superfamily


Domain annotation for each model (and alignments):
>> FA_hydroxylase  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.015   2.7e+02       7      67 ..      45     108 ..      26     127 .. 0.63
   2 !   83.8  10.3   7.1e-28   1.3e-23       1     133 []     210     346 ..     210     346 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.015
  FA_hydroxylase   7 ledfveYwvHr.llHrvkl..lwrrlHkvHHsseaptalaalrahpleallla.llllllllllg 67 
                     l  ++ Yw+   ++H  +   +w    ++H  +e  +    +r  +++ +l++ ++ ++++++lg
      KHJ31880.1  45 LIPIAVYWIFSmFFHLIDTydIWP-QYRLHTPEEISSRNRVSRYEVARDVLIQqFIQAIVAIMLG 108
                     455677777777788755346666.4555543333333444444444444444466666666665 PP

  == domain 2  score: 83.8 bits;  conditional E-value: 7.1e-28
  FA_hydroxylase   1 lllallledfveYwvHrllHrvkllwrrlHkvHHsseaptalaalrahpleallla.llllllllllg.plsalllvlvlaallelliHsglhvs 93 
                     ++la+l+ d+++Y++Hr++H +k+l+ ++H+ HH+   p a+ al++hp+e ++l+ l + +++ l+g ++ + +l+++l ++ ++  H+g+ ++
      KHJ31880.1 210 FILAILVVDTWQYFLHRAMHLNKWLYTNFHSRHHRLYVPYAYGALYNHPVEGFVLDtLGAGIAYKLAGmTARQGMLFFTLSTIKTVDDHCGYALP 304
                     6899*****************99*********************************77777888888889999999***************5555 PP

  FA_hydroxylase  94 lgwllerllatpraHrlHHskne.egnfgv.llslwDrlfgT 133
                      ++l + +++ +++H++HH++   ++nf++ +l++wD ++gT
      KHJ31880.1 305 WDPLQHITKNNASYHDIHHQNWGiKTNFSQpFLTFWDGFLGT 346
                     55555888*************99788***9679*******99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       499  (0.027832); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 2586.45
//
Query:       KHJ31881.1  [L=426]
Description: hypothetical protein EV44_g6238 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       720  (0.0401584); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.21s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 3301.34
//
Query:       KHJ31882.1  [L=349]
Description: putative eukaryotic initiation factor 4f subunit p130 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-16   60.5   0.0    3.2e-16   59.3   0.0    1.7  1  eIF_4G1   Eukaryotic translation initiation factor 4G1


Domain annotation for each model (and alignments):
>> eIF_4G1  Eukaryotic translation initiation factor 4G1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.3   0.0   1.8e-20   3.2e-16       7      69 ..     149     215 ..     144     216 .. 0.94

  Alignments for each domain:
  == domain 1  score: 59.3 bits;  conditional E-value: 1.8e-20
     eIF_4G1   7 eeeptisaflesLksArpiediysvkYPegiesPdpalnkeakk....yrYdpdFLLQFkdvvkekp 69 
                 + ++ +sa+l+ L+sAr + ++    YP++i+sP+p ln++ k     ++Yd++FLLQFk+ + ekp
  KHJ31882.1 149 TSNLRPSAALKCLESARWLTSLDPSIYPPSIKSPNPCLNQDDKGsprsFKYDKEFLLQFKNYFVEKP 215
                 56789**********************************888879********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       769  (0.0428914); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2558.41
//
Query:       KHJ31883.1  [L=323]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.021   14.8   5.1      0.022   14.7   2.1    2.3  2  ADK_lid        Adenylate kinase, active site lid
       0.21   12.0   0.2       0.21   12.0   0.2    1.7  2  GP68           Phage protein Gp68
        3.4    7.6   9.8       0.26   11.2   1.6    2.8  2  zf-CCHC_6      Zinc knuckle


Domain annotation for each model (and alignments):
>> ADK_lid  Adenylate kinase, active site lid
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.1      0.15     9e+02      18      29 ..     187     198 ..     173     199 .. 0.78
   2 ?   14.7   2.1   3.7e-06     0.022       4      30 ..     211     236 ..     210     240 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.15
                 -SSTTB-TTT-- CS
     ADK_lid  18 PkveglCDkCGe 29 
                  k   +C  C++
  KHJ31883.1 187 QKPTEFCERCNG 198
                 567889999997 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 3.7e-06
                 -TTT--EEETTTB--SSTTB-TTT--. CS
     ADK_lid   4 CpkCGrsYhvvfnpPkveglCDkCGep 30 
                 C +CG +Yh +     +  +C +CG+p
  KHJ31883.1 211 CANCGSTYHTA-DIGMAATKCRNCGGP 236
                 *********44.334599*******97 PP

>> GP68  Phage protein Gp68
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       1.8   1.1e+04       6      21 ..     199     214 ..     197     223 .. 0.75
   2 ?   12.0   0.2   3.4e-05      0.21      18      65 ..     241     288 ..     226     294 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.8
        GP68   6 nhpslrspiaphetag 21 
                  hps     ap  + +
  KHJ31883.1 199 HHPSKNCSRAPSCANC 214
                 5999999999877666 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 3.4e-05
        GP68  18 etagvlrmrraGykGaailkllklrGtrlvnqmqraldaetaaaraGr 65 
                    ++ r  r+G   ++ lk  +  G r  n +qra  ae++aa   r
  KHJ31883.1 241 SRRCLARPTRSGSPTKEQLKTYRQMGEREYNAVQRAKVAEEKAASIER 288
                 34699999*********************************9997766 PP

>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.3     0.072   4.3e+02       4      14 ..     211     221 ..     209     222 .. 0.85
   2 ?   11.2   1.6   4.3e-05      0.26       3      19 ..     229     244 ..     227     260 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.072
   zf-CCHC_6   4 CknCGAFGHta 14 
                 C nCG   Hta
  KHJ31883.1 211 CANCGSTYHTA 221
                 *****988876 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 4.3e-05
   zf-CCHC_6   3 KCknCGAFGHtarSkrC 19 
                 KC+nCG   H+a S+rC
  KHJ31883.1 229 KCRNCGG-PHRADSRRC 244
                 9*****9.5******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       890  (0.0496402); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2287.41
//
Query:       KHJ31884.1  [L=821]
Description: putative atp-dependent rna helicase drs1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.1e-45  154.1   0.7    5.2e-45  153.4   0.0    1.8  2  DEAD          DEAD/DEAH box helicase
    2.6e-28   98.6   0.1    1.4e-27   96.2   0.1    2.3  2  Helicase_C    Helicase conserved C-terminal domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.4   0.0   5.8e-49   5.2e-45       1     175 [.     322     491 ..     322     492 .. 0.96
   2 ?   -3.0   0.1      0.61   5.4e+03     130     155 ..     679     706 ..     671     714 .. 0.53

  Alignments for each domain:
  == domain 1  score: 153.4 bits;  conditional E-value: 5.8e-49
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS.TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet.kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngv 98 
                 t+iQ+++ip +l g+d+++ a TGsGKT+af++p+l++++ + k+ ++ ++ i+ PtreLa q+++ ++k+ +y+d++ +l +gg + + q ++l+ ++
  KHJ31884.1 322 TPIQSKTIPVALLGKDIVGGAVTGSGKTAAFIVPILERLMYRpKKVPTSRVAILMPTRELAIQCHSVATKLASYTDIKFCLAVGGLSLKVQEAELRLRP 420
                 89************************************988899***************************************************99** PP

                 SEEEEEHHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHHH CS
                 xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  99 divvgtpgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvkk 175
                 d+++gtpgr++d++ ++ +++++ +++lVlDEadr+l+ gf d++n+i++++       +++rq++++SAT+++++++
  KHJ31884.1 421 DVIIGTPGRFIDHMrNSASFTVDTLEILVLDEADRMLEAGFADELNEIITTI-------PKSRQTMLFSATMTSSIDN 491
                 ************99777889********************************.......67899********988776 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.61
                 HHHHHHT..TTHHHHHHHHHHSHHHCTT CS
                 xxxxxxx..xxxxxxxxxxxxxxxxxxx RF
        DEAD 130 adrlldq..gfsdfinrilnqlpqitcd 155
                 ad+ +d+  g +d+in+il++ ++ ++ 
  KHJ31884.1 679 ADKWQDKvtGLEDEINAILKEEKEEKQL 706
                 4455554555566666665555443333 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       0.6   5.4e+03      12      56 ..     365     413 ..     355     418 .. 0.68
   2 !   96.2   0.1   1.5e-31   1.4e-27      11     111 .]     538     638 ..     529     638 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.6
                 HTTTTSEEEEEESSHH...HHHH.HHHHHHHTTSTEEEESTTSTHHHHH CS
  Helicase_C  12 leeeggkilifvntid...rlek.vklllekkgikvavlhgelpqnere 56 
                 +++ ++++ i ++t++   ++++ ++ l +  +ik++   g l+ + +e
  KHJ31884.1 365 KKVPTSRVAILMPTRElaiQCHSvATKLASYTDIKFCLAVGGLSLKVQE 413
                 5677888999999999766554464555455589999998888877666 PP

  == domain 2  score: 96.2 bits;  conditional E-value: 1.5e-31
                 HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTTSSS CS
  Helicase_C  11 kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqriGRtgR 109
                  ++   ++++if ++++++++++++   +++k+a lhg+++q++r+ ++e+f++g++ +L+atd a+rG+di+++++Vinf++p++++ y +r+GRt+R
  KHJ31884.1 538 CKNIYSQRVIIFFRQKQEAHRARVIFGLFELKAAELHGSMSQEQRINSIEAFRDGKVSFLLATDLASRGLDIKGIETVINFEAPQSLEIYLHRVGRTAR 636
                 35567899*********998888888899********************************************************************** PP

                 TT CS
  Helicase_C 110 ag 111
                 ag
  KHJ31884.1 637 AG 638
                 97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (821 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1738  (0.0969379); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.77u 0.31s 00:00:01.08 Elapsed: 00:00:00.46
# Mc/sec: 5375.53
//
Query:       KHJ31885.1  [L=117]
Description: hypothetical protein EV44_g5918 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       281  (0.0156729); expected 358.6 (0.02)
Passed bias filter:                      216  (0.0120475); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 864.06
//
Query:       KHJ31886.1  [L=326]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       827  (0.0461264); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2434.57
//
Query:       KHJ31887.1  [L=330]
Description: putative epoxide hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-20   73.5   0.0    3.9e-16   59.5   0.1    2.1  2  Abhydrolase_1  alpha/beta hydrolase fold
    1.3e-10   42.2   0.0    1.9e-10   41.8   0.0    1.2  1  Abhydrolase_6  Alpha/beta hydrolase family
    2.3e-06   27.1   0.0    8.6e-06   25.2   0.0    1.8  2  Hydrolase_4    Serine aminopeptidase, S33
     0.0059   15.4   0.0     0.0088   14.8   0.0    1.2  1  Ndr            Ndr family
  ------ inclusion threshold ------
      0.018   14.9   0.0      0.043   13.6   0.0    1.7  2  Abhydrolase_5  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.5   0.1   1.1e-19   3.9e-16       1     113 [.      39     149 ..      39     166 .. 0.86
   2 !   12.2   0.0   2.9e-05      0.11     182     256 ..     231     310 ..     212     311 .. 0.84

  Alignments for each domain:
  == domain 1  score: 59.5 bits;  conditional E-value: 1.1e-19
                    SEEEEE-STTTCGGGGTTGHHHHHHHHTTSEEEEEEETTSTTSSSTTTGB.CHHSHH.HHHHHHHHHHHHCTTSSEEEEEETHHHHHHHHHHHHHG CS
  Abhydrolase_1   1 pvlvilhGlpgssdvwaerglapaLakdgfdvillDlrGvgySspapacinddygta.svaddldrildalgddkltlvGhSmGGmialayaaeyp 95 
                    +++ ++hG+p+ +  w+    +p L   g+++++++++G+g ++++ +   +++ t+   +ddl  ++ +lg+ k+++ Gh++GG+++  +a++yp
     KHJ31887.1  39 NTIFLIHGWPDLAFGWRY--QIPCLLSLGYRIVAPNMMGYGGTDAPES---PEFYTCkRACDDLSILVSHLGLNKIVIGGHDWGGAVVYRFALRYP 129
                    5789*******8888***..****************************...6776662588999999***************************** PP

                    GGEEEEEEESE..CSSCCHH CS
  Abhydrolase_1  96 erVkalvllga..idpaasl 113
                    +  +++  +++  i+p  ++
     KHJ31887.1 130 SLTSKFFVICTsfIPPTKEH 149
                    ***********664444433 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 2.9e-05
                    HHHHHHHHHHHHHCCHHHHHHHHHCTHHHHS......EEEEEEETTCSSSCHHHHHHHHHCHTSEEEEEEETCSSSHHHHS CS
  Abhydrolase_1 182 atgalksieqwpttdsaklllrlrelknvla......ptlvisgtsDplvppkaledlaqllpkkrlvvisdagHlafleg 256
                     ++++     w+ td+ ++ ++ ++ +n++       p+l+i+ ++D + +p+ +e ++ ++++ ++++++++ H+a  e+
     KHJ31887.1 231 MRNGIRGSLNWYRTDMLNYEDEKEMANNMKPgplfnmPALYIACSNDSVLSPSLSEGMDIWFKN-LKRAEVPSAHWAMVEK 310
                    4555555566777777777777777888888999999***************************.************9876 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   0.0   5.2e-14   1.9e-10       1     212 [.      41     309 ..      41     316 .. 0.50

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 5.2e-14
                    EEEE--GC.....G.CHHHHHHHHCCTCEEEEE--TTSTS-GGCS....--HHHCHHH.HHHHCCTT..TTSEEEEEETCHHHHHHH.HHHCC... CS
  Abhydrolase_6   1 vlllHGagssassW.lvapLaallaagvhvlapDlpGhGrsdppp....ldledladl.aalldelaagggpvvlvGHSlGGalala.aapla... 86 
                    ++l+HG +  a +W +  ++  ll+ g++++ap   G+G++d p     ++  ++ d+ + l+ +l+   +++v+ GH++GGa++ + a++++   
     KHJ31887.1  41 IFLIHGWPDLAFGWrY--QIPCLLSLGYRIVAPNMMGYGGTDAPEspefYTCKRACDDlSILVSHLG--LNKIVIGGHDWGGAVVYRfALRYPslt 132
                    689***6665666877..999999999999********73322222233555557666599*****5..9*************9999555555866 PP

                    .....EE.EEES-................----TTTS----TTHHHHHHTT-CCCCHCCH...................................S CS
  Abhydrolase_6  87 ...lvvg.vlldp..............pptalpagllaaalelllallallrllawlsre...................................p 129
                       +v++  ++ p              +                l+l+++++  ++ + e                                   +
     KHJ31887.1 133 skfFVICtSFIPPtkehlsltnlpnfkY---------------QLQLGGPEVE-QFIVDEekmkqflsgiyggitptgkyifspshgvhldrlklI 212
                    6655555455555333333333322220...............2222222222.111111111221111111111111111111122222222333 PP

                    -HSCCCCHHH.....C.......CCCHCHCCCGHHHHCCHHC.HTT...CCHHTT-TTGCEEECTT-CHHHHCHHCCCH...STTEEETCE...SS CS
  Abhydrolase_6 130 lprlfladed.....a.......daawrarlarlaallaglg.llp...aaawadlpvpllvlggeDplvprllerlla...qagarlpvvlpgaG 206
                     p+++l+d++     +       + + +++ ++++ + +  + + +   + +++ +p+++ + +++D ++ + l + +    ++ +r +  +p + 
     KHJ31887.1 213 GPPSLLSDTElnfyvKsymrngiRGSLNWYRTDMLNYEDEKEmA-NnmkPGPLFNMPALY-IACSNDSVLSPSLSEGMDiwfKNLKRAE--VP-SA 303
                    33355554443332202223334444444444444444422221.123366999999998.7688888777777766666553333331..22.55 PP

                    S-HHHH CS
  Abhydrolase_6 207 Hlphle 212
                    H+ + e
     KHJ31887.1 304 HWAMVE 309
                    666665 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   2.4e-09   8.6e-06       5     114 ..      39     145 ..      35     184 .. 0.82
   2 ?   -0.6   0.0      0.18   6.5e+02     185     210 ..     260     285 ..     229     300 .. 0.78

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 2.4e-09
  Hydrolase_4   5 avvvlvHGlaehsgryaelaeaLaaqGfavyalDhrGhGrse.gkrghvpsfddyvdDlaafvekvkeehpelplfllGhSmGGliallyllrypdkv 101
                   +++l+HG  + +      +  L   G+ ++a +  G+G ++ ++  ++   ++ +dDl+ +v+++       ++++ Gh +GG+++ +++lryp+  
   KHJ31887.1  39 NTIFLIHGWPDLAFGWRYQIPCLLSLGYRIVAPNMMGYGGTDaPESPEFYTCKRACDDLSILVSHLG----LNKIVIGGHDWGGAVVYRFALRYPSLT 132
                  6899999999999999999999********************888889***************9998....557**********************66 PP

  Hydrolase_4 102 aglilsaPalkik 114
                  +++ ++++ + ++
   KHJ31887.1 133 SKFFVICTSFIPP 145
                  6666666655444 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.18
  Hydrolase_4 185 eraakitlPllllhGeaDkvvdpeas 210
                  +  + +++P l +  ++D v +p+ s
   KHJ31887.1 260 KPGPLFNMPALYIACSNDSVLSPSLS 285
                  44455679************999877 PP

>> Ndr  Ndr family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   2.5e-06    0.0088      71     124 ..      79     132 ..      64     147 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.5e-06
                 ----TT-----HHHHHTTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGE CS
         Ndr  71 aslpedyqfpslddladqllavldhfklksviglGvgaGAyilarfalkhperv 124
                  + pe  +f + +  +d+l+ ++ h+ l++++  G   G  ++ rfal++p++ 
  KHJ31887.1  79 TDAPESPEFYTCKRACDDLSILVSHLGLNKIVIGGHDWGGAVVYRFALRYPSLT 132
                 56677778999999************************************9876 PP

>> Abhydrolase_5  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.2e-05     0.043      48      87 ..      98     137 ..      92     183 .. 0.81
   2 ?   -2.9   0.0       1.4   5.2e+03     100     116 ..     266     282 ..     263     286 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.2e-05
  Abhydrolase_5  48 eiikeapklekfvvgGhslGGvvasrfaaeeekiegvvfl 87 
                    +i+ ++ +l+k v+gGh  GG+v+ rfa +  ++ + +f+
     KHJ31887.1  98 SILVSHLGLNKIVIGGHDWGGAVVYRFALRYPSLTSKFFV 137
                    566778899*******************998777666664 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.4
  Abhydrolase_5 100 skkvlsivgteDgvlnv 116
                    ++++l i  ++D+vl+ 
     KHJ31887.1 266 NMPALYIACSNDSVLSP 282
                    789999*******9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.28s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 2277.60
//
Query:       KHJ31888.1  [L=452]
Description: putative eukaryotic peptide chain release factor subunit 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-47  160.2   0.1    5.6e-47  159.4   0.1    1.4  1  eRF1_2          eRF1 domain 2
    6.8e-40  136.1   0.5    1.4e-39  135.1   0.5    1.5  1  eRF1_3          eRF1 domain 3
      3e-21   75.8   0.0    5.2e-21   75.0   0.0    1.4  1  eRF1_1          eRF1 domain 1
    2.5e-11   44.0   0.0    4.6e-11   43.1   0.0    1.4  1  baeRF_family10  Bacterial archaeo-eukaryotic release factor f
    7.4e-09   36.0   0.0    1.2e-08   35.3   0.0    1.4  1  acVLRF1         Actinobacteria/chloroflexi VLRF1 release fact


Domain annotation for each model (and alignments):
>> eRF1_2  eRF1 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.4   0.1   1.6e-50   5.6e-47       1     133 []     146     278 ..     146     278 .. 0.99

  Alignments for each domain:
  == domain 1  score: 159.4 bits;  conditional E-value: 1.6e-50
                 EEEEEEEETTEEEEEEEESSCEEEEEEEE------BSTTBSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHTTTESEEEEEESSTHHHHHHHHHHHH CS
      eRF1_2   1 kvglivldegeAtigllkgsrtevlkkievsvPkKhkrGgqsarrfeRlreekleeflkkvaeaankafllvdkdklkgiilagpgfvkeefldkdlld 99 
                 k+g+i++d+++A +g+l+g++++v++k++v++PkKh+rGgqsa rf+Rlreek++++++kvae a ++f+++dk +++g+ilag++++k+++ ++dl+d
  KHJ31888.1 146 KFGFIIMDGNGALFGTLSGNTRDVVHKFSVDLPKKHGRGGQSALRFARLREEKRHNYVRKVAELAVQNFISNDKVNVAGLILAGSADFKNDLNQSDLFD 244
                 69************************************************************************************************* PP

                 HHHHTCCEEEEE-S-TSCHHHHHHHHCCHHHHCC CS
      eRF1_2 100 aelkkkviklvdvsyggesglnevlekaaevlkd 133
                 ++l++kvik+vdvsygge+g+n+++e +ae+l++
  KHJ31888.1 245 NRLQSKVIKVVDVSYGGENGFNQAIELSAETLSN 278
                 ***************************9999975 PP

>> eRF1_3  eRF1 domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.1   0.5   3.8e-43   1.4e-39       1     113 []     281     418 ..     281     418 .. 0.98

  Alignments for each domain:
  == domain 1  score: 135.1 bits;  conditional E-value: 3.8e-43
                 HHHHHHHHHHHHHHHHCTCSSEEESHHHHHHHHHTT-EEEEEEEHCHHTSSSHHHHHS......................-HHH-HHHHHH...HHHHH CS
      eRF1_3   1 liqekklleefleelakdtgkavYGveevlkalemgAvetLLvseelersrdtlkekv......................ketgeelelve...lieel 74 
                 +iqekkl+ +++ee+++d+g+++YGve++lkale+gAvetL+v+e+le++r++lk+                        k+tg+e+e+v    ++e++
  KHJ31888.1 281 FIQEKKLIGKYFEEISQDSGRVCYGVEDTLKALELGAVETLIVFENLEITRWQLKDVSgvthilhttkqsetsnreqfmdKDTGQEMEVVAtdsFLEWI 379
                 69***************************************************998889*******************************99******* PP

                 HHHHHHTT-EEEEE-TTSHHHHHHHHHTTTEEEEESS-- CS
      eRF1_3  75 venveesgakveiisseseeGeqlvkafgGiaaiLRykv 113
                 +++++e+ga++e++s++s+eG+q+vk+fgGi++iLRykv
  KHJ31888.1 380 ADKYKEFGANLEFVSDRSSEGNQFVKGFGGIGGILRYKV 418
                 *************************************97 PP

>> eRF1_1  eRF1 domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.0   0.0   1.4e-24   5.2e-21       1     128 [.      19     140 ..      19     141 .. 0.97

  Alignments for each domain:
  == domain 1  score: 75.0 bits;  conditional E-value: 1.4e-24
                 HEEEEE..CTBTTSCCEEEEEE-SCHHHHHHHHHCHTTHEEEEEEEECHHH.......--CEEEEEEEEEEEEEEECTT...SSEEEEEEEEEEGGGG- CS
      eRF1_1   1 mkllkr..dlekdgsgsvtLipeddedlwhlynliapgdsvrastvrkvqresstgsreservklkLtikvekvdfdkd...agvlrisGkvieenehv 94 
                 +kl+kr  +++++g+++++Li++++++++ + +++a++++++++++++v+r         ++v++++t+++++++++++   +g+++++G++ + ++  
  KHJ31888.1  19 KKLIKRleAARGNGTSMISLIIPPKDQVSRAAKMLAEEYGTASNIKSRVNR---------QSVLSAITSTQQRLKLYNKvppNGLVVYCGEILTTEG-- 106
                 799**998999**************************************99.........9******************9*****************.. PP

                 -TTSEEEEEE-TTSEEEEEECE.ESHHHHHHHHHH CS
      eRF1_1  95 klgafhtldlelkrpftiikee.wdsfalerLkea 128
                  +++++++d+e+++p++++ +  +++f++e+L e+
  KHJ31888.1 107 -KERKVNIDFEPFKPINTSLYLcDNKFHTEALAEL 140
                 .9********************9*********996 PP

>> baeRF_family10  Bacterial archaeo-eukaryotic release factor family 10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.1   0.0   1.3e-14   4.6e-11       3     122 ..     134     257 ..     133     273 .. 0.90

  Alignments for each domain:
  == domain 1  score: 43.1 bits;  conditional E-value: 1.3e-14
  baeRF_family10   3 lapLlealdeyerygvvlvdreraRlfevylgeleeveevegevpgrtktggwksqdrfqrreeeqaerhlkevAellaklleerg...verlvl 94 
                     ++ L+e+ld+++++g +++d ++a + + ++   + v++++ + p+++ +gg+ s  rf+r +ee+++ ++++vAel+++ +  ++   v  l+l
      KHJ31888.1 134 TEALAELLDADQKFGFIIMDGNGALFGTLSGNTRDVVHKFSVDLPKKHGRGGQ-SALRFARLREEKRHNYVRKVAELAVQNFISNDkvnVAGLIL 227
                     678**************************************************.************************998877777899***** PP

  baeRF_family10  95 gGdeeetaal..ldrlpkalrarvvgtlpl 122
                     +G ++ ++ l   d++ ++l+++v+  +++
      KHJ31888.1 228 AGSADFKNDLnqSDLFDNRLQSKVIKVVDV 257
                     **9876666622689*********988655 PP

>> acVLRF1  Actinobacteria/chloroflexi VLRF1 release factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   3.4e-12   1.2e-08       7      92 ..     151     240 ..     145     271 .. 0.83

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 3.4e-12
     acVLRF1   7 lvrrggfavgvveggelvaskvgtrdvqgrtaaGGwSqqRfaRrrenqadalleavaeaaarllaeesae....vvlgGdrslvaevled 92 
                 +    g  +g+++g+++  +++++ d  +++ +GG+S  RfaR re++  + +++vae a + + ++++     ++l+G     +++ ++
  KHJ31888.1 151 IMDGNGALFGTLSGNTRDVVHKFSVDLPKKHGRGGQSALRFARLREEKRHNYVRKVAELAVQNFISNDKVnvagLILAGSADFKNDLNQS 240
                 44445558999***********************************************99999966666667889999998888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       547  (0.0305092); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3333.95
//
Query:       KHJ31889.1  [L=358]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       378  (0.0210832); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2691.30
//
Query:       KHJ31890.1  [L=609]
Description: putative mfs multidrug transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-28  100.1  30.6    6.4e-28   97.7  26.4    2.1  2  MFS_1     Major Facilitator Superfamily
    0.00035   20.0   7.6    0.00065   19.1   3.0    2.4  2  MFS_4     Uncharacterised MFS-type transporter YbfB
  ------ inclusion threshold ------
      0.034   14.2   0.2      0.091   12.8   0.2    1.7  1  Vma12     Endoplasmic reticulum-based factor for assembly of 


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.7  26.4   1.1e-31   6.4e-28       1     344 [.      81     458 ..      81     467 .. 0.77
   2 !    8.3   6.5   0.00016      0.95      69     188 ..     401     520 ..     399     562 .. 0.68

  Alignments for each domain:
  == domain 1  score: 97.7 bits;  conditional E-value: 1.1e-31
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlga 99 
                 ++l+++ + ++ s+++ a+p  ++e++++s++++   + ++ +++a++  +++++s+ +Gr+++l ++l+l  ++ l  ++as++ ++l++r+l Gl  
  KHJ31890.1  81 VFLVQVSMNFNTSLYSNAIP-GITEEFNVSAQTARCGAMIFLVFYAFGCELWAPWSEELGRKPILQASLFLVNIWQLPVALASNFNTVLIGRALGGLS- 177
                 6889999999**********.******************************************************44444667777***********9. PP

       MFS_1 100 galfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee.....kgtgp 193
                 +a+ ++ + +iad++  e++  a++++  ++  G+ilgp++gg+    l Wr++ +i  i+++++  l +l +pe++++   ++ ++++     + +gp
  KHJ31890.1 178 SAGGSVTLGMIADLWETENQQYAVAFVVFSSVGGSILGPIVGGFSEKFLDWRWSIWIQLIFGIFVQALHFLMVPETRTTIMMDRIAKKKrkigeNIWGP 276
                 8999***************************************999*******************8887788888888888888888888899988899 PP

       MFS_1 194 aplvp................awkallkdpvlwillialllfffgfsglltllplylqevlgls..glllaglllallalvgailallagrlsdr.... 270
                 ++l+p                ++k++l+ p    +l+ +ll +f  +++++++ ++    + ++  + +++gl++  ++++ + + + +  +++r    
  KHJ31890.1 277 TELIPyhqrfsfseimitwlrPFKMFLTEPI---VLVLSLLSGFSDALIFMFIQSFSLVYRQWGfdS-VSLGLAFVPIGIGYLLAWISFIPIIRRnike 371
                 999999999999999999999*********3...555555555688889999999855556666643.6666444444444444433344444446677 PP

       MFS_1 271 ............lgrrrrlllallllllaalglallavtssavllllvlvl....iGf.glgfvfpsllalasdlappeeagtasglfnta 344
                              +r + ll + ++l ++++g+a++++   ++l+++++++    +G+  ++++++++ ++++ +    ++++a+g ++ a
  KHJ31890.1 372 rkdkpnderaqfESRLWWLLYTAPCLPIGLIGFAWTSTG--PPLHWVFSMIfsciVGVaNYAVYMATIDYMVTAYG--PYSASATGGNGWA 458
                 777777777553333445555555555666666666666..66666655551233666566666666666666666..5666666655555 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00016
       MFS_1  69 lllfalglllllfasslw.lllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagf.slGailgpllggllasslgWravfyilaivsllaf 165
                 l++fa +++ +   + +w + +++ ++ G++  a++ a + +++  + +   ++a+g  + +   l+ +l+ ++ ++++ ++g   + y+ +i++ +++
  KHJ31890.1 401 LIGFAWTSTGP---PLHWvFSMIFSCIVGVANYAVYMATIDYMVTAYGP-YSASATGGNGWARdFLAGVLTIPATPFFT-NIGTNPIAYASTILAGISL 494
                 33333332222...3378899***********66666666666666777.899999999997615555999*******9.8886666666666666665 PP

       MFS_1 166 v...lfllllpeepperkrkspkeee 188
                 +    +++ ++  p  r+r++ ++++
  KHJ31890.1 495 LlvmAVYIIYWKGPELRHRSPFAQQL 520
                 52226677779999999988888775 PP

>> MFS_4  Uncharacterised MFS-type transporter YbfB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   3.0   1.1e-07   0.00065       4     170 ..      87     251 ..      84     273 .. 0.80
   2 ?    2.7   0.1      0.01        61      75     132 ..     301     356 ..     284     371 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1.1e-07
       MFS_4   4 alGiGRFsytpiLPallaegqlslsqagllaaaNylGYLvGallaafalsagaeRlr.llagllatvllllamaltesfaaflliRflaGvasAvvlvf 101
                  + +   +y   +P + +e ++s+  a   a + ++ Y  G  l    +s++  R   l+a+l++ ++  l +al+++f ++l+ R l G++sA   v 
  KHJ31890.1  87 SMNFNTSLYSNAIPGITEEFNVSAQTARCGAMIFLVFYAFGCELW-APWSEELGRKPiLQASLFLVNIWQLPVALASNFNTVLIGRALGGLSSAGGSVT 184
                 555666689999****************999999999*9998655.58888888887799*************************************** PP

       MFS_4 102 gsslvlahaaaarrervgallfaGvGlGiavsgllvllllqlglsassl.Wlalavlsavllllvalllp 170
                  ++++    ++ ++ +v  ++f+ vG  i+  g +v    +++l++ ++ W+ l ++ + +  l +l++p
  KHJ31890.1 185 LGMIADLWETENQQYAVAFVVFSSVGGSIL--GPIVGGFSEKFLDWRWSiWIQL-IFGIFVQALHFLMVP 251
                 *****7777999**************7776..6678888888888887646543.444444444455555 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.01
       MFS_4  75 maltesfaaflliRflaGvasAvvlvfgsslvlahaaaarrervgallfaGvGlGiav 132
                 m lte   ++l++ +l+G + A++++f+ s +l   +    +  ++l f  +G+G ++
  KHJ31890.1 301 MFLTEP--IVLVLSLLSGFSDALIFMFIQSFSLVYRQWGFDSVSLGLAFVPIGIGYLL 356
                 555544..5678899****************999988888888899999999999776 PP

>> Vma12  Endoplasmic reticulum-based factor for assembly of V-ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   1.5e-05     0.091     105     135 ..     410     440 ..     386     443 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.5e-05
       Vma12 105 slpvrvllslvvallVgvAEvvvyakylrkv 135
                   p   ++s++++ +VgvA  +vy++ ++++
  KHJ31890.1 410 GPPLHWVFSMIFSCIVGVANYAVYMATIDYM 440
                 5678889*******************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (609 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.24s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4259.13
//
Query:       KHJ31891.1  [L=215]
Description: putative duf858 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.2e-80  268.4   0.0    4.7e-80  268.2   0.0    1.0  1  Methyltransf_PK  AdoMet dependent proline di-methyltransferas
    5.1e-06   27.1   0.0    8.1e-06   26.4   0.0    1.3  1  Methyltransf_11  Methyltransferase domain
    6.2e-06   26.1   0.0    8.6e-06   25.7   0.0    1.1  1  Methyltransf_23  Methyltransferase domain
    9.4e-06   26.3   0.0    1.8e-05   25.4   0.0    1.5  1  Methyltransf_25  Methyltransferase domain
  ------ inclusion threshold ------
      0.036   13.9   0.1       0.19   11.5   0.1    2.0  1  Methyltransf_31  Methyltransferase domain
      0.045   13.2   0.0       0.95    8.8   0.0    2.1  2  Spermine_synth   Spermine/spermidine synthase domain


Domain annotation for each model (and alignments):
>> Methyltransf_PK  AdoMet dependent proline di-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  268.2   0.0   1.6e-83   4.7e-80       5     217 ..       7     211 ..       3     212 .. 0.96

  Alignments for each domain:
  == domain 1  score: 268.2 bits;  conditional E-value: 1.6e-83
  Methyltransf_PK   5 vyekaiaYWesveadvdGvLGGygavskiDvkgsrkflkklkkeslpgkrevkvaldcGaGiGrvtknlLlkllskvDlvepvekflekakeel 98 
                       ++ a +YW++++ad  G+LGGyg +s+iD+ gsr+f++kl++    +  + ++a+dcGaGiGr+tknlLl+l++ vD+vep++kf ++++   
       KHJ31891.1   7 NQQVARKYWQGIKADNGGMLGGYGYISNIDIRGSRSFIQKLNIT--DNRAKLSRAVDCGAGIGRITKNLLLELATTVDIVEPIAKFSNALQ--- 95 
                      567799************************************99..579999***************************************... PP

  Methyltransf_PK  99 aeekkkvgkvyvvglqeftPeegrYdliWiqWcvghLtDedlvaflkrckkalkpnGlivvkenvakeekdelDkeDssvtrseaklkklfkka 192
                        ++  +g+++  gl++++P e +Y+liW+qWc+g L D +l+a++k+c++ lkp+Gli+vken+++++ d++D+ Dssvtr+++k+ ++f ++
       KHJ31891.1  96 --GTLGIGDIFKNGLEDWSPTE-SYNLIWNQWCLGYLNDTQLIAYFKQCARFLKPDGLIIVKENISSSQLDIFDEIDSSVTRTDEKFLHIFDQS 186
                      ..55678*************86.7********************************************************************** PP

  Methyltransf_PK 193 gLklvaeelqkglPkelypvkmyaL 217
                      gLk+ ++e qkg+PkelypvkmyaL
       KHJ31891.1 187 GLKVKKAEIQKGFPKELYPVKMYAL 211
                      ************************9 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   2.7e-09   8.1e-06       1      96 []      60     153 ..      60     153 .. 0.86

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 2.7e-09
                      EEET-TTSHHHHHHHHTTSEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCCTSS-TT-EEEEEEES-CCC-..CCHHHHHHHHHHHEEEEE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrgarvvgvDlskemlklakekaseeglkvefvvadaeklpfednsfDlvvssevlhhv..edpekalkeiaRvLkpgG 92 
                      +d+G+G Gr+++ l    +  ++vD+ +   k +++ + + g+  ++ +  +e+   + +s+ l++ +++l ++   ++ +++k++aR Lkp+G
       KHJ31891.1  60 VDCGAGIGRITKNLL--LELATTVDIVEPIAKFSNALQGTLGI-GDIFKNGLEDW-SPTESYNLIWNQWCLGYLndTQLIAYFKQCARFLKPDG 149
                      599************..5568**********999999999986.45666666664.4668**************76678899************ PP

                      EEEE CS
  Methyltransf_11  93 llvi 96 
                      l+++
       KHJ31891.1 150 LIIV 153
                      *986 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   2.9e-09   8.6e-06      16     139 ..      49     174 ..      36     193 .. 0.72

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 2.9e-09
  Methyltransf_23  16 llpklraggrvLdiGcGtGillevlrengf.svtgvDlspeaveiae.....kakkaqkdqfdeqeaaepqgkfdlIvlrevlehvpd..ppel 101
                      + +++ + +r +d G+G G+ ++ l  + + +v+ v++  + ++ ++     ++++ +       e++ p ++++lI +  +l+ + d  + ++
       KHJ31891.1  49 ITDNRAKLSRAVDCGAGIGRITKNLLLELAtTVDIVEPIAKFSNALQgtlgiGDIFKNGL-----EDWSPTESYNLIWNQWCLGYLNDtqLIAY 137
                      446678888**********999999777655999****7654444445554433333333.....5699******************98899** PP

  Methyltransf_23 102 lrqiatllkpgGylllseplaslkedrllldwlylvpa 139
                      ++q a+ lkp+G++++ e  +s +++  ++++   v++
       KHJ31891.1 138 FKQCARFLKPDGLIIVKENISS-SQLDIFDEIDSSVTR 174
                      ****************996544.444444444444333 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   5.9e-09   1.8e-05       2      97 .]      60     149 ..      59     149 .. 0.80

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 5.9e-09
                      EEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHHEEE CS
  Methyltransf_25   2 LdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeeglnvefvqgdaedlpfedgsfDlvvssgalhhlsdedlekalkeiarvLkp 95 
                      +d+G+G Gr+t++l+ +l     t vDi e   +  ++     g   ++ +  +ed++ + +s++l++ + +l +l+d +l +++k++ar Lkp
       KHJ31891.1  60 VDCGAGIGRITKNLLLEL----ATTVDIVEPIAKFSNALQGTLG-IGDIFKNGLEDWS-PTESYNLIWNQWCLGYLNDTQLIAYFKQCARFLKP 147
                      69************9887....5666666665555544443334.5567777789998.667*******999********************** PP

                      EE CS
  Methyltransf_25  96 gG 97 
                      +G
       KHJ31891.1 148 DG 149
                      *9 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   6.3e-05      0.19       6     117 ..      58     161 ..      54     198 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 6.3e-05
  Methyltransf_31   6 rvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldnveFeqgdieelekl.led.ekfDlilsnevl..naladpdkile 95 
                      r +D+G+G G++t++l  el      + +Di e   +++++           + +gdi++     +++ e+++li  +  l     + + ++++
       KHJ31891.1  58 RAVDCGAGIGRITKNLLLEL-----ATTVDIVEPIAKFSNALQGT-------LGIGDIFKNGLEdWSPtESYNLIWNQWCLgyLNDTQLIAYFK 139
                      6789***********99877.....67999999999999997444.......556899994422244479****99988885555566677899 PP

  Methyltransf_31  96 eiervlkpggilliedprllae 117
                      +  r lkp+g +++ +    ++
       KHJ31891.1 140 QCARFLKPDGLIIVKENISSSQ 161
                      ************9987553444 PP

>> Spermine_synth  Spermine/spermidine synthase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.036   1.1e+02      55     106 ..      37      89 ..      34      97 .. 0.66
   2 ?    8.8   0.0   0.00032      0.95     114     151 ..     136     173 ..     129     181 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.036
                     HHHHHHHSHHHHTTCGGCTTEEE.EESTCHHHHCTCSS....-EEEEEEECCSTTCS CS
  Spermine_synth  55 idfskkflpslaisafndarvkl.vlgdgfkflkayek....kfdvvivdsldpvgp 106
                     i  s++f+++l+i    d+r kl    d+++ + ++ k    +++  +vd ++p+ +
      KHJ31891.1  37 IRGSRSFIQKLNIT---DNRAKLsRAVDCGAGIGRITKnlllELA-TTVDIVEPIAK 89 
                     6789********99...8888887666766655555554533222.34455556655 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00032
                     HHHHHHHHTEEEEEEEEEEEEETTTCHHHHHHHHHHHH CS
  Spermine_synth 114 effdllkkvlkedGviilqaekpelekelvinvdksgk 151
                      +f+++++ lk+dG+ii+ ++    +++++ ++d s+ 
      KHJ31891.1 136 AYFKQCARFLKPDGLIIVKENISSSQLDIFDEIDSSVT 173
                     79******************999999999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       273  (0.0152267); expected 358.6 (0.02)
Passed bias filter:                      257  (0.0143343); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1656.79
//
Query:       KHJ31892.1  [L=735]
Description: putative topoisomerase 1-associated factor 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-83  278.0   2.0      1e-82  277.5   0.2    2.0  2  TIMELESS    Timeless protein
    1.7e-19   70.4   0.2    1.7e-19   70.4   0.2    2.4  2  TIMELESS_C  Timeless protein C terminal region
  ------ inclusion threshold ------
      0.023   14.5   0.1       0.24   11.3   0.0    2.7  3  AbiJ_NTD5   AbiJ N-terminal domain 5
          1    9.0  11.9        6.1    6.5   7.6    2.3  2  Slu7        Pre-mRNA splicing Prp18-interacting factor
          3    7.8   5.1        5.5    7.0   5.1    1.3  1  DUF2076     Uncharacterized protein conserved in bacteria (DU


Domain annotation for each model (and alignments):
>> TIMELESS  Timeless protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  277.5   0.2   2.9e-86     1e-82       2     276 .]      37     305 ..      36     305 .. 0.92
   2 ?   -0.8   0.1      0.21   7.4e+02     157     225 ..     489     528 ..     470     583 .. 0.48

  Alignments for each domain:
  == domain 1  score: 277.5 bits;  conditional E-value: 2.9e-86
    TIMELESS   2 YklgddclecLkdLkrwlrl.DdddnrrdvaralaeakilqndLipiLiqweekkkk......lalaclrLlvaLTwPlelleeeeeteeqtahytqlk 93 
                 Y lgdd+l+cL+dLkrwl+l D++ nr dvar+lae +++  d+++iL+ w e +++       al+cl+Llv+LTwP++   +e +t+++++h+++l+
  KHJ31892.1  37 YILGDDALACLRDLKRWLKLyDEKVNRFDVARCLAELNVVGGDILQILAAWPEYESEdrlkfkAALSCLELLVPLTWPIKKDPNE-MTQNHHRHIPYLQ 134
                 99**************************************************98333455666******************7777.************* PP

    TIMELESS  94 kalleyKaailseekgkvlkalvrlllevlakdreerterdegiieliLtLiRNilaiedpqekeksasskkeddilhskliealeesgvldllltlas 192
                  a+l+yK++il+ +++++l++ vr++l+++a +++er++rdegii+l L++iRNi++ie+p  k+ ++++ ++ +i++s li++++ +++++l+l ++s
  KHJ31892.1 135 IAQLGYKRSILNFDGARILHTTVRCALPSIAEPKNERSSRDEGIIKLLLYFIRNIAMIEPP--KSINFDE-ENLEISRSVLIDTFHYQDIFHLILSVSS 230
                 *************************************************************..4444444.4469************************ PP

    TIMELESS 193 sigkefeqeqfnllllEiiylllkgqdpeeLakesekesrstkeasrasdelskllekekakkkasikknastRHsrFggtlsv 276
                  +g+efe +  ++++l+ii++++kg+++e+L+      sr++++++ + del++l++ke+a+  +++ +na+tRH+rFg++ ++
  KHJ31892.1 231 MMGEEFEVQ--DVIVLDIIFHIVKGINVEDLF------SREKNREDLKIDELKRLRKKEAAMLSTYQ-NNAPTRHNRFGTMAWI 305
                 ***988887..*********************......44455566789*************99999.689**********986 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.21
    TIMELESS 157 keksasskkeddilhskliealeesgvldllltlassigkefeqeqfnllllEiiylllkgqdpeeLa..........k 225
                 +++s+++                                          +   i++ ++ + ++++L+           
  KHJ31892.1 489 NQSSIEE---------------------------------------DREIASNILSRIFYEESIHDLIasvtrtykdqG 528
                 3333333.......................................334444444444444444444444443333330 PP

>> TIMELESS_C  Timeless protein C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   3.5     0.054   1.9e+02     217     411 ..     557     603 ..     536     624 .. 0.50
   2 !   70.4   0.2   4.8e-23   1.7e-19       2      77 ..     651     731 ..     650     733 .. 0.97

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.054
                 XXXXXXXXXX..XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHCHHHHHHTTSHHHHHHHHHHHHHHHHHH CS
  TIMELESS_C 217 glvaekrelleakkkrkkrkpkkdveeeged.dfaedpeeeeekPeskpeeeekrqsarqeeesvtikaeelrkqlkseklrsalewlqscLiraaeDe 314
                 + +++++ ++  k+k k++k ++dv    ed df  d e ++                                                         
  KHJ31892.1 557 QVRSKRKSRR-KKEKDKADKLSQDVRSGDEDnDFSGDDENDD--------------------------------------------------------- 597
                 3333333333.2333333333334433333333433333333......................................................... PP

                 TST.TS---EEE---SHHHHHHHT-HHHHHHHHHHT-B---TTT-SSEEE-TTS-HHHHHHHHHT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  TIMELESS_C 315 EedveadqavpLvplteeqeeameneqfqrvlkaLGlrpPlsgeegfWRiPikLssadLrrrakiLaeeeeeredelkddedgeeadeseeeedlle 411
                                                                                                            +  ++ 
  KHJ31892.1 598 -------------------------------------------------------------------------------------------DDSIAV 603
                 ...........................................................................................333333 PP

  == domain 2  score: 70.4 bits;  conditional E-value: 4.8e-23
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  TIMELESS_C   2 LhRiaydlemaalLFqlsllrlFqrilsepkavas.....keleelvkqlvrkllkkaevnpklfvELLFsKntsearele 77 
                 ++R+a++ +m ++LF+++++ l ++++++p + +      ke+eelv+q+ ++ l+k++ +p l vE+LFsK++s+a+ l+
  KHJ31892.1 651 FYRVAFKNDMSVMLFRVDIIVLLNKMIKGPDGLDTdsavlKEWEELVRQIFKRCLRKIQERPELVVEMLFSKTNSTANFLN 731
                 9********************************9999*****************************************997 PP

>> AbiJ_NTD5  AbiJ N-terminal domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       1.2   4.3e+03      49      67 ..       9      27 ..       8      32 .. 0.87
   2 ?   11.3   0.0   6.6e-05      0.24       7      38 ..     450     481 ..     447     492 .. 0.89
   3 ?   -2.3   0.0       1.1     4e+03      55      85 ..     524     554 ..     523     562 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.2
   AbiJ_NTD5 49 sfgDdDYegnvldvlekll 67
                +f D+D +++v ++++++ 
  KHJ31892.1  9 DFVDPDVRAHVSSIVTAIG 27
                699**********999985 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 6.6e-05
   AbiJ_NTD5   7 krllalkkiiveeFdesdWkeLglltdkldli 38 
                 + +++l++++  +F++++W eLg+ +++  +i
  KHJ31892.1 450 EMFITLNRFMNSSFESKNWLELGAALKCFSQI 481
                 56799******************999998776 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 1.1
   AbiJ_NTD5  55 YegnvldvlekllsedpenLkeleeyleeks 85 
                 Y++  +  le+  +  ++ L +le+y +e+ 
  KHJ31892.1 524 YKDQGFGYLESVTETAQNYLRVLENYSKENT 554
                 5566666778888888888888888877765 PP

>> Slu7  Pre-mRNA splicing Prp18-interacting factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1    0.0082        29       4      49 ..     391     436 ..     388     450 .. 0.90
   2 ?    6.5   7.6    0.0017       6.1      15      87 ..     539     609 ..     537     623 .. 0.61

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0082
        Slu7   4 dakRDrwngYdpeeykkvveeyekieeerkklkeeelkkkaaeeke 49 
                 d   Dr +++ p+++  ++  + k+++ rk ++ e+++k+ +e++e
  KHJ31892.1 391 DREEDRVQDFHPTQFFYLISWFLKADRSRKARHIENKDKQVNETEE 436
                 6678****************************99999988877654 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0017
        Slu7  15 peeykkvveeyekieeerkklkeeelkkkaaeekekakkkeeeaedsdsdedeeedkddededkyaeeadmag 87 
                 +++y +v+e+y k +   + + ++++++k  +ek+ka+k ++++++ d+d+d + d++++d+d++a ++  ++
  KHJ31892.1 539 AQNYLRVLENYSKENTDLQVRSKRKSRRK--KEKDKADKLSQDVRSGDEDNDFSGDDENDDDDSIAVNVSRER 609
                 689********987776666666666533..344445555555666666665555555556666665555544 PP

>> DUF2076  Uncharacterized protein conserved in bacteria (DUF2076)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   5.1    0.0015       5.5     194     258 ..     538     599 ..     507     601 .. 0.67

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0015
     DUF2076 194 qsaeeeeiinnyyssssladdaedadnasadsfadsdsssdnnadaasdddsdddssddgggDDd 258
                 ++++   +++ny    + + d++ + + ++++++++d+ ++ ++d  s d+++d s+dd+++DDd
  KHJ31892.1 538 TAQNYLRVLENYS---KENTDLQVRSKRKSRRKKEKDKADKLSQDVRSGDEDNDFSGDDENDDDD 599
                 3344445555555...6666777777777777777788888888888888888888866666664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (735 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1084  (0.0604607); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.26s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 5191.98
//
Query:       KHJ31893.1  [L=353]
Description: putative mfs transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-32  112.1  13.6    3.2e-32  111.8  13.6    1.0  1  MFS_1     Major Facilitator Superfamily
     0.0082   16.3   0.4     0.0082   16.3   0.4    2.6  3  DHHC      DHHC palmitoyltransferase


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.8  13.6   3.6e-36   3.2e-32       1     265 [.      57     341 ..      57     351 .. 0.84

  Alignments for each domain:
  == domain 1  score: 111.8 bits;  conditional E-value: 3.6e-36
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrr.vlllglllfalglllllfasslwlllvlrvlqGlg 98 
                 l+l++++++l+r+++++a    l edl++ +se+++++++ ++g++++++p     +r+G    +l +++l+++l +++++ ++++  ll++r++ G++
  KHJ31893.1  57 LVLIYIMNYLDRGNIAAAKIAGLPEDLNLKGSEYQWAVSVLFFGYILMQVPSNLYLNRIGKPGiYLPACMLAWGLVSTCMAASHNFRDLLICRLFLGFA 155
                 5799***************99***************************************7777************888884366559*********** PP

       MFS_1  99 agalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg.......Wravfyilaivsllafvlfllllpeepperkrkspkeee.. 188
                 ++a+fp+++ +++ w+++ e ++ ++++ +g+ ++ ++  l+++ +++          Wr++f++ +i +++++ l ++ lp+ p++    s++e+e  
  KHJ31893.1 156 EAAYFPGCLFYLSCWYTRAELTFRTAIFFSGSIISGAVSGLVSSGICAKMEglkglraWRWLFILEGITTMFVAFLSFFILPDLPHTTTFLSTEEREla 254
                 ***********************************************77777***********************999999999****99999999999 PP

       MFS_1 189 .............kgtgpaplvpawkallkdpvlwillialllfff.gfsglltllplylqevlglsglllaglllallalvgailallag 265
                              + ++++++++  +all+ + + +++++ll+ ++ + s+++t++p++ +++l+++  +++ ll   ++++++i   + +
  KHJ31893.1 255 lwrlekdtceqtvSEDKHQSFLT--GALLAAKDIKVYVLMLLIHCIaVASSVVTYFPSI-VKTLNYN-RVTTFLLTVPPFALAVITTYFNA 341
                 99999999998887777777777..55555555532333333332204666*******7.*******.34444444444444444444444 PP

>> DHHC  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.3       0.2   1.8e+03      95     123 ..     146     174 ..      90     185 .. 0.58
   2 ?   -1.2   2.2      0.23   2.1e+03      93      94 ..     204     215 ..     139     251 .. 0.48
   3 !   16.3   0.4   9.1e-07    0.0082      24      98 ..     262     335 ..     260     349 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.2
        DHHC  95 lsilllvlsllfllllgllllfhlylilr 123
                 l + l++  + ++++ g+l++ ++++++ 
  KHJ31893.1 146 LICRLFLGFAEAAYFPGCLFYLSCWYTRA 174
                 23333333344445555555555555555 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.23
        DHHC  93 k..........l 94 
                 k           
  KHJ31893.1 204 KmeglkglrawR 215
                 033333443221 PP

  == domain 3  score: 16.3 bits;  conditional E-value: 9.1e-07
        DHHC  24 vCnrcvlrfDHhCpwlnnciGerNykyFllfllylllllilalvlllialvklveeekkseflavtllkkllsil 98 
                 +C++ v +  H    ++    ++  k+++l+ll+++++++  +v+++ ++vk++++++ ++fl +  + +l  ++
  KHJ31893.1 262 TCEQTVSEDKHQSFLTGALLAAKDIKVYVLMLLIHCIAVASSVVTYFPSIVKTLNYNRVTTFLLTVPPFALA-VI 335
                 79*****************************************************99999988776665322.22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2625.72
//
Query:       KHJ31894.1  [L=368]
Description: putative tpr domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-05   24.4   1.5        8.4    6.8   0.2    5.0  5  TPR_12           Tetratricopeptide repeat
      4e-05   23.4   7.3       0.74   10.1   0.1    5.3  5  TPR_2            Tetratricopeptide repeat
    0.00025   21.0  10.2        6.9    7.2   0.1    5.6  6  TPR_8            Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.022   14.8   0.3          2    8.6   0.0    3.7  4  TPR_7            Tetratricopeptide repeat
      0.025   14.8   1.6        1.1    9.5   0.1    3.0  3  ANAPC3           Anaphase-promoting complex, cyclosome, subun
      0.038   14.5   0.8       0.17   12.4   0.0    2.5  3  TPR_19           Tetratricopeptide repeat
      0.039   13.9   0.1      0.077   13.0   0.1    1.5  1  Nitrate_red_del  Nitrate reductase delta subunit
       0.08   12.8   4.0         18    5.4   0.0    4.4  5  TPR_10           Tetratricopeptide repeat
       0.18   11.7   9.3          4    7.4   0.1    4.2  5  TPR_1            Tetratricopeptide repeat
       0.22   12.4   1.2         13    6.9   0.0    3.8  4  TPR_14           Tetratricopeptide repeat
        5.1    7.6   9.5         24    5.4   0.3    2.7  2  PP28             Casein kinase substrate phosphoprotein PP28


Domain annotation for each model (and alignments):
>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.11   1.8e+02      64      77 .]      71      84 ..      66      89 .. 0.71
   2 ?    4.1   0.0     0.035        58       5      28 ..      97     120 ..      93     123 .. 0.81
   3 ?    4.6   0.0     0.024        40       8      58 ..     213     259 ..     208     264 .. 0.84
   4 !    6.8   0.2    0.0052       8.4      39      71 ..     302     333 ..     277     339 .. 0.77
   5 !    6.7   0.0    0.0053       8.6       4      36 ..     308     340 ..     303     355 .. 0.65

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.11
      TPR_12 64 Alelleealaiaek 77
                A ++++ea++iae+
  KHJ31894.1 71 AMKYYKEAIRIAEE 84
                66777777777764 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.035
      TPR_12   5 alnnlaavlrrlgrydeAlellek 28 
                 + +++a +l + ++yd+A+e le+
  KHJ31894.1  97 IKVQIAILLEKCEKYDKAIEVLEA 120
                 55679999999999***9999886 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.024
      TPR_12   8 nlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyral 58 
                  la+++ +  r+  +  l+ +al++    +G  h  ta+ ++nL+  + ++
  KHJ31894.1 213 TLAHLHEEKDRHYLSAPLFLQALNLS--PPGSCH--TAILMNNLSSSLAQQ 259
                 499999*******************9..355556..999999999887665 PP

  == domain 4  score: 6.8 bits;  conditional E-value: 0.0052
      TPR_12  39 pdhpltattlrnLgrlyralgryeeAlelleea 71 
                 +d  + a + +nLg l + +g++  A + +eea
  KHJ31894.1 302 CDT-CCAVATHNLGKLAEIRGDLISAKKKYEEA 333
                 444.67889999999999999999999999998 PP

  == domain 5  score: 6.7 bits;  conditional E-value: 0.0053
      TPR_12   4 talnnlaavlrrlgrydeAlellekaleiarrl 36 
                  a +nl+ +   +g++  A + +e+a e+ r++
  KHJ31894.1 308 VATHNLGKLAEIRGDLISAKKKYEEAGELSRKI 340
                 355567777777777777777777776666666 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.023        38      20      32 ..      71      83 ..      67      85 .. 0.84
   2 ?    5.8   0.0     0.011        17       7      25 ..     101     119 ..      98     122 .. 0.88
   3 ?    2.3   0.0      0.14   2.2e+02       6      32 ..     213     239 ..     211     240 .. 0.89
   4 ?   -1.3   0.1       1.9   3.2e+03      20      31 ..     279     290 ..     277     292 .. 0.82
   5 !   10.1   0.1   0.00046      0.74       5      31 ..     311     337 ..     307     340 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.023
       TPR_2 20 AleafekAleldP 32
                A +++++A+++++
  KHJ31894.1 71 AMKYYKEAIRIAE 83
                99*******9986 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.011
       TPR_2   7 lGlayyklgdyeeAleafe 25 
                 ++ +++k  +y++A+e +e
  KHJ31894.1 101 IAILLEKCEKYDKAIEVLE 119
                 789999**********988 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.14
       TPR_2   6 nlGlayyklgdyeeAleafekAleldP 32 
                  l+ ++++++++   + +f +Al l P
  KHJ31894.1 213 TLAHLHEEKDRHYLSAPLFLQALNLSP 239
                 58899999999999999********99 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 1.9
       TPR_2  20 AleafekAleld 31 
                 A+++ e A++l+
  KHJ31894.1 279 AIAWAENAIALA 290
                 899999999987 PP

  == domain 5  score: 10.1 bits;  conditional E-value: 0.00046
       TPR_2   5 ynlGlayyklgdyeeAleafekAleld 31 
                 +nlG++++ +gd+  A++ +e+A el 
  KHJ31894.1 311 HNLGKLAEIRGDLISAKKKYEEAGELS 337
                 79*********************8886 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.1    0.0043       6.9      19      32 ..      70      83 ..      67      85 .. 0.87
   2 !    6.5   0.1    0.0067        11       6      25 ..     100     119 ..      97     121 .. 0.89
   3 ?   -2.1   0.0       3.8   6.2e+03       5      13 ..     154     162 ..     151     163 .. 0.77
   4 ?    4.6   0.0     0.029        47       7      32 ..     214     239 ..     212     240 .. 0.95
   5 ?   -1.5   0.1       2.5   4.1e+03      19      32 ..     278     291 ..     276     292 .. 0.79
   6 ?    4.5   0.1     0.029        48       5      32 ..     311     338 ..     309     340 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0043
                HHHHHHHHHHHHHH CS
       TPR_8 19 eAkeyyekaleldp 32
                +A++yy++a+++++
  KHJ31894.1 70 MAMKYYKEAIRIAE 83
                79*********987 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0067
                 HHHHHHHHTT-HHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyye 25 
                 +++ +++k ++y++A+e++e
  KHJ31894.1 100 QIAILLEKCEKYDKAIEVLE 119
                 788999***********998 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 3.8
                 HHHHHHHHH CS
       TPR_8   5 ynlgsiylk 13 
                 ++lg++y++
  KHJ31894.1 154 VKLGDLYSN 162
                 579999986 PP

  == domain 4  score: 4.6 bits;  conditional E-value: 0.029
                 HHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   7 lgsiylklgdyeeAkeyyekaleldp 32 
                 l+++++++ ++  +   + +al l+p
  KHJ31894.1 214 LAHLHEEKDRHYLSAPLFLQALNLSP 239
                 89**********************98 PP

  == domain 5  score: -1.5 bits;  conditional E-value: 2.5
                 HHHHHHHHHHHHHH CS
       TPR_8  19 eAkeyyekaleldp 32 
                 +A+++ e a+ l+ 
  KHJ31894.1 278 NAIAWAENAIALAN 291
                 79999999998875 PP

  == domain 6  score: 4.5 bits;  conditional E-value: 0.029
                 HHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyyekaleldp 32 
                 +nlg++ +  gd+ +Ak+ ye+a el++
  KHJ31894.1 311 HNLGKLAEIRGDLISAKKKYEEAGELSR 338
                 699999************9999977766 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.38   6.2e+02      18      32 ..      71      85 ..      67      89 .. 0.71
   2 ?    8.6   0.0    0.0013         2       4      24 ..     100     120 ..      99     125 .. 0.91
   3 ?   -1.5   0.0       2.2   3.5e+03       5      30 ..     214     237 ..     212     241 .. 0.69
   4 ?   -2.1   0.0       3.4   5.5e+03       3      27 ..     311     333 ..     309     339 .. 0.61

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.38
       TPR_7 18 AielyeqsLaltkdp 32
                A ++y+++++++++ 
  KHJ31894.1 71 AMKYYKEAIRIAEEL 85
                778888866666655 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0013
       TPR_7   4 nLarlysrlGdyeeAielyeq 24 
                 ++a l +++ +y++Aie++e+
  KHJ31894.1 100 QIAILLEKCEKYDKAIEVLEA 120
                 689999************997 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 2.2
       TPR_7   5 LarlysrlGdyeeAielyeqsLaltk 30 
                 La+l+++  ++   + l+ q  al  
  KHJ31894.1 214 LAHLHEEKDRHYLSAPLFLQ--ALNL 237
                 77888887777677788888..5554 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 3.4
       TPR_7   3 lnLarlysrlGdyeeAielyeqsLa 27 
                 +nL+ l + +Gd   A + ye+  a
  KHJ31894.1 311 HNLGKLAEIRGDLISAKKKYEE--A 333
                 5666666556666666666666..5 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1   0.00068       1.1      37      81 ..      73     120 ..      70     121 .. 0.78
   2 ?    3.2   0.0     0.062     1e+02      40      74 ..     284     318 ..     275     321 .. 0.86
   3 ?   -3.5   0.0       8.1   1.3e+04      37      46 ..     328     337 ..     326     345 .. 0.61

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00068
                 T-HHHHHHHHHCTSHHHC-H...HHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  37 gqykrAyellrkaklnsksl...gcrylfAqcllkLkkyeeAiaaLek 81 
                 + yk+A++++++++ +  s    g+ + +A  l k +ky++Ai +Le+
  KHJ31894.1  73 KYYKEAIRIAEELGVDRFSDemmGIKVQIAILLEKCEKYDKAIEVLEA 120
                 569999999999844432222459999999999*************97 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.062
                 HHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT-HHH CS
      ANAPC3  40 krAyellrkaklnskslgcrylfAqcllkLkkyee 74 
                 + A+ l++k +  ++s++c  ++A +   L+k+ e
  KHJ31894.1 284 ENAIALANKIQPPERSEECDTCCAVATHNLGKLAE 318
                 56888899999999999999999999999999876 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 8.1
                 T-HHHHHHHH CS
      ANAPC3  37 gqykrAyell 46 
                 ++y++A el 
  KHJ31894.1 328 KKYEEAGELS 337
                 4555555554 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00011      0.17       3      55 ..      71     125 ..      69     132 .. 0.82
   2 ?   -2.4   0.0       4.2   6.9e+03       4      20 ..     320     336 ..     319     339 .. 0.75
   3 ?   -2.0   0.1       3.3   5.4e+03      42      54 ..     347     359 ..     345     366 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00011
      TPR_19   3 aegdyaeAlalleqa.lqe.dpknaearllLAeallalgqldeAealLdalpeed 55 
                 a++ y eA+++ e++  +  + ++  ++ + A++l +   +d+A+++L+a+  ++
  KHJ31894.1  71 AMKYYKEAIRIAEELgVDRfSDEMMGIKVQIAILLEKCEKYDKAIEVLEAIRTDN 125
                 566688899999996334446669**************************98765 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 4.2
      TPR_19   4 egdyaeAlalleqalqe 20 
                 +gd+ +A + +e+a + 
  KHJ31894.1 320 RGDLISAKKKYEEAGEL 336
                 58888889999988765 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 3.3
      TPR_19  42 deAealLdalpee 54 
                 ++A+ +L+++ +e
  KHJ31894.1 347 KKAKSALKRIEQE 359
                 6888888888665 PP

>> Nitrate_red_del  Nitrate reductase delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   4.7e-05     0.077      48     106 ..     160     223 ..     158     257 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 4.7e-05
  Nitrate_red_del  48 yesvYlsekkgllfgestlevrefyrqaglevaeefnep......pDHlaveLeflahLaereae 106
                      y   Y+ e++ l  ++ t +v++ +++++ +++e+++e       +D++++ +e lahL e+   
       KHJ31894.1 160 YSNNYVLEQE-LAEERLTWAVEQTLKELQRREREGVKEDegpwfdDDQIGTQFETLAHLHEEKDR 223
                      5556666666.66667779*******************9999******************98765 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.011        18      21      35 ..      71      85 ..      66      92 .. 0.84
   2 ?   -1.6   0.0       1.8   2.9e+03       9      26 ..     102     119 ..     100     123 .. 0.68
   3 ?    4.5   0.0     0.021        34       1      19 [.     245     263 ..     245     264 .. 0.87
   4 ?   -3.2   0.1       5.6   9.1e+03      21      31 ..     279     289 ..     278     292 .. 0.78
   5 ?    0.3   0.0      0.44   7.2e+02      11      34 ..     309     332 ..     307     339 .. 0.53

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.011
      TPR_10 21 Aealleealairrrl 35
                A+++++ea++i ++l
  KHJ31894.1 71 AMKYYKEAIRIAEEL 85
                99*********9998 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.8
      TPR_10   9 analrqrgrydeAealle 26 
                 a++l +  +yd+A + le
  KHJ31894.1 102 AILLEKCEKYDKAIEVLE 119
                 677777778888887744 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.021
      TPR_10   1 tAsslnNLanalrqrgryd 19 
                 tA  +nNL+  l q+ r +
  KHJ31894.1 245 TAILMNNLSSSLAQQIRPA 263
                 6788***********9975 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 5.6
      TPR_10  21 Aealleealai 31 
                 A a++e a+a+
  KHJ31894.1 279 AIAWAENAIAL 289
                 78899999987 PP

  == domain 5  score: 0.3 bits;  conditional E-value: 0.44
      TPR_10  11 alrqrgrydeAealleealairrr 34 
                 a +++g+++e + +l+ a   +++
  KHJ31894.1 309 ATHNLGKLAEIRGDLISAKKKYEE 332
                 445555555555555555444444 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0    0.0038       6.2      19      32 ..      70      83 ..      67      85 .. 0.85
   2 ?    7.4   0.1    0.0024         4       7      22 ..     101     116 ..      99     120 .. 0.88
   3 ?   -2.4   0.0       3.1   5.1e+03       7      32 ..     214     239 ..     214     239 .. 0.77
   4 ?   -3.5   0.1       7.1   1.2e+04      20      30 ..     279     289 ..     277     290 .. 0.75
   5 ?    0.8   0.1      0.31   5.1e+02       6      27 ..     312     333 ..     307     336 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0038
                HHHHHHHHHHHHST CS
       TPR_1 19 eAleyyekALelnP 32
                 A +yy++A+++ +
  KHJ31894.1 70 MAMKYYKEAIRIAE 83
                79********9976 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0024
                 HHHHHHHTT-HHHHHH CS
       TPR_1   7 lGnayfklgkydeAle 22 
                 ++ ++ k +kyd+A+e
  KHJ31894.1 101 IAILLEKCEKYDKAIE 116
                 7899***********9 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 3.1
                 HHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   7 lGnayfklgkydeAleyyekALelnP 32 
                 l++++ ++ ++      + +AL l P
  KHJ31894.1 214 LAHLHEEKDRHYLSAPLFLQALNLSP 239
                 67777788888888888999998877 PP

  == domain 4  score: -3.5 bits;  conditional E-value: 7.1
                 HHHHHHHHHHH CS
       TPR_1  20 AleyyekALel 30 
                 A++  e A+ l
  KHJ31894.1 279 AIAWAENAIAL 289
                 88888888877 PP

  == domain 5  score: 0.8 bits;  conditional E-value: 0.31
                 HHHHHHHHTT-HHHHHHHHHHH CS
       TPR_1   6 nlGnayfklgkydeAleyyekA 27 
                 nlG +    g++  A + ye+A
  KHJ31894.1 312 NLGKLAEIRGDLISAKKKYEEA 333
                 7787777788877777777776 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.73   1.2e+03      17      31 ..      68      82 ..      52      88 .. 0.76
   2 ?    6.9   0.0    0.0079        13       6      28 ..     100     122 ..      96     132 .. 0.86
   3 ?   -2.7   0.0       9.7   1.6e+04       7      31 ..     214     238 ..     213     239 .. 0.78
   4 ?   -1.0   0.0       2.9   4.7e+03       7      27 ..     313     333 ..     308     338 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.73
      TPR_14 17 pdeAiallrralala 31
                p  A++++++a++ a
  KHJ31894.1 68 PGMAMKYYKEAIRIA 82
                566999999999876 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0079
      TPR_14   6 alaeallalGdpdeAiallrral 28 
                 ++a +l+  +++d+Ai++l+++ 
  KHJ31894.1 100 QIAILLEKCEKYDKAIEVLEAIR 122
                 68999***************984 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 9.7
      TPR_14   7 laeallalGdpdeAiallrralala 31 
                 la+++++ +++  ++ l+ +al l 
  KHJ31894.1 214 LAHLHEEKDRHYLSAPLFLQALNLS 238
                 7888999889888888888888665 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 2.9
      TPR_14   7 laeallalGdpdeAiallrra 27 
                 l+++ + +Gd+  A + +++a
  KHJ31894.1 313 LGKLAEIRGDLISAKKKYEEA 333
                 788889999999999988887 PP

>> PP28  Casein kinase substrate phosphoprotein PP28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.3     0.015        24      21      39 ..     178     196 ..     140     199 .. 0.70
   2 ?    4.7   4.0     0.025        42      20      43 ..     339     367 ..     317     368 .] 0.68

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.015
        PP28  21 kkaekpkelsRrEreaiek 39 
                 + ++  kel RrEre +++
  KHJ31894.1 178 AVEQTLKELQRREREGVKE 196
                 3333445********8875 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.025
        PP28  20 e....kkaekpk.elsRrEreaiekqkak 43 
                 +    +  +k+k  l R E+eaiek++ak
  KHJ31894.1 339 KigfkEGIKKAKsALKRIEQEAIEKKQAK 367
                 25555333444449*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       759  (0.0423336); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2780.22
//
Query:       KHJ31895.1  [L=121]
Description: putative progesterone binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-11   44.5   0.0    1.6e-11   44.2   0.0    1.2  1  Cyt-b5    Cytochrome b5-like Heme/Steroid binding domain


Domain annotation for each model (and alignments):
>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.2   0.0   8.8e-16   1.6e-11       1      57 [.      22      85 ..      22     115 .. 0.75

  Alignments for each domain:
  == domain 1  score: 44.2 bits;  conditional E-value: 8.8e-16
                EHHHHTTTECTT..EEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTT.......GG CS
      Cyt-b5  1 tleelskhngkn..dlwvairgkVYDvskflskhpGgesailkyaGkDateafksvv.......hs 57
                tl el+k ng++   ++vai+gkV+Dvs    + pGg  +++++aG+Da++a++  +       h+
  KHJ31895.1 22 TLTELRKANGNDsnLCYVAIKGKVFDVSGNKAYLPGG--PYHNFAGHDASRALALTStkiedvrHE 85
                6789*****66656**************777777676..9************99887544444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 980.35
//
Query:       KHJ31896.1  [L=105]
Description: hypothetical protein EV44_g4314 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0012   19.0   0.0     0.0014   18.8   0.0    1.1  1  RNase_H   RNase H


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   7.9e-08    0.0014       3      61 ..       8      67 ..       6      87 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 7.9e-08
                SEEEEEEEEEECTTTCEEEEEEECTT..EEEEEEEC..CCCHHHHHHHHHHHHHHHTT.SC CS
     RNase_H  3 avvvYtDGsclgnpgeggagavlykegarnisaple..eaqtnnraELsAvieaLkalksd 61
                +++vY+DGs+  n g++gag+ +y ++++ + + ++  ++     aE++ ++e L+a+ s+
  KHJ31896.1  8 DLTVYSDGSSD-NAGKAGAGYSIYCGTQEIVDNWIPlgNTVEVYDAEIIGAVEGLRAACSH 67
                579******66.99*******7776755655555554367777889*********986666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       258  (0.0143901); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 781.71
//
Query:       KHJ31897.1  [L=515]
Description: putative carbohydrate-binding module family 48 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-22   79.5   0.4    3.7e-22   78.3   0.4    1.5  1  AMPK1_CBM  Glycogen recognition site of AMP-activated protein
  ------ inclusion threshold ------
      0.017   15.5   0.1      0.033   14.5   0.1    1.4  1  CBM_48     Carbohydrate-binding module 48 (Isoamylase N-termi


Domain annotation for each model (and alignments):
>> AMPK1_CBM  Glycogen recognition site of AMP-activated protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.3   0.4   4.1e-26   3.7e-22       4      81 ..      11      90 ..       9      93 .. 0.94

  Alignments for each domain:
  == domain 1  score: 78.3 bits;  conditional E-value: 4.1e-26
   AMPK1_CBM  4 vikWkggGkkVyvtGsfnnWkkkipLkksekdfsvilkLpeGthq..ykFiVDgewrvdpdlptatdeeGnlnNvievke 81
                 +kW++ +++VyvtGsf++W+k+ +L+k+++ f   + Lp    +  ykF+VDg+w++d+++p+++de GnlnNv++v++
  KHJ31897.1 11 IFKWEHPAEEVYVTGSFDDWSKSERLSKTNNIFAKEVVLPIASDKiyYKFVVDGNWVTDHTAPQENDELGNLNNVLTVDK 90
                69*******************************99999998877777*******************************86 PP

>> CBM_48  Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.1   3.7e-06     0.033      12      73 ..       8      66 ..       3      79 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.7e-06
                EEEEEEE-TTSSEEEEEECGTTTEEECCB-EEECGGCEE..EEEEETTSTTTT.EEEEEEEETT CS
      CBM_48 12 gvnfrvwapnAekVslvldfnnwdaeeiplkrrrtggvW..elflpgdlphgslrYkyrvkgps 73
                g+ +  w   Ae+V ++++f++w  ++  l++  t++++  e++lp  +  +++ Yk+ v+g++
  KHJ31897.1  8 GTFIFKWEHPAEEVYVTGSFDDW-SKSERLSK--TNNIFakEVVLP--IASDKIYYKFVVDGNW 66
                5666679999*************.67778885..788883356666..666789*******998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       898  (0.0500865); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 4039.36
//
Query:       KHJ31898.1  [L=263]
Description: putative had-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-57  192.8   0.0    3.7e-57  192.5   0.0    1.1  1  NIF       NLI interacting factor-like phosphatase


Domain annotation for each model (and alignments):
>> NIF  NLI interacting factor-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.5   0.0     2e-61   3.7e-57       1     156 []      74     249 ..      74     249 .. 0.90

  Alignments for each domain:
  == domain 1  score: 192.5 bits;  conditional E-value: 2e-61
         NIF   1 ktLVLDLDetLvhskl..eksk.........klkve.............gekvevsvlkRpgldefLkelsklyevvifTasseeyaeavidildpekk 75 
                 ktL+LDLDetL+hs +     +         k  ++             ++++ + v+kRp++defL+ ++k+y+++ifTas +eya++vid l++++k
  KHJ31898.1  74 KTLILDLDETLIHSMAkgG--RmstgnmvevK--LQtvlmagentslglQHPILYWVNKRPHCDEFLRLVCKWYNLIIFTASVQEYADPVIDLLEQDRK 168
                 79*************6330..25667877551..334455666666778899*********************************************** PP

         NIF  76 llshrlyrescvkkkgeyvKdLsllgrdlsrvvivDdspdsfelqpengipiksffsdkkDneLlkllpllkelakvddvr 156
                 l+s r+yr++c++++g+y+KdLs ++ dls+v+i+D+sp s+ ++pen+ipi+ +++d++Dn+Ll+l+pll++l++v+dvr
  KHJ31898.1 169 LFSGRYYRQHCTQRQGAYIKDLSSIEPDLSKVIILDNSPLSYMFHPENAIPIEGWINDPTDNNLLHLIPLLESLQYVTDVR 249
                 ***********877*****************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1883.98
//
Query:       KHJ31899.1  [L=225]
Description: hypothetical protein EV44_g3818 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       364  (0.0203023); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1748.79
//
Query:       KHJ31900.1  [L=971]
Description: putative kinesin motor domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.3e-97  325.0   1.1    4.9e-97  324.8   0.0    1.6  2  Kinesin      Kinesin motor domain
    1.5e-23   83.4   0.0    5.5e-23   81.6   0.0    1.9  2  Microtub_bd  Microtubule binding
  ------ inclusion threshold ------
       0.35   10.2   7.9          2    7.7   0.1    2.3  2  DUF4407      Domain of unknown function (DUF4407)
        1.8    8.6   6.4       0.32   11.0   1.4    2.4  2  FlxA         FlxA-like protein
        5.5    8.1   8.4        2.6    9.2   0.2    3.4  2  Pheromone    Fungal mating-type pheromone


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  324.8   0.0  1.4e-100   4.9e-97      37     332 ..     269     589 ..     239     590 .. 0.92
   2 ?   -3.0   0.4      0.73   2.6e+03     132     162 ..     614     655 ..     612     682 .. 0.59

  Alignments for each domain:
  == domain 1  score: 324.8 bits;  conditional E-value: 1.4e-100
                 TTSCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHTBCTTTSBSHHHHHHHHHHHHHHHCTTTHEEEEEEEEEEEEEE CS
     Kinesin  37 eeeekkfkFdkvfdeeatqeevyeetakplvesvleGynatifaYGqtgsGKTyTmegkeeeeeGiipraleelFesikkekeekekefsvkvsylEiY 135
                  +e  ++ Fd+vf+ ++++++vy+++ak+lv++v+eGy++t+faYG+tg+GKT++m+g+  +++G+ip a++++F+ i+++ ++   ef ++vsylEiY
  KHJ31900.1 269 GKEAGDYYFDNVFSYHDNNAKVYDSCAKRLVRRVMEGYHGTVFAYGMTGTGKTFSMQGT-ASSPGVIPLAITDIFSYIRETPSR---EFLLRVSYLEIY 363
                 567889****************************************************9.999*****************9988...9*********** PP

                 TTEEEETTSTTT.....TSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTSTTSSCTSHHCCSEEEEEEEEEEEETTTTTC.EE.. CS
     Kinesin 136 neeiyDLLeskk.....skkkkklkiredskkgevyvkgltevevksaeevlellekgeknrkvaetklneeSSRSHavftitleqknlkeete.ek.. 226
                 ne+i+DLL++ +     +++ +++k+redsk+g vy + l+e+ v+s +++l+++++g++ r++++t++n++SSRSHav++i +e+++++ ++   +  
  KHJ31900.1 364 NEKIHDLLTPPNsngpgNSQPEEIKLREDSKRG-VYASSLKEEIVQSPTQLLRVIARGDQARRTSSTQFNARSSRSHAVVQIVVESRERTPGSAfISgh 461
                 **********9999998778889********98.*******************************************************9998872246 PP

                 .........EEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHT.........CCTSTSCGGGSHHHHHTGGGHSSSSEEEEE CS
     Kinesin 227 .........vkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaek.........kkskhipYRdSkLTrlLqdsLgGnsktlmi 307
                          v++s+l+L+DLAGsEra++++    er++E+++iNkSLl+Lg+vi++L+ +         k  kh pYRdSkLTrlLq +L+Gns + ++
  KHJ31900.1 462 nrtsntpggVRVSTLSLIDLAGSERAAESK----ERRTEGSHINKSLLTLGTVIAKLSGNkdrdgkptdKDGKHLPYRDSKLTRLLQGALSGNSLVSIL 556
                 78999********************99988....4789********************999*******9999*************************** PP

                 EEE-TBGG........GHHHHHHHHHHHHHHCT CS
     Kinesin 308 vtvspsse........nleetlstlkfaerake 332
                 +t++  +         +++etl+tlkfa+rak+
  KHJ31900.1 557 CTIQIGAAgntaslstHMSETLNTLKFASRAKN 589
                 ***86433333334459**************97 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.73
                 EEEETTEEEETTSTTT...........TSTSSEBEEEECTTS CS
     Kinesin 132 lEiYneeiyDLLeskk...........skkkkklkiredskk 162
                 lE Y  ei DL ++ +           ++++k+ +ir+d++ 
  KHJ31900.1 614 LERYRMEILDLRSQLEaqakskteddeREREKEAEIRHDEQM 655
                 667777888876666555555555554444445666666653 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.6   0.0   1.5e-26   5.5e-23      17     149 .]     229     371 ..     226     371 .. 0.91
   2 ?   -2.3   0.1       1.1   3.9e+03      83     125 ..     552     599 ..     538     604 .. 0.57

  Alignments for each domain:
  == domain 1  score: 81.6 bits;  conditional E-value: 1.5e-26
                  HHCTB-EEEEEEECCCS-T.EEEETT.T..............TTTEEEE-SEEEECTTHCCCCCCCC.HHHHHHHHTT--EEEEEEES.......... CS
  Microtub_bd  17 elkGniRvfarvrpelesekakikfp.e...........eekkkkkefsFdrvfeseseqeevfeei.sqlvqsaldgynvcifaygqTGsGKtyTme 101
                  e+kGn+ v +rvrp+  s+ ++ k++ e              k++ ++ Fd vf+ + ++++v++ + + lv  +++gy+ ++fayg TG GKt+ m+
   KHJ31900.1 229 EVKGNVLVSVRVRPDIGSN-IACKTEgEwmvdgrraliaCRGKEAGDYYFDNVFSYHDNNAKVYDSCaKRLVRRVMEGYHGTVFAYGMTGTGKTFSMQ 325
                  99****************8.56666642556677889986689999******************99835799************************** PP

                  ......ST-HCHHHHHHHHHHCCTSCCCCEEEEEEEEEEESS-EEETT CS
  Microtub_bd 102 geeeeagmipraveeifetiselkekgwkyeielqfveiynekvqDlL 149
                  g+ +++g+ip a++ if+ i+e+   + ++ ++++++eiynek++DlL
   KHJ31900.1 326 GTASSPGVIPLAITDIFSYIRET--PSREFLLRVSYLEIYNEKIHDLL 371
                  ***********************..99********************8 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.1
                  -EEEEEEES.....................ST-HCHHHHHHHHHHCCT CS
  Microtub_bd  83 nvcifaygqTG.sGKtyTmeg....eeeeagmipraveeifetiselk 125
                   v+i+++ q G +G t  +++    + ++ +   ra +++++ +++ +
   KHJ31900.1 552 LVSILCTIQIGaAGNTASLSThmseTLNTLKFASRAKNNLVSHAKKAE 599
                  456666555552355555444333366677777777777777777664 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   3.7    0.0063        22     163     261 ..     591     683 ..     554     687 .. 0.64
   2 ?    7.7   0.1   0.00055         2     130     207 ..     772     854 ..     719     938 .. 0.72

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0063
     DUF4407 163 aqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakldatarlaalraelaeleaerakeraasqaaaaaddGllarlealdrltkedatal 261
                 + ++++    ++  g aG+g+    ++  l++++ e+ +l+++l+a+a+ ++ ++e+++ +++ ++  ++  +++ a + l +r+e l+rl+ ++++ +
  KHJ31900.1 591 LVSHAKK--AEESYGQAGDGA----ARVLLERYRMEILDLRSQLEAQAKSKTEDDEREREKEAEIRHDEQMLEMQLARTALKERIEHLNRLILSSKSTG 683
                 3333332..333445666665....4556666777777777777766666666666655555555555556666788899***********99988765 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00055
     DUF4407 130 altaelaeleaqiaalqaeidaaearldalraeaqkeldgtk.gtgttgvaGkgp....aakekkaqldaaqaelaelkakld 207
                 +l a+ ++l+a++a+  +  +++e+rl ++r+   + ++  + + g ++v G+ +    + kek++++++++a+l++ ++ l 
  KHJ31900.1 772 SLAAQNRALQADLADKTRYCQTLEKRLIQARRSSHSRASISFsTVGKNNVTGEDQnflmVLKEKDSEIADLKARLDDKERMLA 854
                 27777888888888888888888888888888888888887784444444444440000556677777777777777555433 PP

>> FlxA  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.4   8.9e-05      0.32      25      68 ..     620     663 ..     603     673 .. 0.88
   2 ?   -3.2   0.3       2.4   8.8e+03       3      22 ..     917     936 ..     900     947 .. 0.53

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 8.9e-05
        FlxA  25 QiknlqkqLkelsesdeltkeekkkqqqliqaQIqqlqaQIaql 68 
                 +i +l  qL+  ++s+++++e  ++++ +i    q+l++Q+a+ 
  KHJ31900.1 620 EILDLRSQLEAQAKSKTEDDEREREKEAEIRHDEQMLEMQLART 663
                 677899999999999999999999******************96 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.4
        FlxA   3 sssasssssssgsasqiasL 22 
                 s+s+  +++s+g++++++ +
  KHJ31900.1 917 SISSPVKERSKGMDDRSKII 936
                 33333344444444444444 PP

>> Pheromone  Fungal mating-type pheromone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.2   0.00072       2.6      23      59 ..     181     213 ..     155     217 .. 0.78
   2 ?   -0.5   3.4      0.77   2.8e+03      17      44 ..     894     921 ..     882     927 .. 0.60

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00072
   Pheromone  23 alfasssspspspalsssasasddevlavpvDaErrg 59 
                  l+  +s+p+    ++ss+++s  +  + +vD+Er+ 
  KHJ31900.1 181 HLLNLPSPPQ----SRSSSPQSLNPNFDQNVDYERGR 213
                 4455566666....79*******************86 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.77
   Pheromone  17 aessesalfasssspspspalsssasas 44 
                 ++ss+++++ +++ +s s+++s+s s+ 
  KHJ31900.1 894 NRSSSLSSSSPRELQSLSTSTSDSISSP 921
                 3455555555555555566666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (971 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1073  (0.0598472); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.72u 0.27s 00:00:00.99 Elapsed: 00:00:00.39
# Mc/sec: 7423.82
//
Query:       KHJ31901.1  [L=251]
Description: putative 60s ribosomal protein l7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-29  100.9  17.2    5.9e-29  100.1  17.2    1.4  1  Ribosomal_L30_N  Ribosomal L30 N-terminal domain
    5.3e-18   64.6   2.6    5.3e-18   64.6   2.6    1.7  2  Ribosomal_L30    Ribosomal protein L30p/L7e
  ------ inclusion threshold ------
      0.084   12.4   4.9       0.14   11.7   4.9    1.2  1  DUF5394          Family of unknown function (DUF5394)
        6.6    6.7  11.0        9.4    6.2  11.0    1.1  1  Clathrin_lg_ch   Clathrin light chain


Domain annotation for each model (and alignments):
>> Ribosomal_L30_N  Ribosomal L30 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.1  17.2   1.3e-32   5.9e-29       1      72 []      16      87 ..      16      87 .. 0.99

  Alignments for each domain:
  == domain 1  score: 100.1 bits;  conditional E-value: 1.3e-32
  Ribosomal_L30_N  1 vPEsllKKrkrneklkakrakkaaakkkankkkrklifkRaekYvkEYrqkereeirlkReAkkaGnfyvpa 72
                     vPE+llKKrk++ek +++ra++ +++kk +k+kr++ifkRaekYvkEYr++ere+irl R Ak++Gnfy+pa
       KHJ31901.1 16 VPETLLKKRKSQEKSREERAAELEKRKKVQKEKRSVIFKRAEKYVKEYRDQEREKIRLSRIAKQEGNFYIPA 87
                     8**********************************************************************8 PP

>> Ribosomal_L30  Ribosomal protein L30p/L7e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.6   2.6   1.2e-21   5.3e-18       1      51 []      92     142 ..      92     142 .. 0.98
   2 ?   -3.1   0.0       1.7   7.7e+03      44      51 .]     149     156 ..     148     156 .. 0.87

  Alignments for each domain:
  == domain 1  score: 64.6 bits;  conditional E-value: 1.2e-21
                    EEEEE-S-STTS-HHHHHHHHHTT-SSTT.EEEE--SSHHHHHHHHHCCCGE CS
  Ribosomal_L30   1 lfVtrirsiigvppkvrktLqlLgLrkin.gtvvklntpsirGmLkkVkhlV 51 
                    +fV+ri++i+++ pk rk+LqlL+L +in g++v+l+++++  mLk+V++++
     KHJ31901.1  92 VFVVRIKGINKIAPKPRKILQLLRLLQINnGVFVRLTKATLE-MLKIVEPWI 142
                    69****************************************.*******97 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.7
                    HHHCCCGE CS
  Ribosomal_L30  44 LkkVkhlV 51 
                    Lk V++lV
     KHJ31901.1 149 LKTVRELV 156
                    89999998 PP

>> DUF5394  Family of unknown function (DUF5394)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   4.9   3.1e-05      0.14      72     138 ..      14      79 ..      11      88 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 3.1e-05
     DUF5394  72 illikklLkskksskkk.ieltkeleqqitkqiakiskeliykhtrtlaeenkdLekekdkleelses 138
                 il+ + lLk++ks++k+ +e + ele++  k++ k  + +i+k++ +   e +d e+ek +l  ++++
  KHJ31901.1  14 ILVPETLLKKRKSQEKSrEERAAELEKR--KKVQKEKRSVIFKRAEKYVKEYRDQEREKIRLSRIAKQ 79 
                 5556788998887766515666777887..*********************************99996 PP

>> Clathrin_lg_ch  Clathrin light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2  11.0    0.0021       9.4     123     163 ..      31      71 ..      22      84 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0021
  Clathrin_lg_ch 123 ReerkkeieerdeasekkkeetkekAkkeiddfyenynekk 163
                     Reer++e+e+r + +++k+  + + A+k ++++ ++  ek 
      KHJ31901.1  31 REERAAELEKRKKVQKEKRSVIFKRAEKYVKEYRDQEREKI 71 
                     9********************************99998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1952  (0.108874); expected 358.6 (0.02)
Passed bias filter:                      845  (0.0471303); expected 358.6 (0.02)
Passed Vit filter:                        94  (0.0052429); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 1894.88
//
Query:       KHJ31902.1  [L=126]
Description: putative ring-box protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-25   88.1  13.1    4.8e-25   87.6  13.1    1.3  1  zf-rbx1       RING-H2 zinc finger domain
    2.5e-16   59.5   9.9    3.7e-16   59.0   9.9    1.2  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
    2.8e-06   27.5  14.6    9.7e-05   22.6  14.6    2.2  1  zf-RING_2     Ring finger domain
     0.0019   18.0  12.0      0.032   14.1  12.0    2.4  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
     0.0042   16.9  15.0       0.28   11.1  15.0    2.4  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
       0.16   11.8  10.7       0.47   10.3   4.4    2.6  2  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
       0.53   10.3   7.7        1.9    8.6   7.7    2.0  1  zf-RING_UBOX  RING-type zinc-finger
       0.53   10.1  16.2         41    4.1  16.2    2.4  1  zf-RING_11    RING-like zinc finger
       0.63   10.3   9.3        3.2    8.0   9.5    1.9  2  FANCL_C       FANCL C-terminal domain
       0.78    9.4  14.9       0.14   11.8   4.7    2.2  2  Zn_ribbon_17  Zinc-ribbon, C4HC2 type


Domain annotation for each model (and alignments):
>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.6  13.1   2.7e-28   4.8e-25       1      55 []      58     116 ..      58     116 .. 0.97

  Alignments for each domain:
  == domain 1  score: 87.6 bits;  conditional E-value: 2.7e-28
     zf-rbx1   1 dtCaiCrneleeacieckapgdee....cpvvlGeCgHaFHlhCiskWlktrkvCPlcr 55 
                 d+CaiCrn++++ ciec+a++ +     c+v++G C+HaFH+hCis+Wlktr+vCPl++
  KHJ31902.1  58 DNCAICRNHIMDLCIECQANQASAtseeCTVAWGICNHAFHFHCISRWLKTRQVCPLDN 116
                 79******************99989999*****************************97 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.0   9.9     2e-19   3.7e-16       4      84 ..      41     122 ..      39     123 .. 0.86

  Alignments for each domain:
  == domain 1  score: 59.0 bits;  conditional E-value: 2e-19
                 EEEEEEE--B--B.-SSSSB-TTT-SBTTS--TTCST.....TTTTS-EEEBTTS-EEEHHHHHHHHHHHSTSSB-TTTSSB--BE CS
  zf-ANAPC11   4 kikevksvatwswdvasddvcGicrvsfdGtcpsckf.....pGddcplvlGkckhnfhlhcilkwletetskglcpmcrqtfklk 84 
                 ++k++ +va w wd+   d+c icr +    c +c+        ++c++ +G c+h+fh hci +wl+t+   + cp++ + ++ +
  KHJ31902.1  41 EVKKWSAVALWAWDIVV-DNCAICRNHIMDLCIECQAnqasaTSEECTVAWGICNHAFHFHCISRWLKTR---QVCPLDNRDWEYQ 122
                 799************97.57***************86222225799*********************975...67**999988766 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6  14.6   5.4e-08   9.7e-05      10      42 ..      81     114 ..      58     116 .. 0.66

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 5.4e-08
   zf-RING_2  10 lssadsvl.llpCgHvfhreClerwlrssstCPl 42 
                  +s+++++ +  C+H fh++C++rwl++++ CPl
  KHJ31902.1  81 ATSEECTVaWGICNHAFHFHCISRWLKTRQVCPL 114
                 233344442335*********************8 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1  12.0   1.8e-05     0.032       1      40 [.      60     114 ..      60     114 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.8e-05
                 -TTT-S--SS-E..................E-TTS--B-CHHHHHHHHCTSSB--TT CS
    zf-C3HC4   1 CpiCleeakepn.................elleCkHsfCskCirkilksrkkvkCPl 40 
                 C+iC + +++ +                     C+H+f+++Ci+++lk  + + CPl
  KHJ31902.1  60 CAICRNHIMDLCiecqanqasatseectvAWGICNHAFHFHCISRWLK--TRQVCPL 114
                 888888888888888888889989988877778***************..5556*96 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1  15.0   0.00016      0.28      17      39 ..      92     114 ..      59     114 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00016
  zf-C3HC4_2  17 pCgHvfCqkCilrsLeekneCPl 39 
                  C+H f+  Ci r+L+  + CPl
  KHJ31902.1  92 ICNHAFHFHCISRWLKTRQVCPL 114
                 6*********************7 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.3     0.012        22      38      48 ..      58      68 ..      52      70 .. 0.83
   2 ?   10.3   4.4   0.00026      0.47       4      46 ..      70     118 ..      68     121 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.012
                -B-TTT--B-- CS
  zf-C3HC4_3 38 kkCpiCrrpie 48
                ++C iCr +i 
  KHJ31902.1 58 DNCAICRNHIM 68
                68999999985 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00026
                 B-TTTSSSBS-EEETT.......EEEEEE-HHHHHHHHHTT-B-TTT--B CS
  zf-C3HC4_3   4 eCviClerprnvvllp.......CgHlvlCeeCaekllkrkkkCpiCrrp 46 
                 +C+ C+ ++++++  +       C+H  +  +C +++lk ++ Cp+ +r+
  KHJ31902.1  70 LCIECQANQASATSEEctvawgiCNHA-FHFHCISRWLKTRQVCPLDNRD 118
                 799999975555444422233348999.889**************98776 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   7.7    0.0011       1.9       1      39 []      60     113 ..      60     113 .. 0.61

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0011
  zf-RING_UBOX   1 CpICle.lft..............dPlvlp.......CGHtFCreClwelskslegafkCP 39 
                   C IC++  ++              +    +       C H F+ +C+   s++l+++  CP
    KHJ31902.1  60 CAICRNhIMDlciecqanqasatsE----EctvawgiCNHAFHFHCI---SRWLKTRQVCP 113
                   6666642333555555544443331....02222334**********...99999999999 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1  16.2     0.023        41      13      29 .]      84     102 ..      59     102 .. 0.72

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.023
  zf-RING_11  13 qalfilp..CsHtFHfkCI 29 
                 ++ +++   C+H+FHf+CI
  KHJ31902.1  84 EECTVAWgiCNHAFHFHCI 102
                 344444356*********9 PP

>> FANCL_C  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.3      0.27   4.8e+02      52      65 ..      54      67 ..      51      71 .. 0.71
   2 ?    8.0   9.5    0.0018       3.2       4      44 ..      59     109 ..      56     113 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.27
                T--EEE-TTT-SEE CS
     FANCL_C 52 dvlfGeCPyCkkki 65
                d+++ +C  C++ i
  KHJ31902.1 54 DIVVDNCAICRNHI 67
                67777777777665 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0018
                 S-SSS--SS-........TT-----B--S-T..T----B-SGGGHHHHHHH CS
     FANCL_C   4 eCgiCyayrl........dsgevpdisCdne..kCnkkfHsaCLkeWlrsl 44 
                 +C iC ++ +        ++ + +   C  +   Cn+ fH +C+  Wl++ 
  KHJ31902.1  59 NCAICRNHIMdlciecqaNQASATSEECTVAwgICNHAFHFHCISRWLKTR 109
                 5777766666666666555555666666654227**************986 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   4.6      0.11     2e+02       5      25 ..      58      78 ..      55      91 .. 0.72
   2 ?   11.8   4.7   7.6e-05      0.14      22      46 ..      91     113 ..      80     114 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.11
  Zn_ribbon_17  5 ksCayCelavkgrvvlcgvCe 25
                   +Ca+C  ++  +++ c++ +
    KHJ31902.1 58 DNCAICRNHIMDLCIECQANQ 78
                  58*****99999999998765 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 7.6e-05
  Zn_ribbon_17  22 gvCeHvlHasCarewfenddlaeCp 46 
                   g C+H  H+ C++ w+++ +  +Cp
    KHJ31902.1  91 GICNHAFHFHCISRWLKTRQ--VCP 113
                   68**************9998..998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       848  (0.0472977); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.43
# Mc/sec: 878.11
//
Query:       KHJ31903.1  [L=359]
Description: putative alpha-tubulin suppressor protein aats1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-28   97.6   8.1    1.4e-07   32.0   0.1    6.3  6  RCC1      Regulator of chromosome condensation (RCC1) repeat
    4.1e-19   67.9  26.7    6.8e-07   28.9   2.5    6.8  7  RCC1_2    Regulator of chromosome condensation (RCC1) repeat


Domain annotation for each model (and alignments):
>> RCC1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   1.6e-08   0.00014       3      50 .]       3      53 ..       3      53 .. 0.87
   2 !   18.0   0.0   3.8e-07    0.0034       3      49 ..     116     165 ..     114     166 .. 0.78
   3 !   32.0   0.1   1.6e-11   1.4e-07       1      50 []     169     216 ..     169     216 .. 0.91
   4 !    9.0   0.1   0.00024       2.1       1      15 [.     261     275 ..     261     277 .. 0.92
   5 ?    1.7   0.0     0.044     4e+02      35      48 ..     280     294 ..     276     296 .. 0.79
   6 !   13.1   0.9   1.2e-05      0.11       1      16 [.     299     314 ..     299     327 .. 0.92

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 1.6e-08
                EEEEEE--GGGTTSSSS---EEEEEE-GGGTTS...-EEEEEEETTEEEEE CS
        RCC1  3 rVysWGrndyGqLGlgttesvlvPtkveglsgn...rvvkvacGddhtval 50
                ++y++G+n  GqL + ++++v+ P k   l++     +++  +G++ht++l
  KHJ31903.1  3 QIYAFGSNGSGQLAINHKNDVSMPEKTFVLDEFpinSIKQLRAGGNHTLLL 53
                69**********************888555544555************986 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 3.8e-07
                 EEEEEE--GGGTTSSSS---EEEE..EE-.GGGTTS.-EEEEEEETTEEEE CS
        RCC1   3 rVysWGrndyGqLGlgttesvlvP..tkv.eglsgn.rvvkvacGddhtva 49 
                 +Vy+ G++ yG LG+g t sv +P  +++ e+++ + ++++ a+  +h+v+
  KHJ31903.1 116 KVYTLGNGYYGELGQGETISV-LPdaMLIkEFPPPRlEIKDLAASVSHVVV 165
                 7*****************999.89664445333334599999999999987 PP

  == domain 3  score: 32.0 bits;  conditional E-value: 1.6e-11
                 TTEEEEEE--GGGTTSSSS-.--EEEEEE-GGGTTS-EEEEEEETTEEEEE CS
        RCC1   1 dGrVysWGrndyGqLGlgtt.esvlvPtkveglsgnrvvkvacGddhtval 50 
                 +G+ y+WG++ +Gq G +++ + +  P+k+ gl+  ++v v+cG  +t++l
  KHJ31903.1 169 NGEAYGWGNGRKGQIGEPKRnVHR--PRKILGLD-FKIVRVVCGREFTCLL 216
                 6999*************8886777..****9997.5************976 PP

  == domain 4  score: 9.0 bits;  conditional E-value: 0.00024
                 TTEEEEEE--GGGTT CS
        RCC1   1 dGrVysWGrndyGqL 15 
                 +G+V sWGrnd+ qL
  KHJ31903.1 261 NGKVVSWGRNDQCQL 275
                 59999*********9 PP

  == domain 5  score: 1.7 bits;  conditional E-value: 0.044
                 S.-EEEEEEETTEEE CS
        RCC1  35 n.rvvkvacGddhtv 48 
                   +v ++a G+ h +
  KHJ31903.1 280 LpEVLQIAVGSEHAL 294
                 34899********86 PP

  == domain 6  score: 13.1 bits;  conditional E-value: 1.2e-05
                 TTEEEEEE--GGGTTS CS
        RCC1   1 dGrVysWGrndyGqLG 16 
                 dG+V +WG++++G +G
  KHJ31903.1 299 DGNVIAWGWGEHGNCG 314
                 8**************9 PP

>> RCC1_2  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.1    0.0012        11      20      30 .]       4      14 ..       3      14 .. 0.93
   2 !    7.6   0.1   0.00038       3.4       1      22 [.      40      60 ..      40      68 .. 0.75
   3 ?   -1.2   0.0      0.22     2e+03      17      29 ..     114     126 ..     113     127 .. 0.88
   4 !   23.9   0.3     3e-09   2.6e-05       1      30 []     153     182 ..     153     182 .. 0.98
   5 ?    2.1   0.0     0.019   1.7e+02       1      14 [.     203     216 ..     203     218 .. 0.89
   6 !   13.0   0.5   7.5e-06     0.067      13      27 ..     257     271 ..     248     273 .. 0.93
   7 !   28.9   2.5   7.6e-11   6.8e-07       1      29 [.     283     311 ..     283     314 .. 0.94

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0012
      RCC1_2 20 VlcWGsNsdGQ 30
                ++++GsN++GQ
  KHJ31903.1  4 IYAFGSNGSGQ 14
                79********9 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00038
      RCC1_2  1 VksvsaGdyHscaLtedGeVlc 22
                +k++ aG++H++  ++ G++++
  KHJ31903.1 40 IKQLRAGGNHTLL-LTGGHLYT 60
                68889*******5.55555555 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.22
      RCC1_2  17 dGeVlcWGsNsdG 29 
                 +++V++ G+  +G
  KHJ31903.1 114 SNKVYTLGNGYYG 126
                 689*****99998 PP

  == domain 4  score: 23.9 bits;  conditional E-value: 3e-09
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsNsdGQ 30 
                 +k+++a ++H ++++++Ge ++WG+   GQ
  KHJ31903.1 153 IKDLAASVSHVVVVLNNGEAYGWGNGRKGQ 182
                 799**************************9 PP

  == domain 5  score: 2.1 bits;  conditional E-value: 0.019
      RCC1_2   1 VksvsaGdyHscaL 14 
                 ++ v +G+ ++c L
  KHJ31903.1 203 IVRVVCGREFTCLL 216
                 6889********87 PP

  == domain 6  score: 13.0 bits;  conditional E-value: 7.5e-06
      RCC1_2  13 aLtedGeVlcWGsNs 27 
                 +L e+G+V++WG+N+
  KHJ31903.1 257 VLKENGKVVSWGRND 271
                 799**********95 PP

  == domain 7  score: 28.9 bits;  conditional E-value: 7.6e-11
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsNsdG 29 
                 V +++ G+ H+++Lt+dG+V +WG+ ++G
  KHJ31903.1 283 VLQIAVGSEHALGLTTDGNVIAWGWGEHG 311
                 78***********************9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       250  (0.0139439); expected 358.6 (0.02)
Passed bias filter:                      243  (0.0135535); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2652.38
//
Query:       KHJ31904.1  [L=468]
Description: putative cyclin-dependent kinase g-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.5e-62  209.1   0.0    1.2e-61  208.4   0.0    1.3  1  Pkinase      Protein kinase domain
    9.7e-28   97.1   0.0    1.6e-27   96.5   0.0    1.3  1  Pkinase_Tyr  Protein tyrosine kinase
    0.00057   19.3   0.0    0.00057   19.3   0.0    1.7  2  Kinase-like  Kinase-like
  ------ inclusion threshold ------
       0.13   12.1   0.0       0.24   11.3   0.0    1.4  1  APH          Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  208.4   0.0   2.7e-65   1.2e-61       1     264 []     111     401 ..     111     401 .. 0.94

  Alignments for each domain:
  == domain 1  score: 208.4 bits;  conditional E-value: 2.7e-65
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE.....SSEEEEEEE--TTEBHHHHHH.HHS CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee.....kdelylvleyveggeladlle.rkg 93 
                 yekl+ + eG++G V +a+e +tgkiv++Kk+k e a++    + lrEi+ l+ ++hpni++l+ev+        ++++lvl++ e++ l++lle  + 
  KHJ31904.1 111 YEKLNDIAEGAYGWVSRAKEISTGKIVVLKKLKMETANDGIPVTGLREIQTLRDCDHPNILELKEVVIGddisqIRNVFLVLDFYEHD-LKTLLEdMSE 208
                 7889999***********************************************************9876666678999*******77.*****94445 PP

                 S--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHH CS
     Pkinase  94 slseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvl.keneyskkvDvWslGvilyel 190
                  + ++e+k ++ qi++g  ylH++ i+HrDlK++N+L++++g+lKi+DFG+a+ + s  + +t+ v+t +Y+APE+l ++++y++++D+Ws+G+i+ el
  KHJ31904.1 209 PFLQSEIKTLLLQIVSGTLYLHNNWILHRDLKTSNLLLNNRGVLKIADFGMARYFGSPPPnMTQLVVTLWYRAPELLlGTKHYDTAIDMWSIGCIFGEL 307
                 5******************************************************999888****************999999**************** PP

                 HHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS..........................-HHHHHHHHHHT-SSGCCSTTHHHHHTSG CS
     Pkinase 191 ltgkppfsgekgkekvekeldqlekilkilg.etkeklpeasei..........................seeakdllkkllkkdpkkRltaeellqhp 262
                 l++ p+++g++       e dql ki+++ g +t++++p  + +                           ++  +ll +ll+ +p++R+ta+e+l+hp
  KHJ31904.1 308 LSKDPLLQGKN-------ESDQLSKIFELCGtPTEQTWPGFKRLpnarhlrllqnpisqgsvlrarfpflTSTGSSLLIDLLSLNPTNRPTADEMLNHP 399
                 ********444.......56677889999998889999999999******************************************************* PP

                 GG CS
     Pkinase 263 yl 264
                 ++
  KHJ31904.1 400 FF 401
                 *8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.5   0.0   3.5e-31   1.6e-27       4     207 ..     114     314 ..     111     340 .. 0.86

  Alignments for each domain:
  == domain 1  score: 96.5 bits;  conditional E-value: 3.5e-31
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH.HHHHHHHHHHHHTS-BTTB--EEEEEE.....SSSSEEEEEE--TTEBHHHHHHHT CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee.keelleeakimkklkhpnivkllgvct.....keepllivteyvkgGdLlkfLrkk 95 
                   ++++eGa+G V +++      ++   V++K+lk e+ ++      l+e++++++++hpni++l  v++     + +++++v+++ ++ dL++ L++ 
   KHJ31904.1 114 LNDIAEGAYGWVSRAKEI----STGKIVVLKKLKMETANDGiPVTGLREIQTLRDCDHPNILELKEVVIgddisQIRNVFLVLDFYEH-DLKTLLEDM 206
                  57899**********999....7788899999987776666478899*********************97766555669******998.9*******9 PP

                  CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHHH CS
  Pkinase_Tyr  96 ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDvWsfG 192
                   +e++  +++  + lq+ +G  yL+++ ++Hrdl + N Ll+++ v ki+DfG+ar     +   + ++  + + + apE l  +k + ++ D+Ws G
   KHJ31904.1 207 -SEPFLQSEIKTLLLQIVSGTLYLHNNWILHRDLKTSNLLLNNRGVLKIADFGMARYF--GSPPPNMTQLVVTLWYRAPELLLGTKhYDTAIDMWSIG 301
                  .99999***************************************************9..56666777888888889***9876555*********** PP

                  HHHHHHHTTSSGTTT CS
  Pkinase_Tyr 193 vllwEiftlgespyp 207
                   +  E+++  ++p+ 
   KHJ31904.1 302 CIFGELLS--KDPLL 314
                  ******99..55544 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   1.0      0.78   3.5e+03      50      92 ..      23      62 ..      15      82 .. 0.64
   2 !   19.3   0.0   1.3e-07   0.00057     101     237 ..     176     301 ..     167     335 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.78
  Kinase-like 50 easkkdlerlkeqelairllrgknpeqAkdhlrlllpfdlvki 92
                 ++ +k+ +rl+ ++l  ++   + + q  +h + l ++dl k 
   KHJ31904.1 23 RNTRKEKKRLEAEKLHKKD---ETETQHPKHQQHLNAIDLTKE 62
                 6777777777777777777...666666677777777777664 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 1.3e-07
  Kinase-like 101 lkskesiywvvnallllpaasvdleilnkvlqkrsethkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkv 198
                  +  ++ i  ++n +l+l   + dl++l + + +       l+   + ll lq++    +L+++ ++h +++  nlll+++g l++ +f+  +  g   
   KHJ31904.1 176 VVIGDDISQIRNVFLVLDFYEHDLKTLLEDMSEPF-----LQSEIKTLL-LQIVSGTLYLHNNWILHRDLKTSNLLLNNRGVLKIADFGMARYFGSPP 267
                  566788999***************99999887643.....344445666.799***********************************9887777777 PP

  Kinase-like 199 vlseve....kgfaPpEllgsrggytrknktkmthkldaWqlG 237
                  + ++++      +  pEll   +         +  ++d W +G
   KHJ31904.1 268 P-NMTQlvvtLWYRAPELLLGTKH--------YDTAIDMWSIG 301
                  7.6666554444666666655333........33355555555 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   5.3e-05      0.24     167     198 ..     233     262 ..     195     263 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.3e-05
                 EEE-SS-SGGGEEEC..TTEEEEE---TT-EE CS
         APH 167 vllHgDlhpgNllvdpddgrvtGviDfedagl 198
                  +lH+Dl++ Nll++  +  v  + Df++a++
  KHJ31904.1 233 WILHRDLKTSNLLLN--NRGVLKIADFGMARY 262
                 589************..56666899***9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1068  (0.0595683); expected 358.6 (0.02)
Passed bias filter:                      562  (0.0313459); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 3470.03
//
Query:       KHJ31905.1  [L=452]
Description: putative dna repair protein rad9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-50  171.0   3.1    4.3e-50  170.5   3.1    1.2  1  Rad9      Rad9


Domain annotation for each model (and alignments):
>> Rad9  Rad9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.5   3.1   2.4e-54   4.3e-50       4     250 .]      19     286 ..      16     286 .. 0.93

  Alignments for each domain:
  == domain 1  score: 170.5 bits;  conditional E-value: 2.4e-54
        Rad9   4 alqclsrigdelyleisedglelrtvnssrSayalvtlk.ksfFdky.......ekevseqirckilvKsvlsvfr.....slsakektvekvkisi.. 87 
                 +l cl ++++ + +e se++l l+t+ns++Saya++tl+ +++F++y       ek  +e++++ki  ++++svf+        +ke+ vek++  i  
  KHJ31905.1  19 LLICLGKFSEYVSIEVSEQKLVLTTLNSTNSAYASFTLSaSKYFSRYdykpvrtEKGLKEKFNLKIFNRALVSVFKgrtidQNKEKETAVEKCDAYIdd 117
                 689***********************************7368***********99999******************7777755668999********76 PP

        Rad9  88 ...dekksrlivqllCkhgvkkthkisledseslkavfdkettpsklriksrvLsdllehfsssleeitielakervllksyeeeekdn....kkalst 179
                      ++sr +++++C+hgv k +k+++e++ s++a+fd+e   + ++i+s+vL+++++hf   +e++ i l+ +rv ++s++e+        kk+l+t
  KHJ31905.1 118 deeGGSQSRFVIEITCRHGVCKIYKLTFESHPSMHAIFDTENASNCWSISSKVLREFTDHFGPGTEQLDIYLEDGRVNFTSFTEKILLGneilKKPLHT 216
                 5444578*****************************************************************************9754446678***** PP

        Rad9 180 elsideeeFeqyqlaedveitlslkefkallvfaeslsaslslafdeaGkPllltikklslleakfilaTl 250
                 ++ +d+ eF q++++e  +i +++k+fka+++ +  l++ ++++++++ +P+ lt +    +  kfil T+
  KHJ31905.1 217 TIAMDTLEFSQFTVEESLHIVINVKDFKAIIAHCGILNVTVNVSYSQPSSPMQLTYDL-DGISSKFILMTV 286
                 *******************************************************985.799999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.20s 00:00:00.66 Elapsed: 00:00:00.35
# Mc/sec: 3827.07
//
Query:       KHJ31906.1  [L=293]
Description: hypothetical protein EV44_g0464 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0075   15.9   0.0      0.012   15.3   0.0    1.3  1  Nt_Gln_amidase  N-terminal glutamine amidase
  ------ inclusion threshold ------
      0.046   13.3   0.1      0.071   12.7   0.1    1.2  1  Herpes_U26      Human herpesvirus U26 protein


Domain annotation for each model (and alignments):
>> Nt_Gln_amidase  N-terminal glutamine amidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.3e-06     0.012      28     100 ..     161     238 ..     148     260 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.3e-06
  Nt_Gln_amidase  28 elfvvfisnekktvplwkqkaskeadelviWd...YhvillaeekekekeetlvyDlDsklp...fpvsleeYlektlr 100
                     ++++   +n++  +  ++q+++ ++++lv+Wd   Y   ++++   +++ + ++yD Ds+++    p  l+ Y + t+ 
      KHJ31906.1 161 NVMATCAANKQLYTIQMNQTVA-NNTGLVVWDtgkYQATAVQNPLLTQTYTLIIYDSDSSISavaQPGLLAVYNQYTFG 238
                     4555555666655556666666.799*****9999************************99855556667777777775 PP

>> Herpes_U26  Human herpesvirus U26 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1     8e-06     0.071      20      89 ..     207     277 ..     195     285 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 8e-06
  Herpes_U26  20 glytfrmtegrssleqigvlitvaisflltfkkfdprfykpigdfkivfls.lmaaklpsllsavvmicli 89 
                   yt+ + +  ss+  +     +a+    tf  + p+ y p+gdfk v     ++ k  s+ls v  + +i
  KHJ31906.1 207 QTYTLIIYDSDSSISAVAQPGLLAVYNQYTFGMYSPQPYTPLGDFKCVTCNgALSEKERSVLSLVFGMSII 277
                 56777777888888888887788999999*****************9976427889999999998765554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       659  (0.0367561); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2292.41
//
Query:       KHJ31907.1  [L=558]
Description: putative rni-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 4083.33
//
Query:       KHJ31908.1  [L=555]
Description: putative camk protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.7e-60  202.7   0.0    1.1e-58  198.7   0.0    2.1  1  Pkinase         Protein kinase domain
    5.2e-28   98.0   0.0      5e-27   94.8   0.0    2.0  1  Pkinase_Tyr     Protein tyrosine kinase
    1.3e-12   47.9   0.2    3.4e-12   46.6   0.2    1.8  1  FHA             FHA domain
    1.1e-07   31.5   0.0     0.0001   21.8   0.0    2.2  2  Kinase-like     Kinase-like
    1.6e-05   23.9   0.0    2.7e-05   23.2   0.0    1.2  1  Pkinase_fungal  Fungal protein kinase
    0.00019   21.7   0.0    0.00081   19.7   0.0    2.0  1  Yop-YscD_cpl    Inner membrane component of T3SS, cytoplasmic
    0.00049   19.5   0.0      0.001   18.4   0.0    1.5  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.036   14.0   0.1        0.1   12.5   0.1    1.7  1  Rsd_AlgQ        Regulator of RNA polymerase sigma(70) subunit


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  198.7   0.0     5e-62   1.1e-58       4     263 ..     173     460 ..     170     461 .. 0.93

  Alignments for each domain:
  == domain 1  score: 198.7 bits;  conditional E-value: 5e-62
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.......................HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE- CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkke.......................kkvlrEikilkklkhpnivrlyevfeekdelylvley 79 
                 ++ lG+G +G V+ a+++ t+++ ++K+++ +ka ++ +                       k vlrEi+il kl+hp+i++l+e+f+++++ly+++e+
  KHJ31908.1 173 DRVLGKGHYGAVFLAKDNLTSRQLVCKVVELNKAAEEITktiqpdlvgqrwinnihrdgdgkKLVLREINILSKLSHPHIINLIEAFYSDTNLYIFTEL 271
                 689***************************9999888777899******************999*********************************** PP

                 -TTEBHHHHHHHHSS.--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTE...EEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHH.... CS
     Pkinase  80 veggeladllerkgs.lseeeakkiakqilegleylHskgiiHrDlKpeNiLidekge...lKitDFGlakelesssk.ltsfvgtseYlAPEvl.... 169
                 ++ g+l++++e +g  ls+ + + i +q++ +++ylHsk+i+HrD+KpeN+Li ++g    + +tDFG+a+++++++  l s+ gt+ ++APEv     
  KHJ31908.1 272 APAGDLFSYIESHGGyLSDLHSRVISRQLVLAVKYLHSKRIVHRDIKPENVLIMQTGFgsrVVLTDFGFANNINTETGrLISRLGTEGFIAPEVEflnp 370
                 ***********776659999**********************************9999999*************99888**************977787 PP

                 TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGG CS
     Pkinase 170 keneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpy 263
                  +++y+ ++D+WslGv+ ++lltg+++ + e+ +   +   +q+ + ++ l+e ++  ++++++ ++a+  +k+ll+++p++R++a+e+l+hp+
  KHJ31908.1 371 FDKGYTLSADIWSLGVLTVCLLTGSTLIPREDVS---QLSRHQIANYFNALRE-NQIEKRWQSMRSTALLYIKSLLAMEPSHRMSASEALRHPW 460
                 78***************************55555...5666666668888866.6777999********************************9 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.8   0.0   2.2e-30     5e-27       4     252 ..     173     452 ..     170     458 .. 0.70

  Alignments for each domain:
  == domain 1  score: 94.8 bits;  conditional E-value: 2.2e-30
                  EEEEEEESSEEEEEEEEET............TTTSSEEEEEEEEEST...........TSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEE CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkg............ekekkevkVavKtlke...........eateeekeelleeakimkklkhpnivkllgvctkeeplli 78 
                  ++ lG+G++G V+ ++ +             +   k  + + Kt++            + + + k+ +l+e++i++kl+hp+i++l+ + +++ +l+i
   KHJ31908.1 173 DRVLGKGHYGAVFLAKDNLtsrqlvckvvelN---KAAEEITKTIQPdlvgqrwinniHRDGDGKKLVLREINILSKLSHPHIINLIEAFYSDTNLYI 267
                  57788888888888876665667777775441...2223333333322222222222233344478899***************************** PP

                  EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE...TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS- CS
  Pkinase_Tyr  79 vteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse...nkvvkisDfGLardiekddeyvkkeeaklpvkWma 173
                   te+++ GdL ++++++    l+  +   ++ q+  +++yL+sk++vHrd+   NvL+ +   ++ v ++DfG a++i  + e+ +  ++     ++a
   KHJ31908.1 268 FTELAPAGDLFSYIESH-GGYLSDLHSRVISRQLVLAVKYLHSKRIVHRDIKPENVLIMQtgfGSRVVLTDFGFANNI--NTETGRLISRLGTEGFIA 362
                  *****************.99999999999******************************9666679************..44444445555666799* PP

                  HHHHHHSE....EEHHHHHHHHHHHHHHHHTTSS.GT...TTTSHHHHHHHHH...HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--H CS
  Pkinase_Tyr 174 pEslkekk....ftsksDvWsfGvllwEiftlge.sp...ypglkneevlekl...kegkrlekpekcpeelyelmkkcweedpeeRptf 252
                  pE+ + +     +t ++D+Ws Gvl+  ++t +   p   +++l+ +++++++   +e++  ++ +++ ++    +k+ ++ +p++R + 
   KHJ31908.1 363 PEVEFLNPfdkgYTLSADIWSLGVLTVCLLTGSTlIPredVSQLSRHQIANYFnalRENQIEKRWQSMRSTALLYIKSLLAMEPSHRMSA 452
                  *99764444445****************99944333422244444445444441103333334444444444445666666777776665 PP

>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.6   0.2   1.5e-15   3.4e-12       2      68 ..      57     136 ..      56     137 .. 0.90

  Alignments for each domain:
  == domain 1  score: 46.6 bits;  conditional E-value: 1.5e-15
                 EEESS.TTSSEETTSTTSTTTEEEE...EEETT.....CEEEEEEEESSSSSEEETTEEEST....TSEEEE-TTEEEEE CS
         FHA   2 tiGRs.sdcdivlddpsiSrkHali...kfdkg.....sgkvyleDlgSknGtfvNgqrigk....gepveLksgdviel 68 
                  +GR+ s+c i++dd  iS+ H++i    ++++     ++ vy eDl S+nGt+vN++ igk     + + L++ d+iel
  KHJ31908.1  57 LVGRDaSQCEICIDDDYISKLHFRIysvIYEQNkksnlQPLVYCEDLESTNGTYVNDHCIGKigheRTGYLLSNEDIIEL 136
                 69***999*****************98744444678999******************999999999999*********98 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0   0.00095       2.1      10      50 ..     166     206 ..     158     223 .. 0.86
   2 !   21.8   0.0   4.5e-08    0.0001     141     239 ..     288     387 ..     254     412 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00095
  Kinase-like  10 rertlvrgellkkgdrsvvfevkdqetgeplavkvfllpse 50 
                  + r lv   +l+kg  ++vf++kd+ t  +l+ kv  l++ 
   KHJ31908.1 166 KDRFLVSDRVLGKGHYGAVFLAKDNLTSRQLVCKVVELNKA 206
                  57999*****************************9887654 PP

  == domain 2  score: 21.8 bits;  conditional E-value: 4.5e-08
  Kinase-like 141 letiarlllTlqlirlaanLqakglvhgkftvdnllldekg...glmlggftaLvragtk.vvl.seve.kgfaPpEllgsrggytrknktkmthkld 232
                  l ++   ++  ql+  + +L++k +vh +++++n+l ++ g   +++l++f+      t+ ++l s    +gf  pE++   + +       +t + d
   KHJ31908.1 288 LSDLHSRVISRQLVLAVKYLHSKRIVHRDIKPENVLIMQTGfgsRVVLTDFGFANNINTEtGRLiSRLGtEGFIAPEVEFL-NPF----DKGYTLSAD 380
                  555556677889999************************987778*****987766655414555777679**99999876.334....4589***** PP

  Kinase-like 233 aWqlGlv 239
                   W lG+ 
   KHJ31908.1 381 IWSLGVL 387
                  *****74 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   1.2e-08   2.7e-05     316     385 ..     301     365 ..     294     381 .. 0.86

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 1.2e-08
  Pkinase_fungal 316 IkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaiev 385
                     + + + L+  ++i+HrDi  +N+li+  ++  + + +L D+ +a ++++++       r GT  F+a ev
      KHJ31908.1 301 VLAVKYLH-SKRIVHRDIKPENVLIM--QTGFGSRVVLTDFGFANNINTETG--RLISRLGTEGFIAPEV 365
                     67788999.9****************..77889***************6443..4478********9776 PP

>> Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   3.6e-07   0.00081      15      67 ..      52     115 ..      46     136 .. 0.74

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 3.6e-07
                   TTEEEEEES-TT.-SEE---TTS-TT-EEEEE....ETTE......EEEEE-CESS--EETTEE CS
  Yop-YscD_cpl  15 eegevviGsded.cDivLsDkevsrkhlkLev....eees......vrledlgsrngllvnger 67 
                    ++ev++G+d + c+i ++D+ +s+ h++++     ++++      v  edl+s+ng++vn+  
    KHJ31908.1  52 PGKEVLVGRDASqCEICIDDDYISKLHFRIYSviyeQNKKsnlqplVYCEDLESTNGTYVNDHC 115
                   5789******999***************997522222222233333567899999999999875 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   4.6e-07     0.001      95     167 ..     267     339 ..     260     350 .. 0.88

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 4.6e-07
         Kdo  95 lterlegaqdLedllakwae.laeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDld 167
                 +  +l++a dL  +++++   l++   r + +++  +++ lh+  + H+d+ + n+l+ q++  + +++l D+ 
  KHJ31908.1 267 IFTELAPAGDLFSYIESHGGyLSDLHSRVISRQLVLAVKYLHSKRIVHRDIKPENVLIMQTG-FGSRVVLTDFG 339
                 55689***********9888777777888899**************************9998.89999999995 PP

>> Rsd_AlgQ  Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   4.7e-05       0.1      63      88 ..      72      97 ..      61     106 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.7e-05
    Rsd_AlgQ 63 DYvSaGhFevYeqlveeaeefgdkel 88
                DY+S+ hF +Y  + e++++++ + l
  KHJ31908.1 72 DYISKLHFRIYSVIYEQNKKSNLQPL 97
                7****************999887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3786.30
//
Query:       KHJ31909.1  [L=587]
Description: putative serine threonine-protein kinase chk2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.6e-77  258.7   0.0    8.3e-77  258.1   0.0    1.3  1  Pkinase         Protein kinase domain
    3.8e-37  128.0   0.0    5.4e-37  127.5   0.0    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
    3.6e-15   56.1   0.1    8.4e-15   54.9   0.1    1.7  1  FHA             FHA domain
    2.2e-09   37.1   0.0    5.7e-09   35.7   0.0    1.7  2  Kinase-like     Kinase-like
    1.6e-05   25.1   0.0    3.7e-05   24.0   0.0    1.5  1  Yop-YscD_cpl    Inner membrane component of T3SS, cytoplasmic
    0.00021   20.2   1.0    0.00031   19.6   0.0    1.7  2  Pkinase_fungal  Fungal protein kinase
    0.00044   19.9   0.2       0.21   11.2   0.1    2.5  2  FTA2            Kinetochore Sim4 complex subunit FTA2
     0.0059   16.0   0.0      0.013   14.9   0.0    1.5  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
       0.11   12.6   0.1       0.95    9.6   0.0    2.3  2  UvrA_inter      UvrA interaction domain


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  258.1   0.0   4.2e-80   8.3e-77       1     264 []     266     528 ..     266     528 .. 0.94

  Alignments for each domain:
  == domain 1  score: 258.1 bits;  conditional E-value: 4.2e-80
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                 y  leklG+G +++V+k+v+k tg+++AvK++++++++++ + ++ +Ei il  l+hpni+rl+++fee++++yl+le++ +gel++++ +k +l+e+e
  KHJ31909.1 266 YDLLEKLGKGHYAEVFKCVKKLTGCEYAVKIFNVQHDESDIN-SLKQEIGILMGLSHPNILRLIGAFEEPNSIYLLLELACEGELFKWIVEKEKLTEKE 363
                 67789*******************************999885.9******************************************************* PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH...TTSCBSHHHHHHHHHHHHHHHHHSS CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLid.ekgelKitDFGlakelessskltsfvgtseYlAPEvl...keneyskkvDvWslGvilyelltgk 194
                 +++i+ q+++g++ylH++gi HrD+KpeNiL+  ++  +K++DFGlak + ++s +ts +gt+ Y+APE+l   ++++y ++vD+W+lGv+ly  l+g 
  KHJ31909.1 364 TRSIFIQLFQGVKYLHDRGIAHRDIKPENILLMnRTPTIKLGDFGLAKIVGEESFTTSLCGTPCYVAPEILedsDNRRYNRAVDIWALGVVLYICLCGF 462
                 *********************************66777*********************************88777999******************** PP

                 -STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 195 ppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 ppfs+e +++++   l q    +ki g+ ++ +p +++i ++a+dl++k+l++d +kR+ ++++l+hp+l
  KHJ31909.1 463 PPFSDELTSKDYPYTLVQ---QIKI-GQFDFPSPYWDNIGDSALDLIDKMLTVDVNKRINIDQCLEHPWL 528
                 ****77777766666666...3443.5889***************************************7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.5   0.0   2.7e-40   5.4e-37       3     256 ..     268     523 ..     266     525 .. 0.81

  Alignments for each domain:
  == domain 1  score: 127.5 bits;  conditional E-value: 2.7e-40
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekl 100
                  l +klG+G++++V+++  k     + ++ avK+++ +++e++ ++l +e+ i++ l+hpni++l+g+  + +++++++e++++G+L k + +k  ekl
   KHJ31909.1 268 LLEKLGKGHYAEVFKCVKK----LTGCEYAVKIFNVQHDESDINSLKQEIGILMGLSHPNILRLIGAFEEPNSIYLLLELACEGELFKWIVEK--EKL 359
                  6799************999....999*****************************************************************98..9** PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE...EEHHHHHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk...ftsksDvWsfGvl 194
                  t k++ s+ +q+ +G++yL+++ + Hrd+   N+Ll + + ++k++DfGLa+ +    e + +++      ++apE+l+++    ++ + D+W+ Gv+
   KHJ31909.1 360 TEKETRSIFIQLFQGVKYLHDRGIAHRDIKPENILLMNrTPTIKLGDFGLAKIV---GEESFTTSLCGTPCYVAPEILEDSDnrrYNRAVDIWALGVV 454
                  **********************************9987256***********99...333334455556689******9877777************* PP

                  HHHHHTTSSGTTTTS.HHHH....HHHHHHTTEE.S-BB..TTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 195 lwEiftlgespypgl.knee....vleklkegkr.lekp..ekcpeelyelmkkcweedpeeRptfselv 256
                  l+ i+  g  p+++  ++++    +++++k g+   + p  +++ ++  +l+ k ++ d ++R ++ +++
   KHJ31909.1 455 LY-ICLCGFPPFSDElTSKDypytLVQQIKIGQFdFPSPywDNIGDSALDLIDKMLTVDVNKRINIDQCL 523
                  **.5556999987653444433334555543332222222245556666677777777777777766665 PP

>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.9   0.1   4.2e-18   8.4e-15       1      68 [.     175     243 ..     175     244 .. 0.93

  Alignments for each domain:
  == domain 1  score: 54.9 bits;  conditional E-value: 4.2e-18
                 EEEESSTTSSEETTSTTSTTTEEEE..EEETTCEEEEEEEESSSSSEEETTEEESTTSEEEE-TTEEEEE CS
         FHA   1 vtiGRssdcdivlddpsiSrkHali..kfdkgsgkvyleDlgSknGtfvNgqrigkgepveLksgdviel 68 
                 + iGR+ +cd+v++dp iS +Ha+i  + ++g+    +eDl S+nGtfvN+  igk+++ eL++ d+i +
  KHJ31909.1 175 YLIGRHLECDFVIEDPLISNRHAIIftELREGHVVAVIEDL-SSNGTFVNEGIIGKNKRRELHDFDEIAI 243
                 78***********************775666689999***9.9************************986 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.5     5e+03      20      55 ..     272     305 ..     264     312 .. 0.77
   2 !   35.7   0.0   2.9e-12   5.7e-09     138     287 ..     357     515 ..     341     516 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.5
  Kinase-like  20 lkkgdrsvvfevkdqetgeplavkvfllpseaskkd 55 
                  l+kg    vf+   + tg + avk+f ++ + s  d
   KHJ31909.1 272 LGKGHYAEVFKCVKKLTGCEYAVKIFNVQHDES--D 305
                  777888889999999999999999999998766..3 PP

  == domain 2  score: 35.7 bits;  conditional E-value: 2.9e-12
  Kinase-like 138 hkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgg.lmlggftaLvragtkvvlseve..kgfaPpEllgsrggytrknktkmthkld 232
                  +k  e+  r +  +ql + + +L+++g+ h +++++n+ll+++ + ++lg+f+    +g++    + +    +  pE+l          + ++  ++d
   KHJ31909.1 357 EKLTEKETRSIF-IQLFQGVKYLHDRGIAHRDIKPENILLMNRTPtIKLGDFGLAKIVGEESFTTSLCgtPCYVAPEILED------SDNRRYNRAVD 447
                  444455566666.9***************************9986489*****9999999999877775677999999988......356788899** PP

  Kinase-like 233 aWqlGlviyriwclklPltlateeakeew.............kfklck..kipekvkaLlkkfLqlsqed 287
                   W+lG+v y   c   P+    e+ ++++             +f      +i++    L+ k+L +++++
   KHJ31909.1 448 IWALGVVLYICLCGFPPFSD--ELTSKDYpytlvqqikigqfDFPSPYwdNIGDSALDLIDKMLTVDVNK 515
                  ************99888865..445555522444444444334433222366666666666666666665 PP

>> Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   1.8e-08   3.7e-05      17      69 ..     173     228 ..     168     243 .. 0.77

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 1.8e-08
                   EEEEEES-TT-SEE---TTS-TT-EEEEEE...TTEEEEEE-CESS--EETTEE-S CS
  Yop-YscD_cpl  17 gevviGsdedcDivLsDkevsrkhlkLeve...eesvrledlgsrngllvngerve 69 
                   + ++iG++ +cD v++D+ +s++h+ + +e      v + +  s ng++vn+  + 
    KHJ31909.1 173 NGYLIGRHLECDFVIEDPLISNRHAIIFTElreGHVVAVIEDLSSNGTFVNEGIIG 228
                   679***********************9776432555677789999*****986554 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   1.9       1.7   3.4e+03     218     248 ..      14      73 ..       3     120 .. 0.48
   2 !   19.6   0.0   1.6e-07   0.00031     312     390 ..     368     438 ..     356     460 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.7
  Pkinase_fungal 218 iaeiRkgldvtkaekfrskrkvvsssssqe.............................l 248
                      ++ R++ d ++ e+++s +k+ s++s ++                             +
      KHJ31909.1  14 LKRNRDNADNEDSEEIDSFKKSCSETSLTHsqklpviqasqllspitsqeksfsseileQ 73 
                     445555555555555555555555544444445555444333223322222222222221 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 1.6e-07
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgee 390
                     +++  +g + L+ + gi HrDi  +Nil++    +++++  L D+ lak ++++   s      GT+ ++a e+l++++
      KHJ31909.1 368 FIQLFQGVKYLH-DRGIAHRDIKPENILLM----NRTPTIKLGDFGLAKIVGEE---SFTTSLCGTPCYVAPEILEDSD 438
                     55556788999*.*****************....889***************74...444569************9754 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.1   0.00011      0.21      22      60 ..     264     304 ..     256     315 .. 0.81
   2 !    5.9   0.0    0.0043       8.6     169     204 ..     359     394 ..     350     409 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00011
        FTA2  22 kdiefleyLgkglhsiVlkv..kirgkeYALKlFrfleaee 60 
                 +d+++le Lgkg  + V+k   k  g eYA+K+F  +++e+
  KHJ31909.1 264 QDYDLLEKLGKGHYAEVFKCvkKLTGCEYAVKIFNVQHDES 304
                 7899***************75577888*******9886654 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0043
        FTA2 169 eqeelevsqlpkllrdlkklhklgIvvrDlkeenyi 204
                   e+ + s++ +l + +k lh  gI +rD+k+en++
  KHJ31909.1 359 LTEKETRSIFIQLFQGVKYLHDRGIAHRDIKPENIL 394
                 45566678889999******************9975 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   6.3e-06     0.013     104     155 ..     348     399 ..     335     409 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 6.3e-06
         Kdo 104 dLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqee 155
                 +L +++ + ++l e+ +r ++ ++ + ++ lh++g+ H+d+ + nill ++ 
  KHJ31909.1 348 ELFKWIVEKEKLTEKETRSIFIQLFQGVKYLHDRGIAHRDIKPENILLMNRT 399
                 567788877779999********************************98765 PP

>> UvrA_inter  UvrA interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       0.7   1.4e+03      17      39 ..      51      73 ..      40      76 .. 0.79
   2 ?    9.6   0.0   0.00048      0.95      31      71 ..     538     578 ..     533     582 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.7
  UvrA_inter 17 tkllilaPvvrerkgefkkllen 39
                +  ++l+P+++++k   +++le+
  KHJ31909.1 51 QASQLLSPITSQEKSFSSEILEQ 73
                56789*********888888775 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00048
  UvrA_inter  31 gefkkllenlkkkGfvrvriDgeiydldedieldknkkhsi 71 
                 g+++++l++l + Gf++ ri++e + l++  +++ +++ s+
  KHJ31909.1 538 GDYSEVLDELAQLGFSKRRINRERTLLTKTYSIKITENSSL 578
                 89*********************999999766666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (587 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       651  (0.0363099); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3948.60
//
Query:       KHJ31910.1  [L=390]
Description: putative 26s protease regulatory subunit s10b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.2e-43  146.9   0.0    7.5e-43  146.1   0.0    1.4  1  AAA              ATPase family associated with various cellul
    5.5e-12   45.4   0.1    8.6e-11   41.6   0.0    2.3  2  Prot_ATP_ID_OB   Proteasomal ATPase OB C-terminal domain
    1.7e-10   40.6   0.2    5.2e-10   39.0   0.1    1.9  2  AAA_lid_3        AAA+ lid domain
    5.3e-08   33.4   0.0    3.2e-05   24.4   0.0    2.9  3  AAA_16           AAA ATPase domain
    5.5e-06   26.4   0.1    0.00012   22.1   0.1    2.6  1  AAA_5            AAA domain (dynein-related subfamily)
    1.1e-05   25.3   0.0    2.3e-05   24.2   0.0    1.5  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    1.6e-05   25.1   0.0      6e-05   23.2   0.0    2.0  1  AAA_2            AAA domain (Cdc48 subfamily)
     0.0001   22.6   0.1     0.0059   16.9   0.0    2.4  2  AAA_22           AAA domain
    0.00078   20.0   0.2     0.0044   17.6   0.0    2.4  2  AAA_18           AAA domain
     0.0012   18.1   0.0     0.0022   17.2   0.0    1.4  1  DUF815           Protein of unknown function (DUF815)
     0.0021   17.3   0.0      0.004   16.4   0.0    1.4  1  TIP49            TIP49 P-loop domain
     0.0032   17.0   0.0     0.0061   16.1   0.0    1.5  1  AAA_7            P-loop containing dynein motor region
     0.0033   17.4   0.0     0.0069   16.4   0.0    1.5  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
     0.0034   17.2   0.1       0.01   15.6   0.0    1.8  2  IstB_IS21        IstB-like ATP binding protein
     0.0046   17.1   0.0      0.012   15.8   0.0    1.8  1  AAA_33           AAA domain
      0.005   16.5   0.0      0.015   15.0   0.0    1.7  1  Prot_ATP_OB_N    Proteasomal ATPase OB N-terminal domain
     0.0052   16.2   0.0     0.0099   15.3   0.0    1.4  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
     0.0067   16.8   0.0      0.013   15.9   0.0    1.5  1  RNA_helicase     RNA helicase
     0.0089   15.8   0.0      0.025   14.3   0.0    1.8  1  Sigma54_activat  Sigma-54 interaction domain
  ------ inclusion threshold ------
      0.013   15.4   0.0      0.029   14.2   0.0    1.6  1  AAA_3            ATPase family associated with various cellul
      0.016   15.3   0.0      0.038   14.0   0.0    1.6  1  AAA_14           AAA domain
      0.023   14.4   0.0      0.059   13.1   0.0    1.7  1  AAA_24           AAA domain
      0.029   14.1   0.0      0.086   12.6   0.0    1.8  2  AAA_30           AAA domain
       0.05   12.9   1.1       0.14   11.5   0.0    2.2  3  ATPase           KaiC
      0.054   13.4   0.1       0.15   12.0   0.0    1.7  2  NACHT            NACHT domain
      0.058   13.2   0.4       0.31   10.8   0.0    2.1  2  AAA_11           AAA domain
      0.066   12.7   0.0       0.12   11.8   0.0    1.3  1  PhoH             PhoH-like protein
      0.078   12.6   0.0        4.2    7.0   0.0    2.4  2  Thymidylate_kin  Thymidylate kinase
       0.09   13.0   0.0       0.16   12.2   0.0    1.5  1  AAA_28           AAA domain
      0.095   12.3   0.1       0.24   11.0   0.1    1.6  1  AAA_25           AAA domain
      0.098   11.9   0.0       0.21   10.9   0.0    1.5  1  Zeta_toxin       Zeta toxin
       0.13   11.3   0.0       0.23   10.5   0.0    1.3  1  Parvo_NS1        Parvovirus non-structural protein NS1
       0.15   12.4   0.0       0.23   11.8   0.0    1.6  1  AAA_19           AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.1   0.0   1.4e-45   7.5e-43       1     132 []     171     304 ..     171     304 .. 0.96

  Alignments for each domain:
  == domain 1  score: 146.1 bits;  conditional E-value: 1.4e-45
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH...TTCCCHHHHHHHHHHHHHHHHT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgv 96 
                 vllyGppGtGKTlla+ava++l+++fl++  s +++ky+ges++ ire+f  ake+a p+i+f+DEida++++r    +s+++e +r++ +Ll++ldg+
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHA-PCIIFMDEIDAIGGRRfseGTSADREIQRTLMELLNQLDGF 268
                 79******************************************************9.****************986666888889************* PP

                 TTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETTS CS
         AAA  97 kkkeskvivigatnrpdkldpallr.gRfdrkieiel 132
                 +   +++ +i+atnrpd+ldpallr gR+drkiei+l
  KHJ31910.1 269 DYL-GQTKIIMATNRPDTLDPALLRaGRLDRKIEIPL 304
                 **7.56****************************985 PP

>> Prot_ATP_ID_OB  Proteasomal ATPase OB C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.0   1.6e-13   8.6e-11       1      57 []      58     113 ..      58     113 .. 0.97
   2 ?    1.2   0.0      0.67   3.7e+02       6      38 ..     312     345 ..     308     346 .. 0.78

  Alignments for each domain:
  == domain 1  score: 41.6 bits;  conditional E-value: 1.6e-13
                     EEEEEEE-TTSSEEEEE-TTS-EEEEEE-GGGSSST--TTEEEEEETTTTEEEEEE- CS
  Prot_ATP_ID_OB   1 VatVsEvlddteraiVktssdeevvvslagavpremLrpgDlVavdkdtgfifEkLP 57 
                     +++V + ldd er iVk ss+  +vv + ++v+++ L++g++Va+d +t  i+  LP
      KHJ31910.1  58 IGEVLKQLDD-ERFIVKASSGPRYVVGCRSKVDKAALKQGTRVALDMTTLTIMRMLP 113
                     7899999***.******************************************9999 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.67
                     EE-TTSSEEEEE-TT..S-EEEEEE-GGGSSST-- CS
  Prot_ATP_ID_OB   6 EvlddteraiVktss..deevvvslagavpremLr 38 
                     E++ + + a V+t++  d e+vv++++ ++ ++Lr
      KHJ31910.1 312 EIMKI-HAAGVVTEGeiDFESVVKMSDGLNGADLR 345
                     66667.6666777554478**********999998 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       7.3     4e+03      25      37 ..      24      36 ..      24      43 .. 0.78
   2 !   39.0   0.1   9.5e-13   5.2e-10       2      45 .]     327     370 ..     326     370 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 7.3
   AAA_lid_3 25 eAallAlrrgike 37
                eA l Alr +ik+
  KHJ31910.1 24 EAKLKALRLDIKK 36
                8999999987776 PP

  == domain 2  score: 39.0 bits;  conditional E-value: 9.5e-13
   AAA_lid_3   2 vdlkeLAerTeGySGADlaalcreAallAlrrgikeitmedfee 45 
                 +d++ ++++++G  GADl +++ eA+llA+++ +++++++df++
  KHJ31910.1 327 IDFESVVKMSDGLNGADLRNIVTEAGLLAIKDYRDAVKQDDFNK 370
                 8*****************************************86 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0       2.5   1.4e+03      56      88 ..      37      68 ..       5     120 .. 0.60
   2 !   24.4   0.0   5.8e-08   3.2e-05      15      51 ..     159     195 ..     157     208 .. 0.86
   3 ?    5.1   0.0     0.049        27     121     163 ..     214     263 ..     200     271 .. 0.74

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 2.5
      AAA_16 56 lrgkcdqlesaipysa.laqalareellrqllde 88
                l+ ++d+ e++i  ++ + q++   e+l+ql+de
  KHJ31910.1 37 LQKDYDDTEENIKALQsVGQII-G-EVLKQLDDE 68
                3444455555555545344444.5.566666665 PP

  == domain 2  score: 24.4 bits;  conditional E-value: 5.8e-08
      AAA_16  15 alervrsgrpelvllsGesGvGKsslvrellralekd 51 
                 +++rv    p  vll+G++G+GK+ l+r+++ +le++
  KHJ31910.1 159 LFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETN 195
                 67788888889********************999987 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.049
      AAA_16 121 ellkrllallsrderplvlvlDdlq........wadeaslqllaaLlrlle 163
                 +l+++++ ++++ + p ++++D+++           +a++++ ++L++ll+
  KHJ31910.1 214 RLIREMFGYAKE-HAPCIIFMDEIDaiggrrfsEGTSADREIQRTLMELLN 263
                 678888899999.888*********88887655333355555555555544 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.1   2.2e-07   0.00012       1     135 [.     170     291 ..     170     293 .. 0.69

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 2.2e-07
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..- CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.egeilvlDEveraesevlnsLlslleerrlllee 98 
                 +vlL GppGtgK+ la+ +a+ l+++++ v  ++      ++ ++   ++ ++l    +  a +  ++i+++DE++ +    +++  s   e ++ l+e
  KHJ31910.1 170 GVLLYGPPGTGKTLLARAVASSLETNFLKVVSSA------IVDKYI--GESARLIREMFGYAKEhAPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 260
                 59*********************99999887666......555555..344444555555444456778888888877777777777777777777777 PP

                 SSSEEE---......-EEEEEESS--.-TT-TTHHHH CS
       AAA_5  99 ggelvkaknddllerfrviatanpldrslnelspalr 135
                 + ++ +   +  l ++ +i+++n++d     l+pal+
  KHJ31910.1 261 LLNQLDGFDY--LGQTKIIMATNRPD----TLDPALL 291
                 6666655444..44577777777777....6666665 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   4.2e-08   2.3e-05      35      94 ..     170     237 ..     162     243 .. 0.74

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 4.2e-08
      RuvB_N  35 hvllyGpPGlGkttlakiiakelgvk.lkitsgPvleka.gdlaalltnl....eekd..vlfideih 94 
                  vllyGpPG Gkt la+ +a+ l+++ lk+ s+ +++k  g+ a l+ ++    +e+   ++f+dei 
  KHJ31910.1 170 GVLLYGPPGTGKTLLARAVASSLETNfLKVVSSAIVDKYiGESARLIREMfgyaKEHApcIIFMDEID 237
                 69**********************99458899999988536666666665333222213378888875 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   1.1e-07     6e-05       6     104 ..     171     263 ..     166     277 .. 0.81

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 1.1e-07
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTSEEEEETGGG-------------HHHHHHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEidKihpkessgadvSregVqrdLLqile 104
                 +ll gp g+Gkt+la+a+a+ l+     ++  +  s++    +     +rli +  gy +     i+++DEid i  ++ s+      ++qr L+ +l 
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSLET----NFLKVVSSAIVD--KYIGESARLIREMFGYAKEHAPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 263
                 6899******************95....677666666666..33334478888888999999999************755555555679***9999986 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   1.1e-05    0.0059       8      30 ..     171     193 ..     166     208 .. 0.88
   2 ?    3.6   0.0      0.14        73      69     117 ..     209     263 ..     193     282 .. 0.64

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1.1e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleqld 30 
                 ++++G++GtGKT+l+r ++++l+
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSLE 193
                 689****************9985 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.14
      AAA_22  69 kaerlsseellealeqalraravielliiDEaqhlr....s.........eealeeLrslln 117
                  +   +s +l++ +  +++++a   ++  DE++ +     s         +   ++L +lln
  KHJ31910.1 209 IG---ESARLIREMFGYAKEHAP-CIIFMDEIDAIGgrrfSegtsadreiQ---RTLMELLN 263
                 44...788899999999999999.**********97765515556774441...33333333 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0         9   4.9e+03      43      80 ..      23      59 ..      12      94 .. 0.62
   2 !   17.6   0.0   8.1e-06    0.0044       1      67 [.     171     265 ..     171     290 .. 0.66

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 9
      AAA_18 43 pealdeskrldedkldklldaleenssaleegknlvid 80
                +ea  + +rld++kl+k  d  een++al++ +  +i 
  KHJ31910.1 23 WEAKLKALRLDIKKLQKDYDDTEENIKALQSVGQ-IIG 59
                4444666677777777776766776665555555.333 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 8.1e-06
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf....................gvnlrdvakenglllevdpe.......aldeskrldedkldklldaleen 67 
                 +ll G+pG+GKt la++++++l  +                     ++   +ake+ +++ + +e        ++e   +d++ +  l+++l++ 
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSLeTNflkvvssaivdkyigesarlIREMFGYAKEHAPCIIFMDEidaiggrRFSEGTSADREIQRTLMELLNQL 265
                 799***************99984335877776666666655555544444445555544444444555566666666666666666666666665 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   4.1e-06    0.0022      51     116 ..     166     236 ..     126     254 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 4.1e-06
      DUF815  51 lpannvLLwGarGtGKSslvkallneyaeegLrlie..vekedlkelpklvellr...erperfilfvDDL 116
                 +p + vLL+G  GtGK  l +a+ ++++++ L+++   +  + + e  +l++++    +++  +i+f+D +
  KHJ31910.1 166 KPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVSsaIVDKYIGESARLIREMFgyaKEHAPCIIFMDEI 236
                 67789******************************644777888888888887753336667799999975 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   7.3e-06     0.004      51      92 ..     169     208 ..     158     220 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 7.3e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevysle 92 
                 ++vLl Gp+gtGkt la a++ +l   + f ++++s +    
  KHJ31910.1 169 KGVLLYGPPGTGKTLLARAVASSLE--TNFLKVVSSAIVDKY 208
                 89*********************97..789999998886655 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.1e-05    0.0061      31     109 ..     166     236 ..     158     260 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.1e-05
       AAA_7  31 knkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiiesklekrrkgvygPpggkklvvFvDDl 109
                 k  k vll+Gp GtGKt++++ + ++l+         nf +  s++ + + i ++    r+    ++ +  +++F+D++
  KHJ31910.1 166 KPPKGVLLYGPPGTGKTLLARAVASSLE--------TNFLKVVSSAIVDKYIGESARLIREMFGYAKEHAPCIIFMDEI 236
                 55688*******************9999........5666666666666666666666665444455666666666665 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.3e-05    0.0069      20      59 ..     169     208 ..     141     218 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.3e-05
                 EEEEEEESTTSSHHHHHHHHHHHTT--..----TTTTSEEEE CS
        TsaE  20 dvilLeGdLGaGKTtlvrglakalgve..evkSPTFtlveeY 59 
                 + +lL+G+ G+GKT l+r++a++l+ +  +v S   ++v +Y
  KHJ31910.1 169 KGVLLYGPPGTGKTLLARAVASSLETNflKVVSS--AIVDKY 208
                 449*********************9997876664..466666 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       6.2   3.4e+03      15      50 ..      14      48 ..       4      55 .. 0.70
   2 !   15.6   0.0   1.9e-05      0.01      47      78 ..     168     199 ..     156     208 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 6.2
   IstB_IS21 15 aqktledidfraarsldkrkvkeLatlsfiekkeni 50
                  k le+ +++a+ ++ +  +k+L+  ++ +++eni
  KHJ31910.1 14 RDKLLESREWEAKLKALRLDIKKLQ-KDYDDTEENI 48
                5678888888888888888888875.4566666665 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 1.9e-05
   IstB_IS21  47 kenivllGpsGvGKshlaialgveavraglsv 78 
                  ++++l Gp+G+GK+ la a++ +  ++ l+v
  KHJ31910.1 168 PKGVLLYGPPGTGKTLLARAVASSLETNFLKV 199
                 57899****************98876665555 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   2.2e-05     0.012       2      42 ..     171     224 ..     171     281 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 2.2e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg...avllssdt..........lrrrlfgtdq 42 
                 vll G+pG+GK+ la+ ++  l      ++ss +          l+r +fg  +
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSLEtnfLKVVSSAIvdkyigesarLIREMFGYAK 224
                 7899***************99996544444444466666666666666666554 PP

>> Prot_ATP_OB_N  Proteasomal ATPase OB N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   2.7e-05     0.015      11      46 ..      67     102 ..      57     104 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.7e-05
  Prot_ATP_OB_N  11 qdgtadVlvggrrmrVavsPlvdaeeLrpGqeVlLn 46 
                    +++ +   ++g r++V    +vd + L+ G++V L+
     KHJ31910.1  67 DERFIVKASSGPRYVVGCRSKVDKAALKQGTRVALD 102
                    5667777899***********************996 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.8e-05    0.0099      25      45 ..     171     191 ..     162     211 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.8e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrlpsl 45 
                   +ll+GppG+GKt+la++++s 
    KHJ31910.1 171 VLLYGPPGTGKTLLARAVASS 191
                   89**************98765 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   2.4e-05     0.013       1      26 [.     171     196 ..     171     239 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 2.4e-05
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   ++lyGp+g+GK++la+ +a++l++++
    KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSLETNF 196
                   689**************999888665 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   4.5e-05     0.025      23      75 ..     169     224 ..     158     282 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 4.5e-05
                      S-EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS......-TTCHHHHHHEBSS CS
  Sigma54_activat  23 lsvlitGesGtGKellaraiheaskrkekpfvavncaai......peelleseLFGhek 75 
                        vl+ G  GtGK+llara+ ++ +    +f++v  +ai      ++  l  e+FG++k
       KHJ31910.1 169 KGVLLYGPPGTGKTLLARAVASSLET---NFLKVVSSAIvdkyigESARLIREMFGYAK 224
                      679****************9876664...455555555421123333345567888876 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   5.4e-05     0.029       2      30 ..     171     199 ..     170     210 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.4e-05
       AAA_3   2 vllegvPGlaktllvkalakaldlefkri 30 
                 vll g PG++ktll++a+a++l+++f ++
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSLETNFLKV 199
                 7999*********************9887 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0     7e-05     0.038       5      76 ..     171     239 ..     168     271 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 7e-05
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 +++ G+  +GKT l++ ++++l     ++l +      dk + ++++l+++++  +ke+   ++f+DEi  +
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSLE---TNFLKVVSSAIVDKYIGESARLIREMFGYAKEHAPCIIFMDEIDAI 239
                 7899**************98888...8888888888777777766545555555445567788******987 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   0.00011     0.059       5      26 ..     171     191 ..     168     256 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00011
      AAA_24   5 iliyGpsgiGKTtlakelgpkp 26 
                 +l+yGp+g+GKT la+    + 
  KHJ31910.1 171 VLLYGPPGTGKTLLARAV-ASS 191
                 89************9987.444 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00016     0.086      21      53 ..     171     203 ..     158     222 .. 0.87
   2 ?   -2.8   0.0       8.1   4.4e+03      93     110 ..     347     364 ..     335     382 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00016
      AAA_30  21 avltGpAGtGKttalkalreaweaaggrviglA 53 
                 ++l Gp+GtGKt + +a++  +e++  +v+  A
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSLETNFLKVVSSA 203
                 6789****************9999988888766 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 8.1
      AAA_30  93 ivDEagmvdtkqlaallk 110
                 iv Eag++++k+ ++ +k
  KHJ31910.1 347 IVTEAGLLAIKDYRDAVK 364
                 455555555555544443 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       5.4   2.9e+03      82     121 ..      28      68 ..      18      73 .. 0.45
   2 ?   11.5   0.0   0.00026      0.14      13      37 ..     158     186 ..     134     191 .. 0.74
   3 ?   -1.7   0.0       2.8   1.5e+03     125     154 ..     236     265 ..     206     283 .. 0.57

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 5.4
      ATPase  82 klaiidasesaeesaee.kdkedleelieelaeaikeikak 121
                 k   +d+ + ++++    ++ ++l+++ + + e++k++  +
  KHJ31910.1  28 KALRLDIKKLQKDYDDTeENIKALQSVGQIIGEVLKQLDDE 68 
                 33444444433333222234444444445555555555555 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00026
      ATPase  13 k....gGipegrvvlitGepGtGKtifal 37 
                 +     Gi   + vl++G pGtGKt++a 
  KHJ31910.1 158 ElfqrVGIKPPKGVLLYGPPGTGKTLLAR 186
                 0444479999999*************985 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 2.8
      ATPase 125 iDsitglayeekeavaReilrqlvrvlkkl 154
                 iD i+g   +e ++  Rei r+l++ l++l
  KHJ31910.1 236 IDAIGGRRFSEGTSADREIQRTLMELLNQL 265
                 444444433333444444444444444443 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00027      0.15       3      27 ..     171     195 ..     169     204 .. 0.89
   2 ?   -2.4   0.0       7.1   3.9e+03      87      95 ..     265     273 ..     234     286 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00027
                 EEEEC-TTTCHHHHHHHHHHHHCTS CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaeg 27 
                 v+l G++G GKT L++ +a+ + ++
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSLETN 195
                 799****************998765 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 7.1
                 EE-STT-SS CS
       NACHT  87 lDglDelvt 95 
                 lDg+D+l +
  KHJ31910.1 265 LDGFDYLGQ 273
                 677777765 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.3       1.4   7.6e+02     159     189 ..      19      49 ..       5      69 .. 0.79
   2 ?   10.8   0.0   0.00057      0.31      20      42 ..     171     193 ..     156     228 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.4
      AAA_11 159 skskleqerrklkkerkelskeleeaeesle 189
                 +++++e+++++l+  +k+l+k+++ +ee+++
  KHJ31910.1  19 ESREWEAKLKALRLDIKKLQKDYDDTEENIK 49 
                 5678888899999999999999999998886 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00057
      AAA_11  20 tliqGPPGtgKTktivellsqll 42 
                 +l+ GPPGtgKT    ++ s+l 
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSLE 193
                 799*********98888888873 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00022      0.12      22      43 ..     171     192 ..     163     211 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00022
                 EEEE--TTSSTTHHHHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavalavea 43 
                 v   Gp GtGKt+la a+a ++
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSL 192
                 6789***********9998654 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.12        63     139     177 ..      38      77 ..      22      82 .. 0.80
   2 ?    7.0   0.0    0.0077       4.2       3      30 ..     175     202 ..     173     236 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.12
                      SSTTTSHHHHHHHHHHHHHHHHHHHH.TTSTEEEEETTS- CS
  Thymidylate_kin 139 deldeeeeeqldflrkvrerylelak.ederiliidasks 177
                      ++ +++ ee+++ l++v +   e++k  d++ +i++as+ 
       KHJ31910.1  38 QKDYDDTEENIKALQSVGQIIGEVLKqLDDERFIVKASSG 77 
                      3357999********************9999999999875 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0077
                      ESTTSSHHHHHHHHHHHHHHTTE.EEEE CS
  Thymidylate_kin   3 GlDGaGKttqaellkerlkeegikvvlt 30 
                      G  G+GKt  a+++++ l+++ +kvv +
       KHJ31910.1 175 GPPGTGKTLLARAVASSLETNFLKVVSS 202
                      6679*******************96654 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0    0.0003      0.16       2      25 ..     171     195 ..     170     244 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.0003
      AAA_28   2 ivitGgestGKTtlleaLaar.gyp 25 
                 + + G+++tGKT l++a a+  +++
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSlETN 195
                 6799**************9654333 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   0.00043      0.24      36      56 ..     171     191 ..     164     200 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00043
      AAA_25  36 allaGapgtGKttlaldlala 56 
                 +ll+G+pgtGKt la  +a +
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASS 191
                 69************9888876 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00038      0.21      14      47 ..     166     197 ..     156     203 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00038
  Zeta_toxin  14 erPklillgGqpGAGKselaellkdelerqgnvv 47 
                 + Pk +ll G pG GK+ la++++ +l  + n++
  KHJ31910.1 166 KPPKGVLLYGPPGTGKTLLARAVASSL--ETNFL 197
                 56999********************99..56655 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00042      0.23     117     138 ..     171     192 ..     165     199 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00042
   Parvo_NS1 117 vwfyGpantGktnlaeaIakav 138
                 v++yGp+ tGkt la+a a  +
  KHJ31910.1 171 VLLYGPPGTGKTLLARAVASSL 192
                 89***************99876 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00042      0.23      11      38 ..     169     196 ..     161     379 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00042
      AAA_19  11 kvllvtaGpGtGKTrvlkhivallvelg 38 
                 k +l+ ++pGtGKT + +++ + l+ + 
  KHJ31910.1 169 KGVLLYGPPGTGKTLLARAVASSLETNF 196
                 6689**********98877777666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       974  (0.0543254); expected 358.6 (0.02)
Passed bias filter:                      808  (0.0450667); expected 358.6 (0.02)
Passed Vit filter:                       137  (0.00764125); expected 17.9 (0.001)
Passed Fwd filter:                        33  (0.00184059); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              33  [number of targets reported over threshold]
# CPU time: 0.63u 0.31s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 2567.33
//
Query:       KHJ31911.1  [L=1107]
Description: putative arf gtpase activator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.8e-32  110.0   0.8    1.7e-31  108.7   0.0    2.1  2  ArfGap       Putative GTPase activating protein for Arf
    9.8e-19   68.0  16.7    1.7e-18   67.2  16.7    1.3  1  BAR_3        BAR domain of APPL family
    6.2e-11   42.8   0.5    3.7e-10   40.3   0.1    2.6  2  PH           PH domain
  ------ inclusion threshold ------
       0.18   12.0   4.6       0.57   10.4   4.6    1.9  1  ANAPC9       Anaphase-promoting complex subunit 9
        0.2   11.5   3.1        1.5    8.7   1.6    2.7  2  EMP24_GP25L  emp24/gp25L/p24 family/GOLD


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   0.8         5   1.8e+04      90     111 ..     423     443 ..     393     447 .. 0.59
   2 !  108.7   0.0   4.8e-35   1.7e-31       7     114 ..     830     941 ..     824     943 .. 0.91

  Alignments for each domain:
  == domain 1  score: -4.3 bits;  conditional E-value: 5
                 SG-TTCGHHHHHHHHHHHHTCH CS
      ArfGap  90 krskssskekreefirakYeek 111
                 + +++s kek++    +kY+ k
  KHJ31911.1 423 Q-RQDSLKEKKRADSDSKYQIK 443
                 2.46677777777777777655 PP

  == domain 2  score: 108.7 bits;  conditional E-value: 4.8e-35
                 HCC.SCCCCB-TTT.-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS-..--HHHHHHHHHTCHHHHHHHHTTTC-TTTSG-TTCGHHHHH CS
      ArfGap   7 llk.epenkvCaDC.gakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldk..wedeelellkalgNkkaneileaklpkeekrskssskekre 101
                 ++  +++n+ CaDC +  + +W+s+nlg++lCieCsg+Hrslg+hiskvrsltld   ++++ +ell  +gN+  n ++eakl++ +k+s+++s+e r 
  KHJ31911.1 830 IRDaDQGNNWCADCnSGVKTEWVSINLGIILCIECSGIHRSLGTHISKVRSLTLDLqsFTTDIVELLLLVGNRLSNMVWEAKLEAGSKPSPQASRELRL 928
                 4445789*******555788*********************************99666***************************************** PP

                 HHHHHHHTCHTTC CS
      ArfGap 102 efirakYeekkfa 114
                 +fi+akY+++ + 
  KHJ31911.1 929 RFITAKYVDRIYL 941
                 ********99876 PP

>> BAR_3  BAR domain of APPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.2  16.7   4.7e-22   1.7e-18       8     237 ..     292     522 ..     288     523 .. 0.89

  Alignments for each domain:
  == domain 1  score: 67.2 bits;  conditional E-value: 4.7e-22
       BAR_3   8 kDSPkfResleevEaeleelekklkkllKlckrlieagkaysaaqkqfaqsLrelkkeskgdeetdesL.kkfsellqelenehtilldqaqrsikkpL 105
                 +D P fR++++  E+    +++++kk+lK  ++   a ++ ++a ++f++ Lre ++ + +   ++ +L + f ++ +e+  + ++   ++q+ i++p+
  KHJ31911.1 292 EDGPLFRATMKSLEQKTGSMRQRMKKVLKRAEAAHVALTESNDAISAFMEALREASFSNAN--AVQPALeHYFDNIAREIQIYEKQSTINLQKIIIEPM 388
                 79****************************************************9988743..3444441346666666666666667799******** PP

       BAR_3 106 ekFrkedlkevkekkkkFdkesekleaaleknaqlsk.kkkeseleeadnelkatrkkfhqasldyvlqinel.qerkkfeiletllsfmqaqltFfhq 202
                  k    d+k+++ kk++F+ es++++a +++++   + + ke++  ++d++ + +r++f     dy + ++ l   rk  e+l++l ++++aq++ +  
  KHJ31911.1 389 MKVYNIDIKQAESKKRDFEEESKDYYAYVSRYLGQRQdSLKEKKRADSDSKYQIKRRNFELKRFDYSSFMQDLhGGRKEQEVLSHLTKYAEAQTKGYLA 487
                 ********************************9765515567777799*************************44799********************* PP

       BAR_3 203 GyelfkdlepfmkeLsaqlqqlrarfeetaeekee 237
                 +   ++d+ p +  Lsa++q+  ++f+ +++e+ee
  KHJ31911.1 488 TAKKIEDMIPQLDALSAKVQEADKEFQYQRTEREE 522
                 **************************999999876 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.8   6.4e+03      60      68 ..      72      89 ..      46     111 .. 0.53
   2 !   40.3   0.1     1e-13   3.7e-10      16     104 ..     652     741 ..     637     742 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.8
                C.........TTSSSSTS CS
          PH 60 a.........tedpkrkf 68
                          ++d + +f
  KHJ31911.1 72 SnssnfilklNNDDELNF 89
                022222222223333333 PP

  == domain 2  score: 40.3 bits;  conditional E-value: 1e-13
                 C.........SEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHHHHHHH CS
          PH  16 k.........swkkrwfvLkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWikaiqsai 104
                            w+k w v++ ++++ y+n  + +    ++ i+l+ ++v+e    ++++r+fcfe++++    + + + qa++e++++ Wi+ai++ai
  KHJ31911.1 652 HsdprglnkqAWHKFWTVVDAGKVSEYSNW-KQRLDLHREPIDLRVASVREA---RNAERRFCFEVITP----QYKRVYQATTEDDMNCWISAINNAI 741
                 2233445567********************.78888889***********95...5**********999....57889******************98 PP

>> ANAPC9  Anaphase-promoting complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   4.6   0.00016      0.57      15     117 ..     426     535 ..     397     536 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00016
      ANAPC9  15 kqalkekikeesssk.fvlrkpaklskYDysvftnkkte...deesllpaik..eSqikawesaEriaqnliFdkddsdkevde.dedee.dsakeeke 105
                 +  lkek++++s sk  + r++ +l+ +Dys+f++   +   ++e l   +k  e q k ++   +  + +i + d    +v+e d++ + + +++e++
  KHJ31911.1 426 DS-LKEKKRADSDSKyQIKRRNFELKRFDYSSFMQDLHGgrkEQEVLSHLTKyaEAQTKGYLATAKKIEDMIPQLDALSAKVQEaDKEFQyQRTEREEK 523
                 33.33444444444438889999************99988865555555554449*******9999999999999977777777433332466677778 PP

      ANAPC9 106 ksslivsiPGYt 117
                 + +l +s P Yt
  KHJ31911.1 524 RRNLEMSNPIYT 535
                 888888989888 PP

>> EMP24_GP25L  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0     0.092   3.3e+02     116     152 ..     297     334 ..     201     343 .. 0.77
   2 ?    8.7   1.6   0.00042       1.5     104     152 ..     483     531 ..     390     539 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.092
  EMP24_GP25L 116 leselkkleekldsikreqky.lrereerlrdtnestn 152
                     ++k le+k+ s+++ +k  l++ e+ + ++ es+ 
   KHJ31911.1 297 FRATMKSLEQKTGSMRQRMKKvLKRAEAAHVALTESND 334
                  44588999999999999997614555555555556554 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00042
  EMP24_GP25L 104 ykdsakkekletleselkkleekldsikreqkylrereerlrdtnestn 152
                  +   a+ +k+e++  +l+ l+ k+++  +e++y+r+  e+ r+ +e  n
   KHJ31911.1 483 KGYLATAKKIEDMIPQLDALSAKVQEADKEFQYQRTEREEKRRNLEMSN 531
                  334566889999999********************99998888887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1021  (0.0569468); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.79u 0.28s 00:00:01.07 Elapsed: 00:00:00.44
# Mc/sec: 7600.01
//
Query:       KHJ31912.1  [L=701]
Description: putative glucosamine-fructose-6-phosphate aminotransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-58  195.5   0.1    3.4e-31  107.8   0.1    2.5  2  SIS       SIS domain
    8.2e-17   61.7   0.0    1.7e-16   60.7   0.0    1.4  1  GATase_6  Glutamine amidotransferase domain
      1e-10   41.6   0.0    2.3e-10   40.5   0.0    1.5  1  GATase_7  Glutamine amidotransferase domain
  ------ inclusion threshold ------
      0.012   14.6   0.0       0.02   13.8   0.0    1.3  1  GATase_4  Glutamine amidotransferases class-II


Domain annotation for each model (and alignments):
>> SIS  SIS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.8   0.1   7.7e-35   3.4e-31       2     129 ..     382     508 ..     381     510 .. 0.97
   2 !   85.4   0.0   6.6e-28     3e-24       4     129 ..     556     682 ..     553     684 .. 0.92

  Alignments for each domain:
  == domain 1  score: 107.8 bits;  conditional E-value: 7.7e-35
                 HCTSSEEEEEESHHHHHHHHHHHHHHHHHHTSEEEEEEHHHHHHTGGGG-STTCEEEEEESSSHHHHHHHHHHHHHHTTSEEEEEESSTTSHHHHHSSE CS
         SIS   2 LakakriyvlGaGtsyaiakelalkleeiggivvevedaselkhgvlalideddlvilisfsgetkdlvaaaelakergakiiaITdskgsplareadl 100
                 ++ ++ri+++++Gtsy++++ ++ ++ee++ i+ +ve+as++ ++  a++ +dd ++++s+sget+d+++a++ + erga +++I +  gs+++  +++
  KHJ31912.1 382 IRRCRRIIFIACGTSYHSCMAVRGTFEELTDIPIAVELASDFLDR-QAPVFRDDTCVFVSQSGETADSLLALRFCLERGALTVGIVNVVGSAISLLTHC 479
                 789******************************************.9**************************************************** PP

                 EEEEEEECHCSSSHCHHHHHHHHHHHHHH CS
         SIS 101 alyinaepetlvastksltaqlaaldala 129
                  +++na+pe++vastk++t+q++a  ++a
  KHJ31912.1 480 GVHVNAGPEIGVASTKAYTSQFIAMIMFA 508
                 **********************9988776 PP

  == domain 2  score: 85.4 bits;  conditional E-value: 6.6e-28
                 TSSEEEEEESHHHHHHHHHHHHHHHHHHTSEEEEEEHHHHHHTGGGG-STTCEEEEEESSSHHHHHHHHHH.HHHHTTSEEEEEESSTTSHHHHHSSEE CS
         SIS   4 kakriyvlGaGtsyaiakelalkleeiggivvevedaselkhgvlalideddlvilisfsgetkdlvaaae.lakergakiiaITdskgsplareadla 101
                 ++k++++lG+G+++a+a+e+alk++ei++ ++e++ ++elkhgvlal+de+ ++i+i +++  +++ ++a  ++ +r +k+i+I++ +++    e  ++
  KHJ31912.1 556 NQKSLLLLGRGSQFATALEGALKIKEISYLHCEAVMSGELKHGVLALVDENLPIIMILTRDSIFPKSLNAYqQVIARSGKPIVICNPNDDEFKSEQAEV 654
                 789**********************************************************99988888877*********************999555 PP

                 EEEEEECHCSSSHCHHHHHHHHHHHHHH CS
         SIS 102 lyinaepetlvastksltaqlaaldala 129
                 +++++    l+++++++++ql+a+++++
  KHJ31912.1 655 IEVPKTVDCLQGLLNVIPLQLMAYWLAI 682
                 555555555****************997 PP

>> GATase_6  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   0.0   3.7e-20   1.7e-16       8     124 ..      75     201 ..      69     209 .. 0.83

  Alignments for each domain:
  == domain 1  score: 60.7 bits;  conditional E-value: 3.7e-20
    GATase_6   8 slvedevalaHvRlaivglaeeegaqPf.psedgrlllvhNGeiynykelreelpalkglafrsrsDtevllall............eelGeevlerlr 93 
                 +++++++++aH+R+a++g + +  ++P  + ++ ++++vhNG i nykel+  l + kg++f++++Dte +++l+            ++l+++v+++l+
  KHJ31912.1  75 KVFDSHAGIAHTRWATHGPPSRLNCHPHrSDPKWQFSVVHNGIIINYKELKTLLIS-KGHKFETETDTECIAKLAkyiydqhptitfTDLAKAVIKELQ 172
                 47899***************77777***8889999*********************.****************9989996666666666668888**** PP

    GATase_6  94 Gmfafaiwdk.rentlilardrlgvkplyyav 124
                 G+f   + +   ++++i a  r g +pl+++v
  KHJ31912.1 173 GAFGLLLKSVhYPHEVIAA--RKG-SPLVIGV 201
                 *999988777677777666..555.6666665 PP

>> GATase_7  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.0     5e-14   2.3e-10      19      95 ..     105     193 ..      95     208 .. 0.84

  Alignments for each domain:
  == domain 1  score: 40.5 bits;  conditional E-value: 5e-14
    GATase_7  19 sedgrlvivfnGeiyNykelreeLeakghrfrtksDtevllallea...........ewgeealerlnGmfAfaiwd.eeekrlllaRD 95 
                 + + ++ +v+nG i Nykel+  L +kgh+f+t++Dte +++l ++           +  ++++++l+G f +++   +  +++++aR 
  KHJ31912.1 105 DPKWQFSVVHNGIIINYKELKTLLISKGHKFETETDTECIAKLAKYiydqhptitftDLAKAVIKELQGAFGLLLKSvHYPHEVIAARK 193
                 5566899***********************************9999**********99999999********99876333346666665 PP

>> GATase_4  Glutamine amidotransferases class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   4.5e-06      0.02      69     132 ..      77     143 ..      45     183 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 4.5e-06
    GATase_4  69 iksknvvaHiRkatqGevklenthpFvRelwgrewifAHnGdlkeykpkl....egrfePvGsTDsEl 132
                 + s+  +aH R at+G  +  n+hp  R+  + ++   HnG + +yk+      ++ ++   +TD+E 
  KHJ31912.1  77 FDSHAGIAHTRWATHGPPSRLNCHPH-RSDPKWQFSVVHNGIIINYKELKtlliSKGHKFETETDTEC 143
                 678999*******************6.77777778889***999888755445533333345677665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (701 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 4532.96
//
Query:       KHJ31913.1  [L=707]
Description: putative peptide-n4-(n-acetyl-beta-glucosaminyl)asparagine amidase a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.8e-168  560.3   0.5   4.1e-168  559.8   0.5    1.2  1  PNGaseA   Peptide N-acetyl-beta-D-glucosaminyl asparaginase a


Domain annotation for each model (and alignments):
>> PNGaseA  Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  559.8   0.5  2.3e-172  4.1e-168      12     434 .]     138     551 ..     126     551 .. 0.97

  Alignments for each domain:
  == domain 1  score: 559.8 bits;  conditional E-value: 2.3e-172
     PNGaseA  12 keevlllehtFgnsygkPfvgkytpPecsfdrvvlnltvtssGrqydRlallylgdvevwRTSTaepttagivwtylKdvseYlaLfkepqklifdLgN 110
                  + v l+e++FgnsygkPf+g+y pP c+f+rv++n+t+ s+Grq+dRla++yl+d+evwRTSTaep+++giv++y+Kd+s+Y++L+k+pqklifdLgN
  KHJ31913.1 138 VCDVKLMEYSFGNSYGKPFIGEYMPPPCEFNRVIMNFTANSQGRQFDRLAIMYLNDIEVWRTSTAEPKNSGIVFEYIKDMSAYMSLWKNPQKLIFDLGN 236
                 699************************************************************************************************ PP

     PNGaseA 111 liddtytgsfnvtltatfyaseelletaeaadlilpisarksasnsssafslpsdkatvtlslprntsravlsisasgqaaeEfWysNvlssdteafed 209
                 l+d+tytg  n+tl+a+fy ++   + +++ad i+p+s rks+ n++s+f+lpsd a +++slprn++rav+s+sa+gq++eEfW+ Nvl+s te+f+ 
  KHJ31913.1 237 LVDETYTGHINATLSARFYMAT---TVNQPADQIIPVSLRKSNLNAPSVFKLPSDIAVNSISLPRNAYRAVFSVSACGQGNEEFWWQNVLHSNTETFK- 331
                 *********************9...999**********************************************************************. PP

     PNGaseA 210 tvgelyghspfRevqvlidGqlagvvwPfpviftGGisPglwrPivgidafDlreleiditpfLplLldgedheleikvagledeeegtatlsktvgsy 308
                  + +l g+spfRevq+lidG+lagv+wPfp+iftGG++PglwrPivgid++Dlr + iditp+L +L dg +h++ei+v+g++++ e+t +l++ vg++
  KHJ31913.1 332 -DVKLFGYSPFREVQILIDGHLAGVQWPFPIIFTGGVAPGLWRPIVGIDTYDLRDHVIDITPWLSILSDGLPHRFEIRVVGIQEKGEETGKLTDFVGDN 429
                 .89************************************************************************************************ PP

     PNGaseA 309 Wvvtgnlfvwldssskesegtivetdtkpeikakapslkvtreleqnsatgtneslsytveaerslsvest........tvtwsqklsfsntqllsqqg 399
                 W+v+g++f+w ds +      +++++++pei+ + p +k++++++qn atg+ne+l+y+v+ +r++s++st         ++w+q+l+++n++++++qg
  KHJ31913.1 430 WLVSGKIFLWQDSGD-----GTSTYGSQPEIDIEDPVIKISSSITQN-ATGANETLTYVVDISRTISISSTistadgphRISWKQNLTTTNYGQFTAQG 522
                 *************99.....788899999******************.*********************99**************************** PP

     PNGaseA 400 lsqsvnqttsgkstvtekseakesdevevsfsyPl 434
                 ++q ++q+t+gk+++t         e+++++syPl
  KHJ31913.1 523 NIQVNSQITNGKDESTGGV------EFKTEYSYPL 551
                 **************98655......6678899997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (707 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       451  (0.0251548); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 5166.77
//
Query:       KHJ31914.1  [L=1444]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.9e-73  244.2  62.9    2.8e-38  131.5  18.0    3.0  3  ABC2_membrane    ABC-2 type transporter
    1.1e-37  129.5   0.0    3.9e-19   69.5   0.0    2.5  2  ABC_tran         ABC transporter
    7.7e-23   80.2  11.1    7.5e-21   73.8   0.0    4.2  4  PDR_CDR          CDR ABC transporter
    4.7e-15   56.0   0.1    1.6e-14   54.3   0.0    1.9  1  ABC_trans_N      ABC-transporter N-terminal
    1.7e-05   24.8   0.1       0.19   11.5   0.0    2.5  2  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
    9.6e-05   22.8   0.5      0.061   13.7   0.3    2.8  2  AAA_16           AAA ATPase domain
    0.00012   21.8   0.4     0.0074   16.0   0.1    2.8  2  AAA_29           P-loop containing region of AAA domain
    0.00017   20.8  21.3    0.00017   20.8  21.3    3.0  2  ABC2_membrane_3  ABC-2 family transporter protein
    0.00022   21.4   0.1      0.043   14.0   0.0    2.6  2  AAA_33           AAA domain
    0.00033   20.6   0.1     0.0019   18.1   0.0    2.1  2  RsgA_GTPase      RsgA GTPase
     0.0014   18.3   0.7      0.016   14.8   0.1    2.5  2  AAA_25           AAA domain
     0.0032   17.9   0.0       0.26   11.7   0.0    2.6  2  AAA_17           AAA domain
     0.0041   16.6   0.0        0.7    9.3   0.0    2.9  3  SMC_N            RecF/RecN/SMC N terminal domain
     0.0043   17.3   0.1      0.019   15.2   0.0    2.1  2  AAA_28           AAA domain
     0.0046   17.5   0.0       0.21   12.1   0.0    2.6  2  AAA_18           AAA domain
  ------ inclusion threshold ------
      0.017   14.9   0.9        2.3    7.9   0.2    2.3  2  AAA_30           AAA domain
      0.018   15.3   0.7        1.3    9.3   0.2    3.2  3  AAA_22           AAA domain
      0.046   13.3   2.2       0.71    9.4   0.5    2.5  2  cobW             CobW/HypB/UreG, nucleotide-binding domain
      0.047   14.2   2.0       0.22   12.0   0.0    2.8  3  AAA_23           AAA domain
      0.058   13.3   1.1        4.1    7.3   0.2    2.6  2  NACHT            NACHT domain
       0.14   12.2   1.0         25    5.0   0.0    2.9  3  MMR_HSR1         50S ribosome-binding GTPase
       0.18   12.2   0.3         26    5.3   0.0    2.6  2  AAA              ATPase family associated with various cellul
       0.23   11.8   1.2         12    6.2   0.0    2.6  2  AAA_19           AAA domain


Domain annotation for each model (and alignments):
>> ABC2_membrane  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.2  31.5   2.4e-38   1.9e-35       2     210 .]     477     686 ..     476     686 .. 0.98
   2 ?   -0.8   0.2       1.1   8.7e+02     104     127 ..     744     767 ..     739     777 .. 0.76
   3 !  131.5  18.0   3.6e-41   2.8e-38       2     209 ..    1136    1344 ..    1135    1345 .. 0.98

  Alignments for each domain:
  == domain 1  score: 122.2 bits;  conditional E-value: 2.4e-38
  ABC2_membrane   2 qikallkreflqrwrdpslgllwrliqplllalvfgtvfgnlg.nsedglnrpgllffsvlflafsaltsvapvferergvlerelvsplyslsay 96 
                    q+++ll+r+fl  w+d++++ ++++i+ +++a+v+g+v+ nl+ +s++++ r gllf+++lf +f+a+t++ +v++++r+v++++ ++ +y++sa 
     KHJ31914.1 477 QVLTLLRRSFLVKWQDKFTL-AVSWITSIVIAVVLGSVWLNLPtTSASAFRRGGLLFIALLFPMFQAFTEL-AVTMMGRPVVNKHKAFAFYRPSAL 570
                    899**************888.**********************8888888*********************.************************ PP

  ABC2_membrane  97 vlakvlvelpvsllqalifllivyflvgldls..rfflflllllltalaasslgllisalapsfedasqlaslvllpllllsGffipidsmpkwlq 190
                     la+++v++++s++ +l+f +ivyf++gl l+  +ff f+ ++l+ +la+s +++ i+ ++p+f+ a+ ++  +++++++++G++i  +s + w++
     KHJ31914.1 571 WLAHLIVDMAFSAAKILVFCIIVYFMTGLVLEagAFFTFYGTILIAYLAISLFFRSIGFMCPDFDYAIKFTVTFIMLFIITTGYLIQNQSQHIWFK 666
                    ********************************9999*******************************************************99*** PP

  ABC2_membrane 191 wiaylnPltyavealrsnlf 210
                    wi+y+n +  a+  +++n+f
     KHJ31914.1 667 WIYYVNAIGLAFTTIMINEF 686
                    ****************9997 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.1
  ABC2_membrane 104 elpvsllqalifllivyflvgldl 127
                    ++   l++++i++li+y+++g  +
     KHJ31914.1 744 KIFGLLILITIVFLISYLILGEAI 767
                    566678888888889998887555 PP

  == domain 3  score: 131.5 bits;  conditional E-value: 3.6e-41
  ABC2_membrane    2 qikallkreflqrwrdpslgllwrliqplllalvfgtvfgnlgnsedglnrpgllffsvlflafsaltsvapvferergvlerelvsplyslsa 95  
                     q+k+++ r+ l++wr++++g ++rl+++ +++lv g+++ nl++s++ l++  +l+f v  l f++l +v + + + r +++re ++++ys +a
     KHJ31914.1 1136 QLKVVIARTNLSYWRSSNYG-FTRLFNHAIIGLVNGLAYMNLDTSQQSLQYRIFLIFQVSVLPFLILNQVEIKYSISRMIYYREASAKMYSQFA 1228
                     99******************.9**********************9************************************************* PP

  ABC2_membrane   96 yvlakvlvelpvsllqalifllivyflvgldls..rfflflllllltalaasslgllisalapsfedasqlaslvllpllllsGffipidsmpk 187 
                     ++l+ v++e+p+sll++l+f+l  yf+ gl  +  + ++ ++++++t ++++slg l++al+ps    s+l +++++ + l++G+ ip+ ++pk
     KHJ31914.1 1229 FALSLVVAEIPYSLLCVLAFFLPLYFIPGLSKTpsSAGYQFAIVMVTEFFSVSLGQLLAALTPSPFISSLLDPFIMIAFALFCGVTIPKLQIPK 1322
                     ********************************98777********************************************************* PP

  ABC2_membrane  188 wlqwiaylnPltyavealrsnl 209 
                     +++w+++l P+t +v ++++++
     KHJ31914.1 1323 YWRWLYELDPITRLVGGMIVTE 1344
                     **************99998876 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.0   2.3e-18   1.8e-15       8     136 ..     157     309 ..     150     310 .. 0.91
   2 !   69.5   0.0     5e-22   3.9e-19       1     137 []     840     991 ..     840     991 .. 0.92

  Alignments for each domain:
  == domain 1  score: 57.6 bits;  conditional E-value: 2.3e-18
                 EETTSEEEEEESTTSSHHHHHHHHTTSS--...SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.....................HHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....................xxx RF
    ABC_tran   8 lkegekvaivGenGaGKStLlkllagllkp...teGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.....................esd 82 
                  k+ge+v ++G+ G+G++t+lk+++++ +     +Ge+l+   ++k+    ++r e  + ++++ + p+ltv+++                      ++
  KHJ31914.1 157 AKPGEMVLVLGRPGSGCTTFLKVITNQRSGftrINGEVLYGPFSSKT-FAAQYRGETVYNQEDDIHIPTLTVGQTlgfaidlktpgkrpagiskakFKE 254
                 589***********************99888889****777666666.899***************************************988874444 PP

                 TCHHHHHHHSTTGGTTCBGESTTS.GGS-HHHHHHHHHHHHHHHTSSEEEEESTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  83 eeiekalsklglkelkdtvvkssp.ssLSgGqkqrvalarallkkpkllllDEpt 136
                 e i+++l+ ++++++k+t v+++  + +SgG+++rv++a++l + +++  +D+ t
  KHJ31914.1 255 EVIATLLKMFNIEHTKNTMVGDNFiRGVSGGERKRVSIAEMLTTSATVCAWDNST 309
                 4499****************99999***************************987 PP

  == domain 2  score: 69.5 bits;  conditional E-value: 5e-22
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--..SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH................HH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................xx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkp..teGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren................es 81 
                 l+n+   +++g+++a++G +GaGK+tLl ++a   +    +Geil+dg +       s++++ ++ +q++   p+ tvre                 e+
  KHJ31914.1 840 LNNIFGYVEPGSLTALMGASGAGKTTLLDVIAARKTVgvISGEILVDGLKPGG----SFQRQTSYAEQQDLCEPTQTVREAlrfsadlrqpfdtsqcEK 934
                 67888899************************99988889****999877766....9***************************99999998766666 PP

                 HTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEE.EESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxx RF
    ABC_tran  82 deeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpklll.lDEpta 137
                  + +e++ls l++++++d ++++  + LS  q++rv +   l+ kp+lll lDEpt+
  KHJ31914.1 935 YAYVEEILSLLEMEDIADAIIGEPNTGLSVEQRKRVTIGIELAAKPELLLfLDEPTS 991
                 666*******************************************987549***96 PP

>> PDR_CDR  CDR ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.5         9     7e+03      41      70 ..     565     595 ..     560     603 .. 0.49
   2 ?   -1.0   1.1       2.1   1.7e+03      50      76 ..     634     660 ..     616     666 .. 0.76
   3 !   73.8   0.0   9.7e-24   7.5e-21       1      89 [.     699     785 ..     699     788 .. 0.96
   4 !   11.1   0.1   0.00035      0.27      31      73 ..    1400    1441 ..    1396    1444 .] 0.88

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 9
     PDR_CDR  41 yssshlwrnfgil.iaflifflalyllatel 70 
                 y++s lw    i+ +af +  +++ ++++ +
  KHJ31914.1 565 YRPSALWLAHLIVdMAFSAAKILVFCIIVYF 595
                 5566677433332244444444444443333 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.1
     PDR_CDR  50 fgiliaflifflalyllatelisaeks 76 
                 f   i f++ f++l +++t ++ +++s
  KHJ31914.1 634 FDYAIKFTVTFIMLFIITTGYLIQNQS 660
                 556788999999999999888766655 PP

  == domain 3  score: 73.8 bits;  conditional E-value: 9.7e-24
     PDR_CDR   1 vPsgpgyenvseenrvCavvGavpGqeyVsGddYlelsfgyssshlwrnfgiliaflifflalyllatelisaekskgevlvfkrgkap 89 
                 vPsgpgy+n   +n+vC++ G++pG + V G+dYl++ ++y+s+++w+ fg li+ +i+fl+ yl++ e i++ +++ ++ vf++ +++
  KHJ31914.1 699 VPSGPGYNN--IKNQVCTLPGSIPGLTEVYGSDYLRQGYSYKSEDIWKIFGLLILITIVFLISYLILGEAITWGAGGNTARVFQKPNRE 785
                 8*******7..68***********************************************************************98776 PP

  == domain 4  score: 11.1 bits;  conditional E-value: 0.00035
     PDR_CDR   31 GddYlelsfgyssshlwrnfgiliaflifflalyllatelisa 73  
                  Gd++ +  +g++++++wr++gi +a++   l+l l+a+ ++++
  KHJ31914.1 1400 GDQFYN-GLGLQYNNRWRDLGIFLAMVGSNLILLLIASRFLNF 1441
                  677777.899**************************9998876 PP

>> ABC_trans_N  ABC-transporter N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.3   0.0     2e-17   1.6e-14       2      81 .]      36     123 ..      35     123 .. 0.74

  Alignments for each domain:
  == domain 1  score: 54.3 bits;  conditional E-value: 2e-17
  ABC_trans_N   2 Lartlsrqssssssssss..e..sssedeeeed..........se.FdlekwlknlreridrdgikprklGVvFknLtVeGvgsgadyqpTvgna 81 
                  L+r+ls+ s  s++++ s  +  s  ed    +          s+ F+le+ l+  +  ++++gi+p+++GVv++nL+V+G++   +y++T+ +a
   KHJ31914.1  36 LERRLSSPSWISHTAA-SvrTsiS--ED----TengysgnttiSPhFNLEETLRGTKLVAEKSGIRPKHIGVVWENLSVYGTSGQNNYVKTFIDA 123
                  7788887522222222.2221121..11....12234567889*************************************************875 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   0.00045      0.35       1      20 [.     852     871 ..     852     905 .. 0.72
   2 !   11.5   0.0   0.00025      0.19     259     296 ..     982    1018 ..     972    1023 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00045
      AAA_21   1 lnvliGpNgsGKSnLLdald 20 
                 l++l G+ g+GK++LLd + 
  KHJ31914.1 852 LTALMGASGAGKTTLLDVIA 871
                 699***************93 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00025
      AAA_21  259 sllliDEpEngLHPkllrrllellkelsrngaQviltT 296 
                   ll++DEp +gL+ +    ++++l++l+r  +Q il T
  KHJ31914.1  982 LLLFLDEPTSGLDSQSAFNIVRFLRKLAR-AGQAILCT 1018
                  69**********************99999.89997776 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.016        12      11      57 ..     148     189 ..     141     224 .. 0.68
   2 !   13.7   0.3   7.9e-05     0.061      10      63 ..     838     886 ..     835    1033 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.016
      AAA_16  11 qLlsalervrsgrpelvllsGesGvGKsslvrellralekdggiflr 57 
                 ++l  ++ v++++ e+vl+ G +G+G ++ ++ + ++    +  f+r
  KHJ31914.1 148 EILKSFRGVAKPG-EMVLVLGRPGSGCTTFLKVITNQ----RSGFTR 189
                 4555567677776.9**************99888762....233333 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 7.9e-05
      AAA_16  10 eqLlsalervrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdql 63 
                 + L+++++ v  g  +l+ l G+sG GK++l++ ++   +k+ + +++g+    
  KHJ31914.1 838 RLLNNIFGYVEPG--SLTALMGASGAGKTTLLDVIAA--RKT-VGVISGEILVD 886
                 5677777777666..7999*************99994..444.66666665555 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.14   1.1e+02      22      39 ..     160     177 ..     152     183 .. 0.83
   2 !   16.0   0.1   9.5e-06    0.0074      22      43 ..     850     871 ..     845     873 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.14
      AAA_29  22 kgatlltGpsGsGKSTll 39 
                  +++l+ G+ GsG +T+l
  KHJ31914.1 160 GEMVLVLGRPGSGCTTFL 177
                 4599************98 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 9.5e-06
      AAA_29  22 kgatlltGpsGsGKSTllDAiq 43 
                  + t l+G+sG+GK+TllD i+
  KHJ31914.1 850 GSLTALMGASGAGKTTLLDVIA 871
                 44899**************876 PP

>> ABC2_membrane_3  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8  21.3   2.2e-07   0.00017     162     341 ..     529     758 ..     346     762 .. 0.87
   2 ?   -2.6  15.1       2.8   2.2e+03     215     309 ..    1234    1336 ..    1169    1343 .. 0.75

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 2.2e-07
  ABC2_membrane_3 162 flvgliliilifitasfiavsi.veEkesrikelqlvsgvsplqywlskilgdflvyllqlllilll...afglgipfgnlglllllfllfgla 251
                       l++++l++++f  ++ +av +  +   +  k+  +    +p+++wl++++ d++ ++  +l+++++   + gl ++ g ++ +   +l+ +la
       KHJ31914.1 529 GLLFIALLFPMFQAFTELAVTMmGRPVVN--KHKAFAF-YRPSALWLAHLIVDMAFSAAKILVFCIIvyfMTGLVLEAGAFFTFYGTILIAYLA 619
                      36678888888888887766541455555..7778888.9******************999998887233555455555555555999999999 PP

  ABC2_membrane_3 252 yialgyllsslfknsetaqilifivilllsgffgglfpledlpsalkwifsiiPffapglgllrlitgdplwe..................... 324
                      ++ ++  +++++ + + a+ +++ +i+l+++  g+l+  ++ + ++kwi      +a+gl++++++ ++ + +                     
       KHJ31914.1 620 ISLFFRSIGFMCPDFDYAIKFTVTFIMLFIITTGYLIQNQSQHIWFKWIY---YVNAIGLAFTTIMINE-F-Rrliltcsseslvpsgpgynni 708
                      99999999*************99999978888888885444444444444...5679999999999877.4.45888899999999999999** PP

  ABC2_membrane_3 325 .................................illsliilalfavvyll 341
                                                       i+  +++l+l+++v+l+
       KHJ31914.1 709 knqvctlpgsipgltevygsdylrqgysyksedIWKIFGLLILITIVFLI 758
                      ***********************************************986 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.8
  ABC2_membrane_3  215 lvyllqlllilllafgl......gipfg..nlglllllfllfglayialgyllsslfknsetaqilifivilllsgffgglfpledlpsalk 298 
                       +v+ +++ l+++laf l      g++ +  + g+ +  +++  + +++lg ll +l+ ++   ++l +++++ + +f+g+++p  ++p++++
       KHJ31914.1 1234 VVAEIPYSLLCVLAFFLplyfipGLSKTpsSAGYQFAIVMVTEFFSVSLGQLLAALTPSPFISSLLDPFIMIAFALFCGVTIPKLQIPKYWR 1325
                       3333444443333333333333435555558899999***********************************999999999**767****** PP

  ABC2_membrane_3  299 wifsiiPffap 309 
                       w+  + P++ +
       KHJ31914.1 1326 WLYELDPITRL 1336
                       *9988888765 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.043        34       1      34 [.     162     196 ..     162     248 .. 0.73
   2 !   14.0   0.0   5.5e-05     0.043       2      56 ..     853     908 ..     852     930 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.043
      AAA_33   1 lvllvGlpGsGKstlaerllkklg.avllssdtlr 34 
                 +vl+ G pGsG +t+++ + +++  +++++  +l+
  KHJ31914.1 162 MVLVLGRPGSGCTTFLKVITNQRSgFTRINGEVLY 196
                 6999*************998777779999888743 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 5.5e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdtlrrrlfg.tdqqsktdytrvldrly 56 
                 + l G++G+GK+tl++ ++++ ++ ++s  +l + l++    q++t y++  d + 
  KHJ31914.1 853 TALMGASGAGKTTLLDVIAARKTVGVISGEILVDGLKPgGSFQRQTSYAEQQDLCE 908
                 5689******************************9999855556666666555544 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0         2   1.6e+03      88     122 ..     148     183 ..     135     192 .. 0.78
   2 !   18.1   0.0   2.5e-06    0.0019      53     124 ..     802     875 ..     794     884 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 2
                  TTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase  88 egleelkellkd.ktsvlvGqSGvGKStLinallpe 122
                  e l++ + + k  ++++++G  G G +t++++++++
   KHJ31914.1 148 EILKSFRGVAKPgEMVLVLGRPGSGCTTFLKVITNQ 183
                  555556666665589999*************99886 PP

  == domain 2  score: 18.1 bits;  conditional E-value: 2.5e-06
                  EE-GGG--HHHHHHHHHHHH...HHTTSEEEE--TTTHTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-- CS
  RsgA_GTPase  53 lnKiDlleeeeeleelkeel...ealgyevllvsaktkegleelkellkd.ktsvlvGqSGvGKStLinallpele 124
                  ++K D+++e++ ++   +++   e+l y+v + s k  + l+++  +++  ++++l+G SG+GK+tL+++++ +++
   KHJ31914.1 802 MTKSDVANEND-INIETNAIltwEDLCYDVPTPSGK-LRLLNNIFGYVEPgSLTALMGASGAGKTTLLDVIAARKT 875
                  68999999998.444444440014455666655554.677888888888889******************998743 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.44   3.4e+02      25      50 ..     152     177 ..     135     182 .. 0.84
   2 !   14.8   0.1     2e-05     0.016      27      57 ..     844     874 ..     833     885 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.44
      AAA_25  25 lvkgllpagelallaGapgtGKttla 50 
                  ++g+   ge +l+ G+pg+G tt++
  KHJ31914.1 152 SFRGVAKPGEMVLVLGRPGSGCTTFL 177
                 57899999*************99986 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 2e-05
      AAA_25  27 kgllpagelallaGapgtGKttlaldlalav 57 
                  g++  g+l++l+Ga+g+GKttl+  +a+  
  KHJ31914.1 844 FGYVEPGSLTALMGASGAGKTTLLDVIAARK 874
                 578899******************9998865 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0      0.13        98       1      31 [.     166     196 ..     166     223 .. 0.79
   2 !   11.7   0.0   0.00034      0.26       2      61 ..     857     916 ..     856     948 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.13
                 EE-TTSSHHHHHHHHH.HHHTEEEEEHHHHHH CS
      AAA_17   1 lGgPGsGKgtqceklv.ekygfthlsaGdllr 31 
                 lG PGsG +t ++ +  ++ gft ++ G++l+
  KHJ31914.1 166 LGRPGSGCTTFLKVITnQRSGFTRIN-GEVLY 196
                 699*********88874567999999.88887 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00034
                 E-TTSSHHHHHHHHHHHHTEEEEEHHHHHHHHHHTTTS.HSSHHHHCTSHHHHHHHHHHHH CS
      AAA_17   2 GgPGsGKgtqceklvekygfthlsaGdllreeakrggl.akardemrklpleekkelqkea 61 
                 G  G+GK+t+++ ++ +  + ++s G++l +  k+gg+ +++ ++ ++ +l e  ++ +ea
  KHJ31914.1 857 GASGAGKTTLLDVIAARKTVGVIS-GEILVDGLKPGGSfQRQTSYAEQQDLCEPTQTVREA 916
                 99**********************.***********9867777777776666655555554 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.87   6.8e+02     110     151 ..     244     296 ..      34     339 .. 0.69
   2 ?    3.0   0.0     0.073        57      25      44 ..     851     870 ..     843     876 .. 0.91
   3 !    9.3   0.0   0.00089       0.7     156     205 ..     978    1027 ..     933    1040 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.87
                 EEEETTEEE-HHHHHHHHHCTT-STT...........CS-HHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxx RF
       SMC_N 110 eykingkevtkkevsellesagiske...........lLSgGektLvalaLlf 151
                    i + + +++ ++ ll++ +i+ +             SgGe++ v++a ++
  KHJ31914.1 244 PAGISKAKFKEEVIATLLKMFNIEHTkntmvgdnfirGVSGGERKRVSIAEML 296
                 34455555555556666666666665788888888888888888888887665 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.073
                 SEEEEEESTTSSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxx RF
       SMC_N  25 sftaivGpNGSGKsnlldAi 44 
                 s+ta++G+ G+GK+ lld i
  KHJ31914.1 851 SLTALMGASGAGKTTLLDVI 870
                 579***************88 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00089
                  CS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  156 vkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemleka 205 
                  +kp+ l +lDe  + LD +   +++++l++     Q i  ++++   +  
  KHJ31914.1  978 AKPELLLFLDEPTSGLDSQSAFNIVRFLRKLARAGQAILCTIHQPNAALF 1027
                  689999**********************************9988755444 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0         4   3.1e+03       2      30 ..     163     194 ..     162     218 .. 0.76
   2 !   15.2   0.0   2.4e-05     0.019       3      61 ..     854     915 ..     852     947 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 4
      AAA_28   2 ivitGgestGKTtlleaLaar..gypvv.pEa 30 
                 + ++G +++G Tt l+ ++++  g++ +  E+
  KHJ31914.1 163 VLVLGRPGSGCTTFLKVITNQrsGFTRInGEV 194
                 67899**********99997657655444665 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 2.4e-05
      AAA_28   3 vitGgestGKTtlleaLaargyp.vv.pEaareileeklakgedalpwv.edllafaervle 61 
                 +++G++++GKTtll  +aar+++ v+  E+  + l+ ++ ++++++ ++ +dl++  + v e
  KHJ31914.1 854 ALMGASGAGKTTLLDVIAARKTVgVIsGEILVDGLKPGGSFQRQTSYAEqQDLCEPTQTVRE 915
                 799*****************877455899999999988888888777765666655555444 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.25     2e+02       1      27 [.     163     190 ..     163     222 .. 0.72
   2 !   12.1   0.0   0.00027      0.21       3      66 ..     855     933 ..     854     984 .. 0.61

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.25
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gfgvn 27 
                 +l+ G pG+G tt+ k + +   gf ++
  KHJ31914.1 163 VLVLGRPGSGCTTFLKVITNQRsGFTRI 190
                 789*************996665566333 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 0.00027
      AAA_18   3 ltGtpGvGKttlakeLskrlgf.................gvnlrdvakenglllevdpealdeskrldedkldklldalee 66 
                 l+G++G+GKttl + ++ r  +                  ++ +++a + +l+++ +    +e +r+  d ++   +   e
  KHJ31914.1 855 LMGASGAGKTTLLDVIAARKTVgvisgeilvdglkpggsFQRQTSYAEQQDLCEPTQTV--REALRFSADLRQPFDTSQCE 933
                 89**************8775444477666777777776667777777777777777666..56555555555554444444 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.022        17      14      40 ..     157     182 ..     147     213 .. 0.86
   2 ?    7.9   0.2     0.003       2.3      19      40 ..     851     872 ..     846     888 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.022
      AAA_30  14 ltsgdrvavltGpAGtGKttalkalre 40 
                 ++ g  ++++ G++G+G tt lk++++
  KHJ31914.1 157 AKPG-EMVLVLGRPGSGCTTFLKVITN 182
                 4444.5999**************9975 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.003
      AAA_30  19 rvavltGpAGtGKttalkalre 40 
                  +++l G+ G+GKtt+l ++++
  KHJ31914.1 851 SLTALMGASGAGKTTLLDVIAA 872
                 58899************99965 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.22   1.7e+02       6      29 ..     161     184 ..     157     214 .. 0.81
   2 ?   -2.2   0.0       5.8   4.5e+03      80     104 ..     340     363 ..     305     382 .. 0.68
   3 ?    9.3   0.2    0.0016       1.3       5      29 ..     850     874 ..     847    1013 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.22
      AAA_22   6 gilvvtGesGtGKTtllrrlleql 29 
                  +++v G +G+G Tt l+ +++q 
  KHJ31914.1 161 EMVLVLGRPGSGCTTFLKVITNQR 184
                 6899**************999985 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 5.8
      AAA_22  80 ealeqalraravielliiDEaqhlr 104
                  +  + + ++++ ++l+iD  q ++
  KHJ31914.1 340 YQASEKIYKQFD-KVLVIDSGQEVF 363
                 344445555555.899999888754 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.0016
      AAA_22   5 agilvvtGesGtGKTtllrrlleql 29 
                  ++++++G sG+GKTtll  ++ ++
  KHJ31914.1 850 GSLTALMGASGAGKTTLLDVIAARK 874
                 57899************98877776 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.097        76       3      26 ..     163     186 ..     161     191 .. 0.86
   2 ?    9.4   0.5   0.00091      0.71       3      36 ..     853     883 ..     851     888 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.097
                 EEEEESTTCCHHHHHHHHHCT--S CS
        cobW   3 tvltGflGsGKTtLlnhllenrag 26 
                 +++ G +GsG Tt+l+ ++++r+g
  KHJ31914.1 163 VLVLGRPGSGCTTFLKVITNQRSG 186
                 67889***********99988765 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00091
                 EEEEESTTCCHHHHHHHHHCT--SS-EEEEESS- CS
        cobW   3 tvltGflGsGKTtLlnhllenraglklavivNef 36 
                 t l G  G+GKTtLl  + ++   + + vi +e+
  KHJ31914.1 853 TALMGASGAGKTTLLDVIAAR---KTVGVISGEI 883
                 7899***********999865...7889998887 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       7.1   5.6e+03     153     165 ..     405     445 ..     311     460 .. 0.49
   2 ?   -0.2   0.0       1.6   1.2e+03      37      66 ..     765     810 ..     762     826 .. 0.51
   3 ?   12.0   0.0   0.00029      0.22      21      40 ..     852     871 ..     844     873 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 7.1
      AAA_23 153 e............................rleelekeleel 165
                                              ++++++++lee 
  KHJ31914.1 405 LylrenlphtpdtlsaafnqstfaqdldfEIAQYKQQLEED 445
                 03333333333333333333333333334444444444443 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.6
      AAA_23  37 dAiklaLygetprlsrks................grgfeksdveie 66 
                 +Ai+++ +g t+r   k                 +r++ ksdv+ e
  KHJ31914.1 765 EAITWGAGGNTARVFQKPnrerdklnmalkekreKRRMTKSDVANE 810
                 8999999999988877663333333333333333223333333322 PP

  == domain 3  score: 12.0 bits;  conditional E-value: 0.00029
      AAA_23  21 ltlItGpNGaGKTTildAik 40 
                 lt++ G  GaGKTT+ld i 
  KHJ31914.1 852 LTALMGASGAGKTTLLDVIA 871
                 89***************986 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.052        41       2      21 ..     162     181 ..     161     188 .. 0.89
   2 ?    7.3   0.2    0.0052       4.1       2      21 ..     852     871 ..     851     882 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.052
                 CEEEEC-TTTCHHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqkla 21 
                 +v++ G++GsG Tt+l+ + 
  KHJ31914.1 162 MVLVLGRPGSGCTTFLKVIT 181
                 689*************9875 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0052
                 CEEEEC-TTTCHHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqkla 21 
                 l +l G++G GKTtLl  +a
  KHJ31914.1 852 LTALMGASGAGKTTLLDVIA 871
                 56899***********9887 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.032        25       2      30 ..     163     191 ..     162     232 .. 0.90
   2 ?    4.7   0.1      0.04        31       3      22 ..     854     873 ..     852     883 .. 0.83
   3 ?   -2.9   0.0       8.9   6.9e+03       3      11 ..     953     961 ..     953     963 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.032
                 EEEEESTTSSHHHHHHHHHTSTEEESSST CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkp 30 
                 v+++Grp +G +t+++ +t++++  ++++
  KHJ31914.1 163 VLVLGRPGSGCTTFLKVITNQRSGFTRIN 191
                 789*****************987666555 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.04
                 EEEESTTSSHHHHHHHHHTS CS
    MMR_HSR1   3 aivGrpNvGKStLinaltge 22 
                 a++G + +GK+tL+  +  +
  KHJ31914.1 854 ALMGASGAGKTTLLDVIAAR 873
                 89************988765 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 8.9
                 EEEESTTSS CS
    MMR_HSR1   3 aivGrpNvG 11 
                 ai+G pN+G
  KHJ31914.1 953 AIIGEPNTG 961
                 79******9 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.033        26       1      35 [.     163     196 ..     163     218 .. 0.79
   2 ?    4.2   0.1      0.07        55       3      21 ..     855     873 ..     853     902 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.033
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsell 35 
                 vl+ G pG G T++ k + ++  + f +i+g  l 
  KHJ31914.1 163 VLVLGRPGSGCTTFLKVITNQ-RSGFTRINGEVLY 196
                 799***************999.6668888876665 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.07
                 EESSTTSSHHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavake 21 
                 l+G  G GKT+l   +a  
  KHJ31914.1 855 LMGASGAGKTTLLDVIAAR 873
                 89*************9987 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.016        12       8      34 ..     158     184 ..     154     279 .. 0.90
   2 ?    3.6   0.2       0.1        79      11      32 ..     851     872 ..     844     884 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.016
      AAA_19   8 lkekvllvtaGpGtGKTrvlkhivall 34 
                  + +++lv++ pG+G T+ lk i +  
  KHJ31914.1 158 KPGEMVLVLGRPGSGCTTFLKVITNQR 184
                 56789***************9998765 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.1
      AAA_19  11 kvllvtaGpGtGKTrvlkhiva 32 
                 ++ ++++  G GKT++l  i a
  KHJ31914.1 851 SLTALMGASGAGKTTLLDVIAA 872
                 567899*********9987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1444 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       871  (0.0485805); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 1.00u 0.32s 00:00:01.32 Elapsed: 00:00:00.45
# Mc/sec: 9651.73
//
Query:       KHJ31915.1  [L=139]
Description: putative myosin regulatory light chain cdc4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.5e-09   37.4   0.2    1.6e-05   25.3   0.0    2.1  2  EF-hand_7  EF-hand domain pair
    1.2e-08   34.2   0.5       0.01   15.7   0.0    3.0  3  EF-hand_6  EF-hand domain
      5e-07   29.9   0.0      0.046   14.0   0.0    2.5  2  EF-hand_9  EF-hand domain
    1.8e-06   27.1   0.4      0.024   14.2   0.0    3.3  4  EF-hand_1  EF hand
    0.00036   20.3   0.0     0.0084   15.9   0.0    2.4  2  EF-hand_8  EF-hand domain pair


Domain annotation for each model (and alignments):
>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00019       0.7       5      43 ..       7      39 ..       4      63 .. 0.74
   2 !   25.3   0.0   4.5e-09   1.6e-05       5      63 ..      77     129 ..      76     136 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00019
   EF-hand_7  5 keaFkelDtdgdgyldkeellrllrkifqgagegsklsd 43
                +eaF ++D++g+ ++ ke l +llr+     + +++ + 
  KHJ31915.1  7 REAFALFDKRGTQRVQKESLGDLLRA-----CGQNP-TL 39
                689**********************8.....44444.33 PP

  == domain 2  score: 25.3 bits;  conditional E-value: 4.5e-09
   EF-hand_7   5 kea.FkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisf 63 
                 +++ F+ +D+d +g++ + +l+ +l+        g+k+sd+e+++l+k ++ ++ G+i++
  KHJ31915.1  77 YCRgFQVFDKDMTGFIGVGQLRYILT------NLGEKMSDDEVDELLKAVNVSS-GEINY 129
                 6788******************9999......89**************999876.66666 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   2.9e-06      0.01       2      29 ..       6      32 ..       5      35 .. 0.92
   2 !   15.4   0.1   3.6e-06     0.013       6      31 .]      81     105 ..      78     106 .. 0.94
   3 ?   -2.9   0.0       2.6   9.2e+03      20      27 ..     114     121 ..     112     125 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 2.9e-06
   EF-hand_6  2 lreaFklfDkdgdGkidaeElrkalrka 29
                 reaF lfDk g+  + +e l ++lr a
  KHJ31915.1  6 YREAFALFDKRGTQRVQKESLGDLLR-A 32
                59***********************9.5 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 3.6e-06
   EF-hand_6   6 FklfDkdgdGkidaeElrkalrkalg 31 
                 F+ fDkd +G+i   +lr +l+ +lg
  KHJ31915.1  81 FQVFDKDMTGFIGVGQLRYILT-NLG 105
                 99*******************9.776 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 2.6
   EF-hand_6  20 eElrkalr 27 
                 +El ka +
  KHJ31915.1 114 DELLKAVN 121
                 78888765 PP

>> EF-hand_9  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   1.3e-05     0.046       3      62 ..       9      62 ..       7      64 .. 0.83
   2 !   13.3   0.0   2.2e-05     0.078       4      42 ..      81     118 ..      79     127 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.3e-05
   EF-hand_9  3 vFevcDtqktGrVpvsrlidyLravtaqdpeeseLeelakelDPdgedasvdldtflrvm 62
                 F ++D   t rV+   l d+Lra+++ +p+ +e+ el  ++     +a+ d++tf +++
  KHJ31915.1  9 AFALFDKRGTQRVQKESLGDLLRACGQ-NPTLAEIKELELNA-----GAEFDFETFSKIL 62
                599************************.99999998887654.....4677788877776 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 2.2e-05
   EF-hand_9   4 FevcDtqktGrVpvsrlidyLravtaqdpeeseLeelak 42 
                 F+v+D + tG + v +l  +L   ++ + ++ e++el k
  KHJ31915.1  81 FQVFDKDMTGFIGVGQLRYILTNLGE-KMSDDEVDELLK 118
                 9*************************.555667777765 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   0.00021      0.74       3      28 ..       7      32 ..       5      33 .. 0.89
   2 !   14.2   0.0   6.7e-06     0.024       6      28 ..      81     103 ..      76     104 .. 0.90
   3 ?   -3.0   0.0         2   7.2e+03      20      24 ..     114     118 ..     108     120 .. 0.52
   4 ?   -1.7   0.0      0.78   2.8e+03      14      23 ..     124     133 ..     123     136 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00021
                HHHHHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1  3 keiFrefDkDgdGkIdfeEfkellkk 28
                +e+F++fDk g+ ++ +e + +ll++
  KHJ31915.1  7 REAFALFDKRGTQRVQKESLGDLLRA 32
                89*************99999999875 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 6.7e-06
                 HHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1   6 FrefDkDgdGkIdfeEfkellkk 28 
                 F++fDkD +G+I   +++ +l+ 
  KHJ31915.1  81 FQVFDKDMTGFIGVGQLRYILTN 103
                 9*****************99986 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 2
                 HHHHH CS
   EF-hand_1  20 eEfke 24 
                 +E+++
  KHJ31915.1 114 DELLK 118
                 44443 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 0.78
                 SSEEEHHHHH CS
   EF-hand_1  14 dGkIdfeEfk 23 
                 +G I++ +++
  KHJ31915.1 124 SGEINYIDLV 133
                 7999987766 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.058   2.1e+02       3      15 ..      51      64 ..      49      77 .. 0.82
   2 !   15.9   0.0   2.3e-06    0.0084       2      35 ..      89     120 ..      88     135 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.058
   EF-hand_8  3 gkItreelrril.r 15
                 + ++e++++il r
  KHJ31915.1 51 AEFDFETFSKILnR 64
                6789******9966 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 2.3e-06
   EF-hand_8   2 kgkItreelrrilrilglkkglseeevdilfref 35 
                 +g I +  lr il+ lg k  +s++evd+l++++
  KHJ31915.1  89 TGFIGVGQLRYILTNLGEK--MSDDEVDELLKAV 120
                 799**********999*99..**********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1083.22
//
Query:       KHJ31916.1  [L=1187]
Description: putative filamentation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-12   45.5   6.1      0.016   15.3   0.3    6.7  7  TPR_2       Tetratricopeptide repeat
    2.2e-09   37.3   4.8      0.018   15.8   0.1    6.3  6  TPR_14      Tetratricopeptide repeat
    5.4e-09   36.4   0.1     0.0089   16.5   0.0    4.5  4  TPR_19      Tetratricopeptide repeat
    1.8e-08   33.9   5.1       0.83    9.6   0.1    6.8  7  TPR_1       Tetratricopeptide repeat
      4e-08   32.8   5.8     0.0086   16.2   0.1    6.2  6  TPR_8       Tetratricopeptide repeat
    8.1e-06   26.0   3.6         30    5.0   0.0    6.9  8  TPR_12      Tetratricopeptide repeat
    1.8e-05   24.8   1.3      0.051   14.0   0.1    3.8  3  TPR_17      Tetratricopeptide repeat
     0.0024   18.5   1.6         16    6.2   0.0    4.8  5  TPR_16      Tetratricopeptide repeat
     0.0052   16.7   3.9        3.3    8.0   0.1    5.3  6  TPR_7       Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.022   14.9   0.1         15    5.9   0.1    3.4  3  TPR_9       Tetratricopeptide repeat
       0.41   11.4   1.7         17    6.4   0.0    3.1  2  TPR_4       Tetratricopeptide repeat
       0.49   10.2   2.2         23    4.7   0.4    2.8  2  ATP-synt_D  ATP synthase subunit D


Domain annotation for each model (and alignments):
>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       7.4   1.1e+04       5      21 ..     109     125 ..     106     127 .. 0.78
   2 ?    0.5   0.0      0.57   8.5e+02      19      28 ..     516     525 ..     514     526 .. 0.89
   3 !    9.3   0.0   0.00088       1.3       1      28 [.     535     562 ..     535     564 .. 0.95
   4 ?    2.7   0.0      0.12   1.7e+02       3      31 ..     590     618 ..     588     621 .. 0.90
   5 ?    5.2   0.0     0.018        27       2      30 ..     906     934 ..     905     936 .. 0.92
   6 !    8.6   0.0    0.0015       2.3       2      34 .]     969    1001 ..     968    1001 .. 0.91
   7 !   15.3   0.3     1e-05     0.016       2      23 ..    1140    1161 ..    1139    1162 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 7.4
       TPR_2   5 ynlGlayyklgdyeeAl 21 
                  +l  +y+ +g+ + Al
  KHJ31916.1 109 VCLSTIYWLQGETALAL 125
                 57888999999988886 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.57
       TPR_2  19 eAleafekAl 28 
                 +A+e+f+k+l
  KHJ31916.1 516 KAIECFNKSL 525
                 8*******98 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00088
       TPR_2   1 aealynlGlayyklgdyeeAleafekAl 28 
                 +e l++lG++++++ + + A++a + Al
  KHJ31916.1 535 PETLFALGCLLAERRQIDAAIRAIKTAL 562
                 689**********************998 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.12
       TPR_2   3 alynlGlayyklgdyeeAleafekAleld 31 
                 +++ ++l++ +++++  Al+ +e A el 
  KHJ31916.1 590 LWHLMALLLSARQQFTLALKSCEGAFELL 618
                 699*******************9998885 PP

  == domain 5  score: 5.2 bits;  conditional E-value: 0.018
       TPR_2   2 ealynlGlayyklgdyeeAleafekAlel 30 
                 +++  +G  y+++  y++A  a ++Al+l
  KHJ31916.1 906 KVWLLIGGFYRRASMYDDAQGAIDEALQL 934
                 578999999******************98 PP

  == domain 6  score: 8.6 bits;  conditional E-value: 0.0015
       TPR_2    2 ealynlGlayyklgdyeeAleafekAleldPnn 34  
                  +++ +lG+++++ g +  A+++fe Al +  n+
  KHJ31916.1  969 DIYSELGYLAIEEGSPHSAINHFESALLHFRNH 1001
                  5799***********************988775 PP

  == domain 7  score: 15.3 bits;  conditional E-value: 1e-05
       TPR_2    2 ealynlGlayyklgdyeeAlea 23  
                  ea+++l++ay+++g++e+A+e 
  KHJ31916.1 1140 EAWFALARAYEESGQLEKAKEV 1161
                  8******************985 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       5.1   7.6e+03       2      21 ..     106     125 ..     105     128 .. 0.84
   2 ?    2.1   0.1       0.3   4.5e+02       3      28 ..     537     562 ..     535     573 .. 0.77
   3 ?    2.9   0.0      0.17   2.5e+02       3      30 ..     590     617 ..     588     625 .. 0.86
   4 !    7.1   0.1    0.0078        12       3      30 ..     907     934 ..     905     937 .. 0.93
   5 ?    4.6   0.0     0.048        71       4      37 ..     971    1004 ..     968    1010 .. 0.84
   6 !   15.8   0.1   1.2e-05     0.018       2      30 ..    1140    1168 ..    1139    1178 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 5.1
      TPR_14   2 eallalaeallalGdpdeAi 21 
                 +a+ +l  +++ +G+++ A+
  KHJ31916.1 106 QAQVCLSTIYWLQGETALAL 125
                 68889999*******99886 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.3
      TPR_14   3 allalaeallalGdpdeAiallrral 28 
                  l al+ +l+++++ d+Ai++ + al
  KHJ31916.1 537 TLFALGCLLAERRQIDAAIRAIKTAL 562
                 55666667999***********9996 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.17
      TPR_14   3 allalaeallalGdpdeAiallrralal 30 
                 ++ ++a +l a++++  A++ ++ a +l
  KHJ31916.1 590 LWHLMALLLSARQQFTLALKSCEGAFEL 617
                 7999*****************9988775 PP

  == domain 4  score: 7.1 bits;  conditional E-value: 0.0078
      TPR_14   3 allalaeallalGdpdeAiallrralal 30 
                 ++l+++ +++++  +d+A  + ++al+l
  KHJ31916.1 907 VWLLIGGFYRRASMYDDAQGAIDEALQL 934
                 79***********************985 PP

  == domain 5  score: 4.6 bits;  conditional E-value: 0.048
      TPR_14    4 llalaeallalGdpdeAiallrralalaPddaea 37  
                  + +l+ +  + G p  Ai++++ al ++ +++ a
  KHJ31916.1  971 YSELGYLAIEEGSPHSAINHFESALLHFRNHPNA 1004
                  67899999****************9988776655 PP

  == domain 6  score: 15.8 bits;  conditional E-value: 1.2e-05
      TPR_14    2 eallalaeallalGdpdeAiallrralal 30  
                  ea+ ala+a++++G++++A ++l ++++l
  KHJ31916.1 1140 EAWFALARAYEESGQLEKAKEVLWWCVEL 1168
                  89********************9888875 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.12   1.8e+02      21      55 ..     531     565 ..     523     572 .. 0.86
   2 ?   -1.2   0.0         2   2.9e+03      37      49 ..     924     936 ..     912     946 .. 0.75
   3 !   10.9   0.0   0.00034      0.51       1      36 [.     978    1013 ..     978    1015 .. 0.94
   4 !   16.5   0.0     6e-06    0.0089      23      48 ..    1137    1162 ..    1120    1162 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.12
      TPR_19  21 dpknaearllLAeallalgqldeAealLdalpeed 55 
                 + +n+e + +L  +l +  q+d+A+++++++++++
  KHJ31916.1 531 SSNNPETLFALGCLLAERRQIDAAIRAIKTALLST 565
                 678999999999999999********999999876 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 2
      TPR_19  37 algqldeAealLd 49 
                 a+g +deA +l++
  KHJ31916.1 924 AQGAIDEALQLVN 936
                 4566666666665 PP

  == domain 3  score: 10.9 bits;  conditional E-value: 0.00034
      TPR_19    1 llaegdyaeAlalleqalqedpknaearllLAeall 36  
                  +++eg + +A++++e+al +  ++++a  +L ++l+
  KHJ31916.1  978 AIEEGSPHSAINHFESALLHFRNHPNAIVGLSNILM 1013
                  689****************************99886 PP

  == domain 4  score: 16.5 bits;  conditional E-value: 6e-06
      TPR_19   23 knaearllLAeallalgqldeAealL 48  
                  +++ea+ +LA+a+ ++gql++A+++L
  KHJ31916.1 1137 NQSEAWFALARAYEESGQLEKAKEVL 1162
                  589*********************98 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       9.1   1.4e+04       4      21 ..     158     175 ..     156     178 .. 0.81
   2 ?    2.9   0.0     0.072   1.1e+02      19      28 ..     516     525 ..     515     526 .. 0.90
   3 !    5.7   0.0    0.0094        14       2      28 ..     536     562 ..     535     563 .. 0.93
   4 ?    1.7   0.0      0.17   2.5e+02       3      25 ..     590     612 ..     588     618 .. 0.89
   5 ?    3.4   0.0      0.05        74       2      30 ..     906     934 ..     905     934 .. 0.93
   6 !    5.7   0.0    0.0094        14       2      33 ..     969    1000 ..     968    1001 .. 0.90
   7 !    9.6   0.1   0.00055      0.83       2      23 ..    1140    1161 ..    1139    1169 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 9.1
                 HHHHHHHHHHTT-HHHHH CS
       TPR_1   4 lynlGnayfklgkydeAl 21 
                  y +G +++k   + eAl
  KHJ31916.1 158 SYIKGILLQKESAHMEAL 175
                 577999999999999997 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.072
                 HHHHHHHHHH CS
       TPR_1  19 eAleyyekAL 28 
                 +A+e+++k L
  KHJ31916.1 516 KAIECFNKSL 525
                 8*******98 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.0094
                 HHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekAL 28 
                 ++l+ lG ++ +  + d A+ + + AL
  KHJ31916.1 536 ETLFALGCLLAERRQIDAAIRAIKTAL 562
                 78999******************9998 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.17
                 HHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_1   3 alynlGnayfklgkydeAleyye 25 
                  +  +++++   +++  Al+ +e
  KHJ31916.1 590 LWHLMALLLSARQQFTLALKSCE 612
                 58999***************998 PP

  == domain 5  score: 3.4 bits;  conditional E-value: 0.05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALel 30 
                 k++  +G  y++  +yd+A  + ++AL+l
  KHJ31916.1 906 KVWLLIGGFYRRASMYDDAQGAIDEALQL 934
                 789999999******************97 PP

  == domain 6  score: 5.7 bits;  conditional E-value: 0.0094
                  HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1    2 kalynlGnayfklgkydeAleyyekALelnPn 33  
                  +++  lG++  + g +  A+ ++e AL +  n
  KHJ31916.1  969 DIYSELGYLAIEEGSPHSAINHFESALLHFRN 1000
                  7899**********************977665 PP

  == domain 7  score: 9.6 bits;  conditional E-value: 0.00055
                  HHHHHHHHHHHHTT-HHHHHHH CS
       TPR_1    2 kalynlGnayfklgkydeAley 23  
                  +a++ l+ ay + g++++A e 
  KHJ31916.1 1140 EAWFALARAYEESGQLEKAKEV 1161
                  8******************985 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       1.5   2.2e+03      19      28 ..     516     525 ..     514     526 .. 0.88
   2 ?    5.1   0.0     0.021        31       2      28 ..     536     562 ..     535     565 .. 0.93
   3 ?    1.8   0.1      0.24   3.6e+02       2      30 ..     589     617 ..     588     617 .. 0.91
   4 ?   -0.9   0.0       1.8   2.7e+03       2      29 ..     906     933 ..     905     934 .. 0.76
   5 ?    5.9   0.0     0.012        18       2      28 ..     969     995 ..     968     996 .. 0.93
   6 !   16.2   0.1   5.7e-06    0.0086       2      24 ..    1140    1162 ..    1139    1169 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 1.5
                 HHHHHHHHHH CS
       TPR_8  19 eAkeyyekal 28 
                 +A+e+++k l
  KHJ31916.1 516 KAIECFNKSL 525
                 8*******87 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.021
                 CHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekal 28 
                 e ++ lg+++ +  ++++A+ +++ al
  KHJ31916.1 536 ETLFALGCLLAERRQIDAAIRAIKTAL 562
                 6899*******************9997 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.24
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekalel 30 
                 +++++++++++  +++  A +++e a el
  KHJ31916.1 589 SLWHLMALLLSARQQFTLALKSCEGAFEL 617
                 58*********************999876 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 1.8
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekale 29 
                 ++++++g  y+    y+ A+ ++ +al+
  KHJ31916.1 906 KVWLLIGGFYRRASMYDDAQGAIDEALQ 933
                 6888999989888888888777777765 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.012
                 CHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekal 28 
                 ++y  lg++ ++ g  ++A+  +e al
  KHJ31916.1 969 DIYSELGYLAIEEGSPHSAINHFESAL 995
                 68999*******************997 PP

  == domain 6  score: 16.2 bits;  conditional E-value: 5.7e-06
                  CHHHHHHHHHHHTT-HHHHHHHH CS
       TPR_8    2 eayynlgsiylklgdyeeAkeyy 24  
                  ea++ l+++y++ g++e+Ake++
  KHJ31916.1 1140 EAWFALARAYEESGQLEKAKEVL 1162
                  89******************986 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       1.3   1.9e+03      22      47 ..      48      73 ..      43      76 .. 0.80
   2 ?   -1.1   0.0       1.6   2.4e+03       5      24 ..     107     126 ..     103     130 .. 0.64
   3 ?    0.7   0.0      0.44   6.6e+02      46      72 ..     536     562 ..     515     562 .. 0.72
   4 ?    4.1   0.0     0.039        58       4      33 ..     589     618 ..     586     624 .. 0.89
   5 ?   -2.6   0.0       4.7     7e+03      19      39 ..     673     693 ..     666     698 .. 0.79
   6 ?    4.6   0.0     0.027        41       5      33 ..     907     935 ..     903     942 .. 0.87
   7 ?    3.5   0.0      0.06        90       4      41 ..     969    1001 ..     966    1012 .. 0.75
   8 ?    5.0   0.0      0.02        30      45      67 ..    1139    1161 ..    1132    1167 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.3
      TPR_12 22 AlellekaleiarrllGpdhpltatt 47
                A++ + +alei++ + Gp  p  ++t
  KHJ31916.1 48 AESEHATALEIQQFINGPPLPSSLST 73
                8889999******9999877666655 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1.6
      TPR_12   5 alnnlaavlrrlgrydeAle 24 
                 a++ l ++++ +g+ + Al+
  KHJ31916.1 107 AQVCLSTIYWLQGETALALS 126
                 55666667777777666665 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.44
      TPR_12  46 ttlrnLgrlyralgryeeAlelleeal 72 
                 +tl++Lg l+ ++ + ++A+++ + al
  KHJ31916.1 536 ETLFALGCLLAERRQIDAAIRAIKTAL 562
                 479999999999999999998877765 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.039
      TPR_12   4 talnnlaavlrrlgrydeAlellekaleia 33 
                 ++++ +a++l ++++++ Al+ +e a e+ 
  KHJ31916.1 589 SLWHLMALLLSARQQFTLALKSCEGAFELL 618
                 57889********************99985 PP

  == domain 5  score: -2.6 bits;  conditional E-value: 4.7
      TPR_12  19 ydeAlellekaleiarrllGp 39 
                  d A+    ++l ++++l+G+
  KHJ31916.1 673 PDAAINESYEVLSLYTKLFGE 693
                 578888889999999999997 PP

  == domain 6  score: 4.6 bits;  conditional E-value: 0.027
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleia 33 
                 ++  ++ ++rr+  yd+A+   ++al+++
  KHJ31916.1 907 VWLLIGGFYRRASMYDDAQGAIDEALQLV 935
                 67789*********************997 PP

  == domain 7  score: 3.5 bits;  conditional E-value: 0.06
      TPR_12    4 talnnlaavlrrlgrydeAlellekaleiarrllGpdh 41  
                   ++++l+ +  + g  + A+ ++e al  +      +h
  KHJ31916.1  969 DIYSELGYLAIEEGSPHSAINHFESALLHF-----RNH 1001
                  678888888888899999999999998887.....445 PP

  == domain 8  score: 5.0 bits;  conditional E-value: 0.02
      TPR_12   45 attlrnLgrlyralgryeeAlel 67  
                  +++ ++L+r+y+++g++e+A e 
  KHJ31916.1 1139 SEAWFALARAYEESGQLEKAKEV 1161
                  678899**************875 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.0     0.008        12      10      33 ..     532     555 ..     528     556 .. 0.91
   2 ?   -0.3   0.1       1.2   1.8e+03      15      33 ..     590     608 ..     587     609 .. 0.86
   3 !   14.0   0.1   3.4e-05     0.051      11      34 .]    1137    1160 ..    1136    1160 .. 0.93

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.008
      TPR_17  10 PnnadaynnLAelllknGdlmtAr 33 
                  nn++ ++ L+ ll+++ + + A+
  KHJ31916.1 532 SNNPETLFALGCLLAERRQIDAAI 555
                 69****************999986 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 1.2
      TPR_17  15 aynnLAelllknGdlmtAr 33 
                 +++++A ll+ + ++  A+
  KHJ31916.1 590 LWHLMALLLSARQQFTLAL 608
                 7**********99987775 PP

  == domain 3  score: 14.0 bits;  conditional E-value: 3.4e-05
      TPR_17   11 nnadaynnLAelllknGdlmtArq 34  
                  n ++a++ LA+++++ G+l++A++
  KHJ31916.1 1137 NQSEAWFALARAYEESGQLEKAKE 1160
                  679*******************86 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       2.6   3.9e+03      36      55 ..     114     134 ..     111     138 .. 0.81
   2 ?    6.2   0.0     0.011        16       1      28 [.     539     566 ..     539     572 .. 0.87
   3 ?   -1.6   0.1       3.1   4.6e+03      13      56 ..     921     934 ..     914     938 .. 0.52
   4 ?    2.3   0.0      0.18   2.6e+02       3      31 ..     974    1002 ..     972    1011 .. 0.89
   5 ?    4.2   0.2     0.045        68      35      53 ..    1140    1158 ..    1137    1162 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 2.6
      TPR_16  36 AllllgdaalrqgrlaeAa.a 55 
                  ++l g+ al+++ l++ + +
  KHJ31916.1 114 IYWLQGETALALSSLPKEIhE 134
                 689999999999999988766 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.011
      TPR_16   1 lalaraalragdyddAaaaleaalkrdp 28 
                 +al+ +++++++ d+A++a ++al + +
  KHJ31916.1 539 FALGCLLAERRQIDAAIRAIKTALLSTS 566
                 589********************98884 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 3.1
      TPR_16  13 yddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaal 56 
                 yddA+                              g  +eA++l
  KHJ31916.1 921 YDDAQ------------------------------GAIDEALQL 934
                 55555..............................555555554 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.18
      TPR_16    3 laraalragdyddAaaaleaalkrdpssP 31  
                  l+++a++ g +  A++ +e al  ++ +P
  KHJ31916.1  974 LGYLAIEEGSPHSAINHFESALLHFRNHP 1002
                  89999*****************9998777 PP

  == domain 5  score: 4.2 bits;  conditional E-value: 0.045
      TPR_16   35 eAllllgdaalrqgrlaeA 53  
                  eA+++l++a+ + g l++A
  KHJ31916.1 1140 EAWFALARAYEESGQLEKA 1158
                  6888888888888888776 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       8.7   1.3e+04      17      26 ..     516     525 ..     515     525 .. 0.82
   2 ?    2.6   0.1      0.12   1.7e+02       1      29 [.     537     565 ..     537     582 .. 0.87
   3 ?   -0.7   0.0       1.3     2e+03       2      28 ..     591     617 ..     590     625 .. 0.80
   4 ?    1.7   0.0      0.23   3.4e+02       2      28 ..     908     934 ..     907     946 .. 0.85
   5 ?   -1.7   0.0       2.7     4e+03       5      30 ..     974    1000 ..     970    1003 .. 0.67
   6 !    8.0   0.1    0.0022       3.3       1      21 [.    1141    1161 ..    1141    1162 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 8.7
       TPR_7  17 eAielyeqsL 26 
                 +Aie++ +sL
  KHJ31916.1 516 KAIECFNKSL 525
                 8****98866 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.12
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLalt 29 
                 +L++L+ l  ++++ + Ai+  + +L  t
  KHJ31916.1 537 TLFALGCLLAERRQIDAAIRAIKTALLST 565
                 799******************99966444 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 1.3
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLal 28 
                 ++ +a l s+++++  A++ +e + +l
  KHJ31916.1 591 WHLMALLLSARQQFTLALKSCEGAFEL 617
                 6899***************99994444 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.23
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLal 28 
                 +l ++  y+r   y++A +   ++L+l
  KHJ31916.1 908 WLLIGGFYRRASMYDDAQGAIDEALQL 934
                 6789999**********9888887766 PP

  == domain 5  score: -1.7 bits;  conditional E-value: 2.7
       TPR_7    5 LarlysrlGdyeeAielyeqsL.altk 30  
                  L+ l  ++G    Ai ++e +L  +++
  KHJ31916.1  974 LGYLAIEEGSPHSAINHFESALlHFRN 1000
                  666666666677899999997766665 PP

  == domain 6  score: 8.0 bits;  conditional E-value: 0.0022
       TPR_7    1 aLlnLarlysrlGdyeeAiel 21  
                  a+++Lar+y++ G+ e+A e+
  KHJ31916.1 1141 AWFALARAYEESGQLEKAKEV 1161
                  789***************775 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.026        39      13      60 ..     516     566 ..     507     578 .. 0.78
   2 ?   -1.3   0.0       1.6   2.4e+03      34      58 ..     973     997 ..     970    1004 .. 0.79
   3 ?    5.9   0.1    0.0098        15      29      64 ..    1139    1174 ..    1134    1177 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.026
       TPR_9  13 ralavverllll...aPddpeerrdRGlllaqlGclsaAladLeaylalap 60 
                 +a+++ +  ll     ++ pe ++  G lla++ ++ aA+++  ++l  + 
  KHJ31916.1 516 KAIECFNKSLLPqfqSSNNPETLFALGCLLAERRQIDAAIRAIKTALLSTS 566
                 6666666666655556889999********************999996554 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.6
       TPR_9  34 dRGlllaqlGclsaAladLeaylal 58 
                 + G l  + G ++ A++ +e +l +
  KHJ31916.1 973 ELGYLAIEEGSPHSAINHFESALLH 997
                 6788889999999999999999865 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0098
       TPR_9   29 peerrdRGlllaqlGclsaAladLeaylalapdapd 64  
                   e ++  +++++++G+l++A + L ++++l++ +  
  KHJ31916.1 1139 SEAWFALARAYEESGQLEKAKEVLWWCVELEDGRGV 1174
                  5789***********************999987765 PP

>> TPR_4  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0      0.13   1.9e+02       3      21 ..     107     125 ..     106     128 .. 0.86
   2 ?    6.4   0.0     0.011        17       3      24 ..    1141    1162 ..    1139    1162 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.13
       TPR_4   3 allaLArallalGdldeAr 21 
                 a++ L   ++++G+ + A+
  KHJ31916.1 107 AQVCLSTIYWLQGETALAL 125
                 78889999********998 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.011
       TPR_4    3 allaLArallalGdldeArall 24  
                  a  aLAra+ + G+l+ A ++l
  KHJ31916.1 1141 AWFALARAYEESGQLEKAKEVL 1162
                  7889**************8876 PP

>> ATP-synt_D  ATP synthase subunit D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.4     0.016        23     172     195 ..     640     663 ..     638     664 .. 0.93
   2 ?    4.0   0.1     0.026        39      20      99 ..     807     890 ..     801     940 .. 0.68

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.016
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
  ATP-synt_D 172 tikyIkseLdEqereeffrlkkvk 195
                 +i++I  e+d  ere+  ++k+ +
  KHJ31916.1 640 EIQKIVNEMDNSERENLLQIKMTQ 663
                 79*******************987 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.026
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT.STSTTSTSHHHHHHHSSS.SS-..TSS-SEEEEEEBTTSEEEEE........E CS
  ATP-synt_D  20 kkKrdaLilefreilkelkelreeleeelkeayfs.laeafaaggeediesavlesvklakvvkvelktenvaGVkvpvf........e 99 
                  +K+d + +e   +l ++k+ r  + + + +++ s  ++a + ++++d+      s+kl+k+++ + ++en  +  +p++         
  KHJ31916.1 807 RRKSDTMNQEQLVLLTKIKTHRHMFSTSIDKSAPSdTTQASTHMTSSDVT-----SKKLVKSIEPSDSQENHQNPATPKLsscfnpaiV 890
                 79***************************988877255889999888888.....6666777777777777777777777444444440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       813  (0.0453455); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.77u 0.22s 00:00:00.99 Elapsed: 00:00:00.39
# Mc/sec: 9100.57
//
Query:       KHJ31917.1  [L=66]
Description: hypothetical protein EV44_g3805 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       172  (0.0095934); expected 358.6 (0.02)
Passed bias filter:                      151  (0.00842211); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.29u 0.23s 00:00:00.52 Elapsed: 00:00:00.34
# Mc/sec: 575.64
//
Query:       KHJ31918.1  [L=168]
Description: hypothetical protein EV44_g5120 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.091   12.6   0.1       0.26   11.1   0.0    1.8  2  ACT       ACT domain


Domain annotation for each model (and alignments):
>> ACT  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1      0.19   3.4e+03      24      38 ..      76      90 ..      74      95 .. 0.80
   2 ?   11.1   0.0   1.4e-05      0.26      19      64 ..     102     142 ..     101     145 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.19
                TTSEEEEEEEEEEST CS
         ACT 24 rgiNidsieqrssed 38
                ++ +++s ++ s+  
  KHJ31918.1 76 NNASVESFNSNSTTG 90
                799999999999865 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 1.4e-05
                 HHHHHTTSEEEEEEEEEESTTECEEEEEEEEEEHHHHHHHHHHHHT CS
         ACT  19 galadrgiNidsieqrssedkvagivfvvivvdeedleevlealkk 64 
                 + la+r+iN+ ++++++       ++++   + ++dl e+l+++kk
  KHJ31918.1 102 SKLAKRHINLLRASSSTGC-----YSNMGSDIHHKDLHEALNEVKK 142
                 669**************98.....5888888888888888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1699  (0.0947627); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.20s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1452.45
//
Query:       KHJ31919.1  [L=631]
Description: putative family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.9e-74  247.9   0.0    1.2e-73  247.5   0.0    1.1  1  ThiF             ThiF family
    3.8e-19   69.1   6.2      2e-18   66.8   3.5    2.8  2  UAE_UbL          Ubiquitin/SUMO-activating enzyme ubiquitin-l
    3.1e-07   30.6   8.1      7e-05   22.9   0.3    3.2  3  UBA_e1_thiolCys  Ubiquitin-activating enzyme active site
    0.00032   21.1   0.0     0.0011   19.3   0.0    1.9  1  NAD_binding_7    Putative NAD(P)-binding
  ------ inclusion threshold ------
      0.011   15.9   0.1      0.022   14.8   0.1    1.5  1  Shikimate_DH     Shikimate / quinate 5-dehydrogenase
      0.028   15.0   0.2       0.31   11.6   0.1    2.6  2  Pyr_redox        Pyridine nucleotide-disulphide oxidoreductas
       0.13   12.1   0.0       0.31   10.9   0.0    1.6  1  AAA_26           AAA domain


Domain annotation for each model (and alignments):
>> ThiF  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.5   0.0   4.7e-77   1.2e-73      16     220 ..      19     420 ..       6     443 .. 0.96

  Alignments for each domain:
  == domain 1  score: 247.5 bits;  conditional E-value: 4.7e-77
                 HHTSEEEEE--SHHHHHHHHHHHHHTTTEEEEEESSB--GGGGGTBTTS-GGGTTSBHHHHHHHHHHHT-TTSEEEEEES-CCGCCS-HHHHTT-SEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF  16 LrdskvllvGaGglGsellknLalsGvgkltlvDnDkielsNlnRqflfreediGkpKaevaaealqeinpdveveavteritdetvleellesvDlVv 114
                 ++++++l+vGaGg+G+ellknL+lsG+g++++vD D+i+lsNlnRqflfr+e+i+k+Ka va++a+q++np+v++ea+ ++it+  ++ e+++++ lV+
  KHJ31919.1  19 VKEARILVVGAGGIGCELLKNLVLSGFGEIHIVDLDTIDLSNLNRQFLFRQEHIKKSKALVAKDAAQKFNPNVKLEAYMANITEPLFNIEWFRGFTLVF 117
                 567*********************************************************************************99************* PP

                 EESSSHHHHHHHHHHHHHHT-EEEEEEEETTEEEEEEEEECCS-ECTSS-TGGS.EECCCCEEHHH................................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................. RF
        ThiF 115 dalDniearrlvnracvkkgiplieagtlgfegqvvviipgktgcyeCldpsstedptekkvplct................................. 180
                 +alDn++arr+vn++c+   iplie+gt gf+gqv+vi +g t+cy+C++     ++ +k++p+ct                                 
  KHJ31919.1 118 NALDNLQARRHVNKMCIAANIPLIESGTTGFNGQVQVIKKGVTACYDCMP-----KEIPKSFPICTirstpsqpihcivwaksyllneifgtseedsae 211
                 **************************************99*********5.....7889**************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
        ThiF 181 ................................................................................................... 180
                                                                                                                    
  KHJ31919.1 212 ifdqsddagnaeeienlkketlalrkirnamgsesfpkllfnkaynddierlrsmdnlwknrrapepldfmsiynqaiqsnkysieqvlkdiqriwnid 310
                 *************************************************************************************************** PP

                 .....................................................................HHHCT.E-B-HHHHHHHHHHHHHHHHHHHT CS
                 .....................................................................xxxxx.xxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 181 .....................................................................siagn.ipaiatttavvaglaalellklls 209
                                                                                      ++agn ipaiatt+a+vagl++l+  k+l+
  KHJ31919.1 311 enlivfidsldrlskrifemkslsdqafaepsiiifdkddedtldfvtananlrsavfgiemkskfdvkQMAGNiIPAIATTNAIVAGLCVLQSFKVLE 409
                 **************************************************************************************************9 PP

                 TBCGGGCCEEE CS
                 xxxxxxxxxxx RF
        ThiF 210 gkeklensllt 220
                 g   ++++++ 
  KHJ31919.1 410 GDFANTKEVFL 420
                 99888877774 PP

>> UAE_UbL  Ubiquitin/SUMO-activating enzyme ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.16   4.1e+02      56      82 ..      67      93 ..      46      97 .. 0.73
   2 !   66.8   3.5   7.8e-22     2e-18       2      87 ..     452     536 ..     451     538 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.16
     UAE_UbL 56 LaelgikngsiLtvdDfsqefkvnlvl 82
                  + +ik+++ L ++D  q+f+ n+ l
  KHJ31919.1 67 FRQEHIKKSKALVAKDAAQKFNPNVKL 93
                33346***************9888876 PP

  == domain 2  score: 66.8 bits;  conditional E-value: 7.8e-22
     UAE_UbL   2 kvdlskatlgdLvekvlkkeLgleepevsv.nggatilYlsseedeeeddnldkkLaelgikngsiLtvdDfsqe....fkvnlvlkhdee 87 
                 +vd++++tl++Lve++lk+ Lg++e e+++ +g + +lY     d +e+ nldkkL++lgi+++s+Ltv D++++    ++vnlvl+ +++
  KHJ31919.1 452 LVDVQNTTLQELVEDFLKSGLGYSE-EITInDGHDHLLY-----DIDETINLDKKLSDLGISDNSFLTVLDDNNDhengPRVNLVLTVNDS 536
                 79***********************.9999677788999.....999**********************99988778899******99887 PP

>> UBA_e1_thiolCys  Ubiquitin-activating enzyme active site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.1   8.5e-05      0.22       1      89 [.     183     263 ..     183     291 .. 0.67
   2 !   22.9   0.3   2.7e-08     7e-05     193     252 .]     322     379 ..     285     379 .. 0.74
   3 ?   -2.4   0.4       1.4   3.7e+03     159     220 ..     559     614 ..     537     623 .. 0.45

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 8.5e-05
  UBA_e1_thiolCys   1 PneieHtieWArd.kFeglFekkpeevnkflkdkekfleelekekeeekletlekvlkllvkerpktfedCvkwArekfeklFnnkikqL 89 
                      P++  H+i WA++   +++F  + e+  ++ ++++++ ++ e e+ ++++ +l+k+++++     ++f        + f+k +n++i+ L
       KHJ31919.1 183 PSQPIHCIVWAKSyLLNEIFGTSEEDSAEIFDQSDDAGNAEEIENLKKETLALRKIRNAM---GSESF------PKLLFNKAYNDDIERL 263
                      8999********9567999*9999999999955555544444444444444677777776...33333......3345666666666655 PP

  == domain 2  score: 22.9 bits;  conditional E-value: 2.7e-08
  UBA_e1_thiolCys 193 elaeeleklakkessla....lklkpieFeKDddtnfhidfitaasNlRArnYkIkeadrlkvK 252
                      +l + + ++++     +     + + i F+KDd++   +df+ta +NlR++ ++I+  ++++vK
       KHJ31919.1 322 RLSKRIFEMKSL----SdqafAEPSIIIFDKDDED--TLDFVTANANLRSAVFGIEMKSKFDVK 379
                      344444442222....123346788899*****99..79******************9999988 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 1.4
  UBA_e1_thiolCys 159 kvpefkpkekvkiavsdeeakeeeeeeedeeeleelaeeleklakkesslalklkpieFeKD 220
                      ++  f p++k   +  d+e k++ ++ ++    ++ +++ +++++ +s+   klk+  F  D
       KHJ31919.1 559 SLSPFIPRRKLPSTILDNEIKKDFTSVSN---SSTKRTHSPEISQ-TSN--KKLKAETFKND 614
                      44555555555555444444333222111...1111111111111.111..23444444444 PP

>> NAD_binding_7  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   4.5e-07    0.0011       5      89 ..      19     140 ..      16     145 .. 0.72

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 4.5e-07
  NAD_binding_7   5 lkgkkvlvvGgGevAarkvrklleag.akvtvvapevkeele..............elvklaeee............................le. 56 
                    +k+ ++lvvG+G ++ + +++l+ +g  ++++v+ ++ + ++              +       +                            ++ 
     KHJ31919.1  19 VKEARILVVGAGGIGCELLKNLVLSGfGEIHIVDLDTIDLSNlnrqflfrqehikkS-------KalvakdaaqkfnpnvkleaymaniteplFNi 107
                    57899********************9889*******633333544444444333330.......13333334455555555555555555555433 PP

  NAD_binding_7  57 kdlegadlviaatddrelneriaeaakarrilv 89 
                    +++ g+ lv+ a d+ + ++++ +++ a++i++
     KHJ31919.1 108 EWFRGFTLVFNALDNLQARRHVNKMCIAANIPL 140
                    77999*********************9999985 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.1   8.7e-06     0.022      10      52 ..      19      61 ..      11      82 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 8.7e-06
                  .TT-EEEEES-SHHHHHHHHHHHCCT-CEEEEEESSHHHHHHH CS
  Shikimate_DH 10 lkekkvlliGaGemaelvakhLlakgvkkvvvaNRtlerakel 52
                  +ke+++l++GaG ++ +++k+L+ +g+ ++ ++  +    ++l
    KHJ31919.1 19 VKEARILVVGAGGIGCELLKNLVLSGFGEIHIVDLDTIDLSNL 61
                  6899****************************97665555555 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   0.00012      0.31       1      28 [.      23      51 ..      23      65 .. 0.76
   2 ?   -0.3   0.0      0.65   1.7e+03      23      55 ..     476     506 ..     461     507 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00012
                EEEEECSSHHHHHHHHHH..HHTTSEEEEE CS
   Pyr_redox  1 kvvvvGgGyiglElAgal..aelgkkVtvv 28
                +++vvG+G ig+El ++l  + +g ++++v
  KHJ31919.1 23 RILVVGAGGIGCELLKNLvlSGFG-EIHIV 51
                79************9988444444.66666 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.65
                 SEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTE CS
   Pyr_redox  23 kkVtvversdkllrllDeeaskilqeklekngi 55 
                  ++t+ + +d+ll  +D +   +l +kl+++gi
  KHJ31919.1 476 EEITINDGHDHLL--YDIDETINLDKKLSDLGI 506
                 6899999999999..777777899999999998 PP

>> AAA_26  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00012      0.31      44     124 ..     256     337 ..     242     363 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00012
      AAA_26  44 ededselikellgldqtyelpeplalsaplspelaarqegedidlekivkelek..dadivvVEGagglgvpiteellnadia 124
                 +++d+e+++++ +l++++ +pepl +++ +++ +++++   ++ l++i +++++  ++ iv+++ ++ l++ i+e ++  d a
  KHJ31919.1 256 YNDDIERLRSMDNLWKNRRAPEPLDFMSIYNQAIQSNKYSIEQVLKDI-QRIWNidENLIVFIDSLDRLSKRIFEMKSLSDQA 337
                 57899*************************999999998888889999.998886577899************9987766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (631 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       843  (0.0470188); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 4567.83
//
Query:       KHJ31920.1  [L=265]
Description: putative 3-oxoacyl-acyl carrier protein reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-48  164.6   0.2    3.2e-48  163.8   0.2    1.4  1  adh_short        short chain dehydrogenase
    1.3e-47  162.3   3.0    1.5e-46  158.8   3.0    1.9  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
     0.0013   18.7   0.3      0.011   15.6   0.3    2.1  1  KR               KR domain
     0.0015   17.7   0.0     0.0024   17.0   0.0    1.3  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
     0.0047   16.4   0.1      0.013   15.0   0.0    1.7  2  Epimerase        NAD dependent epimerase/dehydratase family


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.8   0.2   8.8e-52   3.2e-48       3     192 ..      16     217 ..      14     220 .. 0.91

  Alignments for each domain:
  == domain 1  score: 163.8 bits;  conditional E-value: 8.8e-52
                 EEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT...TSEEEEEE-T..TTSHHHHHHHHHHHHHHH.......SSESEEEE---SS- CS
   adh_short   3 vlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee...gakalaiqvD..vtdreevealvekavkkl.......gkldvLvnNAGitg 89 
                 +l+tGas+GIG aiak++a+eG+ +++++r e++l++v +el      ++++ + + D  + + ++++ lv ++ ++        +++d+Lvn AGit+
  KHJ31920.1  16 ALITGASRGIGAAIAKRFAEEGILCLLAGRDEARLAQVRDELLMPnknSSHFSTGKKDneIDSCSSHRILVGNVGEENfwkqlkdDHIDILVNAAGITH 114
                 89***************************************987763344444444452255888999999999887667888999************* PP

                 -SSGGGCSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHH CS
   adh_short  90 sgpfselseeewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmak 188
                  +p   ++ + + +vi++Nl+g++l +r+v ++m+++++G I+nvsS  g+++  g aaY+AsKa+v+gltrsla el +++irvn+++PG++dTdm+k
  KHJ31920.1 115 YSPLCITNLNLVHEVIQTNLVGTLLGCRTVGKKMIARKGGCIINVSSLLGLKGGSGCAAYAASKAGVIGLTRSLAAELGRKNIRVNVIVPGYIDTDMTK 213
                 **************************************************************************************************9 PP

                 HHCT CS
   adh_short 189 elre 192
                 + ++
  KHJ31920.1 214 AMTP 217
                 8766 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.8   3.0   4.2e-50   1.5e-46       1     234 []      20     263 ..      20     263 .. 0.90

  Alignments for each domain:
  == domain 1  score: 158.8 bits;  conditional E-value: 4.2e-50
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGH.HHHHHHHHHHTTSE..E....EE--TTSHHHHHHHHHHHHHHH.......SSEEEEEE-----EGC CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneea.kkrveelaeelgae..v....lecDVtdeeqvealveevvekf.......gklDilvnnagiapkl 83 
                   Ga +gIG+aiAk++aeeG   +l+ ++e++ ++  +el    +++  +        + + ++ + lv +v e+        +++Dilvn+agi++  
    KHJ31920.1  20 GASRGIGAAIAKRFAEEGILCLLAGRDEARlAQVRDELLMPNKNSshFstgkKDNEIDSCSSHRILVGNVGEENfwkqlkdDHIDILVNAAGITHY- 115
                   999***************************76666666665553323456666667888888888999998764456667789*************. PP

                   SS-GGGH-HHHHHHHHHHHTHHHHHHHHHHHH..HCTSCCEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTG CS
  adh_short_C2  84 kgpfletsreefdraldvnlyslfllakaalp..lmkeggsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTla 178
                    +p+  t+ + +++++++nl +++l ++ + +  ++++gg i+n+ss+ + ++ ++ +ay+a+Ka++++ltr+lA+elg+k+iRvN++ pg+i+T++
    KHJ31920.1 116 -SPLCITNLNLVHEVIQTNLVGTLLGCRTVGKkmIARKGGCIINVSSLLGLKGGSGCAAYAASKAGVIGLTRSLAAELGRKNIRVNVIVPGYIDTDM 211
                   .*******************************8555667********************************************************** PP

                   GGGSTTHHHHHHHHHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTGG CS
  adh_short_C2 179 asgikgfdelleelearaplgrlgtpeevaeaalfLasdeasyitGqtlvvDgGlt 234
                   +++++  ++ + ++ +++p+gr+g ++e+a+aa+fLas++  y +  +lv DgGl+
    KHJ31920.1 212 TKAMT--PQARTHAIENIPIGRFGLVNEIADAAIFLASNK--YANNCVLVLDGGLS 263
                   ****8..99*****************************76..9***********85 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.3   3.2e-06     0.011       4     154 ..      17     179 ..      14     202 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.2e-06
                 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS.............--HHHHHHHHHHHHTT-.EEEE----TT-HHHHHHHHHHHHHHSS---EEEE--- CS
          KR   4 litGGlGgLGlelarwlaekgarhlvllsRsa...........aadedskaliaelealga.evevvaaDvsdkdavealleeikaeeppikGvihaAg 90 
                 litG+  g+G ++a+  ae+g   l l +R++            ++++s+++ +  +++++ +++  ++ v +    e+  +++k+  + i   ++aAg
  KHJ31920.1  17 LITGASRGIGAAIAKRFAEEGILCL-LAGRDEarlaqvrdellMPNKNSSHFSTGKKDNEIdSCSSHRILVGNV-GEENFWKQLKD--DHIDILVNAAG 111
                 9********************9876.679998455444444443333333333333332222222222222222.22444555553..458899***** PP

                 ------TTT--HHHHHHHHTTTTHHHHHHHHHTTT....S--SEEEEEEEHHHHH--TT-HHHHHHHH CS
          KR  91 vlrdklleemtaedleqvlapKvkGawnLhelled....esldffvlfSSiagllgsagqanYaaaNa 154
                 +++ ++l  ++ + +++v++  + G+    +++ +    ++   ++ +SS+ gl g  g a+Yaa  a
  KHJ31920.1 112 ITHYSPLCITNLNLVHEVIQTNLVGTLLGCRTVGKkmiaRKGGCIINVSSLLGLKGGSGCAAYAASKA 179
                 ********************99988766555554445549999*********************9865 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   6.8e-07    0.0024       2     113 ..      17     142 ..      16     161 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 6.8e-07
                      EEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH................-TTEEE..E....E--TT-HHHHHHHTT..T-SEEEE CS
  Polysacc_synt_2   2 lvtGagGsiGselvrqilkkkpkkiillerdElklyeieke..........leeelkkkklkv..eivpvigdvrdkerlekaleelkvdvvfh 83 
                      l+tGa+  iG ++ ++++++ +   +l  rdE +l ++++e          +++ +k+++++   +   ++g+v +++  ++ l++ ++d++++
       KHJ31920.1  17 LITGASRGIGAAIAKRFAEEGIL-CLLAGRDEARLAQVRDEllmpnknsshFSTGKKDNEIDScsSHRILVGNVGEENFWKQ-LKDDHIDILVN 108
                      8*****************99986.5689************987776655442223333444321123456788887766655.66699****** PP

                      ------H.HHHHHS...HHHHHHHHHHHHHHHHH CS
  Polysacc_synt_2  84 aAAlKhV.Plveen...pleaiktNvlgtenvie 113
                      aA + h  Pl+ +n   ++e+i+tN +gt   ++
       KHJ31920.1 109 AAGITHYsPLCITNlnlVHEVIQTNLVGTLLGCR 142
                      ***99954999876333589********986555 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   3.5e-06     0.013       1      95 [.      16     137 ..      16     151 .. 0.78
   2 ?   -2.3   0.0      0.68   2.4e+03     141     163 ..     173     195 ..     170     215 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 3.5e-06
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC.........................EEEE--TT-HHHHHHHHHHHT-SEEEE--S- CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl.........................elveldltdrsalerlfkeeqpdavihlAav 74 
                 +l+tGa+  iG+a++k+++e+g+ ++   r++ + ++ r+e l                         ++  +++ +++ +++l ++ ++d+ +++A++
  KHJ31920.1  16 ALITGASRGIGAAIAKRFAEEGILCLLAGRDEARLAQVRDE-LlmpnknsshfstgkkdneidscsshRILVGNVGEENFWKQLKDD-HIDILVNAAGI 112
                 59********************8888888884444444444.3699*********************99999999999999998776.9*********8 PP

                 --HH....HHHHSHHHHHHHHTHHH CS
   Epimerase  75 ggva....assedpadfieknlqgt 95 
                  +++    ++ +   ++i++nl+gt
  KHJ31920.1 113 THYSplciTNLNLVHEVIQTNLVGT 137
                 7776222223333344455555554 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.68
                 HHHHHHHHHHHHHHHHHHHHT-E CS
   Epimerase 141 pYaaaKlageklveayaaqygln 163
                 +Yaa+K+ +  l++++aa+ g +
  KHJ31920.1 173 AYAASKAGVIGLTRSLAAELGRK 195
                 68888888888888888877654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 1977.37
//
Query:       KHJ31921.1  [L=1685]
Description: hypothetical protein EV44_g1538 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   5.4e-202  661.8  36.3    2.7e-32  111.6   0.1    7.9  8  Clathrin         Region in Clathrin and VPS
    4.1e-32  109.9   1.0    1.3e-31  108.3   0.3    2.4  2  Clathrin_H_link  Clathrin-H-link
    3.6e-31  105.9   0.7    1.9e-05   24.7   0.1    6.8  6  Clathrin_propel  Clathrin propeller repeat
    2.6e-05   24.5   2.7         16    5.9   0.4    6.3  6  Vps39_1          Vacuolar sorting protein 39 domain 1
     0.0013   18.0   0.1     0.0034   16.7   0.1    1.8  1  Clathrin-link    Clathrin, heavy-chain linker
     0.0099   16.0   4.0        3.6    8.0   0.1    4.7  4  TPR_8            Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.015   15.4   5.0         13    6.2   0.1    6.1  6  TPR_2            Tetratricopeptide repeat
      0.033   14.0   2.8         27    4.8   0.1    4.9  4  TPR_1            Tetratricopeptide repeat
       0.08   13.1   0.1         18    5.4   0.0    3.2  3  Cytidylate_kin2  Cytidylate kinase-like family
       0.16   12.0   6.8         52    4.2   0.0    7.0  7  TPR_7            Tetratricopeptide repeat
       0.67   10.9  10.2    4.4e+02    2.2   0.4    8.0  7  TPR_14           Tetratricopeptide repeat
        0.9    8.5  10.5        0.6    9.1   0.4    4.0  5  Coatomer_WDAD    Coatomer WD associated region


Domain annotation for each model (and alignments):
>> Clathrin  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.1   3.1e+03      10      29 ..     491     510 ..     485     510 .. 0.89
   2 !   74.8   0.0   4.1e-24   6.2e-21       2     141 ..     545     687 ..     544     689 .. 0.91
   3 !   83.3   0.7   9.5e-27   1.4e-23       3     142 ..     698     836 ..     696     837 .. 0.94
   4 !   90.3   0.7   6.8e-29     1e-25       7     133 ..     850     972 ..     845     981 .. 0.94
   5 !  111.6   0.1   1.8e-35   2.7e-32       2     139 ..     991    1130 ..     990    1134 .. 0.97
   6 !  101.9   0.7   1.8e-32   2.6e-29       2     142 ..    1140    1278 ..    1139    1279 .. 0.96
   7 !  109.6   1.4   7.4e-35   1.1e-31       1     140 [.    1285    1427 ..    1285    1430 .. 0.97
   8 !  111.4   0.9   2.1e-35   3.2e-32       1     143 []    1434    1576 ..    1434    1576 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.1
                 CCCCHHHHHCTT-HHHHCHH CS
    Clathrin  10 lsrvvklfeeaglleelley 29 
                  ++vv +f e+g++e +l+y
  KHJ31921.1 491 APKVVAAFAETGQFEKILPY 510
                 689************99998 PP

  == domain 2  score: 74.8 bits;  conditional E-value: 4.1e-24
                 CCCCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTS..S---S-TTHHHHHHHT-SSHHHHHHHHHTTXT CS
    Clathrin   2 ieltdpidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflk..knnnydlekvaklcekadlyeeavilykkine 98 
                 +e+   +d++rvv+ f+++g+ + ++ +L ++lke+++e+ +lqt+lle+++ + + q+++++l   ++++yd++++a+lce+a+l ++a++++++ + 
  KHJ31921.1 545 NEAGSLVDIERVVDVFQSQGMVQPATAFLLDALKENKPEQAHLQTRLLEMNLINAP-QVADAILGndMFSHYDRARIAQLCEQAGLLQRALEHFDDPES 642
                 5777889************************************************6.****************************************** PP

                 HSSHSSXSSSSHCSCHHH..HTTTTTXXSHHHHHHHHHHHSSXSH CS
    Clathrin  99 fkkaisllkklkdfddai..eyaakvsnpelwekllealldkkpf 141
                 +k+ i+ +    +f +++   +++++s +  +++l  +l  + ++
  KHJ31921.1 643 IKRIIVNIVAIPNFSQDWlvGFFGRLSLELSLSCLEAMLKTNIRQ 687
                 ***999788888898888888998888888888777777666665 PP

  == domain 3  score: 83.3 bits;  conditional E-value: 9.5e-27
                 CCCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---S-TTHHHHHHHT-SSHHHHHHHHHT..TXTH CS
    Clathrin   3 eltdpidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnnydlekvaklcekadlyeeavilykk..inef 99 
                 +++d +  sr+++lfe+++  e l++yL ++ + +  e+p+++ +++e++ k ++++e+e++++++n+y++ekv +++++a+l+e+++++  +  +n++
  KHJ31921.1 698 KYSDLLLPSRLIDLFEKYNTAEGLYYYLGSIFNVS--EDPDVHFKYIEAATKIGQYSEVERICRESNYYNPEKVKNFLKEAKLTEQLPLIIVCdrFNFI 794
                 67888889************************765..99**************************************************888888**** PP

                 SSHSSXSSSSHCSCHHHHTTTTTXXSHHHHHHHHHHHSSXSHH CS
    Clathrin 100 kkaisllkklkdfddaieyaakvsnpelwekllealldkkpfe 142
                 ++++  + + ++  + ie+++++ np+  + +++ lld +++e
  KHJ31921.1 795 HDLVL-YLYQNQQFKSIEVYVQRVNPARTPAVISGLLDVDCDE 836
                 **886.8888999999**********************99986 PP

  == domain 4  score: 90.3 bits;  conditional E-value: 6.8e-29
                 TS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---S-TTHHHHHHHT-SSHHHHHHHHHTTXTHSSHSSX CS
    Clathrin   7 pidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnnydlekvaklcekadlyeeavilykkinefkkaisl 105
                  ++++++v ++e++++l++ll++Le+ l  +++   a+ +al+++y+++++  ++e+flk+n++yd+  v+k+cek+d+  +a+i y+k +++ +++++
  KHJ31921.1 850 LVPIDELVAEVESRNRLKLLLPFLEASLVAGNQR-EAVCNALAKIYIDSNN--NPEKFLKENDQYDPLIVGKYCEKRDPN-LAFISYRKGQNDLELVNI 944
                 6799************************877666.9**************7..***************************.****************** PP

                 SSSSHCSCHHHHTTTTTXXSHHHHHHHH CS
    Clathrin 106 lkklkdfddaieyaakvsnpelweklle 133
                 ++++++f+ +++y+ ++ +++lw+++l+
  KHJ31921.1 945 TNENSMFKAQARYLLERADKDLWAFVLS 972
                 *************************997 PP

  == domain 5  score: 111.6 bits;  conditional E-value: 1.8e-35
                  CCCCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS..--HHHHHHHHHHHHHTT-HHHHHHTTSS---S-TTHHHHHHHT-SSHHHHHHHHHTT CS
    Clathrin    2 ieltdpidlsrvvklfeeaglleelleyLekvlkedsk..enpalqtallelyakyddpqeleeflkknnnydlekvaklcekadlyeeavilykki 96  
                  +e+t+p+ +s  v  f  a+l+ el+e+Lek+++e s+  +n +lq++l+ ++ k+d+ +++++++ +++ y+ + +a++c + +lyeea+++ykki
  KHJ31921.1  991 PESTEPDKVSVAVASFLAADLPSELIELLEKIVLEPSPfsDNENLQNLLILTATKSDK-SKVMDYIGRLDAYNGPDIANICIEVGLYEEAFEVYKKI 1086
                  689*********************************99*******************9.************************************** PP

                  XTHSSHSSX.SSSSHCSCHHHHTTTTTXXSHHHHHHHHHHHSSX CS
    Clathrin   97 nefkkaisl.lkklkdfddaieyaakvsnpelwekllealldkk 139 
                  n++k a+++ +++  ++d+a eya++v+ pe+w+++++a+ld  
  KHJ31921.1 1087 NDHKSAANVlVEHIISIDRAQEYAERVDLPEVWSRIAKAQLDGL 1130
                  ********88******************************9975 PP

  == domain 6  score: 101.9 bits;  conditional E-value: 1.8e-32
                  CCCCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---S-TTHHHHHHHT-SSHHHHHHHHHTTXT CS
    Clathrin    2 ieltdpidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnnydlekvaklcekadlyeeavilykkine 98  
                  i ++d++++++v+++  +ag+ e l+++L++++k+    +pa++tal+  ya++++++ele+fl+ +n  d+e+ ++++  ++l++ a+i ++ i++
  KHJ31921.1 1140 IRAEDSSNYQEVIEISTHAGKDEDLIKFLRMARKTL--REPAIDTALAFSYARTNQLSELEDFLRGTNVADTEESGDKAYAEGLHQAAKIFFSSISN 1234
                  567899***************************755..55********************************************************* PP

                  HSSHSSXSSSSHCSCHHHHTTTTTXXSHHHHHHHHHHHSSXSHH CS
    Clathrin   99 fkkaisllkklkdfddaieyaakvsnpelwekllealldkkpfe 142 
                  ++k++++l +l++++ a+e a+k++n ++w+++ ea++dkk+f+
  KHJ31921.1 1235 WAKLATTLVYLEEYQSAVECARKANNIKVWKQVNEACIDKKEFR 1278
                  *****************************************986 PP

  == domain 7  score: 109.6 bits;  conditional E-value: 7.4e-35
                  CCCCCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---.S-TTHHHHHHHT-SSHHHHHHHHHTT CS
    Clathrin    1 lieltdpidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnn.ydlekvaklcekadlyeeavilykki 96  
                  l+++ d+++l+ +vk++e +g++eel+ +Le++l + +++++ ++t+l +++ ky++ ++++e++k +++ ++++k+++ ce+a+l+ e+++ly ++
  KHJ31921.1 1285 LNLIVDAEELQHLVKQYEWNGYFEELIHLLEQGL-GLERAHMGMFTELGITLSKYEP-SRVMEHIKLFWSrINIPKMIRACEEANLWPELIFLYCHY 1379
                  68899*****************************.999******************6.*************************************** PP

                  XTHSSHSS.X.SSSSHCSCHHH..HTTTTTXXSHHHHHHHHHHHSSXS CS
    Clathrin   97 nefkkais.l.lkklkdfddai..eyaakvsnpelwekllealldkkp 140 
                  +e+++a+  +  +  +++++    ++++kv n e+++++l+++l+++p
  KHJ31921.1 1380 DEWDNAALaMmERAADAWEHHSfkDIIVKVANLEIYYRALNFYLQQQP 1427
                  ********966**********************************987 PP

  == domain 8  score: 111.4 bits;  conditional E-value: 2.1e-35
                  CCCCCTTS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---S-TTHHHHHHHT-SSHHHHHH...HHH CS
    Clathrin    1 lieltdpidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnnydlekvaklcekadlyeeavi...lyk 94  
                  l+ lt++id++rvvk+fe+ +++++++++L +v+   s++ ++++ a++el+ +++d++ l++++++++nyd+  +a+++e +dl+ ++ i   +y+
  KHJ31921.1 1434 LQVLTPRIDVNRVVKMFEKSDNIPLIKPFLFSVQ---SQNKKSVNMAINELLMEEEDYKTLRDSVENYDNYDPVDLAQRLERHDLVFFRQIaasIYR 1527
                  6789******************************...8899******************************************************** PP

                  TTXTHSSHSSXSSSSHCSCHHHHTTTTTXXSHHHHHHHHHHHSSXSHHH CS
    Clathrin   95 kinefkkaisllkklkdfddaieyaakvsnpelwekllealldkkpfel 143 
                  k+++++k+i l+k++k+f+daie+aa + +++++e+ll++++d++ +e+
  KHJ31921.1 1528 KNKRWEKSIALSKQDKLFKDAIETAAISGKTDVVEELLHYFVDIGSREC 1576
                  *******************************************998775 PP

>> Clathrin_H_link  Clathrin-H-link
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.3   0.3   8.7e-35   1.3e-31       1      66 []     362     427 ..     362     427 .. 0.99
   2 ?   -3.8   0.0       8.6   1.3e+04       8      28 ..    1075    1095 ..    1074    1098 .. 0.82

  Alignments for each domain:
  == domain 1  score: 108.3 bits;  conditional E-value: 8.7e-35
  Clathrin_H_link   1 gLpGaddlyvqqFeqllaqgnykeAakvAaespqgiLRtpetIqrfkqvpaqpgqlspllqYFgtL 66 
                      gLpGaddly qqF+ql+++gny +Aak+Aa+sp+g+LRt++tI+rfk++p+ +gqls +lqYFg+L
       KHJ31921.1 362 GLPGADDLYAQQFDQLMNSGNYTDAAKIAANSPRGFLRTTQTIERFKALPQVAGQLSIILQYFGML 427
                      8****************************************************************8 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 8.6
  Clathrin_H_link    8 lyvqqFeqllaqgnykeAakv 28  
                       ly + Fe + + ++ k+Aa+v
       KHJ31921.1 1075 LYEEAFEVYKKINDHKSAANV 1095
                       788889999999999999988 PP

>> Clathrin_propel  Clathrin propeller repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0     7e-05       0.1       4      36 ..      24      59 ..      21      60 .. 0.87
   2 !    6.3   0.0    0.0089        13       5      36 ..      68      98 ..      66      99 .. 0.92
   3 !   24.7   0.1   1.3e-08   1.9e-05       3      35 ..     157     192 ..     155     194 .. 0.96
   4 !   11.9   0.0   0.00015      0.23       2      37 .]     206     241 ..     205     241 .. 0.92
   5 !   24.5   0.0   1.5e-08   2.3e-05       6      37 .]     263     294 ..     259     294 .. 0.94
   6 !   17.4   0.0   2.6e-06    0.0039       1      37 []     302     336 ..     302     336 .. 0.97

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 7e-05
                     CEEEECCCEEEEECCEEEEEE...CETEEEEEEEET CS
  Clathrin_propel  4 sqiinfptatneswlfiiain...gtkkGqvqlysv 36
                     ++ i+f ++t es+ +++++     ++   v+++++
       KHJ31921.1 24 QASIGFNSCTLESDSYVCVRDkkdEATSPDVVIIDL 59
                     689******************888888888888886 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0089
                     EEEECCCEEEEECCEEEEEE..CETEEEEEEEET CS
  Clathrin_propel  5 qiinfptatneswlfiiain..gtkkGqvqlysv 36
                     ++i++++a+++ +  iia++   ++   +q++++
       KHJ31921.1 68 KPIKADSAIMHWTRQIIALKaqSRT---LQIFDL 98
                     78*******************8888...999997 PP

  == domain 3  score: 24.7 bits;  conditional E-value: 1.3e-08
                      TCEEEECCCEEEEECCEEEEEE...CETEEEEEEEE CS
  Clathrin_propel   3 nsqiinfptatneswlfiiain...gtkkGqvqlys 35 
                      ++qiin++++ + +w +i++i+   g+++G +qlys
       KHJ31921.1 157 GCQIINYRVSNDGKWMVIVGISqqqGRVVGAMQLYS 192
                      79*********************************8 PP

  == domain 4  score: 11.9 bits;  conditional E-value: 0.00015
                      TTCEEEECCCEEEEECCEEEEEECETEEEEEEEETT CS
  Clathrin_propel   2 ansqiinfptatneswlfiiaingtkkGqvqlysve 37 
                      a++     ++a++    f + ++++++ ++++++v+
       KHJ31921.1 206 ASFGTLRLDGAPMDTKVFTFSVRTATGAKLHIVEVD 241
                      677788889*************************98 PP

  == domain 5  score: 24.5 bits;  conditional E-value: 1.5e-08
                      EEECCCEEEEECCEEEEEECETEEEEEEEETT CS
  Clathrin_propel   6 iinfptatneswlfiiaingtkkGqvqlysve 37 
                       ++fp+a+++s+ + i++  tk+G+++ly++e
       KHJ31921.1 263 VNDFPVAMQVSQRYSIIYLVTKYGFIHLYDLE 294
                      79****************************98 PP

  == domain 6  score: 17.4 bits;  conditional E-value: 2.6e-06
                      CTTCEEEECCCEEEEECCEEEEEECETEEEEEEEETT CS
  Clathrin_propel   1 nansqiinfptatneswlfiiaingtkkGqvqlysve 37 
                      n++s +++f t+++  + +i+++n  +kGqv+ +s++
       KHJ31921.1 302 NRISSETIFITVPDSESSGILGVN--RKGQVLAVSID 336
                      79999*******************..*********97 PP

>> Vps39_1  Vacuolar sorting protein 39 domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.12   1.8e+02      14      45 ..     751     782 ..     744     814 .. 0.88
   2 ?   -0.8   0.0       1.2   1.8e+03      41      67 ..    1075    1101 ..    1048    1116 .. 0.81
   3 ?   -2.7   0.0       4.8   7.1e+03      16      50 ..    1135    1169 ..    1132    1173 .. 0.82
   4 ?    5.9   0.0     0.011        16       1      33 [.    1180    1213 ..    1180    1237 .. 0.89
   5 ?    3.0   0.0     0.081   1.2e+02      35      75 ..    1362    1404 ..    1335    1419 .. 0.74
   6 ?    5.9   0.4      0.01        16       6      79 ..    1419    1497 ..    1414    1523 .. 0.71

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.12
     Vps39_1  14 pklvgpLlrleNaCdlkdveeiLkkekkykeL 45 
                  ++v  ++r +N+ ++++v+++Lk++k +++L
  KHJ31921.1 751 YSEVERICRESNYYNPEKVKNFLKEAKLTEQL 782
                 5788899999*************999988776 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.2
     Vps39_1   41 kykeLidlYygkklheeALeLlkelad 67  
                   y+e ++ Y++ + h++A ++l+e + 
  KHJ31921.1 1075 LYEEAFEVYKKINDHKSAANVLVEHII 1101
                  57788999**********999987654 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 4.8
     Vps39_1   16 lvgpLlrleNaCdlkdveeiLkkekkykeLidlYy 50  
                   +++ +r e  +++++v ei  ++ k ++Li++  
  KHJ31921.1 1135 SIASYIRAEDSSNYQEVIEISTHAGKDEDLIKFLR 1169
                  67788999999999999999999999999999875 PP

  == domain 4  score: 5.9 bits;  conditional E-value: 0.011
     Vps39_1    1 iDTaLlkvYlkt.kpklvgpLlrleNaCdlkdve 33  
                  iDTaL   Y++t + +++ ++lr  N  d++++ 
  KHJ31921.1 1180 IDTALAFSYARTnQLSELEDFLRGTNVADTEESG 1213
                  8***********7889*************99875 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.081
     Vps39_1   35 iLkkekkykeLidlY.ygkklheeALeLlkelade.deedeed 75  
                    ++++ + eLi lY ++ + +++AL ++++ ad+ ++++ +d
  KHJ31921.1 1362 ACEEANLWPELIFLYcHYDEWDNAALAMMERAADAwEHHSFKD 1404
                  5588999********5567889***********9854444444 PP

  == domain 6  score: 5.9 bits;  conditional E-value: 0.01
     Vps39_1    6 lkvYlktkpklvgpLlrle.NaCdlkdveeiLkkekkykeLid.lYygkklheeALeL.lkelade..deedeedsslk 79  
                  l  Yl+++p+l+ +Ll++   + d++ v ++ +k+ ++  +   l+  +++ ++++++ ++el  e  d +  +ds ++
  KHJ31921.1 1419 LNFYLQQQPALLTDLLQVLtPRIDVNRVVKMFEKSDNIPLIKPfLFSVQSQNKKSVNMaINELLMEeeDYKTLRDSVEN 1497
                  789*************998799************999975543468999********9445666643222333333333 PP

>> Clathrin-link  Clathrin, heavy-chain linker
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.1   2.3e-06    0.0034       1      24 []     337     360 ..     337     360 .. 0.96

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2.3e-06
  Clathrin-link   1 EdnIIPYIlntLnNpdLALrlAsR 24 
                    E n+IPY l++  N +LA++lAsR
     KHJ31921.1 337 EHNVIPYLLGNPANSSLAVKLASR 360
                    67*********************9 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       9.7   1.4e+04       6      24 ..     619     637 ..     618     638 .. 0.80
   2 ?   -0.7   0.0       1.5   2.3e+03       3      16 ..     886     899 ..     885     902 .. 0.86
   3 ?    5.1   0.0     0.021        31       7      26 ..    1066    1085 ..    1065    1087 .. 0.94
   4 !    8.0   0.1    0.0024       3.6       3      30 ..    1234    1261 ..    1232    1262 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 9.7
                 HHHHHHHHTT-HHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyy 24 
                 ++++++++ g ++ A e +
  KHJ31921.1 619 RIAQLCEQAGLLQRALEHF 637
                 6899999999999888766 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.5
                 HHHHHHHHHHHTT- CS
       TPR_8   3 ayynlgsiylklgd 16 
                 +++ l++iy++ ++
  KHJ31921.1 886 VCNALAKIYIDSNN 899
                 699******99876 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.021
                  HHHHHHHTT-HHHHHHHHHH CS
       TPR_8    7 lgsiylklgdyeeAkeyyek 26  
                  +++i+++ g yeeA e+y+k
  KHJ31921.1 1066 IANICIEVGLYEEAFEVYKK 1085
                  899***************99 PP

  == domain 4  score: 8.0 bits;  conditional E-value: 0.0024
                  HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_8    3 ayynlgsiylklgdyeeAkeyyekalel 30  
                   + +l+ ++  l++y++A+e+ +ka  +
  KHJ31921.1 1234 NWAKLATTLVYLEEYQSAVECARKANNI 1261
                  599*********************9665 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.9   4.4e+03      11      22 ..     377     388 ..     376     389 .. 0.88
   2 ?    2.1   0.1      0.18   2.7e+02       6      25 ..     619     638 ..     617     639 .. 0.92
   3 ?   -3.3   0.0       9.4   1.4e+04       3      16 ..     886     899 ..     885     901 .. 0.85
   4 ?    2.3   0.0      0.16   2.4e+02       7      26 ..    1066    1085 ..    1065    1086 .. 0.91
   5 ?    6.2   0.1    0.0089        13       4      27 ..    1235    1258 ..    1233    1261 .. 0.93
   6 ?   -0.5   0.0       1.2   1.8e+03       8      22 ..    1523    1537 ..    1522    1538 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.9
       TPR_2  11 yyklgdyeeAle 22 
                 ++++g+y +A++
  KHJ31921.1 377 LMNSGNYTDAAK 388
                 6899***99986 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.18
       TPR_2   6 nlGlayyklgdyeeAleafe 25 
                 +++++++++g +++Ale+f+
  KHJ31921.1 619 RIAQLCEQAGLLQRALEHFD 638
                 6899**************96 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 9.4
       TPR_2   3 alynlGlayyklgd 16 
                 ++++l+++y+ +++
  KHJ31921.1 886 VCNALAKIYIDSNN 899
                 6899*****98876 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.16
       TPR_2    7 lGlayyklgdyeeAleafek 26  
                  +++++++ g yeeA e ++k
  KHJ31921.1 1066 IANICIEVGLYEEAFEVYKK 1085
                  6899999***********98 PP

  == domain 5  score: 6.2 bits;  conditional E-value: 0.0089
       TPR_2    4 lynlGlayyklgdyeeAleafekA 27  
                  +  l+  + +l +y+ A+e+ +kA
  KHJ31921.1 1235 WAKLATTLVYLEEYQSAVECARKA 1258
                  788999*****************9 PP

  == domain 6  score: -0.5 bits;  conditional E-value: 1.2
       TPR_2    8 GlayyklgdyeeAle 22  
                  + +y+k++++e+ ++
  KHJ31921.1 1523 ASIYRKNKRWEKSIA 1537
                  679*********986 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1      0.15   2.3e+02       6      25 ..     619     638 ..     617     638 .. 0.92
   2 ?    2.9   0.0      0.07     1e+02       7      26 ..    1066    1085 ..    1065    1086 .. 0.93
   3 ?    4.8   0.1     0.018        27       4      27 ..    1235    1258 ..    1235    1258 .. 0.92
   4 ?   -1.1   0.0       1.3     2e+03       9      22 ..    1524    1537 ..    1523    1538 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.15
                 HHHHHHHHTT-HHHHHHHHH CS
       TPR_1   6 nlGnayfklgkydeAleyye 25 
                 ++++++ + g ++ Ale+++
  KHJ31921.1 619 RIAQLCEQAGLLQRALEHFD 638
                 799***************95 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.07
                  HHHHHHHTT-HHHHHHHHHH CS
       TPR_1    7 lGnayfklgkydeAleyyek 26  
                  ++n++ + g y+eA e y+k
  KHJ31921.1 1066 IANICIEVGLYEEAFEVYKK 1085
                  799***************98 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.018
                  HHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_1    4 lynlGnayfklgkydeAleyyekA 27  
                  +  l+ ++ +l++y+ A+e+ +kA
  KHJ31921.1 1235 WAKLATTLVYLEEYQSAVECARKA 1258
                  677999999************998 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 1.3
                  HHHHHTT-HHHHHH CS
       TPR_1    9 nayfklgkydeAle 22  
                   +y+k++++++ ++
  KHJ31921.1 1524 SIYRKNKRWEKSIA 1537
                  69********9885 PP

>> Cytidylate_kin2  Cytidylate kinase-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.059        88      25      71 ..     612     658 ..     600     703 .. 0.74
   2 ?    5.4   0.0     0.012        18      31      95 ..     899     964 ..     880     971 .. 0.80
   3 ?   -0.9   0.0       1.1   1.6e+03      35      67 ..    1068    1104 ..    1058    1182 .. 0.52

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.059
  Cytidylate_kin2  25 lpfydreiieevakelglseeeveevdersrlssflskllaarvagd 71 
                      +  ydr+ i+++++++gl +  +e++d+ +++++++ +++a   +++
       KHJ31921.1 612 FSHYDRARIAQLCEQAGLLQRALEHFDDPESIKRIIVNIVAIPNFSQ 658
                      5679************************7777888888877765554 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.012
  Cytidylate_kin2  31 eiieevakel.glseeeveevdersrlssflskllaarvagdtldeklddelfeaqervirelaae 95 
                      + +e+  ke+ + ++ +v +++e++  + ++ ++ +++   + ++ + ++++f+aq+r++ e a++
       KHJ31921.1 899 NNPEKFLKENdQYDPLIVGKYCEKRDPNLAFISYRKGQNDLELVNITNENSMFKAQARYLLERADK 964
                      556677777757778888*****9999**********9999999****************999866 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 1.1
  Cytidylate_kin2   35 evakelglseeeveevde....rsrlssflskllaar 67  
                        ++ e gl+ee +e +++    +s+++ +++++++ +
       KHJ31921.1 1068 NICIEVGLYEEAFEVYKKindhKSAANVLVEHIISID 1104
                       5566666666666444443223333333333333332 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       4.1   6.2e+03       7      20 ..     189     202 ..     189     203 .. 0.92
   2 ?    0.3   0.1      0.61     9e+02       4      22 ..     619     637 ..     618     639 .. 0.90
   3 ?   -0.8   0.0       1.4   2.1e+03       2      14 ..     887     899 ..     886     902 .. 0.86
   4 ?    4.2   0.0     0.035        52       5      24 ..    1066    1085 ..    1065    1098 .. 0.92
   5 ?    0.9   0.1      0.41   6.1e+02       5      24 ..    1238    1257 ..    1235    1259 .. 0.86
   6 ?    0.5   0.0      0.53     8e+02      13      29 ..    1305    1319 ..    1302    1334 .. 0.85
   7 ?   -0.7   0.0       1.3   1.9e+03       6      21 ..    1523    1538 ..    1522    1543 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 4.1
       TPR_7   7 rlysrlGdyeeAie 20 
                 +lysr+++ ++Aie
  KHJ31921.1 189 QLYSRDRNISQAIE 202
                 58**********97 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.61
       TPR_7   4 nLarlysrlGdyeeAiely 22 
                 ++a+l+++ G  ++A+e++
  KHJ31921.1 619 RIAQLCEQAGLLQRALEHF 637
                 689*************987 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.4
       TPR_7   2 LlnLarlysrlGd 14 
                 +++La +y + ++
  KHJ31921.1 887 CNALAKIYIDSNN 899
                 99******99886 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.035
       TPR_7    5 LarlysrlGdyeeAielyeq 24  
                  +a+++ ++G yeeA e+y++
  KHJ31921.1 1066 IANICIEVGLYEEAFEVYKK 1085
                  79****************98 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.41
       TPR_7    5 LarlysrlGdyeeAielyeq 24  
                  La + + l +y+ A+e+ ++
  KHJ31921.1 1238 LATTLVYLEEYQSAVECARK 1257
                  899999**********9766 PP

  == domain 6  score: 0.5 bits;  conditional E-value: 0.53
       TPR_7   13 GdyeeAielyeqsLalt 29  
                  G++ee+i l+eq  +l 
  KHJ31921.1 1305 GYFEELIHLLEQ--GLG 1319
                  89**********..553 PP

  == domain 7  score: -0.7 bits;  conditional E-value: 1.3
       TPR_7    6 arlysrlGdyeeAiel 21  
                  a++y++  ++e+ i l
  KHJ31921.1 1523 ASIYRKNKRWEKSIAL 1538
                  89**********9987 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.59   8.8e+02       3      24 ..     369     390 ..     367     393 .. 0.86
   2 ?    0.9   0.0      0.74   1.1e+03       9      42 ..     558     592 ..     555     594 .. 0.85
   3 ?    2.2   0.4       0.3   4.4e+02       5      26 ..     618     639 ..     616     639 .. 0.89
   4 ?   -1.6   0.0       4.6   6.9e+03       7      27 ..    1066    1086 ..    1065    1095 .. 0.84
   5 ?   -1.8   0.0       5.6   8.4e+03      13      35 ..    1157    1181 ..    1150    1191 .. 0.69
   6 ?    0.9   0.0      0.75   1.1e+03       4      27 ..    1235    1258 ..    1233    1264 .. 0.94
   7 ?    1.5   0.0      0.47   7.1e+02       2      29 ..    1292    1319 ..    1291    1332 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.59
      TPR_14   3 allalaeallalGdpdeAiall 24 
                 ++++  + l+++G++ +A++++
  KHJ31921.1 369 LYAQQFDQLMNSGNYTDAAKIA 390
                 67888999**********9975 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.74
      TPR_14   9 eallalGdpdeAiallrralala.Pddaeawllla 42 
                 +++  +G  + A a l +al+ + P++a ++++l 
  KHJ31921.1 558 DVFQSQGMVQPATAFLLDALKENkPEQAHLQTRLL 592
                 57788999*************97689999998886 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.3
      TPR_14   5 lalaeallalGdpdeAiallrr 26 
                 +++a++++++G +++A++++++
  KHJ31921.1 618 ARIAQLCEQAGLLQRALEHFDD 639
                 7889**************9975 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 4.6
      TPR_14    7 laeallalGdpdeAiallrra 27  
                  +a ++ + G ++eA ++++++
  KHJ31921.1 1066 IANICIEVGLYEEAFEVYKKI 1086
                  5778889999******99976 PP

  == domain 5  score: -1.8 bits;  conditional E-value: 5.6
      TPR_14   13 alGdpdeAiallrrala..laPdda 35  
                  ++G+ ++ i+ lr a +  + P+ +
  KHJ31921.1 1157 HAGKDEDLIKFLRMARKtlREPAID 1181
                  7899999999999997732344433 PP

  == domain 6  score: 0.9 bits;  conditional E-value: 0.75
      TPR_14    4 llalaeallalGdpdeAiallrra 27  
                  +++la  l  l++++ A++++r+a
  KHJ31921.1 1235 WAKLATTLVYLEEYQSAVECARKA 1258
                  999*****************9987 PP

  == domain 7  score: 1.5 bits;  conditional E-value: 0.47
      TPR_14    2 eallalaeallalGdpdeAiallrrala 29  
                  e l+ l++ ++ +G ++e i ll++ l 
  KHJ31921.1 1292 EELQHLVKQYEWNGYFEELIHLLEQGLG 1319
                  668899******************9875 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.3     0.042        63     116     169 ..      78     134 ..      42     144 .. 0.69
   2 ?   -3.5   0.0       2.6   3.9e+03     121     139 ..     281     299 ..     277     310 .. 0.81
   3 ?   -4.2   0.0       4.4   6.6e+03     295     324 ..     612     641 ..     583     642 .. 0.77
   4 ?    0.9   0.0      0.12   1.8e+02     335     400 ..    1102    1170 ..    1069    1188 .. 0.79
   5 ?    9.1   0.4    0.0004       0.6     335     371 ..    1247    1283 ..    1237    1316 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.042
                    X..XXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXX CS
  Coatomer_WDAD 116 g..GalLgvkseg.svsfYDweqgklvrridvkkvknVvwsd.dgelvalvskdtvyi 169
                        +++ +k ++ ++ ++D++ ++ +++ ++++   V+w+  + + + lv++++vy 
     KHJ31921.1  78 HwtRQIIALKAQSrTLQIFDLADKQKIKSTTMNE-DVVFWKWfSETSIGLVTETAVYH 134
                    354455555555547******************9.99999862577888999888885 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.6
                    XXXXXX.XXXXXXXXXXXX CS
  Coatomer_WDAD 121 gvksegsvsfYDweqgklv 139
                    +v++ g++++YD+e+g+ +
     KHJ31921.1 281 LVTKYGFIHLYDLETGTCI 299
                    6788899********9987 PP

  == domain 3  score: -4.2 bits;  conditional E-value: 4.4
                    .....XXXXXXXXXXXXXXXX-GGGSS-HH CS
  Coatomer_WDAD 295 ipkeegqkiirfLekkgypelAlqlvqDpe 324
                    +++  + +i++  e+ g ++ Al+   Dpe
     KHJ31921.1 612 FSHYDRARIAQLCEQAGLLQRALEHFDDPE 641
                    46778999999*************999997 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.12
                     -HHHHHHHHHHH--HHHHHHHHHHHHHTT-HHHHHHHHHHTT...-HHHHHHHHHHHT-HHHHHHHHHH CS
  Coatomer_WDAD  335 nLelAlelakelddeekWkkLgdaAlsqgniklaeeayqkak...dfdkLllLylstgnkekLkkLaki 400 
                      ++ A e a++ d +e+W+++++a l   +i+    +y +a+   ++++   + +  g+ e L k   +
     KHJ31921.1 1102 SIDRAQEYAERVDLPEVWSRIAKAQLDGLRISDSIASYIRAEdssNYQEVIEISTHAGKDEDLIKFLRM 1170
                     5889**********************9999988888887776222445555556666666666665555 PP

  == domain 5  score: 9.1 bits;  conditional E-value: 0.0004
                     -HHHHHHHHHHH--HHHHHHHHHHHHHTT-HHHHHHH CS
  Coatomer_WDAD  335 nLelAlelakelddeekWkkLgdaAlsqgniklaeea 371 
                     + + A+e+a+++++ ++Wk++ +a + + ++ la+ +
     KHJ31921.1 1247 EYQSAVECARKANNIKVWKQVNEACIDKKEFRLAQIC 1283
                     5578*******************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1685 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       832  (0.0464053); expected 358.6 (0.02)
Passed bias filter:                      600  (0.0334653); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 1.00u 0.30s 00:00:01.30 Elapsed: 00:00:00.45
# Mc/sec: 11258.06
//
Query:       KHJ31922.1  [L=231]
Description: hypothetical protein EV44_g1843 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.3e-30  103.7   0.5      1e-29  103.0   0.5    1.3  1  HCNGP     HCNGP-like protein
  ------ inclusion threshold ------
       0.04   13.5   0.2      0.054   13.1   0.2    1.2  1  DUF4221   Domain of unknown function (DUF4221)


Domain annotation for each model (and alignments):
>> HCNGP  HCNGP-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.0   0.5   1.1e-33     1e-29       1      92 [.     114     208 ..     114     210 .. 0.94

  Alignments for each domain:
  == domain 1  score: 103.0 bits;  conditional E-value: 1.1e-33
       HCNGP   1 iPpsppskcdpelqaKiekflklkkegvhfnerlassksfrNPsilekLvefvgi...deygtnlpkevwdphgfpeeayydalakaqkkerekr 92 
                 iPpsp+++ +++++aK+++fl+lkk+gvhfn++la+s++++NPs++++L++f++i    +y t+lpk++wdp +fp++a+ ++l+k+q+k+ + r
  KHJ31922.1 114 IPPSPKGSPSNSTEAKFNQFLELKKKGVHFNQKLARSTAIKNPSLMQSLMDFAEIdhsGQYVTTLPKSLWDPGAFPSHAFVEELNKSQQKILNLR 208
                 9*****9899*********************************************66559*****************************987655 PP

>> DUF4221  Domain of unknown function (DUF4221)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2     6e-06     0.054     102     195 ..      82     179 ..      74     205 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 6e-06
                 ESSSTTSEEEE.GGGTEEEEE-TT--EEEEEE---TTS-------BTTTTB--EEETTEEEEE---SSS...--GGGGGGSEEEEEEETTT--EEEEE CS
     DUF4221 102 qvldsiflllg.nafnelflfnesgekvkkinlesnelegeenefgsfvnspiaikdgklysgqrlkke...lngekiekikglaiidlktkkvklip 195
                  + ds+f +l+ +++n+++l n +  k+ ++++ ++++++  n+++  +n+ ++ k + + + q l  +   +n + +++  ++a id + + v ++p
  KHJ31922.1  82 LSEDSDFEMLSpYSKNRVILRNLTMSKQPNFEIPPSPKGSPSNSTEAKFNQFLELKKKGVHFNQKLARStaiKNPSLMQSLMDFAEIDHSGQYVTTLP 179
                 5678887777779***************************************************9733311133345677777888888877777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1768.29
//
Query:       KHJ31923.1  [L=189]
Description: putative duf1640 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-58  197.3  11.0    2.2e-58  197.2  11.0    1.0  1  DUF1640          Protein of unknown function (DUF1640)
  ------ inclusion threshold ------
       0.16   11.3   2.8       0.46    9.8   0.1    2.0  2  GNAT_acetyltr_2  GNAT acetyltransferase 2
       0.77   10.2  12.7       0.78   10.2   7.4    2.1  2  DUF1690          Protein of Unknown function (DUF1690)
          4    7.7   8.0        1.4    9.2   3.6    2.5  2  cwf21            cwf21 domain


Domain annotation for each model (and alignments):
>> DUF1640  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.2  11.0   4.9e-62   2.2e-58       1     175 []      14     188 ..      14     188 .. 1.00

  Alignments for each domain:
  == domain 1  score: 197.2 bits;  conditional E-value: 4.9e-62
     DUF1640   1 fDThalvrrLeekGftkeqAeaimsaltevlneslekvakslvskselekseylqkaalselrkevqisersefaalrseteklqreleklkqkLreei 99 
                 fDT+++v+rL+e+Gft++q+ a+m++l++v++es++++++++v ++e+ k++y+qk+++++lr+e+q+se +e a+ r+++e+l +++ kl+++Lr+ei
  KHJ31923.1  14 FDTLRFVQRLQEEGFTEAQSVAMMKVLSDVIEESIQNLTRTMVLREEQAKATYTQKVDFAKLRTELQSSEFTETATTRASHERLTNDIAKLNSRLRDEI 112
                 9************************************************************************************************** PP

     DUF1640 100 dklkadirldlnleKgrireelakleakiqelnnkidrevsalrteiEsvKldvikyliglvvgilavglavvRll 175
                 ++++a++rldlnleKgriree + +e ki+e+++ki++ev+ lr ++E vK++++++l+g+++g++a++l+++Rll
  KHJ31923.1 113 SRTQASVRLDLNLEKGRIREEANVQELKIKETETKIEQEVAGLREKLEGVKFQTLQWLMGVCTGTAALILGAWRLL 188
                 **************************************************************************96 PP

>> GNAT_acetyltr_2  GNAT acetyltransferase 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.9      0.03   1.3e+02     115     164 ..      35      84 ..       4     106 .. 0.61
   2 ?    9.8   0.1    0.0001      0.46     119     197 ..     103     185 ..      98     188 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.03
  GNAT_acetyltr_2 115 ralellekyyegklssleeeeekeeeeeeekeeeeeklsleeeklkprke 164
                      ++++ l++ +e+++++l+ +   +ee+++++ +++ +  + +++l++++ 
       KHJ31923.1  35 AMMKVLSDVIEESIQNLTRTMVLREEQAKATYTQKVDFAKLRTELQSSEF 84 
                      45777888888888888887777777776665555543333333333333 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.0001
  GNAT_acetyltr_2 119 llekyyegklssleeeeekeeeeeeekeeeee...klsleeeklkprkelpplllklseekpekldy.lgvsfGltseLlkFW 197
                      +l++ +  ++s+++++ + + + e+ + +ee+   +l+++e+++k ++e++ l  kl+ +k ++l++ +gv+ G +  +l  W
       KHJ31923.1 103 KLNSRLRDEISRTQASVRLDLNLEKGRIREEAnvqELKIKETETKIEQEVAGLREKLEGVKFQTLQWlMGVCTGTAALILGAW 185
                      56666666666666665555554444333333355888999999***********************55*****988777777 PP

>> DUF1690  Protein of Unknown function (DUF1690)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   7.4   0.00017      0.78      14     101 ..      20     117 ..      16     133 .. 0.74
   2 ?    3.1   0.6     0.027   1.2e+02      69      96 ..     133     163 ..     116     171 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00017
     DUF1690  14 vsqLessketda...sraqalekliqerVaeeLkkLraeeeetlkkfeeklekellkde.......adakdelsskalnekieeLrkkleefkkkeee 101
                 v++L+++  t+a      + l ++i+e +++  + +  +ee++ +   +k++ ++l +e       ++a++  s+++l+++i++L+++l +  +++++
  KHJ31923.1  20 VQRLQEEGFTEAqsvAMMKVLSDVIEESIQNLTRTMVLREEQAKATYTQKVDFAKLRTElqsseftETATTRASHERLTNDIAKLNSRLRDEISRTQA 117
                 55555554444432355566788888888887777777888888888888888888888888889988999******************986666554 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.027
     DUF1690  69 e...adakdelsskalnekieeLrkkleefk 96 
                 e   ++ k + ++++++++++ Lr+kle +k
  KHJ31923.1 133 EanvQELKIKETETKIEQEVAGLREKLEGVK 163
                 3333344556677888899999999998765 PP

>> cwf21  cwf21 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.34   1.5e+03      19      34 ..      22      48 ..      17      61 .. 0.55
   2 ?    9.2   3.6   0.00031       1.4      24      41 ..     107     159 ..      70     161 .. 0.68

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.34
       cwf21 19 eLEeeg...........lseeeIeerv 34
                +L eeg           +  + Iee +
  KHJ31923.1 22 RLQEEGfteaqsvammkVLSDVIEESI 48
                666666444444444442233344444 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00031
       cwf21  24 g...................................lseeeIeervdelRekL 41 
                                                      +e  Ie++v  lRekL
  KHJ31923.1 107 RlrdeisrtqasvrldlnlekgrireeanvqelkikETETKIEQEVAGLREKL 159
                 0444445555666666666667777777788899856***************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1622  (0.090468); expected 358.6 (0.02)
Passed bias filter:                      568  (0.0316805); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.29s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1344.71
//
Query:       KHJ31924.1  [L=505]
Description: putative eukaryotic translation initiation factor 2 subunit gamma [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      9e-34  115.6   1.0    2.2e-33  114.3   1.0    1.7  1  eIF2_C        Initiation factor eIF2 gamma, C terminal
      1e-22   80.6   0.3    7.5e-22   77.8   0.3    2.1  1  GTP_EFTU      Elongation factor Tu GTP binding domain
    9.7e-10   38.7   0.4    2.6e-09   37.3   0.4    1.8  1  GTP_EFTU_D2   Elongation factor Tu domain 2
     0.0048   17.0   0.0       0.01   15.9   0.0    1.5  1  MMR_HSR1      50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.011   15.6   0.0       0.12   12.3   0.0    2.1  2  RsgA_GTPase   RsgA GTPase
       0.03   14.3   0.0      0.067   13.2   0.0    1.5  1  MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain


Domain annotation for each model (and alignments):
>> eIF2_C  Initiation factor eIF2 gamma, C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.3   1.0   7.4e-37   2.2e-33       2      86 .]     406     494 ..     405     494 .. 0.95

  Alignments for each domain:
  == domain 1  score: 114.3 bits;  conditional E-value: 7.4e-37
                 EEEEEEEE-SBESSSSSC..CC..-----TTEEEEEEETTEEEEEEEEEEESSEEEEEEEEEEE-STTEEEEEEEEETTSEEEEEEEEE CS
      eIF2_C   2 eleieyellerlvgvkee..kk..veklkkkEvLmlniGsastggvvtsvkkdeakvkLkkPvcaekgekialsRrvekrWrLiGwGei 86 
                 e+e++y+ll+rl+gvk+   k+  v+kl+k+E+Lm+niGs++tg +v++vk+d ak+ L++P+c+++gek+a+sRr+ek+WrLiGw++i
  KHJ31924.1 406 EIEVNYYLLRRLLGVKTAdgKQakVAKLTKNEILMINIGSTATGIKVAAVKQDAAKLVLTSPACTNIGEKVAISRRIEKHWRLIGWATI 494
                 79**************99762256**************************************************************997 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   0.3   2.5e-25   7.5e-22       3     193 ..      77     280 ..      75     281 .. 0.84

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 2.5e-25
                 EEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEE...................................TT CS
    GTP_EFTU   3 irnigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisle...................................ke 66 
                 ++nig+ighv hGK+T++ ++                     + k+E er iTik   ++ +                                   + 
  KHJ31924.1  77 TINIGTIGHVAHGKSTVVKAISGVQT---------------VRFKNELERNITIKLGYANAKiykcdseecprpgcfksyksdkevdppcerdgctgTY 160
                 68****************99984333...............3456677777777777666666677777777777777777777899****99987557 PP

                 CSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB.STHHHHHHHHHHHHTTTE.EEEEEESCGSTHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
    GTP_EFTU  67 tkkylinliDtPGHvdFskevirglrvlDgavlvvdaveG.vepqteevlrlalkegvp.iivfiNKmDrlkaelkeiveevkqklsrkeeklekygek 163
                    ++++++D+PGH   ++++  g++v+D a+l+++ +e  ++pqt e+l  +  +++  ii++ NK+D +++e  +      +++      ++  ++ 
  KHJ31924.1 161 RLLRHVSFVDCPGHDILMSTMLSGAAVMDAALLLIAGNETcPQPQTSEHLAAIEIMKLDqIIILQNKVDLMREEAAKEHCGSINNF------IRGTVAG 253
                 77899*********************************9879*****************9999********666655555544588......8888888 PP

                 TTTTEEEEEEBTTTTBTHHHHHHHHHHHSH CS
    GTP_EFTU 164 gekevpvvfgSalkgegvktllealvellp 193
                 g    p++++Sa  +++++++ ea+v+ +p
  KHJ31924.1 254 GA---PIIPISAQLKFNIDAVNEAIVNTIP 280
                 85...*********************9987 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.4   8.6e-13   2.6e-09       1      73 [.     312     394 ..     312     395 .. 0.92

  Alignments for each domain:
  == domain 1  score: 37.3 bits;  conditional E-value: 8.6e-13
                  EEEEEEEEEESEEETTEEEEEEC.TCTTSEE........EEEEEEEEEEETEEESEEETTSEEEEEEEESSCCS..GSSTTCEE CS
  GTP_EFTU_D2   1 GtvalgrvysGtlkkGdevrilg.ndtskke........ivtrissletfhededeavaganaGvivaikgled..aiivGdtl 73 
                  G+va+g++  G++k Gde++i++    s++e        i +ri  l  + ++++ av+g+ +Gv+++i+++ +  + +vG +l
   KHJ31924.1 312 GGVAGGSILHGVIKLGDEIEIRPgIV-SRDEkgaikcipIFSRIITLNSESNELKYAVPGGLIGVGTRIDPTLCraDRLVGFVL 394
                  89*********************665.57777***************************************9998877888877 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   3.3e-06      0.01       2      93 ..      80     205 ..      79     229 .. 0.65

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 3.3e-06
                 EEEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEE..ETTEE.......................................EEEEECGGCSS CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvk..lkgke.......................................ielvDtpGlie 58 
                 ++ +G+   GKSt+++a++g  +++ +++    ++i+ g  +  +   +                                       + +vD+pG  +
  KHJ31924.1  80 IGTIGHVAHGKSTVVKAISGVqTVRFKNELERNITIKLGYANakIY--KcdseecprpgcfksyksdkevdppcerdgctgtyrllrhVSFVDCPG-HD 175
                 889*****************65677777775555555554442222..1223567777777788888888888999999999999999********.43 PP

                 HHHHHHHHHHHHHHHHC.TSEEEEEEETTTTCSHHH CS
    MMR_HSR1  59 gaseekglgkaflalee.adlillvvdaseeklkpl 93 
                        l  ++l+    +d++ll++  +e+  +p+
  KHJ31924.1 176 ------ILMSTMLSGAAvMDAALLLIAGNETCPQPQ 205
                 ......577777765554688888886442222222 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.14   4.3e+02     105     126 ..      83     104 ..      65     113 .. 0.78
   2 ?   12.3   0.0     4e-05      0.12      13      99 ..     185     277 ..     162     281 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.14
                  ECSTTSSHHHHHHHHCTT---- CS
  RsgA_GTPase 105 vGqSGvGKStLinallpelelk 126
                  +G+   GKSt+++a+ + ++++
   KHJ31924.1  83 IGHVAHGKSTVVKAISGVQTVR 104
                  567778********99876655 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 4e-05
                  EES--EEEEEEESTTTT--HHHHHHHHHHHHHTT-.EEEEEEE-GGG--HHH......HHHHHHHHHHHTTSEEEE--TTTHTTHHHHHHHCTT CS
  RsgA_GTPase  13 vaNvdqllivvslkepelslnlldrfLvlaeekgi.epvivlnKiDlleeee......eleelkeelealgyevllvsaktkegleelkellkd 99 
                  +a +d +l++++ + +++ + + +  L+++e  ++ +++i+ nK+Dl+ ee       +++++   + a g +++ +sa+ k ++++++e++ +
   KHJ31924.1 185 AAVMDAALLLIAGN-ETCPQPQTSEHLAAIEIMKLdQIIILQNKVDLMREEAakehcgSINNFIRGTVAGGAPIIPISAQLKFNIDAVNEAIVN 277
                  78899999999999.667777778899*******945556669*******99888888888899999999999999999999999999887765 PP

>> MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.3e-05     0.067      58     102 ..     221     277 ..     214     280 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.3e-05
  MMR_HSR1_Xtn  58 clyvlNKiDlisleeldelare............pnsvviSaekelnldeLkekiwe 102
                    +++ NK+Dl+++e  +e +                +++iSa+ ++n+d++ e+i +
    KHJ31924.1 221 IIILQNKVDLMREEAAKEHCGSinnfirgtvaggAPIIPISAQLKFNIDAVNEAIVN 277
                   68899*****9999999988866788999999887899***************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       471  (0.0262703); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3389.00
//
Query:       KHJ31925.1  [L=399]
Description: hypothetical protein EV44_g0438 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2998.66
//
Query:       KHJ31926.1  [L=1509]
Description: putative transmembrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-75  248.9   0.3    2.9e-19   69.3   0.0    5.6  5  C2        C2 domain
     0.0099   15.4   0.0       0.02   14.4   0.0    1.6  1  SMP_LBD   Synaptotagmin-like mitochondrial-lipid-binding doma
  ------ inclusion threshold ------
        4.8    7.5   7.0        1.8    8.9   3.8    2.0  2  DUF3432   Domain of unknown function (DUF3432)


Domain annotation for each model (and alignments):
>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.1   0.0   5.4e-23   3.2e-19       2      94 ..     483     576 ..     482     585 .. 0.92
   2 !   39.8   0.0   7.3e-14   4.4e-10       2     103 .]     626     730 ..     625     730 .. 0.89
   3 !   57.8   0.0   1.9e-19   1.1e-15       3      96 ..     766     858 ..     764     864 .. 0.91
   4 !   69.3   0.0   4.8e-23   2.9e-19       1      96 [.    1109    1204 ..    1109    1211 .. 0.94
   5 !    5.9   0.0    0.0026        15       7      83 ..    1360    1436 ..    1354    1452 .. 0.68

  Alignments for each domain:
  == domain 1  score: 69.1 bits;  conditional E-value: 5.4e-23
                 EEEEEEEEEESSSSSST.TSSCEEEEEEEE.ECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHHTT CS
          C2   2 klevtvieAknLpnkdk.kgssdpyvkvsl.dgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstllsg 94 
                  l +t++ A++L n dk  g++dpyv+vs+  g   ++T+vik + nP+Wne++++ v++  ++ L+++ +d++ ++kd+ iG+++++l+t+++ 
  KHJ31926.1 483 ALAITIHGAQGLRNPDKfAGTIDPYVVVSFnCGLALGQTKVIKENANPKWNETIYLIVTN-FTDNLTFQFYDYNDFRKDKEIGTATLSLDTVEEY 576
                 699*********99999899**********9999***********9**************.*****************************96554 PP

  == domain 2  score: 39.8 bits;  conditional E-value: 7.3e-14
                 EEEEEEEEEESS.SSSSTTSSCEEEEEEEEECEEEEEE-SCSSSSSSEE.EEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHH.HHTTHHH CS
          C2   2 klevtvieAknL.pnkdkkgssdpyvkvsldgkqkakTrviknslnPvW.nekftfevaeleeakLeveVfdndrlskddfiGkveiplst.llsgeea 97 
                 + ++tv +Ak+L   k   g+ +py+++ l++k+++ Tr  k++ nP+W n + ++ +++ ++a++ + ++d++ l  d ++G+ +++l++ l s e++
  KHJ31926.1 626 IARITVEQAKDLdGTKSLIGQLNPYAVLLLNNKEIHITRKLKRTNNPIWdNGSKEVLITDRKSARIGLMIKDDRDLATDPILGTHQLKLDDmLISMEKE 724
                 5689********444455999******************6688889***66899999999************9999***************88899999 PP

                 HEEEEH CS
          C2  98 egwypl 103
                 ++w++l
  KHJ31926.1 725 QEWFNL 730
                 999987 PP

  == domain 3  score: 57.8 bits;  conditional E-value: 1.9e-19
                 EEEEEEEEESSSSSSTTSSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHHTTHH CS
          C2   3 levtvieAknLpnkdkkgssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstllsgee 96 
                 ++++ + A++L n +  g+sdpy+++ ++g +k++T + kn+lnP W+e ++++v+   ++kL++eV+d++++++d  +G+++++ s+ ls+ e
  KHJ31926.1 766 VRFHFKDARKLRNLETLGKSDPYARILVSGIEKGRTVTFKNNLNPDWDEIVYVPVHS-TREKLTLEVMDEETIGHDRSLGTLSVQKSEYLSQGE 858
                 6788999*******99*****************************************.**************99999*******9998554444 PP

  == domain 4  score: 69.3 bits;  conditional E-value: 4.8e-23
                  TEEEEEEEEEESSSSSSTTSSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHHTTHH CS
          C2    1 gklevtvieAknLpnkdkkgssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstllsgee 96  
                  gkl+v v+ A +Lp  d +g sdp+++ +l+gk ++kT+v k++l+P Wne f++++a   +a+ + +Vfd+d  +k++++G + i+l++l+s ++
  KHJ31926.1 1109 GKLRVDVLDASQLPSADRNGYSDPFCRFELNGKDVFKTKVQKKTLHPAWNEFFEIDIASRTTAQFKCTVFDWDFGEKSEILGSTMINLTSLESFKA 1204
                  68************************************************************************9*************99776555 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.0026
                  EEEEESSSSSSTTSSCEEEEEEEE...ECEEEEEE-SC.SSSSSSEEE.EEEEEEESCHTTSEEEEEEEEECSSSTEEEEEE CS
          C2    7 vieAknLpnkdkkgssdpyvkvsl...dgkqkakTrvi.knslnPvWn.ekftfevaeleeakLeveVfdndrlskddfiGk 83  
                  +++A++ p+      ++  v ++    + k+ ++T+ i   + + +++  k +f+++ +++++ +++V+d++ +++dd +G+
  KHJ31926.1 1360 ILSATGYPPS-----TNLMVYLKQlgpKIKTLHRTEHIkTATGDVTFDeRKESFKCTCSADTQFQIQVKDRKIFGSDDDLGE 1436
                  5555555555.....344444444456666777888552445568886334456777788**************99998987 PP

>> SMP_LBD  Synaptotagmin-like mitochondrial-lipid-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   3.3e-06      0.02       1     127 [.     264     394 ..     264     447 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.3e-06
                 --B--HHHHHHHHHHHHHHHH.HHHHHHHHTHHHHH.HTT-GGGTTEEEEEEE--SS--EEEEEEEE-TT--TTSEEEEEEEEEEEEEEEEE...EECC CS
     SMP_LBD   1 dteraewlnktvkhmwpficq.fieklfretiepav.rganthlstfsftkvdvgqqplringvkvytenvdkrqiildlqisfvgnceidl...eikr 94 
                 dte  ew+n  + ++wp+    f e ++ ++++  +   + +++ ++ +    +g +p r++ vk y    d   i++d + sf      d+   +ik 
  KHJ31926.1 264 DTESLEWINSFLIKFWPIFQPvFAETVI-NSVDQVLsTSTPAFMDSLRMKTFTLGSKPPRMEHVKTYPRAED-DIILMDWKFSFNPMDRSDMtsrQIKN 360
                 89***************76551555555.5555555045566889999999****************98776.5799*******876666652224555 PP

                 CTEEEEEEEEEEEEE.EEEEE--B-SSTTSB-EE CS
     SMP_LBD  95 yfcragvksiqihgt.mrvilepligdmplvgal 127
                  +    +  i+i  + +   l+ ++ dm + g l
  KHJ31926.1 361 QVNPKVILEIRIGKAlISKGLDVIVEDMAFSGLL 394
                 5555555555554431334466666666666655 PP

>> DUF3432  Domain of unknown function (DUF3432)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   3.8    0.0003       1.8      15      53 ..      94     132 ..      80     136 .. 0.78
   2 ?   -3.2   0.1       1.7     1e+04      34      51 ..     746     763 ..     745     765 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0003
     DUF3432  15 ysssvatsyPspittsyPsPvstsyssPvsssyssPvht 53 
                  +s++a+   sp+t+   sP+++  ssP ++  ssPv t
  KHJ31926.1  94 LPSTMASGLSSPMTAGPSSPITAGLSSPMTAGLSSPVST 132
                 467777778888877777888888888888888888876 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.7
     DUF3432  34 PvstsyssPvsssyssPv 51 
                 Pvs s   P++  y sP+
  KHJ31926.1 746 PVSMSGIGPGTGGYVSPI 763
                 899999999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1509 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.85u 0.28s 00:00:01.12 Elapsed: 00:00:00.44
# Mc/sec: 10227.58
//
Query:       KHJ31927.1  [L=1066]
Description: hypothetical protein EV44_g0974 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1066 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1151  (0.0641977); expected 358.6 (0.02)
Passed bias filter:                      593  (0.0330749); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.79u 0.28s 00:00:01.07 Elapsed: 00:00:00.43
# Mc/sec: 7523.46
//
Query:       KHJ31928.1  [L=492]
Description: hypothetical protein EV44_g0789 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.12   11.2   0.0       0.21   10.4   0.0    1.4  1  Amnionless  Amnionless


Domain annotation for each model (and alignments):
>> Amnionless  Amnionless
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   1.2e-05      0.21     318     407 ..     258     349 ..     244     378 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 1.2e-05
  Amnionless 318 ealgilsaeletsgasssdssaagapgesaglvlgivfgl.vlllllllillllllrrkgv.....lrlpqllkspsrreeveelkakldkgfdnp 407
                 +al+i+s++   s + s++     +  + +g+++g ++g+ vl+ l++l+l  +  ++ +v     + +p +++s sr +  ++++ +++++f+ p
  KHJ31928.1 258 SALNITSPTKSSSHQYSHHAP---HAPVVVGSIMGSIAGVaVLVFLIMLFLRWHKSNKWMVpldneA-IPGVPHSASRGHLSSNMTLQKPHNFSMP 349
                 566666665444444444333...6778999999999999333344444444444444444755432.5666666655555555555666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (492 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3710.56
//
Query:       KHJ31929.1  [L=653]
Description: putative dna binding protein sart-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.5e-174  581.3  66.7   2.9e-174  581.1  66.7    1.0  1  SART-1    SART-1 family


Domain annotation for each model (and alignments):
>> SART-1  SART-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  581.1  66.7  1.6e-178  2.9e-174       1     631 []       4     617 ..       4     617 .. 0.84

  Alignments for each domain:
  == domain 1  score: 581.1 bits;  conditional E-value: 1.6e-178
      SART-1   1 slSiEEtNklRakLGLkPLeddekkeekskkeddeeedaastledreaeaeenvkkaqeeeakkkkreelkerikkarekrereaklkgktLgeddded 99 
                 s+SiE+tNk+R++LG+kPL+  +k++   kk+++ + d+ stle+r+ae + n++k qeeea+kkkr ++ e+ikkar++++r +kl+gk+L++dd++d
  KHJ31929.1   4 SISIEQTNKIRVSLGMKPLPTPNKSSPIFKKSSSAQPDEGSTLESRQAEGYANFRKLQEEEAAKKKRIAKLEAIKKARDAAQRFSKLEGKGLADDDNDD 102
                 79******************44445555566666678899******************************************************76799 PP

      SART-1 100 ddakaWvkkskkrqkekkeaearakareldeeeeeekaaaaeytskdLaGlkVaHdlddfeegeeviLTLkDkgvlldee.eDeLeNvnlaekeklkkn 197
                 +d+k+W++k+k+rqk    ++++ +++e+   e +e++   eyt++dLaG++V+H+l++f+egee+iLTLkD++++++ee +DeLeN++l+  ekl++ 
  KHJ31929.1 103 MDVKTWLMKQKRRQK----EIEKVRKKEK---ELAEAEVGIEYTANDLAGIQVGHELEAFKEGEEQILTLKDSTIDENEEeGDELENLELRAAEKLNET 194
                 ***************....7877555443...556777889***********************************999967***************** PP

      SART-1 198 lelkkkkkkgYdpyeddedeekeksiLskYDeeidgkkkkksftLgdgsatsaeereekeeikeklkkkklsLdltknaeasDylteeevkfKKpKkkk 296
                 lelkkk k++Y+p+++d  ++k++siL++YDe+   +kk+++ft++ ++++  e  + +++ ++  kk+  sLd+ +++  sDyl ++  k+KKpKkkk
  KHJ31929.1 195 LELKKK-KPVYNPMDMD--DSKNHSILAQYDEDN--EKKNSKFTIN-EHGNVLE--N-SAKDDSTSKKQIFSLDIIQDELESDYLPATIAKVKKPKKKK 284
                 ******.66****7555..56899********66..44477****5.3444444..2.245666778899***************99777********* PP

      SART-1 297 kkktRkkeeelkddddei..kaesd.....edemdvdeeakekekkrkaeeeveedsfvDDdeLqaaLakqRraalkkrkklrpedvakqlkeereeee 388
                 +k++R+k++   d+dd i  +  ++         + d+e+k+      ++++ ++ s+vDDd+Lq++La qR + lkkr+klrpe ++++++ee+ +  
  KHJ31929.1 285 AKSIRQKMV---DEDDIIppP-LKEsisviG--GEGDNEKKP----ILKKRTYNDISLVDDDDLQRSLAAQRANVLKKRQKLRPEALVQKIREEALTPL 373
                 *******99...788877643.333233321..233333223....33566778999*************************************87766 PP

      SART-1 389 .eekeeeeegglvldetseFvrnlgeieekeeekanrekeeesveeeeeeeee.eddeeededveealeeaeeeeeeeekeeeeesekeeskelsetgl 485
                  +++++e+++ lv+detseFv+n+++++  ++     +k+  sv+++ e  ++ +dd ++d+dv++ ++e+ ++e+e+ k e+ ++ek  +++++e+gl
  KHJ31929.1 374 gDNDTSEDKNALVIDETSEFVANIQKPSGPNR-----KKR--SVSRQIETATQaSDDIDRDGDVKM-KQERPDSENEDVKPEHISQEKLLNSQITENGL 464
                 555567899****************9666653.....222..122223333333566777777643.34444444434344677777889999****** PP

      SART-1 486 eeEptvskGlaaaLkllkqkglle.etee..eekqrerqkflaekrrr....eekrreererdrksgkedkqsarerekyarrenrqreqqeareaaef 577
                 + E+t+++Gl+++Lkllk++g+l+ e++e  ++ +r++q flaek+rr    e k+r++rerdr +g++d++sare+e+yar++n+ r+q e+r++ae 
  KHJ31929.1 465 DPEATLDRGLGSTLKLLKERGILKpENSEdlNAIYRQKQLFLAEKQRReaeaELKARAQRERDRSNGRLDRMSAREKEEYARSQNALRDQIESRQLAEH 563
                 ************************6444458*****************9998888999***************************************** PP

      SART-1 578 fekdYkPdvklkYvDefGreLtqKEAFkqLSHkFHGkgsGkkKtEKrlkKieee 631
                 f+k+YkP+v+lkY+DefGr++++KEAFk+LSH+FHGkgsGk+KtEK lkKie+e
  KHJ31929.1 564 FNKEYKPNVELKYIDEFGRSMNKKEAFKHLSHQFHGKGSGKQKTEKVLKKIEDE 617
                 ****************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (653 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2089  (0.116515); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.28s 00:00:01.00 Elapsed: 00:00:00.50
# Mc/sec: 3944.49
//
Query:       KHJ31930.1  [L=447]
Description: putative acyl- dehydrogenase family member 11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-29  102.9   0.3    3.2e-29  102.1   0.3    1.4  1  Acyl-CoA_dh_1  Acyl-CoA dehydrogenase, C-terminal domain
    2.8e-19   69.1   0.0    6.3e-19   68.0   0.0    1.6  1  Acyl-CoA_dh_M  Acyl-CoA dehydrogenase, middle domain
    4.2e-15   56.4   0.0    7.7e-15   55.5   0.0    1.5  1  Acyl-CoA_dh_N  Acyl-CoA dehydrogenase, N-terminal domain
    1.7e-13   51.0   0.3    2.9e-13   50.2   0.3    1.3  1  Acyl-CoA_dh_2  Acyl-CoA dehydrogenase, C-terminal domain


Domain annotation for each model (and alignments):
>> Acyl-CoA_dh_1  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.1   0.3   7.2e-33   3.2e-29       1     148 [.     257     408 ..     257     409 .. 0.97

  Alignments for each domain:
  == domain 1  score: 102.1 bits;  conditional E-value: 7.2e-33
                    TBHHHHHTTTT--S-----..-SHHHHHHHHHHHHHHHTS..B-CC-BGGGSHHHHHHHHHHHHHHHHHHHHHHHHHH--------..HHHHHHHH CS
  Acyl-CoA_dh_1   1 gkGfrvametlnheRlavaaaalglarraleealeyarrr..kafgkplidhqlvreklaemaaeleaarllvyraaealdagkpd..raeasmaK 92 
                    g+Gf+v++ +l  +R+ +a++ +g+a+ral+ +l ++++    +fgk l +h ++ e +a+ ++e++aarl v++aa ++d+++ +   +e++ aK
     KHJ31930.1 257 GRGFEVMQGRLGPGRIHHAMRTIGAAERALDLMLLRINDPrkITFGKQLKEHGVILEWVAKSRVEIDAARLVVLNAAIKIDEHGAKksIKEIAEAK 352
                    79************************************984468**************************************9999999******* PP

                    HHHHHHHHHHHHHHHHHHGGGTTSGGGHHHHHHHHTHHHHHSSS-HHHHHHHHHHH CS
  Acyl-CoA_dh_1  93 lfaselaqevadlamqllGgaGyleeypverlyrdarvlrigeGtseiqrniiarr 148
                    ++++++a +v+d+a+q +G+aG+++++p+++++ ++r+lr+++G++e+++n+++r+
     KHJ31930.1 353 ILVPKIALKVIDRAIQSFGAAGISQDTPLANMWAQIRTLRFADGPDEVHLNQLGRN 408
                    ****************************************************9986 PP

>> Acyl-CoA_dh_M  Acyl-CoA dehydrogenase, middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.0   0.0   1.4e-22   6.3e-19       1      97 []     143     245 ..     143     245 .. 0.89

  Alignments for each domain:
  == domain 1  score: 68.0 bits;  conditional E-value: 1.4e-22
                    EEE---SS-.SS-GGG---EEEEETT.EEEEEEEEEEEETTTT..-SEEEEEEE...TS---.----EEEEEEE..GGGEEE-----BSS-TTS-. CS
  Acyl-CoA_dh_M   1 afalTEpqa.GsdvasvkttaaerdggeyvlnGeKiwitnaai..atlalvlar...tekpd.rarglslflvprdapgvsvrrieeklGlrglp. 88 
                    af +TEp+   sd++++k+  ++++g+ey+lnG K+w+++ ++  +++++v+ar   t+  +  ++++s++lvp+d++g++++r+   +G++++p 
     KHJ31930.1 143 AFLMTEPDIaSSDAKNIKM-NMRKEGDEYILNGDKWWSSGTGDprCKVYIVMARsnpTN--QdPYKRHSIILVPTDSSGIRINRMLSVYGYDDAPh 235
                    799****977********9.66777777***************99*********85444..3569******************************7 PP

                    .EEEEEEE.. CS
  Acyl-CoA_dh_M  89 .tgelvfedv 97 
                     +g+l+f++v
     KHJ31930.1 236 gHGHLTFNNV 245
                    7788999886 PP

>> Acyl-CoA_dh_N  Acyl-CoA dehydrogenase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.0   1.7e-18   7.7e-15       3     112 ..      16     138 ..      14     139 .. 0.84

  Alignments for each domain:
  == domain 1  score: 55.5 bits;  conditional E-value: 1.7e-18
                    HHHHHHHHHHHHHHHHTHH..........HHHHHHHHTSGHHHHHHHHHHTTCTSTTS-GGGTS-..-S-HHHHHHHHHHHHHH-HHHHH.HHHHH CS
  Acyl-CoA_dh_N   3 eqealrdtvrefaeeelap..........haaewdeegefprelwkklaelGllgitvpeeygGa..gldyleaaivaeelaradaglal.llgvh 85 
                    e ++  d ++ f+ee + p          ha++wd+++ + ++l +++ +lGl+++ +p+ +     g+++le+ ++ae l+r  ++ ++   ++ 
     KHJ31930.1  16 EAKKTLDLIKWFVEEVCIPadpvfnaqieHANRWDDHESIIDDLKRQARDLGLWNLFLPKGFYKEspGFTNLEYGLMAEWLGRSRVASEAvNCAAP 111
                    667777778888888887755666666557*****9998899*****************98774313789*************9998888678889 PP

                    HHTTHHHHHHHS-HHHHHHHHHHHHTT CS
  Acyl-CoA_dh_N  86 sslvapailrfGteeqkrryLpklasg 112
                    ++ ++++++ +G+eeqkr++L++l++g
     KHJ31930.1 112 DTGNMEVLAMYGSEEQKRKWLQPLLEG 138
                    99999********************99 PP

>> Acyl-CoA_dh_2  Acyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.3   6.5e-17   2.9e-13       3     125 ..     274     390 ..     272     393 .. 0.88

  Alignments for each domain:
  == domain 1  score: 50.2 bits;  conditional E-value: 6.5e-17
                    HHHHHHHHHHHHHHHHHHHHHHHHCTTT-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHHH CS
  Acyl-CoA_dh_2   3 iaavalGaAraalaefvelarervrassgekladdpatqlalaeaaarldAAralleraaaraealaaagkevtvedraearraaalavelaiaav 98 
                    +a+ ++GaA++al+ ++ ++++  + ++g++l+++ ++   +a+++ ++dAAr+++++aa ++ ++ a+      +  +e++ a++l+ ++a +++
     KHJ31930.1 274 HAMRTIGAAERALDLMLLRINDPRKITFGKQLKEHGVILEWVAKSRVEIDAARLVVLNAAIKIDEHGAK------KSIKEIAEAKILVPKIALKVI 363
                    79999****************544448***********************************6654333......34589999************* PP

                    HHHHHHCGGGGGBTT-HHHHHHHHHHH CS
  Acyl-CoA_dh_2  99 dalfeaaGgsalrkesplqRlwRDaha 125
                    d++++++G+ ++ ++ pl  +w  +++
     KHJ31930.1 364 DRAIQSFGAAGISQDTPLANMWAQIRT 390
                    *****************9888877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (447 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 3180.33
//
Query:       KHJ31931.1  [L=600]
Description: putative d-lactate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.9e-55  187.6   0.0    4.7e-55  186.9   0.0    1.4  1  FAD-oxidase_C  FAD linked oxidases, C-terminal domain
    1.5e-38  131.7   0.0    2.5e-38  131.0   0.0    1.4  1  FAD_binding_4  FAD binding domain
  ------ inclusion threshold ------
       0.12   12.4   0.1       0.21   11.6   0.1    1.4  1  DUF2273        Small integral membrane protein (DUF2273)


Domain annotation for each model (and alignments):
>> FAD-oxidase_C  FAD linked oxidases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.9   0.0   7.9e-59   4.7e-55       1     250 []     344     586 ..     344     586 .. 0.96

  Alignments for each domain:
  == domain 1  score: 186.9 bits;  conditional E-value: 7.9e-59
                    --SEEEEEEEEESSHHHHHHHHHHHHHHT---SEEEEE-HHHHHHHHHTS-SSTTS-TTT-EEEEEEEEE-HHHHHHHHHHHHHHHTTT-EEEEE. CS
  FAD-oxidase_C   1 lpearavalvafpsfeaavkavreiaqagiipaalelmdkkaldlveatkgakkglpdeeealllvefegddeeeaeeelealveaileatgaadv 96 
                    +pea++va+++f+++++a++++ +++ +  ++aa+el+d++++++v+a   +  + ++ e ++l+++f+g+    ++e+++  v  ++++ g +++
     KHJ31931.1 344 KPEATSVAVCTFENIRSAAECAMKVVNSSNPIAAIELLDDVQMQCVNASGMT--KRRWTETPTLFFKFSGTP-TSVNEQIK-IVRGLAKSSGCKNF 435
                    69**********************************************9999..9999**************.9*******.************** PP

                    .........ETGGGGGGGGHHHHHHHHHCTTEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHEEEEEEEEEETTEEEEEEEEEEE..--TT--THHH CS
  FAD-oxidase_C  97 lvaqdeaeaealwkaRkaalpylrdallkagvavlseDtsvPvsrladlvrdikalldkyglevvlfgHagdgnlhlyilfdladeaeeeraeklv 192
                     +a+d++e+  lw aRk al+ +  +  k +  v+++D++vP s l+++++++k+ ++k +l++++ gH gdgn+h  il++++   +++  e++v
     KHJ31931.1 436 EFAKDQEEQSDLWSARKQALWSTMALRDKDEDRVWTTDVAVPFSCLPEIIEKTKEDIKKNCLTASILGHLGDGNFHAIILYNER---KRAITEQVV 528
                    *********************888888899999************************************************886...55555666* PP

                    HHHHHHHHHTT-----------------------THHHHHHHHHHHH-TT--BSTT-- CS
  FAD-oxidase_C 193 devvdlavelgGsisgEHGvGldkkaylerekgeeglalmrriKaalDPkgiLNPgkv 250
                    +++v++a+e+ G+ +gEHGvG+ k++yl++e ge+++++mr++K a+DP  iLN  kv
     KHJ31931.1 529 KRMVKRAIEMEGTSTGEHGVGIGKRDYLNYELGETTVDAMRKLKLAFDPLCILNCDKV 586
                    ******************************************************8886 PP

>> FAD_binding_4  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.0   0.0   4.2e-42   2.5e-38       3     138 ..     173     307 ..     171     308 .. 0.96

  Alignments for each domain:
  == domain 1  score: 131.0 bits;  conditional E-value: 4.2e-42
                    EEEEESSHHHHHHHHHHHHHCTSCEEEESSSTTEESTTC.SCCEEEEEETTS--EEEEETTTTEEEEETTSBHHHHHHHHHHHTTECSSGGGTTCG CS
  FAD_binding_4   3 avvrpeseeevaaalrlaneaglpvlvrGgGssllgqav.atggvvldlsrlnrileideeegtatveaGvtlgdlvealaakglllglepgsgip 97 
                    ++v+p+s+eev+a++++++++ +pv++++gG+sl g+   ++gg+ +d+ r+ +i++++++++ + v++Gv++++l+e la+ +l+++++pg g  
     KHJ31931.1 173 MIVYPASTEEVSAIMKVCHRRLIPVTAYSGGTSLEGHYAaTRGGICIDFGRMGNIIQLNKDDMDVIVQPGVRWQELNETLAKDNLFFPPDPGPG-- 266
                    69*********************************887779***********************************************999988.. PP

                    SBHHHTTTTT-EETTEEGG--HHGTEEEEEEEETTSEEEEE CS
  FAD_binding_4  98 gtvGGaiatnagGygsekyGlirdnvlglevvladGevvrl 138
                    +++GG+++t+ +G+++ +yG++rd+vl++++vladG+v+++
     KHJ31931.1 267 AMIGGMVSTGCSGTNAFRYGTVRDWVLSMTIVLADGTVIKT 307
                    78************************************997 PP

>> DUF2273  Small integral membrane protein (DUF2273)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   3.5e-05      0.21      29      45 ..      84     100 ..      82     102 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.5e-05
     DUF2273  29 ktLliillvliGyyiGk 45 
                 ktL+++ ++liGy++G 
  KHJ31931.1  84 KTLFLLSVALIGYWLGT 100
                 9***************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (600 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       622  (0.0346924); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4394.00
//
Query:       KHJ31932.1  [L=212]
Description: putative histone h1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-26   92.6   0.4    1.4e-26   92.6   0.4    2.1  2  Linker_histone  linker histone H1 and H5 family
  ------ inclusion threshold ------
       0.83    8.4   4.7       0.86    8.4   4.7    1.1  1  DUF4551         Protein of unknown function (DUF4551)
        1.3    8.9  13.1        1.5    8.7  13.1    1.1  1  SRP-alpha_N     Signal recognition particle, alpha subunit, N


Domain annotation for each model (and alignments):
>> Linker_histone  linker histone H1 and H5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.6   0.4   2.4e-30   1.4e-26       1      74 []      18      90 ..      18      90 .. 0.97
   2 ?   -2.1   0.4      0.88   5.3e+03      21      37 ..      98     114 ..      91     133 .. 0.54

  Alignments for each domain:
  == domain 1  score: 92.6 bits;  conditional E-value: 2.4e-30
  Linker_histone  1 hpsykdMikeAIkalkerkGsSrqaIkkyikakykvv.dvskfksllkkalkkgvekgelvqpkgkGasGsfKLa 74
                    h sy+dMi++ I +lker+GsSr a+kkyika++k   d + f+sl+++alk+gvekg++ qpk  GasG  KLa
      KHJ31932.1 18 HVSYQDMIIDGIVTLKERNGSSRVALKKYIKANHKNIvDGKMFDSLFNRALKSGVEKGIFAQPK--GASGGTKLA 90
                    889********************************889**************************..*******96 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.88
  Linker_histone  21 sSrqaIkkyikakykvv 37 
                     +S ++ k  ik++ k  
      KHJ31932.1  98 VSKPTTKVDIKTTEKKA 114
                     55555555555555443 PP

>> DUF4551  Protein of unknown function (DUF4551)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   4.7   0.00014      0.86     152     228 ..      89     162 ..      24     201 .. 0.57

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00014
     DUF4551 152 akekeektvskksqlslsl.selrklseeekeelesekalkslrsasrplPesllsrapkppsspkeppssslskder 228
                   +ke+kt+++k ++++   ++ +k     ++++   k++  +++a+ ++P s++ ++p+p++++++  s++++++++
  KHJ31932.1  89 LAKKESKTPVSKPTTKVDIkTTEKKAG---EKKSTASKKVVPAKKAGTCKPDSPK-SKPSPATTKSKALSKTKKTKSK 162
                 344555555555555544322222222...2233333456667899999998883.2333333333333333222222 PP

>> SRP-alpha_N  Signal recognition particle, alpha subunit, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7  13.1   0.00025       1.5      78     229 ..      50     204 ..      20     212 .] 0.42

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00025
                  SS-S----TT..HHHHHHHHHHH.HXXXXXXXXX........XXX..XXXXXXXXXX.....XX.XX.............XX.........XXXXX.. CS
  SRP-alpha_N  78 pkttlvecaksyFdeyFdqllre.lEasaeaakkskaakepkamksfeeskkskktvksskedkkpe..gkkkkgakkekda.........sddstps 163
                  ++  +v+ +   Fd  F++ l++ +E+   a+ k  a+  +k +k+  ++  sk t+k  +++ +++  +kk+ ++kk  +a         s +s+ps
   KHJ31932.1  50 NHKNIVDGKM--FDSLFNRALKSgVEKGIFAQPK-GASGGTKLAKKESKTPVSKPTTKVDIKTTEKKagEKKSTASKKVVPAkkagtckpdSPKSKPS 144
                  3444444443..9999999997625555444433.333333333444444444444444444443333222222222222224334433332222222 PP

                  .XXXXXXXXXX.XXXXXXX.XXX.XXXXXXXXXXXXXX..XXXXXXXXXXX....XXXXXXX..XXX CS
  SRP-alpha_N 164 atpetsrpstp.sglltakeagptaedvsrrarkkankkrssagassgdeakasksskkkkkkpkkk 229
                   + ++s++ ++ ++++++++  p++ ++  r +    +k+ sa+     ++  ++++k+++  p kk
   KHJ31932.1 145 PATTKSKALSKtKKTKSKEAVPPEVPAILSRTKSGRITKSISAP-----RKVIAPKKKTTT--PMKK 204
                  22112211111222333333344444444444433222222222.....112222222222..2222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1246  (0.0694963); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.44
# Mc/sec: 1438.52
//
Query:       KHJ31933.1  [L=1013]
Description: putative gastric mucin-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1013 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       748  (0.0417201); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.73u 0.29s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 6481.90
//
Query:       KHJ31934.1  [L=766]
Description: putative vtc domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-89  299.6   3.8    4.1e-89  298.6   3.8    1.5  1  VTC       VTC domain
    1.6e-12   47.7   0.6    2.7e-12   46.9   0.6    1.4  1  DUF202    Domain of unknown function (DUF202)
    9.4e-10   38.9  17.5    4.7e-05   23.5   0.9    3.7  3  SPX       SPX domain


Domain annotation for each model (and alignments):
>> VTC  VTC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  298.6   3.8   6.9e-93   4.1e-89       3     275 .]     207     483 ..     205     483 .. 0.98

  Alignments for each domain:
  == domain 1  score: 298.6 bits;  conditional E-value: 6.9e-93
                 EEEEEEE-HHHHHHHHHHHHTTS-B----------------------EEEEEEE-TT-HHHHHHHHT-TT--EEEEEEES-GGG-.-EEEEEEEE---- CS
         VTC   3 netKywvhsdnvvevktlilkhlpvlvygaseeeiaaallrksadqtitsvYfDnndfelyenrilkmegaekiRlRwygkldne.dvflErktkhesw 100
                 + +K+wvh+dn+ evkt+il++lpvl+y++ +++++++      d++ +s+YfD+++f ly+++++++  ++++RlRwyg+l+ e ++f+E+k+    +
  KHJ31934.1 207 TAYKFWVHPDNLLEVKTYILRRLPVLIYSQVSSQDSKV---APGDPALNSLYFDSPEFILYKKKVDRQATSKSLRLRWYGQLNAEtEIFIEIKSV---N 299
                 689**************************999888777...99***************************************9999*********...9 PP

                 ----EEEEEEEE-GGGHHHHH---HHHHHHHHHHHHHT-.HHHHHHHHHHHHHHHHHHHHTT-EEEEEEEEEEEEE--TT--SEEEEEEEEEEEEE--- CS
         VTC 101 tgesstkerftlkqkfvksyllgrlpaeerleklkkkee.ekevekleqlaeeiqntilrnslqPvvrtsYlRaaFqlstdnavRitiDtnlcmvreds 198
                 ++++s+++rf++k+k+++s+++g+ ++e+++ek++++e  ++++ ++++ +++iq++i +n+lqPv+r++Y+R+aFq + d++vRi+iDtnl ++reds
  KHJ31934.1 300 ENGTSDERRFPIKEKYIQSFIRGEQKMEKIIEKMERQERpKSKIIEFKKTVSDIQKLIIENDLQPVLRANYTRTAFQKPIDDKVRISIDTNLAFIREDS 398
                 9************************************998999******************************************************** PP

                 -SSSS-SS-T..SS-SSTT...SS-TTTT--GGGEEE--SEEEEEEE--...----HHHHHHHTSTT-EE-TT--HHHHHHHHHH CS
         VTC 199 feerrkledt..werlded...vqqpvkllrkgevvrfpyavlEvKlqt...skspewiqeLlashlvievpkfSKYqhgvaslh 275
                 ++ +r++++   w+rld d   +++p++ l++ge+ rfpya+lE+K++    +++p+w+++L+ashlv+++++fSK++hgva+l+
  KHJ31934.1 399 IDLERPCRNFkdWHRLDVDnlhMTYPFHNLNQGEINRFPYALLEIKVKDevgKNHPKWVEDLMASHLVHKTHRFSKFVHGVAVLF 483
                 *********99**************************************9********************************996 PP

>> DUF202  Domain of unknown function (DUF202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.9   0.6   4.6e-16   2.7e-12       1      66 [.     638     705 ..     638     707 .. 0.88

  Alignments for each domain:
  == domain 1  score: 46.9 bits;  conditional E-value: 4.6e-16
      DUF202   1 rdglAnERTfLaWlRtslalialglallrffl..tgepsalgkilglilivlgiltllvglvrylrrq 66 
                 +++lAnERTf+ W+ +s+ l++lg++l    +  +++ ++l+ ++g+i++v+++lt ++g++  + r+
  KHJ31934.1 638 KVWLANERTFIKWMQISIQLAVLGVGLNSAGKgtKSDDKQLTTWFGFIYVVIAALTGWWGIYIQRIRR 705
                 68**************************87666666777789******************99877666 PP

>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.9   7.9e-09   4.7e-05       1      37 [.       1      37 [.       1      95 [. 0.80
   2 !   21.0   2.0   4.4e-08   0.00026     349     369 ..     116     136 ..     112     141 .. 0.94
   3 ?    3.0   0.7     0.013        78      80     133 ..     518     570 ..     485     655 .. 0.44

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 7.9e-09
         SPX  1 MKFakeLeenlvpEWrdaYldYkqLKKlIkkvqrele 37
                MKF++ L ++ +p W  +Y++Y +LK l+k+ + e+ 
  KHJ31934.1  1 MKFGRILRDSVIPKWEGQYVNYAKLKSLLKEDVDERT 37
                ******************************8777555 PP

  == domain 2  score: 21.0 bits;  conditional E-value: 4.4e-08
         SPX 349 lLKsYqeLNrtAFrKIlKKfD 369
                 +LK+Y+e+N tAF KI KK+D
  KHJ31934.1 116 ELKKYSEINYTAFLKIVKKHD 136
                 7******************** PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.013
         SPX  80 adasssepkdeae.........slprrsplsrssrssssygglvssppsansssssddssesn 133
                 ++a         e          ++++  + ++  s+ s ++ + +p+++ns++   ++ ++n
  KHJ31934.1 518 KEA---------EndqvvgsllGTSKKGAS-NNRASNDSSSNHSYPPENSNSGELARHQLDQN 570
                 111.........122222222122222111.11111112222222222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (766 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1068  (0.0595683); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 5132.11
//
Query:       KHJ31935.1  [L=679]
Description: putative serine palmitoyltransferase 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.2e-62  210.1   0.0    6.8e-62  209.7   0.0    1.1  1  Aminotran_1_2    Aminotransferase class I and II
     0.0082   14.7   0.0      0.015   13.8   0.0    1.3  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
     0.0088   15.0   0.0      0.013   14.5   0.0    1.2  1  Aminotran_5      Aminotransferase class-V
     0.0093   15.3   0.0      0.014   14.7   0.0    1.2  1  Beta_elim_lyase  Beta-eliminating lyase
  ------ inclusion threshold ------
       0.03   13.6   0.0      0.066   12.5   0.0    1.5  1  DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.7   0.0   1.9e-65   6.8e-62       2     361 ..     253     610 ..     252     612 .. 0.94

  Alignments for each domain:
  == domain 1  score: 209.7 bits;  conditional E-value: 1.9e-65
                    EEEESSSSSTTSTTSS.HHHHHHHHHHHH..HHHHHTSTTST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT- CS
  Aminotran_1_2   2 dvinLgsneylgdsgk.ptlpevakaeke..galaggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgd 94 
                    + +n++s +ylg +++  ++ +++++ ++  g +  ++++  g+++++ e+ee++akf+g       k+  a v+++G++ ++  +++l    +g+
     KHJ31935.1 253 ETLNMSSYNYLGFAQSeGPCADAVEESIRkyGTSVASPRADAGTSELALEVEERIAKFVG-------KPA-AMVFSMGFSTNATSFPALVG--KGS 338
                    578*********************************************************.......555.*******************9..*** PP

                    EEEEEESS-THHHHHHHHTTSEEEEEEBEETTTTEE-HHHHHHHHTTHHCTTE.......TEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEE CS
  Aminotran_1_2  95 eilvpdptyasyknilrlsggevvryplyseedfhldlealeealkeapegnk.......ktkvilvesphNPtGtvatleeleklldlakkynll 183
                     i++++++++s+  ++rlsg+ + +++       h+d  +le++l+ea ++ +       k+ ++++e+ +++ Gt+++l+ + kl   +++y+++
     KHJ31935.1 339 LIISDELNHTSIRIGARLSGAMIASFK-------HNDTSDLEKKLREAISQGQprthrpwKKILVIIEGLYSMEGTMCDLPGILKL---KDRYKFY 424
                    ***************************.......****************************************************...******* PP

                    EEEEETTTTCBSSSS.HTHHH..HGGSTTSTTEEEEEESSSTTSSGGG-EEEEEEEHHHHHHHHHHHHHHTS.SHHHHHHHHHHHHHHHHHHH... CS
  Aminotran_1_2 184 lfvDeaYagfvfgsl.davat..ranveeepnllivgslsKafGlaGeRvGyilgnaavvsqlrklsrpfls.ssllqaavaaalsdallkqs... 272
                    lfvDea++++++g++ +   +  +++v+++  ++++g+l K+fG+ G   Gy+++ +++++ lr   ++ l+  s+++++++++ls+ + +     
     KHJ31935.1 425 LFVDEAHSIGALGPKgR-G-VcdYFGVDPARVDILMGTLTKSFGANG---GYVAAEKHIIDKLRATNAATLYgESPTPPVLMQILSALKIISGeiv 515
                    *************8742.2.246************************...******************99999**************7765559** PP

                    ..HHHHHHHHHHHHHHHHHHHHHHSTEEEECCS.CSSEEEEEETHHCHHHHHHHHHHTCTEEEEEGGGGTS...TTEEEEEC.TTS-HHHHHHHHH CS
  Aminotran_1_2 273 ..eleemrqrlqkrrkelrdeLaelglkvlasq.sgmflltdlsaetakelskkLleevgvyvtpgtsftv...pgrlRitv.Aglteeeleelve 361
                      + ee+ qr++ ++++lr +L++lg +v++ + s ++++++++++++ ++s ++l + ++ v+ + ++ +   ++r R++v A++++++l++l++
     KHJ31935.1 516 pgQGEERLQRIAFNSRYLRLGLKRLGYIVYGHDdSPIIPIMLYNPAKMPAFSHEMLRR-KISVVIVGYPATpliSSRARFCVsAAHNKDDLDRLLT 610
                    *************************888888888********************8888.666666667777788*******************987 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   4.3e-06     0.015      57     177 ..     303     432 ..     293     437 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 4.3e-06
                      HHHHHHHHHT-SEEEEESSHHHHHHHHHHTTS-TTEEEEEESTSSHHHHHHHHHTHHHTTCEEEEESTTSHH.HHHHHCCT...TEE......E CS
  Cys_Met_Meta_PP  57 leeriaaLeggeaalavssGmaAiaaailallkaGdeivvsddlYggtqrllkkvlkklgievkfvdtsdle.elekaike...ntk......l 140
                      +eeria+  g  aa+++s G ++ a+++ al+ +G+ i +sd+l   + r+  ++   +  ++k+ dtsdle +l++ai++   +t+      l
       KHJ31935.1 303 VEERIAKFVGKPAAMVFSMGFSTNATSFPALVGKGSLI-ISDELNHTSIRIGARLSGAMIASFKHNDTSDLEkKLREAISQgqpRTHrpwkkiL 395
                      79*********************************865.5678999999999999999**********99762688888655445533333337 PP

                      EEEESS-TTTT----HHHHHHHHHHTT-EEEEEGTTT CS
  Cys_Met_Meta_PP 141 vylEtptnpllkvvDiekiaklakkagvlvvvDntfa 177
                      v +E + +    ++D++ i+kl    +  ++vD + +
       KHJ31935.1 396 VIIEGLYSMEGTMCDLPGILKLKDRYKFYLFVDEAHS 432
                      8899999999999999999999999999999998765 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   3.5e-06     0.013      19     182 ..     276     435 ..     266     469 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.5e-06
                  HHHHHHCTCCSSSSSSSHHHHHHHHHHHHHHHHHHHHHT-STGGGEEEESSHHHHHHHHHHHCCCC-TTTSEEEEETTSHGGGTHHHHHHHHHHTEEE CS
  Aminotran_5  19 lqeyytdynanvhrsvhhlgkeatkaveearekvaelinaeseeeiiftsGtteainlvalslarslkpgdeivvteaehhanlvpwqelakrtgakv 116
                  ++e  ++y ++v +   ++ + +++   e++e++a++++ +    ++f  G +    + a s+ + + +g  i+  e++h + +   ++l    ga +
   KHJ31935.1 276 VEESIRKYGTSVAS--PRADAGTSELALEVEERIAKFVGKPA--AMVFSMGFS----TNATSFPALVGKGSLIISDELNHTSIR-IGARL---SGAMI 361
                  55555555666633..3444556899999***********96..99**88755....45555544489***************9.44444...59999 PP

                  EEEEBETTSCBEGGGHHHH-.........-TTEEEEEEESBETTTTEB--HHHHHHHHHHTT-EEEEE-TTTTTT CS
  Aminotran_5 117 kvipldeegeldldelekll.........nektklvaithvsnvtGtiqpveeigklakkkgalvlvDaaqavgh 182
                    ++ +++  l+ ++l++++           k  lv+i    ++ Gt+ +++ i kl  +++ +++vD a ++g 
   KHJ31935.1 362 ASFKHNDTSDLE-KKLREAIsqgqprthrPWKKILVIIEGLYSMEGTMCDLPGILKLKDRYKFYLFVDEAHSIGA 435
                  999999999888.777777766655433123445999******************99999***********9986 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   3.9e-06     0.014      29     213 ..     295     477 ..     278     538 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 3.9e-06
                      T--HHHHHHHHHHHHHTT-SEEEEES-HHHHHHHHHHHH--TTEEEEEETT-HHHHSSTTHHHHCC--EEEEE-EBTTTBE-HHHHHHHS--S- CS
  Beta_elim_lyase  29 gedktvnrLedavaelfgkeaalfvpqGtaAnsillkillqrgeevivtepahihfdetgaiaelagvklrdlknkeaGkmdlekleaaikevg 122
                      g+++   ++e+++a+ +gk aa+ +  G   n+ ++ +l+ +g+ +i +e +h+  +     a l+g++   +k++++ +++ +kl++ai + g
       KHJ31935.1 295 GTSELALEVEERIAKFVGKPAAMVFSMGFSTNATSFPALVGKGSLIISDELNHTSIR---IGARLSGAMIASFKHNDTSDLE-KKLREAISQ-G 383
                      67778899********************************99999999999998764...4456899999999999955554.68******9.5 PP

                      T...TS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEEETTHHHHHHHHTS-CHHHH....TTSSEEEEESSSTT--SS-EEEE CS
  Beta_elim_lyase 123 a...heekiklisltvTnntagGqvvsleelrevaaiakkygiplhlDgARfanaakslgeivkemf....syvDsvtmslkKdllanvGgvla 209
                      +   h++  k++++     ++ G++  l     + ++ ++y+  l++D A  + a    g  v ++f    + vD+++  l+K  +an Gg +a
       KHJ31935.1 384 QprtHRPWKKILVIIEGLYSMEGTMCDL---PGILKLKDRYKFYLFVDEAHSIGALGPKGRGVCDYFgvdpARVDILMGTLTKSFGAN-GGYVA 473
                      5599***999999999999988987665...556677789999999999999999999999999999888888999999999999997.77777 PP

                      E-HH CS
  Beta_elim_lyase 210 frdd 213
                       ++ 
       KHJ31935.1 474 AEKH 477
                      6665 PP

>> DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.8e-05     0.066      28     152 ..     303     436 ..     291     448 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.8e-05
                      HHHHHHHHHT-SEEEEESSHHHHHHHHHHHTTTTTT-EEEEESSS-THHHHHHHHTT-EEEEE-B-TTTSSB-GGGCGGG-...-TTE....EE CS
  DegT_DnrJ_EryC1  28 FEkafaaylgvkhaiavssGtaAlhlaLralgvgpgdeVIvpsltFvatanavlelgakpvfvDvdpdtynidpaaieaai...tert....ka 114
                       E+++a+++g+  a  +s G ++++ +  al vg+g  +I   l+ ++    ++ +ga    +  + ++     +++++ai   ++rt    k 
       KHJ31935.1 303 VEERIAKFVGKPAAMVFSMGFSTNATSFPAL-VGKGSLIISDELNHTSIRIGARLSGAMI--ASFKHNDTSDLEKKLREAIsqgQPRThrpwKK 393
                      5777777777777777777777777777776.6667777777777776666666666643..33333333333445555552223555777755 PP

                      EEEB.....-GGGB---HHHHHHHHHHCT-EEEEE-TT-TT-E CS
  DegT_DnrJ_EryC1 115 IlpV.....hlyGqvadmdalkaiaakhglkvieDaAhAlGat 152
                      Il++      + G ++d++ + ++ ++++ +++ D Ah++Ga 
       KHJ31935.1 394 ILVIieglySMEGTMCDLPGILKLKDRYKFYLFVDEAHSIGAL 436
                      554433333688*****************************84 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (679 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 4492.89
//
Query:       KHJ31936.1  [L=166]
Description: putative drap deaminase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-56  189.1   1.4    2.9e-56  188.8   1.4    1.1  1  Inv-AAD          Invertebrate-AID/APOBEC-deaminase
      4e-15   55.5   0.0    5.2e-15   55.2   0.0    1.2  1  dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-
      0.007   16.3   0.1     0.0081   16.1   0.1    1.1  1  APOBEC_N         APOBEC-like N-terminal domain
     0.0083   15.9   0.0      0.011   15.5   0.0    1.3  1  MafB19-deam      MafB19-like deaminase
  ------ inclusion threshold ------
       0.05   13.7   0.0      0.057   13.5   0.0    1.2  1  NAD1             Novel AID APOBEC clade 1


Domain annotation for each model (and alignments):
>> Inv-AAD  Invertebrate-AID/APOBEC-deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.8   1.4   8.1e-60   2.9e-56       1     129 []      35     163 ..      35     163 .. 0.99

  Alignments for each domain:
  == domain 1  score: 188.8 bits;  conditional E-value: 8.1e-60
     Inv-AAD   1 gavlvdadkneilatGytleleGnthaeqccliklaekhevaeeklaevlpkntvlYttmepCskRlsGnlpCveRilklkeaiktvyvGvkePekfva 99 
                 ga+lvd d+n+i++tGytle+eGnthaeqcc+ikla k++v+e+ l++++p+n++lYtt+epC  RlsG  +CveRilkl+++ik +yvG  eP++fv+
  KHJ31936.1  35 GALLVDGDTNTIISTGYTLECEGNTHAEQCCIIKLAVKYGVSEQVLGNFIPQNIILYTTLEPCILRLSGAESCVERILKLRNNIKVIYVGSLEPDTFVT 133
                 89************************************************************************************************* PP

     Inv-AAD 100 enkgrkkleeagievvhvegledeilevat 129
                 +n+g++kle+agi+v++v++l++eile+at
  KHJ31936.1 134 KNEGKAKLEAAGIKVCEVSCLRKEILEIAT 163
                 ****************************97 PP

>> dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2   0.0   1.5e-18   5.2e-15       3      96 ..      10     120 ..       8     125 .. 0.88

  Alignments for each domain:
  == domain 1  score: 55.2 bits;  conditional E-value: 1.5e-18
                      HHHHHHHHHHHHHHHHH.TTTSCSEEEEEEE..TTEEEEEEESBHHCCTGTTB-HHHHHHHHHHHH.T.SSCE......TTEEEEEEE--BHH. CS
  dCMP_cyt_deam_1   3 kdekllelalkaakeaq.kcsnfkVGavivk..ngeiistgyngepaggsktiHAEvnAilkaakn.g.gskl......egatlyvtlePCsm. 84 
                      ++  +++lal++a+++  k +n +VGa +v+  ++ iistgy  e +g++   HAE+++i+k a + g ++++      ++ +ly+tlePC   
       KHJ31936.1  10 SHTAYMRLALQLARKSPlKSTNYRVGALLVDgdTNTIISTGYTLECEGNT---HAEQCCIIKLAVKyGvSEQVlgnfipQNIILYTTLEPCILr 100
                      5789***************************98889*********99999...*********9988786666699999999**********988 PP

                      ......HHHHHHHHT..-SE CS
  dCMP_cyt_deam_1  85 ......Cakaiiqsg..ikk 96 
                            C + i +++  ik 
       KHJ31936.1 101 lsgaesCVERILKLRnnIKV 120
                      999999****9999743333 PP

>> APOBEC_N  APOBEC-like N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   2.3e-06    0.0081      34     137 ..      48     147 ..       5     161 .. 0.66

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2.3e-06
                 EEEEEEEE-..SS.....TBCHHHHHHHHHHHH.T--.T....TEEEEEEEEESS-S-HH....HHHHHHHHHHH-TTEEEEEEESE-ST...STSHHH CS
    APOBEC_N  34 kkGvLrnqsgaaa.....skHaEelflediedq.elrep....kkkyeitlYvswsPChessdeCaeklaaflkkeknvelkifvsrlykakwwekpke 122
                 ++G+        +     ++HaE++ + ++  +  ++e+        +i+lY+++ PC       ++ ++ +lk  +n+++ i+v  l     ++k+  
  KHJ31936.1  48 STGY--------TlecegNTHAEQCCIIKLAVKyGVSEQvlgnFIPQNIILYTTLEPCILRLSGAESCVERILKLRNNIKV-IYVGSLEPDTFVTKN-- 135
                 3444........03333379*****99999988777763554455679************888877777777888888885.788888443332222.. PP

                 HHH..HHHHHHTTEE CS
    APOBEC_N 123 aekeglrllkqagve 137
                    eg   l++ag++
  KHJ31936.1 136 ---EGKAKLEAAGIK 147
                 ...233334444333 PP

>> MafB19-deam  MafB19-like deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   3.1e-06     0.011       2      83 ..      10      98 ..       9     150 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 3.1e-06
  MafB19-deam  2 dkekafrkalaevek.atkikedkiga..vivkdkkviargsnekelnakataHaEiaalqq.Aakklkskr......lddatlyvtlepCd 83
                 ++ +++r al++++k ++k ++  +ga  v+   + +i +g++   l+ +   HaE   + + A+k + s +      +++ +ly+tlepC 
   KHJ31936.1 10 SHTAYMRLALQLARKsPLKSTNYRVGAllVDGDTNTIISTGYT---LECEGNTHAEQCCIIKlAVKYGVSEQvlgnfiPQNIILYTTLEPCI 98
                 68999*****99987368889999***555557789*******...888999****955444255544333222222289***********5 PP

>> NAD1  Novel AID APOBEC clade 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.6e-05     0.057      35      94 ..      44     116 ..      22     149 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.6e-05
        NAD1  35 sssllkGvlen.eskcHaEllflnki.....kslklldpsqkykvtwylswSPC.......seCasklaeflk 94 
                 ++ ++ G++ + e ++HaE++ + k+      s ++l +    ++++y++  PC       ++C++++ ++ +
  KHJ31936.1  44 NTIISTGYTLEcEGNTHAEQCCIIKLavkygVSEQVLGNFIPQNIILYTTLEPCilrlsgaESCVERILKLRN 116
                 4445558886656667****99666633333334444445599***********9999988889999887644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1253.92
//
Query:       KHJ31937.1  [L=168]
Description: hypothetical protein EV44_g2616 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      203  (0.0113224); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1370.38
//
Query:       KHJ31938.1  [L=465]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.9e-120  401.4   0.1   1.9e-120  401.4   0.1    1.9  3  Septin        Septin
    2.4e-08   34.0   0.5    5.1e-08   33.0   0.0    1.8  2  MMR_HSR1      50S ribosome-binding GTPase
      7e-06   25.7   1.1     0.0011   18.5   0.0    2.9  2  GTP_EFTU      Elongation factor Tu GTP binding domain
    6.2e-05   23.0   2.8     0.0026   17.7   0.8    3.3  2  RsgA_GTPase   RsgA GTPase
    0.00093   19.7   2.8      0.033   14.7   0.0    2.7  2  ABC_tran      ABC transporter
     0.0015   18.9   0.1     0.0055   17.1   0.0    1.9  2  AAA_16        AAA ATPase domain
     0.0018   18.5   0.8      0.025   14.9   0.0    3.1  3  AAA_22        AAA domain
     0.0024   18.1   0.0     0.0055   16.9   0.0    1.6  1  Roc           Ras of Complex, Roc, domain of DAPkinase
     0.0043   16.4   1.3     0.0071   15.7   0.0    2.0  2  AIG1          AIG1 family
     0.0078   15.8   0.4      0.056   13.0   0.0    2.6  3  Ras           Ras family
  ------ inclusion threshold ------
      0.014   15.5   4.8       0.45   10.5   0.0    3.8  4  Dynamin_N     Dynamin family
      0.014   14.8   0.0      0.032   13.6   0.0    1.6  1  FtsK_SpoIIIE  FtsK/SpoIIIE family
      0.032   14.0   0.0      0.057   13.2   0.0    1.4  1  AAA_29        P-loop containing region of AAA domain
      0.033   13.9   0.0       0.07   12.8   0.0    1.6  1  AAA_24        AAA domain
       0.09   13.2   0.7       0.67   10.4   0.0    2.7  3  RNA_helicase  RNA helicase
       0.22   11.6   1.2       0.51   10.4   1.2    1.6  1  Strep_SA_rep  Streptococcal surface antigen repeat
       0.23   11.5   1.8        2.7    8.1   0.0    2.5  2  DUF87         Helicase HerA, central domain
        0.5   10.1   2.5         24    4.6   0.0    3.2  3  ATP_bind_1    Conserved hypothetical ATP binding protein
       0.93    9.1  10.4       0.79    9.3   8.8    1.8  2  AP1AR         AP-1 complex-associated regulatory protein
        2.3    7.7   7.5        3.7    7.0   7.5    1.2  1  Exonuc_VII_L  Exonuclease VII, large subunit


Domain annotation for each model (and alignments):
>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       4.8   4.3e+03     194     215 ..      34      55 ..      29      63 .. 0.80
   2 !  401.4   0.1  2.1e-123  1.9e-120       1     278 [.      89     367 ..      89     370 .. 0.97
   3 ?   -2.8   1.1       3.4   3.1e+03     156     156 ..     419     419 ..     382     449 .. 0.47

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4.8
                 HHHHHHHC-SEEB-SSSSEEEE CS
      Septin 194 lseklkeslPfaivgsneliek 215
                  ++++++ +P ++ +s+ +i +
  KHJ31938.1  34 GTKNIFQDIPQSVSSSDPKIAA 55 
                 5789999******999988876 PP

  == domain 2  score: 401.4 bits;  conditional E-value: 2.1e-123
                 XEEEEEEEEEEBTTSSCCCCCCTTSSSS------------.------S-EEEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHHHHHHHHHH CS
      Septin   1 kgieftlmvvGesglGkttlintlfetdlieeekleease.kkkktveikkkkvvieedgvklnltviDtpgfGdavdnskswepiveyideqfeeylr 98 
                 kg++f++mvvGesglGk+tl+ntlf+++l++ ++ + +s   + ktv+i++ ++ iee+gv+l+ltv+DtpgfGd+v+n+ sw+piv++i+++f++yl+
  KHJ31938.1  89 KGFNFNIMVVGESGLGKSTLVNTLFNSSLYPPRERKGPSLdIIPKTVSIQSISADIEENGVRLRLTVVDTPGFGDFVNNDGSWRPIVDNIEQRFDAYLD 187
                 79*******************************9**99985889******************************************************* PP

                 HCTSS--SS-----EEEEEEEE-TTSSSS-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT--------SSSS-SCCHHHHHHH CS
      Septin  99 eesklkRkkivDkRvHaclyfisPtghglkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeikiyklpdeeededeeakelsek 197
                 +e+k++Rk+ivD+RvHac+yfi+Ptgh lkpld+e+m++l++kvnliPviaKaDt+t+eE+++fK++i +++++++i+i++  + +e +dee+  ++++
  KHJ31938.1 188 AENKVNRKNIVDNRVHACVYFIQPTGHALKPLDIEVMRRLHTKVNLIPVIAKADTMTDEEISAFKSRILADVKHHDIQIFE-GPRYELDDEETIAENNE 285
                 *********************************************************************************.66666777999999*** PP

                 HHHC-SEEB-SSSSEEEE.SSSEEEEEEETTEEEETT-TTT-SCCHHHHHHHHHCHHHHHHHHHHTHHHHHHHHHH-XXXXX CS
      Septin 198 lkeslPfaivgsneliek.kgkkvrgRkypWGvvevenekhsdFlkLrklllkthledLkevteellYetyRseklsklkek 278
                 + +++Pfa+vg+n++i++ +g kvrgR+ypWGv+ev+ne+h+dF+kLr++l++th+e+Lke t++ lYe+yRsekl+++  +
  KHJ31938.1 286 IMSKVPFAVVGANSEITNaDGLKVRGRRYPWGVIEVDNEEHCDFVKLRQMLIRTHMEELKEHTSNALYENYRSEKLTAMGVA 367
                 ******************9*********************************************************998766 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 3.4
                 H CS
      Septin 156 k 156
                 +
  KHJ31938.1 419 E 419
                 1 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   5.7e-11   5.1e-08       1     102 [.      94     228 ..      94     240 .. 0.63
   2 ?   -3.0   0.2       8.7   7.8e+03      68      81 ..     390     403 ..     372     443 .. 0.50

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 5.7e-11
                 EEEEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEE...........EEEEECGGC........................SSHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgke...........ielvDtpGl........................iegasee 63 
                 ++++vG +  GKStL+n+l+++      +++g  +di+ ++v+++  +           +++vDtpG+                        +   + e
  KHJ31938.1  94 NIMVVGESGLGKSTLVNTLFNSsLYPPRERKGPSLDIIPKTVSIQSISadieengvrlrLTVVDTPGFgdfvnndgswrpivdnieqrfdayL---DAE 189
                 589******************855677888888888888888854222333344444559*******77777777776665555332222211...122 PP

                 HHHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHHHHHHH CS
    MMR_HSR1  64 kglgkaflaleeadlillvvdaseeklkpldeeleelle 102
                 ++++++    +++++ ++ ++ + + lkpld e+ + l+
  KHJ31938.1 190 NKVNRKNIVDNRVHACVYFIQPTGHALKPLDIEVMRRLH 228
                 234444444455777777777555567888777766653 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 8.7
                 HHHHHHHCTSEEEE CS
    MMR_HSR1  68 kaflaleeadlill 81 
                 ++ la+ ea++ ++
  KHJ31938.1 390 EQKLAKMEAEMKMV 403
                 44444333333222 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   1.3e-06    0.0011       4      86 ..      93     167 ..      92     170 .. 0.85
   2 ?    3.4   1.7     0.053        48     120     175 ..     228     297 ..     219     446 .. 0.77

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 1.3e-06
                 EEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHH CS
    GTP_EFTU   4 rnigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisleketkkylinliDtPGHvdFske 86 
                  ni+++g    GK+TL+ +L  ++      +e+++    lD  +    + ++i+s  + +e+++ + +++++DtPG  dF+++
  KHJ31938.1  93 FNIMVVGESGLGKSTLVNTLFNSSLY--PPRERKG--PSLDIIP----KTVSIQSISADIEENGVRLRLTVVDTPGFGDFVNN 167
                 59******************966555..4447776..4589887....57999999999999999***************987 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.053
                 HTTTEEEEEEESCGST.HHHHHHHHHHHHHHHHHH..............HHHHHHHHHTTT..TTEEEEEEBT CS
    GTP_EFTU 120 kegvpiivfiNKmDrl.kaelkeiveevkqklsrk..............eeklekygekge..kevpvvfgSa 175
                   +v++i +i K+D + ++e++  ++ +  +++++              ee++ +     e  ++vp++ + a
  KHJ31938.1 228 HTKVNLIPVIAKADTMtDEEISAFKSRILADVKHHdiqifegpryelddEETIAENN---EimSKVPFAVVGA 297
                 35678**********999999999999998886667777777777755522222222...2334555555544 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.8   2.9e-06    0.0026     102     123 ..      95     133 ..      67     166 .. 0.69
   2 ?    2.6   0.0      0.13   1.2e+02      43      71 ..     227     254 ..     189     289 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 2.9e-06
                  EEEECSTTSSHHHHHHHHCTT.................- CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpe.................l 123
                  +++vG+SG GKStL+n+l ++                 +
   KHJ31938.1  95 IMVVGESGLGKSTLVNTLFNSslypprerkgpsldiipK 133
                  4679**************987455555555555444444 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.13
                  HHTT-EEEEEEE-GGG--HHHHHHHHHHH CS
  RsgA_GTPase  43 eekgiepvivlnKiDlleeeeeleelkee 71 
                   +++++++ v+ K+D +++ee ++++k++
   KHJ31938.1 227 LHTKVNLIPVIAKADTMTDEE-ISAFKSR 254
                  578999999************.5555544 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   3.7e-05     0.033      14      34 ..      95     115 ..      89     204 .. 0.79
   2 ?    2.4   3.0      0.24   2.1e+02      46      93 ..     385     441 ..     230     457 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 3.7e-05
                 EEEEESTTSSHHHHHHHHTTS CS
                 xxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllagl 34 
                 + +vGe+G GKStL+++l + 
  KHJ31938.1  95 IMVVGESGLGKSTLVNTLFNS 115
                 679*************99764 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.24
                 TCEGGGB-HHHCCHCEEEE-SS--S-TTSB..HHHH.......HHHTCHHHHHHHST CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxx.......xxxxxxxxxxxxxx RF
    ABC_tran  46 gkdlkeqeleslrkeigvlpqepqlfpelt..vren.......esdeeiekalsklg 93 
                 ++ l+eq+l ++++e+++++q++   +e++  + e+       e++e++e+ + +l+
  KHJ31938.1 385 ERTLHEQKLAKMEAEMKMVFQQKVAEKESKlkLSEEelyarhrEMKEQLERQRLELE 441
                 566777999999999999999955555554214444788555544444444443333 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   6.1e-06    0.0055      22      47 ..      90     115 ..      81     150 .. 0.85
   2 ?   -1.8   0.0       3.9   3.5e+03      83     107 ..     342     376 ..     312     443 .. 0.54

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 6.1e-06
      AAA_16  22 grpelvllsGesGvGKsslvrellra 47 
                 g   +++++GesG GKs+lv++l+++
  KHJ31938.1  90 GFNFNIMVVGESGLGKSTLVNTLFNS 115
                 5555799****************986 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 3.9
      AAA_16  83 rqlldeaesaeleawrekleeala..........a 107
                 ++l++++++a+ e +r + ++a++           
  KHJ31938.1 342 EELKEHTSNALYENYRSEKLTAMGvaqdpsvfkeV 376
                 44444444444445555444444443333333321 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       1.5   1.4e+03      44      87 ..      25      70 ..       8      74 .. 0.76
   2 !   14.9   0.0   2.8e-05     0.025       8      28 ..      95     115 ..      93     267 .. 0.91
   3 ?   -0.5   0.2       1.6   1.4e+03      44      79 ..     320     353 ..     303     438 .. 0.67

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.5
      AAA_22 44 fvtlpsst.sskdllrellralglelka.erlsseellealeqalr 87
                  t ps+t + k++++++ + + ++  + + ++  +l++ +++ l 
  KHJ31938.1 25 IRTSPSPTkGTKNIFQDIPQSVSSSDPKiAAQQAGDLRNIVRKKLT 70
                44556666799999******99999988888888888888887765 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 2.8e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleq 28 
                 ++v+GesG GK+tl+++l+++
  KHJ31938.1  95 IMVVGESGLGKSTLVNTLFNS 115
                 79****************987 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 1.6
      AAA_22  44 fvtlpsstsskdllrellralglelkaerlsseell 79 
                 +v+  + ++  +l+++l r   +elk+  ++s +l+
  KHJ31938.1 320 EVDNEEHCDFVKLRQMLIRTHMEELKE--HTSNALY 353
                 555555555555555555555555555..4444443 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   6.1e-06    0.0055       2      65 ..      95     160 ..      94     168 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 6.1e-06
                 EEEESSTTSSHHHHHHCHCT-CCC.-EEETTTTEEEEEEECGGSGGCTTB..TTTTCEEEEEEEE-S CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfs.ekekstigvdfltkevtkikgvend..kkvkkvklniWDtaG 65 
                 +++vG+sg GK++l++ + +++   ++e++  ++d++ k+v +i++++ d  ++  +++l + Dt G
  KHJ31938.1  95 IMVVGESGLGKSTLVNTLFNSSLYpPRERKGPSLDIIPKTV-SIQSISADieENGVRLRLTVVDTPG 160
                 89****************99887526777888999999987.5776654411445557778888877 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   7.9e-06    0.0071       2      63 ..      94     165 ..      93     184 .. 0.66
   2 ?   -2.2   0.6       2.4   2.2e+03     167     202 ..     362     398 ..     328     411 .. 0.58

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 7.9e-06
                 EEEEESSTTSSHHHHHHHHHTS--SS--TTTS-...-...-SS-EEEEE..EETT..EEEEEEE--SCCCTT CS
        AIG1   2 tivlvGktgnGkSaTgNsilgkkaFesklsaqs...v...tkkcqkksr..twdg..kkinViDTPglfdls 63 
                 +i++vG +g GkS+ +N++ +++ +  + ++ +   +   t + q+ s+  +++g   ++ V+DTPg  d  
  KHJ31938.1  94 NIMVVGESGLGKSTLVNTLFNSSLYPPRERKGPsldIipkTVSIQSISAdiEENGvrLRLTVVDTPGFGDFV 165
                 89*****************999997655433211112111333444444325555445789******87764 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 2.4
                 HHHHHHHHHHHHHHHHHHHHHTTTT--B-H.HHHHHH CS
        AIG1 167 keekeeQvkellelveaivkenggkpytne.lyekik 202
                 +++  +Q   + + v+  vk+++++ + ++ l +++ 
  KHJ31938.1 362 TAMGVAQDPSVFKEVNPAVKQEEERTLHEQkLAKMEA 398
                 3455566667777776555555554444430443333 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   6.3e-05     0.056       2      61 ..      95     164 ..      94     169 .. 0.70
   2 ?   -1.6   0.0         2   1.8e+03      96     132 ..     222     258 ..     210     268 .. 0.79
   3 ?   -2.5   0.2       3.9   3.5e+03     118     147 ..     384     413 ..     341     423 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.3e-05
                 EEEEESTTSSHHHHHHHHHH.SSCSSSCT.........TTSSEEEEEEEEEETTEEEEEEEEEETTSGGG CS
         Ras   2 lvlvGdsavGKtslllrfvk.dkFkeeye.........sTigvdfytkeievdgkevkleiwDTAGqeef 61 
                 +++vG+s+ GK++l++   + + ++ +           +T+ +++ +++ie +g +++l++ DT G  +f
  KHJ31938.1  95 IMVVGESGLGKSTLVNTLFNsSLYPPRERkgpsldiipKTVSIQSISADIEENGVRLRLTVVDTPGFGDF 164
                 789************98655055665544112222222577777777777777999********997766 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2
                 HHHHHSTTTSEEEEEEETTTGGGG-SS-HHHHHHHHH CS
         Ras  96 eikrvaeenvpivLvGnKvDleekravsteegeelak 132
                 e+ r  +++v+++ v  K+D  +++++s+ +++ la+
  KHJ31938.1 222 EVMRRLHTKVNLIPVIAKADTMTDEEISAFKSRILAD 258
                 5666667789999999999999999999988887775 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 3.9
                 GG-SS-HHHHHHHHHHHTSEEEEEBTTTTC CS
         Ras 118 ekravsteegeelakelglkfletSAktne 147
                 e+r++++++  ++  e+++ f +  A+++ 
  KHJ31938.1 384 EERTLHEQKLAKMEAEMKMVFQQKVAEKES 413
                 355556666666666666666666665555 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00051      0.45       1      25 [.      95     119 ..      95     126 .. 0.88
   2 ?    4.0   0.0     0.051        46     100     114 ..     150     164 ..     133     206 .. 0.82
   3 ?   -0.7   0.0       1.4   1.3e+03     131     151 ..     290     310 ..     275     317 .. 0.81
   4 ?   -3.4   3.0       9.8   8.8e+03      58      76 ..     416     437 ..     342     455 .. 0.59

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00051
                 EEEEEBTTTTHHHHHHHHHTS--S- CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilp 25 
                 i+vvG+   GKS+++n L  + + p
  KHJ31938.1  95 IMVVGESGLGKSTLVNTLFNSSLYP 119
                 89****************9988776 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.051
                 S-SEEEEE---B-SS CS
   Dynamin_N 100 vkgltlvDlPGldsv 114
                 + +lt+vD+PG+ + 
  KHJ31938.1 150 RLRLTVVDTPGFGDF 164
                 5789*******9874 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 1.4
                 EEEEEEETTS-CCC-CHHHHH CS
   Dynamin_N 131 iilavtsanhdlsnsealfla 151
                 + +av+ an++++n++ l+++
  KHJ31938.1 290 VPFAVVGANSEITNADGLKVR 310
                 55899**********999875 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 9.8
                 E...T-EB--CHHHHHHHHHHH CS
   Dynamin_N  58 k...ekkledfsevreeieket 76 
                 k   e+ +    e++e++e+++
  KHJ31938.1 416 KlseEELYARHREMKEQLERQR 437
                 1112333333334444444444 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   3.5e-05     0.032      41      65 ..      94     118 ..      68     122 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.5e-05
                   SEEEE--TTSSHHHHHHHHHHHHHT CS
  FtsK_SpoIIIE  41 hllvaGatgsGKStalntLilSlat 65 
                   +++v+G +g GKSt +ntL  S ++
    KHJ31938.1  94 NIMVVGESGLGKSTLVNTLFNSSLY 118
                   9******************988776 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   6.4e-05     0.057      24      42 ..      94     112 ..      80     124 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 6.4e-05
      AAA_29  24 atlltGpsGsGKSTllDAi 42 
                 +++++G+sG GKSTl+  +
  KHJ31938.1  94 NIMVVGESGLGKSTLVNTL 112
                 689************9654 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   7.8e-05      0.07       4      33 ..      94     123 ..      92     209 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 7.8e-05
      AAA_24   4 kiliyGpsgiGKTtlakelgpkplfidtek 33 
                 +i+++G+sg GK+tl+++l ++ l+   e+
  KHJ31938.1  94 NIMVVGESGLGKSTLVNTLFNSSLYPPRER 123
                 79****************966666655555 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       3.7   3.3e+03      52      69 ..      36      53 ..      32      62 .. 0.77
   2 ?   10.4   0.0   0.00074      0.67       1      21 [.      95     115 ..      95     135 .. 0.87
   3 ?   -1.9   0.1       4.7   4.2e+03      18      70 ..     336     390 ..     332     415 .. 0.55

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 3.7
  RNA_helicase 52 vvvidDfgqvkdeenpsd 69
                   ++++D++q++++++p++
    KHJ31938.1 36 KNIFQDIPQSVSSSDPKI 53
                  57999****998866664 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00074
  RNA_helicase   1 iwlyGpsgeGKStlakeLaka 21 
                   i+++G+sg GKStl+++L ++
    KHJ31938.1  95 IMVVGESGLGKSTLVNTLFNS 115
                   789**************9876 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 4.7
  RNA_helicase  18 LakallkklklkkkdsvysrnpeddfwdgYtgqevvvidDfgqvkdee.nps.dl 70 
                   L+++ +++lk+++++ +y +  +++   +   q+  v+ +++  +++e +    +
    KHJ31938.1 336 LIRTHMEELKEHTSNALYENYRSEKLTAMGVAQDPSVFKEVNPAVKQEeERTlHE 390
                   6666677777777777766444444444444566666666655554433333344 PP

>> Strep_SA_rep  Streptococcal surface antigen repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.2   0.00056      0.51       4      16 ..     390     402 ..     389     409 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00056
                   XXHHHHHHHHHHH CS
  Strep_SA_rep   4 eaKLakYeaeLAa 16 
                   e KLak+eae++ 
    KHJ31938.1 390 EQKLAKMEAEMKM 402
                   78*********95 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0     0.003       2.7      28      47 ..      97     116 ..      91     129 .. 0.87
   2 ?    0.6   1.9      0.57   5.1e+02     117     179 ..     385     444 ..     318     461 .. 0.59

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.003
       DUF87  28 ilgsTGsGKSntvavLleel 47 
                 ++g++G GKS++v  L+++ 
  KHJ31938.1  97 VVGESGLGKSTLVNTLFNSS 116
                 99**************9875 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.57
       DUF87 117 qrsvleealdqakakeekeklssdepveklleelkkekeelrklknqaiarlldkledllrkg 179
                 +r + e++l+++   e + k+ +++ v++ +++lk ++eel    ++ +++l++++ +l +k+
  KHJ31938.1 385 ERTLHEQKLAKM---EAEMKMVFQQKVAEKESKLKLSEEELYARHREMKEQLERQRLELEEKK 444
                 333344444433...334444444444444444443333333333344444444444444333 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.047        42       1      17 [.      97     113 ..      97     121 .. 0.91
   2 ?    4.6   0.0     0.027        24      82     124 ..     140     184 ..     127     305 .. 0.57
   3 ?   -2.5   0.3       3.9   3.5e+03     197     211 ..     386     400 ..     326     434 .. 0.57

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.047
  ATP_bind_1   1 vvGpaGsGKttfvgals 17 
                 vvG  G GK+t+v++l 
  KHJ31938.1  97 VVGESGLGKSTLVNTLF 113
                 89***********9985 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.027
  ATP_bind_1  82 ldeeleke.ed.dyllfDtPGQielfthseslakiveeLesefal 124
                 ++ ++e++  +  + ++DtPG   +++   s + iv+++e++f  
  KHJ31938.1 140 ISADIEENgVRlRLTVVDTPGFGDFVNNDGSWRPIVDNIEQRFDA 184
                 556666665445899999999999999999999999999996653 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 3.9
  ATP_bind_1 197 ykklaeaiaelleef 211
                 +  +++++a++  e+
  KHJ31938.1 386 RTLHEQKLAKMEAEM 400
                 222233333333333 PP

>> AP1AR  AP-1 complex-associated regulatory protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       9.3   8.3e+03      19      37 ..       8      26 ..       6      28 .. 0.86
   2 ?    9.3   8.8   0.00088      0.79      41     118 ..     382     457 ..     339     463 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 9.3
       AP1AR 19 efenlvesdegessqsspr 37
                +fen+  + +ges+ +s r
  KHJ31938.1  8 DFENFFIATNGESPTTSIR 26
                7999999999999999877 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00088
       AP1AR  41 eeeianlkerrydaiadkqklideklqaelaaqeeklrleeealyaaqreaa.rlakerklkeqkrqrvkervepensd 118
                 +ee   l+e++   +a+ + ++ + +q+++a +e kl+l ee lya  re   +l ++r  +e+k+ r+++    e+++
  KHJ31938.1 382 QEEERTLHEQK---LAKMEAEMKMVFQQKVAEKESKLKLSEEELYARHREMKeQLERQRLELEEKKARIESGRPLEEKG 457
                 45555566655...55666778888999**********************86267788877888888988766666665 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   7.5    0.0042       3.7     148     250 ..     340     448 ..     319     462 .. 0.56

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0042
  Exonuc_VII_L 148 qleelerrlekaikrlleekkqr..........leklasrlkspeellerkrqrldeleerleralkkqlkkkrerleelkerlkekleekkerlkk 234
                   ++eel++++++a+ ++ +++k            +++++ ++k+ ee  + ++q+l ++e++++   ++++++k+++l+  +e+l ++ +e+ke+l++
    KHJ31938.1 340 HMEELKEHTSNALYENYRSEKLTamgvaqdpsvFKEVNPAVKQ-EEERTLHEQKLAKMEAEMKMVFQQKVAEKESKLKLSEEELYARHREMKEQLER 435
                   4445555555554444433333311111111113333334433.33444567778888888888888888888888888887774455555555554 PP

  Exonuc_VII_L 235 lkerlelleekkerle 250
                   +  rle leekk r+e
    KHJ31938.1 436 Q--RLE-LEEKKARIE 448
                   4..444.555555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (465 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1686  (0.0940376); expected 358.6 (0.02)
Passed bias filter:                      600  (0.0334653); expected 358.6 (0.02)
Passed Vit filter:                       104  (0.00580066); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.65u 0.26s 00:00:00.91 Elapsed: 00:00:00.40
# Mc/sec: 3447.09
//
Query:       KHJ31939.1  [L=375]
Description: putative sh3 domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      9e-08   31.9   0.0    1.4e-07   31.2   0.0    1.3  1  SH3_9     Variant SH3 domain
    4.1e-06   26.3   0.0    7.6e-06   25.4   0.0    1.5  1  SH3_1     SH3 domain
    0.00031   20.4   0.0    0.00088   18.9   0.0    1.7  2  SH3_2     Variant SH3 domain


Domain annotation for each model (and alignments):
>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.0   2.4e-11   1.4e-07       3      48 ..     146     193 ..     144     194 .. 0.93

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 2.4e-11
       SH3_9   3 ypyepreddeLsLqrGDvitvieesedgWlegsl..tGrtGlvPanyv 48 
                  +++p   deL+L+ G+ i+v++e +dgW  +++   ++ G++P++++
  KHJ31939.1 146 MDFTPSMNDELELRSGQLIRVLHEFDDGWAMCIRldCSEQGVCPRTCL 193
                 59*******************************76889*******997 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   1.3e-09   7.6e-06       2      47 ..     144     189 ..     143     190 .. 0.94

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 1.3e-09
                 ESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEE CS
       SH3_1   2 AlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgtgkeGliP 47 
                 +  D+++++ dEL ++ G  i vl++ +dgW  + + +  ++G  P
  KHJ31939.1 144 VQMDFTPSMNDELELRSGQLIRVLHEFDDGWAMCIRLDCSEQGVCP 189
                 678**********************************999999988 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   1.5e-07   0.00088       2      54 ..     142     193 ..     141     195 .. 0.85
   2 ?   -2.8   0.0      0.92   5.5e+03      12      32 ..     247     263 ..     245     269 .. 0.72

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1.5e-07
                 EEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE..CCCEEEEEGCGE CS
       SH3_2   2 vraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev..gGrvGlfPsslv 54 
                 +r+  d++++ ++eL+++ G++i+vl    + +dgw  + +     +G+ P++++
  KHJ31939.1 142 YRVQMDFTPSMNDELELRSGQLIRVL---HEFDDGWAMCIRldCSEQGVCPRTCL 193
                 89************************...88888998887765567788888887 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.92
                 GCCB--B-TTEEEEEE..EEE CS
       SH3_2  12 dkseLsfkkGdvikvlslgsk 32 
                 +++ ++ k +d ++++   sk
  KHJ31939.1 247 SPGNITVKSND-VAIT---SK 263
                 67889999999.8888...33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2648.38
//
Query:       KHJ31940.1  [L=231]
Description: putative riboflavin synthase alpha chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.7e-45  150.5   1.5    5.7e-22   77.5   0.8    2.1  2  Lum_binding  Lumazine binding domain


Domain annotation for each model (and alignments):
>> Lum_binding  Lumazine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.5   0.8   3.2e-26   5.7e-22       1      87 []       3      89 ..       3      89 .. 0.85
   2 !   71.9   0.0   1.8e-24   3.3e-20       1      87 []     102     189 ..     102     189 .. 0.91

  Alignments for each domain:
  == domain 1  score: 77.5 bits;  conditional E-value: 3.2e-26
                 -S--SEEEEEEEEE.ECGCTTEETEES..GGGGG..TTT-EEEETTEEEEEEEEEE.SSEEEEEEEHHHHHHSSGGG--TTSEEEEEEE CS
  Lum_binding  1 tGiVeevgtvesiekeekledltielp..elakylvekGdsiavnGvcLTVvteeveeeeftvdvipeTlerttlgelkvgdkVNlEra 87
                 tGiVe++g v++++ ++  + +t++++  +   + ++ Gdsi vnG+cLTV+ +  ++++f+v v+peTl+rt+lg lk+g++VNlEra
   KHJ31940.1  3 TGIVETMGVVSELKLSGGETGTTLTIDdaSEILTDCRLGDSINVNGTCLTVT-W-NDATSFKVGVAPETLRRTNLGGLKAGSRVNLERA 89
                 8************7776666777766744444445678*************7.4.789*****************************96 PP

  == domain 2  score: 71.9 bits;  conditional E-value: 1.8e-24
                  -S--SEEEEEEEEE.ECGCTTEETEES..GGGGG..TTT-EEEETTEEEEEEEEEE.SSEEEEEEEHHHHHHSSGGG--TTSEEEEEEE CS
  Lum_binding   1 tGiVeevgtvesiekeekledltielp..elakylvekGdsiavnGvcLTVvteeveeeeftvdvipeTlerttlgelkvgdkVNlEra 87 
                  +G+V++++t+esi +++++  ++++ +  +++ky+vekG +ia++G++LTV++ + +e+ ++v++i +T+e++  +++kvgd VN+E++
   KHJ31940.1 102 QGHVDTIATIESIIPDGEALIFRFKPRdpRIMKYIVEKG-YIALDGASLTVTKVDDREGFWEVMLISYTQEKVVTAAKKVGDDVNVEVD 189
                  8************9898888888877799**********.***********9544448999**************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       484  (0.0269954); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.57
# Mc/sec: 1228.04
//
Query:       KHJ31941.1  [L=511]
Description: putative transcription factor tos4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (511 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       629  (0.0350828); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3610.03
//
Query:       KHJ31942.1  [L=440]
Description: putative cyclin ctk2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-07   30.6   4.7    1.6e-05   24.7   0.1    2.5  2  Cyclin_N     Cyclin, N-terminal domain
  ------ inclusion threshold ------
      0.051   13.8   0.8        0.2   11.9   0.3    2.2  2  DDE_Tnp_1_6  Transposase DDE domain
       0.11   12.4   0.1       0.24   11.3   0.1    1.5  1  DUF903       Bacterial protein of unknown function (DUF903)


Domain annotation for each model (and alignments):
>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.1   2.6e-09   1.6e-05      35     103 ..      70     150 ..      36     177 .. 0.75
   2 !    6.9   0.9   0.00086       5.1      37     115 ..     184     265 ..     177     272 .. 0.80

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 2.6e-09
                 HHHHHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHSSS---HHHHHHHT.............T CS
    Cyclin_N  35 idwlvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKveeisppkledlvyit.............d 103
                 i+ + ++ + ++l  +t+++a++y+++f   ++ ++++ q  +a++Ll A+K+e++   k +++ +++             d
  KHJ31942.1  70 IQTISDIRKALQLPVRTFCTAATYYHKFRLIHKDNEYQYQDAAAGALLTACKIEDT-LKKSKEILCAAhnlkvlpseqlssD 150
                 56688889999*******************9999999****************888.7777777777745555555444442 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.00086
                 HHHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHH...HSSS---HHHHHHHTTTSS-HHHHHHHH CS
    Cyclin_N  37 wlvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKv...eeisppkledlvyitdeafteeeilemE 115
                  lv++++++ l+++  ++a+n+l  ++++    k++  ++  +cL lAa +   +e  + +l+    + + + +++eile  
  KHJ31942.1 184 HLVKITKELGLEKSFYLTAYNILIDLYRTLAPLKQTSATMSFACLELAALMmneKEHLISRLHSTSLYKKCSTSRTEILETI 265
                 6999*****************998888888888999999**********995544444667777777766688888888765 PP

>> DDE_Tnp_1_6  Transposase DDE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.49   2.9e+03     114     124 ..     132     142 ..     124     142 .. 0.85
   2 ?   11.9   0.3   3.4e-05       0.2      43      88 ..     363     408 ..     356     428 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.49
  DDE_Tnp_1_6 114 lvalalNlkkl 124
                  ++++a+Nlk l
   KHJ31942.1 132 ILCAAHNLKVL 142
                  68******975 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 3.4e-05
  DDE_Tnp_1_6  43 tkkkkgrqltirpelselaekarerikseegkaeykkRaitvEgvf 88 
                  t++++g ++tir  l +++ + +e+i se++k ey++R i+vE+ +
   KHJ31942.1 363 TNATRGPEITIRFMLDAEQVRKEEEIVSEYFKTEYDEREIEVEEPI 408
                  5567788899999999999999999******************977 PP

>> DUF903  Bacterial protein of unknown function (DUF903)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1     4e-05      0.24      17      38 ..     304     325 ..     302     328 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 4e-05
                 --EE-TTTSCEEEEBTTS-EEE CS
      DUF903  17 kPelDkdtGmyeYeDeeGkevq 38 
                  P l++ +G yeY++ +G +++
  KHJ31942.1 304 DPSLNRHSGIYEYTKVNGAKQT 325
                 599***************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.20s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3394.32
//
Query:       KHJ31943.1  [L=162]
Description: putative endoplasmic reticulum protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-16   60.9   0.0    1.5e-16   60.6   0.0    1.1  1  UPF0121   Uncharacterised protein family (UPF0121)


Domain annotation for each model (and alignments):
>> UPF0121  Uncharacterised protein family (UPF0121)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.6   0.0   8.1e-21   1.5e-16     106     228 ..       1     131 [.       1     138 [. 0.89

  Alignments for each domain:
  == domain 1  score: 60.6 bits;  conditional E-value: 8.1e-21
     UPF0121 106 llPvflfallHaasytktlld........vlgsnslvvarll.kvislvesqaeniLrliAlieivlmpllivllllg.kaslllpllYyqfLklRYsS 194
                 +lP+ +++++H+a+yt+t+l         + + + +  +++  ++  +v+  +   + l+A+ ei l   +++ +l++ k s +l+++Y  fL+ RY+ 
  KHJ31943.1   1 MLPFGVYSVFHVATYTRTVLVptfeagslNASAQAPKPNSIAdNIGRFVKRYYDASMGLVAILEISLWGRILLSALTFsKGSWILLVIYTIFLRARYA- 98 
                 79*******************9**999875556666677777899********************988888877776516799***************. PP

     UPF0121 195 rrnPytreafseLrvlletlanhpscPavirsli 228
                  ++   ++ f++L++ +++l+   s+P+++r++ 
  KHJ31943.1  99 -QSSFVQTQFRNLEARIDSLVGAQSTPPAARQAW 131
                 .****************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1210.79
//
Query:       KHJ31944.1  [L=338]
Description: putative electron transfer flavoprotein alpha-subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.6e-60  203.2   1.7    4.9e-60  202.8   1.7    1.2  1  Ribosomal_L1  Ribosomal protein L1p/L10e family


Domain annotation for each model (and alignments):
>> Ribosomal_L1  Ribosomal protein L1p/L10e family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.8   1.7   2.8e-64   4.9e-60      10     203 ..      79     308 ..      58     309 .. 0.87

  Alignments for each domain:
  == domain 1  score: 202.8 bits;  conditional E-value: 2.8e-64
                   -....-EEEEEEEESSS-TTSGGG-.-EEEEE-STSTSSC..S-EEEEE-HHHHH...HHHHTT.........-SEEETCHHHHHHT-HHHHHHTCC CS
  Ribosomal_L1  10 d....esveialnlttkkpkkadqr.kpgkipLphplgke..vkiclitkdpqaeyakeakeag.......riakviglkklkkkyksfeakrkllk 92 
                   d    es++i+l+lttk ++ +++r kp k+pLphpl+++  ++icl+t dpq+++++ ++++        ri+++igl+klk+k +++ea+rkl+ 
    KHJ31944.1  79 DedplESQPIWLQLTTKSHIAPEKRlKPIKVPLPHPLNTDptTTICLFTVDPQRATKDLIASPAfpaalssRITRIIGLSKLKSKWSQYEAQRKLYR 175
                   3223366*****************************888888*************9777777778888999************************** PP

                   H-SEEEEEGGGHHHHHHHCHHHH.GGGT-S-ECC...CT.BTS-.....................HHHHHHHHCTTEEEEE-TTTSEEEEEEEETTS CS
  Ribosomal_L1  93 efdlfladdrimpllpklLGkvf.gkrkkmPipv.ltkgtvked.....................vkkevekalkstvvvrldkgtclsvkvGklsf 166
                   e+d+f+addri+++lp +LGk+f ++++k+Pip+ +++ +v ++                     ++k +e+a++s+v ++ +++t+++v++G++s+
    KHJ31944.1 176 EHDIFVADDRIIKSLPAILGKTFyKSTSKRPIPInIQH-SVPKKggkrikkvkgdpprpltdatsLAKTIEEAIESAVIYL-STSTNIAVRIGYASW 270
                   ***********************55556******6555.44443455555566669999999999****************.*************** PP

                   SHHHHHHHHHHHHHHHHHT.STTTSGSEEEEEEEETTS CS
  Ribosomal_L1 167 taeelaeNieavvkalvek.vpkkwkniksiylkttms 203
                   ++ +l eN+ea+ k+l+e+ v kkwk ++s+++k++++
    KHJ31944.1 271 SPTKLQENAEALSKFLIERiVSKKWKGLRSLHIKGAET 308
                   *******************99999**********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2586.66
//
Query:       KHJ31945.1  [L=333]
Description: putative palmitoyl-protein thioesterase precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      3e-78  263.0   0.0    3.6e-78  262.8   0.0    1.0  1  Palm_thioest  Palmitoyl protein thioesterase
  ------ inclusion threshold ------
      0.025   14.1   0.0       0.43   10.1   0.0    2.3  1  Lipase_2      Lipase (class 2)
      0.029   13.7   0.0      0.058   12.7   0.0    1.5  1  DUF915        Alpha/beta hydrolase of unknown function (DUF91
       0.15   12.4   0.0       0.27   11.6   0.0    1.4  1  DUF4188       Domain of unknown function (DUF4188)


Domain annotation for each model (and alignments):
>> Palm_thioest  Palmitoyl protein thioesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  262.8   0.0   7.9e-82   3.6e-78       1     242 []      39     295 ..      39     295 .. 0.93

  Alignments for each domain:
  == domain 1  score: 262.8 bits;  conditional E-value: 7.9e-82
  Palm_thioest   1 PvviwhGl.dsaesn.mqklaeliekli.gtyvknveigeseaedrkasffgnlndqveavckk......lelangfhaiGfSQGglflRaliercd 88 
                   P++iwhGl d+++s+ m+k+a l+e    gt+++++ +++++++dr++sffgn++ q+e+vc++      l++a  ++aiGfSQGg+flR+++erc+
    KHJ31945.1  39 PLIIWHGLgDNYKSEgMTKVAALAEVVNpGTFTYIIGLEDEPTSDRSMSFFGNVTSQIEQVCADlaahptLSTAPAVDAIGFSQGGQFLRGYVERCN 135
                   89******8888888**********98878****************************************77899*********************7 PP

  Palm_thioest  89 dkknvrnlislggpqaGvfgl.......llckvaekllasgavysklvqkslvqaqywrdpekl...eeYlkknkFLpdiNnerdhaknetykknll 175
                       vr+li++g++++G++++       +lc+va   l+s+ ++++++q+ lv+aqy+rdp+kl   + +l++++FL+diNner++ knetyk+nl+
    KHJ31945.1 136 APP-VRSLITFGSQHNGISKFqscndddYLCRVALGFLRSN-IWTNIIQNYLVPAQYFRDPSKLaeyAYFLASSNFLADINNEREE-KNETYKQNLA 229
                   665.****************7777888889***********.9*******************862225779************986.********** PP

  Palm_thioest 176 kleklvlvgfsdDtvvvPkeSslfgfykekseevpleetelYkedllGLrtLdergrlellevpgeH 242
                   +l+++v++ f+dD++v+PkeS +f+ ++  s+ +pl+e+++Yked+lGL+tLd+r+ l +++vpg+H
    KHJ31945.1 230 SLKRFVMYLFQDDETVIPKESGWFSEVNG-SSVIPLQERQMYKEDWLGLKTLDDRKALVFKTVPGRH 295
                   ************************99665.3336*******************************99 PP

>> Lipase_2  Lipase (class 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   9.6e-05      0.43     138     178 ..     156     236 ..      37     258 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 9.6e-05
    Lipase_2 138 piCnkknglnC........................................eSkfLqdiNakkkke.geavfsiwskadevi 178
                 + Cn ++   C                                        +S+fL diN++ +++ + +  +++s +  v+
  KHJ31945.1 156 QSCN-DDDYLCrvalgflrsniwtniiqnylvpaqyfrdpsklaeyayflaSSNFLADINNEREEKnETYKQNLASLKRFVM 236
                 3455.33333455555555666666667777778888888888888888889********9988773555566666665555 PP

>> DUF915  Alpha/beta hydrolase of unknown function (DUF915)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.3e-05     0.058     103     149 ..     113     155 ..      83     168 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.3e-05
      DUF915 103 kkfnavGhSmGglaltsYleeyaddkslPqlkklvtiggpfngienn 149
                 + ++a+G+S Gg     +l  y +  + P++++l+t g++ ngi + 
  KHJ31945.1 113 PAVDAIGFSQGGQ----FLRGYVERCNAPPVRSLITFGSQHNGISKF 155
                 5689********6....66666667789***************9764 PP

>> DUF4188  Domain of unknown function (DUF4188)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   6.1e-05      0.27      38      84 ..     168     216 ..     147     226 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 6.1e-05
     DUF4188  38 elGlLgaesli.g.srevllvqYwrdvesLeafakseeHreawrkfnkk 84 
                  lG+L ++ ++ + ++ ++  qY+rd  +L ++a      + ++++n++
  KHJ31945.1 168 ALGFLRSNIWTnIiQNYLVPAQYFRDPSKLAEYAYFLASSNFLADINNE 216
                 68*******99546899999**************866555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       613  (0.0341904); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2583.87
//
Query:       KHJ31946.1  [L=220]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0011   18.5   0.4     0.0011   18.5   0.4    2.1  3  Topoisom_I_N  Eukaryotic DNA topoisomerase I, DNA binding fra
  ------ inclusion threshold ------
      0.034   14.2   5.0       0.49   10.5   1.9    2.4  2  bZIP_1        bZIP transcription factor


Domain annotation for each model (and alignments):
>> Topoisom_I_N  Eukaryotic DNA topoisomerase I, DNA binding fragment
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.7      0.53   4.8e+03     188     206 ..      22      40 ..      21      46 .. 0.76
   2 ?   -0.6   0.1     0.084   7.6e+02      56      85 ..      89     117 ..      61     125 .. 0.56
   3 !   18.5   0.4   1.3e-07    0.0011      63     129 ..     143     214 ..     131     218 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.53
                   EE--TT---SEEEE-TTT- CS
  Topoisom_I_N 188 vvhdntvtwlaswkening 206
                   vv + t+ w a w  ++++
    KHJ31946.1  22 VVTKATTIWSAWWAYKLKE 40 
                   6778899999999887765 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.084
                   G-HHHHHHHHHHHHHHHHHTT----GGGEE CS
  Topoisom_I_N  56 kkevFqknffkdfkkvlkekekikelekcd 85 
                   + + F k+++k +++ lk++  i++ +k+d
    KHJ31946.1  89 SLQSFIKEYLKRLNE-LKQNCSISTNTKLD 117
                   444444444444322.34444444444444 PP

  == domain 3  score: 18.5 bits;  conditional E-value: 1.3e-07
                   HHHHHHHHHH.....HHTT----GGGEE-HHHHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHEEEETT CS
  Topoisom_I_N  63 nffkdfkkvl.....kekekikelekcdFskikeylekekekkkaltkeekkklkeekekleekygyalldg 129
                   +f+++  +++     k+++ i + +kc+++ i  ++e e +kkk+++ke+ +++ +  +k + +y++  ++ 
    KHJ31946.1 143 DFLNECLQCIstakiKSSTSIPKTTKCNYRGILGHIEPECRKKKRMEKEKMENKSKISNKSNVNYKILSVNN 214
                   5555555555433335556699***************************99999999999999**9988875 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.005        45      41      62 ..      86     107 ..      75     109 .. 0.88
   2 ?   10.5   1.9   5.4e-05      0.49      19      46 ..     181     208 ..     180     213 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.005
                 HHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  41 eNksLkseleelkkevekLksk 62 
                 +N+sL+s ++e+ k  ++Lk++
  KHJ31946.1  86 KNMSLQSFIKEYLKRLNELKQN 107
                 8999999999999999999987 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 5.4e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  19 rsRqRKqaeieeLerrvkaLekeNksLk 46 
                 ++R++K++e e+ e+++k  +k N ++k
  KHJ31946.1 181 ECRKKKRMEKEKMENKSKISNKSNVNYK 208
                 7*****************9999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1317  (0.0734564); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 1777.76
//
Query:       KHJ31947.1  [L=407]
Description: hypothetical protein EV44_g0585 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 3215.20
//
Query:       KHJ31948.1  [L=1258]
Description: hypothetical protein EV44_g2944 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.1e-19   67.9   0.0      4e-14   52.7   0.0    2.9  3  Response_reg  Response regulator receiver domain
    2.2e-18   66.8   0.0      5e-18   65.7   0.0    1.6  1  HATPase_c     Histidine kinase-, DNA gyrase B-, and HSP90-lik
      2e-14   53.4   0.2    2.4e-13   49.9   0.0    2.8  2  HisKA         His Kinase A (phospho-acceptor) domain
  ------ inclusion threshold ------
      0.038   13.9   0.0       0.08   12.8   0.0    1.4  1  KR            KR domain
      0.087   13.5   0.0       0.29   11.8   0.0    1.9  1  CCP_MauG      Di-haem cytochrome c peroxidase
       0.14   12.7   1.5         13    6.2   0.2    2.8  2  Med11         Mediator complex protein
       0.44   11.0   3.1         20    5.6   1.7    3.0  2  STAT_int      STAT protein, protein interaction domain


Domain annotation for each model (and alignments):
>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0         5   1.3e+04      70     101 ..     380     413 ..     377     417 .. 0.67
   2 !   52.7   0.0   1.6e-17     4e-14       1      72 [.    1103    1175 ..    1103    1186 .. 0.94
   3 !   11.8   0.0   7.9e-05       0.2      70     107 ..    1211    1248 ..    1202    1253 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 5
                   TTSEEEEEESSTS..HHHHHHHHHCTESEEEESS CS
  Response_reg  70 pelpviiltahse..eedavealkagaddflsKp 101
                   ++++v++++ +++   +  v+a++  a + l+K 
    KHJ31948.1 380 KSPKVLAMSVAKDaeWDADVKAIDTQALQDLTKS 413
                   4678888884443225666888888888888886 PP

  == domain 2  score: 52.7 bits;  conditional E-value: 1.6e-17
                    EEEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHH.ESEEEEESSCSSSEHHHHHHHHHHCTTTS CS
  Response_reg    1 vlivdDdplvrellrqlleeegyeevaeaedgkealellkeek.vdlillDinmpgmdGlellkeireedpel 72  
                    +l vdD+pl+++ll+++l +++  ++ +a +g ea++ +ke+  +d++++Di+mp+m+G+e+++ ir+ ++++
    KHJ31948.1 1103 ILAVDDNPLNLQLLKRYLLKREHDTIITACNGFEAVASFKEHGfFDVVFMDISMPEMSGFEATRLIRAYERSM 1175
                    899****************99999******************99***********************988665 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 7.9e-05
                    TTSEEEEEESSTSHHHHHHHHHCTESEEEESSG-HHHH CS
  Response_reg   70 pelpviiltahseeedavealkagaddflsKpfdpeeL 107 
                    ++  ++++t+ ++  d++ea  +g ddfl+Kp++ +++
    KHJ31948.1 1211 RKAYIVAVTGLASRRDREEAELCGLDDFLTKPISFAQI 1248
                    3588*****************************98876 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.7   0.0   1.9e-21     5e-18       4     111 ..     688     801 ..     686     802 .. 0.86

  Alignments for each domain:
  == domain 1  score: 65.7 bits;  conditional E-value: 1.9e-21
                 HHHHHHHHHHHHHHHHHHSTTTEEEEEEEE...EE......TEEEEEEEESSSSSTTHHHT.GTCSTTCHHCSTCHTSTSSSHHHHHHHHHHHHTTTEE CS
   HATPase_c   4 krLrqiisnlvdNavkfatkageieveika...se......ddlvisveDnGiGipkedlk.klfekfsqddstkrggggtGlGlsivkklvelmgGei 92 
                   Lr+i+ n+ +Na k+ t++g+i ++i+    ++      + l+i+v+D+G+G++ e ++ kl  +f q   +++   g+GlGlsiv ++++++gGei
  KHJ31948.1 688 GALRRIVMNIFGNAQKY-TDSGCIMIQISMrssNKsiipspEVLCIRVRDTGRGMSSEYMErKLYHPFAQ---EDSFAPGVGLGLSIVWSIINQLGGEI 782
                 579**************.999999888887555115566678*******************77777****...444569***********9999***** PP

                 EEEEETTTEEEEEEEEESS CS
   HATPase_c  93 wvesepgrGttftftlple 111
                 +++se g+Gt++ +++p e
  KHJ31948.1 783 SIRSELGKGTDVDINIPVE 801
                 **************99987 PP

>> HisKA  His Kinase A (phospho-acceptor) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.47   1.2e+03      34      56 ..     217     239 ..     202     242 .. 0.80
   2 !   49.9   0.0   9.4e-17   2.4e-13       2      66 ..     537     600 ..     536     601 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.47
                 HSSCHHHHHHHHHHHHHHHHHHH CS
       HisKA  34 teelkeyletiesearrldhlve 56 
                 ++ l+++le++ +e +++ +lv+
  KHJ31948.1 217 SQGLARFLEKASRENDQCVNLVS 239
                 578999************99996 PP

  == domain 2  score: 49.9 bits;  conditional E-value: 9.4e-17
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHC..T-HSSCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH CS
       HisKA   2 lgrflagvaHELrtPLsailgnaeaLkregklteelkeyletiesearrldhlvedlLdlsriea 66 
                 +++f+++++HE+r PL++i++ ae L+++  l+ ++ e++ ti+++++ l++ ++ +Ld+s+i +
  KHJ31948.1 537 KSDFISSISHEFRSPLHGIIASAEFLRDS-TLDASQHEFISTIQNCSETLLDTINHVLDYSKINS 600
                 89**************************6.99******************************975 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.1e-05      0.08      53     103 ..     521     573 ..     509     580 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.1e-05
                 -EEEE----TT-HHHHH.HHHHHHHHHS.S---EEEE---------TTT--HH CS
          KR  53 aevevvaaDvsdkdave.alleeikaee.ppikGvihaAgvlrdklleemtae 103
                 + ve+ ++Dv ++d+ +   +++i++e+ +p++G+i +A +lrd++l+  + e
  KHJ31948.1 521 MMVEISRLDVISSDKTKsDFISSISHEFrSPLHGIIASAEFLRDSTLDASQHE 573
                 56889999998777775268999999999******************987766 PP

>> CCP_MauG  Di-haem cytochrome c peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00011      0.29      37      85 ..     365     413 ..     345     534 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00011
                 SSSSBBEGGGEBSSS----STTGGGSSSBSTTEEBSSHHHHHHHHHHHT CS
    CCP_MauG  37 glkvslgvegrlgarnaptllnaafnkglfwdgraesleeqalgPllnp 85 
                  ++ s+g+ +  g+r++p++l ++++k   wd  ++ + +qal+ l+++
  KHJ31948.1 365 RRHSSTGARKASGRRKSPKVLAMSVAKDAEWDADVKAIDTQALQDLTKS 413
                 3448999999********************************9888742 PP

>> Med11  Mediator complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.2    0.0052        13      32      75 ..     233     300 ..     189     339 .. 0.72
   2 ?    4.5   0.1     0.017        44      45      94 ..     564     613 ..     558     673 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0052
       Med11  32 p........................eqepaseseeaqkeafkaatstffstLssvdvrLrrqIyaLee 75 
                 +                        e+  ++    ++ ++ k++ +++ + L++++v+L+r    L+e
  KHJ31948.1 233 QcvnlvsimkkalpeeedtnrvpdkESMMDQVPLSPELNQRKQKFDAYSTILDKIQVTLNRGAETLRE 300
                 0555555555555555566555555555555567777888899999****************999999 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.017
       Med11  45 keafkaatstffstLssvdvrLrrqIyaLeeagiitlessaaasagksaa 94 
                 +++ +a++++f+st+++ + +L + I++  + + i+  +++++++g+ ++
  KHJ31948.1 564 DSTLDASQHEFISTIQNCSETLLDTINHVLDYSKINSFEKKQNKSGNISN 613
                 5678899*********************9998888777777776666554 PP

>> STAT_int  STAT protein, protein interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   1.7    0.0079        20      51     116 ..     185     249 ..     174     253 .. 0.86
   2 ?    3.1   0.0     0.049   1.2e+02      49     113 ..     530     594 ..     513     598 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0079
    STAT_int  51 edeslatalleelleeleekasrlseeenflqklklreiaknlqkkyqenPleLariikeiLeeEk 116
                 e+++++ + +++++++le+k ++ ++ +   +   l ++ ++  ++ +++ ++L++i+k+ L eE+
  KHJ31948.1 185 EQKKYMHQQAKNVMKHLETKREAAERRRGAHMSQGLARFLEKA-SRENDQCVNLVSIMKKALPEEE 249
                 6888999999*************99999999999999999999.5578999************997 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.049
    STAT_int  49 npedeslatalleelleeleekasrlseeenflqklklreiaknlqkkyqenPleLariikeiLe 113
                   +++++ + +++++ +e ++ ++ +    +fl+  +l  +++++ ++ q++  +L+ +i+++L+
  KHJ31948.1 530 VISSDKTKSDFISSISHEFRSPLHGIIASAEFLRDSTLDASQHEFISTIQNCSETLLDTINHVLD 594
                 4456666777778888888888888888889********************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       789  (0.0440069); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.76u 0.27s 00:00:01.03 Elapsed: 00:00:00.42
# Mc/sec: 9060.76
//
Query:       KHJ31949.1  [L=250]
Description: hypothetical protein EV44_g3809 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-11   43.0   0.0    7.4e-11   42.3   0.0    1.3  1  rve       Integrase core domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.3   0.0   4.1e-15   7.4e-11      27     113 ..       2      89 ..       1      94 [. 0.92

  Alignments for each domain:
  == domain 1  score: 42.3 bits;  conditional E-value: 4.1e-15
         rve  27 lvvvddfsrlilaealsdemdastvlalleravarfggve...pervlsDngseytskafrefladlgirvsftrpgrpqdnGkvErfhr 113
                 l+++dd +r+ +++ ls++ + +++l+  +++va+ + +    ++++++D+ s    ++f++++++lgi+++++ ++ +++nG  Er  +
  KHJ31949.1   2 LHFTDDMTRMNFVYLLSNK-TGPNLLRHFKNFVAYAKRQFnkdVKIFRCDQESGLS-RSFEDWVNELGIEIQWSSVRTSEQNGQSERSGG 89 
                 689****************.***********999999887999*********8666.******************************866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       413  (0.0230353); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1878.38
//
Query:       KHJ31950.1  [L=156]
Description: hypothetical protein EV44_g3781 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1253.42
//
Query:       KHJ31951.1  [L=244]
Description: putative nuclear pore complex component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.4e-27   94.0   0.0    9.3e-27   93.6   0.0    1.1  1  NPCC      Nuclear pore complex component


Domain annotation for each model (and alignments):
>> NPCC  Nuclear pore complex component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.6   0.0   5.2e-31   9.3e-27       1     129 [.      22     147 ..      22     148 .. 0.89

  Alignments for each domain:
  == domain 1  score: 93.6 bits;  conditional E-value: 5.2e-31
        NPCC   1 GswenPvlkeilrRq.vnk..ErevkriiaNvllllvfnl.ikklvklllklyelkkksseeslasalyaelveklirllfllniviallkLlrkqdki 95 
                 G+w++P l+ei++Rq +     r++k+ii+N+++ +++ +  ++++k +++l++       +s++ + y+  + ++i+ ++++ni+ia+l+L+r+ d+ 
  KHJ31951.1  22 GTWQHPRLDEIVSRQnACSfdKRNIKSIIYNTGVVFAIIFaARQVTKVFPFLLH-------DSTSLKQYIRFLYYFIQAILVYNIIIAFLPLFRQTDDL 113
                 9**************75557899*********9888666515666666666666.......6788899******************************* PP

        NPCC  96 aDlpLtekQrellGLkadesseeaaelvitqpry 129
                 aD+pLt+ Qr+llGL++ +++++   +  t+pry
  KHJ31951.1 114 ADIPLTPAQRKLLGLSPLSAAHTPGSKFNTPPRY 147
                 ******************999999999******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1810.55
//
Query:       KHJ31952.1  [L=902]
Description: putative high-temperature-induced dauer-formation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.6e-291  968.1   7.0   4.1e-291  967.9   7.0    1.0  1  Hid1      High-temperature-induced dauer-formation protein
   4.1e-101  339.3   4.6   4.8e-101  339.1   4.6    1.0  1  Dymeclin  Dyggve-Melchior-Clausen syndrome protein


Domain annotation for each model (and alignments):
>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  967.9   7.0  4.5e-295  4.1e-291       1     812 []       1     830 [.       1     830 [. 0.96

  Alignments for each domain:
  == domain 1  score: 967.9 bits;  conditional E-value: 4.5e-295
        Hid1   1 MgasesklafkkaifrLgekrliaeddayweefWelpesteDvFeLltpadirkvRdenleNletLilavierlvelakhpsfpdpeqapeseaLnCvR 99 
                 Mgas+skl+fkk+ifrL+e++ i++dd+yw +fWelpes+eD+F+L++p dir++Rd++leNletLila+++rl  l++hpsfpd e ape++aLnCvR
  KHJ31952.1   1 MGASDSKLVFKKGIFRLTEESVISADDPYWASFWELPESIEDIFSLFSPVDIRRTRDTALENLETLILAITSRLFILRHHPSFPDTEFAPERDALNCVR 99 
                 *************************************************************************************************** PP

        Hid1 100 lLtrllPfifEeesleewedklfWssrkkpkrkaqvasevledesssee......eeeeekekplaeelldalvdlLFlkdFTvpapksskskveysiW 192
                 +Ltr+lP+i+E+esl ewe+++fW  r+k++rka +a +vl+des++e        ee e+ kplaeel+d+l+dlLF+ dFT+p+p +sk kv+y+iW
  KHJ31952.1 100 VLTRILPYIYEAESLREWEENFFWGVRRKRTRKAALARDVLFDESPEELakleaaGEEFEEIKPLAEELIDTLIDLLFFADFTLPRPLNSKLKVTYAIW 198
                 **********************************************9889999998899**************************************** PP

        Hid1 193 esGvgtatklpsnkeiesnRtEvLklLLtlfsetlYrspsevssngskvltylvssdnrqevltLlcSLlntvcrydpsgsglpynsvvlkdsrellVe 291
                 +sGvg++t++ + ke+esnRtE+L+lLLtl+s+++Y s++ ++++g+k++ y+v++ ++q+vl+ lcSLlnt ++y+p+++++pyn  ++kd++++lV+
  KHJ31952.1 199 KSGVGCNTSVGTSKEFESNRTEILRLLLTLTSQSMYLSINLLPVRGVKAISYIVTCPDKQVVLSFLCSLLNTSLKYNPISWRVPYNVQMFKDPKQILVT 297
                 *************************************************************************************************** PP

        Hid1 292 yclqlLlvlldypipedeklseevktertsskpkNlfriylgrlhreqdfqFlldgltriLnqplq..ssylpnsqksvkfaqelliLlwellqcNkrF 388
                 y+lqlLlv+l+ypipe+  +          + +kN+fr+++grlhr+qdfqF++dg+triLnqpl   +sy+p++q+++k   e+++L+we++qcNkrF
  KHJ31952.1 298 YALQLLLVILLYPIPENDIS----------QVKKNFFRHFIGRLHRPQDFQFIVDGMTRILNQPLLasTSYIPGNQQQSKLTSEMIMLFWEMTQCNKRF 386
                 ***************99888..........778********************************9999****************************** PP

        Hid1 389 rsfviessrvldllvlilyylveyrsdqskkglvkicvfillllSseknfgkrLnkpfeaqeslptsiripvftgtyaDfliisihkllttgkeklssl 487
                 rsf+i++ r++d+lvlil+y +e++ d+sk+g+v++cvfil++lS+e+nfgk+L k+feaqe+lp  ir+++f+gtyaDfli si++++tt+k+kl+++
  KHJ31952.1 387 RSFIIDTGRSHDFLVLILFYTIEFKIDSSKQGIVRMCVFILQTLSVEPNFGKNLRKKFEAQETLPPTIRLQNFNGTYADFLIQSIYNIITTSKGKLTAI 485
                 *************************************************************************************************** PP

        Hid1 488 vdtLleiLvnispylktLsleacskllqLlesfSspsfLlanesNhkllalllealnnviqkqfkgnrnLvYsilrkrkvfealrnltlesaseeiers 586
                 +++Ll++++n+++ l+ Ls++++skll+L++s+Ssp fLlanesNh+ll++ll+++n +++++f++n+nLvY+++ +rk+f+alr++tles++e+i+r+
  KHJ31952.1 486 YPALLAVINNVAAHLEDLSVSTSSKLLHLFASMSSPGFLLANESNHNLLHSLLDSINIILEHKFTENPNLVYAVIVNRKYFDALRSFTLESGQEKISRR 584
                 *************************************************************************************************99 PP

        Hid1 587 ne......sarldsideeeeenssessrieesrsesrspslsevpelksslaitddeskaereksat..essssqavs..................qlr 659
                  +       ++++si++ + +ns +s  + + +++sr p ls+vpe+++++a+++d ++++++++    +++s+++ +                  q+r
  KHJ31952.1 585 SRqrkefaFSSTNSISNLSCSNSTDSLLSTS-MAHSRVPALSNVPEEDAAFAVGSDGEEDTDDEHIAsiPAASPPT-KdqsrassvasesdnavpvQMR 681
                 9988888755778888888888777776666.88999999**************9999988866654014445554.3599****************** PP

        Hid1 660 emsekarakesaesteesrqesatskkspsgmsqsaeekftptsewlesWksklpLetiltllkallpkiekiaseegltdeseiLkflkdktlvgllp 758
                 +msekar+k +a+ +++srq+s ts +s+s+  +++++ f pt++w+ +W+s+lpL+t+l+++ +l + ++    + g    s + + l++ t+ g+  
  KHJ31952.1 682 RMSEKARGKLPAGMSSFSRQNSFTSLSSYSQ-KNVNTSGFEPTPAWVSKWVSELPLHTTLQIILQLHHLLSPNTRSTGEDIPSSLSSRLQNATITGV-- 777
                 *****************************87.689999*************************99999998888888888888888**********9.. PP

        Hid1 759 epspikirkfewsalslgWyesllwgviynreenvkkltavgvwndtevkLfki 812
                 epspi+i+ fews lslgWyesllw++i+ +e +v+k ++vgvwn+te+kLf++
  KHJ31952.1 778 EPSPIRIQYFEWSTLSLGWYESLLWSFIFVSEIQVSK-GTVGVWNGTEIKLFRV 830
                 9**********************************99.**************97 PP

>> Dymeclin  Dyggve-Melchior-Clausen syndrome protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  339.1   4.6  5.3e-105  4.8e-101       1     557 [.       1     735 [.       1     793 [. 0.82

  Alignments for each domain:
  == domain 1  score: 339.1 bits;  conditional E-value: 5.3e-105
    Dymeclin   1 MGassSklafrkavlqllsktqpidaddafWdqllsfslktptsvqdvfalvepaaeilalrnespgnLatLlrkaveklvelke.....scssakeqq 94 
                 MGas+Skl f+k +++l+ ++  i+add++W ++++     p s +d+f l  +  +i+  r+ + +nL+tL+  ++++l  l++        ++ +  
  KHJ31952.1   1 MGASDSKLVFKKGIFRLT-EESVISADDPYWASFWE----LPESIEDIFSL-FSPVDIRRTRDTALENLETLILAITSRLFILRHhpsfpD--TEFAP- 90 
                 **********99966655.55599***********6....888999*****.77889****************************875422..33332. PP

    Dymeclin  95 talsqalNalrllrrilkyllerasee....................................eedeeeseeaeplaeslllalvdllfcpdftvps.. 155
                    + alN++r+l+ril+y+ e++s +                                    e++ ee ee +plae+l+++l+dllf++dft+p+  
  KHJ31952.1  91 --ERDALNCVRVLTRILPYIYEAESLReweenffwgvrrkrtrkaalardvlfdespeelaklEAAGEEFEEIKPLAEELIDTLIDLLFFADFTLPRpl 187
                 ..257***************555555555566666666666668899999999999999***988889999*************************977 PP

    Dymeclin 156 k......................sdstyalrtellklLlvllseqlysppssadssafnklldgktsaenrialplvtsLLntviaydpvdesdagsgv 232
                 +                      s++++++rte+l+lLl+l s+++y + +      ++ +  + t  +++ +l++++sLLnt ++y+p+     +++v
  KHJ31952.1 188 NsklkvtyaiwksgvgcntsvgtSKEFESNRTEILRLLLTLTSQSMYLSINLLPVRGVKAISYIVTCPDKQVVLSFLCSLLNTSLKYNPI-----SWRV 281
                 2568899****************889**********************9555555444555555666***********************.....**** PP

    Dymeclin 233 pynhllfsdaaasleplveqslqlLlvlldhdktekavaeesestaeesNlfrnyLsrihreeesdadfkfilkglfrllnntvpseqtylpns..kiq 329
                 pyn  +f+d     + lv  +lqlLlv+l ++ +e+  +      ++++N fr+++ r+hr++    df+fi++g++r+ln+ +  +++y+p+   + +
  KHJ31952.1 282 PYNVQMFKDPK---QILVTYALQLLLVILLYPIPENDIS------QVKKNFFRHFIGRLHRPQ----DFQFIVDGMTRILNQPLLASTSYIPGNqqQSK 367
                 ***********...*****************99999854......6777**************....**************************99999* PP

    Dymeclin 330 fhqelllllykLlhsNkkfleyvlkrsdvldllvPiLellydaradqsrvgliyillfiLLlLSgdrnfgvrlnkliiksvpy..servpmdis..vft 424
                    e+++l++ + + Nk+f+++++ +    d+lv iL++  + + d s+ g + +++fiL  LS ++nfg++l k       +  +e++p +i    f+
  KHJ31952.1 368 LTSEMIMLFWEMTQCNKRFRSFIIDTGRSHDFLVLILFYTIEFKIDSSKQGIVRMCVFILQTLSVEPNFGKNLRKK------FeaQETLPPTIRlqNFN 460
                 ***************************************************************************9......655999*9999866888 PP

    Dymeclin 425 gtlgdLlilvlhrlitynhqrlqDkpLhtcllaiLaNvSpylknLsmvasqkLvsLlellskkwfllsaeakasddlaqelsvneelvrllleilnsiL 523
                 gt++d+li  ++ +it+   +l    ++  lla++ Nv+++l++Ls+ +s kL++L+  +s++ fll++e+            n++l+  ll  +n iL
  KHJ31952.1 461 GTYADFLIQSIYNIITTSKGKLT--AIYPALLAVINNVAAHLEDLSVSTSSKLLHLFASMSSPGFLLANES------------NHNLLHSLLDSINIIL 545
                 ***********************..**********************************************............**************** PP

    Dymeclin 524 qyqldgNsnLVYallrkrevfaalanlptdfad.................................................................. 556
                  +++ +N+nLVYa++ +r++f+al++ + +  +                                                                  
  KHJ31952.1 546 EHKFTENPNLVYAVIVNRKYFDALRSFTLESGQekisrrsrqrkefafsstnsisnlscsnstdsllstsmahsrvpalsnvpeedaafavgsdgeedt 644
                 ************************998765444666666666666666666666666666666666666666666666666666666666666666666 PP

    Dymeclin 557 ..........................................................................................p 557
                                                                                                           p
  KHJ31952.1 645 ddehiasipaaspptkdqsrassvasesdnavpvqmrrmsekargklpagmssfsrqnsftslssysqknvntsgfeptpawvskwvselP 735
                 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666662 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (902 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 6248.46
//
Query:       KHJ31953.1  [L=3849]
Description: putative fat domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.8e-70  235.8   8.0    2.1e-69  234.4   8.0    1.8  1  FAT             FAT domain
    2.1e-32  112.9   0.8    4.9e-32  111.7   0.8    1.7  1  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
      3e-06   27.0   0.0    7.1e-06   25.7   0.0    1.7  1  FATC            FATC domain
      0.002   18.5   0.6       0.14   12.5   0.0    4.4  4  FANCI_S2        FANCI solenoid 2
     0.0086   15.9   3.7        2.9    7.9   0.0    3.4  3  TPR_1           Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.025   14.8   1.3       0.52   10.7   0.1    3.2  2  TPR_8           Tetratricopeptide repeat
       0.18   11.9   0.7       0.69   10.1   0.0    2.3  2  TetR_C_35       Bacterial Tetracyclin repressor,  C-terminal 
        0.6   10.5   5.0        4.3    7.7   0.6    3.7  3  DED             Death effector domain
       0.76   10.0   9.9        3.9    7.8   0.1    4.1  4  TPR_2           Tetratricopeptide repeat
        2.3    9.0   4.7        6.9    7.5   0.5    3.7  3  TPR_6           Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> FAT  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  234.4   8.0   1.2e-72   2.1e-69       2     346 .]    2805    3155 ..    2804    3155 .. 0.97

  Alignments for each domain:
  == domain 1  score: 234.4 bits;  conditional E-value: 1.2e-72
                  CCTTCCCCTSSS.GHH..CCCCT.........TSSSS--CCCHCCC...CHH..--CCHCHHCCCHCCCCCCCCCTS---SCCCCCHHHHHCCCCCH CS
         FAT    2 plaaeaaWrlgq.Wds..meeylsvlk.....kdspdkaffeaila...lhr..nqfdeakeliekarqlldtelsalvgesynraygvlvrvQmla 85  
                  +l +e+aWr  + W s   +e l+ +       ++p++aff+a+++   lh+  + + e+ +++++a+ql ++++++l+++ ++ ++++l+ +Q+l+
  KHJ31953.1 2805 DLLLECAWRQIDnWASaeNREMLDNVIkglmdAPTPRRAFFQAFMSlikLHNkiEPLAEFTKVCDEAIQLAIRKWHQLPKRTTSAHIPLLQFFQQLV 2901
                  6899******977***7766666665588888**************8888888788***************************************** PP

                  HHCHHCCHHCSS-.........---TTTTTTT----TTS-TTTGCCCTTTCCCCTCCCHCCCHC...................HCCS-STTCCC..C CS
         FAT   86 Eleeiiqykqkls.........sseklksllktWrkRlpgcqdnvevwqdiltvRslvlspied...................llkgvkaemwl..k 152 
                  El++++++ q+l          +s +lk ll tWr+Rlp+++d++++wqd++t+R++++  i+                    +++g+++++w+  +
  KHJ31953.1 2902 ELHDASAICQSLAqtnqtnldsKSTELKLLLGTWRDRLPNVWDDINAWQDLVTWRQHIFCLINTtylnllpvqgnqnangtsfAYRGYHETAWIinR 2998
                  ***********99********99************************************************************************** PP

                  CCCCHCHHHHCCSTTHHCCCCCHCTT.....TT.TSSCCCHHHHHHHCCHHHHHSSCCHHHHCCTSSCCCSS-SS---............HH.HHCC CS
         FAT  153 fanlarksgrlslAekaLkelleedpeewlprappevvyaylKylwssgeqkealqkLreftsellekkeelqsgleaqkeptnleeftkll.arcy 248 
                  fa++ark+  +++++++L ++                      y+++++e++ea++kLre++++++++ +el+sgl+++ ++tnl++f +++ a++y
  KHJ31953.1 2999 FAHVARKHQLPEVCINQLGRI----------------------YTLPNIEIQEAFLKLREQAKCHYQNSNELSSGLDVI-NNTNLNYFGANQkAEFY 3072
                  *********************......................************************************.***************** PP

                  CTCCCCCCCCCCCT.S...-SSCCHHHHCCHHCTCCCHSTTCCCCHHHHHCCHHHHHHSSSS.S-TCCHHHHCCT..CCHHHHTTTS.STTTCHHHH CS
         FAT  249 lkkGewqealqkldwseekieeilqsysaateidpswykawhtwalfnfevvskeeeqkeeeepedlqeyvvpavkgflksislsse.nslqdtlRL 344 
                  ++kG+++e+l++       +ee+ ++++ +  id +++k w++w++++++ ++++        p+d++ ++ +a++++l+++ ++++ +s++ + R+
  KHJ31953.1 3073 TLKGMFLEKLGQ-------REEASEAFRMSLFIDVTLAKSWAEWGHYYDRLFKEN--------PTDIN-LAKDALNCYLEAAGYYKNaKSRKLLTRI 3153
                  ************.......9***********************************........99998.**************************** PP

                  HC CS
         FAT  345 Lt 346 
                  L+
  KHJ31953.1 3154 LW 3155
                  *8 PP

>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.7   0.8   2.8e-35   4.9e-32       2     249 ..    3524    3779 ..    3523    3780 .. 0.91

  Alignments for each domain:
  == domain 1  score: 111.7 bits;  conditional E-value: 2.8e-35
                      EEEEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHC..TTSTCHHHHHHHHHC CS
  PI3_PI4_kinase    2 sagiykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekk..gvpptasveslrval 92  
                      +a++ ++ +++r++e+ivq+f+ ++ +lsk ++ +rr+l+++ + +ipl+++++++++ a + +++ + d ++ k+    ++ a + ++++++
      KHJ31953.1 3524 FAIQHPAARHCRREERIVQLFRYFNGILSKRKESRRRNLNFHLPLMIPLTPHSRMVQDDATFISLQGVFDDHCRKNgmSKDDPALFTMDKMKS 3616
                      57788899*****************************************************************99976566666777766666 PP

                      HCHCCHHHHHCC.......HHHHHHTSSTTHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHT-TT--TTTEEEETTTSEEEESSTTT CS
  PI3_PI4_kinase   93 dkkklkkekklk.......fekrtalkpksgllqeFvkkspsaeewlearkqFvrslaklsvldyilgngDRhldNilvdktsgklihIDfGl 178 
                        ++ k  +++           +++ +     l++F k +p++ +++ +rkqF  ++a+l +++yil  ++R ++++ + + +g++   +   
      KHJ31953.1 3617 LIENRKSHEQIAsarleifTAVQEKWVSHTIALNYFSKIYPQFSDFWLFRKQFSYQFASLTFMTYILHMNNRYPHKLNIARITGNVWGSELMS 3709
                      666655555555778888555566667778889************************************************************ PP

                      CCTCSHCSSSS-.SSSSSS-THHHHHHTSTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCSSC CS
  PI3_PI4_kinase  179 ilpdewkllpfpqekvPfrltrelvlaidpskdeglfresceealealrrdqnlltrllkkavkdglilwe 249 
                      +l   +  +++p e vPfrlt++l+ +++p++ eg++    + + + l++++  l + l ++v+d++i w 
      KHJ31953.1 3710 SLAMGKAYFHNP-EPVPFRLTPNLQTLMGPLATEGIYSCAIMAIARCLSEPEYELEQQLCLFVRDEMIHWF 3779
                      **888888999*.*******************************************************995 PP

>> FATC  FATC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0     4e-09   7.1e-06       2      32 .]    3819    3849 .]    3818    3849 .] 0.96

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 4e-09
        FATC    2 LsveqQVdrLIkeATdpeNLaqmyiGWcPww 32  
                  L+ +q+V +LI  A++p+NLaq++  ++P++
  KHJ31953.1 3819 LPANQTVIDLIARAVSPINLAQCDALFMPYL 3849
                  899**************************96 PP

>> FANCI_S2  FANCI solenoid 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1       1.4   2.5e+03      63     114 ..      99     154 ..      71     175 .. 0.57
   2 ?   -0.4   0.0      0.72   1.3e+03      45      99 ..    1913    1966 ..    1865    2002 .. 0.72
   3 !   12.5   0.0   7.6e-05      0.14      96     159 ..    2579    2649 ..    2560    2654 .. 0.83
   4 ?   -3.4   0.0         6   1.1e+04      88     131 ..    3115    3158 ..    3113    3161 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.4
    FANCI_S2  63 iieqllsriitkseeevsqyiklLselvksapltllesssk....lkelldylsfl 114
                 i++ l++ + + +ee++   +k + +++++++ +l+++++     ++el+ +++  
  KHJ31953.1  99 IVNLLIELVRIDNEENALTSVKSIMDIMRHQTKVLQDKVQPfltlIQELFGQMEAA 154
                 55555555555555555555555555555555555555443111133333333333 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.72
    FANCI_S2   45 gsqiLlelfkvhesarseiieqllsriitkseeevsqyiklLselvksapltlle 99  
                   + +L + +      r+ i      ri+++++++++q++ ++  lv++  l + +
  KHJ31953.1 1913 IAPVLPKRCSSAPGDRNPIWAAAPRRILSEESQNIQQMTCIFNFLVRHPDLFF-D 1966
                  44555555555555677777777889999999998886666666666555554.4 PP

  == domain 3  score: 12.5 bits;  conditional E-value: 7.6e-05
    FANCI_S2   96 tllesssk.lkelldylsflpletatallkAllPLlkvseslrda......lilvLRKalfsreldaRkiA 159 
                  ++++   + + + l +l++l++++a+++  Al+P+++  +s  +       ++++L K  +sr++d R   
  KHJ31953.1 2579 EIEDIRARdIIDPLTQLQHLDSDVAHQIWVALFPIFWSATSKDERgelergMVTLLTKDYHSRQIDRRYNV 2649
                  455555555899999**********************99888887999999***************99765 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 6
    FANCI_S2   88 elvksapltllesssklkelldylsflpletatallkAllPLlk 131 
                  +l k++p +++  ++ l+  l+   +++ + +++ll+ +l Ll 
  KHJ31953.1 3115 RLFKENPTDINLAKDALNCYLEAAGYYKNAKSRKLLTRILWLLS 3158
                  688999999*999999********************99988875 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2       4.2   7.6e+03       1      23 [.     424     446 ..     424     447 .. 0.89
   2 !    7.5   0.3    0.0022       3.9       6      27 ..    2737    2758 ..    2733    2760 .. 0.91
   3 !    7.9   0.0    0.0016       2.9       1      30 [.    3069    3098 ..    3069    3100 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4.2
                 HHHHHHHHHHHHHTT-HHHHHHH CS
       TPR_1   1 akalynlGnayfklgkydeAley 23 
                 ak l n++ +  k+++  +A  y
  KHJ31953.1 424 AKLLLNMAECISKMKNKADARHY 446
                 78999*****9*****9999877 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0022
                  HHHHHHHHTT-HHHHHHHHHHH CS
       TPR_1    6 nlGnayfklgkydeAleyyekA 27  
                  n ++ y ++g++d+A + ye+A
  KHJ31953.1 2737 NAALSYEQNGMWDKAQQMYEQA 2758
                  66899****************9 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.0016
                  HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1    1 akalynlGnayfklgkydeAleyyekALel 30  
                  a+ +  +G+ + klg+ +eA e+++  L +
  KHJ31953.1 3069 AEFYTLKGMFLEKLGQREEASEAFRMSLFI 3098
                  78899********************98865 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.2      0.26   4.6e+02       6      27 ..    2737    2758 ..    2736    2759 .. 0.92
   2 ?   10.7   0.1   0.00029      0.52       1      25 [.    3069    3093 ..    3069    3096 .. 0.95

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.26
                  HHHHHHHHTT-HHHHHHHHHHH CS
       TPR_8    6 nlgsiylklgdyeeAkeyyeka 27  
                  n ++ y++ g  ++A++ ye+a
  KHJ31953.1 2737 NAALSYEQNGMWDKAQQMYEQA 2758
                  67999****************9 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00029
                  CCHHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_8    1 aeayynlgsiylklgdyeeAkeyye 25  
                  ae y ++g+ ++klg+ eeA e+++
  KHJ31953.1 3069 AEFYTLKGMFLEKLGQREEASEAFR 3093
                  789********************97 PP

>> TetR_C_35  Bacterial Tetracyclin repressor,  C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00039      0.69      31      91 ..    3327    3386 ..    3314    3397 .. 0.90
   2 ?   -3.0   0.1       4.4   7.8e+03      68     102 ..    3795    3832 ..    3788    3835 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00039
   TetR_C_35   31 akedLlpllTtdseplleaAsarlaevlaeswpqldeadaevladavvRlalShvvlPped 91  
                    e++l +l t + pll+ + +++ + +++++   +++da  l+ a+ + alS+v+  p++
  KHJ31953.1 3327 HAEEILAVLKT-AFPLLALSMETMVDQIQKHFKCTPDEDAYRLIGALLQDALSYVSRAPSS 3386
                  56899999999.9******************************************998865 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 4.4
   TetR_C_35   68 adaevladavvRlalShvvlPped...peetaadlaev 102 
                  +++++  +++v+ +lS    P+++   ++++ + +a+ 
  KHJ31953.1 3795 ESVQLNSNMIVKRTLSLAQSPAGTlpaNQTVIDLIARA 3832
                  67889999********9999986411144455556655 PP

>> DED  Death effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.6    0.0024       4.3      18      67 ..    1422    1471 ..    1408    1474 .. 0.89
   2 ?   -1.4   0.1       1.7     3e+03      50      72 ..    2700    2722 ..    2698    2724 .. 0.88
   3 ?    1.9   0.0      0.15   2.7e+02      39      72 ..    3027    3060 ..    3011    3062 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0024
                  HHHH.HHCCG.CSTTS--TT.S.HHHHHHHHHHCTSSSTTC-HHHHHHHCTT CS
         DED   18 esLk.fLlkd.elpkrklekiksglelfleLekrgllsednldlLkelLrri 67  
                  ++Lk fLl+  +lpk  l + +s+  ++++L++   ls   ld L+ lL+ +
  KHJ31953.1 1422 DALKiFLLQTsKLPKD-LLQ-NSLRPVLAKLQDPRRLSTHGLDALARLLQLL 1471
                  67999999888***99.555.5***************************976 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.7
                  TSSSTTC-HHHHHHHCTTT-HHH CS
         DED   50 gllsednldlLkelLrrikrqdL 72  
                  +l+ e+nld L el   ++  dL
  KHJ31953.1 2700 KLVRESNLDALVELYAALNEDDL 2722
                  6789**********999999998 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.15
                  HHHHHHHHHHCTSSSTTC-HHHHHHHCTTT-HHH CS
         DED   39 glelfleLekrgllsednldlLkelLrrikrqdL 72  
                    e fl+L ++ +++ +n + L + L++i++ +L
  KHJ31953.1 3027 IQEAFLKLREQAKCHYQNSNELSSGLDVINNTNL 3060
                  5789*************************99877 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1       1.6   2.9e+03       1      24 [.     424     447 ..     424     447 .. 0.91
   2 ?    7.8   0.1    0.0022       3.9       6      27 ..    2737    2758 ..    2736    2764 .. 0.90
   3 ?    6.5   0.0    0.0059        11       1      27 [.    3069    3095 ..    3069    3099 .. 0.89
   4 ?   -3.0   0.3       6.4   1.2e+04      19      28 ..    3129    3138 ..    3128    3144 .. 0.55

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.6
       TPR_2   1 aealynlGlayyklgdyeeAleaf 24 
                 a++l n++++  k+++ ++A++++
  KHJ31953.1 424 AKLLLNMAECISKMKNKADARHYL 447
                 678999***************985 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0022
       TPR_2    6 nlGlayyklgdyeeAleafekA 27  
                  n +l+y+++g +++A + +e+A
  KHJ31953.1 2737 NAALSYEQNGMWDKAQQMYEQA 2758
                  6799*****************9 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0059
       TPR_2    1 aealynlGlayyklgdyeeAleafekA 27  
                  ae +   G+ ++klg+ eeA eaf+ +
  KHJ31953.1 3069 AEFYTLKGMFLEKLGQREEASEAFRMS 3095
                  6889999*****************865 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 6.4
       TPR_2   19 eAleafekAl 28  
                  +Al+++ +A 
  KHJ31953.1 3129 DALNCYLEAA 3138
                  5666666664 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       1.9   3.4e+03       3      23 ..     427     447 ..     426     452 .. 0.88
   2 ?    7.5   0.5    0.0039       6.9       6      25 ..    2738    2757 ..    2736    2759 .. 0.91
   3 ?   -0.4   0.1       1.3   2.4e+03       7      24 ..    3076    3093 ..    3074    3094 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 1.9
                 HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAleal 23 
                 l+++a++  k++++++A+ +l
  KHJ31953.1 427 LLNMAECISKMKNKADARHYL 447
                 89*********9*****9876 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0039
                  HHHHHHHHHHHHHHHHHHHH CS
       TPR_6    6 lalsyrklgdtdkAlealer 25  
                  +alsy++ g +dkA +++e+
  KHJ31953.1 2738 AALSYEQNGMWDKAQQMYEQ 2757
                  79*****99*********98 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 1.3
                  HHHHHHHHHHHHHHHHHH CS
       TPR_6    7 alsyrklgdtdkAleale 24  
                  ++ ++klg+ ++A ea++
  KHJ31953.1 3076 GMFLEKLGQREEASEAFR 3093
                  67788999********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (3849 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       741  (0.0413297); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.55u 0.29s 00:00:01.84 Elapsed: 00:00:00.49
# Mc/sec: 23562.28
//
Query:       KHJ31954.1  [L=562]
Description: putative amp-dependent synthetase ligase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.8e-09   35.6   0.0    4.5e-07   28.8   0.0    2.1  2  AMP-binding  AMP-binding enzyme


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.0   2.5e-11   4.5e-07      27     104 ..     143     216 ..     139     264 .. 0.79
   2 !    4.8   0.0   0.00049       8.8     219     374 ..     340     538 ..     296     541 .. 0.56

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 2.5e-11
                  HHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEEEETCTC CS
  AMP-binding  27 eldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseakvliatvds 104
                  e  +++n ++++L++    + +rVai+lpns+e++++l+a++   ++++ l  +  +  l  +le+s+a ++i + + 
   KHJ31954.1 143 EITRQINIIGRYLKN---HQSKRVAIYLPNSVEFIASLFACAFFELTAILLQYDQYPTVLLSQLEKSKADTVI-AASG 216
                  566788889999986...57889**************************************************.2222 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.00049
                  HHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHH.......HHCCCHHCHHHHC............................. CS
  AMP-binding 219 lelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvleal.......lesgalkaakkak............................. 280
                  + +l al+s a + l    ++ +   l  + + + +t+ia+  + + ++       +           +                             
   KHJ31954.1 340 TLTLSALFSNADIALTAVASHSP--SLTIAARGIAPTIIAASSASMIKFhdeikqeI-----------Stplfkfihrletrcltrkgympttsflss 424
                  44555555555555544333311..23334444556666665555555533322221...........122333333444444444455555555555 PP

                  ..........CGTT.-SEEE.....EESS-EBHHHHHHHHHHHTC.EEEEEEEEGGGSSECEE...CHCTTTCTSTTS-BEE-TTEEEEEE-TTTSCB CS
  AMP-binding 281 ..........dlss.lrlvl.....lggeplspellrffralfge.evlegYGlTEttgvvtv...lpleedkkklgsvGkplpgvevkivDeetgep 358
                            + ++ lrl++      +  p+s+++l  +r  ++   ++ +  +  +++v  +   +++  +k+   + G p+   e++  D  + + 
   KHJ31954.1 425 ffsniypkigNTPGkLRLIYisslaGVDKPISSSMLSDLRIFTKSrIIYALTAPRVAGAVSQTgifDYRVCKKPEMAHFGAPVTSLELYFQDRGEYKT 522
                  555555555544455777754443349999999999999999988445555555555555533677666777778889************99865555 PP

                  EETTSEEEEEEEETTS CS
  AMP-binding 359 vpdgeeGellvrgpgv 374
                        Ge++  gp v
   KHJ31954.1 523 TDITSCGEIVATGPAV 538
                  556666********88 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (562 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       343  (0.019131); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 4216.22
//
Query:       KHJ31955.1  [L=691]
Description: putative developmental regulator flba protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-36  124.6   1.4    5.8e-35  120.1   0.6    2.6  2  RGS       Regulator of G protein signaling domain
    2.2e-22   78.9   0.0    1.8e-16   59.9   0.0    3.4  3  DEP       Domain found in Dishevelled, Egl-10, and Pleckstrin
  ------ inclusion threshold ------
      0.051   13.3   0.1        1.3    8.7   0.0    2.3  2  RGS-like  Regulator of G protein signalling-like domain


Domain annotation for each model (and alignments):
>> RGS  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.033     2e+02      49     100 ..     431     479 ..     425     486 .. 0.84
   2 !  120.1   0.6   9.8e-39   5.8e-35       1     117 [.     517     666 ..     517     667 .. 0.98

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.033
                 HHHHHHHHHTSTTSTTSSTS-HHHHHHHHHHHCSSSTTTTTTHHHHHHHHHH CS
         RGS  49 kakeIyneylapsspkelnidkklreelekrlekeqpsrklfeeaqeevfel 100
                 +a+eI   +l ++  + ++id++  ++     ++    +++f+  +++++++
  KHJ31955.1 431 EATEIATLFLTHGLMTCVHIDRQYLAQFGGSKKE---ISTIFQPTKNAIYQI 479
                 5899*********************999888555...888888888888775 PP

  == domain 2  score: 120.1 bits;  conditional E-value: 9.8e-39
                 -HHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTS......................SHHHHHHHHHHHHHHHHTSTTSTTSSTS-HHHHHHHH CS
         RGS   1 sleslledqpgrslFreFlesefseenlsFwlaveefkka......................keqeelkkkakeIyneylapsspkelnidkklreele 77 
                 +le++l+d ++r lFre l+++++eenlsF+l+v+ef ++                      ++ +e+++ a+ Iyn++lap+sp+elnid+ lr++l+
  KHJ31955.1 517 KLEKILNDAALRLLFRENLRETHCEENLSFYLDVDEFIRTcqkvikfhskasksdpnscsnlDSVKETMASAYGIYNAFLAPGSPNELNIDHMLRNQLA 615
                 589************************************************************************************************ PP

                 HHHCSS...........STTTTTTHHHHHHHHHHHHHHHHHHHHTSHHHHH CS
         RGS  78 krleke...........qpsrklfeeaqeevfellekdsypkFlkselylr 117
                 +r++k+           ++  klf+eaq++vf+l+++ds+pkF+k+++y++
  KHJ31955.1 616 TRMTKAvgqngamieslEEVTKLFQEAQNSVFKLMASDSVPKFMKNPKYEQ 666
                 *************************************************97 PP

>> DEP  Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.045   2.7e+02       2      25 ..     207     230 ..     206     234 .. 0.89
   2 !   13.0   0.0   1.4e-05     0.083      33      62 ..     262     292 ..     252     301 .. 0.85
   3 !   59.9   0.0     3e-20   1.8e-16       1      72 []     393     479 ..     393     479 .. 0.93

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.045
                 S-SCEEECTTEEESSE-HHHHHHH CS
         DEP   2 vklkdrrkhlktypncftGseavd 25 
                 ++l+ +r +l+ ++++f+ +ea+ 
  KHJ31955.1 207 LPLAPHRIRLTRIEHSFLSEEAIN 230
                 68899***************9986 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 1.4e-05
                 SSSHHHHHHHHHHHHHCTSCECSSSSHCC.- CS
         DEP  33 iedreeAvalgqlLldqgliehvedkhqe.F 62 
                  ++re A +++q++ld ++ie +++kh++ F
  KHJ31955.1 262 SMSREMARSVCQRFLDARFIESADGKHSKdF 292
                 579************************8655 PP

  == domain 3  score: 59.9 bits;  conditional E-value: 3e-20
                 SS-SCEEECT.TEEESSE-HHHHHHHHHHHHTSSSSHHHHHHHHHHHHHCTSCECSSSSHCC..............--SSSSS-EEE CS
         DEP   1 gvklkdrrkh.lktypncftGseavdWLldnldiedreeAvalgqlLldqgliehvedkhqe..............FrdskqafYqf 72 
                 gv++ ++r    + +  +ftG++ +dWL+++++++dr eA++++ l+l +gl+++v  ++q+              F+++k+a+Yq+
  KHJ31955.1 393 GVRMTSERRIgSRMFTMTFTGRATTDWLMECCTTVDRLEATEIATLFLTHGLMTCVHIDRQYlaqfggskkeistiFQPTKNAIYQI 479
                 567765555559*************************************************************************97 PP

>> RGS-like  Regulator of G protein signalling-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.025   1.5e+02      53     116 ..     430     494 ..     416     560 .. 0.72
   2 ?    8.7   0.0   0.00022       1.3      47      85 ..     580     618 ..     575     651 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.025
                 HHHHHHHHHHTSTT-TT-----HHHHHHH.....HHHHHTT---HHHHHHHHHHHHHHHHHHHHHH CS
    RGS-like  53 rvaleifstFleknallrvpvpeslalel..ekrrkelikeeilrrviqevrerakedinkqledf 116
                   a ei   Fl ++ + +v+++ +  ++    k+++  i  + +++ i ++  + k+ ++++  df
  KHJ31955.1 430 LEATEIATLFLTHGLMTCVHIDRQYLAQFggSKKEISTIF-QPTKNAIYQITSKGKDIVEMKTRDF 494
                 558899*******************999954333443333.4557777788888888888888888 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00022
                 -TTHHHHHHHHHHHHHTSTT-TT-----HHHHHHH...H CS
    RGS-like  47 tsKetrrvaleifstFleknallrvpvpeslalelekrr 85 
                 ++Ket   a+ i++ Fl ++++   +++ +l  +l  r 
  KHJ31955.1 580 SVKETMASAYGIYNAFLAPGSPNELNIDHMLRNQLATRM 618
                 68*****************************99994333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (691 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 4984.86
//
Query:       KHJ31956.1  [L=307]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 2113.94
//
Query:       KHJ31957.1  [L=388]
Description: putative sister chromatid cohesion acetyltransferase eco1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.3e-19   67.5   0.0    1.6e-18   66.4   0.0    1.5  1  Acetyltransf_13  ESCO1/2 acetyl-transferase
     0.0025   18.2   0.0     0.0064   16.9   0.0    1.8  2  Acetyltransf_7   Acetyltransferase (GNAT) domain
     0.0031   17.3   2.8      0.012   15.4   2.8    1.9  1  zf-C2H2_3        zinc-finger of acetyl-transferase ESCO
     0.0092   16.2   0.0      0.018   15.3   0.0    1.6  1  Acetyltransf_1   Acetyltransferase (GNAT) family
  ------ inclusion threshold ------
      0.014   14.9   0.9      0.022   14.2   0.9    1.3  1  Acetyltransf_15  Putative acetyl-transferase
      0.015   15.2   0.0      0.033   14.1   0.0    1.5  1  Acetyltransf_10  Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Acetyltransf_13  ESCO1/2 acetyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.4   0.0   5.3e-22   1.6e-18       2      65 ..     297     360 ..     296     364 .. 0.96

  Alignments for each domain:
  == domain 1  score: 66.4 bits;  conditional E-value: 5.3e-22
  Acetyltransf_13   2 palcGisriWvssshRrkgiAtkLldaarenfiyglelekeevAFsqPTesGkklarkyfgted 65 
                      ++++ i+r+Wv+++++rkg+A+ +++ ar+nf+y + l+k+e+A+s PT++G k++r+yf++++
       KHJ31957.1 297 KVFMSIERLWVHKNFQRKGLASMIINEARKNFLYPIVLSKNELAISWPTDDGDKFFRRYFNENS 360
                      789*********************************************************9975 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       4.3   1.3e+04      42      69 ..     131     155 ..     131     158 .. 0.46
   2 !   16.9   0.0   2.1e-06    0.0064      25      52 ..     300     327 ..     245     355 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4.3
                     HHHHHHHTTSEEEEEEEEE..THHHHHHHH CS
  Acetyltransf_7  42 GraLleaaekgiileqlel..naekaikfY 69 
                     G++L++++  g+  +  +   + ek +++Y
      KHJ31957.1 131 GKELVNCKTCGM--V--YAfwE-EKQHNLY 155
                     778888633342..2..22111.1445566 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 2.1e-06
                     TCTEEEEE-GGGTTSSHHHHHHHHTTSE CS
  Acetyltransf_7  25 aeitrlaVdpeyrgkGiGraLleaaekg 52 
                      +i+rl+V++++++kG+++ +++ a+k+
      KHJ31957.1 300 MSIERLWVHKNFQRKGLASMIINEARKN 327
                     57888*****************952222 PP

>> zf-C2H2_3  zinc-finger of acetyl-transferase ESCO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   2.8     4e-06     0.012      14      39 ..     135     157 ..     124     158 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4e-06
   zf-C2H2_3  14 sqCkeCgMvYnpgspeDeklHkkfHa 39 
                 + Ck+CgMvY+     +ek+H+ +H+
  KHJ31957.1 135 VNCKTCGMVYAF---WEEKQHNLYHQ 157
                 55********85...57899999998 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0     6e-06     0.018      55      86 ..     290     325 ..     222     354 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 6e-06
                     T....TSTTEEEEEEEEESGGGTTSSHHHHHHHHHH CS
  Acetyltransf_1  55 d....ekggvayieslaVspeyrgkGlGsaLleale 86 
                     d     ++  + ie+l+V++++++kGl+s+ ++++ 
      KHJ31957.1 290 DnknnYRKVFMSIERLWVHKNFQRKGLASMIINEAR 325
                     04444456677899*****************99875 PP

>> Acetyltransf_15  Putative acetyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.9   7.5e-06     0.022      32     109 ..     260     359 ..     232     379 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 7.5e-06
  Acetyltransf_15  32 knenkydivqykkkeeLvasvfivkkkyyslvssilieknvleiYtlyvsekyrgkGlakklLeeslkelk....................... 102
                      + + + ++++y++ + L  ++ i+++k  s ++  + +k +++i  l+v++++++kGla ++++e+ k+++                       
       KHJ31957.1 260 ERIGYAEVFDYTEYDSLEYKTEISREKQISDNK-NNYRKVFMSIERLWVHKNFQRKGLASMIINEARKNFLypivlsknelaiswptddgdkff 352
                      555667899999999999999999999888888.55667788***********************98877656666666666666666666555 PP

  Acetyltransf_15 103 knYkvdn 109
                      ++Y ++n
       KHJ31957.1 353 RRYFNEN 359
                      5555555 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   1.1e-05     0.033      53      79 ..     301     327 ..     288     336 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.1e-05
  Acetyltransf_10  53 hisllfVdpeyrgqGigkaLleaveee 79 
                       i++l V+++++++G++++++++++++
       KHJ31957.1 301 SIERLWVHKNFQRKGLASMIINEARKN 327
                      79********************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       756  (0.0421663); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2727.87
//
Query:       KHJ31958.1  [L=774]
Description: putative blumeria specific protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (774 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1176  (0.0655921); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.77u 0.30s 00:00:01.07 Elapsed: 00:00:00.46
# Mc/sec: 5097.68
//
Query:       KHJ31959.1  [L=424]
Description: putative lysophospholipase plb1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.8e-125  417.3   1.6   7.7e-125  417.1   1.6    1.0  1  PLA2_B    Lysophospholipase catalytic domain


Domain annotation for each model (and alignments):
>> PLA2_B  Lysophospholipase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  417.1   1.6  4.3e-129  7.7e-125     100     491 .]       3     376 ..       1     376 [. 0.97

  Alignments for each domain:
  == domain 1  score: 417.1 bits;  conditional E-value: 4.3e-129
      PLA2_B 100 eivdevekKkdagfnvsltDiwGralseklveaeeggvnltlsslkdaekfqeaemplPiivadgrkpgetvinlNatvfEfsPyelgswdaklnsFvp 198
                 +i +++++K++agfnvs tD wGrals +l++a +gg+++t+ss++ ++ f+++ +plP++va      +   ++ ++vfE++P+elg+wd+++ +F+p
  KHJ31959.1   3 KILNNIKSKQEAGFNVSATDFWGRALSFQLIDAPDGGPAYTFSSIALQDDFKDGSIPLPMLVATRSLSKKAQNSVISNVFEMNPFELGTWDTNIAGFAP 101
                 6899************************************************************999999999999*********************** PP

      PLA2_B 199 veylGtklsnGtvvkkgkcvagfdnaGflmgtsstlFnevlleinstsmlesllkellkkllkdlsedsedisqyapnpfkdaeeenqnatqsiveskt 297
                 +ey+G+++s Gtv+ ++ cv+gfd++Gfl+g+ st+F  ++ ++ +++       +l+++ l++l++ +++++ ++pnpf +++       ++ v+sk 
  KHJ31959.1 102 MEYIGSNFSGGTVPFNDPCVKGFDQVGFLIGATSTIFEVAISRFAKSK-----RFSLIRNKLQNLKNGKNNVAHFQPNPFFGFN----PDVNPTVKSKD 191
                 ****************************************99999888.....4467778889999999***************....8899******* PP

      PLA2_B 298 LdlvdggedgqniplvpllqkerevdvifaldnsadteeswpdgvslvatyeRvleskqvkgkkfpyvpdqntfvnlgLnkrptffGcDarnltdlsat 396
                 L lvdgg d+qn+pl pllq++r+vdvifa+d+sa+ ++  p+g++lvatyeR l+ k  +  +fp +pdqntfvnlgLnkrptffGcDa+n t     
  KHJ31959.1 192 LSLVDGGLDKQNLPLLPLLQQSRKVDVIFAVDSSANLQN-FPNGTALVATYERALKGKFNSKFSFPSIPDQNTFVNLGLNKRPTFFGCDASNITGD--- 286
                 ***************************************.9***************8888888*******************************99... PP

      PLA2_B 397 vdestpPlvvylpnekysylsnlstfklsykdseregliengfeaatqdnetdddefaacvacaiirRklerknltlpsecekcFedycwngtvd 491
                      +Pl+vy+pn+kys+ sn+stfk +y++s r+++i+ng+e +tq n t d+++ +c++ca ++R++ r+ ++ p +c++cF+ ycw+gt++
  KHJ31959.1 287 -----APLIVYIPNSKYSAASNTSTFKRKYSESLRNQIIQNGYEFSTQANGTVDPQWPVCIGCAALSRSMTRTRTPIPTACQNCFSSYCWDGTLN 376
                 .....9**************************************************************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3172.59
//
Query:       KHJ31960.1  [L=143]
Description: hypothetical protein EV44_g3323 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.37    9.0   3.4       0.35    9.1   3.4    1.0  1  CDC45     CDC45-like protein


Domain annotation for each model (and alignments):
>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   3.4   1.9e-05      0.35     139     196 ..      25     119 ..       4     143 .] 0.40

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 1.9e-05
       CDC45 139 eeeeddddeeeeeeeeedeedeeedeeeskkkrksksdeeeesddddersrkrrrse.....................................p 196
                 +++++dd+ ++    e +e +++e++e+++++r++k+++++e+    ++++++rr +                                     p
  KHJ31960.1  25 DDDSEDDSYRARRAAEANECERHERHERRERHRHQKNSKRKENVVLPTPNHEKRRGDtklrtivgregkgpldyikmlenttitmsmidfylasP 119
                 11111111112222222222222222222222222222222222222444444444434444555555555555555555555555555555550 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1198  (0.0668191); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1135.88
//
Query:       KHJ31961.1  [L=711]
Description: putative heterokaryon incompatibility protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.3e-39  133.9   0.8      1e-37  129.7   0.4    2.3  2  HET         Heterokaryon incompatibility protein (HET)
  ------ inclusion threshold ------
        0.1   12.1   0.0       0.21   11.1   0.0    1.4  1  Phage_CP76  Phage regulatory protein CII (CP76)


Domain annotation for each model (and alignments):
>> HET  Heterokaryon incompatibility protein (HET)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.7   0.4   1.1e-41     1e-37       1     146 []      52     203 ..      52     203 .. 0.89
   2 ?    2.2   0.0     0.024   2.1e+02       2      39 ..     244     281 ..     243     288 .. 0.85

  Alignments for each domain:
  == domain 1  score: 129.7 bits;  conditional E-value: 1.1e-41
         HET   1 YeaLSYvWgdskekeeievngklleltenledalqvlrk.lgerylWiDaiCInQdddkekskqvqlmadIYsnAelvivalgsesedsgllalealra 98 
                 YeaLSYvWg+++++ eie+ng +l++t++l++al++lr  ++ r+lW+DaiCInQ+d +e+++qv+lm++I+  A+ v+v+lg+++e++ +la++a+++
  KHJ31961.1  52 YEALSYVWGEPTRRAEIECNGAVLRITKSLHAALRQLRYqDKSRILWVDAICINQNDLDERAQQVSLMKSIFPMASKVLVWLGEADEKT-ELAIKAIDK 149
                 9*************************************76999*******************************************988.999999988 PP

         HET  99 lkkeklee.keielkksaek......kkellekeeraieellespwfkRvWvlQE 146
                  +  + +  + +++ ++ +k       k  ++++ +a+ +l+ +pwf R W++QE
  KHJ31961.1 150 WATFNRQYrC-NSDATRFSKfeerfaFKPGYRDTLEAVGALTYRPWFDRCWTFQE 203
                 8888888732.22223333366777777788888889999**************9 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.024
         HET   2 eaLSYvWgdskekeeievngklleltenledalqvlrk 39 
                 +aL  + g++k+k++ + n++ + + +nl+++lq++r+
  KHJ31961.1 244 NALFMCHGKEKTKRHSSKNSDSITVSRNLSRVLQITRN 281
                 67777889999989999999***************997 PP

>> Phage_CP76  Phage regulatory protein CII (CP76)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   2.4e-05      0.21      22      44 ..     428     450 ..     420     462 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.4e-05
  Phage_CP76  22 laelarkagmkaqllrnKLnPeQ 44 
                 l+e ark+g++++ll nKL+Pe 
  KHJ31961.1 428 LSEFARKIGLHKRLLHNKLSPEA 450
                 6899*****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (711 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 5052.60
//
Query:       KHJ31962.1  [L=406]
Description: putative gat domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-16   58.9   2.9    8.5e-16   58.0   2.3    1.8  2  GAT       GAT domain
     0.0035   17.2   0.0      0.015   15.1   0.0    1.9  2  VHS       VHS domain


Domain annotation for each model (and alignments):
>> GAT  GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.79   7.1e+03       5      28 ..     143     167 ..     139     170 .. 0.69
   2 !   58.0   2.3   9.4e-20   8.5e-16       1      75 [.     222     297 ..     222     299 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.79
         GAT   5 klLsemLsstepd.eellenellke 28 
                  lL e L++++ d   ++  ell e
  KHJ31962.1 143 SLLVETLNKFSRDrAYFEGIELLVE 167
                 5788888888766556666676666 PP

  == domain 2  score: 58.0 bits;  conditional E-value: 9.4e-20
         GAT   1 rnnaklLsemLsstepdeellenellkeLyetckamqpriqklieet...adeedllaelLqlNDeLnnvlerYerlk 75 
                 r++a lLse+ +st+ + e+ +nel+ eL+++c+++  +iq +i++    +d++ ++++l+++ND +nn+l++++r +
  KHJ31962.1 222 RTSASLLSEVTESTPIS-EIINNELIYELVNRCQNANLSIQTYISARnpaPDND-VMENLIETNDMINNALSKHQRTL 297
                 6899*********9977.8***************************77779999.********************976 PP

>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.7e-06     0.015      30     118 ..      66     153 ..      55     173 .. 0.80
   2 ?   -1.0   0.1      0.16   1.5e+03      30      55 ..     237     267 ..     210     296 .. 0.61

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.7e-06
                 HHHHHHCSTCHHHHHHHHHHHHHT-...SSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHCTTTCHCS.HHHHHHHHHHHHH CS
         VHS  30 icDlinekeagpkeavrlikkkins...knphvallaLklldalvkNcGskfhleiaskeflnelvklilekknsklakvkkkvlelleeWa 118
                 + D+ ++++  +kea+ li+k ++    + ph ++ +  l+ +l +N G +f  +    +f++++++l+   + ++   +++ ++e l++++
  KHJ31962.1  66 VVDACESSPLAAKEAAYLIRKFLDRdyyNRPHMQYNSVMLIRILAENPGPTFTRNLD-SKFVQTVKELLRYGQDQN---IRSLLVETLNKFS 153
                 6788999999*************9877799***********************9985.579999998665444444...7777777776665 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.16
                 HHHHHHCS.....TCHHHHHHHHHHHHHT-S CS
         VHS  30 icDlinek.....eagpkeavrlikkkinsk 55 
                 i+++in++      +  ++a  +i+  i+ +
  KHJ31962.1 237 ISEIINNEliyelVNRCQNANLSIQTYISAR 267
                 4555544444444445555555555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       887  (0.0494729); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3010.60
//
Query:       KHJ31963.1  [L=340]
Description: putative translation initiation factor eif-2b subunit alpha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.3e-51  172.7   0.0    1.1e-50  172.4   0.0    1.1  1  IF-2B      Initiation factor 2 subunit family
     0.0064   16.1   0.5     0.0088   15.7   0.5    1.3  1  AA_kinase  Amino acid kinase family


Domain annotation for each model (and alignments):
>> IF-2B  Initiation factor 2 subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.4   0.0   1.2e-54   1.1e-50       4     282 .]      34     327 ..      31     327 .. 0.88

  Alignments for each domain:
  == domain 1  score: 172.4 bits;  conditional E-value: 1.2e-54
                 SHHHHHHHHHHHHHHHHHHCCCSTHHHHHHHHHHHHHHHHTSSTS-HHHHHHHHHHHH.HHHCCTT...TSSHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       IF-2B   4 GspaiaiaalevllevikdaktskvaeLkeelrkaidlLkkarPtavslgnairrllk.eiselks...ssdvkeakksliekikelikeieeadekig 98 
                 +++++ +aa+e+l + ++  + ++v e    + ++ ++Lk+  P+++sl+   + + +  +s+lk+    ++ ++++++li + + +++++++a+e i+
  KHJ31963.1  34 PEITMPVAAIEALIQLLTITHIKTVSETLDLIINQSAYLKSQVPNSISLSAGTDLFQRfLVSSLKPnfgGASFENVRQHLIGNGRLFANRAKAARERIA 132
                 678999****************************************************95555554222799*************************** PP

                 HHHHTTC-TTEEEEEES--SHHHHHHHHHHHTT.....EEEEEEEEEXTT.TTHHHTHHHHHHHTTXEEEEEEGGGHHHHHHCTESEEEEEXSEEETTS CS
       IF-2B  99 diaaelikdgdtilTicnsktvlevlraaakek.....kkfkVivvEsrP.rlqGrltakeLvqagipvtlitdsavayvmseevdkvivGAdrilenG 191
                 +i+a ++ dg+++lT++ s++v ++l +aa+ +      +fkVi +       + r ++ +L+ +gipv  i   av+y + + v+ v+vGA++++enG
  KHJ31963.1 133 EIGAGFVRDGNVVLTHGGSRVVGSLLSKAAEVSksegnVRFKVIYLMNEEcASESRAVVSSLRAKGIPVATIGEGAVGYALGK-VSLVMVGAEGVVENG 230
                 ****************************666554666667888776555416677****************************.*************** PP

                 EEEEETTHHHHHHHHHHTTXEEEEEXXGGGBESTSSSGG........GSSXXBEXTHHHHEETTEESSTTTEEEEEBSEEEEEGGGXSEEEETTEEEXC CS
       IF-2B 192 aiankiGTsslAvlAkefnipvlvvaeslkfservqlde........difieerdpeellnitgeriaeeelkvvnpafDvtPpelItliITevGvlpp 282
                 +i+++ GT+++A+lAk++  p++v+ae++kf++ ++l++        +i  e +d++e+ n+t   +  ++++  n ++D tPp lI++iI+e Gvl+p
  KHJ31963.1 231 GIISRLGTYQIALLAKAAGKPFYVAAETHKFVRIYPLGQydlgieqnVIKYETQDENEVHNVTPSAK--ADIESANALVDFTPPALISAIISESGVLTP 327
                 ************************************9872222222234567788888888888766..47**************************98 PP

>> AA_kinase  Amino acid kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.5   9.8e-07    0.0088       7     107 ..     101     208 ..     100     264 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 9.8e-07
                 E-TTCCCCTCC..............HHHHHHHHHHHHHHHHTTEEEEEE--HHHHHHHHHHTCCCCCHHHC........E..HHHHHHHHHHHHHHHHH CS
   AA_kinase   7 lGGssltdkee..............aslrrlaeqiaalkesgnklvvVhGggsftdgllalksglssgelaa....glrstleeagevatrdalaslge 87 
                 +GG+s+++  +              a+ +r+ae+ a ++++  ++v+ hGg+ ++  ll++++++s++e +                ++ ++++as  +
  KHJ31963.1 101 FGGASFENVRQhligngrlfanrakAARERIAEIGAGFVRD-GNVVLTHGGSRVVGSLLSKAAEVSKSEGNVrfkvI----------YLMNEECASESR 188
                 67777776666677777777766656677777777777555.589****************8888888887322221..........222277777777 PP

                 HHHHHHHHTTHGEEEE-GGG CS
   AA_kinase  88 rlvaallaaglpavglsaaa 107
                  +v++l a+g+p   +   a
  KHJ31963.1 189 AVVSSLRAKGIPVATIGEGA 208
                 77777777777666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       318  (0.0177366); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2576.99
//
Query:       KHJ31964.1  [L=262]
Description: putative adaptin ear-binding coat-associated protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-52  176.7   0.0    3.2e-52  176.2   0.0    1.3  1  DUF1681   Protein of unknown function (DUF1681)


Domain annotation for each model (and alignments):
>> DUF1681  Protein of unknown function (DUF1681)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.2   0.0   1.8e-56   3.2e-52       2     147 ..      18     188 ..      17     189 .. 0.93

  Alignments for each domain:
  == domain 1  score: 176.2 bits;  conditional E-value: 1.8e-56
     DUF1681   2 ervllvakevhvYkippltsskgyraadwtl...ekeiftgrlrvlekg...........ekvdikLedkstgelfaaapvetkeaavekvlDSsRyFv 86 
                 +rvl+++ +v vY+ippl s+kgy+aa+wt+   ++ ift+rlr+le+             + di+Led+++++lfaaap+ t++++v+++lDSsR+F+
  KHJ31964.1  18 QRVLYKSCSVSVYNIPPLVSNKGYNAASWTAgnnKRLIFTARLRILETTipsssdpstekLRFDIVLEDPKDEQLFAAAPY-TRPEVVQQALDSSRFFA 115
                 89****************************9999999*********************9999*******************.99*************** PP

     DUF1681  87 lrvedekgrkavlGigFeeRseafdfnvaLqearkvlk..............kekeaeekkdysLkeGetikinl 147
                 +rve+e grka+lGigFeeR+eafdf+v+Lqe+r++l+                 ++++++d+sLkeGe + ++l
  KHJ31964.1 116 IRVEGEGGRKATLGIGFEERNEAFDFSVTLQEVRRTLEfrdigsfseakdpgI--KENKERDFSLKEGEMVVVDL 188
                 **************************************999999876433210..337788**********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1989.38
//
Query:       KHJ31965.1  [L=372]
Description: putative dna pantothenate metabolism flavo protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-13   51.3   0.0    1.6e-05   24.8   0.0    3.2  3  DFP       DNA / pantothenate metabolism flavoprotein


Domain annotation for each model (and alignments):
>> DFP  DNA / pantothenate metabolism flavoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   8.9e-10   1.6e-05       4      55 ..      44      97 ..      41     110 .. 0.87
   2 !    4.9   0.0    0.0011        20      78     108 ..     172     204 ..     121     222 .. 0.74
   3 !   17.9   0.0   1.2e-07    0.0022     112     172 ..     239     301 ..     225     313 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 8.9e-10
                -EEEEEES-EEEECCT..TEEEEE----HHHHHHHHHHHHTT-EEEEEE-S-SS CS
         DFP  4 kkvlvtaGpTrEaiDp..VRfisNrSSGkmGyalAeaaaarGaeVtlvsgpvsl 55
                + vl+t+G+T+ ++ +  VRfi N S G+ G++ Ae ++++G  V + + + sl
  KHJ31965.1 44 RLVLITSGGTIVPLEKrtVRFIDNFSAGTRGATSAEYFLEAGYAVIFLHRQFSL 97
                679***********9555*****************************9988654 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0011
                 HHHTT-SEEEE---S--EEE..S---------- CS
         DFP  78 ealkeadivimaAAvaDyrp..keaaeeKikke 108
                 + l+++ ++  aAAv+D+ +  ++  e+Ki+ +
  KHJ31965.1 172 RPLAASGLLYLAAAVSDFFIpsERMPEHKIQST 204
                 33456688899******9875556678888863 PP

  == domain 3  score: 17.9 bits;  conditional E-value: 1.2e-07
                 ..----EEE---HHHHHHHC-S.S-EEEEEEE-SS..-HHHHHHHHHHHTT-SEEEEEEGGGT CS
         DFP 112 eeltleleknpdilaelaekkkkkqllvGFaaete..ellenareklerkgldlivaNdvske 172
                 ++l ++l + p+ l++l e+ +++ ++v F++et+   l+++a+  ler +  l++ N + ++
  KHJ31965.1 239 KRLIVDLDPLPKFLKKLVEEWAPEGMIVSFKLETDpdILIQKAQYSLERYQHHLVIGNLLATR 301
                 4677999**********99999999*********55589*******************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2960.90
//
Query:       KHJ31966.1  [L=371]
Description: putative phosphopantetheinyl transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-08   33.3   0.0    1.8e-07   31.3   0.0    2.0  1  ACPS      4'-phosphopantetheinyl transferase superfamily


Domain annotation for each model (and alignments):
>> ACPS  4'-phosphopantetheinyl transferase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.0     1e-11   1.8e-07       2      90 ..     139     290 ..     138     316 .. 0.81

  Alignments for each domain:
  == domain 1  score: 31.3 bits;  conditional E-value: 1e-11
                 EEEEEEEHHHHH.HHH----........-HHHHHS-HHHHHHHTT--HHHH................................................ CS
        ACPS   2 vGiDieklsrlrkrvkrrga........kilkrifteeErkllkssdeear................................................ 44 
                 vG+Di+++++ r +  ++ +        +i+++++ + E+  l++ +   +                                                
  KHJ31966.1 139 VGTDIVCITERRLEDYKHIDingffdwlSIFDEVLADTELIDLEQGSVGLEdlniyiegaemtsegnqvlskcerrnqkvslpilihgapsviqvdsnm 237
                 9*****999888665555559*99*********************4444444566666666677777888888888999******************** PP

                 .....HHHHHHHHHHHHHHHHHTTS-SSS..S--GGG-EEEE-TTS-EEEE-S CS
        ACPS  45 .....aelfarlWaaKEAllKalgpglrk..lldfksievledstgrptlell 90 
                       ++f++lW++ E+++K++g++l+   l+d++ +++   ++g+  ++l 
  KHJ31966.1 238 iidnkLRKFYALWCLRESYIKMTGEALSApwLRDLEILQIKVPKQGKENINLQ 290
                 ***************************77789999999999888888888843 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2712.91
//
Query:       KHJ31967.1  [L=133]
Description: hypothetical protein EV44_g3700 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0017   18.0   0.0     0.0025   17.5   0.0    1.2  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   1.4e-07    0.0025       1      44 [.      77     120 ..      77     130 .. 0.95

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.4e-07
  Retrotran_gag_2   1 wkkkdakalalIvlsisdsllelvkeektakevWdkLkelyekk 44 
                      w +kd +a ++I+  +++s   + ++++take++d ++++++ +
       KHJ31967.1  77 WTTKDLQAYSIILRRLDPSIRPESNNTQTAKELYDMIASTHKPS 120
                      999**************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       278  (0.0155056); expected 358.6 (0.02)
Passed bias filter:                      245  (0.013665); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 1058.16
//
Query:       KHJ31968.1  [L=1146]
Description: putative arid bright domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-13   51.5   0.0    1.2e-13   51.5   0.0    2.5  2  ARID         ARID/BRIGHT DNA binding domain
     0.0037   16.6   0.4      0.046   13.0   0.4    2.5  1  BAF250_C     SWI/SNF-like complex subunit BAF250/Osa


Domain annotation for each model (and alignments):
>> ARID  ARID/BRIGHT DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   2.8         2   1.8e+04      42      65 ..     356     379 ..     304     392 .. 0.63
   2 !   51.5   0.0   1.3e-17   1.2e-13       3      90 .]     430     515 ..     428     515 .. 0.89

  Alignments for each domain:
  == domain 1  score: -4.3 bits;  conditional E-value: 2
                 T.SSHHHHTT.CHHHHHHHHHTS-. CS
        ARID  42 r.GGfrkvtqknkWeevaqklglpr 65 
                 +  G+++  q+++ ++++ +++l++
  KHJ31968.1 356 QpQGHQQQ-QQQQQQRLLYQMQLQQ 379
                 23455553.3445556666666644 PP

  == domain 2  score: 51.5 bits;  conditional E-value: 1.3e-17
                 HHHHHHHHHHHHHTTS.SSS----SSSS-STTHHHHHHTTTSSHHHHTT.CHHHHHHHHHTS-..-.......HHHHHHHHHHHHHHHH CS
        ARID   3 eeFlstLkqfhenrgt.lkkiPviggkevdlykLyraVikrGGfrkvtqknkWeevaqklglpredpeasesvaqalksiYeryLlpyE 90 
                 e+F+++L +f++ ++  l+  P ig++ v l  Ly +V k+GG+++v++ + W +va+ l+++  +   +  +   lk iYer+L  +E
  KHJ31968.1 430 ENFMKSLVSFMQAKKLpLEIKPIIGNRAVSLASLYSTVAKFGGYKAVEAIKGWGDVASALQFHSIE---QRLAPLLLKGIYERNLFLFE 515
                 79***********999556669*************************9999***********7433...3467789*********9998 PP

>> BAF250_C  SWI/SNF-like complex subunit BAF250/Osa
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.4   5.1e-06     0.046       4      45 ..     829     865 ..     827     958 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.1e-06
    BAF250_C   4 kRclcvSnilRsLsfvpgndtelakhkalllilgrllllhhe 45 
                  R +c+ +ilR+Lsf ++n+  la +      + ++l +  +
  KHJ31968.1 829 DRLICITTILRNLSFYEANHPLLADEL-----IIKFLCVVIR 865
                 599*****************9999863.....2233333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2820  (0.157287); expected 358.6 (0.02)
Passed bias filter:                      648  (0.0361426); expected 358.6 (0.02)
Passed Vit filter:                       336  (0.0187406); expected 17.9 (0.001)
Passed Fwd filter:                       102  (0.00568911); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 2.28u 0.41s 00:00:02.69 Elapsed: 00:00:00.70
# Mc/sec: 4935.05
//
Query:       KHJ31969.1  [L=135]
Description: putative mitochondrial large ribosomal subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-28   97.4   0.5    1.4e-27   95.8   0.3    1.7  2  Img2      Mitochondrial large subunit ribosomal protein (Img2
    0.00031   21.2   0.8    0.00055   20.4   0.8    1.4  1  SUI1      Translation initiation factor SUI1
  ------ inclusion threshold ------
       0.02   15.3   0.0      0.025   15.0   0.0    1.3  1  Latarcin  Latarcin precursor


Domain annotation for each model (and alignments):
>> Img2  Mitochondrial large subunit ribosomal protein (Img2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.29   1.7e+03      21      49 ..      22      50 ..      13      52 .. 0.68
   2 !   95.8   0.3   2.3e-31   1.4e-27       2      80 .]      54     135 .]      53     135 .] 0.96

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.29
        Img2 21 rggtkkltvirkieGDiaalredLrkale 49
                ++ + +lt++ +++  +aa ++ +++al+
  KHJ31969.1 22 HRFQSHLTTLNQVKEPLAAQKTSINTALK 50
                45567888888887777777777777765 PP

  == domain 2  score: 95.8 bits;  conditional E-value: 2.3e-31
        Img2   2 pYfvrRtrsgslPVYtdvkrggtkkltvirkieGDiaalredLrkalee...lvkvnevtgkieikGdrveevkkfLeskgF 80 
                  Y v+Rt+s++lP+Y+ +k+gg+kk+t irki+G++++lr+dLrkal+     +++n++tg++ +kG+ ++e+ kfL++++F
  KHJ31969.1  54 GYKVERTPSNQLPIYHLIKNGGNKKITRIRKIQGNLQELRNDLRKALNLtdkECTINSTTGHVLVKGHKKQEISKFLTDQNF 135
                 59**********************************************76666**************************998 PP

>> SUI1  Translation initiation factor SUI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.8   9.3e-08   0.00055      11      73 ..      72     133 ..      67     135 .] 0.79

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 9.3e-08
        SUI1  11 qrggrKkvTtvsgleaf....gidlkklakelkkkfacsgsvvkdggeeiqvQGdqrkkvaelLtek 73 
                 + gg+Kk+T+++ ++ +    + dl k+++   k++  ++++   g   + v G  ++++ ++Lt++
  KHJ31969.1  72 KNGGNKKITRIRKIQGNlqelRNDLRKALNLTDKECTINSTT---G--HVLVKGHKKQEISKFLTDQ 133
                 6789*******8774332222677888888888888888886...5..7****************98 PP

>> Latarcin  Latarcin precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   4.2e-06     0.025      30      57 ..      79     106 ..      44     124 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 4.2e-06
    Latarcin  30 vnnlRkvqgRLeemvenlrkvedledtE 57 
                 + ++Rk+qg L+e+ ++lrk  +l d E
  KHJ31969.1  79 ITRIRKIQGNLQELRNDLRKALNLTDKE 106
                 5689*******************99988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       772  (0.0430587); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1040.51
//
Query:       KHJ31970.1  [L=891]
Description: putative pumilio domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.7e-60  195.5  18.4    1.1e-08   34.3   0.1    8.7  8  PUF       Pumilio-family RNA binding repeat
  ------ inclusion threshold ------
      0.019   15.3   6.0         11    6.4   0.6    4.5  6  CPL       CPL (NUC119) domain
      0.038   13.8   0.7         48    3.8   0.0    4.0  4  sCache_2  Single Cache domain 2


Domain annotation for each model (and alignments):
>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.1   1.7e-08    0.0001       5      35 .]     514     544 ..     512     544 .. 0.95
   2 !   34.3   0.1   1.8e-12   1.1e-08       1      31 [.     546     576 ..     546     578 .. 0.91
   3 !   26.8   0.1   4.4e-10   2.7e-06       2      34 ..     583     616 ..     582     616 .. 0.93
   4 !   25.0   0.1   1.6e-09   9.8e-06       7      35 .]     624     652 ..     618     652 .. 0.88
   5 !   24.7   0.0     2e-09   1.2e-05       2      31 ..     655     684 ..     654     688 .. 0.85
   6 !   24.5   0.1   2.4e-09   1.4e-05       9      34 ..     698     723 ..     695     723 .. 0.91
   7 !   21.5   0.0   2.2e-08   0.00013       2      34 ..     727     759 ..     726     760 .. 0.93
   8 !   22.9   0.1   7.4e-09   4.4e-05       7      28 ..     775     796 ..     771     803 .. 0.79

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 1.7e-08
                 GHHHHHTSTTHHHHHHHHHHHSCHHHHHHHH CS
         PUF   5 nlvqLstdqyGnyvvQkllehateeqkklil 35 
                 ++v+ + dq+G++++Q+ le+a + +k++i+
  KHJ31970.1 514 HIVEFCGDQHGSRFIQTKLETANSDDKEQIF 544
                 7999999**********************97 PP

  == domain 2  score: 34.3 bits;  conditional E-value: 1.8e-12
                 HHGGGHHHHHTSTTHHHHHHHHHHHSCHHHH CS
         PUF   1 sikgnlvqLstdqyGnyvvQkllehateeqk 31 
                 +i++n +qL+td yGnyv+Qkl+eh   +qk
  KHJ31970.1 546 EIQPNALQLMTDVYGNYVIQKLFEHGNQVQK 576
                 689*********************9888776 PP

  == domain 3  score: 26.8 bits;  conditional E-value: 4.4e-10
                 HGGGHHHHHTSTTHHHHHHHHHHH.SCHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQklleh.ateeqkkli 34 
                 +k+++ +Ls   yG++vvQk leh ++  q +li
  KHJ31970.1 583 LKNHVMELSLQMYGCRVVQKALEHvLDDQQARLI 616
                 89**********************9999998876 PP

  == domain 4  score: 25.0 bits;  conditional E-value: 1.6e-09
                 HHHHTSTTHHHHHHHHHHHSCHHHHHHHH CS
         PUF   7 vqLstdqyGnyvvQkllehateeqkklil 35 
                  ++++dq+Gn+vvQk +e+ +++ +++i+
  KHJ31970.1 624 MKCVKDQNGNHVVQKAIERVPSKYIQFII 652
                 5789****************999999996 PP

  == domain 5  score: 24.7 bits;  conditional E-value: 2e-09
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqk 31 
                 ++g+++ L++++yG++v+Q++le +++ ++
  KHJ31970.1 655 FQGKVEFLAVHPYGCRVIQRILEFCKPHDQ 684
                 5678888*****************998665 PP

  == domain 6  score: 24.5 bits;  conditional E-value: 2.4e-09
                 HHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   9 LstdqyGnyvvQkllehateeqkkli 34 
                 L+++qyGnyv+Q++++h t  ++++i
  KHJ31970.1 698 LISHQYGNYVIQHVIQHGTAQDRDKI 723
                 899**************999998876 PP

  == domain 7  score: 21.5 bits;  conditional E-value: 2.2e-08
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkkli 34 
                  +g+l++ s+++++++vv++++   +eeq++++
  KHJ31970.1 727 VSGKLLKFSKHKFASNVVERCIIFGSEEQRRQM 759
                 5799******************99*****9986 PP

  == domain 8  score: 22.9 bits;  conditional E-value: 7.4e-09
                 HHHHTSTTHHHHHHHHHHHSCH CS
         PUF   7 vqLstdqyGnyvvQkllehate 28 
                 + +++dq+Gnyv+Qkll ++  
  KHJ31970.1 775 QLMMKDQFGNYVIQKLLAKLNG 796
                 5689*************88554 PP

>> CPL  CPL (NUC119) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.22   1.3e+03      65      98 ..     513     547 ..     507     577 .. 0.66
   2 ?    6.4   0.6    0.0018        11      59     121 ..     579     639 ..     572     649 .. 0.75
   3 ?    3.9   0.0     0.011        65      59     134 ..     651     715 ..     641     722 .. 0.64
   4 ?    4.3   0.1    0.0079        47      58      99 ..     686     727 ..     682     737 .. 0.87
   5 ?    2.0   0.1     0.041   2.5e+02      69     132 ..     733     792 ..     723     800 .. 0.74
   6 ?    1.3   0.1     0.067     4e+02      65      95 ..     772     802 ..     753     832 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.22
         CPL  65 knaeellsdnlgsqfvaevLlsaegdkq.eaieai 98 
                  ++ e+  d+ gs f++  L++a+ d++ +++++i
  KHJ31970.1 513 YHIVEFCGDQHGSRFIQTKLETANSDDKeQIFREI 547
                 56667777888888888888888776653444444 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0018
         CPL  59 llsaiaknaeellsdnlgsqfvaevLlsaegdkqeaieaiaklakgdlvaeekdeelhliekp 121
                 l + +++++ el  +  g+ +v+++L++   d+q  +  i +l  + ++  ++++ +h+++k 
  KHJ31970.1 579 LAQQLKNHVMELSLQMYGCRVVQKALEHVLDDQQARL--IEELKVDIMKCVKDQNGNHVVQKA 639
                 788999***********************99999554..333333333334466778888765 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.011
         CPL  59 llsaiaknaeellsdnlgsqfvaevLlsaegdkqeaieaiaklakgdlvaeekdeelhliekpfgsrlLKaLiqgd 134
                 +++a + ++e l  +  g+ +++ +L+ ++  +q  i   +k +         + +  li++++g+ ++++ iq++
  KHJ31970.1 651 IIDAFQGKVEFLAVHPYGCRVIQRILEFCKPHDQANI---LKEL--------HECSEMLISHQYGNYVIQHVIQHG 715
                 5666667777777777777777777777776666444...2222........223456788888888888888888 PP

  == domain 4  score: 4.3 bits;  conditional E-value: 0.0079
         CPL  58 allsaiaknaeellsdnlgsqfvaevLlsaegdkqeaieaia 99 
                 ++l+ + +  e l+s++ g  ++++v+++ + ++++ i++i+
  KHJ31970.1 686 NILKELHECSEMLISHQYGNYVIQHVIQHGTAQDRDKIQNIV 727
                 688899999999999999999999999999999999888886 PP

  == domain 5  score: 2.0 bits;  conditional E-value: 0.041
         CPL  69 ellsdnlgsqfvaevLlsaegdkqeaieaiaklakgdlvaeekdeelh.liekpfgsrlLKaLiq 132
                 ++ +++++s +v  ++   +++++  + +++++ + d      + +l  +++++fg+ ++++L++
  KHJ31970.1 733 KFSKHKFASNVVERCIIFGSEEQRRQMASLLTASNID-----GTSSLQlMMKDQFGNYVIQKLLA 792
                 5567899999999999999999999998888777777.....44444404555999999998876 PP

  == domain 6  score: 1.3 bits;  conditional E-value: 0.067
         CPL  65 knaeellsdnlgsqfvaevLlsaegdkqeai 95 
                 ++++ +++d++g  +++++L + +g++++++
  KHJ31970.1 772 SSLQLMMKDQFGNYVIQKLLAKLNGNEKSIF 802
                 5667789999999999999999888888443 PP

>> sCache_2  Single Cache domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.32   1.9e+03      85     107 ..     521     544 ..     519     550 .. 0.84
   2 ?    3.2   0.0     0.012        70      82     113 ..     554     585 ..     545     589 .. 0.86
   3 ?    1.4   0.0     0.042   2.5e+02      83     100 ..     627     644 ..     622     652 .. 0.85
   4 ?    3.8   0.0     0.008        48      82     107 ..     777     802 ..     761     810 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.32
    sCache_2  85 DanGkyiirelvkeak.kkgggfv 107
                 D++G ++i+  +++a+ +++++++
  KHJ31970.1 521 DQHGSRFIQTKLETANsDDKEQIF 544
                 99*************966666665 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.012
    sCache_2  82 nlkDanGkyiirelvkeakkkgggfvtylwkk 113
                  ++D+ G+y+i++l + +++ ++++  ++ k+
  KHJ31970.1 554 LMTDVYGNYVIQKLFEHGNQVQKRVLAQQLKN 585
                 589****************9888888877776 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.042
    sCache_2  83 lkDanGkyiirelvkeak 100
                 +kD+nG++++++ ++ + 
  KHJ31970.1 627 VKDQNGNHVVQKAIERVP 644
                 89***********99875 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.008
    sCache_2  82 nlkDanGkyiirelvkeakkkgggfv 107
                  +kD+ G+y+i++l+++ +++++ ++
  KHJ31970.1 777 MMKDQFGNYVIQKLLAKLNGNEKSIF 802
                 589**************997776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (891 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       728  (0.0406046); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.27s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 5707.89
//
Query:       KHJ31971.1  [L=195]
Description: putative pre-mrna-splicing factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.5e-11   42.4   0.0    6.5e-11   41.9   0.0    1.2  1  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
     0.0011   18.9   0.0     0.0017   18.3   0.0    1.3  1  Nup35_RRM_2  Nup53/35/40-type RNA recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.9   0.0   7.2e-15   6.5e-11       1      69 [.       8      76 ..       8      77 .. 0.95

  Alignments for each domain:
  == domain 1  score: 41.9 bits;  conditional E-value: 7.2e-15
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69
                l+V+++   +  ++L   F+ +G+ ++++++  +t  s+ fafVe+es++dA++A  ++++k l+  e+
  KHJ31971.1  8 LYVTGFGIATRARDLAYEFERYGRLVRCDIPAPRTAASRLFAFVEYESRRDADDAYHEMHNKRLDRDEI 76
                7999999999****************************************************9998766 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   1.9e-07    0.0017       2      53 .]       6      63 ..       5      63 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 1.9e-07
  Nup35_RRM_2  2 twvaVsGydtelielVleh.FasfGeIvkhyvp.....kevsvmyvkfesekdaekAL 53
                 t+  V+G+  ++++  l++ F+ +G+ v+ ++p      ++ +++v++es++da+ A+
   KHJ31971.1  6 TTLYVTGFGIATRARDLAYeFERYGRLVRCDIPaprtaASRLFAFVEYESRRDADDAY 63
                 778899998888866666559*****************99***************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1488.80
//
Query:       KHJ31972.1  [L=1039]
Description: putative serine threonine protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.3e-69  232.8   0.1    9.2e-69  231.7   0.1    1.6  1  Pkinase        Protein kinase domain
    9.6e-39  133.2   0.2    3.7e-38  131.3   0.2    1.8  1  Pkinase_Tyr    Protein tyrosine kinase
    9.4e-20   70.1   1.2    1.6e-19   69.4   0.2    1.9  2  KA1            Kinase associated domain 1
    5.1e-08   32.3   0.0    5.1e-08   32.3   0.0    2.0  2  Haspin_kinase  Haspin like kinase domain
    7.8e-05   22.1   0.0    0.00036   20.0   0.0    2.0  2  Kinase-like    Kinase-like
    9.4e-05   21.9   0.4    0.00018   21.0   0.4    1.3  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0037   17.2   0.0      0.013   15.5   0.0    1.8  2  APH            Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.027   14.1   0.1      0.053   13.1   0.1    1.4  1  WaaY           Lipopolysaccharide core biosynthesis protein (
      0.063   13.4   0.1       0.16   12.2   0.1    1.6  1  ABC1           ABC1 family
      0.099   12.2   0.2       0.27   10.8   0.2    1.7  1  RIO1           RIO1 family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.7   0.1   5.1e-72   9.2e-69       4     264 .]     160     422 ..     157     422 .. 0.92

  Alignments for each domain:
  == domain 1  score: 231.7 bits;  conditional E-value: 5.1e-72
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH..............HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHH CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkke..............kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladl 88 
                  +++G Gs+GkV  a++ etg++vAvK++ + ++++ ++               +++rE +i+  l+hp+i+ +++vf+++++ y+++eyv+gg++ d+
  KHJ31972.1 160 GKTIGAGSMGKVKLARKLETGEEVAVKIVPRGSTDDVQHqskadreradhskeVRTAREAAIVTLLHHPFICSMKDVFRTTHHWYMLFEYVNGGQMLDY 258
                 689**************************9999888888888999999999776789**************************************9999 PP

                 HHHHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCB.SHHHHHHHHHHH CS
     Pkinase  89 lerkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeney.skkvDvWslGvi 186
                 +  +g l+e++a+k+ +qi+++l+y+H+++i+HrDlK eNiLi+++g++Ki+DFGl++ ++ + +l++f+g+ ++ APE+l++++y +++vD+Ws G++
  KHJ31972.1 259 IISHGRLKEKQARKFSRQIASALDYCHRNSIVHRDLKIENILISKTGDIKIIDFGLSNMFNPRDHLKTFCGSLYFAAPELLQAKQYtGPEVDIWSFGIV 357
                 999********************************************************************************99999*********** PP

                 HHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 187 lyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 ly l++gk pf  +++    ++++++              ++ +s + +e+k+l++++l  d ++R   +e+++h+++
  KHJ31972.1 358 LYVLVCGKVPFD-DQSMPALHAKIKK------------GVVDYPSWLTPECKHLISRMLVTDSRQRANLQEIMNHSWM 422
                 ************.3333333333333............3456677799*****************************7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.3   0.2   2.1e-41   3.7e-38       3     257 ..     159     418 ..     157     419 .. 0.87

  Alignments for each domain:
  == domain 1  score: 131.3 bits;  conditional E-value: 2.1e-41
                  EEEEEEEESSEEEEEEEEET...........TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHH CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkg...........ekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLl 89 
                  +gk++G+G+ GkV  ++  +           + ++++v+   K  +e+a+++++ +  +ea+i + l+hp i ++  v   +++ ++++eyv+gG++l
   KHJ31972.1 159 MGKTIGAGSMGKVKLARKLEtgeevavkivpRGSTDDVQHQSKADRERADHSKEVRTAREAAIVTLLHHPFICSMKDVFRTTHHWYMLFEYVNGGQML 256
                  689************99884344444444444444444444455555777777888899*************************************** PP

                  HHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEE.HHH CS
  Pkinase_Tyr  90 kfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkft.sks 186
                  +++ ++   +l+ k+  +f+ q+A++++y +++++vHrdl   N+L+s++  +ki DfGL++  + +d+    ++   ++ + apE l++k++t  + 
   KHJ31972.1 257 DYIISH--GRLKEKQARKFSRQIASALDYCHRNSIVHRDLKIENILISKTGDIKIIDFGLSNMFNPRDHL---KTFCGSLYFAAPELLQAKQYTgPEV 349
                  *****9..9*****************************************************99444444...3344678899*********994589 PP

                  HHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 187 DvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  D+WsfG++l+ +++ g+ p+ + +   + +k+k+g  ++ p+  ++e ++l+++ + +d ++R++++e+++
   KHJ31972.1 350 DIWSFGIVLYVLVC-GKVPFDDQSMPALHAKIKKG-VVDYPSWLTPECKHLISRMLVTDSRQRANLQEIMN 418
                  **********9998.************99999988.58999***************************986 PP

>> KA1  Kinase associated domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       3.1   5.5e+03      14      31 ..     875     892 ..     873     894 .. 0.79
   2 !   69.4   0.2   8.9e-23   1.6e-19       3      45 .]     997    1039 .]     996    1039 .] 0.98

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3.1
         KA1  14 elslygvrfkRlsGdtwq 31 
                  l+++ v++k ++G    
  KHJ31972.1 875 VLKQHNVKYKEIKGGFHC 892
                 688999****9*998655 PP

  == domain 2  score: 69.4 bits;  conditional E-value: 8.9e-23
         KA1    3 vkFEievcKlpelslygvrfkRlsGdtwqYkrlasqilseLkL 45  
                  + FEi+++K+p+lsl+g++fkRl G twqYk++a+qil+eL+L
  KHJ31972.1  997 LEFEIFIVKVPLLSLHGIQFKRLVGGTWQYKNMADQILRELRL 1039
                  68****************************************8 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0   2.8e-11   5.1e-08     119     256 ..     174     317 ..      85     329 .. 0.81
   2 ?   -3.9   3.5       2.8     5e+03       4     100 ..     684     776 ..     679     795 .. 0.68

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 2.8e-11
  Haspin_kinase 119 tke..kdkevvlKviplevledvtis.kelsl..kelkslklvkgtypglllllqdkvlkekpdfyse.qqlflvlllkdkGtdLeev....klks 204
                    +++  + +ev++K++p +  +dv+++ k  +     +k+++  + +   ++ll + ++   k d++++ ++ +++ +  ++G+ L+ +    +l +
     KHJ31972.1 174 ARKleTGEEVAVKIVPRGSTDDVQHQsKADREraDHSKEVRTAREA-AIVTLLHHPFICSMK-DVFRTtHHWYMLFEYVNGGQMLDYIishgRL-K 266
                    44444789****************9955443355899999999999.666666666666666.7666505556777788899998877654244.4 PP

  Haspin_kinase 205 wkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsRl 256
                     kqa +   qi++ L     +    HRdL+++niL+ k++ + +id+ ls +
     KHJ31972.1 267 EKQARKFSRQIASALDYCHRN-SIVHRDLKIENILISKTGDIKIIDFGLSNM 317
                    589************998655.889**********************99976 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 2.8
  Haspin_kinase   4 slsleslksrssqsslkhktshssLqkfsssssessssnkislPvkdqvs.rdkikkklrnsesllslnsqeevkdfdevilsqilelc.kikkil 97 
                    ++s++  + r+s++ l+  + +      ss+s++ ++   + +  ++++s +d +++   +ses+ s  ++ ++ df +  +++ l    + ++++
     KHJ31972.1 684 NISIRRTQDRNSEVHLSPTSIN------SSHSRHVTTFAPLTSTESNNISpKDLTRTPSLKSESIRSRENRLGASDFMQHFSKDNLPANgTKNHLV 773
                    6677777777777777744332......55666666666666666666664777788888888999988888889999988888887663333444 PP

  Haspin_kinase  98 nea 100
                    +e 
     KHJ31972.1 774 HED 776
                    444 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.59   1.1e+03      15      45 ..     158     188 ..     155     210 .. 0.84
   2 !   20.0   0.0     2e-07   0.00036     158     288 .]     282     410 ..     255     410 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.59
  Kinase-like  15 vrgellkkgdrsvvfevkdqetgeplavkvf 45 
                  v g+ ++ g  ++v +++  etge++avk+ 
   KHJ31972.1 158 VMGKTIGAGSMGKVKLARKLETGEEVAVKIV 188
                  678899999*******************975 PP

  == domain 2  score: 20.0 bits;  conditional E-value: 2e-07
  Kinase-like 158 anLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve..kgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPltla 253
                   + + + +vh +++ +n+l  + g +++ +f+       +  l + +    fa pEll +++            ++d W  G+v y + c k+P++ +
   KHJ31972.1 282 DYCHRNSIVHRDLKIENILISKTGDIKIIDFGLSNMFNPRDHLKTFCgsLYFAAPELLQAKQY--------TGPEVDIWSFGIVLYVLVCGKVPFDDQ 371
                  5668899***********************9877777777777777755779******99443........34689*******************987 PP

  Kinase-like 254 teeakeewkfklckkipe....kvkaLlkkfLqlsqedR 288
                     a  + + k ++  p     + k L+ ++L  ++++R
   KHJ31972.1 372 SMPALHAKIKKGVVDYPSwltpECKHLISRMLVTDSRQR 410
                  655555534455556655122245778888888887776 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.4   9.8e-08   0.00018      93     167 ..     244     313 ..     203     324 .. 0.86

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 9.8e-08
         Kdo  93 lllterlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDld 167
                  +l e ++g q L+ ++  + +l+e+  r+  ++++ +    hr  + H+dl + nil+ +++     i +iD+ 
  KHJ31972.1 244 YMLFEYVNGGQMLDYIIS-HGRLKEKQARKFSRQIASALDYCHRNSIVHRDLKIENILISKTG----DIKIIDFG 313
                 678899999999998888.577999*************************************9....99999995 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.74   1.3e+03      65     102 ..     240     281 ..     206     288 .. 0.73
   2 !   15.5   0.0   7.2e-06     0.013     147     196 ..     272     315 ..     254     320 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.74
                 EETTEEEEEEE----EE-SS......HHHHHHHHHHHHHHHHHH CS
         APH  65 eeigllfalieyvpgrsllr......klsaaqlpellealgefl 102
                 ++++  + l+eyv g ++l+      +l ++q++++ ++++++l
  KHJ31972.1 240 THHW--YMLFEYVNGGQMLDyiishgRLKEKQARKFSRQIASAL 281
                 5666..79************997766666666666666666665 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 7.2e-06
                 HHHHHHHHHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 147 eleeqvlaalaallpgelptvllHgDlhpgNllvdpddgrvtGviDfeda 196
                 ++ +q++ al+       + +++H+Dl+  N+l+ ++++    +iDf+++
  KHJ31972.1 272 KFSRQIASALDY----CHRNSIVHRDLKIENILISKTGDIK--IIDFGLS 315
                 444443333333....3369***************555554..****986 PP

>> WaaY  Lipopolysaccharide core biosynthesis protein (WaaY)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1     3e-05     0.053      93     178 ..     217     312 ..     205     323 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3e-05
        WaaY  93 rseglaal.ndfyllaerkilryvkvyimiieyiegielvdmpeiddevkak........ikqsieklhqlgmvsgdphrgnfivkk.devriidl 178
                 r++ + +l    ++ + + ++r ++ + m+ ey++g ++ d  + +  +k+k        i ++++  h+ ++v  d +  n++++k ++++iid+
  KHJ31972.1 217 REAAIVTLlHHPFICSMKDVFRTTHHWYMLFEYVNGGQMLDYIISHGRLKEKqarkfsrqIASALDYCHRNSIVHRDLKIENILISKtGDIKIIDF 312
                 55555444044455666779*********************987776666542222222267778889**************98876278****97 PP

>> ABC1  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   8.7e-05      0.16      17      44 ..     161     189 ..     158     218 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 8.7e-05
        ABC1  17 ePiAaASiaqVhrAklk.sgeeVavKvqr 44 
                 ++i+a+S+++V  A+   +geeVavK+  
  KHJ31972.1 161 KTIGAGSMGKVKLARKLeTGEEVAVKIVP 189
                 689***********86559*******964 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   0.00015      0.27      83     150 ..     245     313 ..     172     322 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00015
                 EEEE--EETTEEGGBHHHCG.-HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE--GT CS
        RIO1  83 lvmefigedgvaapklkdve.eeeeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviIDvs 150
                 ++ e+++  ++  + +++ + +e++a++  +++ ++     +++ +vH DL   N+l+++  ++ iID++
  KHJ31972.1 245 MLFEYVNGGQMLDYIISHGRlKEKQARKFSRQIASA-LDYCHRNSIVHRDLKIENILISKTgDIKIIDFG 313
                 556777755555555666664466777777777775.5555699**************9998******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1039 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       748  (0.0417201); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.76u 0.31s 00:00:01.07 Elapsed: 00:00:00.45
# Mc/sec: 6944.63
//
Query:       KHJ31973.1  [L=515]
Description: putative nuclear localization protein npl6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-52  178.0   0.1    1.8e-52  177.4   0.1    1.3  1  CRC_subunit      Chromatin remodelling complex Rsc7/Swp82 sub
  ------ inclusion threshold ------
        9.1    6.9   9.4         18    5.9   9.4    1.4  1  FoP_duplication  C-terminal duplication domain of Friend of P


Domain annotation for each model (and alignments):
>> CRC_subunit  Chromatin remodelling complex Rsc7/Swp82 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.4   0.1     2e-56   1.8e-52       2     133 ..     152     281 ..     151     283 .. 0.98

  Alignments for each domain:
  == domain 1  score: 177.4 bits;  conditional E-value: 2e-56
  CRC_subunit   2 ddeykltkedpegekkidknGkLlggreyrvktFtleeregkklyvLstdlarllgfrdsylffkknpqllkllatqeekedLiergllpsslksrqi 99 
                  +de++l+ ed+egekk+dk G+L++greyr++tFt+ +r g++ly+Lst++ar++gfrdsylff+k+++l+k++++++ek+dLi+r+l+p+s+k+r+i
   KHJ31973.1 152 NDEVELP-EDSEGEKKVDKFGHLKDGREYRCRTFTVLGR-GQRLYMLSTEPARCVGFRDSYLFFTKHKRLYKIIIDEDEKRDLIDRELIPHSYKGRAI 247
                  7999***.*******************************.********************************************************** PP

  CRC_subunit 100 klvtarsvFlefGariivkGkrvvDDYyeekake 133
                   +vtarsvF+efGa+iiv+G+r++DDY  ++ak 
   KHJ31973.1 248 GIVTARSVFREFGAQIIVGGRRIIDDYEVARAKV 281
                  ***************************9999876 PP

>> FoP_duplication  C-terminal duplication domain of Friend of PRMT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   9.4     0.002        18      11      50 ..     102     144 ..      95     145 .. 0.50

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.002
  FoP_duplication  11 gggrggrrgrgrggrggrggrgrgrggrgg...rkkkkpltke 50 
                      +++ +g  g+grg+ +g+ grg+gr  r+g     +++p++ke
       KHJ31973.1 102 SAQEPGTAGKGRGRGRGGFGRGGGRWARRGgpsHVTQQPVDKE 144
                      3444444455555555555555555555552333666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       669  (0.0373138); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 3811.09
//
Query:       KHJ31974.1  [L=1011]
Description: putative ddhd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-60  204.3   0.1    2.6e-60  204.3   0.1    3.2  2  DDHD      DDHD domain


Domain annotation for each model (and alignments):
>> DDHD  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -11.8  16.1         1   1.8e+04     102     157 ..     239     293 ..      86     479 .. 0.72
   2 !  204.3   0.1   1.5e-64   2.6e-60       1     223 []     684     993 ..     684     993 .. 0.82

  Alignments for each domain:
  == domain 1  score: -11.8 bits;  conditional E-value: 1
        DDHD 102 kqkvsglvsslsallnrsle..laeeesaslaessksherasesskasqeskaaesst 157
                 +qkvs++ s+l++   +sl+   +++++as+ ++ k+ ++++++s+ s+e k a +++
  KHJ31974.1 239 NQKVSEISSNLTK---SSLKsgESQNSTASTMSNRKRLSSSETISNLSEEPKVAMNES 293
                 3333333333321...111100111111111111111112222222222222222211 PP

  == domain 2  score: 204.3 bits;  conditional E-value: 1.5e-64
        DDHD   1 ldFevedfFllGSPlGlflalrglera....................................ktvkpald...vaqlkrpacqqlyNiFhpaDPvAyR 60 
                 ++F+vedf++ GSP+Glf++l+g++++                                    +  k ++d   + ++++p++ +l+NiFhp+DP+AyR
  KHJ31974.1 684 FEFDVEDFYCYGSPIGLFQMLKGRNILarksrkeispgepaidsenlqdsffssssssqlpsnQ--KMSSDrelPPTVSSPKVGRLFNIFHPSDPIAYR 780
                 89***********************889999*************************99998642..333334689999********************* PP

        DDHD  61 lEPLlepkfsklkPvsiprykrrkllhlelkesltsigaalkqkvsglvsslsa.....llnrslelaeeesaslaessksherasesskasqeskaae 154
                 lEPL++p +s++kP+++p +kr+       ++s++ iga+++q+vsg+++sls+     ++nrsl+l++++ a++++s  s+++a+++  ++++s++ +
  KHJ31974.1 781 LEPLISPVMSSVKPQNLPFTKRSI------SSSMSGIGAKVGQSVSGILTSLSSglassIFNRSLGLTTGDIARMEASGPSKQSAQAIGMSKTSSATLD 873
                 **********************54......89*********************4555679***************999999998777777766666655 PP

        DDHD 155 sstasssaksskaee...................................kvelek....................vralnwwgRiDYaLqegaleaey 198
                  s+ ++++ ssk+++                                   +                         vraln++gR+DY+Lqe  l+ ++
  KHJ31974.1 874 GSALKKEEGSSKKRRpddsstttdqegigsgsstnffdenietlysgfqkS----YrvdqstaeeklrrikreeakVRALNSNGRVDYSLQETFLDYNP 968
                 555555554444444666655555566666666666666555555555550....055555555666667777777*********************** PP

        DDHD 199 lsavasHasYWeseDvalFllrqll 223
                 ++++asH+sYW++eDv++F+++qll
  KHJ31974.1 969 MNTIASHMSYWADEDVSHFMMSQLL 993
                 ***********************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1011 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       888  (0.0495287); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.26s 00:00:00.95 Elapsed: 00:00:00.39
# Mc/sec: 7728.23
//
Query:       KHJ31975.1  [L=938]
Description: putative atp-dependent dna helicase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-59  201.1   0.7    7.6e-59  199.8   0.0    2.0  3  UvrD_C           UvrD-like helicase C-terminal domain
    6.8e-57  193.4   1.9    6.8e-57  193.4   1.9    3.1  2  UvrD-helicase    UvrD/REP helicase N-terminal domain
    2.3e-29  102.6   0.0      5e-29  101.5   0.0    1.6  1  AAA_19           AAA domain
    1.4e-13   50.4   0.0    2.6e-13   49.5   0.0    1.5  1  UvrD_C_2         UvrD-like helicase C-terminal domain
      7e-06   25.9   0.0     0.0035   17.1   0.0    2.3  2  AAA_30           AAA domain
    2.3e-05   24.3   2.5       0.35   10.6   0.0    3.5  4  Viral_helicase1  Viral (Superfamily 1) RNA helicase
      0.001   18.8   0.0     0.0044   16.7   0.0    2.0  2  AAA_12           AAA domain
  ------ inclusion threshold ------
      0.013   15.3   0.7      0.013   15.3   0.7    3.1  2  AAA_11           AAA domain
      0.061   13.2   0.0       0.15   11.9   0.0    1.6  1  DFF-C            DNA Fragmentation factor 45kDa, C terminal d


Domain annotation for each model (and alignments):
>> UvrD_C  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       1.2   2.3e+03     131     186 ..     123     180 ..     112     259 .. 0.54
   2 !  199.8   0.0   3.8e-62   7.6e-59       1     346 [.     274     635 ..     274     638 .. 0.86
   3 ?   -3.1   0.1       1.9   3.8e+03      46     110 ..     706     767 ..     690     825 .. 0.60

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.2
                 xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx RF
      UvrD_C 131 alkrilkrlvlgigkatve.riseelkklglsltDfikedtle.ygeeFieliralee 186
                 ++kri++r  l+ +++tv+ ris    + g + ++ +k++ +    +eF    r++ee
  KHJ31975.1 123 IIKRIINRHELKCDPKTVRnRISGTKARGGNRDQNELKKSPISiESQEFFLCYREYEE 180
                 4566666666666666665133333333333333333333222133444444444444 PP

  == domain 2  score: 199.8 bits;  conditional E-value: 3.8e-62
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C   1 ivLekNyRStksLlkaankflenilnrralekek...ktvekgekivvleaeteeeEaekiaatikall...ekneklediavLvRsnkdadkiskaLk 93 
                 i Le NyRS+  ++ +a +++++  +r++    k   ++++ g + v+++  +  +Eae+i  +ik+++   +   +l d+++L Rs + +++i+++L+
  KHJ31975.1 274 IILEDNYRSSGAIISMALNIIKQDSDRIT----KsliSKNTFGTRPVIRKLSDAHKEAEWISLEIKRIVgmtGGLLDLGDVSILLRSAALSRLIENSLR 368
                 78*******************88888832....235689999***************************98888899********************** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C  94 kegipfnvvdeekfFkreeikdilaylkllankqdkialkrilkrlvlgigkatveriseelkklglsltDfikedtleygeeFieliraleeknlell 192
                 + g+ +++v++ +f++r e+k +l yl+ ++ ++++ al+ il++++++ig++t++r++ee  ++ + l  ++ +   + + + i+l +++ ++ l+ +
  KHJ31975.1 369 RTGLAYRMVGGVRFYDRFEVKILLDYLRAINKPDNDDALSNILNGPPRKIGDTTIRRLMEEATNRKITLWSLLLMIVKKKIPPNIKLSTQVMQGILC-V 466
                 *********************************************************************************************9986.3 PP

                 xxxxxxxxxxx..xxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxxx RF
      UvrD_C 193 lkkiektaeer..qalvskyadlfkelaek..laelkekseskrkkee...klenlreLysllkelekkeeeeeveek................lneil 268
                  + ie  +++   +    +  dl k++ ++  ++e+ +  +++    +   +++n++eL++++ e++++ +  ++e++                l+++l
  KHJ31975.1 467 CDLIETSRDNIlnHDNPISLLDLMKRILKHtkFEEWLQIHHND----AlklRWSNVEELMTQVMEFQEN-NVHGYEDEslplidgvqqkgnlnvLAKFL 560
                 3435555544322111222333334433320022222222222....24579****************4.444666668******************** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C 269 eiatLseseleeskkkekipiiTiHqAKGlEFdvVflagleegtfPsyrskkekrleEEkRlfYVaiTRAkkrLfisy 346
                  + +Ls++++++    ++i+i+TiH+AKGlE++vVf+  + +g +P++rs ++   +EE+Rl+YVa+TRAk  L++sy
  KHJ31975.1 561 ANVALSSGTENNAGGISQITISTIHAAKGLEWPVVFIPAVYQGSIPHSRSDDS---KEERRLLYVAMTRAKVLLYLSY 635
                 **********999999******************************9997776...9********************9 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 1.9
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C  46 leaeteeeEaekiaatikallekneklediavLvRsnkdadkiskaLkkegipfnvvdeekfFkr 110
                  + e++++E+e    t   ++   + + d+  L R + ++d ++++ +k+  +f++ d    Fk+
  KHJ31975.1 706 ANVENHQDETEMLSHTTDGNK---DFQMDYQSLKRRHTRSDGMENHHRKNLNSFIKADHIPSFKT 767
                 455555555555555554444...44444444555555555555555444444444444444444 PP

>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.4   1.9   3.4e-60   6.8e-57       1     314 [.      10     268 ..      10     269 .. 0.90
   2 ?   -0.9   0.9      0.45     9e+02     147     197 ..     742     821 ..     665     851 .. 0.48

  Alignments for each domain:
  == domain 1  score: 193.4 bits;  conditional E-value: 3.4e-60
                    SSHHHHHHHHS.-SSEEEEEE-TTSSHHHHHHHHHHHHHHTSSSTGGGEEEEESSHHHHHHHHHHHHHHHHHCCHHCTT-HHHHHHHHHCTTSEEE CS
  UvrD-helicase   1 lnpeqreaias.lggpilveAsAGsGKTfvlaerilrlikeeeiepdrilvvTFTnkAaeElkeRieealkkaeqessdderlrlalqnlseanis 95 
                    ln++q++a++s ++g++ ++A++GsGKT++l++r + l+ ++ ++p +i+v TFT k a+E+keRi ++++++               n s++  +
     KHJ31975.1  10 LNESQKSAVTSnPHGQLSILAGPGSGKTHTLVARTAWLLSNG-TKPWDIIVTTFTVKTAREIKERIGKLVGES---------------NSSRLILG 89 
                    699***************************************.****************************97...............68****** PP

                    EHHHHHHHHHHHHHGGTTSHTTTEEECHHHHHHCCHHHHHHHHHSCHSHTTTTHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHCHHHHHHHHHHH CS
  UvrD-helicase  96 TlHsfcqkilkkeanrigldpnfrildeedeedlkqqellkelleksaddslnldkkkleklikelsksrnikkeelslskskaeelrelvskake 191
                    T+Hs+++++l k+ + i+l+++f+i+d+ d      ++++k++++   + +l+ d k ++++                        ++ +  +  +
     KHJ31975.1  90 TFHSIARRYLIKYGYLINLKNEFDIADSAD-----CLAIIKRIIN---RHELKCDPKTVRNR------------------------ISGTKARGGN 153
                    ******************************.....9********8...66688888888844........................4444444444 PP

                    TTCCTTHHCHSSTSCSHHHHHHHHHHHHHHHHHHHHTCEEHHHHHHHHHHHHHHCHHHHHHHHHHSSEEEESSGGG-BHHHHHHHHHHHTTTTTEE CS
  UvrD-helicase 192 kqlspkelkkafekasdlqkkiaeflkeyqeqkkeenalDfsdllhallelleeneelaealrerykeiliDEyQDTnkiQyrilkllasgheelf 287
                    ++++++++ +     s +++++  +++ey+e ++++n+lD++dll+++++ll+e++  +++    ++ +liDE+QDTn +Qy++++l as +++++
     KHJ31975.1 154 RDQNELKKSP----ISIESQEFFLCYREYEEALNRSNLLDYDDLLLNCVKLLREHPICVAN----IEAVLIDEFQDTNTVQYELMRLFASCKQQVT 241
                    4444444444....4566677899******************************9987665....578**************************** PP

                    EEE-GGG--GGGGTB-THHHHHHHHHS CS
  UvrD-helicase 288 mvGDpkQsIYgFRgAdielflkkkkdf 314
                    +vGDp+QsIY+FR A++++++++  ++
     KHJ31975.1 242 IVGDPDQSIYSFRAAELQNYQRFHYQY 268
                    *********************998776 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.45
                    TTHHHHHHHHHHHHHHCCCCCH.............................HHHCCCHHHHHCHHHHHHHHHHHTTCCTT CS
  UvrD-helicase 147 lnldkkkleklikelsksrnik.............................keelslskskaeelrelvskakekqlspk 197
                     +  +++ +k+   ++k  +i+                               ++++ ++  ++l+++ +k+ + + ++ 
     KHJ31975.1 742 SDGMENHHRKNLNSFIKADHIPsfktsfisagshletmlgkkldklddkkmQSTKVGLQKDVIDLSNHKTKLAKAEHQQR 821
                    22222333333344444444446666666666666665554444433333322223333333333333333333333332 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.5   0.0   2.5e-32     5e-29       1     146 []      14     254 ..      14     254 .. 0.95

  Alignments for each domain:
  == domain 1  score: 101.5 bits;  conditional E-value: 2.5e-32
      AAA_19   1 qreavealkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgae.......atTiHrlal............... 77 
                 q++av+  +++ l ++aGpG+GKT++l+++ a+l+++g+ kp +i++ +ft + a+e++er+ +l +e         T+H++a                
  KHJ31975.1  14 QKSAVTSNPHGQLSILAGPGSGKTHTLVARTAWLLSNGT-KPWDIIVTTFTVKTAREIKERIGKLVGEsnssrliLGTFHSIARrylikygylinlkne 111
                 8899999999***************************95.68********************9999989*****999*****99*************** PP

      AAA_19  78 ............................................................................ldfddlltealelleeaeeekkl 100
                                                                                             ld+ddll + ++ll+e  +   +
  KHJ31975.1 112 fdiadsadclaiikriinrhelkcdpktvrnrisgtkarggnrdqnelkkspisiesqefflcyreyeealnrsnlLDYDDLLLNCVKLLRE--HPICV 208
                 ***********************************************************************************99**99885..33344 PP

      AAA_19 101 qeee.llivDEfqdvdelqyrLlkallgekkklllvGDpdQliyvfr 146
                  ++  ++++DEfqd++ +qy+L++  +  k+++++vGDpdQ+iy+fr
  KHJ31975.1 209 -ANIeAVLIDEFQDTNTVQYELMRLFASCKQQVTIVGDPDQSIYSFR 254
                 .4445**********************99999*************97 PP

>> UvrD_C_2  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.5   0.0   1.3e-16   2.6e-13       2      51 ..     579     633 ..     578     634 .. 0.89

  Alignments for each domain:
  == domain 1  score: 49.5 bits;  conditional E-value: 1.3e-16
    UvrD_C_2   2 ayaltihkaQGsefpaVivfdpdlaaarmgel.....rrrlLYtavTRAreklil 51 
                 ++++tih a+G+e+p+V++ +++  + ++++       rrlLY+a+TRA+  l+l
  KHJ31975.1 579 ITISTIHAAKGLEWPVVFIPAVYQGSIPHSRSddskeERRLLYVAMTRAKVLLYL 633
                 5799***************999977777766677999*************99998 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   1.8e-06    0.0035       1      67 [.       9      75 ..       9     118 .. 0.83
   2 !    6.5   0.0    0.0032       6.3      90     128 ..     212     249 ..     186     307 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.8e-06
      AAA_30  1 elnaeQaaavealltsgdrvavltGpAGtGKttalkalreaweaag...grviglAptgkaAkvLaeelg 67
                +ln++Q++av+   ++++    + +++G+GKt++l a ++ + ++g    ++i+ + t k A++++e +g
  KHJ31975.1  9 TLNESQKSAVT---SNPHGQLSILAGPGSGKTHTLVARTAWLLSNGtkpWDIIVTTFTVKTAREIKERIG 75
                68999***995...4444456667779********988887777788999****************9998 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0032
      AAA_30  90 tllivDEagmvdtkqlaallkaaekagakvilvGDerQl 128
                 + +++DE   ++t q + l++  ++ + +v +vGD++Q 
  KHJ31975.1 212 EAVLIDEFQDTNTVQYE-LMRLFASCKQQVTIVGDPDQS 249
                 7899***9999988865.6666666688*********95 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.12   2.4e+02       3      17 ..      28      42 ..      26      74 .. 0.85
   2 !   10.1   0.1   0.00025      0.49      56     113 ..     204     262 ..     174     284 .. 0.79
   3 !   10.6   0.0   0.00018      0.35     183     230 ..     570     631 ..     517     634 .. 0.69
   4 ?   -3.3   0.2         3   5.9e+03     113     183 ..     748     821 ..     737     840 .. 0.48

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.12
  Viral_helicase1  3 vhGvpGcGKStlirk 17
                     + + pG+GK++ ++ 
       KHJ31975.1 28 ILAGPGSGKTHTLVA 42
                     5678******98865 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00025
  Viral_helicase1  56 alvkstkgkililDEylllhaGyill.laalskaklvilfGDplQipfhsrnasfllah 113
                      + ++  + + +++DE++  ++ + +l  +  s+ ++v ++GDp Q+ ++ r+a+ ++ +
       KHJ31975.1 204 HPICVANIEAVLIDEFQDTNTVQYELmRLFASCKQQVTIVGDPDQSIYSFRAAELQNYQ 262
                      55555557889********9988888777789999**************9998666554 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00018
  Viral_helicase1 183 r.........evttvhevqGltfdkVtlvllketdlelis.......esrenllvAlTRhrksl 230
                      +          ++t h + Gl++++V +    + +  +         e+r  l+vA+TR++  l
       KHJ31975.1 570 EnnaggisqiTISTIHAAKGLEWPVVFIPAVYQGS--IPHsrsddskEERRLLYVAMTRAKVLL 631
                      3444444555699*************996432211..1112234444679**********9766 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 3
  Viral_helicase1 113 hlpsslshrvgrrttyllpsdvaeilsak....vgteveversgelkvetepkgqe..kvlvyltftqalkealgvr 183
                      h+ ++l ++ +      +ps+ + + sa     ++ ++++++ +  k  ++ +g +   + +  + t+ +k+++++r
       KHJ31975.1 748 HHRKNLNSFIKAD---HIPSFKTSFISAGshleTMLGKKLDKLDDKKMQSTKVGLQkdVIDLSNHKTKLAKAEHQQR 821
                      4444443333333...3555555555555433433333333322223333333332234445556666666666666 PP

>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.96   1.9e+03       8      34 ..     263     290 ..     259     323 .. 0.82
   2 !   16.7   0.0   2.2e-06    0.0044      95     193 ..     525     632 ..     471     634 .. 0.68

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.96
      AAA_12   8 rllkke.kekvvlLdtqYRmhpeIsrfp 34 
                 r++ ++ k+ +++L+ +YR+  +I +++
  KHJ31975.1 263 RFHYQYpKSTTIILEDNYRSSGAIISMA 290
                 5555555678899*******99998876 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 2.2e-06
      AAA_12  95 vvklvekllkkgsee.........erkkigvitpYraqvellkkklkekeeeksekeievntvdgfQGrekdviilslVRsn...ekkeig.flkderr 180
                 v+++ e+ ++ +++e         ++ ++ v++ + a v l + + ++ +     ++i+++t+ +  G e+ v+++ +V +    + ++     +++r 
  KHJ31975.1 525 VMEFQENNVHGYEDEslplidgvqQKGNLNVLAKFLANVALSSGTENN-AGG--ISQITISTIHAAKGLEWPVVFIPAVYQGsipH-SRSDdSKEERRL 619
                 455555555555555555555555556677777777777654444333.322..335***********************976742.333314566666 PP

      AAA_12 181 lNValTRAkskli 193
                 l Va+TRAk  l+
  KHJ31975.1 620 LYVAMTRAKVLLY 632
                 89*******8876 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   0.7   6.5e-06     0.013       1      73 [.       9      73 ..       9     248 .. 0.64
   2 ?   -0.2   1.2      0.34   6.8e+02     139     179 ..     752     815 ..     666     856 .. 0.48

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 6.5e-06
      AAA_11  1 klndsqreaiksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCapSNaAvDeller 73
                +ln+sq+ a++s    +  +++ GP G+gKT+t+v+  + lls+      ++++  i v++ + +   e+ er
  KHJ31975.1  9 TLNESQKSAVTSNPHGQL-SILAGP-GSGKTHTLVARTAWLLSN------GTKPWDIIVTTFTVKTAREIKER 73
                59********99888885.999999.*********998888643......33444444444444444444444 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.34
      AAA_11 139 elrafeeeeek...........................eklkkskekskskleqerrklkkerkelsk 179
                  l++f     k                           +  +k+++ +k  l+++  +l++ +++l k
  KHJ31975.1 752 NLNSFI----KadhipsfktsfisagshletmlgkkldKLDDKKMQSTKVGLQKDVIDLSNHKTKLAK 815
                 222222....1333455555555566666665555554222222222333333333333333333222 PP

>> DFF-C  DNA Fragmentation factor 45kDa, C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   7.6e-05      0.15      94     164 ..     390     462 ..     381     464 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.6e-05
       DFF-C  94 lLqLYLkavekEgsilskqseseaalkeevdvvdt..ksaevsskvalssriltvLkektsPelsLssqdLel 164
                 +L  YL+a++k ++  + ++  +   ++  d++    +++ ++ k++l s +l+++k+k  P+++Ls+q ++ 
  KHJ31975.1 390 ILLDYLRAINKPDNDDALSNILNGPPRKIGDTTIRrlMEEATNRKITLWSLLLMIVKKKIPPNIKLSTQVMQG 462
                 56669999999877655555545445554454443447788888************************98885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (938 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.46
# Mc/sec: 6126.08
//
Query:       KHJ31976.1  [L=279]
Description: putative type 2a phosphatase activator tip41 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.8e-69  231.6   0.3    4.7e-69  231.3   0.3    1.1  1  TIP41           TIP41-like family
  ------ inclusion threshold ------
      0.086   13.6   0.1         24    5.7   0.0    2.3  2  CarD_CdnL_TRCF  CarD-like/TRCF domain


Domain annotation for each model (and alignments):
>> TIP41  TIP41-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.3   0.3   5.3e-73   4.7e-69       1     171 [.      58     238 ..      58     239 .. 0.97

  Alignments for each domain:
  == domain 1  score: 231.3 bits;  conditional E-value: 5.3e-73
       TIP41   1 mvFgnnlleleheksgvklefnaldaLkavkkeeee..kvayakewkksrkkk....kevvkpyDwtytteYkGtleeklkveetee....eiplekLk 89 
                 m+Fg+n+l++eh +sg++l+fna+daL++v k++e+  kv+y++ew+ksr+k+    k++vkpyDw+ytt+YkG++ + ++++++e+     ip+e+Lk
  KHJ31976.1  58 MIFGDNFLSIEHLASGWHLNFNAFDALDRVCKTDEAmlKVSYSQEWSKSREKThdtiKQIVKPYDWSYTTDYKGSIIKGMDFHAQEDgsldLIPVEMLK 156
                 9********************************7779*************99988888999***************9999999999888989******* PP

       TIP41  90 rkdpilfydevvLyedeLadnGisllsvkvrvmpeclllLlRfflRvDnvlvrvrdtrvyvefeseevlrevkekeakyeev 171
                 r+dpilfy+evvLye+eL+dnGisll++kvrvmp+++llL+R+++RvDnv++r+rdtr+yv+f++ +v+r++ eke+k++++
  KHJ31976.1 157 RPDPILFYEEVVLYESELDDNGISLLNCKVRVMPDRMLLLCRLYMRVDNVIIRIRDTRIYVDFDTGKVIRDYVEKEEKFAKL 238
                 *******************************************************************************997 PP

>> CarD_CdnL_TRCF  CarD-like/TRCF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0029        26      50      90 ..      79     119 ..      63     121 .. 0.83
   2 ?    5.7   0.0    0.0027        24      33      70 ..     206     239 ..     186     266 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0029
  CarD_CdnL_TRCF  50 dqldlirkyiskeepkldklggkrwektkekakkgvkeeaa 90 
                     +  d + ++++++e+ l+   +++w+k +ek +  +k++++
      KHJ31976.1  79 NAFDALDRVCKTDEAMLKVSYSQEWSKSREKTHDTIKQIVK 119
                     556778888877777777777**********9999999875 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0027
  CarD_CdnL_TRCF  33 lvleyadkkgdklyvPvdqldlirkyiskeepkldklg 70 
                     +++++ d   +++yv  d  ++ir y++ke  k  kl 
      KHJ31976.1 206 VIIRIRD---TRIYVDFDTGKVIRDYVEKE-EKFAKLK 239
                     5666666...89***************998.4555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2018.30
//
Query:       KHJ31977.1  [L=762]
Description: putative aaa family atpase 60s ribosome export protein rix7 60s ribosome export protein rix7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-85  284.6   0.0    1.1e-45  155.3   0.0    2.6  2  AAA              ATPase family associated with various cellul
    3.1e-19   68.5   0.1    2.6e-08   33.5   0.0    2.7  2  AAA_lid_3        AAA+ lid domain
      8e-15   54.9   0.0    6.6e-07   29.2   0.0    2.8  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    9.7e-11   42.3   1.7     0.0014   19.0   0.0    4.1  4  AAA_16           AAA ATPase domain
    2.4e-10   40.6   0.3    0.00046   20.2   0.0    3.9  2  AAA_5            AAA domain (dynein-related subfamily)
    1.7e-08   34.8   0.0      0.011   16.0   0.0    2.9  2  AAA_33           AAA domain
    1.7e-08   34.6   0.0     0.0024   17.9   0.0    2.8  2  AAA_14           AAA domain
    1.7e-08   34.8   2.0      0.016   15.5   0.0    4.7  3  AAA_22           AAA domain
    1.1e-07   32.1   0.0     0.0031   17.7   0.0    3.1  2  AAA_2            AAA domain (Cdc48 subfamily)
    3.5e-07   29.8   0.2      0.027   13.9   0.0    2.6  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    3.8e-07   30.4   0.0      0.053   13.9   0.0    3.2  2  RNA_helicase     RNA helicase
    4.1e-07   30.1   0.0      0.013   15.4   0.0    3.1  3  Rad17            Rad17 P-loop domain
    9.1e-07   28.4   0.2      0.046   12.9   0.1    2.5  2  TIP49            TIP49 P-loop domain
      3e-06   27.1   0.0      0.043   13.5   0.0    2.6  2  IstB_IS21        IstB-like ATP binding protein
    4.7e-06   26.0   0.1      0.041   13.2   0.0    2.7  2  Zeta_toxin       Zeta toxin
    8.9e-06   25.7   0.0       0.13   12.2   0.0    3.3  3  NACHT            NACHT domain
    1.3e-05   25.7   0.2       0.19   12.2   0.0    3.2  3  ABC_tran         ABC transporter
    1.5e-05   25.3   0.0       0.29   11.4   0.0    2.7  2  AAA_28           AAA domain
    1.5e-05   25.6   0.6       0.14   12.7   0.0    3.3  2  AAA_18           AAA domain
    1.6e-05   24.6   0.4        3.6    7.1   0.0    4.1  4  AAA_25           AAA domain
    1.9e-05   24.5   0.0       0.27   11.1   0.0    2.6  2  AAA_3            ATPase family associated with various cellul
    5.7e-05   23.1   0.0        0.4   10.7   0.0    2.4  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
    6.4e-05   22.5   0.0       0.42   10.1   0.0    2.8  2  AAA_7            P-loop containing dynein motor region
    7.6e-05   22.9   0.0       0.11   12.6   0.0    2.6  2  Cytidylate_kin2  Cytidylate kinase-like family
    0.00016   21.5   0.0        0.1   12.3   0.0    2.8  2  Sigma54_activat  Sigma-54 interaction domain
    0.00021   20.7   3.4       0.29   10.4   0.0    3.5  3  ATPase           KaiC
    0.00042   20.2   4.4        1.2    8.9   0.0    3.3  3  AAA_11           AAA domain
    0.00066   19.5   0.0       0.51   10.0   0.0    2.5  2  Viral_helicase1  Viral (Superfamily 1) RNA helicase
    0.00087   19.4   0.0       0.78    9.9   0.0    2.7  2  Sigma54_activ_2  Sigma-54 interaction domain
    0.00094   18.4   0.0      0.011   14.9   0.0    2.3  2  DUF815           Protein of unknown function (DUF815)
      0.001   19.5   0.3        3.2    8.2   0.0    3.1  3  AAA_17           AAA domain
     0.0011   18.7   0.0       0.68    9.6   0.0    2.8  2  AAA_24           AAA domain
     0.0012   18.1   0.8       0.81    8.8   0.0    3.1  3  NB-ARC           NB-ARC domain
     0.0017   17.8   0.1        0.9    8.9   0.0    3.3  3  TniB             Bacterial TniB protein
     0.0021   18.4   0.0       0.91    9.8   0.0    2.6  2  AAA_19           AAA domain
     0.0047   16.4   0.0        2.1    7.8   0.0    2.6  2  PhoH             PhoH-like protein
     0.0056   16.6   0.7        1.5    8.7   0.0    3.5  4  ATPase_2         ATPase domain predominantly from Archaea
     0.0059   15.5   0.0       0.59    9.0   0.0    2.6  2  AFG1_ATPase      AFG1-like ATPase
  ------ inclusion threshold ------
      0.011   15.8   0.7        6.7    6.8   0.0    3.1  2  SKI              Shikimate kinase
      0.015   14.4   0.0        1.6    7.8   0.0    2.4  2  Parvo_NS1        Parvovirus non-structural protein NS1
       0.13   12.0   0.1         21    4.8   0.0    2.5  2  AAA_30           AAA domain
        1.2    9.1   4.8        6.5    6.6   0.0    3.5  3  NTPase_1         NTPase


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.7   0.0   1.7e-39   7.3e-37       1     131 [.     219     352 ..     219     353 .. 0.96
   2 !  155.3   0.0   2.5e-48   1.1e-45       1     131 [.     524     653 ..     524     654 .. 0.97

  Alignments for each domain:
  == domain 1  score: 126.7 bits;  conditional E-value: 1.7e-39
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 vll+GppG+GKT++a+  a e+gv+++ +s+++l+  + gesekkire+f+ea + a p+ +fiDEi+ ++++r+++++e e+r+v+q+lt +d+ +  
  KHJ31977.1 219 VLLHGPPGCGKTMIANIFAAEIGVSYIPLSAPSLVAGMSGESEKKIREIFDEAVKVA-PCLVFIDEIEVIMGKRETAQREMEKRIVAQMLTCMDEISLI 316
                 79******************************************************9.*************************************8765 PP

                 ...SSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA 100 ...eskvivigatnrpdkldpallr.gRfdrkieie 131
                     ++v++++atnrpd ldpal+r gRf+r+i+++
  KHJ31977.1 317 ktnGKPVMIMAATNRPDCLDPALRRaGRFNREINLG 352
                 555778**************************9875 PP

  == domain 2  score: 155.3 bits;  conditional E-value: 2.5e-48
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 vll+GppG+GKTllakava+e++++f++i+g+ell+kyvgese+ +r++f++a+++  p+ilf+DE+dal+++r++s se + +vvn+Llteldg++++
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANESKANFISIKGPELLNKYVGESERAVRQVFERARSSI-PCILFFDELDALVPKREDSLSEASCKVVNTLLTELDGLSNR 621
                 79******************************************************9.****************99**********************8 PP

                 SSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA 100 eskvivigatnrpdkldpallr.gRfdrkieie 131
                 ++ + vi+atnrpd++dpa+lr gR+   ++++
  KHJ31977.1 622 TG-IYVIAATNRPDMIDPAMLRpGRLGTSVFVD 653
                 76.***********************9998876 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0   1.9e-10   7.9e-08       1      36 [.     375     410 ..     375     422 .. 0.94
   2 !   33.5   0.0     6e-11   2.6e-08       4      38 ..     683     719 ..     681     724 .. 0.91

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 1.9e-10
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgik 36 
                 d+d++ LA++T+G++GADl  ++  A+  A++r++ 
  KHJ31977.1 375 DFDYESLAKLTPGFVGADLNDVVSVAGTDAIKRVMN 410
                 89*******************************986 PP

  == domain 2  score: 33.5 bits;  conditional E-value: 6e-11
   AAA_lid_3   4 lkeLAe..rTeGySGADlaalcreAallAlrrgikei 38 
                 l+++A+  r+ G+SGADl++l + Aa++Al+r++  +
  KHJ31977.1 683 LENVARdiRCTGFSGADLSNLHQTAAIAALKRNMIVV 719
                 67889999*************************9755 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   1.6e-09   6.6e-07      35     151 ..     218     341 ..     212     351 .. 0.80
   2 !   22.8   0.0   1.4e-07     6e-05      35     104 ..     523     600 ..     484     636 .. 0.75

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 1.6e-09
      RuvB_N  35 hvllyGpPGlGkttlakiiakelgvklkitsgPvl......ekagdlaalltnleekd..vlfideihrlsraveevlysamedfrldivigkGpsars 125
                  vll+GpPG Gkt +a+i a+e+gv+    s+P l      e ++ +  ++ +  +    ++fidei  +  +  e     me   +  ++        
  KHJ31977.1 218 GVLLHGPPGCGKTMIANIFAAEIGVSYIPLSAPSLvagmsgESEKKIREIFDEAVKVApcLVFIDEIEVIMGK-RETAQREMEKRIVAQMLTCMDEISL 315
                 59*******************************98444444455667777765443322378*****988766.5677889999999999999999999 PP

      RuvB_N 126 ikldlpkftlvgattragllssPlrd 151
                 ik + ++  +++at r   l   lr 
  KHJ31977.1 316 IKTNGKPVMIMAATNRPDCLDPALRR 341
                 99999999999999999999988874 PP

  == domain 2  score: 22.8 bits;  conditional E-value: 1.4e-07
      RuvB_N  35 hvllyGpPGlGkttlakiiakelgvklkitsgPvl......ekagdlaalltnleek..dvlfideihrlsraveevl 104
                  vll GpPG Gkt lak +a+e ++++ +  gP l      e ++ +  ++ + +++   +lf de+  l ++ e+ l
  KHJ31977.1 523 GVLLWGPPGCGKTLLAKAVANESKANFISIKGPELlnkyvgESERAVRQVFERARSSipCILFFDELDALVPKREDSL 600
                 69*******************************872211111222333333333322224677777777777776666 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       5.6   2.4e+03     106     154 ..     132     194 ..      36     199 .. 0.46
   2 !   16.5   0.0     2e-05    0.0085      24      48 ..     216     240 ..     209     250 .. 0.86
   3 !   19.0   0.0   3.4e-06    0.0014      16      61 ..     513     555 ..     511     564 .. 0.82
   4 ?    1.5   0.0       0.8   3.4e+02     123     158 ..     569     611 ..     563     627 .. 0.68

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 5.6
      AAA_16 106 a.............avpelagaea.....srllellkrllallsrderplvlvlDdlqwadeaslql 154
                               ++++l+++       +r   ++kr +++    ++p+ + lDdl  +++  +ql
  KHJ31977.1 132 DnkilplssqihqeSTSKLDRQTNgepklKRRKGEFKRQIDR----SPPTGISLDDLGGVEDVIQQL 194
                 122222222222221222222222333444444444444422....334666666666555555555 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 2e-05
      AAA_16  24 pelvllsGesGvGKsslvrellral 48 
                 p+ vll+G++G+GK+ +++ ++ ++
  KHJ31977.1 216 PRGVLLHGPPGCGKTMIANIFAAEI 240
                 499***************9988766 PP

  == domain 3  score: 19.0 bits;  conditional E-value: 3.4e-06
      AAA_16  16 lervrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcd 61 
                 + +v   +p  vll G++G+GK+ l+++++++ +++   f++ k  
  KHJ31977.1 513 FASVGITTPAGVLLWGPPGCGKTLLAKAVANESKAN---FISIKGP 555
                 66677788899*******************988777...6666655 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.8
      AAA_16 123 lkrllallsrderplvlvlDdlq........wadeaslqllaaL 158
                 +++ ++++++ + p +l++D+l+         + eas ++  +L
  KHJ31977.1 569 VRQVFERARS-SIPCILFFDELDalvpkredSLSEASCKVVNTL 611
                 5556666776.668*********666555555555555555555 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   1.1e-06   0.00046       1     136 [.     218     341 ..     218     343 .. 0.76
   2 !   15.2   0.0   3.9e-05     0.016       1      34 [.     523     556 ..     523     642 .. 0.63

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 1.1e-06
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.G-SEEEEESGGG--...HHHHHHHHHHHHSSEEE CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.egeilvlDEverae...sevlnsLlslleerrll 95 
                 +vlL GppG+gK+++a  +aa ++ ++     ++      l+ +++  ++ ++    ++ +a++  ++++++DE+e +      ++ ++ + +  + l 
  KHJ31977.1 218 GVLLHGPPGCGKTMIANIFAAEIGVSYIPLSAPS------LVAGMS--GESEKKIREIFDEAVKvAPCLVFIDEIEVIMgkrETAQREMEKRIVAQMLT 308
                 59********************987765544443......666666..455556666677777778999999999966433345667788888888888 PP

                 ..-SSSEEE---......-EEEEEESS--.-TT-TTHHHHT CS
       AAA_5  96 leeggelvkaknddllerfrviatanpldrslnelspalrs 136
                  ++   l+k + +     ++++a++n++d    +l+palr+
  KHJ31977.1 309 CMDEISLIKTNGKP----VMIMAATNRPD----CLDPALRR 341
                 88888888877754....99999999999....99999987 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 3.9e-05
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--T CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltr 34 
                 +vlL GppG+gK+ la+ +a   ++++  + +++
  KHJ31977.1 523 GVLLWGPPGCGKTLLAKAVANESKANFISIKGPE 556
                 59****************9998887777776665 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.5e-05     0.011       2      47 ..     219     294 ..     219     355 .. 0.68
   2 !   15.7   0.0     3e-05     0.013       2      43 ..     524     567 ..     524     613 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.5e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqqskt............................d 47 
                 vll+G+pG+GK+  a   +++ g  ++ ls ++l   + g+ +++++                             
  KHJ31977.1 219 VLLHGPPGCGKTMIANIFAAEIGvsYIPLSAPSLVAGMSGESEKKIReifdeavkvapclvfideievimgkretA 294
                 799******************************9999999777766655555555555555555555555555441 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 3e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtdqq 43 
                 vll G+pG+GK+ la+ ++++ +  ++ +  ++l+++++g+ ++
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANESKanFISIKGPELLNKYVGESER 567
                 6899***************9999888888899988888875443 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   5.6e-06    0.0024       5      88 ..     219     299 ..     216     320 .. 0.74
   2 !   13.6   0.0   0.00012     0.052       5      75 ..     524     591 ..     521     627 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 5.6e-06
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderd....kkladpekllelileklkeekktylflDEiqevpewekalkslvd 88 
                 +++ G+  +GKT++++ ++ e       + yi l  +++    +  + ++k+ e++ e +k     ++f+DEi  + + +++ ++ ++
  KHJ31977.1 219 VLLHGPPGCGKTMIANIFAAEIG-----VSYIPLSAPSLvagmS-GESEKKIREIFDEAVKV-APCLVFIDEIEVIMGKRETAQREME 299
                 7899**********877776655.....9********9954321.11233566666666655.7899******988776666665555 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 0.00012
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqe 75 
                 +++ G+  +GKT l+k +++e+     +++ i+  +  +k   ++e+  + ++e+++++   +lf+DE   
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANESK---ANFISIKGPELLNKYVGESERAVRQVFERARSSIPCILFFDELDA 591
                 5788999************8888...8999999888888777777767777777755557789*****865 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1         8   3.4e+03      52      87 ..      40      72 ..      16      97 .. 0.51
   2 !   12.8   0.0   0.00025      0.11       8      41 ..     219     243 ..     214     317 .. 0.76
   3 !   15.5   0.0   3.8e-05     0.016       8      44 ..     524     551 ..     519     631 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 8
      AAA_22 52 sskdllrellralglelka.erlsseellealeqalr 87
                +  ++++++ +       + +r +++ l e +e+al+
  KHJ31977.1 40 TVNSIYENIRNSNS----SlKRRNKRNLEESIERALQ 72
                33333333332222....2222333333344444433 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 0.00025
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpe 41 
                 ++++G++G+GKT+ ++ ++ +          +++
  KHJ31977.1 219 VLLHGPPGCGKTMIANIFAAEI---------GVS 243
                 689************9999887.........333 PP

  == domain 3  score: 15.5 bits;  conditional E-value: 3.8e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvf 44 
                 ++++G++G+GKT+l++ ++++          ++ +++
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANES---------KANFIS 551
                 5799****************97.........333333 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0    0.0013      0.56       7     116 ..     220     323 ..     215     330 .. 0.62
   2 !   17.7   0.0   7.2e-06    0.0031       6     104 ..     524     616 ..     520     626 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.0013
                 EEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG---..----THHHHHHHHHTTT-HHHHTTSEEEEETGGG----.---------HHHHHHHHHH CS
       AAA_2   7 lllgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegGivllDEidKihpk.essgadvSregVqrdLLqi 102
                 ll gp g+Gkt++a+  a  + v    + i + a +l    + e+e+ + +   +    v       v++DEi+ i  k e++++++ +   +  +L  
  KHJ31977.1 220 LLHGPPGCGKTMIANIFAAEIGV----SYIPLSAPSLVAgmSGESEKKIREIFDE-AVKV---APCLVFIDEIEVIMGKrETAQREMEKRI-VAQMLTC 309
                 67788888888888888888887....4444444444442212222333222221.1111...13489**********9777777777765.5556778 PP

                 HH--EE-------E CS
       AAA_2 103 leggtltdkqgrkv 116
                 +++  l + +g++v
  KHJ31977.1 310 MDEISLIKTNGKPV 323
                 88888877777655 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 7.2e-06
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS...EEEEETGGG----.---------HHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG...ivllDEidKihpk.essgadvSregVqrdLL 100
                 +ll gp g+Gkt+laka+a+  ++    ++i +   ell      ++v + + a     +++ +    i+++DE+d   pk e s ++ S   V++ LL
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANESKA----NFISIKGPELLN-----KYVGESERAVRQVFERARSSipcILFFDELDALVPKrEDSLSEASC-KVVNTLL 612
                 6889****************9985....***********9.....88888888888888888877899************96666666665.5777777 PP

                 HHHH CS
       AAA_2 101 qile 104
                   l+
  KHJ31977.1 613 TELD 616
                 6666 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   6.3e-05     0.027      23      42 ..     217     236 ..     206     241 .. 0.80
   2 !   13.1   0.0   0.00011     0.045      24      42 ..     523     541 ..     508     545 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 6.3e-05
  Mg_chelatase  23 HnlllvGppGsGKtmlakrl 42 
                     +ll GppG+GKtm+a+ +
    KHJ31977.1 217 RGVLLHGPPGCGKTMIANIF 236
                   679**************865 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 0.00011
  Mg_chelatase  24 nlllvGppGsGKtmlakrl 42 
                    +ll GppG+GKt+lak++
    KHJ31977.1 523 GVLLWGPPGCGKTLLAKAV 541
                   589*************987 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   0.00012     0.053       1      26 [.     219     244 ..     219     331 .. 0.77
   2 !   13.1   0.0   0.00022     0.095       1      25 [.     524     548 ..     524     610 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 0.00012
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   ++l+Gp+g+GK+++a+ +a+++  ++
    KHJ31977.1 219 VLLHGPPGCGKTMIANIFAAEIGVSY 244
                   689****************9998544 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 0.00022
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkk 25 
                   ++l+Gp+g+GK++lak +a++   +
    KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANESKAN 548
                   679**************88765544 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   3.1e-05     0.013      48      87 ..     219     258 ..     210     313 .. 0.76
   2 ?   -1.0   0.0       3.2   1.4e+03      64      98 ..     450     484 ..     413     502 .. 0.78
   3 !   10.6   0.0   0.00091      0.39      48     112 ..     524     589 ..     519     607 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 3.1e-05
       Rad17  48 LLisGPsGCgkstvvkvLskelgiklrewlnpvslkepdn 87 
                 +L+ GP+GCgk+ + ++ + e g++++  + p ++   + 
  KHJ31977.1 219 VLLHGPPGCGKTMIANIFAAEIGVSYIPLSAPSLVAGMSG 258
                 699************************9999887655544 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 3.2
       Rad17  64 vLskelgiklrewlnpvslkepdnqksdfkgltek 98 
                  +sk ++i++++++ ++   +p+ +++ f ++ ++
  KHJ31977.1 450 SMSKDFSISYQDFISAIAKVQPSAKREGFTTIPDT 484
                 57888888888888888877888888777766555 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00091
       Rad17  48 LLisGPsGCgkstvvkvLskelgiklrewlnpvslkepdn.qksdfkgltekesrflsqiesfkel 112
                 +L+ GP+GCgk+   k ++ e   +++    p +l++     +  ++ ++e   + ++ i  f el
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANESKANFISIKGPELLNKYVGeSERAVRQVFERARSSIPCILFFDEL 589
                 5899****************9999999988888775543326667777777777777777777776 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.1   0.00011     0.046      51     124 ..     217     293 ..     213     328 .. 0.68
   2 !   12.8   0.0   0.00012     0.051      52     104 ..     523     574 ..     517     580 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00011
                 XXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXX-S-EEEEEEEE CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelg.edvpfvalsgsevyslevkk..tevltqalrksigvrikeekevleGevve 124
                 r+vLl Gp+g Gkt +a   + e+g + +p  a s     s e +k   e++ +a++ +  +   +e ev+ G+  +
  KHJ31977.1 217 RGVLLHGPPGCGKTMIANIFAAEIGvSYIPLSAPSLVAGMSGESEKkiREIFDEAVKVAPCLVFIDEIEVIMGKRET 293
                 89***********************5556665433333345554441257777777777666666666676666544 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 0.00012
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXX CS
       TIP49  52 avLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkkte.vltqalr 104
                 +vLl Gp+g Gkt la a+++e  ++  f++++g e+    v  +e ++ q + 
  KHJ31977.1 523 GVLLWGPPGCGKTLLAKAVANE--SKANFISIKGPELLNKYVGESErAVRQVFE 574
                 79******************99..5689*********99998888734555555 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   0.00078      0.33      48     119 ..     217     286 ..     212     309 .. 0.76
   2 !   13.5   0.0    0.0001     0.043      44      71 ..     518     545 ..     509     558 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00078
   IstB_IS21  48 enivllGpsGvGKshlaialgveavraglsvlfvrvedLveelkrarrdgklaralkrllkv..dllilDdlgl 119
                  +++l Gp+G GK+ +a  ++    + g+s + ++++ Lv+ ++ + ++ k+ ++ ++ +kv   l+ +D++ +
  KHJ31977.1 217 RGVLLHGPPGCGKTMIANIFAA---EIGVSYIPLSAPSLVAGMSGE-SEKKIREIFDEAVKVapCLVFIDEIEV 286
                 5799*************98865...457777777888899988765.566788888887777445888888765 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 0.0001
   IstB_IS21  44 iekkenivllGpsGvGKshlaialgvea 71 
                 i++ ++++l Gp+G GK+ la a++ e 
  KHJ31977.1 518 ITTPAGVLLWGPPGCGKTLLAKAVANES 545
                 5667899****************99876 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00099      0.42      16      43 ..     216     241 ..     210     251 .. 0.85
   2 !   13.2   0.0   9.6e-05     0.041      15      51 ..     520     554 ..     511     562 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00099
  Zeta_toxin  16 PklillgGqpGAGKselaellkdelerq 43 
                 P  +ll G pG+GK+ +a+ +++e+  +
  KHJ31977.1 216 PRGVLLHGPPGCGKTMIANIFAAEI--G 241
                 7889*****************9998..4 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 9.6e-05
  Zeta_toxin  15 rPklillgGqpGAGKselaellkdelerqgnvvrldp 51 
                 +P+ +ll G pG+GK+ la+++++e   + n++ +++
  KHJ31977.1 520 TPAGVLLWGPPGCGKTLLAKAVANES--KANFISIKG 554
                 7999*********************8..899999876 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0    0.0003      0.13       3      31 ..     219     247 ..     217     276 .. 0.87
   2 !    9.4   0.0    0.0022      0.95       3      24 ..     524     545 ..     523     551 .. 0.87
   3 ?   -1.3   0.0       4.1   1.7e+03      62     110 ..     562     613 ..     555     634 .. 0.62

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.0003
                 EEEEC-TTTCHHHHHHHHHHHHCTS-SCC CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegklpq 31 
                 v+l+G++G+GKT+ +  +a ++  ++ p 
  KHJ31977.1 219 VLLHGPPGCGKTMIANIFAAEIGVSYIPL 247
                 89**************9999998887766 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0022
                 EEEEC-TTTCHHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklalaw 24 
                 v+l G++G+GKT L++ +a + 
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANES 545
                 6889************999875 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 4.1
                 CTS--SSS-CCHHHHCCSCCCEE...EEEE-STT-SS-TCH.............HH CS
       NACHT  62 lpepaapvsevwavllelperlL...lilDglDelvtdlgq....kekqpvrtlLs 110
                   e++++v++    + e++++     l +D lD lv + +     +  + v+tlL+
  KHJ31977.1 562 VGESERAVRQ----VFERARSSIpciLFFDELDALVPKREDslseASCKVVNTLLT 613
                 5556666666....444444433444889999999987766665333333444444 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.2         7     3e+03      30      80 ..      43      97 ..      35     153 .. 0.60
   2 !    9.6   0.0    0.0028       1.2       7      34 ..     212     239 ..     208     314 .. 0.90
   3 !   12.2   0.0   0.00045      0.19      13      64 ..     523     572 ..     514     615 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 7
                HHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSB.HHHH......H CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxx......x RF
    ABC_tran 30 llagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpelt.vren......e 80
                 ++++ ++ + +++ ++   k++ +es ++ +++l q+ q  ++ +   en      e
  KHJ31977.1 43 SIYENIRNSNSSLKRRN---KRNLEESIERALQILRQDIQEESDNSiPTENlvedlhE 97
                55555555555553332...22344677777777777755554444244445555541 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0028
                 EEETTSEEEEEESTTSSHHHHHHHHTTS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   7 klkegekvaivGenGaGKStLlkllagl 34 
                  +++ + v + G+ G+GK+ +++++a +
  KHJ31977.1 212 GIEPPRGVLLHGPPGCGKTMIANIFAAE 239
                 567777899***************9876 PP

  == domain 3  score: 12.2 bits;  conditional E-value: 0.00045
                 EEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  13 kvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvl 64 
                  v + G+ G+GK+ L+k++a+++k     i ++g +l ++   ++++ ++ +
  KHJ31977.1 523 GVLLWGPPGCGKTLLAKAVANESKA--NFISIKGPELLNKYVGESERAVRQV 572
                 57899****************9974..5666666666664444444444444 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   0.00068      0.29       2      48 ..     219     266 ..     218     302 .. 0.81
   2 !   11.1   0.0    0.0008      0.34       2      38 ..     524     565 ..     523     587 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00068
      AAA_28   2 ivitGgestGKTtlleaLaar.gypvvpEaareileeklakgedalpw 48 
                 + + G++++GKT +++ +aa+ g++++p +a  ++   + + e+++++
  KHJ31977.1 219 VLLHGPPGCGKTMIANIFAAEiGVSYIPLSAPSLVAGMSGESEKKIRE 266
                 6799***************99899999877777776666555555555 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.0008
      AAA_28   2 ivitGgestGKTtlleaLaar...gypvv..pEaareileek 38 
                 + + G++++GKT l++a a++   ++  +  pE   +++ e 
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANEskaNFISIkgPELLNKYVGES 565
                 6789***************76545433334777777666555 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0032       1.4       1      25 [.     219     264 ..     219     359 .. 0.69
   2 !   12.7   0.0   0.00032      0.14       1      44 [.     524     588 ..     524     640 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0032
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.....................g 25 
                 +ll G+pG+GKt +a+  + + g+                      
  KHJ31977.1 219 VLLHGPPGCGKTMIANIFAAEIGVsyiplsapslvagmsgesekkI 264
                 7899************998887555555555555555555554443 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00032
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf....................gvnlrdvakenglllevdpe 44 
                 +ll G+pG+GKt lak+++++  ++                    ++++ + a+ + +++ +++e
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANESkANfisikgpellnkyvgeseraVRQVFERARSSIPCILFFDE 588
                 7899**************77643334777776666666666655555555555555555555555 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0    0.0084       3.6      36      53 ..     219     236 ..     215     241 .. 0.84
   2 ?    4.4   0.0     0.058        25     128     173 ..     262     307 ..     248     326 .. 0.81
   3 !    7.1   0.1    0.0085       3.6      36      52 ..     524     540 ..     518     544 .. 0.87
   4 ?    0.1   0.0       1.2   5.2e+02     128     185 ..     567     628 ..     550     630 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0084
      AAA_25  36 allaGapgtGKttlaldl 53 
                 +ll G+pg+GKt++a   
  KHJ31977.1 219 VLLHGPPGCGKTMIANIF 236
                 689**********99655 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.058
      AAA_25 128 advdaleaaieevegvrlvviDplsralggdensnsdv.galveale 173
                  +++++ +++ +v+ + lv iD +  ++g  e++++++ +++v+++ 
  KHJ31977.1 262 KKIREIFDEAVKVA-PCLVFIDEIEVIMGKRETAQREMeKRIVAQML 307
                 56777888888876.99********************8888777764 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0085
      AAA_25  36 allaGapgtGKttlald 52 
                 +ll+G+pg+GKt la  
  KHJ31977.1 524 VLLWGPPGCGKTLLAKA 540
                 69***********9965 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 1.2
      AAA_25 128 advdaleaaieevegvrlvviDplsralggdensnsd.....vgalvealeriarrtgaavll 185
                 ++v+++ +++++   +  + +D l+++++  e+s s+     v+ l++ l+ ++ rtg+ v++
  KHJ31977.1 567 RAVRQVFERARS-SIPCILFFDELDALVPKREDSLSEasckvVNTLLTELDGLSNRTGIYVIA 628
                 556667777777.5588899999***99997776666567756999***********999886 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00063      0.27       2      89 ..     219     301 ..     218     333 .. 0.68
   2 !   10.7   0.0   0.00083      0.35       2      87 ..     524     605 ..     523     636 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00063
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeeke.kefefkkGpvfanllladeinrappktqsalleameer 89 
                 vll+g PG +kt++++ +a  +++++      p   Ps + G++  +ek+ +e+  ++  v   l++ dei+  + k ++a  e me r
  KHJ31977.1 219 VLLHGPPGCGKTMIANIFAAEIGVSYI-----PLSAPSLVAGMSGESEKKiREIFDEAVKVAPCLVFIDEIEVIMGKRETAQRE-MEKR 301
                 89*******************998764.....3345666666665555543555556667777788888888888887777654.4443 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00083
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkkGpvfanllladeinrappktqsalleame 87 
                 vll g PG +ktll+ka+a+  +++f  i+  p+ll   + G +  ++ ++ fe  +  +   +l+ de++   pk + +l ea  
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANESKANFISIK-GPELLNKYV-GESE-RAVRQVFERARSSI-PCILFFDELDALVPKREDSLSEASC 605
                 7999**********************9997.688886654.4332.33344555555554.3466777777777777777777655 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0    0.0017      0.73      21      51 ..     218     250 ..     187     255 .. 0.76
   2 !   10.7   0.0   0.00094       0.4      20      60 ..     522     562 ..     494     572 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0017
                 EEEEEESTTSSHHHHHHHHHHHTT--..----T CS
        TsaE  21 vilLeGdLGaGKTtlvrglakalgve..evkSP 51 
                  +lL+G+ G+GKT+++  +a+++gv+  + + P
  KHJ31977.1 218 GVLLHGPPGCGKTMIANIFAAEIGVSyiPLSAP 250
                 39**********************986666666 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00094
                 EEEEEEESTTSSHHHHHHHHHHHTT--..----TTTTSEEEEE CS
        TsaE  20 dvilLeGdLGaGKTtlvrglakalgve..evkSPTFtlveeYe 60 
                 + +lL G+ G+GKT l++++a++ + +  ++k P   l+++Y 
  KHJ31977.1 522 AGVLLWGPPGCGKTLLAKAVANESKANfiSIKGP--ELLNKYV 562
                 249*******************999987788888..5666665 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   0.00098      0.42      30     110 ..     213     285 ..     202     331 .. 0.72
   2 !    9.2   0.0    0.0019      0.82      31      62 ..     519     549 ..     501     555 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00098
       AAA_7  30 lknkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiiesklekrrkgvyg.PpggkklvvFvDDln 110
                 ++  + vll Gp G+GKt+i++ +  ++      +  i +s    a +l   +  + ek+ ++++  + +   ++vF+D++ 
  KHJ31977.1 213 IEPPRGVLLHGPPGCGKTMIANIFAAEIG-----VSYIPLS----APSLVAGMSGESEKKIREIFDeAVKVAPCLVFIDEIE 285
                 5556789*************998888777.....4444443....3445555666666666666641344556666666665 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0019
       AAA_7  31 knkkpvllvGptGtGKtviikdllkkldkeky 62 
                 +    vll Gp G+GKt+++k + ++ +  ++
  KHJ31977.1 519 TTPAGVLLWGPPGCGKTLLAKAVANESK-ANF 549
                 556679***************9998877.555 PP

>> Cytidylate_kin2  Cytidylate kinase-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   0.00027      0.11       8      68 ..     225     286 ..     220     317 .. 0.77
   2 ?    7.4   0.0      0.01       4.4       8      92 ..     530     611 ..     527     626 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00027
  Cytidylate_kin2   8 yGsgGetigeaLAekLglpfydreiieevakelglseeev.eevdersrlssflskllaarv 68 
                       G+g++ i+   A + g+ ++    +  va  +g se+++ e +de+ +++  l  +   +v
       KHJ31977.1 225 PGCGKTMIANIFAAEIGVSYIPLSAPSLVAGMSGESEKKIrEIFDEAVKVAPCLVFIDEIEV 286
                      6***************************************9999997776666654444444 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.01
  Cytidylate_kin2   8 yGsgGetigeaLAekLglpfydreiieevakelglseeeveevdersrlssflskllaarvagdtldeklddelfeaqervirel 92 
                       G+g++ +++a+A++ + +f++ + +e + k  g se  v++v er+r+s     ++++    d l  k +d+l ea  +v+++l
       KHJ31977.1 530 PGCGKTLLAKAVANESKANFISIKGPELLNKYVGESERAVRQVFERARSSIPCILFFDE---LDALVPKREDSLSEASCKVVNTL 611
                      59**************************************9999977755444445544...34456666666666666666666 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.022       9.5      24      42 ..     218     236 ..     208     249 .. 0.86
   2 !   12.3   0.0   0.00024       0.1      19      54 ..     518     550 ..     503     566 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.022
                      -EEEECSTTSSHHHHHHHH CS
  Sigma54_activat  24 svlitGesGtGKellarai 42 
                       vl++G  G+GK+++a+  
       KHJ31977.1 218 GVLLHGPPGCGKTMIANIF 236
                      69**************975 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00024
                      CTSSS-EEEECSTTSSHHHHHHHHHHHSTTTTS-EE CS
  Sigma54_activat  19 aktdlsvlitGesGtGKellaraiheaskrkekpfv 54 
                      ++t++ vl+ G  G+GK+lla+a+ ++sk   ++f+
       KHJ31977.1 518 ITTPAGVLLWGPPGCGKTLLAKAVANESK---ANFI 550
                      578899******************99887...4455 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00068      0.29      13      41 ..     210     238 ..     175     244 .. 0.79
   2 ?   -0.3   0.1       1.3   5.5e+02     117     153 ..     273     312 ..     255     318 .. 0.61
   3 !    8.5   0.0    0.0026       1.1      14      38 ..     516     540 ..     507     552 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00068
      ATPase  13 kgGipegrvvlitGepGtGKtifalqFli 41 
                 + Gi   r vl+ G pG+GKt++a  F+ 
  KHJ31977.1 210 EIGIEPPRGVLLHGPPGCGKTMIANIFAA 238
                 378889999***************99986 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 1.3
      ATPase 117 eikakrvviDsitgl...ayeekeavaReilrqlvrvlkk 153
                 ++    v iD i+++    ++++ ++ ++i+ q+++ + +
  KHJ31977.1 273 KVAPCLVFIDEIEVImgkRETAQREMEKRIVAQMLTCMDE 312
                 3445678899999994322334455566677777776655 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0026
      ATPase  14 gGipegrvvlitGepGtGKtifalq 38 
                  Gi   + vl+ G pG+GKt++a+ 
  KHJ31977.1 516 VGITTPAGVLLWGPPGCGKTLLAKA 540
                 58888899**************986 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   3.2      0.73   3.1e+02      91     175 ..      23     106 ..       2     173 .. 0.56
   2 !    7.5   0.0    0.0073       3.1      20      33 ..     219     232 ..     210     309 .. 0.82
   3 !    8.9   0.0    0.0028       1.2      19      73 ..     523     575 ..     510     584 .. 0.67

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.73
      AAA_11  91 vRvgneeeriseavksvsleekvekrlekee..kaqlakeiskeleklakelrafeeeeekeklkkskekskskleqerrklkkerk 175
                 +++  e+e+ + + k+++++++ e+ +++++  k    +++++ +e+++++l+   +++++e+ +   +++  +  +e++ ++k+++
  KHJ31977.1  23 CKLIDEQEKLEISSKAITVNSIYENIRNSNSslK---RRNKRNLEESIERALQILRQDIQEESDNSIPTENLVEDLHESNVVNKSIT 106
                 3444455577777888888888888777764331...23333333334444444344433333333333333333333333333333 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0073
      AAA_11  20 tliqGPPGtgKTkt 33 
                 +l++GPPG+gKT  
  KHJ31977.1 219 VLLHGPPGCGKTMI 232
                 69**********54 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.0028
      AAA_11  19 itliqGPPGtgKTktivellsqllsrrkseeeksakpriL..vCapSNaAvDeller 73 
                  +l++GPPG+gKT    ++ ++       +    ++p++L  + ++S+ Av ++ er
  KHJ31977.1 523 GVLLWGPPGCGKTLLAKAVANESK----ANFISIKGPELLnkYVGESERAVRQVFER 575
                 579**********98888888882....22333444444333566666666665555 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0     0.012         5       2      22 ..     220     239 ..     219     297 .. 0.63
   2 !   10.0   0.0    0.0012      0.51       5      71 ..     528     589 ..     524     597 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.012
  Viral_helicase1   2 vvhGvpGcGKStlirkllrts 22 
                      + hG pGcGK+  i +++  +
       KHJ31977.1 220 LLHGPPGCGKTM-IANIFAAE 239
                      67********98.66665553 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.0012
  Viral_helicase1   5 GvpGcGKStlirkllrts.liltvnrptaelltegkpklpnlsvrtvdsflmalvkstkgkililDEy 71 
                      G pGcGK+ l + ++++s  ++ +++   ell++ + ++++  vr v +   + ++ +   il++DE 
       KHJ31977.1 528 GPPGCGKTLLAKAVANESkANFISIKG-PELLNKYVGESERA-VRQVFERARSSIP-C---ILFFDEL 589
                      77***************9988888888.89999988555544.4433333333333.3...8999985 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0     0.019       7.9      24      45 ..     219     240 ..     214     314 .. 0.78
   2 !    9.9   0.0    0.0018      0.78      22      84 ..     522     595 ..     515     618 .. 0.66

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.019
                      EEEEEETT--HHHHHHCC--TT CS
  Sigma54_activ_2  24 vfltGekGsgkelvArlLhkns 45 
                      v+l G++G+gk+++A++++ + 
       KHJ31977.1 219 VLLHGPPGCGKTMIANIFAAEI 240
                      99**************998765 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0018
                      S-EEEEEETT--HHHHHHCC--TTS-EE--SSTTHHHH-H..........HHHHHHT...TTSEEEEEE-TT--HH CS
  Sigma54_activ_2  22 lpvfltGekGsgkelvArlLhknsgpwleifvverlaklp..........ldlleqa...kggtLylkdiadlska 84 
                      + v+l G++G+gk+l A++ +++s  +     ++ +  l+           +++e+a    + +L++ +++ l ++
       KHJ31977.1 522 AGVLLWGPPGCGKTLLAKAVANESKANF--ISIKGPELLNkyvgeseravRQVFERArssIPCILFFDELDALVPK 595
                      569*****************99987642..2222222222223333344455555543335666777777776655 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.62   2.6e+02      25      70 ..     179     233 ..     165     248 .. 0.64
   2 !   14.9   0.0   2.5e-05     0.011      18     116 ..     480     589 ..     465     640 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.62
      DUF815  25 vklddLvgidkqkealvente.......qfle..glpannvLLwGarGtGKSslv 70 
                 ++lddL g+++  ++l+e ++        +le   +p + vLL G  G+GK  + 
  KHJ31977.1 179 ISLDDLGGVEDVIQQLIEAVAipmlypeIYLEigIEPPRGVLLHGPPGCGKTMIA 233
                 5666666666666666665531111111222211356778999999999997655 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 2.5e-05
      DUF815  18 pveevdevklddLvgidkqke.al...venteqfleg..lpannvLLwGarGtGKSslvkallneyaeeg..Lrlievekedlkelpklvellrerper 108
                 +++++   ++  L+ + +q + ++   ++n e+f++   ++   vLLwG  G+GK  l ka+ ne +++   ++  e+ ++ + e ++ v+++ er++ 
  KHJ31977.1 480 TIPDTTWSHIGALHSVREQLQmTIvepIRNPEAFASVgiTTPAGVLLWGPPGCGKTLLAKAVANESKANFisIKGPELLNKYVGESERAVRQVFERARS 578
                 55555555555666655543312212246777787641234467*********************9999833444678888888888887777655543 PP

      DUF815 109 ...filfvDDL 116
                    +ilf D L
  KHJ31977.1 579 sipCILFFDEL 589
                 22277888876 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.2       9.6   4.1e+03      32      71 ..      46      84 ..      42     105 .. 0.64
   2 !    7.9   0.0     0.009       3.8       2      24 ..     223     245 ..     222     304 .. 0.83
   3 !    8.2   0.0    0.0076       3.2       2      25 ..     528     551 ..     527     578 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 9.6
                HHHHTTTSHSSHHHHCTSHHHHHHHHHHHHHHHHHHHHHS CS
      AAA_17 32 eeakrgglakardemrklpleekkelqkeaaekiaeeakk 71
                e++++++++ +r + r+l+++++++ ++++ ++i+ee+++
  KHJ31977.1 46 ENIRNSNSSLKRRNKRNLEESIERA-LQILRQDIQEESDN 84
                5566666555666666666555554.45666778777644 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.009
                 E-TTSSHHHHHHHHHHHHTEEEE CS
      AAA_17   2 GgPGsGKgtqceklvekygfthl 24 
                 G+PG+GK+ +++  + ++g++++
  KHJ31977.1 223 GPPGCGKTMIANIFAAEIGVSYI 245
                 9****************998885 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0076
                 E-TTSSHHHHHHHHHHHHTEEEEE CS
      AAA_17   2 GgPGsGKgtqceklvekygfthls 25 
                 G+PG+GK+ +++ ++ + +  ++s
  KHJ31977.1 528 GPPGCGKTLLAKAVANESKANFIS 551
                 9**********9999887666655 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0      0.02       8.6       5      22 ..     219     236 ..     216     274 .. 0.91
   2 !    9.6   0.0    0.0016      0.68       4      23 ..     523     544 ..     520     567 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.02
      AAA_24   5 iliyGpsgiGKTtlakel 22 
                 +l+ Gp+g GKT++a+ +
  KHJ31977.1 219 VLLHGPPGCGKTMIANIF 236
                 799***********9877 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0016
      AAA_24   4 kiliyGpsgiGKTtlakel..g 23 
                  +l++Gp+g GKT lak    +
  KHJ31977.1 523 GVLLWGPPGCGKTLLAKAVanE 544
                 589*************988654 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.3       6.3   2.7e+03      70     101 ..      42      72 ..      16      85 .. 0.73
   2 ?    6.1   0.0     0.013       5.4      23      38 ..     219     234 ..     214     243 .. 0.85
   3 !    8.8   0.0    0.0019      0.81      23      45 ..     524     546 ..     520     550 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 6.3
                 HXXHHHHHCCCTTSSSS-STTSHHHHHHHHCC CS
      NB-ARC  70 etilkeLslseddleekeeveslkrklvrlLl 101
                 ++i +++ +s++ l+  ++++ l++ + r+L+
  KHJ31977.1  42 NSIYENIRNSNSSLKRRNKRN-LEESIERALQ 72 
                 456667777766666666666.7777777765 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.013
                 EEEEESTTSSHHHHHH CS
      NB-ARC  23 valvGmgGvGKttlak 38 
                 v l+G +G+GKt +a+
  KHJ31977.1 219 VLLHGPPGCGKTMIAN 234
                 679*********9985 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0019
                 EEEEESTTSSHHHHHHHHCCSHC CS
      NB-ARC  23 valvGmgGvGKttlakqilnksd 45 
                 v l G +G+GKt lak + n+s+
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANESK 546
                 6689**************99954 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0    0.0021       0.9      36      57 ..     217     238 ..     211     245 .. 0.89
   2 ?   -0.5   0.0       1.6   6.8e+02     117     143 ..     273     299 ..     246     316 .. 0.74
   3 ?    4.0   0.0     0.066        28      36      60 ..     522     546 ..     513     555 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0021
        TniB  36 pnlllvGdsnnGKtmivekFar 57 
                 + +ll+G++ +GKtmi++ Fa+
  KHJ31977.1 217 RGVLLHGPPGCGKTMIANIFAA 238
                 689***************9986 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.6
        TniB 117 elkvrvLiiDEihnllagsarkqrefl 143
                 ++ + ++ iDEi+ ++  + ++qre+ 
  KHJ31977.1 273 KVAPCLVFIDEIEVIMGKRETAQREME 299
                 455667889****99988889999875 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.066
        TniB  36 pnlllvGdsnnGKtmivekFarlhp 60 
                   +ll+G++ +GKt +++  a++ +
  KHJ31977.1 522 AGVLLWGPPGCGKTLLAKAVANESK 546
                 679*************998887765 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0    0.0021      0.91      12     115 ..     218     317 ..     212     333 .. 0.68
   2 ?    5.7   0.0     0.042        18      13      33 ..     524     544 ..     514     577 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0021
      AAA_19  12 vllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgaeatTiHrlalldfddlltealelle..eaeeekklqeeelliv 108
                  +l+ ++pG+GKT + +   a++        ++ l++ + g + k++re  +++ + a  +  +      d+++  ++  e  ++e ek + ++ l   
  KHJ31977.1 218 GVLLHGPPGCGKTMIANIFAAEIGVSYIPLSAPSLVAGMSGESEKKIREIFDEAVKVAPCLVFI------DEIEVIMGKREtaQREMEKRIVAQMLTCM 310
                 5899*********999888888777765555888999999999999999985544444443333......22222222211335566677767778888 PP

      AAA_19 109 DEfqdvd 115
                 DE++ ++
  KHJ31977.1 311 DEISLIK 317
                 8888776 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.042
      AAA_19  13 llvtaGpGtGKTrvlkhival 33 
                 +l+ ++pG+GKT + k++ ++
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANE 544
                 7899********988776655 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.018       7.8      22      42 ..     219     239 ..     212     310 .. 0.89
   2 !    7.8   0.0    0.0049       2.1      22      41 ..     524     543 ..     504     550 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.018
                 EEEE--TTSSTTHHHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavalave 42 
                 v   Gp G+GKt++a   a+e
  KHJ31977.1 219 VLLHGPPGCGKTMIANIFAAE 239
                 5678***********999986 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0049
                 EEEE--TTSSTTHHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavalav 41 
                 v   Gp G+GKt+la a+a 
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVAN 543
                 6789***********99985 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.3       3.5   1.5e+03      90     119 ..      30      61 ..       4     106 .. 0.55
   2 ?    3.4   0.0      0.15        62      21      42 ..     217     238 ..     208     324 .. 0.83
   3 !    8.7   0.0    0.0035       1.5      23      45 ..     524     546 ..     518     564 .. 0.87
   4 ?   -1.8   0.0       5.5   2.3e+03     108     131 ..     567     593 ..     545     626 .. 0.65

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 3.5
    ATPase_2  90 eleeilk..eksklvfkaielllekikkkgkk 119
                 e  ei++   + + ++++i +   ++k++ k+
  KHJ31977.1  30 EKLEISSkaITVNSIYENIRNSNSSLKRRNKR 61 
                 33333333333344444444444444444333 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.15
    ATPase_2  21 eiyfiYGpegsGKtaLlkeiie 42 
                 + +++ Gp g+GKt + + ++ 
  KHJ31977.1 217 RGVLLHGPPGCGKTMIANIFAA 238
                 557899********98876665 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.0035
    ATPase_2  23 yfiYGpegsGKtaLlkeiienle 45 
                 ++++Gp g+GKt L k ++++++
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANESK 546
                 5789************9999885 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 5.5
    ATPase_2 108 lllekikkkgkk...iiiiiDelqkli 131
                 ++ +++ ++++     i+++Del  l+
  KHJ31977.1 567 RAVRQVFERARSsipCILFFDELDALV 593
                 33333333333366689999**98887 PP

>> AFG1_ATPase  AFG1-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0    0.0014      0.59      60      84 ..     214     238 ..     210     316 .. 0.78
   2 ?    3.5   0.0     0.062        26      61      79 ..     520     538 ..     511     545 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0014
  AFG1_ATPase  60 epvrglYlwGgvGrGKtylmdlffe 84 
                  ep+rg+ l+G+ G GKt++ + f  
   KHJ31977.1 214 EPPRGVLLHGPPGCGKTMIANIFAA 238
                  79****************9988855 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.062
  AFG1_ATPase  61 pvrglYlwGgvGrGKtylm 79 
                  ++ g+ lwG+ G GKt l 
   KHJ31977.1 520 TPAGVLLWGPPGCGKTLLA 538
                  6789************985 PP

>> SKI  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.026        11       1      22 [.     225     246 ..     225     273 .. 0.81
   2 ?    6.8   0.0     0.016       6.7       1      22 [.     530     551 ..     530     576 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.026
                 TTSSHHHHHHHHHHHHTSEEEE CS
         SKI   1 mGaGKstvGkllAkklglefiD 22 
                 +G+GK+ +++++A ++g+++i 
  KHJ31977.1 225 PGCGKTMIANIFAAEIGVSYIP 246
                 6****************99985 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.016
                 TTSSHHHHHHHHHHHHTSEEEE CS
         SKI   1 mGaGKstvGkllAkklglefiD 22 
                 +G+GK+ ++k++A++ + +fi 
  KHJ31977.1 530 PGCGKTLLAKAVANESKANFIS 551
                 6*****************9985 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.053        23     117     135 ..     219     237 ..     213     311 .. 0.91
   2 ?    7.8   0.0    0.0036       1.6     117     137 ..     524     544 ..     520     548 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.053
   Parvo_NS1 117 vwfyGpantGktnlaeaIa 135
                 v+++Gp+ +Gkt++a+  a
  KHJ31977.1 219 VLLHGPPGCGKTMIANIFA 237
                 899************9554 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0036
   Parvo_NS1 117 vwfyGpantGktnlaeaIaka 137
                 v+++Gp+ +Gkt la+a a+ 
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANE 544
                 799**************9986 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.048        21      21      40 ..     219     238 ..     213     331 .. 0.65
   2 ?    4.5   0.1     0.058        25      21      41 ..     524     544 ..     511     554 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.048
      AAA_30  21 avltGpAGtGKttalkalre 40 
                 ++l+Gp+G GKt++ +  ++
  KHJ31977.1 219 VLLHGPPGCGKTMIANIFAA 238
                 6899********98766544 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.058
      AAA_30  21 avltGpAGtGKttalkalrea 41 
                 ++l Gp+G GKt + ka+++ 
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANE 544
                 6789**********9999765 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.33   1.4e+02       2      20 ..     219     237 ..     218     247 .. 0.80
   2 ?   -1.5   0.2       4.7     2e+03      84     122 ..     263     307 ..     254     322 .. 0.58
   3 ?    6.6   0.0     0.015       6.5       2      32 ..     524     554 ..     523     569 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.33
                 EEEE--TTSSHHHHHHHHH CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvl 20 
                 v++ GppG GKt + +  +
  KHJ31977.1 219 VLLHGPPGCGKTMIANIFA 237
                 6789*******98877555 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 4.7
                 HHHHHHHHHHHHH-.EEEE---....STTGGG-HHHHHH.HHHHH CS
    NTPase_1  84 lalealrkalsead.viviDEi....GkmElkskkfkea.veevL 122
                  + e++++a++ a  ++ iDEi    Gk E   +++++  v ++L
  KHJ31977.1 263 KIREIFDEAVKVAPcLVFIDEIevimGKRETAQREMEKRiVAQML 307
                 445555555543333777888755556666666666543134444 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.015
                 EEEE--TTSSHHHHHHHHHHHH...GGGEEE CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkssgvkvgG 32 
                 v++ GppG GKt l k v+++ k + ++++G
  KHJ31977.1 524 VLLWGPPGCGKTLLAKAVANESKANFISIKG 554
                 6788***************999888888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (762 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       899  (0.0501422); expected 358.6 (0.02)
Passed bias filter:                      635  (0.0354175); expected 358.6 (0.02)
Passed Vit filter:                        97  (0.00541023); expected 17.9 (0.001)
Passed Fwd filter:                        42  (0.00234257); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              42  [number of targets reported over threshold]
# CPU time: 0.84u 0.31s 00:00:01.14 Elapsed: 00:00:00.47
# Mc/sec: 4885.49
//
Query:       KHJ31978.1  [L=157]
Description: putative nudix family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-16   60.5   1.0      2e-16   60.2   1.0    1.1  1  NUDIX     NUDIX domain
  ------ inclusion threshold ------
      0.043   13.4   0.0      0.056   13.0   0.0    1.2  1  NUDIX_2   Nucleotide hydrolase


Domain annotation for each model (and alignments):
>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.2   1.0   2.2e-20     2e-16       3     120 ..      24     140 ..      22     150 .. 0.77

  Alignments for each domain:
  == domain 1  score: 60.2 bits;  conditional E-value: 2.2e-20
                 EEEEEEEEEETTSE.EEEEEESSSSTTTEESSEEECBTTSHHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE.EEECSGCSST CS
       NUDIX   3 rravgvvllnekge.vLlvrrskkpfpgWelPgGkvepgEtpeeAArREleEEtGleaellellgrlhylapydgpygdeheilyvfl.eevegelepn 99 
                 r  +gvv lne +  vLl+r+  ++ ++W lP+G+ e +E++ eAA RE++EE+G+++     lg++++++p++  +      ly f+ + v  e +  
  KHJ31978.1  24 RLVAGVVPLNETKThVLLIRS--DTRSNWVLPKGGWELDESITEAAKREAWEEAGIICTIKYDLGEIKETRPPKHLKLAAPKALYRFFeATVIREEAEW 120
                 67899**66666555999974..58889*********************************************99999988888888853333333333 PP

                 STTTEEEEE.EEEHHHHHHHHT CS
       NUDIX 100 denevsevr.wvpleellkekl 120
                  ++ ++  r w +++e+ +e+l
  KHJ31978.1 121 -PESHKRTRyWASYTEA-REAL 140
                 .344444456****999.3333 PP

>> NUDIX_2  Nucleotide hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   6.2e-06     0.056      23      89 ..       4      69 ..       1      80 [. 0.84

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.2e-06
     NUDIX_2 23 dksveeklkrlkesyekeglrrtveavllvhrhelphvLlLqielq.efkLpggklksgedeiegLkr 89
                ++s+e+++ r k++y++ g  r v++v+  ++ +  hvLl+++++  ++ Lp g  + +e+  e+ kr
  KHJ31978.1  4 NRSMESRTGRSKQRYNELG-ERLVAGVVPLNETK-THVLLIRSDTRsNWVLPKGGWELDESITEAAKR 69
                57889999*********99.67899999998876.5999999655549******99999988887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       378  (0.0210832); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1146.04
//
Query:       KHJ31979.1  [L=180]
Description: putative lsm domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.6e-15   54.4   0.0    1.1e-14   53.8   0.0    1.3  1  LSM       LSM domain
  ------ inclusion threshold ------
      0.046   14.7   0.0      0.077   13.9   0.0    1.3  1  DAZAP2    DAZ associated protein 2 (DAZAP2)


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.8   0.0   1.3e-18   1.1e-14       3      66 ..      42     121 ..      40     122 .. 0.95

  Alignments for each domain:
  == domain 1  score: 53.8 bits;  conditional E-value: 1.3e-18
                 HHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTET................EEEEEEEEEEEGGGEEEEE CS
         LSM   3 lkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkk................ekrklglvliRGnnivlis 66 
                 l ++++kk+ v l++gr+l+GtL++ Dqf NlvL+ ++e++  +                  +   g +l+RG+n++l++
  KHJ31979.1  42 LLDMTDKKLMVALRDGRKLIGTLRSWDQFANLVLQSTVERIFVPPssitselettirpglfADIPRGVFLVRGENVLLLG 121
                 66889******************************************************9999999***********986 PP

>> DAZAP2  DAZ associated protein 2 (DAZAP2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   8.6e-06     0.077      79     120 ..      21      62 ..      18      66 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.6e-06
      DAZAP2  79 dkasaasiPPPPPGvapnaAQlAamqGqnvvltqkkenflsG 120
                 +++s ++iP  PP +  +aAQl  m+ ++ +++ + ++ l G
  KHJ31979.1  21 GGHSRPQIPQLPPQMFTTAAQLLDMTDKKLMVALRDGRKLIG 62 
                 56799**************************99998877777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1387.58
//
Query:       KHJ31980.1  [L=202]
Description: putative snf7 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.8e-37  126.9  10.8    5.8e-37  126.9  10.8    1.3  2  Snf7            Snf7
  ------ inclusion threshold ------
        3.5    8.3   9.1        2.7    8.7   0.1    2.3  2  NAM-associated  No apical meristem-associated C-terminal doma


Domain annotation for each model (and alignments):
>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.9  10.8   6.5e-41   5.8e-37       2     172 ..      16     177 ..      15     178 .. 0.96
   2 ?   -3.9   0.4      0.97   8.7e+03      42      58 ..     183     199 ..     181     201 .. 0.55

  Alignments for each domain:
  == domain 1  score: 126.9 bits;  conditional E-value: 6.5e-41
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
        Snf7   2 airsLrkaerkldkkqeslekkikkleaelkklakkgnkdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqgakamkamnkk 100
                 ai++++++++kl+++q++++    ++++ +k++  kg+k++all+L++kk++e++l+++d+ql +le+   ++e++ ++k+v+ +++qg+k+++a++ +
  KHJ31980.1  16 AILDMKNQRDKLHQYQRRITVLTDREKSIAKEMLTKGEKAKALLALRRKKYQESLLAKTDAQLEQLESLTKSVEFALVQKDVIYGLQQGTKVLQAIHAE 114
                 799************************************************************************************************ PP

                 TC.CHHHHHHHHHHHHHHHHHTCHHHHHHHHHTT-GGTTHHHHHHHHHHHHHHHHHCSH.HHHHHHHTXXXST CS
        Snf7 101 vd.idkidklmdeiedqmekaeeisEalsrslddadeedEeeleaeLdaLeqelgdeelldesvklpevPsee 172
                 +  ++ +dklm e+++++++++eis++l++++   +++dE+e+e+eLdaLe+e++       +v lp vPs++
  KHJ31980.1 115 MGgLEHVDKLMGETAEAIAYQKEISNMLGDQM---TNQDEDEVEDELDALEAEIT-------GVPLPTVPSTR 177
                 *559****************************...99****************54.......67899999986 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 0.97
                 HHHHHHHHHHHHHHHHH CS
        Snf7  42 ralllLKqkkryekqld 58 
                 ra+  L qk + e+ ++
  KHJ31980.1 183 RAKERLLQKQHEEQSIE 199
                 55555666666666555 PP

>> NAM-associated  No apical meristem-associated C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   5.6     0.062   5.6e+02      91     148 ..      42      96 ..       3      98 .. 0.52
   2 ?    8.7   0.1   0.00031       2.7      71     101 ..     171     201 ..     122     202 .] 0.73

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.062
  NAM-associated  91 askdeealeklasaqkkiakkskekkeeaeleekkldieeekveaeqrqaeeeImskD 148
                     +s  +e+l k ++a+  +a ++k+ +e+      k d++ e++e++ +++e ++ +kD
      KHJ31980.1  42 KSIAKEMLTKGEKAKALLALRRKKYQES---LLAKTDAQLEQLESLTKSVEFALVQKD 96 
                     2333334444444444444444444433...334567777778888887777777777 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00031
  NAM-associated  71 sssrlkRPiGkkkaKekrkeaskdeealekl 101
                      +++++R  Gk++aKe+  +++++e+++e l
      KHJ31980.1 171 PTVPSTRLPGKTRAKERLLQKQHEEQSIEML 201
                     457899*************999999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1555  (0.086731); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1453.92
//
Query:       KHJ31981.1  [L=115]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0029   17.6   0.9      0.004   17.2   0.9    1.2  1  Sigma70_r1_1  Sigma-70 factor, region 1.1


Domain annotation for each model (and alignments):
>> Sigma70_r1_1  Sigma-70 factor, region 1.1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.9   2.2e-07     0.004      26      64 ..      12      48 ..      12      66 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2.2e-07
                  HHHGCCSS--HHHHHHHHHHHHCCT-EEE-SS-...... CS
  Sigma70_r1_1 26 ndaLpddeldseqiediiemLedmgIdvveeaededell 64
                  n+ L +d +d ++ie +i++ +d+gI++++e+   d l+
    KHJ31981.1 12 NKGLAPDLIDIDAIESVIKQNDDLGIEIIDEEI--DRLI 48
                  667999************************877..4444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       830  (0.0462937); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 864.78
//
Query:       KHJ31982.1  [L=569]
Description: putative scd2 ral3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-26   91.6   0.0    6.2e-14   51.3   0.0    3.2  3  SH3_1      SH3 domain
    1.4e-15   56.9   0.1    8.5e-08   31.9   0.0    3.4  3  SH3_9      Variant SH3 domain
    2.5e-13   50.0   0.0    6.2e-13   48.7   0.0    1.6  1  PX         PX domain
    3.2e-12   45.9   0.0      4e-09   36.0   0.0    2.8  3  SH3_2      Variant SH3 domain
    4.1e-07   29.8   0.1    8.1e-07   28.9   0.1    1.5  1  PB1        PB1 domain
  ------ inclusion threshold ------
       0.12   12.2   0.0       0.63    9.9   0.0    2.2  2  Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like


Domain annotation for each model (and alignments):
>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   0.0   2.1e-17   6.2e-14       1      47 [.      37      85 ..      37      86 .. 0.94
   2 !   36.6   0.0   8.6e-13   2.6e-09       1      48 []     150     198 ..     150     198 .. 0.97
   3 ?   -2.3   0.0       1.2   3.5e+03      13      29 ..     524     540 ..     522     541 .. 0.79

  Alignments for each domain:
  == domain 1  score: 51.3 bits;  conditional E-value: 2.1e-17
                EESSSBEXSSTTBXEBSTTEEEEEEEECSS.SEEEEEETTS.TEEEEEE CS
       SH3_1  1 iAlYDYeaeesdELsfkkGDviivleksed.gWwkgrlkgt.gkeGliP 47
                +Al+DYea++++ELsf+kGD ++v+ k++d +W+++ +      +Gl+P
  KHJ31982.1 37 RALHDYEAQSPQELSFRKGDFFHVIGKENDmDWYEACNPAVpDARGLVP 85
                7*************************************98788899998 PP

  == domain 2  score: 36.6 bits;  conditional E-value: 8.6e-13
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTS.TEEEEEEG CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgt.gkeGliPs 48 
                 i++YD+  e+ dEL+ k G+ iiv+++s+ +W+ ++ +g+ g  GliP+
  KHJ31982.1 150 IVMYDFVSERVDELDAKAGEAIIVIAQSNPEWFVAKPIGRlGGPGLIPV 198
                 689**************************************99*****5 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 1.2
                 BXEBSTTEEEEEEEECS CS
       SH3_1  13 ELsfkkGDviivlekse 29 
                  L +  G++i+++ k+e
  KHJ31982.1 524 RLKIPTGEIITLSYKDE 540
                 588889****9988776 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.0   2.9e-11   8.5e-08       1      47 [.      38      88 ..      38      90 .. 0.89
   2 !   18.9   0.0   3.3e-07   0.00099       1      49 []     151     202 ..     151     202 .. 0.94
   3 ?    1.8   0.0     0.072   2.1e+02      11      25 ..     523     538 ..     519     545 .. 0.80

  Alignments for each domain:
  == domain 1  score: 31.9 bits;  conditional E-value: 2.9e-11
       SH3_9  1 AlypyepreddeLsLqrGDvitvi.eesedgWlegsl...tGrtGlvPany 47
                Al++ye+++++eLs+++GD++ vi +e + +W+e+ +      +GlvP+++
  KHJ31982.1 38 ALHDYEAQSPQELSFRKGDFFHVIgKENDMDWYEACNpavPDARGLVPVTF 88
                89**********************444568*****98777889*****987 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 3.3e-07
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegs...ltGrtGlvPanyve 49 
                 ++y+++    deL   +G+ i+vi +s++ W+ ++   + G  Gl P++++e
  KHJ31982.1 151 VMYDFVSERVDELDAKAGEAIIVIAQSNPEWFVAKpigRLGGPGLIPVSFIE 202
                 89********************************987779999******997 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.072
       SH3_9  11 deLsLqrGDvitvi.e 25 
                 d L +++G++it++ +
  KHJ31982.1 523 DRLKIPTGEIITLSyK 538
                 7899*********853 PP

>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   0.0   2.1e-16   6.2e-13      17     112 ..     315     414 ..     306     415 .. 0.96

  Alignments for each domain:
  == domain 1  score: 48.7 bits;  conditional E-value: 2.1e-16
                 SSEEEEEEEEEETTSSSEEEEEEEHHHHHHHHHHHHHHHT.........TSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHHTSCHHHH.SHH CS
          PX  17 kkhsyylyevelktgakewtvkRrYsdFeeLhskLlrkfp.........rvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrn.sev 105
                 +  +++++ev+ ++g +++++ R Y+dF++++ +Ll++fp         ++++P +P++v++++     +++++ rr++L++y++ ll +p +++ s++
  KHJ31982.1 315 DNRYWFIVEVHFEDG-RSFELCRFYEDFYDFQIQLLNEFPdaagvkdgdKRTLPFMPGPVSHVT-----DAITQGRRNSLDKYVKDLLIQPSYISrSQM 407
                 6789**********9.**********************************************99.....****************************** PP

                 HHHHHHS CS
          PX 106 lteFLev 112
                 ++eF+ +
  KHJ31982.1 408 VREFFVP 414
                 ****975 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0   0.0   1.3e-12     4e-09       2      50 ..      36      85 ..      35      91 .. 0.82
   2 !    6.9   0.0    0.0017         5       1      55 [.     148     202 ..     148     204 .. 0.74
   3 ?   -3.6   0.0       3.1   9.2e+03      19      32 ..     528     540 ..     523     543 .. 0.73

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 1.3e-12
                EEESS-B-SCGCCB--B-TTEEEEEE..EEEECT.TEEEEEE...CCCEEEEE CS
       SH3_2  2 vraiedyvgedkseLsfkkGdvikvlslgskdsd.gwwegev...gGrvGlfP 50
                +ra+ dy+++++ eLsf+kGd+++v+   +k++d +w+e+ +      +Gl+P
  KHJ31982.1 36 IRALHDYEAQSPQELSFRKGDFFHVI---GKENDmDWYEACNpavPDARGLVP 85
                8*************************...888888***986643335556666 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0017
                 EEEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE.CCCE...EEEEGCGEE CS
       SH3_2   1 yvraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev.gGrv...GlfPsslve 55 
                 y++++ d+v+e  +eL  k+G+ i v+    +++++w  + +  Gr    Gl+P s+ e
  KHJ31982.1 148 YGIVMYDFVSERVDELDAKAGEAIIVI---AQSNPEWFVA-KpIGRLggpGLIPVSFIE 202
                 788999****************99999...7888887333.323333333888877665 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 3.1
                 -TTEEEEEE..EEE CS
       SH3_2  19 kkGdvikvlslgsk 32 
                   G++i +  ++++
  KHJ31982.1 528 PTGEIITLS-YKDE 540
                 579999996.6665 PP

>> PB1  PB1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.1   2.7e-10   8.1e-07       2      68 ..     493     560 ..     492     566 .. 0.93

  Alignments for each domain:
  == domain 1  score: 28.9 bits;  conditional E-value: 2.7e-10
                 EEEEEEETTEEEEEEEEGSSS-HHHHHHHHHHHHTST.CCSEEEEEEETTS.SEEEESSHHHHHHHHHH CS
         PB1   2 vdlKlrygggirrelsvssnisfeeLrakvekrfkls.dedvklkYpdedg.dlVtitsDeDLeealee 68 
                 +++K+++g++    ++v+++i+fe L++k+++r+k++  e ++l+Y+de   +  ++ s +DL+ al+ 
  KHJ31982.1 493 MKVKIYFGDDLIA-IRVPNDIQFERLVEKIRDRLKIPtGEIITLSYKDEASsERPLLLSNNDLDFALSR 560
                 79***********.***********************99***********9999999999999988875 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       1.5   4.5e+03      55      71 ..      45      61 ..      43      61 .. 0.86
   2 ?    9.9   0.0   0.00021      0.63      13      49 ..     504     540 ..     494     543 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.5
                SBGGGSS--TTEEEEEE CS
   Rad60-SLD 55 stvedldiedgdtidvv 71
                + +++l++++gd+++v+
  KHJ31982.1 45 QSPQELSFRKGDFFHVI 61
                6789999*******996 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00021
                 EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTE CS
   Rad60-SLD  13 vkikVkptttvskLieayrkkkgipeeqkvrLiFDGe 49 
                 + i+V ++ +++ L+e+ r++ +ip  + ++L +++e
  KHJ31982.1 504 IAIRVPNDIQFERLVEKIRDRLKIPTGEIITLSYKDE 540
                 6799******************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.47
# Mc/sec: 3670.83
//
Query:       KHJ31983.1  [L=244]
Description: hypothetical protein EV44_g3151 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      251  (0.0139997); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1780.14
//
Query:       KHJ31984.1  [L=448]
Description: hypothetical protein EV44_g3858 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (448 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       722  (0.04027); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3224.08
//
Query:       KHJ31985.1  [L=378]
Description: hypothetical protein EV44_g3850 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.2e-07   29.2   0.0    1.5e-06   28.4   0.0    1.4  1  rve       Integrase core domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.0   8.5e-11   1.5e-06      26     117 ..       8      98 ..       4     100 .. 0.95

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 8.5e-11
         rve  26 llvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpqdnGkvErfhrtlkd 117
                 +l+vvd ++r+  a  l+++++++ + al  + ++ + g  p++ + D  + +ts++f + ++ l i+ + +++ ++++ G+vEr h+ l++
  KHJ31985.1   8 VLHVVDEATRFQSAKWLKNMSSQHIWEALRMCWIDVYLGP-PDISNHDTDTNFTSHEFLQNAKALVIETKIAPVESANSMGIVERYHKPLRR 98 
                 889*****************99999999999999999998.***********************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2977.13
//
Query:       KHJ31986.1  [L=245]
Description: hypothetical protein EV44_g3442 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.055   13.8   0.0       0.14   12.5   0.0    1.8  1  SH3_15    Mind bomb SH3 repeat domain


Domain annotation for each model (and alignments):
>> SH3_15  Mind bomb SH3 repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   7.7e-06      0.14       1      25 [.      83     160 ..      83     202 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 7.7e-06
      SH3_15   1 fevGDwVrvkd.................................................dvekvkklqeghg....g 25 
                 f vGDwV +k+                                                 ++ek kk+q g++    +
  KHJ31986.1  83 FLVGDWVMLKTdhirtlrpckkltekfigpfkviekitnqtyrldlknlvgkihdifhveKLEKSKKIQDGQQeygiE 160
                 67*******************************************************999999999999999944444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1117  (0.0623013); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1786.32
//
Query:       KHJ31987.1  [L=685]
Description: putative atp-dependent rna helicase mak5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.5e-42  144.6   0.4    6.8e-42  143.2   0.4    1.7  1  DEAD         DEAD/DEAH box helicase
    1.9e-28   99.0   0.9      2e-27   95.8   0.0    2.6  3  Helicase_C   Helicase conserved C-terminal domain
    3.5e-06   27.1   0.5    2.5e-05   24.4   0.0    2.3  2  ResIII       Type III restriction enzyme, res subunit
    4.5e-06   27.0   0.5    1.7e-05   25.1   0.1    2.2  2  AAA_22       AAA domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.2   0.4   1.5e-45   6.8e-42       1     174 [.     144     335 ..     144     337 .. 0.87

  Alignments for each domain:
  == domain 1  score: 143.2 bits;  conditional E-value: 1.5e-45
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS.........TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTST..SEEEEEETTSSHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet.........kgktgpkalivePtreLaeqtlnnlkkfkkyid..lrvlliiggvaar 88 
                 t+iQ+ aip+il+g+dv+++a TGsGKTlaf+ip++++ +e+          +++   a++++PtreLa+q+ ++l+ ++++++    +++++gg + +
  KHJ31987.1 144 TPIQSTAIPEILDGHDVIGKASTGSGKTLAFSIPIVESWIESnrdlddqlrVKQKSATAIVLSPTRELAHQITKHLNALCNELSsaPHIVSVTGGLSIQ 242
                 89**************************************99******9985666679***********************966556777899****** PP

                 HHHHHHHTTCSEEEEEHHHHHHHH..HCTSSH.CTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTT......SEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxx..xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxx RF
        DEAD  89 dqlskldngvdivvgtpgrlddll..stgkln.lsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklq......rqvivlSATlpkdvk 174
                 +q++ l +++di+++tpgrl+d l   +++l+ ++ ++flV+DEadrll++g  +++++iln l+      + +      rq++v+SAT++k+++
  KHJ31987.1 243 KQQRLL-SKADIIIATPGRLLDTLnsCQQTLEaTRLIKFLVIDEADRLLSDGHFKEMEEILNLLDPSGRPDE-SeniitsRQTLVFSATFQKTLQ 335
                 ******.***************9965355566355569**************************64443333.256888899********98765 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.15   6.8e+02      10      62 ..     193     251 ..     185     258 .. 0.66
   2 ?   -2.7   0.0       1.7   7.6e+03      16      35 ..     320     339 ..     309     354 .. 0.69
   3 !   95.8   0.0   4.4e-31     2e-27       1     110 [.     393     503 ..     393     504 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.15
                 HHHTTTTSEEEEEESSHHHHHH.HHHH....HHHT...TSTEEEESTTSTHHHHHHHHHHH CS
  Helicase_C  10 lkleeeggkilifvntidrlek.vkll....lekk...gikvavlhgelpqnereeileqf 62 
                 l  +++  ++++ ++t++ +++ +k l    +  +   + +++ ++g l+ +++++ l++ 
  KHJ31987.1 193 LRVKQKSATAIVLSPTRELAHQiTKHLnalcN--ElssAPHIVSVTGGLSIQKQQRLLSKA 251
                 55567788889999999966545344433222..134578888899999999998888876 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.7
                 TSEEEEEESSHH.HHHHHHHH CS
  Helicase_C  16 ggkilifvntid.rlekvkll 35 
                  +++l+f+ t + +l+  kl+
  KHJ31987.1 320 SRQTLVFSATFQkTLQ-QKLI 339
                 5788999988874443.3444 PP

  == domain 3  score: 95.8 bits;  conditional E-value: 4.4e-31
                 HHHHHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH..TTSSSEEEESGGGTSSSTSTTESEEEESSSSSSH CS
  Helicase_C   1 dkleallellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn..kgesdvLiatdvaerGidipkvnlVinfdlprnv 97 
                 +k ++l+++l l+  ++++lif+n+i ++ +++ ll++ g+ + +lh+++ q+ r +++e+f   k +  +Liatdva+rG+di++v+lV++++lpr  
  KHJ31987.1 393 EKDLYLYAIL-LHYPNKRTLIFTNSIHSVRRLTPLLQNLGLDAQALHSQMAQKARMRAIERFSssKPTNPILIATDVAARGLDIKDVQLVVHYHLPRAA 490
                 58899****9.9***************997755556777***********************97445555***************************** PP

                 HHHHHHHTTSSST CS
  Helicase_C  98 tsyiqriGRtgRa 110
                 + y++r+GRt+R 
  KHJ31987.1 491 DIYVHRSGRTARQ 503
                 ************6 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2      0.18   8.3e+02      55     118 ..      26      89 ..      18     112 .. 0.63
   2 !   24.4   0.0   5.5e-09   2.5e-05      26     170 ..     159     331 ..     140     332 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.18
                 .-EEEEESSHHHHHHHHHHGGGGTGG.......GEEEESSS-B--.......-SEEEEEHHHHHHTH CS
      ResIII  55 ekflflvprkslleqtleefkkflseayke...igkkvsgdkkkakekdstnkkilvttiqsldads 118
                  +fl ++ ++++ +   +ef+ f++++++e    g+   + ++++   +++ +k  v++++s + + 
  KHJ31987.1  26 GNFLKFITSTAIKKVSDDEFSGFSDDNKNEnldLGNQAPKSRDIP---KEHGNKRNVSKVESKNLKD 89 
                 478888888899999999999999998877554333333333333...5555555555555544444 PP

  == domain 2  score: 24.4 bits;  conditional E-value: 5.5e-09
                 EEEEEESTTSTHHHHH.HHHHHHH-S................-EEEEESSHHHHHHHHHHGGGGTGG......GEEEESSS-B--........-SEEEE CS
      ResIII  26 rglikmaTGtGKTlva.aklierllkkgkee...........kflflvprkslleqtleefkkflseayke..igkkvsgdkkka.kekdstnkkilvt 109
                  ++ k+ TG+GKTl   + ++e+  ++++              +++l p+++l  q  ++++ + +e  ++  i  +v+g   ++ +++  ++++i+++
  KHJ31987.1 159 DVIGKASTGSGKTLAFsIPIVESWIESNRDLddqlrvkqksaTAIVLSPTRELAHQITKHLNALCNELSSAphI-VSVTGGLSIQkQQRLLSKADIIIA 256
                 5667899*******9989999999998665599*************************9998888887666743.444444444436667899****** PP

                 EHHHHHHTH........HHHTTT.-SEEEEETGGGTTS....TTTHHHHHT---.............SEEEEEESS-S CS
      ResIII 110 tiqsldadseeeeeeseellrdr.fdviiiDEaHrlgak...kswreilekfke.............avllglTATpe 170
                 t  +l   +   ++ +++l+ +r +++++iDEa rl ++   k+++eil+ +++                l ++AT++
  KHJ31987.1 257 TPGRLLDTL---NSCQQTLEATRlIKFLVIDEADRLLSDghfKEMEEILNLLDPsgrpdeseniitsRQTLVFSATFQ 331
                 ******999...55555554444155************9777799999887766566666666666677788888875 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.1   3.8e-09   1.7e-05      14     118 ..     166     307 ..     163     347 .. 0.80
   2 ?   -2.6   0.0       1.3   5.9e+03      60      88 ..     426     456 ..     414     473 .. 0.50

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 3.8e-09
      AAA_22  14 sGtGKTtllr..rlleqldeeakaee.erpevvfvtlpsstsskdllrellralglelka...............................erlsseel 78 
                 +G+GKT+      + ++ +   + ++  r+++ + t+ +++  ++l++++ + l+  +++                                ++++ + 
  KHJ31987.1 166 TGSGKTLAFSipIVESWIESNRDLDDqLRVKQKSATAIVLSPTRELAHQITKHLNALCNElssaphivsvtgglsiqkqqrllskadiiiaTPGRLLDT 264
                 788888754411566666554444447677777888888889999999999999999999999***************************999****** PP

      AAA_22  79 lealeqalraravielliiDEaqhlr...seealeeLrsllnl 118
                 l+ ++q l+a++ i++l+iDEa++l    + + +ee+ +ll++
  KHJ31987.1 265 LNSCQQTLEATRLIKFLVIDEADRLLsdgHFKEMEEILNLLDP 307
                 ************************5534447777777777775 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.3
      AAA_22  60 llralglelka.erlsseell.ealeqalra 88 
                 ll++lgl++ a   +  +  + +a+e+ +++
  KHJ31987.1 426 LLQNLGLDAQAlHSQMAQKARmRAIERFSSS 456
                 4555554444432222222222344444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (685 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       763  (0.0425568); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.24s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 5019.77
//
Query:       KHJ31988.1  [L=163]
Description: hypothetical protein EV44_g3784 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1317.87
//
Query:       KHJ31989.1  [L=349]
Description: hypothetical protein EV44_g0304 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.088   12.5   0.2        7.9    6.2   0.1    2.3  2  zf-Tim10_DDP  Tim10/DDP family zinc finger


Domain annotation for each model (and alignments):
>> zf-Tim10_DDP  Tim10/DDP family zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0    0.0023        41       8      27 ..     107     126 ..     101     137 .. 0.91
   2 ?    6.2   0.1   0.00044       7.9      12      39 ..     222     252 ..     220     267 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0023
  zf-Tim10_DDP   8 qvanaqelvnkltekCfkkC 27 
                   q+a++ ++v+++++  f kC
    KHJ31989.1 107 QMAQIVDIVSQMNNGFFIKC 126
                   99****************** PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.00044
  zf-Tim10_DDP  12 aqelvnkltekCfkkCi...gkypgssLdss 39 
                   +++++ kl  k f kC    ++ p++sLd++
    KHJ31989.1 222 IKDVIAKLMHKDFMKCAsttKDPPDNSLDRN 252
                   67999************6544449***9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 2790.87
//
Query:       KHJ31990.1  [L=690]
Description: putative phd-finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-08   35.1   1.4    0.00031   21.3   0.0    3.1  3  ING           Inhibitor of growth proteins N-terminal histone
    1.7e-06   27.8   7.4    3.5e-06   26.8   7.4    1.6  1  PHD           PHD-finger
  ------ inclusion threshold ------
      0.063   12.8   2.6       0.13   11.8   2.6    1.5  1  PHD_2         PHD-finger
      0.091   12.9   0.6       0.26   11.5   0.6    1.8  1  zf-HC5HC2H_2  PHD-zinc-finger like domain
       0.15   12.3   2.0       0.42   10.9   2.0    1.9  1  zf-HC5HC2H    PHD-like zinc-binding domain


Domain annotation for each model (and alignments):
>> ING  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   8.7e-08   0.00031       3      63 ..      62     123 ..      60     134 .. 0.74
   2 !   11.5   0.0   9.8e-05      0.35      56      98 ..     164     206 ..     153     208 .. 0.86
   3 ?   -2.5   0.6       2.3   8.2e+03      50      78 ..     280     308 ..     246     339 .. 0.61

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 8.7e-08
                 HHHHTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH....TS..S-HHHHHHHHHHHH CS
         ING   3 edyldsvenLPlelqrnltelreiDakvqellkeidskiekfl....kngslqknekeeelsriq 63 
                  ++ d+++++P+el r++t+l+e+Dak+    +e+ + +++ l    +     +++ke +++++q
  KHJ31990.1  62 THFADAISAIPKELIRHFTLLKEVDAKIFIPEEELTRLVNDALnippA---QYSQNKEVKCKNMQ 123
                 6899***********************987777777777777765431...33444444444444 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 9.8e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
         ING  56 eeelsriqeelkeaqelldeKiqlaqqaldlvdkhlrrLdqdl 98 
                 ++ +++   +++ +  +ldeK +++++a++ ++k+l r+d  +
  KHJ31990.1 164 RKLFNQCTMSMQGMLVSLDEKNHVISTAAEALAKQLARIDDCF 206
                 45555777788889999***********************875 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 2.3
                 S-HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         ING  50 lqknekeeelsriqeelkeaqelldeKiq 78 
                  ++n++ + + + ++++k+ + +++ K+ 
  KHJ31990.1 280 RNQNTECDLIDQTESKQKDRKSIGNSKVR 308
                 34444444444555555555555555554 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   7.4   9.8e-10   3.5e-06       1      50 [.     631     678 ..     631     680 .. 0.83

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 9.8e-10
                 SBTTTTSTTSTTSCEEEET..TTSC.EEETTTSSSTHSHHSHHSSTBSSTTTH CS
         PHD   1 rCavCkkksdeeeelvqCd..gCkr.wfHqkClkppleseekpegewlCekCk 50 
                 +C +C++     +e+v Cd  gCkr wfH +C++++  ++   +  w+Ce Ck
  KHJ31990.1 631 YC-ICNN--ISYGEMVACDskGCKReWFHLACVGLKTAPKG--DATWYCEDCK 678
                 69.***9..679******9556*855**********88444..457******8 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   2.6   3.7e-05      0.13       4      36 .]     642     678 ..     640     678 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.7e-05
       PHD_2   4 llsCd..kCsva.VHasCYGvskesdgee.WlCrrCe 36 
                 ++ Cd  +C+   +H +C G+++ ++g+  W+C+ C+
  KHJ31990.1 642 MVACDskGCKREwFHLACVGLKTAPKGDAtWYCEDCK 678
                 67777666765439*************989******5 PP

>> zf-HC5HC2H_2  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.6   7.2e-05      0.26      31      85 ..     604     660 ..     587     675 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 7.2e-05
  zf-HC5HC2H_2  31 pevsfsnvaerepvdvekikkerlkekCllCkkr.kGaciqCskkeCkt.afHvtCa 85 
                   +++ +++  ++++   +++  +  + + ++C++  +G ++ C +k Ck+  fH  C 
    KHJ31990.1 604 QNMDVDDADKKQKSFEDDVDLDVDEPRYCICNNIsYGEMVACDSKGCKReWFHLACV 660
                   455555555555555566666667788899999879***********86269****7 PP

>> zf-HC5HC2H  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.0   0.00012      0.42      39      66 ..     631     660 ..     590     678 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00012
  zf-HC5HC2H  39 CylCkkk.vGaciqCskkkCkk.afHvtCa 66 
                  ++C++  +G ++ C+ k Ck+  fH+ C 
  KHJ31990.1 631 YCICNNIsYGEMVACDSKGCKReWFHLACV 660
                 357776549***********86369****7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (690 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1010  (0.0563333); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.30s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4672.30
//
Query:       KHJ31991.1  [L=565]
Description: hypothetical protein EV44_g2889 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (565 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      263  (0.014669); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 4406.85
//
Query:       KHJ31992.1  [L=114]
Description: hypothetical protein EV44_g3897 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       256  (0.0142785); expected 358.6 (0.02)
Passed bias filter:                      192  (0.0107089); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.21s 00:00:00.55 Elapsed: 00:00:00.35
# Mc/sec: 978.63
//
Query:       KHJ31993.1  [L=270]
Description: putative urease accessory protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1340  (0.0747392); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.21s 00:00:00.64 Elapsed: 00:00:00.36
# Mc/sec: 2271.36
//
Query:       KHJ31994.1  [L=604]
Description: putative kinesin motor domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.9e-112  375.5   0.0     3e-112  374.9   0.0    1.3  1  Kinesin      Kinesin motor domain
      4e-26   91.8   0.0      1e-25   90.4   0.0    1.7  1  Microtub_bd  Microtubule binding
  ------ inclusion threshold ------
       0.39   10.8   7.2        1.8    8.6   0.0    3.4  3  DUF87        Helicase HerA, central domain
       0.59   10.8   0.1       0.59   10.8   0.1    3.8  4  YabA         Initiation control protein YabA


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  374.9   0.0  6.6e-116    3e-112       1     333 []      53     407 ..      53     407 .. 0.94

  Alignments for each domain:
  == domain 1  score: 374.9 bits;  conditional E-value: 6.6e-116
                 EE-SSSHHHHTTTTEBCEEEEC..........TCTCEEEEEEEEECTTSCEEEEESEEEETTS-.......HHHHHHHHHHHHHHHHHTTSEEEEEEEE CS
     Kinesin   1 RvRplnekekeeeeeeevevee..........ekkeeekkskkenkeeeekkfkFdkvfdeeat.......qeevyeetakplvesvleGynatifaYG 82 
                 RvR + ++e e+ +e+ ++++           ++++ +++++k +k  eek f+Fd+ f+++++       q++vy+++ ++++++ +eGy+++ifaYG
  KHJ31994.1  53 RVRGFLPREIERGAECLISMNPinqtttlllpNEADLANTRSKMRKVMEEKIFTFDNSFWSHNKadshyahQSDVYNSLGEEFLDHNFEGYHTCIFAYG 151
                 89999999999999999988778999999998888888999999999**************99999********************************* PP

                 STTSSHHHHHTBCTTTSBSHHHHHHHHHHHHHHHCTTTH.EEEEEEEEEEEEEETTEEEETTSTTTTSTSS.EBEEEECTTSCCEEETTS--EEESSHH CS
     Kinesin  83 qtgsGKTyTmegkeeeeeGiipraleelFesikkekeek.ekefsvkvsylEiYneeiyDLLeskkskkkk.klkiredskkgevyvkgltevevksae 179
                 qtgsGK++Tm+g+ +ee+G+ipr++e+lFe+i++ ++e+ + +++v+vsy+E+Yne+++DLL++++ ++    lkire++++g  y+k+lt   v++++
  KHJ31994.1 152 QTGSGKSFTMMGT-HEEPGLIPRTCEDLFERIEAARQETpNISYHVRVSYFEVYNEHVRDLLTPTQPNQPPyYLKIRESPTEG-PYIKNLTDAPVRNIK 248
                 ************9.999***************98766543899**********************85555469********98.*************** PP

                 HHHHHHHHHHHHHTSTTSSCTSHHCCSEEEEEEEEEEEETTTTTC.EEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
     Kinesin 180 evlellekgeknrkvaetklneeSSRSHavftitleqknlkeete.ekvkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaek 277
                 e+++++++g+ nr+va+tk+n++SSRSHavfti+l+q +++ + + ++ +++++ LvDLAGsEra++t+ a+g rl+E++niNkSL++Lgrvi+aLa++
  KHJ31994.1 249 EIMKYMKMGDGNRTVASTKMNDTSSRSHAVFTIMLKQIHHDMDRDeTTERVARIRLVDLAGSERAKATE-ATGVRLREGSNINKSLTTLGRVIAALADP 346
                 ***************************************9999885569********************.58*************************** PP

                 .......CCTSTSCGGGSHHHHHTGGGHSSSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHCTT CS
     Kinesin 278 .......kkskhipYRdSkLTrlLqdsLgGnsktlmivtvspssenleetlstlkfaerakei 333
                        ++++++pYRdS LT+lL+dsLgGnskt+mi+++ ps  +++etlstl++a++ak+i
  KHJ31994.1 347 kqyrpgkRNRDIVPYRDSILTWLLKDSLGGNSKTAMIACIAPS--DYDETLSTLRYADQAKRI 407
                 ******9999********************************6..99**************97 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.4   0.0   2.3e-29     1e-25      20     149 .]      46     212 ..      37     212 .. 0.84

  Alignments for each domain:
  == domain 1  score: 90.4 bits;  conditional E-value: 2.3e-29
                  TB-EEEEEEECCCS-T......EEEETT..T.......................TTTEEEE-SEEEECTT.......HCCCCCCCC.HHHHHHHHTT- CS
  Microtub_bd  20 GniRvfarvrpelesek.....akikfp..e....................eekkkkkefsFdrvfeses.......eqeevfeei.sqlvqsaldgy 82 
                  GniRv +rvr  l +e      + i+++  +                    ++  ++k f+Fd  f s++       +q++v++ + + +++  ++gy
   KHJ31994.1  46 GNIRVVVRVRGFLPREIergaeCLISMNpiNqtttlllpneadlantrskmRKVMEEKIFTFDNSFWSHNkadshyaHQSDVYNSLgEEFLDHNFEGY 143
                  9************99878898844444433134456666677888889988778999*******997776567777789999998846799******* PP

                  -EEEEEEES................ST-HCHHHHHHHHHHCCTS..CCCCEEEEEEEEEEESS-EEETT CS
  Microtub_bd  83 nvcifaygqTGsGKtyTmegeeeeagmipraveeifetiselke..kgwkyeielqfveiynekvqDlL 149
                  ++cifaygqTGsGK++Tm+g++ee+g ipr+ e +fe i+  ++   +++y++++++ e+yne+v+DlL
   KHJ31994.1 144 HTCIFAYGQTGSGKSFTMMGTHEEPGLIPRTCEDLFERIEAARQetPNISYHVRVSYFEVYNEHVRDLL 212
                  *************************************988654423899*******************8 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0   0.00041       1.8      25      40 ..     144     161 ..     136     162 .. 0.82
   2 ?   -0.0   0.0      0.17   7.7e+02     138     213 ..     239     312 ..     177     325 .. 0.60
   3 ?    2.4   1.8     0.032   1.4e+02      88     173 ..     403     487 ..     377     525 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00041
       DUF87  25 HlAil..gsTGsGKSntv 40 
                 H++i+  g+TGsGKS+t+
  KHJ31994.1 144 HTCIFayGQTGSGKSFTM 161
                 777773379********8 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.17
       DUF87 138 ssdepveklleelk.....kekeelrklknqaiarlldkledllrkggsfsnsstdliallleklekegkitiidlsgvde 213
                  +d+pv +++e +k     ++++++ + k++  ++ ++++  +++k++++     d++++     e+  +i  +dl+g + 
  KHJ31994.1 239 LTDAPVRNIKEIMKymkmgDGNRTVASTKMNDTSSRSHAVFTIMLKQIHH-----DMDRDE--TTERVARIRLVDLAGSER 312
                 45888888999888666655555555555555555555555566655555.....222222..234667777777777555 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.032
       DUF87  88 kelkinpwsldpeelldllee.ddkpaaavqrsvleealdqakakeekeklssdepveklleelkkekeelrklknqaiarlldkle 173
                 +  +i+ +++  ++ ++ +e   + +a a++ ++l+  ++  + ++eke++  ++ vek + ++   ++ ++++k++ +++++++l+
  KHJ31994.1 403 QAKRIRTRAIINQDQISAAERdAQIAAMAEEIRLLQLSISDSR-RKEKEDIEKEDEVEKWQLKVS-DMQRAMEEKDMVQSGKIRSLQ 487
                 4557778888888888888886666667779999999999998.599999999999999998888.444555555555555544443 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   0.00013      0.59      23      91 ..      71     153 ..      61     160 .. 0.72
   2 ?   -2.7   0.0       2.1   9.5e+03      40      55 ..     200     215 ..     174     229 .. 0.63
   3 ?   -1.5   6.7      0.92   4.1e+03      16      53 ..     457     502 ..     415     524 .. 0.62
   4 ?   -2.1   0.2       1.4   6.2e+03      31      43 ..     571     583 ..     541     599 .. 0.53

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00013
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        YabA  23 eleelkeelaelleenaeLeleneklrerl...............eeeekkekekkkelsegkenLarlYeeGFHiCnvlyGsr 91 
                 +++ ++++++ ll ++a+L    +k+r+ +               + +++ +++++   s g+e L + + eG+H C   yG++
  KHJ31994.1  71 SMNPINQTTTLLLPNEADLANTRSKMRKVMeekiftfdnsfwshnKADSHYAHQSDVYNSLGEEFLDHNF-EGYHTCIFAYGQT 153
                 5666777777888888888888899999889999999988887533333444444445555666666665.8**********97 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.1
                 HHHHHHHHHHHHHXXX CS
        YabA  40 eLeleneklrerleee 55 
                  +e+ ne++r++l+ +
  KHJ31994.1 200 YFEVYNEHVRDLLTPT 215
                 3455688888888544 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.92
                 HHHHHHHHHHHHHHHHHH..HHH..HHHHHHHHHHHHHHHH....X CS
        YabA  16 qleelleeleelkeelae..lle..enaeLeleneklrerl....e 53 
                 ++e+ + ++++++++++e  +++  + ++L++ene lr +l    e
  KHJ31994.1 457 EVEKWQLKVSDMQRAMEEkdMVQsgKIRSLQTENEALRLHLrlllE 502
                 3444444444444444321122211456788888888888844431 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHH CS
        YabA  31 laelleenaeLel 43 
                 ++e+  e +eL  
  KHJ31994.1 571 IHETRLEMQELLS 583
                 2222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (604 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1174  (0.0654805); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.24s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 4408.79
//
Query:       KHJ31995.1  [L=601]
Description: putative heterokaryon incompatibility protein het-c protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.9e-228  757.8   0.0   8.7e-228  757.4   0.0    1.0  1  Het-C     Heterokaryon incompatibility protein Het-C


Domain annotation for each model (and alignments):
>> Het-C  Heterokaryon incompatibility protein Het-C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  757.4   0.0  4.9e-232  8.7e-228      72     559 ..      28     533 ..      23     535 .. 0.97

  Alignments for each domain:
  == domain 1  score: 757.4 bits;  conditional E-value: 4.9e-232
       Het-C  72 sqavDvgtlkkvsaetirilvwvlsflafGyateefevteeRLgvYrpeehiDnPkgYadnedareydrrLRgpvdereleidpetGmknYianeeggw 170
                 +qavDvg+lk+vsa ++rilvwvlsfl+fGyat+efevteeRLgvYrpeehiDnPk+Yadn+dar+yd+rLRgpv+e+el+id++tGmknYiane+ggw
  KHJ31995.1  28 AQAVDVGSLKGVSAPSLRILVWVLSFLSFGYATSEFEVTEERLGVYRPEEHIDNPKDYADNKDARQYDQRLRGPVQEVELAIDNNTGMKNYIANESGGW 126
                 7************************************************************************************************** PP

       Het-C 171 atsagyvreslarsielgrlytsgskkkkgkeedllealRllGqalhtleDfaahsnyvelaLrelgekevfphvGkntkiklegkkvyPlvtGtfGgv 269
                 ats+gyv++s++rsi++grlytsg   +kg+e dl+ealR+lGq+lh+leDf ahsnyvelaL+elg+k+vfph+G++tk++++g+++yPlvtGtfG+v
  KHJ31995.1 127 ATSSGYVKFSFTRSIHFGRLYTSGIGDNKGRELDLCEALRCLGQGLHCLEDFGAHSNYVELALIELGYKDVFPHTGSATKMRIRGRHIYPLVTGTFGAV 225
                 *************************************************************************************************** PP

       Het-C 270 DflhsvlGeasDkltqsevdeldaaleeaekss........ssssksalksllsklpgtgddlaeeaeelkakseaqeaena...........sasesk 349
                 DflhsvlGea+D+++q+evde+d  l++ae+ +          s   +++sllsk+pg+g++l++ a++l+++s++q++en            + +++ 
  KHJ31995.1 226 DFLHSVLGEATDHFSQAEVDEMDIVLKNAESGQsgnqrrhsLMSCGGDFISLLSKIPGSGAKLSSAARNLHSASQTQRHENFmrsesqfrayaQDTSEP 324
                 ******************************999788887754456789******************************999989999999886666677 PP

       Het-C 350 anavpgvspnfdpeevakkiypilefrDkvvksiseaiekipglekliekisetltvfvlsllaPfvrPiikqvskelkegsseviessakeqfevfed 448
                    vp+++ +fdp+e+a+kiypilefrDkvvk+i+++i+kipgle+l+ekisetlt f+lsl++P+vrPii+++sk+lk+gss+vie+sak qfe++++
  KHJ31995.1 325 RIGVPNIKSDFDPVETARKIYPILEFRDKVVKAIDKTIAKIPGLESLVEKISETLTLFILSLISPYVRPIIDSASKTLKQGSSAVIEASAKAQFEPWDN 423
                 778999999****************************************************************************************** PP

       Het-C 449 pkctdPthslLskDhfsniLnepaGkvaaaivkyvvprvleawedeevdvdevlddvlevfhhPalrdeeseiqremfetvekWveeksdeeeelkelL 547
                 p ctdPths+L+kDhfsn+Ln++aG+va+ i++y+ pr+l+awe+++++vdev++d+ ++fhhPalrde++e++++mf++v++W+e+++d+++ l+e+L
  KHJ31995.1 424 PVCTDPTHSMLAKDHFSNVLNSVAGQVATVILQYASPRILYAWENPGINVDEVMNDIRRAFHHPALRDESHELHQNMFNVVRNWAESHPDRHK-LNEIL 521
                 ******************************************************************************************998.***** PP

       Het-C 548 ssesvkegknhk 559
                  sesv++g+nh 
  KHJ31995.1 522 GSESVRAGRNHI 533
                 **********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (601 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 4095.91
//
Query:       KHJ31996.1  [L=372]
Description: putative pgap1-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.3e-06   26.1   0.0    9.1e-06   25.3   0.0    1.4  1  DUF676         Putative serine esterase (DUF676)
    6.6e-05   22.7   0.3     0.0001   22.1   0.2    1.5  1  PGAP1          PGAP1-like protein
    0.00077   20.1   0.0    0.00093   19.9   0.0    1.4  1  Abhydrolase_6  Alpha/beta hydrolase family
     0.0033   17.3   0.2     0.0097   15.7   0.0    1.8  2  Abhydrolase_2  Phospholipase/Carboxylesterase
  ------ inclusion threshold ------
      0.014   14.6   0.0      0.022   14.0   0.0    1.4  1  Hydrolase_4    Serine aminopeptidase, S33
      0.057   13.0   0.0       0.16   11.6   0.0    1.6  2  Esterase       Putative esterase
       0.11   12.6   0.4         16    5.7   0.0    2.6  2  TIG            IPT/TIG domain


Domain annotation for each model (and alignments):
>> DUF676  Putative serine esterase (DUF676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   3.5e-09   9.1e-06       3     106 ..       3     122 ..       1     167 [. 0.72

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 3.5e-09
      DUF676   3 kkdhLvVlvHGlqgnsaDlelikeqleki.keklpeekieflmsennesktfkgidvlgerlaeevlevvkkkkdk..........nkkiSfvghSlGg 90 
                 kk+ L+ ++HG++g  + + +  e+l+ i ++    ++i +++    + +t +++++  +   e+vle v + + k            ++ ++ghS+Gg
  KHJ31996.1   3 KKTLLLCFIHGFKGDDSTFGSFPEYLKVIvNN--ALPNINVRALVYPRYETRGDLEECVKEFKEWVLENVIDFEVKngsnsstvdqSVRVILIGHSMGG 99 
                 6777999***************9999997444..44467777777777888888888888888888887766666666777***9988*********** PP

      DUF676  91 liaraaiaklkekem.......t 106
                 ++a+  +  + ++         t
  KHJ31996.1 100 IVATDTVLAIASNCPvnfssaqT 122
                 ****9999877543355544431 PP

>> PGAP1  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.2     4e-08    0.0001      86     109 ..      83     106 ..      10     196 .. 0.86

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 4e-08
       PGAP1  86 sekeptsviliGHSmGGivaraal 109
                 +  +  +viliGHSmGGiva  ++
  KHJ31996.1  83 TVDQSVRVILIGHSMGGIVATDTV 106
                 44566789************7665 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   3.6e-07   0.00093      62     117 ..      76     142 ..      10     246 .. 0.69

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 3.6e-07
                    ...........TTSEEEEEETCHHHHHHHHHHCC..EEEEES-...........----TTTS----TTHHHHHH CS
  Abhydrolase_6  62 a.........gggpvvlvGHSlGGalalaaaplalvvgvlldp..pp.......talpagllaaalelllalla 117
                    +         +  +v+l+GHS+GG++a+          +++++  p+       +++ +++ + ++++++++la
     KHJ31996.1  76 KngsnsstvdQSVRVILIGHSMGGIVATD---TV----LAIASncPVnfssaqtVTDHDAFNPLLFPYVQGVLA 142
                    355555665556689************99...44....333332222333333223333334444444433333 PP

>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   3.8e-06    0.0097      90     126 ..      67     109 ..      55     125 .. 0.86
   2 ?   -3.4   0.1       2.6   6.7e+03      65      76 ..     357     368 ..     345     369 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 3.8e-06
                    HHHHHHHHHHTT......--GGGEEEEEETHHHHHHHHHHHT- CS
  Abhydrolase_2  90 leelidaelkkg......ipssriiigGFSqGaalalylaltl 126
                    le++id e+k+g       +s r+i++G S+G+++a+ ++l+ 
     KHJ31996.1  67 LENVIDFEVKNGsnsstvDQSVRVILIGHSMGGIVATDTVLAI 109
                    7899********99999445669***************99975 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.6
                    -SS-B--SSTTS CS
  Abhydrolase_2  65 aWfdlvglspek 76 
                     W+++ +++ ++
     KHJ31996.1 357 EWYSINTFDTNQ 368
                    6*****999886 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   8.8e-06     0.022      74      96 ..      86     108 ..      67     173 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 8.8e-06
  Hydrolase_4  74 pelplfllGhSmGGliallyllr 96 
                  +  +++l+GhSmGG++a+  +l 
   KHJ31996.1  86 QSVRVILIGHSMGGIVATDTVLA 108
                  45689************998865 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   6.3e-05      0.16      81     144 ..      49     121 ..      27     129 .. 0.72
   2 ?   -1.6   0.0      0.67   1.7e+03     181     232 ..     276     325 ..     199     331 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 6.3e-05
                 TTEEETTCCCCCCHCHHHHTHHHHHHHHHCSEECCC.....EEEEEETHHHHHH....HHHHHCSTTTCCEEE CS
    Esterase  81 fyenategpgaeayetfltqeLlplldanfrtapdg.....ravaGqSmGGlgA....LilalkhpdrFgsvs 144
                 +++++  +++ +++++ + + + ++  +n + +++        ++G+SmGG +A    L +a++ p  F+s+ 
  KHJ31996.1  49 YETRGDLEECVKEFKEWVLENVIDFEVKNGSNSSTVdqsvrVILIGHSMGGIVAtdtvLAIASNCPVNFSSAQ 121
                 555566666666666666666666644444444444466767789*******987777999999999998875 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.67
                 TSEEEEEEEECTTBCCCHTSCHHHHHHHHHHHCCHHHHCCCCCCTT-SCCCC CS
    Esterase 181 lkalriyldvGtseddlgeqlsveilevlarnrelkeqlaargvegedheyd 232
                  +    y + G+++  ++e  s+  +  +++n+e +e ++++ +++ d+e++
  KHJ31996.1 276 IRFGNLYTCLGKKS--VEESISGTRTFCIVPNTENAEFWHKAVNDKADDEVT 325
                 44445555556555..466777777777777777777777777777777766 PP

>> TIG  IPT/TIG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1     0.013        34       9      54 ..      80     124 ..      75     151 .. 0.90
   2 ?    5.7   0.0    0.0061        16      28      72 ..     269     318 ..     210     330 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.013
         TIG   9 nsgsasgGttititGtnFgtnssdssvtiggtpctvtasvssttlv 54 
                 ns+++++  ++++ G+ +g  + + +v+   ++c+v+ ++s +t++
  KHJ31996.1  80 NSSTVDQSVRVILIGHSMGGIVATDTVLAIASNCPVN-FSSAQTVT 124
                 7888999999********999999999999*******.***99985 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0061
         TIG  28 tnssdssvtiggtpctvta.....svssttlvcttPpgpsgllnvsvlvd 72 
                 t  s++++++g+ ++++ +     s+s t   c++P++ ++++  + ++d
  KHJ31996.1 269 TLNSKLNIRFGNLYTCLGKksveeSISGTRTFCIVPNTENAEFWHKAVND 318
                 567899************9999999999999******9988776665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       662  (0.0369234); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2570.03
//
Query:       KHJ31997.1  [L=1905]
Description: putative tfiiic transcription initiation factor complex subunits tfc3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.018   15.4   0.8      0.018   15.4   0.8    2.1  2  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
      0.021   15.6   0.4      0.095   13.6   0.4    2.2  1  zf-C2H2_4    C2H2-type zinc finger
       0.03   14.7   0.4      0.089   13.3   0.4    1.8  1  zf-H2C2_2    Zinc-finger double domain
      0.035   14.4   0.0       0.12   12.8   0.0    1.9  1  PH_TFIIH     TFIIH p62 subunit, N-terminal domain
      0.035   14.6   0.8       0.14   12.7   0.8    2.1  1  zf-C2H2      Zinc finger, C2H2 type
       0.12   12.8   0.7       0.56   10.7   0.7    2.2  1  zf-met       Zinc-finger of C2H2 type


Domain annotation for each model (and alignments):
>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.8   5.9e-06     0.018       2      21 ..     614     633 ..     613     635 .. 0.93
   2 ?   -3.3   0.2       4.1   1.2e+04       8      15 ..     967     974 ..     967     974 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 5.9e-06
                  CBBTTTTBBBSSHHHHHCCT CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHl 21 
                  f C+ C+K Fk++n l+ H+
   KHJ31997.1 614 FKCESCQKRFKNQNGLEYHV 633
                  99***************997 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 4.1
                  TBBBSSHH CS
  zf-C2H2_jaz   8 dKyFksen 15 
                  +K F++en
   KHJ31997.1 967 NKVFNNEN 974
                  79****98 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.4   3.2e-05     0.095       1      21 [.     614     634 ..     614     636 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.2e-05
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlk 21 
                 fkC+ C+k+F+++++L  H+ 
  KHJ31997.1 614 FKCESCQKRFKNQNGLEYHVS 634
                 8******************96 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.4     3e-05     0.089      11      26 .]     610     625 ..     601     625 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3e-05
   zf-H2C2_2  11 gekpyeCplCdkaFkt 26 
                 ++kp++C++C k+Fk+
  KHJ31997.1 610 SQKPFKCESCQKRFKN 625
                 689***********98 PP

>> PH_TFIIH  TFIIH p62 subunit, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.9e-05      0.12       2      79 ..     496     578 ..     495     585 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.9e-05
    PH_TFIIH   2 ykKkdGtLtlte..krleWtp.dasssa.psvsiplseIknlqisp.agsaKvmLklvlkedkseeesytFtFtngsearker 79 
                 yk k G L l+   + le+ p d++  + + +++++s+I+n+ i+  ags+ + L+  +  ++++ + ++F+F ++ +a + +
  KHJ31997.1 496 YKGKAGNLLLSAnkQCLEFLPiDQDCTEdSLFRLEISRIQNHPITSiAGSEPMELRFKAIGQDNTVNVHIFEFSSAVKAIEAA 578
                 89999******9999******9555444499***********998747899*****999977668999*******65555544 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.8   4.6e-05      0.14       1      21 [.     614     634 ..     614     635 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4.6e-05
                 EEETTTTEEESSHHHHHHHHH CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHir 21 
                 +kC+ C k+Fk++  L+ H +
  KHJ31997.1 614 FKCESCQKRFKNQNGLEYHVS 634
                 8******************86 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.7   0.00019      0.56       1      19 [.     614     632 ..     614     634 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00019
      zf-met   1 fyCelCnvtfnsesqlksH 19 
                 f Ce C+++f++++ l+ H
  KHJ31997.1 614 FKCESCQKRFKNQNGLEYH 632
                 78************99999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1905 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1133  (0.0631937); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.99u 0.28s 00:00:01.27 Elapsed: 00:00:00.46
# Mc/sec: 12321.70
//
Query:       KHJ31998.1  [L=335]
Description: putative ef-hand superfamily ca2+-modulated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3189  (0.177868); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                       129  (0.00719505); expected 17.9 (0.001)
Passed Fwd filter:                        42  (0.00234257); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.04u 0.37s 00:00:01.41 Elapsed: 00:00:00.52
# Mc/sec: 1936.36
//
Query:       KHJ31999.1  [L=239]
Description: putative translation initiation factor 4e [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-39  133.4   0.1    7.9e-39  133.0   0.1    1.1  1  IF4E      Eukaryotic initiation factor 4E


Domain annotation for each model (and alignments):
>> IF4E  Eukaryotic initiation factor 4E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.0   0.1   4.4e-43   7.9e-39       1     146 [.      44     195 ..      44     208 .. 0.87

  Alignments for each domain:
  == domain 1  score: 133.0 bits;  conditional E-value: 4.4e-43
                 EEEEEEEEEEE-TTT....--SS-SGGG-EEE.EEEEEHHHHHHHHHHS--GGGB-SSEEEEEEETT--SSTTSHHHHS-EEEEEEE-----HHHHHHH CS
        IF4E   1 pLkskWtlwfdsksk....sksenyeeslkkv.atfstveeFwslynnlkkpsklkvksdyhlFkkgikPmWEdpankkGGkwvirlkkkekldrlWee 94 
                 p ++ W ++fd+++k     ++ +y++sl+++ +++++v++Fw+ ynn ++++++k++++++lFk+g++P+WEd++n +GG+w++r+ k ++  ++W++
  KHJ31999.1  44 PTQHYWNIYFDRQQKdpakASEVSYTASLEQIgSQIESVQDFWR-YNNNTPVEQIKMRESIYLFKQGFRPIWEDRRNINGGSWTFRVPK-SNGPDFWTR 140
                 5799******55555455455556********778*********.7888889***********************************99.66889**** PP

                 HHHHHHTT-SS--....-SEEEEEEEE-SSEEEEEEEES-TT-HHHHHHHHHHHH CS
        IF4E  95 lllaligeqleee...edeicGvvvsvRkkedrisiWtrdasdeekvekigeklk 146
                 + l++ige+l+ +   +d+ cGv +svR +++ isiW+rdas+e+++e+i + + 
  KHJ31999.1 141 VQLMAIGEKLQCClepGDQLCGVGLSVRFNSHLISIWHRDASKEKSIEAILRLVL 195
                 **********9999888************************99999999865544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1725.87
//
Query:       KHJ32000.1  [L=139]
Description: putative 60s ribosomal protein l23 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-33  114.4   0.0    3.8e-33  114.2   0.0    1.0  1  Ribosomal_L14  Ribosomal protein L14p/L23e


Domain annotation for each model (and alignments):
>> Ribosomal_L14  Ribosomal protein L14p/L23e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.2   0.0   2.1e-37   3.8e-33       4     119 ..      21     136 ..      19     139 .] 0.93

  Alignments for each domain:
  == domain 1  score: 114.2 bits;  conditional E-value: 2.1e-37
                    SS-EEE--SSSSBSEEEEEEETT-.....---EE-SSSEEEEEESSS-T...TTSSCEEEEEEEE-SS-EE-TTS-EEEESS-EEEEB-TTS-BSS CS
  Ribosomal_L14   4 lktrlkvaDNsgakevecikvlggk....krkaasvGdiivvsvkkakpkgkvkkgdvvkavvvrtkkevrrkdGsvirfddnaaVllnkkgeplG 95 
                    ++++++++DNsga+++++i+v g +    + +a+ vGd+++++vkk+kp     +++v+ av+vr++k++rr+dG+++ f+dna V++n kge++G
     KHJ32000.1  21 VGAVMNCCDNSGARNLYIISVKGIGarlnRLPAGGVGDMVMATVKKGKP---DLRKKVMPAVIVRQSKPWRRTDGVFLYFEDNAGVIVNPKGEMKG 113
                    6789******************9985453449*****************...89****************************************** PP

                    -.B-SBEEHHHHHH.-HHHHHTBS CS
  Ribosomal_L14  96 trifgpvarelrekkflkivslAp 119
                    + i+gpv +e++e  +++i+s + 
     KHJ32000.1 114 SAITGPVGKEAAEL-WPRIASNSG 136
                    *************9.****99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       202  (0.0112667); expected 358.6 (0.02)
Passed bias filter:                      183  (0.0102069); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 1062.22
//
Query:       KHJ32001.1  [L=132]
Description: hypothetical protein EV44_g3314 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       513  (0.0286129); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1064.53
//
Query:       KHJ32002.1  [L=734]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.4e-11   42.4   0.0    1.4e-10   41.1   0.0    1.8  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase
  ------ inclusion threshold ------
        2.3    7.9   4.4        6.4    6.6   4.4    1.7  1  DNA_RNApol_7kD   DNA directed RNA polymerase, 7 kDa subunit


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.0   1.5e-14   1.4e-10       3     119 .]     551     656 ..     549     656 .. 0.85

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 1.5e-14
  Exo_endo_phos_2   3 iisvYippsdelenlestlekllselkspkiiilGDfNakhplWgsedtdssargeeLiefleehslsllnllksgptfkssngsstiDltlts 96 
                      +++vY  p +      s+++ ll+ ++ +k i +GDfN  h  W+ + + +  +g+e++++ e h++s+l  ++  pt++     +t+Dl +++
       KHJ32002.1 551 FLNVYKAPLN-----PSAVQLLLNWVPPSKAIAIGDFNSAHWVWQPSARCTYGQGDEIEKWAELHNMSCLTIVE--PTHRA---GNTLDLAWSN 634
                      6677777777.....677777888888779***************9777779****************888877..88855...578******9 PP

  Exo_endo_phos_2  97 dnlalskleleeedlgSDHrpil 119
                       +     + + ee ++SDH+pi+
       KHJ32002.1 635 ISGICA-WVDREECVTSDHLPIF 656
                      999999.99999*********95 PP

>> DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   4.4   0.00071       6.4       3      24 ..     351     374 ..     350     379 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.00071
                     -SSS--B--..--SSS----SSS- CS
  DNA_RNApol_7kD   3 CgeCgaevs..lkkgdpiRCkeCG 24 
                     Cg+Cg+ +   +   ++ RCk+CG
      KHJ32002.1 351 CGNCGSTMHseDLCMAQTRCKNCG 374
                     *****998745677899******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (734 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       565  (0.0315132); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 5054.90
//
Query:       KHJ32003.1  [L=749]
Description: putative proton-coupled oligopeptide transporter of the plasma membrane [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.4e-136  454.7  42.6   6.1e-136  454.6  42.6    1.0  1  OPT       OPT oligopeptide transporter protein


Domain annotation for each model (and alignments):
>> OPT  OPT oligopeptide transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  454.6  42.6  3.4e-140  6.1e-136       2     615 ..      45     715 ..      44     716 .. 0.95

  Alignments for each domain:
  == domain 1  score: 454.6 bits;  conditional E-value: 3.4e-140
         OPT   2 lTlRavvlGillgvlgsavnmyfglrtglvsissipaallafplgkalarilpk.....lslnpgpftikEnvliqtmasaaatlalatglivvipale 95 
                 +T+R++++G++l+++gs+++++f +r+++v++s+i++a+++++ g+a++r+lp      ++lnp  f+ kE+ +i++m+ +a+t a+at+++++++++ 
  KHJ32003.1  45 WTFRMFLIGLGLSAFGSTLATIFLFRPQFVTVSVIFLAVISYFAGNAMSRFLPSkgligRWLNPHSFNSKEHIAIVIMSHTASTAAYATEVLAAQKLY- 142
                 9*************************************************************************************************. PP

         OPT  96 lygqsagfgylillslsvqllGvgfagplRkflvypeklifPsglataellkalhkpegeeksrlkfflivflgsfvwglfplylfpalssfswltwia 194
                  y++ ++ + +ill++s+qllG+g+ag+lR  lvyp+k+ +P+ l+   l+++lh  + e k++  ff+i+f+  + w++fp+y++p+l+++s+++ + 
  KHJ32003.1 143 -YDTIPNSLVAILLLISSQLLGYGMAGILRSGLVYPTKMSWPQILPLSSLIETLHRDKIEMKKKAVFFWIIFVLIATWEIFPQYIMPVLTGISVFCLAN 240
                 .*********************************************************999************************************** PP

         OPT 195 pknvvlanlf.......glgllpltfdwnviaayiGsglivplwvavnmliGavlswgiliPllyysngwypaylp..................ydvte 268
                  k+ v++++f       glgll l+fdw++i+     ++  pl +++n +iG ++++g+ i+l yy+n+w+++++p                  y+++e
  KHJ32003.1 241 RKSLVFTKVFggangneGLGLLSLCFDWQYITI---APFFLPLITLFNSFIGNIIGFGLQIGL-YYGNIWNAKSFPflgqqlyarssntthylvYNQSE 335
                 ********************************4...7**************************.*********************************** PP

         OPT 269 ildedgvldyekyigyglmllaalvallylvqfaaitllivhtilkhgkdikaalksa......................rsprteeddrhrrlmrkyk 345
                 ild++  l+ ++    g++++aa+ a ++l+++ +i ++  h +l++ +d++++++                         + +  + d+h+r+m  y+
  KHJ32003.1 336 ILDNKNQLNVTALTVKGTPYFAATHASYLLTTNLSIGAMALHILLWNFDDLRQTFRGLhlpkmksfklnsffkqkreeprTEAELAKLDPHYRQMLVYA 434
                 ********************************************************************999998874443335555567********** PP

         OPT 346 dvpmwwylallvlslvigiivvealftqlpvwglllalllafllaivsaiiaGltglnpvsgigkltqlifgallpgrpvanlvfgavvyaaaaqagdf 444
                 +vp+ wyl +l+ s+ i+++ ++ l+ +lp+wgl+++ +++fl +++++i+aG +g+  +  ++ + q+i g l+pg+pvan++f  ++ ++ aqa ++
  KHJ32003.1 435 EVPSFWYLGILIGSFSIALFSIYSLKSTLPWWGLVVSCIIGFLNTVIISILAGSIGF--GLPTTSVIQMIGGQLFPGKPVANMYFVLFGANTQAQALNL 531
                 *********************************************************..**************************************** PP

         OPT 445 mqDLKtGhllkasPraqfvaqliGtlvgavvniavlkllvkaygdict.adasnaftaPqakvfaavavl.lvggk.........kglpwafllgavap 532
                 +++LK G++ k+sPr ++++q iGt+ ga++n +v++ + ++ +di+  ++++n++++  +++f++ a++ +  +k         + + +a+ lg+ +p
  KHJ32003.1 532 ISSLKFGQYGKLSPRCTLTVQTIGTVFGAIINFFVMSTITTNRRDILLsTQGTNVWSGHAVQSFNSNAIAfGALSKylfgagrryQFVIFALPLGCLIP 630
                 ***********************************************99********************886666689999999555555555****** PP

         OPT 533 filllllkkfpkkstarklplplafa.....vgfylppsl.sialligglianlwlkrrdaewakkynyvlaaGLiaGealmgviiafl 615
                 ++++ l+k++p k   ++l +p++++     +    ++++ ++  + +g++ +l+++ r+++w+ kynyvlaa+++ G+ +m ++++f+
  KHJ32003.1 631 LPFYFLHKRYP-KLGLNYLVTPVICWflgdlT---GGINSsTFMFYSIGFFVQLYIRPRYPKWFMKYNYVLAAAISGGTEFMVFLSTFA 715
                 *********99.9999***9999999764433...4444423355668**************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (749 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.32s 00:00:00.93 Elapsed: 00:00:00.46
# Mc/sec: 4936.50
//
Query:       KHJ32004.1  [L=676]
Description: putative calcium-dependent protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-41  142.8   0.0    3.3e-41  141.4   0.0    1.6  1  Pkinase         Protein kinase domain
    4.5e-28   98.2   0.0      7e-28   97.6   0.0    1.3  1  Pkinase_Tyr     Protein tyrosine kinase
    0.00066   18.6   0.0      0.001   17.9   0.0    1.2  1  Pkinase_fungal  Fungal protein kinase
     0.0061   15.9   0.0       0.02   14.2   0.0    1.9  2  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.033   13.6   0.0      0.061   12.7   0.0    1.3  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
        7.1    6.8   5.6        1.2    9.3   0.2    2.4  2  DUF3847         Protein of unknown function (DUF3847)


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.4   0.0   1.1e-44   3.3e-41       3     260 ..     146     457 ..     144     459 .. 0.87

  Alignments for each domain:
  == domain 1  score: 141.4 bits;  conditional E-value: 1.1e-44
                 EEEEEEEESSEEEEEEEETTTT...EEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE..........SSEEEEEEE--TTEBHHHH CS
     Pkinase   3 kleklGeGsfGkVykaveketg...kivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee..........kdelylvleyveggeladl 88 
                 +++ lG+G+ G+V+ ++++ +g    ++A+K++ + ++    e kvl E+++l+ l+hpn+v + +v+ e              +++++y+++g+l ++
  KHJ32004.1 146 EEKVLGRGGKGVVLLVRHELDGvslGQFACKRVPVGDNHAWLE-KVLVEVQLLQGLSHPNLVSYRHVWLEnvrlnrfgpsVPCAFILQQYCNEGDLLHY 243
                 6899**************9998333589********9999885.9*************************999999987655566999*******8888 PP

                 HH........HHSS--HH.........................HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTE...EEE-SGTTSEESSSS CS
     Pkinase  89 le........rkgslsee.........................eakkiakqilegleylHskgiiHrDlKpeNiLidekge...lKitDFGlakeless 151
                 +          k  ++e+                         e+ +++k i++gl++lH  + iHrDlKp+N L++++g+     i+DFG ++  +  
  KHJ32004.1 244 VVgalpkvknSKERMKEQirksrnqaqlegpefescnrglaleEIYSFFKDIVSGLAHLHGSNYIHRDLKPSNCLLHKEGKeikCLISDFGEVQVENMA 342
                 887887665444446666999999*****************************************************8887855559********9999 PP

                 CSBCTTTSCGGGS-HHHH......TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHH CS
     Pkinase 152 skltsfvgtseYlAPEvl......keneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkl 244
                  k t  +gt  Y+APEvl      +  ++++k+D++slG+ily + +++ p+++ ++ e+ +++++ l + ++     + + +e+ ++++ + dllkkl
  KHJ32004.1 343 RKSTGSTGTISYCAPEVLkqdssgRFGNFTTKSDIFSLGMILYFMCFRRLPYKSADSVEEENEDINLLRAEINAWSGFSDEKRERPDLPNRLYDLLKKL 441
                 99****************76654333789************************88888888888888666566666667788888899*********** PP

                 T-SSGCCSTTHHHHHT CS
     Pkinase 245 lkkdpkkRltaeellq 260
                 l+ dp +R++ +e+l 
  KHJ32004.1 442 LAIDPDERPGTTEILT 457
                 ************9985 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.6   0.0   2.3e-31     7e-28       4     257 ..     147     457 ..     144     459 .. 0.86

  Alignments for each domain:
  == domain 1  score: 97.6 bits;  conditional E-value: 2.3e-31
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSS..........EEEEEE--TTEBHHHH CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeep..........llivteyvkgGdLlkf 91 
                  +k lG+G  G V   + +  +  +  + a K +  + ++   e++l e+++++ l+hpn+v++  v +++ +           +i+ +y+++GdLl++
   KHJ32004.1 147 EKVLGRGGKGVVLLVRHE-LDGVSLGQFACKRVPVGDNHAWLEKVLVEVQLLQGLSHPNLVSYRHVWLENVRlnrfgpsvpcAFILQQYCNEGDLLHY 243
                  6889******99999988.88889999***************************************99555455566788888999************ PP

                  HHHT...............................CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE...TTEEEE-STTTHEETTT CS
  Pkinase_Tyr  92 Lrkk...............................ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse...nkvvkisDfGLardiek 155
                  +                                   ++ l l++++sf  ++ +G+++L+  +++Hrdl   N+Ll++   + ++ isDfG  +    
   KHJ32004.1 244 VVGAlpkvknskermkeqirksrnqaqlegpefesCNRGLALEEIYSFFKDIVSGLAHLHGSNYIHRDLKPSNCLLHKegkEIKCLISDFGEVQV--- 338
                  **999*****************************999***************************************9854345788*****6654... PP

                  SSEEEETTSSTSGGGGS-HHHHHHSE......EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHH.............HHHHHHTTEES-BBTTSBHHH CS
  Pkinase_Tyr 156 ddeyvkkeeaklpvkWmapEslkekk......ftsksDvWsfGvllwEiftlgespypglknee.............vleklkegkrlekpekcpeel 234
                  ++  +k+++++  + ++apE+lk+ +      ft+ksD++s G++l+ ++   + py++ ++ e              +    ++++ e+p+  p++l
   KHJ32004.1 339 ENMARKSTGSTGTISYCAPEVLKQDSsgrfgnFTTKSDIFSLGMILYFMCF-RRLPYKSADSVEeenedinllraeiNAWSGFSDEKRERPD-LPNRL 434
                  5888999999*************999999999***************7765.8899988744433567777755542111223444455555.9**** PP

                  HHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 235 yelmkkcweedpeeRptfselve 257
                  y+l+kk ++ dp+eRp  +e+++
   KHJ32004.1 435 YDLLKKLLAIDPDERPGTTEILT 457
                  ****************9998865 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   3.4e-07     0.001     307     400 ..     287     380 ..     283     388 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 3.4e-07
  Pkinase_fungal 307 ellealrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgee......Hsyrh 395
                     e+ + ++D + g+  L+   +++HrD    N l+   k+ +e k l++D+     ++   +++++   tGT+ + a evlk+ +       +   
      KHJ32004.1 287 EIYSFFKDIVSGLAHLH-GSNYIHRDLKPSNCLLH--KEGKEIKCLISDFGEVQVEN---MARKSTGSTGTISYCAPEVLKQDSsgrfgnFTTKS 375
                     5667799**********.*****************..66778889999996544444...44555679************953223333455556 PP

  Pkinase_fungal 396 DLESf 400
                     D+ S+
      KHJ32004.1 376 DIFSL 380
                     66555 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.62   1.9e+03      10      61 ..     140     189 ..     136     207 .. 0.70
   2 !   14.2   0.0   6.8e-06      0.02     158     258 ..     300     402 ..     293     449 .. 0.70

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.62
  Kinase-like  10 rertlvrgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlke 61 
                  +++ ++  ++l++g+++vv++v+ +   + + + +f  +  +   +   l++
   KHJ32004.1 140 FKKFFIEEKVLGRGGKGVVLLVRHEL--DGVSLGQFACKRVPVGDNHAWLEK 189
                  5677889999***********99887..666667776666665555555555 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 6.8e-06
  Kinase-like 158 anLqakglvhgkftvdnllldekgg...lmlggftaLvrag.tkvvl.sevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPl 250
                  a+L+    +h ++++ n ll+++g+     + +f++      ++    s+   ++  pE+l +       +  ++t k d   lG+  y++  + lP 
   KHJ32004.1 300 AHLHGSNYIHRDLKPSNCLLHKEGKeikCLISDFGEVQVENmARKSTgSTGTISYCAPEVLKQDSS---GRFGNFTTKSDIFSLGMILYFMCFRRLPY 394
                  899******************99963337899*998754331333333666699******999666...57889***********************9 PP

  Kinase-like 251 tlateeak 258
                    a +  +
   KHJ32004.1 395 KSADSVEE 402
                  87654333 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.1e-05     0.061     127     169 ..     295     336 ..     289     346 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.1e-05
         Kdo 127 vgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldka 169
                 +    a lh  +  H+dl + n ll++e+ +e+++ + D+   
  KHJ32004.1 295 IVSGLAHLHGSNYIHRDLKPSNCLLHKEG-KEIKCLISDFGEV 336
                 5566789*********************8.9*****9999655 PP

>> DUF3847  Protein of unknown function (DUF3847)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.2   0.00041       1.2      20      59 ..      10      49 ..       7      59 .. 0.85
   2 ?   -2.0   1.0       1.3   3.9e+03       4      24 ..     250     270 ..     248     272 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00041
     DUF3847 20 ehkekiLenrlkyleRkeRtHrLitrGaalEsilpeakeL 59
                 ++e +L+++ + + R   tH+Li rGa      p   +L
  KHJ32004.1 10 DNREIVLRHKDAIVLRDPQTHQLILRGAKSSTHCPTCHQL 49
                588999**********************876666666655 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.3
     DUF3847   4 eLkaelekaekklrqaehkek 24 
                 + k+ +e+ ++++r+ +++ +
  KHJ32004.1 250 KVKNSKERMKEQIRKSRNQAQ 270
                 567888999999999888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      624  (0.0348039); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.46
# Mc/sec: 4418.58
//
Query:       KHJ32005.1  [L=209]
Description: putative acyl- n-acyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.6e-10   40.1   0.0    4.9e-10   39.7   0.0    1.3  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    3.2e-06   27.1   0.0      5e-06   26.5   0.0    1.2  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
    0.00024   21.0   0.0    0.00038   20.4   0.0    1.3  1  FR47             FR47-like protein
    0.00028   21.2   0.0    0.00042   20.7   0.0    1.3  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
    0.00037   21.2   0.0    0.00045   20.9   0.0    1.2  1  Acetyltransf_3   Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
      0.077   13.1   0.0        0.3   11.2   0.0    1.9  2  Acetyltransf_4   Acetyltransferase (GNAT) domain
       0.11   12.6   0.0       0.19   11.9   0.0    1.4  1  Acetyltransf_CG  GCN5-related N-acetyl-transferase


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7   0.0   1.9e-13   4.9e-10      29     117 .]      86     176 ..      51     176 .. 0.84

  Alignments for each domain:
  == domain 1  score: 39.7 bits;  conditional E-value: 1.9e-13
                     HSTTC.EEEEEEETTEEEEEEEEEEEETTSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHT.TESEEEEEEETTEHHHHHHHHHTTE CS
  Acetyltransf_1  29 sleae.gllvaeedgeliGfisllkipdekggvayieslaVspeyrgkGlGsaLlealeeraree.gikkivlaveedndaairlYeklGF 117
                      ++ +  ++++   g+l Gf+s+ + ++   +v y ++++ s+e rg Gl+++L++ l   a +   ++k++l+++  n++a ++Y+k G+
      KHJ32005.1  86 MRHQDmKYVLVTLRGKLQGFMSFMPSYEDGIPVLYCYEIHLSSELRGTGLARTLMQLLDSVAAKIpTVEKVMLTCFTQNTRAFKFYTKIGY 176
                     23444377778999**************9999*********************************888*********************98 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   1.9e-09     5e-06      23     106 ..      83     176 ..      68     183 .. 0.89

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 1.9e-09
  Acetyltransf_10  23 rerieegealllvaeeggkivGviel.rdgs......hisllfVdpeyrgqGigkaLleaveeeaekdgikl..eltvnasp.yavpfYeklGF 106
                      r++++++++++++++  gk+ G+ +   + +      + + +  ++e rg+G+++ L++ + + a k +  +   lt+  ++  a +fY k+G+
       KHJ32005.1  83 RNEMRHQDMKYVLVTLRGKLQGFMSFmPSYEdgipvlYCYEIHLSSELRGTGLARTLMQLLDSVAAKIPTVEkvMLTCFTQNtRAFKFYTKIGY 176
                      567789******************776555567899999999**********************777665555899******9**********9 PP

>> FR47  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   1.5e-07   0.00038      26      78 ..     123     177 ..     117     182 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 1.5e-07
                 EEEE-GGG-SSSHHHHHHH...HHHHHHHHS-S-EEEEEETT-HHHHHHHHHHT-E CS
        FR47  26 alqvlpehrrrGlgsrlvk...alakeiaergktvllvvvasNtpsirlyeklGfe 78 
                  + +  e r+ Gl++ l +   ++a++i +  ++v+l   ++Nt++ ++y+k+G+ 
  KHJ32005.1 123 EIHLSSELRGTGLARTLMQlldSVAAKIPT-VEKVMLTCFTQNTRAFKFYTKIGYG 177
                 6778899*******9887622255666655.56799999***************95 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   1.6e-07   0.00042      12      74 ..     100     176 ..      88     178 .. 0.65

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.6e-07
                     TEEEEEEEEEEES......TCTEEEEE-GGGTTSSHHHHHHHH......TT...SEEEEEEEEE....THHHHHHHHHHTTE CS
  Acetyltransf_7  12 gkivGfialslld......aeitrlaVdpeyrgkGiGraLlea......ae...kgiileqlel....naekaikfYeklGF 74 
                     gk  Gf++++++        ++ ++  + e rg G++r L+++      ++   ++     + l    ++++a kfY k G+
      KHJ32005.1 100 GKLQGFMSFMPSYedgipvLYCYEIHLSSELRGTGLARTLMQLldsvaaKIptvEK-----VMLtcftQNTRAFKFYTKIGY 176
                     55557777777777666555555588999*************75665431132222.....112233244499********9 PP

>> Acetyltransf_3  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   1.8e-07   0.00045      35     137 ..      68     176 ..      25     177 .. 0.76

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 1.8e-07
  Acetyltransf_3  35 eeaeewlera....waeeseeegygwaivl.kdtgviGsvglrdleeedee..aelgymlapsfwgkGyateavralleyafeelglerlvavid 122
                     +  +  ++ +     ++e +++++ +++v+ +++   G++++ +  e+        ++ l ++ +g G+a+  ++ l  +a + + +e+++ ++ 
      KHJ32005.1  68 DHYKNSITGWnppfKRNEMRHQDMKYVLVTlRGK-LQGFMSFMPSYEDGIPvlYCYEIHLSSELRGTGLARTLMQLLDSVAAKIPTVEKVMLTCF 161
                     4444444433444466777788889888773555.89***99977776544666666777788******************************** PP

  Acetyltransf_3 123 keNeaSirvleklGf 137
                     ++N++ ++ ++k+G+
      KHJ32005.1 162 TQNTRAFKFYTKIGY 176
                     *************96 PP

>> Acetyltransf_4  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       0.5   1.3e+03      24      48 ..      16      38 ..       8      68 .. 0.71
   2 ?   11.2   0.0   0.00012       0.3      89     135 ..     130     177 ..      87     180 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.5
  Acetyltransf_4 24 aitfeyevssveefekflealdsek 48
                    +++ +y  + v e +++++++ + +
      KHJ32005.1 16 EFQSRY-FPPVSEWQTWIHPI-THC 38
                    444444.56777777888776.444 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00012
  Acetyltransf_4  89 nnkeglgrelidaleqvl.keqnienllaeiaspnensiqfhkalGFe 135
                      + +gl+r l+++l  v+ k + +e+ +   + +n+ + +f+ ++G+ 
      KHJ32005.1 130 LRGTGLARTLMQLLDSVAaKIPTVEKVMLTCFTQNTRAFKFYTKIGYG 177
                     56789*************9***************************95 PP

>> Acetyltransf_CG  GCN5-related N-acetyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   7.4e-05      0.19       9      47 ..     100     141 ..      92     160 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.4e-05
  Acetyltransf_CG   9 geevafleYevrkeg...vldfthTeVpeelrGkGiAkkLvk 47 
                      g+  +f+++  + e+   vl  + +  + elrG G+A+ L++
       KHJ32005.1 100 GKLQGFMSFMPSYEDgipVLYCYEIHLSSELRGTGLARTLMQ 141
                      67789998863333336699********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       575  (0.0320709); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1592.82
//
Query:       KHJ32006.1  [L=426]
Description: putative purine nucleoside protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.5e-133  444.9   0.0   1.7e-133  444.7   0.0    1.0  1  NUP       Purine nucleoside permease (NUP)


Domain annotation for each model (and alignments):
>> NUP  Purine nucleoside permease (NUP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  444.7   0.0  9.6e-138  1.7e-133       2     313 .]      47     370 ..      46     370 .. 0.99

  Alignments for each domain:
  == domain 1  score: 444.7 bits;  conditional E-value: 9.6e-138
         NUP   2 vkvvivsmFegEaqawlerlk........laenitvpglsplypevhcnadgsvcqlvtGegeinaaasimaLvlsprFdLtktYfliaGiaGvnPkaa 92 
                 +kvvi+smF++Ea +w+e+ +        l++nit+pglspl+p++hc +dgsvcq++tGe+++naaa++maLv sp Fd++ktYfliaGiaG+nP+++
  KHJ32006.1  47 PKVVIISMFSPEATIWYENANtagsignlLEKNITIPGLSPLFPQLHCLKDGSVCQVTTGESQVNAAATMMALVQSPLFDFRKTYFLIAGIAGINPRYG 145
                 9************************************************************************************************** PP

         NUP  93 tiGsvafaryavqvdlqyeidarelpkdwstgylplgtkepneypkeiygtevfelneaLrdwAvelakkakLkdseeaaayrakY....eyaaAqkpP 187
                 t+++v+f++ya+qvdlqyeid r+lp+++stgy+p+g+k p++yp++iygtevfe+ne+Lrd+A+++a  a+Lkds++a ayra+Y    +ya+A+++P
  KHJ32006.1 146 TLADVVFSKYAIQVDLQYEIDIRDLPSNFSTGYIPQGAKVPDQYPTDIYGTEVFEVNEKLRDIAFNFALAATLKDSPTAPAYRARYspnlAYAPATRNP 244
                 *************************************************************************************************** PP

         NUP 188 svvkcdtltsdtywsGkllseaaenltkllTngtgtycttaqEdnatleallraakaglvDfsRvivlRtasnFdrpppgvsaleslleaeqggfeaal 286
                 sv++cd++tsd+y+sG++l+e +en+t+l+Tng+g yc+taqEdna+le++lraa  + vD+sRvi++Rtas+Fdrp+pg++a+++l++ ++g feaa+
  KHJ32006.1 245 SVIRCDVATSDVYFSGTRLGESVENTTRLFTNGSGIYCMTAQEDNAILEVILRAALRNIVDYSRVIIMRTASDFDRPYPGQTATDNLFYLPAGCFEAAI 343
                 *************************************************************************************************** PP

         NUP 287 enlylaGsevveeivknWestykkgvk 313
                 +n+ylaG++v+++i++ W++ + +gv+
  KHJ32006.1 344 SNIYLAGTPVIQGILRGWQQIFDQGVP 370
                 **********************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.37
# Mc/sec: 3478.58
//
Query:       KHJ32007.1  [L=1357]
Description: putative cytosolic regulator pianissimo [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.3e-133  445.6   7.3   2.1e-133  444.9   3.6    2.8  3  RICTOR_N    Rapamycin-insensitive companion of mTOR, N-term
    2.9e-40  137.0   0.2    2.6e-36  124.3   0.0    4.0  3  RasGEF_N_2  Rapamycin-insensitive companion of mTOR RasGEF_N 
    3.7e-38  129.5   2.5    4.7e-36  122.7   0.1    4.3  4  RICTOR_M    Rapamycin-insensitive companion of mTOR, middle d
    2.9e-30  104.3   0.2    2.6e-28   98.1   0.1    3.6  3  RICTOR_V    Rapamycin-insensitive companion of mTOR, domain 5
    5.2e-14   52.1   9.6    1.9e-13   50.3   9.6    2.0  1  HR1         Hr1 repeat
  ------ inclusion threshold ------
       0.13   12.0   2.0        0.3   10.9   2.0    1.5  1  DUF724      Protein of unknown function (DUF724)
       0.21   11.7   3.2        0.6   10.3   3.2    1.7  1  Uds1        Up-regulated During Septation


Domain annotation for each model (and alignments):
>> RICTOR_N  Rapamycin-insensitive companion of mTOR, N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  444.9   3.6  8.2e-137  2.1e-133       1     373 []     251     611 ..     251     611 .. 0.94
   2 ?    0.5   0.1     0.089   2.3e+02     200     249 ..     754     801 ..     625     808 .. 0.65
   3 ?   -2.1   0.0      0.55   1.4e+03      30      63 ..     933     966 ..     922     970 .. 0.67

  Alignments for each domain:
  == domain 1  score: 444.9 bits;  conditional E-value: 8.2e-137
    RICTOR_N   1 vekandLvkllkrhpelkydlsleellkriqfmLldeskevraagyRilRylisdseslklllklkldiliirSLekdsksevEReqALkLirafleik 99 
                 v++an+Lv+l+kr+p lk+dl +  ++ ++q+mLl+es+ev+aa+yR++Ry+isd  sl+++++lk+d+l++ SL k++k++vEReqALk+ir+fl++k
  KHJ32007.1 251 VSHANNLVELFKRYPALKHDLAWPVFGLKMQMMLLSESREVVAAAYRMIRYAISDVMSLRRIKSLKIDFLVVLSLTKERKADVEREQALKFIRSFLDVK 349
                 789************************************************************************************************ PP

    RICTOR_N 100 kgakelsksvvralvavaehedDrlrricletLaElllldpelvveagGlrvllnalldgsselaesllvallylLdspetrkylrkgldleillspft 198
                 +g+ke+s++++ra+ +vaeh++Drl++ c+etLaE++++dp l+v+agGlr l++al +g++e++esl++a+l lLdsp++rkylr+g+++e l+++ft
  KHJ32007.1 350 DGVKEISRAIIRAIASVAEHTEDRLKSLCIETLAEIMVRDPGLLVAAGGLRPLADALGEGTYEASESLTAAFLFLLDSPQRRKYLRSGYEIEALFTVFT 448
                 *************************************************************************************************** PP

    RICTOR_N 199 dslekekkkesneeklqnsakaisslLksWsGlialsmnnfrplksLvsaLripslevrkaildllfdllrikppewsesflagrrltt..r.ansksq 294
                 dsl       ++e  l++++kais +LksW+Gl++lsm+nfr+l+sL+s+L +p++ +r++++d++f+llrikpp w +sflagrrltt  r a ++  
  KHJ32007.1 449 DSLL------AKEALLKQNSKAISYALKSWPGLMTLSMYNFRALRSLISCLVLPNSFIRDTVIDMIFSLLRIKPPFWATSFLAGRRLTTygRvATMR-- 539
                 *666......78889**************************************************************************66422222.. PP

    RICTOR_N 295 kkqeeneaeesaelkkkeserkrenlvdhylallllvlieaglleaLvevieeesdsslsrkatlLlgellklanrlLP 373
                 ++++++++         e+e   +++vdhy+alll+v+i +gll+ L++vi+++++s l+rk+tlL+ge+lkla++lLP
  KHJ32007.1 540 ASSQRSVQ-------APEEELCDKSFVDHYTALLLAVFISSGLLQGLLQVIRDTDNSILKRKTTLLIGEVLKLASNLLP 611
                 22222222.......22222234569****************************************************9 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.089
    RICTOR_N 200 slekekkkesneeklqnsakaisslLksWsGlialsmnnfrplksLvsaL 249
                 + ++ k++ s+++ ++  + ++ +lL + +G+ +ls n+   l++L ++L
  KHJ32007.1 754 KFSDMKNNRSSHKYIKVGCALMNTLLQTTEGVKYLSDNK--LLRQLAECL 801
                 333344455555567777778889999999999999666..677777776 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.55
    RICTOR_N  30 iqfmLldeskevraagyRilRylisdseslklll 63 
                 + + L+d++ ev a++ +il  +++ +++l++++
  KHJ32007.1 933 LVTQLYDPEIEVCATAVKILEEACNHKSDLEYIV 966
                 3455777777777777777777777777777666 PP

>> RasGEF_N_2  Rapamycin-insensitive companion of mTOR RasGEF_N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.13   3.4e+02      11      50 ..     282     323 ..     274     374 .. 0.73
   2 !    5.8   0.0    0.0069        18      31      81 ..     733     796 ..     727     799 .. 0.66
   3 !  124.3   0.0     1e-39   2.6e-36       3     106 ..     926    1029 ..     925    1031 .. 0.98

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.13
  RasGEF_N_2  11 vnqLydqsrevvaaaleiLeeacddkeslevlvelkpsl...q 50 
                 +  L  +srevvaaa +++  a++d  sl+ + +lk ++    
  KHJ32007.1 282 MM-LLSESREVVAAAYRMIRYAISDVMSLRRIKSLKIDFlvvL 323
                 43.45899**************999999999988887664551 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0069
  RasGEF_N_2  31 eacddkeslevlvelkpsl..............qhlgeigslLllkllstssGfkylqelnfvee 81 
                 ea++  + ++ l+++   +              ++  ++g  L+ +ll+t++G+kyl++++ +++
  KHJ32007.1 733 EAIKASKFIKRLMNFYRPFkykfsdmknnrsshKY-IKVGCALMNTLLQTTEGVKYLSDNKLLRQ 796
                 55555555555555444333445555555553233.47899****************99987765 PP

  == domain 3  score: 124.3 bits;  conditional E-value: 1e-39
  RasGEF_N_2    3 ekWgiellvnqLydqsrevvaaaleiLeeacddkeslevlvelkpslqhlgeigslLllkllstssGfkylqelnfveeeldkWiekkneeYvklvE 99  
                  +kW+i+llv+qLyd++ ev+a+a++iLeeac++k+ le++ve++p+l+hlgeig++Lll++lsts G++yl+ l+++++e+d+W+  +n++Yv l+E
  KHJ32007.1  926 SKWAIQLLVTQLYDPEIEVCATAVKILEEACNHKSDLEYIVECRPALDHLGEIGAPLLLRFLSTSIGYHYLDGLDYISNEMDDWFLGRNNTYVGLIE 1022
                  69*********************************************************************************************** PP

  RasGEF_N_2  100 ealaeal 106 
                  + la+a+
  KHJ32007.1 1023 ASLARAF 1029
                  ****998 PP

>> RICTOR_M  Rapamycin-insensitive companion of mTOR, middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       0.6   1.5e+03      26      51 ..     774     799 ..     760     805 .. 0.80
   2 !  122.7   0.1   1.8e-39   4.7e-36       2     102 ..     809     909 ..     808     911 .. 0.98
   3 ?   -0.6   0.0      0.43   1.1e+03      29      59 ..    1064    1095 ..    1060    1104 .. 0.77
   4 ?    2.3   0.0     0.055   1.4e+02      23      44 ..    1149    1170 ..    1142    1183 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.6
    RICTOR_M  26 fiGvlsssknGlklLekwkiftllyk 51 
                 +  +l ++ +G+k L++ k+   l +
  KHJ32007.1 774 LMNTLLQTTEGVKYLSDNKLLRQLAE 799
                 5678999*********9999887765 PP

  == domain 2  score: 122.7 bits;  conditional E-value: 1.8e-39
    RICTOR_M   2 gvsagepllskerleetlsrgYfkfiGvlsssknGlklLekwkiftllyklvelksrddllklilssldysvdghiRiilskaLtnssekiRlyatkhL 100
                 g +a+ p++skerl+etl++gYf+++G ++s+ nGl++L++w++ +++y++++lk+r+dl+ l+ls++dys+ gh+R++lskaLt++s++iR+yat+ L
  KHJ32007.1 809 GLTAQTPMFSKERLQETLCSGYFAILGAMTSDTNGLQMLDRWRMMNMMYHIIDLKERSDLIRLVLSNFDYSLPGHPRVLLSKALTAGSKEIRIYATNIL 907
                 778999********************************************************************************************* PP

    RICTOR_M 101 rk 102
                 rk
  KHJ32007.1 908 RK 909
                 98 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.43
    RICTOR_M   29 vlsssknGlklLekwkiftllyklvelks.rd 59  
                   l+++ +G klL + + f+ + + + +   + 
  KHJ32007.1 1064 ELTRTVEGCKLLHDKGHFDEFASTIREYGmHY 1095
                  6899************9999988877666555 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.055
    RICTOR_M   23 YfkfiGvlsssknGlklLekwk 44  
                   f  +G++s+s +Gl++L++++
  KHJ32007.1 1149 AFFVLGLISRSIHGLEILSEHG 1170
                  57789*************9953 PP

>> RICTOR_V  Rapamycin-insensitive companion of mTOR, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.5   3.9e+03      16      40 ..     781     805 ..     778     808 .. 0.84
   2 ?    1.5   0.0      0.14   3.6e+02       9      41 ..     833     868 ..     829     871 .. 0.77
   3 !   98.1   0.1     1e-31   2.6e-28       1      71 []    1102    1172 ..    1102    1172 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.5
    RICTOR_V  16 selGielldeydivedivelaeesp 40 
                 +++G+++l++++++ +++e   +++
  KHJ32007.1 781 TTEGVKYLSDNKLLRQLAECLAQCD 805
                 6789999999999999999888876 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.14
    RICTOR_V   9 aiGhigsselGiellde...ydivedivelaeespv 41 
                 ++G + s ++G+++ld    ++++ +i++l e+s+ 
  KHJ32007.1 833 ILGAMTSDTNGLQMLDRwrmMNMMYHIIDLKERSDL 868
                 589999999999999995545888888888887765 PP

  == domain 3  score: 98.1 bits;  conditional E-value: 1e-31
    RICTOR_V    1 lklKaaLWaiGhigsselGielldeydivedivelaeespvlslRGtafyvLglissteegaeiLdelgWe 71  
                  lk+K++LWa+G++gs+elG+++l+++d+v++i+++ae+++++s+RGtaf+vLglis++ +g eiL+e+gW+
  KHJ32007.1 1102 LKVKGCLWAVGNVGSMELGAPFLEKSDVVQNIIKIAESHEIMSMRGTAFFVLGLISRSIHGLEILSEHGWD 1172
                  589*******************************************************************6 PP

>> HR1  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3   9.6   7.3e-17   1.9e-13       2      64 ..     123     186 ..     122     189 .. 0.95

  Alignments for each domain:
  == domain 1  score: 50.3 bits;  conditional E-value: 7.3e-17
         HR1   2 leelekklekElkireGAenllralesk.ktqnkkvrqeaeselsesnskielLreqLeelqas 64 
                 l++l+  l++Elki+eG en+l+al++k ++q k++r ++e+el++sn ki++L+ q++  q+s
  KHJ32007.1 123 LSSLKESLNRELKIKEGSENMLEALNNKkAKQTKEQRLRVEAELNSSNLKIKELKNQISGFQRS 186
                 789*************************9*****************************988875 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.0   0.00012       0.3      88     148 ..     124     182 ..      96     239 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00012
      DUF724  88 kalqsrlnkLlslkdeqtklleerkklekkieeeesekrkleeeidelekkilelerqlal 148
                  +l++ ln+ l++k+  +++le++++  kk ++ ++++ ++e+e++  + ki+el++q   
  KHJ32007.1 124 SSLKESLNRELKIKEGSENMLEALNN--KKAKQTKEQRLRVEAELNSSNLKIKELKNQISG 182
                 467788899***************99..6666667777889***************99765 PP

>> Uds1  Up-regulated During Septation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.2   0.00024       0.6      24     109 ..     109     184 ..     102     190 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00024
        Uds1  24 eelkkelkaLeer.lealrkkLaletklrdaarsLsrlyssskksakssaarsnskssreslakaeeelaeserkvdelaselekle 109
                 e++ +++ ++ ++ l++l++ L+ e k++++ +++ ++  ++kk           k+++e+ ++ e+el++s+ k++el++++   +
  KHJ32007.1 109 EKIERNVGSIPDHvLSSLKESLNRELKIKEGSENMLEAL-NNKKA----------KQTKEQRLRVEAELNSSNLKIKELKNQISGFQ 184
                 5555555555444157899*************9988877.33333..........3567899*******************997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       980  (0.05466); expected 358.6 (0.02)
Passed bias filter:                      631  (0.0351944); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.90u 0.28s 00:00:01.18 Elapsed: 00:00:00.42
# Mc/sec: 9699.44
//
Query:       KHJ32008.1  [L=835]
Description: putative mitochondrial inner membrane aaa protease yta12 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-68  230.2   0.2    3.9e-68  229.1   0.0    1.6  2  Peptidase_M41  Peptidase family M41
    1.3e-42  145.4   0.0    5.1e-42  143.4   0.0    2.1  1  AAA            ATPase family associated with various cellular
    5.4e-13   48.5   0.0    1.5e-12   47.1   0.0    1.8  1  AAA_lid_3      AAA+ lid domain
    8.6e-09   35.7   0.2    8.6e-09   35.7   0.2    2.1  2  FtsH_ext       FtsH Extracellular
     0.0004   20.4   0.0      0.002   18.1   0.0    2.3  1  AAA_5          AAA domain (dynein-related subfamily)
     0.0012   19.3   0.2      0.081   13.3   0.1    3.1  3  AAA_16         AAA ATPase domain
     0.0021   18.3   0.5       0.81   10.0   0.1    3.8  4  AAA_22         AAA domain
     0.0096   16.1   0.1      0.051   13.7   0.0    2.2  2  AAA_2          AAA domain (Cdc48 subfamily)
  ------ inclusion threshold ------
       0.01   15.6   0.0       0.03   14.1   0.0    1.8  1  RuvB_N         Holliday junction DNA helicase RuvB P-loop dom
      0.012   15.4   0.5        1.3    8.9   0.3    2.8  2  DUF3368        Domain of unknown function (DUF3368)
      0.015   14.5   0.1      0.029   13.6   0.1    1.4  1  TIP49          TIP49 P-loop domain
      0.084   12.6   0.0        0.2   11.3   0.0    1.6  1  IstB_IS21      IstB-like ATP binding protein
       0.14   12.7   0.4       0.34   11.5   0.4    1.7  1  JHD            Jumonji helical domain
       0.65   10.1   5.8         10    6.3   0.3    2.6  2  NYD-SP28       Sperm tail


Domain annotation for each model (and alignments):
>> Peptidase_M41  Peptidase family M41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       4.7   6.1e+03     136     157 ..      91     112 ..      57     136 .. 0.61
   2 !  229.1   0.0     3e-71   3.9e-68       3     190 ..     616     796 ..     614     797 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 4.7
                    S-HHHHHHHHHHHHHHHHHHHH CS
  Peptidase_M41 136 lseetaeeideevkelveeaye 157
                    +    ++ i ee+kel+ee  +
     KHJ32008.1  91 FNAMKKKGIPEEMKELLEELRQ 112
                    3334445566666666666544 PP

  == domain 2  score: 229.1 bits;  conditional E-value: 3e-71
                    --HHHHHHHHHHHHHHHHHHCCSSS-S-B--EES--TTS.-----------TSS--BHHHHHHHHHHHHHHHHHHHHHHHS-BGGGHHHHHHHHHH CS
  Peptidase_M41   3 isekekklvAyHEaGHalvglllkeadpveKvtiiPRgq.alGltlslPeedklsltkeellarlavllGGraaEelifgevttGasnDlekatki 97 
                    +   ekk+vAyHEaGHa++g++lk adp+ Kv+iiPRgq alG++++lP++d++ ++ ++l++r+a++lGGr++Eel+f++vt+Gas+D++k+t++
     KHJ32008.1 616 LLPDEKKVVAYHEAGHAICGWYLKYADPLLKVSIIPRGQgALGYAQYLPNSDNYLMNVNQLMDRMAMTLGGRISEELHFDTVTSGASDDFNKVTRL 711
                    55789******************************************************************************************* PP

                    HHHHHHTS---TTT-S--------..----.------SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEE-HHHHHH CS
  Peptidase_M41  98 arkmvtefGmsdklGpvsleeeeeeevflgkelkkekelseetaeeideevkelveeayerakeileekreelealaeaLlekEtldaeeiee 190
                    a++mvt++Gms+klG++++e+++++        + +k+++e+ta++id+ev+++++eay++++++l+ek++e+  +ae+Ll+kE++d++++ +
     KHJ32008.1 712 ATAMVTKWGMSKKLGTLHFEDNSDT--------SFQKPFAESTAQIIDSEVRRIIDEAYKKCRDLLTEKKDEIGIVAEELLSKEVMDRNDMVR 796
                    ********************98884........4579****************************************************9976 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.4   0.0     4e-45   5.1e-42       2     131 ..     398     531 ..     397     532 .. 0.97

  Alignments for each domain:
  == domain 1  score: 143.4 bits;  conditional E-value: 4e-45
                 EEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH.....TTCCCHHHHHHHHHHHHHHHH CS
         AAA   2 llyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr.....sgseseeeervvnqLlteldg 95 
                 +l+GppGtGKTllaka a e++v+f+++sgse+++++vg +++++r+lf+ea+++  p+i+fiDEida++ksr      g+ ++e+e ++nq+lte+dg
  KHJ32008.1 398 ILSGPPGTGKTLLAKATAGESQVPFFSVSGSEFVEMFVGVGASRVRDLFAEARKNT-PCIIFIDEIDAIGKSRgevgsFGGGNDEREATLNQILTEMDG 495
                 79****************************************************98.******************9988899***************** PP

                 TTTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  96 vkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 ++++e+ v+v++ tnrpd ld+al+r gRfdr+i i+
  KHJ32008.1 496 FNTSEQ-VVVLAGTNRPDVLDKALMRpGRFDRHIAID 531
                 ***866.**************************9885 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.0   1.2e-15   1.5e-12       6      44 ..     561     599 ..     552     600 .. 0.91

  Alignments for each domain:
  == domain 1  score: 47.1 bits;  conditional E-value: 1.2e-15
   AAA_lid_3   6 eLAerTeGySGADlaalcreAallAlrrgikeitmedfe 44 
                 +L ++T+G+SGAD+a+ c+eAal A r + k+++m +fe
  KHJ32008.1 561 RLSALTPGFSGADIANCCNEAALIAARTSVKSVEMIHFE 599
                 5889**********************************8 PP

>> FtsH_ext  FtsH Extracellular
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.2       9.1   1.2e+04      62      83 ..       7      26 ..       3      51 .. 0.62
   2 !   35.7   0.2   6.7e-12   8.6e-09       8     107 ..     195     294 ..     190     296 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 9.1
    FtsH_ext 62 tgdgvsttkkgnstttystptl 83
                +++++ ++k+++s+ +  +p +
  KHJ32008.1  7 KNNVEEKNKTSKSSGS--SPVP 26
                5555555555555444..3333 PP

  == domain 2  score: 35.7 bits;  conditional E-value: 6.7e-12
    FtsH_ext   8 allllllllslfggsgtgstkeisyseFl.edleqgnvekvvvqestis..alirrptgdgvsttkkgnstttystptlgsvesleekLeealkskgvd 103
                  +++ +l++       ++s+++i+y+eFl + l +g vek +v ++      l+r +t +   ++  +n+    +++++gsves+e++L+ea+ ++g+ 
  KHJ32008.1 195 SAFVSYLIYKS--VIPGESSRNITYQEFLsTFLVKGLVEKLTVTNGGKVrvDLHREATQAQYPDSPASNPNFH-YYFSIGSVESFERRLDEAQDQLGIP 290
                 33333444433..77888**************************77777755555555555555555555554.7899999*****************9 PP

    FtsH_ext 104 vess 107
                 v+ +
  KHJ32008.1 291 VSER 294
                 9876 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   1.6e-06     0.002       3     134 ..     398     518 ..     396     521 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 1.6e-06
                 EEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG--..HHHHHHHHHHHHSSEEE.. CS
       AAA_5   3 lLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEverae..sevlnsLlslleerrllle 97 
                 +L GppGtgK+ la+  a   + +++ v ++++ +    +g  ++           l  +ar  +++i+++DE++ +   +  ++s+    +er+  l+
  KHJ32008.1 398 ILSGPPGTGKTLLAKATAGESQVPFFSVSGSEFVEMFVGVGASRV---------RDLFAEARknTPCIIFIDEIDAIGksRGEVGSFGGGNDEREATLN 487
                 89******************************8865555555555.........55555666689**********998333357777788888888888 PP

                 -SSSEEE---......-EEEEEESS--.-TT-TTHHH CS
       AAA_5  98 eggelvkaknddllerfrviatanpldrslnelspal 134
                 +  ++++  n+   e++ v+a +n++d     l++al
  KHJ32008.1 488 QILTEMDGFNT--SEQVVVLAGTNRPD----VLDKAL 518
                 88888777664..46688888888887....555554 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       6.1   7.8e+03      59      86 ..     210     234 ..     199     284 .. 0.69
   2 !   13.3   0.1   6.3e-05     0.081      16      45 ..     386     415 ..     384     431 .. 0.86
   3 ?    1.8   0.0      0.21   2.7e+02     123     147 ..     442     465 ..     424     490 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 6.1
      AAA_16  59 kcdqlesaipysalaqalareellrqll 86 
                 +  ++   i+y+ +++++  ++l+++l 
  KHJ32008.1 210 ESSRN---ITYQEFLSTFLVKGLVEKLT 234
                 44444...99999999997777777664 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 6.3e-05
      AAA_16  16 lervrsgrpelvllsGesGvGKsslvrell 45 
                 +er+ +  p+  +lsG++G+GK+ l+++ +
  KHJ32008.1 386 FERLGAKIPRGAILSGPPGTGKTLLAKATA 415
                 77888888999**************98765 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.21
      AAA_16 123 lkrllallsrderplvlvlDdlqwa 147
                 +++l+a +++   p ++++D+++ +
  KHJ32008.1 442 VRDLFAEARK-NTPCIIFIDEIDAI 465
                 4555566667.889*******9965 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.6   3.3e+03      39      70 ..     113     144 ..      83     162 .. 0.69
   2 ?   -0.5   0.0       1.1   1.4e+03      12      36 ..     338     362 ..     336     386 .. 0.77
   3 !   10.0   0.1   0.00063      0.81       9      26 ..     398     415 ..     394     433 .. 0.85
   4 ?    2.9   0.0     0.093   1.2e+02      82     130 ..     442     508 ..     435     512 .. 0.66

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.6
      AAA_22  39 rpevvfvtlpsstsskdllrellralglelka 70 
                 r++   + l++ ++ ++l++++ + +++++k+
  KHJ32008.1 113 RDTGKPISLANAMKFAKLATDIIKMTDSPTKT 144
                 34444667777777888888888888887777 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.1
      AAA_22  12 GesGtGKTtllrrlleqldeeakae 36 
                 G  G+GKT+  r  +e+++++++a+
  KHJ32008.1 338 GVFGIGKTRAKRFNHETDVKVKFAD 362
                 678******9998888877766654 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00063
      AAA_22   9 vvtGesGtGKTtllrrll 26 
                 ++ G++GtGKT+l++  +
  KHJ32008.1 398 ILSGPPGTGKTLLAKATA 415
                 799***********9765 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.093
      AAA_22  82 leqalrarav..ielliiDEaqhlr..s.............eealeeLrsllnl.srkgvqliLvGt 130
                 +++ + ++++  + ++ iDE++ +   +             e+ l+++ + ++  +++   ++L+Gt
  KHJ32008.1 442 VRDLFAEARKntPCIIFIDEIDAIGksRgevgsfgggnderEATLNQILTEMDGfNTSEQVVVLAGT 508
                 555555555566789********97751455567777766666666664444434577777777777 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.2       2.1   2.7e+03      25      45 ..      88     108 ..      45     142 .. 0.59
   2 !   13.7   0.0     4e-05     0.051       7      83 ..     398     468 ..     395     493 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.1
                 HHTT-....-EEEEEGGG--- CS
       AAA_2  25 ellfvkkekkliradaselle 45 
                 e  f   +kk i  +++elle
  KHJ32008.1  88 ENAFNAMKKKGIPEEMKELLE 108
                 222223344444444444444 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 4e-05
                 EEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS..EEEEETGGG---- CS
       AAA_2   7 lllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpk 83 
                 +l gp g+Gkt+laka+a   +v    ++  +  se+ e   +   v    +   +  ++++    i+++DEid i ++
  KHJ32008.1 398 ILSGPPGTGKTLLAKATAGESQV----PFFSVSGSEFVE---MFVGVGASRVRDLFAEARKN-TpcIIFIDEIDAIGKS 468
                 5789*****************98....************...44444444444444433333.236********99983 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.3e-05      0.03      37      99 ..     398     468 ..     390     473 .. 0.67

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.3e-05
      RuvB_N  37 llyGpPGlGkttlakiiakelgvklkitsgPvl.ek.....agdlaalltnleekd..vlfideihrlsra 99 
                 +l+GpPG Gkt lak  a e +v + + sg    e      a+ +  l+++ +++   ++fidei  + ++
  KHJ32008.1 398 ILSGPPGTGKTLLAKATAGESQVPFFSVSGSEFvEMfvgvgASRVRDLFAEARKNTpcIIFIDEIDAIGKS 468
                 79**********************99999875313311111222233333333332338899999877665 PP

>> DUF3368  Domain of unknown function (DUF3368)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.3     0.001       1.3      11      30 ..      94     113 ..      93     114 .. 0.90
   2 ?    3.4   0.0     0.052        66      16      38 ..     669     692 ..     666     693 .. 0.89

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.001
     DUF3368  11 AKqrGlIpsvkplldaLiqa 30 
                 +K++G+ +++k+ll++L+q 
  KHJ32008.1  94 MKKKGIPEEMKELLEELRQR 113
                 69***************885 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.052
     DUF3368  16 lIpsvkplldaL.iqaGfrispkl 38 
                 ++ +v++l+d++    G ris++l
  KHJ32008.1 669 YLMNVNQLMDRMaMTLGGRISEEL 692
                 67789*****************97 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   2.3e-05     0.029      51      89 ..     395     431 ..     388     438 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.3e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevy 89 
                 r+ +l+Gp+gtGkt la a + e  ++vpf ++sgse+ 
  KHJ32008.1 395 RGAILSGPPGTGKTLLAKATAGE--SQVPFFSVSGSEFV 431
                 78899*************99987..67*********975 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00016       0.2      49      71 ..     396     418 ..     344     467 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00016
   IstB_IS21  49 nivllGpsGvGKshlaialgvea 71 
                 + +l Gp+G+GK+ la a + e 
  KHJ32008.1 396 GAILSGPPGTGKTLLAKATAGES 418
                 4589*************988665 PP

>> JHD  Jumonji helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.4   0.00026      0.34      36      96 ..      51     110 ..      48     116 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00026
         JHD  36 krlleklkelneegkraaeylvkgakalltalkewt.kkeavaekeeeipetikpskLikdl 96 
                 k+lle ++e+++ ++++ ++l++ +k+ ++++++   ++  +a k++ ipe++k  +L+++l
  KHJ32008.1  51 KHLLEGMTEMSDLDEKTIQQLIDNMKINMPKFQREIiENAFNAMKKKGIPEEMK--ELLEEL 110
                 78******************************9887355556788899**9986..566666 PP

>> NYD-SP28  Sperm tail
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.9     0.013        16      34      64 ..      83     113 ..      45     115 .. 0.87
   2 ?    6.3   0.3    0.0079        10      41      87 ..     741     787 ..     730     796 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.013
    NYD-SP28  34 kfeeinekWreilrknkpqeLrkeleeqkqa 64 
                 + e i++ ++ +++k +p+e+++ lee++q+
  KHJ32008.1  83 QREIIENAFNAMKKKGIPEEMKELLEELRQR 113
                 456699999********************96 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0079
    NYD-SP28  41 kWreilrknkpqeLrkeleeqkqaceelideKdklikelqeeLkekd 87 
                  ++e  ++ +  e r+ ++e  ++c +l+ eK++ i  + eeL  k+
  KHJ32008.1 741 PFAESTAQIIDSEVRRIIDEAYKKCRDLLTEKKDEIGIVAEELLSKE 787
                 567888999999******************************99988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (835 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1211  (0.0675442); expected 358.6 (0.02)
Passed bias filter:                      753  (0.041999); expected 358.6 (0.02)
Passed Vit filter:                        97  (0.00541023); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.77u 0.32s 00:00:01.09 Elapsed: 00:00:00.44
# Mc/sec: 5713.28
//
Query:       KHJ32009.1  [L=163]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1265  (0.0705561); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1189.34
//
Query:       KHJ32010.1  [L=441]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       730  (0.0407162); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3416.14
//
Query:       KHJ32011.1  [L=1209]
Description: hypothetical protein EV44_g4514 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.9e-09   36.1   1.0    3.9e-09   36.1   1.0    2.2  2  zf-C3H1       Putative zinc-finger domain
  ------ inclusion threshold ------
      0.095   12.4   0.5       0.26   10.9   0.5    1.7  1  CaKB          Calcium-activated potassium channel, beta subun
       0.11   12.6   3.9      0.079   13.1   1.1    2.3  2  ArnB_C        Archaellum regulatory network B, C-terminal dom


Domain annotation for each model (and alignments):
>> zf-C3H1  Putative zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   1.0   6.5e-13   3.9e-09       1      22 []    1113    1134 ..    1113    1134 .. 0.98
   2 ?    0.3   0.1       0.1   6.1e+02       2       9 ..    1149    1156 ..    1149    1157 .. 0.90

  Alignments for each domain:
  == domain 1  score: 36.1 bits;  conditional E-value: 6.5e-13
     zf-C3H1    1 LCpyElaGGvCnDpsCefQHFr 22  
                  +C++E aGG+CnD  C  QHF+
  KHJ32011.1 1113 FCRFEMAGGICNDSACTLQHFK 1134
                  8********************7 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.1
     zf-C3H1    2 CpyElaGG 9   
                  Cp E++G+
  KHJ32011.1 1149 CPDEFTGE 1156
                  *******6 PP

>> CaKB  Calcium-activated potassium channel, beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.5   4.4e-05      0.26      39     136 ..      57     156 ..      53     171 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 4.4e-05
        CaKB  39 svwteeanCtvlkveileevvdcsfscgsdcrgvskypcLqv...lvnlsssgkkalLhhdeetvelnskCfYiPkcqkdkkeleeevenikeklkkqk 134
                 s w++++n  +l+  + e+ ++ s + + +  +++ yp   +   +vn+ + +     +  ++ +++n    ++Pk+q++ +e++++v+nik +++k++
  KHJ32011.1  57 SRWNQDTNLPLLSNPQNEQ-MHGSCQVHDHQDNTQLYPSHSIpnyFVNIPNRNAINSVEIIDSGLQRNFSNIHVPKNQSEISEVNNHVQNIKANIEKKE 154
                 6788888888888888888.666777777778888888776544499************************************************9995 PP

        CaKB 135 eq 136
                 + 
  KHJ32011.1 155 SI 156
                 54 PP

>> ArnB_C  Archaellum regulatory network B, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.1   1.3e-05     0.079      24      74 ..     315     364 ..     306     370 .. 0.80
   2 ?   -3.8   0.1       2.4   1.4e+04      63      75 ..     481     493 ..     475     494 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.3e-05
                 -HHHHHHHHHHHHHHHHHHT-HHHHHHHTT--S-HHH.......HHHHHHH CS
      ArnB_C  24 nlkeATrilqeleeiAeqTrrieliEaTrrLsrdlesteklskedlSEvtr 74 
                 +l+  T+  ++l   A  T+r + iE+ ++L++d+ + ++ + ++  ++ r
  KHJ32011.1 315 QLEPITKDKSNLSASAAPTKRSDVIEKEKQLQSDMAE-RHKTLQTKMDALR 364
                 567779999**************************99.5555455445555 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2.4
                 .....HHHHHHHH CS
      ArnB_C  63 klskedlSEvtrk 75 
                 +++k ++S vt++
  KHJ32011.1 481 ETTKTTASPVTKT 493
                 3567777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1654  (0.0922528); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.82u 0.25s 00:00:01.06 Elapsed: 00:00:00.43
# Mc/sec: 8461.23
//
Query:       KHJ32012.1  [L=2399]
Description: putative myosin type ii heavy chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.9e-270  898.9   2.7   1.9e-270  898.9   2.7    2.3  2  Myosin_head    Myosin head (motor domain)
    2.5e-13   49.6   0.1    6.5e-13   48.3   0.1    1.8  1  Myosin_N       Myosin N-terminal SH3-like domain
    1.7e-10   39.5  74.8    5.6e-10   37.7  50.5    7.5  5  Myosin_tail_1  Myosin tail
  ------ inclusion threshold ------
      0.019   14.5   0.1      0.055   13.0   0.1    1.7  1  AAA_7          P-loop containing dynein motor region
      0.036   14.3   0.0      0.036   14.3   0.0    6.3  8  AAA_22         AAA domain
      0.063   13.3   0.0        0.2   11.6   0.0    1.9  1  TsaE           Threonylcarbamoyl adenosine biosynthesis prote
        1.2    9.5   0.0        1.2    9.5   0.0    3.1  3  AAA_19         AAA domain


Domain annotation for each model (and alignments):
>> Myosin_head  Myosin head (motor domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  898.9   2.7  7.5e-274  1.9e-270       2     677 .]     166     844 ..     165     844 .. 0.96
   2 ?   -3.9   4.0       1.1   2.8e+03     489     573 ..    1932    2025 ..    1884    2031 .. 0.65

  Alignments for each domain:
  == domain 1  score: 898.9 bits;  conditional E-value: 7.5e-274
                  SBGCGSSS-SHHHHHHHHHHHHHTT--EEEETTEEEEE--SS--STSSHHHHHHHTTS-GGGSSSSHHHHHHHHHHHHHHHTSEEEEEEESSTTSSHH CS
  Myosin_head   2 edlveLsllneasvlenlkkRykkdliYtysglvlvavnPykklkiysedvikaykgkkreelpPHifaiadeayrslledkenqsilisGEsGAGKt 99 
                  +d++eL++lneasv++nl++Ry++dliYtysgl+lvavnPy +l+iys++ i++yk ++ree +PHi+aiadea+r+l+e+k+nqsil++GEsGAGKt
   KHJ32012.1 166 DDMAELTHLNEASVVHNLHMRYQADLIYTYSGLFLVAVNPYCTLPIYSNEYINMYKMHEREETKPHIYAIADEAFRNLVEEKQNQSILVTGESGAGKT 263
                  8************************************************************************************************* PP

                  HHHHHHHHHHHHHSSSSSC.....TCTTHHHHHHHHHHHHHHHHHEEEESSETTEESSEEEEEEEEETTSSEEEEEEEEECE-GGGGT---TT--SBH CS
  Myosin_head 100 eatKkvlqylasvaeskek.....veeeeleekilqsnPilEafGnAktvrndnssRFGKfieiefdakgkiagakietYLLEksRvvkqakeERnyH 192
                  e+tKk++qyla+va s++      +++++l+++il +nPilEafGnA+tvrn+nssRFGKfi+ief ++g+i+ga+i +YLLEksRvv+ +++ERnyH
   KHJ32012.1 264 ENTKKIIQYLAAVAYSESPvknkiQQQSNLSQQILRANPILEAFGNAQTVRNNNSSRFGKFIRIEFTKNGTIVGASIDWYLLEKSRVVRLNAQERNYH 361
                  **************99988888888899********************************************************************** PP

                  HHHHHHHCSTHHHHHHTT--..TCCGSTTTTTTSSSSBTTS-HHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHCTSSEEEEC.TTSSEEESSHH CS
  Myosin_head 193 iFYqllagaseeekkelkle..dvkdyaylsqsgeltvdgiddseefketkkaldilglseeeqkeifrivaailhlGniefkkea.kdeqavledee 287
                  iFYqll ga+++++++l l+  dv+d++y+++ g+ +++g++d++e++++ +a++i+g+see+q+++++++aa+lhlGni+++ e+ +++qa l++++
   KHJ32012.1 362 IFYQLLRGADRKLRQALFLDdlDVEDFTYTNN-GHDKISGVSDQDEWRNLIEAFHIMGFSEEDQNSMLKTIAAVLHLGNITIEIESrTTDQARLTSHS 458
                  ********************8899*******9.9**********************************************998554166778666666 PP

                  H..HHHHHHHHTS-HHHHHHHHHSEEEEETTEEEEEE-BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS..-S-SEEEEEEEEE-B---SSB- CS
  Myosin_head 288 k..lekaaellgvdaeelekalvkrriktgkevvskalnveqaevardalakaiyerlFdwlverinkslekkk..eekksfiGvLDiaGFEifekns 381
                  +  +e++++llg+++e + k l+++r+k+g+e+v k ++ eq++ a+dalak iyer F+ lv++in++l++++   ++++fiGvLDiaGFEifekns
   KHJ32012.1 459 RiyAENVCNLLGISVEPFMKGLLHPRVKAGREWVEKVQTPEQVRLAIDALAKGIYERGFSDLVNQINRQLDQTAigIDESHFIGVLDIAGFEIFEKNS 556
                  5569*********************************************************************9777999****************** PP

                  HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTSSGCGS-GGGCCHHHHHHHHS.SSTSHHHHHHHHHTSTTS-HHHHHHHHHHHH.TTSTTEEETTS CS
  Myosin_head 382 FEqlcinyvnEkLqqlFnelvlklEqeeYvrEgiewkfidfgldnqaiidLiek.kplGilslLdeecllpkatdetfleklvkaf.skhakfeksrl 477
                  FEqlciny+nEkLqq+Fn+++++lEqeeY+rE+iewkfidfg d+q++idLie  +p+Gi+s Lde+c++pkatd++f+ekl++ +  k++k++ s+l
   KHJ32012.1 557 FEQLCINYTNEKLQQFFNHHMFVLEQEEYAREQIEWKFIDFGHDLQPTIDLIELpNPIGIFSCLDEDCVMPKATDKSFTEKLHSLWdRKTPKYRPSKL 654
                  *****************************************************999******************************777779977764 PP

                  TTTTTEEEEEETTCEEEEE-TTHHHHHH----HHHHHHHHTSSSHHHHHHCCSHCHB--.........CSSSECCCCCSBHHHHHHHHHHHHHHHHCT CS
  Myosin_head 478 kkgeakFiikHyAgkveYevegfleKnkDtlnedlvellksskkkllaelfkeeekeakaeakksekkkkkkkkkkkfktvgskfkeslaeLmktles 575
                      + F+++HyA +veY++eg+l+KnkD+ln+++++ll ss++   a+lf + +     + ++++ +++++ kk  f+tv++++ke+l++Lm++l+s
   KHJ32012.1 655 ---GQGFTLTHYAADVEYSTEGWLKKNKDPLNDNVTRLLASSNDRRTASLFMDCS-----DIDDEQIASRSRVKKGLFRTVAQRHKEQLSSLMAQLNS 744
                  ...889***********************************************44.....5677788888999999********************** PP

                  SEEEEEEEE-SSSS--TT---HHHHHHHHHHTTHHHHHHHHHHSSSEEEEHHHHHHHHGGGSTTSS-SS.SSSHHHHHHHHHHHTTS-GCGEEECSSE CS
  Myosin_head 576 tnphfvRCikpnekkkakkldeslvleqlrclGvlegirirraGfpnRitfeefvqrYkllakkelkkllkedakkaveailkeleldkeeykiGktK 673
                  t+phfvRCi+pn kk++k++++ lvl+qlrc+Gvlegiri+r GfpnR  f+ef+qrY++l+++   +    + ++av+ +l++l+ldk  +++G tK
   KHJ32012.1 745 THPHFVRCIIPNLKKRPKQFSAPLVLDQLRCNGVLEGIRIARTGFPNRLFFSEFRQRYEVLCRNMP-RG-YLEGQSAVTLMLEKLKLDKALFRVGLTK 840
                  **************************************************************9985.55.478999********************** PP

                  EEET CS
  Myosin_head 674 iFfr 677
                  +Ffr
   KHJ32012.1 841 VFFR 844
                  ***8 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 1.1
                   TTCEEEEE-TTHH..HHHH----HHHHHHHHTSSSHHHHHHCCSHCH........B--.........CSSSECCCCCSBHHHHHHHHHHHHHHHH CS
  Myosin_head  489 yAgkveYevegfl..eKnkDtlnedlvellksskkkllaelfkeeek........eakaeakksekkkkkkkkkkkfktvgskfkeslaeLmktl 573 
                    A++ e ++++ l   K +D++ e+l +  ++s+++ l++l+ + e         +++ e  +++++++ ++k+++++ + +k++ + a+L ++l
   KHJ32012.1 1932 QAKEAEDTCAEILaeRKQMDAIIEELQRQ-NQSNEEKLEDLYTDLEAavqarkrlQHELEDYRNQRAMEIEDKETSMEQTRKKYQAEFATLTNEL 2025
                   45555555555552248899999887665.66777889999999998887766554444455555666666666666667777777777777766 PP

>> Myosin_N  Myosin N-terminal SH3-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.3   0.1   2.5e-16   6.5e-13       1      39 [.     111     150 ..     111     151 .. 0.94

  Alignments for each domain:
  == domain 1  score: 48.3 bits;  conditional E-value: 2.5e-16
                 SEEEEETTSTTS-EEEEEE.EEESSEEEEEETTSEEEEEE CS
    Myosin_N   1 KklVWVpDpkegyvkGeIk.eeeGdkvtVetedGktvtVk 39 
                 K++VW +D k ++vkG+I+ e e+d++ V++edG+++ V+
  KHJ32012.1 111 KRYVWLKDHKLAFVKGWIVeELEDDQLLVQCEDGSQRVVN 150
                 9******************7777799************97 PP

>> Myosin_tail_1  Myosin tail
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.6  35.6       2.6   6.7e+03       2     174 ..     922    1094 ..     921    1102 .. 0.83
   2 !    9.5  30.2   7.2e-05      0.18     129     288 ..    1109    1268 ..    1105    1283 .. 0.79
   3 ?  -13.9  60.4         7   1.8e+04      25     298 ..    1275    1554 ..    1272    1566 .. 0.72
   4 !   18.1  16.3   1.9e-07   0.00049     445     591 ..    1712    1858 ..    1694    1866 .. 0.89
   5 !   37.7  50.5   2.2e-13   5.6e-10     813    1079 ..    2073    2346 ..    2065    2348 .. 0.93

  Alignments for each domain:
  == domain 1  score: -5.6 bits;  conditional E-value: 2.6
  Myosin_tail_1    2 RqeeelqakeeeLkkvkekqqkaekelkelekkqqqlleeklaLqeqLqaetelfaeaeemRaRLaarkqeleeilhdleaRleeeeeraqqlq 95  
                     R   e+++++e +k + e+ ++   + + l++  +  l e + +q+ L++e  l  + ee+  RL+ r  el+e l       e  ee+  ++ 
     KHJ32012.1  922 RTCSEVKKRDEMIKIMGERLKQDSLDRQRLDEDRRNALIEMQKIQHTLESERSLALDKEEIFKRLQIREAELNEKLAGALDDQEKLEEQLDNIL 1015
                     6666788888888888888888888889998888888888999999**************************9988876666677777888888 PP

  Myosin_tail_1   96 sekkkmqqniqdleeqldeeeaaRqkLqlekvtleaklkkleed.ilvledqnnklskekklleeRiaeltsnlaeeeek 174 
                       k+  ++++++l ++l++      kL  ek  l  kl +l+e+ i + e q ++ + e kll e i+ l+s+l+  + k
     KHJ32012.1 1016 DAKRTAENQVEKLCAELEQAGHLISKLEQEKKQLTEKLLRLDEQyIKLTESQSQRDANESKLLHE-ISILKSQLSLKDRK 1094
                     899999999**********99999******99999999999988245667788888899999987.77788877765555 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 7.2e-05
  Myosin_tail_1  129 leaklkkleedilvledqnnklskekklleeRiaeltsnlaeeeeksksLsklknkheavisdledRlkkeektRqelekakRklegessdlqe 222 
                     l+akl k+ +d+     +++ l  e + + ++i++lt++ +  e+       l +k+e+ ++ l     k    R+e+e a+R l  e  ++ +
     KHJ32012.1 1109 LDAKLSKMAKDLAATRGKEKDLINENQKISQQISDLTTTSTSYED-------LVRKKESELAILRSDNLKYQEERKEFEIARRALILEKENVAN 1195
                     799*********************************998776665.......66688888888875544555579******************* PP

  Myosin_tail_1  223 qiadlqaq...ieelraqlakkeeelqaal.arleeeaa...qknaalkklreleaqlaelqedlesekaaRa 288 
                     ++ ++qa+   ie  ++ql +  ++++++l arl e+a+   +++ +  ++ +l+ ql+e+q dl +e+++R+
     KHJ32012.1 1196 RLLEVQANlfsIESQKNQLEREADNVRNLLdARLSEDAQasqSRKILEEQIEDLKQQLSEVQKDLSKERQSRD 1268
                     ******9822256666777777777777763455554431114556678999*******************97 PP

  == domain 3  score: -13.9 bits;  conditional E-value: 7
  Myosin_tail_1   25 ekelkelekkqqqlleeklaLqeqLqaetelfaeaeemRaRLaarkqele.eilhdleaRleeeeer.aqqlqsekk..km.qqniqdleeqld 113 
                     e++ +el kk +   + k+++q++L+a ++    a   R++ +   +e   e+ +  ea+   ee r +++l +++   ++ +++ + l ++l+
     KHJ32012.1 1275 EHKYNELLKKFEENDKAKVIIQKELHAQQDALRRAVKARSQAEEELKEARnEVKRINEAKHVAEEARiQAELAKDRSasRLaHERETSLRKDLE 1368
                     6677778888888888888888888888888888888888777666665414444446664444444155677776422331445567888888 PP

  Myosin_tail_1  114 eeeaaRqkLqlekvtleaklkkleedilvledqnnklskekklleeRiaeltsnl.aeeeeksksLsklknkheavisdledRlkkeektR.qe 205 
                      e +  +    e   l+ ++ +le+ il   +   k  kek  le  ++  +s+l a e++    L+kl++k    i+  + R+  + +++  +
     KHJ32012.1 1369 AEQNRAKYFEDECFRLNQQVEELEKTILDSGNFGMKSDKEKERLERDLNTAKSRLiASENDNRTLLNKLQQKG-LEIARSNSRVAENSRNKlLN 1461
                     8777777777888889999999999888888888899999999999999888886355555666678888885.45677778876655544245 PP

  Myosin_tail_1  206 lekakRklegessdlqeqiadlqaqieelraqlakkeeelqaalarleeeaaqknaalkklreleaqlaelqedlesekaaRakaekqrrdLg 298 
                     l++ k + +   + l+ q+ d q  ++ l +q ++ e +++++ + +  e ++  ++ k+l +++ ql+e +  le e++   ++++++r+L 
     KHJ32012.1 1462 LQREKVRSDELNQKLNKQLGDAQVALASLEKQKQRLELNVEDLTHEVAREHKATRNSEKALINIKDQLTESNRKLEVERQLNVQSQARNRQLL 1554
                     666666666667788999999999999999999999999999999999999988899999999999999999999999999888888888874 PP

  == domain 4  score: 18.1 bits;  conditional E-value: 1.9e-07
  Myosin_tail_1  445 vsslleeaegksiklskdvsslesqlqDtqellqeetrqkLalssrlrqleeeknalkeqleeeeeakknvekqlstlqaqlsdlkkkl.eeea 537 
                     +++ +ee ++k   ++ ++  l+sql+     l+e+  ++   s r+++le+ ++ l+e+l+   ++   +ek ++t +  + d++ k  ee  
     KHJ32012.1 1712 LKAEVEELQNKLQFSQMQIRYLQSQLD-RSTPLSEDFNEQNPSSRRVQKLEQVNSRLHEMLDVSSKKVSVLEKSIHTGNLTFRDVQTKShEELF 1804
                     67788999999999999*********5.566678888888899******************************************977516667 PP

  Myosin_tail_1  538 savealeeakkrlqrelealtqrleekaaaydklektkkRlqqeldDllvdldk 591 
                     +++++ e++++ +     ++  +l+e +++++ l +t+  l+ el D   dl++
     KHJ32012.1 1805 EIINSQEDSRRSILSLHTNTVAELNEIKKSFENLKHTRATLEVELRDAKSDLEE 1858
                     999*********99999999***************************9999875 PP

  == domain 5  score: 37.7 bits;  conditional E-value: 2.2e-13
  Myosin_tail_1  813 eleearasrdeilaqakesekklksleae..llqlqedlaaae.....rakrqveqerDeladeiasgaskksalldekRrleariaqleeele 899 
                      l ++ asrde+++   +++ k+ +l ++  ll+   d   +e     r kr++e+  +e +  + + a+++s    +  +++  + +l+  + 
     KHJ32012.1 2073 TLSDLAASRDEAVKAHIDAQDKIVNLISQlrLLRTSTDDVISErdsllREKRNLETRLEEAKAGLDNLAKSESPSIRDAANIDRELLELKSSVA 2166
                     5789999****************99987622577778888888333334799*****************************************9 PP

  Myosin_tail_1  900 eeqsnvellndrlrkatlqveqltaeLsaeRsasqksesarqqlerqnkelkakLqelegavkskykssiaaleakiaqleeqleqeskerqaa 993 
                     +++  v     ++r+a+  + +++++L aeR ++ k ++ +  ler  k+++++L +le++  s   + +  l+ ++++le ql++   er+++
     KHJ32012.1 2167 QQEDLVTAAVGKMRRAEALASEMQKDLVAEREMTVKLNTEKAALERSLKDVQLRLIDLETKGYSSASQDVRFLNNRVQELEAQLDAQEDERNKT 2260
                     999999999************************************************************************************* PP

  Myosin_tail_1  994 aklvrrtekklkevllqvedeRrnadqykdqvekansrlkqlkrqLeeaeeeasRanaarRklqReLddatesaealnRevstlks 1079
                     +++ r  ++ +k++  qve   +  +q ++++ +++ ++ +l + ++e     s ++ + R+ +R L++ +e a+ l+Re+   ks
     KHJ32012.1 2261 QRTARNFDRTIKDLQQQVERRDKANNQLQEEIARSRDKVEKLLKTIDELQSSESDTQLTARRAERALNEEKERASRLERELEGWKS 2346
                     ********************************************************************************987665 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   2.1e-05     0.055      31      84 ..     247     300 ..     238     303 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.1e-05
       AAA_7  31 knkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiies 84 
                 k+++++l++G++G GKt  +k++++ l    y+   ++ + q ++n  q+i+ +
  KHJ32012.1 247 KQNQSILVTGESGAGKTENTKKIIQYLAAVAYSESPVKNKIQQQSNLSQQILRA 300
                 67899********************************************99976 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       4.4   1.1e+04      76     111 ..     135     170 ..     121     189 .. 0.62
   2 ?   14.3   0.0   1.4e-05     0.036       3      66 ..     247     309 ..     244     385 .. 0.58
   3 ?   -1.4   0.0         1   2.6e+03      75     107 ..     517     555 ..     492     573 .. 0.62
   4 ?   -3.2   0.5       3.6   9.1e+03      63      84 ..    1014    1044 ..     966    1079 .. 0.58
   5 ?   -3.2   0.9       3.8   9.6e+03      70     103 ..    1291    1336 ..    1231    1359 .. 0.63
   6 ?   -0.1   1.2      0.41     1e+03      38      96 ..    1481    1556 ..    1420    1571 .. 0.62
   7 ?   -1.2   0.3      0.91   2.3e+03      58      91 ..    1951    1984 ..    1903    2000 .. 0.65
   8 ?   -2.0   0.7       1.6     4e+03      61     103 ..    2275    2312 ..    2228    2335 .. 0.59

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 4.4
      AAA_22  76 eellealeqalraravielliiDEaqhlr..seealee 111
                 ++ll ++e+ +++     ll iD++      +++ + e
  KHJ32012.1 135 DQLLVQCEDGSQRVVN--LLAIDNVNPAKfdKADDMAE 170
                 5566666666666655..99999987764432333333 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 1.4e-05
      AAA_22   3 ktagilvvtGesGtGKTtllrrlleqldeeakaee...erpevvfvtlpsstsskdl.lrellralgl 66 
                 k+ ++++vtGesG+GKT   +++ + l ++a+ e    +     +++ +s  s++ l ++ +l+a+g+
  KHJ32012.1 247 KQNQSILVTGESGAGKTENTKKIIQYLAAVAYSESpvkN-----KIQQQSNLSQQILrANPILEAFGN 309
                 58899*******************999887776553330.....333333334444434444444443 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 1
      AAA_22  75 seellealeqalraravielliiDEaqhlr..s........ee 107
                  ++l+++++++l+++    ++ iDE +++            ++
  KHJ32012.1 517 FSDLVNQINRQLDQT----AIGIDESHFIGvlDiagfeifeKN 555
                 445555555555555....669999999844413343333355 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 3.6
      AAA_22   63 alglelka.........erlsseellealeq 84  
                  +l+ ++ a         e  +  +l+++leq
  KHJ32012.1 1014 ILDAKRTAenqveklcaELEQAGHLISKLEQ 1044
                  2332222222222222223333333333333 PP

  == domain 5  score: -3.2 bits;  conditional E-value: 3.8
      AAA_22   70 a.............erlsseellealeqalraravielliiDEaqhl 103 
                  a             +  +    +++ e+ l++++  e+  i Ea h+
  KHJ32012.1 1291 AkviiqkelhaqqdALRRAVKARSQAEEELKEARN-EVKRINEAKHV 1336
                  34444433333333355555555566666666666.66666666665 PP

  == domain 6  score: -0.1 bits;  conditional E-value: 0.41
      AAA_22   38 erpevvfvtlpsstsskdl.lrellralglelka................erlsseellealeqalraravielli 96  
                   +++v++  l +++ + +l  ++l +++ +e+ka                e +++ e+ ++l+ +++ar ++ l+i
  KHJ32012.1 1481 GDAQVALASLEKQKQRLELnVEDLTHEVAREHKAtrnsekalinikdqltESNRKLEVERQLNVQSQARNRQLLMI 1556
                  3444445555555544455555555555555555555566666666665555555666666666666666644444 PP

  == domain 7  score: -1.2 bits;  conditional E-value: 0.91
      AAA_22   58 rellralglelkaerlsseellealeqalrarav 91  
                   ++ ++l++++ +++ ++e+l++ le a++ar++
  KHJ32012.1 1951 DAIIEELQRQNQSNEEKLEDLYTDLEAAVQARKR 1984
                  3444444444444555566666666666666554 PP

  == domain 8  score: -2.0 bits;  conditional E-value: 1.6
      AAA_22   61 lralglelkaerlsseellealeqalrarav...ielliiDEaqhl 103 
                   +++++        ++   ++l++ + + ++   + l  iDE q  
  KHJ32012.1 2275 QQQVER--------RDKANNQLQEEIARSRDkveKLLKTIDELQSS 2312
                  222222........22223333333333333444466688888875 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   7.9e-05       0.2      18      51 ..     243     282 ..     223     294 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 7.9e-05
                 H.....TEEEEEEESTTSSHHHHHHHHHHHTT--.----T CS
        TsaE  18 l.....gdvilLeGdLGaGKTtlvrglakalgve.evkSP 51 
                 l     ++ il +G+ GaGKT  ++++++ l      +SP
  KHJ32012.1 243 LveekqNQSILVTGESGAGKTENTKKIIQYLAAVaYSESP 282
                 223334567********************99765577777 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00046       1.2       5      38 ..     244     277 ..     241     302 .. 0.87
   2 ?   -2.5   0.7       2.3     6e+03      77     138 ..    1516    1588 ..    1458    1590 .. 0.65
   3 ?   -3.7   0.3       5.5   1.4e+04      70     115 ..    2269    2313 ..    2234    2323 .. 0.53

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00046
      AAA_19   5 vealkekvllvtaGpGtGKTrvlkhivallvelg 38 
                 ve+ +++ +lvt+  G GKT+ +k+i+++l ++ 
  KHJ32012.1 244 VEEKQNQSILVTGESGAGKTENTKKIIQYLAAVA 277
                 56778999********************998765 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.3
      AAA_19   77 l......ldfddlltealelle...eaeeekklqeeellivDEfqdvd.elqyrLlkallgek.kklllvGDp 138 
                         ++++d+lte    le   + + +++ ++++ll++ E  + +  + ++L++  ++++  ++  +GD+
  KHJ32012.1 1516 RnsekalINIKDQLTESNRKLEverQLNVQSQARNRQLLMIIENREKEiLQLMKLIDPEVTQTiPQINHLGDK 1588
                  1333333777888888888887877667777777778888888888776777778876665666667777776 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 5.5
      AAA_19   70 tTiHrlalldfddlltealelle.eaeeekklqeeellivDEfqdvd 115 
                  +Ti  l   +  ++ ++a + l+ e +++++  e+ l  +DE q  +
  KHJ32012.1 2269 RTIKDL--QQQVERRDKANNQLQeEIARSRDKVEKLLKTIDELQSSE 2313
                  444444..222222223333333332333322245577788887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3008  (0.167773); expected 358.6 (0.02)
Passed bias filter:                      579  (0.032294); expected 358.6 (0.02)
Passed Vit filter:                       228  (0.0127168); expected 17.9 (0.001)
Passed Fwd filter:                        84  (0.00468515); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 3.69u 0.38s 00:00:04.07 Elapsed: 00:00:00.79
# Mc/sec: 9113.83
//
Query:       KHJ32013.1  [L=188]
Description: hypothetical protein EV44_g0447 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.026   14.0   0.2      0.039   13.4   0.2    1.3  1  DUF3112   Protein of unknown function (DUF3112)


Domain annotation for each model (and alignments):
>> DUF3112  Protein of unknown function (DUF3112)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   2.2e-06     0.039      78     141 ..     113     172 ..      99     184 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.2e-06
     DUF3112  78 tkkdeklltyqpfwieSFsifyfvkkgaakeaeksflkrnsnekrhaiRviaathhhykavegl 141
                  kk+++l  ++++  +SF+  y+  +   k+++k f k+++n  +++ Rv+ +t+   + v+ +
  KHJ32013.1 113 EKKRKNLKPFTATSYQSFQGPYYEYPIRGKHKKKLFAKKKKN--KYPNRVVINTQC--EIVDVV 172
                 468888999999999999999*****************9999..99***9977773..333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1424.85
//
Query:       KHJ32014.1  [L=692]
Description: putative acetolactate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.8e-52  176.8   0.0    9.9e-52  175.0   0.0    1.9  2  TPP_enzyme_N  Thiamine pyrophosphate enzyme, N-terminal TPP b
    7.3e-48  162.2   0.2      2e-46  157.6   0.0    2.7  3  TPP_enzyme_C  Thiamine pyrophosphate enzyme, C-terminal TPP b
    5.3e-37  126.6   0.1    1.7e-36  124.9   0.1    1.9  2  TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain


Domain annotation for each model (and alignments):
>> TPP_enzyme_N  Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.0   0.0   1.7e-55   9.9e-52       2     165 ..      89     251 ..      88     256 .. 0.98
   2 ?   -2.5   0.0      0.55   3.3e+03     107     158 ..     597     643 ..     553     647 .. 0.52

  Alignments for each domain:
  == domain 1  score: 175.0 bits;  conditional E-value: 1.7e-55
                   EHHHHHHHHHHHCT--EEEE---CCCHHHHCCHHCT.TSEEEE-SSHHHHHHHHHHHHHHHTS-EEEEE-CHHHHHHCHHHHHHHHHHT--EEEEEE CS
  TPP_enzyme_N   2 tvaealvraLkalgvehvfgvpGsrilplldalseeqgirvvlarhEqgaafaAdgyaratgkpgvvlvtsgpGatnaltalaeAkvdriPllvlsg 98 
                   t++e++ +++ ++gv+h+fg+pG+ ilp++da+ +++ ++++l  hEqga+++A+gyara+g pgv+lvtsgpGatn++t + +A +d++Pl+v++g
    KHJ32014.1  89 TGGEIFHEMMLRQGVKHIFGYPGGAILPVFDAIYNSRHFDFILPKHEQGAGHMAEGYARASGLPGVILVTSGPGATNVITPMQDALSDGTPLVVFCG 185
                   899********************************************************************************************** PP

                   E--CCCHHS..TC--T-CCHHHCCCSSEEEE-SSGGGHHHHHHHHHHHHHSSS--EEEEEEEHHHCC CS
  TPP_enzyme_N  99 drptslrgqgvlqqeldqlalfrpvtkyaervtspeelpealrrAirtalsgrpgPvylelpkdvll 165
                   ++pt+ +g +++q e d  ++ r +tk+++ v++++elp+ + +A+++a+sgrpgPv+++lpkdv  
    KHJ32014.1 186 QVPTTAIGSDAFQ-EADVIGISRACTKWNVMVKNVAELPRRINEAFEIATSGRPGPVLVDLPKDVTA 251
                   *************.**************************************************976 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.55
                   S..TC--T-CCHHHCCCSSEEEE-SSGGGHHHHHHHHHHHHHSSS--EEEEE CS
  TPP_enzyme_N 107 qgvlqqeldqlalfrpvtkyaervtspeelpealrrAirtalsgrpgPvyle 158
                    ++  ++ d ++l   +   a+r+++p+++   l+  i+       gP++le
    KHJ32014.1 597 SHTHSENPDFMKLSDAMGIQARRCKRPDDVIDSLQWLIESE-----GPAFLE 643
                   44444444666665555566666666666665555444443.....565555 PP

>> TPP_enzyme_C  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.035   2.1e+02     108     152 ..     197     244 ..     182     245 .. 0.71
   2 ?   -2.3   0.0      0.57   3.4e+03      62     143 ..     354     394 ..     350     428 .. 0.51
   3 !  157.6   0.0   3.3e-50     2e-46       1     153 []     497     644 ..     497     644 .. 0.98

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.035
                   S----HHHHHHHTTSEEEEESSH.HHHHHHHHHHHH.....CSSSEEEEE CS
  TPP_enzyme_C 108 lkpvdfaklaealGakgarvekadveeleealkeal.....ekkgpalie 152
                   +++ d+  + +a+      v +++v+el + + ea+      + gp+l++
    KHJ32014.1 197 FQEADVIGISRACTKW--NVMVKNVAELPRRINEAFeiatsGRPGPVLVD 244
                   5666777777777333..56677789999999999888878899999997 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.57
                   GGGHHHHHHTT-SEEEEE...EE-SBCCCHHHH..HHHHTCCTTTTSBB.BS----HHHHHHHTTSEEEEESSH.HHHHHHHHHHHH CS
  TPP_enzyme_C  62 lqelatavrrnlpitvvv...lnNegygmtggq..qepfggkrksgpagkdlkpvdfaklaealGakgarvekadveeleealkeal 143
                   ++++a+ + + +++++ +   ++++++g+ ++   q                                               k+a 
    KHJ32014.1 354 GSAYANLAMQEADLVIALgarFDDRVTGNLKKFapQ----------------------------------------------AKAAA 394
                   555555555555555554334555666555555432..............................................33332 PP

  == domain 3  score: 157.6 bits;  conditional E-value: 3.3e-50
                   ESSHHHHHHHHHHTTSSSSEEECETTTS-TTTHHHHHHHHHHHSTTSEEEEEEEHHHHHHTGGGHHHHHHTT-SEEEEEEE-SBCCCHHHHHHHHTC CS
  TPP_enzyme_C   1 diGcltlwaarllkvkrprsyltsgglgtmGyglpaAiGaklakpdrevvaivGDGgflmilqelatavrrnlpitvvvlnNegygmtggqqepfgg 97 
                   ++G++++w+a++++ + pr+++tsgglgtmGyglpaAiGak+a+pd+ v+ i GD +f m+l+e++ta + n+ ++++vlnNe  gm+ ++q+ f++
    KHJ32014.1 497 GVGQHQMWTAQHFRWRHPRTMITSGGLGTMGYGLPAAIGAKVARPDALVIDIDGDASFNMTLTEMSTAKQFNIGVKIIVLNNEEQGMVTQWQNIFYE 593
                   69*********************************************************************************************** PP

                   CTTTTSBB.BS----HHHHHHHTTSEEEEESSH.HHHHHHHHHHHHCSSSEEEEEE CS
  TPP_enzyme_C  98 krksgpagkdlkpvdfaklaealGakgarvekadveeleealkealekkgpaliev 153
                   +r+s+++   ++++df kl  a+G+++ r++++  +++ + l++ +e++gpa++ev
    KHJ32014.1 594 DRYSHTH---SENPDFMKLSDAMGIQARRCKRP--DDVIDSLQWLIESEGPAFLEV 644
                   *****99...9999************99*9999..*******************97 PP

>> TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.58   3.5e+03      51      81 ..     173     203 ..     166     205 .. 0.74
   2 !  124.9   0.1   2.9e-40   1.7e-36       3     132 ..     289     427 ..     287     432 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.58
                   SS-TTSTTEEEESGGGSCHHHHHHHHH-SEE CS
  TPP_enzyme_M  51 vipedhplylgmlglhgskaanealeeaDlv 81 
                   ++++  pl +    +  ++ +++a++eaD++
    KHJ32014.1 173 ALSDGTPLVVFCGQVPTTAIGSDAFQEADVI 203
                   6666777776666666678899999***998 PP

  == domain 2  score: 124.9 bits;  conditional E-value: 2.9e-40
                   HHHHHHHH-SSEEEEE-CHHCHT.TGHHHHHHHHHHHT-EEEEEGGGTTSS-TTSTTEEEESGGGSCHHHHHHHHH-SEEEEES-SSSTCCCTTTTT CS
  TPP_enzyme_M   3 kaaellkaakrpvilvGggvars.gaseelrelaeklgiPvvttlmgkgvipedhplylgmlglhgskaanealeeaDlvlalGarfddirttgsep 98 
                   ++a l++ +k+p+i++G+g+ +s +  + l+el++k  iPv+ttl+g g ++e ++++l+mlg+hgs++an a++eaDlv+alGarfdd r+tg+ +
    KHJ32014.1 289 RVARLINISKKPIIYAGQGIVNSpEGPQLLKELSDKSSIPVTTTLQGLGGFDELDEKSLHMLGMHGSAYANLAMQEADLVIALGARFDD-RVTGNLK 384
                   89*******************999*****************************************************************.******* PP

                   TTTTT-E.........EEEEESSCCCCTTCC--SEEEECTHHH CS
  TPP_enzyme_M  99 efapeak.........iihididpaeigknyqvdlaivgdvke 132
                   +fap+ak         i+h++i p++i+k ++++ a+ gd+ +
    KHJ32014.1 385 KFAPQAKaaaeknlggIVHFEILPKNINKIVHATEAVEGDLVQ 427
                   *****87789999999************************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (692 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.40
# Mc/sec: 5215.38
//
Query:       KHJ32015.1  [L=416]
Description: putative mitochondrial protein import protein mas5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-40  138.3   0.6    2.6e-40  137.9   0.6    1.2  1  DnaJ_C          DnaJ C terminal domain
    1.2e-25   89.4   3.1    2.2e-25   88.5   3.1    1.4  1  DnaJ            DnaJ domain
    6.8e-16   58.4  21.1    1.5e-15   57.3  21.1    1.6  1  DnaJ_CXXCXGXG   DnaJ central domain
  ------ inclusion threshold ------
       0.28   11.7   6.4       0.38   11.2   1.5    2.7  2  Cytochrom_c3_2  Cytochrome c3
        2.2    8.3  12.3        3.1    7.8   3.3    2.4  2  HypA            Hydrogenase/urease nickel incorporation, meta
        4.8    7.2  16.9       0.64   10.0   2.5    2.4  2  Anti-TRAP       Tryptophan RNA-binding attenuator protein inh


Domain annotation for each model (and alignments):
>> DnaJ_C  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.9   0.6   8.6e-44   2.6e-40       2     148 .]     122     341 ..     121     341 .. 0.95

  Alignments for each domain:
  == domain 1  score: 137.9 bits;  conditional E-value: 8.6e-44
                 EEEEEE-HHHHHH-.EEE.EEEE..........................................................................TE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx...................................................................xxxxxx RF
      DnaJ_C   2 eveleisleelykGktkkikikrnvi...................................................................kkekkt 33 
                 ++  ++sle++y+Gk  k+++++ vi                                                                   ++e+k+
  KHJ32015.1 122 HHIHKVSLEDIYRGKVSKLALQKSVIcqkcegrggkegavkkcsgcdgmgmktmmrqmgpmiqrfqtqcsdcngegeiirekdkckvchgkktVVERKV 220
                 67789*******************99******************************************************************999999* PP

                 EEEEE-TT--TT-EEEETT-SSSS...S---EEEEEEE---SS-EEETTEEEEEEEEEHHHHHHTEEEEEE-S.S-EEEE.....EE--TT-EEEETT- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxx.....xxxxxxxxxxxxxx RF
      DnaJ_C  34 levkipaGikdgqkirlegeGdeeg.gepGDlivtikvkphpvFkrkgndlyveveislaeallGgklevptl.dgkvkl.....kitqpgevlrikgk 125
                 l+v++++G+++g++i ++geGd+ + ++pGD++++i++kphp+F+rk++dl++++ei+l++al Gg+l ++ l ++  ++     ++++pg+v++++g+
  KHJ32015.1 221 LHVHVDKGVRSGTRIEFKGEGDQTPgVQPGDVVFEIEQKPHPRFQRKDDDLIYQAEIDLVTALAGGTLYIEHLdEQWLNIeilpgEVISPGSVKMLRGQ 319
                 **********************9998******************************************9999953444554466666************ PP

                 S-EET...TEE--EEEEEEEE-- CS
                 xxxxxxxxxxxxxxxxxxxxxxx RF
      DnaJ_C 126 GmpklkkpgkrGdlyvevkvefP 148
                 Gmp+++ ++++G+++v+++v+fP
  KHJ32015.1 320 GMPSHR-HHHHGNMFVQFDVKFP 341
                 *****8.***************9 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.5   3.1   7.4e-29   2.2e-25       2      63 .]       7      68 ..       6      68 .. 0.99

  Alignments for each domain:
  == domain 1  score: 88.5 bits;  conditional E-value: 7.4e-29
                HHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  2 yYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63
                +Y+iL+v+++++e+e+kkaY+  alk+HPDkn+++p+a+ekFkei++AyevLsdp+kR++YD
  KHJ32015.1  7 LYDILQVQPNCTEAELKKAYKINALKHHPDKNRSNPNAAEKFKEISHAYEVLSDPQKRQIYD 68
                8************************************************************9 PP

>> DnaJ_CXXCXGXG  DnaJ central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.3  21.1     5e-19   1.5e-15       1      67 []     148     213 ..     148     213 .. 0.93

  Alignments for each domain:
  == domain 1  score: 57.3 bits;  conditional E-value: 5e-19
  DnaJ_CXXCXGXG   1 CkkCkGsgakkgkkktCktCkGsG.vvreeqktlgpfvqqsqstCpeCeGtGkvikekdkCkkCkGkg 67 
                    C+kC+G+g k+g++k+C+ C+G G +++++q  +gp++q++q++C++C+G+G++i+ekdkCk C+Gk+
     KHJ32015.1 148 CQKCEGRGGKEGAVKKCSGCDGMGmKTMMRQ--MGPMIQRFQTQCSDCNGEGEIIREKDKCKVCHGKK 213
                    ************************4455555..9********************************96 PP

>> Cytochrom_c3_2  Cytochrome c3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.2       0.1     3e+02       4      34 ..     143     169 ..     134     180 .. 0.72
   2 ?   11.2   1.5   0.00013      0.38       6      42 ..     187     219 ..     182     234 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.1
                     CCT.TGGGTSSSST-SSTTHHHHHHHHHHH- CS
  Cytochrom_c3_2   4 kegvkCadCHtkekpkkdkaveeekClsCHg 34 
                     +++v C++C ++  +    +   +kC  C g
      KHJ32015.1 143 QKSVICQKCEGRGGK----EGAVKKCSGCDG 169
                     566778888887775....345677888866 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00013
                     T.TGGGTSSSST-SSTTHHHHHHHHHHH--HHHCHTT CS
  Cytochrom_c3_2   6 gvkCadCHtkekpkkdkaveeekClsCHgkleelakk 42 
                     +++C+dC ++ +       e++kC+ CHgk++ +++k
      KHJ32015.1 187 QTQCSDCNGEGEII----REKDKCKVCHGKKTVVERK 219
                     679*****999974....4789********9988776 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   1.7    0.0068        20      68      98 ..     143     173 ..     125     179 .. 0.83
   2 ?    7.8   3.3     0.001       3.1      68      99 ..     185     216 ..     178     224 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0068
                 --EEEETTTS-EEECHHHHHS-TTTSSS-EE CS
        HypA  68 pvkvrCreCgkefeleekalrCpkCgsadve 98 
                 + +v C++C+ ++ +e +  +C  C++ +++
  KHJ32015.1 143 QKSVICQKCEGRGGKEGAVKKCSGCDGMGMK 173
                 56799*****99998876678****998876 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.001
                 --EEEETTTS-EEECHHHHHS-TTTSSS-EEE CS
        HypA  68 pvkvrCreCgkefeleekalrCpkCgsadvei 99 
                 + +++C++C+ e+e+ +++ +C+ C+++++ +
  KHJ32015.1 185 RFQTQCSDCNGEGEIIREKDKCKVCHGKKTVV 216
                 67899*********7765578*****987654 PP

>> Anti-TRAP  Tryptophan RNA-binding attenuator protein inhibitory protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   6.2      0.03        89      12      41 ..     147     172 ..     142     186 .. 0.89
   2 ?   10.0   2.5   0.00021      0.64       9      42 ..     186     215 ..     176     219 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.03
                 E-TTTTTTSEETTE......E-TTTTTSSE CS
   Anti-TRAP  12 kCdaCngsGkiepeeprasleCPkCsGkgl 41 
                  C++C+g G  e++      +C  C G g+
  KHJ32015.1 147 ICQKCEGRGGKEGA----VKKCSGCDGMGM 172
                 6********99999....779*9**99986 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00021
                 CEEE-TTTTTTSEETTE......E-TTTTTSSEE CS
   Anti-TRAP   9 LEtkCdaCngsGkiepeeprasleCPkCsGkgli 42 
                   t+C  Cng G+i  e      +C  C Gk+ +
  KHJ32015.1 186 FQTQCSDCNGEGEIIRE----KDKCKVCHGKKTV 215
                 5799**********999....558*******976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       732  (0.0408277); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3088.30
//
Query:       KHJ32016.1  [L=89]
Description: hypothetical protein EV44_g6193 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       234  (0.0130515); expected 358.6 (0.02)
Passed bias filter:                      197  (0.0109878); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 648.23
//
Query:       KHJ32017.1  [L=439]
Description: putative wlm domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-30  105.6   0.3    9.3e-30  104.1   0.3    1.7  1  WLM       WLM domain
    5.7e-08   33.0   0.1    5.7e-08   33.0   0.1    1.9  2  DUF45     Protein of unknown function DUF45
  ------ inclusion threshold ------
        1.2    9.3   6.3        1.2    9.3   1.9    2.7  2  Zf_RING   KIAA1045 RING finger
        3.4    7.3   9.6        1.6    8.3   4.3    2.8  3  RecR      RecR protein
          8    6.6   7.0         20    5.3   7.0    1.7  1  DZR       Double zinc ribbon


Domain annotation for each model (and alignments):
>> WLM  WLM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.1   0.3   2.6e-33   9.3e-30       8     180 ..      21     190 ..      15     248 .. 0.85

  Alignments for each domain:
  == domain 1  score: 104.1 bits;  conditional E-value: 2.6e-33
         WLM   8 vlk..kkpekeaalellkriakdvqpimkkhkfkVglLtElaPkeanlLGlNvnkGekieLrLRtdkddkeflpyesimgtllHELaHnvygpHdakFy 104
                 ++k    p+++ ++++l+ria++  pimkkh+  V +L E  P+ + ++G N n+Ge+i+L L++++  +++lp++ +  +++HELaH++  +H + F+
  KHJ32017.1  21 FIKprPGPDESTSQKYLERIAAQCVPIMKKHHLYVVTLEEYEPNLE-FWGRNFNNGEVIQLVLKSPST-NRWLPFNFVQMVFMHELAHCKEMNHSKAFW 117
                 4552235889999******************************988.********************9.****************************** PP

         WLM 105 allkeLekeveelkakGlk.egflkeGkrlggkevrnksaeeeeekealekagiagkgarlGgrseektrskasare 180
                  l +e  +e+++l  kG++ eg  ++G  l++++++ +    + + +++  + + g+++r  ++++ k+r+k + +e
  KHJ32017.1 118 TLRNEFAAEMKALWDKGYTgEGLWGKGILLSDTSFSCE----NFDVNEVFPESMCGGTYRTRASRKRKSRPKLTHKE 190
                 **********************************9976....56666666666777777666666655555444443 PP

>> DUF45  Protein of unknown function DUF45
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.1   1.6e-11   5.7e-08     161     198 ..      91     128 ..      66     133 .. 0.90
   2 ?   -2.5   0.2       1.2   4.2e+03      48      76 ..     193     221 ..     174     260 .. 0.53

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 1.6e-11
       DUF45 161 appevidYVvvHElaHlleknHskrFwalvekllPdwk 198
                 +p ++++ V +HElaH +e+nHsk+Fw l +++  ++k
  KHJ32017.1  91 LPFNFVQMVFMHELAHCKEMNHSKAFWTLRNEFAAEMK 128
                 5788999*********************9998877666 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.2
       DUF45  48 akeaekelesgesfpllGkkyrlkvekgk 76 
                 ++  +k++ s+ +    +++++l +e +k
  KHJ32017.1 193 EQRIRKKFGSNGKSLGADEEVKLVLENKK 221
                 23333344444333334444444444444 PP

>> Zf_RING  KIAA1045 RING finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.15   5.3e+02      11      39 ..     154     182 ..     148     201 .. 0.80
   2 ?    9.3   1.9   0.00033       1.2       7      29 ..     379     401 ..     373     420 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.15
     Zf_RING  11 CevytaeelypCRvCtkvfHegClrklgy 39 
                 Ce +  +e +p  +C   + +   rk + 
  KHJ32017.1 154 CENFDVNEVFPESMCGGTYRTRASRKRKS 182
                 999************99998887777554 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00033
     Zf_RING   7 lCeiCevytaeelypCRvCtkvf 29 
                 +C iC++  +e+ + C +C+ v 
  KHJ32017.1 379 TCPICSFIDSEASLICTICSNVL 401
                 7*******************997 PP

>> RecR  RecR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.6   5.8e+03      11      20 ..     317     326 ..     316     327 .. 0.78
   2 ?    8.3   4.3   0.00045       1.6      18      36 ..     379     399 ..     376     400 .. 0.82
   3 ?    0.5   0.1      0.13   4.5e+02      27      35 ..     427     435 ..     423     438 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.6
                 HHHHH-EE-T CS
        RecR  11 eakekvrhCs 20 
                 e+ke ++ Cs
  KHJ32017.1 317 ELKELLKLCS 326
                 7888899998 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00045
                 E-TTT--EESSS..S-CCCCS CS
        RecR  18 hCsrCgnlteed..lCaICsd 36 
                  C++C  ++ e   +C+ICs+
  KHJ32017.1 379 TCPICSFIDSEAslICTICSN 399
                 7*******6665567****98 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.13
                 SSSS-CCCC CS
        RecR  27 eedlCaICs 35 
                 +++ C IC+
  KHJ32017.1 427 DTNFCGICT 435
                 778899996 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   7.0    0.0056        20       1      49 []     380     435 ..     380     435 .. 0.92

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0056
         DZR   1 CpqCgeelppdarfCseCgtklkavaa.......edrCpsCgekvdpearfCpeCG 49 
                 Cp C    ++ +  C  C + lk+  +       + +C +  + ++ +++fC+ C+
  KHJ32017.1 380 CPICSFIDSEASLICTICSNVLKPNLDskswkcdKPTCANKLYVNTGDTNFCGICT 435
                 999*999999999*********9877799999999999999999***********5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       694  (0.0387082); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3171.80
//
Query:       KHJ32018.1  [L=449]
Description: putative camp-independent regulatory protein pac2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-46  158.5   2.4    2.8e-37  128.6   0.2    2.3  2  Gti1_Pac2  Gti1/Pac2 family


Domain annotation for each model (and alignments):
>> Gti1_Pac2  Gti1/Pac2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.6   0.2   1.6e-41   2.8e-37       1      90 [.       3      91 ..       3     111 .. 0.91
   2 !   30.4   0.2   2.1e-11   3.8e-07     136     181 .]     103     149 ..      93     149 .. 0.80

  Alignments for each domain:
  == domain 1  score: 128.6 bits;  conditional E-value: 1.6e-41
                SEES---SHHHHHHHHHHHHTTSS---SS---HHHHHHHSSTTEEEEEEHHHH--SS---S--B---EEETTEEEEEB------------ CS
   Gti1_Pac2  1 tfkgyiettkdalllieavlegilkrvtrRlkekErkeliksGsvFvfeeeesgikRWTDGvsWSpSrilgnfLvYreldkkrakkkkkk 90
                t+ g+i+t +da+ l+ea++ g+l+rv rRl+ek r+ liksGsvF+++e+e+g++RWTDG +WSpSr++g+fL+Yre+d kra++++ +
  KHJ32018.1  3 TYFGHIKTPADAIKLFEACRLGLLQRVRRRLSEKQRQ-LIKSGSVFIWDEHEAGMRRWTDGKNWSPSRVSGSFLTYREMDGKRASHNELA 91
                8************************************.********************************************99988755 PP

  == domain 2  score: 30.4 bits;  conditional E-value: 2.1e-11
                 -------------------------EEEEEEEE.EETTTEEEEEEE- CS
   Gti1_Pac2 136 slekdserslvgsltdsykfkkdgLvKkTisvt.lkgkelhlisYyk 181
                 ++   s+++l ++ +++y++k dgL+K+T+s+t  +g++lhlisYy+
  KHJ32018.1 103 ESIPVSDEELDEESHEQYRYKPDGLMKQTFSITtSTGQNLHLISYYS 149
                 44455677888899999**************98567899*******6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       310  (0.0172904); expected 358.6 (0.02)
Passed bias filter:                      254  (0.014167); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.22s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 3191.47
//
Query:       KHJ32019.1  [L=359]
Description: putative dnaj-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-36  124.9   2.4    3.4e-36  124.6   2.4    1.2  1  DnaJ_C    DnaJ C terminal domain
    7.9e-27   93.2   3.6    1.8e-26   92.0   3.6    1.7  1  DnaJ      DnaJ domain


Domain annotation for each model (and alignments):
>> DnaJ_C  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.6   2.4   3.8e-40   3.4e-36       4     148 .]     189     344 ..     186     344 .. 0.92

  Alignments for each domain:
  == domain 1  score: 124.6 bits;  conditional E-value: 3.8e-40
                 EEEE-HHHHHH-.EEE.EEEE..............TEEEEEE-TT--TT-EEEETT-SSSS..S---EEEEEEE---SS-EEETTEEEEEEEEEHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaJ_C   4 eleisleelykGktkkikikrnvi.......kkekktlevkipaGikdgqkirlegeGdeeggepGDlivtikvkphpvFkrkgndlyveveislaeal 95 
                 +l+++leelykG++kk+k+kr+v         +e+k+le +i++G k+g++i+++g Gd+  g + D++++i++k+hp+F r+g+d++++ve++l+eal
  KHJ32019.1 189 PLPLTLEELYKGTHKKMKVKRKVYdqvtgkrMTEDKVLEMDIKPGLKKGSRIKFKGVGDAVEGGQQDMHFVIEEKEHPRFVRDGDDVLHTVELDLKEAL 287
                 799******************999*****98778889**********************8889************************************ PP

                 HTEEEEEE-SS-E.EEE.EE..--TT-EEEETT-S-EET...TEE--EEEEEEEE-- CS
                 xxxxxxxxxxxxx.xxx.xx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaJ_C  96 lGgklevptldgk.vkl.ki..tqpgevlrikgkGmpklkkpgkrGdlyvevkvefP 148
                 +G +  v t+dgk +k+ k   tqpg++   +g+Gmp +kkp++rG+++v+++v+fP
  KHJ32019.1 288 TGWSRIVTTIDGKqIKIeKTgpTQPGSKDEYPGQGMPLSKKPDSRGKFIVTYQVKFP 344
                 **99989899655155543399**********************************9 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.0   3.6     2e-30   1.8e-26       2      63 .]       7      68 ..       6      68 .. 0.99

  Alignments for each domain:
  == domain 1  score: 92.0 bits;  conditional E-value: 2e-30
                HHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  2 yYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63
                +Y+ L+++++as+de+kkaYrk+alk+HPDkn+++p+++ekFk i++Aye+LsdpekR+ YD
  KHJ32019.1  7 LYDALEIDPSASQDEVKKAYRKMALKHHPDKNKDNPSSAEKFKVISQAYEILSDPEKRSLYD 68
                8************************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       507  (0.0282782); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2793.46
//
Query:       KHJ32020.1  [L=410]
Description: putative cdp-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-11   43.5   0.0    2.9e-06   27.2   0.0    2.9  2  PLDc_2    PLD-like domain
    1.7e-10   40.6   2.0    5.1e-05   23.3   0.1    3.0  3  PLDc      Phospholipase D Active site motif


Domain annotation for each model (and alignments):
>> PLDc_2  PLD-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0     7e-06     0.063      56     124 ..      39     109 ..       6     111 .. 0.71
   2 !   27.2   0.0   3.2e-10   2.9e-06      10     119 ..     219     358 ..     208     373 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 7e-06
      PLDc_2  56 aslkelkellleagvevrvfet.ll...gslHaKlylidgktvivGSsNltkrgldlnlElnvviedkelake 124
                  +l+++++    +g++ r++ +  +   g  H Kly +d+++  + ++Nl++ +++ +++    +++k+++++
  KHJ32020.1  39 IELRMYHTP-NLTGLKKRLIPRrINegwGLQHMKLYGFDDEII-ISGANLSNDYFTNRQDRYHLFSSKDITNY 109
                 444445555.555555555442322566889*******98875.5669********99999999999988876 PP

  == domain 2  score: 27.2 bits;  conditional E-value: 3.2e-10
      PLDc_2  10 ksidiatyyfvsdreildallk.aakrgvkvrilldskkd...............dagavdeaslkelkellleagvevrvfe..t.....llgslHaK 85 
                 +s  +  +yf++++e+ + ll  a++++    +++ s  +                 ++  ++ l+ +++  ++ ++ +++ +           ++HaK
  KHJ32020.1 219 SSWTFTAGYFNPTPELTELLLStASTSN---TVITASPWAngffsskgvsglipsAYTLLLRRFLQIIQRRNRTRNIAIKEWQygIvgepnS-WTYHAK 313
                 6666777777777777777766444444...5666653336777777777777763344445566666666677777777776441344432.589*** PP

      PLDc_2  86 lylid..gk.........tvivGSsNltkrgldlnlElnvviedk 119
                 +++i   g+         + ++GSsN+tkr+ +l+lE++v+i  k
  KHJ32020.1 314 GIWISlsGTneqgksgvdISVIGSSNYTKRSYSLDLEAGVIILTK 358
                 ****97722557889999***********************9776 PP

>> PLDc  Phospholipase D Active site motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.1   1.3e-06     0.012       3      28 .]      66      90 ..      65      90 .. 0.92
   2 !   23.3   0.1   5.7e-09   5.1e-05       2      28 .]     307     344 ..     306     344 .. 0.95
   3 ?   -2.3   0.0      0.67     6e+03       6      14 ..     376     384 ..     376     394 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.3e-06
                BEE---EEEETTTEEEEE---SSHHH CS
        PLDc  3 gthHqKivivDdrvafvGgaNLcdgr 28
                g++H+K + +Dd+  +++gaNL + +
  KHJ32020.1 66 GLQHMKLYGFDDE-IIISGANLSNDY 90
                689**********.********8865 PP

  == domain 2  score: 23.3 bits;  conditional E-value: 5.7e-09
                 TBEE---EEEETTT...........EEEEE---SSHHH CS
        PLDc   2 mgthHqKivivDdr...........vafvGgaNLcdgr 28 
                  +t+H+K+++++             ++++G++N+++++
  KHJ32020.1 307 SWTYHAKGIWISLSgtneqgksgvdISVIGSSNYTKRS 344
                 7***********9999*******************996 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.67
                 ---EEEETT CS
        PLDc   6 HqKivivDd 14 
                 H+K v +D+
  KHJ32020.1 376 HTKVVTIDE 384
                 9***99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2956.07
//
Query:       KHJ32021.1  [L=799]
Description: putative ubiquitin interaction domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00014   21.6   0.0    0.00049   19.8   0.0    2.0  2  UBA_4     UBA-like domain


Domain annotation for each model (and alignments):
>> UBA_4  UBA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   2.7e-08   0.00049      12      41 ..      19      48 ..       7      50 .. 0.86
   2 ?   -3.1   0.0       0.4   7.2e+03       6      24 ..     444     464 ..     443     465 .. 0.67

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 2.7e-08
       UBA_4 12 GadeekArqlLeannWdLerAislyFdsge 41
                G+ + ++++ L+ nn+++e+A++ y+d+++
  KHJ32021.1 19 GIPRKEIIRRLKGNNNNVEQALNEYYDNPD 48
                8889999********************986 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.4
       UBA_4   6 qFqaiTGa..deekArqlLea 24 
                 ++++iT+a  +   ++++Le+
  KHJ32021.1 444 RLTSITSAngNVYSVKDILEV 464
                 578999985555666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (799 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       784  (0.043728); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.42
# Mc/sec: 5715.65
//
Query:       KHJ32022.1  [L=77]
Description: hypothetical protein EV44_g3221 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 562.74
//
Query:       KHJ32023.1  [L=161]
Description: putative uncharacterized mitochondrial protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1238.42
//
Query:       KHJ32024.1  [L=241]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (241 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1741.50
//
Query:       KHJ32025.1  [L=312]
Description: putative 3-demethylubiquinone-9 3-o-methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.2e-20   72.6   0.0    4.3e-20   72.2   0.0    1.2  1  Methyltransf_23  Methyltransferase domain
    1.8e-17   63.7   0.0    3.5e-17   62.8   0.0    1.5  1  Methyltransf_11  Methyltransferase domain
    3.2e-14   53.5   0.0    5.7e-14   52.7   0.0    1.4  1  Methyltransf_12  Methyltransferase domain
      2e-13   50.8   0.0    3.3e-13   50.2   0.0    1.3  1  Methyltransf_25  Methyltransferase domain
    2.3e-13   50.2   0.0    3.2e-13   49.7   0.0    1.2  1  Methyltransf_31  Methyltransferase domain
    2.8e-05   23.7   0.0    4.3e-05   23.1   0.0    1.2  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
    0.00062   19.3   0.0     0.0011   18.5   0.0    1.3  1  MTS              Methyltransferase small domain
     0.0011   18.4   0.0     0.0017   17.7   0.0    1.3  1  CMAS             Mycolic acid cyclopropane synthetase
     0.0019   17.7   0.0     0.0029   17.2   0.0    1.2  1  Methyltransf_PK  AdoMet dependent proline di-methyltransferas
      0.003   16.5   0.0     0.0044   16.0   0.0    1.1  1  Methyltransf_9   Protein of unknown function (DUF1698)
     0.0038   16.6   0.0     0.0058   15.9   0.0    1.2  1  Methyltransf_2   O-methyltransferase domain
      0.004   16.8   0.0     0.0057   16.3   0.0    1.2  1  NodS             Nodulation protein S (NodS)
  ------ inclusion threshold ------
      0.029   14.3   0.0       0.04   13.9   0.0    1.2  1  Methyltransf_32  Methyltransferase domain
      0.059   12.5   0.0       0.09   11.9   0.0    1.2  1  DREV             DREV methyltransferase


Domain annotation for each model (and alignments):
>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.2   0.0   3.4e-23   4.3e-20      20     157 ..     115     271 ..      82     276 .. 0.79

  Alignments for each domain:
  == domain 1  score: 72.2 bits;  conditional E-value: 3.4e-23
  Methyltransf_23  20 lraggrvLdiGcGtGillevl.rengf.svtgvDlspeaveiae.............kakkaqkdqfdeqeaaepqgkfdlIvlrevlehvpdp 98 
                      ++++  +Ld+GcG Gi++e++ r   + svt++D+sp  ++ a+             + ++   +++  q  +  ++++d+ +l+ev+eh+ +p
       KHJ32025.1 115 ENQKLDYLDVGCGGGIFAESIaRLSNVrSVTAIDPSPDVIAVAKaharrdpilkerlNYRNITIESM--QIPTSTADQYDVLTLFEVIEHITYP 206
                      345559***************5455556**********99999899999888886553333333333..44555788***************** PP

  Methyltransf_23  99 pellrqiatllkpgGylllseplasl....kedrllldwlylvpagrhi..sffsarslkellee 157
                       e l +  + ++pgG+++ls++++ +         ++++l +vpag+h   ++++ ++l  +++e
       KHJ32025.1 207 SEFLEKCTKFVRPGGWIVLSTVARTWlswlTTIAVAEHVLHIVPAGTHNweKYINPDELSCWFRE 271
                      **********************9986544333334666788899999999999999999999876 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.8   0.0   2.8e-20   3.5e-17       1      96 []     122     225 ..     122     225 .. 0.92

  Alignments for each domain:
  == domain 1  score: 62.8 bits;  conditional E-value: 2.8e-20
                      EEET-TTSHHHHHHHHTT..SEEEEEES-HHHHHHHHHHCCHHT-...EEEETTEECCCTSS-TT...-EEEEEEES-CCC-CCHHHHHHHHHH CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg..arvvgvDlskemlklakekaseegl...kvefvvadaeklpfedn...sfDlvvssevlhhvedpekalkeiaR 86 
                      LdvGcG+G++ae +a+    ++v+++D+s+ ++++ak++a+++++   +++++  ++e+++++ +   ++D+ +++ev++h+  p+++l+++ +
       KHJ32025.1 122 LDVGCGGGIFAESIARLSnvRSVTAIDPSPDVIAVAKAHARRDPIlkeRLNYRNITIESMQIPTStadQYDVLTLFEVIEHITYPSEFLEKCTK 215
                      8**************77677****************************999*******87665543349************************* PP

                      HEEEEEEEEE CS
  Methyltransf_11  87 vLkpgGllvi 96 
                       ++pgG++v+
       KHJ32025.1 216 FVRPGGWIVL 225
                      *******985 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.7   0.0   4.4e-17   5.7e-14       1      99 []     122     223 ..     122     223 .. 0.86

  Alignments for each domain:
  == domain 1  score: 52.7 bits;  conditional E-value: 4.4e-17
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg....ssfDlvvasnvlhhlkdirevldnir 90 
                      L++GcG G +++ +++     ++t++D+sp++i+ ak++ + r++   ++++++++ +++ + +    +++D+ ++++v++h+  + e+l+++ 
       KHJ32025.1 122 LDVGCGGGIFAESIARLSNVRSVTAIDPSPDVIAVAKAHAR-RDPILKERLNYRNITIESMQIPtstaDQYDVLTLFEVIEHITYPSEFLEKCT 214
                      8***************97777888*********55555554.455566888888888877777789999************************* PP

  Methyltransf_12  91 klLkpgGrl 99 
                      k ++pgG++
       KHJ32025.1 215 KFVRPGGWI 223
                      *******86 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.0   2.6e-16   3.3e-13       2      97 .]     122     221 ..     122     221 .. 0.88

  Alignments for each domain:
  == domain 1  score: 50.2 bits;  conditional E-value: 2.6e-16
                      EEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT...TEEEEESBCCGBS...SSTTTEEEEEEESTGGGSSHHHHHHHHHHH CS
  Methyltransf_25   2 LdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl...nvefvqgdaedlp...fedgsfDlvvssgalhhlsdedlekalkei 89 
                      Ld+GcG G +++ +a+  +  +vt++D+s++ ++ a+++a+++ +   ++++++  +e+++     ++++D+ +++ +++h++ +   ++l+++
       KHJ32025.1 122 LDVGCGGGIFAESIARLSNVRSVTAIDPSPDVIAVAKAHARRDPIlkeRLNYRNITIESMQiptSTADQYDVLTLFEVIEHITYPS--EFLEKC 213
                      8**************99889********************9976688889998888888652234677*******877***99665..9***** PP

                      HHHEEEEE CS
  Methyltransf_25  90 arvLkpgG 97 
                       + ++pgG
       KHJ32025.1 214 TKFVRPGG 221
                      *******9 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.7   0.0   2.5e-16   3.2e-13       2     123 ..     116     241 ..     115     276 .. 0.74

  Alignments for each domain:
  == domain 1  score: 49.7 bits;  conditional E-value: 2.5e-16
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgld..nveFeqgdieeleklled...ekfDlilsnevlnaladp 90 
                      +++l +lD+GCG G ++  +a +l     v+ iD s+++i +A+++a++  +   +++ +   ie+++        +++D+++ +ev+ +++ p
       KHJ32025.1 116 NQKLDYLDVGCGGGIFAESIA-RLSNVRSVTAIDPSPDVIAVAKAHARRDPILkeRLNYRNITIESMQI--PTstaDQYDVLTLFEVIEHITYP 206
                      577899***************.5544455****************877776653344444444444332..222339***************** PP

  Methyltransf_31  91 dkileeiervlkpggilliedpr..llaelpakve 123
                       ++le+ ++ ++pgg ++++++   +l++l  ++ 
       KHJ32025.1 207 SEFLEKCTKFVRPGGWIVLSTVArtWLSWLTTIAV 241
                      *********************99764444443333 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   3.3e-08   4.3e-05     164     261 ..     120     228 ..     103     251 .. 0.75

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 3.3e-08
        PrmA 164 evlDvGtGSGiLaiaaakL.gakkvvavDiDevAvkvakeNaelNkvea.klev.al...seellk..eekadviv.aNILaevl..ielaedikklvk 251
                   lDvG+G Gi a   a+L + ++v+a+D  +  + vak+ a++  + + +l+  ++   s ++++  + ++dv+    ++ ++    e++e+ +k+v+
  KHJ32025.1 120 DYLDVGCGGGIFAESIARLsNVRSVTAIDPSPDVIAVAKAHARRDPILKeRLNYrNItieSMQIPTstADQYDVLTlFEVIEHITypSEFLEKCTKFVR 218
                 789**********999999346899******************997765455442121113333324568899985145555554334899******** PP

        PrmA 252 eggllilSGi 261
                 +gg+++lS +
  KHJ32025.1 219 PGGWIVLSTV 228
                 *******976 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   8.8e-07    0.0011      28      78 ..     114     164 ..     110     193 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 8.8e-07
                 HCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHT CS
         MTS  28 pkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenlean 78 
                 +++++ + lD+GcG G+ + ++a+ s+  +vt++d +   +++ak+ +++ 
  KHJ32025.1 114 DENQKLDYLDVGCGGGIFAESIARLSNVRSVTAIDPSPDVIAVAKAHARRD 164
                 56667789************************************9988765 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.3e-06    0.0017      66     177 ..     121     238 ..     112     265 .. 0.62

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.3e-06
                 EEEES-TTSHHHHHHHHHH--EEE.EEES-HHHHHHHHHHHHT......S-SSS-EEEEES-G.GG-----SEEEEES-GGGTSGGGHHHHHHHHHHHS CS
        CMAS  66 lLdiGcGWGslvrraverydvkvv.glTlSkeqaklakkrvde......ldlerkvevklldy.edldekvdrvvsvgafehvgkenydtffkklkkll 156
                  Ld+GcG G  +   ++  +v+ v ++  S +  ++ak++  +      + + r+ +++ ++     ++++d +  ++++eh+ +    +f +k++k +
  KHJ32025.1 121 YLDVGCGGGIFAESIARLSNVRSVtAIDPSPDVIAVAKAHARRdpilkeRLNYRNITIESMQIpTSTADQYDVLTLFEVIEHITYP--SEFLEKCTKFV 217
                 59*****8888888888866654314445655555555443320000002222333343333312334477777777777777654..48********* PP

                 -TT-EEEEEEEEE--HHHHHC CS
        CMAS 157 kedGllllhtitslhkkelae 177
                 +++G ++l t+ ++  ++l++
  KHJ32025.1 218 RPGGWIVLSTVARTWLSWLTT 238
                 **********98876666654 PP

>> Methyltransf_PK  AdoMet dependent proline di-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.2e-06    0.0029      46     159 ..     108     225 ..     101     231 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2.2e-06
  Methyltransf_PK  46 kkeslpgkrevkvaldcGaGiGrvtknlL.lkllskvDlvepvekflekakeelae.....ekkkvgkvyvvglqeftPeegrYdliWiqWcvg 133
                      +++  +++++ +  ld+G+G G  ++++  l+ ++ v  ++p  ++++ ak +  +     e+ + +++ + ++q  t  +++Yd++    ++ 
       KHJ32025.1 108 NSDPRIDENQKLDYLDVGCGGGIFAESIArLSNVRSVTAIDPSPDVIAVAKAHARRdpilkERLNYRNITIESMQIPTSTADQYDVLTLFEVIE 201
                      555567788888999*****999999885367789999999999999988866555666658899999************************** PP

  Methyltransf_PK 134 hLtDedlvaflkrckkalkpnGlivv 159
                      h+t     +fl++c+k ++p+G iv+
       KHJ32025.1 202 HITYPS--EFLEKCTKFVRPGGWIVL 225
                      ***875..9***************98 PP

>> Methyltransf_9  Protein of unknown function (DUF1698)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   3.4e-06    0.0044     111     220 ..     113     228 ..     108     231 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 3.4e-06
                     S.--TT-EEEEET-TTSHHHHHHHH.CT-SEEEEE---HHHHHHHHHHHC.CTTTTSSEEEE---GGGS-T....---EEEEEEES-GGG-S-HH CS
  Methyltransf_9 111 lsdlkgrtildvGcgnGyhlwrmvg.egaklvvGidPselfliqfeavrk.llgedqrahllplgieqlpe....leafdtvfsmGvlyhrrsPl 199
                     + + ++   ldvGcg G +   ++   + ++v  idPs   +   +a  +     ++r +   ++ie ++      + +d++ +  v+ h   P 
      KHJ32025.1 113 IDENQKLDYLDVGCGGGIFAESIARlSNVRSVTAIDPSPDVIAVAKAHARrDPILKERLNYRNITIESMQIptstADQYDVLTLFEVIEHITYPS 207
                     5555666789********9987765257789999***998888877754413334556666668888776432446789**************** PP

                     HHHHHHHCTEEEEEEEEEEEE CS
  Methyltransf_9 200 dhllqlkdqlvkgGelvletl 220
                     + l +  + ++ gG +vl t+
      KHJ32025.1 208 EFLEKCTKFVRPGGWIVLSTV 228
                     ******************986 PP

>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   4.6e-06    0.0058      67     164 ..     122     225 ..     113     234 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.6e-06
                     EEET-TTSHHHHHHHHH-TT-EEEEEE.-HHHHHHHHHHS..-----TTEEEEES-TTTS---..--SEEEEESSGGGS-HH.HHHHHHHHHHHH CS
  Methyltransf_2  67 vDvGGGtGalakaivsayPtikvivfD.lpeVveaAkehl..sageeervefvgGdffkdslP..eaDaillkrvlhDwsde.kcvklLkrvkka 155
                     +DvG G G +a+ i+++    +v+  D  p+V++ Ak h   ++ ++er+++ +  +   ++P  +aD + +  +    ++    +++L+++ k 
      KHJ32025.1 122 LDVGCGGGIFAESIARLSNVRSVTAIDpSPDVIAVAKAHArrDPILKERLNYRNITIESMQIPtsTADQYDVLTLFEVIEHItYPSEFLEKCTKF 216
                     6**************************569*******9986678899***********9****777887766554444444314589******** PP

                     --TT-EEEE CS
  Methyltransf_2 156 lpagGkviv 164
                     +++gG +++
      KHJ32025.1 217 VRPGGWIVL 225
                     *****9987 PP

>> NodS  Nodulation protein S (NodS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   4.5e-06    0.0057      46     166 ..     120     247 ..     112     258 .. 0.64

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 4.5e-06
        NodS  46 dalevGcaaGalterlapyc..krltvvdvveeaiararervke....sshiswivsdvqqf....stdekfdlivvaevlyyiedvaelraavrnlvs 134
                 d l+vGc  G ++e +a ++  +++t +d  ++ ia a+   ++    +  +++    ++ +    st +++d++   ev+ +i+   e+   ++   +
  KHJ32025.1 120 DYLDVGCGGGIFAESIARLSnvRSVTAIDPSPDVIAVAKAHARRdpilKERLNYRNITIESMqiptSTADQYDVLTLFEVIEHITYPSEF---LEKCTK 215
                 789**************98733589999987776554443333300112345554444444322447889*********98877766554...666667 PP

        NodS 135 llapdgqlvfGsardavcrrwGhvaGaetvla 166
                 +++p+g +v+ +           +a ae vl 
  KHJ32025.1 216 FVRPGGWIVLSTVARTWLSWLTTIAVAEHVLH 247
                 77777777765444333333345566666665 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   3.1e-05      0.04      21      96 ..     113     185 ..      89     227 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.1e-05
  Methyltransf_32  21 akesgaltvvDvGaGkgYLsfvlalkekeyklkvvgidakeelvekaekraeklgkkfnkrlsfaelsieeatssk 96 
                       +e+++l+ +DvG+G g  +  +a     +  +v++id + ++++ a++ a++    +++rl+  + +ie+ + ++
       KHJ32025.1 113 IDENQKLDYLDVGCGGGIFAESIAR--LSNVRSVTAIDPSPDVIAVAKAHARRDP-ILKERLNYRNITIESMQIPT 185
                      578999******************9..335569**************99999876.77788888888888776554 PP

>> DREV  DREV methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     7e-05      0.09      95     189 ..     118     228 ..     106     259 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7e-05
        DREV  95 dkklldlGaGdGeitkrvaptfee...........vyatelsetmrdrl..kkkkynvlsalelq...etdvkldlilclnlldrcfdplklledirsa 177
                 +   ld+G G G  ++ +a   +            v a   ++  rd +  ++++y+ +++  +q    t  ++d+++ +++++    p ++le   + 
  KHJ32025.1 118 KLDYLDVGCGGGIFAESIARLSNVrsvtaidpspdVIAVAKAHARRDPIlkERLNYRNITIESMQiptSTADQYDVLTLFEVIEHITYPSEFLEKCTKF 216
                 456799999999888888765544667888899998888777777776522357999999988764446889*************************** PP

        DREV 178 lepngrvivalv 189
                  +p g ++++ v
  KHJ32025.1 217 VRPGGWIVLSTV 228
                 ********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2248.58
//
Query:       KHJ32026.1  [L=235]
Description: putative 40s ribosomal protein s6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.1e-54  182.3   0.2    5.9e-54  181.4   0.0    1.6  2  Ribosomal_S6e  Ribosomal protein S6e
  ------ inclusion threshold ------
       0.27   11.3   2.2       0.55   10.3   2.2    1.5  1  Gas_vesicle_C  Gas vesicles protein GVPc repeated domain
       0.75    8.8   6.9       0.95    8.5   6.9    1.1  1  Atg14          Vacuolar sorting 38 and autophagy-related subu


Domain annotation for each model (and alignments):
>> Ribosomal_S6e  Ribosomal protein S6e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.4   0.0   9.8e-58   5.9e-54       8     125 .]       4     122 ..       1     122 [. 0.99
   2 ?   -2.7   0.0      0.92   5.5e+03      92      97 ..     194     199 ..     166     223 .. 0.55

  Alignments for each domain:
  == domain 1  score: 181.4 bits;  conditional E-value: 9.8e-58
                    TTTTEEEEEE-.CHHHCTTCTT-BSSEEEECCTTTSSSTS-EEEEEEEEETTC-BB-TTS-SSSEEEEEEETTSSSS-SSSSS-EEEEEEE-SB-- CS
  Ribosomal_S6e   8 patgkqkliev.dekklrtligkrigeevdgdalGeelkgyvlkitggsdkqGfpmkqgvltpgrvrlLlskggvgyrprrkGerkrksvrGcivs 102
                    pa+g+qklie+ de+klr +++kr+g ev gd++ +e+kgy+++itgg+dkqGfpmkqgv++p+rvrlLls+g+++yrprr+GerkrksvrGciv+
     KHJ32026.1   4 PANGSQKLIEIdDERKLRVFMDKRMGAEVPGDSVSDEFKGYIFRITGGNDKQGFPMKQGVMHPTRVRLLLSDGHSCYRPRRTGERKRKSVRGCIVA 99 
                    89********************************************************************************************** PP

                    SSEEEEEEEEEE--SS--TTTSS CS
  Ribosomal_S6e 103 adisqlnlvivkkgekdiegltd 125
                     d+s+l+l ivk+ge+di+gltd
     KHJ32026.1 100 MDLSVLALSIVKQGENDIPGLTD 122
                    **********************8 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.92
                    EEEEEE CS
  Ribosomal_S6e  92 krksvr 97 
                    +r   r
     KHJ32026.1 194 RRNAER 199
                    333333 PP

>> Gas_vesicle_C  Gas vesicles protein GVPc repeated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   2.2   9.2e-05      0.55      17      32 ..     212     227 ..     211     227 .. 0.93

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 9.2e-05
  Gas_vesicle_C  17 kaRtaQAkaQAqeLrq 32 
                    ++R+a AkaQ+++Lr+
     KHJ32026.1 212 AKRIAEAKAQKADLRK 227
                    58************97 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   6.9   0.00016      0.95      58     134 ..     158     234 ..     138     235 .] 0.91

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00016
       Atg14  58 ledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklkkRrsdleslqneleerrkkqia 134
                  + k + kk + +  k+++ ++ +rlq  ++++   ++  e +k    ++ + l+kR +++++ +  l++rr+++++
  KHJ32026.1 158 VQPKGEGKKPYTKAPKIQRLITPQRLQHKRHRIALKRRNAERTKDAANEYAALLAKRIAEAKAQKADLRKRRASSMR 234
                 5677788889999999*********************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1823.49
//
Query:       KHJ32027.1  [L=1260]
Description: putative int1 protein bud site selection protein bud4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-12   47.2   1.6    8.6e-12   45.7   0.4    2.4  2  Anillin   Cell division protein anillin
    1.3e-09   38.5   0.1    8.5e-09   35.9   0.0    2.6  2  PH        PH domain
  ------ inclusion threshold ------
      0.024   15.1   0.0        0.1   13.1   0.0    2.1  1  PH_11     Pleckstrin homology domain


Domain annotation for each model (and alignments):
>> Anillin  Cell division protein anillin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.55   3.3e+03      53      81 ..     727     761 ..     716     806 .. 0.63
   2 !   45.7   0.4   1.4e-15   8.6e-12       5     141 .]     955    1082 ..     952    1082 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.55
     Anillin  53 vdrtegtdlcFedpivl.......snvppdFeidve 81 
                  d   +++  F+++++l        n+++dFe  ++
  KHJ32027.1 727 EDTL-HEQPGFKRSLTLdisndlsLNLDNDFERVIQ 761
                 4444.8888899999995555555566666665554 PP

  == domain 2  score: 45.7 bits;  conditional E-value: 1.4e-15
     Anillin    5 vtisdirlpLkkkdvesfknkgese...erfavfcllki.gteivatdlvstvdrt............egtdlcFedpivlsnvppdFeidvevYsl 85  
                  +t+s+++ ++kk+++ ++++++e++   ++  +   +k  + e++a+dl+s+  ++            ++++lcF++p+v+         +v ++++
  KHJ32027.1  955 STFSRVFTSPKKRKELEARQREEEQqyaKQREFESKMKKsSMEPTAWDLLSPFTSEngsfarsyvclkDHESLCFGRPYVV---------EVSCFNE 1042
                  79**********************999966667777777699***************************************.........******* PP

     Anillin   86 rvleedlslsstprklatklsskskslsrspgkklaargskFkllGsltltlssvg 141 
                  +++e+     ++p+++ +k +s + +++r+p          +k+ ++l+l+l++v+
  KHJ32027.1 1043 WATEQI----NKPSSVMSKRTS-TFVQRRAP----------YKV-AKLELQLLFVP 1082
                  ***998....777777776665.44566888..........**9.*******9985 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0         3   1.8e+04      39      58 ..     203     222 ..     193     245 .. 0.73
   2 !   35.9   0.0   1.4e-12   8.5e-09       4     104 ..    1115    1231 ..    1112    1232 .. 0.88

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 3
                 TTESSEEEEEESTTEEEEEE CS
          PH  39 ekdkepkgsislsncevvev 58 
                  +  +pk s++ls+ + +e+
  KHJ32027.1 203 LSTCRPKSSLNLSSGSRSED 222
                 66778888888888777664 PP

  == domain 2  score: 35.9 bits;  conditional E-value: 1.4e-12
                  EEEEEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEEC.......................TT.SSSSTSEEEEEEST CS
          PH    4 eGwLlkkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevva.......................te.dpkrkfcfelrive 76  
                  eG L+++g++    w++r+f L++++l  y ++      +p+ +i+l n+    ++                        +e ++  +  f++r++ 
  KHJ32027.1 1115 EGHLSQQGGDCP-YWRRRYFKLSGNKLTAYHES----TRQPRVTINLGNACKLIDDRsiltqkettgrggkrrksgfaeeEEgYMFVEEGFRIRFN- 1205
                  899*********.********************....99999999999998888777899999998888888888877663336667777777999. PP

                  SSSTEEEEEEESSHHHHHHHHHHHHHHH CS
          PH   77 rngsrtyllqasseeerkeWikaiqsai 104 
                   ng + + ++a+s+ e+++W++a+ ++i
  KHJ32027.1 1206 -NG-EIIDFYADSPAEKEAWMRALDACI 1231
                  .99.********************9987 PP

>> PH_11  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.7e-05       0.1       3     102 ..    1116    1227 ..    1114    1229 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.7e-05
       PH_11    3 Gylkkkgsk..aWkrrwfavlkdgvLeyYksekkkvvkhviklSngseaklkadlisaalf....kidsirs........sksddllleistetkif 85  
                  G l ++g+    W+rr+f +l   +L  Y++++ +  +  i l n  + +  +++  ++ +     ++++ +           ++ + + +++ +i+
  KHJ32027.1 1116 GHLSQQGGDcpYWRRRYF-KLSGNKLTAYHESTRQP-RVTINLGNACKLIDDRSILTQKETtgrgGKRRKSGfaeeeegyMFVEEGFRIRFNNGEII 1210
                  555556655678******.***********999998.888888888888888888888777788734444446444444445555666667777779 PP

       PH_11   86 flkgdsneeteeWveal 102 
                   +++ds  e+e+W++al
  KHJ32027.1 1211 DFYADSPAEKEAWMRAL 1227
                  99************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       900  (0.050198); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.78u 0.27s 00:00:01.05 Elapsed: 00:00:00.45
# Mc/sec: 8486.72
//
Query:       KHJ32028.1  [L=183]
Description: putative sister chromatid cohesion protein ctf8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-41  140.2   0.0    6.6e-41  140.0   0.0    1.1  1  Ctf8      Ctf8
  ------ inclusion threshold ------
       0.11   13.0   0.0       0.17   12.4   0.0    1.2  1  DUF123    Domain of unknown function DUF123


Domain annotation for each model (and alignments):
>> Ctf8  Ctf8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.0   0.0   7.3e-45   6.6e-41       1     142 []      25     175 ..      25     175 .. 0.91

  Alignments for each domain:
  == domain 1  score: 140.0 bits;  conditional E-value: 7.3e-45
        Ctf8   1 llqtpsglalLElQGtinlpekekeeaeees............vsdeakaqetveevkiGrldfpdyspeae.dtkwmkrvyLyvgkhQrLtGevkkLa 86 
                 ll+ psglalLElQG +n+p+++++ + +++             ++e +++++ +   iGrl fpdy++++  +t+wmk+vyLyvg +Q+LtGev kL+
  KHJ32028.1  25 LLRIPSGLALLELQGALNIPASHDTIEVDNAidgdcddpqgvgLKSELNSRSSPKGLLIGRLLFPDYDENNAcNTAWMKKVYLYVGSYQKLTGEVTKLP 123
                 6899*******************9999999999*********999999999999**************99999************************** PP

        Ctf8  87 kplavlrrrksekkeeeeeeeekeeeksseeeseeeleivdivkykiifssrPePv 142
                 k++av++++ks+++e+ +      + +++ e+++ +leivdi+kyki+fs+rPePv
  KHJ32028.1 124 KAIAVVQKKKSNTQERIDV----ITGNEEMEKTSVQLEIVDIIKYKILFSNRPEPV 175
                 *********7766654333....344445778888********************8 PP

>> DUF123  Domain of unknown function DUF123
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.9e-05      0.17       5      57 ..     103     155 ..     100     167 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.9e-05
      DUF123   5 kgvylYvGsalgsgglasRvkrHaslskkkekklhWhiDyLleseeaelaevv 57 
                 k vylYvGs  + +g  +++ + +++ +kk+++++  iD ++ +ee+e ++v 
  KHJ32028.1 103 KKVYLYVGSYQKLTGEVTKLPKAIAVVQKKKSNTQERIDVITGNEEMEKTSVQ 155
                 578*******99887559****************************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       620  (0.0345808); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1353.80
//
Query:       KHJ32029.1  [L=133]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      228  (0.0127168); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 950.20
//
Query:       KHJ32030.1  [L=406]
Description: hypothetical protein EV44_g3708 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.14   12.3   0.6       0.32   11.1   0.6    1.7  1  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.6   1.8e-05      0.32       3      15 ..     278     290 ..     276     290 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 1.8e-05
                 TSSSSSSSSTTTT CS
     zf-CCHC   3 CynCGepGHiard 15 
                 C  CGe GH ard
  KHJ32030.1 278 CIACGENGHSARD 290
                 557*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       636  (0.0354733); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2866.35
//
Query:       KHJ32031.1  [L=714]
Description: putative heat shock protein hsp88 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   4.5e-171  570.1   1.0   4.5e-171  570.1   1.0    1.7  2  HSP70     Hsp70 protein
    1.4e-14   53.6   0.0    4.8e-14   51.9   0.0    1.8  2  MreB_Mbl  MreB/Mbl protein
  ------ inclusion threshold ------
      0.023   14.8   0.7       0.95    9.7   0.0    3.3  3  YonK      YonK protein


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  570.1   1.0  7.5e-175  4.5e-171       1     597 [.       3     652 ..       3     654 .. 0.95
   2 ?   -3.9   3.9      0.46   2.8e+03     518     578 ..     667     697 ..     652     713 .. 0.26

  Alignments for each domain:
  == domain 1  score: 570.1 bits;  conditional E-value: 7.5e-175
                 EEEEEEXSSEEEEEEEETTEEEEEXXTTSXSSEESEEEEXTTSEEETHHHHHCTTTTGGGEEEXGGGTTTXBTTSHHHHHHHTTXSSEEEEETTSBEEE CS
       HSP70   1 viGiDLGttnsvvavmeggkievianeegnrttPsvvaFtkkerlvGeaAkrqavtnpkntvfsvKrliGrkfsdpevqkeikelpykvvkkengkavv 99 
                 v+G+D Gt  sv+av+++++++vi+ne +nr+tPs+v+F++k r++GeaAk+q ++n kntv s+Krl Gr++sd++vq e + ++  +    ng++++
  KHJ32031.1   3 VVGLDFGTAGSVIAVARNRGVDVITNEVSNRSTPSLVGFGPKSRYIGEAAKTQEISNLKNTVSSLKRLAGRQLSDSDVQIEQTYVSAPLIDI-NGQVGA 100
                 79***************************************************************************************998.****** PP

                 EEEETTE..EEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCCSS......SCEEEEE CS
       HSP70 100 eveaage..kftpeqisamvLkklketaeaylgkkvtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldkkd......kernvlv 190
                 ev++ g+  ++t++q+ +m+L+k+k+ta+a l+ +v+d+v++vPa+f+d+qR++ kdA++iAGL+ lR++N++TAaal YG+ k d      k+r+v++
  KHJ32031.1 101 EVTYLGKreRYTATQLVSMFLNKIKSTASAELNLPVSDIVMSVPAWFTDSQRRSLKDAAEIAGLKLLRLINDTTAAALGYGITKLDlpgpeeKPRIVAF 199
                 ******999**********************************************************************************9******* PP

                 EEEXSSXEEEEEEEEETTEEEEEEEEEETTXSHHHHHHHHHHHHHHHHHHHHSXXGGGSHHHHHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTTEEE CS
       HSP70 191 yDlGggtfdvSilelekGvfevkaTagDthlGGedfDealvehlveefkkkegidlskdkkalqrlkeaaekaKkeLSsskqteinleietvdedgkdl 289
                 +D+G++ +++Si++++kG + vk+Ta+D h+GG+dfD+alv+hl++efk++++id+++++ka+ r++ aaek+Kk LS+  +++++l+ie++++ ++d+
  KHJ32031.1 200 IDIGHSNYTCSIVQFKKGELVVKSTAYDRHFGGRDFDKALVDHLAKEFKENYKIDIKSNPKAMVRVSAAAEKLKKILSA--NQQAPLNIESLMD-DVDV 295
                 *******************************************************************************..8999*********.**** PP

                 EEEEEHHHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTTCHHBSSSHTTTHHHHHHHHHHHHHCTCGCSHCCEEEE CS
       HSP70 290 seklsRakfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfgkepsktvnpDeavaiGAAvqagvlsgeeevkdllllD 388
                  + ++R+ +e+lve+ller+  p+e+al++a+lk+e+id v+lvGG +R+P+++++++++f+k +s t+n+Dea+a+G+A+ +++ls+ ++v+++++ D
  KHJ32031.1 296 ATMMTRESLEKLVEPLLERVHLPLERALAEANLKVEDIDVVELVGGCSRVPALKDRIQKFFNKTLSFTLNQDEAIARGCAFSCAILSPVFRVREFSIHD 394
                 *************************************************************************************************** PP

                 BESS-EEEEETTTEEEEEESTTC...BSSEEEE.EEEEESSTTSS.SEEEEEEESSSSBGGGS..EEEEEEEEE.....CESSCSTTCSEEEEEEEEET CS
       HSP70 389 vtpLslgietlggvmtkliernt...tiptkks.qvfstaadnqt.aveievlqgerelvkdn..kllgsfeld.....gippaprGvpqieVtfdida 475
                 + +  + ie+ +++  +++e+ t   ++ + ++ +++++++++++ +++ e+ ++++el++      +g+f+++     +++  +    + + + +i+ 
  KHJ32031.1 395 IAS--YPIELIWEKDPEIEEEDTnlvVFQKGNNmPSTKILTFHRKgPFQFEARYAKPELLPGDtkPWIGNFSVKenafkDVKVNKGDFLTCKMKTRINL 491
                 *99..********987777666522244555557999********9**************9765678****9972222246644444788999****** PP

                 TSCEEEEEEETTTCCEEEEEEECCSSSBHHHHHH..................................HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH CS
       HSP70 476 nGiltvsakdketgkeeeitieaseglseeeiek..................................mvkdaeesaeedkkkkeaieakneaeelvys 540
                 +Gi+++++ +  +++e e++i  ++g +++++e                                     +++ +++ edk   ++ e+kne+e+++y+
  KHJ32031.1 492 DGIVNIEQGYIVEEVEIEEPIPDETGKESDAMETdekpktrkvikqvrkgdlpvisatfsldestklhYTEQEASMTMEDKLVSDTEEKKNELESFIYD 590
                 ************************998888888889******************************9989999999*********************** PP

                 HHHHHHHH.GGGSTHHHH....HHHHHHHHHHHCHTTSSCHHHHHHHHHHHHHHHHHHHHHH CS
       HSP70 541 lekkleee.aekvseaek....ekvesaieeLkeeleeeekeeieakteelkkvvekiaekl 597
                 l++k++++ a++ se+ek    +k++s++++L++e+e++ k+ + ak+ee+++++ +ia+++
  KHJ32031.1 591 LRNKINDQyADFSSEEEKakllDKLTSSEDWLYDEGEDATKAVYIAKMEEIQTLSGPIAQRY 652
                 ********889988888899999**********************************99987 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 0.46
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHHHHHHHHHCHTTSSCHHH CS
       HSP70 518 aeedkkkkeaieakneaeelvyslekkleeeaekvseaekekvesaieeLkeeleeeekee 578
                 a+++++kk+++ + ++  +l+++++                              ++++e+
  KHJ32031.1 667 ADAEAAKKREMAEAAKKAALAQEAA------------------------------AKKEES 697
                 1111111111111111111111111..............................111111 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.21   1.2e+03       4      22 ..       4      23 ..       2      39 .. 0.70
   2 !   51.9   0.0   8.1e-18   4.8e-14      75     316 ..     114     375 ..     109     382 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.21
                EEEEE-SSEEEEEE.TTTEE CS
    MreB_Mbl  4 lgiDLGtantlvyv.kgkgi 22
                +g+D Gta  ++ v +++g+
  KHJ32031.1  4 VGLDFGTAGSVIAVaRNRGV 23
                799*****988854255654 PP

  == domain 2  score: 51.9 bits;  conditional E-value: 8.1e-18
                 HHHHHHHHHHHHT....SS-SS--EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT-.......-TTSSS-EEEEEE-SS-EEEEEE CS
    MreB_Mbl  75 eellkyfikkvkk....kkslskprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGagl.......pveepsgnmvvdiGggttevavi 162
                  +l+  f++k+k+    + +l+ + +v++vP   t+ +rr +k+aa+ aG +   li+++ aAA+G g+       p e+p+    +diG     ++++
  KHJ32031.1 114 TQLVSMFLNKIKStasaELNLPVSDIVMSVPAWFTDSQRRSLKDAAEIAGLKLLRLINDTTAAALGYGItkldlpgPEEKPRIVAFIDIGHSNYTCSIV 212
                 4555566666655332266678899*****************************************986433332223555556679***998888887 PP

                 ET..TEEEEEEEE...S-SHHHHHHHHHHHHHHHH..SEE--HHHHHHHHHHH-BSS--HHHH.EEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHH CS
    MreB_Mbl 163 sl..ggivtsksv...rvaGdeldeaiikyirkky..nlliGertaekikieigsavkeeeee.kmeikGrdlvtglpkevevsseevrealkepvsai 253
                  +  g++v++++    + +G ++d+a+++++ k++  n  i  ++  k  +++++a+++ ++  + + +    ++ l   v v + + re+l++ v+ +
  KHJ32031.1 213 QFkkGELVVKSTAydrHFGGRDFDKALVDHLAKEFkeNYKIDIKSNPKAMVRVSAAAEKLKKIlSANQQAPLNIESLMDDVDVATMMTRESLEKLVEPL 311
                 653277877665434479************988873346677777777777777777665555577778888899************************ PP

                 HHHHHHHHHTS-HHHHHHHHHH-EE.EESGGGGSBTHHHHHHHHHSS-EEE-SSTTTHHHHHHH CS
    MreB_Mbl 254 veavkevLektppeLaadivdrgiv.ltGGgallkgldkllseetglpvkvaedpltcvakGtg 316
                 +e v+  Le++ +e    + d  +v l+GG++ +  l++ +++ ++   + + +  +++a+G++
  KHJ32031.1 312 LERVHLPLERALAEANLKVEDIDVVeLVGGCSRVPALKDRIQKFFNKTLSFTLNQDEAIARGCA 375
                 **************999999977655*********************99999999999999986 PP

>> YonK  YonK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00016      0.95      11      57 ..     324     370 ..     321     373 .. 0.92
   2 ?    1.3   0.1     0.064   3.9e+02       3      25 ..     484     505 ..     482     511 .. 0.82
   3 ?   -1.7   0.2      0.55   3.3e+03      23      35 ..     577     591 ..     548     601 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00016
        YonK  11 kkgildleemevteldkeeevvYdLseiLseydekevSiTikeeeel 57 
                 +++ l +e+  v+el  +   v  L++ ++++ +k++S T+  +e +
  KHJ32031.1 324 AEANLKVEDIDVVELVGGCSRVPALKDRIQKFFNKTLSFTLNQDEAI 370
                 567899************************************99977 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.064
        YonK   3 kktntisfkkgildleemevtel 25 
                 k +  i++  gi+++e+  ++e+
  KHJ32031.1 484 KMKTRINLD-GIVNIEQGYIVEE 505
                 566779999.**********995 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.55
        YonK  23 teldk..eeevvYdL 35 
                 te+ k   e + YdL
  KHJ32031.1 577 TEEKKneLESFIYDL 591
                 344443223456666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (714 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1619  (0.0903006); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.31s 00:00:01.04 Elapsed: 00:00:00.45
# Mc/sec: 4749.85
//
Query:       KHJ32032.1  [L=916]
Description: putative iswi chromatin-remodeling complex atpase isw2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-62  209.3   1.4    1.4e-61  208.2   1.4    1.6  1  SNF2_N      SNF2 family N-terminal domain
    2.1e-23   82.8   1.0      8e-23   80.9   0.0    2.6  3  Helicase_C  Helicase conserved C-terminal domain
    7.1e-07   29.4   0.0    7.1e-07   29.4   0.0    3.6  4  ResIII      Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
        3.5    7.4   7.3       0.27   11.0   0.8    2.3  2  Rrp44_CSD1  Rrp44-like cold shock domain


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  208.2   1.4   3.1e-65   1.4e-61      54     338 ..     149     437 ..     117     489 .. 0.87

  Alignments for each domain:
  == domain 1  score: 208.2 bits;  conditional E-value: 3.1e-65
                 TT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH.....------------- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxx RF
      SNF2_N  54 svrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkk.....mkkkntkvapkll 147
                 +   GiLaDemGLGKT+q+++l+++      +d+      + +gp+Li++P s+l +We+e++++v+s     ++++ +++     +k +++++  ++ 
  KHJ32032.1 149 QGMSGILADEMGLGKTIQTISLLAK----FREDA------NYLGPHLIIAPLSTLSNWEEEFKKWVPSIPFALYHGTPSERkiiyeKKLQKNFIGGRVS 237
                 6789********************2....22333......468********************************9999989999888888899999** PP

                 ----EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHTH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 148 adydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkllq 246
                 +++ vv+ t +++ ++a      s l++++w+ +++DEgh+lkns+sk   +++++ +  r ++tGTP+qn+l++l++Ll+fL +++f +++ f+++++
  KHJ32032.1 238 EKFPVVLSTPEIVIKDA------SSLSKIHWEIIIIDEGHRLKNSDSKFFRILRSFTSVTRFLITGTPLQNNLKELWSLLNFLLPNIFVNWEQFESWFD 330
                 **************999......9*************************************************************************99 PP

                 HHHH............HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH......................HHHHHH-HH. CS
                 xxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxx. RF
      SNF2_N 247 rpie............aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllk..rseaalksssksk. 330
                                 + +++ +++++ +lq+l+lrr+k+dve+ lP+k e+i++ +l+k++  +Yn +++  + ++++ l    +++ +++++ ks  
  KHJ32032.1 331 FSDLqdeegtqeflqdRIKQDLVQKIHLILQPLLLRRIKADVEHLLPRKREYILYAPLTKQQTDLYN-VISNTTADTRKYLVDtvIKQLTVNFQAKSLs 428
                 76656999******999999***********************************************.5555555555444430033444444433332 PP

                 H-.HHHHHH CS
                 xx.xxxxxx RF
      SNF2_N 331 ek.ilelll 338
                 ++ +le  +
  KHJ32032.1 429 SEiVLEDST 437
                 224555444 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.2   5.4e+03      51      83 ..     391     423 ..     365     444 .. 0.64
   2 ?   -3.4   0.1       2.7   1.2e+04      12      30 ..     452     470 ..     433     492 .. 0.56
   3 !   80.9   0.0   1.8e-26     8e-23       3     111 .]     623     735 ..     621     735 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.2
                 THHHHHHHHHHHHTTSSSEEEESGGGTSSSTST CS
  Helicase_C  51 pqnereeileqfnkgesdvLiatdvaerGidip 83 
                 +q +   ++++  ++++++L+ t + +  ++++
  KHJ32032.1 391 QQTDLYNVISNTTADTRKYLVDTVIKQLTVNFQ 423
                 333334667777777777888777766666665 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.7
                 HTTTTSEEEEEESSHHHHH CS
  Helicase_C  12 leeeggkilifvntidrle 30 
                 ++++++k+ i  n+++ ++
  KHJ32032.1 452 KTNKREKSSITQNSKNAFQ 470
                 3445555555555555443 PP

  == domain 3  score: 80.9 bits;  conditional E-value: 1.8e-26
                 HHHHHHHH.HHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSH CS
  Helicase_C   3 leallell.kleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlprnv 97 
                 ++ l +ll +l ++g+k+lif++++++l+   ++ +  ++ +v++++g+ +q+er++ +++fn + +++ +L++t+++++Gi++ ++++Vi fd ++n+
  KHJ32032.1 623 MLLLDRLLpELFKRGSKVLIFSQFKTQLDIlEDYANDLRNWNVCRIDGSVNQEERRQQIKKFNeDTSYRiFLLSTRAGGQGINLASADTVILFDSDWNP 721
                 566777778889****************876677766669***********************7677888***************************** PP

                 HHHHHHHTTSSSTT CS
  Helicase_C  98 tsyiqriGRtgRag 111
                 ++  q+ +R++R+g
  KHJ32032.1 722 QQDLQAQDRAHRIG 735
                 ************97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.4       1.4   6.4e+03      79      92 ..      51      66 ..      29     111 .. 0.50
   2 !   29.4   0.0   1.6e-10   7.1e-07      23     169 ..     149     299 ..     130     301 .. 0.80
   3 ?    1.0   2.8     0.082   3.7e+02      65     102 ..     460     508 ..     400     556 .. 0.72
   4 ?   -2.3   0.1      0.85   3.8e+03      86     108 ..     669     694 ..     616     787 .. 0.54

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.4
                GG......GEEEESSS CS
      ResIII 79 seayke..igkkvsgd 92
                 e++ +  + kk++++
  KHJ32032.1 51 GEQRRQklAAKKKKEN 66
                3332223311111111 PP

  == domain 2  score: 29.4 bits;  conditional E-value: 1.6e-10
                 TTSEEEEEESTTSTHHHHHHHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG...........GEEEESSS-B--..........-SEEEEE CS
      ResIII  23 rdkrglikmaTGtGKTlvaaklierllkkgkee.kflflvprkslleqtleefkkflseayke.......igkkvsgdkkka...kekdstnkkilvtt 110
                 +   g+++ + G GKT+  ++l +++++ +++    l+++p +s l+ ++eefkk+ ++   +       + k++ ++k ++     + s++  ++++t
  KHJ32032.1 149 QGMSGILADEMGLGKTIQTISLLAKFREDANYLgPHLIIAP-LSTLSNWEEEFKKWVPSIPFAlyhgtpsERKIIYEKKLQKnfiGGRVSEKFPVVLST 246
                 55678889999****************98877746666666.566689******9999987668889998555555555555666788999999***** PP

                 HHHHHHTH........HHHTTT-SEEEEETGGGTTS..TTTHHHHHT---SEEEEEESS- CS
      ResIII 111 iqsldadseeeeeeseellrdrfdviiiDEaHrlgak.kswreilekfkeavllglTATp 169
                  + + +d         +l++ + ++iiiDE Hrl+ + +++ +il++f + +++ +T+Tp
  KHJ32032.1 247 PEIVIKDA-------SSLSKIHWEIIIIDEGHRLKNSdSKFFRILRSFTSVTRFLITGTP 299
                 99999999.......8999999************997459*******************9 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.082
                 HHHHHHHHHGGGGTGG........GEEEESSS-B--................. CS
      ResIII  65 slleqtleefkkflseayke....igkkvsgdkkka...........kekdst 102
                 s+++  +++f++++s++ ++    i+kk +     +           k+++++
  KHJ32032.1 460 SITQNSKNAFQQMMSNQLTKsngtITKKRKA----QekiipppakvnKSNKNS 508
                 6778889999999999999864443333333....324447777654222222 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 0.85
                 EEEESSS-B--..........-SEEE CS
      ResIII  86 gkkvsgdkkka...kekdstnkkilv 108
                  ++v+++++++   k +++t+ +i++
  KHJ32032.1 669 DGSVNQEERRQqikKFNEDTSYRIFL 694
                 33333333333333223333333333 PP

>> Rrp44_CSD1  Rrp44-like cold shock domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.8      0.35   1.6e+03      58     108 ..     407     461 ..     397     508 .. 0.62
   2 ?   11.0   0.8   5.9e-05      0.27      80     132 ..     786     840 ..     775     858 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.35
                 S--TT-EEEEEE--GGG-B---S.S-B-.C..CCSSTT--TT-B--SSS--SSSS CS
  Rrp44_CSD1  58 rafngdqvivellpqsewkapss.ivld.s..ehfdvndnpdieagddddnness 108
                 r +  d vi +l  + + k+ ss ivl+ s  e +++++n  i+   +  ++ s 
  KHJ32032.1 407 RKYLVDTVIKQLTVNFQAKSLSSeIVLEdStdENLQIQENSRIKIKTNKREKSSI 461
                 6777889999998888888766547875234477888899888876654443332 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 5.9e-05
                 SS-B-CCCSSTT--TT-B--SSS--SSSSS..-SS--SHHHHHHHHHHHHHHHHH CS
  Rrp44_CSD1  80 sivldsehfdvndnpdieagddddnnesss..nttvisdkqrrllakdamiaqrs 132
                 +  +  + +  ndn      dddd+n s s   +++  d  + ll kd ++ q  
  KHJ32032.1 786 TSSVKKDGLTNNDNYTASNQDDDDDNTSKSvsGSSLSEDTLKNLLLKDGLVYQYK 840
                 445556667889999999888888887654115566778999********98853 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (916 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2112  (0.117798); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.79u 0.31s 00:00:01.10 Elapsed: 00:00:00.47
# Mc/sec: 5895.62
//
Query:       KHJ32033.1  [L=152]
Description: hypothetical protein EV44_g3928 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1122.78
//
Query:       KHJ32034.1  [L=535]
Description: hypothetical protein EV44_g4606 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-12   46.1   1.1    4.5e-12   46.1   1.1    2.0  2  MBOAT_2   Membrane bound O-acyl transferase family
  ------ inclusion threshold ------
        0.1   13.3   0.2       0.19   12.4   0.2    1.4  1  Ago_PAZ   Argonaute PAZ domain


Domain annotation for each model (and alignments):
>> MBOAT_2  Membrane bound O-acyl transferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.51   4.6e+03      21      39 ..      23      41 ..      17      56 .. 0.77
   2 !   46.1   1.1   5.1e-16   4.5e-12       1      82 [.     344     432 ..     344     433 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.51
     MBOAT_2 21 fWHqlfrrglkstakkilr 39
                ++Hq+f + +++ ++++l 
  KHJ32034.1 23 TYHQAFVQQVSNGTRRPLT 41
                6899999988888877765 PP

  == domain 2  score: 46.1 bits;  conditional E-value: 5.1e-16
     MBOAT_2   1 wpplfgsllea..yslrrfWgrfWHqlfrrglkstakkilrlllg...sklarylqllvaFllSGllHaagdytqlapest..allfFl 82 
                 +p + g++++    +l ++Wg fWHq++r+++++++k++l++      s +a+++ l++aF lS++lH a + t + +++   + lfFl
  KHJ32034.1 344 YPRIWGDVSDIldRGLGGLWGSFWHQTYRNFFTAPTKYLLKKCYIkprSFTAKIAGLFFAFGLSAFLHWAPSKTSSTSTRPfdQALFFL 432
                 577778885552279***************************888554449*******************9999999533377888887 PP

>> Ago_PAZ  Argonaute PAZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   2.1e-05      0.19       9      57 ..     131     177 ..     120     182 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.1e-05
     Ago_PAZ   9 lsikrvRntykedkkrtweleriseespeeivldklgvsLadYHrnkgn 57 
                 + +++v+n    + + + el    e++pe++ +++  +s a+YH++k +
  KHJ32034.1 131 VRVRVVKNME--NAQLSEELSLTDEKRPEKLAVENFSQSKAEYHEKKTE 177
                 2344444444..58889999999**********************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       647  (0.0360868); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.22s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 4048.74
//
Query:       KHJ32035.1  [L=131]
Description: hypothetical protein EV44_g2442 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       730  (0.0407162); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 1085.45
//
Query:       KHJ32036.1  [L=1663]
Description: putative c3hc4 type (ring finger) zinc finger containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-09   36.8   8.0    1.1e-08   35.3   8.0    1.9  1  zf-RING_2     Ring finger domain
    1.4e-06   28.4   5.8      5e-06   26.6   5.8    2.0  1  FANCL_C       FANCL C-terminal domain
    1.6e-05   25.1   5.3    1.6e-05   25.1   5.3    2.6  2  zf-rbx1       RING-H2 zinc finger domain
    3.3e-05   23.8   1.7    3.3e-05   23.8   1.7    2.3  2  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
     0.0012   18.4   4.7     0.0031   17.1   4.7    1.6  1  Zn_ribbon_17  Zinc-ribbon, C4HC2 type
     0.0053   16.6   9.0      0.018   14.9   9.0    2.0  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
       0.01   15.9   7.0       0.01   15.9   7.0    2.3  2  RINGv         RING-variant domain
      0.027   14.3   7.2      0.071   13.0   7.2    1.8  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
      0.043   14.1   7.1      0.093   13.0   7.1    1.6  1  zf-RING-like  RING-like domain
        0.1   12.5   5.0      0.053   13.4   2.6    1.7  1  C1_1          Phorbol esters/diacylglycerol binding domain (C
        2.3    8.1   8.2        8.5    6.3   6.0    2.9  2  zf-RING_9     Putative zinc-RING and/or ribbon
        2.3    8.1   5.0        5.9    6.8   5.0    1.8  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
        2.6    8.0   6.8        6.3    6.8   6.8    1.7  1  PHD           PHD-finger


Domain annotation for each model (and alignments):
>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   8.0   7.9e-12   1.1e-08       2      44 .]    1611    1658 ..    1610    1658 .. 0.87

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 7.9e-12
   zf-RING_2    2 eCpICleelssadsvl..ll.pCgHvfhreClerwlrssst..CPlCr 44  
                  eC+IC++ +s +++++  ++  C+ +fh +Cl +w++ss++  CPlCr
  KHJ32036.1 1611 ECAICYSIISADRKLPdkKCgTCNNIFHSKCLFQWFKSSNQsnCPLCR 1658
                  8*****99999999995433457789*********************9 PP

>> FANCL_C  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   5.8   3.7e-09     5e-06       2      47 ..    1609    1652 ..    1608    1662 .. 0.90

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 3.7e-09
                  --S-SSS--SS-TT-----B--S-TT----B-SGGGHHHHHHHHSS CS
     FANCL_C    2 eveCgiCyayrldsgevpdisCdnekCnkkfHsaCLkeWlrslkes 47  
                  + eC iCy+    + ++pd+ C    Cn++fHs+CL +W++s ++s
  KHJ32036.1 1609 QSECAICYSIISADRKLPDKKCG--TCNNIFHSKCLFQWFKSSNQS 1652
                  679*******************7..7***************99877 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.85   1.2e+03      40      49 ..    1195    1204 ..    1193    1206 .. 0.85
   2 !   25.1   5.3   1.2e-08   1.6e-05      18      55 .]    1624    1658 ..    1603    1658 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.85
     zf-rbx1   40 CiskWlktrk 49  
                  C+s+W+k+++
  KHJ32036.1 1195 CVSTWIKQKD 1204
                  *******975 PP

  == domain 2  score: 25.1 bits;  conditional E-value: 1.2e-08
     zf-rbx1   18 kapgdeecpvvlGeCgHaFHlhCiskWlkt..rkvCPlcr 55  
                  k        +++G+C+  FH +C+ +W+k+  +++CPlcr
  KHJ32036.1 1624 KL-----PDKKCGTCNNIFHSKCLFQWFKSsnQSNCPLCR 1658
                  22.....33568******************88889****8 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       3.9   5.4e+03       1      21 [.    1005    1025 ..    1005    1036 .. 0.77
   2 !   23.8   1.7   2.4e-08   3.3e-05      27      82 ..    1612    1662 ..    1592    1663 .] 0.83

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 3.9
                  --EEEEEEEE--B--B.-SSS CS
  zf-ANAPC11    1 mkvkikevksvatwswdvasd 21  
                  m +ki e +  +t +wd+ s+
  KHJ32036.1 1005 MNIKISEKDPTTTIMWDLISK 1025
                  8899*************9874 PP

  == domain 2  score: 23.8 bits;  conditional E-value: 2.4e-08
                  T-SBTTS--TTCSTTTTTS-EEEBTTS-EEEHHHHHHHHHHHSTSSB-TTTSSB-- CS
  zf-ANAPC11   27 crvsfdGtcpsckfpGddcplvlGkckhnfhlhcilkwletetskglcpmcrqtfk 82  
                  c + +     + k+p  +c    G+c+ +fh +c+++w+++ + +++cp+cr++f+
  KHJ32036.1 1612 CAICYSIISADRKLPDKKC----GTCNNIFHSKCLFQWFKS-SNQSNCPLCRNSFN 1662
                  4444777778888888888....99*************986.57899*****9986 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   4.7   2.3e-06    0.0031       5      46 ..    1610    1655 ..    1607    1657 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 2.3e-06
  Zn_ribbon_17    5 ksCayCelavk..grv..vlcgvCeHvlHasCarewfenddlaeCp 46  
                     +Ca+C   +   +++    cg C+ + H+ C+ +wf+  ++++Cp
    KHJ32036.1 1610 SECAICYSIISadRKLpdKKCGTCNNIFHSKCLFQWFKSSNQSNCP 1655
                    67999975554114332246*************************9 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   9.0   1.3e-05     0.018       1      41 []    1612    1657 ..    1612    1657 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.3e-05
                  -TTT-S--SS-E......E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4    1 CpiCleeakepn.....elleCkHsfCskCirkilksrkkvkCPlC 41  
                  C+iC + ++        +  +C+  f+skC+ ++ ks+++ +CPlC
  KHJ32036.1 1612 CAICYSIISADRklpdkKCGTCNNIFHSKCLFQWFKSSNQSNCPLC 1657
                  99**9999988888999999************************** PP

>> RINGv  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       2.5   3.5e+03      31      39 ..    1195    1203 ..    1193    1207 .. 0.80
   2 ?   15.9   7.0   7.4e-06      0.01       1      48 []    1612    1657 ..    1612    1657 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.5
                  HHHHHHHHT CS
       RINGv   31 ClekWldek 39  
                  C+++W+++k
  KHJ32036.1 1195 CVSTWIKQK 1203
                  ******983 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 7.4e-06
                  ETTTTEE-SSSS--B-SS--STCCCSB-HHHHHHHHHHTCT-SB-TTT CS
       RINGv    1 CriCleeeeeseplispCkCrGslklvHesClekWldekeantqCeiC 48  
                  C iC+   + +++l  + kC   ++++H +Cl +W+++ +++++C +C
  KHJ32036.1 1612 CAICYSIISADRKLPDK-KCGTCNNIFHSKCLFQWFKS-SNQSNCPLC 1657
                  88999998888877655.8999999*************.********* PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   7.2   5.2e-05     0.071       1      40 []    1611    1657 ..    1611    1657 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.2e-05
  zf-C3HC4_2    1 kCpiCldmlkdpsvvt.....pCgHvfCqkCilrsLeekn..eCPlC 40  
                  +C+iC+  ++    +       C+  f++kC+ ++ +++n  +CPlC
  KHJ32036.1 1611 ECAICYSIISADRKLPdkkcgTCNNIFHSKCLFQWFKSSNqsNCPLC 1657
                  6*****99997544435556799**************999889**** PP

>> zf-RING-like  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   7.1   6.8e-05     0.093      11      43 .]    1627    1657 ..    1612    1657 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.8e-05
  zf-RING-like   11 GvrCsnesCnvrlHvdCfqhyirthsskkCpkC 43  
                      +C+  +Cn ++H +C+ + ++++++ +Cp C
    KHJ32036.1 1627 DKKCG--TCNNIFHSKCLFQWFKSSNQSNCPLC 1657
                    35788..999**********************9 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   2.6   3.9e-05     0.053       9      43 ..    1607    1642 ..    1602    1652 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.9e-05
                  SS--B-TTT-SB--S.SSS-EEEETTT--EE-CCCC CS
        C1_1    9 kqptfCkhCgeflwg.kekqglkCswCkllvHkkCh 43  
                  k ++ C+ C ++++    ++  kC +C+ ++H kC+
  KHJ32036.1 1607 KGQSECAICYSIISAdRKLPDKKCGTCNNIFHSKCL 1642
                  66789********999*******************7 PP

>> zf-RING_9  Putative zinc-RING and/or ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.63   8.6e+02      84     145 ..    1189    1250 ..    1157    1252 .. 0.82
   2 ?    6.3   6.0    0.0062       8.5     157     203 ..    1611    1659 ..    1605    1661 .. 0.67

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.63
   zf-RING_9   84 keylktCrsaeaekllkllklrerehlledsdlyslkdLvevksgellekleklvelleeHv 145 
                  ++ +k+C s+  ++  + ++ ++   ++++ +lys    ++  +++l e l +l e++ +H 
  KHJ32036.1 1189 EKSIKICVSTWIKQKDRPFQGQKLAAMVTSLNLYSSLKKIKDPNDDLSEALVELNEQTMSHL 1250
                  5678899999778888889999999999******8644444457889999999999999996 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0062
   zf-RING_9  157 iCelCkseellfpfqlktverCekCkavfHkeClkkkekk....ecpkcer 203 
                   C +C   +++    +   ++C +C+++fH++Cl +  k+    +cp c++
  KHJ32036.1 1611 ECAICY--SIISADRKLPDKKCGTCNNIFHSKCLFQWFKSsnqsNCPLCRN 1659
                  577776..3455544444568************754333233469999975 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   5.0    0.0043       5.9       3      46 ..    1610    1660 ..    1608    1663 .] 0.72

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0043
                  SB-TTTSS......SBS-EEETTEEEEEE-HHHHHHHHH..TT-B-TTT--B CS
  zf-C3HC4_3    3 eeCviCle......rprnvvllpCgHlvlCeeCaekllk..rkkkCpiCrrp 46  
                  +eC iC++      +  +  +  C+ + + ++C+ ++ k  ++ +Cp+Cr +
  KHJ32036.1 1610 SECAICYSiisadrKLPDKKCGTCNNI-FHSKCLFQWFKssNQSNCPLCRNS 1660
                  789999996664443333444445555.6679*****9999*********86 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   6.8    0.0046       6.3       2      51 ..    1612    1659 ..    1611    1660 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0046
                  BTTTTS..TTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD    2 CavCkk..ksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCke 51  
                  Ca+C +  ++d +     C +C++ fH kCl    +s+++++    C+ C++
  KHJ32036.1 1612 CAICYSiiSADRKLPDKKCGTCNNIFHSKCLFQWFKSSNQSN----CPLCRN 1659
                  888888775555555668*************98888777776....999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1663 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       973  (0.0542696); expected 358.6 (0.02)
Passed bias filter:                      564  (0.0314574); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.97u 0.25s 00:00:01.22 Elapsed: 00:00:00.47
# Mc/sec: 10567.68
//
Query:       KHJ32037.1  [L=198]
Description: hypothetical protein EV44_g3787 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00026   20.7   0.0     0.0005   19.8   0.0    1.5  1  DDE_1     DDE superfamily endonuclease
  ------ inclusion threshold ------
        0.1   12.4   0.1       0.17   11.7   0.1    1.3  1  DivIC     Septum formation initiator


Domain annotation for each model (and alignments):
>> DDE_1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   5.6e-08    0.0005     103     175 .]       3      69 ..       1      69 [. 0.82

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 5.6e-08
       DDE_1 103 vflPassasllqPldqgvvselKarYrrqllqalleeqnrlskeqkkltlldalkfikkAwn.avsketiksaf 175
                 ++l a+s++l qPld+g++s lK+ Y r++   + +  ++          +++l    +A+   +++++ik++f
  KHJ32037.1   3 LYLFAHSSHLTQPLDVGCFSVLKRLYSREIDVFIKAHIKHTT-------KVEFLIAFHAAYLaTITEKNIKAGF 69 
                 56779*********************9998666655555555.......5889999999999899999999987 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   1.9e-05      0.17      24      71 ..     141     188 ..     137     191 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.9e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHCC-XXXXXXXXXXXXXXXXXXXXX CS
       DivIC  24 qeiaalqaelaklkaeneeLeaevkdLksdedyieerARselglvkpg 71 
                 q +a l +  + l  en  L ae++ L++  +++ +r R +  l+++g
  KHJ32037.1 141 QTVALLAKGTEMLAHENTLLSAEIRTLRKANEALSKRRRAKKTLIRQG 188
                 6678888999999************************99999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1409.30
//
Query:       KHJ32038.1  [L=580]
Description: putative f-box domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-07   29.2   1.0    1.9e-06   27.6   0.3    2.1  2  F-box-like  F-box-like
      0.001   18.8   0.3     0.0034   17.2   0.3    2.0  1  F-box       F-box domain


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.3   2.1e-10   1.9e-06       4      33 ..      61      90 ..      58      91 .. 0.94
   2 ?   -1.6   0.0      0.29   2.6e+03       2       9 ..     232     239 ..     231     240 .. 0.85

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 2.1e-10
  F-box-like  4 LPdEiLlqIFsyLppsdLlrlalVCrrWrr 33
                 P+Ei+l+I +yL ++dLlr++lVC  W++
  KHJ32038.1 61 MPNEICLKIIDYLYLEDLLRIRLVCHLWHQ 90
                7***************************95 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.29
  F-box-like   2 srLPdEiL 9  
                  rLP E+L
  KHJ32038.1 232 IRLPAEVL 239
                 79*****9 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.3   3.8e-07    0.0034       3      35 ..      58      90 ..      56     102 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 3.8e-07
                HHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHH CS
       F-box  3 lsrLPsevlrhILerLplsdllalrrVSkgwri 35
                + ++P+e+ ++I+ +L l dll++r+V+  w++
  KHJ32038.1 58 FKEMPNEICLKIIDYLYLEDLLRIRLVCHLWHQ 90
                6789***************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (580 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 4237.22
//
Query:       KHJ32039.1  [L=404]
Description: putative proteasome subunit alpha type 6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-23   80.5   0.4    2.3e-22   78.6   0.1    2.1  2  DUF2373   Uncharacterised conserved protein (DUF2373)
  ------ inclusion threshold ------
        2.9    7.4  27.4        1.4    8.4  13.6    2.1  2  DUF572    Family of unknown function (DUF572)


Domain annotation for each model (and alignments):
>> DUF2373  Uncharacterised conserved protein (DUF2373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.6   0.1   2.6e-26   2.3e-22       1      60 [.     177     236 ..     177     239 .. 0.97
   2 ?   -1.1   0.0       0.2   1.8e+03      28      47 ..     256     275 ..     253     284 .. 0.78

  Alignments for each domain:
  == domain 1  score: 78.6 bits;  conditional E-value: 2.6e-26
     DUF2373   1 eYLiqfykdrsnWKFsKqkQnwLlkhlfdaeeipseyfellleYlkglkGgarerlleea 60 
                 +YL+++++++++WKF+K++Q++Ll+h+fd++++ps y +l+++Y++gl+G++r+rl+++a
  KHJ32039.1 177 SYLREYHESKETWKFKKNNQTHLLQHIFDKDRVPSGYAHLIYAYVRGLRGQVRTRLRDAA 236
                 6********************************************************998 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.2
     DUF2373  28 fdaeeipseyfellleYlkg 47 
                 +d ++  +ey++++ +Yl++
  KHJ32039.1 256 LDPDMRQKEYEAAIADYLST 275
                 677777899********975 PP

>> DUF572  Family of unknown function (DUF572)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4  13.6   0.00016       1.4     193     332 .]      38     187 ..      23     187 .. 0.46
   2 ?    5.1   5.9    0.0016        15     250     330 ..     320     403 ..     231     404 .] 0.43

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00016
      DUF572 193 ekislekikll...pedeedekkaklle.gkte.slfasseesaksakk.kptkkesskekkkeslekklskltkkkad...............sslvv 270
                 e isl+++  l   ++++e++k+++ ++ ++++ ++f + + s+k++ + +p++ + ++  + ++l+++  +++k+ ++                 ++ 
  KHJ32039.1  38 EDISLKRKAVLldcSDEKENKKTKTVIDnTHQKlHEFTTPNASTKKSVTfTPET-KVEDGDSIKKLSNTWITQQKSLHQpnslfkphkaldikiDEIIL 135
                 455555222221223444555556666644443444555554444444445542.23333333333333333322222234556666666788755555 PP

      DUF572 271 rKkkkeeekskeskekteeeskeseeeskkeeetsaeeekeekakkkssslsllvaysdsdd 332
                 +Kk+ke +k+k +k k ++++++++e+s+         +++e ++k  s ls l +y +s++
  KHJ32039.1 136 KKKRKELKKAK-KKPKLKDNNASKQEKSQ---------NNSEPTNKIPSFLSYLREYHESKE 187
                 55555522222.22222222222222211.........222345667899999999999875 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0016
      DUF572 250 eslekklskltkkkad......sslvvrKkkkeeekskeskekteeeskeseeeskkeeetsaee.ekeekakkkssslsllvaysds 330
                  + ++++s++  k+++      +s vv Kk ++++k+++  e+++++++es++++++       + eke+ +k++s+s+s+ ++ sds
  KHJ32039.1 320 PEGNREVSSEPAKDTNcgkmelKSNVVHKKVRRRKKRTAIIEDSSSDDSESDSDDDSI----DSDiEKEKLSKSSSCSSSSSTSSSDS 403
                 2222222222222222222233445555555443333333332222222222222221....12222333333334444443444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (404 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2230  (0.124379); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 2927.91
//
Query:       KHJ32040.1  [L=455]
Description: putative c2 domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.4e-17   61.5   0.0    1.7e-16   60.4   0.0    1.6  1  C2        C2 domain
  ------ inclusion threshold ------
       0.16   11.6   0.0       0.29   10.7   0.0    1.3  1  DUF4085   Protein of unknown function (DUF4085)


Domain annotation for each model (and alignments):
>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.4   0.0   1.9e-20   1.7e-16       1     102 [.      31     133 ..      31     134 .. 0.89

  Alignments for each domain:
  == domain 1  score: 60.4 bits;  conditional E-value: 1.9e-20
                 TEEEEEEEEEESSSSSSTTSSCEEEEEEEEECEEEEEE-SC.SSSSSSEEEEEEEEEESC.HTTSEEEEEEEEECSSSTEEEEEEEEEEGHH..HHTTH CS
          C2   1 gklevtvieAknLpnkdkkgssdpyvkvsldgkqkakTrvi.knslnPvWnekftfevae.leeakLeveVfdndrlskddfiGkveiplst..llsge 95 
                 g+l v v +AknLp++++ g+ +py+ + l gk+ +kT++  +    P+W++++++ v++ +   +L+v+Vf++d+  k d+iG+++i+l++  +  g 
  KHJ32040.1  31 GTLVVVVDRAKNLPDRKIIGKQNPYCAARL-GKEAKKTDTDhRGGQTPKWDQELRYTVHDsPDYYQLKVSVFNDDK--KTDLIGETRIDLREiiVPGGG 126
                 6899**************************.9999999987455567**************************999..999***********8767777 PP

                 HHHEEEE CS
          C2  96 eaegwyp 102
                 + + w++
  KHJ32040.1 127 QNDFWHN 133
                 7777776 PP

>> DUF4085  Protein of unknown function (DUF4085)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   3.3e-05      0.29     136     174 ..     127     167 ..     123     175 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 3.3e-05
     DUF4085 136 sedlvleldcsggfseidkveiTfkdvakle..penletga 174
                 ++d+  +l+c+g +    +veiT+ d  + +  pe ++ ga
  KHJ32040.1 127 QNDFWHNLNCKGKYAGEIRVEITYYDTRQKQekPEAFKPGA 167
                 578999********************987665899999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (455 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3183.25
//
Query:       KHJ32041.1  [L=480]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.9e-14   52.2   0.0       0.55   11.2   0.0    7.2  7  WD40         WD domain, G-beta repeat
     0.0039   17.5   0.0         21    5.5   0.0    4.0  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.099   8.8e+02      25      34 ..      45      54 ..      34      55 .. 0.83
   2 !   10.8   0.0   8.4e-05      0.76       7      37 ..      74     114 ..      70     115 .. 0.81
   3 !   11.2   0.0   6.1e-05      0.55       4      36 ..     146     178 ..     143     180 .. 0.79
   4 ?    3.9   0.0     0.012   1.1e+02       9      38 .]     210     241 ..     205     241 .. 0.82
   5 ?    2.9   0.0     0.026   2.3e+02      14      36 ..     315     340 ..     303     342 .. 0.67
   6 !   11.1   0.0   6.4e-05      0.58      25      37 ..     399     411 ..     382     412 .. 0.79
   7 ?   -0.3   0.0      0.27   2.4e+03       4      16 ..     432     444 ..     429     460 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.099
                EEEEETTSEE CS
        WD40 25 lasGsdDgtv 34
                l++Gs+Dg +
  KHJ32041.1 45 LVTGSYDGII 54
                789*****98 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 8.4e-05
                 EESS.SSEEEEE.EETTSSE........EEEEETTSEEEEE CS
        WD40   7 ltGH.ssvtsla.fspdgaw........lasGsdDgtvriW 37 
                 +t+H s +++la +sp ++         lasGs D  ++i+
  KHJ32041.1  74 FTAHsSAIRCLAiTSPPSTItkqtqkiyLASGSTDERIHIY 114
                 79**666*****9666666678888888*****9*999997 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 6.1e-05
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvri 36 
                 l++l  H + +t+++f+  g++l+s  +D+ + i
  KHJ32041.1 146 LGSLLHHsGAITAMCFPNRGKLLTS-AEDRQISI 178
                 6677778445************965.56**9987 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.012
                 SS.SSEEEEEEETTSSEEEEE..ETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasG..sdDgtvriWd 38 
                 G  ++++++a +p+ + ++s   +  +  r+W+
  KHJ32041.1 210 GApNGINDFAIHPSLKIMISVgkG-ERCMRLWN 241
                 56678************8865255.*******8 PP

  == domain 5  score: 2.9 bits;  conditional E-value: 0.026
                 EEEE.EETTSSE..EEEEETTSEEEE CS
        WD40  14 tsla.fspdgaw..lasGsdDgtvri 36 
                 + l+ f+ ++++  +a++++Dg++ +
  KHJ32041.1 315 HQLDyFHASKNYdiIAASTEDGKIIF 340
                 44556444444454888899**9976 PP

  == domain 6  score: 11.1 bits;  conditional E-value: 6.4e-05
                 EE.EEETTSEEEEE CS
        WD40  25 la.sGsdDgtvriW 37 
                 +a +Gs Dgt+r+W
  KHJ32041.1 399 IAtAGS-DGTIRLW 411
                 452567.******* PP

  == domain 7  score: -0.3 bits;  conditional E-value: 0.27
                 EEEEESSSSEEEE CS
        WD40   4 lrtltGHssvtsl 16 
                 ++t+++ + +t+l
  KHJ32041.1 432 VGTYETNNRITCL 444
                 678888888**** PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.7   0.0    0.0041        36      37      77 ..     152     191 ..     101     200 .. 0.82
   2 ?    1.7   0.0     0.036   3.2e+02       5      22 ..     324     341 ..     308     371 .. 0.83
   3 !    5.5   0.0    0.0024        21      52      86 ..     398     443 ..     394     446 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0041
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsls 77 
                  +++ ++++++ + gklL  a +d +++++   + +v+ s++
   KHJ32041.1 152 HSGAITAMCFPNRGKLLTSA-EDRQISIIRTRDWNVLCSIK 191
                  67899**********99865.78999999988888877776 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.036
  ANAPC4_WD40   5 ptmDLiAlatedgellvf 22 
                   + D+iA  tedg+++ f
   KHJ32041.1 324 KNYDIIAASTEDGKIIFF 341
                  566888888888877654 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.0024
  ANAPC4_WD40  52 lLavaysdgevrlldaesgkvvhslsvksek...........avtc 86 
                  ++a a sdg++rl ++++ + +++ + +++            ++tc
   KHJ32041.1 398 IIATAGSDGTIRLWQVQHHDFMSHTESTKQIglvvgtyetnnRITC 443
                  689999****************999888765555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (480 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3400.30
//
Query:       KHJ32042.1  [L=360]
Description: hypothetical protein EV44_g2619 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.8e-05   23.4   0.1    9.6e-05   22.2   0.1    1.7  1  AAA_lid_2  AAA lid domain
     0.0022   17.9   0.1     0.0082   16.0   0.0    1.9  2  AAA_3      ATPase family associated with various cellular act


Domain annotation for each model (and alignments):
>> AAA_lid_2  AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.1   1.1e-08   9.6e-05       4      62 ..     264     322 ..     262     335 .. 0.87

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 1.1e-08
   AAA_lid_2   4 rahlaielgvsgrRadlallraArAlAalegrdyVtpeDvkeaaplVLaHRlr.repeae 62 
                 r h+a++ g+    a+ ++ + A+ lA +++ ++Vtp  v  aa+ V+ HR++  +pe e
  KHJ32042.1 264 RLHRAVAGGITAS-ATKVFDKLAKCLATIHNLTFVTPSLVALAARKVYFHRIKkVKPENE 322
                 6789999999999.9999***********************************5455444 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.28   2.5e+03      60      75 ..      70      85 ..      33      92 .. 0.72
   2 !   16.0   0.0   9.2e-07    0.0082      52     108 ..     113     168 ..      97     177 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.28
       AAA_3 60 pvfanllladeinrap 75
                  fa+l++  ein ++
  KHJ32042.1 70 DEFAQLIILSEINVSN 85
                3488888888888665 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 9.2e-07
       AAA_3  52 kefefkkGpvfanllladeinrappktqsalleameerqvtvegethklpepflvla 108
                 ++f  ++  +f n+++a ++n a+ ++q  +le ++ +++  +++ +++pe+fl++ 
  KHJ32042.1 113 TKFPSTPTSIF-NVIIAKNLNNASKQVQNQVLELVRTKRLLSKSSIYHVPEQFLLIV 168
                 44555555565.899**************************************9774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       791  (0.0441185); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.21s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 2831.11
//
Query:       KHJ32043.1  [L=545]
Description: putative gda1 cd39 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   2.1e-100  336.3   0.0   2.7e-100  336.0   0.0    1.1  1  GDA1_CD39  GDA1/CD39 (nucleoside phosphatase) family


Domain annotation for each model (and alignments):
>> GDA1_CD39  GDA1/CD39 (nucleoside phosphatase) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  336.0   0.0  1.5e-104  2.7e-100       9     413 ..     111     534 ..     104     545 .] 0.89

  Alignments for each domain:
  == domain 1  score: 336.0 bits;  conditional E-value: 1.5e-104
   GDA1_CD39   9 kygiviDAGSsgsrlhvykwkdekesllqivklieevkkleP...GlSsfekkpeeaaeylkpllelaeeviPeekrsetpvlikATAGlRLlkeekke 104
                 +++++iDAGS+gsr+hvyk+ ++   + + +++  +++ ++P   GlSs+++++eeaa +l+ ll++a + +P+e +s+tp+++kATAGlRLl  +++ 
  KHJ32043.1 111 QFVLMIDAGSTGSRIHVYKF-NNCGPIPDLEHEEFKMTDKKPggsGLSSYKTNAEEAARSLDVLLDVALKSVPNELKSCTPIAVKATAGLRLLGPKISR 208
                 79******************.4444444455555557777774446***************************************************** PP

   GDA1_CD39 105 kilkalrnklkklsefkved...qgiriidGeeEGiYgWiaiNYllGkfnkeapevskqetvgvlDlGGaStQiafepqeeseiaekvedieelklqek 200
                  il+a+r+ l+++++f+v     +g+ i+dG+ EG+Y+Wi++NYllGk++ +    +k++t++vlDlGG+StQi++ep+    ++e+  d+ ++k +++
  KHJ32043.1 209 DILSAVRARLESKYPFPVVSneeNGVAIMDGKDEGVYAWITTNYLLGKIGGK----DKSSTAAVLDLGGGSTQIVYEPKFRLSENERFADG-DHKYNLS 302
                 *****************97666689*************************99....69*********************9999999*****.6****** PP

   GDA1_CD39 201 ledkkyklyvtsfLgyGanealrkklaklikkasee..........vlkdpClprglektvevkdle........fkqfaikgtgnyeqCrksikelln 281
                 + +++++ly++s+LgyG+  a++    +li+   e            + +pC+ +g+++++evk             +++ +  +  +qCr++ +++l 
  KHJ32043.1 303 FGSQNFELYQHSHLGYGLMSARESIHRTLIQDIYEAnstdhkwisqPIVNPCIAPGMNRQIEVKLSPshklgesvSVNMVGPTYPAPAQCRRLAEKILY 401
                 *****************99999888888888776666779***9998999************9877788999988788899999999************ PP

   GDA1_CD39 282 knakCkaeeClfngvfapsidl..lqklfgaseyfYtvsdvlklggekvklekltealrkfCk.knweeikaeskkskeksiseeeaCfkgayvlslLh 377
                 k+akC + +C+fngv++ps      q+++ +++yf++  + l++ ++  +l++l + + ++C  ++   i+a++++ + +     e C++++++++lLh
  KHJ32043.1 402 KDAKCATTPCSFNGVYQPSLSAsfSQGDIYTFSYFFDRINPLGMPESF-TLNELLDLTNQVCGgESHWGIFASVPGALVELRGRPEHCLDLSFIMALLH 499
                 ******************976545778888888888887777777666.*************9766668************9999************** PP

   GDA1_CD39 378 dGfdldktveelqsvekiaekelgWtLGamlnllka 413
                  G++++ + +e+++ +ki+++elgW+LGa+l ll++
  KHJ32043.1 500 IGYQIPLN-REIKIAKKIKNNELGWCLGASLPLLNT 534
                 ********.**********************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (545 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3712.15
//
Query:       KHJ32044.1  [L=336]
Description: putative cell cycle control protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0001   22.2   3.1    0.00029   20.7   3.1    1.8  1  zf-RING_5     zinc-RING finger domain
    0.00027   20.9   2.5    0.00068   19.6   2.5    1.7  1  zf-RING_UBOX  RING-type zinc-finger
     0.0029   17.4   1.8      0.022   14.6   0.2    2.3  2  Prok-RING_4   Prokaryotic RING finger family 4
     0.0051   16.6   0.4     0.0051   16.6   0.4    1.9  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.019   15.3   2.0      0.068   13.5   0.3    2.3  2  zf-RING_2     Ring finger domain
       0.02   14.7   1.0       0.11   12.3   0.2    2.2  2  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
      0.047   13.6   3.7       0.13   12.1   3.7    1.7  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
      0.054   13.7   1.3       0.13   12.4   0.2    2.0  2  zf-C3HC4_4    zinc finger of C3HC4-type, RING


Domain annotation for each model (and alignments):
>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   3.1   1.3e-07   0.00029       2      34 ..     237     293 ..     236     323 .. 0.67

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.3e-07
   zf-RING_5   2 CnkCfekl....................skeekfyl.tsCgHifCekClkkll...e 34 
                 C++C e+l                    ++e++f++  +CgH++C++C++++     
  KHJ32044.1 237 CPSCDEELthskedplaknqgkisnkkdREEHPFWVvKECGHVYCNSCFQNRGdktR 293
                 778888887777777777777766655556666775168***********9985550 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   2.5     3e-07   0.00068       1      29 [.     237     288 ..     237     300 .. 0.80

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 3e-07
  zf-RING_UBOX   1 CpIClelft......................dP..lvlpCGHtFCreClwels 29 
                   Cp C e++t                      +P  +v +CGH++C +C + ++
    KHJ32044.1 237 CPSCDEELThskedplaknqgkisnkkdreeHPfwVVKECGHVYCNSCFQ-NR 288
                   999999999999999999999999999999899864448*********94.22 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1      0.11   2.5e+02      32      42 ..     236     246 ..     228     252 .. 0.72
   2 !   14.6   0.2   9.7e-06     0.022      12      28 ..     272     288 ..     264     295 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.11
  Prok-RING_4  32 sCPlCqrrisk 42 
                   CP C +++ +
   KHJ32044.1 236 VCPSCDEELTH 246
                  68888888765 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 9.7e-06
  Prok-RING_4  12 ilepCgHlvCkeCfdsk 28 
                  +++ CgH+ C++Cf++ 
   KHJ32044.1 272 VVKECGHVYCNSCFQNR 288
                  6789**********975 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1         2   4.5e+03      37      40 .]     237     240 ..     234     247 .. 0.76
   2 !   16.6   0.4   2.3e-06    0.0051      14      29 ..     272     287 ..     264     293 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2
  zf-C3HC4_2  37 CPlC 40 
                 CP C
  KHJ32044.1 237 CPSC 240
                 6666 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 2.3e-06
  zf-C3HC4_2  14 vvtpCgHvfCqkCilr 29 
                 vv++CgHv+C++C++ 
  KHJ32044.1 272 VVKECGHVYCNSCFQN 287
                 689***********86 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.41   9.1e+02      40      43 ..     237     240 ..     224     251 .. 0.70
   2 ?   13.5   0.3     3e-05     0.068      16      32 ..     271     287 ..     260     294 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.41
   zf-RING_2  40 CPlC 43 
                 CP C
  KHJ32044.1 237 CPSC 240
                 7777 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 3e-05
   zf-RING_2  16 vlllpCgHvfhreCler 32 
                 +++++CgHv++ +C+++
  KHJ32044.1 271 WVVKECGHVYCNSCFQN 287
                 33446*********975 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1      0.29   6.5e+02      40      47 ..     237     244 ..     230     249 .. 0.63
   2 ?   12.3   0.2   5.1e-05      0.11      15      33 ..     271     288 ..     263     294 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.29
                 -TTT--B- CS
  zf-C3HC4_3  40 CpiCrrpi 47 
                 Cp C ++ 
  KHJ32044.1 237 CPSCDEEL 244
                 55555544 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 5.1e-05
                 EEETTEEEEEE-HHHHHHH CS
  zf-C3HC4_3  15 vvllpCgHlvlCeeCaekl 33 
                 +v+ +CgH+ +C++C+++ 
  KHJ32044.1 271 WVVKECGHV-YCNSCFQNR 288
                 67889****.*****9976 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   3.7   5.9e-05      0.13       1      29 [.     237     288 ..     237     295 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 5.9e-05
                 -TTT-S--SS-E........................E-TTS--B-CHHHHHH CS
    zf-C3HC4   1 CpiCleeakepn.......................elleCkHsfCskCirki 29 
                 Cp C ee++  +                        + eC+H +C++C ++ 
  KHJ32044.1 237 CPSCDEELTHSKedplaknqgkisnkkdreehpfwVVKECGHVYCNSCFQNR 288
                 66677776666666677777777777777777778889**********9886 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.76   1.7e+03      37      42 .]     235     240 ..     225     249 .. 0.74
   2 ?   12.4   0.2     6e-05      0.13      15      27 ..     275     287 ..     267     297 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.76
  zf-C3HC4_4  37 llCplC 42 
                 l Cp C
  KHJ32044.1 235 LVCPSC 240
                 566666 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 6e-05
  zf-C3HC4_4  15 eCGhsfClsCiss 27 
                 eCGh++C sC ++
  KHJ32044.1 275 ECGHVYCNSCFQN 287
                 8*********865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       682  (0.0380389); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2500.76
//
Query:       KHJ32045.1  [L=647]
Description: putative mitochondrial-processing peptidase subunit alpha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-50  170.9   0.0      1e-49  169.1   0.0    1.9  1  Peptidase_M16_C  Peptidase M16 inactive domain
    2.6e-43  147.5   0.0    2.7e-42  144.2   0.0    2.1  2  Peptidase_M16    Insulinase (Peptidase family M16)


Domain annotation for each model (and alignments):
>> Peptidase_M16_C  Peptidase M16 inactive domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.1   0.0   1.1e-53     1e-49       2     183 .]     271     546 ..     271     546 .. 0.99

  Alignments for each domain:
  == domain 1  score: 169.1 bits;  conditional E-value: 1.1e-53
                      H-HHHHHHHHHHHSSGGGEEEEEEESS-HHHHHHHHHHHHTTSTHHSH.............................................. CS
  Peptidase_M16_C   2 ltredlkefykkfYrpenmvlaivGdvdheelvkliekyfgdlkaska.............................................. 49 
                      +++ ++ +++k f++pe++vla++G v+h e++kl+e+yfgd++ ++                                               
       KHJ32045.1 271 INKGVIEAYRKFFFQPERIVLAFAG-VEHYEALKLVENYFGDIPITHInqssiglqtfdsplthnqinlphpsssqvqfnasssqissstpsil 363
                      678899*******************.******************9999********************************************** PP

                      ......................................CSGSCTSSSSSGGGSSEEEEEEEESSSSSEEEEEEEEEECTCTHTTHHHHHHHHHH CS
  Peptidase_M16_C  50 ......................................ppakptgepltpatlkkppvvlkkldeeqahlslafegpskendeddlalavlntl 105
                                                            +p+++tg++l+   ++ pp+ ++  +   +h+ lafe +++ + ed++ala+++tl
       KHJ32045.1 364 aqtstkiapratfynylstwaadspvqipdfpspldslQPSHYTGGFLS--LPNLPPPTNPSFP-ALTHIHLAFESLPI-SSEDIYALATIQTL 453
                      *************************************************..*************.**************.************** PP

                      HHSS...........TTSHHHHHHHTTTTSESEEEEEEEEESSCEEEEEEEEEECTTHHHHHHHHHHHHHHHHHH.T...S-HHHHHHHHHHH CS
  Peptidase_M16_C 106 Lggg...........mesrLytnlrekeglaysvsafndsyrdsglfgisatadpenveevvevilkelrklkke.g...lteeeleraknql 183
                      Lggg           m+srLytn+++++g+++s++afn+sy+dsglfgisa++ p  v ++++v+++el++l+ e g   l+  e++raknql
       KHJ32045.1 454 LGGGgsfsaggpgkgMYSRLYTNVLNQHGWVESCVAFNHSYTDSGLFGISASCVPAYVPQMLDVMCRELHALTLEnGpycLQNVEVKRAKNQL 546
                      ***************************************************************************77***************8 PP

>> Peptidase_M16  Insulinase (Peptidase family M16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.2   0.0   3.1e-46   2.7e-42       1     149 []     118     265 ..     118     265 .. 0.98
   2 ?    0.9   0.0     0.046   4.1e+02      76     144 ..     503     567 ..     471     570 .. 0.74

  Alignments for each domain:
  == domain 1  score: 144.2 bits;  conditional E-value: 3.1e-46
                    EEEEEE-TSSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSCHHHHHHHHHHTTCEEEEEEESSEEEEEEEEEGGGHHHHHHHHHHHHH CS
  Peptidase_M16   1 rvalesdppaktsavglvvdaGSryepkdlnGlAHllehmafkgTkkypsnklaeeleklGgslnAttsrentvYyvevlskdlekaldvladvfk 96 
                    rva+e   p ++s +g+++daGSr e+++l+G++H+++++afk+T++++s+++ +++e+lGg++n+ +sre  +Y+  ++++++++a++++a++++
     KHJ32045.1 118 RVATEAL-PGHFSGIGVFIDAGSRFENENLRGVSHIIDRLAFKSTQNRSSDEMLQVMESLGGNINCASSRESLMYQCATFNSAVPNAVAIMAETIR 212
                    6888888.99************************************************************************************** PP

                    SBTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTTTSGGGSHSS-TH CS
  Peptidase_M16  97 aplleesevererkvvekeveavdaepekvveenlhaaayrekalgrsllgpe 149
                    +pl++ese++++ +++ +e+ +++++p+ +++e +h+aay+ ++lg++ll+p+
     KHJ32045.1 213 DPLIKESEIQEQLETAAYEIGEIWSKPDLILPELVHTAAYKGNTLGNPLLCPK 265
                    ***************************************************96 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.046
                    EEEEEGGGHHHHHHHHHHHHHSBTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTTTSGGGSH CS
  Peptidase_M16  76 yvevlskdlekaldvladvfkaplleesevererkvvekeveavdaepekvveenlhaaayrekalgrs 144
                     +++ + +++++ldv++  + a +le+     +    + ev+ ++++ + ++++nl++ + + + lgr+
     KHJ32045.1 503 SASCVPAYVPQMLDVMCRELHALTLENGPYCLQ----NVEVKRAKNQLRSSLLMNLESRMVELEDLGRQ 567
                    5677888999******99999999997655552....24666666666667788888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (647 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.22s 00:00:00.83 Elapsed: 00:00:00.39
# Mc/sec: 4981.30
//
Query:       KHJ32046.1  [L=824]
Description: putative vacuolar protein sorting-associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.2e-92  308.5   0.0    8.1e-92  308.1   0.0    1.1  1  Vps16_N      Vps16, N-terminal region
    1.6e-82  277.1   0.1    2.7e-82  276.4   0.1    1.3  1  Vps16_C      Vps16, C-terminal region
    0.00052   20.3   0.0      0.075   13.3   0.0    2.6  2  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
       0.12   13.2   0.2        2.8    8.9   0.1    2.8  2  WD40         WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> Vps16_N  Vps16, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  308.1   0.0   1.8e-95   8.1e-92       1     410 []       4     408 ..       4     408 .. 0.92

  Alignments for each domain:
  == domain 1  score: 308.1 bits;  conditional E-value: 1.8e-95
     Vps16_N   1 psaewellkdsyyrkeelgtadwelkeevedllvavapygGpiAvtrspsklepa.adarPv.yiqiyslsGrlLkkllwnkeklvklgwseeeeLivv 97 
                 p+++we++ d+yyrk +l+t  ++ + e+e+ +++ +pygG+iA+ r++skl++  + +     ++iys+ G+l+++++w+k+ +  lgwse+e+Li+v
  KHJ32046.1   4 PTVDWEKVGDKYYRKIQLYTSIFDQDLELEYYILTGCPYGGAIALYRDESKLQNFrGAQLSTsNVDIYSCAGKLIRRINWDKGTIKGLGWSEDEKLIIV 102
                 789**************************************************99855555559*********************************** PP

     Vps16_N  98 qkagavlvygll.Gek.sfsigeevesvkvrecrifatsagesGvavltksgrvilvnnveeelklrkkpeipnlltefqnaesltei...ilLlvdev 191
                 + +g+v+ y+ + G++ +f++g++ ++  v  c     +++ +G ++l  ++++i+++  +e+ +  k   +p l      ++s+t i   ++L+  + 
  KHJ32046.1 103 TSDGTVRCYDNFqGDFtQFTLGNGSDEYGVASC-----RFYGTGFVALLCNNNLISITQYKEP-R-PKILAVPPLGE----VHSWTLIppnYPLS--RS 188
                 *********8765999*****************.....678899999**************99.3.45556666655....67777776435554..55 PP

     Vps16_N 192 vqillavGeslkliteqsa.kavssnekvvkisvsdnrrhlalytetgkillisvdlskklleleldakdipkqiaWvgndaVvvsfesllvlvgkagd 289
                 v++ll   ++l +++  +    +  +  +v+isvs+n +++alyt +g+i +i++d++  l e++ +   +p +++W+gnda+v+++e+++ +vg++  
  KHJ32046.1 189 VEVLLNIRQTLITVDTTECeDHMLDLGPFVHISVSPNGKFVALYTTKGNIHVITSDFQSRLSEHNSKYTIPPIDMQWCGNDAIVMAWEDEVHIVGPNNV 287
                 6666666677777888887444556699*********************************************************************** PP

     Vps16_N 290 svqflydetanlsaEvDGvriltkssveflrrvpaasenifaigskePgalLveaqkkleeksskadeiLkeikdklekavddCieaaldefqpelQKl 388
                   ++ yd      aE+DGvr++t++  +f+++vp+ ++++f+   + P++ L++a ++le+ks+k d+ ++ i+ +l +avd+C++aa  ef+  lQK 
  KHJ32046.1 288 MAKYDYDSRVHFIAELDGVRLITNDVCDFIQKVPEVTDEVFRFDTESPASILLDAVEQLEKKSPKVDNNIQIIRPNLVQAVDTCVKAAGFEFNTSLQKK 386
                 *************************************************************************************************** PP

     Vps16_N 389 LLraAsfGkaflrnknpdeyvr 410
                 LL+aAsfGk+ l+ +n d++v+
  KHJ32046.1 387 LLKAASFGKSVLDIYNSDDFVD 408
                 ******************9985 PP

>> Vps16_C  Vps16, C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  276.4   0.1   6.1e-86   2.7e-82       1     299 [.     501     802 ..     501     814 .. 0.97

  Alignments for each domain:
  == domain 1  score: 276.4 bits;  conditional E-value: 6.1e-86
     Vps16_C   1 isyvkiAkkAyqeGRleLsikLlelEkraeeqvelLlklekselAlkkaiesgdteLiisvllelkkklalsdlfkllredplalklYkkfmkksdrat 99 
                 is+v++ + Ay eGR  L+++Ll+ E+ra++qv lLl +e++e Al kaiesgd +Li++vll+lkkkl l+++ +++++ p+a ++    + + d + 
  KHJ32046.1 501 ISFVEVSRAAYDEGRGRLATELLNHEPRAGKQVSLLLSMEEDETALDKAIESGDSDLILYVLLHLKKKLPLASFCRVINNRPVATSIVESSALDDDLEL 599
                 89************************************************************************************************* PP

     Vps16_C 100 LydlynqdDnkqelaelllqdalkevegles..aLksiadvysqaknseleakliedqlkLlklqktledkfavsfvglsldetvskLiligqdkraek 196
                 L+dly+qdD+  + a++ +++alk+ +++++  +L  +a + +++k++++e k++ + + Llklq  +e  fa sf gls++et+ kLi+ g++ +a k
  KHJ32046.1 600 LKDLYYQDDRPVDGANVFVREALKQPNNRTArdKLAIAARMLTDSKDTSFELKALHEAITLLKLQDLYERDFAESFAGLSVNETMFKLIQLGHTSQATK 698
                 ***********************99999987446999************************************************************** PP

     Vps16_C 197 lrkdFkipekrlywLklkaLvelkkweelekfakSkkSPiGyePFvevllkqgnkkeAkkYiprit.glstqekvklyvevgdvkeAielAakekdvse 294
                 ++ +Fk++ek  +w++l+aLv+ ++w++le fak +kSPiG+ PF++ +l +gn + A+ +ip+++  +++ e +++y ++g   +A+e+A k kd ++
  KHJ32046.1 699 VQTEFKVSEKTSWWIRLRALVSKRDWNKLEDFAKTRKSPIGWVPFFNLILGAGNPRLASLFIPKLAiTVQPSEIIVMYEKCGMRFKAAEEALKIKDLES 797
                 ***************************************************************976378999*************************** PP

     Vps16_C 295 Lkell 299
                 L+ l 
  KHJ32046.1 798 LQRLK 802
                 *9875 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   1.7e-05     0.075      35      72 ..      82     118 ..      40     130 .. 0.78
   2 ?    4.0   0.0     0.014        63      44      89 ..     220     265 ..     213     277 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.7e-05
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkv 72 
                  + +++++++L W++d+kl+  ++sdg+vr +d  +g+ 
   KHJ32046.1  82 NWDKGTIKGLGWSEDEKLII-VTSDGTVRCYDNFQGDF 118
                  557899**********9875.589*******9888765 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.014
  ANAPC4_WD40  44 LaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  ++ +p+gk+ a  + +g+++++ +  +  +++ + k +     ++W
   KHJ32046.1 220 ISVSPNGKFVALYTTKGNIHVITSDFQSRLSEHNSKYTIPPIDMQW 265
                  6678999999999999999999988777777777766665666666 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.1   0.00063       2.8      13      38 .]      88     112 ..      53     112 .. 0.73
   2 ?    0.7   0.0      0.25   1.1e+03      13      26 ..     218     230 ..     204     242 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00063
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 + +l +s d ++++  s Dgtvr +d
  KHJ32046.1  88 IKGLGWSEDEKLIIVTS-DGTVRCYD 112
                 55555*******99999.*****998 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.25
                 EEEEEEETTSSEEE CS
        WD40  13 vtslafspdgawla 26 
                 v ++++sp+g+++a
  KHJ32046.1 218 V-HISVSPNGKFVA 230
                 4.7889******85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (824 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.39
# Mc/sec: 6289.76
//
Query:       KHJ32047.1  [L=654]
Description: putative ring finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-14   53.0   0.0    8.6e-14   51.6   0.0    1.8  1  FHA           FHA domain
      9e-12   44.5   9.0    2.1e-11   43.3   9.0    1.7  1  zf-RING_11    RING-like zinc finger
     0.0002   21.6  15.3    0.00043   20.6  15.3    1.6  1  zf-RING_2     Ring finger domain
  ------ inclusion threshold ------
      0.016   15.5   0.0      0.045   14.1   0.0    1.7  1  Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic d
      0.058   13.5   0.9       0.15   12.2   0.9    1.7  1  Swi5          Swi5
       0.11   12.4  13.7       0.22   11.4  13.7    1.6  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
       0.12   12.3  10.8       0.23   11.5  10.0    2.0  2  zf-RING_5     zinc-RING finger domain
       0.87    9.7   6.3        1.7    8.8   6.3    1.4  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
        1.3    9.1  14.5        3.4    7.8  14.5    1.7  1  zf-RING_UBOX  RING-type zinc-finger


Domain annotation for each model (and alignments):
>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   0.0   4.3e-17   8.6e-14       2      69 .]     259     342 ..     258     342 .. 0.90

  Alignments for each domain:
  == domain 1  score: 51.6 bits;  conditional E-value: 4.3e-17
                 EEESSTTSSEE.TT.............STTSTTTEEEEEEETTCEEEEEEEESSSSSEEETTEEEST....TSEEEE-TTEEEEET CS
         FHA   2 tiGRssdcdiv.ld.............dpsiSrkHalikfdkgsgkvyleDlgSknGtfvNgqrigk....gepveLksgdvielG 69 
                 ++GR s+ di+ ++             ++++Sr+H+++++  g  +++++D++S+ Gtf+N+ r++     ++p ++++gd+++lG
  KHJ32047.1 259 KVGRYSEKDIQpVHtpnapssapigfkSKVVSRRHCEFWCYAG--NWFIKDVKSSSGTFLNHIRLSApgteSKPFPVHDGDIVQLG 342
                 799999999995336677788888887899*************..********************99999**************98 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   9.0   1.1e-14   2.1e-11       1      29 []     398     426 ..     398     426 .. 0.99

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 1.1e-14
  zf-RING_11   1 eCsICLeefkpgqalfilpCsHtFHfkCI 29 
                 +CsICL +++p+q lf++pCsHt+H+kCI
  KHJ32047.1 398 DCSICLCPIAPCQPLFVAPCSHTWHYKCI 426
                 9***************************9 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6  15.3   2.2e-07   0.00043       2      44 .]     398     444 ..     397     444 .. 0.86

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 2.2e-07
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssst.....CPlCr 44 
                 +C+ICl+++ + + + + pC+H+ h++C++ ++ + ++     CP+Cr
  KHJ32047.1 398 DCSICLCPIAPCQPLFVAPCSHTWHYKCIRVII-NGPHwphfiCPNCR 444
                 7********999999999***********8864.444457999****9 PP

>> Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.2e-05     0.045      34      82 ..     287     342 ..     276     344 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.2e-05
                   TTS-TT-EEEEEETTEEEEEE-CESS--EETTEE-S....ECC...--TTSEEEET CS
  Yop-YscD_cpl  34 kevsrkhlkLeveeesvrledlgsrngllvngerve....ele...lrpgdvlelG 82 
                   k vsr+h++  + + ++ ++d++s  g+++n+ r +    e++   +++gd ++lG
    KHJ32047.1 287 KVVSRRHCEFWCYAGNWFIKDVKSSSGTFLNHIRLSapgtESKpfpVHDGDIVQLG 342
                   78******************************999844323337777777777777 PP

>> Swi5  Swi5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.9   7.4e-05      0.15       4      53 ..     445     503 ..     443     505 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 7.4e-05
                 HHHHHHHHHHHH.HHHHHHHHHHHHHHH.........HHHHHHHHHHHHHHHHHHHHHH CS
        Swi5   4 eikeleeqleel.ekelaelkeelkekk........dpeetvkrhIklLheYNEiKDvg 53 
                 +i++le++lee+  +el+e+k+e k+k+          ++   + +++Lh YN+i   +
  KHJ32047.1 445 SIADLEAELEETcSEELEEVKSERKSKEnrnitdpsINATHSAEDLSRLHSYNDINNFT 503
                 788999888876367899999999998899999885455666789*********97665 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4  13.7   0.00011      0.22       1      41 []     399     443 ..     399     443 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00011
                 -TTT-S--SS-E...E-TTS--B-CHHHHHHHHC..TSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn..elleCkHsfCskCirkilks..rkkvkCPlC 41 
                 C+iCl+ ++  +   + +C H+ ++kCir i++     ++ CP+C
  KHJ32047.1 399 CSICLCPIAPCQplFVAPCSHTWHYKCIRVIINGphWPHFICPNC 443
                 ******87544444*******************87444555***9 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5  10.0   0.00011      0.23       2      43 ..     399     444 ..     398     445 .. 0.95
   2 ?    1.7   0.5      0.13   2.6e+02      22      34 ..     437     452 ..     436     459 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00011
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll....ekeavCpiCr 43 
                 C++C +++ + ++ ++ +C+H+ + kC++        + + Cp Cr
  KHJ32047.1 399 CSICLCPIAPCQPLFVAPCSHTWHYKCIRVIIngphWPHFICPNCR 444
                 ******************************999999999******8 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.13
   zf-RING_5  22 HifCekClkkll...e 34 
                 H++C +C + +    e
  KHJ32047.1 437 HFICPNCRSIADleaE 452
                 9999999876665554 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   6.3   0.00085       1.7      35      81 ..     399     447 ..     389     451 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00085
                 -TTCSTTTTTS.-EEEBTTS-EEEHHHHHHHHHHHST.SSB-TTTSSB- CS
  zf-ANAPC11  35 cpsckfpGddc.plvlGkckhnfhlhcilkwletets.kglcpmcrqtf 81 
                 c  c  p   c pl +  c+h++h +ci   ++ ++  +  cp cr + 
  KHJ32047.1 399 CSICLCPIAPCqPLFVAPCSHTWHYKCIRVIINGPHWpHFICPNCRSIA 447
                 889999999996788999**************998752678*****876 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8  14.5    0.0017       3.4       1      39 []     399     441 ..     399     441 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0017
  zf-RING_UBOX   1 CpIClelft..dPlvl.pCGHtFCreClw.elskslegafkCP 39 
                   C+ICl +    +Pl++ pC+Ht + +C++  +     ++f CP
    KHJ32047.1 399 CSICLCPIApcQPLFVaPCSHTWHYKCIRvIINGPHWPHFICP 441
                   ********888885577***********667788888888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (654 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       841  (0.0469072); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 4331.40
//
Query:       KHJ32048.1  [L=869]
Description: putative flap structure-specific endonuclease protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-27   94.2   0.2      2e-26   92.2   0.0    2.3  2  XPG_I     XPG I-region
    3.9e-24   85.6   0.0    1.2e-23   84.0   0.0    1.9  1  GEN1_C    Holliday junction resolvase Gen1 C-terminal domain
    1.8e-07   31.6   0.0    1.6e-06   28.6   0.0    2.3  2  XPG_N     XPG N-terminal domain


Domain annotation for each model (and alignments):
>> XPG_I  XPG I-region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.2   0.0   3.3e-30     2e-26       2      94 .]     110     200 ..     109     200 .. 0.93
   2 ?   -3.3   0.2       2.1   1.2e+04      58      80 ..     577     598 ..     560     605 .. 0.57

  Alignments for each domain:
  == domain 1  score: 92.2 bits;  conditional E-value: 3.3e-30
                 HHT--EEE-SS-HHHHHHHHHHTTSSSEEE-SSSHHHHTT-SEEEESTT.ECECTT..EEECEEEEEEHHHHHHHHT--HHHHHHHHHHHCET CS
       XPG_I   2 lmgipyvvApgEAEAqcayLqkkglvdaviseDsDlllFGapkvlrnlskkkskkkkekekkkvevidlekvlkelgltreqlidlaillgcD 94 
                 l+g+py+ ApgEAEA+ca Lq++g+vdav+seD D+l+FG++ +lrn+s+++  +k +k+ ++v+ +  ++v +++gl+re +i +a+++g+D
  KHJ32048.1 110 LFGFPYHYAPGEAEAECALLQQNGVVDAVLSEDIDTLMFGSEICLRNWSSED--SKGNKAPTHVSAYYKKDVSDKYGLDREGMILIALMSGGD 200
                 89**********************************************9333..4446899******************************98 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.1
                 ..EEECEEEEEEHHHHHHHHT-- CS
       XPG_I  58 kekekkkvevidlekvlkelglt 80 
                 ++++++k +v+++ek++++ +++
  KHJ32048.1 577 RSNTNTKSKVFEIEKTNQN-SMK 598
                 3344556666666665555.444 PP

>> GEN1_C  Holliday junction resolvase Gen1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.0   0.0     2e-27   1.2e-23       2     104 ..     364     471 ..     363     472 .. 0.89

  Alignments for each domain:
  == domain 1  score: 84.0 bits;  conditional E-value: 2e-27
      GEN1_C   2 vkaIhgrRqhastDgllElRvevvpaqlVaidlsgeegkreepagreglaededdedeeee.....eeasakkkrkkkpydPseperiWipeslvrlga 95 
                 v++I+grR+h+s+Dg+ ElR+ ++p ++V+i+l++e++++++++gr+gla  + + +ee       +++   ++++++ ydP+ p+++W+p++++r g+
  KHJ32048.1 364 VRNICGRRKHFSSDGIDELRLIFHPLDVVGINLDMEQEEPKNDFGRNGLAPRNSEGIEEYLsneddDRPGVSTRKSSTLYDPTLPDKLWVPRTIARIGI 462
                 899**********************************************988888886554665546666677777889******************** PP

      GEN1_C  96 PelVeeyee 104
                 P++Ve+ye+
  KHJ32048.1 463 PLMVEDYED 471
                 *******97 PP

>> XPG_N  XPG N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   2.6e-10   1.6e-06       1      90 [.       1      90 [.       1      95 [. 0.79
   2 ?   -0.3   0.0      0.24   1.5e+03      55      91 ..     632     668 ..     619     674 .. 0.77

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 2.6e-10
                X--TTHHHHHHHH-..GEEEEEGGGGTT....EEEEEEHHHHHHHHHHHSE.ETTEE-BS-HHHHHHHHHHHHHHHTTEEEEEEE--.S--GGGHHH CS
       XPG_N  1 MGikgLlkllkeva..airsvsiealeg....kklaiDaslwlyrfliavreqlgnalentshlmglfsrllrlldfgikPifVFdg.kapdlkkee 90
                MGikg+   +   +  a+ ++++e++e+     ++aiD+ +w  ++  a r+  g a+++      l +rllrl+ + i+P+fVFdg ++p++k+++
  KHJ32048.1  1 MGIKGIYGEIGAGEriALSKMAVEKYEKtgrpLRIAIDVAIWQFQI-QAGRSGSGPAIRT------LYYRLLRLIALTIHPLFVFDGpNKPPFKRKK 90
                9******99988777799*********9885557788888876664.3445566666666......99*******************4466888765 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.24
                 -HHHHHHHHHHHHHHHTTEEEEEEE--S--GGGHHHH CS
       XPG_N  55 tshlmglfsrllrlldfgikPifVFdgkapdlkkeel 91 
                 +s    ++s + ++ + + +P+f  +g+  ++kk++ 
  KHJ32048.1 632 NSSFPNKLSSADKIYKTKSSPVFQINGNCNSNKKSKT 668
                 5556667788889999999*********998887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (869 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       741  (0.0413297); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 6406.41
//
Query:       KHJ32049.1  [L=858]
Description: putative voltage gated chloride channel [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.6e-88  295.3  28.3    6.6e-88  295.3  28.3    1.8  2  Voltage_CLC  Voltage gated chloride channel
    9.1e-09   35.6   0.0    0.00021   21.6   0.0    2.6  2  CBS          CBS domain


Domain annotation for each model (and alignments):
>> Voltage_CLC  Voltage gated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0     0.069   6.2e+02     163     189 ..     111     137 ..      89     147 .. 0.82
   2 !  295.3  28.3   7.3e-92   6.6e-88       1     353 [.     186     568 ..     186     569 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.069
                  GHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Voltage_CLC 163 elilfvllGilgGllgalfvrlllkve 189
                   +i++ l+Gi++G+ +a+ + ++ +++
   KHJ32049.1 111 GWIVVTLIGITIGVNAAFLNIITEWLS 137
                  4678999*********99998887766 PP

  == domain 2  score: 295.3 bits;  conditional E-value: 7.3e-92
                  HHHHHHHHCCCCC-GGGSC-SHHHHHHHCTTSS--..-HHHHHHHHHHHHHHHHCTT-S-BTHHHHHHHHHHHHHHHHHH.TT.--SHHHHH.HHHHH CS
  Voltage_CLC   1 lggllagllvklvapeaagsGipevkaalngvkgp..lslrvllvkflasvltvgsGlslGreGplvqiGAavgsglsrl.lklsrndrdrr.lvaaG 94 
                  +++l+++ lvkl+ap+aagsGi+e+k++++g+  +  l +++l++k +a+ l+++sGls+G+eGp+v+ + + g+++sr+  k++rn ++ r +++a 
   KHJ32049.1 186 IFALISATLVKLLAPYAAGSGISEIKCIIAGFVMKgfLGFWTLIIKSVALPLAIASGLSVGKEGPSVHYAVCTGNVISRVfEKYKRNASKTReILSAC 283
                  689***************************************************************************996666899999999***** PP

                  HHHHHHHHHT-HHHHHHHHCTTTSTSS--TTHHHHHHHHHHHHHHHHHHCTTS-S....-.T---...--GGGHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Voltage_CLC  95 aAAGiAAaFnaPlgGvlfalEevsrefslrallpvfvasvvaalvlrlllgeepa....fgeveslfalsllelilfvllGilgGllgalfvrlllkv 188
                  aAAG+A+aF++P+gGvlf+lEe+s++f l++++++ ++++va+ vl +++  ++     f+ v+   +++++e+++++++G++gG++ga+ ++ +l+v
   KHJ32049.1 284 AAAGVAVAFGSPIGGVLFSLEEISSYFPLKTIWRSYFCALVATAVLAAINPFRTGqlvlFQ-VHYDRSWHFFEIVFYIIIGVFGGIYGAFVIKWNLRV 380
                  *************************************************666644455565.666669****************************** PP

                  HHHHHCHHCHHHHHHHHHHHHHHHHHHHCCCSCC.CSSSSCCH.HHHHC...TT-S-.............HHHHHH...HHHHHHHHHHHHHCTT-CS CS
  Voltage_CLC 189 erlfrkleklkikkrlepalvgllvgllglllpasvlgggyel.iasll...egstl.............llsllllllllllkllataltlgsgvpg 269
                  + +++k+  l  +++le+ l+++ +++++++    +l+  +++ ++ l+   e                 l  +++l+l+++++++++++++g++vp+
   KHJ32049.1 381 QAFRKKY--LTNYAILEATLLATGTAIICYPNM--FLRIDMTQsMEILFlecE---GaedynglcdkdnrLKLVFSLILATVIRTFLVIISYGCKVPA 471
                  **99998..4455788**************974..566666552555554442...2344566777777688999999******************** PP

                  BSHHHHHHHHHHHHHHHHHHHHHH-C............TSSC....HHHHHHCCTHHHHHCCS-HHHHHHHHHHCC--GCCHHHHHHHHHHHHHHHC CS
  Voltage_CLC 270 GifaPsLviGAalGrlvglvlalllp............gaass.dpgafalvGmaaflagvtrapltaiviviEltgdlelllplmlavliAkavad 353
                  Gif+Ps+++GA++Gr vg ++++l+              ++++ +pg++a +G+aa l+g+++ +++++vi++Eltg+l+++lp+m+ v + kav++
   KHJ32049.1 472 GIFVPSMAVGASFGRTVGILVQALYEahptsvffsacqPDVPCiTPGTYAFLGAAAALSGIMHITISVVVIMFELTGALTYILPTMIIVGVTKAVSE 568
                  ************************77888999999**989999***************************************************996 PP

>> CBS  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   3.9e-05      0.35       1      51 [.     600     653 ..     600     659 .. 0.80
   2 !   21.6   0.0   2.4e-08   0.00021       9      55 ..     715     760 ..     706     762 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3.9e-05
                 HHHHSBSSCEEEETT.SBHHHHHHHHHHHTSSEEEEE.ETTTB.EEEEEEHHHH CS
         CBS   1 Vgdimtrdvvtvppd.ttleealelmrekgvsrlPVV.dedgk.lvGivtlrDl 51 
                 V+++m ++++ +p    +l+++ +l++e  + ++P++ d+  k l+G++ ++ l
  KHJ32049.1 600 VSQVMASNIFALPSKgLSLKDIEQLLVEVQYKGFPIIeDKRTKiLLGYIGRTEL 653
                 7999*****877777777*******997779******444445677***99887 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 2.4e-08
                 CEEEETTSBHHHHHHHHHHHTSS.EEEEEETTTBEEEEEEHHHHHHHH CS
         CBS   9 vvtvppdttleealelmrekgvs.rlPVVdedgklvGivtlrDllral 55 
                 ++ v+p+ +l  +le++r+  ++ r+  ++  gkl G+vt +D l++ 
  KHJ32049.1 715 PIRVHPQLSLDTVLEIFRK--IGpRVILIEYHGKLAGLVTVKDCLKYQ 760
                 569**************77..877995589999************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (858 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       934  (0.0520944); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.28s 00:00:00.97 Elapsed: 00:00:00.42
# Mc/sec: 6101.63
//
Query:       KHJ32050.1  [L=197]
Description: hypothetical protein EV44_g0587 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
     0.0028   17.7  21.4     0.0045   17.0  21.4    1.3  1  MARVEL       Membrane-associating domain
  ------ inclusion threshold ------
       0.07   12.8   8.1       0.24   11.1   3.9    2.3  2  Tetraspanin  Tetraspanin family
       0.13   12.5  10.8      0.053   13.8   7.2    1.9  2  DUF4293      Domain of unknown function (DUF4293)


Domain annotation for each model (and alignments):
>> MARVEL  Membrane-associating domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0  21.4   7.5e-07    0.0045       7     142 ..       7     152 ..       4     154 .. 0.71

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 7.5e-07
      MARVEL   7 gilrilqlvfaiiilgliasliakldqllgspssalnfavfvavfsfly.alfllvlylfk.nsaftsilwplidlivdalaallwlvafialaaglrd 103
                 +++r+l+++  i  +g+ a ++        + ++++n  + + v+++++ ++++l++++    ++ +s+    ++ ivd    l++l afia +++lr+
  KHJ32050.1   7 VFWRLLEILTLIPTMGMLAFFV--------NLYARANALTPTYVLCLFIvSVLALAWAIATlFTYHRSATNAHFVAIVD----LFFLGAFIAAVHALRG 93 
                 689*******************........3344555555555555555333333333322223666777777777777....5777777777777777 PP

      MARVEL 104 isca..................fe..snqysasltvrcgqaqaavafgflavllfaasa 142
                 i+                    +    n+ +++ ++ c  ++a+ afg +++l+fa++ 
  KHJ32050.1  94 IASQnctsiksssaysisfgiiGKatLNRFNFRANRQCALLKASFAFGIMNCLFFAITS 152
                 6655666*****9999998776115677888999**********************985 PP

>> Tetraspanin  Tetraspanin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.9     4e-05      0.24      62     106 ..      20      65 ..       6     104 .. 0.80
   2 ?    3.5   0.8    0.0085        51      81     112 ..     137     169 ..      72     193 .. 0.51

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4e-05
                  XXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--HHH CS
                  xxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Tetraspanin  62 llgflGcig.alkenkcllltfsllllvlfllelaagilgfvfsdk 106
                   +g+l ++   + + + l  t++l+l+++ +l la +i +++ +++
   KHJ32050.1  20 TMGMLAFFVnLYARANALTPTYVLCLFIVSVLALAWAIATLFTYHR 65 
                  577777777688899999********************66665555 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.0085
                  XXX..XXXXXXXXXXXXXXX.XXX--HHH...... CS
                  xxx..xxxxxxxxxxxxxxx.xxxxxxxxxxxxxx RF
  Tetraspanin  81 tfs..llllvlfllelaagi.lgfvfsdkargkvs 112
                  +f+  ++ +++f++  a+++  +f++sd+  + + 
   KHJ32050.1 137 SFAfgIMNCLFFAITSALAAiHAFTQSDR--DVYV 169
                  33321444444444444333244444444..3332 PP

>> DUF4293  Domain of unknown function (DUF4293)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   7.2   8.9e-06     0.053      17     123 ..       7     113 ..       1     130 [. 0.64
   2 ?    0.3   0.1      0.13   7.6e+02      85     107 ..     141     163 ..     114     178 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 8.9e-06
     DUF4293  17 aaflflplasivtedellsfyalgvstaeaetsvnvsvwvlvilllliailaliaIflyknRklQlrlclinllllvllyvllal..lllvnkanaaae 113
                 ++  +l++ +++++ ++l+f+   +    a+  + + v+ l+i+++l+   a++++f+y++  + +++++i  l++++ +++++     + +++ ++ +
  KHJ32050.1   7 VFWRLLEILTLIPTMGMLAFFVNLYA--RANALTPTYVLCLFIVSVLALAWAIATLFTYHRSATNAHFVAIVDLFFLGAFIAAVHalRGIASQNCTSIK 103
                 44445556666666666555444444..566667999********************************555555555544444423333333333444 PP

     DUF4293 114 slgesslkig 123
                 s +  s+++g
  KHJ32050.1 104 SSSAYSISFG 113
                 4434444444 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.13
     DUF4293  85 clinllllvllyvllallllvnk 107
                  ++n l++ ++ +l+a+++++++
  KHJ32050.1 141 GIMNCLFFAITSALAAIHAFTQS 163
                 35566666666666666444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1181  (0.0658709); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1370.25
//
Query:       KHJ32051.1  [L=694]
Description: putative diphthamide biosynthesis protein dph2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.8e-79  265.7   0.1    6.1e-78  262.3   0.1    2.1  2  Diphthamide_syn  Putative diphthamide synthesis protein


Domain annotation for each model (and alignments):
>> Diphthamide_syn  Putative diphthamide synthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.013   2.4e+02       1      28 [.      86     120 ..      86     122 .. 0.76
   2 !  262.3   0.1   3.4e-82   6.1e-78      16     302 ..     249     537 ..     235     538 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.013
  Diphthamide_syn   1 fPegllpdsaeiadileef.......gaevvilgD 28 
                      fP+++l d+  ++++l+++         e++i  D
       KHJ32051.1  86 FPDDMLEDAWVVVSNLKKVigqreiaCKETYITKD 120
                      9***************8876755443334787766 PP

  == domain 2  score: 262.3 bits;  conditional E-value: 3.4e-82
  Diphthamide_syn  16 leefgaevvilgDttYGaCcvdevaaehlgadllvHyGhsclspvdrlpvlYvfveieldvehlvetlkknfke.kkkivlvstiqyahaleev 108
                      +ee +++++il+Dt+YG+Ccvde+aaeh++a+++vHyG+sclsp++rlpv+Yvf++  ld++++++++++ f+e + k++l+++++ + +++++
       KHJ32051.1 249 IEEDEVKFYILADTSYGSCCVDEIAAEHIDAQVIVHYGRSCLSPTTRLPVIYVFTSPLLDLDSIIQSFEEVFNEgDPKVILMADVTCHCHIKSI 342
                      4555788*****************************************************************663777**************** PP

  Diphthamide_syn 109 keeleeegyevvkvpqsekplspgevlgctspklkeeeeevdailyigdgrfhllslmlsn.pklpvyrydpyskklteesydakkllrrRyaa 201
                         le++gy++++ p+   +++++ + ++ +++  +   +  +++++++++ +ll ++ s+ +++ +  + p+ +  ++ +    +l rrRy +
       KHJ32051.1 343 YMRLEKRGYTNLIAPEI-VHNPASVIPNRLISSEIN--VKEYSLFHLSEPPPALLLTLNSRvKEMYICPMFPTASLHKSVKTTSVNLFRRRYGL 433
                      *****99**99956655.666666666664444332..244578************9999944433444555555555777888899******* PP

  Diphthamide_syn 202 iekakdakkvGiivgtlgvqgrlelverlkkllkeagkksylvlvgelnpakLanfaeidafVlvaCprlsiddgkeFekPvltpyElevalg. 294
                      ++++++ +++Gi+++tl+v+++l+ +++++ l+k+ag+k+y+++vg++n ak+anf+e+ ++V+++C+++s++d keF++Pv+tp+Ele +l+ 
       KHJ32051.1 434 LNSLNTCSTFGILINTLSVANHLHALDKIQALIKAAGRKYYTFVVGKVNAAKMANFSEVGGWVVIGCWESSLLDCKEFYRPVITPWELEWVLRs 527
                      *********************************************************************************************9 PP

  Diphthamide_syn 295 ..erewteey 302
                         r wt+e+
       KHJ32051.1 528 ekVRVWTGEW 537
                      8888999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (694 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       541  (0.0301746); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.24s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 5009.76
//
Query:       KHJ32052.1  [L=743]
Description: hypothetical protein EV44_g6455 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-22   78.5   8.4    1.4e-21   77.2   8.4    1.7  1  Btz       CASC3/Barentsz eIF4AIII binding


Domain annotation for each model (and alignments):
>> Btz  CASC3/Barentsz eIF4AIII binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.2   8.4   7.6e-26   1.4e-21      22     121 ..     153     256 ..     132     264 .. 0.75

  Alignments for each domain:
  == domain 1  score: 77.2 bits;  conditional E-value: 7.6e-26
         Btz  22 d..eerkrseaekkekeddsnPafvPkrGaFylHDdRtaeteangvrefeks.srvaglivaskv..arrklkdaaeedrWtHDrfeevaseqapksra 115
                 +  ++++++e+e++++++ ++P fvP+rG+F++HD+R+ +++ang+r+f++  +r++  +v + v  ++++  d++ + +WtHD++e + ++ +p+ ++
  KHJ32052.1 153 EkfQDKRKREHEEYKNKRFEDPSFVPNRGSFFMHDHRHSGSAANGFRPFTRGrGRGKLGSVSTFVhnSTNHSHDPS-SVQWTHDMHEIITQPVKPNIHK 250
                 33578999****************************************9665555444444444453445555555.66**********9999998766 PP

         Btz 116 elvssy 121
                 e  ++ 
  KHJ32052.1 251 EDSQNI 256
                 655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (743 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       556  (0.0310112); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.24s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 5502.75
//
Query:       KHJ32053.1  [L=532]
Description: putative bzip transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-16   59.7   1.8    4.9e-16   59.7   1.8    3.3  3  Aft1_HRR  Aft1 HRR domain
    3.1e-15   56.3   1.7    3.1e-15   56.3   1.7    3.3  2  Aft1_HRA  Aft1 HRA domain
    7.6e-11   41.9   4.1      2e-10   40.6   4.1    1.7  1  bZIP_1    bZIP transcription factor
    3.6e-10   40.1   2.1    3.6e-10   40.1   2.1    2.5  3  Aft1_OSA  Aft1 osmotic stress response (OSM) domain
    1.6e-05   24.8   6.8    3.6e-05   23.7   6.8    1.6  1  bZIP_2    Basic region leucine zipper
      0.002   18.6   1.9      0.002   18.6   1.9    2.1  2  bZIP_Maf  bZIP Maf transcription factor
  ------ inclusion threshold ------
      0.018   15.4   2.2      0.041   14.2   1.8    1.7  1  THOC7     Tho complex subunit 7
       0.19   10.2  22.3       0.28    9.7  22.3    1.2  1  Macoilin  Macoilin family


Domain annotation for each model (and alignments):
>> Aft1_HRR  Aft1 HRR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.2       3.6   8.1e+03      19      53 ..      20      62 ..      10      73 .. 0.54
   2 !   59.7   1.8   2.2e-19   4.9e-16       2      71 .]     214     277 ..     213     277 .. 0.92
   3 ?    1.4   0.7      0.32   7.2e+02      21      40 ..     372     393 ..     329     416 .. 0.66

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 3.6
    Aft1_HRR 19 kre.atsnavtsqPqeapngadavkaeakpa........sdpFd 53
                kre +++n+   +P++ ++ ++++   ++p         +d+F 
  KHJ32053.1 20 KREsPKQNNLIRKPDDIKSEKKES-LAPPPRlgqpsvqsADYFS 62
                444455666667776666655422.2222213333344456665 PP

  == domain 2  score: 59.7 bits;  conditional E-value: 2.2e-19
    Aft1_HRR   2 atPstldFhrtAlsaaakre.atsnavtsqPqeapngadavkaeakpasdpFdphDandAAngLflLAqgr 71 
                 +tPst++Fhr A++a+++++ +++++ tsqPqe+ n  d      kp    Fd  Dan+AA gLflLAq r
  KHJ32053.1 214 QTPSTIEFHRVAINAQKRNQpPQQSNTTSQPQEHVNAID-----VKPVPCNFD--DANAAASGLFLLAQSR 277
                 8*************999999888999********99986.....8888899**..**************75 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.32
    Aft1_HRR  21 e..atsnavtsqPqeapngada 40 
                 +  a+ n++tsq +e+p  +d 
  KHJ32053.1 372 SkkAKINNATSQVTENPTSEDD 393
                 1444445666665555555442 PP

>> Aft1_HRA  Aft1 HRA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.9       2.1   4.8e+03      42      72 ..      78     105 ..      36     110 .. 0.58
   2 !   56.3   1.7   1.4e-18   3.1e-15       7      69 ..     122     196 ..     117     205 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 2.1
    Aft1_HRA  42 sfrtGfTPgtsslrtglTPggggssfPapSp 72 
                 sf  G   +t+      TPg  g+ +P+ S 
  KHJ32053.1  78 SFAGGSSGNTN-GGNIQTPG--GTRLPPVSN 105
                 34444433333.22334666..477777665 PP

  == domain 2  score: 56.3 bits;  conditional E-value: 1.4e-18
    Aft1_HRA   7 WlatqslrsgPLSPAmLagPqqasqspt..........eesf...esesfrtGfTPgts.slrtglTPggggssfPa 69 
                 W+ ++slrsgP+SPAm+ gPq+ ++              + f   +++++r GfTP+   ++r+glTPgg+g++fP 
  KHJ32053.1 122 WG-ANSLRSGPVSPAMIGGPQKPADD-YfvdghhirdlRSGFitaNESALRSGFTPEAEsNVRAGLTPGGSGTMFPE 196
                 98.89****************66543.26999******444444477899******98769***************6 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   4.1   9.1e-14     2e-10       5      61 ..     412     468 ..     408     471 .. 0.91

  Alignments for each domain:
  == domain 1  score: 40.6 bits;  conditional E-value: 9.1e-14
                 XXXXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 KrekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekLks 61 
                 Kr+  +++NR+aA ++RqRK++  + L+ +v++  +eN+ L  +++ l++e+   k+
  KHJ32053.1 412 KRKNFLERNRIAALKCRQRKKQWLNSLQAKVEVYASENEGLNAQIQALRDEIVHIKT 468
                 6777789********************************************988776 PP

>> Aft1_OSA  Aft1 osmotic stress response (OSM) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.1   2.1   1.6e-13   3.6e-10       3      56 ..      38      87 ..      36      88 .. 0.86
   2 ?   -1.6   0.0       1.7   3.8e+03      17      32 ..     140     152 ..     126     157 .. 0.66
   3 ?   -3.8   1.1         8   1.8e+04       9      18 ..     232     241 ..     226     247 .. 0.53

  Alignments for each domain:
  == domain 1  score: 40.1 bits;  conditional E-value: 1.6e-13
    Aft1_OSA  3 aeaakplapPpRpaqqqqsdntpDYFssvhntgslslEPNPFEqSFgggsdaeT 56
                +e++++lapPpR +  q+s +++DYFss h+  +   E NPF+ SF+ggs+ +T
  KHJ32053.1 38 SEKKESLAPPPRLG--QPSVQSADYFSSSHSHLA--SEANPFDFSFAGGSSGNT 87
                58899*********..6666689*****976655..**********99998887 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.7
    Aft1_OSA  17 qqqqsdntpDYFssvh 32 
                  q+++d   DYF   h
  KHJ32053.1 140 PQKPAD---DYFVDGH 152
                 444556...9*98776 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 8
    Aft1_OSA   9 lapPpRpaqq 18 
                   pP+ ++ +
  KHJ32053.1 232 NQPPQQSNTT 241
                 4555555533 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   6.8   1.6e-08   3.6e-05      10      54 .]     417     462 ..     408     462 .. 0.89

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 1.6e-08
                 X.XXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2  10 r.kNreAarrsRekkkakeeeleervkeLeeeNaqLrqkveqLeke 54 
                   +Nr+Aa ++R++kk+  ++l+ +v+   +eN+ L +++++L+ e
  KHJ32053.1 417 LeRNRIAALKCRQRKKQWLNSLQAKVEVYASENEGLNAQIQALRDE 462
                 449****************************************987 PP

>> bZIP_Maf  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       5.3   1.2e+04      38      54 ..     363     379 ..     357     398 .. 0.46
   2 !   18.6   1.9   8.9e-07     0.002      37      80 ..     419     462 ..     411     469 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 5.3
    bZIP_Maf  38 Nrgyakscrkrrlqqke 54 
                 +++ +k + +++ +  +
  KHJ32053.1 363 SEVSTKASSSKKAKINN 379
                 33333333333333222 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 8.9e-07
    bZIP_Maf  37 KNrgyakscrkrrlqqkeelekekeeleeelerlqqelsrlrqe 80 
                 +Nr +a +cr+r+ q  ++l+++ e  + e+e l++++++lr e
  KHJ32053.1 419 RNRIAALKCRQRKKQWLNSLQAKVEVYASENEGLNAQIQALRDE 462
                 8***************************************9987 PP

>> THOC7  Tho complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   1.8   1.8e-05     0.041      58     101 ..     430     473 ..     376     476 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.8e-05
       THOC7  58 rlqllakanerereryeaekeeieseieavreeieelkaqLeea 101
                 r + ++++ + ++e y+ e+e ++++i+a+r+ei+  k+ L + 
  KHJ32053.1 430 RKKQWLNSLQAKVEVYASENEGLNAQIQALRDEIVHIKTLLLAH 473
                 8899**********************************998765 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7  22.3   0.00013      0.28     218     442 ..     242     472 ..     220     480 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00013
    Macoilin 218 eqlaaakelvevdpvalsknnhslnkkdsslklpeleyrekkksakssrsdskkkhehn....esvdsklqekeymenkskskrlskses.sgsesell 311
                  q +   ++++v+pv  + ++++ + +     l++  ++++++++ + ++++   h+h     +++d+k +e++ + ++ k   +s+s+  ++s+se  
  KHJ32053.1 242 SQPQEHVNAIDVKPVPCNFDDANAAAS-GLFLLAQSRESSQSNNQYALTNNQLPIHAHPvikkNDKDDKSTENSPVLQHRKGLSISNSSRgDDSASEND 339
                 223333333445555544444444432.23334444444444444444455555566556766666777777777777766666655543133344444 PP

    Macoilin 312 veesvkskssssssssnknskkasagsagssnssskkhsessksvtsssssknskkqklpaGkssa..alkdaaenslpnnqlskkdalvrLeadikkL 408
                 v++s    +s +ss  ++  +kas  s+++s+s  +k ++++++vt+  +s+++  ++   G  ++  + +++ +n l  n+++  +   r  + ++ L
  KHJ32053.1 340 VNKSQLRDQSKKSSPGTSGRRKASEVSTKASSSKKAKINNATSQVTENPTSEDDTGNNSEHGTDGKkiTDEEKRKNFLERNRIAALKCRQRKKQWLNSL 438
                 444444444444444445666666667777777777888888999999999998888887887777557778899************************ PP

    Macoilin 409 kaeLqasrqteqelrskissltseerslkselqq 442
                 +a+++     ++ l+ +i++l  e   +k+ l +
  KHJ32053.1 439 QAKVEVYASENEGLNAQIQALRDEIVHIKTLLLA 472
                 ********************99988888877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1626  (0.0906911); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.41
# Mc/sec: 3879.65
//
Query:       KHJ32054.1  [L=141]
Description: hypothetical protein EV44_g5459 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       247  (0.0137766); expected 358.6 (0.02)
Passed bias filter:                      240  (0.0133861); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1076.85
//
Query:       KHJ32055.1  [L=272]
Description: hypothetical protein EV44_g6416 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       665  (0.0370907); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 2212.87
//
Query:       KHJ32056.1  [L=330]
Description: putative atp phosphoribosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-54  182.9   0.2    6.6e-54  182.2   0.2    1.4  1  HisG      ATP phosphoribosyltransferase
    5.9e-28   96.8   0.4    1.4e-27   95.7   0.4    1.7  1  HisG_C    HisG, C-terminal domain


Domain annotation for each model (and alignments):
>> HisG  ATP phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.2   0.2   7.4e-58   6.6e-54       1     160 []      58     252 ..      58     252 .. 0.94

  Alignments for each domain:
  == domain 1  score: 182.2 bits;  conditional E-value: 7.4e-58
                 -GGGHHHHHHTTSSSEEEEEHHHHHHC........................T...TEEEEEEESESEEEEEEEEETTSS--SGCGG.TT-.EEEEES-H CS
        HisG   1 raadiptyVeegavdlGitGkDvveEs........................keeeeveelldLgfgkcklvvavpeesevkslkdlvedkgkriaTsyp 75 
                 +a+dipt+V+eg+v lGitG+D+v+E                         + +  + e++dL+fg ckl+v+vpe+  +k+  dl   +gk+i+Ts++
  KHJ32056.1  58 PASDIPTFVGEGRVSLGITGRDTVAEYmssverknrkrtelgklrvdsealDIKCGCREIMDLNFGMCKLQVQVPENGAYKKPMDL---IGKNIGTSFV 153
                 689***********************5557889999************99977889********************9999988877...899******* PP

                 HHHHHHHHHT...............T-EEEEEE-SS-CTHHHHTTS-SEEEEEESSSHHHHHTTEEEEEEEEEEEEEEEEEHHHHHSHHHHHHHHHHHH CS
        HisG  76 nlakkyfeek...............glkveiiklsGsvEaapalglaDaIvDlvetGeTLrangLkaietilessavLiankkslkkkekieellerlr 159
                 nlak+yf+++                lk+++i+lsGsvEaa+alg+aD+IvDlve+GeT++a+gLkai+t+++s+a+Li+n +s + ke+i+ +++rlr
  KHJ32056.1 154 NLAKDYFSSLektamkltngeaakaTLKTNVIELSGSVEAACALGVADGIVDLVESGETMKAAGLKAIDTVVNSTAILIQNFHSSD-KEMIDLIVSRLR 251
                 *********988999888888888888****************************************************9999997.89*********9 PP

                 H CS
        HisG 160 g 160
                 g
  KHJ32056.1 252 G 252
                 6 PP

>> HisG_C  HisG, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.7   0.4   1.5e-31   1.4e-27       1      73 []     256     328 ..     256     328 .. 0.99

  Alignments for each domain:
  == domain 1  score: 95.7 bits;  conditional E-value: 1.5e-31
                 TTTEEEEEEEEEGGGHHHHHHH---SSS-EEEE-.SS-EEEEEEEEECCCHHHHHHHHHCTT-EEEEEEE-S- CS
      HisG_C   1 ArkyvllmynvpkesleevlkilPGlrsPTvspladegwvaVsavveekevaevideLkaaGAsdIlvlpiek 73 
                 A+kyvl++ynv +++le+++ki+PG+r++T++ l+degwvaVsa+ve++ +a+ +d+L  +GA+dIlv++i++
  KHJ32056.1 256 AQKYVLCQYNVARSNLEAAIKITPGKRAATITALEDEGWVAVSAMVEKNSIASSMDKLSLIGAEDILVIKITN 328
                 9**********************************************************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2424.50
//
Query:       KHJ32057.1  [L=1164]
Description: hypothetical protein EV44_g0703 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-57  193.7   1.1    5.5e-57  192.8   0.2    1.9  2  RasGEF    RasGEF domain
    2.1e-29  101.9   0.3    6.8e-29  100.2   0.3    1.9  1  RasGEF_N  RasGEF N-terminal motif
    1.6e-15   56.6   0.2    3.3e-15   55.7   0.2    1.6  1  SH3_9     Variant SH3 domain
      6e-15   54.6   0.2    1.4e-14   53.4   0.2    1.7  1  SH3_1     SH3 domain
    4.5e-12   45.5   0.1      1e-11   44.3   0.1    1.7  1  SH3_2     Variant SH3 domain
    0.00042   20.4   0.0    0.00083   19.4   0.0    1.5  1  WW        WW domain


Domain annotation for each model (and alignments):
>> RasGEF  RasGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.2   3.6e+03      66      94 ..     510     537 ..     468     541 .. 0.75
   2 !  192.8   0.2   1.8e-60   5.5e-57       1     176 [.     913    1094 ..     913    1095 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.2
      RasGEF  66 viekfikiakecrklnNfnslmailsaLq 94 
                 +i++ i  a   r l +f s+++i+  ++
  KHJ32057.1 510 AISNNICSAI-KRVLEDFKSWISIVESIN 537
                 5555554444.366899999999998876 PP

  == domain 2  score: 192.8 bits;  conditional E-value: 1.8e-60
      RasGEF    1 elAeqltlieaelfskikpeellgsawsked...rs...pnveaviarfnrlsnwvaseilseeslkkRakviekfikiakecrklnNfnslmails 91  
                  e+A+qlt+ie++l+ kikp+e+l+++w+++    ++   pn++a+i ++n+l+nw+a+ ils+++lkkR+ v+++f+ i ++cr+lnNf++l +i+s
  KHJ32057.1  913 EFARQLTIIESRLYGKIKPTECLSKTWQRKIiesDAepaPNIKALILHSNQLTNWIAEIILSQADLKKRVAVLKHFVYISDKCRQLNNFSTLTSIIS 1009
                  79*************************987786511678********************************************************** PP

      RasGEF   92 aLqsspvsrLkktweavskkslktleeleelmspennfknyrealkssasskpciPflglyltdltfieegnpdtl.egk.iNfeKr 176 
                  aL ++p++rLk+tw++++ k++++le++++lm +++nf +yre l+ +  + pc+Pf+g+yltdltfie+g p+ + + + iNf Kr
  KHJ32057.1 1010 ALGTAPIHRLKRTWDQIPAKTIAVLESMRKLMASTKNFGEYRESLHLA--NPPCLPFFGVYLTDLTFIEDGIPSIIkKSTlINFAKR 1094
                  **********************************************99..7999*******************99975557****97 PP

>> RasGEF_N  RasGEF N-terminal motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.2   0.3   2.3e-32   6.8e-29       1     100 [.     744     845 ..     744     850 .. 0.91

  Alignments for each domain:
  == domain 1  score: 100.2 bits;  conditional E-value: 2.3e-32
    RasGEF_N   1 qvkagtlekLierLtskrlldddfletFLltyrsFttpaeLlekLieryeinppnnlesdesnswnsksssnirlrvlsvlkewvenhyy.d.fsddka 97 
                 q+k+gtl +L+e+Lt++++ld++f++tFLltyrsFtt+ eL+++L++r++i+pp++ ++++++ w+++++++ir+rv+++lk+w++n++  d  ++ k+
  KHJ32057.1 744 QLKGGTLVALVEQLTRHDKLDSNFNNTFLLTYRSFTTARELFGLLVQRFQIQPPSGISQSDYEIWRDRKQRPIRFRVVNILKSWFDNFWMeDqSEETKV 842
                 689**************************************************************************************9752444444 PP

    RasGEF_N  98 lls 100
                 l+ 
  KHJ32057.1 843 LIR 845
                 555 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   0.2   1.1e-18   3.3e-15       1      47 [.      17      63 ..      17      65 .. 0.98

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 1.1e-18
       SH3_9  1 AlypyepreddeLsLqrGDvitvieesedgWlegsltGrtGlvPany 47
                Aly+y+ ++++ Ls+++GDvi vi + e+gW++g+ +G +G++P+ny
  KHJ32057.1 17 ALYDYDTDDQTSLSFREGDVIQVITQLESGWWDGIINGVRGWFPSNY 63
                8********************************************** PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.4   0.2   4.8e-18   1.4e-14       1      48 []      16      61 ..      16      61 .. 0.98

  Alignments for each domain:
  == domain 1  score: 53.4 bits;  conditional E-value: 4.8e-18
                EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEEG CS
       SH3_1  1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgtgkeGliPs 48
                +AlYDY+  ++  Lsf++GDvi+v+ + e+gWw+g  +  g +G++Ps
  KHJ32057.1 16 RALYDYDTDDQTSLSFREGDVIQVITQLESGWWDGIIN--GVRGWFPS 61
                7*************************************..69*****8 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   0.1   3.4e-15     1e-11       1      57 []      14      67 ..      14      67 .. 0.94

  Alignments for each domain:
  == domain 1  score: 44.3 bits;  conditional E-value: 3.4e-15
                EEEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEECCCEEEEEGCGEEEE CS
       SH3_2  1 yvraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegevgGrvGlfPsslveeq 57
                +vra+ dy+  d + Lsf++Gdvi+v+    +   gww g  +G++G+fPs++++++
  KHJ32057.1 14 FVRALYDYDTDDQTSLSFREGDVIQVI---TQLESGWWDGIINGVRGWFPSNYCQVI 67
                69*************************...66777******************9985 PP

>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   2.8e-07   0.00083       5      27 ..     136     157 ..     136     161 .. 0.91

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 2.8e-07
                 EEEEE-TTTT-EEEEETTT--EE CS
          WW   5 WeeqwdpdsGrvYYyNheTgetq 27 
                 W+ q ++d Gr +Y+N+eTget+
  KHJ32057.1 136 WIPQATSD-GRLFYFNTETGETS 157
                 889999**.*************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1164 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.75u 0.28s 00:00:01.03 Elapsed: 00:00:00.44
# Mc/sec: 7988.71
//
Query:       KHJ32058.1  [L=790]
Description: hypothetical protein EV44_g1012 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-16   60.4   3.3    2.8e-16   59.4   3.3    1.6  1  Fungal_trans  Fungal specific transcription factor domain
    7.6e-09   35.6  11.9    3.9e-06   27.0   4.7    3.0  2  zf-H2C2_2     Zinc-finger double domain
    0.00058   20.2  14.1      0.039   14.4   5.3    2.9  2  zf-C2H2       Zinc finger, C2H2 type
     0.0076   16.9   1.4       0.24   12.1   0.1    2.5  2  zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
  ------ inclusion threshold ------
       0.52   11.3  20.8       0.26   12.2   4.1    3.4  3  zf-C2H2_4     C2H2-type zinc finger
       0.62   10.4   3.7        1.3    9.4   3.7    1.6  1  zf-C2H2_jaz   Zinc-finger double-stranded RNA-binding
        1.4    9.1   4.1          4    7.6   4.1    1.8  1  Zn-ribbon_8   Zinc ribbon domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   3.3   1.1e-19   2.8e-16       1     207 [.     305     500 ..     305     567 .. 0.76

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 1.1e-19
  Fungal_trans   1 ldrffsnfhpqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsL 97 
                   l+++fs fh+++p+lh  sf+p+            sp llla+l++Galf+ ++++   +  +  s   + ++l+      e+fss  + lw+ qs 
    KHJ32058.1 305 LSSYFSLFHHHLPFLHLASFNPTR----------VSPSLLLAVLSIGALFVFDQQQA--YICHIGSKVLVNQFLQN----KENFSSRKCPLWTMQSS 385
                   799*********************..........*****************998865..57777776778788887....57999************ PP

  Fungal_trans  98 lllelyektssdralher.......hhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrpp.llddsqinlpLP 186
                   ll  ++ ++s+d ++ e        + +++   +++l+L   ++++g   +   w+e  e  rR+++a++++  ++ l ++++p + +++  +l+LP
    KHJ32058.1 386 LLNMIFASWSGDPKGLEWacsikslLANMVAGNRYELKLR-TEAREGLQPSRAEWVE-DEGCRRTYYAVYIFFGLLTLTYNHTPaIAFNELEDLALP 480
                   ************7777775887774444444466666664.4445554448999999.9999*********************************** PP

  Fungal_trans 187 cddddlwesddaseetlvetk 207
                     +  +w+ + ++ + + ++k
    KHJ32058.1 481 STEA-IWSLSIDDDIWDERIK 500
                   ****.9988777665555544 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.7     9e-05      0.23      11      25 ..      20      34 ..      12      35 .. 0.88
   2 !   27.0   4.7   1.5e-09   3.9e-06       3      26 .]      40      63 ..      38      63 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 9e-05
   zf-H2C2_2 11 gekpyeCplCdkaFk 25
                +ek+y+C +C+ aF+
  KHJ32058.1 20 PEKKYKCQFCNRAFS 34
                79************8 PP

  == domain 2  score: 27.0 bits;  conditional E-value: 1.5e-09
   zf-H2C2_2  3 rrHirkHtgekpyeCplCdkaFkt 26
                +rH r+Ht+e+p++C++C+ +F++
  KHJ32058.1 40 SRHERSHTKERPFQCMKCRSTFVR 63
                8*********************85 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   5.3   1.5e-05     0.039       1      23 []      24      46 ..      24      46 .. 0.99
   2 !   10.1   1.5   0.00036      0.91       1      23 []      52      75 ..      52      75 .. 0.93

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.5e-05
                EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCpdCgksFkrksnLkrHirtH 23
                ykC  C++ F+r+++  rH r+H
  KHJ32058.1 24 YKCQFCNRAFSRSEHRSRHERSH 46
                9********************99 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00036
                EEETTTTEEESSHHHHHHHHHC.C CS
     zf-C2H2  1 ykCpdCgksFkrksnLkrHirt.H 23
                ++C +C  +F r+++L rH rt H
  KHJ32058.1 52 FQCMKCRSTFVRRDLLLRHDRTvH 75
                89*****************77777 PP

>> zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.4     0.038        98      88     121 ..      10      43 ..       2      48 .. 0.73
   2 !   12.1   0.1   9.5e-05      0.24      31      62 ..      50      81 ..      35     118 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.038
  zf-C2H2_3rep  88 svennsenesgvrkfvcrfcGlkfdllpdlGrhh 121
                   s  ++s+    ++k+ c+fc   f       rh 
    KHJ32058.1  10 SSIKKSSTLVPEKKYKCQFCNRAFSRSEHRSRHE 43 
                   334666777789********99998777777775 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 9.5e-05
  zf-C2H2_3rep 31 lllqcipcgshfgnaeelwlhvlsvhpsdfkl 62
                    +qc+ c+s f   + l+ h  +vh++d   
    KHJ32058.1 50 RPFQCMKCRSTFVRRDLLLRHDRTVHAKDGGI 81
                  568***********************998544 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   4.1    0.0001      0.26       1      23 [.      24      46 ..      24      47 .. 0.92
   2 ?   10.8   1.1    0.0003      0.76       1      24 []      52      75 ..      52      75 .. 0.97
   3 ?   -4.0   1.3         7   1.8e+04      11      19 ..     306     314 ..     303     316 .. 0.62

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.0001
   zf-C2H2_4  1 fkCpiCgksFsskkaLlrHlkth 23
                +kC +C++ Fs++++ +rH ++h
  KHJ32058.1 24 YKCQFCNRAFSRSEHRSRHERSH 46
                89********98888899***99 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.0003
   zf-C2H2_4  1 fkCpiCgksFsskkaLlrHlkthH 24
                f+C  C+ +F +++ LlrH +t+H
  KHJ32058.1 52 FQCMKCRSTFVRRDLLLRHDRTVH 75
                89*******************999 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 7
   zf-C2H2_4  11 sskkaLlrH 19 
                 ss+ +L +H
  KHJ32058.1 306 SSYFSLFHH 314
                 467778776 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   3.7   0.00052       1.3       1      24 [.      23      46 ..      23      48 .. 0.94

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00052
                 ECBBTTTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz  1 qfYCvlCdKyFksenaldnHlkSK 24
                 ++ C+ C++ F+ ++    H++S+
   KHJ32058.1 23 KYKCQFCNRAFSRSEHRSRHERSH 46
                 699*******************96 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   4.1    0.0015         4       6      38 ..      24      64 ..      23      66 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0015
  Zn-ribbon_8  6 YrCeeCghefe......vlqsisdaplta.CPeCgs.evrr 38
                 Y+C+ C++ f       +  +++ ++ +  C +C s  vrr
   KHJ32058.1 24 YKCQFCNRAFSrsehrsRHERSHTKERPFqCMKCRStFVRR 64
                 ***********9887753333444456667*****955555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (790 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       754  (0.0420548); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 5522.57
//
Query:       KHJ32059.1  [L=327]
Description: putative mitochondrial nuclease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.4e-65  219.7   0.0    5.4e-65  219.4   0.0    1.1  1  Endonuclease_NS  DNA/RNA non-specific endonuclease


Domain annotation for each model (and alignments):
>> Endonuclease_NS  DNA/RNA non-specific endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.4   0.0     3e-69   5.4e-65       3     224 ..      62     290 ..      60     292 .. 0.97

  Alignments for each domain:
  == domain 1  score: 219.4 bits;  conditional E-value: 3e-69
                      HCCTTCS-TTSTTSEEEE-SSEEEEEETTTTEEEEEEEEESCGGGSS-TT--GG---B--TTS-CCSG---HHHCTTS.SSEEEESS-GGG--S CS
  Endonuclease_NS   3 seltskgfptsgddkvlfykgfsvsynkerriplwvaenldgasvnasaaerrgpsfkadpripqlsfrtqysdyagskgldRGHLaaaadfkf 96 
                      + ++++gfp++++d +  +k   +sy+++ r+p+wvae+++++s+++ +a+r+ + f +d++ip++ fr++ +dya+s g+dRGH+++aad k+
       KHJ32059.1  62 AGIYQYGFPGPVAD-LAQRKALISSYDRRLRNPHWVAEHITPSSLKSPEADRKLSVFMEDESIPEK-FRGKLKDYARS-GYDRGHQVPAADLKW 152
                      6789*********9.99*******************************9988999***********.***********.9************** PP

                      SHHHHHHTTBGGGEEEE-HH.HHCTHHHHHHHHHHHHHCTTS.EEEEEEEEES-ECC-.........EEEETT.TTEE--SEEEEEEEEECCTT CS
  Endonuclease_NS  97 steanaatfnytNivPQvag.fNqgnWlrlEnlvrklvrkydrklyvvtGpvfvprll.........yeligk.nkvavPthfwkvilsedadd 179
                      s++a+++tf+++N++PQv + fN+ +W+++E+++r+l+++y  ++++vtGp++ p+++         ye+ig+  ++avPthf+kvi+ e++++
       KHJ32059.1 153 SQNAMNETFYLSNMCPQVGEgFNREYWAHFEDFCRRLTQRYP-SVRIVTGPLYLPKKDntdgkwrvnYEVIGNpPNIAVPTHFYKVIFAENETA 245
                      *****************************************9.9************************************************88 PP

                      TCEECCEEEEEESSSS-TTS-GGGGB--HHHHHHHHT--TTTTS- CS
  Endonuclease_NS 180 kgtlnaaafllpnepiaderpltayqvpvdeleeltGldffcnva 224
                       + +   af+lpn pi++++p+t+++vp++ +e+++Gl+f++ ++
       KHJ32059.1 246 SSPVALGAFVLPNTPIPNSKPITDFEVPLETVERASGLEFANLLP 290
                      8***************************************99776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2321.90
//
Query:       KHJ32060.1  [L=687]
Description: putative peroxin 8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (687 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 5080.14
//
Query:       KHJ32061.1  [L=661]
Description: putative snornp assembly factor naf1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-44  150.1   0.7    3.9e-44  150.1   0.7    2.4  2  Gar1      Gar1/Naf1 RNA binding region


Domain annotation for each model (and alignments):
>> Gar1  Gar1/Naf1 RNA binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   1.8      0.15   2.8e+03     102     144 ..     229     274 ..     202     279 .. 0.58
   2 !  150.1   0.7   2.2e-48   3.9e-44       8     153 ..     325     468 ..     320     469 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.15
                 X...XXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        Gar1 102 d.lplerfllteelkkk..kgpdasnendeElpeeevefsdDekea 144
                 +  ++++ ++ ee +++  + + +   + +E ++ e++ s D+ ea
  KHJ32061.1 229 TdVEDSNVVVSEEANMEweADSSPIEDSSDEQDSSENNTSSDDSEA 274
                 3566777777666666633333444445556666666666666665 PP

  == domain 2  score: 150.1 bits;  conditional E-value: 2.2e-48
                 --TT----TTS-EEEEEEEEEEETTEEEEEE---S--B--BTT-EEEETT--EEEE--EEES-SSS-EEEEE--GGHHHHHHHTTTTSEEEEE-X..XX CS
        Gar1   8 ekedieigppeevleiGtvssivenevviksttsgekkvldfnsilflenktqiGkVdEifGpvnepyysVklnsseeikaksfkvgdkvyiapdlple 106
                  k++++i+++++++e+G v+++v+n ++ik++ sge+kvl+ +s+l+l+++++ G V E++G+v++pyysV +++++ei+a+++++g+ vy++    ++
  KHJ32061.1 325 LKPNVTITQDMPITELGAVEQVVDNILLIKAKISGEYKVLESGSVLCLSDRKVFGAVAETIGRVQQPYYSVLFTDATEIQAEGLSIGTIVYYSEI--HS 421
                 578999*****************************************************************************************..** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        Gar1 107 rfllteelkkkkgpdasnendeElpeeevefsdDekeaeakkkkkgk 153
                 +f++t++lk  kg+dasn ndeE+ e+evefsdDe+eae+++k k k
  KHJ32061.1 422 TFVFTKSLKAFKGSDASNINDEEVGEDEVEFSDDEAEAEHRRKIKLK 468
                 ******************************************98865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (661 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       956  (0.0533214); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4658.16
//
Query:       KHJ32062.1  [L=1116]
Description: putative la domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.5e-18   64.3   0.7    1.8e-17   63.1   0.3    1.9  2  La              La domain
  ------ inclusion threshold ------
       0.04   13.8   0.0       0.07   13.0   0.0    1.3  1  HMG_CoA_synt_N  Hydroxymethylglutaryl-coenzyme A synthase N t


Domain annotation for each model (and alignments):
>> La  La domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.1     1e+04      27      37 ..     336     346 ..     331     348 .. 0.78
   2 !   63.1   0.3     2e-21   1.8e-17       3      58 ..     665     718 ..     663     719 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.1
                 STTS---HHHH CS
          La  27 dpegwVplsli 37 
                 ++e+wVp+ +i
  KHJ32062.1 336 QKEKWVPVPYI 346
                 4589***9877 PP

  == domain 2  score: 63.1 bits;  conditional E-value: 2e-21
                 HHHHHHHHTT-TTT-HHHHHHHTTSTTS---HHHHHTSSHHHHHHSSHHHHHHHHH CS
          La   3 kQvEfYFSdeNLpkDkFLrkkmdkdpegwVplsliasfkrmkkltkdveliaealr 58 
                  Q+E+YFS +NL+kD +Lrk+md+  +g+V ls+ia fkr+ +lt+d+eli  a++
  KHJ32062.1 665 MQLEYYFSIDNLCKDVYLRKHMDS--QGFVYLSFIAGFKRIVALTQDFELIRFACQ 718
                 6**********************9..9************************98887 PP

>> HMG_CoA_synt_N  Hydroxymethylglutaryl-coenzyme A synthase N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   7.8e-06      0.07      32      97 ..      33     102 ..      21     106 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 7.8e-06
  HMG_CoA_synt_N  32 agkytiglgqtrm.gfvsdredinslsltvvqkllertk..l.dydaigrlevgtetiidksksvksvlm 97 
                     +  y++ + q+ m + ++  +d nsl+ t  q+ +++ +  + +++a+ rle  tet+   sk+++s l 
      KHJ32062.1  33 TAAYAVQMNQSTMnSSIASTKDTNSLASTPSQNSVREDRsaIeSIEALSRLETPTETLALESKTIHSELT 102
                     56799*****99944688999*********9999875541142468899*****************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       774  (0.0431703); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.27s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 7518.86
//
Query:       KHJ32063.1  [L=121]
Description: hypothetical protein EV44_g2440 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      0.003   17.4   8.2     0.0034   17.3   8.2    1.1  1  Tma16            Translation machinery-associated protein 16
  ------ inclusion threshold ------
      0.033   14.4   3.9      0.031   14.5   3.2    1.3  1  Pep_M12B_propep  Reprolysin family propeptide
      0.054   14.1   7.6      0.058   14.0   7.6    1.1  1  Striatin         Striatin family
       0.12   12.3   1.0       0.25   11.3   1.0    1.5  1  DUF3926          Protein of unknown function (DUF3926)
       0.41   10.9   4.8        5.6    7.3   0.3    2.3  2  XhlA             Haemolysin XhlA


Domain annotation for each model (and alignments):
>> Tma16  Translation machinery-associated protein 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   8.2   9.6e-07    0.0034      20     123 ..       3     109 ..       1     118 [. 0.84

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 9.6e-07
       Tma16  20 lRdeklakkkkerakkkssllervkffqealdeekkplsleelkelie.ky.lkRndeeleelkserr..kgrpkskreelleekkereeeeyet.Gfe 113
                  R ekl+kk+++ +k++++++++++f+qe+l++   +++le  +elie +y ++ + ++ e   ser+   +  k++     +++ e   + ++t    
  KHJ32063.1   3 TRLEKLEKKSRQAEKRQQQQAKIFNFLQEKLSS--REFQLEPRSELIEpQYsIETKVKDHEDSSSERKatASLHKHESPHEFRQRSEFSSRSFSTrIES 99 
                 799*****************************9..69***********977699999999999999962244555566667888888888999994445 PP

       Tma16 114 vpDLtdeenv 123
                 vp++t+ +n+
  KHJ32063.1 100 VPNITEDQNL 109
                 8899988886 PP

>> Pep_M12B_propep  Reprolysin family propeptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   3.2   8.6e-06     0.031      22      82 ..       9      69 ..       1      80 [. 0.83

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 8.6e-06
  Pep_M12B_propep 22 krrrRslseeeekeerlsyrlkafgkefhLnLepnsellapgftvethredgeereespqe 82
                     +++ R+++++++++++++  l+ + +   ++Lep sel+ p++++et+ +d e ++++++ 
       KHJ32063.1  9 EKKSRQAEKRQQQQAKIFNFLQEKLSSREFQLEPRSELIEPQYSIETKVKDHEDSSSERKA 69
                     56778888888889********************************999998776665544 PP

>> Striatin  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   7.6   1.6e-05     0.058      30     118 ..       1      81 [.       1     118 [. 0.56

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.6e-05
    Striatin  30 mkarIakLegerrgaenlkkdlvrrikmLEyalkqerakylklkegtsaakenkkkekeeeeaeeeekseeeskskekksakeslkkse 118
                 mk r  kLe + r+ae+ ++++ + ++ L+ +l  ++ +     e  +++ + ++k k++e ++        s++k+++s+ ++ +++e
  KHJ32063.1   1 MKTRLEKLEKKSRQAEKRQQQQAKIFNFLQEKLSSREFQLEPRSELIEPQYSIETKVKDHEDSS--------SERKATASLHKHESPHE 81 
                 9*********************************998773322222222222222222221111........11112222222222221 PP

>> DUF3926  Protein of unknown function (DUF3926)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.0   6.9e-05      0.25      12      28 ..      19      35 ..      18      39 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.9e-05
     DUF3926 12 QQSAkkvLNILQEELSS 28
                QQ   k+ N LQE LSS
  KHJ32063.1 19 QQQQAKIFNFLQEKLSS 35
                666678**********9 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.6    0.0055        20       9      33 ..       1      25 [.       1      35 [. 0.54
   2 ?    7.3   0.3    0.0016       5.6       9      35 ..      53      77 ..      51      81 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0055
        XhlA  9 ietkldnleervdkleekaaeaeek 33
                ++t+l++le++  + e+++  + + 
  KHJ32063.1  1 MKTRLEKLEKKSRQAEKRQQQQAKI 25
                5677777777544555555555444 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0016
        XhlA  9 ietkldnleervdkleekaaeaeekik 35
                ietk++++e+     e+ka+  + k +
  KHJ32063.1 53 IETKVKDHEDS--SSERKATASLHKHE 77
                9*********6..78999998887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2024  (0.11289); expected 358.6 (0.02)
Passed bias filter:                      645  (0.0359752); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 844.42
//
Query:       KHJ32064.1  [L=376]
Description: putative s-adenosyl-l-methionine-dependent methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-13   51.2   0.0    2.2e-13   50.7   0.0    1.2  1  FtsJ             FtsJ-like methyltransferase
  ------ inclusion threshold ------
      0.016   14.9   0.2      0.043   13.5   0.0    1.7  2  Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
       0.15   11.4   0.0       0.25   10.7   0.0    1.3  1  DUF2184          Uncharacterized protein conserved in bacteri


Domain annotation for each model (and alignments):
>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.0   3.6e-17   2.2e-13      10     176 ..      99     300 ..      70     301 .. 0.70

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 3.6e-17
                 HHHHHHHT-S-TT....-E......EEECT-TTSHHHHHHCCT.............T.-SEEEEEESSSSHHH..TTEEEECS-CCCSSHHHHHCHCHH CS
        FtsJ  10 leidekfklfkpg....kt......vvDlgaaPGgwsqvllqrl............gakgkvvavDlqpmapl..pgvttiqgditdpetiekikeals 84 
                 ++i e+++l ++     ++      ++D++ aPGg++  +l+ l            +++g+ + vD+ +++++    +t++   + + ++ +       
  KHJ32064.1  99 IQIAEEMHLASNIfcaeRRenedikILDICMAPGGYTAAVLKSLpnakcfcltlppEEGGHDILVDVLKIKKIilIDITLLIKEFSNNKVPD------- 190
                 6777777733222333322455666*******************433333333333113444445555554444445555555554444433....... PP

                 H...............SSEEEEEE--S-SS-CH..HHHHHHHHCCCCHHHHCCHCCCCECCCEEEECCCHCCCHHHHHHH.HHCCEEEEEEEE-SS--C CS
        FtsJ  85 e...............rkvdlvvsDgapdvsgv..hdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkq.lkkfFekvsvvkPkssrs 165
                 +               +k+dlv +Dg    + +     +++ + +Lll++l la++ l+ ggt+v+ + + e+ +++l+    + F++++++kP  + +
  KHJ32064.1 191 NyplkskfsnrqpfkcHKFDLVFCDGMVLRTHIrpGWREQTEATRLLLSQLILAMQRLRSGGTLVILLHKVENWDSILTIrSFSRFSNIQLFKPVKKHN 289
                 13333345557888889********99433333222333333469*************************9999999999566**************** PP

                 CG-EEEEEEEE CS
        FtsJ 166 esseeflvcrg 176
                 + s  ++++++
  KHJ32064.1 290 TRSSFYMIAKD 300
                 *******9986 PP

>> Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   7.1e-06     0.043       8      34 ..     119     146 ..     113     153 .. 0.78
   2 ?   -3.0   0.0      0.82   4.9e+03     120     135 ..     241     255 ..     229     263 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 7.1e-06
                      TT-E.EEESS-TTSHHHHHHHHHTTTTS CS
  Methyltr_RsmB-F   8 eeet.ilDlcaaPGgKTthiaelmknkg 34 
                      +e+  ilD+c aPGg T+ +++ + n++
       KHJ32064.1 119 NEDIkILDICMAPGGYTAAVLKSLPNAK 146
                      34435*************9998777766 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.82
                      HHHHHCCCEEEEEEEE CS
  Methyltr_RsmB-F 120 llsaaidllkkgGvlv 135
                      l+  a++ l++gG+lv
       KHJ32064.1 241 LIL-AMQRLRSGGTLV 255
                      333.467889999998 PP

>> DUF2184  Uncharacterized protein conserved in bacteria (DUF2184)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   4.1e-05      0.25     109     148 ..      20      59 ..      17      90 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 4.1e-05
     DUF2184 109 adeiladinaaltavwtasgyveapdtlllppsqyadLat 148
                 ad+ l+d+n+  ++v+t s +  +++ lll  s+++ L+ 
  KHJ32064.1  20 ADKSLNDVNEKNSKVKTSSYREIIANFLLLKDSDFMRLSE 59 
                 7999********************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       439  (0.0244855); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2895.04
//
Query:       KHJ32065.1  [L=143]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       323  (0.0180155); expected 358.6 (0.02)
Passed bias filter:                      248  (0.0138323); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1042.03
//
Query:       KHJ32066.1  [L=127]
Description: hypothetical protein EV44_g3191 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 983.74
//
Query:       KHJ32067.1  [L=432]
Description: putative serine threonine-protein phosphatase 2a activator 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.8e-113  379.0   0.0   2.1e-113  378.7   0.0    1.1  1  PTPA             Phosphotyrosyl phosphate activator (PTPA) pr
     0.0088   15.2   0.0      0.013   14.6   0.0    1.2  1  AI-2E_transport  AI-2E family transporter


Domain annotation for each model (and alignments):
>> PTPA  Phosphotyrosyl phosphate activator (PTPA) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  378.7   0.0  2.4e-117  2.1e-113       1     300 [.      63     356 ..      63     357 .. 0.95

  Alignments for each domain:
  == domain 1  score: 378.7 bits;  conditional E-value: 2.4e-117
                 -B----SCHHHHHHCCCHHHHHHHHHHHHHHHHHT..........T-SS-HHHHHHHHHHHHHCCCTS---SS.--SSS-THHHHHHHHHHHHHHHHHH CS
        PTPA   1 pakrileeedlekfkkSkayadilefisrlneavkgkklee..eeeasesvekllklLdeleelideippeeq.psRfGnkafrtwhdrleeraeelle 96 
                 p+kril+++d++ f +S++y+ +l+f+ rl+e+v++++++   +++++ +++k++ +Ld++++li+++pp  q +sRfGn+ fr++++   ++ e++++
  KHJ32067.1  63 PSKRILSPNDHNLFLESSTYKLLLAFVFRLSESVVDTPVSAisHTDMNVTLQKIIVILDQIQDLIERAPPVYQgDSRFGNEGFRDFLNLCAKEHESWHQ 161
                 89*************************************654467778889*******************99846************************ PP

                 HHS-GGGGGG......HHHHHHHHHTTT-BTTTTEE-HHHHHHHHHHHHHHHHTT-STT....--HHHHHHHHHHHHHHHHHHHHHTT-EES------- CS
        PTPA  97 ellpeelkkaelekaaieelkaYlkesfGnatrlDYGtGhElsFlafllcLeklgllkeeeeedeealvlkvfekYlelvrrLqstYtLepAgshGvwG 195
                 +l  ++       +aai+e+++Y+++sfGn tr+DYG+GhEl+F+++llcL++lg++     +d +alvl+vf++Yl+l+r +qstY+LepAgshGvwG
  KHJ32067.1 162 QLGISS-------AAAIDEISTYILQSFGNYTRIDYGSGHELNFILWLLCLYQLGIIL---PTDFRALVLVVFTRYLRLMRLIQSTYYLEPAGSHGVWG 250
                 977655.......357*****************************************4...46************************************ PP

                 -SSS-SHHHHHHHHCSSS-G....GGGG-HHHHHHHTTT-HHHHHHHHHHHH--S-.HHHH-HHHHHHHCC--HHHHHHHHHHHHHHHTTT-HHHHTT- CS
        PTPA 196 LDDyqflpflfGsaQlvehkklkpksildaevveeyakeylYlsaiafinevKkgp.frehSpmLydisavktWekvnkGlikmYkaevLskfpvvqhf 293
                 LDDyqflpflfGs+Ql +h++++p si+++ v+eey+k+++Yl++++fin+vK+   +r+hSpmL+dis++k+W+kv+ G+ +m+ aevL+k+pv+qhf
  KHJ32067.1 251 LDDYQFLPFLFGSSQLLHHPFIRPLSIHQDLVLEEYSKDFIYLEQVSFINSVKNVEgLRWHSPMLDDISSAKSWAKVEAGMRRMFVAEVLKKLPVMQHF 349
                 *****************************************************9778****************************************** PP

                 -BBSSSB CS
        PTPA 294 lfGsllp 300
                 lfGsl+p
  KHJ32067.1 350 LFGSLIP 356
                 ****997 PP

>> AI-2E_transport  AI-2E family transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   1.5e-06     0.013      74     152 ..     118     201 ..     107     208 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.5e-06
  AI-2E_transport  74 lliaqltqlvkslpayidslqnilnelpslleele.n....liqalkqslskilsnilssilnsllsllasllglilslvlvll 152
                      ++++q+++l++  p ++++ +++ ne ++ +  l  +    ++q+l+ s ++ + +i  +il+s+ ++++   g   +l ++l 
       KHJ32067.1 118 VILDQIQDLIERAPPVYQGDSRFGNEGFRDFLNLCaKehesWHQQLGISSAAAIDEISTYILQSFGNYTRIDYGSGHELNFILW 201
                      479***************99999999888887776557778************************9998766666555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       311  (0.0173462); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 3236.34
//
Query:       KHJ32068.1  [L=162]
Description: putative diphthamide biosynthesis protein 4 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.9e-41  140.4   4.2    4.8e-41  140.1   4.2    1.1  1  Mitoc_mL59   Mitochondrial ribosomal protein mL59
  ------ inclusion threshold ------
        5.7    7.7  10.9         44    4.8  10.9    2.3  1  U1snRNP70_N  U1 small nuclear ribonucleoprotein of 70kDa MW N


Domain annotation for each model (and alignments):
>> Mitoc_mL59  Mitochondrial ribosomal protein mL59
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.1   4.2   5.4e-45   4.8e-41       2     129 .]      17     150 ..      16     150 .. 0.96

  Alignments for each domain:
  == domain 1  score: 140.1 bits;  conditional E-value: 5.4e-45
  Mitoc_mL59   2 alkrffareppsalsasaaka.......arlpnPflptknpktgrWapPkySlRrqaeLvKaAkksgveellPpgpKstkfkeeraverglrvkgtagk 93 
                 +l rffar+pp ++ + + ++        r  nPf++t+ p+t+rW++P +SlRrqa+LvK+A+++gve+llP + K tk+k +r++++g+r+kgt g 
  KHJ32068.1  17 KLSRFFARYPPLSIIPPNYRKdsspqpkYRFINPFKATRDPNTNRWHDPTFSLRRQADLVKLAREHGVEDLLPYTVKGTKAKIRRKMKHGSRIKGT-GA 114
                 799********999987777799999997788****************************************************************.** PP

  Mitoc_mL59  94 kkmfkGhkwERtkeerlekrrkaledmpkrirewke 129
                 ++ +kG++ ERt+++rle+r++a+  mp++i++wke
  KHJ32068.1 115 GQNVKGKESERTMKARLEMRKQAMLAMPQMIKTWKE 150
                 **********************************96 PP

>> U1snRNP70_N  U1 small nuclear ribonucleoprotein of 70kDa MW N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  10.9    0.0049        44       2      43 ..      13      52 ..      12     151 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0049
  U1snRNP70_N  2 kLPpnLlkLFaprpplpylppldydpekrktkkkitGvaafl 43
                  LPp+L++ Fa  ppl  +pp  y ++ + + +k+  +  f 
   KHJ32068.1 13 SLPPKLSRFFARYPPLSIIPPN-YRKDSSPQ-PKYRFINPFK 52
                 59******************97.66665544.5665555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1244.17
//
Query:       KHJ32069.1  [L=246]
Description: putative exosome complex subunit rrp46 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-10   41.3   0.0    3.4e-10   40.5   0.0    1.3  1  RNase_PH  3' exoribonuclease family, domain 1


Domain annotation for each model (and alignments):
>> RNase_PH  3' exoribonuclease family, domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.0   1.9e-14   3.4e-10      10     132 .]      13     140 ..       8     140 .. 0.87

  Alignments for each domain:
  == domain 1  score: 40.5 bits;  conditional E-value: 1.9e-14
                 SSSSTTSEEEEEEECCEEEEEEEEEEEEEE-TCCG--CCEEEECCCCECCCCEC-C...S...HHHHHHHHHHHHHHCCTC-CCGCCTCEEEEEEEEEE CS
    RNase_PH  10 gvlsqanGSaylelGdtkvlasvtgpieerpseerddaegaldveveyapfasgerrregrpsdeeielsrlleralrpsillekkpkstididitvls 108
                  +l++a+GSa  + +  +++ +v+gp e + +   d++++a +v+v++ p +       g ++ +e+ l+++l+++lr+ il+ ++p++ i++++++  
  KHJ32069.1  13 STLPRADGSATTTENGFTIIGAVNGPLEISRR---DENPEAAVVDVTIRPAV-------GSAGTRERHLESILQSTLRQIILIYEFPRTLIQVTLQIST 101
                 689************************99433...44456689999988877.......8899**********************************99 PP

                 CCC...............S-CHHHCHHHHHHHHHCTCEE CS
    RNase_PH 109 sdg...............gslldalinaaslALadagip 132
                 +                   +l al  +a++AL++a ip
  KHJ32069.1 102 TPEndddfkpkgaragsnLFILPALLQTATMALISASIP 140
                 96667788888899986666789999*********9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       355  (0.0198003); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1740.55
//
Query:       KHJ32070.1  [L=486]
Description: putative cytochrome p450 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-72  243.0   0.0    3.3e-71  240.4   0.0    1.8  1  p450      Cytochrome P450


Domain annotation for each model (and alignments):
>> p450  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.4   0.0   1.8e-75   3.3e-71      44     442 ..      32     456 ..      22     472 .. 0.91

  Alignments for each domain:
  == domain 1  score: 240.4 bits;  conditional E-value: 1.8e-75
                 EEEEEEESHHHHHHHHCTSTTTTCEESSHHHHHHHHHTTTTSSSTTCGHHHHHHHHHHHHHHHTSHSTTTHHHHHHHHHHHHHHHHHCCCCHCS..... CS
        p450  44 kpvvvlsgpeavkevlikkgeefsgrpdeallatsrkpfkgkgvlfangekwkklRrfltptltsfgklsleelveeeaedlveklrkkagess..... 137
                  +  ++++p+  +evl  k+ ef++   + l++    + +g g+l+a+g+++k +Rr l+p++ +  ++ l +++ e a ++ e++  ++++ +     
  KHJ32070.1  32 IERLFITSPNGLREVLSSKSYEFVKP--SQLVQ-GLSRLLGVGLLLAEGDEHKIQRRNLLPAFSYRHIKDLYPIFWEKAVEVTEAITFQVKAGGinfde 127
                 567899*************9888884..44444.45599***************************8889***************************** PP

                 ...................EEETHHHHHHHHHHHHHHHHHSSHHHTTTSSHHHHHHHHHHHHHH..HHHCHHHHCCCCCH..HHTCCSCHHHHHHHHHH CS
        p450 138 ...................elditellskaaldvigsilFgarfdlledeklselvkaveelss..llskssvqllllfp..llkylptkllrklkeav 213
                                    +++i+e+ s+a+ld+ig    g  f+++ed+++  l +  +++++          l+++fp  l+k +p k + ++++a+
  KHJ32070.1 128 lpeyqkevtretkiseteaVIEISEWASRATLDIIGIAGIGQDFKSIEDSNA-PLSQTYRTVFKpsRQGRYLALLNNFFPgwLVKRIPVKRNVEIESAT 225
                 **************************************************85.5666666666633444566778899999899*************** PP

                 HHHHHHHHHHHHHHHHCHCHCSCSSCSHHHHHHHHCTTCTCTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHCCTTT. CS
        p450 214 kklkdlldklieerretldsakksrrdfldalllakkekkgesklsdeelaatvlellfaGvdTtsstlswaLyeLaknPevqeklreEidevlgdkr. 311
                   + d+ +k i+ ++ +l++ k +++d l + l++         +s+e+l  +++++l+aG++Tts++lswa+y+L  nP+ q +lr Ei+  l++ + 
  KHJ32070.1 226 ALIRDTCRKRIQMKKIKLQEGKLNDYDILGVALKSG-------GFSEENLIDQMMTFLAAGHETTSNALSWAIYLLCVNPSCQTRLRAEIHANLPSPKs 317
                 *********************999999999999993.......7**************************************************65555 PP

                 ..T-HHHHCCT-HHHHHHHHHHHHHSCSSTTEEEEESSSCEEETTEEE-TT-EEEEEHHHHHT-TTTS.SSTTS--GGGGB-TTS......CTESSCTT CS
        p450 312 ..eptyddlqklpyldavikEtLRlhpvvplllpRevtkdvvirgylipkGtevivnlyalhrdpevf.pnPeeFdpeRFldekg......nskrksfa 401
                   +++ + ++ l yl+av+ E+LR++p v   ++R++ +d++i g++ipkGt+vi+ ++a+++++e++ p++++F+peR+l+ +           ++++
  KHJ32070.1 318 qtSISSSSIEGLSYLNAVCSEVLRYYPSVA-ITMRVAIHDTSILGHKIPKGTRVIIVPWATNKSEELWgPDAKKFKPERWLPSDTnphpanGGAASNYS 415
                 79****************************.788*************************************************99999998445799** PP

                 --TTEEGGGS-TTHHHHHHHHHHHHHHHHHHEEEEESTSTS CS
        p450 402 flPFGaGpRnCiGerlArmelklflatlLqnFevelqpetd 442
                 fl F  GpR CiG+++Ar e   +la+++ +Fe++l+++++
  KHJ32070.1 416 FLTFLHGPRGCIGQGFARAEFACLLASIIGRFEFSLNDQRE 456
                 ***********************************965443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3456.33
//
Query:       KHJ32071.1  [L=452]
Description: putative dna helicase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-57  193.3   0.3    8.3e-57  192.0   0.0    1.7  2  AAA_12           AAA domain
    5.8e-46  157.4   0.8    1.1e-45  156.4   0.8    1.5  1  AAA_11           AAA domain
    0.00037   20.1   1.6    0.00086   18.9   1.6    1.6  1  4HB_MCP_1        Four helix bundle sensory module for signal 
    0.00048   19.9   0.0       0.31   10.7   0.0    2.4  2  Viral_helicase1  Viral (Superfamily 1) RNA helicase
  ------ inclusion threshold ------
      0.021   14.2   2.9        6.1    6.1   0.1    3.1  3  UvrD_C           UvrD-like helicase C-terminal domain
      0.093   12.4   0.0       0.24   11.1   0.0    1.6  1  AAA_30           AAA domain
       0.46   10.8   5.3        1.1    9.5   5.3    1.6  1  Ribosomal_L30_N  Ribosomal L30 N-terminal domain


Domain annotation for each model (and alignments):
>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.66   1.7e+03      67     112 ..      61     105 ..      46     115 .. 0.68
   2 !  192.0   0.0   3.3e-60   8.3e-57       1     198 [.     201     421 ..     201     422 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.66
      AAA_12  67 lvfidvekseeekekkeksyiNeeEaelvvklvekllkkgseeerk 112
                  ++ d++k+ ++k+++  +    +E + +   +++l k+++++ +k
  KHJ32071.1  61 AIVKDIQKEMDSKQTSIRKTKSGKERKQIYADLKELRKEYKNR-EK 105
                 5555666666666666677777778888888888887777776.33 PP

  == domain 2  score: 192.0 bits;  conditional E-value: 3.3e-60
      AAA_12   1 lerSlferllkke.kekvvlLdtqYRmhpeIsrfpsklfYkgkLkdaesvkkrele....aqealeepleplvfidv.....................e 73 
                 ler+lf rll+ + ++ + +L+tqYRm+++I+rfps+++Y++kL +ae vk+  l+    + +++e++ epl+f+d+                     +
  KHJ32071.1 201 LERTLFSRLLELHgPKIKCMLTTQYRMNEKIMRFPSDELYESKLIAAEAVKNCLLKdlpyEVQETEDTIEPLIFFDTqggdfperneeeiliaveeknS 299
                 589**********99*********************************999988888888899999***********9999999999999999877542 PP

      AAA_12  74 kseeekekke........ksyiNeeEaelvvklvekllkkgseeerkkigvitpYraqvellkkklkekeeeksekeievntvdgfQGrekdviilslV 164
                   +++    +        +s++Ne+Ea+l   +v+kl+++g+++  ++i+vitpY+aq++ll++ +k+ ++      ie+++vdgfQGrek+++i+slV
  KHJ32071.1 300 -GNKNM---SkksggiigESKSNEMEAALAKFHVQKLVDAGVKT--EDIAVITPYNAQLTLLNQSMKDLFPG-----IEMGSVDGFQGREKEAVIISLV 387
                 .22222...123478999*************************9..9********************87777.....9********************* PP

      AAA_12 165 RsnekkeigflkderrlNValTRAkskliivGnk 198
                 Rsn+k+e+gfl d+rr+NVa+TR k+ l ++G++
  KHJ32071.1 388 RSNSKREVGFLGDKRRINVAMTRPKRLLTVIGDS 421
                 ********************************97 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.4   0.8   4.4e-49   1.1e-45      52     260 ..       3     176 ..       1     177 [. 0.96

  Alignments for each domain:
  == domain 1  score: 156.4 bits;  conditional E-value: 4.4e-49
      AAA_11  52 sakpriLvCapSNaAvDellerllrglldsegekykpkivRvgneeeriseavksvsleekvekrlekeekaqlakeiskeleklakelrafeeeeeke 150
                 ++++r+LvC+pSN +vD+++erl+          +k+ ivR+g+++ r  ++v s sl+  ++++ ++    +++k+i+ke +++++++          
  KHJ32071.1   3 KRQKRVLVCGPSNISVDNIVERLVP---------SKIPIVRLGHPA-RLLPSVLSTSLDVLLQSSNAA----AIVKDIQKEMDSKQTSI---------- 77 
                 589**********************.........99**********.9*********99999999866....7**********999999.......... PP

      AAA_11 151 klkkskekskskleqerrklkkerkelskeleeaeesleeevldeaeivltTlsgagsklleklakkfdvviIDEAaqavEpstliPlrlgakkvvLvG 249
                         +k k  +er+++ +  kel+ke++++e+++ +++l ++++vl+Tl+gag+ ++++    fd+viIDEA+qa+E+++++Pl+++ +kv+L+G
  KHJ32071.1  78 --------RKTKSGKERKQIYADLKELRKEYKNREKNVVTSLLGNCKVVLATLHGAGAFNMRSE--VFDAVIIDEASQALEAQCWVPLLSA-QKVILAG 165
                 ........788899999********************************************999..8***********************9.******* PP

      AAA_11 250 DpkQLpatvis 260
                 D+ QLp+tv+s
  KHJ32071.1 166 DHLQLPPTVKS 176
                 *********98 PP

>> 4HB_MCP_1  Four helix bundle sensory module for signal transduction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   1.6   3.4e-07   0.00086      82     131 ..      61     110 ..      53     116 .. 0.89

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 3.4e-07
   4HB_MCP_1  82 kdieeleaeidkllekyektilteeEkelleefkeqlnaYrevrkkvlel 131
                 + ++++++e+d++  +++kt+  +e k++++++ke  ++Y++ +k+v++ 
  KHJ32071.1  61 AIVKDIQKEMDSKQTSIRKTKSGKERKQIYADLKELRKEYKNREKNVVTS 110
                 44599****************************************99875 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00012      0.31      55     104 ..     130     174 ..      95     192 .. 0.80
   2 !    6.8   0.0    0.0019       4.9     166     233 ..     341     418 ..     292     419 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00012
  Viral_helicase1  55 malvkstkgkililDEylllhaGyilllaalskaklvilfGDplQipfhs 104
                      m       ++ +i+DE+ ++  ++ ++   l +a+ vil GD+lQ p   
       KHJ32071.1 130 MRSE---VFDAVIIDEASQALEAQCWV--PLLSAQKVILAGDHLQLPPTV 174
                      4432...4899******9998777776..8899999*********98764 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0019
  Viral_helicase1 166 vlvyltftqalkealgvr........evttvhevqGltfdkVtlvllketdlelis..esrenllvAlTRhrkslvil 233
                      +++++t  +a ++ l+++        e+  v + qG + + V++ l +++++ ++    ++    vA+TR ++ l+++
       KHJ32071.1 341 DIAVITPYNAQLTLLNQSmkdlfpgiEMGSVDGFQGREKEAVIISLVRSNSKREVGflGDKRRINVAMTRPKRLLTVI 418
                      334444444444433333555666666899************987777777665557788999*******99998875 PP

>> UvrD_C  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.09   2.3e+02      32      75 ..      63     105 ..      40     131 .. 0.58
   2 ?    6.1   0.1    0.0024       6.1      43      95 ..     310     362 ..     282     379 .. 0.77
   3 ?    6.0   0.0    0.0026       6.8     327     346 ..     400     419 ..     363     422 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.09
                 xxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C  32 kek.ktvekgekivvleaeteeeEaekiaatikalleknekledi 75 
                  ++ +++ ++++  ++++++  +E ++i+a +k+l  k+ k+ + 
  KHJ32071.1  63 VKDiQKEMDSKQTSIRKTKS-GKERKQIYADLKELR-KEYKNREK 105
                 22235555555555555544.345566666666666.33333332 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0024
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C  43 ivvleaeteeeEaekiaatikallekneklediavLvRsnkdadkiskaLkke 95 
                  ++ e++++e Ea      +++l++   k+ediav++  n++  ++++++k +
  KHJ32071.1 310 GIIGESKSNEMEAALAKFHVQKLVDAGVKTEDIAVITPYNAQLTLLNQSMKDL 362
                 367889999999999999****************************9999875 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0026
                 xxxxxxxxxxxxxxxxxxxx RF
      UvrD_C 327 EkRlfYVaiTRAkkrLfisy 346
                 +kR   Va+TR+k+ L+++ 
  KHJ32071.1 400 DKRRINVAMTRPKRLLTVIG 419
                 799999***********985 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   9.3e-05      0.24      84     130 ..     128     172 ..      87     177 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 9.3e-05
      AAA_30  84 arlepg..tllivDEagmvdtkqlaallkaaekagakvilvGDerQlas 130
                  +++++  + +i+DEa+ +  +q    l +a+    kvil+GD+ Ql++
  KHJ32071.1 128 FNMRSEvfDAVIIDEASQALEAQCWVPLLSAQ----KVILAGDHLQLPP 172
                 3444444699*******997777665555565....5**********97 PP

>> Ribosomal_L30_N  Ribosomal L30 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   5.3   0.00043       1.1      15      56 ..      67     108 ..      63     110 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00043
  Ribosomal_L30_N  15 lkakrakkaaakkkankkkrklifkRaekYvkEYrqkereei 56 
                      +k+   k++  +k++  k+rk+i+  +++  kEY+++e++++
       KHJ32071.1  67 QKEMDSKQTSIRKTKSGKERKQIYADLKELRKEYKNREKNVV 108
                      67778899999****************************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1004  (0.0559987); expected 358.6 (0.02)
Passed bias filter:                      615  (0.034302); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.39
# Mc/sec: 3445.01
//
Query:       KHJ32072.1  [L=807]
Description: putative pre-mrna-splicing atp-dependent rna helicase prp28 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-45  154.2   0.0    9.2e-45  152.5   0.0    1.8  2  DEAD        DEAD/DEAH box helicase
    6.3e-29  100.6   0.0    3.4e-28   98.2   0.1    2.2  2  Helicase_C  Helicase conserved C-terminal domain
     0.0023   18.4   3.1     0.0023   18.4   3.1    2.9  2  DUF2986     Protein of unknown function (DUF2986)
  ------ inclusion threshold ------
      0.049   13.4   0.0      0.093   12.5   0.0    1.4  1  PRAI        N-(5'phosphoribosyl)anthranilate (PRA) isomerase
      0.084   13.3   0.1       0.18   12.2   0.1    1.5  1  DUF108      Domain of unknown function DUF108


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.5   0.0   2.6e-48   9.2e-45       2     175 ..     388     585 ..     387     586 .. 0.95
   2 ?   -1.9   0.0       0.7   2.5e+03      46      72 ..     635     661 ..     600     695 .. 0.50

  Alignments for each domain:
  == domain 1  score: 152.5 bits;  conditional E-value: 2.6e-48
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS......TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet......kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskl 94 
                 ++Q++aip++l+ +d+++ a TGsGKT+afl+p+l  ++e       ++++gp a+i++PtreLa+q+  +++kf  +++ ++++i+gg++ ++q  +l
  KHJ32072.1 388 AVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELpplndvTKNDGPYAIILAPTRELAQQIEVEARKFATPLGFTCVSIVGGHSLEEQSYNL 486
                 69*********************************999988****9999************************************************** PP

                 HTTCSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTT...................SEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...................xxxxxxxxxxxxxxx RF
        DEAD  95 dngvdivvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklq...................rqvivlSATlpkdvk 174
                 +ng++i+++tpgrl+d ++++ l l q+ ++++DEadr+ d gf++ +n+il +lp  +++   +                   rq+++ +AT+p  v+
  KHJ32072.1 487 RNGAEIIIATPGRLVDCIERRMLVLGQCCYVIMDEADRMIDLGFEESVNKILDALPVGNEKPD-SddaedaqamsrhlggkdryRQTMMYTATMPLAVE 584
                 *******************************************************75544433.358****************999*********8887 PP

                 H CS
                 x RF
        DEAD 175 k 175
                 k
  KHJ32072.1 585 K 585
                 7 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.7
                 TS-EEEEEESSHHHHHHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  46 tgpkalivePtreLaeqtlnnlkkfkk 72 
                  +p +++ +  +  +  +++++k+++ 
  KHJ32072.1 635 YQPPIIVFVNIKRNCDAVARDIKQMGF 661
                 333344444444444444444444444 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.1     4e+03      13      59 ..     436     486 ..     427     496 .. 0.69
   2 !   98.2   0.1   9.6e-32   3.4e-28       4     111 .]     624     731 ..     621     731 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.1
                 TTTTSEEEEEESSHHHHHH....HHHHHHHTTSTEEEESTTSTHHHHHHHH CS
  Helicase_C  13 eeeggkilifvntidrlek....vklllekkgikvavlhgelpqnereeil 59 
                 +++g  ++i ++t++ +++    ++ + +  g++++ + g  + +e+   l
  KHJ32072.1 436 KNDGPYAIILAPTRELAQQieveARKFATPLGFTCVSIVGGHSLEEQSYNL 486
                 566777899999999665533344555444499999998888777776555 PP

  == domain 2  score: 98.2 bits;  conditional E-value: 9.6e-32
                 HHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHH CS
  Helicase_C   4 eallellkleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyi 101
                 ++l e+l + e +  i++fvn +++++  ++ + ++ g+++++lhg+ +q++re++l++ ++g ++vL+atd a+rGid+p+v+lV+nf++ +n++sy 
  KHJ32072.1 624 KRLNEILASGEYQPPIIVFVNIKRNCDAvARDI-KQMGFSSVTLHGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYT 721
                 56677788889999************9776666.4559************************************************************* PP

                 HHHTTSSSTT CS
  Helicase_C 102 qriGRtgRag 111
                 +riGRtgRag
  KHJ32072.1 722 HRIGRTGRAG 731
                 ********97 PP

>> DUF2986  Protein of unknown function (DUF2986)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   3.1   6.3e-07    0.0023      16      42 ..      75     101 ..      70     102 .. 0.78
   2 ?   -1.2   0.4      0.88   3.1e+03       3      12 ..     622     631 ..     621     632 .. 0.89

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 6.3e-07
     DUF2986  16 KkanaKlhpsnKpkYISKAeRakleae 42 
                 Kk++   + ++Kpk+ SKAeR+kl++e
  KHJ32072.1  75 KKKRENDEAAAKPKFLSKAEREKLALE 101
                 44444456678*************987 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.88
     DUF2986   3 RKKKinqklk 12 
                 RKK++n++l+
  KHJ32072.1 622 RKKRLNEILA 631
                 9*****9997 PP

>> PRAI  N-(5'phosphoribosyl)anthranilate (PRA) isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.6e-05     0.093      14      94 ..     604     682 ..     594     699 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.6e-05
                 HHHHHTSSEEEEE--TTBTTB--HHHHHHHCCCS--EEEEEESSS-HHHHHHHHHHCTECEEEE-CGG.-HHHHHHHHHHS CS
        PRAI  14 aavkagadelglifaesskrevseeqaqellekvpaklVGVfvNqpieevlriaqelgldvvQLHGdedeqeyeellktel 94 
                 +av+   +++++i  e  kr+   +++ +  e+ p+ +V V    + + v r ++++g   v LHG+  +qe++e++ +++
  KHJ32072.1 604 EAVDTVEQRVEFISGED-KRKKRLNEILASGEYQPPIIVFVNIKRNCDAVARDIKQMGFSSVTLHGSK-TQEQREAALASV 682
                 56666666777777777.777777777777777777677777778899********************.666666555444 PP

>> DUF108  Domain of unknown function DUF108
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   5.1e-05      0.18      23      69 ..     687     737 ..     685     744 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.1e-05
                 -CHHHHHHHHHH.CCGEEEEEEEETT-SSEE....EEEEEEETTEEEEEEE CS
      DUF108  23 vNvaaalaLaalgfdrvkvelvadpnldkni....heieveGsfgefslev 69 
                 +Nv +a+ La++g+d  +v lv++ n+  ni    h+i  +G++g+  + +
  KHJ32072.1 687 TNVLVATDLAGRGIDVPDVSLVVNFNMATNIesytHRIGRTGRAGKSGVAI 737
                 7*********************99877666422228888888888876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (807 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1219  (0.0679904); expected 358.6 (0.02)
Passed bias filter:                      609  (0.0339673); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.76u 0.29s 00:00:01.05 Elapsed: 00:00:00.45
# Mc/sec: 5381.65
//
Query:       KHJ32073.1  [L=421]
Description: putative sun domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-87  291.8  13.9    5.6e-87  291.3  13.9    1.2  1  SUN       Beta-glucosidase (SUN family)


Domain annotation for each model (and alignments):
>> SUN  Beta-glucosidase (SUN family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  291.3  13.9   3.1e-91   5.6e-87       2     245 .]     151     410 ..     150     410 .. 0.95

  Alignments for each domain:
  == domain 1  score: 291.3 bits;  conditional E-value: 3.1e-91
         SUN   2 gkikCsefpsdeglvavdalglgGwagiqd.................vkgesqeCkegsyCsyaCppGylktqwpsaqgatgssvGGLyCnkdGklekt 83 
                 g+i+Csefps +g+va d+ glgGw+g+q+                 v+  ++ C++gs+Csy+Cp+Gy+k+qwp+aqg++g+s+GGLyCn++Gkle++
  KHJ32073.1 151 GTIDCSEFPSAYGAVAADWVGLGGWTGVQKtpgyslssksisyiqtaVA--GEGCTPGSFCSYSCPAGYQKSQWPAAQGTSGQSIGGLYCNSNGKLELS 247
                 899****************************************874444..566********************************************* PP

         SUN  84 nkdskklCekgagkvkvknklsksvavCrTdyPGtEamlipteveagssaelavpdedtyy.kwkgkktsaqYYvNkaGvsvedaCvWgseskpvGNwa 181
                 ++++k++C++g+g++++kn  +k+vavCrTdyPGtEa+++++++ +gs++++++pd++ yy +w+g+ tsaqYY+N++G++ve+aC Wg+ +++ GNwa
  KHJ32073.1 248 RSSYKQICTPGVGNIQIKNLHDKNVAVCRTDYPGTEAETVALNALPGSTVRVTCPDAKDYYrTWEGSPTSAQYYINPSGFDVEEACNWGTPGSNSGNWA 346
                 ********************************************************9988847************************************ PP

         SUN 182 plvlGagkdedgktylsifqN.pts.keklnfnvkieaeegdsvsgkCkyesgklskggg..adgCtv 245
                 p+++G+gk+++g+t++s+f+N pt+ +  l++n+ i   +gd v+g+C+y++gk++k+g    +gCtv
  KHJ32073.1 347 PVNMGVGKADSGTTFVSLFPNvPTNtNGVLDYNIDI---TGD-VTGQCSYKNGKYYKDGVlsPTGCTV 410
                 *********************98653789*******...777.999**********99545599**98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       703  (0.0392102); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3214.63
//
Query:       KHJ32074.1  [L=568]
Description: putative nad+ kinase utr1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.4e-79  265.0   0.0    1.1e-78  264.4   0.0    1.3  1  NAD_kinase     ATP-NAD kinase
  ------ inclusion threshold ------
       0.14   11.4   0.0       0.38   10.0   0.0    1.6  2  tRNA-synt_His  Histidyl-tRNA synthetase


Domain annotation for each model (and alignments):
>> NAD_kinase  ATP-NAD kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  264.4   0.0   1.2e-82   1.1e-78       1     290 [.     214     507 ..     214     509 .. 0.93

  Alignments for each domain:
  == domain 1  score: 264.4 bits;  conditional E-value: 1.2e-82
                 .EEEEESSCGGTCSHHHHHHHHHHHCT-......EEEEECCGGCCSSSTT--HHHHTTTT--...........EEECCC-TTTTTSSSEEEEEE-HHHH CS
  NAD_kinase   1 kvgivvnpikkeaieraeevarwLldals....rvlevtveeklgeslaeaaefrsevisvlkkvkttd....dtrkaleafadagvdliivvGGDGTa 91 
                 +v+iv++ +++e++++++e+a wL+++ +     ++ v+v+ kl++s+ + a++  e ++ l      +    +++ ++++  ++ +dl+i++GGDGT+
  KHJ32074.1 214 NVMIVTKARDNELVTLTKELALWLMKTPRygsdLGVNVYVDAKLERSKRFGAAEILESDTRL------KpllrYWKPEICRNRPEIFDLVITLGGDGTV 306
                 69*************************55787778888888888888666555555555444......23344************************** PP

                 HHHHHHHHHCT-EEEEEESSS--SS-SEEGGGHHHHHHHHHH.T-SEEEEEEEEEEEEEETTE......EEEEEEESSEEEEEESSSSS-EEEEEEETT CS
  NAD_kinase  92 ldvarllqkaeiPvlgvnaGvkgfltefepeaaaelleklle.geirvekrevldavimrskgeediadiviensvlnevviirgpgstlielelyvdt 189
                 l+ ++l+q++++P+l++++G++gflt+fe+++++++l+k+++ +++rv+ r+++++++ +++ +++ ++ +  + vlnevvi+rgp + +++lely ++
  KHJ32074.1 307 LFTSWLFQRVVPPILSFSLGSLGFLTNFEFDKFQSQLNKVMDeEGMRVSMRMRFTCTVHKADTAIENKEPE-SYEVLNEVVIDRGPSPYVSNLELYGED 404
                 ******************************************999******************98777777.6779*********************** PP

                 EEEEEEEESEEEEE-TGGGGTHHHHTT--EE-TT---EEEEEESESSS----EEE-TT-EEEEEE-..SS--EEEEETTTEEEEE-TT-EEEEEEESSE CS
  NAD_kinase 190 elleadqldglivstPtGstayslsaGgplisPgvlailivpicPhslssrpiVvssssklrirva..srseallaldGseelelspgdevrvtasdkk 286
                 ell+++q+dg i +tPtGstayslsaGg+l++P+++ il++picPh+ls+rp+++s+   lr+ ++  sr++a +a+dG+ ++el +gd +++ as+++
  KHJ32074.1 405 ELLTVVQADGCIFATPTGSTAYSLSAGGSLVHPDIPGILLTPICPHTLSFRPLILSDTLLLRVAIPpnSRATAYCAFDGKARVELRQGDSITIAASQYP 503
                 *****************************************************************99******************************** PP

                 EEEE CS
  NAD_kinase 287 fkli 290
                 f ++
  KHJ32074.1 504 FPTV 507
                 9887 PP

>> tRNA-synt_His  Histidyl-tRNA synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   4.2e-05      0.38      23      84 ..     307     373 ..     304     384 .. 0.79
   2 ?   -4.0   0.0      0.74   6.6e+03     157     188 ..     460     491 ..     455     496 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 4.2e-05
                    HHHHTT-EEEE--SEEEHHH...HCTTSTCCHH..HS-EEE-TTSSEEEE-SSSHHHHHHHHHHHHH CS
  tRNA-synt_His  23 lfeswGYelVspPllEylds...lltgagedld..qtfklvDqsgrllglRaDiTpqvaRiaahrln 84 
                    lf sw +++V pP+l ++     +lt+ + d    q+ k++D++g  +++R  +T  v ++++   n
     KHJ32074.1 307 LFTSWLFQRVVPPILSFSLGslgFLTNFEFDKFqsQLNKVMDEEGMRVSMRMRFTCTVHKADTAIEN 373
                    7999*************8541114555555532359************************9998766 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 0.74
                    HHHHHHHTT--HHHHHHHHHHHHCT-HHHHHH CS
  tRNA-synt_His 157 vralleaaglsesleeallaalarkdlaelke 188
                     ++ll +++++++ +++ + a++ k+++el++
     KHJ32074.1 460 SDTLLLRVAIPPNSRATAYCAFDGKARVELRQ 491
                    57788899999999*********999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       469  (0.0261587); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 4381.92
//
Query:       KHJ32075.1  [L=210]
Description: hypothetical protein EV44_g3215 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       724  (0.0403815); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1561.09
//
Query:       KHJ32076.1  [L=190]
Description: putative n-acetyltransferase 5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.4e-05   23.7   0.0    6.3e-05   23.2   0.0    1.3  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    7.3e-05   22.7   0.0    0.00012   22.1   0.0    1.3  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
      0.002   18.0   0.0     0.0041   17.0   0.0    1.5  1  FR47             FR47-like protein
  ------ inclusion threshold ------
      0.012   16.0   0.0      0.019   15.4   0.0    1.4  1  Acetyltransf_7   Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   1.4e-08   6.3e-05      24     117 .]      31     135 ..       7     135 .. 0.79

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 1.4e-08
                     HHHHHHSTTCEEEE..EEETTEEEEEEEEEEEET..........TSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTEH CS
  Acetyltransf_1  24 feesfsleaegllv..aeedgeliGfisllkipd..........ekggvayieslaVspeyrgkGlGsaLlealeerareegikkivlaveednd 106
                     f+ s   + ++l+    + d+++ ++i+++              + + +a+i  l V+p  r+ Gl+++L   le       +  + l v+++n 
      KHJ32076.1  31 FYFSYLAHWPHLFTvaTSPDETISAYIMGKLESSpvyainsphyL-PFHAHITALTVAPHSRRLGLARTLSSSLESAGDTYDAWFVDLFVRKSNI 124
                     4444445555555545778899*****999999999999998852.6999999*********************99666668877899******* PP

                     HHHHHHHH.TTE CS
  Acetyltransf_1 107 aairlYek.lGF 117
                      a+ lY + lG+
      KHJ32076.1 125 IAQTLY-RgLGY 135
                     ******.88998 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   2.6e-08   0.00012      52     108 ..      79     137 ..      59     150 .. 0.90

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 2.6e-08
  Acetyltransf_10  52 shisllfVdpeyrgqGigkaLleaveeeaekdgikl.eltvnasp.yavpfYeklGFka 108
                       hi+ l V+p+ r+ G+++ L   +e++ ++ +    +l v++s+  a+ +Y+ lG+  
       KHJ32076.1  79 AHITALTVAPHSRRLGLARTLSSSLESAGDTYDAWFvDLFVRKSNiIAQTLYRGLGYSI 137
                      5***************************988888889*******************975 PP

>> FR47  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   9.2e-07    0.0041      22      80 ..      79     138 ..      65     145 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 9.2e-07
                 SSEEEEEE-GGG-SSSHHHHHHHHHHHHHHH.S-S-EEEEEETT-HHHHHHHHHHT-EEE CS
        FR47  22 gelgalqvlpehrrrGlgsrlvkalakeiae.rgktvllvvvasNtpsirlyeklGfeki 80 
                   + al v p  rr Gl++ l ++l  +  +     v l v+ sN  ++ ly  lG+   
  KHJ32076.1  79 AHITALTVAPHSRRLGLARTLSSSLESAGDTyDAWFVDLFVRKSNIIAQTLYRGLGYSIF 138
                 6799******************999988877556667799****************9765 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.0   4.3e-06     0.019      24      75 ..      71     136 ..      39     137 .. 0.66

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4.3e-06
                     S.......TCTEEEEE-GGGTTSSHHHHHHH.HTT.SE..EEEEEEEE....THH.HHHHHHHHTTEE CS
  Acetyltransf_7  24 d.......aeitrlaVdpeyrgkGiGraLle.aae.kg..iileqlel....nae.kaikfYeklGFe 75 
                     +       a+it l V+p+ r+ G++r L   + e  g  +  + + l    + +  a+ +Y+ lG+ 
      KHJ32076.1  71 SphylpfhAHITALTVAPHSRRLGLARTLSSsL-EsAGdtYDAWFVDLfvrkS-NiIAQTLYRGLGYS 136
                     1444566578888****************8732.2233222212222232323.259999******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       325  (0.0181271); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1363.56
//
Query:       KHJ32077.1  [L=610]
Description: putative dihydroxy-acid dehydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     2e-209  696.5   0.5   2.7e-209  696.1   0.5    1.2  1  ILVD_EDD  Dehydratase family


Domain annotation for each model (and alignments):
>> ILVD_EDD  Dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  696.1   0.5  1.5e-213  2.7e-209       1     517 []      77     602 ..      77     602 .. 0.97

  Alignments for each domain:
  == domain 1  score: 696.1 bits;  conditional E-value: 1.5e-213
    ILVD_EDD   1 kpiigiansyselvpchvhlkelaeavkegveeaggvpaefntigvsDgiamgeegmrysLpsReliadsvetmleaqllDalvlisgCDKivPgllma 99 
                 k+++gi +++ + +pc++hl +l ++vk+gve+ag ++++fntigvsDgi+mg++gmrysL+sR+liads+et++e+q++Da++ i+gCDK++Pg++ma
  KHJ32077.1  77 KAQVGISSVWYSGNPCNMHLLDLSNKVKKGVESAGLIGYQFNTIGVSDGISMGTKGMRYSLQSRDLIADSIETVMEGQWYDANISIPGCDKNMPGVIMA 175
                 789************************************************************************************************ PP

    ILVD_EDD 100 aarlniPaifvsgGpmeagkkk.....kldlssvfeavgalaagkiseeeleeleeaacpgaGsCsgmgTAntmaclaealGlslpgsasipatsaerk 193
                 + r+n+P+++v+gG++++g +      ++d++s+f+++g++ +g+i+ee  +++ ++acpg G+C+gm+TAntma+++e++G++lpgs+s pa s+++ 
  KHJ32077.1 176 MGRVNRPSLMVYGGSIKPGCSVtqnnsDIDIVSAFQSYGQYITGQITEEVRSDIIHHACPGEGACGGMYTANTMATAIEVMGMTLPGSSSNPAASEAKY 274
                 ******************65223456799********************************************************************** PP

    ILVD_EDD 194 elaeeagkrivelvekdlkprdiltkeafeNAivvllalGGStNavlHllAiAreagveltlddfdelsrkvpllaklkPsgkydmedlhraGGvpavl 292
                  ++ +ag +i +l+ kd+ prdi+t++afeNA+v++ ++GGStNavlHl+AiA ++gv+lt+ddf+++s+++p+la++kPsgk+ m+dlh++GG+p+++
  KHJ32077.1 275 IECLAAGPAIKNLLVKDICPRDIMTRAAFENAMVLVNITGGSTNAVLHLIAIADSVGVKLTIDDFQAVSDRTPFLADIKPSGKFVMHDLHKIGGTPSLI 373
                 **************99*********************************************************************************** PP

    ILVD_EDD 293 keLlkagllhgdvltvtgktlaenlee..aevkeqdvirplekplskegglavLkGnLapeGavvKtsaveeellkfegpArvfdseeeaveailkgki 389
                 k Llk+g+++g+ +tvtgktlaen+++  +  ++q++irp+++p++k+g++++L+G+Lap+G+v K++++e   l+f g+A++fd e+++++a+++gki
  KHJ32077.1 374 KLLLKEGIIDGSGITVTGKTLAENVQNvpDFPSDQTIIRPFSNPIKKTGHIQILRGSLAPGGSVGKITGKE--GLRFVGKAKCFDAEDDFITALEDGKI 470
                 *************************88655559*************************************9..9************************* PP

    ILVD_EDD 390 kagd..vvviryeGPkGgpGmpEmlkptsallgkglgkkvalitDGRfSGaskglvighvsPEAaegGpialvedGDiieidiekrtlelevs..eeel 484
                 k+g+  vvviryeGPkGgpGmpEmlkp+sa++g+glg++valitDGRfSG+s+g++igh++PEA+egGp++lv+dGD+i id+e+r l+le++  e+el
  KHJ32077.1 471 KKGEktVVVIRYEGPKGGPGMPEMLKPSSAIMGAGLGNDVALITDGRFSGGSHGFLIGHIVPEAQEGGPLGLVRDGDTIVIDAETRVLDLEIQggEKEL 569
                 ***999***********************************************************************************9999889*** PP

    ILVD_EDD 485 aaRraawkpekkvktrgllakyaklvssaseGA 517
                 ++Rr+++ p++ ++ +g+lakya+ vs+as+G+
  KHJ32077.1 570 EKRRKEFVPKPPKYIKGTLAKYARVVSNASRGC 602
                 ********9655556*****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (610 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 4288.91
//
Query:       KHJ32078.1  [L=526]
Description: putative sterigmatocystin 8-o-methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-24   85.3   0.0    5.4e-24   84.7   0.0    1.2  1  Methyltransf_2   O-methyltransferase domain
    5.6e-07   30.2   0.0    2.3e-06   28.2   0.0    2.1  2  Methyltransf_12  Methyltransferase domain
    2.8e-06   28.0   0.0    5.3e-06   27.1   0.0    1.5  1  Methyltransf_25  Methyltransferase domain
    2.2e-05   25.0   0.0    4.5e-05   24.0   0.0    1.6  1  Methyltransf_11  Methyltransferase domain
    8.5e-05   22.2   0.0    0.00015   21.4   0.0    1.3  1  Methyltransf_PK  AdoMet dependent proline di-methyltransferas
    0.00077   18.9   0.0     0.0014   18.0   0.0    1.3  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
     0.0016   18.0   0.0     0.0029   17.1   0.0    1.3  1  CheR             CheR methyltransferase, SAM binding domain
     0.0022   17.8   0.0     0.0044   16.8   0.0    1.4  1  Methyltransf_31  Methyltransferase domain
  ------ inclusion threshold ------
      0.016   15.0   0.0      0.032   14.1   0.0    1.5  1  Methyltransf_23  Methyltransferase domain
      0.022   14.3   0.0      0.044   13.3   0.0    1.4  1  MTS              Methyltransferase small domain
      0.082   12.7   0.0       0.17   11.7   0.0    1.4  1  DUF938           Protein of unknown function (DUF938)
      0.098   11.7   0.0        0.2   10.7   0.0    1.5  1  DREV             DREV methyltransferase
       0.14   12.8   0.1       0.34   11.5   0.1    1.6  1  Bin3             Bicoid-interacting protein 3 (Bin3)


Domain annotation for each model (and alignments):
>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.7   0.0   3.9e-27   5.4e-24       8     208 ..     277     496 ..     272     498 .. 0.88

  Alignments for each domain:
  == domain 1  score: 84.7 bits;  conditional E-value: 3.9e-27
                     HHHTS--..HHHHHS--.HHHHHTSSHHHHHHHHHHHH...TTHHHHHHHHHHSS-GGG-....SEEEEET-TTSHHHHHHHHH-TT-EEEEEE- CS
  Methyltransf_2   8 vregrnqiifkkafGis.lfeaikrdeeerakfnkglq...essslvakkvleafdlegl....kslvDvGGGtGalakaivsayPtikvivfDl 94 
                     v e+ nq +f  + G   ++e+ ++de+ r++f + +q   +  s   k++++ +d  ++    ++++DvGGG G + + i+++  +++ +v Dl
      KHJ32078.1 277 VIEEPNQSPFALTNGNMpIYEVLANDEKRRLRFAQSMQyltSGDSYDLKHIINGYDWASIditgTRMLDVGGGLGHISAYIAAHTKELHFVVQDL 371
                     77888999*******766***************9988722255678899*******8777444468***************************** PP

                     HHHHHHH...HHHS.-----TTEEEEES-TTT...S-----SEEEEESSGGGS-HHHHHHHHHHHHHH--TT-EEEEEE----TTS---HHHHHH CS
  Methyltransf_2  95 peVveaA...kehl.sageeervefvgGdffk...dslPeaDaillkrvlhDwsdekcvklLkrvkkalpagGkvivveavlgadpsgeletelv 182
                     p+Vv++A   k+ l +a++ +r++f   +ff    +s P+ D+i+l ++ h wsd+  +++ + +   l++gG+v ++e +l+++  g  +t+ +
      KHJ32078.1 372 PSVVADAiaqKQNLvEAHLLDRITFLPLSFFVphpSSTPQFDIIFLRWITHNWSDKYTRQIFRAMIPVLKKGGQVFIAEFLLSEESLGVDTTQTI 466
                     ****9986666777799999***********533378999********************************************99988888877 PP

                     ....HHHHHHCSS-----HHHHHHHHHHCT CS
  Methyltransf_2 183 ....dlimlvqteGkeRteaeyeellseaG 208
                         d+im v    keRt++  ++l+++ G
      KHJ32078.1 467 glrmDMIMGVGFSAKERTASGLRKLMEDVG 496
                     7788999999999************99877 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       4.7   6.4e+03      30      56 ..      45      70 ..      34      74 .. 0.76
   2 !   28.2   0.0   1.7e-09   2.3e-06       1      99 []     344     446 ..     344     446 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 4.7
  Methyltransf_12 30 psaiedakeklakrennnnnnveleal 56
                     ++ +  a++ + +++++ n++v+l+ +
       KHJ32078.1 45 TQIL-EAAKAIDQEIDRTNKEVKLDPI 70
                     4555.8888889999999999888766 PP

  == domain 2  score: 28.2 bits;  conditional E-value: 1.7e-09
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg..ssfDlvvasnvlhhl..kdirevldnir 90 
                      L++G+G G+++++++++++++++++ D+ + + ++ ++k +  e++  +++++  l+ +  +++   +fD++++    h++  k +r++++ + 
       KHJ32078.1 344 LDVGGGLGHISAYIAAHTKELHFVVQDLPSVVADAIAQKQNLVEAHLLDRITFLPLSFFVPHPSstPQFDIIFLRWITHNWsdKYTRQIFRAMI 437
                      8***************************999999***********************9998888999**************9999********* PP

  Methyltransf_12  91 klLkpgGrl 99 
                       +Lk+gG++
       KHJ32078.1 438 PVLKKGGQV 446
                      *******85 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   3.8e-09   5.3e-06       2      97 .]     344     444 ..     343     444 .. 0.83

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 3.8e-09
                      EEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHH..TTT..TEEEEESBC.CGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHH CS
  Methyltransf_25   2 LdlGcGtGrltlalakrlgkakvtgvDiseemleaareraee..egl..nvefvqgda.edlpfedgsfDlvvssgalhhlsdedlekalkeia 90 
                      Ld+G G G++++++a++ ++ +++  D+ +   +a++++ +   ++l  +++f+  ++    p    +fD+++++   h +sd+ ++++++ + 
       KHJ32078.1 344 LDVGGGLGHISAYIAAHTKELHFVVQDLPSVVADAIAQKQNLveAHLldRITFLPLSFfVPHPSSTPQFDIIFLRWITHNWSDKYTRQIFRAMI 437
                      9****************989*******97777666554443322344799***99999444678888*******75577799************ PP

                      HHEEEEE CS
  Methyltransf_25  91 rvLkpgG 97 
                       vLk+gG
       KHJ32078.1 438 PVLKKGG 444
                      ******9 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   3.3e-08   4.5e-05       1      96 []     344     448 ..     344     448 .. 0.81

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 3.3e-08
                      EEET-TTSHHHHHHHHTT..SEEEEEES-HHHHHHH..HHHCCHHT-..EEEETTEECCCTSS-TT..-EEEEEEES-CCC-..CCHHHHHHHH CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg..arvvgvDlskemlkla..kekaseegl..kvefvvadaeklpfedn..sfDlvvssevlhhv..edpekalkei 84 
                      LdvG G G +++++a +    + v  Dl   + ++   k++ +e++l  +++f+  ++  +p +++  +fD++++++  h++  +  +++++ +
       KHJ32078.1 344 LDVGGGLGHISAYIAAHTkeLHFVVQDLPSVVADAIaqKQNLVEAHLldRITFLPLSFF-VPHPSStpQFDIIFLRWITHNWsdKYTRQIFRAM 436
                      8**************77767777777776655544435666666666***********9.45555444**************9999******** PP

                      HHHEEEEEEEEE CS
  Methyltransf_11  85 aRvLkpgGllvi 96 
                        vLk+gG ++i
       KHJ32078.1 437 IPVLKKGGQVFI 448
                      ********9986 PP

>> Methyltransf_PK  AdoMet dependent proline di-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   1.1e-07   0.00015      57     173 ..     341     462 ..     328     476 .. 0.84

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 1.1e-07
  Methyltransf_PK  57 kvaldcGaGiGrvtknlLlk....llskvDlvepvekflekakeelaeekkkvgkvyvvglqeftPe...egrYdliWiqWcvghLtDedlvaf 143
                      +++ld+G G+G ++  +  +    ++   Dl  +v++ +++ + +l e  +   ++  ++l  f+P+     ++d+i+ +W+  + +D+   + 
       KHJ32078.1 341 TRMLDVGGGLGHISAYIAAHtkelHFVVQDLPSVVADAIAQKQ-NLVE-AHLLDRITFLPLSFFVPHpssTPQFDIIFLRWITHNWSDKYTRQI 432
                      5789*********98876542222557779*********9988.7887.799999999********9666679********************* PP

  Methyltransf_PK 144 lkrckkalkpnGlivvkenvakeekdelDk 173
                      ++  +  lk++G + + e + +ee   +D 
       KHJ32078.1 433 FRAMIPVLKKGGQVFIAEFLLSEESLGVDT 462
                      **************9999887777655555 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0     1e-06    0.0014      45     154 ..     337     451 ..     330     460 .. 0.77

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 1e-06
                      S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHH.HHHHHHHHHTSS..TEEEEE--.TTT-TTS-T-EEEEEEES-GGG-S-HHH CS
  Ubie_methyltran  45 vkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLk.vgekklkeegki..nieflqan.aeeLpfeddsfDvvtvsfGlrnvtDklk 134
                      + +g+++lDv gG g +++ ++ + +e  + vv D+ + + + +++k+   e+    +i fl  +     p +   fD++ + +   n +Dk +
       KHJ32078.1 337 DITGTRMLDVGGGLGHISAYIAAHTKEL-HFVVQDLPSVVADaIAQKQNLVEAHLldRITFLPLSfFVPHPSSTPQFDIIFLRWITHNWSDKYT 429
                      56899****************9998765.56677876655541344443334433459***976514567777899***************864 PP

                      ..HHHHHHHHEEEEEEEEEEEE CS
  Ubie_methyltran 135 ..aLkeayrvlkpGGrlvvlef 154
                         ++ +  vlk GG++++ ef
       KHJ32078.1 430 rqIFRAMIPVLKKGGQVFIAEF 451
                      22799**************998 PP

>> CheR  CheR methyltransferase, SAM binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   2.1e-06    0.0029     109     173 ..     383     448 ..     365     463 .. 0.90

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 2.1e-06
                 CEEE-HHHHTTEEEEE--TTT.-SGGG--EEEEEE-SSGGGC-CHHHHHHHHHHHCCEEEEEEEEE CS
        CheR 109 sykvkkeikelvkFeklnlle.kksvlgklDvifcrnvliYfdeetqekvlerfaeklkpgglLll 173
                 +  v++++ ++++F +l  +  + s + ++D+if+r +    + +  +++ + +   lk+gg +++
  KHJ32078.1 383 QNLVEAHLLDRITFLPLSFFVpHPSSTPQFDIIFLRWITHNWSDKYTRQIFRAMIPVLKKGGQVFI 448
                 3449999*************999999**************************************98 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   3.2e-06    0.0044       4     113 ..     340     452 ..     338     483 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 3.2e-06
  Methyltransf_31   4 glrvlDlGCGtGeltfelaeelgpkaevvGiD...iseeaielArenaqklgldnveFeqgdiee.leklledekfDlilsnevlnaladp..d 91 
                      g+r+lD+G G G+++  +a    ++ ++v  D     ++ai + ++  + + ld+++F   +++   +++    +fD+i+ + + +  +d+   
       KHJ32078.1 340 GTRMLDVGGGLGHISAYIA-AHTKELHFVVQDlpsVVADAIAQKQNLVEAHLLDRITFLPLSFFVpHPSS--TPQFDIIFLRWITHNWSDKytR 430
                      689************9999.44557788888833346899999999*******************99965..568******9999776665338 PP

  Methyltransf_31  92 kileeiervlkpggilliedpr 113
                      +i++ ++ vlk+gg + i+++ 
       KHJ32078.1 431 QIFRAMIPVLKKGGQVFIAEFL 452
                      9**************9999876 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.3e-05     0.032      21     124 ..     338     455 ..     303     498 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.3e-05
  Methyltransf_23  21 raggrvLdiGcGtGillevlrengf..svtgvDl.speaveiae..............kakkaqkdqfdeqeaaepqgkfdlIvlrevlehvpd 97 
                       +g r Ld+G G G+ + +++++ +  ++++ Dl s +a +ia+                + ++++++     + +  +fd+I lr  +++  d
       KHJ32078.1 338 ITGTRMLDVGGGLGHISAYIAAHTKelHFVVQDLpSVVADAIAQkqnlveahlldritFLPLSFFVPH-----PSSTPQFDIIFLRWITHNWSD 426
                      56779***************887664466677751333333333444444555555553333444444.....33556**************98 PP

  Methyltransf_23  98 ..ppellrqiatllkpgGylllseplasl 124
                            +r +   lk gG +++ e+l s 
       KHJ32078.1 427 kyTRQIFRAMIPVLKKGGQVFIAEFLLSE 455
                      5566788888889**********997653 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   3.2e-05     0.044      32     136 ..     340     447 ..     334     458 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.2e-05
                 CSEEEEET-TTSHHHHHHHHHTTC.EEEEEE...SBHHHHHHHHHHHHHTTGC.EEEEE-STTTTST..TS-EEEEEE---STTTCHCHHHHHHHHHHH CS
         MTS  32 sgkvlDlGcGaGvlgaalakespeaevtlvd...vdarAlesakenleankle.vevvasdvleeve..ekkfdlivsNPPfhagkatelavaeeliae 124
                   ++lD+G G G ++a +a++++e++ ++ d   v a A++  ++ +ea+ l+ ++++  + +   +    +fd+i      h+ ++   + +++++++
  KHJ32078.1 340 GTRMLDVGGGLGHISAYIAAHTKELHFVVQDlpsVVADAIAQKQNLVEAHLLDrITFLPLSFFVPHPssTPQFDIIFLRWITHNWSD---KYTRQIFRA 435
                 4679********************997777732245677777777777777777777666655544422456777766554444444...666666666 PP

                 HHHHEEEEEEEE CS
         MTS 125 AkeaLkegGeLl 136
                    +Lk+gG+ +
  KHJ32078.1 436 MIPVLKKGGQVF 447
                 666666666665 PP

>> DUF938  Protein of unknown function (DUF938)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00012      0.17      22     138 ..     336     447 ..     332     449 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00012
      DUF938  22 lakttervLEiasGtGqHAvffApalpnlkwqpsdqdeelresiaawadelalsnlkpPleldvtaevapvereappapasidailsinllHispwsav 120
                 ++ t++r+L+++ G G+  +++A++ ++l++   d ++ + ++ia+ ++ +  + l       +t  + +   + p +  ++d i+   + H  + + +
  KHJ32078.1 336 IDITGTRMLDVGGGLGHISAYIAAHTKELHFVVQDLPSVVADAIAQKQNLVEAHLLD-----RITFLPLSFFVPHPSSTPQFDIIFLRWITHNWSDKYT 429
                 5667889********************************999998865433332222.....2333333333333445556777777777777777777 PP

      DUF938 121 eglfagagellkkkavlv 138
                   +f+++  +lkk++ ++
  KHJ32078.1 430 RQIFRAMIPVLKKGGQVF 447
                 777777777777777665 PP

>> DREV  DREV methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00014       0.2      71     120 ..     315     365 ..     307     388 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00014
        DREV  71 fvlseeqfrkllaiekespas.dqedkklldlGaGdGeitkrvaptfeevy 120
                 ++ s + +     i+++++as d + +++ld+G G G+i+  +a + +e++
  KHJ32078.1 315 YLTSGDSYDLKHIINGYDWASiDITGTRMLDVGGGLGHISAYIAAHTKELH 365
                 566777777777899****9968899******************9999853 PP

>> Bin3  Bicoid-interacting protein 3 (Bin3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   0.00025      0.34      10      41 ..     417     448 ..     412     454 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00025
        Bin3  10 tkwihLnkgDeglkrlfkkiyellkpgGvlil 41 
                  +wi  n+ D+  +++f++++ +lk+gG++++
  KHJ32078.1 417 LRWITHNWSDKYTRQIFRAMIPVLKKGGQVFI 448
                 58**************************8544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (526 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      575  (0.0320709); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.47
# Mc/sec: 3383.29
//
Query:       KHJ32079.1  [L=382]
Description: hypothetical protein EV44_g4890 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2700.43
//
Query:       KHJ32080.1  [L=540]
Description: putative mfs maltose permease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       906  (0.0505327); expected 358.6 (0.02)
Passed bias filter:                      707  (0.0394333); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 3903.59
//
Query:       KHJ32081.1  [L=360]
Description: putative ura4 dihydroorotase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.8e-05   22.8   0.0    0.00012   22.0   0.0    1.4  1  Amidohydro_2   Amidohydrolase
  ------ inclusion threshold ------
      0.031   14.8   0.0       0.25   11.8   0.0    2.2  2  CoA_binding_2  CoA binding domain
       0.04   14.3   0.1        2.3    8.6   0.0    2.5  2  BRCT           BRCA1 C Terminus (BRCT) domain


Domain annotation for each model (and alignments):
>> Amidohydro_2  Amidohydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0     2e-08   0.00012     101     190 ..      88     181 ..      69     216 .. 0.83

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 2e-08
                   HHHHHHHHTTECEEEEESSTTTCCTTTCGGH....HHHHHHHHHHT-EEEEE....CHHHCHHHHH.HHHHHHHHHHCCHHHHCTTSEEEESGGG CS
  Amidohydro_2 101 eleraveelgfkGvrlnphvggddllgdrld....rpifealeelglpvdihtGpspewlfggpqe.ttraiqplllsgvarkfPnlkivlaHgG 190
                   +  + ++ +g++G++ +p+    + ++  l+    +p+f a+ee g ++ +h G +p+ +  + ++  ++   ++ l  + +kfP+lkivl H+ 
    KHJ32081.1  88 AVVKEAHARGIVGIKSYPAGVTTNSNSGVLSyepfYPVFHAMEECGMVLNLH-GECPSDHTKDITIlNAESKFLPTLKLLHAKFPRLKIVLEHCT 181
                   55677888999999999998766666666666666*****************.9887777777776578888888999999************95 PP

>> CoA_binding_2  CoA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.2e-05      0.25      22      84 ..      34     102 ..      23     121 .. 0.79
   2 ?   -0.0   0.0       0.2   1.2e+03      65     107 ..     156     198 ..     143     204 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.2e-05
                    HHHHHT--EEEESSS-....SEETTEES----T......T--EEEE-S-HHHHGGGHHHHHHH--SEEE CS
  CoA_binding_2  22 yllehglpvvpVnpke....eeilgekvyaslae.d.pepvdlvdvftppeatpeivkealalgakavw 84 
                     +++ g+++v V p+     +++  + +y+s  e + p++  l +++++ e+tp++vkea+a+g+ ++ 
     KHJ32081.1  34 TIRAGGVNMVYVMPNLspplTSVSDVLSYKSRLEkEdPKVQFLMTLYLHKEITPAVVKEAHARGIVGIK 102
                    55667788888888887777999999999999974434544599*******************987765 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.2
                    HHHHGGGHHHHHHH--SEEEE-TT---HHHHHHHHHTT-EEE. CS
  CoA_binding_2  65 peatpeivkealalgakavwlqpgsedeeaaelaeeagirvvg 107
                     ++ ++++k ++a+ ++  ++ ++   +ea+e++ee g +vvg
     KHJ32081.1 156 ESKFLPTLKLLHAKFPRLKIVLEHCTTKEAIEVVEECGANVVG 198
                    5566677777777777777888888889999999999999985 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0   0.00039       2.3      31      70 ..     137     176 ..     132     179 .. 0.91
   2 ?    3.5   0.0     0.015        91      20      42 ..     180     202 ..     176     241 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00039
                 HTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEE CS
        BRCT  31 ehGGkvttevskktthlvvgepesrslkylealklnipiv 70 
                 ++ G + ++++k++t+l + + ++ +lk+l+a+    +iv
  KHJ32081.1 137 NLHGECPSDHTKDITILNAESKFLPTLKLLHAKFPRLKIV 176
                 67899999*******************************9 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.015
                 HHHHHHHHHHHHTTCEEESSCST CS
        BRCT  20 ftrdeleelikehGGkvttevsk 42 
                  t++e+ e+++e+G+ v++ ++ 
  KHJ32081.1 180 CTTKEAIEVVEECGANVVGTITI 202
                 57899999*********766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       331  (0.0184617); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2616.77
//
Query:       KHJ32082.1  [L=175]
Description: putative 40s ribosomal protein s10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.9e-40  136.8   0.2    2.4e-40  136.5   0.2    1.1  1  S10_plectin  Plectin/S10 domain


Domain annotation for each model (and alignments):
>> S10_plectin  Plectin/S10 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.5   0.2   1.3e-44   2.4e-40       1      92 [.       7      97 ..       7      98 .. 0.98

  Alignments for each domain:
  == domain 1  score: 136.5 bits;  conditional E-value: 1.3e-44
                 --HCHHHHHHHHCCCCSCEEEE--SS----SSS---HHHHHHHHHHCCCCTSEEEEEETTEEEEEE-HHHHHHHHHHHXXXXSXHHHHHXXX CS
  S10_plectin  1 ipkknrkaiyeylfkegvlvakkdfelkkheelnvpnlqvikalqSLksrgyvkeqfaWrhyYytLtneGieylreylhlpeeivPatlkks 92
                 ipk++rk+++eylf+egvlvakkdf+ ++h++++ +nl+v+k++qSL+srgyvk+qf+W++yYytLt eG++ylre+lhlp++ivPat+ k+
   KHJ32082.1  7 IPKSDRKKVHEYLFREGVLVAKKDFN-SSHPDIETKNLYVVKTCQSLTSRGYVKTQFSWQYYYYTLTPEGLDYLREWLHLPADIVPATHIKQ 97
                 89************************.8*************************************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       327  (0.0182386); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1275.95
//
Query:       KHJ32083.1  [L=214]
Description: putative upf0667 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-64  217.0   0.9    1.6e-64  216.7   0.9    1.1  1  Sde2_N_Ubi  Silencing defective 2 N-terminal ubiquitin domain


Domain annotation for each model (and alignments):
>> Sde2_N_Ubi  Silencing defective 2 N-terminal ubiquitin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.7   0.9   8.7e-69   1.6e-64       2     164 .]       7     168 ..       6     168 .. 0.97

  Alignments for each domain:
  == domain 1  score: 216.7 bits;  conditional E-value: 8.7e-69
  Sde2_N_Ubi   2 nvlvssfdgltlpstlsltlpstatvsdlvdklserlpeslkesliLttvsnkqlllssdvslssllassadsellslrllvrlrGGKGGFGSqLRaag 100
                 nvlv+sf+gl lpstlsl+l +++t+++l+++++erlp+   ++liLtt+snkql   s+  +s+ll   +d  l+ lrl+v+l+GGKGGFGSqLRaag
  KHJ32083.1   7 NVLVTSFPGLGLPSTLSLPLSTETTINQLYSRINERLPKH-DSRLILTTTSNKQLSNISTNLISTLLCPVSD--LICLRLSVPLCGGKGGFGSQLRAAG 102
                 8**************************************9.666**************************99..************************* PP

  Sde2_N_Ubi 101 grmsskkksn..enndscRdldGrRLrtvkeakalaeylaekperekkekearrkrleavveaaek 164
                 grmssk+k+   ++n s+R+ldGrRLrtv+eakalaeyla+kpe+ k+eke+rrk++e+++e ae+
  KHJ32083.1 103 GRMSSKRKRGqgDENASSRNLDGRRLRTVNEAKALAEYLAIKPEMAKREKEERRKKWEQIIELAER 168
                 ********9999**************************************************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1101  (0.0614089); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1641.00
//
Query:       KHJ32084.1  [L=353]
Description: putative g protein alpha subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   5.6e-105  351.4   4.4   6.8e-105  351.1   4.4    1.1  1  G-alpha    G-protein alpha subunit
    4.1e-15   55.7   0.6    1.4e-10   40.9   0.0    2.3  2  Arf        ADP-ribosylation factor family
    1.3e-05   25.4   0.2      0.073   13.3   0.0    2.5  2  Roc        Ras of Complex, Roc, domain of DAPkinase
    0.00064   19.1   1.2      0.096   12.0   0.1    2.5  2  Gtr1_RagA  Gtr1/RagA G protein conserved region
  ------ inclusion threshold ------
      0.082   12.7   0.0       0.24   11.2   0.0    1.7  2  AAA_29     P-loop containing region of AAA domain
       0.12   12.0   0.4       0.34   10.5   0.4    1.7  1  THB        Tri-helix bundle domain


Domain annotation for each model (and alignments):
>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  351.1   4.4  2.3e-108  6.8e-105       2     354 .]      13     343 ..      12     343 .. 0.93

  Alignments for each domain:
  == domain 1  score: 351.1 bits;  conditional E-value: 2.3e-108
                 XXXXXXXXXXXXXXXXXXE..EEEEEEEESTTSSHHHHHHHHHHHCS--.--HHHHHCCHHHHHHHHHHHHHHHHHHHHHTT.......HHHC-SS-SC CS
     G-alpha   2 rtssaidkslkaerkarkkkrevkllllGqseSGKsTilkqlkllykkg.fseeelatwraviqlnivrsiktilealesleselsesfelqelkerld 99 
                 r+s++id+ l++e+ka kk   +kllllG++eSGKsTilkq++l+y+k+ f+++e+++wr +i++ni++ ++  ++a+++++ e+    ++ +  + l 
  KHJ32084.1  13 RRSREIDSLLRREEKAMKK--VIKLLLLGAGESGKSTILKQMRLIYTKEgFTKQEKEEWRGIIFNNILDGLRITINAMQEFNFEF----QNTATLQYLP 105
                 789****************..***********************995555******************************99999....4555554444 PP

                 CCS-HCHHHH..........HHCCHHC-HCHHHHHHHHCCSHHHHHHHCCGCCTT--TTHHHHHCTHHHHCSTT----CHHHHCS-----SEEEEEEEC CS
     G-alpha 100 plkkveasliaklssateeeqeiefnpraevgedikaLwndpgiqelyerrnkiklednaeyFlddleritspdYlptddDilkarlktvGisetkfev 198
                  +k++ +             + + +n+  +    +k++w+dpg+q+ +++  k+ l dn++yF++dl+r++++d++pt++Dil+arl+t+Gi+et f++
  KHJ32084.1 106 VIKQACDI------------EPEDLNS-MKHLAVFKSVWSDPGFQKAVNSG-KFALHDNLQYFFSDLDRLFNKDFVPTNQDILQARLRTTGITETVFDL 190
                 44444444............5666666.78899******************.*********************************************** PP

                 T-TEEEEEEEE-SSHHHHHGTCCCTTTECEEEEEEEGGGTT-B-SS-TTSBHHHHHHHHHHCCCC-GGGTTSEEEEEEE-HHHHHHHCCCS-GGGC.CT CS
     G-alpha 199 dsklefrivdvgGqrserkkWvpffddvdaiiFlvslsefdqvlyedekvnrleeslklFkeicnnkllkntpiiLflnKlDileeKlkkgklsky.fp 296
                 + + ++r++dvgGqrserkkW+++f++v+a+iFlv++s++dq+l+ed++ n+++e+l l+++i n+ ++k++ +iLflnK+D++++K+ +++++ky f+
  KHJ32084.1 191 G-TFKYRMFDVGGQRSERKKWIHCFENVNALIFLVAISGYDQCLAEDREGNQMQEALMLWESIANSHWFKKSALILFLNKIDLFRSKVAHSPITKYgFT 288
                 9.*********************************************************************************************769* PP

                 T--H.CCHHHHHHHHHHHHHHCCCCCCESGGSCEEEEEE-TT-HHHHHHHHHHHHHHH CS
     G-alpha 297 syegrkndlesvlkylrnkFeeihkeksnnrrkiythftsatdtkevqkviesvrdti 354
                 ++ g+ +d+   +ky+ +kF+++ +   ++++++y+hft+atdt+ ++ +++sv+d+i
  KHJ32084.1 289 DFRGDTKDASLTSKYFMDKFTSLSR---SPSQEVYPHFTNATDTDLLKVTMASVQDMI 343
                 ***********************66...55669***********************98 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.2   2.1e-05     0.063       9      35 ..      27      53 ..      19      62 .. 0.85
   2 !   40.9   0.0   4.7e-14   1.4e-10      43     133 ..     178     278 ..     168     300 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.1e-05
                TT.TTEEEEEEEESTTSSHHHHHHHHH CS
         Arf  9 klkkkelrilllGLDnaGKtTilkklk 35
                k +kk +++lllG  ++GK+Tilk+++
  KHJ32084.1 27 KAMKKVIKLLLLGAGESGKSTILKQMR 53
                556899*****************9986 PP

  == domain 2  score: 40.9 bits;  conditional E-value: 4.7e-14
                 SSSSSEEEEEEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEE.....E.TT-CT....THHHHHHHHHHHCTSGCCTTSEEEEEEE-TTSTTSS CS
         Arf  43 vPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvv.....D.sadre....RleeakeeLkalleeeelkevallvlaNKqDlpeal 131
                   T+g +       ++k++++DvGGq++ R+ W + fe+++a+if+v     D +  ++     ++ea    +++ +++  k+ al+++ NK+Dl  + 
  KHJ32084.1 178 LRTTGITETVFDLGTFKYRMFDVGGQRSERKKWIHCFENVNALIFLVaisgyDqCLAEDregnQMQEALMLWESIANSHWFKKSALILFLNKIDLFRSK 276
                 567788877888999*******************************944444222233311224666666677888888889************98776 PP

                 -H CS
         Arf 132 se 133
                  +
  KHJ32084.1 277 VA 278
                 55 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0   0.00028      0.84       1      28 [.      34      65 ..      34     110 .. 0.73
   2 !   13.3   0.0   2.4e-05     0.073      16     119 ..     158     271 ..     156     272 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00028
                EEEEESSTTSSHHHHHHC....HCT-CCC-EE CS
         Roc  1 KvvlvGdsgvGKtsllkr....fvedkfseke 28
                K++l+G +++GK+++lk+    ++++ f+++e
  KHJ32084.1 34 KLLLLGAGESGKSTILKQmrliYTKEGFTKQE 65
                89**************9833333455555554 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 2.4e-05
                 HHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTT.T-HHHHCTSCEEEEE....EE.........GHHHHCHHHHHH CS
         Roc  16 lkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrs.lhplylreaalailv....yd.........srssenlkeWlk 100
                 l+r+ +++f ++++ ++++ + t+ +t  ++v    ++ ++k++++D++Gq   r+   +++ + +al++lv    yd         ++ +e l  W +
  KHJ32084.1 158 LDRLFNKDFVPTNQDILQARLRTTGIT--ETV---FDLGTFKYRMFDVGGQRSERKkWIHCFENVNALIFLVaisgYDqclaedregNQMQEALMLWES 251
                 5799999*************9998874..333...3567899*********887764889999999988887444445777653322222345567988 PP

                 HHHHH.CSSS-EEEEEE-TT CS
         Roc 101 elkkv.agkspvilvgnkiD 119
                   +++  +ks +il  nkiD
  KHJ32084.1 252 IANSHwFKKSALILFLNKID 271
                 8887746788899999**99 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.2    0.0029       8.7       1      17 [.      34      50 ..      34      59 .. 0.88
   2 !   12.0   0.1   3.2e-05     0.096      42     127 ..     187     276 ..     166     348 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0029
   Gtr1_RagA  1 kvLLmGksgsGKtsmrs 17
                k+LL+G ++sGK+++ +
  KHJ32084.1 34 KLLLLGAGESGKSTILK 50
                89***********9965 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 3.2e-05
   Gtr1_RagA  42 vrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDve...........sreleedletlkeilealrqyspeakvfvlihKmDliqed 127
                 v  lg  +  ++D+gGq++  ++       + f+nv++li+++ ++            ++++e+l  +++ + + +   ++  +  +++K+Dl +++
  KHJ32084.1 187 VFDLGTFKYRMFDVGGQRSERKKW-----IHCFENVNALIFLVAISgydqclaedreGNQMQEALMLWES-IANSH-WFKKSALILFLNKIDLFRSK 276
                 445778888999*****9887775.....799*************9998888874422235555544444.44444.44566677899****98755 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   8.1e-05      0.24      25      39 ..      35      49 ..      24      61 .. 0.81
   2 ?   -3.6   0.0       3.2   9.7e+03      33      45 ..     142     154 ..     140     163 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 8.1e-05
      AAA_29 25 tlltGpsGsGKSTll 39
                 ll G+ +sGKST+l
  KHJ32084.1 35 LLLLGAGESGKSTIL 49
                79************9 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 3.2
      AAA_29  33 sGKSTllDAiqal 45 
                 sGK +l D +q+ 
  KHJ32084.1 142 SGKFALHDNLQYF 154
                 8999998888775 PP

>> THB  Tri-helix bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.4   0.00012      0.34      20      28 ..     284     292 ..     282     292 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00012
         THB  20 qYGitDlRG 28 
                 +YG+tD+RG
  KHJ32084.1 284 KYGFTDFRG 292
                 8*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.37
# Mc/sec: 2860.90
//
Query:       KHJ32085.1  [L=153]
Description: putative nuclear cap-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-14   52.7   0.0    4.3e-14   52.1   0.0    1.3  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
  ------ inclusion threshold ------
      0.021   14.9   0.0       0.03   14.4   0.0    1.3  1  RRM_7     RNA recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.1   0.0   4.8e-18   4.3e-14       1      70 []      11      84 ..      11      84 .. 0.97

  Alignments for each domain:
  == domain 1  score: 52.1 bits;  conditional E-value: 4.8e-18
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE....TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrd....etgkskgfafVeFeskedAekAlealngkklggrelk 70
                ++Vg+L+++vt ++L++ F +fG+i +i+l++     + ++++gf+++eFe+++d  +A+++++  +l g+++k
  KHJ32085.1 11 IYVGGLSKNVTISDLHAAFIPFGEIADISLPKPevpnALEPHRGFGYIEFEDPDDTFDAINNMDQAELFGKVIK 84
                8******************************999988999*******************************996 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   3.3e-06      0.03       4      68 ..      11      71 ..       8      91 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.3e-06
       RRM_7  4 vFvGGlPiDiteeelkatfkefgkvl.vdwPkkaeskkkaaenskaakgyvflvfedeksvkaLle 68
                ++vGGl  ++t ++l+a+f  fg+++ +  Pk  e +++     ++++g+ ++ fed +   + ++
  KHJ32085.1 11 IYVGGLSKNVTISDLHAAFIPFGEIAdISLPKP-EVPNA----LEPHRGFGYIEFEDPDDTFDAIN 71
                89*********************9854888864.44444....34678999999998765555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       284  (0.0158403); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.20s 00:00:00.55 Elapsed: 00:00:00.34
# Mc/sec: 1346.63
//
Query:       KHJ32086.1  [L=340]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.093   11.7   0.0       0.14   11.1   0.0    1.2  1  DUF3987    Protein of unknown function (DUF3987)
       0.27   11.5   3.0       0.38   11.0   1.4    1.9  2  Hydin_ADK  Hydin Adenylate kinase-like domain


Domain annotation for each model (and alignments):
>> DUF3987  Protein of unknown function (DUF3987)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   1.6e-05      0.14     205     263 ..      90     150 ..      89     166 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 1.6e-05
     DUF3987 205 psvlkelianpesresGllaRflfalppst.agwrdvds.ppipdavleayearfrellae 263
                 p  l+e++a+++ re+G+ aR+++++  +  +++  v+  +++++++ ea++a++r  +a+
  KHJ32086.1  90 PRELAEIVATRQRRERGWHARLMICTTTMSnKESTLVNFkDDVEKDEVEAFKAYLRLAIAN 150
                 6789999***************999998662555555544667777778888888766665 PP

>> Hydin_ADK  Hydin Adenylate kinase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.32   2.8e+03      45      67 ..     105     127 ..      70     171 .. 0.61
   2 ?   11.0   1.4   4.3e-05      0.38      58     163 ..     191     300 ..     185     305 .. 0.67

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.32
   Hydin_ADK  45 aGlrArelCaeaaieqaekekee 67 
                  G++Ar +  +++++++e    +
  KHJ32086.1 105 RGWHARLMICTTTMSNKESTLVN 127
                 34555544444444444433333 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 4.3e-05
   Hydin_ADK  58 ieqaekekeeaaeeaekkegqlsvealvkktselssaaeekaasskiskkkktsvvsg....kkkaesegaksqkqke.kktsetaqissspplaapia 151
                 + q +k+  + + ++++++  l ++++ ++t ++ + + +k+a+ ++s+kk+   vs+    k+k++++   +++    +k++e  + ss   l   i 
  KHJ32086.1 191 TPQIMKSVASIGGNTQEVHKLLKNPKINQNTWATIARNGQKKARVILSNKKQVASVSQsmiiKEKSQTKFIDKRQFVRiSKEHELLKLSSAG-LREVIV 288
                 55666666666777777777788888888888777777888888777777776666666666666666655555544404444444556655.66669* PP

   Hydin_ADK 152 rrLsvsasvage 163
                 ++Ls+sas  g 
  KHJ32086.1 289 KKLSISASLIGK 300
                 ********9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       710  (0.0396006); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 2911.15
//
Query:       KHJ32087.1  [L=136]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       778  (0.0433934); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.20s 00:00:00.56 Elapsed: 00:00:00.35
# Mc/sec: 1170.85
//
Query:       KHJ32088.1  [L=99]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.031   15.2   0.3      0.043   14.7   0.2    1.4  1  tRNA_synt_1c_R2  Glutaminyl-tRNA synthetase, non-specific RNA


Domain annotation for each model (and alignments):
>> tRNA_synt_1c_R2  Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.2   2.4e-06     0.043       8      49 ..      45      85 ..      38      98 .. 0.59

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 2.4e-06
  tRNA_synt_1c_R2  8 qllelLGPKteaDnlkpkkkkkkkkkkkeekkkaakkakkek 49
                     ++ ++LG+Kt++D ++  +++  + +++ee +++++ +++++
       KHJ32088.1 45 EYQAVLGAKTDEDLAASTQNEILDITSSEEPEAENN-TNNSQ 85
                     67789********65554444444444333333333.33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       827  (0.0461264); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 727.38
//
Query:       KHJ32089.1  [L=684]
Description: putative sulfur metabolite repression control protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.9e-43  144.6  22.2    3.4e-07   30.8   0.1    8.5  7  WD40         WD domain, G-beta repeat
    9.5e-12   44.6   0.4    2.3e-11   43.4   0.4    1.7  1  F-box-like   F-box-like
    3.3e-10   39.3  11.5      0.026   13.2   0.4    6.0  6  Nup160       Nucleoporin Nup120/160
    4.2e-09   36.1   3.7      9e-09   35.0   1.0    2.4  2  F-box        F-box domain
    1.1e-08   35.2   3.9       0.64   10.4   0.0    6.3  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    0.00011   22.1   0.4    0.00045   20.1   0.2    2.2  2  F-box_4      F-box
  ------ inclusion threshold ------
      0.069   12.5   0.3       0.54    9.5   0.1    2.4  2  WD40_like    WD40-like domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.1   4.9e-08   0.00012       4      38 .]     335     368 ..     332     368 .. 0.85
   2 !   30.8   0.1   1.3e-10   3.4e-07       1      38 []     372     408 ..     372     408 .. 0.92
   3 !   19.5   0.0   5.2e-07    0.0013       1      38 []     412     448 ..     412     448 .. 0.82
   4 !   30.6   0.7   1.6e-10   4.1e-07       4      38 .]     454     489 ..     451     489 .. 0.91
   5 !    9.6   0.8   0.00071       1.8      14      38 .]     542     580 ..     493     580 .. 0.70
   6 !   19.7   0.0   4.3e-07    0.0011       1      38 []     584     620 ..     584     620 .. 0.85
   7 !   18.7   0.0   8.8e-07    0.0023       1      37 [.     624     659 ..     624     660 .. 0.87

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 4.9e-08
                 EEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 
                 +++++GH ++v +l      ++    la+Gs+D t++iW+
  KHJ32089.1 335 TKVFKGHsNGVMCL------QLedniLATGSYDLTIKIWN 368
                 678****999****......5555559************8 PP

  == domain 2  score: 30.8 bits;  conditional E-value: 1.3e-10
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g+c+rtl+GH  ++++l  + d++ l+sGs D+tvriW+
  KHJ32089.1 372 GKCIRTLSGHtAGIRAL--QFDNQKLISGSLDQTVRIWN 408
                 79********888****..77888899***********8 PP

  == domain 3  score: 19.5 bits;  conditional E-value: 5.2e-07
                 TEEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 
                 g+c+  + +H  +v +l      ++    lasGs+D tv++W+
  KHJ32089.1 412 GECINAYQAHtAGVIAL------NFvdniLASGSMDTTVKVWN 448
                 689999****7777788......55555489***********8 PP

  == domain 4  score: 30.6 bits;  conditional E-value: 1.6e-10
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + +l GH ++v++++++ d++ l+s+sdD+tvr+Wd
  KHJ32089.1 454 VFVLQGHsDWVNAVRVDADSRTLFSASDDRTVRLWD 489
                 67899**666*************************9 PP

  == domain 5  score: 9.6 bits;  conditional E-value: 0.00071
                 EEEEEETTSSE..............EEEEETTSEEEEEE CS
        WD40  14 tslafspdgaw..............lasGsdDgtvriWd 38 
                 +s    p  +w              +++G  D tvr+Wd
  KHJ32089.1 542 NSHPSTPQTNWheswptkrpkppryILTGALDSTVRLWD 580
                 4444556666666667777777777899*99*******9 PP

  == domain 6  score: 19.7 bits;  conditional E-value: 4.3e-07
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g+cl+tl GH  +++++    d   +++G +D+ v++Wd
  KHJ32089.1 584 GECLQTLFGHvEGIWAV--AGDTLRVVTGAEDKMVKVWD 620
                 68********8889999..44444479***********9 PP

  == domain 7  score: 18.7 bits;  conditional E-value: 8.8e-07
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 g+c +t+ GH ++vt++   +d+++ +sGs+D+ vr++
  KHJ32089.1 624 GKCEKTFLGHtGPVTCV-GLSDSRM-CSGSEDCEVRLY 659
                 699*******888****.7777777.69********98 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   0.4   8.9e-15   2.3e-11       1      46 [.     171     215 ..     171     217 .. 0.96

  Alignments for each domain:
  == domain 1  score: 43.4 bits;  conditional E-value: 8.9e-15
  F-box-like   1 isrLPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrrlv 46 
                 is LP Ei ++I+ +L++++L+  a+V+r+Wr +a d+  +W+r++
  KHJ32089.1 171 ISALPCEIAIKILCFLDTKSLCKSAQVSRKWRKLADDD-MVWQRMC 215
                 689********************************999.*****99 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   2.6e-05     0.066     227     255 ..     349     377 ..     341     381 .. 0.87
   2 !    6.3   0.1    0.0012       3.1     229     254 ..     391     416 ..     381     432 .. 0.85
   3 ?    1.4   0.0     0.037        94     230     251 ..     432     453 ..     417     461 .. 0.83
   4 !   13.2   0.4     1e-05     0.026     227     255 ..     468     498 ..     456     502 .. 0.85
   5 !    4.8   0.0    0.0035       9.1     232     255 ..     566     589 ..     564     593 .. 0.90
   6 !    3.5   0.0     0.009        23     238     254 ..     612     628 ..     599     632 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.6e-05
                 ..TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 227 eigqtylfalsrdgkLrvWnlltgkclat 255
                 + ++++l++ s d ++++Wn++tgkc++t
  KHJ32089.1 349 QLEDNILATGSYDLTIKIWNVDTGKCIRT 377
                 44799**********************98 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0012
                 TTTEEEEEETT-EEEEEETTTTEEEE CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkcla 254
                 +++ l + s+d+++r+Wn +tg c+ 
  KHJ32089.1 391 DNQKLISGSLDQTVRIWNWRTGECIN 416
                 566677889***************86 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.037
                 TTEEEEEETT-EEEEEETTTTE CS
      Nup160 230 qtylfalsrdgkLrvWnlltgk 251
                 +++l++ s d +++vWn ++++
  KHJ32089.1 432 DNILASGSMDTTVKVWNFEDKS 453
                 6899999**********99887 PP

  == domain 4  score: 13.2 bits;  conditional E-value: 1e-05
                 ....TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 227 ei..gqtylfalsrdgkLrvWnlltgkclat 255
                 ++  ++ +lf++s d+++r+W+l+t +++ +
  KHJ32089.1 468 RVdaDSRTLFSASDDRTVRLWDLDTRQTIQV 498
                 4456999*******************99876 PP

  == domain 5  score: 4.8 bits;  conditional E-value: 0.0035
                 EEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 232 ylfalsrdgkLrvWnlltgkclat 255
                 y+++  +d ++r+W++ +g cl t
  KHJ32089.1 566 YILTGALDSTVRLWDVVSGECLQT 589
                 7888899**************988 PP

  == domain 6  score: 3.5 bits;  conditional E-value: 0.009
                 TT-EEEEEETTTTEEEE CS
      Nup160 238 rdgkLrvWnlltgkcla 254
                  d+ ++vW+l+tgkc  
  KHJ32089.1 612 EDKMVKVWDLRTGKCEK 628
                 6999**********965 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1      0.16     4e+02      25      39 ..     154     168 ..     146     170 .. 0.84
   2 !   35.0   1.0   3.5e-12     9e-09       3      47 ..     171     215 ..     169     216 .. 0.94

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.16
                 HHCTT-HHHHHHHTT CS
       F-box  25 alrrVSkgwrilids 39 
                  l+  S+++r+li+ 
  KHJ32089.1 154 QLSYLSTTVRDLIRI 168
                 6999********986 PP

  == domain 2  score: 35.0 bits;  conditional E-value: 3.5e-12
                 HHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHHHH CS
       F-box   3 lsrLPsevlrhILerLplsdllalrrVSkgwrilidsdrlwcksi 47 
                 +s LP e+  +IL++L++++l+  ++VS++wr+l d+d  w + +
  KHJ32089.1 171 ISALPCEIAIKILCFLDTKSLCKSAQVSRKWRKLADDDMVWQRMC 215
                 799************************************998765 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00025      0.64      44      90 ..     346     391 ..     320     393 .. 0.85
   2 !    8.0   0.0    0.0014       3.6      47      90 ..     389     431 ..     382     433 .. 0.85
   3 !    7.9   0.1    0.0015       3.8       9      77 ..     434     500 ..     432     510 .. 0.91
   4 ?    2.8   0.0     0.055   1.4e+02      46      87 ..     598     640 ..     563     645 .. 0.58
   5 ?    2.0   0.0     0.099   2.5e+02      51      75 ..     645     669 ..     641     683 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00025
  ANAPC4_WD40  44 LaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  ++ + ++++La +  d ++++ ++ +gk++++ls ++   +  l++ 
   KHJ32089.1 346 MCLQLEDNILATGSYDLTIKIWNVDTGKCIRTLSGHTA-GIRALQFD 391
                  5667889**************************99888.48888775 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0014
  ANAPC4_WD40  47 kpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  + d++ L  +  d +vr+ +  +g++++++++++   v  l++ 
   KHJ32089.1 389 QFDNQKLISGSLDQTVRIWNWRTGECINAYQAHTAG-VIALNFV 431
                  457788999************************995.8888876 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.0015
  ANAPC4_WD40   9 LiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsls 77 
                  ++A ++ d  + v  ++ + v+ l  ++++  v++++   d + L  a +d +vrl d  + ++++ ++
   KHJ32089.1 434 ILASGSMDTTVKVWNFEDKSVFVL--QGHSDWVNAVRVDADSRTLFSASDDRTVRLWDLDTRQTIQVFE 500
                  688889999999999999999999..89999********************************999876 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.055
  ANAPC4_WD40  46 WkpdgklLav..aysdgevrlldaesgkvvhslsvksekavtcl 87 
                  W   g  L v  + +d  v++ d  +gk+ +++  ++   vtc+
   KHJ32089.1 598 WAVAGDTLRVvtGAEDKMVKVWDLRTGKCEKTFLGHTG-PVTCV 640
                  44445444331144566666666666666666655555.36666 PP

  == domain 5  score: 2.0 bits;  conditional E-value: 0.099
  ANAPC4_WD40  51 klLavaysdgevrlldaesgkvvhs 75 
                  + ++ + +d evrl++ ++++v+ +
   KHJ32089.1 645 SRMCSGSEDCEVRLYSFKQEEVLAE 669
                  678999*************999864 PP

>> F-box_4  F-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.2   1.8e-07   0.00045       4      56 ..     170     222 ..     167     245 .. 0.86
   2 ?   -2.5   0.0       1.8   4.6e+03      77      89 ..     440     452 ..     419     459 .. 0.66

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 1.8e-07
     F-box_4   4 sLssLPlevlqhiaslLDsfsLsqLslvskllrevcssllqergiVllkWekk 56 
                  +s LP e+  +i+ +LD  sL++ ++vs++ r+++   +  + +  ++ ++k
  KHJ32089.1 170 FISALPCEIAIKILCFLDTKSLCKSAQVSRKWRKLADDDMVWQRMCEQHIDRK 222
                 6899******************************9988777777766666655 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.8
     F-box_4  77 lfskvksWkfedv 89 
                 + ++vk W+fed+
  KHJ32089.1 440 MDTTVKVWNFEDK 452
                 4456666776665 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1   0.00021      0.54      12     150 ..     352     493 ..     329     512 .. 0.60
   2 ?   -1.2   0.0       0.4     1e+03      16      90 ..     608     682 ..     599     684 .] 0.69

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00021
   WD40_like  12 gslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDGtillslleneeevenekieed.istvkviddklliGtnkGsiyvfsk 109
                  ++++ G+ d ++++ ++++++ +  + + +  +   +  d+++++ ++lD t+     + +e ++  + + + +   + +d+ l+ G+   ++ v++ 
  KHJ32089.1 352 DNILATGSYDLTIKIWNVDTGKCIRTLSGHTAGIRALQ-FDNQKLISGSLDQTVRIWNWRTGECINAYQAHTAgVIALNFVDNILASGSMDTTVKVWNF 449
                 45566666666666777777776666666666665443.466666677777777666666666666655544325556666666666666666666665 PP

   WD40_like 110 dlqleevllgqsseIkeikie..nnkiysLsesafi.vfdlfsq 150
                 + +++ vl g+s  ++ + ++  + +++s s+++ +  +dl++ 
  KHJ32089.1 450 EDKSVFVLQGHSDWVNAVRVDadSRTLFSASDDRTVrLWDLDTR 493
                 55666666666665555443311556666666554423444443 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.4
   WD40_like  16 lyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlDGtillsllenee.evenekieedistvkv 90 
                 + G++d+ ++v +l++++    + + +  v  +  l+d  +  ++ D  + l+ +++ee   en + e+++s+v+ 
  KHJ32089.1 608 VTGAEDKMVKVWDLRTGKCEKTFLGHTGPVT-CVGLSDSRMCSGSEDCEVRLYSFKQEEvLAENLSTENNLSIVTQ 682
                 5677777777777777777777777777766.44567777777888888888888888755566677777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (684 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4800.97
//
Query:       KHJ32090.1  [L=286]
Description: putative dephospho- kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-42  144.1   0.6    7.8e-21   74.5   0.3    2.2  2  CoaE      Dephospho-CoA kinase
     0.0032   17.0   0.5     0.0048   16.4   0.5    1.2  1  DUF4349   Domain of unknown function (DUF4349)
  ------ inclusion threshold ------
      0.053   14.1   0.3       0.17   12.5   0.2    2.2  1  AAA_18    AAA domain
      0.079   12.3   2.7        1.1    8.5   0.3    2.4  2  CcmH      Cytochrome C biogenesis protein
      0.093   11.7   0.3       0.14   11.1   0.3    1.2  1  IFT57     Intra-flagellar transport protein 57
       0.11   12.7   0.0       0.23   11.7   0.0    1.5  1  AAA_28    AAA domain
       0.48   10.1   1.6        6.6    6.5   0.0    3.2  4  DUF434    Protein of unknown function (DUF434)


Domain annotation for each model (and alignments):
>> CoaE  Dephospho-CoA kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.2   0.0   2.7e-22   6.9e-19       1      56 [.       2      59 ..       2      69 .. 0.92
   2 !   74.5   0.3   3.1e-24   7.8e-21      62     166 ..      93     206 ..      60     226 .. 0.84

  Alignments for each domain:
  == domain 1  score: 68.2 bits;  conditional E-value: 2.7e-22
                EEEEEEESTTSSHHHHHHHHHH..TT-EEEEHHHHHHHTTCCTHHHHHHHHHHHGGGC CS
        CoaE  1 livgltGgiasGKstvanlfad..lgvpivDaDlvArqvvepgsealkkiveeFgeei 56
                livgltGgia+GKstv+n++++  +++pi+DaD++Ar+vv+pg++a+ ki e+Fg+ i
  KHJ32090.1  2 LIVGLTGGIATGKSTVSNILSQapYNIPIIDADIIARHVVNPGTRAYYKIIEHFGPII 59
                69*******************9999******************************643 PP

  == domain 2  score: 74.5 bits;  conditional E-value: 3.1e-24
                 SE-HHHHHHHHHTS....HHHHHHHHHHHHHHHHHHHHHHHHH--S...SEEEEE-TTTTTTTGGGGSSEEEEEE-.-HHHHHHHHHHCC.TSTHHHHH CS
        CoaE  62 eLdReaLrkkvFad....peekkaLnallhPlirreikkelakles...kyvlldvPLLvEkqlekliervlvvdv.elelqveRlvard.gvseeevk 151
                  L+R aL++++F +     e++++Ln ++hP +r ei ke+ k +     +v+ldvPLL+E+ql+ l+  vl+v+v +++ q++Rl +rd  +s+++++
  KHJ32090.1  93 PLNRMALARTIFGNtkesRENRAILNRIVHPEVRLEIIKEVLKKYIcgyWMVILDVPLLFESQLDLLCGAVLLVTVrDMNVQMRRLQNRDiHLSSADAE 191
                 69**********76222257899**************99988777778899***********************9945899*********9******** PP

                 HHHHHS--HHHHHHH CS
        CoaE 152 aiiaaQlseeerlal 166
                 a+i++Q++ + +++ 
  KHJ32090.1 192 ARIQSQADLSAKVRK 206
                 *******99988754 PP

>> DUF4349  Domain of unknown function (DUF4349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.5   1.9e-06    0.0048      72     140 ..     171     239 ..     159     244 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.9e-06
     DUF4349  72 gkvtsrstsaeDVTeqyvDleaRlkaleasedrllallekaksvedlleiereLsevqaeieslegqlr 140
                  +v+ r  + +D+  + +D eaR++++ ++ +++++ l++ k+   ++   ++++e + e e+  +q++
  KHJ32090.1 171 MNVQMRRLQNRDIHLSSADAEARIQSQADLSAKVRKCLNRGKENGMIIYNDSDIQELNREVERVISQIK 239
                 68999999********************************99888888888888888888887777765 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   6.5e-05      0.17       1      25 [.       4      34 ..       4     194 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 6.5e-05
      AAA_18  1 IlltGtpGvGKttlakeLskrl.gf.....g 25
                ++ltG +++GK+t+++ Ls+   ++      
  KHJ32090.1  4 VGLTGGIATGKSTVSNILSQAPyNIpiidaD 34
                689***************9985444666652 PP

>> CcmH  Cytochrome C biogenesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1     0.015        38      42      75 ..     179     218 ..     158     220 .. 0.72
   2 ?    8.5   0.3   0.00043       1.1      94     122 ..     245     276 ..     240     285 .. 0.69

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.015
                 SS-BTTT--SH......HHHHHHHHHHHHHHHT--HHHHH CS
        CcmH  42 qnqsiadSnae......lAkdlrrevremlkaGksdeeiv 75 
                 qn +i+ S+a+        +dl ++vr+ l++Gk++  i+
  KHJ32090.1 179 QNRDIHLSSADaeariqSQADLSAKVRKCLNRGKENGMII 218
                 45555444443323333467**************998775 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00043
                 XXXXXXXXXXXXXXXXXXXXX...XXXXXXXX CS
        CcmH  94 astllLWlgPllllllgllvl...llllrrrk 122
                 + t+lLW++P+++ ++g++ l   +ll r++k
  KHJ32090.1 245 WWTYLLWIFPPFACCVGFWHLgrsWLLNRQWK 276
                 679**************876522244445554 PP

>> IFT57  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3   5.6e-05      0.14     173     213 ..     195     240 ..     165     247 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 5.6e-05
       IFT57 173 klesekkee.....kekekeeeiieskvdaaeWklEleRvlpqLkv 213
                 + + + + +     ++ +++  ii  + d +e + E+eRv +q+k 
  KHJ32090.1 195 QSQADLSAKvrkclNRGKENGMIIYNDSDIQELNREVERVISQIKR 240
                 11111111133346899**************************996 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     9e-05      0.23       4      36 ..       6      42 ..       3      64 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 9e-05
      AAA_28  4 itGgestGKTtlleaLaar..gypvv..pEaareile 36
                +tGg  tGK+t+++ L++   ++p++    +ar +++
  KHJ32090.1  6 LTGGIATGKSTVSNILSQApyNIPIIdaDIIARHVVN 42
                8****************98889999873334555555 PP

>> DUF434  Protein of unknown function (DUF434)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.27   6.8e+02      36      48 ..      95     107 ..      93     111 .. 0.83
   2 ?    6.5   0.0    0.0026       6.6      33      54 ..     110     131 ..     110     132 .. 0.89
   3 ?   -2.3   0.0       1.5   3.8e+03      32      42 ..     200     210 ..     199     211 .. 0.85
   4 ?   -0.7   0.1      0.46   1.2e+03      10      18 ..     268     276 ..     267     279 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.27
      DUF434  36 qRlaLaRcvssde 48 
                  R aLaR+++ + 
  KHJ32090.1  95 NRMALARTIFGNT 107
                 599*****99875 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0026
      DUF434  33 skrqRlaLaRcvssdeeieark 54 
                 s++ R +L+R v+++  +e +k
  KHJ32090.1 110 SRENRAILNRIVHPEVRLEIIK 131
                 6789***********9999887 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 1.5
      DUF434  32 LskrqRlaLaR 42 
                 Ls++ R+ L+R
  KHJ32090.1 200 LSAKVRKCLNR 210
                 89999999999 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.46
      DUF434  10 ryLLnRGYp 18 
                 ++LLnR  +
  KHJ32090.1 268 SWLLNRQWK 276
                 6*****876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       669  (0.0373138); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2048.19
//
Query:       KHJ32091.1  [L=523]
Description: putative nadph-adrenodoxin reductase arh1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-05   23.1   0.0     0.0005   19.4   0.0    2.4  2  Pyr_redox_2   Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.092   12.6   0.0       0.15   11.8   0.0    1.3  1  Asp_Glu_race  Asp/Glu/Hydantoin racemase


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   5.6e-08    0.0005       2     178 ..      72     230 ..      71     243 .. 0.76
   2 ?    0.2   0.0     0.039   3.5e+02     225     275 ..     364     424 ..     342     438 .. 0.65

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 5.6e-08
                  SEEEE--SHHHHHHHHHHHHHTS-EEEEE.TTHCHHHCSHHHHCHHHHHHHHHHHHHHHHHCHHHHCCCCHCCTCEEEEESCEEEEETEEECTCEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaqagakvtlve.legtclnggcllskallgvaedaeiasevvkklnqgielllgeevvkidpgkkkvklekkkegdeeki 98 
                  +++viG+GpAG+ ++ ++   ++++  v+  e+  + +g + + ++   +e ++ ++e+++++ q+ +++     v i +g + + l+ +        
   KHJ32091.1  72 RLAVIGSGPAGFYTSYKILS-KIETSFVDmYERLPVPFGLVRYGVAPDHPEVKN-CQEKFNEIAQSPRFVFV-GNVPIGEGLGSIPLRSLL------P 160
                  789*************9998.677777764466666677888888888888886.6688999****666555.489999999999996655......5 PP

                  EESEEEE---.EEE-BCTCTTC.TTBEECCSECHHHHHHCCSS-TSEEEEES-SHHHHHHHHHHHHHT-EEEEEESSSSSS CS
                  xxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  99 aydklvlAtG.ssprdlgipGvaenvgklvrtldsaealklkllpkrivvvGgGyiGvElAaalaklgkevtlveardrll 178
                   yd+++ A G s  r+lgipG+ +n     + + sa+++    +   ++v+G+G++++++A  l +  ++  l +  +  l
   KHJ32091.1 161 HYDAILFAYGaSLDRKLGIPGE-DNL----KGVYSAREF----V--EAIVIGNGNVALDIARILLQSPDKLSLTDITESAL 230
                  7*********5589999*****.333....445666665....3..379************99877666666555555555 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.039
                  E..EEESEEEE-S-EEES-HHCS.HCCT-EE.EETTEEE--TTSBE.......SSTTEEE-G CS
                  x..xxxxxxxxxxxxxxxxxxxx.xxxxxxx.xxxxxxxxxxxxxx.......xxxxxxxxx RF
  Pyr_redox_2 225 e..idadlvvvavGvrpstelle.eklglel.derggivvdeflrt.......nvpgiyaiG 275
                     i+ +  +++vG++p+    +  ++ +   d+ g i+ d f+r+        +pg+y +G
   KHJ32091.1 364 LidIKSSVALISVGYKPKALP-GfHDIRISFdDNLGIILNDTFGRVkhedsfeHIPGMYCAG 424
                  23488889999******9644.5788888884455666777777774444443366666666 PP

>> Asp_Glu_race  Asp/Glu/Hydantoin racemase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.7e-05      0.15      92     176 ..     219     298 ..     194     307 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.7e-05
                   SSEEEECHHHHHHHHHHHSS-EEEEEE-HHHHHCTHHHHHHHHHGT.EEE....T-CCCHHCCHCHHHHTT-TTSHHHHHHHHHH CS
  Asp_Glu_race  92 kiPvlgiveataealkatgvkkvglLgTrgtlksglyqkeleanqgievvvpseelqssvnqaiyeelkaGevteearrailkll 176
                   k+ +  i e ++e l++ ++k+v +Lg rg +++++  ke++++ +++ v      +  + ++ + e+  ++++ + rr+i++ll
    KHJ32091.1 219 KLSLTDITESALETLRKSKIKRVKILGRRGPVQAAFTIKEVRELINLSSV----TFHPILDSLLPNENTIEDLPRA-RRRIMELL 298
                   55689999*********************************998555222....2222233333334444444443.55555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 3792.16
//
Query:       KHJ32092.1  [L=407]
Description: hypothetical protein EV44_g4484 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0056   16.1   2.1     0.0056   16.1   2.1    1.8  2  DUF5560        Family of unknown function (DUF5560)
  ------ inclusion threshold ------
       0.85    9.7   6.2        1.1    9.3   0.4    2.2  2  Mito_fiss_reg  Mitochondrial fission regulator


Domain annotation for each model (and alignments):
>> DUF5560  Family of unknown function (DUF5560)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   2.1   6.3e-07    0.0056      37     142 ..      48     159 ..      28     175 .. 0.78
   2 ?   -5.0   2.5       1.9   1.7e+04      93     108 ..     300     315 ..     285     324 .. 0.61

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 6.3e-07
     DUF5560  37 apsgpggmalepppttlrkaflaqstllestlegapewaa....phpeeqrrsppacsqhtpplpstptgpppcspggnhplca.lsgrgggrcsipsl 130
                  psg   ++l pp       +     lle+t +  pe  +       + q   pp+ sq  p lp  p  p   +pg    +c+ l+ r  g  si   
  KHJ32092.1  48 NPSGSKNITLLPPHLWNLPYVTFSPELLEATTQHDPERVSqlfsSSNDPQTPNPPTSSQPRPYLPVQPITPYDGTPGNLRLFCSqLANRLQGNKSISEA 146
                 688999999988766544444445689*****99999875222156778999**************************999996589999999999765 PP

     DUF5560 131 s.ssstfslfssg 142
                    s t+  + +g
  KHJ32092.1 147 EkVSFTYQCLGTG 159
                 4145566666555 PP

  == domain 2  score: -5.0 bits;  conditional E-value: 1.9
     DUF5560  93 tpplpstptgpppcsp 108
                 t p ps    ppp  p
  KHJ32092.1 300 TNPTPSFRPFPPPTPP 315
                 4556666666666544 PP

>> Mito_fiss_reg  Mitochondrial fission regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.9    0.0099        89     152     190 ..      81     130 ..      68     158 .. 0.48
   2 ?    9.3   0.4   0.00012       1.1     158     216 ..     289     349 ..     269     363 .. 0.59

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.0099
  Mito_fiss_reg 152 lelsdtpdllepksssaspslepssslp.pppppppppi...........p 190
                     + +  ++l+++++ +++p+  p+ss+p p  p +p  +           +
     KHJ32092.1  81 HDPERVSQLFSSSNDPQTPNP-PTSSQPrPYLPVQPITPydgtpgnlrlfC 130
                    333444444444444444422.23333334444333333344444444443 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00012
  Mito_fiss_reg 158 pdllepksssaspslepssslppppppppppi..ppespsvldssnsaielikqrrgakkt 216
                     ++l+++s + + ++ +   +ppp pp+++p+  +++ +  +++  sa++l+  +r++  +
     KHJ32092.1 289 RTGLSRHSIPITNPTPSFRPFPPPTPPQLHPQvqSQHLNLPVSQGDSAMDLDSISRQKDAD 349
                    4444444555444442234477888889999544556667788888899988777763332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2970.93
//
Query:       KHJ32093.1  [L=1072]
Description: putative dna mismatch repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-22   80.2   0.1    5.7e-22   78.1   0.1    2.1  1  MutL_C          MutL C terminal dimerisation domain
      6e-19   67.9   0.0    1.7e-18   66.4   0.0    1.8  1  DNA_mis_repair  DNA mismatch repair protein, C-terminal domai
    1.3e-12   47.8   0.0    7.9e-12   45.2   0.0    2.4  2  HATPase_c_3     Histidine kinase-, DNA gyrase B-, and HSP90-l
    1.9e-06   28.3   0.0    7.3e-06   26.5   0.0    2.1  1  HATPase_c       Histidine kinase-, DNA gyrase B-, and HSP90-l


Domain annotation for each model (and alignments):
>> MutL_C  MutL C terminal dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.1   0.1   1.3e-25   5.7e-22       5     147 .]     834     998 ..     831     998 .. 0.90

  Alignments for each domain:
  == domain 1  score: 78.1 bits;  conditional E-value: 1.3e-25
                 EEEEETTTEEEEEE..............TTEEEEEEHHHHHHHHHHHHHHHHCCHSSB-EEEEEEEEEEE--HHHHHHHHHCHHHHHHCT-EEEE.... CS
      MutL_C   5 algqvhgtyilaen..............edglvlvDqhaAherilyeklkeqlkeeelksQpLliPlvlelspeeaalleehkeeLaklGfelee.... 85 
                 ++gq++ ++ila++               d+++++Dqha +e++++e+l++++     +sQ+L +P +l+l++ e++++ e+ ++L+++Gf ++     
  KHJ32093.1 834 IIGQFNLGFILASRsshnlhhsheelhnFDDIFIIDQHASDEKYNFERLQATTIV---QSQKLAVPKILDLTALEEEVIIENLKILQSNGFGVRVnqsd 929
                 6788888888887777777777776666899*******************88776...9********************************99988899 PP

                 ..-STTEEEEEEEECCCTTTSHHHHHHHHHHHHCCCSS....-H.-HCCHHHHHHHHCTTSSSSSS--- CS
      MutL_C  86 ..fgpnslivravPallrqqnleelirelleelaekgk....es.leekleellatmachssvkagrrl 147
                   + +n++ + + P+  + ++  ++++ell+ l+++      +   ++k+++++a++ac+ss+++g++l
  KHJ32093.1 930 naQVGNRCELISLPLSHETTFSLSDLEELLTLLTDHSPggsdTIpRPSKVRKMFAMRACRSSIMIGKTL 998
                 99999******************************999998633689******************9876 PP

>> DNA_mis_repair  DNA mismatch repair protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.4   0.0   3.7e-22   1.7e-18       6     118 ..     243     357 ..     238     358 .. 0.91

  Alignments for each domain:
  == domain 1  score: 66.4 bits;  conditional E-value: 3.7e-22
                     HHHHHCCEEEEE.EEETTEEEEEEEE-CCG-..BTTGGEEEEEETTEEE--HHHHHHHHHHHHCCSSSSSB-EEEEEEEESSGGEE-TSSTT--- CS
  DNA_mis_repair   6 gkevaenlleie.keeeqlkieGfiskpels..rskrdkqflfvNgRlvkskelkkaireaYkellpkgrypvvvLnleidpeevDvNvhPtKre 97 
                     g++  +++ ei    +++++i G is+p++   r+ +d+q++fvN+R+ + ++++k+ +e++k l+  ++ p+++ n+e+d++  DvNv P+Kr 
      KHJ32093.1 243 GHSKEQHMSEIGiGITKNIRIIGQISRPNVGdgRQVPDRQMFFVNSRPCSLPQVAKTFNEVFK-LITGSSNPFIFANFELDTRLYDVNVSPDKRT 336
                     666678888888888899**********976115669**************************.9****************************** PP

                     -EETTHHCHHHHHHHHHHHHH CS
  DNA_mis_repair  98 Vrfqdeeevieaieealkeal 118
                     + +++++ ++e+++++l ++l
      KHJ32093.1 337 ILLHNQDRILESLRSSLAKSL 357
                     ****************99987 PP

>> HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   0.0   1.8e-15   7.9e-12       5     107 ..      26     129 ..      22     149 .. 0.84
   2 ?   -4.0   0.0       2.7   1.2e+04      58      76 ..     238     256 ..     230     259 .. 0.77

  Alignments for each domain:
  == domain 1  score: 45.2 bits;  conditional E-value: 1.8e-15
  HATPase_c_3   5 kAlaelvdNsldAdaenvkievnknrgktgeivieDdGkGmseeelkn.alrlatsskeakrkstslGkkGi.GlklAslslgkkltvit.kkegess 99 
                  +++ elv+NsldA a++++i ++++    ++i ++D+G+G+s+++ +  al+  ts+ ++ ++  +l ++G+ G  l+sl  ++k++++t  +++   
   KHJ32093.1  26 SVVKELVENSLDAGATSIDIRFKNQG--LDSIEVQDNGNGISPQNYETiALKHYTSKLSKYSDLLTLKSFGFrGEALSSLCALAKVSIVTcMAQDAPK 121
                  689*********************74..79*****************999998888888778888888999889899999999999999944666666 PP

  HATPase_c_3 100 tltldvdk 107
                   ++l+ d+
   KHJ32093.1 122 GTKLEFDV 129
                  55555554 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 2.7
  HATPase_c_3  58 tsskeakrkstslGkkGiG 76 
                   ++++ ++k++ +++ GiG
   KHJ32093.1 238 AEAPNGHSKEQHMSEIGIG 256
                  5566667899999****99 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   1.6e-09   7.3e-06       5      64 ..      23      83 ..      19     151 .. 0.70

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 1.6e-09
                HHHHHHHHHHHHHHHHHSTTTEEEEEEEEEETEEEEEEEESSSSSTTHHHTGTCSTTCH....H CS
   HATPase_c  5 rLrqiisnlvdNavkfatkageieveikaseddlvisveDnGiGipkedlkklfekfsq....d 64
                 L  ++++lv+N++++   a++i+++ k +++  +i+v+DnG Gi++++ + +  k+++    +
  KHJ32093.1 23 DLCSVVKELVENSLDA--GATSIDIRFK-NQGLDSIEVQDNGNGISPQNYETIALKHYTsklsK 83
                6889***********6..7999******.66799*****************5555444434331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1072 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1275  (0.0711138); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.79u 0.31s 00:00:01.10 Elapsed: 00:00:00.49
# Mc/sec: 6604.74
//
Query:       KHJ32094.1  [L=797]
Description: putative vacuolar protein-sorting protein bro1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.5e-130  434.8   1.5   2.5e-130  434.8   1.5    1.8  2  BRO1            BRO1-like domain
    8.3e-66  222.3  22.1    8.3e-66  222.3  22.1    1.8  2  ALIX_LYPXL_bnd  ALIX V-shaped domain binding to HIV
  ------ inclusion threshold ------
       0.15   12.0   2.4       0.37   10.7   0.5    2.5  2  Phage_tail_APC  Phage tail assembly chaperone protein
        3.3    7.8  10.9        2.6    8.1   0.1    4.6  5  DUF1664         Protein of unknown function (DUF1664)


Domain annotation for each model (and alignments):
>> BRO1  BRO1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  434.8   1.5  5.6e-134  2.5e-130       1     389 []       5     392 ..       5     392 .. 0.96
   2 ?   -3.8   0.7      0.94   4.2e+03      22     315 ..     676     705 ..     652     710 .. 0.46

  Alignments for each domain:
  == domain 1  score: 434.8 bits;  conditional E-value: 5.6e-134
                 XXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXX.XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXX CS
        BRO1   1 llsiplKkteekevdlkkpLknyIsetygsqdpeafeddlaelnklRqdavrksankdsesglelllkYyaqLellelrfpieeqslkveFtWydafss 99 
                 ++s+plK t+e  +d+ +pLk+yI++tyg +dpe++++++a+ln+lRqd +r+ a+kds+sg++ll++Yy+qLell+lrfp++e+++k++FtW+daf+ 
  KHJ32094.1   5 MISVPLKATNE--IDWIQPLKQYIRQTYG-DDPERYAEECAALNRLRQD-MRG-AGKDSASGRDLLYRYYGQLELLDLRFPVDENHIKISFTWFDAFT- 97 
                 9********66..***************8.99*****************.556.89999***********************98899**********5. PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXX.XXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        BRO1 100 skkvtqsslafEkasvLFniaalysqlaasqnrstdeglkrackyfqqAAgvfqylkenflhapteeesedlspetlkaLeklmlAqAqecflekaikd 198
                 +k+++q sla+Ekas++Fni a++s+ aa+qnrs+d+glk+a+++fq++Ag+f+y++enflhap    s+dls++t+k+L+++mlAq qe+flek i d
  KHJ32094.1  98 QKPTSQFSLAYEKASIIFNISAVLSCHAAHQNRSEDAGLKMAYHSFQASAGMFTYINENFLHAP----STDLSRDTVKILTQIMLAQGQEVFLEKQIAD 192
                 99**************************************************************....****************************99* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....... CS
        BRO1 199 nkkdsliaKlaaqvaelYeealealkkselidekeevlkklldksWikhvqvKashfkAlaqyrqalaaeeakkyGeeiarlqkAlellkea....... 290
                 +kk +l+aKla+++  lY+++le          +e+v+k++++k W+ ++q+K+ ++++l+qy+qala+++a+ +G +i rlq A++++kea       
  KHJ32094.1 193 GKKVGLLAKLASHAGYLYTQVLEGT--------QENVNKAVFEKVWLLTLQIKSIYMTSLSQYYQALADDDANSHGVAISRLQVAETAAKEAnniahsf 283
                 *************************........77888889***************************************************9999999 PP

                 .........X...........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXHHHHHHH CS
        BRO1 291 .........lkskkaeelledlkglkdvveeklkeaekDNdlIYheevPsesslpeikkaslvkaipleeeke.eekseesgkdlFakLvPlsvheaas 379
                          l s+ a   +e +k+  ++++ekl+e+ kDNd+IYh++vP+e  l+ i k+ ++kaip++e ++ +++++++g+d+F+k+vP+sv+e+as
  KHJ32094.1 284 prtmpaisnLASETAAIFVEITKRNLSNIREKLSELIKDNDYIYHQTVPPEVGLTIIPKLPAAKAIPVSELYAgQDIQRITGPDIFQKIVPISVTESAS 382
                 999998887555555556**************************************************998888************************* PP

                 HHHHHHHHHH CS
        BRO1 380 ayserkaklv 389
                 +y+e+kakl+
  KHJ32094.1 383 LYDEEKAKLI 392
                 ********97 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 0.94
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXX.XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        BRO1  22 nyIsetygsqdpeafeddlaelnklRqdavrksankdsesglelllkYyaqLellelrfpieeqslkveFtWydafssskkvtqsslafEkasvLFnia 120
                 +++++                                                                                              
  KHJ32094.1 676 TLLQD---------------------------------------------------------------------------------------------- 680
                 22222.............................................................................................. PP

                 XXXXXXXXXX..XXX.XXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        BRO1 121 alysqlaasqnrstdeglkrackyfqqAAgvfqylkenflhapteeesedlspetlkaLeklmlAqAqecflekaikdnkkdsliaKlaaqvaelYeea 219
                                                                                                                    
  KHJ32094.1   - ---------------------------------------------------------------------------------------------------   -
                 ................................................................................................... PP

                 XXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...........XXXXXXXXXXXXX CS
        BRO1 220 lealkkselidekeevlkklldksWikhvqvKashfkAlaqyrqalaaeeakkyGeeiarlqkAlellkealkskkaeelledlkglkdvveeklk 315
                                                                                        ++ k++++  e l+++++++++k++
  KHJ32094.1 681 -----------------------------------------------------------------------KRVKAEQKKYETLSRQRSSIKSKYR 705
                 .......................................................................2233333334555555555555555 PP

>> ALIX_LYPXL_bnd  ALIX V-shaped domain binding to HIV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.3  22.1   1.9e-69   8.3e-66       3     295 .]     433     749 ..     431     749 .. 0.92
   2 ?   -3.7   0.0       1.3   5.7e+03      76      95 ..     752     771 ..     751     779 .. 0.72

  Alignments for each domain:
  == domain 1  score: 222.3 bits;  conditional E-value: 1.9e-69
  ALIX_LYPXL_bnd   3 PpsllekaeevrsqgglqrlekllqdlqelkerneeiLdeieklLdeEesedeklrakygtrWtrqpSseltaelraelqkyreileeAsesDki 97 
                     ++++ ++++e++   + +   + ++ l+++ke++  +Ld+ +++Ld Ees++ek+r+ky+++Wt+qpSs+lt +lr+++++yre+l  As+sD +
      KHJ32094.1 433 DDEFKRWCQEIS---NYDIPPSTFDHLKSSKESISCVLDKLTQQLDLEESVCEKMRSKYEADWTQQPSSRLTITLRSDIRSYREALLDASASDIK 524
                     67899*******...999999************************************************************************** PP

  ALIX_LYPXL_bnd  98 vrqklqenkedlelLsgpeeeleaalp.....ssssa...................aasesveeqirklrsllekldelkaereqllkdlkekae 168
                     ++ ++ +n+ d +++ +  + +ea +      s+++                    ++++s ++q+++++++l+kl+ +k+er+q+lkdlkek++
      KHJ32094.1 525 LQTRFCQNEVDYDEMRSAGQMDEADILfqkalSHAHGdkignvlqietslldedfsQDELSISDQVARIEDILKKLNLIKRERTQVLKDLKEKVH 619
                     ***************65455555554444555444448888888888887776665559************************************ PP

  ALIX_LYPXL_bnd 169 ndDitpklltekkrdiaanefealfeeelekydplqeqleqslakqeellkeiqeaneefeqskksdseq..s...qrqreevlqkleaaydkyk 258
                     ndDi+++l+++kk+ ++ n ++++f++elek++p+q++l ++++kq++l+ke++++ + ++q+k++++eq  +   +rqr+++ +k+ + y+++ 
      KHJ32094.1 620 NDDISQVLILNKKS-LS-NFENEIFQAELEKFKPHQSRLLSANHKQSSLMKELTSTLNTLLQDKRVKAEQkkYetlSRQRSSIKSKYRRLYQEFL 712
                     **************.66.6669************************************************863778******************* PP

  ALIX_LYPXL_bnd 259 elksnleeglkFYndltelleklqkkvkdfvfaRrtE 295
                     e ++++++++++Y  +++++++l k+v++fv++Rr+E
      KHJ32094.1 713 EYEAGIRSAQEWYRGMKDTVDSLGKNVEAFVNNRRSE 749
                     ***********************************99 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.3
  ALIX_LYPXL_bnd  76 elraelqkyreileeAsesD 95 
                     +l ++++++r+++ + ++ D
      KHJ32094.1 752 QLLTQIEQMRKNISSIQNMD 771
                     56777777777777777777 PP

>> Phage_tail_APC  Phage tail assembly chaperone protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.42   1.9e+03      31      42 ..     242     253 ..     233     254 .. 0.86
   2 ?   10.7   0.5   8.3e-05      0.37      14      42 ..     489     517 ..     487     522 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.42
                     HHHHHHHHHHHH CS
  Phage_tail_APC  31 qalkaYrqaLRD 42 
                     + l +Y qaL D
      KHJ32094.1 242 TSLSQYYQALAD 253
                     6799******98 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 8.3e-05
                     HTHHHHSTTS---HHHHHHHHHHHHHHHH CS
  Phage_tail_APC  14 asDwvqlpDspldeeerqalkaYrqaLRD 42 
                     ++Dw+q+p s+l+ + r+++++Yr aL D
      KHJ32094.1 489 EADWTQQPSSRLTITLRSDIRSYREALLD 517
                     68*************************87 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.076   3.4e+02      33      50 ..     303     320 ..     297     328 .. 0.82
   2 ?   -0.0   0.0      0.19   8.6e+02      55      88 ..     454     487 ..     449     495 .. 0.78
   3 ?   -1.1   0.2       0.4   1.8e+03      50      73 ..     593     616 ..     571     638 .. 0.54
   4 ?   -0.3   1.2      0.23     1e+03      28     107 ..     623     708 ..     621     723 .. 0.60
   5 ?    8.1   0.1   0.00058       2.6      37      81 ..     726     770 ..     724     781 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.076
     DUF1664  33 fvTkrslsdavesvskql 50 
                  +Tkr+ls+  e++s+ +
  KHJ32094.1 303 EITKRNLSNIREKLSELI 320
                 579999999999998765 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.19
     DUF1664  55 eslaatkrhLssridrvdkkldeqkeiskeikee 88 
                 ++l++ k+ +s  +d++ ++ld  + + ++++++
  KHJ32094.1 454 DHLKSSKESISCVLDKLTQQLDLEESVCEKMRSK 487
                 5677888888888888888888888887777765 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.4
     DUF1664  50 leqvseslaatkrhLssridrvdk 73 
                 +e++ ++l+  kr+ ++ ++ + +
  KHJ32094.1 593 IEDILKKLNLIKRERTQVLKDLKE 616
                 222222222222222222222222 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 0.23
     DUF1664  28 lsdlmfvTkrslsdavesv.skqleqvs...eslaatkrhLssridrvdkklde..qkeiskeikeevtevredlseigedvesvk 107
                 +s ++   k+sls++ +++   +le+++   + l ++ ++ ss ++++ ++l+   q +  k+ +++ ++++++ s+i+++ + + 
  KHJ32094.1 623 ISQVLILNKKSLSNFENEIfQAELEKFKphqSRLLSANHKQSSLMKELTSTLNTllQDKRVKAEQKKYETLSRQRSSIKSKYRRLY 708
                 57788888999999988873457888765555565555555555555555555411223334445566666666666666666555 PP

  == domain 5  score: 8.1 bits;  conditional E-value: 0.00058
     DUF1664  37 rslsdavesvskqleqvseslaatkrhLssridrvdkkldeqkei 81 
                 r+++d v+s++k++e + ++ ++   +L  +i+++ k++ + +++
  KHJ32094.1 726 RGMKDTVDSLGKNVEAFVNNRRSEGAQLLTQIEQMRKNISSIQNM 770
                 89**********************************999887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (797 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1503  (0.0838307); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.68u 0.32s 00:00:01.00 Elapsed: 00:00:00.48
# Mc/sec: 5022.22
//
Query:       KHJ32095.1  [L=533]
Description: putative mitochondrial chaperone [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.6e-38  129.7   0.0    1.2e-37  129.3   0.0    1.2  1  DnaJ_C          DnaJ C terminal domain
    1.7e-20   72.9   0.3    3.1e-20   72.1   0.3    1.4  1  DnaJ            DnaJ domain
    9.1e-10   38.8  20.9    2.1e-09   37.6  20.9    1.7  1  DnaJ_CXXCXGXG   DnaJ central domain
  ------ inclusion threshold ------
        2.2    8.3   8.0         18    5.4   8.1    2.2  1  HypA            Hydrogenase/urease nickel incorporation, meta


Domain annotation for each model (and alignments):
>> DnaJ_C  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.3   0.0   2.6e-41   1.2e-37       1     148 []     226     452 ..     226     452 .. 0.96

  Alignments for each domain:
  == domain 1  score: 129.3 bits;  conditional E-value: 2.6e-41
                 EEEEEEE-HHHHHH-.EEE.EEEE........................................................................TEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx.................................................................xxxxxxx RF
      DnaJ_C   1 ieveleisleelykGktkkikikrnvi.................................................................kkekktl 34 
                 iev+++is+ e++kG++kki+i+   +                                                                 ++++k++
  KHJ32095.1 226 IEVRMSISFLEAAKGTSKKITINPLATcktcsgsglksgsqrskckscdgtgtrvhfvsggfqmastcqtcggqgitipkggecrtcsgagaTRQRKSI 324
                 799*******************9988899**************************************************************9888889* PP

                 EEEE-TT--TT-EEEETT-SS........SS.....S---EEEEEEE---SS-EEETTEEEEEEEEEHHHHHHTEEEEEE-SS-EEEEEE...--TT-E CS
                 xxxxxxxxxxxxxxxxxxxxx........xxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxx RF
      DnaJ_C  35 evkipaGikdgqkirlegeGd........eeg...gepGDlivtikvkphpvFkrkgndlyveveislaeallGgklevptldgkvklki...tqpgev 119
                 +++ipaG++dg+++r++geGd        +       pGDl+v ++v+p+++Fkr g d++++++i+l++allGg++ vptl+g+vk+k+   t++g++
  KHJ32095.1 325 DIDIPAGVEDGMRLRIDGEGDapmtgtasN-SnlrSLPGDLYVLVSVAPDSKFKRAGADVLYTAKIPLTTALLGGEIYVPTLSGEVKVKVatgTSTGDK 422
                 **********************99887652.257999************************9************************************* PP

                 EEETT-S-EET....TEE--EEEEEEEE-- CS
                 xxxxxxxxxxxx.xxxxxxxxxxxxxxxxx RF
      DnaJ_C 120 lrikgkGmpklk.kpgkrGdlyvevkvefP 148
                 + + g Gm+k + ++g++Gdl ve+kv++P
  KHJ32095.1 423 INLTGYGMKKIDeRRGSYGDLKVEFKVDIP 452
                 **********998999************99 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.1   0.3   6.9e-24   3.1e-20       1      63 []      79     140 ..      79     140 .. 0.97

  Alignments for each domain:
  == domain 1  score: 72.1 bits;  conditional E-value: 6.9e-24
                 HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ   1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63 
                 d+Y +Lgvsk as++eIkkaY+ la+kyHPD + k+ +a++kF e + Aye L+dp+k++++D
  KHJ32095.1  79 DPYIVLGVSKGASASEIKKAYYGLAKKYHPDTS-KEANAKDKFAEAQSAYELLCDPQKKAAWD 140
                 78*******************************.8899**********************998 PP

>> DnaJ_CXXCXGXG  DnaJ central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6  20.9   4.6e-13   2.1e-09       1      67 []     253     316 ..     253     316 .. 0.82

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 4.6e-13
  DnaJ_CXXCXGXG   1 CkkCkGsgakkgk.kktCktCkGsGvvreeqktlgpfvqqsqstCpeCeGtGkvikekdkCkkCkGkg 67 
                    Ck+C+Gsg k+g+ +++Ck+C+G+G+ ++     g f  q+ stC++C+G+G +i +  +C++C+G g
     KHJ32095.1 253 CKTCSGSGLKSGSqRSKCKSCDGTGTRVHFV--SGGF--QMASTCQTCGGQGITIPKGGECRTCSGAG 316
                    *********99665889********533333..2233..4689************9999*******86 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   8.1    0.0041        18      67     106 ..     264     310 ..     227     314 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0041
                 E--EEEETTTS-EEECHHHHH.........S-TTTSSS-EEEEESSSEE CS
        HypA  67 vpvkvrCreCgkefeleekal.........rCpkCgsadveivsGeell 106
                  + + +C++C+ +++  +  +         +C++Cg+++++i +G e++
  KHJ32095.1 264 GSQRSKCKSCDGTGTRVH--FvsggfqmasTCQTCGGQGITIPKGGECR 310
                 445678888887777554..1234455566***************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       656  (0.0365888); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 3897.26
//
Query:       KHJ32096.1  [L=529]
Description: hypothetical protein EV44_g0746 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (529 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       681  (0.0379832); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3764.54
//
Query:       KHJ32097.1  [L=377]
Description: putative electron transfer flavoprotein subunit alpha protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-43  147.0   0.1    8.4e-43  146.4   0.1    1.3  1  ETF         Electron transfer flavoprotein domain
    9.4e-33  112.1   0.3      2e-32  111.0   0.3    1.6  1  ETF_alpha   Electron transfer flavoprotein FAD-binding domain
  ------ inclusion threshold ------
       0.12   12.8   0.1        8.5    6.9   0.0    2.4  2  PSII_Pbs31  Photosystem II Psb31 protein


Domain annotation for each model (and alignments):
>> ETF  Electron transfer flavoprotein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.4   0.1   1.4e-46   8.4e-43       2     176 ..      64     228 ..      63     234 .. 0.93

  Alignments for each domain:
  == domain 1  score: 146.4 bits;  conditional E-value: 1.4e-46
                 EEEE-EC.CCCE-HHHHHHHHHHHHHHHHHT--EEEEEEES....S-CHHHHHHCT-SEEEEEE-GGGSS--CCHHHHHHHHHHHHC--SEEEEESSCC CS
         ETF   2 lvlaehgvdgklnpvdlealeaArrlkekaggevtavvvGppeaeealrealaamGadkvilvddpalagydaeatakalaalikkedpdlvlagatai 100
                 l + e++ dgkln++ l a++aA +l    gg+vt++v+G + +e a +e    +G+ k+++vd+pa++  ++e  a++l + ikk ++++v+ag+ta+
  KHJ32097.1  64 LAVLEQK-DGKLNQNALRAITAAQQL----GGPVTGIVAGGNIQELA-KEISEIQGIQKILVVDNPAYEKGLPEFFAPLLIENIKKGGYSHVFAGHTAF 156
                 6788997.******************....9**********655555.889999********************************************* PP

                 HHHHHHHHHHHCT-EEEEEESEEEEETCCEEEEEECCCCTEEEEEE-TSSSEEEEE-TTSS----S-TT---EEEE CS
         ETF 101 gkqvaprlAalLgvplitdvteleveggkltvtRpieggnglaevveadlpavltvrpgafepaaimaakkkevee 176
                 gk v+pr+AalL+v++i+d+t++  e +  t++Rpi++gn++++++++d+++++tvr +af+pa++ + +++ +e 
  KHJ32097.1 157 GKSVMPRVAALLDVSQISDITAIINE-N--TFVRPIYAGNIISTMESLDKVKIITVRGTAFQPAET-QGGSASIEA 228
                 **********************9999.7..*********************************765.448888775 PP

>> ETF_alpha  Electron transfer flavoprotein FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.0   0.3   3.4e-36     2e-32       2      84 .]     252     335 ..     251     335 .. 0.97

  Alignments for each domain:
  == domain 1  score: 111.0 bits;  conditional E-value: 3.4e-36
                 -TTT-S-EEEE-GGGSSGGGHH.HHHHHHHHHT-EEEE-HHHHTTTSS-CCCB-SSSS-----S-EEEES----HHHHGGGTT- CS
   ETF_alpha   2 dLeeakvvvsgGrGlkskenle.lleelaealgaavgasRavvdagwipeerqvGqtGktvaPklyiavGisGaiqhlaGmkes 84 
                 +L++a +vvsgGrGlkske+++ ++  la+algaa+gasRa+vd+g+++++ qvGqtGk+vaP+ly+++GisGaiqhlaGmk+s
  KHJ32097.1 252 NLSSAGRVVSGGRGLKSKEGFDrVILPLADALGAAIGASRAAVDSGYADNSLQVGQTGKVVAPQLYFCIGISGAIQHLAGMKDS 335
                 799******************7699*********************************************************97 PP

>> PSII_Pbs31  Photosystem II Psb31 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0    0.0014       8.5      17      69 ..     163     215 ..     155     229 .. 0.81
   2 ?    3.3   0.0     0.019   1.1e+02      26      59 ..     304     337 ..     296     355 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0014
  PSII_Pbs31  17 RiarLksAvekGdfaavveeknaftLFnsGayksaadKakkkeavaltkeile 69 
                 R+a+L + ++  d+ a+++e+  ++   +G + s+ +   k ++++   ++++
  KHJ32097.1 163 RVAALLDVSQISDITAIINENTFVRPIYAGNIISTMESLDKVKIITVRGTAFQ 215
                 9*******************999998999998777776666666666666665 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.019
  PSII_Pbs31  26 ekGdfaavveeknaftLFnsGayksaadKakkke 59 
                 + G +++vv+ +  f + +sGa++  a  + +k 
  KHJ32097.1 304 QVGQTGKVVAPQLYFCIGISGAIQHLAGMKDSKI 337
                 5699*******************55443333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       357  (0.0199119); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2808.67
//
Query:       KHJ32098.1  [L=912]
Description: putative aaa family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-17   64.3   0.0    3.2e-17   63.2   0.0    1.6  1  AAA         ATPase family associated with various cellular ac
    0.00089   19.5   1.4      0.062   13.6   0.1    2.9  2  AAA_22      AAA domain
     0.0009   19.7   0.2     0.0035   17.8   0.2    2.0  1  AAA_16      AAA ATPase domain
      0.001   18.7  34.5      0.001   18.7  34.5    2.7  3  SR-25       Nuclear RNA-splicing-associated protein
     0.0031   17.7   0.0     0.0088   16.2   0.0    1.8  1  AAA_33      AAA domain
     0.0037   17.3   0.0     0.0095   15.9   0.0    1.7  1  AAA_5       AAA domain (dynein-related subfamily)
     0.0068   16.2   0.0      0.017   14.9   0.0    1.6  1  AAA_30      AAA domain
  ------ inclusion threshold ------
      0.053   13.3   0.0      0.053   13.3   0.0    3.7  2  AAA_11      AAA domain
       0.17   11.5   0.0       0.32   10.5   0.0    1.4  1  AAA_25      AAA domain
       0.34   11.2   1.5        1.6    9.1   1.5    2.1  1  AAA_19      AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.2   0.0   1.8e-20   3.2e-17       2     128 ..     695     811 ..     694     815 .. 0.92

  Alignments for each domain:
  == domain 1  score: 63.2 bits;  conditional E-value: 1.8e-20
                 EEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTSS CS
         AAA   2 llyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkke 100
                 +l+GppGtGKTl+a+ +a+ l+ +++++s+ +l  +     e++++ +++ a +     +l++DE+d + ++r + ++ +++ +v+ +l+ l+ ++   
  KHJ32098.1 695 VLHGPPGTGKTLTAEGIAELLKYPLYTVSAGDLG-HDATRLERQLQTILDMAYSWG--AVLLLDEADVFLEKR-NMADIHRNALVSIFLRLLEYFQG-- 787
                 69********************************.557888999999999988776..9**************.778999999************99.. PP

                 STEEEEEEESSGGGSTHHHHSTTSSEEE CS
         AAA 101 skvivigatnrpdkldpallrgRfdrki 128
                    i+ ++tnr++++d+a++ +R+ + +
  KHJ32098.1 788 ---ILFLTTNRVETFDEAFR-SRIHVAL 811
                 ...99***************.9*98765 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.1   3.5e-05     0.062       6      29 ..     692     715 ..     686     724 .. 0.85
   2 ?    3.9   0.1     0.032        58      73     112 ..     729     769 ..     711     789 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.5e-05
      AAA_22   6 gilvvtGesGtGKTtllrrlleql 29 
                  + v++G++GtGKT++++ ++e l
  KHJ32098.1 692 LVAVLHGPPGTGKTLTAEGIAELL 715
                 6789*************9888876 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.032
      AAA_22  73 lsseellealeqalrarav.ielliiDEaqh.lrseealeeL 112
                 ++  +l ++l+  l+ ++   ++l++DEa+  l +++++ ++
  KHJ32098.1 729 HDATRLERQLQTILDMAYSwGAVLLLDEADVfL-EKRNMADI 769
                 5566666777777777777999********966.66666665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.2   1.9e-06    0.0035      19     126 ..     684     831 ..     678     846 .. 0.70

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.9e-06
      AAA_16  19 vrsgrp..elvllsGesGvGKsslvrellralekd..............................ggiflrgkcdql..esa...ipy....salaqal 76 
                 v +g +   + +l+G++G+GK+  ++ +++ l+                                g+++l  ++d +  +++   i++    s+++++l
  KHJ32098.1 684 VIRGKGkgLVAVLHGPPGTGKTLTAEGIAELLKYPlytvsagdlghdatrlerqlqtildmayswGAVLLLDEADVFleKRNmadIHRnalvSIFLRLL 782
                 555555558999*****************9888887777788888888888888888888777776666777777775522233322233336677777 PP

      AAA_16  77 areellrqlldeaesaeleawrekleealaavpelagaeasrllellkrl 126
                 +  + +  l ++  ++  ea+r +++ al+  +el+++++++++  + + 
  KHJ32098.1 783 EYFQGILFLTTNRVETFDEAFRSRIHVALR-YQELSSKARQSVFKIFLDR 831
                 777777777777777788888888888887.7777777776666665554 PP

>> SR-25  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7  34.5   5.8e-07     0.001      29     120 ..      37     126 ..       3     167 .. 0.45
   2 ?   -3.0   4.8       2.6   4.6e+03     109     125 ..     317     333 ..     308     351 .. 0.47
   3 ?   -3.0   0.2       2.6   4.7e+03     120     153 ..     581     616 ..     552     617 .. 0.55

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 5.8e-07
       SR-25  29 rsssasksqsrkassasekeeerskekkkkkrrrssssssssssssssss..ssssssssddrkkrgkkkdkkkkkkkkkkkkkkekkkakeka 120
                 +s   sk++sr+++s + k++e+   +  kk+r   ssss+ss ss +ss  ss ss ssdd + + kkk+ k+   +k ++k +ekk++k+k+
  KHJ32098.1  37 KSKNGSKTESRNTKSCTGKKKEKV--QV-KKSRDIVSSSSESSDSSAESSsdSSDSSESSDDSEDEVKKKKDKSGCLSK-RNKSNEKKRTKKKK 126
                 333334444444433333332222..22.23333333333333333333301333444444444443333333332222.23333333333211 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.6
       SR-25 109 kkkekkkakekakaeaa 125
                  k +kk++k+++k++++
  KHJ32098.1 317 LKILKKRGKKTNKKAQK 333
                 33333333332222221 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 2.6
       SR-25 120 akaeaaaaealpgpsldqwqk..eaeeedGPvltDe 153
                 +  ++++ e++p  + d++ k  ++e+ + P++tDe
  KHJ32098.1 581 EISKTKELEKIPNKTSDEIGKfgSDETSEIPIFTDE 616
                 233445556666666565555333444456777776 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   4.9e-06    0.0088       1      98 [.     693     834 ..     693     878 .. 0.65

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 4.9e-06
      AAA_33   1 lvllvGlpGsGKstlaerllkklgavllssdt.....................................lrrrlfgtdqqskt..............dy 48 
                 + +l+G+pG+GK+  ae++++ l++ l +  +                                     ++r+++                      +y
  KHJ32098.1 693 VAVLHGPPGTGKTLTAEGIAELLKYPLYTVSAgdlghdatrlerqlqtildmayswgavllldeadvflEKRNMA-------DihrnalvsiflrllEY 784
                 6789****************9999555544444466666666666666666666666666666666655333333.......03333444566666644 PP

      AAA_33  49 tr.vldrlyqilnelarkalsagrnvildatnlsrrerarflklarrlgvp 98 
                  + +l+ +++++ e++++a +++++v l+   ls ++r+ ++k++ +  ++
  KHJ32098.1 785 FQgILFLTTNRV-ETFDEAFRSRIHVALRYQELSSKARQSVFKIFLDRAAA 834
                 444889999998.99999999999999998888888888888888654443 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   5.3e-06    0.0095       3      31 ..     695     723 ..     694     758 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 5.3e-06
                 EEE--SSSSHHHHHHHGGGGBS--EEEEE CS
       AAA_5   3 lLvGppGtgKselaerlaaalnreveyvq 31 
                 +L GppGtgK+  ae +a++l+ ++ +v 
  KHJ32098.1 695 VLHGPPGTGKTLTAEGIAELLKYPLYTVS 723
                 699********************999885 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   9.3e-06     0.017      17      63 ..     690     735 ..     683     775 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 9.3e-06
      AAA_30  17 gdrvavltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLa 63 
                 + +vavl+Gp+GtGKt + ++++e+++   ++v  +   g  A +L+
  KHJ32098.1 690 KGLVAVLHGPPGTGKTLTAEGIAELLKYPLYTV-SAGDLGHDATRLE 735
                 45799*******************998554443.3444455555555 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -16.8  26.2        10   1.8e+04     116     189 ..      56     128 ..      17     279 .. 0.72
   2 ?   13.3   0.0   2.9e-05     0.053      14      41 ..     685     715 ..     666     751 .. 0.69

  Alignments for each domain:
  == domain 1  score: -16.8 bits;  conditional E-value: 10
      AAA_11 116 rlekeekaqlakeiskeleklakelrafeeeeekeklkkskekskskleqerrklkkerkelskeleeaeesle 189
                 ++ ++ +++++++i +++ + +++  ++++++++ ++   +++++ k++++++ + ++r++ +++ ++++++ e
  KHJ32098.1  56 KK-EKVQVKKSRDIVSSSSESSDSSAESSSDSSDSSESSDDSEDEVKKKKDKSGCLSKRNKSNEKKRTKKKKPE 128
                 11.11133444444444444444443333443334444444444444444444444444444444444444444 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 2.9e-05
      AAA_11  14 lsese...itliqGPPGtgKTktivellsql 41 
                 ++ ++   +++++GPPGtgKT t  ++ + l
  KHJ32098.1 685 IRGKGkglVAVLHGPPGTGKTLTAEGIAELL 715
                 44443667899**********7766665554 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00018      0.32      10      50 ..     669     708 ..     660     712 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00018
      AAA_25  10 vsvadlaapppprrwlvkgllpagelallaGapgtGKttla 50 
                 ++ ++ ++p +  +++++g   +g +a+l G+pgtGKt  a
  KHJ32098.1 669 LVESQKNSPTKNIDDVIRGK-GKGLVAVLHGPPGTGKTLTA 708
                 44455566888899999999.89***************866 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   1.5   0.00087       1.6      11      35 ..     692     716 ..     683     899 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00087
      AAA_19  11 kvllvtaGpGtGKTrvlkhivallv 35 
                  v ++ ++pGtGKT + ++i +ll+
  KHJ32098.1 692 LVAVLHGPPGTGKTLTAEGIAELLK 716
                 578899***********99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (912 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2099  (0.117073); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                       110  (0.00613531); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.99u 0.30s 00:00:01.29 Elapsed: 00:00:00.48
# Mc/sec: 5686.38
//
Query:       KHJ32099.1  [L=1029]
Description: putative importin-beta domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-08   33.0   1.7    1.1e-07   31.7   0.2    2.7  3  IBN_N     Importin-beta N-terminal domain
    9.3e-08   32.3   2.1     0.0002   21.4   0.1    4.9  5  Xpo1      Exportin 1-like protein
  ------ inclusion threshold ------
      0.095   13.0   0.0        6.1    7.2   0.0    3.0  2  TAF6_C    TAF6 C-terminal HEAT repeat domain
       0.12   12.7   0.0        2.3    8.7   0.0    3.1  2  HEAT      HEAT repeat
       0.22   11.5   0.6        4.6    7.2   0.1    3.5  4  DUF3437   Domain of unknown function (DUF3437)


Domain annotation for each model (and alignments):
>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   0.2     3e-11   1.1e-07       1      71 [.      27     104 ..      27     107 .. 0.93
   2 ?   -3.8   0.0       3.5   1.2e+04      18      40 ..     184     206 ..     179     207 .. 0.73
   3 ?   -2.6   0.1       1.5   5.3e+03       2      15 ..     353     367 ..     353     369 .. 0.76

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 3e-11
                 HHHHHHHHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHC.......GSXHHHHHHHHHHHHHH CS
       IBN_N   1 AekqLkqlekqpgflsallqilanseselevRqlAalyLknlitkhWsdeeekq.......slpseekeqIrnnllnl 71 
                 Ae++L ++e +p + ++l+ i+++s+ +le Rq+A+l+ +  ++k+W+++++ +        l +  keq+rn+ l+l
  KHJ32099.1  27 AEQHLSRAERNPAYPVSLMAIASHSNVTLENRQSALLLTRTWVEKYWNPTDQEGatsldlvILNDVSKEQMRNTMLKL 104
                 8***********************************************77777788999999999999*****99987 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 3.5
                 HHHHHHCTTSHHHHHHHHHHHHH CS
       IBN_N  18 llqilanseselevRqlAalyLk 40 
                 ++ ++ +++ ++ +R lA+ +L+
  KHJ32099.1 184 VYDVAISEDRKPVLRALAIAILR 206
                 56677776666699999998886 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 1.5
                 HHHHHHHHC.STCHH CS
       IBN_N   2 ekqLkqlek.qpgfl 15 
                 e qL+q++k ++  +
  KHJ32099.1 353 EHQLQQFSKiSESVW 367
                 679*****9666655 PP

>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.1   5.7e-08    0.0002       3      58 ..     113     169 ..     111     188 .. 0.92
   2 ?   -1.9   0.0      0.87   3.1e+03     101     141 ..     447     488 ..     419     497 .. 0.75
   3 ?    3.7   0.1     0.017        60      84     144 ..     515     573 ..     483     577 .. 0.73
   4 ?    1.5   0.0      0.08   2.9e+02      84     136 ..     626     676 ..     610     685 .. 0.73
   5 ?   -0.8   0.0      0.41   1.5e+03      44      74 ..     988    1020 ..     962    1027 .. 0.73

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 5.7e-08
                 HHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCT..HHHHHHHHHHHHHHHHHHHT CS
        Xpo1   3 flrnklaealaelflqeypnnWpsffddllsllss.spsglelllriLkvlpeEiad 58 
                  +rn  + ++++++++++p++Wp++++++l+l+ + s+++l+  l++L+ l e++ +
  KHJ32099.1 113 KIRNVASYVVTKIAINDFPHQWPNLLSTILHLIPNaSDQQLNGPLKVLSDLVEDVLT 169
                 699999***************************9978999**************985 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.87
                 HHHHHHHHHHHHHHTT.TS-HHHHHTSCHHHHHHHHCCSCCC CS
        Xpo1 101 selveavLkclsswvs.widiglivnnpllnllfqlLsdpel 141
                  ++ e++L  l++ ++  id+g  v ++++ ++f l+++  +
  KHJ32099.1 447 WRMRESALYLLTQLLNdFIDVGEKVTPEIIGVCFGLIEYAIS 488
                 678888999999999988999999999999999998866555 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.017
                 HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTTS-HHHHHTSC..HHHHHHHHCCSCCCHHH CS
        Xpo1  84 lelllqileqsqskkqsselveavLkclsswvswidiglivnnp..llnllfqlLsdpelrea 144
                 l+ll++ +++ +s+ +s+ +  +++k ++ wv+  ++    +++  ++n++ ++L +++l e 
  KHJ32099.1 515 LDLLSRTIKSINSD-ESEVVKVSCIKSIQGWVKDRSVA---EHQlpIINAVSEYLYSKDLTEL 573
                 56777777777776.46666677777777777765554...4333499999999988888765 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.08
                 HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTTS-HHHHHT.SCHHHHHHHHC CS
        Xpo1  84 lelllqileqsqskkqsselveavLkclsswvswidiglivn.npllnllfqlL 136
                  e +++i+++ + +   +  ++ +Lk+l s    +dig +   +pl++l+ +lL
  KHJ32099.1 626 TETFEDIVKKFSGT---DLFTQLCLKVLPSLTGAFDIGNMTGdSPLVELATELL 676
                 44555555555543...6778888999999999999988887677888888887 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 0.41
                  HHHHHHHHHHHHHHTSHT..TTSCHHHHHHHHH CS
        Xpo1   44 lllriLkvlpeEiadfsr..skleqerrndlkd 74  
                  l+  +L+++ e i+dfs+  + l++e++ +lk+
  KHJ32099.1  988 LIEFFLRAFRENIGDFSNwyTALKAEEQIKLKE 1020
                  33358999*******998888888888777776 PP

>> TAF6_C  TAF6 C-terminal HEAT repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0     0.069   2.5e+02      15      54 ..     107     147 ..      61     160 .. 0.82
   2 ?    7.2   0.0    0.0017       6.1      14      53 ..     441     480 ..     393     503 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.069
      TAF6_C  15 eledhwaLRdfAAslLaki.lkkysssyktLkprvtrtllk 54 
                 + e + ++R+ A+ ++ ki ++ ++++ ++L + ++ ++ +
  KHJ32099.1 107 SEESDRKIRNVASYVVTKIaINDFPHQWPNLLSTILHLIPN 147
                 4455689***********94589********9999987755 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0017
      TAF6_C  14 seledhwaLRdfAAslLakilkkysssyktLkprvtrtll 53 
                 s+++ +w++R+ A  lL ++l+ + +  ++++p+++ ++ 
  KHJ32099.1 441 SASDSTWRMRESALYLLTQLLNDFIDVGEKVTPEIIGVCF 480
                 78999**********************9999999998886 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0   0.00063       2.3       4      28 ..     437     461 ..     434     464 .. 0.83
   2 ?   -0.4   0.0      0.53   1.9e+03       7      25 ..     523     542 ..     517     546 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00063
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                  ll   sD+ ++ Re+A++ L++l+
  KHJ32099.1 437 QLLFSASDSTWRMRESALYLLTQLL 461
                 5556679***************997 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.53
                 HHH.T-SSHHHHHHHHHHHH CS
        HEAT   7 kll.sDpspeVReaAakaLg 25 
                 k + sD+s  V  +++k++ 
  KHJ32099.1 523 KSInSDESEVVKVSCIKSIQ 542
                 55648899999999999885 PP

>> DUF3437  Domain of unknown function (DUF3437)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.6   5.9e+03      24      50 ..      95     121 ..      91     126 .. 0.80
   2 ?   -2.5   0.0       1.4     5e+03      14      34 ..     126     146 ..     113     154 .. 0.72
   3 ?    7.2   0.1    0.0013       4.6      19      76 ..     325     403 ..     322     412 .. 0.73
   4 ?   -1.6   0.0      0.71   2.5e+03      24      54 ..     602     632 ..     582     639 .. 0.65

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.6
     DUF3437  24 kwlpevleeLaraardpapirktvkkt 50 
                 + + +++ +La+ ++++ +ir+ ++ +
  KHJ32099.1  95 EQMRNTMLKLATSEESDRKIRNVASYV 121
                 568899999999999988999887655 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.4
     DUF3437  14 lvlafpydvPkwlpevleeLa 34 
                  ++ fp++ P+ l  +l  + 
  KHJ32099.1 126 AINDFPHQWPNLLSTILHLIP 146
                 577899999999988876554 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0013
     DUF3437  19 pydvPkwlpevleeLaraardpapirktvkktlseFkrthq......................DtWeedkkkFteeqled 76 
                 py++   + e l  L ++ + p+ ++k+ ++ l++F +  +                      D W+ d + F  e++++
  KHJ32099.1 325 PYTLDFLVLEELDFLQSCLKAPP-VQKELEHQLQQFSKISEsvwvldvmklavyyaqitkeeeDLWDIDVNLFLAEEISA 403
                 78888888888999999999876.*****************666666666666666666666666666666666666655 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 0.71
     DUF3437  24 kwlpevleeLaraardpapirktvkktlseF 54 
                 + + ++l +La++ + + ++   v++t+++ 
  KHJ32099.1 602 SPVLDLLFQLAKHGAANFQMTMLVTETFEDI 632
                 5577899999998877666666666666553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1029 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.77u 0.27s 00:00:01.04 Elapsed: 00:00:00.45
# Mc/sec: 6945.62
//
Query:       KHJ32100.1  [L=190]
Description: hypothetical protein EV44_g5031 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1381.72
//
Query:       KHJ32101.1  [L=338]
Description: hypothetical protein EV44_g6052 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.089   13.0   9.4      0.048   13.8   5.1    2.2  2  Fib_alpha  Fibrinogen alpha/beta chain family
       0.13   12.6   6.0       0.25   11.6   6.0    1.4  1  KLRAQ      Predicted coiled-coil domain-containing protein
       0.88    9.8   6.5       0.44   10.8   3.4    2.2  2  XhlA       Haemolysin XhlA


Domain annotation for each model (and alignments):
>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   5.1   8.1e-06     0.048      29      83 ..      17      71 ..       9      95 .. 0.78
   2 ?    0.8   0.1     0.085   5.1e+02      89     128 ..     252     293 ..     241     298 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 8.1e-06
                CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha 29 yekdvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikkss 83
                 + +++ ++ek+e++l++i+ +++++e++v +i+++l+++ ++++d ++  +ks 
  KHJ32101.1 17 GHVNTNGRIEKIEQRLDKIETRNTNIEKIVIQIQKTLNSQLRNQEDPKEPKEKSV 71
                5668899*********************************999987533333332 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.085
                 CCCHHHHHHHCCHHHHHHH..HHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  89 eilrlketidaqesnirvL..qnvlesneqkiqkLeqdidqk 128
                   + lke i ++  +i  L  qn+ +sn+ +i ++ ++++++
  KHJ32101.1 252 TRELLKELIMNHLPRIWTLtyQNIKSSNNYEIIEMAVQMASQ 293
                 556789999999999998877899999999999998888776 PP

>> KLRAQ  Predicted coiled-coil domain-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   6.0   4.2e-05      0.25      40      96 ..      23      80 ..       5      85 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4.2e-05
       KLRAQ 40 qslrkseqEvdsLtFrNkqLekrvellqeeleveekk.vksksknkseaqkkeeeksv 96
                  + k+eq +d ++ rN  +ek v ++q+ l+++ ++  + k+ +++++qk+e+++s+
  KHJ32101.1 23 GRIEKIEQRLDKIETRNTNIEKIVIQIQKTLNSQLRNqEDPKEPKEKSVQKEEKSESI 80
                5799****************************99966233455566666666666655 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       1.4   8.2e+03       9      20 ..       3      14 ..       2      16 .. 0.66
   2 ?   10.8   3.4   7.4e-05      0.44       9      43 ..      21      55 ..      19      61 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.4
        XhlA  9 ietkldnleerv 20
                i+t+ ++le+++
  KHJ32101.1  3 IDTRFKTLEKTI 14
                677777777754 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 7.4e-05
        XhlA  9 ietkldnleervdkleekaaeaeekiknleedlkk 43
                ++++++++e+r+dk+e ++++ e+ +++++++l++
  KHJ32101.1 21 TNGRIEKIEQRLDKIETRNTNIEKIVIQIQKTLNS 55
                57899*************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2018  (0.112555); expected 358.6 (0.02)
Passed bias filter:                      845  (0.0471303); expected 358.6 (0.02)
Passed Vit filter:                        87  (0.00485247); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 2358.05
//
Query:       KHJ32102.1  [L=818]
Description: putative cytosolic phospholipase a2 zeta [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-28  100.0   0.0    3.2e-28   98.4   0.0    1.7  1  PLA2_B    Lysophospholipase catalytic domain


Domain annotation for each model (and alignments):
>> PLA2_B  Lysophospholipase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.4   0.0   1.8e-32   3.2e-28       1     348 [.     244     611 ..     244     619 .. 0.73

  Alignments for each domain:
  == domain 1  score: 98.4 bits;  conditional E-value: 1.8e-32
      PLA2_B   1 iaiavSGGGyramltgaGvlkAldsRtdnatglgGlLqsatYlaGlsGgsWlvgslavNnftsvqelskkkeddsvweleksilnpeglelvknikryd 99 
                 ia+++SGGG+ra++ gaG ++A +        + GlL++ tY aG+sG+ Wl +    N     q+++k  ++++  +  +    pe l++++++   +
  KHJ32102.1 244 IAMIGSGGGLRALVAGAGSMHAAE--------EDGLLDCVTYTAGVSGSCWLQALF--NSSLGDQSFKKVINHIKSRTGIHIAYPPEALKVLNTAPTNK 332
                 8999*******************9........89******************8766..77777777777544555555455555577777777665555 PP

      PLA2_B 100 eivdevek..KkdagfnvsltDiwGralseklve....aeeggvnltlsslkdaekfqeaemplPiivadgrk..................pgetvinl 174
                  +     +  K+d + +  l Di+G +l+ +l+     +  ++++l+ s+      ++++++p+Pi ++   +                  ++e+v + 
  KHJ32102.1 333 YLLSGFIEklKSDPNSDFGLVDIYGLLLGARLLVpkgeLAVNEIDLKISNQ--RRYIEQGQYPMPIYTVVRHHipisedstssgnidrepsENEKVKAK 429
                 45555444024455667789********99987522112334444455544..4889*********987766669999999999999997633333332 PP

      PLA2_B 175 Na...tvfEfsPyelgswdaklnsFvpveylGtklsnGt...vvkkgkcvagf...dnaGflmgtsstlFnevlleinsts...mlesllkellkkllk 261
                      ++fE+sP+e+    ++l++ +p+  +G ++++G+   ++++g  v++      +G++++++ +   +  +ei+      +  s l e+++   +
  KHJ32102.1 430 KEawfQWFEISPFEMF--CEELGAGIPTWAMGRRFKQGRdlpITQDGLYVPELrlpILFGIFGSAFCATLAHYYREIKPLFksfVGFSSLDEIIQGRNE 526
                 22233799******96..9*******************8443345565555541115688888877776666666655433233455777788888888 PP

      PLA2_B 262 dlsedsedisqyapnpfkdaeee.nqnatqsivesktLdlvdggedgqniplvpllqkerevdvifaldnsadteeswpdgvslvaty 348
                 dls+ +    +y pn f++++   +++atq+i++ k+L+l+d g   +n+p+ pll++ r++++++a+d+sa+ ++   +  s+v+ y
  KHJ32102.1 527 DLSKVHPIDPAYIPNYFYKMDVNlSETATQEISNLKNLQLMDAGMS-NNLPVYPLLRPGRDLEILIAFDSSAEIKT--DNWLSVVDGY 611
                 88887765566778***9998554889999**************86.69***********************8776..3344555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (818 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       786  (0.0438396); expected 358.6 (0.02)
Passed bias filter:                      594  (0.0331307); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.28s 00:00:01.01 Elapsed: 00:00:00.45
# Mc/sec: 5410.96
//
Query:       KHJ32103.1  [L=109]
Description: putative acyl binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-18   66.4   0.1    2.3e-18   66.2   0.1    1.1  1  ACBP      Acyl CoA binding protein


Domain annotation for each model (and alignments):
>> ACBP  Acyl CoA binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.2   0.1   1.3e-22   2.3e-18       4      83 ..      14      92 ..      11      94 .. 0.85

  Alignments for each domain:
  == domain 1  score: 66.2 bits;  conditional E-value: 1.3e-22
                HHHHHHHH.H...HSTS---HHHHHHHHHHHHHHHTSS--S---..-TTSHHHHHHHHHHHH..TTT--HHHHHHHHHHHHHHH CS
        ACBP  4 FekavaavkklekklkkkpsneeklelYglyKqateGdvntsrP..saldfkgkaKwdaWka..lkglskeeAkkkYiellkel 83
                F+ a+++  +   kl++kp+ +e+lelY+lyK at  d++ ++P  +++d+kgk K +aW+a   +g+++e+Ak++Yi+l+++ 
  KHJ32103.1 14 FAIAADDS-T---KLTEKPNSDELLELYSLYKIATGEDIT-KAPevGMFDLKGKSKRKAWQAkvDTGITPEDAKAAYIALVENF 92
                66666666.4...57889*********************5.54446****************5559***************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 843.76
//
Query:       KHJ32104.1  [L=719]
Description: putative thioredoxin-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.3e-48  160.8   0.2    4.5e-26   90.8   0.0    4.6  3  Thioredoxin    Thioredoxin
      3e-13   50.1   0.0    1.6e-06   28.2   0.0    4.0  4  Thioredoxin_6  Thioredoxin-like domain
    1.1e-07   32.3   1.1      0.075   13.5   0.0    4.2  3  Thioredoxin_2  Thioredoxin-like domain
    8.5e-07   29.2   0.1       0.13   12.6   0.0    3.8  3  Thioredoxin_8  Thioredoxin-like
     0.0017   18.3   0.5       0.82    9.6   0.1    3.1  3  AhpC-TSA       AhpC/TSA family
     0.0033   17.6   0.9       0.38   11.0   0.0    3.3  4  Thioredoxin_7  Thioredoxin-like
  ------ inclusion threshold ------
      0.016   15.1   0.0        8.6    6.4   0.0    3.3  3  HyaE           Hydrogenase-1 expression protein HyaE
      0.017   14.9   0.0        1.3    8.8   0.0    2.6  2  TraF           F plasmid transfer operon protein
      0.075   12.8   4.7        4.5    7.0   0.0    3.7  4  Thioredoxin_9  Thioredoxin


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.0   0.2   7.5e-19   1.5e-15      11     102 ..      60     173 ..      51     174 .. 0.92
   2 !   90.8   0.0   2.3e-29   4.5e-26       3     101 ..     268     365 ..     266     367 .. 0.93
   3 ?    4.3   0.0      0.02        40      53      83 ..     420     450 ..     374     470 .. 0.70

  Alignments for each domain:
  == domain 1  score: 57.0 bits;  conditional E-value: 7.5e-19
                  HHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTT........................TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEE CS
  Thioredoxin  11 eeevakekklvlveFyApwCghCkalaPeleklaeelkd........................kvklakvdvdenedlakkyevegiPtlklfkngke 84 
                  ++++++   +++++ y+pwC+hC+a+aP++++l e +                          ++ +  +++d+  + + + +v+++Pt+++fkngke
   KHJ32104.1  60 RNTIQD--GNWFIKHYSPWCPHCRAMAPVWQTLYEFYYTsnptessssismesssmsnfttyyNFHFGSLNCDAYGSACIENKVKAYPTFIIFKNGKE 155
                  455555..99************************998777899999**************************************************** PP

                  EEEEESS-HHHHHHHHHH CS
  Thioredoxin  85 vkkyegarekeklaaflk 102
                   +++eg+re + l +f++
   KHJ32104.1 156 TDRIEGSREMKILSDFIE 173
                  *********999999987 PP

  == domain 2  score: 90.8 bits;  conditional E-value: 2.3e-29
                  EESSHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEESS-HHHHHHHH CS
  Thioredoxin   3 lvltkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkkyegarekeklaaf 100
                  ++lt+e+F++ev  +++++l++FyApwCghC+a+aP +++la+e+k+++ + +v++d ++ l+k+++  g+Pt+++f+ g+   +y+g r   +l+++
   KHJ32104.1 268 ISLTTEKFQSEVTMSRDQWLIKFYAPWCGHCQAMAPNWTQLAKEMKGRLNIGEVNCDIEKRLCKDVQLGGYPTILFFRGGE-RVEYNGLRGLGDLVTY 364
                  57899************************************************************************9999.6689999988888876 PP

                  H CS
  Thioredoxin 101 l 101
                   
   KHJ32104.1 365 A 365
                  5 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.02
                  EEEEETTTSHHHHHHTT-SSSSEEEEEETTE CS
  Thioredoxin  53 lakvdvdenedlakkyevegiPtlklfkngk 83 
                   ak+  +++++l+++++++  P l++ ++g+
   KHJ32104.1 420 HAKLVKTNSKELVDRFKITTWPRLLVSRDGR 450
                  455556778889************9999998 PP

>> Thioredoxin_6  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.11   2.3e+02      33      74 ..     135     175 ..     110     177 .. 0.75
   2 !   12.5   0.0   5.2e-05       0.1      13     120 ..     306     413 ..     299     419 .. 0.80
   3 !   28.2   0.0   8.1e-10   1.6e-06      26     131 ..     424     531 ..     416     552 .. 0.81
   4 ?    2.1   0.0     0.082   1.6e+02     110     159 ..     559     610 ..     550     625 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.11
                    HHHHTT--S.SEEEEEETTTTEEEEEETHT--HHHHHHHHHHH CS
  Thioredoxin_6  33 vadklgvke.pavllfrkfdeekvkydgekitvddlkkfiekn 74 
                    ++ + +vk  p+ ++f++  +e+  ++g+  + + l++fie++
     KHJ32104.1 135 ACIENKVKAyPTFIIFKN-GKETDRIEGS-REMKILSDFIESQ 175
                    45556777779*******.7778999998.899*******976 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 5.2e-05
                    HHHTTT-T.TSEEEEE-...-HHHHHHTT--S.SEEEEEETTTTEEEEEETHT--HHHHHHHHHHH---S..EEE-SHHHHHHHHTSS--EEEEEE CS
  Thioredoxin_6  13 ekvakelkgdvrfgvtk...skevadklgvke.pavllfrkfdeekvkydgekitvddlkkfieknslpl..vreltpenaeelfeeglppllllf 102
                     + ake+kg +  g ++   +k +++++++ + p++l+fr+   e+v+y+g      dl++  +k++     v  +++e+++el +++  +++++f
     KHJ32104.1 306 TQLAKEMKGRLNIGEVNcdiEKRLCKDVQLGGyPTILFFRG--GERVEYNGL-RGLGDLVTYANKAIEAGegVKDINEEQFKELEKTE-EVIFVYF 397
                    566777777777777762224559999999999********..4579****9.79************98777***********98888.8899999 PP

                    E-TTSTTHHHHHHHHHHH CS
  Thioredoxin_6 103 lkkddeeteklkkaiekv 120
                    ++  +  t++  +a+e++
     KHJ32104.1 398 YD--QATTSEDFAALERL 413
                    95..56666666666665 PP

  == domain 3  score: 28.2 bits;  conditional E-value: 8.1e-10
                    EEE--HHHHHHTT--S.SEEEEEETTTTEEEEEETH.....T--HHHHHHHHHHH---SEEE-SHHHHHHHHTSS--EEEEEEE-TTSTTHHHHHH CS
  Thioredoxin_6  26 gvtkskevadklgvke.pavllfrkfdeekvkydge.....kitvddlkkfieknslplvreltpenaeelfeeglppllllflkkddeeteklkk 115
                    + t+ske++d +++++ p +l+ r+    ++ y+ +     + ++  + +++ +  lp v+elt  na+e+++ +l  +l+++++++++e   +kk
     KHJ32104.1 424 VKTNSKELVDRFKITTwPRLLVSRD--GRPT-YYTAlspqeMRDFRRILHWMHSVWLPIVPELTASNAKEIMNGKLV-VLAILTRERPDEFLMAKK 515
                    56899****************9998..3333.44444777899****************************999955.777777788999989999 PP

                    HHHHHHHHTTTT-EEE CS
  Thioredoxin_6 116 aiekvakefkdkinfa 131
                    +++++a e  dk ++a
     KHJ32104.1 516 ELKNAALEWMDKQTIA 531
                    9999888876665554 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.082
                    HHHHHHHHHHHHHHTTTT-EEEEEETTGGHHHHH.HTT--G.GG-SEEEEEE CS
  Thioredoxin_6 110 teklkkaiekvakefkdkinfaladaksfkrple.ylglss.sdlPvivivd 159
                     + +k++  +  k++++++ fa++d+  ++r ++  +g+    d+ +i+i d
     KHJ32104.1 559 LRSAKNIRINMDKSEQKEVGFAWVDGVFWERWIRqTYGIEVgKDGEKIIIND 610
                    5566666677889999***********9999776577777655555555555 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.0   3.8e-05     0.075      13      99 ..      73     162 ..      68     172 .. 0.76
   2 !    7.6   0.0    0.0026       5.1       9      92 ..     287     351 ..     282     360 .. 0.74
   3 !    6.5   0.0    0.0056        11      35     100 ..     380     457 ..     364     465 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.8e-05
  Thioredoxin_2  13 tdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkd..........ieenvelarkygvrgtPt.ivfldgkeivarlp 97 
                    ++p+Cp C+++  + ++l  ++++     ++++  + + +i+ + +   +f++           +++     + +v++ Pt i+f +gk + +r++
     KHJ32104.1  73 YSPWCPHCRAMAPVWQTL--YEFY-----YTSNPTESSSSISMESSSMSNFTTyynfhfgslnCDAYGSACIENKVKAYPTfIIFKNGK-ETDRIE 160
                    58***********99999..7777.....555555666666666666666777777788878777777777777*******77799999.999999 PP

  Thioredoxin_2  98 Gy 99 
                    G 
     KHJ32104.1 161 GS 162
                    96 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0026
  Thioredoxin_2   9 lvvftdpdCpyCkklkkelkel.ddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtivfldgk..ei 92 
                    l+ f++p+C+ C+++  +  +l ++ + r             + ++ c+ ek            l + +++ g Pti+f+ g    +
     KHJ32104.1 287 LIKFYAPWCGHCQAMAPNWTQLaKEMKGR-----------LNIGEVNCDIEKR-----------LCKDVQLGGYPTILFFRGGerVE 351
                    6779999******9999888874555544...........5677888888886...........99999999999988887773433 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0056
  Thioredoxin_2  35 vrvllfp.lkpsfepkavaiwcakekkkafkd...............ieenvelarkygvrgtPt.ivfldgkeivarlpGyv 100
                    +    f+ l++  e ++v ++ ++  +++f +               ++ ++el+++++++  P  +v  dg+    ++  ++
     KHJ32104.1 380 EE--QFKeLEKTEEVIFVYFYDQATTSEDFAAlerltlslighaklvKTNSKELVDRFKITTWPRlLVSRDGR---PTYYTAL 457
                    44..45567777888888888888888777778899999999999999999**************888****9...2334444 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.1    0.0026       5.2       9      90 ..      73     151 ..      69     156 .. 0.63
   2 !   12.6   0.0   6.6e-05      0.13       5      47 ..     287     327 ..     284     335 .. 0.87
   3 ?    4.4   0.0     0.023        46      28      88 ..     381     445 ..     370     450 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0026
                    --SSSHHHHHHHHHHHHHHHHHHH.TTSEEEEEEE-SS-HHHHHHHGGGS-TTSEE.EE-TT-HHHHTT-S--TT-SEEEEE- CS
  Thioredoxin_8   9 gaswcppckaftpklkelyeklkk.kkkveivyvsldkkeeefekylkknkkpwlsvpfddkkrnklkkkynvkaiPtlvvld 90 
                    ++ wcp+c+a+ p  + lye +   ++     ++s+ ++  ++ ++++    ++++   + +     + + +vka+Pt+++ +
     KHJ32104.1  73 YSPWCPHCRAMAPVWQTLYEFYYTsNPTESSSSISMESS--SMSNFTTYY--NFHFGSLNCDAYGSACIENKVKAYPTFIIFK 151
                    689***********9999999976666666667777665..555555555..3333333333333334445777777776665 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 6.6e-05
                    EEEE--SSSHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SS-H CS
  Thioredoxin_8   5 lLyfgaswcppckaftpklkelyeklkkkkkveivyvsldkke 47 
                    l+ f+a wc +c+a+ p+ ++l +++k   +++i  v++d ++
     KHJ32104.1 287 LIKFYAPWCGHCQAMAPNWTQLAKEMK--GRLNIGEVNCDIEK 327
                    689***********************9..99999888888654 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.023
                    HHHHH.TTSEEEEEEE-SS-HHHHHHHGGGS-T...TSEE.EE-TT-HHHHTT-S--TT-SEEEE CS
  Thioredoxin_8  28 eklkk.kkkveivyvsldkkeeefekylkknkk...pwlsvpfddkkrnklkkkynvkaiPtlvv 88 
                    e++k+ +k  e+++v +  +    e++ +  +       +    + ++++l ++++++ +P+l+v
     KHJ32104.1 381 EQFKElEKTEEVIFVYFYDQATTSEDFAALERLtlsLIGHAKLVKTNSKELVDRFKITTWPRLLV 445
                    5666677888888888877666666666555331112223334455689*************876 PP

>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.0    0.0091        18      13      53 ..      54      92 ..      45     153 .. 0.84
   2 !    9.6   0.1   0.00041      0.82      27      68 ..     285     324 ..     267     335 .. 0.78
   3 ?   -1.5   0.0       1.1   2.2e+03      66      89 ..     376     399 ..     319     419 .. 0.59

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0091
                TTCEEEECHHHTTSEEEEEEESTST-CCHHHHHHHHHHCHH CS
    AhpC-TSA 13 adgetvslsdykgkpvvlffypkdwcpvCttelpalaklye 53
                 +g++v+ +   g    +  y+  wcp+C++ +p  + lye
  KHJ32104.1 54 LEGKKVRNTIQDG-NWFIKHYSP-WCPHCRAMAPVWQTLYE 92
                5677777444455.667899999.********999998887 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00041
                 EEEEEEESTST-CCHHHHHHHHHHCHHHCCCTTEEEEEEESS CS
    AhpC-TSA  27 pvvlffypkdwcpvCttelpalaklyeefkergvevigvsvd 68 
                   ++ fy+  wc +C++ +p+  +l++e+k   +++  v++d
  KHJ32104.1 285 QWLIKFYAP-WCGHCQAMAPNWTQLAKEMKG-RLNIGEVNCD 324
                 45799****.******************994.4666666665 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.1
                 ESSSCHHHHHHHHH-H.SSEEEE- CS
    AhpC-TSA  66 svdspeshkkfiekeslnfpllsD 89 
                  + ++e+ k+  ++e++ f +++D
  KHJ32104.1 376 KDINEEQFKELEKTEEVIFVYFYD 399
                 444444445555555555555555 PP

>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1     0.051     1e+02      21      35 ..      69      83 ..      64      88 .. 0.85
   2 !   11.0   0.0   0.00019      0.38      20      46 ..     286     313 ..     277     346 .. 0.61
   3 ?   -3.2   0.0       4.8   9.7e+03       7      27 ..     380     402 ..     377     416 .. 0.66
   4 ?   -2.4   0.0       2.8   5.6e+03      42      64 ..     485     507 ..     483     515 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.051
                   EEEE--TT-HHHHHH CS
  Thioredoxin_7 21 lvffgaswcftCqal 35
                   ++ + + wc++C+a+
     KHJ32104.1 69 FIKHYSPWCPHCRAM 83
                   6788999*****998 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00019
                    EEEEE--TT-HHHHHHHHH.HHH-HHHH CS
  Thioredoxin_7  20 vlvffgaswcftCqalerd.flsdeevk 46 
                     l+ f a wc++Cqa++ + +  ++e+k
     KHJ32104.1 286 WLIKFYAPWCGHCQAMAPNwTQLAKEMK 313
                    5899***********9654144444444 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 4.8
                    HHHHHHHHHHT--EEEEE..--T CS
  Thioredoxin_7   7 dealakaaergkpvlvff..gas 27 
                    +e + ++++++  ++v+f  +a+
     KHJ32104.1 380 EEQFKELEKTEEVIFVYFydQAT 402
                    56667788888888888844444 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 2.8
                    -HHHHH.HHHT-EEEEESS--S- CS
  Thioredoxin_7  42 deevkaalaekfvllrvdvterd 64 
                    + + k+++++k v+l +   er 
     KHJ32104.1 485 ASNAKEIMNGKLVVLAILTRERP 507
                    56789999999999998776655 PP

>> HyaE  Hydrogenase-1 expression protein HyaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.45   9.1e+02      80     101 ..     140     161 ..     133     166 .. 0.83
   2 ?    3.8   0.0     0.028        56      55      96 ..     310     350 ..     305     360 .. 0.79
   3 ?    6.4   0.0    0.0043       8.6      70      94 ..     426     450 ..     417     461 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.45
                 T-TSSSEEEEEETTEEEEEEES CS
        HyaE  80 gvlktPsllflrdgeylgvlak 101
                 +v+ +P+++++++g+    +++
  KHJ32104.1 140 KVKAYPTFIIFKNGKETDRIEG 161
                 6899*********998777766 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.028
                 CT-TTS-EEEEEETHHHHHHHHHCCT-TSSSEEEEEETTEEE CS
        HyaE  55 kaFpnalraavvadreqeealaerfgvlktPsllflrdgeyl 96 
                 k+ + +l++  v+  + e++l +  ++  +P++lf+r+ge +
  KHJ32104.1 310 KEMKGRLNIGEVN-CDIEKRLCKDVQLGGYPTILFFRGGERV 350
                 5555666666666.7889999999**************9865 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0043
                 HHHHHHHHCCT-TSSSEEEEEETTE CS
        HyaE  70 eqeealaerfgvlktPsllflrdge 94 
                  ++++l +rf+++ +P ll+ rdg+
  KHJ32104.1 426 TNSKELVDRFKITTWPRLLVSRDGR 450
                 67999*****************997 PP

>> TraF  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.038        75     136     156 ..      72      92 ..      57      96 .. 0.83
   2 ?    8.8   0.0   0.00063       1.3     131     159 ..     285     313 ..     272     329 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.038
        TraF 136 Fyrgkcpyceaqapilqafad 156
                  y++ cp c+a+ap+ q + +
  KHJ32104.1  72 HYSPWCPHCRAMAPVWQTLYE 92 
                 58899**********998865 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00063
        TraF 131 ygLlfFyrgkcpyceaqapilqafadkyg 159
                   L+ Fy++ c+ c+a+ap   ++a++++
  KHJ32104.1 285 QWLIKFYAPWCGHCQAMAPNWTQLAKEMK 313
                 55999********************9984 PP

>> Thioredoxin_9  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0    0.0099        20      35      68 ..      58      92 ..      37      96 .. 0.77
   2 ?   -2.4   0.0       1.9   3.7e+03      93     108 ..     139     154 ..     135     159 .. 0.80
   3 ?    7.0   0.0    0.0023       4.5      26      70 ..     268     312 ..     256     345 .. 0.75
   4 ?   -1.1   0.3      0.77   1.5e+03       8      35 ..     547     574 ..     541     582 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0099
                   HHHT--S-EEEEE.E--TT-HHHHHHHHHHHHHHH CS
  Thioredoxin_9 35 kiksiekklkilv.ltedwCgDaavnvPvlakiae 68
                   k+++  ++ ++++    +wC+ ++++ Pv + + e
     KHJ32104.1 58 KVRNTIQDGNWFIkHYSPWCPHCRAMAPVWQTLYE 92
                   555555566666623579***********988765 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.9
                    -SS--SSEEEEE-TT- CS
  Thioredoxin_9  93 ngaraiPtliildeeg 108
                    n+ +a Pt+ii++++ 
     KHJ32104.1 139 NKVKAYPTFIIFKNGK 154
                    678999*****98764 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0023
                    HHHH---HHHHHT--S-EEEEEE--TT-HHHHHHHHHHHHHHHH- CS
  Thioredoxin_9  26 velseeteekiksiekklkilvltedwCgDaavnvPvlakiaeln 70 
                    ++l++e+ + +   ++++ ++ + ++wCg ++++ P   ++a++ 
     KHJ32104.1 268 ISLTTEKFQSEVTMSRDQWLIKFYAPWCGHCQAMAPNWTQLAKEM 312
                    555555556555666666666699************998888764 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 0.77
                    HHTS-HHHHHHHHHHHHHHHHH---HHH CS
  Thioredoxin_9   8 leemtkenkermlrvykkvelseeteek 35 
                    +ee++++n++r lr  k+++++ +++e+
     KHJ32104.1 547 IEEAEDRNDQRALRSAKNIRINMDKSEQ 574
                    6888999999*******99999888774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (719 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.63u 0.24s 00:00:00.87 Elapsed: 00:00:00.40
# Mc/sec: 5337.35
//
Query:       KHJ32105.1  [L=136]
Description: putative histone H3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      4e-52  176.0   2.5    4.5e-52  175.9   2.5    1.0  1  Histone        Core histone H2A/H2B/H3/H4
      6e-06   26.6   0.0      9e-06   26.0   0.0    1.2  1  CENP-S         CENP-S protein
      4e-05   24.2   1.2    4.7e-05   24.0   1.2    1.2  1  PAF            PCNA-associated factor histone like domain
    4.3e-05   23.6   0.4    7.4e-05   22.8   0.1    1.6  2  CENP-T_C       Centromere kinetochore component CENP-T histon
     0.0038   17.5   0.4     0.0065   16.7   0.0    1.5  2  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
  ------ inclusion threshold ------
      0.026   14.6   0.2      0.042   13.9   0.0    1.5  2  TFIID-31kDa    Transcription initiation factor IID, 31kD subu


Domain annotation for each model (and alignments):
>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.9   2.5   1.5e-55   4.5e-52       1     131 []       1     132 [.       1     132 [. 0.99

  Alignments for each domain:
  == domain 1  score: 175.9 bits;  conditional E-value: 1.5e-55
                 XXEESXEEEXXXXEEXXXXXXXXXXHT.TS-SSSSB--TTT-XTTHHHHHHHHHHHHXXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHH CS
     Histone   1 marekekarkesektapekkvsakker.kasskskkkkkrryrpgtvalkeirkyqkstdlliqklpfaRvvreivksekedlrisaeavlalqealEa 98 
                 mar+k++ark+++++ap+k++++k +r +a+s+   kk++ry+pgtval+eir+yqkst+lli+klpf+R+vrei +++k+dlr++++a+ alqe +Ea
  KHJ32105.1   1 MARTKQTARKSTGGKAPRKQLASKAARkSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEA 99 
                 9************************************************************************************************** PP

                 HHHHHHHHHHHHHHHTTXSEEXHHHHHHHHHHT CS
     Histone  99 llvelfeeAnllakhaKRvTitpkDiqlArrlr 131
                 +lv+lfe++nl+a+haKRvTi++kDiqlArrlr
  KHJ32105.1 100 YLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLR 132
                 *******************************97 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0     3e-09     9e-06      13      71 ..      70     130 ..      65     133 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 3e-09
      CENP-S  13 kiveeeaa..ekeveatkqfiaaltelvykqlenlakDLeaFakHAkRstittdDvlLlaR 71 
                 ++v+e+a+  ++++++ +++i+al e v + l +l +D ++ a HAkR ti+ +D+ L  R
  KHJ32105.1  70 RLVREIAQdfKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARR 130
                 4555544423677789999*************************************99766 PP

>> PAF  PCNA-associated factor histone like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   1.2   1.6e-08   4.7e-05       1      62 [.       1      58 [.       1      82 [. 0.90

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 1.6e-08
         PAF  1 mVRTkAdvssarkavaakAprkslgassssssssssspkkkkkkyvGGNpvcpRptPaWQKp 62
                m RTk ++   rk  ++kAprk+l+++   +s+ s++  kk + y +G  v  R++   QK 
  KHJ32105.1  1 MARTKQTA---RKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPG-TVALREIRRYQKS 58
                99******...****************999999999988888888888.6888999999986 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.4   7.3e+03      14      25 ..      19      30 ..      14      39 .. 0.59
   2 !   22.8   0.1   2.5e-08   7.4e-05      11      76 ..      70     130 ..      58     135 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.4
    CENP-T_C 14 kklakrfakasg 25
                k+la+++a++s+
  KHJ32105.1 19 KQLASKAARKSA 30
                445555555544 PP

  == domain 2  score: 22.8 bits;  conditional E-value: 2.5e-08
    CENP-T_C  11 avvkklakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkr 76 
                  +v+ +a++f     s  + + +a+ al+++ + ++  + eD +  a Ha+R ti+++D+ l  +r
  KHJ32105.1  70 RLVREIAQDF----KSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQL-ARR 130
                 3455566666....5679*****************************************864.444 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       4.8   1.4e+04      39      46 ..      20      27 ..      19      29 .. 0.58
   2 !   16.7   0.0   2.2e-06    0.0065       2      64 ..      65     128 ..      64     128 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 4.8
                   HHHHHHHH CS
  CBFD_NFYB_HMF 39 elaseAae 46
                   +las+Aa+
     KHJ32105.1 20 QLASKAAR 27
                   46666664 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 2.2e-06
                    XXXHHHHHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF   2 eLPiarvkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklA 64 
                    +LP  r  + + +d +++ ++ ++A   ++e+ve ++ +l + ++  + ++kr ti+ ++i+lA
     KHJ32105.1  65 KLPFQRLVREIAQDfKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLA 128
                    78999988878888899********************************************998 PP

>> TFIID-31kDa  Transcription initiation factor IID, 31kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       2.5   7.6e+03      73      90 ..      10      27 ..       4      31 .. 0.63
   2 ?   13.9   0.0   1.4e-05     0.042      23      67 ..      85     129 ..      68     136 .] 0.85

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 2.5
  TFIID-31kDa 73 kqfkepppkelLlelAae 90
                 k+  ++ p++ L + Aa+
   KHJ32105.1 10 KSTGGKAPRKQLASKAAR 27
                 455556777777776654 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 1.4e-05
  TFIID-31kDa  23 yeerVvlqLldfayrytssvLedAkvlaehakkkevslddvrlAi 67 
                  +++  +  L + +  y +s++ed +++a hak+ +++ +d++lA 
   KHJ32105.1  85 FQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLAR 129
                  67777888999999*****************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1026.99
//
Query:       KHJ32106.1  [L=390]
Description: putative tyrosyl-dna phosphodiesterase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   3.8e-121  404.9   0.2   4.3e-121  404.8   0.2    1.0  1  Tyr-DNA_phospho  Tyrosyl-DNA phosphodiesterase


Domain annotation for each model (and alignments):
>> Tyr-DNA_phospho  Tyrosyl-DNA phosphodiesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  404.8   0.2  2.4e-125  4.3e-121      95     423 ..       1     362 [.       1     363 [. 0.92

  Alignments for each domain:
  == domain 1  score: 404.8 bits;  conditional E-value: 2.4e-125
                      --.TT--B---EEEEEETTSEEEEEEESS-BSHHHHHSSB-EEEE---EEE...........S--SS--HHHHHHHHHHHTT..-....HHHHT CS
  Tyr-DNA_phospho  95 mpepfgthHsKmmilfyeddslrvvihtaNlieaDwgnmtqgvwrspllpl....le.sskeseeesgtrFkrdLleYLkaygkk....klkkl 179
                      mpe+fgthHsKm++lf++d++++++ihtaN++e Dw+nmtqg+wrspll++    ++ +s ++++++g++Fk dLl+YLkay++k    +++ l
       KHJ32106.1   1 MPEMFGTHHSKMFVLFRHDETAQIIIHTANITEFDWTNMTQGLWRSPLLKKlsknSPeTSVSNDHSDGSKFKLDLLNYLKAYDNKsrkkICEGL 94 
                      9**************************************************9987556778889999*****************9999999999 PP

                      HHHHHTEE-GGGT-EEEEE---TTS--.......HHHHHHHHHHHTCT..T----EEEEEEE-SBB---S-.SSS---HHHHTHHHHHTTSS-- CS
  Tyr-DNA_phospho 180 ieklkkyDfsevrvaliaSvPgrhkgs...ktkwGlakLkkalkelplekeekskeleivaqvSSigslgstekwlknefleslspalqgkdks 270
                       +kl+ yDfs++r+al+aSvPg+h ++    t wG+a+L+++l+++++  ++ s++ ei++qvSSi++lg+t++wl+++f+++l++ +      
       KHJ32106.1  95 SKKLEPYDFSSIRAALVASVPGKHVIHglsRTLWGWARLQDILRSVDV--KNCSSKPEIIIQVSSIATLGTTNEWLEKTFFKALKSVK------ 180
                      9***********************************************..4455579****************************999...... PP

                      -HHHHHTEEEE..EE--BSGGGTTSTTGGGGGGG-B---...SGGHHHHHHHTS--EEEE-TT.............TTTTT--B--EEEEEE-- CS
  Tyr-DNA_phospho 271 keeeekkskpkfkiifPtveevrrsldgyasggsihfkiqsaqqqkqleelkpylckwkqdse...........eeagRkraapHiKtyirfss 353
                      +++++k ++p+fk+ifPt +e+rrsl+gy+sg++ih+ki++ +qqkq+++lkp+lc w++d +           ++agRkraapHiKtyirfs+
       KHJ32106.1 181 NDSKDKVTEPEFKVIFPTNDEIRRSLNGYDSGNAIHIKIHTPAQQKQMQYLKPLLCCWAGDGTtprelasnsrnSDAGRKRAAPHIKTYIRFSD 274
                      222356689***************************************************9999**********99****************99 PP

                      STTSEESEEEEES--BSHHHH--S.....SS--SSBEEEEEEEGG............................------SEEESS-SSEEE- CS
  Tyr-DNA_phospho 354 ktlkkidWalltSaNLSkqAWGelekakeelrirsyElGVlvlpk.............kdlpee.........eektevgvrvPydlplepY 423
                       + ++idW+lltSaNLS+qAWG+  +a++  ri+syE+GVlv+p+                  +         +++ ++g+r+Py lp+ +Y
       KHJ32106.1 275 SKKETIDWVLLTSANLSRQAWGDSINAAGIQRICSYEIGVLVWPSlygtrakfvptfqI----DkpslnvdqeNNEIVIGIRMPYGLPVISY 362
                      999******************************************88877666655550....15555666669999************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3063.04
//
Query:       KHJ32107.1  [L=400]
Description: putative phosphoinositide 3-phosphate phosphatase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.2e-09   36.3   0.0    8.5e-09   35.3   0.0    1.4  1  DSPc             Dual specificity phosphatase, catalytic doma
    4.1e-06   26.5   0.3    7.4e-06   25.7   0.0    1.5  2  Y_phosphatase    Protein-tyrosine phosphatase
  ------ inclusion threshold ------
      0.023   14.6   0.0      0.037   14.0   0.0    1.2  1  Y_phosphatase3   Tyrosine phosphatase family
       0.13   12.3   0.0       0.32   11.1   0.0    1.6  2  PTPlike_phytase  Inositol hexakisphosphate


Domain annotation for each model (and alignments):
>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   1.9e-12   8.5e-09      71     119 ..     120     171 ..     112     182 .. 0.79

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 1.9e-12
                 HTT-EE.EEEESSSSSHHHHHHHHHHHHHHTSCHHHHHHHHHHHS..TT-SS CS
        DSPc  71 qkgkkv.lVHCqaGisRSatliiaYlmktknlslneayeflkerr..paisp 119
                 +++k+v +VHC+aG  RS+t+++ Yl+++ +++ +ea+  + e+r  p + +
  KHJ32107.1 120 EENKRVaVVHCKAGKGRSGTMVCSYLISECGWKQEEALARFTEKRmrPGFGQ 171
                 455555268*****************************99977773355555 PP

>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   1.6e-09   7.4e-06     115     194 ..      63     147 ..      49     166 .. 0.72
   2 ?   -3.4   0.1       1.3   5.8e+03      82     113 ..     226     258 ..     221     275 .. 0.54

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 1.6e-09
                    SEEEEEEEEEETTTTEEEEEEEEEEESSS-SSSSG..SCCHHHHHHHHHHHHHH....STTSS-EEEECSSSSHHHHHHHHHHHHH CS
  Y_phosphatase 115 eyvlrelevkkkkeeseerevkqlqytnWpdhgvp..esaksllklirkveksk....eaksgpvvVhCsaGvgRtgtfvaldill 194
                    ++ + e++ +  +  + e+    +++  Wpdh  p  +    +l  irk  +++    e+++   vVhC+aG gR+gt+v+  ++ 
     KHJ32107.1  63 DWAIWEFRAEGAGYPD-EEVYGRVWHYPWPDHHPPpfNLVPVILTGIRKWLQDNpdgqEENKRVAVVHCKAGKGRSGTMVCSYLIS 147
                    5666666666666665.34445566668*****88433344555777777777789978888889**************9876655 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.3
                    ESS---S-SSTSSEEEETTEEEEEE..EEEEEE CS
  Y_phosphatase  82 ekcaqYwpeeeeesleygkikvtlk.ekekede 113
                    +k+++++  ++++ + +++ ++ +k  ++++++
     KHJ32107.1 226 KKIEDFYTFTKKDFMVIENNELDIKrISKTKNQ 258
                    566666665666666666655555532222222 PP

>> Y_phosphatase3  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   8.2e-06     0.037     121     152 ..     123     156 ..     106     166 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 8.2e-06
  Y_phosphatase3 121 e.pvlfHCtaGKDRTGvla.alllsllGvdeedi 152
                     +  +++HC aGK R G ++   l s +G ++e+ 
      KHJ32107.1 123 KrVAVVHCKAGKGRSGTMVcSYLISECGWKQEEA 156
                     2578************765156667777777765 PP

>> PTPlike_phytase  Inositol hexakisphosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   7.1e-05      0.32     130     155 ..     114     146 ..      82     147 .. 0.70
   2 ?   -3.0   0.0       1.5   6.9e+03     102     117 ..     249     264 ..     226     278 .. 0.55

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.1e-05
                      T........T-EEEEE-SSSSHHHHHHHHHHHHH CS
  PTPlike_phytase 130 e........ktalvfnCqmGrgRTTtamviatLl 155
                      +        k + v++C++G+gR+ t mv+ +L+
       KHJ32107.1 114 DnpdgqeenKRVAVVHCKAGKGRSGT-MVCSYLI 146
                      2445666779999**********988.6777765 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.5
                      EEEEEE-TTS---HHH CS
  PTPlike_phytase 102 YaRipitdekapeeed 117
                        Ri  t++++ +e+ 
       KHJ32107.1 249 IKRISKTKNQQSLETR 264
                      3333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 3144.60
//
Query:       KHJ32108.1  [L=700]
Description: putative duf803 domain membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.7e-91  305.0  32.4    6.3e-91  304.6  32.4    1.1  1  Mg_trans_NIPA  Magnesium transporter NIPA
      2e-06   28.0   6.5      2e-06   28.0   6.5    3.3  3  EamA           EamA-like transporter family
  ------ inclusion threshold ------
      0.013   16.0   0.0      0.037   14.5   0.0    1.7  1  HATPase_c      Histidine kinase-, DNA gyrase B-, and HSP90-li


Domain annotation for each model (and alignments):
>> Mg_trans_NIPA  Magnesium transporter NIPA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  304.6  32.4     1e-94   6.3e-91       4     293 ..      36     323 ..      33     325 .. 0.97

  Alignments for each domain:
  == domain 1  score: 304.6 bits;  conditional E-value: 1e-94
  Mg_trans_NIPA   4 liGvlLavssslfigssfilkkkgllrlarkgevrageGGyaylkevlWwaGlltmavGeaanfaayafaPatLvtPLGalsvivsavlasllLke 99 
                     iG++La++s  fig+sf+lkk gll++ ++    a+  Gy+ylk+ +WwaG+ +m++Ge+ nf+ayaf  a+LvtPLGalsv+v+ +l+ ++Lke
     KHJ32108.1  36 AIGIVLAIASGNFIGISFVLKKIGLLKANETYG-EAAGEGYGYLKNSYWWAGMTLMIIGEVCNFVAYAFVDAILVTPLGALSVVVTTILSAIFLKE 130
                    68*************************998774.555679******************************************************** PP

  Mg_trans_NIPA 100 kLkllgllGcllailGstvlvihaPkeeeieslkevadllvdpaflvyvilvvvvvlvlilyveprkGktnilvyitlcsllgsltvisvkalgia 195
                    +L l+g++Gc+l+i+Gs+++v+ aP e ++++++e+++ +  p+fl y+ ++++ +l++++ ++p++Gk+ ++vy+ +csl+gsl+v++ ++lg a
     KHJ32108.1 131 RLSLVGKVGCFLCIVGSIIIVMNAPAESSVANIQEMQKFVIAPGFLTYASVIIIGCLIVAIWIAPKYGKKTMMVYLSICSLIGSLSVVATQGLGAA 226
                    ************************************************************************************************ PP

  Mg_trans_NIPA 196 ikltlaGkaqlkyalawilllvlvicvvlqinyLnkaldifntsivtPvyyvlfttlvivasailfkefleasvddvlgelsGfllvllgvfllha 291
                    i   + G++q+k++  ++ll  +v ++++ + yLnkal++fn+++vtP yyv+ft ++i++s ilf+ f++ sv ++++   Gfl++  gv+ll+ 
     KHJ32108.1 227 IVAQIGGTSQFKQWFLYVLLAFVVSTLITEVIYLNKALNLFNAALVTPTYYVFFTSSTIITSTILFRGFSG-SVTSIITVFNGFLVICAGVVLLQL 321
                    *********************************************************************98.6889*****************987 PP

  Mg_trans_NIPA 292 tr 293
                     +
     KHJ32108.1 322 SK 323
                    66 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.9   0.2    0.0092        55       2      26 ..      37      61 ..      36      67 .. 0.89
   2 !   28.0   6.5   3.4e-10     2e-06      73     136 ..      88     151 ..      79     152 .. 0.94
   3 ?   -6.2  22.5         3   1.8e+04       8     134 ..     182     318 ..     175     321 .. 0.62

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0092
        EamA  2 lgillallaalfwaiyfvlskillr 26
                +gi+la+++  f +i+fvl ki+l 
  KHJ32108.1 37 IGIVLAIASGNFIGISFVLKKIGLL 61
                79*******************9875 PP

  == domain 2  score: 28.0 bits;  conditional E-value: 3.4e-10
        EamA  73 lgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvllil 136
                   ++++ ++ f a   ++a  ++++ +l++v+t+ils+++l+e+l+l   +g++l+++G ++i+
  KHJ32108.1  88 TLMIIGEVCNFVAYAFVDAILVTPLGALSVVVTTILSAIFLKERLSLVGKVGCFLCIVGSIIIV 151
                 56889999****************************************************9997 PP

  == domain 3  score: -6.2 bits;  conditional E-value: 3
        EamA   8 llaalfwaiyfvlskil....lrkvspltltfvrfliagillliiallkegklaklslkdwllllllgl.lgtvlaf.llffyalkktsasnasl.... 96 
                 ++  ++  + +++ k++    + ++s  +l +  +++a+  l + ++ + g       k+w+l++ll++ ++t+++  + +++al+  +a+ +++    
  KHJ32108.1 182 IIIGCLIVAIWIAPKYGkktmMVYLSICSLIGSLSVVATQGLGAAIVAQIGGT--SQFKQWFLYVLLAFvVSTLITEvIYLNKALNLFNAALVTPtyyv 278
                 44444444444555554111155557778899999999999999999999999..6667788886666549999999455689***9999977661111 PP

        EamA  97 .itslePvftlilsvlllgekltlkqll.givlillGvll 134
                  +ts + + ++il   + g   ++++++ g+++i +Gv+l
  KHJ32108.1 279 fFTSSTIITSTILFRGFSGSVTSIITVFnGFLVICAGVVL 318
                 1445555555555555556666655555456666666666 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   6.1e-06     0.037      39     106 ..     423     492 ..     408     498 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 6.1e-06
                 EEEEEESSSSSTTHHHTGTCS.TTCH..HCSTCHTSTSSS.HHHHHHHHHHHHTTTEEEEEEETTTEEEEEE CS
   HATPase_c  39 visveDnGiGipkedlkklfe.kfsq..ddstkrggggtG.lGlsivkklvelmgGeiwvesepgrGttftf 106
                  i+v+D+G+ ++++ ++ l++  f +  d++ +++  +tG l  si    ++l++G+i++++++  G++++ 
  KHJ32108.1 423 IITVRDSGRALSPNLHPPLGMsQFPSdfDSHHESEMPRTGsLASSIF--GARLHNGKIKFDQRSSTGSQIHN 492
                 59***************99999999999999999999***4455555..467899*****999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (700 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       859  (0.0479112); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.47
# Mc/sec: 4505.14
//
Query:       KHJ32109.1  [L=485]
Description: putative mmp37-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   6.4e-126  420.2   0.0   7.9e-126  419.9   0.0    1.1  1  Tam41_Mmp37  Phosphatidate cytidylyltransferase, mitochondria


Domain annotation for each model (and alignments):
>> Tam41_Mmp37  Phosphatidate cytidylyltransferase, mitochondrial
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  419.9   0.0  4.4e-130  7.9e-126       1     323 []     102     472 ..     102     472 .. 0.97

  Alignments for each domain:
  == domain 1  score: 419.9 bits;  conditional E-value: 4.4e-130
  Tam41_Mmp37   1 lekilkkfpapiryafaYGSgvfkqkgy...................kkkkkkkkmiDlifavsdpeewHslNlkqnpsHYsllrrlgskliskvqek 79 
                  l++ l++f+apiryafaYGSgvf+q+++                   ++ +++ kmiD+if+vs++++wHslNl+q+++HYs+l +lgs ++s vqek
   KHJ32109.1 102 LRRTLWHFRAPIRYAFAYGSGVFPQSNQklsspdhrpkyfnasatvnNALASAPKMIDFIFGVSHTQHWHSLNLAQHRDHYSALGSLGSGAVSMVQEK 199
                  6899**********************99*****************9999999********************************************** PP

  Tam41_Mmp37  80 lgagvyfnplvevngkliKYGVvsledllkDLleWdtLYlaGRlqKPvkilrddarirlanqvNlksAlraaLlllpekfteeeLyetiasLSYlGDl 177
                  lgagvyfnp+v+vng++iKYGVv+l++l++DL++W+tLYlaGRlqKPvkilrdd+r+r+anq+Nl+sAlraaLlllp++fte++Ly+ti+s+SY GD+
   KHJ32109.1 200 LGAGVYFNPYVKVNGITIKYGVVNLDTLCTDLTNWTTLYLAGRLQKPVKILRDDPRVRSANQTNLISALRAALLLLPSEFTEYDLYTTISSISYIGDP 297
                  ************************************************************************************************** PP

  Tam41_Mmp37 178 RmklggEnknKvkniVekqleefrelYkplleelenvellekekekeee.......kkleqdlspearaellrkLPkklrskllskyekkl....... 261
                  Rm++++En++Kv+niV  +l++fr+lY pl+e+l+nv +++ +++  +         +l qd++p +r +++r+LP+++r+kl++++++k+       
   KHJ32109.1 298 RMNFPTENPRKVANIVGCNLPNFRKLYLPLIENLPNVCFKDFRNTGLDWisdphinLRLIQDMDPVKRGNIVRRLPEAFRKKLYFQCQSKYkipqief 395
                  ***************************************999986654488988766677************************************** PP

  Tam41_Mmp37 262 .............skkkkdeeeflkkiakde..elaeevkkaikkivaksslkqslkgvltaGvvksvkYaleKlkk 323
                               + k+ ++++f++kia++   +l++e+k+ai+++v+++s++qs+kg+ltaGv+k++kY+ eK++k
   KHJ32109.1 396 dtileasnvgdemQIKRYEGGSFEQKIASEPpeNLRNELKNAIRRTVRWPSISQSFKGLLTAGVAKTWKYIGEKIRK 472
                  ***********99888999**********98656*****************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3626.07
//
Query:       KHJ32110.1  [L=767]
Description: putative spindle assembly checkpoint component mad1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-58  197.2  69.5    4.4e-58  197.2  69.5    1.5  1  MAD       Mitotic checkpoint protein
  ------ inclusion threshold ------
        4.8    7.3   8.0        6.9    6.8   0.1    4.4  4  DUF4248   Domain of unknown function (DUF4248)


Domain annotation for each model (and alignments):
>> MAD  Mitotic checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.2  69.5   4.9e-62   4.4e-58       1     657 [.     110     755 ..     110     759 .. 0.85

  Alignments for each domain:
  == domain 1  score: 197.2 bits;  conditional E-value: 4.9e-62
         MAD   1 raelieskaaleqlknelkqkelehkrarielekkasalkrqleeesdrnqelqkrikllekre.eekeealreqiElarlkkknlealnkkekekesk 98 
                 rae   +k  +e+ k+e +  +l h++++ ++ ++     ++++++++   e ++ +++l+    e +e   ++  E+  l+kk  ++++    +    
  KHJ32110.1 110 RAEIKTLKYTVENFKQEQELAKLRHENELRDVGRR---ADEDFKKTQQSDMERNNAVRQLQSSLkEIAEVRESADQENTALQKKLRDSIE----TSRRL 201
                 68889999******************999999999...4566777777777777777777777645555556666666666667666664....44556 PP

         MAD  99 laearevisalknelaelkrqiekqelelsekeseleelqerldllkkklseleqliqqlekkqkelaeaeqrikeLefeiqsqeddslivknsksela 197
                 ++++ +   + ++e++ l+r++ +qel++++  +++ +l++  + ++  +++l+q+     +k++ + e e+ i +L+ +       s+i ++  +++ 
  KHJ32110.1 202 EEKLLDSGIEHQEEIRSLERKVVEQELKIESLLKNIADLKNSSEKNESIFQDLQQKLF---SKESACGELEAEILQLKANTTDNDTLSIIKRELSEQVS 297
                 6667777788899***************************999888888887777655...5555566666777777788877777888888888888* PP

         MAD 198 ripelekelerlreenkklnelkenkelLkEevedlkkkLereEkareelvkLelekekleqeLksWeklaqdtgL.....nlrsPealsrkieqLqqe 291
                  i +le   ++l +e ++l+++++ +e+++Ee+  l++kL+ +E    el +  +++++le e  +W    q+++      +  sPea++r +++   +
  KHJ32110.1 298 HINKLELHNRELMSELTHLKQIHKSVEVIEEEKRSLQRKLDAKESLEIELNEERIQRQRLEDERLAWTAYLQTQAGhngrvEFDSPEAVARALIAERLQ 396
                 *******************************************************************997776543466789***********999999 PP

         MAD 292 eivlkeeksslesslkqlekaqreleqelaqllkkiedlkk..krkehkelkrRLQrrvllltkErdllrailesyDke...lteseaspklleRieea 385
                  +++ e+  sl+ +l+++e  ++ele+++++l +++e  ++  +r+  ++ + RL r+++l+ kE ++lra l+ yD e     ++  ++ +++Ri e+
  KHJ32110.1 397 SASFLERIGSLNGDLSNKECIIQELEKQKQALTENLEKIRTdeGRRSLDKAQLRLERQKVLAIKEAEYLRAQLKTYDTEdltFQPETVDESKMKRISEL 495
                 99***********************************998622578889999**************************9977778899999******** PP

         MAD 386 edlvqkvqahneeveaqlevaeeevggykqqastlerelqalrqqesladassskeevdslkkkleeLelerqrLreqkeelElele..rreLqgdydl 482
                 edlv+++++        l+ ++ e ++     +t   e q  +++ + + + +     d+l +kl +Le e + L++ k + E  l   ++ L+  +++
  KHJ32110.1 496 EDLVEQYRQE-------LQTVHDEFTAK----ETSKSESQFCKRKYDDSGENY---RQDQLMRKLRNLENEFEALKNTKLMVEKDLSvtKERLEAISQQ 580
                 ********33.......33344455542....455566677776665555556...789************************999888********** PP

         MAD 483 kktkVlhlseNPaakakqqkkeqlekLqaEierlkellkkleedkekkvaslpessltlafkevleLrkelesaelkiqrlKevFkakiqEFRevvYmL 581
                 +kt++l l++NP+++++ +k+  l+ L++E++ l   l+     +   ++s+p+s+lt a+ e +   + les  +++ rl  v+ ak++EFR+ v +L
  KHJ32110.1 581 NKTRILALRSNPTSEYQAIKQSTLDILRKENTELLSQLQ---GPSKMLIDSVPSSTLTAAKLEHAATLRALESEKKRNDRLMKVWGAKSTEFRQMVISL 676
                 ********************************9987777...6667789**********99887776677***************************** PP

         MAD 582 lGYkidittnsqyRltSmY.aeekedallfklsesne.sklkLl...etpfSrtleelidlhlaeqksiPaflsalTLeLf 657
                 lG+ i ++ +++ R+tS +   +++d  ++    ++e +++k+    e+ f+ ++++ ++++++e+ siP fl+alTLe  
  KHJ32110.1 677 LGWDIVFMRDGKTRMTSFFyPSKDDDENSIVF--DGEkGTMKISggpESAFAIKISDQVRFWCHERGSIPCFLAALTLEFW 755
                 *****************851555555555533..44446****83335678889*************************76 PP

>> DUF4248  Domain of unknown function (DUF4248)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.11   9.8e+02      17      38 ..     156     177 ..     155     184 .. 0.84
   2 ?    6.8   0.1   0.00077       6.9      22      51 ..     185     215 ..     179     225 .. 0.82
   3 ?   -1.7   0.1      0.35   3.1e+03      33      48 ..     305     320 ..     298     352 .. 0.76
   4 ?    1.1   0.3     0.047   4.2e+02      32      60 ..     423     451 ..     419     451 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.11
     DUF4248  17 dltpksAvrrLrrwIkrnpeLk 38 
                 d++ ++Avr+L++ +k+  e +
  KHJ32110.1 156 DMERNNAVRQLQSSLKEIAEVR 177
                 567899*******999988766 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.00077
     DUF4248  22 sAv.rrLrrwIkrnpeLkeeLtatgykkktr 51 
                 +A+ ++Lr  I+ ++ L+e+L + g +++++
  KHJ32110.1 185 TALqKKLRDSIETSRRLEEKLLDSGIEHQEE 215
                 555268*******************887764 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.35
     DUF4248  33 rnpeLkeeLtatgykk 48 
                 +n+eL+ eLt++   +
  KHJ32110.1 305 HNRELMSELTHLKQIH 320
                 6788888888876444 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.047
     DUF4248  32 krnpeLkeeLtatgykkktrlftpkqvel 60 
                 k++++L+e+L+++   +++r++ ++q +l
  KHJ32110.1 423 KQKQALTENLEKIRTDEGRRSLDKAQLRL 451
                 57889*****************9999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (767 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2648  (0.147694); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        94  (0.0052429); expected 17.9 (0.001)
Passed Fwd filter:                        35  (0.00195214); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.34u 0.36s 00:00:01.70 Elapsed: 00:00:00.56
# Mc/sec: 4134.57
//
Query:       KHJ32111.1  [L=510]
Description: putative low affinity iron transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      8e-48  161.4   9.8    4.7e-15   55.5   0.1    4.2  4  Iron_permease  Low affinity iron permease
  ------ inclusion threshold ------
        0.1   11.9   0.0       0.17   11.2   0.0    1.2  1  DDE_5          DDE superfamily endonuclease


Domain annotation for each model (and alignments):
>> Iron_permease  Low affinity iron permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.3   7.5e-12   6.7e-08       6      79 ..      73     156 ..      70     191 .. 0.76
   2 !   48.2   0.2   9.3e-17   8.3e-13       6      71 ..     209     274 ..     205     295 .. 0.86
   3 !   29.2   0.1   7.2e-11   6.5e-07       2      68 ..     316     382 ..     315     397 .. 0.90
   4 !   55.5   0.1   5.2e-19   4.7e-15       2      76 ..     419     493 ..     418     502 .. 0.91

  Alignments for each domain:
  == domain 1  score: 32.4 bits;  conditional E-value: 7.5e-12
  Iron_permease   6 kavarvagseiafvlallvivvwavsgplfkysdtwQLviNtgttiitFlmvfliqnsqnrdskaiqlkLdeL..........i 79 
                    ++++ +ags+++f++ l ++ +w   g+l++ +dtwQ++   + +i  ++m +l+ ++q   s+a+   L e+          +
     KHJ32111.1  73 DKITIFAGSSATFFVILGFVGIWGFIGALYGPTDTWQIMFQNASSIQVYIMDILLIRQQQNSSRAMITRLAEFssryttlkrlL 156
                    578899*********************************************766666666678888899999844444444331 PP

  == domain 2  score: 48.2 bits;  conditional E-value: 9.3e-17
  Iron_permease   6 kavarvagseiafvlallvivvwavsgplfkysdtwQLviNtgttii.tFlmvfliqnsqnrdskai 71 
                    + +ar  gs  +f+l  + i +w++ gp +k+sdtwQL iNt+t++  tF  vfl qn q r++++ 
     KHJ32111.1 209 QVIARSLGSLYTFFLYWIGIGIWMILGPSLKFSDTWQLYINTATALAlTFTSVFL-QNIQQREEEKH 274
                    779999****************************************98*****98.88888887763 PP

  == domain 3  score: 29.2 bits;  conditional E-value: 7.2e-11
  Iron_permease   2 ervakavarvagseiafvlallvivvwavsgplfkysdtwQLviNtgttiitFlmvfliqnsqnrds 68 
                    er+ + +a+v+gs + ++++l+++ vw+  gp +k++d+w L+i   t ++ F+  f++ +   r++
     KHJ32111.1 316 ERINDFLADVMGSGLGVLISLTFVAVWISIGPTLKFNDNWWLIIGSFTGLVGFVDGFVLRSLYYREE 382
                    7899999**********************************************98888776666665 PP

  == domain 4  score: 55.5 bits;  conditional E-value: 5.2e-19
  Iron_permease   2 ervakavarvagseiafvlallvivvwavsgplfkysdtwQLviNtgttii.tFlmvfliqnsqnrdskaiqlkLd 76 
                    + v+ a+++ +g++ a   a++v+v++ ++++++++s t+QL++Nt+t ii  Fl+++li  ++ ++++  ++++ 
     KHJ32111.1 419 DTVSLAISNGCGHRYAPPGAIAVVVALLITATVMSWSITGQLLCNTPTMIIeGFLLIVLIHAHNYANNER-RADFT 493
                    67999**********************************************99**********9888876.66665 PP

>> DDE_5  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   1.8e-05      0.17      14      61 ..     117     166 ..     111     189 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 1.8e-05
       DDE_5  14 glllylrgllldggr.ksvepmaarl.ehdgshqalqrflsrspwddakl 61 
                  +++y+++ ll  ++ +s  +m  rl e+++ +++l r+lsr p ++++l
  KHJ32111.1 117 SIQVYIMDILLIRQQqNSSRAMITRLaEFSSRYTTLKRLLSRIPKNQEAL 166
                 4899*********999*************************988775554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1034  (0.0576719); expected 358.6 (0.02)
Passed bias filter:                      632  (0.0352502); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3601.08
//
Query:       KHJ32112.1  [L=338]
Description: putative protein prenylyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-05   23.9   7.4     0.0019   17.9   1.3    3.2  2  PPTA      Protein prenyltransferase alpha subunit repeat


Domain annotation for each model (and alignments):
>> PPTA  Protein prenyltransferase alpha subunit repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.5   0.00015       2.6      19      28 .]     159     168 ..     158     168 .. 0.90
   2 !   17.9   1.3     1e-07    0.0019       9      25 ..     190     206 ..     185     208 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00015
                 HHHHHHHHCH CS
        PPTA  19 WnyRrwllek 28 
                 W +R+w+l++
  KHJ32112.1 159 WAHRKWVLDQ 168
                 ********86 PP

  == domain 2  score: 17.9 bits;  conditional E-value: 1e-07
                 HHH-TT-CHHHHHHHHH CS
        PPTA   9 iekdpkNYsaWnyRrwl 25 
                 +e++p+NY aW++ rwl
  KHJ32112.1 190 AERHPRNYYAWSHMRWL 206
                 5799************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       523  (0.0291706); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2531.62
//
Query:       KHJ32113.1  [L=259]
Description: putative phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.6e-34  117.6   0.0      7e-34  117.3   0.0    1.0  1  His_biosynth  Histidine biosynthesis protein


Domain annotation for each model (and alignments):
>> His_biosynth  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.3   0.0   3.9e-38     7e-34       4     223 ..       6     236 ..       3     242 .. 0.85

  Alignments for each domain:
  == domain 1  score: 117.3 bits;  conditional E-value: 3.9e-38
                   EEEEEETTEEEEECTTCS.......TCEEEETTSHHHHHHHHHHHT-SEEEEEEHHHHCTTHHHHHHHHHHHHHH-SSEEEEESSSSSHHHHHHHHH CS
  His_biosynth   4 palDlkdGkvVrlvkGdr.......fqelryagdpvelakryeeegadelhvvDldaakegreanldlveeiaeevfipvqvGGGIrsledveelle 93 
                   p+lDl+ Gkv ++v G+        +++++       +a+ y+ ++++  h+++l     +++a +++++e+  +    +q+GGGI +l+ +++++e
    KHJ32113.1   6 PCLDLHLGKVKQIVGGTLnsessdlKTNYVSHFPASHYARLYRLNNLRGSHIIML--GPGNESAAKEALSEWPGN----LQIGGGITNLN-AKNWIE 95 
                   9****************95554444444444444445999999999999999999..567888888888888888....***********.****** PP

                   CT-SEEEESHH....HHH-THHHHHHHHHHC..GGGEEEEEEEEEC...EEEEETTTTEEEEEEHHHHHHHHHHTT-SEEEEEETTTTTTSS---HH CS
  His_biosynth  94 agadkviigta....avknpelikelaekfg..sqkivvaiDarrg...ykvaikgwreetgldavelakkleelgageilltdidrdGtlsGpdle 181
                    ga+kvi+++     a  + e ++ ++e  g  ++k+v+ + +rr    + va+++w+  t+++++e   k+ e  ++e+l++  d++G ++G+d+ 
    KHJ32113.1  96 WGAEKVIVTSFlfpsAKFSQERLNTILESLGnnKEKLVIDLSCRRRdntWYVAMNKWQTLTDMEISEATIKYLEPFCSEFLIHAADNEGLQQGIDVL 192
                   **********944444455556777777776225799*******94468************************************************ PP

                   HHHHHHHHHSSEEEEESS--SHHHHHHHH..HTTCSEEEESHHH CS
  His_biosynth 182 ltkelaeavkipviasGGvgsledlkelk..segvdavivgsal 223
                   l+++l ++++ip++++GG ++++dl+ +k  s g  ++ +gsal
    KHJ32113.1 193 LVQKLTKWCNIPITYAGGGRNMQDLEMVKslSYGRIDLTIGSAL 236
                   *****************************777888999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1919.11
//
Query:       KHJ32114.1  [L=282]
Description: putative duf1183 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-82  276.9   0.1    4.6e-82  276.3   0.1    1.2  1  SARAF            SOCE-associated regulatory factor of calcium
  ------ inclusion threshold ------
      0.043   13.7   1.3      0.043   13.7   1.3    2.2  2  Rick_17kDa_Anti  Glycine zipper 2TM domain


Domain annotation for each model (and alignments):
>> SARAF  SOCE-associated regulatory factor of calcium homoeostasis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  276.3   0.1   5.2e-86   4.6e-82      14     331 .]      17     282 .]       6     282 .] 0.78

  Alignments for each domain:
  == domain 1  score: 276.3 bits;  conditional E-value: 5.2e-86
       SARAF  14 aakkkkdkvlLsdvqaLTLrkgrlTtaRRvspipQLkCvggsagsaaslyevdvvrCtNkGsdydgedvqWeCkadLpeelklGstdViCEGYdspdDp 112
                  a+ +kd+vlLs+v++LTLr++++T++RRv++ipQL+C+ g     +s y+vd +rC+N+Gs y+ edv+W+C+a++p+e+klGstdViCEGY++ +D+
  KHJ32114.1  17 EAAIPKDAVLLSQVRTLTLRADAKTSHRRVPAIPQLTCT-G---PGCSFYKVDLMRCKNQGSAYNPEDVEWSCTASIPREFKLGSTDVICEGYSNRNDN 111
                 3334679********************************.6...4556678************************************************ PP

       SARAF 113 yvLkGSCGveYrLelteegekkykkseeskkeeekkeevkkksssssasllfvvlvllviayivykaflaaeeereaeaeggrrgeggggggggggpgs 211
                  +LkGSCGv+YrL  te+gekk++   + +           + + s  +l+f+v++++++++i+y+a  a  +      +  rr +  +gggggg+p  
  KHJ32114.1 112 KILKGSCGVKYRLLFTEAGEKKFGGYYKFR-----------TAELSFQNLMFMVAFIGILFWILYSALRAWPTG-----NYFRRFGRLWGGGGGGYP-- 192
                 ***********************9866533...........2344556677******************88775.....556777777777777763.. PP

       SARAF 212 eeeqddpPppysltksqkpssssessqqgeqeeswrpGFWtGlatGaaaGYlagrrraqneeteeeekeksssWgsssegsssssssssssssasssss 310
                      dpPppy      k   +     + +q+++w+pGFWtG+ +GaaaGY+ag+r++++  + +  +++++ ++ ++             +++++ ++
  KHJ32114.1 193 ----WDPPPPYP----GK---RYG---SDQQQAGWKPGFWTGALGGAAAGYMAGNRSSSRGFSFT--ERREDFFN-ER-------------DNHTRPRR 261
                 ....59*****3....22...111...2223568***********************96443333..22222332.21.............11222233 PP

       SARAF 311 sssssssstrestGFGgTrRR 331
                  +sssss++ estGFG+T+RR
  KHJ32114.1 262 VTSSSSSTNYESTGFGSTSRR 282
                 4556678999**********9 PP

>> Rick_17kDa_Anti  Glycine zipper 2TM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   2.1      0.17   1.5e+03       4      11 ..     183     190 ..     180     191 .. 0.71
   2 ?   13.7   1.3   4.8e-06     0.043      24      39 ..     218     233 ..     210     236 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.17
  Rick_17kDa_Anti   4 liGAaaGg 11 
                      l+G+++Gg
       KHJ32114.1 183 LWGGGGGG 190
                      67888887 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 4.8e-06
  Rick_17kDa_Anti  24 vlGavvGAaaGavaGn 39 
                      ++Ga++GAaaG +aGn
       KHJ32114.1 218 WTGALGGAAAGYMAGN 233
                      8999999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       479  (0.0267165); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2083.92
//
Query:       KHJ32115.1  [L=721]
Description: putative e3 ubiquitin-protein ligase bre1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.5e-29   99.9  11.7    6.5e-29   99.9  11.7    6.2  5  BRE1            BRE1 E3 ubiquitin ligase
      1e-07   31.7   7.1    1.7e-07   31.0   7.1    1.3  1  zf-C3HC4_3      Zinc finger, C3HC4 type (RING finger)
    1.2e-07   31.6   4.7    2.3e-07   30.7   4.7    1.5  1  zf-RING_UBOX    RING-type zinc-finger
    1.6e-07   31.1   8.4    2.7e-07   30.3   8.4    1.4  1  zf-C3HC4_2      Zinc finger, C3HC4 type (RING finger)
    1.2e-06   28.7   7.8      2e-06   28.0   7.8    1.4  1  zf-RING_2       Ring finger domain
      3e-06   27.0   9.9    5.2e-06   26.2   9.9    1.4  1  zf-C3HC4        Zinc finger, C3HC4 type (RING finger)
    2.6e-05   24.1   9.4    4.4e-05   23.4   9.4    1.4  1  zf-RING_5       zinc-RING finger domain
    0.00017   21.4   7.7    0.00029   20.6   7.7    1.4  1  Prok-RING_4     Prokaryotic RING finger family 4
      0.006   16.7   6.0      0.012   15.7   6.0    1.5  1  DUF1272         Protein of unknown function (DUF1272)
  ------ inclusion threshold ------
      0.013   15.7   0.7      0.013   15.7   0.7    7.8  8  JIP_LZII        JNK-interacting protein  leucine zipper II
       0.02   15.7   6.5       0.02   15.7   6.5    8.9  9  Rho_Binding     Rho Binding
      0.022   14.9   5.9       0.04   14.1   5.9    1.5  1  zf-C3HC4_4      zinc finger of C3HC4-type, RING
      0.022   14.6   6.4        0.1   12.4   6.7    1.9  2  zf-RING_4       RING/Ubox like zinc-binding domain
       0.05   13.8   0.1       0.05   13.8   0.1    7.7  7  HALZ            Homeobox associated leucine zipper
        0.2   11.6   2.3       0.39   10.6   2.3    1.5  1  zf-RING_6       zf-RING of BARD1-type protein
       0.29   11.5   8.0        1.5    9.2   0.3    3.5  3  zf-C2H2_jaz     Zinc-finger double-stranded RNA-binding
       0.43   10.9   7.2        2.8    8.3   7.2    2.2  1  zf-rbx1         RING-H2 zinc finger domain
       0.56   10.3   6.1        1.1    9.3   6.1    1.5  1  DZR             Double zinc ribbon
       0.88    9.6   3.4        2.3    8.2   3.4    1.7  1  Gin             Inhibitor of sigma-G Gin
       0.95    9.6   4.8        2.9    8.1   4.8    1.8  1  zf-RING_10      zinc RING finger of MSL2
        3.1    8.0  11.5         74    3.6  11.1    2.4  2  FYVE            FYVE zinc finger
        6.4    7.9   9.5        8.9    7.5   0.2    3.8  3  zf-C2H2_4       C2H2-type zinc finger


Domain annotation for each model (and alignments):
>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   2.4       1.2   9.4e+02       6      47 ..     171     212 ..     166     235 .. 0.51
   2 ?   -1.6   5.9       3.5   2.9e+03      10      91 ..     281     362 ..     272     365 .. 0.71
   3 ?    1.8   3.3      0.32   2.6e+02      36      93 ..     371     428 ..     367     432 .. 0.89
   4 !   99.9  11.7     8e-32   6.5e-29       2      95 .]     474     567 ..     473     567 .. 0.99
   5 !    6.8   5.9    0.0086         7       4      58 ..     595     649 ..     592     659 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 1.2
        BRE1   6 vklekafeelseqlskkvkeltileekklrleaekakadqky 47 
                 +kl++   +l +  ++ +  + +l  +k  l++  ++    y
  KHJ32115.1 171 EKLQARLTDLLARQKESIVRIDRLRTEKEELTQRLEESSLRY 212
                 444444444444444444444444444444444444444444 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 3.5
        BRE1  10 kafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrklke 91 
                 ++ + + +++++++++lt+   +++ l+ e       +++++ + d++   +++L + + + +e  e+++   ++++ ++++
  KHJ32115.1 281 EQLQTVLAENKSLTEQLTAANTRLSSLNEEDFARTDLFKQIRVQHDDIIRRINHLEATNIQLREEAERFQAERTAYRVQIEN 362
                 5556666777777777777777777777777777777777777777777777777777777777777777777777777766 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.32
        BRE1  36 leaekakadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrklkele 93 
                 le++ ++ +q    ++  +d l ++l   +++ ++++++ e Lk+l ++   ++++le
  KHJ32115.1 371 LESQLQRVEQDLIRIRSTRDELAADLSIRKASQDQNRSSREHLKDLNAAKDDRIASLE 428
                 677788889999999999***************************9999999999888 PP

  == domain 4  score: 99.9 bits;  conditional E-value: 8e-32
        BRE1   2 qkELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrklkeleke 95 
                 +kE++ l++a++++s+++skkv++l++le++++ l+aekakadqkyfaa++++d++ +e++ L++++sKsse+i+qLke+e++++++l++lek+
  KHJ32115.1 474 NKEMPALQAAWRKASSLASKKVSDLKSLEDRVQVLSAEKAKADQKYFAARKDMDTRIQEVRSLKAQNSKSSEIITQLKEIETSNRTLLSNLEKQ 567
                 89*******************************************************************************************8 PP

  == domain 5  score: 6.8 bits;  conditional E-value: 0.0086
        BRE1   4 ELvklekafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdale 58 
                  +++l+ ++ el++ l++k + ++  +e++l +e+e+++ + ky ++ ++k++ +
  KHJ32115.1 595 KVENLKSQITELNNMLKSKDSLYSTTKERILIAEQEIEQIRVKYESTLKEKEQWK 649
                 5789999******************************************999764 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   7.1     2e-10   1.7e-07       4      48 ..     668     712 ..     666     714 .. 0.93

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 2e-10
                 B-TTTSSSBS-EEETTEEEEEE-HHHHHHHHH.TT-B-TTT--B-- CS
  zf-C3HC4_3   4 eCviClerprnvvllpCgHlvlCeeCaekllk.rkkkCpiCrrpie 48 
                 +C iC +  +n+++  CgH+ +C++C+ + l+ r +kCp C +p +
  KHJ32115.1 668 LCTICRKDFKNTAIKVCGHT-FCNSCVADRLAnRMRKCPNCSSPFS 712
                 6*******************.*****9988888*********9976 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   4.7   2.8e-10   2.3e-07       1      39 []     669     705 ..     669     705 .. 0.91

  Alignments for each domain:
  == domain 1  score: 30.7 bits;  conditional E-value: 2.8e-10
  zf-RING_UBOX   1 CpIClelftdP.lvlpCGHtFCreClwelskslegafkCP 39 
                   C+IC+ +f++  +++ CGHtFC +C+   ++  ++ +kCP
    KHJ32115.1 669 CTICRKDFKNTaIKV-CGHTFCNSCV--ADRLANRMRKCP 705
                   *********887444.**********..899999*****9 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   8.4   3.3e-10   2.7e-07       2      40 .]     669     707 ..     668     707 .. 0.96

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 3.3e-10
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLeekn.eCPlC 40 
                 C+iC   +k++  ++ CgH+fC++C++  L +   +CP C
  KHJ32115.1 669 CTICRKDFKNT-AIKVCGHTFCNSCVADRLANRMrKCPNC 707
                 **********7.****************9999988***** PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   7.8   2.5e-09     2e-06       3      43 ..     669     707 ..     667     708 .. 0.85

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 2.5e-09
   zf-RING_2   3 CpICleelssadsvlllpCgHvfhreClerwlrssst.CPlC 43 
                 C+IC +++++  +++++ CgH+f+ +C+++ l+++ + CP+C
  KHJ32115.1 669 CTICRKDFKN--TAIKV-CGHTFCNSCVADRLANRMRkCPNC 707
                 ********75..55666.**********8888888888**** PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   9.9   6.4e-09   5.2e-06       1      41 []     669     707 ..     669     707 .. 0.97

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 6.4e-09
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 C iC + +k++  +  C+H+fC++C+   l  ++ +kCP+C
  KHJ32115.1 669 CTICRKDFKNTA-IKVCGHTFCNSCVADRLA-NRMRKCPNC 707
                 ************.******************.88899**** PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   9.4   5.4e-08   4.4e-05       2      43 ..     669     708 ..     668     709 .. 0.95

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 5.4e-08
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll.ekeavCpiCr 43 
                 C +C++ +   ++  +  CgH+fC++C+  +l +++++Cp C+
  KHJ32115.1 669 CTICRKDF---KNTAIKVCGHTFCNSCVADRLaNRMRKCPNCS 708
                 9*******...999999*************************7 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   7.7   3.5e-07   0.00029       1      43 [.     669     714 ..     669     717 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 3.5e-07
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCfdskdls...sCPlCqrrisks 43 
                  C +C++  k+ +++ CgH +C++C  +   +    CP C + +s++
   KHJ32115.1 669 CTICRKDFKNTAIKVCGHTFCNSCVADRLANrmrKCPNCSSPFSSN 714
                  *************************999666667*****9887765 PP

>> DUF1272  Protein of unknown function (DUF1272)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   6.0   1.5e-05     0.012       6      49 ..     667     709 ..     662     714 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.5e-05
     DUF1272   6 pnCecCdkdlppdseearicsyEctFCaeCaeevlenv...CPncgG 49 
                   C  C kd ++++   ++c   +tFC++C+  +l+n+   CPnc+ 
  KHJ32115.1 667 ALCTICRKDFKNTA--IKVCG--HTFCNSCVADRLANRmrkCPNCSS 709
                 56999999999888..66665..7***********763344****86 PP

>> JIP_LZII  JNK-interacting protein  leucine zipper II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   2.1      0.12        95      32      63 ..     188     219 ..     170     225 .. 0.81
   2 ?    2.0   1.0      0.29   2.4e+02      44      69 ..     285     310 ..     276     311 .. 0.69
   3 ?   15.7   0.7   1.6e-05     0.013      25      65 ..     322     362 ..     319     368 .. 0.90
   4 ?    0.4   0.2      0.93   7.6e+02      38      69 ..     360     391 ..     357     396 .. 0.69
   5 ?    0.8   0.6       0.7   5.7e+02      23      46 ..     415     437 ..     404     455 .. 0.75
   6 ?   -0.5   0.1       1.8   1.5e+03      36      60 ..     457     481 ..     438     489 .. 0.67
   7 ?   -0.6   0.6       1.9   1.6e+03      32      70 ..     530     568 ..     521     569 .. 0.67
   8 ?    1.8   4.6      0.34   2.8e+02      27      70 ..     588     631 ..     564     632 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.12
    JIP_LZII  32 IarvdeLtsereiLreEleslqkakerlesri 63 
                 I r+d L +e+e L++ le++     + e+r+
  KHJ32115.1 188 IVRIDRLRTEKEELTQRLEESSLRYIKAEKRL 219
                 8999*******999999988877777777766 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.29
    JIP_LZII  44 iLreEleslqkakerlesrikelEee 69 
                 ++  E++sl++++++ ++r++ l ee
  KHJ32115.1 285 TVLAENKSLTEQLTAANTRLSSLNEE 310
                 44567788888888888888777765 PP

  == domain 3  score: 15.7 bits;  conditional E-value: 1.6e-05
    JIP_LZII  25 nvvkddLIarvdeLtsereiLreEleslqkakerlesrike 65 
                  v+ dd+I r+ +L   +  LreE e+ q+++++ + +i++
  KHJ32115.1 322 RVQHDDIIRRINHLEATNIQLREEAERFQAERTAYRVQIEN 362
                 5889*****************************99999865 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.93
    JIP_LZII  38 LtsereiLreEleslqkakerlesrikelEee 69 
                 + +e +iL+ Eles  +  e+   ri+ + +e
  KHJ32115.1 360 IENEADILTGELESQLQRVEQDLIRIRSTRDE 391
                 67888899999988766666655666555555 PP

  == domain 5  score: 0.8 bits;  conditional E-value: 0.7
    JIP_LZII  23 aLnvvkddLIarvdeLtsereiLr 46 
                  Ln +kdd Ia + eL +er  L+
  KHJ32115.1 415 DLNAAKDDRIASL-ELENERLRLQ 437
                 6999999988887.4777776665 PP

  == domain 6  score: -0.5 bits;  conditional E-value: 1.8
    JIP_LZII  36 deLtsereiLreEleslqkakerle 60 
                 d+L+  +e+L++ +++++k+  +l+
  KHJ32115.1 457 DQLKAKYESLEQQFSAINKEMPALQ 481
                 5666666666666666655554444 PP

  == domain 7  score: -0.6 bits;  conditional E-value: 1.9
    JIP_LZII  32 IarvdeLtsereiLreEleslqkakerlesrikelEeel 70 
                 I++v  L+ +++  +e +++l+++ ++ ++ +++lE++l
  KHJ32115.1 530 IQEVRSLKAQNSKSSEIITQLKEIETSNRTLLSNLEKQL 568
                 555666666666666677777777777777777777765 PP

  == domain 8  score: 1.8 bits;  conditional E-value: 0.34
    JIP_LZII  27 vkddLIarvdeLtsereiLreEleslqkakerlesrikelEeel 70 
                  ++d+ ++v++L+s+ + L++ l+s  +  ++ ++ri  +E+e+
  KHJ32115.1 588 ITRDMTSKVENLKSQITELNNMLKSKDSLYSTTKERILIAEQEI 631
                 5789999*********9999999999999999999999999986 PP

>> Rho_Binding  Rho Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1       3.3   2.7e+03       5      25 ..      65      85 ..      61     106 .. 0.78
   2 ?   -1.3   0.0       4.9     4e+03       8      43 ..     141     177 ..     138     187 .. 0.71
   3 ?    5.4   1.7     0.041        34       5      31 ..     191     217 ..     188     234 .. 0.67
   4 ?    2.1   2.1      0.42   3.4e+02       4      45 ..     272     310 ..     269     324 .. 0.63
   5 ?    1.0   0.9      0.92   7.5e+02       9      50 ..     322     363 ..     315     376 .. 0.76
   6 ?   -0.2   1.1       2.2   1.8e+03      17      40 ..     404     428 ..     368     437 .. 0.56
   7 ?    4.1   0.3     0.099        81       3      45 ..     442     486 ..     440     494 .. 0.79
   8 ?    5.2   2.7     0.048        39       3      48 ..     524     569 ..     522     573 .. 0.92
   9 ?   15.7   6.5   2.4e-05      0.02       2      52 ..     593     647 ..     592     655 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 3.3
  Rho_Binding  5 venlakekeelnkklkkleee 25
                 + +++ ek  l+ +lk++ ++
   KHJ32115.1 65 MLEYKREKATLETQLKDIRKR 85
                 556788999999999887654 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 4.9
  Rho_Binding   8 lakekeelnkklkkleeelekak.eeeeeieklkasy 43 
                  la+  + + +kl ++  +l++a+ + +++iekl+a  
   KHJ32115.1 141 LASKAKHIRNKLGTIFTNLNAARgHPSDDIEKLQARL 177
                  6666677778888888888888877888888888554 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.041
  Rho_Binding   5 venlakekeelnkklkkleeelekake 31 
                  ++ l++ekeel+++l++ + ++ ka++
   KHJ32115.1 191 IDRLRTEKEELTQRLEESSLRYIKAEK 217
                  68899**********988877766653 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.42
  Rho_Binding   4 dvenlakekeelnkklkkleeelekakeeeeeieklkasyek 45 
                  +v+ +ak+ke+l+  l + ++  e++++ + ++++l+   e+
   KHJ32115.1 272 SVAVVAKQKEQLQTVLAENKSLTEQLTAANTRLSSLN---EE 310
                  5677778888887777666666666665556666555...44 PP

  == domain 5  score: 1.0 bits;  conditional E-value: 0.92
  Rho_Binding   9 akekeelnkklkkleeelekakeeeeeieklkasyekqLktE 50 
                  + + +++ +++++le    +++ee+e+ +  ++ y  q+++E
   KHJ32115.1 322 RVQHDDIIRRINHLEATNIQLREEAERFQAERTAYRVQIENE 363
                  556677777777888888888888888888888888888887 PP

  == domain 6  score: -0.2 bits;  conditional E-value: 2.2
  Rho_Binding  17 kklkkleeelekak.eeeeeieklk 40 
                   + ++  e+l+ ++ +++++i++l+
   KHJ32115.1 404 DQNRSSREHLKDLNaAKDDRIASLE 428
                  2333333344443333466666666 PP

  == domain 7  score: 4.1 bits;  conditional E-value: 0.099
  Rho_Binding   3 kdvenlakekeeln.kklkkleeelekak.eeeeeieklkasyek 45 
                  +d+ n ++e ++ln  +lk   e+le++  + ++e+  l+a + k
   KHJ32115.1 442 SDIPNFKTELNDLNfDQLKAKYESLEQQFsAINKEMPALQAAWRK 486
                  677788889999986788888888888876678888888877655 PP

  == domain 8  score: 5.2 bits;  conditional E-value: 0.048
  Rho_Binding   3 kdvenlakekeelnkklkkleeelekakeeeeeieklkasyekqLk 48 
                  kd++++ +e   l+++ +k +e + ++ke e +  +l  + ekqL+
   KHJ32115.1 524 KDMDTRIQEVRSLKAQNSKSSEIITQLKEIETSNRTLLSNLEKQLS 569
                  8999************************999999999999****97 PP

  == domain 9  score: 15.7 bits;  conditional E-value: 2.4e-05
  Rho_Binding   2 tkdvenlakekeelnkklkkleeelekake....eeeeieklkasyekqLktErl 52 
                  t++venl+++ +eln+ lk+  + +++ ke     e+eie+++++ye++Lk+ + 
   KHJ32115.1 593 TSKVENLKSQITELNNMLKSKDSLYSTTKEriliAEQEIEQIRVKYESTLKEKEQ 647
                  789*************************9889999***************97555 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   5.9   4.9e-05      0.04       1      42 []     669     707 ..     669     707 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 4.9e-05
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 C iC++ +++ +   CGh+fC sC+     +       Cp C
  KHJ32115.1 669 CTICRKDFKNTAIKVCGHTFCNSCVADRLANRMR---KCPNC 707
                 99*******999999**********987777655...58888 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       2.2   1.8e+03      38      48 .]     667     677 ..     662     677 .. 0.75
   2 ?   12.4   6.7   0.00012       0.1      20      47 ..     684     711 ..     669     712 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 2.2
   zf-RING_4  38 grCPaCreeYk 48 
                 + C  Cr+++k
  KHJ32115.1 667 ALCTICRKDFK 677
                 56888888875 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.00012
   zf-RING_4  20 CgyqiClfCyhrileeeegrCPaCreeY 47 
                 Cg+ +C  C  + l++   +CP+C +++
  KHJ32115.1 684 CGHTFCNSCVADRLANRMRKCPNCSSPF 711
                 9***********************9998 PP

>> HALZ  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.2       2.2   1.8e+03      25      40 ..      69      84 ..      67      86 .. 0.86
   2 ?    1.4   0.6      0.46   3.7e+02      20      36 ..     190     206 ..     171     207 .. 0.84
   3 ?    0.5   0.7      0.89   7.2e+02      22      36 ..     284     298 ..     278     304 .. 0.80
   4 ?    2.6   0.2       0.2   1.6e+02      23      36 ..     426     439 ..     422     440 .. 0.86
   5 ?   13.8   0.1   6.2e-05      0.05       7      33 ..     456     482 ..     454     486 .. 0.87
   6 ?    2.3   0.2      0.25   2.1e+02      29      42 ..     597     610 ..     594     611 .. 0.90
   7 ?   -1.3   0.1       3.3   2.7e+03      18      30 ..     635     647 ..     632     656 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 2.2
        HALZ 25 kkenekLkaelqeLke 40
                k+e+ +L+++l+  ++
  KHJ32115.1 69 KREKATLETQLKDIRK 84
                79*********98765 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.46
        HALZ  20 dydsLkkenekLkaelq 36 
                 + d L+ e+e+L + l+
  KHJ32115.1 190 RIDRLRTEKEELTQRLE 206
                 57999999999988776 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.89
        HALZ  22 dsLkkenekLkaelq 36 
                 + +++en++L  +l 
  KHJ32115.1 284 QTVLAENKSLTEQLT 298
                 578899999999985 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.2
        HALZ  23 sLkkenekLkaelq 36 
                 sL+ ene+L+ ++ 
  KHJ32115.1 426 SLELENERLRLQIT 439
                 899*******9986 PP

  == domain 5  score: 13.8 bits;  conditional E-value: 6.2e-05
        HALZ   7 YdvLKasYdaLksdydsLkkenekLka 33 
                 +d LKa+Y++L  ++ +++ke  +L+a
  KHJ32115.1 456 FDQLKAKYESLEQQFSAINKEMPALQA 482
                 789999999999999999999888886 PP

  == domain 6  score: 2.3 bits;  conditional E-value: 0.25
        HALZ  29 ekLkaelqeLkekl 42 
                 e+Lk+++ eL+++l
  KHJ32115.1 597 ENLKSQITELNNML 610
                 78*********998 PP

  == domain 7  score: -1.3 bits;  conditional E-value: 3.3
        HALZ  18 ksdydsLkkenek 30 
                 + +y+s +ke+e+
  KHJ32115.1 635 RVKYESTLKEKEQ 647
                 6689999999984 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   2.3   0.00048      0.39      20      55 ..     678     716 ..     659     720 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00048
   zf-RING_6  20 pvclggcehifcsncisdcfgs...gcpvcytpawiqdv 55 
                    +  c h fc  c++d +      cp c +p   +dv
  KHJ32115.1 678 NTAIKVCGHTFCNSCVADRLANrmrKCPNCSSPFSSNDV 716
                 346778************99863337****999887777 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.3    0.0019       1.5      10      24 ..     130     144 ..     128     147 .. 0.91
   2 ?    4.0   0.8     0.081        66       4      13 ..     669     678 ..     669     680 .. 0.95
   3 ?    0.5   0.0      0.98     8e+02       4      21 ..     704     721 .]     702     721 .] 0.90

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0019
                  BBSSHHHHHCCTTSH CS
  zf-C2H2_jaz  10 yFksenaldnHlkSK 24 
                  +Fk ++ ++nHl SK
   KHJ32115.1 130 TFKGSEEFQNHLASK 144
                  7*************8 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.081
                  BTTTTBBBSS CS
  zf-C2H2_jaz   4 CvlCdKyFks 13 
                  C +C K Fk+
   KHJ32115.1 669 CTICRKDFKN 678
                  *********8 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.98
                  BTTTTBBBSSHHHHHCCT CS
  zf-C2H2_jaz   4 CvlCdKyFksenaldnHl 21 
                  C+ C+  F+s  ++  H+
   KHJ32115.1 704 CPNCSSPFSSNDVMTIHM 721
                  **********99999886 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   7.2    0.0034       2.8      14      54 ..     669     707 ..     666     708 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0034
     zf-rbx1  14 cieckapgdeecpvvlGeCgHaFHlhCiskWlkt.rkvCPlc 54 
                 c+ c+++ ++ + +++  CgH+F   C+ + l +  ++CP c
  KHJ32115.1 669 CTICRKDFKN-TAIKV--CGHTFCNSCVADRLANrMRKCPNC 707
                 7777777777.55555..***********999985678**99 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   6.1    0.0014       1.1      12      48 ..     666     707 ..     659     715 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0014
         DZR  12 arfCseCgtklkavaa....edrCpsCgek.vdpearfCpeC 48 
                    C  C+++ k++a     +++C sC ++ + ++ r Cp+C
  KHJ32115.1 666 FALCTICRKDFKNTAIkvcgHTFCNSCVADrLANRMRKCPNC 707
                 567888888887444488888888888888888888888888 PP

>> Gin  Inhibitor of sigma-G Gin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.4    0.0028       2.3       1      23 [.     669     692 ..     669     698 .. 0.91

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0028
                 -TTT--EESS.EE-SSS--EEHHH CS
         Gin   1 CiiCekekee.GiiilgkfICeeC 23 
                 C iC+k+ ++  i ++g+  C++C
  KHJ32115.1 669 CTICRKDFKNtAIKVCGHTFCNSC 692
                 ******98855************* PP

>> zf-RING_10  zinc RING finger of MSL2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   4.8    0.0036       2.9       3      57 ..     669     719 ..     666     721 .] 0.64

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0036
  zf-RING_10   3 CvvCckLLvdPlepkekeCqHyvCrlCvgkkk.klkpsCsqCkdyekyeenkqlrl 57 
                 C++C k   d  + + k C+H  C +Cv ++  + + +C++C   + ++ n  +++
  KHJ32115.1 669 CTICRK---DFKNTAIKVCGHTFCNSCVADRLaNRMRKCPNCS--SPFSSNDVMTI 719
                 666655...444566789**********876313344555554..45777777766 PP

>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6  11.1     0.091        74      10      45 ..     667     698 ..     661     707 .. 0.79
   2 ?    3.0   0.2      0.14   1.1e+02       7      20 ..     699     712 ..     695     718 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.091
                 SB-TTT--B--SSS--EE-TTT--EE-STTS-EEE. CS
        FYVE  10 kkCeiCakkFsllrrrhhCrlCGkvvCekCssklva 45 
                 + C+iC+k F+        ++CG+ +C++C   ++a
  KHJ32115.1 667 ALCTICRKDFKN----TAIKVCGHTFCNSCVADRLA 698
                 67********65....45679*********988774 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.14
                 .--SB-TTT--B-- CS
        FYVE   7 sevkkCeiCakkFs 20 
                 ++++kC++C+++Fs
  KHJ32115.1 699 NRMRKCPNCSSPFS 712
                 56899*******96 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0         3   2.4e+03       9      22 ..     130     143 ..     129     144 .. 0.87
   2 ?    3.5   0.7       0.2   1.6e+02       3      12 ..     669     678 ..     668     688 .. 0.85
   3 ?    7.5   0.2     0.011       8.9       2      20 ..     703     721 .]     702     721 .] 0.86

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 3
   zf-C2H2_4   9 sFsskkaLlrHlkt 22 
                 +F+ ++++++Hl++
  KHJ32115.1 130 TFKGSEEFQNHLAS 143
                 799999*****975 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.2
   zf-C2H2_4   3 CpiCgksFss 12 
                 C+iC+k F++
  KHJ32115.1 669 CTICRKDFKN 678
                 ********86 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.011
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHl 20 
                 kCp C+ +Fss++ +  H+
  KHJ32115.1 703 KCPNCSSPFSSNDVMTIHM 721
                 8********8888788897 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (721 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2532  (0.141224); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                       110  (0.00613531); expected 17.9 (0.001)
Passed Fwd filter:                        66  (0.00368119); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 1.48u 0.37s 00:00:01.85 Elapsed: 00:00:00.59
# Mc/sec: 3674.97
//
Query:       KHJ32116.1  [L=510]
Description: putative protein pbn1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-60  202.9   0.0    8.1e-60  202.3   0.0    1.3  1  PIG-X     PIG-X / PBN1


Domain annotation for each model (and alignments):
>> PIG-X  PIG-X / PBN1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.3   0.0   4.5e-64   8.1e-60       1     210 [.     276     486 ..     276     487 .. 0.92

  Alignments for each domain:
  == domain 1  score: 202.3 bits;  conditional E-value: 4.5e-64
       PIG-X   1 ptGlHptlqltvssaekslkpp..ekeCklllyltlpssvfvDkYqLaeldelf......aelvvvsgevdLEaPeykvkewgsevllelatpkeekee 91 
                 p+G+Hp l+++vs a+     p  ++eC+l+ yl+lp+++f+DkYq+   d lf      + l  v + vdLE Pey++ +wgs++l++latp + k++
  KHJ32116.1 276 PSGMHPFLEIKVSDAAH----PveNQECELYSYLSLPRKIFIDKYQFL--DALFiadkniSALSFVDNMVDLEVPEYSLFSWGSSALIKLATP-DIKQS 367
                 79**********44332....2348*********************88..888888998735999***************************7.55889 PP

       PIG-X  92 seeewtvtlPlHlRYlapsseesgytevelpsPevfwaCeseaeegeklskspfdrknlgydglfgektvFyhlkpkpesesl..vesievPvgdtsda 188
                 ++ e+ +++P HlRYl p s+++g +e+e+p+P+vfwaC  + e    +s++pfdr++ gyd++f+++tvFyhl+pk+ +++   v++++vPv++++++
  KHJ32116.1 368 QSFELAAQIPTHLRYLLPVSNSDGLREIEIPYPNVFWAC--TPEGPLDFSNNPFDRTHIGYDNFFDHRTVFYHLNPKSIRQDGrlVNRLQVPVLNLDQT 464
                 999***************99*******************..666678*******************************9888899************** PP

       PIG-X 189 alVeigTllvvllgflwvlwkl 210
                 ++Ve  Tl ++ lgf+wv+w+l
  KHJ32116.1 465 RWVEGWTLWAIGLGFFWVCWCL 486
                 ********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3657.61
//
Query:       KHJ32117.1  [L=491]
Description: putative transcription factor tfiiib [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-24   85.9   0.6    1.2e-24   85.9   0.6    2.1  2  Myb_DNA-bind_7   Myb DNA-binding like
     0.0022   18.2   0.0     0.0046   17.1   0.0    1.5  1  Myb_DNA-binding  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> Myb_DNA-bind_7  Myb DNA-binding like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.4       1.2   1.1e+04      83      83 ..     220     220 ..     193     235 .. 0.53
   2 !   85.9   0.6   1.4e-28   1.2e-24       2      80 ..     380     460 ..     379     468 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.2
  Myb_DNA-bind_7  83 k 83 
                     +
      KHJ32117.1 220 N 220
                     1 PP

  == domain 2  score: 85.9 bits;  conditional E-value: 1.4e-28
  Myb_DNA-bind_7   2 frkrkktkkWskeetekFYkaLsqfGtDFsliaklfpkrtrrqlKlKFkkEerknpeliekalkkrke..ldleefkeeae 80 
                     + kr+++++W+   +e+F+k+L++fGtDF++iak+fp+r+rrq+KlKF+ Eer+np+++++ l+  k   +dl+ef++  +
      KHJ32117.1 380 YLKRERSQHWDIPSNELFWKGLRMFGTDFEMIAKMFPHRSRRQIKLKFNAEERSNPQKVNRVLMGIKTeeIDLDEFQRLGN 460
                     889***********************************************************775332259*999998755 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   5.1e-07    0.0046      10      43 ..     395     428 ..     394     429 .. 0.94

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 5.1e-07
                      HHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHH CS
  Myb_DNA-binding  10 elLleavkkhGnrWkkIaerlggRtekqcrsrwr 43 
                      el+ ++++++G +++ Ia++++ R++ q++++++
       KHJ32117.1 395 ELFWKGLRMFGTDFEMIAKMFPHRSRRQIKLKFN 428
                      6788999*************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1330  (0.0741815); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3393.18
//
Query:       KHJ32118.1  [L=484]
Description: putative protein stb3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-33  113.7   0.0    7.3e-33  112.5   0.0    1.6  1  Stb3       Putative Sin3 binding protein


Domain annotation for each model (and alignments):
>> Stb3  Putative Sin3 binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.5   0.0   4.1e-37   7.3e-33       1      84 [.     213     302 ..     213     307 .. 0.93

  Alignments for each domain:
  == domain 1  score: 112.5 bits;  conditional E-value: 4.1e-37
        Stb3   1 itpeklakahlpeillekGPlaiRhitaalttsvpgFsklspskaRRlvvaalegr......adkendvvfekvGWGrWdakkvgepere 84 
                 itp+ la++hlp il+++GPlaiRhi++ lt++vpgFs+++p+k RRlvv+ale +      ++ e  v+fekvGWGrW+a+  g++ +e
  KHJ32118.1 213 ITPALLARYHLPGILIKHGPLAIRHIMSFLTSAVPGFSRIPPAKSRRLVVSALERQvseyvkGEFECGVIFEKVGWGRWNARLSGRSGSE 302
                 8******************************************************9999998888899**************98876555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3366.59
//
Query:       KHJ32119.1  [L=340]
Description: putative duf1295 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-41  141.5  11.2    3.6e-41  141.2  11.2    1.1  1  DUF1295   Protein of unknown function (DUF1295)


Domain annotation for each model (and alignments):
>> DUF1295  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.2  11.2     2e-45   3.6e-41       2     235 .]      68     319 ..      67     319 .. 0.90

  Alignments for each domain:
  == domain 1  score: 141.2 bits;  conditional E-value: 2e-45
     DUF1295   2 flislltkssslvDvlwgvlfvilavltlll..sea.aklrrllvllLvvlWglRLalhllrr.tlkkg.eDkryeelrkelgkt.iallsllvvfvlQ 94 
                 +l+s + ++ sl+D  w++l+ i  ++ +++   ++ ++ r  ++++  v+W++RL+++++r+  + kg +D+r++ lrk +  +  +  + +++ ++Q
  KHJ32119.1  68 YLVSEVNGNVSLIDQSWSILPSIYNIHYVTYarLSGlNTKRLEVLVFVSVIWSIRLTYNFYRKgGYSKGsDDYRWDILRKMISPSlFVVFNIIFISLIQ 166
                 899************************9999884555999999999999**************9999999***********99885555566668899* PP

     DUF1295  95 avllylvalpvllaaaske.eqalkaldviglalwlvgivlealaDqQlsaf..................kkdpankgkvldsGLwrysRHPNYfgeal 174
                  +ll+l++ p++l+    + +++++++d++ + ++l  iv e++aDqQ++++                  ++d++ +g ++ +GLw+ sRHPN+++e+ 
  KHJ32119.1 167 SLLLFLITAPTYLMLLVTPfTESITVADYVFASVLLALIVYEYIADQQQWHYqvakkiynetarvtreytQQDLE-RG-FVVTGLWSKSRHPNFLAEQA 263
                 ************998866625599******************************************977555555.44.7889**************** PP

     DUF1295 175 iWwglflialealeglealaiagpllltlllvfvsgipllEkkalkkykdkeeyreYqkkt 235
                 iW+ +++ +  +++++ +++ +g  ++ +l++f++++  +Ek +  ky+   ey+eYqk++
  KHJ32119.1 264 IWVVFYVWGSWTSHKYINWSSVG--VISYLILFQGSTSFTEKITAAKYR---EYKEYQKSV 319
                 *********999999999*9999..9999999*********99999995...9****9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       782  (0.0436165); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2400.10
//
Query:       KHJ32120.1  [L=614]
Description: putative dna topoisomerase iii [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   5.3e-104  348.5   0.0    3.5e-98  329.3   0.0    2.0  2  Topoisom_bac     DNA topoisomerase
    1.1e-10   41.7   0.0    2.1e-10   40.7   0.0    1.5  1  Toprim           Toprim domain
  ------ inclusion threshold ------
       0.73   10.5   6.9        1.5    9.5   6.9    1.4  1  FXMRP1_C_core    Fragile X-related 1 protein core C terminal


Domain annotation for each model (and alignments):
>> Topoisom_bac  DNA topoisomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  329.3   0.0  5.9e-102   3.5e-98       3     362 ..     112     477 ..     110     485 .. 0.92
   2 !   17.3   0.0   3.2e-07    0.0019     364     412 ..     530     581 ..     523     582 .. 0.87

  Alignments for each domain:
  == domain 1  score: 329.3 bits;  conditional E-value: 5.9e-102
  Topoisom_bac   3 nenlvdaaeaRrelDwliGinlsrlltkklk...........g.kkvlsaGRVqtptLaliveRereienFvpeeyweveatl.kkekkekekkkkk 86 
                   ++++vda+ aR e+D++iG +++r+lt++l+           g ++v+s+G +q ptL+++v+R+   +nFvpe++w++++t+  ++++     +k+
    KHJ32120.1 112 DDRQVDAVSARIEIDLRIGLAFTRYLTLTLRplgealsrspdGkNRVISYGSCQFPTLGFVVDRYFRVRNFVPEKFWSIKVTHhRDNTDV---IFKW 205
                   7899************************444445555555542599************************************73333333...59** PP

  Topoisom_bac  87 kkerikdkeeaeaileklkkk.eakvesvekkekkkppplpfdtttLqkeasrklglsakktlsiaqkLYekaglitYpRTdstrlseeaelkaile 182
                   k++r++ +e +  ++e++    +akv++v++k ++k++plp++t+++qk asr l+++ ++++++a++LY+k g+i+YpRT+++r+++ ++l+a++e
    KHJ32120.1 206 KRNRLFRREVVVILYERCLAAkTAKVVKVQEKPTSKWKPLPLTTVEFQKMASRFLQMNGQEAMNYAEALYQK-GFISYPRTETDRFDSAFNLRALVE 301
                   ******************9955*************************************************8.****************99****** PP

  Topoisom_bac 183 alakkygkeylefaekllkktkkksvvknkkveaHeAIrPteelpklkelsddekklYelIvrrflaslmkdakyeettvkleveeeefkasgktil 279
                   ++ ++  +++ ++++ ll+    +  +++++++aH++I+P++ ++  ++l+ +e+++Ye+I+rrfla++++dak + t++++e +ee f+a g ++l
    KHJ32120.1 302 KQVQD--SRWGSYSQGLLNGAFVQPRQGRNDDKAHPPIHPVTWVSP-SSLTPQEARVYEFIARRFLACCSDDAKGQATNIEIEYGEEIFDAHGVVVL 395
                   **996..7799999999997766655555566*********88885.89************************************************ PP

  Topoisom_bac 280 ekGfkkvykeekkeeeeeelpelkegeevkvkeveleekkTkppkryteasLikamekagiGtpaTraeiieklvergYverk 362
                    ++++ vy++ek++ + + lp+++ ge+++ +e+ ++e+kT++p ++te +Li++m+ +giGt+aT+ae+i k++ergYv  +
    KHJ32120.1 396 ARNYLDVYPYEKWNST-TILPKFTMGEIFQPTEAMITEGKTTAPGYLTEPDLISLMDANGIGTDATMAEHIAKIKERGYVFTR 477
                   *********9999988.5**************************************************************874 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 3.2e-07
  Topoisom_bac 364 kslvptelGkalvellekf...kdlvspelTaeleekLdeIaegkadakevl 412
                   ++++p++lG alv++++++    +l +p l++e+e ++++I eg++++++vl
    KHJ32120.1 530 EEFIPSTLGVALVDGYDRMgfeTSLSKPFLRKEMELRMKDICEGRITRDAVL 581
                   689*************55543666************************9997 PP

>> Toprim  Toprim domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.7   0.0   3.5e-14   2.1e-10      25     103 .]       1      96 [.       1      96 [. 0.80

  Alignments for each domain:
  == domain 1  score: 40.7 bits;  conditional E-value: 3.5e-14
                 EEEESSSSEEEHS......TTEEEEE..............ECTTTHHHHHH.HHHHHHHHSEEEEECSSSHHHHHHHHHHHHHHTHHHTT.TEEEEEES CS
      Toprim  25 vtaslGhildlet......efkpvye..............eiedkkkvlka.lkelakradeiilatDpDreGeaiawellevlkellen.kigrvefs 101
                 +t+++Gh+++  +            e              +i+  kk +++ + ++++ a+ ++++tD+DreGe+i+ e+++ + +++ n  i r++fs
  KHJ32120.1   1 MTSVSGHLTEARFpddyknW-----EypppeslfdapvrvVIDASKKSIATnITQNSRGAKVLFIWTDCDREGEHIGGEIRTEALKGNANlLIWRARFS 94 
                 799*********96555540.....145555666677789666666666555*****************************999989999899999998 PP

                 SS CS
      Toprim 102 ei 103
                 +i
  KHJ32120.1  95 NI 96 
                 76 PP

>> FXMRP1_C_core  Fragile X-related 1 protein core C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   6.9   0.00024       1.5      38      92 ..     468     525 ..     454     535 .. 0.47

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00024
  FXMRP1_C_core  38 dkekgystDe..esgessssslggsrsy.sgRGrGr.RGagatsgkygtnseasnaset 92 
                     ke+gy+     ++++s  +++   +++ +gRGrGr RG+g   g +g++ e+  +s  
     KHJ32120.1 468 IKERGYVFTRprGVNNSGMNDENEIQTRaNGRGRGRgRGRGGRGG-RGSRGENTSNSTR 525
                    466666665411233332223332333345666666655555444.3333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (614 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       452  (0.0252106); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 4368.35
//
Query:       KHJ32121.1  [L=116]
Description: hypothetical protein EV44_g3269 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       580  (0.0323498); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 865.26
//
Query:       KHJ32122.1  [L=327]
Description: hypothetical protein EV44_g4978 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0022   17.8   2.0     0.0038   17.0   2.0    1.4  1  zf-CCHC_2  Zinc knuckle
  ------ inclusion threshold ------
       0.82    9.9   2.6        1.3    9.2   2.6    1.4  1  zf-CCHC    Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   2.0   4.3e-07    0.0038       5      20 ..     163     178 ..     163     179 .. 0.95

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 4.3e-07
   zf-CCHC_2   5 vChiCgkkGHyIqdCP 20 
                 +C +C  kGHy++ CP
  KHJ32122.1 163 KCTRCARKGHYFKICP 178
                 7*************** PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.6   0.00015       1.3       1      18 []     162     179 ..     162     179 .. 0.93

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00015
                 SCTSSSSSSSSTTTTSTS CS
     zf-CCHC   1 rkCynCGepGHiardCpk 18 
                 +kC +C + GH+ + Cp+
  KHJ32122.1 162 GKCTRCARKGHYFKICPS 179
                 59**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       877  (0.0489152); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2567.27
//
Query:       KHJ32123.1  [L=184]
Description: hypothetical protein EV44_g3225 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       355  (0.0198003); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 1296.76
//
Query:       KHJ32124.1  [L=812]
Description: putative stress activated map kinase interacting protein sin1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.7e-45  153.5   0.0    7.4e-45  152.6   0.0    1.5  1  CRIM         SAPK-interacting protein 1 (Sin1), middle CRIM d
    7.6e-34  116.3   0.0    1.9e-33  115.0   0.0    1.7  1  SIN1_PH      SAPK-interacting protein 1 (Sin1), Pleckstrin-ho
  ------ inclusion threshold ------
       0.04   14.3   1.8       0.15   12.5   1.2    2.2  2  PBP1_TM      Transmembrane domain of transglycosylase PBP1 at
       0.08   13.0   0.1        0.2   11.7   0.1    1.6  1  RBD          Raf-like Ras-binding domain
       0.12   12.6   0.1       0.41   10.9   0.1    1.9  1  TUG-UBL1     TUG ubiquitin-like domain
        1.1    7.8   7.6        1.9    7.0   7.6    1.3  1  TFIIF_alpha  Transcription initiation factor IIF, alpha subun


Domain annotation for each model (and alignments):
>> CRIM  SAPK-interacting protein 1 (Sin1), middle CRIM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.6   0.0   2.5e-48   7.4e-45       1     141 []     332     491 ..     332     491 .. 0.98

  Alignments for each domain:
  == domain 1  score: 152.6 bits;  conditional E-value: 2.5e-48
                 S--SSS---SSSS-SSSCCCCCGCCTTTT.-T-EEECCE-TT-SSTTS.---CCC-..........SSSCTCCCCCCCCCCCHCHT-SS-SS...SCGG CS
        CRIM   1 kSlLsalLeakkeksenpleeyaalsgkgessslklkiyvpfskkpsvkplevkvr..........kdatvaevIGlaLykyveekrepeldeeleeek 89 
                 kSlLsa+++akk+k+++p+e+ya+lsg++es++l+l+i++pfs++p+ + +ev +r          +++tv ++IGl+L+ky eek ep+l+    eek
  KHJ32124.1 332 KSLLSAAIKAKKTKASMPFESYASLSGQAESNPLNLRIWAPFSTSPT-NRFEVLIRrnvqengigdRQVTVVDLIGLSLWKYGEEKLEPNLP----EEK 425
                 7****************************99****************.68******************************************....799 PP

                 CSTTCCEECCE-CT--EECCCCCC-TTSCCHHH-...............BSEEEEEE-SCHHHCCHC CS
        CRIM  90 lnvnrwtLriveeDgevdedFPaldrtrpiskfs...............fdelaLveaseeeveene 141
                 ln+nrwtLr+v eD+evd+dFPaldr +p+ +fs               +de+aLvea++ee++en+
  KHJ32124.1 426 LNINRWTLRLV-EDEEVDYDFPALDRAKPVVAFStannraarsrsgskpYDEFALVEATDEEFAENQ 491
                 ***********.6****************************************************97 PP

>> SIN1_PH  SAPK-interacting protein 1 (Sin1), Pleckstrin-homology
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.0   0.0   6.3e-37   1.9e-33       2     108 ..     704     806 ..     703     808 .. 0.94

  Alignments for each domain:
  == domain 1  score: 115.0 bits;  conditional E-value: 6.3e-37
     SIN1_PH   2 lyksyrvyikqkm..laksevtLaIdgekieidpvknkkkatkfwaksqKtvsyhidsvvhckiserksskalfrivvkksssefKrydfeadsakeAe 98 
                 +y++y v++kq+m  ++ +e++L+Idge+++i+p++++k+   ++  ++Kt+++h++++v+cki++r++s  +f++v+ + ++e+Krydfea++++eA+
  KHJ32124.1 704 NYRKYIVWRKQPMrfVGMNERLLVIDGEYLHIMPASTGKT---LFDGQGKTTTVHFSNIVGCKITRRHPS--NFKVVIFR-QTETKRYDFEAKNSDEAA 796
                 7************9999********************874...45667**********************..********.****************** PP

     SIN1_PH  99 eIvnkinkil 108
                 eIv +ink +
  KHJ32124.1 797 EIVFEINKGI 806
                 *******987 PP

>> PBP1_TM  Transmembrane domain of transglycosylase PBP1 at N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.2   4.9e-05      0.15      25      70 ..     110     155 ..      99     158 .. 0.87
   2 ?   -1.7   0.0       1.3   3.9e+03      21      56 ..     460     494 ..     455     506 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.9e-05
     PBP1_TM  25 asrrrrrdddyddeyddeedDdddddeeeevprkgkkkkpprkkrr 70 
                 +++r+ r++++++e + +  D+ dd+ e+ ++++ k +k p ++r+
  KHJ32124.1 110 VTKRKSRQEQIQEEDSSDISDESDDETEQASTQRIKFSKMPIRRRS 155
                 67889999999998899999999999********999999988885 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.3
     PBP1_TM  21 arkkasrrrrrdddyddeyddeedDdddddeeeevp 56 
                 a ++a+r r     yd+    e  D ++  e++++p
  KHJ32124.1 460 ANNRAARSRSGSKPYDEFALVEATD-EEFAENQKIP 494
                 5678888888899999933333333.3455555554 PP

>> RBD  Raf-like Ras-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   6.8e-05       0.2      11      47 ..     586     622 ..     584     638 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 6.8e-05
         RBD  11 rtvvevkpgetvrdaLekalkkRglnpsacaVylkgs 47 
                  ++  v ++  + d+L+ ++kkR+l+ +a+++  +g+
  KHJ32124.1 586 MVTLDVTTDTYLVDVLDIICKKRQLDKAAHVLKISGT 622
                 5666777778889*******************99984 PP

>> TUG-UBL1  TUG ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00014      0.41       8      40 ..     587     618 ..     584     632 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00014
    TUG-UBL1   8 fkvkvtpnttlndvLeeackkfklddsasytLk 40 
                 ++  vt  t+l dvL+  ckk +l d+a + Lk
  KHJ32124.1 587 VTLDVTTDTYLVDVLDIICKKRQL-DKAAHVLK 618
                 67889*******************.78899999 PP

>> TFIIF_alpha  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   7.6   0.00064       1.9     339     445 ..     109     209 ..      76     245 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00064
                  XXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXX...XXXXXXX CS
  TFIIF_alpha 339 kakklkkkkkekdkkdSddeedsddsDideedsvslvkakKkkekkkeekvdsnessagnsrparpspeqkdskskrkaaseeskspvsvpaKklkte 436
                     k k+++++++++dS ++ +++++D  e++s+  +k +K    +  ++ +s++   +n r ++  + ++++ +++     es+  +     +++t+
   KHJ32124.1 109 VVTKRKSRQEQIQEEDS-SDISDESDDETEQASTQRIKFSK---MPIRRRSGSSPIRGSNLRLSSTITPHSNTPATQER--RESQPLIGISIARMRTD 200
                  45677899999988888.55555555555555555566665...56788888999999999988887777776666655..57888888889999999 PP

                  XXXXXXXXX CS
  TFIIF_alpha 437 napkssskk 445
                  +   s+   
   KHJ32124.1 201 TITSSEISS 209
                  988666444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (812 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       881  (0.0491383); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 5712.96
//
Query:       KHJ32125.1  [L=360]
Description: hypothetical protein EV44_g5690 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.2e-36  124.8   6.8    2.6e-35  123.2   6.5    2.0  1  PRCC           Mitotic checkpoint regulator, MAD2B-interactin
  ------ inclusion threshold ------
       0.14   12.0   0.5        6.1    6.8   0.0    2.5  2  HTH_Tnp_Tc3_1  Tc3 transposase


Domain annotation for each model (and alignments):
>> PRCC  Mitotic checkpoint regulator, MAD2B-interacting
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.2   6.5   2.8e-39   2.6e-35      13     214 .]     186     360 .]      23     360 .] 0.79

  Alignments for each domain:
  == domain 1  score: 123.2 bits;  conditional E-value: 2.8e-39
        PRCC  13 ssaaaksaptisyeplvssapeaeeseeedppetepepasqpeaenadleakkaaksseamvpepteqdpvkensknypgyyllpsg............ 99 
                 +++ +++ p+is++pl ++ +                                                                              
  KHJ32125.1 186 NKSNSEKLPKISLFPLATEIK-----------------------------------------------------------------Ergsspkkesyqp 219
                 222222333333333333333.................................................................0222222222223 PP

        PRCC 100 ..............................sqqpqe...dasdlnlddealrqLlGrrggnrkreeikeakiieinedeelkaneqwlakalteekaek 165
                                               s+++++   +a++l+l+d+++rqLlGr++g  +++++++ ++i++n+d+e+++ne+ +a+++ +     
  KHJ32125.1 220 ilygvsnttnvdsndinledehqenisiprSPPSSSlslIADSLHLSDSERRQLLGRQKG--NSKSAMATNVINFNTDAEYQHNEEIRATGEKTV---- 312
                 333333334444444445555555556665333444679*******************66..88999999*********************6666.... PP

        PRCC 166 kgnpvrgqakrKHQltyLahqAkeneeeLeeswAenrrnRkqaqaKYGF 214
                   npvr++a++KH+l++L+h+A++++++Lees+A++++nR++a+++YG+
  KHJ32125.1 313 -NNPVRAIAPGKHSLKQLIHAAQSQKDALEESFAKGKSNRAEAGSRYGW 360
                 .9*********************************************** PP

>> HTH_Tnp_Tc3_1  Tc3 transposase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1     0.013   1.1e+02       3      21 ..       9      27 ..       8      31 .. 0.84
   2 ?    6.8   0.0   0.00067       6.1       5      28 ..     265     287 ..     263     291 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.013
                   ----HHHHHHHHHHHHTT- CS
  HTH_Tnp_Tc3_1  3 saLSDtEraillvmkllnv 21
                   s LSD E+  l+ +k +  
     KHJ32125.1  9 SDLSDKEQQNLEIIKSSTF 27
                   67*********99998865 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.00067
                    --HHHHHHHHHHHHTT--HHHHHH CS
  HTH_Tnp_Tc3_1   5 LSDtEraillvmkllnvklsEiar 28 
                    LSD Er +ll+ ++ n+k s +a+
     KHJ32125.1 265 LSDSERRQLLGRQKGNSK-SAMAT 287
                    9**********9999988.56666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2522.27
//
Query:       KHJ32126.1  [L=586]
Description: hypothetical protein EV44_g3759 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0074   16.5   0.3      0.017   15.3   0.3    1.5  1  rve       Integrase core domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.3   9.3e-07     0.017      26     117 ..      45     148 ..      30     149 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 9.3e-07
         rve  26 llvvvddfsrlilaealsde....mdastvlalleravarfggve........pervlsDngseytskafrefladlgirvsftrpgrpqdnGkvErfh 112
                 +++ vd +s ++ + ++s      ++++ vla+ ++  a +g+ +         + + s   s+++s++f + ++++ i+    ++   ++ G+vEr h
  KHJ32126.1  45 FIARVDNCSSWVATACVSCTaaifSTTAFVLAAERVSTAARGWTRpalltdfwTRLLESRTRSSFVSREFNQRASSMAITAMSVPVEAHWSIGLVERYH 143
                 55668999999888888888788889999999999999999998899999999999999999************************************* PP

         rve 113 rtlkd 117
                 +tl++
  KHJ32126.1 144 HTLRR 148
                 ***97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (586 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       523  (0.0291706); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 4154.13
//
Query:       KHJ32127.1  [L=467]
Description: putative gdp-fucose transporter protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3620.03
//
Query:       KHJ32128.1  [L=433]
Description: hypothetical protein EV44_g4835 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       619  (0.0345251); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3114.48
//
Query:       KHJ32129.1  [L=138]
Description: putative translation initiation factor eif1a-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-17   61.1   0.0    9.7e-17   60.5   0.0    1.4  1  eIF-1a    Translation initiation factor 1A / IF-1


Domain annotation for each model (and alignments):
>> eIF-1a  Translation initiation factor 1A / IF-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.5   0.0   5.4e-21   9.7e-17       2      61 ..      26      90 ..      25     100 .. 0.85

  Alignments for each domain:
  == domain 1  score: 60.5 bits;  conditional E-value: 5.4e-21
                EEEEEEEEEETTTEEEEEE.SS..SSBEEEEE-HHHHCT----TT-EEEEEE-TT-TT....EEEE CS
      eIF-1a  2 evigkViealgnnlfrVelpdn..gkevlaeipgkfRnkiwikrGdyVlVelspydlt....kGrI 61
                ++i+++ +a+gnnl+ + lp n    +vl+e+p +fRn iw krG+yVl+++ + +       G+I
  KHJ32129.1 26 QSIARIFQAEGNNLYLCSLP-NksDTRVLVELPSRFRNAIWLKRGNYVLIDTKEASSRhnkiYGEI 90
                89******************.622457*************************77655455555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       326  (0.0181828); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1112.64
//
Query:       KHJ32130.1  [L=433]
Description: putative glycosyltransferase family 58 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.9e-140  467.3  19.9   4.7e-140  467.1  19.9    1.0  1  ALG3      ALG3 protein


Domain annotation for each model (and alignments):
>> ALG3  ALG3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  467.1  19.9  2.6e-144  4.7e-140       2     358 .]      35     397 ..      34     397 .. 0.95

  Alignments for each domain:
  == domain 1  score: 467.1 bits;  conditional E-value: 2.6e-144
        ALG3   2 llllleavllvliikkvpYTeIDwkaYmqqvelflngerdYsklkGdtGPlvYPagfvyiysllysltdegenirlaQviFavlylltlllvlaiyaka 100
                 ++ll++a+l+ lii kv+YTeIDw+aYm+q+e++++gerdY+k+kG+tGPlvYPa++vyiy +ly+ t++g+ni laQv+F +ly++t+++v+a+y++a
  KHJ32130.1  35 IILLADALLCCLIIFKVSYTEIDWTAYMEQIEMVVRGERDYTKIKGGTGPLVYPAAHVYIYWILYQTTSQGKNILLAQVLFGFLYVATITIVMACYKQA 133
                 6899*********************************************************************************************** PP

        ALG3 101 kvppyvlvllvlskRlhSiyvLRlFNDcvavlllvlaillllkkrwtlgsvlyslavsvKmnvllflPalllllllkegllktlaallvialvqvllgl 199
                 k+p y++++lvlskRlhSi++LRlFNDc+av++l++ai+l+++kr+tl+s++ysl++++Km++ll +Pa+ ++l+l++g+l++l+++++i+++q++l++
  KHJ32130.1 134 KAPVYIFPMLVLSKRLHSIFLLRLFNDCFAVFFLWVAIYLFQRKRHTLASLAYSLGLGIKMSLLLPFPAIGVILFLTKGVLGSLIQIWLIIQLQLILAI 232
                 *************************************************************************************************** PP

        ALG3 200 pFlltnpveYlkraFdlsrqFlykwtvNwrflseevFlskefalaLLllhllllllfaltrwlkskakl......eavekkllkklkkkkeskelsael 292
                 pF+++n++ Y+++aF++sr+F +kwtvNwrfl e++Fl+++f++aLL+ hl+++++fal rwl+++++       + ++ + +   +++++s+++ ++ 
  KHJ32130.1 233 PFISSNAIGYFNKAFEFSRTFNFKWTVNWRFLGEKIFLDRKFSIALLIGHLCTVVTFALSRWLRPNQEPvrgvirNLLKLQVSFGKSQSAISSRADPNF 331
                 *****************************************************************9744333332222333333344588899999*** PP

        ALG3 293 illvlftsnliGivfarsLHYQFyswyfhslplllwstklslvlkllllllieyawnvyPstelsS 358
                 il++++++n iG +farsLHYQF+++++   p+l+w+++l+++l+++l++l+e+awnvyPst+lsS
  KHJ32130.1 332 ILTTILSANAIGFLFARSLHYQFFAYIALGSPFLFWRAGLHPTLQYFLWALQEWAWNVYPSTHLSS 397
                 ****************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       563  (0.0314016); expected 358.6 (0.02)
Passed bias filter:                      217  (0.0121033); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.21s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 3483.99
//
Query:       KHJ32131.1  [L=384]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 3210.05
//
Query:       KHJ32132.1  [L=326]
Description: putative pre-rrna processing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-47  160.0  25.2      5e-47  160.0  25.2    1.8  2  RRP36     rRNA biogenesis protein RRP36
  ------ inclusion threshold ------
       0.03   14.0   0.9      0.048   13.4   0.9    1.3  1  DUF1848   Domain of unknown function (DUF1848)


Domain annotation for each model (and alignments):
>> RRP36  rRNA biogenesis protein RRP36
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.4      0.22     2e+03      95      95 ..      82      82 ..      37     138 .. 0.55
   2 !  160.0  25.2   5.6e-51     5e-47       1     166 []     153     316 ..     153     316 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.22
       RRP36 95 e 95
                +
  KHJ32132.1 82 D 82
                1 PP

  == domain 2  score: 160.0 bits;  conditional E-value: 5.6e-51
       RRP36   1 rkskhaPtevsskkpvsrkrevvkvkkkksrDPRFdslsgeldedlfeknYaFLdeyrekEleelkkelkkekdkeeekeelkrelqrlesrekerekk 99 
                 r + haP+e++skk+v+r+revv  k +++rDPRF++l  +l++ +  k+Y+FLd+yre+E+++lk ++k++k+  eeke+lk++l  +es++k++ +k
  KHJ32132.1 153 RPNTHAPSEMTSKKAVTRRREVVTIKTRQARDPRFEPLGDSLQAITLTKAYSFLDNYRETEMKDLKVAIKQTKN-VEEKEKLKKTLLIMESKKKAKLRK 250
                 6799******************99899999********************************************.************************ PP

       RRP36 100 ererevlkelkkeekekvkegkkpfflkksekkklllkekfeelkkkkklekaierkrkKnasKekk 166
                  +e+e+ ++++k+ek++vk+gkkpf+lkkse+kk++l ++f+ l k+kkl+++ier+rkK  +++kk
  KHJ32132.1 251 LKEQEIIDQHRKQEKALVKQGKKPFYLKKSEQKKQILLDQFNGL-KGKKLDRVIERRRKKLEGRQKK 316
                 ********************************************.9******************998 PP

>> DUF1848  Domain of unknown function (DUF1848)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.9   5.3e-06     0.048     107     212 ..     161     263 ..     153     298 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 5.3e-06
     DUF1848 107 eklgkerviwRyDPilltekltvelhlekfeklaeelkgytekvviSfvdlykkvkrnlkkklelrelse.eekeelaeelaeiakklglelatCaeke 204
                 e+++k++v+ R + + ++++        +fe l+++l+ +t +   Sf+d y++++ +  k + ++++++ eeke+l ++l  + +k + +l+   e+e
  KHJ32132.1 161 EMTSKKAVTRRREVVTIKTRQAR---DPRFEPLGDSLQAITLTKAYSFLDNYRETEMKDLK-VAIKQTKNvEEKEKLKKTLLIMESKKKAKLRKLKEQE 255
                 55666666666666555555333...369*************************9966534.4555544315566777777777777777777777777 PP

     DUF1848 205 dlselgie 212
                  +++ + +
  KHJ32132.1 256 IIDQHRKQ 263
                 66665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2374  (0.132411); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2267.38
//
Query:       KHJ32133.1  [L=723]
Description: putative molecular chaperone [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-35  122.1   0.0    3.2e-35  120.9   0.0    1.7  1  ABC1      ABC1 family
  ------ inclusion threshold ------
       0.12   11.7   2.9       0.25   10.7   0.0    2.6  3  Pkinase   Protein kinase domain


Domain annotation for each model (and alignments):
>> ABC1  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.9   0.0   3.6e-39   3.2e-35       1     118 [.     394     511 ..     394     512 .. 0.95

  Alignments for each domain:
  == domain 1  score: 120.9 bits;  conditional E-value: 3.6e-39
        ABC1   1 eelgkkleeiFaefdeePiAaASiaqVhrAklk.sgeeVavKvqrpgvkkriksDlellkllakllkkflkelrldleelvdefskslleEldferEAk 98 
                 e+lg+++++iF++fde PiAaASi+qVhrA+lk +g eVavKvq+pgv+k+i+sDl++l++l+++ k ++k+l   l++++++++ +l++E+d+ rEA+
  KHJ32133.1 394 EDLGSDWRQIFSSFDEIPIAAASIGQVHRAVLKsNGVEVAVKVQYPGVSKSIDSDLKNLEILLTASKLLPKGLY--LDKTIANARIELAWECDYIREAE 490
                 589******************************88***************************************..*********************** PP

        ABC1  99 naekfrenfaklk.evkvPkv 118
                  a +f++ +++   ++ vPkv
  KHJ32133.1 491 CARRFEQYLHEELeTFVVPKV 511
                 ******998765427*****9 PP

>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.3      0.15   1.4e+03     200     262 ..      72     133 ..      53     135 .. 0.71
   2 ?   -0.3   0.0     0.064   5.7e+02      11      33 ..     416     438 ..     412     459 .. 0.81
   3 ?   10.7   0.0   2.8e-05      0.25      67     151 ..     513     595 ..     466     608 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.15
                 SSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSG CS
     Pkinase 200 ekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhp 262
                 e+++++ e+ +d l++++ ilg  k ++ +  +is+e+k+ +++  +   ++  t ee l++p
  KHJ32133.1  72 ENRDKTSEATVDSLKNSQSILGS-KSSTSNSGSISDEIKSSIERKSNNSLNSSSTSEEQLKQP 133
                 45666677788888888888876.777778888899988888877777777777766666666 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.064
                 SSEEEEEEEETTTTEEEEEEEEE CS
     Pkinase  11 sfGkVykaveketgkivAvKkik 33 
                 s G+V +av k++g +vAvK+  
  KHJ32133.1 416 SIGQVHRAVLKSNGVEVAVKVQY 438
                 579*****************865 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 2.8e-05
                 EEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHH.HHHHHHHTTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSS CS
     Pkinase  67 feekdelylvleyveggeladllerkgslseeeakkiakqile.gleylHskgiiHrDlKpeNiLid.ekgelKitDFGlakeless 151
                  e + + +l  e+++g  ++++     +ls+e+   i +qil+  l+ + + +++  D    N+L++ e+ +l + DFG ++e++++
  KHJ32133.1 513 SEASGKQVLTSEFMNGVAITKIK----NLSQEQKDWIGTQILRlCLREIIEFRFMQTDPNWTNFLYNqETHKLELLDFGASREYSQD 595
                 33466778999999988555555....59999999999999986899********************66677***********9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (723 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1279  (0.0713369); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 4950.67
//
Query:       KHJ32134.1  [L=361]
Description: hypothetical protein EV44_g5470 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00037   20.7   1.9     0.0005   20.3   0.3    2.1  2  Retrotrans_gag  Retrotransposon gag protein
     0.0007   19.6   0.8     0.0007   19.6   0.8    1.6  2  zf-CCHC         Zinc knuckle
     0.0014   18.4   1.0     0.0014   18.4   1.0    1.7  2  zf-CCHC_2       Zinc knuckle
     0.0047   16.6   1.6     0.0085   15.8   1.6    1.4  1  zf-CCHC_5       GAG-polyprotein viral zinc-finger
  ------ inclusion threshold ------
      0.012   15.4   0.0      0.027   14.3   0.0    1.5  1  DUF4939         Domain of unknown function (DUF4939)
       0.06   13.1   0.0       0.13   12.0   0.0    1.5  1  HD_2            HD containing hydrolase-like enzyme
       0.13   12.6   0.1       0.52   10.6   0.0    1.9  2  DUF4806         Domain of unknown function (DUF4806)


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       4.8   1.2e+04       6      19 ..      28      41 ..      26      45 .. 0.77
   2 !   20.3   0.3   1.9e-07    0.0005      14      86 ..     124     194 ..     112     204 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 4.8
  Retrotrans_gag  6 slegaAkswlkslv 19
                    + ++ A sw++++ 
      KHJ32134.1 28 NINESAPSWASQIL 41
                    56788999999876 PP

  == domain 2  score: 20.3 bits;  conditional E-value: 1.9e-07
  Retrotrans_gag  14 wlkslvarsidasesWkdlkkaflktflpserkdqleeelsslrQgtesvreYvtrfktladqlde.vlteeak 86 
                     w++  + +++   ++ +++ +++ k   +s++  ++ ++l +++Qg++ +re+++ f++++ +++  +++++ k
      KHJ32134.1 124 WIEFAKNTER---FTVEEFLNRLDKAVGDSDKITKAINKLNTIKQGNRDFREFLQDFEQTILEAQGwGWDDQIK 194
                     4444444444...4999999*********************************************988888765 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       3.3   8.5e+03       8      11 ..      62      65 ..      61      66 .. 0.82
   2 !   19.6   0.8   2.7e-07    0.0007       3      17 ..     309     323 ..     307     324 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 3.3
                SSSS CS
     zf-CCHC  8 epGH 11
                +pGH
  KHJ32134.1 62 KPGH 65
                89** PP

  == domain 2  score: 19.6 bits;  conditional E-value: 2.7e-07
                 TSSSSSSSSTTTTST CS
     zf-CCHC   3 CynCGepGHiardCp 17 
                 C +CG+ GH+ rdCp
  KHJ32134.1 309 CLRCGGRGHMIRDCP 323
                 779***********9 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       1.6   4.2e+03      10      14 ..      61      65 ..      61      66 .. 0.85
   2 !   18.4   1.0   5.6e-07    0.0014       5      20 ..     308     323 ..     308     324 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.6
   zf-CCHC_2 10 gkkGH 14
                +k+GH
  KHJ32134.1 61 QKPGH 65
                69*** PP

  == domain 2  score: 18.4 bits;  conditional E-value: 5.6e-07
   zf-CCHC_2   5 vChiCgkkGHyIqdCP 20 
                 +C +Cg  GH I+dCP
  KHJ32134.1 308 LCLRCGGRGHMIRDCP 323
                 5*************** PP

>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   1.6   3.3e-06    0.0085       3      18 ..     307     322 ..     305     323 .. 0.94

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 3.3e-06
                 -B-TTT-SSBS-TTT- CS
   zf-CCHC_5   3 glCpRCkkgkHwardC 18 
                 glC+RC+ + H  rdC
  KHJ32134.1 307 GLCLRCGGRGHMIRDC 322
                 9*************** PP

>> DUF4939  Domain of unknown function (DUF4939)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.1e-05     0.027      12      86 ..      53     128 ..      42     153 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.1e-05
     DUF4939  12 alprlrqkrrwrnpipfpetfdG.dtdrlpefivqtlsymlvdektfssdalkvtflitrltGealewvlpyikkd 86 
                 +  + +  +++    p+pe+f+G d    p+f     + + +d +   s+a kv +   rlt  a + + p+i+  
  KHJ32134.1  53 STRQPPCDQKPGHSQPHPEKFSGfDPTLYPQFRSLLEAKLQIDAEAIGSEAEKVWYGFGRLTDTASRRIHPWIEFA 128
                 445556778888999********556667****************************************9999843 PP

>> HD_2  HD containing hydrolase-like enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0     5e-05      0.13     119     165 ..     137     183 ..     111     187 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 5e-05
        HD_2 119 eeaeeeekklvkaaDklsalikcleelkagnkeFeeakkeieeklke 165
                 ee  +++ k v   Dk+   i  l+ +k+gn++F+e  ++ e+++ e
  KHJ32134.1 137 EEFLNRLDKAVGDSDKITKAINKLNTIKQGNRDFREFLQDFEQTILE 183
                 444467899999****************************9999866 PP

>> DUF4806  Domain of unknown function (DUF4806)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0    0.0002      0.52      12      53 ..     137     177 ..     134     195 .. 0.84
   2 ?   -1.6   0.0       1.4   3.5e+03      22      45 ..     211     234 ..     208     245 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.0002
     DUF4806  12 eeelerLEaavrtdekirqqyvnyLrkikgkkadlkkvfdkl 53 
                 ee l+rL++av  d++   + +n+L++ik+ + d+ ++++++
  KHJ32134.1 137 EEFLNRLDKAVG-DSDKITKAINKLNTIKQGNRDFREFLQDF 177
                 6779********.66668999********9999998888664 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.4
     DUF4806  22 vrtdeki.rqqyvnyLrkikgkkad 45 
                 v++de + ++++v++Lr++   k++
  KHJ32134.1 211 VSQDEPVgYEDFVSQLRRTFD-KME 234
                 666776668899999998775.444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 2754.22
//
Query:       KHJ32135.1  [L=323]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.037   14.1   0.5      0.037   14.1   0.5    3.0  3  zf-CCHC          Zinc knuckle
       0.12   12.4   0.0        1.2    9.2   0.0    2.5  3  Ribosomal_S13_N  Ribosomal S13/S15 N-terminal domain


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.9      0.92   8.3e+03       3       8 ..     199     204 ..     198     205 .. 0.81
   2 ?   14.1   0.5   4.1e-06     0.037       2      16 ..     216     230 ..     215     232 .. 0.91
   3 ?    5.4   1.6    0.0024        22       2       9 ..     235     242 ..     235     242 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.92
                 TSSSSS CS
     zf-CCHC   3 CynCGe 8  
                 C +C++
  KHJ32135.1 199 CKRCNR 204
                 999985 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 4.1e-06
                 CTSSSSSSSSTTTTS CS
     zf-CCHC   2 kCynCGepGHiardC 16 
                  C nCG++ H a  C
  KHJ32135.1 216 SCANCGSTNHTADIC 230
                 6***********999 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.0024
                 CTSSSSSS CS
     zf-CCHC   2 kCynCGep 9  
                 kC+nCG+p
  KHJ32135.1 235 KCRNCGGP 242
                 7*****86 PP

>> Ribosomal_S13_N  Ribosomal S13/S15 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00014       1.2      22      52 ..      41      69 ..      21      70 .. 0.86
   2 ?   -3.2   0.0      0.99   8.9e+03      21      33 ..     117     129 ..     113     133 .. 0.74
   3 ?   -0.7   0.0      0.17   1.6e+03      12      23 ..     184     195 ..     183     200 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00014
                     --TTS---HHHHHHHHHHHHHTT--HHHHHH CS
  Ribosomal_S13_N 22 apsWlklskeeveelivklakkGltpSqIGv 52
                      ++W kls+ ++ e ivk  k  ++pS IG 
       KHJ32135.1 41 GHEWRKLSPADIREVIVK--KLHISPSLIGR 69
                     579*************97..88999999996 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.99
                      S--TTS---HHHH CS
  Ribosomal_S13_N  21 eapsWlklskeev 33 
                      ++p+++k+++  v
       KHJ32135.1 117 TVPAFVKMEQGVV 129
                      7899999887655 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.17
                      ------S-SS-- CS
  Ribosomal_S13_N  12 SgSarPyrreap 23 
                      Sg +rPy++++p
       KHJ32135.1 184 SGVVRPYKKQKP 195
                      8889*****998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       807  (0.0450109); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.21s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2556.20
//
Query:       KHJ32136.1  [L=490]
Description: putative serine hydroxymethyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.2e-207  688.4   0.0   2.6e-207  688.2   0.0    1.0  1  SHMT             Serine hydroxymethyltransferase
    4.4e-05   22.8   0.0    0.00015   21.1   0.0    1.8  1  Aminotran_1_2    Aminotransferase class I and II
  ------ inclusion threshold ------
      0.016   14.5   0.0       0.04   13.2   0.0    1.6  1  Beta_elim_lyase  Beta-eliminating lyase


Domain annotation for each model (and alignments):
>> SHMT  Serine hydroxymethyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  688.2   0.0  4.3e-211  2.6e-207       2     399 .]      31     429 ..      30     429 .. 1.00

  Alignments for each domain:
  == domain 1  score: 688.2 bits;  conditional E-value: 4.3e-211
                 HHHTHHHHHHHHHHHHHHHHSEE-STT-----HHHHHHHTSGGGG----EETTEESSST-HHHHHHHHHHHHHHHHHCT-STTTEEEE---SSHHHHHH CS
        SHMT   2 eesdpevaeiikkekerqkeeieliasenftskavlealGsvltnkyaeGyPGkryyGGcefvdeveelaqdrakelfkldpakwgvnvqplsGsqanl 100
                  +sdpe+aei+k e +rq+e+i liasen+ts+av++alGs ++nky+eGyPG+ryyGG++++d++e ++qdra+++f+ldp+kwgvnvq+lsGs+anl
  KHJ32136.1  31 VDSDPEIAEIMKLEIKRQRESIILIASENVTSRAVFDALGSPMSNKYSEGYPGARYYGGNQHIDQIELMCQDRALKAFRLDPEKWGVNVQSLSGSPANL 129
                 689************************************************************************************************ PP

                 HHHHHHT-TT-EEEEESCTTTSTGGGT-BTSS-B-SHHHHHSEEEEE-B-TTTSSB-HHHHHHHHHHH--SEEEEE-SST-S---HHHHHHHHHHTT-E CS
        SHMT 101 avytallepgdrilgldladGGhlthGakveskkisassklfesveykvdketglidydelekkakefkPklivaGtsaysrlidyarlreiadevgay 199
                 +vy+a+++p+dr++gldl++GGhl+hG+++++kkisa+s++fe+++y+v+ etg+idyd+le++a  ++Pk++vaGtsay+rlidy r+r ia++v+ay
  KHJ32136.1 130 QVYQAIMKPHDRLMGLDLPHGGHLSHGYQTQTKKISAISTYFETLPYRVNLETGIIDYDRLEENALMYRPKVLVAGTSAYCRLIDYGRMRSIANKVDAY 228
                 *************************************************************************************************** PP

                 EEEE-GGGHHHHHTTSS--GCCTSSEEEEESSSTT-S-S-EEEEEC-SEEEEE.TTTEEEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHCTSHH CS
        SHMT 200 llvdmahiaGlvaagvipsPfeyadvvtttthktlrGprgglillrkgvksvd.ktgkevleelekkinsavfPglqGGPlnhviaakavalkealepe 297
                 l+vdmahi+Glva+gvipsPfeyad+vtttthk+lrGprg++i++rkgv+s d ktgk++l++le  in++vfPg+qGGP+nh+i+a+avalk+a++pe
  KHJ32136.1 229 LVVDMAHISGLVAGGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRKGVRSTDaKTGKQILYDLEGPINFSVFPGHQGGPHNHTITALAVALKQAATPE 327
                 *************************************************************************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTSSTTTT-SEEEEESHHHHHTT--HHHHHHHH CS
        SHMT 298 fkvyqkqvlknakalaealkekgyklvsgGtdnhlvlvdlrekgldGkraekvlekvnitankntvPgdksalvtsGlrlGtpaltsrgfkeedlekva 396
                 f++yq+q++knakal++++k++gyklv++Gtd+h+vl+dlr+++ldG+r+e+vle+vni++nkn++Pgdksal++ G+r+Gtpa+tsrgf+ ed+++va
  KHJ32136.1 328 FRTYQEQIIKNAKALESEFKKMGYKLVADGTDSHMVLLDLRPQKLDGARVEAVLEQVNIACNKNAIPGDKSALTPCGIRIGTPAMTSRGFGVEDFQRVA 426
                 *************************************************************************************************** PP

                 HHH CS
        SHMT 397 kfi 399
                 ++i
  KHJ32136.1 427 RYI 429
                 997 PP

>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   2.4e-08   0.00015      70     352 ..     118     413 ..     104     416 .. 0.66

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 2.4e-08
                    GEEEESHHHHHHHHHHHHHHHTTT-EEEEEESS-THH.HHHHHHTTSEEEEEEBEET........TTTEE-HHHHHHHHTTHHCTTE..TEEEEEE CS
  Aminotran_1_2  70 avvvgsGagaliealifllklnpgdeilvpdptyasy.knilrlsggevvryplyse........edfhldlealeealkeapegnk..ktkvilv 154
                    +v+ +sG+ a++++  +++k  p+d+    d+ ++ + +++ +  + ++  +++y e        e+  +d + lee       +    ++kv++ 
     KHJ32136.1 118 NVQSLSGSPANLQVYQAIMK--PHDRLMGLDLPHGGHlSHGYQTQTKKISAISTYFEtlpyrvnlETGIIDYDRLEE-------NALmyRPKVLVA 204
                    56666666666666666665..5555555554444432344444444455555554443344444444444444443.......222223344443 PP

                    ESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTTTCBSSSSHTHHHHGGSTTSTTEEEEEESSSTT.SSGGG-EEEEEEEH........HHHH CS
  Aminotran_1_2 155 esphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsldavatranveeepnllivgslsKaf.GlaGeRvGyilgna........avvs 241
                          t + + l ++  + ++a+k  ++l+vD+a+  +         +++   e+ + +++++  K++ G  G   ++i+  +          ++
     KHJ32136.1 205 G-----TSAYCRLIDYGRMRSIANKVDAYLVVDMAHISGLVAG----GVIPSPFEYAD-IVTTTTHKSLrGPRG---AMIFFRKgvrstdakTGKQ 287
                    3.....23344444455556669999**********8766652....45777777767.999999998744444...7777777888888896677 PP

                    HHHHHHHHHTS..........SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTEEEECCS..CSSEEEEEETHHCHHHHHHHHH CS
  Aminotran_1_2 242 qlrklsrpfls..........ssllqaavaaalsdallkqseleemrqrlqkrrkelrdeLaelglkvlasq..sgmflltdlsaetakelskkLl 325
                     l +l  p+++           +++  a+a al+ a     e+ + +++++k++k l +e+++ g k +a    s+m+ll + +++ + +  ++ l
     KHJ32136.1 288 ILYDLEGPINFsvfpghqggpHNHTITALAVALKQAAT--PEFRTYQEQIIKNAKALESEFKKMGYKLVADGtdSHMVLLDLRPQKLDGARVEAVL 381
                    77777777777777887666666677777777777664..4***********************76666543349***9977777788888888** PP

                    HTCTEEEEEGGGGTS.....TTEEEEECTTS- CS
  Aminotran_1_2 326 eevgvyvtpgtsftv.....pgrlRitvAglt 352
                    e+v++++ ++ +++      p  +Ri  +++t
     KHJ32136.1 382 EQVNIACNKNAIPGDksaltPCGIRIGTPAMT 413
                    *************9888887767888888877 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   6.7e-06      0.04      19     241 ..      78     354 ..      69     393 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 6.7e-06
                      HCS----CCCT--HHHHHHHHHHHHHTT-SEEE.E........ES-HHHHHHHHHHHH--TTEEEEEETT......-HHHHSSTTHHHHCC--E CS
  Beta_elim_lyase  19 aaamlGdesYgedktvnrLedavaelfgkeaal.f........vpqGtaAnsillkillqrgeevivtep......ahihfdetgaiaelagvk 97 
                      ++   G   Yg+++ + ++e  +++ + k+  l +          +G  An   +++++++++  +  +       +h++ + t+ i++++   
       KHJ32136.1  78 SEGYPGARYYGGNQHIDQIELMCQDRALKAFRLdPekwgvnvqSLSGSPANLQVYQAIMKPHDRLMGLDLphgghlSHGYQTQTKKISAISTY- 170
                      555566677888888888777777755555555335555555566899999999999998877665444468888899999999999998776. PP

                      EEEE-EBTT...TBE-HHHHHH.HS--S-TTS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEEETTHHHHHHHHTS-CHHHHT CS
  Beta_elim_lyase  98 lrdlknkea...Gkmdleklea.aikevgaheekiklisltvTnntagGqvvsleelrevaaiakkygiplhlDgARfanaakslgeivkemfs 187
                      + +l+ + +   G +d ++le+ a+    +     + ++++ T  +       l    +++ ia+k +  l++D A +    ++ g+i++  f+
       KHJ32136.1 171 FETLPYRVNletGIIDYDRLEEnALMY--R-----PKVLVAGTSAY-----CRLIDYGRMRSIANKVDAYLVVDMAHISG-LVAGGVIPS-PFE 250
                      666664444455999999999944444..2.....33666666665.....4555566677889999999******8865.679999986.69* PP

                      TSSEEEEESSSTT--SS-EEEEE-HH......................................................HHHHHHHHHHHHT- CS
  Beta_elim_lyase 188 yvDsvtmslkKdllanvGgvlafrddel..................................................edylaerveqrkylgg 231
                      y+D+vt    K l  + G++++fr+                                                       y ++ ++ +k+l +
       KHJ32136.1 251 YADIVTTTTHKSLRGPRGAMIFFRKGVRstdaktgkqilydlegpinfsvfpghqggphnhtitalavalkqaatpefRTYQEQIIKNAKALES 344
                      ************************9855888888888888888888888888888888888888888888888887776666666677777777 PP

                      --SSTHHHHH CS
  Beta_elim_lyase 232 glrqagvlaa 241
                      +++++g + +
       KHJ32136.1 345 EFKKMGYKLV 354
                      7777776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 3706.66
//
Query:       KHJ32137.1  [L=250]
Description: putative chaperone-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.2e-06   26.3  13.6      9e-06   25.8  13.6    1.2  1  MARVEL     Membrane-associating domain
  ------ inclusion threshold ------
       0.16   12.4   0.0        3.2    8.2   0.0    2.2  2  S-antigen  S-antigen protein
       0.54   10.5   4.3       0.16   12.2   0.7    1.8  2  DUF4293    Domain of unknown function (DUF4293)


Domain annotation for each model (and alignments):
>> MARVEL  Membrane-associating domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8  13.6   1.5e-09     9e-06       6     144 .]      15     136 ..      11     136 .. 0.75

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 1.5e-09
      MARVEL   6 lgilrilqlvfaiiilgliasliakldqllgspssalnfavfvavfsflyalfllvlylfknsaftsilwplidlivdalaallwlvafialaaglrdi 104
                 ++i+ + q vf  +i++l   + +k     ++ + +++f +++  +  l   ++l ++l +   + + + p+++  vd+l+a+lw+ +fi  a   ++ 
  KHJ32137.1  15 KTICHGTQAVFLFFIFILELIVFGK--ASSTDRRVSWQFGLVFLSIPAL---IFLTMTLRF-PRTKKLAQPYALATVDFLFAILWISGFISQASFNSSG 107
                 5677888977777777775544422..3466667777776655555444...333333332.377899******************************7 PP

      MARVEL 105 scafesnqysasltvrcgqaqaavafgflavllfaasavl 144
                 +c            ++cg ++a v +g+l+++++++++++
  KHJ32137.1 108 KC-----------LGACGISKAIVGLGVLTWFIWIVTTIF 136
                 77...........589*********************997 PP

>> S-antigen  S-antigen protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0   0.00054       3.2       9      39 ..      24      54 ..      20      59 .. 0.89
   2 ?    1.5   0.0     0.063   3.8e+02      32      47 ..     135     150 ..     132     157 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00054
   S-antigen  9 fylfflylyiyktygkvkntdqelsniygik 39
                 +lff+++     +gk   td+ +s  +g+ 
  KHJ32137.1 24 VFLFFIFILELIVFGKASSTDRRVSWQFGLV 54
                689999999999*************999875 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.063
   S-antigen  32 lsniygikyylrngll 47 
                 +  +yg+ y+ r+g+l
  KHJ32137.1 135 IFSLYGVMYWKREGYL 150
                 5679**********97 PP

>> DUF4293  Domain of unknown function (DUF4293)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.7   2.6e-05      0.16      70     139 ..       1      69 [.       1      73 [. 0.65
   2 ?   -1.0   0.2      0.32   1.9e+03      54      69 ..     126     138 ..      81     147 .. 0.53

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.6e-05
     DUF4293  70 iaIflyknRklQl..rlclinllllvllyvllallllvnkanaaaeslgesslkigli.lplialilnlLAir 139
                 +a+f + +  +Q   ++c+ +  ++++++++l l +++ ka+++   +   s+++gl+ l + ali++++ +r
  KHJ32137.1   1 MALFEFDHHNIQQykTICHGTQAVFLFFIFILEL-IVFGKASSTDRRV---SWQFGLVfLSIPALIFLTMTLR 69 
                 5789999999987114555555555555555555.5666665555555...8888865056789***999887 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.32
     DUF4293  54 vwvlvilllliailal 69 
                 +   +++ ++++i++l
  KHJ32137.1 126 T---WFIWIVTTIFSL 138
                 2...222233333444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       656  (0.0365888); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.20s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 2031.29
//
Query:       KHJ32138.1  [L=205]
Description: putative rab protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-43  148.6   0.0    1.3e-43  148.4   0.0    1.0  1  Ras          Ras family
    1.7e-26   92.8   0.0    2.7e-26   92.1   0.0    1.3  1  Roc          Ras of Complex, Roc, domain of DAPkinase
    9.6e-10   38.2   0.0    1.2e-09   37.9   0.0    1.2  1  Arf          ADP-ribosylation factor family
    5.3e-05   23.3   0.0    9.8e-05   22.4   0.0    1.5  1  MMR_HSR1     50S ribosome-binding GTPase
     0.0019   17.6   0.0     0.0032   16.9   0.0    1.4  1  SRPRB        Signal recognition particle receptor beta subuni
     0.0027   17.1   0.0     0.0031   16.9   0.0    1.3  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
  ------ inclusion threshold ------
      0.017   14.7   0.0      0.063   12.8   0.0    1.9  1  GTP_EFTU     Elongation factor Tu GTP binding domain
      0.021   15.2   0.0      0.035   14.5   0.0    1.6  1  AAA_16       AAA ATPase domain
      0.035   13.8   0.0      0.072   12.8   0.0    1.4  1  AAA_29       P-loop containing region of AAA domain
       0.05   13.8   0.0       0.14   12.3   0.0    1.6  1  AAA_33       AAA domain
      0.068   13.1   0.0       0.34   10.8   0.0    1.9  2  RsgA_GTPase  RsgA GTPase
       0.14   11.7   0.0       0.31   10.5   0.0    1.5  1  AAA_7        P-loop containing dynein motor region
       0.15   11.8   0.1       0.96    9.1   0.0    2.1  3  AAA_24       AAA domain
       0.17   12.4   0.1       0.41   11.2   0.1    1.5  1  ABC_tran     ABC transporter


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.4   0.0   1.1e-46   1.3e-43       1     160 [.      11     173 ..      11     175 .. 0.95

  Alignments for each domain:
  == domain 1  score: 148.4 bits;  conditional E-value: 1.1e-46
                 EEEEEESTTSSHHHHHHHHHHSSCSSS.CTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkee.yesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeik 98 
                 K++++G s+ GK++ll+r+ +d+F++e +++Tigvdf++k i+v+g+ ++l+++DTAGqe+f++l ++yyr+a++ill+ydi++resf  +++w++e++
  KHJ32138.1  11 KILMIGPSGAGKSALLIRYCDDQFDSEsSTATIGVDFKVK-ISVHGTAYRLNLLDTAGQERFRTLSNSYYRNAHAILLMYDISNRESFLALDRWFDEVE 108
                 89**********************8651678******986.89******************************************************** PP

                 HHSTTTSEEEEEEETTTGGG..G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras  99 rvaeenvpivLvGnKvDlee..kravsteegeelakelg.lkfletSAktnenveeafeellrei 160
                   a    + +LvG K+D ++   r vs ee+++ ak  g + ++e+S kt+env+ +f e+++++
  KHJ32138.1 109 ANAIPGAVTYLVGCKCDKASlgLRRVSSEEASAKAKIRGaVGWCEVSSKTRENVRRVFSEVVEAV 173
                 ***999***********999889*************99999********************9987 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.1   0.0   2.1e-29   2.7e-26       1     120 []      11     126 ..      11     126 .. 0.85

  Alignments for each domain:
  == domain 1  score: 92.1 bits;  conditional E-value: 2.1e-29
                 EEEEESSTTSSHHHHHHCHCT-CCC-E.EETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsek.ekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenl 95 
                 K++++G sg+GK+ ll r+++d+f+++ +++tigvdf+ k   +++g       + ++ln+ DtaGqerfr+l ++y+r+a++++l+yd   ++s+  l
  KHJ32138.1  11 KILMIGPSGAGKSALLIRYCDDQFDSEsSTATIGVDFKVKI--SVHG-------TAYRLNLLDTAGQERFRTLSNSYYRNAHAILLMYDisnRESFLAL 100
                 9***********************8552689******9874..3444.......4689*******************************7533345688 PP

                 HHHHHHHHHHCS.SS-EEEEEE-TTT CS
         Roc  96 keWlkelkkvag.kspvilvgnkiDl 120
                 ++W++e++++a   ++  lvg k+D+
  KHJ32138.1 101 DRWFDEVEANAIpGAVTYLVGCKCDK 126
                 ********9986156778******95 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.9   0.0     9e-13   1.2e-09      15     126 ..      10     125 ..       4     173 .. 0.75

  Alignments for each domain:
  == domain 1  score: 37.9 bits;  conditional E-value: 9e-13
                 EEEEEEESTTSSHHHHHHHHHHSSCEE..CSSSSSEEEE...EEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHC CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvt..tvPTigfnve...eleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkall 108
                 l+il++G  +aGK+ +l ++ ++++++   + Tig + +   +++   +++++ D  Gqe+ R l ++Y+++ +a++ + D ++re +    + ++++ 
  KHJ32138.1  10 LKILMIGPSGAGKSALLIRYCDDQFDSesSTATIGVDFKvkiSVHGTAYRLNLLDTAGQERFRTLSNSYYRNAHAILLMYDISNRESFLALDRWFDEV- 107
                 79*********************99873356667655443244566889***********************************99887777666664. PP

                 TSGCCTTSEEEEEEE-TT CS
         Arf 109 eeeelkevallvlaNKqD 126
                 e + +  ++  +++ K D
  KHJ32138.1 108 EANAIPGAVTYLVGCKCD 125
                 334444444444455555 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   7.6e-08   9.8e-05       2      87 ..      12      94 ..      11     120 .. 0.68

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 7.6e-08
                EEEEESTTSSHHHHHHHHHTSTEEE.SSSTTSSSSEEEEE.EEETT..EEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT.T CS
    MMR_HSR1  2 vaivGrpNvGKStLinaltgekaiv.sdkpgtTrdinegr.vklkg..keielvDtpGliegaseekglgkaflaleeadlillvvdas.e 87
                ++ +G + +GKS L+ + ++++    s+++    d + +  v+  g   +++l+Dt+G  e   + + l++++ +  +a++ill+ d+s +
  KHJ32138.1 12 ILMIGPSGAGKSALLIRYCDDQFDSeSSTATIGVDFKVKIsVH--GtaYRLNLLDTAG-QE---RFRTLSNSYYR--NAHAILLMYDISnR 94
                889*****************85533144444444443332033..32489********.54...44489999996..78999999999842 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   2.5e-06    0.0032       5      85 ..      11      91 ..       8     133 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 2.5e-06
                EEEEE-STTSSHHHHHHHHHHS..S---B---SS-EEETTG....GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEET CS
       SRPRB  5 avllvGlsdsGKTslftrLttd..svkktvtSqessaalkv.ksekgskltliDfPGheklrqklleklkaksslkglvfvvDS 85
                ++l++G+s +GK +l+ r   d    +++ + +   +  k+       +l+l+D  G+e++r+ l+++  + +++++++ + D 
  KHJ32138.1 11 KILMIGPSGAGKSALLIRYCDDqfDSESSTATIGVDFKVKIsVHGTAYRLNLLDTAGQERFRT-LSNS--YYRNAHAILLMYDI 91
                699******************9542334444455666666612335567899*********97.7777..77888888888875 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   2.4e-06    0.0031       1      91 [.      11      96 ..      11     182 .. 0.71

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 2.4e-06
   Gtr1_RagA  1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksevrflg.nltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesrel 91
                k+L++G+sg+GK+++     d     +  + ++ +d +  ++ ++g    lnl+D  Gqe+f +      +++ +rn  +++ + D+++re 
  KHJ32138.1 11 KILMIGPSGAGKSALLIRYCDDQFDSESSTATIGVDFKV-KISVHGtAYRLNLLDTAGQERFRTL-----SNSYYRNAHAILLMYDISNRES 96
                89************9776666665555554444444443.3444440569**********99766.....4778888899999999885543 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   4.9e-05     0.063      60     188 ..      50     169 ..       8     182 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.9e-05
                 EEEEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB.STHHHHHHHHHHHHTTTE...EEEEEESCGSTHHHHHHHHHHHHHHHHHHH CS
    GTP_EFTU  60 aisleketkkylinliDtPGHvdFskevirglrvlDgavlvvdaveG.vepqteevlrlalkegvp...iivfiNKmDrlkaelkeiveevkqklsrke 154
                  is++  ++ y++nl+Dt G + F       +r ++  +l+ d+++        + +  + ++ +p   + ++  K+D++   l+++ +e  +      
  KHJ32138.1  50 KISVH--GTAYRLNLLDTAGQERFRTLSNSYYRNAHAILLMYDISNReSFLALDRWFDEVEANAIPgavTYLVGCKCDKASLGLRRVSSEEASAK---- 142
                 34555..99*****************99999**********998754255566677777777777775444455688888888877777666333.... PP

                 HHHHHHHHTTTTTEEEEEEBTTTTBTHHHHHHHH CS
    GTP_EFTU 155 eklekygekgekevpvvfgSalkgegvktlleal 188
                      ++ +g   v  + +S+++ e+v+ +++ +
  KHJ32138.1 143 -----AKIRG--AVGWCEVSSKTRENVRRVFSEV 169
                 .....22233..2455666666666665555554 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   2.7e-05     0.035      26     103 ..      11     109 ..       1     181 [. 0.58

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.7e-05
      AAA_16  26 lvllsGesGvGKsslv.rellralekd........ggiflrgkcdqlesaipysa.laqalareellrqllde.................aesaeleaw 97 
                  +l +G+sG GKs+l+ r + +++  +        +   ++ k      +++y   l++++ + e +r l +                  ++  +l++w
  KHJ32138.1  11 KILMIGPSGAGKSALLiRYCDDQFDSEsstatigvD---FKVKIS--VHGTAYRLnLLDTAGQ-ERFRTLSNSyyrnahaillmydisnrESFLALDRW 103
                 57899***********88888888777555444331...222222..2244443335555533.55554444434433333333333333666666666 PP

      AAA_16  98 reklee 103
                  ++ e+
  KHJ32138.1 104 FDEVEA 109
                 665544 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   5.6e-05     0.072      25      39 ..      12      26 ..       4      27 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 5.6e-05
      AAA_29 25 tlltGpsGsGKSTll 39
                +l++GpsG+GKS+ll
  KHJ32138.1 12 ILMIGPSGAGKSALL 26
                799**********97 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00011      0.14       2      21 ..      12      31 ..      12      47 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00011
      AAA_33  2 vllvGlpGsGKstlaerllk 21
                +l++G++G+GKs l+ r++ 
  KHJ32138.1 12 ILMIGPSGAGKSALLIRYCD 31
                79************999885 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00026      0.34     103     121 ..      13      31 ..       8      67 .. 0.80
   2 ?    0.1   0.0      0.52   6.7e+02       5      93 ..      71     165 ..      67     194 .. 0.56

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00026
                  EEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase 103 vlvGqSGvGKStLinallp 121
                  +++G+SG+GKS+L+ +   
   KHJ32138.1  13 LMIGPSGAGKSALLIRYCD 31 
                  689**********976655 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.52
                  S-EETTTTEES--EEEEEEESTTTT--HHHHHHHHHHHHHTT-E...EEEEEE-GGG--HHH.....HHHHHHHHHHHTTSEEEE--TTTHTTHHHH CS
  RsgA_GTPase   5 knelvrpkvaNvdqllivvslkepelslnlldrfLvlaeekgie...pvivlnKiDlleeee.....eleelkeelealgyevllvsaktkegleel 93 
                    +l+++   N   +l++  ++ ++ s   ldr   ++e++ i+     +v  K+D ++        e  + k++++ + +  + vs+kt+e+++++
   KHJ32138.1  71 FRTLSNSYYRNAHAILLMYDIS-NRESFLALDRWFDEVEANAIPgavTYLVGCKCDKASLGLrrvssEEASAKAKIRGA-VGWCEVSSKTRENVRRV 165
                  5556666666666666666666.55566667777777777777411122333455554433333321112222222222.45556666666666555 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00024      0.31      35      72 ..      11      50 ..       8      62 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00024
       AAA_7 35 pvllvGptGtGKtviikd.llkkld.kekylsltinfsaq 72
                ++l++Gp+G GK++++ + + +++d ++++ ++ + f+ +
  KHJ32138.1 11 KILMIGPSGAGKSALLIRyCDDQFDsESSTATIGVDFKVK 50
                689***********99995556666233444455555555 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00075      0.96       3      22 ..      10      29 ..       9      73 .. 0.82
   2 ?   -2.6   0.0       2.9   3.7e+03     157     182 ..     109     134 ..      95     150 .. 0.69
   3 ?   -0.1   0.1      0.51   6.6e+02     151     180 ..     153     184 ..     132     192 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00075
      AAA_24  3 lkiliyGpsgiGKTtlakel 22
                lkil++Gpsg+GK+ l+ ++
  KHJ32138.1 10 LKILMIGPSGAGKSALLIRY 29
                69************998777 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.9
      AAA_24 157 anelkeevDlvlranlkredkvgerv 182
                 an++++ v++++ ++ ++++ + +rv
  KHJ32138.1 109 ANAIPGAVTYLVGCKCDKASLGLRRV 134
                 57777777777777777666444444 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.51
      AAA_24 151 klgkktanelkeevDlvlranlkred..kvge 180
                 ++++kt ++++  + +v++a ++ ++  kvg+
  KHJ32138.1 153 EVSSKTRENVRRVFSEVVEAVVRDKElmKVGR 184
                 46788888888888888888876555665555 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   0.00032      0.41      13      28 ..      11      26 ..       6      51 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00032
                EEEEEESTTSSHHHHH CS
                xxxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLl 28
                k+ ++G++GaGKS Ll
  KHJ32138.1 11 KILMIGPSGAGKSALL 26
                6789*********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       728  (0.0406046); expected 358.6 (0.02)
Passed bias filter:                      612  (0.0341346); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.39
# Mc/sec: 1589.65
//
Query:       KHJ32139.1  [L=460]
Description: putative trna a64-2 -o-ribosylphosphate transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   3.2e-103  344.9   0.0   5.8e-103  344.1   0.0    1.4  2  Rit1_C        Rit1 N-terminal domain
    9.8e-31  106.3   2.0      1e-30  106.3   0.6    1.8  2  Init_tRNA_PT  Rit1 DUSP-like domain


Domain annotation for each model (and alignments):
>> Rit1_C  Rit1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  344.1   0.0  6.4e-107  5.8e-103       1     271 [.      25     281 ..      25     282 .. 0.95
   2 ?   -3.9   0.0      0.79   7.1e+03     177     204 ..     360     389 ..     346     396 .. 0.43

  Alignments for each domain:
  == domain 1  score: 344.1 bits;  conditional E-value: 6.4e-107
      Rit1_C   1 lkrselsiknrLrSiaeDaeFveevaeaykklplvaNeRcGsWYvkpekkkasaYFkStdGHtgqwkfslrRlNlhllelieeekgiiivdsTrrGkrm 99 
                 l+rs+l+i+nrL Si++D++F e++ ++y  +pl+aNeRcGsWYv+p+ k asaYFkStdGHtg wkfs+rRlNlhlle+i +++g+iivdsTrrGk+m
  KHJ32139.1  25 LRRSNLTIRNRLVSIHHDSHFAEQIFAKY-GRPLIANERCGSWYVQPKIKVASAYFKSTDGHTGVWKFSVRRLNLHLLEIIGKNDGCIIVDSTRRGKSM 122
                 79***************************.8******************************************************************** PP

      Rit1_C 100 PDalskTiPiWcavlnralleeeeeseeeselklatppevvsesekaqiearidefveklkelkldleklkaklkkplrplwitpesslleeeeeekef 198
                 PDal kT+PiWcavlnr +++   e  +++  +l++pp++vs se +qi+++++ fv++l++l+++  +l++ l kplrplw+tp+s  ++e+ +  +f
  KHJ32139.1 123 PDALIKTVPIWCAVLNRYIFP---E--KSTWHSLHCPPQLVSPSEFDQINSLLPYFVTNLQSLNISPIQLRKYLYKPLRPLWVTPDSVFSDEKLNFPDF 216
                 ********************9...3..334445556*****************************9999****************************** PP

      Rit1_C 199 tpvilvtaSkreeelseakeklekeegfkYiqGaaDDeEnWaegLtpelfWknkeellsteeeeleelieelv 271
                 +pvi++t+S++   +   +  + +++g  YiqGa+DD+EnWa+gLtpelfW+++eell  ++++l+++ie+lv
  KHJ32139.1 217 HPVICCTVSRH---I---EGGELSASG--YIQGAGDDTENWAHGLTPELFWEKIEELLLISNSDLPDYIEKLV 281
                 **********2...2...234566778..*****************************************997 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 0.79
      Rit1_C 177 lrplwitp..esslleeeeeekeftpvilv 204
                 l   ++    +++  + +++e++f+ ++ +
  KHJ32139.1 360 LITNFVASkvKNKNIKLKNNENNFNIIVAC 389
                 333333331112222222223445555544 PP

>> Init_tRNA_PT  Rit1 DUSP-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.1     1e+04       7      33 ..     285     311 ..     280     322 .. 0.71
   2 !  106.3   0.6   1.1e-34     1e-30       3     110 .]     340     457 ..     338     457 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.1
  Init_tRNA_PT   7 lgsgKkgsknLrtalpkivdfvrkrls 33 
                    +s+K  +k++r + p+ + f+++ ++
    KHJ32139.1 285 KSSSKCIKKEMRCIRPTSCLFITSISE 311
                   556677788888888888888877655 PP

  == domain 2  score: 106.3 bits;  conditional E-value: 1.1e-34
  Init_tRNA_PT   3 lelklgsgKkgsknLrtalpkivdfvrkrlsedkk........kkilvacetGkdlsvgvaLailcklfdda....klseeqsesnitKdlirkrLq 87 
                   + +++g +K + +nLr+ lp i++fv++++++++          +i+vacetGk+ s+gvaL+ilc +fdd+    +   ++++++i+K++i++rL+
    KHJ32139.1 340 IMIGIGREKLAARNLRKTLPLITNFVASKVKNKNIklknnennFNIIVACETGKESSIGVALVILCLFFDDDanlmE--IHRDKRAINKSFIKSRLS 434
                   568999***********************98865588999999889***********************77756443..467889************ PP

  Init_tRNA_PT  88 wiieaspeanPsRatLksVnsfL 110
                   wi  + pe+nP RatL+sVn+fL
    KHJ32139.1 435 WISVSIPEVNPRRATLQSVNNFL 457
                   **********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (460 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 3466.14
//
Query:       KHJ32140.1  [L=144]
Description: hypothetical protein EV44_g4197 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 1138.27
//
Query:       KHJ32141.1  [L=499]
Description: putative f-box domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-08   32.1   0.0    1.7e-07   31.0   0.0    1.6  1  F-box-like  F-box-like
    3.8e-06   26.6   0.1    8.4e-06   25.5   0.1    1.6  1  F-box       F-box domain
  ------ inclusion threshold ------
      0.091   12.7   0.0       0.17   11.8   0.0    1.4  1  MRP         Mitochondrial RNA binding protein MRP
       0.12   12.4   0.0       0.32   11.1   0.0    1.7  1  DUF4520     Domain of unknown function (DUF4520)


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0   3.8e-11   1.7e-07       2      34 ..       8      40 ..       7      45 .. 0.92

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 3.8e-11
  F-box-like  2 srLPdEiLlqIFsyLppsdLlrlalVCrrWrrv 34
                  LP+E+ l+I + L ++dLlr++lVC++W++ 
  KHJ32141.1  8 KKLPNELFLEIAENLYFEDLLRARLVCKSWYQS 40
                57*****************************85 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.1   1.9e-09   8.4e-06       4      38 ..       8      42 ..       5      49 .. 0.91

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 1.9e-09
                HHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHT CS
       F-box  4 srLPsevlrhILerLplsdllalrrVSkgwrilid 38
                  LP+e+ ++I e+L + dll++r+V+k+w++  +
  KHJ32141.1  8 KKLPNELFLEIAENLYFEDLLRARLVCKSWYQSFC 42
                57*****************************9766 PP

>> MRP  Mitochondrial RNA binding protein MRP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.8e-05      0.17      47      82 ..     459     494 ..     427     498 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.8e-05
         MRP  47 srkdvssgallrvpvldeslireqtkvdhfwgLddd 82 
                  ++ +s  + +rv  +d+++++  +k +++w++dd 
  KHJ32141.1 459 CDDKLSVNSEIRVYGDDNFVVLKAHKMAKVWQFDDL 494
                 488999999*************************96 PP

>> DUF4520  Domain of unknown function (DUF4520)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   7.1e-05      0.32      20      59 ..     117     156 ..     113     162 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.1e-05
     DUF4520  20 ysdgrVhvvFeDrtvLnlvwdfssrvqktqreqkeedgvc 59 
                 ys+grV v+++Dr +L+  +++++++ +   +++++   c
  KHJ32141.1 117 YSEGRVAVCYRDRFILEDLYTRKQSIFEFPANTNQRVSSC 156
                 9****************99999998877777755555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3571.01
//
Query:       KHJ32142.1  [L=1507]
Description: putative calcium transmembrane m [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-79  267.3  26.4    1.5e-79  267.3  26.4    2.4  3  PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-t
    1.8e-18   66.0   0.5    6.3e-18   64.2   0.5    1.9  1  PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
    7.4e-14   51.6   0.1    1.6e-12   47.3   0.0    2.9  3  Cation_ATPase    Cation transport ATPase (P-type)
    4.5e-09   36.9   4.5      2e-05   25.0   0.5    3.1  2  Hydrolase        haloacid dehalogenase-like hydrolase
    7.4e-06   25.6   1.0    2.2e-05   24.1   0.0    2.3  2  E1-E2_ATPase     E1-E2 ATPase
    4.2e-05   22.5   1.1    8.7e-05   21.5   1.1    1.4  1  DUF740           Protein of unknown function (DUF740)
  ------ inclusion threshold ------
      0.013   15.3   1.4      0.059   13.1   0.7    2.4  2  Hydrolase_3      haloacid dehalogenase-like hydrolase
        1.5    9.0   4.3       0.37   10.9   0.1    2.2  2  Erf4             Golgin subfamily A member 7/ERF4 family


Domain annotation for each model (and alignments):
>> PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   1.4       4.2   9.3e+03     178     198 ..     145     156 ..     128     182 .. 0.50
   2 ?   -3.2   3.2       2.5   5.6e+03     176     226 ..     512     568 ..     471     594 .. 0.46
   3 !  267.3  26.4   6.7e-83   1.5e-79       1     248 [.    1098    1347 ..    1098    1348 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 4.2
  PhoLip_ATPase_C 178 liliililgsillyflfllly 198
                      + ++ ++++ i         +
       KHJ32142.1 145 IANVYFLFLII---------L 156
                      22222222211.........1 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.5
  PhoLip_ATPase_C 176 wtliliililgsillyflflllyssllps.........ssefygvleelfsspsfwlvll 226
                      w+   +i  ++ +ll++++ ++++ +++          ++  +g    l + ++fw+ ++
       KHJ32142.1 512 WN---VIYNFIILLLMCFVAAIIQGVTWAqgdnslnffEFGSIGGHPALDGFITFWAAVI 568
                      32...3333332222222223333333333443333333333333444444444554433 PP

  == domain 3  score: 267.3 bits;  conditional E-value: 6.7e-83
  PhoLip_ATPase_C    1 vraSDyaiaqFrfLkrLLlvhGrwsyrRisklilyffyKnvvftlvqfwfqfyngfsgqslyeswlltlynllftslpvivlgifdqdvsae 92  
                       v+++Dyai+qFrfL+rL+lvhGrwsyrR+ ++i  ffyKn+v+t++ fw+q+++ f  ++ly++++++l+nl fts+pvi++g++dqdvs++
       KHJ32142.1 1098 VMSADYAIGQFRFLQRLILVHGRWSYRRLGETIANFFYKNIVWTFTIFWYQIFCSFDMTYLYDYTYILLFNLAFTSVPVIFMGVLDQDVSDK 1189
                       79****************************************************************************************** PP

  PhoLip_ATPase_C   93 lllkyPelYklgqknklfnlktfllwileglyqsliifflsylvlddssfs...dgktndlqlfgtlvftalvlvvnlkvaletktwtlili 181 
                       ++ ++P+lY++g +++++++++f+l++l+glyqs+++ff++y++++ ++f    + +  d + fg+++  a+v+v+n++++l+t++w+++++
       KHJ32142.1 1190 VSISVPQLYRRGIERREWTQTKFWLYMLDGLYQSVVCFFIAYYLFYPANFVthnGLNVEDRERFGVYIGPAAVVVINTYILLNTYRWDWLMV 1281
                       ********************************************999988889888999********************************* PP

  PhoLip_ATPase_C  182 ililgsillyflflllyssllpsssefygvleelfsspsfwlvlllvvvvallpdllikvlkrtffp 248 
                        l+++s ll+++++ +ys++ + s  fy++++e+fs+psfw+v++l++++allp+++ik+ ++++fp
       KHJ32142.1 1282 TLVVVSSLLVWFWTGVYSAFRT-SGLFYKAAAEAFSQPSFWAVTILSIILALLPRFCIKAAQKIYFP 1347
                       *****9999999*****99766.799999************************************98 PP

>> PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.2   0.5   2.8e-21   6.3e-18      13      60 ..     117     164 ..     101     170 .. 0.89

  Alignments for each domain:
  == domain 1  score: 64.2 bits;  conditional E-value: 2.8e-21
  PhoLip_ATPase_N  13 kyasNkIsTsKYtlltFlpknLfeqFrrvaNlYFLviailqliPqisp 60 
                      ++++NkI+T+KYt l+F+pkn++ qF+++aN+YFL+++il ++  + +
       KHJ32142.1 117 QFKRNKIRTAKYTPLSFVPKNIWFQFHNIANVYFLFLIILAFFSIFGA 164
                      8*****************************************987665 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.3   0.0   7.2e-16   1.6e-12      20      87 ..     757     835 ..     724     837 .. 0.93
   2 ?   -2.0   0.0       1.8     4e+03      15      28 ..     936     949 ..     928     965 .. 0.85
   3 ?   -0.3   0.0      0.52   1.2e+03       9      31 ..     980    1002 ..     957    1023 .. 0.79

  Alignments for each domain:
  == domain 1  score: 47.3 bits;  conditional E-value: 7.2e-16
  Cation_ATPase  20 lGnktEsALlvlaekl............gldteelreetkkvqeipFnssrKrmsvvlklepekkvrlyvKGApeiilkr 87 
                      +++E+AL+  a+++             l+++ +++++k++++++Fns+rKrms +++  +++++++++KGA  +i++r
     KHJ32142.1 757 AQSPDEAALVATARDCgytvlgstpgniRLNVQGHERNFKILNILEFNSTRKRMSAIVRM-SNNQIVVFCKGADSVIYSR 835
                    6799*******************************************************9.6***************987 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.8
  Cation_ATPase  15 devkllGnktEsAL 28 
                    + + l+G+k E+A+
     KHJ32142.1 936 KLWVLTGDKVETAI 949
                    56889********8 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.52
  Cation_ATPase    9 sensekdevkllGnktEsALlvl 31  
                     + n+  ++++++G+ +E AL + 
     KHJ32142.1  980 ELNKHLATFNMTGSDSELALAKN 1002
                     5677788999**********875 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.5   8.9e-09     2e-05       2     156 ..     623     956 ..     622     986 .. 0.78
   2 !   10.9   0.3   0.00018       0.4     172     210 .]    1045    1084 ..    1018    1084 .. 0.85

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 8.9e-09
                 SEEEEESBTTTBCHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHH..........HHHHHHHHHETTTE....................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxx....................... RF
   Hydrolase   2 ktvvfDkdGTLttgepsvedvivsaalalaaaletgsehpigkalvaaakar..........sgaltgfatfigrg....................... 67 
                 + ++ Dk+GTLt+  ++ ++++                 p+g+a+++a  ++          +            g                       
  KHJ32142.1 623 EYIFSDKTGTLTQNVMEFKKATING-------------IPYGEAYTEAQAGMqkrqgidivkE------------Garareqiaqarikmlnnirklhd 696
                 67899**********9999999999.............7777777777777765553322221............111222333334444444433334 PP

                 .....HHHHTHHHHHHHH.......HCHHHHHHHHHHHHHHCHHHHHH................................................... CS
                 .....xxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxx................................................... RF
   Hydrolase  68 .....ayaigkpewltal.......dippdlgaaigsaqsqgrtvall................................................... 103
                                          d+  dl  + + +q+ + + ++l                                                   
  KHJ32142.1 697 nqflhD-----------DeltfiapDFIADLAGESTIEQQLANENFMLalalchtviseiipgdstriafkaqspdeaalvatardcgytvlgstpgni 784
                 323330...........13343333555555555555555555555556667777777777777777777777777777778***************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
   Hydrolase 104 ................................................................................................... 103
                                                                                                                    
  KHJ32142.1 785 rlnvqghernfkilnilefnstrkrmsaivrmsnnqivvfckgadsviysrlkpgeqvelrnttaehlemfareglrtlciaqkylsedeyrqwnrkye 883
                 *************************************************************************************************** PP

                 ......................TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTT CS
                 ......................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 104 ......................qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlG 156
                                       +  +l+  +i+d   + + + +++a L +agi++++ltgd  eta  +   ++
  KHJ32142.1 884 kaaaaiqdreekmefvadlierDLLLLGGTAIEDR--LQEAVPDTIAVLAEAGIKLWVLTGDKVETAINIGFSCN 956
                 ********************99999**********..777777***********************976655555 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00018
                  TTTSHHHHHHHHHHHT.STGGGEEEEESSHHHHHHHHHTT CS
                  xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  172 akpspegkvaaireLq.gkpeevamVGDgvnDaaalaaAg 210 
                    +sp +k a++   + g    ++ VGDg+nD+a++++A+
  KHJ32142.1 1045 CRVSPAQKAAVVSMVKqGLDVMTLSVGDGANDVAMIQEAD 1084
                  568999********96555556999*************98 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   9.7e-09   2.2e-05      21     144 ..     355     540 ..     353     587 .. 0.77
   2 ?   -2.8   1.1       1.7   3.9e+03     122     141 ..    1280    1299 ..    1251    1336 .. 0.54

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 9.7e-09
                   GG--TTSEEEEETT-B--SEEEEEEE-S.....EEE-TTTS---S-EE-................................................ CS
  E1-E2_ATPase  21 kelvpGDivllkagdrvpaDgrivegsa.....evdesaLTGEslpvek................................................ 64 
                   k++++GD v l ++d++paD+++++ s+      v++  L GE     +                                                
    KHJ32142.1 355 KNVKVGDFVRLYNNDQIPADIVVLSTSDsdgvcYVETKNLDGETNLKIRyalhsgrkikhardcekaefrieseppqanlyqysgaahwtqqstaad 451
                   79***********************555445559**********999999*********************************************** PP

                   ..........G-TTEE-TT-EEEE.-EEEEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHH.HHHHHHHHHHHHHHS-STTTSST CS
  E1-E2_ATPase  65 ..........ekgdmvfsGtvvvs.geakavVtatgedtelgkiarlveeakskktplqkkldklgkv.lvpvvlliallvflialllgksl 144
                             + ++m+  G++  + + + +vV+ tg dt++    ++  ++ sk++++ ++l+  + + ++++ l+++++++++ +++ ++ 
    KHJ32142.1 452 deliemseaiNINNMLLRGCNLRNtDWVLGVVVFTGFDTKIMM--NSGITP-SKRSRISRELNWNVIYnFIILLLMCFVAAIIQGVTWAQGD 540
                   *******9999**********99956788999******98743..333333.6788888888866666255555555555555555444443 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.7
                    HHHHHHHHHHHHHHS-STTT CS
  E1-E2_ATPase  122 lvpvvlliallvflialllg 141 
                    +v++v++ +llv++ + ++ 
    KHJ32142.1 1280 MVTLVVVSSLLVWFWTGVYS 1299
                    34444444444444444443 PP

>> DUF740  Protein of unknown function (DUF740)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   1.1   3.9e-08   8.7e-05     273     324 ..    1414    1466 ..    1390    1470 .. 0.82

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 3.9e-08
      DUF740  273 igrklrdtqseiadyafGRRsCDtdP.RFslDagRislDdprysfdePRAswD 324 
                  ++ +  + +s+++dy   R s D    R s+D +Ris+D pr sfd  RAs D
  KHJ32142.1 1414 VTTHNTRNGSDGTDYIHHRQSLDVYSsRLSMDRSRISIDRPRPSFDRMRASMD 1466
                  44444557899************8544************************99 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.94   2.1e+03      16      48 ..     919     951 ..     915     992 .. 0.78
   2 ?   13.1   0.7   2.6e-05     0.059     205     234 ..    1066    1097 ..    1048    1107 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.94
                  --HHHHHHHHHHHHTTSEEEEE-SS-HHHHHHH CS
  Hydrolase_3  16 isektkeaikklkekgikvviATGRslravlpv 48 
                  ++e   ++i+ l e+gik+ + TG ++++++++
   KHJ32142.1 919 LQEAVPDTIAVLAEAGIKLWVLTGDKVETAINI 951
                  566777888999999999999999888877776 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 2.6e-05
                   GEEEEESSGGGHHHHHHS..SEEEEETTS-HH CS
  Hydrolase_3  205 eviafGDgeNDieMLeaa..glgvAmgnasee 234 
                   +++++GDg ND++M++ a  g+g+A + +++ 
   KHJ32142.1 1066 MTLSVGDGANDVAMIQEAdvGVGIAGEEGRQA 1097
                   6899*************933444455555555 PP

>> Erf4  Golgin subfamily A member 7/ERF4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00016      0.37      24     103 ..     194     271 ..     112     285 .. 0.78
   2 ?   -4.2   0.8         8   1.8e+04      40      74 ..    1264    1298 ..    1261    1303 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00016
        Erf4  24 eLsgyiseeefeeiinkiNeilaeafspysvrnildnvlglltlylwslvlkthykkklkklekyieelNeelfkerglk 103
                  L+++++++  +++i+  N   +++ ++ ++r+i + +     l+lws++ k+ +k ++k++++ i++ N+  +++++++
  KHJ32142.1 194 VLDNKLNNSPVHRLIDWNN-VNVNEDDVSNWRKIKKATSH-TLLGLWSQFKKKSIKTRFKEIKQQINDDNRGSYESEECR 271
                 5777888888888887655.44556666688888766655.5589**************************999888874 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 8
        Erf4   40 kiNeilaeafspysvrnildnvlglltlylwslvl 74  
                   iN+++  +   +++  +   v++ l +++w+ v+
  KHJ32142.1 1264 VINTYILLNTYRWDWLMVTLVVVSSLLVWFWTGVY 1298
                  58888766666688888888888888888887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1046  (0.0583412); expected 358.6 (0.02)
Passed bias filter:                      596  (0.0332422); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.99u 0.28s 00:00:01.27 Elapsed: 00:00:00.45
# Mc/sec: 9999.92
//
Query:       KHJ32143.1  [L=314]
Description: putative gtp binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-17   63.6   0.0    2.5e-17   63.0   0.0    1.2  1  MMR_HSR1        50S ribosome-binding GTPase
    6.9e-07   29.0   0.0    1.5e-05   24.6   0.0    2.1  1  GTP_EFTU        Elongation factor Tu GTP binding domain
     0.0004   19.9   0.1    0.00058   19.4   0.1    1.3  1  SRPRB           Signal recognition particle receptor beta sub
    0.00045   20.2   0.0       0.01   15.8   0.0    2.2  2  RsgA_GTPase     RsgA GTPase
      0.001   19.2   0.1      0.024   14.7   0.1    2.2  2  Dynamin_N       Dynamin family
     0.0029   17.3   0.4      0.022   14.5   0.1    2.5  3  Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 famil
     0.0045   16.3   0.0     0.0068   15.7   0.0    1.3  1  Septin          Septin
  ------ inclusion threshold ------
      0.019   14.3   0.1      0.028   13.7   0.1    1.2  1  AIG1            AIG1 family
      0.046   13.3   0.0      0.085   12.4   0.0    1.6  1  FeoB_N          Ferrous iron transport protein B
      0.051   13.3   0.0        6.5    6.4   0.0    2.3  2  AAA_24          AAA domain
      0.063   13.5   0.0       0.12   12.5   0.0    1.5  1  Roc             Ras of Complex, Roc, domain of DAPkinase
      0.095   12.0   0.0       0.19   11.1   0.0    1.4  1  FtsK_SpoIIIE    FtsK/SpoIIIE family


Domain annotation for each model (and alignments):
>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.0   0.0   1.7e-20   2.5e-17       1     114 []      91     212 ..      91     212 .. 0.83

  Alignments for each domain:
  == domain 1  score: 63.0 bits;  conditional E-value: 1.7e-20
                 EEEEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEE......ETTEEEEEEECGGCSS...HHHHHHHHHHHHHHHHCTSEEEEEEETTTTC CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvk......lkgkeielvDtpGlie...gaseekglgkaflaleeadlillvvdaseek 89 
                 ev+++Gr+NvGKS+L+n+l+ +  a +s+kpg T+ +  + v+      +++++++++D+pG +    +a+ + ++ k + + ++ + ++l++d++ ++
  KHJ32143.1  91 EVCFLGRSNVGKSSLLNTLLCQrIAFTSSKPGRTKLMSAFAVDsekaidKNKNKLIFLDVPG-YGkggRADIGYEVIKYLNSRRQLKRVFLLIDVE-HG 187
                 699****************776489****************9987776555699********.85443455555555555555669********77.78 PP

                 SHHHHHHHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  90 lkpldeeleelleeakkplilvlnk 114
                 +k+ d+++ +l ++ + p+ ++l+k
  KHJ32143.1 188 MKKSDKHMLDLCKQINVPFQVLLSK 212
                 ***********99999999888876 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0     1e-08   1.5e-05       6     160 ..      92     241 ..      88     290 .. 0.70

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 1e-08
                 EEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSS.....GGGHHHHHHH...HHT-SE CS
    GTP_EFTU   6 igiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisleketkkylinliDtPGH.....vdFskevirg...lrvlDg 96 
                 ++++g  + GK++L+ +Ll++  a ++  +k + ++ +   + + e+ i           +++k ++ ++D PG      +d   evi+     r+l  
  KHJ32143.1  92 VCFLGRSNVGKSSLLNTLLCQRIAFTS--SKPGRTKLMSAFAVDSEKAI-----------DKNKNKLIFLDVPGYgkggrADIGYEVIKYlnsRRQLKR 177
                 778888888888888888866655555..44454555666555555544...........36777888888886433333889999986533389**** PP

                 EEEEEETTTBSTHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHHHHHHHHHHH CS
    GTP_EFTU  97 avlvvdaveGvepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqklsrkeekleky 160
                 + l++d+++G++   + +l l+++ +vp+ v++ K+D++++++  + +  + +l ++ ++l+++
  KHJ32143.1 178 VFLLIDVEHGMKKSDKHMLDLCKQINVPFQVLLSKVDKVISSVITQETSKSGRLGEVIDQLKEA 241
                 ***************************************6666555555555554443333333 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.1   3.9e-07   0.00058       3      85 ..      89     184 ..      87     223 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 3.9e-07
                 --EEEEE-STTSSHHHHHHHHHHS.....S---B---SS-EEETTG......GGTT-SEEEETT-GC.....CSHHHHHHHHHHGGEEEEEEEEET CS
       SRPRB   3 kpavllvGlsdsGKTslftrLttd.....svkktvtSqessaalkv...ksekgskltliDfPGhek.....lrqklleklkaksslkglvfvvDS 85 
                 +p v ++G s+ GK sl++ L+ +     s k+  t + s +a +     +++++kl ++D+PG  k     + ++++++l  +++lk++  ++D 
  KHJ32143.1  89 RPEVCFLGRSNVGKSSLLNTLLCQriaftSSKPGRTKLMSAFAVDSekaIDKNKNKLIFLDVPGYGKggradIGYEVIKYLNSRRQLKRVFLLIDV 184
                 7899****************9999788875555566665666555542245556666777***9765444448999****999******9999996 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   6.7e-06      0.01     102     122 ..      92     112 ..      84     135 .. 0.84
   2 ?    2.1   0.0      0.11   1.6e+02      37      70 ..     194     226 ..     177     258 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 6.7e-06
                  EEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpe 122
                  ++++G S vGKS+L+n+ll +
   KHJ32143.1  92 VCFLGRSNVGKSSLLNTLLCQ 112
                  689***************976 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.11
                  HHHHHHHHTT-EEEEEEE-GGG--HHHHHHHHHH CS
  RsgA_GTPase  37 rfLvlaeekgiepvivlnKiDlleeeeeleelke 70 
                   +L l+++ +++  ++l+K+D + ++  +++  +
   KHJ32143.1 194 HMLDLCKQINVPFQVLLSKVDKVISSV-ITQETS 226
                  5778899999***********988777.444444 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.1   1.6e-05     0.024       1      30 [.      92     121 ..      92     144 .. 0.86
   2 ?    2.5   0.0     0.088   1.3e+02      96     148 ..     138     194 ..     124     204 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.6e-05
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnp 30 
                 ++++G  + GKSS+ln Ll ++i  +++ p
  KHJ32143.1  92 VCFLGRSNVGKSSLLNTLLCQRIAFTSSKP 121
                 57899******************9999987 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.088
                 EETTS-SEEEEE---B-SSSGTTS.HHHHHHH.STT..EEEEEEEETTS-CCC-CHH CS
   Dynamin_N  96 lsllvkgltlvDlPGldsvnkrdq.elvkeyi.kka..diilavtsanhdlsnseal 148
                  + ++++l ++D+PG+ +    d    v +y+  ++  + ++++ + +h +++s++ 
  KHJ32143.1 138 IDKNKNKLIFLDVPGYGKGGRADIgYEVIKYLnSRRqlKRVFLLIDVEHGMKKSDKH 194
                 577899999*******99888887744555653333114577777888888877765 PP

>> Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.1   1.7e+03      25      37 ..     136     148 ..     133     148 .. 0.88
   2 !   14.5   0.1   1.4e-05     0.022      21      67 ..     163     212 ..     161     237 .. 0.91
   3 ?   -2.0   0.0         2     3e+03      66      80 ..     227     241 ..     217     250 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.1
                     HHHHTTTESEEEE CS
  Ribosomal_L7Ae  25 kalergeaklvil 37 
                     ka+++++ kl++l
      KHJ32143.1 136 KAIDKNKNKLIFL 148
                     99********997 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 1.4e-05
                     HHHHHHHHTT.TESEEEEETTSSSGGHHH..HHHHHHHHTTEEEEEESCH CS
  Ribosomal_L7Ae  21 kevtkalerg.eaklvilAedvepeekkk..llealckekevpyvkvksk 67 
                     +ev+k l+++ + k v+l  dve  +kk+  ++  lck+++vp+    sk
      KHJ32143.1 163 YEVIKYLNSRrQLKRVFLLIDVEHGMKKSdkHMLDLCKQINVPFQVLLSK 212
                     69******998****************9999************9766665 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 2
                     CHHHHHHHTTSSSEC CS
  Ribosomal_L7Ae  66 skkeLGelvgkkrpv 80 
                        +LGe++++ + +
      KHJ32143.1 227 KSGRLGEVIDQLKEA 241
                     448999999987654 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   4.5e-06    0.0068       8      90 ..      93     170 ..      87     198 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 4.5e-06
                 EEEEBTTSSCCCCCCTTSSSS------------------S-EEEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHH CS
      Septin   8 mvvGesglGkttlintlfetdlieeekleeasekkkktveikkkkvvieedgvklnltviDtpgfGdavdnskswepiveyid 90 
                    G+s +Gk++l+ntl+ +++  +++ + +  k ++   ++++k+ i+++  k +l  +D pg+G     +  +e+ ++y++
  KHJ32143.1  93 CFLGRSNVGKSSLLNTLLCQRIAFTSSKPGR-TKLMSAFAVDSEKA-IDKN--KNKLIFLDVPGYGKGGRADIGYEV-IKYLN 170
                 568****************999988766655.56667777776665.5555..4567889******87766666653.45555 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   1.9e-05     0.028       4     106 ..      93     198 ..      91     229 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.9e-05
                 EEESSTTSSHHHHHHHHHTS--.SS--TT.TS---SS-..EEEEE.EETTEEEEEEE--SCCCTTCCHHCHHHHHHHHHHHCTT-ESEEEEEEETT.B- CS
        AIG1   4 vlvGktgnGkSaTgNsilgkka.Feskls.aqsvtkkc..qkksr.twdgkkinViDTPglfdlsvsadkiskeivrclllseegihalllvlslg.rf 96 
                   +G++ +GkS+  N++l +++ F+s+    +++++++   ++++  ++++k+   D Pg         +i  e+++ l+ s+  +  + l ++++  +
  KHJ32143.1  93 CFLGRSNVGKSSLLNTLLCQRIaFTSSKPgRTKLMSAFavDSEKAiDKNKNKLIFLDVPGYGKG--GRADIGYEVIKYLN-SRRQLKRVFLLIDVEhGM 188
                 679**************98875598875414444444411344445667788889999997544..44567888888444.444466666666776677 PP

                 SHHHHHHHHH CS
        AIG1  97 teedekalkt 106
                 ++ d+++l  
  KHJ32143.1 189 KKSDKHMLDL 198
                 7777777655 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   5.7e-05     0.085       3      56 ..      92     152 ..      90     227 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.7e-05
                 EEEEESTTSSHHHHHHHHHTTS.EEEEESTTSS.......SEEEEEEEEETTEEEEEEE--- CS
      FeoB_N   3 valvGnpnvGkttlfnaltgak.qkvgNwpGvt.......vekkegklklkgkeveivDlPG 56 
                 v+++G  nvGk++l+n+l  ++    +  pG t       v+ ++ +++ +++++ ++D+PG
  KHJ32143.1  92 VCFLGRSNVGKSSLLNTLLCQRiAFTSSKPGRTklmsafaVDSEK-AIDKNKNKLIFLDVPG 152
                 7899************98666514455667766332222233333.3333667777777777 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.014        21       4      27 ..      91     115 ..      88     154 .. 0.79
   2 ?    6.4   0.0    0.0044       6.5      24      72 ..     177     236 ..     167     252 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.014
      AAA_24   4 kiliyGpsgiGKTtlakel.gpkpl 27 
                  ++  G s +GK++l+++l  ++++
  KHJ32143.1  91 EVCFLGRSNVGKSSLLNTLlCQRIA 115
                 68999************99744444 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0044
      AAA_24  24 pkplfidtekGlksldadkfpdie....swedfldevvel.......aaeladyktlviD 72 
                   +l+id+e+G+k+ d + ++ ++     ++ +l++v+++       ++ +++    viD
  KHJ32143.1 177 RVFLLIDVEHGMKKSDKHMLDLCKqinvPFQVLLSKVDKVissvitqETSKSGRLGEVID 236
                 55899****************999999977777777777655555545555555444555 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   8.3e-05      0.12       2      29 ..      92     119 ..      91     154 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 8.3e-05
                 EEEESSTTSSHHHHHHCHCT-CCC-EEE CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfsekek 29 
                 v+++G s+vGK+sll+ ++ +++  +++
  KHJ32143.1  92 VCFLGRSNVGKSSLLNTLLCQRIAFTSS 119
                 799*************999877654443 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00012      0.19      26      71 ..      77     123 ..      59     128 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00012
                   TTS-EEEEEGGGS-.SEEEE--TTSSHHHHHHHHHHH..HHTT--TTT CS
  FtsK_SpoIIIE  26 isgnplvldlkkmashllvaGatgsGKStalntLilS..latthtPee 71 
                   + + p+ +d  + +  +  +G++  GKS  lntL++   + t ++P +
    KHJ32143.1  77 FKDMPFGHDFGERP-EVCFLGRSNVGKSSLLNTLLCQriAFTSSKPGR 123
                   47788888999999.9999****************9732333445655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2198.84
//
Query:       KHJ32144.1  [L=585]
Description: hypothetical protein EV44_g5934 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
       0.11   12.3   0.0        0.2   11.4   0.0    1.3  1  Bac_DnaA      Bacterial dnaA  protein
        1.8    8.6   5.6        7.1    6.7   0.1    3.0  2  Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C


Domain annotation for each model (and alignments):
>> Bac_DnaA  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.3e-05       0.2      31      85 ..     257     311 ..     243     341 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.3e-05
                 TT.S--EEEE-SSSSSHHHHHHHHHHHHHHHSSSS-EEEEEHHHHHHHHHHHHHT CS
    Bac_DnaA  31 gkkynPlfiygevGlGktHLlkaignevlenapelrvvYltaeeFlnelvkalrd 85 
                 ++++ Pl++y+e G+ +   l+a g +v +  ++ rv+ +t+ e + + ++ l +
  KHJ32144.1 257 ARAFEPLIFYSENGIRQIGDLQATGIAVWDLGESVRVTNMTSAEMIVTQLDDLSE 311
                 357**************************************99988777766655 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.1   0.00079       7.1      30      89 ..     296     347 ..     273     369 .. 0.56
   2 ?    1.5   2.4     0.032   2.9e+02      41      88 ..     416     462 ..     394     523 .. 0.62

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.00079
  Baculo_PEP_C  30 vqilaqlatlldaietqLnalsedlksllaeldtrldtlltnLtdalnalqdtlrneLtn 89 
                   ++ +  + t+ld++ ++L++l+ +l++  a++d ++d  l  ++          r eL  
    KHJ32144.1 296 MTSAEMIVTQLDDLSESLKNLAIELSRFFANVDGDVDGILIVMD--------WARRELSQ 347
                   44444445555555555555555555555555554444443333........33333333 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.032
  Baculo_PEP_C  41 daietqLnalsedlksllaeldtrldtlltnLtdalnalqdtlrneLt 88 
                   +ai+t+L++ s +l sl +++d+r+++l+ ++ + ln  +d+ + eL 
    KHJ32144.1 416 EAINTELTH-SLALFSLFSAIDHRFHNLARTVARELNDQEDASELELS 462
                   344444444.22344444445555555555555555554444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4009.31
//
Query:       KHJ32145.1  [L=1880]
Description: putative nucleoporin sonb protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.4e-90  302.6   0.1    3.8e-90  302.0   0.1    1.3  1  Nup96           Nuclear protein 96
    2.4e-55  186.8   0.0    5.1e-55  185.7   0.0    1.6  1  Nucleoporin2    Nucleoporin autopeptidase
    2.6e-14   53.8  72.3    7.7e-12   45.9  29.5   11.4  9  Nucleoporin_FG  Nucleoporin FG repeat region
  ------ inclusion threshold ------
      0.058   14.0   0.1       0.57   10.8   0.0    2.5  2  RPA43_OB        RPA43 OB domain in RNA Pol I


Domain annotation for each model (and alignments):
>> Nup96  Nuclear protein 96
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  302.0   0.1   8.4e-94   3.8e-90       1     292 []    1411    1708 ..    1411    1708 .. 0.97

  Alignments for each domain:
  == domain 1  score: 302.0 bits;  conditional E-value: 8.4e-94
       Nup96    1 ekifalLsghqveeAcelAldagdlrLAtllsqaggddevrkdlqeQleeWreekvdseieeellkiyelLaGnvlvsegkk.kke...stinvle. 92  
                  ek++a+Lsgh++++Ac+ +++ag++rL+tl++++g++d++++d+q+Q+++W++++++se++++++++yelLaGnv+v+++ k   e   +++++++ 
  KHJ32145.1 1411 EKAIACLSGHKIDDACSNLVAAGNMRLSTLIALIGSKDSIKSDMQAQIDAWQKSQILSEMTQPVRALYELLAGNVCVCDEVKgPPEdrvESFSISKr 1507
                  689****************************************************************************999666699********* PP

       Nup96   93 .gldWkralglhlwYgisadasieeaveaYeealesgeetakPlpwyleetskesskdakeekrerDllyhLLklyakktaslesvlePesvspspl 188 
                   gl+W++a+gl+lwY+is d++ie+ave ++++l++g+e++ P+pwy e++  e ++d+ +++re Dl++++Lkl + ++a+le+vl+Pe+++ sp+
  KHJ32145.1 1508 fGLNWRQAFGLRLWYAISVDDPIEAAVECFANDLSTGKEESWPSPWYVEQKVPELWQDPCVNERE-DLFWGILKLNTFENADLEDVLRPENSQLSPM 1603
                  *****************************************************************.******************************* PP

       Nup96  189 dyrlsWhLyqvLs.aasaeaeklssakadaltlsfasqLeaaglwewAvfVllhledparRekavkellarhasleeesddakeeflveklkiPeaW 284 
                  d+rlsW+L q++   +s +    +  k+d+ tlsfasqL ++g+w  A+fVllhl++p +R  a+k++l  +a + ++ d  +++ lv+++kiP+aW
  KHJ32145.1 1604 DMRLSWQLSQAILsLGSIKFVGDNDVKSDQTTLSFASQLINEGNWLDATFVLLHLSSPVARMMAIKDHLGCNAGHIGTVDCPNFKALVQSFKIPAAW 1700
                  ********99755255667777789999***********************************************99******************** PP

       Nup96  285 iheAkAly 292 
                  i+eAkAly
  KHJ32145.1 1701 IWEAKALY 1708
                  ******97 PP

>> Nucleoporin2  Nucleoporin autopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.7   0.0   1.1e-58   5.1e-55       2     149 .]     844     990 ..     843     990 .. 0.98

  Alignments for each domain:
  == domain 1  score: 185.7 bits;  conditional E-value: 1.1e-58
                   TTEEEES-HHHHHTS-HHHHTSBSS-EEEETTTEEEEESS-B--GGG-HHHHBTTTEEEETTEEEESSSCCC.---TTSTT-S-EEEEESS---B-T CS
  Nucleoporin2   2 gdYytePsleeLkkmseeelsavkdFtvgrkgvGsveFlepvdlssldldeiagkivklekkevtVYpdeekekppvGegLNkpaeitLenvwpkdk 98 
                   g+Y+++Ps +eL+km++ ++++v++++vgr gvGsv+F+ pvdl+s++ld+i+++ivk+e ++vtVYpd++k kpp+G+gLN+p++i Len+wp++k
    KHJ32145.1 844 GEYWMSPSKTELEKMNRVQRQRVSNLIVGRYGVGSVQFDVPVDLTSINLDDIMDGIVKIEVRQVTVYPDNHK-KPPMGKGLNVPSTIILENSWPRKK 939
                   79********************************************************************55.************************ PP

                   TT--B---TT-HHHHHHHHHHHH-SSSEEEEEETTTTEEEEEES--XXXXX CS
  Nucleoporin2  99 atkeeikdkskarvkkhieklkkvegteFvsydpetgtwtfkVeHFsrYgl 149
                   ++k++  dks+ r++khi+klkkve+teFv+yd  tgtwtf+V+HF++Yg+
    KHJ32145.1 940 DRKTPLIDKSGIRLQKHIDKLKKVEDTEFVDYDMLTGTWTFRVPHFTTYGF 990
                   *************************************************96 PP

>> Nucleoporin_FG  Nucleoporin FG repeat region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -25.3  75.0         4   1.8e+04       1      91 []      26     119 ..       2     193 .. 0.81
   2 ?    1.4  34.5      0.13   5.8e+02       3      77 ..     208     279 ..     198     282 .. 0.60
   3 ?  -21.0  74.0         4   1.8e+04      43      75 ..     320     356 ..     252     413 .. 0.42
   4 !   23.9  34.8   1.3e-08   5.7e-05       1      91 []     359     438 ..     353     438 .. 0.82
   5 !   45.9  29.5   1.7e-15   7.7e-12       1      91 []     398     479 ..     398     479 .. 0.89
   6 !   12.0  36.1   6.5e-05      0.29       1      83 [.     479     560 ..     479     598 .. 0.80
   7 ?   -0.8   3.8      0.65   2.9e+03      56      77 ..     643     664 ..     621     718 .. 0.60
   8 ?   -3.0   2.9       3.1   1.4e+04      45      82 ..     766     809 ..     719     818 .. 0.54
   9 ?    0.1   0.2      0.33   1.5e+03      55      67 ..    1207    1219 ..    1174    1239 .. 0.58

  Alignments for each domain:
  == domain 1  score: -25.3 bits;  conditional E-value: 4
  Nucleoporin_FG   1 glFGaaatstsgglFGststtatstgglFGasstatatasggglfgat.....sqtaasgglFGstnattqttatgglFGstaataqq....tts 86 
                     g+FG  + ++++  FG+++t    +++ FG +++a  +a+++++fg++      ++a sgglFG++n+t +t  ++g FGs+a+ a +    t++
      KHJ32145.1  26 GAFG--SGTSTNTGFGTPNTG--FGSTGFG-NTNAFGSAATTNAFGTAkpsafGTPAVSGGLFGNNNTTGSTF-GSGAFGSSATPAPTfgsnTNG 114
                     2344..344444455555555..5555788.5556666666668888888888889999********999987.9*****999999889998888 PP

  Nucleoporin_FG  87 gglFG 91 
                      g+FG
      KHJ32145.1 115 AGIFG 119
                     88998 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.13
  Nucleoporin_FG   3 FGaaatstsgglFGststt.atstgglFGasstatatasggglfgat......sqtaasgglFGstnattqttatgglFGst 77 
                     FG  ++s++ g+FG+t+     ++++ FG    +t++++gg++fg+        +++++++ FG++++++    ++glFG++
      KHJ32145.1 208 FG--NASNQPGAFGQTNFGgFGTNNTGFG----TTTNTTGGNMFGSVatsspfGTNTQANSGFGAATTNS----GTGLFGAK 279
                     66..5666677777777776555555677....5556666667777555555555555555555555443....55666655 PP

  == domain 3  score: -21.0 bits;  conditional E-value: 4
  Nucleoporin_FG  43 glfgatsqtaasgglFGstnattqtta.....tgglFG 75 
                     +lfg+ ++t+++   F s++++++t+a     t+glFG
      KHJ32145.1 320 SLFGQ-NATPKPAFSFASPTTNNSTNAfgtssTTGLFG 356
                     34443.22222222232222222222233333222222 PP

  == domain 4  score: 23.9 bits;  conditional E-value: 1.3e-08
  Nucleoporin_FG   1 glFG.aaatstsgglFGststtatstgglFGasstatatasggglfgatsqtaasgglFGstnattqttatgglFGstaataqqttsgglFG 91 
                     g+FG ++++++++  FGs+++t +++ g FG   t++ ++ +++lfg+ +q++++gglFG++++tt+   ++glFGs+++    +++++lFG
      KHJ32145.1 359 GGFGnSNQQQPASTGFGSQTAT-PNAFGGFG---TNNLQPGTSSLFGN-NQSKPTGGLFGAPSTTTN---STGLFGSAQT----APTTNLFG 438
                     45779899999999********.88889999...5555556667****.89************9987...68****6665....56899998 PP

  == domain 5  score: 45.9 bits;  conditional E-value: 1.7e-15
  Nucleoporin_FG   1 glFGaaatstsgglFGststtatstgglFGasstatatasggglfgatsqtaasgglFGstnattqttatgglFGstaataqqttsgglFG 91 
                     +lFG+++++++gglFG++stt t+++glFG   +a+++++++ lfga+++t++sgglFG+++a+t    t ++FG++++++ ++tsg++FG
      KHJ32145.1 398 SLFGNNQSKPTGGLFGAPSTT-TNSTGLFG---SAQTAPTTN-LFGASNTTQNSGGLFGNKPAATG---TDNIFGNSNNNQ-TNTSGNMFG 479
                     69*******************.9*******...455555555.*******************9886...68****888877.699999**9 PP

  == domain 6  score: 12.0 bits;  conditional E-value: 6.5e-05
  Nucleoporin_FG   1 glFGaaatstsgglFGststt.atstgglFGasstatatasggglfgatsqtaasgglFGstnattqtta...tgglFGstaataqq 83 
                     g FG++++++s++lFG+++++  +++ ++FG    ++++   ++ f + + t+++++lFG+ n++++++    ++++FGs+++  ++
      KHJ32145.1 479 GSFGNQNQQQSNSLFGGNNNNsFQQKPSIFG----TSQAGGVNSPFSN-TGTQQQNSLFGGFNNNQSQQLqqnNSSIFGSNNSPFSN 560
                     68**9**********999999899999****....2333333357877.677888999998777776655678999***99876544 PP

  == domain 7  score: -0.8 bits;  conditional E-value: 0.65
  Nucleoporin_FG  56 glFGstnattqttatgglFGst 77 
                     +++Gs+++tt+t++t g F +t
      KHJ32145.1 643 SAYGSPASTTSTSSTPGAFSNT 664
                     3344444444444433333332 PP

  == domain 8  score: -3.0 bits;  conditional E-value: 3.1
  Nucleoporin_FG  45 fgat......sqtaasgglFGstnattqttatgglFGstaataq 82 
                      g++      +++++s+   G     ++++++++ F s +++a+
      KHJ32145.1 766 NGTSsplkhaNSATPSSAELGYMRPHSSGNNSNSAFSSLNSEAE 809
                     22222233333444444444444444444445555554444443 PP

  == domain 9  score: 0.1 bits;  conditional E-value: 0.33
  Nucleoporin_FG   55 gglFGstnattqt 67  
                      ++lFG+tn + ++
      KHJ32145.1 1207 NSLFGQTNGSVKS 1219
                      4455555444333 PP

>> RPA43_OB  RPA43 OB domain in RNA Pol I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.59   2.6e+03      59     108 ..     820     871 ..     791     878 .. 0.69
   2 ?   10.8   0.0   0.00013      0.57      14      47 ..    1674    1709 ..    1671    1739 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.59
                 ----------------------EEEEEEE-T.TSSB--SE...EEEEEEEEE- CS
    RPA43_OB  59 eeeeeeeadaekeeeeelekaeeetGywvdsvsgekvegk...lkFrvvdvdv 108
                   +eee+ d+ ++++ el k+++   yw+   s++++e++    + rv ++ v
  KHJ32145.1 820 IVREEETHDPGEANALELMKDKNPGEYWMSP-SKTELEKMnrvQRQRVSNLIV 871
                 4456677777777777888888999999866.777665554446777777766 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00013
                  EESSEEEEEETTTEEEEEECTTS-TTSEEE.....C CS
    RPA43_OB   14 qseghiglvvlnlFnvsIerkrlpadWkwvpae..k 47  
                  +++ghig v    F++ +++ ++pa W w+++   k
  KHJ32145.1 1674 CNAGHIGTVDCPNFKALVQSFKIPAAWIWEAKAlyK 1709
                  689***************************655331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1880 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       571  (0.0318478); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.96u 0.30s 00:00:01.26 Elapsed: 00:00:00.49
# Mc/sec: 11633.48
//
Query:       KHJ32146.1  [L=563]
Description: putative enth domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-48  164.5   0.2    1.6e-48  163.8   0.2    1.3  1  ENTH      ENTH domain
    0.00042   20.0   6.0     0.0063   16.4   0.7    3.1  2  UIM       Ubiquitin interaction motif
     0.0015   17.6   0.0     0.0023   17.0   0.0    1.2  1  ANTH      ANTH domain
     0.0024   17.5   0.1     0.0049   16.5   0.1    1.5  1  DUF4264   Protein of unknown function (DUF4264)
     0.0057   17.0  35.0     0.0057   17.0  35.0    5.1  3  DUF1720   Domain of unknown function (DUF1720)
  ------ inclusion threshold ------
      0.042   13.7   0.0      0.077   12.8   0.0    1.4  1  VHS       VHS domain
       0.56    9.0   1.7        0.8    8.5   1.7    1.3  1  ALMT      Aluminium activated malate transporter


Domain annotation for each model (and alignments):
>> ENTH  ENTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.8   0.2   6.3e-52   1.6e-48       1     125 []      15     139 ..      15     139 .. 0.99

  Alignments for each domain:
  == domain 1  score: 163.8 bits;  conditional E-value: 6.3e-52
                 --HHHHHHHHHTSSSSSS--HHHHHHHHHHTTSH.HHHHHHHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHS-HHHHHHHHHTHHHHHGGGG---B- CS
        ENTH   1 yseteskvreatnndpwGpsnkllteiarltysk.kelseiisvitkrLqnnkgkewrsvlKaLtlieYLlknGseqvidwlkenisiiktlsefkyid 98 
                 ys++++kvr+at+ndpwGp+++++++ia++t+++ ++++ei+++++krL n+kgk+wr+vlKaL++++Y+l++Gse v++w+ +ni+iiktl+ef+yid
  KHJ32146.1  15 YSNVQVKVRNATSNDPWGPTGQEMSQIAQMTFNNiNDFYEIMDMLDKRL-NDKGKNWRHVLKALKVLDYCLHEGSEVVVTWAHKNIYIIKTLREFQYID 112
                 799*******************************9**************.************************************************* PP

                 TTS-B-HHHHHHHHHHHHHHHT-HHHH CS
        ENTH  99 eegkdeglniRkkakkiislledeerl 125
                 e+g+d g+n+R  ak+++sl+ deerl
  KHJ32146.1 113 EDGRDVGQNVRVSAKELTSLILDEERL 139
                 ************************997 PP

>> UIM  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.5    0.0098        25       1      13 [.     180     192 ..     180     193 .. 0.94
   2 !   16.4   0.7   2.5e-06    0.0063       2      16 ..     211     225 ..     211     225 .. 0.98

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0098
         UIM   1 dEdedLqrAlalS 13 
                 +Ed++ ++A++ S
  KHJ32146.1 180 EEDAEYRLAIEAS 192
                 7**********99 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 2.5e-06
         UIM   2 EdedLqrAlalSlqE 16 
                 EdedL++A+ lS +E
  KHJ32146.1 211 EDEDLAKAIKLSKEE 225
                 9*************9 PP

>> ANTH  ANTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0     9e-07    0.0023       2     108 ..      18     123 ..      17     131 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 9e-07
                 HHHHHHHHT-SSS---HHHHHHHHHHHCST.TS-HHHHHHHHHHHCTSS..SHHHHHHHHHHHHHHHHHS-CHHHHHHHHTT-----TT---TSHHHST CS
        ANTH   2 levavvKAtshdevPpkekhvreilvltss.rekvaalvwalsrrlklt.rnwvvalKaLilvHklLreGhpsveqellsarrrisellnlssfddsss 98 
                 ++v v+ Ats d   p  + + +i  +t +  +++ +++++l +rl+++ +nw  +lKaL ++   L eG++ v   ++ +   i+ l +++      +
  KHJ32146.1  18 VQVKVRNATSNDPWGPTGQEMSQIAQMTFNnINDFYEIMDMLDKRLNDKgKNWRHVLKALKVLDYCLHEGSEVVVTWAHKNIYIIKTLREFQY---IDE 113
                 5788999****998888888888988888889**************98659**********************99666666555555555554...345 PP

                 HHHHHHHHHH CS
        ANTH  99 kswdysafir 108
                 +++d+++++r
  KHJ32146.1 114 DGRDVGQNVR 123
                 6777777777 PP

>> DUF4264  Protein of unknown function (DUF4264)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   1.9e-06    0.0049       2      31 ..      38      67 ..      37      67 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.9e-06
     DUF4264  2 leliatkefeknddlYkvVDfLNktLKdkd 31
                ++ ia+++f++ +d+Y + D+L k L+dk+
  KHJ32146.1 38 MSQIAQMTFNNINDFYEIMDMLDKRLNDKG 67
                6789***********************985 PP

>> DUF1720  Domain of unknown function (DUF1720)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0  35.0   2.2e-06    0.0057       4      73 ..     251     351 ..     248     353 .. 0.95
   2 ?    0.7  23.9      0.28   7.3e+02      15      74 ..     320     380 ..     304     415 .. 0.70
   3 ?   -2.6  14.6       3.1   7.9e+03      37      66 ..     479     509 ..     454     557 .. 0.68

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 2.2e-06
     DUF1720   4 qqtGfqppqqqqpqqq......qplqpqpTGfmpqqqtgqglqpqpTGggqfap..........................glqpqqTGf....qeqaqq 66 
                 q+tGf++ +qqq+q +      +p  pq+TG+++++ t  g+ pq+TG   f+p                          +lqpq T +    q+++++
  KHJ32146.1 251 QPTGFNQGYQQQTQVDwagnpiGPSIPQQTGYLGNMYT--GFSPQQTG---FQPepaiyqndyqnlpisqsttfdpfgqhNLQPQLTSYnpytQQNPNN 344
                 67********************9*************99..9*******...8888899**********************************9999999 PP

     DUF1720  67 glqPqaT 73 
                  lqP++T
  KHJ32146.1 345 FLQPNQT 351
                 ****998 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.28
     DUF1720  15 qpqqqqplqpqpTGfmpqqqtgq..glqpqpT.....G.ggqfapglqpqqTGfqeqaqqglqPqaTG 74 
                  p  q +lqpq T ++p +q++    lqp++T     G ++++a          q+++q  l+P +TG
  KHJ32146.1 320 DPFGQHNLQPQLTSYNPYTQQNPnnFLQPNQTealipGtNNPWAT-------TNQNTNQSALKPTPTG 380
                 333336899999999998887778899999997666665555554.......4444444556666665 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 3.1
     DUF1720  37 q......glqpqpTGggqfapglqpqqTGfqeqaqq 66 
                 +       l + +TG     p lq+q TG+  + ++
  KHJ32146.1 479 SagagltRLTASKTG---NNPFLQTQYTGM--PSTK 509
                 033356688888888...444588888888..2222 PP

>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0     3e-05     0.077       7      74 ..      18      87 ..      13     100 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3e-05
                HHHHHHHHT-TT-SS--HHHHHHHHHHHHCSTCHHHHHHHHHHHHHT-..SSHHHHHHHHHHHHHHHHHS CS
         VHS  7 lekliekATdeslreedlslileicDlinekeagpkeavrlikkkins..knphvallaLklldalvkNc 74
                ++ ++ +AT+++   +  +++ +i+ +  ++ ++  e ++++ k++n+  kn   +l aLk+ld++   +
  KHJ32146.1 18 VQVKVRNATSNDPWGPTGQEMSQIAQMTFNNINDFYEIMDMLDKRLNDkgKNWRHVLKALKVLDYCLHEG 87
                56677778888777777777788888888888888899**********8889999***********9875 PP

>> ALMT  Aluminium activated malate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   1.7   0.00031       0.8     328     444 ..     117     241 ..      40     249 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00031
        ALMT 328 ellkevkvaaeeLqskldskskLlvn.sekweaakkkekaeeveekkeeekeseskkeea...eaveeaeseseksllkeskrslklskkesapaeesl 422
                 ++ ++v+v+a+eL+s +  +  L ++ s++ + +++ + +ee   ++ e+ +++ +++ +   e+  e + + e+s+ +e++ ++ +++++  p+ e+l
  KHJ32146.1 117 DVGQNVRVSAKELTSLILDEERLRTErSDRRNWKSRVTGIEEFGPSQDESMRRTRSQRLQradEEDAEYRLAIEASKYQEEEDRKRRESQRDFPEDEDL 215
                 56689************5555566552455555555555666555554444444444443333444444445555555566666666677777777755 PP

        ALMT 423 ee....kqlskeeelkelelaealsl 444
                  +    +++++e++ +ele ++alsl
  KHJ32146.1 216 AKaiklSKEEEEQRRRELEEQNALSL 241
                 55453455555666667777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1101  (0.0614089); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 3850.37
//
Query:       KHJ32147.1  [L=76]
Description: hypothetical protein EV44_g0274 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0037   17.7   0.1     0.0041   17.6   0.1    1.1  1  Egh16-like  Egh16-like virulence factor


Domain annotation for each model (and alignments):
>> Egh16-like  Egh16-like virulence factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.1   2.3e-07    0.0041       3      65 ..      19      74 ..      17      76 .] 0.79

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 2.3e-07
  Egh16-like  3 HgvitkvtGangvngpglgvadgtprdgtsrasgsqaDttvfrdkeikkkkasglGrtlgsgk 65
                Hg+++k++G++g+n p++ ++  t rdg++r + +q D    r       + + +G+t + g+
  KHJ32147.1 19 HGAVIKAVGDEGGNIPAFRID-ATSRDGSRRDP-FQGDKKHSR--I---VNVDVCGNTVEDGS 74
                ********************9.89999998666.999987433..3...23467888877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       268  (0.0149478); expected 358.6 (0.02)
Passed bias filter:                      227  (0.0126611); expected 358.6 (0.02)
Passed Vit filter:                         7  (0.000390429); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 557.87
//
Query:       KHJ32148.1  [L=388]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.11   12.3   0.0       0.24   11.3   0.0    1.5  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase
       0.12   11.9   0.0       0.26   10.8   0.0    1.5  1  Exo_endo_phos    Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.6e-05      0.24       1      48 [.     336     378 ..     336     387 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.6e-05
  Exo_endo_phos_2   1 lliisvYippsdelenlestlekllselkspkiiilGDfNakhplWgs 48 
                      +++++vY  p+d    + + l + +  +    ++ +GDfN  h  W+ 
       KHJ32148.1 336 ITFLNVYKAPQD--PAAVQLLLSWTPPT---GTVAAGDFNSVHWVWQP 378
                      679999**9999..55555555555555...59*************87 PP

>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   2.9e-05      0.26      30     168 ..     266     384 ..     244     386 .. 0.56

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 2.9e-05
                    TTSEEEEEEEBSCTCHHHHHHHHHTTCEEEEECCH................ECSSSTTSSEEEEEECSTE...EEEEEEEEEETSSSSGCEEEEEE CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  30 daDvlgLQEvdddelsriplllalggflgasstsp................tgggggggnggavlsrfpl...tslfrrtfiefndlvaalrrepl 106
                    + Dv+++QE + +              ++++   +                t    ++ + + ++ +  +   +s+                    
     KHJ32148.1 266 QLDVVLIQEPWWSRHTK--------SHPYFN---RhipltndnerpravtyTKKDPKNIHAMQIFPHSEItgdFSW-------------------- 330
                    44999999933332222........111111...122245555555566665555555555555555555554444.................... PP

                    EEEEEEEEECCCHHGHHHHHHHHHHHHHHHHHHHHHTTSEEEE................................EEE-SSSTSGGGBSCGHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................xxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 107 aakleqlniashrdhdlvrdlqllalllqvealnadrgapviv................................aGDfNarpsdddsrvlrtr 168
                                                            v++                                aGDfN++++ ++  v+r+ 
     KHJ32148.1 331 ----------------------------------------VLIdnitflnvykapqdpaavqlllswtpptgtvaAGDFNSVHWVWQPGVTRSC 384
                    ........................................44455555555555555555588899999999999******9999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       740  (0.0412739); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2934.36
//
Query:       KHJ32149.1  [L=201]
Description: hypothetical protein EV44_g3717 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1577.82
//
Query:       KHJ32150.1  [L=854]
Description: putative gas2 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-07   30.2   0.0    8.4e-07   29.0   0.0    1.6  1  GAS2      Growth-Arrest-Specific Protein 2 Domain
     0.0022   17.3   0.2       0.25   10.5   0.1    2.3  2  SPAN      Surface presentation of antigens protein


Domain annotation for each model (and alignments):
>> GAS2  Growth-Arrest-Specific Protein 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.0   9.3e-11   8.4e-07      28      63 ..     602     644 ..     581     647 .. 0.74

  Alignments for each domain:
  == domain 1  score: 29.0 bits;  conditional E-value: 9.3e-11
        GAS2  28 Yr....fgdsqklvlvRilr...stvmVRVGGGWetLeefLek 63 
                 Y+     g+    ++vR++    + vmVRVGGGW  L e+L++
  KHJ32150.1 602 YHlsrsNGEAPIKLFVRLVGengERVMVRVGGGWADLGEYLKE 644
                 44444468888999****9754678****************85 PP

>> SPAN  Surface presentation of antigens protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.6   0.0    0.0018        16     119     173 ..     170     223 ..     123     239 .. 0.85
   2 !   10.5   0.1   2.8e-05      0.25     239     322 ..     531     613 ..     489     625 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0018
        SPAN 119 ksaallssknrplesvsgkklsadlkavesvsevtdnatgisddnikalpgdnka 173
                    + +ssk rp  s s   ls  l  +es s++ d ++ i+   ++alp   k 
  KHJ32150.1 170 VLDTHFSSKPRPSSSCSSVSLSKFL-PLESYSKINDFTAMITASILQALPKLSKL 223
                 555678***************9876.69*********************987765 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 2.8e-05
        SPAN 239 laaqskpmmtifptadgvkgedssltyrfqrwgndysvniqarqagefslipsntqvehrlhdqwqngnpqrwhltrddqqnpq 322
                 l+ qs    t +p +   kg   slt   q              +  ++l+p+nt+v  r +++ +n + + +hl+r + + p 
  KHJ32150.1 531 LSPQSESKTT-VPKTFHTKGARRSLTPHSQIISTSKNHSQSQTSTPLYTLVPANTKVTTRSKNHNNNSEIRVYHLSRSNGEAPI 613
                 5666666544.5777788999999999999988776666555667789*****************************9988886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (854 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       972  (0.0542138); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 6033.13
//
Query:       KHJ32151.1  [L=653]
Description: putative f-box and wd40 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.3e-30  102.8  13.7      5e-06   27.2   0.0    7.2  7  WD40         WD domain, G-beta repeat
    1.3e-09   37.8   0.8    2.6e-09   36.8   0.8    1.6  1  F-box-like   F-box-like
    1.8e-07   31.4   0.2      0.023   15.0   0.0    5.0  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    9.8e-07   28.5   0.2    2.5e-06   27.2   0.2    1.8  1  F-box        F-box domain
    1.1e-05   24.4   0.1      0.096   11.3   0.3    3.6  2  Nup160       Nucleoporin Nup120/160
     0.0041   17.2   0.5     0.0093   16.1   0.5    1.6  1  4PPT_N       4'-phosphopantetheinyl transferase N-terminal do
     0.0054   17.2   0.3      0.021   15.3   0.0    2.0  2  Elongin_A    RNA polymerase II transcription factor SIII (Elo
     0.0087   15.9   0.1      0.022   14.6   0.1    1.7  1  F-box_4      F-box
  ------ inclusion threshold ------
       0.12   12.3   0.4        7.9    6.6   0.0    3.5  4  PQQ          PQQ enzyme repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   7.3e-09   1.4e-05       7      38 .]     321     351 ..     317     351 .. 0.86
   2 !   12.3   0.1   0.00012      0.24       9      38 .]     406     434 ..     399     434 .. 0.79
   3 !   12.6   0.1   9.8e-05       0.2       2      38 .]     440     475 ..     439     475 .. 0.85
   4 !   17.7   0.0   2.5e-06     0.005       2      38 .]     480     515 ..     479     515 .. 0.81
   5 !   27.2   0.0   2.5e-09     5e-06       1      38 []     519     557 ..     519     557 .. 0.91
   6 !   11.0   0.1   0.00031      0.62       3      38 .]     563     599 ..     561     599 .. 0.78
   7 ?   -2.4   0.0       5.6   1.1e+04      21      36 ..     623     638 ..     611     638 .. 0.57

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 7.3e-09
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 l GH +s++++  + d + +++Gs+D+t+riWd
  KHJ32151.1 321 LNGHlDSIYCI--QFDEKKIITGSRDKTIRIWD 351
                 57***9*****..55666688***********9 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00012
                 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  H +s+ +l  + d++ l++Gs Dgt+ i d
  KHJ32151.1 406 HHnQSILCL--QYDSKILVTGSSDGTCIIHD 434
                 45667****..889999****99****9865 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 9.8e-05
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++r l+ H   v +laf  d + ++++s+D t+ iWd
  KHJ32151.1 440 RPIRQLRHHtAAVLDLAF--DERHIVTCSKDITICIWD 475
                 578999999666****44..788899***********9 PP

  == domain 4  score: 17.7 bits;  conditional E-value: 2.5e-06
                 EEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 
                 ++++ l+GH ++v+++      ++    ++s+s D  v++W+
  KHJ32151.1 480 TLIKQLRGHaGPVNAV------QLrgntIVSCSGDFRVKLWN 515
                 57889****999****......444444888977*******8 PP

  == domain 5  score: 27.2 bits;  conditional E-value: 2.5e-09
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g+++++l GH ++  + +fs d++++as++ D+t+riWd
  KHJ32151.1 519 GKNIKELMGHtKGLACSQFSEDSRFIASAGNDKTIRIWD 557
                 68899999**99996666*********9999*******9 PP

  == domain 6  score: 11.0 bits;  conditional E-value: 0.00031
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  l+++ +H + v+sl  ++ +  l+sGs+D+ ++++d
  KHJ32151.1 563 ALKSIAAHdNLVRSLHIDSISGRLVSGSYDQDIKVFD 599
                 57788899444999986666666789*********98 PP

  == domain 7  score: -2.4 bits;  conditional E-value: 5.6
                 TSSEEEEEETTSEEEE CS
        WD40  21 dgawlasGsdDgtvri 36 
                 d + ++s + D+++ i
  KHJ32151.1 623 DYRRIISTGQDPKILI 638
                 3344566666888865 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.8   0.8   1.3e-12   2.6e-09       1      48 []     222     268 ..     222     268 .. 0.95

  Alignments for each domain:
  == domain 1  score: 36.8 bits;  conditional E-value: 1.3e-12
  F-box-like   1 isrLPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrrlvlr 48 
                 is+LP E+ +qI+ +L++++L ++a V+++W  + l+   +Wr+++lr
  KHJ32151.1 222 ISNLPSELAIQILTHLDQTTLRNIATVSKQWLKISLTQ-CVWREVFLR 268
                 689*******************************9977.******986 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       4.4   8.8e+03      47      68 ..     332     353 ..     328     355 .. 0.77
   2 !    6.7   0.0    0.0045       8.9      44      77 ..     412     446 ..     405     460 .. 0.75
   3 ?    0.9   0.0      0.28   5.6e+02      47      81 ..     456     490 ..     446     505 .. 0.81
   4 ?    0.8   0.0      0.31   6.3e+02      49      81 ..     498     530 ..     473     540 .. 0.80
   5 !   15.0   0.0   1.2e-05     0.023      44      88 ..     535     578 ..     509     581 .. 0.84
   6 ?    4.8   0.0     0.017        34      37      82 ..     570     615 ..     568     644 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 4.4
  ANAPC4_WD40  47 kpdgklLavaysdgevrlldae 68 
                  + d+k +  +  d ++r+ d +
   KHJ32151.1 332 QFDEKKIITGSRDKTIRIWDLK 353
                  5678888888889999988865 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0045
  ANAPC4_WD40  44 LaWkpdgklLavaysdgevrlldaesg.kvvhsls 77 
                  L+ + d k+L+ + sdg++ ++d+++  + +++l+
   KHJ32151.1 412 LCLQYDSKILVTGSSDGTCIIHDIKNRyRPIRQLR 446
                  6778899****************998524455555 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.28
  ANAPC4_WD40  47 kpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                    d++ ++   +d ++ + d ++g+++++l+ ++ 
   KHJ32151.1 456 AFDERHIVTCSKDITICIWDRNTGTLIKQLRGHAG 490
                  55888899999999**************9987776 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.31
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhslsvkse 81 
                   g+ ++    d +v+l ++ +gk +++l  +++
   KHJ32151.1 498 RGNTIVSCSGDFRVKLWNIDTGKNIKELMGHTK 530
                  688888999999***********9999866655 PP

  == domain 5  score: 15.0 bits;  conditional E-value: 1.2e-05
  ANAPC4_WD40  44 LaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                   ++++d +++a a +d ++r+ da++g+ ++s+ ++++  v +l+
   KHJ32151.1 535 SQFSEDSRFIASAGNDKTIRIWDANTGEALKSIAAHDNL-VRSLH 578
                  57999****************************999985.77776 PP

  == domain 6  score: 4.8 bits;  conditional E-value: 0.017
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksek 82 
                  +d+ vrsL+       L+ +  d  ++++d+++g ++  ++ ++++
   KHJ32151.1 570 HDNLVRSLHIDSISGRLVSGSYDQDIKVFDMSTGAMLLDFPKWHSS 615
                  7889999999999999*********************999988776 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.2   1.3e-09   2.5e-06       3      46 ..     222     265 ..     220     267 .. 0.93

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 1.3e-09
                 HHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHHH CS
       F-box   3 lsrLPsevlrhILerLplsdllalrrVSkgwrilidsdrlwcks 46 
                 +s+LPse+  +IL +L+ ++l +++ VSk w ++      w++ 
  KHJ32151.1 222 ISNLPSELAIQILTHLDQTTLRNIATVSKQWLKISLTQCVWREV 265
                 8*********************************9999999875 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0   0.00044      0.87     225     256 ..     330     361 ..     323     381 .. 0.88
   2 !   11.3   0.3   4.8e-05     0.096     154     257 ..     455     568 ..     432     581 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00044
                 ....TTTEEEEEETT-EEEEEETTTTEEEEEE CS
      Nup160 225 vveigqtylfalsrdgkLrvWnlltgkclati 256
                 +++ +++ + + srd+++r+W+l+ + c+  i
  KHJ32151.1 330 CIQFDEKKIITGSRDKTIRIWDLKKYICTLII 361
                 666678889999****************9765 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 4.8e-05
                 EE-SSSEEEEEETTS-EEEEEE.......ETTEEEEEEEEE-------B--...TTTT..TSS--SS---TT-ECEEEEET.....TTTEEEEEETT-E CS
      Nup160 154 aavssnellvsladggllklkr.......dedggawkesvfepksfllsls...gllg.lladpsrrksgasvalsldvavavveigqtylfalsrdgk 241
                  a +  +++ +++d ++++ +r       +  g+a+ ++ +++++++  ++   + ++ ++ d+ +  +  + + +  + ++++e ++ +++++  d++
  KHJ32151.1 455 LAFDERHIVTCSKDITICIWDRntgtlikQLRGHAGPVNAVQLRGNTIVSCsgdFRVKlWNIDTGKNIKELMGHTKGLACSQFSE-DSRFIASAGNDKT 552
                 6677788888888888888888888888877789999999999888765553335777888888888888887777777777887.************* PP

                 EEEEETTTTEEEEEEE CS
      Nup160 242 LrvWnlltgkclatid 257
                 +r+W+ +tg  l +i 
  KHJ32151.1 553 IRIWDANTGEALKSIA 568
                 *********9999875 PP

>> 4PPT_N  4'-phosphopantetheinyl transferase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.5   4.7e-06    0.0093      15      55 ..     104     150 ..      93     158 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 4.7e-06
      4PPT_N  15 aeFlaGRicAraalarlglea......vpllsgerraPlwpaglvgS 55 
                 +  + GRi  ++al+rlg+e+       p++ + +r P  p+gl+gS
  KHJ32151.1 104 SRITWGRIRSHSALSRLGFESdneflhSPVPGSGNRPPKIPHGLSGS 150
                 55578*************9865555557***99*************9 PP

>> Elongin_A  RNA polymerase II transcription factor SIII (Elongin) subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.5   2.9e+03      64      85 ..      72      97 ..      38     105 .. 0.62
   2 !   15.3   0.0   1.1e-05     0.021       4      81 ..     222     311 ..     219     320 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.5
   Elongin_A 64 p....kswrelYeklkkereeklkea 85
                +     s r+l++k  ++ + ++++ 
  KHJ32151.1 72 RkgvtYSIRNLFKKASESIKSRRRNI 97
                13444677777777777666665554 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 1.1e-05
   Elongin_A   4 vGdvpyellrpiLekctpeqLreiEensphlaee..tdelWkklikrdfpeeskekste..........pkepkswrelYeklkkereek 81 
                 + ++p el+ +iL +     Lr+i + s++  +   t+ +W+++  r+  +  +  +             +++++w++lY+  ++ r++ 
  KHJ32151.1 222 ISNLPSELAIQILTHLDQTTLRNIATVSKQWLKIslTQCVWREVFLREQTKTYASSKPVllgaglglpsFSSNNDWKDLYRIREQLRKNW 311
                 789***************************995555*******99888777766444434788888866444489*****9998887765 PP

>> F-box_4  F-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.1   1.1e-05     0.022       4      46 ..     221     263 ..     218     279 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.1e-05
     F-box_4   4 sLssLPlevlqhiaslLDsfsLsqLslvskllrevcssllqer 46 
                  +s+LP e+  +i++ LD+++L +++ vsk+  +++ +    r
  KHJ32151.1 221 FISNLPSELAIQILTHLDQTTLRNIATVSKQWLKISLTQCVWR 263
                 689***************************9988877665555 PP

>> PQQ  PQQ enzyme repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.46   9.2e+02       2      24 ..     461     483 ..     460     486 .. 0.80
   2 ?   -1.9   0.0       1.9   3.8e+03       3      23 ..     502     522 ..     500     524 .. 0.69
   3 ?   -0.0   0.0      0.49   9.8e+02       7      21 ..     548     562 ..     542     566 .. 0.81
   4 ?    6.6   0.0     0.004       7.9       1      23 [.     584     606 ..     584     609 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.46
                 EEEEEETTSEEEEEETTTCCEEE CS
         PQQ   2 vvylgsadGylyAlDadTGkvlW 24 
                 +++ +s+d +++  D++TG+++ 
  KHJ32151.1 461 HIVTCSKDITICIWDRNTGTLIK 483
                 56667888899999*****9986 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.9
                 EEEEETTSEEEEEETTTCCEE CS
         PQQ   3 vylgsadGylyAlDadTGkvl 23 
                 ++ +s d ++   ++dTGk +
  KHJ32151.1 502 IVSCSGDFRVKLWNIDTGKNI 522
                 5666666666667999**976 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.49
                 ETTSEEEEEETTTCC CS
         PQQ   7 sadGylyAlDadTGk 21 
                  +d +++  Da+TG+
  KHJ32151.1 548 GNDKTIRIWDANTGE 562
                 568888999*****8 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.004
                 TEEEEEETTSEEEEEETTTCCEE CS
         PQQ   1 gvvylgsadGylyAlDadTGkvl 23 
                 g+++ gs+d  +  +D++TG +l
  KHJ32151.1 584 GRLVSGSYDQDIKVFDMSTGAML 606
                 567889**************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (653 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       559  (0.0311785); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 4227.44
//
Query:       KHJ32152.1  [L=222]
Description: hypothetical protein EV44_g4975 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       548  (0.030565); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1577.88
//
Query:       KHJ32153.1  [L=410]
Description: putative nucleotide exchange factor sil1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-12   46.7   1.5    3.8e-12   46.0   1.5    1.3  1  SIL1      Nucleotide exchange factor SIL1
  ------ inclusion threshold ------
       0.43   11.2   4.9        5.1    7.8   0.1    2.5  2  MSP7_C    MSP7-like protein C-terminal domain


Domain annotation for each model (and alignments):
>> SIL1  Nucleotide exchange factor SIL1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.0   1.5   4.2e-16   3.8e-12      25     173 ..     161     336 ..     141     375 .. 0.78

  Alignments for each domain:
  == domain 1  score: 46.0 bits;  conditional E-value: 4.2e-16
        SIL1  25 rlekaLddlielshDykfGvkiishefellknl.........slndklpvelrelsariigssLRNNpeavenvlekkp.....efvkelfeelselsk 109
                 ++++aL+dl el+hD+ +G +i +++  +l+ l         +   + +++ + ++a+i+ s   NNp a++++ + k+     + +++  +e++e ++
  KHJ32153.1 161 SFDQALEDLSELAHDIYYGREIAREDL-VLELLvcltlglerENTPNREINRERIAASILSSAFQNNPAAIKEISSVKRnimypSCISNSANEVKEKEN 258
                 6899********************998.44555788999887555566688889999*****************9887523333555555555555444 PP

        SIL1 110 ...........kksdvliKRylsilqeLlqnsefvtkyekkskletLieiy.eikd..kqikikvlelledllleeee 173
                            +++d   K+ +s ++ Ll++++f   y +++++e L  ++ ++ d  + ++ k+ ell d +l+e+ 
  KHJ32153.1 259 fvsifrskleqENDDHKLKSKISTISRLLKSESFRDLYLENEGMELLLAVFlKKGDnfNAVRKKIGELLIDNFLDESY 336
                 999999999999999999**************9999998899*********666553346899999999999888866 PP

>> MSP7_C  MSP7-like protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   1.6    0.0082        74      55     103 ..     243     291 ..     201     300 .. 0.76
   2 ?    7.8   0.1   0.00057       5.1      50      89 ..     302     341 ..     295     345 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0082
      MSP7_C  55 daffkkeenenskadslveifkkaLkdkkfreefknfiyglYsfaKknn 103
                  ++++++ ne +++++ v+if+  L+ ++  +++k+ i+++    K ++
  KHJ32153.1 243 PSCISNSANEVKEKENFVSIFRSKLEQENDDHKLKSKISTISRLLKSES 291
                 4677776666677788999999999999999999988888866666555 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00057
      MSP7_C  50 ikkLidaffkkeenenskadslveifkkaLkdkkfreefk 89 
                 ++ L+ +f+kk++n n  ++++ e++  ++ d+++ +ef+
  KHJ32153.1 302 MELLLAVFLKKGDNFNAVRKKIGELLIDNFLDESYGAEFN 341
                 567999999999999999********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       790  (0.0440627); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3048.64
//
Query:       KHJ32154.1  [L=633]
Description: putative pi-transporter a-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-26   92.4  20.1    1.7e-15   56.8   3.7    2.1  2  Sugar_tr  Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   8.5   4.4e-15     8e-11      11     190 ..      90     290 ..      81     318 .. 0.87
   2 !   56.8   3.7   9.7e-20   1.7e-15     271     452 .]     337     527 ..     330     527 .. 0.83

  Alignments for each domain:
  == domain 1  score: 41.5 bits;  conditional E-value: 4.4e-15
                 HHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTT.SS-TGGGGG CS
    Sugar_tr  11 lfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgk.nsvevlivg 108
                 l+gY ++ ig  + + +++  +++ +++  +   + ++ +++ + ++G i+G++++g++gd +GR+++l+  a++++ g v+  a+ g+  + +v++ +
  KHJ32154.1  90 LEGYVLFSIGNLSPFFETIWPQCWRTHEV-CS--KNWIHAVTYLEVLGIIVGQILVGIMGDALGRRWGLIHDAAVMFLGLVMLTASWGAsLNGWVIFYA 185
                 78999999999999999999999999997.53..46999999999*****************************************9888555665555 PP

                 ..HHHHHHHHHHHHHHHHHHHHTTS.........-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-............TTHHHHHHHCCHHHHHHH CS
    Sugar_tr 109 ..RvlvGigvGlasvlvPmyisEiA.........pkklRgalvslyqlaitfGilvaaifglglnktsn............adgwrillglqlvpalll 184
                    ++ GigvG+++ ++ + + E++            +Rg+ v++  l+  +G+++  ++      + n            ++++r+ ++l ++ +l l
  KHJ32154.1 186 wsLFIYGIGVGGEYPMTATAAMENSttgrvadreDRLHRGRKVTMAFLMQGWGQFFNVGILILSLLIFNggaqlpysvvaaQWTFRVSFALPAIGTLWL 284
                 559**********************8888887776779******************99888777666666899******999999******99999988 PP

                 HHHGGG CS
    Sugar_tr 185 lilllf 190
                 ++ ++f
  KHJ32154.1 285 VYHRWF 290
                 887765 PP

  == domain 2  score: 56.8 bits;  conditional E-value: 9.7e-20
                 HHHHHHTTTHHHHSS-THH.............HHHHHHHHHHHHHHHHHHHHHHHH..S-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHHHH CS
    Sugar_tr 271 naimyysptifenlglsks.............llvtiivgvvnfvatfvaiflvdr..fGRRtllllGaagmaicfvilgivalllvakskaasivaiv 354
                 n +++y+ ++f+++ +s                 ++i+ + v +v    a fl+d+   GR+ +  +G+a+++i+fv+     + +  + + ++   ++
  KHJ32154.1 337 NDVFFYGNKLFQSAFISVIepdalrsgnvitgWKWSIVNVSVSMVGYYLATFLIDHklYGRKWMQQVGFAMCFILFVVPE-FNYDYYRSIEHIKEFQVM 434
                 67788888888888776545557777775555667888888888888888899*97668********************7.666666665455555444 PP

                 HHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGGT CS
    Sugar_tr 355 fialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrtleeieelf 452
                 f++   ++ ++g+++v +++++E++p++vR++a  +++a+     +l s+l+ +i+++ +    f v   + +++++ +++fvp t g++l e+e+ +
  KHJ32154.1 435 FFMSS-FFNQCGPNSVTFLIAAEVYPEAVRASAHGFSAAIGKAGALLASVLYHYIDDQTK----FHVVPWFGLAGMLLTWLFVPDTTGLDLSEQERRW 527
                 44433.57789*************************************************....89999999**********************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (633 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       765  (0.0426683); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.42
# Mc/sec: 4565.89
//
Query:       KHJ32155.1  [L=555]
Description: putative amino acid transporter protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.6e-54  183.4  56.0    7.8e-54  183.1  56.0    1.0  1  AA_permease_2  Amino acid permease
    3.5e-26   91.9  48.3    4.7e-26   91.4  48.3    1.0  1  AA_permease    Amino acid permease
  ------ inclusion threshold ------
        8.4    5.8  15.3      0.081   12.4   4.4    2.6  2  DUF1129        Protein of unknown function (DUF1129)


Domain annotation for each model (and alignments):
>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.1  56.0   1.3e-57   7.8e-54       1     423 [.      50     494 ..      50     497 .. 0.88

  Alignments for each domain:
  == domain 1  score: 183.1 bits;  conditional E-value: 1.3e-57
  AA_permease_2   1 lsllsafalvigsvigsgifvkn...laasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkva....flsawfnwfayv 89 
                    +s+l++f+ ++gs+  ++ ++ +   +++s+g++ ++w  ++  i++++v+l + El+s +p+sgG+y ++++++++k+     +l++++n+++y+
     KHJ32155.1  50 FSYLTVFGQSFGSMGIAPAIAESiafSLGSAGTVGMVWTYLVGCILLIPVSLSLGELGSSMPTSGGLYYWVARLSPPKPRaffcWLAGYMNTLGYI 145
                    799***********9999998889999***********999999999**********777***************98888889999********** PP

  AA_permease_2  90 pvlasilsvaasyllnalgp....dlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl.....s 176
                       as++++a+  l   ++      +++++++ ++i+ a ++l+++++++ ++ + k++ +  +l + +++++++il+++t + + ++ +      
     KHJ32155.1 146 SIYASTIYAATLILGATISIsvngGYTPTKYHNFGIFLATILLTFAMTCVRTSVLNKLNLFYLYLQLGMLIALIVILAVFTDSEKKNTPSfvfleF 241
                    *9988887777777666544455588899***************************************9999999999999877666655677666 PP

  AA_permease_2 177 tetdtffpngwpgvllgllivlwsfdGfesaanvseevkk..kdvpkaifigllivlvlyllvniaflgvvpddeianlsn.lgsv.aalffeavg 268
                    ++t+ + +n+w +++ ++l+ +w+++Gfesaa ++ee+ +  k vp+a++++l+++++ ++ v ++++++++ d i  + + lg++ a++ f+ +g
     KHJ32155.1 242 QNTGAWSSNFWAFMM-AFLTPVWVVSGFESAATIAEEASNaaKAVPFAMVSSLVTATFTGWAVIVTIAFCMGTDVIGIVTTeLGQPlAQIAFNSLG 336
                    666667777887765.566699***************9998789********************************65544466654899999999 PP

  AA_permease_2 269 gkvvaiivvilialsllgaintavigssrvlealardgvlP..rffakvnkfgspiraiiltaivslillllfllassaaynfllsvsslgliisy 362
                     k +++ + i+++++++ +   +++++sr  +a+ard ++P  +f++  ++   p ra+ ++a++  ++  l++l+++ a+n +++++ +gl++ y
     KHJ32155.1 337 -KSGSVGILIMLWFCSICNCSILMVAASRETFAFARDHGIPgsTFLRVLSAGAVPARAVGFVAVCG-AFEGLLMLVNTIAINSIFNLAIMGLYFAY 430
                    .999999999********************************99999999***************9.66667777789****************** PP

  AA_permease_2 363 llliigalilrkkrphl...krpgkilvaiigalfllfllvalffppkgpatqssliytiiltv 423
                    ++++i++l++   +p     + +  +  a+ ++++ +f++++l fp+    t ++++y++++++
     KHJ32155.1 431 CMPLILRLVYDNFKPGVwymGDKLSYASALYSVIWMTFIFILLLFPSYPNPTRDEMNYAVVVLG 494
                    ****99999877767653444455599*******************99999********88876 PP

>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.4  48.3   7.8e-30   4.7e-26      18     463 ..      72     505 ..      58     508 .. 0.84

  Alignments for each domain:
  == domain 1  score: 91.4 bits;  conditional E-value: 7.8e-30
  AA_permease  18 glgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpe....lGfviGln....ylfswitvlaleltaasiliqfwelv 107
                  ++++ l++aG +g++  yl++++ ++ v lslge+ + +p sgg y++++r   p+    + +  G++    y + ++ ++ +++ +++ +i++  + 
   KHJ32155.1  72 SIAFSLGSAGTVGMVWTYLVGCILLIPVSLSLGELGSSMPTSGGLYYWVARLSPPKprafFCWLAGYMntlgYISIYASTIYAATLILGATISISVNG 169
                  78899***********************************************99973333444444447778************99999999999555 PP

  AA_permease 108 tdlpkawvt....gavflvvlliinlvgvkvygeaefilalikiiaiiafiivg.iillaggkpnkgagfrflgdngsifknnlppgfakeeegafkn 200
                     p + +      + ++++ ++++ v   v  +  ++++ + + ++ia+i+++ +++ +++k+++   f  +++ g+      +        ++f +
   KHJ32155.1 170 GYTP-TKYHnfgiFLATILLTFAMTCVRTSVLNKLNLFYLYLQLGMLIALIVILaVFTDSEKKNTPSFVFLEFQNTGA-----WS--------SNFWA 253
                  5555.322245436677777777888888889999*******************555555555555524444444444.....44........459** PP

  AA_permease 201 fisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaaspfvifikesgvsvlaplinavilt 298
                  f+++f + v   +G+e+ a+ia+E+++ +k++P a+ + +++ t+    ++++i ++++++  g+++  +   ++  i+++++g s+   +++++ + 
   KHJ32155.1 254 FMMAFLTPVWVVSGFESAATIAEEASNAAKAVPFAMVSSLVTATFTGWAVIVTIAFCMGTDVIGIVTTELG-QPLAQIAFNSLGKSGSVGILIMLWFC 350
                  *******************************************************************7664.59************************ PP

  AA_permease 299 aalssansslysasRvlyslakdglaP..kvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsyl.rfRka 393
                  ++ ++++ ++++asR  +++a+d  +P  ++l+++s + vP+ra+ ++++++++  ll+ +n++ +i + f lai +l++  + +li+   + +f++ 
   KHJ32155.1 351 SICNCSI-LMVAASRETFAFARDHGIPgsTFLRVLSAGAVPARAVGFVAVCGAFEGLLMLVNTI-AINSIFNLAIMGLYFAYCMPLILRLVYdNFKPG 446
                  *****99.788999**************************************************.5555566888888888888888766557***** PP

  AA_permease 394 lkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliil 463
                    y g    +l++ +al+   ++++++++ i+ll+ ++  +++     + +++a++++  + v+++  ++
   KHJ32155.1 447 VWYMGD---KLSYASALY---SVIWMTFIFILLLFPSYPNPTR-----DEMNYAVVVLGSVLVFCVCYYW 505
                  999999...778888877...5689999999999999988888.....7788887777666666665555 PP

>> DUF1129  Protein of unknown function (DUF1129)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   2.4      0.27   1.6e+03      87     132 ..     210     257 ..     189     310 .. 0.66
   2 ?   12.4   4.4   1.3e-05     0.081      91     197 ..     399     505 ..     392     510 .. 0.67

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.27
     DUF1129  87 lllalfallfgilalfskkkqtas..iGlitlllvalvgGlamvlvyr 132
                 l l+++ +l+ ila+f++++++++    ++    +++ +  +  +++ 
  KHJ32155.1 210 LQLGMLIALIVILAVFTDSEKKNTpsFVFLEFQNTGAWSSNFWAFMMA 257
                 446677777777777777666665223333334444544444555544 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 1.3e-05
     DUF1129  91 lfallfgilalfskkkqtasiGlitlllvalvgGlamvlvyrlltrekkkkkrpplw....krllilllllvvwlvlftlvallpaviNpv...Lpplv 182
                 +  ++ g+l+l+++       ++  l++++l + + m l+ rl++     + +p++w    k   +++l  v+w+ +++++ l+p++ Np+   ++  v
  KHJ32155.1 399 VCGAFEGLLMLVNT--IAI-NSIFNLAIMGLYFAYCMPLILRLVYD----NFKPGVWymgdKLSYASALYSVIWMTFIFILLLFPSYPNPTrdeMNYAV 490
                 44455555555554..222.25777777777777777777777776....556666633336788899999*******************833244555 PP

     DUF1129 183 liiigviafvvryyl 197
                  ++  v+ f v yy+
  KHJ32155.1 491 VVLGSVLVFCVCYYW 505
                 555578888898988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       776  (0.0432818); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 3985.65
//
Query:       KHJ32156.1  [L=324]
Description: putative nadh-cytochrome b5 reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.8e-34  118.0   0.0    4.8e-34  117.3   0.0    1.4  1  NAD_binding_1  Oxidoreductase NAD-binding domain
    1.9e-24   85.9   0.0    3.4e-24   85.1   0.0    1.4  1  FAD_binding_6  Oxidoreductase FAD-binding domain
    1.1e-07   32.2   0.0    0.00028   21.0   0.0    2.3  2  NAD_binding_6  Ferric reductase NAD binding domain


Domain annotation for each model (and alignments):
>> NAD_binding_1  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.3   0.0     8e-38   4.8e-34       1     108 [.     186     294 ..     186     295 .. 0.98

  Alignments for each domain:
  == domain 1  score: 117.3 bits;  conditional E-value: 8e-38
                    EEEEGGGGHHHHHHHHHHHHHCTTCSEEEEEEEESSGCGSTTHHHHHHHHHHCTTEEEEEEEESSCTTTSSSEESSHHHHHHHHHHH.HSSTTEEE CS
  NAD_binding_1   1 miagGtGiaPvrsvlraileeakdktkvvlvyGnrteedllyreeleelakklpgrlkvvavvsreeagweggkgrvqdalleells.lkkeethv 95 
                    +iagGtGiaP+++++rai+++++d+tkv+lv+Gn teed+l+r+el+el++++p+r++ ++v+++++++w+g+kg+++++ll+++l+  k+e+  +
     KHJ32156.1 186 LIAGGTGIAPMYQLIRAIFKNPTDNTKVTLVFGNVTEEDILLRKELQELENTYPQRFRAFYVLDNPPKSWSGEKGYISKHLLKTVLPePKEENIKI 281
                    7**************************************************************************************9899***** PP

                    EEECSHHHHHHHH CS
  NAD_binding_1  96 yvCGppgMikavr 108
                    +vCGpp+M ka++
     KHJ32156.1 282 FVCGPPPMYKAIS 294
                    *********9975 PP

>> FAD_binding_6  Oxidoreductase FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.1   0.0   5.7e-28   3.4e-24       2      97 ..      77     174 ..      76     176 .. 0.94

  Alignments for each domain:
  == domain 1  score: 85.1 bits;  conditional E-value: 5.7e-28
                    EEEEEEEECCTTEEEEEEEESTTTS-----TT-EEEEEEC..ETTCCEEEEEE.BSSTTECCEEEEEEE--TT-HHHHHHHCS-TT-EEEEEEEE- CS
  FAD_binding_6   2 lkltekeevsedtrifrfklpsekqklglpvGqhvflrlk..ikgeaviRsYtpissenekGelellvkvypgGkmsqaLdelkigdtleikGPlG 95 
                    lkl+++e+++++t++frf+lp+++q+ gl +++ +  r+k    ++aviR+Ytp+s+e+e G+l+llvk+yp G ms++++e+ +g+tle+kGP+ 
     KHJ32156.1  77 LKLDSVETINHNTKKFRFALPEKEQVSGLETASCLLTRYKgpDMEKAVIRPYTPTSDEDEIGYLDLLVKKYPTGIMSSHFHEMMPGQTLEFKGPIV 172
                    6899************************************7444889***********************************************97 PP

                    SE CS
  FAD_binding_6  96 kf 97 
                    k+
     KHJ32156.1 173 KY 174
                    65 PP

>> NAD_binding_6  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   4.7e-08   0.00028       1      65 [.     181     240 ..     181     248 .. 0.86
   2 !    8.7   0.0    0.0003       1.8     123     151 ..     265     293 ..     263     296 .. 0.86

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 4.7e-08
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6   1 yenvllvagGiGitpfisilkdllkkskkealktkkikliwvvressslewfkdvLneleeekse 65 
                    ++++ l+agG+Gi+p++ +++ ++k+      +++k++l++ +  ++++ + k  L+ele++ ++
     KHJ32156.1 181 HNHIALIAGGTGIAPMYQLIRAIFKNPT----DNTKVTLVFGNVTEEDILLRK-ELQELENTYPQ 240
                    6789**********************98....99999**99999998886555.88888887665 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0003
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6 123 evlkdiaskhknssvgvfvCGppklvkev 151
                     +lk++  + k++++ +fvCGpp + k +
     KHJ32156.1 265 HLLKTVLPEPKEENIKIFVCGPPPMYKAI 293
                    67888888999************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 2596.55
//
Query:       KHJ32157.1  [L=264]
Description: putative centromere binding protein cbh2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.4e-27   92.5   3.8    3.1e-26   90.9   3.8    1.9  1  HTH_ABP1_N   Fission yeast centromere protein N-terminal doma
    2.5e-10   40.2   0.2    2.5e-10   40.2   0.2    2.5  3  HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain
  ------ inclusion threshold ------
       0.71   10.3   2.7        2.2    8.7   0.1    2.4  2  YqzL         YqzL-like protein


Domain annotation for each model (and alignments):
>> HTH_ABP1_N  Fission yeast centromere protein N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.9   3.8   5.1e-30   3.1e-26       2      60 ..       3      61 ..       2      62 .. 0.98

  Alignments for each domain:
  == domain 1  score: 90.9 bits;  conditional E-value: 5.1e-30
  HTH_ABP1_N  2 RkaiskeqkkaLRawafqqnprpsqkaliaWFeqeygqkisqstvSeiLSskYayLDda 60
                Rk+i k+++++LRaw++qq+prps++++i+WFe++++qk++q+t+S++LS++Y++LDd+
  KHJ32157.1  3 RKSILKRERRELRAWYIQQQPRPSHRECITWFEEKFHQKLTQGTISKSLSHRYSHLDDY 61
                99*******************************************************97 PP

>> HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1      0.27   1.6e+03       5      16 ..      11      22 ..       8      35 .. 0.78
   2 !   40.2   0.2   4.2e-14   2.5e-10       1      65 [.      78     146 ..      78     147 .. 0.93
   3 ?   -2.6   0.0      0.96   5.7e+03       4      15 ..     240     251 ..     226     256 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.27
                 HHHHHHHHHHHC CS
  HTH_Tnp_Tc5  5 EkaLleWirqlr 16
                  + L+ W+ q++
   KHJ32157.1 11 RRELRAWYIQQQ 22
                 688999999975 PP

  == domain 2  score: 40.2 bits;  conditional E-value: 4.2e-14
                  THHHHHHHHHHHHHH...C-CT---SCHHHHHHHHHHH.HHSSSCT-TT-S--CHHHHHHHHHTS--XX CS
  HTH_Tnp_Tc5   1 spelEkaLleWirql...rergipitgelirekAqela.slaadlgepdfkaSkgWldrFkkRhglkrr 65 
                  +p lEk L eW +     r   +++t  ++ +kA e++ + +++ + p++++S+gWl + k R++ k++
   KHJ32157.1  78 WPILEKLLFEWQQSVeaqRDGSASVTSDALVAKAMEIWpQIPEYRDQPQPLFSSGWLTNYKTRYNSKTQ 146
                  899********999887677789*****************************************98875 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 0.96
                  HHHHHHHHHHHH CS
  HTH_Tnp_Tc5   4 lEkaLleWirql 15 
                  +E++L+ +i+++
   KHJ32157.1 240 QEQQLQLHIENT 251
                  667777777665 PP

>> YqzL  YqzL-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.6      0.11   6.8e+02      25      39 ..     144     159 ..     141     165 .. 0.74
   2 ?    8.7   0.1   0.00036       2.2      14      27 ..     217     230 ..     215     247 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.11
        YqzL  25 esqeapeeqedela.e 39 
                 ++q+++++q+++++ +
  KHJ32157.1 144 KTQQQSQHQQSHIEaN 159
                 6788899999988744 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00036
        YqzL  14 dtYLLyKEleresq 27 
                 +tYL++K ++++s+
  KHJ32157.1 217 QTYLMFKACQEDSK 230
                 7**********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1260  (0.0702772); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1942.13
//
Query:       KHJ32158.1  [L=382]
Description: putative translation factor pelota [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-51  173.7   0.0    2.5e-51  173.0   0.0    1.3  1  eRF1_1    eRF1 domain 1
    5.2e-22   78.6   0.0    7.9e-22   78.0   0.0    1.3  1  eRF1_2    eRF1 domain 2
    2.7e-19   69.7   0.0      5e-19   68.9   0.0    1.5  1  eRF1_3    eRF1 domain 3


Domain annotation for each model (and alignments):
>> eRF1_1  eRF1 domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.0   0.0   4.1e-55   2.5e-51       1     128 [.       1     129 [.       1     130 [. 0.99

  Alignments for each domain:
  == domain 1  score: 173.0 bits;  conditional E-value: 4.1e-55
                 HEEEEECTBTTSCCEEEEEE-SCHHHHHHHHHCHTTHEEEEEEEECHHH.......--CEEEEEEEEEEEEEEECTTSSEEEEEEEEEEGGGG--TTSE CS
      eRF1_1   1 mkllkrdlekdgsgsvtLipeddedlwhlynliapgdsvrastvrkvqresstgsreservklkLtikvekvdfdkdagvlrisGkvieenehvklgaf 99 
                 m+l+k+d+e+dgsg++tL pe++ed+wh+ynlia gd +ras++r+v++es+tgs++s+rv+++L i v+ +dfd++ag+l++sG+v+een+ v++gaf
  KHJ32158.1   1 MRLIKQDIEHDGSGTATLFPEEPEDMWHAYNLIAAGDHLRASAIRRVTTESTTGSTSSHRVHTNLNIIVKLLDFDPQAGQLHVSGQVAEENKWVRVGAF 99 
                 9************************************************************************************************** PP

                 EEEEE-TTSEEEEEECE.ESHHHHHHHHHH CS
      eRF1_1 100 htldlelkrpftiikee.wdsfalerLkea 128
                 htldlel+r+fti+k+  wds+al++L+ea
  KHJ32158.1 100 HTLDLELHRNFTIEKKDgWDSVALDALREA 129
                 ***************888**********98 PP

>> eRF1_2  eRF1 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.0   0.0   1.3e-25   7.9e-22       4     131 ..     140     267 ..     137     269 .. 0.92

  Alignments for each domain:
  == domain 1  score: 78.0 bits;  conditional E-value: 1.3e-25
                 EEEEETTEEEEEEEESSCEEEEEEEE------BSTTBSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHTTTESEEEEEESSTHHHHHHHHHHHHHHH CS
      eRF1_2   4 livldegeAtigllkgsrtevlkkievsvPkKhkrGgqsarrfeRlreekleeflkkvaeaankafllvdkdklkgiilagpgfvkeefldkdlldael 102
                 +iv++eg A+i+l+++++t ++k+ievsvPkK+  G++  +      e+ + +f++   e ++++   +d  + + +++a+pgf++  f ++++ +a +
  KHJ32158.1 140 AIVMQEGIANICLITEYQTILKKRIEVSVPKKRA-GKSVDH------EKGIIKFYDICLETLKRH---FDLAQPRPVLIASPGFIAAGFQKYIFDEAMR 228
                 8********************************5.766666......8*****************...79999*********************99999 PP

                 HT........CCEEEEE-S-TSCHHHHHHHHC..CHHHH CS
      eRF1_2 103 kk........kviklvdvsyggesglnevlek..aaevl 131
                 +         k ++++++s+g+ ++lnevl+   + e+l
  KHJ32158.1 229 TGnrplldnkKNFVIIHCSSGHLHSLNEVLKSvqVLEKL 267
                 9899*****999*******************95555555 PP

>> eRF1_3  eRF1 domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.9   0.0   8.3e-23     5e-19       1     113 []     272     375 ..     272     375 .. 0.94

  Alignments for each domain:
  == domain 1  score: 68.9 bits;  conditional E-value: 8.3e-23
                 HHHHHHHHHHHHHHHHCTCSSEEESHHHHHHHHHTT-EE....EEEEEHCHHTSSSH.HHHHS-HHH-HHHHHHHHHHHHHHHHHTT-EEEEE-TTSHH CS
      eRF1_3   1 liqekklleefleelakdtgkavYGveevlkalemgAve....tLLvseelersrdt.lkekvketgeelelvelieelvenveesgakveiissesee 94 
                 +++e++l++e+++ l+kd+g+a+YG +ev+ka++ gAv     tLL+   l+rs+ + ++++             +  lv++v+e g++v i+ss++e+
  KHJ32158.1 272 YAKETQLMDELMKCLRKDDGRAWYGSNEVEKAVMQGAVGrgggTLLINHCLFRSQEIgIRKR-------------WVALVDKVKEDGGDVRILSSDHES 357
                 689***********************************644449***********9999988.............9*********************** PP

                 HHHHHHHTTTEEEEESS-- CS
      eRF1_3  95 GeqlvkafgGiaaiLRykv 113
                 G++l +++g iaaiL y++
  KHJ32158.1 358 GKRL-EGLGNIAAILTYPL 375
                 ****.************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       602  (0.0335769); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.39
# Mc/sec: 2909.04
//
Query:       KHJ32159.1  [L=176]
Description: hypothetical protein EV44_g0626 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00092   19.2   2.1     0.0011   18.9   2.1    1.1  1  Myc_target_1    Myc target protein 1
  ------ inclusion threshold ------
      0.013   15.3   0.7      0.016   15.0   0.7    1.2  1  DUF3328         Domain of unknown function (DUF3328)
      0.035   14.9   3.5      0.056   14.2   3.5    1.4  1  PHC2_SAM_assoc  Unstructured region on Polyhomeotic-like prot
      0.056   12.3   0.0      0.069   12.0   0.0    1.0  1  Amnionless      Amnionless
       0.23   11.3   1.1       0.29   11.0   1.1    1.3  1  Tmemb_9         TMEM9
        1.4    8.9   6.0        3.2    7.8   6.0    1.6  1  DUF4083         Domain of unknown function (DUF4083)
        7.9    6.4   6.1        5.2    7.0   3.8    1.8  2  TMEM154         TMEM154 protein family


Domain annotation for each model (and alignments):
>> Myc_target_1  Myc target protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   2.1   4.3e-07    0.0011      11      97 ..      17     105 ..       7     131 .. 0.73

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 4.3e-07
  Myc_target_1  11 eilesfdledlilaFcvSmvvGLllgaliyvlltwlsrrra.saritrrssrrsrssssssssrsrlgfyrsssy....drrSnlslasals 97 
                   e ++s  + +l+++  v + + L+l a++ v  t+  rrra s +   +++ +   ++++++ + ++ f+rsssy    +++S l   s ls
    KHJ32159.1  17 EQHNSSTMINLLITLLVLIFISLILTAVLLVARTI-RRRRAlSRHYLASPETN-Y-TQNHQHLSMKTTFSRSSSYsiyeEKKSPLNTSSSLS 105
                   5556667889999**************99887775.56777477766555555.4.699***************844444566555555555 PP

>> DUF3328  Domain of unknown function (DUF3328)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.7   6.2e-06     0.016       5      81 ..      19      97 ..      14     121 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 6.2e-06
     DUF3328  5 krssawrrllllvlllllllllllilssllsssekkaakkkspsspspaldaieyelkqfk...lgskeapsiyrgepsp 81
                + ss +++l l++ll+l+++ l+l++  l++++ ++++++++++++sp+ +  + +++      + + +  siy+++ sp
  KHJ32159.1 19 HNSSTMINL-LITLLVLIFISLILTAVLLVARTIRRRRALSRHYLASPETNYTQNHQHLSMkttFSRSSSYSIYEEKKSP 97
                444555555.555555555555555555555555555666999*****99999999986555555555666667777666 PP

>> PHC2_SAM_assoc  Unstructured region on Polyhomeotic-like protein 1 and 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   3.5   2.2e-05     0.056      56     100 ..      70     114 ..      48     129 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.2e-05
  PHC2_SAM_assoc  56 sskllsqksqeeSsrcsDnSSyeEplsplSasssssrrrrgerel 100
                     + ++++ + +   sr+s  S yeE+ spl  sss s ++  e   
      KHJ32159.1  70 TQNHQHLSMKTTFSRSSSYSIYEEKKSPLNTSSSLSSESVPEIRI 114
                     5556666678888*********************99766555444 PP

>> Amnionless  Amnionless
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.7e-05     0.069     339     429 ..      13     110 ..       6     126 .. 0.61

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.7e-05
  Amnionless 339 aagapgesaglvlgivfglvlllllllillllllrrkgv.....lrlpqllksps....rreeveelkakldkgfdnprFdnvesnekpeeeslegesa 428
                 +a++++++ ++++ ++++l++l+++ lil+++ll  + +     l  +++l sp     ++++  ++k++ +++ ++ ++++  ++  ++++sl+ es 
  KHJ32159.1  13 QARNEQHNSSTMINLLITLLVLIFISLILTAVLLVARTIrrrraL-SRHYLASPEtnytQNHQHLSMKTTFSRSSSYSIYEEK-KSPLNTSSSLSSESV 109
                 455777888888888999999999999999999988888444422.4455555555544444444445555566666666665.444445455555554 PP

  Amnionless 429 v 429
                 +
  KHJ32159.1 110 P 110
                 4 PP

>> Tmemb_9  TMEM9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.1   0.00011      0.29      41     105 ..      15      79 ..       8     137 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00011
     Tmemb_9  41 kyesRntttikvvviivivvislLviYmlflllldpllnkrkkkasyqehtnee.detseslssas 105
                 + e+ n+ t+  ++i ++v+i++ +i   +ll++  + ++r+ + +y    + + ++++++ls ++
  KHJ32159.1  15 RNEQHNSSTMINLLITLLVLIFISLILTAVLLVARTIRRRRALSRHYLASPETNyTQNHQHLS-MK 79 
                 678899999999999999999999999999999999988887777776655444222223332.22 PP

>> DUF4083  Domain of unknown function (DUF4083)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   6.0    0.0012       3.2       4      34 ..      26      56 ..      23      63 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0012
     DUF4083  4 dliyliivivLilllvfsftlfiRrvvsrsa 34
                 l+++++v++ i l++ ++ l+ R +  r a
  KHJ32159.1 26 NLLITLLVLIFISLILTAVLLVARTIRRRRA 56
                689*********************9988866 PP

>> TMEM154  TMEM154 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   3.8     0.002       5.2      49      89 ..      14      54 ..       3      94 .. 0.69
   2 ?   -0.2   0.2      0.34   8.7e+02      23      42 ..      87     105 ..      60     123 .. 0.48

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.002
     TMEM154 49 lsnesdqlelvlmiiiPlvllillllvviiliqkkkrkrsK 89
                  ne+ + + ++ ++i l +li ++l+   +  + +  r++
  KHJ32159.1 14 ARNEQHNSSTMINLLITLLVLIFISLILTAVLLVARTIRRR 54
                56788888888888888888888776654333333333332 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.34
     TMEM154  23 datsaasteseslkqeeake 42 
                   ++    ++++l+++ +  
  KHJ32159.1  87 SYSIYEE-KKSPLNTSSSLS 105
                 2212211.233333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1143  (0.0637515); expected 358.6 (0.02)
Passed bias filter:                      734  (0.0409393); expected 358.6 (0.02)
Passed Vit filter:                        97  (0.00541023); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 1257.31
//
Query:       KHJ32160.1  [L=1053]
Description: putative gpi ethanolamine phosphate transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-11   43.9   1.5    3.4e-11   43.3   0.2    1.8  2  Phosphodiest   Type I phosphodiesterase / nucleotide pyrophos
    0.00058   19.3   0.1     0.0011   18.4   0.1    1.3  1  Metalloenzyme  Metalloenzyme superfamily
     0.0081   15.6   0.1      0.021   14.2   0.1    1.8  1  Sulfatase      Sulfatase


Domain annotation for each model (and alignments):
>> Phosphodiest  Type I phosphodiesterase / nucleotide pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.2   5.7e-15   3.4e-11     146     235 ..     246     326 ..     171     332 .. 0.79
   2 ?   -1.7   0.1      0.29   1.7e+03      90     113 ..     738     768 ..     703     779 .. 0.77

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 5.7e-15
                   H.HHHHHHHHHH..HHCHTHSHHHHHCTSSESEEEEEECCCHHHHHHH-TTSHHHHHHHHHHHHHHHHHHHHHHHTTGTTTEEEEEEES---E CS
  Phosphodiest 146 d.kvdkavlqtw..ldaafakvvlekelekpdlllvyleetDtvgHkfGpdspevedalrrvDkaigdLlealderglsaetniilvSDHGma 235
                     +vd+ v++++  l + ++k       e++d ++ ++ ++D++gH++Gpd+p+++ +l++  +++ d+++ +d++     t +++++DHGm 
    KHJ32160.1 246 LhTVDNGVTENLkpLLRRDKK-------ETWDIIIAHYLGVDHAGHRYGPDHPAMASKLQQMNNVLIDIVSTIDKD-----TLLVVMGDHGMD 326
                   234444455444443344444.......9***********************************************.....***********5 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.29
                   CTT.......S-HHHHHHHTHTTCEEEESET CS
  Phosphodiest  90 wqg.......epiwdtaakarglkaaalfwp 113
                   ++g        piw   ++  gl+ +a+fw+
    KHJ32160.1 738 YTGsrsyegfAPIWIGWVFRIGLTLNAIFWT 768
                   33345555589********99*********4 PP

>> Metalloenzyme  Metalloenzyme superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.1   1.8e-07    0.0011     128     188 ..     265     326 ..     224     335 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1.8e-07
                    .CC.-SEEEEEE-HHHHHHHTT..-HHHHHHHHHHHHHHHHHHHTTS-TTTEEEEEE-SSB-- CS
                    xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Metalloenzyme 128 lsgkfdlvvvniknaDmvGHtg..dleatiaaieaaDeavkeildaieqvdgilvvtADHgna 188
                    ++++ d+++ ++   D +GH+   d  a ++ ++++ + +  i+++i+++  +lvv++DHg +
     KHJ32160.1 265 KKETWDIIIAHYLGVDHAGHRYgpDHPAMASKLQQMNNVLIDIVSTIDKDT-LLVVMGDHGMD 326
                    578899**************963367789999***************9998.*********87 PP

>> Sulfatase  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.1   3.5e-06     0.021     209     309 .]     288     386 ..     201     386 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.5e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGEEEEEEESSSSCCCGHHTTSSSCTTCSSSHHHHBEEEEEEETTTSHC...........EEECSEEEG CS
   Sulfatase 209 qlleaylnsveyvDdligrvlaaLeenglldntlvvftSDhgasleesngplrggkganayeggtrvPllvwwpgekap...........rvseelvsh 296
                   + a +  + +++ ++ +++ ++     +++tl+v+++Dhg  l++     +gg++    ++ ++  l + + +e+               +e +v++
  KHJ32160.1 288 PDHPAMASKLQQMNNVLIDIVSTI-----DKDTLLVVMGDHGMDLKG----DHGGES----DDEVQSALWMFSRKEIFGrtdpkhfipplSAKERFVNQ 373
                 666777777888888888888888.....****************77....344444....4445555545444444444555566669********** PP

                 GGHHHHHHHHTTE CS
   Sulfatase 297 iDlfptildlagi 309
                 iD++pt++ l+gi
  KHJ32160.1 374 IDIVPTLALLLGI 386
                 *******999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1053 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       882  (0.049194); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.30s 00:00:01.06 Elapsed: 00:00:00.46
# Mc/sec: 6905.23
//
Query:       KHJ32161.1  [L=170]
Description: putative dnase1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.044   13.5   0.0      0.059   13.1   0.0    1.2  1  ApoM      ApoM domain
      0.071   12.8   0.1       0.12   12.0   0.1    1.3  1  LupA      Legionella ubiquitin-specific protease A domain


Domain annotation for each model (and alignments):
>> ApoM  ApoM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   6.5e-06     0.059      28      75 ..      48      98 ..      32     124 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 6.5e-06
        ApoM 28 rlstsgvdkkefpeqylgqwyfva..aaatptkeeletfdavdniv.fsva 75
                +l  + v +k+fp  + g+wy v+  aa +p+     tfd  d +  f+v+
  KHJ32161.1 48 KLMGNSVAQKNFPFGWSGNWYSVSegAADVPGMLGEVTFDGYDGATyFDVS 98
                6778899****************74345579999999****9987625555 PP

>> LupA  Legionella ubiquitin-specific protease A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   1.3e-05      0.12     125     176 ..     122     169 ..     103     170 .] 0.86

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.3e-05
                 GGHHHHHHHHHHHHHHHTT--GGGS-HHHHHHHHHHTTGGGHHHHHHHHHHH CS
        LupA 125 yscgdftcayshkkmkelgapkksyneelidtldnlgnednvlrlatreetr 176
                   c  f ca  ++k  +l +  ++y ++li     lgn++n lr   r+et+
  KHJ32161.1 122 SGCQSFPCANVYRKADDLQT-VSTYSKDLICL---LGNNQNNLRRGIRKETK 169
                 5799**************98.789*****975...699**********9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1287.03
//
Query:       KHJ32162.1  [L=260]
Description: putative glycoside hydrolase family 18 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.1e-09   37.6   0.0    2.6e-09   37.2   0.0    1.2  1  Glyco_hydro_18  Glycosyl hydrolases family 18


Domain annotation for each model (and alignments):
>> Glyco_hydro_18  Glycosyl hydrolases family 18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.0   1.5e-13   2.6e-09      61     228 ..       3     153 ..       1     230 [. 0.79

  Alignments for each domain:
  == domain 1  score: 37.2 bits;  conditional E-value: 1.5e-13
                     STT-EEEEEEEETTTTTHHHHHHTSHHHHHHHHHHHHHHHHHCT-SEEEEEES-TTTSTCHHHHHHHHHHHHHHHHHHHHHHTSTTCEEEEEEES CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18  61 npgvkvllsiGGwtdssgfslaastdasrkkfadsvvsllrkygfDGiDidweypggnpedkenytallkelrealdkakategkkllLsaavpa 155
                       g+kvl  +GG+++ ++++ + ++da+ + + + ++ ++++  fDG+D+d e         ++  +l+ +l++ ++       +++l+++a+ a
      KHJ32162.1   3 LSGIKVLGMLGGAAK-GTYARLDQDDANFEIYYKPLKGFIEEKEFDGLDLDVEEEM----SLSGIIRLIDRLKADFG-------EDFLITMAPVA 85 
                     579*********996.99999*9999***************************322....2778999*******555.......78******999 PP

                     SHHH.HHHH..........CHHHHHHHHT..SEEEEETTTSSSTTSSBE--SS-SSBTCSSHHHHHHHHHHTT--GGGEEEEEESE CS
                     xxxx.xxxx..........xxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18 156 sasd.lskg..........ydlpkiakyl..DyvnvmtYDfhgswdnvtghhaplydaslnvdeavkeylkagvpakklvlGvpfy 228
                      a                 ++l+ ++      + n ++Y     w +            ++  ++ ++ ++ g pa+k+++G+ + 
      KHJ32162.1  86 TALLsD--EpkynlsgfsyEALEVMKG-NqiAWYNTQFY---CGWGD------------ISNTDTFDQIIAHGYPANKITIGLVTN 153
                     887731..2345566777533333332.23689999999...67888............7778899999*************9665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1880.63
//
Query:       KHJ32163.1  [L=659]
Description: putative cupin domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-36  124.9   1.8    3.5e-36  124.9   1.8    4.3  4  Mif2_N    Kinetochore CENP-C fungal homologue, Mif2, N-termin
    8.4e-34  115.6   3.1      2e-33  114.5   1.0    2.4  2  CENP-C_C  Mif2/CENP-C like
    1.1e-06   28.3   0.0    1.9e-06   27.4   0.0    1.4  1  Cupin_2   Cupin domain


Domain annotation for each model (and alignments):
>> Mif2_N  Kinetochore CENP-C fungal homologue, Mif2, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.9   1.8   5.9e-40   3.5e-36       1     135 []      18     152 ..      18     152 .. 0.88
   2 ?   -3.3   6.4       2.3   1.3e+04      45     122 ..     190     264 ..     162     291 .. 0.69
   3 ?   -6.4  10.5         3   1.8e+04      40     105 ..     321     387 ..     305     420 .. 0.64
   4 ?    1.3   0.1     0.085   5.1e+02      80     108 ..     469     497 ..     440     525 .. 0.65

  Alignments for each domain:
  == domain 1  score: 124.9 bits;  conditional E-value: 5.9e-40
      Mif2_N   1 ysnvGkaGRkTGvtlkdtgvrDehGlepidglFSsPeksekengeeeeeeededesgeedmdleessgpepadllsgrres.srlplprarSPaktslk 98 
                 ++nvG++GRkTG+tl++ g+rDehGlep+d+lFSsPek   +  +  ++++d++ s eedm+l ess+p+p ++l++r++  sr p+p++rSP+kt+l+
  KHJ32163.1  18 IFNVGVKGRKTGLTLPELGERDEHGLEPMDHLFSSPEKP--NVMDLINKRNDATLSDEEDMELGESSTPGPIEALAERKRLiSRPPPPKSRSPIKTFLQ 114
                 69*************************************..55666677889999999********************9552666779*********** PP

      Mif2_N  99 sparrnsslaresqeerpsssPsraasq........ktvkrrldf 135
                 sparrn  ++       ++ssP r++++         +v+r+l+f
  KHJ32163.1 115 SPARRNAVMG-------STSSPVRGSVVesksasrpGSVQRKLEF 152
                 **********.......7888888877677677777788888876 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.3
      Mif2_N  45 eeeeeeededesgeedmdleessgpepadllsgrressrlplprarSPaktslksparrnsslaresqeerpsssPsr 122
                 +++++ +++d+++ ed++  e + ++  ++ ++++++s+    + +S + t  +  + r ++++ +++++r++  P++
  KHJ32163.1 190 NSTSATKSDDDEEIEDISFVERESIDHIEVAQHNKNESEGL--SDESDKITEDEDQPIRANKMD-KETTSRKPPRPKE 264
                 34444455555555999998888888888888887444433..578888899999999999999.4555555556665 PP

  == domain 3  score: -6.4 bits;  conditional E-value: 3
      Mif2_N  40 ekengeeeeeeededesgeedmdleessgpepadllsgrressrlplprarSPak.tslksparrns 105
                 e+++  ++++++++de ++++ ++e+s+ +  +++ + ++++ +l  ++++S    +sl+    r +
  KHJ32163.1 321 EENRRLHKRSRNSSDEISSSEGEVEKSNVQTTKTMKRLKKNEYKLSESKSTSAQLaSSLSQGDSRPK 387
                 3444555666667777777999999999999999988888888888888877664233333333333 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.085
      Mif2_N  80 essrlplprarSPaktslksparrnssla 108
                  ++++  p ++S +kt+ +  ++r+++  
  KHJ32163.1 469 VRAEITEPVKKSRIKTHSSKVKKRKRAKV 497
                 45666678888888888877666666544 PP

>> CENP-C_C  Mif2/CENP-C like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.15   8.9e+02      20      39 ..       2      21 ..       1      26 [. 0.85
   2 !  114.5   1.0   3.3e-37     2e-33       1      85 []     564     648 ..     564     648 .. 0.99

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.15
                -TCCCEEEEE--SEEEEEEE CS
    CENP-C_C 20 ppgaeKkkknskkatlvFyV 39
                 p+++K ++++k++ ++F V
  KHJ32163.1  2 APEDIKSNRKVKDNKYIFNV 21
                68899*************98 PP

  == domain 2  score: 114.5 bits;  conditional E-value: 3.3e-37
                 -EEEEE--TTS-EEEEEEE-TCCCEEEEE--SEEEEEEEEESEEEEEETTEEEEEETT-EEEE-TT-EEEEEE-SSS-EEEEEEE CS
    CENP-C_C   1 fklaklldkkflasGilkLppgaeKkkknskkatlvFyViqGrvevtvsktsfvigkgsvFqvPagneysieNklnkeaklfFvq 85 
                 f++ak+l+ +f+++G+++Lppg eKk+kns+k++++F+V++G+v+vtv+++ f+i+kg+++qvP+gn y i+N+++k a++fF q
  KHJ32163.1 564 FRFAKTLTLPFFGAGMVDLPPGSEKKQKNSRKMQMAFFVFYGKVQVTVNDNVFRISKGGMWQVPRGNFYGIQNDYDKPARIFFSQ 648
                 8**********************************************************************************98 PP

>> Cupin_2  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   3.3e-10   1.9e-06       2      68 ..     579     645 ..     578     647 .. 0.89

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 3.3e-10
                 EEEEETTEEEEEECSSSEEEEEEEEESEEEEEECTEEEEEETTEEEEE-TT-EEEEEE-SSS-EEEE CS
     Cupin_2   2 lvelppGesapshrHpgedeffyVleGegeltvdgeeveleaGdsvyfpagtpHrfrNtgdeparll 68 
                 +v lppG + ++ + +  +  f+V  G++ +tv+++++++++G ++ +p+g   ++ N+ d+par++
  KHJ32163.1 579 MVDLPPGSEKKQKNSRKMQMAFFVFYGKVQVTVNDNVFRISKGGMWQVPRGNFYGIQNDYDKPARIF 645
                 799*****66666655555*********************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (659 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1745  (0.0973284); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.30s 00:00:01.03 Elapsed: 00:00:00.46
# Mc/sec: 4332.53
//
Query:       KHJ32164.1  [L=322]
Description: putative collagen alpha-5 chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        5.5    7.1   9.2       0.93    9.5   0.3    2.8  2  DUF3724   Protein of unknown function (DUF3724)


Domain annotation for each model (and alignments):
>> DUF3724  Protein of unknown function (DUF3724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.3   5.2e-05      0.93       7      22 ..     127     142 ..     124     143 .. 0.92
   2 ?   -0.1   3.2     0.059   1.1e+03      11      19 ..     167     175 ..     166     177 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 5.2e-05
     DUF3724   7 VeDYsrYtqatqntay 22 
                 V+++ +Yt++ ++t++
  KHJ32164.1 127 VQNSKTYTVTEATTLT 142
                 9************987 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.059
     DUF3724  11 srYtqatqn 19 
                 ++Y++++++
  KHJ32164.1 167 TTYYTGSTT 175
                 8*****996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       856  (0.0477439); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2433.91
//
Query:       KHJ32165.1  [L=312]
Description: putative eukaryotic translation initiation factor 2 subunit alpha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-36  125.2   0.0    2.7e-36  124.2   0.0    1.5  1  EIF_2_alpha  Eukaryotic translation initiation factor 2 alpha
    1.1e-13   51.3   0.6    2.7e-13   50.1   0.6    1.7  1  S1           S1 RNA binding domain


Domain annotation for each model (and alignments):
>> EIF_2_alpha  Eukaryotic translation initiation factor 2 alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.2   0.0     3e-40   2.7e-36       1     116 []     126     237 ..     126     237 .. 0.94

  Alignments for each domain:
  == domain 1  score: 124.2 bits;  conditional E-value: 3e-40
                  HHHCTHHHHTTTTS-HHHHHHHHHSTTHHHHHTTS-TT.THHHHHHCTHHHHHHT-EEEEEEEEEEE-STTHHHHHHHHHHHHST.S..TTSSSEEEE CS
  EIF_2_alpha   1 lyeevgwklyekyghaydaFklaitdeevldkleipee.veeaLveiikkklkpqkvkiradieltcftkdGveaIkeaLkageeasneeeveeeeev 97 
                  lye++gw+l++kygha daFkl+it++++++++++p++ v e+L+++i k+l+pq+ k+rad+e+tcf+++G++a+k+aL+++e+ ++ +     ++v
   KHJ32165.1 126 LYERIGWPLNKKYGHAVDAFKLSITNPDIWQDVSFPNDvVSEELKSYIGKRLTPQPTKVRADVEVTCFGYEGIDAVKTALRTAEARNTPD-----NQV 218
                  7**********************************96626899**************************************888866555.....9** PP

                  EEEESSSSEEEEEEEES.. CS
  EIF_2_alpha  98 kikliapPeYvltvetldk 116
                  k+kl++pP+Yvlt+ +ldk
   KHJ32165.1 219 KVKLVSPPLYVLTSMCLDK 237
                  ****************997 PP

>> S1  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.6     3e-17   2.7e-13       2      75 .]      14      88 ..      13      88 .. 0.97

  Alignments for each domain:
  == domain 1  score: 50.1 bits;  conditional E-value: 3e-17
                STTTCEEEEEEEEEETTEEEEEET..TTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEEC CS
          S1  2 pekgevveGeVtsvtkgGafVelg..ngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsik 75
                pe++  v+ +V+++ ++Ga+V l+   +++g++ +selsr+ r++++ + +++G    v+vl+vdk++++i+ls++
  KHJ32165.1 14 PEIDSFVMVNVKQIAEMGAYVKLLeyDNIDGMILLSELSRR-RIRSIQKLIRIGRNEVVVVLRVDKEKGYIDLSKR 88
                789999******************999**************.********************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       759  (0.0423336); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2416.73
//
Query:       KHJ32166.1  [L=1251]
Description: putative duf221 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-82  277.1  23.7    1.4e-82  277.1  23.7    1.8  2  RSN1_7TM  Calcium-dependent channel, 7TM region, putative pho
    1.3e-44  151.7   1.4    1.3e-44  151.7   1.4    2.9  3  RSN1_TM   Late exocytosis, associated with Golgi transport
    1.7e-27   96.8   4.7    2.4e-15   57.2   0.2    2.4  2  PHM7_cyt  Cytosolic domain of 10TM putative phosphate transpo
      1e-15   57.6   0.0    2.8e-15   56.2   0.0    1.7  1  PHM7_ext  Extracellular tail, of 10TM putative phosphate tran
  ------ inclusion threshold ------
       0.12   12.4   0.2       0.58   10.2   0.1    2.2  2  R3H       R3H domain


Domain annotation for each model (and alignments):
>> RSN1_7TM  Calcium-dependent channel, 7TM region, putative phosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.6       1.9   6.7e+03       2      22 ..     191     211 ..     190     214 .. 0.79
   2 !  277.1  23.7   3.9e-86   1.4e-82       1     274 []     714     986 ..     714     986 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 1.9
    RSN1_7TM   2 klivtlllvlliifwiipvaf 22 
                 +++++l+l++l+i+w+  v f
  KHJ32166.1 191 RYWAHLILAILVIIWVCGVFF 211
                 678889999999999877765 PP

  == domain 2  score: 277.1 bits;  conditional E-value: 3.9e-86
    RSN1_7TM   1 rklivtlllvlliifwiipvafvgllsnletltkvlpflkkilelskkllsvvtgllPtlllslllallpiilrllsklqGalsrselelsvvskyfaF 99 
                 r++i+  ++v+++i+w+ pva +++l++++tl++ +pfl+++ +++++++++v+g+lP+++l +ll+l+piil++l+ lqGa++ +e++ s++  yf+F
  KHJ32166.1 714 RTTIISGIVVAMVILWASPVAWTASLAQVSTLASRFPFLRWLEDIPNNIVQAVSGVLPAVILGVLLLLVPIILEYLAFLQGAQTGTEQQSSLQIYYFVF 812
                 5679999******************************************************************************************** PP

    RSN1_7TM 100 lvvnvFlvftlagtalslleeiidnptsipkllaeslpkasnFfityillqglagaaleLlqlvklilflikrkflsktprdlaerytkppsfdygtey 198
                 l+v+vFlv++++g+ +++l + ++  t+ip++la++lpka+n+f++y++lq+l+ +++ Llq+++l+ ++i  +++++t+rd+++r+t++ps+++gt +
  KHJ32166.1 813 LFVQVFLVVSISGGTVAALGTATN-ITTIPDTLATQLPKAANYFFSYMILQALSSSSGGLLQVPTLLRWYIWPRLVDSTARDKWTRNTTLPSITWGTLF 910
                 ********************9999.************************************************************************** PP

    RSN1_7TM 199 pkvllifvialiYsviaPlilpfaliyfllgylvykyqllyvydtkyesgGklwpralnrllvglvlfqllliglf 274
                 p+++++++ialiYsviaP+i++fa+i+f+l +++++y++lyv++   ++gG l+pra+n++++gl++++l+liglf
  KHJ32166.1 911 PVYTNFACIALIYSVIAPVIIIFAIITFSLLWIAQRYNMLYVFRFHLDTGGLLYPRAINQTFTGLYVMELCLIGLF 986
                 **************************************************************************98 PP

>> RSN1_TM  Late exocytosis, associated with Golgi transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.7   1.4   3.8e-48   1.3e-44       1     154 [.      41     211 ..      41     213 .. 0.97
   2 ?   -3.8   0.1       2.7   9.8e+03      91     111 ..     721     741 ..     715     748 .. 0.63
   3 ?    0.8   0.4       0.1   3.6e+02       7      39 ..     925     959 ..     920    1042 .. 0.73

  Alignments for each domain:
  == domain 1  score: 151.7 bits;  conditional E-value: 3.8e-48
     RSN1_TM   1 alltslvinlvlalvflllFlilRkknkrvYaprtylkgeeertpplpqkglfgWipallkisdeeilekaGLDayvflrflkmlikiflvlavlaliv 99 
                 a++++l+i+lv+++v+ll+Fl+lR+k++r+++p+tyl +e+ert+p+p ++++gW+ al+k++d+ei++k+GLDay+f r+lk+l+ +f++lav+ +++
  KHJ32166.1  41 AFFSALTISLVVFAVQLLAFLLLRNKLARIFKPKTYLVPENERTDPPP-RSPWGWLFALFKFKDQEIIRKCGLDAYFFSRYLKTLLVVFIPLAVILIPI 138
                 5899*******************************************9.************************************************** PP

     RSN1_TM 100 LlPvnatggegedskesk.................sgldklsisnvs.egsnrlwahvvvayiftglvlylly 154
                 LlP+n+ gg+g+  k++                  +gld+l+++nv+ ++++r+wah+++a++++++v+ +++
  KHJ32166.1 139 LLPLNYIGGRGSYYKQKLvigihngiinetlaaniTGLDTLAWGNVRpSQTDRYWAHLILAILVIIWVCGVFF 211
                 ***********98877669***************************989999*****************9876 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2.7
     RSN1_TM  91 vlavlalivLlPvnatggege 111
                 +++ ++++  +Pv +t +  +
  KHJ32166.1 721 IVVAMVILWASPVAWTASLAQ 741
                 444455555788888877655 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.1
     RSN1_TM   7 vinlvlalvflllFlilRkk..nkrvYaprtylkg 39 
                 vi+ v+ +++++ F++l     ++ +Y  r +l++
  KHJ32166.1 925 VIAPVIIIFAIITFSLLWIAqrYNMLYVFRFHLDT 959
                 56667777888888888655448999999988875 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.9   7.3e-14   2.6e-10       2     120 ..     237     344 ..     236     351 .. 0.84
   2 !   57.2   0.2   6.8e-19   2.4e-15      60     176 .]     593     703 ..     582     703 .. 0.76

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 7.3e-14
    PHM7_cyt   2 rTvlvtgiPkelrseeklkeffeelypgkvvesvqivrdvkkldklveerekavrkleaalskykkngkklpkkrpthklgflglkligkkvdaidyyr 100
                  Tvlv+ iP+++++ee+l ++fe ++pg v ++v+i+r+++kl k ++er+ +   le  ++++++ +kk     ++ +  +      +kk   i  y+
  KHJ32166.1 237 TTVLVSAIPRKWLTEEALTRMFE-VFPGGV-RNVWINRNYDKLLKKIQERQYIFGLLESSQTQLIRLAKKA----QMVQAEKD-----EKKKARISTYN 324
                 6*********************7.78**98.*********************************9998764....45554433.....47777788888 PP

    PHM7_cyt 101 ekleeldeeieeerekvkkk 120
                  k  + d++ +  ++ v+++
  KHJ32166.1 325 VKMTRKDKQEKLRQADVQAE 344
                 88888888777777777655 PP

  == domain 2  score: 57.2 bits;  conditional E-value: 6.8e-19
    PHM7_cyt  60 aalskykkngkklpkkrpthklgfl...glkligkkvdaidyyrekleeldeeieeerekvkkkp.lgaaFvtfesersaaavakqakcaaqiqqssnp 154
                 aa++ky+k +++  +  p   +  +   g+ +i kkvd+i ++r++l +l+ eie  +++ +k p +++aF++f+ +  aa++a    c  q  + + p
  KHJ32166.1 593 AAWQKYLKAKDRPTHLVPLFSWTPRwlpGIPIINKKVDTIYWCRKELARLNLEIEIDQKHPEKFPlMNSAFIQFNHQ-VAAHMA----C--QSVSYHVP 684
                 67999999987544444444444224457889***************************87665569********76.566664....5..55566777 PP

    PHM7_cyt 155 tl.kpkkwtvelAPePrDviWeN 176
                 ++ +p+ ++v+    P+Dv+W+N
  KHJ32166.1 685 KQmAPRIVEVS----PKDVLWDN 703
                 77788889998....*******9 PP

>> PHM7_ext  Extracellular tail, of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.2   0.0   7.9e-19   2.8e-15      17      93 .]    1158    1242 ..    1146    1242 .. 0.85

  Alignments for each domain:
  == domain 1  score: 56.2 bits;  conditional E-value: 7.9e-19
    PHM7_ext   17 lpeeynee....eeeyeeelekkaYlhPavtskepllWiprDpagvSkqeieetekvi..gi..sdegaeldekgkvewteaPpd 93  
                  l   yn++    ++e ++ l+++a+ h a+++++p++WiprD++gvS++ei++t++ +   i  s+ ga ld k +v++ ++Ppd
  KHJ32166.1 1158 LYGGYNDDiedlTPEERDVLVRRAFQHSALRARRPTIWIPRDDIGVSDDEIRRTREFAgnSIwiSNVGAALDGKARVVYGRNPPD 1242
                  55566666666788999999***********************************988663355********************7 PP

>> R3H  R3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.75   2.7e+03       2      34 ..     269     299 ..     268     305 .. 0.79
   2 ?   10.2   0.1   0.00016      0.58      16      48 ..     649     681 ..     634     686 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.75
                 HHHHHHHHHHHHHH-S--EEE-----SHHHHHH CS
         R3H   2 fllrvekklaefvkdtgrslefppmssyeRrii 34 
                 ++ r ++kl +++  ++r++ f  + s + ++i
  KHJ32166.1 269 WINRNYDKLLKKI--QERQYIFGLLESSQTQLI 299
                 6667788999999..7799*9998877776666 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00016
                 -S--EEE-----SHHHHHHHHHHHHSSEEEEEE CS
         R3H  16 dtgrslefppmssyeRriiHelaeaygleseSv 48 
                 d++ + +fp m+s   ++ H++a+++ ++s+S+
  KHJ32166.1 649 DQKHPEKFPLMNSAFIQFNHQVAAHMACQSVSY 681
                 5678889************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1392  (0.0776396); expected 358.6 (0.02)
Passed bias filter:                      609  (0.0339673); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.89u 0.29s 00:00:01.18 Elapsed: 00:00:00.47
# Mc/sec: 7927.23
//
Query:       KHJ32167.1  [L=114]
Description: hypothetical protein EV44_g3707 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      219  (0.0122148); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.29s 00:00:00.67 Elapsed: 00:00:00.44
# Mc/sec: 785.74
//
Query:       KHJ32168.1  [L=221]
Description: hypothetical protein EV44_g3831 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       966  (0.0538792); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1715.22
//
Query:       KHJ32169.1  [L=308]
Description: hypothetical protein EV44_g3572 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      0.004   16.7   0.2        2.9    7.5   0.0    2.4  2  DisA_N     DisA bacterial checkpoint controller nucleotide-bi
  ------ inclusion threshold ------
      0.052   12.7   0.0      0.096   11.9   0.0    1.4  1  DUF3822    Protein of unknown function (DUF3822)
      0.074   11.6   0.1      0.086   11.4   0.1    1.2  1  T6SS_TssF  Type VI secretion system, TssF


Domain annotation for each model (and alignments):
>> DisA_N  DisA bacterial checkpoint controller nucleotide-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0   0.00082       4.9      50      70 ..      67      88 ..      54     107 .. 0.80
   2 !    7.5   0.0   0.00049       2.9       9      87 ..     177     262 ..     171     267 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.00082
                TSTTCSSEEEE.ETTEEEEEEE CS
      DisA_N 50 ksplhDGAvii.rdgrivaagv 70
                 + +hDGA+ i ++++i++++ 
  KHJ32169.1 67 ITLQHDGALSIsQHKQIMKIKL 88
                5789*******88999998875 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.00049
                 HHT--EEEEEESSSCCCTTCCTSEEEEEE--HHHHHHHTSTTSTTCSSEEEE.E.TTEEEEEEEEE--.TT-TTS....ST-SHHH CS
      DisA_N   9 kkkiGaliviereeelkeiietgvkldaevskellkeifekksplhDGAvii.r.dgrivaagviLpl.senkel....kelGtRH 87 
                  ++iG +i + ++++  +i++       +v++++l + ++  s   D A  i +  ++i++ +v L++  ++k+l     +lGt H
  KHJ32169.1 177 TSQIGYVIALADAQNRANILHWKSVKCRRVTRSVLASELYAMSLGFDVAATIrSsLNQILSSNVSLTIcVDSKSLydclVKLGTTH 262
                 5789***********999998666667788999999988*************64699*********99766544432223777766 PP

>> DUF3822  Protein of unknown function (DUF3822)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.6e-05     0.096      10      68 ..     137     198 ..     129     208 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.6e-05
     DUF3822  10 eqykLsirlsadglsfsvldpeskrvllleeysfdeseesllan......lkqlfkehellsqpy 68 
                  +  Ls +l+a gl+f+ ld++s r++++++ sf  ++ +l+++      l ++ ++ ++l+  +
  KHJ32169.1 137 LKRCLSWQLKAGGLRFVQLDQKSLRLITFTDSSFA-NNDDLTSQigyviaLADAQNRANILH--W 198
                 4567*******************************.77777777343333666666666665..4 PP

>> T6SS_TssF  Type VI secretion system, TssF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   1.4e-05     0.086     446     553 ..     111     231 ..      35     251 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.4e-05
   T6SS_TssF 446 ltleesa.pvervrnlraptaprapplegelaWrl.........ishlslnylsltdg...gaeaLrellrlyafrddaatrrqidgivsvslrpvtrr 531
                 ++ +++  + + +  +++pt + a  l++ l+W+l         + + sl ++++td+   +++ L +         da++r +i   +sv++r+vtr 
  KHJ32169.1 111 VSQPQASfNLSHAAQITQPTNKDAETLKRCLSWQLkagglrfvqLDQKSLRLITFTDSsfaNNDDLTSQIGYVIALADAQNRANILHWKSVKCRRVTRS 209
                 44444445788889999999999999997777766333333222666777777777775554455544444444499********************** PP

   T6SS_TssF 532 vpgkgglvfarGveitltldes 553
                 v  ++ +++  G+++  t+++s
  KHJ32169.1 210 VLASELYAMSLGFDVAATIRSS 231
                 *999*************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2461.41
//
Query:       KHJ32170.1  [L=307]
Description: hypothetical protein EV44_g3391 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       765  (0.0426683); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 2476.22
//
Query:       KHJ32171.1  [L=650]
Description: hypothetical protein EV44_g3834 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0024   18.1   0.0     0.0062   16.7   0.0    1.7  1  rve              Integrase core domain
     0.0039   17.0   0.1     0.0039   17.0   0.1    2.0  2  gag_pre-integrs  GAG-pre-integrase domain
  ------ inclusion threshold ------
      0.067   12.6   0.0       0.12   11.8   0.0    1.3  1  AICARFT_IMPCHas  AICARFT/IMPCHase bienzyme
       0.13   10.4   0.0        0.2    9.8   0.0    1.2  1  HSP70            Hsp70 protein
       0.27   11.4   1.7        2.9    8.1   0.1    3.1  2  Integrase_H2C2   Integrase zinc binding domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   1.7e-06    0.0062       6     117 ..     345     449 ..     341     450 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 1.7e-06
         rve   6 elwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlaller.avarfggvepervlsDngseytskafrefladlgirvsftrpgrpq 103
                 + + +Dv +++   g+    +l+vvd  + +  a  l++  + s++ ++l++  ++ + g  pe+++   g+++ s +fr+ +  lgi+++  ++  +q
  KHJ32171.1 345 QSLVIDVLYID---GD---PVLHVVDESTSFQAAKWLPNL-SVSHTWDMLRMyWIDIYTGP-PETLIHYTGTAFDSAEFRQSATALGIEIKQDPVEAAQ 435
                 66777777777...33...678889999999999999999.66666666664145556665.99999999***************************** PP

         rve 104 dnGkvErfhrtlkd 117
                 + G vEr h  l++
  KHJ32171.1 436 SVGTVERYHAPLRR 449
                 *********98886 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.3       2.3   8.1e+03      54      64 ..       6      16 ..       3      16 .. 0.74
   2 !   17.0   0.1   1.1e-06    0.0039      24      63 ..     280     324 ..     269     325 .. 0.70

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 2.3
  gag_pre-integrs 54 sksevCeaCql 64
                     s  ++C +Cq+
       KHJ32171.1  6 SRIKHCFVCQK 16
                     56789999995 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 1.1e-06
  gag_pre-integrs  24 inlWHrRLGHpsfsrl.kkLfkkgllpglki...sk.sevCeaCq 63 
                      ++  HrRLGHps++rl ++L + g+ ++ +    +k  +vCe C+
       KHJ32171.1 280 LRQLHRRLGHPSVNRLiRTLERAGHGDPSHRnilDKiTRVCEFCE 324
                      5678*********98625566677766654322222567999996 PP

>> AICARFT_IMPCHas  AICARFT/IMPCHase bienzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.2e-05      0.12      16      56 ..     450     490 ..     446     537 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.2e-05
                      GHHHHHHHHHCT.B-HHHHHHHHHHHHHHHHHHHHHHHHHH CS
  AICARFT_IMPCHas  16 dYeevleelkkgevsletrkklaakaFahtaaYDaaiaeyl 56 
                       Y+ +++elk ++v ++ r +la+ka + +a YD  + + l
       KHJ32171.1 450 AYKIITDELKGQNVPKNIRLQLAVKAVNDSAGYDGIVPTLL 490
                      7999*******************************999888 PP

>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   5.7e-05       0.2     221     306 ..      41     127 ..      30     159 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 5.7e-05
                 XSHHHHHHHHHHHHHHHHHHHHSXXGGGSHH.HHHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTTEEEEEEEEHHHHHHHHHHHH CS
       HSP70 221 lGGedfDealvehlveefkkkegidlskdkk.alqrlkeaaekaKkeLSsskqteinleietvdedgkdlseklsRakfeelvedll 306
                  G + fD+ l+e+  +e  ++e+i+++++ k  ++ l  + +k  ++ Sss+   ++++++t ++++++++e ++R+ ++ +++d+ 
  KHJ32171.1  41 TGAKVFDSYLLEYEGTENINEEEIQCHENIKnDIETLILDIDKFNINESSSETFYTSIDFITSHQAQNHFRELMNRSTYHCITHDIP 127
                 58889********************99996526999**************9999***********99************99999875 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.3      0.17     6e+02      46      54 ..       8      16 ..       5      18 .. 0.87
   2 ?    8.1   0.1   0.00081       2.9      10      32 ..     280     302 ..     275     329 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.17
  Integrase_H2C2 46 vksCetCqr 54
                    +k+C +Cq+
      KHJ32171.1  8 IKHCFVCQK 16
                    89******8 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00081
  Integrase_H2C2  10 lkeaHdsagHlGiektlerlrrr 32 
                     l+++H  +gH+++++ +++l r 
      KHJ32171.1 280 LRQLHRRLGHPSVNRLIRTLERA 302
                     799**************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (650 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       743  (0.0414412); expected 358.6 (0.02)
Passed bias filter:                      582  (0.0324614); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 4568.02
//
Query:       KHJ32172.1  [L=811]
Description: putative homoaconitase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   5.6e-111  371.8   0.1   4.7e-110  368.7   0.1    2.0  1  Aconitase    Aconitase family (aconitate hydratase)
    5.9e-23   81.6   0.0    1.1e-22   80.8   0.0    1.4  1  Aconitase_C  Aconitase C-terminal domain


Domain annotation for each model (and alignments):
>> Aconitase  Aconitase family (aconitate hydratase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  368.7   0.1  5.2e-114  4.7e-110      15     461 .]     115     530 ..      95     530 .. 0.89

  Alignments for each domain:
  == domain 1  score: 368.7 bits;  conditional E-value: 5.2e-114
   Aconitase  15 ayv...pdrvllqdvtgvqalvdlaaareavrrlggtlatidhlvpvdlvidhsvgaeealeknledefernkeryefLksaakafgirvvppgqGIvH 110
                 +yv   p++++++d +++ al+ ++  +++++++++ ++ +dh+v+++     s               + n ++y++++++a+++gi+++p+g GI H
  KHJ32172.1 115 DYVtlsPQHCMTHDNSWPVALKFMSIGATKIHNPKQIVMALDHDVQNK-----S---------------DANLKKYKQIEDFARQHGIDFYPAGFGIGH 193
                 455567*****************************************9.....1...............22335699********************** PP

   Aconitase 111 qvnlEyglalpgktvvgtDSHTtmigglGvlaiGvGgieaeavllgqplelkipkvvgvkltGklkegvtakDlvlavigklrkkgvvgkvvEffG..e 207
                 q+++E+g+a+pg++ v++DSH++m+gg+G+l++ + +++a++++++  ++++ip v +v +tG+l+ gvt kD+++a++g +++++v ++++Ef+G  +
  KHJ32172.1 194 QIMVEEGYAWPGNMTVASDSHSNMYGGVGCLGTAIVRTDAASIWATGRTWWQIPPVARVVFTGELPRGVTGKDIIIALCGLFNQDEVLNHAIEFTGskT 292
                 ************************************************************************************************655 PP

   Aconitase 208 gvesLsledraTiaNMaaEvGAttglfpvdektleYLkatgreeaavlveaydk.....aqalf..elaadedaeydkvleldlstlepsvagpkrPqd 299
                 +++s+++++r+TiaNM++E+GA tglfpvd+ +  +Lk +  ++a    ++ ++      ++l   +l ad++a+y+k+l ldlstl p v+gp++++ 
  KHJ32172.1 293 TMQSIPIDHRLTIANMTTEWGALTGLFPVDSVLEFWLKSKVTAAAVL-NQQNHRlshvrIDELAkkKLLADPGATYAKTLYLDLSTLYPFVSGPNSVKI 390
                 789999********************************555544432.22222222233333443358899**************************** PP

   Aconitase 300 avplselvkkefkeelekeaaekaleyklkegtklkdgkvdiaaigSCTNssnedvraaagllakavekg..lkvkpgvktsvaPGSevvkayleaeGl 396
                 a+pl+e                             k++++d+a++ SCTNs+ +d+ aaa++++ a ++g   ++++ vk++va++S+  ++ +e++G 
  KHJ32172.1 391 ATPLREIE--------------------------AKNIEIDKAYLISCTNSRASDLAAAAKVFKDAFDAGepAEISSRVKFYVAAASKSEQKVAEEAGD 463
                 ****3333..........................35677*****************************995569999********************** PP

   Aconitase 397 leiLekaGfevvgagCstCig.nsdrleegeaivsssNRNFegRqg.pntrayLaSPelvvaaAlaG 461
                 ++iL kaG+  + agC++Cig  ++ le+ge+++sssNRNF+gR+g p+++ayLaSPe+v+a+Al G
  KHJ32172.1 464 WQILLKAGAISLPAGCGPCIGlGTGLLEPGEVGISSSNRNFKGRMGsPDAKAYLASPEVVAASALRG 530
                 *********************************************87******************98 PP

>> Aconitase_C  Aconitase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.8   0.0   1.2e-26   1.1e-22      18     129 ..     598     715 ..     587     717 .. 0.92

  Alignments for each domain:
  == domain 1  score: 80.8 bits;  conditional E-value: 1.2e-26
                  TGGGCCGHCCHHHCCCGGTTTCCCCTTTSBBSEEEETTTTEEE.......EHHHHHHHHHHTT--EEEE--SSBTBS---THHHHHHHHTTEEEEEES CS
  Aconitase_C  18 nvdtdlkipkqfegtianiglgnelveekrankttdlddgeke.......dvvdaaerykkegaklvviagknfGeGSSRehAAkalrllGikaviae 108
                    ++  ++p ++eg+i  ++++n+++++++++k+t+ld+   e       +++d+++     + +++v++ +nfG+GSSRe+AA+a +++ i +v+ +
   KHJ32172.1 598 LTEILPGFPEKVEGEIIFCDADNINTDGIYPGKYTYLDNISSEkmaqvcmENYDTEFGSIAREGDILVSG-FNFGCGSSREQAATAILAKKIPLVVCG 694
                  56777899*****************************9877667799999*********99*********.*************************** PP

                  -B-HHHHHHHHHTT-EEEEES CS
  Aconitase_C 109 SFerIfennliknglLplefk 129
                  SF+ If +n+i+n+l+ +e +
   KHJ32172.1 695 SFGSIFARNSINNALMGVECP 715
                  ****************99877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (811 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       541  (0.0301746); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 5490.28
//
Query:       KHJ32173.1  [L=1256]
Description: putative arm repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00025   21.1  11.1     0.0019   18.3   2.3    4.3  3  Xpo1      Exportin 1-like protein
    0.00028   20.8   0.0     0.0013   18.6   0.0    2.3  1  IBN_N     Importin-beta N-terminal domain


Domain annotation for each model (and alignments):
>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   2.3   2.1e-07    0.0019       2     141 ..     127     294 ..     126     304 .. 0.80
   2 ?   -3.0   0.1      0.76   6.8e+03      76     111 ..     602     642 ..     599     643 .. 0.72
   3 !    5.9   0.1    0.0014        13      38      96 ..    1074    1132 ..    1048    1162 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 2.1e-07
                 HHHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCT..HHHHHHHHHHHHHHHHHHHTSHTTTSCHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHCC CS
        Xpo1   2 kflrnklaealaelflqeypnnWpsffddllsllsss.psglelllriLkvlpeEiadfsrskleqerrndlkdllrsn.vqkilelllqileqsqskk 98 
                  +lrnk+a++ +e +++ + ++W+++ ++l+   ++   ++ e++l i+  l+e+++  +++ ++  r   l+++ ++  ++ i+++  +  ++++++ 
  KHJ32173.1 127 VYLRNKVAQLWVEVAKRSWCSSWKDMNEQLILFWNMPvTEQKEFVLYIIENLSEDVF-GKEDIATIMRGDTLQKACTEIfAPSIANS--EAFSNQENNC 222
                 689****************************88888559999**************9.58888888888888888888877777775..3333333333 PP

                 .............................HHHHHHHHHHHHHHHHTTTS-HHHHHTSCHHHHHHHHCCSCCC CS
        Xpo1  99 .............................qsselveavLkclsswvswidiglivnnpllnllfqlLsdpel 141
                                              ++ + +  +L +++s   wi    i n++++n ++++L+ +++
  KHJ32173.1 223 pissgdegwlirigkffdylldnrlyeasENMKCIVRILSVYKSVSTWIFPAAISNSSCVNKMIKALTVSKI 294
                 578899999999999999999999998887778888888888888889999999999999999999854443 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.76
                 HHHHHHHHHHHHHHHHHHHHHCC.....HHHHHHHHHHHHH CS
        Xpo1  76 lrsnvqkilelllqileqsqskk.....qsselveavLkcl 111
                 l++n + +l++l+qil + + ++     + + + e+ L+cl
  KHJ32173.1 602 LDQNNSFMLKVLEQILTNRVLESpehlkYTEAVKEMQLDCL 642
                 66667778888888888877766777777777777777776 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0014
                  .HHHHHHHHHHHHHHHHHHHTSHTTTSCHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHH CS
        Xpo1   38 spsglelllriLkvlpeEiadfsrskleqerrndlkdllrsn.vqkilelllqileqsqs 96  
                  +   + + lri++++  E ++ +++kl +++++++   +r+  +  +l+ +++ l++   
  KHJ32173.1 1074 DTRSCGVALRIFRSIIPEFSQ-KKDKLNEKENTEILASIREFiCHNVLMACISSLNEPYF 1132
                  47789999***********98.99*****************99999*9999999877554 PP

>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   1.4e-07    0.0013       3      55 ..      55     120 ..      53     141 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 1.4e-07
                 HHHHHHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHC.............G CS
       IBN_N   3 kqLkqlekqpgflsallqilanseselevRqlAalyLknlitkhWsdeeekq.............s 55 
                   L q + ++++    + ++++ + ++ vR+ A+++L+  ++++W++ +e q             s
  KHJ32173.1  55 AFLDQIKCHNQAPGHGFMLASDATQQPTVRHYALSLLEYAVKYKWREYSEVQettlrgwvihlarS 120
                 57899999999999999*****99999*******************33333344445555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.80u 0.28s 00:00:01.08 Elapsed: 00:00:00.45
# Mc/sec: 8398.55
//
Query:       KHJ32174.1  [L=393]
Description: putative sgt1 and cs domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-28   97.2   0.6    1.1e-27   95.9   0.6    1.6  1  SGS       SGS domain
    1.3e-15   58.2   0.5    2.5e-15   57.3   0.5    1.5  1  CS        CS domain
    4.1e-07   29.6   0.1      0.028   14.5   0.0    3.4  3  TPR_2     Tetratricopeptide repeat
    6.9e-07   28.8   0.3       0.11   12.4   0.1    3.4  3  TPR_1     Tetratricopeptide repeat
    1.8e-06   28.4   0.1    6.7e-06   26.6   0.1    1.9  2  TPR_16    Tetratricopeptide repeat
    0.00018   21.7   1.3        0.1   12.9   0.3    2.3  2  TPR_12    Tetratricopeptide repeat
    0.00049   20.1   0.2      0.025   14.8   0.1    3.1  3  TPR_8     Tetratricopeptide repeat
  ------ inclusion threshold ------
       0.04   14.7   0.2       0.35   11.8   0.0    2.5  2  TPR_14    Tetratricopeptide repeat
      0.044   13.5   0.1        2.4    7.9   0.0    3.1  3  TPR_11    TPR repeat
       0.11   13.0   0.0       0.25   11.9   0.0    1.6  1  TPR_19    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> SGS  SGS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.9   0.6   6.1e-31   1.1e-27       1      83 []     317     391 ..     317     391 .. 0.90

  Alignments for each domain:
  == domain 1  score: 95.9 bits;  conditional E-value: 6.1e-31
         SGS   1 kdWdklekelekeekeekkeeegeaalnklFkklYadadedtrrammKSyveSnGtvLstnWeevkkkkvetkpPegmeakkw 83 
                 k+Wd++  +++        ee++ +  +++Fk lY++ad+dt+ram+KSy+eSnGt+Lst+W++v+++k+e+ pPeg+e+kkw
  KHJ32174.1 317 KNWDTVIGKEA--------EEDDADGPDAFFKMLYRNADPDTKRAMIKSYQESNGTSLSTQWSDVGSRKFEIIPPEGVEVKKW 391
                 57777766655........234677899******************************************************9 PP

>> CS  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.3   0.5   1.4e-18   2.5e-15       2      76 .]     187     264 ..     186     264 .. 0.91

  Alignments for each domain:
  == domain 1  score: 57.3 bits;  conditional E-value: 1.4e-18
                 SCEEEEETTEEEEEEE-TTCTTTTTCEEEEEETTEEEEEETSCEEEEECE......BSS-BETTTEEEEEETTEEEEEEEB CS
          CS   2 kydWyQtldeVvvtiyvkkvnikkkdvkvefkerslkvkigkeklliege......LfgpIdpeesswtieskkveitLkK 76 
                 +++WyQ++++V+v+i +k+   +k+ ++v+++ersl+v++ + +   +++      Lf++Id ++ss++ ++ k+ei+L K
  KHJ32174.1 187 RHEWYQSNNTVTVEILAKNT--PKETITVNIQERSLEVSFTN-TSAQNTCyfafepLFSKIDISKSSYRATPHKIEISLHK 264
                 89*****************8..*****************933.4555666888889***********************98 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   1.6e-05     0.028       8      29 ..       8      29 ..       6      32 .. 0.94
   2 !    6.1   0.0    0.0075        13       3      30 ..      36      63 ..      34      66 .. 0.90
   3 ?    5.0   0.0     0.018        32       1      20 [.      74      93 ..      74      97 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.6e-05
       TPR_2  8 GlayyklgdyeeAleafekAle 29
                G+a++ +gdy+ A++++ +Al+
  KHJ32174.1  8 GKALLDSGDYQSAVKYLSEALK 29
                99*******************8 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0075
       TPR_2  3 alynlGlayyklgdyeeAleafekAlel 30
                +l  +  a+ +lg++  Al++ +kAl +
  KHJ32174.1 36 WLLLRSTAHHRLGKHGPALHDANKALLI 63
                7889999******************976 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.018
       TPR_2  1 aealynlGlayyklgdyeeA 20
                ae +y++G ++  l +y + 
  KHJ32174.1 74 AESHYRRGIVLHGLRQYGDS 93
                799*************9775 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.1   6.1e-05      0.11       7      29 ..       7      29 ..       6      30 .. 0.95
   2 ?    4.7   0.0     0.016        28      10      30 ..      43      63 ..      42      64 .. 0.91
   3 !    7.8   0.1    0.0017         3       1      31 [.      74     104 ..      74     107 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.1e-05
                HHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1  7 lGnayfklgkydeAleyyekALe 29
                +G a++  g+y+ A++y ++AL+
  KHJ32174.1  7 KGKALLDSGDYQSAVKYLSEALK 29
                699******************97 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.016
                HHHHTT-HHHHHHHHHHHHHH CS
       TPR_1 10 ayfklgkydeAleyyekALel 30
                a+++lgk+  Al + +kAL +
  KHJ32174.1 43 AHHRLGKHGPALHDANKALLI 63
                7899**************965 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0017
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALeln 31 
                 a+++y++G +++ l +y +   ++  A + n
  KHJ32174.1  74 AESHYRRGIVLHGLRQYGDSRMCFYWARKYN 104
                 799**************99999998887766 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.1   3.8e-09   6.7e-06       4      61 ..       8      62 ..       7      70 .. 0.94
   2 ?   -0.7   0.0       1.3   2.3e+03      33      51 ..      73      91 ..      55      94 .. 0.69

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 3.8e-09
      TPR_16  4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa.alyraal 61
                ++a+l++gdy+ A+++l +alk+      a+ +lll+  a+ r+g + +A+ ++ +a+l
  KHJ32174.1  8 GKALLDSGDYQSAVKYLSEALKSS---Q-APTWLLLRSTAHHRLGKHGPALhDANKALL 62
                899*********************...5.**********************99998876 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.3
      TPR_16 33 aaeAllllgdaalrqgrla 51
                 ae+++ +g ++  +  + 
  KHJ32174.1 73 IAESHYRRGIVLHGLRQYG 91
                6899999999998777665 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.1    0.0024       4.3      52      73 ..       8      29 ..       7      33 .. 0.64
   2 !   12.9   0.3   5.8e-05       0.1       6      71 ..      37     100 ..      32     106 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0024
      TPR_12 52 grlyralgryeeAlelleeala 73
                g +++ +g+y+ A+++l eal+
  KHJ32174.1  8 GKALLDSGDYQSAVKYLSEALK 29
                4556667777777777777765 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 5.8e-05
      TPR_12   6 lnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleea 71 
                 l  + ++++rlg++  Al   +kal i  +   ++++l a++ +  g++++ l +y + +  +  a
  KHJ32174.1  37 LLLRSTAHHRLGKHGPALHDANKALLISINR--GKRELIAESHYRRGIVLHGLRQYGDSRMCFYWA 100
                 44678899********************888..99*********************9998887666 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.1   1.4e-05     0.025       7      32 ..       7      32 ..       5      34 .. 0.91
   2 ?    1.1   0.0      0.33     6e+02       6      30 ..      39      63 ..      37      64 .. 0.85
   3 ?   -0.6   0.0       1.2   2.1e+03       1      24 [.      74      97 ..      74      98 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.4e-05
                HHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8  7 lgsiylklgdyeeAkeyyekaleldp 32
                +g+++l+ gdy++A++y+ +al+ ++
  KHJ32174.1  7 KGKALLDSGDYQSAVKYLSEALKSSQ 32
                799*******************9875 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.33
                HHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_8  6 nlgsiylklgdyeeAkeyyekalel 30
                + + +++ lg++  A    +kal +
  KHJ32174.1 39 LRSTAHHRLGKHGPALHDANKALLI 63
                5677999**************9976 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 1.2
                CCHHHHHHHHHHHTT-HHHHHHHH CS
       TPR_8  1 aeayynlgsiylklgdyeeAkeyy 24
                ae++y+ g +++ l +y  +  ++
  KHJ32174.1 74 AESHYRRGIVLHGLRQYGDSRMCF 97
                7899*********99998777665 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00019      0.35       8      33 ..       8      35 ..       5      50 .. 0.80
   2 ?   -0.9   0.0       2.3   4.2e+03       2      27 ..      75     100 ..      74     107 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00019
      TPR_14  8 aeallalGdpdeAiallrrala..laPd 33
                ++all +Gd++ A+++l +al+  +aP+
  KHJ32174.1  8 GKALLDSGDYQSAVKYLSEALKssQAPT 35
                789*****************99555554 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 2.3
      TPR_14   2 eallalaeallalGdpdeAiallrra 27 
                 e +++++ +l  l+++ +++ ++ +a
  KHJ32174.1  75 ESHYRRGIVLHGLRQYGDSRMCFYWA 100
                 56788899998888888887777666 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0014       2.4       1      22 [.       8      29 ..       8      36 .. 0.94
   2 ?    0.1   0.0      0.38   6.8e+02      28      39 ..      74      85 ..      74      87 .. 0.86
   3 ?    0.8   0.0      0.23     4e+02      18      33 ..     325     340 ..     325     341 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0014
      TPR_11  1 GdayyeqGkyeeAieaYkkAlk 22
                G+a+ + G+y  A++ +++Alk
  KHJ32174.1  8 GKALLDSGDYQSAVKYLSEALK 29
                89******************98 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.38
      TPR_11 28 aeayynLGlayy 39
                ae +y +G +++
  KHJ32174.1 74 AESHYRRGIVLH 85
                789******998 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.23
      TPR_11  18 kkAlkldPdnaeayyn 33 
                 k+A + d d ++a+++
  KHJ32174.1 325 KEAEEDDADGPDAFFK 340
                 68999*********98 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00014      0.25       1      23 [.      11      33 ..      11      48 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00014
      TPR_19  1 llaegdyaeAlalleqalqedpk 23
                ll++gdy++A+++l++al+ +  
  KHJ32174.1 11 LLDSGDYQSAVKYLSEALKSSQA 33
                799**************876554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       797  (0.0444531); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2809.56
//
Query:       KHJ32175.1  [L=211]
Description: hypothetical protein EV44_g4970 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.041   12.5   1.2      0.052   12.1   1.2    1.1  1  FapA      Flagellar Assembly Protein A
       0.17   12.3   2.2       0.17   12.3   1.1    1.5  2  DUF1690   Protein of Unknown function (DUF1690)
       0.22   11.8   2.1        3.2    8.0   0.3    3.0  3  DUF5082   Domain of unknown function (DUF5082)


Domain annotation for each model (and alignments):
>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.2   8.8e-06     0.052     334     421 ..      26     110 ..      15     128 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 8.8e-06
        FapA 334 elkeklkeleeeleeleeeleklkkk.ikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeeleskkeeakikvnk 421
                 +l e  + l  +l++l+e++e+l+k  i+ ++k    ++ e++++  ++k +++  ++++++++l++  +++++   ++ +++k k++ 
  KHJ32175.1  26 TLVELKDILTGDLNRLRENIERLNKVwIEAVEK----NMPEEKCSHYFDKFETAELRYEDKISQLKDVVQQISKLRIEGLSAKKAKIQT 110
                 555666889999**************8777777....666789***************************9887655553555555554 PP

>> DUF1690  Protein of Unknown function (DUF1690)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   1.1   2.9e-05      0.17      19     114 ..      12     112 ..       8     113 .. 0.80
   2 ?   -3.2   0.0       1.7     1e+04      25      46 ..     168     189 ..     157     199 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.9e-05
     DUF1690  19 ssketdasraqalekliqer..VaeeLkkLraeeeetlkkfeeklekellkde...adakdelsskalnekieeLrkkleefkkkeeeklpeeveeare 112
                 +s+ +d++r+ + e l++ +   + +L++Lr++ e+  k   e++ek++ +++     +k e+ + + ++ki++L++ +++ +k + e l+++++++++
  KHJ32175.1  12 HSPSSDYERNVEFETLVELKdiLTGDLNRLRENIERLNKVWIEAVEKNMPEEKcshYFDKFETAELRYEDKISQLKDVVQQISKLRIEGLSAKKAKIQT 110
                 6889*************97766899*****88888777777777777777777855334445555566899*************999999999999988 PP

     DUF1690 113 ev 114
                 +v
  KHJ32175.1 111 AV 112
                 76 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.7
     DUF1690  25 asraqalekliqerVaeeLkkL 46 
                 a r++++++ i + +++  + L
  KHJ32175.1 168 AGRRTYIDAIILASIDHATRGL 189
                 4567777777777776666666 PP

>> DUF5082  Domain of unknown function (DUF5082)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1     0.081   4.9e+02      15      31 ..      34      50 ..      25      63 .. 0.75
   2 ?    8.0   0.3   0.00054       3.2      76     108 ..      62      94 ..      52     110 .. 0.78
   3 ?   -0.1   0.0      0.18   1.1e+03      89     111 ..     178     200 ..     169     207 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.081
     DUF5082 15 lrseiaaleekIerLke 31
                l ++++ l e IerL +
  KHJ32175.1 34 LTGDLNRLRENIERLNK 50
                45667777888888876 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00054
     DUF5082  76 essyqtyvdkldelidaieeEIerLenqiseaq 108
                 e+++++y dk ++++ + e++I++L+  +++ +
  KHJ32175.1  62 EEKCSHYFDKFETAELRYEDKISQLKDVVQQIS 94 
                 678999999999999999999999987766654 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.18
     DUF5082  89 lidaieeEIerLenqiseaqgvl 111
                 + ++i+  ++ Le+++++++++ 
  KHJ32175.1 178 ILASIDHATRGLEEERMDKEWDT 200
                 45789999999****99999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1114  (0.062134); expected 358.6 (0.02)
Passed bias filter:                      738  (0.0411624); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 1591.20
//
Query:       KHJ32176.1  [L=163]
Description: putative translocon protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-18   66.9   1.8    1.8e-18   66.3   1.8    1.4  1  Sec61_beta  Sec61beta family
  ------ inclusion threshold ------
      0.047   14.1   2.3      0.063   13.7   2.3    1.1  1  DUF1180     Protein of unknown function (DUF1180)


Domain annotation for each model (and alignments):
>> Sec61_beta  Sec61beta family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.3   1.8     2e-22   1.8e-18       1      41 []     115     155 ..     115     155 .. 0.98

  Alignments for each domain:
  == domain 1  score: 66.3 bits;  conditional E-value: 2e-22
                 XXXXXXXXXX----SS-B-THHHHHHHHHHHHHHHHHTSS- CS
  Sec61_beta   1 SsaGLlryyeedapgikidPkvVlvlsvafiasVilLhila 41 
                 Ss+++lr y++++pg+k+dP+vVlvls++fi+sV++Lh++a
  KHJ32176.1 115 SSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHVIA 155
                 8*************************************985 PP

>> DUF1180  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   2.3   7.1e-06     0.063      11     101 ..      38     132 ..      32     161 .. 0.49

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 7.1e-06
     DUF1180  11 LlllLaasaada.sralspaasspeae...........pPlpp.gataaespgkataieaksaqaaeggngsspragsaadaggslavvpelssntdkp 96 
                 L+ lL+a a+++ s+++sp +ssp              +P+pp g+ +a  + +a a   +  +aa+ +  s+  ag+ + +++ l + +      d+ 
  KHJ32176.1  38 LPALLSALANEIkSPESSPRPSSPANAaarivttgrqaSPMPPgGPKTA-IRRRAAA--DQRDKAANARPSSTRAAGAGGSSSTMLRLYT------DES 127
                 6778888666551445555555554447889999999988888422222.3444444..3444555555555544444433333333333......222 PP

     DUF1180  97 mtlqr 101
                   l+ 
  KHJ32176.1 128 PGLKV 132
                 22221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       752  (0.0419432); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1290.67
//
Query:       KHJ32177.1  [L=1381]
Description: putative transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-27   95.7   0.3    1.3e-26   93.9   0.3    2.0  1  VASt      VAD1 Analog of StAR-related lipid transfer domain
    1.5e-14   54.3   1.0    2.4e-14   53.6   0.0    1.9  2  BAR_3     BAR domain of APPL family
    4.9e-09   36.6   0.2    7.7e-08   32.8   0.1    3.1  3  PH        PH domain
  ------ inclusion threshold ------
      0.047   13.6   0.0       0.15   11.9   0.0    1.8  1  GRAM      GRAM domain


Domain annotation for each model (and alignments):
>> VASt  VAD1 Analog of StAR-related lipid transfer domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.9   0.3   2.9e-30   1.3e-26       2     152 ..     911    1055 ..     910    1056 .. 0.95

  Alignments for each domain:
  == domain 1  score: 93.9 bits;  conditional E-value: 2.9e-30
                  EEEEEESS-HHHHHHHHHSS-THHHHHHHHH.TT-BS-H.HHSE.........EEEEEEEE--SSSS-SEEEEEEEEE..EEEEET.TEEEEEEEEE CS
        VASt    2 lveevlpisvkalfellfgdkseflkkfleerqkttdisvgpweeakekgkltRklsytkplkgsigpkqtkvtetqtilveeddl.yyivvvtttk 97  
                  +ve++++i +kalf+++fgd+s +++kf+  r +  +i++gpw+  +  g  +R++   +  ++ +  +q ++t+ q i+++ed+l y   +v+   
  KHJ32177.1  911 IVERQFNIGSKALFHVIFGDNSHIFQKFYYYR-GAENITQGPWQALD-YGLIKREFFLEISQSNLFQKHQLNITDLQIIDIKEDHLrY---IVSYQN 1002
                  89*****************************9.**********6555.6****************99*******************99...****** PP

                  -T.TSTTTTSEEEEEEEEEEEETTTE..E.EEEEEEEEEES.S--TTHHHHHHHHH CS
        VASt   98 tpldvPygdsFsvetryvitwgsknskstcrltvstkvefs.ksswlkgiIekgal 152 
                  t++++P + +F+++ ++vit ++   ks+c+l+ + +v++s k++++kgiIe++al
  KHJ32177.1 1003 TFWHLPCCLNFKLVFKIVITYVA---KSKCKLAFYANVDWSvKPVLFKGIIERQAL 1055
                  *********************66...5678***********88999*******985 PP

>> BAR_3  BAR domain of APPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.0   5.3e-18   2.4e-14       3     174 ..      24     198 ..      22     202 .. 0.89
   2 ?   -3.8   0.2       1.9   8.6e+03      65     109 ..     787     831 ..     784     841 .. 0.76

  Alignments for each domain:
  == domain 1  score: 53.6 bits;  conditional E-value: 5.3e-18
       BAR_3   3 feeclkDSPkfResleevEaeleelekklkkllKlckrlieagkaysaaqkqf.aqsLrelkkes..kgdeetdesLkkfsellqelenehtilldqaq 98 
                 + e+  DSP fR+    + + +  +ek+l+  +K +++l++   ++ + ++++  +s+   ++    ++ ++t  +L+k +e+ +    + +  +++++
  KHJ32177.1  24 LREASCDSPTFRALAIHFSDQVAIVEKWLNAYIKYISKLVADLAKIEESFNNViLRSVPPPSITEaiIDHDYTLLALNKYGESSRDWLMQTMSCMKRME 122
                 679999*********************************99888777665554145555544444556666666************************* PP

       BAR_3  99 rsikkpLekFrkedlkevkekkkkFdkesekleaaleknaqlskkkkeseleeadnelkatrkkfhqasldyvlqi 174
                 ++i++p++ F+  +l+ +ke++++ d+ ++ +++ l+++ + sk+k +s l+e + +++++rk + +as d +  i
  KHJ32177.1 123 SQISEPVKVFINGELRVFKEARRNLDQTQKLFDQMLARYVSQSKTKAPSALREDAFQVYEARKAYLKASFDFCTLI 198
                 **********************************************************************998765 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 1.9
       BAR_3  65 eskgdeetdesLkkfsellqelenehtilldqaqrsikkpLekFr 109
                 ++++d+    +Lk f e ++ l +  + l+ + q  ++++Le+ +
  KHJ32177.1 787 QDIKDTASRIALKIFLEPFRLLQSRLSYLIHNSQAEVTASLEDIL 831
                 567777778888888888888888888888888888888887765 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.1   1.7e-11   7.7e-08       2     104 ..     312     410 ..     311     411 .. 0.81
   2 ?   -1.4   0.0      0.73   3.3e+03      39      83 ..     669     707 ..     653     715 .. 0.73
   3 ?   -2.6   0.0       1.8   8.2e+03      25      72 ..     742     782 ..     733     792 .. 0.78

  Alignments for each domain:
  == domain 1  score: 32.8 bits;  conditional E-value: 1.7e-11
                 EEEEEEE...EETSSSSC..SEEEEEEEEETTEEEEESST.TCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHH CS
          PH   2 vkeGwLl...kkgsgkkk..swkkrwfvLkdsellyyknd.ksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerk 94 
                 +k+GwL+       gk +  sw +rwf++k   ++ + ++   + + e  g i +  c ++  v   +++r+fcfe++++     +++llqa++++ + 
  KHJ32177.1 312 EKQGWLFlriI--TGKPTrtSWVRRWFYVK-AGIFGWLAQgTYSGAVEESGRIGVLLCNIKPAV---QEDRRFCFEIKTK----NQSVLLQAETQQILM 400
                 799**774332..2222357**********.666666666578899999************866...**********999....389************ PP

                 HHHHHHHHHH CS
          PH  95 eWikaiqsai 104
                 eW++ +++a+
  KHJ32177.1 401 EWLEVFERAK 410
                 ***9999886 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.73
                 TTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEE CS
          PH  39 ekdkepkgsislsncevvevvatedpkrkfcfelriverngsrty 83 
                 +++ + kg ++ +++++ +v  +e+ + ++ fel  +    ++++
  KHJ32177.1 669 NHELSSKGNLEAIKLQSYRV--PENLPANYPFELMSQ----DSQF 707
                 56666777777778888877..8999*******9555....2333 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 1.8
                 EETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEE CS
          PH  25 Lkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfel 72 
                 +++  +++y+ +   +   + + ++++++++     t+ p+r+f f +
  KHJ32177.1 742 VTQRYIYFYSHH---HGLVLVTGVNMKDVSDI----TAAPGRDFDFIF 782
                 556778999999...88888888888888888....558888888866 PP

>> GRAM  GRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.3e-05      0.15      32      70 ..     737     775 ..     720     780 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.3e-05
                 EEEEEEESSEEEEEE-STT---EEEEEGGGEEEEEE... CS
        GRAM  32 qGrlyltnyrlcFrskplgsskkvvlpladikrieksts 70 
                  Gr+y+t+ +++F+s   g      ++++d+++i   ++
  KHJ32177.1 737 PGRIYVTQRYIYFYSHHHGLVLVTGVNMKDVSDITAAPG 775
                 6****************9999656669999999887555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       681  (0.0379832); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.79u 0.26s 00:00:01.05 Elapsed: 00:00:00.43
# Mc/sec: 9755.03
//
Query:       KHJ32178.1  [L=324]
Description: putative flavin reductase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.1e-19   68.6   0.0    8.2e-19   68.2   0.0    1.2  1  Flavin_Reduct  Flavin reductase like domain
  ------ inclusion threshold ------
      0.019   15.2   0.4      0.038   14.2   0.0    1.6  2  BORCS6         BLOC-1-related complex sub-unit 6


Domain annotation for each model (and alignments):
>> Flavin_Reduct  Flavin reductase like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.2   0.0   9.2e-23   8.2e-19       1     154 [.     106     315 ..     106     316 .. 0.77

  Alignments for each domain:
  == domain 1  score: 68.2 bits;  conditional E-value: 9.2e-23
                    HTTS-EE-EEEEE.EE.........TTEEE...............EEEESSEEEEETTT.TEEEEEEETTSHHHHHHHHHSEEEEEEEBC.CGHH. CS
  Flavin_Reduct   1 mrrvaqpvavvttsvp.........ptspl...............gatlssftslsldP.plvafslrlpsstadalkeagefvinllse.sqea. 69 
                    mr ++q +a++tt +          +                   g+tlss+ +++l+P p+++f++++ps t++a+k  g f i++ s  +  a 
     KHJ32178.1 106 MRYIPQSIAILTT-CTipkldfyrsT---TqvsgyiddtshskgiGMTLSSVSTVTLQPePIISFNIKKPSNTLEAIKYHGNFLIHFPSCsKAGAi 197
                    999**********.775566555541...04567777777788888*****************************************888555667 PP

                    HHHHTCS.....SCCCCCCCCCCCEEECT...............CCCSEEETTCSEEEEEEEEEE....ECCTTEEEEEEEEEEEEESTTECTT.. CS
  Flavin_Reduct  70 ladafsqksg..prtddksifagltwees...............ptgapallgalasleCqvvgs....velgdhelfigeVvavkvgddadee.. 142
                    lad fs++ +  ++++++ +   ++ e+s               p  +p +    + l C++ ++    +++ dh +++++V +++  ++ +++  
     KHJ32178.1 198 LADTFSRGGRylQSDSHSRKEIRTSFERStpisvinfdgqninlPALLPPIYPINYMLKCEIYDRvngyIDIADHVIVVAKVHKIRCISKSSSSyk 293
                    *******8877655555533335555555766667766663333333366688999********8666677889***********99998664578 PP

                    ..........BEECCCCCEEEE CS
  Flavin_Reduct 143 ..........pLlywrrryagl 154
                               L y ++ y+++
     KHJ32178.1 294 stsniqerdsCLAYTNGTYCST 315
                    8888888877788888888876 PP

>> BORCS6  BLOC-1-related complex sub-unit 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   4.3e-06     0.038      32     103 ..      63     133 ..      36     145 .. 0.74
   2 ?   -3.2   0.1      0.97   8.7e+03      15      28 ..     281     294 ..     276     310 .. 0.48

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 4.3e-06
      BORCS6  32 sesstpsaslskqllaaqipeidpnvlsdlereaqkvaasvdnllenlssklhsisaltvgnietykdavdk 103
                 + s ++++ + +q   ++  ei++++++  e++ +++ ++v ++++ +  ++  +++ t+  ++ y+ + + 
  KHJ32178.1  63 NISPSECE-TINQPIIPDRSEIEQKLIMGFEEQVENIPDKVRQIMRYIPQSIAILTTCTIPKLDFYRSTTQV 133
                 22222232.23577889999**********************************************987654 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.97
      BORCS6  15 kiklsssvskkees 28 
                 ki+  s++s++ +s
  KHJ32178.1 281 KIRCISKSSSSYKS 294
                 44444443333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2538.22
//
Query:       KHJ32179.1  [L=508]
Description: hypothetical protein EV44_g3313 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    0.00017   21.5   3.3    0.00017   21.5   3.3    2.0  2  zf-CCHC       Zinc knuckle
     0.0013   19.1   0.3     0.0013   19.1   0.3    2.0  2  eIF3g         Eukaryotic translation initiation factor 3 subu
     0.0086   16.1   1.8      0.023   14.7   1.8    1.7  1  DUF1664       Protein of unknown function (DUF1664)
  ------ inclusion threshold ------
      0.026   14.3   2.9        1.3    8.9   0.0    3.5  3  rve_3         Integrase core domain
       0.39   11.3   6.7        1.2    9.8   0.4    3.4  3  ING           Inhibitor of growth proteins N-terminal histone
       0.41    8.5   2.5       0.67    7.8   2.5    1.4  1  Prominin      Prominin
        1.7    9.2   7.9         27    5.4   0.1    3.4  3  Syntaxin-6_N  Syntaxin 6, N-terminal
        3.2    8.0   8.4        6.5    7.0   4.5    3.0  3  XhlA          Haemolysin XhlA
        4.8    7.0   8.6       0.85    9.4   4.4    1.9  2  zf-CCHC_5     GAG-polyprotein viral zinc-finger
        8.5    6.3   6.6         35    4.4   2.5    2.7  3  GIT_CC        GIT coiled-coil Rho guanine nucleotide exchange


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1       1.6   2.9e+03      12      18 .]     236     242 ..     236     242 .. 0.88
   2 !   21.5   3.3   9.7e-08   0.00017       2      17 ..     395     410 ..     394     410 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.6
                 TTTTSTS CS
     zf-CCHC  12 iardCpk 18 
                 +a +C++
  KHJ32179.1 236 WATECKQ 242
                 899**96 PP

  == domain 2  score: 21.5 bits;  conditional E-value: 9.7e-08
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +Cy+C++ GH+a+ Cp
  KHJ32179.1 395 VCYHCQRKGHWASKCP 410
                 7**************9 PP

>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1       8.9   1.6e+04      90      98 ..     124     132 ..     104     139 .. 0.48
   2 !   19.1   0.3   7.2e-07    0.0013      92     124 ..     383     414 ..     349     415 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 8.9
       eIF3g  90 eekekaklk 98 
                 + +e +k+k
  KHJ32179.1 124 KAEESKKMK 132
                 222222222 PP

  == domain 2  score: 19.1 bits;  conditional E-value: 7.2e-07
       eIF3g  92 kekaklkkkekklvkCriCk.gdHfTskCPykdt 124
                 ++++++  +  +  +C +C+   H+ skCPyk++
  KHJ32179.1 383 NQLEQAYVS--NNDVCYHCQrKGHWASKCPYKHQ 414
                 444444422..3359****879**********86 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   1.8   1.3e-05     0.023      33     119 ..      19     105 ..      16     107 .. 0.96

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.3e-05
     DUF1664  33 fvTkrslsdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskler 119
                 f  ++ l+d ++++ ++ e++ ++++    + + r +++++ l  ++++  ++++ +++++e  ++i++ + ++++  ++le++l++
  KHJ32179.1  19 FSLNKKLNDSLADIDTKFENLTKTIELGHANTNGRTEKIEQWLTRTEKVNLNTERRMDRIEEANHDIRKILIQIQNSLSSLENQLNS 105
                 556899*****************************************************************************9975 PP

>> rve_3  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.21   3.7e+02       6      43 ..      41      82 ..      39      90 .. 0.65
   2 ?    8.9   0.0   0.00072       1.3      15      53 ..     275     314 ..     273     315 .. 0.89
   3 ?    2.0   0.2       0.1   1.9e+02      32      56 ..     331     355 ..     327     358 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.21
       rve_3  6 syiapgkPqqNglvEsfngtl.rdellneel...frslaear 43
                + i+ g++++Ng  E + + l r+e +n +    +++++ea+
  KHJ32179.1 41 KTIELGHANTNGRTEKIEQWLtRTEKVNLNTerrMDRIEEAN 82
                568899999999999987754256666655533344555555 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00072
       rve_3  15 qNglvEsfngtlrdellneel.frslaearekleawredY 53 
                 +N  +Esf ++lrd ++  +   rs+++++ ++++   +Y
  KHJ32179.1 275 TNDSIESFARRLRDSFYRLPRnDRSSSTVQFMITDLCSRY 314
                 6889**************9999999999999998877776 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.1
       rve_3  32 neelfrslaearekleawredYNte 56 
                 n +  +++ + ++ + +w ++YN+ 
  KHJ32179.1 331 NDQRIEKIVQIARRVSRWDDEYNKF 355
                 5566678999999**********85 PP

>> ING  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.4   0.00067       1.2      21      70 ..      27      86 ..      20      90 .. 0.86
   2 ?    6.1   2.9    0.0091        16       3      68 ..      58     137 ..      57     157 .. 0.80
   3 ?    1.7   0.0      0.21   3.8e+02       6      46 ..     276     325 ..     272     357 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00067
                HHHHHHHHHHHHHHHHH..........HHHHHHHHTS..S-HHHHHHHHHHHHHHHHHHH CS
         ING 21 telreiDakvqellkei..........dskiekflkngslqknekeeelsriqeelkeaq 70
                + l +iD k+++l+k i           +kie++l+++++ + + e+++ ri+e+ +++ 
  KHJ32179.1 27 DSLADIDTKFENLTKTIelghantngrTEKIEQWLTRTEKVNLNTERRMDRIEEANHDIR 86
                67999*******************9999*******9999999999999999998877665 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0091
                 HHHHTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..............TS..S-HHHHHHHHHHHHHHHHH CS
         ING   3 edyldsvenLPlelqrnltelreiDakvqellkeidskiekfl..............kngslqknekeeelsriqeelke 68 
                 e++l   e++ l ++r+++++ e    ++++l +i+++++++               +++++++++k ee ++++e+ ++
  KHJ32179.1  58 EQWLTRTEKVNLNTERRMDRIEEANHDIRKILIQIQNSLSSLEnqlnsqtppnikysESQDIKQPPKAEESKKMKENRET 137
                 89999******************************777766666657777888888877778888888888888877665 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.21
                 HTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.........T CS
         ING   6 ldsvenLPlelqrnltelreiDakvqellkeidskiekfl.........k 46 
                  ds+e++   l++ + +l   D + ++++  i + ++++l          
  KHJ32179.1 276 NDSIESFARRLRDSFYRLPRNDRSSSTVQFMITDLCSRYLprvwtiaepV 325
                 599********************999999999999999997777775552 PP

>> Prominin  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.5   0.00037      0.67     248     335 ..      68     161 ..      18     211 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00037
    Prominin 248 lkeakeqLeqvnklekeLrksgsqLrdglrgvkrdlnqalsnlCqseeCskils...sleiekldtskcl...dqlpnvdevlealeevletnl 335
                   ++++ +  +++   ++rk   q++++l++  ++ln+    +++ +e ++i++    +e +k++ +++    +++pn +++l+++e+ +++  
  KHJ32179.1  68 NLNTERRMDRIEEANHDIRKILIQIQNSLSSLENQLNSQTPPNIKYSESQDIKQppkAEESKKMKENRETpipSSIPNDKHQLTDVEKFVKETW 161
                 3357899*******************************99999995566665541115666678888877999**************9988765 PP

>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.1     0.015        27      34      70 ..      13      49 ..       4      58 .. 0.81
   2 ?    4.1   3.7     0.039        69      21      65 ..      57     104 ..      48     160 .. 0.77
   3 ?   -2.2   0.0       3.4   6.1e+03      33      48 ..     195     210 ..     168     216 .. 0.60

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.015
  Syntaxin-6_N 34 stseeldetrteLrkalrsiewdledLeetvrivekn 70
                  s ++++ +++++L+ +l +i+++ e+L +t++   +n
    KHJ32179.1 13 SGQPNIFSLNKKLNDSLADIDTKFENLTKTIELGHAN 49
                  4678888999*********************866555 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.039
  Syntaxin-6_N  21 yrrw...erlledtssstseeldetrteLrkalrsiewdledLeetvr 65 
                   +++w   ++  +++++++ + ++e+++++rk l +i++ l+ Le+  +
    KHJ32179.1  57 IEQWltrTEKVNLNTERRMDRIEEANHDIRKILIQIQNSLSSLENQLN 104
                   4455422222444445689************************99873 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 3.4
  Syntaxin-6_N  33 sstseeldetrteLrk 48 
                   ++  ++l+e ++ Lr+
    KHJ32179.1 195 TDVLDKLSEIQSALRT 210
                   2234444444444444 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.29   5.3e+02       4      20 ..      27      43 ..      24      55 .. 0.74
   2 ?    7.0   4.5    0.0036       6.5       2      47 ..      57     102 ..      48     106 .. 0.79
   3 ?   -3.2   0.0       5.6     1e+04      38      54 ..     195     211 ..     192     213 .. 0.64

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.29
        XhlA  4 erlerietkldnleerv 20
                + l+ i+tk +nl +++
  KHJ32179.1 27 DSLADIDTKFENLTKTI 43
                67888888888888753 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0036
        XhlA   2 ikerlerietkldnleervdkleekaaeaeekiknleedlkklesn 47 
                 i++ l+r+e+   n e r+d++ee +   ++ ++++++ l++le++
  KHJ32179.1  57 IEQWLTRTEKVNLNTERRMDRIEEANHDIRKILIQIQNSLSSLENQ 102
                 6777777777777777788888888888888888888888888876 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 5.6
        XhlA  38 eedlkklesnqkWlirt 54 
                 ++ l+kl + q  l+++
  KHJ32179.1 195 TDVLDKLSEIQSALRTA 211
                 55677777777776665 PP

>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       2.9   5.3e+03      14      19 ..     236     241 ..     236     243 .. 0.92
   2 ?    9.4   4.4   0.00048      0.85       3      19 ..     394     410 ..     392     417 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2.9
                 -TTT-- CS
   zf-CCHC_5  14 wardCh 19 
                 wa +C+
  KHJ32179.1 236 WATECK 241
                 9****7 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00048
                 -B-TTT-SSBS-TTT-- CS
   zf-CCHC_5   3 glCpRCkkgkHwardCh 19 
                 + C  C +  Hwa+ C 
  KHJ32179.1 394 DVCYHCQRKGHWASKCP 410
                 78**************6 PP

>> GIT_CC  GIT coiled-coil Rho guanine nucleotide exchange factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       5.2   9.3e+03      38      56 ..      21      39 ..      15      41 .. 0.70
   2 ?    4.4   2.5      0.02        35      27      58 ..      70     101 ..      65     107 .. 0.89
   3 ?    2.9   0.0     0.057     1e+02      35      54 ..     190     209 ..     179     212 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 5.2
      GIT_CC 38 vNtslsdelrlLQskvqkL 56
                 N++l+d l+ +  k ++L
  KHJ32179.1 21 LNKKLNDSLADIDTKFENL 39
                6888888887776666555 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.02
      GIT_CC  27 aseakiqqLlkvNtslsdelrlLQskvqkLqa 58 
                 + e+++  + ++N  + + l ++Q+++ +L++
  KHJ32179.1  70 NTERRMDRIEEANHDIRKILIQIQNSLSSLEN 101
                 679**************************975 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.057
      GIT_CC  35 LlkvNtslsdelrlLQskvq 54 
                 L ++Nt   d+l+++Qs + 
  KHJ32179.1 190 LTRANTDVLDKLSEIQSALR 209
                 889**************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1373  (0.0765798); expected 358.6 (0.02)
Passed bias filter:                      623  (0.0347482); expected 358.6 (0.02)
Passed Vit filter:                        82  (0.0045736); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.40
# Mc/sec: 3772.18
//
Query:       KHJ32180.1  [L=165]
Description: putative enolase-phosphatase e1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.018   15.3   0.0      0.022   15.0   0.0    1.1  1  Hydrolase  haloacid dehalogenase-like hydrolase
      0.092   12.8   0.0        0.2   11.7   0.0    1.6  1  HAD_2      Haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   2.5e-06     0.022     117     210 .]      29     131 ..      19     131 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2.5e-06
                 HHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH.TT.GGGESEEEEHHCES.STTT..SHHHHHHHHHHHT.....STGGGEEEEESSHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx.xxxxxxxxxxxxxx.xxxx..xxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxx RF
   Hydrolase 117 lkvkpeaaeavasLkaagievvlltgdnpetaeraanq.lG.ddyfdaviasdiet.vakp..spegkvaaireLq.....gkpeevamVGDgvnDaaa 205
                 ++++ ++a +++++k ag+ +++ ++++ + ++ ++ q    d  +   i+++ +t  a+p  +   + ++i e++      + ++ +++ D+v  ++a
  KHJ32180.1  29 CPLFSDVAPMLKKWKNAGLHIFIYSSGSVAAQK-LLFQyTQeDADLRPLISGYFDTlNAGPktLSTSYTRLITECNidgvkRDSSHWLFFSDRVEEVSA 126
                 56899********************99985555.55552668777888999999999666655899*********97776566999*********9999 PP

                 HHHTT CS
                 xxxxx RF
   Hydrolase 206 laaAg 210
                 +  Ag
  KHJ32180.1 127 ALTAG 131
                 98776 PP

>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.2e-05       0.2      78     178 .]      29     137 ..       8     137 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.2e-05
       HAD_2  78 vkpydgvkelLeeLkeagyklgivTsksreaveekleqlgie.syFdvivtsedvekkKPd..peviekalekl.....klkkeeviyvGDsptDieaa 168
                 + ++++v  +L++ k+ag+++ i +s+s +a++  ++ ++ + ++   i +  d+ +  P+   +++ +++++      k ++++ +++ D    + aa
  KHJ32180.1  29 CPLFSDVAPMLKKWKNAGLHIFIYSSGSVAAQKLLFQYTQEDaDLRPLISGYFDTLNAGPKtlSTSYTRLITECnidgvKRDSSHWLFFSDRVEEVSAA 127
                 67899*************************9999999988774556677777777777554115777777777766655677889999*********** PP

       HAD_2 169 kkagikviav 178
                   ag+k+i+v
  KHJ32180.1 128 LTAGMKAIVV 137
                 ******9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       381  (0.0212505); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1241.52
//
Query:       KHJ32181.1  [L=223]
Description: putative prenyl proteinase rce1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-15   57.2   4.6    1.7e-15   57.2   4.6    2.2  3  CPBP      CPBP intramembrane metalloprotease


Domain annotation for each model (and alignments):
>> CPBP  CPBP intramembrane metalloprotease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0     0.091   1.6e+03      36      49 ..      12      23 ..       2      31 .. 0.79
   2 !   57.2   4.6   9.4e-20   1.7e-15       5      92 .]      51     160 ..      47     160 .. 0.81
   3 ?   -2.8   0.2      0.47   8.5e+03      63      63 ..     198     198 ..     179     214 .. 0.52

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.091
                S-HHHHHHHHHHHH CS
        CPBP 36 sstlailissilFg 49
                +   ++l++silF+
  KHJ32181.1 12 W--KSLLLTSILFA 23
                5..77899999997 PP

  == domain 2  score: 57.2 bits;  conditional E-value: 9.4e-20
                 HHHHHHHHHHHHHHHHHHHTTCHHHH..HHHH.S-HHHHHHHHHHHHHCSGGGHHHH....................HHHHHHHHHHHHHHHHTT-HHH CS
        CPBP   5 llvfllalllapllEEllfRglllql..lqergsstlailissilFglaHlpngpsv....................llaalaGlvlgylylktgslla 81 
                  ++ +++++++p++EE+lfR+  ++   l++  s    il   ++FglaHl++++ +                     +++++G + +++y+++gsll+
  KHJ32181.1  51 TWIGWRNYVVGPVTEEILFRSASIPIilLSRMISTPRLILQPPLIFGLAHLHHFYEFrimyphapesaalmqsllqlGYTTAFGAYATFIYVRSGSLLS 149
                 78999****************9999532444466466666677**********444555666666666666666666********************** PP

                 HHHHHHHHHHH CS
        CPBP  82 aillHallnll 92 
                 +il+Ha++n++
  KHJ32181.1 150 VILVHAFCNWV 160
                 *********85 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 0.47
                 H CS
        CPBP  63 a 63 
                 +
  KHJ32181.1 198 I 198
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      198  (0.0110436); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1773.75
//
Query:       KHJ32182.1  [L=854]
Description: putative serine-rich protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (854 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       863  (0.0481343); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.44
# Mc/sec: 5842.52
//
Query:       KHJ32183.1  [L=209]
Description: putative vacuolar protein sorting protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-13   49.7  11.9    3.1e-13   49.7  11.9    1.4  2  Snf7            Snf7
      0.002   18.1   2.5     0.0032   17.4   2.5    1.3  1  Ist1            Regulator of Vps4 activity in the MVB pathway
  ------ inclusion threshold ------
      0.011   15.4   0.0      0.025   14.2   0.0    1.6  1  DMSP_lyase      Dimethlysulfonioproprionate lyase
       0.02   14.2   0.5      0.025   13.9   0.5    1.2  1  Dcc1            Sister chromatid cohesion protein Dcc1
      0.064   13.7   0.7       0.11   13.0   0.3    1.6  1  BNIP2           Bcl2-/adenovirus E1B nineteen kDa-interacting
        1.9    9.1   8.4         13    6.4   0.0    3.5  3  DUF1843         Domain of unknown function (DUF1843)
        2.4    8.8  10.7       0.78   10.4   2.7    3.2  3  HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interac


Domain annotation for each model (and alignments):
>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.7  11.9   1.2e-16   3.1e-13       5     169 ..      10     178 ..       6     182 .. 0.91
   2 ?    2.3   0.2     0.043   1.1e+02     140     168 ..     147     177 ..     147     207 .. 0.53

  Alignments for each domain:
  == domain 1  score: 49.7 bits;  conditional E-value: 1.2e-16
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTCC CS
        Snf7   5 sLrkaerkldkkqeslekkikkleaelkklakkgnkdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqgakamkamnkkvdi 103
                 +L+ + ++l+++  + +k +k ++ +lkk ++ g  + a++++   +r  +++ +l    +++++v+  ++++ ++ +v  +m ++ k m +++k +d+
  KHJ32183.1  10 NLKFTAKQLNRQAAKATKDEKVEKDKLKKAIQAGHSEIAKIYAQNAIRKQNERLNLLRLASRIDAVASRVQTAVTMRQVTGSMTNVVKGMDQAMKSMDL 108
                 5778899******************************************************************************************** PP

                 HHHHHHHHHHHHHHHHHTCHHHHHHHHHTT-..GGTTHHHHHHHHHHHHHHHHHCSH...HHHHHHHTXX CS
        Snf7 104 dkidklmdeiedqmekaeeisEalsrsldda..deedEeeleaeLdaLeqelgdeell..desvklpevP 169
                 dki  +md +e q +  +      +++ ++a   +   +++++ ++++++e g e  +  d ++ + ++P
  KHJ32183.1 109 DKISTVMDRFESQFDDLDVATGYYENATTSAtaVATPQDDVDRLINQVADEAGVELHQemDVAQAVTSAP 178
                 **************************999997777889*************9998844444444444444 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.043
                 HHHHHHHHHHHHHHHHCSH...HHHHHHHTX CS
        Snf7 140 eeleaeLdaLeqelgdeell..desvklpev 168
                 +++++ ++++++e g e  +  d ++ + ++
  KHJ32183.1 147 DDVDRLINQVADEAGVELHQemDVAQAVTSA 177
                 5666666666666555553233223333333 PP

>> Ist1  Regulator of Vps4 activity in the MVB pathway
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   2.5   1.3e-06    0.0032       3     162 ..      10     161 ..       9     163 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1.3e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTT--SSSSSHHHHHHHHHHHHHH-TT CS
        Ist1   3 qlklaiqrlkllqkkkealakqarrdiaqlLengkeekArirveqliredillelleilelycelllarlsllekqkeldeelkEAvssliyAaprvse 101
                 +lk++ ++l+    k ++  k ++  + + +++g+ e A+i +++ ir ++    l  l   ++ + +r+++  ++++++ ++ + v+++  A + + +
  KHJ32183.1  10 NLKFTAKQLNRQAAKATKDEKVEKDKLKKAIQAGHSEIAKIYAQNAIRKQNERLNLLRLASRIDAVASRVQTAVTMRQVTGSMTNVVKGMDQAMKSM-D 107
                 799************************************************99999999999********************************999.8 PP

                 TTTHHHHHHHHHTTS-H.HHHHHHHTT-T.T--HHHHHHHS-----HHHHHHHHHHHHHHHT CS
        Ist1 102 lkELkelrdllaekyGk.efakaavenkdngVnekvvkklsvktpskelvekylkeIAkeyn 162
                 l  ++++ d + +++ + ++a+   en +       ++   v+tp++  v+++++++A+e +
  KHJ32183.1 108 LDKISTVMDRFESQFDDlDVATGYYENAT-------TSATAVATPQD-DVDRLINQVADEAG 161
                 88888888888777776555555555432.......33444444433.34566666666655 PP

>> DMSP_lyase  Dimethlysulfonioproprionate lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   9.9e-06     0.025       6      70 ..      72     136 ..      68     143 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 9.9e-06
  DMSP_lyase   6 varvfarlatalperdrqgerlPvvkhleaalalaeedalralvralkalepaLeweqsyseada 70 
                 +++v +r++ta  +r+++g+   vvk +++a+++ + d+++ +++++++  ++L   ++y+e+  
  KHJ32183.1  72 IDAVASRVQTAVTMRQVTGSMTNVVKGMDQAMKSMDLDKISTVMDRFESQFDDLDVATGYYENAT 136
                 6789999*************************************************998888654 PP

>> Dcc1  Sister chromatid cohesion protein Dcc1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.5   9.7e-06     0.025     115     221 ..      17     122 ..       4     160 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 9.7e-06
                 THHHHH...TSS-S-SHHHHHHTSSS-HHHHHHHHHHCTEEEETTEEEEE-HHHHHHHHHHHHHHHHHTT--TB-H..HHHHHHHHTTST.--HHHHHH CS
        Dcc1 115 eeeedaksaeekekytleeLlenvqaSeaElkkaLkelgaleidGrlrllspsylselLelvlallveesldldavpeeelvealaedge.vpeevieq 212
                 + +++a++a+++ek++ ++L++++qa ++E+ k+ ++  + + ++rl ll  +   +++   ++++v   +   ++   ++v+ +++ ++ +  + i +
  KHJ32183.1  17 QLNRQAAKATKDEKVEKDKLKKAIQAGHSEIAKIYAQNAIRKQNERLNLLRLASRIDAVASRVQTAVTMRQVTGSM--TNVVKGMDQAMKsMDLDKIST 113
                 44566777888899***********************8888***********999999999999998888887777..789999988888888999999 PP

                 HHHHHEE.. CS
        Dcc1 213 vlkvygkke 221
                 v++++ ++ 
  KHJ32183.1 114 VMDRFESQF 122
                 999888765 PP

>> BNIP2  Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   4.1e-05      0.11       9      92 ..      62     186 ..      37     206 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 4.1e-05
       BNIP2   9 klslsldqsesdsdlsqflasvtp.......................ddissledsldinvDdl.................etpsdedslevpetlkdl 67 
                 +l+l++ +s  d+++s ++++vt                        d is++ d+++ ++Ddl                  tp+d+ +  + +  +++
  KHJ32183.1  62 RLNLLRLASRIDAVASRVQTAVTMrqvtgsmtnvvkgmdqamksmdlDKISTVMDRFESQFDDLdvatgyyenattsatavATPQDDVDRLINQVADEA 160
                 68899999999999999999999999999999999999999999999*****************99999999999999999777776555556566666 PP

       BNIP2  68 eweddlp.akeaeaasesaeslpqys 92 
                  +e + +   +++++s++a++  +  
  KHJ32183.1 161 GVELHQEmDVAQAVTSAPAKNSLAEV 186
                 55555552223444444444443333 PP

>> DUF1843  Domain of unknown function (DUF1843)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   1.9     0.032        81      31      49 ..      31      49 ..      15      50 .. 0.76
   2 ?    6.4   0.0    0.0052        13       7      35 ..      99     127 ..      97     137 .. 0.86
   3 ?    0.7   0.1       0.3   7.7e+02      21      41 ..     155     175 ..     140     186 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.032
     DUF1843 31 aeygdiasaleqLkaEIAK 49
                 e++++++a+++ + EIAK
  KHJ32183.1 31 VEKDKLKKAIQAGHSEIAK 49
                37899*************9 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0052
     DUF1843   7 iqqAiasGDLakMKalaaqaeqqLaeygd 35 
                 ++qA +s DL+k  +++ + e+q ++ + 
  KHJ32183.1  99 MDQAMKSMDLDKISTVMDRFESQFDDLDV 127
                 89********************9998765 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.3
     DUF1843  21 alaaqaeqqLaeygdiasale 41 
                 ++a +a   L ++ d+a+a+ 
  KHJ32183.1 155 QVADEAGVELHQEMDVAQAVT 175
                 677888888888888888875 PP

>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.7    0.0003      0.78      30      73 ..       9      52 ..       2      70 .. 0.83
   2 ?   -0.7   0.1      0.85   2.2e+03      35      48 ..      84      97 ..      56     126 .. 0.55
   3 ?    2.0   0.3      0.12   3.2e+02      16      36 ..     140     160 ..     133     207 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.0003
  HIP1_clath_bdg 30 keleeelerlkeeaerkleeqkeelekLkreleakraelarlks 73
                     +l+++ ++l+++a + +++ k e +kLk+ ++a + e+a++ +
      KHJ32183.1  9 FNLKFTAKQLNRQAAKATKDEKVEKDKLKKAIQAGHSEIAKIYA 52
                    5799999********************************99754 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.85
  HIP1_clath_bdg 35 elerlkeeaerkle 48
                    ++++++ + ++ ++
      KHJ32183.1 84 TMRQVTGSMTNVVK 97
                    33333332222222 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.12
  HIP1_clath_bdg  16 svarqaqeeverekkeleeel 36 
                     ++    q++v+r  +++++e 
      KHJ32183.1 140 TAVATPQDDVDRLINQVADEA 160
                     555666777777777777663 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2091  (0.116627); expected 358.6 (0.02)
Passed bias filter:                      687  (0.0383178); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 1601.58
//
Query:       KHJ32184.1  [L=661]
Description: putative ankyrin repeat and zinc finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-63  212.0   0.0    5.7e-63  211.2   0.0    1.4  1  bVLRF1     bacteroidetes VLRF1 release factor
     0.0009   18.1  13.1     0.0017   17.2  13.1    1.5  1  Caldesmon  Caldesmon
  ------ inclusion threshold ------
      0.021   15.2   0.4       0.06   13.8   0.4    1.8  1  Ank        Ankyrin repeat


Domain annotation for each model (and alignments):
>> bVLRF1  bacteroidetes VLRF1 release factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  211.2   0.0   9.6e-67   5.7e-63       2     148 ..     240     397 ..     239     398 .. 0.98

  Alignments for each domain:
  == domain 1  score: 211.2 bits;  conditional E-value: 9.6e-67
      bVLRF1   2 vllmlggGhfAgavvslkkkk..........eaevlahktfhrYttRrkqGgsQsandkakgkaksaGaslRryneqalkedirellkewkeeieksel 90 
                 +l+m+ggGhfAg+vvsl +k+          + ++lahktfhrYttRrkqGg+Qsand+akg+a+saGaslRryneqal +++r ll+ewk +i++s+l
  KHJ32184.1 240 FLCMIGGGHFAGMVVSLIPKQnghssivgtkDITILAHKTFHRYTTRRKQGGAQSANDSAKGAAHSAGASLRRYNEQALMDEVRLLLQEWKCMIDSSDL 338
                 79****************999*********99******************************************************************* PP

      bVLRF1  91 ifirasgksnrkilfg.yeeavlkkkdprlrsiPfttrrptlselkrvleeltrvkvse 148
                 +fira+g++nr+ilfg y+++vl+++dpr+r +Pf+trrpt++el+r++ elt++k++e
  KHJ32184.1 339 LFIRATGSTNRRILFGpYNDQVLRQNDPRVRGFPFNTRRPTQKELTRCFLELTQTKIVE 397
                 ****************9**************************************9975 PP

>> Caldesmon  Caldesmon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2  13.1   2.8e-07    0.0017     233     336 ..     544     656 ..     375     660 .. 0.72

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2.8e-07
   Caldesmon 233 n............aedeedeeakleaekkleelkrrrdekeseefeklrqkqqeaeveleelkkkreerrkvreeeekkrkqeeaerkvreeeekrkmk 319
                 +              ++  e a++e +k  ee  r+ + + + e+e+l+    + ++e   l k+  + r  +  + +k  qe++e ++r      +mk
  KHJ32184.1 544 EnhwdwkqagvpnGISR--EDAEVEIKKEREEEERKEQLRRKLELERLKTESSDRSIENVSLGKAAMRGRMATLGKVQKTAQEKREDEARGLTPEMRMK 640
                 13445555555333333..44555555666888899999999********************************************************* PP

   Caldesmon 320 eeiErRRaEAaEkrqkv 336
                  + Er Ra AaE r+k 
  KHJ32184.1 641 LDRER-RARAAEERMKK 656
                 ****8.9*******996 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.4     1e-05      0.06       4      31 ..     487     516 ..     486     517 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1e-05
                 BHHHHHHHHTT.HHHHHHHHTT.TSTTCBT CS
         Ank   4 TPLHlAatngk.kriiklLLhG.Anlnald 31 
                 TPL lAa+ ++ + i+ lLL+G An++a++
  KHJ32184.1 487 TPLLLAAHLNSvPLITGLLLKGkANPAARN 516
                 9******9999899999***999*****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (661 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1115  (0.0621897); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.39
# Mc/sec: 5146.63
//
Query:       KHJ32185.1  [L=130]
Description: putative apoptosis-inducing taf9-like domain 1 family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.9e-23   80.6   0.0    1.3e-22   80.0   0.0    1.3  1  CENP-S    CENP-S protein
    0.00026   21.1   0.0     0.0003   20.9   0.0    1.4  1  CENP-T_C  Centromere kinetochore component CENP-T histone fol
  ------ inclusion threshold ------
       0.01   15.8   0.0      0.017   15.1   0.0    1.3  1  Bromo_TP  Bromodomain associated


Domain annotation for each model (and alignments):
>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.0   0.0   2.1e-26   1.3e-22       1      65 [.      10      80 ..      10      82 .. 0.89

  Alignments for each domain:
  == domain 1  score: 80.0 bits;  conditional E-value: 2.1e-26
      CENP-S  1 erLKaalwysvgkiveeeaa......ekeveatkqfiaaltelvykqlenlakDLeaFakHAkRstittdD 65
                e+LKa+lw+ +g +v+ e++      +  ++at+qfi++lte+v++q+en+a DLeaFa+HA+R+t+ tdD
  KHJ32185.1 10 EQLKASLWHKIGTLVTSETKnlsiqyDMPIKATPQFIGSLTEMVWAQIENVAMDLEAFANHAGRTTVGTDD 80
                69***********998887734454455556***************************************9 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0     5e-08    0.0003      37      69 ..      48      80 ..      22     122 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 5e-08
    CENP-T_C 37 alekasdkffeqvgeDLeayakHagRKtidesD 69
                +l+++    +e v+ DLea+a+HagR t+ ++D
  KHJ32185.1 48 SLTEMVWAQIENVAMDLEAFANHAGRTTVGTDD 80
                55555556678999***************9988 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0   2.9e-06     0.017      25      63 ..      42      80 ..      38      84 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.9e-06
                -HHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-SS--HHH CS
    Bromo_TP 25 eesaLEtLteiaqkYirelgeqaksfaehagRseptlkD 63
                ++  + +Lte++   i++++ + ++fa+hagR+++   D
  KHJ32185.1 42 TPQFIGSLTEMVWAQIENVAMDLEAFANHAGRTTVGTDD 80
                5677889**************************987666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       663  (0.0369792); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.61
# Mc/sec: 639.77
//
Query:       KHJ32186.1  [L=253]
Description: putative c2h2 type zinc finger domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-10   39.9  15.2    1.2e-09   38.2   4.3    3.3  3  zf-H2C2_2     Zinc-finger double domain
    4.9e-08   33.0  13.3    0.00012   22.4   1.2    2.6  2  zf-C2H2       Zinc finger, C2H2 type
      1e-07   32.1  11.2    0.00095   19.8   0.7    2.7  2  zf-C2H2_4     C2H2-type zinc finger
     0.0001   22.2   0.1     0.0001   22.2   0.1    2.5  2  zf-C2H2_6     C2H2-type zinc finger
    0.00011   22.0   7.9       0.09   12.7   0.1    2.4  2  zf-C2HC_2     zinc-finger of a C2HC-type
     0.0039   17.4   5.7       0.16   12.3   2.9    2.5  2  zf-C2H2_jaz   Zinc-finger double-stranded RNA-binding
     0.0051   17.1   5.0       0.26   11.7   1.6    2.5  2  zf-met        Zinc-finger of C2H2 type
  ------ inclusion threshold ------
      0.033   14.8   0.7       0.92   10.2   0.1    2.6  2  zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
      0.051   13.4   0.5      0.051   13.4   0.5    2.1  2  zf-C2H2_11    zinc-finger C2H2-type
      0.058   13.7   3.7       0.25   11.6   3.8    1.9  1  zf-Di19       Drought induced 19 protein (Di19), zinc-binding
      0.084   12.7   1.3       0.17   11.7   0.6    1.9  2  GAGA          GAGA factor
      0.087   12.3   0.7       0.19   11.2   0.7    1.6  1  zf-Paramyx-P  Zinc-binding domain of Paramyxoviridae V protei
        0.1   13.2   0.4        0.1   13.2   0.4    2.2  2  APC_u14       Unstructured region on APC between SAMP and APC
       0.29   11.2   4.4        7.4    6.7   0.9    2.5  2  zf-BED        BED zinc finger
       0.45   10.9   3.8        4.4    7.7   1.0    2.6  2  zf-C2H2_2     C2H2 type zinc-finger (2 copies)


Domain annotation for each model (and alignments):
>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.5     0.014        17      16      25 ..      26      35 ..       5      36 .. 0.84
   2 !   38.2   4.3   9.8e-13   1.2e-09       1      25 [.      39      63 ..      39      64 .. 0.96
   3 ?    2.1   0.1      0.25     3e+02       2      10 ..      68      76 ..      68      83 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.014
   zf-H2C2_2 16 eCplCdkaFk 25
                +C +Cd +F+
  KHJ32186.1 26 QCRFCDRKFS 35
                9********7 PP

  == domain 2  score: 38.2 bits;  conditional E-value: 9.8e-13
   zf-H2C2_2  1 nLrrHirkHtgekpyeCplCdkaFk 25
                +L+rH r+Htge+py+Cp+C k+F+
  KHJ32186.1 39 HLKRHERSHTGERPYTCPKCLKSFS 63
                79**********************8 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.25
   zf-H2C2_2  2 LrrHirkHt 10
                L rH+++H+
  KHJ32186.1 68 LIRHLKNHP 76
                679*****7 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   5.0   1.7e-05      0.02       2      23 .]      26      47 ..      25      47 .. 0.97
   2 !   22.4   1.2   9.8e-08   0.00012       1      23 []      53      75 ..      53      75 .. 0.98

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.7e-05
                EETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2  2 kCpdCgksFkrksnLkrHirtH 23
                +C  C+++F+  ++LkrH r+H
  KHJ32186.1 26 QCRFCDRKFSKVEHLKRHERSH 47
                7********************9 PP

  == domain 2  score: 22.4 bits;  conditional E-value: 9.8e-08
                EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCpdCgksFkrksnLkrHirtH 23
                y+Cp+C ksF+r++ L rH++ H
  KHJ32186.1 53 YTCPKCLKSFSRSDVLIRHLKNH 75
                9********************99 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   4.1   1.1e-05     0.014       2      23 ..      26      47 ..      25      48 .. 0.94
   2 !   19.8   0.7   7.9e-07   0.00095       1      23 [.      53      75 ..      53      76 .. 0.94

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.1e-05
   zf-C2H2_4  2 kCpiCgksFsskkaLlrHlkth 23
                +C++C++ Fs  ++L+rH ++h
  KHJ32186.1 26 QCRFCDRKFSKVEHLKRHERSH 47
                8********99999******99 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 7.9e-07
   zf-C2H2_4  1 fkCpiCgksFsskkaLlrHlkth 23
                ++Cp C ksFs+++ L rHlk+h
  KHJ32186.1 53 YTCPKCLKSFSRSDVLIRHLKNH 75
                89********99999*******9 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   4.1       3.7   4.5e+03       7      23 ..      30      46 ..      26      49 .. 0.55
   2 !   22.2   0.1   8.6e-08    0.0001       2      25 ..      53      76 ..      53      77 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 3.7
   zf-C2H2_6  7 CsksFpslqaLggHkks 23
                C++ F++   L  H +s
  KHJ32186.1 30 CDRKFSKVEHLKRHERS 46
                55555555555555555 PP

  == domain 2  score: 22.2 bits;  conditional E-value: 8.6e-08
   zf-C2H2_6  2 heCsvCsksFpslqaLggHkksHr 25
                + C+ C+ksF+  + L+ H+k+H 
  KHJ32186.1 53 YTCPKCLKSFSRSDVLIRHLKNHP 76
                88*********************7 PP

>> zf-C2HC_2  zinc-finger of a C2HC-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   3.3   0.00018      0.21       4      22 ..      26      45 ..      25      46 .. 0.93
   2 !   12.7   0.1   7.5e-05      0.09       4      22 ..      54      73 ..      53      74 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00018
   zf-C2HC_2  4 pCpkCgRsF.npdrlekHep 22
                +C++C R+F +++ l +He+
  KHJ32186.1 26 QCRFCDRKFsKVEHLKRHER 45
                9*****************98 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 7.5e-05
   zf-C2HC_2  4 pCpkCgRsF.npdrlekHep 22
                 CpkC  sF  +d l +H +
  KHJ32186.1 54 TCPKCLKSFsRSDVLIRHLK 73
                6*****************86 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   2.9   0.00013      0.16       4      24 ..      27      47 ..      26      47 .. 0.96
   2 ?    5.4   0.0      0.02        24       2      24 ..      53      75 ..      52      76 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00013
                 BTTTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz  4 CvlCdKyFksenaldnHlkSK 24
                 C  Cd+ F++ + l+ H++S+
   KHJ32186.1 27 CRFCDRKFSKVEHLKRHERSH 47
                 899****************97 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.02
                 CBBTTTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHlkSK 24
                 + C+ C K F+ + +l  Hlk +
   KHJ32186.1 53 YTCPKCLKSFSRSDVLIRHLKNH 75
                 6799999*************976 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   1.6   0.00022      0.26       2      23 ..      26      47 ..      25      48 .. 0.94
   2 ?    6.3   0.1     0.011        13       1      21 [.      53      73 ..      53      73 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00022
      zf-met  2 yCelCnvtfnsesqlksHlqGK 23
                +C  C+++f+   +lk H +++
  KHJ32186.1 26 QCRFCDRKFSKVEHLKRHERSH 47
                6*******************98 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.011
      zf-met  1 fyCelCnvtfnsesqlksHlq 21
                ++C+ C ++f+   +l+ Hl+
  KHJ32186.1 53 YTCPKCLKSFSRSDVLIRHLK 73
                78999**************96 PP

>> zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.1   0.00077      0.92      90     122 ..      13      45 ..       4      48 .. 0.79
   2 ?    1.6   0.0      0.36   4.3e+02       1      21 [.      55      75 ..      55      83 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00077
  zf-C2H2_3rep  90 ennsenesgvrkfvcrfcGlkfdllpdlGrhhq 122
                   +++ +++s++    crfc  kf  +  l rh +
    KHJ32186.1  13 KTKPKSSSATASKQCRFCDRKFSKVEHLKRHER 45 
                   45666777778889****************976 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.36
  zf-C2H2_3rep  1 caicldsftnkkvlethvqer 21
                  c  cl sf+   vl  h+++ 
    KHJ32186.1 55 CPKCLKSFSRSDVLIRHLKNH 75
                  778***********9998865 PP

>> zf-C2H2_11  zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.5   4.2e-05     0.051       3      23 ..      23      43 ..      21      45 .. 0.92
   2 ?   -0.1   0.4      0.66   7.9e+02       7      24 ..      55      72 ..      53      73 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.2e-05
  zf-C2H2_11  3 stcqCleCGlcftSqlsLsRH 23
                ++ qC+ C ++f+    L+RH
  KHJ32186.1 23 ASKQCRFCDRKFSKVEHLKRH 43
                799****************** PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.66
  zf-C2H2_11  7 CleCGlcftSqlsLsRHl 24
                C +C   f+ +  L RHl
  KHJ32186.1 55 CPKCLKSFSRSDVLIRHL 72
                888988999999999998 PP

>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   3.8   0.00021      0.25       4      50 ..      26      73 ..      23      77 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00021
     zf-Di19  4 tCPyCgkeltvkeLveHvedeHrveskevvCPvCaekvtk..dlvaHlt 50
                +C +C ++++++e ++  e  H+ e+ ++ CP C +  ++   l++Hl+
  KHJ32186.1 26 QCRFCDRKFSKVEHLKRHERSHTGER-PYTCPKCLKSFSRsdVLIRHLK 73
                799*****999988888899999875.689****988654326888986 PP

>> GAGA  GAGA factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1       1.8   2.2e+03      14      43 ..      13      43 ..       9      44 .. 0.53
   2 ?   11.7   0.6   0.00014      0.17      13      44 ..      40      72 ..      25      75 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.8
                --CCCCTTS--.EE-TTT--EESSHHHHHHH CS
        GAGA 14 kiksksqsEqP.AtCPiCqAviRqsRnLRRH 43
                k k ks s      C  C     +   L+RH
  KHJ32186.1 13 KTKPKSSSATAsKQCRFCDRKFSKVEHLKRH 43
                4555555543303466666655555556665 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00014
                ---CCCCT.TS--EE-TTT--EESSHHHHHHHH CS
        GAGA 13 lkiksksq.sEqPAtCPiCqAviRqsRnLRRHL 44
                lk +++s   E P tCP C      s  L RHL
  KHJ32186.1 40 LKRHERSHtGERPYTCPKCLKSFSRSDVLIRHL 72
                45566665259*********************9 PP

>> zf-Paramyx-P  Zinc-binding domain of Paramyxoviridae V protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.7   0.00016      0.19      13      43 ..      28      58 ..      22      60 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00016
  zf-Paramyx-P 13 ewCNPmcSpitaepkreeCvCGecPreCeqC 43
                  ++C    S++    ++e+   Ge P +C++C
    KHJ32186.1 28 RFCDRKFSKVEHLKRHERSHTGERPYTCPKC 58
                  89***************************** PP

>> APC_u14  Unstructured region on APC between SAMP and APC_crr
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.4   8.5e-05       0.1      33      79 ..       2      48 ..       1      62 [. 0.92
   2 ?   -2.7   0.0       7.7   9.2e+03      76      88 ..     123     135 ..     118     139 .. 0.54

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 8.5e-05
     APC_u14 33 PmPqsseyraRlrknaesknnlseersysdnkeakkqnlknasrdfn 79
                P+Pq+ +y+    k + s  + s++  + d k +k ++lk + r  +
  KHJ32186.1  2 PLPQNPDYKVAKTKPKSSSATASKQCRFCDRKFSKVEHLKRHERSHT 48
                9***************************************9998765 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 7.7
     APC_u14  76 rdfndklpnneeR 88 
                  +++ k +++e+R
  KHJ32186.1 123 TEYSSKSKQDENR 135
                 4444444444444 PP

>> zf-BED  BED zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.6     0.021        26      18      38 ..      26      43 ..      21      48 .. 0.89
   2 ?    6.7   0.9    0.0062       7.4      18      40 ..      54      73 ..      40      77 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.021
                EETTTTEE----SSTHHHHHH CS
      zf-BED 18 vCryCgkilsrgggttnLkrH 38
                +Cr+C +++s    + +LkrH
  KHJ32186.1 26 QCRFCDRKFSK---VEHLKRH 43
                7*********9...6999999 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0062
                EETTTTEE----SSTHHHHHHHH CS
      zf-BED 18 vCryCgkilsrgggttnLkrHLr 40
                +C  C k +sr+     L+rHL+
  KHJ32186.1 54 TCPKCLKSFSRS---DVLIRHLK 73
                8**********9...55666653 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   1.0    0.0037       4.4      51      72 ..      25      46 ..      14      53 .. 0.79
   2 ?    3.4   0.1     0.083        99      51      78 ..      53      78 ..      45      97 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0037
   zf-C2H2_2 51 leClyCekefkslealreHmkk 72
                 +C +C+++f+++e+l+ H ++
  KHJ32186.1 25 KQCRFCDRKFSKVEHLKRHERS 46
                6899998888899998888655 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.083
   zf-C2H2_2 51 leClyCekefkslealreHmkkkgHcki 78
                ++C  C k+f+  + l  H+k  +H ++
  KHJ32186.1 53 YTCPKCLKSFSRSDVLIRHLK--NHPRL 78
                689999999999999999986..45555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1085  (0.0605165); expected 358.6 (0.02)
Passed bias filter:                      649  (0.0361983); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 1739.01
//
Query:       KHJ32187.1  [L=244]
Description: putative caleosin domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-76  255.6   1.2    2.6e-76  255.3   1.2    1.1  1  Caleosin  Caleosin related protein


Domain annotation for each model (and alignments):
>> Caleosin  Caleosin related protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.3   1.2   1.4e-80   2.6e-76       2     169 ..      67     234 ..      66     235 .. 0.99

  Alignments for each domain:
  == domain 1  score: 255.3 bits;  conditional E-value: 1.4e-80
    Caleosin   2 eetvLqqHvaFfDrdkdGiiypldtyrgfralgfnvllsllaalvihlalsyptlpswlpdplfriyvknihkakhgSdsgaYdeeGrfvpqkfeeifs 100
                 ++tvLqqH+aFfD+d+dG+i+pldt++gfr++g+++++s++++++ih+++sypt+++ lpdp+fri v++ihk+khgSdsg++d eGrf pq+fe+if+
  KHJ32187.1  67 HQTVLQQHIAFFDHDNDGTIWPLDTFHGFRDIGYSLAFSIFSMFIIHANFSYPTVSGILPDPFFRIFVARIHKDKHGSDSGSFDPEGRFQPQQFEDIFA 165
                 79************************************************************************************************* PP

    Caleosin 101 kyakekkdaltlkevlellkgqrealDlfgwlaallewlalylllkdkdgllkkedvrgvydGslFyki 169
                 kya+ +k+++t+ e+ ++++g+r ++D+fg++aa++ewla+y+ll+++dg++kked+rgvydGslFy+i
  KHJ32187.1 166 KYASGDKQGITFIEICKYINGRRVVFDFFGFFAAVFEWLATYILLWPADGRMKKEDIRGVYDGSLFYEI 234
                 *******************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1709.83
//
Query:       KHJ32188.1  [L=531]
Description: putative flocculation suppression protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-30  106.0   0.5    4.2e-30  104.2   0.5    2.0  1  HSF_DNA-bind  HSF-type DNA-binding
  ------ inclusion threshold ------
      0.015   15.7   0.0      0.041   14.3   0.0    1.7  1  Ets           Ets-domain


Domain annotation for each model (and alignments):
>> HSF_DNA-bind  HSF-type DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.2   0.5   4.7e-34   4.2e-30       1      96 []      65     164 ..      65     164 .. 0.97

  Alignments for each domain:
  == domain 1  score: 104.2 bits;  conditional E-value: 4.7e-34
                   HHHHHHHHHCT...TTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTB--TTSEEEEE..SS--XXXXXXXXX CS
  HSF_DNA-bind   1 FlkkLyklled...eelisWsedgksfvvkdkeefakevlpkyfkhsnfssFvrqLnlYgFrkvkrkeekkkkkskvweFsh..enFkrgkpelLkk 92 
                   F++kLy++led   ++li+Wse+++sfv++++++fak vl++yfkh+n+ssFvrqLn+YgF+kv++  ++ + +s  weF+h  +nFkrg+   L++
    KHJ32188.1  65 FIHKLYNMLEDpsmQHLITWSETEDSFVMSPSNDFAK-VLSQYFKHTNISSFVRQLNMYGFHKVSDVFQTGSPESPLWEFKHgnGNFKRGDLIGLRE 160
                   9********99999999*******************9.9*******************************************999************ PP

                   XXXX CS
  HSF_DNA-bind  93 ikrk 96 
                   ikr+
    KHJ32188.1 161 IKRR 164
                   **97 PP

>> Ets  Ets-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   4.6e-06     0.041       6      59 ..      69     119 ..      64     131 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 4.6e-06
         Ets   6 llelLedpskssiiaWtdkeegeFklvdpeevarlWgkrknkpkmnyeklsral 59 
                 l+++Ledps++++i+W +  e +F ++ ++ +a+  +++ +++  n+ ++ r+l
  KHJ32188.1  69 LYNMLEDPSMQHLITWSET-EDSFVMSPSNDFAKVLSQYFKHT--NISSFVRQL 119
                 6789************977.99**********99988776554..444455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 3962.90
//
Query:       KHJ32189.1  [L=135]
Description: putative histone chaperone domain chz [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-16   60.0   3.4    1.1e-16   60.0   3.4    2.2  3  CHZ          Histone chaperone domain CHZ
  ------ inclusion threshold ------
        2.6    8.1  10.4        2.4    8.2   1.0    2.2  2  Phage_Gp17   Gene Product 17
        9.2    5.5  16.2        9.4    5.5  16.2    1.0  1  BUD22        BUD22


Domain annotation for each model (and alignments):
>> CHZ  Histone chaperone domain CHZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   3.4   1.8e-20   1.1e-16       1      34 []      77     110 ..      77     110 .. 0.97
   2 ?   -6.5   4.4         3   1.8e+04       1       3 [.     120     122 ..     116     126 .. 0.54
   3 ?   -3.4   0.9       1.2   6.9e+03       1       8 [.     128     135 .]     128     135 .] 0.79

  Alignments for each domain:
  == domain 1  score: 60.0 bits;  conditional E-value: 1.8e-20
         CHZ   1 eeedeLeEIDtsNIIsgGRRTRgktiDfakaaek 34 
                 +eed +eEID+ NIIsg RRTRg++iDfakaa++
  KHJ32189.1  77 DEEDTMEEIDPQNIISGERRTRGRNIDFAKAAKE 110
                 69******************************96 PP

  == domain 2  score: -6.5 bits;  conditional E-value: 3
         CHZ   1 eee 3  
                 ee+
  KHJ32189.1 120 EED 122
                 344 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 1.2
         CHZ   1 eeedeLeE 8  
                 +e++e+ E
  KHJ32189.1 128 VEDEEMKE 135
                 58999987 PP

>> Phage_Gp17  Gene Product 17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   1.0    0.0004       2.4      59      99 ..      42      82 ..      36      93 .. 0.89
   2 ?    4.7   2.7    0.0048        29      66      85 ..     107     126 ..      99     133 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0004
  Phage_Gp17 59 krvllevtveelgtqdndeddeledldgeidrvdyidkdgi 99
                k vl+e t +++  +d +   e e  +g id vd  + d +
  KHJ32189.1 42 KGVLMESTHQDISMDDAESSSEDEAAEGGIDVVDPDEEDTM 82
                789*******************************8877765 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0048
  Phage_Gp17  66 tveelgtqdndeddeledld 85 
                 + +elg +d+ded+e ed++
  KHJ32189.1 107 AAKELGPDDEDEDEEDEDFE 126
                 5689***********99976 PP

>> BUD22  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5  16.2    0.0016       9.4     122     242 ..       8     126 ..       1     135 [] 0.53

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0016
       BUD22 122 evveeivesvkkllgiekkkkkkeeekkkkkkkkkkkkkkeeeeeeesdkeeesedsedeekeeseddeeeeeededdedaee.........deedeea 211
                 ++v   +++ +k+++i++  ++++ +  ++  ++k k+   e+ +++ ++++++++sed     ++++   +  d d+ed++e          e+ +  
  KHJ32189.1   8 SEVTPEIQDGEKVANIPV--EASAGATVETPVQDKGKGVLMESTHQDISMDDAESSSED-----EAAEGGIDVVDPDEEDTMEeidpqniisGERRTRG 99 
                 444444555577777777..444444444444555555555555555666666666666.....22222222222222222223344566666677889 PP

       BUD22 212 eerelaqydgllasddededeyneetdeess 242
                 ++ ++a+  + l+ ddeded    e+de+ +
  KHJ32189.1 100 RNIDFAKAAKELGPDDEDED----EEDEDFE 126
                 999*****999999999999....2333222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       523  (0.0291706); expected 358.6 (0.02)
Passed bias filter:                      246  (0.0137208); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 991.48
//
Query:       KHJ32190.1  [L=1149]
Description: putative calcium permease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-18   66.3  38.7    3.2e-12   46.6  16.5    3.7  5  Na_Ca_ex  Sodium/calcium exchanger protein
    1.3e-14   54.6  17.2    1.3e-14   54.6  17.2    4.9  7  YccF      Inner membrane component domain


Domain annotation for each model (and alignments):
>> Na_Ca_ex  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   1.8       1.1   9.9e+03      67      79 ..     315     327 ..     295     348 .. 0.54
   2 ?   -4.3   1.3       1.7   1.6e+04      80      82 ..     466     468 ..     446     488 .. 0.51
   3 ?   -3.2   0.3      0.79   7.1e+03     100     121 ..     533     555 ..     515     562 .. 0.63
   4 !   35.0  14.2   1.4e-12   1.3e-08       2     148 ..     572     758 ..     571     761 .. 0.81
   5 !   46.6  16.5   3.6e-16   3.2e-12       4     149 ..     969    1119 ..     966    1121 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHH CS
    Na_Ca_ex  67 aignvlGsnifnl 79 
                 a+ +++G+++  +
  KHJ32190.1 315 ALVTLIGAVVCFI 327
                 2223333333333 PP

  == domain 2  score: -4.3 bits;  conditional E-value: 1.7
                 HTH CS
    Na_Ca_ex  80 llv 82 
                  +v
  KHJ32190.1 466 IIV 468
                 222 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 0.79
                 CHHH.HHHHHHHHHHHHHHHHTC CS
    Na_Ca_ex 100 kldl.gllllvallllllvllll 121
                 ++d  +++l+ ++ ++l+v++ +
  KHJ32190.1 533 TIDGtNIFLINLMGVVLFVIFDY 555
                 45555666666666666665544 PP

  == domain 4  score: 35.0 bits;  conditional E-value: 1.4e-12
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCECC CS
    Na_Ca_ex   2 lfvlfilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigslkvdseslk 100
                  ++lfi++ll +++la f+ +++++i+     s   +G  ++A++++l E+++  +a+ +g++ l+ g+v+Gs+++ +l+  Gl++++g+  +++ +  
  KHJ32190.1 572 PAFLFIAALLSVIPLAYFIGQAVASIS---AQSSMGIGAAINAFFSTLVEVFLYCVALNQGKGKLVEGSVIGSIFAGVLFLPGLSMCFGA-IKRKTQ-R 665
                 5789***********************...889999****************************************************88.444444.7 PP

                 HHH.HHHHHHHHHHHHHHHHTCHHHHH.............................................HTEEHHHHHHHHHHHHHHHHHH CS
    Na_Ca_ex 101 ldl.gllllvallllllvlllllplfv.............................................pgrltvleglvllllYalylvl 148
                 ++  ++  + ++ll+++v+++  p+ +                                              +  t++ +++l+l Y++ l++
  KHJ32190.1 666 FNAkSASATSTMLLFAVVAAFG-PTLFyqiygthelnciectetdttkvsrdcrrcyysqtpsldnhfflhvVRPYTWVAAALLFLSYIIGLWF 758
                 7776788888888888777765.65556778877777777777777777777777777777777777777777777777777777777776666 PP

  == domain 5  score: 46.6 bits;  conditional E-value: 3.6e-16
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHH......BTT CS
    Na_Ca_ex    4 vlfilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigs......lkv 94  
                  +++ l+++l +++a++lv +++++ k + is+++lG+tl+Al+ + +E++ +i++a++g++ l++    + ++++ ll i+  +l+++      +  
  KHJ32190.1  969 IVLCLATILYALIAEVLVGTVDVVLKNVSISEKFLGVTLFALVPNTTEFLNAISFAMNGNIALSMEIGSAYVLQVYLLQIPALVLYSAiygqylVNT 1065
                  68999*********************************************************************************99888876666 PP

                  SSCECCHHH..HHHHHHHHHHHHHHHHTCHHHHHHTEEHHHHHHHHHHHHHHHHHHH CS
    Na_Ca_ex   95 dseslkldl..gllllvallllllvlllllplfvpgrltvleglvllllYalylvls 149 
                  ds s +++l  + + +++l l++++l ++    ++g+ ++++g +lll Y+++++ +
  KHJ32190.1 1066 DSMSHTFSLifPQWDMITLTLCVFLLSYV---YGEGKSNYFKGSILLLSYLVIIIGF 1119
                  66665555533555555555555444444...448*****************98765 PP

>> YccF  Inner membrane component domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.6  17.2   1.5e-18   1.3e-14       1      51 []     301     354 ..     301     354 .. 0.97
   2 ?    0.7   8.2     0.099   8.8e+02       4      39 ..     452     486 ..     440     492 .. 0.85
   3 ?   -3.4   0.6       1.9   1.7e+04      14      27 ..     539     552 ..     536     559 .. 0.55
   4 ?   -3.2   0.3       1.6   1.5e+04      13      30 ..     574     591 ..     568     601 .. 0.74
   5 ?   -3.1   0.7       1.5   1.4e+04      18      32 ..     742     756 ..     740     762 .. 0.56
   6 ?   -2.8   0.3       1.3   1.1e+04      13      28 ..     970     985 ..     968     996 .. 0.54
   7 ?   -2.9   0.8       1.3   1.2e+04       7      15 ..    1114    1122 ..    1105    1124 .. 0.75

  Alignments for each domain:
  == domain 1  score: 54.6 bits;  conditional E-value: 1.5e-18
        YccF   1 lgNilWlllfGwwlaliyllaglllfitii...gipygrvlfklakyllwPFGk 51 
                 ++NilW+l fGwwlal++l++++++fi+     ++ ygrvl++l++yl++PFGk
  KHJ32190.1 301 CFNILWTLWFGWWLALVTLIGAVVCFIFGAapsALLYGRVLWGLSGYLFYPFGK 354
                 58**************************88***********************8 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.099
        YccF   4 ilWlllfGwwlaliyllaglllfitiigipygrvlf 39 
                 i+ l++ G+++ l+ +++g+++f++ + ip+g+v +
  KHJ32190.1 452 IFFLFFYGLITPLLIIVSGICWFLV-FWIPMGKVTL 486
                 4556668999999999999999977.99****9876 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 1.9
        YccF  14 laliyllaglllfi 27 
                 ++li l++ +l+ i
  KHJ32190.1 539 IFLINLMGVVLFVI 552
                 44454444444444 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 1.6
        YccF  13 wlaliyllaglllfitii 30 
                 +l+++ ll+ + l+ +i+
  KHJ32190.1 574 FLFIAALLSVIPLAYFIG 591
                 678888888888777765 PP

  == domain 5  score: -3.1 bits;  conditional E-value: 1.5
        YccF  18 yllaglllfitiigi 32 
                 ++ a+ll++  iig+
  KHJ32190.1 742 WVAAALLFLSYIIGL 756
                 455555555555554 PP

  == domain 6  score: -2.8 bits;  conditional E-value: 1.3
        YccF  13 wlaliyllaglllfit 28 
                 +l+l+++l +l+  ++
  KHJ32190.1 970 VLCLATILYALIAEVL 985
                 4455555555554444 PP

  == domain 7  score: -2.9 bits;  conditional E-value: 1.3
        YccF    7 lllfGwwla 15  
                  +++ G+wla
  KHJ32190.1 1114 VIIIGFWLA 1122
                  466788886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       991  (0.0552736); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.81u 0.29s 00:00:01.10 Elapsed: 00:00:00.43
# Mc/sec: 8004.91
//
Query:       KHJ32191.1  [L=200]
Description: hypothetical protein EV44_g0178 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   12.4   1.7       0.24   11.4   1.7    1.5  1  DUF2556   Protein of unknown function (DUF2556)


Domain annotation for each model (and alignments):
>> DUF2556  Protein of unknown function (DUF2556)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.7   1.3e-05      0.24       2      17 ..     178     193 ..     177     195 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.3e-05
     DUF2556   2 iRkYgWLvvFalsill 17 
                 + kY+WL++ al++++
  KHJ32191.1 178 LQKYWWLIAAALMVII 193
                 78**********9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.20s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1608.17
//
Query:       KHJ32192.1  [L=188]
Description: putative protein transport protein bet1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.011   15.5   0.0      0.011   15.5   0.0    1.1  1  Use1      Membrane fusion protein Use1


Domain annotation for each model (and alignments):
>> Use1  Membrane fusion protein Use1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   0.0     6e-07     0.011     144     236 ..      84     180 ..      13     188 .] 0.74

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 6e-07
        Use1 144 k...ksdedldavlkkhenlqEklaeemlsLarnLKenslaasqiikkDtetlsksekaadqnlaslkkeserleeh.skskvkcllwlllfvvlvv 236
                       ++  +a+l   e+  +   e +l+ +r+LK+ + a+++ i++  e  s + +  +    +l  + +r+    +k  v +  wl++f+ +v+
  KHJ32192.1  84 AvpnHRGQYSNAILSSLESQNDSEVEGILGKVRQLKNLTVAIGDEIRESSELASMMNERFEGTRVRLRGNMSRMLVMaQKTGVGWKAWLIFFLAVVL 180
                 1454666677777777777778889999999**************************************9999888558889999999888876554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1444.12
//
Query:       KHJ32193.1  [L=187]
Description: hypothetical protein EV44_g3659 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.086   12.8   0.0       0.11   12.4   0.0    1.1  1  Glyco_hydro_44  Glycoside hydrolase family 44


Domain annotation for each model (and alignments):
>> Glyco_hydro_44  Glycoside hydrolase family 44
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   6.1e-06      0.11      79     140 ..      81     139 ..      64     164 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.1e-06
                     ..EES--SS---SS--SSSSEEEHHH.....HHHHHHHHH--.TSTTS--EEEESS-GGGHHH CS
  Glyco_hydro_44  79 dgvkikktaelsltpdptdtsvyadeeftkewvnhlvkklgs.asatgvkfysLDNEpelWss 140
                     dg+   ++++ ++ pd t+++ ++      ++++ l    gs a+++g  f ++ NE+e+W++
      KHJ32193.1  81 DGTIGMQNSNRIHDPDSTHAKFKSRR----SIIKELRGAQGSeAGDSGALFRKIENEIEVWED 139
                     55444455555666666666666555....9******************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1344.51
//
Query:       KHJ32194.1  [L=244]
Description: putative vesicle-associated membrane protein 712 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-29  101.8   0.0    1.9e-29  101.3   0.0    1.3  1  Synaptobrevin  Synaptobrevin
      3e-23   81.7   0.0    4.8e-23   81.0   0.0    1.3  1  Longin         Regulated-SNARE-like domain


Domain annotation for each model (and alignments):
>> Synaptobrevin  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.3   0.0   2.2e-33   1.9e-29       2      89 .]     147     234 ..     146     234 .. 0.98

  Alignments for each domain:
  == domain 1  score: 101.3 bits;  conditional E-value: 2.2e-33
                    XXHHHHHHHHHHCCCCHHCCHHHHCHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHTXXXXXXXXXXXXXXXXXXXXXXXX CS
  Synaptobrevin   2 ndklakikaevdevkdimkeNidkvlergekldeLvdktenLqssaqqFkkqarklkrkmwwknmkliiililvvlililiiiivicg 89 
                    +d +++++ evd+v++im +Nid++lerge++d+L dkt++L  +a +F+ ++r l+r+mwwkn+kli++li+vvl l ++  +++cg
     KHJ32194.1 147 QDAIQNLQGEVDNVRGIMSQNIDSLLERGERIDLLIDKTDRLGGTAHDFRIRSRGLRRRMWWKNIKLILLLIFVVLTLAYLTTAFACG 234
                    799*********************************************************************************9996 PP

>> Longin  Regulated-SNARE-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.0   0.0   5.3e-27   4.8e-23       2      83 ..      38     129 ..      37     130 .. 0.94

  Alignments for each domain:
  == domain 1  score: 81.0 bits;  conditional E-value: 5.3e-27
      Longin   2 klilkkishsspqkltythdsytfhyla...........edgltylviadesyprrlaFafLeeikreFlakygtaktadaadlrpyafaeFd 83 
                 + il+kish+ pqkltyt +s ++hy+a           +++ltylv+a+ s++rr++F fL ++k++Fl+ y+   t d+a+l++y++ +F+
  KHJ32194.1  38 SVILPKISHNVPQKLTYTLNSKFIHYIAdapsefpsnasAGRLTYLVVAEPSLGRRIPFGFLFDVKKKFLEDYPVLVT-DFASLPHYGAGSFN 129
                 679*****999*******888*******9999999998889*********************************7555.9*********9**9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       824  (0.0459591); expected 358.6 (0.02)
Passed bias filter:                      650  (0.0362541); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 1892.91
//
Query:       KHJ32195.1  [L=384]
Description: putative short chain dehydrogenase reductase family oxidoreductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-16   60.4   0.0    3.4e-15   56.0   0.0    2.5  2  adh_short      short chain dehydrogenase
    2.8e-07   30.4   0.0    1.6e-06   27.8   0.0    2.2  2  adh_short_C2   Enoyl-(Acyl carrier protein) reductase
    4.6e-06   26.3   0.0    1.5e-05   24.6   0.0    1.8  1  Epimerase      NAD dependent epimerase/dehydratase family
     0.0003   20.7   0.0    0.00058   19.8   0.0    1.5  1  KR             KR domain
     0.0012   18.5   0.3     0.0019   17.9   0.3    1.3  1  DUF4126        Domain of unknown function (DUF4126)
  ------ inclusion threshold ------
      0.018   15.0   0.6       0.04   13.9   0.6    1.6  1  CoA_binding_3  CoA-binding domain


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.0   1.1e-18   3.4e-15       1     188 [.      54     273 ..      54     278 .. 0.86
   2 ?   -2.4   0.0      0.94   2.8e+03      35      62 ..     320     343 ..     301     361 .. 0.62

  Alignments for each domain:
  == domain 1  score: 56.0 bits;  conditional E-value: 1.1e-18
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEE.EESCHHH..HHHHHHHHHHT..TSEEEEEE-TTTSHHHHHHHHHHHHHHH..SSESEEEE---S.S--S CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvv.vdrseek..leevakelkee..gakalaiqvDvtdreevealvekavkkl..gkldvLvnNAGi.tgsg 91 
                 kv+++tG++sGIG a+a +la++Ga++++ v + +++  l e ++ ++++  ++ ++a qvD+++   ++++  k ++     +ld+++ +A+  t +g
  KHJ32195.1  54 KVMMITGGTSGIGAALAFRLAQRGAQIILlVHQPPNDvfLIEFIEDMRSKsgNQLIYAEQVDLSSLYGIRKFATKWIDSAppRRLDMIILCAATmTPPG 152
                 799**************************6666555523567778888888444577889**************999999899******9998879999 PP

                 SGGGCSHHHHHHHHHHHTHHHHHHHHHHHHHHH...HCTTEEEEEEE.............EGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGT... CS
   adh_short  92 pfselseeewervievNltgvflltravlpaml...kqssGrIvnvs.............SvagkvpvagvaaYsAsKaavagltrslakelaptg... 171
                 +  +++ee +e++  vN+++ f+l  ++ pa+      +  rI++++             S   k++++   aY  sK a++ ++ +++k la ++   
  KHJ32195.1 153 KPRKVTEEGIEETWMVNYVANFHLLSLLSPAIRaqpPDRDVRIIFITcscyircpplyddSKLRKEKWNPSRAYNQSKLAMNIFALAFQKHLAAYKrpd 251
                 99*****************************88666668899***97666666666666678899999999*****************99998777677 PP

                 .....EEEEEEEESSBSSHHHH CS
   adh_short 172 .....irvnavaPGlvdTdmak 188
                        v++v PG+v+T+ ++
  KHJ32195.1 252 gaptnTHVIVVDPGYVRTPGMR 273
                 777779***********98665 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.94
                 HHHHHHHHHHHHTTSEEEEEE-TTTSHH CS
   adh_short  35 ekleevakelkeegakalaiqvDvtdre 62 
                 ++le+++ke++e    + + + D++d++
  KHJ32195.1 320 STLEKLIKECQE----IGFKRNDINDEA 343
                 456666666665....455555555554 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   5.5e-10   1.6e-06       3     131 ..      62     203 ..      60     279 .. 0.84
   2 ?   -2.6   0.0       1.1   3.2e+03      16      57 ..     302     346 ..     299     358 .. 0.69

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 5.5e-10
                   TTSHHHHHHHHHHHTT-EEEEEESSGGHH....HHHHHHHHHTTSE.E..EE--TTSHHHHHHHHHHHHHHH..SSEEEEEE-----EGCSS-GGGH CS
  adh_short_C2   3 asgIGraiAkalaeeGaevvltdlneeak....krveelaeelgae.v..lecDVtdeeqvealveevvekf..gklDilvnnagiapklkgpflet 90 
                    sgIG+a+A +la++Ga+++l   +  ++    + +e++ ++ g++ +   ++D ++   +++++ +  ++    +lD+++ +a+ +++  g+  ++
    KHJ32195.1  62 TSGIGAALAFRLAQRGAQIILLVHQPPNDvfliEFIEDMRSKSGNQlIyaEQVDLSSLYGIRKFATKWIDSAppRRLDMIILCAATMTP-PGKPRKV 157
                   69******************99999888512236666677777777636799******************99999***********999.8999*** PP

                   -HHHHHHHHHHHTHHHHHHHHHHHHHCTSC.....CEEEEEEEGGG CS
  adh_short_C2  91 sreefdraldvnlyslfllakaalplmkeg.....gsivnlssvga 131
                   ++e+++++  vn  + f+l+  + p+++++      +i+ ++  + 
    KHJ32195.1 158 TEEGIEETWMVNYVANFHLLSLLSPAIRAQppdrdVRIIFITCSCY 203
                   *************************887776766666777665544 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.1
                   HTT-EEEEEESSGGH..HHHHHHHHHHTTSE.EEE--TTSHHHHH CS
  adh_short_C2  16 eeGaevvltdlneea..kkrveelaeelgae.vlecDVtdeeqve 57 
                   e G + +l  + +++  ++++e+l +e+++  + + D++de+  +
    KHJ32195.1 302 EDGIQSILYAVMDAKfgRSTLEKLIKECQEIgFKRNDINDEAIAK 346
                   566665555555555578899999999988767888888887655 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   4.9e-09   1.5e-05       2     158 ..      57     242 ..      56     247 .. 0.75

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 4.9e-09
                 EEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC............EEEE--TT-HH.......HHHHHHHHHT-SEEEE--S---H.... CS
   Epimerase   2 lVtGatGfiGsalvkallekgyevigldrlssasntarledl............elveldltdrs.......alerlfkeeqpdavihlAavggv.... 77 
                 ++tG+t  iG+al+ +l+++g ++i l +++ ++ +  +  +               ++dl           ++ +     + d++i++Aa  ++    
  KHJ32195.1  57 MITGGTSGIGAALAFRLAQRGAQIILLVHQPPNDVFLIEF-IedmrsksgnqliYAEQVDLSSLYgirkfatKWIDSAPPRRLDMIILCAATMTPpgkp 154
                 79****************************6555554443.2588******99944455555544222211123333333599********66552222 PP

                 .HHHHHSHHHHHHHHTHHHHHHHHHHH........HHTCTEEEEEEEGGGGTSCSSSSBSTCSTTS----SSHHHHHHHHHHHHHHHHHH CS
   Epimerase  78 .aassedpadfieknlqgtlnlleaar........kagvkrllflsSsevYGkdaeqpkeettltgplkpnspYaaaKlageklveayaa 158
                  +++ e  +++++ n + + +ll+ ++        +++v r++f+  s+ Y + ++  +++++ +++++p+++Y  +Kla+   + a+++
  KHJ32195.1 155 rKVTEEGIEETWMVNYVANFHLLSLLSpairaqppDRDV-RIIFITCSC-YIRCPPLYDDSKLRKEKWNPSRAYNQSKLAMNIFALAFQK 242
                 236778899***************999887766666666.999987755.6667775599***9*****************999888875 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   1.9e-07   0.00058       3      92 ..      56     148 ..      54     180 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 1.9e-07
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT.T-E.EEE----TT-HHHHHHHHHHHHHHS..S---EEEE----- CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal.gae.vevvaaDvsdkdavealleeikaee..ppikGvihaAgvl 92 
                  +itGG+ g+G +la  la++ga+ ++l+    ++d    ++i+ ++++ g + + + ++D+s+   +++  ++  +++  +++  +i +A ++
  KHJ32195.1  56 MMITGGTSGIGAALAFRLAQRGAQIILLVHQP-PNDVFLIEFIEDMRSKsGNQlIYAEQVDLSSLYGIRKFATKWIDSAppRRLDMIILCAATM 148
                 68*********************988887776.7777778999999998766526667899999999999988877776566677887777665 PP

>> DUF4126  Domain of unknown function (DUF4126)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.3   6.2e-07    0.0019      50     142 ..       2      99 ..       1     105 [. 0.82

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 6.2e-07
     DUF4126  50 avltlvElvadkipvvdsvldtiqtfvrpvaGallaaaaagav...e..ldpvlkavlavlaGgllAlvvhlvkaltRlasnastegfgnpvvstlEd 142
                 a+ ++++++ ++ip+v + + ++ t +++++  +  +  +g     e  ++  ++ + ++  G+++Al++ l++ ++  +  + + +    ++ ++Ed
  KHJ32195.1   2 AIHMIIDVLWKYIPMVSRSWSILWTTLAIIIVSIAKWLSIGTRntsErrMNGKVMMITGGTSGIGAALAFRLAQRGAQIILLVHQPPNDVFLIEFIED 99 
                 67899************************999998888888666552568999********************9998877655555555555555555 PP

>> CoA_binding_3  CoA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.6   1.3e-05      0.04      38      96 ..      12      69 ..       1      98 [. 0.69

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.3e-05
  CoA_binding_3 38 slkdafSRlwlaywavvglvllivsrllvravlrrlrrngrne.rrvvavgggeelakqi 96
                   +   ++SR+w + w+++ ++++++ ++l   + +r ++++r++ +++ ++gg+  + +++
     KHJ32195.1 12 KYIPMVSRSWSILWTTLAIIIVSIAKWLS--IGTRNTSERRMNgKVMMITGGTSGIGAAL 69
                   44468******************999988..56666677777724444555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1096  (0.06113); expected 358.6 (0.02)
Passed bias filter:                      598  (0.0333538); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.56u 0.32s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 2442.64
//
Query:       KHJ32196.1  [L=266]
Description: putative atp-dependent dna helicase pif1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-20   74.2   0.0    1.4e-20   73.8   0.0    1.2  1  PIF1             PIF1-like helicase
    5.2e-07   28.0   0.0    6.5e-07   27.7   0.0    1.1  1  Herpes_Helicase  Helicase
  ------ inclusion threshold ------
      0.023   14.5   0.0       0.05   13.4   0.0    1.6  1  UvrD_C_2         UvrD-like helicase C-terminal domain


Domain annotation for each model (and alignments):
>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.8   0.0   2.4e-24   1.4e-20     247     364 .]      21     141 ..       2     141 .. 0.80

  Alignments for each domain:
  == domain 1  score: 73.8 bits;  conditional E-value: 2.4e-24
                 CCS---SS--...........EEEESS......CCHHHHHHHHHHCCSSS--EEEE-EEE...........ESBSSCHHCHHHCCTTSS-SCEEE-TT- CS
        PIF1 247 vsevygdllqeltdkeyleerailcpt......nedvdeiNnyvlsklpgeekeylssDsisksseeieeldalypteflnslkanglpnhvLkLkvGv 339
                  +++y+    ++ d + ++ rail+++      n++v + Nn++ +    e  ey++ D++++++ +  +    yp+efl +l  +glp  +L L+vG+
  KHJ32196.1  21 REFMYPLDQVRSGDVSIFQGRAILTSRndexsrNDEVTSFNNTIAELRATESYEYYAQDKVQNEEARHIN---DYPAEFLHTLGGSGLPFGRLTLQVGI 116
                 455666655557788899999999976111111568999*****9999999*********9887766443...5************************* PP

                 EEEE-S--CTT-SC-TCEEEEEEEE CS
        PIF1 340 pvmllrNldqsaGLcNGtrlivtql 364
                 pvml rNl ++ GLcNGtrli+t+l
  KHJ32196.1 117 PVMLPRNLYPNLGLCNGTRLIITRL 141
                 **********************987 PP

>> Herpes_Helicase  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   1.1e-10   6.5e-07     732     777 ..     190     234 ..     154     257 .. 0.87

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 1.1e-10
  Herpes_Helicase 732 lamtiaksqGlslekvAicFgnhknlklssvYvalsRatdseflvm 777
                       +mti ksqG  l++v ++ +        ++YvalsR+td ++l +
       KHJ32196.1 190 FSMTIYKSQGQTLQRVGVDLSTP-LFSHGQLYVALSRVTDVNNLLL 234
                      69*******************99.8999**************9976 PP

>> UvrD_C_2  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   8.4e-06      0.05       2      44 ..     189     225 ..     188     228 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 8.4e-06
    UvrD_C_2   2 ayaltihkaQGsefpaVivfdpdlaaarmgelrrrlLYtavTR 44 
                 ++ +ti+k+QG+  + V v   dl+++  +  ++  LY+a++R
  KHJ32196.1 189 CFSMTIYKSQGQTLQRVGV---DLSTPL-F--SHGQLYVALSR 225
                 689****************...444432.2..3678****999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1911.48
//
Query:       KHJ32197.1  [L=377]
Description: hypothetical protein EV44_g3571 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0037   17.3   0.9     0.0037   17.3   0.9    1.6  2  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.5      0.61   1.1e+04       7      11 ..      17      21 ..      17      21 .. 0.92
   2 !   17.3   0.9   2.1e-07    0.0037       3      18 .]      81      96 ..      79      96 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.61
                SSSSS CS
     zf-CCHC  7 GepGH 11
                G++GH
  KHJ32197.1 17 GNMGH 21
                89*** PP

  == domain 2  score: 17.3 bits;  conditional E-value: 2.1e-07
                TSSSSSSSSTTTTSTS CS
     zf-CCHC  3 CynCGepGHiardCpk 18
                C +CG++GHi ++Cp+
  KHJ32197.1 81 CIRCGSIGHIGSNCPE 96
                779************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       488  (0.0272185); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2694.85
//
Query:       KHJ32198.1  [L=527]
Description: putative protein dml1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-68  228.9   1.9    8.8e-67  224.3   0.8    2.4  2  Tubulin_3        Tubulin domain
    7.5e-37  126.2   0.1    1.8e-36  125.0   0.1    1.7  1  Misat_Tub_SegII  Misato Segment II tubulin-like domain
    0.00018   21.8   0.0        0.2   11.8   0.0    2.5  2  Tubulin          Tubulin/FtsZ family, GTPase domain


Domain annotation for each model (and alignments):
>> Tubulin_3  Tubulin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.01        60      36      92 ..      14      71 ..       3     116 .. 0.68
   2 !  224.3   0.8   1.5e-70   8.8e-67       4     181 .]     121     302 ..     117     302 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.01
   Tubulin_3 36 kllpfedwsvGeeLfeeldkehdlldrdl..rpfaeecdqlrglqvftgvddaWGGfaa 92
                + l  + w++ e+ f+  d+e+ ++d d+  rp +    + +++   t + d  GGf++
  KHJ32198.1 14 NYLATHFWNTLESYFTYTDEEESIVDHDIhfRPGIG-IQNTETFTPRTVIYDLKGGFGS 71
                55555669999****************972244332.3334444444556666666655 PP

  == domain 2  score: 224.3 bits;  conditional E-value: 1.5e-70
   Tubulin_3   4 ltsetvrywsdfnrvfyhPrsivqlneyelnskllpfedwsvGeeLfeeldkehdlldrdlrpfaeecdqlrglqvftgvddaWGGfaakylerlrdey 102
                 l s+tv+ywsd++rv++hP+s+v+lneye+ s+  pfe w+ Ge Lf+++dkehdl++rdlrpf+ee+d+++++qvf+++ddaWG faa+yl++++dey
  KHJ32198.1 121 LDSDTVKYWSDYSRVYFHPKSVVKLNEYEIGSTSWPFESWDEGEALFKSVDKEHDLVERDLRPFIEEADHMQAFQVFSSTDDAWGSFAAQYLQQIKDEY 219
                 689************************************************************************************************ PP

   Tubulin_3 103 gkksilvWvlaleeklkkkkkaklerklkklnkarslkelseqaslyvPiak........ls.daeseWhtsaLlssalesvtlpsrL 181
                 +k+ +l W   lee+   k+   +e+++++ n a+s++ ++++++l++P++         ++ +++s+Wh+saL+s+a+es+tl srL
  KHJ32198.1 220 AKTDVLFWG--LEEDIVIKS---REKRFTSSNIAKSISVIAPESTLFIPLTLpskglpsyITlERNSDWHVSALMSIAVESITLLSRL 302
                 ****98885..555554433...4678999********************95223333222236699*******************98 PP

>> Misat_Tub_SegII  Misato Segment II tubulin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.0   0.1     3e-40   1.8e-36       1     118 []       2     114 ..       2     114 .. 0.96

  Alignments for each domain:
  == domain 1  score: 125.0 bits;  conditional E-value: 3e-40
  Misat_Tub_SegII   1 rEivtlqlGnyaNyvgtHfWNtQesyftydeeeeesevdhdvlfregetkqgqvtytPRllivDlkgslgslrkegelyeekeeeeseeseaat 94 
                      +Eiv+lq+G+++Ny++tHfWNt esyfty++eee s vdhd++fr g++ q+++t+tPR++i+Dlkg++gslrk ++ly+    +e+   ++ +
       KHJ32198.1   2 HEIVSLQFGQRSNYLATHFWNTLESYFTYTDEEE-SIVDHDIHFRPGIGIQNTETFTPRTVIYDLKGGFGSLRKINALYD----TEEPDLSELL 90 
                      8*********************************.9********************************************....6777888899 PP

  Misat_Tub_SegII  95 wdgklevqkqepvekseyqksLdk 118
                      wd   ++q+ e vek +yq+sL++
       KHJ32198.1  91 WDKPAVIQRLESVEKCAYQQSLEQ 114
                      **9999999*************86 PP

>> Tubulin  Tubulin/FtsZ family, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0   0.00072       4.3       1      56 [.       3      65 ..       3      83 .. 0.78
   2 !   11.8   0.0   3.4e-05       0.2      98     148 ..     173     222 ..     160     265 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00072
                EEEEEEEHHHHHHHHHHHHH...HHHCH.......HHHT.........TTEEEEE....EEES CS
     Tubulin  1 eiivigvGqcGnqignelwellakehgiqsdg...dslesfFse....sgkveyiprsvaidt 56
                ei+ +++Gq  n +++++w++l + ++ ++++    +++  F+     +++++++pr+v+ d+
  KHJ32198.1  3 EIVSLQFGQRSNYLATHFWNTLESYFTYTDEEesiVDHDIHFRPgigiQNTETFTPRTVIYDL 65
                79******************88887776433345544444555489999999999****9998 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 3.4e-05
                 HHHHTHHHHHHHHTT-SE.SEEEEEEETTSSHHHHHHHHHHHHHHHTSTTS CS
     Tubulin  98 aaeeileeirkevekcdslqgffitaslgGGTGSGlgpvilevlkeeypka 148
                  ++ +++ +r  +e++d++q+f++++s     GS +++++ + +k+ey+k+
  KHJ32198.1 173 EHDLVERDLRPFIEEADHMQAFQVFSSTDDAWGSFAAQYL-QQIKDEYAKT 222
                 567788899999**********************888886.5678888664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (527 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3998.86
//
Query:       KHJ32199.1  [L=307]
Description: putative alpha-l-rhamnosidase c [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.9e-37  125.5   0.4    1.7e-36  124.2   0.4    1.7  1  DUF2985   Protein of unknown function (DUF2985)


Domain annotation for each model (and alignments):
>> DUF2985  Protein of unknown function (DUF2985)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.2   0.4   9.4e-41   1.7e-36       1      78 []      57     140 ..      57     140 .. 0.98

  Alignments for each domain:
  == domain 1  score: 124.2 bits;  conditional E-value: 9.4e-41
     DUF2985   1 kfvktplgflvtiYglnvvawgamlfLlLlgaapamn......insarkkwieidsqilnALFcvtgfglaPwrfrdlylllri 78 
                 kf+ tp+gf+vt+Ygln+v wg+mlfLl+++aap m+       ns+r+kwieidsq+ln+LFcvtgfg +Pwrfrdl++ll++
  KHJ32199.1  57 KFIITPFGFFVTLYGLNIVGWGGMLFLLICNAAPSMCkptceeSNSSRHKWIEIDSQVLNGLFCVTGFGTVPWRFRDLWYLLQY 140
                 79****************************************888************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2286.85
//
Query:       KHJ32200.1  [L=184]
Description: putative trna splicing endonuclease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-23   83.4   0.0      2e-23   82.6   0.0    1.4  1  Sen15     Sen15 protein


Domain annotation for each model (and alignments):
>> Sen15  Sen15 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.6   0.0   1.1e-27     2e-23       1     100 []      38     184 .]      38     184 .] 0.92

  Alignments for each domain:
  == domain 1  score: 82.6 bits;  conditional E-value: 1.1e-27
       Sen15   1 lvyldLleaknwtdveikeeeelk.....lvllkGrpkkklsed.....................elvlPlelteklslekldkvfkelkeekse.... 69 
                 +++++L  ++ w ++ i+e++ +      ++++ G+p+k+l+ +                     e+vlP+++te++sl+ l+++f+++          
  KHJ32200.1  38 QIRHNLEFQHAWCQLIIHEQSPITqnklpRPMIAGLPPKRLYIHpdeqieilkhgkeeisghpemEWVLPTHVTENWSLQALAEIFDAVGTVPPLsppl 136
                 6899*************9999955599************************************************************994333224667 PP

       Sen15  70 .................rkkrivLaivddDsTvvYYkvtdGlvkPkqn 100
                                  r+kr++La+++dDsTvvYY v+dG+vkP+qn
  KHJ32200.1 137 lnepkdkdvgwqwrgihRQKRLLLATLHDDSTVVYYIVHDGIVKPRQN 184
                 77888899**************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       363  (0.0202465); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1355.45
//
Query:       KHJ32201.1  [L=363]
Description: putative decaprenyl-diphosphate synthase subunit 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.4e-73  245.2   0.0      1e-72  244.3   0.0    1.4  1  polyprenyl_synt  Polyprenyl synthetase
  ------ inclusion threshold ------
      0.068   12.8   0.0       0.11   12.1   0.0    1.3  1  HEPPP_synt_1     Heptaprenyl diphosphate synthase (HEPPP synt


Domain annotation for each model (and alignments):
>> polyprenyl_synt  Polyprenyl synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  244.3   0.0   1.2e-76     1e-72       2     254 ..      17     313 ..      16     315 .. 0.92

  Alignments for each domain:
  == domain 1  score: 244.3 bits;  conditional E-value: 1.2e-76
                      HHHHHHHHHHHHSSS--HHHHHHHHHHHHHS.CG......H........................................HHHHHHHHHHHHH CS
  polyprenyl_synt   2 elleealeylveagGKrlRpllvllaaealk.ee......e........................................eelekaavlawiv 48 
                      +ll+++++y+++ +GK++Rpl+vll+++a++ ++      e                                        + l ++++la+i+
       KHJ32201.1  17 PLLDTVAKYYTQTEGKHIRPLIVLLMSRATAlSPkvadfqEqqclsnvddslsplsilsdlnpesstesansqsldptfnaDILPSQRRLAEIT 110
                      67999**************************64456666515666677777888888888889999999999999999999999********** PP

                      HHHHHHHHHHHHHHTT-SEETTEE-HHHCTCHHHHHHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHH....HHTTTTTCCC. CS
  polyprenyl_synt  49 ellhaasLvhDDimDdsetRRGqpcahrlvGnklAindgdfllarafellaklfekslellelfsevllqtveGqlldl....eeekdddlskf 138
                      el+h+asL+hDD++Dds+ RRG+ +a+ ++Gnk+A+++gdfll+ra+  la+l  +++e++el+++v++++veG++++l    +eek++  ++ 
       KHJ32201.1 111 ELIHTASLLHDDVVDDSTSRRGNLSANLKFGNKMAVLAGDFLLGRASVALARL--RDAEVTELLATVIANLVEGEFMQLrntaREEKNPVWTED 202
                      *****************************************************..999*********************665545567777799 PP

                      SHHHHHHHHHHHTHHHCHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHSS-TSHHHHTT---HHHHHHHHCT-HHHH CS
  polyprenyl_synt 139 sleeyleivkyKTaylfalpvalaallagasdeelealkdiglelGlaFQiqDDylDlfgdpevlgKpagtDiqegkctlpilkalelaspeqr 232
                      +++ yl++++ KTa+l++ ++++ all+ +++e ++a++++g++lGlaFQ++DD+lD+++++++lgKp+g+D++ g +t+p+l+a++       
       KHJ32201.1 203 TINYYLKKTYLKTASLISKSCRATALLGRVTPEIVDAAYSYGKNLGLAFQLVDDMLDYTTSEKELGKPTGADLELGLATAPLLFAWQ-H----Y 291
                      ***************************************************************************************.3....3 PP

                      HHHHHHTTSSHHHHHHHHHHHH CS
  polyprenyl_synt 233 kvlkeilgkkaekeedvkeale 254
                      ++l +++g+k+++++d+ +a +
       KHJ32201.1 292 EELGTLVGRKFANKGDISRARH 313
                      46*************9988765 PP

>> HEPPP_synt_1  Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.2e-05      0.11      42     109 ..     110     182 ..      95     210 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.2e-05
  HEPPP_synt_1  42 amlvqiAldtHdkvsekkeeeeee.kkn....rqLtVLAGdyYSglYYklLaevkdielirllaeaikeineh 109
                   + l+++A   Hd v + ++++  + + n     ++ VLAGd+  g    +La+++d e  +lla+ i +  e 
    KHJ32201.1 110 TELIHTASLLHDDVVDDSTSRRGNlSANlkfgNKMAVLAGDFLLGRASVALARLRDAEVTELLATVIANLVEG 182
                   56899999999999876443332202222223689******************************99988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       343  (0.019131); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2748.68
//
Query:       KHJ32202.1  [L=101]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.023   14.3   0.0      0.026   14.1   0.0    1.0  1  Casc1     Cancer susceptibility candidate 1
      0.077   13.7   0.0       0.13   13.1   0.0    1.4  1  GST_N_4   Glutathione S-transferase N-terminal domain


Domain annotation for each model (and alignments):
>> Casc1  Cancer susceptibility candidate 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.9e-06     0.026      23     104 ..      14      92 ..      10     100 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.9e-06
       Casc1  23 DrlselaksfkryidepivDiedslireWllqldieneiifsletklvryelyiskkeeeeakaargyvtdekkekkakksk 104
                 +++s +a +f   +   i  i +s +r W  +l i +++i++ e  l+++ + ++   +ee +a ++y    k +++a  s+
  KHJ32202.1  14 GHYSVNANAFLPEELAEILVIRQSRERAWHTRLMICATVISNTEITLANFTKKVE---KEEVVALKAYLRMAKAKYVAADSS 92 
                 69****************************************9999999999888...69999*****99999999887765 PP

>> GST_N_4  Glutathione S-transferase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.4e-05      0.13       3      35 ..      72      99 ..      70     101 .] 0.73

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.4e-05
     GST_N_4  3 clkletyLrmagipyelepssnemhaspkgklP 35
                +++l++yLrma+ +y   +ss +  a    k+P
  KHJ32202.1 72 VVALKAYLRMAKAKYVAADSS-P--AP--PKIP 99
                789*************87444.3..32..3555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       704  (0.039266); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.21s 00:00:00.59 Elapsed: 00:00:00.35
# Mc/sec: 866.15
//
Query:       KHJ32203.1  [L=434]
Description: putative ribosomal protein s17 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       813  (0.0453455); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.21s 00:00:00.73 Elapsed: 00:00:00.36
# Mc/sec: 3564.60
//
Query:       KHJ32204.1  [L=311]
Description: putative vacuolar h+-atpase assembly protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.9e-41  139.2   0.0    1.7e-40  138.3   0.0    1.5  1  Vma12     Endoplasmic reticulum-based factor for assembly of 
  ------ inclusion threshold ------
        1.9    8.3   5.1        0.6   10.0   0.5    2.4  3  LapA_dom  Lipopolysaccharide assembly protein A domain


Domain annotation for each model (and alignments):
>> Vma12  Endoplasmic reticulum-based factor for assembly of V-ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.3   0.0   1.9e-44   1.7e-40       2     139 .]     115     260 ..     114     260 .. 0.87

  Alignments for each domain:
  == domain 1  score: 138.3 bits;  conditional E-value: 1.9e-44
       Vma12   2 LlrgskvyvpppppkpepspEykallarLraeqeereYkrlinsvdpsqksgktdspss...........sd.deltaqelkevnrqlilvlNiliSvv 88 
                 Ll+gsk+yvppp+pkpe++p++k l+arLr+++e r+Y+++i ++ p++  ++  ++ +           s+ de+ ++++++++rq++l++N+liS++
  KHJ32204.1 115 LLQGSKIYVPPPSPKPEKTPQFKSLMARLRQDEEMRSYREMIGQKLPKDTISQRYQD-TladgafpsnysSPtDEIDEVMYADIRRQVTLIFNVLISIL 212
                 9*******************************************7766655554442.2466777776652254444555******************* PP

       Vma12  89 avffavwialrsartpslpvrvllslvvallVgvAEvvvyakylrkveeak 139
                 a++ a+w + r++   s+p+r+ ls+ +++lVg+AE++++ +y+r+v+eak
  KHJ32204.1 213 ACGSAIWTVGRWW---STPTRLALSMSGSILVGLAEIFIFWGYIRRVSEAK 260
                 *************...*********************************98 PP

>> LapA_dom  Lipopolysaccharide assembly protein A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.12   1.1e+03      33      61 ..       4      32 ..       1      34 [. 0.72
   2 ?   -3.8   0.1       1.4   1.2e+04      39      54 ..     139     154 ..     138     158 .. 0.71
   3 ?   10.0   0.5   6.7e-05       0.6      13      61 ..     225     271 ..     218     273 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.12
    LapA_dom 33 lgwllslwsylrlrrelrrlkkkikklek 61
                l++   ++  ++  +e+r+ k  i k ++
  KHJ32204.1  4 LTITPLIIEAIKISSEIRKNKDYIHKSQN 32
                44444557788999****99998888765 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 1.4
    LapA_dom  39 lwsylrlrrelrrlkk 54 
                 l+++lr+  e+r+ ++
  KHJ32204.1 139 LMARLRQDEEMRSYRE 154
                 6778888888887765 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 6.7e-05
    LapA_dom  13 aqvelpLsllllvafgiGallgwllslwsylrlrrelrrlkkkikklek 61 
                 +++  +L+l + +++++G+  + ++ +w y+r  +e++++++k+k+ ++
  KHJ32204.1 225 WSTPTRLALSMSGSILVGL--AEIFIFWGYIRRVSEAKAKEQKVKEVKE 271
                 5557788888888888885..5566667789**************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       856  (0.0477439); expected 358.6 (0.02)
Passed bias filter:                      634  (0.0353617); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 2594.37
//
Query:       KHJ32205.1  [L=212]
Description: putative glutathione s-transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-20   71.9   0.0    7.4e-20   71.1   0.0    1.5  1  GST_N     Glutathione S-transferase, N-terminal domain
    8.1e-15   55.0   0.0    2.7e-14   53.3   0.0    1.8  2  GST_N_3   Glutathione S-transferase, N-terminal domain
    5.5e-14   52.1   0.1    1.2e-13   51.1   0.2    1.5  2  GST_C     Glutathione S-transferase, C-terminal domain
    3.7e-13   49.6   0.0    6.5e-13   48.8   0.0    1.4  1  GST_N_2   Glutathione S-transferase, N-terminal domain
    4.8e-07   29.9   0.2    7.9e-07   29.2   0.2    1.4  1  GST_C_3   Glutathione S-transferase, C-terminal domain
    7.2e-05   22.7   0.1    0.00017   21.5   0.1    1.6  1  GST_C_2   Glutathione S-transferase, C-terminal domain
     0.0081   16.6   0.0      0.012   16.0   0.0    1.2  1  DUF664    Protein of unknown function (DUF664)
  ------ inclusion threshold ------
      0.094   12.9   0.3       0.44   10.7   0.0    2.3  2  zf-NOSIP  Zinc-finger of nitric oxide synthase-interacting pr


Domain annotation for each model (and alignments):
>> GST_N  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   0.0   3.3e-23   7.4e-20       9      76 .]       9      76 ..       1      76 [. 0.89

  Alignments for each domain:
  == domain 1  score: 71.1 bits;  conditional E-value: 3.3e-23
                STSHTHHHHHHHHHHTT-EEEEEEECSTTTCGGCHHHHHHCTTS-SSEEEETTEEEESHHHHHHHHHH CS
       GST_N  9 rgsprahrirlllaakgveyevvpldfeageekspellklnplgkvPaLedngkkltESraIleYiar 76
                r    +  ++++l++kgveye v +d+ +g++k p++lkl+p+gk+P+Le++g+ l ESraI++Yi r
  KHJ32205.1  9 RAATCTQGVLATLEEKGVEYELVSIDLMKGQHKTPDYLKLHPFGKIPVLEHDGFFLYESRAICNYISR 76
                55555667889999****************************************************85 PP

>> GST_N_3  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.3   0.0   1.2e-17   2.7e-14      10      72 ..      14      79 ..       6      84 .. 0.88
   2 ?   -1.9   0.0       2.1   4.6e+03       5      16 ..     170     181 ..     166     197 .. 0.58

  Alignments for each domain:
  == domain 1  score: 53.3 bits;  conditional E-value: 1.2e-17
                HHHHHHHHHHHT--EEEE---..TTTT.HHHHHHH-TT--SSEEETTS-EEESHHHHHHHHHHHH- CS
     GST_N_3 10 arrvrlaLnekglpvevvevt..pgeh.deellaknplgkvPvLeddgealtdSlaIidyLeelyp 72
                ++ v  +L+ekg+++e+v+++  +g+h  + +l+ +p gk+PvLe+dg  l++S+aI+ y+ +ly+
  KHJ32205.1 14 TQGVLATLEEKGVEYELVSIDlmKGQHkTPDYLKLHPFGKIPVLEHDGFFLYESRAICNYISRLYA 79
                677999***********99975566666*********************************99997 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.1
                 TTSHHHHHHHHH CS
     GST_N_3   5 paSpyarrvrla 16 
                  + py +++r++
  KHJ32205.1 170 LHVPYGKKIREL 181
                 555666666653 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0         4   8.9e+03      71      91 ..      60      79 ..      56      81 .. 0.74
   2 !   51.1   0.2   5.3e-17   1.2e-13      17      93 .]     112     204 ..      93     204 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4
                TTTTTTTTSHHHHHHHHHHHT CS
       GST_C 71 glafgqekfpnlkawlerima 91
                +++f+  +  +++ +++r++a
  KHJ32205.1 60 DGFFL-YESRAICNYISRLYA 79
                56666.777889999998877 PP

  == domain 2  score: 51.1 bits;  conditional E-value: 5.3e-17
                 H................HHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSSTTSSCHHHHHHHHHHHHHHHHTTTTTTTTSHHHHHHHHHHHTSH CS
       GST_C  17 e................ekkeelvdealekvaevlsaleeelkkqdylvGdkltlADialvpilnwlqrlglafgqekfpnlkawlerimarp 93 
                 +                +++e++v+++ ek++ v++ +e+ l+kq yl+G+++tlAD ++vp  +  ++lg++   ek+p++ +w+ r+  r+
  KHJ32205.1 112 SaskiayekifklwrggKTDEAVVAAEAEKLDDVFKGYEAILAKQQYLAGQEITLADMLHVPYGKKIRELGYKSIFEKYPHVEQWYLRVEGRD 204
                 3444445555666677789********************************************************************998875 PP

>> GST_N_2  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.0   2.9e-16   6.5e-13       4      68 ..      13      75 ..      10      77 .. 0.90

  Alignments for each domain:
  == domain 1  score: 48.8 bits;  conditional E-value: 2.9e-16
                HHHHHHHHHHHCT--EEEEEEH...-TTSHHHHHHHHCTTTSSSEEE-CTTEEEESHHHHHHHHH CS
     GST_N_2  4 wahRvlialalkglediisvvvlepkgfekseefprlnprgtVPvLwdkdgqvineSseIlryle 68
                +++ vl +l++kg+e+++  ++l+ kg +k++++++l+p+g++PvL + dg  ++eS++I+ y+ 
  KHJ32205.1 13 CTQGVLATLEEKGVEYELVSIDLM-KGQHKTPDYLKLHPFGKIPVLEH-DGFFLYESRAICNYIS 75
                67889************9999776.7777789***************7.**************86 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.2   3.5e-10   7.9e-07      19      91 ..     132     205 ..     107     212 .] 0.81

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 3.5e-10
                 HHHHHHHHHHHHCHHHHHHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHH...TCCCC-HHHHHHHHHHHTSHH CS
     GST_C_3  19 ekkkefleerlpkflkyfekvlkkkgggylvgdklTyADlalfqvldgleea...ealkkfpklkalyervearpk 91 
                 e+  +   e+l +++k +e +l+  +++yl+g+++T+AD++ + + ++++e+   ++ +k+p++ ++y rve r +
  KHJ32205.1 132 EAVVAAEAEKLDDVFKGYEAILA--KQQYLAGQEITLADMLHVPYGKKIRELgykSIFEKYPHVEQWYLRVEGRDS 205
                 6666777899*************..999************************875445*************99876 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.1   7.6e-08   0.00017       1      67 [.     132     197 ..     132     199 .. 0.94

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 7.6e-08
                 HHHHCHHHHHCCHCHHHCTTT---SS.CTTCS--HHHHHHHHHHHHHHHHHHS----TT-HHHHHHH CS
     GST_C_2   1 eaaveraleqldaaldaleahLadspflfGdqptlaDialapflvrlraagpgfdireaypnlraWl 67 
                 ea+v++  e+ld  ++  ea+La++++l+G ++tlaD    p     r  g++  i e+yp++ +W+
  KHJ32205.1 132 EAVVAAEAEKLDDVFKGYEAILAKQQYLAGQEITLADMLHVPYGKKIRELGYK-SIFEKYPHVEQWY 197
                 57888999999****************************************75.89**********9 PP

>> DUF664  Protein of unknown function (DUF664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   5.4e-06     0.012      43     115 ..     101     175 ..      82     187 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 5.4e-06
                 HHHHHHHHHHHHTT-S---TTTSHH..TTTSSS---SS---HHHHHHHHHHHHHHHHHHHTT--HHHHTSB-T-. CS
      DUF664  43 vaevErgwfrrvlggeeevpldrsa..adpdadfelaedetladllaeyrravaradavvaaeldldetvrvpka 115
                 +a+vEr++f++ + + + +++++     + d+ + +ae e+l+d+++ y++  a+ + ++ +e +l +  +vp  
  KHJ32205.1 101 AASVERSYFHESASKIAYEKIFKLWrgGKTDEAVVAAEAEKLDDVFKGYEAILAKQQYLAGQEITLADMLHVPYG 175
                 699*********99987777666555599999999*********************9999999999999998764 PP

>> zf-NOSIP  Zinc-finger of nitric oxide synthase-interacting protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0    0.0002      0.44      29      71 ..      32      74 ..       9      80 .. 0.68
   2 ?   -1.6   0.0       1.4   3.1e+03      53      73 ..     151     171 ..     145     172 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.0002
    zf-NOSIP 29 svrlikdavkdfdccslslqa.crdpvltedgy.lyekeaileyi 71
                s+ l+k   k  d   l l +  + pvl +dg+ lye  ai +yi
  KHJ32205.1 32 SIDLMKGQHKTPDY--LKLHPfGKIPVLEHDGFfLYESRAICNYI 74
                55555555555543..444442477*******549*********9 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.4
    zf-NOSIP  53 pvltedgylyekeaileyilh 73 
                  +l+++ yl  +e  l  +lh
  KHJ32205.1 151 AILAKQQYLAGQEITLADMLH 171
                 678889999999999998888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.41u 0.20s 00:00:00.61 Elapsed: 00:00:00.36
# Mc/sec: 1786.56
//
Query:       KHJ32206.1  [L=420]
Description: putative thiamine-repressible mitochondrial transport protein thi74 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-08   32.7  39.8      4e-06   27.0   4.5    3.1  3  EamA      EamA-like transporter family
    2.2e-07   30.7   9.9    2.2e-07   30.7   9.9    2.1  2  SLC35F    Solute carrier family 35
    2.6e-07   30.4   6.1    1.9e-06   27.6   3.5    3.6  3  DUF3955   Protein of unknown function (DUF3955)
      1e-06   28.3   1.1      1e-06   28.3   1.1    2.5  3  PUNUT     Purine nucleobase transmembrane transport
    1.1e-05   24.8   9.0    1.1e-05   24.8   9.0    1.5  2  UAA       UAA transporter family
      0.003   16.5   7.8       0.15   11.0   0.0    2.5  3  CRT-like  CRT-like, chloroquine-resistance transporter-like


Domain annotation for each model (and alignments):
>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   4.6     0.075   2.2e+02       2      50 ..      44      95 ..      43     106 .. 0.82
   2 !   27.0   4.5   1.3e-09     4e-06      76     136 ..     186     246 ..     169     247 .. 0.93
   3 !   16.2  14.9     3e-06    0.0091       3     136 ..     273     413 ..     271     414 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.075
        EamA  2 lgillallaalfwaiyfvlskillrkv...spltltfvrfliagillliial 50
                lgi+l+++  ++w ++ +l+ +++++     p+++t v + + ++ l++i l
  KHJ32206.1 44 LGIILLIATLILWTSSNFLASYIFADNsysKPYFVTYVNTAFFAFSLIPIFL 95
                79******************99977664557888888888877777777765 PP

  == domain 2  score: 27.0 bits;  conditional E-value: 1.3e-09
        EamA  76 vlafllffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvllil 136
                 + a++l+   lk+ts++  +++ts+  ++tli+++l   e+++ ++l+g++ +l+Gv+l++
  KHJ32206.1 186 FSANYLIAACLKYTSVASSTILTSTCSIWTLIFGALAKVERFSCRKLFGVIASLVGVILVS 246
                 668899*****************************************************97 PP

  == domain 3  score: 16.2 bits;  conditional E-value: 3e-06
        EamA   3 gillallaalfwaiyfvlskillrkvspl...tltfvrfliagill....liiallkegklaklslkdwllllllgllgtvlafllffyalkktsasna 94 
                 g  +a+ +al+++iy+vl+k+ + + + +    +++++ l+  i+l    l++++   ++++ ++ +++ l++ll    +++  +++ ya+  t++ ++
  KHJ32206.1 273 GNTMAIGSALLYGIYTVLMKKRIDNEDRVnmpLFFGLTGLFNLIFLwpgfLVLHASGIETFELPPTRHIWLIVLLNSTFSLISDIFWAYAMLLTGPLVV 371
                 7889****************9987775554336666777777777765534445555555566666665555555556778999*************** PP

        EamA  95 slitslePvftlilsvlllgekltlkqllgivlillGvllil 136
                 ++ +sl+  ++l+  ++l  +  + + ++g+ +++++ l+++
  KHJ32206.1 372 TVGLSLSIPLSLVAQIFLSSQYSSGLYWVGATIVFFSFLIVS 413
                 *******************99999************999886 PP

>> SLC35F  Solute carrier family 35
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.7     0.072   2.1e+02     229     250 ..      76      97 ..      40     117 .. 0.66
   2 !   30.7   9.9   7.3e-11   2.2e-07      80     297 ..     182     412 ..     176     414 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.072
      SLC35F 229 lfvgfalvlfllysllpilikk 250
                 +fv+++ + f  +sl+pi +k 
  KHJ32206.1  76 YFVTYVNTAFFAFSLIPIFLKF 97 
                 6777777777777777777775 PP

  == domain 2  score: 30.7 bits;  conditional E-value: 7.3e-11
      SLC35F  80 alvdveanylvvkayqytsltsvqlldcfaipvvlvlswlflkvryrlvkiigvvvcilGvvllvvsdvlagrra.n.......sgsnpvlGdllvlaG 170
                 +l+   anyl+    +yts+ s ++l + +    l++  l    r+ + k+ gv++ ++Gv+l+ + d+   +++ n       s s+  lG+++ +  
  KHJ32206.1 182 CLLWFSANYLIAACLKYTSVASSTILTSTCSIWTLIFGALAKVERFSCRKLFGVIASLVGVILVSIVDLSGKDNDeNrgnfphkSQSEIALGNTMAIGS 280
                 566678**********************9999999999999999********************999997655442212222226788899******** PP

      SLC35F 171 atlyavsnvleeylvkklslve...llgllglfGaiisaiqlailerkelkaih.....Wdaeiallfvgfalvlfllysllpilikktsatsvnlsll 261
                 a ly++  vl    + + ++v+   ++gl glf  i+     ++l+   +++ +       + i+ll  +f+l+  ++++++ +    t+  +v+++l 
  KHJ32206.1 281 ALLYGIYTVLMKKRIDNEDRVNmplFFGLTGLFNLIFLWPGFLVLHASGIETFElpptrHIWLIVLLNSTFSLISDIFWAYAML---LTGPLVVTVGLS 376
                 ***************999998733368889999999877777777666666655100005566666666666666666655544...589999999999 PP

      SLC35F 262 tsdlyslliglflfhykvswlyllafvviliGlily 297
                  s   sl+ ++fl  +  s+ly +  +++   +++ 
  KHJ32206.1 377 LSIPLSLVAQIFLSSQYSSGLYWVGATIVFFSFLIV 412
                 9999********************999999888775 PP

>> DUF3955  Protein of unknown function (DUF3955)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   3.5   6.4e-10   1.9e-06       3      54 ..      43      94 ..      41      98 .. 0.94
   2 ?   -3.2   0.0       2.7   7.9e+03      16      29 ..     138     151 ..     137     151 .. 0.82
   3 ?    0.4   0.0       0.2     6e+02       4      24 ..     233     253 ..     230     258 .. 0.75

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 6.4e-10
     DUF3955  3 iigllllllgiilliisnisgsyvdedGiLhEPFfLipiGylllligiislv 54
                ++g++ll++ +il++ sn+  sy+ +d  + +P f +++++ ++++++i ++
  KHJ32206.1 43 TLGIILLIATLILWTSSNFLASYIFADNSYSKPYFVTYVNTAFFAFSLIPIF 94
                799******************************99*************9876 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.7
     DUF3955  16 liisnisgsyvded 29 
                 l++s+  gs++d++
  KHJ32206.1 138 LMLSSHNGSHIDNN 151
                 68888899***986 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.2
     DUF3955   4 igllllllgiilliisnisgs 24 
                 +g++  l+g+il+ i  +sg+
  KHJ32206.1 233 FGVIASLVGVILVSIVDLSGK 253
                 677888889999888887776 PP

>> PUNUT  Purine nucleobase transmembrane transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.8      0.16   4.8e+02     136     181 ..      47      91 ..      41     103 .. 0.49
   2 !   28.3   1.1   3.4e-10     1e-06      73     186 ..     173     294 ..     152     307 .. 0.84
   3 ?   -1.9   0.4      0.52   1.6e+03     185     219 ..     340     376 ..     321     411 .. 0.59

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.16
       PUNUT 136 vlltisaallalssssdkpaeeskkkyvigfiltlaasllfaLlLs 181
                 +ll+ +  l  +s++  ++  +  ++y+  +++t + +++fa++L 
  KHJ32206.1  47 ILLIATLILWTSSNFLASYIFAD-NSYSKPYFVTYVNTAFFAFSLI 91 
                 43333333333333333333333.4555555555555555555553 PP

  == domain 2  score: 28.3 bits;  conditional E-value: 3.4e-10
       PUNUT  73 klvllyivlGllvavdnllyslgllylpvstfslilatqLaFtaifsalinkqkftrfiinsvvlltisaallalssssdkpaees........kkkyv 163
                 + + l++  +ll +  n+l +  l+y +v  ++++++t  ++t if al    +f +  ++ v+   ++  l+++ + s+k + e+        +++ +
  KHJ32206.1 173 ETAKLSLEFCLLWFSANYLIAACLKYTSVASSTILTSTCSIWTLIFGALAKVERFSCRKLFGVIASLVGVILVSIVDLSGKDNDENrgnfphksQSEIA 271
                 5566777889*************************************************9999999999888888776666665554445554478899 PP

       PUNUT 164 igfiltlaasllfaLlLslvell 186
                  g  ++++++ll++++  l+++ 
  KHJ32206.1 272 LGNTMAIGSALLYGIYTVLMKKR 294
                 99************999998865 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.52
       PUNUT 185 llfekvlkketfslvlemqiv..lslvatvvcvvGll 219
                  ++  vl ++tfsl+ ++     + l+  +v++vGl 
  KHJ32206.1 340 HIWLIVLLNSTFSLISDIFWAyaMLLTGPLVVTVGLS 376
                 5555555555555555543320033334455555553 PP

>> UAA  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1      0.89   2.7e+03     154     166 ..      44      56 ..      33      99 .. 0.55
   2 !   24.8   9.0   3.8e-09   1.1e-05      71     299 ..     184     413 ..     179     416 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.89
         UAA 154 lGiallvlallld 166
                 lGi+ll+ +l+l 
  KHJ32206.1  44 LGIILLIATLILW 56 
                 5555555554443 PP

  == domain 2  score: 24.8 bits;  conditional E-value: 3.8e-09
         UAA  71 lffitsvlnnealkydisvPvhiifrssklipvmilGililgkrYsllqylsvllltlGviiftllsakdk......kedskeslnkfllGiallvlal 163
                 l f  + l    lky  sv   +i+ s+  i ++i G+l    r+s ++   v+   +Gvi++++++ + k       +  ++s+++  lG ++ +++ 
  KHJ32206.1 184 LWFSANYLIAACLKY-TSVASSTILTSTCSIWTLIFGALAKVERFSCRKLFGVIASLVGVILVSIVDLSGKdndenrGNFPHKSQSEIALGNTMAIGSA 281
                 567778888899***.************************************************98876666566654445677888899999999999 PP

         UAA 164 lldavlglvqeklykkygkhskealfyshllslplflllqgellsavkflsesedvallslpsklfylllnvltqyvcikgVlilisefgaltvtlvlt 262
                 ll ++  ++  k     ++++ ++ ++  l +l  +++l+  +l  v  +s  e+++l      ++ +lln++ + ++  +  + +  +g l+vt+ l+
  KHJ32206.1 282 LLYGIYTVLMKKRID--NEDRVNMPLFFGLTGLFNLIFLWPGFL--VLHASGIETFELPPTRHIWLIVLLNSTFSLISDIFWAYAMLLTGPLVVTVGLS 376
                 988887777777666..555557777777777776667666554..23334444444445557899999*******9999999999************* PP

         UAA 263 lRKfvslllSillFknpltlqhlvgtllVflglllys 299
                 l   +sl+  i l ++  +  ++vg+ +Vf++ l+ s
  KHJ32206.1 377 LSIPLSLVAQIFLSSQYSSGLYWVGATIVFFSFLIVS 413
                 *******************************998765 PP

>> CRT-like  CRT-like, chloroquine-resistance transporter-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2      0.93   2.8e+03     157     172 ..      84      99 ..      46     129 .. 0.58
   2 !   11.0   0.0   5.1e-05      0.15      89     152 ..     196     259 ..     184     263 .. 0.87
   3 !    9.6   0.9   0.00013      0.39      67     140 ..     337     414 ..     278     419 .. 0.70

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.93
    CRT-like 157 llllisviPvalSnvy 172
                  ++ +s+iP+ l  vy
  KHJ32206.1  84 AFFAFSLIPIFLKFVY 99 
                 2333334443333333 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 5.1e-05
    CRT-like  89 avstsGslqvllnqaiipitllasllllkerysliqylGAlviilgvvvvlipsllgessegnk 152
                   +ts    ++l+ ++   tl++  l   er+s+ ++ G +  ++gv++v i +l+g+ +++n 
  KHJ32206.1 196 LKYTSVASSTILTSTCSIWTLIFGALAKVERFSCRKLFGVIASLVGVILVSIVDLSGKDNDENR 259
                 45677777889999*******************************************9999885 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.00013
    CRT-like  67 pkrkFaimgaLDavsgil.vvi..gavstsGslqvlln.qaiipitllasllllkerys.liqylGAlviilgvvvvli 140
                 p+r+ +++  L +  +++  ++   a+ ++G+l v ++  ++ip++l+a  ++l ++ys  +  +GA+++  + ++v +
  KHJ32206.1 337 PTRHIWLIVLLNSTFSLIsDIFwaYAMLLTGPLVVTVGlSLSIPLSLVAQ-IFLSSQYSsGLYWVGATIVFFSFLIVSQ 414
                 567777777777644433133321245689999988862679****9875.67777776156779*****999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       788  (0.0439511); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2961.87
//
Query:       KHJ32207.1  [L=224]
Description: hypothetical protein EV44_g3731 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       531  (0.0296168); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1738.16
//
Query:       KHJ32208.1  [L=770]
Description: hypothetical protein EV44_g5533 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.9e-130  436.1  25.5     3e-130  435.5  25.5    1.3  1  DUF2457      Protein of unknown function (DUF2457)


Domain annotation for each model (and alignments):
>> DUF2457  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  435.5  25.5  1.7e-134    3e-130       2     467 ..     322     769 ..     321     770 .] 0.80

  Alignments for each domain:
  == domain 1  score: 435.5 bits;  conditional E-value: 1.7e-134
     DUF2457   2 FheFasdeeeeddWirkdtevvkeklTinDtlkkEnairkLgeeaeeEaeeeeeeeeddeedeeddddddddedddedddeedededddstvedlseea 100
                 F eFas+e e ++W+r+d + +++klTi+Dt+kkEn+ir+L++e+e+E ++e e + dd e  +d++   d+eddd+dd+ee e +  d +     +++
  KHJ32208.1 322 FFEFASEEVEVENWLRQDLSPLTSKLTIKDTFKKENEIRRLASEVEQEELDEVEANRDDSE-GDDEE---DEEDDDDDDEEEGESN--DFEF--EFDSS 412
                 99**********************************************9998755333333.33322...2333333323333333..2222..34557 PP

     DUF2457 101 sdGyetDnEaGFAdSdeeddedddlelWtpkastaatsaekleqlatklerrlSv..eesSisslesakkseksrkkkarelkskkskirpetpeLPDS 197
                 + G++tDnE GF dSd e+d ++d  +Wtp++   + s+++    +   +  +S+  ++ S ss++   ++++  + k++++k k   +rp+tp+LPDS
  KHJ32208.1 413 DVGNQTDNEGGFTDSD-ESDFEKDNDFWTPRRDECKGSSRQFL-GTDFSSLGASAhyRSGSNSSTDIPPNERNFIRGKRHRRKLKI--MRPGTPDLPDS 507
                 89**************.78889********8888777776655.333333444442356677777776666777777777766554..9********** PP

     DUF2457 198 TDFVCGTlDEDrplEeaYlsclearrrekhkviPQDiDPsFPtsdpededdddevakkkaeesddevwlhgeledldeelrdrrkersrkksekaspkr 296
                 TDFVCGTlDEDrplEeaYlsclear++++hk++PQDiDPsFPtsd ++++ d   ++ +++ s+ +   h+  +dl+  +  r+ +r+r + +  spk+
  KHJ32208.1 508 TDFVCGTLDEDRPLEEAYLSCLEARKQARHKLTPQDIDPSFPTSDTDEDQKD--NKQDVSNFSEGQRKNHNGKSDLKGGRLSRNISRNRGSISCYSPKK 604
                 *********************************************9977743..3444466788888899999999999999998899999999***** PP

     DUF2457 297 lrSppPrrrgksPpkkrlrsPpprklfdrksprrlrspaptarkspaaspaeeaekvkfkelaerpgltrtkSlPrtpalffaqkeakkeka....eee 391
                 l+SppP       pk+r rsP +rk f+++ p+r   ++p++ + + ++p++ +++  + +l +r ++t+tkSlPrtp+lf  q+ + k++     ++ 
  KHJ32208.1 605 LHSPPP-------PKHRFRSP-SRKTFNKS-PKRSIPTTPSHERRL-TMPISPTKAALIFPLGTRSRVTHTKSLPRTPNLFGLQYCEFKSRLfddsDTV 693
                 ******.......6*******.66878765.878777777654444.45555556667778********************999964443335555778 PP

     DUF2457 392 eskkkdthvRgaiDIvkGLEkkrqrRkekfyrkycrrarkeqlkerrpqpGkGaeRmrelGLlvagkv.dagnyvLS 467
                 e ++kd hvRgaiDIvkGLE+krqrRkek+y k  +r++k ++ +r+pqpG GaeRmre+GL++ag++  +  y+LS
  KHJ32208.1 694 EYNHKDHHVRGAIDIVKGLERKRQRRKEKLYMKPNNRKTKANT-DRKPQPGLGAERMREVGLTMAGRTgGQRAYMLS 769
                 8899************************************997.***********************977888***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (770 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       939  (0.0523733); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        81  (0.00451782); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.78u 0.29s 00:00:01.07 Elapsed: 00:00:00.43
# Mc/sec: 5333.74
//
Query:       KHJ32209.1  [L=243]
Description: putative anion-transporting atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.9e-74  249.3   0.1    5.6e-74  249.1   0.1    1.0  1  ArsA_ATPase  Anion-transporting ATPase
  ------ inclusion threshold ------
      0.096   12.6   0.1        6.6    6.6   0.1    2.2  2  AAA_31       AAA domain


Domain annotation for each model (and alignments):
>> ArsA_ATPase  Anion-transporting ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  249.1   0.1   6.2e-78   5.6e-74      90     304 ..      17     233 ..       2     234 .. 0.93

  Alignments for each domain:
  == domain 1  score: 249.1 bits;  conditional E-value: 6.2e-78
                  HHHHHHHHHHHHTSSTTHHHHHHHHHHHHHHHCSSSSEEEEESBSCCHTCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSHCHHHHHH..HHHH CS
  ArsA_ATPase  90 leeledvlaeelaslPGideilsfeellkyvkeeeydvvvlDtaPTGhtlrllslpevleklleklvklkeklsplakqlvkllglggvsie..eale 185
                  + +  +++++ + ++PGide++sf+e+lk vk+  y+++v+DtaPTGhtlr+l++p+vlek l+k+ +l  +++p+++ + +  g+    ++  e++e
   KHJ32209.1  17 TAGIGGMMQDIAFAIPGIDEAMSFAEVLKQVKSLSYETIVFDTAPTGHTLRFLQFPTVLEKALTKVSQLSSQFGPMLNGILGANGTLPNGANlgEMME 114
                  567789*************************************************************************988877755444455**** PP

                  HHHHHHHHHHHHHHHHTSTTTEEEEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEEEEE.E-TTCSSSTSHHHHHHHHHHHHHHHHHHHHTTTSEEEE CS
  ArsA_ATPase 186 eleetkeeikkveeiltdpertsfrlVvipEklslkEteRaikeLkkygikvdavivNk.llpeeeqenCeflearkkiqkkylkeieelfedlevvk 282
                  +le   ++i +v+ +++d++ t+f++V+ipE+lsl+EteR+i+eL++y i+++ ++vN+ l+p  e++ Ce ++ar+k+qkkyl++ieel++d++vv+
   KHJ32209.1 115 KLEGLRDTIGEVNTQFKDENLTTFVCVCIPEFLSLYETERMIQELTSYHIDTHCIVVNQlLFPKAESQ-CEQCNARRKMQKKYLDQIEELYDDFNVVR 211
                  ***********************************************************788888885.***************************** PP

                  EE--SS-S-SHHHHHHHHHHHC CS
  ArsA_ATPase 283 lplleeEvvGlekleklselly 304
                  +pll eEv+G eklek+se+l 
   KHJ32209.1 212 MPLLVEEVRGKEKLEKFSEMLI 233
                  *******************985 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0    0.0052        46     104     128 ..      37      62 ..      23      69 .. 0.81
   2 ?    6.6   0.1   0.00074       6.6      66     119 ..     153     205 ..     112     213 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0052
      AAA_31 104 eeilkellekvkde.YDyiiiDcpPs 128
                    + e+l++vk+  Y  i++D+ P+
  KHJ32209.1  37 AMSFAEVLKQVKSLsYETIVFDTAPT 62 
                 4567899****9955**********7 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.00074
      AAA_31  66 eknikeaiiktkvenldlipssidLaeaeielvelekkeeilkellekvkdeYD 119
                 e  i+e+    ++++  +++ ++ + +ae +  + + ++++ k++l+++++ YD
  KHJ32209.1 153 ERMIQELTS-YHIDTHCIVVNQLLFPKAESQCEQCNARRKMQKKYLDQIEELYD 205
                 344444444.55677789999999*****************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (243 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       872  (0.0486363); expected 358.6 (0.02)
Passed bias filter:                      657  (0.0366445); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1834.65
//
Query:       KHJ32210.1  [L=1413]
Description: putative abc transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-48  163.7   0.1    1.4e-27   96.9   0.0    2.6  2  ABC_tran      ABC transporter
    7.8e-44  150.4  51.0    2.7e-30  106.0  24.9    3.1  3  ABC_membrane  ABC transporter transmembrane region
    0.00012   22.5   0.0       0.52   10.7   0.0    2.6  2  AAA_16        AAA ATPase domain
    0.00015   21.8   0.5       0.45   10.6   0.0    2.7  2  MMR_HSR1      50S ribosome-binding GTPase
     0.0022   18.6   0.1        0.9   10.0   0.0    2.8  2  AAA_23        AAA domain
     0.0023   17.9   0.7       0.53   10.2   0.0    2.6  2  RsgA_GTPase   RsgA GTPase
      0.004   16.6   7.7        3.6    6.9   0.2    4.0  4  SMC_N         RecF/RecN/SMC N terminal domain
     0.0059   16.3   0.8        3.4    7.5   0.0    2.5  2  AAA_29        P-loop containing region of AAA domain
  ------ inclusion threshold ------
      0.012   15.7   1.8      0.089   12.9   0.4    2.5  2  DUF87         Helicase HerA, central domain
      0.016   15.0   0.2        4.1    7.1   0.0    2.6  2  AAA_30        AAA domain
      0.019   14.5   0.1        1.3    8.5   0.0    2.5  2  AAA_7         P-loop containing dynein motor region
      0.035   14.2   1.6          1    9.4   0.1    2.6  2  Dynamin_N     Dynamin family
      0.054   13.4   0.5       0.44   10.4   0.1    2.3  2  NACHT         NACHT domain
      0.072   12.4   0.0       0.19   11.0   0.0    1.6  1  Marek_SORF3   Marek's disease-like virus SORF3 protein
      0.083   12.6   2.6        4.2    7.0   0.0    2.7  3  AAA_15        AAA ATPase domain
        1.1    9.0   7.5        5.8    6.6   0.4    3.4  4  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
        1.2    9.4   4.2         47    4.3   0.0    3.5  4  AAA_22        AAA domain


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.2   0.0   1.6e-20   1.7e-17       1     136 [.     586     720 ..     586     721 .. 0.82
   2 !   96.9   0.0   1.3e-30   1.4e-27       1     137 []    1182    1335 ..    1182    1335 .. 0.86

  Alignments for each domain:
  == domain 1  score: 64.2 bits;  conditional E-value: 1.6e-20
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH..........HHHTCHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren..........esdeeiekal 89 
                 l++++l + ++e+va++G  G+GKS+Ll+++ag +++t+Ge+             +l ++ ++++q + +++++ vren          +     ++++
  KHJ32210.1 586 LQDINLVIGRNELVAVIGGVGCGKSSLLAAIAGDMRKTNGEL-------------KLGASRAFCSQSAWIQNTT-VRENilfgkemqidW----YNQVI 666
                 789***************************************.............7888999999997777777.999999988655542....33333 PP

                 HHSTTGG.......TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTT CS
                 xxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  90 sklglke.......lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpt 136
                 +  +l+         + t +++++ ++SgGqkqr+ +ara+  ++k++l+D+p 
  KHJ32210.1 667 EACNLNPdletfpfGDMTEIGERGVTISGGQKQRINIARAIYFDSKIILMDDPL 720
                 333333334445554578889999****************************97 PP

  == domain 2  score: 96.9 bits;  conditional E-value: 1.3e-30
                  EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.................H CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................x RF
    ABC_tran    1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.................e 80  
                  l+  sl++k ge++++vG++GaGKS+++++l +l++  +G+i +d+ d++++ l+ lr++++++pq+p+lf+++ +r+n                 +
  KHJ32210.1 1182 LNGFSLHVKSGERLGVVGRTGAGKSSIMMTLFRLVELSAGSIVIDNIDISTIGLHDLRSRLAIIPQDPSLFKGT-IRSNldpfsefidmelwsalyQ 1277
                  6789**********************************************************************.******9999665555554441 PP

                  HHTCHHHHHHHSTTGG............TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                  xxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   81 sdeeiekalsklglke............lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137 
                              gl+               d+vv++++s++S Gq+q +alaral++k++++++DE+t+
  KHJ32210.1 1278 -----------SGLVPsstqpnskkndlHLDSVVDDEGSNFSLGQRQLMALARALVRKSRIVICDEATS 1335
                  ...........444444444444444445678999999*****************************96 PP

>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.9      0.19     2e+02       2      88 ..     154     248 ..     153     252 .. 0.70
   2 !   54.1  10.4   1.7e-17   1.8e-14      96     271 ..     295     467 ..     293     470 .. 0.95
   3 !  106.0  24.9   2.6e-33   2.7e-30       2     268 ..     853    1111 ..     852    1119 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.19
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHH......HHHHHHHHHHHHHHHHHHHHHH.HHHHHH..HHHHHHHHHHHHHHHHHHHHCST CS
  ABC_membrane   2 iliillailagvlsplfplvlgrildtlldkgdpet......ealnvysllllllglaqfilal.lqsyll..nvtgerlskrlrrklfkkilrqp 88 
                   +++ ++++ a +++   p++l +++ +    + + +        + + + l+++l+l+q + +l +  +++  +v+g+ ++  l + +f k ++ +
    KHJ32210.1 154 WISGFCQLSASIIQATCPFLLRYLIRFAQL-AYNAKmggpppPSIGIGLGLVFGLTLLQMVQSLqINHSVYrgMVIGGAARASLISLIFTKAMNIS 248
                   688999999999999999999999998855.33333466677455555555555555554444413333336699*****************9987 PP

  == domain 2  score: 54.1 bits;  conditional E-value: 1.7e-17
                   CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH CS
  ABC_membrane  96 svGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgirt 192
                   s G+++++++ d+++++++ + ++++++ +++ + ++ ++ + +  + +l+++++l+l il++  ++k+l + +k+ ++ ++++ s++ E++++ir 
    KHJ32210.1 295 SNGRVMNLMSVDTHRVDQASALFHLVWTSPIACIYTLALLTINMTYS-ALAGFGLLILGILFMTQVTKRLFSRRKNISNITDQRISLTLEIMQAIRF 390
                   57*********************************999999999997.9************************************************ PP

                   HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHH CS
  ABC_membrane 193 VkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailf 271
                   Vk+fg+e++fl k ++ +e++ +a    + +++++++i+ +l+ +s +l+++  t+   +++l +  ++  l+lf+ l 
    KHJ32210.1 391 VKLFGWESAFLIKLQQIREKEIHAIQILLAIRNVMNTISISLPIFSSMLTFL--TYSLTNHNLEPAIVFSSLALFNSLR 467
                   **************************************************55..88888999*****999999998775 PP

  == domain 3  score: 106.0 bits;  conditional E-value: 2.6e-33
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHHHSC CS
  ABC_membrane    2 iliillailagvlsplfplvlgrildtlldkgdpetealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffdtns 96  
                    +++++++i++++++++++l+ + +  ++++++  +      y+ ++++lg+ q++l+++ s + + ++   sk++ ++++ ++lr+pmsffdt++
    KHJ32210.1  853 FIALVFLIASQCTNIITSLWVAWWSANYFGYSRRS------YIAIYVALGVSQALLSFAFSLVVTLISTISSKKIMNRAITRVLRAPMSFFDTTP 941 
                    799**************************955555......599*************************************************** PP

                    HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH CS
  ABC_membrane   97 vGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgir 191 
                     G++++r+++dv+ +++ l+e + +  + l+++++++++++ + + + ++l+++++ ++++s ++    ++lk+ e+  ++ +++ + E lsg  
    KHJ32210.1  942 LGRITNRFSRDVDIMDNELSEAIRVYCMTLVMILTVFCLIIAYFPFFIIALIPLSIFFLYSSSYYRASGRQLKRIESILRSHVFAKFSEGLSGTA 1036
                    *********************************************************************************************** PP

                    HHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHH CS
  ABC_membrane  192 tVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfa 268 
                     ++a+g ++++++k++  l+++++a++     ++++++++++++ l+++++  +++t     ++ ++ +  +ls++ 
    KHJ32210.1 1037 CIRAYGVQNFYISKIQATLDDMNSAYFLTFANQRWSSIRIDIIAILLVFVTGILAITSRF--DVRPSIVGLVLSYIL 1111
                    *********************************************999999444444333..444444444444443 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00049      0.52      21      52 ..     593     628 ..     585     760 .. 0.82
   2 !    9.1   0.0    0.0015       1.5      25     143 ..    1193    1332 ..    1182    1349 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00049
      AAA_16  21 sgrpelvllsGesGvGKsslvrellralekd....g 52 
                  gr elv ++G  G+GKssl+ +++  ++k+    +
  KHJ32210.1 593 IGRNELVAVIGGVGCGKSSLLAAIAGDMRKTngelK 628
                 57889******************9988888755551 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0015
      AAA_16   25 elvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqllde......aesaeleawrekleeala......... 106 
                  e + ++G  G GKss++ +l+r +e + g  +  + d +         + + + ++ l+ + ++      +  ++l++++e+++ +l          
  KHJ32210.1 1193 ERLGVVGRTGAGKSSIMMTLFRLVELSAGSIVIDNIDIS--------TIGLHDLRSRLAIIPQDpslfkgTIRSNLDPFSEFIDMELWsalyqsglv 1281
                  45669****************977777333333344444........34444444666666666666777666677777777777777777777777 PP

      AAA_16  107 .............avpelagaeasrllellkrllallsrderp.lvlvlDd 143 
                                 +++ ++e s +    ++l+al++   r+  ++++D+
  KHJ32210.1 1282 psstqpnskkndlHLDSVVDDEGSNFSLGQRQLMALARALVRKsRIVICDE 1332
                  776666666666644444444444444444444444444333335666666 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.1    0.0016       1.7       2      24 ..     599     621 ..     598     648 .. 0.84
   2 !   10.6   0.0   0.00042      0.45       2      21 ..    1195    1214 ..    1194    1239 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0016
                 EEEEESTTSSHHHHHHHHHTSTE CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgeka 24 
                 va++G    GKS+L+ a+ g+  
  KHJ32210.1 599 VAVIGGVGCGKSSLLAAIAGDMR 621
                 89****************99733 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00042
                  EEEEESTTSSHHHHHHHHHT CS
    MMR_HSR1    2 vaivGrpNvGKStLinaltg 21  
                   ++vGr+ +GKS+++ +l++
  KHJ32210.1 1195 LGVVGRTGAGKSSIMMTLFR 1214
                  69*************99987 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   0.00085       0.9       9      40 ..     583     617 ..     582     618 .. 0.91
   2 ?    5.3   0.0     0.024        25      24      37 ..    1197    1210 ..    1195    1214 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00085
      AAA_23   9 sfrdqeidF...skgltlItGpNGaGKTTildAik 40 
                 +f+ q+i++    + l++++G  G+GK+++l Ai 
  KHJ32210.1 583 PFQLQDINLvigRNELVAVIGGVGCGKSSLLAAIA 617
                 578899999999899******************95 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.024
      AAA_23   24 ItGpNGaGKTTild 37  
                  ++G +GaGK++i+ 
  KHJ32210.1 1197 VVGRTGAGKSSIMM 1210
                  58**********95 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0    0.0005      0.53      92     130 ..     588     627 ..     550     634 .. 0.83
   2 ?    5.2   0.2     0.017        18     103     128 ..    1196    1221 ..    1186    1227 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.0005
                  HHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S-- CS
  RsgA_GTPase  92 elkellkd.ktsvlvGqSGvGKStLinallpelelktgev 130
                  +++ ++   ++++++G  G GKS+L+ a++++++   ge+
   KHJ32210.1 588 DINLVIGRnELVAVIGGVGCGKSSLLAAIAGDMRKTNGEL 627
                  5555554448999******************987776665 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.017
                   EEECSTTSSHHHHHHHHCTT-----S CS
  RsgA_GTPase  103 vlvGqSGvGKStLinallpelelktg 128 
                    +vG +G+GKS+++ +l    el+ g
   KHJ32210.1 1196 GVVGRTGAGKSSIMMTLFRLVELSAG 1221
                   579**********9998776666555 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.3    0.0051       5.4      25      45 ..     597     617 ..     590     633 .. 0.88
   2 ?   -1.3   0.0       1.2   1.2e+03     135     211 ..     674     764 ..     644     770 .. 0.69
   3 ?    4.0   0.1     0.028        29      28      49 ..    1196    1216 ..    1186    1223 .. 0.84
   4 !    6.9   0.2    0.0035       3.6     136     209 ..    1306    1375 ..    1267    1381 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0051
                 SEEEEEESTTSSHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  25 sftaivGpNGSGKsnlldAil 45 
                 ++ a++G  G+GKs+ll Ai 
  KHJ32210.1 597 ELVAVIGGVGCGKSSLLAAIA 617
                 6789***************94 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.2
                 T.................CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHH.HHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEEEE CS
                 x.................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 135 e.................lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDekn.vkkvaellkeksknaQfivislreemlekadklvgv 211
                 +                 ++SgG+k+ + +a       +  + + l+D+  +a D++  ++++ + + +  k+   i  +++  +l k+d++v +
  KHJ32210.1 674 DletfpfgdmteigergvTISGGQKQRINIA----RAIYFDSKIILMDDPLSAVDAHVgRQIFDHAILKLMKDRSRILATHQLWVLDKCDRIVLM 764
                 4555555555555555557899999876655....344667778999999999998752666777888888888888888888888888888765 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.028
                  EEEESTTSSHHHHHHHHHHHCT CS
                  xxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N   28 aivGpNGSGKsnlldAilFvLG 49  
                   +vG+ G+GKs+++  + F L 
  KHJ32210.1 1196 GVVGRTGAGKSSIMMTL-FRLV 1216
                  59************998.7765 PP

  == domain 4  score: 6.9 bits;  conditional E-value: 0.0035
                  CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklv 209 
                  ++S G+++L+ala       v+++ +++ De  +  D +   k+ + + ++ k   +++i++r +++ + d+++
  KHJ32210.1 1306 NFSLGQRQLMALARA----LVRKSRIVICDEATSSVDMETDIKIQQTMITAFKGITLLCIAHRLKTIINYDRIC 1375
                  7899*****998754....578889999*******************99**************99999888765 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0032       3.4      20      42 ..     594     616 ..     584     620 .. 0.82
   2 !    6.7   0.1    0.0056       5.9      18      39 ..    1188    1209 ..    1181    1215 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0032
      AAA_29  20 dlkgatlltGpsGsGKSTllDAi 42 
                  +++ + ++G  G GKS+ll Ai
  KHJ32210.1 594 GRNELVAVIGGVGCGKSSLLAAI 616
                 45567899************887 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0056
      AAA_29   18 eidlkgatlltGpsGsGKSTll 39  
                  +++  +   ++G++G+GKS+++
  KHJ32210.1 1188 HVKSGERLGVVGRTGAGKSSIM 1209
                  55533466799*********98 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.34   3.6e+02      26      44 ..     599     617 ..     584     627 .. 0.82
   2 ?   12.9   0.4   8.5e-05     0.089      24      59 ..    1193    1226 ..    1185    1228 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.34
       DUF87  26 lAilgsTGsGKSntvavLl 44 
                 +A++g  G GKS + a + 
  KHJ32210.1 599 VAVIGGVGCGKSSLLAAIA 617
                 8*************99886 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 8.5e-05
       DUF87   24 rHlAilgsTGsGKSntvavLleellekkgatililD 59  
                  ++l+++g+TG+GKS  +  L++ l+ + +a  +++D
  KHJ32210.1 1193 ERLGVVGRTGAGKSSIMMTLFR-LV-ELSAGSIVID 1226
                  679***************9975.67.6666666666 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0    0.0039       4.1      10      53 ..     589     631 ..     583     640 .. 0.76
   2 ?    5.0   0.0     0.017        18      21      48 ..    1195    1222 ..    1186    1227 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0039
      AAA_30  10 vealltsgdrvavltGpAGtGKttalkalreaweaaggrviglA 53 
                 ++ +++ +  ++++ G+ G GK+ +l+a++  +++ +g++ + A
  KHJ32210.1 589 INLVIGRN-ELVAVIGGVGCGKSSLLAAIAGDMRKTNGELKLGA 631
                 55555555.599999**************998888866666555 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.017
      AAA_30   21 avltGpAGtGKttalkalreaweaaggr 48  
                    ++G+ G+GK+ ++ +l +++e + g+
  KHJ32210.1 1195 LGVVGRTGAGKSSIMMTLFRLVELSAGS 1222
                  5689***********9998888876444 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.053        55      27      59 ..     590     622 ..     588     640 .. 0.83
   2 ?    8.5   0.0    0.0013       1.3      27      57 ..    1186    1216 ..    1177    1232 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.053
       AAA_7  27 elllknkkpvllvGptGtGKtviikdllkkldk 59 
                 +l++ ++  v ++G +G+GK++++  +   + k
  KHJ32210.1 590 NLVIGRNELVAVIGGVGCGKSSLLAAIAGDMRK 622
                 56778888999***********99988777664 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0013
       AAA_7   27 elllknkkpvllvGptGtGKtviikdllkkl 57  
                  +l++k++  + +vG tG GK++i+++l++ +
  KHJ32210.1 1186 SLHVKSGERLGVVGRTGAGKSSIMMTLFRLV 1216
                  68999999****************9976644 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   0.00098         1       1      21 [.     599     619 ..     599     626 .. 0.92
   2 ?    3.3   0.1     0.073        77       2      16 ..    1196    1210 ..    1195    1219 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00098
                 EEEEEBTTTTHHHHHHHHHTS CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlge 21 
                 +av+G +  GKSS+l a+ g+
  KHJ32210.1 599 VAVIGGVGCGKSSLLAAIAGD 619
                 89****************996 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.073
                  EEEEBTTTTHHHHHH CS
   Dynamin_N    2 avvGsqSsGKSSvln 16  
                   vvG + +GKSS++ 
  KHJ32210.1 1196 GVVGRTGAGKSSIMM 1210
                  79**********975 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   0.00042      0.44       2      32 ..     598     628 ..     597     659 .. 0.72
   2 ?    0.3   0.0      0.56   5.9e+02       5      22 ..    1197    1214 ..    1193    1220 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00042
                 CEEEEC-TTTCHHHHHHHHHHHHCTS-SCCC CS
       NACHT   2 lvilqGeaGsGKTtLlqklalawaegklpqg 32 
                 lv++ G  G+GK+ Ll+ +a ++++ + + +
  KHJ32210.1 598 LVAVIGGVGCGKSSLLAAIAGDMRKTNGELK 628
                 799*****************99999876654 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.56
                  EEC-TTTCHHHHHHHHHH CS
       NACHT    5 lqGeaGsGKTtLlqklal 22  
                  + G+ G GK+  +  l +
  KHJ32210.1 1197 VVGRTGAGKSSIMMTLFR 1214
                  89*********9999876 PP

>> Marek_SORF3  Marek's disease-like virus SORF3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00018      0.19      36     113 ..    1305    1382 ..    1285    1394 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00018
  Marek_SORF3   36 devaesiviflearerlallcaisineGsvssfdiakdlwdalvilaayrffammdkmfsietisaaeeidltetGkl 113 
                    +++++ ++++     l     i i + + ss+d++ d+  +  +++a++ ++++     ++ti +++ i+++e G++
   KHJ32210.1 1305 SNFSLGQRQLMALARALVRKSRIVICDEATSSVDMETDIKIQQTMITAFKGITLLCIAHRLKTIINYDRICVLERGNI 1382
                   3589999999998778888999999999***********************************************986 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.8       8.1   8.6e+03     251     282 ..     539     568 ..     483     581 .. 0.43
   2 ?    7.0   0.0     0.004       4.2      14      43 ..     586     616 ..     585     712 .. 0.84
   3 ?    5.0   0.0     0.016        16      28      78 ..    1197    1243 ..    1191    1333 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 8.1
      AAA_15 251 eidkklaeelkkilkkkidkikkfnykgkkne 282
                 +   k+  ++ ++ k +  + k++  ++ ++e
  KHJ32210.1 539 DSRTKF--HYMEVAKINTLQNKDERLPNPTSE 568
                 222222..222222222222222222222222 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.004
      AAA_15  14 lkdveidlsee.ltvliGkNnsGKSsileal 43 
                 l+d+ + +  + l  +iG  ++GKSs+l a+
  KHJ32210.1 586 LQDINLVIGRNeLVAVIGGVGCGKSSLLAAI 616
                 56666777666699****************9 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.016
      AAA_15   28 liGkNnsGKSsilealdlFlnnkekknkkvikiekedleifeniseskdik 78  
                  ++G+ ++GKSsi++ l  + + +       i+i++ d+++    +   ++ 
  KHJ32210.1 1197 VVGRTGAGKSSIMMTLFRLVELS----AGSIVIDNIDISTIGLHDLRSRLA 1243
                  69**************9999988....888999999998876666555555 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2       2.9     3e+03     157     217 ..     462     523 ..     437     591 .. 0.54
   2 ?    6.6   0.4    0.0055       5.8       2      20 ..     599     617 ..     598     634 .. 0.86
   3 ?   -2.0   0.0       2.3   2.4e+03     235     298 ..     689     751 ..     627     756 .. 0.68
   4 ?    5.1   0.1     0.016        17       3      23 ..    1196    1216 ..    1195    1263 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.9
      AAA_21 157 lldglrke.rigllnifadyfgfakekrllqrlvrslklveielsdlgegeeliasvderlr 217
                 l+++lr   + ++l i++ +  ++++ r+ + l+++ +++ + ++++ ++ ++i  +d+ + 
  KHJ32210.1 462 LFNSLRIPlNLLPLVISQTTDAWSSISRIQEFLLSEDLKNILQVDLEADVAVEIRNADFTWE 523
                 33333333444444444444444444444444444444444444444444444443333333 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0055
      AAA_21   2 nvliGpNgsGKSnLLdald 20 
                  ++iG  g+GKS+LL a+ 
  KHJ32210.1 599 VAVIGGVGCGKSSLLAAIA 617
                 689**************94 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 2.3
      AAA_21 235 rel..SdGtkrllalltallralkkgsllliDEpEngLHPkllrrll.....ellkelsrngaQviltTHS 298
                 r +  S G+k+ + ++ a++ +    +++l D+p +  + ++ r ++     +l+k+ sr     il+TH+
  KHJ32210.1 689 RGVtiSGGQKQRINIARAIYFDS---KIILMDDPLSAVDAHVGRQIFdhailKLMKDRSR-----ILATHQ 751
                 44455888888888888888877...8999999999999966655555333377777777.....888886 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.016
      AAA_21    3 vliGpNgsGKSnLLdaldlla 23  
                  +++G+ g+GKS+++ +l  l 
  KHJ32210.1 1196 GVVGRTGAGKSSIMMTLFRLV 1216
                  589**************7763 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1     0.055        58       7      25 ..     598     616 ..     593     622 .. 0.86
   2 ?   -1.8   0.2       3.2   3.4e+03      81     105 ..     735     765 ..     720     789 .. 0.60
   3 ?    4.3   0.0     0.044        47      10      29 ..    1197    1216 ..    1190    1258 .. 0.87
   4 ?   -1.2   0.0       2.1   2.3e+03      81     102 ..    1316    1335 ..    1274    1358 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.055
      AAA_22   7 ilvvtGesGtGKTtllrrl 25 
                 +++v+G +G+GK+ ll+ +
  KHJ32210.1 598 LVAVIGGVGCGKSSLLAAI 616
                 789***********99865 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 3.2
      AAA_22  81 aleqalrarav....ielliiDEaqhlr..s 105
                 a+ + +++r++    ++l ++D  +++   +
  KHJ32210.1 735 AILKLMKDRSRilatHQLWVLDKCDRIVlmK 765
                 4444444444455559*******99975553 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.044
      AAA_22   10 vtGesGtGKTtllrrlleql 29  
                  v+G +G+GK+  + +l++  
  KHJ32210.1 1197 VVGRTGAGKSSIMMTLFRLV 1216
                  89**********99998865 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 2.1
      AAA_22   81 aleqalraravielliiDEaqh 102 
                  al++al ++++  ++i DEa  
  KHJ32210.1 1316 ALARALVRKSR--IVICDEATS 1335
                  44455555555..9*****965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       791  (0.0441185); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.93u 0.32s 00:00:01.25 Elapsed: 00:00:00.47
# Mc/sec: 9036.07
//
Query:       KHJ32211.1  [L=423]
Description: putative methylthioribose-1-phosphate isomerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-76  256.7   0.1    4.3e-76  255.8   0.1    1.4  1  IF-2B     Initiation factor 2 subunit family


Domain annotation for each model (and alignments):
>> IF-2B  Initiation factor 2 subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.8   0.1   2.4e-80   4.3e-76       1     279 [.      45     396 ..      45     398 .. 0.96

  Alignments for each domain:
  == domain 1  score: 255.8 bits;  conditional E-value: 2.4e-80
                 SS-SHHHHHHHHHHHHHHHHHHCC..CSTHHHHHHHHHHHHHHHHTSSTS-HHHHHHHHHHHH......HHHCCTTTSSHHHHHHHHHHHHHHHHHHHH CS
       IF-2B   1 kvrGspaiaiaalevllevikdak..tskvaeLkeelrkaidlLkkarPtavslgnairrllk......eiselksssdvkeakksliekikelikeie 91 
                 +vrG+paia++a+ +l  +++++    +  ++L +++++++d+L ++rPtav+l+nai+ l++        s ++ss+d +e++k++ie++++++++++
  KHJ32211.1  45 QVRGAPAIALVAALSLSVELERKAdgSTSKEDLLKYINSRLDYLLESRPTAVDLSNAIQTLKQvshvasLNSTSNSSQDCDEIRKAYIERAEQILQDDL 143
                 79**************9998877766788899*******************************99887644667889999999**************** PP

                 HHHHHHHHHHHTTC...................................-TTEEEEEES--SH........HHHHHHHHHHTTEEEEEEEEEXTTTTHH CS
       IF-2B  92 eadekigdiaaeli...................................kdgdtilTicnskt........vlevlraaakekkkfkVivvEsrPrlqG 147
                  ++ +ig+++ae++                                     ++ +lT+cn+++        +l+++r++++ ++  +V+ +E+rP++qG
  KHJ32211.1 144 LTNLAIGRHGAEYLreqqlpvkkvisdeessqyyrlstypdsngetgptYRKFSVLTHCNTGSlatsghgtALGIIRSLKHMNYLEHVYFTETRPYNQG 242
                 ************************************************9999*********************************************** PP

                 .HTHHHHHHHTTXEEEEEEGGGHHHHHHC.....TESEEEEEXSEEETTSEEEEETTHHHHHHHHHHTTXEEEEEXXGGGBESTSSSGGGSSXXBEXTH CS
       IF-2B 148 .rltakeLvqagipvtlitdsavayvmse.....evdkvivGAdrilenGaiankiGTsslAvlAkefnipvlvvaeslkfservqldedifieerdpe 240
                  rlta eLv+++ip+tlitds++++++ +     ++++vivGAdr+++nG++ankiGT+slA+lA+ + i++ v+a+s+ ++  ++ ++ i ieer+p 
  KHJ32211.1 243 aRLTAFELVHESIPSTLITDSMAGALFAQkinekNISAVIVGADRVARNGDTANKIGTYSLAILARYHGIKFVVAAPSTSIDLHTESGASINIEERKPT 341
                 **************************987677789**************************************************************** PP

                 HHHEETTEESSTT................TEEEEEBSEEEEEGGGXSEEEETTEE CS
       IF-2B 241 ellnitgeriaee................elkvvnpafDvtPpelItliITevGv 279
                 el++++g+ + ++                +++v+npafDvtP +lI++iITe G 
  KHJ32211.1 342 ELIQVSGPVVDKNgqvdtsqvfriasadqRTNVWNPAFDVTPSSLIDAIITERGK 396
                 *******9997779***************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       666  (0.0371465); expected 358.6 (0.02)
Passed bias filter:                      555  (0.0309554); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3117.15
//
Query:       KHJ32212.1  [L=536]
Description: putative sucrose transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-12   45.8   6.6      3e-12   45.8   6.6    2.0  3  MFS_2       MFS/sugar transport protein
    0.00053   19.0   2.6    0.00053   19.0   2.6    1.8  2  MFS_1_like  MFS_1 like family


Domain annotation for each model (and alignments):
>> MFS_2  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.8   6.6   3.3e-16     3e-12       7     199 ..      27     227 ..      23     254 .. 0.79
   2 ?   -3.2   0.8      0.26   2.3e+03     292     312 ..     364     382 ..     345     410 .. 0.49
   3 ?   -2.5   0.1      0.16   1.4e+03     143     162 ..     465     484 ..     455     527 .. 0.54

  Alignments for each domain:
  == domain 1  score: 45.8 bits;  conditional E-value: 3.3e-16
       MFS_2   7 laanilsvllatylliFytdvlglsaalvglvllvarlvDaitDpivGtlidktstrwGrrrPwlllsaiilavsiillftppelsqs..........a 95 
                 +++++++ +  ty ++++ +  gl+ ++ +lv ++  +  +++ pivG+++d+++ r+GrrrP++l++ ++ a++++ l ++ e+  s           
  KHJ32212.1  27 VGIQFTWGIEMTYCTPYLLSL-GLTKSRTSLVWIAGPISGLFMQPIVGVIADRSKSRYGRRRPFMLVGSVVVAMGLLSLGWAKEIASSliedielrksM 124
                 7999**************987.*********************************************************9999998889******9954 PP

       MFS_2  96 kfiwllvtyillrilytlfeipyvslvpvltkdydeRtsltsvrsflsvlggvlaailafllvlilgglkserkgylifaliialLmllgviivvlgtk 194
                 ++  ++++  +++ ++++++ +  +l++   + +++ +  +   +++s +  v+ ai +  lv ilg  ++ ++ +  +++i al  l+++ ++++++ 
  KHJ32212.1 125 TIGIAILAIYVVDFAVNAVQACCRALIVDTLPMSKQQLGSAWGSRMVSGGHLVGYAIGTLDLVNILGP-SLGNSQFKQLTVISALALLFTTSVTSWAVT 222
                 444455555557*************9987766666666555555667777777788888888888886.666777766666666555555555555555 PP

       MFS_2 195 ervem 199
                 er  +
  KHJ32212.1 223 ERILV 227
                 55444 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.26
       MFS_2 292 yllgalltivllvlvlllqps 312
                 +++g++l i+ ++++ ++  +
  KHJ32212.1 364 WMCGQSLFISTMIFTPFA--R 382
                 333333333333333333..1 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.16
       MFS_2 143 svlggvlaailafllvlilg 162
                 +++  ++++++ ++++++l+
  KHJ32212.1 465 TTIPQFIGTFISMTVFAVLE 484
                 34444455555555554444 PP

>> MFS_1_like  MFS_1 like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   2.6   5.9e-08   0.00053      20     193 ..      38     215 ..      29     287 .. 0.70
   2 ?   -2.1   0.0      0.15   1.4e+03      48      77 ..     371     400 ..     343     491 .. 0.58

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 5.9e-08
  MFS_1_like  20 PYltiylkskglkaseigiitlilpltsilsppiwgvlaDrfgkrkk....vvilslllsavlflsllfippskerqeesklevsvaqdvdaektfwil 114
                  Y t yl s gl+ s   ++  + p+  ++ +pi+gv+aDr++ r       ++   + s+v+ ++ll +        e  + +    ++ ++ t+ i 
  KHJ32212.1  38 TYCTPYLLSLGLTKSRTSLVWIAGPISGLFMQPIVGVIADRSKSRYGrrrpFML---VGSVVVAMGLLSLG----WAKEIASSLIEDIELRKSMTIGIA 129
                 599*************************************98877763222444...44455555555333....344555556666666688888888 PP

  MFS_1_like 115 fllvvlasfflaailvlldaatlkel....gedrkdyGrqrlfGs..vGyai....fafitGilidhysvnllpysallyvlaallvis 193
                 +l + + +f  +a+ +   a++  +l    ++    +G   + G   vGyai     + i+G  +  +++++l    ++  la+l+++s
  KHJ32212.1 130 ILAIYVVDFAVNAVQACCRALIVDTLpmskQQLGSAWGSRMVSGGhlVGYAIgtldLVNILGPSLGNSQFKQLT---VISALALLFTTS 215
                 99999999999999999999999999654222333366666666455777762222334555555555555444...233333333333 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.15
  MFS_1_like  48 ilsppiwgvlaDrfgkrkkvvilslllsav 77 
                 ++s  i+++ a  f+  +++++l+ l +++
  KHJ32212.1 371 FISTMIFTPFARSFKFATTLIALCGLPWLL 400
                 455555555555555555555555443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       554  (0.0308997); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3879.73
//
Query:       KHJ32213.1  [L=434]
Description: putative dynactin subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-84  284.6  16.3    1.8e-84  284.4  16.3    1.0  1  Dynamitin       Dynamitin
     0.0032   17.7  11.1      0.024   14.9   0.8    3.5  3  Rx_N            Rx N-terminal domain
     0.0051   16.6   4.6          1    9.1   0.2    2.7  2  HD_4            HD domain
  ------ inclusion threshold ------
      0.021   14.8   0.6      0.021   14.8   0.6    3.1  3  YscO            Type III secretion protein YscO
       0.23   11.7  20.5       0.21   11.8   1.8    3.3  3  Jnk-SapK_ap_N   JNK_SAPK-associated protein-1
       0.27   11.3  13.6       0.47   10.5   0.7    3.3  3  DUF1664         Protein of unknown function (DUF1664)
        0.3   11.4  14.5        4.9    7.5   0.4    3.3  3  OmpH            Outer membrane protein (OmpH-like)
       0.36   10.6  12.2       0.38   10.6   1.1    3.3  3  SKA1            Spindle and kinetochore-associated protein 1
        1.2    7.9  22.6       0.91    8.3   3.8    3.1  3  Spc7            Spc7 kinetochore protein
        1.4    8.5  11.9        2.4    7.7   0.5    3.5  3  Fzo_mitofusin   fzo-like conserved region
        1.9    8.7  14.5        5.7    7.1   1.8    3.4  3  Fib_alpha       Fibrinogen alpha/beta chain family
        2.3    8.7  23.5        2.6    8.6   3.2    3.4  3  APG6_N          Apg6 coiled-coil region
        2.4    8.2   6.0         39    4.3   0.1    3.3  3  Baculo_PEP_C    Baculovirus polyhedron envelope protein, PEP,
        2.5    8.0   8.0        1.1    9.1   1.3    2.5  2  DUF3395         Domain of unknown function (DUF3395)
        2.8    8.1   6.9       0.75    9.9   0.3    3.0  3  GvpK            Gas vesicle protein K
        3.6    8.0  13.7       0.97    9.8   0.1    4.3  5  Syntaxin_2      Syntaxin-like protein
        4.5    7.6   6.5         12    6.2   0.4    3.5  3  DUF948          Bacterial protein of unknown function (DUF948
        6.3    6.9  13.3         14    5.7   3.0    3.2  3  DUF4337         Domain of unknown function (DUF4337)
        6.3    6.6  18.0          3    7.6   1.5    3.4  3  DUF724          Protein of unknown function (DUF724)
        8.2    5.6  15.4        8.5    5.5   1.1    3.1  3  TMPIT           TMPIT-like protein


Domain annotation for each model (and alignments):
>> Dynamitin  Dynamitin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  284.4  16.3     2e-87   1.8e-84       1     388 []      18     427 ..      18     427 .. 0.87

  Alignments for each domain:
  == domain 1  score: 284.4 bits;  conditional E-value: 2e-87
   Dynamitin   1 qpDvYETpDlpeddstekesskeseseeelesed........iersslnpneArskFkgkkvdakgvDFsdriskkertgykasssreyeladege... 88 
                 +pDvYETp+l++d+st   + ++ses+  ++++d        i++s+l   eAr +F+++ +da++vDFsdr+++k r++ykass++ ++  +++    
  KHJ32213.1  18 APDVYETPELTDDNSTTVGR-ARSESNASSRENDfaetdrcgISKSRLPFHEARLQFAPAIIDAQNVDFSDRLTAK-RKSYKASSRNLRKRESDTLqle 114
                 79**********98887654.566666555555577888*************************************.*****99887777766665899 PP

   Dynamitin  89 .....eketleqklqRLqrEveeleeEvekakeaakeseeeeldpvelaeqleslqkqLeeleellgedsaa.sltdaqealakrllsqleefkeskaa 181
                      e+e++ +kl+RL+rEvee++e +++a +++++   ++   v+l ++++ l+k L+e+        ++ ++t  q+  +k + +  +++k + ++
  KHJ32213.1 115 dssdeETESFGKKLARLKREVEEIKE-ISRAWAEKET--TNQDGIVDLGADVSALSKALDEI--------SClQMTGRQSHISKLTKDLGSGIKVNRSP 202
                 99**9******************975.5555555543..3344458999*************........33234433444444444444556666677 PP

   Dynamitin 182 skkkeksnkityelyyapeqeksqqlakiaelekRLaeLEklvGlssesldelsanlkprplletlsrLeaklslL...qtahLDaierRlksllaeld 277
                 ++++ +++ +ty+++yap +++s++lak+a+++ RLa+LEk++G++  +  +l +n++ ++++++l++L++++s+L    +++LD i+r +++l++e++
  KHJ32213.1 203 HRSQCDEEPATYTVTYAPVYQQSHALAKAANFDSRLAMLEKVLGINAVDELSLIDNGSRKAVIPSLEKLQKQVSVLsnsTPSSLDGISREIRKLTQEAQ 301
                 77778899***************************************88666667888*******************999******************* PP

   Dynamitin 278 elaekreaiekadaeg...............qekKIneLYellkrldplspilPavldRLrsLraLHeeAaefsqtLteleeeqkeiseelkslkelLe 361
                 +l+ +r+a++ a+ +                   K+n+LY+ l+ ++++ pilP++ldRL+sLra+H++Aa+ ++ L+++++eq ei++++k+++e+L+
  KHJ32213.1 302 KLESARKAANIAQKTMnkdeeltpkieedseLVMKLNALYGALPVIEKMRPILPSLLDRLHSLRAIHASAATTKSALDKIDREQLEIADDIKKWQEGLS 400
                 ******998777777699***********99778***************************************************************** PP

   Dynamitin 362 kveeslkenletvkkNvesleerikkL 388
                  +e++++e+++t+++N+  ++e++kkL
  KHJ32213.1 401 RMEKTMSEAEATMNSNIRFMNEWMKKL 427
                 *************************98 PP

>> Rx_N  Rx N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.4     0.055        49      18      52 ..     119     153 ..     105     179 .. 0.86
   2 ?    4.1   0.2     0.061        55       7      49 ..     272     315 ..     263     329 .. 0.76
   3 !   14.9   0.8   2.7e-05     0.024      13      63 ..     378     429 ..     354     433 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.055
        Rx_N  18 kllkgvkeeleklkdeLesiqavLedaeerqikde 52 
                 +  +++ ++l +lk+e e i+ + +   e++++++
  KHJ32213.1 119 EETESFGKKLARLKREVEEIKEISRAWAEKETTNQ 153
                 556778899***************99999999885 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.061
        Rx_N   7 qkLadllaeea.kllkgvkeeleklkdeLesiqavLedaeerqi 49 
                 qk  ++l++   ++l g+ +e++kl +e +++++  + a   q 
  KHJ32213.1 272 QKQVSVLSNSTpSSLDGISREIRKLTQEAQKLESARKAANIAQK 315
                 34445555555899**************9999988888776555 PP

  == domain 3  score: 14.9 bits;  conditional E-value: 2.7e-05
        Rx_N  13 laeeakllkgvkeeleklkdeLesiqavLedaeerqikd.eavkeWlkelrd 63 
                 l +  + + ++ ++++k+++ L++++  +++ae   + +   ++eW+k+l +
  KHJ32213.1 378 LDKIDREQLEIADDIKKWQEGLSRMEKTMSEAEATMNSNiRFMNEWMKKLEE 429
                 44444789999***********************7776648899*****987 PP

>> HD_4  HD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.2    0.0011         1      55      87 ..     116     148 ..     106     179 .. 0.81
   2 !    8.4   0.6    0.0019       1.7      67     144 ..     293     387 ..     284     390 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0011
        HD_4  55 sleeirerfGeevarLvegvsklkrlqkvaaad 87 
                 s +e +e fG++ arL ++v+++k++++  a++
  KHJ32213.1 116 SSDEETESFGKKLARLKREVEEIKEISRAWAEK 148
                 45677899*******************994222 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0019
        HD_4  67 varLvegvsklkrlqkva............aadeaeekaeqvenlRkmL..lAmveDirvvliklAdrlqtlrsl...aaakeekrrdvaretld 144
                 + +L+++++kl+  +k a             + + ee++e v +l +++  l ++e +r +l +l drl++lr++   aa+++ +  ++ re l+
  KHJ32213.1 293 IRKLTQEAQKLESARKAAniaqktmnkdeeLTPKIEEDSELVMKLNALYgaLPVIEKMRPILPSLLDRLHSLRAIhasAATTKSALDKIDREQLE 387
                 556666666666666666666555555433344555556666677777644555999******************54333345566677777665 PP

>> YscO  Type III secretion protein YscO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   2.7     0.054        48      78     135 ..      96     153 ..      67     155 .. 0.82
   2 ?   14.8   0.6   2.3e-05     0.021      67     129 ..     267     329 ..     252     336 .. 0.90
   3 ?   -1.0   0.3       1.7   1.5e+03     107     142 ..     375     410 ..     361     429 .. 0.67

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.054
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YscO  78 LrekeaelekqveeakqqleaerealrqarkelqearraveKfaelarlvraeasrqq 135
                  ++ +++l k+  +  q ++   e+ ++  k+l+  +r+ve+++e  r +++ +  +q
  KHJ32213.1  96 YKASSRNLRKRESDTLQLEDSSDEETESFGKKLARLKREVEEIKEISRAWAEKETTNQ 153
                 5666777777777788888888889999999*******************99988776 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 2.3e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YscO  67 elekvkqqvalLrekeaelekqveeakqqleaerealrqarkelqearraveKfaelarlvra 129
                  lek+++qv+ L +   +  + + +  ++l++e+++l++ark+   a+++ +K +el  + ++
  KHJ32213.1 267 SLEKLQKQVSVLSNSTPSSLDGISREIRKLTQEAQKLESARKAANIAQKTMNKDEELTPKIEE 329
                 69***************************************************7777666555 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 1.7
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YscO 107 rkelqearraveKfaelarlvraeasrqqerkEeqe 142
                 + +l +  r++ ++a   +++++  sr  +   e+e
  KHJ32213.1 375 KSALDKIDREQLEIADDIKKWQEGLSRMEKTMSEAE 410
                 455666666666666666666666666555444444 PP

>> Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.8   0.00024      0.21      66     117 ..      96     147 ..      84     185 .. 0.77
   2 ?    3.8   2.4     0.068        61      32      93 ..     265     329 ..     262     344 .. 0.59
   3 ?    6.8   1.7    0.0083       7.4      38     109 ..     358     428 ..     348     434 .] 0.72

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00024
  Jnk-SapK_ap_N  66 yerekelrkraeeeleeiedqweeerkelqekveqleeenrelelkaknaad 117
                    y+      ++ e + +++ed+ +ee++ + +k+++l+ e++e++  +++ a+
     KHJ32213.1  96 YKASSRNLRKRESDTLQLEDSSDEETESFGKKLARLKREVEEIKEISRAWAE 147
                    44444555778899*************************9999944444433 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.068
  Jnk-SapK_ap_N  32 VkvLElLeslasrne.eeeaeleelreeleqLeteyerekelrkrae..eeleeiedqweeerke 93 
                    +  LE L + +s    +  + l+  ++e+ +L++e ++  ++rk+a+  ++ +++++++  + +e
     KHJ32213.1 265 IPSLEKLQKQVSVLSnSTPSSLDGISREIRKLTQEAQKLESARKAANiaQKTMNKDEELTPKIEE 329
                    55677777666654304445577777777777777777777777776666666665555444333 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0083
  Jnk-SapK_ap_N  38 LeslasrneeeeaeleelreeleqLeteyerekelrkraeeeleeiedqweeerkelqekveqleeenrele 109
                    L+ l+s + + +a +   + +l+++  e+ + + + k+ +e l ++e+++ e + ++++ +  ++e +++le
     KHJ32213.1 358 LDRLHSLR-AIHASAATTKSALDKIDREQLEIADDIKKWQEGLSRMEKTMSEAEATMNSNIRFMNEWMKKLE 428
                    55565554.666667777777777777777777778888888888888888888888888888888888777 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.7   0.00053      0.47      28     112 ..      85     172 ..      79     182 .. 0.80
   2 ?    2.4   0.8      0.16   1.5e+02      39      86 ..     271     318 ..     262     350 .. 0.62
   3 ?    6.0   0.6     0.013        11      80     121 ..     369     410 ..     346     434 .] 0.50

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00053
     DUF1664  28 lsdlmfvTkrslsdavesvskq...leqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeaveg 112
                 +sd + + ++s +    ++ k+     q+ +s  +  + + ++++r+ ++++e keis++ +e+ t+ ++++ ++g dv+++++a  +
  KHJ32213.1  85 FSDRLTAKRKSYKASSRNLRKResdTLQLEDSSDEETESFGKKLARLKREVEEIKEISRAWAEKETTNQDGIVDLGADVSALSKALDE 172
                 667777777777666666655311123556777788899*****************************************99998765 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.16
     DUF1664  39 lsdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeik 86 
                 l++ v+ +s++  +  + +++  r+L+++ +++++  ++ + ++k ++
  KHJ32213.1 271 LQKQVSVLSNSTPSSLDGISREIRKLTQEAQKLESARKAANIAQKTMN 318
                 555566666666666666666666677776666655544444444443 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.013
     DUF1664  80 eiskeikeevtevredlseigedvesvkeaveglesklerie 121
                 + ++ +k+ ++++ ++  ei +d+++ +e  + +e+++++ e
  KHJ32213.1 369 ASAATTKSALDKIDREQLEIADDIKKWQEGLSRMEKTMSEAE 410
                 333344444444444444444444444444444444443333 PP

>> OmpH  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   1.0     0.018        16      25      85 ..      79     143 ..      71     173 .. 0.68
   2 ?    7.5   0.4    0.0055       4.9      58     107 ..     286     336 ..     259     354 .. 0.53
   3 ?    6.2   1.2     0.014        13      12      57 ..     369     415 ..     363     433 .. 0.65

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.018
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS.....-HHHHHH.HHHHHHHHHHHHHHHHHHHHH CS
        OmpH  25 ekkfkklqaeleakekelqklqeelqkkakkl.e...keekeqe.lqkkeqelqqkqqqkaqelqk 85 
                 +++  ++ + l+ak+k++++  ++l k++++  +   + ++e e + kk ++l++   ++ +e+ +
  KHJ32213.1  79 DAQNVDFSDRLTAKRKSYKASSRNLRKRESDTlQledSSDEETEsFGKKLARLKR-EVEEIKEISR 143
                 5666677788999999999999999877777666877444444467777777777.3333344443 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0055
                 -HHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        OmpH  58 keekeqelqkkeqelqqkqqqka.qelqkkqqellkpildkinkaikevak 107
                      +e++k+ qe q++ ++++  ++++k     ++++ ki++  + v+k
  KHJ32213.1 286 LDGISREIRKLTQEAQKLESARKaANIAQKTMNKDEELTPKIEEDSELVMK 336
                 333345566666666663333334444444444444566666666555555 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.014
                 HHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS.. CS
        OmpH  12 eespegkaaqeqlekkfkklqaeleakekelqklqeelqkkakkl.e 57 
                 ++   +k+a +++++++ ++++++++ ++ l ++++++ ++++++ +
  KHJ32213.1 369 ASAATTKSALDKIDREQLEIADDIKKWQEGLSRMEKTMSEAEATMnS 415
                 55667889999999999777777777777777777777655555433 PP

>> SKA1  Spindle and kinetochore-associated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1     0.098        88       2      58 ..     135     190 ..      91     213 .. 0.81
   2 ?    3.8   0.7      0.05        45       5      56 ..     271     317 ..     222     344 .. 0.53
   3 ?   10.6   1.1   0.00042      0.38       5      78 ..     358     432 ..     356     434 .] 0.92

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.098
                 XXXXXX................XXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXX CS
        SKA1   2 iselrelvslrainqdpallkedlskieaevsaleellnklk.kelqeeeeaikklkk 58 
                 + e++e+  ++   +++++ +  + +++a+vsal + l+++   ++   ++ i+kl+k
  KHJ32213.1 135 VEEIKEISRAW--AEKETTNQDGIVDLGADVSALSKALDEIScLQMTGRQSHISKLTK 190
                 56788866666..788888899999999999999999999972234444555555554 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.05
                 XXX................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        SKA1   5 lrelvslrainqdpallkedlskieaevsaleellnklkkelqeeeeaikkl 56 
                 l++ vs+   n++p+     l  i+ e++ l++  +kl+ + +  + a+k++
  KHJ32213.1 271 LQKQVSVL-SNSTPS----SLDGISREIRKLTQEAQKLESARKAANIAQKTM 317
                 22222222.122222....244444444444444444433322222211111 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00042
                 XXX................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXX CS
        SKA1   5 lrelvslrainqdpallkedlskieaevsaleellnklkkelqeeeeaikklkkeieaslkqqek.lqhlkenlp 78 
                 l +l slrai+ + a++k+ l ki+ e  ++ + ++k ++ l + e++++++++ ++  ++  ++ +++l+en+ 
  KHJ32213.1 358 LDRLHSLRAIHASAATTKSALDKIDREQLEIADDIKKWQEGLSRMEKTMSEAEATMNSNIRFMNEwMKKLEENMT 432
                 567889**************************************************9999988888999988875 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   3.8     0.001      0.91     194     282 ..      81     170 ..      68     191 .. 0.85
   2 ?    3.4   2.9     0.032        29     158     207 ..     268     315 ..     223     351 .. 0.56
   3 ?    6.6   3.2    0.0035       3.1     152     252 ..     328     429 ..     318     434 .] 0.66

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.001
        Spc7 194 esid.keeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwsesevsrlkeevkaleelt 282
                 +++d +++L + r++ ++ + ++++++ ++ +l++  +e +e++ +  ++ ++  eei+e  r   e++  +++ +  l + v+al + +
  KHJ32213.1  81 QNVDfSDRLTAKRKSYKASSRNLRKRESDTLQLEDSSDEETESFGKKLARLKREVEEIKEISRAWAEKETTNQDGIVDLGADVSALSKAL 170
                 678888999999999999999999999999999999999999999999999999999999999999999999999999999999997754 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.032
        Spc7 158 LekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelree 207
                 Lek +++++ l +++ +  + +++e++kl ++a++les  k+  +++ ++
  KHJ32213.1 268 LEKLQKQVSVLSNSTPSSLDGISREIRKLTQEAQKLESARKA--ANIAQK 315
                 444444444444444444444444444444444443332211..111111 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0035
        Spc7 152 eedkelLekqeeeldellpeleeeka...eleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqksele 247
                 eed+el++k  + l  +lp +e+ +    +l ++l++l++ ++  ++ +k  L ++ +e  e+  +i++ ++ l+++++ + e e+++++    ++e++
  KHJ32213.1 328 EEDSELVMK-LNALYGALPVIEKMRPilpSLLDRLHSLRAIHA-SAATTKSALDKIDREQLEIADDIKKWQEGLSRMEKTMSEAEATMNSNIRFMNEWM 424
                 444444444.444444445444444411166666666666443.4667788888888888888888888889999999999988888888888888888 PP

        Spc7 248 eeiae 252
                 ++++e
  KHJ32213.1 425 KKLEE 429
                 88776 PP

>> Fzo_mitofusin  fzo-like conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.4     0.087        78      92     136 ..      99     143 ..      81     152 .. 0.79
   2 ?    7.7   0.5    0.0027       2.4      98     150 ..     270     315 ..     253     331 .. 0.64
   3 ?    4.1   0.5     0.033        30     109     150 ..     380     421 ..     363     433 .. 0.60

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.087
  Fzo_mitofusin  92 shqvqqelsstfarlcqqvdetekeleeeikelekeiekleevqk 136
                    s    ++ +s   +l+ ++de ++++ +++++l++e+e+++e+++
     KHJ32213.1  99 SSRNLRKRESDTLQLEDSSDEETESFGKKLARLKREVEEIKEISR 143
                    4444455556666899999********************999876 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0027
  Fzo_mitofusin  98 elsstfarlcqqvdetekeleeeikelekeiekleevqkkakllrnkaslles 150
                    +l++ ++ l+++   + + +++ei++l++e +kle++ k a++        ++
     KHJ32213.1 270 KLQKQVSVLSNSTPSSLDGISREIRKLTQEAQKLESARKAANIA-------QK 315
                    45566666666666666666777777777777777666555433.......33 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.033
  Fzo_mitofusin 109 qvdetekeleeeikelekeiekleevqkkakllrnkaslles 150
                    ++d+ + e+ ++ik+ ++ ++++e++ ++a++  n   ++ +
     KHJ32213.1 380 KIDREQLEIADDIKKWQEGLSRMEKTMSEAEATMNSNIRFMN 421
                    566666666777777777777777766666554444333333 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.2      0.13   1.1e+02      27      69 ..     118     153 ..      80     195 .. 0.63
   2 ?    7.1   1.8    0.0064       5.7      31     102 ..     262     332 ..     257     347 .. 0.74
   3 ?    6.3   1.0     0.011        10      32     119 ..     373     432 ..     345     434 .] 0.47

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.13
                 CCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  27 lkyekdvkkdlekleneleeisnstkeaeelvkeikdslrekq 69 
                 ++  +++ k+l++l++e+eei       +e++++  ++ + +q
  KHJ32213.1 118 DEETESFGKKLARLKREVEEI-------KEISRAWAEKETTNQ 153
                 333344444444444444444.......444444444444444 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0064
                 CCCCHHHCCCCCCCCCCCCHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHH CS
   Fib_alpha  31 kdvkkdlekleneleeisnst.keaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqes 102
                 k v  +lekl+++++ +snst ++ + +++ei++ ++e+qk ++   ++ +  +k+++ + ++l  +i +  +
  KHJ32213.1 262 KAVIPSLEKLQKQVSVLSNSTpSSLDGISREIRKLTQEAQKLESA-RKAANIAQKTMN-KDEELTPKIEEDSE 332
                 567789**************93456778899*****999999984.666666666666.55666666665555 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.011
                 CCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  32 dvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesneqkiq 119
                 ++k  l+k+ +e  ei++  k+ +e  +++++++ e++++ +                            snir++ + ++++e++++
  KHJ32213.1 373 TTKSALDKIDREQLEIADDIKKWQEGLSRMEKTMSEAEATMN----------------------------SNIRFMNEWMKKLEENMT 432
                 333344444444444444444444444444444444444444............................455555555555555554 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   3.2    0.0029       2.6      20      80 ..      88     151 ..      82     173 .. 0.75
   2 ?    5.9   3.7     0.019        17      32     107 ..     268     339 ..     256     352 .. 0.67
   3 ?    5.1   1.7     0.035        31      55     101 ..     363     409 ..     356     432 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0029
      APG6_N  20 qaekerdaYeeflkklkkekkeeek....qdeeleeleeeleklekeeeelleeLkelekereel 80 
                 +++++r++Y++  ++l+k+++++ +    +dee+e+  ++l++l++e ee ++e+ ++ +e+e  
  KHJ32213.1  88 RLTAKRKSYKASSRNLRKRESDTLQledsSDEETESFGKKLARLKREVEE-IKEISRAWAEKETT 151
                 67889999**9999999997666558888888888888888888887765.55666666666554 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.019
      APG6_N  32 lkklkkekkeeekqdeeleeleeeleklekeeeelleeLkelekeree..leaelaaleeelealeeeeerfwreyne 107
                 l+kl+k+ +         +++  +l+ +++e ++l +e ++le++r++  ++++  +  eel  + ee  + +++ n+
  KHJ32213.1 268 LEKLQKQVSVL------SNSTPSSLDGISREIRKLTQEAQKLESARKAanIAQKTMNKDEELTPKIEEDSELVMKLNA 339
                 44555552221......2344555777888888888888888877754115666667777777777777777777776 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.035
      APG6_N  55 eleklekeeeelleeLkelekereeleaelaaleeelealeeeeerf 101
                 +l+++++  ++  + L+++++e+ e+++++++ +e l+++e+   + 
  KHJ32213.1 363 SLRAIHASAATTKSALDKIDREQLEIADDIKKWQEGLSRMEKTMSEA 409
                 57777888888888899999999999999999998888888765444 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1      0.31   2.8e+02      39      98 ..     148     189 ..     101     197 .. 0.53
   2 ?    3.8   0.4     0.061        55      17      57 ..     263     303 ..     231     341 .. 0.63
   3 ?    4.3   0.1     0.043        39      23      84 ..     362     418 ..     355     434 .] 0.60

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.31
  Baculo_PEP_C  39 lldaietqLnalsedlksllaeldtrldtlltnLtdalnalqdtlrneLtnlnsiltnLl 98 
                     ++ +  + +l +d+++l+++ld+               +      ++t+ +s ++ L+
    KHJ32213.1 148 KETTNQDGIVDLGADVSALSKALDE---------------I---SCLQMTGRQSHISKLT 189
                   2223333333333333333333333...............2...2344555555555554 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.061
  Baculo_PEP_C  17 dLtnvLnairlqnvqilaqlatlldaietqLnalsedlksl 57 
                    + + L+ ++ q + +++   + ld i +++ +l+++ ++l
    KHJ32213.1 263 AVIPSLEKLQKQVSVLSNSTPSSLDGISREIRKLTQEAQKL 303
                   44455555555555555555555555555555555555554 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.043
  Baculo_PEP_C  23 nairlqnvqilaqlatlldaietqLnalsedlksllaeldtrldtlltnLtdalnalqdtlr 84 
                   +++r+  ++  a  +++ld+i+++  ++++d+k+     ++ l+ + +++++a ++++ ++r
    KHJ32213.1 362 HSLRAIHASA-ATTKSALDKIDREQLEIADDIKK----WQEGLSRMEKTMSEAEATMNSNIR 418
                   4555555555.66678888888888888888888....566677777777777777764443 PP

>> DUF3395  Domain of unknown function (DUF3395)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.4      0.17   1.5e+02       5      54 ..     107     157 ..     102     189 .. 0.86
   2 ?    9.1   1.3    0.0012       1.1      13      69 ..     294     365 ..     288     402 .. 0.69

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.17
     DUF3395   5 kkkrreleeqreelaeliaekrkeaeeaqellkeqaerkrekEerk.nGLv 54 
                 ++   +le   +e+ e   +k ++ + ++e++ke+++  +ekE+ + +G v
  KHJ32213.1 107 ESDTLQLEDSSDEETESFGKKLARLKREVEEIKEISRAWAEKETTNqDGIV 157
                 55555677778888899999999999**************99987657877 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0012
     DUF3395  13 eqreelaeliaekrkeaeeaqellkeqaerkrekEerknGLvIlkAlYGklpakk......k.........k 69 
                 ++  ++a++++ +rk+a+ aq+ ++++ e   + Ee+ +    l+AlYG lp  +      +         +
  KHJ32213.1 294 RKLTQEAQKLESARKAANIAQKTMNKDEELTPKIEEDSELVMKLNALYGALPVIEkmrpilPslldrlhslR 365
                 567889999***************************99955568******8877744333303333333330 PP

>> GvpK  Gas vesicle protein K
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.3   0.00084      0.75      39      68 ..     114     143 ..     100     173 .. 0.82
   2 ?   -2.0   0.1       4.1   3.7e+03      50      65 ..     290     305 ..     282     324 .. 0.51
   3 ?    0.5   0.2      0.69   6.1e+02      31      66 ..     376     412 ..     347     431 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00084
        GvpK  39 gdlsdeeierlgetLmkleeeleelkesfg 68 
                 +d sdee e  g++L +l++e+ee+ke  +
  KHJ32213.1 114 EDSSDEETESFGKKLARLKREVEEIKEISR 143
                 45689********************99765 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 4.1
        GvpK  50 getLmkleeeleelke 65 
                 +++++kl +e ++l++
  KHJ32213.1 290 SREIRKLTQEAQKLES 305
                 4555555554444432 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.69
        GvpK  31 qaiRRmeagdls.deeierlgetLmkleeeleelkes 66 
                  a+ ++++++l+ +++i +  e L ++e+ ++e ++ 
  KHJ32213.1 376 SALDKIDREQLEiADDIKKWQEGLSRMEKTMSEAEAT 412
                 5677788888864677888888888888888877665 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.9      0.37   3.4e+02      24      62 ..     105     144 ..      87     174 .. 0.78
   2 ?   -2.0   0.0       5.2   4.7e+03       9      24 ..     179     194 ..     172     206 .. 0.69
   3 ?   -1.7   0.0       4.3   3.9e+03      59      80 ..     256     276 ..     248     281 .. 0.52
   4 ?    9.8   0.1    0.0011      0.97       3      59 ..     284     340 ..     282     350 .. 0.87
   5 ?    2.8   0.2      0.17   1.5e+02      29      62 ..     375     408 ..     355     432 .. 0.60

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.37
  Syntaxin_2  24 tk.kdteelreklhelieeinelikktnellkklsqldns 62 
                 ++  dt +l ++ +e +e+  + + + ++ +++++++++ 
  KHJ32213.1 105 KReSDTLQLEDSSDEETESFGKKLARLKREVEEIKEISRA 144
                 4425888888888888888888888888888888887765 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 5.2
  Syntaxin_2   9 nsnvstleklvkqLgt 24 
                 ++  s + kl+k+Lg+
  KHJ32213.1 179 TGRQSHISKLTKDLGS 194
                 4555667777777776 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 4.3
  Syntaxin_2  59 ldnsssdsqqklqkekLkkdfk 80 
                 +dn s + + + + ekL+k+++
  KHJ32213.1 256 IDNGSRK-AVIPSLEKLQKQVS 276
                 4544432.33336666666654 PP

  == domain 4  score: 9.8 bits;  conditional E-value: 0.0011
  Syntaxin_2   3 snlqkinsnvstleklvkqLgtkkdteelreklhelieeinelikktnellkklsql 59 
                 s+l  i++ +++l +  ++L++++   ++ +k  +  ee++  i++ +el+ kl++l
  KHJ32213.1 284 SSLDGISREIRKLTQEAQKLESARKAANIAQKTMNKDEELTPKIEEDSELVMKLNAL 340
                 567889999999999999999999999999999999999999999999999999886 PP

  == domain 5  score: 2.8 bits;  conditional E-value: 0.17
  Syntaxin_2  29 eelreklhelieeinelikktnellkklsqldns 62 
                 +   +k++  + ei + ikk +e l+++++    
  KHJ32213.1 375 KSALDKIDREQLEIADDIKKWQEGLSRMEKTMSE 408
                 4444666666666666666666666666654433 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.73   6.5e+02      62      83 ..     123     144 ..      89     174 .. 0.68
   2 ?    6.2   0.4     0.014        12      24      59 ..     268     303 ..     263     339 .. 0.49
   3 ?    1.2   0.1       0.5   4.5e+02      22      48 ..     400     426 ..     396     433 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.73
      DUF948  62 dvneklekvdplteavadlges 83 
                    +kl+++++ +e++++++++
  KHJ32213.1 123 SFGKKLARLKREVEEIKEISRA 144
                 4445666666666666666544 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.014
      DUF948  24 lkktldeaaatieelekqvdpilkevedllakvnel 59 
                 l+k+ ++++   +++ + +d+i++e+++l++++++l
  KHJ32213.1 268 LEKLQKQVSVLSNSTPSSLDGISREIRKLTQEAQKL 303
                 444444444455555566666666666666666662 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.5
      DUF948  22 lklkktldeaaatieelekqvdpilke 48 
                  +++kt++ea+at+++  + +++ +k+
  KHJ32213.1 400 SRMEKTMSEAEATMNSNIRFMNEWMKK 426
                 577899999999888755555555555 PP

>> DUF4337  Domain of unknown function (DUF4337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   3.0     0.016        14      51     109 ..      94     151 ..      89     157 .. 0.75
   2 ?    4.5   0.2     0.038        34      70     116 ..     270     316 ..     251     323 .. 0.78
   3 ?    2.4   0.2      0.17   1.5e+02      77     111 ..     369     403 ..     357     424 .. 0.51

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.016
     DUF4337  51 hlaeleleqlelllkakaeelaaavdkkiakykkkiarykkekkeikkkAkeleaerde 109
                 + ++ ++++l+   ++++ +l++  d++ +++ kk ar k+e +eik+  +++ ++ ++
  KHJ32213.1  94 KSYKASSRNLRKR-ESDTLQLEDSSDEETESFGKKLARLKREVEEIKEISRAWAEKETT 151
                 4455544444433.333788999999**********************99999877655 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.038
     DUF4337  70 elaaavdkkiakykkkiarykkekkeikkkAkeleaerdeaneasdk 116
                 +l+++v+   +++    +  ++e  ++ ++A++le++r++an a+++
  KHJ32213.1 270 KLQKQVSVLSNSTPSSLDGISREIRKLTQEAQKLESARKAANIAQKT 316
                 55666666666777777777888899999999999999999988775 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.17
     DUF4337  77 kkiakykkkiarykkekkeikkkAkeleaerdean 111
                 + +a++k   ++ ++e+ ei+++ k++++   + +
  KHJ32213.1 369 ASAATTKSALDKIDREQLEIADDIKKWQEGLSRME 403
                 33444444444444444444444444443333222 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   1.8    0.0089         8     112     176 ..      97     172 ..      82     201 .. 0.66
   2 ?    2.6   0.9      0.12     1e+02     129     159 ..     283     322 ..     238     340 .. 0.54
   3 ?    7.6   1.5    0.0033         3      90     146 ..     357     413 ..     353     433 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0089
      DUF724 112 kklekkieeeesekrkleeeid....elekkilelerqlallk.......ekkeaadkeiarlkseaekleeeled 176
                 k+  +++++ es+  +le++ d     + kk ++l+r+ + +k       ek+ +++  i++l +++++l+++l++
  KHJ32213.1  97 KASSRNLRKRESDTLQLEDSSDeeteSFGKKLARLKREVEEIKeisrawaEKETTNQDGIVDLGADVSALSKALDE 172
                 33333333333333333322221111455555555555555555555555999999999***99999999998876 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.12
      DUF724 129 eeeidelekkilelerqlallk.........ekkeaadke 159
                  +++d ++++i++l ++++ l          +k +++d+e
  KHJ32213.1 283 PSSLDGISREIRKLTQEAQKLEsarkaaniaQKTMNKDEE 322
                 3445555555555555554444111111133333333333 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.0033
      DUF724  90 lqsrlnkLlslkdeqtklleerkklekkieeeesekrkleeeidelekkilelerql 146
                 l++rl+ L +++ + + +++++ k++++  e +++ +k +e ++ +ek+++e e   
  KHJ32213.1 357 LLDRLHSLRAIHASAATTKSALDKIDREQLEIADDIKKWQEGLSRMEKTMSEAEATM 413
                 778999999999999999999999999999999999999999999999999988654 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   1.6     0.027        24      15      68 ..      90     156 ..      80     192 .. 0.53
   2 ?    4.7   0.4     0.017        15      15      79 ..     269     331 ..     259     346 .. 0.50
   3 ?    5.5   1.1    0.0095       8.5      10      75 ..     363     431 ..     358     434 .] 0.77

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.027
       TMPIT  15 eetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvk.............eeeeeev 68 
                  ++ k+yk+++++l k +s++ + +++  ++ +++ ++l +lk++v+             + +++ +
  KHJ32213.1  90 TAKRKSYKASSRNLRKRESDTLQLEDSSDEETESFGKKLARLKREVEeikeisrawaekeTTNQDGI 156
                 4455555555555555555555555555555555555555555554311111112222223344444 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.017
       TMPIT  15 eetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvkeeeeeeveelkeelkerk 79 
                 e+ +k++   ++++ ++ + +s+ei+k ++++++l+s+ k  + +  +++ ++ eel+ +++e +
  KHJ32213.1 269 EKLQKQVSVLSNSTPSSLDGISREIRKLTQEAQKLESARKAANIA--QKTMNKDEELTPKIEEDS 331
                 444444444444455555555555555555555555554444433..333333444444444433 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.0095
       TMPIT  10 efkeleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvk...eeeeeeveelkeel 75 
                 ++++++++a + k+ l+++ + q +++ +ikk ++ l+++++++++ +++++   +  +e +++l+e++
  KHJ32213.1 363 SLRAIHASAATTKSALDKIDREQLEIADDIKKWQEGLSRMEKTMSEAEATMNsniRFMNEWMKKLEENM 431
                 567888899999999999999999999999999999999999999999987533333444555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1478  (0.0824363); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.41
# Mc/sec: 3209.32
//
Query:       KHJ32214.1  [L=83]
Description: hypothetical protein EV44_g1292 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.013   15.7   2.3       0.02   15.1   2.3    1.3  1  GCN5L1     GCN5-like protein 1 (GCN5L1)
      0.029   14.5   5.9      0.034   14.2   5.9    1.2  1  ADIP       Afadin- and alpha -actinin-Binding
      0.041   14.2   1.8      0.055   13.8   1.7    1.4  1  E2F_CC-MB  E2F transcription factor CC-MB domain
      0.049   14.0   1.7      0.049   14.0   1.7    1.6  1  CLZ        C-terminal leucine zipper domain of cyclic nucleot
      0.065   13.6   1.4       0.55   10.6   0.2    2.0  2  DUF2383    Domain of unknown function (DUF2383)
      0.089   12.8   0.5      0.099   12.6   0.5    1.1  1  ApoO       Apolipoprotein O
       0.13   12.4   7.7        8.9    6.5   7.7    2.1  1  BRE1       BRE1 E3 ubiquitin ligase
       0.15   10.9   4.9       0.18   10.7   4.9    1.1  1  Spc7       Spc7 kinetochore protein
       0.24   10.6   2.6       0.28   10.4   2.6    1.0  1  TMPIT      TMPIT-like protein
       0.25   12.0   2.7       0.51   11.0   2.2    1.8  2  SlyX       SlyX
        0.3   11.4   3.2       0.64   10.3   3.2    1.6  1  DUF948     Bacterial protein of unknown function (DUF948)
          3    8.1   6.9         17    5.7   6.9    1.9  1  Spc24      Spc24 subunit of Ndc80


Domain annotation for each model (and alignments):
>> GCN5L1  GCN5-like protein 1 (GCN5L1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   2.3   1.3e-05      0.02      14      66 ..      29      81 ..      13      82 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.3e-05
      GCN5L1 14 eeqekakkeaiesaaaltealvdklnsgvaeayanqkklekeakalqanvakf 66
                 + e++ +++++s+++ t al+d+ln+ v++a + +k+ ++ +k+l+++ +++
  KHJ32214.1 29 TSLETKLDNILASCQQQTSALTDELNNTVQQAGRVEKEKNSGLKDLKEKNKRY 81
                35678889999*********************************999988776 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   5.9   2.3e-05     0.034      64     124 ..       9      69 ..       4      81 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.3e-05
        ADIP  64 kleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlkna 124
                 k  ae+e+ +++ + l+ +l++le++l+   a ++q++ +l+++ + + +++  +++ kn 
  KHJ32214.1   9 KVLAELEHGEKTAQMLESKLTSLETKLDNILASCQQQTSALTDELNNTVQQAGRVEKEKNS 69 
                 56799****************************************************9874 PP

>> E2F_CC-MB  E2F transcription factor CC-MB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   1.7   3.7e-05     0.055       7      36 ..      27      56 ..      20      81 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 3.7e-05
   E2F_CC-MB  7 sleeeeqkLDelieklteqlknltedeknq 36
                +l++ e kLD++++++++q   lt++ +n+
  KHJ32214.1 27 KLTSLETKLDNILASCQQQTSALTDELNNT 56
                78999******************9988874 PP

>> CLZ  C-terminal leucine zipper domain of cyclic nucleotide-gated channels
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   1.7   3.3e-05     0.049      24      63 ..      12      51 ..       3      59 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.3e-05
         CLZ 24 aeqkeleekverLessLeaLqtrlarLlaeyessqrkLkq 63
                ae +  e+ ++ Les+L +L+t+l  +la  ++  + L+ 
  KHJ32214.1 12 AELEHGEKTAQMLESKLTSLETKLDNILASCQQQTSALTD 51
                5667789999*******************99999888875 PP

>> DUF2383  Domain of unknown function (DUF2383)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1      0.12   1.8e+02      90     101 ..      10      21 ..       3      29 .. 0.83
   2 ?   10.6   0.2   0.00037      0.55      30      67 ..      33      70 ..      26      77 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.12
                 HHHHHHHHHHHH CS
     DUF2383  90 ileeleegEdka 101
                 +l+ele+gE++a
  KHJ32214.1  10 VLAELEHGEKTA 21 
                 89*******986 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00037
                HHHHHHHHHHHHHHHHHHHHHHHHHHHCT--------- CS
     DUF2383 30 pqlktlleriaeereeaaeeLqseiralggepedggsl 67
                ++l ++l +++++ ++  +eL++ +++ g+  ++++s 
  KHJ32214.1 33 TKLDNILASCQQQTSALTDELNNTVQQAGRVEKEKNSG 70
                57889999999999***************988888775 PP

>> ApoO  Apolipoprotein O
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.5   6.7e-05     0.099      10      61 ..      25      76 ..       5      81 .. 0.61

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 6.7e-05
        ApoO 10 eeptdrLeegvrslRkslepytsavqdelnkvkskvetaeqsvtdtiasLke 61
                e++ ++Le++  ++  s++++tsa++deln++ +++   e+  ++ ++ Lke
  KHJ32214.1 25 ESKLTSLETKLDNILASCQQQTSALTDELNNTVQQAGRVEKEKNSGLKDLKE 76
                4455566666666666666666666666666666666666666666666666 PP

>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   7.7     0.006       8.9       3      44 ..       5      46 ..       4      81 .. 0.64

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.006
        BRE1  3 kELvklekafeelseqlskkvkeltileekklrleaekakad 44
                +E+vk+ ++ e  +++++++ ++lt+le k+  + a  +++ 
  KHJ32214.1  5 SEIVKVLAELEHGEKTAQMLESKLTSLETKLDNILASCQQQT 46
                577777777777777777777777777777766666555544 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   4.9   0.00012      0.18     154     207 ..      24      77 ..       5      81 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00012
        Spc7 154 dkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelree 207
                  +++L++ e +ld++l + +++ ++l++el++  ++a  +e+ ++  L+ l+e+
  KHJ32214.1  24 LESKLTSLETKLDNILASCQQQTSALTDELNNTVQQAGRVEKEKNSGLKDLKEK 77 
                 467899999999999999999999999999999999999999999999999986 PP

>> TMPIT  TMPIT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.6   0.00018      0.28       7      75 ..       7      78 ..       2      82 .. 0.59

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00018
       TMPIT  7 lekefkeleetakeykqkleelsklqskcskeikkqkkrlkelksslkklkksvk...eeeeeeveelkeel 75
                + k + ele+ +k+ +    +l++l++k+ + +++++++ ++l+++l+++ ++++   +e+++ +++lke+ 
  KHJ32214.1  7 IVKVLAELEHGEKTAQMLESKLTSLETKLDNILASCQQQTSALTDELNNTVQQAGrveKEKNSGLKDLKEKN 78
                445555666666666666666667777777777777777777777777766664422255555666666654 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1     0.075   1.1e+02       1      12 [.      24      35 ..       5      37 .. 0.62
   2 ?   11.0   2.2   0.00034      0.51       7      57 ..      23      70 ..      17      79 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.075
                HHHHHHHHHHHH CS
        SlyX  1 leerleeLEikl 12
                le++l+ LE+kl
  KHJ32214.1 24 LESKLTSLETKL 35
                344555555544 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00034
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXXXX CS
        SlyX  7 eLEiklafqedtieeLndvvaeqqqqidrlqrqlrllaerlkeleessgas 57
                 LE+kl+ +e    +L++++a  qqq ++l+ +l+  +++   +e++++++
  KHJ32214.1 23 MLESKLTSLET---KLDNILASCQQQTSALTDELNNTVQQAGRVEKEKNSG 70
                57888887775...78899*********************98888887654 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.2   0.00043      0.64      23      66 ..      34      77 ..       6      81 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00043
      DUF948 23 klkktldeaaatieelekqvdpilkevedllakvnelledvnek 66
                kl ++l + +++   l+++++++++++ ++ ++ n  l+d++ek
  KHJ32214.1 34 KLDNILASCQQQTSALTDELNNTVQQAGRVEKEKNSGLKDLKEK 77
                45555566666666666666666666666666666666666555 PP

>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   6.9     0.011        17       8      49 ..       9      51 ..       4      81 .. 0.61

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.011
       Spc24  8 riakelsdleselesleselaelkeeleeleeeseekeser.v 49
                ++  el++ e++++ les+l++l+++l+++  + ++++s++  
  KHJ32214.1  9 KVLAELEHGEKTAQMLESKLTSLETKLDNILASCQQQTSALtD 51
                5556666667777777777777777777766666663333321 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1693  (0.094428); expected 358.6 (0.02)
Passed bias filter:                      740  (0.0412739); expected 358.6 (0.02)
Passed Vit filter:                       114  (0.00635841); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 636.98
//
Query:       KHJ32215.1  [L=589]
Description: hypothetical protein EV44_g5115 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-33  113.6   0.0    1.3e-32  112.5   0.0    1.5  1  RTC4      RTC4-like domain
  ------ inclusion threshold ------
      0.048   14.0   0.1       0.39   11.1   0.0    2.3  2  NusA_N    NusA N-terminal domain


Domain annotation for each model (and alignments):
>> RTC4  RTC4-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.5   0.0   1.4e-36   1.3e-32       4     121 .]     458     569 ..     456     569 .. 0.97

  Alignments for each domain:
  == domain 1  score: 112.5 bits;  conditional E-value: 1.4e-36
        RTC4   4 keSvyrdeakeavkksgkrklskeekrkldlekftpGYYGlkgqriiseeilkkfkkelrkravkdklvsargvsdFvqaVLvPEvavrLimeDmkvse 102
                 keS+yr+ +++++++ + r+l+++       +++ pGYYG++g riise++++kf+  l+kr v+d+l++arg++ +vq+VLvPEva++Li+eDm+++ 
  KHJ32215.1 458 KESYYRSLLQDKIDRGKDRNLRTA------TTNLIPGYYGPRGLRIISENLFRKFTPLLKKRIVQDRLIAARGYTPYVQSVLVPEVATLLIQEDMHITL 550
                 78*************777999999......899****************************************************************** PP

        RTC4 103 eeAreileesaeyGelvne 121
                 +eArei+ es+ +Gel++e
  KHJ32215.1 551 SEAREIMAESVVVGELLHE 569
                 ****************996 PP

>> NusA_N  NusA N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.19   1.7e+03      26      53 ..     261     293 ..     255     312 .. 0.72
   2 ?   11.1   0.0   4.4e-05      0.39      66      99 ..     542     575 ..     504     583 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.19
                 HHHHHHHHC....CT-SS.S-EEEEE-TTT--E CS
      NusA_N  26 eaLakaykk....nyged.enveveidretgei 53 
                 ++L+ka+kk    n ++  +  +++i+  t++i
  KHJ32215.1 261 KSLTKAIKKpaykNCDSSpDSKRIKINSPTNTI 293
                 567777776322245455355888888777665 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 4.4e-05
                 S-TTTEEEHHHHHCC.STT--TTBEEEEE----SS CS
      NusA_N  66 edpekeIsleeakki.dpkikvGdtveeevtpkdf 99 
                  +++ +I+l+ea++i  +++ vG+ + eev ++df
  KHJ32215.1 542 IQEDMHITLSEAREImAESVVVGELLHEEV-REDF 575
                 377899********636779**********.5888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (589 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       776  (0.0432818); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 4258.58
//
Query:       KHJ32216.1  [L=394]
Description: hypothetical protein EV44_g3760 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      8e-05   23.0   3.1    0.00015   22.1   3.1    1.5  1  eIF3g      Eukaryotic translation initiation factor 3 subunit
    0.00012   22.0   2.8    0.00012   22.0   2.8    2.6  3  zf-CCHC    Zinc knuckle
  ------ inclusion threshold ------
       0.24   11.4   4.2      0.085   12.8   1.3    1.7  2  zf-CCHC_3  Zinc knuckle


Domain annotation for each model (and alignments):
>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   3.1   2.6e-08   0.00015      40     123 ..     192     290 ..     164     292 .. 0.68

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 2.6e-08
       eIF3g  40 kvskavaeRkkwaKfGdekgdkpgpnsatttvgeevelkl.............eeekee......ekeeeekekaklkkkekklvkCriCk.gdHfTsk 118
                 ++ k+ ++ k ++ +G + + +++++ +  ++ ++ + +l             +           +++++++  +k+k  ++k v+C  Ck + H++ k
  KHJ32216.1 192 TIFKTSVKDKASSLYGMASNIPQSQDWTAEQLYQNFISQLyqrvdkepkaddkQ----VtpkslhNTQSRDHRGKKAK-DSRKSVRCWKCKeEGHYSNK 285
                 444555566778888888888888888888888777777788888887665541....13334533333444444444.44566******8799***** PP

       eIF3g 119 CPykd 123
                 CP k+
  KHJ32216.1 286 CPKKK 290
                 **997 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.55   3.3e+03       7      13 ..     140     146 ..     140     148 .. 0.77
   2 !   22.0   2.8     2e-08   0.00012       2      18 .]     272     288 ..     271     288 .. 0.94
   3 ?   -2.3   1.2      0.96   5.7e+03       4       8 ..     373     377 ..     373     378 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.55
                 SSSSSTT CS
     zf-CCHC   7 GepGHia 13 
                 +++GH+ 
  KHJ32216.1 140 QQVGHVQ 146
                 589**86 PP

  == domain 2  score: 22.0 bits;  conditional E-value: 2e-08
                 CTSSSSSSSSTTTTSTS CS
     zf-CCHC   2 kCynCGepGHiardCpk 18 
                  C++C e+GH+++ Cpk
  KHJ32216.1 272 RCWKCKEEGHYSNKCPK 288
                 7***************7 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.96
                 SSSSS CS
     zf-CCHC   4 ynCGe 8  
                 y+CG+
  KHJ32216.1 373 YRCGG 377
                 9***6 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1       1.6   9.8e+03       3       9 ..       3       9 ..       2      11 .. 0.74
   2 ?   12.8   1.3   1.4e-05     0.085       3      26 ..     269     290 ..     267     304 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.6
   zf-CCHC_3 3 asaaCQk 9
               ++  CQk
  KHJ32216.1 3 VKSHCQK 9
               5667998 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 1.4e-05
   zf-CCHC_3   3 asaaCQkClkkGHwtYECknager 26 
                 +s++C kC ++GH++  C++  ++
  KHJ32216.1 269 KSVRCWKCKEEGHYSNKCPK--KK 290
                 689****************5..22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       979  (0.0546043); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.20s 00:00:00.70 Elapsed: 00:00:00.37
# Mc/sec: 3164.65
//
Query:       KHJ32217.1  [L=116]
Description: hypothetical protein EV44_g0575 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       201  (0.0112109); expected 358.6 (0.02)
Passed bias filter:                      157  (0.00875676); expected 358.6 (0.02)
Passed Vit filter:                         5  (0.000278878); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.28s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 824.22
//
Query:       KHJ32218.1  [L=520]
Description: putative aminotransferase class i and ii [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.9e-34  117.1   0.0    1.3e-33  116.7   0.0    1.1  1  Aminotran_1_2    Aminotransferase class I and II
    0.00071   18.2   0.0     0.0012   17.5   0.0    1.2  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
  ------ inclusion threshold ------
       0.13   11.9   0.1       0.26   11.0   0.1    1.4  1  DUF3755          Protein of unknown function (DUF3755)


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.7   0.0   2.1e-37   1.3e-33       2     357 ..     124     492 ..     123     494 .. 0.83

  Alignments for each domain:
  == domain 1  score: 116.7 bits;  conditional E-value: 2.1e-37
                    EEEESSSSSTTSTTSSHHHHHHHHHHHH..HHHHHTSTTST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-E CS
  Aminotran_1_2   2 dvinLgsneylgdsgkptlpevakaeke..galaggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgde 95 
                     v+nL+s ++   ++++ ++e a ++ +  g++ +g+  +yg++d++ ++e ++a+ lg        +ea +v+ + ++ + +++++++k  +gd 
     KHJ32218.1 124 TVTNLASYNFYNFTSNENIKEKAIQTLRtyGVGPCGPPQFYGTQDVHMKVEAEIASRLG--------TEACIVYAQAFSTISSVIPAFCK--RGDI 209
                    689****9999997885554433333346******************************........9999******************9..**** PP

                    EEEEESS-THHHHHHHHTTSEEEEEEBEETTTTEE-HHHHHHHHTTHHCTTE....TEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEE CS
  Aminotran_1_2  96 ilvpdptyasyknilrlsggevvryplyseedfhldlealeealkeapegnk....ktkvilvesphNPtGtvatleeleklldlakkynlllfvD 187
                    i++++ +   + ++l++s++++++y+       h+++e+le+ l++  ++++     +++i+ e+ +   G+  +l++l +l   + +y+++l++D
     KHJ32218.1 210 IVADRAVNYAIRKGLQISRSTIRYYE-------HNNMEDLERVLQKVVKEQAkkplTRRFIVAEGFSETIGDCVDLPKLIEL---KLRYKFRLMLD 295
                    **************************.......*************87777789999*************************...*********** PP

                    ETTTTCBSSSS..HTHHH.HGGSTTSTTEEEEEESSSTTSSGGG-EEEEEEEHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Aminotran_1_2 188 eaYagfvfgsl..davat.ranveeepnllivgslsKafGlaGeRvGyilgnaavvsqlrklsrpflsssllqaavaaalsdallkqseleemrqr 280
                    e+ + +v g++  +   t   nv+    +++vgsl+  +++ G   G+++g+++vv+++r+ ++++++s++l+a++a+ +  +l +   +++   +
     KHJ32218.1 296 ETWSFGVAGKTgrG--VTeAQNVDISQVDMLVGSLAGPLSAGG---GFCAGSSDVVEHQRISAASYTFSAALPALLATTACETLNMLHTNTDLFTQ 386
                    *********77432..334888888888***************...***************************************99988888888 PP

                    HHHHHHHHHHHHHHS..TEEEECCSCSSEEEEEETHH..........CHHHHHHH..........HHHTCTEEEEEGGGGTS.............T CS
  Aminotran_1_2 281 lqkrrkelrdeLael..glkvlasqsgmflltdlsae..........takelskk..........Lleevgvyvtpgtsftv.............p 341
                      ++ k +r++L+     +k+++   + +++ +l+ e          +      +           l + gv++t+++s                +
     KHJ32218.1 387 CRENIKAMRAQLDPRsdWVKCTSMTENPVMIFVLKSEviksraltyaD------QdrilqecvdeALAN-GVLITRIKSISNltpssnkdddwkvQ 475
                    888888899888666855677777766666666666668554444442......145444455554444.78888887776666666777777775 PP

                    TEEEEEC.TTS-HHHHH CS
  Aminotran_1_2 342 grlRitv.Aglteeele 357
                      l++++  gl+++e e
     KHJ32218.1 476 PALKVCItTGLSKKETE 492
                    55777776666666665 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   1.9e-07    0.0012      55     180 ..     171     302 ..     165     306 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.9e-07
                      HHHHHHHHHHHT-SEEEEESSHHHHHHHHHHTTS-TTEEEEEESTSSHHHHHHHHHTHHHTTCEEEEESTTSHHH.HHHHCCT......TEEEE CS
  Cys_Met_Meta_PP  55 svleeriaaLeggeaalavssGmaAiaaailallkaGdeivvsddlYggtqrllkkvlkklgievkfvdtsdlee.lekaike......ntklv 141
                        +e++ia   g+ea+++++   ++i+++i a++k Gd iv+++ +    ++ l+   + +   +++ +++dle+ l+k++ke        + +
       KHJ32218.1 171 MKVEAEIASRLGTEACIVYAQAFSTISSVIPAFCKRGDIIVADRAVNYAIRKGLQISRSTIRY-YEHNNMEDLERvLQKVVKEqakkplTRRFI 263
                      5689999*999********************************99966666655544443332.333444444331344444422222223578 PP

                      EEESS-TTTT----HHHHHHHHHHTT-EEEEEGTTTHTT CS
  Cys_Met_Meta_PP 142 ylEtptnpllkvvDiekiaklakkagvlvvvDntfaspl 180
                        E  +    ++vD++k+++l    +  +++D t++ ++
       KHJ32218.1 264 VAEGFSETIGDCVDLPKLIELKLRYKFRLMLDETWSFGV 302
                      99*********************************8776 PP

>> DUF3755  Protein of unknown function (DUF3755)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   4.4e-05      0.26       6      20 ..     379     393 ..     377     400 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.4e-05
     DUF3755   6 eNidLFcqtRdNIma 20 
                  N+dLF q R NI+a
  KHJ32218.1 379 TNTDLFTQCRENIKA 393
                 5************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       713  (0.039768); expected 358.6 (0.02)
Passed bias filter:                      612  (0.0341346); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 3525.05
//
Query:       KHJ32219.1  [L=259]
Description: putative nicotinamide riboside kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00025   20.8   0.4     0.0097   15.7   0.4    2.8  1  PRK       Phosphoribulokinase / Uridine kinase family
  ------ inclusion threshold ------
      0.054   14.0   0.3       0.21   12.2   0.3    2.0  1  AAA_18    AAA domain
      0.072   13.5   0.0      0.088   13.2   0.0    1.3  1  AAA_16    AAA ATPase domain
       0.11   12.8   0.0       0.17   12.1   0.0    1.3  1  AAA_28    AAA domain
       0.14   11.9   0.0       0.21   11.4   0.0    1.3  1  CPT       Chloramphenicol phosphotransferase-like protein


Domain annotation for each model (and alignments):
>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.4   2.7e-06    0.0097       1     142 [.      10     170 ..      10     199 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 2.7e-06
         PRK   1 vIgvagsSGaGkttvarklekifgrekvkaaei.................egdsflrldraekdleleerkrakekevsflspeandfdllyevlkelk 82 
                 v+g++g+S +Gktt++r l  if +  v                      + ++ l+++++ k+l+  +++++ + e +  +    +f + ++   +l 
  KHJ32219.1  10 VVGISGASSSGKTTLSRLLMIIFPNLLVLHEDDffkpeneipykggfqnwDCVQALSIENIIKSLKNVRQNGTIH-ENKEIKKSSLQFTEDEKNNSKLL 107
                 79*********************9766653333677777788888888776677777777778877777777774.44555667778888888888888 PP

         PRK  83 egkkvdkpiYsheteeaapdkeel.iegadvlviEG..lhalydervaelldlkiyvdisidl 142
                   k v  +i +  +  +ap ++      + + ++EG  l++    ++  +ldlki++ +s+  
  KHJ32219.1 108 VCKDVIMRIKDKIESWSAPGQPGYsFRYKRICLFEGflLYSRSTSEIWPYLDLKIFLQTSESF 170
                 888888888888888888855544144577999999444555555699999999999998764 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.3   5.8e-05      0.21       1      42 [.      11      53 ..      11     185 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.8e-05
      AAA_18  1 IlltGtpGvGKttlakeLskrl.gfgvnlrdvakenglllevd 42
                ++++G++ +GKttl++ L     ++ v + d +++ + ++++ 
  KHJ32219.1 11 VGISGASSSGKTTLSRLLMIIFpNLLVLHEDDFFKPENEIPYK 53
                689***************6555444333333333333333333 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.5e-05     0.088      27     102 ..      11      91 ..       3     183 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.5e-05
      AAA_16  27 vllsGesGvGKsslvrellralekdggiflrgkcdqlesaipy......salaqalareellrqlldeaesaeleawrekle 102
                 v +sG+s +GK++l r l+  +  +  ++ + ++ + e +ipy         +qal+ e +++ l++  ++    + +e  +
  KHJ32219.1  11 VGISGASSSGKTTLSRLLM-IIFPNLLVLHEDDFFKPENEIPYkggfqnWDCVQALSIENIIKSLKNVRQNGTIHENKEIKK 91 
                 5699***************.88888333366666666999***999987778888888899999988866555555554444 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.8e-05      0.17       3      19 ..      12      28 ..      10      40 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4.8e-05
      AAA_28  3 vitGgestGKTtlleaL 19
                 i+G++s+GKTtl++ L
  KHJ32219.1 12 GISGASSSGKTTLSRLL 28
                59***********9987 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   5.8e-05      0.21       4      38 ..      11      44 ..       8      83 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.8e-05
                EEEEE-TTSSHHHHHHHHHHHSSS-EEEEEHHHHH CS
         CPT  4 ilLnGgsssGKsslaralqevldepwlhlgvDafv 38
                + + G+sssGK++l+r l  ++++  l l  D f+
  KHJ32219.1 11 VGISGASSSGKTTLSRLLMIIFPNL-LVLHEDDFF 44
                5578*************99998864.455556655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      629  (0.0350828); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 1883.41
//
Query:       KHJ32220.1  [L=847]
Description: putative plasma membrane phosphate transporter pho87 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-35  123.5   4.7    1.1e-27   98.0   1.7    2.1  2  SPX            SPX domain
    2.5e-30  106.0  37.6    3.5e-30  105.5  37.6    1.2  1  Na_sulph_symp  Sodium:sulfate symporter transmembrane region
    1.2e-27   96.9  34.8    1.2e-27   96.9  34.8    1.5  1  CitMHS         Citrate transporter
  ------ inclusion threshold ------
       0.14   12.2   0.7       0.29   11.2   0.1    1.9  2  TFIIA_gamma_N  Transcription initiation factor IIA, gamma sub
        1.2    8.2   3.8       0.24   10.5   0.2    1.6  2  TipE           Na+ channel auxiliary subunit TipE


Domain annotation for each model (and alignments):
>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.1   1.3e-09   4.6e-06       1      34 [.       1      34 [.       1      42 [. 0.93
   2 !   98.0   1.7     3e-31   1.1e-27     170     381 ..      40     270 ..      34     273 .. 0.66

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 1.3e-09
         SPX  1 MKFakeLeenlvpEWrdaYldYkqLKKlIkkvqr 34
                MKF+++ ++n++p W   Yl Y+ LKKl +++++
  KHJ32220.1  1 MKFSRSIKFNAIPDWGPYYLAYSNLKKLTYRLEK 34
                ******************************9988 PP

  == domain 2  score: 98.0 bits;  conditional E-value: 3e-31
         SPX 170 ksersyetrplr....aekeFferLdseLnkvetFykakeeefterlesLrkqleal.rprrikeaeer..ksdlyrwre...............ifgl 246
                 ++ +++e++pl     ++ +F + Ld+eL+k+  Fyk+ e e + ++e+L k++e+  +++ ++  +++  ++++                    +++ 
  KHJ32220.1  40 SGPDDPESSPLIpneePDVVFRRALDKELDKICLFYKSIESEIFGEYEILVKDIERSeSNSEQASGHDEftSNHR----RkprtksvasvhlwgpKSRR 134
                 5566677766667777****************************************9777555533333221111....13345777744444432222 PP

         SPX 247 ksveaqvfessreldrgelseeardkevseelekngwikptksklekkr..neralekvkpektlkafldsvrrdylrk..enrvklkkakkklkkafv 341
                 +s+ +++ +  +e d  +++  a +k+++e ++ ++ ++   ++++k+r   +++l+    ++ +  +  +  +d++++  + + ++++ +  lk++++
  KHJ32220.1 135 ESTLSRSTDDASEDDDVDEN-TALQKSHHEPENVESTSNVSVNRRRKHRtgMKESLDLD--SQSIGIICPTDDNDEIKQnkIINPQYHTNRISLKDRVI 230
                 23333333333333333322.22222222222222222222222222224344445554..777777777888888888777889************** PP

         SPX 342 elYrgLelLKsYqeLNrtAFrKIlKKfDKvtaltaskrym 381
                   Y++L +L s++ LNr++F K+lKKfDK+ +  +++ ym
  KHJ32220.1 231 SNYVQLYELMSFIQLNRIGFMKVLKKFDKIIGKSLKSLYM 270
                 ***************************************9 PP

>> Na_sulph_symp  Sodium:sulfate symporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.5  37.6   9.7e-34   3.5e-30       5     468 ..     385     844 ..     381     847 .] 0.85

  Alignments for each domain:
  == domain 1  score: 105.5 bits;  conditional E-value: 9.7e-34
  Na_sulph_symp   5 aklllllvvlliilllPapdgleskawrllaifiaaivglileplplavialialsllavligvla..........akalsevlsgfssdttlLvf 90 
                     +ll +  v+lii+l   p+ le+++  +la+++++ + + +e +pl ++al++  l++vl +v +          ++a + + +     ++lL++
     KHJ32220.1 385 YYLLGIFSVFLIIFLA--PINLEPEQHNCLAMLVTVSLLWATEVIPLFATALMIPFLCVVLRIVRSddiphnrlepNEAAKYIFAAMWTPVILLML 478
                    5566667788888885..678*******************************************99*******999999999999999******** PP

  Na_sulph_symp  91 aalliaaavektgLgkRiAlvlvkivGkrt..liLgyalvladlllapatpsntAraggivfpvikslssafgsepekqserkigaylmltvvqsa 184
                    ++l+iaaa+ k  + +RiA  ++++ G ++    L  + v+a+ ++++++ +++    +++ p +++l+s       +     +++ ++l ++ ++
     KHJ32220.1 479 GGLTIAAALSKYDIARRIATAMLSKAGDKPktVLLTTMFVAAFASMWVSNIAASVLCFSVIQPLLRNLPSD------S----PVSKGMVLGIALAS 564
                    ****************************9965677788888999***********9999999999999862......2....256789******** PP

  Na_sulph_symp 185 sitsiaflTamApNllllglinsilgveitwasWflaaiptgvillllvplllyvlyppeikkkeeakavaktelkelGpltarekallilfvlll 280
                     ++++    +  +Nl+++++++       +w+ Wf + ip+g+i++ll++++l   + p    k             +  lt  +  ++i+ ++ +
     KHJ32220.1 565 NVGGMLSPISSPQNLIAIQFMQ----PPPSWLVWFFITIPVGLISILLIWMVLILTFRPAKGTKIVPL------RPVVEKLTGVQLFVSIVTIVTI 650
                    **********************....5679***********************999988766552222......23444578899*********** PP

  Na_sulph_symp 281 llWifgesln...idattvaivvlvillllrvldWkDivkqktaWntllllgglialakllersgliewlgnklttslsglspavaiiiilslfvl 373
                    +lW fg++l+    d ++vai+   i + + vl+ +D   ++  W  ++l +g+++l k  + sgl++ ++  ++   ++l+  ++ + i+s++++
     KHJ32220.1 651 ILWCFGHQLEwllGDMGVVAIIPAFIFFGSGVLTKEDF--NNLLWTLIILAAGGLSLGKAVDSSGLLHTIAREISARIENLHIYIV-LCIFSILIM 743
                    *********9987899********************76..7789***********************************8887665.567888888 PP

  Na_sulph_symp 374 vhylfaSatAttaallpillavaqaipg.appllvalllalatslagfllpyatgpnp..ivf.....gagylkvkdywrlGfilsiigllillll 461
                    +   f S +    ++lp+l  v+      +p llv +  +l+   a + lp ++ pn+  i++     g  ylk k++   G++ s+i+l+ +l++
     KHJ32220.1 744 LISTFVSHAIAALIILPLLYKVGSNFDDpHPNLLV-MGGTLICTAA-MGLPTSSFPNMtaIMLenpetGHRYLKAKHFITRGLPSSLISLVTILTV 837
                    88899999999999***********9775554444.4444444443.455666666551143344444899************************* PP

  Na_sulph_symp 462 galwwkl 468
                    g +  k+
     KHJ32220.1 838 GYVLMKI 844
                    9776665 PP

>> CitMHS  Citrate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.9  34.8   3.4e-31   1.2e-27       2     297 ..     420     779 ..     419     790 .. 0.79

  Alignments for each domain:
  == domain 1  score: 96.9 bits;  conditional E-value: 3.4e-31
                 xxxxxxxxxxxxxxxxxxxxx..............xxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx RF
      CitMHS   2 vllileklrldvvallvlvll..............vltiee....alsgiaspiillllgamiigaaleetGlfdrlaakllrlaggkrd.llvllvll 81 
                 +l+++e+++l ++al++  l                l+++e    +++++  p+ill+lg+ +i+aal++  +++r+a+ +l++ag k++ +l+ ++++
  KHJ32220.1 420 LLWATEVIPLFATALMIPFLCvvlrivrsddiphnRLEPNEaakyIFAAMWTPVILLMLGGLTIAAALSKYDIARRIATAMLSKAGDKPKtVLLTTMFV 518
                 6999***********99888898886666655555555555999999999999********************************************** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxx.xxxxxxxxx RF
      CitMHS  82 tallsafvsndgvvlimipivlslakrlkklppl...lliplalaaniggaltpiGtpttraa......arpglslpnllllalllvgl.lplvllfmf 170
                 +a+ s++vsn ++ +++ +++ +l + l  ++p+   +++ +ala+n+gg+l+pi  p  + a       + +l+++++ +++ l+ +l + +vl+++f
  KHJ32220.1 519 AAFASMWVSNIAASVLCFSVIQPLLRNLPSDSPVskgMVLGIALASNVGGMLSPISSPQNLIAiqfmqpPPSWLVWFFITIPVGLISILlIWMVLILTF 617
                 **********************************************************66666777665555666666666444444333333333333 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxx..................................xxxxxxxxxxxxxxxxxxxxxxx RF
      CitMHS 171 gvalalpvnapkvkkqkaiieaiar.....sllpvatillla..................................ykkveWsvlllfaGvfllvgale 230
                       p +  k    + ++e+++      s+++++ti+ l+                                  +++  W +++l+aG + l++a+ 
  KHJ32220.1 618 -----RPAKGTKIVPLRPVVEKLTGvqlfvSIVTIVTII-LWcfghqlewllgdmgvvaiipafiffgsgvltkedFNNLLWTLIILAAGGLSLGKAVD 710
                 .....3333333333333333333300000233344444.337999999999999999999************************************** PP

                 xxxxxxxxxxxxxx...x.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      CitMHS 231 qtGilealadllga...g.gplvalalvlgliallsafisnvavaalmapialgmapalgllspsplalal 297
                  +G+l+++a  ++a   +  ++++l ++ +li+l+s f+s + +a++++p+++++ ++    +p+p +l++
  KHJ32220.1 711 SSGLLHTIAREISArieNlHIYIVLCIFSILIMLISTFVSHAIAALIILPLLYKVGSNF--DDPHPNLLVM 779
                 *********9996678645666666777888888********************77743..4677766665 PP

>> TFIIA_gamma_N  Transcription initiation factor IIA, gamma subunit, helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       2.7   9.5e+03      19      32 ..     206     219 ..     203     232 .. 0.78
   2 ?   11.2   0.1     8e-05      0.29      20      47 ..     238     265 ..     235     266 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 2.7
  TFIIA_gamma_N  19 DeliqegkIspqla 32 
                    De  q++ I+pq  
     KHJ32220.1 206 DEIKQNKIINPQYH 219
                    88899999999865 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 8e-05
  TFIIA_gamma_N  20 eliqegkIspqlamkVLeqFDksineaL 47 
                    el++  +++    mkVL++FDk i + L
     KHJ32220.1 238 ELMSFIQLNRIGFMKVLKKFDKIIGKSL 265
                    6677777777788***********9988 PP

>> TipE  Na+ channel auxiliary subunit TipE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.5       1.1   3.9e+03     158     208 ..     141     190 ..     110     215 .. 0.56
   2 ?   10.5   0.2   6.8e-05      0.24       9      44 ..     373     407 ..     365     426 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.1
        TipE 158 gsdnagvdidigaggrlkrlstadadssdglleesknegglgrtafkslli 208
                  +d+a  d d+     l++ s+ + ++ +   + s n +  +rt++k +l 
  KHJ32220.1 141 STDDASEDDDVDENTALQK-SHHEPENVESTSNVSVNRRRKHRTGMKESLD 190
                 4444444444444444433.3344444444555555666666666665553 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 6.8e-05
        TipE   9 ttrekllfyttaffillGtfslfaflflvpfviepa 44 
                 +   k lf +t ++ llG fs+f ++fl p+ +ep 
  KHJ32220.1 373 SLFPKWLFNSTMYY-LLGIFSVFLIIFLAPINLEPE 407
                 44568899888766.89*****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (847 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1308  (0.0729544); expected 358.6 (0.02)
Passed bias filter:                      612  (0.0341346); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.77u 0.33s 00:00:01.10 Elapsed: 00:00:00.45
# Mc/sec: 5665.67
//
Query:       KHJ32221.1  [L=174]
Description: hypothetical protein EV44_g3036 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       901  (0.0502538); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1274.95
//
Query:       KHJ32222.1  [L=291]
Description: putative duf726 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.8e-06   25.9   0.0      2e-05   24.8   0.0    1.6  1  Glu-tRNAGln   Glu-tRNAGln amidotransferase C subunit
  ------ inclusion threshold ------
      0.065   13.4   3.2      0.089   13.0   1.2    2.2  2  MATH          MATH domain
       0.22   11.8   3.2       0.27   11.5   0.1    2.6  3  CLIP          Regulatory CLIP domain of proteinases
        5.3    7.3   6.0        2.5    8.3   0.7    2.7  3  CytadhesinP1  Trypsin-sensitive surface-exposed protein


Domain annotation for each model (and alignments):
>> Glu-tRNAGln  Glu-tRNAGln amidotransferase C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   4.5e-09     2e-05       2      44 ..     164     203 ..     163     228 .. 0.82

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 4.5e-09
                  -HHHHHHHHHHHHHHHHHHTTCGCS--TT----S..-EB-S-- CS
  Glu-tRNAGln   2 seeEleklakelnsildyveqLqevdttgveplthpvlReDev 44 
                  ++++le+l ++l+s+l++v ++q v+t+g++pl  +   +De 
   KHJ32222.1 164 DPSQLEDLREDLQSQLNFVRKIQCVNTEGIKPLVCV---RDET 203
                  57899***************************9887...5553 PP

>> MATH  MATH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   1.2     2e-05     0.089      18      94 ..      10      86 ..       4      96 .. 0.80
   2 ?   -0.9   0.0       0.4   1.8e+03      72      86 ..     235     249 ..     186     275 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2e-05
        MATH 18 eerfnipWrlkikrkngflglyLrcnkeeelerkwsieveftlklvssngksvkkkdt..hkfekekgwgwgkfiswdk 94
                 +++++++ l ++r++++++ y + n + +l+ + + + e tl++ s+ng+s++ + +  ++++ +k+ ++ k+i  dk
  KHJ32222.1 10 KIMASLKFSLLVNRSSRNFQYYRCKNFHAKLNSNFQRRHESTLSINSENGNSSSDSSErcKSINDNKQSDLFKLI--DK 86
                678899**************998888899999********************66666646777777777666654..44 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.4
        MATH  72 kkdthkfekekgwgw 86 
                 k+++h  ++e++w++
  KHJ32222.1 235 KQESHILTEETEWDV 249
                 333355555554443 PP

>> CLIP  Regulatory CLIP domain of proteinases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.4      0.63   2.8e+03      16      34 ..      32      50 ..      28      78 .. 0.58
   2 ?   -1.0   0.1      0.49   2.2e+03      16      43 ..      68      98 ..      65     114 .. 0.60
   3 ?   11.5   0.1   6.1e-05      0.27      31      54 ..     176     198 ..     165     198 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.63
        CLIP 16 qCpallqllrtnllsserv 34
                +C++++  l++n + ++++
  KHJ32222.1 32 RCKNFHAKLNSNFQRRHES 50
                6666666655555433333 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.49
        CLIP 16 qCpallqllrtnll...sservnflkksqCg 43
                +C+++ +  ++ l    ++ + + lk+  C+
  KHJ32222.1 68 RCKSINDNKQSDLFkliDKFEDSILKDIDCS 98
                5666666644433333344556777777777 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 6.1e-05
        CLIP  31 servnflkksqCgsnesaykplVC 54 
                 +++ nf++k qC  n +  kplVC
  KHJ32222.1 176 QSQLNFVRKIQCV-NTEGIKPLVC 198
                 5789********9.889******* PP

>> CytadhesinP1  Trypsin-sensitive surface-exposed protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.68   3.1e+03       9      28 ..      46      67 ..      40      84 .. 0.61
   2 ?    0.2   0.3      0.19   8.5e+02      25      41 ..      96     112 ..      73     113 .. 0.83
   3 ?    8.3   0.7   0.00056       2.5      12      40 ..     116     144 ..     113     148 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.68
  CytadhesinP1  9 qrrhpsw..ntftgFglsgtdn 28
                   r + ++  n   g+ +s+++ 
    KHJ32222.1 46 RRHESTLsiNSENGNSSSDSSE 67
                  3333333668888888888843 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.19
  CytadhesinP1  25 gtdnkkdgfqkeneskk 41 
                   + +++k+ f++  +++k
    KHJ32222.1  96 DCSHTKQMFKNDDDIDK 112
                   67899******999876 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.00056
  CytadhesinP1  12 hpswntftgFglsgtdnkkdgfqkenesk 40 
                   +p+w t+  +g++g +n kd+f++ +++ 
    KHJ32222.1 116 EPTWSTTYEYGQKGKKNPKDKFENPQDIL 144
                   89*********************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1017  (0.0567237); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2168.32
//
Query:       KHJ32223.1  [L=807]
Description: putative pre-rrna processing protein tsr1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.6e-108  361.9   0.0   9.6e-108  360.0   0.0    1.9  2  RIBIOP_C  40S ribosome biogenesis protein Tsr1 and BMS1 C-ter
    2.9e-16   59.3   0.0      8e-16   57.9   0.0    1.8  1  AARP2CN   AARP2CN (NUC121) domain


Domain annotation for each model (and alignments):
>> RIBIOP_C  40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.17   1.5e+03      10      66 ..      22      81 ..      16     144 .. 0.68
   2 !  360.0   0.0  1.1e-111  9.6e-108       1     292 []     487     788 ..     487     788 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.17
    RIBIOP_C 10 rerfakyrglkslrtsewdpkenlpeeyarif.efenfketkkrvlkeale..eregveg 66
                + r a +  lk++++ + d+  + ++ +++++ + +  +++++++l++++e  +++++ +
  KHJ32223.1 22 KSRKATKGFLKEIQKGKLDKATQRKNPHQQVMsKLDRRNQNRQKLLAKQKEhsQETKIFA 81
                556667777888999999988885555555540445555666666665555333334333 PP

  == domain 2  score: 360.0 bits;  conditional E-value: 1.1e-111
    RIBIOP_C   1 vetpedvearerfakyrglkslrtsewdpken...lpeeyarifefenfketkkrvlkealeeregvegGtyvrleiknvpeelveeknfdekkplivf 96 
                 +e++++v arer+a+yrglks+rts+w+++e+   +p+e++r++e++nfk+++ rv++eal+  +gv +Gt+vr+++++vp +l+++  +++++pl +f
  KHJ32223.1 487 IELHPKVLARERLARYRGLKSIRTSTWEEEEDrafEPQEWRRLLEVQNFKSARSRVTREALA--GGVVAGTRVRVYLRDVPLSLKAS-WTNSNYPLGLF 582
                 68999*********************************************************..*****************999995.5899******* PP

    RIBIOP_C  97 gllphEekvsvvnvrikrhreyekpikskdplifsvGfRrfqakPifsqed.tknnkhklerylkpghtcvatfygpitfpntpvlafkel........ 186
                 +ll+hE+k++vvn+++  +++y++piksk ++++++G Rrf ++P+fsq+  tknn+ k++r+l pg+++vatf++p+t++++p l+fk++        
  KHJ32223.1 583 SLLRHEQKQTVVNFSVSLSSDYPEPIKSKAEMVLQCGSRRFIVNPLFSQSGiTKNNVYKFNRFLYPGQSAVATFIAPLTWGSVPSLLFKRVnnsdpmeg 681
                 ***************************************************769***********************************8888899998 PP

    RIBIOP_C 187 .sskeasfrlvatGsvlevdpsriivkrivLtGhpfkihkktaviryMFfnpedvawFkpveLrTksGrrGhIkeslgthGyfkatFddklkqsDiVlm 284
                  +  +a++++v t + l +++sr+i+krivLtGhp++ihkk +++ryMFfn+edv+wFk+++L+Tk+Gr+G+Ike+lgthGyfkatFd+k++++D V +
  KHJ32223.1 682 sELLQAPLNFVSTCTSLAPSTSRVIAKRIVLTGHPYRIHKKLVTVRYMFFNREDVEWFKALQLWTKRGRTGYIKEPLGTHGYFKATFDGKINPQDAVSI 780
                 8555799******************************************************************************************** PP

    RIBIOP_C 285 slYkrvfp 292
                 slYkr++p
  KHJ32223.1 781 SLYKRMWP 788
                 ******98 PP

>> AARP2CN  AARP2CN (NUC121) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9   0.0   8.9e-20     8e-16       1      83 [.     231     304 ..     231     306 .. 0.96

  Alignments for each domain:
  == domain 1  score: 57.9 bits;  conditional E-value: 8.9e-20
     AARP2CN   1 EilnllrfisvqkfrplswReqrpyiladrveiltdseskeeeskedrtlsveGyvrGsplsanqlvHipglGDfqiekiekl 83 
                 ++ nllr i+++ ++ ++wR++r+++l+d+v + ++s+++         ++++G+vrG++l+a++lv + ++G fqi ki+++
  KHJ32223.1 231 DCVNLLRSICTVMPKGIHWRDERSWMLVDEVLWPENSDDS---------VVLTGTVRGKGLKADRLVQVGDWGIFQIIKITAA 304
                 578******************************9999999.........*******************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (807 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       940  (0.052429); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.42
# Mc/sec: 5708.31
//
Query:       KHJ32224.1  [L=611]
Description: putative duf726 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   5.8e-127  423.3   4.4   7.7e-127  422.9   4.4    1.1  1  DUF726         Protein of unknown function (DUF726)
     0.0017   18.5   0.0     0.0039   17.3   0.0    1.5  1  Thioesterase   Thioesterase domain
  ------ inclusion threshold ------
      0.082   12.4   0.0       0.15   11.6   0.0    1.3  1  RecT           RecT family
       0.24   12.0   0.0       0.45   11.1   0.0    1.4  1  Abhydrolase_6  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> DUF726  Protein of unknown function (DUF726)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  422.9   4.4  1.7e-130  7.7e-127       4     343 .]     255     600 ..     252     600 .. 0.97

  Alignments for each domain:
  == domain 1  score: 422.9 bits;  conditional E-value: 1.7e-130
      DUF726   4 krylliglAglaGgaligltggLaaPlvaagigallaglGltgsaa..fLasvggsa.vitallgaagAklsvkkmkkrvkeikdFefiplseqirl.. 97 
                  +  ++glAg+aG+++ig+tggLa+Plva+++g++++glGl+++++  +L+++++s+ +i+ l+ga+gAk++ k +++  ke++dF+fi l++ + +  
  KHJ32224.1 255 SHICKLGLAGVAGATVIGITGGLATPLVAGAVGTIMGGLGLGATTIsgLLGAIAQSSiIIGGLFGAYGAKMTSKAIDSYAKEVNDFKFISLNSFKGQen 353
                 57789**********************************998888788******99999********************************99887788 PP

      DUF726  98 ....ksltvtvsislelsdeddvtapwralakaekdlYalkwEvelLkelGkaletilasealsvakqeilkrtvlaslvaaltWPlaLlkvakildnp 192
                     ++l+vt+++s++l++e+d+ +pw  l +  ++++ l+wE e+L elG+++++++ s+a++vak+ei++rtv++sl++al WPl++lkv+ki+dnp
  KHJ32224.1 354 mlenRRLRVTITVSGWLTQEEDLINPWCVLGRE-NEVFPLRWELEALRELGNSMNSLVNSTAWKVAKKEIIARTVFSSLMQAL-WPLSILKVSKIIDNP 450
                 89999***************************9.*************************************************.*************** PP

      DUF726 193 wnvsleraakaGklLAdallsraqGeRpvtLiGfslGARviyvCLlelakkkalglvenvillGaPvtteakvwlkvrsvvsgRlvnvysenDylLgfl 291
                 ++++++ra+kaG +LAda+++++qGeRpvtLiG+slGAR iy+CL+ la+++ +gl+e v+l+GaP+++ +  w  +rsvvsgRlvnvys nDy+L+fl
  KHJ32224.1 451 FSICMNRADKAGIILADAIINKSQGERPVTLIGYSLGARLIYSCLISLAERHIFGLIESVVLMGAPIPSTEAIWRPMRSVVSGRLVNVYSTNDYILAFL 549
                 *************************************************************************************************** PP

      DUF726 292 yRtssaqfrvaglqrieldvekvenvdvselvegHldYrkklkkilkaigle 343
                 yRt s+q+ vag+q+i+ + ++ven+dvse+v+gHl Yr+++  il++ig+e
  KHJ32224.1 550 YRTWSVQYGVAGIQEIK-GQTRVENIDVSEIVNGHLTYRHSVGIILEKIGWE 600
                 *****************.58******************************96 PP

>> Thioesterase  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   8.7e-07    0.0039      58     116 ..     469     528 ..     465     534 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 8.7e-07
                   HHHHH-SSSSEEEEEETHHHHHHHHHHHHHHHC..T-SEEEEEEESCCCCCCHHCHHCCCH CS
  Thioesterase  58 alrqiqpegPyalfGhSlGgllAfevArqLesq..Glavkslflidssapseteaqeasrr 116
                   +++++q e P++l+G+SlG+ l +     L ++     + s++l +++ ps+ ea ++++r
    KHJ32224.1 469 IINKSQGERPVTLIGYSLGARLIYSCLISLAERhiFGLIESVVLMGAPIPST-EAIWRPMR 528
                   7899**********************99999998855589**********99.88888776 PP

>> RecT  RecT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   3.3e-05      0.15     102     181 ..     365     442 ..     336     449 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.3e-05
        RecT 102 evkgtaedergeligayavvklkdgeepfveemsleeiekrrs.kssktnsspWakdpeeMakKtalkqalrkalplsieg 181
                 +v+g+    +++li  ++v+ + ++  p+   + le  ++  +  +s  ns+ W+   +e +++t+ +++++  +plsi +
  KHJ32224.1 365 TVSGWL-TQEEDLINPWCVLGRENEVFPL--RWELEALRELGNsMNSLVNSTAWKVAKKEIIARTVFSSLMQALWPLSILK 442
                 555663.4458999999999888888885..88888888875535566667***************************974 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0    0.0001      0.45      59     110 ..     468     525 ..     453     567 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.0001
                    CTT.....TTSEEEEEETCHHH.....HHHHHHHCC....EE.EEES-..----TTTS----T CS
  Abhydrolase_6  59 elaa...gggpvvlvGHSlGGa.....lalaaapla..lvvg.vlldppptalpagllaaale 110
                    ++++   g +pv l+G+SlG+      l ++a ++   l+++ vl+ +p    p ++  a+++
     KHJ32224.1 468 AIINksqGERPVTLIGYSLGARliyscLISLAERHIfgLIESvVLMGAP---IPSTE--AIWR 525
                    333366688999*********9555552222333558876778888882...22222..2222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (611 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       826  (0.0460706); expected 358.6 (0.02)
Passed bias filter:                      556  (0.0310112); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 4061.31
//
Query:       KHJ32225.1  [L=528]
Description: putative u3 small nucleolar rna-associated protein 7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-37  127.0   0.0    4.1e-35  119.4   0.0    3.2  3  BING4CT        BING4CT (NUC141) domain
    4.7e-08   33.2   0.0        7.2    7.0   0.0    6.2  5  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    0.00021   20.5   0.5     0.0055   15.8   0.0    2.3  2  Coatomer_WDAD  Coatomer WD associated region
     0.0014   19.4   0.0        0.6   11.1   0.0    4.2  5  WD40           WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> BING4CT  BING4CT (NUC141) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.15   6.9e+02       8      25 ..     206     223 ..     201     231 .. 0.78
   2 ?    2.8   0.0     0.023     1e+02      14      44 ..     254     284 ..     245     292 .. 0.84
   3 !  119.4   0.0   9.2e-39   4.1e-35       1      79 []     374     452 ..     374     452 .. 0.99

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.15
     BING4CT   8 pgskieslrFvpfeDvlg 25 
                 ++ ++++++F p++ +l+
  KHJ32225.1 206 KHIEVTNMEFLPYHFLLA 223
                 556899*******98776 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.023
     BING4CT  14 slrFvpfeDvlgvghskgissiivPGsGepn 44 
                 sl+  p + +l +gh++g  ++  P s +p 
  KHJ32225.1 254 SLTQNPQNAILHMGHHNGTVTLWSPNSTTPL 284
                 5666677889****************99885 PP

  == domain 3  score: 119.4 bits;  conditional E-value: 9.2e-39
     BING4CT   1 pYlthklpgskieslrFvpfeDvlgvghskgissiivPGsGepnfdaleanpfetkkqrrereVrsLLeKlqpelItld 79 
                 pY+++  +g++ie+++++pfeD+lg++hs+g+ssii+PG+Gepnfd++e np et+kqr+e+eVrsL++Klqpe+I+l+
  KHJ32225.1 374 PYMSWAGEGKHIERVKWCPFEDILGISHSHGFSSIIIPGAGEPNFDSYEINPQETTKQRQETEVRSLINKLQPEMISLN 452
                 7***************************************************************************996 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.017        77      46      81 ..     135     170 ..     132     176 .. 0.84
   2 ?    4.0   0.0     0.013        59      37      67 ..     167     196 ..     163     202 .. 0.81
   3 !    4.8   0.0    0.0076        34      37      80 ..     206     249 ..     201     258 .. 0.88
   4 !    7.0   0.0    0.0016       7.2      36      82 ..     289     335 ..     250     353 .. 0.55
   5 ?    3.9   0.0     0.015        66      36      64 ..     380     408 ..     356     420 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.017
  ANAPC4_WD40  46 WkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  +  +g+ L  a ++g+v  +d  +gk+  +++ +++
   KHJ32225.1 135 YTRNGRHLLLAGKKGHVATMDWRDGKLGCEIQLGET 170
                  6789*********************99888777665 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.013
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrllda 67 
                   +++vr+ +W ++++l+ava ++  v ++da
   KHJ32225.1 167 LGETVRDAKWLHNNQLFAVAQKK-YVYIYDA 196
                  5789***************9764.5666665 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.0076
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                  +  ev+++++ p   lLa + + g +r  d+++gk+v +l++  
   KHJ32225.1 206 KHIEVTNMEFLPYHFLLATVGNPGCLRYQDISTGKIVIELPTRL 249
                  56799********************************9998765 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.0016
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksek 82 
                  ++ + vr++    +g+ ++ + +d ++ + d+ + k v+s+s+ +  
   KHJ32225.1 289 AHRGPVRAIGVDREGRYMVSGGQDLKMVVWDIRTFKEVSSYSTRQPA 335
                  34455666666666666666666666666666666666666666555 PP

  == domain 5  score: 3.9 bits;  conditional E-value: 0.015
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrl 64 
                  +e+++++ ++W p + +L +++s g  ++
   KHJ32225.1 380 GEGKHIERVKWCPFEDILGISHSHGFSSI 408
                  68899999999999999999999986665 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.2     0.013        60     263     333 ..      54     116 ..      38     125 .. 0.87
   2 !   15.8   0.0   1.2e-06    0.0055     118     171 ..     141     195 ..     118     212 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.013
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXX-GGGSS-HHHHHHHHHHT CS
  Coatomer_WDAD 263 idlselefktavlrkdleevlkiiaasnllpeipkeegqkiirfLekkgypelAlqlvqDpetkFdLAlel 333
                    i  + l+ k++v++++++++  + + +++l       +++ +  Le ++ +e  +++ qD+  + ++A+e+
     KHJ32225.1  54 IRDKKLRRKLKVIEEKYKTATLQAKDAEIL-------HENEAGLLEPENELERTYKVRQDE-IQAEIAVET 116
                    667789999**********99999999999.......99*****************99985.667888887 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 1.2e-06
                    XXXXXXXXX.XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD 118 alLgvksegsvsfYDweqgklvrridvkk.vknVvwsddgelvalvskdtvyils 171
                    +lL++ ++g v+  Dw  gkl  +i++ + v++  w  +++l+a+++k+ vyi++
     KHJ32225.1 141 HLLLAGKKGHVATMDWRDGKLGCEIQLGEtVRDAKWLHNNQLFAVAQKKYVYIYD 195
                    5888888889****************9988**********************987 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.37   1.6e+03      13      38 .]     171     195 ..     138     195 .. 0.80
   2 ?   -1.1   0.0      0.94   4.2e+03       3      27 ..     200     224 ..     198     232 .. 0.75
   3 ?    1.4   0.0      0.15   6.6e+02      15      38 .]     254     277 ..     243     277 .. 0.74
   4 !   11.1   0.0   0.00013       0.6       6      38 .]     286     319 ..     281     319 .. 0.89
   5 ?   -2.8   0.0       3.4   1.5e+04      11      24 ..     383     396 ..     375     401 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.37
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 v++ ++ ++++++a +  ++ v+i+d
  KHJ32225.1 171 VRDAKWLHNNQLFAVAQ-KKYVYIYD 195
                 77888999999987644.99999987 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.94
                 EEEEEESSSSEEEEEEETTSSEEEE CS
        WD40   3 clrtltGHssvtslafspdgawlas 27 
                  l+ l+ H  vt + f p++ +la+
  KHJ32225.1 200 ELHCLKKHIEVTNMEFLPYHFLLAT 224
                 5788888833899999999888886 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.15
                 EEEEETTSSEE.EEEETTSEEEEEE CS
        WD40  15 slafspdgawl.asGsdDgtvriWd 38 
                 sl  +p +a l + G+ +gtv +W+
  KHJ32225.1 254 SLTQNPQNAILhM-GHHNGTVTLWS 277
                 5554555555437.999*******5 PP

  == domain 4  score: 11.1 bits;  conditional E-value: 0.00013
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++ +H ++v+++ ++++g++++sG+ D +  +Wd
  KHJ32225.1 286 KILAHrGPVRAIGVDREGRYMVSGGQDLKMVVWD 319
                 55589999*************************9 PP

  == domain 5  score: -2.8 bits;  conditional E-value: 3.4
                 SSEEEEEEETTSSE CS
        WD40  11 ssvtslafspdgaw 24 
                 +++  ++++p  + 
  KHJ32225.1 383 KHIERVKWCPFEDI 396
                 45999999987776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (528 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       911  (0.0508115); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 3741.33
//
Query:       KHJ32226.1  [L=228]
Description: putative mitochondrially-localized peptidyl-trna hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-45  154.7   0.1    1.5e-45  154.3   0.1    1.2  1  PTH2      Peptidyl-tRNA hydrolase PTH2
  ------ inclusion threshold ------
      0.022   14.8   0.0      0.042   13.9   0.0    1.4  1  GPHR_N    The Golgi pH Regulator (GPHR) Family N-terminal


Domain annotation for each model (and alignments):
>> PTH2  Peptidyl-tRNA hydrolase PTH2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.3   0.1   1.7e-49   1.5e-45       1     117 []     112     228 .]     112     228 .] 0.96

  Alignments for each domain:
  == domain 1  score: 154.3 bits;  conditional E-value: 1.7e-49
                 EEEEEEEESSSSS-HHHHHHHHHHHHHHHHHHHHHH.CHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTT-SEEEEEETSSSSSSTTCEEEEEE CS
        PTH2   1 lkmvlvvrkDLkmskGkiaaqcahAavalvkkllkesnekellkeWeeegqkkivlkveseeeLlelaakakalglpaalirDagrtqiepgtkTvlai 99 
                 +kmvlvvr+DL+m+kGkiaaqc+hAa+a++k++l ++  +  l++We++gq+ki+l+v+s++eLl+l+a a +l ++a++i+Dagrtqi++g++Tvl+i
  KHJ32226.1 112 CKMVLVVRTDLGMTKGKIAAQCSHAAIACYKNMLFSNPTSPSLRKWERQGQAKIALQVKSQDELLTLHAIALSLDVVAEIITDAGRTQIASGSQTVLGI 210
                 7******************************98887433589********************************************************* PP

                 EEEEHHHHHHHHTTSEB- CS
        PTH2 100 gPapksivdkvtgkLkll 117
                 gPap+si+d++tg Lkll
  KHJ32226.1 211 GPAPRSIIDQITGTLKLL 228
                 ****************97 PP

>> GPHR_N  The Golgi pH Regulator (GPHR) Family N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   4.6e-06     0.042      11      48 ..      10      58 ..       8      77 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.6e-06
      GPHR_N 11 vsviGvtlmAiLSG..fGavstpyetfslf.........krpvteadin 48
                v+++G++++A  SG  +Ga+s+  ++fs+          +r++++++i 
  KHJ32226.1 10 VTLLGTVIVAGVSGylIGATSSSRKFFSKTasisslipgSRTINDNKIE 58
                7899**********999***********944556667776666644443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1649.67
//
Query:       KHJ32227.1  [L=71]
Description: hypothetical protein EV44_g3224 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       232  (0.0129399); expected 358.6 (0.02)
Passed bias filter:                      204  (0.0113782); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.21s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 564.32
//
Query:       KHJ32228.1  [L=425]
Description: putative mitochondrial export translocase oxa1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-15   58.0   5.3      1e-15   58.0   5.3    1.4  2  60KD_IMP  60Kd inner membrane protein


Domain annotation for each model (and alignments):
>> 60KD_IMP  60Kd inner membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.0   5.3   5.8e-20     1e-15       1     165 [.      75     268 ..      75     269 .. 0.83
   2 ?   -5.2   1.5         1   1.8e+04      39      58 ..     388     407 ..     377     412 .. 0.51

  Alignments for each domain:
  == domain 1  score: 58.0 bits;  conditional E-value: 5.8e-20
    60KD_IMP   1 yglaIilltiivrlillpltlkqlkssakmqelqPelkeiqekyk......kdk...qklqqemmklYkkegvnplaGclplLiqlpifialyrvlrsl 90 
                 +++ I +  i+vrl+l+  ++ ++++  +m+ ++P  k + +k+       + +    + +qe++ +Yk++g+ ++++ +p Liq++i ++ +r+l+ +
  KHJ32228.1  75 WWITITVTAILVRLALFRPYIASAENATRMAIVNPIAKPVINKMMaaqragD-QaafFQYKQEQTLMYKRAGIKMWKSGIP-LIQMVIGFSTFRLLNGM 171
                 7899*********************************999999987887742.323567899**************99888.79**************9 PP

    60KD_IMP  91 a.......sf....wikdLsapd....lpillavttflqqkls.......kskkmqkmmlyvmplmilffslsfpaglvlYwlvsnllsiaqqliin 165
                 a       ++    w+++Ls  d    lp+ +a+t +l +k         ++ km +++ + +pl+ ++f+  +p+++ l +++s +ls++q  +++
  KHJ32228.1 172 AklpvpglETggvlWFQNLSVADplyiLPLATAATLHLVMKKGgetgvqtMNPKMFSLLKWGFPLISVIFTSWLPSAVQLTFFISGILSLVQASLLR 268
                 96666665116666*******999888888888888777555533333222236667888********************************98765 PP

  == domain 2  score: -5.2 bits;  conditional E-value: 1
    60KD_IMP  39 eiqekykkdkqklqqemmkl 58 
                 ei+++   +k+k+++e  +l
  KHJ32228.1 388 EIRQREIYEKKKQEEEWKAL 407
                 34444434555566665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1272  (0.0709465); expected 358.6 (0.02)
Passed bias filter:                      583  (0.0325172); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.39
# Mc/sec: 3264.73
//
Query:       KHJ32229.1  [L=336]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.071   13.4   0.3        5.7    7.3   0.0    2.4  2  RESP18    RESP18 domain
       0.11   12.8   0.0       0.25   11.6   0.0    1.6  1  DUF5485   Family of unknown function (DUF5485)


Domain annotation for each model (and alignments):
>> RESP18  RESP18 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1    0.0073        66      43      76 ..      51      84 ..      25     121 .. 0.83
   2 ?    7.3   0.0   0.00064       5.7      41      60 ..     215     234 ..     198     243 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0073
      RESP18 43 tqevltqkmerisrlrpqdpclkdrkavfptrtt 76
                t++++t    +  r +p++p+ ++ +  +  r+ 
  KHJ32229.1 51 TPRLITSTTTHTERVKPREPIANESSWSTVFRNR 84
                8999****************99988755554443 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.00064
      RESP18  41 dltqevltqkmerisrlrpq 60 
                 ++t+e+l+q++er+ ++rp 
  KHJ32229.1 215 EVTKELLSQEIERVTKMRPS 234
                 689***************95 PP

>> DUF5485  Family of unknown function (DUF5485)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.8e-05      0.25      29      47 ..      45      63 ..      33      66 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.8e-05
     DUF5485 29 vdaklytPrfifcatshfv 47
                 d+k+ytPr+i  +t+h  
  KHJ32229.1 45 ADTKVYTPRLITSTTTHTE 63
                478*************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       818  (0.0456244); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 2657.14
//
Query:       KHJ32230.1  [L=205]
Description: hypothetical protein EV44_g0599 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        1.3    8.6  11.9       0.98    9.0  10.9    1.3  1  CAC1F_C   Voltage-gated calcium channel subunit alpha, C-term


Domain annotation for each model (and alignments):
>> CAC1F_C  Voltage-gated calcium channel subunit alpha, C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0  10.9   5.5e-05      0.98      46     151 ..      90     196 ..      70     205 .] 0.69

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 5.5e-05
     CAC1F_C  46 elesqpesrrssavsvsltveeelpdsls.apsddrgvsskissrkpsvkqslssetkrsskvevltedsegsaklkaevsgekglekqeeeeeevvss 143
                 + + ++ s + +++++     + +p+ l+ +++d +g+++++ + +++++ s+s++++++sk e  +++++++a+ + +   + g +++++++e+ +ss
  KHJ32230.1  90 DANKNAISAQGAKTTDDQRNANTIPSILQsSSTDANGQNMAALKLRSTAGVSGSTSSNKNSKNENRKRNNQDTANERFNNRNRGGNKNNDNKDEQGASS 188
                 333344455556666666668899999996777888888888899999******999999999999999998888887777777777777766666444 PP

     CAC1F_C 144 ekraalde 151
                 +++ +  +
  KHJ32230.1 189 SNQRQSGD 196
                 44443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1713  (0.0955435); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.29s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 1521.59
//
Query:       KHJ32231.1  [L=389]
Description: hypothetical protein EV44_g3101 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.4e-09   35.8   1.1    8.6e-09   35.2   1.1    1.3  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type
     0.0025   18.2   0.9     0.0059   17.0   0.9    1.6  1  FAM219A          Protein family FAM219A
  ------ inclusion threshold ------
      0.071   13.3   0.0       0.18   12.1   0.0    1.7  1  PRODH            Proline utilization A proline dehydrogenase 
      0.075   13.1   0.7       0.16   12.1   0.7    1.5  1  TssO             Type VI secretion system, TssO


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   1.1   1.9e-12   8.6e-09       4     137 ..      88     223 ..      85     224 .. 0.91

  Alignments for each domain:
  == domain 1  score: 35.2 bits;  conditional E-value: 1.9e-12
  Retrotran_gag_2   4 kdakalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsa....lgvkiddedk 93 
                      ++a a+ ++++s+s +   l +e++ta+++W  Lk+ y+++++++   ++    ++ + +  s+ +  +kl++  ++L a    ++++  d  +
       KHJ32231.1  88 DEATAIDYLFKSLSLDDQALYDEHDTAYDLWLYLKKKYQQTDPTTANEYMTLIQTFTIGDM-SIINAWDKLKDFRRKLCAadpeAKDTYRDRAL 180
                      6788999*************************************99999999999999988.9***************9955555566777789 PP

  Retrotran_gag_2  94 vvllLasLPesyetfvtaiesseedltleevieklleeeerrke 137
                      +++l + LP+++   ++++++ + dl++ee  ++l+  e+r+ +
       KHJ32231.1 181 LLILIRALPKDFTSTIDTLDA-QPDLSVEEKLKRLQTKESRLVN 223
                      99******************9.899*************999765 PP

>> FAM219A  Protein family FAM219A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.9   1.3e-06    0.0059      17      65 ..     308     357 ..     289     368 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.3e-06
     FAM219A  17 lasavesqPkktrkrsvkfnkgyaalsqepdeklvsldsdsdeele.sry 65 
                  +s  +s Pk+ ++  +k  ++y alsq+ +++  sl sd  +e e ++ 
  KHJ32231.1 308 NPSRPSSLPKHRKRTDLKKSRAYEALSQSNSDTEASLTSDESDECEhAQI 357
                 233334556666666799**********************9999984444 PP

>> PRODH  Proline utilization A proline dehydrogenase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.9e-05      0.18       9      43 ..      83     117 ..      82     121 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.9e-05
       PRODH   9 aayRrpEaecVapLleaArlpeaeraairalArkL 43 
                 + y+r+Ea+++  L    +l++++    +++A++L
  KHJ32231.1  83 EKYLRDEATAIDYLFKSLSLDDQALYDEHDTAYDL 117
                 67************************999999998 PP

>> TssO  Type VI secretion system, TssO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.7   3.6e-05      0.16      33     117 ..      58     143 ..      47     146 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.6e-05
        TssO  33 kssplqekeil.lkelerkkkfeekqkelkkkvdsiykkIdsLkpevnavfleneIkkdln.dikntygknssdeRykmyaqiakfy 117
                 ++++l++++    ++ e + ++e++ k l+++   i++  +sL+ +++a + e++  +dl   +k++y++++ +   + y+ +++++
  KHJ32231.1  58 ENLDLKQEQNSsTSRTEGIMNLEKREKYLRDEATAIDYLFKSLSLDDQALYDEHDTAYDLWlYLKKKYQQTDPTT-ANEYMTLIQTF 143
                 5677788888889**********************************************9627899999999998.78888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       913  (0.0509231); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 3065.94
//
Query:       KHJ32232.1  [L=449]
Description: putative s-adenosyl-l-homocysteine hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   9.5e-128  425.5   0.0    1.9e-73  247.2   0.3    2.1  2  AdoHcyase      S-adenosyl-L-homocysteine hydrolase
    3.5e-82  274.3   2.6    5.2e-82  273.7   2.6    1.3  1  AdoHcyase_NAD  S-adenosyl-L-homocysteine hydrolase, NAD bindi
    2.1e-07   30.5   0.1    5.1e-07   29.2   0.1    1.6  1  2-Hacid_dh_C   D-isomer specific 2-hydroxyacid dehydrogenase,
    0.00077   19.1   0.3     0.0014   18.2   0.3    1.3  1  IlvN           Acetohydroxy acid isomeroreductase, NADPH-bind
     0.0038   17.0   0.1     0.0066   16.2   0.1    1.4  1  ELFV_dehydrog  Glutamate/Leucine/Phenylalanine/Valine dehydro


Domain annotation for each model (and alignments):
>> AdoHcyase  S-adenosyl-L-homocysteine hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.2   0.3   5.4e-77   1.9e-73       1     138 [.       7     144 ..       7     145 .. 0.99
   2 !  177.8   0.0   7.6e-56   2.7e-52     171     299 .]     144     448 ..     143     448 .. 0.96

  Alignments for each domain:
  == domain 1  score: 247.2 bits;  conditional E-value: 5.4e-77
                 --B-S-GGGHHHHHHHHHHHHCC-HHHHHHHHHCTTT-TTTT-EEEEES--SHHHHHHHHHHHHTT-EEEEE-SSTTT--HHHHHHHCCTTEEEE--TT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   AdoHcyase   1 dykvkdislaefGrkeielaekempglmalreeyaeekplkgariaGslhmtiqtavLietLvalGaevrWasCnifstqdeaaaaiaeagvpvfawkg 99 
                 ++kv+d+sla+fGrkeielae+empglma+r++ya+++plkgariaG+lhmtiqtavLietL+ lGaev+W+sCnifstqd+aaaaia+ gvpvfawkg
  KHJ32232.1   7 KFKVADLSLAAFGRKEIELAENEMPGLMATRAKYAQDQPLKGARIAGCLHMTIQTAVLIETLTFLGAEVTWTSCNIFSTQDHAAAAIAAVGVPVFAWKG 105
                 59************************************************************************************************* PP

                 --HHHHHHHHHHCHS-SSTS-S-SEEEESSSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   AdoHcyase 100 etleeywwcieqalkwaedekepnlilDdGGDltllvhk 138
                 et+eey+wc+eq+l   +d+k+ nlilDdGGDlt+lvhk
  KHJ32232.1 106 ETEEEYQWCLEQQLVAFKDNKHLNLILDDGGDLTALVHK 144
                 ***************99*********************8 PP

  == domain 2  score: 177.8 bits;  conditional E-value: 7.6e-56
                 THHCCCHCC--EEEE-SHHHHHHHHHHHHTT---SEEEESTTSHHHCTTH................................................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................................................. RF
   AdoHcyase 171 kkytellkkikGvseetttGvhrLyelakkgkLlvpainvndsvtkskfD................................................. 220
                 kky+e+lk + GvseetttGvh+Ly++ k+++Llvpa+nvndsvtkskfD                                                 
  KHJ32232.1 144 KKYPEMLKGCFGVSEETTTGVHHLYKMLKNNTLLVPAVNVNDSVTKSKFDnlygcreslidgikratdvmiagkiavvagfgdvgkgcalalqgmgarv 242
                 79************************************************************************************************* PP

                 ................................................................................................... CS
                 ................................................................................................... RF
   AdoHcyase 221 ................................................................................................... 220
                                                                                                                    
  KHJ32232.1 243 litevdpinalqaavsgfqvttmekaasqaqifvtttgcrdilvgkhfevmpndaivcnighfdieidvawlkanaqsvqnikpqvdrflmkngrhiil 341
                 *************************************************************************************************** PP

                 ..............S-HHHHHHHHHHHHHHHHHHHHT......TSSS-SS.............EEE--CHHHHHHHHHCCCCCT-------HHHHHCCT CS
                 ..............xxxxxxxxxxxxxxxxxxxxxxx......xxxxxxx.............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   AdoHcyase 221 ..............hpsfvmsasftnqvlaqielfkk......ekkyekk.............vyvlpkklDekvarlhleklgaklteltkeqaeyig 286
                               h+sfvms+sftnqvlaqi lfk       +     k             vyvlpk lDe+va+lhl++++a+lt lt  q+ey+g
  KHJ32232.1 342 laegrlvnlgcatgHSSFVMSCSFTNQVLAQILLFKAqdaefgT-----KyvefgktqklevgVYVLPKILDETVAKLHLAHVNAELTVLTPVQSEYLG 435
                 ************************************53444440.....34555566666777************************************ PP

                 SXTTSXXSXTTXX CS
                 xxxxxxxxxxxxx RF
   AdoHcyase 287 veveGPfkpdhYr 299
                 ++ eGP+k+d Yr
  KHJ32232.1 436 LPIEGPYKSDLYR 448
                 ************8 PP

>> AdoHcyase_NAD  S-adenosyl-L-homocysteine hydrolase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  273.7   2.6   1.5e-85   5.2e-82       1     162 []     194     355 ..     194     355 .. 1.00

  Alignments for each domain:
  == domain 1  score: 273.7 bits;  conditional E-value: 1.5e-85
                    HHHHHCCCCCHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHCT-EEEEE-S-HHHHHHHHCTT-EE--HHHCTTT-SEEEE-SSSSSSB-HHH CS
  AdoHcyase_NAD   1 nlygcreslvdgikratdvllaGkvavvaGyGdvGkGcaaslkglGarvivtevdPicalqaameGfevvtleevvkkadivvtttGnkdiitleh 96 
                    nlygcresl+dgikratdv++aGk+avvaG+GdvGkGca +l+g+Garv++tevdPi+alqaa+ Gf+v+t+e+++++a+i+vtttG++di+  +h
     KHJ32232.1 194 NLYGCRESLIDGIKRATDVMIAGKIAVVAGFGDVGKGCALALQGMGARVLITEVDPINALQAAVSGFQVTTMEKAASQAQIFVTTTGCRDILVGKH 289
                    89********************************************************************************************** PP

                    HCCS-TTEEEEE-SSTTTTBTHHHHHTTT-EEEEEETTEEEEE-TTS-EEEEEGGGSBCHHHTS-- CS
  AdoHcyase_NAD  97 lkkmkddaivcniGhfdseidvaaleanalkkeevkpqvdrvtlkdgkkiillaeGrllnlgcatg 162
                    ++ m +daivcniGhfd eidva+l+ana++++++kpqvdr+ +k+g++iillaeGrl+nlgcatg
     KHJ32232.1 290 FEVMPNDAIVCNIGHFDIEIDVAWLKANAQSVQNIKPQVDRFLMKNGRHIILLAEGRLVNLGCATG 355
                    ****************************************************************97 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.1   1.4e-10   5.1e-07      33     127 ..     213     303 ..     197     316 .. 0.91

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 1.4e-10
                   -GTTSEEEEES-SHHHHHHHHHHHHTT-EEEEESSSHHHHHCHHHHTCEECSHHHHHHH-SEEEE-S--STTTTTSBSHHHHHCSTTTEEEEESS CS
  2-Hacid_dh_C  33 elsgktvGiiGlGrIGqavakrlkafgmkviaydrskkkeeeeeelgvelvsleellaesDivslhlpltpetrhlinaeelakmkkgailiNta 127
                    ++gk   + G+G++G+  a  l+++g++v+++++ + +  +++  g++++++e++ ++++i + ++      r+++  ++++ m+++ai+ N++
    KHJ32232.1 213 MIAGKIAVVAGFGDVGKGCALALQGMGARVLITEVDPINALQAAVSGFQVTTMEKAASQAQIFVTTT----GCRDILVGKHFEVMPNDAIVCNIG 303
                   5789999*****************************998889********************99755....58999*****************98 PP

>> IlvN  Acetohydroxy acid isomeroreductase, NADPH-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.3   3.9e-07    0.0014       2      65 ..     214     276 ..     213     283 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 3.9e-07
                 HHTS-EEEES-SHHHHHHHHHHHHTT--EEEEE-TT-HHHHHHHHTT-EEEEHHHHHHT-SEEE CS
        IlvN   2 lkgkkiaviGyGsqGhaqalnlrdsgldvvvglregsksvkkAkeegfevltvaeavkkadvvm 65 
                 + gk  +v G+G  G+  al l+  g  v ++  +   ++ +A  +gf+v+t+++a+++a++ +
  KHJ32232.1 214 IAGKIAVVAGFGDVGKGCALALQGMGARVLITEVDPI-NALQAAVSGFQVTTMEKAASQAQIFV 276
                 556666778**********************999888.66677789**************9865 PP

>> ELFV_dehydrog  Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1   1.9e-06    0.0066      22     119 ..     206     314 ..     195     353 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.9e-06
                    HHHTTTS-STTEEEEEE--SHHHHHHHHHHHHCT-EE.EEEEESSEEEE.ETTEE-HHHHHHHHHCSSS.STTHSHH...STSTSEEESHHSHHHH CS
  ELFV_dehydrog  22 lkklkldslegkrvaisGsGnvgsyaallltelgakv.vavsDssGviy.dpeGldieellelkeerks.vkeykks...sekkaeyieneeelle 111
                    +k++    ++gk  ++ G+G+vg+ +al l+ +ga+v ++ +D   ++    +G+++ ++ + + + +  v++   +     k++e+++n++ + +
     KHJ32232.1 206 IKRATDVMIAGKIAVVAGFGDVGKGCALALQGMGARVlITEVDPINALQaAVSGFQVTTMEKAASQAQIfVTTTGCRdilVGKHFEVMPNDAIVCN 301
                    4443333699*************************984688898888863779******9999999999666666558886667899999877755 PP

                    S.....S-SEEEE CS
  ELFV_dehydrog 112 l.....kvdilvP 119
                    +     ++d++  
     KHJ32232.1 302 IghfdiEIDVAWL 314
                    4422226666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3252.88
//
Query:       KHJ32233.1  [L=417]
Description: putative l-2-hydroxyglutarate mitochondrial [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-53  181.7   0.0    3.4e-53  181.5   0.0    1.0  1  DAO            FAD dependent oxidoreductase
    0.00021   21.4   0.2    0.00045   20.4   0.2    1.6  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain
      0.005   16.1   0.2      0.015   14.6   0.1    1.7  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
     0.0061   15.2   0.2       0.28    9.7   0.0    2.3  2  Mqo            Malate:quinone oxidoreductase (Mqo)
  ------ inclusion threshold ------
      0.021   15.1   0.2      0.062   13.6   0.1    1.8  2  TrkA_N         TrkA-N domain
      0.044   13.1   0.9        6.9    5.9   0.0    2.1  2  FAD_oxidored   FAD dependent oxidoreductase
      0.061   13.9   0.1       0.16   12.5   0.1    1.7  1  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase
      0.083   12.2   0.0       0.14   11.4   0.0    1.3  1  AlaDh_PNT_C    Alanine dehydrogenase/PNT, C-terminal domain
        0.1   11.7   0.1        4.3    6.4   0.0    2.2  2  K_oxygenase    L-lysine 6-monooxygenase (NADPH-requiring)
       0.12   11.5   1.3        0.2   10.7   1.3    1.5  1  FAD_binding_2  FAD binding domain


Domain annotation for each model (and alignments):
>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.5   0.0   1.9e-56   3.4e-53       4     351 ..      37     406 ..      36     407 .. 0.87

  Alignments for each domain:
  == domain 1  score: 181.5 bits;  conditional E-value: 1.9e-56
                 EECTSHHHHHHHHHHHHTT...EEEEESSSSTTSSGGGSSEEEEESSSSTHHSTHHHHHHHHHHHHHHHHHHHHHSSTTSEEEEEEEEEESSHHHHHHH CS
         DAO   4 iiGGGiiGlstAyeLarrg...VtllekgdiagsgaSgrnsgllhsglrylpeaselarlslealeelreleeelgididyrrtGllslaadeeeleal 99 
                 +iG+G+iGl++A++La ++   ++l+e+++ +g+++S+rns ++h+gl+y  +   +  l+  + + l+ l++++   i++ +  + ++a++++++e+l
  KHJ32233.1  37 VIGAGVIGLAIARQLASHNkasTILVERNHAVGTETSSRNSEVIHAGLYYGTNS-LKTHLCITGKHKLYSLCSKYS--IPHAKVKKWIVAQTSQQREEL 132
                 9***************997799**************************977765.888***************998..89***********9999**** PP

                 HHHHHHH..HHTTTTEEEEEHHHHHHHSTTSTTTSEEEEETTEEEEEHHHHHHHHHHHHHHTT-EEEESECEEEEEE...EETCEEEEE.EECT.EEE. CS
         DAO 100 dkllall..leagldaelldaeevrelepalpgllgalfypdtgqvdpakltaalaraaealGveilegtevtglee...edgkvwgve.rttp.gen. 190
                 +kl +      +g+++e++++e++++ ep+++ ++g l + +tg++d ++++++l++++e++G++i + + vtg+e    ++  +w +  ++t+ ge  
  KHJ32233.1 133 EKLHKFStvI-NGAPTEFVSRERAQREEPHVQAIAGILESSTTGIIDSHAYMQFLLNDFEERGGNIALFSAVTGIESlgtRGSHGWAITvQDTRsGEYs 230
                 6655555954.999***************9767888888999*********************************875544477788889888889885 PP

                 E.EEEEEEE--GGGHHHH.HTT.CTT.TSEEEEEEEEEEEEEECCTHSTGSGCSEEEEEEEETTTTEEEEEETTSEEEEEESSEEETTCSSTSCSHHHH CS
         DAO 191 d.aadavVnaaGawsdll.gll.kel.dlpispvrgqvlvlkplseklvspaailpvpetdddgrgvyvtprkdgrvlvGgtadeesgdddpevdeedi 285
                 + + ++++naaG+ + ++ +++ ++  +++   ++g ++   + +     +++i+p pe+ ++g g+++t +  gr+++G++ ++ ++++++ v+  ++
  KHJ32233.1 231 TfTSETIINAAGLKACEIsNMIiPPNqHRKQFYAKGNYFSCTRYQSY--TRHLIYPAPEPGHGGLGTHLTIDMAGRMRFGPDVEWVESPNNLVVNISRL 327
                 354477*********97768888444345667789999999666664..367******************************999999*********** PP

                 HHHHHHHHHHSGGG..CGEEEEEEEEEE..ETTS..........SEEEEEEETEEEEEEEEECTTTHHHHHHHHHHHHHH CS
         DAO 286 dellealrklfPql..gdvlrkwaGlrp..lpdg..........lpligetpgvkglylatGhsghGltlapatGkllae 351
                  + +e+++ ++P l    +   +aG+rp  + ++          ++ i++++ v+g++ + G++++Glt+++a+++++ +
  KHJ32233.1 328 PQAIEQIKLFLPCLdaTTIIPGFAGIRPklT-SNaavgsgknfvDFHIQKETNVEGFVNLLGIESPGLTCSLAIAEMVDN 406
                 *************75466999*******642.22355567888888888855799*********************9865 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.2   2.5e-07   0.00045       1      40 [.      37      77 ..      37      94 .. 0.77

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 2.5e-07
                   EE--SHHHHHHHHHHHCCTE.EEEEE-SSSSSSGGG-EECE CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagf.dvlllekrdrlGGraasyev 40
                   ++GaG+ Gl++A+ La +++ +  l+e+++ +G   +s++ 
     KHJ32233.1 37 VIGAGVIGLAIARQLASHNKaSTILVERNHAVGTETSSRNS 77
                   8****************966266677777778877777654 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.1   8.3e-06     0.015     146     189 ..      36      80 ..      13      87 .. 0.74
   2 ?   -1.3   0.0      0.56     1e+03      80     109 ..     215     243 ..      90     263 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 8.3e-06
                  EEES-SHHHHHHHHHHHHHT-E.EEEEESSSSSSTTS-HHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 146 vvvGgGyiGvElAaalaklgke.vtlveardrllraldkelsaal 189
                   v+G+G+iG+ +A +la+ +k  + lve++  +  ++ ++ s+ +
   KHJ32233.1  36 QVIGAGVIGLAIARQLASHNKAsTILVERNHAVGTETSSRNSEVI 80 
                  49*****************88746677777666666666666655 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.56
                  ESCEEEEETEEECTCEEEEEESEEEE---E CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  80 pgkkkvklekkkegdeekiaydklvlAtGs 109
                  +g+  ++++++++g+  +++ ++++ A G 
   KHJ32233.1 215 HGW-AITVQDTRSGEYSTFTSETIINAAGL 243
                  444.45555555566666666666666664 PP

>> Mqo  Malate:quinone oxidoreductase (Mqo)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1     0.015        26       7      46 ..      37      75 ..      32      86 .. 0.82
   2 !    9.7   0.0   0.00016      0.28     194     279 ..     193     280 ..     156     309 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.015
         Mqo  7 liGaGimsatlgvllkelepelsievlerldkvaeessna 46
                +iGaG++  +++  l + +  +s  ++er ++v++e s+ 
  KHJ32233.1 37 VIGAGVIGLAIARQLASHNK-ASTILVERNHAVGTETSSR 75
                79**********99998665.555689*********9975 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00016
         Mqo 194 kgvelklkhev...kdlkreedgkWkvkvkdlktgekkkvkakfvfiGaGGgalklLqksgipeakgyggfPvsGqflvcknpevveqh 279
                 +g ++ l + v   ++l  + ++ W ++v+d+++ge ++++++ +   aG +a ++  +  ip +++   f   G+++ c++ +  ++h
  KHJ32233.1 193 RGGNIALFSAVtgiESLGTRGSHGWAITVQDTRSGEYSTFTSETIINAAGLKACEI-SNMIIPPNQHRKQFYAKGNYFSCTRYQSYTRH 280
                 445555555550005555677789*********************99999999987.567899999**************999888887 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   3.4e-05     0.062       3      47 ..      37      82 ..      36      86 .. 0.89
   2 ?   -3.1   0.0       4.9   8.8e+03      95     107 ..     122     134 ..     111     148 .. 0.47

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.4e-05
                EES-SHHHHHHHHHHHH.TTEEEEEEESSHHHHHHHHHTTSEEEES CS
      TrkA_N  3 iiGlGrvGrslaeeLse.ggkdvvvidkdeerveelreeglevvvg 47
                +iG+G +G ++a++L + ++ + +++++++++  e + ++ ev+++
  KHJ32233.1 37 VIGAGVIGLAIARQLAShNKASTILVERNHAVGTETSSRNSEVIHA 82
                8****************66677********9988888888888875 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 4.9
                 EESSGGGHHHHHH CS
      TrkA_N  95 raqdpehaellkk 107
                  aq++++ e l+k
  KHJ32233.1 122 VAQTSQQREELEK 134
                 3333333333333 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.2     0.004       7.2       4      40 ..      37      74 ..      36      93 .. 0.85
   2 ?    5.9   0.0    0.0038       6.9      45     144 ..     131     242 ..     119     244 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.004
  FAD_oxidored  4 VvGGgpaGvaAAia.AaraGakvlLveergvlGGllts 40
                  V+G+g+ G+a A + A  + a+++Lve++  +G  ++s
    KHJ32233.1 37 VIGAGVIGLAIARQlASHNKASTILVERNHAVGTETSS 74
                  99********99983556667**********9977666 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0038
  FAD_oxidored  45 tdignkaeeqvvtgiareflerlrqrgga.rlkkrskwn.......tfepevakavleemlaeagvtvllntrlvevekegkr...iesvtveske. 129
                    +++ ++ + v++g   ef++r r+++++ + ++ ++         + + +++ + l +  +e g ++ l + ++++e  g+r    +++tv++ + 
    KHJ32233.1 131 ELEKLHKFSTVINGAPTEFVSRERAQREEpHVQAIAG-IlessttgIIDSHAYMQFLLNDFEERGGNIALFSAVTGIESLGTRgshGWAITVQDTRs 226
                   44455544599************99555533332222.1234556699****9999999999*9**********9999865444459******9999 PP

  FAD_oxidored 130 g.rktirAkvfiDATg 144
                   g   t++++ +i A g
    KHJ32233.1 227 GeYSTFTSETIINAAG 242
                   8899********9976 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   8.9e-05      0.16       4      33 ..      37      66 ..      36      78 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 8.9e-05
                EECSSHHHHHHHHHHHHTTSEEEEEESSSS CS
   Pyr_redox  4 vvGgGyiglElAgalaelgkkVtvversdk 33
                v+G+G+igl  A  la ++k  t+++ +++
  KHJ32233.1 37 VIGAGVIGLAIARQLASHNKASTILVERNH 66
                9****************9986665555444 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   7.8e-05      0.14      26      78 ..      29     124 ..      13     146 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.8e-05
                  B---EE.EEESTSHHHHH.HHHHHHHTT-EEEEEESSHHHHHHHHHTTTCECEE.........................................H CS
  AlaDh_PNT_C  26 vepakv.lviGgGvaGlq.AiatakglgakVtvlDvrparleqleslgakfvev.........................................l 78 
                  v++a++  viG+Gv Gl+ A + a+  +a++ +++ ++a+  + +s +++++++                                         +
   KHJ32233.1  29 VTHAQTkQVIGAGVIGLAiARQLASHNKASTILVERNHAVGTETSSRNSEVIHAglyygtnslkthlcitgkhklyslcskysiphakvkkwivaQ 124
                  44554426*********83556899999****************9999998888777777777777776666666666666666666666665542 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.022        40       8      38 ..      38      67 ..      31      71 .. 0.89
   2 ?    6.4   0.0    0.0024       4.3     296     340 ..     199     243 ..     110     245 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.022
  K_oxygenase  8 iGiGpsnLsLailleevkkelkalflerqpe 38
                 iG+G+  L++a +l++++ + +++ +er+++
   KHJ32233.1 38 IGAGVIGLAIARQLASHN-KASTILVERNHA 67
                 9****************9.899999998765 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0024
  K_oxygenase 296 rllpnrevesaeaegkgeveltlrneesgeeetlevdavvlATGY 340
                   + + + +es+  +g++++ +t++++ sge +t ++++++ A G 
   KHJ32233.1 199 LFSAVTGIESLGTRGSHGWAITVQDTRSGEYSTFTSETIINAAGL 243
                  34455678888889999*************************996 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.3   0.00011       0.2       4      39 ..      37      73 ..      37     273 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00011
                   EE--SHHHHHHHHHHHHTTT.-EEEEESSSGGGSGGG CS
  FAD_binding_2  4 ViGsGlAGLaAAleaaeaGl.kvavvekeqefggata 39
                   ViG+G+ GLa A ++a +++ ++++ve  +++g +t 
     KHJ32233.1 37 VIGAGVIGLAIARQLASHNKaSTILVERNHAVGTETS 73
                   9****************9999*********9998543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      571  (0.0318478); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 3054.20
//
Query:       KHJ32234.1  [L=250]
Description: putative pyrimidine 5 -nucleotidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-07   31.1   0.0      3e-07   30.7   0.0    1.2  1  HAD_2       Haloacid dehalogenase-like hydrolase
    5.1e-06   26.9   0.0    7.5e-06   26.4   0.0    1.3  1  Hydrolase   haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
       0.03   14.2   0.0      0.051   13.4   0.0    1.4  1  Acid_PPase  Acid Phosphatase


Domain annotation for each model (and alignments):
>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.0     5e-11     3e-07      36     176 ..      75     214 ..      51     216 .. 0.83

  Alignments for each domain:
  == domain 1  score: 30.7 bits;  conditional E-value: 5e-11
       HAD_2  36 elrkliglslrellrklgeseeeeekieellrkyneekkk.kevkpydgvkelLeeLkeagyklgivTsksreaveekleqlgiesyFdvivtsedvek 133
                 e+ k +gl  + l+r+ +++     +++   +k+ + +     ++p + ++ lL +  ++++kl + T+   + +++  + l+++s+Fd     +  e 
  KHJ32234.1  75 EYYKTYGLAVEGLVRHHKIDPM---DFN---KKVDDALPLeSILSPNPKLQRLLGDFDKKKVKLWLFTNAYVNHAKRVTRILEVDSFFDGLTFCDYSEL 167
                 5567778888888888877544...333...44444333236799**************************************************9999 PP

       HAD_2 134 k...KPdpeviekaleklklkk.eeviyvGDsptDieaakkagikvi 176
                 k   KPd +++eka+ + +++k e++ +v Ds    + a ++g ++i
  KHJ32234.1 168 KlvcKPDIKSFEKAMSEAGISKfEDCYFVDDSELNCKRAEELGWTAI 214
                 999****************998466777***********99998877 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.0   1.3e-09   7.5e-06      68     200 ..      68     200 ..       7     210 .. 0.69

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 1.3e-09
                 HHHHTHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHH.TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTT.GGGESEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx RF
   Hydrolase  68 ayaigkpewltaldippdlgaaigsaqsqgrtvall.qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlG.ddyfdavi 164
                  + + ++e+ +        g a++ + +++++  ++ +++++  + ++  l++ p++  ++  + +++++++l t+   ++a+r+ + l  d +fd+  
  KHJ32234.1  68 DAYRLNREYYKTY------GLAVEGLVRHHKIDPMDfNKKVDDALPLESILSPNPKLQRLLGDFDKKKVKLWLFTNAYVNHAKRVTRILEvDSFFDGLT 160
                 2233333333333......4555555444444444478899999999999999*************************************999997777 PP

                 EHHCES...STTTSHHHHHHHHHHHT.STGGGEEEEESSH CS
                 xxxxxx...xxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx RF
   Hydrolase 165 asdiet...vakpspegkvaaireLq.gkpeevamVGDgv 200
                   d ++   v kp+ + +++a+ e +  k e++ +V+D+ 
  KHJ32234.1 161 FCDYSElklVCKPDIKSFEKAMSEAGiSKFEDCYFVDDSE 200
                 77777779******************7779********85 PP

>> Acid_PPase  Acid Phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   8.5e-06     0.051      76     152 ..     143     218 ..     102     233 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 8.5e-06
                 HHHHHHHTT-G..........GGESEEEESSS-HHHHHHHHHHHH--.-GGGEEEEES-HHHHHHHHTTT-EEEE-SS CS
  Acid_PPase  76 arelLklleindakekekklldvfddveiykgsktkhfeklkkktgi.eyedmlfFDdesrnievesrlgvtfvlvpd 152
                 a+++ + le++ +  ++ +  d+ ++++++ +  +k fek+  + gi ++ed  f Dd + n++  ++lg t ++ ++
  KHJ32234.1 143 AKRVTRILEVD-SFFDGLTFCDY-SELKLVCKPDIKSFEKAMSEAGIsKFEDCYFVDDSELNCKRAEELGWTAIHLKE 218
                 55555556665.44444444444.3456666778999**********99************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       488  (0.0272185); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2008.14
//
Query:       KHJ32235.1  [L=988]
Description: putative kh domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.2e-30  102.4   3.6    2.8e-06   27.0   0.1    7.2  7  KH_1      KH domain


Domain annotation for each model (and alignments):
>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0     0.049   8.8e+02      48      64 ..     239     255 ..     222     256 .. 0.88
   2 !   21.7   0.0   7.3e-09   0.00013      11      65 ..     277     342 ..     269     343 .. 0.88
   3 !   12.5   0.0   5.6e-06       0.1      21      54 ..     372     402 ..     359     409 .. 0.85
   4 !    6.5   0.0   0.00042       7.6      24      65 ..     447     480 ..     443     481 .. 0.74
   5 !   10.8   0.2   1.9e-05      0.34       3      37 ..     495     529 ..     493     538 .. 0.86
   6 !   27.0   0.1   1.6e-10   2.8e-06       2      43 ..     562     607 ..     561     622 .. 0.82
   7 !   16.2   0.0     4e-07    0.0071      20      63 ..     666     706 ..     649     709 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.049
                 EEEEESHHHHHHHHHHH CS
        KH_1  48 vtisGspeavekAkeli 64 
                 v i G++e+v++Ak ++
  KHJ32235.1 239 VAIYGDMESVDHAKTRV 255
                 7799*********9876 PP

  == domain 2  score: 21.7 bits;  conditional E-value: 7.3e-09
                 HHHHHTGGGHHHHHHHHHHT-EEEEESSTT..............T.-EEEEEE.SHHHHHHHHHHHH CS
        KH_1  11 vgriIGkgGsnIkeIreetgakIkvpksedeg...........sderevtisG.speavekAkelie 65 
                 +  i G+  ++Ik I++ t++ I +p+ + +             +++e+ i+G +p +++ Ak++i+
  KHJ32235.1 277 HTVICGRFRKHIKLIESTTNTAIYFPP-PFSHvyrycpagaqrRNPEEIFITGeTPLQIALAKQKIH 342
                 667889999********88*******5.4444579******************************97 PP

  == domain 3  score: 12.5 bits;  conditional E-value: 5.6e-06
                 HHHHHHHHH.T-EEEEES.STT...T.-EEEEEESH CS
        KH_1  21 nIkeIreet.gakIkvpk.sedegsderevtisGsp 54 
                 ++++I+e + g+ I++p   +    + ++++i+G++
  KHJ32235.1 372 KVRKIME-SnGTFIQFPAlAS----QRNMIRIQGTE 402
                 79*****.66*******6554....68*******76 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.00042
                 HHHHHHT-EEEEESSTT...T.-EEEEEESHHHHHHHHHHHH CS
        KH_1  24 eIreetgakIkvpksedegsderevtisGspeavekAkelie 65 
                 +I + + a + ++k         ++ti+Gs +av++A+  i+
  KHJ32235.1 447 DICANSDADVSFDK--------LTFTITGSDDAVKAALMVIS 480
                 56666666666653........279************99887 PP

  == domain 5  score: 10.8 bits;  conditional E-value: 1.9e-05
                 EEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEES CS
        KH_1   3 rilvPsslvgriIGkgGsnIkeIreetgakIkvpk 37 
                 +i++ +++  ++ Gk++ +I++I+ ++ ++I +++
  KHJ32235.1 495 KIELANEHKEFVSGKKNGKINKIMGQSSVQIIFDG 529
                 67778889999*************99******985 PP

  == domain 6  score: 27.0 bits;  conditional E-value: 1.6e-10
                 EEEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT........ CS
        KH_1   2 lrilvPsslvgriIGkgGsnIkeIreetgakIkvpksedeg.....s 43 
                 ++++vP +++ riIG gG++I++I+++  + +k+  + +++     +
  KHJ32235.1 562 ISFHVPDQYHKRIIGIGGQHIQQIMKKHSVFVKFS-NAMDRggagrE 607
                 6799**********************88******9.55544445542 PP

  == domain 7  score: 16.2 bits;  conditional E-value: 4e-07
                 HHHHHHHHHHT-EEEEES.STT...T.-EEEEEESHHHHHHHHHH CS
        KH_1  20 snIkeIreetgakIkvpk.sedegsderevtisGspeavekAkel 63 
                 s + e++++ ++kI++p+ +e     ++ v isG++ +v +++++
  KHJ32235.1 666 SQLSELEKKWNCKITFPStEE----ASDDVIISGPEWQVPQCVDE 706
                 67899***88*******7454....58*******88889999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (988 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       461  (0.0257125); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.39
# Mc/sec: 7579.76
//
Query:       KHJ32236.1  [L=739]
Description: putative phosphatidylinositol 4-kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-45  155.5   0.0    3.4e-45  154.8   0.0    1.4  1  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase


Domain annotation for each model (and alignments):
>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.8   0.0   1.9e-49   3.4e-45       1     249 [.     174     530 ..     174     531 .. 0.93

  Alignments for each domain:
  == domain 1  score: 154.8 bits;  conditional E-value: 1.9e-49
                     EEEEEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHHHHHHHHHCHCH CS
  PI3_PI4_kinase   1 gsagiykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekkgvpptasveslrvaldkk 95 
                     gs+g+y+++++ ++   iv+vfk++dee+++ +npk+ k+ +++ +++ +gr c+i++l + se+aa+ ld +l ++ vp t  v  ++  ++++
      KHJ32236.1 174 GSSGSYFARNSDGK---IVGVFKPKDEEPYAAGNPKWNKWIHRNLFPCFFGRACLIPNLSYVSEAAAYTLDCRLRTNLVPYTDIVHLSSKSFHYD 265
                     689***********...***********************************************************9888888888877888888 PP

                     CCHHHHHCCHHHHHHTSSTTHHHHHHHHHSSSHH........................................HHHHH.HHHHHHHHHHHHHHH CS
  PI3_PI4_kinase  96 klkkekklkfekrtalkpksgllqeFvkkspsae........................................ewlea.rkqFvrslaklsvld 149
                      + + +    + ++ ++pk+g++q F + +++a+                                         w++   ++F+++l+kl+vld
      KHJ32236.1 266 FWHRRNY--YKRKKRFPPKVGSFQVFLEGYKDANiflrehawpdhteseyrpvgapqkrtkdtetsgkrqnrrfFWTDNlQQSFREELEKLVVLD 358
                     8887777..55667799****************99*********************************999997343334799************ PP

                     HHHT-TT--TTTEEEE...TTTS.........................................................EEEESSTTTCC.... CS
  PI3_PI4_kinase 150 yilgngDRhldNilvd...ktsg.........................................................klihIDfGlil.... 180
                     yi++n+DR+ldN++++   k+++                                                         ++ +ID+ l+     
      KHJ32236.1 359 YIMRNTDRGLDNWMIKvdrKKEKnsnspeipiqvisnevgaspslessdgtsesgpyrqqkpmkvdstsstlknskatkiTIGAIDNSLSWpwkh 453
                     ***************65443333688*************************************************************9999**** PP

                     TCSHCSSSS.....-.SSS..SS.S-THHHHHHTSTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHH..HHHHHCCSSC CS
  PI3_PI4_kinase 181 pdewkllpf.....pqekv..Pf.rltrelvlaidpskdeglfresceealealrrdqnlltrllkk..avkdglilwe 249
                     pd+w+ +pf     p  ++  Pf + tr+++l++  +++ +++ e+ +e+++++++d ++  r+++   av++g+++++
      KHJ32236.1 454 PDAWRSFPFgwlflPVSLIgqPFsKKTRDHFLPL--LTSKQWWSETQMELRKVFSQDVDFKERMFARqiAVMKGQAWNV 530
                     **************7666677*************..*****************************9999******9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (739 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.24s 00:00:00.86 Elapsed: 00:00:00.40
# Mc/sec: 5480.35
//
Query:       KHJ32237.1  [L=753]
Description: hypothetical protein EV44_g2137 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (753 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       558  (0.0311228); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.40
# Mc/sec: 5676.68
//
Query:       KHJ32238.1  [L=197]
Description: hypothetical protein EV44_g2003 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1059  (0.0590663); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1561.94
//
Query:       KHJ32239.1  [L=168]
Description: hypothetical protein EV44_g4238 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.16   12.0   0.0        2.7    8.0   0.0    2.0  2  Lig_C     Ligase Pab1020 C-terminal region


Domain annotation for each model (and alignments):
>> Lig_C  Ligase Pab1020 C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0   0.00015       2.7      33      75 ..      16      58 ..      12      60 .. 0.92
   2 ?    1.8   0.0     0.013   2.3e+02      65     101 ..     103     139 ..      96     144 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00015
                HHHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEEEEE-SSHH CS
       Lig_C 33 eelrerakeLGesiLepmvetikkvkeeekvkeefrvrfkdee 75
                ee++  +  LG+ +L  m + + ++ ++ek++ ++ v +++ +
  KHJ32239.1 16 EEMELECPGLGTGFLALMSDGVSRAIRGEKIYTNIDVLLRNAS 58
                78899999****************************9998865 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.013
                 EEEEEE-SSHHHHHHHHHHHHCTT--EEEEEEE..TT CS
       Lig_C  65 eefrvrfkdeenieellehLrrlgvkaeveekekedg 101
                 +++ +r++  +++++ +++L r++++  +++++   +
  KHJ32239.1 103 RRIMIRLEHDHEAHKAESFLLRQQIQSLISDPSLVSD 139
                 678999******************9998888776555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1284.41
//
Query:       KHJ32240.1  [L=246]
Description: putative eukaryotic translation initiation factor 6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-80  269.5   0.6    1.2e-80  269.5   0.6    1.4  2  eIF-6     eIF-6 family


Domain annotation for each model (and alignments):
>> eIF-6  eIF-6 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  269.5   0.6   6.9e-85   1.2e-80       1     196 [.       4     203 ..       4     204 .. 0.98
   2 ?   -2.9   0.0       0.2   3.6e+03     157     183 ..     209     235 ..     206     238 .. 0.77

  Alignments for each domain:
  == domain 1  score: 269.5 bits;  conditional E-value: 6.9e-85
                 .E-BTTB--HHHH-EE-SSEEEE-TTS-HHHHHHHHHHHT..-EEEE--BTTBS-HHHH-EE-SSEEEEETT--HHHHHHHHHHHH..---EEE--SS- CS
       eIF-6   1 rlsiegsseiGvfarltnkyalvpegveeefvkaieeeLk..vevvettiagsrlvGslvvgNsngllvpstvtdeeleklkeslk..leverleeklt 95 
                 r+++e+s+eiGvf++ltn+yal+++g++e+f++++e+eL+  +++++t+iag+r++G+l++gN++gllvp t+td+el++l++sl+  ++++r+ee+l+
  KHJ32240.1   4 RTQFENSNEIGVFSTLTNSYALIAQGASENFYSVFEAELQdiIPICRTQIAGTRIIGRLTAGNRKGLLVPTTTTDQELQHLRNSLPdaVKIQRIEERLS 102
                 789**************************************99*******************************************55555******** PP

                 -HHHHEEE-SSEEEE-GGGGG.GHHHHHHHHTSEEEE--BTTBS-TTTSEEE-SSEEEE-TT--HHHHHHHHHHHT-SEEE--BTTTBS-GGGTEEE-S CS
       eIF-6  96 AlGNvilaNDkvAlvhpdlsketveiiadvLgvevvrgtiagiktvGsaavvtnkgllvhpkateeeleeleellkveveagTvNrGsklvgsglvaNd 194
                 AlGNvi+ ND+vAlvhpdl++et+eiiadvLgvev+r+tia++ +vGs+++++n+g++vhpk++ ++++el++ll+v++ ag++NrGs ++g+g+v+Nd
  KHJ32240.1 103 ALGNVIVSNDHVALVHPDLERETEEIIADVLGVEVFRQTIADNVLVGSYMTLSNQGGMVHPKTSIQDQDELSSLLQVPLVAGSINRGSAVIGAGMVVND 201
                 *************************************************************************************************** PP

                 S- CS
       eIF-6 195 kg 196
                 ++
  KHJ32240.1 202 WM 203
                 97 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.2
                 T--HHHHHHHHHHHT-SEEE--BTTTB CS
       eIF-6 157 kateeeleeleellkveveagTvNrGs 183
                 ++t +el+ +e+++++    +++  Gs
  KHJ32240.1 209 DTTATELSVVENVFRLGEGRASMAIGS 235
                 678889999999998877777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       457  (0.0254894); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1723.80
//
Query:       KHJ32241.1  [L=380]
Description: putative uv excision repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.9e-24   84.1   9.6    6.4e-24   83.4   9.6    1.4  1  XPC-binding  XPC-binding domain
    5.3e-22   77.3   6.6    8.7e-12   44.7   0.2    2.5  2  UBA          UBA/TS-N domain
    4.4e-19   68.0   0.1    7.8e-19   67.2   0.1    1.4  1  ubiquitin    Ubiquitin family
    1.6e-06   27.8   0.1    2.8e-06   27.1   0.1    1.3  1  Rad60-SLD    Ubiquitin-2 like Rad60 SUMO-like
     0.0092   16.1   0.0      0.019   15.1   0.0    1.5  1  Rad60-SLD_2  Ubiquitin-2 like Rad60 SUMO-like
  ------ inclusion threshold ------
      0.052   13.9   0.0       0.12   12.8   0.0    1.5  1  Ubiquitin_5  Ubiquitin-like domain
        0.1   13.1   0.0       0.26   11.9   0.0    1.7  1  DUF2407      DUF2407 ubiquitin-like domain


Domain annotation for each model (and alignments):
>> XPC-binding  XPC-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.4   9.6   2.5e-27   6.4e-24       1      56 [.     262     317 ..     262     318 .. 0.98

  Alignments for each domain:
  == domain 1  score: 83.4 bits;  conditional E-value: 2.5e-27
  XPC-binding   1 LefLrnnpqFqqlRqlvqqnPqlLqplLqqlaqsnPqllqlIqqnqeeFlqlLnep 56 
                  L+fLrnnpqFqqlRq+vqq+P++L+p+Lqq+++ nPql+ lI +++++Fl+lL+e+
   KHJ32241.1 262 LDFLRNNPQFQQLRQVVQQQPHMLEPILQQVGAGNPQLAALIGDHSQQFLRLLSEG 317
                  89****************************************************97 PP

>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   2.1     5e-12   1.3e-08       2      37 .]     149     184 ..     148     184 .. 0.97
   2 !   44.7   0.2   3.4e-15   8.7e-12       4      37 .]     339     372 ..     337     372 .. 0.96

  Alignments for each domain:
  == domain 1  score: 34.6 bits;  conditional E-value: 5e-12
                 CHHHHHHHHHTTS-HHHHHHHHHHTTTSHHHHHHHH CS
         UBA   2 deeaiqrLveMGFdreevveALratgnNeErAveyL 37 
                  e++i++L  MGF+r++++ A ra+++N ErAveyL
  KHJ32241.1 149 REAQIAELEIMGFERSQIEAAMRAAFYNSERAVEYL 184
                 699********************************9 PP

  == domain 2  score: 44.7 bits;  conditional E-value: 3.4e-15
                 HHHHHHHHTTS-HHHHHHHHHHTTTSHHHHHHHH CS
         UBA   4 eaiqrLveMGFdreevveALratgnNeErAveyL 37 
                 +ai+rL+ +GF+r+ + +A++a+++NeE+A+++L
  KHJ32241.1 339 AAIERLCHLGFSRDLATQAYFACDKNEELAANFL 372
                 79*******************************9 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.2   0.1     3e-22   7.8e-19       6      71 ..       8      73 ..       2      74 .. 0.95

  Alignments for each domain:
  == domain 1  score: 67.2 bits;  conditional E-value: 3e-22
                TTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEESS CS
   ubiquitin  6 ldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlrl 71
                l+++k+ +e e+sd ++e+K++ia+++g  a+ q+LiysGk+L+d +t+e+y+i+++ +++++ ++
  KHJ32241.1  8 LKQNKFIIEAEPSDLISEVKQRIADEKGWDASTQKLIYSGKILQDANTVESYKIEEKGFIVCMTTK 73
                799************************************************************876 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.1   1.1e-09   2.8e-06       2      66 ..       2      65 ..       1      69 [. 0.91

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 1.1e-09
                EEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTE CS
   Rad60-SLD  2 kiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgd 66
                k+  ++ +++++ i+ +p+  +s+++++ +++kg ++ ++++Li+ G+ L++ +tve+++ie++ 
  KHJ32241.1  2 KLSFRDLKQNKFIIEAEPSDLISEVKQRIADEKGWDA-STQKLIYSGKILQDANTVESYKIEEKG 65
                6666777888999************************.************************975 PP

>> Rad60-SLD_2  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   7.3e-06     0.019      48      74 ..      38      64 ..      10      96 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 7.3e-06
                 CCCEEEEETTEEE-TTSBCCCCS-TTT CS
  Rad60-SLD_2 48 vndlklilaGkiLennktlkelrlplg 74
                 +   kli++GkiL+++ t++++++   
   KHJ32241.1 38 ASTQKLIYSGKILQDANTVESYKIEEK 64
                 45569****************987544 PP

>> Ubiquitin_5  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   4.5e-05      0.12      42      84 ..      21      63 ..       4      74 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.5e-05
  Ubiquitin_5 42 vtgkelvskiaeefglkensiKlilngklleldktLeeQgvkn 84
                    +e+ ++ia+e g   ++ Kli++gk+l+  +t e   +++
   KHJ32241.1 21 DLISEVKQRIADEKGWDASTQKLIYSGKILQDANTVESYKIEE 63
                 5568999**************************9999877766 PP

>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0    0.0001      0.26      27      70 ..      24      65 ..       6     114 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.0001
     DUF2407 27 agLkqliRerlpaelasrrLrLIyaGrlLedttslasslklpee 70
                +++kq i ++     + +  +LIy+G++L+d+ +++s   +++ 
  KHJ32241.1 24 SEVKQRIADEK--GWDASTQKLIYSGKILQDANTVESYKIEEKG 65
                44555555554..556666799************9987666543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       819  (0.0456802); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2876.06
//
Query:       KHJ32242.1  [L=190]
Description: hypothetical protein EV44_g3193 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00049   20.6   0.0     0.0011   19.5   0.0    1.6  1  gag-asp_proteas  gag-polyprotein putative aspartyl protease
    0.00056   20.5   0.0     0.0013   19.4   0.0    1.6  2  Asp_protease_2   Aspartyl protease
  ------ inclusion threshold ------
      0.048   13.6   0.0      0.086   12.8   0.0    1.4  1  DUF1622          Protein of unknown function (DUF1622)
       0.05   13.4   0.0      0.072   12.9   0.0    1.3  1  RVP_2            Retroviral aspartyl protease


Domain annotation for each model (and alignments):
>> gag-asp_proteas  gag-polyprotein putative aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   2.5e-07    0.0011       3      57 ..     125     180 ..     123     187 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 2.5e-07
                      EEETTE.EEEEEEETT-SS-EEEHHHHHHTTGGGGEB..TT--EE-TTSTT-EEEE CS
  gag-asp_proteas   3 vkingk.pvkflvDTGAsstiiseelaerlglsrkedkgkvevktangeveakrvr 57 
                      + +n   + +++vD+GA+s ++  e+ ++ +l++k+++++  ++ ++g+++++ + 
       KHJ32242.1 125 CLVNASiSATAMVDSGATSFFVDLEFLRQNNLNPKKKTKPEVFTVVDGRESVGGAI 180
                      6677776899**************************************99876554 PP

>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.4   1.1e+04      42      59 ..      37      54 ..      21      59 .. 0.53
   2 !   19.4   0.0   2.8e-07    0.0013       9      53 ..     132     176 ..     123     185 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.4
  Asp_protease_2 42 vrvsgaggevkarlvrld 59
                    +  s++ g ++  +vr++
      KHJ32242.1 37 KNKSTLVGPSSIPKVRFP 54
                    334555555555555555 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 2.8e-07
  Asp_protease_2   9 pvrfllDTGasttlispelaeklglkvreseltvrvsgaggevka 53 
                      +++++D+Ga++ +++ e+ ++ +l++++++ + ++++++g+ ++
      KHJ32242.1 132 SATAMVDSGATSFFVDLEFLRQNNLNPKKKTKPEVFTVVDGRESV 176
                     6899*************************************9665 PP

>> DUF1622  Protein of unknown function (DUF1622)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.9e-05     0.086      13      51 ..      99     137 ..      93     146 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.9e-05
     DUF1622  13 elrkkaaeayeeiRleLgrsllLgLeflvaadIlkTvva 51 
                 +++++++ a++++R++Lg++ +L L  lv a+I +T+++
  KHJ32242.1  99 QFSRDNDVAIHSLRTNLGNKSSLVLSCLVNASISATAMV 137
                 4555568999*************************9987 PP

>> RVP_2  Retroviral aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.6e-05     0.072      19      60 ..     119     160 ..     102     175 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.6e-05
       RVP_2  19 pdvvlgtflvnsipatvLfdsGasHsFiskafvsklklkvea 60 
                  ++vl+ ++  si at + dsGa+  F+  +f ++++l+ ++
  KHJ32242.1 119 SSLVLSCLVNASISATAMVDSGATSFFVDLEFLRQNNLNPKK 160
                 56677666666899*********************9998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1530.10
//
Query:       KHJ32243.1  [L=337]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       778  (0.0433934); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2352.76
//
Query:       KHJ32244.1  [L=300]
Description: putative homocitrate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-07   29.4   2.5    6.6e-07   29.4   2.5    4.2  4  Cir_N     N-terminal domain of CBF1 interacting co-repressor 


Domain annotation for each model (and alignments):
>> Cir_N  N-terminal domain of CBF1 interacting co-repressor CIR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   2.5   3.7e-11   6.6e-07       1      37 []      10      46 ..      10      46 .. 0.96
   2 ?   -2.3   0.4      0.29   5.2e+03      22      33 ..      82      93 ..      78      97 .. 0.63
   3 ?   -0.8   3.3     0.099   1.8e+03      15      28 ..     140     153 ..     135     154 .. 0.85
   4 ?    0.4   4.4     0.044     8e+02      12      31 ..     227     246 ..     226     248 .. 0.67

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 3.7e-11
                SS-TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Cir_N  1 SWHPgllkNqerVWkaEqkaleEkkkieerkkeieeE 37
                SW++ +++N+ +V+ +E+ a++ ++ +eer++ ++ E
  KHJ32244.1 10 SWNVYNKANIDKVRQDEAIAKAAEEAEEERMQALDAE 46
                9******************************998877 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.29
                HHHHHHHHHHHH CS
       Cir_N 22 eEkkkieerkke 33
                ++++k+++++ e
  KHJ32244.1 82 HRERKLRKKANE 93
                566666666655 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.099
                 HHHHHHHHHHHHHH CS
       Cir_N  15 kaEqkaleEkkkie 28 
                 +aE +ale++++ e
  KHJ32244.1 140 EAEREALEKQREFE 153
                 79999999999876 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.044
                 HHHHHHHHHHHHHHHHHHHH CS
       Cir_N  12 rVWkaEqkaleEkkkieerk 31 
                 +V++ E ++++ + ++++rk
  KHJ32244.1 227 KVRELEREKKKMRGREKQRK 246
                 66777777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1574  (0.0877907); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2239.72
//
Query:       KHJ32245.1  [L=799]
Description: putative vesicular-fusion protein sec18 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.3e-54  181.4   0.0    1.4e-38  132.3   0.0    2.4  2  AAA              ATPase family associated with various cellul
      1e-10   42.3   0.2    0.00062   20.2   0.0    2.9  2  AAA_16           AAA ATPase domain
    1.3e-10   41.0   0.0    2.4e-05   23.7   0.0    2.3  2  TIP49            TIP49 P-loop domain
    1.6e-10   41.4   1.8    0.00024   21.4   0.0    4.5  5  AAA_22           AAA domain
    3.6e-10   39.5   2.0      9e-09   35.0   0.1    2.9  2  CDC48_2          Cell division protein 48 (CDC48), domain 2
    2.4e-09   37.2   0.4    0.00053   19.8   0.0    3.4  3  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    3.5e-09   36.3   0.0    7.1e-09   35.3   0.0    1.6  1  AAA_lid_3        AAA+ lid domain
    1.1e-08   35.2   0.2     0.0019   18.2   0.0    2.8  2  AAA_5            AAA domain (dynein-related subfamily)
      2e-08   34.8   0.0     0.0089   16.6   0.0    3.2  3  AAA_18           AAA domain
    4.9e-08   33.1   0.0     0.0015   18.5   0.0    2.6  2  AAA_14           AAA domain
    6.4e-08   32.9   0.0     0.0023   18.1   0.0    2.4  2  AAA_33           AAA domain
    8.3e-08   32.5   0.0    4.6e-05   23.6   0.0    2.7  2  AAA_2            AAA domain (Cdc48 subfamily)
      3e-07   30.8   0.0      0.034   14.5   0.0    2.8  2  RNA_helicase     RNA helicase
    3.2e-07   29.9   0.1     0.0054   16.1   0.0    2.3  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    1.1e-06   28.6   0.0      0.011   15.4   0.0    2.5  2  AAA_24           AAA domain
    3.2e-06   26.5   0.2     0.0063   15.7   0.0    2.3  2  NB-ARC           NB-ARC domain
    1.7e-05   25.2   0.0      0.011   16.2   0.0    2.7  2  AAA_17           AAA domain
    1.9e-05   24.7   0.9      0.017   15.1   0.0    3.0  2  NACHT            NACHT domain
    2.4e-05   24.3   0.0       0.23   11.5   0.0    2.5  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
    3.1e-05   23.6   0.4      0.018   14.5   0.0    2.7  2  AAA_7            P-loop containing dynein motor region
    3.1e-05   23.8   0.0      0.093   12.5   0.0    2.5  2  IstB_IS21        IstB-like ATP binding protein
    3.8e-05   24.0   0.0       0.42   10.9   0.0    2.6  2  AAA_28           AAA domain
    5.1e-05   23.3   0.8         11    5.8   0.0    4.3  4  ATPase_2         ATPase domain predominantly from Archaea
    9.8e-05   22.1   0.0       0.57    9.9   0.0    2.5  2  Sigma54_activat  Sigma-54 interaction domain
    0.00014   21.3   0.2      0.026   13.9   0.2    2.5  2  ATPase           KaiC
    0.00016   21.5   0.1       0.39   10.5   0.0    2.4  2  AAA_11           AAA domain
    0.00059   19.0   0.0       0.41    9.7   0.0    2.2  2  Parvo_NS1        Parvovirus non-structural protein NS1
    0.00079   19.0   0.4        1.7    8.2   0.0    3.0  2  AAA_25           AAA domain
    0.00096   19.7   2.8      0.052   14.1   0.1    2.7  2  ABC_tran         ABC transporter
    0.00099   18.9   0.0       0.61    9.8   0.0    2.4  2  AAA_30           AAA domain
     0.0012   19.2   0.2       0.68   10.3   0.0    3.0  2  AAA_19           AAA domain
     0.0014   17.9   0.0       0.93    8.7   0.0    2.4  2  DUF2075          Uncharacterized conserved protein (DUF2075)
     0.0015   17.9   0.4        2.9    7.2   0.0    3.3  4  TniB             Bacterial TniB protein
     0.0022   17.9   0.0       0.68    9.8   0.0    2.4  2  AAA_3            ATPase family associated with various cellul
     0.0024   17.9   0.1        2.1    8.3   0.0    3.1  2  ResIII           Type III restriction enzyme, res subunit
     0.0036   16.8   0.0        1.9    7.9   0.0    2.4  2  PhoH             PhoH-like protein
     0.0037   17.2   0.1          4    7.3   0.0    2.8  2  NTPase_1         NTPase
     0.0037   16.6   0.0       0.35   10.1   0.0    2.3  2  Zeta_toxin       Zeta toxin
     0.0083   16.1   0.0        7.2    6.5   0.0    2.9  2  Rad17            Rad17 P-loop domain
  ------ inclusion threshold ------
       0.01   15.2   0.0       0.11   11.8   0.0    2.2  2  IPT              Isopentenyl transferase
      0.017   14.6   0.1        2.4    7.6   0.0    2.5  2  KTI12            Chromatin associated protein KTI12
      0.044   14.1   0.2       0.46   10.7   0.1    2.2  2  Hydin_ADK        Hydin Adenylate kinase-like domain
      0.051   13.3   0.0       0.55    9.9   0.0    2.2  2  Viral_helicase1  Viral (Superfamily 1) RNA helicase
      0.067   12.9   0.0        5.3    6.7   0.0    2.3  2  Cytidylate_kin   Cytidylate kinase
      0.069   12.8   0.2        3.5    7.2   0.0    2.5  2  SRP54            SRP54-type protein, GTPase domain
      0.079   13.1   0.0         27    4.9   0.0    2.9  3  Sigma54_activ_2  Sigma-54 interaction domain
      0.089   12.0   0.3        2.1    7.5   0.0    2.6  3  KAP_NTPase       KAP family P-loop domain
      0.092   12.3   0.5        4.9    6.7   0.0    2.7  3  cobW             CobW/HypB/UreG, nucleotide-binding domain
      0.094   12.7   0.0       0.36   10.9   0.0    2.0  1  Vps4_C           Vps4 C terminal oligomerisation domain
       0.11   11.6   0.1        6.5    5.8   0.0    2.5  2  DAP3             Mitochondrial ribosomal death-associated pro
       0.15   11.8   0.2         14    5.6   0.0    2.5  2  AAA_29           P-loop containing region of AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.3   0.0     4e-41   1.4e-38       1     131 [.     310     451 ..     310     452 .. 0.94
   2 !   46.9   0.0     1e-14   3.5e-12       1     120 [.     592     710 ..     592     722 .. 0.78

  Alignments for each domain:
  == domain 1  score: 132.3 bits;  conditional E-value: 4e-41
                 EEEESSTTSSHHHHHHHHHHHHT.HEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS.......TSEEEEEETGGGHHHHH...TTCCCHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelg.vefleisgsellskyvgesekkirelfkeakeka.......kpsilfiDEidalaksr...sgseseeeervvnq 88 
                 +llyGppGtGKTl+a+++ k l+ +e   i+g+e+l+kyvg+se++ir+lf++a+++        + +i+++DE+da++k+r    g+ ++++++vvnq
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNsREPKVINGPEVLNKYVGQSEENIRKLFADAEKEYkekgdesGLHIIIFDELDAVCKQRgsgAGGGTGVGDSVVNQ 408
                 69********************75778***************************7766788899777****************888889********** PP

                 HHHHHHHTTTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  89 Llteldgvkkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 Ll++ldgv++  +++++ig+tnr d++d+allr gR+++++ei+
  KHJ32245.1 409 LLSKLDGVDQL-NNILLIGMTNRKDMIDDALLRpGRLEVHMEIS 451
                 **********7.66***************************997 PP

  == domain 2  score: 46.9 bits;  conditional E-value: 1e-14
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHH..HHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgese..kkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvk 97 
                 vll+GppG GKT+la  +ak++g++f+++  +e +   + e++  + ++++f++a ++  + i++iD+i+++++       ++ + v+++L+  l ++ 
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAKDSGFPFIKLVSAENM-VGFNEMSkiQYLNKVFTDAYKSP-HNIVIIDNIERIIEWV-PIGPRFLNPVLQALMVLLTKQP 687
                 79************************998888777.33444331156778888877664.6***********9988.6678899999999999999999 PP

                 TSSSTEEEEEEESSGGGSTHHHH CS
         AAA  98 kkeskvivigatnrpdkldpall 120
                    ++++++g+t + + l +  l
  KHJ32245.1 688 PAPRRILILGTTSQRSVLRQLDL 710
                 99998999999988766665544 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   5.1e-06    0.0018      25      69 ..     308     348 ..     298     425 .. 0.72
   2 !   20.2   0.0   1.8e-06   0.00062      21      46 ..     586     611 ..     575     644 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 5.1e-06
      AAA_16  25 elvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipy 69 
                   +ll+G++G+GK+ ++r++ + l+ ++  +++g  + +     y
  KHJ32245.1 308 KGILLYGPPGTGKTLIARQIGKMLNSREPKVINGPEVLN----KY 348
                 679******************999999999999988888....33 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 1.8e-06
      AAA_16  21 sgrpelvllsGesGvGKsslvrellr 46 
                   +  +vll+G++G+GK++l+ ++++
  KHJ32245.1 586 NTTLLSVLLHGPPGSGKTALAAKIAK 611
                 333399***************99986 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   3.5e-05     0.012      51      97 ..     308     353 ..     297     371 .. 0.84
   2 !   23.7   0.0   6.7e-08   2.4e-05      38     103 ..     576     642 ..     572     652 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 3.5e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkkte 97 
                 +++Ll Gp+gtGkt +a  i k l++  p  +++g ev    v ++e
  KHJ32245.1 308 KGILLYGPPGTGKTLIARQIGKMLNSREPK-VINGPEVLNKYVGQSE 353
                 89***********************88885.6899999988887776 PP

  == domain 2  score: 23.7 bits;  conditional E-value: 6.7e-08
                 XXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXX CS
       TIP49  38 vivelikek.klaGravLlaGpsgtGktalaiaiskelgedvpfvalsgse..vyslevkktevltqal 103
                 ++v+l+k+  + +  +vLl Gp+g+Gktala  i+k+ g   pf++l+++e  v  +e++k   l + +
  KHJ32245.1 576 LFVDLVKNSpNTTLLSVLLHGPPGSGKTALAAKIAKDSG--FPFIKLVSAEnmVGFNEMSKIQYLNKVF 642
                 6788998763555679********************987..9****99887445568999999998877 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0   6.7e-07   0.00024       8      70 ..     310     373 ..     305     393 .. 0.83
   2 ?    2.3   0.0      0.55   1.9e+02      76     135 ..     357     432 ..     350     434 .. 0.69
   3 !   12.1   0.0    0.0005      0.18       7      27 ..     591     611 ..     587     618 .. 0.89
   4 ?    1.6   0.0      0.88   3.1e+02      84     106 ..     644     673 ..     630     705 .. 0.62
   5 ?    0.5   0.1       1.9   6.6e+02      90     124 ..     727     762 ..     670     776 .. 0.69

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 6.7e-07
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaee...erpevv.fvtlpsstsskdllrellralglelka 70 
                 ++++G++GtGKT+ +r++ + l+ ++       ++pev+ ++  +s+++ ++l+ +  +++++++++
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNSRE---PkviNGPEVLnKYVGQSEENIRKLFADAEKEYKEKGDE 373
                 799*******************7654...2446999999999999999**********999998877 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.55
      AAA_22  76 eellealeqalrarav...ielliiDEaqhlr....s.........eealeeLrsllnlsrkgvqliLvGtpelrk 135
                 + l++  e+  +++++    +++i DE + +     s         + ++++L s l+  +++  ++L+G+++  +
  KHJ32245.1 357 RKLFADAEKEYKEKGDesgLHIIIFDELDAVCkqrgSgagggtgvgDSVVNQLLSKLDGVDQLNNILLIGMTNRKD 432
                 445555555555555588889*********8777552667778888888888866666577788899999987666 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 0.0005
      AAA_22   7 ilvvtGesGtGKTtllrrlle 27 
                 +++++G++G+GKT l++++++
  KHJ32245.1 591 SVLLHGPPGSGKTALAAKIAK 611
                 679*************99875 PP

  == domain 4  score: 1.6 bits;  conditional E-value: 0.88
      AAA_22  84 qalrarav..ielliiDEaqhlr...s......e 106
                 +a     +  + ++iiD++++++   +      +
  KHJ32245.1 644 DAY----KspHNIVIIDNIERIIewvPigprflN 673
                 333....24556*********8655513433443 PP

  == domain 5  score: 0.5 bits;  conditional E-value: 1.9
      AAA_22  90 avielliiDEaqhlr.s...eealeeLrsllnlsrkgvq 124
                 +   + i+ E+q ++        l++Lr++ +  +++v 
  KHJ32245.1 727 KE-LASILREVQAFNnDndlVSSLNTLRDITD--TDQVG 762
                 33.66677788998762467889999999999..55544 PP

>> CDC48_2  Cell division protein 48 (CDC48), domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.1   2.6e-11     9e-09       1      46 [.     165     220 ..     165     238 .. 0.82
   2 ?    3.1   0.0      0.24        83       2      22 ..     277     297 ..     276     297 .. 0.88

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 2.6e-11
                 ..SCCCCH.HHHCCCTTEEE-TTEEEEECCTCCCEEEEEEEECCCC.........S CS
     CDC48_2   1 ridgdema.ylkrqFlgrpvtkGdlvvfefkgqeiklvVvstePkg.........p 46 
                 ++d+d +a  +++qF+++++++ +++ +++k++++ +vV++++ ++         +
  KHJ32245.1 165 PFDQDILAdIFIKQFENQIFAPSQRLLMDYKNMPLIFVVKTVQLVDlsmeknsetT 220
                 79****************************************99986655555543 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.24
                 .SCCCCHHHHCCCTTEEE-TT CS
     CDC48_2   2 idgdemaylkrqFlgrpvtkG 22 
                 +d+++ a ++r+F +r++ +G
  KHJ32245.1 277 LDTEFGAIFRRAFASRIFPPG 297
                 6889889**********9776 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.1   0.00015     0.053      33      67 ..     307     342 ..     301     348 .. 0.78
   2 ?   -1.4   0.0       4.8   1.7e+03       3      32 ..     342     370 ..     339     377 .. 0.72
   3 !   19.8   0.0   1.5e-06   0.00053      30      97 ..     586     662 ..     567     667 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.00015
      RuvB_N  33 ldhvllyGpPGlGkttlakiiakelgvk.lkitsgP 67 
                 +  +llyGpPG Gkt +a+ i k l+++  k+  gP
  KHJ32245.1 307 VKGILLYGPPGTGKTLIARQIGKMLNSRePKVINGP 342
                 4568*****************999986414666666 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 4.8
      RuvB_N   3 Pksleeyigqekvkeklkifieaakkreea 32 
                 P+ l++y+gq++ +   k+f +a k+ +e+
  KHJ32245.1 342 PEVLNKYVGQSEEN-IRKLFADAEKEYKEK 370
                 899*******8743.335666666666655 PP

  == domain 3  score: 19.8 bits;  conditional E-value: 1.5e-06
      RuvB_N  30 eealdhvllyGpPGlGkttlakiiakelgvk.lkitsgPvl......ekagdlaalltnl..eekdvlfideihrls 97 
                 +++l  vll+GpPG Gkt+la+ iak+ g   +k  s+  +      +k + l  ++t+   ++++++ id+i r+ 
  KHJ32245.1 586 NTTLLSVLLHGPPGSGKTALAAKIAKDSGFPfIKLVSAENMvgfnemSKIQYLNKVFTDAykSPHNIVIIDNIERII 662
                 567788*********************99863677777655111111444455555555422467888888888875 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0     2e-11   7.1e-09       1      36 [.     478     513 ..     478     536 .. 0.76

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 2e-11
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgik 36 
                 dv+l eLA++T+++SGA++  l++ A+  A  r  k
  KHJ32245.1 478 DVNLTELAQLTKNFSGAEIGGLVKSASSFAFNRHVK 513
                 9******************************99544 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   5.3e-06    0.0019       2      28 ..     310     337 ..     309     349 .. 0.82
   2 !   14.1   0.0    0.0001     0.036       1      27 [.     591     617 ..     591     664 .. 0.66

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 5.3e-06
                 EEEE--SSSSHHHHHHHGGGGB.S--EE CS
       AAA_5   2 vlLvGppGtgKselaerlaaal.nreve 28 
                 +lL GppGtgK+ +a+++ ++l  re  
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLnSREPK 337
                 89********************555555 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 0.0001
                 EEEEE--SSSSHHHHHHHGGGGBS--E CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnrev 27 
                 +vlL GppG+gK+ la ++a+  + ++
  KHJ32245.1 591 SVLLHGPPGSGKTALAAKIAKDSGFPF 617
                 59****************998666654 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   2.5e-05    0.0089       1      25 [.     310     353 ..     310     386 .. 0.73
   2 ?   -0.3   0.0       4.3   1.5e+03       5      44 ..     397     446 ..     396     496 .. 0.68
   3 !   14.0   0.0   0.00016     0.056       1      38 [.     592     627 ..     592     665 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 2.5e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf...................g 25 
                 Ill G+pG+GKt +a+ + k+l++                    
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNSrepkvingpevlnkyvgqsE 353
                 99*******************97778865555444444433333 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 4.3
      AAA_18   5 GtpGvGKttlakeLskrlgf..........gvnlrdvakenglllevdpe 44 
                 G  GvG + + + Lsk+ g+           +n +d++ +  l+ ++ + 
  KHJ32245.1 397 GGTGVGDSVVNQLLSKLDGVdqlnnilligMTNRKDMIDDALLRPGRLEV 446
                 55799999999999998666666667888877777777777776666655 PP

  == domain 3  score: 14.0 bits;  conditional E-value: 0.00016
      AAA_18   1 IlltGtpGvGKttlakeLskrlgfgvnlrdvakengll 38 
                 +ll G+pG+GKt la  ++k    g+  +++++ ++++
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAKDS--GFPFIKLVSAENMV 627
                 7899***************998..55555555555444 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   0.00057       0.2       5      76 ..     310     387 ..     307     421 .. 0.74
   2 !   18.5   0.0   4.4e-06    0.0015       5      88 ..     592     673 ..     590     685 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00057
      AAA_14   5 lvitGaRrvGKTtllkqlikell......vkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 +++ G+  +GKT +++q+ k l       ++  ++l   + + ++  ++ +++ +++++ek  e++ +++++DE   v
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNsrepkvINGPEVLNKYVGQSEENIRKLFADAEKEYKEKGDESGLHIIIFDELDAV 387
                 7899**************988886555554444443333333333333345577888888844469999*****8765 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 4.4e-06
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderd....kkladpekllelileklkeekktylflDEiqevpewekalkslvd 88 
                 +++ G+  +GKT l+ +++k++      + +i+l + ++     ++++ + l++++ + +k+  ++++++D i ++ ew  +  ++++
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAKDSG-----FPFIKLVSAENmvgfNEMSKIQYLNKVFTDAYKS-PHNIVIIDNIERIIEWVPIGPRFLN 673
                 6899***************9988.....6666666666633333333333455666665544.8999************987666655 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0    0.0004      0.14       2      48 ..     310     359 ..     310     382 .. 0.81
   2 !   18.1   0.0   6.7e-06    0.0023       2      56 ..     592     646 ..     592     662 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.0004
      AAA_33   2 vllvGlpGsGKstlaerllkklg...avllssdtlrrrlfgtdqqsktdy 48 
                 +ll G+pG+GK+  a+++ k l      +++ ++++++++g+ +++++++
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNsrePKVINGPEVLNKYVGQSEENIRKL 359
                 6789*************988777778999999999999998766665544 PP

  == domain 2  score: 18.1 bits;  conditional E-value: 6.7e-06
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdtlrrrlfgtdqqsktdytrvldrly 56 
                 vll+G+pGsGK+ la +++k  g+ ++   ++ +++  ++  +++++++v +++y
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAKDSGFPFIKLVSAENMVGFNEMSKIQYLNKVFTDAY 646
                 799********************66665555444444455555555555555555 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   1.3e-07   4.6e-05       5     105 ..     309     415 ..     305     421 .. 0.71
   2 ?    6.1   0.0     0.032        11       4      80 ..     590     661 ..     587     666 .. 0.59

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 1.3e-07
                 -EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG---..----THHHHHHHHHTTT-HHHHTTS......EEEEETGGG----...--------- CS
       AAA_2   5 silllgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegG......ivllDEidKihpk...essgadvSr 92 
                  ill gp g+Gkt++a+++ ++l+   +++  +++  e+l     ++e+ + +l    ++ ++++e+G      i+ +DE+d ++++   +  g    +
  KHJ32245.1 309 GILLYGPPGTGKTLIARQIGKMLN---SREPKVINGPEVLNkyVGQSEENIRKLFA--DAEKEYKEKGdesglhIIIFDELDAVCKQrgsGAGGGTGVG 402
                 5899*******************9...46666667777776453466666666654..44455666666667**************9765333333345 PP

                 HHHHHHHHHHHH- CS
       AAA_2  93 egVqrdLLqileg 105
                 + V++ LL  l+g
  KHJ32245.1 403 DSVVNQLLSKLDG 415
                 6677777766665 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.032
                 --EEEE--TTSSHHHHHHHHHHHTT-..........-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTSEEEEETGGG- CS
       AAA_2   4 isilllgptgvGktelakalaellfv......kkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEidKi 80 
                  s+ll gp g+Gkt la ++a+          + e+ +   ++s+++            ++  ++y++   + iv +D+i++i
  KHJ32245.1 590 LSVLLHGPPGSGKTALAAKIAKDSGFpfiklvSAENMVGFNEMSKIQY---------LNKVFTDAYKS--PHNIVIIDNIERI 661
                 689999*********999999988773333333333333333333333.........22223333332..2337777777776 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   9.7e-05     0.034       1      51 [.     310     352 ..     310     380 .. 0.67
   2 !   13.3   0.0   0.00023      0.08       1      59 [.     592     659 ..     592     664 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 9.7e-05
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqe 51 
                   i+lyGp+g+GK+++a+++ k l       ++++v+      +++++Y gq 
    KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLN-----SREPKVIN---GPEVLNKYVGQS 352
                   789**************777776.....33344443...555666666554 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 0.00023
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl..........klkkkdsvysrnpeddfwdgYt.gqevvvidDfg 59 
                   ++l+Gp+g GK+ la ++ak+    +          ++++ +++  +  ++ f d Y+  +++v+id + 
    KHJ32245.1 592 VLLHGPPGSGKTALAAKIAKDSGFPFiklvsaenmvGFNEMSKI--QYLNKVFTDAYKsPHNIVIIDNIE 659
                   689**************999988444565666654444444444..445666778998556666666655 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.5e-05    0.0054      25      49 ..     310     334 ..     302     355 .. 0.87
   2 !   11.4   0.0   0.00044      0.15      24      43 ..     591     610 ..     589     653 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.5e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrlpsllppl 49 
                   +ll+GppG+GKt++a+++ ++l + 
    KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNSR 334
                   89****************9999765 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00044
  Mg_chelatase  24 nlllvGppGsGKtmlakrlp 43 
                   ++ll GppGsGKt la++++
    KHJ32245.1 591 SVLLHGPPGSGKTALAAKIA 610
                   589*************9986 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   3.2e-05     0.011       5      78 ..     310     388 ..     307     403 .. 0.69
   2 !   10.6   0.0   0.00099      0.35       4      24 ..     591     613 ..     588     665 .. 0.55

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 3.2e-05
      AAA_24   5 iliyGpsgiGKTtlakel.....gpkplfidtekGlksldadkfpdie.swedfldevvelaaeladyktlviDtidele 78 
                 il+yGp+g+GKT +a+++       +p +i+  + l++  +   ++i+  ++d  +e++e + ++++++++++D +d ++
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIgkmlnSREPKVINGPEVLNKYVGQSEENIRkLFADAEKEYKE-KGDESGLHIIIFDELDAVC 388
                 89****************777766666666666655555555555554333333333333.5666777777777777765 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00099
      AAA_24   4 kiliyGpsgiGKTtlakel..gp 24 
                 ++l+ Gp+g+GKT la+++    
  KHJ32245.1 591 SVLLHGPPGSGKTALAAKIakDS 613
                 799***************96522 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.1    0.0031       1.1      22      43 ..     309     330 ..     297     337 .. 0.77
   2 !   15.7   0.0   1.8e-05    0.0063      11      43 ..     579     612 ..     573     642 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0031
                 EEEEEESTTSSHHHHHHHHCCS CS
      NB-ARC  22 vvalvGmgGvGKttlakqilnk 43 
                  + l+G +G GKt +a+qi + 
  KHJ32245.1 309 GILLYGPPGTGKTLIARQIGKM 330
                 4789**************9775 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 1.8e-05
                 HHHC.TTTSCSEEEEEEESTTSSHHHHHHHHCCS CS
      NB-ARC  11 kLle.kdelqslvvalvGmgGvGKttlakqilnk 43 
                  L++ + +  +l v l+G +G+GKt la++i ++
  KHJ32245.1 579 DLVKnSPNTTLLSVLLHGPPGSGKTALAAKIAKD 612
                 566546777888999****************999 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.038        13       1      52 [.     313     366 ..     313     381 .. 0.67
   2 !   16.2   0.0     3e-05     0.011       2      25 ..     596     619 ..     595     660 .. 0.94

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.038
                 EE-TTSSHHHHHHHHHHHH...TEEEEEHHHHHHHHHHTTTSHSSHHHHCTSHHH CS
      AAA_17   1 lGgPGsGKgtqceklveky...gfthlsaGdllreeakrgglakardemrklple 52 
                 +G+PG GK+ +++++ + +   + ++++  ++l + + +++ ++ r+ ++++++e
  KHJ32245.1 313 YGPPGTGKTLIARQIGKMLnsrEPKVINGPEVLNKYVGQSE-ENIRKLFADAEKE 366
                 7***********99988884445667776666666654444.3444444444444 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 3e-05
                 E-TTSSHHHHHHHHHHHHTEEEEE CS
      AAA_17   2 GgPGsGKgtqceklvekygfthls 25 
                 G+PGsGK+ +++k++++ gf+++ 
  KHJ32245.1 596 GPPGSGKTALAAKIAKDSGFPFIK 619
                 9********************986 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.015       5.3       3      28 ..     310     335 ..     308     342 .. 0.86
   2 !   15.1   0.0   4.7e-05     0.017       3      22 ..     592     611 ..     590     614 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.015
                 EEEEC-TTTCHHHHHHHHHHHHCTS- CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegk 28 
                 ++l G++G GKT  ++++   + +++
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNSRE 335
                 7899*************988777765 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 4.7e-05
                 EEEEC-TTTCHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklal 22 
                 v+l+G++GsGKT+L++k+a 
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAK 611
                 89****************97 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   0.00065      0.23      18      47 ..     306     337 ..     286     358 .. 0.76
   2 !   10.1   0.0    0.0017       0.6      21      45 ..     588     615 ..     569     634 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00065
                 HTEEEEEEESTTSSHHHHHHHHHHHTT--..- CS
        TsaE  18 lgdvilLeGdLGaGKTtlvrglakalgve..e 47 
                   + ilL+G+ G+GKT ++r++ k l+ +  +
  KHJ32245.1 306 HVKGILLYGPPGTGKTLIARQIGKMLNSRepK 337
                 2345********************99875452 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.0017
                 E...EEEEESTTSSHHHHHHHHHHHTT- CS
        TsaE  21 v...ilLeGdLGaGKTtlvrglakalgv 45 
                 +   +lL+G+ G+GKT+l+ ++ak  g+
  KHJ32245.1 588 TllsVLLHGPPGSGKTALAAKIAKDSGF 615
                 13459******************98876 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   5.2e-05     0.018      28      61 ..     302     335 ..     297     342 .. 0.84
   2 ?    6.3   0.0     0.018       6.3      35      55 ..     591     611 ..     582     638 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 5.2e-05
       AAA_7  28 lllknkkpvllvGptGtGKtviikdllkkldkek 61 
                 l +++ k +ll+Gp GtGKt+i++++ k l++++
  KHJ32245.1 302 LGIQHVKGILLYGPPGTGKTLIARQIGKMLNSRE 335
                 55889999*****************999998665 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.018
       AAA_7  35 pvllvGptGtGKtviikdllk 55 
                 +vll Gp G+GKt+++ ++ k
  KHJ32245.1 591 SVLLHGPPGSGKTALAAKIAK 611
                 69************9988765 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0   0.00026     0.093      44      72 ..     304     332 ..     287     340 .. 0.84
   2 !    8.5   0.0    0.0043       1.5      49      70 ..     591     612 ..     573     658 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00026
   IstB_IS21  44 iekkenivllGpsGvGKshlaialgveav 72 
                 i++ ++i+l Gp+G+GK+ +a  +g+   
  KHJ32245.1 304 IQHVKGILLYGPPGTGKTLIARQIGKMLN 332
                 677789****************9998765 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0043
   IstB_IS21  49 nivllGpsGvGKshlaialgve 70 
                 +++l Gp+G GK+ la+ ++++
  KHJ32245.1 591 SVLLHGPPGSGKTALAAKIAKD 612
                 5899************998865 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0    0.0012      0.42       2      38 ..     310     352 ..     309     371 .. 0.78
   2 !   10.3   0.0    0.0017       0.6       2      27 ..     592     618 ..     591     633 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.0012
      AAA_28   2 ivitGgestGKTtlleaLaar....gypvv..pEaareileek 38 
                 i + G+++tGKT +++++ ++    + +v+  pE+  +++ + 
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMlnsrEPKVIngPEVLNKYVGQS 352
                 7899***********9988544444888999999999998554 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0017
      AAA_28   2 ivitGgestGKTtlleaLaar.gypvv 27 
                 + + G++++GKT l++++a++ g+p +
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAKDsGFPFI 618
                 7899***************98788866 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.033        12      23      48 ..     310     335 ..     300     340 .. 0.83
   2 ?    3.1   0.1      0.21        75      93     130 ..     347     387 ..     337     395 .. 0.74
   3 ?    5.8   0.0     0.032        11      23      42 ..     592     611 ..     580     617 .. 0.86
   4 ?    3.0   0.0      0.24        84     103     155 ..     635     686 ..     616     711 .. 0.72

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.033
    ATPase_2  23 yfiYGpegsGKtaLlkeiienledkd 48 
                 +++YGp g GKt + ++i + l++ +
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNSRE 335
                 689*************9988776655 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.21
    ATPase_2  93 eilkeksklvfkaielllekikkkgkk...iiiiiDelqkl 130
                 + + +  +++ k ++++ ++ k+kg +    iii+Del  +
  KHJ32245.1 347 KYVGQSEENIRKLFADAEKEYKEKGDEsglHIIIFDELDAV 387
                 333466777777777788888888888**99******9876 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.032
    ATPase_2  23 yfiYGpegsGKtaLlkeiie 42 
                 +++ Gp gsGKtaL  +i++
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAK 611
                 6789**********999986 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.24
    ATPase_2 103 fkaielllekikkkgkkiiiiiDelqklidlglngaellvkeLlnliesltke 155
                  +++++++ +  k+    i+iiD + ++i+    g ++l   L+ l++ ltk+
  KHJ32245.1 635 IQYLNKVFTDAYKSPH-NIVIIDNIERIIEWVPIGPRFLNPVLQALMVLLTKQ 686
                 3777777777777755.67899*******999888999888888888888876 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0    0.0016      0.57      24      50 ..     309     335 ..     299     343 .. 0.80
   2 !    9.5   0.0    0.0022      0.76      21      47 ..     587     614 ..     573     647 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0016
                      -EEEECSTTSSHHHHHHHHHHHSTTTT CS
  Sigma54_activat  24 svlitGesGtGKellaraiheaskrke 50 
                       +l+ G  GtGK+l+ar+i +  + +e
       KHJ32245.1 309 GILLYGPPGTGKTLIARQIGKMLNSRE 335
                      69****************988655544 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0022
                      SS.S-EEEECSTTSSHHHHHHHHHHHST CS
  Sigma54_activat  21 td.lsvlitGesGtGKellaraiheask 47 
                      t+ lsvl++G  G+GK+ la +i + s 
       KHJ32245.1 587 TTlLSVLLHGPPGSGKTALAAKIAKDSG 614
                      33489****************9987654 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.2   7.3e-05     0.026       4      38 ..     273     326 ..     271     334 .. 0.81
   2 ?    4.8   0.0     0.043        15      21      38 ..     591     608 ..     566     662 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 7.3e-05
      ATPase   4 gIeglDeilk...................gGipegrvvlitGepGtGKtifalq 38 
                 gI glD+ +                     Gi + + +l++G pGtGKt++a q
  KHJ32245.1 273 GIGGLDTEFGaifrrafasrifppgliekLGIQHVKGILLYGPPGTGKTLIARQ 326
                 666777666556667777777777777768*********************987 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.043
      ATPase  21 vvlitGepGtGKtifalq 38 
                 +vl+ G pG+GKt +a++
  KHJ32245.1 591 SVLLHGPPGSGKTALAAK 608
                 689***********9987 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0    0.0011      0.39      20      44 ..     310     334 ..     301     371 .. 0.73
   2 !    8.6   0.0    0.0042       1.5      20      39 ..     592     611 ..     578     640 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.0011
      AAA_11  20 tliqGPPGtgKTktivellsqllsr 44 
                  l+ GPPGtgKT    ++ ++l+sr
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNSR 334
                 5899********9998888888644 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0042
      AAA_11  20 tliqGPPGtgKTktivells 39 
                 +l++GPPG+gKT   +++ +
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAK 611
                 799*********98887765 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0    0.0012      0.41     117     138 ..     310     331 ..     301     334 .. 0.90
   2 !    6.9   0.0    0.0085         3     117     146 ..     592     623 ..     583     630 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0012
   Parvo_NS1 117 vwfyGpantGktnlaeaIakav 138
                 +++yGp+ tGkt +a++I k +
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKML 331
                 89***************98765 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0085
   Parvo_NS1 117 vwfyGpantGktnlaeaIak..avplygcvnw 146
                 v+++Gp+  Gkt la+ Iak  ++p+ + v+ 
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAKdsGFPFIKLVSA 623
                 7899***************8334566666655 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0049       1.7      36      53 ..     310     327 ..     297     383 .. 0.87
   2 !    7.5   0.1    0.0078       2.7      36      54 ..     592     610 ..     590     616 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0049
      AAA_25  36 allaGapgtGKttlaldl 53 
                 +ll+G+pgtGKt +a ++
  KHJ32245.1 310 ILLYGPPGTGKTLIARQI 327
                 69***********99775 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0078
      AAA_25  36 allaGapgtGKttlaldla 54 
                 +ll G+pg+GKt+la  +a
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIA 610
                 69************98876 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.1   0.00015     0.052       7      98 ..     303     419 ..     301     437 .. 0.76
   2 ?    5.1   0.1     0.089        31      14      33 ..     592     611 ..     590     615 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 0.00015
                 EEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.......................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......................... RF
    ABC_tran   7 klkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.......................... 79 
                  +++ + + + G+ G+GK+ +++ + ++l+  e ++ ++g ++ ++   +++++i+ l+ +++  ++ +  e+                          
  KHJ32245.1 303 GIQHVKGILLYGPPGTGKTLIARQIGKMLNSREPKV-INGPEVLNKYVGQSEENIRKLFADAEKEYKEKGDESglhiiifdeldavckqrgsgagggtg 400
                 5667777899**************************.********9**************988777776665577777777666655555555555444 PP

                 HHHTCHHHHHHHSTTGGTT CS
                 xxxxxxxxxxxxxxxxxxx RF
    ABC_tran  80 esdeeiekalsklglkelk 98 
                   d+ ++++lskl+ ++  
  KHJ32245.1 401 VGDSVVNQLLSKLDGVDQL 419
                 4444466666666665555 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.089
                 EEEEESTTSSHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllag 33 
                 v + G+ G+GK+ L++ +a+
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAK 611
                 6799**********998876 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0    0.0017      0.61      22      50 ..     311     339 ..     300     385 .. 0.88
   2 ?    6.5   0.0     0.018       6.2      21      39 ..     592     610 ..     579     618 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0017
      AAA_30  22 vltGpAGtGKttalkalreaweaaggrvi 50 
                 +l Gp+GtGKt + +++ +++++++ +vi
  KHJ32245.1 311 LLYGPPGTGKTLIARQIGKMLNSREPKVI 339
                 688**************999999987776 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.018
      AAA_30  21 avltGpAGtGKttalkalr 39 
                 ++l+Gp+G+GKt + ++++
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIA 610
                 689*********9988775 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0    0.0019      0.68      12      38 ..     309     335 ..     303     365 .. 0.86
   2 ?    5.3   0.0     0.064        23      13      30 ..     592     609 ..     584     613 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.0019
      AAA_19  12 vllvtaGpGtGKTrvlkhivallvelg 38 
                  +l+ ++pGtGKT + ++i ++l++++
  KHJ32245.1 309 GILLYGPPGTGKTLIARQIGKMLNSRE 335
                 5899***********999999887665 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.064
      AAA_19  13 llvtaGpGtGKTrvlkhi 30 
                 +l+ ++pG+GKT +  +i
  KHJ32245.1 592 VLLHGPPGSGKTALAAKI 609
                 7899********876655 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0    0.0026      0.93       4      25 ..     310     331 ..     308     391 .. 0.67
   2 ?    6.7   0.0     0.011       3.8       4      25 ..     592     613 ..     591     649 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0026
     DUF2075   4 vlVtGvaGtGKtvvllnllael 25 
                 +l  G +GtGKt+++ ++   l
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKML 331
                 5778************998888 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.011
     DUF2075   4 vlVtGvaGtGKtvvllnllael 25 
                 vl +G +G+GKt ++ +++ + 
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAKDS 613
                 5789*************99886 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0     0.015       5.1      27      58 ..     299     330 ..     296     349 .. 0.81
   2 ?   -1.6   0.0       4.3   1.5e+03     114     132 ..     370     388 ..     344     393 .. 0.74
   3 !    7.2   0.0    0.0084       2.9      24      58 ..     578     612 ..     568     625 .. 0.89
   4 ?   -2.5   0.0       7.9   2.8e+03     144     174 ..     747     777 ..     738     790 .. 0.72

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.015
        TniB  27 leypkrkrmpnlllvGdsnnGKtmivekFarl 58 
                 +e+   + ++ +ll+G++ +GKt i+++  ++
  KHJ32245.1 299 IEKLGIQHVKGILLYGPPGTGKTLIARQIGKM 330
                 55666678899**************9987665 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 4.3
        TniB 114 llrelkvrvLiiDEihnll 132
                   +e +++++i+DE++ + 
  KHJ32245.1 370 KGDESGLHIIIFDELDAVC 388
                 5567788999999998775 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0084
        TniB  24 eeLleypkrkrmpnlllvGdsnnGKtmivekFarl 58 
                  +L+++ +++   ++ll+G++  GKt+++ k a++
  KHJ32245.1 578 VDLVKNSPNTTLLSVLLHGPPGSGKTALAAKIAKD 612
                 688999999999*****************998876 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 7.9
        TniB 144 nalksLgnelkipivlvGteealralrtDpq 174
                  +l +L +  +   v++G++++l a+ + +q
  KHJ32245.1 747 SSLNTLRDITDTDQVGIGIKKVLLAVGEAQQ 777
                 5556666666667789999999999887776 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0    0.0019      0.68       2      38 ..     310     346 ..     309     389 .. 0.84
   2 ?    5.5   0.0      0.04        14       2      29 ..     592     619 ..     591     661 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0019
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdllP 38 
                 +ll g PG++ktl++++++k+l+ +  ++   p++l 
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNSREPKVINGPEVLN 346
                 7999*******************99988888888775 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.04
       AAA_3   2 vllegvPGlaktllvkalakaldlefkr 29 
                 vll+g PG +kt l+ ++ak  +  f +
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAKDSGFPFIK 619
                 89*****************987776655 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0061       2.1      17      96 ..     300     374 ..     297     391 .. 0.77
   2 ?    5.6   0.0     0.042        15      26      46 ..     591     611 ..     564     613 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0061
                 ......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B-- CS
      ResIII  17 eklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkka 96 
                 ekl +++ k +l+  + GtGKTl+a ++ + l + +++     ++++ ++l++   + ++ + + +++++k+++++++++
  KHJ32245.1 300 EKLGIQHVKGILLYGPPGTGKTLIARQIGKMLNSREPK-----VINGPEVLNKYVGQSEENIRKLFADAEKEYKEKGDES 374
                 666667778899999**********9999999887664.....6788888888887777777777777777777766655 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.042
                 EEEEEESTTSTHHHHHHHHHH CS
      ResIII  26 rglikmaTGtGKTlvaaklie 46 
                  +l++ + G+GKT +aak+++
  KHJ32245.1 591 SVLLHGPPGSGKTALAAKIAK 611
                 678999************986 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0055       1.9      21      40 ..     309     328 ..     299     343 .. 0.80
   2 ?    6.4   0.0     0.016       5.5      22      40 ..     592     610 ..     575     663 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0055
                 EEEEE--TTSSTTHHHHHHH CS
        PhoH  21 ivfaiGpaGtGKtylavala 40 
                  +   Gp GtGKt++a +++
  KHJ32245.1 309 GILLYGPPGTGKTLIARQIG 328
                 56789***********9887 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.016
                 EEEE--TTSSTTHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavala 40 
                 v   Gp G+GKt la  +a
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIA 610
                 6678***********9887 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.016       5.5       2      30 ..     310     338 ..     309     347 .. 0.89
   2 ?    7.3   0.0     0.011         4       2      21 ..     592     611 ..     591     616 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.016
                 EEEE--TTSSHHHHHHHHHHHH...GGGE CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkssgvkv 30 
                 +++ GppG+GKt + +++ ++l+s++ kv
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNSREPKV 338
                 6788******************9987665 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.011
                 EEEE--TTSSHHHHHHHHHH CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvle 21 
                 v++ GppG+GKt l  k+++
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAK 611
                 7899*************986 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.076        27      19      45 ..     310     336 ..     304     366 .. 0.84
   2 !   10.1   0.0   0.00099      0.35      18      40 ..     591     613 ..     579     631 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.076
  Zeta_toxin  19 illgGqpGAGKselaellkdelerqgn 45 
                 ill G pG GK+ +a+ + + l++++ 
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNSREP 336
                 8999*************9998875554 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00099
  Zeta_toxin  18 lillgGqpGAGKselaellkdel 40 
                 ++ll G pG+GK++la++++++ 
  KHJ32245.1 591 SVLLHGPPGSGKTALAAKIAKDS 613
                 799***************99876 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0      0.02       7.2      47      81 ..     309     343 ..     299     368 .. 0.79
   2 ?    6.1   0.0     0.028       9.8      48      77 ..     592     621 ..     574     644 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.02
       Rad17  47 iLLisGPsGCgkstvvkvLskelgiklrewlnpvs 81 
                  +L+ GP+G gk+ + + + k l  +  + +n+ +
  KHJ32245.1 309 GILLYGPPGTGKTLIARQIGKMLNSREPKVINGPE 343
                 46899******************999999998755 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.028
       Rad17  48 LLisGPsGCgkstvvkvLskelgiklrewl 77 
                 +L+ GP+G gk+     ++k  g+ +++ +
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAKDSGFPFIKLV 621
                 589*****************9997666544 PP

>> IPT  Isopentenyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.92   3.2e+02       5      23 ..     311     329 ..     307     333 .. 0.87
   2 ?   11.8   0.0   0.00032      0.11       5      32 ..     593     620 ..     590     633 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.92
         IPT   5 lifGatttGKtaeaiklak 23 
                 l++G+ +tGKt  a ++ k
  KHJ32245.1 311 LLYGPPGTGKTLIARQIGK 329
                 89*********99988876 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.00032
         IPT   5 lifGatttGKtaeaiklaketgapvivl 32 
                 l++G+ ++GKta a k+ak+ g+p i l
  KHJ32245.1 593 LLHGPPGSGKTALAAKIAKDSGFPFIKL 620
                 899*********************9976 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0067       2.4       4      33 ..     310     339 ..     309     374 .. 0.80
   2 ?    4.2   0.0     0.069        24       4      23 ..     592     611 ..     590     626 .. 0.93

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0067
                 EEEE--TTSSHHHHHHHHHHHHHHTT--EE CS
       KTI12   4 vvltGlPssGKstrakeLakaleeekrsvv 33 
                 ++l G P +GK+ +a+++ k l++++ +v+
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNSREPKVI 339
                 799*******************99777664 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.069
                 EEEE--TTSSHHHHHHHHHH CS
       KTI12   4 vvltGlPssGKstrakeLak 23 
                 v+l G P sGK+ +a+++ak
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAK 611
                 899*************9986 PP

>> Hydin_ADK  Hydin Adenylate kinase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0       1.5   5.4e+02       2      22 ..     310     330 ..     309     334 .. 0.86
   2 ?   10.7   0.1    0.0013      0.46       2      23 ..     592     613 ..     591     622 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 1.5
   Hydin_ADK   2 iivhGaPlsGKtatavtLakk 22 
                 i++ G+P +GKt +a ++ k 
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKM 330
                 7889**********9998886 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.0013
   Hydin_ADK   2 iivhGaPlsGKtatavtLakkY 23 
                 +++hG+P sGKta a+++ak  
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAKDS 613
                 789****************975 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0       1.1   3.7e+02       4      70 ..     313     383 ..     310     386 .. 0.60
   2 ?    9.9   0.0    0.0016      0.55       2      69 ..     593     656 ..     592     660 .. 0.57

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 1.1
  Viral_helicase1   4 hGvpGcGKStlirkllrts..liltvnrptaelltegkpklpnlsvrtvdsflmalvks...tkgkililDE 70 
                       G pG GK+ + r++ ++   +  +v++   e+l++ + +++ +  + + ++++  +++    + +i+i+DE
       KHJ32245.1 313 YGPPGTGKTLIARQIGKMLnsREPKVING-PEVLNKYVGQSEENIRKLFADAEKEYKEKgdeSGLHIIIFDE 383
                      588******99999988844433333333.456666665555555556666666555554444566777776 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0016
  Viral_helicase1   2 vvhGvpGcGKStlirkllrts.liltvnrptaelltegkpklpnlsvrtvdsflmalvkstkgkililD 69 
                      + hG pG+GK+ l  k++++s   + + +++ +++    + + +  ++    f+ a + +   +i+i+D
       KHJ32245.1 593 LLHGPPGSGKTALAAKIAKDSgFPFIKLVSAENMVGFNEMSKIQYLNK---VFTDAYKSP--HNIVIID 656
                      68******************7744444444444444433222222222...222222222..5677776 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0      0.12        42       3      23 ..     312     332 ..     310     336 .. 0.88
   2 ?    6.7   0.0     0.015       5.3       3      28 ..     594     619 ..     592     655 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.12
                     EE-STTSSHHHHHHHHHHHHT CS
  Cytidylate_kin   3 iDGPagsGKssvaralaeklg 23 
                     + GP g+GK  +ar++++ l+
      KHJ32245.1 312 LYGPPGTGKTLIARQIGKMLN 332
                     67***************9997 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.015
                     EE-STTSSHHHHHHHHHHHHT-EEEE CS
  Cytidylate_kin   3 iDGPagsGKssvaralaeklglkyld 28 
                     + GP gsGK ++a ++a+  g+ +++
      KHJ32245.1 594 LHGPPGSGKTALAAKIAKDSGFPFIK 619
                     68*****************9999886 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0      0.22        76       4      32 ..     310     338 ..     307     340 .. 0.86
   2 ?    7.2   0.0    0.0098       3.5       4      23 ..     592     611 ..     589     614 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.22
                 EEEEESTTSSHHHHHHHHHHHHHHTTS-E CS
       SRP54   4 illvGlqGaGKTttlaKLaallkkegkkv 32 
                 ill G+ G+GKT  + ++ ++l++++ kv
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNSREPKV 338
                 89**********99999999998887666 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0098
                 EEEEESTTSSHHHHHHHHHH CS
       SRP54   4 illvGlqGaGKTttlaKLaa 23 
                 +ll G+ G+GKT  +aK+a+
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAK 611
                 799***************97 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.076        27      23      43 ..     309     329 ..     299     356 .. 0.81
   2 ?   -2.0   0.0       9.9   3.5e+03      28      51 ..     397     420 ..     396     444 .. 0.71
   3 ?    4.5   0.0       0.1        36      22      46 ..     590     614 ..     583     641 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.076
                      -EEEEEETT--HHHHHHCC-- CS
  Sigma54_activ_2  23 pvfltGekGsgkelvArlLhk 43 
                       ++l G++G+gk+l+Ar + k
       KHJ32245.1 309 GILLYGPPGTGKTLIARQIGK 329
                      589*************98865 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 9.9
                      EETT--HHHHHHCC--TTS-EE-- CS
  Sigma54_activ_2  28 GekGsgkelvArlLhknsgpwlei 51 
                      G+ G g ++v +lL+k +g ++  
       KHJ32245.1 397 GGTGVGDSVVNQLLSKLDGVDQLN 420
                      789999999999999998875443 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.1
                      S-EEEEEETT--HHHHHHCC--TTS CS
  Sigma54_activ_2  22 lpvfltGekGsgkelvArlLhknsg 46 
                      l v+l G++Gsgk+  A  ++k sg
       KHJ32245.1 590 LSVLLHGPPGSGKTALAAKIAKDSG 614
                      679***********99988887664 PP

>> KAP_NTPase  KAP family P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.62   2.2e+02      23      86 ..     310     368 ..     304     377 .. 0.69
   2 ?   -1.8   0.0       3.9   1.4e+03     153     185 ..     352     387 ..     345     392 .. 0.79
   3 ?    7.5   0.0    0.0061       2.1       9      43 ..     578     612 ..     574     614 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.62
  KAP_NTPase  23 vgLygkWGsGKssllnkledelkefakpvrflfaefnawsfkggddavaellaaLadaleeeyg 86 
                 + Lyg+ G+GK+ +   + + l+++    + ++++    + k+  ++ +e ++ L+  +e+ey+
  KHJ32245.1 310 ILLYGPPGTGKTLIARQIGKMLNSR----EPKVINGPEVLNKY-VGQSEENIRKLFADAEKEYK 368
                 789*********9999999999999....44444444444443.44555555555555555555 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 3.9
  KAP_NTPase 153 lqteveelladmektLda...lqkrlVvviDdLDrc 185
                 + + + +l+ad+ek+ ++   ++   +++ D+LD +
  KHJ32245.1 352 SEENIRKLFADAEKEYKEkgdESGLHIIIFDELDAV 387
                 566788899999999999998777778888***975 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.0061
  KAP_NTPase   9 adilseptlatpivvgLygkWGsGKssllnklede 43 
                 +d+++++  +t ++v L g+ GsGK++l +k+ ++
  KHJ32245.1 578 VDLVKNSPNTTLLSVLLHGPPGSGKTALAAKIAKD 612
                 677777777999******************99875 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.24        85       4      32 ..     311     339 ..     309     344 .. 0.80
   2 ?    6.7   0.0     0.014       4.9       3      22 ..     592     611 ..     590     633 .. 0.87
   3 ?   -2.5   0.0       9.6   3.4e+03      24      48 ..     724     748 ..     717     756 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.24
                 EEEESTTCCHHHHHHHHHCT--SS-EEEE CS
        cobW   4 vltGflGsGKTtLlnhllenraglklavi 32 
                 +l G++G+GKT + +++ +  ++++  vi
  KHJ32245.1 311 LLYGPPGTGKTLIARQIGKMLNSREPKVI 339
                 689********888887777777777777 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.014
                 EEEEESTTCCHHHHHHHHHC CS
        cobW   3 tvltGflGsGKTtLlnhlle 22 
                 ++l G++GsGKT+L  ++ +
  KHJ32245.1 592 VLLHGPPGSGKTALAAKIAK 611
                 6799**********888765 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 9.6
                 --SS-EEEEESS-SSCHCCCCCCHC CS
        cobW  24 raglklavivNefgevsiDaellre 48 
                 +++++la i+ e++ ++ D++l+++
  KHJ32245.1 724 NSHKELASILREVQAFNNDNDLVSS 748
                 67899999999***9****999976 PP

>> Vps4_C  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0     0.001      0.36      21      50 ..     521     552 ..     512     555 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.001
      Vps4_C  21 sdkllePpvtlkDflkalkkarpt..VskeDL 50 
                 sd++ + +v+++Df+kal +++p   Vs+e+L
  KHJ32245.1 521 SDDIENMKVNRSDFIKALDEVKPAfgVSEEEL 552
                 6889999****************755888877 PP

>> DAP3  Mitochondrial ribosomal death-associated protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.14        49      23      45 ..     307     329 ..     298     352 .. 0.79
   2 ?    5.8   0.0     0.018       6.5      10      61 ..     576     624 ..     573     652 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.14
                 --EEEEE-SSSSSTTTTHHHHHH CS
        DAP3  23 vkrlvltGekgsGKSvlLlqala 45 
                 vk ++l+G +g+GK++   q+  
  KHJ32245.1 307 VKGILLYGPPGTGKTLIARQIGK 329
                 56689**********98877755 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.018
                 HHHHHTTS-SSS---EEEEE-SSSSSTTTTHHHHHHHGGGS--EEEEES-GG CS
        DAP3  10 likklkkadkkkkvkrlvltGekgsGKSvlLlqalayAlekgwvvlhvpeae 61 
                 l+  l k++ +++   ++l+G +gsGK+ l +    +A ++g+  +++ +ae
  KHJ32245.1 576 LFVDLVKNSPNTTLLSVLLHGPPGSGKTALAA---KIAKDSGFPFIKLVSAE 624
                 566778888999999*************8744...34555555555555555 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0      0.18        65      21      36 ..     307     321 ..     300     326 .. 0.83
   2 ?    5.6   0.0     0.039        14      24      38 ..     591     605 ..     577     609 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.18
      AAA_29  21 lkgatlltGpsGsGKS 36 
                 +kg +ll Gp G+GK+
  KHJ32245.1 307 VKG-ILLYGPPGTGKT 321
                 567.9**********6 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.039
      AAA_29  24 atlltGpsGsGKSTl 38 
                 ++ll Gp GsGK++l
  KHJ32245.1 591 SVLLHGPPGSGKTAL 605
                 489*********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (799 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       602  (0.0335769); expected 358.6 (0.02)
Passed bias filter:                      546  (0.0304535); expected 358.6 (0.02)
Passed Vit filter:                        99  (0.00552178); expected 17.9 (0.001)
Passed Fwd filter:                        51  (0.00284455); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              51  [number of targets reported over threshold]
# CPU time: 0.81u 0.30s 00:00:01.11 Elapsed: 00:00:00.46
# Mc/sec: 5233.46
//
Query:       KHJ32246.1  [L=354]
Description: putative sucrase ferredoxin domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00014   22.0   0.7    0.00053   20.0   0.2    2.0  2  NICE-3    NICE-3 protein
  ------ inclusion threshold ------
      0.011   15.9   0.0      0.019   15.2   0.0    1.4  1  DUF4129   Domain of unknown function (DUF4129)


Domain annotation for each model (and alignments):
>> NICE-3  NICE-3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       0.1   9.2e+02      13      77 ..      51     120 ..      42     148 .. 0.64
   2 !   20.0   0.2   5.9e-08   0.00053     118     179 ..     228     288 ..     211     290 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.1
      NICE-3  13 algvlifvllfifakRqimRfalksrrgphvpi...Ghgakkslkkeierrlelvskik..yePrllses 77 
                    +++++l fi+  ++    ++  +  p++ i   + +++k+++k + + l++   i+    Pr  +e+
  KHJ32246.1  51 GSYFMTLLLAFILYASRLYTDSVTLKAIPKTWIpveSGDVNKKVRKMVLASLNRSALIAwnSRPRTSQEQ 120
                 4446788888888777777777666666665552234578888888888888888777733456666555 PP

  == domain 2  score: 20.0 bits;  conditional E-value: 5.9e-08
      NICE-3 118 klgrhpgenlrsyLlrlrssplksvrkslidqlldlyehARhgpeeFgeeeylkyqelleeL 179
                  l+r+++  lr+y+ +l + ++ + + ++++++++lye  R+++++  e+e++++++ ++++
  KHJ32246.1 228 ILKRRAAMGLREYINHLCKLNVIT-TPNMVHEFISLYEYSRFSAKPLSEQEFTELMKHFRQI 288
                 5789999999***99999555554.479***************************9998886 PP

>> DUF4129  Domain of unknown function (DUF4129)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   2.1e-06     0.019      13      69 .]     228     286 ..     221     286 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 2.1e-06
     DUF4129  13 gldrrpgeTprEyarrv..riapspaaalaalaelfeearYGgrpasaeeyrrlvealr 69 
                  l rr+++  rEy  ++      +    ++++  l+e  r++  p+s++e+ +l++ +r
  KHJ32246.1 228 ILKRRAAMGLREYINHLckLNVITTPNMVHEFISLYEYSRFSAKPLSEQEFTELMKHFR 286
                 6889*************98444567779**************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       887  (0.0494729); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2583.80
//
Query:       KHJ32247.1  [L=756]
Description: putative anthranilate synthase component 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.5e-90  301.0   0.6    8.9e-90  300.3   0.0    1.6  2  IGPS           Indole-3-glycerol phosphate synthase
      7e-45  153.2   0.0    3.5e-41  141.1   0.0    2.4  2  PRAI           N-(5'phosphoribosyl)anthranilate (PRA) isomera
    1.5e-44  152.1   0.0    2.9e-44  151.1   0.0    1.5  1  GATase         Glutamine amidotransferase class-I
    0.00024   20.9   3.3       0.15   11.9   0.1    3.0  3  QRPTase_C      Quinolinate phosphoribosyl transferase, C-term
     0.0058   16.4   1.3      0.079   12.7   1.3    2.2  1  Peptidase_C26  Peptidase C26
  ------ inclusion threshold ------
      0.048   13.1   0.1       0.22   10.9   0.0    2.0  2  His_biosynth   Histidine biosynthesis protein
      0.064   12.6   2.3        5.8    6.2   0.0    3.4  3  TMP-TENI       Thiamine monophosphate synthase


Domain annotation for each model (and alignments):
>> IGPS  Indole-3-glycerol phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  300.3   0.0   3.5e-93   8.9e-90       1     252 [.     242     502 ..     242     504 .. 0.98
   2 ?   -3.3   0.1       1.6   4.1e+03     167     184 ..     528     545 ..     523     546 .. 0.79

  Alignments for each domain:
  == domain 1  score: 300.3 bits;  conditional E-value: 3.5e-93
                 HHHCHHHHHHHHHHHHCCS-G..GCCCCG....-SS-SS-HHHHCHCHTTS-EEEEEE-SEETTTEESBSS--HHHHHHHHTTT.-SEEEEE--CCCC- CS
        IGPS   1 lekivaekkeevaeakkrqsl..adleaav..klakpkrsfaeaLresekklaliaEvKkaSPskgliredfdpaeiAkkyeeagAsaiSVLteekyFq 95 
                 le+i+a++k++++ +k+ +sl  +dl++a+   la+p +sf+++L +s   l+l+aE+K+aSPskgli   ++++++A++y+ agAs+iSVLte+k+F+
  KHJ32247.1 242 LETIFAHRKAAISLQKEMPSLrpKDLQDAYdlGLAPPLISFIDRLTKSPFPLSLMAEIKRASPSKGLISLSINAPAQARAYALAGASVISVLTEPKWFK 340
                 789******************999****998899***************************************************************** PP

                 --CCHHHHHHHH-SS-EEE.....ES---SHHHHHHHHHCT-SEEEEECCCS-HHHHHHHHHHHCCTT-EEEEEESSHHHHHHHHHTT-SEEEEESEET CS
        IGPS  96 GsledLrevrqavslpvlr.....KdFiideyqieearalgadaiLLivkvledeeleelaeaakslglevLvEvhdeeeleralklgakiiGvNnRnL 189
                 G+++dLr+vr +++ +++r     K+Fi++eyqi e+r++gad++LLivk+l++++l el ++++slg+e+LvEv+++ee+++alk+g+k+iGvNnRnL
  KHJ32247.1 341 GNIDDLRNVRLSLEGMINRpailrKEFIFEEYQILESRLAGADTVLLIVKMLDEKKLIELFQYSQSLGMEPLVEVNTHEEMKTALKIGSKVIGVNNRNL 439
                 ***************999999999*************************************************************************** PP

                 TTTEE-CHHHHHHCHCC-TTSEEEEESSS-SHHHHHHHCCTT-SEEEESHHHHC-TTHHHHHH CS
        IGPS 190 ktlevdlntteeLaklvpkdvllvaeSGiktredveklkeegvnafLvGeslmrqedvekair 252
                  ++evdl+tt++L ++vp+ ++++a+SGik ++dve++ ++ v+a+LvGe+lmr+++ e +++
  KHJ32247.1 440 INFEVDLETTNRLLDKVPEGITICALSGIKGAKDVEAYLKNRVSAVLVGEALMRAQNPETFVQ 502
                 ******************99*************************************999987 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.6
                 SHHHHHHHHHTT-SEEEE CS
        IGPS 167 deeeleralklgakiiGv 184
                 ++e  + a+k+ga++iG+
  KHJ32247.1 528 NAEVAAEAIKAGANLIGI 545
                 566667899999999998 PP

>> PRAI  N-(5'phosphoribosyl)anthranilate (PRA) isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0   0.00026      0.65       1      47 [.     521     567 ..     521     573 .. 0.92
   2 !  141.1   0.0   1.4e-44   3.5e-41      45     193 ..     603     750 ..     576     751 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00026
                 TCE----SHHHHHHHHHHTSSEEEEE--TTBTTB--HHHHHHHCCCS CS
        PRAI   1 akicgltrasdvkaavkagadelglifaesskrevseeqaqellekv 47 
                 +kicg+++a+ +++a+kaga+ +g+i a+  +r++s+e a ++++ v
  KHJ32247.1 521 IKICGMRNAEVAAEAIKAGANLIGIILAPGKRRSISPEVAMAISSIV 567
                 59*************************************99987765 PP

  == domain 2  score: 141.1 bits;  conditional E-value: 1.4e-44
                 CCS--EEEEEESSS-HHHHHHHHHHCTECEEEE-CGG.-HHHHHHHHHHS-TTSEEEEEEE-SSS--S-SSTT-SEEEEESSS-SSSXXXXGGGGTTSX CS
        PRAI  45 ekvpaklVGVfvNqpieevlriaqelgldvvQLHGdedeqeyeellktelpvikalkvaesvdevkearradhvdllllDsgaGGtGelldwsliskll 143
                 ++ p+ lVGVf+Nqp++e+l++++ ++ld+vQLHG+e + e+++ ++  +pv + + + +     +  +r  h  l+llDs  GG+G++l +s+++ +l
  KHJ32247.1 603 RDYPL-LVGVFQNQPLSEILELQKLYKLDIVQLHGNE-PLEWARIIP--VPVLRSFLPGQ----PSLRTRGFH-ILPLLDSDSGGSGKRLCMSAVKAVL 692
                 44444.9******************************.*********..***********....888888888.9***********************9 PP

                 X....TTEEEESSXXTTTHHHHHT......TXXSEEEEXGGGEEETEEXHHHHHHHHH CS
        PRAI 144 ks...lkviLAGGLtpeNvaeaik.....legvlgvDvssGVEtnGvkDlekirkfvq 193
                  +   l+v+LAGGL+peNv+++i+      e+++gvDvssG+E+nG++  +ki++f+ 
  KHJ32247.1 693 SKdssLRVFLAGGLNPENVKDVIEeaaelAEKIIGVDVSSGIEENGIQSIAKIQAFIS 750
                 88999***********************99**************************86 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.1   0.0   1.1e-47   2.9e-44       1     187 [.      27     217 ..      27     219 .. 0.95

  Alignments for each domain:
  == domain 1  score: 151.1 bits;  conditional E-value: 1.1e-47
                 EEEESSTSTHHHHHHHHHHTT-EEEEEETTSHHHHHHHTHHSTSEEEEEEESSCTT..TTTHHHHHHHHCTSTS-EEEETHHHHHHHHHTTTEEEEEEC CS
      GATase   1 lliDnydsvtenlvhalvelgvkvevvpidasaeeilellknpdgilvsgGpgspg..vegkieaikearenkiPiLGICLGmQllaiefgrkvvkeke 97 
                 +liDn ds+++n+ ++l+  g++v+v+++++  +++l     p+++++s+Gpg+p    + + +ai ++++ kiPiLG+CLG Q++++  g++v  +  
  KHJ32247.1  27 VLIDNFDSFVWNIYQYLRLEGAYVTVYRNNEISLKEL-VDLLPTQLVISPGPGHPRtdSGISKDAIAHFAG-KIPILGVCLGQQCMIDLWGGDVSYAG- 122
                 58****************************8555554.4788**************9999***********.**************************. PP

                 EEEEEEEEEEEETTTCGGTTTTSEEEEEEEEEEEEESGCHHHTTEEEEEEEETTE......EEEEEEEETTTEEEESSBTTSTTSTTHHHHHHHHH CS
      GATase  98 kehhggtmrlgddetallyglknevierhrHryevnpkelepaglevtaksedde......elmeiiekknpfvgvQFHPEststpegpellfnfl 187
                 +  hg+t++l++d++++++g ++ v ++++H+++ +  +++p++le+t + ++++      ++m++++k++ + gvQFHPEs++t++g+ +l+nf+
  KHJ32247.1 123 EIFHGKTSPLQHDGKGVYQGIPQGVLVTRYHSLAGTY-QTLPECLEITSWVSHNGndskkgTIMGVRHKEYLIEGVQFHPESILTEGGNFMLKNFV 217
                 9***********************************8.**********9988777788899*********************************95 PP

>> QRPTase_C  Quinolinate phosphoribosyl transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       3.5   9.1e+03      98     111 ..      21      34 ..      20      63 .. 0.78
   2 !   11.9   0.1   5.7e-05      0.15      84     161 ..     412     494 ..     393     498 .. 0.76
   3 !    8.2   0.4   0.00076       1.9     110     155 ..     707     752 ..     687     756 .] 0.85

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 3.5
                 HHT-SEEEEES--H CS
   QRPTase_C  98 eaeadiimLDnfsv 111
                 e+  +++++Dnf++
  KHJ32247.1  21 ETASNVVLIDNFDS 34 
                 56678999999976 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 5.7e-05
                 EEEESSHHHHHHHHHHT-SEEEEES--HHHHHHHHHHHHHHSTT....SEEEE.ESS--TTTHHHHHCTT-SEEEECHHCHTB CS
   QRPTase_C  84 evevesleeleevleaeadiimLDnfsveelkkaveelkeknkr....vliev.SGgvtlenveeyaksgvdvisvgalthsv 161
                  vev++ ee++ +l+ +  +i + n +  +++  +e++++   +    + i + SG    ++ve+y k  v ++ vg +  ++
  KHJ32247.1 412 LVEVNTHEEMKTALKIGSKVIGVNNRNLINFEVDLETTNRLLDKvpegITICAlSGIKGAKDVEAYLKNRVSAVLVGEALMRA 494
                 69***********************987666665555544333345556666516655689***************9887766 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.00076
                 -HHHHHHHHHHHHHHSTT.SEEEEESS--TTTHHHHHCTT-SEEEEC CS
   QRPTase_C 110 sveelkkaveelkeknkr.vlievSGgvtlenveeyaksgvdvisvg 155
                 ++e++k+++ee  e +++ + + vS g++++ ++ +ak++  +is +
  KHJ32247.1 707 NPENVKDVIEEAAELAEKiIGVDVSSGIEENGIQSIAKIQ-AFISAS 752
                 68999999*999887777688*****************99.899876 PP

>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   1.3   3.1e-05     0.079     103     216 .]      95     202 ..      88     202 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.1e-05
  Peptidase_C26 103 ergvPilgiCrGlqllnvalGGtlyqdieeqsgltdhreheqsaashavkvekgsllaellgseeievnslHhqa..ikelaeelrveAv...... 190
                    + ++Pilg+C+G q +    GG++  + e       h       ++  ++ + +++++ + +   + v+ +H+ a   ++l e l+++++      
     KHJ32247.1  95 AGKIPILGVCLGQQCMIDLWGGDVSYAGEI-----FH------GKTSPLQHDGKGVYQGIPQ--GVLVTRYHSLAgtYQTLPECLEITSWvshngn 177
                    6689************88889987665552.....22......3345677777777777776..78888899887324568888888876222222 PP

  Peptidase_C26 191 .aeDgviEaieseeakafvlgvQwHPE 216
                     ++ g+i  ++++e  + + gvQ+HPE
     KHJ32247.1 178 dSKKGTIMGVRHKE--YLIEGVQFHPE 202
                    12356676666666..88999999998 PP

>> His_biosynth  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   8.7e-05      0.22     178     225 ..     444     493 ..     440     497 .. 0.88
   2 ?   -1.6   0.0       0.6   1.5e+03     188     211 ..     694     716 ..     662     747 .. 0.57

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 8.7e-05
                   --HHHHHHHHHHH..SSEEEEESS--SHHHHHHHHHTTCSEEEESHHHHT CS
  His_biosynth 178 pdleltkelaeav..kipviasGGvgsledlkelksegvdavivgsalye 225
                   +dle t++l ++v   i++ a  G++  +d+++  ++ v+av+vg+al  
    KHJ32247.1 444 VDLETTNRLLDKVpeGITICALSGIKGAKDVEAYLKNRVSAVLVGEALMR 493
                   6888999999999878999999***********************99975 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.6
                   HHHSSEEEEESS--SHHHHHHHHH CS
  His_biosynth 188 eavkipviasGGvgsledlkelks 211
                   +  +++v  +GG  ++e +k++ +
    KHJ32247.1 694 KDSSLRVFLAGGL-NPENVKDVIE 716
                   3334444444444.3333333322 PP

>> TMP-TENI  Thiamine monophosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.14   3.7e+02      87     121 ..     297     331 ..     295     332 .. 0.86
   2 ?    3.2   0.2      0.02        50      25     177 ..     380     545 ..     368     548 .. 0.63
   3 ?    6.2   0.0    0.0023       5.8     146     173 ..     693     720 ..     681     734 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.14
    TMP-TENI  87 aearellgpdliiGlSvhsleeaeeaealgadYig 121
                 ae+++  +++ +i lS++ +++a++ + +ga+ i 
  KHJ32247.1 297 AEIKRASPSKGLISLSINAPAQARAYALAGASVIS 331
                 57777888999**************9999998875 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.02
    TMP-TENI  25 ggvtlvqlRekeldarellelaeklaalcrkygvpliindrvdlalavgadgvHlgq.....ddlpvaearellg...pdlii.GlS.vhsleeaeeae 113
                 +g+++v l  k ld+++l+el +  + l  +  v++  +++++ al++g + + +        + ++++ ++ll+   ++  i  lS +++ +++e+  
  KHJ32247.1 380 AGADTVLLIVKMLDEKKLIELFQYSQSLGMEPLVEVNTHEEMKTALKIGSKVIGVNNrnlinFEVDLETTNRLLDkvpEGITIcALSgIKGAKDVEAYL 478
                 467888888888888888888888888888888888888888888888888887777333332224444444442000233221222134444466666 PP

    TMP-TENI 114 algadYigvGpifpTdtKkdaeplgleglkelaeale.iPv.vaiGGitlen.vaevleagadgvav 177
                 ++ ++ + vG     +  ++  ++gl + ++ +++++ iP+ + i G++ ++ +ae+++aga+ + +
  KHJ32247.1 479 KNRVSAVLVGEALMRAQNPETFVQGLFKESKPKKKTSqIPLlIKICGMRNAEvAAEAIKAGANLIGI 545
                 8888888888888888888888888866655555555577525688886655146788888887765 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0023
    TMP-TENI 146 aealeiPvvaiGGitlenvaevleagad 173
                 ++ +++ v+  GG+++env++v+e  a+
  KHJ32247.1 693 SKDSSLRVFLAGGLNPENVKDVIEEAAE 720
                 4556699****************87664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (756 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.45
# Mc/sec: 5037.90
//
Query:       KHJ32248.1  [L=1868]
Description: putative subunit of the nuclear pore complex npc [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.7e-136  454.3   3.4   3.8e-136  453.8   3.4    1.2  1  Nup188_C  Nuclear pore protein NUP188 C-terminal domain
    4.6e-69  233.4   1.4    1.3e-68  231.8   1.4    1.9  1  Nup188    Nucleoporin subcomplex protein binding to Pom34


Domain annotation for each model (and alignments):
>> Nup188_C  Nuclear pore protein NUP188 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  453.8   3.4  4.3e-140  3.8e-136       1     370 []    1472    1841 ..    1472    1841 .. 0.98

  Alignments for each domain:
  == domain 1  score: 453.8 bits;  conditional E-value: 4.3e-140
                  HHHHHHHHHCC-SSTT....STTTHHHHHHHHHHHHHHHHC-S------------.....-----HHHHHHHHHHHTHHHHHHHCT----------- CS
    Nup188_C    1 LLktvwetiraveedfeealaeedveyyrtLLkvLflalrahaeaeskaeeeasakkk..sesvsvlqivleilkkvvakgfrslvtliHdeeakvs 95  
                  LLk+vw t+++++ dfe+ + + ++ yyr+LLk+L+l++ +h++++  +ee+ s++++  se+ s l iv+ei+k+vv++g+ +++t+iH+ +a++s
  KHJ32248.1 1472 LLKVVWMTVCELRPDFERPIPDINLPYYRSLLKLLYLTICVHSDHKIMTEEDFSKTTTcfSENLSLLPIVIEIIKYVVSHGIGEIATSIHEPAAQSS 1568
                  89**********************************************99999998889999*********************************** PP

                  HHHHHHHHHHHHHHCCSCCCCCSHHHHHHHHHHTTCHHHHHHHHHHCCGG-TTSS-HHHHHHHHHHHHHCTSHHHHHHHHHCTHHHHHHCSCHHHHC CS
    Nup188_C   96 PeDlalltaiLqaclavpgieqlqeqilnilasndtvrvatsLfSWsdklavegDPvYGeLsilfLleLSslpalAEqlAvdgvLsqlssanltkyl 192 
                  PeDl+l+t+i+q cl++++i +++ qi++il+s++++++a++LfSWsd+la+e+DP+YGeLsil+LleLSs+p++AEqlA++g+L+q+ssa+++ y+
  KHJ32248.1 1569 PEDLVLVTGIFQLCLRISNIATSHPQIASILISDGAINTALRLFSWSDRLAIENDPIYGELSILYLLELSSIPIMAEQLAIEGFLTQISSASIMLYF 1665
                  ************************************************************************************************* PP

                  TSTT--SS-S-HCCHHHHHHHHCTHHHHHHHHHCCTTTSSHHHHHHHHCT-HHHHHCCCCTT-----------------B-SHHHHHHHHHHHHHHH CS
    Nup188_C  193 rrekvspfdeaavaqRlysiWakgiLPLlLNlLtavgatvApEvaafLnqFpelLkrsverleapeasrtssskeakkkitllaasEvhsLalltri 289 
                  ++ek++ f+++a ++R+ysiW++g+LPLlLN+L+++++++A Eva+fLnq+p+lL++s++ leap  +rt+ ++  k++itl+ +sEvhs+al+ +i
  KHJ32248.1 1666 KNEKLA-FATDALSRRCYSIWVRGLLPLLLNILDSLQQSIAIEVAQFLNQHPTLLRQSEKVLEAPLINRTM-NHGPKRYITLMSCSEVHSVALIIFI 1760
                  **9997.999999**********************************************************.88999******************** PP

                  HHHHHTT-..SS--------HHHHHHHHHHHHT-HHHHHHHB---SHHHHHHHHS---.SS-S-SSHHHHHHHHHHHHHHHHH CS
    Nup188_C  290 lealrevn..ardipevewdaasvkedvefwlssrklLrerlvplgerelelarkkaedesskaenrLeekvvaeleavrdvL 370 
                  l+++re+   + +ip+v+wd+++v+e+vefwl+sr++Lr+rl+p++ere+e+ + k+e  ss++ ++Leekv+a+l+ ++d+L
  KHJ32248.1 1761 LNRFRENMrgKMEIPSVNWDSSAVLESVEFWLGSRNMLRDRLLPTNEREAEMIKAKEE--SSETVCQLEEKVIAQLTGIKDIL 1841
                  ******765699********************************************99..9999*****************98 PP

>> Nup188  Nucleoporin subcomplex protein binding to Pom34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.8   1.4   1.5e-72   1.3e-68       2     924 ..      47    1165 ..      46    1167 .. 0.79

  Alignments for each domain:
  == domain 1  score: 231.8 bits;  conditional E-value: 1.5e-72
      Nup188    2 vdefLeknk..kkLlegl.pfkke.tssekknkktkelslrgily.niteknvedaeklsklLdldakeslrvisqtlkr................. 76  
                  v++fL++    ++L  +   f+ + +++ ++  k+ +ls   +++ ni  + ++d + lsk  +ld+  slr++   +                   
  KHJ32248.1   47 VKSFLNNEDvlDILSRPHsAFSPPsSETRESFDKKTALSTSFSSQyNI-REIKDDTLWLSKEANLDEITSLRIVLLECHArnstrllgpfseeevan 142 
                  777887543227888898899999444444444444444444444255.55677799****************998888889***********9999 PP

      Nup188   77 .......................ekrklkddlekvlenerlsl.......lasyilrERrsvLkvvlelln...........ylsstlhplskeiae 132 
                                         +     +     + +e           +++ +l+E+r  + ++ +ll+           +++++   +   +++
  KHJ32248.1  143 iqeaigknkfsnslslsflphglQ-----T----SIIQEHFEKlesrkqrIVKTYLSEKRFTWACADKLLQiffhqttyedlQCNEKGNIIPLWLKQ 230 
                  999999999999997777544432.....2....2222222223333446***********************999999988445544444444555 PP

      Nup188  133 fveklsskyisklisl........lqklieeltseeastkekneelseelqeliasenlleiiellkillllilnse.vpkee.vekwfkllketnr 219 
                    ++l++  +sk i++        +++ ++++ s +      +++  ee++  +++ ++ e +  +kil+ l+l    +p+++ v++w++ll++ + 
  KHJ32248.1  231 RAKDLGTLFLSKNIDTlilqhigaIRDRLQKMGSDSGFF---KQDGCEEIEIDWVQTQITEATLSMKILYHLLLHATeLPSSQvVLEWYQLLESYE- 323 
                  555555555555544410000000444444444444333...4566789********************98876666577766279**********. PP

      Nup188  220 rqefkhlldesesdeelvkriesletiislevLdL..........essidlksdd.....llndeevfkkinsvllnlssk..k.npiilyaWsiil 298 
                     f +l + +    +++  +++l+t+is+++L+           ++++ ++sd      ++ +++ +++++ ++l+  ++     ++ ++aWs++l
  KHJ32248.1  324 --FFDQLGSGDAFLGTSIIPLQALSTVISVVLLENldpitlsdnpDKQYLISSDHaedkpFILNPNSIATLHTIVLQAADSglItAGPAILAWSVLL 418 
                  ..888888888899999****************855776666666333333333377889***************996665225799********** PP

      Nup188  299 lrksilleeepee........................keskfikkvfskseissliarlasraek.lnVfeylkklse..ilkddslyaailssvit 368 
                   + s+ +++++e+                        ++ + i + +++s + +++  la ra +  +Vf  ++++s     ++d +++ i s++  
  KHJ32248.1  419 QAISFRVDNDKENapndeidsenlhhtfavpenhhgySQYESILQRIQSSVVGDVVDYLARRAVNvCHVFDIISEISDrlGGTNDAIFPEIGSQMRN 515 
                  *******99998899******************9999889999999999999999999****987369**********54447999*********** PP

      Nup188  369 aslnfi.sltee......................isdvikevlknapneivekFlen.eafekkliiarakfPlleesLlplikllsingefAn... 438 
                   +l +i +  +                       i++   + ++  p   + kFl++   +e+ l+i+  +fPl++ ++l++++ l++++ f +   
  KHJ32248.1  516 KLLLLIrKCVAMgyipeivcstisvlnggcgyweIVNSTPNFFTHSP---AVKFLNDdLLVEAFLRISQSRFPLESLPFLQIVRGLASSSFFIKpdh 609 
                  ******7777669*****99988888887777777777777777777...678888834578889******************************** PP

      Nup188  439 .....felkeLksYteklkknelddlydidde................ntdliklksellvkppfe.snkklslllpkgTkgkilpvakededlvtF 513 
                         l+ ++++t+ l  + +d  y++++e                ++    l s+      ++  + + ++++ +gT g i+  +++   +  +
  KHJ32248.1  610 hlsilRSLEVMPVFTHMLPIHFVD--YETTQEednnntviltriinlfESRYKNLGSDEKNFKSMSiLKVDQDFVIRAGTLGRII--SESGPRVACW 702 
                  **99999*********99999988..55555556776666655555553333333333222222222556789************..577778999* PP

      Nup188  514 lykYngWsllgrvLqnllkvys....sksasldeekveliidildlvtkvvs.....sdisvekskeileslSayv.ddsdIievifrlleqaLhnr 600 
                   ++Y+  + +g  L++ l + +    +++ s+++e v  ii+++ ++   +      s++ ve++ ++le  S+ + +++dIi vif+++e++L+n 
  KHJ32248.1  703 FHQYSALKYFGKLLETFLAASEqvdgTTGVSANYESVCEIIEVFAILIHCLGcsidvSQNGVENANQLLEIASSGLsRNRDIITVIFDIFEERLQNN 799 
                  ****************998777654555556999999999999998887764233337889999******9999886899**************986 PP

      Nup188  601 ........nvellvsclnlltalvpnfpqrvWsyLsksdLLprkgkeGlagtilgsiElvnGeYsftisllkLtktlvkesls.............. 675 
                          ++ ll sc+++++a+ p +p+rvW+ L+ks+LL  + +    +ti  siE+++G+++f +s   L k+l ++ ++              
  KHJ32248.1  800 ygrmgnnfPLPLLISCIHFIHAILPLYPYRVWPMLAKSGLLGVTKNGESLSTIVESIERPTGRFEFLLSCTYLFKSLLHDVTKnalrrktidqtsvn 896 
                  55566656899*******************************9999888999*****************9999999999877788889999999999 PP

      Nup188  676 ......lkndfpekskseiLsklifhlievfesfqkwrYnslkqrleigvllldvfskiLelvygi..............dkevepeekvtkvlssa 752 
                        +++  p++  ++iL  +   l+ev+e+   w+Y+   +r  + + +++ f++iLe +yg               +++++ +     vl  +
  KHJ32248.1  897 fsgaqnISTGSPDQFITKILLFFSKYLVEVLENSCIWKYQCDDDRRSLNYAITSSFQQILEYCYGLevptpstawetkipSSQIKEKLPLMGVLIPS 993 
                  88766666666777777777778889****************************************6665555554443333333333344566667 PP

      Nup188  753 aecilslfltedsv.vragqsllniiesgsdnlesielsdisgqlydqliqlslslanllisirsslnlspSplEkaLfsqspkLVdvyasyeslkk 848 
                  a+ ++++fl+  s+     q+ll+ + +g ++ e+ +  +  +++ ++ + ++ls++++l+ +   l+ +pS +Ek +f+ sp +  +y s  ++ +
  KHJ32248.1  994 AAFVVESFLSV-SCgNLRFQPLLQSFLNGLEYSEDSLFFQQ-SFMRKRHVISALSFSRTLLCVGAILERPPSQFEKLVFNSSPLIARLYCSDDDFSV 1088
                  88899999998.77777899998877777665444444333.48999************************************************** PP

      Nup188  849 diikLLtsLveapwedey..PSLLshLGeeaskalldsllsdLenkledyklkislyeFlsavmegkQdGLsilFltg 924 
                   +i+LL+sLv a  ++e+  PSLL hLG   ++ +l  +ls L+++l   + + ++  Fl  v+ ++Q+ +s  +ltg
  KHJ32248.1 1089 PVINLLESLVFAATSHEPepPSLLGHLGPYTARNFLR-VLSNLDKPLSRPENLNKVWHFLGIVVSSRQQWFSNYLLTG 1165
                  **********5555566567************99997.6789*******99999***************999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1868 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.03u 0.33s 00:00:01.36 Elapsed: 00:00:00.49
# Mc/sec: 11562.39
//
Query:       KHJ32249.1  [L=287]
Description: putative rho gtpase activator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-38  131.2   0.0    4.6e-38  130.4   0.0    1.3  1  RhoGAP    RhoGAP domain


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.4   0.0   2.6e-42   4.6e-38       1     149 [.      94     261 ..      94     264 .. 0.91

  Alignments for each domain:
  == domain 1  score: 130.4 bits;  conditional E-value: 2.6e-42
                 BHHHHHHHHHHHHHTTTSTTTTTS-S-HHHHHHHHHHHHHTGGGCT..TTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHH.HHTS..SSHHHH.. CS
      RhoGAP   1 PiivekcvefiekrgldtegiyRvsgskarvkelreafdkgkavds..dleeedvhavaslLKrfLrelpepLltkelyeelie.aaks..edeeer.. 92 
                 Pi+v+kc  ++++++ ++egi+R+sgs++r+kel+  fd+ ++  +  d+e ++vh+ a++L+r+L++lpep+++  ly+++ + +  +  e++ ++  
  KHJ32249.1  94 PIVVAKCGVYLKEKATTVEGIFRLSGSEKRIKELKTIFDSPDQYGKglDWEGYTVHDAANVLRRYLNQLPEPIVPLVLYDRFRApLKGHiiESRADEdg 192
                 9*******************************************999************************************6433333422222256 PP

                 ............HHHHHHHHTTS-HHHHHHHHHHHHHHHHHHHTHHHH---HHHHHHHHHHHHHT-TSS CS
      RhoGAP  93 ............lealkellekLPkenrdtLryLlehLkrvaenskenkMtaknLaivfaPtLlrpkse 149
                             ++ +++l+ ++P+ nr++L y+l++L  +a++++en+M+a+nL+ +f+P +++++s+
  KHJ32249.1 193 pilddtfdadlaISTYQQLITEMPPLNRQLLLYILDLLAVFASKADENRMNAQNLSAIFQPGIISHPSH 261
                 899999999999*****************************************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       304  (0.0169558); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2050.97
//
Query:       KHJ32250.1  [L=302]
Description: putative cdp-diacylglycerol-inositol 3-phosphatidyltransferase pis [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-11   44.6   0.1    1.8e-11   44.6   0.1    2.1  2  CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase


Domain annotation for each model (and alignments):
>> CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.1     1e-15   1.8e-11       3      66 .]      51     112 ..      49     112 .. 0.83
   2 ?   -1.5   0.7      0.25   4.5e+03      27      27 ..     181     181 ..     116     221 .. 0.62

  Alignments for each domain:
  == domain 1  score: 44.6 bits;  conditional E-value: 1e-15
                      HHHHHHHHHHHHHHHHHGGGS-H....HHHHHHHHHHHHHTTHHHHHHHHTT---HHHHHHHHHHH CS
  CDP-OH_P_transf   3 PnaiTllrlllsvlailllltyyp..lvlailllliasltDalDGklARrlnqvstlGkllDslaD 66 
                      Pn+i ++r++l+++++    +y+p    ++  l+ +++l+DalDG+ AR ++ ++++G++lD + D
       KHJ32250.1  51 PNVIGYARIVLAIASL----YYMPlhPRTCSGLYSVSCLLDALDGYAARFFEESTRFGAVLDMVTD 112
                      **********955444....455544688888999****************88666*******998 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.25
                      . CS
  CDP-OH_P_transf  27 l 27 
                      +
       KHJ32250.1 181 T 181
                      2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       390  (0.0217525); expected 358.6 (0.02)
Passed bias filter:                      282  (0.0157287); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 2104.54
//
Query:       KHJ32251.1  [L=356]
Description: putative stomatin family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-27   95.7   0.8    3.1e-27   95.7   0.8    1.5  2  Band_7    SPFH domain / Band 7 family
  ------ inclusion threshold ------
       0.03   14.0   0.1      0.049   13.3   0.1    1.4  1  Band_7_1  SPFH domain-Band 7 family


Domain annotation for each model (and alignments):
>> Band_7  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1      0.94   8.4e+03     144     167 ..      26      49 ..      19      59 .. 0.68
   2 !   95.7   0.8   3.4e-31   3.1e-27       2     177 ..      96     265 ..      95     266 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 0.94
      Band_7 144 itdidpppevaqalaakqaaeaea 167
                 ++++++ ++ ++++++ +++e++ 
  KHJ32251.1  26 LSNPRLQDQSRSNIQSIKTQEIQP 49 
                 566777777777777777777765 PP

  == domain 2  score: 95.7 bits;  conditional E-value: 3.4e-31
      Band_7   2 iieegevgvvvrfGklsrvlepGlhfilPfgrsvtvvsvrvqtldvsvsltvptkDglpvtidvtviyrvpddapklvaaveresanldnlirrvlesa 100
                 ++++g+vg+v+rfGk ++ ++pGl  ++P+ + ++ v+v++q ++v++ + ++tkD++ v ++++++y++ + + k+++ +     n+++ + + ++ +
  KHJ32251.1  96 SVPQGNVGLVTRFGKFHHAVDPGLIKVNPLSEHLIEVDVKIQIVEVPQ-QVCMTKDNVTVHLTSVIYYNI-TSPHKAAFGI----TNVRQALIERTQTT 188
                 69*********************999**********************.*********************.**********....************** PP

      Band_7 101 lrevisemtleellsnreelaeelknelneqlrkyGvevldvritdidpppevaqalaakqaaeaeaqaeiaraeae 177
                 lr+v++ + l++l++ reela+ +++ + + + ++Gv v++  i+di +++e++++l +++++ +  + +i  a+ae
  KHJ32251.1 189 LRHVVGARVLQDLIERREELAQSIEDIIEDVALGWGVHVESMLIKDIIFSNELQDSLSMAAQSKRIGESKIIAARAE 265
                 ***************************************************************99999999999998 PP

>> Band_7_1  SPFH domain-Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   5.5e-06     0.049     128     208 ..     172     250 ..     146     253 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 5.5e-06
    Band_7_1 128 fdteeiseqlkslivtrlsdvlaeskipvldlaakseelaeklkealkeelaeyGlelekleienislpeevekaldkras 208
                 f   ++ + l +  +t+l +v++     + dl  + eela+ +++ +++     G+++e++ i++i + +e++  l+ +a+
  KHJ32251.1 172 FGITNVRQALIERTQTTLRHVVGARV--LQDLIERREELAQSIEDIIEDVALGWGVHVESMLIKDIIFSNELQDSLSMAAQ 250
                 56666777777777777777776654..56999****************************************99987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       639  (0.0356406); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2684.57
//
Query:       KHJ32252.1  [L=89]
Description: putative mitochondrial import inner membrane translocase subunit tim9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-18   66.3   1.9    1.4e-18   66.3   1.9    1.5  1  zf-Tim10_DDP  Tim10/DDP family zinc finger


Domain annotation for each model (and alignments):
>> zf-Tim10_DDP  Tim10/DDP family zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.3   1.9   7.8e-23   1.4e-18       3      63 ..      15      75 ..      13      76 .. 0.96

  Alignments for each domain:
  == domain 1  score: 66.3 bits;  conditional E-value: 7.8e-23
  zf-Tim10_DDP  3 leqeqqvanaqelvnkltekCfkkCigkypgssLdsseesCldnCvdryldvsnlvskrlq 63
                   ++ +q+++++ ++++l+++Cf+ Ci++++ +sL ++e+ C+++Cv++++  s+++++r+ 
    KHJ32252.1 15 RMERKQMKEFMGMFSNLVSHCFDACIDDFTTKSLIQRETGCVNRCVQKFMAGSERIGQRFG 75
                  6899*******************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       745  (0.0415528); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 646.59
//
Query:       KHJ32253.1  [L=1040]
Description: putative gpi-anchored cell surface glycoprotein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0035   17.4   0.0      0.022   14.8   0.0    2.4  1  RcsF      RcsF lipoprotein


Domain annotation for each model (and alignments):
>> RcsF  RcsF lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.2e-06     0.022      12      64 ..     564     616 ..     551     622 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.2e-06
        RcsF  12 akkpakpkkakaaapvklykkaeeLlgkpFrdlGevsGesCrsslqdspasia 64 
                 +++ a+++k+ a+ +  l+++ ++L+++pF+ lG  +G++ ++sl++   +i+
  KHJ32253.1 564 STTNAQQTKSIASQSWGLVNSFKNLVSTPFKALGFGLGSNTQESLKNVTKDIN 616
                 334445555667777889**************************998877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1040 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1462  (0.0815439); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.77u 0.28s 00:00:01.05 Elapsed: 00:00:00.44
# Mc/sec: 7062.77
//
Query:       KHJ32254.1  [L=656]
Description: hypothetical protein EV44_g6466 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (656 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       745  (0.0415528); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4619.15
//
Query:       KHJ32255.1  [L=324]
Description: putative synaptobrevin protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-11   45.0   9.8    1.8e-11   44.2   9.8    1.2  1  Use1           Membrane fusion protein Use1
  ------ inclusion threshold ------
        7.3    7.2   8.4       0.98   10.0   1.6    2.3  2  Syntaxin-6_N   Syntaxin 6, N-terminal


Domain annotation for each model (and alignments):
>> Use1  Membrane fusion protein Use1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.2   9.8     2e-15   1.8e-11      12     244 ..      50     319 ..      48     320 .. 0.69

  Alignments for each domain:
  == domain 1  score: 44.2 bits;  conditional E-value: 2e-15
        Use1  12 rceelakeersenewrLekyvkaleemleeLkkessk...............pskevlkeYsekveaLkllleaeklssteekalanqllapg...... 89 
                 ++e+l +e++se  ++Le  +   e++l++L++ +                 ++ ++l ++s+++++L++l++++   s  e  l++  l+        
  KHJ32255.1  50 KTEALLRESKSE-RTKLESNLLYAEKLLAKLEQATPTnnglnkkydvqvelaQKRKALLKFSQQLKELNDLANYHDEGS-DEDHLEECSLSDAsceqnl 146
                 799999999999.******************998866788999999999998888899999999999999999999983.3333444444433465556 PP

        Use1  90 .........eeskeekeeskereeas.........kelrqkekakyqkelrkellgkndsssspekekeskkk..ksdedldavlkkhenlqEklaeem 168
                          e        s+ +++ s         +    ++   + +e +++l    +s++++  +++s+++  + + ++++++ +++  qE l++ +
  KHJ32255.1 147 ftqnkavehE--------SPVPSPNSnknimmaktPANLDQSIINSPSETQSNLRVRVKSERAEIFQSSSRSTgaDISSKAESLITHNRVEQEILTDSL 237
                 6433332221........222221112212222222222333333444555555555555544444444444488889999****************** PP

        Use1 169 lsLarnLKenslaasqiikkDtetlsksekaadqnlaslkkeserl.....eeh.skskvkcllwlllfvvlvvFismvlfi 244
                 l++a+ LK++s+a s+ + + + +l + ++  ++n   l+ ++ r+     + + +  + ++++   +f++ vv + +vl++
  KHJ32255.1 238 LQMAKMLKNSSQAFSSALEEEKDILRHATQGLEKNELGLEAAQRRIgllrtMTEgKGWWGRMIMYAWIFAMAVVALLIVLLM 319
                 *******************************************996222112221233335566777888888888888887 PP

>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.6   0.00011      0.98      14      96 ..      33     114 ..      27     117 .. 0.75
   2 ?    0.8   0.7     0.079   7.1e+02      36      72 ..     234     270 ..     191     290 .. 0.58

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00011
  Syntaxin-6_N  14 lnkaeslyrrwerlledtssstseeldetrteLrkalrsiewdledLeetvriveknpskfkidekelsrrrafveevreevk 96 
                   l+++ s +++   + ++++++   e+++ rt+L+++l  +e+ l  Le++  + +  ++k+ ++ +  ++r+a+++ + +++k
    KHJ32255.1  33 LSRMISRFHQIFITPDSKTEALLRESKSERTKLESNLLYAEKLLAKLEQATPTNNGLNKKYDVQVELAQKRKALLK-FSQQLK 114
                   455555566665555555556899***************************7777777889998776666666654.555555 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.079
  Syntaxin-6_N  36 seeldetrteLrkalrsiewdledLeetvriveknps 72 
                   +++l +  + L+++ +  +  le+ ++  r + +  +
    KHJ32255.1 234 TDSLLQMAKMLKNSSQAFSSALEEEKDILRHATQGLE 270
                   3334444444444444444444333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1579  (0.0880696); expected 358.6 (0.02)
Passed bias filter:                      619  (0.0345251); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2375.51
//
Query:       KHJ32256.1  [L=504]
Description: putative c2h2 transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00015   22.0   3.1      0.076   13.5   0.1    3.2  2  zf-C2H2    Zinc finger, C2H2 type
     0.0052   17.5   3.5        4.4    8.4   1.2    3.4  2  zf-C2H2_4  C2H2-type zinc finger
  ------ inclusion threshold ------
      0.041   13.6   5.3      0.082   12.6   5.3    1.5  1  CCDC106    Coiled-coil domain-containing protein 106


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.8    0.0011       6.5       1      23 []     317     343 ..     317     343 .. 0.95
   2 !   13.5   0.1   1.3e-05     0.076       3      23 .]     355     383 ..     353     383 .. 0.90

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0011
                 EEET..TTT.EEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCg.ksFkrksnLkrHirt.H 23 
                 y+C+   C+  sF++   L rH r  H
  KHJ32256.1 317 YQCKvaSCKgLSFSSTACLLRHEREaH 343
                 8999999*99**************988 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 1.3e-05
                 ET..TTT.....EEESSHHHHHHHHHC.C CS
     zf-C2H2   3 Cp..dCg.....ksFkrksnLkrHirt.H 23 
                 Cp  +C+     k F+r+ nL+ Hi++ H
  KHJ32256.1 355 CPfeGCDrgilgKGFPRRWNLRDHIKRvH 383
                 888889999999***************99 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   1.2   0.00074       4.4       1      24 []     317     343 ..     317     343 .. 0.92
   2 !    7.6   0.0    0.0013       7.7       3      24 .]     355     383 ..     353     383 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00074
   zf-C2H2_4   1 fkCpi..C.gksFsskkaLlrHlkthH 24 
                 ++C++  C g sFss   LlrH +  H
  KHJ32256.1 317 YQCKVasCkGLSFSSTACLLRHEREAH 343
                 89999********99999****99877 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0013
   zf-C2H2_4   3 Cpi..C.....gksFsskkaLlrHlkthH 24 
                 Cp+  C     gk F+++ +L++H+k++H
  KHJ32256.1 355 CPFegCdrgilGKGFPRRWNLRDHIKRVH 383
                 55555666666899**************9 PP

>> CCDC106  Coiled-coil domain-containing protein 106
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   5.3   1.4e-05     0.082      67     142 ..     383     463 ..     373     480 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.4e-05
     CCDC106  67 ksesessssseesd.dsssdssessessegsstekkkkkkkkkekkkkkktkkrerkrvkdvddvliRykk....vLttfq 142
                  ++++sss + +++ +ss++ss+s+ s++++ t+++k+ +k + +  +k +   ++ +       + Ryk+     L+t++
  KHJ32256.1 383 HKDPISSSTQTSENsESSTESSVSGISESTNCTKRRKRGTKYSAQLTFKAASGSSIVKKPKKSILIKRYKQkqllLLETVK 463
                 4455554444444404455588899888888777777777557777777776666655555555689**974333344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (504 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       916  (0.0510904); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3677.63
//
Query:       KHJ32257.1  [L=684]
Description: hypothetical protein EV44_g5383 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.9e-10   40.1  10.8      6e-10   39.1  10.8    1.6  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
    3.8e-08   32.7   0.1      2e-07   30.3   0.0    2.0  2  Fungal_trans  Fungal specific transcription factor domain
     0.0088   15.9   1.0       0.16   11.9   0.0    2.6  3  YidD          Putative membrane protein insertion efficiency 


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1  10.8     1e-13     6e-10       2      40 .]      17      53 ..      16      53 .. 0.96

  Alignments for each domain:
  == domain 1  score: 39.1 bits;  conditional E-value: 1e-13
                S-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCCCEE CS
     Zn_clus  2 aCdnCrkkKvKCdakkPaCsnCkklnleCtfysesskrs 40
                aCd+C+++Kv+Cd+++P C+ C +++++C+ y+ ss+rs
  KHJ32257.1 17 ACDSCKQRKVRCDGETP-CAACHRSSTTCR-YQLSSTRS 53
                9****************.************.****9986 PP

>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.0   3.3e-11     2e-07      31     183 ..     306     449 ..     286     466 .. 0.84
   2 ?   -2.1   0.0      0.25   1.5e+03      27      59 ..     497     529 ..     484     563 .. 0.75

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 3.3e-11
  Fungal_trans  31 ksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsLlllelyektssdralherhhgvavrlarsl 127
                   +  +++  l++a+la+G++ ++ e+  + ++  +e    + f++ ae  ++++f ++ s+ + l +L+++ +  k+  dr+     + +  ++a  l
    KHJ32257.1 306 SRIEYHVTLIYAVLAIGCYIVKVEQEGDVKQGLEE---AYGFFQVAEESQSTNFGTEISRENFLATLVMILFARKCGRDREISL--LTTLSSIAIGL 397
                   6677899*********************9999995...5999***********************************9976654..44444566777 PP

  Fungal_trans 128 gLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinl 183
                   +L   +s ++ +     +e  + ++ R +w  + ++k +al  G  +++dds i+ 
    KHJ32257.1 398 KLYSLKSIENLS----DTEQSKIELQRAFWLYYAIEKPHALRIGQFSMIDDSFIDY 449
                   777777776633....555667779**********************99***9985 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.25
  Fungal_trans  27 enssksayaspllllailalGalfsesetkesn 59 
                    +++  +++++ l ++i++lG  +++  +++  
    KHJ32257.1 497 YTPHGLQKTPSELYNSIFQLGGMLKHWKDSIHA 529
                   567788999999999999999988887777654 PP

>> YidD  Putative membrane protein insertion efficiency factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.3       2.5   1.5e+04      20      25 ..      42      47 ..      37      57 .. 0.73
   2 !   11.9   0.0   2.7e-05      0.16      11      43 ..     470     504 ..     462     509 .. 0.79
   3 ?    1.8   0.0     0.037   2.2e+02      34      62 ..     553     581 ..     538     584 .. 0.83

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 2.5
        YidD 20 ksCrfy 25
                ++Cr++
  KHJ32257.1 42 TTCRYQ 47
                479996 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 2.7e-05
        YidD  11 Yqkvisp..llksCrfyptCSeYaleaiekyGllk 43 
                 Y+ + +   ll +Crf +tCS  + + ++ +Gl k
  KHJ32257.1 470 YRDTGQEdlLLLQCRFAKTCSLITTKLYTPHGLQK 504
                 6666655532269*********9999999999865 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.037
        YidD  34 eaiekyGllkGlllalkRilrCnplskgG 62 
                 + +  y   ++l+    R   Cnp + + 
  KHJ32257.1 553 QLVLSYQYYEALWAIHGRWRLCNPSHMSD 581
                 5667788999**************88765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (684 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.39
# Mc/sec: 5247.85
//
Query:       KHJ32258.1  [L=118]
Description: hypothetical protein EV44_g0261 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.1e-21   74.9   0.0    7.6e-21   74.9   0.0    1.0  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.0   4.2e-25   7.6e-21      62     179 ..       3     116 ..       1     118 [] 0.92

  Alignments for each domain:
  == domain 1  score: 74.9 bits;  conditional E-value: 4.2e-25
       RVT_2  62 svrLllalaaeeelvvhqldvdsafLnaeldeevyvkqPpGfeidreeekvykLnkslyGlkqapllWnekidkvLkklgferseaesGlyvrgtgegk 160
                 ++r +l++ a e+l  +q+d++ af ++e++e v++k+P G ++   ++k  ++ +slyGlkq+++ Wn+ +++ L   gf +s a   l++ +  e  
  KHJ32258.1   3 TLRAFLSIVAAEDLECWQFDIKNAFTESEMKEIVFLKPPKGVNVT--KGKSLRVLRSLYGLKQSARDWNQLLHSQLLSWGFIQSLADPCLFTYK--EKC 97 
                 57899**************************************99..99******************************************877..555 PP

       RVT_2 161 livalyvddlliagsdiki 179
                 l+  +yvdd+ ++g++   
  KHJ32258.1  98 LVALVYVDDIAVSGKNLDN 116
                 66668**********9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       368  (0.0205254); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.21s 00:00:00.56 Elapsed: 00:00:00.35
# Mc/sec: 1012.47
//
Query:       KHJ32259.1  [L=376]
Description: putative pyruvate dehydrogenase e1 component beta subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.4e-47  159.1   0.0    1.2e-46  158.6   0.0    1.3  1  Transket_pyr     Transketolase, pyrimidine binding domain
    7.9e-34  116.2   0.1    2.1e-33  114.8   0.1    1.8  1  Transketolase_C  Transketolase, C-terminal domain
  ------ inclusion threshold ------
      0.063   12.2   0.0      0.092   11.7   0.0    1.1  1  Glyco_hydro_30   Glycosyl hydrolase family 30 TIM-barrel doma


Domain annotation for each model (and alignments):
>> Transket_pyr  Transketolase, pyrimidine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.6   0.0   2.1e-50   1.2e-46       2     176 ..      49     224 ..      48     226 .. 0.98

  Alignments for each domain:
  == domain 1  score: 158.6 bits;  conditional E-value: 2.1e-50
                   EEEHHHHHHHHHHHHHCTTTTEEEEESSTH..HHHTTCHCCHHEGGTTEGEEE--S-HHHHHHHHHHHHHHCTTEEEEEEEEHHHHGGG..HHGGHH CS
  Transket_pyr   2 kiawrkaeaealaellkedpevvligaDva..ggtfsvrkgllhdqgegrvidsgisEqavlgfavGaalagpllviveaqFgdFangA..qiyadq 94 
                   + ++r+a++ealae+l+++p+v+++g++va  +g ++v+kgl++ +g++rv+ds+i+E++++g  vGaalag l +++e++ ++Fa++A  qi++++
    KHJ32259.1  49 QYTVRDALNEALAEELEQNPNVFILGEEVAqyNGAYKVTKGLWDRFGDKRVVDSPITESGFCGLTVGAALAG-LQPVCEFMTFNFAMQAidQIVNSA 144
                   6789**************************99****************************************.9*********************** PP

                   HHHCHHHHHT--EEEEESBSGGGSTTGTTTSBSSHHHHHHTSTTEEEE--SSHHHHHHHHHHHHHSSS.SEEEEEE-SSEEC CS
  Transket_pyr  95 airsgeakgklkvgvvtrlpigvgedGpehqsaeleaflrlipglkvvrPsdpaetkhllrrairredrkPvvlrlpksllr 176
                   a+++++++g +++++++r p g+    ++++s+   a++ +ipglkvv P +++++k+ll++air  d++Pv++++++ l+ 
    KHJ32259.1 145 AKTHYMSGGIQPCNITFRGPNGFAAGVAAQHSQDYSAWYGSIPGLKVVSPWSAEDAKGLLKAAIR--DPNPVCVLENELLYG 224
                   *****************************************************************..99********99986 PP

>> Transketolase_C  Transketolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.8   0.1   3.5e-37   2.1e-33       1     122 [.     243     364 ..     243     366 .. 0.97

  Alignments for each domain:
  == domain 1  score: 114.8 bits;  conditional E-value: 3.5e-37
                      TEEEEEETTSSEEEEEETTHHHHHHHHHHHHHTT.TTCEEEEE-SEEESHHHHHHHHHHHHHSEEEEEEEEESTTSHHHHHHHHHHHCCCTTCS CS
  Transketolase_C   1 gkaeilregkdvtlvayGsmveealeAaeeLeke.gisaeVvdlrtvkplDketilesvkktgrlvvveeavkrgGigsevaaalaeeafdgld 93 
                      gka+++r gkd+t+va ++ v ++l Aa++L+++ g+++eV++lr++kplD + i +svkkt++l+ ve + + +G+g+e++a+ +e afd+ld
       KHJ32259.1 243 GKAKVERVGKDLTIVALSRCVGQSLVAAKALSEKyGVECEVINLRSIKPLDVQAIVKSVKKTHKLIAVESGFPAFGVGAEILALTMEYAFDYLD 336
                      89******************************999*********************************************************** PP

                      SEEEEEEE-SSSSSSGHHHHHHHTT-SHH CS
  Transketolase_C  94 apvkrvggpdviepgsaeelekafgldae 122
                       p +r++g dv++p++ + le+   ++ +
       KHJ32259.1 337 LPAQRITGADVPTPYA-KCLEDISFPNEN 364
                      ***************9.889998888766 PP

>> Glyco_hydro_30  Glycosyl hydrolase family 30 TIM-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.5e-05     0.092     222     283 ..      36      96 ..      21     106 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.5e-05
                     HHHHTTEEEEEEEETTT.S-HHHHHHHHHHHSTTSEEEEEEEESS-STTS-SS-TT-HHHHHH CS
  Glyco_hydro_30 222 kdaakyvsGiavhayqd.aeadkhldethkkfpnvlllgteaseGskskdqsvdyGsfdraad 283
                     ++  +y +  av++y   +  ++ l e  ++ pnv++lg e ++  ++ +  v  G +dr  d
      KHJ32259.1  36 TQFRSYAKESAVKQYTVrDALNEALAEELEQNPNVFILGEEVAQYNGAYK--VTKGLWDRFGD 96 
                     5667899999*****984666889*******************9999988..9******9655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2860.61
//
Query:       KHJ32260.1  [L=360]
Description: putative autophagy-related protein 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-42  144.8   0.1      3e-42  143.8   0.0    1.5  2  Autophagy_N      Autophagocytosis associated protein (Atg3), 
    5.7e-16   57.7   0.6      1e-15   56.9   0.6    1.4  1  Autophagy_C      Autophagocytosis associated protein C-termin
      3e-12   46.9   0.2    5.3e-12   46.1   0.2    1.4  1  Autophagy_act_C  Autophagocytosis associated protein, active-


Domain annotation for each model (and alignments):
>> Autophagy_N  Autophagocytosis associated protein (Atg3), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.8   0.0     5e-46     3e-42       2     136 ..       5     155 ..       4     161 .. 0.83
   2 ?   -3.1   0.1       1.2   7.1e+03     100     100 ..     282     282 ..     250     323 .. 0.56

  Alignments for each domain:
  == domain 1  score: 143.8 bits;  conditional E-value: 5e-46
                  ..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX................. CS
  Autophagy_N   2 kstlssvreyltpvlkeSkFretGvitpeeFvaAGDyLvhkfptWsWasa.eeskrksyLPkdKqfLvtrnVpcykRakql.eeekeeeeeiie.... 93 
                  ++tl +vre  +pv+++S+Fr++G+itp eF+aAGDyLv+kfptWsWa+a + skr syLP++KqfLvtr+Vpcy+R+++   +++  +e+i+     
   KHJ32260.1   5 HTTLDKVRE-WAPVSHTSTFRSNGQITPAEFIAAGDYLVYKFPTWSWADAsPASKRASYLPPGKQFLVTRGVPCYRRIDENfAGDAGLDEAIVGdggl 101
                  677888887.79**************************************8999*************************9963333344444446777 PP

                  ......XXX---B----XX......XXXXXXXXXXXXXXXXXXX......XXXXXXX CS
  Autophagy_N  94 ......dedegwvkthkeekeee..eeevkdideeekeeeeeee......eeedeed 136
                        d+++gw++t++ ++++e   ++v+++de+ +  e+e e      +   +ed
   KHJ32260.1 102 tcanagDDEDGWLRTGGLSSSQEvrVKDVRTVDESGNIGEREIEddddipD---MED 155
                  7788999*********99877778899999999999998888776674442...333 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.2
                  B CS
  Autophagy_N 100 v 100
                  +
   KHJ32260.1 282 I 282
                  2 PP

>> Autophagy_C  Autophagocytosis associated protein C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.9   0.6   1.7e-19     1e-15       1      25 []     334     358 ..     334     358 .. 0.99

  Alignments for each domain:
  == domain 1  score: 56.9 bits;  conditional E-value: 1.7e-19
  Autophagy_C   1 VdqYLviFLKFisSViPTIEyDyTm 25 
                  VdqYLv+FLKF++SV+P+IE+D+Tm
   KHJ32260.1 334 VDQYLVVFLKFMASVTPGIEHDFTM 358
                  9***********************9 PP

>> Autophagy_act_C  Autophagocytosis associated protein, active-site domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.1   0.2   8.9e-16   5.3e-12       1      55 []     183     245 ..     183     245 .. 0.93

  Alignments for each domain:
  == domain 1  score: 46.1 bits;  conditional E-value: 8.9e-16
  Autophagy_act_C   1 ItYsktYqvPvlyfrlydedgtplsleelyed....sad..vtieehpl..lgvpwysiHPCk 55 
                      I Y ++Y++P+l++++y  + +pl++  ++ed    ++d  vt+e +p    +++++siHPCk
       KHJ32260.1 183 IAYAPYYRTPRLFLQGYLANSQPLPPRLMMEDiigeYKDktVTLEYFPYfsKNIQMASIHPCK 245
                      89*********************************977778********5556*********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2684.33
//
Query:       KHJ32261.1  [L=436]
Description: putative transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-24   86.2   0.0    2.3e-24   85.3   0.0    1.5  1  RPAP1_C   RPAP1-like, C-terminal
    6.2e-17   61.1   9.8    1.2e-16   60.1   9.8    1.5  1  RPAP1_N   RPAP1-like, N-terminal
  ------ inclusion threshold ------
       0.17   10.9   2.9       0.26   10.4   2.9    1.2  1  Gcd10p    Gcd10p family


Domain annotation for each model (and alignments):
>> RPAP1_C  RPAP1-like, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.3   0.0   3.9e-28   2.3e-24       1      66 [.     308     375 ..     308     376 .. 0.97

  Alignments for each domain:
  == domain 1  score: 85.3 bits;  conditional E-value: 3.9e-28
     RPAP1_C   1 slRFdfdGdlvpl..adelethrgLhhHgdepalaGYTlkElfqLarSavpsQralalqtLgrilekl 66 
                 slRF+f+G ++p+  a+ +++++gLhhH++ p++aGYT++El++L+rSa+p+Qr++a qt+gr+l++l
  KHJ32261.1 308 SLRFNFRGGILPPriARAVPVTKGLHHHAEAPEAAGYTIPELAHLSRSAYPAQRCIAYQTIGRLLYRL 375
                 69***********999*************************************************997 PP

>> RPAP1_N  RPAP1-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.1   9.8   2.1e-20   1.2e-16       2      46 .]     112     156 ..     111     156 .. 0.96

  Alignments for each domain:
  == domain 1  score: 60.1 bits;  conditional E-value: 2.1e-20
     RPAP1_N   2 rIdeENrarLasMspeEIeeereeLlesLdPkllefLlkRankke 46 
                  IdeEN++rL+ M+ +EIeeer+e+l++LdP+l+e+LlkRan +e
  KHJ32261.1 112 IIDEENQKRLSMMTSDEIEEERREILSQLDPSLIEKLLKRANLDE 156
                 5*****************************************986 PP

>> Gcd10p  Gcd10p family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.9   4.3e-05      0.26      70     132 ..      82     151 ..      60     156 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 4.3e-05
      Gcd10p  70 aeleaeslaeeeaeeeeeeee...arsnreiiddgarQkL...tkeeIeeLKkegtsa.gkeiIaklles 132
                 ++ e+ +++++e++++e++++   + + r+iid++++ +L   t++eIee ++e  s+    +I+kll++
  KHJ32261.1  82 SKYEQGTFNTSEKASREAKSRvhfSSTERQIIDEENQKRLsmmTSDEIEEERREILSQlDPSLIEKLLKR 151
                 4445555666655555554448899********8887665112679********88888999*****986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       617  (0.0344135); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 3359.86
//
Query:       KHJ32262.1  [L=399]
Description: putative asparaginyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.5e-76  256.8   0.0    2.9e-76  256.5   0.0    1.0  1  tRNA-synt_2   tRNA synthetases class II (D, K and N)
  ------ inclusion threshold ------
       0.12   11.8   0.0       0.99    8.8   0.0    2.0  2  tRNA-synt_2d  tRNA synthetases class II core domain (F)


Domain annotation for each model (and alignments):
>> tRNA-synt_2  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  256.5   0.0   3.3e-80   2.9e-76       3     313 ..      38     393 ..      36     394 .. 0.92

  Alignments for each domain:
  == domain 1  score: 256.5 bits;  conditional E-value: 3.3e-80
                  CHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHTT-EE----SEESS--SSSS--EEEEETTT.T......EEE....-E-S-SHHHHHHHHHCT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxx....xxxxxxxxxxxxxxxxx RF
  tRNA-synt_2   3 elrlknryldlrtekvskvlrlrstvtkavrkyleengfieietPiLsksdteegarlFkvksrekek......eff....aLtqspqlylellivag 90 
                  e+++   +l++r +   + lrlrs+v++++ k l++ +f++ +tP++++sd+e++++ F+v   +k++       ff    +Lt+s+ql+le+l+ a 
   KHJ32262.1  38 EFLRSMPHLRVRIPFNTALLRLRSKVIAIITKSLSDMEFVQTHTPVITSSDCEGAGEVFQVDLATKQEsknegqCFFrspkYLTVSSQLHLEALAHA- 134
                  6678889******************************************************9998833445676677********************. PP

                  HSEEEEEEEEE--S--BTTB-S-CEEEEEEEEET-SCHH.HHHHHHHHHHHHHHHHHHCSCCCCCHTTTTTS.........EE-SSS-EEEEHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxx RF
  tRNA-synt_2  91 idrvfqiaraFRaEdsrtdrhlaEFtqieaemsfieeed.imqvleelikslvkevlessakdiefvirrns.........kdlkkpfkrltykeaie 178
                  +++v++++++FRaE+s+t+rhl+EF+++eaem+f++  + +m++++ +   +++++ +s+++++     +             +++ +k +ty+eai+
   KHJ32262.1 135 LGNVWTLSPTFRAEKSDTSRHLSEFYMLEAEMNFVNSMHeVMSIIQIITAAVIRDLYDSQTGNVILSRGPLGeqelrqrwdGLMQERWKCITYTEAIK 232
                  ***********************************98888****************8888766655554444888999996667777*********** PP

                  HHHTS..........-SS--HHHHHHHHH......HS--SEEEEEEEBGGGSTTCBBBSTTS...TTBBSEEEEEETTE.EEEEEEEB--SHHHHHHH CS
                  xxxxx..........xxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 179 klnei..........gkdldkaderalvk......keknepvfvtdfPaelkpFyarkeedd...kkltesyDllingv.ElvgGslRiedpeeleek 256
                  +l++           g  l+ ++er+l++      ++  +p+fvt++P+++kpFy+  +e      +++e +D+l+++v El+gGs+R+++ e l ++
   KHJ32262.1 233 ILQSSshtfkyepkwGSSLQAEHERYLTRalgttnSNCISPIFVTHYPKAVKPFYMLPSEPTkvgLETVECFDVLVPDVgELAGGSMREHRLEPLLNS 330
                  *99999*********999*********9999998878889****************99888867789**************************99999 PP

                  HHHCCHH......SSSGGGGHHHHHHHHCT--SEEEEEEEHHHHHHHHCT-SSGGGCSSS-XX CS
                  xxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 257 lkskgld......eeaeekfswylealeyGapphgGlglGldRlvmlllgsesIrdviaFPkl 313
                  +  +gl       +++   ++wy+e++++G++phgG+glG+dRl+ +l g ++Ir+v+ FP++
   KHJ32262.1 331 MFINGLIpnlapsDQELRDLKWYVELRKWGSVPHGGFGLGFDRLLSYLSGVPNIREVVTFPRW 393
                  999998889999999999********************************************9 PP

>> tRNA-synt_2d  tRNA synthetases class II core domain (F)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0     0.043   3.8e+02     109     129 ..     143     164 ..     120     195 .. 0.72
   2 ?    8.8   0.0   0.00011      0.99     211     236 ..     364     389 ..     356     396 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.043
                   EEEBSST-S.SSB-SEEEEEEE CS
  tRNA-synt_2d 109 rvfRrdavD.athlaeFhqveg 129
                    +fR ++ D ++hl eF+ +e 
    KHJ32262.1 143 PTFRAEKSDtSRHLSEFYMLEA 164
                   589*999662579999998775 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00011
                   EEEEEEEHHHHHHHHHT-SSGHHHHT CS
  tRNA-synt_2d 211 gfafGlGveRlamlkygieDiRelve 236
                     +fGlG++Rl     g+++iRe+v+
    KHJ32262.1 364 HGGFGLGFDRLLSYLSGVPNIREVVT 389
                   568*******************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 3251.80
//
Query:       KHJ32263.1  [L=297]
Description: hypothetical protein EV44_g3352 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-05   25.1   0.0    3.1e-05   24.4   0.0    1.4  1  DUF2263   Uncharacterized protein conserved in bacteria (DUF2


Domain annotation for each model (and alignments):
>> DUF2263  Uncharacterized protein conserved in bacteria (DUF2263)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   1.7e-09   3.1e-05      76     115 ..      86     125 ..      13     136 .. 0.88

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 1.7e-09
                 --EEEEE--SSSTTTTGGGT--SHHHHHHHHBSHHHHHTT CS
     DUF2263  76 kvavLNfASaknpGGGflnGakAQEEsLarsSaLyasllk 115
                  + v+  A++k+pGG ++n  +  EE+L+r+S+L  +l +
  KHJ32263.1  86 PIPVIMPANEKRPGGDWENSVMLPEECLCRRSNLSVTLAT 125
                 5557777***************************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       260  (0.0145016); expected 358.6 (0.02)
Passed bias filter:                      235  (0.0131073); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2213.90
//
Query:       KHJ32264.1  [L=321]
Description: putative trna 2 -phosphotransferase 1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.3e-21   75.2   0.0    8.7e-21   74.8   0.0    1.2  1  PTS_2-RNA  RNA 2'-phosphotransferase, Tpt1 / KptA family
  ------ inclusion threshold ------
      0.045   13.6   0.0      0.077   12.8   0.0    1.3  1  VEFS-Box   VEFS-Box of polycomb protein


Domain annotation for each model (and alignments):
>> PTS_2-RNA  RNA 2'-phosphotransferase, Tpt1 / KptA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.8   0.0   9.7e-25   8.7e-21       2     181 .]      55     248 ..      54     248 .. 0.85

  Alignments for each domain:
  == domain 1  score: 74.8 bits;  conditional E-value: 9.7e-25
   PTS_2-RNA   2 revqlskaLsyiLRhgaek..egLkiredGyvkvedlLelpklkslkvtleeikevVesndKqRFelv.el..........eelliranqghsikkves 87 
                 re  +sk+L++iL+h+ +    + +  +dG++++ed+L+++++ +l+ tl+e+++  ++++K +F+++ ++          +++lir n   +++++++
  KHJ32264.1  55 REWLISKTLARILKHNVDAdqDEDQDGNDGWANCEDILAHSEILALEGTLSELETF-SNSPKPKFTVKlKPgitvsedhvsSDYLIRINHLPTTATTNT 152
                 66789**********9765325667789*************************876.888******77666*********744**********977788 PP

   PTS_2-RNA  88 selllepi.esaeelpevvvHgTylkawesilasggLkrm.srnhihlatglpgekevisgmrksaevliyidvekaladg..ikfyvsengviLteG 181
                 ++++l p+  s+++lp++v+++T++++++ ilasgg+kr+ ++ ++ + +      + +     sa+v iyid+  a++++  i + ++e gvi+teG
  KHJ32264.1 153 ANSMLIPLnGSTSDLPKLVIYETSYANYPLILASGGIKRAgGQPYLSFKAISL--IGETELPPVSADVSIYIDLPLAIEANqtILWQRTESGVIITEG 248
                 89999999867778**************************6777888877542..23334444589************6554599************9 PP

>> VEFS-Box  VEFS-Box of polycomb protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   8.6e-06     0.077      10      54 ..      47      91 ..      40     100 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 8.6e-06
    VEFS-Box 10 rslillhkRqfyhsetlqplsleevdsdeDsedevDdealrlker 54
                r +  + +R++  s+tl+ +  ++vd+d+D +++ +d +++ ++ 
  KHJ32264.1 47 RGYSIVDEREWLISKTLARILKHNVDADQDEDQDGNDGWANCEDI 91
                66777899********************************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2420.50
//
Query:       KHJ32265.1  [L=169]
Description: hypothetical protein EV44_g0378 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.099   11.8   0.4       0.11   11.6   0.4    1.1  1  Zip          ZIP Zinc transporter
        2.8    7.6   6.6        3.5    7.3   6.6    1.1  1  tRNA_bind_2  Possible tRNA binding domain


Domain annotation for each model (and alignments):
>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.4   1.3e-05      0.11      76     175 ..      52     154 ..      18     165 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.3e-05
         Zip  76 plagllvllGflllllveklltmivek........ksshkektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksese 166
                 p   +++l+G+ ++ + + l   i++          +s++e++p     ++++ + ++ v + k+++ ++ e+ +++++  ++sk+e+ + ++  ++s+
  KHJ32265.1  52 PRFAGAILGGLATTVVGNALGGAISPVfqkigekmGGSNNEPEPVI---EEEQTEEEEPVAKTKISKAQKVEETETSTKLGNTSKSEKLEISEAGEKST 147
                 5555556666555555555555555555555533322233333333...33344444444455555555556666677788888888888888888888 PP

         Zip 167 keqaseeed 175
                 k+q+s  ++
  KHJ32265.1 148 KSQKS--KE 154
                 88865..33 PP

>> tRNA_bind_2  Possible tRNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   6.6   0.00039       3.5     153     215 ..      97     159 ..      77     167 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00039
                  HHHHHHHH-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  tRNA_bind_2 153 ilekaieeelpkekeeekaaeaeeeeakekelkpleesleeeLeeaakeveeklkekqrelid 215
                  i+e++ eee p +k++ ++a++ ee++++++l ++++s + e++ea+++ ++++k+k+ e ++
   KHJ32265.1  97 IEEEQTEEEEPVAKTKISKAQKVEETETSTKLGNTSKSEKLEISEAGEKSTKSQKSKELEDLE 159
                  5667777777777776677788888888999**********************9988766554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1469  (0.0819343); expected 358.6 (0.02)
Passed bias filter:                      574  (0.0320152); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 1264.11
//
Query:       KHJ32266.1  [L=336]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       765  (0.0426683); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2428.60
//
Query:       KHJ32267.1  [L=426]
Description: putative geranylgeranyl transferase type-1 subunit beta [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-37  127.5   7.5    1.2e-07   31.3   0.0    6.8  6  Prenyltrans      Prenyltransferase and squalene oxidase repea
     0.0045   16.1   0.0      0.033   13.3   0.0    2.2  2  SQHop_cyclase_C  Squalene-hopene cyclase C-terminal domain


Domain annotation for each model (and alignments):
>> Prenyltrans  Prenyltransferase and squalene oxidase repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.0   4.1e-11   3.7e-07       5      40 ..      62     117 ..      60     121 .. 0.82
   2 !   16.1   1.4   7.5e-07    0.0067       5      23 ..     130     148 ..     126     170 .. 0.68
   3 !   31.3   0.0   1.4e-11   1.2e-07       1      44 []     185     228 ..     185     228 .. 0.98
   4 ?   -1.4   0.0      0.22     2e+03       3      14 ..     247     258 ..     245     259 .. 0.82
   5 !   15.7   0.0     1e-06    0.0091      19      39 ..     304     324 ..     304     328 .. 0.90
   6 !   30.1   0.0   3.3e-11     3e-07       2      42 ..     337     378 ..     336     378 .. 0.94

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 4.1e-11
                  HHHHHHHHHSHTTS-BBSSTTS....................SBBHHHHHHHHHHH CS
  Prenyltrans   5 kavefLlscQnedGGwggrpgs....................esdtyytywalaaL 40 
                  ++++++l+cQ++ GG++g+p++                    ++ + +ty+a+++L
   KHJ32267.1  62 EIRDWILKCQHPNGGFCGSPNHrfpeeyyldlsvdgnksevdPANLPATYFAILSL 117
                  689*******************9988888888888888877777777777777776 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 7.5e-07
                  HHHHHHHHHSHTTS-BBSS CS
  Prenyltrans   5 kavefLlscQnedGGwggr 23 
                  k++++L++ Q+edG++g+ 
   KHJ32267.1 130 KCLRWLKKLQREDGSFGEL 148
                  789*************984 PP

  == domain 3  score: 31.3 bits;  conditional E-value: 1.4e-11
                  HHHHHHHHHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHHHHCT CS
  Prenyltrans   1 idvekavefLlscQnedGGwggrpgsesdtyytywalaaLallG 44 
                  i+ve +v+ +ls Q +dGG ++   +e++++yty+++a+L+llG
   KHJ32267.1 185 INVENLVQHVLSGQTYDGGISETSQHEAHAGYTYCGIATLSLLG 228
                  799****************************************8 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 0.22
                  HHHHHHHHHHHS CS
  Prenyltrans   3 vekavefLlscQ 14 
                  + + +++L s+Q
   KHJ32267.1 247 FSETLRWLVSRQ 258
                  56779******9 PP

  == domain 5  score: 15.7 bits;  conditional E-value: 1e-06
                  -BBSSTTSSBBHHHHHHHHHH CS
  Prenyltrans  19 Gwggrpgsesdtyytywalaa 39 
                  G++gr+++++dt+y +w++ +
   KHJ32267.1 304 GFNGRCNKRVDTCYVFWVIGS 324
                  9****************9976 PP

  == domain 6  score: 30.1 bits;  conditional E-value: 3.3e-11
                  HHHHHHHHHHHHSH.TTS-BBSSTTSSBBHHHHHHHHHHHHH CS
  Prenyltrans   2 dvekavefLlscQn.edGGwggrpgsesdtyytywalaaLal 42 
                  d+  a++fL+   + + GG++ +pg ++d y++y +laaLal
   KHJ32267.1 337 DKLAARQFLIEQTQyKIGGFSKSPGDPPDIYHSYLGLAALAL 378
                  566799**********************************97 PP

>> SQHop_cyclase_C  Squalene-hopene cyclase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   3.7e-06     0.033      97     231 ..      64     209 ..      40     226 .. 0.58
   2 ?   -4.1   0.0      0.71   6.4e+03      29      47 ..     250     268 ..     247     272 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.7e-06
                      HHHHHHTB-TTSSB-SS.SSSB--SGGGGSTT-SSS-SSB--BHHHHHHHHHHHHHHT--TTSHHHHHHHHHHHHHS-TTS--..........- CS
  SQHop_cyclase_C  97 veWilglqsknGGwaaf.dkdntkellnkiPfadhealldpptadvtarvlellaqlgeeedsealkraveylkkeqepdGsW..........f 179
                       +Wil  q  nGG+    ++   +e+  ++ +   ++ +dp+    t   +  l+ +g+ ++ e + +++ +lkk q++dGs+          +
       KHJ32267.1  64 RDWILKCQHPNGGFCGSpNHRFPEEYYLDLSVDGNKSEVDPANLPATYFAILSLGLVGDLRKIERI-KCLRWLKKLQREDGSFgelltlegkiW 156
                      567777777777775441444456666667777777777777766666666666666666555544.577777777777776433333322223 PP

                      -SSBSSHHHHHHHHHHHHHHTT--.TTSHHHHHHHHHHHTT--TTSSBB--GG CS
  SQHop_cyclase_C 180 GrWGvnyiyGtwsvlsalaavged.leepvirkavdWlksvqnedGGWGesae 231
                      G   + y y + ++   l   +e+ +++  +++ v+ + s q  dGG  e+++
       KHJ32267.1 157 GGRDMRYCYVAAAIRWILGGDQENfEDDINVENLVQHVLSGQTYDGGISETSQ 209
                      33345666666666666655555523333466667777777777777777665 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 0.71
                      HHHHHHTT-B-S--GGGGT CS
  SQHop_cyclase_C  29 aleWllekqvlvkGdWkvk 47 
                      +l+Wl+++qv  +  +++k
       KHJ32267.1 250 TLRWLVSRQVGYQVVYNEK 268
                      6789999998776655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       523  (0.0291706); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 2888.57
//
Query:       KHJ32268.1  [L=236]
Description: putative trna (uracil-5-)-methyltransferase trm9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.3e-12   45.8   0.0    1.1e-11   45.2   0.0    1.3  1  Methyltransf_11  Methyltransferase domain
    5.6e-10   39.8   0.0    9.6e-10   39.0   0.0    1.4  1  Methyltransf_25  Methyltransferase domain
    9.6e-08   32.0   0.0    8.4e-07   29.0   0.0    2.0  2  Methyltransf_23  Methyltransferase domain
      2e-07   30.9   0.0    2.8e-07   30.4   0.0    1.3  1  Methyltransf_31  Methyltransferase domain
      7e-06   26.7   0.0    1.6e-05   25.6   0.0    1.6  1  Methyltransf_12  Methyltransferase domain
    0.00011   21.6   0.0    0.00013   21.3   0.0    1.3  1  CMAS             Mycolic acid cyclopropane synthetase
    0.00015   21.4   0.0    0.00019   21.1   0.0    1.2  1  NodS             Nodulation protein S (NodS)
    0.00024   20.6   0.1     0.0004   19.9   0.1    1.4  1  TehB             Tellurite resistance protein TehB
  ------ inclusion threshold ------
      0.037   13.6   0.0      0.056   13.0   0.0    1.3  1  MetW             Methionine biosynthesis protein MetW
      0.039   12.9   0.0      0.056   12.4   0.0    1.2  1  Methyltransf_9   Protein of unknown function (DUF1698)
      0.087   12.6   0.0       0.11   12.2   0.0    1.3  1  2OG-Fe_Oxy_2     2OG-Fe dioxygenase


Domain annotation for each model (and alignments):
>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   0.0   6.9e-15   1.1e-11       2      95 ..      56     148 ..      55     149 .. 0.94

  Alignments for each domain:
  == domain 1  score: 45.2 bits;  conditional E-value: 6.9e-15
                      EET-TTSHHHHHHHHTTSEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCCTSS-TT-EEEEEEES-CCC-...CCHHHHHHHHHHHEEEEE CS
  Methyltransf_11   2 dvGcGtGrlaealakrgarvvgvDlskemlklakekaseeglkvefvvadaeklpfednsfDlvvssevlhhv...edpekalkeiaRvLkpgG 92 
                      dvGcG+G+++    ++   ++g D sk+++++ak+k+ +++   +++ ad   lp++++  D+ +s  v+hh+   +++++a+k+i  +L ++G
       KHJ32268.1  56 DVGCGNGKYLSINNNNI-FIMGNDRSKNLIQIAKKKIYTSN---TIMIADSLYLPYQNERLDFAISIAVIHHLstrQRRRDAIKNIISCLHQDG 145
                      9**********999665.9********************98...689999999********************9999***************** PP

                      EEE CS
  Methyltransf_11  93 llv 95 
                        +
       KHJ32268.1 146 QAL 148
                      876 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   0.0   5.9e-13   9.6e-10       3      97 .]      56     145 ..      55     145 .. 0.88

  Alignments for each domain:
  == domain 1  score: 39.0 bits;  conditional E-value: 5.9e-13
                      EET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCGBSSSTTTEEEEEEESTGGGSS.HHHHHHHHHHHHHHEEE CS
  Methyltransf_25   3 dlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeeglnvefvqgdaedlpfedgsfDlvvssgalhhls.dedlekalkeiarvLkp 95 
                      d+GcG+G+++    ++     ++g D s++++++a++++     + +++ +d   lp+++++ D+ +s+ ++hhls ++++++a+k+i ++L +
       KHJ32268.1  56 DVGCGNGKYLSINNNN---IFIMGNDRSKNLIQIAKKKIY---TSNTIMIADSLYLPYQNERLDFAISIAVIHHLStRQRRRDAIKNIISCLHQ 143
                      9******998877655...79******************4...36799********************877999651566788*********99 PP

                      EE CS
  Methyltransf_25  96 gG 97 
                      +G
       KHJ32268.1 144 DG 145
                      98 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.0   5.2e-10   8.4e-07      12     125 ..      40     157 ..      27     209 .. 0.78
   2 ?    0.9   0.0      0.22   3.6e+02      23      40 ..     214     231 ..     206     235 .. 0.81

  Alignments for each domain:
  == domain 1  score: 29.0 bits;  conditional E-value: 5.2e-10
  Methyltransf_23  12 klerllpklraggrvLdiGcGtGillevlrengfsvtgvDlspeaveiae......kakkaqkdqfdeqeaaepqgkfdlIvlrevlehvp... 96 
                       +e++l++l +g+  +d+GcG G  l+ +  n   + g D s ++++ia+      +++   ++ +     ++++++ d+++++ v++h+    
       KHJ32268.1  40 IVEKFLQNLSPGSIGIDVGCGNGKYLS-INNNNIFIMGNDRSKNLIQIAKkkiytsNTIMIADSLY----LPYQNERLDFAISIAVIHHLStrq 128
                      67899999999************7777.566777899***********975444433333333333....555999**************9543 PP

  Methyltransf_23  97 dppellrqiatllkpgGylllseplaslk 125
                          ++++i ++l  +G +l+ +++ ++k
       KHJ32268.1 129 RRRDAIKNIISCLHQDGQALIFVWALEQK 157
                      4779***************9999876664 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.22
  Methyltransf_23  23 ggrvLdiGcGtGillevl 40 
                      +g+vLd+G+   ++  ++
       KHJ32268.1 214 NGKVLDYGYERDNWWAIC 231
                      789******999886665 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   1.7e-10   2.8e-07       8     109 ..      55     149 ..      49     195 .. 0.87

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 1.7e-10
  Methyltransf_31   8 lDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldnveFeqgdieeleklledekfDlilsnevlnaladpd...kileeie 98 
                      +D+GCG+G+++   +     ++ ++G D+s++ i+ A++    + ++  +  ++d   l+  ++ e+ D+ +s +v+++l+  +   +++++i+
       KHJ32268.1  55 IDVGCGNGKYLSINN----NNIFIMGNDRSKNLIQIAKK----KIYTSNTIMIADSLYLP--YQNERLDFAISIAVIHHLSTRQrrrDAIKNII 138
                      8********998888....4788**************99....57888899*********..***************88776542227999999 PP

  Methyltransf_31  99 rvlkpggilli 109
                      + l+++g  li
       KHJ32268.1 139 SCLHQDGQALI 149
                      99999998776 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   9.5e-09   1.6e-05       2      98 ..      56     146 ..      55     147 .. 0.76

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 9.5e-09
  Methyltransf_12   2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhl...kdirevldnirkl 92 
                      ++GcG+G +l+   ++   i + g D s++ i+ ak+k    +  +n+ +  + l l  +   +  D  +++ v+hhl   + +r++++ni ++
       KHJ32268.1  56 DVGCGNGKYLSINNNN---IFIMGNDRSKNLIQIAKKK----IYTSNTIMIADSLYLPYQN--ERLDFAISIAVIHHLstrQRRRDAIKNIISC 140
                      9******999876555...*************444444....3333344444444444333..59***************77888********* PP

  Methyltransf_12  93 LkpgGr 98 
                      L ++G+
       KHJ32268.1 141 LHQDGQ 146
                      ****97 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   8.2e-08   0.00013      59     167 ..      47     152 ..      22     201 .. 0.84

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 8.2e-08
                 T--TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHTS-SSS-EEEEES-GGG-----SEEEEES-GGGTSG.GGHHHHHHHHHHHS CS
        CMAS  59 elkpGmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakkrvdeldlerkvevklldyedldekvdrvvsvgafehvgk.enydtffkklkkll 156
                 +l pG+  +d+GcG G+ +   +++ ++ ++g   Sk+  + akk++   ++   ++ ++l y+  +e++d  +s+ ++ h+ + ++  + +k++ + l
  KHJ32268.1  47 NLSPGSIGIDVGCGNGKYLS--INNNNIFIMGNDRSKNLIQIAKKKIYTSNTIMIADSLYLPYQ--NERLDFAISIAVIHHLSTrQRRRDAIKNIISCL 141
                 799*************9875..56667************************************9..599*************76156678899999999 PP

                 -TT-EEEEEEE CS
        CMAS 157 kedGllllhti 167
                 ++dG  l+   
  KHJ32268.1 142 HQDGQALIFVW 152
                 99999887654 PP

>> NodS  Nodulation protein S (NodS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   1.2e-07   0.00019      48     164 ..      55     170 ..       7     183 .. 0.79

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 1.2e-07
        NodS  48 levGcaaGalterlapyckrltvv..dvveeaiararervkesshiswivsdvqqfstdekfdlivvaevlyyiedvaelraavrnlvsllapdgq.lv 143
                 ++vGc  G +   l++  +++ ++  d  ++ i+ a++++   s+ + i   +    ++e+ d  +   v+++++  ++ r a++n++s l  dgq l+
  KHJ32268.1  55 IDVGCGNGKY---LSINNNNIFIMgnDRSKNLIQIAKKKIYT-SNTIMIADSLYLPYQNERLDFAISIAVIHHLSTRQRRRDAIKNIISCLHQDGQaLI 149
                 6777877754...66776666665446677888999999988.45555555666667899*********************************99769* PP

        NodS 144 fGsardavcrrwGhvaGaetv 164
                 f  a ++   r G   G e  
  KHJ32268.1 150 FVWALEQKGSRRGWHEGGEQD 170
                 ******999999988888865 PP

>> TehB  Tellurite resistance protein TehB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.1   2.5e-07    0.0004      26     133 ..      45     150 ..      14     158 .. 0.71

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 2.5e-07
                 CCCS-S-EE.EEES-TTSHHHHHHHHTT-EEEEEES-HHHHHHHHHHHHHTT-TTEEEEE--.GGG----S-EEEEEEESSGGGS-.GGGHHHHHHHHH CS
        TehB  26 vkivkpgkv.ldlgcgqgrnslylsllgydvtawdknensiafleeikekenlknistalyd.ineaklderydfilstvvlmfle.aeripsiienmq 121
                  + ++pg + +d+gcg+g+   yls++  ++  +  n+ s ++l +i++k+  ++ +  + d +     +er df +s  v+  l  ++r  + i+n+ 
  KHJ32268.1  45 LQNLSPGSIgIDVGCGNGK---YLSINNNNIFIMG-NDRS-KNLIQIAKKKIYTSNTIMIADsLYLPYQNERLDFAISIAVIHHLStRQRRRDAIKNII 138
                 56688887559*****998...7888877765443.3333.3444444444444333333331333455799******999998862678899****** PP

                 HTEEEEEEEEEE CS
        TehB 122 ectkvggynliv 133
                  c +  g  li 
  KHJ32268.1 139 SCLHQDGQALIF 150
                 ****99999984 PP

>> MetW  Methionine biosynthesis protein MetW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   3.4e-05     0.056       9      80 ..      46     116 ..      40     138 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.4e-05
        MetW   9 elikpgsrvldlGcGdGellellkeekqvdgrGleldeegvaecvakGlsviqgdldkdl.enfedksfdyvv 80 
                 + + pgs  +d+GcG+G+ l++ ++  ++   G + +++ ++ + +k  +     + + l   ++++++d+++
  KHJ32268.1  46 QNLSPGSIGIDVGCGNGKYLSINNN--NIFIMGNDRSKNLIQIAKKKIYTSNTIMIADSLyLPYQNERLDFAI 116
                 567899**************99766..6777777777766655544433333333333331346666666665 PP

>> Methyltransf_9  Protein of unknown function (DUF1698)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   3.4e-05     0.056     104     215 ..      38     147 ..      25     158 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.4e-05
                     HHHHGGGS.--TT-EE.EEET-TTSHHHHHHHHCT-SEEEEE---HHHHHHHHHHHCCTTTTSSEEEE---GGGS-T.---EEEEEEES-GGG.. CS
  Methyltransf_9 104 Wdrvlphlsdlkgrti.ldvGcgnGyhlwrmvgegaklvvGidPselfliqfeavrkllgedqrahllplgieqlpe.leafdtvfsmGvlyh.. 194
                     W  v++ l +l   +i +dvGcgnG +l   + ++  +++G d s+  liq  a +k+ ++++  +    ++  lp   e +d   s+ v++h  
      KHJ32268.1  38 WPIVEKFLQNLSPGSIgIDVGCGNGKYL--SINNNNIFIMGNDRSKN-LIQI-AKKKIYTSNTIMIAD--SL-YLPYqNERLDFAISIAVIHHls 125
                     889999999999777769*******987..58999999999998765.6666.445555444333322..22.2333256677777777777754 PP

                     .-S-HHHHHHHHHCTEEEEEEE CS
  Methyltransf_9 195 .rrsPldhllqlkdqlvkgGel 215
                      r+   d + ++  +l+++G+ 
      KHJ32268.1 126 tRQRRRDAIKNIISCLHQDGQA 147
                     4555667777777888888875 PP

>> 2OG-Fe_Oxy_2  2OG-Fe dioxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   7.1e-05      0.11      93     138 ..     119     169 ..      85     189 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 7.1e-05
                   EEEEEEEEETT.TS-B--STTSSB--SSSEEEEEEEEEESE.....EE--E CS
  2OG-Fe_Oxy_2  93 ievhqiRieatpdqpgeptPeGvHrDGvdlvavllinrenv.....egget 138
                   + +h++ ++++ +++ ++  +++H+DG+ l++v  +++++      egge 
    KHJ32268.1 119 AVIHHLSTRQRRRDAIKNIISCLHQDGQALIFVWALEQKGSrrgwhEGGEQ 169
                   568*******************************99998875555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 1834.28
//
Query:       KHJ32269.1  [L=415]
Description: putative ubiquitin-specific protease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-31  110.3   0.0    1.4e-31  109.9   0.0    1.2  1  UCH            Ubiquitin carboxyl-terminal hydrolase
      4e-16   59.5   0.1    3.1e-14   53.3   0.1    2.2  1  UCH_1          Ubiquitin carboxyl-terminal hydrolase
     0.0028   17.2   2.3      0.018   14.5   0.0    3.0  4  Peptidase_C98  Ubiquitin-specific peptidase-like, SUMO isopep
  ------ inclusion threshold ------
       0.41   10.4   4.8        7.3    6.4   1.3    2.8  2  zf-H2C2_5      C2H2-type zinc-finger domain
        1.8    8.1  13.7       0.69    9.5   1.6    3.6  3  zn-ribbon_14   Zinc-ribbon


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.9   0.0     4e-35   1.4e-31       2     257 .]     109     405 ..     108     405 .. 0.88

  Alignments for each domain:
  == domain 1  score: 109.9 bits;  conditional E-value: 4e-35
                 EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHHSH-CCEE--HHHHHHHHHHSGGGT....... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....... RF
         UCH   2 GlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkellkskskavsPkklkktlsklaksfs....... 93 
                 G+ N +  Cy ns+lQ+L++ p+  ++l+s++++k   r   ++           +a++l  +f++ ++      +P++l+++ ++l k f        
  KHJ32269.1 109 GIYNPAVLCYRNSLLQALLHAPKVVNWLRSYHRSKICVRGGISC-----------VACHLLAVFNSYWG-----STPSELLQATKELDKVFIstgwqdg 191
                 999***************************98888888877776...........9************5.....4899999999999999877999999 PP

                 .SSSTCEHHHHHHHHHHHHHHHHCC.......HCCCHHH..HHHCCCTTSHHHHHH-EEEEE..................................... CS
                 .xxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxx..xxxxxxxxxxxxxxxxxxxxx..................................... RF
         UCH  94 .gykqqDaqEflaflLdqlhedlnr.......evaeekw..kkhlkrndslitdlfegqlks..................................... 145
                  +++q+D +E l  l + l+++l +         ++  +  ++++k  ++  ++  +g+++                                      
  KHJ32269.1 192 rTGRQEDPEEQLVWLAKVLSQQLPSiqfdafeAISR--FilNSTTKCSSCGYVSTNKGEVEGtisidlqprikkgtiadyikpyfchrvegfkcdhcss 288
                 9************************99988752222..2357777777777888888888878888888888889999999999999************ PP

                 ......EEEEEEB-SEEEEEEESEEETEEEEE--SEEB--SEEE-GGGBSS-BTTS-TCS-BEEEEEEEEEESCTTSEEEEEEEECTTTTEEEEEETTE CS
                 ......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 146 ......klklkrlPeiLiihlkRfsynssksKlntkvefpeeldlssylaeekkkkteekkkYeLiavvvHsGslssGHYvayiknekngkWykydDet 238
                       + ++ + Pe+L+i+lkRf ++ +  K +t++ f  +l+l++y ++ +k     +++Y+L+a+++H G+ +sGHYv+ ++   +g W+k+dD +
  KHJ32269.1 289 msskqrTREIYHQPETLVIQLKRFGWDGR--KDSTPIPFSSNLSLNHYRSDVNKF----SCEYDLSAIICHNGGIDSGHYVCRAR-GPDGHWMKFDDLQ 380
                 **************************999..***************999855554....477********************999.66999******** PP

                 EEEE-HHCCCTT......CEEEEEE CS
                 xxxxxxxxxxxx......xxxxxxx RF
         UCH 239 vkevkeeeevls......sayiLfY 257
                 v+e++ e+++        ++y+LfY
  KHJ32269.1 381 VTEMTPEQAMHPgsrngwTPYLLFY 405
                 *****88554448899********* PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.3   0.1   8.6e-18   3.1e-14       5     320 .]     112     381 ..     109     381 .. 0.76

  Alignments for each domain:
  == domain 1  score: 53.3 bits;  conditional E-value: 8.6e-18
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxx..xxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   5 nhivnsYlNslLQvlyfipplrnlals.hlakeckke..hcLlcElgflfdmldkak.glncqasnFlralssipeasalglileeeeetekssaisls 99 
                 n +v +Y NslLQ+l + p + n + s h +k c +   +c++c l+ +f+    +  ++  qa+  l ++  +  ++  +  ++e+ e          
  KHJ32269.1 112 NPAVLCYRNSLLQALLHAPKVVNWLRSyHRSKICVRGgiSCVACHLLAVFNSYWGSTpSELLQATKELDKVFISTGWQDGRTGRQEDPE---------- 200
                 66789*****************777652777789998889**********777666635577777655555555557777776555322.......... PP

                 xxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 100 sliq..sfnrflldqlekelketkknsseeesaieqllgtkaettirclkCgseksrkss...tlvldlkyPkpsnekkeakvtfasilksslerektt 193
                    q   + ++l +ql +             +a+e + ++ +++t++c++Cg  +++k+    t+++dl   +p    + +k t+a+++k  ++  + +
  KHJ32269.1 201 --EQlvWLAKVLSQQLPSIQF----------DAFEAISRFILNSTTKCSSCGYVSTNKGEvegTISIDL---QP----RIKKGTIADYIKPYFCH-RVE 279
                 ..2211356666666655533..........44555556679***********9987765233677788...23....44568***********9.788 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 194 rawCekCkryqpteqrktvknlPpvLalnakle.eeeelelwktknwlpleiklsldedknleeklkeerekakaekeikvYeLqsvvvhigdskesgh 291
                    C++C++ ++ ++++ + + P+ L++++k++  +      k+++ +p + +lsl++ +            ++ +k +  Y+L ++++h g + +sgh
  KHJ32269.1 280 GFKCDHCSSMSSKQRTREIYHQPETLVIQLKRFgWDG----RKDSTPIPFSSNLSLNHYR------------SDVNKFSCEYDLSAIICHNG-GIDSGH 361
                 899****************************997664....3456889988888766543............3567899*************.555*** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 292 LvslvkvaekelerdppesqWylFNDflV 320
                 +v+ ++          p+++W++F+D++V
  KHJ32269.1 362 YVCRARG---------PDGHWMKFDDLQV 381
                 ******4.........3479*******98 PP

>> Peptidase_C98  Ubiquitin-specific peptidase-like, SUMO isopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1      0.27   9.7e+02       6      30 ..     112     136 ..     111     156 .. 0.80
   2 ?   -2.9   0.0         1   3.7e+03     132     145 ..     233     246 ..     204     250 .. 0.76
   3 ?   -0.2   0.1      0.15   5.5e+02     132     150 ..     280     298 ..     265     306 .. 0.73
   4 !   14.5   0.0   5.1e-06     0.018     206     257 ..     332     387 ..     324     395 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.27
  Peptidase_C98   6 nkenlCWLDsllvalvhletlkkal 30 
                    n   lC+ +sll al+h  ++ + l
     KHJ32269.1 112 NPAVLCYRNSLLQALLHAPKVVNWL 136
                    66789************98776655 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1
  Peptidase_C98 132 efeCseCgvkkker 145
                      +Cs+Cg+ ++++
     KHJ32269.1 233 TTKCSSCGYVSTNK 246
                    56899999887765 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.15
  Peptidase_C98 132 efeCseCgvkkkervektl 150
                     f+C++C+  ++++ ++++
     KHJ32269.1 280 GFKCDHCSSMSSKQRTREI 298
                    599****998888877766 PP

  == domain 4  score: 14.5 bits;  conditional E-value: 5.1e-06
  Peptidase_C98 206 ekysfefe..gkqYsvtaviqYkk..elkHFvtwirnsdgsWlecDDLkgpvckth 257
                    ++y  + +  +++Y+++a+i  +   +  H+v   r  dg+W+++DDL+ ++++ +
     KHJ32269.1 332 NHYRSDVNkfSCEYDLSAIICHNGgiDSGHYVCRARGPDGHWMKFDDLQVTEMTPE 387
                    5554444411478*******998622567*******************98776654 PP

>> zf-H2C2_5  C2H2-type zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1    0.0094        34       2      15 ..     235     248 ..     235     250 .. 0.90
   2 ?    6.4   1.3     0.002       7.3       1       7 [.     281     287 ..     281     294 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0094
   zf-H2C2_5   2 KCsqCDYstawksn 15 
                 KCs C Y+++ k++
  KHJ32269.1 235 KCSSCGYVSTNKGE 248
                 9*********9986 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.002
   zf-H2C2_5   1 YKCsqCD 7  
                 +KC++C+
  KHJ32269.1 281 FKCDHCS 287
                 9*****8 PP

>> zn-ribbon_14  Zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1      0.06   2.1e+02      15      22 ..     152     159 ..     150     163 .. 0.82
   2 ?    9.5   1.6   0.00019      0.69       2      13 ..     235     246 ..     234     247 .. 0.91
   3 ?    3.4   1.2     0.016        56       2      12 ..     282     292 ..     281     294 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.06
  zn-ribbon_14  15 CkACvLLe 22 
                   C AC LL 
    KHJ32269.1 152 CVACHLLA 159
                   99****97 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00019
  zn-ribbon_14   2 kCerCGylSSqk 13 
                   kC+ CGy+S +k
    KHJ32269.1 235 KCSSCGYVSTNK 246
                   8********997 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.016
  zn-ribbon_14   2 kCerCGylSSq 12 
                   kC  C  +SS 
    KHJ32269.1 282 KCDHCSSMSSK 292
                   7*********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       809  (0.0451224); expected 358.6 (0.02)
Passed bias filter:                      621  (0.0346366); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 2855.07
//
Query:       KHJ32270.1  [L=408]
Description: hypothetical protein EV44_g3769 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      4e-09   36.7   0.1    1.1e-08   35.3   0.0    1.7  2  rve             Integrase core domain
    2.9e-07   30.3   0.1    9.2e-07   28.7   0.1    1.9  1  Chromo          Chromo (CHRromatin Organisation MOdifier) dom
     0.0023   18.0   0.1     0.0049   16.9   0.1    1.6  1  Integrase_H2C2  Integrase zinc binding domain
  ------ inclusion threshold ------
       0.14   11.5   0.2       0.83    8.9   0.1    2.0  2  Polyoma_coat    Polyomavirus coat protein


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   2.4e-12   1.1e-08       8     117 ..      42     148 ..      36     150 .. 0.89
   2 ?   -2.8   0.0       1.6   7.1e+03      42      77 ..     236     275 ..     226     287 .. 0.64

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 2.4e-12
         rve   8 wqvDvt.vvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpqdn 105
                 +++D+  +++i++g     ++vv+d  s+ ++a  l++ ++ s++  +++r + + +   p +++sD+g+++ts  +++++  l+i+ +++ + +p++ 
  KHJ32270.1  42 ISMDFItELPISEGC--TNMIVVTDRLSKGVVADGLKSIDAESVAKWFIKRYLPYHFL--PSAIVSDRGTQFTSAFWKRICDLLRIKRRLSTAFSPETD 136
                 679999899977666..99********************6666666777777777777..*************************************** PP

         rve 106 GkvErfhrtlkd 117
                 G  Er++  +++
  KHJ32270.1 137 GSTERANEVIET 148
                 *******98876 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.6
         rve  42 lsdemdastvlalleravarfggve....pervlsDngse 77 
                 + +e++ +++ +  ++a+++  g +     e +++D++  
  KHJ32270.1 236 VAQESQEQNTNKYRQQAISYKVGDKvwlnLENIKTDRQCK 275
                 5555555555566666666666666777777888887654 PP

>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.1     2e-10   9.2e-07       1      43 [.     341     382 ..     341     390 .. 0.86

  Alignments for each domain:
  == domain 1  score: 28.7 bits;  conditional E-value: 2e-10
                 EEEEEEEEEEEETTEEC.EEEEEEETTSTGGGTEEEEGGGCSSH CS
      Chromo   1 yeVerIidhrtdkdgle.leYlVKWkglpysentWEpeenlekc 43 
                 yeV++I+d ++  +++   +YlVKW g+     tWEpe+ l++ 
  KHJ32270.1 341 YEVDQILDQKKAPGKGRhMKYLVKWVGYAK--PTWEPESFLQNT 382
                 89********99999998********9875..6*******9987 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.1   1.1e-06    0.0049      38      57 ..       1      20 [.       1      21 [. 0.95

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1.1e-06
  Integrase_H2C2 38 mrkdvkkyvksCetCqrrkp 57
                    m kd++++v +C+ C+r+k+
      KHJ32270.1  1 MAKDIRRFVENCDGCARNKA 20
                    89****************96 PP

>> Polyoma_coat  Polyomavirus coat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0     0.099   4.4e+02      42      98 ..     234     293 ..     224     311 .. 0.79
   2 ?    8.9   0.1   0.00018      0.83     245     271 ..     379     405 ..     375     408 .] 0.87

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.099
                   SS---SBBGTGB---GGGS-B-EEEE...EE---SCSSTTSSEEEEEEEEEEEEEETTGG CS
  Polyoma_coat  42 kslaaekqftddspdkeqlpcysvar...iplpninedltcgnilmweavtvktevigvt 98 
                    ++a e q  +    ++q   y v     + l ni+ d  c ++    a    tev+g  
    KHJ32270.1 234 IAVAQESQEQNTNKYRQQAISYKVGDkvwLNLENIKTDRQCKKLDARFAKFTVTEVVGSH 293
                   556777777777788888889988532226899********9999888888889999965 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00018
                   EEBTTSBEEEEE--EEEEEEEEEEEEE CS
  Polyoma_coat 245 ftntsgtqqwkglpryfkitlrkrsvk 271
                   + nts  q wkgl r  ki ++k+  k
    KHJ32270.1 379 LQNTSALQLWKGLSRIDKINIKKQRKK 405
                   68*******************998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1086  (0.0605723); expected 358.6 (0.02)
Passed bias filter:                      562  (0.0313459); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 3105.05
//
Query:       KHJ32271.1  [L=363]
Description: hypothetical protein EV44_g3079 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-05   24.0   1.0    0.00012   22.3   1.0    2.0  1  Retrotrans_gag  Retrotransposon gag protein
      0.003   17.6   1.8     0.0047   16.9   1.8    1.3  1  zf-CCHC         Zinc knuckle
  ------ inclusion threshold ------
      0.012   15.3   1.0      0.022   14.4   1.0    1.4  1  zf-CCHC_5       GAG-polyprotein viral zinc-finger
       0.03   14.2   2.5       0.06   13.2   2.3    1.6  2  zf-CCHC_2       Zinc knuckle


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   1.0   2.7e-08   0.00012      12      86 ..     122     194 ..     113     249 .. 0.88

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 2.7e-08
  Retrotrans_gag  12 kswlkslvarsidasesWkdlkkaflktflpserkdqleeelsslrQgtesvreYvtrfktladqlde.vlteeak 86 
                     + w++  ++++     + +++ +++ k f +se+  ++ ++l s+rQg+  +r +++ f++++++++  ++++  k
      KHJ32271.1 122 HPWIEFAKSTNNF---TVENFLERLDKAFGDSEKITKAINKLNSIRQGNHEFRTFLQDFEQTISEAQGwGWEDRIK 194
                     5566666666666...9999**********************************************9876666443 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   1.8   1.1e-06    0.0047       3      17 ..     311     325 ..     309     326 .. 0.90

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1.1e-06
                 TSSSSSSSSTTTTST CS
     zf-CCHC   3 CynCGepGHiardCp 17 
                 C +CG+ GH+ rdC+
  KHJ32271.1 311 CIRCGGRGHRIRDCT 325
                 779***********9 PP

>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   1.0     5e-06     0.022       2      18 ..     308     324 ..     307     326 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5e-06
                 --B-TTT-SSBS-TTT- CS
   zf-CCHC_5   2 pglCpRCkkgkHwardC 18 
                 +glC RC+ + H  rdC
  KHJ32271.1 308 EGLCIRCGGRGHRIRDC 324
                 8**************** PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.4   6.4e+03      16      21 .]      47      52 ..      46      52 .. 0.88
   2 ?   13.2   2.3   1.3e-05      0.06       6      19 ..     311     324 ..     310     326 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.4
   zf-CCHC_2 16 IqdCPt 21
                I+++Pt
  KHJ32271.1 47 IRSHPT 52
                9****8 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 1.3e-05
   zf-CCHC_2   6 ChiCgkkGHyIqdC 19 
                 C +Cg  GH I+dC
  KHJ32271.1 311 CIRCGGRGHRIRDC 324
                 99************ PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       589  (0.0328518); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 2841.80
//
Query:       KHJ32272.1  [L=580]
Description: putative wd repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-08   33.7  17.7      0.033   15.1   0.3    6.5  7  WD40      WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.013   15.4   0.2        2.7    7.8   0.0    3.5  4  eIF2A     Eukaryotic translation initiation factor eIF2A


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0     0.001         9       7      37 ..      87     118 ..      82     119 .. 0.83
   2 ?   -2.6   0.1       1.4   1.3e+04       9      20 ..     147     157 ..     142     176 .. 0.76
   3 !   15.1   0.3   3.6e-06     0.033       8      38 .]     199     231 ..     193     231 .. 0.73
   4 ?    1.4   0.2     0.078     7e+02      23      38 .]     271     286 ..     256     286 .. 0.78
   5 !   10.4   0.0   0.00011         1       9      38 .]     301     333 ..     296     333 .. 0.81
   6 !    6.7   0.1    0.0016        14      10      30 ..     352     372 ..     339     378 .. 0.76
   7 ?   -0.9   0.0      0.42   3.8e+03      15      35 ..     400     420 ..     384     421 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.001
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 l+ H   vt +  +p g  l+sGs D+++++ 
  KHJ32272.1  87 LKIHeRAVTTVGLDPAGGRLISGSTDCSLKFH 118
                 5668555999999****************985 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.4
                 SSSSEEEEEEET CS
        WD40   9 GHssvtslafsp 20 
                 +H +++++ f+p
  KHJ32272.1 147 TH-PIHHVEFNP 157
                 57.788887766 PP

  == domain 3  score: 15.1 bits;  conditional E-value: 3.6e-06
                 ESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawla.sGsdDgtvriWd 38 
                 +GH s vt+  ++p ++ l+ +++ D t+riWd
  KHJ32272.1 199 KGHiSEVTHGTWNPVNKNLCvTAGTDSTLRIWD 231
                 7998888766677777776435555*******9 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.078
                 SEEEEEETTSEEEEEE CS
        WD40  23 awlasGsdDgtvriWd 38 
                 + l+s+  Dg++ +W+
  KHJ32272.1 271 NVLVSAVVDGSLVMWS 286
                 44778878*******5 PP

  == domain 5  score: 10.4 bits;  conditional E-value: 0.00011
                 SS...SSEEEEEEETTSSEEEE.EETTSEEEEEE CS
        WD40   9 GH...ssvtslafspdgawlas.GsdDgtvriWd 38 
                 +H   +++ +++ s dg+++++ G+ D+ +++Wd
  KHJ32272.1 301 AHepgTWIGGIDMSIDGRMVVTrGG-DNLIKLWD 333
                 564433489999999****996699.*******9 PP

  == domain 6  score: 6.7 bits;  conditional E-value: 0.0016
                 SSSEEEEEEETTSSEEEEEET CS
        WD40  10 HssvtslafspdgawlasGsd 30 
                 H s t +++sp+++++++Gs 
  KHJ32272.1 352 HYSMTNIKYSPNSSYIITGSA 372
                 4337999************85 PP

  == domain 7  score: -0.9 bits;  conditional E-value: 0.42
                 EEEEETTSSEEEEEETTSEEE CS
        WD40  15 slafspdgawlasGsdDgtvr 35 
                  +a++p  + +++Gs +  v+
  KHJ32272.1 400 TVAWHPKINQIITGSANSEVH 420
                 567777777788999777665 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.25   2.2e+03     136     168 ..     140     173 ..     129     177 .. 0.60
   2 ?    2.1   0.0     0.017   1.5e+02      62      93 ..     205     235 ..     182     249 .. 0.70
   3 ?    7.8   0.0   0.00031       2.7     109     163 ..     314     372 ..     310     380 .. 0.76
   4 ?    0.3   0.0     0.061   5.5e+02      42      91 ..     377     426 ..     371     442 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.25
                 EEEEEEE-TT--EEEE-T.TSSEEEEEE-TTT-S CS
       eIF2A 136 kkiakaeaanatlvewsp.dgryvlTattaprlr 168
                 ++ ++ e     +ve++p +g+ +l  + +p+ +
  KHJ32272.1 140 NTSKNSETHPIHHVEFNPmSGSTFLCISAHPQAK 173
                 4444455555556666663466666666666665 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.017
                 EEEEEE-TTSS-EEEEESSSSCEEEEEECSCE CS
       eIF2A  62 ihdvaWspkskefaviyGkmpakvslfdlkvk 93 
                 +   +W+p +k+++v  G  +++  ++d++ k
  KHJ32272.1 205 VTHGTWNPVNKNLCVTAGT-DSTLRIWDVNYK 235
                 3344799999999999995.667778887644 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.00031
                 -TTSSEEEEE-TTSSS-EEEEEETTTTEE.E......EEEE-TT--EEEE-TTSSEEEEEE- CS
       eIF2A 109 spkgklvllaGfgnlaGeleiwdvkkkkk.i......akaeaanatlvewspdgryvlTatt 163
                 s  g++v++ G  nl   +++wd+ k+k+ i      ++ +++  t +++sp+++y++T + 
  KHJ32272.1 314 SIDGRMVVTRGGDNL---IKLWDTRKFKSpIvtvshpSTSDHYSMTNIKYSPNSSYIITGSA 372
                 668999999999999...99***996654331111125667778899************875 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.061
                 EESSSTT--EEECCEESSS..EEEEEE-TTSS-EEEEESSSSCEEE.EEECS CS
       eIF2A  42 yliklkkkksevvelkkeg.pihdvaWspkskefaviyGkmpakvs.lfdlk 91 
                 ++++  + k e v+  + g p + vaW pk ++  +i G ++++v+ l++ +
  KHJ32272.1 377 FILNPGNLKPELVTTVTPGsPLITVAWHPKINQ--IITGSANSEVHvLYSPD 426
                 5555555555555555554169999***99997..68999998774267665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (580 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 4163.45
//
Query:       KHJ32273.1  [L=698]
Description: hypothetical protein EV44_g5401 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-14   54.2   0.0    5.5e-14   52.3   0.0    2.1  1  PAS_9     PAS domain
     0.0013   18.7   0.0     0.0029   17.6   0.0    1.6  1  PAS       PAS fold


Domain annotation for each model (and alignments):
>> PAS_9  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   0.0   6.1e-18   5.5e-14       4     103 ..     217     319 ..     214     320 .. 0.93

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 6.1e-18
       PAS_9   4 ilidnpdg...rilyaNeaalrllGyspeevlgksitdlf..vtdpeanerlraaleqgrkkerevevvlirkngetfwvlltaspvkdddgelvgiiv 97 
                 ++i +p+    +i+y+++ + r ++y+    ++++++ l+   td+++ +r+++a+ +g+  e ++ + ++r++g++f +ll +sp++dd+g ++ +++
  KHJ32273.1 217 FCISDPSQkenPIIYCSQEFYRTTQYGTSLAINRNCRFLQgpQTDKNTTSRIAKAIANGQ--ETNEILLNYRRDGTPFANLLMVSPLYDDKGIVRYFVG 313
                 566444444549************************************************..************************************* PP

       PAS_9  98 ilrDit 103
                  ++D+t
  KHJ32273.1 314 AQVDVT 319
                 *****9 PP

>> PAS  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   3.3e-07    0.0029      20     109 ..     226     314 ..     206     318 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 3.3e-07
                 TSBEEEECHHHHHHHSSTHHHCTTSBGGGGBSTTHHHHHHHHHHHHHHHTT-ECCCCEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEE CS
         PAS  20 dgrilyvNaaaeellGlsreevlgkslldliheeddaelaelleqlleqgeesrageisfklrdgrpihlevraspvrdaggeilgflgv 109
                    i+y+++++ + +++  + +++++   l  +++d  + +++ +++++g+e +    + ++ dg+p+  ++ +sp++d +g +++f+g 
  KHJ32273.1 226 ENPIIYCSQEFYRTTQYGTSLAINRNCRFLQGPQTDKNTTSRIAKAIANGQETNEILLNYRR-DGTPFANLLMVSPLYDDKGIVRYFVGA 314
                 45599***********************777666666******************9999999.***********************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (698 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4882.59
//
Query:       KHJ32274.1  [L=178]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1279.91
//
Query:       KHJ32275.1  [L=235]
Description: putative peroxisomal biogenesis factor 11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-67  227.6   0.2    1.4e-67  227.4   0.2    1.0  1  PEX11     Peroxisomal biogenesis factor 11 (PEX11)


Domain annotation for each model (and alignments):
>> PEX11  Peroxisomal biogenesis factor 11 (PEX11)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.4   0.2   8.1e-72   1.4e-67       1     223 []      13     231 ..      13     231 .. 0.97

  Alignments for each domain:
  == domain 1  score: 227.4 bits;  conditional E-value: 8.1e-72
       PEX11   1 ldklvkflaqtqgrDKllRalqYasrllayllerkgsskelvkklkklesqfslsRKllRlgkflehlqaaaklldnkledpvlrllavlrnlgyalYl 99 
                 ld++++f+a+t grDKl+Ra+q+++r++a++l r+++s++ +++++++++qf+l+R llR+gk++eh++aa ++ d+k  d +lr++av+ +lgya+Yl
  KHJ32275.1  13 LDRYLRFVATTTGRDKLIRACQFFARFYAWYLFRTNKSPNEIAPYEAIKKQFGLTRMLLRVGKNIEHFKAACVAADSKNLDTMLRFCAVGHQLGYAGYL 111
                 689************************************************************************99999******************* PP

       PEX11 100 llDhvlwlkklgllkvknakklsrlssrfwlfglvlslvrdlyelrllqekekklkkekkekeereeeklaavlkkrpallldlvknllDllialnelg 198
                  +D+  +l+++g++k++  k+l+r ++++w  gl++s ++ +y+l++l+++e++ +   k +e+  + +  +++k+r a+ l+l+ +l+Dl+i+ +++g
  KHJ32275.1 112 SFDTAAYLDAAGIMKTPMIKRLQREANKCWICGLLFSTASGIYSLYVLKQQENRIDM--KIGEDVVASR--KIQKERAAINLQLIADLCDLTIPTSSIG 206
                 *****************************************************9987..5566666666..8*************************** PP

       PEX11 199 ilklsdgvvGlaGliSSllgllqlw 223
                 +++l+dg++GlaG++SSl+g++++w
  KHJ32275.1 207 LVNLDDGIIGLAGTFSSLIGIYTQW 231
                 ************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       471  (0.0262703); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1861.87
//
Query:       KHJ32276.1  [L=255]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00051   20.0   1.1    0.00051   20.0   1.1    2.6  3  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   1.1   2.9e-08   0.00051       2      16 ..      86     100 ..      86     102 .. 0.91
   2 ?   -3.1   1.2      0.57     1e+04       2       6 ..     105     109 ..     104     109 .. 0.62
   3 ?   -0.4   0.4     0.081   1.5e+03       2       6 ..     125     129 ..     124     131 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 2.9e-08
                 CTSSSSSSSSTTTTS CS
     zf-CCHC   2 kCynCGepGHiardC 16 
                 +C+nC++ GHia+ C
  KHJ32276.1  86 QCFNCQKYGHIAKVC 100
                 6***********988 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.57
                 CTSSS CS
     zf-CCHC   2 kCynC 6  
                 kC nC
  KHJ32276.1 105 KCGNC 109
                 56666 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.081
                 CTSSS CS
     zf-CCHC   2 kCynC 6  
                  C nC
  KHJ32276.1 125 RCSNC 129
                 6**** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       756  (0.0421663); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 2037.39
//
Query:       KHJ32277.1  [L=288]
Description: putative mat1-1-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.8e-37  126.5   0.1    1.1e-36  126.0   0.1    1.2  1  MATalpha_HMGbox  Mating-type protein MAT alpha 1 HMG-box


Domain annotation for each model (and alignments):
>> MATalpha_HMGbox  Mating-type protein MAT alpha 1 HMG-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.0   0.1   6.3e-41   1.1e-36      36     182 ..      26     171 ..       7     186 .. 0.88

  Alignments for each domain:
  == domain 1  score: 126.0 bits;  conditional E-value: 6.3e-41
  MATalpha_HMGbox  36 reakakkakkklNgFmgfRsYylkLfsdlqqkeaSgfltqlWekdpfrnkWdliakvYsaiRdqlgkdkvtLqkflsiavphlkivepesYlel 129
                      r+ ++ +  k++N ++gfR++y k+f+ ++qkeaS  l  lWe+dpf+ kW++i+++Ys iRd + k+ ++L++fl++++p ++i++ ++Yl  
       KHJ32277.1  26 RKRSTARTNKPVNSWIGFRTFYKKIFPGMPQKEASIHLKALWEQDPFKIKWTIISAAYSKIRDIVTKKDAPLDEFLNLVCPRIGILSVDEYLPQ 119
                      67889999************************************************************************************** PP

  MATalpha_HMGbox 130 lgWklvkaeegkqkllrdadsekaalallenkeqplteldlltkileaGyivd 182
                      l+W  + +e+g +   +++   +++    +  +  +t  d++  + e+G+i  
       KHJ32277.1 120 LNWISSVNEDGIIVYKQNKM-PNLSNLPENILNTRMTDKDVVRFCAEKGFIDR 171
                      ****9999999998888554.44444455566689**************9754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.35
# Mc/sec: 2483.64
//
Query:       KHJ32278.1  [L=1053]
Description: putative cytoskeleton assembly control protein sla2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.3e-78  261.2   0.0    8.3e-78  261.2   0.0    2.9  5  ANTH           ANTH domain
      1e-54  184.9   7.7      1e-54  184.9   7.7    6.4  7  I_LWEQ         I/LWEQ domain
  ------ inclusion threshold ------
       0.11   13.0   1.1        1.3    9.5   0.3    3.4  2  FAA_hydro_N_2  Fumarylacetoacetase N-terminal domain 2
       0.38   11.1   8.0        1.2    9.5   5.6    3.2  2  DUF4854        Domain of unknown function (DUF4854)


Domain annotation for each model (and alignments):
>> ANTH  ANTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  261.2   0.0   1.9e-81   8.3e-78       1     273 [.      18     278 ..      18     281 .. 0.98
   2 ?   -4.4   2.1       1.7   7.6e+03     148     168 ..     422     444 ..     342     470 .. 0.55
   3 ?   -2.9   0.2       0.6   2.7e+03     100     127 ..     447     474 ..     413     503 .. 0.52
   4 ?   -2.3   0.1       0.4   1.8e+03     154     172 ..     636     654 ..     538     660 .. 0.58
   5 ?   -2.6   0.0      0.47   2.1e+03     148     173 ..     783     809 ..     755     819 .. 0.67

  Alignments for each domain:
  == domain 1  score: 261.2 bits;  conditional E-value: 1.9e-81
                 HHHHHHHHHT-SSS---HHHHHHHHHHHCSTTS-HHHHHHHHHHHCTSS.SHHHHHHHHHHHHHHHHHS-CHHHHHHHHTT-----TT---TSHHHSTH CS
        ANTH   1 dlevavvKAtshdevPpkekhvreilvltssrekvaalvwalsrrlkltrnwvvalKaLilvHklLreGhpsveqellsarrrisellnlssfddsssk 99 
                 +l+ +++KAts++e++pk+khvr+++v+t++ +k++ ++w+ ++ l+  +++v+++KaLi+vHk+L+eGhps+++e++++r +i +l+++ +     + 
  KHJ32278.1  18 ELANSIRKATSTEESAPKRKHVRSCIVYTWD-HKSSGAFWTGMKVLPILADEVQTFKALITVHKVLQEGHPSTLREAMNNRGWIDSLNKGLH----GEG 111
                 5899***************************.************************************************************....799 PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHSS-...CCCS--S.....TTSHCC...C--HHHHHHHHHHHHHHHHHHHTT---GGG--SHHHHHHHHHHHHHH CS
        ANTH 100 swdysafiraYakyLderlefhrklkvdkgelereeegslvavedpner..ktlsmeklldkieklqklldrllkckptgnalsnevilaalvllvkes 196
                  ++y+++ir+Y  +L  +l+fh +++ ++g++e+ee++sl+  +dpne+  +++++++l+d+ie++qkl++++++     n  +ne++++alv+lv+es
  KHJ32278.1 112 LRGYGPLIREYISFLMSKLNFHGQHPDFNGTFEYEEYISLKGINDPNEGyeTISNLMTLQDRIEQFQKLIFSHFR-----NGGNNECRISALVPLVQES 205
                 **************************************************99***********************.....9999*************** PP

                 HHHHHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT--GGG..S--GGGS-CHHCCCCCH CS
        ANTH 197 lklYkaineglinLlekffelskheadkaldiykrfskqfeelkeFyevckslgilrsle.iPelekippnllealee 273
                 +++Yk+i+++l+++++ + +     + ++++++ +++ q+ +l +Fy++c++l++l+sl+ +P+l+++ppnl++++e 
  KHJ32278.1 206 YGIYKFITSMLRAMHSTTGD-----DGALEPLRVQYDAQHYRLLKFYYECSNLRYLTSLItVPKLPQQPPNLFTEDES 278
                 ********************.....79**********************************************99986 PP

  == domain 2  score: -4.4 bits;  conditional E-value: 1.7
                 C...C--HHHHHHHHHHHHHHHH CS
        ANTH 148 r..ktlsmeklldkieklqklld 168
                 +     +me   d+i++lq++++
  KHJ32278.1 422 QgnYGQQMESKDDQIRSLQEQVN 444
                 12233444444455556665554 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 0.6
                 HHHHHHHHHHHHHHHHHHHHHHHHHSS- CS
        ANTH 100 swdysafiraYakyLderlefhrklkvd 127
                    y a+ + Y+++ +e le  +k k  
  KHJ32278.1 447 RTKYEALAKLYSQLRHEHLELLQKFKGV 474
                 3345555555555555555555555555 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 0.4
                 HHHHHHHHHHHHHHHHHHT CS
        ANTH 154 eklldkieklqklldrllk 172
                  +ll++i+k+ +++d++l+
  KHJ32278.1 636 AMLLSNIRKINDIIDSVLQ 654
                 3467777777777777776 PP

  == domain 5  score: -2.6 bits;  conditional E-value: 0.47
                 C..C--HHHHHHHHHHHHHHHHHHHTT CS
        ANTH 148 r.ktlsmeklldkieklqklldrllkc 173
                    + s +++l +++kl+kl+d +   
  KHJ32278.1 783 DvVINSNNDVLINLQKLSKLVDLFVPS 809
                 1347789999**********9988765 PP

>> I_LWEQ  I/LWEQ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   8.7      0.86   3.8e+03     105     149 ..     320     364 ..     309     368 .. 0.69
   2 ?   -7.2  13.9         4   1.8e+04      68     144 ..     332     411 ..     327     427 .. 0.75
   3 ?   -1.4   1.9      0.54   2.4e+03      73     138 ..     452     514 ..     432     537 .. 0.75
   4 ?    1.3   0.3     0.079   3.5e+02      68     120 ..     560     613 ..     553     633 .. 0.79
   5 ?   -3.5   0.0       2.5   1.1e+04      36      55 ..     744     763 ..     719     770 .. 0.62
   6 ?    3.8   1.3     0.014        64      39      98 ..     825     888 ..     801     900 .. 0.70
   7 !  184.9   7.7   2.3e-58     1e-54       1     153 []     903    1052 ..     903    1052 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.86
      I_LWEQ 105 eeeeldisklslvqakrqemeaqvkilklekeLeearkkLaeirk 149
                 ++e  + +++ +  + +q   +q ++++ ++e ee+++ Lae ++
  KHJ32278.1 320 TREYEEQQRMLEERQAQQLFSQQQAVIQAQREFEEQQRLLAEQQR 364
                 233444555666666677789999999999999999999988655 PP

  == domain 2  score: -7.2 bits;  conditional E-value: 4
      I_LWEQ  68 skslkrLeaaskaVkkatkelvkavkeakekqeeees...eeeeldisklslvqakrqemeaqvkilklekeLeearkkL 144
                  ++ ++L +  +aV +a +e+ ++ +  +e+q+++++   +++    ++ ++ q  ++ +ea+++ ++ +  L++  +k+
  KHJ32278.1 332 ERQAQQLFSQQQAVIQAQREFEEQQRLLAEQQRRDQEallSQQFQQQTQGRMAQLEQENLEARAQYARDQLMLQQYDQKI 411
                 45667788888888888888888888888777776633544445558888888888888999888888888887766665 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.54
      I_LWEQ  73 rLeaaskaVkkatkelvkavkeakekqeeeeseeeeldisklslvqakrqemeaqvkilklekeLe 138
                 +L +  +++++   el+++ k ++ k+ ++   +e +d+ ++ + + k++ +e    i +  ++L 
  KHJ32278.1 452 ALAKLYSQLRHEHLELLQKFKGVQLKAASA---QEAIDKREKLEREIKTKNLELADMIRERDRALY 514
                 566666677777777777777777666664...677888888888888888887777777777765 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.079
      I_LWEQ  68 skslkrLeaaskaVkkatkelvkavkeakekqeeee.seeeeldisklslvqak 120
                 ++++++Le+a ++ ++a +++ ++ ke  +++e+   ++eeel++ k+sl ++ 
  KHJ32278.1 560 NREMSDLEEALRKKSQALDDIHEKYKEGGSDAERLLrEKEEELEVYKQSLDDSL 613
                 678999999999999999999999999998877754447788887777776654 PP

  == domain 5  score: -3.5 bits;  conditional E-value: 2.5
      I_LWEQ  36 kakeeeLivaakevaastaq 55 
                 ++k ++L  +a++ a st +
  KHJ32278.1 744 EKKGDQLTNSARQSALSTIK 763
                 36777888888888887776 PP

  == domain 6  score: 3.8 bits;  conditional E-value: 0.014
      I_LWEQ  39 eeeLivaakevaastaqLvvasrvKadknskslk.rL......eaaskaVkkatkelvkavkeakek 98 
                 e eL +aa+++ a++ +L   s+ K+++ +   + +L       +a+ aV++a+ +l+ka+ + +++
  KHJ32278.1 825 ESELNKAADAINAAVERL---SKLKSKPTDGYSTyELhihesiLDAAIAVTNAIGKLIKAATATQQE 888
                 567788888888888887...4444444333222233333333889999999999999999988876 PP

  == domain 7  score: 184.9 bits;  conditional E-value: 2.3e-58
      I_LWEQ    1 ykknsqWteGLisAAkaVaaaanlLveaadavvqgkakeeeLivaakevaastaqLvvasrvKadknskslkrLeaaskaVkkatkelvkavkeake 97  
                  ykkn++WteGLisAAkaVa+++n+L+e+ad+v++g++++e+Liva+++vaastaqLv+asrvKa  +sks++ Le+ask+V  a+++lv++v+++ +
  KHJ32278.1  903 YKKNNRWTEGLISAAKAVASSTNTLIETADGVLSGRNSPEQLIVASNNVAASTAQLVAASRVKAGFMSKSQESLEEASKEVGAACRALVRQVQSMIK 999 
                  9***********************************************************************************************9 PP

      I_LWEQ   98 kqeeeeseeeeldisklslvqakrqemeaqvkilklekeLeearkkLaeirkakYr 153 
                  ++++    ee++d+ kl ++++k++eme+qv+il+le+ L +ar++L+e+rk +Y+
  KHJ32278.1 1000 DRDQG---EEQVDYGKLGAHEFKVREMEQQVEILQLENCLAAARQRLGEMRKVSYQ 1052
                  99996...899********************************************7 PP

>> FAA_hydro_N_2  Fumarylacetoacetase N-terminal domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.3    0.0003       1.3      30      74 ..     434     478 ..     413     505 .. 0.89
   2 ?   -1.9   0.0         1   4.6e+03      23      43 ..     561     581 ..     552     607 .. 0.60

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0003
  FAA_hydro_N_2  30 eiaptlqaaLdnWdevepaLeelyeaLnagtakeafafdpeelaa 74 
                    + + +lq+ ++ W++  +aL++ly++L + + +  ++f+  +l+a
     KHJ32278.1 434 DQIRSLQEQVNTWRTKYEALAKLYSQLRHEHLELLQKFKGVQLKA 478
                    45789**************************99999998777766 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1
  FAA_hydro_N_2  23 kkavdaseiaptlqaaLdnWd 43 
                    +++ d +e   +  +aLd+ +
     KHJ32278.1 561 REMSDLEEALRKKSQALDDIH 581
                    555555554444455555433 PP

>> DUF4854  Domain of unknown function (DUF4854)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   5.6   0.00026       1.2       4      79 ..     369     445 ..     367     455 .. 0.92
   2 ?   -3.6   0.0       3.2   1.4e+04      71     102 ..     721     752 ..     718     753 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00026
     DUF4854   4 fvqseevqsqieaakssledsGisle.vtaegntLvyeytlskslddaaldalkealaesldsqastfeslakqlkk 79 
                  + s+++q+q++   ++le+  ++    +a++  +  +y+ + +l + +l++l+  + ++++s +++  sl +q+++
  KHJ32278.1 369 ALLSQQFQQQTQGRMAQLEQENLEARaQYARDQLMLQQYDQKIKLLEGELSQLQGNYGQQMESKDDQIRSLQEQVNT 445
                 67799*****************9999778999999999999999******************************986 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 3.2
     DUF4854  71 eslakqlkkevkvenpivvvrvltsdGkelye 102
                 + +a+++++ v++ +   ++ + +++G++l++
  KHJ32278.1 721 SIFASSVADVVSNTKGLTRLAIDEKKGDQLTN 752
                 56789999999999999999999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1053 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2442  (0.136204); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.09u 0.27s 00:00:01.36 Elapsed: 00:00:00.46
# Mc/sec: 6908.08
//
Query:       KHJ32279.1  [L=169]
Description: hypothetical protein EV44_g6361 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-08   35.1   0.1    4.9e-08   33.5   0.0    1.8  2  LAMTOR    Late endosomal/lysosomal adaptor and MAPK and MTOR 
  ------ inclusion threshold ------
      0.078   11.9   0.1        0.1   11.5   0.1    1.1  1  DUF4507   Domain of unknown function (DUF4507)


Domain annotation for each model (and alignments):
>> LAMTOR  Late endosomal/lysosomal adaptor and MAPK and MTOR activator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.0   5.5e-12   4.9e-08       1      63 [.      20      82 ..      20      93 .. 0.78
   2 ?   -0.7   0.1      0.26   2.3e+03      45      52 ..     104     111 ..      86     127 .. 0.43

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 5.5e-12
      LAMTOR  1 nErtrLLadpqnnsgnysrgydnslqqqeqespekltdeqeaLnkIvqetsdnlIDI.Saidss 63
                +E++ LL  + +  + y++ + + +++    ++ + ++ + aL+k+v +ts++l+DI S++++ 
  KHJ32279.1 20 DEQSQLLFGDPPATTHYGS-FGERNSKSIYANQAEAQRANRALTKVVSNTSNHLVDIfSMVPQE 82
                79999**999988884555.55555555555555555************************987 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.26
      LAMTOR  45 kIvqetsd 52 
                 +Iv+++s 
  KHJ32279.1 104 NIVTKLSA 111
                 22222222 PP

>> DUF4507  Domain of unknown function (DUF4507)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   1.1e-05       0.1     140     193 ..      63     120 ..      55     130 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 1.1e-05
     DUF4507 140 qasleLarnivkdyfvlvp....ksvetLkqlpkaaPrFaanlitavtelYenkkekk 193
                 + +++ ++++v+ +++  +    +s+  L +++++ P+F +n++t +++ Y n+  ++
  KHJ32279.1  63 KVVSNTSNHLVDIFSMVPQeiatSSTTALFSIQNNHPQFYKNIVTKLSANYVNELPEQ 120
                 55666777788777766446666999*************************9986554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1190.76
//
Query:       KHJ32280.1  [L=564]
Description: hypothetical protein EV44_g0502 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (564 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       732  (0.0408277); expected 358.6 (0.02)
Passed bias filter:                      226  (0.0126053); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3814.83
//
Query:       KHJ32281.1  [L=353]
Description: hypothetical protein EV44_g2031 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       664  (0.037035); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.21s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2717.30
//
Query:       KHJ32282.1  [L=354]
Description: putative mitochondrial 30s ribosomal protein s10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.3e-25   87.8   0.0    1.1e-24   86.5   0.0    1.7  1  Ribosomal_S10  Ribosomal protein S10p/S20e


Domain annotation for each model (and alignments):
>> Ribosomal_S10  Ribosomal protein S10p/S20e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.5   0.0   5.9e-29   1.1e-24       2      97 ..     185     280 ..     184     281 .. 0.98

  Alignments for each domain:
  == domain 1  score: 86.5 bits;  conditional E-value: 5.9e-29
                    EEEEESSHHHHHHHHHHHHHHTTSSS-EE---EEEEEEEEEEEEE--SS--S--EEEEEEEEEEEEEEEE.E-HHHHHHHS-...S---SS-EEEE CS
  Ribosomal_S10   2 irlkSydsklLekavkkivraakelgikvkgpvplPtkrkrvtvlksphvdkksreqfeirthkRlidisdatketidtllkllqlnlpegVsvev 97 
                    ++l+Sy+ ++L+ ++++++raa+ l+++ +gpvplP  ++r+tv k  +++kk +e+fe++t +Rli+i+d ++e+++ +l++l+++   gV++++
     KHJ32282.1 185 LQLRSYSVQNLQFMADFALRAAYFLNLPASGPVPLPQITERWTVPKAHFIHKKIQENFERKTLRRLIQIKDGDPEVVRLWLGFLRKHAYYGVGMKA 280
                    89********************************************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       610  (0.0340231); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 2851.57
//
Query:       KHJ32283.1  [L=352]
Description: putative purine nucleoside phosphorylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-37  128.8   0.0    2.3e-37  128.5   0.0    1.2  1  PNP_UDP_1  Phosphorylase superfamily


Domain annotation for each model (and alignments):
>> PNP_UDP_1  Phosphorylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.5   0.0   1.3e-41   2.3e-37      28     233 ..      80     343 ..      33     344 .. 0.84

  Alignments for each domain:
  == domain 1  score: 128.5 bits;  conditional E-value: 1.3e-41
                 E.....TTEEEEEEEE...TTEEE.EEEE--.....SSHHHHHHHHHHHHHHHC--SEEEEEEEEEESSTTT-TT-EEEEEEEEESSSCCGCCTHHCC. CS
   PNP_UDP_1  28 e....grgfkfvtGtl...kgkpv.vivstG.....iGkpnaavvaeirllkefgvkaiiriGtaGglnpdlkvGDvvipddainfdgrsplygpkee. 112
                      g+ +k+++Gt+   +g ++  ++++G     +G +   +++++r+  ++++k++i++++aGgln +++vGD+++++d+i +  +s++++p ++ 
  KHJ32283.1  80 IpsvsGHVGKLIFGTIatrNGIKIhAVLMSGrahfyEGNDAKTTTFPVRVFGALNIKVLIVTNAAGGLNRNYRVGDIMVINDHISLPSLSGSFNPLIGp 178
                 14456799********999777775889999****99999999******************************************66666666666666 PP

                 ........TCCCCTTSSEE--HHHHHHHHHCHHTTT..................TTEEEEEEEEESESS-CHHHHHHHHHHTC-CEEESSHHHHHHHHH CS
   PNP_UDP_1 113 ........gqyfpdsydapadpelrallkeaaealg..................ikvhrGvvatadgfyaeteaelrllrrlgadaveMEtaavaqlAr 185
                         g +f++ +da +d  lr+++ +a++++                   +k+ +G++a + g+++et+ e r+l+  gad+v+M+t++++++Ar
  KHJ32283.1 179 ldessgtpGNRFLALSDA-YDYNLRKAAWQAWKKMSslrieegscsqtpgvdraRKLQEGIYAMVAGPTYETRTETRFLSAIGADVVGMSTVPEVIVAR 276
                 666***************.***********888888888888888888899999********************************************* PP

                 HTT--EEEEEEEEETTTB...................ETTCTCH.HCCCHHHHHHHHHHHHHHHHHH CS
   PNP_UDP_1 186 elgipfaairvvsdlaag...................gadaeatheeveefaqeaaknaaalllall 233
                 + gi+++++ +v++la+                    +  ++a+h+ev e+++ aa+ +  l+ ++l
  KHJ32283.1 277 HIGIRVLGLTLVTNLAVLemaprgdaelegcqnqnydISAGKANHKEVLEAGKVAADVMRDLIIEIL 343
                 **************99888888777777777777777666666668888888888888888777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       238  (0.0132746); expected 358.6 (0.02)
Passed bias filter:                      227  (0.0126611); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.20s 00:00:00.61 Elapsed: 00:00:00.35
# Mc/sec: 3040.57
//
Query:       KHJ32284.1  [L=254]
Description: hypothetical protein EV44_g3527 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.014   16.1   0.8      0.033   14.9   0.0    2.1  2  zf-RVT    zinc-binding in reverse transcriptase


Domain annotation for each model (and alignments):
>> zf-RVT  zinc-binding in reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.2      0.27   4.8e+03      24      32 ..      79      87 ..      39      95 .. 0.60
   2 ?   14.9   0.0   1.8e-06     0.033      43      81 ..     147     186 ..     130     194 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.27
      zf-RVT 24 Wkskappkv 32
                W+s+ p+k+
  KHJ32284.1 79 WESSWPHKH 87
                555555555 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1.8e-06
      zf-RVT  43 rlptadnllkrgies.ssrCqlCgqeeEtieHlfleCpfa 81 
                 ++  ++ l +r+++  ++  +lCg   E+++H++++Cp+ 
  KHJ32284.1 147 HIGLKSYLYRRKVPGvNNPSCLCGYPSENVKHAVMACPLK 186
                 556678899999997677788****************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.36
# Mc/sec: 2123.15
//
Query:       KHJ32285.1  [L=446]
Description: hypothetical protein EV44_g5118 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-57  194.6   0.0    1.6e-34  119.6   0.0    2.1  2  PIF1             PIF1-like helicase
    1.4e-07   31.4   0.0    2.1e-07   30.8   0.0    1.2  1  AAA_30           AAA domain
    0.00011   20.4   0.0    0.00017   19.7   0.0    1.3  1  Herpes_Helicase  Helicase
     0.0044   17.0   0.0     0.0097   15.9   0.0    1.6  1  AAA_5            AAA domain (dynein-related subfamily)
     0.0056   17.0   0.0      0.011   16.1   0.0    1.5  1  AAA_19           AAA domain
  ------ inclusion threshold ------
      0.016   15.3   0.0      0.035   14.1   0.0    1.6  1  ResIII           Type III restriction enzyme, res subunit
      0.034   14.4   0.0      0.091   13.0   0.0    1.7  2  AAA_22           AAA domain
      0.042   14.3   0.0      0.072   13.5   0.0    1.4  1  AAA              ATPase family associated with various cellul
      0.042   14.4   0.0       0.13   12.8   0.0    2.0  2  ABC_tran         ABC transporter
      0.058   12.8   0.0        0.1   12.0   0.0    1.3  1  PhoH             PhoH-like protein
      0.071   13.1   0.0       0.13   12.2   0.0    1.4  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
      0.086   13.2   0.0       0.17   12.2   0.0    1.5  1  AAA_16           AAA ATPase domain
       0.14   12.1   0.0       0.29   11.0   0.0    1.5  1  NACHT            NACHT domain


Domain annotation for each model (and alignments):
>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.6   0.0   1.2e-37   1.6e-34       3     120 ..     110     227 ..     108     236 .. 0.93
   2 !   73.2   0.0   1.5e-23   2.1e-20     249     364 .]     239     351 ..     228     351 .. 0.90

  Alignments for each domain:
  == domain 1  score: 119.6 bits;  conditional E-value: 1.2e-37
                 -HHHHHHHHHH.......HCTS-EEEEESTTSSCHHHHHHHHHHCHCTCCCEEEEESSHHHHHCC.TSEECHHHHT-TTSSS-HHHHHHHTSCCCHHHH CS
        PIF1   3 neeQkkvfdaiieavln.ekgklfFvtGsgGtgKtflwkallkklrsegkivlavAssGvAalllegGrtahsrfkiplekdeestckikrgsklaell 100
                 ++ Q+ +fd+i+  + n  k+++fF++G +GtgKtfl+k+l++k r egk+vl+vAssG+Aalll++Grt+hs+f ip++ +ee +c+i  +s+la ll
  KHJ32285.1 110 SSGQRFAFDKITTIIDNnVKPNTFFLQGPAGTGKTFLYKTLCNKYRWEGKVVLCVASSGIAALLLPKGRTSHSLFIIPINSNEETQCRITGNSDLAGLL 208
                 6789*******999987469***************************************************************************9988 PP

                 HC-SEEEEECGGGSBHHHHH CS
        PIF1 101 kktsliiwDEapmverecfe 120
                  +t liiwDE+ + + + f 
  KHJ32285.1 209 RRT-LIIWDEVTLQSSHDFA 227
                 775.9*******99988775 PP

  == domain 2  score: 73.2 bits;  conditional E-value: 1.5e-23
                 S---SS--...........EEEESSCCHHHHHHHHHHCCSSS--EEEE-EEE...........ESBSSCHHCHHHCCTTSS-SCEEE-TT-EEEE-S-- CS
        PIF1 249 evygdllqeltdkeyleerailcptnedvdeiNnyvlsklpgeekeylssDsisksseeieeldalypteflnslkanglpnhvLkLkvGvpvmllrNl 347
                  +y++   +  d + ++++ail+++n++  + Nn++ +  p e +ey++ D++++++ +       yp+efl +   +glp   L L+vG+pvmllrNl
  KHJ32285.1 239 YIYPQDQLSAGDVSIFNDQAILTSQNDEGTSFNNTIAELRPTESHEYFAQDKVQNEEARHI---SDYPAEFLHTHGGSGLPLGGLTLQVGMPVMLLRNL 334
                 567775566778899*************************************988776643...36********************************* PP

                 CTT-SC-TCEEEEEEEE CS
        PIF1 348 dqsaGLcNGtrlivtql 364
                  +++GL NGtrli+t+l
  KHJ32285.1 335 YPKVGLYNGTRLIITRL 351
                 **************987 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   1.5e-10   2.1e-07      19     107 ..     131     228 ..     108     233 .. 0.73

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 1.5e-10
      AAA_30  19 rvavltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLaeelgieastiakllkrlk.........grarlepgtllivDEagmvdtkqlaa 107
                  + +l+GpAGtGKt++ k+l + ++ +g+ v+ +A++g aA  L ++   ++  i  + ++ +         + a l ++tl+i DE+ + +++++aa
  KHJ32285.1 131 NTFFLQGPAGTGKTFLYKTLCNKYRWEGKVVLCVASSGIAALLLPKGRTSHSLFIIPINSNEEtqcritgnsDLAGLLRRTLIIWDEVTLQSSHDFAA 228
                 3679****************************************976554333333333222244555566666789999**********99999876 PP

>> Herpes_Helicase  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   1.3e-07   0.00017     732     774 ..     400     441 ..     371     445 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 1.3e-07
  Herpes_Helicase 732 lamtiaksqGlslekvAicFgnhknlklssvYvalsRatdsef 774
                       +m i ksqG  l++v ++ +        ++YvalsR+td ++
       KHJ32285.1 400 FSMVINKSQGQTLQRVGVDLSTP-VFSHGQLYVALSRVTDIDN 441
                      68*******************99.999************9754 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0     7e-06    0.0097       2      34 ..     133     165 ..     132     175 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 7e-06
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--T CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltr 34 
                 ++L+Gp GtgK++l + l+  +++e  +v++ +
  KHJ32285.1 133 FFLQGPAGTGKTFLYKTLCNKYRWEGKVVLCVA 165
                 79********************99999998866 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   7.9e-06     0.011       5      57 ..     124     173 ..     121     230 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 7.9e-06
      AAA_19   5 ve.alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAake 57 
                 ++ ++k +++++ +++GtGKT + k+ ++ + ++g+v    +l+va  g Aa  
  KHJ32285.1 124 IDnNVKPNTFFLQGPAGTGKTFLYKTLCNKYRWEGKV----VLCVASSGIAALL 173
                 555889999**************************66....8999999888755 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.5e-05     0.035       4      60 ..     109     164 ..     106     187 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.5e-05
                 E-HHHHHHHHHHT.......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEE CS
      ResIII   4 lreyQeeaienlleklks.krdkrglikmaTGtGKTlvaaklierllkkgkeekflfl 60 
                 + + Q  a +++   +++  + + ++++ + GtGKT+++  l+ +++ +gk   +l +
  KHJ32285.1 109 FSSGQRFAFDKITTIIDNnVKPNTFFLQGPAGTGKTFLYKTLCNKYRWEGK--VVLCV 164
                 66789999999998888633444778*****************99997654..34333 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   6.6e-05     0.091       9      51 ..     134     178 ..     129     217 .. 0.70
   2 ?   -3.3   0.0       7.1   9.7e+03      43      82 ..     360     403 ..     354     415 .. 0.62

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.6e-05
      AAA_22   9 vvtGesGtGKTtllrrlleqldeeakaee......erpevvfvtlpsst 51 
                 ++ G++GtGKT+l+++l +++  ++          ++++++   lp++ 
  KHJ32285.1 134 FLQGPAGTGKTFLYKTLCNKYR-WE---GkvvlcvASSGIAALLLPKGR 178
                 577***************9993.32...133346655555555555555 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 7.1
      AAA_22  43 vfvtlpsstsskdllrellralglelka....erlsseelleal 82 
                 v+ t+p++ ++++  ++++  ++++       + l ++ +++++
  KHJ32285.1 360 VTSTCPALHGREQYIHRIVMTTDENMYFtlsrRQLPLRPCFSMV 403
                 55677777777777777777777655555554444455555555 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   5.2e-05     0.072       3      23 ..     135     155 ..     133     210 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 5.2e-05
                 EESSTTSSHHHHHHHHHHHHT CS
         AAA   3 lyGppGtGKTllakavakelg 23 
                 l Gp GtGKT l k ++++  
  KHJ32285.1 135 LQGPAGTGKTFLYKTLCNKYR 155
                 88****************974 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       5.4   7.5e+03      89     114 ..      88     114 ..      65     116 .. 0.63
   2 ?   12.8   0.0   9.4e-05      0.13      14      43 ..     133     161 ..     124     300 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 5.4
                 HHHSTTGGTTCBGESTTS.GGS-HHHH CS
                 xxxxxxxxxxxxxxxxxx.xxxxxxxx RF
    ABC_tran  89 lsklglkelkdtvvkssp.ssLSgGqk 114
                 ++ l+++ ++++++ + + +++S Gq+
  KHJ32285.1  88 MEALNIDRVEEERQLNLAlTTFSSGQR 114
                 445555554444443333478888876 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 9.4e-05
                 EEEEESTTSSHHHHHHHHTTSS--SEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllagllkpteGeil 43 
                   + G+ G+GK+ L k+l++++++ eG++ 
  KHJ32285.1 133 FFLQGPAGTGKTFLYKTLCNKYRW-EGKVV 161
                 6789*******************9.78874 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   7.5e-05       0.1       9      36 ..     113     147 ..     106     161 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 7.5e-05
                 HHHHHHHHH.......H-SEEEEE--TTSSTTHHH CS
        PhoH   9 Qkeylealk.......kndivfaiGpaGtGKtyla 36 
                 Q+ +++ ++       k +  f  GpaGtGKt+l 
  KHJ32285.1 113 QRFAFDKITtiidnnvKPNTFFLQGPAGTGKTFLY 147
                 5555555544443444556899***********95 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   9.8e-05      0.13      18      47 ..     128     159 ..     107     165 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 9.8e-05
                 H.TEEEEEEESTTSSHHHHHHHHHHHTT--.- CS
        TsaE  18 l.gdvilLeGdLGaGKTtlvrglakalgve.e 47 
                 +  ++++L+G+ G+GKT l + l++++  e +
  KHJ32285.1 128 VkPNTFFLQGPAGTGKTFLYKTLCNKYRWEgK 159
                 234569******************99876654 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00013      0.17      23      49 ..     129     155 ..     112     178 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00013
      AAA_16  23 rpelvllsGesGvGKsslvrellrale 49 
                  p+  +l G++G+GK+ l ++l + ++
  KHJ32285.1 129 KPNTFFLQGPAGTGKTFLYKTLCNKYR 155
                 45899*************999987655 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00021      0.29       2      23 ..     132     153 ..     131     162 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00021
                 CEEEEC-TTTCHHHHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqklala 23 
                 + +lqG+aG GKT L + l+ +
  KHJ32285.1 132 TFFLQGPAGTGKTFLYKTLCNK 153
                 679**************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3176.19
//
Query:       KHJ32286.1  [L=158]
Description: hypothetical protein EV44_g6053 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.049   13.7   0.0      0.081   13.0   0.0    1.4  1  zf-C3HC         C3HC zinc finger-like
       0.24   11.4   2.8       0.29   11.1   2.8    1.1  1  Neur_chan_memb  Neurotransmitter-gated ion-channel transmembr


Domain annotation for each model (and alignments):
>> zf-C3HC  C3HC zinc finger-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0     9e-06     0.081      53     123 ..      59     129 ..      53     140 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 9e-06
     zf-C3HC  53 lvlklksseeesdeqlnkklaekylkqlveaHeenClWrnkecpesleslplakpeellsdlkkrldellq 123
                 l++++ s+++ ++++    lae  +++ +++H++n +  n++ p++l++lp+++ e++ls+  + +++ ++
  KHJ32286.1  59 LSFNFFSTPSILTTSSTPLLAETQENNYQTNHRHNAPLINSKEPQILFQLPIEQRERRLSNQSEPFQQHVH 129
                 55555566666666666677778888899*******************************99998887765 PP

>> Neur_chan_memb  Neurotransmitter-gated ion-channel transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   2.8   3.3e-05      0.29      99     217 ..      37     154 ..       5     156 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.3e-05
                     TTHHHHHHC--------------.------........--------------------------------SS---TTGGG-.-.....-----TT CS
  Neur_chan_memb  99 fldklprllfmkrpsevkdnekklssgass........eaeelilskskseskkaklseeqgsekastckckckegeeasp.stqlskeelspel 184
                      ++ lp+++ +++  + ++          +        +++++ +++s + + +++ ++ q +++ +   +++ke++   + + ++++++ls++ 
      KHJ32286.1  37 TIEPLPQVDTFSQSLTGER----------KnslsfnffSTPSILTTSSTPLLAETQENNYQTNHRHNAPLINSKEPQILFQlPIEQRERRLSNQS 121
                     3333344444333322222..........02222333477777777777778888888888888888888888887776551555555******* PP

                     TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Neur_chan_memb 185 kkavegvkyiadhlraededksvkedwkyvamv 217
                     +   ++v+yi  +l ++d++ + + d k  a++
      KHJ32286.1 122 EPFQQHVHYILPQLSEDDDQHRQSHDEKENASQ 154
                     *******************99999998887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       837  (0.0466841); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1251.50
//
Query:       KHJ32287.1  [L=520]
Description: putative mfs dha1 multidrug resistance protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-24   87.0  38.0    1.1e-24   87.0  38.0    1.6  2  MFS_1     Major Facilitator Superfamily
    1.3e-08   33.8   9.4    1.3e-08   33.8   9.4    1.5  1  TRI12     Fungal trichothecene efflux pump (TRI12)


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.0  38.0   1.3e-28   1.1e-24      22     346 ..      85     449 ..      59     456 .. 0.74
   2 ?   -0.5   0.8     0.052   4.7e+02     131     168 ..     441     483 ..     433     506 .. 0.55

  Alignments for each domain:
  == domain 1  score: 87.0 bits;  conditional E-value: 1.3e-28
       MFS_1  22 alaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlgagalfpagaaliadwfpkeerg 120
                  +++++ +s    ++  +l+ +g a ++l++G++++ +Gr +v++ g l+ ++++l  ++a+++ + l++r+++G+ga++++++ +a iad+f +e r+
  KHJ32287.1  85 KISSEFVVSRRIESIGSALFVFGIASGALFAGPITETVGRNPVYIGGRLIHLIFILGTALAQNISTQLICRFFAGIGASTILAIHGASIADLFGQEGRS 183
                 4567777888888888999***********************************55555779999********************************** PP

       MFS_1 121 raigllsagfslGailgpllggllasslg..Wravfyilaivsllafvlfllllpeepperkrkspkeee................kgtgpaplvp... 198
                 +a  ++++ + lG+ + p++g+++a+s    Wr++ +i+ i+s++ f++ +++lpe+  +   k ++ +                 ++  ++ +++   
  KHJ32287.1 184 LAWPFVALWSFLGTSFSPIVGAWIAQSTTvsWRWTDWIAVIMSAITFMITIIWLPETFAPILLKWKASKIrkttgnknfiapiesqSSFSKRLIINlnr 282
                 *************************666666***************99977888666666666655555586666555555443332223333333322 PP

       MFS_1 199 .awkallkdp....vlw.illialllfffgfsglltllplylqevlgls....glllaglllallalvgailallagrls.dr................ 270
                  +      +     v++  l+++++   ++++g+++ + +++ +++ +s    g   a+  +a++ +++    +l+ +++ ++                
  KHJ32287.1 283 aL----IMSTreyiVILlGLWLIVV--YIVVFGFVSGMNVLFGKTYSFSqglvGTSFAA--IAVGVILN---TMLSHYFAyQHhnrteklrnetssdsr 370
                 21....1111222122222333333..33666688888888899999997333333333..44444444...444444443335559999999999999 PP

       MFS_1 271 lgrrrrlllallllllaalglallavt....ssavllllvlvliGf.glgfvfpsllalasdlappeeagtasglfntags 346
                 l+++ rll a+++++ + ++l++l++t     s++ +l +++l+Gf  +g++++++ ++ + +    +ag+a++ ++  ++
  KHJ32287.1 371 LPPEYRLLSAFPVAFSLPISLFWLGWTnydsISPWSGLGAVALFGFsWAGIYVSIYHYIFDTYS--IYAGSALASITCGRY 449
                 999*************************99666666666*******666666666666666666..999999888877666 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.052
       MFS_1 131 slGailg.pllgg...lla.sslgWravfyilaivsllafvlf 168
                  +++ +g +l++g   +++ + +g  +v + +++++++a +l+
  KHJ32287.1 441 LASITCGrYLFAGgiqIISeDMWGALGVHWTCTLLGCIATILV 483
                 4444444444444455566666666666666666666665533 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   9.4   1.4e-12   1.3e-08      46     226 ..      62     245 ..      49     267 .. 0.85

  Alignments for each domain:
  == domain 1  score: 33.8 bits;  conditional E-value: 1.4e-12
       TRI12  46 faafslnvvatyfvlqasasalpnilqdvgqse.nsslfstlwttgqavsilvmgrltdrfgrrpfvilthilglvgaivgctatkfntllaamtllgv 143
                  a +s+nv a  +   a + a  +i  +   s   +s+ s+l+  g a   l  g +t+ +gr p+ i   ++ l+  +  + a+++ t l +  + g+
  KHJ32287.1  62 CALVSMNVFALDWCSAADSQASTKISSEFVVSRrIESIGSALFVFGIASGALFAGPITETVGRNPVYIGGRLIHLIFILGTALAQNISTQLICRFFAGI 160
                 5778*********************9997776516899**************************************9999999**************** PP

       TRI12 144 aagpaga.splfvgelmsnktkflgllivsipvvvtsglspylgqrla..iqgswrwifyiyiitsaiavllivvwyyppsfaqlh 226
                  a    a     + +l+ +  + l    v++     ++ sp +g  +a     swrw  +i +i+sai+ ++ ++w  p +fa + 
  KHJ32287.1 161 GASTILAiHGASIADLFGQEGRSLAWPFVALWSFLGTSFSPIVGAWIAqsTTVSWRWTDWIAVIMSAITFMITIIWL-PETFAPIL 245
                 9988755256789******************9999999******9886215679*********************96.66665432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       945  (0.0527079); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.40
# Mc/sec: 3875.18
//
Query:       KHJ32288.1  [L=760]
Description: putative phosphatidylinositol-4-phosphate 5-kinase its3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-97  323.6   0.0    1.6e-96  322.8   0.0    1.4  1  PIP5K     Phosphatidylinositol-4-phosphate 5-Kinase


Domain annotation for each model (and alignments):
>> PIP5K  Phosphatidylinositol-4-phosphate 5-Kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  322.8   0.0  8.9e-101   1.6e-96       2     273 ..     418     741 ..     417     742 .. 0.97

  Alignments for each domain:
  == domain 1  score: 322.8 bits;  conditional E-value: 8.9e-101
                 SS-EEEE----SSS--EEEETTSSEEEEEE-HHHHHHHHHHHHHHHHHHTT-TT--S--EEEEEEEE.ETTEEEEEEEEE-SS-TTS--SEEEEE-S-- CS
       PIP5K   2 ksalkelsseGkSgsffylteDkkfiiKtitksevkflrkllpeYyehvkenpnsLltrfyglhrvklkggkkvrfvVmenlfptdkeiheryDLKGst 100
                 k++l+el+s+GkSgsffy+++D+k+iiKti+++e+kflrk+l+eY+ hv++npn+Ll++fyglhrvk+++g+k++fvVm+nlfp++++ih+++DLKGs 
  KHJ32288.1 418 KYILSELGSPGKSGSFFYFSRDYKYIIKTIHHAEHKFLRKILKEYFAHVEANPNTLLSQFYGLHRVKMPYGRKIHFVVMNNLFPPHRDIHQTFDLKGSI 516
                 689************************************************************************************************ PP

                 TT-S--HHHH.TSSS-EEEHHHHHHHST.EEE-HHHHHHHHHHHHHHHHHHHHTTB-S-EEEEEEEB---------------------------..... CS
       PIP5K 101 vgReakkkee.ekkektlkDlDliekkeklklgkekreelleqlekDvefLeslnimDYSLLlGihnsekeekeekkesessssekesekseee..... 193
                 +gR +++++  ++ + tlkD ++ +++ +l++g+ekr+ ++eq+ekDv++L++l+imDYS+L+Gihn +  ++e+ ++++ + +++  ++ +ee     
  KHJ32288.1 517 IGRDYNEENLaTNPRATLKDVNWLRRNLHLEFGPEKRKLFFEQMEKDVSLLQKLGIMDYSMLVGIHNLQIGNQENLRDKTLQVFQPGGDNPSEEtdrgv 615
                 ******76663666778********************************************************************99998888889*** PP

                 ..............................................-----------------SEEEEESSSSEEEEEEEEE----B------------ CS
       PIP5K 194 ..............................................aseeeeeseeeedeegekakeensedgkevyylgiIDiLqkynlkKklehalk 246
                                                                +++++e  ++ d++g +a++e++++g+++++l+iID+L++y++ Kkleh++k
  KHJ32288.1 616 dgrgallrtpsklenarkarelrqiikqekpipmgqsssrmpdtlePNTSKKELLFYGDDGGFQATHEDNSPGDQIFFLSIIDCLTHYGTIKKLEHFIK 714
                 *********************************************999999999********************************************* PP

                 ----------TTHHHHHHHHHHHHHHH CS
       PIP5K 247 slkkdkksisavpPkeYaeRFlkfiek 273
                 ++k+dk+ is v P+ Y eRF++fie 
  KHJ32288.1 715 GIKYDKRLISPVSPDPYGERFVQFIEG 741
                 *************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (760 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       621  (0.0346366); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 5517.65
//
Query:       KHJ32289.1  [L=691]
Description: hypothetical protein EV44_g3486 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-05   25.5   0.6    9.7e-05   22.5   0.2    2.3  2  rve              Integrase core domain
    0.00013   21.7   1.5    0.00013   21.7   1.5    2.5  3  gag_pre-integrs  GAG-pre-integrase domain
     0.0031   17.8   0.1      0.052   13.9   0.0    2.6  2  zf-UBP           Zn-finger in ubiquitin-hydrolases and other 
  ------ inclusion threshold ------
      0.052   14.2   1.7          3    8.6   0.8    2.7  2  Zn_ribbon_2      Putative zinc ribbon domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.15   6.8e+02      76      95 ..     216     234 ..     186     238 .. 0.83
   2 !   22.5   0.2   2.2e-08   9.7e-05       5     111 ..     528     627 ..     526     634 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.15
         rve  76 seytskafrefladlgirvs 95 
                 + +t ++f++f++++ i+++
  KHJ32289.1 216 TNFT-QRFQQFIKEYEIHPT 234
                 4566.7***********985 PP

  == domain 2  score: 22.5 bits;  conditional E-value: 2.2e-08
         rve   5 gelwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpq 103
                 ++ + +D+++++  +++    +l+v+d ++r+  a  l++ ++++++ al ++ ++ + g  p+++l D g++++s++f + ++   ++ +  +    +
  KHJ32289.1 528 NYTIVIDIMYIE--GKE----MLHVIDEATRFQAAKWLDNVTSKHVWDALRQCWIDTYVGP-PDYILHDAGKTFVSREFVQNASAISTSTKSVPTKAHW 619
                 567889999999..555....999*****************88888888888899999998.*********************************99** PP

         rve 104 dnGkvErf 111
                 + G+vEr 
  KHJ32289.1 620 SIGLVERY 627
                 ******95 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.3       1.5   6.5e+03      51      63 ..     175     187 ..     160     188 .. 0.65
   2 ?   -3.0   0.2       1.6     7e+03      29      34 ..     432     437 ..     432     438 .. 0.92
   3 !   21.7   1.5   2.9e-08   0.00013      24      64 ..     465     509 ..     440     512 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.5
  gag_pre-integrs  51 lkisksevCeaCq 63 
                       +i++++ C +C 
       KHJ32289.1 175 SHIKNKKRCIVCR 187
                      3456677899996 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.6
  gag_pre-integrs  29 rRLGHp 34 
                      rR+GHp
       KHJ32289.1 432 RRFGHP 437
                      7****9 PP

  == domain 3  score: 21.7 bits;  conditional E-value: 2.9e-08
  gag_pre-integrs  24 inlWHrRLGHpsfsrlkkLfk....kgllpglkisksevCeaCql 64 
                      ++  HrR+GHps+++lk++ +    +++++ + ++  ++C++Cq+
       KHJ32289.1 465 LRCLHRRFGHPSVNSLKSILErsghDDINRAKLEQLTKFCHHCQK 509
                      5668****************9444333333333444889****96 PP

>> zf-UBP  Zn-finger in ubiquitin-hydrolases and other protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   1.2e-05     0.052      14      53 ..     183     246 ..     166     255 .. 0.77
   2 ?    0.3   0.0       0.2   9.2e+02      44      58 ..     496     510 ..     486     515 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.2e-05
                 ETTT--EEE-TTT......T-HHHHHHHHH-..................--EEEETTT--EEET CS
      zf-UBP  14 CLkCghvgCgrks......nghalkHyeetr..................Hplavdlstlsvycy 53 
                 C+ C ++gC+ ++      n+  ++++ + +                  Hp avdl++++++  
  KHJ32289.1 183 CIVCRKQGCWSSNhrkeelNEAKRQYFDKMGrptnftqrfqqfikeyeiHPTAVDLDDNETFKE 246
                 **********75545555556666666666699999999999999999***********99865 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.2
                 ETTT--EEETTTTEE CS
      zf-UBP  44 dlstlsvycyscdde 58 
                 +l++l+ +c+ c++ 
  KHJ32289.1 496 KLEQLTKFCHHCQKH 510
                 677888899999875 PP

>> Zn_ribbon_2  Putative zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.8   0.00068         3      17      68 ..     172     219 ..     165     231 .. 0.78
   2 ?    3.5   0.0     0.026   1.2e+02      21      37 ..     497     513 ..     487     558 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00068
  Zn_ribbon_2  17 teadgsksedYCkyCykdGeftepdltmeemiekcvkklaeenkelteeear 68 
                  +++ + k+++ C+ C k+G + + +   ee+ e   + +++ ++ +   +++
   KHJ32289.1 172 QNESHIKNKKRCIVCRKQGCWSS-NHRKEELNEAKRQYFDKMGRPT---NFT 219
                  5778889***************9.9999***999999999987542...333 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.026
  Zn_ribbon_2  21 gsksedYCkyCykdGef 37 
                   ++ +++C++C k+G+ 
   KHJ32289.1 497 LEQLTKFCHHCQKHGKS 513
                  566789********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (691 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       706  (0.0393775); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4707.80
//
Query:       KHJ32290.1  [L=219]
Description: hypothetical protein EV44_g3497 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.13   12.3   0.1         14    5.8   0.0    2.4  2  YqzH      YqzH-like protein


Domain annotation for each model (and alignments):
>> YqzH  YqzH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0   0.00078        14      43      55 ..      57      69 ..      38      71 .. 0.81
   2 ?    4.1   0.0    0.0027        48      35      63 ..     114     142 ..      91     143 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.00078
        YqzH 43 keqedeDlyeive 55
                +e +deDl+e+v+
  KHJ32290.1 57 TESTDEDLHELVQ 69
                6899*******95 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.0027
        YqzH  35 veriqekkkeqedeDlyeiveDivYdyvT 63 
                  e++  ++ e ++  + ei++D  ++yv 
  KHJ32290.1 114 AEALNSQYREWAKSEVEEIIKDKTFSYVS 142
                 57788999999****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1700.26
//
Query:       KHJ32291.1  [L=79]
Description: hypothetical protein EV44_g3169 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       355  (0.0198003); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.22s 00:00:00.56 Elapsed: 00:00:00.35
# Mc/sec: 670.81
//
Query:       KHJ32292.1  [L=623]
Description: hypothetical protein EV44_g5501 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.6e-127  424.3   0.0   7.2e-127  424.0   0.0    1.0  1  UPF0061   Uncharacterized ACR, YdiU/UPF0061 family


Domain annotation for each model (and alignments):
>> UPF0061  Uncharacterized ACR, YdiU/UPF0061 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  424.0   0.0    4e-131  7.2e-127      16     465 ..      60     586 ..      53     589 .. 0.87

  Alignments for each domain:
  == domain 1  score: 424.0 bits;  conditional E-value: 4e-131
     UPF0061  16 sdfydeveaaefpkkilrvrndalleelgldeeevkdeelieifgke..........kgiepflalrYhGyQFGeynpqLGDGRgfllgqvrdkd.gel 103
                 s+ ++ v+++e ++ +l++ + a  ++lg++e + ++ e+ e  +++          +g  p+ a+ Y GyQFG +++qLGDGR++ l+++ + + +  
  KHJ32292.1  60 SALFTWVRPEEKKDPELLAISPAAFKDLGIKEGDEESVEFKETVSGNrllgwdaekeTGGYPW-AQCYGGYQFGIWAGQLGDGRVISLFELTNPRtNIR 157
                 6678889999999*********************************99******987788999.***************************99773667 PP

     UPF0061 104 ydfglKGsGlTPySRsaDGrlvLksgvREvlasealhklgvrtsralslie.tgekllRedePspersavvvRlarshiRfGtferlkylkrldllkkL 201
                 y+++lKG+G TPySR+aDG++vL+s++RE+++sealh+lg++t+rals+++ + ek++Re   + e++a+v R+a+s++R+Gtf++l+ + + +l++ L
  KHJ32292.1 158 YELQLKGAGITPYSRFADGKAVLRSSIREFICSEALHALGIPTTRALSITKlPHEKVYRE---TIEPGAIVSRFAQSWLRIGTFDLLHSRGERNLIRIL 253
                 9***********************************************************...************************************ PP

     UPF0061 202 ldyvieeyypel......adee...........................ekyaqfyaelvervAelvAqWmaaGFchgVlNTDNmsilGeslDYGPyaF 267
                 + y+ e+ +  +      +  +                           +++a++y+e+v+r+A++vA+W+a+ F++gVlNTDN+si G+s+D+GP+aF
  KHJ32292.1 254 SSYIAENVFDGWeslparN--QsengdfgapvetgiekntiegpsgleeNRFARLYREIVRRNAKTVATWQAYAFTNGVLNTDNTSIYGLSMDFGPFAF 350
                 *******998875555441..1456888888888888889999999998************************************************** PP

     UPF0061 268 ldkydpkftaayfDyagrYsyanQpsiilwNLeqlaeplalli...........................eaeeleealeeykevyttkYaqlmlkkLG 339
                 ld++dp++t++++D+  rYsy+nQp+ii+wNL++l e+l  +i                           +++ +++a eey+ v++++Y++lm+++LG
  KHJ32292.1 351 LDNFDPQYTPNHDDQLSRYSYKNQPKIIWWNLMRLGESLGEMIgigpeiddpifiekgieqkaadnlisrARALITRAGEEYNAVFHAEYTRLMASRLG 449
                 ******************************************999*****999988888777666666655555556666******************* PP

     UPF0061 340 leklsekekefdselleellelLqetqvdYneffveLaeskskkwr.....deaesileese.....kelee......ekleeWrelYkklleel..ee 420
                 l++  e+  +   el +ell+ ++e ++d+n+ff++L+    +        ++++ i+ ++e     +          +++ +W + ++++++e   ++
  KHJ32292.1 450 LKTSPESDFK---ELYSELLDTMEELELDFNQFFRKLSYLSIDDLVtesqrQSKALIFFHEEgikglN---VsdvharKRIAKWLDKWRQRIAEDwgPN 542
                 *665555555...9***********************9877666552221133334433333565540...155566699********99998753345 PP

     UPF0061 421 deleeraerlkkvNpktvllrplieeviekiaeeddlsplkklle 465
                 d  + r+  ++ vNp++++++++++evi+++ +  d + l+++l+
  KHJ32292.1 543 DYDKPRQFAMRLVNPNFIPRSWILDEVIKRV-TAGDKEVLSRVLN 586
                 66677888999*******************5.5566677776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (623 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.37
# Mc/sec: 5097.87
//
Query:       KHJ32293.1  [L=688]
Description: putative eukaryotic translation initiation factor 2a protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-81  272.3   0.0    1.9e-79  266.1   0.0    2.7  3  eIF2A     Eukaryotic translation initiation factor eIF2A
    0.00044   21.0   0.3        1.5    9.8   0.0    4.8  4  WD40      WD domain, G-beta repeat
  ------ inclusion threshold ------
        3.5    8.1   9.2       0.39   11.2   0.1    2.6  2  CDV3      Carnitine deficiency-associated protein 3
        8.5    7.3  11.2         21    6.0  11.2    1.6  1  FDF       FDF domain


Domain annotation for each model (and alignments):
>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.49   2.2e+03     144     158 ..      35      49 ..      17      58 .. 0.83
   2 ?    3.1   0.0     0.017        78      91     160 ..      64      90 ..      34     100 .. 0.67
   3 !  266.1   0.0   4.2e-83   1.9e-79       1     194 []     216     410 ..     216     410 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.49
                 TT--EEEE-TTSSEE CS
       eIF2A 144 anatlvewspdgryv 158
                  n+  + +sp+g+y+
  KHJ32293.1  35 GNCRCCTYSPCGQYF 49 
                 5788999******98 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.017
                 SCEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--EEEE-TTSSEEEE CS
       eIF2A  91 kvkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanatlvewspdgryvlT 160
                 ++kv+++l+  + N i fsp+g ++                                           +T
  KHJ32293.1  64 EGKVVTSLKIPNVNEIGFSPRGSYL-------------------------------------------IT 90 
                 3555555555555555555555555...........................................44 PP

  == domain 3  score: 266.1 bits;  conditional E-value: 4.2e-83
                 EEESSECEEEEEE-TTTTEEEEEEE.E--TT-CEEEEEEEEEESSSTT--EEECCEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECSCEEEEEEE CS
       eIF2A   1 ksffkadkvklkWnkkGtsllvlvstevdktnksyygetelyliklkkkksevvelkkegpihdvaWspkskefaviyGkmpakvslfdlkvkviskle 99 
                 k+ffk dkv+lkWn++Gt+l+vl++tevdkt+ksyyget+ly+++++++ +++++l+kegpihdv+Wsp+skef viyG+mpak+++f++++ +++++ 
  KHJ32293.1 216 KTFFKGDKVQLKWNQHGTTLIVLAQTEVDKTGKSYYGETTLYVLSANGGVDSRITLDKEGPIHDVSWSPNSKEFGVIYGYMPAKTTIFNSRATATHSFP 314
                 89************************************************************************************************* PP

                 EES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT.TTEEEEEEE-TT--EEEE-TTSSEEEEEE-TTT-SSS-EEEEEETTTEEEEEEE-TTEEEE CS
       eIF2A 100 eqkrNtiffspkgklvllaGfgnlaGeleiwdvk.kkkkiakaeaanatlvewspdgryvlTattaprlrvdngfkiwsysGklvykkefdelyqv 194
                  ++rNti+fsp+g++vl+aGfgnlaG+++i+d + ++kki ++e  n +++ewspd+ry+lTatt+prlrvdng++iw++ G+++y++++ elyqv
  KHJ32293.1 315 LSPRNTILFSPSGRFVLVAGFGNLAGQMDIYDLEkNYKKICTIEGGNPSVCEWSPDSRYILTATTSPRLRVDNGVRIWHVGGSIMYNQDMVELYQV 410
                 ********************************999***********************************************************97 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.17   7.4e+02      13      27 ..      68      90 ..      26     109 .. 0.74
   2 ?    1.4   0.0      0.15   6.9e+02      12      23 ..     276     287 ..     256     290 .. 0.85
   3 ?    1.1   0.0      0.19   8.7e+02      15      28 ..     320     334 ..     308     345 .. 0.78
   4 !    9.8   0.0   0.00033       1.5      16      37 ..     364     392 ..     346     393 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.17
                EEEEE........EETTSSEEEE CS
        WD40 13 vtsla........fspdgawlas 27
                vtsl+        fsp g++l++
  KHJ32293.1 68 VTSLKipnvneigFSPRGSYLIT 90
                46666666666668888888765 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.15
                 SEEEEEEETTSS CS
        WD40  12 svtslafspdga 23 
                 +++++++sp+++
  KHJ32293.1 276 PIHDVSWSPNSK 287
                 59*******986 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.19
                 EEEEETTSSEEE.EE CS
        WD40  15 slafspdgawla.sG 28 
                  + fsp+g++++ +G
  KHJ32293.1 320 TILFSPSGRFVLvAG 334
                 577*******75255 PP

  == domain 4  score: 9.8 bits;  conditional E-value: 0.00033
                 EE.EETTSSEEEEEET......TSEEEEE CS
        WD40  16 la.fspdgawlasGsd......DgtvriW 37 
                 ++ +spd++++++++       D+ vriW
  KHJ32293.1 364 VCeWSPDSRYILTATTsprlrvDNGVRIW 392
                 456********98853344556******* PP

>> CDV3  Carnitine deficiency-associated protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   8.7e-05      0.39      82     118 ..     443     480 ..     413     484 .. 0.75
   2 ?   -1.5   4.5      0.72   3.2e+03      29     108 ..     529     607 ..     519     629 .. 0.56

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 8.7e-05
        CDV3  82 vpeeaktsgvYrPPaarntttake.rrkrkqaaPeits 118
                 v+++ k++g+YrPP+ar t t  + +r+ + +a  i s
  KHJ32293.1 443 VKTPSKSAGAYRPPGARGTSTPLHfKREDEGGAAYIVS 480
                 5566699***********99866677777777766665 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.72
        CDV3  29 eekeeeeeeekeeegeageelk..vstdkssgPWnksaaaeqpaaeetkpveeepvpeeaktsgvYrPPaarntttake.rrk 108
                 ++k+ e ++ ke +  a+e l+    +d +  P ++  + +q++    ++ + +p++++    +v++  +ar +  +++ + +
  KHJ32293.1 529 NKKKREAKKAKEADAKASEALNihDKQDDHITPERRDFVRNQSKG---QQHTRAPSQQR-YRNNVFQSGGARSNILQAQnQSQ 607
                 333333333444444455555444556777778777755555554...34444555444.67778888888776554443223 PP

>> FDF  FDF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0  11.2    0.0047        21      21      87 ..     522     588 ..     519     620 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0047
                 HCCHHHCC-XXXXXXXXXX..XXXXXXXXXXXXXXXXXXXBXXBXXXXXXXEEEXTTXXEEEXXXHH CS
         FDF  21 vfeellkkaklkeeklaknenaatatatneqpgekvegvdkkksffDkiSsegnergaqeheseedd 87 
                 + + +lk++k+ e+k+ak++ a++++a n + ++   +  ++ +f+ + S+ ++ ++a+++++  ++
  KHJ32293.1 522 LSKTALKNKKKREAKKAKEADAKASEALNIHDKQDDHITPERRDFVRNQSKGQQHTRAPSQQRYRNN 588
                 66788999999999****9*****************************************9887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (688 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1085  (0.0605165); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.24s 00:00:00.87 Elapsed: 00:00:00.38
# Mc/sec: 5432.79
//
Query:       KHJ32294.1  [L=607]
Description: putative wd40 repeat-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (607 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       284  (0.0158403); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.36
# Mc/sec: 5055.52
//
Query:       KHJ32295.1  [L=265]
Description: hypothetical protein EV44_g1239 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        1.3    9.2   4.6          2    8.6   4.6    1.3  1  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   4.6   0.00011         2       1      10 [.     255     264 ..     255     264 .. 0.89

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00011
                 SCTSSSSSSS CS
     zf-CCHC   1 rkCynCGepG 10 
                 ++CynCG+ G
  KHJ32295.1 255 GTCYNCGKKG 264
                 58*****998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       788  (0.0439511); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 1931.42
//
Query:       KHJ32296.1  [L=258]
Description: putative te1b-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-05   25.3   0.0    3.2e-05   24.2   0.0    1.6  1  RNase_H   RNase H


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   1.8e-09   3.2e-05      49     142 ..      16      93 ..       4      94 .. 0.62

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1.8e-09
                 HHHHHHHHTT.SCSEEEEEES-HHHHHHHHCCCHHHHHTTSSSETTSSBHTTHHHHHHHHHCHCSSEEEEEE-SCCSSSTHHHHHHHHHHHHHH CS
     RNase_H  49 sAvieaLkalksdekvniytDSkYvvkgitqwvhrwkknawkttseqkpvknkdlaellkelakkkkvqlkwvkgHaGvpkgNemaDrlAkeaa 142
                 +A+++a+++ ++++ +++  D++ +v ++ +        ++ +ts+    k  d++  l +++  +++++kw++ H+ + +gN +aD+lAk+a+
  KHJ32296.1  16 KALVTAVET-DRSNPIKLLLDCRTTVRALCT--------GQAKTSQA---KI-DMFLDLAQTC--RDLEVKWIPSHSKI-YGNVTADKLAKSAL 93 
                 344444443.455777777777777775544........22222222...22.3333333334..589***********.9**********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       488  (0.0272185); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 2001.27
//
Query:       KHJ32297.1  [L=106]
Description: putative 60s ribosomal protein l44 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-36  125.1  11.9    1.6e-36  124.6  11.9    1.3  1  Ribosomal_L44  Ribosomal protein L44
  ------ inclusion threshold ------
      0.094   13.0   0.8      0.094   13.0   0.8    1.6  2  Cathelicidins  Cathelicidin


Domain annotation for each model (and alignments):
>> Ribosomal_L44  Ribosomal protein L44
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.6  11.9   1.8e-40   1.6e-36       1      76 []      19      94 ..      19      94 .. 0.99

  Alignments for each domain:
  == domain 1  score: 124.6 bits;  conditional E-value: 1.8e-40
                   EEEEEEEEE-------SSSHHHHHHHH.H-SSSGGGGS----.--SSBB--EEEEETTT--EEE----BBS--EEE CS
  Ribosomal_L44  1 kHtehkveqykkgkdselaqgkRrydrkqsgygGqtkpvfkkkaKttKKivlrleCteCkkkrlkalkRakkfelv 76
                   kHt+hkv+qyk+gk+s +aqgkRrydrkqsgygGqtkpvf+kkaKttKK+vlrleCt Ck+k ++alkR+k+fel+
     KHJ32297.1 19 KHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKTKAQLALKRCKHFELG 94
                   8*************************************************************************95 PP

>> Cathelicidins  Cathelicidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1      0.45     4e+03      51      64 ..      12      25 ..       3      35 .. 0.63
   2 ?   13.0   0.8   1.1e-05     0.094      35      81 ..      56     102 ..      52     105 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.45
                   EEEEEEETT--S-G CS
  Cathelicidins 51 vketvCprttqqqp 64
                    k  +C + tq++ 
     KHJ32297.1 12 CKGKDCKKHTQHKV 25
                   45566666666554 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 1.1e-05
                    XXXXSXTTSXEEEEEEEEEEEEETT--S-GGGSXBXTTXXEEEEEEE CS
  Cathelicidins  35 pkededpktpkpvsfrvketvCprttqqqpeqCdfkedGlvkrCvGt 81 
                    p   +++kt k+v  r+  tvC    q   ++C   e G  k+ +G+
     KHJ32297.1  56 PVFHKKAKTTKKVVLRLECTVCKTKAQLALKRCKHFELGGDKKTKGA 102
                    5567899***************************9999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 859.60
//
Query:       KHJ32298.1  [L=621]
Description: putative mitochondrial outer membrane 72k protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.5e-47  155.3  17.6    1.1e-05   25.0   0.0   11.4 11  TPR_1      Tetratricopeptide repeat
    2.3e-43  142.8  15.9    4.4e-05   23.3   0.0   11.5 11  TPR_2      Tetratricopeptide repeat
    2.9e-24   83.2  14.0     0.0016   18.5   0.0   10.4 10  TPR_8      Tetratricopeptide repeat
    1.1e-23   82.6  20.1    6.6e-06   25.7   0.2    9.1  9  TPR_11     TPR repeat
    4.7e-23   81.6   3.5    3.3e-05   24.4   0.1    6.7  7  TPR_16     Tetratricopeptide repeat
    1.6e-18   66.8  22.5    0.00031   21.0   0.1    8.1  8  TPR_12     Tetratricopeptide repeat
    4.9e-18   64.1  10.9     0.0012   19.1   0.0    9.1  9  TPR_17     Tetratricopeptide repeat
    1.6e-16   60.2   6.2    4.6e-05   23.5   0.0    6.5  7  TPR_9      Tetratricopeptide repeat
    2.6e-15   55.8  13.1      0.059   14.2   0.0    9.1 10  TPR_14     Tetratricopeptide repeat
    1.3e-14   54.4  16.3    2.9e-05   24.5   2.0    6.1  6  TPR_19     Tetratricopeptide repeat
    2.1e-13   49.3  19.0     0.0095   15.9   0.4    9.9 10  TPR_7      Tetratricopeptide repeat
    5.4e-09   35.6  17.4      0.044   13.7   1.0    8.2  9  TPR_10     Tetratricopeptide repeat
    2.7e-08   33.9  10.7       0.07   13.4   0.6    5.4  5  ANAPC3     Anaphase-promoting complex, cyclosome, subunit 3
    3.3e-08   33.3   2.7    2.3e-07   30.5   2.6    2.3  1  TPR_MalT   MalT-like TPR region
    1.2e-07   31.0   9.7       0.28   10.7   0.1    7.0  8  SHNi-TPR   SHNi-TPR
    4.5e-05   22.8   5.9       0.51    9.5   1.8    4.1  4  TPR_15     Tetratricopeptide repeat
    0.00037   20.9  23.2        3.6    8.4   0.0    9.5 10  TPR_6      Tetratricopeptide repeat
     0.0006   20.3   1.2        8.9    6.7   0.3    4.3  4  BTAD       Bacterial transcriptional activator domain
     0.0082   16.2   5.7        2.3    8.4   0.3    4.3  4  MAS20      MAS20 protein import receptor
  ------ inclusion threshold ------
      0.031   13.7   0.5      0.031   13.7   0.5    2.0  3  TAF1_subA  TAF RNA Polymerase I subunit A
      0.047   13.8   9.3        2.2    8.4   0.1    4.4  3  ANAPC5     Anaphase-promoting complex subunit 5
      0.049   14.3   1.8        1.3    9.9   0.1    3.8  3  Sel1       Sel1 repeat
      0.094   12.8  14.3        5.7    7.1   0.6    6.4  7  MIT        MIT (microtubule interacting and transport) domain
       0.12   12.7   2.6        3.5    8.0   0.1    3.7  2  TPR_20     Tetratricopeptide repeat
        5.2    5.9  13.7        2.9    6.7   0.0    4.4  5  NARP1      NMDA receptor-regulated protein 1


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.1   0.00059      0.43       8      33 ..     140     165 ..     136     166 .. 0.91
   2 !   14.4   0.1   3.5e-05     0.025       3      34 .]     168     199 ..     166     199 .. 0.93
   3 !   18.3   0.0     2e-06    0.0014       1      25 [.     200     224 ..     200     230 .. 0.92
   4 !    6.8   0.1     0.009       6.5      17      30 ..     316     329 ..     316     330 .. 0.97
   5 !   13.7   0.0     6e-05     0.043       1      33 [.     337     369 ..     337     370 .. 0.95
   6 !   15.3   0.0   1.8e-05     0.013       3      33 ..     373     403 ..     371     404 .. 0.90
   7 !   25.0   0.0   1.6e-08   1.1e-05       2      34 .]     406     438 ..     405     438 .. 0.94
   8 ?    3.8   0.0     0.079        56       4      29 ..     442     467 ..     439     471 .. 0.90
   9 !   15.6   0.2   1.5e-05     0.011       2      34 .]     474     506 ..     473     506 .. 0.88
  10 !   15.0   0.1   2.3e-05     0.017      11      32 ..     524     545 ..     516     547 .. 0.87
  11 !   18.3   0.1   2.1e-06    0.0015       7      32 ..     554     579 ..     550     581 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00059
                 HHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   8 GnayfklgkydeAleyyekALelnPn 33 
                 Gn+ f  +++ +A++ y +A+   P+
  KHJ32298.1 140 GNTAFGAKDFPKAIKLYGQAILCKPD 165
                 89999****************88887 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 3.5e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPnn 34 
                  + n++++y  l ++++ +e+   AL ln ++
  KHJ32298.1 168 FYSNRAACYNALREWEKVVEDTTAALNLNSEY 199
                 599*************************9875 PP

  == domain 3  score: 18.3 bits;  conditional E-value: 2e-06
                 HHHHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_1   1 akalynlGnayfklgkydeAleyye 25 
                 +kal++++ ay +l+k+ eAl ++ 
  KHJ32298.1 200 VKALNRRAIAYEQLNKFSEALLDFT 224
                 58*******************9996 PP

  == domain 4  score: 6.8 bits;  conditional E-value: 0.009
                 HHHHHHHHHHHHHH CS
       TPR_1  17 ydeAleyyekALel 30 
                 y+eA  ++++ALel
  KHJ32298.1 316 YEEAATAFRRALEL 329
                 9************8 PP

  == domain 5  score: 13.7 bits;  conditional E-value: 6e-05
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnPn 33 
                 a a++ +G   +  g+  eA+++  k ++l+P+
  KHJ32298.1 337 AFAYNMRGTFRYLSGESSEAIDDLTKSITLQPE 369
                 679****************************97 PP

  == domain 6  score: 15.3 bits;  conditional E-value: 1.8e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnPn 33 
                 ++  ++ +y++lg+   A++++e A++ n +
  KHJ32298.1 373 SYVKRASMYLELGDKGAAVKDFENAIQQNND 403
                 67889**********************9965 PP

  == domain 7  score: 25.0 bits;  conditional E-value: 1.6e-08
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 +++y +++++f lg++ +A ++y++ + l++++
  KHJ32298.1 406 DIFYHRAQLHFILGEFADAAKDYQRSIDLDHTF 438
                 789***************************986 PP

  == domain 8  score: 3.8 bits;  conditional E-value: 0.079
                 HHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALe 29 
                 + +lG++ +k+g      + ++++++
  KHJ32298.1 442 HIQLGVTQYKMGSIASSMATFRRCIK 467
                 789***********999999999997 PP

  == domain 9  score: 15.6 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 ++++  G +++ ++k++eA+e ++ A+e++ +n
  KHJ32298.1 474 DVYNYYGEILLDQQKFQEAIEKFDTAIEIEKKN 506
                 56777799*********************9876 PP

  == domain 10  score: 15.0 bits;  conditional E-value: 2.3e-05
                 HHHTT-HHHHHHHHHHHHHHST CS
       TPR_1  11 yfklgkydeAleyyekALelnP 32 
                 ++ ++++ eA++ +++AL+++P
  KHJ32298.1 524 FQWNQDFSEAEKLCQQALSIDP 545
                 567889***************9 PP

  == domain 11  score: 18.3 bits;  conditional E-value: 2.1e-06
                 HHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   7 lGnayfklgkydeAleyyekALelnP 32 
                 ++++++++gk  eAl+y+e+A el  
  KHJ32298.1 554 MAQLLLQQGKVSEALQYFERAAELAR 579
                 799*******************9975 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   0.00036      0.26       6      33 ..     138     165 ..     133     166 .. 0.89
   2 ?    5.5   0.1     0.031        22       2      33 ..     167     198 ..     166     199 .. 0.92
   3 !   14.8   0.0   3.2e-05     0.023       2      28 ..     201     227 ..     200     231 .. 0.89
   4 !    8.3   0.2    0.0038       2.7      17      30 ..     316     329 ..     316     331 .. 0.96
   5 !   10.5   0.0   0.00073      0.53       1      33 [.     337     369 ..     337     370 .. 0.95
   6 !   13.9   0.0   6.1e-05     0.043       4      34 .]     374     404 ..     372     404 .. 0.91
   7 !   20.5   0.0   4.7e-07   0.00034       2      32 ..     406     436 ..     405     438 .. 0.92
   8 ?    2.9   0.0      0.21   1.5e+02       3      30 ..     441     468 ..     439     471 .. 0.89
   9 !   23.3   0.0   6.1e-08   4.4e-05       1      34 []     473     506 ..     473     506 .. 0.94
  10 !   11.3   0.0   0.00041      0.29      14      32 ..     527     545 ..     516     547 .. 0.91
  11 !   19.6   0.2     9e-07   0.00065       6      32 ..     553     579 ..     549     581 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00036
       TPR_2   6 nlGlayyklgdyeeAleafekAleldPn 33 
                   G+ ++ ++d+ +A++++ +A+   P+
  KHJ32298.1 138 LAGNTAFGAKDFPKAIKLYGQAILCKPD 165
                 6799*******************98886 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.031
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPn 33 
                   + n++ +y +l ++e+ +e+  +Al l+ +
  KHJ32298.1 167 IFYSNRAACYNALREWEKVVEDTTAALNLNSE 198
                 5799*************************965 PP

  == domain 3  score: 14.8 bits;  conditional E-value: 3.2e-05
       TPR_2   2 ealynlGlayyklgdyeeAleafekAl 28 
                 +al++++ ay++l+++ eAl +f ++ 
  KHJ32298.1 201 KALNRRAIAYEQLNKFSEALLDFTASC 227
                 79*******************998765 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.0038
       TPR_2  17 yeeAleafekAlel 30 
                 yeeA+ af++Alel
  KHJ32298.1 316 YEEAATAFRRALEL 329
                 9***********98 PP

  == domain 5  score: 10.5 bits;  conditional E-value: 0.00073
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPn 33 
                 a a++++G   y +g+  eA++++ k++ l P+
  KHJ32298.1 337 AFAYNMRGTFRYLSGESSEAIDDLTKSITLQPE 369
                 689****************************97 PP

  == domain 6  score: 13.9 bits;  conditional E-value: 6.1e-05
       TPR_2   4 lynlGlayyklgdyeeAleafekAleldPnn 34 
                 +  ++  y++lgd   A+++fe A++ + ++
  KHJ32298.1 374 YVKRASMYLELGDKGAAVKDFENAIQQNNDD 404
                 678999********************99875 PP

  == domain 7  score: 20.5 bits;  conditional E-value: 4.7e-07
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldP 32 
                 ++ y ++++++ lg++++A++++++++ ld 
  KHJ32298.1 406 DIFYHRAQLHFILGEFADAAKDYQRSIDLDH 436
                 678*************************995 PP

  == domain 8  score: 2.9 bits;  conditional E-value: 0.21
       TPR_2   3 alynlGlayyklgdyeeAleafekAlel 30 
                  + +lG   yk+g  +   + f+++++ 
  KHJ32298.1 441 SHIQLGVTQYKMGSIASSMATFRRCIKN 468
                 5889********************9985 PP

  == domain 9  score: 23.3 bits;  conditional E-value: 6.1e-08
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPnn 34 
                 ++++++ G++++ +++++eA+e f+ A+e++ +n
  KHJ32298.1 473 PDVYNYYGEILLDQQKFQEAIEKFDTAIEIEKKN 506
                 579***************************9876 PP

  == domain 10  score: 11.3 bits;  conditional E-value: 0.00041
       TPR_2  14 lgdyeeAleafekAleldP 32 
                 ++d+ eA++++++Al++dP
  KHJ32298.1 527 NQDFSEAEKLCQQALSIDP 545
                 689***************9 PP

  == domain 11  score: 19.6 bits;  conditional E-value: 9e-07
       TPR_2   6 nlGlayyklgdyeeAleafekAleldP 32 
                  ++++++++g+  eAl++fe+A el+ 
  KHJ32298.1 553 TMAQLLLQQGKVSEALQYFERAAELAR 579
                 689*********************986 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       2.1   1.5e+03       8      31 ..     140     163 ..     138     166 .. 0.79
   2 ?    4.2   0.0     0.083        59       2      23 ..     201     222 ..     200     227 .. 0.86
   3 ?    3.4   0.1      0.16   1.1e+02      17      30 ..     316     329 ..     316     330 .. 0.96
   4 ?    5.7   0.0     0.029        21       3      33 ..     339     369 ..     339     370 .. 0.91
   5 !   18.5   0.0   2.3e-06    0.0016       2      33 ..     372     403 ..     371     404 .. 0.92
   6 !   10.9   0.0   0.00061      0.43       2      31 ..     406     435 ..     405     437 .. 0.94
   7 !    7.5   0.0    0.0075       5.4       5      29 ..     443     467 ..     441     469 .. 0.93
   8 !   10.1   0.1    0.0011      0.79       3      34 .]     475     506 ..     473     506 .. 0.91
   9 ?    7.0   0.0     0.011       7.7      15      32 ..     528     545 ..     516     547 .. 0.84
  10 !   13.7   0.1   7.6e-05     0.054       6      32 ..     553     579 ..     550     581 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 2.1
                 HHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8   8 gsiylklgdyeeAkeyyekaleld 31 
                 g++ +  +d+ +A++ y +a+  +
  KHJ32298.1 140 GNTAFGAKDFPKAIKLYGQAILCK 163
                 777888899999*****9999655 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.083
                 CHHHHHHHHHHHTT-HHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkey 23 
                 +a+++ + +y++l+++ eA   
  KHJ32298.1 201 KALNRRAIAYEQLNKFSEALLD 222
                 7999**************9755 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.16
                 HHHHHHHHHHHHHH CS
       TPR_8  17 yeeAkeyyekalel 30 
                 yeeA  ++++alel
  KHJ32298.1 316 YEEAATAFRRALEL 329
                 8***********97 PP

  == domain 4  score: 5.7 bits;  conditional E-value: 0.029
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ay++ g      g+  eA+  + k ++l+p+
  KHJ32298.1 339 AYNMRGTFRYLSGESSEAIDDLTKSITLQPE 369
                 688889999999*****************96 PP

  == domain 5  score: 18.5 bits;  conditional E-value: 2.3e-06
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ++y++ +s yl+lgd+ +A++ +e a++ + d
  KHJ32298.1 372 QSYVKRASMYLELGDKGAAVKDFENAIQQNND 403
                 79*************************98776 PP

  == domain 6  score: 10.9 bits;  conditional E-value: 0.00061
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleld 31 
                 ++ y+ +++++ lg++  A + y++ ++ld
  KHJ32298.1 406 DIFYHRAQLHFILGEFADAAKDYQRSIDLD 435
                 5789***********************998 PP

  == domain 7  score: 7.5 bits;  conditional E-value: 0.0075
                 HHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyyekale 29 
                  +lg +  k+g + +++++++++++
  KHJ32298.1 443 IQLGVTQYKMGSIASSMATFRRCIK 467
                 689********************97 PP

  == domain 8  score: 10.1 bits;  conditional E-value: 0.0011
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 +y+  g i+l++++++eA+e +  a+e++++n
  KHJ32298.1 475 VYNYYGEILLDQQKFQEAIEKFDTAIEIEKKN 506
                 677789**********************9986 PP

  == domain 9  score: 7.0 bits;  conditional E-value: 0.011
                 T-HHHHHHHHHHHHHHHH CS
       TPR_8  15 gdyeeAkeyyekaleldp 32 
                 +d+ eA++ +++al++dp
  KHJ32298.1 528 QDFSEAEKLCQQALSIDP 545
                 6899*************9 PP

  == domain 10  score: 13.7 bits;  conditional E-value: 7.6e-05
                 HHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyyekaleldp 32 
                  +++++l++g+  eA +y+e+a el++
  KHJ32298.1 553 TMAQLLLQQGKVSEALQYFERAAELAR 579
                 589*********************997 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.1    0.0053       3.8       8      38 ..     147     176 ..     140     179 .. 0.78
   2 ?    6.4   0.3      0.01       7.3      19      41 ..     191     213 ..     190     214 .. 0.94
   3 ?    4.8   0.0     0.032        23      10      23 ..     316     329 ..     315     330 .. 0.96
   4 !    6.7   0.0    0.0082       5.9       5      42 .]     348     385 ..     346     385 .. 0.93
   5 !   25.7   0.2   9.2e-09   6.6e-06       3      40 ..     380     417 ..     378     419 .. 0.93
   6 !   21.5   0.0   1.9e-07   0.00014       4      42 .]     415     453 ..     413     453 .. 0.96
   7 !   15.2   0.1   1.8e-05     0.013       1      27 [.     480     506 ..     480     508 .. 0.94
   8 ?   -0.7   0.0       1.6   1.2e+03      18      25 ..     538     545 ..     528     546 .. 0.80
   9 !    6.8   0.8    0.0074       5.3       3      34 ..     557     588 ..     555     591 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0053
      TPR_11   8 GkyeeAieaYkkAlkldPdnaeayynLGlay 38 
                  ++++Ai+ Y +A+  +P ++ +y+n+++ y
  KHJ32298.1 147 KDFPKAIKLYGQAILCKP-DPIFYSNRAACY 176
                 5799**********5555.588888888655 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.01
      TPR_11  19 kAlkldPdnaeayynLGlayykq 41 
                 +Al+l+++++ a++ ++ ay ++
  KHJ32298.1 191 AALNLNSEYVKALNRRAIAYEQL 213
                 59******************987 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.032
      TPR_11  10 yeeAieaYkkAlkl 23 
                 yeeA +a+++Al+l
  KHJ32298.1 316 YEEAATAFRRALEL 329
                 9***********98 PP

  == domain 4  score: 6.7 bits;  conditional E-value: 0.0082
      TPR_11   5 yeqGkyeeAieaYkkAlkldPdnaeayynLGlayykqG 42 
                 y  G+  eAi ++ k + l P+    y +++  y+++G
  KHJ32298.1 348 YLSGESSEAIDDLTKSITLQPELTQSYVKRASMYLELG 385
                 6689999************************9999998 PP

  == domain 5  score: 25.7 bits;  conditional E-value: 9.2e-09
      TPR_11   3 ayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayyk 40 
                 +y e+G+  +A++++++A++ ++d+++++y+++++++ 
  KHJ32298.1 380 MYLELGDKGAAVKDFENAIQQNNDDPDIFYHRAQLHFI 417
                 799*******************************9985 PP

  == domain 6  score: 21.5 bits;  conditional E-value: 1.9e-07
      TPR_11   4 yyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykqG 42 
                  + +G++ +A ++Y++ ++ld ++   +  LG+++yk+G
  KHJ32298.1 415 HFILGEFADAAKDYQRSIDLDHTFIFSHIQLGVTQYKMG 453
                 6889**********************************9 PP

  == domain 7  score: 15.2 bits;  conditional E-value: 1.8e-05
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdn 27 
                 G ++ +q+k+ eAie++ +A+++  +n
  KHJ32298.1 480 GEILLDQQKFQEAIEKFDTAIEIEKKN 506
                 889********************9887 PP

  == domain 8  score: -0.7 bits;  conditional E-value: 1.6
      TPR_11  18 kkAlkldP 25 
                 ++Al +dP
  KHJ32298.1 538 QQALSIDP 545
                 89*****9 PP

  == domain 9  score: 6.8 bits;  conditional E-value: 0.0074
      TPR_11   3 ayyeqGkyeeAieaYkkAlkldPdnaeayynL 34 
                 ++ +qGk  eA++ +++A +l  +  e++++L
  KHJ32298.1 557 LLLQQGKVSEALQYFERAAELARTENEILNAL 588
                 689****************9977776666665 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0059       4.2       3      50 ..     139     182 ..     138     184 .. 0.81
   2 ?    4.7   0.0     0.069        50      22      57 ..     191     223 ..     186     230 .. 0.84
   3 !    8.3   0.1    0.0052       3.7      13      57 ..     316     360 ..     314     370 .. 0.77
   4 !   24.4   0.1   4.7e-08   3.3e-05       5      61 ..     379     432 ..     375     435 .. 0.84
   5 !   14.2   0.0   7.5e-05     0.054       6      61 ..     448     500 ..     443     506 .. 0.87
   6 !   15.5   0.3   2.9e-05      0.02      10      64 ..     527     578 ..     517     582 .. 0.86
   7 !   11.8   1.0   0.00042       0.3       3      31 ..     554     579 ..     552     599 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0059
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrl 50 
                 +++ a+ a+d+++A++++ +a+      P ++ ++ +++ ++ ++ ++
  KHJ32298.1 139 AGNTAFGAKDFPKAIKLYGQAILCK---P-DPIFYSNRAACYNALREW 182
                 6899**************7776666...5.788999999988887776 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.069
      TPR_16  22 aalkrdpssPdaaeAllllgdaalrqgrlaeAaaly 57 
                 aal ++   ++ + Al+ ++ a+ +++ + eA+  +
  KHJ32298.1 191 AALNLN---SEYVKALNRRAIAYEQLNKFSEALLDF 223
                 778888...9999*******************9444 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.0052
      TPR_16  13 yddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaaly 57 
                 y++Aa a+++al+++      a A++ +g  ++  g+  eA++ +
  KHJ32298.1 316 YEEAATAFRRALELGDLGDYEAFAYNMRGTFRYLSGESSEAIDDL 360
                 9**************444448888888888888888888888433 PP

  == domain 4  score: 24.4 bits;  conditional E-value: 4.7e-08
      TPR_16   5 raalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraal 61 
                   +l++gd  +A++ +e a+ ++    d+++  ++++++++ +g++a+Aa  y++ +
  KHJ32298.1 379 SMYLELGDKGAAVKDFENAIQQN---NDDPDIFYHRAQLHFILGEFADAAKDYQRSI 432
                 5599*******************...6666699999999999999999997777655 PP

  == domain 5  score: 14.2 bits;  conditional E-value: 7.5e-05
      TPR_16   6 aalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraal 61 
                   ++ g  +   a +++ +k++      ++ ++++g+++l q+ ++eA++ ++ a+
  KHJ32298.1 448 TQYKMGSIASSMATFRRCIKNF---DNVPDVYNYYGEILLDQQKFQEAIEKFDTAI 500
                 5678888888999999999***...88999*******************9999987 PP

  == domain 6  score: 15.5 bits;  conditional E-value: 2.9e-05
      TPR_16  10 agdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraa 64 
                 ++d+ +A+++ ++al  d   P +  A    ++++l+qg + eA++++++a++ a
  KHJ32298.1 527 NQDFSEAEKLCQQALSID---PMCDIAIATMAQLLLQQGKVSEALQYFERAAELA 578
                 567999999999999999...9999999999999999999999999999998776 PP

  == domain 7  score: 11.8 bits;  conditional E-value: 0.00042
      TPR_16   3 laraalragdyddAaaaleaalkrdpssP 31 
                 +a+++l++g+  +A+ ++e+a +++    
  KHJ32298.1 554 MAQLLLQQGKVSEALQYFERAAELA---R 579
                 6899999999999999999999888...3 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.086        61      37      71 ..     125     159 ..     119     161 .. 0.70
   2 !    9.6   0.4    0.0016       1.1      12      68 ..     175     223 ..     167     227 .. 0.73
   3 !   12.4   0.3    0.0002      0.14      19      75 ..     316     367 ..     313     369 .. 0.90
   4 !    9.8   0.3    0.0013      0.94       5      74 ..     373     434 ..     369     436 .. 0.85
   5 !    7.9   0.0    0.0054       3.8       6      33 ..     408     435 ..     403     470 .. 0.68
   6 !   21.0   0.1   4.3e-07   0.00031       4      75 ..     474     544 ..     471     546 .. 0.92
   7 !   20.9   2.2   4.7e-07   0.00033       7      76 ..     517     579 ..     511     580 .. 0.88
   8 !   16.4   1.6   1.1e-05    0.0081       4      35 ..     551     580 ..     546     600 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.086
      TPR_12  37 lGpdhpltattlrnLgrlyralgryeeAlelleea 71 
                  + d+ ++a+ l   g + + ++++ +A++l+ +a
  KHJ32298.1 125 SEQDKIDLASKLKLAGNTAFGAKDFPKAIKLYGQA 159
                 55566677777777888888888888888888777 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0016
      TPR_12  12 vlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlell 68 
                 ++        Al+  ek++e  +++l+ ++ +++ +l+  +++y++l+++ eAl  +
  KHJ32298.1 175 CY-------NALREWEKVVEDTTAALNLNS-EYVKALNRRAIAYEQLNKFSEALLDF 223
                 44.......456666666666666666666.6799******************9766 PP

  == domain 3  score: 12.4 bits;  conditional E-value: 0.0002
      TPR_12  19 ydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                 y+eA + +++ale+   l  +d+  +a +++  g+  +++g+  eA++ l++++ + 
  KHJ32298.1 316 YEEAATAFRRALELG-DL--GDY--EAFAYNMRGTFRYLSGESSEAIDDLTKSITLQ 367
                 999***********9.34..667..***************************99876 PP

  == domain 4  score: 9.8 bits;  conditional E-value: 0.0013
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74 
                 +++++a+++++lg+   A + +e a+++       d p+   + +  ++l++ lg++++A + +++++++
  KHJ32298.1 373 SYVKRASMYLELGDKGAAVKDFENAIQQN-----NDDPD---IFYHRAQLHFILGEFADAAKDYQRSIDL 434
                 67789999999999999999999996666.....66666...7999999999999999999999999986 PP

  == domain 5  score: 7.9 bits;  conditional E-value: 0.0054
      TPR_12   6 lnnlaavlrrlgrydeAlellekaleia 33 
                  +++a++++ lg++++A + +++++++ 
  KHJ32298.1 408 FYHRAQLHFILGEFADAAKDYQRSIDLD 435
                 5678999999999999999999998887 PP

  == domain 6  score: 21.0 bits;  conditional E-value: 4.3e-07
      TPR_12   4 talnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyral.gryeeAlelleealaia 75 
                  ++n ++++l+ +++++eA+e +++a+ei ++   +     +  l+n + +++++  ++ eA++l ++al i+
  KHJ32298.1 474 DVYNYYGEILLDQQKFQEAIEKFDTAIEIEKKN--KSCGINVLPLINKALALFQWnQDFSEAEKLCQQALSID 544
                 57878*************************988..778899************999**************986 PP

  == domain 7  score: 20.9 bits;  conditional E-value: 4.7e-07
      TPR_12   7 nnlaavl.rrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaiae 76 
                  n a++l ++ +++ eA++l+++al i    + +d     ++  ++++l++++g+  eAl+++e+a ++a+
  KHJ32298.1 517 INKALALfQWNQDFSEAEKLCQQALSID---PMCD-----IAIATMAQLLLQQGKVSEALQYFERAAELAR 579
                 4788888577******************...7766.....688899**********************987 PP

  == domain 8  score: 16.4 bits;  conditional E-value: 1.1e-05
      TPR_12   4 talnnlaavlrrlgrydeAlellekaleiarr 35 
                 +a   +a++l+++g+  eAl+++e+a e+ar 
  KHJ32298.1 551 IAT--MAQLLLQQGKVSEALQYFERAAELART 580
                 333..899999999999999999999999954 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1       3.5   2.5e+03       8      24 ..     162     177 ..     155     184 .. 0.63
   2 ?    7.2   0.5      0.01       7.4       4      32 ..     191     219 ..     190     220 .. 0.91
   3 ?    3.3   0.0      0.18   1.3e+02      13      33 ..     337     357 ..     322     358 .. 0.84
   4 !   10.4   0.0   0.00097      0.69       3      33 ..     361     391 ..     359     392 .. 0.93
   5 !   11.7   0.0   0.00037      0.27       2      32 ..     394     424 ..     393     426 .. 0.94
   6 ?    7.2   0.0      0.01       7.5       2      27 ..     428     453 ..     427     458 .. 0.94
   7 !   19.1   0.0   1.6e-06    0.0012       2      34 .]     462     494 ..     461     494 .. 0.95
   8 ?   -0.7   0.0       3.4   2.5e+03       3      27 ..     497     527 ..     495     535 .. 0.69
   9 ?    1.8   0.1      0.55     4e+02      14      34 .]     549     569 ..     536     569 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 3.5
      TPR_17   8 ldPnnadaynnLAelll 24 
                 + P ++ +y n+A ++ 
  KHJ32298.1 162 CKP-DPIFYSNRAACYN 177
                 444.5777888888775 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.01
      TPR_17   4 kaleldPnnadaynnLAelllknGdlmtA 32 
                  al l+  +++a+n +A ++++++++ +A
  KHJ32298.1 191 AALNLNSEYVKALNRRAIAYEQLNKFSEA 219
                 68999******************999887 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.18
      TPR_17  13 adaynnLAelllknGdlmtAr 33 
                 a ayn+++++ +  G++ +A+
  KHJ32298.1 337 AFAYNMRGTFRYLSGESSEAI 357
                 679*************99997 PP

  == domain 4  score: 10.4 bits;  conditional E-value: 0.00097
      TPR_17   3 lkaleldPnnadaynnLAelllknGdlmtAr 33 
                 +k++ l P    +y  +A  +l++Gd++ A+
  KHJ32298.1 361 TKSITLQPELTQSYVKRASMYLELGDKGAAV 391
                 79*************************9996 PP

  == domain 5  score: 11.7 bits;  conditional E-value: 0.00037
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                 +++a++++ +++d ++ +A+l+  +G++++A
  KHJ32298.1 394 FENAIQQNNDDPDIFYHRAQLHFILGEFADA 424
                 89************************99887 PP

  == domain 6  score: 7.2 bits;  conditional E-value: 0.01
      TPR_17   2 ylkaleldPnnadaynnLAelllknG 27 
                 y+++++ld++   ++ +L+++++k G
  KHJ32298.1 428 YQRSIDLDHTFIFSHIQLGVTQYKMG 453
                 9********************99887 PP

  == domain 7  score: 19.1 bits;  conditional E-value: 1.6e-06
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtArq 34 
                 +++++++  n +d+yn+++e+ll + ++++A++
  KHJ32298.1 462 FRRCIKNFDNVPDVYNYYGEILLDQQKFQEAIE 494
                 89*****************************86 PP

  == domain 8  score: -0.7 bits;  conditional E-value: 3.4
      TPR_17   3 lkaleldPnn......adaynnLAelllknG 27 
                   a+e++++n      + ++ n+A +l + +
  KHJ32298.1 497 DTAIEIEKKNkscginVLPLINKALALFQWN 527
                 6788888877666666888888888876655 PP

  == domain 9  score: 1.8 bits;  conditional E-value: 0.55
      TPR_17  14 daynnLAelllknGdlmtArq 34 
                  a   +A+lll++G+  +A+q
  KHJ32298.1 549 IAIATMAQLLLQQGKVSEALQ 569
                 566678999999999999876 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0       1.5   1.1e+03       4      29 ..     142     167 ..     139     188 .. 0.77
   2 !   10.9   0.0   0.00056       0.4       5      54 ..     176     225 ..     172     246 .. 0.86
   3 ?    1.4   0.0      0.51   3.6e+02      35      61 ..     343     369 ..     341     374 .. 0.86
   4 !   23.5   0.0   6.4e-08   4.6e-05      14      72 ..     356     414 ..     350     415 .. 0.88
   5 !   10.2   0.1   0.00093      0.67      26      59 ..     402     435 ..     401     438 .. 0.92
   6 ?   -0.1   0.0       1.5   1.1e+03      36      57 ..     480     501 ..     442     507 .. 0.63
   7 !   16.0   1.7   1.4e-05      0.01       7      61 ..     526     580 ..     520     599 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 1.5
       TPR_9   4 iaireedweralavverllllaPddp 29 
                 +a  ++d+++a++ +   +l +Pd++
  KHJ32298.1 142 TAFGAKDFPKAIKLYGQAILCKPDPI 167
                 677899*********99999999874 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00056
       TPR_9   5 aireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLea 54 
                 +   ++we+  +     l l+++ +  +  R+++++ql+ +s+Al d+ a
  KHJ32298.1 176 YNALREWEKVVEDTTAALNLNSEYVKALNRRAIAYEQLNKFSEALLDFTA 225
                 556688999999999999***************************99976 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.51
       TPR_9  35 RGlllaqlGclsaAladLeaylalapd 61 
                 RG  ++ +G  s+A++dL   + l+p+
  KHJ32298.1 343 RGTFRYLSGESSEAIDDLTKSITLQPE 369
                 88899999**********998888886 PP

  == domain 4  score: 23.5 bits;  conditional E-value: 6.4e-08
       TPR_9  14 alavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapdaeairaqL 72 
                 a+  +   + l+P+  + +  R+ ++ +lG+  aA++d+e +++++ d+pd+   raqL
  KHJ32298.1 356 AIDDLTKSITLQPELTQSYVKRASMYLELGDKGAAVKDFENAIQQNNDDPDIFYHRAQL 414
                 666666678899***************************************98888887 PP

  == domain 5  score: 10.2 bits;  conditional E-value: 0.00093
       TPR_9  26 PddpeerrdRGlllaqlGclsaAladLeaylala 59 
                  ddp+  + R++l++ lG ++ A++d ++ ++l+
  KHJ32298.1 402 NDDPDIFYHRAQLHFILGEFADAAKDYQRSIDLD 435
                 589999**********************988875 PP

  == domain 6  score: -0.1 bits;  conditional E-value: 1.5
       TPR_9  36 GlllaqlGclsaAladLeayla 57 
                 G +l  +  +++A++ ++++++
  KHJ32298.1 480 GEILLDQQKFQEAIEKFDTAIE 501
                 4455555566666666666665 PP

  == domain 7  score: 16.0 bits;  conditional E-value: 1.4e-05
       TPR_9   7 reedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapd 61 
                  ++d+++a + ++  l ++P     +   ++ll q+G +s+Al+ +e++++la  
  KHJ32298.1 526 WNQDFSEAEKLCQQALSIDPMCDIAIATMAQLLLQQGKVSEALQYFERAAELART 580
                 589***********************************************99883 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0         5   3.6e+03       8      28 ..     140     160 ..     135     167 .. 0.76
   2 ?    1.6   0.1      0.94   6.7e+02       2      21 ..     201     220 ..     200     223 .. 0.89
   3 ?    3.4   0.2      0.24   1.7e+02      17      31 ..     316     330 ..     314     343 .. 0.81
   4 ?   -0.9   0.0       5.8   4.2e+03       4      33 ..     340     369 ..     337     374 .. 0.83
   5 !   14.2   0.0   8.3e-05     0.059       4      44 .]     374     414 ..     368     414 .. 0.94
   6 !    9.4   0.1     0.003       2.1       2      30 ..     406     434 ..     405     439 .. 0.89
   7 ?    2.2   0.0      0.58   4.2e+02       7      43 ..     445     481 ..     441     482 .. 0.85
   8 ?    7.5   0.0     0.012       8.5       2      34 ..     474     506 ..     473     508 .. 0.87
   9 !    8.0   0.0    0.0082       5.9      11      32 ..     524     545 ..     517     554 .. 0.81
  10 !   14.1   1.0   8.8e-05     0.063       4      37 ..     551     584 ..     548     592 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 5
      TPR_14   8 aeallalGdpdeAiallrral 28 
                 +   + + d+ +Ai+l+ +a+
  KHJ32298.1 140 GNTAFGAKDFPKAIKLYGQAI 160
                 566677889999****99987 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.94
      TPR_14   2 eallalaeallalGdpdeAi 21 
                 +al ++a a+++l ++ eA+
  KHJ32298.1 201 KALNRRAIAYEQLNKFSEAL 220
                 578899**********9996 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.24
      TPR_14  17 pdeAiallrralala 31 
                 ++eA++++rral+l+
  KHJ32298.1 316 YEEAATAFRRALELG 330
                 689*********985 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 5.8
      TPR_14   4 llalaeallalGdpdeAiallrralalaPd 33 
                 + +++ + + +G+  eAi+ l + + l+P+
  KHJ32298.1 340 YNMRGTFRYLSGESSEAIDDLTKSITLQPE 369
                 66788888899*******999998888885 PP

  == domain 5  score: 14.2 bits;  conditional E-value: 8.3e-05
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaql 44 
                 + ++a+ +l+lGd  +A++ ++ a++++ dd+++ ++ aql
  KHJ32298.1 374 YVKRASMYLELGDKGAAVKDFENAIQQNNDDPDIFYHRAQL 414
                 6789*******************************999996 PP

  == domain 6  score: 9.4 bits;  conditional E-value: 0.003
      TPR_14   2 eallalaeallalGdpdeAiallrralal 30 
                 +  + +a++++ lG++++A++ ++r ++l
  KHJ32298.1 406 DIFYHRAQLHFILGEFADAAKDYQRSIDL 434
                 67899********************9986 PP

  == domain 7  score: 2.2 bits;  conditional E-value: 0.58
      TPR_14   7 laeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 l+   +  G  + ++a +rr+++ + + ++++ ++++
  KHJ32298.1 445 LGVTQYKMGSIASSMATFRRCIKNFDNVPDVYNYYGE 481
                 6666677899999************999999999887 PP

  == domain 8  score: 7.5 bits;  conditional E-value: 0.012
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPdd 34 
                 +++  ++e+ll +++++eAi+ ++ a++   ++
  KHJ32298.1 474 DVYNYYGEILLDQQKFQEAIEKFDTAIEIEKKN 506
                 567789********************9987765 PP

  == domain 9  score: 8.0 bits;  conditional E-value: 0.0082
      TPR_14  11 llalGdpdeAiallrralalaP 32 
                 +  ++d+ eA++l+++al+ +P
  KHJ32298.1 524 FQWNQDFSEAEKLCQQALSIDP 545
                 345899*************999 PP

  == domain 10  score: 14.1 bits;  conditional E-value: 8.8e-05
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaea 37 
                  + +a++ll++G+  eA+++++ra +la ++ e+
  KHJ32298.1 551 IATMAQLLLQQGKVSEALQYFERAAELARTENEI 584
                 5789********************9988666555 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.88   6.3e+02       2      20 ..     144     162 ..     143     184 .. 0.72
   2 ?    5.7   0.3      0.03        22      16      44 ..     191     219 ..     183     221 .. 0.91
   3 ?   -0.2   0.0       2.1   1.5e+03       7      31 ..     316     342 ..     315     369 .. 0.78
   4 !   19.6   0.3   1.3e-06   0.00096       2      45 ..     382     425 ..     381     434 .. 0.93
   5 !    7.8   0.0    0.0064       4.6      23      56 ..     471     504 ..     449     509 .. 0.53
   6 !   24.5   2.0   4.1e-08   2.9e-05       4      57 ..     527     580 ..     527     589 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.88
      TPR_19   2 laegdyaeAlalleqalqe 20 
                 + ++d+  A++l+ qa+  
  KHJ32298.1 144 FGAKDFPKAIKLYGQAILC 162
                 6789999******999644 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.03
      TPR_19  16 qalqedpknaearllLAeallalgqldeA 44 
                 +al  + ++  a+ + A+a+ +l+ + eA
  KHJ32298.1 191 AALNLNSEYVKALNRRAIAYEQLNKFSEA 219
                 57888999********************9 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 2.1
      TPR_19   7 yaeAlalleqalqe..dpknaearllL 31 
                 y+eA+ ++++al+     ++++ ++++
  KHJ32298.1 316 YEEAATAFRRALELgdLGDYEAFAYNM 342
                 899999999999765466666666655 PP

  == domain 4  score: 19.6 bits;  conditional E-value: 1.3e-06
      TPR_19   2 laegdyaeAlalleqalqedpknaearllLAeallalgqldeAe 45 
                 l+ gd  +A++ +e+a+q++++++++ +  A++++ lg++++A 
  KHJ32298.1 382 LELGDKGAAVKDFENAIQQNNDDPDIFYHRAQLHFILGEFADAA 425
                 6678889***********************************96 PP

  == domain 5  score: 7.8 bits;  conditional E-value: 0.0064
      TPR_19  23 knaearllLAeallalgqldeAealLdalpeedp 56 
                 + +++  ++ e+ll +  ++eA++  d++ e ++
  KHJ32298.1 471 NVPDVYNYYGEILLDQQKFQEAIEKFDTAIEIEK 504
                 5555555555555555555555555554444333 PP

  == domain 6  score: 24.5 bits;  conditional E-value: 4.1e-08
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpd 57 
                 ++d+ eA +l +qal+ dp  + a + +A++ll++g + eA +  +++ e ++ 
  KHJ32298.1 527 NQDFSEAEKLCQQALSIDPMCDIAIATMAQLLLQQGKVSEALQYFERAAELART 580
                 589*****************9999999*******************99998776 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.22   1.6e+02      14      28 ..     148     160 ..     137     165 .. 0.85
   2 ?    1.4   0.1      0.58   4.2e+02       2      20 ..     169     187 ..     169     198 .. 0.82
   3 ?    5.4   0.1     0.031        22       1      19 [.     202     220 ..     202     226 .. 0.87
   4 ?    3.3   0.2      0.14     1e+02      15      28 ..     316     329 ..     316     337 .. 0.81
   5 ?   -0.7   0.0       2.6   1.9e+03      11      30 ..     348     366 ..     339     370 .. 0.70
   6 ?    3.0   0.0      0.18   1.3e+02       4      29 ..     376     401 ..     373     407 .. 0.75
   7 ?    5.9   0.0     0.021        15       6      29 ..     412     435 ..     408     450 .. 0.87
   8 !    8.4   0.0    0.0034       2.4       2      30 ..     476     504 ..     475     508 .. 0.83
   9 ?    6.1   0.0     0.018        13       7      28 ..     521     543 ..     516     545 .. 0.72
  10 !   15.9   0.4   1.3e-05    0.0095       3      34 ..     552     583 ..     550     585 .. 0.90

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.22
       TPR_7  14 dyeeAielyeqsLal 28 
                 d+ +Ai+ly q  a+
  KHJ32298.1 148 DFPKAIKLYGQ--AI 160
                 899********..54 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.58
       TPR_7   2 LlnLarlysrlGdyeeAie 20 
                 ++n a +y +l+++e+ +e
  KHJ32298.1 169 YSNRAACYNALREWEKVVE 187
                 6789999*********998 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.031
       TPR_7   1 aLlnLarlysrlGdyeeAi 19 
                 aL++ a +y++l++++eA+
  KHJ32298.1 202 ALNRRAIAYEQLNKFSEAL 220
                 79999*************8 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.14
       TPR_7  15 yeeAielyeqsLal 28 
                 yeeA++ ++++L+l
  KHJ32298.1 316 YEEAATAFRRALEL 329
                 9*********7755 PP

  == domain 5  score: -0.7 bits;  conditional E-value: 2.6
       TPR_7  11 r.lGdyeeAielyeqsLaltk 30 
                    G+ +eAi+ +++   +t 
  KHJ32298.1 348 YlSGESSEAIDDLTK--SITL 366
                 448999*****9999..5555 PP

  == domain 6  score: 3.0 bits;  conditional E-value: 0.18
       TPR_7   4 nLarlysrlGdyeeAielyeqsLalt 29 
                   a++y +lGd   A++ +e +++  
  KHJ32298.1 376 KRASMYLELGDKGAAVKDFENAIQQN 401
                 5699***************9966333 PP

  == domain 7  score: 5.9 bits;  conditional E-value: 0.021
       TPR_7   6 arlysrlGdyeeAielyeqsLalt 29 
                 a+l++ lG++++A++ y++s+ l+
  KHJ32298.1 412 AQLHFILGEFADAAKDYQRSIDLD 435
                 788888*************77665 PP

  == domain 8  score: 8.4 bits;  conditional E-value: 0.0034
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltk 30 
                 +++ +++  ++++++eAie +  +++++k
  KHJ32298.1 476 YNYYGEILLDQQKFQEAIEKFDTAIEIEK 504
                 5666999**************99777765 PP

  == domain 9  score: 6.1 bits;  conditional E-value: 0.018
       TPR_7   7 rlysr.lGdyeeAielyeqsLal 28 
                  + ++  +d++eA++l++q+L +
  KHJ32298.1 521 LALFQwNQDFSEAEKLCQQALSI 543
                 44455569***********6654 PP

  == domain 10  score: 15.9 bits;  conditional E-value: 1.3e-05
       TPR_7   3 lnLarlysrlGdyeeAielyeqsLaltkdped 34 
                   +a+l  ++G+ +eA++++e++ +l++ +++
  KHJ32298.1 552 ATMAQLLLQQGKVSEALQYFERAAELARTENE 583
                 569********************9*9999886 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       4.4   3.2e+03      10      29 ..     141     160 ..     140     162 .. 0.79
   2 ?   -2.6   0.0       8.2   5.9e+03      21      29 ..     178     186 ..     169     196 .. 0.54
   3 ?    4.3   0.0     0.056        40       4      24 ..     202     222 ..     201     228 .. 0.89
   4 ?   -0.5   0.1       1.7   1.2e+03      18      30 ..     316     328 ..     313     330 .. 0.82
   5 ?    4.9   0.0     0.034        25       9      30 ..     378     399 ..     372     399 .. 0.90
   6 ?    3.6   0.1     0.092        66       9      30 ..     412     433 ..     410     435 .. 0.88
   7 ?    5.5   0.0     0.024        17       5      32 ..     476     503 ..     474     505 .. 0.87
   8 !    6.9   0.0    0.0083         6       8      31 ..     519     543 ..     516     543 .. 0.83
   9 !   13.7   1.0   6.1e-05     0.044       7      33 ..     553     579 ..     550     583 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 4.4
      TPR_10  10 nalrqrgrydeAealleeal 29 
                 n+ +  +++ +A +l+ +a+
  KHJ32298.1 141 NTAFGAKDFPKAIKLYGQAI 160
                 66667789999999999998 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 8.2
      TPR_10  21 Aealleeal 29 
                 A++  e+++
  KHJ32298.1 178 ALREWEKVV 186
                 333334444 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.056
      TPR_10   4 slnNLanalrqrgrydeAeal 24 
                 +ln  a+a+ q++++ eA+ +
  KHJ32298.1 202 ALNRRAIAYEQLNKFSEALLD 222
                 79999*************865 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 1.7
      TPR_10  18 ydeAealleeala 30 
                 y+eA   +++al+
  KHJ32298.1 316 YEEAATAFRRALE 328
                 7888899999987 PP

  == domain 5  score: 4.9 bits;  conditional E-value: 0.034
      TPR_10   9 analrqrgrydeAealleeala 30 
                 a ++ ++g+  +A++++e a++
  KHJ32298.1 378 ASMYLELGDKGAAVKDFENAIQ 399
                 889***************9996 PP

  == domain 6  score: 3.6 bits;  conditional E-value: 0.092
      TPR_10   9 analrqrgrydeAealleeala 30 
                 a +++ +g++++A ++++++++
  KHJ32298.1 412 AQLHFILGEFADAAKDYQRSID 433
                 6678889************996 PP

  == domain 7  score: 5.5 bits;  conditional E-value: 0.024
      TPR_10   5 lnNLanalrqrgrydeAealleealair 32 
                 +n  + +l ++++++eA + ++ a++i 
  KHJ32298.1 476 YNYYGEILLDQQKFQEAIEKFDTAIEIE 503
                 8999*************99999998885 PP

  == domain 8  score: 6.9 bits;  conditional E-value: 0.0083
      TPR_10   8 Lanal.rqrgrydeAealleealai 31 
                  a al +  +++ eAe+l+++al+i
  KHJ32298.1 519 KALALfQWNQDFSEAEKLCQQALSI 543
                 56677788899************86 PP

  == domain 9  score: 13.7 bits;  conditional E-value: 6.1e-05
      TPR_10   7 NLanalrqrgrydeAealleealairr 33 
                  +a +l q+g+  eA++++e+a ++ r
  KHJ32298.1 553 TMAQLLLQQGKVSEALQYFERAAELAR 579
                 57999******************9987 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.4      0.12        85      30      76 ..     173     220 ..     138     221 .. 0.88
   2 ?    1.7   0.1      0.43   3.1e+02       5      73 ..     316     388 ..     314     397 .. 0.73
   3 !   11.3   0.0   0.00042       0.3      13      72 ..     395     455 ..     371     465 .. 0.79
   4 ?    6.6   0.0     0.013       9.2      27      58 ..     477     509 ..     462     511 .. 0.85
   5 !   13.4   0.6   9.8e-05      0.07      30      81 ..     520     573 ..     516     580 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.12
                 HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHH CS
      ANAPC3  30 AlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAi 76 
                 A c+  + ++++  e +  a +lns+  +++   A ++ +L+k+ eA+
  KHJ32298.1 173 AACYNALREWEKVVEDTTAAlNLNSEYVKALNRRAIAYEQLNKFSEAL 220
                 899999**************9999999999999999999******997 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.43
                 HHHHHHHHHHHH.HHH--HHHHHHH...HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HH CS
      ANAPC3   5 yknAiflaerllaaetespedayll...AlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkye 73 
                 y++A   + r+l+     ++ a+++   +   yl+g+  +A++ l k+  l+++  ++ +  A  +l+L+   
  KHJ32298.1 316 YEEAATAFRRALELGDLGDYEAFAYnmrGTFRYLSGESSEAIDDLTKSiTLQPELTQSYVKRASMYLELGDKG 388
                 6778888888887666677777777778999999999999999999997776666666665666667777655 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 0.00042
                 HHHH.HHH--HHHHHHH.HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-H CS
      ANAPC3  13 erllaaetespedayll.AlclylngqykrAyellrka.klnskslgcrylfAqcllkLkky 72 
                 e +  ++++++ d++++ A+ ++ +g++  A + ++++ +l+++ + +++ ++ +++k++++
  KHJ32298.1 395 ENAI-QQNNDDPDIFYHrAQLHFILGEFADAAKDYQRSiDLDHTFIFSHIQLGVTQYKMGSI 455
                 4455.566666678888899999999999999999999999999999999999999998876 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.013
                 HHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHH CS
      ANAPC3  27 yllAlclylngqykrAyellrka.klnskslgc 58 
                  ++++ l+ ++++++A+e +++a ++++k++ c
  KHJ32298.1 477 NYYGEILLDQQKFQEAIEKFDTAiEIEKKNKSC 509
                 467999************999999999999888 PP

  == domain 5  score: 13.4 bits;  conditional E-value: 9.8e-05
                 HHHHHHTT-.HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  30 Alclylngq.ykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 Al+l++ +q + +A +l+++a  +++    +  ++Aq ll+++k+ eA++ +e+
  KHJ32298.1 520 ALALFQWNQdFSEAEKLCQQAlSIDPMCDIAIATMAQLLLQQGKVSEALQYFER 573
                 788888555599999999999999999999999999************999986 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   2.6   3.2e-10   2.3e-07      59     214 ..     458     601 ..     371     614 .. 0.79

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 3.2e-10
    TPR_MalT  59 AlqalqeaeklarqadslhvallallqqaeilvaqGrLheAletyeqalqlateqglqqlplvgfllvlladllyEwn.dLeeAeqhlqeGielleqle 156
                 + ++++  +k   + d+++  ++   + +eil  q +++eA+e +  a++   e++ +   +  ++l+  a  l+ wn d+ eAe+ +q+++ +  + +
  KHJ32298.1 458 SMATFRRCIK---NFDNVPD-VYN--YYGEILLDQQKFQEAIEKFDTAIE--IEKKNKSCGINVLPLINKALALFQWNqDFSEAEKLCQQALSIDPMCD 548
                 4444433333...3333332.333..448*********************..5555566678888899999999999967***********88877773 PP

    TPR_MalT 157 peaaldayvllarialaqGdleeAetllekaeelaresnfhvdwlanaeevrvrlwla 214
                       a +++a++ l+qG+++eA++++e+a elar++n  + +l+ ae++r +l ++
  KHJ32298.1 549 I-----AIATMAQLLLQQGKVSEALQYFERAAELARTENEILNALSYAEATRTQLAVQ 601
                 3.....4578999999***********************8889998888888776554 PP

>> SHNi-TPR  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       4.3   3.1e+03      21      31 ..     146     156 ..     146     158 .. 0.84
   2 ?   -1.9   0.0       3.2   2.3e+03      21      32 ..     186     197 ..     186     202 .. 0.81
   3 ?    1.5   0.0      0.29   2.1e+02      15      27 ..     214     226 ..     213     227 .. 0.92
   4 ?    3.9   0.0     0.052        37      17      30 ..     316     329 ..     314     329 .. 0.95
   5 ?    5.7   0.0     0.014        10      18      34 ..     354     370 ..     354     373 .. 0.87
   6 ?   -1.2   0.0         2   1.5e+03      19      28 ..     389     398 ..     388     399 .. 0.84
   7 !    7.8   0.1     0.003       2.1      17      30 ..     421     434 ..     419     434 .. 0.92
   8 !   10.7   0.1    0.0004      0.28       2      33 ..     474     505 ..     473     508 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 4.3
    SHNi-TPR  21 veDlrkaLeLr 31 
                 ++D+ ka++L+
  KHJ32298.1 146 AKDFPKAIKLY 156
                 689*****997 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 3.2
    SHNi-TPR  21 veDlrkaLeLre 32 
                 veD ++aL+L  
  KHJ32298.1 186 VEDTTAALNLNS 197
                 6899*****965 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.29
    SHNi-TPR  15 enFpqAveDlrka 27 
                 ++F++A+ D++++
  KHJ32298.1 214 NKFSEALLDFTAS 226
                 69********997 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.052
    SHNi-TPR  17 FpqAveDlrkaLeL 30 
                 +++A++ +r+aLeL
  KHJ32298.1 316 YEEAATAFRRALEL 329
                 89***********8 PP

  == domain 5  score: 5.7 bits;  conditional E-value: 0.014
    SHNi-TPR  18 pqAveDlrkaLeLreql 34 
                 ++A+ Dl+k++ L+ +l
  KHJ32298.1 354 SEAIDDLTKSITLQPEL 370
                 58************887 PP

  == domain 6  score: -1.2 bits;  conditional E-value: 2
    SHNi-TPR  19 qAveDlrkaL 28 
                  Av+D++ a+
  KHJ32298.1 389 AAVKDFENAI 398
                 69****9997 PP

  == domain 7  score: 7.8 bits;  conditional E-value: 0.003
    SHNi-TPR  17 FpqAveDlrkaLeL 30 
                 F +A++D++++++L
  KHJ32298.1 421 FADAAKDYQRSIDL 434
                 99*********987 PP

  == domain 8  score: 10.7 bits;  conditional E-value: 0.0004
    SHNi-TPR   2 dvydlLGEislEnenFpqAveDlrkaLeLreq 33 
                 dvy+  GEi l + +F +A+e +++a+e+  +
  KHJ32298.1 474 DVYNYYGEILLDQQKFQEAIEKFDTAIEIEKK 505
                 999999**********************9655 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.16   1.1e+02     142     177 ..     162     197 ..     146     214 .. 0.87
   2 !    9.5   0.0   0.00073      0.52     127     182 ..     355     407 ..     345     420 .. 0.84
   3 ?    2.7   0.0     0.086        62     142     176 ..     401     435 ..     399     438 .. 0.90
   4 !    9.5   1.8   0.00071      0.51     115     259 ..     441     595 ..     423     604 .. 0.61

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.16
      TPR_15 142 aeqsaafllaraelyrqegqtdaAlrdyreAlalap 177
                  + ++ f++ ra+ y +  ++++ ++d   Al+l+ 
  KHJ32298.1 162 CKPDPIFYSNRAACYNALREWEKVVEDTTAALNLNS 197
                 567999*************************99876 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00073
      TPR_15 127 driaellksleeeeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdssel 182
                 ++i++l ks++ ++++ qs   ++ ra++y++ g++ aA++d+++A++ + d+ ++
  KHJ32298.1 355 EAIDDLTKSITLQPELTQS---YVKRASMYLELGDKGAAVKDFENAIQQNNDDPDI 407
                 5677777777777777665...789************************9999876 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.086
      TPR_15 142 aeqsaafllaraelyrqegqtdaAlrdyreAlala 176
                  ++++ +++ ra+l+   g+ ++A +dy++ ++l+
  KHJ32298.1 401 NNDDPDIFYHRAQLHFILGEFADAAKDYQRSIDLD 435
                 579999************************99987 PP

  == domain 4  score: 9.5 bits;  conditional E-value: 0.00071
      TPR_15 115 salellerakdydriaellkslee.eeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgrraeLrellkawkara.. 210
                 s ++l+  + ++  ia+ +++  +  +++ + + ++ +++e+ +++ + ++A++ +  A++ + ++++   + l l +    +a    +l +w+++   
  KHJ32298.1 441 SHIQLGVTQYKMGSIASSMATFRRcIKNFDNVPDVYNYYGEILLDQQKFQEAIEKFDTAIEIEKKNKSCGINVLPLIN----KAL---ALFQWNQDFse 532
                 556666666666666666666654344566666666667777777777777777777777766666666655554333....332...45555555555 PP

      TPR_15 211 .........esdasLwgplaa.AlllLgrp..kkALeylrk..qakenrkdplwllaYADale 259
                          + d+  + + a+ A+llL++   ++AL+y+++   ++  ++++l  l+YA+a  
  KHJ32298.1 533 aeklcqqalSIDPMCDIAIATmAQLLLQQGkvSEALQYFERaaELARTENEILNALSYAEATR 595
                 555554444445555555554256666655225899999986667788899999999999875 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       3.1   2.2e+03      10      27 ..     143     160 ..     136     160 .. 0.76
   2 ?   -0.8   0.0       4.5   3.2e+03       5      20 ..     205     220 ..     202     224 .. 0.85
   3 ?    1.2   0.1         1   7.2e+02      14      28 ..     314     328 ..     299     329 .. 0.78
   4 ?    6.5   0.1     0.021        15       2      29 ..     373     400 ..     372     401 .. 0.91
   5 ?    0.7   0.0       1.4     1e+03       3      26 ..     408     431 ..     406     434 .. 0.79
   6 !    8.4   0.0    0.0051       3.6       5      31 ..     444     470 ..     441     471 .. 0.93
   7 ?    1.4   0.1      0.88   6.3e+02       6      28 ..     479     501 ..     478     503 .. 0.82
   8 ?    0.6   0.0       1.5   1.1e+03       7      30 ..     520     544 ..     516     545 .. 0.77
   9 ?    6.9   0.8     0.016        11       6      27 ..     554     575 ..     550     578 .. 0.90
  10 ?   -0.8   0.1       4.5   3.2e+03       7      21 ..     587     601 ..     587     604 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 3.1
                 HHHHHHHHHHHHHHHHHH CS
       TPR_6  10 yrklgdtdkAlealerli 27 
                  + ++d  kA++++ + i
  KHJ32298.1 143 AFGAKDFPKAIKLYGQAI 160
                 45567999******9876 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 4.5
                 HHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrklgdtdkAl 20 
                 ++a +y++l++ ++Al
  KHJ32298.1 205 RRAIAYEQLNKFSEAL 220
                 6899999999999996 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 1
                 HHHHHHHHHHHHHHH CS
       TPR_6  14 gdtdkAlealerlik 28 
                 + +++A +a++r ++
  KHJ32298.1 314 DGYEEAATAFRRALE 328
                 5699*******9886 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.021
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAlealerlike 29 
                 ++ k+a  y++lgd+ +A++ +e+ i++
  KHJ32298.1 373 SYVKRASMYLELGDKGAAVKDFENAIQQ 400
                 68899******99***********9986 PP

  == domain 5  score: 0.7 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAlealerl 26 
                 +y++a++++ lg+ ++A + ++r 
  KHJ32298.1 408 FYHRAQLHFILGEFADAAKDYQRS 431
                 688888888667999999999985 PP

  == domain 6  score: 8.4 bits;  conditional E-value: 0.0051
                 HHHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   5 klalsyrklgdtdkAlealerlikeYP 31 
                 +l+  ++k+g  + ++++++r+ik++ 
  KHJ32298.1 444 QLGVTQYKMGSIASSMATFRRCIKNFD 470
                 799**********************96 PP

  == domain 7  score: 1.4 bits;  conditional E-value: 0.88
                 HHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealerlik 28 
                  ++ ++ +++ ++A+e ++  i+
  KHJ32298.1 479 YGEILLDQQKFQEAIEKFDTAIE 501
                 57788887799*****9998886 PP

  == domain 8  score: 0.6 bits;  conditional E-value: 1.5
                 HHHHHH.HHHHHHHHHHHHHHHHH- CS
       TPR_6   7 alsyrk.lgdtdkAlealerlikeY 30 
                 al++++  +d ++A ++ ++ ++  
  KHJ32298.1 520 ALALFQwNQDFSEAEKLCQQALSID 544
                 666666666*******999998765 PP

  == domain 9  score: 6.9 bits;  conditional E-value: 0.016
                 HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealerli 27 
                 +a++++++g+ ++Al+++er  
  KHJ32298.1 554 MAQLLLQQGKVSEALQYFERAA 575
                 79999999***********986 PP

  == domain 10  score: -0.8 bits;  conditional E-value: 4.5
                 HHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAle 21 
                 alsy ++++t+ A++
  KHJ32298.1 587 ALSYAEATRTQLAVQ 601
                 89****99**99986 PP

>> BTAD  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       2.2   1.6e+03      33      66 ..     179     211 ..     133     250 .. 0.60
   2 ?    6.3   0.0     0.017        12      61     124 ..     336     399 ..     317     407 .. 0.85
   3 ?    1.4   0.0      0.55   3.9e+02      67     124 ..     410     467 ..     406     471 .. 0.90
   4 ?    6.7   0.3     0.012       8.9      80     129 ..     532     581 ..     516     588 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 2.2
                 HTT--SSTTGGGTTSTTHHHHHHHHHHHHHHHHH CS
        BTAD  33 lalwrGpaladleagewleaererleelrleale 66 
                 l++w+ ++++d +a   l++e ++  ++r  a+e
  KHJ32298.1 179 LREWE-KVVEDTTAALNLNSEYVKALNRRAIAYE 211
                 33332.2222222222222222222222222222 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.017
                 HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
        BTAD  61 rlealealaeaelrlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYerlrr 124
                    a+  +   +   G+ +ea+++l++ ++++P   +++ +    +  +G++++A + +e++ +
  KHJ32298.1 336 EAFAYNMRGTFRYLSGESSEAIDDLTKSITLQPELTQSYVKRASMYLELGDKGAAVKDFENAIQ 399
                 4556677777888899*****************************************9999866 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.55
                 HHHHHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
        BTAD  67 alaeaelrlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYerlrr 124
                  +a++++ lG+ ++a++++++ ++++ +   +h ql    +++G  a  +++++r+ +
  KHJ32298.1 410 HRAQLHFILGEFADAAKDYQRSIDLDHTFIFSHIQLGVTQYKMGSIASSMATFRRCIK 467
                 5788899999*************999999999999999***************99865 PP

  == domain 4  score: 6.7 bits;  conditional E-value: 0.012
                 HHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHH CS
        BTAD  80 ealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYerlrrlLaee 129
                 ea +  +++++ +P+ + + + + + l ++G+ +eAL+++er+ +l ++e
  KHJ32298.1 532 EAEKLCQQALSIDPMCDIAIATMAQLLLQQGKVSEALQYFERAAELARTE 581
                 455556788889999999999999******************99887766 PP

>> MAS20  MAS20 protein import receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.3    0.0031       2.3      25     107 ..      72     158 ..      61     160 .. 0.73
   2 ?   -2.5   0.0       7.1   5.1e+03      89     103 ..     314     328 ..     299     330 .. 0.74
   3 ?    2.1   0.0      0.27     2e+02      82     107 ..     480     505 ..     477     514 .. 0.89
   4 ?    4.7   0.1     0.041        30      81     116 ..     554     589 ..     550     595 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0031
       MAS20  25 fkkklrerrkkqakaakeeeeaekaekkk..kealeeakeelptdaeevekfFle..evqlGEellaqgeeeeaaehlynAlkvcpq 107
                  kk+ +++r++++ + k+ +e+e+++ +   k++l e   el + +eev + + e  ++ l+ +l   g+   +a+ + +A+k+++q
  KHJ32298.1  72 QKKSTKKDRRRKKDELKKGSESERSAPELkpKTVLVEPVPELLDVNEEVVAKLSEqdKIDLASKLKLAGNTAFGAKDFPKAIKLYGQ 158
                 577788888888877777776666666556766666666664455555555554412699*************************98 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 7.1
       MAS20  89 geeeeaaehlynAlk 103
                 + +eeaa+++ +Al 
  KHJ32298.1 314 DGYEEAATAFRRALE 328
                 568999999999986 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.27
       MAS20  82 GEellaqgeeeeaaehlynAlkvcpq 107
                 GE ll q++ +ea+e++  A+ + ++
  KHJ32298.1 480 GEILLDQQKFQEAIEKFDTAIEIEKK 505
                 9*******************998766 PP

  == domain 4  score: 4.7 bits;  conditional E-value: 0.041
       MAS20  81 lGEellaqgeeeeaaehlynAlkvcpqPqeLlqilq 116
                 +++ ll+qg++ ea++ + +A  +  + +e+l+ l 
  KHJ32298.1 554 MAQLLLQQGKVSEALQYFERAAELARTENEILNALS 589
                 67789999***********************99875 PP

>> TAF1_subA  TAF RNA Polymerase I subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       4.1   2.9e+03     190     259 ..     187     250 ..     173     264 .. 0.61
   2 ?   -2.8   0.0       4.5   3.3e+03      16      45 ..     477     505 ..     467     520 .. 0.79
   3 ?   13.7   0.5   4.3e-05     0.031     152     222 ..     528     597 ..     519     615 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 4.1
   TAF1_subA 190 deAlevlkecaydkklPsrlnahllleqflkrnkaskkklisc...vLkLhelvPsdPtlmlelekLlkkskk 259
                 +++ ++l + +++  +  + +a  + eq++k ++a  +  +sc    ++       +    +++e+Llkk  +
  KHJ32298.1 187 EDTTAAL-NLNSEYVKALNRRAIAY-EQLNKFSEALLDFTASCiidGFR------NE-LSAQSVERLLKKVAE 250
                 4555555.33444445556666667.78888777777777777333333......44.455677777777666 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 4.5
   TAF1_subA  16 svllqgledekspkeareiiwkvgleilkh 45 
                 +++ + l d+++++ea e+ + +++ei k+
  KHJ32298.1 477 NYYGEILLDQQKFQEAIEK-FDTAIEIEKK 505
                 6677888888888889999.9999999877 PP

  == domain 3  score: 13.7 bits;  conditional E-value: 4.3e-05
   TAF1_subA 152 dfykaavkllrlalistPgvwdafllpyvqlLelggkedeAlevlkec.aydkklPsrlnahllleqflkrn 222
                 +  ++a+kl+++al   P   d+++    qlL+  gk+ eAl+  +   ++ ++  + lna  + e  ++ +
  KHJ32298.1 528 QDFSEAEKLCQQALSIDPMC-DIAIATMAQLLLQQGKVSEALQYFERAaELARTENEILNALSYAE-ATRTQ 597
                 45567888998888888888.************************555599999999999999944.44444 PP

>> ANAPC5  Anaphase-promoting complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.1     0.003       2.2      13      77 ..     334     405 ..     325     421 .. 0.75
   2 ?    2.0   0.0       0.3   2.2e+02      37      69 ..     435     467 ..     415     469 .. 0.82
   3 ?    3.2   3.1      0.13        90      25      85 ..     496     593 ..     484     602 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.003
      ANAPC5  13 dYqqaldsLhryFDyvlsqnessq.........kksyqyalLnlaslhadfghneeAvkaleeairlArenkDk 77 
                 dY++   ++   F y ++++++           + ++  + ++ as+  ++g++ +Avk +e+ai+  ++n D 
  KHJ32298.1 334 DYEAFAYNMRGTFRYLSGESSEAIddltksitlQPELTQSYVKRASMYLELGDKGAAVKDFENAIQ--QNNDDP 405
                 66666666666777766666666567777777778899999***********************96..555554 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.3
      ANAPC5  37 kksyqyalLnlaslhadfghneeAvkaleeair 69 
                  +++ ++ ++l ++++++g  + ++++++ +i+
  KHJ32298.1 435 DHTFIFSHIQLGVTQYKMGSIASSMATFRRCIK 467
                 34788899999999********99999999986 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.13
      ANAPC5  25 FDyvlsqnessq....................................kksyqyalLnlaslhadfghneeAvkaleeairlArenkD.kscLalala 85 
                 FD +++ +++++                                      + ++a+  +a l  + g+  eA++ +e a +lAr +++  + L++a a
  KHJ32298.1 496 FDTAIEIEKKNKscginvlplinkalalfqwnqdfseaeklcqqalsiDPMCDIAIATMAQLLLQQGKVSEALQYFERAAELARTENEiLNALSYAEA 593
                 555555555555555555555555555555556666666666666666778889999999999999******************87662466666665 PP

>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0       1.5   1.1e+03      21      33 ..     147     159 ..     136     161 .. 0.84
   2 ?   -2.0   0.0       9.4   6.7e+03      21      34 ..     528     541 ..     527     542 .. 0.87
   3 ?    9.9   0.1    0.0017       1.3      23      36 ..     564     577 ..     557     578 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 1.5
        Sel1  21 kDpekAiewyekA 33 
                 kD  kAi++y +A
  KHJ32298.1 147 KDFPKAIKLYGQA 159
                 6999******998 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 9.4
        Sel1  21 kDpekAiewyekAA 34 
                 +D ++A+++ ++A 
  KHJ32298.1 528 QDFSEAEKLCQQAL 541
                 6999*****99995 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.0017
        Sel1  23 pekAiewyekAAeq 36 
                 +++A++++e+AAe+
  KHJ32298.1 564 VSEALQYFERAAEL 577
                 689*********97 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0      0.12        84      17      31 ..     146     160 ..     145     162 .. 0.92
   2 ?    1.6   0.0       0.4   2.9e+02       8      26 ..     204     222 ..     201     261 .. 0.83
   3 ?   -1.2   0.0       3.1   2.2e+03      20      32 ..     316     328 ..     310     335 .. 0.70
   4 ?   -1.5   0.1       3.9   2.8e+03       7      32 ..     374     399 ..     369     400 .. 0.76
   5 ?   -1.6   0.0         4   2.8e+03      18      33 ..     419     434 ..     418     434 .. 0.69
   6 ?    4.1   0.0     0.066        48      17      32 ..     486     501 ..     483     508 .. 0.75
   7 ?    7.1   0.6     0.008       5.7       5      33 ..     549     577 ..     549     610 .. 0.91

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.12
         MIT  17 agnyeeAlelYkeal 31 
                 a+++++A++lY +a+
  KHJ32298.1 146 AKDFPKAIKLYGQAI 160
                 789**********98 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.4
         MIT   8 vkkAveeDnagnyeeAlel 26 
                  ++A+ +++ ++++eAl  
  KHJ32298.1 204 NRRAIAYEQLNKFSEALLD 222
                 579*************965 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 3.1
         MIT  20 yeeAlelYkeale 32 
                 yeeA  +++ ale
  KHJ32298.1 316 YEEAATAFRRALE 328
                 6666666666665 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 3.9
         MIT   7 lvkkAveeDnagnyeeAlelYkeale 32 
                 +vk+A  + + g+  +A++ +++a++
  KHJ32298.1 374 YVKRASMYLELGDKGAAVKDFENAIQ 399
                 67888888888888888888888876 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 4
         MIT  18 gnyeeAlelYkealel 33 
                 g++++A + Y+ +++l
  KHJ32298.1 419 GEFADAAKDYQRSIDL 434
                 5677777777777775 PP

  == domain 6  score: 4.1 bits;  conditional E-value: 0.066
         MIT  17 agnyeeAlelYkeale 32 
                 +++++eA+e++ +a+e
  KHJ32298.1 486 QQKFQEAIEKFDTAIE 501
                 4778888888888876 PP

  == domain 7  score: 7.1 bits;  conditional E-value: 0.008
         MIT   5 lelvkkAveeDnagnyeeAlelYkealel 33 
                 ++++++A  + ++g+ +eAl++++ a el
  KHJ32298.1 549 IAIATMAQLLLQQGKVSEALQYFERAAEL 577
                 6799**********************986 PP

>> TPR_20  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.1    0.0049       3.5       5      43 ..     388     426 ..     384     438 .. 0.89
   2 ?    2.0   0.2      0.36   2.6e+02      22      44 ..     548     570 ..     531     584 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0049
      TPR_20   5 apelaeleaalaanpddldarldlAlallaagryeeAle 43 
                  + ++++e+a+++n dd d+ +  A++ +  g+ ++A++
  KHJ32298.1 388 GAAVKDFENAIQQNNDDPDIFYHRAQLHFILGEFADAAK 426
                 567899*****************************9986 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.36
      TPR_20  22 ldarldlAlallaagryeeAleq 44 
                   a   +A++ll++g++ eAl+ 
  KHJ32298.1 548 DIAIATMAQLLLQQGKVSEALQY 570
                 5566679*************975 PP

>> NARP1  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   1.5      0.72   5.2e+02     410     449 ..      72      99 ..      59     134 .. 0.48
   2 ?    0.6   0.1      0.28     2e+02      23      67 ..     175     219 ..     157     266 .. 0.77
   3 ?    6.7   0.0    0.0041       2.9     206     254 ..     351     399 ..     338     409 .. 0.81
   4 ?    1.8   0.1      0.12        90     184     258 ..     431     505 ..     419     514 .. 0.83
   5 ?    0.6   0.2      0.28     2e+02     206     255 ..     528     577 ..     481     602 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.72
                 HHHHHHHHHHHHHHHHHHHHHHHHHH--.......----- CS
       NARP1 410 rkklrkkakkaekkaekeeaekaekekekkaaekkakked 449
                 +kk  kk ++            ++k + kk +e+++++ +
  KHJ32298.1  72 QKKSTKKDRR------------RKKDELKKGSESERSAPE 99 
                 1111111111............111111222222222233 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.28
                 HHHHHHHHGGG---HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       NARP1  23 AlehLeekekqivDklavketkaelllkLgrkeeAeatyeaLler 67 
                  ++ L+e ek + D+ a ++ ++e++ +L+r++ A + +++  e 
  KHJ32298.1 175 CYNALREWEKVVEDTTAALNLNSEYVKALNRRAIAYEQLNKFSEA 219
                 5788999999999*****************999988777665554 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0041
                 T-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       NARP1 206 gsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaevmeeark 254
                 g+ ++A++ + k i  +p+l++ y+ +a ++   Gd  +A++  e+a +
  KHJ32298.1 351 GESSEAIDDLTKSITLQPELTQSYVKRASMYLELGDKGAAVKDFENAIQ 399
                 4566899999999999999999999999999999999999998888754 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.12
                 ----SSHHHHHHHHHHHHHHHHT-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHCTTT CS
       NARP1 184 ekepesallwvlyflAqhydklgsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaevmeearklDla 258
                 + +  +++++ +  l     k+gs   ++ +  ++i++ +++ ++y   ++il  +  +++A+e  ++a ++ ++
  KHJ32298.1 431 SIDLDHTFIFSHIQLGVTQYKMGSIASSMATFRRCIKNFDNVPDVYNYYGEILLDQQKFQEAIEKFDTAIEIEKK 505
                 5566667777777777777889999999************************************99999887766 PP

  == domain 5  score: 0.6 bits;  conditional E-value: 0.28
                 T-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHC CS
       NARP1 206 gsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaevmeearkl 255
                 ++ ++A ++ ++a++ +p +     t a++l ++G +++A +  e+a +l
  KHJ32298.1 528 QDFSEAEKLCQQALSIDPMCDIAIATMAQLLLQQGKVSEALQYFERAAEL 577
                 45557777788888888877777778888888888888888888877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (621 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1110  (0.0619109); expected 358.6 (0.02)
Passed bias filter:                      677  (0.0377601); expected 358.6 (0.02)
Passed Vit filter:                        83  (0.00462937); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.76u 0.30s 00:00:01.06 Elapsed: 00:00:00.50
# Mc/sec: 3732.69
//
Query:       KHJ32299.1  [L=211]
Description: hypothetical protein EV44_g4330 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       656  (0.0365888); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1579.67
//
Query:       KHJ32300.1  [L=692]
Description: putative sh3 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00011   21.8   0.0     0.0002   20.9   0.0    1.5  1  SH3_1     SH3 domain
  ------ inclusion threshold ------
      0.044   13.6   0.0      0.083   12.8   0.0    1.5  1  SH3_9     Variant SH3 domain


Domain annotation for each model (and alignments):
>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   2.2e-08    0.0002      15      48 .]     106     139 ..      92     139 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 2.2e-08
                 EBSTTEEEEEEEECSSSEEEEEETTSTEEEEEEG CS
       SH3_1  15 sfkkGDviivleksedgWwkgrlkgtgkeGliPs 48 
                 + +kGD++ +l++s++ Ww +r+  +   G+ P+
  KHJ32300.1 106 NATKGDTMVLLDDSNSYWWLVRVVKDSSIGYLPA 139
                 568********************99999999996 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   9.2e-06     0.083      17      46 ..     109     140 ..      93     143 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 9.2e-06
       SH3_9  17 rGDvitvieesedgWlegs..ltGrtGlvPan 46 
                 +GD+ +++++s+++W++++  ++++ G++Pa 
  KHJ32300.1 109 KGDTMVLLDDSNSYWWLVRvvKDSSIGYLPAE 140
                 79****************9766********95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (692 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       855  (0.0476881); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4791.95
//
Query:       KHJ32301.1  [L=150]
Description: hypothetical protein EV44_g3533 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.36   10.8   5.1       0.74    9.9   5.1    1.6  1  AT_hook   AT hook motif


Domain annotation for each model (and alignments):
>> AT_hook  AT hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   5.1   4.2e-05      0.74       1      12 [.      60      71 ..      60      72 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 4.2e-05
     AT_hook  1 kRkRGRPrKaat 12
                kR+RGRP+ +++
  KHJ32301.1 60 KRGRGRPKGTRN 71
                8*******9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.43
# Mc/sec: 1051.11
//
Query:       KHJ32302.1  [L=518]
Description: putative platelet-activating factor acetylhydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.6e-48  163.6   0.0    2.2e-47  161.4   0.0    1.9  1  PAF-AH_p_II      Platelet-activating factor acetylhydrolase, 
    3.1e-06   26.3   0.0    0.00021   20.3   0.0    2.2  2  Chlorophyllase2  Chlorophyllase enzyme
     0.0011   18.1   0.0     0.0021   17.1   0.0    1.5  1  Chlorophyllase   Chlorophyllase
  ------ inclusion threshold ------
       0.15   12.6   0.0       0.27   11.8   0.0    1.4  1  Abhydrolase_6    Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> PAF-AH_p_II  Platelet-activating factor acetylhydrolase, isoform II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.4   0.0     5e-51   2.2e-47      12     360 ..      21     453 ..      15     478 .. 0.81

  Alignments for each domain:
  == domain 1  score: 161.4 bits;  conditional E-value: 5e-51
                  -SSSSEEE...............EEEEEESSSTTSEEEEEEEEE.S.SSSS-EEESS-SHH..HHHHHHHHHTS-HHHHHHH...HHHHTT-EEEEEE CS
  PAF-AH_p_II  12 vsGpysvG...............CedlmieeklrgvflRlyypldkadedredelWlPkke..yaqGlsevlkasrlllnllf..kllvgslrlpvkk 90 
                   sGpy+vG                  l  ++k +++  R++yp+d  ++++e++ WlP+ +  y+ G   +l++++ +   l      ++ +++p+  
   KHJ32302.1  21 FSGPYKVGtidveipldelrspsPSPLDDDSKVKTILYRIFYPCDP-ETKNEYADWLPQPQraYLAGYCRLLNVKSNVASCLSyiPNPFSFIKIPARI 117
                  679999999999999999998876777788899***********75.88999999998765449**********999988883114468889****99 PP

                  T--B.--S...S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHH.T.......--EEEE-----GGGHHHHHHH CS
  PAF-AH_p_II  91 nell.ktk...ekyPlivFsHGLgafRtlYsalcielAskGfvvaavEHrDesAaatyvlkdklaaee.eeevvesrekewiklrkvkeeeevklrne 183
                  ++++ k++   +++P+++FsHGLg+ R+ Ys +++++ s+G++v++ EHrD sA ++++ +  ++a+  +++ ++ +   +i+l +v   + ++ rn 
   KHJ32302.1 118 DAPIlKANnlnNRWPVMIFSHGLGGTRNTYSFIAGSISSYGMIVITPEHRDGSAPISFIRNLSPEAKGlKQTLSDDQSVDYIQLPHVASSTVEEARNS 215
                  9986255577788********************************************9955444444313344455555689999999999999**** PP

                  HHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEE...EEEEEETHHHHHHH............................HHHHH-. CS
  PAF-AH_p_II 184 qvkqRaqEcskaLkllreinlGepvenvldsdfdlqqlKdnldtsk...vaviGHsFGgAtvi............................kslsed. 249
                  q+k R  E+  + + l++in G p +n+ +s+f l ++K+ +d +    ++ +GHsFG+At+                             ++++++ 
   KHJ32302.1 216 QLKIRLWELGLVHDSLLKINDGIPIKNLSPSSFILDSVKGMMDLETpgkISFAGHSFGAATITqfvkstfyassvyqapkdfeplfkpdstATITKQi 313
                  ******************************************9986667*************999******999999999999988887655555556 PP

                  TTS-EEEEES---TTS-GGG...........GGG--S-....EEEEEETTT--H.HHHHHHHT..................T--TTS-EEEEEETT-- CS
  PAF-AH_p_II 250 teFrcaialDaWmlPveeev...........yskvrqP....llfinsekfqta.edikkmkk..................vvslkkeskvitvkGsv 313
                  +e    i+lD W lP++ e+           y++ + P    +l i s++f    e ++   k                   +s+ ke      + s 
   KHJ32302.1 314 IESTPVILLDVWCLPLKAETtrwlwnrplpsYNNEKSPggkvILAIESASFYNWdEHLQTT-KkllspspsssinleavrnDISTWKEPYFYYAENSA 410
                  788889**********998722222222222334444444445667776664440444444.36*************998867778888999999*** PP

                  GGGGSGGGGSS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT CS
  PAF-AH_p_II 314 HqnfsDftfvlgkligkvlklkgeidpeealdiankaslaFLqkhld 360
                  H ++sDf ++ +++  k+l      +pe  + ++++a ++FL+++ d
   KHJ32302.1 411 HISQSDFGLLYPSITNKFLGC---EEPERLMMLQVRAIVQFLRNQ-D 453
                  ******************976...69*****************98.4 PP

>> Chlorophyllase2  Chlorophyllase enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   4.7e-08   0.00021      14      54 ..     128     168 ..     120     215 .. 0.83
   2 !    3.7   0.0    0.0055        24      91     147 ..     264     320 ..     255     327 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 4.7e-08
  Chlorophyllase2  14 ageYpvllflhGylllnslYsqlLkhiashgfivvapqlyk 54 
                      ++++pv++f hG+  + + Ys +  +i+s+g iv+ p+   
       KHJ32302.1 128 NNRWPVMIFSHGLGGTRNTYSFIAGSISSYGMIVITPEHRD 168
                      5789*********************************6544 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0055
  Chlorophyllase2  91 klalsgHSrGgktafalalgkaktslkfsaligvdPvagaskskqtepkiLtyepes 147
                      k++ +gHS G+ t+ + +  +  +s  ++a    +P+   +++  ++ +i++ +p+ 
       KHJ32302.1 264 KISFAGHSFGAATITQFVKSTFYASSVYQAPKDFEPLFKPDSTATITKQIIESTPVI 320
                      7899*****************999999999999999999888888888898888865 PP

>> Chlorophyllase  Chlorophyllase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   4.7e-07    0.0021      43      80 ..     128     165 ..     100     180 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 4.7e-07
  Chlorophyllase  43 aGtypvvlflhGtllsnkfyskllnhiashGfivvaPq 80 
                     +  +pv++f hG   + ++ys +   i+s+G iv++P+
      KHJ32302.1 128 NNRWPVMIFSHGLGGTRNTYSFIAGSISSYGMIVITPE 165
                     5689********************************97 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0     6e-05      0.27      63     115 ..     261     313 ..     235     421 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6e-05
                    .TTSEEEEEETCHHHHHHHHHHCC..EE.EEES-.....----TTT..S----TTHHHH CS
  Abhydrolase_6  63 gggpvvlvGHSlGGalalaaaplalvvg.vlldp...pptalpagl..laaalelllal 115
                     +g++   GHS+G+a  ++++++++ ++ v+ +p          +l  ++  +++ ++ 
     KHJ32302.1 261 TPGKISFAGHSFGAATITQFVKSTFYASsVYQAPkdfE------PLfkPDSTATITKQI 313
                    5889999********99999999977777*****4441......332322222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.31s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3445.63
//
Query:       KHJ32303.1  [L=551]
Description: hypothetical protein EV44_g4379 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-12   46.5   0.0    1.6e-06   27.7   0.0    2.7  2  Glyco_transf_21  Glycosyl transferase family 21
     0.0022   17.9   0.0      0.054   13.4   0.0    2.2  2  Glyco_tranf_2_3  Glycosyltransferase like family 2
  ------ inclusion threshold ------
       0.11   12.3   0.0       0.69    9.7   0.0    2.2  1  Glycos_transf_2  Glycosyl transferase family 2


Domain annotation for each model (and alignments):
>> Glyco_transf_21  Glycosyl transferase family 21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   2.8e-10   1.6e-06      11      56 ..     160     205 ..     153     254 .. 0.78
   2 !   16.0   0.0     1e-06    0.0062      73     141 ..     270     349 ..     237     390 .. 0.83

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 2.8e-10
  Glyco_transf_21  11 dpvgvnpKvnnllqaleaakydllvisDsdvrvkpdyLeellaale 56 
                      ++ g npK+ nl++++  ak d+++i+D++v v +  + +++ +l 
       KHJ32303.1 160 SRLGPNPKIQNLSRGYHDAKGDIIWILDCNVWVGTGVMGRMVDKLC 205
                      67899************************************99874 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 1e-06
  Glyco_transf_21  73 kglaaaleaafl.ntlagvlqa..klsglgfavGksmalrreaLeai........GGfealadeLAeDyalgkllraaGl 141
                       +++++le +f+ + +a+ ++a  ++s + + vGks ++r++ L+ +        +G+  +++ ++eD+ +g  l ++ +
       KHJ32303.1 270 GSFGGRLEEVFMgSSHAKNYTAinTVSVAPCLVGKSNMFRKSHLDYLthgksnlpSGLDFFSQFICEDHIIGDTLWRNKV 349
                      57999******978999999999888999****************985555555569999************99988766 PP

>> Glyco_tranf_2_3  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0     9e-06     0.054       9     100 ..      86     192 ..      79     211 .. 0.72
   2 ?    2.2   0.0     0.023   1.4e+02     137     229 ..     277     390 ..     235     391 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 9e-06
  Glyco_tranf_2_3   9 ptfneedvlgevlesllaqeypr..vevvvvv.desdaetle............vaeelaaalpdvrvrvvvna.rnlgstgksralnealrav 86 
                      p  + e+ l e++++  +q+yp   + ++++v + +d  +++            +a+ l ++ +d+++ + + +  +lg++ k+++l+++++ +
       KHJ32303.1  86 PIKGQEPFLYECIAAGFRQHYPKekFTIYLCVaTACD-PAVPtlklilndfssfDARILIENEDDTGIEISRSTnSRLGPNPKIQNLSRGYHDA 178
                      5556778899999999999997668999999954455.4444133444555554556666666666777555543447**************** PP

  Glyco_tranf_2_3  87 ksdlvllvDdDtvv 100
                      k+d+++++D  + v
       KHJ32303.1 179 KGDIIWILDCNVWV 192
                      ********976655 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.023
  Glyco_tranf_2_3 137 galefaerhlrflaarralgv.ltlnGsgslirrevlkele........gldp.lflltdDyelglrlrragfrtayvpgaa...........v 209
                        ++++  h+++  a ++++v ++l G   ++r + l+ l         gld+ +  + +D ++g +l+r+++      +++           +
       KHJ32303.1 277 EEVFMGSSHAKNYTAINTVSVaPCLVGKSNMFRKSHLDYLThgksnlpsGLDFfSQFICEDHIIGDTLWRNKVEEEKSGQKFykhglvlgdlaI 370
                      55666677777788888889658888999999**999999999999999999988888899999999999776555333333222223344336 PP

  Glyco_tranf_2_3 210 revfpsslkayikqrnRwvy 229
                      + +   s+++y+ +r Rw++
       KHJ32303.1 371 QPMADFSIQRYFDRRVRWIR 390
                      66666677777777777765 PP

>> Glycos_transf_2  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00011      0.69      67     105 ..     167     205 ..      82     218 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00011
                      HHHHHHHHHHH--SSEEEEEESSEEE-TTHHHHHHHHHH CS
  Glycos_transf_2  67 kagalnaglraatgdyilflDaDdepdpdwleklveale 105
                      k+ +l +g   a+gd+i++lD  +++  +   ++v++l 
       KHJ32303.1 167 KIQNLSRGYHDAKGDIIWILDCNVWVGTGVMGRMVDKLC 205
                      68899*******************999999999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (551 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       364  (0.0203023); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.22s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 4102.11
//
Query:       KHJ32304.1  [L=951]
Description: putative duf221 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-73  247.8  25.8    2.5e-73  246.8  25.8    1.6  1  RSN1_7TM  Calcium-dependent channel, 7TM region, putative pho
    4.2e-34  118.3   0.0    7.3e-34  117.5   0.0    1.4  1  PHM7_cyt  Cytosolic domain of 10TM putative phosphate transpo
    7.4e-33  113.5   1.1    7.4e-33  113.5   1.1    2.3  3  RSN1_TM   Late exocytosis, associated with Golgi transport


Domain annotation for each model (and alignments):
>> RSN1_7TM  Calcium-dependent channel, 7TM region, putative phosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  246.8  25.8   4.2e-77   2.5e-73       1     272 [.     381     663 ..     381     665 .. 0.98

  Alignments for each domain:
  == domain 1  score: 246.8 bits;  conditional E-value: 4.2e-77
    RSN1_7TM   1 rklivtlllvlliifwiipvafv.gllsnletltkvlpflkkilelskkllsvvtgllPtlllslllallpiilrllsklqGalsrselelsvvskyfa 98 
                 r++i+++++++l+i+w+ p+a++  +l++l++l +v++++++ l  +++ +s+v+g+ +++++sl++++lpii+r+ls  +G+ +++++e++v  k++ 
  KHJ32304.1 381 RRIINNMWVAVLTILWVAPNALIsVFLMSLTNLGHVWKAFRDSLAANTTWWSFVQGVASPAITSLVYLVLPIIFRRLSIQAGDRTKTDRERHVAGKLYT 479
                 799********************999************************************************************************* PP

    RSN1_7TM  99 FlvvnvFlvftlagtalslleeiid............nptsipkllaeslpkasnFfityillqglagaaleLlqlvklilflikrkflsktprdlaer 185
                 F+v+n ++vf++++t++++++++i+             + ++ +    sl++ s+F+it++l+++l gaa+++ ql++l+++++ rkf ++tpr+++e+
  KHJ32304.1 480 FFVFNFLIVFSMFSTIWNFVSSVINatstgtdawqaiFNAEFGTATFISLCDISPFWITWLLQRNL-GAAIDFSQLWNLVWSTCVRKFSNPTPREIIEL 577
                 *******************999999999999999888778899999999*****************.*******************************7 PP

    RSN1_7TM 186 ytkppsfdygteypkvllifvialiYsviaPlilpfaliyfllgylvykyqllyvydtkyesgGklwpralnrllvglvlfqlllig 272
                 + +p+ fdy+++y+++l++++++l+++ ++Pl+lp +++yf+++y+ +ky lly++ tk+esgG++w++  nr++++++l++l+ ++
  KHJ32304.1 578 T-APQAFDYASYYNYFLFYSTVTLCFAFLQPLVLPACALYFAVDYYLKKYLLLYIFITKTESGGMFWQMFYNRMVFATILSNLVAFL 663
                 7.*********************************************************************************9987 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.5   0.0   1.2e-37   7.3e-34       1     176 []     201     370 ..     201     370 .. 0.90

  Alignments for each domain:
  == domain 1  score: 117.5 bits;  conditional E-value: 1.2e-37
    PHM7_cyt   1 srTvlvtgiPkelrseeklkeffeelypgkvvesvqivrdvkkldklveerekavrkleaalskykkngkklpkkrpthklgfl....glkligkkvda 95 
                 +rT+++ +iP+++rs+e+++ +++++ p++  +++ i+r+vk+l++l++++++ vr+le++l+ky+k++k+lp+ rp++ +++      +   g+k+da
  KHJ32304.1 201 ARTLMLNDIPRQYRSDEGINILIDKVAPTSSFSRTAIARNVKDLPELINDHNHSVRELERYLAKYLKDPKNLPAHRPKCYPSKSdparDTYPKGQKIDA 299
                 69**************************************************************************99988876333344558****** PP

    PHM7_cyt  96 idyyrekleeldeeieeerekvkk.kplgaaFvtfesersaaavakqakcaaqiqqssnptlkpkkwtvelAPePrDviWeN 176
                 i y++ ++++l+ e+++ r  v++ +pl+++F +++ +++ +a+a    +a    +++    +p++ t+ + P P+D+iW+N
  KHJ32304.1 300 IGYLTLRIKQLELEVQQIRMAVDNrDPLPYGFASYDAIEECHAIA----FA---AKKK----QPHGATIVPSPRPNDIIWKN 370
                 **********************88359***************996....32...2222....368999*************9 PP

>> RSN1_TM  Late exocytosis, associated with Golgi transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.5   1.1   1.2e-36   7.4e-33       2     155 ..      31     177 ..      30     178 .. 0.93
   2 ?   -2.6   0.3      0.69   4.1e+03      79      97 ..     482     497 ..     475     515 .. 0.45
   3 ?   -4.5   0.5       2.6   1.6e+04      11      23 ..     593     605 ..     584     621 .. 0.51

  Alignments for each domain:
  == domain 1  score: 113.5 bits;  conditional E-value: 1.2e-36
     RSN1_TM   2 lltslvinlvlalvflllFlilRkknkrvYaprtylkgeeertpplpqkglfgWipallkisdeeilekaGLDayvflrflkmlikiflvlavlalivL 100
                 +++sl++++++++++ + F++lR+ n+ vYap+ + + +++++pp   kg+f+W+++ll++s++e+ + +GLDa+vflr+l m+++if+  a++++++L
  KHJ32304.1  31 VIASLGTSIGFTALLTIGFSLLRPYNSVVYAPKLKVA-DHKHAPPTLGKGIFAWFKPLLETSEKELEDVVGLDALVFLRILAMCRNIFIATALIGCFIL 128
                 789******************************9987.9************************************************************ PP

     RSN1_TM 101 lPvnatggegedskesksgldklsisnvsegsnrlwahvvvayiftglvlyllyr 155
                  P+n+ +g++++ k+    + k  ++ +++  ++ w  +++a++f ++++ +l++
  KHJ32304.1 129 APINIINGTQKNAKF----IFK--VTPINTFGRANWGMAICAWLFNFIICGFLWW 177
                 **********97765....445..55555566899******************97 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.69
     RSN1_TM  79 lrflkmlikiflvlavlal 97 
                 +  + +++ +f+    +  
  KHJ32304.1 482 VFNFLIVFSMFS---TIWN 497
                 222222233333...3333 PP

  == domain 3  score: -4.5 bits;  conditional E-value: 2.6
     RSN1_TM  11 vlalvflllFlil 23 
                 ++  ++ l+F++l
  KHJ32304.1 593 LFYSTVTLCFAFL 605
                 2223333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (951 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       613  (0.0341904); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 6364.91
//
Query:       KHJ32305.1  [L=634]
Description: putative ubiquitin carboxy terminal hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-34  119.8   0.8    2.4e-30  105.9   0.1    2.4  2  UCH       Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.9   0.1   1.3e-34   2.4e-30       1     224 [.      49     453 ..      49     464 .. 0.86
   2 !   12.1   0.0   5.5e-06     0.098     224     257 .]     593     628 ..     581     628 .. 0.83

  Alignments for each domain:
  == domain 1  score: 105.9 bits;  conditional E-value: 1.3e-34
                 -EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTH............HHHHHHHHHHHHH..SH-CCEE--HHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxx..xxxxxxxxxxxxxxxx RF
         UCH   1 tGlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkge............lakalkdlfkell..kskskavsPkklkktl 85 
                 +Gl N Gn C++n++lQ+L+ +  lr yl++  ++ k +      ++ ++  ++g             + + lk+++ +l+     +k +s   ++k+l
  KHJ32305.1  49 VGLFNPGNDCFINAILQALAGLGDLRVYLIRETHRRKLDGLGVYAQAVQNPVRNGLprwkleglqlgiVTQGLKEILDALNerPIYKKTISAGVFIKVL 147
                 69************************9999966666666555444444443444426899*********************9966789*********** PP

                 HHHSGGGTSSSTCEHHHHHHHHHHHHHHHHCCHCCCHHH.....HHHCCCTTSHHHHHH-EEEEE.................................. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxx.................................. RF
         UCH  86 sklaksfsgykqqDaqEflaflLdqlhedlnrevaeekw.....kkhlkrndslitdlfegqlks.................................. 145
                 ++  k+  + +qqDaqEf++++ ++l ++ ++  ++ +      ++++ + + + + l + +l+                                   
  KHJ32305.1 148 EEAFKQKISVQQQDAQEFFQVVAERLCDEYHA-GQRVRScvriaQNKIMSSEATNVILTQVELEAptlegnnldtaefeerdqpvsiepgvvtlsvnne 245
                 *99999668*****************999999.333333223234444444444444444444448888888888888889999999999999999999 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
         UCH 146 ................................................................................................... 145
                                                                                                                    
  KHJ32305.1 246 nncltseleegfpfeggtesqiecltcgfqpkstistfcsltlslpqvssttlsscfdqsfkteyvedfkcekcrlvhaletfkkqlsstnceisrdks 344
                 99999999999999999999******************************************************************************* PP

                 .....................................EEEEEEB-SEEEEEEESEEETEE..EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-BEEEE CS
                 .....................................xxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 146 .....................................klklkrlPeiLiihlkRfsynss..ksKlntkvefpeeldlssylaeekkkkteekkkYeLi 205
                                                      + +++++P++L ihl+R  ++      K++ kv fpe l+l  +++   kk       Y+L+
  KHJ32305.1 345 rkaieiiqtaiennpeenlkdiempdlkfapkrkiakHARITNFPKVLAIHLSRSIFDAGhcTMKNSAKVLFPELLSLGGLVN---KK------LYRLS 434
                 *********************************************************98899*****************9887...44......4**** PP

                 EEEEEESCTTSEEEEEEEE CS
                 xxxxxxxxxxxxxxxxxxx RF
         UCH 206 avvvHsGslssGHYvayik 224
                 +vv+H+Gs++sGHY ++++
  KHJ32305.1 435 SVVCHKGSHNSGHYESFRR 453
                 **************99988 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 5.5e-06
                 ECTTTTEEEEEETTEEEEE-HHCCCTT...CEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxx RF
         UCH 224 knekngkWykydDetvkevkeeeevls...sayiLfY 257
                 k+++  +W++++De++ke+k   +vl    ++y+LfY
  KHJ32305.1 593 KRKNIDRWWRISDEKIKECKTV-DVLAmqrEVYLLFY 628
                 4445567*************66.6666788******* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (634 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1315  (0.0733449); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.42
# Mc/sec: 4544.26
//
Query:       KHJ32306.1  [L=347]
Description: putative pre-rrna-processing protein ipi1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.6e-27   93.9   0.1    8.3e-26   90.6   0.0    2.5  2  Ipi1_N    Rix1 complex component involved in 60S ribosome mat
  ------ inclusion threshold ------
      0.018   14.6   0.0       0.35   10.4   0.1    2.2  2  CLASP_N   CLASP N terminal
      0.096   12.8   0.2       0.21   11.7   0.0    1.6  2  DUF4531   Domain of unknown function (DUF4531)


Domain annotation for each model (and alignments):
>> Ipi1_N  Rix1 complex component involved in 60S ribosome maturation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1       0.2   1.2e+03      26      39 ..      76      89 ..      53     126 .. 0.67
   2 !   90.6   0.0   1.4e-29   8.3e-26       3     102 .]     134     230 ..     132     230 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.2
      Ipi1_N 26 redslkfLdllLev 39
                r+d+l+fL+  +  
  KHJ32306.1 76 RKDALSFLESQIST 89
                67777777766554 PP

  == domain 2  score: 90.6 bits;  conditional E-value: 1.4e-29
      Ipi1_N   3 laphaeslllyirsAmTHispdIredslkfLdllLevapeelvssa..wvktLnnflallgwskeksskgstsakatsssssskktskksrlkvLsvla 99 
                 +   ae++lly+r++mTH+s +Ir d+l fL++lL va+ee+vs++  w+ktL++f++l+gw+ +++  ++t+     ++ s  +  +k+  k+L+v++
  KHJ32306.1 134 IVDRAENILLYVRAGMTHLSLEIRLDALLFLEWLLGVAEEEVVSCPggWLKTLKCFMSLMGWAISSEAGKWTTG----TKASFPN-VGKAFPKQLQVFT 227
                 667799********************************************************998888888874....4444444.67899******** PP

      Ipi1_N 100 kfL 102
                 kfL
  KHJ32306.1 228 KFL 230
                 *98 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   5.8e-05      0.35      17      76 ..      69     129 ..      49     153 .. 0.79
   2 ?    1.8   0.0     0.025   1.5e+02     138     189 ..     292     344 ..     288     346 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 5.8e-05
     CLASP_N  17 telnwdaReknilklrslikgn.vpedaveelleclkqlleailkalssLrttlsstgchl 76 
                 + +++++R++++  l s i+   v+ + + +  ++l++ll +il+  +s+r++l + +++l
  KHJ32306.1  69 NSKSVNQRKDALSFLESQISTSdVNYQIPLSTSTLLQKLLPLILDESASVRSQLLKVLGLL 129
                 4578888899999999988888888888888888898999999999999999888877776 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.025
     CLASP_N 138 alqdKnvqpReysaiwLkilltrfe.shkskleasllldliekslkkgleDan 189
                 a +d+ +++R +   +L+++ t  +  +++  e       +e++lkk++ D+n
  KHJ32306.1 292 AYVDRKARQRVFQKRFLSVVQTGTQkARTEGGETGRAAANLEEILKKVMIDPN 344
                 678999*************999888344555555667799*********9998 PP

>> DUF4531  Domain of unknown function (DUF4531)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   3.5e-05      0.21     116     160 ..      31      75 ..      13      96 .. 0.84
   2 ?   -3.1   0.0       1.2   7.1e+03      55      92 ..     282     319 ..     272     321 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 3.5e-05
     DUF4531 116 lwkdrkirgkeyvvnrnrygveplwrasdyvpylsapqrpryttq 160
                  + d + ++k  vvn++  ++ +++++s+++ yls     +   q
  KHJ32306.1  31 NFTDTSFKSKSIVVNKQSLRISAPSQSSQFIHYLSLASNSKSVNQ 75 
                 5789999****************************9888776666 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.2
     DUF4531  55 yklpraldsp.freaytrwhgcfqsrerslpsaytqrlr 92 
                 ++ pr++d   + +  +  ++ fq+r  s+  + tq+ r
  KHJ32306.1 282 FETPRDVDGEaYVDRKA-RQRVFQKRFLSVVQTGTQKAR 319
                 55666666431333333.356777777777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2601.06
//
Query:       KHJ32307.1  [L=137]
Description: putative bzip transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.5e-08   32.8  10.7    5.5e-08   32.8  10.7    2.1  2  bZIP_1          bZIP transcription factor
    4.4e-05   23.9   6.0    4.4e-05   23.9   6.0    1.8  2  bZIP_Maf        bZIP Maf transcription factor
    0.00041   20.4  12.9    0.00041   20.4  12.9    2.9  3  bZIP_2          Basic region leucine zipper
  ------ inclusion threshold ------
      0.027   14.9   6.8      0.027   14.9   6.8    2.3  3  ZapB            Cell division protein ZapB
      0.032   14.2   0.3      0.036   14.0   0.3    1.1  1  Lipase_GDSL     GDSL-like Lipase/Acylhydrolase
       0.04   14.3   0.9       0.11   12.8   0.1    2.0  2  SPOR            Sporulation related domain
      0.069   13.0   4.4       0.12   12.2   4.4    1.4  1  DUF724          Protein of unknown function (DUF724)
      0.087   12.1   4.0        0.1   11.9   4.0    1.1  1  CorA            CorA-like Mg2+ transporter protein
      0.099   12.1   1.1       0.25   10.8   0.1    2.1  3  POTRA_3         POTRA domain
       0.12   12.0   0.0       0.17   11.5   0.0    1.3  1  Ras             Ras family
       0.13   12.5   4.2       0.11   12.8   2.2    1.8  2  BLOC1_2         Biogenesis of lysosome-related organelles com
        0.9    9.0   8.9        2.4    7.6   4.7    2.0  2  FIN1            Filaments in between nuclei protein-1
        2.2    9.0   5.8        2.3    8.9   3.3    2.0  3  YabA            Initiation control protein YabA


Domain annotation for each model (and alignments):
>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.5       1.5     2e+03      29      45 ..      21      37 ..      14      54 .. 0.57
   2 !   32.8  10.7     4e-11   5.5e-08       7      62 ..      70     125 ..      67     130 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.5
                HHHHHHHHHHHHHHHHH CS
      bZIP_1 29 eeLerrvkaLekeNksL 45
                 +  r + ++ k+N+++
  KHJ32307.1 21 RQIPRNANVIRKKNAKY 37
                44444555555555554 PP

  == domain 2  score: 32.8 bits;  conditional E-value: 4e-11
                 XXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   7 ekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekLksk 62 
                  kr+++NR aA +sR+RK+ +ie+Le+  k+L+ e  s k+ l++  ++++ L+ +
  KHJ32307.1  70 NKRLLRNRLAALESRERKKRYIEKLEKDNKQLSDELNSTKEDLDRALEKINHLERQ 125
                 59******************************************999999988765 PP

>> bZIP_Maf  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   1.0       3.9   5.4e+03      43      52 ..      16      25 ..       9      38 .. 0.50
   2 !   23.9   6.0   3.2e-08   4.4e-05      26      90 ..      64     128 ..      49     130 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 3.9
    bZIP_Maf 43 kscrkrrlqq 52
                k+ r+r++ +
  KHJ32307.1 16 KKVRRRQIPR 25
                4444444433 PP

  == domain 2  score: 23.9 bits;  conditional E-value: 3.2e-08
    bZIP_Maf  26 verLKqrRRrlKNrgyakscrkrrlqqkeelekekeeleeelerlqqelsrlrqekdalkrkneq 90 
                 v+rL    R l+Nr++a ++r+r+    e+lek +++l+ el+++++ l+r+ ++ + l r+ + 
  KHJ32307.1  64 VIRLIGNKRLLRNRLAALESRERKKRYIEKLEKDNKQLSDELNSTKEDLDRALEKINHLERQAAH 128
                 67777889*******************************************99988888877665 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   1.2       1.5   2.1e+03       2      10 ..      13      21 ..      12      36 .. 0.69
   2 !   20.4  12.9     3e-07   0.00041       8      42 ..      71     106 ..      68     125 .. 0.89
   3 ?    1.4   0.3      0.25   3.5e+02      21      38 ..     113     130 ..     106     137 .] 0.64

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.5
                XXXXXXXXX CS
      bZIP_2  2 ddeyrerRr 10
                +d +++rRr
  KHJ32307.1 13 SDHKKVRRR 21
                567777777 PP

  == domain 2  score: 20.4 bits;  conditional E-value: 3e-07
                 XXX.XXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2   8 rRr.kNreAarrsRekkkakeeeleervkeLeeeNa 42 
                 +R  +Nr Aa  sRe+kk + e+le+ +k+L+ e +
  KHJ32307.1  71 KRLlRNRLAALESRERKKRYIEKLEKDNKQLSDELN 106
                 999****************************99865 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.25
                 HHHHHHHHHHHHHHHHHH CS
      bZIP_2  21 ekkkakeeeleervkeLe 38 
                 +++ +k + le+++ +L+
  KHJ32307.1 113 DRALEKINHLERQAAHLK 130
                 566666666666666665 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1       1.7   2.3e+03      42      66 ..      28      52 ..      10      55 .. 0.59
   2 ?   14.9   6.8   1.9e-05     0.027      16      70 ..      67     120 ..      62     121 .. 0.88
   3 ?   -1.0   0.1       1.9   2.6e+03      57      70 ..     124     137 .]     122     137 .] 0.80

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 1.7
        ZapB 42 releeeneqlkeereawqerlkkLL 66
                + ++++n + +  + ++ e +++L+
  KHJ32307.1 28 NVIRKKNAKYEIPPGETLENIDQLI 52
                4444555555555555555555555 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1.9e-05
        ZapB  16 aidtitlLqmeieeLkeeneelkeenreleeeneqlkeereawqerlkkLLgkle 70 
                 +i + +lL++++++L+ + +  k+ +++le+ n+ql +e ++++e l+  L+k++
  KHJ32307.1  67 LIGNKRLLRNRLAALESRER-KKRYIEKLEKDNKQLSDELNSTKEDLDRALEKIN 120
                 6777899********87655.5677****************************98 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 1.9
        ZapB  57 awqerlkkLLgkle 70 
                  + ++lk +++k++
  KHJ32307.1 124 RQAAHLKIVIEKIR 137
                 67789999999986 PP

>> Lipase_GDSL  GDSL-like Lipase/Acylhydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.3   2.6e-05     0.036      85     161 ..      30     112 ..      13     129 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2.6e-05
                  ECSSCTTTCEEHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-SSTCH......CTCCCCHCCHHHHHHHHHHHHHHHHHHHHHC CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Lipase_GDSL  85 gkkstdaakkeaeeyiknlreaikelkeegapkaivvlvsppglgp......qeekdakklgekgnefvgeynqrlndlaekd 161
                   +k++ +++ ++ e  +n++++i e +  g +ka++ l++   l +      ++++++k   ek+ ++ ++ +++ln++ e+ 
   KHJ32307.1  30 IRKKNAKYEIPPGETLENIDQLIAEAHGRGDKKAVIRLIGNKRLLRnrlaalESRERKKRYIEKLEKDNKQLSDELNSTKEDL 112
                  5788889999999***********************************99997777888888888888888888887776644 PP

>> SPOR  Sporulation related domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   8.3e-05      0.11      14      66 ..      44      97 ..      33     104 .. 0.90
   2 ?   -0.9   0.1       1.6   2.2e+03      53      65 ..     108     120 ..     107     131 .. 0.61

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 8.3e-05
                -HHHHHHHHHHCCHHT--...EEECCSSSCEEEEESSBCTCCHHHHHHHHCH.H CS
        SPOR 14 seanAerlaakLrakgfaaavavvsgggglyrVrvGpfasreeAqaalkkLk.a 66
                + +n ++l+a+  ++g + av++ +g++ l r r+ + +sre  ++ ++kL  +
  KHJ32307.1 44 TLENIDQLIAEAHGRGDKKAVIRLIGNKRLLRNRLAALESRERKKRYIEKLEkD 97
                679*************99999******************************942 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.6
                 TCCHHHHHHHHCH CS
        SPOR  53 sreeAqaalkkLk 65 
                 ++e+ ++al+k+ 
  KHJ32307.1 108 TKEDLDRALEKIN 120
                 5666666666665 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   4.4   8.6e-05      0.12      98     150 ..      78     130 ..      65     137 .] 0.85

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 8.6e-05
      DUF724  98 lslkdeqtklleerkklekkieeeesekrkleeeidelekkilelerqlallk 150
                 l+  ++++++++ ++klek+ ++ ++e ++ +e++d   +ki +lerq+a+lk
  KHJ32307.1  78 LAALESRERKKRYIEKLEKDNKQLSDELNSTKEDLDRALEKINHLERQAAHLK 130
                 4455778889999999999999999*************************998 PP

>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   4.0   7.3e-05       0.1     129     218 ..      43     129 ..      26     136 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.3e-05
        CorA 129 kleeeldeledeledstkkeilrelaqlrrrlvklrralapnrevlkrlla..kaddkllddedkeylrdlldelerllemlealrerlesl 218
                 +  e++d+l  e + + +k+ + +l+   +rl + r a++++re  kr+++   +d+k+l+de    l+   ++l+r+le++++l +++  l
  KHJ32307.1  43 ETLENIDQLIAEAHGRGDKKAVIRLIG-NKRLLRNRLAALESRERKKRYIEklEKDNKQLSDE----LNSTKEDLDRALEKINHLERQAAHL 129
                 555677888888888889999999998.899***************99999665666666655....7999999999999999998887666 PP

>> POTRA_3  POTRA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       1.8   2.5e+03      41      56 .]      26      41 ..      25      41 .. 0.82
   2 ?   -3.0   0.0       3.8   5.2e+03      33      39 ..      46      52 ..      45      64 .. 0.75
   3 ?   10.8   0.1   0.00018      0.25      34      55 ..     111     132 ..     110     132 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.8
                HHTSSSEE.EEEEEEE CS
     POTRA_3 41 qlnRlpsnqaeiqIlP 56
                + n  ++++a+ +I P
  KHJ32307.1 26 NANVIRKKNAKYEIPP 41
                6788899999999976 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.8
                HHHHHHH CS
     POTRA_3 33 rdiEQGl 39
                  i+Q +
  KHJ32307.1 46 ENIDQLI 52
                5677766 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 0.00018
                 HHHHHHHHHTSSSEE.EEEEEE CS
     POTRA_3  34 diEQGleqlnRlpsnqaeiqIl 55 
                 d++ +le +n l ++ a+++I+
  KHJ32307.1 111 DLDRALEKINHLERQAAHLKIV 132
                 9******************996 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00012      0.17      79     120 ..      37      89 ..      20     128 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00012
                 EETTBHHHHHTHHHHHHHHHHHSTTTSEEEEEEETTTGGG...........G- CS
         Ras  79 yditsresfenvkkwveeikrvaeenvpivLvGnKvDlee...........kr 120
                 y+i   e++en+++++ e +   +++ +i L+GnK  l++           kr
  KHJ32307.1  37 YEIPPGETLENIDQLIAEAHGRGDKKAVIRLIGNKRLLRNrlaalesrerkKR 89 
                 8899999****************************999985555554443333 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       2.2   3.1e+03      51      70 ..      31      51 ..      21      54 .. 0.64
   2 ?   12.8   2.2   7.8e-05      0.11      40      83 ..      92     135 ..      76     136 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 2.2
     BLOC1_2 51 eklnekye.elqpylqqidqi 70
                 k n+kye    + l++idq+
  KHJ32307.1 31 RKKNAKYEiPPGETLENIDQL 51
                455666665556677777765 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 7.8e-05
     BLOC1_2  40 kdvaaslekkleklnekyeelqpylqqidqiekqvteLeeavse 83 
                 ++  ++ ++ +++ln+++e l+  l++i+ +e+q ++L+ ++++
  KHJ32307.1  92 EKLEKDNKQLSDELNSTKEDLDRALEKINHLERQAAHLKIVIEK 135
                 4455666777888999999*******************999987 PP

>> FIN1  Filaments in between nuclei protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.3    0.0089        12     185     242 ..      20      83 ..       6      84 .. 0.66
   2 ?    7.6   4.7    0.0018       2.4     190     240 ..      81     129 ..      65     131 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0089
        FIN1 185 kegks.kksetrkksvkfelpeddeeeeikkelkdi.....kklleellerqdelesrlsklee 242
                 + ++  + +  rkk+ k+e+p  ++ e+i + + +      kk   +l+  ++ l +rl+ le+
  KHJ32307.1  20 RRQIPrNANVIRKKNAKYEIPPGETLENIDQLIAEAhgrgdKKAVIRLIGNKRLLRNRLAALES 83 
                 333333677889*********9998899987665543333356677777777888888888876 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0018
        FIN1 190 kksetrkksvkfelpeddeeeeikkelkdikklleellerqdelesrlskl 240
                  +s+ rkk   ++l +d+  +++++el+  k+ l ++le++++le + ++l
  KHJ32307.1  81 LESRERKKRYIEKLEKDN--KQLSDELNSTKEDLDRALEKINHLERQAAHL 129
                 47899999999***9996..*************************998877 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.2   1.6e+03      45      79 ..      15      54 ..       8      57 .. 0.62
   2 ?   -1.0   0.0         2   2.8e+03      44      55 ..      70      81 ..      38      90 .. 0.46
   3 ?    8.9   3.3    0.0017       2.3       9      52 ..      90     133 ..      81     137 .] 0.88

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.2
                HHHHHHHH.....XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        YabA 45 neklrerl.....eeeekkekekkkelsegkenLarlYee 79
                 +k+r+r+     +  +kk+++ +   +e+ en+ +l  e
  KHJ32307.1 15 HKKVRRRQiprnaNVIRKKNAKYEIPPGETLENIDQLIAE 54
                5566666666554444555566666667777777777655 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2
                HHHHHHHHHXXX CS
        YabA 44 eneklrerleee 55
                +++ lr+rl+  
  KHJ32307.1 70 NKRLLRNRLAAL 81
                233456666333 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.0017
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA   9 kleeleeqleelleeleelkeelaelleenaeLeleneklrerl 52 
                  +e+le++ ++l++el++ ke+l + le+ ++Le +  +l+  +
  KHJ32307.1  90 YIEKLEKDNKQLSDELNSTKEDLDRALEKINHLERQAAHLKIVI 133
                 5789********************************99998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1860  (0.103743); expected 358.6 (0.02)
Passed bias filter:                      807  (0.0450109); expected 358.6 (0.02)
Passed Vit filter:                       149  (0.00831056); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 1063.98
//
Query:       KHJ32308.1  [L=751]
Description: putative kinesin family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
     2e-117  391.9   0.6   6.2e-117  390.2   0.0    2.0  2  Kinesin      Kinesin motor domain
    9.3e-29  100.3   0.1    6.8e-28   97.5   0.0    2.3  2  Microtub_bd  Microtubule binding
     0.0035   17.5   0.1      0.016   15.3   0.0    2.3  2  AAA_33       AAA domain
  ------ inclusion threshold ------
      0.042   14.1   4.7       0.14   12.4   4.3    2.1  2  Herpes_UL14  Herpesvirus UL14-like protein


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  390.2   0.0  1.4e-120  6.2e-117      25     333 .]      80     381 ..      16     381 .. 0.89
   2 ?   -0.7   0.2      0.12   5.2e+02      32     274 ..     568     604 ..     502     634 .. 0.60

  Alignments for each domain:
  == domain 1  score: 390.2 bits;  conditional E-value: 1.4e-120
                 TCEEEEEEEEECTTSCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHTBCTTTSBSHHHHHHHHHHHHHHHCTTTHEE CS
     Kinesin  25 keeekkskkenkeeeekkfkFdkvfdeeatqeevyeetakplvesvleGynatifaYGqtgsGKTyTmegkeeeeeGiipraleelFesikkekeekek 123
                 + + +  ++  k+ ++++f+Fd+vfde++tq+evye+ta++l++svl+Gynat+faYG+tg+GKT+T++g+  +++Gii+ +++elFe+i+++++e  k
  KHJ32308.1  80 RFSRSVVSNMGKRVKDQTFAFDRVFDENTTQAEVYESTARELLDSVLDGYNATVFAYGATGCGKTHTITGT-AQQPGIIFLTMQELFEKIAERNDE--K 175
                 4455556677788999******************************************************9.999****************99988..8 PP

                 EEEEEEEEEEEETTEEEETTSTTTTSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTSTTSSCTSHHCCSEEEEEEEEEEEETTTT CS
     Kinesin 124 efsvkvsylEiYneeiyDLLeskkskkkkklkiredskkgevyvkgltevevksaeevlellekgeknrkvaetklneeSSRSHavftitleqknlkee 222
                 +++v++sylEiYne+i+DLL +    +k+ l +red+++  v v+gl++++ +++++v++++ +g++ r+v+ t++n++SSRSHav++i++ qk+++++
  KHJ32308.1 176 QTDVSLSYLEIYNETIRDLLVPGG--SKQGLMLREDANQA-VSVAGLSSHHPRDVQQVMDMIVTGNEFRTVSPTAANATSSRSHAVLQINVAQKDRNAD 271
                 89********************94..5667********86.*********************************************************9 PP

                 TCEEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTSTSCGGGSHHHHHTGGGHSSSSEEEEEEEE-TBGGGHHHHH CS
     Kinesin 223 teekvkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaekkkskhipYRdSkLTrlLqdsLgGnsktlmivtvspssenleetl 321
                  +e +++++l+++DLAGsEras+t++ +g+rl E+aniNkSLlaLg++i+aL++++k++h+pYR+SkLTrlL+ sLgGn+kt+miv+vspss +++et 
  KHJ32308.1 272 VSEPHTMATLSIIDLAGSERASATKN-RGDRLLEGANINKSLLALGSCINALCDPRKKNHVPYRNSKLTRLLKFSLGGNCKTVMIVCVSPSSAHFDETQ 369
                 99999********************6.7999******************************************************************** PP

                 HHHHHHHHHCTT CS
     Kinesin 322 stlkfaerakei 333
                 +tl++a+rak+i
  KHJ32308.1 370 NTLRYANRAKNI 381
                 **********98 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.12
                 EEEECTTSCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHTBCTTTSBSHHHHHHHHHHHHHHHCTTTHEEEEEEEEE CS
     Kinesin  32 kkenkeeeekkfkFdkvfdeeatqeevyeetakplvesvleGynatifaYGqtgsGKTyTmegkeeeeeGiipraleelFesikkekeekekefsvkvs 130
                 ++                                                                                                 
  KHJ32308.1 568 AN------------------------------------------------------------------------------------------------- 569
                 33................................................................................................. PP

                 EEEEETTEEEETTSTTTTSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTSTTSSCTSHHCCSEEEEEEEEEEEETTTTTCEEEEE CS
     Kinesin 131 ylEiYneeiyDLLeskkskkkkklkiredskkgevyvkgltevevksaeevlellekgeknrkvaetklneeSSRSHavftitleqknlkeeteekvki 229
                                                                                                                    
  KHJ32308.1   - ---------------------------------------------------------------------------------------------------   -
                 ................................................................................................... PP

                 EEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHH CS
     Kinesin 230 sklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaL 274
                            Er ++t+  e e+  + ++i   L+a  ++is+L
  KHJ32308.1 570 ----------AERDAQTELFELEKNFDKCEIQSLLTAQIEIISSL 604
                 ..........34444444433344444444444444444444444 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.5   0.0   1.5e-31   6.8e-28      43     149 .]      83     195 ..      10     195 .. 0.84
   2 ?   -0.6   0.1      0.25   1.1e+03      43      74 ..     563     601 ..     535     610 .. 0.70

  Alignments for each domain:
  == domain 1  score: 97.5 bits;  conditional E-value: 1.5e-31
                  T.........TTTEEEE-SEEEECTTHCCCCCCCC.HHHHHHHHTT--EEEEEEES................ST-HCHHHHHHHHHHCCTSCCCCEEE CS
  Microtub_bd  43 e......eekkkkkefsFdrvfeseseqeevfeei.sqlvqsaldgynvcifaygqTGsGKtyTmegeeeeagmipraveeifetiselkekgwkyei 133
                  +       ++ k+++f Fdrvf+++++q+ev+e + + l++s+ldgyn ++fayg TG GKt+T++g+ +++g i  +++e+fe+i+e+ + +++ ++
   KHJ32308.1  83 RsvvsnmGKRVKDQTFAFDRVFDENTTQAEVYESTaRELLDSVLDGYNATVFAYGATGCGKTHTITGTAQQPGIIFLTMQELFEKIAER-NDEKQTDV 179
                  144555667899*******************9986368**************************************************9.68999*** PP

                  EEEEEEEESS-EEETT CS
  Microtub_bd 134 elqfveiynekvqDlL 149
                  +l+++eiyne+++DlL
   KHJ32308.1 180 SLSYLEIYNETIRDLL 195
                  ***************8 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.25
                  T..........TTTEEEE-SEEEECTTHCCCCCCCCHHH CS
  Microtub_bd  43 e.......eekkkkkefsFdrvfeseseqeevfeeisql 74 
                          e + +++ f++++ f++ + q+ ++ +i+ +
   KHJ32308.1 563 AallkanaERDAQTELFELEKNFDKCEIQSLLTAQIEII 601
                  1333344477899999********999999999888765 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   3.6e-06     0.016       2      67 ..     133     195 ..     133     280 .. 0.71
   2 ?   -3.7   0.0       2.8   1.3e+04     114     132 ..     373     389 ..     350     401 .. 0.54

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.6e-06
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdtlrrrlfgtdqqsktdytrvldrlyqilnelarkal 67 
                 v+  G+ G+GK++ +++ +++ g ++l+  +l+++++++ ++++   t+v+ +  +i ne++r+ l
  KHJ32308.1 133 VFAYGATGCGKTHTITGTAQQPGIIFLTMQELFEKIAERNDEKQ---TDVSLSYLEIYNETIRDLL 195
                 5678********************************98544433...4455555555555555444 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.8
      AAA_33 114 RlakRaangddrsevpeea 132
                 R a Ra+n   +++v++ +
  KHJ32308.1 373 RYANRAKN--IQTKVTRNV 389
                 23333332..222333333 PP

>> Herpes_UL14  Herpesvirus UL14-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   4.3   3.1e-05      0.14      30     121 ..     358     453 ..     353     481 .. 0.84
   2 ?   -0.3   0.1      0.26   1.2e+03      51      77 ..     457     483 ..     443     548 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.1e-05
  Herpes_UL14  30 vstqdPaFveaFtaAkeaeedlkaqlrsdaRlesvrrkikriqakveeqaelrsiLkanRryls....pkllerldatedkllekedsLeeavael 121
                  vs++  +F e     + a+ + ++q ++   +  v+r++k+   k++eq+++ + Lka+ + l+    +k++++ ++ e  + e + ++  a ++ 
   KHJ32308.1 358 VSPSSAHFDETQNTLRYANRAKNIQTKVTRNVFNVNRHVKDFLVKIDEQMAMINDLKAQQKDLEtlafSKFKKQCEKRESIMREGITRIRAAYDHS 453
                  788888888988999999*******************************************99844446888888888888888888888888775 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.26
  Herpes_UL14  51 lkaqlrsdaRlesvrrkikriqakvee 77 
                     ++  ++Rl  ++r+i  + a v+ 
   KHJ32308.1 457 RTEKINNAKRLRQIERRICLLSAWVDA 483
                  456778899999999999998888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (751 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       993  (0.0553851); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 4768.69
//
Query:       KHJ32309.1  [L=1020]
Description: putative contractile ring protein imp2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.3e-17   61.3   0.1    2.7e-16   59.6   0.1    2.0  1  FCH       Fes/CIP4, and EFC/F-BAR homology domain
      3e-13   49.2   0.0    5.9e-13   48.2   0.0    1.5  1  SH3_1     SH3 domain
    1.1e-12   47.6   0.0    1.9e-12   46.8   0.0    1.5  1  SH3_9     Variant SH3 domain
      1e-10   41.1   0.0    3.7e-10   39.3   0.0    1.9  2  SH3_2     Variant SH3 domain
  ------ inclusion threshold ------
      0.099   12.6   1.0         24    4.9   0.0    3.2  3  DUF1759   Protein of unknown function (DUF1759)


Domain annotation for each model (and alignments):
>> FCH  Fes/CIP4, and EFC/F-BAR homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.6   0.1   7.5e-20   2.7e-16       1      77 []      26      98 ..      26      98 .. 0.96

  Alignments for each domain:
  == domain 1  score: 59.6 bits;  conditional E-value: 7.5e-20
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT----TT-.....HHHHHHHHHHHHHHHHHHHHHHH CS
         FCH  1 gfkvlqkrleqgialledlqeflkeRaeiEkeYakkLqkLakkylkrrkkkseestlvtawtvlleeteklaqshla 77
                g+++l+ r+++  +++++l++f+  Ra+iE+eYa+kL  L++k l+++    e++tl+ +++v++ e+e++++sh++
  KHJ32309.1 26 GVEPLLLRMHNAKQTCDELKSFYSSRAAIEDEYARKLLSLSRKSLGSQ----ESGTLRVSLDVVKGEVEQMGKSHQN 98
                7899******************************************76....569********************85 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.2   0.0   1.6e-16   5.9e-13       1      48 []     966    1014 ..     966    1014 .. 0.96

  Alignments for each domain:
  == domain 1  score: 48.2 bits;  conditional E-value: 1.6e-16
                  EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTS.TEEEEEEG CS
       SH3_1    1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgt.gkeGliPs 48  
                  +AlY Y+a  ++ELsf kGDv+ vl +++dgWw+++  g+  + Gl+Ps
  KHJ32309.1  966 RALYMYQAAIPEELSFAKGDVLAVLRHQDDGWWEAEIAGRnERPGLVPS 1014
                  7*************************************997789****8 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.0   5.4e-16   1.9e-12       1      49 []     967    1018 ..     967    1018 .. 0.94

  Alignments for each domain:
  == domain 1  score: 46.8 bits;  conditional E-value: 5.4e-16
       SH3_9    1 AlypyepreddeLsLqrGDvitvieesedgWlegs...ltGrtGlvPanyve 49  
                  Aly y++  ++eLs+ +GDv+ v++  +dgW+e++   +++r GlvP+nyv+
  KHJ32309.1  967 ALYMYQAAIPEELSFAKGDVLAVLRHQDDGWWEAEiagRNERPGLVPSNYVQ 1018
                  89**********************999*******9666699**********7 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.98   3.5e+03      11      22 ..     282     293 ..     279     294 .. 0.79
   2 !   39.3   0.0     1e-13   3.7e-10       2      56 ..     965    1019 ..     964    1020 .] 0.90

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.98
                 CGCCB--B-TTE CS
       SH3_2  11 edkseLsfkkGd 22 
                  ++  ++f++Gd
  KHJ32309.1 282 DPPKYINFCRGD 293
                 45666******9 PP

  == domain 2  score: 39.3 bits;  conditional E-value: 1e-13
                  EEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEECCCE...EEEEGCGEEE CS
       SH3_2    2 vraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegevgGrv...GlfPsslvee 56  
                  +ra+  y ++ ++eLsf kGdv++vl   ++ +dgwwe+e  Gr    Gl+Ps++v+ 
  KHJ32309.1  965 ARALYMYQAAIPEELSFAKGDVLAVL---RHQDDGWWEAEIAGRNerpGLVPSNYVQN 1019
                  67888899999***************...************7777789********95 PP

>> DUF1759  Protein of unknown function (DUF1759)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0    0.0089        32      46     114 ..      27      97 ..      21     107 .. 0.78
   2 ?   -2.0   0.0      0.84     3e+03      70     103 ..     121     151 ..     106     163 .. 0.68
   3 ?    4.9   0.0    0.0066        24      47      99 ..     184     237 ..     175     254 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0089
     DUF1759  46 vahlalseenYeaaveaLkkrYdnkrkiirellnelmklps..lkeedasqlrrivdavneivralealge 114
                 v+ l l  +n +++ + Lk+ Y   + i  e+  +l +l    l +++  +lr   d v   v ++ +  +
  KHJ32309.1  27 VEPLLLRMHNAKQTCDELKSFYSSRAAIEDEYARKLLSLSRksLGSQESGTLRVSLDVVKGEVEQMGKSHQ 97 
                 5667777889999**************************87335566667788888888777776665555 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.84
     DUF1759  70 krkiirellnelmklpslkeedasqlrrivdavn 103
                  rki+++ +++l k++    ++++q++++ d  +
  KHJ32309.1 121 RRKIVQSGIEKLHKVKL---QQTNQVNKTRDRYE 151
                 56777777666666554...55666666665555 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.0066
     DUF1759  47 ahlalseenYeaaveaLkkrYdnkrkiirellnelmklpslkee.dasqlrriv 99 
                  hla s++ Ye+a++aL+   ++ ++  ++  +++++l++ + +   s l ++ 
  KHJ32309.1 184 IHLAASNTEYENAIKALEDTTGRWNRDWKAAADKFQDLEEERLDfTKSSLWSFA 237
                 59999***************9999999999999999999965551334555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1020 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1354  (0.0755201); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.76u 0.31s 00:00:01.07 Elapsed: 00:00:00.46
# Mc/sec: 6689.09
//
Query:       KHJ32310.1  [L=197]
Description: putative protein cgi121 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.6e-46  156.0   3.1      1e-45  155.8   3.1    1.0  1  CGI-121   Kinase binding protein CGI-121
  ------ inclusion threshold ------
      0.081   13.2   0.0       0.15   12.4   0.0    1.4  1  DUF4358   Domain of unknown function (DUF4358)


Domain annotation for each model (and alignments):
>> CGI-121  Kinase binding protein CGI-121
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.8   3.1   1.1e-49     1e-45       1     162 []      23     193 ..      23     193 .. 0.96

  Alignments for each domain:
  == domain 1  score: 155.8 bits;  conditional E-value: 1.1e-49
                 EES-S-HHHHHHTHC..CHCTT-EEE-GGG---HHHHHHHHHHHHHHHHHS---SSSHHHHHHHHHSSSS-HHHHHHHHB--TT-S-EEEEEEESSS-- CS
     CGI-121   1 FknVknaaelrkqllskraeldfafldaslilskehllsAvlrallaaargklktktlhsEilfsLspnnnIgealkrfgisdkttsllvvkvsssead 99 
                 F n+kna++l +ql  ++ ++++af+da++ils  hl sA++ra++ + ++klkt+++hsE++fsLsp nnI+ a+ +fgi+ kt++l+vvk+s+  ++
  KHJ32310.1  23 FCNIKNASFLLEQLRLGNVHYEYAFIDAQVILSSVHLFSACFRAISCQITNKLKTRNIHSEVVFSLSPRNNIATAFLNFGITAKTNDLIVVKISDL-TQ 120
                 89*******************************************************************************************998.99 PP

                 HHHHHHHHHHHS-SEEE--SH.HHHHH--HHHHHHHTT--...........TT---SSHHHHHHHHHHHHHTX CS
     CGI-121 100 eeevlkslkevvegelvplee.eleeltdwkkikkiYklne.........leeekeeevkeledlvvsavalk 162
                 ++++ ++l++++ege  ++++ +l+++t+w ++ k+Y ++e         +++ k++e +e+e l+++++alk
  KHJ32310.1 121 HDSIKDHLSNIIEGEAEDFSDiALANITNWRRVHKLYSVTEitkaeelekKKNPKRAEISEIELLIIGTIALK 193
                 ********************************************99988755666789999**********98 PP

>> DUF4358  Domain of unknown function (DUF4358)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.6e-05      0.15      29      76 ..      95     141 ..      84     149 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.6e-05
     DUF4358  29 edyvayvsassasadevlivkakdeedaeevkkaleerledqkksfed 76 
                 + ++++ + + a+ +++++vk +d ++ +++k+ l + +e   ++f+d
  KHJ32310.1  95 ATAFLNFG-ITAKTNDLIVVKISDLTQHDSIKDHLSNIIEGEAEDFSD 141
                 55666666.78999********************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       683  (0.0380947); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1532.75
//
Query:       KHJ32311.1  [L=106]
Description: hypothetical protein EV44_g2005 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.36
# Mc/sec: 872.05
//
Query:       KHJ32312.1  [L=194]
Description: putative alba domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-24   85.7   4.3    2.4e-22   79.4   4.3    2.1  1  Rpp20     Rpp20 subunit of nuclear RNase MRP and P
    3.3e-08   33.2   1.9    0.00034   20.4   0.3    2.5  2  Alba      Alba
  ------ inclusion threshold ------
      0.053   12.9   0.3      0.071   12.5   0.3    1.1  1  Pet127    Mitochondrial protein Pet127


Domain annotation for each model (and alignments):
>> Rpp20  Rpp20 subunit of nuclear RNase MRP and P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.4   4.3     4e-26   2.4e-22       3     137 .]      48     190 ..      46     190 .. 0.86

  Alignments for each domain:
  == domain 1  score: 79.4 bits;  conditional E-value: 4e-26
       Rpp20   3 pktiyVssktpfmsavkRvqklLeqaekrataslal....................eqkkkeekkklealekkeeelkkeeVfvkatGrAiekalsvgr 81 
                  k+iy+s+k++f+  +kRv+ +Leq++ r+  + ++                       ++ +k  +e ++k+ ++ + eeV++ka G+Aiek l ++ 
  KHJ32312.1  48 SKVIYISNKSSFIGTIKRVRLFLEQIRSRSFGNDNNhiknnstsllsqqqnstsndVVLTALSKAIKEGENKNGKKIRDEEVIMKAGGKAIEKGLRLAA 146
                 79***********************999988887778999******998877654422233445555666777788899******************** PP

       Rpp20  82 wfqekeeykvrvetgsVevvDdivedeeekankaaededeeepetrtRwvsmveva 137
                 w+ ++ ++kv+ +tgsV +vDdiv +            d+ e ++r+R++s++eva
  KHJ32312.1 147 WWSSQSDVKVELRTGSVGAVDDIVDE------------DGVEESSRVRNMSYLEVA 190
                 ************************65............588899999999999996 PP

>> Alba  Alba
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.3   5.6e-08   0.00034       1      40 [.      49     114 ..      49     116 .. 0.97
   2 !   12.0   0.1   2.3e-05      0.14      27      53 ..     126     152 ..     119     163 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 5.6e-08
                 CEEEE-STS-HHHHHHHHHHHH..........................THTTESEEEEEEETTHHH CS
        Alba   1 neiyVsskspimsyvkralklL..........................snkkeeeVvlkatGraIs 40 
                 ++iy+s+ks++   +kr+  +L                          +n++ + Vvl+a+ +aI+
  KHJ32312.1  49 KVIYISNKSSFIGTIKRVRLFLeqirsrsfgndnnhiknnstsllsqqQNSTSNDVVLTALSKAIK 114
                 69*********************************************99999************96 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 2.3e-05
                 ESEEEEEEETTHHHHHHHHHHHHHHHT CS
        Alba  27 eeeVvlkatGraIskAvsvaeilkrrf 53 
                  eeV+ ka G+aI+k +++a +  ++ 
  KHJ32312.1 126 DEEVIMKAGGKAIEKGLRLAAWWSSQS 152
                 69******************9987776 PP

>> Pet127  Mitochondrial protein Pet127
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.3   1.2e-05     0.071      15     105 ..      46     142 ..      41     157 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.2e-05
      Pet127  15 keekkkyvsStSsltsvLsqlylllsnfrklnlsslskafeekskkftklarlpasvilrkkekvyaidsdk......sldkeiiLsalGkslEklL 105
                 +++k  y+s  Ss+ ++++++ l+l ++r+ ++ + +++++++s++  + ++ ++s  +  +    ai++ +        d+e i+ a Gk++Ek L
  KHJ32312.1  46 TTSKVIYISNKSSFIGTIKRVRLFLEQIRSRSFGNDNNHIKNNSTSLLSQQQNSTSNDVVLTALSKAIKEGEnkngkkIRDEEVIMKAGGKAIEKGL 142
                 567889***********************************99999986666666544444333334433322245535566888888899999977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       857  (0.0477997); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1460.71
//
Query:       KHJ32313.1  [L=318]
Description: putative 37s ribosomal protein rsm22 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-68  231.3   4.1    1.6e-68  231.1   4.1    1.0  1  Rogdi_lz  Rogdi leucine zipper containing protein


Domain annotation for each model (and alignments):
>> Rogdi_lz  Rogdi leucine zipper containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.1   4.1   8.9e-73   1.6e-68       1     266 [.      25     307 ..      25     309 .. 0.91

  Alignments for each domain:
  == domain 1  score: 231.1 bits;  conditional E-value: 8.9e-73
    Rogdi_lz   1 EleWLlkeelketlpqlkegLeeClallapedpgstLvlSssrsesvKGvvtRvGtrivkgdislrlrtlpkltlklnptkp......ivleqLtdlrt 93 
                 El+WLl++  +et+++lk+g++eCl+llap +pgstLvlSs rses+KG+vtR G++ivkg+ +lrlrt  +l+l+++p ++      + l+ L++l +
  KHJ32313.1  25 ELSWLLETLKEETFEALKSGIKECLTLLAPVNPGSTLVLSSLRSESIKGHVTRIGNQIVKGTFHLRLRTHAPLNLTISPVSStsknrgFYLPSLKTLSS 123
                 9*****8888899***********************************************************9999999544467888*********** PP

    Rogdi_lz  94 lltqaldlLdltlktgdelsks......aqflssqLrllleslseAkalLkgppepelafpang..........wttesaa.shfePplppnlsldlyi 175
                 ll+q+l++L+    ++++ ++        +++ sqLrll++  +e++++Lkg+ + + ++p+ +          w++e+ +  +f+P+lpp+l+l+++i
  KHJ32313.1 124 LLEQSLSCLNSVQFSSAQIDQIpsidsaSTSIFSQLRLLYSLFQESISILKGSNS-H-LSPNTSlatsqykaieWNEEPSEsVTFTPELPPTLALNISI 220
                 **********44444555544577788799************************9.5.6777667788888****999999****************** PP

    Rogdi_lz 176 qeaelvldlrvLepvtakpwseistsfgdkladalgtarrlehdeaeevfk.kgeeVmvrekvrVe.saDPsLislsakLgalehllaqarrn 266
                 ++++l+l++rvLep+ + p      ++++ + + +g +rrlehde+++ f  +g+ V+v+ek++Ve saDP+L+s+ akL+ale++   a+++
  KHJ32313.1 221 SDCSLLLTIRVLEPCAQAP------TISSFFLTGIGVQRRLEHDEMDQEFLyRGKMVRVKEKCQVEsSADPCLLSCAAKLQALERSTLGALDA 307
                 *******************......9************************9899************559***************998777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2324.49
//
Query:       KHJ32314.1  [L=204]
Description: putative sco1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      5e-45  152.7   0.0    2.4e-44  150.5   0.0    1.8  1  SCO1-SenC  SCO1/SenC
     0.0077   16.1   0.0      0.065   13.2   0.0    2.2  2  AhpC-TSA   AhpC/TSA family


Domain annotation for each model (and alignments):
>> SCO1-SenC  SCO1/SenC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.5   0.0   2.7e-48   2.4e-44       1     134 []      19     171 ..      19     171 .. 0.95

  Alignments for each domain:
  == domain 1  score: 150.5 bits;  conditional E-value: 2.7e-48
   SCO1-SenC   1 ggpFelvdqdgeavteedlegkpslvffgFthCpdvCpttlanmaevldalgee.................aekvqplfiTvDPerDtpevlkeyleaf 82 
                 ggpFel++q+ge+ ++e+++g++slv+fgFthCpd+Cp +l +ma+++d ++++                   ++ p+fiT+DP+rDtp+vlkeyl++f
  KHJ32314.1  19 GGPFELLNQNGEKWSSENMKGHYSLVYFGFTHCPDICPDELDKMARMIDIVNASslfsadpgqakisrvkkLPPLLPIFITCDPARDTPAVLKEYLSEF 117
                 68**************************************************9999******99999876448899*********************** PP

   SCO1-SenC  83 dpriigltGskeeiakaakefrvyvekvedees..dytvdHsssvyLvdpdgrv 134
                 ++++igltG+ +ei++ +k++rvy+++ e  ++  dy+vdHs ++yL+dp+g++
  KHJ32314.1 118 HKNLIGLTGTWNEIRDTCKKYRVYFSTPEGVQKgqDYLVDHSIYFYLMDPEGDF 171
                 ************************99998887779****************986 PP

>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.0   7.2e-06     0.065       8      52 ..      22      66 ..      18      74 .. 0.90
   2 ?   -0.2   0.0     0.099   8.9e+02      82     116 ..     122     157 ..      95     161 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 7.2e-06
                -EEESTTCEEEECHHHTTSEEEEEEESTST-C.CHHHHHHHHHHCH CS
    AhpC-TSA  8 felknadgetvslsdykgkpvvlffypkdwcp.vCttelpalakly 52
                fel n++ge+ s +++kg++ +++f  + +cp  C++el ++a+++
  KHJ32314.1 22 FELLNQNGEKWSSENMKGHYSLVYFGFT-HCPdICPDELDKMARMI 66
                99***********************999.89857******999876 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.099
                 .SSEEEE-TTSHHHHHTT-EETT.TTECSCEEEEE- CS
    AhpC-TSA  82 lnfpllsDeegkvakaygvlkee.kglalratfvid 116
                 + ++  + e ++++k+y v+++  +g++  + +++d
  KHJ32314.1 122 IGLTGTWNEIRDTCKKYRVYFSTpEGVQKGQDYLVD 157
                 555555667788888999888776666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1591.28
//
Query:       KHJ32315.1  [L=353]
Description: putative c2h2 finger domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      268  (0.0149478); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2886.38
//
Query:       KHJ32316.1  [L=358]
Description: hypothetical protein EV44_g6033 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.9e-22   78.3   1.0      1e-21   77.5   1.0    1.4  1  DUF3712    Protein of unknown function (DUF3712)
  ------ inclusion threshold ------
      0.046   14.3   0.1      0.096   13.2   0.1    1.6  1  DUF1279    Protein of unknown function (DUF1279)
      0.066   13.4   0.1       0.12   12.5   0.1    1.3  1  GxGYxYP_N  GxGYxY sequence motif in domain of unknown functio


Domain annotation for each model (and alignments):
>> DUF3712  Protein of unknown function (DUF3712)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.5   1.0   1.7e-25     1e-21       2     125 .]     139     266 ..     138     266 .. 0.94

  Alignments for each domain:
  == domain 1  score: 77.5 bits;  conditional E-value: 1.7e-25
     DUF3712   2 pfakvplpeiki.kgnsttglvdqtlditdvd...aftkflealvlseefklsvkGkttlklgglkfkgvtldKtvtlkGlnslkgfsiedlqlllpdp 96 
                 p+ ++++p++++    + +++++  l+  + +   + +kf+++++++e +++++ G+ +++lg+l+  +v ++ ++++ Gln+l+g+s+++lql l+++
  KHJ32316.1 139 PMSTIQFPQTQAlYPVTSISIEKMVLEFKSDAwlnEVSKFTSQILSQEFVTMAIVGNGKVHLGALPEMNVHYNQSISMRGLNGLRGLSVTNLQLNLNAT 237
                 6789999999998888777779999999998888899************************************************************** PP

     DUF3712  97 edginllatvtlpNpsvvtielGnvtldl 125
                  +  n+ +++t+ Npsv+t e+Gnvt+ l
  KHJ32316.1 238 VGEPNMSGQATIFNPSVLTTEMGNVTFSL 266
                 **************************986 PP

>> DUF1279  Protein of unknown function (DUF1279)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   1.6e-05     0.096       1      37 [.      41      82 ..      41     130 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.6e-05
     DUF1279  1 qklKelfkkYGkvalgvyl.sislidlgicYllvks....gv 37
                q++++ f  Y++++l+v + ++  ++l+++Yllv s    +v
  KHJ32316.1 41 QRFRKHFSLYWWIYLAVSCiCLLNVTLTSIYLLVPSlaqrNV 82
                7999*************96256779*********99653333 PP

>> GxGYxYP_N  GxGYxY sequence motif in domain of unknown function N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1     2e-05      0.12      20      62 ..       8      50 ..       5      54 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2e-05
                STHH..HHHHHHHHHHH..---EEEESSHHHHHHHHHH---EE CS
   GxGYxYP_N 20 rdsddykkwledlkknygvtveskelkdlasllkkfkneidgy 62
                r+s++   w++  +k+y+v+v +++++ ++s++++f+++++ y
  KHJ32316.1  8 RSSSTVPLWYQTTQKKYNVQVHETVVRPPRSFIQRFRKHFSLY 50
                55556789******************************99866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.21s 00:00:00.64 Elapsed: 00:00:00.35
# Mc/sec: 3048.82
//
Query:       KHJ32317.1  [L=934]
Description: putative lipase rog1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-43  148.6   2.5    3.5e-28   98.6   0.0    3.5  3  DUF676    Putative serine esterase (DUF676)
  ------ inclusion threshold ------
      0.041   13.6   0.1       0.13   11.9   0.0    1.8  2  PGAP1     PGAP1-like protein


Domain annotation for each model (and alignments):
>> DUF676  Putative serine esterase (DUF676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.8     7e-10   6.3e-06       3      75 ..     286     364 ..     284     369 .. 0.78
   2 !   22.1   0.0     1e-08   9.1e-05      33      75 ..     371     413 ..     362     428 .. 0.77
   3 !   98.6   0.0   3.9e-32   3.5e-28      79     214 ..     457     605 ..     438     609 .. 0.90

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 7e-10
      DUF676   3 kkdhLvVlvHGlqgn.saDlelikeqleki..keklpeekieflmsenne...sktfkgidvlgerlaeevlevvkkkk 75 
                 +k hLvVl+HGl++n +aD+ ++ke + ++  + k++ + i    +e+++   +k  ++++   e+ ++e ++v+++++
  KHJ32317.1 286 SKIHLVVLTHGLHSNiGADMLYLKESIDAAiiQAKVNAREIRRQRKEQIKresEKNNNDVNQFEENKVSETCKVTQQRS 364
                 588************************9987888898888888777766511145556888888888888888877766 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 1e-08
      DUF676  33 eklpeekieflmsennesktfkgidvlgerlaeevlevvkkkk 75 
                 +  +ee ++++++++n+++t+ gi++lg+rla +vl+++  k+
  KHJ32317.1 371 SSEDEEEVVVRGFSGNVARTERGIKYLGKRLARYVLSITFPKQ 413
                 344677******************************9875544 PP

  == domain 3  score: 98.6 bits;  conditional E-value: 3.9e-32
      DUF676  79 kkiSfvghSlGgliaraaiaklkekemtlkeaikglepvtfitlasPhLGvlysskslinlglalleklkkslsmeqlgltGrdLflk........... 166
                 + iSf+ghSlGgl++++a+a+++++    ++++++++p++fi+la+P+LG+  +++s          ++k +l+++ +g+tG+dL l            
  KHJ32317.1 457 TSISFIGHSLGGLVQTYAVAYIQKH---WPSFFDQIRPINFIALATPFLGLSNENPS----------YIKFALDFGFIGRTGQDLGLSwsaptmarnsf 542
                 47******************99954...3579*************************..........******************************** PP

      DUF676 167 ..................ddkdeknsllykllkdekdlkliealklFkrrvlyanvvndrivplas 214
                                    +++ +n+ l+++l   +      alk+Fk+r++y+nvvnd+ivpl++
  KHJ32317.1 543 gaifgqrteesfkssdhdGENKPENKPLLQILPMGP---AHTALKKFKSRTVYSNVVNDGIVPLRT 605
                 ***************996556677888999999888...888999*******************99 PP

>> PGAP1  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1      0.73   6.6e+03     193     216 ..     217     242 ..     182     257 .. 0.52
   2 ?   11.9   0.0   1.5e-05      0.13      89     122 ..     455     489 ..     442     505 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 0.73
       PGAP1 193 nglsvattsi..pkvwlsidhlaivw 216
                 ++l++ t ++  +++ l++++ a++w
  KHJ32317.1 217 HELTTQTRGVfsNSIKLKVEDTAMLW 242
                 22222222221122234566666666 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 1.5e-05
       PGAP1  89 eptsviliGHSmGGivaraaltl.knyikqsvnti 122
                 + ts+  iGHS+GG+v   a+ + ++++++  ++i
  KHJ32317.1 455 HFTSISFIGHSLGGLVQTYAVAYiQKHWPSFFDQI 489
                 569*************8877655256777654443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (934 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1206  (0.0672653); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.26s 00:00:00.95 Elapsed: 00:00:00.39
# Mc/sec: 7228.52
//
Query:       KHJ32318.1  [L=159]
Description: putative chromosome segregation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.4e-05   23.5   0.4    5.4e-05   23.5   0.4    1.1  1  ATG16          Autophagy protein 16 (ATG16)
    0.00042   19.3   1.7    0.00053   19.0   1.7    1.1  1  Spc7           Spc7 kinetochore protein
    0.00081   19.5   0.8     0.0011   19.1   0.8    1.2  1  YscO-like      YscO-like protein
     0.0033   17.5   1.9     0.0045   17.0   1.9    1.1  1  Cep57_CLD      Centrosome localisation domain of Cep57
     0.0065   16.9   2.7     0.0077   16.7   1.9    1.5  1  Spectrin       Spectrin repeat
     0.0076   16.8   0.2     0.0093   16.5   0.2    1.1  1  APG6_N         Apg6 coiled-coil region
     0.0098   15.9   3.3      0.012   15.6   3.3    1.1  1  JAKMIP_CC3     JAKMIP CC3 domain
  ------ inclusion threshold ------
       0.01   15.8   1.7      0.019   14.9   1.7    1.5  1  Noelin-1       Neurogenesis glycoprotein
      0.014   14.5   2.8      0.017   14.2   2.8    1.1  1  Atg14          Vacuolar sorting 38 and autophagy-related subu
      0.016   14.8   5.5      0.022   14.4   5.5    1.1  1  DUF2968        Protein of unknown function (DUF2968)
      0.028   14.8   3.0      0.039   14.4   3.0    1.3  1  CENP-H         Centromere protein H (CENP-H)
      0.047   13.8   0.8      0.068   13.2   0.8    1.4  1  COG2           COG (conserved oligomeric Golgi) complex compo
      0.048   13.4   4.1      0.058   13.1   4.1    1.1  1  DUF4201        Domain of unknown function (DUF4201)
      0.059   13.8   1.4       0.57   10.6   0.1    2.6  2  FlaC_arch      Flagella accessory protein C (FlaC)
      0.075   13.6   1.3       0.13   12.8   1.3    1.4  1  MerR-DNA-bind  MerR, DNA binding
       0.08   12.5   9.6       0.17   11.4   9.3    1.6  1  MscS_porin     Mechanosensitive ion channel porin domain
        0.1   12.3   3.9       0.14   11.8   3.9    1.2  1  DUF745         Protein of unknown function (DUF745)
       0.13   12.7   2.4       0.68   10.4   2.3    2.0  1  DUF16          Protein of unknown function DUF16
       0.19   12.1   8.7        3.3    8.1   0.9    2.3  2  Csm1_N         Csm1 N-terminal domain
        0.2   12.0   1.9       0.33   11.2   1.9    1.3  1  DUF948         Bacterial protein of unknown function (DUF948)
       0.22   12.2   6.1       0.38   11.4   5.0    1.9  2  SlyX           SlyX
       0.32   11.5   4.6        5.9    7.4   4.5    2.6  1  NPV_P10        Nucleopolyhedrovirus P10 protein
       0.58   10.2   4.0        1.4    9.0   3.9    1.6  2  DUF1664        Protein of unknown function (DUF1664)
        5.9    7.4   8.9        4.3    7.8   1.6    3.4  3  LPP            Lipoprotein leucine-zipper


Domain annotation for each model (and alignments):
>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.4   7.2e-08   5.4e-05      78     141 ..      74     137 ..       7     145 .. 0.92

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 7.2e-08
       ATG16  78 sleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkd 141
                    +k+++l+++l +++++ +e  + l  + +e+++l+++++++++++++  +++++l+ +l++
  KHJ32318.1  74 LKGKKVSKLNSDLGAAQRQVEEIRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQ 137
                 55689******************************************************99986 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   1.7   7.1e-07   0.00053     168     246 ..      57     138 ..      47     149 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 7.1e-07
        Spc7 168 llpeleeekaeleeeleklqeaaeeles...idkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqksel 246
                 ll  +++++  l+++le   +++ +l+s     + ++ee+r +l+ +++ei+ +++ ++++++q+e+  ++i++l+++ s++
  KHJ32318.1  57 LLLCFDSKFGVLKSQLELKGKKVSKLNSdlgAAQRQVEEIRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQV 138
                 5566778899999999999999999999887889**************************************9999999886 PP

>> YscO-like  YscO-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.8   1.4e-06    0.0011      81     145 ..      67     131 ..      62     150 .. 0.92

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1.4e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   YscO-like  81 vvkeelkqeekkvekQkekVkvAerkvEqareelakkrkeveklekhkeewlkevkkeeekreel 145
                 v+k +l+ + kkv k +    +A+r+vE+ r+ l ++++e+  l++  ++ ++++ +  +++++l
  KHJ32318.1  67 VLKSQLELKGKKVSKLNSDLGAAQRQVEEIRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNL 131
                 7999******************************************9999999998887777665 PP

>> Cep57_CLD  Centrosome localisation domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   1.9   6.1e-06    0.0045      62     151 ..      68     157 ..      62     158 .. 0.95

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 6.1e-06
   Cep57_CLD  62 lesqLaaaesrcslLEkqLeymrkmvesaekerkavlekqaslekekkqesselqaklekLekLEkeylrLtatqklaekkikeLeekLk 151
                 l+sqL+   ++ s+L   L   ++ ve+ ++  ++++++ a l++  +q++++++a+l+++++L ++ +++   +++ ++ki+ L+ k++
  KHJ32318.1  68 LKSQLELKGKKVSKLNSDLGAAQRQVEEIRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDKISFLNDKIS 157
                 7899999999****************************************************************************9985 PP

>> Spectrin  Spectrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   1.9     1e-05    0.0077      36      99 ..      72     142 ..      63     145 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 1e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHHH.HHTTHTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Spectrin  36 vqallkkhkaleaelaaqqervkaln......elaekl.ldeghsaseeieerleelnerWeeLkelaaer 99 
                 ++ + kk   l  +l a+q++v+++       +++ ++  +   +++++ie+rl+++n+    L++ + +r
  KHJ32318.1  72 LELKGKKVSKLNSDLGAAQRQVEEIRtalshaHQEIAVlNQTTNQKTQQIEARLNDINNLNSRLSQVILDR 142
                 45555699*********************976444444366669999*************99999998887 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.2   1.2e-05    0.0093      45     115 ..      68     138 ..      36     154 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.2e-05
      APG6_N  45 qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynelqlellel 115
                  +++le   ++++kl+++  +++++ +e+ ++ +   +e+a l ++++++ ++ e+ +++ n+l+  l++ 
  KHJ32318.1  68 LKSQLELKGKKVSKLNSDLGAAQRQVEEIRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQV 138
                 56677777889999***************************************999999999999988876 PP

>> JAKMIP_CC3  JAKMIP CC3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   3.3   1.6e-05     0.012     104     180 ..      73     147 ..      62     159 .] 0.84

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.6e-05
  JAKMIP_CC3 104 erelkareqleselrktkskikdLeeaLaqkGqdskwveekQalikrnqeLvekikkleeeeskLkqeiqdlrdqne 180
                 e + k+  +l+s+l  ++ +++++ +aL++  q+   +++  +  ++ q++  +++ +++ +s+L q i d    n+
  KHJ32318.1  73 ELKGKKVSKLNSDLGAAQRQVEEIRTALSHAHQEIAVLNQ--TTNQKTQQIEARLNDINNLNSRLSQVILDRSTDND 147
                 667888899**************************99998..458999***99**************9988776665 PP

>> Noelin-1  Neurogenesis glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   1.7   2.6e-05     0.019      37      96 ..      89     148 ..      76     151 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.6e-05
    Noelin-1  37 rsrqlrqllekvqnlsqsievldlRtsrdlqyvrktetllktlesklkvveedrkelsak 96 
                  +rq+ ++        q+i vl++ t++  q ++   + +++l+s+l++v  dr + ++k
  KHJ32318.1  89 AQRQVEEIRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDK 148
                 5789999999999999*********************************99988877665 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   2.8   2.3e-05     0.017      19     101 ..      70     153 ..      51     159 .] 0.59

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.3e-05
       Atg14  19 ngperlyelrerlaklksekeslkkkiekalegke....eaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekk 101
                 +   +l+ + +++ kl+s+  + ++++e++ +  +    e   l++   +k++++e   ++i  l++rl+++  ++s+ +++i    
  KHJ32318.1  70 S---QLELKGKKVSKLNSDLGAAQRQVEEIRTALShahqEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDKISFLN 153
                 3...66666677777777777777766644444333334444455555555566666666666666666666666666666665555 PP

>> DUF2968  Protein of unknown function (DUF2968)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   5.5   2.9e-05     0.022     111     177 ..      68     134 ..      62     137 .. 0.93

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.9e-05
     DUF2968 111 lerqiaasearaerLqadlavarqQeqavaerQkqarkeaaaLeaqreaaqaqlralqrqirqLqaq 177
                 l+ q++ + +++++L++dl  a+ Q +++ +  ++a++e a+L++  ++  +q++a  + i++L+  
  KHJ32318.1  68 LKSQLELKGKKVSKLNSDLGAAQRQVEEIRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSR 134
                 6778999999*****************************************************9976 PP

>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   3.0   5.2e-05     0.039       7      56 ..      78     128 ..      72     157 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5.2e-05
      CENP-H   7 qrdelssellklsqelrelqeeltevekenlrlkrknrelaael.lelake 56 
                 +  +l+s+l + +++++e++ +l+++ +e+  l+++++++++++ ++l+  
  KHJ32318.1  78 KVSKLNSDLGAAQRQVEEIRTALSHAHQEIAVLNQTTNQKTQQIeARLNDI 128
                 667899**************************************4466543 PP

>> COG2  COG (conserved oligomeric Golgi) complex component, COG2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.8   9.2e-05     0.068      71     125 ..      79     131 ..      63     152 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 9.2e-05
        COG2  71 leevesplaaarkkvesvreklsereeeveskleeakeleekrellklllkldev 125
                 +++++s+l aa+++ve++r +ls++++e+     +++  ++++++  +l +++++
  KHJ32318.1  79 VSKLNSDLGAAQRQVEEIRTALSHAHQEIAV--LNQTTNQKTQQIEARLNDINNL 131
                 5555666666666666666666666665542..2333333333333333333333 PP

>> DUF4201  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   4.1   7.7e-05     0.058      47     132 ..      68     153 ..      62     159 .] 0.87

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 7.7e-05
     DUF4201  47 lqienqalnkkIeernkeLkrlkkkttktvhalthlkeklhmleselselkkelkekeerlaklrkelykvklerdklrkqneklk 132
                 l+ + +   kk+   n +L + ++++     al+h ++    l+++ +++ ++++ + ++++ l  +l++v l+r+   ++ + l+
  KHJ32318.1  68 LKSQLELKGKKVSKLNSDLGAAQRQVEEIRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDKISFLN 153
                 5555666678999999***********************************************************98888776665 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00076      0.57       7      37 ..      77     107 ..      71     116 .. 0.85
   2 ?    1.8   0.2      0.43   3.2e+02       7      19 ..     126     138 ..     112     159 .] 0.52

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00076
   FlaC_arch   7 nklsklsteletvkkeneelsksveelkenV 37 
                 +k+skl + l+ ++++ ee+++ +    +++
  KHJ32318.1  77 KKVSKLNSDLGAAQRQVEEIRTALSHAHQEI 107
                 689999*************999887766665 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.43
   FlaC_arch   7 nklsklsteletv 19 
                 n++++l ++l+ v
  KHJ32318.1 126 NDINNLNSRLSQV 138
                 2333333344444 PP

>> MerR-DNA-bind  MerR, DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.3   0.00018      0.13      17      64 ..      93     137 ..      91     138 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00018
                    HHHHHHHHHHHHSTTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  MerR-DNA-bind  17 LdeIrelLalyddrappcqdvrallarklaeleeriaeLqalraeLaa 64 
                    ++eIr+ L+     +++ + +++ + +k +++e+r++++  l  +L +
     KHJ32318.1  93 VEEIRTALSH---AHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQ 137
                    69******55...677777777*********************99986 PP

>> MscS_porin  Mechanosensitive ion channel porin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   9.3   0.00023      0.17      83     139 ..      68     128 ..      63     142 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00023
  MscS_porin  83 Leqrllqtssqlqelqeqlaqlnsqlvelqtrperaqqqlt....earqrlqeirnrLnst 139
                 L ++l+    ++++l+++l  ++ q+ e++t+++ a+q+++    + +q++q+i++rLn+ 
  KHJ32318.1  68 LKSQLELKGKKVSKLNSDLGAAQRQVEEIRTALSHAHQEIAvlnqTTNQKTQQIEARLNDI 128
                 6777888888888888899999999999999999999988722224456677777777554 PP

>> DUF745  Protein of unknown function (DUF745)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   3.9   0.00019      0.14      57     122 ..      74     137 ..      69     146 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00019
      DUF745  57 LaGKqqlveqleqelreaeavvqeekkslqsseanakaaakaakqaqqqlealkallkaakenlen 122
                 L+GK+  v +l+++l  a+++v+e+ ++l+++++ +++ +++ +q +qq+ea  + +++ +++l++
  KHJ32318.1  74 LKGKK--VSKLNSDLGAAQRQVEEIRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQ 137
                 55665..78999999999999999999999999999999999999999999877777777777665 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.3   0.00091      0.68      41     100 ..      70     126 ..      25     154 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00091
                 HHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH...........HHHHHHHHHHHHHHHHH CS
       DUF16  41 akvdklgeqinkleqkvekqgekikelkveqkaqgeeln....kvdetleliletLqkinkRlD 100
                  +++ +g++++kl+    + + +++e++      ++e+     +     +   +  q+i+ Rl 
  KHJ32318.1  70 SQLELKGKKVSKLNSDLGAAQRQVEEIRTALSHAHQEIAvlnqT----TN---QKTQQIEARLN 126
                 44445566666666666666666666666665555555533332....22...22222222222 PP

>> Csm1_N  Csm1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.9    0.0045       3.3      31      64 ..      67     100 ..      66     106 .. 0.89
   2 ?    8.1   2.3    0.0045       3.4      27      60 ..     105     138 ..      98     148 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0045
      Csm1_N  31 vLsqkletkdqeiesLkeqlaeleekvkeleerr 64 
                 vL+ +le k +++++L   l +++ +v+e+ +  
  KHJ32318.1  67 VLKSQLELKGKKVSKLNSDLGAAQRQVEEIRTAL 100
                 799*************************998765 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0045
      Csm1_N  27 hENsvLsqkletkdqeiesLkeqlaeleekvkel 60 
                 +E  vL+q++++k+q+ie+  + +++l++++++ 
  KHJ32318.1 105 QEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQV 138
                 67889***********************999885 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.9   0.00045      0.33      22      76 ..      80     134 ..      72     139 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00045
      DUF948  22 lklkktldeaaatieelekqvdpilkevedllakvnelledvneklekvdpltea 76 
                  kl++ l +a++++ee++  +    +e++ l +++n+ +++++ +l+++++l + 
  KHJ32318.1  80 SKLNSDLGAAQRQVEEIRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSR 134
                 5677778888999999999999999999999999999888888888888877554 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1         2   1.5e+03      38      59 ..      70      91 ..      66      95 .. 0.51
   2 ?   11.4   5.0   0.00051      0.38       3      50 ..      91     138 ..      89     150 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 2
                HHHHHHHHT-XXXXXXXXXXXX CS
        SlyX 38 rqlrllaerlkeleessgasea 59
                 ql+l  +++++l+++ ga+++
  KHJ32318.1 70 SQLELKGKKVSKLNSDLGAAQR 91
                5555555555555555554443 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00051
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXX CS
        SlyX   3 erleeLEiklafqedtieeLndvvaeqqqqidrlqrqlrllaerlkel 50 
                  ++ee+ + l++  + i  Ln++  +  qqi++    ++ l+ rl+++
  KHJ32318.1  91 RQVEEIRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQV 138
                 67999***************************************9765 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   4.5     0.008       5.9      13      65 ..      79     135 ..      61     158 .. 0.64

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.008
     NPV_P10  13 ikavddkVdalqqqvddvqenl....pdvtelnekLdaqsaqLaeletkvenIqdiL 65 
                 ++++++ + a q qv+++++ l    +++  ln+  ++ ++q+++  + ++n ++ L
  KHJ32318.1  79 VSKLNSDLGAAQRQVEEIRTALshahQEIAVLNQTTNQKTQQIEARLNDINNLNSRL 135
                 566666677777777555544411114455555555555555554444444444444 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.3     0.009       6.7      83     121 ..      73     111 ..      48     116 .. 0.55
   2 ?    9.0   3.9    0.0019       1.4      54     120 ..      93     159 .]      73     159 .] 0.79

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.009
     DUF1664  83 keikeevtevredlseigedvesvkeaveglesklerie 121
                 +   ++v+++++dl + +++ve++++a ++  ++++ ++
  KHJ32318.1  73 ELKGKKVSKLNSDLGAAQRQVEEIRTALSHAHQEIAVLN 111
                 333444555555555555555555555544444444433 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0019
     DUF1664  54 seslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskleri 120
                  e+++++  h  ++i+ ++++ ++ ++ +++  ++++++++ ls++  d ++ ++ ++ l+ k++++
  KHJ32318.1  93 VEEIRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDKISFLNDKISSL 159
                 3567777777789999999999999999999999999999999999999999999999999999875 PP

>> LPP  Lipoprotein leucine-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       7.3   5.5e+03      16      26 ..       6      16 ..       3      25 .. 0.57
   2 ?    7.8   1.6    0.0058       4.3       8      36 ..      78     106 ..      68     130 .. 0.77
   3 ?    2.1   0.7      0.36   2.7e+02       7      22 ..     126     141 ..     117     159 .] 0.70

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 7.3
         LPP 16 vdqlssdvnsa 26
                ++qls+  +++
  KHJ32318.1  6 QSQLSAAFQQS 16
                55666665554 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0058
         LPP   8 qVsqLkskvdqlssdvnsakaaaqaakeE 36 
                  Vs+L+s+  + + +v+++++a+  a +E
  KHJ32318.1  78 KVSKLNSDLGAAQRQVEEIRTALSHAHQE 106
                 46666666666666677777777777776 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.36
         LPP   7 sqVsqLkskvdqlssd 22 
                 +++++L+s  +q+  d
  KHJ32318.1 126 NDINNLNSRLSQVILD 141
                 6788888877777544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1922  (0.107201); expected 358.6 (0.02)
Passed bias filter:                     1022  (0.0570026); expected 358.6 (0.02)
Passed Vit filter:                       211  (0.0117686); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.37
# Mc/sec: 1296.53
//
Query:       KHJ32319.1  [L=561]
Description: hypothetical protein EV44_g6096 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.5e-05   22.5   4.2    9.4e-05   21.4   4.2    1.4  1  Spc7            Spc7 kinetochore protein
    0.00031   21.1   1.0    0.00031   21.1   1.0    2.1  1  zf-C4H2         Zinc finger-containing protein
  ------ inclusion threshold ------
       0.01   16.3   7.7       0.01   16.3   7.7    1.5  1  Fez1            Fez1
      0.012   14.7   6.1      0.025   13.7   6.1    1.4  1  Atg14           Vacuolar sorting 38 and autophagy-related sub
      0.015   15.5  13.2      0.016   15.4  10.9    2.1  2  ATG16           Autophagy protein 16 (ATG16)
      0.019   15.0   3.6      0.057   13.4   3.6    1.8  1  Cep57_CLD       Centrosome localisation domain of Cep57
       0.02   15.4   2.1        0.1   13.1   2.1    2.3  1  Spectrin        Spectrin repeat
      0.032   12.5   9.1     0.0076   14.6   5.9    1.5  2  Cast            RIM-binding protein of the cytomatrix active 
      0.033   12.8   0.3      0.055   12.1   0.3    1.3  1  DUF3138         Protein of unknown function (DUF3138)
      0.042   13.9   0.3      0.091   12.9   0.3    1.6  1  zf-CCHC         Zinc knuckle
      0.046   13.7   2.0       0.14   12.2   2.0    1.8  1  Noelin-1        Neurogenesis glycoprotein
      0.054   13.9   1.7        6.1    7.3   0.0    3.4  3  FlaC_arch       Flagella accessory protein C (FlaC)
      0.059   13.8   8.1        1.1    9.7   0.4    3.9  3  LPP             Lipoprotein leucine-zipper
      0.066   13.2   6.6      0.097   12.6   5.7    1.7  1  JAKMIP_CC3      JAKMIP CC3 domain
      0.083   12.5   5.0       0.23   11.0   5.0    1.7  1  Filament        Intermediate filament protein
       0.18   11.8   5.9        5.1    7.1   3.6    2.6  2  CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein C
       0.19   12.0   5.6        1.6    8.9   0.7    2.6  2  TMF_TATA_bd     TATA element modulatory factor 1 TATA binding
       0.22   10.5   6.4        0.1   11.5   3.9    1.7  2  IFT57           Intra-flagellar transport protein 57
       0.22   11.1   7.8       0.43   10.2   5.8    2.3  2  DUF2968         Protein of unknown function (DUF2968)
       0.26   11.6   3.3       0.74   10.2   3.3    1.8  1  HrpB7           Bacterial type III secretion protein (HrpB7)
       0.28   11.7  11.3        2.5    8.6   0.2    3.8  3  NPV_P10         Nucleopolyhedrovirus P10 protein
       0.28   11.0   8.2       0.78    9.5   8.2    1.7  1  KASH_CCD        Coiled-coil region of CCDC155 or KASH
       0.34    9.5   8.3      0.083   11.5   3.3    1.9  2  AAA_13          AAA domain
       0.37   10.1   8.4       0.62    9.4   7.6    1.7  1  GAS             Growth-arrest specific micro-tubule binding
       0.48   10.6   7.3        8.8    6.5   3.6    2.6  2  Tropomyosin_1   Tropomyosin like
       0.49   10.4   9.0      0.031   14.3   2.0    2.3  2  YscO-like       YscO-like protein
       0.78   10.2   9.1          1    9.8   7.7    2.0  2  CENP-H          Centromere protein H (CENP-H)
        1.3    7.0  10.7        3.1    5.8   3.9    2.1  2  HOOK            HOOK protein
        1.6    9.3   8.2         15    6.2   5.4    3.1  1  Syntaxin-6_N    Syntaxin 6, N-terminal
        1.9    9.0   9.8        7.4    7.1   3.3    3.0  3  DUF16           Protein of unknown function DUF16
        3.5    7.7   8.4        5.1    7.2   4.7    1.9  1  UPF0242         Uncharacterised protein family (UPF0242) N-te
        3.6    8.1  10.4       0.82   10.2   5.3    2.4  2  APG6_N          Apg6 coiled-coil region
        5.1    7.6  11.6        5.8    7.4   0.1    3.3  2  ZapB            Cell division protein ZapB
        6.4    7.5  17.9         10    6.9   8.6    4.5  4  FliD_N          Flagellar hook-associated protein 2 N-terminu
        6.6    7.1  12.4        6.6    7.1   4.5    3.8  4  BLOC1_2         Biogenesis of lysosome-related organelles com
        7.4    6.9   6.7        2.6    8.3   1.7    2.3  2  DUF948          Bacterial protein of unknown function (DUF948
        7.8    6.5   7.1        4.4    7.4   4.3    2.1  1  DUF1664         Protein of unknown function (DUF1664)


Domain annotation for each model (and alignments):
>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   4.2   1.9e-07   9.4e-05     168     292 ..      57     180 ..      48     185 .. 0.83

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 1.9e-07
        Spc7 168 llpeleeekaeleeeleklqeaaeeles...idkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgw 263
                 ll  +++++  l+++le   +++ +l+s     + ++eelr +l+ +++ei+ +++ ++++++q+e+  ++i++l+++ s++  + +    + + + ++
  KHJ32319.1  57 LLLCFDSKFGVLKSQLELKGKKVSKLNSdlgAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRS----TDNDKISF 151
                 555677888999999999999999999988788*******************99999999999999888888888888877766655....44455679 PP

        Spc7 264 sesevsrlkeevkaleeltgwkivslsgs 292
                  ++ +s+l++ev++l+ +++ k +s s++
  KHJ32319.1 152 LNDKISSLQSEVNTLQATSNAKGISTSKT 180
                 9999************9999998887765 PP

>> zf-C4H2  Zinc finger-containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   1.0   6.3e-07   0.00031       8     118 ..      75     185 ..      70     268 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 6.3e-07
     zf-C4H2   8 ktleleklknklakevealekeekcleeykkelelLeqEkmaHveeLrlIhaDinalEsvikeaeeekekslekakklyeeykklkeevnelrselgle 106
                 k ++++kl++ l ++  ++e+ +  l++ ++e+  L+q  ++  +++    +Din+l s + +   +++   +k++ l ++++ l++evn+l+  ++ +
  KHJ32319.1  75 KGKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDKISFLNDKISSLQSEVNTLQATSNAK 173
                 6678999999**********************************************************************************9998888 PP

     zf-C4H2 107 kledleeeeeel 118
                  +++ ++++  +
  KHJ32319.1 174 GISTSKTTDVAT 185
                 777744444333 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   16.3   7.7   2.1e-05      0.01      14     141 ..      67     209 ..      64     225 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.1e-05
        Fez1  14 lLKqQLkdsqaevtqklseivalkaqlrelrakleekeeeikeleesleektlelevcenelqrk..............kseaellrekvekleeelke 98 
                 +LK+QL    + v++  s++ a + q+ elr++l++  +ei  l++++++kt+++e   n++++               +++ + l++k+++l++e++ 
  KHJ32319.1  67 VLKSQLELKGKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLnsrlsqvildrstdNDKISFLNDKISSLQSEVNT 165
                 69****999999999999999*********************************998888888777888999999999889999999999999999999 PP

        Fez1  99 lreelselsleeeeaa...............lesdeakaqrqeaeeleelkreverlr 141
                 l+ + +++  ++++++               +               +  ++++e+ +
  KHJ32319.1 166 LQATSNAKGISTSKTTdvatpiprrtrsdpeK--------------FSGAQKDTEKRQ 209
                 99987777666666555555555554444441..............333333333322 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   6.1   5.1e-05     0.025      18     128 ..      69     178 ..      52     224 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 5.1e-05
       Atg14  18 rngperlyelrerlaklksekeslkkkiekalegke....eaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklk 112
                 ++   +l+ + +++ kl+s+  + ++++e++ +  +    e   l++   +k++++e   ++i  l++rl+++  ++s+ +++i     k+++l++++ 
  KHJ32319.1  69 KS---QLELKGKKVSKLNSDLGAAQRQVEELRTALShahqEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDKISFLNDKISSLQSEVN 164
                 44...9999999999999999999999997655555444666667888888899999999999999999999999999999999999999999999998 PP

       Atg14 113 kRrsdleslqneleer 128
                 + +++  s  + ++ +
  KHJ32319.1 165 TLQAT--SNAKGISTS 178
                 55444..433333333 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4  10.9   3.4e-05     0.016      80     173 ..      76     169 ..      66     173 .. 0.85
   2 ?    2.8   0.3      0.25   1.2e+02      27     155 ..     152     207 ..     146     222 .. 0.43

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 3.4e-05
       ATG16  80 eqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnqaEek 173
                  +k+++l+++l +++++ +el + l  + +e+++l+++++++++++++  +++++l+ +l++        +  +  l D +s+Lq ++n + ++
  KHJ32319.1  76 GKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDKISFLNDKISSLQSEVNTLQAT 169
                 5799*****************************************************9999987777777777777777777777777776655 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.25
       ATG16  27 Lldrtsaleaenaklekaaasakssksskksakekeasasqsnskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerl 125
                 L d++s+l++e  +l                                                                         +++++++  + 
  KHJ32319.1 152 LNDKISSLQSEVNTL-------------------------------------------------------------------------QATSNAKGIST 177
                 445555555555555.........................................................................33333333333 PP

       ATG16 126 aeleaeraaletklkdreeelrekeklvqd 155
                  + ++  + + ++ ++  e++ + +k  ++
  KHJ32319.1 178 SKTTDVATPIPRRTRSDPEKFSGAQKDTEK 207
                 333333333333333333333333333333 PP

>> Cep57_CLD  Centrosome localisation domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   3.6   0.00012     0.057      62     161 ..      68     167 ..      62     179 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 0.00012
   Cep57_CLD  62 lesqLaaaesrcslLEkqLeymrkmvesaekerkavlekqaslekekkqesselqaklekLekLEkeylrLtatqklaekkikeLeekLkeEehqrklv 160
                 l+sqL+   ++ s+L   L   ++ ve+ ++  ++++++ a l++  +q++++++a+l+++++L ++ +++   +++ ++ki+ L+ k++  + +   +
  KHJ32319.1  68 LKSQLELKGKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDKISFLNDKISSLQSEVNTL 166
                 7889999999****************************99****999*****************************************98877666665 PP

   Cep57_CLD 161 q 161
                 q
  KHJ32319.1 167 Q 167
                 5 PP

>> Spectrin  Spectrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   2.1   0.00021       0.1      36      99 ..      72     142 ..      63     145 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00021
                 HHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHHH.HHTTHTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Spectrin  36 vqallkkhkaleaelaaqqervkaln......elaekl.ldeghsaseeieerleelnerWeeLkelaaer 99 
                 ++ + kk   l  +l a+q++v++l       +++ ++  +   +++++ie+rl+++n+    L++ + +r
  KHJ32319.1  72 LELKGKKVSKLNSDLGAAQRQVEELRtalshaHQEIAVlNQTTNQKTQQIEARLNDINNLNSRLSQVILDR 142
                 455556999******************9*976444444366669999*************99999998877 PP

>> Cast  RIM-binding protein of the cytomatrix active zone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   5.9   1.6e-05    0.0076     287     391 ..      68     172 ..      48     177 .. 0.89
   2 ?   -2.9   0.1         3   1.5e+03     479     502 ..     325     348 ..     313     382 .. 0.67

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.6e-05
        Cast 287 mktkidqlkqelskkesellalqtkLetLtnqnsDckqHievLkesltAkeqRAaiLqtevdalrlrleekeqlLnkkt..kqlqdlteekstlageir 383
                 +k++++   + +sk +s+l a q ++e L    s ++q i vL    + k q       ++++l+ rl   + +L++ t  ++++ l+++ s+l++e++
  KHJ32319.1  68 LKSQLELKGKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLS--QVILDRSTdnDKISFLNDKISSLQSEVN 164
                 78888888899*********************************************99**********7..577877662268**************** PP

        Cast 384 dlkdmldv 391
                  l+ + + 
  KHJ32319.1 165 TLQATSNA 172
                 *9988665 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3
        Cast 479 elkeklsalqaeltekesslldlk 502
                 + + k+++l+++l++k +s++d +
  KHJ32319.1 325 DNRSKVDLLRKRLNKKITSVIDNQ 348
                 456677777777777777777665 PP

>> DUF3138  Protein of unknown function (DUF3138)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.3   0.00011     0.055      22     111 ..      74     177 ..      52     201 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00011
     DUF3138  22 atadrikalkaqltalqrqvkelraalaaak.......aaaGgkissqkaaaaaaaa............aeaaaalteddvaqlkeqianaelkvdalq 101
                  + +++ +l++ l a qrqv+elr+al  a+              ++qk+    a                   +  +d+++ l+++i+  +  v++lq
  KHJ32319.1  74 LKGKKVSKLNSDLGAAQRQVEELRTALSHAHqeiavlnQ-----TTNQKTQQIEARLndinnlnsrlsqVILDRSTDNDKISFLNDKISSLQSEVNTLQ 167
                 5688999********************999944433321.....3333333333332555666654433333344568888999999999999999999 PP

     DUF3138 102 eaattGpiaG 111
                  +++   i+ 
  KHJ32319.1 168 ATSNAKGIST 177
                 9998877665 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.3   0.00019     0.091       3      15 ..     428     440 ..     426     440 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00019
                 TSSSSSSSSTTTT CS
     zf-CCHC   3 CynCGepGHiard 15 
                 C  CGe GHia+d
  KHJ32319.1 428 CVACGEKGHIAKD 440
                 667*********9 PP

>> Noelin-1  Neurogenesis glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.0   0.00028      0.14      37      96 ..      89     148 ..      82     152 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00028
    Noelin-1  37 rsrqlrqllekvqnlsqsievldlRtsrdlqyvrktetllktlesklkvveedrkelsak 96 
                  +rq+ +l        q+i vl++ t++  q ++   + +++l+s+l++v  dr + ++k
  KHJ32319.1  89 AQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDK 148
                 578999999999999**********************************99988877665 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0     0.013       6.1       7      37 ..      77     107 ..      76     114 .. 0.83
   2 ?   -1.2   0.0       5.8   2.8e+03       9      27 ..     118     136 ..     112     141 .. 0.54
   3 ?    3.5   0.0      0.19        94       1      22 [.     148     169 ..     148     177 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.013
   FlaC_arch   7 nklsklsteletvkkeneelsksveelkenV 37 
                 +k+skl + l+ ++++ eel++ +    +++
  KHJ32319.1  77 KKVSKLNSDLGAAQRQVEELRTALSHAHQEI 107
                 6899999999999999999999887666655 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 5.8
   FlaC_arch   9 lsklsteletvkkeneels 27 
                  ++++ +l+ + + n+ ls
  KHJ32319.1 118 TQQIEARLNDINNLNSRLS 136
                 4445555555555555444 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.19
   FlaC_arch   1 ridelEnklsklsteletvkke 22 
                 +i  l  k+s+l++e++t++++
  KHJ32319.1 148 KISFLNDKISSLQSEVNTLQAT 169
                 56678999**********9986 PP

>> LPP  Lipoprotein leucine-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.3     0.035        17       8      36 ..      78     106 ..      71     118 .. 0.67
   2 ?   -0.2   0.1       2.7   1.3e+03       7      20 ..     126     139 ..     117     150 .. 0.78
   3 ?    9.7   0.4    0.0023       1.1       8      31 ..     148     171 ..     144     174 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.035
         LPP   8 qVsqLkskvdqlssdvnsakaaaqaakeE 36 
                  Vs+L+s+  + + +v+++++a+  a +E
  KHJ32319.1  78 KVSKLNSDLGAAQRQVEELRTALSHAHQE 106
                 45555555555555566666666666665 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 2.7
         LPP   7 sqVsqLkskvdqls 20 
                 +++++L+s  +q+ 
  KHJ32319.1 126 NDINNLNSRLSQVI 139
                 79999999999875 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.0023
         LPP   8 qVsqLkskvdqlssdvnsakaaaq 31 
                  +s L++k+++l+s+vn ++a ++
  KHJ32319.1 148 KISFLNDKISSLQSEVNTLQATSN 171
                 6899*************9998765 PP

>> JAKMIP_CC3  JAKMIP CC3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   5.7    0.0002     0.097     104     182 ..      73     149 ..      63     165 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.0002
  JAKMIP_CC3 104 erelkareqleselrktkskikdLeeaLaqkGqdskwveekQalikrnqeLvekikkleeeeskLkqeiqdlrdqnelL 182
                 e + k+  +l+s+l  ++ ++++L +aL++  q+   +++  +  ++ q++  +++ +++ +s+L q i d    n+ +
  KHJ32319.1  73 ELKGKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQ--TTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDKI 149
                 567788899**************************99998..458999***99*************9998877666533 PP

>> Filament  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   5.0   0.00046      0.23      59     150 ..      68     169 ..      50     222 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00046
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    Filament  59 lrkqldeltkerarlqleldnlreeledlrkkyeke..............lnkreevEaelkalrkdldeatlarvdLekkvesLkeelaflkkvheeE 143
                 l++ql+   k+ ++l+ +l+ ++ ++e+lr+ +++               +++ e+  +++++l+  l +  l r+  + k+  L++ ++ l+     E
  KHJ32319.1  68 LKSQLELKGKKVSKLNSDLGAAQRQVEELRTALSHAhqeiavlnqttnqkTQQIEARLNDINNLNSRLSQVILDRSTDNDKISFLNDKISSLQ----SE 162
                 445555555555555555555555555555544444444555554431114444444466677777888888888877777777777777664....45 PP

                 XXXXXXX CS
    Filament 144 vkelqkq 150
                 v++lq++
  KHJ32319.1 163 VNTLQAT 169
                 5555555 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   3.6      0.01       5.1      80     128 ..      77     125 ..      62     138 .. 0.51
   2 ?    5.8   0.2     0.028        13      25      73 ..     120     168 ..     118     173 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.01
  CENP-F_leu_zip  80 sekeeLekelqkkqervseLeslnsslenlleekEqekvqmkeeskaav 128
                     +   +L+ +l   q++v+eL ++ s  ++ +  + q   q  ++ +a++
      KHJ32319.1  77 KKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARL 125
                     3334555555555555555555555555555555555444444444433 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.028
  CENP-F_leu_zip  25 kvenLerelemseenqekvileaEtskaevetlkeeieelaeelrelel 73 
                     ++e+   +++++++ +++vil+  t   +++ l+++i  l++e + l++
      KHJ32319.1 120 QIEARLNDINNLNSRLSQVILDRSTDNDKISFLNDKISSLQSEVNTLQA 168
                     5666667888899999999999999999999999999999999999986 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   2.9     0.018       8.6      19      80 ..      77     135 ..      68     138 .. 0.68
   2 ?    8.9   0.7    0.0034       1.6      29      79 ..     119     169 ..     115     173 .. 0.92

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.018
  TMF_TATA_bd  19 seirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqery 80 
                  +++ +l ++l ++++++e+l +  + a +ei+ l +   +++++ +++e   + +++l++r+
   KHJ32319.1  77 KKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQ---TTNQKTQQIEARLNDINNLNSRL 135
                  567888899999999999999999999999988863...33444444444445555555554 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0034
  TMF_TATA_bd  29 aslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqer 79 
                  ++++ +l+ +++  +++++ i++ +++n++ + l++++++l++e++ lq  
   KHJ32319.1 119 QQIEARLNDINNLNSRLSQVILDRSTDNDKISFLNDKISSLQSEVNTLQAT 169
                  788899999**************************************9975 PP

>> IFT57  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   3.9   0.00021       0.1     251     351 ..      69     166 ..      51     181 .. 0.77
   2 ?   -3.1   0.0       6.1   2.9e+03     221     255 ..     270     306 ..     258     310 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00021
       IFT57 251 hedisktlekiesrEkyl...nsqleellqeyreaqeelsevkekykqlsegvseltrelaeiseelekvkqemeergssmtDgsplvkikkaltklkk 346
                 +++++   +k+++  + l   ++q+eel + +++a++e++ +++  +q +++++++ ++ ++++ +l++v     +   + tD++ +  + + +++l++
  KHJ32319.1  69 KSQLELKGKKVSKLNSDLgaaQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVI---LD---RSTDNDKISFLNDKISSLQS 161
                 55555555555555555555478999999999999999999999999999999998887777777776664...44...47999999999999999999 PP

       IFT57 347 Eikqm 351
                 E++++
  KHJ32319.1 162 EVNTL 166
                 99887 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 6.1
       IFT57 221 dWrahleqmkkhkk..sieeslpetksqlkklhedis 255
                  Wr++++   ++ +   + +s++++k++l+ l++d s
  KHJ32319.1 270 PWRTSIDLWDTLDRryILLDSTQTAKNALDTLYQDRS 306
                 6888888888887765678999999999999999876 PP

>> DUF2968  Protein of unknown function (DUF2968)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   5.8   0.00089      0.43     111     177 ..      68     134 ..      62     137 .. 0.93
   2 ?   -0.5   0.0       1.7   8.4e+02     161     179 ..     153     171 ..     144     172 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00089
     DUF2968 111 lerqiaasearaerLqadlavarqQeqavaerQkqarkeaaaLeaqreaaqaqlralqrqirqLqaq 177
                 l+ q++ + +++++L++dl  a+ Q +++ +  ++a++e a+L++  ++  +q++a  + i++L+  
  KHJ32319.1  68 LKSQLELKGKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSR 134
                 5678999999****************************************************99975 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.7
     DUF2968 161 qaqlralqrqirqLqaqqe 179
                  +++++lq ++++Lqa+++
  KHJ32319.1 153 NDKISSLQSEVNTLQATSN 171
                 5788999999999999877 PP

>> HrpB7  Bacterial type III secretion protein (HrpB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.3    0.0015      0.74      88     133 ..      86     131 ..      77     180 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.0015
       HrpB7  88 vraaeaelaaarqaldaaedavaatarkiaRndaqidacrerierl 133
                 ++aa+++++ +r al  a++++a  +++      qi+a  + i+ l
  KHJ32319.1  86 LGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNL 131
                 5555555555555555555555555555555555554433333333 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   3.5     0.059        28      13      62 ..      79     132 ..      62     141 .. 0.60
   2 ?    8.6   0.2    0.0053       2.5      11      35 ..     147     171 ..     136     180 .. 0.83
   3 ?   -1.1   0.1       5.5   2.7e+03      16      28 ..     337     355 ..     328     387 .. 0.49

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.059
     NPV_P10  13 ikavddkVdalqqqvddvqenl....pdvtelnekLdaqsaqLaeletkvenIq 62 
                 ++++++ + a q qv+++++ l    +++  ln+  ++ ++q+++  + ++n +
  KHJ32319.1  79 VSKLNSDLGAAQRQVEELRTALshahQEIAVLNQTTNQKTQQIEARLNDINNLN 132
                 666777777777777666655411114445555555555555544444444444 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0053
     NPV_P10  11 adikavddkVdalqqqvddvqenlp 35 
                 + i+ ++dk+++lq++v+ +q+ ++
  KHJ32319.1 147 DKISFLNDKISSLQSEVNTLQATSN 171
                 468899*************998765 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 5.5
     NPV_P10  16 vddkVda.lqqqv.....d 28 
                 +++k+++ +++qv     d
  KHJ32319.1 337 LNKKITSvIDNQVnlpnaD 355
                 4555543134444333332 PP

>> KASH_CCD  Coiled-coil region of CCDC155 or KASH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   8.2    0.0016      0.78      64     151 ..      88     175 ..      67     185 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0016
    KASH_CCD  64 lleeEleelkalvkeleEkrarlkaqnkqlekenqsLiakiesLqeenikllaekdelkkklkeLlkekaeLkkqlheleellaekea 151
                 + +  +eel++ +++   + a l++ ++q  +  +     i++L+ ++ ++  ++++ + k+  L +++++L++++  l+++ + k  
  KHJ32319.1  88 AAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDKISFLNDKISSLQSEVNTLQATSNAKGI 175
                 4567789999999888777777777777777777777788999999999999999999999999999999999999999988887754 PP

>> AAA_13  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   3.3   0.00017     0.083     301     400 ..      71     171 ..      35     222 .. 0.69
   2 ?    0.3   0.2      0.41     2e+02     299     364 ..     291     358 ..     278     380 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00017
      AAA_13 301 elleklkavsdeasensafeedkeelkaeaealeeqLkglqraleaKrkepfksve.lesvkakiesikklvaeineliakhNekvanleeekeeakkk 398
                 +l  k k+vs+ +s   a+++++eel+++++   +++  l++  ++K +++ ++++ +++++++++++  + ++ n+ i+  N k+++l++e+++++  
  KHJ32319.1  71 QLELKGKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNdINNLNSRLSQVILDRSTDNDKISFLNDKISSLQSEVNTLQAT 169
                 444445566666777777777777777777777777777777777777777776665677777777777777777777777777777777777776655 PP

      AAA_13 399 le 400
                   
  KHJ32319.1 170 SN 171
                 44 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.41
      AAA_13 299 kselleklkavsdeasensafeedkeelkaea.ealeeqLkglqraleaKrkepfk.svelesvkaki 364
                 ++ +++ l+++ ++ s++  f+ d + + ++a    +++ + l+++l++K++ +   +v+l ++++ +
  KHJ32319.1 291 TQTAKNALDTLYQDRSAYGDFKADFDHYAERArYDNRSKVDLLRKRLNKKITSVIDnQVNLPNADDYA 358
                 44567778888888888888888866655555267778899999999999999887566665555554 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   7.6    0.0013      0.62      31     131 ..      68     172 ..      64     185 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0013
         GAS  31 lKeeieelkkkeernekelseisqenkrlkepLkkaeeeveeLrk....qlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvekerdel 125
                 lK+++e + kk  + + +l +++ + ++l+  L +a +e++ L++    + ++ e   ++++nl++rl+++    ++   +   l+++++++++e ++l
  KHJ32319.1  68 LKSQLELKGKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQttnqKTQQIEARLNDINNLNSRLSQVILDRSTDNDKISFLNDKISSLQSEVNTL 166
                 677777777888888888888888888888888888888888877322233333333444555555555555555555555556777777777777777 PP

         GAS 126 ykkfea 131
                 +++ +a
  KHJ32319.1 167 QATSNA 172
                 776665 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   3.6     0.018       8.8      42      91 ..      77     127 ..      68     138 .. 0.79
   2 ?    5.1   0.1      0.05        24      29      57 ..     141     169 ..     125     186 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.018
  Tropomyosin_1  42 kknqqleeevekleeklkeakekaeesekk.ktnnealtrkiqlLEeelee 91 
                    kk+++l++++  ++ +++e ++++++++++ +  n + ++k q++E  l++
     KHJ32319.1  77 KKVSKLNSDLGAAQRQVEELRTALSHAHQEiAVLNQTTNQKTQQIEARLND 127
                    789999999999999999999999988887245677999999999987764 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.05
  Tropomyosin_1  29 enlekeqeiksLtkknqqleeevekleek 57 
                    ++   +++i+ L+ k++ l++ev++l+++
     KHJ32319.1 141 DRSTDNDKISFLNDKISSLQSEVNTLQAT 169
                    56677899****************99986 PP

>> YscO-like  YscO-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   2.0   6.4e-05     0.031      81     144 ..      67     130 ..      62     134 .. 0.91
   2 ?   -0.8   1.0       2.9   1.4e+03     105     136 ..     189     220 ..     116     223 .. 0.54

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6.4e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   YscO-like  81 vvkeelkqeekkvekQkekVkvAerkvEqareelakkrkeveklekhkeewlkevkkeeekree 144
                 v+k +l+ + kkv k +    +A+r+vE+ r+ l ++++e+  l++  ++ ++++ +  +++++
  KHJ32319.1  67 VLKSQLELKGKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINN 130
                 79999****************************************9999999999887776665 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 2.9
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   YscO-like 105 rkvEqareelakkrkeveklekhkeewlkevk 136
                 r+     e++  ++k+ ek ++  e w  +v+
  KHJ32319.1 189 RRTRSDPEKFSGAQKDTEKRQTMYESWKTQVQ 220
                 44444455666778888888888888887776 PP

>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   7.7    0.0022         1       7      87 ..      78     168 ..      72     173 .. 0.78
   2 ?   -0.4   0.4       3.2   1.5e+03      18      35 ..     152     169 ..     128     222 .. 0.56

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0022
      CENP-H   7 qrdelssellklsqelrelqeeltevekenlrlkrknrelaael.lelakekesek.........eklkeelekleaelkksrqrwrvvkn 87 
                 +  +l+s+l + +++++el+ +l+++ +e+  l+++++++++++ ++l+  ++  +         ++++++++ l  ++   ++++ +++ 
  KHJ32319.1  78 KVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIeARLNDINNLNSrlsqvildrSTDNDKISFLNDKISSLQSEVNTLQA 168
                 5678999*************************************54776666555578888887755666666666666666666666655 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 3.2
      CENP-H  18 lsqelrelqeelteveke 35 
                 l+ ++++lq+e++++++ 
  KHJ32319.1 152 LNDKISSLQSEVNTLQAT 169
                 233333333333333332 PP

>> HOOK  HOOK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   3.9    0.0063       3.1     534     590 ..      67     123 ..      61     127 .. 0.86
   2 ?    4.1   0.4     0.021        10     504     569 ..     152     221 ..     142     224 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0063
        HOOK 534 llkkkleehleklkevqeelqkkkeqleelepklssnkqkieeleeaLkkkdedlka 590
                  lk++le + +k+++++++l   + q+eel  +ls++ q i+ l+++ ++k ++++a
  KHJ32319.1  67 VLKSQLELKGKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEA 123
                 578999999999999999999999999999999999999999999999999888776 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.021
        HOOK 504 anqrileLeaqveelqkalqeqg...skaed.ssllkkkleehleklkevqeelqkkkeqleelepklss 569
                  n++i++L+++v+ lq + +++g   sk+ d ++   ++  +  ek + +q++++k++ + e+ + ++++
  KHJ32319.1 152 LNDKISSLQSEVNTLQATSNAKGistSKTTDvATPIPRRTRSDPEKFSGAQKDTEKRQTMYESWKTQVQQ 221
                 689**************9999874335666656667888999999***********99999998888876 PP

>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   5.4     0.032        15       8      98 ..     119     222 ..      64     223 .. 0.68

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.032
  Syntaxin-6_N   8 eeVqkslnkaeslyrrwerlledtssstseeldetrteLrkalrsiewdledLeetv..................riveknpskfkidekelsrrra 86 
                   ++++  ln +++l +r +++  d s+      ++  + L+ +++s++ +++ L+ t                   r  +++p+kf+  +k+ ++r+ 
    KHJ32319.1 119 QQIEARLNDINNLNSRLSQVILDRST-----DNDKISFLNDKISSLQSEVNTLQATSnakgistskttdvatpipRRTRSDPEKFSGAQKDTEKRQT 210
                   45555666666666666544433333.....2222334555555566666666555544444444444444444444467***************** PP

  Syntaxin-6_N  87 fveevreevkem 98 
                   + e+ + +v+++
    KHJ32319.1 211 MYESWKTQVQQV 222
                   *********986 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   3.3     0.015       7.4      40     101 ..      69     127 ..      27     139 .. 0.69
   2 ?    5.7   4.2     0.041        20      25      76 ..     107     175 ..     103     187 .. 0.82
   3 ?   -1.7   0.0       8.5   4.1e+03      40      43 ..     346     349 ..     297     382 .. 0.49

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.015
                 HHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHH CS
       DUF16  40 eakvdklgeqinkleqkvekqgekikelkveqkaqgeelnkvdetleliletLqkinkRlDs 101
                 + +++ +g++++kl+    + + +++el+      ++e+  +++t +   +  q+i+ Rl  
  KHJ32319.1  69 KSQLELKGKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTN---QKTQQIEARLND 127
                 45666788888888888888888888888888888888874443333...222223333322 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.041
                 HHHB-..BHHHHHHHHHHHH....................HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       DUF16  25 lnefkdsnkqrLkkieakvd.................klgeqinkleqkvekqgekikelkveqkaqge 76 
                 +    + ++q+ ++iea+++                 + + +i+ l++k++ ++ +++ l+++ +a+g 
  KHJ32319.1 107 IAVLNQTTNQKTQQIEARLNdinnlnsrlsqvildrsTDNDKISFLNDKISSLQSEVNTLQATSNAKGI 175
                 5556788999999****9999999999999999998888889999999999999999999999998876 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 8.5
                 HHHH CS
       DUF16  40 eakv 43 
                 +++v
  KHJ32319.1 346 DNQV 349
                 2222 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   4.7     0.011       5.1     121     179 ..      81     135 ..      62     141 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.011
     UPF0242 121 qLqekleaiaedfeelkleleeqLaekqellqeyqetieeqrsvlekrqdqieqLeskV 179
                 +L++ l a+++++ee    l  +L + ++ +  +++t++++ + +e r + i++L+s+ 
  KHJ32319.1  81 KLNSDLGAAQRQVEE----LRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRL 135
                 444444454444444....4456777888888899999999999999999999998875 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   5.3    0.0017      0.82      50     115 ..      73     138 ..      39     169 .. 0.59
   2 ?   -1.0   0.2       4.8   2.3e+03      14      43 ..     294     323 ..     291     351 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.0017
      APG6_N  50 eeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynelqlellel 115
                 e   ++++kl+++  +++++ +el ++ +   +e+a l ++++++ ++ e+ +++ n+l+  l++ 
  KHJ32319.1  73 ELKGKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQV 138
                 444455555555555555555555555555555555555555555555555555555555554443 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 4.8
      APG6_N  14 ldkqleqaekerdaYeeflkklkkekkeee 43 
                  ++ l+++ ++r aY +f + ++ +++ ++
  KHJ32319.1 294 AKNALDTLYQDRSAYGDFKADFDHYAERAR 323
                 578899999999999999999998865543 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   5.9      0.69   3.3e+02      14      62 ..      80     128 ..      70     139 .. 0.45
   2 ?    7.4   0.1     0.012       5.8      12      37 ..     148     173 ..     146     223 .. 0.74

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.69
        ZapB  14 qkaidtitlLqmeieeLkeeneelkeenreleeeneqlkeereawqerl 62 
                 +k+   + + q ++eeL+   +   +e++ l++  +q  ++ ea  + +
  KHJ32319.1  80 SKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDI 128
                 4444444444555555555555555555555533333333333333333 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.012
        ZapB  12 kiqkaidtitlLqmeieeLkeeneel 37 
                 ki+ + d+i++Lq e+  L++ +++ 
  KHJ32319.1 148 KISFLNDKISSLQSEVNTLQATSNAK 173
                 78888899999999999999988764 PP

>> FliD_N  Flagellar hook-associated protein 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.1       1.3   6.3e+02      27      54 ..      69      96 ..      67     112 .. 0.68
   2 ?    6.9   8.6     0.021        10      20      82 ..     110     173 ..      92     186 .. 0.64
   3 ?    1.2   0.0       1.2   5.9e+02      22      47 ..     197     222 ..     188     260 .. 0.86
   4 ?    0.7   0.1       1.8   8.6e+02      22      52 ..     293     328 ..     288     359 .. 0.65

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 1.3
                XXXXXXXHHHHHHHHHHHHHHHHHHHHH CS
      FliD_N 27 ktklewkqsayrelnsklsnlksalsal 54
                k++le k +++++lns+l + + ++++l
  KHJ32319.1 69 KSQLELKGKKVSKLNSDLGAAQRQVEEL 96
                5677778888888888888777766544 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.021
                 XXX.XXXXXXXXXXXHHHHHHHHHHHHHHHHHHHHHXX.GGGGGXEEEEECSTTTEEEEEETTS- CS
      FliD_N  20 ldk.leqkktklewkqsayrelnsklsnlksalsalsk.sstfsakkatssdesvvtatassgaa 82 
                 l++  +qk +++e++ +++++lns ls+++ + s   + + +f + k +s +++v t +a+s+a+
  KHJ32319.1 110 LNQtTNQKTQQIEARLNDINNLNSRLSQVILDRS-TDNdKISFLNDKISSLQSEVNTLQATSNAK 173
                 444478999*********************9663.222244444555555555555555555554 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 1.2
                 XXXXXXXXXXXXHHHHHHHHHHHHHH CS
      FliD_N  22 kleqkktklewkqsayrelnsklsnl 47 
                 k+  +++++e++q+ y++ +++++++
  KHJ32319.1 197 KFSGAQKDTEKRQTMYESWKTQVQQV 222
                 577789999********999999875 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 1.8
                 XXXXXXXXXXXXHHHHHHHHHHHHHHHHHH.....H CS
      FliD_N  22 kleqkktklewkqsayrelnsklsnlksal.....s 52 
                 + +++  +l + +say++++ +++   + +     s
  KHJ32319.1 293 TAKNALDTLYQDRSAYGDFKADFDHYAERArydnrS 328
                 466777888888999999999998888766443321 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   3.5     0.026        12      11      75 ..      68     133 ..      66     140 .. 0.71
   2 ?    7.1   4.5     0.014       6.6      26      88 ..     108     170 ..      98     172 .. 0.90
   3 ?    0.3   0.0       1.8   8.9e+02      43      70 ..     198     225 ..     195     227 .. 0.85
   4 ?   -0.2   0.0       2.5   1.2e+03      27      54 ..     348     375 ..     343     381 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.026
     BLOC1_2  11 leaeleatvedyklLeklNeaasekykklkdvaaslekkleklnekye.elqpylqqidqiekqvt 75 
                 l+++le   ++++ L+    aa++++++l+++++++++++  ln++ + + q+   ++++i++  +
  KHJ32319.1  68 LKSQLELKGKKVSKLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNqKTQQIEARLNDINNLNS 133
                 67888888888888888889999999****999999999999887655344444444554444333 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.014
     BLOC1_2  26 eklNeaasekykklkdvaaslekkleklnekyeelqpylqqidqiekqvteLeeavseLDeys 88 
                   lN+++++k ++++ +++++++  ++l++     +   ++i  +++++++L++ v+ L + s
  KHJ32319.1 108 AVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDKISFLNDKISSLQSEVNTLQATS 170
                 569***************************9999999999*************9999997665 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 1.8
     BLOC1_2  43 aaslekkleklnekyeelqpylqqidqi 70 
                  ++++k+ ek + +ye+ + ++qq+  +
  KHJ32319.1 198 FSGAQKDTEKRQTMYESWKTQVQQVLLV 225
                 6788999****************99655 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 2.5
     BLOC1_2  27 klNeaasekykklkdvaaslekklekln 54 
                 ++N   +  y+ ++++++s++++l++ +
  KHJ32319.1 348 QVNLPNADDYAGWSEMINSIARNLQQQE 375
                 67888889999999*****999999865 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   1.7    0.0054       2.6      23      75 ..      81     133 ..      76     140 .. 0.77
   2 ?    0.2   0.2       1.9   9.1e+02      34      61 ..     148     173 ..     142     185 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0054
      DUF948  23 klkktldeaaatieelekqvdpilkevedllakvnelledvneklekvdplte 75 
                 kl++ l +a++++eel+  +    +e++ l +++n+ +++++ +l+++++l +
  KHJ32319.1  81 KLNSDLGAAQRQVEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNS 133
                 66777788888888888888888888888888888888888888888887755 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 1.9
      DUF948  34 tieelekqvdpilkevedllakvnelle 61 
                  i  l++++ ++  ev++l a++n+  +
  KHJ32319.1 148 KISFLNDKISSLQSEVNTLQATSNA--K 173
                 5667889999999999999999887..4 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   4.3     0.009       4.4      54     122 ..      93     161 ..      67     168 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.009
     DUF1664  54 seslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskleriee 122
                  e+l+++  h  ++i+ ++++ ++ ++ +++  ++++++++ ls++  d ++ ++ ++ l+ k++++++
  KHJ32319.1  93 VEELRTALSHAHQEIAVLNQTTNQKTQQIEARLNDINNLNSRLSQVILDRSTDNDKISFLNDKISSLQS 161
                 36677777788899**********999999999*************99999999999999999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (561 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1404  (0.0783089); expected 358.6 (0.02)
Passed bias filter:                      716  (0.0399353); expected 358.6 (0.02)
Passed Vit filter:                       159  (0.00886831); expected 17.9 (0.001)
Passed Fwd filter:                        46  (0.00256568); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              37  [number of targets reported over threshold]
# CPU time: 0.88u 0.27s 00:00:01.14 Elapsed: 00:00:00.42
# Mc/sec: 4038.11
//
Query:       KHJ32320.1  [L=531]
Description: hypothetical protein EV44_g3888 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.018   15.5   3.3        2.8    8.4   0.1    3.3  3  NPV_P10         Nucleopolyhedrovirus P10 protein
      0.037   14.4   4.9        1.3    9.5   0.1    3.3  2  LPP             Lipoprotein leucine-zipper
      0.042   12.7   0.2      0.083   11.8   0.2    1.4  1  Spc7            Spc7 kinetochore protein
      0.043   13.9   0.3      0.085   13.0   0.3    1.5  1  zf-CCHC         Zinc knuckle
      0.045   14.2   0.3        7.1    7.1   0.1    2.8  2  FlaC_arch       Flagella accessory protein C (FlaC)
       0.12   12.6   0.9       0.29   11.4   0.9    1.6  1  TMF_TATA_bd     TATA element modulatory factor 1 TATA binding
       0.17   12.4   1.0         16    6.1   0.0    3.0  3  DUF16           Protein of unknown function DUF16
       0.24   10.0   1.6        1.3    7.6   1.6    1.9  1  DUF3138         Protein of unknown function (DUF3138)
        0.4   11.1   2.5        1.1    9.7   0.1    2.6  2  Flagellin_C     Bacterial flagellin C-terminal helical region
       0.48   10.8   5.9      0.099   13.1   1.9    1.8  2  Fez1            Fez1
       0.61   10.4   4.0       0.61   10.4   0.3    2.9  3  Retrotrans_gag  Retrotransposon gag protein
       0.66   10.1   5.1         19    5.4   0.1    3.4  3  HR1             Hr1 repeat
       0.81    9.7   4.8       0.25   11.4   0.4    2.3  3  YscO-like       YscO-like protein


Domain annotation for each model (and alignments):
>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.1     0.013        18      30      60 ..      72     102 ..      61     117 .. 0.75
   2 ?    8.4   0.1    0.0021       2.8      12      35 ..     119     142 ..     110     151 .. 0.85
   3 ?   -0.8   0.1       1.6   2.2e+03      16      44 ..     308     342 ..     299     358 .. 0.49

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.013
     NPV_P10  30 vqenlpdvtelnekLdaqsaqLaeletkven 60 
                 ++ + ++v++ln+ L a + q++el t++++
  KHJ32320.1  72 LELKGKKVSKLNSDLGAAQRQVEELRTALSH 102
                 4555678999999999999999999997654 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0021
     NPV_P10  12 dikavddkVdalqqqvddvqenlp 35 
                  i+ ++dk+++lq++v+ +q+ ++
  KHJ32320.1 119 KISFLNDKISSLQSEVNTLQATFN 142
                 688899***********9999766 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.6
     NPV_P10  16 vddkVda.lqqqv.....ddvqenlpdvtelnekL 44 
                 +++k+++ +++qv     dd +  ++ ++ +  +L
  KHJ32320.1 308 LNKKITSvIDNQVnlpnaDDYAGWSEMINSIARNL 342
                 45555431344553333333333333333344444 PP

>> LPP  Lipoprotein leucine-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.2     0.016        22       1      36 [.      78     106 ..      70     111 .. 0.57
   2 ?    9.5   0.1   0.00093       1.3       8      31 ..     119     142 ..     117     145 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.016
         LPP   1 kldeLssqVsqLkskvdqlssdvnsakaaaqaakeE 36 
                 k+++L+s++ + +++v++l         a+  a +E
  KHJ32320.1  78 KVSKLNSDLGAAQRQVEELRT-------ALSHAHKE 106
                 444555555555555555554.......44444443 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00093
         LPP   8 qVsqLkskvdqlssdvnsakaaaq 31 
                  +s L++k+++l+s+vn ++a  +
  KHJ32320.1 119 KISFLNDKISSLQSEVNTLQATFN 142
                 68999***********99998665 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2     6e-05     0.083     211     290 ..      68     149 ..      60     160 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6e-05
        Spc7 211 lkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeck..gwsesevsrlkeevkaleeltgwkivsls 290
                 lk+++e k k++++l+++l + + ++eel++  s++++eia   +    +   ++ ++ +s+l++ev++l+ + + k +s s
  KHJ32320.1  68 LKSQLELKGKKVSKLNSDLGAAQRQVEELRTALSHAHKEIAVILDRSTDNDkiSFLNDKISSLQSEVNTLQATFNAKGISTS 149
                 4566667777777777777777777777777777777777754333322220145567788888888888777776666655 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   6.2e-05     0.085       3      15 ..     398     410 ..     396     410 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.2e-05
                 TSSSSSSSSTTTT CS
     zf-CCHC   3 CynCGepGHiard 15 
                 C  CGe GHia+d
  KHJ32320.1 398 CVACGEKGHIAKD 410
                 667*********9 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.1    0.0052       7.1       7      35 ..      77     105 ..      73     112 .. 0.83
   2 ?    4.1   0.0     0.046        63       1      23 [.     119     141 ..     119     148 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0052
   FlaC_arch   7 nklsklsteletvkkeneelsksveelke 35 
                 +k+skl + l+ ++++ eel++ +    +
  KHJ32320.1  77 KKVSKLNSDLGAAQRQVEELRTALSHAHK 105
                 699*****************998876555 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.046
   FlaC_arch   1 ridelEnklsklsteletvkken 23 
                 +i  l  k+s+l++e++t+++++
  KHJ32320.1 119 KISFLNDKISSLQSEVNTLQATF 141
                 566788999*********99876 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.9   0.00021      0.29      19      79 ..      77     140 ..      69     144 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00021
  TMF_TATA_bd  19 seirrlEgElaslkeelerleaerdeareeivklm...keneelkelkkeleelekeleelqer 79 
                  +++ +l ++l ++++++e+l +  + a +ei+ ++   ++n++ + l++++++l++e++ lq  
   KHJ32320.1  77 KKVSKLNSDLGAAQRQVEELRTALSHAHKEIAVILdrsTDNDKISFLNDKISSLQSEVNTLQAT 140
                  578999************************98776444789999999*************9975 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0     0.011        16      47      97 ..      62     112 ..      26     117 .. 0.69
   2 ?    3.5   0.0     0.071        98      48      76 ..     118     146 ..     114     161 .. 0.63
   3 ?   -1.6   0.0       2.8   3.9e+03      43      43 ..     320     320 ..     269     356 .. 0.51

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.011
                 .HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHH CS
       DUF16  47 geqinkleqkvekqgekikelkveqkaqgeelnkvdetleliletLqkink 97 
                 + ++ +l+ + e +g+k+++l+ +  a +++++++  +l    + ++ i +
  KHJ32320.1  62 DSKFGVLKSQLELKGKKVSKLNSDLGAAQRQVEELRTALSHAHKEIAVILD 112
                 567777888888888888888888888888788777766666666655555 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.071
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       DUF16  48 eqinkleqkvekqgekikelkveqkaqge 76 
                  +i+ l++k++ ++ +++ l+++ +a+g 
  KHJ32320.1 118 DKISFLNDKISSLQSEVNTLQATFNAKGI 146
                 45666666666666666666666666654 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 2.8
                 H CS
       DUF16  43 v 43 
                 v
  KHJ32320.1 320 V 320
                 2 PP

>> DUF3138  Protein of unknown function (DUF3138)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   1.6   0.00094       1.3      22      69 ..      74     156 ..      53     194 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00094
     DUF3138  22 atadrikalkaqltalqrqvkelraalaaak...................................aaaGgkissqkaaaaaa 69 
                  + +++ +l++ l a qrqv+elr+al  a+                                   +    +is+ k+a  a+
  KHJ32320.1  74 LKGKKVSKLNSDLGAAQRQVEELRTALSHAHkeiavildrstdndkisflndkisslqsevntlqaTFNAKGISTSKTADVAT 156
                 56789999*******************99997888888888888887777766655555555555311222245555554444 PP

>> Flagellin_C  Bacterial flagellin C-terminal helical region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1   0.00076       1.1       9      40 ..      77     108 ..      70     121 .. 0.86
   2 ?   -0.0   0.2      0.83   1.2e+03      26      56 ..     302     332 ..     295     353 .. 0.62

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00076
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH CS
  Flagellin_C   9 tdldkvrselGavqnRlesaitnlkaqsenlk 40 
                  ++++k  s+lGa+q ++e+  t+l+ + + ++
   KHJ32320.1  77 KKVSKLNSDLGAAQRQVEELRTALSHAHKEIA 108
                  6899******************9999887765 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.83
                  HHHHHHHHHHHCHHHHHHCHHCCHHHHHHHH CS
  Flagellin_C  26 esaitnlkaqsenlkaaesrledvDpaeest 56 
                  +   ++l++ ++ +  ++++l ++D ++  +
   KHJ32320.1 302 DLLRKRLNKKITSVIDNQVNLPNADDYAGWS 332
                  4444566666666666666666666665544 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.9   7.2e-05     0.099      36     140 ..      74     179 ..      66     195 .. 0.67
   2 ?   -2.0   0.1         3   4.1e+03     130     146 ..     294     310 ..     258     353 .. 0.52

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 7.2e-05
        Fez1  36 lka.qlrelrakleekeeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaa......lesdeakaqrqea 127
                 lk+ ++  l+++l + +++++el+++l++ ++e+ v+ ++    +++ + l++k+++l++e++ l+ +++++  +++++a            +  r++ 
  KHJ32320.1  74 LKGkKVSKLNSDLGAAQRQVEELRTALSHAHKEIAVILDRST-DNDKISFLNDKISSLQSEVNTLQATFNAKGISTSKTAdvatsiP-----RRTRSDP 166
                 554135677888888889999999999999999888876654.467999******************99998877777664333330.....3334444 PP

        Fez1 128 eeleelkreverl 140
                 e+ +  ++++e+ 
  KHJ32320.1 167 EKFSGAQKDTEKR 179
                 4444444444443 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 3
        Fez1 130 leelkreverlraeLke 146
                   + +++v+ lr++L++
  KHJ32320.1 294 RYDNRSKVDLLRKRLNK 310
                 22333333333333333 PP

>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.6   3.5e+03      26      44 ..      14      31 ..       3      36 .. 0.72
   2 ?   10.4   0.3   0.00044      0.61      26      92 ..     246     306 ..     212     310 .. 0.78
   3 ?   -2.0   0.1       3.2   4.5e+03      38      56 ..     479     497 ..     473     502 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.6
  Retrotrans_gag 26 sesWkdlkkaflktflpse 44
                     +sW +l++a   + +p +
      KHJ32320.1 14 QQSWPNLSSAIEGHQFP-D 31
                    579****9999999998.3 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00044
  Retrotrans_gag  26 sesWkdlkkaflktflpserkdqleeelsslrQgtesvreYvtrfktladqldevlteeakiekfla 92 
                     ++ W++l+    +++   + ++++++ l +l Q++   r++ + f+++a +++   ++ +k+  +++
      KHJ32320.1 246 IDLWDTLD----RRYILLDSTQTAKNALDTLYQDKSAYRDFKADFDHYAERAR--YDNRSKVDLLRK 306
                     44555555....555555677999999**************************..777777766555 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 3.2
  Retrotrans_gag  38 ktflpserkdqleeelssl 56 
                     ++f+ps+ ++q++++l+ +
      KHJ32320.1 479 QNFQPSYFQAQTQAQLRAM 497
                     5777777778888888765 PP

>> HR1  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.2      0.31   4.3e+02      35      63 ..      77     105 ..      66     110 .. 0.75
   2 ?    3.9   0.1     0.044        60      42      61 ..     118     137 ..     111     140 .. 0.54
   3 ?    5.4   0.1     0.014        19      40      63 ..     290     313 ..     263     319 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.31
         HR1  35 kvrqeaeselsesnskielLreqLeelqa 63 
                 k  ++ +s l  +++ +e+Lr +L+  ++
  KHJ32320.1  77 KKVSKLNSDLGAAQRQVEELRTALSHAHK 105
                 55678888899999999999999987665 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.044
         HR1  42 selsesnskielLreqLeel 61 
                  ++s+ n ki+ L+++ ++l
  KHJ32320.1 118 DKISFLNDKISSLQSEVNTL 137
                 34455555555555555555 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.014
         HR1  40 aeselsesnskielLreqLeelqa 63 
                 ae    + +sk++lLr++L++   
  KHJ32320.1 290 AERARYDNRSKVDLLRKRLNKKIT 313
                 5666668899*********76544 PP

>> YscO-like  YscO-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.4   0.00018      0.25      81     124 ..      67     110 ..      62     133 .. 0.90
   2 ?   -1.6   0.0       1.8   2.5e+03     111     136 ..     166     191 ..     109     193 .. 0.57
   3 ?   -1.3   0.1       1.4     2e+03      30      69 ..     271     314 ..     260     322 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00018
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   YscO-like  81 vvkeelkqeekkvekQkekVkvAerkvEqareelakkrkevekl 124
                 v+k +l+ + kkv k +    +A+r+vE+ r+ l +++ke+  +
  KHJ32320.1  67 VLKSQLELKGKKVSKLNSDLGAAQRQVEELRTALSHAHKEIAVI 110
                 79999***********************************9876 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.8
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
   YscO-like 111 reelakkrkeveklekhkeewlkevk 136
                  e++  ++k+ ek +   e w  +v+
  KHJ32320.1 166 PEKFSGAQKDTEKRQIMYESWKTQVQ 191
                 34555667777777777777777765 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHH---H CS
   YscO-like  30 aLekEkeklrkleeerd....kvkkhkkaKvaqlreeldkGtts 69 
                  L ++k   r  +++ d    +++ +++ Kv+ lr+ l+k  ts
  KHJ32320.1 271 TLYQDKSAYRDFKADFDhyaeRARYDNRSKVDLLRKRLNKKITS 314
                 55556666666555544111155667788999999998886665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1206  (0.0672653); expected 358.6 (0.02)
Passed bias filter:                      764  (0.0426125); expected 358.6 (0.02)
Passed Vit filter:                        94  (0.0052429); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 3747.06
//
Query:       KHJ32321.1  [L=613]
Description: hypothetical protein EV44_g5891 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       432  (0.024095); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.37
# Mc/sec: 4962.80
//
Query:       KHJ32322.1  [L=728]
Description: putative u1 snrnp-associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-15   55.0   0.4    2.4e-14   53.4   0.2    2.0  2  PWI         PWI domain
    0.00011   21.9   0.0     0.0003   20.6   0.0    1.8  1  RRM_1       RNA recognition motif. (a.k.a. RRM, RBD, or RNP d
  ------ inclusion threshold ------
      0.077   13.0   3.1       0.94    9.5   1.1    2.6  2  DUF4298     Domain of unknown function (DUF4298)


Domain annotation for each model (and alignments):
>> PWI  PWI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0         1   6.1e+03      30      51 ..     567     587 ..     563     589 .. 0.81
   2 !   53.4   0.2   3.9e-18   2.4e-14       1      71 [.     654     722 ..     654     723 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1
         PWI  30 LeeekeldpkklqinltgfLek 51 
                 L+e k + p++   +++g+Le+
  KHJ32322.1 567 LKE-KAVAPRRTVAEVEGLLED 587
                 544.689999*********997 PP

  == domain 2  score: 53.4 bits;  conditional E-value: 3.9e-18
         PWI   1 dvlkpWIakkitellgfeDdvvieyvlnlLeeekeldpkklqinltgfLekeaekFvkeLWelllsaqsse 71 
                 ++l+p+++kki e+lg++++ ++e+v +++    + +p+ l ++l+g L++eae+ vk+LW+++  +++se
  KHJ32322.1 654 EKLRPFVEKKIMEYLGVQEQLLVEVVEAHIRA--KGKPQDLVEQLEGALDEEAEVLVKKLWRMVAFYSESE 722
                 689***************************77..69*****************************999987 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0     5e-08    0.0003       1      67 [.     106     172 ..     106     175 .. 0.95

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 5e-08
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggr 67 
                 +f+ ++++ v ++ +++++s +G++++ +   d+ gk   f+f ++e+ e+   A+++l   +++ +
  KHJ32322.1 106 IFIAGITEGVGNDGIERILSSVGRFRRWDRAIDAEGKQCSFGFAQYEDVESLSIAVRTLKDIEIPLK 172
                 89********************************************************998888655 PP

>> DUF4298  Domain of unknown function (DUF4298)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   1.1   0.00016      0.94      13      52 ..     459     499 ..     449     520 .. 0.71
   2 ?    2.4   0.0     0.026   1.5e+02      12      45 ..     690     724 ..     685     727 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00016
                 HHHHHHHHHHHHHHHTHHHHHHHHHHHTS.HHHHHHHTS-- CS
     DUF4298  13 allqqLeealeqwkklqkklakLdeYYqs.eqwredleasn 52 
                 +  ++L + l++w++  + ++k++eYY     w + + a++
  KHJ32322.1 459 SEREKLAQRLKEWNDDVEATRKVEEYYLDrSMWIRNRTAFR 499
                 56789**********************65145644444433 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.026
                 HHHHHHHHHHHH.HHHHTHHHHHHHHHHHTSHHHH CS
     DUF4298  12 sallqqLeeale.qwkklqkklakLdeYYqseqwr 45 
                 ++l++qLe al+ + + l kkl  + ++Y+  +++
  KHJ32322.1 690 QDLVEQLEGALDeEAEVLVKKLWRMVAFYSESEYK 724
                 78999***999625677899*********988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (728 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1574  (0.0877907); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.79u 0.29s 00:00:01.08 Elapsed: 00:00:00.47
# Mc/sec: 4691.83
//
Query:       KHJ32323.1  [L=508]
Description: putative saga complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.8e-09   36.3   0.0    1.2e-08   35.0   0.0    1.7  1  Myb_DNA-binding  Myb-like DNA-binding domain
    8.2e-09   35.1   6.9    8.2e-09   35.1   6.9    1.7  2  ZZ               Zinc finger, ZZ type
    4.6e-06   26.9   0.0    1.2e-05   25.5   0.0    1.6  1  SWIRM            SWIRM domain
  ------ inclusion threshold ------
       0.15   12.2   1.8          2    8.5   0.2    2.5  2  DUF3736          Protein of unknown function (DUF3736)


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.0   2.6e-12   1.2e-08       3      45 ..      81     125 ..      79     126 .. 0.95

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 2.6e-12
                      SSBHHHHHHHHHHHHHHT.TCHHHHHHHHT.SS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 kWteeEdelLleavkkhG.nrWkkIaerlg.gRtekqcrsrwrny 45 
                      +W ++E++lLle+ + +G ++W+ Ia+++g  R + +++ +++++
       KHJ32323.1  81 NWGADEELLLLEGAEIYGfGSWADIADHIGgYRDKDEVKAHYQKV 125
                      8*****************************66***********85 PP

>> ZZ  Zinc finger, ZZ type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   6.9   1.8e-12   8.2e-09       4      44 ..      18      61 ..      16      62 .. 0.93
   2 ?   -3.3   0.2       1.8   8.1e+03      33      41 ..     406     414 ..     406     417 .. 0.63

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 1.8e-12
                -EE-TTT-S..EESSEEEES..SSSS-EE-HHHHHH..H---SS CS
          ZZ  4 kytCdgCseapligvRyhcl..rcsdYDLCqsCfst.hkagkhk 44
                ky Cd+Cs++ +  vR +c+   c dYDLC+ Cfs    +++h 
  KHJ32323.1 18 KYVCDVCSADITSTVRIRCAdpHCHDYDLCVLCFSNgEASHNHN 61
                799****************9556********************7 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.8
                 HHHHH.H-- CS
          ZZ  33 sCfsthkag 41 
                 +Cf++++  
  KHJ32323.1 406 NCFNSSTRN 414
                 699986554 PP

>> SWIRM  SWIRM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0   2.7e-09   1.2e-05       8      87 ..     437     505 ..     433     506 .. 0.92

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 2.7e-09
       SWIRM   8 pdslhpiEkellselfngkdktpeeYlkiRnkiialyrenpkeyltvteaqkalkrrrltgidvnllsrihefLerwGlI 87 
                  + l p+E el+++ +    ++p+ Yl+i++ i+++  ++ +  l++ ++++++k       d ++  ri++f+  +G++
  KHJ32323.1 437 SHLLLPEEIELCEKTR----IHPKPYLAIKENILREAIQT-NGMLKRRQVKELAK------VDPQKGARIFDFFIAHGWL 505
                 577899**********....*******************8.778******77777......7****************96 PP

>> DUF3736  Protein of unknown function (DUF3736)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.2   0.00045         2      29      86 ..     114     171 ..     111     218 .. 0.76
   2 ?    2.4   0.1     0.036   1.6e+02      58     124 ..     241     302 ..     230     314 .. 0.64

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00045
     DUF3736  29 deeeanaellkvmsgPpvlhLkldatvrkvafsrtigltslqkrkeliiekvlkrrrr 86 
                 d +e++a+ +kv    p   L+++a+ +  + ++ i ++ +q rk+  ie++++  r+
  KHJ32323.1 114 DKDEVKAHYQKVYLDSPKFPLPVRASLKDTQLLEEIPREEFQARKKRRIEERKEAARL 171
                 78899******9988888**************************99999999666333 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.036
     DUF3736  58 vafsrtigltslqkrkeliiekvlkrrrrlherspsParevtrktpqhllspryspeelvqepdfqq 124
                 v+  +   lt+ ++rk++i+e+ l        +  s + ++++k  + ll    +  ++++  dfq+
  KHJ32323.1 241 VMDIYNTRLTQRAERKKVIFEHNLLD-----YKKNSALDKKRTKEERELLNKAKPFARMMNRDDFQE 302
                 566778889************99444.....444444444444444444444444456666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       729  (0.0406604); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3711.60
//
Query:       KHJ32324.1  [L=403]
Description: putative adipose-regulatory protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-55  188.4   0.5    1.9e-55  188.0   0.5    1.2  1  Seipin    Putative adipose-regulatory protein (Seipin)


Domain annotation for each model (and alignments):
>> Seipin  Putative adipose-regulatory protein (Seipin)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.0   0.5   1.1e-59   1.9e-55       2     197 .]      38     255 ..      37     255 .. 0.98

  Alignments for each domain:
  == domain 1  score: 188.0 bits;  conditional E-value: 1.1e-59
      Seipin   2 illvlavilyilfyyayvpevilskpvhlqygkltsPyanvslnsdssllkenqkYdvsveLslPeseaNlelGnFmvelellsssgk........... 89 
                 ill++av++y lfy +++p+++++k +hlqyg + +Py+ ++l    s l ++q+Yd+ ++LslP+s++Nl  GnFm +l ll +s+k           
  KHJ32324.1  38 ILLGIAVFAYTLFYCNFIPQIEIQKVIHLQYGDGPHPYGIIPL---GSELISRQAYDIFLSLSLPRSPQNLARGNFMTTLALLRPSHKfntshfqklgi 133
                 89*****************************************...788************************************999*********** PP

      Seipin  90 ..............ilanssrpalLpyrsplvrllrtllllpllllglneesqtlrvplaesv..vennenpptsarvevqsraapelqiysAklrfea 172
                               +la ++r+a+++y+s+lv+l ++++ lpl++l l +e +tl++++ e v   ++++n p+ a +e+q++  +++qiy+A + f+a
  KHJ32324.1 134 sdmnspmsllgaedVLAVFRRSAIMKYTSHLVSLSSRIINLPLYMLSLLSEAETLTISIGEGVtfPRGWKNIPSLALLEIQAG--QDIQIYQAAILFKA 230
                 ***************************************************************9889999***********95..68************ PP

      Seipin 173 kltglrylmyshpilsfvvftllfw 197
                 k++glr+lmy+h+++sfv+ft lfw
  KHJ32324.1 231 KFSGLRWLMYNHRVISFVLFTGLFW 255
                 ************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       674  (0.0375927); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2892.34
//
Query:       KHJ32325.1  [L=804]
Description: putative coatamer subunit protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-11   42.7   0.0    8.1e-11   41.8   0.0    1.5  1  Surp      Surp module


Domain annotation for each model (and alignments):
>> Surp  Surp module
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   0.0   4.5e-15   8.1e-11       2      52 ..     355     407 ..     354     408 .. 0.96

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 4.5e-15
                 HHHHHHHHHHTT-S.SHHHHHHHH...T--TTSGGGSTT.STTHHHHHHHHHH CS
        Surp   2 eiIkktAqfVarnGkeFeqklrer..ernnpqFaFLkdpdhpyhayYrwrvde 52 
                 +iI+k+++    +G+eFe+ l++r  ++++ ++a+L+d ++   a+Yrwr++e
  KHJ32325.1 355 KIIHKVIEALLTHGPEFEALLMSRpdVQREEKWAWLWDARSTGAAWYRWRLWE 407
                 69**********************88899***********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (804 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       718  (0.0400469); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 5457.54
//
Query:       KHJ32326.1  [L=182]
Description: putative mitochondrial hypoxia responsive domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-22   79.4   1.0    2.1e-22   79.1   0.2    1.6  2  HIG_1_N   Hypoxia induced protein conserved region
     0.0055   16.7   2.6     0.0072   16.4   2.6    1.4  1  DUF2514   Protein of unknown function (DUF2514)
  ------ inclusion threshold ------
      0.029   13.7   0.1      0.054   12.8   0.1    1.4  1  DUF5561   Family of unknown function (DUF5561)
      0.032   13.7   0.0      0.045   13.2   0.0    1.2  1  DUF1593   Protein of unknown function (DUF1593)
        6.6    6.6  10.1       0.86    9.4   5.9    1.7  2  DivIC     Septum formation initiator


Domain annotation for each model (and alignments):
>> HIG_1_N  Hypoxia induced protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       2.1   7.5e+03      30      36 ..      20      26 ..      13      27 .. 0.81
   2 !   79.1   0.2   5.8e-26   2.1e-22       1      52 []      30      81 ..      30      81 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2.1
     HIG_1_N 30 qsnrlmr 36
                + ++lmr
  KHJ32326.1 20 RLQKLMR 26
                6799999 PP

  == domain 2  score: 79.1 bits;  conditional E-value: 5.8e-26
     HIG_1_N  1 eeplvpiGilatvgalvrglrsmkrgdskqsnrlmraRiaaQaftvlalvaG 52
                +epl+p+G+++t +al+ ++rs++ gd++++nr++raRi+aQ+ftv+a+vaG
  KHJ32326.1 30 QEPLIPLGCALTSWALFNASRSIRVGDHNRTNRMFRARIYAQGFTVAAMVAG 81
                59************************************************98 PP

>> DUF2514  Protein of unknown function (DUF2514)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   2.6     2e-06    0.0072      10      75 ..      74     137 ..      44     168 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 2e-06
     DUF2514  10 lvaalvwG..fahGrskeeaewekrwadrdaedsqakviaeeaaReeeqrrkaaaekavkdaqekaaa 75 
                  vaa+v G  +   ++++++e +k  ++r+a++++a    e ++R++e ++++a+ +a+        +
  KHJ32326.1  74 TVAAMVAGsmYWQTDRQKQKELQKIIDERKAQEKRARWLEELDYRDREAKEEQARKDAA----LMNRV 137
                 56777788878999*******************************99999887776554....44444 PP

>> DUF5561  Family of unknown function (DUF5561)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   1.5e-05     0.054     155     218 ..      58     120 ..      46     127 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.5e-05
     DUF5561 155 kdtarllseGifsDthlLalmYsGelCyWglkycekeesketdsessseelaalksesldfrei 218
                 + t r+ +  i++    +a m +G + yW+   ++++e +++++e +++e+ a+  e+ld+r+ 
  KHJ32326.1  58 NRTNRMFRARIYAQGFTVAAMVAGSM-YWQTDRQKQKELQKIIDERKAQEKRARWLEELDYRDR 120
                 5789999******************9.9***999999********9999999999999999875 PP

>> DUF1593  Protein of unknown function (DUF1593)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.3e-05     0.045      15      56 ..      60     101 ..      54     121 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.3e-05
                 HHHHHHHHHTGGGSEEEEEEE--BTTB------HHHHHHHHH CS
     DUF1593  15 aeSlvrlLlyanefdieglvatssvwhkkktkpekieeiida 56 
                 ++ + r  +ya+ f + ++va s +w+++++k++++++iid+
  KHJ32326.1  60 TNRMFRARIYAQGFTVAAMVAGSMYWQTDRQKQKELQKIIDE 101
                 67899***********************9999********86 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1       2.1   7.4e+03      42      52 ..      20      30 ..      17      32 .. 0.51
   2 ?    9.4   5.9   0.00024      0.86      28      66 ..      90     132 ..      76     136 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 2.1
                HHHHHHCC-XX CS
       DivIC 42 eLeaevkdLks 52
                +L++  ++Lk+
  KHJ32326.1 20 RLQKLMRRLKQ 30
                55555555544 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00024
                 HHHHHHHHHHHHHHHHHHHHCC-XX....XXXXXXXXXXXXXX CS
       DivIC  28 alqaelaklkaeneeLeaevkdLks....dedyieerARselg 66 
                 ++q+el+k+ +e+++ e++ + L+     d+++ ee+AR++  
  KHJ32326.1  90 QKQKELQKIIDERKAQEKRARWLEEldyrDREAKEEQARKDAA 132
                 67888899999999999988888658889**********9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1383  (0.0771376); expected 358.6 (0.02)
Passed bias filter:                      564  (0.0314574); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1395.17
//
Query:       KHJ32327.1  [L=612]
Description: putative tldc domain containing protein 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-26   93.2   0.5    3.1e-26   92.3   0.5    1.5  1  TLD       TLD
      6e-11   43.2   1.6    2.3e-10   41.3   1.6    2.1  1  DUF1773   Domain of unknown function
    0.00067   20.2   0.0     0.0017   18.9   0.0    1.6  1  Corona_7  Coronavirus protein 7


Domain annotation for each model (and alignments):
>> TLD  TLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.3   0.5   5.2e-30   3.1e-26       1     139 []     360     557 ..     360     557 .. 0.93

  Alignments for each domain:
  == domain 1  score: 92.3 bits;  conditional E-value: 5.2e-30
         TLD   1 llyssskdgsslstllekie.nkgptllli..............................kdekkyifGaflsqpwkssnkkfygdsesflfslspkfk 68 
                 lly  s dg+sl ++  ++  +++pt+ll+                              k+++  +fG++l++ w++s +k++g+ e++lf+l+p ++
  KHJ32327.1 360 LLYMGSDDGFSLGSFATCVFnWRAPTILLVygtrisdpplrrqeclfvetlppkrfpnssKSNR-LVFGVYLTEYWRQSYQKCFGNFETILFQLEPVHE 457
                 689999************99899***********************************955555.********************************** PP

         TLD  69 vykstgknkaylntss.....dglgfGggqp..................kfsLwidsslekgtsrhs.....etfengllsg.aseerfkikdiEVWgl 138
                 v++++  n+ y+  ++     +g+++G++ +                  ++sL +dss+e+g+++h+     ++f+n++ ++ ++++rf+++ +EVWg+
  KHJ32327.1 458 VFNASLINNDYIAFNKrntgyQGITIGCSYQksqknrqisghsmdvdlgAVSLLLDSSFEFGVFNHDytsggGAFHNSQTRKfDWQDRFEVESLEVWGC 556
                 ****7777777666665555555*****9999******************************************************************9 PP

         TLD 139 g 139
                 g
  KHJ32327.1 557 G 557
                 6 PP

>> DUF1773  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.3   1.6   3.9e-14   2.3e-10       1      57 [.     300     351 ..     300     351 .. 0.72

  Alignments for each domain:
  == domain 1  score: 41.3 bits;  conditional E-value: 3.9e-14
     DUF1773   1 hflfsknldfskrks..gysassvpflngeepedeePLLpdigsilDinvLSQlsfFLp 57 
                 hflfskn+df+kr++  +++++  p+ ++++     PL  ++ +ilD+n+LSQlsfFLp
  KHJ32327.1 300 HFLFSKNIDFTKRSNviTHPSTAYPDRDVDQ-----PL--QSSDILDLNILSQLSFFLP 351
                 9*************41123333333333333.....44..6789**************8 PP

>> Corona_7  Coronavirus protein 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   2.8e-07    0.0017       6      70 ..     280     346 ..     275     377 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 2.8e-07
    Corona_7   6 havlvtalillligriqllerlllshllnlttvsnvlgvpdsslrv.nclq.llkpdcldfnilhkv 70 
                  +v+ t+l ll+ g i l+e++l+s+ +++t  snv+  p ++    ++ q l   d ld+nil ++
  KHJ32327.1 280 ETVISTSLPLLFKGFIPLFEHFLFSKNIDFTKRSNVITHPSTAYPDrDVDQpLQSSDILDLNILSQL 346
                 67999***********************************9987541444526678********876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (612 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4322.24
//
Query:       KHJ32328.1  [L=113]
Description: hypothetical protein EV44_g4208 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       201  (0.0112109); expected 358.6 (0.02)
Passed bias filter:                      177  (0.00987227); expected 358.6 (0.02)
Passed Vit filter:                         6  (0.000334653); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.26s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 855.09
//
Query:       KHJ32329.1  [L=973]
Description: putative duf1620 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-75  253.3   0.0    4.4e-75  252.0   0.0    1.7  1  EMC1_C    ER membrane protein complex subunit 1, C-terminal
    3.4e-18   66.1   0.0    3.1e-13   49.9   0.0    2.7  2  PQQ_2     PQQ-like domain
    3.5e-05   23.5   0.2         10    6.3   0.0    5.2  4  PQQ       PQQ enzyme repeat


Domain annotation for each model (and alignments):
>> EMC1_C  ER membrane protein complex subunit 1, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  252.0   0.0   7.4e-79   4.4e-75       1     213 []     740     970 ..     740     970 .. 0.97

  Alignments for each domain:
  == domain 1  score: 252.0 bits;  conditional E-value: 7.4e-79
      EMC1_C   1 sEnwivysyfne.........kkkrqeivvveLyeskesnereklssaanssslea.......velpevlsqsfifpegikalavttTkkgItsksll. 82 
                 +Enw++ys +++         ++k+++ivv eL+esk +n+r++l+ a+++ssle+       + lp v+sqsfi+pe+i++++vt+T++gIts++l+ 
  KHJ32329.1 740 TENWFAYSLWSDvnpdssrpnSSKGYQIVVSELFESKFPNDRGPLGPAEKFSSLEPsdepnsqPVLPYVISQSFIIPEPINHMKVTQTRQGITSRQLVc 838
                 59****************************************************9999999999999*******************************9 PP

      EMC1_C  83 lalesgqivslprrlldpRrpvrkptaae.keeglipYepllpidpksvishkrevagvkkiltaptllEStslvlafGlDlfltrvaPsksFDlLskd 180
                 ++++s++i+++p   ldpRrpv +pt++  +eegl++Y+pl++++p ++i+h+revagvk i+t+ptllEStslv+a+G+D+f+trv+Ps  FD+L+++
  KHJ32329.1 839 TLYRSNAIIGIPYVQLDPRRPVGRPTTSLeAEEGLFQYQPLIDFHPSMIITHEREVAGVKGIITSPTLLESTSLVFAYGIDIFGTRVTPSLPFDILGNS 937
                 9*********************6666654288******************************************************************* PP

      EMC1_C 181 FnkilLiltvvallvlvlvlrplvkrkklnkrW 213
                 Fnk++L++t++al+++vl+l+p++krk++nk W
  KHJ32329.1 938 FNKMSLVATILALAIGVLILAPIAKRKQINKIW 970
                 *******************************99 PP

>> PQQ_2  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   0.0   5.2e-17   3.1e-13       4     231 ..      66     320 ..      63     326 .. 0.78
   2 !   13.3   0.0   7.7e-06     0.046       3      69 ..     516     588 ..     514     602 .. 0.76

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 5.2e-17
       PQQ_2   4 vvsaldaatGaelWrv..dlarplgggvsravlsggtlfvatgggrlvaldaatGkvlWettlegpvvga.........plvaegrvvvvasdg.qlia 90 
                 v+ a+++ tG+++Wr+  d   +   g+ r v +++ ++++  ggr+ +++a +G  +W+++++g ++            ++    v+++ +++ +l  
  KHJ32329.1  66 VIGAINPGTGKLVWRQiiDN--QDEKGFIRSVDEEDAIITG-VGGRVDCWNAMNGIMKWNVEFPGVIRDLqviktitneKTIQKILVLLEEEEKtVLKL 161
                 789*************6654..4444444699777777775.*********************996555488865555555555555666666656666 PP

       PQQ_2  91 ldaedGkrlWstqqrseepae..lrssaspavagdtvvvges....sgklvaldpkdGkvlWerel.aaprgtsels.rvgdisgrpvva.......eg 174
                 l  ++G++ W   +++ ++ +  + +++ +++    v + ++    + +++ +d+++Gk++ e  + ++++ +s+ + +v+ ++++  +        ++
  KHJ32329.1 162 LQCDSGDLIWD-LRENNSDIPfrINGNSNDIFL---VSLLGAknnfNIRVTTIDLENGKKRNEFMItSKAEISSSDDvFVNTVNSAIPMLawidkatKN 256
                 7899*******.555557777669999999999...77777767799999****************999998887778777766665444699887655 PP

       PQQ_2 175 .tVyassgqgrllal.dlatgrrlwske.issinglpildgdllyvvsa....gelialdratG 231
                   V++ +  g +     +++++   +k  i+++n +  ++++l+y++s+    +e++++d ++G
  KHJ32329.1 257 iIVNILTRAGPVSNKlPIEQTDSINKKViIHAPNIFESQPHFLVYLESEksnkAEVYHVDTNSG 320
                 8777777777666556999999666777899*****************55***********999 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 7.7e-06
       PQQ_2   3 gvvsaldaa.tGaelWrvdl.arp......lgggvsravlsggtlfvatgggrlvaldaatGkvlWettlegpvv 69 
                 g ++al+ +  G+++W+++  +r+        g+   a  ++gtl+v + +g++  ld +tGk++ ++++e+p+ 
  KHJ32329.1 516 GNIYALESNkKGSIVWSLKAfERSisykwnVKGMW--ADSAKGTLYVYGAYGEFLVLDYTTGKIIEKFEPEKPLS 588
                 78999999559*******66566344444344444..5559***********************99999988864 PP

>> PQQ  PQQ enzyme repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.015        87       4      26 ..      59      81 ..      56      87 .. 0.77
   2 ?    1.1   0.0     0.075   4.5e+02      11      28 ..     206     223 ..     202     230 .. 0.83
   3 !    5.6   0.0    0.0028        17       2      25 ..     507     532 ..     506     535 .. 0.82
   4 !    6.3   0.0    0.0017        10      10      29 ..     565     584 ..     556     591 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.015
                EEEETTSEEEEEETTTCCEEEEE CS
         PQQ  4 ylgsadGylyAlDadTGkvlWrf 26
                y  s+ +++ A++  TGk++Wr 
  KHJ32329.1 59 YTLSDLNVIGAINPGTGKLVWRQ 81
                555777777788889******97 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.075
                 EEEEEETTTCCEEEEEES CS
         PQQ  11 ylyAlDadTGkvlWrfkt 28 
                 ++  +D+++Gk++ +f +
  KHJ32329.1 206 RVTTIDLENGKKRNEFMI 223
                 7899*******9877765 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.0028
                 EEEEE.ETTSEEEEEETTT.CCEEEE CS
         PQQ   2 vvylg.sadGylyAlDadT.GkvlWr 25 
                 +++l  +  G++yAl  +  G ++W+
  KHJ32329.1 507 KIVLLaTLRGNIYALESNKkGSIVWS 532
                 677777*********98888888887 PP

  == domain 4  score: 6.3 bits;  conditional E-value: 0.0017
                 SEEEEEETTTCCEEEEEESS CS
         PQQ  10 GylyAlDadTGkvlWrfktg 29 
                 G ++ lD +TGk++ +f+++
  KHJ32329.1 565 GEFLVLDYTTGKIIEKFEPE 584
                 78999************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (973 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       460  (0.0256568); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.25s 00:00:00.97 Elapsed: 00:00:00.42
# Mc/sec: 6923.63
//
Query:       KHJ32330.1  [L=104]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1092  (0.0609069); expected 358.6 (0.02)
Passed bias filter:                      662  (0.0369234); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 796.12
//
Query:       KHJ32331.1  [L=441]
Description: hypothetical protein EV44_g1906 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.6e-05   24.9   6.9     0.0047   17.7   0.0    5.1  4  WD40         WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.042   14.1   0.0       0.49   10.7   0.0    2.7  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.23     2e+03      16      36 ..      91     111 ..      81     113 .. 0.57
   2 !    4.2   0.4    0.0099        89      18      35 ..     190     215 ..     124     216 .. 0.80
   3 !   17.7   0.0   5.2e-07    0.0047       7      37 ..     255     292 ..     248     293 .. 0.77
   4 ?    0.7   0.1      0.13   1.1e+03      22      37 ..     404     421 ..     396     422 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.23
                 EEEETTSSEEE.EEETTSEEEE CS
        WD40  16 lafspdgawla.sGsdDgtvri 36 
                 l f   ++ la ++s  gt+ i
  KHJ32331.1  91 LHFYNGHNTLAvASS-TGTISI 111
                 444444444441344.777766 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0099
                 EETTSSE........EEEEETTSEEE CS
        WD40  18 fspdgaw........lasGsdDgtvr 35 
                  ++d+aw        l+sG+dD  +r
  KHJ32331.1 190 IHDDNAWtctaaskiLLSGGDDSMLR 215
                 57777777777777778999998887 PP

  == domain 3  score: 17.7 bits;  conditional E-value: 5.2e-07
                 EESS.SSEEEEE......EETTSSEEEEEETTSEEEEE CS
        WD40   7 ltGH.ssvtsla......fspdgawlasGsdDgtvriW 37 
                 l+GH  +vt++       +  d +++++Gs+D +vri+
  KHJ32331.1 255 LEGHnAGVTAIIflpspsTFNDDSFILTGSYDDHVRIF 292
                 78**666*****666666666666689**********8 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.13
                 SSE.EEEEE.TTSEEEEE CS
        WD40  22 gaw.lasGs.dDgtvriW 37 
                 ++w +as+s +D+ + +W
  KHJ32331.1 404 KTWtVASSSfYDKLLVLW 421
                 56756666557******* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   5.4e-05      0.49      16      81 ..      63     128 ..      59     144 .. 0.77
   2 ?    0.8   0.0      0.07   6.2e+02      24      56 ..     121     153 ..     116     171 .. 0.79
   3 ?   -2.1   0.0      0.57   5.1e+03      49      69 ..     276     296 ..     274     299 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 5.4e-05
  ANAPC4_WD40  16 dgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  +g+l++f ++ +++  + +    s + +L++ +  + Lava s g++++++  +   +  l+  ++
   KHJ32331.1  63 EGSLILFKISNKELTLIRTIPYPSAILDLHFYNGHNTLAVASSTGTISIFHLVKRAEILDLQLVAT 128
                  677888888888888887777889999************************887766666555444 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.07
  ANAPC4_WD40  24 lngqrvwtleedkedsevrsLaWkpdgklLava 56 
                  l+ q v t + +++d  v sLaW p  + L  +
   KHJ32331.1 121 LDLQLVATHQVAHKDILVLSLAWYPYTNALQTG 153
                  5667888888889999999****9988887665 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.57
  ANAPC4_WD40  49 dgklLavaysdgevrlldaes 69 
                  d++++  +  d +vr++++  
   KHJ32331.1 276 DDSFILTGSYDDHVRIFKSTA 296
                  7889999999******99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       283  (0.0157845); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 3160.76
//
Query:       KHJ32332.1  [L=566]
Description: putative protein phosphatase type 1 complex subunit hex2 reg1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.5e-09   35.1   4.9    2.1e-08   33.8   4.1    2.2  2  DUF1752   Fungal protein of unknown function (DUF1752)


Domain annotation for each model (and alignments):
>> DUF1752  Fungal protein of unknown function (DUF1752)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   4.1   1.2e-12   2.1e-08       1      27 [.     161     187 ..     161     188 .. 0.96
   2 ?   -1.9   0.0      0.18   3.2e+03       4      15 ..     302     313 ..     301     314 .. 0.87

  Alignments for each domain:
  == domain 1  score: 33.8 bits;  conditional E-value: 1.2e-12
     DUF1752   1 lWkyytkkkkdlpngeRLENlSWRlWn 27 
                 +Wk++++ +k+++n+ RLEN+SWR W 
  KHJ32332.1 161 SWKHVVSRRKSYSNAPRLENASWRSWV 187
                 8*************************5 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.18
     DUF1752   4 yytkkkkdlpng 15 
                 +++++++dl +g
  KHJ32332.1 302 VLSTCSSDLNHG 313
                 789******987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 4226.12
//
Query:       KHJ32333.1  [L=396]
Description: putative mitochondrial enoyl reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.7e-13   50.0   0.0    4.3e-13   49.4   0.0    1.3  1  ADH_zinc_N    Zinc-binding dehydrogenase
     0.0057   17.7   0.0     0.0097   17.0   0.0    1.4  1  ADH_zinc_N_2  Zinc-binding dehydrogenase
     0.0099   15.8   0.0       0.02   14.8   0.0    1.5  1  ADH_N         Alcohol dehydrogenase GroES-like domain
  ------ inclusion threshold ------
      0.087   12.9   0.1       0.18   11.9   0.1    1.4  1  BACK          BTB And C-terminal Kelch


Domain annotation for each model (and alignments):
>> ADH_zinc_N  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4   0.0   9.6e-17   4.3e-13       1     117 [.     202     334 ..     202     347 .. 0.79

  Alignments for each domain:
  == domain 1  score: 49.4 bits;  conditional E-value: 9.6e-17
                 HHHHHHHHHHHHTT-.EEEEEESSHHHH......HHHHHTTESEEEETTTC.H..HHHHHHHHT..TTSSEEEEEESSCSHHHHHHHHHCEEEEEEEEE CS
  ADH_zinc_N   1 gvGlaavqlAkalGa.eviavdsseekl......elakklGadevinykea.d..lverikelt..ggegvdvvfecvGsgatleaalkllkpgGrlvv 87 
                 gvG  a+ql k +G   + ++   ++ +      + + +lGa++v+++ke  d    +ri  l   g+e +++ ++cvG g++ +a +k+l ++G lv+
  KHJ32333.1 202 GVGRVAIQLGKLWGLrSINVIRERPDSAsteilrKELLDLGATHVLTEKELmDrnSHDRIMNLNdnGKEIIKLGLNCVG-GKATTALVKCLGKDGHLVT 299
                 8**************6444455555544555555888889********87777335556666666557889999*****.******************* PP

                 CSC.TSSEEEEEHHHHHHTT-EEEEE-SSC....H CS
  ADH_zinc_N  88 vGg.gkgeeefdlrnlllkeksilGsllgs....l 117
                 +Gg +  + e+++++l++ ++++ G+++++     
  KHJ32333.1 300 YGGmSRRPIELPTGRLIFDDLRFSGFWVSRwaaeN 334
                 ***8888888*******************944443 PP

>> ADH_zinc_N_2  Zinc-binding dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   2.2e-06    0.0097       1     103 [.     241     355 ..     241     364 .. 0.66

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 2.2e-06
                   TT-SEEEETT.STTHH........HHH-TT-EEEEEES-HHHHH.HHHHHHE.EEEEEEEE----.S-EEE-CHHHCTTT-EEEE--GGG...-... CS
  ADH_zinc_N_2   1 lGAdevidyr.tedfe........aatggegvDvvldtvggealleaslkvl.pggGrlvsiggpplsaallkpakkrkgrsvkyeflfsmkas... 84 
                   lGA++v+  +   d          ++ g+e + + l++vgg+a+ +a++k+l ++ G+lv++gg   ++ +  p+ +     ++++ +   ++    
    KHJ32333.1 241 LGATHVLTEKeLMDRNshdrimnlNDNGKEIIKLGLNCVGGKAT-TALVKCLgKD-GHLVTYGGM-SRRPIELPTGRLIFDDLRFSGFWV-SRWaae 333
                   67777774443333334555667644455668899*********.*******777.*******73.344444444445555555555553.222366 PP

                   ....-HHHHHHHHHHHHHHH-- CS
  ADH_zinc_N_2  85 ...aqadileelaalieeGklr 103
                      +++++l+e+++li  G lr
    KHJ32333.1 334 npeEKKRMLDEILNLIRIGLLR 355
                   6786777799999999888877 PP

>> ADH_N  Alcohol dehydrogenase GroES-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   4.5e-06      0.02       2      63 ..      68     138 ..      67     155 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 4.5e-06
                 TEEEEEEEEEEE-HHHHHHHTTS........TTTTSSSS.EE---EEEEEEEEESTT-CS--TT-EEEE-S CS
       ADH_N   2 gevlikvkaagiCgsDlhilkgg........kelevklp.lilGHEivGeveevgpevkklkvGdrVvvep 63 
                 + +l+k+ a+ i+  D+  ++g+        + l + lp  + G E + ev +vg+ vk+++ Gd Vv++ 
  KHJ32333.1  68 NSILLKTLASPINPADINQIQGTypsrpsftSLLGTTLPsAVAGNEGCFEVTSVGSLVKTVSQGDWVVMKS 138
                 789999999************9988877777555566665789*************************964 PP

>> BACK  BTB And C-terminal Kelch
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1     4e-05      0.18      66      95 ..     327     356 ..     325     362 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4e-05
        BACK  66 vlkWvkhdeeerkkhlpelLekvRlpllsp 95 
                 v +W  +++ee+k++l e+L+ +R+ ll++
  KHJ32333.1 327 VSRWAAENPEEKKRMLDEILNLIRIGLLRD 356
                 789************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       376  (0.0209716); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.20s 00:00:00.67 Elapsed: 00:00:00.36
# Mc/sec: 3290.46
//
Query:       KHJ32334.1  [L=520]
Description: putative ubiquitin-protein ligase molybdopterin-converting factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.9e-42  143.3   0.0    1.3e-41  142.6   0.0    1.2  1  ThiF             ThiF family
     0.0007   19.9   1.3      0.011   15.9   1.3    2.5  1  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
      0.003   17.8   0.1     0.0085   16.3   0.1    1.8  1  TrkA_N           TrkA-N domain
  ------ inclusion threshold ------
      0.014   15.0   0.1      0.028   14.0   0.1    1.5  1  UDPG_MGDP_dh_N   UDP-glucose/GDP-mannose dehydrogenase family
      0.022   14.9   0.1      0.094   12.8   0.1    2.0  2  Ldh_1_N          lactate/malate dehydrogenase, NAD binding do
      0.045   13.4   0.2       0.09   12.4   0.2    1.5  1  ApbA             Ketopantoate reductase PanE/ApbA
      0.071   12.1   0.0       0.11   11.5   0.0    1.2  1  L_lactis_ph-MCP  Lactococcus lactis bacteriophage major capsi
      0.085   12.0   0.0       0.17   11.0   0.0    1.5  1  Melibiase_2      Alpha galactosidase A
       0.16   11.5   0.4       0.29   10.7   0.4    1.3  1  DAO              FAD dependent oxidoreductase


Domain annotation for each model (and alignments):
>> ThiF  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.6   0.0   6.5e-45   1.3e-41       2     234 ..     116     391 ..     114     400 .. 0.85

  Alignments for each domain:
  == domain 1  score: 142.6 bits;  conditional E-value: 6.5e-45
                 HHHHHHHHHHHHHHHHTSEEEEE--SHHHHHHHHHHHHHTTTEEEEEESSB--GGGGGTBTTS-GGGTTSBHHHHHHHHHHHT-TTSEEEEEES-CCGC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF   2 srqlallgedgqekLrdskvllvGaGglGsellknLalsGvgkltlvDnDkielsNlnRqflfreediGkpKaevaaealqeinpdveveavteritde 100
                 +r++++l +dg++kLr++ + +vG+Gg+Gs ++++La+sGv +++l+D+D++ ls lnR+  ++ +d+G pK++++ ++l++i+p+++    +e   +e
  KHJ32334.1 116 ARNRVFLTDDGLKKLRSAFIIIVGCGGVGSHCATALARSGVARIRLIDFDQVTLSSLNRHAVATLADVGIPKVTCLMKRLHQIAPWINFDLRNELYRSE 214
                 578877888********************************************************************************9999999887 PP

                 CS-HHHHTT-.....SEEEEESSSHHHHHHHHHHHHHHT-EEEEEEEETTEEEEEEEEE......CCS-ECTSS-.........T.....GGS.EECCC CS
                 xxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxx.........x.....xxxxxxxxx RF
        ThiF 101 tvleellesv.....DlVvdalDniearrlvnracvkkgiplieagtlgfegqvvviip......gktgcyeCld.........p.....sstedptek 174
                   + +lle+      D++vda+Dni++++ + ++c+++++++i+++ +g++++ + i+        +++  + ++         +     +s+e+p+++
  KHJ32334.1 215 V-SSNLLEDWngkkpDFIVDAIDNIDCKVSLLKYCYENQLKVISSMGAGAKSDPTRIFVgdistsTDDPLSRATRrrlraagvaTgitvvFSSEKPSPE 312
                 4.6788888888888******************************************532233445566666666666665555055567899999999 PP

                 CEEHHH...........HHHCT...........E-B-HHHHHHHHHHHHHHHHHHHTTBCGGGCCEEEECCTTTTEEEEECC CS
                 xxxxxx...........xxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 175 kvplct...........siagn...........ipaiatttavvaglaalellkllsgkeklenslltqvdllesrfenvel 234
                 k+ l+            +   +           +p+++t++av++  +a++++  + g ++   ++ t+++++es++ +++ 
  KHJ32334.1 313 KARLLPlpeeefikgsiG---ElgvlpdfrvriMPVLGTLPAVFGYTVANHIILQITGYPTDYITTKTRNKMYESIHAQLQG 391
                 999998999*98886552...3455666777779*******************99999988888888899999999888776 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   1.3   5.7e-06     0.011       1      97 [.     135     256 ..     135     303 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 5.7e-06
                      EEEE--SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHH.........................TTTCEEEEE--TTTHHHHHHHHHTT CS
  Sacchrp_dh_NADP   1 vliiGaGsvGqavaellarhfdvdaeitvadrskeklealaaka.........................lgvrfeaialdaenyeavLaallke 69 
                      ++i+G+G+vG+  a  lar++    +i ++d+++  l  l  +a                          ++++ ++    e  + +L+    +
       KHJ32334.1 135 IIIVGCGGVGSHCATALARSGVA--RIRLIDFDQVTLSSLNRHAvatladvgipkvtclmkrlhqiapwINFDLRNELYRSEVSSNLLEDWNGK 226
                      89******************988..9******99999999888899999999******999998777666666666666666666666666555 PP

                      S.SEEEE-SSGG.GHHHHHHHHHHHT-EEE CS
  Sacchrp_dh_NADP  70 g.dlvvnlsppi.ssldvlkaCietgvhyv 97 
                      + d++v+++ +i +  ++lk+C+e++  ++
       KHJ32334.1 227 KpDFIVDAIDNIdCKVSLLKYCYENQLKVI 256
                      58**********99999*****99998777 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   4.3e-06    0.0085       1      42 [.     135     177 ..     135     185 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 4.3e-06
                 EEEES-SHHHHHHHHHHHH.TTEEEEEEESSHHHHHHHHHTTS CS
      TrkA_N   1 iiiiGlGrvGrslaeeLse.ggkdvvvidkdeerveelreegl 42 
                 iii+G+G vG++ a  L + g  ++ +id d+ ++ +l ++ +
  KHJ32334.1 135 IIIVGCGGVGSHCATALARsGVARIRLIDFDQVTLSSLNRHAV 177
                 8******************55577*********9999988875 PP

>> UDPG_MGDP_dh_N  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   1.4e-05     0.028       3      44 ..     135     177 ..     133     197 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.4e-05
                     EEEE--STTHHHHHHHHHHCT.SEEEEE-S-HHHHHHHCTTS- CS
  UDPG_MGDP_dh_N   3 isviGlGYvGlvtaavlaeig.hevigvDideekvdklnsgki 44 
                     i ++G G vG  +a++la+ g   + ++D d+ + ++ln+  +
      KHJ32334.1 135 IIIVGCGGVGSHCATALARSGvARIRLIDFDQVTLSSLNRHAV 177
                     789******************77899*************9865 PP

>> Ldh_1_N  lactate/malate dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.2   2.4e+03      43      83 ..      49      87 ..      21     101 .. 0.70
   2 ?   12.8   0.1   4.7e-05     0.094       3      37 ..     135     167 ..     133     183 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.2
                HHHHHHCHCCSTS-EEEEESSGGGGTTESEEEE--S-SS-T CS
     Ldh_1_N 43 aldlshistflsvkvkvsekeeealkdadvvvitagvprkp 83
                a dl + ++ l  + ++ +++ + +k+++  vi a  pr  
  KHJ32334.1 49 AWDLIDKKVCL--SNQTHANKISLTKEVKSSVISATEPRSG 87
                56666666666..3344456777888888889999988864 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 4.7e-05
                 EEEETTTSHHHHHHHHHHHHTTSSSEEEEE-SSHH CS
     Ldh_1_N   3 vavvGaaGgiGqslalllankkladelaLlDiake 37 
                 +++vG  Gg+G+++a++la +++a+ ++L+D+++ 
  KHJ32334.1 135 IIIVGC-GGVGSHCATALARSGVAR-IRLIDFDQV 167
                 78****.*****************9.*****9875 PP

>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   4.5e-05      0.09       1      39 [.     135     175 ..     135     189 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.5e-05
                 EEEES-SHHHHHHHHHHHHHTHC.EEEE-SCH.HHHHHHHH CS
        ApbA   1 iailGaGaiGsllaakLakagad.vtlilrsr.rlealkkn 39 
                 i i+G+G++Gs +a  La+ g   + li+ ++  l +l+++
  KHJ32334.1 135 IIIVGCGGVGSHCATALARSGVArIRLIDFDQvTLSSLNRH 175
                 89*****************5555499998888777777766 PP

>> L_lactis_ph-MCP  Lactococcus lactis bacteriophage major capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   5.5e-05      0.11     249     328 ..     440     514 ..     430     518 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 5.5e-05
  L_lactis_ph-MCP 249 aelrkakgtdghsrfnelatkeqiaqsfgavnletrvwmpkdevavynhdeyvligdlnvenyndfdlrynveqwlsetl 328
                      a +r  k  dg s++ + +      q f ++ l   v m k+e av+  d  +lig+  +e+  d      veq + e l
       KHJ32334.1 440 ALVRWRKPIDGGSKIVNRTVPG---QIFSTLSLTDLVCMTKEEAAVHTRD--ILIGNKTLEDLYDHSTITYVEQMIEEEL 514
                      5567777888888876666555...55889999999**********7776..9**********99999999***999876 PP

>> Melibiase_2  Alpha galactosidase A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   8.7e-05      0.17     193     243 ..     233     283 ..     218     301 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 8.7e-05
                  ---SSHHHHHHHHHHHHHTHHHHTTT-BTTBEEE---B-TTSSSS-HHHHH CS
  Melibiase_2 193 diqdswdsvkeivdyfaenqdvlvevagpgkwndpdmliignfglsldqqr 243
                  d  d+ d   ++++y  enq ++++  g g   dp  + +g+ + s+d+  
   KHJ32334.1 233 DAIDNIDCKVSLLKYCYENQLKVISSMGAGAKSDPTRIFVGDISTSTDDPL 283
                  666788888999**********************************99865 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.4   0.00015      0.29       2      27 ..     135     163 ..     135     176 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00015
                 EEEECTSHHHHHHHHHHHHTT...EEEEE CS
         DAO   2 vviiGGGiiGlstAyeLarrg...Vtlle 27 
                 ++i+G G +G+ +A +Lar g   + l++
  KHJ32334.1 135 IIIVGCGGVGSHCATALARSGvarIRLID 163
                 89****************99977766666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       718  (0.0400469); expected 358.6 (0.02)
Passed bias filter:                      606  (0.0338); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.37
# Mc/sec: 4211.26
//
Query:       KHJ32335.1  [L=666]
Description: putative triacylglycerol lipase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-22   80.3   0.2    3.6e-22   79.3   0.2    1.5  1  Abhydrolase_1   alpha/beta hydrolase fold
    1.6e-21   75.6   0.2    3.1e-21   74.7   0.2    1.5  1  Abhydro_lipase  Partial alpha/beta-hydrolase lipase region
      0.001   18.4   0.0        0.3   10.3   0.0    2.2  2  Hydrolase_4     Serine aminopeptidase, S33
  ------ inclusion threshold ------
       0.21   11.1   0.0          5    6.6   0.0    2.2  2  DLH             Dienelactone hydrolase family


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.3   0.2     8e-26   3.6e-22       1     255 [.     132     428 ..     132     430 .. 0.95

  Alignments for each domain:
  == domain 1  score: 79.3 bits;  conditional E-value: 8e-26
                    SEEEEE-STTTCGGGGTTG.HHHHHHHHT....TSEEEEEEETTSTTSSSTTTGB...........CHHSHHHHHHHHHHHHHHCTTSSEEEEEET CS
  Abhydrolase_1   1 pvlvilhGlpgssdvwaer.glapaLakd....gfdvillDlrGvgySspapacin..........ddygtasvaddldrildalgddkltlvGhS 81 
                    +v+ ++hGl+++s+vw ++ + ++ L+++    g+dv+l + rG+ yS++ ++  +          d++ + ++ d +++il+ + +++l ++G+S
     KHJ32335.1 132 NVVYLHHGLLMCSEVWVCLtDEQRCLPFRlveqGYDVWLGNNRGNKYSKKNLNLSPnkipfwefcmDQFAFHDIPDTIQYILETTSVKSLSYIGFS 227
                    699*************9953478889999***********************98889*************************************** PP

                    HHHHHHHHHHHHH...GGGEEEEEEESE.CSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHH....HCHHHC CS
  Abhydrolase_1  82 mGGmialayaaey...perVkalvllga.idpaaslieaqrqqaksfpdffdgyaadcarnpagplladelaaleqrhrlvdalkf....pdkskr 169
                    +G+++a+a +a +   ++ V+ ++ l++ ++pa   ++  +  +k  p  +   +      ++ + +++ l    ++ ++  a+kf    +  + +
     KHJ32335.1 228 QGTAQAFASLAVNpklNQQVNVFIGLAPaMSPAGLSNRIVDALIKASPQVLFLLFGRRSILSSTTTWQSILYPPIFCRAIDLAIKFlfgwKTLNIS 323
                    *************9**9*************************************************************************999999 PP

                    CHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHC.....................THHHHSEEEEEEETTCSSSCH.HHHHHHHHCHTSEEEE CS
  Abhydrolase_1 170 fpssgsdnasslatgalksieqwpttdsaklllrlre.....................lknvlaptlvisgtsDplvpp.kaledlaqllpkkrlv 243
                      ++  ++ +  ++++ ks+ +w +  + k++++++                       +n+++p+++++g  D lv++ ++l++l +++     +
     KHJ32335.1 324 SSQKLAAYHHLYSFTSTKSVVHWFQVIRTKSFQMYDDdqskilslrtsdrfskvakfpTRNIKSPIYLLYGGCDSLVDInDMLRELPSHTVA---I 416
                    999999*******************999999999999999******************9***************************988555...8 PP

                    EEETCSSSHHHH CS
  Abhydrolase_1 244 visdagHlafle 255
                    +i++++Hl+fl+
     KHJ32335.1 417 QIPHYEHLDFLW 428
                    899999999887 PP

>> Abhydro_lipase  Partial alpha/beta-hydrolase lipase region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.7   0.2   6.9e-25   3.1e-21       1      62 [.      82     149 ..      82     151 .. 0.95

  Alignments for each domain:
  == domain 1  score: 74.7 bits;  conditional E-value: 6.9e-25
  Abhydro_lipase   1 vseiirkhGypveeheVqTeDGYiLtlhRipaknk......svssklekkpvVlLqHGLlasSevwvl 62 
                     +++++  +Gy veeh VqTeDGY+L++hR+  k+       ++  k ++k+vV+L+HGLl++Sevwv+
      KHJ32335.1  82 FVDLCALFGYYVEEHLVQTEDGYMLGIHRLAWKKGekehpvNHGMKGTRKNVVYLHHGLLMCSEVWVC 149
                     6799**************************9999899****9999**********************8 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   6.8e-05       0.3      25     122 ..     159     266 ..     128     302 .. 0.72
   2 !    6.0   0.0    0.0014       6.3     183     222 ..     378     414 ..     322     424 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 6.8e-05
  Hydrolase_4  25 eaLaaqGfavyalDhrGhGrse.........gkrghvpsfddyvdDlaafvekvkeehpelplfllGhSmGGliallyllrypd...kvaglilsaPa 110
                   +L++qG++v+  ++rG   s+            +++   +    D+   ++ + e+ + + l  +G S G + a++ l+ +p+   +v+ +i  aPa
   KHJ32335.1 159 FRLVEQGYDVWLGNNRGNKYSKknlnlspnkIPFWEFCMDQFAFHDIPDTIQYILETTSVKSLSYIGFSQGTAQAFASLAVNPKlnqQVNVFIGLAPA 256
                  479*****************999998775322222333334556789999999************************9977777666999******** PP

  Hydrolase_4 111 lkikaklkappl 122
                  ++++     +++
   KHJ32335.1 257 MSPAGLS--NRI 266
                  9987543..333 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0014
  Hydrolase_4 183 leeraakitlPllllhGeaDkvvdpeasrelyerlgskdk 222
                  ++  + +i+ P+ ll+G+ D +vd     +++++l+s  +
   KHJ32335.1 378 AKFPTRNIKSPIYLLYGGCDSLVD---INDMLRELPSHTV 414
                  555678999***************...5566777776444 PP

>> DLH  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.029   1.3e+02      80     127 ..     203     248 ..     145     271 .. 0.84
   2 ?    6.6   0.0    0.0011         5     140     183 ..     382     422 ..     376     427 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.029
         DLH  80 ddlkaavaylksvpevstkkvgvvGfCmGGalalllaaevpevdaava 127
                 +d+ ++++y+ ++   s+k +  +Gf  G a a+++ a +p+++  v 
  KHJ32335.1 203 HDIPDTIQYILETT--SVKSLSYIGFSQGTAQAFASLAVNPKLNQQVN 248
                 56678888888887..789****************9999988887664 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0011
         DLH 140 aakikapilalfgeeDefipadevekleealkaanvdlelkvYp 183
                 +++ik pi+ l+g+ D  ++ ++   +  +l  + v++++  Y+
  KHJ32335.1 382 TRNIKSPIYLLYGGCDSLVDIND---MLRELPSHTVAIQIPHYE 422
                 679****************9885...566666777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (666 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4699.24
//
Query:       KHJ32336.1  [L=124]
Description: putative cytochrome c oxidase assembly protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-28   97.2   2.7    6.3e-28   96.9   2.7    1.1  1  Pet191_N  Cytochrome c oxidase assembly protein PET191
  ------ inclusion threshold ------
      0.065   13.1   0.4       0.13   12.1   0.4    1.5  1  PAN_3     PAN-like domain
       0.22   11.4   1.2       0.28   11.0   1.2    1.2  1  COBRA     COBRA-like protein


Domain annotation for each model (and alignments):
>> Pet191_N  Cytochrome c oxidase assembly protein PET191
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.9   2.7   1.1e-31   6.3e-28       2      67 .]       3      69 ..       2      69 .. 0.98

  Alignments for each domain:
  == domain 1  score: 96.9 bits;  conditional E-value: 1.1e-31
    Pet191_N  2 ksCkdlrealaeClqksdCvkkerktpkeClkek.aeelpeeCkqlrkayfeCkrgllDmrkRfrGn 67
                +sC+d+r+ala+Clq+sdCv ++r++p++Cl+ +  e+lp++C+ql+k y +Ckrg++DmrkRfrGn
  KHJ32336.1  3 SSCNDIRSALAACLQSSDCVLIQRNKPSDCLRPPlLETLPTKCQQLKKGYGQCKRGMVDMRKRFRGN 69
                79****************************************************************8 PP

>> PAN_3  PAN-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.4   2.2e-05      0.13      21      45 ..       7      32 ..       2      34 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.2e-05
       PAN_3 21 swddCvqkCledstCilaykn.senC 45
                + ++ ++ Cl++s+C+l++ n  + C
  KHJ32336.1  7 DIRSALAACLQSSDCVLIQRNkPSDC 32
                55566789*************88888 PP

>> COBRA  COBRA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.2   4.8e-05      0.28      40      86 ..      14      60 ..       5      72 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.8e-05
       COBRA 40 qateqgdCskykeskplsCekkPvivDllpekpkdkqvanCCrgGvl 86
                   +++dC  ++++kp  C + P +  l+++ ++ k+    C+ G++
  KHJ32336.1 14 ACLQSSDCVLIQRNKPSDCLRPPLLETLPTKCQQLKKGYGQCKRGMV 60
                34899*********************999999888887778888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.20s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 980.74
//
Query:       KHJ32337.1  [L=448]
Description: putative saccharopine dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-91  307.3   0.0    2.2e-91  306.6   0.0    1.3  1  Sacchrp_dh_C     Saccharopine dehydrogenase C-terminal domain
    3.1e-23   82.4   0.2    8.6e-23   81.0   0.4    1.6  2  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
    1.1e-05   25.5   0.2    2.3e-05   24.5   0.2    1.6  1  Shikimate_DH     Shikimate / quinate 5-dehydrogenase
    0.00071   19.5   0.0     0.0012   18.8   0.0    1.4  1  NAD_binding_10   NAD(P)H-binding
     0.0017   17.7   0.1     0.0029   16.9   0.1    1.3  1  AlaDh_PNT_C      Alanine dehydrogenase/PNT, C-terminal domain
     0.0032   17.0   0.4      0.009   15.6   0.2    1.8  2  IlvN             Acetohydroxy acid isomeroreductase, NADPH-bi


Domain annotation for each model (and alignments):
>> Sacchrp_dh_C  Saccharopine dehydrogenase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  306.6   0.0   7.4e-95   2.2e-91       1     265 []     125     440 ..     125     440 .. 0.93

  Alignments for each domain:
  == domain 1  score: 306.6 bits;  conditional E-value: 7.4e-95
                   BTTTBHHHHHHHHHHHCCCHTTBECCCCCCCCCCCCECCCCESTTCEEESS-HHHHHHHCCSEEEEEETTEEEECTCCCSGCC.TCEEECCCCCEEC CS
  Sacchrp_dh_C   1 GldPGidhllamkaidevkakggkiesflsycgglpapeasdnplgYkfsWspegvlreltnpakvlengqvkevpgsellkgakkpiyilpglsle 97 
                   G+dPG+dhl+a+k+i+ev+++ggki sflsycgglpape+sdnplgYkfsWs +gvl++l+n+ak++++g+ +e+ g++l+ +a k+++i+pg++l+
    KHJ32337.1 125 GVDPGLDHLYAVKTIEEVHNAGGKIISFLSYCGGLPAPENSDNPLGYKFSWSSRGVLLALRNTAKYIKDGKSVEIIGKDLMGTA-KTYHIYPGFALV 220
                   9********************************************************************************866.89999******* PP

                   TTECEEECTHCHHHHHHC.SCSEEEEEEEEEHHHHHHHHHHHTTT--SCEC..C.........................................CC CS
  Sacchrp_dh_C  98 gypnrdslpyeelyglpeaktlfrgtlrypgfsellkslkelGllseepke..e.........................................al 151
                   +ypnrds+ y+e y++pea+t++rgtlry+gf+e+++ l+++G+ls+e  +  +                                         ++
    KHJ32337.1 221 AYPNRDSTIYKERYNIPEAQTVIRGTLRYQGFPEFVRVLVDIGFLSDEARPflStsipwkeatknilsasssnvqdlklaieskatflnseekerII 317
                   **********************************************9986665379*********************99999999999999998866 PP

                   CC..HH....ST...TC.EHHHHHHHHCCHHCCCCTTEEEEEEEEEEEEEE.TTSEEEEEEEEEEEEE.EHHSSSHHHHHHHHHHHHHHHHHHTTSC CS
  Sacchrp_dh_C 152 ka..wl....se...ge.spldvlaalLekklalepgerDlvvlqhefgie.sdgkkkekktstlvgy.deegssamaktvGvpaaiaaklildgki 236
                   ++  w+    +e    + +pld+l+ lLekk+++e+gerD+v+lqh+f+ie +dg + e++tstlv+y ++ g+samak vGvp+++aa ++ldg+i
    KHJ32337.1 318 NGlnWIgifsDEkiiPQgNPLDTLCTLLEKKMQYEKGERDMVILQHKFEIEhKDGGR-ETRTSTLVEYgNPDGYSAMAKLVGVPCGVAALHVLDGSI 413
                   6666767663234541457*********************************99998.*********97566************************* PP

                   TSSEEEEGGGS.CHHHHHHHHHHHHHC.T- CS
  Sacchrp_dh_C 237 kkrGvvtpeelvdpeiyeplleeLeke.Gi 265
                   +++G+v+p   ++++i++pl++ L+++ Gi
    KHJ32337.1 414 SEKGMVAP---LSSKINDPLIKTLKEKyGI 440
                   ********...8999**********98786 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.0   0.4   2.9e-26   8.6e-23       1     130 []       7     121 ..       7     121 .. 0.97
   2 ?   -2.7   0.0       2.2   6.6e+03      81     100 ..     292     311 ..     287     316 .. 0.75

  Alignments for each domain:
  == domain 1  score: 81.0 bits;  conditional E-value: 2.9e-26
                      EEEE--SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHHTTTCEEEEE--TTTHHHHHHHHHTTSSEEEE-SSGGGHHHHHHHHHHHT- CS
  Sacchrp_dh_NADP   1 vliiGaGsvGqavaellarhfdvdaeitvadrskeklealaakalgvrfeaialdaenyeavLaallkegdlvvnlsppissldvlkaCietgv 94 
                      +l++GaG+v +++++ l++ + +   +tva+r+ e +++l +    +++++i+ld+++++a L+a ++++dlv++l+p+++++ v+k +i+++ 
       KHJ32337.1   7 ILMLGAGFVTRPTLQILSDAGII---VTVACRNIETAQNLSK--GVKNANPISLDVSDQQA-LDAEVAKNDLVISLIPYVYHAIVIKSAIRNKK 94 
                      89******************988...***********99985..7899*************.******************************** PP

                      EEEESS-BCGCCSCHCCSHHHHHTHHHHHHCTSEEE CS
  Sacchrp_dh_NADP  95 hyvdtsiskeertnyalreavlklkekakeagvtav 130
                      ++v+ts+         +++a+++l+++akeag+t++
       KHJ32337.1  95 NVVTTSY---------ISPAMMELDQDAKEAGITVM 121
                      *******.........******************97 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.2
                      GHHHHHHHHHHHT-EEEESS CS
  Sacchrp_dh_NADP  81 ssldvlkaCietgvhyvdts 100
                      s+ + lk++ie ++ +++ +
       KHJ32337.1 292 SNVQDLKLAIESKATFLNSE 311
                      56666899999999999865 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.2   7.5e-09   2.3e-05      11      83 ..       3      77 ..       1     107 [. 0.81

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 7.5e-09
                  TT-EEEEES-SHHHHHHHHHHHCCT-CEEEEEESSHHHHHHHHHHHT.ET-EEEEGCG...HHHHHHT-SEEEE-S CS
  Shikimate_DH 11 kekkvlliGaGemaelvakhLlakgvkkvvvaNRtlerakelaeelkgeeiealklee...lkellaeadvvisat 83
                  ++kk+l++GaG + + +++ L+++g+  v+va R++e a++l + +k+++   l++++   l++ +a++d+vis +
    KHJ32337.1  3 SSKKILMLGAGFVTRPTLQILSDAGII-VTVACRNIETAQNLSKGVKNANPISLDVSDqqaLDAEVAKNDLVISLI 77
                  689***********************9.*****************98876555554432228889999***99865 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   3.9e-07    0.0012       3      69 ..      12      89 ..      11     168 .. 0.77

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 3.9e-07
                    TSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHHCT.TTCEEEE--TT-CCHHHHHHTT-SEEEES-...........- CS
  NAD_binding_10  3 tGkvGrllvkellargghevtalvRnpeklaeleae.eglevvegdvtdvedlaealkgadaVvsal...........g 69
                     G v r  ++ l ++ g+ vt+  Rn e +++l++  ++++ +++dv+d+++l + ++  d V+s +           +
      KHJ32337.1 12 AGFVTRPTLQILSDA-GIIVTVACRNIETAQNLSKGvKNANPISLDVSDQQALDAEVAKNDLVISLIpyvyhaiviksA 89
                    577888889999999.5***************995569**************************998777766666542 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.1   9.9e-07    0.0029      29      97 ..       5      75 ..       2      87 .. 0.94

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 9.9e-07
                 -EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH..TTTCECEEHCHHHHHHHHHHHH-SEEEE CS
  AlaDh_PNT_C 29 akvlviGgGvaGlqAiatakglgakVtvlDvrparleqles..lgakfvevlksqeellaeavkeadvvig 97
                  k+l +G+G +    +++ +  g +Vtv   +++++++l++   +a+ +++  s++++l+ +v++ d+vi+
   KHJ32337.1  5 KKILMLGAGFVTRPTLQILSDAGIIVTVACRNIETAQNLSKgvKNANPISLDVSDQQALDAEVAKNDLVIS 75
                 5899*************************************9888999**********************8 PP

>> IlvN  Acetohydroxy acid isomeroreductase, NADPH-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.2     3e-06     0.009       3      84 ..       3      93 ..       1     103 [. 0.84
   2 ?   -2.1   0.0       0.8   2.4e+03     118     148 ..     114     145 ..     111     160 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3e-06
                HTS-EEEES-SHHHHHHHHHHHHTT--EEEEE-TT-......HHHHHHHHTT-EEEEHHHH...HHT-SEEEE-S-HHHHHHHHHHHTGGG CS
        IlvN  3 kgkkiaviGyGsqGhaqalnlrdsgldvvvglregs......ksvkkAkeegfevltvaea...vkkadvvmiliPDelqkevyeeeiepn 84
                ++kki ++G G   +   + l d+g+ v+v+ r+ +      k vk+A+  +++v + + +   v+k d+v+ liP  +++ v++++i+++
  KHJ32337.1  3 SSKKILMLGAGFVTRPTLQILSDAGIIVTVACRNIEtaqnlsKGVKNANPISLDVSDQQALdaeVAKNDLVISLIPYVYHAIVIKSAIRNK 93
                589****************************9986655555568899999999998765432238899****************9999864 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.8
                 SS-SHHHHHHHHTT----EEEEEE.E-SSS-H CS
        IlvN 118 kgpGhlvreeyeegkGvpaliave.qdasgka 148
                 k  G +v++e     G+ +l+av+  ++ ++a
  KHJ32337.1 114 KEAGITVMNEIGVDPGLDHLYAVKtIEEVHNA 145
                 66788888888889999999999842333444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (448 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.39
# Mc/sec: 3404.03
//
Query:       KHJ32338.1  [L=567]
Description: putative pre-rrna processing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (567 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 4128.94
//
Query:       KHJ32339.1  [L=391]
Description: putative diphosphomevalonate decarboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-62  209.9   0.0    3.9e-62  209.3   0.0    1.3  1  MDD_C           Mevalonate 5-diphosphate decarboxylase C-term
    1.2e-08   35.1   1.1    3.1e-08   33.7   1.1    1.7  1  GHMP_kinases_N  GHMP kinases N terminal domain


Domain annotation for each model (and alignments):
>> MDD_C  Mevalonate 5-diphosphate decarboxylase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.3   0.0   4.3e-66   3.9e-62       1     185 [.     198     377 ..     198     379 .. 0.92

  Alignments for each domain:
  == domain 1  score: 209.3 bits;  conditional E-value: 4.3e-66
       MDD_C   1 vlilvvsdekkkvsStsGmqrsvetSeLlkhrakevvperieelekAikekdFetfaeitmkdSnqlhavcldtyPpifYlndtSraiielvhelNeaa 99 
                 +lilv+s +kk+vsStsGmq +++tSeL++ r+++vvp+ i+ +++Ai +kdFetfa++tm+dSn++ha+cldtyPpifY+nd+Sra i+lv+ lN   
  KHJ32339.1 198 ALILVISGSKKDVSSTSGMQATTKTSELFNRRVETVVPANIKMMQSAIMKKDFETFAKVTMSDSNNFHATCLDTYPPIFYMNDISRATIRLVEYLNCIL 296
                 69************************************************************************************************* PP

       MDD_C 100 gkikvAYtFDAGpNavlyleekdveellsllkklfppesdaeefvkgakveeaaelseelkaslalkeskgavkriiltkvgdGpk 185
                 +++ +AYtFDAGpNav+y++e+d + ++  +k ++ + + ++    ga+v++   +++ +  + a++  ++ v+r+i+t +gdGp 
  KHJ32339.1 297 NRTVAAYTFDAGPNAVIYYQEEDEKLVVGHVKGILGHVDGWQGR--GATVSPL--INDGFD-QRATELLHNGVSRVIMTGIGDGPI 377
                 **********************************9996555443..4445554..556655.5688999****************6 PP

>> GHMP_kinases_N  GHMP kinases N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   1.1   3.5e-12   3.1e-08       1      66 []     109     167 ..     109     167 .. 0.86

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 3.5e-12
                     EEEEEESSHTTSSSCHHHHHHHHHHHHHHHHTTEHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHSS CS
  GHMP_kinases_N   1 divikseiPvgaGLGSSAAlavalvaAllallglsleeaklaleaerlaqggngsggDvaasvyGg 66 
                     +iv+++++P++aGL+SSAA  +alv A+++l+       +l   +  l   ++ + g ++ s++Gg
      KHJ32339.1 109 RIVSQNNFPTAAGLASSAAGFAALVFAIAKLY-------ELPTSSTDLSRIARQGSGSACRSLFGG 167
                     6899****************************.......677777777777778888888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2940.47
//
Query:       KHJ32340.1  [L=363]
Description: putative phosphoglycerate mutase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-12   45.9   0.0      1e-11   44.9   0.0    1.5  1  His_Phos_1  Histidine phosphatase superfamily (branch 1)
  ------ inclusion threshold ------
       0.11   12.5   0.1       0.25   11.4   0.1    1.6  1  DUF3592     Protein of unknown function (DUF3592)


Domain annotation for each model (and alignments):
>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.9   0.0   1.1e-15     1e-11      14     159 ..     154     317 ..     124     333 .. 0.80

  Alignments for each domain:
  == domain 1  score: 44.9 bits;  conditional E-value: 1.1e-15
                 -.....TT----B-HHHHHHHHHHHHHHTT.S---EE......EE-SSHHHHHHHHHHHHCTT......--EEE-GGGS----G..GGT.T-B.HHHHH CS
  His_Phos_1  14 egr.lqgrtdvpLteeGreqAealaerlag.epidai......ysSplkRarqTaeliaealg......lpveldegLrEidfG..dwe.glttaeiae 95 
                 +g     + d++L+++G+ qA+ + ++ a+ +++++i      y+Spl R++qTa      l+       ++ ++e LrE + G  +++   ++++i++
  KHJ32340.1 154 NGNeTMSWLDAELSPLGVSQAQSAHKFWAEmIEVEKIpipevyYVSPLLRCQQTAWNTFSGLNlpidkpFKPVIKELLRE-CIGahKCDmRSPKSKIQA 251
                 3334679********************888867777777777*********************66666666789******.455234554556889*** PP

                 H..HSHHHHHHHHH-GGG-B..S-BHHHHHHHHHHHHHHHHHHTTTSEEEEEE-HHHHHHHHHHHH CS
  His_Phos_1  96 eypeeleawlrdpadvrppg..gEsledvaaRvaaaleelaarhegetvlvVsHggvirallarll 159
                 +yp++  +   ++ d   +    E+ e++ +R + +l++++ + +   + + sH g i ++l+ l 
  KHJ32340.1 252 RYPDWVFENGFSETDKLWSSilRETDEAIDQRTKIVLDDILLNDKHTFISISSHSGQIGSALRVLG 317
                 *****9998888888777779***********************9988*********999998765 PP

>> DUF3592  Protein of unknown function (DUF3592)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   2.8e-05      0.25       3      98 ..      23     157 ..      21     165 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.8e-05
     DUF3592   3 glllfglifllaglallvlgglllvgk.............................................yllsgqwervpgtvlssehrhrsdgsr 56 
                 + +++++if++++++ +  g +                                                   l ++qw+r +++v  ++    s+++ 
  KHJ32340.1  23 VSITLIAIFITVAFMIMAEGSSGSRTEhlelstvagyfqqddpgtdaasfdftknnfglikrsyendalfdpDLKMTQWQRFEAEVFHLN----SRSGP 117
                 667777888888888888887665444788888888888888888888888888888888888888888888899***************....44442 PP

     DUF3592  57 sstysvtvrYrysfqgervs....glysgsdnvgdyaaqlyraGna 98 
                 ++ y  +v Y  +  ge +      +y++   ++ y+++  + Gn 
  KHJ32340.1 118 NTKY--KVLYMGR-HGEGYHniaeSFYGT-KAWDCYWSR--QNGNE 157
                 2444..4667777.665444555778887.349999999..88875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       464  (0.0258799); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2794.83
//
Query:       KHJ32341.1  [L=150]
Description: putative upf0591 membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-27   95.3   2.6    3.6e-27   95.1   2.6    1.0  1  DUF1761   Protein of unknown function (DUF1761)


Domain annotation for each model (and alignments):
>> DUF1761  Protein of unknown function (DUF1761)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.1   2.6     2e-31   3.6e-27       2     124 ..      13     139 ..      12     140 .. 0.98

  Alignments for each domain:
  == domain 1  score: 95.1 bits;  conditional E-value: 2e-31
     DUF1761   2 avllaalaafvvGflwYgpvFgkaWmkergmteekakeaenk......alamglslvlslliayvlaallaalgartfkagallglllglgfiapaiis 94 
                 a++l++++++++++++ gp+Fg+++   r++++++++e+ n+      ++a+g+s+++s++++y++aal++a+g+ ++k++a lg+l++++ +ap++i 
  KHJ32341.1  13 AIALGTAFNHIASLAILGPIFGDTYD--RALSANSKEEFFNSketasaTAAWGTSIIGSAIQSYGVAALINATGTLSYKGSASLGTLIFMASSAPSFIA 109
                 9*************************..***********9999******************************************************** PP

     DUF1761  95 nalfekkslklvlIdagywlvtllvmgvil 124
                 ++++ek++l++++++++++l+++++++++l
  KHJ32341.1 110 HIVTEKRPLDTIAVGTVARLFETVGLSLFL 139
                 ***************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       413  (0.0230353); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 1128.14
//
Query:       KHJ32342.1  [L=580]
Description: putative mfs transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.1e-36  124.3  17.1    5.1e-36  124.3  17.1    1.7  2  MFS_1       Major Facilitator Superfamily
      6e-12   45.1   8.3    1.9e-08   33.6   0.2    2.2  2  MFS_1_like  MFS_1 like family
    5.5e-08   32.1   4.1    5.5e-08   32.1   4.1    2.3  2  Sugar_tr    Sugar (and other) transporter
      5e-05   22.8   6.1      0.016   14.5   1.0    2.2  2  MFS_4       Uncharacterised MFS-type transporter YbfB
  ------ inclusion threshold ------
       0.12   10.9  20.3      0.061   11.9   3.8    3.0  3  MFS_2       MFS/sugar transport protein


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.3  17.1   1.4e-39   5.1e-36       3     353 .]      76     519 ..      74     519 .. 0.81
   2 ?   -1.9   0.1      0.33   1.2e+03     263     295 ..     525     557 ..     520     565 .. 0.59

  Alignments for each domain:
  == domain 1  score: 124.3 bits;  conditional E-value: 1.4e-39
       MFS_1   3 laaflsalarsilgpalplal...aed.....lgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrv 93 
                 l+af+s+   ++l+++ p +l    ++     ++  + ++g+l +++al ++++++++G+lsd +Gr++v+++g +++a++++++ f+ +lw  ++  +
  KHJ32342.1  76 LLAFISFVEQTALNSMSP-YLpemVTTfpevkFQDKGIAVGTLGSVFALSQFATNFFWGWLSDQIGRKPVMMIGTISTAACFFAFGFCRNLWQAILIQA 173
                 666666666666666666.5522233323333444556699999*************************************4444499*********** PP

       MFS_1  94 lqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg...........Wravfyilaivsllafvlfllllpeepperkr 181
                 l+Gl   +   ++ + + ++++k+++++++ +l + f++Ga+ gp+lggl++ + +           +  + +++ai++ +  vl+++ll e+ ++++ 
  KHJ32342.1 174 LMGLV-NGNQGIISSCLGEITNKSNQSQVFVYLPMVFGIGAVTGPALGGLMIFQRNpfkkdqknpfpFLIPNIFAAIILTVTSVLMACLLEETLVKSEG 271
                 *****.588888999*************************************55558******998888889999999999999*************** PP

       MFS_1 182 kspkeee.............................................................kgtgpaplvpawkallkdpvlwillialllf 219
                 +++++++                                                               t  ++ ++   +l++d    ill + l+f
  KHJ32342.1 272 SESIRKRislffrqfwklllkfrtnfscnltskspealsyldeninenlnpnedtsllsnsviysdfeDDTIFKSRTS-KMILCRDTL--ILLGTYLVF 367
                 ****************************99999999999999988888877666666665555544432222222222.233333332..477777777 PP

       MFS_1 220 ffgfsglltllplylqevlgls...glllaglllallalvgail.allagrlsdrlgrrrrlllallllllaalglallavt.........ssavllll 305
                  + + ++ +l p++l e    +   ++ ++gl l++++++++i+ ++++ +l +++g++ +  ++l++l+++ +++ +++ +         ++++++++
  KHJ32342.1 368 QLSNVSFNSLYPIFLSEKEPVGrnlSVESIGLSLSVSGIIAIIFqGIFLEQLKHKIGNKATYRVGLFFLSISMIAMPWISYShsspliecgNESLWFWI 466
                 778888********9988777777879*****************9*************************************99999999888888888 PP

       MFS_1 306 ....vlvl..iGf.glgfvfpsllalasdlappeeagtasglfntagslggalgp 353
                     +l+l  i f g+++   +l++ +++++  +  gt++gl++t++++g+a+gp
  KHJ32342.1 467 elgfLLFLktIAFvGGFTSALLLITNTAHSH--SILGTLNGLAQTLSAAGRAIGP 519
                 9985555577777333333555555555555..99*******************8 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.33
       MFS_1 263 lagrlsdrlgrrrrlllallllllaalglalla 295
                 l+++  +++++r +l ++++++++++ +la ++
  KHJ32342.1 525 LFSAATRKINSRGILPWTVFGGVAFLSFLASFG 557
                 555556666666666666666666555555444 PP

>> MFS_1_like  MFS_1 like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.2   5.2e-12   1.9e-08     224     377 ..      71     227 ..      25     232 .. 0.82
   2 !   14.0   3.5   4.7e-06     0.017     187     376 ..     249     528 ..     237     535 .. 0.73

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 5.2e-12
  MFS_1_like 224 npeviifllvalilgmswgiienF....lflYL.kelgasntllGslvalgvvaeiplfffaeklleklGhvklliiallayilrfllyaiienawlvl 317
                 +++++++ ++ ++ +++ + +  +    ++ +   + +  ++ +G+l  + ++++  + ff  +l +++G   +++i+ +++++ f+  ++++n+w ++
  KHJ32342.1  71 KKQLLLLAFISFVEQTALNSMSPYlpemVTTFPeVKFQDKGIAVGTLGSVFALSQFATNFFWGWLSDQIGRKPVMMIGTISTAACFFAFGFCRNLWQAI 169
                 566667777777777777777777555433343222233445667777777788888899999************************************ PP

  MFS_1_like 318 pievLhgisfgllwaaaveyvskiapksleatgqgllsglyfglGralGsliGGllwdlk 377
                 +i++L g+  g   +++ +   +i+ ks ++++  ++  + fg+G   G  +GGl++ + 
  KHJ32342.1 170 LIQALMGLVNGNQ-GIISSCLGEITNKSNQSQVF-VYLPMVFGIGAVTGPALGGLMIFQR 227
                 ***********99.9999999*********9988.566667**************99444 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 4.7e-06
  MFS_1_like 187 aallvisllvvlilnetekesklkvtksl.....................................................................q 216
                 ++l v+s+l++  l+et  +s+      +                                                                     +
  KHJ32342.1 249 IILTVTSVLMACLLEETLVKSEGSESI-RkrislffrqfwklllkfrtnfscnltskspealsyldeninenlnpnedtsllsnsviysdfeddtifkS 346
                 444555555555555555555444443.24677777888888888888888888888888888888888888888888888888888888888888885 PP

  MFS_1_like 217 vllnilknpeviifllvalilgmswgiienFlflYLkel.....gasntllGslvalgvvaeiplf.ffaeklleklGhvk.....lliiallayilrf 304
                    +++  +  +i+l + l+ + s+  +++ + ++L+e+     + s + +G  + +  +  i++  +f e+l +k+G        l +++++++++ +
  KHJ32342.1 347 RTSKMILCRDTLILLGTYLVFQLSNVSFNSLYPIFLSEKepvgrNLSVESIGLSLSVSGIIAIIFQgIFLEQLKHKIGNKAtyrvgLFFLSISMIAMPW 445
                 667777778888999999999***************665233336788889988888777777664478999999999865222226677777888888 PP

  MFS_1_like 305 llyaii........enawlvlpie...vLhgisfgllwaaave.yvskiapksleatgqgllsglyfglGralGsliGGllwdl 376
                 + y+          e++w+ + +    +L+ i+f   + +a     + + ++s+ +t+ gl ++l   +Gra+G +++G l+  
  KHJ32342.1 446 ISYSHSspliecgnESLWFWIELGfllFLKTIAFVGGFTSALLlITNTAHSHSILGTLNGLAQTL-SAAGRAIGPILSGSLFSA 528
                 88888789999999999998866522257899987777665550556667899*********999.789***********9964 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   4.1   1.5e-11   5.5e-08      46     194 ..     112     265 ..      72     280 .. 0.76
   2 ?   -1.2   4.8      0.19   6.8e+02      53      99 ..     404     449 ..     359     558 .. 0.65

  Alignments for each domain:
  == domain 1  score: 32.1 bits;  conditional E-value: 1.5e-11
                 .HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHH CS
    Sugar_tr  46 vlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyq 144
                 + +g + s+f + ++++ +f g+l+d +GRk++++i+++ + ++ +  +++    ++++ i+ + l+G+  G + ++++  ++Ei+ k+  +++ ++  
  KHJ32342.1 112 IAVGTLGSVFALSQFATNFFWGWLSDQIGRKPVMMIGTISTAACFFAFGFCR---NLWQAILIQALMGLVNGNQ-GIISSCLGEITNKSNQSQVFVYLP 206
                 56788889********************************************...9*************98865.66667789**99999998888888 PP

                 HHHHHHHHHHHHHHHHHHTSS-......TTHHHHH...HHCCHHHHHHHHHHGGGS--- CS
    Sugar_tr 145 laitfGilvaaifglglnktsn......adgwril...lglqlvpallllilllflPES 194
                 +   +G + +  +g  +   +n      ++ +++l   ++ +++++++ +++ ++l+E+
  KHJ32342.1 207 MVFGIGAVTGPALGGLMIFQRNpfkkdqKNPFPFLipnIFAAIILTVTSVLMACLLEET 265
                 88888888777776666555556666443333332111234445555555555666666 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.19
                 HTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTT CS
    Sugar_tr  53 siflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgk 99 
                 s  ++  i+ ++f+  l +++G+k ++ ++ ++++i+ + + ++   
  KHJ32342.1 404 SG-IIAIIFQGIFLEQLKHKIGNKATYRVGLFFLSISMIAMPWISYS 449
                 32.34455566777778889999999999999999999888888733 PP

>> MFS_4  Uncharacterised MFS-type transporter YbfB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   1.0   4.4e-06     0.016     231     338 ..     117     224 ..      88     233 .. 0.78
   2 !   10.7   0.3   6.7e-05      0.24      85     169 ..     475     559 ..     452     579 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 4.4e-06
       MFS_4 231 lWllvGlaaivgvlvwlrvakrsglrralaaallieavgvllsllspsplglivssvllGlt..flaitalvlqlarelappatrrllglmTasfgigQ 327
                 l +++ l+ +++ + w +++++ g ++++ +  +  a++ ++      +   i+   l+Gl     +i+++ l  + + + +   +++  + ++fgig 
  KHJ32342.1 117 LGSVFALSQFATNFFWGWLSDQIGRKPVMMIGTISTAACFFAFGFCRNLWQAILIQALMGLVngNQGIISSCLGEITNKSNQ--SQVFVYLPMVFGIGA 213
                 558999**********************************998766666666666666665511368999999988877665..5689999******** PP

       MFS_4 328 ilGpllaslla 338
                 + Gp+l +l+ 
  KHJ32342.1 214 VTGPALGGLMI 224
                 *****999875 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 6.7e-05
       MFS_4  85 lliRflaGvasAvvlvfgsslvlahaaaarrervgallfaGvGlGiavsgllvllllqlglsassl.Wlalavlsavllllvalll 169
                   i f+ G +sA+ l+  ++ +   +  + ++  + l  aG  +G ++sg l +++ ++  s   l W +++ ++++ +l+++ + 
  KHJ32342.1 475 KTIAFVGGFTSALLLITNTAHSH-SILGTLNGLAQTLSAAGRAIGPILSGSLFSAATRKINSRGILpWTVFGGVAFLSFLASFGIK 559
                 3688***********99888764.458889999999999******9999999999988888888778*************998665 PP

>> MFS_2  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   3.8   1.7e-05     0.061     260     327 ..     113     178 ..      64     189 .. 0.77
   2 ?    9.4   6.2   9.3e-05      0.34     262     327 ..     115     178 ..      94     301 .. 0.74
   3 ?    7.1   4.0   0.00049       1.8     224     377 ..     355     522 ..     342     535 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.7e-05
       MFS_2 260 aasvfllvvtisallgiplwqplakrlgkkntyllgalltivllvlvlllqpsnlllflvllviagfg 327
                 a+ ++  v+ +s++++ ++w +l   +g+k ++++g+++t++ ++ + +   +nl+ +++++++ g+ 
  KHJ32342.1 113 AVGTLGSVFALSQFATNFFWGWLSDQIGRKPVMMIGTISTAACFFAFGFC--RNLWQAILIQALMGLV 178
                 44556668889999****************************99999999..8999999999888876 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 9.3e-05
       MFS_2 262 svfllvvtisallgiplwqplakrlgkkntyllgalltivllvlvlllqpsnlllflvllviagfg 327
                  ++  v+ +s++++ ++w +l   +g+k ++++g+++t++ ++ + +   +nl+ +++++++ g+ 
  KHJ32342.1 115 GTLGSVFALSQFATNFFWGWLSDQIGRKPVMMIGTISTAACFFAFGFC--RNLWQAILIQALMGLV 178
                 444556777777888888888888888888888887777777777777..6777777777666654 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.00049
       MFS_2 224 raflillllfllaalalgvlnglllYylty..vlgngsaasvfllvvtisallgipl....wqplakrlgkkntyllgalltivllvlvlll....... 309
                 r  lill ++l+++l+ +  n+l+  +l     +g +  ++ + l + +s++++i++       l+ ++g+k+ty +g+ ++ + ++ + ++       
  KHJ32342.1 355 RDTLILLGTYLVFQLSNVSFNSLYPIFLSEkePVGRNLSVESIGLSLSVSGIIAIIFqgifLEQLKHKIGNKATYRVGLFFLSISMIAMPWIsyshssp 453
                 6678999999999999999999998888641157888888888999999999988752222678999********************999999999999 PP

       MFS_2 310 .......qpsnlllflvllviagfgvgvaallpwsmladvvDygelktGkrregvffavlsfisklatgiglgvs 377
                        + + ++ + +ll+++ +++++ ++ +  +++ ++            g++ ++  ++s ++ +ig ++s
  KHJ32342.1 454 liecgneSLWFWIELGFLLFLKTIAFVGGFTSALLLITNTAHSHS------ILGTLNGLAQTLSAAGRAIGPILS 522
                 999987777778888888888888888888888888877665544......445555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (580 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.24s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 4144.08
//
Query:       KHJ32343.1  [L=1262]
Description: putative hect-domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.3e-67  227.7   0.0    5.8e-67  226.3   0.0    1.7  1  HECT           HECT-domain (ubiquitin-transferase)
    5.6e-17   61.7   2.1    1.7e-16   60.1   2.1    1.9  1  AZUL           Amino-terminal Zinc-binding domain of ubiquiti
  ------ inclusion threshold ------
       0.15   11.6   0.2        4.5    6.8   0.0    2.4  2  Y_phosphatase  Protein-tyrosine phosphatase
       0.15   12.4   0.0       0.34   11.3   0.0    1.5  1  PXT1           Peroxisomal testis-specific protein 1


Domain annotation for each model (and alignments):
>> HECT  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.3   0.0   1.3e-70   5.8e-67       3     306 ..     941    1261 ..     939    1262 .] 0.89

  Alignments for each domain:
  == domain 1  score: 226.3 bits;  conditional E-value: 1.3e-70
                  HHHHHT-GGGSSEEESSTTSSSEEE-TTHHHHS....HHHHHHHHHHHHHTT--BSS-B-HHHHHHHTT-.---TCHHHHH-HHHHHHHHHHH..HS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT    3 lskelldpklglfeeesedsgtlypkpssseeellklfeflGkvlGkaiyeeilldlpfsraflkfllgeekitledleeidpelakslkellsles 99  
                   ++e+ldp++g f +++++s+  +++p s e   l ++e++G+++++a+y++++l+++f+ a++++llgee  +l+++ +  p+l + l++ll++++
  KHJ32343.1  941 AIAEALDPDYGTF-TTDSRSRMTWFQPGSPE--PLWKYELIGIIMSLAVYNGLTLPVTFPMALYSKLLGEEVTELHQIMDGWPDLVNGLTSLLEWDE 1034
                  67899********.57999999999998643..4478********************************8555555555556*************** PP

                  -GGG...GT-...BSEEEEETTEEEEEESSTTGGG.....................SB--TTTHHHHHHHHHHHHHTGGGHHHHHHHHHHHHTTS-H CS
                  xxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxx.....................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT  100 nteevedlaL...tFtipenagasatieLipnGan.....................ipVtnenkkeYiklyvnyllkksvekqleaflkGfsevips 172 
                  ++  ved+     +F+i+ ++g++ + e++++  n                       Vt en+++Y+k y++yl++ sv++q++af++Gf ++i+ 
  KHJ32343.1 1035 KNGLVEDIFTrtyEFSID-QFGKQVSREMKEDALNlctwpqfsllsqsaalnpcdaPLVTGENREKYVKDYIRYLTDVSVRPQFRAFKDGFFTCISP 1130
                  *999**996664477766.4999998886666666666666666666666777776689************************************** PP

                  HHHTTS-HHHHHHHHBCSSS.--HHHHHHTEEE...ETT--TTSHHHHHHHHHHHHS-HHHHHHHHHHHHSSSS--TTCGGG-B--EEEEE-S..-T CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT  173 kalklfdaeelellisGedelidvedlrrntey...kggynaesetiewlweilkefspeekrlfLqFvTgssrlPlgGfaelhpkftierkskede 266 
                  +++++fda+ l++l++G + +id+++lrr+t+y   +   +a++ ti+ +w+i+ +++ +++r++L+FvT+s+r+P+gG++ l  +f i+r++ +++
  KHJ32343.1 1131 RSVSFFDASTLQSLVEGVQ-VIDIDELRRITRYiawE--GDANHHTIQDFWRIVAKYDIDMRRKLLEFVTASDRVPVGGMSGL--QFAIQRNG-TND 1221
                  *******************.7************8443..58******************************************..******88.999 PP

                  TS--EEEGGGTEEEE---SSHHHHHHHHHHHHHHHH--XX CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT  267 trLPtahTCfnlLklpdYsskeilkekLltAieetegFel 306 
                  + LPt+ TC   L lp+Yssk++l+++L +A+e+++gF++
  KHJ32343.1 1222 SFLPTSYTCYGILLLPEYSSKDLLENRLAMALENSKGFGF 1261
                  **************************************97 PP

>> AZUL  Amino-terminal Zinc-binding domain of ubiquitin ligase E3A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.1   2.1   3.9e-20   1.7e-16       1      59 []      65     129 ..      65     129 .. 0.98

  Alignments for each domain:
  == domain 1  score: 60.1 bits;  conditional E-value: 3.9e-20
        AZUL   1 fkklveqYfyQLthGCgsknCtnptCassr.....kapvrrltpnsAaalAleLakqde.eagLC 59 
                 f+ l  ++++Q+++GC+ k+C + tC+s+r      apvrr++++sA++lA ++++qd+ e+gLC
  KHJ32343.1  65 FELLLDRFIHQIRYGCNCKACITTTCFSCRkrlanGAPVRRYNTTSARVLAFHMISQDNpEEGLC 129
                 67899************************************************************ PP

>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1     0.026   1.2e+02     134     221 ..     219     304 ..     158     309 .. 0.67
   2 ?    6.8   0.0   0.00099       4.5      42      68 ..    1160    1187 ..    1130    1200 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.026
                    EEEEEEESSS-SSSSGSCCHHHHHHHHHHHHHHSTTSS-EEEECSSSS.HHHHHHHHHHHHHHHHHHHSE...EEHHHHHHHHHTTSTTSS- CS
  Y_phosphatase 134 evkqlqytnWpdhgvpesaksllklirkvekskeaksgpvvVhCsaGv.gRtgtfvaldillqqleaeee...vdvlqivkelrkqRpgmvq 221
                    e+  +++ +W    +p++ ++l+++ ++ e +    ++++v    +Gv g++++ ++ di   q+e++ +   ++ lq++++l + + ++v 
     KHJ32343.1 219 ETVAIKMAEWL---TPSNFEKLTNMQDESEINP---NASIVCNKENGVgGKSSSSISSDISQAQIEEKPNkmnFETLQVFESLENPKSSSVA 304
                    33344444443...5667777777777766666...999********9459***************95555679999999999999888886 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.00099
                     EEEEEEE---G.GGHHHHHHHHHHTT-- CS
  Y_phosphatase   42 kkyIatQgPlk.stvedFWrmvwqekvk 68  
                      +yIa  g  + +t++dFWr+v ++++ 
     KHJ32343.1 1160 TRYIAWEGDANhHTIQDFWRIVAKYDID 1187
                     678888887666***********99876 PP

>> PXT1  Peroxisomal testis-specific protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   7.6e-05      0.34      16      45 ..     871     900 ..     869     903 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 7.6e-05
        PXT1  16 qEdlqqdgrdalahFvlfffrrvhvlLrFf 45 
                 +E+lqq  r a  +F+++ +rr hvlL  f
  KHJ32343.1 871 REKLQQRLRTATTKFMVMEIRRTHVLLDTF 900
                 7**************************877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       716  (0.0399353); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.79u 0.28s 00:00:01.07 Elapsed: 00:00:00.46
# Mc/sec: 8214.39
//
Query:       KHJ32344.1  [L=72]
Description: hypothetical protein EV44_g5744 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.03   14.1   0.0      0.043   13.6   0.0    1.3  1  HTH_psq   helix-turn-helix, Psq domain
      0.094   13.0   0.0       0.16   12.3   0.0    1.4  1  NUMOD1    NUMOD1 domain


Domain annotation for each model (and alignments):
>> HTH_psq  helix-turn-helix, Psq domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   4.8e-06     0.043      15      35 ..      22      44 ..      15      50 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.8e-06
     HTH_psq 15 Gk.mSirkAArkYgiPrsTLw.r 35
                G   Sir+AA+  giP  TLw  
  KHJ32344.1 22 GTyRSIREAADANGIPMATLWeQ 44
                55569****************44 PP

>> NUMOD1  NUMOD1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.7e-05      0.16       7      25 ..      14      33 ..      13      43 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.7e-05
      NUMOD1  7 Dlntkt.igkFsSireAaky 25
                ++ t + +g+++SireAa++
  KHJ32344.1 14 NIVTRLcNGTYRSIREAADA 33
                66777778**********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       316  (0.0176251); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.26s 00:00:00.59 Elapsed: 00:00:00.39
# Mc/sec: 556.44
//
Query:       KHJ32345.1  [L=508]
Description: putative c2h2 type zinc finger containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.4e-34  116.8  15.7    7.6e-30  103.2   1.7    3.6  4  zf-C2H2_2    C2H2 type zinc-finger (2 copies)
    6.9e-06   26.2  22.4    0.00011   22.3   2.6    4.3  4  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
    7.6e-05   23.0  10.0    0.00022   21.5   1.8    3.0  2  zf-met       Zinc-finger of C2H2 type
     0.0067   16.7   3.0        2.5    8.3   0.2    2.6  2  AKAP95       A-kinase anchoring protein 95 (AKAP95)
  ------ inclusion threshold ------
       0.01   16.6  17.3        1.9    9.5   0.4    4.8  5  zf-C2H2_4    C2H2-type zinc finger
       0.02   15.4   0.4       0.02   15.4   0.4    4.4  4  zf-C2H2      Zinc finger, C2H2 type
       0.21   12.0   3.5         11    6.5   0.6    3.3  2  zf-C2HE      C2HE / C2H2 / C2HC zinc-binding finger


Domain annotation for each model (and alignments):
>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.2   0.00033      0.85      51      77 ..       7      33 ..       3      43 .. 0.88
   2 !   12.7   0.3   4.6e-05      0.12      48      80 ..      69     101 ..      45     117 .. 0.73
   3 !  103.2   1.7     3e-33   7.6e-30       2      99 ..     195     291 ..     193     294 .. 0.96
   4 ?   -3.7   0.1       6.3   1.6e+04      65      82 ..     352     369 ..     347     381 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00033
   zf-C2H2_2 51 leClyCekefkslealreHmkkkgHck 77
                ++C  C+  fk+ +  +eHm+++ H+ 
  KHJ32345.1  7 YTCNSCQIAFKNSDLQKEHMRSEWHRY 33
                68***********************86 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 4.6e-05
   zf-C2H2_2  48 eekleClyCekefkslealreHmkkkgHckine 80 
                   + +C  C+++  s +a r+H+ +++H++   
  KHJ32345.1  69 AFQKTCAACDRTYFSENAHRNHLGSQKHKNNIA 101
                 33689*******77**************98533 PP

  == domain 3  score: 103.2 bits;  conditional E-value: 3e-33
   zf-C2H2_2   2 ClfcekkskeveellehmskkhgffipereylvdleglleylrekieekleClyCekefkslealreHmkkkgHckineeeeeekkeiekfydflskd 99 
                 Clfc+  s+++  ++ hm+k hg+fiper+ylvdlegl++y  eki+++++C+yC+k ++s+  l++Hm++kgHcki+  +eee+ ei ++ydf+s +
  KHJ32345.1 195 CLFCNLDSQSLGLNVIHMQKLHGMFIPERKYLVDLEGLVNYFYEKINDDHQCIYCGKLKQSIFGLQTHMRDKGHCKIPFFTEEEQLEIGEYYDFTS-T 291
                 *******999************************************************************************************54.4 PP

  == domain 4  score: -3.7 bits;  conditional E-value: 6.3
   zf-C2H2_2  65 alreHmkkkgHckineee 82 
                 + ++H ++ +H ++++ +
  KHJ32345.1 352 DKETHENQVDHGQMAYLD 369
                 456777777777777644 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.6   4.5e-06     0.012       2      27 .]       7      32 ..       6      32 .. 0.95
   2 !   22.3   2.6   4.4e-08   0.00011       3      27 .]      73      97 ..      71      97 .. 0.95
   3 ?   -4.0   0.3         7   1.8e+04       4       8 ..     195     199 ..     194     199 .. 0.87
   4 ?    1.0   0.7      0.23   5.8e+02       4      26 ..     246     268 ..     244     268 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.5e-06
                 CBBTTTTBBBSSHHHHHCCTTSHHHH CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHlkSKkHK 27
                 + C  C+  Fk++   ++H++S +H+
   KHJ32345.1  7 YTCNSCQIAFKNSDLQKEHMRSEWHR 32
                 78***********************7 PP

  == domain 2  score: 22.3 bits;  conditional E-value: 4.4e-08
                 BBTTTTBBBSSHHHHHCCTTSHHHH CS
  zf-C2H2_jaz  3 YCvlCdKyFksenaldnHlkSKkHK 27
                  C +Cd+++ sena +nHl S kHK
   KHJ32345.1 73 TCAACDRTYFSENAHRNHLGSQKHK 97
                 6***********************9 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 7
                  BTTTT CS
  zf-C2H2_jaz   4 CvlCd 8  
                  C  C+
   KHJ32345.1 195 CLFCN 199
                  999*8 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.23
                  BTTTTBBBSSHHHHHCCTTSHHH CS
  zf-C2H2_jaz   4 CvlCdKyFksenaldnHlkSKkH 26 
                  C++C K  +s   l++H++ K H
   KHJ32345.1 246 CIYCGKLKQSIFGLQTHMRDKGH 268
                  99999988888888999988777 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   1.4     0.013        34       1      25 []       7      31 ..       7      31 .. 0.90
   2 !   21.5   1.8   8.5e-08   0.00022       2      25 .]      73      96 ..      72      96 .. 0.97

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.013
      zf-met  1 fyCelCnvtfnsesqlksHlqGKkH 25
                ++C+ C++ f++    k H+++  H
  KHJ32345.1  7 YTCNSCQIAFKNSDLQKEHMRSEWH 31
                89**********9999999999777 PP

  == domain 2  score: 21.5 bits;  conditional E-value: 8.5e-08
      zf-met  2 yCelCnvtfnsesqlksHlqGKkH 25
                +C +C++t+ se++ ++Hl ++kH
  KHJ32345.1 73 TCAACDRTYFSENAHRNHLGSQKH 96
                7*********************** PP

>> AKAP95  A-kinase anchoring protein 95 (AKAP95)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.2   0.00097       2.5       1      59 [.       7      66 ..       7      73 .. 0.78
   2 !    8.3   0.3   0.00098       2.5       2      38 ..      73     110 ..      70     149 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00097
      AKAP95  1 FtCslCKfrtfeekei.ekHleskfHketlkyiqtkldkkvve.Fleeylvnkfkkteerr 59
                +tC  C+   f+++++ ++H++s+ H+  lk   t l+   ++ F+e +l+ +++ t++  
  KHJ32345.1  7 YTCNSCQIA-FKNSDLqKEHMRSEWHRYNLKRRITSLPSISLDlFVEKVLQAQAHSTAAAT 66
                689999975.566665168**************9*****9999677788888888877655 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00098
      AKAP95   2 tCslCKfrtfeekeiekHleskfHketlkyi.qtkldk 38 
                 tC+ C    f e+   +Hl s+ Hk+ +  + +++++k
  KHJ32345.1  73 TCAACDRTYFSENAHRNHLGSQKHKNNIASMrDNEIEK 110
                 69999999999999999999999999998886555544 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.2    0.0017       4.4       1      22 [.       7      28 ..       7      30 .. 0.79
   2 ?    6.3   0.3     0.008        21       2      21 ..      73      92 ..      72      95 .. 0.88
   3 ?    2.5   0.2      0.13   3.4e+02       2      24 .]     194     216 ..     193     216 .. 0.79
   4 ?    9.5   0.4   0.00076       1.9       1      21 [.     244     264 ..     244     266 .. 0.94
   5 ?   -3.8   0.0         7   1.8e+04       5      13 ..     268     276 ..     268     278 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0017
   zf-C2H2_4  1 fkCpiCgksFsskkaLlr.Hlkt 22
                ++C  C+  F++++  ++ H+++
  KHJ32345.1  7 YTCNSCQIAFKNSDL-QKeHMRS 28
                89********65555.555**97 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.008
   zf-C2H2_4  2 kCpiCgksFsskkaLlrHlk 21
                +C  C++++ s +a ++Hl 
  KHJ32345.1 73 TCAACDRTYFSENAHRNHLG 92
                6999**************85 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.13
   zf-C2H2_4   2 kCpiCgksFsskka.Llr.HlkthH 24 
                 +C +C  +  s++  L+  H+++ H
  KHJ32345.1 194 RCLFC--NLDSQSLgLNViHMQKLH 216
                 69999..776666679888**9988 PP

  == domain 4  score: 9.5 bits;  conditional E-value: 0.00076
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlk 21 
                 ++C +Cgk   s  +L++H++
  KHJ32345.1 244 HQCIYCGKLKQSIFGLQTHMR 264
                 69******************8 PP

  == domain 5  score: -3.8 bits;  conditional E-value: 7
   zf-C2H2_4   5 iCgksFssk 13 
                 +C+ +F + 
  KHJ32345.1 268 HCKIPFFTE 276
                 799999775 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.4   7.6e-06      0.02       1      23 []       7      31 ..       7      31 .. 0.93
   2 ?   -0.6   0.1      0.92   2.3e+03       2      12 ..      73      83 ..      73      92 .. 0.77
   3 ?    0.2   0.3       0.5   1.3e+03       2      23 .]     194     216 ..     194     216 .. 0.84
   4 ?   -1.1   1.9       1.3   3.3e+03       3      21 ..     246     264 ..     244     268 .. 0.62

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 7.6e-06
                EEETTTTEEESSHHHHHHHHHC..C CS
     zf-C2H2  1 ykCpdCgksFkrksnLkrHirt..H 23
                y+C+ C   Fk++++ k H+r+  H
  KHJ32345.1  7 YTCNSCQIAFKNSDLQKEHMRSewH 31
                9********************8666 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.92
                EETTTTEEESS CS
     zf-C2H2  2 kCpdCgksFkr 12
                +C  C++++ +
  KHJ32345.1 73 TCAACDRTYFS 83
                6999**99865 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.5
                 EETTTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   2 kCpdCgksFkrksnLkrHirt.H 23 
                 +C  C+    +  + + H+++ H
  KHJ32345.1 194 RCLFCNLDSQSLGLNVIHMQKlH 216
                 58888888888888999**9999 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 1.3
                 ETTTTEEESSHHHHHHHHH CS
     zf-C2H2   3 CpdCgksFkrksnLkrHir 21 
                 C +Cgk   +   L++H+r
  KHJ32345.1 246 CIYCGKLKQSIFGLQTHMR 264
                 5566665555566888888 PP

>> zf-C2HE  C2HE / C2H2 / C2HC zinc-binding finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.6    0.0044        11      36      63 ..       5      31 ..       2      32 .. 0.82
   2 ?    4.4   0.1      0.02        50      34      58 ..     240     263 ..     210     266 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0044
     zf-C2HE 36 tpLkCtrCganfgnkfpkLKeHLeeefe 63
                +p +C++C+   +++    KeH  +e+ 
  KHJ32345.1  5 HPYTCNSCQ-IAFKNSDLQKEHMRSEWH 31
                799******.66666677799*999996 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.02
     zf-C2HE  34 lktpLkCtrCganfgnkfpkLKeHL 58 
                  +++ +C +Cg + ++++  L  H 
  KHJ32345.1 240 INDDHQCIYCG-KLKQSIFGLQTHM 263
                 488999*****.9999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1025  (0.0571699); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.38
# Mc/sec: 4005.78
//
Query:       KHJ32346.1  [L=323]
Description: hypothetical protein EV44_g4565 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2402.47
//
Query:       KHJ32347.1  [L=863]
Description: putative bio3 -diamino-pelargonic acid aminotransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.4e-41  141.3   0.0    7.9e-19   67.6   0.0    3.4  3  Aminotran_3  Aminotransferase class-III
    5.8e-16   58.9   0.0    9.7e-16   58.2   0.0    1.3  1  AAA_26       AAA domain


Domain annotation for each model (and alignments):
>> Aminotran_3  Aminotransferase class-III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.6   0.0   8.8e-23   7.9e-19      30     163 ..     336     473 ..     327     504 .. 0.84
   2 !    7.1   0.0   0.00021       1.8     175     216 ..     549     591 ..     506     599 .. 0.74
   3 !   62.4   0.0   3.3e-21     3e-17     229     312 ..     624     714 ..     619     723 .. 0.94

  Alignments for each domain:
  == domain 1  score: 67.6 bits;  conditional E-value: 8.8e-23
                  EESSHHHHTTTT-BT-HHHHHHHHHHHTT-S---TTTCEEHHHHHHHHHHHHHCT-...SEEEEESSHHHHHHHHHHHHHHHHHHTS....HCTT-EE CS
  Aminotran_3  30 lDlvssiavvnlGhahPkvvkavkeqaaklshvsfgaltnepalklaekllklapk.gldkvflansGseAvetAlKlarkyarekk....atektki 122
                   D  +s++   lGha+P ++ a++++a    hv+f+   ++pal la+ ll+ + +  l+kvf+ ++Gs  ve+A+K+a + + e+     at+   +
   KHJ32347.1 336 FDGSASWWTQGLGHASPSLALAAAHAAGRYGHVMFAGNIHQPALTLADSLLRNLENpRLSKVFFSDNGSTGVEVAIKMALSASSERYgistATQEIGV 433
                  6999**********************************************665543269**********************8888767777888889* PP

                  EEETTT---SSHHHHHHSS--TTTTTTCTTB-TSEEEE-TT CS
  Aminotran_3 123 iafkgafHGrtlgalsvtgskkkyktlfgpflpevvrlkyp 163
                  i +kg++HG+t ga+  +++ ++ +++++      + +++p
   KHJ32347.1 434 IGLKGSYHGDTIGAMDCSEP-SIFNKKVHWYKGRGYWFEFP 473
                  ***************99999.88888877666666655555 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.00021
                  HHHHHHHHHHHHCHTCCCEEEEEE-S.CETTTTSEB--CCHHH CS
  Aminotran_3 175 eaalleelealekkkkdevaAvivEp.iqgegGvvvaspefla 216
                  ++ + + l++l++ +  +  A+i+Ep   g+gG+  ++p f +
   KHJ32347.1 549 RTYIVKSLQKLIRDEGLKFGALIMEPiLLGAGGMQLVDPLFQH 591
                  455778889999999999********778******99998865 PP

  == domain 3  score: 62.4 bits;  conditional E-value: 3.3e-21
                  EEEE-TTTTTTTTSSSSGGGGCTS--SEEEE-GGGGTT.SS-EEEEEEHHHHTTS-TTS......B--TTTT-HHHHHHHHHHHHHHHHTT CS
  Aminotran_3 229 livDEvqtGfGrTGklfAlehagvspDlmtlaKaltgG.lplsavlataevmqalapgs......hgsTfgGnplacavalavleiieeek 312
                  +i+DEv tG+ r G + A+  +g++pD+ + aK ltgG  pl +++a + ++qa+ ++s      hg+++++ p+ c va+ +++i+++ +
   KHJ32347.1 624 VIFDEVFTGLYRLGRFSAASFLGIHPDISVHAKLLTGGlVPLCCTVASESIYQAFISDSkadsllHGHSYTAHPVGCHVANTSIQILNNLD 714
                  7**************99*9999*********************************99999***************************9865 PP

>> AAA_26  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.2   0.0   1.1e-19   9.7e-16       4     181 ..      33     218 ..      30     225 .. 0.80

  Alignments for each domain:
  == domain 1  score: 58.2 bits;  conditional E-value: 1.1e-19
      AAA_26   4 fvtgtdtgvGKTvvslgLvralkrkg..vkvgyfKPiqtgieededselikellgldqtyelpeplalsaplspelaarqeg......edidlekiv.. 92 
                  v g  t+vGKT++s++L++al++k+   ++ y+KPi+tg  ++ d+ +i+++   ++t + +    +++++sp++aar ++            + v  
  KHJ32347.1  33 QVYGANTNVGKTIISTILCKALDNKNlaEQTWYLKPISTGPDDQADDLHITKFSPRTKTKC-L--HKYESAVSPHIAARSKTskpvsdS-----Q-Vrh 122
                 58899*****************9987225699*********99999999988764443333.3..455777999999998874444221.....2.124 PP

      AAA_26  93 ......ke.lekdadivvVEGagglgvpiteellnadiaknlgapvilVargglgtinqllltiealrqknvrvlGvilNkvrnpenvetlekksg 181
                       k+  ++ +  ++ E agg+ +p  +++l+ d+ ++l++pv lVa + lg i  ++ + e+l+ ++ +v  v l + ++ +n+e l+++++
  KHJ32347.1 123 eilahiKScAQEGQGTLLLETAGGVNSPGPSGTLQGDLYQALRLPVFLVADSVLGGISTTISAFESLHIRGYKVDTVFLFENQAFRNHEYLQEYFK 218
                 445666552666789*****************************************************9999999999998555578888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (863 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 6007.11
//
Query:       KHJ32348.1  [L=623]
Description: putative secreted effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.043   13.2   2.9      0.068   12.6   2.9    1.2  1  FliD_C    Flagellar hook-associated protein 2 C-terminus


Domain annotation for each model (and alignments):
>> FliD_C  Flagellar hook-associated protein 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.9   3.8e-06     0.068      38      78 ..     141     181 ..     130     197 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.8e-06
                 CE-EEEEEEC-SCCCCCCHCHH.HHHHHHCCCCCCCCCS..- CS
      FliD_C  38 geeltlsvetDtdkikealkeF.VdaYNalvteinektkeke 78 
                  +e  +s + D+dk  ++lkeF V++YN++ +e+n++   ++
  KHJ32348.1 141 PQESDVSLNFDIDKEIDNLKEFnVQNYNNIFEEFNAQEY-DN 181
                 456899******************************987.33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (623 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 4585.07
//
Query:       KHJ32349.1  [L=511]
Description: hypothetical protein EV44_g1674 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
     0.0027   16.9   0.0     0.0055   15.9   0.0    1.5  1  Fibrillarin  Fibrillarin
  ------ inclusion threshold ------
        1.5    8.6   6.2         11    5.8   0.1    3.9  4  DASH_Duo1    DASH complex subunit Duo1


Domain annotation for each model (and alignments):
>> Fibrillarin  Fibrillarin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   6.1e-07    0.0055      34      98 ..     128     192 ..     103     197 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 6.1e-07
                  SSEEEEETTEEEEEE-TTTSHHHHHHHTT-S--S--TTSEEEEESTTTSHHHHHHHHHHTTTSEE CS
  Fibrillarin  34 gEklikveeeEyRvWnpfrsKlaaailkglkelpikkgskvLYlGaasGttvsHvsDivgeegvv 98 
                  +  + + e+   R W+  +s ++a+i   +++l  k+ ++v Yl ++   +   vs++++++ ++
   KHJ32349.1 128 NQVRCQAEKAQLRKWEVEKSCISASISDLVQSLIYKSSDQVQYLKTSDVNSKQAVSNVLQSDDRI 192
                  4557788899*************************************999999999999887665 PP

>> DASH_Duo1  DASH complex subunit Duo1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.7      0.01        90       4      42 ..      91     129 ..      88     130 .. 0.86
   2 ?    5.8   0.1    0.0013        11       2      38 ..     186     222 ..     185     228 .. 0.87
   3 ?   -2.8   0.0      0.61   5.5e+03       2      10 ..     263     271 ..     262     281 .. 0.76
   4 ?   -1.8   0.0      0.31   2.8e+03      16      32 ..     309     325 ..     303     339 .. 0.47

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.01
   DASH_Duo1   4 kEleqLrkinevienviesLkkaksniervketvestnt 42 
                   +++Lrk  ++ie+  ++L+  ks ++ ++++ + +n+
  KHJ32349.1  91 TAINELRKSTSMIEKQCKTLRMQKSALSGLSKNFKRANQ 129
                 567899999*************99999999999998886 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0013
   DASH_Duo1   2 LekEleqLrkinevienviesLkkaksniervketve 38 
                 L+ + + L ++ + ++n++++L + +++iervk  + 
  KHJ32349.1 186 LQSDDRILSSFQKLLSNLDDNLPENQEKIERVKDLCA 222
                 77788899999*********************98776 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 0.61
   DASH_Duo1   2 LekEleqLr 10 
                 L++Ele+L 
  KHJ32349.1 263 LQEELESLY 271
                 899999985 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 0.31
   DASH_Duo1  16 ienviesLkkaksnier 32 
                 i+ +++sL + ++ ie 
  KHJ32349.1 309 IQYIENSLSTLTDRIEA 325
                 33333333333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (511 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1642  (0.0915835); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.38
# Mc/sec: 4029.69
//
Query:       KHJ32350.1  [L=302]
Description: hypothetical protein EV44_g3423 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       622  (0.0346924); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2270.52
//
Query:       KHJ32351.1  [L=561]
Description: hypothetical protein EV44_g3102 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00039   20.4   2.6    0.00069   19.6   2.6    1.4  1  zf-CCHC    Zinc knuckle
  ------ inclusion threshold ------
          1    9.3   4.5        1.9    8.4   4.5    1.5  1  zf-CCHC_2  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   2.6   7.7e-08   0.00069       2      18 .]     434     450 ..     433     450 .. 0.94

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 7.7e-08
                 CTSSSSSSSSTTTTSTS CS
     zf-CCHC   2 kCynCGepGHiardCpk 18 
                  Cy C + GH++r Cp+
  KHJ32351.1 434 RCYICRNQGHWSRSCPN 450
                 7***************6 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   4.5   0.00021       1.9       6      21 .]     435     450 ..     434     450 .. 0.94

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00021
   zf-CCHC_2   6 ChiCgkkGHyIqdCPt 21 
                 C iC + GH+ ++CP+
  KHJ32351.1 435 CYICRNQGHWSRSCPN 450
                 99*************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (561 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3800.02
//
Query:       KHJ32352.1  [L=124]
Description: putative nuclear transport factor 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-32  113.2   0.1    1.2e-32  113.0   0.1    1.0  1  NTF2      Nuclear transport factor 2 (NTF2) domain


Domain annotation for each model (and alignments):
>> NTF2  Nuclear transport factor 2 (NTF2) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.0   0.1   6.5e-37   1.2e-32       1     119 [.       7     120 ..       7     121 .. 0.97

  Alignments for each domain:
  == domain 1  score: 113.0 bits;  conditional E-value: 6.5e-37
                 HHHHHHHHHHHHHHHHGGGGGGGGEEEEEEEEEETTEEEEESHHHHHHHHHHSSCSCEEEEEEEEEEEETSEGGGCEEEEEEEEEEEETTSCCEEEEEE CS
        NTF2   1 vakafvqqYYaaldagdregllalyaadaslltpegsspvkgreaIteffrslpftrielkittvdaqpdeaslstgvlvmvtGelkvddfkkrrkfsq 99 
                 +a++f+q YY+ +d  dr++l+ ly +d+s+lt+e s +v+g+ +I+e++ slpf++++++itt+daqp+   l++g+l+ vtG+l +++++++++f+q
  KHJ32352.1   7 IAQEFTQFYYNQFDL-DRSTLATLY-RDESMLTFETS-SVQGAVNIVEKLCSLPFSKVKHDITTLDAQPS--GLHRGILILVTGRLLLEEEERPMNFTQ 100
                 689************.*********.***********.******************************94..589****************988***** PP

                 EEEEEEETTTEEEEEEEEEE CS
        NTF2 100 tfilapqsnkgyfvlnDifr 119
                 +f l+p++ ++yfv nDif 
  KHJ32352.1 101 VFQLNPNGAGSYFVYNDIFK 120
                 ******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       363  (0.0202465); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 915.82
//
Query:       KHJ32353.1  [L=887]
Description: putative protein impact protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.8e-119  400.7  30.9   3.5e-118  396.5  30.9    2.1  1  Aim21     Altered inheritance of mitochondria protein 21


Domain annotation for each model (and alignments):
>> Aim21  Altered inheritance of mitochondria protein 21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  396.5  30.9    2e-122  3.5e-118       1     723 [.      28     877 ..      28     879 .. 0.85

  Alignments for each domain:
  == domain 1  score: 396.5 bits;  conditional E-value: 2e-122
       Aim21   1 pkvPpRP.srridrSvsPnpdsfapsPLne............slsktssed....vpsrppSvelpslgeegaeyealeeaeases.stPaqtrnvaed 81 
                 pk+P RP  +r++rS sP+++++a+sPL +              s++ s+           S  lps+g+eg ey+++   + ++  +  ++++ v+++
  KHJ32353.1  28 PKIPSRPsDKRLGRSISPSQENYARSPLTKaplnlnkdpdgnHHSANYSTRftdtENCHQLSIRLPSIGQEGTEYADVYISQDENLnKLSLNNKDVNNS 126
                 9*************************************7766333333333554444445699**************98766655525567799***** PP

       Aim21  82 lklhapkPslpsssakarvqavtrtdssqaaaaGlGrasspedrdvrkrssrsleskasassadSsassterptsiavekdehgipeigqrvPmypnag 180
                  +   p P  p+s+ k+  ++++ +d          r +s           ++ + +   +s++S +            k+ +gip ig  vPmypnag
  KHJ32353.1 127 DQFLKPGPTNPNSEVKSLASTMDHKDF---------RKESV---------IATSNVNNGIDSQVSDS---------C--KNTQGIPQIGLFVPMYPNAG 196
                 **************************4.........22222.........11112222334444444.........2..6779**************** PP

       Aim21 181 dVqapsPspysseasd......qrsgrsHeRkkSgre.slPpgsygLhghgvipndkfekawyekhpeelkkeeakeygpvvgeerprdwalssddlnk 272
                 dVqaps s + s  +d      ++  +  + +  gr+ ++P++ yg  ghg i++d f+ka+y khpe +kke  ++     ge rp +walss+dlnk
  KHJ32353.1 197 DVQAPSQSLAISTVPDtstdynKAESKYFSQRLNGRGqEIPSDAYGRYGHGFISQDLFDKAYYKKHPELFKKEIGSY-----GEMRP-EWALSSEDLNK 289
                 *******999888887889998888888899999***************************************9995.....789**.*********** PP

       Aim21 273 iVketAstgvGlgtskevvstpeEqvgyiaseeytsRlsspapqsss.................................................... 319
                 iV++tA++g G+g s +    p+Eqvg+  seey  R+ssp++q +                                                     
  KHJ32353.1 290 IVQDTATNGTGIGSSTASFAAPSEQVGFKVSEEYICRISSPKSQPQPhtshsnitefqdmtpsvrklstttlnlkveasrsisqipeqknvtlensqds 388
                 ******************************************99888889************************************************* PP

       Aim21 320 .vihiDeprhr............sepssesgeeeedateergkeepilasDevakesakee..pavspsaereesvkyeakereesvpesreeskpasi 403
                  vihi +p ++            +   +e   e e+ + ++ +++pila Devak++   e  pav p  ++ e++ +e    ++ ++   + sk   +
  KHJ32353.1 389 dVIHISDPLRSsneinraarlssATDIVEYNTEFEKIDDDHQYKAPILAPDEVAKQPLDRElqPAVFPMNKNIENFREE-PIYTPLTTYCNSLSKNLAT 486
                 *********999******999985555666666777789*******************99999*****99999776666.6677778888999999999 PP

       Aim21 404 eesvpseaehtpledveEyEplfpedeseeavkkatees.srlkrpetekhrfpsedvwedsPsslqltatvstpe........vakkrafetPeqeta 493
                  e  p ++ ++p+ed + yEplfpe+e+ ++     + s + lkr   + +rfp +dvwed+Psslq+t+tvs p+        + k+   etP q++a
  KHJ32353.1 487 AEGSPCSTPSIPQEDFNRYEPLFPEEEKASLNDHNPSRSlEILKRF-EMSQRFPGQDVWEDTPSSLQYTTTVSAPQlpeekkinECKELGTETPAQAFA 584
                 999**************************98876555551555566.5899*************************999999877788889******** PP

       Aim21 494 rsseelaeke........ekkll....ksedkkerpelakqrfpsrdvweDapesqelettvetpq...................eevkekspevp.tK 560
                 r++e+ ae+         ekk +     + ++k+ +e ++ rfpsrd+weD+p+s  l+ttv   q                   + + +ks ++  t 
  KHJ32353.1 585 RRQEKMAEQGvrdnifhqEKKNQfesnGQTESKSLFETTNHRFPSRDIWEDTPDSLLLQTTVANTQievetsnldseqkstlsreNSKSRKSNGILtTN 683
                 ***9999988999***97333335565777888889999************************99*****************99877778888887566 PP

       Aim21 561 psiPa.rPe...........................ipvrpskksvtsptekkkpPpiPkkpkPqIparpakaseeeskeesadaa.......vkakPk 624
                 +s  + +Pe                             +++ ++   ++  k++  ++  k+kPq+parpa   +++s+    + +        k kP+
  KHJ32353.1 684 ESLDNrKPEnklnleststihsttldstisqesslsSRQEALENI-VKNSIKNHTSSVQIKAKPQVPARPARLISSNSSGSLSTCSnpslevtGKIKPQ 781
                 777768899999999999999999999999988865222222222.233334555568888888888888888888888744444466777779***** PP

       Aim21 625 vparpggskiaalragFlkdLnsrLklGPqapkkkeekeekgeaeekeepkekapLsdaRkgRarGParRkPAae..kvvatekkvvaatvsivepvsv 721
                 +p+rp g+kiaal++gF+ dLn+rL+lGPq    ke +++    e ++ +k++apL d Rk+RarGP rR+P +   + + ++++++ + + i+++ ++
  KHJ32353.1 782 IPSRPVGGKIAALQGGFMMDLNKRLQLGPQPSR-KEIPKD----EYQNVEKDNAPLLDPRKSRARGPVRRAPNKAqlTNSVPTNLPKEKDMGISQTLTI 875
                 ******************************776.777777....789999**********************77789889999**************** PP

       Aim21 722 wk 723
                 w+
  KHJ32353.1 876 WS 877
                 97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (887 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       791  (0.0441185); expected 358.6 (0.02)
Passed bias filter:                      262  (0.0146132); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.30s 00:00:01.00 Elapsed: 00:00:00.45
# Mc/sec: 5889.27
//
Query:       KHJ32354.1  [L=808]
Description: putative primase zinc finger [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-19   69.6   2.0    2.7e-19   68.7   2.0    1.5  1  zf-primase       Primase zinc finger
  ------ inclusion threshold ------
      0.057   13.4   0.0       0.13   12.2   0.0    1.6  1  tRNA_anti-codon  OB-fold nucleic acid binding domain
        1.5    7.6   4.5       0.29    9.9   0.3    1.8  2  LptF_LptG        Lipopolysaccharide export system permease Lp


Domain annotation for each model (and alignments):
>> zf-primase  Primase zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.7   2.0   4.5e-23   2.7e-19       1      46 []     509     554 ..     509     554 .. 0.99

  Alignments for each domain:
  == domain 1  score: 68.7 bits;  conditional E-value: 4.5e-23
  zf-primase   1 GrskDlglCkatkkdgkkCgswvnkrkgeyCdfHvqsavkkarakR 46 
                 G+++Dlg+Ck++k+dgk C+swvnkr++e+C++Hv+++++k++a+R
  KHJ32354.1 509 GTARDLGFCKSVKRDGKICNSWVNKRHTEFCEYHVSARLNKTHASR 554
                 9******************************************998 PP

>> tRNA_anti-codon  OB-fold nucleic acid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.2e-05      0.13      11      54 ..     428     476 ..     415     499 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.2e-05
                      E......EEEETTEEEEEEEETTEEEEEEEETHHHHHHHTTS-TTSEEEE CS
  tRNA_anti-codon  11 s......drsggkvifidlrDgtgriqvvlfreeatklaenlkeGdvvrv 54 
                      s      +++ gk++ ++l+D   +++ +lf+ +a++ + + ++G+++ +
       KHJ32354.1 428 ShrtgleKQKRGKFMAFTLTDLKWELEFYLFD-SAFEKFWKMTPGTIIAI 476
                      05556667999*********************.**************988 PP

>> LptF_LptG  Lipopolysaccharide export system permease LptF/LptG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.4      0.19   1.2e+03     229     272 ..     234     280 ..     209     360 .. 0.54
   2 ?    9.9   0.3   4.9e-05      0.29     117     187 ..     570     646 ..     567     726 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.19
   LptF_LptG 229 inldpadlsteeespdelslsel...kekikalrsegle.vrryrael 272
                 +n++ a +++e+++  +l   +    k ++ ++++++l+  + +++e+
  KHJ32354.1 234 FNERLAAVRRESKND-QLRQIQReksKSSAFDIDQNQLRdLKNHAVEF 280
                 555545555544442.22221111112222222222222333333333 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 4.9e-05
   LptF_LptG 117 vPwankkaesllseirqkspsllikpgvfikdgdgyiiyvgsmddeggelqdvtiydlt.........egkgltsiitAk 187
                 + ++nk+++s+ s+ r  + s+ i++++f+ + ++  ++ +++++  ++l dv   d++         +++++t++i++k
  KHJ32354.1 570 KSQGNKNFHSINSKSRGINVSSNIENNTFYDQFNHSRVFLSQKRNTARLLDDV---DFDpdgfhrgstKEERMTKRILSK 646
                 5689*******************************99999999999999***9...544445555555556666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (808 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       952  (0.0530983); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 5476.96
//
Query:       KHJ32355.1  [L=108]
Description: putative golgi apparatus membrane protein tvp18 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-33  115.5   4.1    1.7e-33  115.3   4.1    1.0  1  Cg6151-P  Uncharacterized conserved protein CG6151-P
  ------ inclusion threshold ------
        0.2   11.3   2.5       0.13   11.9   0.3    1.7  2  PRA1      PRA1 family protein


Domain annotation for each model (and alignments):
>> Cg6151-P  Uncharacterized conserved protein CG6151-P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.3   4.1   1.9e-37   1.7e-33      25     113 .]       2      90 ..       1      90 [. 0.99

  Alignments for each domain:
  == domain 1  score: 115.3 bits;  conditional E-value: 1.9e-37
    Cg6151-P  25 ivfsilalvsgfvvlfiEvPlllricptsskfdefiekfetnwmraalYlvmavvqwlslivqatslivaavlllltgvlYglaalkkq 113
                 i+f++++l+s+f+++f+E+Pll+ricptsskfd+f+++f+tn+mraa+Yl+m++ qwlsli + +sl++aa++l+l++v+Y+la+lk+q
  KHJ32355.1   2 IIFGAICLASSFLIIFVEIPLLMRICPTSSKFDSFMRRFSTNYMRAAIYLGMGMAQWLSLIGEPSSLLAAAIMLTLAAVFYALAGLKGQ 90 
                 9**************************************************************************************98 PP

>> PRA1  PRA1 family protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.9     0.055     5e+02      28      28 ..      30      30 ..       1      50 [. 0.47
   2 ?   11.9   0.3   1.4e-05      0.13      35      78 ..      37      85 ..      26     107 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.055
        PRA1 28 t 28
                +
  KHJ32355.1 30 S 30
                1 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 1.4e-05
        PRA1 35 llyfrtNYlivv.....llvlllslltnplslivllllvlawlflyflr 78
                ++ f+tNY+  +      ++  lsl+ +p sl+++++++ +++++y l 
  KHJ32355.1 37 MRRFSTNYMRAAiylgmGMAQWLSLIGEPSSLLAAAIMLTLAAVFYALA 85
                67899***977745555677889***************99999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       533  (0.0297284); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 836.36
//
Query:       KHJ32356.1  [L=2274]
Description: putative acetyl- carboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   9.5e-283  939.9   0.0   1.2e-282  939.6   0.0    1.1  1  ACC_central      Acetyl-CoA carboxylase, central region
   9.6e-185  614.9   0.0   1.5e-184  614.3   0.0    1.3  1  Carboxyl_trans   Carboxyl transferase domain
      7e-52  176.0   0.0    1.3e-51  175.1   0.0    1.4  1  CPSase_L_D2      Carbamoyl-phosphate synthase L chain, ATP bi
    6.6e-28   97.5   0.1    1.3e-27   96.5   0.1    1.6  1  Biotin_carb_N    Biotin carboxylase, N-terminal domain
    2.2e-22   79.2   0.0    2.2e-19   69.5   0.0    2.9  2  Biotin_carb_C    Biotin carboxylase C-terminal domain
    1.9e-17   62.9   0.0    1.6e-16   59.8   0.0    2.4  2  Biotin_lipoyl    Biotin-requiring enzyme
     0.0061   16.6   0.0       0.02   14.9   0.0    1.9  1  ATP-grasp_3      ATP-grasp domain
  ------ inclusion threshold ------
      0.011   15.3   0.0      0.025   14.1   0.0    1.6  1  Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
      0.018   15.2   0.0      0.041   14.1   0.0    1.5  1  GxGYxYP_N        GxGYxY sequence motif in domain of unknown f
      0.081   12.8   0.0       0.27   11.1   0.0    1.9  2  Biotin_lipoyl_2  Biotin-lipoyl like
       0.11   12.2   0.0       0.26   11.1   0.0    1.5  1  ATPgrasp_Ter     ATP-grasp in the biosynthetic pathway with T


Domain annotation for each model (and alignments):
>> ACC_central  Acetyl-CoA carboxylase, central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  939.6   0.0  7.2e-286  1.2e-282       1     733 []     768    1510 ..     768    1510 .. 0.97

  Alignments for each domain:
  == domain 1  score: 939.6 bits;  conditional E-value: 7.2e-286
                   EESXCCCXXXXEBXXSXXXXXX-SS.STTSCHHHHHHHHCHHHHHHHHT-SHTTTCCHHHHHHHHHHTSTCHHHHHHHHHHCCCTTTS-HHHHHHH CS
  ACC_central    1 eLDDpskVkkaepFegqlpelgsptsvvgekphqrlaallsaleniLaGYdnqakiketlkeLievLrdpeLPllelqevlsalsgrlPakleksl 96  
                   +LDDps+Vk+a+ F gqlp++g+p+ vvg+kp+qr+a l+++l niL+G+dnq+++++tl+eLi+vLr+peLP+ e+++++sal++r+P++l +++
   KHJ32356.1  768 ALDDPSRVKQAQTFLGQLPNFGPPQ-VVGTKPAQRFALLHNVLLNILDGFDNQVIMASTLRELIDVLRNPELPYGEWNAQFSALHSRMPNRLATTF 862 
                   69***********************.********************************************************************** PP

                   HHHHHHHHHC..T..SS--HHHHHHHHHHHCTT-TTTTTTTTHHHHSHHHHHHHCCCTTCCHHHHHHCCCCCCCHHHHHHHHHT.ST.-HHHHHHH CS
  ACC_central   97 rkelekaasnitsvlaeFPakqlrkildsflaeltkkadrevlealvqplvqlverYrnGlkghelsvvlsLLeeYlevEklFqdgs.reedvvlk 191 
                   ++++++a+++  +  aeFPak+l+k+l+++l+e+++ +d e+l+ +++pl+++++rY++ +k++e++v+++LLe+Y +vEklF++ + r+e+v+lk
   KHJ32356.1  863 TQVVDRAKQR--K--AEFPAKNLSKLLARYLDENVSPSDVEMLKSTIAPLIEVLDRYAESQKVREYHVFADLLERYAAVEKLFSSRTaRDEEVILK 954 
                   ****999999..7..9*******************999**********************************************8889******** PP

                   HHHH-STCHHHHHHHHHHHHTHHHHHHHHHHHHHHCHCCCCHTCCCCCCCHHHHHCCCT--STTTHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHH CS
  ACC_central  192 LReknkddlakVvdivlShsqvskKnkLilalldelkpekpssselakelrevLkkLasLesketskVaLkArevLiqaklPsleerknqmesilk 287 
                   LR++nkdd+a+V++ivlShs++ +Kn+Lila+lde++p+k++++++a+++r++L+kL++Les++t+kV+LkAre+Liq+++Psleer +qme+il+
   KHJ32356.1  955 LRDENKDDIARVIQIVLSHSRIGAKNNLILAILDEYRPNKSHVGNFAQYFRSALRKLTELESRQTAKVSLKARELLIQCAMPSLEERAAQMEHILR 1050
                   ************************************************************************************************ PP

                   HHHSBSSTTSS-...SS--HHHHHHHHT-SS-SHHHHCCCCCSSSHHHHHHHHHHHHHHHTTTSEEEEEEEEESS..STCEEEEEEE-T---TCGC CS
  ACC_central  288 ssvdesgygesk...repslevlkeLidsettvfDvLpsfFyhsdevvrlaalevYvrraYraYelksiqhheeee.splivewqFklpsshseek 379 
                   ssv+es+yge++   rep+levlke++ds++tvfDvLp fF+h+d++v+laalevYvrraYraY+lk+i++h+e++  p+iv+w+F l++ +++e+
   KHJ32356.1 1051 SSVVESRYGETGwehREPDLEVLKEVVDSKYTVFDVLPLFFAHQDPWVSLAALEVYVRRAYRAYSLKKIEYHNENSdAPFIVSWDFVLRKVGASEF 1146
                   ***********9************************************************************999989**************9999 PP

                   SSS--......SSSSS-B--TT-EEESSTTTS--S-SSSS--EEEEEEEESSCCGHHHHHHCHHCTS--...-----.......----....---- CS
  ACC_central  380 sasss......stsssesesskriasvsdlsslsskseeepkrtGvmvafksledleealdevleefee...skkse.......sseekeeeeees 459 
                   + + +      +++++ ++s++r+as+sd+s+l+++++ ep r+Gv+v++++l+++ee+l ++l+ +++   +  ++       + + k+++  + 
   KHJ32356.1 1147 GLPAQsglatpASNQDFKNSFQRVASISDMSYLVNRESYEPIRKGVIVPVHYLDEAEEYLIRALDILQTlpgR--KKypnglmpDLAGKRKTIPSP 1240
                   9998899999999999***************************************************887432..335799999444445556678 PP

                   -------EEEEEEECETTT-SCCCCCCCCHHHHHHCCCHHHHTTEEEEEEEE--T.S---EEEEEET..TTEEECTTCTS-CCCHHHCTCCCGTTE CS
  ACC_central  460 ssseepinvlnvairsaenaddeellekleeilkelkeeLeaagvrrvTfivgrk.geyPkyfTFrerdeykEdeiiRhiEPalafqLELnrLsnf 554 
                   + +ee++ v+n+a+r+ae+ +d+e+l+++++i+k++k+eL +++vrr+T+i+g+k g+yP yfTFr++ ey+Ed++iRhiEPalafqLEL+rLs+f
   KHJ32356.1 1241 NLDEELTAVVNIAVRDAESIEDNETLARINSIVKDNKSELLSRRVRRLTIICGHKdGSYPGYFTFRGP-EYEEDQSIRHIEPALAFQLELGRLSKF 1335
                   999***************************************************66***********9.*************************** PP

                   EEEEE--SSTTEEEEEEEESS-T....T-EEEEEEEEE-BSS--TTS-HHCHHHHHHHHHHHHHHHHHHH...C--TTBSSEEEEEEEEEEESS-H CS
  ACC_central  555 dikpvptenrqiHlYeavakeeekkevtdkRfFvRaiirhsdlrdkeasaeyliseaerlllealdeLEvaskkeakrtdlnHiFlnfvpeveldp 650 
                    +kpv+tenr+iH+Yeava + e     dkR+F+Ra++r+++lrd++++aeylise++rl++++ld+LE+   ++++++dlnHiF+nf+p++ l+p
   KHJ32356.1 1336 RVKPVFTENRNIHIYEAVANNVE----GDKRYFTRAVVRPGRLRDEIPTAEYLISETDRLMNDILDALEI---IGNNNSDLNHIFINFSPVFPLQP 1424
                   ***********************....*******************************************...*********************** PP

                   HHHHHHCCCHHHHHHHHHHHTTEEEEEEEEEEC-TTT-SEEEEEEEEEETTSSCEEEEEEEEEE-TT.SSEEEEESS..T.-STTS CS
  ACC_central  651 eeveeavrsflerygkRlwrLrVlqaEirivirlsetgkaiplRlvitnesGyvlkielYkEvkdektgevvfksig..k.kgplh 733 
                    eveea+++fler+g+RlwrLrV++aEiri+++++ ++ ++plR+vitn+sGyv+++e+Y+E+k+e++ge+vf+sig  +  g++h
   KHJ32356.1 1425 PEVEEALGGFLERFGRRLWRLRVTGAEIRIICTDPVSSVPYPLRVVITNTSGYVIQVEMYAERKSENNGEWVFHSIGgtTtIGSMH 1510
                   ****************************************************************************9974599998 PP

>> Carboxyl_trans  Carboxyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  614.3   0.0  9.2e-188  1.5e-184       1     493 [.    1612    2166 ..    1612    2167 .. 0.97

  Alignments for each domain:
  == domain 1  score: 614.3 bits;  conditional E-value: 9.2e-188
                      SSCTTCEEEEEEEEHTTSGGGEBEHHHHHHHHHHHHHHHHHT..EEEEEEEESBETTEEHHHHTTEEEEESSTTSGGGCEEECHHHHHHHHH. CS
  Carboxyl_trans    1 kehprGkltareridllldpgsFgeledlffhrvtelgrkkklprdgvvtgsGaviGravevvaqdktvlggslgpakgekllkaqeeaika. 92  
                      +e+prG+++++ ++d+++++gsFg+ ed ff+++tel+rk+++pr++++++sGa+iG+a e+++++++++ ++ +p++g+k+l+    a k  
      KHJ32356.1 1612 PEYPRGRKFVIVANDITFKIGSFGPKEDQFFYKCTELARKHGIPRIYLSANSGARIGMAQELIPHFNVAWCDPEKPEAGFKYLYLTSDAKKRf 1704
                      69*******************************************************************************888877777777 PP

                      ................TEEEEEEEEE-ES.SSGHHSSHHHHHHHHHHHHHHHHHHHCS-EEEEESSEEETHHHHHHHHTSEEEEETTEEEEES CS
  Carboxyl_trans   93 ................gepligindsgGa.egriqegveslrgsGkifgenskasgeIpqislvtgrcaGggaYlpalgdrvimveetskifl 168 
                                      ge ++ i++++Ga +g   +gve+l+gsG i+g +s+a+++I++i+lvt+r++G+gaYl++lg+r+i++e+ ++i+l
      KHJ32356.1 1705 edgkskdviteevvedGEVRHRITTIVGAeDG---LGVECLKGSGLIAGITSRAYEDIFTITLVTCRSVGIGAYLVRLGQRAIQIEG-QPIIL 1793
                      88***************************666...****************************************************.***** PP

                      STHHHHHHHHSSCC-SSCHHHHSHHHHTTTTSSSEEESSHHHHHHHHHHHHTTS-SSTTSGGSS----ECSSGSSSH..HCS-CTTTS---HH CS
  Carboxyl_trans  169 tGpdvikkvlgreevtseelgGatqhmtksGvahltaeddeealelirkllsylPkkasnnresaPivetadepdrdlieivPdnakkpyDvr 261 
                      tG+++i+k+lgre++ts+ ++G+tq+m+k+Gv+h+ta+dd+e++++i+++++y+P+k++n   + Pi +++d++dr+ + ++P+ +k+p Dvr
      KHJ32356.1 1794 TGAPAINKLLGREVYTSNLQLGGTQIMYKNGVSHMTANDDFEGVSKIVEWMAYVPDKRNN---PLPIGPAVDTWDRE-VGYTPP-PKQPHDVR 1881
                      *******************************************************99999...*************7.9*****.9******* PP

                      HHHHCEEC..........TTC-EEESTTSSTTEEEEEEEETTEEEEEEEE--S....................EEETTEE-HHHHHHHHHHHH CS
  Carboxyl_trans  262 eviarlvd..........egeFlEikegyAktvVvGfArlgGipvGvvAnetr....................veaGqvlfidsavKaarfir 324 
                      ++i +++d          +++F E + g+AktvVvG+ArlgGip+Gv+A+etr                     eaG+v++++sa+K+a++i+
      KHJ32356.1 1882 WLIGGKEDeegflpglfdRDSFVEALGGWAKTVVVGRARLGGIPMGVIAVETRsvenitpadpanpdsteqitNEAGGVWYPNSAFKTAQAIK 1974
                      ********************************************************************************************* PP

                      HHHH.TT--EEEEE-BSEE--SHHHHHTTHHHHHHHHHHHHHT--S-EEEEE-T..EEEHHHHHTTTGGGSTTTTE..EETTT-EEESS-HHH CS
  Carboxyl_trans  325 lcda.enlPlviladvrGflvGqrqeyggilkhGaklvdalaeakvPkitvilr..kayGGayvvmdskingadlv..aawptariaVlgpeg 412 
                      ++++ e+lPl+ila++rGf++Gqr++y+++lk+G+ +vdal+++++P++++i++  +++GG++vv+d++in++ ++  +a+++ar++Vl+peg
      KHJ32356.1 1975 DFNNgEQLPLMILANWRGFSGGQRDMYNEVLKYGSFIVDALVKYEQPIFVYIPPfgELRGGSWVVVDPTINPE-YMemYADEDARGGVLEPEG 2066
                      ************************************************************************9.7779*************** PP

                      HHHHHSHHHHHHHHHHH.........HHHHHH.............HHHHHHHHHHHHHHHHHHHHHHHHHTTSSHHHHHHTTSSSEEEHGGGH CS
  Carboxyl_trans  413 aveilfrkekaaaemer.........kdlaae.............rkkklkeyeeellnpyvaaargfaDavidpsetraklvialelewkka 483 
                      +v+i++r++k+ ++m+r         k    +             +k k   +e+ ll++y++++++faD+++++++++ak+vi+++l w+++
      KHJ32356.1 2067 IVNIKYRRDKQLETMARldpeygslrK----QlldptlspdqlsdLKFKASTREQLLLPVYMQISLQFADLHDRAGRMKAKGVIRQSLVWRES 2155
                      *****************8888755441....3566667777778899********************************************** PP

                      H.HHHHHHHHH CS
  Carboxyl_trans  484 r.klparkrrn 493 
                      r ++++r rr+
      KHJ32356.1 2156 RrFFYWRVRRR 2166
                      ********997 PP

>> CPSase_L_D2  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.1   0.0   8.2e-55   1.3e-51      21     209 ..     229     413 ..     218     415 .. 0.96

  Alignments for each domain:
  == domain 1  score: 175.1 bits;  conditional E-value: 8.2e-55
                  CSSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSSEEEEEEEEEETTS-EEEEEEEEECCE CS
  CPSase_L_D2  21 aapvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkgpkeiEvevlrDakgnvitvcerenslq 118
                  ++ v++ +e la a+eig+Pv+ika+ g+GGkG r a++e+ +++l+++a +e +     + +++ k   + +++Ev++l+D++gn i ++ r++s+q
   KHJ32356.1 229 KGCVQSWQEGLAKAREIGFPVMIKASEGGGGKGIRKADSEDGFEALYNAAANEIP----GSPIFIMKLAGNARHLEVQLLADEYGNNISLFGRDCSVQ 322
                  5568999*********************************************996....789************************************ PP

                  CTCCCCEEEES-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEEEETTTTEEEEEEEESS--CCHHHHHHHHS--HHHHHHHHHTT--GC CS
  CPSase_L_D2 119 lrtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpkskeyyviEvNtRlsvesalaekaTGldlvkeaakialgekLe 209
                  +r+qk+ie+AP    +++++qa+++aav++ r vg+v+agtve+l+++ ++++y++E+N+Rl+ve++ +e++ G++l +++++ia+g +L+
   KHJ32356.1 323 RRHQKIIEEAPVTIAKPSTFQAMEKAAVRLGRLVGYVSAGTVEYLYSHADDKFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGLPLH 413
                  ****************************************************************************************997 PP

>> Biotin_carb_N  Biotin carboxylase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.5   0.1   8.2e-31   1.3e-27       2     110 .]      60     181 ..      59     181 .. 0.94

  Alignments for each domain:
  == domain 1  score: 96.5 bits;  conditional E-value: 8.2e-31
                    --EEEE---HHHHHHHHHHHHHT.........T-EEEEEEEGG..GTTSHHHHHSSEEEEEESSTTCCGGG-HHHHHHHHHHTT-SEEE--SSTTT CS
  Biotin_carb_N   2 ikkvlianrGeiAvriiravrel.........gietvavysee..danslhvreadeavelgpasasesYlniekivkaakesgadavhpGyGfls 86 
                    i++vlian+G +Av+ ir+vr++         +i++++++++e  +an+ ++r+ad++ve+++++++++Y+n+e iv++a++ +++av+ G+G++s
     KHJ32356.1  60 ITNVLIANNGIAAVKEIRSVRKWayetfgderAIQFTVMATPEdlQANADYIRMADQYVEVPGGTNNNNYANVELIVDVAERMDVHAVWAGWGHAS 155
                    689*****************************9*********94446777********************************************** PP

                    T-HHHHHHHHH..TT-EESSS-HHHH CS
  Biotin_carb_N  87 Enaefaeavee..agivfiGPsaeal 110
                    En++++e++++  ++ivfiGP+ +a+
     KHJ32356.1 156 ENPKLPESLAAspKKIVFIGPPGSAM 181
                    ********996569********9987 PP

>> Biotin_carb_C  Biotin carboxylase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.5   0.0   1.4e-22   2.2e-19       2     108 .]     457     564 ..     456     564 .. 0.99
   2 !    6.5   0.0    0.0054       8.9       8      51 ..     699     741 ..     692     743 .. 0.79

  Alignments for each domain:
  == domain 1  score: 69.5 bits;  conditional E-value: 1.4e-22
                    EEEESEETTTTTEE--CE-SEEE---STTEEEEE---TT-EE-TTS-SEEEEEEEEESSHHHHHHHHHHHHHT-EEES.S-BSHHHHHHHHH-HHH CS
  Biotin_carb_C   2 aRinaEdpeknflpssGkvtelelpegpgvRvdsgveegsevspyyDsllaKlivhgetreealarlrraLaelrieG.vktnieflrailedeef 96 
                    +Ri++Edp ++f pssG ++el++ ++ +v+ + +v +   ++++ Ds +++++++ge+r++  + +  aL+el i+G ++t++e+l ++le+++f
     KHJ32356.1 457 CRITSEDPGEGFKPSSGMMHELNFRSSSNVWGYFSVGTAGGIHSFSDSQFGHIFAYGENRSASRKHMVVALKELSIRGdFRTTVEYLIKLLETPAF 552
                    9*********************************************************************************************** PP

                    HHT---TTTCCC CS
  Biotin_carb_C  97 akgeldtkflee 108
                    ++++++t++l+e
     KHJ32356.1 553 EENTITTGWLDE 564
                    **********85 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0054
                    ETTTTTEE--CE-SEEE---STTEEEEE---TT-EE-TTS-SEE CS
  Biotin_carb_C   8 dpeknflpssGkvtelelpegpgvRvdsgveegsevspyyDsll 51 
                    dp++   ps+Gk+ ++++ +g++vR  + ++ + ev + y +ll
     KHJ32356.1 699 DPSQLRTPSPGKLVKYTVENGEHVRAGQPFA-EVEVMKMYMPLL 741
                    8888899******************988876.456666666665 PP

>> Biotin_lipoyl  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.8   0.0     1e-19   1.6e-16       2      72 ..     702     766 ..     701     767 .. 0.97
   2 ?   -0.2   0.0      0.55     9e+02       2      36 ..    1236    1269 ..    1235    1271 .. 0.77

  Alignments for each domain:
  == domain 1  score: 59.8 bits;  conditional E-value: 1e-19
                    EEEESSSEEEEEE.ECSESSSTTCEE-TTSEEEEEECTTEEEEEEBSSSEEEEEESSTTTEEE-TTCEEEE CS
  Biotin_lipoyl   2 eiksPmiGesveegvvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdtvevgdllak 72 
                    ++++P++G++v+     ++v++G++V agq+ aeve+mKm m++ a ++G+v+ i+++ G+t+e+gd+l +
     KHJ32356.1 702 QLRTPSPGKLVK-----YTVENGEHVRAGQPFAEVEVMKMYMPLLAAEDGIVQLIKQP-GATLEAGDILGI 766
                    799*********.....*****************************************.*********976 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.55
                     EEEESSSEEEEEE.ECSESSSTTCEE-TTSEEEEE CS
  Biotin_lipoyl    2 eiksPmiGesveegvvevlvkvGdkVkagqvlaev 36  
                     +i sP + e  + +vv++ v + ++++ +++la +
     KHJ32356.1 1236 TIPSPNLDEELT-AVVNIAVRDAESIEDNETLARI 1269
                     567777777777.4999999999999999999877 PP

>> ATP-grasp_3  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.2e-05      0.02      27     159 ..     242     385 ..     236     387 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.2e-05
                  SS--SSSEEEEESS-------B--SS--TTE................EEEE---SEEEEEEEEE.SSSEEEEEEEEEEEET....TEEEEEEES---- CS
  ATP-grasp_3  27 leeeekklvvKprdGaggesvrvveekeeaeaaieeve.........lvqefieGkplSvsllsdgekvlvlavnrqliekaekefvyaGnvtpiete 115
                  ++e   ++ +K ++G+gg+++r+++ ++  ea  +  +         +++   + ++l v+ll+d+  + +  + r    +++++ +   + +p+   
   KHJ32356.1 242 AREIGFPVMIKASEGGGGKGIRKADSEDGFEALYNAAAneipgspifIMKLAGNARHLEVQLLADEYGNNISLFGRDCSVQRRHQKII--EEAPVTI- 336
                  566677899******************9999888766567777776666666666778888888777777766666665443443333..4455543. PP

                  HHHHHHHHHHHHHTTSTT--EEEEEEEE.....ESS.SEEEEEEESS-- CS
  ATP-grasp_3 116 lkeevvelaeevvekleglaGyvGvDlv.....lkdeepyviEvNPRlt 159
                   k ++++++e++  +l  l+Gyv    v      +d++ y++E NPRl+
   KHJ32356.1 337 AKPSTFQAMEKAAVRLGRLVGYVSAGTVeylysHADDKFYFLELNPRLQ 385
                  3667777888888888899999877777666766679**********97 PP

>> Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   1.5e-05     0.025       6     100 ..     218     314 ..     214     383 .. 0.67

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.5e-05
                      T--B--EEEEETTHHCH-H-HHHHHHHHHC-SSEEEEESSSSTTTTEEEESSGGGHHHHHHHHHTT..-SCEEEEE--.ESEEEEEEEEETSS. CS
  Dala_Dala_lig_C   6 GlpvvpyvvlekeeakeekkellekveeelgypvfVKpareGSSvGvskveseeelkeaieeafky..dekvlvEeai.egreievavlgnek. 95 
                      G+ +v+ +v  k   ++++ e l+    e+g+pv++K+++ G   G+ k+ se+ +++  ++a++    + +++ +   ++r +ev +l +e  
       KHJ32356.1 218 GIVTVDEAVYMKGCVQSWQ-EGLA-KAREIGFPVMIKASEGGGGKGIRKADSEDGFEALYNAAANEipGSPIFIMKLAgNARHLEVQLLADEYg 309
                      5555555555555555555.3333.34689***************************99999887633578999999999*******9997763 PP

                      CEEEE CS
  Dala_Dala_lig_C  96 levse 100
                      +++s 
       KHJ32356.1 310 NNISL 314
                      44444 PP

>> GxGYxYP_N  GxGYxY sequence motif in domain of unknown function N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.5e-05     0.041      95     191 ..      64     159 ..      55     172 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.5e-05
                 HHHHTT---EEEE-TT..--HHHHHHHHGGGS-SSEEEE--TT--SSSHHHHHHHT-EEE----TT....---HHHHHHHHTS-TT-EEEE-TTS.HHH CS
   GxGYxYP_N  95 lakelglkkelqDlrgkfeayawaldeyadklnkklivllspdkkaelrDYaiasklfvfwldskke...eetsllkkilskmpkgaivlGWgpdsEga 190
                 l+++ g+   ++ +r      +wa++++ d+   +++v ++p+  ++ +DY+ ++   v    + ++   ++ +l+ ++ ++m+  a+  GWg +sE+ 
  KHJ32356.1  64 LIANNGIA-AVKEIRS---VRKWAYETFGDERAIQFTVMATPEDLQANADYIRMADQYVEVPGGTNNnnyANVELIVDVAERMDVHAVWAGWGHASENP 158
                 56778888.8899998...99*********9999999999988788999***8887776554444445799***********************99876 PP

                 H CS
   GxGYxYP_N 191 g 191
                 +
  KHJ32356.1 159 K 159
                 5 PP

>> Biotin_lipoyl_2  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00017      0.27       4      33 ..     702     731 ..     697     735 .. 0.88
   2 ?   -4.0   0.0       8.8   1.4e+04      25      33 ..     759     767 ..     754     772 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00017
  Biotin_lipoyl_2   4 sIaapvsGrVaqlnVkdGqrVkaGdvLael 33 
                      ++  p +G++++  V+ G +V aG+  ae 
       KHJ32356.1 702 QLRTPSPGKLVKYTVENGEHVRAGQPFAEV 731
                      677899*******************98876 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 8.8
  Biotin_lipoyl_2  25 kaGdvLael 33 
                      +aGd+L +l
       KHJ32356.1 759 EAGDILGIL 767
                      79***9776 PP

>> ATPgrasp_Ter  ATP-grasp in the biosynthetic pathway with Ter operon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00016      0.26      73     117 ..     371     416 ..     320     425 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00016
  ATPgrasp_Ter  73 dedgpkLLEiNpRasGGlgys.alaGvnlpylalklllgleteeve 117
                    +d+ + LE NpR +     + +++Gvnlp + l+ ++gl+ + ++
    KHJ32356.1 371 ADDKFYFLELNPRLQVEHPTTeMVSGVNLPAAQLQIAMGLPLHRIR 416
                   45679**********9988773678*************98665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 1.07u 0.31s 00:00:01.38 Elapsed: 00:00:00.47
# Mc/sec: 14399.76
//
Query:       KHJ32357.1  [L=492]
Description: putative acetyl-hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-37  128.0   0.0    6.6e-37  127.4   0.0    1.3  1  Abhydrolase_3  alpha/beta hydrolase fold
     0.0078   15.1   0.0      0.031   13.1   0.0    1.8  2  Say1_Mug180    Steryl acetyl hydrolase


Domain annotation for each model (and alignments):
>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.4   0.0   7.4e-41   6.6e-37       1     209 [.     176     407 ..     176     409 .. 0.87

  Alignments for each domain:
  == domain 1  score: 127.4 bits;  conditional E-value: 7.4e-41
                    EEEE--STTTS--TTTTHHHHHHHHHHHTSEEEEEE---TTTS-TTHHHHHHHHHHHHHHHTHH.HHT..ETTCEEEEEEETHHHHHHHHHHHHHH CS
  Abhydrolase_3   1 lvyfHGGGfvlgsldthdalcrelakelgavvvsvdYrlAPehpfPaavedalaalrwlaeqaw.elg..adpsrivlaGdSaGGnlaaavalrar 93 
                    ++y+HGG+  l +++ ++++ ++lak++g +++sv+YrlAP++pfPa++ d++ a+  l+     +++  +  s+iv+aGdSaGGnl++a+++ + 
     KHJ32357.1 176 IMYIHGGAHFLLDPAFYRTMTQKLAKNTGGRCFSVRYRLAPQNPFPAPLLDVFLAYVSLLYPPPgSFHapVPSSEIVFAGDSAGGNLSYALLQLIL 271
                    68************************************************************988888557799******************9999 PP

                    HTT---..............EEEEEEESE-SST.....SSTTSHHHH....HCHHTTTSSSSCHHHHHHHHHHHSSGGGGGSTTTSGGGCS-SST- CS
  Abhydrolase_3  94 degepk..............vagqvliyPvtdl.....ertesesik....kaeeladgplltraaldlfwrlylpeadrddplaspllaedlsgl 166
                    + ++++              + g++ ++P++d      ++ ++ +++    ++ ++++  +++ +  + f  +y+++  +++pl+sp+  +d++g 
     KHJ32357.1 272 ELQRSSlkiiwygeervvpvPGGMACLSPWLDItlsmpSNVTNRQFDflpkRELQFKSSGVWPSNPPRKF--MYANDTLVSHPLVSPVTVTDWRGS 365
                    88755578*********************88876665633333332211102333466667778888864..7889999*********999***** PP

                    --EEEEEETT-TTHHHHHHHHHHHHHTT--EEEEEETTEETTG CS
  Abhydrolase_3 167 pptlvvvaefDplrdegeayaerlraagvevelieyegmvHgf 209
                    +p++v+v+++ +l de++ +  +++ +gv   ++eye m+H+f
     KHJ32357.1 366 CPIYVAVGWE-LLADENKFTIMQMANQGVTIVYEEYEAMPHCF 407
                    *******998.*******************************9 PP

>> Say1_Mug180  Steryl acetyl hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0     0.074   6.6e+02     120     135 ..     171     186 ..     148     201 .. 0.73
   2 !   13.1   0.0   3.5e-06     0.031     196     242 ..     250     309 ..     243     336 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.074
  Say1_Mug180 120 kvDpvllylHGGgfal 135
                  ++   ++y+HGG   l
   KHJ32357.1 171 TSTATIMYIHGGAHFL 186
                  5567899****98755 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 3.5e-06
  Say1_Mug180 196 nvvvlGdSaGGnl...vLslllklskln.kvvl.........PkkaiaiSPWlnltilde 242
                  ++v  GdSaGGnl   +L+l+l+l++   k ++         P + + +SPWl++t    
   KHJ32357.1 250 EIVFAGDSAGGNLsyaLLQLILELQRSSlKIIWygeervvpvPGGMACLSPWLDITLSMP 309
                  79999*******7444788999977654233323333333338899999*****996554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (492 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 3314.00
//
Query:       KHJ32358.1  [L=702]
Description: putative heat shock protein 90 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.3e-220  733.7  32.0   1.7e-220  733.3  32.0    1.1  1  HSP90        Hsp90 protein
    7.4e-15   55.4   0.1    1.4e-14   54.5   0.1    1.5  1  HATPase_c    Histidine kinase-, DNA gyrase B-, and HSP90-like
    1.5e-10   41.1   0.1    1.5e-10   41.1   0.1    2.0  2  HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like
     0.0065   16.5   0.4      0.027   14.5   0.4    2.0  1  LOH1CR12     Tumour suppressor protein
  ------ inclusion threshold ------
       0.71    9.9   3.8        3.1    7.8   0.3    2.6  2  DUF1676      Protein of unknown function (DUF1676)


Domain annotation for each model (and alignments):
>> HSP90  Hsp90 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  733.3  32.0  4.7e-224  1.7e-220       1     505 [.     183     685 ..     183     700 .. 0.93

  Alignments for each domain:
  == domain 1  score: 733.3 bits;  conditional E-value: 4.7e-224
                 GGGSHHHHHHHHHHCCTTSSS-EEEEEEEEXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXX..XXXXXXXXXXEEEEEEESXXSXGGGSXGGGSXHH CS
       HSP90   1 eyleekklkelvkkySeFinfpiyllkekeeekeveeeeeeeeeeeee.eeeeakveeeeeeeeekkktkkvketvkewellNkqkpiWlrkpkevtee 98 
                 +yl+e k+ke++kk+SeFi++piyl+++ke+e+ev++e+ee  ++ee+ + + ++v++eeee+e+kkktkkvke++ e+e+lNkqkpiW+r+p+++t e
  KHJ32358.1 183 DYLNEAKIKEVIKKHSEFISYPIYLHVTKETETEVPDEDEEVVKDEESkNAKIEEVDDEEEEKEKKKKTKKVKEVKVEEEELNKQKPIWTRNPSDITAE 281
                 7***********************************9888877665431344444445555555599******************************** PP

                 HHHHHHHHTTTTTSXXSEEEEEEEXSSSXEEEEEEEXSSXXTTTTTTTTTSXXTTEEEEETTEEEESXXTTSSXGGGTTXEEEEEESSSXSSSTHHHHH CS
       HSP90  99 eYkeFYkslskdsedplavkhfsaegevefkaiLfvPkrapsdlfekykkkkknnikLYvrrVfitdefedllPkyLsFvkGvvdsddLPLNvsREtlq 197
                 eY +FYksls+d+ed+lavkhfs+eg++ef+aiLfvPkrap+dlfe+  kk+knnikLYvrrVfitd+++dl+P++LsFvkGvvds+dLPLN+sREtlq
  KHJ32358.1 282 EYGAFYKSLSNDWEDHLAVKHFSVEGQLEFRAILFVPKRAPFDLFET--KKTKNNIKLYVRRVFITDDATDLIPEWLSFVKGVVDSEDLPLNLSRETLQ 378
                 **********************************************8..799*********************************************** PP

                 TCHHHHHHHHHHHHHHHHHHHTSXHHH..HHTHHHHHHHHHHHHHHHXGGGHHHHHTTXEEEETTEEEEEEEHHHHHHHSXTTXXEEEEEEXSSHHHHH CS
       HSP90 198 qnkilkvikkklvrKvlemlkklaeekeeykkfykefsknlklGiiedsanrkklakLlrfksskseeeltsLedYvermkekqksiYyiageskeeve 296
                 qnki+kvikk++v+Kvle+++++ae+ke+++kfy++fskn+klGi+ed++nr+ lakLlrf+s+ks++++tsL+dY++rm e+qk++Yyi+ges+++v+
  KHJ32358.1 379 QNKIMKVIKKNIVKKVLELFQEIAEDKEQFDKFYSAFSKNIKLGIHEDAQNRAALAKLLRFNSTKSGDDQTSLTDYITRMPEHQKNLYYITGESIKAVS 477
                 *************************************************************************************************** PP

                 TSGGGHHHHHTTXXEEEEXSTTHHHHHHTXSEETTEEEEETTBSTXXXXXXHHHHHHHHHHHHHHHHHHHHHHHTTTTTESEEEEXSSXSSXSEEEEBX CS
       HSP90 297 kspflerlkkkgyevlylvdpiDeyvvqqlkeyegkklvnvakegleleeeeeekkkkeelkkkfeeltkllkevlkdkvekvkvserlvdsPcvlvts 395
                 kspfl++lk+k++evl+lvdpiDey+++qlke++gkklv+++k+ +e+ee+eeekk++e+++k+fe+l+k+lk+vl+dkvekv+vs++l  sPc++ t+
  KHJ32358.1 478 KSPFLDALKEKNFEVLFLVDPIDEYAMTQLKEFDGKKLVDITKD-FEFEETEEEKKAREAEEKEFESLAKALKNVLGDKVEKVVVSHKLIGSPCAIRTG 575
                 *******************************************7.9***************************************************** PP

                 TTSXXHHHHHHHHHHHHHHHSSTSSSSSXEEEEEXTTSHHHHHHHHHHHHTTT.XHHHHHHHHHHHHHHHHHTTXXXSXHHHHHHHHHHHHTTTTHXXS CS
       HSP90 396 eygwsanmerimkaqalrdkskssymsskktleinprhpiikeLkkkveedke.deeakdlaellyetallesGfsledpasfakrierllklslgide 493
                 ++gwsanmerimkaqalrd+s+ssymsskkt+ei pr piikeLkkkve+d e d+++k++++ll+et+ll sGf++e+pa fa+ri++l++l+l++de
  KHJ32358.1 576 QFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPRSPIIKELKKKVEADGEsDRTVKSITQLLFETSLLVSGFTIEEPAGFAERIHKLVSLGLNVDE 674
                 *************************************************986549******************************************55 PP

                 TTTTTTGGGXGG CS
       HSP90 494 deeveeeeevee 505
                 ++e+e   +v+e
  KHJ32358.1 675 ETEAEPI-AVDE 685
                 5544432.2222 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.1   3.9e-18   1.4e-14       1     111 [.      26     180 ..      26     181 .. 0.81

  Alignments for each domain:
  == domain 1  score: 54.5 bits;  conditional E-value: 3.9e-18
                 EHHHHHHHHHHHHHHHHHHH..........HSTTTEEEEEEEEEETEEEEEEEESSSSSTTHHHT.......GTCS.TTCH.....HCSTCHTSTSSSH CS
   HATPase_c   1 gdekrLrqiisnlvdNavkf..........atkageieveikaseddlvisveDnGiGipkedlk.......klfe.kfsq.....ddstkrggggtGl 76 
                 ++e++Lr+++sn +d+++k+            +++++++ i +++++ +++++D+GiG++k+dl        ++++  f++     +d +++g++g+G+
  KHJ32358.1  26 NKEIFLRELVSNCSDALDKIryealsdanrLESGKDLRIDIIPNKENRTLTIKDTGIGMTKADLVnnlgtiaRSGTkQFMEaltagADISMIGQFGVGF 124
                 5899****************99988876432367799999998778**************************999999999998566666666666665 PP

                 .HHHHH.............HH.HHH.HTTTEEEE....EEET.TTEEEEEEEEESS CS
   HATPase_c  77 .Glsiv.............kk.lve.lmgGeiwv....esep.grGttftftlple 111
                  ++++v             ++ ++e   gG++++    + ep grGt+++++l++e
  KHJ32358.1 125 ySAYLVadqvtvvskhnddDQyVWEsSAGGTFTLtpdtTGEPlGRGTKIILHLKEE 180
                 5555558988888888888666888889999999665433449**********997 PP

>> HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.1     4e-14   1.5e-10       1      99 [.      24     145 ..      24     152 .. 0.82
   2 ?   -4.0   0.9       3.3   1.2e+04     114     119 ..     244     249 ..     223     267 .. 0.45

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 4e-14
  HATPase_c_3   1 ysl.ekAlaelvdNsldAdaen..................vkievnknrgktgeivieDdGkGmseeelknal.rlatsskeakr.......kstslG 71 
                  ys+ e+ l elv N+ dA  +                   ++i  nk+   + +++i+D G Gm++++l n l ++a+s +++         +   +G
   KHJ32358.1  24 YSNkEIFLRELVSNCSDALDKIryealsdanrlesgkdlrIDIIPNKE---NRTLTIKDTGIGMTKADLVNNLgTIARSGTKQFMealtagaDISMIG 118
                  566688899********987778899999999******7777777775...58******************7747999988855434444335666** PP

  HATPase_c_3  72 kkGiGlklAslslgkkltvitkkegess 99 
                  ++G+G + ++  +++++tv++k++++ +
   KHJ32358.1 119 QFGVG-FYSAYLVADQVTVVSKHNDDDQ 145
                  *****.999999**********998755 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 3.3
  HATPase_c_3 114 kvleel 119
                  ++ ++ 
   KHJ32358.1 244 EKEKKK 249
                  222222 PP

>> LOH1CR12  Tumour suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.4   7.6e-06     0.027      48      88 ..     376     417 ..     366     428 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 7.6e-06
    LOH1CR12  48 Aadqaklverik.evdakiitllaelrekqkqyasyaealsk 88 
                   +q+k+++ ik ++ +k+ +l++e+ e ++q++++  a+sk
  KHJ32358.1 376 TLQQNKIMKVIKkNIVKKVLELFQEIAEDKEQFDKFYSAFSK 417
                 568******9973699************************98 PP

>> DUF1676  Protein of unknown function (DUF1676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.3     0.045   1.6e+02      36     122 ..     224     252 ..     128     260 .. 0.62
   2 ?    7.8   0.3   0.00088       3.1      26      83 ..     514     565 ..     499     568 .. 0.58

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.045
     DUF1676  36 lvrneeaasasskeeeeelsreeeeareeelekllleklerflkshslevklpeeldaegaeesisrsleedne.................egRkkkkk 117
                 +                                                                                          e   kk  
  KHJ32358.1 224 V------------------------------------------------------------------------VkdeesknakieevddeeEEKEKK-- 248
                 2........................................................................122222222222223333333222.. PP

     DUF1676 118 kkklk 122
                  kk k
  KHJ32358.1 249 -KKTK 252
                 .2222 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00088
     DUF1676  26 deielvdgvslvrneeaasasskeeeeelsreeeeare...eelekllleklerflkshsl 83 
                 + ++++ + ++  +ee++      +++e++++e    e   ++l++ l +k+e+++ sh+l
  KHJ32358.1 514 KLVDITKDFEFEETEEEK------KAREAEEKEF---EslaKALKNVLGDKVEKVVVSHKL 565
                 334444444444433332......2222222333...24559*****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (702 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2329  (0.129901); expected 358.6 (0.02)
Passed bias filter:                      590  (0.0329076); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.77u 0.29s 00:00:01.06 Elapsed: 00:00:00.45
# Mc/sec: 4654.43
//
Query:       KHJ32359.1  [L=220]
Description: putative 50s ribosomal protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.6e-07   30.3   0.0    1.1e-06   28.7   0.0    1.9  2  Ribosomal_L31  Ribosomal protein L31
  ------ inclusion threshold ------
       0.14   12.6   0.0       0.24   11.9   0.0    1.3  1  Oest_recep     Oestrogen receptor


Domain annotation for each model (and alignments):
>> Ribosomal_L31  Ribosomal protein L31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   1.2e-10   1.1e-06      13      67 .]      53     111 ..      41     111 .. 0.78
   2 ?   -2.7   0.0      0.83   7.4e+03       3      20 ..     121     138 ..     119     145 .. 0.59

  Alignments for each domain:
  == domain 1  score: 28.7 bits;  conditional E-value: 1.2e-10
  Ribosomal_L31  13 vvkcacgeefltrStlkekpeikvdvcsksHPfYtGkq.....klvdtaGrvekFkkryg 67 
                     ++ ++g++f++r+t +  p++k   +s++HP+++ ++       +d+aGr   F+kr+g
     KHJ32359.1  53 LIVLSDGSTFTMRTT-SPAPVYKSAKDSRNHPLWQPSSaalrnVETDEAGRLRAFRKRFG 111
                    455679*********.9******************5543563334567***********7 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.83
  Ribosomal_L31   3 kgiHPeyrevvvkcacge 20 
                    ++ + + ++++++ ++g+
     KHJ32359.1 121 QETKKNSNDIKIRTRSGN 138
                    555555566666666555 PP

>> Oest_recep  Oestrogen receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.7e-05      0.24      91     116 ..      57      82 ..      44      97 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.7e-05
  Oest_recep  91 neqssyalreaaptafYrsssdsrrq 116
                 ++ s++++r ++p+++Y+s+ dsr +
  KHJ32359.1  57 SDGSTFTMRTTSPAPVYKSAKDSRNH 82 
                 7899*******************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      282  (0.0157287); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1571.58
//
Query:       KHJ32360.1  [L=585]
Description: putative sorting nexin 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-85  286.7   0.6    2.5e-85  285.8   0.6    1.4  1  Vps5            Vps5 C terminal like
      3e-27   94.9   1.2    5.6e-27   94.0   0.1    2.1  2  PX              PX domain
     0.0067   16.4   0.3      0.042   13.8   0.0    2.2  3  Lipase_GDSL     GDSL-like Lipase/Acylhydrolase
  ------ inclusion threshold ------
       0.02   14.0   0.6      0.041   13.0   0.6    1.5  1  BAR_2           Bin/amphiphysin/Rvs domain for vesicular traf
      0.027   13.9   1.2       0.31   10.5   1.2    2.1  1  BAR_3_WASP_bdg  WASP-binding domain of Sorting nexin protein
       0.15   11.7   5.6        2.6    7.7   1.8    2.5  2  BAR_3           BAR domain of APPL family


Domain annotation for each model (and alignments):
>> Vps5  Vps5 C terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  285.8   0.6   8.2e-89   2.5e-85       3     235 ..     301     532 ..     299     533 .. 0.98

  Alignments for each domain:
  == domain 1  score: 285.8 bits;  conditional E-value: 8.2e-89
        Vps5   3 slfkkltssisksstkfeEqDewFedkkqeldslesqLkkLykaiellvsqrkelasataelakslesLaslelskslsralsqlaeveerikellerq 101
                 ++f++++ ++     kf EqD+wF+d++ +ld+le+qLk L ka++ ++++rk la+a+++++ sl +L+++e+s+sl+  l  l++++ rikel++rq
  KHJ32360.1 301 GMFGGFGIAVGG-GGKFVEQDDWFHDRRIYLDALENQLKALFKAMDVVINHRKGLAEAAGDFSMSLYALSTVEISPSLAGPLGGLSDLQIRIKELYDRQ 398
                 577777887777.89************************************************************************************ PP

        Vps5 102 aeqdvltLgetideylrligsvksvfeqRvklwqkwqsaeqelskkkeqleKlekaaksqqdklqqlkkeveelerkvqeaekeFeeisetikkElerF 200
                 a+qdvltL +tidey+rligs+k++f+qR+k++ +w+ aeqe++kkk+ +eKl +++ksqqd+l q+++ v ++e+kv++a+  Fe++++ +++El+rF
  KHJ32360.1 399 AQQDVLTLVITIDEYIRLIGSIKQAFAQRQKAFASWHLAEQEMHKKKALQEKLMRQGKSQQDRLVQINAGVSDAEKKVHQARLLFEDMGRLMRSELDRF 497
                 *************************************************************************************************** PP

        Vps5 201 etervedfknvvekyLesaiesqkevielWetfls 235
                 e+e+vedfk+++e++Le aie+qke+ie+Wetfl 
  KHJ32360.1 498 EREKVEDFKSAIETFLEGAIEAQKELIEIWETFLM 532
                 *********************************97 PP

>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       1.5   4.3e+03      60      79 ..      96     115 ..      91     121 .. 0.61
   2 !   94.0   0.1   1.9e-30   5.6e-27       2     112 ..     168     280 ..     167     281 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.5
                 STSSSTSGSSSSSCTTSHHH CS
          PX  60 iPplPkkvlfgsvrkkdeef 79 
                  Pp+P+k+  +s+ +++ ++
  KHJ32360.1  96 QPPAPPKKEESSNVNHQAQQ 115
                 59999999777633333333 PP

  == domain 2  score: 94.0 bits;  conditional E-value: 1.9e-30
                 SEEEEEEEEEEEETTSSEEEEEEEEEETTS.....SSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHH CS
          PX   2 dlaqvsvleretsgskkhsyylyevelktg.....akewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrll 95 
                 +++++sv ++++ g+  +s ++y+v++kt      ++e++v RrY+dF +Lh+ L  + p++++Pp P+k+ +g+   ++++f+e+rr++Le++L++++
  KHJ32360.1 168 PSFEISVGDPHKVGDLTSSHTVYQVRTKTTskayhKSEFEVTRRYRDFLWLHNSLHANNPGIVVPPPPEKQAVGR---FEQNFVESRRAALERMLNKIA 263
                 567899*****99***************999*******************************************9...********************* PP

                 TSCHHHHSHHHHHHHHS CS
          PX  96 nhpelrnsevlteFLev 112
                  hp l+ + +l+ FLe+
  KHJ32360.1 264 AHPALQHDADLKIFLES 280
                 ***************97 PP

>> Lipase_GDSL  GDSL-like Lipase/Acylhydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   1.4e-05     0.042      88     159 ..     197     260 ..     191     288 .. 0.75
   2 ?   -1.4   0.0      0.63   1.9e+03      51      83 ..     444     483 ..     409     525 .. 0.60
   3 ?   -1.8   0.0      0.87   2.6e+03     141     189 ..     496     566 ..     482     567 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.4e-05
                  SCTTTCEEHHHHHHHHHHHHHHHH.HHHHTTEEEEEEE-SSTCHCTCCCCHCCHHHHHHHHHHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Lipase_GDSL  88 stdaakkeaeeyiknlreaikelk.eegapkaivvlvsppglgpqeekdakklgekgnefvgeynqrlndlae 159
                  +  a++k++ e+++++r+++  l+ + +a+++ +v+ +pp++          +g++  +fv++    l+ +++
   KHJ32360.1 197 TSKAYHKSEFEVTRRYRDFLW-LHnSLHANNPGIVVPPPPEKQA--------VGRFEQNFVESRRAALERMLN 260
                  5568899999***********.66599***************99........555555555555555555544 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.63
                  HHCCHECTTTECHHHHHCTTSEEEEE--CTCC..........- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........x RF
  Lipase_GDSL  51 lqqllnkyplkseqlkalhpdlviislGtNDs..........n 83 
                  ++ l+  + l++ q k+ +  lv i+ G  D           +
   KHJ32360.1 444 KKALQ--EKLMR-QGKSQQDRLVQINAGVSDAekkvhqarllF 483
                  33333..33333.344444448888888888854444444440 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.87
                  HHHHHHHHHHHHHHHHHHH...HCTEEEECHHHHHHHTHCCGCHCH...................TSSSB- CS
                  xxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxx...................xxxxxx RF
  Lipase_GDSL 141 ekgnefvgeynqrlndlae...kdgfavvDlydelqglsgieqlka...................DglHps 189
                  ++ +e v+ + + ++  +e   +++ +++++++++    ++e+ +                    Dg H s
   KHJ32360.1 496 RFEREKVEDFKSAIETFLEgaiEAQKELIEIWETFLMQLDAEEDEGafykppveraaqpipqptgDGSHNS 566
                  55567788888888888888888999999999999888555544435666666666666666666776766 PP

>> BAR_2  Bin/amphiphysin/Rvs domain for vesicular trafficking
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.6   1.4e-05     0.041     144     233 ..     421     511 ..     353     541 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.4e-05
       BAR_2 144 dedlepLikvleqvssaykeiaeakleqDslivkefnkkLeellnqefkkvhelrkkVeesRlkfd....tlrseveekekpeteeedkkllek 233
                 +++ ++  k++ ++  a++e+ + k+ q +l+ ++  +  ++ l q  + v++  kkV+++Rl f+    ++rse+++  + e+ e++k+++e+
  KHJ32360.1 421 KQAFAQRQKAFASWHLAEQEMHKKKALQEKLMRQGKSQ--QDRLVQINAGVSDAEKKVHQARLLFEdmgrLMRSELDR-FEREKVEDFKSAIET 511
                 555566679***********************998665..4777788899***************8444457888877.566666645544443 PP

>> BAR_3_WASP_bdg  WASP-binding domain of Sorting nexin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.2    0.0001      0.31     172     219 ..     469     518 ..     362     533 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.0001
  BAR_3_WASP_bdg 172 lsseekeklkkrv..svisyallaeinhfhserieDfksvmqlyLkqqvk 219
                     +s++ek+  + r+  + ++  + +e++ f +e++eDfks ++++L+  ++
      KHJ32360.1 469 VSDAEKKVHQARLlfEDMGRLMRSELDRFEREKVEDFKSAIETFLEGAIE 518
                     34444444444432267889999**********************98876 PP

>> BAR_3  BAR domain of APPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   1.8   0.00086       2.6      24      86 ..     330     394 ..     326     481 .. 0.56
   2 ?    2.4   4.4     0.037   1.1e+02      47     125 ..     423     514 ..     393     529 .. 0.67

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00086
       BAR_3  24 leelekklkkllKlckrlieagkaysaaqkqfaqsLrelkkeskgdeetd..esLkkfsellqel 86 
                 l+ le++lk l K++  +i+  k + +a   f+ sL  l+   ++ ++      L  ++  ++el
  KHJ32360.1 330 LDALENQLKALFKAMDVVINHRKGLAEAAGDFSMSLYALSTVEISPSLAGplGGLSDLQIRIKEL 394
                 689*********************************99998887766555443333333333333 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.037
       BAR_3  47 aysaaqkqfaq.sLrelkkes...kgdeetd......esLkkfsellqelen...ehtilldqaqrsikkpLekFrkedlkevkekkkkFdk 125
                 a+ + qk+fa+ +L e ++++    +++++       + L +++  ++  e+   + + l++ + r ++ +L++F +e+++ +k + + F  
  KHJ32360.1 423 AFAQRQKAFASwHLAEQEMHKkkaLQEKLMRqgksqqDRLVQINAGVSDAEKkvhQARLLFEDMGRLMRSELDRFEREKVEDFKSAIETFLE 514
                 4444555554434444444443333333333666666777777777766655111456799***********************99999965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       924  (0.0515366); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 4071.69
//
Query:       KHJ32361.1  [L=180]
Description: putative mediator complex protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-31  109.2   3.2    2.5e-31  109.0   3.2    1.1  1  Med11       Mediator complex protein
  ------ inclusion threshold ------
      0.037   13.1   0.2      0.041   13.0   0.2    1.2  1  Effector_1  Effector from type III secretion system
      0.053   13.4   0.1      0.095   12.6   0.1    1.4  1  LemA        LemA family


Domain annotation for each model (and alignments):
>> Med11  Mediator complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.0   3.2   4.1e-35   2.5e-31       2     137 .]      21     163 ..      20     163 .. 0.91

  Alignments for each domain:
  == domain 1  score: 109.0 bits;  conditional E-value: 4.1e-35
       Med11   2 eriqqLneIDkdIvslLesasealkaLskppeqepaseseeaqkeafkaatstffstLssvdvrLrrqIyaLeeagiitlessaaasagksaa...... 94 
                 eriqqLn+IDk++  lL+sa+ a+++Ls+   q p+++ + +++++f+++++++++tL+++dv L rqI++Leea+ii +++s++++ ++++       
  KHJ32361.1  21 ERIQQLNDIDKSLNRLLRSAGLAMQTLST--IQAPDNRLTSHRRQQFEENCNSYLQTLQTIDVALFRQIHGLEEANIIPADKSKKEKITDNQPrvrpti 117
                 9****************************..9999999999***************************************999988877777789**** PP

       Med11  95 karlepsgv....gavgnldvgwlnsrsskverdmeaelwaearelL 137
                 ++ + +++     ++++  dvg ln +s++++++ eaelw+ear lL
  KHJ32361.1 118 NRAFADKDLvkttESLKTYDVGLLNCQSERMDKE-EAELWKEARMLL 163
                 5555555544555899****************99.********9876 PP

>> Effector_1  Effector from type III secretion system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2   6.9e-06     0.041     200     255 ..      35      87 ..      16     136 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.9e-06
  Effector_1 200 kdlksaekAkekvkellkrvea.dkkltteqkaklkdelngYadeleaiveqLaelk 255
                 + l+sa        + l+ ++a d++lt+ ++++  ++ n+Y+++l+ i   L    
  KHJ32361.1  35 RLLRSAG----LAMQTLSTIQApDNRLTSHRRQQFEENCNSYLQTLQTIDVALFRQI 87 
                 3333343....44455666766377**********************9977766555 PP

>> LemA  LemA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.6e-05     0.095      87     144 ..      47     105 ..      20     109 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.6e-05
        LemA  87 qeelegtEnriav.aRrrYneavreyntkiesfpsnivaklfgfkekelfeaeeaerea 144
                  ++++  +nr++  +R+++ e+ ++y ++++++   ++ +++g++e+++  a+++++e+
  KHJ32361.1  47 LSTIQAPDNRLTShRRQQFEENCNSYLQTLQTIDVALFRQIHGLEEANIIPADKSKKEK 105
                 456777788886516789*******************************9998877554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       750  (0.0418317); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1435.72
//
Query:       KHJ32362.1  [L=729]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.2e-41  138.2  29.5    3.3e-07   30.9   1.3    7.1  6  WD40         WD domain, G-beta repeat
    2.9e-37  127.8   1.8    4.9e-37  127.1   1.8    1.4  1  TFIID_NTD2   WD40 associated region in TFIID subunit, NTD2 do
    7.2e-11   42.2   0.4       0.24   11.7   0.0    5.4  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    5.1e-07   29.4   0.0    1.3e-06   28.1   0.0    1.7  1  LisH         LisH
    1.1e-05   24.9   0.0       0.04   13.2   0.0    2.4  2  RAB3GAP2_N   Rab3 GTPase-activating protein regulatory subuni
     0.0029   16.3   0.0       0.53    8.9   0.0    2.6  2  Nup160       Nucleoporin Nup120/160
  ------ inclusion threshold ------
      0.042   13.7   0.0       0.21   11.5   0.0    2.0  3  eIF2A        Eukaryotic translation initiation factor eIF2A
      0.089   13.1   0.9       0.29   11.4   0.9    1.9  1  CBM_25       Carbohydrate binding domain (family 25)
       0.59    9.0   3.3        2.1    7.2   1.0    2.7  2  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.3   1.1e-06    0.0022       6      38 .]     365     400 ..     360     400 .. 0.83
   2 !   19.9   0.1   4.9e-07   0.00098       4      38 .]     419     468 ..     416     468 .. 0.84
   3 !   30.9   1.3   1.7e-10   3.3e-07       1      38 []     472     510 ..     472     510 .. 0.95
   4 !   29.0   0.1   6.7e-10   1.3e-06       6      37 ..     519     553 ..     514     553 .. 0.88
   5 !   26.5   0.2   4.1e-09   8.2e-06       1      38 []     558     596 ..     558     596 .. 0.96
   6 !   29.5   1.5   4.6e-10   9.3e-07       2      38 .]     601     639 ..     600     639 .. 0.92

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1.1e-06
                 EEESSSS...EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGHss...vtslafspdgawlasGsdDgtvriWd 38 
                  +t H+    +t++ fs+d++++a G++   +r+W+
  KHJ32362.1 365 MFTFHNTldcITCIEFSDDHSLIAVGTEESYIRVWS 400
                 4667844555*************************5 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 4.9e-07
                 EEEEESS.SSEEEEE..............EETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtsla..............fspdgawlasGsdDgtvriWd 38 
                  r l GH  sv++l+               s + ++l+s+s D+tvr+W+
  KHJ32362.1 419 SRRLIGHsASVYGLSfspsisgseepnsaLSTNPKLLLSCSSDKTVRLWS 468
                 67789**777****9999999998888888888888999988*******5 PP

  == domain 3  score: 30.9 bits;  conditional E-value: 1.7e-10
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++cl +++GH ++v+++++ p g+++a++++D+t+r W+
  KHJ32362.1 472 WSCLVVFKGHeGPVWDVRWGPFGHYFATCGRDRTIRAWS 510
                 689*******999***********************995 PP

  == domain 4  score: 29.0 bits;  conditional E-value: 6.7e-10
                 EEESS.SSEEEEEEETTSSEEEEEET..TSEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsd..DgtvriW 37 
                    GH +sv+ +a++p+ga+++s+sd  D+tvr+W
  KHJ32362.1 519 LMVGHdTSVNKVAWHPNGAYIFSASDlsDKTVRMW 553
                 456**999**************998777******* PP

  == domain 5  score: 26.5 bits;  conditional E-value: 4.1e-09
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g+c+r+++GH ++++++  sp+g+ las++  gt+ +Wd
  KHJ32362.1 558 GECVRVFSGHlDFISAIECSPSGKILASADCSGTIILWD 596
                 69********999**************9977*******9 PP

  == domain 6  score: 29.5 bits;  conditional E-value: 4.6e-10
                 EEEEEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ss.vtslafspdgawlasGsdDgtvriWd 38 
                 + ++t++GH ++ ++sl+fs ++++l+sG+ D+tvr Wd
  KHJ32362.1 601 SSIKTCKGHgKGgIWSLSFSVESTLLVSGGADCTVRTWD 639
                 67899****9556*************************9 PP

>> TFIID_NTD2  WD40 associated region in TFIID subunit, NTD2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.1   1.8   2.5e-40   4.9e-37       5     129 ..      85     212 ..      81     213 .. 0.97

  Alignments for each domain:
  == domain 1  score: 127.1 bits;  conditional E-value: 2.5e-40
                 HHHHHHHHHHHHHHHTS-HHHHHHHGGGHHHHHHHHHHHHHHTT-HHHHHHHHHHHGGGGGGGHH.HHHHHTT--SHHHHHHSHHHHHHHHS-EEEEEE CS
  TFIID_NTD2   5 ekyekayelLkkwiessldiykpeLsrllyPvFvhlyLelvakgaeeeakkFfekfkedhealhkedlkkLasisspehleenelakafrenkyrikls 103
                  ky++a++lL +wies+ldiyk+eL+rl +P+Fv++yL+lv+++a  e + Ff++f++++e+lh++++++++ ++ p h+++n++ak + en+y+++l+
  KHJ32362.1  85 LKYRRAFKLLLNWIESNLDIYKFELNRLPWPIFVYSYLSLVRDEAVVEKEIFFNEFSSKFEKLHADEIREFSLVTLPTHVNANPTAKLYCENRYKLPLN 183
                 589************************************************************************************************ PP

                 HHHHHHHHHHHHHTT-H...HHHHHHHHH CS
  TFIID_NTD2 104 kaafelLlrfLeekeka...vllkilneh 129
                 ++++ +L++fLe++ k+   v+l++l+++
  KHJ32362.1 184 QHVYFNLITFLESNAKSggtVILSLLQTY 212
                 ****************9999*****9987 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0012       2.3      36      79 ..     370     412 ..     360     435 .. 0.83
   2 ?    2.5   0.0     0.093   1.8e+02      48      90 ..     450     491 ..     445     493 .. 0.87
   3 ?    1.9   0.0      0.14   2.7e+02      34      66 ..     478     510 ..     458     519 .. 0.77
   4 !   11.7   0.0   0.00012      0.24      36      79 ..     522     567 ..     515     575 .. 0.84
   5 !   10.5   0.0   0.00029      0.58      41      90 ..     571     620 ..     562     622 .. 0.87
   6 ?    3.9   0.0     0.034        68      38      76 ..     611     649 ..     607     656 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0012
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                  ++   +++++++ d +l+av+++++ +r+ ++ +g+ +h++  +
   KHJ32362.1 370 NTLDCITCIEFSDDHSLIAVGTEESYIRVWSM-TGEPLHAILSG 412
                  555689**********************9976.67778777555 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.093
  ANAPC4_WD40  48 pdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                   + klL    sd +vrl + e+  ++  ++ ++   v  + Wg
   KHJ32362.1 450 TNPKLLLSCSSDKTVRLWSLETWSCLVVFKGHEGP-VWDVRWG 491
                  57799999*****************9999999884.8888885 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.14
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrlld 66 
                   +++++ v +++W p g+ +a    d ++r  +
   KHJ32362.1 478 FKGHEGPVWDVRWGPFGHYFATCGRDRTIRAWS 510
                  356888999999******999999999998665 PP

  == domain 4  score: 11.7 bits;  conditional E-value: 0.00012
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLava..ysdgevrlldaesgkvvhslsvk 79 
                  ++d +v+++aW+p+g  +  a   sd +vr+    +g++v+ +s +
   KHJ32362.1 522 GHDTSVNKVAWHPNGAYIFSAsdLSDKTVRMWALTTGECVRVFSGH 567
                  57899***********996662379***************998765 PP

  == domain 5  score: 10.5 bits;  conditional E-value: 0.00029
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  +++++ +p+gk+La a   g++ l d+ +g  +++++ + +  + +l+++
   KHJ32362.1 571 ISAIECSPSGKILASADCSGTIILWDIVTGSSIKTCKGHGKGGIWSLSFS 620
                  6788889****************************999888778777776 PP

  == domain 6  score: 3.9 bits;  conditional E-value: 0.034
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  ++ + sL+++ + +lL+ + +d +vr  d+e  +  h+l
   KHJ32362.1 611 KGGIWSLSFSVESTLLVSGGADCTVRTWDIEVPTNAHKL 649
                  567889***********************9988888776 PP

>> LisH  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.0   6.5e-10   1.3e-06       1      27 []      39      65 ..      39      65 .. 0.97

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 6.5e-10
                HHHHHHHHHHHHHCT-HHHHHHHHHHT CS
        LisH  1 eeLNrLIydYLvkeGyeetAeaFekEa 27
                ++LN+++ +YLvk+Gy+ t ++++ E+
  KHJ32362.1 39 QNLNQIVIEYLVKKGYNRTEQMLRSES 65
                79************************8 PP

>> RAB3GAP2_N  Rab3 GTPase-activating protein regulatory subunit N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0   0.00034      0.68      57     102 ..     372     410 ..     346     425 .. 0.88
   2 !   13.2   0.0     2e-05      0.04     311     347 ..     572     608 ..     559     609 .. 0.94

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00034
  RAB3GAP2_N  57 ItailclplsskssqgspdwtviavGlssGylrfytengelLlsql 102
                   +i c+ +s+       d+++iavG+++ y+r+++ +ge L+  l
  KHJ32362.1 372 LDCITCIEFSD-------DHSLIAVGTEESYIRVWSMTGEPLHAIL 410
                 56788888888.......9**********************99876 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 2e-05
  RAB3GAP2_N 311 esivlsPsgrlaavtDsLgRVlLlDvqagvvvRlWKG 347
                   i +sPsg+++a +D  g ++L+D+ +g  ++  KG
  KHJ32362.1 572 SAIECSPSGKILASADCSGTIILWDIVTGSSIKTCKG 608
                 6799******************************999 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0   0.00027      0.53     228     254 ..     443     476 ..     407     481 .. 0.74
   2 !    4.6   0.0    0.0051        10     231     255 ..     537     563 ..     520     602 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00027
                 ........TTTEEEEEETT-EEEEEETTTTEEEE CS
      Nup160 228 i.......gqtylfalsrdgkLrvWnlltgkcla 254
                 +       + ++l++ s+d+++r+W+l+t +cl 
  KHJ32362.1 443 EpnsalstNPKLLLSCSSDKTVRLWSLETWSCLV 476
                 4444444478899*****************9985 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0051
                 TEEEEEE..TT-EEEEEETTTTEEEEE CS
      Nup160 231 tylfals..rdgkLrvWnlltgkclat 255
                 +y+f++s  +d+++r+W l+tg c+++
  KHJ32362.1 537 AYIFSASdlSDKTVRMWALTTGECVRV 563
                 6777776557***************97 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       4.7   9.4e+03     171     184 ..     394     407 ..     376     411 .. 0.79
   2 ?   11.5   0.0    0.0001      0.21      81     164 ..     460     545 ..     454     565 .. 0.78
   3 ?    4.7   0.0     0.012        24      58     141 ..     523     606 ..     509     609 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 4.7
                 -EEEEEETTTEEEE CS
       eIF2A 171 ngfkiwsysGklvy 184
                   +++ws++G+ ++
  KHJ32362.1 394 SYIRVWSMTGEPLH 407
                 45789999998877 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.0001
                 SSCEEEEEECS...CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--..EEEE-TTSSEEEEEE-T CS
       eIF2A  81 mpakvslfdlk...vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanat..lvewspdgryvlTatta 164
                 ++++v l++l+   + v++k +e +   + + p+g++++++G   +   +  w +++++ +  +   +++  +v w+p+g y+  a+  
  KHJ32362.1 460 SDKTVRLWSLEtwsCLVVFKGHEGPVWDVRWGPFGHYFATCGRDRT---IRAWSQDHISFLRLMVGHDTSvnKVAWHPNGAYIFSASDL 545
                 677888888866669999999999******************8887...999*9997777776665555522699*******9998765 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.012
                 SSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECS...CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEE CS
       eIF2A  58 kegpihdvaWspkskefaviyGkmpakvslfdlk...vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiaka 141
                 ++  +  vaW p++  +      ++++v ++ l+   +  +++ + +   +i  sp+gk+++ a   + +G++ +wd  + ++i++ 
  KHJ32362.1 523 HDTSVNKVAWHPNGAYIFSASDLSDKTVRMWALTtgeCVRVFSGHLDFISAIECSPSGKILASA---DCSGTIILWDIVTGSSIKTC 606
                 4556888899999998888888889999999885544777777777778888899999998888...56788888888887777765 PP

>> CBM_25  Carbohydrate binding domain (family 25)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.9   0.00015      0.29      47      96 ..     638     688 ..     608     698 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00015
      CBM_25  47 akkdvdlGaassleaafndGnnvwdsnktk.dyslsaGvstvadntvtada 96 
                 + ++v   a    e     Gnn+ d+n+t    ++++G++t + +t+++ +
  KHJ32362.1 638 WDIEVPTNAHKLAEGEVVSGNNQADNNRTSpSSTVPSGTTTNTSATSGTKK 688
                 5555555555556777889*********9835689*********9999754 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   1.0    0.0011       2.1     181     282 ..     365     477 ..     334     482 .. 0.59
   2 ?   -0.3   0.1       0.2     4e+02     144     216 ..     550     597 ..     517     648 .. 0.46

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0011
    Ge1_WD40 181 llkieehs.liveaafspdGtalatasedGevkffqvylede.......eeprCLheWkPhdGkslssllfldnhke..esd..eqfWrfaitgadnns 267
                 ++ ++++  +i++  fs d   +a+ +e+ +++ + +  e         ++p    +   h   s+  l f   +    e++   +    ++ +++ ++
  KHJ32362.1 365 MFTFHNTLdCITCIEFSDDHSLIAVGTEESYIRVWSMTGEPLhailsgeNQPTNSRRLIGHS-ASVYGLSFSPSISGseEPNsaLSTNPKLLLSCSSDK 462
                 55566664477777788888888888888888877654221122233323333333333332.233334444433321122200233334556777889 PP

    Ge1_WD40 268 elklWscelWtClqt 282
                  ++lWs e+W+Cl  
  KHJ32362.1 463 TVRLWSLETWSCLVV 477
                 9***********965 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.2
    Ge1_WD40 144 skllvltrgdkaeiws..vdmiaskygsgelsveeieegllkieehsliveaafspdGtalatasedGevkffqv 216
                  ++ +lt g+ + ++s  +d i+                               sp G  la a   G++ ++ +
  KHJ32362.1 550 VRMWALTTGECVRVFSghLDFIS---------------------------AIECSPSGKILASADCSGTIILWDI 597
                 44444444444444432222222...........................2223333333333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (729 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       651  (0.0363099); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 5065.02
//
Query:       KHJ32363.1  [L=280]
Description: putative transcriptional activator hac1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-07   30.7  16.7    3.9e-07   30.1  16.7    1.4  1  bZIP_1    bZIP transcription factor
    1.1e-06   28.5  20.2    2.6e-06   27.4  20.2    1.6  1  bZIP_2    Basic region leucine zipper
     0.0029   18.1  11.0      0.014   15.9  11.5    1.8  2  bZIP_Maf  bZIP Maf transcription factor
  ------ inclusion threshold ------
      0.066   12.5   4.5       0.09   12.0   4.5    1.1  1  MPS2      Monopolar spindle protein 2
      0.085   12.1   2.8       0.12   11.7   2.8    1.1  1  Frigida   Frigida-like protein
      0.097   13.2   7.7       0.15   12.6   7.7    1.2  1  APG6_N    Apg6 coiled-coil region
       0.64    8.2   9.2       0.91    7.7   9.2    1.1  1  DUF390    Protein of unknown function (DUF390)


Domain annotation for each model (and alignments):
>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1  16.7   1.5e-10   3.9e-07       1      62 [.     103     164 ..     103     166 .. 0.94

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 1.5e-10
                 XXXXXXXXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelKrekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekLksk 62 
                 eke +r  r ++NR aA+ sR+RK++e+e+Le +  a+e +N++L  +l  l+ ++  L+++
  KHJ32363.1 103 EKEQRRVERVLRNRRAAQSSRERKRQEVEALEAEKRAIERKNMDLEMRLADLRAKYHLLQME 164
                 7999*************************************************999977776 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4  20.2     1e-09   2.6e-06       2      53 ..     104     156 ..     103     157 .. 0.95

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 1e-09
                 XXXXXXXXX.XXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2   2 ddeyrerRr.kNreAarrsRekkkakeeeleervkeLeeeNaqLrqkveqLek 53 
                 ++++r++R  +Nr+Aa++sRe+k+++ e le +    e++N+ L+ +++ L++
  KHJ32363.1 104 KEQRRVERVlRNRRAAQSSRERKRQEVEALEAEKRAIERKNMDLEMRLADLRA 156
                 6899********************************************99975 PP

>> bZIP_Maf  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.9   4.7e+03      14      32 ..      60      78 ..      59      83 .. 0.85
   2 !   15.9  11.5   5.4e-06     0.014      22      85 ..     100     162 ..      89     167 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.9
    bZIP_Maf 14 fnrflrglteeeverLKqr 32
                fn +l g+t++e +  K+r
  KHJ32363.1 60 FNAKLPGITSPEKKLVKKR 78
                8999999999999998887 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 5.4e-06
    bZIP_Maf  22 teeeverLKqrRRrlKNrgyakscrkrrlqqkeelekekeeleeelerlqqelsrlrqekdalk 85 
                 te+e e  ++  R l+Nr +a+s+r+r+ q+ e le+ek+  e+++  l+ +l+ lr+++  l+
  KHJ32363.1 100 TEDEKE-QRRVERVLRNRRAAQSSRERKRQEVEALEAEKRAIERKNMDLEMRLADLRAKYHLLQ 162
                 444444.3666689****************************************9999887665 PP

>> MPS2  Monopolar spindle protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   4.5   3.5e-05      0.09     128     222 ..      88     180 ..      65     191 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.5e-05
        MPS2 128 kdslstprkkilldllkkqesPeklrrsnrklkaLevrveslkdELeakdevlrekeRelleLkkrlseykekYellqrefs.lykarrveksqns 222
                 + +   prk+    + + +++ +++ r +r  +a +   e  ++E+ea +   r  eR+ ++L+ rl +++ kY+llq e + +  +++ + s  +
  KHJ32363.1  88 PKTNLPPRKR---AKTEDEKEQRRVERVLRNRRAAQSSRERKRQEVEALEAEKRAIERKNMDLEMRLADLRAKYHLLQMEMEwFDCGKNSHRSYSG 180
                 4444455555...3344445556677778888888888888888999999999999************************9966666666655544 PP

>> Frigida  Frigida-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.8   4.5e-05      0.12     219     279 ..     103     163 ..      89     168 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.5e-05
     Frigida 219 keskksakkilkegnnsaaqkeanekelaaLkavikcieehkleselplesLkkriaqLek 279
                 ++ ++ ++++l++ ++++++ e +++e++aL a  + ie+++++ e+ l +L+++ + L+ 
  KHJ32363.1 103 EKEQRRVERVLRNRRAAQSSRERKRQEVEALEAEKRAIERKNMDLEMRLADLRAKYHLLQM 163
                 55566779999999999************************************99988865 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   7.7   5.9e-05      0.15      44     114 ..      90     167 ..      68     177 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 5.9e-05
      APG6_N  44 k.......qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynelqlelle 114
                 +        ++e+e+ ++++e++ + ++++++  ++  +e e+leae +a+e++  +le   +    +y+ lq+e++ 
  KHJ32363.1  90 TnlpprkrAKTEDEKEQRRVERVLRNRRAAQSSRERKRQEVEALEAEKRAIERKNMDLEMRLADLRAKYHLLQMEMEW 167
                 044555556778888899999999999999999999999999999999999999999999999999999999998765 PP

>> DUF390  Protein of unknown function (DUF390)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   9.2   0.00036      0.91     580     645 ..      92     159 ..      85     161 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00036
      DUF390 580 laereraleeaeaaaqrladslslrkaare..eqarrnlegirakraaleqrvaelearekeldarer 645
                 l  r+ra  e e   +r+   l  r+aa+   e+ r+++e++ a++ a+e++  +le r  +l a+ +
  KHJ32363.1  92 LPPRKRAKTEDEKEQRRVERVLRNRRAAQSsrERKRQEVEALEAEKRAIERKNMDLEMRLADLRAKYH 159
                 6779************************96337778899*********************99999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1415  (0.0789224); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.49u 0.29s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2011.06
//
Query:       KHJ32364.1  [L=216]
Description: putative trna-specific adenosine deaminase 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-22   79.7   0.1    2.2e-22   78.9   0.1    1.4  1  dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-
    2.4e-16   59.8   0.0    2.5e-15   56.4   0.0    2.0  1  MafB19-deam      MafB19-like deaminase
     0.0038   17.3   0.5      0.014   15.5   0.5    1.8  1  Bd3614-deam      Bd3614-like deaminase
  ------ inclusion threshold ------
      0.048   13.6   0.1      0.077   12.9   0.1    1.2  1  APOBEC_N         APOBEC-like N-terminal domain
      0.065   13.2   1.0        1.3    9.0   0.0    2.3  2  APOBEC4_like     APOBEC4-like -AID/APOBEC-deaminase
       0.11   12.7   1.2       0.73   10.0   1.2    2.1  1  SNAD4            Secreted Novel AID/APOBEC-like Deaminase 4


Domain annotation for each model (and alignments):
>> dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.9   0.1   7.2e-26   2.2e-22      15     100 ..      12     129 ..       4     130 .. 0.92

  Alignments for each domain:
  == domain 1  score: 78.9 bits;  conditional E-value: 7.2e-26
                      HHHHHTTTSCSEEEEEEETTEEEEEEESBHHCCTGTTB-HHHHHHHHHHHHT.SSCE...............................TTEEEE CS
  dCMP_cyt_deam_1  15 akeaqkcsnfkVGavivkngeiistgyngepaggsktiHAEvnAilkaakng.gskl...............................egatly 76 
                      a+ a ++s+++VG+v+v +++iis+g+n ++++ + t HAE +Ai ++ +++ +++                                 ++tly
       KHJ32364.1  12 AESALEKSETPVGCVLVYEDRIISRGMNDTNRSFNGTRHAEFIAIDNFISQKaCCSTesdnmrntkpaqandyssiqlsqikysldilVNCTLY 105
                      4444599***********99*****************************995566668************************************ PP

                      EEE--BHHHHHHHHHHT-SEEEEE CS
  dCMP_cyt_deam_1  77 vtlePCsmCakaiiqsgikkvvvg 100
                      vt+ePC mCa ++ q+gik+v++g
       KHJ32364.1 106 VTVEPCIMCASLLRQIGIKRVFFG 129
                      *********************997 PP

>> MafB19-deam  MafB19-like deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.4   0.0   8.3e-19   2.5e-15      11     119 ..       9     154 ..       4     171 .. 0.87

  Alignments for each domain:
  == domain 1  score: 56.4 bits;  conditional E-value: 8.3e-19
  MafB19-deam  11 laevekatkikedkigavivkdkkviargsnekelnakataHaEi...............................aalqqAakklkskrlddatlyv 77 
                   +++e a++++e ++g+v v ++++i rg n+++   + t HaE                                 ++q    k +   l ++tlyv
   KHJ32364.1   9 FSQAESALEKSETPVGCVLVYEDRIISRGMNDTNRSFNGTRHAEFiaidnfisqkaccstesdnmrntkpaqandySSIQLSQIKYSLDILVNCTLYV 106
                  5799****************************************99*****************************999**9999999999******** PP

  MafB19-deam  78 tlepCdmCagaivqaglkklvygagnpks......lnkLkvkekngrv 119
                  t+epC mCa ++ q g+k++ +ga n+ +      +++  ++  n + 
   KHJ32364.1 107 TVEPCIMCASLLRQIGIKRVFFGAWNERFggtgsvISVHRTEGTNRET 154
                  *************************99998885544444444444444 PP

>> Bd3614-deam  Bd3614-like deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.5   4.6e-06     0.014      30      98 ..      44     122 ..      20     130 .. 0.61

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 4.6e-06
  Bd3614-deam  30 aenkvLHAEvnLlapllreeavdsdteddeiadrdgdgeeerrple...........egarllvtlqcCkmCAalvvaaa 98 
                  + n + HAE+  +     ++a  + te d++ + + +  ++  +++            + +l+vt ++C mCA+l+ +++
   KHJ32364.1  44 SFNGTRHAEFIAIDNFISQKA-CCSTESDNMRNTKPAQANDYSSIQlsqikysldilVNCTLYVTVEPCIMCASLLRQIG 122
                  447777777777777666664.445555555554444333333322111111111115789*************987766 PP

>> APOBEC_N  APOBEC-like N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   2.6e-05     0.077       4      94 ..       8     120 ..       6     125 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.6e-05
                 HH--SSSGTT--S-E.EEEEEEEEESSSEEEEEEEEEEE-..SS...TBCHHHHHHHHHHHH.T--.T............................TEE CS
    APOBEC_N   4 hfknvrkasgrkktf.lcyeVkrssgkrklskkGvLrnqsgaaa...skHaEelflediedq.elrep............................kkk 69 
                 +f++ ++a ++ +t   c  V ++   r + ++G+ ++ +   +    +HaE + + ++ +q + +++                            +  
  KHJ32364.1   8 QFSQAESALEKSETPvGCVLVYED---RII-SRGM-NDTNR--SfngTRHAEFIAIDNFISQkACCSTesdnmrntkpaqandyssiqlsqikyslDIL 99 
                 566666666666666556666665...332.4555.22222..123579*****99999999555543588999******************9999999 PP

                 EEEEEEESS-S-HH....HHHHHHH CS
    APOBEC_N  70 yeitlYvswsPChessdeCaeklaa 94 
                 ++ tlYv++ PC      Ca+ l +
  KHJ32364.1 100 VNCTLYVTVEPCIM----CASLLRQ 120
                 9*************....*998876 PP

>> APOBEC4_like  APOBEC4-like -AID/APOBEC-deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0   0.00043       1.3       9      56 ..      23      67 ..      15      83 .. 0.84
   2 ?    2.4   0.3     0.048   1.4e+02      56      74 ..     101     119 ..      91     126 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00043
  APOBEC4_like  9 keiyllyeiqwggrgkiyrnrteksklehaevnflekirserkkvsct 56
                     +l+ye +  +rg   +nr +++ ++hae   ++++ s+  k +c+
    KHJ32364.1 23 VGCVLVYEDRIISRGMNDTNR-SFNGTRHAEFIAIDNFISQ--KACCS 67
                  5566899999999********.99999************96..55554 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.048
  APOBEC4_like  56 tivwylsispCaecskrll 74 
                   + ++y+ + pC+ c++ l+
    KHJ32364.1 101 NCTLYVTVEPCIMCASLLR 119
                   5689**********98776 PP

>> SNAD4  Secreted Novel AID/APOBEC-like Deaminase 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.2   0.00025      0.73      31      62 ..      91     120 ..      30     125 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00025
       SNAD4  31 kikseldpsqeyrvtwylswsPCaeCaekiae 62 
                 +i  +++ +  ++ t+y+++ PC  Ca+ +++
  KHJ32364.1  91 QI--KYSLDILVNCTLYVTVEPCIMCASLLRQ 120
                 33..4444555889*************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1569.61
//
Query:       KHJ32365.1  [L=294]
Description: putative chromosome segregation in meiosis protein 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      9e-30  102.5   0.4    1.4e-29  101.9   0.4    1.3  1  Swi3      Replication Fork Protection Component Swi3


Domain annotation for each model (and alignments):
>> Swi3  Replication Fork Protection Component Swi3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.9   0.4   7.7e-34   1.4e-29       1      82 [.      75     156 ..      75     157 .. 0.98

  Alignments for each domain:
  == domain 1  score: 101.9 bits;  conditional E-value: 7.7e-34
        Swi3   1 kldeerLlsekGlpaLrknfkklkfkgkgheaedlkkllqfyqlWahrLfPkakfkdflekveklgkkkevktyrkelreee 82 
                 klde+ L+s+ G+p+L+ ++k+lkfkgkg e++d+++ll++yqlW+++LfPka+f d+l++veklg+kk+++t+r  +++e 
  KHJ32365.1  75 KLDENLLISPAGIPKLQSKAKSLKFKGKGYEFSDISNLLHMYQLWLDDLFPKARFLDALAQVEKLGHKKQIQTMRLSWINES 156
                 8******************************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2261.55
//
Query:       KHJ32366.1  [L=308]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2210.29
//
Query:       KHJ32367.1  [L=231]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.038   14.4   0.0       0.11   13.0   0.0    1.7  1  SAPIS-gp6      Pathogenicity island protein gp6 in Staphyloco
      0.098   12.2   0.6        1.4    8.4   0.1    2.1  2  Peptidase_A2B  Ty3 transposon peptidase
       0.17   11.2   0.0       0.26   10.6   0.0    1.3  1  RE_HpaII       HpaII restriction endonuclease


Domain annotation for each model (and alignments):
>> SAPIS-gp6  Pathogenicity island protein gp6 in Staphylococcus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.8e-05      0.11       7      33 ..      84     110 ..      81     113 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.8e-05
   SAPIS-gp6   7 lentkKvAkalkLneeDknlLieAvdl 33 
                 le+ + + kal ++e+D   Li+Avd+
  KHJ32367.1  84 LESSRWATKALTISEKDSTPLINAVDK 110
                 789999*******************95 PP

>> Peptidase_A2B  Ty3 transposon peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.1   0.00024       1.4      24      72 ..      29      77 ..      10     110 .. 0.84
   2 ?    2.6   0.1     0.014        86      90     172 ..     138     221 ..     112     227 .. 0.63

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00024
  Peptidase_A2B 24 hyiaipemdktaektikikntkvktlfdsgsptsfirrdivellkleiy 72
                    ++aip+m+  ae+t +++  +vk  + +   t +i    +e+++ ei 
     KHJ32367.1 29 IFLAIPDMQSRAEHTGRLHRHRVKVKISTLPATKYIFTVNIEMIDEEID 77
                   489**********************999999999999888888887775 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.014
  Peptidase_A2B  90 tseavtldlkvddlqitlaayvldkmdyqllignp.ilrrypkllytvlntkestdalkpkayr.setvnyvkaksagnrgnsrn 172
                    + e v +dl + +    +++      d   +i n   l   p ll  v   k++      k    + ++n vk+  a     s+n
     KHJ32367.1 138 SEEPVVVDLCISQASS-ITSSTNMSHDAPTVIENTrTLTCPPELLAVVEAEKRCVAQTAAKIEAcTVAINSVKTALATLATSSQN 221
                    2467888888876543.22333334466677777526777888888888889998777777654145789999988876666655 PP

>> RE_HpaII  HpaII restriction endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   4.4e-05      0.26     196     232 ..      50      86 ..      28     115 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 4.4e-05
    RE_HpaII 196 elggklkyakvedkvfrsNLllidsslprilAemlrl 232
                 ++++k++     + +f  N+ +id++++r++A  l  
  KHJ32367.1  50 RVKVKISTLPATKYIFTVNIEMIDEEIDRLIAIGLES 86 
                 44566666677899******************87764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1662.13
//
Query:       KHJ32368.1  [L=194]
Description: putative secreted effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       797  (0.0444531); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1485.10
//
Query:       KHJ32369.1  [L=1427]
Description: putative microtubule associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-22   79.7   8.1    1.3e-22   79.7   8.1   12.0 13  Cnn_1N        Centrosomin N-terminal motif 1
    3.9e-10   39.9   5.4    3.9e-10   39.9   5.4    9.6 12  Mto2_bdg      Micro-tubular organiser Mto1 C-term Mto2-bindin
  ------ inclusion threshold ------
       0.63   10.3  41.4        4.1    7.7   0.3    9.0  7  HALZ          Homeobox associated leucine zipper
        1.7    9.0  12.9         25    5.2   3.4    5.4  5  DUF2935       Domain of unknown function (DUF2935)
        8.6    6.3  18.2        0.4   10.5   1.0    4.7  4  Rop-like      Rop-like


Domain annotation for each model (and alignments):
>> Cnn_1N  Centrosomin N-terminal motif 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.7   8.1   3.5e-26   1.3e-22       1      72 [.     415     486 ..     415     487 .. 0.99
   2 ?   -0.4   1.0      0.36   1.3e+03      36      71 ..     513     548 ..     501     557 .. 0.60
   3 ?    1.8   0.3     0.077   2.8e+02      31      52 ..     589     609 ..     577     612 .. 0.68
   4 ?    4.2   0.8     0.014        50      38      70 ..     660     692 ..     652     708 .. 0.85
   5 !    9.3   1.0   0.00034       1.2      29      68 ..     740     779 ..     738     784 .. 0.91
   6 ?   -2.8   5.6         2   7.2e+03      35      68 ..     839     874 ..     785     886 .. 0.58
   7 ?   -1.2   8.2      0.64   2.3e+03      15      69 ..     863     917 ..     839     925 .. 0.46
   8 ?    0.3   3.9      0.22   7.9e+02      26      51 ..     896     920 ..     891     961 .. 0.67
   9 ?   -1.3   7.4      0.72   2.6e+03      26      69 ..     973    1016 ..     930    1019 .. 0.66
  10 ?    3.4   0.5     0.024        87      22      70 ..    1029    1080 ..    1024    1083 .. 0.80
  11 ?   -2.3   0.7       1.4   5.1e+03      46      67 ..    1158    1172 ..    1133    1180 .. 0.54
  12 ?   -2.7   0.1         2   7.1e+03      43      67 ..    1235    1259 ..    1223    1262 .. 0.72
  13 ?    1.2   3.0      0.12   4.3e+02      26      70 ..    1379    1426 ..    1373    1427 .] 0.61

  Alignments for each domain:
  == domain 1  score: 79.7 bits;  conditional E-value: 3.5e-26
      Cnn_1N   1 TlrEqeeqidkLkKENFdLKLriyfLeerleklseeqkeellkenielkveveslqkelkekkkllreaeka 72 
                 Tl+Eq+++i++L+KENFdLKL+++fL +rl+klsee ++++++en+elk+ ++ +q+++k+++++++e+ek+
  KHJ32369.1 415 TLKEQSSTIERLSKENFDLKLKVMFLSDRLDKLSEEGVKDMISENVELKTGLAVMQRDNKALRRKVKELEKK 486
                 9*********************************************************************97 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.36
      Cnn_1N  36 eqkeellkenielkveveslqkelkekkkllreaek 71 
                 e++ e ++e i l++++++   e++++k    + ek
  KHJ32369.1 513 ESSYEREEEIIYLREKIQEYVTEIEKLKSDAASKEK 548
                 455555556666666666666666666554444443 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.077
      Cnn_1N  31 eklseeqkeellkenielkvev 52 
                 e+++ ++++ l++en  lk e 
  KHJ32369.1 589 ERIN-DENKRLHEENARLKSES 609
                 3333.58888888888888875 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.014
      Cnn_1N  38 keellkenielkveveslqkelkekkkllreae 70 
                 +++l +e   l++e+++l++e+ + + +l++ +
  KHJ32369.1 660 VDDLKRESEHLRQENANLRREVGAQTSMLTSRN 692
                 578899999999999999999998888887655 PP

  == domain 5  score: 9.3 bits;  conditional E-value: 0.00034
      Cnn_1N  29 rleklseeqkeellkenielkveveslqkelkekkkllre 68 
                 rl++l++ ++eel+++n el++ + sl+ +++ ++++l++
  KHJ32369.1 740 RLTNLDDAEREELESKNAELRDGINSLKIQNQDLHRELES 779
                 7999999**************************9999976 PP

  == domain 6  score: -2.8 bits;  conditional E-value: 2
      Cnn_1N  35 e..eqkeellkenielkveveslqkelkekkkllre 68 
                 +  ++ +e+ +e   l++ev +     +++++++r+
  KHJ32369.1 839 SisRELDEANAEIERLQIEVTDTSENFNSLQNEMRD 874
                 233333333444444444444444444444444444 PP

  == domain 7  score: -1.2 bits;  conditional E-value: 0.64
      Cnn_1N  15 ENFd.LKLriyfLeerleklseeqkeellkenielkveveslqkelkekkkllrea 69 
                 ENF+ L+ +   + ++l +l++ ++e   +    l+ e+e+  +el++++k+l ea
  KHJ32369.1 863 ENFNsLQNEMRDMSQALVRLED-DHEFNTRRIGGLEKELEEANRELEQLEKSLVEA 917
                 3332233333333333333333.222222223345555555555555555555555 PP

  == domain 8  score: 0.3 bits;  conditional E-value: 0.22
      Cnn_1N  26 Leerleklseeqkeellkenielkve 51 
                 Le++le+ +  + e+l+k+++e  ++
  KHJ32369.1 896 LEKELEEANR-ELEQLEKSLVEANEK 920
                 4444444433.444444444444444 PP

  == domain 9  score: -1.3 bits;  conditional E-value: 0.72
      Cnn_1N   26 Leerleklseeqkeellkenielkveveslqkelkekkkllrea 69  
                  L +r+   +++    + ke  e ++++ +l +el + +++ +++
  KHJ32369.1  973 LSQRFSSERSQREALAAKEKKESQQHINQLNRELTSAREEAKRL 1016
                  44444444446666678999999999999999999999887766 PP

  == domain 10  score: 3.4 bits;  conditional E-value: 0.024
      Cnn_1N   22 riyfLeerleklse...eqkeellkenielkveveslqkelkekkkllreae 70  
                  ++  Lee+l         ++ + l++  +l+ e+e+  ++l++ k++l +  
  KHJ32369.1 1029 KLVDLEEQLRTALGeidGTRSSFLQSIAKLHHELEDTVHDLDRAKESLAQKD 1080
                  5566777766554457779999999999*******************99865 PP

  == domain 11  score: -2.3 bits;  conditional E-value: 1.4
      Cnn_1N   46 ielkveveslqkelkekkkllr 67  
                   +       l+ ++ e+++ll 
  KHJ32369.1 1158 NQ-------LKEQMTERNQLLL 1172
                  22.......3333333444444 PP

  == domain 12  score: -2.7 bits;  conditional E-value: 2
      Cnn_1N   43 kenielkveveslqkelkekkkllr 67  
                  +   +l  e + l+  l++++k+l+
  KHJ32369.1 1235 SVEKDLWKEYQALESNLEARTKKLD 1259
                  5555777788888888888888876 PP

  == domain 13  score: 1.2 bits;  conditional E-value: 0.12
      Cnn_1N   26 Leerleklse...eqkeellkenielkveveslqkelkekkkllreae 70  
                  Le + +  +e    +++++ + + e  +e+++l +e++++k +++  +
  KHJ32369.1 1379 LEGKYKSEREariMDRTAARQRLDEKNQENQELVQEIERLKSSIQMTQ 1426
                  555555555555555566666666777777777777777777776655 PP

>> Mto2_bdg  Micro-tubular organiser Mto1 C-term Mto2-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0         5   1.8e+04      31      42 ..     423     434 ..     419     435 .. 0.75
   2 ?   -4.1   0.0         5   1.8e+04      34      46 ..     455     467 ..     452     471 .. 0.78
   3 !    6.3   0.5    0.0032        12       6      29 ..     480     503 ..     475     506 .. 0.86
   4 ?   -1.9   0.5       1.2   4.3e+03      39      50 ..     596     607 ..     586     611 .. 0.53
   5 ?   -0.4   0.9      0.42   1.5e+03      32      45 ..     668     681 ..     663     688 .. 0.82
   6 ?    1.6   2.2       0.1   3.6e+02      15      46 ..     747     778 ..     739     780 .. 0.83
   7 ?   -0.6   0.1      0.46   1.6e+03      17      42 ..     830     855 ..     826     860 .. 0.80
   8 ?   -1.8   1.2       1.2   4.2e+03      26      44 ..     895     913 ..     872     921 .. 0.70
   9 ?   -1.3   5.8      0.81   2.9e+03       4      46 ..     968    1007 ..     967    1017 .. 0.64
  10 ?   -2.2   0.1       1.5   5.2e+03       2      14 ..    1026    1038 ..    1025    1063 .. 0.81
  11 ?   -4.6   0.7         5   1.8e+04      31      50 ..    1090    1109 ..    1088    1110 .. 0.67
  12 !   39.9   5.4   1.1e-13   3.9e-10       1      51 [.    1371    1421 ..    1371    1422 .. 0.97

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 5
    Mto2_bdg  31 LeelkaeNrlLk 42 
                 +e l +eN +Lk
  KHJ32369.1 423 IERLSKENFDLK 434
                 677888888886 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 5
    Mto2_bdg  34 lkaeNrlLkaeLe 46 
                  + eN +Lk+ L+
  KHJ32369.1 455 MISENVELKTGLA 467
                 5689*****9886 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.0032
    Mto2_bdg   6 LreLerqLkaereaRlldrsgare 29 
                  +eLe++Lkae ++ ++  s+ + 
  KHJ32369.1 480 VKELEKKLKAEEDRPSTSHSSTTN 503
                 58**********999999888775 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 1.2
    Mto2_bdg  39 rlLkaeLerdrs 50 
                 ++L  e +r++s
  KHJ32369.1 596 KRLHEENARLKS 607
                 444444333333 PP

  == domain 5  score: -0.4 bits;  conditional E-value: 0.42
    Mto2_bdg  32 eelkaeNrlLkaeL 45 
                 e l++eN++L++e 
  KHJ32369.1 668 EHLRQENANLRREV 681
                 7899*******996 PP

  == domain 6  score: 1.6 bits;  conditional E-value: 0.1
    Mto2_bdg  15 aereaRlldrsgarerLeelkaeNrlLkaeLe 46 
                 aere     +   r  ++ lk +N++L +eLe
  KHJ32369.1 747 AEREELESKNAELRDGINSLKIQNQDLHRELE 778
                 67777777777788889999999999999997 PP

  == domain 7  score: -0.6 bits;  conditional E-value: 0.46
    Mto2_bdg  17 reaRlldrsgarerLeelkaeNrlLk 42 
                 +e ++    +++ +L+e +ae ++L+
  KHJ32369.1 830 KEEAQQEILSISRELDEANAEIERLQ 855
                 67777778899*******99988887 PP

  == domain 8  score: -1.8 bits;  conditional E-value: 1.2
    Mto2_bdg  26 garerLeelkaeNrlLkae 44 
                 g  ++Lee ++e ++L+  
  KHJ32369.1 895 GLEKELEEANRELEQLEKS 913
                 6677777777777777655 PP

  == domain 9  score: -1.3 bits;  conditional E-value: 0.81
    Mto2_bdg    4 eRLreLerqLkaereaRlldrsgarerLeelkaeNrlLkaeLe 46  
                  eR ++L ++  +er   ++    a+e+ e ++  N+ L +eL 
  KHJ32369.1  968 ERFKDLSQRFSSERS--QREALAAKEKKESQQHINQ-LNRELT 1007
                  79************4..4445555555444444443.444444 PP

  == domain 10  score: -2.2 bits;  conditional E-value: 1.5
    Mto2_bdg    2 wleRLreLerqLk 14  
                  w + L +Le qL+
  KHJ32369.1 1026 WKQKLVDLEEQLR 1038
                  8889999**9997 PP

  == domain 11  score: -4.6 bits;  conditional E-value: 5
    Mto2_bdg   31 LeelkaeNrlLkaeLerdrs 50  
                  Le++  e r+L+  L ++r+
  KHJ32369.1 1090 LENQALEARKLADILDKERQ 1109
                  56666677777777777775 PP

  == domain 12  score: 39.9 bits;  conditional E-value: 1.1e-13
    Mto2_bdg    1 kwleRLreLerqLkaereaRlldrsgarerLeelkaeNrlLkaeLerdrsh 51  
                  kw  RL  Le + k+ereaR  dr+ ar+rL+e+++eN++L  e+er++s+
  KHJ32369.1 1371 KWAIRLFQLEGKYKSEREARIMDRTAARQRLDEKNQENQELVQEIERLKSS 1421
                  8999********************************************985 PP

>> HALZ  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1     0.087   3.1e+02      20      42 ..     422     444 ..     420     445 .. 0.87
   2 ?    5.1   2.0    0.0075        27      24      42 ..     469     487 ..     461     488 .. 0.86
   3 ?    7.7   0.3    0.0011       4.1      18      40 ..     585     607 ..     575     610 .. 0.83
   4 ?    7.3   0.6    0.0015       5.5      15      36 ..     661     682 ..     660     689 .. 0.89
   5 ?    3.1   0.6     0.032   1.1e+02      26      39 ..     693     706 ..     687     708 .. 0.92
   6 ?    3.1   0.5     0.031   1.1e+02      21      37 ..     763     779 ..     749     782 .. 0.84
   7 ?    4.7   1.6    0.0099        36      25      40 ..    1405    1420 ..    1400    1423 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.087
        HALZ  20 dydsLkkenekLkaelqeLkekl 42 
                   + L ken  Lk +++ L+++l
  KHJ32369.1 422 TIERLSKENFDLKLKVMFLSDRL 444
                 5689*************999887 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0075
        HALZ  24 LkkenekLkaelqeLkekl 42 
                 ++++n++L+ +++eL +kl
  KHJ32369.1 469 MQRDNKALRRKVKELEKKL 487
                 799**************98 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0011
        HALZ  18 ksdydsLkkenekLkaelqeLke 40 
                 +s+++ +++en++L+ e ++Lk+
  KHJ32369.1 585 TSRCERINDENKRLHEENARLKS 607
                 78999999999999999999997 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.0015
        HALZ  15 daLksdydsLkkenekLkaelq 36 
                 d Lk + + L++en +L+ e+ 
  KHJ32369.1 661 DDLKRESEHLRQENANLRREVG 682
                 89******************95 PP

  == domain 5  score: 3.1 bits;  conditional E-value: 0.032
        HALZ  26 kenekLkaelqeLk 39 
                 +e+e+L +e++eLk
  KHJ32369.1 693 REKERLYQEIEELK 706
                 8************8 PP

  == domain 6  score: 3.1 bits;  conditional E-value: 0.031
        HALZ  21 ydsLkkenekLkaelqe 37 
                  +sLk +n+ L+ el++
  KHJ32369.1 763 INSLKIQNQDLHRELES 779
                 67999********9975 PP

  == domain 7  score: 4.7 bits;  conditional E-value: 0.0099
        HALZ   25 kkenekLkaelqeLke 40  
                  ++en++L +e+++Lk+
  KHJ32369.1 1405 NQENQELVQEIERLKS 1420
                  58************97 PP

>> DUF2935  Domain of unknown function (DUF2935)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       1.3   4.6e+03      58      88 ..     488     542 ..     442     561 .. 0.53
   2 ?    5.2   3.4     0.007        25      24      95 ..     765     839 ..     763     848 .. 0.90
   3 ?    4.0   0.0     0.017        61      58      77 ..     897    1008 ..     840    1028 .. 0.56
   4 ?    1.2   0.1      0.13   4.5e+02      58      92 ..    1096    1142 ..    1021    1180 .. 0.56
   5 ?   -2.0   0.0       1.2   4.4e+03      59      87 ..    1392    1420 ..    1220    1425 .. 0.60

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.3
     DUF2935  58 v........................rasseleeavakLneealkltreliqFkke 88 
                                            s e ee++  L e++ ++++e+ ++k+ 
  KHJ32369.1 488 KaeedrpstshssttneespkwhdeESSYEREEEIIYLREKIQEYVTEIEKLKSD 542
                 1333333444444444444444444444455555555555555555555555554 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.007
     DUF2935  24 lldpkekdlikeakefkkeFekllaeavelseglv...rasseleeavakLneealkltreliqFkkellekvls 95 
                 +l+ +++dl +e++++ ++Fe+   + ++++++++    a    e+++++L +e  +++  + ++k+e ++++ls
  KHJ32369.1 765 SLKIQNQDLHRELESCMEDFETAVYQKRKIEKTVMnmrEALDAAENEIMNLQDERNNAVITFEAYKEEAQQEILS 839
                 5677899***********************99999776666788999*************************998 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.017
     DUF2935   58 v............................................................................................rass 62  
                                                                                                               + ++
  KHJ32369.1  897 EkeleeanreleqlekslveanekssrltvqlescqgeivflreeqesdkikignleaalktaertsddererfkdlsqrfssersqrealaaKEKK 993 
                  0333333322222222222333333455566666666666666666666666666666666666555555555555555555555555555555566 PP

     DUF2935   63 eleeavakLneealk 77  
                  e+++++++Ln+e  +
  KHJ32369.1  994 ESQQHINQLNRELTS 1008
                  666666666666555 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.13
     DUF2935   58 v............rasseleeavakLneealkltreliqFkkellek 92  
                               ++  ++++++++  + +l+++r++ q  +++ e 
  KHJ32369.1 1096 EarkladildkerQYHRNTKHQFETYQKSSLHAIRNISQQESRVVEL 1142
                  03333334445554444444444444444444444444444444433 PP

  == domain 5  score: -2.0 bits;  conditional E-value: 1.2
     DUF2935   59 rasseleeavakLneealkltreliqFkk 87  
                  + ++   +++ + n+e  +l++e+ ++k+
  KHJ32369.1 1392 MDRTAARQRLDEKNQENQELVQEIERLKS 1420
                  44555555555556666666666655555 PP

>> Rop-like  Rop-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.7    0.0036        13       2      29 ..     528     555 ..     527     557 .. 0.93
   2 ?   -2.2   0.1       1.1   3.9e+03      46      62 ..     838     854 ..     822     858 .. 0.66
   3 ?   -2.0   0.8      0.93   3.3e+03      50      64 .]     898     912 ..     898     912 .. 0.89
   4 ?   10.5   1.0   0.00011       0.4       7      40 ..    1013    1046 ..    1005    1074 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0036
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Rop-like   2 dieeLkkevkKlnskAtqakmdLHDLaE 29 
                 +i+e  +e+ Kl+s A+++  d +DLaE
  KHJ32369.1 528 KIQEYVTEIEKLKSDAASKEKDRRDLAE 555
                 6889999********************9 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHHHH CS
    Rop-like  46 yeafaelaeakaeLkal 62 
                   + +el+ea+ae++ l
  KHJ32369.1 838 LSISRELDEANAEIERL 854
                 45567777777777655 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.93
                 HHHHHHHHHHHHHH- CS
    Rop-like  50 aelaeakaeLkalek 64 
                 +el+ea++eL++lek
  KHJ32369.1 898 KELEEANRELEQLEK 912
                 689********9985 PP

  == domain 4  score: 10.5 bits;  conditional E-value: 0.00011
                  HHHHHHHHHHHHHHHHHHHHHHHHTTTTGGGHHH CS
    Rop-like    7 kkevkKlnskAtqakmdLHDLaEdLPtnyeeipe 40  
                   k+++++  +A+++k +L DL E+L t+  ei  
  KHJ32369.1 1013 AKRLRRKDVEAAEWKQKLVDLEEQLRTALGEIDG 1046
                  5788999999***************999988865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1427 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2337  (0.130347); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                       146  (0.00814323); expected 17.9 (0.001)
Passed Fwd filter:                        87  (0.00485247); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 2.50u 0.45s 00:00:02.95 Elapsed: 00:00:00.72
# Mc/sec: 5989.13
//
Query:       KHJ32370.1  [L=612]
Description: putative pet112 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.1e-94  315.0   0.0    5.9e-94  314.5   0.0    1.2  1  GatB_N     GatB/GatE catalytic domain
    5.7e-13   49.0   0.3    1.2e-12   47.9   0.3    1.5  1  GatB_Yqey  GatB domain


Domain annotation for each model (and alignments):
>> GatB_N  GatB/GatE catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  314.5   0.0   6.6e-98   5.9e-94       2     272 ..      93     389 ..      92     390 .. 0.96

  Alignments for each domain:
  == domain 1  score: 314.5 bits;  conditional E-value: 6.6e-98
                 EEEEEEEEEB--SB-SSSSSBSSSSCESTTSS--TTTTTSTT..--EEHHHHHHHHHHHHHTTEEE-SEE-EEEEE-TCTTCTTSEEEEESSS.SEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      GatB_N   2 viGlEiHaqlktksKlFssasteeegeepnsevsevdlalPGtlPvlnkeavelaikaalalnceiaeeskfdRKnyfypdlpkgyQitqkeeplakeG 100
                 ++G+EiHa l+t++KlFs a + + ++++n++v+ +dl++PG++P ++ke++  ai+aal ln+ i++ skfdRK+yf++d+p+gyQitq++ep ak+G
  KHJ32370.1  93 TVGIEIHALLNTERKLFSPALS-TINQKANTHVAFFDLSVPGSQPIFQKETLIPAIRAALILNSGIQKVSKFDRKHYFHWDQPAGYQITQYYEPYAKNG 190
                 79*****************995.59999*********************************************************************** PP

                 EEEE............TEEEEEEEEEEEE---EEEEEETTEEEEETTSTT-EEEEEEE-STB-SHHHHHHHHHHHHHHHHHHTSB--SGGGTTEEEEEE CS
                 xxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      GatB_N 101 slel............ekkvrierihlEeDaaksvheekeeslvdlnRaGvpLiEivtepdlrspeearavveklrellralgvsdgnmeeGslRcDvN 187
                  ++l            + +v+i++i+lE+D+ak++++ +  +l+d+nR+G+pLiEi+t p +r+p++a+a+v+k++ ll++++++  +me+G lR+D+N
  KHJ32370.1 191 FVTLyahdgiskedgdQIQVGIKQIQLEQDTAKTISKPE-GHLLDYNRVGLPLIEIITLPVIRHPKTAAALVRKIQILLNSVDACVIGMESGGLRADIN 288
                 **********9999999999***************9876.9********************************************************** PP

                 EEECTSE........TTSSS..--EEEEEE-SHHHHHHHHHHHHHHHHHHH.......-EEEEEETTTTEEEEECC----...-EEE-TTS--EE--HH CS
                 xxxxxxx........xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      GatB_N 188 vSvreee........kgeee.gtrvEiKnlnslksiekaieyeierqiell.......qeTrkfdedkgetvslRskeeaedYryfpepdlppleisee 270
                 +Svr+ +        k++++ g +vEiKnl+s+ksie+ai +e +rqi++l       +eTr++   ++et++lR+ke + dYry+p+pdlpp+ i ++
  KHJ32370.1 289 ISVRQLNkidhsskcKDQNKlGRKVEIKNLSSFKSIEDAIIAERDRQISILesgdsiiSETRGWAIGATETKKLRKKEGEIDYRYMPDPDLPPIIIGDD 387
                 ****87557777765456668***************************************************************************999 PP

                 HH CS
                 xx RF
      GatB_N 271 li 272
                 +i
  KHJ32370.1 388 VI 389
                 87 PP

>> GatB_Yqey  GatB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.3   1.4e-16   1.2e-12      13     147 ..     453     602 ..     445     603 .. 0.85

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 1.4e-16
                 HHHHHHHHHTCHHHHHHHHTXXTTCS.........STTHHHHHHHHHHHHTTSSGHHHHHHHHHHHH..HHTXXHHH...HHHHCTXXXXX.XSSXHHH CS
   GatB_Yqey  13 aklaanwllnellgelnkegleieel.........kltpeqlaellkliaegkIskkiakevleell..eegkspee...iieekgLkqis.deeelek 96 
                  kl++nw+l+++++ l++ +l+ +++         +++pe+la ll l++ +kI  k ak  l+ l+  +++k+p++   iie++gL  ++ +e++ ++
  KHJ32370.1 453 GKLCCNWVLHDMAS-LRRDDLNEDNShqlkadgncSIPPEELATLLFLLETKKILRKPAKYALQRLFfcTTEKTPSNicgIIEKEGLWNLKiSEDQYKE 550
                 7999******9864.55555555554445555666******************************9998889999763337******9999989***** PP

                 HHHHHHHTXHHHHHHHTTXXTTSTHHHHHHHHHT.TSSXSXHHHHHHHHHHH CS
   GatB_Yqey  97 lveeviaenpkavedyksgkekalkflvGqvMkk.tkGkadpklvnellkek 147
                     ++a+ +  ++ + +g+e+ +k+l+G++ k+  kG  dpk++++ lk+ 
  KHJ32370.1 551 QARIILAQYEVILKAVLAGNESKIKALLGMMLKNdRKGVLDPKMAEQALKQV 602
                 ********************************98688999*********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (612 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       598  (0.0333538); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4238.78
//
Query:       KHJ32371.1  [L=278]
Description: hypothetical protein EV44_g3660 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-33  115.9   0.1    2.3e-33  115.6   0.1    1.1  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.6   0.1   1.3e-37   2.3e-33      22     221 ..       1     230 [.       1     231 [. 0.87

  Alignments for each domain:
  == domain 1  score: 115.6 bits;  conditional E-value: 1.3e-37
                 HHCTB--...........-------HHHH.................HC.CHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET............... CS
       RVT_1  22 lnkliakrLkdvl..ekllsenqpgfrpgrstldav....edllkalk.kkkkaklllklDlkkaFdsvpleellrkltafkvptklinliksflstrs 113
                 ++k+i + L++++   +ll+e+q+g r++rst +av    e+++ +   kkk+   +++lD+++aFd+v++++l++ l+  ++p +++n iksfl++r+
  KHJ32371.1   1 MEKVITNKLSTAAekYSLLPEEQMGARTKRSTTTAVelltEQIHTIWGgKKKQVASAISLDISGAFDNVSHARLFHNLKVKGIPIWITNFIKSFLEDRT 99 
                 68999999***9988899******************9996555544332455558899***************************************** PP

                 ...........TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHH......HHHHHHHHHHHHHHTT--BEGGG-EE CS
       RVT_1 114 fsvrv.ngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskee......lqelleaveewlkesglkinpeKtkl 205
                 +++ + + +   ++++++g+pqGs lSP+lf +f + ll  l++   +  ++ ++DD++il+ s +        ++l e++ +w++ +g+k++peK +l
  KHJ32371.1 100 TTIALgSFKG-DQIPTNTGIPQGSSLSPILFLFFASTLLPTLSSD--NSSTIGFVDDTTILTWSSSTeencekPENLHEKCISWARLHGVKFAPEKYQL 195
                 *****55555.*********************************7..9************99885555899999************************* PP

                 E........................ESSEEETTEE CS
       RVT_1 206 vlft..................v.kseevkyLGvt 221
                 ++f                      + ++++LG++
  KHJ32371.1 196 IYFSrarkkhnmnasmkiqntsIkPQISLRILGIH 230
                 ***98888888877777765542566667777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2011.75
//
Query:       KHJ32372.1  [L=1392]
Description: putative 5 -3 exoribonuclease 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-98  328.6   6.6    1.1e-97  327.9   6.6    1.3  1  XRN_M       Xrn1 helical domain
    3.8e-96  321.2   0.1    7.9e-96  320.2   0.1    1.6  1  XRN_N       XRN 5'-3' exonuclease N-terminus
    4.2e-72  241.9   0.0    7.8e-72  241.1   0.0    1.5  1  XRN1_D1     Exoribonuclease Xrn1 D1 domain
    5.3e-30  103.5   0.0    1.7e-29  101.8   0.0    2.0  1  XRN1_D2_D3  Exoribonuclease Xrn1 D2/D3 domain
    1.2e-23   83.0   1.1    2.3e-23   82.1   1.1    1.5  1  SH3_12      Xrn1 SH3-like domain
    5.4e-10   39.2   0.0    1.4e-09   37.9   0.0    1.7  1  Xrn1_D3     Exoribonuclease 1 Domain-3


Domain annotation for each model (and alignments):
>> XRN_M  Xrn1 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  327.9   6.6  3.5e-101   1.1e-97       2     345 ..     275     673 ..     274     685 .. 0.85

  Alignments for each domain:
  == domain 1  score: 327.9 bits;  conditional E-value: 3.5e-101
       XRN_M   2 fdleriiDDfvFlcFFvGNDFLPhlPsLeiregaidlllkvYkkelkklggyltdngevkldrveklvslvgkveekifrkrkeredrkekklakeeea 100
                 fdle++iDDf+ ++FFvGNDFLP lP L+i+ega+ l++k+Yk  l+k++gy+ + g+++++r   l++++ +ve + f++  + ++  ++kl +++++
  KHJ32372.1 275 FDLENVIDDFILMAFFVGNDFLPNLPNLHINEGALALMFKIYKIILPKIDGYINEGGFINMERLAILLDELSHVEYRFFESDVADQAWFDSKLMSRRDV 373
                 89***************************************************************************************9999999988 PP

       XRN_M 101 skedaaneeaavaeeklseskvak.........................................................saeaeaeaeaeaeaeaka 142
                   + +  ++ +++  ++ + k  k                                                         s       ++e+e+ +++
  KHJ32372.1 374 MLKGKSLDQVTMTSYQQENWKNIKsfltdksrqqidlpldlaaidksffetlatrinlkwrsvqdedgnrhmqlyrsspseS------DNTEIENLESE 466
                 8877777777666555444333335999*********************************************996544332......33333333332 PP

       XRN_M 143 .ekekrekaekeleese..eeeeeeDkvrL.geeGykeRYYkekfevsseeieqrrevvqkYveGLcWvlrYYyqGvaSWkWfyPyhyaPFaSDlknla 237
                  +++ + + +++  + +  e++++ D +     + +k+ YY++kfe   +++ +  ++ ++Yv+GL Wvl YYy+GvaSW W+y yhy+P +SD+++  
  KHJ32372.1 467 iTSSIKLYDDAKIVDVSvvETKAQMDLLYEeKFRQWKDTYYQSKFEWGLSNNFELVRLCENYVQGLQWVLFYYYRGVASWAWYYQYHYSPMISDVIKGL 565
                 033333333222222220022223332221122469***********999999999***************************************9999 PP

       XRN_M 238 dlkikFekgspfkpleqLmavlPaaskkalPkayqkLmtdpdSpiidlypedfeidlnGkrvaWqgvaklPfidekrLlealakleeeLteeEkkRNtr 336
                 +  ++Fe+g+pf+p+eqLm+vlP +sk+ +P+ y++Lmt+++Spiid+yp+dfe+d+nGk++ W +v+k+PfidekrLl+a+a+ ++ L++eEk RN+ 
  KHJ32372.1 566 NADLNFELGKPFHPFEQLMGVLPDRSKEIVPAVYHDLMTSSKSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLAAMAPRNHLLSNEEKSRNKF 664
                 99***********************************************************************************************98 PP

       XRN_M 337 ksdvlfvsk 345
                 +  + f+  
  KHJ32372.1 665 GVTLQFFYD 673
                 877766655 PP

>> XRN_N  XRN 5'-3' exonuclease N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  320.2   0.1   2.6e-99   7.9e-96       1     242 []       1     227 [.       1     227 [. 0.93

  Alignments for each domain:
  == domain 1  score: 320.2 bits;  conditional E-value: 2.6e-99
                 XXX-HHHHHHHHHSGGGEEE------SSSS.-EEEEEEETHHHHHHHHS-SSS-......--SSHHHHHHHHHHHHHHHHHHH-EEEEEEEE------H CS
       XRN_N   1 mGvpklfrwlserypkivkevieeeeeeek.efdnLYlDmNgiihkcshkedkeekelskkpkteeeifkkifkyidrlvkivrprkllylavDGvaPr 98 
                 mGvpk+frw+seryp +++++i+e++     efd+LYlDmNgiih+c+hk    ++++++ ++tee++f +if+yi++l  +++p++l+++a+DGvaPr
  KHJ32372.1   1 MGVPKFFRWMSERYP-AISQLITENR---IpEFDCLYLDMNGIIHNCTHK----DTDDTSFRMTEEQMFITIFNYIEHLYGKIKPKQLFFMAIDGVAPR 91 
                 9**************.7778874444...33******************9....45567899************************************* PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-BB--------GGGSSTTSHHHHHHHHHHHHHHHHHHHH-GGGGG-EEEEE-TTS-S-HHHHHH CS
       XRN_N  99 aKmnqqRsRRfrsakeakeekeekeelkeelekeekeeeeeeekfdsnvitpGtefmeklsealkafikkklkedpawknlkvilsdaevpGEGEhKim 197
                 aKmnqqR+RRfr+a + + + +++ +        e +e ++e++fdsn+itpGt+fm+kl+++lk+fi+kk+++d +wkn+k+ils++evpGEGEhKim
  KHJ32372.1  92 AKMNQQRARRFRTALDVELAINKAIK--------EGKEIPKEQAFDSNSITPGTAFMHKLTRQLKYFISKKVSDDANWKNVKIILSGHEVPGEGEHKIM 182
                 ****************9999765433........3445578899******************************************************* PP

                 HHHHHHHTSTTS-TT-EEEEE---THHHHHHHHHT-SSEEEEEE- CS
       XRN_N 198 efirkqrskpeydpntrhviyglDaDLillsLathepniliLree 242
                 e+ir  +++p+ydpn rh++yglDaDLi+l+L++h+p++++Lree
  KHJ32372.1 183 EYIRLAKAQPDYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREE 227
                 *******************************************96 PP

>> XRN1_D1  Exoribonuclease Xrn1 D1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.1   0.0   2.6e-75   7.8e-72       1     192 []     714     902 ..     714     902 .. 0.99

  Alignments for each domain:
  == domain 1  score: 241.1 bits;  conditional E-value: 2.6e-75
                 SS-TT---GGGS-TTS--STTS-EEEEEE-----SSSS--SS-EEEEEE--------HHHHHHHHBTSEEEESGGG-EEEEEEEEE-SS-EEEEE-..S CS
     XRN1_D1   1 GLlegaklgaealaGFPsLktlpftaeLefhgvnvFqqeSrneSmvvtiedkeenlkleelakeklgkrvfvgyPfLrEakvvavsdelfkyekellee 99 
                 GL++g+kl ++alaGFPsL+tlp++++L+fhgvn+Fq+eSrneSm++t++d  e++++ e+a  klg++vfvgyP+L+E+kvv+vsde+f+y    +++
  KHJ32372.1 714 GLVDGVKLRDAALAGFPSLSTLPYSSALDFHGVNIFQSESRNESMIITLKD-LESRANIETALMKLGQKVFVGYPYLQEGKVVKVSDEHFDYL--PSND 809
                 9**************************************************.99***************************************..6689 PP

                 SSEEEEEE--THHHHHHHHHHHHHHHHHHHHHH-EEES--S-EEEEEEEEEEEE-TTS-EEEEE-SS-EE...EEGGG-BS--SS--GGGS-B CS
     XRN1_D1 100 kkkkvvsrphsekekkefkkkaerierkyskrlgviigevevlvhveplkGLkrteeGalvKeyeeeeeleteyalqlvveevaneDeRfiek 192
                 +  k ++rph+++e+++f+kka+rie +ys+ lg++ig v++ vhve+l+GL++t+eGa++K+y+  +++ete+a+q++v++v+neD+Rf+e+
  KHJ32372.1 810 GIAKPIQRPHNPREIEDFNKKADRIEYNYSNYLGIVIGPVKSTVHVEMLEGLTKTDEGATIKKYAVIPGMETEFATQVIVHDVINEDQRFLEQ 902
                 99*****************************************************************************************97 PP

>> XRN1_D2_D3  Exoribonuclease Xrn1 D2/D3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.8   0.0   5.7e-33   1.7e-29       1      87 []     906     991 ..     906     991 .. 0.99

  Alignments for each domain:
  == domain 1  score: 101.8 bits;  conditional E-value: 5.7e-33
                 -HHHHS-TT-EEEE-SCTCTTEEEEEEEESSSEEEEEEEBS-SS---SHHHHHHHHHHHHS-EE------EEHHHHHHHHHHHCHXX CS
  XRN1_D2_D3   1 pieeEFPegskvffLGeyaYGrpaevtghsekklsvvlaklksekepefgkkrikeaeksnrYlpsfavakklglsplvLskitSsF 87 
                 pie+EFP g+++ffLGe+ YGrp+e++gh++++++++l+++ + ke++fg+++i++  ++++Y+++fav+++lgl++lvLskitSsF
  KHJ32372.1 906 PIEDEFPPGTRAFFLGEFDYGRPLEIIGHDKDRTEIWLSATVA-KEQDFGHQVIQDYGSKIKYTSAFAVSQMLGLNSLVLSKITSSF 991
                 9*****************************************9.******************************************9 PP

>> SH3_12  Xrn1 SH3-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.1   1.1   7.7e-27   2.3e-23       1      68 []    1148    1218 ..    1148    1218 .. 0.95

  Alignments for each domain:
  == domain 1  score: 82.1 bits;  conditional E-value: 7.7e-27
      SH3_12    1 qqfrLgdrVvyvrdngksVPlGlrGtVVg....rsdtlleVlfDeeflsgtdlggrcskmrgifvpptdlln 68  
                  q+f Lgdr+vyv+d+g+ VP+ +rG+VVg    + + ll+V+fD +f+sgt+lggrc+++rg +vp+++++n
  KHJ32372.1 1148 QSFSLGDRIVYVQDSGR-VPIATRGVVVGisrtSRTALLDVVFDLTFMSGTTLGGRCTPFRGSTVPTSSVIN 1218
                  689*************8.************987556999*******************************98 PP

>> Xrn1_D3  Exoribonuclease 1 Domain-3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.9   0.0   4.6e-13   1.4e-09       1      69 [.    1071    1140 ..    1071    1141 .. 0.96

  Alignments for each domain:
  == domain 1  score: 37.9 bits;  conditional E-value: 4.6e-13
     Xrn1_D3    1 adellkeiaewLKkvka.dlvkVslESdSltkfSiaaiEdyvenYivqevklesKdlagVPrdAvldpst 69  
                  ade++kei+ewLK + + ++ +V l+S+ l    ++aiE+  ++  ++ +    K+l+gVPr A+l ps 
  KHJ32372.1 1071 ADEKIKEITEWLKSIESkNFERVPLDSEQLDPEIVTAIEQAADRMLQTFPGVAYKKLRGVPRYALLKPSD 1140
                  69************9985799***********************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       459  (0.025601); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.83u 0.28s 00:00:01.10 Elapsed: 00:00:00.48
# Mc/sec: 8757.07
//
Query:       KHJ32373.1  [L=725]
Description: putative glutamine-dependent nad(+) synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.9e-35  120.9   0.0    8.2e-35  120.4   0.0    1.2  1  CN_hydrolase  Carbon-nitrogen hydrolase
    1.7e-20   73.1   0.1    6.4e-20   71.3   0.1    1.9  1  NAD_synthase  NAD synthase
  ------ inclusion threshold ------
       0.13   11.6   0.7       0.24   10.8   0.7    1.3  1  DUF5305       Family of unknown function (DUF5305)


Domain annotation for each model (and alignments):
>> CN_hydrolase  Carbon-nitrogen hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.4   0.0   1.4e-38   8.2e-35       2     260 ..       7     282 ..       6     283 .. 0.94

  Alignments for each domain:
  == domain 1  score: 120.4 bits;  conditional E-value: 1.4e-38
                   EEEEEBB-STTHHHHHHHHHHHHHHHHHHTTESEEEEETTTTTBSSSHHHHHHHHB....HSSSHHHHHHHHHHHHHTEEEEEEEEEEEC...CTTE CS
  CN_hydrolase   2 vAvvQlpqkaadleanlqklleliaeAarkgadLivlPElfitgykeeahfleaAe....aglgetlallaalarkngiavviglierel...tngk 91 
                   +A + l+q+a d+e+n +++ e i+ A++kga+L + PEl itgy++ +hfle ++    +   e+la++ +   +++i++ +g + r +   +n++
    KHJ32373.1   7 LATCSLNQWALDFEGNADRIIESIRIAKKKGASLRIGPELEITGYSCQDHFLEGDTylhsW---EMLARIIDHDDCQDIVIDLGAPVRHHnirYNCR 100
                   799**************************************************99996666...********************99998899***** PP

                   EEEEEEEEEEETTSEE...EEEEE-SS--EECTTSCECCGHHTSCS.............-SSS-EEEETTEEEEEEEGGGGGSHHHHHH.HHHTT-S CS
  CN_hydrolase  92 lqayntavlldldgkl...vgkyrKlhLfpgeprpptaverelfep.............gdgipvfdtpvgkiGaaiCyeigfpellra.lalkgae 171
                   + ayn+ +l  + + +    g+yr+ ++f + + +p++ve++++e+             gd  ++++t  ++iGa+ C+e + p +  + ++l+g+e
    KHJ32373.1 101 IIAYNRKILYIKPKLWladDGNYREGRWF-TPWSKPKHVEEYYLERsvreitgqttvpiGD--AILSTFDTCIGAETCEELFTPDNPGIhMGLNGVE 194
                   *****************************.89********************999999999..88899999****************999******* PP

                   EEEEBH.GCCCTCHHHHHHHHHHHHHHHHHHTSEEEEEEBEEEHCETTEEEE--EEEE-TTS-EEEECCSSSTE...EEEEEEEHHHHHHHH CS
  CN_hydrolase 172 ilvnlserapvpksmgppqwellgraralengcfviaanqvggyeqlilwpvghSaiidpdGrilaglgeeeeg...vliaeidladvratr 260
                   i +n s++++++ ++ +   +l+  +   ++g++ +++nq g+   +++ ++ ++  i  +Gr +a   +++ +   v++a++dl++vr++r
    KHJ32373.1 195 IFTN-SSGSHHELRKLKQRINLIL-HCTRAGGIY-LYSNQKGC-DGDGRLYFDGTPGIFINGRAVAMGKQFSLDeveVVTATLDLEEVRSFR 282
                   ****.7788889888888877766.555679***.********.99********************99999999999************987 PP

>> NAD_synthase  NAD synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.3   0.1   1.1e-23   6.4e-20      16     198 ..     356     611 ..     341     619 .. 0.85

  Alignments for each domain:
  == domain 1  score: 71.3 bits;  conditional E-value: 1.1e-23
                   CTTSEEEEEE-SSHHHHHHHHHHHHHH......................................TCGEEEEEE--SSSTTHHHHHHHHHHHHHHTS CS
  NAD_synthase  16 agakgvvlGlSGGvDSslvaalavkal......................................gkenvlalllPssvsseedvedalalaenlgi 74 
                   +g  g  l lSGG+DS  +a ++ ++                                           +++ ++ +++ss+e  + a++la+ +g 
    KHJ32373.1 356 KGIAGYFLPLSGGLDSCSTALITFSMCrivmeavkdqnkqvikdllrivgepedskwrptdareiSGRIFHTCYIGTKNSSHETRQRAKELAHAIGS 452
                   455677788********99998777767777999**************************9998866789999************************ PP

                   EEEE---HHHHHHHHHHHHHHH..............-HHHHHHHHHHHHHHHHHHHHH......HHT....EEEB---BHHHHTTT-S-TTTTT--S CS
  NAD_synthase  75 evktidikpivrafeqelkeak..............edlakgNlkaRiRmailyaian......kln....llvlgTgnksElvvGyfTkyGDgaad 147
                       id++++v+++++ ++  +              e+ a +N++aR+Rm++ y +a+      + n    llvlg gn sE + Gy Tky   +ad
    KHJ32373.1 453 YHLDIDMDSVVSSVTNLFTFVTslalkftvhggtpaENNALQNIQARLRMVLAYLFAQllpqvrQRNnggcLLVLGSGNLSEQLRGYYTKYDNSSAD 549
                   ****************5444444466777888999999999****************7333222111233369************************ PP

                   BETTTTS-HHHHHHHHHHTT....--..HHHHCS--B--S.....STT-BHHHHHSS-HHHH CS
  NAD_synthase 148 lapiaellKtevkeLakeln....vP..ervlkkpPsAdL.....kpgqtDeeeLgikYdel 198
                   ++pi+++ K +    +k+      +P   + +   P+A+L        qtDe+++g++Y+el
    KHJ32373.1 550 INPIGGIDKADLILFVKWAQshfeIPilAQFVSATPTAELepttnNYVQTDEDQMGLTYAEL 611
                   ***********988888777777766437999********77766667***********998 PP

>> DUF5305  Family of unknown function (DUF5305)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.7     4e-05      0.24      24      81 ..     269     327 ..     255     335 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 4e-05
     DUF5305  24 esvsinlseyndrieeieeelglsvgtseltvvlevnvegeidg.esieesktsrlpip 81 
                  +++++l+e++ + ++i ++l++s  +s  +v++e+++++++++ +s e++ +++++i+
  KHJ32373.1 269 VTATLDLEEVRSFRTSISRSLQGSREQSYSRVNAEISLSNNSTKvTSPEIKLSQEIDIK 327
                 5789************************************9999999999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (725 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.32s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 4896.80
//
Query:       KHJ32374.1  [L=599]
Description: putative dna lyase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.5e-14   51.8   0.0    1.1e-13   51.3   0.0    1.2  1  Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
    2.2e-08   34.1   0.2    7.7e-08   32.3   0.2    2.1  1  zf-GRF         GRF zinc finger


Domain annotation for each model (and alignments):
>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   0.0   1.2e-17   1.1e-13      30     233 .]      22     300 ..       2     300 .. 0.84

  Alignments for each domain:
  == domain 1  score: 51.3 bits;  conditional E-value: 1.2e-17
                    TTSEEEEEEEBSCTCHHHHHHHHH..TTCEEEEECCHECSSSTTSSEEEEEECSTEEEEEEEEEEETSSSSGCEEEEEEEEEEEEEEE........ CS
                    xxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........ RF
  Exo_endo_phos  30 daDvlgLQEvdddelsriplllal..ggflgasstsptgggggggnggavlsrfpltslfrrtfiefndlvaalrreplaakleqlni........ 115
                     aD++ LQE++ +  ++++   +   +  + ++s        +g+ g+a++ r  + + +r     +++l  +  ++ +      l+i        
     KHJ32374.1  22 EADIVILQEIKIQRKDLQDDMVLIpgW--DVFFSF---PKHKKGYSGVAIYTRSDFCAPIRAEEGITGILTPPKSSTSFRDLPIELQIggyptsnq 112
                    67*******999987777666666641..333333...3678**************7777776666666666666666666666666688888888 PP

                    .................................CCCHHGHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SSSTSGGGBSCGHHHHHHCTTTH.. CS
                    .................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.. RF
  Exo_endo_phos 116 .................................ashrdhdlvrdlqllalllqvealnadrgapvivaGDfNarpsdddsrvlrtrglalapap.. 176
                                                     as+   ++  +l +l  l+++ ++  + g++v++aGD+N +  + ds  ++++ + +   p  
     KHJ32374.1 113 lsnfsidassldsegrcviiefpafvligtycpASRDCARDEFRLGFLNALDARVRNLVNAGKRVFLAGDLNIVREEIDSIYTEEAMKKNGSLPeg 208
                    88********************************************************************************************99 PP

                    ....................H......................SSCESCETTTTTTTTTTTEB-BEEEEEECHHHCCEEEEEEECCHHEECTSSCS CS
                    ....................x......................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 177 ....................v......................glyllgggptptyvtraggsrlDrilaspalalfrsgvlppplalvrrealtl 230
                                        +                      +   +++ + ++ ++ + gsr+D++l s +++ +   +++ ++       l++
     KHJ32374.1 209 fllcpirrifnqmvlggkviGdrdlgrekpvlldicryfhpsrHNMFTCWDQKTNSRPGNLGSRIDYVLCSEDWKDWFCDSNIQEG-------LMG 297
                    999988888877777666550556666777778888999999*****************************988888888888877.......889 PP

                    SSB CS
                    xxx RF
  Exo_endo_phos 231 SDH 233
                    SDH
     KHJ32374.1 298 SDH 300
                    **9 PP

>> zf-GRF  GRF zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.2   8.6e-12   7.7e-08       1      41 [.     544     594 ..     544     598 .. 0.77

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 8.6e-12
      zf-GRF   1 plCkcgrlavlltvrktgpNkGRkFYkCpkgke..........kqCgFFkW 41 
                 p Ck+g+++  l+ +k g N+GR FY Cp + +            C+ F W
  KHJ32374.1 544 PRCKHGEPCISLVTKKPGINHGRSFYICPRPIGpsgqdekdsiWRCNTFIW 594
                 57***************************8755444445444445666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (599 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 4151.35
//
Query:       KHJ32375.1  [L=781]
Description: putative anaphase-promoting complex protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-30  103.9   4.3    3.4e-30  103.9   4.3    3.0  3  ANAPC5    Anaphase-promoting complex subunit 5
     0.0031   16.9   0.8      0.019   14.4   0.4    2.3  1  TPR_MalT  MalT-like TPR region
  ------ inclusion threshold ------
      0.047   13.4   0.1       0.12   12.0   0.1    1.7  1  RPN7      26S proteasome subunit RPN7
      0.075   13.2   1.6         10    6.5   0.0    4.1  4  TPR_2     Tetratricopeptide repeat
       0.45   11.5   1.9         26    6.0   0.0    4.1  4  TPR_14    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> ANAPC5  Anaphase-promoting complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1       3.7   1.3e+04      17      27 ..     102     112 ..     101     120 .. 0.77
   2 !  103.9   4.3   9.6e-34   3.4e-30       1      92 [.     281     369 ..     281     371 .. 0.98
   3 ?    0.1   0.0      0.24   8.5e+02      49      76 ..     575     606 ..     533     621 .. 0.61

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 3.7
      ANAPC5  17 aldsLhryFDy 27 
                 +ld+Lh  F +
  KHJ32375.1 102 SLDALHDFFSH 112
                 78999998855 PP

  == domain 2  score: 103.9 bits;  conditional E-value: 9.6e-34
      ANAPC5   1 hllsylnalrakdYqqaldsLhryFDyvlsqnessqkksyqyalLnlaslhadfghneeAvkaleeairlArenkDkscLalalawlarllk 92 
                 h+  +l+++r+ dY++++ds hryFDy+++++++s   +yqyal+nla+l+adf + +eA +a+ e++++ArenkD++cL++al+w++++ k
  KHJ32375.1 281 HYFIFLESWRSGDYTTSFDSIHRYFDYTMQNRDRS---FYQYALMNLAVLQADFCCFDEAAAAMLETVSIARENKDMACLNFALNWMYHFGK 369
                 8899*******************************...****************************************************87 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.24
      ANAPC5  49 slhadf....ghneeAvkaleeairlArenkD 76 
                 +l+ df    +++++A+  +ee  +  +e++D
  KHJ32375.1 575 ILQVDFlirqSDYNQALLKIEEILSPFKERND 606
                 33333333335666666666666666666665 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.4   5.3e-06     0.019     210     308 ..     497     599 ..     476     609 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5.3e-06
    TPR_MalT 210 rlwlaqgdlaaaerwleaa....elpsdddnhflelelrnlarvllalgrydeAlellerLlkaaeelgrvrslieiliLqalalqaqgreeeAlaaLe 304
                  l++ +g+ ++a+++le+      ++ +++ h l ++ +      l+ ++ d+A++ll++Ll +  e++ v+   ei iLq   l +q +  +Al ++e
  KHJ32375.1 497 FLLVDKGHYDKALELLESLdsdsLRSWKAHHHWLMCKGIIQLKRALHHDNLDSASQLLDQLLHSYDEFKDVDLSPEISILQVDFLIRQSDYNQALLKIE 595
                 3456789*******9999865555666777888888998888888999999************************************************ PP

    TPR_MalT 305 qALe 308
                 ++L+
  KHJ32375.1 596 EILS 599
                 9996 PP

>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   3.4e-05      0.12      32     156 ..     485     615 ..     473     621 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.4e-05
                 HHHHHHHHHHHHHHHHHCT-HHHHHHHHHTCCCC--...SHHHHHHHHHHHHHH..HHHTT-HHHHHHHHHHHHCSSS---.HHHHHHHHHHHHHHHHH CS
        RPN7  32 keeirrakldlaehYlkigdleeAlkaysrireyct...slkhkidmllnlirv..aiffndwdlvskylekakellekggdwerknrlkvyeGlalla 125
                  e++ r   ++a   ++ g++++Al++++ +  ++    ++ h+  m+  +i++  a+   + d++s+ l+++  ++++ +d++    +++ ++  l++
  KHJ32375.1 485 FEDVLRFTSRIAFLLVDKGHYDKALELLESLDSDSLrswKAHHHWLMCKGIIQLkrALHHDNLDSASQLLDQLLHSYDEFKDVDLSPEISILQVDFLIR 583
                 56666777777777788899999999999965544311145678889999999944678889************************************* PP

                 TT-HHHHHHHHCTS-GGGT..TTT--HHHHHH CS
        RPN7 126 irkfkeAaellldilstfts.kellsyedlav 156
                 + ++++A  ++ +ils f++ + + +  +l v
  KHJ32375.1 584 QSDYNQALLKIEEILSPFKErNDIYTRTKLLV 615
                 ***************99988766666666555 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1     0.052   1.9e+02       2      33 ..     319     350 ..     318     351 .. 0.87
   2 ?    6.5   0.0    0.0029        10       6      25 ..     494     513 ..     492     515 .. 0.89
   3 ?   -1.9   0.0       1.5   5.2e+03      12      28 ..     582     598 ..     581     599 .. 0.75
   4 ?   -1.4   0.0      0.99   3.5e+03      12      30 ..     754     772 ..     748     774 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.052
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPn 33 
                 +al+nl+ + +    ++eA++a+ + ++++ +
  KHJ32375.1 319 YALMNLAVLQADFCCFDEAAAAMLETVSIARE 350
                 58999*****************9998888766 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0029
       TPR_2   6 nlGlayyklgdyeeAleafe 25 
                 +++ ++  +g+y++Ale++e
  KHJ32375.1 494 RIAFLLVDKGHYDKALELLE 513
                 68899999*********987 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.5
       TPR_2  12 yklgdyeeAleafekAl 28 
                 +++ dy++Al   e+ l
  KHJ32375.1 582 IRQSDYNQALLKIEEIL 598
                 57889999998887765 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 0.99
       TPR_2  12 yklgdyeeAleafekAlel 30 
                   +g+  +A+++ +  lel
  KHJ32375.1 754 KVMGETSKAIKFANNYLEL 772
                 5679999999999988887 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0    0.0072        26       7      41 ..     495     529 ..     490     531 .. 0.85
   2 ?   -2.5   0.0       3.9   1.4e+04      13      28 ..     543     558 ..     538     560 .. 0.80
   3 ?    0.8   0.3      0.34   1.2e+03       8      42 ..     618     655 ..     612     657 .. 0.69
   4 ?   -0.8   0.0       1.1   3.8e+03       3      29 ..     745     771 ..     744     773 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0072
      TPR_14   7 laeallalGdpdeAiallrralalaPddaeawlll 41 
                 +a +l   G +d+A++ll+ + ++   ++ a+ ++
  KHJ32375.1 495 IAFLLVDKGHYDKALELLESLDSDSLRSWKAHHHW 529
                 67788999************999998888888765 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 3.9
      TPR_14  13 alGdpdeAiallrral 28 
                 + +++d A +ll+++l
  KHJ32375.1 543 HHDNLDSASQLLDQLL 558
                 5578999999999876 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.34
      TPR_14   8 aeallalGdpdeAiallrralalaPddae...awllla 42 
                 a +++ +G+p++   ++ ra + a+  +    +wl++a
  KHJ32375.1 618 ALLFEKAGRPQKGFSVALRAASSAWRARLmpiLWLAMA 655
                 56788999999999988888775655432233777777 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 1.1
      TPR_14   3 allalaeallalGdpdeAiallrrala 29 
                 ++++la++    G++ +Ai+ ++ +l+
  KHJ32375.1 745 MTAKLASINKVMGETSKAIKFANNYLE 771
                 567889999999********9998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (781 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       616  (0.0343577); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.26s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 5326.05
//
Query:       KHJ32376.1  [L=310]
Description: putative methyltransferase type 11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-11   45.0   0.0    1.6e-11   44.3   0.0    1.3  1  Methyltransf_23  Methyltransferase domain
    5.3e-07   30.3   0.0    2.1e-06   28.4   0.0    1.9  1  Methyltransf_25  Methyltransferase domain
      1e-05   25.4   0.0      0.034   14.0   0.0    2.2  2  Methyltransf_31  Methyltransferase domain
    0.00011   22.7   0.0    0.00027   21.5   0.0    1.6  1  Methyltransf_11  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   0.0   3.6e-15   1.6e-11      25     163 ..      71     224 ..      44     226 .. 0.73

  Alignments for each domain:
  == domain 1  score: 44.3 bits;  conditional E-value: 3.6e-15
  Methyltransf_23  25 rvLdiGcGtGillevlrengf....svtgvDlspeaveiaekakkaqkdqfdeqeaaepqg............kfdlIvlrevlehvpdppell 102
                       +Ld G+GtGi++ +++++       v+g Dl   + + +      ++  +      + qg            ++dlI+ r++ + v d+  + 
       KHJ32376.1  71 MILDWGTGTGIWAIEMADRYLpanaRVYGLDLAWTQPPNI------PFNLT------FLQGdielpwhsmgpdRWDLIHIRMLNGGVSDWKGVY 152
                      79**************7764334559******76555543......33333......3333333333444477********************* PP

  Methyltransf_23 103 rqiatllkpg.Gylllseplasl.......kedrllldw.lylvpag.rhi.sffsarslkelleeaGlevv 163
                       +++++lkpg G+l+++e++          ++++++++w +++ +a+ +++ s+   +  + +l ++G++++
       KHJ32376.1 153 GNVFRHLKPGhGWLEHTEIDLTPrcddgtlPANSAIQYWtRMICEASeEVGrSLSYNSGTGSILAQYGFRDI 224
                      ******************743225688998899999999778877775333455555788999999999876 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.0   4.6e-10   2.1e-06       1      96 [.      72     162 ..      72     162 .. 0.83

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 4.6e-10
                      EEEET-TTSHHHHHHHCTS.T.SSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCG.BS.SSTTTEEEEEEESTGGGSSHHHHHHHHHHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrl.g.kakvtgvDiseemleaareraeeeglnvefvqgdaed.lp.fedgsfDlvvssgalhhlsdedlekalkeia 90 
                      +Ld G+GtG +++++a+r+ + +a+v+g+D++ ++  ++        +n++f+qgd+e  ++    ++ Dl++++ +l+    +d++ ++ +++
       KHJ32376.1  72 ILDWGTGTGIWAIEMADRYlPaNARVYGLDLAWTQPPNIP-------FNLTFLQGDIELpWHsMGPDRWDLIHIR-MLNG-GVSDWKGVYGNVF 156
                      8*****************99569********988876543.......478*******7643336778*******6.4444.5569********* PP

                      HHEEEE CS
  Methyltransf_25  91 rvLkpg 96 
                      r+Lkpg
       KHJ32376.1 157 RHLKPG 162
                      *****8 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   7.5e-06     0.034       7      36 ..      72     102 ..      67     105 .. 0.88
   2 !    9.3   0.0    0.0002      0.92      55     104 ..     113     162 ..     109     202 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 7.5e-06
  Methyltransf_31   7 vlDlGCGtGeltfelae.elgpkaevvGiDi 36 
                      +lD G+GtG  ++e+a+  l  +a+v+G+D 
       KHJ32376.1  72 ILDWGTGTGIWAIEMADrYLPANARVYGLDL 102
                      8****************55556********5 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0002
  Methyltransf_31  55 nveFeqgdieelekl.ledekfDlilsnevlnaladpdkileeiervlkpg 104
                      n++F qgdie  + + + +++ Dli+ + +   ++d + ++++++r lkpg
       KHJ32376.1 113 NLTFLQGDIEL-PWHsMGPDRWDLIHIRMLNGGVSDWKGVYGNVFRHLKPG 162
                      89*******97.6455788********877799****************98 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0     6e-08   0.00027       1      91 [.      73     162 ..      73     166 .. 0.86

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 6e-08
                      EEET-TTSHHHHHHHHTT....SEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCCTS...S-TT-EEEEEEES-CCC-CCHHHHHHHHHHH CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg....arvvgvDlskemlklakekaseeglkvefvvadaeklp...fednsfDlvvssevlhhvedpekalkeiaRv 87 
                      Ld G+GtG+ a ++a+r+    arv+g+Dl+ ++        ++ +++++f+++d+e lp   +  +  Dl+ +++    v d++ +  ++ R 
       KHJ32376.1  73 LDWGTGTGIWAIEMADRYlpanARVYGLDLAWTQP-------PNIPFNLTFLQGDIE-LPwhsMGPDRWDLIHIRMLNGGVSDWKGVYGNVFRH 158
                      899************88889999999999755554.......5555589********.663336668*************************** PP

                      EEEE CS
  Methyltransf_11  88 Lkpg 91 
                      Lkpg
       KHJ32376.1 159 LKPG 162
                      ***8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       345  (0.0192426); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2225.71
//
Query:       KHJ32377.1  [L=254]
Description: putative stress response regulator hfs transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.9e-24   85.1   0.6    7.8e-24   84.1   0.6    1.5  1  HSF_DNA-bind  HSF-type DNA-binding
  ------ inclusion threshold ------
      0.099   12.9   0.2       0.13   12.5   0.2    1.2  1  THOC7         Tho complex subunit 7
       0.11   12.3   0.1       0.23   11.2   0.1    1.5  1  Sda           Sporulation inhibitor A


Domain annotation for each model (and alignments):
>> HSF_DNA-bind  HSF-type DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.1   0.6   1.3e-27   7.8e-24      11      96 .]       4      95 ..       1      95 [. 0.87

  Alignments for each domain:
  == domain 1  score: 84.1 bits;  conditional E-value: 1.3e-27
                  T...TTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSB...TTB--TTSEEEEESS--XXXXXXXXXXXXX CS
  HSF_DNA-bind 11 d...eelisWsedgksfvvkdkeefakevlpkyfkhsnfssFvrqLnlYgFrkvkrkee...kkkkkskvweFshenFkrgkpelLkkikrk 96
                  +   +e+++W e g++fv+ d+  f+++vl+kyfkhsnfssFvrqLn Y+F+kv +k        ++ + + F+h+ F++++++lL  i+rk
    KHJ32377.1  4 NsadREIVHWVEGGEAFVILDQTLFEQRVLHKYFKHSNFSSFVRQLNKYDFHKVPQKGGenyPFPNHPNASIFTHSIFRENQTDLLPYIQRK 95
                  334489***********************************************886554666445666788*******************97 PP

>> THOC7  Tho complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   2.2e-05      0.13       9      99 ..      33     169 ..      25     172 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.2e-05
       THOC7   9 lnv..eerplkrltkrllklltsla.............................................esteeeleqlkedllldfaafelsierlq 60 
                 l+   +   ++  +++l+k+   ++                                             +s++e+++ l+e + l + ++e+s +rl 
  KHJ32377.1  33 LHKyfKHSNFSSFVRQLNKYDFHKVpqkggenypfpnhpnasifthsifrenqtdllpyiqrkqpgprrtQSNSEDWALLQELISLGL-QLEISQARLY 130
                 5555544555555555555444444666666666666666777777777777777777777777888887888888888888888875.89******** PP

       THOC7  61 llakanerereryeaekeeieseieavreeieelkaqLe 99 
                  l+ka  +  +ry+++ke++++  e+vr++ + ++  Le
  KHJ32377.1 131 QLSKAFIELLARYTELKEKVLKLQESVRTQGQMMQRLLE 169
                 ****************************99877777666 PP

>> Sda  Sporulation inhibitor A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   3.9e-05      0.23      15      31 ..     126     142 ..     124     157 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.9e-05
         Sda  15 kAlelnLdpDFIeLiee 31 
                 +A+ ++L++ FIeL+++
  KHJ32377.1 126 QARLYQLSKAFIELLAR 142
                 89*************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       909  (0.0507); expected 358.6 (0.02)
Passed bias filter:                      707  (0.0394333); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 1955.78
//
Query:       KHJ32378.1  [L=302]
Description: hypothetical protein EV44_g3605 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-35  123.1   0.0    1.7e-35  122.8   0.0    1.1  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.8   0.0   9.3e-40   1.7e-35       2     234 ..      13     242 ..      12     251 .. 0.87

  Alignments for each domain:
  == domain 1  score: 122.8 bits;  conditional E-value: 9.3e-40
       RVT_2   2 tyrlvslPkdrkaigsrWvftkkkddl.kevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaaeeelvvhqldvdsafLnaeldeevyvkq 99 
                 t++ +      ++i+ +Wv+t k+++     k+kar+ ++G  q       e++a  + l++ rLl+al a  +l   q d   af n+ lde+vy+ +
  KHJ32378.1  13 TFEQIRQTDSMHPIPLKWVYTYKIEKSgYLIKFKARICVHGDLQPKTD--GETYASTLALQVFRLLMALVALFDLETIQADAVKAFCNSPLDEDVYLNN 109
                 777788888999************9987899**********9996543..489999999**************************************** PP

       RVT_2 100 PpGfeidreeekvykLnkslyGlkqapllWnekidkvLkklgferseaesGlyvrgtgegklivalyvddlliagsd...ikiledvkkelakkfklkd 195
                 PpGf+ +   e +  L ++lyGl+++p lW++  + +L ++g+  ++++  +++ +   + +++  +vddl++a +    +k l+ + k+l++k++l+ 
  KHJ32378.1 110 PPGFNKN---EFILCLLRGLYGLRKSPKLWFKLFSGTLSDIGLYSIPGQPCIFTEY---QGIVIFFFVDDLVVAFPAdkrSKALNYL-KKLTQKYELRI 201
                 ****988...99999*****************************************...459***********86540115555555.579******** PP

       RVT_2 196 lgkvskfLGieia..qeaggiklsladyiakvvkkfeltda 234
                 lgk++ f+G++i+  q++ ++ ls+++ i+k+  +    ++
  KHJ32378.1 202 LGKLEWFVGVKITryQSNKKFFLSQEANIEKICCEYSCDQS 242
                 ***********9733699999***********988776554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       457  (0.0254894); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.20s 00:00:00.62 Elapsed: 00:00:00.36
# Mc/sec: 2510.66
//
Query:       KHJ32379.1  [L=621]
Description: hypothetical protein EV44_g1957 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (621 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1112  (0.0620224); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 4410.26
//
Query:       KHJ32380.1  [L=512]
Description: putative wd40 repeat-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-18   66.8  12.6      0.013   16.3   0.2    8.0  8  WD40          WD domain, G-beta repeat
    3.5e-08   33.6   0.0      0.098   13.0   0.0    4.6  4  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
     0.0017   17.4   0.7       0.86    8.5   0.0    3.5  5  Ge1_WD40      WD40 region of Ge1, enhancer of mRNA-decapping 
     0.0019   16.8   0.1      0.021   13.4   0.2    2.1  2  Cytochrom_D1  Cytochrome D1 heme domain
     0.0038   16.6   0.4       0.28   10.5   0.0    2.9  3  Nbas_N        Neuroblastoma-amplified sequence, N terminal
     0.0068   16.5   0.0      0.014   15.4   0.0    1.5  1  DUF4082       Domain of unknown function (DUF4082)


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1      0.15   4.3e+02      10      29 ..      82     103 ..      75     109 .. 0.70
   2 !   13.7   0.0     3e-05     0.091       2      35 ..     145     180 ..     144     182 .. 0.91
   3 ?   -0.6   0.0      0.98   2.9e+03      16      36 ..     202     228 ..     188     229 .. 0.57
   4 !   16.3   0.2   4.4e-06     0.013      17      38 .]     255     278 ..     241     278 .. 0.84
   5 !   13.7   0.0     3e-05     0.089      14      36 ..     313     335 ..     305     337 .. 0.91
   6 !    9.0   0.0   0.00089       2.7       7      38 .]     379     412 ..     366     412 .. 0.77
   7 !    8.9   0.0     0.001         3      21      38 .]     444     461 ..     419     461 .. 0.72
   8 ?    2.8   0.1      0.08   2.4e+02       8      32 ..     475     504 ..     470     506 .. 0.72

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.15
                 S.SSEEEEEEETTSSEE.EEEE CS
        WD40  10 H.ssvtslafspdgawl.asGs 29 
                 H +s+ ++a +p  + l a+G+
  KHJ32380.1  82 HnDSIFCIAQHPLYPNLiATGG 103
                 8566****98888888625774 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 3e-05
                 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEE CS
        WD40   2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvr 35 
                 ++l  l+GH +s+++la + p g+ l+sG+ Dg++r
  KHJ32380.1 145 KPLFRLEGHtDSISALAfTLPKGKTLFSGGLDGKLR 180
                 678889***888*********************998 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.98
                 EEEETTSSEEEE............E.ETTSEEEE CS
        WD40  16 lafspdgawlas............G.sdDgtvri 36 
                 +      +w+++            G s Dg+v +
  KHJ32380.1 202 I------NWILAcpneshpdivalGaS-DGSVWV 228
                 5......56544344444444444525.999876 PP

  == domain 4  score: 16.3 bits;  conditional E-value: 4.4e-06
                 E..EETTSSEEEEEETTSEEEEEE CS
        WD40  17 a..fspdgawlasGsdDgtvriWd 38 
                 a  +s+dg++la+ s+Dg++++Wd
  KHJ32380.1 255 AgnWSSDGKLLATVSEDGSLYVWD 278
                 244********************9 PP

  == domain 5  score: 13.7 bits;  conditional E-value: 3e-05
                 EEEEEETTSSEEEEEETTSEEEE CS
        WD40  14 tslafspdgawlasGsdDgtvri 36 
                  s+a spdg++la+G+  g+++i
  KHJ32380.1 313 FSVAISPDGTFLAAGGAGGSIKI 335
                 5899************9****98 PP

  == domain 6  score: 9.0 bits;  conditional E-value: 0.00089
                 EESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 
                 ++++ +++  lafs+  ++l a+Gs Dg++ i+d
  KHJ32380.1 379 IKAQtDGIETLAFSSLPTMLlAAGSVDGSIAIFD 412
                 4566455999999999999626899*****9998 PP

  == domain 7  score: 8.9 bits;  conditional E-value: 0.001
                 TSSEEEEEETTSEEEEEE CS
        WD40  21 dgawlasGsdDgtvriWd 38 
                 +g +l+s+++Dg vr Wd
  KHJ32380.1 444 EGCLLTSCGMDGVVRRWD 461
                 4445889999*******8 PP

  == domain 8  score: 2.8 bits;  conditional E-value: 0.08
                 ESS.SS.....EEEEEEETTSSEEEEEETTS CS
        WD40   8 tGH.ss.....vtslafspdgawlasGsdDg 32 
                 +GH ++     + ++ ++ +g+ +++++dDg
  KHJ32380.1 475 KGHrGHgegggILGF-VQGNGSRIVTAGDDG 504
                 555433445789888.899999999999898 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.012        35      23      70 ..     141     187 ..     130     207 .. 0.77
   2 !   13.0   0.0   3.3e-05     0.098       7      67 ..     214     279 ..     208     290 .. 0.84
   3 !    5.6   0.0    0.0065        20      43      67 ..     314     338 ..     296     345 .. 0.87
   4 ?    4.0   0.0     0.021        63      37      76 ..     382     422 ..     364     440 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.012
  ANAPC4_WD40  23 RlngqrvwtleedkedsevrsLaWk.pdgklLavaysdgevrlldaesg 70 
                  R + + ++ l  +++  ++++La+  p+gk L  +  dg++r + a++ 
   KHJ32380.1 141 RQSIKPLFRL--EGHTDSISALAFTlPKGKTLFSGGLDGKLRAYTANKH 187
                  6677777777..788999******768***************9998754 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 3.3e-05
  ANAPC4_WD40   7 mDLiAlatedgellvfRlng.......qrvwtleedkedsevrsLaWkpdgklLavaysdgevrllda 67 
                   D++Al+ +dg+++v+ ++        q + +     + ++ ++ +W+ dgklLa + +dg++ + d+
   KHJ32380.1 214 PDIVALGASDGSVWVYFVDSeskdmplQIIQSY--FLHTGSCTAGNWSSDGKLLATVSEDGSLYVWDV 279
                  599*************99987777775555555..6788999999****************9998886 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.0065
  ANAPC4_WD40  43 sLaWkpdgklLavaysdgevrllda 67 
                  s+a +pdg++La + + g++++++ 
   KHJ32380.1 314 SVAISPDGTFLAAGGAGGSIKIVSL 338
                  67889*****************985 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.021
  ANAPC4_WD40  37 edsevrsLaWkpdgk.lLavaysdgevrlldaesgkvvhsl 76 
                  +   ++ La++   + lLa +  dg++ ++d+ ++   + l
   KHJ32380.1 382 QTDGIETLAFSSLPTmLLAAGSVDGSIAIFDSAHKFNTRRL 422
                  55567777777655416789999*******98765444333 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       1.7     5e+03     181     215 ..     147     183 ..     141     187 .. 0.74
   2 !    8.5   0.0   0.00029      0.86     187     218 ..     250     281 ..     200     290 .. 0.86
   3 !    3.9   0.0     0.007        21     190     213 ..     312     335 ..     296     346 .. 0.86
   4 ?    0.5   0.1     0.077   2.3e+02     168     216 ..     363     413 ..     354     449 .. 0.66
   5 ?   -1.9   0.0      0.42   1.3e+03     196     233 ..     442     477 ..     398     480 .. 0.56

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 1.7
    Ge1_WD40 181 llkieehs.liveaafs.pdGtalatasedGevkffq 215
                 l+++e h+  i+  af+ p G +l     dG+++ + 
  KHJ32380.1 147 LFRLEGHTdSISALAFTlPKGKTLFSGGLDGKLRAYT 183
                 5677777656777666558999999999999999886 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00029
    Ge1_WD40 187 hsliveaafspdGtalatasedGevkffqvyl 218
                 +   + + +s+dG  lat sedG +  + v+ 
  KHJ32380.1 250 TGSCTAGNWSSDGKLLATVSEDGSLYVWDVFG 281
                 34678899********************9985 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.007
    Ge1_WD40 190 iveaafspdGtalatasedGevkf 213
                 + + a+spdGt la+  + G +k 
  KHJ32380.1 312 LFSVAISPDGTFLAAGGAGGSIKI 335
                 567799**************9996 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.077
    Ge1_WD40 168 gsgelsveeieegllkieehs.liveaafspdGta.latasedGevkffqv 216
                 +s ++s  ++ + l  i+ ++  i + afs+  t  la+ s dG +  f  
  KHJ32380.1 363 NSNNVSIGHAGKILADIKAQTdGIETLAFSSLPTMlLAAGSVDGSIAIFDS 413
                 555556666666666777776578888999988872578899999998874 PP

  == domain 5  score: -1.9 bits;  conditional E-value: 0.42
    Ge1_WD40 196 spdGtalatasedGevkffqvyledeeeprCLheWkPh 233
                 + +G  l  + +dG+v+ +     + +    + eWk h
  KHJ32380.1 442 TNEGCLLTSCGMDGVVRRWDT--RGGSGIGLIQEWKGH 477
                 234555666667888887753..344444455555555 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.2   6.9e-06     0.021      17      94 ..     228     310 ..     216     318 .. 0.83
   2 ?    0.9   0.0     0.042   1.3e+02     292     325 ..     405     440 ..     369     463 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 6.9e-06
                   EEEEETTT-SEEEEEE-STTEEEEEE....-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEEEEEEE-.-TTSEEEEE CS
  Cytochrom_D1  17 valldgdskeilavletgyalHisrv....fasdgRyvyvigRDgkvtliDLwakeivaevkiGlnarsvavS.qddryvivg 94 
                   v  +d++sk+   ++   y lH++       +sdg+++ +++ Dg + + D++     a+v++ + a  v  S  d r+++ g
    KHJ32380.1 228 VYFVDSESKDMPLQIIQSYFLHTGSCtagnWSSDGKLLATVSEDGSLYVWDVFGDSAAARVIQVGTAYVVGLSaLDQRFAVDG 310
                   457999999988888888999988752222589***********************999999999999999997899998876 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.042
                   HT-EEEEETTBT-EEE-HHHHHT--..EEEEEE-TT CS
  Cytochrom_D1 292 ndsvaviDkktlekvltlaesaglk..vvhvEfnkd 325
                   ++s+a++D+++ + + +l ++a  +  vv+vEf ++
    KHJ32380.1 405 DGSIAIFDSAHKFNTRRLIKQAHEEysVVKVEFVSN 440
                   6899********999999999987788*****9755 PP

>> Nbas_N  Neuroblastoma-amplified sequence, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       0.6   1.8e+03     136     172 ..      72     109 ..      62     112 .. 0.68
   2 ?    2.6   0.0     0.023        69     238     258 ..     259     279 ..     253     290 .. 0.76
   3 !   10.5   0.0   9.3e-05      0.28     228     262 ..     308     342 ..     281     349 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.6
      Nbas_N 136 eshsfsfsshyshgitaaiyhpahrlll.vggcesada 172
                 ++ s ++   +++ i ++  hp +  l+  gg e +d+
  KHJ32380.1  72 QNDSVAYFDLHNDSIFCIAQHPLYPNLIaTGGSEGDDD 109
                 45677777778889999999999865551677777654 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.023
      Nbas_N 238 spdgtllavihfsgklsiwdi 258
                 s dg lla++   g+l +wd+
  KHJ32380.1 259 SSDGKLLATVSEDGSLYVWDV 279
                 677888888888888888876 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 9.3e-05
      Nbas_N 228 ekdgvfkmslspdgtllavihfsgklsiwdipslk 262
                  + g+f +++spdgt la+    g++ i ++p l 
  KHJ32380.1 308 VDGGLFSVAISPDGTFLAAGGAGGSIKIVSLPKLS 342
                 5679**************************99886 PP

>> DUF4082  Domain of unknown function (DUF4082)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   4.8e-06     0.014      41     110 ..     250     319 ..     241     335 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4.8e-06
     DUF4082  41 tgthtgslWsatgtlLasatftnetasGwqtvtlsspva.vtagttYvvsyhapsgryaatanyFaagvts 110
                 tg+ t+  Ws++g+lLa+++  ++    w  +  s++ + ++ gt Yvv  +a ++r+a++ + F+ +++ 
  KHJ32380.1 250 TGSCTAGNWSSDGKLLATVSEDGS-LYVWDVFGDSAAARvIQVGTAYVVGLSALDQRFAVDGGLFSVAISP 319
                 88899999**********765555.88899886665554279***********************665543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3606.23
//
Query:       KHJ32381.1  [L=705]
Description: hypothetical protein EV44_g3734 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (705 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       812  (0.0452898); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4950.67
//
Query:       KHJ32382.1  [L=413]
Description: putative guanyl-specific ribonuclease f1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       464  (0.0258799); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2970.22
//
Query:       KHJ32383.1  [L=101]
Description: putative plasma membrane proteolipid 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-17   62.2  10.8    4.7e-17   61.9  10.8    1.1  1  Pmp3      Proteolipid membrane potential modulator
  ------ inclusion threshold ------
      0.042   14.1   0.2      0.053   13.8   0.2    1.2  1  PRCH      Photosynthetic reaction centre, H-chain N-terminal 


Domain annotation for each model (and alignments):
>> Pmp3  Proteolipid membrane potential modulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.9  10.8   5.2e-21   4.7e-17       2      47 ..       7      52 ..       6      54 .. 0.97

  Alignments for each domain:
  == domain 1  score: 61.9 bits;  conditional E-value: 5.2e-21
        Pmp3  2 illillaiilPPlaValksGcsadllinilLtllgylPgviHAfyi 47
                ++li++ +i+PP++V++  Gc+ +ll+ni+Ltllg++Pg+iHAfy+
  KHJ32383.1  7 LILIIVTLIFPPIGVLIVDGCGFQLLLNIILTLLGFFPGLIHAFYL 52
                79*******************************************8 PP

>> PRCH  Photosynthetic reaction centre, H-chain N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.2   5.9e-06     0.053      18      40 ..      48      70 ..      35      83 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 5.9e-06
                HHHHHHHHHHHHHHTTSSS-S-B CS
        PRCH 18 wiFfagLifYlrrEdkREGYPle 40
                  F++  ++Y +rE +R GYP  
  KHJ32383.1 48 HAFYLEFVYYDQREKHRVGYPRA 70
                57999****************65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       549  (0.0306208); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.43
# Mc/sec: 709.83
//
Query:       KHJ32384.1  [L=78]
Description: hypothetical protein EV44_g3433 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       270  (0.0150594); expected 358.6 (0.02)
Passed bias filter:                      207  (0.0115455); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.27s 00:00:00.63 Elapsed: 00:00:00.43
# Mc/sec: 540.14
//
Query:       KHJ32385.1  [L=110]
Description: hypothetical protein EV44_g4230 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 812.19
//
Query:       KHJ32386.1  [L=448]
Description: hypothetical protein EV44_g4867 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.5e-41  139.8   0.2    2.5e-34  118.9   0.0    2.3  2  Pribosyl_synth  Phosphoribosyl synthetase-associated domain
    6.6e-31  106.7   0.0    1.9e-30  105.2   0.0    1.8  1  Pribosyltran_N  N-terminal domain of ribose phosphate pyropho
      2e-12   46.9   0.1    3.4e-12   46.2   0.1    1.3  1  Pribosyltran    Phosphoribosyl transferase domain
  ------ inclusion threshold ------
       0.03   13.7   0.1      0.051   13.0   0.1    1.3  1  UPRTase         Uracil phosphoribosyltransferase


Domain annotation for each model (and alignments):
>> Pribosyl_synth  Phosphoribosyl synthetase-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   1.4e-07   0.00062       2      41 ..     290     329 ..     289     335 .. 0.90
   2 !  118.9   0.0   5.7e-38   2.5e-34      68     184 .]     330     446 ..     325     446 .. 0.97

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 1.4e-07
                     GGGEEEEESSGGGHHHHHHHHHHTT-EEEEE--------- CS
  Pribosyl_synth   2 yrnavivakspgsakkatsyaerlrlglavihGeqkeaea 41 
                     y+ aviv+ + g ak+ats a+ l++  a+ih e++ +  
      KHJ32386.1 290 YQKAVIVSPDAGGAKRATSIADDLNMEFALIHKERRPTRI 329
                     899*******************************987655 PP

  == domain 2  score: 118.9 bits;  conditional E-value: 5.7e-38
                     ---------EES--TTSEEEEEEEEE-S-HHHHHHHHHHHHTT--EEEEEEEEE---TTHHHHHHHSS--EEEEESSS--HHHHHT-TTEEEE-- CS
  Pribosyl_synth  68 lakekppltvvGdvgGriaiivddliddvesfvaaaevlkerGaykiyvlathGllssdaprlleesaidevvvtntipheiqklrcskiktvdi 162
                     + ++   + +vGdv+ r+ai+vddl d  +++  aa++lk  Ga ++y+l thG++s da  ++++sa+d+v+vt ++p++ ++ +c k++ ++i
      KHJ32386.1 330 TERQNATMMLVGDVTNRLAILVDDLADTSNTITRAAKLLKREGATQVYALLTHGIFSGDAIPRINASALDKVIVTSSVPQKAHQRQCPKLEVLEI 424
                     56788899*************************************************************************************** PP

                     HHHHHHHHHHHHHT---TT-SS CS
  Pribosyl_synth 163 slllaeairrihngesmsylfr 184
                       l+aeairr+ +ges+s lfr
      KHJ32386.1 425 GPLFAEAIRRMNHGESISSLFR 446
                     *********************9 PP

>> Pribosyltran_N  N-terminal domain of ribose phosphate pyrophosphokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.2   0.0   4.2e-34   1.9e-30       1      95 [.       5      99 ..       5     113 .. 0.96

  Alignments for each domain:
  == domain 1  score: 105.2 bits;  conditional E-value: 4.2e-34
  Pribosyltran_N  1 lkifagssskeLaekiakrlgvelgkakvsrfadgEikveieesvrgkdvfiiqslskpvndnlmelllmidalrrasakritaViPylgysrqd 95
                    ++i+ g+s+++L ++i+++lgv+ ++  +++f+ gE ++ei++svr+kdv+iiqs   +vnd++++l++mi+a++++sa+r+t+V+P ++ysrq 
      KHJ32386.1  5 IVILGGNSHPQLVHEISQNLGVPPCQRILTKFSVGESRLEIQDSVREKDVYIIQSGGGKVNDHFIDLCIMISACKTGSARRVTVVLPLFPYSRQP 99
                    5799*****************************************************************************************95 PP

>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.2   0.1   7.5e-16   3.4e-12      17     119 ..     281     377 ..     269     410 .. 0.88

  Alignments for each domain:
  == domain 1  score: 46.2 bits;  conditional E-value: 7.5e-16
                   ETTEEEEEE--GGGEEEEEEETTTHHHHHHHHHHSTT-EE-EEEEEE-TTT--EE........EE----TTSEEEEE-SEESSSHHHHHHHHHHHCC CS
  Pribosyltran  17 rlaaeileeyngkpdvvvgiargGvpfakiladeLevplayvrkvkyrpdgseeaargssdesrlledpagkkVliVDDildtGgTllaalelLkek 113
                   + +++ + +  +++ v+v ++ gG  +a+ +ad L+ ++a + k+++ +  +e +  +++    l +d+ ++  ++VDD+ dt +T+++a++lLk++
    KHJ32386.1 281 KFIQQNIPS--YQKAVIVSPDAGGAKRATSIADDLNMEFALIHKERRPTRITERQNATMM----LVGDVTNRLAILVDDLADTSNTITRAAKLLKRE 371
                   444444444..7888**********************************99999999998....9******************************** PP

                   -BSEEE CS
  Pribosyltran 114 gpeevr 119
                   g+++v 
    KHJ32386.1 372 GATQVY 377
                   **9985 PP

>> UPRTase  Uracil phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   1.1e-05     0.051     112     186 ..     336     410 ..     309     418 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.1e-05
     UPRTase 112 ynkLPkkiaertvlllDpviaTGgsaaaaiqlLkergvgeekIlvlsvlaseegvkrlaeefpkvkvvtaavDee 186
                    L  ++++r ++l+D +  T++++  a +lLk++g+++   l+   + s  ++ r+ ++  +  +vt++v ++
  KHJ32386.1 336 TMMLVGDVTNRLAILVDDLADTSNTITRAAKLLKREGATQVYALLTHGIFSGDAIPRINASALDKVIVTSSVPQK 410
                 445667788899***************************999999999***999999999999888888888665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (448 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 3164.96
//
Query:       KHJ32387.1  [L=613]
Description: putative leukotriene a-4 hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-44  152.0   0.1    2.4e-44  151.5   0.1    1.2  1  Peptidase_M1     Peptidase family M1 domain
    3.9e-36  123.6   0.0    8.5e-36  122.5   0.0    1.6  1  Leuk-A4-hydro_C  Leukotriene A4 hydrolase, C-terminal
    9.9e-27   94.3   0.0    1.7e-26   93.6   0.0    1.3  1  Peptidase_M1_N   Peptidase M1 N-terminal domain
  ------ inclusion threshold ------
       0.15   12.4   2.1        3.2    8.2   2.1    2.6  1  Peptidase_M61    M61 glycyl aminopeptidase
       0.18   11.1   0.1        0.3   10.4   0.1    1.3  1  CMS1             U3-containing 90S pre-ribosomal complex subu


Domain annotation for each model (and alignments):
>> Peptidase_M1  Peptidase family M1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.5   0.1   6.6e-48   2.4e-44       1     218 []     236     454 ..     236     454 .. 0.86

  Alignments for each domain:
  == domain 1  score: 151.5 bits;  conditional E-value: 6.6e-48
                   HHHHHHHHHHHHHHHHHTS--SSSEEEEEEE.SSTTSSEEEETTEEEEEGGGC-SSTTTS-HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGGHHHH CS
  Peptidase_M1   1 yalevtkkllefleeyfkvpYplpkldlval.pdfsagAMEnwglityreelllvdpenssesdkrsvaeviaHElaHqWfGnlVtmkwWddlwLnE 96 
                   ++le++++ +  ++e++ ++Yp++++++++l p+f++g+MEn+  ++++++ +  d         r +++viaHEl+H+W+GnlV++++W+++wLnE
    KHJ32387.1 236 WELEKDTEKFIEIAENLIFSYPWTQYNVLVLpPSFPYGGMENPIFTFATPTIISGD---------RGNVDVIAHELSHSWSGNLVSNASWEHFWLNE 323
                   799999*************************99***********************.........8899**************************** PP

                   HHHHHHHHHHHHHHSCCCHCHHHH..HHHCHHHHHHHHTSTTHHHSSG.G-G.SHHHHHHTSSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHC CS
  Peptidase_M1  97 Gfatyleylildklepewevseql..lleeveealsedaldeshpitq.eve.kpseidevFdsiaYeKGasllrmlekllgeevFqkglksYlkef 189
                   G++tyle++il+++++e++  +++  ++     + s  + +++h++t+  ++ + +++d++F+s++YeKG+ ll +lekllg+ +F++++ +Y+ + 
    KHJ32387.1 324 GWTTYLERRILSAVHGEAH--RDFfaIIGWKALEDSVTMFGSDHEFTKlVIDlRGRDPDDAFSSVPYEKGFHLLYHLEKLLGKPNFDRFIPHYFCKW 418
                   ****************887..33311222223334444556688888523332589***************************************** PP

                   TTEEE-HHHHHHHHHH......CCCSCHHTH.HHHH CS
  Peptidase_M1 190 kyknaetedlwdalee......alnkdisev.mdtw 218
                   ++k++++ d+ ++l e      ++++++++v +d+w
    KHJ32387.1 419 SMKSLDSYDFKSTLFEffssdsEAQSKLESVdWDSW 454
                   **************9977665544588888877777 PP

>> Leuk-A4-hydro_C  Leukotriene A4 hydrolase, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.5   0.0   2.4e-39   8.5e-36       1     113 []     496     608 ..     496     608 .. 0.99

  Alignments for each domain:
  == domain 1  score: 122.5 bits;  conditional E-value: 2.4e-39
                      --HHHHHHHHHHHHTT-GGG-HHHHHHHHHHTIIIT---HHHHHHHHHHHHHTT-GGGHHHHHHHTTT---HHHHHHHHHHHHTT-HHHHHHHH CS
  Leuk-A4-hydro_C   1 fssnqkvlfLekLlekekplpaekleaLdelYklseskNaeirlrwlqlalkakyeeavpevaeflgsqGrmkfvrplYraLnkvdrdlAketF 94 
                      +++nq+v+fLe+++ + kpl+ ++++a++++Y+l eskN+ei +r++++ l a++ ++++ +a++lg++GrmkfvrplYr+L+ v+ +lA +tF
       KHJ32387.1 496 WNANQVVVFLEQVQLFPKPLSVSQSRAMGQTYSLIESKNVEISSRYISIGLLARDPTVYQLAADLLGKVGRMKFVRPLYRKLVLVNCQLALDTF 589
                      99******************************************************************************************** PP

                      HHHGGGS-HHHHHHHHHHT CS
  Leuk-A4-hydro_C  95 ektkdfyhpiarklvekdL 113
                      ek+k+fyhpi+r+ ++kdL
       KHJ32387.1 590 EKNKEFYHPICRAQLQKDL 608
                      *****************98 PP

>> Peptidase_M1_N  Peptidase M1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.6   0.0   4.7e-30   1.7e-26       2     186 .]      18     205 ..      11     205 .. 0.81

  Alignments for each domain:
  == domain 1  score: 93.6 bits;  conditional E-value: 4.7e-30
                     EEEEEEEEEEETTTTEEEEEEEEEEEES..S-ECEEEEEESSEEEECEEEEECTTCTCEEEEEEEECTTTTC...EEEEECCEEETTCEEEEEEE CS
  Peptidase_M1_N   2 pehYdldlkidlkektfkGsvtitlqlk..eatseivldakdlkiksvslsaevksesvkidfkieqkdeel...ltiklkeslqqtskytLeie 91 
                     ++h d+dl i ++e+ ++G+++ tl+    ++++e++ld+++l+iks+++  +++     +++ + ++ e +   l ik++   ++ s ++++i 
      KHJ32387.1  18 TRHTDVDLVIVFEEQRLTGNINLTLESLtdKESEEVILDTSFLDIKSINIAGSKS-----TEWLVRDRSEPFgspLYIKIPGGISKGSILSVDIS 107
                     56889*********************99999**************9999994433.....444444444444555*******8886665555555 PP

                     EEEE-BSSSSEEE....EEEEEE.TSCEEEEEEEE-TTTTGGGTS-B--STTSEBEEEEEEEEETTSEEEESS.....ECCCEEEETTCEEEEEE CS
  Peptidase_M1_N  92 yegelndklaGly....kstYtd.kgekkvvvvTqfeatdARsafPCfDePsvKAtftisikapkeetalSnm.....peeeseklengqkiteF 176
                      ++  +dk+++++         + +++k +++++q++a++ Rs+fPC+D+P+vK+t++++i++p + ++ S+      + e++e+++ g+  + F
      KHJ32387.1 108 LST--TDKCTAIQwlkpA----QtSNKKYPYMFSQCQAIHNRSIFPCQDTPDVKSTYKFRIRSPLP-VVASGLftgasKFEQKEDKNPGSLLYSF 195
                     555..********75432....339999**************************************.777765222224445555558999**** PP

                     EEEESBEGGG CS
  Peptidase_M1_N 177 eqtpkmstYL 186
                     +q  ++++YL
      KHJ32387.1 196 DQQIPIPSYL 205
                     *********9 PP

>> Peptidase_M61  M61 glycyl aminopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   2.1    0.0009       3.2       3      53 ..     295     334 ..     293     352 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0009
                    HHHHHHHHHHTTBTTTB-BGGGSS---SS----STHHHHTHHHHHHHHHHH CS
  Peptidase_M61   3 lgllaHEyfHsWnvkrirPaelepfdyekenytellwvaEGlTsYygdlll 53 
                    ++++aHE+ HsW ++ +  a+            e  w+ EG+T+Y++  +l
     KHJ32387.1 295 VDVIAHELSHSWSGNLVSNASW-----------EHFWLNEGWTTYLERRIL 334
                    5789999999999876655554...........567889999999887665 PP

>> CMS1  U3-containing 90S pre-ribosomal complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   8.4e-05       0.3     193     226 ..      41      74 ..      28      79 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 8.4e-05
        CMS1 193 eeeslsvdeLkrivlDasfvDkknrgildiretr 226
                 + esl+ +e ++++lD+sf D+k  +i+ ++ t+
  KHJ32387.1  41 TLESLTDKESEEVILDTSFLDIKSINIAGSKSTE 74 
                 7799999999******************999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 4388.84
//
Query:       KHJ32388.1  [L=300]
Description: hypothetical protein EV44_g6229 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-16   59.6   0.0    2.7e-16   59.6   0.0    2.2  2  DUF2011   Fungal protein of unknown function (DUF2011)


Domain annotation for each model (and alignments):
>> DUF2011  Fungal protein of unknown function (DUF2011)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.6   0.0   1.5e-20   2.7e-16       1      86 [.      90     179 ..      90     182 .. 0.94
   2 ?   -1.3   0.9      0.15   2.6e+03      49      68 ..     255     274 ..     195     291 .. 0.63

  Alignments for each domain:
  == domain 1  score: 59.6 bits;  conditional E-value: 1.5e-20
     DUF2011   1 feFrLFssaakaaktqklkirLrspspe.......egeggfivpeRpksYYfaeplseeereqfeeaAvsgedvlaeaksrwpgcelpwrvih 86 
                 ++F LF+++    ++  +k+ L++++         +++ggf+v++R  sYYf+ p+s+  +eq+  +Av+ge+v +++++r++g+e+pwrv  
  KHJ32388.1  90 YNFYLFRNSR---ESSPQKVILEQEQLHllddglnDKQGGFLVSQRKISYYFTPPASKGYKEQLVLSAVEGETVKQWSTQRAWGLEVPWRVQI 179
                 6899**9996...68999****999998999999999******************************************************75 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.15
     DUF2011  49 lseeereqfeeaAvsgedvl 68 
                  ++++ +++++ A++ +++ 
  KHJ32388.1 255 EQQMQMKELKAQALKEKKIR 274
                 44555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2473  (0.137933); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2155.15
//
Query:       KHJ32389.1  [L=240]
Description: putative blumeria specific protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       484  (0.0269954); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1775.50
//
Query:       KHJ32390.1  [L=314]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       748  (0.0417201); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2210.25
//
Query:       KHJ32391.1  [L=296]
Description: putative pyrroline-5-carboxylate reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.5e-32  110.7   1.4    5.3e-32  110.2   1.4    1.3  1  P5CR_dimer     Pyrroline-5-carboxylate reductase dimerisation
    1.1e-06   29.1   1.1    4.6e-05   23.9   1.1    2.8  1  F420_oxidored  NADP oxidoreductase coenzyme F420-dependent


Domain annotation for each model (and alignments):
>> P5CR_dimer  Pyrroline-5-carboxylate reductase dimerisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.2   1.4   5.9e-36   5.3e-32       2     100 ..     191     290 ..     190     293 .. 0.96

  Alignments for each domain:
  == domain 1  score: 110.2 bits;  conditional E-value: 5.9e-36
                 CHHHHHHHHTTTHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHCHS.HHHHHHHH--TTSHHHHHHHHHHHTTHHHHHHHHHHHHHHH CS
  P5CR_dimer   2 kqldavtalsGsgpAyvflliealadagvklGlsreeArelaaqtvaGaaklllese.paelrdkvtspgGtTiaglkeleegglraavieaveaaakr 99 
                 +q+d++talsGsgp +++ll+e+ ++++ ++G++r++A+++aaq+++G+a+l+l++e pa l+dkv+spgG+T  gl+ leeg++r+ v++a+++a k 
  KHJ32391.1 191 SQMDTATALSGSGPGFFALLLESAIEGALAMGMPRDVATRIAAQSMKGTAELILAGEhPAILKDKVSSPGGCTVGGLAILEEGAVRSHVAKAIREASKI 289
                 79**************************************************997778*************************************9876 PP

                 H CS
  P5CR_dimer 100 s 100
                 +
  KHJ32391.1 290 A 290
                 5 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   1.1   5.2e-09   4.6e-05       3      97 .]       7     126 ..       5     126 .. 0.77

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 5.2e-09
                    EEETTSHHHHHHHHHHHHTTS..............-GGCEEEEEESSCCCHHHHHHHHC........-EEECECHHH....HHHH-SEEEE-S-HH CS
  F420_oxidored   3 giiGaGnmgealasgllaaga..............qpheivvansrnpekaeelaeelg........vkvtavdnee....aaeeadvvvlavkpe 72 
                     iiG+Gn+g a++sg+l++ +              + + ++ a  r+pe+ae +++ lg        ++  + dn +     +++ad ++l +kp+
     KHJ32391.1   7 LIIGCGNLGTAILSGILSSIFrstqpnsdsnyensKLKRFI-AYVRQPESAERIKKVLGpvlsqhveIEQHQ-DNRDilpgIVKKADYIILGCKPN 100
                    599************99875555544444455553334455.99*******************995522222.55553333689************ PP

                    HHHHHHHHC..GHHHHTTSEEEEESSS CS
  F420_oxidored  73 dveevlsel..akdalkgklvisvlag 97 
                     v ++l+ +  +++a ++k++ s++ag
     KHJ32391.1 101 SVRSILE-IdgMNEATRDKVLMSICAG 126
                    ******5.4469************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2067.82
//
Query:       KHJ32392.1  [L=403]
Description: putative chorismate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   9.6e-137  455.1   0.0   1.1e-136  454.9   0.0    1.0  1  Chorismate_synt  Chorismate synthase


Domain annotation for each model (and alignments):
>> Chorismate_synt  Chorismate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  454.9   0.0  6.2e-141  1.1e-136       1     327 []       8     385 ..       8     385 .. 0.94

  Alignments for each domain:
  == domain 1  score: 454.9 bits;  conditional E-value: 6.2e-141
                      SEEEEE-SCCSSEEEEEEE---BT-B--HHHHHHHHHHHTCTSSSSSSHHHCS-EEEEESSEETTEE-SS-EEEEEE-TTS-..SS..SSSTSB CS
  Chorismate_synt   1 lrvttfGeShgkalgavidgvpagleldeediqkeLdrRrpgqsklttqrkEkDeveilsGvfegktlGtpiallieNkdqrskdy..eeikev 92 
                      ++vtt+GeSh+ ++g+++dgvp+g++l+eediq +++rRrpgqs+ltt+r+E D v+i sG++ g+tlGtpia++++N+dqr+kdy  ++++ +
       KHJ32392.1   8 FKVTTYGESHCLTVGCIVDGVPPGMKLTEEDIQPQVSRRRPGQSQLTTPRNEFDIVQIQSGTEFGVTLGTPIAMIVRNRDQRPKDYgnSTMDLY 101
                      89************************************************************77**********************54556779 PP

                      E-TTSTCHHHHHHC-S.STHCCCCCTHHCHHHHHHHHHHHHHHHHT.TTEEEEEEEEEETTE............................CHH. CS
  Chorismate_synt  93 pRpgHADltyalkYgirdlrgggrsSaReTaarvaaGavakklLke.lgieivayvssigei............................eke. 156
                      pRp+HADlty +kYgi++++gggrsSaReT++rvaaGa+a+k+Lk  +gieiva+vss+g+i                            e   
       KHJ32392.1 102 PRPSHADLTYLEKYGIKASSGGGRSSARETIGRVAAGAIAEKFLKLsHGIEIVAFVSSVGDInlfppstehpypslnplflsllnsitrdE-Vd 194
                      *********************************************878************8888888899999999999999999998642.22 PP

                      HHHTT-BS-CCCHHHHHHHHHHHHHTT--B-EEEEEEEES--TT-SBTTTB-HHHHHHHHHHTSTTEEEEEETTGGGGGGSBHHHHS--EE... CS
  Chorismate_synt 157 aenpvrcpdeeaaeemeeaieeakkegdslGgvvevvvkgvpaGlGepvfdkldakLakalmsipAvkgveiGsGfeaaelkGseanDeiv... 247
                      + ++vrcpd+ ++e+m+++i ++++++ds+Ggvv++v+++vp GlGepvfdk++a La+a++sipA kg+e+GsGf++++++Gs++nD+++   
       KHJ32392.1 195 QFANVRCPDAIMSEKMANEIVKFRDAHDSIGGVVTCVIRNVPSGLGEPVFDKIEAMLAHAMLSIPASKGFEFGSGFDGCKIPGSKHNDAWIqkp 288
                      5569***************************************************************************************999 PP

                      ..................EESS-TTTTEETTEEBSS-EEEEEEE--SS--SSEEEEEBTTS-E-EEEE--S-S-S-THHHHHHHHHHHHHHHHH CS
  Chorismate_synt 248 ..................lrktnnaGGieGGisnGepivvrvavKpipsiakeqktvdletkeevelevkgrhDpcvvpravvvveamvalvla 323
                                         +k+nn+GG++GGi+nG+pi+++va+Kp ++i k+q+t+++++ e   le+kgrhDpcvvprav++veam+alvl+
       KHJ32392.1 289 mskdnseassngftpsklETKSNNSGGVQGGITNGAPIYFKVAFKPPATIGKPQETATYNGVE-GVLEAKGRHDPCVVPRAVPIVEAMAALVLM 381
                      99999888887776655433*******************************************.****************************** PP

                      HHHH CS
  Chorismate_synt 324 dall 327
                      d l+
       KHJ32392.1 382 DSLM 385
                      *986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       342  (0.0190752); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 3024.28
//
Query:       KHJ32393.1  [L=394]
Description: putative lipoate-protein ligase a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-08   33.8   0.0    4.9e-08   32.9   0.0    1.4  1  BPL_LplA_LipB  Biotin/lipoate A/B protein ligase family
     0.0086   15.9   0.0       0.16   11.8   0.0    2.6  2  KH_2           KH domain


Domain annotation for each model (and alignments):
>> BPL_LplA_LipB  Biotin/lipoate A/B protein ligase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.0   5.5e-12   4.9e-08      11     128 ..     100     210 ..      91     212 .. 0.83

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 5.5e-12
                    HHH..GCGGG--TT-EEEEEEESS-B-B--B-TTSEEEEEEEEESS...-CCGTHHHHHHHHHHHHHHH......HHTT-TTEEEETTTEEEETTE CS
  BPL_LplA_LipB  11 llkeslnsselesgglvvvrrqtgGrnvwhspkgeltyslllspeqktfqnrvlelyvsllvlavlealgyrdskpgiegipvfikwpnDlyvngr 106
                     ++  ln+  ++++++++vrr +gG  v+h+ +g+++y+++  ++ +  +n+ + ++v  l+  +++ +    +    ++i+ + k+  D      
     KHJ32393.1 100 WNEINLNLVRKKAPNIRIVRRRSGGGTVFHD-EGNVNYCVISPTS-SFDRNKHAHMVVQALESVGIKRV----KVNDRHDIVLE-KTEKDGIERPY 188
                    5666788889999******************.********99966.45556666666888888888888....34567778877.*********** PP

                    EEEEEEEEEEETTS-EEEEEEE CS
  BPL_LplA_LipB 107 KlaGiavtstrgktlhhivigv 128
                    K++G+a + tr++ lhh+++++
     KHJ32393.1 189 KISGSAYKLTRSRSLHHGTCLL 210
                    ******************9987 PP

>> KH_2  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   1.8e-05      0.16      16      43 ..      68      96 ..      52     110 .. 0.84
   2 ?    0.9   0.2     0.044     4e+02       5      38 ..     153     184 ..     149     184 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.8e-05
                EEEEEECCS.CEEEEEEEESCHHHHHTGG CS
        KH_2 16 skveIerta.nrviiviresqpgivIGkg 43
                +++  e t+ + vi++++++qp i+IG++
  KHJ32393.1 68 EHFLFEMTPrDSVILFMYTNQPSIIIGRN 96
                55566666669****************97 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.044
                 HHHHHTECETEEEEEEECCSCEEEEEEEESCHHH CS
        KH_2   5 slaveikkagvskveIertanrviiviresqpgi 38 
                  + + +++ g+++v++++  +  i+ +++++ gi
  KHJ32393.1 153 MVVQALESVGIKRVKVND--RHDIVLEKTEKDGI 184
                 5666789999******77..67778888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 2925.59
//
Query:       KHJ32394.1  [L=481]
Description: putative homeobox domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      268  (0.0149478); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 3767.36
//
Query:       KHJ32395.1  [L=511]
Description: hypothetical protein EV44_g1971 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (511 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1055  (0.0588432); expected 358.6 (0.02)
Passed bias filter:                      551  (0.0307323); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 3713.87
//
Query:       KHJ32396.1  [L=1063]
Description: putative ubiquitin conjugation factor e4 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.1e-207  691.6  15.2   1.6e-207  691.0  15.2    1.3  1  Ufd2P_core  Ubiquitin elongating factor core
    1.6e-24   85.9   1.5    3.5e-24   84.8   0.5    2.2  2  U-box       U-box domain


Domain annotation for each model (and alignments):
>> Ufd2P_core  Ubiquitin elongating factor core
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  691.0  15.2  1.8e-211  1.6e-207       1     621 [.     335     953 ..     335     957 .. 0.97

  Alignments for each domain:
  == domain 1  score: 691.0 bits;  conditional E-value: 1.8e-211
                 THHHHT--TTS....HHHHHHHT..TT-TT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHT-GGGGSSS--GGGS--HHH CS
  Ufd2P_core   1 LGpllslsvlpdenepevakkyFsepktrsksdlkstysslrqelktiqenlveiiknllkassesRervlkwlakilnlNekrakiqvdpskvssdgf 99 
                 LGp++++s+++    pe+  +yFs+ k+++ + +++++++lr + + +q +l++i   +++a+ e+R+r+l+w+a +ln+N+kr++++ dp+++s+dgf
  KHJ32396.1 335 LGPFFHISPIQ----PEISLQYFSNVKSMNTRMINTAQEALRLTSQAHQRDLLDITYLFVRANVEARNRTLDWFAYVLNSNHKRRALRPDPTTLSTDGF 429
                 9**********....89********************************************************************************** PP

                 HHHHHHHHHHHHGGGGSTT-TTGGGS-TTTTSS.-SSS--TT--BSSB-HHHHHHHH.HHCTTS---HHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHH CS
  Ufd2P_core 100 mlNllavLlrLcepfldatfskidkidpnylllpskrldlkdetrlnadeeeveefy.eqkekekpnFiteiFfltlkalhlglkpaisefkrllqelk 197
                 +lN+++vL  Lc pf+d +fskidkid++y+++ ++r+ +++et+lnad+e +e++y ++ +  +pnFi+e+Ffltl+a+h+g +++is +k l +++ 
  KHJ32396.1 430 LLNITVVLNGLCSPFMDVSFSKIDKIDTQYFRR-KPRICITEETKLNADQEASENYYkFSLDG-SPNFISEVFFLTLAAHHYGSGGTISMLKSLDKDIG 526
                 *******************************77.********************999655554.89********************************* PP

                 HHHHHHHHHTT-.........HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHSTT--TTSS---S-SSHTS-TTGGG CS
  Ufd2P_core 198 rlqdeleeleae.........aaqleeqlkklkkelekllseklaleavlldpellqellkFlrlvaawllrvadpknlkpkkklklPlpeespeqfkv 287
                  l++++ +le+e           ++eeql+k+++ l+k +s k+a+eavl+d+++++++l F+r+v++wllrva+ ++++p+k++ lPl+++ p+ f++
  KHJ32396.1 527 FLEQKIFQLEQErdkiassqsLLRFEEQLNKFRDVLDKSCSLKYACEAVLFDRTMQAKSLIFMRYVSVWLLRVATCSDYTPDKTIILPLSSNIPDVFRY 625
                 *********999******9998899*************************************************999********************** PP

                 SBTHHHHHHHHHHHHHTTSTT-TTTT.-TTH..HHHHHHHHHHHH-TTS---HHHHHHHHHHHHHCCS--TT..--TTHHHHHH-HHHHCCHHHHHHHH CS
  Ufd2P_core 288 lPeffledivdfllfllrlkpkvlesllssldldeliefiivflrsseyiknphlraklvevlfkgslplse..kgalkklleshelakkhLlkaLlkf 384
                 lPe+ lediv++++f++r+ p++  s  s    del+ ++++fl+ s+yiknp+l+aklv++lf+g++p+++  kg+++++l ++++a+++Ll+aL+kf
  KHJ32396.1 626 LPEYALEDIVNTFIFIFRHIPDITIS--SI--DDELVVLCVTFLE-SDYIKNPYLKAKLVSLLFFGTWPIHHlqKGVISDALIGSKFANDNLLHALMKF 719
                 *******************9998777..33..69**********6.89************************9777*********************** PP

                 HHHCCCT-SSSSSTCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---....-----HHH CS
  Ufd2P_core 385 YidvEktgqssqFydKfniRyniseilkslwknesyrnqltklakeneelFvrFinlllNDvtflldealskLkeikelqeeledqeewsslseeerqe 483
                 YidvE tg+++qFydKfniRy+i++++k++w+n+ y+++l++++k+n ++F+rF+nlllND+t++ldeal+k+++i++lq+el+++    sl++e+r+ 
  KHJ32396.1 720 YIDVELTGAHTQFYDKFNIRYEIFQVIKCIWTNDVYQQRLVQESKKNIDFFLRFVNLLLNDATYVLDEALTKFPKIHDLQNELKTN---FSLNDEQRTA 815
                 ************************************************************************************43...37999***** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-GGGGCSHHHHHHHHHHHHHHHHHHHSHHHHT---SSGGGGT--HHHHHHHHHHHHHHCTT-HHHHH CS
  Ufd2P_core 484 keesleqlerqaksylqlanetvkllklltkeipepfltpeivdrlaamLnynLdqLvGpkcknLkVknpekynFrPkelLssiveiYlnLskeeeFvk 582
                 kee l+++e+qa+sy+ql+netv+++kl+tk+++++f++peivdr+aamL+y+Ld LvGpk++nLkV++++k++F+P++lLs+ ++iYlnLs +e+Fv+
  KHJ32396.1 816 KEEDLRTAESQAQSYMQLTNETVSMMKLFTKSLSASFTMPEIVDRVAAMLDYTLDILVGPKSTNLKVDDMKKFRFEPRTLLSEFIDIYLNLSVSEDFVR 914
                 *************************************************************************************************** PP

                 HHHH-TTT--HHHHHHHHHHHTTSTSSTHHHHHHHHHHH CS
  Ufd2P_core 583 avakDgRsYkkelFekavrilkregllseeelekfkela 621
                 ava+DgRsYk+++Fe a ril+r +l+s++e+  +++l 
  KHJ32396.1 915 AVAQDGRSYKPTNFEAALRILTRYNLKSPDEISAWDDLR 953
                 ***********************************9885 PP

>> U-box  U-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       0.5   4.5e+03      40      65 ..     121     146 ..     101     147 .. 0.81
   2 !   84.8   0.5   3.9e-28   3.5e-24       1      71 [.     973    1043 ..     973    1045 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.5
                 SB-TTT-SB--GGGSEE-HHHHHHHH CS
       U-box  40 ktdPftrepltqdqlipnlelKekId 65 
                   dP  +++l++++li  ++l+++ d
  KHJ32396.1 121 TLDPEKNTKLPNQKLIYLSNLRKELD 146
                 56999999*******99999998765 PP

  == domain 2  score: 84.8 bits;  conditional E-value: 3.9e-28
                  SSGGGB-TTT-SB-SSEEEETTT.EEEEHHHHHHHHTT.SSB-TTT-SB--GGGSEE-HHHHHHHHHHHHHC CS
       U-box    1 iPdefldpitlelmkdPvilpsg.vvvdrstiekhllsrdktdPftrepltqdqlipnlelKekIdefleek 71  
                  iPdefldp+   lmkdPv+lp++ +v+drsti +hlls d++dPf+r+pl+ +++i  +elK++I ++ +e 
  KHJ32396.1  973 IPDEFLDPLLANLMKDPVLLPRSqQVLDRSTIRSHLLS-DPNDPFNRQPLKIEEVIELPELKARITQWKQEA 1043
                  8**********************9**************.*****************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1063 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       973  (0.0542696); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.78u 0.28s 00:00:01.06 Elapsed: 00:00:00.46
# Mc/sec: 6980.08
//
Query:       KHJ32397.1  [L=1079]
Description: putative atp-dependent rna helicase dob1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-91  307.5   1.2    2.3e-91  306.5   1.2    1.6  1  rRNA_proc-arch  rRNA-processing arch domain
    6.1e-49  165.8   2.6    1.9e-48  164.2   1.2    2.3  2  DSHCT           DSHCT (NUC185) domain
    2.7e-19   69.6   0.3    1.1e-18   67.7   0.0    2.2  2  DEAD            DEAD/DEAH box helicase
    1.2e-06   28.8   0.1    6.2e-06   26.5   0.1    2.3  1  Helicase_C      Helicase conserved C-terminal domain
    1.8e-05   24.8   0.0    6.5e-05   23.0   0.0    2.0  1  ResIII          Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
       0.03   13.4   0.0      0.068   12.2   0.0    1.5  1  T2SSE           Type II/IV secretion system protein
      0.045   13.6   1.4       0.11   12.3   0.0    2.5  3  ATPase_2        ATPase domain predominantly from Archaea
      0.047   14.0   0.1        0.3   11.4   0.0    2.4  2  AAA_22          AAA domain
        0.7   10.1   2.8          2    8.7   0.1    2.9  3  DUF5388         Family of unknown function (DUF5388)


Domain annotation for each model (and alignments):
>> rRNA_proc-arch  rRNA-processing arch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  306.5   1.2   1.1e-94   2.3e-91       1     269 [.     611     874 ..     611     875 .. 0.95

  Alignments for each domain:
  == domain 1  score: 306.5 bits;  conditional E-value: 1.1e-94
                     HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHTC--TTHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHGGG--TTEEEEEEETTTEEEEEEEEE CS
  rRNA_proc-arch   1 EyMlerSFsqfqnqkslpelekklkeleeelksitiedeedieeyyklrqqleelreeirkiltkpknilpfLqpGRlvrvksnddldfgwGivl 95 
                     E+Mle++F+qfqn++ ++ lek+l+el e+++ i+i+de++++ey++lrqql+++++++r+i+++p+++l+f+qpGR+vrvk +d++dfgwG+vl
      KHJ32397.1 611 EFMLEHCFYQFQNTSGVSGLEKELEELREKRNVIQIPDEMTVKEYVELRQQLDDYGKDMRNIINHPNYCLQFMQPGRMVRVK-KDNQDFGWGAVL 704
                     9*********************************************************************************.999********* PP

                     EEEE-SSST.TB---TCTTEEEEEEEEEEETTS-GGG--TT--S--TT--B-TT..S-EEEEEEEEEGGGEEEEEEEEE---SSTTSTTHHHHHH CS
  rRNA_proc-arch  96 nfkkrnknskeeeasdeesyvVdvllvlsenskrkdedgekseesaeelkPkagdrekgevevvpvplkcieaiSsvrlklpkdlrkseareeva 190
                     nfk+r++++++ + s++es+++dvl+ +s++s+++++ g   +++++ ++P+  +  kg++ev+pv l+cie+i ++r++lp+dl+++  re+v+
      KHJ32397.1 705 NFKQRKSKGENVKFSPQESFILDVLVSVSQDSPNSQNLG---KNQKQTIRPA--QGGKGRMEVIPVFLSCIESIGQIRIFLPSDLTSARDRENVG 794
                     **9775555455599****************98865555...6677899994..568************************************** PP

                     HHHHHHHHHSS.---B--TTTTS----HHHHHHHHHHHHHHHHHHTSGG.GSSSHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  rRNA_proc-arch 191 kavqelkrrfp.giplldpikdmkikdeefkkllkkiealesrlaknpllhspnleelyalyekkvalqeeikelkkeis 269
                     k+++e+ rrfp gi +ldpi+dm+i+de+fkkll+kie lesrl +npl++sp+le ly++y  k++l ++ike kk++ 
      KHJ32397.1 795 KSLEEVGRRFPdGIAILDPIEDMDITDESFKKLLRKIEILESRLLTNPLHNSPRLEALYNQYLGKQQLSQKIKEKKKSLA 874
                     *************************************************889*************************985 PP

>> DSHCT  DSHCT (NUC185) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.37   7.3e+02      37      84 ..     429     471 ..     422     510 .. 0.70
   2 !  164.2   1.2   9.8e-52   1.9e-48       2     163 ..     902    1073 ..     901    1074 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.37
       DSHCT  37 eelaAllsalvfeekredeeekepkl.seeleealeelkeiaeriakvs 84 
                 e+ a  +s+++f+e++e+       + ++ +++a+++l+++++++ +++
  KHJ32397.1 429 EAYALKMSTMAFNEESEKA------MvTKVFNNAINSLSDEDKQLPQIQ 471
                 5556668999999986553......337889999999999998888775 PP

  == domain 2  score: 164.2 bits;  conditional E-value: 9.8e-52
       DSHCT    2 ntvtlkGrvaaeirs...edeLlltellfsgvlddlepeelaAllsalvfeekredeeekepklseeleealeelkeiaeriakvs........... 84  
                  ++v+lkGrva+ei+s   ++eLll+ellf+ ++++++pe +aA ls+++feek++      + l++ l+e ++ ++ +a+ iakvs           
  KHJ32397.1  902 EVVELKGRVACEISStgdGHELLLSELLFNRFFNEMTPEICAATLSCFIFEEKSQLA----EPLKDVLKEHYSAIQAQARIIAKVSiesklalneke 994 
                  689***********9433469*******************************95432....3579999999999999******999*******9999 PP

       DSHCT   85 .vesrldlglvevvyaWakgasfaellektdldeGdiVRllrrleellrqlakaakvigneeLkkkaeeaielikRdiVf 163 
                   ++s ++++l++vv aWa+g+sfae++++td++eG+++Rl+rrleellrq+a+a kv+g+eeL+k +ee  ++i+RdiV 
  KHJ32397.1  995 yIDS-FKWELMDVVMAWAQGRSFAEICKMTDVYEGSLIRLFRRLEELLRQMAEAGKVMGSEELSKLFEESLTKIRRDIVA 1073
                  7775.9*************************************************************************6 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.7   0.0   5.4e-22   1.1e-18       2     172 ..     159     306 ..     158     309 .. 0.89
   2 ?   -2.2   0.0       1.5   2.9e+03      45      73 ..     943     971 ..     857     996 .. 0.52

  Alignments for each domain:
  == domain 1  score: 67.7 bits;  conditional E-value: 5.4e-22
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdi 100
                 + Q+ +i  i +g++vlv+a+T +GKT ++  ++ q++     k++ ++++ +P ++L +q ++++ + ++ +     l++g+v+ +        ++ +
  KHJ32397.1 159 PFQKVSIASIERGESVLVSAHTSAGKTVVAEYAIAQSL-----KNNQRVIYTSPIKALSNQKYREFASQFSDV----GLMTGDVTINP-------TATC 241
                 68***********************************9.....78889******************9999954....46677777743.......3566 PP

                 EEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 101 vvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkd 172
                 +v+t++ l ++l +g+  +++v+++++DE++ + d+ ++  +++ +  l       + + + ++lSAT+p+ 
  KHJ32397.1 242 LVMTTEILRSMLYRGSEIMREVQWVIFDEIHYMRDKIRGVVWEETIILL-------PDKVRYVFLSATIPNA 306
                 7***********999988**************************99999.......55678********954 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.5
                 STS-EEEEEESSHHHHHHHHHHHHHHTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  45 ktgpkalivePtreLaeqtlnnlkkfkky 73 
                   +  ++i e   +Lae   + lk+  + 
  KHJ32397.1 943 AATLSCFIFEEKSQLAEPLKDVLKEHYSA 971
                 23344444444555555555555555544 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.1   3.1e-09   6.2e-06      15     111 .]     446     557 ..     401     557 .. 0.77

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 3.1e-09
                 TTSEEEEEESSHHHHHH.HHHHHHHT......TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS.....SS....H CS
  Helicase_C  15 eggkilifvntidrlek.vklllekk......gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp.....rn....v 97 
                 +   + +f n i++l++  k l + +         + v+h+ l    +e i   f+++ ++vL at   + G+++p +++V++ +++     +n    +
  KHJ32397.1 446 KAMVTKVFNNAINSLSDeDKQLPQIQhilpllRRGIGVHHSGLLPLLKETIEILFQENLIKVLFATETFSIGLNMP-AKTVVFTSVQkfdgtKNrdltP 543
                 444456888888877556344422223444557788889************************************9.6666665555565554434558 PP

                 HHHHHHHTTSSSTT CS
  Helicase_C  98 tsyiqriGRtgRag 111
                 ++++q++GR+gR g
  KHJ32397.1 544 SEFVQMSGRAGRRG 557
                 ************75 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   3.3e-08   6.5e-05      22     170 ..     169     304 ..     145     305 .. 0.83

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 3.3e-08
                 .TTSEEEEEESTTSTHHHHH.HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHHTH. CS
      ResIII  22 krdkrglikmaTGtGKTlva.aklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqsldadse 119
                 +r + +l+ + T +GKT+va ++++++l+++   ++++   p k+l +q ++ef++ +s+      + ++gd  ++      ++  lv+t++ l + + 
  KHJ32397.1 169 ERGESVLVSAHTSAGKTVVAeYAIAQSLKNN---QRVIYTSPIKALSNQKYREFASQFSDV-----GLMTGDVTIN-----PTATCLVMTTEILRSML- 253
                 5788999*************67777766664...59*******************999975.....7899999998.....899999****9999999. PP

                 .......HHHTTT-SEEEEETGGGTTS.T....TTHH.HHHT---SEEEEEESS-S CS
      ResIII 120 eeeeeseellrdrfdviiiDEaHrlgakk....swre.ilekfkeavllglTATpe 170
                     ++ +    + + +i+DE H +++ k     w+e i+   ++   + l+AT++
  KHJ32397.1 254 ----YRGSEIMREVQWVIFDEIHYMRD-KirgvVWEEtIILLPDKVRYVFLSATIP 304
                 ....77788888888************.4467799997777778888899999975 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   3.4e-05     0.068      43     160 ..      81     203 ..      64     206 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.4e-05
       T2SSE  43 ekaalerlisriaalakldiseerplqdarlp.........ekgvrlrvvllPvvagealviRkksakeltlddlgaeealkekiaevlrkavrergli 132
                 +k+ +  +++ i + + ++ s++++ ++a l+         +++++ +v+l+P  + e ++  k+ ++      +  +      +++v  +++++  ++
  KHJ32397.1  81 KKRRVDEVAEPIVTDTFQTESSRKVAVSAGLTdkdddtlviQHNIQHQVSLPPGYEYEPISQHKSPENPALTWPFELD-----PFQKVSIASIERGESV 174
                 555666666666666666667777777777777777777666677777777777766666655333333222223333.....34444445567778** PP

       T2SSE 133 lvsGgTgsGKttll.yallkeinksderi 160
                 lvs  T+ GKt+++ ya+ + ++++++ i
  KHJ32397.1 175 LVSAHTSAGKTVVAeYAIAQSLKNNQRVI 203
                 *************9889999998885544 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   5.8e-05      0.11      28      79 ..     179     224 ..     163     326 .. 0.64
   2 ?   -2.6   0.0       2.1   4.2e+03     191     215 ..     439     464 ..     404     475 .. 0.54
   3 ?   -2.8   0.1       2.5   4.9e+03     107     128 ..     860     886 ..     819     896 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 5.8e-05
    ATPase_2  28 pegsGKtaLlkeiienledkdkyviyyialreesiskldefieeeeekkkle 79 
                   + GKt +   +i ++++ +++viy ++++  s++k++ef        +++
  KHJ32397.1 179 HTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALSNQKYREFAS------QFS 224
                 5688*************************************33......222 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.1
    ATPase_2 191 dldketalnflkegfkeleel.sked 215
                  ++ e+ + ++ + f++ ++  s+ed
  KHJ32397.1 439 AFNEESEKAMVTKVFNNAINSlSDED 464
                 33333334444444444422223333 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 2.5
    ATPase_2 107 elllekikkkgkk.....iiiiiDelq 128
                 ++l +kik+k+k       ii +Del 
  KHJ32397.1 860 QQLSQKIKEKKKSlasalSIIQLDELK 886
                 345556666655555555555566654 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00015       0.3       5     112 ..     171     286 ..     168     303 .. 0.70
   2 ?   -2.8   0.0       3.5   6.9e+03      96     113 ..     810     829 ..     777     886 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00015
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka............erlsseellealeqalrarav 91 
                   +++v +++ +GKT++++    q  +       + +v++  + +   s + +re+++++ + +                 ++e l+++l++ ++  + 
  KHJ32397.1 171 GESVLVSAHTSAGKTVVAEYAIAQSLKN------NQRVIYTSPIKAL-SNQKYREFASQFSDVGLMtgdvtinptatcLVMTTEILRSMLYRGSEIMRE 262
                 5678999999**********99998653......6666644444433.344444455544444444477999988888888889999999999998888 PP

      AAA_22  92 ielliiDEaqhlr...seealeeL 112
                 ++ +i DE++++r   +  ++ee 
  KHJ32397.1 263 VQWVIFDEIHYMRdkiRGVVWEET 286
                 9***********765434444443 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 3.5
      AAA_22  96 iiDEaqhlr.seealeeL.r 113
                 i+D ++ ++ ++e +++L r
  KHJ32397.1 810 ILDPIEDMDiTDESFKKLlR 829
                 55555554443444443322 PP

>> DUF5388  Family of unknown function (DUF5388)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       0.9   1.8e+03      27      61 ..     189     223 ..     174     225 .. 0.77
   2 ?    8.7   0.1     0.001         2      31      55 ..     442     466 ..     430     475 .. 0.82
   3 ?   -1.7   0.1       1.7   3.4e+03      49      67 ..     819     837 ..     811     837 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.9
     DUF5388  27 aiGlaksqkeavkklveslidsLsesdkkrfkkql 61 
                   ++a+s k+    +  s i  Ls+++ ++f  q+
  KHJ32397.1 189 EYAIAQSLKNNQRVIYTSPIKALSNQKYREFASQF 223
                 55667777777778888999999999999999997 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.001
     DUF5388  31 aksqkeavkklveslidsLsesdkk 55 
                 ++s k +v k+ ++ i+sLs++dk+
  KHJ32397.1 442 EESEKAMVTKVFNNAINSLSDEDKQ 466
                 5799******************987 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1.7
     DUF5388  49 LsesdkkrfkkqleiLEek 67 
                 ++++  k++ + +eiLE++
  KHJ32397.1 819 ITDESFKKLLRKIEILESR 837
                 467778999999*****87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1079 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1188  (0.0662614); expected 358.6 (0.02)
Passed bias filter:                      734  (0.0409393); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.85u 0.28s 00:00:01.12 Elapsed: 00:00:00.44
# Mc/sec: 7408.26
//
Query:       KHJ32398.1  [L=88]
Description: putative cytochrome-c oxidase chain viic [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-21   76.7   3.2    1.6e-21   76.4   3.2    1.1  1  COX7C     Cytochrome c oxidase subunit VIIc


Domain annotation for each model (and alignments):
>> COX7C  Cytochrome c oxidase subunit VIIc
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.4   3.2   8.7e-26   1.6e-21       5      64 .]      25      87 ..      21      87 .. 0.91

  Alignments for each domain:
  == domain 1  score: 76.4 bits;  conditional E-value: 8.7e-26
                XXX..XXXXXXX...XXXX-S--STTTSSSS--SSH.HHHHHHHHHHHHHHHHHHHHHHHHHHTT CS
       COX7C  5 var..Rafhtsar..srsghykegpysnLPFsknnK.ipfavkywgflgvgFalPFlavrwQlkK 64
                +ar  R+fh+  +  s+++hy+egp+sn+PF  n+   +f v+yw+f++vgF +PF++++wQ++K
  KHJ32398.1 25 TARrvRNFHSLGAlkSSPYHYPEGPRSNIPF--NPLtRFFIVRYWTFMAVGFCAPFGIAVWQTYK 87
                44557*****88899****************..***889999**********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       230  (0.0128284); expected 358.6 (0.02)
Passed bias filter:                      176  (0.0098165); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.21s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 685.52
//
Query:       KHJ32399.1  [L=673]
Description: putative serine threonine-protein kinase cbk1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-48  164.8   0.1    1.3e-26   93.6   0.1    3.1  2  Pkinase        Protein kinase domain
    1.4e-23   83.5   0.0    5.9e-16   58.5   0.0    2.3  2  Pkinase_Tyr    Protein tyrosine kinase
     0.0077   16.2   1.0      0.034   14.1   0.7    1.9  2  APH            Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.016   14.2   0.7       0.03   13.3   0.1    1.8  2  Haspin_kinase  Haspin like kinase domain
      0.027   14.5   1.1      0.062   13.3   0.2    2.1  2  RXT2_N         RXT2-like, N-terminal
      0.077   13.0   0.0       0.38   10.8   0.0    2.1  2  Fer2_4         2Fe-2S iron-sulfur cluster binding domain


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.6   0.1   4.2e-30   1.3e-26       1     148 [.     126     290 ..     126     305 .. 0.85
   2 !   65.9   0.0   1.2e-21   3.5e-18     149     251 ..     365     460 ..     355     470 .. 0.82

  Alignments for each domain:
  == domain 1  score: 93.6 bits;  conditional E-value: 4.2e-30
                 EEEEEEEEEESSEEEEEEEE...............TTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TT CS
     Pkinase   1 yekleklGeGsfGkVykave...............ketgkivAvKkikkekakkkke.kkvlrEikilkklk.hpnivrlyevfeekdelylvleyveg 82 
                 y +++ lG+GsfG+V  ++e               +++g+  A+K+i+k+++ ++++  ++ +E  ++   + ++ iv l+ +f++ ++lylv+ey++g
  KHJ32399.1 126 YDVIKILGKGSFGVVRLVKEkyndlnvfdsnqdpqRKRGNVCAMKVIRKSNMLQNSQeGHLHAERDFFVAAEgSRWIVPLITSFQDMENLYLVMEYMPG 224
                 567888999999999887752222222222222225678899*********9998887899*******99999************************** PP

                 EBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEES CS
     Pkinase  83 geladllerkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakel 148
                 g++  ll r+ +lse  +k ++++i+  +e  H+ + iHrD+Kp+N+Li+ +g+lKi+DFGla   
  KHJ32399.1 225 GDFLGLLIRENVLSEPVTKWYIAEIILCIEEAHNLHWIHRDIKPDNFLISASGHLKISDFGLAFDG 290
                 **************************************************************9655 PP

  == domain 2  score: 65.9 bits;  conditional E-value: 1.2e-21
                 SSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-S CS
     Pkinase 149 essskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkk 247
                 +++s ++s+vgts+Y+APEv++++ y++ +D+Ws+++ilye l+g++pf +e+g+        q +k+  + + +++k+p++  +s++++d++++++++
  KHJ32399.1 365 SNRSFARSVVGTSQYMAPEVVRGEIYDARCDWWSMAIILYECLYGHTPFIAEDGSR-------QQTKSNIVNHRSEFKFPQRPVVSRKCQDFIRSVIQE 456
                 3444499*******************************************666655.......2122233445889********************998 PP

                 SGCC CS
     Pkinase 248 dpkk 251
                 ++++
  KHJ32399.1 457 KENR 460
                 7654 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   0.0     2e-19   5.9e-16       4     156 ..     129     295 ..     126     309 .. 0.85
   2 !   22.7   0.0   1.7e-08   5.2e-05     167     244 ..     375     456 ..     358     464 .. 0.67

  Alignments for each domain:
  == domain 1  score: 58.5 bits;  conditional E-value: 2e-19
                  EEEEEEESSEEEEEEEEET...........TTTSSEEEEEEEEESTTSSHHH..HHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEB CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkg...........ekekkevkVavKtlkeeateee..keelleeakimkkl.khpnivkllgvctkeepllivteyvkgGd 87 
                   k lG+G+fG V   + k             ++k+   +a+K+++++++ ++  + +l  e +++ +    + iv l+    + e+l++v+ey++gGd
   KHJ32399.1 129 IKILGKGSFGVVRLVKEKYndlnvfdsnqdPQRKRGNVCAMKVIRKSNMLQNsqEGHLHAERDFFVAAeGSRWIVPLITSFQDMENLYLVMEYMPGGD 226
                  689********9887777677999999875555666778*****8766555422667899********88999************************* PP

                  HHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET..TTS CS
  Pkinase_Tyr  88 LlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi..ekd 156
                  +l  L ++  + l+   +  +++++   +e  ++ + +Hrd+   N L+s + + kisDfGLa d   ++d
   KHJ32399.1 227 FLGLLIRE--NVLSEPVTKWYIAEIILCIEEAHNLHWIHRDIKPDNFLISASGHLKISDFGLAFDGhwSHD 295
                  *****998..9999999999******************************************987633344 PP

  == domain 2  score: 22.7 bits;  conditional E-value: 1.7e-08
                  SGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTS..HHHHHHHHH.HTTEE..S-BBTTSBHHHHHHHHHHT-S CS
  Pkinase_Tyr 167 lpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypgl..kneevlekl.kegkr..lekpekcpeelyelmkkcwee 244
                     ++mapE+++ + +  + D Ws +++l+E +  g++p+     + +++ +++ +++ +   ++   ++++ ++++++  +e
   KHJ32399.1 375 GTSQYMAPEVVRGEIYDARCDWWSMAIILYECLY-GHTPFIAEdgSRQQTKSNIvNHRSEfkFPQRPVVSRKCQDFIRSVIQE 456
                  5679***************************998.****64432244444444323333311444445666666666665555 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.76   2.3e+03      62      83 ..     207     228 ..     180     237 .. 0.74
   2 !   14.1   0.7   1.1e-05     0.034     167     205 ..     260     296 ..     247     305 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.76
                 S-EEETTEEEEEEE----EE-S CS
         APH  62 tddeeigllfalieyvpgrsll 83 
                 t+ ++ + l++++ey+pg ++l
  KHJ32399.1 207 TSFQDMENLYLVMEYMPGGDFL 228
                 55566666899******98876 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 1.1e-05
                 EEE-SS-SGGGEEEC..TTEEEEE---TT-EEEECCHHH CS
         APH 167 vllHgDlhpgNllvdpddgrvtGviDfedaglgpplyDl 205
                  ++H+D++p+N+l+  + g++  + Df++a  g+  +D 
  KHJ32399.1 260 HWIHRDIKPDNFLIS-ASGHL-KISDFGLAFDGHWSHDQ 296
                 69*************.44555.59**********99995 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1     1e-05      0.03     155     254 ..     177     287 ..      91     301 .. 0.85
   2 ?   -2.2   0.1       0.5   1.5e+03      71     102 ..     529     560 ..     517     589 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1e-05
  Haspin_kinase 155 lvkgtypglllllqdkvlkek.........pdfyseqqlflvlllkdkGtdLeevklkswkqalsifwqivkiLyvaEt..kfeFEHRdLhldniL 239
                    +++ + +g+l+  +d+ +  +         + f++ ++l+lv++   +G+ L  +  +++       w i++i+   E+  ++++ HRd++ dn L
     KHJ32399.1 177 MLQNSQEGHLHAERDFFVAAEgsrwivpliTSFQDMENLYLVMEYMPGGDFLGLLIRENVLSEPVTKWYIAEIILCIEEahNLHWIHRDIKPDNFL 272
                    45555577888888888888888899988888889999999999999999999997777766666678888888877752368889********** PP

  Haspin_kinase 240 vdknlnvtlidlkls 254
                    + ++++  + d+ l+
     KHJ32399.1 273 ISASGHLKISDFGLA 287
                    ***********9876 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.5
  Haspin_kinase  71 nsqeevkdfdevilsqilelckikkilneadl 102
                      + +v df+e++++  ++  +i +il++ + 
     KHJ32399.1 529 DDEGSVSDFSESVSETPYSQEDIVNILEPFNS 560
                    55667799999999999999999999988733 PP

>> RXT2_N  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       2.2   6.6e+03      95     107 ..      10      22 ..       8      29 .. 0.77
   2 ?   13.3   0.2   2.1e-05     0.062      74     149 ..     529     605 ..     517     608 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 2.2
      RXT2_N  95 vrleelLaPltsp 107
                   le++L+P+ + 
  KHJ32399.1  10 SSLENILTPIVED 22 
                 5799*****9875 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 2.1e-05
      RXT2_N  74 ededdddeeeaeaaeenpykkvrleelLaPltspsdlithpslsrtykskaLteLalqlie..liekEqeslvklkkL 149
                 +de +  ++ +e+  e py++ ++ ++L+P +s     t++ l+ +y s+ L+e  +++ +  ++   +++l kl kL
  KHJ32399.1 529 DDEGSV-SDFSESVSETPYSQEDIVNILEPFNSEIKTLTQEYLELPYDSTRLKEFEKKIDQfpIVDAQKQNLKKLVKL 605
                 332222.225677889**************************************998876522566666666666555 PP

>> Fer2_4  2Fe-2S iron-sulfur cluster binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0         1   3.1e+03      38      50 ..     159     171 ..     147     179 .. 0.70
   2 ?   10.8   0.0   0.00013      0.38       4      31 ..     310     337 ..     308     369 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1
      Fer2_4  38 ygrprgelcagge 50 
                  +r+rg +ca+ +
  KHJ32399.1 159 PQRKRGNVCAMKV 171
                 4677*****9975 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00013
      Fer2_4   4 vtltfDGkevtvpeGdtvasAllangvd 31 
                 + l++DG ++  +eG tva+A+ +++  
  KHJ32399.1 310 LGLKVDGDSIDKQEGNTVAAAMKTAQMM 337
                 6799******************999854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (673 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       652  (0.0363657); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.43
# Mc/sec: 4718.65
//
Query:       KHJ32400.1  [L=487]
Description: putative fk506-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-34  118.8   3.9    1.4e-34  118.8   3.9    3.0  2  NPL         Nucleoplasmin-like domain
      1e-30  105.9   0.2    6.1e-30  103.4   0.0    2.4  3  FKBP_C      FKBP-type peptidyl-prolyl cis-trans isomerase


Domain annotation for each model (and alignments):
>> NPL  Nucleoplasmin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.8   3.9   1.6e-38   1.4e-34       1     105 []       8     205 ..       8     205 .. 0.84
   2 ?   -6.0   8.1         2   1.8e+04      32      55 ..     316     339 ..     232     388 .. 0.69

  Alignments for each domain:
  == domain 1  score: 118.8 bits;  conditional E-value: 1.6e-38
                 EEEEEE-STTEEEE-...TTSSEEEEEEEE-TT.................................................................. CS
         NPL   1 fyGlevppgkpvtla...vpadlritmaaldpsa................................................................. 31 
                 +yGlevp++++ ++a   +pa++ritmaa+dp++                                                                 
  KHJ32400.1   8 LYGLEVPCDGSPVMAapeFPATFRITMAAIDPDEtpanktsdkniqpratlkiireqddqdsddsedemndllaqsdsededknggpsdpnktkkarka 106
                 6*********6664444599*************9*****999999999999999999999888888888888888888888888888888888888888 PP

                 ............................-BT-EEEEEEEEGGGT..........EEEEEEEEEBTTBSEE---EEEESS-EEEEEEES---EEEEEEEE CS
         NPL  32 .........................ekekekgrvtlkvkvekkkekekeeeeeleefvlctLdpeknyqqpldltfsegeevffkvtGthtVhLtGnyv 105
                                          e  ++kg++++  ++++k+e++++e+ ++e+fv+ctLdp+knyqq+ld+t++e+e+v+fkvtGthtV+LtGny+
  KHJ32400.1 107 aavkqlmdaiaddgsdeemgdvpngEMPDKKGKSKVLENTDDKSETSSQEDIDIEQFVVCTLDPKKNYQQTLDITIGENERVYFKVTGTHTVYLTGNYL 205
                 8888888888888888888888775333556777777777777777777************************************************95 PP

  == domain 2  score: -6.0 bits;  conditional E-value: 2
                 ...-BT-EEEEEEEEGGGT..... CS
         NPL  32 ekekekgrvtlkvkvekkkekeke 55 
                 +k k+++   l+vk+e+ k++e++
  KHJ32400.1 316 KKLKKNNGEALSVKIEDHKKDEEK 339
                 223556666777777766555544 PP

>> FKBP_C  FKBP-type peptidyl-prolyl cis-trans isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.1     1e+04      67      91 ..     170     192 ..     165     193 .. 0.59
   2 ?   -1.5   0.1      0.37   3.3e+03      22      44 ..     363     382 ..     322     383 .. 0.62
   3 !  103.4   0.0   6.8e-34   6.1e-30       5      94 .]     398     484 ..     395     484 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.1
                 GGGTTTTTTBCTTTB.TTSEEEEEE CS
      FKBP_C  67 pelaYgekglaggvippnatLvFev 91 
                 p+ +Y+++     +i +n+ ++F+v
  KHJ32400.1 170 PKKNYQQTLD--ITIGENERVYFKV 192
                 5555555444..2377777777776 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.37
                 SSEEEEHCCHTSEEEEETTSSSS CS
      FKBP_C  22 gkvfdssrsrakplefkvGsgqv 44 
                 + + d+    +kp + ++G ++v
  KHJ32400.1 363 KDKTDQ---SSKPTKATLGVKNV 382
                 222223...57888888888775 PP

  == domain 3  score: 103.4 bits;  conditional E-value: 6.8e-34
                 B-TTCEEEEEEEEEETTSSEEEEHCCHTSEEEEETTSSSSCHHHHHHHTTSBTT-EEEEEEEGGGTTTTTTBCTTTB.TTSEEEEEEEEE CS
      FKBP_C   5 akegdtVtvhykgkledgkvfdssrsrakplefkvGsgqvikGfeealegmkvGekrtltippelaYgekglaggvippnatLvFeveLl 94 
                  k+gd+V++ y gkl +g+vfds+ ++++p++fk+G g+vi+G++ +++gm++G++r+ltipp+ +Yg+k + g  ip+n+tL+F++++l
  KHJ32400.1 398 CKKGDKVSMRYIGKLVNGSVFDSN-KKGTPFSFKLGTGEVIRGWDIGVTGMSAGGERRLTIPPNKGYGNKAMPG--IPANSTLIFDIKML 484
                 589*********************.***********************************************66..***********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (487 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2064  (0.115121); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.81u 0.34s 00:00:01.15 Elapsed: 00:00:00.47
# Mc/sec: 3108.37
//
Query:       KHJ32401.1  [L=435]
Description: hypothetical protein EV44_g3490 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       565  (0.0315132); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 3051.30
//
Query:       KHJ32402.1  [L=1196]
Description: putative gtpase gap [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.4e-11   41.8   0.0      7e-10   38.9   0.0    2.5  3  RhoGAP    RhoGAP domain


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.9   0.0   3.9e-14     7e-10       1     145 [.     203     385 ..     203     389 .. 0.83
   2 ?   -3.2   0.0      0.38   6.9e+03     122     141 ..     605     624 ..     603     625 .. 0.86
   3 ?   -1.6   0.0      0.12   2.2e+03      92     110 ..     933     970 ..     840     995 .. 0.67

  Alignments for each domain:
  == domain 1  score: 38.9 bits;  conditional E-value: 3.9e-14
                 BHHHHHHHHHHHHHTTTSTTTTTS-S-HHHHHHHHHHHHHTGGGCT............TTTTSCHHHHHHHHHHHHHHSSSTTTTG.GHHHHHHH..HH CS
      RhoGAP   1 PiivekcvefiekrgldtegiyRvsgskarvkelreafdkgkavds............dleeedvhavaslLKrfLrelpepLltk.elyeelie..aa 84 
                 P  ++ + +++ ++gl+t g++ ++gs ++v+el + f +  ++++               + dv+++as++KrfL  lp  +l   +l++ li+  + 
  KHJ32402.1 203 PTCFRALAHYLLEYGLTTRGLFLIPGSHNTVNELYNYFCNSCEQSKavagtvrsptlpGHIKCDVYDIASAFKRFLVGLPGGILGSpTLFNVLISinI- 300
                 77889999******************************999999889*********9989999*******************9965167777776332. PP

                 TS.....SSHHHH.......HHHHHHHHTTS-.HHHHHHHHHHHHHHHHHHHTHHH..............H---HHHHHHHHHHHHHT CS
      RhoGAP  85 ks.....edeeer.......lealkellekLP.kenrdtLryLlehLkrvaenske..............nkMtaknLaivfaPtLlr 145
                  +     e+   +        + +  ++ +L+ +  r++++++  +L+ + + ++               + M+ ++L+++f+P ++ 
  KHJ32402.1 301 -QlssgpESM--KtklcyvrSRLIALAVLNLSsESRRNLICAVYGLLCLIGQAAEAmkkkkdlsislpapDYMNYSSLSTIFGPIIIG 385
                 .233444333..2557777645555555566515667889999*******9988888999************************9985 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.38
                 HHTHHHH---HHHHHHHHHH CS
      RhoGAP 122 aenskenkMtaknLaivfaP 141
                 + ns+e k ++knL + f P
  KHJ32402.1 605 SLNSSEKKFNSKNLDLSFVP 624
                 568999********999988 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.12
                 H..................HHHHHHHHT.TS-HHHHHH CS
      RhoGAP  92 r..................lealkelle.kLPkenrdt 110
                 +                  l+++k+ +e +LPk+n++ 
  KHJ32402.1 933 KgivprssllnlrdapslpLRRVKSSIEkSLPKTNYKS 970
                 15555555555555555557888888877888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       837  (0.0466841); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.76u 0.27s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 7916.09
//
Query:       KHJ32403.1  [L=105]
Description: putative small nuclear ribonucleoprotein sm d2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-12   46.2   0.0    3.4e-12   45.9   0.0    1.2  1  LSM       LSM domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.0   1.9e-16   3.4e-12       8      50 ..      46     100 ..      40     105 .] 0.83

  Alignments for each domain:
  == domain 1  score: 45.9 bits;  conditional E-value: 1.9e-16
                 TSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTET............EEE CS
         LSM   8 nkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkk............ekr 50 
                 + +v++ ++n+r+l  ++k+fD+++N+vLe+v+e+++++             ++r
  KHJ32403.1  46 HTQVLISCRNNRKLLARVKAFDRHCNMVLENVKEMWTETPrtsagkkgrpvnKDR 100
                 689*********************************9987776666555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.28s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 756.15
//
Query:       KHJ32404.1  [L=369]
Description: putative nuclear protein snf4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-21   75.8   7.1    2.2e-08   34.4   0.1    4.4  4  CBS       CBS domain


Domain annotation for each model (and alignments):
>> CBS  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.9   0.0    0.0083   1.5e+02       9      55 ..      85     132 ..      75     134 .. 0.81
   2 !   24.8   0.1   1.2e-09   2.2e-05      10      56 ..     168     219 ..     153     220 .. 0.87
   3 !   14.8   0.4   1.6e-06     0.029       8      56 ..     242     290 ..     232     291 .. 0.85
   4 !   34.4   0.1   1.2e-12   2.2e-08       9      56 ..     315     362 ..     299     363 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.0083
                 CEEEETTSBHHHHHHHHHHHT.SSEEEEEETTT.BEEEEEEHHHHHHHH CS
         CBS   9 vvtvppdttleealelmrekg.vsrlPVVdedg.klvGivtlrDllral 55 
                 ++ ++ d  +++ l ++ ++g v + P  d++  k+ G++t +D ++++
  KHJ32404.1  85 LIILDTDLLVKKSLTILLQNGiV-SAPLWDSQTsKFAGLLTTSDYINVV 132
                 56777777788888898899966.99999988899********988765 PP

  == domain 2  score: 24.8 bits;  conditional E-value: 1.2e-09
                 EEEETTSBHHHHHHHHHHHTSSEEEEE...ETTTB..EEEEEEHHHHHHHHH CS
         CBS  10 vtvppdttleealelmrekgvsrlPVV...dedgk..lvGivtlrDllrall 56 
                 v+v+p+ +l ea ++m +++ +r+P +   de g+  +v ++t+  ll++++
  KHJ32404.1 168 VSVNPTRPLYEACRQMLKTRARRIPLIdtdDETGRqmVVSVITQYRLLKFIA 219
                 89****************9999***996655555589************996 PP

  == domain 3  score: 14.8 bits;  conditional E-value: 1.6e-06
                 SCEEEETTSBHHHHHHHHH..HHTSSEEEEEETTTBEEEEEEHHHHHHHHH CS
         CBS   8 dvvtvppdttleealelmr..ekgvsrlPVVdedgklvGivtlrDllrall 56 
                 ++ t++ dt++ +++ +m+  +  +s++P++de+ +++ ++   D++++++
  KHJ32404.1 242 ELQTATMDTSVIDVIHMMVkcS--ISCVPILDEESRVLNVFEAVDVISVIK 290
                 5579999***********6344..99************9999999998876 PP

  == domain 4  score: 34.4 bits;  conditional E-value: 1.2e-12
                 CEEEETTSBHHHHHHHHHHHTSSEEEEEETTTBEEEEEEHHHHHHHHH CS
         CBS   9 vvtvppdttleealelmrekgvsrlPVVdedgklvGivtlrDllrall 56 
                 + t++ ++ l  +++++r+++v+r+ V+d+d +l Gi++l+D+l+++l
  KHJ32404.1 315 IYTCSMEDRLNSIFDTIRKSRVHRFIVIDDDYRLKGIISLSDILKYVL 362
                 4699999**********9999****88976669************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2780.11
//
Query:       KHJ32405.1  [L=596]
Description: putative dihydroxyacetone kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     3e-101  338.4   0.9   4.7e-101  337.8   0.9    1.3  1  Dak1      Dak1 domain
    2.2e-40  138.4   0.0    3.5e-40  137.7   0.0    1.3  1  Dak2      DAK2 domain


Domain annotation for each model (and alignments):
>> Dak1  Dak1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  337.8   0.9  5.3e-105  4.7e-101       2     309 ..      20     348 ..      19     350 .. 0.92

  Alignments for each domain:
  == domain 1  score: 337.8 bits;  conditional E-value: 5.3e-105
                 HHHHH-TTEEEETTTTEEEET...T-S.-TTS-EEEEEEEESSTTTTGGGBSBTSBSEEEEEEETS---HHHHHHH.HHHH--SS-EEEEEESSHHHHH CS
        Dak1   2 Glvaanpelklleeekvvvrk...kek.kkgkValisgGGSGHePahagfVGkgmldaavaGevFaSPsakqilaa.ikavdsgkGvllivkNYtGDvl 95 
                 +lv++np+l++++e+k+++r    + + ++++V+++sgGGSGHeP +  fVGkg+l+aavaG++FaSPsa+qi  a ++ vd  +G+l+i++NYtGDvl
  KHJ32405.1  20 ALVMTNPSLAVDSENKIIYRLhtnN-NaTASQVSIVSGGGSGHEPSFGAFVGKGLLSAAVAGSIFASPSAQQIRIAlMSRVDVRRGILVIIMNYTGDVL 117
                 68999**************985433.2589*******************************************76516778999*************** PP

                 HHHHHHHHHHHTT--EEEEEE--B-SSS.SSTTCSSSB--THHHHHHHHHHHHHHHT--HHHHHHHHHHHHTTEEEEEEEEE--B-TTTSSBSS-.... CS
        Dak1  96 nfglAaekakaegikvetvvvdDDvave.dseekagrRGvagtvlveKiaGaaAeegasLeevaelaekvaenlrsigvalsactvpgagkpsfe.... 189
                 nfg+A+ekaka g++v+ +vv+DDv v+ ++  ++grRG+agtvlv+Ki Ga+A++ asL+e++e+a+ +a+nl+sig++l ++++pg+ + +++    
  KHJ32405.1 118 NFGMAVEKAKAAGLNVRLLVVGDDVGVGrRRLGRVGRRGIAGTVLVHKISGALAARDASLDEIYEVAKLTANNLVSIGASLAHVHIPGKVNFNQNaemv 216
                 ***************************9999*********************************************************97666556677 PP

                 --TTEEEETE-TTS---SEEEE---HHHHHHHHHHHHHH...........TT-EEEEEEEE-BSS-HHHHHHHHHHHHHHHHHT.T-EEEEEEEESSS- CS
        Dak1 190 laedeielGlGiHgEpGvervklksadelveelleklle..dke....lkkgdevvllvNglGgtsllelyivarevaelleek.gikvvrvlvGeyvT 281
                 l+++e+e+G+GiH+E G +r k++   elv+++l++ll+  d +    + +++++vll+N+lGg+s lely ++ ev ++l++  +ik+ r+++G+y++
  KHJ32405.1 217 LGPEEVEIGMGIHNEFGNSRLKTDL-PELVKTMLSQLLDleDLDraflKVDSKDIVLLINNLGGLSVLELYGITFEVLKQLKQVyNIKPIRIYAGTYMS 314
                 **********************877.9***********854444667655599******************************99************** PP

                 -TTBEEEEEEEEEE-......HHHHHHHHS-EES CS
        Dak1 282 sldmaGfsitllkld......dellelldapvet 309
                 sld++Gfsi++l++        ++lelld p+e+
  KHJ32405.1 315 SLDSPGFSISILNVVslqngsLSMLELLDDPAEA 348
                 *************965777777888888888765 PP

>> Dak2  DAK2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.7   0.0   3.9e-44   3.5e-40       2     173 ..     417     588 ..     416     589 .. 0.97

  Alignments for each domain:
  == domain 1  score: 137.7 bits;  conditional E-value: 3.9e-44
                 TS-S-HHHHHHHHHHHHHHHHHC-.--SSHHHHHHHHHHHHHHH--STHHHHHHHHHHHHHHHC..........TT---HHHHHHHHHHHHHHHH---T CS
        Dak2   2 vGDGDtGtnmargaeavlkaleel.eeaslaevlkalakallsgagGtsGvlysqflralakalkekee.....ldaedlaaalkaaleaiqavgkarp 94 
                 vGDGD+G++++r a+a+l+ l++   ++++   l+++ ++++++  GtsG+ly +fl++la +l+++++     ++ + +a al+  ++ + ++++arp
  KHJ32405.1 417 VGDGDCGIGLKRCAQALLNLLSSTtLSGDIVLDLNKIISVIEKSLDGTSGALYTIFLSSLACNLRDQSTnagieITPKIWAFALRISCKDLGNYTPARP 515
                 9***********************9****************************************988779999************************* PP

                 TSSSTHHHHHHHHHHHHT...........T---HHHHHHHHHHCCS---SSGGGGGGGGGT.TS--HHHHHHHHHHHHHH CS
        Dak2  95 gdkTmlDvlrpavealekakdgedlkealekaakaaekgaeaTkellaklgrAsylgersl.gvvDpGAvglalileala 173
                 gd+T++D+l p+ve+l+++ d       l kaa aa+kgae+Tk l+a+lgr  y+g +   +v+DpGA+gl+ +l +la
  KHJ32405.1 516 GDRTLVDALYPFVETLAETGD-------LLKAAIAARKGAEETKGLKARLGRTVYVGGSGYeEVPDPGAWGLSEFLLGLA 588
                 ********************9.......999999**************************988***********998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (596 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4591.64
//
Query:       KHJ32406.1  [L=229]
Description: putative exosomal core protein csl4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-18   67.9   6.4    1.7e-13   51.1   0.2    2.7  3  EXOSC1    Exosome component EXOSC1/CSL4
    1.1e-09   38.0   0.1    2.5e-09   36.8   0.1    1.7  1  ECR1_N    Exosome complex exonuclease RRP4 N-terminal region
  ------ inclusion threshold ------
       0.12   12.3   0.3       0.68    9.9   0.1    2.0  2  CHASE5    Periplasmic sensor domain found in signal transduct


Domain annotation for each model (and alignments):
>> EXOSC1  Exosome component EXOSC1/CSL4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.82   4.9e+03      24      44 ..      66      83 ..      53     102 .. 0.43
   2 !   20.1   0.3   1.2e-07   0.00072       1      29 [.     105     133 ..     105     138 .. 0.91
   3 !   51.1   0.2   2.8e-17   1.7e-13      71     109 .]     138     176 ..     133     176 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.82
                EEEECTBSBCCCEEECCCTTS CS
      EXOSC1 24 ilsvegennvlsdsgvgange 44
                ils+   n+ +s   v a  +
  KHJ32406.1 66 ILSI---NRNISTAKVAAGAQ 83
                4444...22222222222222 PP

  == domain 2  score: 20.1 bits;  conditional E-value: 1.2e-07
                 -S-TT-EEEEEEEEEESSEEEEEEEEECT CS
      EXOSC1   1 lPkegdvVLarvtrlrkkqalveilsveg 29 
                 lP++ + VL rv r++ kqa+v+il+v +
  KHJ32406.1 105 LPEVKSTVLCRVSRITPKQATVSILVVGE 133
                 8*************************944 PP

  == domain 3  score: 51.1 bits;  conditional E-value: 2.8e-17
                 .SEEEEEECCCTECCSSSTT-GGCTEECTTEEEEEEEEC CS
      EXOSC1  71 etfkaiirsqdvRatekdrvkviemfrpGDIvraqviSl 109
                  + +++ir qdvRatekd+vk+ e+frpGDIvra viSl
  KHJ32406.1 138 GEWQGLIRVQDVRATEKDKVKIFESFRPGDIVRASVISL 176
                 5789**********************************8 PP

>> ECR1_N  Exosome complex exonuclease RRP4 N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.8   0.1   4.2e-13   2.5e-09       2      36 ..       5      39 ..       4      41 .. 0.95

  Alignments for each domain:
  == domain 1  score: 36.8 bits;  conditional E-value: 4.2e-13
                E-TT-EEEETTTSEE-TTEEEETTEEEESSSEEEE CS
      ECR1_N  2 VtPGevlttdeefmrGhGTYvrggtiyAsvaGtve 36
                ++PG+ l+ ++ + +G+GT+v++++++As++G v+
  KHJ32406.1  5 AIPGQYLGNTSNYQSGPGTHVYENKLFASILGPVT 39
                79******************************997 PP

>> CHASE5  Periplasmic sensor domain found in signal transduction proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.13   7.7e+02      84     106 ..      65      87 ..      47      89 .. 0.72
   2 ?    9.9   0.1   0.00011      0.68      11      74 ..     111     175 ..      96     205 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.13
      CHASE5  84 pddnvarniGtLeveadldeiyq 106
                 p   + rni t +v a ++++ +
  KHJ32406.1  65 PILSINRNISTAKVAAGAQNVNN 87 
                 55578999999999999999876 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00011
      CHASE5  11 arldeiekatlevLaeslWnlDerllklqLeGlvrLPdidyieike.dsdvrvaaGepktssiln 74 
                 ++l  + ++t +  + s+ ++ e++l+ + +Gl+r+ d+++ e  + +   ++  G+ +  s+++
  KHJ32406.1 111 TVLCRVSRITPKQATVSILVVGETVLNGEWQGLIRVQDVRATEKDKvKIFESFRPGDIVRASVIS 175
                 5667788899999999************************9875442334455556655555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 1846.32
//
Query:       KHJ32407.1  [L=572]
Description: putative vacuolar protein 8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.4e-74  242.5  29.0      4e-13   48.9   0.2   11.3 12  Arm              Armadillo/beta-catenin-like repeat
      4e-20   71.9  15.2    5.2e-06   26.9   0.2    7.8  8  HEAT_EZ          HEAT-like repeat
    2.5e-17   61.5  15.4      0.081   13.2   0.2    9.0  9  HEAT             HEAT repeat
    2.7e-17   62.9   8.5      0.001   19.4   0.1    6.8  7  HEAT_2           HEAT repeats
    1.2e-13   50.5   5.1    5.5e-08   31.8   0.2    2.5  2  Adaptin_N        Adaptin N terminal region
    4.1e-09   36.2   1.2    0.00045   19.6   1.1    3.4  3  V-ATPase_H_N     V-ATPase subunit H
    1.3e-08   34.7   8.9    0.00014   21.4   4.4    3.1  2  Arm_2            Armadillo-like
    2.5e-08   32.6   1.4    3.7e-08   32.0   1.4    1.3  1  KAP              Kinesin-associated protein (KAP)
    2.8e-05   24.2   7.8      0.017   15.2   1.6    4.7  5  Cnd1             non-SMC mitotic condensation complex subunit
    9.9e-05   22.3   7.5        1.2    9.1   0.0    4.3  4  DUF3361          Domain of unknown function (DUF3361)
    0.00016   22.0   5.3        1.3    9.9   0.5    6.5  6  HEAT_PBS         PBS lyase HEAT-like repeat
     0.0005   20.2   4.7         15    5.7   0.2    5.2  7  V-ATPase_H_C     V-ATPase subunit H
     0.0037   16.4   7.1        1.2    8.2   0.0    3.9  4  IFRD             Interferon-related developmental regulator (
      0.008   16.8   0.2        1.1    9.8   0.1    3.6  4  Vac14_Fab1_bd    Vacuolar 14 Fab1-binding region
  ------ inclusion threshold ------
       0.11   12.6   6.3         15    5.7   0.0    4.6  5  Atx10homo_assoc  Spinocerebellar ataxia type 10 protein domai
       0.18   11.7   5.3        1.2    9.1   0.2    3.6  5  UNC45-central    Myosin-binding striated muscle assembly cent
       0.21   11.4   1.5       0.39   10.5   0.3    2.0  2  Vpu              Vpu protein


Domain annotation for each model (and alignments):
>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.32   3.3e+02      14      36 ..      63      85 ..      62      90 .. 0.82
   2 !   22.1   0.0   1.1e-07   0.00011      14      40 ..     101     127 ..      94     128 .. 0.93
   3 !   32.0   0.1   8.2e-11   8.6e-08       1      40 [.     129     168 ..     129     169 .. 0.96
   4 !   31.0   0.0   1.6e-10   1.7e-07       2      40 ..     171     209 ..     170     210 .. 0.95
   5 !   48.9   0.2   3.8e-16     4e-13       1      40 [.     211     250 ..     211     251 .. 0.97
   6 !   23.9   0.4   2.8e-08     3e-05      14      41 .]     267     294 ..     254     294 .. 0.86
   7 !   21.0   0.1   2.3e-07   0.00024       4      40 ..     298     334 ..     295     335 .. 0.92
   8 !   31.8   0.0   9.5e-11     1e-07       3      41 .]     338     377 ..     336     377 .. 0.93
   9 !   14.6   0.4   2.5e-05     0.026       1      40 [.     379     418 ..     379     419 .. 0.95
  10 !   24.1   0.0   2.4e-08   2.6e-05       2      41 .]     421     460 ..     420     460 .. 0.94
  11 ?    3.1   0.0       0.1   1.1e+02      17      37 ..     483     503 ..     482     507 .. 0.89
  12 ?   -1.5   0.0       2.8     3e+03      18      29 ..     503     514 ..     501     515 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.32
                HHHHHHHTTTSSHHHHHHHHHHH CS
         Arm 14 vppLvrLLssedeevqeeAawAL 36
                +++L +L  s+++++q+ A  + 
  KHJ32407.1 63 LRALSTLVFSDNVDLQRSASLTF 85
                579999**********9886665 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 1.1e-07
                 HHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm  14 vppLvrLLssedeevqeeAawALsNLa 40 
                 ++p + LL+s+d evq++A +AL+NLa
  KHJ32407.1 101 LEPILFLLQSPDIEVQRAASAALGNLA 127
                 688999********************8 PP

  == domain 3  score: 32.0 bits;  conditional E-value: 8.2e-11
                 SHHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   1 nsenkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 n enk a++ +G++ pL+r + s+++evq++A+++++NLa
  KHJ32407.1 129 NTENKVAIVLMGGLTPLIRQMMSPNVEVQCNAVGCITNLA 168
                 689************************************9 PP

  == domain 4  score: 31.0 bits;  conditional E-value: 1.6e-10
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 ++nk  + ++Ga+ pL rL +s+d +vq++A++AL N++
  KHJ32407.1 171 EDNKAKIARSGALGPLTRLAKSKDMRVQRNATGALLNMT 209
                 689**********************************97 PP

  == domain 5  score: 48.9 bits;  conditional E-value: 3.8e-16
                 SHHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   1 nsenkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 ++en++++++aGa+p+Lv+LLss d++vq  +++ALsN+a
  KHJ32407.1 211 SDENRQQLVNAGAIPVLVQLLSSSDVDVQYYCTTALSNIA 250
                 689************************************8 PP

  == domain 6  score: 23.9 bits;  conditional E-value: 2.8e-08
                 HHHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm  14 vppLvrLLssedeevqeeAawALsNLaa 41 
                 v  Lv+L++s++++vq++Aa AL+NLa+
  KHJ32407.1 267 VHSLVNLMDSTSPKVQCQAALALRNLAS 294
                 667***********************96 PP

  == domain 7  score: 21.0 bits;  conditional E-value: 2.3e-07
                 HHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   4 nkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                    ++++a ++ppL+rLL+s    +   A+++++N++
  KHJ32407.1 298 YQLEIVRARGLPPLLRLLQSSYLPLILSAVACIRNIS 334
                 56789*******************************8 PP

  == domain 8  score: 31.8 bits;  conditional E-value: 9.5e-11
                 HHHHHHHHTTHHHHHHHHTT.TSSHHHHHHHHHHHHHHTT CS
         Arm   3 enkdavieaGavppLvrLLs.sedeevqeeAawALsNLaa 41 
                  n   +i+aG ++pLv+LL  +++ee+q+ A ++L+NLaa
  KHJ32407.1 338 NNESPIIDAGFLKPLVELLGsTDSEEIQCHAISTLRNLAA 377
                 566789********************************96 PP

  == domain 9  score: 14.6 bits;  conditional E-value: 2.5e-05
                 SHHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   1 nsenkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 +++nk +v eaGav+   +L+ +   +vq e ++A++ La
  KHJ32407.1 379 SDRNKALVLEAGAVQKCKQLILDVPLSVQSEMTAAIAVLA 418
                 689********************************98776 PP

  == domain 10  score: 24.1 bits;  conditional E-value: 2.4e-08
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLaa 41 
                 ++ k ++ ++G+ ++L+ L +se+ evq ++a+AL+NL++
  KHJ32407.1 421 DDLKTHLLSLGVFDVLIPLTNSESIEVQGNSAAALGNLSS 460
                 77889999******************************96 PP

  == domain 11  score: 3.1 bits;  conditional E-value: 0.1
                 HHHHTTTSSHHHHHHHHHHHH CS
         Arm  17 LvrLLssedeevqeeAawALs 37 
                 L r+L s+d + q+ A w++ 
  KHJ32407.1 483 LSRFLASGDATFQHIAIWTIL 503
                 7799***************95 PP

  == domain 12  score: -1.5 bits;  conditional E-value: 2.8
                 HHHTTTSSHHHH CS
         Arm  18 vrLLssedeevq 29 
                 ++LL+sed e+ 
  KHJ32407.1 503 LQLLESEDKELI 514
                 79*****99875 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.2   0.00021      0.22       3      55 .]      77     126 ..      76     126 .. 0.85
   2 !   26.9   0.2   4.9e-09   5.2e-06       2      55 .]     114     167 ..     113     167 .. 0.97
   3 ?    3.3   0.0      0.12   1.2e+02      25      52 ..     178     205 ..     167     208 .. 0.81
   4 !   11.3   0.0   0.00035      0.37      28      55 .]     222     249 ..     209     249 .. 0.90
   5 !   16.2   0.1   1.1e-05     0.011      17      55 .]     254     292 ..     250     292 .. 0.91
   6 ?   -2.0   0.0       5.4   5.7e+03      30      40 ..     308     318 ..     303     333 .. 0.64
   7 ?    5.3   0.0     0.028        29      29      55 .]     348     375 ..     325     375 .. 0.82
   8 !   12.6   0.1   0.00014      0.15      18      55 .]     421     458 ..     406     458 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00021
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 ++r+A ++++   +   ++++ +  + l + l lL++++ eV+ aA  aLgnl
  KHJ32407.1  77 LQRSASLTFA---EITERDVREVGRDTLEPILFLLQSPDIEVQRAASAALGNL 126
                 5778888887...78888888888888999999******************97 PP

  == domain 2  score: 26.9 bits;  conditional E-value: 4.9e-09
     HEAT_EZ   2 rvRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 +v+raA +aLG+la++  + ++ ++   l +L++ +++++ eV+++A+g+++nl
  KHJ32407.1 114 EVQRAASAALGNLAVNTENKVAIVLMGGLTPLIRQMMSPNVEVQCNAVGCITNL 167
                 69*************************************************997 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.12
     HEAT_EZ  25 lvpeilpaLlalLnddsdeVRaaAagaL 52 
                 + + +l +L +l ++++ +V+ +A gaL
  KHJ32407.1 178 ARSGALGPLTRLAKSKDMRVQRNATGAL 205
                 5667889999*****999*******999 PP

  == domain 4  score: 11.3 bits;  conditional E-value: 0.00035
     HEAT_EZ  28 eilpaLlalLnddsdeVRaaAagaLgnl 55 
                  ++p L++lL++++ +V++++  aL+n+
  KHJ32407.1 222 GAIPVLVQLLSSSDVDVQYYCTTALSNI 249
                 579********9999***********97 PP

  == domain 5  score: 16.2 bits;  conditional E-value: 1.1e-05
     HEAT_EZ  17 gepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 +++  l+++  +++  L++l+ + s++V+++Aa aL+nl
  KHJ32407.1 254 NNRKKLAQNENRLVHSLVNLMDSTSPKVQCQAALALRNL 292
                 57788999999**************************97 PP

  == domain 6  score: -2.0 bits;  conditional E-value: 5.4
     HEAT_EZ  30 lpaLlalLndd 40 
                 lp+Ll+lL+++
  KHJ32407.1 308 LPPLLRLLQSS 318
                 45555555443 PP

  == domain 7  score: 5.3 bits;  conditional E-value: 0.028
     HEAT_EZ  29 ilpaLlalL.nddsdeVRaaAagaLgnl 55 
                  l++L+ lL ++ds e+++ A+ +L+nl
  KHJ32407.1 348 FLKPLVELLgSTDSEEIQCHAISTLRNL 375
                 467788888566777**********997 PP

  == domain 8  score: 12.6 bits;  conditional E-value: 0.00014
     HEAT_EZ  18 epellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                  +   ++l   + + L++l n++s eV++++a aLgnl
  KHJ32407.1 421 DDLKTHLLSLGVFDVLIPLTNSESIEVQGNSAAALGNL 458
                 444445566678899*********************97 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       6.3   6.6e+03       8      21 ..      69      83 ..      63      89 .. 0.70
   2 !   12.7   0.0   0.00012      0.12       3      28 ..     102     127 ..     101     129 .. 0.90
   3 !   11.4   0.0   0.00029       0.3       3      29 ..     144     169 ..     142     170 .. 0.84
   4 ?    3.1   0.0      0.14   1.5e+02       4      27 ..     185     208 ..     182     210 .. 0.84
   5 !   10.2   0.0   0.00072      0.76       2      28 ..     224     250 ..     223     251 .. 0.96
   6 !   13.2   0.2   7.6e-05     0.081       2      29 ..     267     294 ..     266     295 .. 0.90
   7 ?    1.9   0.1      0.34   3.6e+02       2      28 ..     308     334 ..     308     336 .. 0.88
   8 ?    2.1   0.0       0.3   3.2e+02       2      29 ..     349     377 ..     348     379 .. 0.80
   9 !    8.6   0.0    0.0023       2.5       2      30 ..     433     461 ..     432     462 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 6.3
                HH.T-SSHHHHHHHH CS
        HEAT  8 ll.sDpspeVReaAa 21
                l  sD+   +R+a++
  KHJ32407.1 69 LVfSDNVDLQRSASL 83
                543788888888875 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00012
                 HHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgala 28 
                  ++l ll++p+ eV +aA  aLg+la
  KHJ32407.1 102 EPILFLLQSPDIEVQRAASAALGNLA 127
                 568889******************98 PP

  == domain 3  score: 11.4 bits;  conditional E-value: 0.00029
                 HHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgalae 29 
                 Pl+ + +++p+ eV ++A+ ++++la 
  KHJ32407.1 144 PLIRQ-MMSPNVEVQCNAVGCITNLAT 169
                 66666.58*****************96 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.14
                 HHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgal 27 
                 +l +l ++++++V ++A  aL ++
  KHJ32407.1 185 PLTRLAKSKDMRVQRNATGALLNM 208
                 678888***********9999765 PP

  == domain 5  score: 10.2 bits;  conditional E-value: 0.00072
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 +P+l++lls+++ +V + +  aL ++a
  KHJ32407.1 224 IPVLVQLLSSSDVDVQYYCTTALSNIA 250
                 8***********************997 PP

  == domain 6  score: 13.2 bits;  conditional E-value: 7.6e-05
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalae 29 
                 +  l++l+ ++sp+V + Aa+aL +la+
  KHJ32407.1 267 VHSLVNLMDSTSPKVQCQAALALRNLAS 294
                 5679999999****************97 PP

  == domain 7  score: 1.9 bits;  conditional E-value: 0.34
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 lP+ll+ll+++      +A+ ++ +++
  KHJ32407.1 308 LPPLLRLLQSSYLPLILSAVACIRNIS 334
                 799*******99999999999998885 PP

  == domain 8  score: 2.1 bits;  conditional E-value: 0.3
                 HHHHHHHHT-.SSHHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsD.pspeVReaAakaLgalae 29 
                 l +l++ll + +s e+ + A+ +L +la 
  KHJ32407.1 349 LKPLVELLGStDSEEIQCHAISTLRNLAA 377
                 778999997735555*********99985 PP

  == domain 9  score: 8.6 bits;  conditional E-value: 0.0023
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalaev 30 
                 +++l+ l +++s eV  ++a aLg+l+++
  KHJ32407.1 433 FDVLIPLTNSESIEVQGNSAAALGNLSSK 461
                 56899999******************986 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.1    0.0005      0.53      11      60 ..      72     128 ..      61     141 .. 0.67
   2 !   17.2   0.0   4.8e-06    0.0051       2      60 ..     143     210 ..     142     221 .. 0.80
   3 !    8.9   0.0    0.0018       1.9      29      61 ..     220     252 ..     214     261 .. 0.82
   4 !   19.4   0.1   9.5e-07     0.001       1      64 [.     224     298 ..     224     323 .. 0.78
   5 !    8.6   0.0    0.0023       2.5       2      60 ..     309     377 ..     308     391 .. 0.63
   6 ?    5.5   0.0     0.022        23      20      60 ..     413     460 ..     405     470 .. 0.71
   7 ?   -2.2   0.0       5.3   5.6e+03      32      46 ..     498     512 ..     492     517 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.0005
      HEAT_2  11 dpdpevrraairaLgrignp.......ealpaLvellededpavRraaaeaLgaigd 60 
                 + + +++r a  + ++i ++       ++l+ ++ ll+++d +v+raa  aLg ++ 
  KHJ32407.1  72 SDNVDLQRSASLTFAEITERdvrevgrDTLEPILFLLQSPDIEVQRAASAALGNLAV 128
                 5566666666666665555533333336688888899****************8763 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 4.8e-06
      HEAT_2   2 daLlqalendpdpevrraairaLg..........rignpealpaLvellededpavRraaaeaLgaigd 60 
                  +L+ ++  +p+ ev+ +a+ ++           +i+   al  L++l++++d++v+r+a  aL  + +
  KHJ32407.1 143 TPLIRQM-MSPNVEVQCNAVGCITnlathednkaKIARSGALGPLTRLAKSKDMRVQRNATGALLNMTH 210
                 5788888.79**************77777766666666699*********************9987753 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.0018
      HEAT_2  29 npealpaLvellededpavRraaaeaLgaigdp 61 
                 n  a+p Lv+ll+++d +v++   +aL+ i+ +
  KHJ32407.1 220 NAGAIPVLVQLLSSSDVDVQYYCTTALSNIAVD 252
                 6789***********************999743 PP

  == domain 4  score: 19.4 bits;  conditional E-value: 9.5e-07
      HEAT_2   1 ldaLlqalendpdpevrraairaLgrignp............ealpaLvellededpavRraaaeaLgaigdpeal 64 
                 +++L+q+l +++d +v++    aL +i+ +            +++  Lv+l+++++p v+ +aa aL  ++++e +
  KHJ32407.1 224 IPVLVQLL-SSSDVDVQYYCTTALSNIAVDannrkklaqnenRLVHSLVNLMDSTSPKVQCQAALALRNLASDEKY 298
                 6899**9*.9********99999995443333445566666799***********************999866543 PP

  == domain 5  score: 8.6 bits;  conditional E-value: 0.0023
      HEAT_2   2 daLlqalendpdpevrraairaLgrig.np.......ea..lpaLvell.ededpavRraaaeaLgaigd 60 
                 ++Ll +l +++   +   a+ ++ +i  +p       +a  l+ Lvell ++++++++ +a+ +L  ++ 
  KHJ32407.1 309 PPLLRLL-QSSYLPLILSAVACIRNISiHPnnespiiDAgfLKPLVELLgSTDSEEIQCHAISTLRNLAA 377
                 6677777.4555555666666666432112233344422559*******777889**********98864 PP

  == domain 6  score: 5.5 bits;  conditional E-value: 0.022
      HEAT_2  20 airaLg.......rignpealpaLvellededpavRraaaeaLgaigd 60 
                 ai +L+        + +  +++ L++l ++e+ +v+ + a aLg + +
  KHJ32407.1 413 AIAVLAlsddlktHLLSLGVFDVLIPLTNSESIEVQGNSAAALGNLSS 460
                 44444422433222333467999********************98865 PP

  == domain 7  score: -2.2 bits;  conditional E-value: 5.3
      HEAT_2  32 alpaLvellededpa 46 
                 a++++++lle+ed +
  KHJ32407.1 498 AIWTILQLLESEDKE 512
                 578899999988865 PP

>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.2   5.2e-11   5.5e-08     116     295 ..      63     250 ..      46     264 .. 0.88
   2 !   19.9   1.3   2.2e-07   0.00023     115     300 ..     266     511 ..     256     537 .. 0.70

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 5.2e-11
                 HHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCTT-SSHHHHHHHHHHHHHH..HCCCCCCCHHHHHHHCCHHHHHHCS-HHHHHHH CS
   Adaptin_N 116 apaikkllkdrspyvrkkAalailklykkdpdllrkqlveeikellsdkdpgvvlaAvalleei..kkndrlllkllpklvrrLcnllteldpwlqvki 212
                 ++a+ +l+ +++  ++++A l+++ + + d   + ++ +e i  ll++ d+ v++aA a+l  +  + +++ ++ l+  l+  ++++  +++   q+  
  KHJ32407.1  63 LRALSTLVFSDNVDLQRSASLTFAEITERDVREVGRDTLEPILFLLQSPDIEVQRAASAALGNLavNTENKVAIVLMGGLTPLIRQM-MSPNVEVQCNA 160
                 5678888888999999*************9988877789*************************77667777679999999999988.899999***** PP

                 HHHHCC---SSHHHH....HHHHHHHCGGCGCSSCHHHHHHHHHCCHCCCCST.....HHHCCHHCHHHHHHSSCCTCHHHHHCHHHHHH CS
   Adaptin_N 213 iklltrlarqepeersk..kellesllnllqssnnaVlletvnlivelapkne.....livlavnaLvrllsskdenlryvaLrtllkiv 295
                 + ++t+la +e+ +++   +  l  l+ l +s+ + V  ++  ++ ++  ++e     ++  a+ +Lv+llss+d  ++y   ++l+ i+
  KHJ32407.1 161 VGCITNLATHEDNKAKIarSGALGPLTRLAKSKDMRVQRNATGALLNMTHSDEnrqqlVNAGAIPVLVQLLSSSDVDVQYYCTTALSNIA 250
                 *********999999558899**********************99988888776667666668889**************9999998886 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 2.2e-07
                 HHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCC.H..HHHHHHCTT-SSHHHHHHHHHHHHHHHCCCCCCC.....HHHHHHHCCHHHHHHCS- CS
   Adaptin_N 115 lapaikkllkdrspyvrkkAalailklykkdpdllrkq.l..veeikellsdkdpgvvlaAvalleeikkndrlll.....kllpklvrrLcnllteld 205
                 l++ + +l+ ++sp v+ +Aala+  l + ++ +l+      ++ +  ll+++   ++l+Ava +  i  ++++ +       l+ lv+ L    ++ +
  KHJ32407.1 266 LVHSLVNLMDSTSPKVQCQAALALRNLASDEKYQLEIVrArgLPPLLRLLQSSYLPLILSAVACIRNISIHPNNESpiidaGFLKPLVELLG---STDS 361
                 789999**********************997777664333349*************************444444443235566666666666...8888 PP

                 HHHHHHHHHHHCC---SSHHHH...............................................HHHHHHHCGGCGCSSCHHHHHHHHHCCHCC CS
   Adaptin_N 206 pwlqvkiiklltrlarqepeer.............................................skkellesllnllqssnnaVlletvnlivela 259
                 + +q+  i++l++la++ ++ +                                             s   +++ l +l +s +  V  +++ ++ +l+
  KHJ32407.1 362 EEIQCHAISTLRNLAASSDRNKalvleagavqkckqlildvplsvqsemtaaiavlalsddlkthllS-LGVFDVLIPLTNSESIEVQGNSAAALGNLS 459
                 99**************9999997777777776666666666666665555555444444333322221.223333333333666666666666666666 PP

                 CCST...........HHHCCHHCHHHHHHSSCCTCHHHHHCHHHHHHHHXXT CS
   Adaptin_N 260 pkne...........livlavnaLvrllsskdenlryvaLrtllkivkkepk 300
                 +k +           ++  +   L r+l s d   + +a+ t+l+++++e k
  KHJ32407.1 460 SKVDdysifvndwdnPCGGIHGYLSRFLASGDATFQHIAIWTILQLLESEDK 511
                 6666666666666666666666677777777776777777777777666644 PP

>> V-ATPase_H_N  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.1   1.7e-06    0.0018      73     216 ..      64     241 ..       9     246 .. 0.71
   2 !   19.6   1.1   4.3e-07   0.00045      99     294 ..     211     398 ..     189     409 .. 0.81
   3 ?   -1.8   0.0       1.4   1.4e+03     117     144 ..     491     520 ..     469     566 .. 0.57

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 1.7e-06
  V-ATPase_H_N  73 lqyiLvlidDllsedksrvelflslakkeeqd....pwkpflkllnrqddfivllalrllakllvqgkkksnklvesaLnrllqlLssqlss..... 160
                   +  +  +++D ++ ++s + +f+++ +++ ++     ++p+l ll+++d  +++ a+  l +l+v  ++k       +L   l+ L  q+ s     
    KHJ32407.1  64 RALSTLVFSDNVDLQRSASLTFAEITERDVREvgrdTLEPILFLLQSPDIEVQRAASAALGNLAVNTENKVAI----VLMGGLTPLIRQMMSpnvev 156
                   4555556677777777777778888777777777789999999999999999999999999999988888777....66666666555555524445 PP

  V-ATPase_H_N 161 ....................................stnevieiavrllqellrtkeyRelfveadgvstlisilrstvanstrvgiQlqYq 216
                                                       ++  v+  a+ +l ++ +++e R+++v+a  +++l+++l       +++++++qY+
    KHJ32407.1 157 qcnavgcitnlathednkakiarsgalgpltrlaksKDMRVQRNATGALLNMTHSDENRQQLVNAGAIPVLVQLL-------SSSDVDVQYY 241
                   555566666666666666666666666666666665566666999999999999999999999999999999999.......7788888887 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 4.3e-07
  V-ATPase_H_N  99 kkeeqd......pwkpflkllnrqddfivllalrllakllvqgkkksnklvesaLnrllqlLssqlssstnevieiavrllqellrtkeyRelfvea 189
                    +e+++       + ++++ll+++d  ++  + + l +++v ++++++    +  nrl+++L ++++s + +v+  a+ +l +l++ ++y   +v a
    KHJ32407.1 211 SDENRQqlvnagAIPVLVQLLSSSDVDVQYYCTTALSNIAVDANNRKKL--AQNENRLVHSLVNLMDSTSPKVQCQAALALRNLASDEKYQLEIVRA 305
                   3222224566666777888**********************99999888..56669999999999999999999999******************** PP

  V-ATPase_H_N 190 dgvstlisilrstvanstrvgiQlqYqvllclWlLsFekkiaeelvkkkelipllvdilrdsvKEKvtRvilatlrNllekaeksskelaavmvqvk 286
                    g+++l+++l       +++ + l+  ++ c+  +s  ++    + +   +++ lv++l ++  E +   +++tlrNl ++   +    +a++++ +
    KHJ32407.1 306 RGLPPLLRLL-------QSSYLPLILSAVACIRNISIHPNNESPIIDAG-FLKPLVELLGSTDSEEIQCHAISTLRNLAASSDRN----KALVLEAG 390
                   **********.......7889999***************9999999999.****************************9998855....44444444 PP

  V-ATPase_H_N 287 llkllenL 294
                   +++ +++L
    KHJ32407.1 391 AVQKCKQL 398
                   44444444 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1.4
  V-ATPase_H_N 117 ddfivllalrllakllvqgkkksnklv..e 144
                   d+ ++++a+  + +ll  ++k+  kl   +
    KHJ32407.1 491 DATFQHIAIWTILQLLESEDKELIKLIgkS 520
                   555555555555555555555544443431 PP

>> Arm_2  Armadillo-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   4.4   1.4e-07   0.00014      14     188 ..     101     278 ..      90     292 .. 0.80
   2 !   13.8   0.1   2.9e-05     0.031       9      92 ..     303     386 ..     293     460 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 1.4e-07
       Arm_2  14 lekllalLkssedpliqeialltlgnsaaysvnqdiirdlggit.iianllsksnaevkekalnalnnlsenvenqkkikvyvnqvckdivssplNsev 111
                 le +l lL+ s d  +q++a  +lgn a+ + n+  i  +gg+t +i +++ ++n ev+ +a+  + nl++ ++n+ ki           ++ +    v
  KHJ32407.1 101 LEPILFLLQ-SPDIEVQRAASAALGNLAVNTENKVAIVLMGGLTpLIRQMM-SPNVEVQCNAVGCITNLATHEDNKAKIARSGALGPLTRLAKSKDMRV 197
                 666666665.679999******************99999988761666655.69**********************99987655444444555567799 PP

       Arm_2 112 QlagLklltnlsvtneyqhll..vsyisellsLLskGnekikvqvLkvllnlseNpamtrellsak..vlssllslfnkke 188
                 Q  +   l n++  +e +  l  +  i+ l++LLs+ ++ ++ +    l+n++   ++ ++l + +     sl+ l ++  
  KHJ32407.1 198 QRNATGALLNMTHSDENRQQLvnAGAIPVLVQLLSSSDVDVQYYCTTALSNIAVDANNRKKLAQNEnrLVHSLVNLMDSTS 278
                 ***********998776444401458************************************9875114678888888766 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 2.9e-05
       Arm_2   9 LepkelekllalLkssedpliqeialltlgnsaaysvnqdiirdlggi.tiianllsksnaevkekalnalnnlsenvenqkkik 92 
                   ++ l  ll lL+ss  pli  ++  +  n   ++ n+  i d g + ++++ l s+ ++e++ +a+++l nl+ +++++k + 
  KHJ32407.1 303 VRARGLPPLLRLLQSSYLPLILSAVACI-RNISIHPNNESPIIDAGFLkPLVELLGSTDSEEIQCHAISTLRNLAASSDRNKALV 386
                 56778889*************9988765.67779************984688888899999*************99998887653 PP

>> KAP  Kinesin-associated protein (KAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   1.4   3.5e-11   3.7e-08     286     527 ..     136     384 ..     108     448 .. 0.80

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 3.5e-11
         KAP 286 mrrknivkllvkaldrdniellilvvsflkklsivvenkdemaeldiveklaklvqsehedllnitlklllnlsfdtglrrkmikvgllpklvalladd 384
                 +     +  l++ +   n+e+    v  +  l+   +nk ++a    +  l++l +s+   + + +   lln++   + r++++++g +p lv+ll+  
  KHJ32407.1 136 IVLMGGLTPLIRQMMSPNVEVQCNAVGCITNLATHEDNKAKIARSGALGPLTRLAKSKDMRVQRNATGALLNMTHSDENRQQLVNAGAIPVLVQLLSSS 234
                 4444455568889999999****************************************9999999999***************************876 PP

         KAP 385 kh..klialkvlyhvslddkvksmftytdc.iqmlmkallesldekvdlelialcinlalnkrnaqlivegnglkllmkralkfkdalllk...llrnl 477
                 +   +  + + l  +++d + +  +++ +  +   +  l++s++ kv+ +      nla + +    iv  +gl  l++       +l+l     +rn+
  KHJ32407.1 235 DVdvQYYCTTALSNIAVDANNRKKLAQNENrLVHSLVNLMDSTSPKVQCQAALALRNLASDEKYQLEIVRARGLPPLLRLLQSSYLPLILSavaCIRNI 333
                 5511556777899*****9988888887642455556678999999*9997666679***9999999********999887777778876422279*** PP

         KAP 478 sqhdgslklqfid..yvgdlarilkesddeelvveclgilanlaltdldyel 527
                 s h  + +  +id  ++  l  +l  +d ee+   ++ +l nla +    + 
  KHJ32407.1 334 SIHP-NNESPIIDagFLKPLVELLGSTDSEEIQCHAISTLRNLAASSDRNKA 384
                 ***9.666777765589**************************976433333 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.45   4.7e+02      37      92 ..      77     133 ..      64     139 .. 0.77
   2 ?    4.1   0.0     0.042        45      22      91 ..     100     173 ..      92     180 .. 0.66
   3 !   15.2   1.6   1.6e-05     0.017      25     137 ..     144     259 ..     140     312 .. 0.65
   4 ?    1.7   0.0      0.22   2.3e+02      41      96 ..     326     387 ..     309     402 .. 0.78
   5 ?    3.6   0.0     0.059        62      39      95 ..     410     469 ..     392     521 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.45
        Cnd1  37 VRktaaivvakLilndmvkekg.flselaklleDenprVvanalaalteiseksena 92 
                  ++ a +++a++ ++d+ ++    l+ ++ ll+ ++ +V+  a aal +++ ++en+
  KHJ32407.1  77 LQRSASLTFAEITERDVREVGRdTLEPILFLLQSPDIEVQRAASAALGNLAVNTENK 133
                 567778888888888888877668889999999999999999999999888876554 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.042
        Cnd1  22 lvepLrkrLkDedpyVRktaaivvakL...ilnd.mvkekgflselaklleDenprVvanalaalteiseksen 91 
                 ++ep+   L+ +d  V++ a  ++ +L    +n+  +   g l  l + +  +n +V+ na+ ++t++++ ++n
  KHJ32407.1 100 TLEPILFLLQSPDIEVQRAASAALGNLavnTENKvAIVLMGGLTPLIRQMMSPNVEVQCNAVGCITNLATHEDN 173
                 56667777788888888888888888874433333344455566666666668888888888888888877544 PP

  == domain 3  score: 15.2 bits;  conditional E-value: 1.6e-05
        Cnd1  25 pLrkrLkDedpyVRktaaivvakL.ilnd...mvkekgflselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalnecsewgqiti 119
                 pL +++  ++  V+ +a+ ++++L  ++d    +  +g l  l +l + ++ rV+ na  al ++ + +en    ++   i  l++ l + + + q + 
  KHJ32407.1 144 PLIRQMMSPNVEVQCNAVGCITNLaTHEDnkaKIARSGALGPLTRLAKSKDMRVQRNATGALLNMTHSDENRQQLVNAGAIPVLVQLLSSSDVDVQYYC 242
                 677777778888888888888888533333335667778888888888888888888888888888887777777777777777766666666666666 PP

        Cnd1 120 lefLlsyipkdkqeaesl 137
                  ++L++   + ++  ++l
  KHJ32407.1 243 TTALSNIAVDANN-RKKL 259
                 6666553322222.2222 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.22
        Cnd1  41 aaivvakL....ilndmvkekgflselakll.eDenprVvanalaalteisek.senaiynl 96 
                 a+ ++ ++     ++  +++ gfl+ l +ll + ++++++  a++ l +++   + n+++ l
  KHJ32407.1 326 AVACIRNIsihpNNESPIIDAGFLKPLVELLgSTDSEEIQCHAISTLRNLAASsDRNKALVL 387
                 6777777774433445899************7666789*********999998655665555 PP

  == domain 5  score: 3.6 bits;  conditional E-value: 0.059
        Cnd1  39 ktaaivvakL..ilndmvkekgflselaklleDenprVvanalaalteisek.senaiyn 95 
                 +taai+v+ L   l++   + g+++ l  l + e+ +V+ n+ aal ++s+k ++  i+ 
  KHJ32407.1 410 MTAAIAVLALsdDLKTHLLSLGVFDVLIPLTNSESIEVQGNSAAALGNLSSKvDDYSIFV 469
                 599999999988778889999******************************986555544 PP

>> DUF3361  Domain of unknown function (DUF3361)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0    0.0011       1.2      67     131 ..     111     174 ..      96     183 .. 0.86
   2 !    7.9   1.4    0.0025       2.7      66     137 ..     192     260 ..     186     297 .. 0.75
   3 ?    1.0   0.1      0.35   3.7e+02      62     121 ..     271     330 ..     262     345 .. 0.55
   4 ?    4.4   0.1     0.031        33      99     149 ..     349     399 ..     323     402 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0011
     DUF3361  67 adasilqrslaiLesivlnsselyelvekevtlesLiehLqssnqeiqtnalaLlnALllkadds 131
                  d ++++++ a L ++++n ++++++v     l+ Li+ + s+n e+q+na+  ++ L ++ d++
  KHJ32407.1 111 PDIEVQRAASAALGNLAVNTENKVAIVLMG-GLTPLIRQMMSPNVEVQCNAVGCITNLATHEDNK 174
                 488999***************999999876.5788*********************999887754 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0025
     DUF3361  66 aadasilqrslaiLesivlnsselyelvekevtlesLiehLqssnqeiqtnalaLlnALllkaddskrkela 137
                 ++d +++++++  L ++ +++++  +lv+    ++ L++ L+ss+  +q ++ + l  + + a++ k  +la
  KHJ32407.1 192 SKDMRVQRNATGALLNMTHSDENRQQLVNAG-AIPVLVQLLSSSDVDVQYYCTTALSNIAVDANNRK--KLA 260
                 4688888999999999988888777777654.67889999999999999888888888887777444..333 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.35
     DUF3361  62 vnks.aadasilqrslaiLesivlnsselyelvekevtlesLiehLqssnqeiqtnalaLl 121
                 vn   ++ ++++ ++   L +++  ++ +  ++ ++  l+ L++ Lqss   +  +a+a +
  KHJ32407.1 271 VNLMdSTSPKVQCQAALALRNLASDEKYQL-EIVRARGLPPLLRLLQSSYLPLILSAVACI 330
                 332223344444444344555544444333.344556677777777777777777777666 PP

  == domain 4  score: 4.4 bits;  conditional E-value: 0.031
     DUF3361  99 lesLiehLqssnqe.iqtnalaLlnALllkaddskrkelaetlskkqlrkvi 149
                 l+ L+e L s+++e iq++a++ l  L + +d++k   ++e+ + ++ +++i
  KHJ32407.1 349 LKPLVELLGSTDSEeIQCHAISTLRNLAASSDRNKAL-VLEAGAVQKCKQLI 399
                 677999998888777*******999999888855544.44444555555555 PP

>> HEAT_PBS  PBS lyase HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0       2.7   2.8e+03      15      27 .]      39      51 ..      23      51 .. 0.78
   2 ?    3.1   0.1      0.19     2e+02       1      13 [.     115     127 ..     115     136 .. 0.90
   3 ?    2.1   0.0      0.42   4.4e+02       1      26 [.     197     232 ..     197     233 .. 0.84
   4 ?   -0.1   0.0         2   2.1e+03       1      13 [.     238     250 ..     238     253 .. 0.88
   5 !    9.9   0.5    0.0013       1.3       1      26 [.     281     316 ..     281     317 .. 0.96
   6 ?    0.6   0.0       1.2   1.3e+03       1      14 [.     447     460 ..     447     464 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 2.7
                GGGHHHHHHHCTC CS
    HEAT_PBS 15 eeaipaLleaLqd 27
                 ea+  Ll+ L++
  KHJ32407.1 39 REAVSDLLQFLEN 51
                699******9985 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.19
                 HHHHHHHHHHHCT CS
    HEAT_PBS   1 vRraAakaLgqlg 13 
                 v+raA  aLg+l 
  KHJ32407.1 115 VQRAASAALGNLA 127
                 89*********96 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.42
                 HHHHHHHHHHHCTS..........GGGHHHHHHHCT CS
    HEAT_PBS   1 vRraAakaLgqlgd..........eeaipaLleaLq 26 
                 v+r+A+ aL ++++            aip+L+++L 
  KHJ32407.1 197 VQRNATGALLNMTHsdenrqqlvnAGAIPVLVQLLS 232
                 789999999999998888888888889999999985 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 2
                 HHHHHHHHHHHCT CS
    HEAT_PBS   1 vRraAakaLgqlg 13 
                 v+++++ aL ++ 
  KHJ32407.1 238 VQYYCTTALSNIA 250
                 89*******9986 PP

  == domain 5  score: 9.9 bits;  conditional E-value: 0.0013
                 HHHHHHHHHHHCTS..........GGGHHHHHHHCT CS
    HEAT_PBS   1 vRraAakaLgqlgd..........eeaipaLleaLq 26 
                 v++ Aa aL +l +           + +p+Ll++Lq
  KHJ32407.1 281 VQCQAALALRNLASdekyqleivrARGLPPLLRLLQ 316
                 8999******************************98 PP

  == domain 6  score: 0.6 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHCTS CS
    HEAT_PBS   1 vRraAakaLgqlgd 14 
                 v+ + a aLg+l +
  KHJ32407.1 447 VQGNSAAALGNLSS 460
                 77889******975 PP

>> V-ATPase_H_C  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.12   1.3e+02      51     114 ..     108     169 ..      94     172 .. 0.73
   2 ?    4.1   0.0     0.044        46      57     110 ..     151     206 ..     128     212 .. 0.74
   3 ?    3.2   0.1     0.089        94      72     112 ..     209     249 ..     186     253 .. 0.76
   4 ?    5.7   0.2     0.015        15      31      69 ..     254     291 ..     252     336 .. 0.78
   5 ?    1.9   0.0      0.22   2.3e+02      70     112 ..     332     375 ..     294     379 .. 0.64
   6 ?    2.4   0.0      0.15   1.6e+02      43      92 ..     348     397 ..     338     420 .. 0.70
   7 ?    1.0   0.0      0.43   4.5e+02      47     101 ..     483     535 ..     478     539 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.12
  V-ATPase_H_C  51 leeskdktvlavalnDigelvkllpegkkvleklkaKekimellehedeevkyeALkavqkllv 114
                   l +s d +v+  a   +g+l+ +++++ +++  +++ + +++ + +++ ev+ +A  ++ +l +
    KHJ32407.1 108 L-QSPDIEVQRAASAALGNLAVNTENKVAIV-LMGGLTPLIRQMMSPNVEVQCNAVGCITNLAT 169
                   4.45666677777777788877766666666.5666777778888999*******999988765 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.044
  V-ATPase_H_C  57 ktvlavalnDigelvkl..lpegkkvleklkaKekimellehedeevkyeALkavq 110
                   + ++ v +n +g +++l  +++ k+ +++ +a   + +l +++d +v+++A  a+ 
    KHJ32407.1 151 SPNVEVQCNAVGCITNLatHEDNKAKIARSGALGPLTRLAKSKDMRVQRNATGALL 206
                   44578899999988877334567777889999999999999999999999977765 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.089
  V-ATPase_H_C  72 kllpegkkvleklkaKekimellehedeevkyeALkavqkl 112
                   ++ +e ++ l + +a  ++++ll+++d +v+y   +a++++
    KHJ32407.1 209 THSDENRQQLVNAGAIPVLVQLLSSSDVDVQYYCTTALSNI 249
                   345677777778899999**************988888776 PP

  == domain 4  score: 5.7 bits;  conditional E-value: 0.015
  V-ATPase_H_C  31 enaekleeknfkllkkLiklleeskdktvlavalnDige 69 
                   +n +kl +++ +l+ +L++l++ s++++v++ a+  + +
    KHJ32407.1 254 NNRKKLAQNENRLVHSLVNLMD-STSPKVQCQAALALRN 291
                   6889999999***********5.6777665555544444 PP

  == domain 5  score: 1.9 bits;  conditional E-value: 0.22
  V-ATPase_H_C  70 lvkllpegkkvleklkaKekimellehe.deevkyeALkavqkl 112
                    ++ +p+ ++ + + +  + ++ell ++  ee++ +A+ ++ +l
    KHJ32407.1 332 NISIHPNNESPIIDAGFLKPLVELLGSTdSEEIQCHAISTLRNL 375
                   44556666666656666555556665551678999999998766 PP

  == domain 6  score: 2.4 bits;  conditional E-value: 0.15
  V-ATPase_H_C  43 llkkLiklleeskdktvlavalnDigelvkllpegkkvleklkaKekime 92 
                    lk L++ll +++++++++ a++ + +l+   ++ k+++ + +a +k  +
    KHJ32407.1 348 FLKPLVELLGSTDSEEIQCHAISTLRNLAASSDRNKALVLEAGAVQKCKQ 397
                   57889999954444677777888888888888888888866666444333 PP

  == domain 7  score: 1.0 bits;  conditional E-value: 0.43
  V-ATPase_H_C  47 LiklleeskdktvlavalnDigelvkllpegkkvleklkaKekimellehe.deev 101
                   L ++l +s d t +++a+  i +l++   e k++++ ++  ++++e++++  d++v
    KHJ32407.1 483 LSRFL-ASGDATFQHIAIWTILQLLES--EDKELIKLIGKSQEVVEMIKKIsDTQV 535
                   55667.577888889999999999888..888999999999999998886436666 PP

>> IFRD  Interferon-related developmental regulator (IFRD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0011       1.2     157     247 ..      35     124 ..      32     131 .. 0.67
   2 !    6.5   0.1    0.0037       3.9     203     242 ..     205     242 ..     197     251 .. 0.69
   3 ?    3.7   0.1     0.027        28     211     244 ..     255     287 ..     243     293 .. 0.73
   4 ?   -3.0   0.2       2.9   3.1e+03     197     248 ..     369     416 ..     351     418 .. 0.47

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0011
        IFRD 157 ggadeeeieelmeflleifssdgqsieaadsaska...lvtaalsawglLltllpssklnkkleedleealealvelLdssdvevriAAGeaiA 247
                 ++++ e++ +l++fl++  + d+ s++   + s+      +   ++ +l + ++ +++++++ ++    +le    lL+s+d+ev+ AA+ a++
  KHJ32407.1  35 AESEREAVSDLLQFLENRGETDFFSGDPLRALSTLvfsDNVDLQRSASLTFAEITERDVREVGRD----TLEPILFLLQSPDIEVQRAASAALG 124
                 66677777777777777777777777765444432232112222344555666666666666665....5999*****************9986 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0037
        IFRD 203 LltllpssklnkkleedleealealvelLdssdvevriAA 242
                 Ll   +s + +++l +    a++ lv+lL+ssdv+v+   
  KHJ32407.1 205 LLNMTHSDENRQQLVN--AGAIPVLVQLLSSSDVDVQYYC 242
                 4444444444444444..679***************9754 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.027
        IFRD 211 klnkkleedleealealvelLdssdvevriAAGe 244
                 + +k++++  +++++ lv+l+ds++ +v+  A  
  KHJ32407.1 255 NRKKLAQN-ENRLVHSLVNLMDSTSPKVQCQAAL 287
                 33344433.3789****************99865 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 2.9
        IFRD 197 lsawglLltllpssklnkkleedleealealvelLdssdvevriAAGeaiAL 248
                 +s +  L+   + +k+  ++      a+++  +l+ +  ++v+  ++ aiA+
  KHJ32407.1 369 ISTLRNLAASSDRNKALVLE----AGAVQKCKQLILDVPLSVQSEMTAAIAV 416
                 33333333333222222222....2245555555555555666666666665 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.54   5.7e+02      19      74 ..      91     146 ..      80     161 .. 0.75
   2 ?   -1.8   0.0       4.6   4.9e+03      23      56 ..     177     210 ..     155     216 .. 0.72
   3 !    9.8   0.1    0.0011       1.1      27      90 ..     222     287 ..     202     295 .. 0.78
   4 ?   -0.6   0.0       1.9     2e+03      24      86 ..     344     408 ..     325     414 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.54
  Vac14_Fab1_bd  19 kkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalv 74 
                    ++++e+ ++ ++p+l  ++  d +v   a+ +l n+a  ++++v  +l   ++ l+
     KHJ32407.1  91 RDVREVGRDTLEPILFLLQSPDIEVQRAASAALGNLAVNTENKVAIVLMGGLTPLI 146
                    458888899999*************9999999999998888887666655555555 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 4.6
  Vac14_Fab1_bd  23 eyleeivkpvlkcfsDkdsrvRyyacEslyniak 56 
                       +  + p+ +  + kd rv   a+ +l n++ 
     KHJ32407.1 177 IARSGALGPLTRLAKSKDMRVQRNATGALLNMTH 210
                    4555566777778888889998888888888765 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.0011
  Vac14_Fab1_bd  27 eivkpvlkcfsDkdsrvRyyacEslyniakva..kgevlkllneifdalvklvaDsdesvksgael 90 
                      ++++++ +s +d  v yy + +l nia  a  ++++ ++ n++ + lv+l+  + ++v+  a+l
     KHJ32407.1 222 GAIPVLVQLLSSSDVDVQYYCTTALSNIAVDAnnRKKLAQNENRLVHSLVNLMDSTSPKVQCQAAL 287
                    46888999********************97652256777888999999999999999999866654 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 1.9
  Vac14_Fab1_bd  24 yleeivkpvlkcfsDkds.rvRyyacEslyniakva.kgevlkllneifdalvklvaDsdesvks 86 
                    +   ++kp+++ +  +ds ++  +a+ +l n+a  + ++++l l     +   +l+ D+  sv+s
     KHJ32407.1 344 IDAGFLKPLVELLGSTDSeEIQCHAISTLRNLAASSdRNKALVLEAGAVQKCKQLILDVPLSVQS 408
                    44567889998887776426999999999999876525667776667777778888888888875 PP

>> Atx10homo_assoc  Spinocerebellar ataxia type 10 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1       1.6   1.7e+03      16      67 ..     129     177 ..     117     184 .. 0.63
   2 ?    5.2   0.3      0.02        21       6      67 ..     243     303 ..     238     308 .. 0.79
   3 ?   -0.5   0.0       1.2   1.3e+03      48      57 ..     325     334 ..     294     346 .. 0.62
   4 ?    5.7   0.0     0.014        15      45      70 ..     364     389 ..     347     411 .. 0.83
   5 ?   -0.4   0.0       1.1   1.1e+03      45      68 ..     494     515 ..     477     544 .. 0.69

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 1.6
  Atx10homo_assoc  16 nkevqdkvreldgleliLsqcniDdnnPfirewailairnLlegneenqelv 67 
                      n+e++  ++  +gl+ ++ q+     n  ++  a+ +i nL  + e+n++ +
       KHJ32407.1 129 NTENKVAIVLMGGLTPLIRQMMS--PNVEVQCNAVGCITNLATH-EDNKAKI 177
                      45566666666777776666553..3444566788888888655.4555555 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.02
  Atx10homo_assoc   6 vrllgnlvyknkevqdkvreldgleliLsqcniDdnnPfirewailairnLlegneenqelv 67 
                         l+n++ + ++ ++  ++++ l   L +  +D+  P ++ +a la+rnL  + +   e+v
       KHJ32407.1 243 TTALSNIAVDANNRKKLAQNENRLVHSLVNL-MDSTSPKVQCQAALALRNLASDEKYQLEIV 303
                      5667888888777777777777888888775.7******************99887766666 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 1.2
  Atx10homo_assoc  48 wailairnLl 57 
                       a+ +irn+ 
       KHJ32407.1 325 SAVACIRNIS 334
                      5899999985 PP

  == domain 4  score: 5.7 bits;  conditional E-value: 0.014
  Atx10homo_assoc  45 irewailairnLlegneenqelvaeL 70 
                      i+ +ai ++rnL  ++ +n++lv e 
       KHJ32407.1 364 IQCHAISTLRNLAASSDRNKALVLEA 389
                      7789*****************99654 PP

  == domain 5  score: -0.4 bits;  conditional E-value: 1.1
  Atx10homo_assoc  45 irewailairnLlegneenqelva 68 
                      ++  ai++i +Lle+    +el++
       KHJ32407.1 494 FQHIAIWTILQLLESE--DKELIK 515
                      6778999999999864..344444 PP

>> UNC45-central  Myosin-binding striated muscle assembly central
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1      0.01        11      82     150 ..     180     246 ..      62     249 .. 0.91
   2 ?    9.1   0.2    0.0011       1.2      79     150 ..     218     289 ..     212     292 .. 0.79
   3 ?    5.7   0.1     0.012        13      82     138 ..     264     320 ..     257     330 .. 0.84
   4 ?   -1.0   0.1       1.5   1.5e+03      83     116 ..     347     382 ..     342     420 .. 0.68
   5 ?   -3.4   0.0         8   8.4e+03      15      42 ..     491     518 ..     483     531 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.01
                    TTHHHHHHHHHHS.S-HHHHHHHHHHHHTT--SSSSSHHHHHHHHHHHHHHHH-SSHH..HHHHHHTTS CS
  UNC45-central  82 egflesllelveskkskkvqlaalellsaAcidkkcrkaiaknyvewLeelvkssddeklvkalAavvL 150
                    +g l  l+ l++sk+ + +  a   ll+   +d+++ ++++   + +L +l+ ssd +  v+ +++ +L
     KHJ32407.1 180 SGALGPLTRLAKSKDMRVQRNATGALLNMTHSDENRQQLVNAGAIPVLVQLLSSSDVD--VQYYCTTAL 246
                    566666778888745555555667899*****************************99..999999888 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0011
                    HTSTTHHHHHHHHHHS.S-HHHHHHHHHHHHTT--SSSSSHHHHHH...HHHHHHHHHH-SSHH..HHHHHHTTS CS
  UNC45-central  79 flsegflesllelveskkskkvqlaalellsaAcidkkcrkaiakn...yvewLeelvkssddeklvkalAavvL 150
                    + + g ++ l++l++s ++ +vq  +  +ls  ++d++ rk  a+n    v  L +l++s++ +  v+  Aa++L
     KHJ32407.1 218 LVNAGAIPVLVQLLSS-SDVDVQYYCTTALSNIAVDANNRKKLAQNenrLVHSLVNLMDSTSPK--VQCQAALAL 289
                    556789999******9.***********************987776111555666666666666..889999887 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.012
                    TTHHHHHHHHHHS.S-HHHHHHHHHHHHTT--SSSSSHHHHHHHHHHHHHHHH-SSH CS
  UNC45-central  82 egflesllelveskkskkvqlaalellsaAcidkkcrkaiaknyvewLeelvkssdd 138
                    ++++ sl++l++s+++k + +aal l + A+  k   + ++ +++  L +l++ss  
     KHJ32407.1 264 NRLVHSLVNLMDSTSPKVQCQAALALRNLASDEKYQLEIVRARGLPPLLRLLQSSYL 320
                    58899********88889999999999*******99999999999999999998765 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 1.5
                    THHHHHHHHHHS.S-HHHHHHHHHHHH..TT--SSS CS
  UNC45-central  83 gflesllelveskkskkvqlaalells..aAcidkk 116
                    gfl+ l+el+ s++s+++q  a+  l   aA++d +
     KHJ32407.1 347 GFLKPLVELLGSTDSEEIQCHAISTLRnlAASSDRN 382
                    667777777777666666666666664223444444 PP

  == domain 5  score: -3.4 bits;  conditional E-value: 8
                    -TTHHHHHHHHHHHHHHHHHHHHHHHHH CS
  UNC45-central  15 pesvrslallilsklldaakeefeeais 42 
                     ++ +++a  ++ +ll+++ +e+++ i 
     KHJ32407.1 491 DATFQHIAIWTILQLLESEDKELIKLIG 518
                    5667778888888888888888877765 PP

>> Vpu  Vpu protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       4.3   4.5e+03       6      22 ..     319     335 ..     315     336 .. 0.80
   2 ?   10.5   0.3   0.00037      0.39      19      63 ..     496     545 ..     487     560 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 4.3
         Vpu   6 liglialivaliiaivv 22 
                  + li+ +va+i +i +
  KHJ32407.1 319 YLPLILSAVACIRNISI 335
                 5679999*****99965 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00037
         Vpu  19 aivvWtivyreykkikkq.......keierlikrireraedSgnESdGeeee 63 
                  i +Wti+     + k+        +e+ ++ik+i++++ dS  E dG+ ee
  KHJ32407.1 496 HIAIWTILQLLESEDKELikligksQEVVEMIKKISDTQVDS--EGDGDIEE 545
                 6889999554444444334466677*****************..88888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (572 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       583  (0.0325172); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.70u 0.32s 00:00:01.02 Elapsed: 00:00:00.46
# Mc/sec: 3715.99
//
Query:       KHJ32408.1  [L=143]
Description: putative prefoldin subunit 4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-22   79.7   4.8    1.8e-22   79.3   4.8    1.2  1  Prefoldin_2     Prefoldin subunit
  ------ inclusion threshold ------
      0.039   14.1   4.4      0.047   13.8   3.9    1.3  1  Spore_III_AB    Stage III sporulation protein AB (spore_III_A
      0.044   13.5   0.2      0.096   12.4   0.2    1.5  1  HTH_DeoR        DeoR-like helix-turn-helix domain
       0.12   12.2   4.2       0.72    9.8   0.1    2.7  2  Matrilin_ccoil  Trimeric coiled-coil oligomerisation domain o
       0.25   11.8  11.0       0.32   11.5  11.0    1.1  1  AAA_23          AAA domain
        1.7    9.2   6.3         21    5.7   2.0    2.8  3  FAM167          FAM167
        3.6    7.9   9.7        1.7    8.9   0.3    2.3  2  Spc24           Spc24 subunit of Ndc80


Domain annotation for each model (and alignments):
>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.3   4.8   6.9e-26   1.8e-22       1     104 [.      33     136 ..      33     138 .. 0.99

  Alignments for each domain:
  == domain 1  score: 79.3 bits;  conditional E-value: 6.9e-26
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-TT--EEEEETTEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2   1 qelinkfqqlqqqlqqlaqqikqletqlkelelvleelelldedtkvyklvGdvlvkqdkeevkeeLeerketlekeiktlekqleklekeleelkee 98 
                  q++inkf++l+ +   l +q++ + ++++el++v++elel ded+k+ +++Gd++v+  + ev+e Le++  ++  ei++le++l+ ++ e+++lk +
   KHJ32408.1  33 QDKINKFSRLHHKEISLGEQLNLKLKEKEELDDVSNELELNDEDDKILYKIGDCFVSLQLREVQELLEASTTKVRNEINQLEEKLSAIRGEMSDLKIH 130
                  89************************************************************************************************ PP

                  HHCCTS CS
  Prefoldin_2  99 lqkklq 104
                  l+++++
   KHJ32408.1 131 LYARFG 136
                  ****97 PP

>> Spore_III_AB  Stage III sporulation protein AB (spore_III_AB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   3.9   1.8e-05     0.047      81     147 ..      51     117 ..      26     121 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.8e-05
                   TSS-HHHHHHHHHHHHGGGS---HHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Spore_III_AB  81 egesfeeaweeavekllkklaLkkedkeilkelgeslgysdregqlkalelaleeleeeieeareea 147
                   e+ +++   +e+++   ++l L++ed +il+++g+++ ++ + + ++ le    ++++ei +++e+ 
    KHJ32408.1  51 EQLNLKLKEKEELDDVSNELELNDEDDKILYKIGDCFVSLQLREVQELLEASTTKVRNEINQLEEKL 117
                   555555555889999999**********************************************986 PP

>> HTH_DeoR  DeoR-like helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   3.8e-05     0.096      14      46 ..      89     121 ..      88     123 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.8e-05
    HTH_DeoR  14 klsveelvellgvSeaTiRRDLneLeeqglltR 46 
                 +l++ e+ ell+ S++ +R+ +n+Lee+   +R
  KHJ32408.1  89 SLQLREVQELLEASTTKVRNEINQLEEKLSAIR 121
                 58899**********************988777 PP

>> Matrilin_ccoil  Trimeric coiled-coil oligomerisation domain of matrilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   1.0     0.041   1.1e+02      30      42 ..      56      74 ..      26      76 .. 0.79
   2 ?    9.8   0.1   0.00028      0.72      18      36 ..     104     122 ..     103     128 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.041
                    H......HHHHHHHHHHHH CS
  Matrilin_ccoil 30 k......LeavtkRlealE 42
                    k      L++v++ le ++
      KHJ32408.1 56 KlkekeeLDDVSNELELND 74
                    3344477*****9999776 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00028
                     HHHHHHHHHHHHHHHHHHH CS
  Matrilin_ccoil  18 tkVeseiqaLtqkLeavtk 36 
                     tkV +ei++L +kL+a+  
      KHJ32408.1 104 TKVRNEINQLEEKLSAIRG 122
                     79*************9965 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5  11.0   0.00012      0.32     117     199 ..      22     117 ..       4     120 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00012
      AAA_23 117 leqfisellgskkiilnlilflgqer...feefelkdkkerleelekeleeledekkllekl..........eqekekekeleeleeeleeilkel 199
                 ++++++   + +++i++++ ++++e    ++ +++ ++ke+l+++++ele + +++k l k           e ++  e+  +++++e+++++++l
  KHJ32408.1  22 RTDEVEVRREDQDKINKFSRLHHKEIslgEQLNLKLKEKEELDDVSNELELNDEDDKILYKIgdcfvslqlrEVQELLEASTTKVRNEINQLEEKL 117
                 334444344455668888888888889998888999999*****************9999999999996654333334448889999999999998 PP

>> FAM167  FAM167
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1      0.37   9.4e+02      29      55 ..      17      42 ..       6      58 .. 0.66
   2 ?    5.7   2.0    0.0082        21      29      55 ..      57      83 ..      28     105 .. 0.68
   3 ?    4.7   0.1     0.017        44       3      25 ..     108     130 ..     106     135 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.37
      FAM167 29 eehkemLddatleleeeeelsdllvdl 55
                +e ++  d+++++ e+++++++  ++l
  KHJ32408.1 17 KEEEARTDEVEVRREDQDKINKF-SRL 42
                55566668888888888777665.443 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0082
      FAM167 29 eehkemLddatleleeeeelsdllvdl 55
                 + ke Ldd++ ele ++e  ++l ++
  KHJ32408.1 57 LKEKEELDDVSNELELNDEDDKILYKI 83
                356788999999999999999988765 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.017
      FAM167   3 aqDqqlarqLlrlrseikklkve 25 
                  + +ql ++L  +r e+++lk++
  KHJ32408.1 108 NEINQLEEKLSAIRGEMSDLKIH 130
                 5668999**************96 PP

>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   5.2      0.12   3.1e+02       4      57 ..      30      83 ..      13      97 .. 0.74
   2 ?    8.9   0.3   0.00067       1.7      20      64 ..      96     136 ..      88     143 .] 0.71

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.12
       Spc24  4 nekfriakelsdleselesleselaelkeeleeleeeseekeservedetllkl 57
                +e ++ +++ s l+ +  sl ++l+ + +e eel++ s+e e + ++d+ l+k+
  KHJ32408.1 30 REDQDKINKFSRLHHKEISLGEQLNLKLKEKEELDDVSNELELNDEDDKILYKI 83
                555666777788888888888888888888888888888833332446666665 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00067
       Spc24  20 lesleselaelkeeleeleeeseekeserve.detllklklYrsLG 64 
                  e le++ ++ ++e+++lee+ ++        + + lk++lY  +G
  KHJ32408.1  96 QELLEASTTKVRNEINQLEEKLSA-----IRgEMSDLKIHLYARFG 136
                 455777888888888888888888.....44356669999998877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1523  (0.0849462); expected 358.6 (0.02)
Passed bias filter:                      566  (0.031569); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1037.84
//
Query:       KHJ32409.1  [L=268]
Description: hypothetical protein EV44_g3686 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.01   15.9   0.8      0.019   15.0   0.2    1.8  2  zf-CCHC   Zinc knuckle
      0.078   13.4   0.2       0.17   12.3   0.2    1.5  1  LPP       Lipoprotein leucine-zipper


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.48   4.3e+03       8      14 ..     114     120 ..     113     120 .. 0.80
   2 ?   15.0   0.2   2.1e-06     0.019       3      15 ..     169     181 ..     167     181 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.48
                 SSSSTTT CS
     zf-CCHC   8 epGHiar 14 
                 +  Hiar
  KHJ32409.1 114 QQEHIAR 120
                 678***8 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 2.1e-06
                 TSSSSSSSSTTTT CS
     zf-CCHC   3 CynCGepGHiard 15 
                 C +CGe GHi++d
  KHJ32409.1 169 CVTCGEKGHISKD 181
                 889*********9 PP

>> LPP  Lipoprotein leucine-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   1.9e-05      0.17       7      28 ..      10      31 ..       8      35 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.9e-05
         LPP  7 sqVsqLkskvdqlssdvnsaka 28
                + +s+L++k+++l+s+vn++++
  KHJ32409.1 10 DKISSLNDKISSLQSEVNALQT 31
                5699**************9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       786  (0.0438396); expected 358.6 (0.02)
Passed bias filter:                      668  (0.0372581); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 1995.44
//
Query:       KHJ32410.1  [L=316]
Description: putative aldose 1-epimerase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.9e-37  128.2   0.0    4.8e-37  127.9   0.0    1.0  1  Aldose_epim  Aldose 1-epimerase


Domain annotation for each model (and alignments):
>> Aldose_epim  Aldose 1-epimerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.9   0.0   2.7e-41   4.8e-37       9     300 ..      37     313 ..      30     314 .. 0.90

  Alignments for each domain:
  == domain 1  score: 127.9 bits;  conditional E-value: 2.7e-41
                  TEEEEEECTCTTEEEEEEETT.STEESB-B-STHHHHHHSCCSSCEECSS-SEEETTEEEETTEEEECCCCBT.......TTCEETBSGGGSB-EEEE CS
  Aldose_epim   9 aglsakislyGAtllslkvpdkeqrevllgsddaeeylkdsyfgatlgrvanRianGeFeldGkpyqlpqnee.......gknplHGgargreWevee 99 
                  +g s+ + l+GAt++s+k+++  ++e l++s+           + ++g++++R   G     G+p  +p++++       +++p+HG+ar ++We   
   KHJ32410.1  37 TGESIIVLLHGATIISWKDKS--GNEQLWLSEA----------AKLDGSKPVR---G-----GIPLVFPVFGTdnshpatSQLPQHGFARTSRWEFLG 114
                  578999***************..77*******8..........7*********...8.....************************************ PP

                  EEE.....TTEEEEEEEEEEETC.HC....STSEEEEEEEEEEETTEEEEEEEEEEESS.S-EEEEEEEEEEEETSSCTCTGGEEEEEEEEEEEECTT CS
  Aldose_epim 100 vke.....ddgvtvslvlkpdge.eg....ypgdlevrvtytLnednelkieyeatndg.kptpfnltnHtYFnlsgesidshelqieadeylevdee 186
                  +++      d+v +++ l+ ++  e+    +p+++ + +++tL +++ l+  + + n+g  ++ f+   HtYF+++    d+  ++i+++e   + + 
   KHJ32410.1 115 KSTtepgdGDSVKLDFGLQTNNLnEEtkklWPFSFGLIYSITLAQNE-LTTSILVINEGqSAWEFQTLMHTYFRVK----DIFSVEIKGLESSSYID- 206
                  99999*9988888888887666544489*****************77.****************************....999******99999999. PP

                  SGEEEEEEECTTCCCCCCSSEEHCSSETEEEEEEEESSCSEEEEEETTTTEEEEEEEETTSSEEEEEECTTTT..SEECCEEESSECTCETCCCECHH CS
  Aldose_epim 187 liptgelkdvkgtpfdfrqpkaigedlkglDhayllksklkaviidpdkksgiklevsttepalvvytgnflk..kylsreglaletqmlpdepnhpe 282
                       +l +   t + ++++ +i  +   +D++y l + ++  i + +++++i    + +  ++v+++++ +    + + ++ ++ ++m+++e ++++
   KHJ32410.1 207 -----KLSNPITTKTSSSSSVKISSR---IDQVYSLLEDKNTPISILENGKKIFNISRDNLSDVVIWNPWSEGaaSMTDFAPTEGFKEMICVESGSVK 296
                  .....555666666655677777766...6*******9888889999999999999999999************9999999999************** PP

                  HT-EEEHTTTEEEEEEEE CS
  Aldose_epim 283 fpsivlkpGesysaetsy 300
                  +  i l pGe++s ++++
   KHJ32410.1 297 DW-IELGPGETWSGSQII 313
                  99.**********99877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2382.82
//
Query:       KHJ32411.1  [L=456]
Description: putative guanine nucleotide exchange factor synembryn [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.8e-110  370.2  13.3     5e-110  368.7  13.3    1.6  1  Ric8      Guanine nucleotide exchange factor synembryn


Domain annotation for each model (and alignments):
>> Ric8  Guanine nucleotide exchange factor synembryn
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  368.7  13.3  2.8e-114    5e-110       2     459 .]      46     445 ..      45     445 .. 0.96

  Alignments for each domain:
  == domain 1  score: 368.7 bits;  conditional E-value: 2.8e-114
        Ric8   2 LetLkilgRdpkgldplftkeaistLlklafdssstsaslekeseeevareAlrcLaNalllsekarqrlverlkggeekavellkkdksspadiefld 100
                 L +LkilgRdp++++pl+t+++i++L+++af s+s+++s          r+A +cLaNa+ll +++rq++v+  +g e+k++e+lk+d   ++++efl 
  KHJ32411.1  46 LDKLKILGRDPSNSSPLYTNDGIKILASYAFTSHSPTTS----------RNASKCLANAMLLRAETRQMFVD--LGLEDKICEKLKID---NSEDEFLM 129
                 899************************************..........***********************..99************...******** PP

        Ric8 101 sRllFLlTaleseirkelkelveeesllaealeqilkrkakevsssdeaasslskeesealselLKllFnltlhypksvldeeeaeelseklarllppl 199
                  R++FL+T+  s+i+   ++l+++++ la+++  ++ r++k++  s++++s +++ e++al+e LKl+Fnlt+++p ++ +          +   l  l
  KHJ32411.1 130 TRIIFLTTYA-SNIK--PEKLIDQNN-LADNICLNIRRHTKRFL-SQSEQSCTDPFEEMALNENLKLIFNLTHFFPMRKVA----------FHIVLKDL 213
                 **********.9999..999999999.**************988.99*****************************55544..........******** PP

        Ric8 200 lrlllllpipspdpLkpplthlinaLlnlpleeskkeaalfpssaegnnmdvvsrllelldkrlaaadekkdkdaeleekltpllllLtklaeaa.eev 297
                 + ll+ lpi++++pL+pp++ +ina+lnl++e+ ++ ++lfp+s   ++  ++++ +++ld +l+++    ++  +le+++tpl+llL kl   a + +
  KHJ32411.1 214 VLLLNGLPISENSPLEPPTSLVINAILNLDFEKTDS-SILFPTS---SPDVLINHCVKILDLSLKNYG---EE--DLEQNVTPLILLLQKLNDLApQVI 303
                 *******************************98877.5899*99...999**************8877...44..49****************998999 PP

        Ric8 298 RkylrerlLPplrDrskrlekgdtlrgrllRlmtsvstprlkdavaelLFvLckedasrlvkyvGYGnaAGfLankgllsaqpeyssdsedsdteeykq 396
                 ++ l++ lLP+l+Dr++ l++ ++ ++rllRl+++++tp+l+++v++lLF+L+ +da +l++++GYG+a+Gf  + +                      
  KHJ32411.1 304 QAQLQQLLLPSLEDRQQILGRAESTPSRLLRLLSNPMTPKLRESVSNLLFELSGKDAGKLIHNIGYGFASGFIWHSDQNLV------------------ 384
                 ************************************************************************999877774.................. PP

        Ric8 397 akraiNPiTGqveeeeeenpleeMTeeEKErEAerLfvlfdrlektgviqvenPvekagedGr 459
                   ++iNP+TGq+ eeee+  +++MT+eEKErEAe+Lfvlf+rl+k+gvi+v+nP+e   ++G+
  KHJ32411.1 385 --NEINPVTGQLLEEEEKINIKDMTDEEKEREAEKLFVLFERLKKNGVISVKNPMELYQNSGK 445
                 ..47*************9999************************************999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3464.27
//
Query:       KHJ32412.1  [L=137]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        1.2    9.3   7.0        4.2    7.6   0.5    2.4  2  Jiv90     Cleavage inducing molecular chaperone
        1.3    9.5   6.6        9.5    6.6   0.5    2.4  2  eIF3g     Eukaryotic translation initiation factor 3 subunit 


Domain annotation for each model (and alignments):
>> Jiv90  Cleavage inducing molecular chaperone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.5   0.00047       4.2      17      40 ..      21      44 ..      18      48 .. 0.86
   2 ?    4.5   2.5    0.0044        39       7      38 ..      48      79 ..      43     125 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00047
       Jiv90 17 iaversksaaRfckeCkelhsake 40
                i+++++k+   fck+C+ +h++k+
  KHJ32412.1 21 IMIHKKKKPLEFCKRCNGHHPSKN 44
                56778888899**********997 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0044
       Jiv90  7 CtkCgkkHkriaversksaaRfckeCkelhsa 38
                  +Cg+    +++e  + aa  c++C   h +
  KHJ32412.1 48 APSCGNYGSTMHTEDICMAATKCRNCGGPHRS 79
                55799999999999999999999999988865 PP

>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.5    0.0011       9.5     100     119 ..      26      45 ..      16      49 .. 0.81
   2 ?    5.7   0.9    0.0021        19     104     114 ..      67      77 ..      53      88 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0011
       eIF3g 100 kekklvkCriCkgdHfTskC 119
                 k+k l  C+ C+g+H + +C
  KHJ32412.1  26 KKKPLEFCKRCNGHHPSKNC 45 
                 4566789**********999 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0021
       eIF3g 104 lvkCriCkgdH 114
                 + kCr+C+g H
  KHJ32412.1  67 ATKCRNCGGPH 77 
                 479******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       675  (0.0376485); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.36
# Mc/sec: 1125.36
//
Query:       KHJ32413.1  [L=425]
Description: putative pap2 superfamily protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1821  (0.101567); expected 358.6 (0.02)
Passed bias filter:                      627  (0.0349713); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 2980.50
//
Query:       KHJ32414.1  [L=273]
Description: putative extracellular serine-rich protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
          1   10.1   9.7       0.14   12.9   0.8    2.6  2  Auxin_repressed  Dormancy/auxin associated protein


Domain annotation for each model (and alignments):
>> Auxin_repressed  Dormancy/auxin associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.8   7.8e-06      0.14      39      87 ..      21      65 ..       9      76 .. 0.78
   2 ?    1.2   2.5     0.032   5.8e+02      28      65 ..     169     207 ..     139     255 .. 0.57

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 7.8e-06
  Auxin_repressed 39 skyqrslsmpasagtpstPvtPtassptsarkdnvWrsvfhPGsnlatk 87
                     +  q+ ++ +as++tps+P t +++sp    k  v   v + G+n atk
       KHJ32414.1 21 KGNQKNVTSAASTSTPSAPSTSGSASP----KGQVKVHVVRVGANAATK 65
                     456777888888888888888887777....777888888899999998 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.032
  Auxin_repressed  28 ikklgegessdskyq.rslsmpasagtpstPvtPtassp 65 
                      +++  + +++  ++q +  + p++ ++ +tPv+P  + p
       KHJ32414.1 169 LENFSALAAKAVTVQmKGDAGPGTGTNAGTPVSPDGNIP 207
                      233222233222222133444788888888888884443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       565  (0.0315132); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2073.43
//
Query:       KHJ32415.1  [L=2013]
Description: putative tpr mlp1 mlp2-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.4e-37  126.7  21.8    5.4e-37  126.7  21.8   19.6 18  TPR_MLP1_2      TPR/MLP1/MLP2-like protein
     0.0064   16.5  15.7     0.0064   16.5  15.7   18.0 16  CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein C


Domain annotation for each model (and alignments):
>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.0  23.0    0.0056        50      12     127 ..      58     176 ..      51     178 .. 0.88
   2 ?   -0.2  21.4      0.11   9.7e+02       6     125 ..     122     234 ..     115     244 .. 0.49
   3 ?   -4.8  22.8         2   1.8e+04      47     118 ..     229     300 ..     193     305 .. 0.62
   4 ?   -3.1  18.8      0.84   7.5e+03      11     115 ..     250     358 ..     247     361 .. 0.70
   5 !    7.0   3.7   0.00064       5.7      53     117 ..     407     474 ..     400     480 .. 0.88
   6 ?   -1.1   2.2       0.2   1.8e+03      63      87 ..     487     511 ..     467     539 .. 0.55
   7 ?    0.5   8.2     0.066   5.9e+02      23      83 ..     568     633 ..     552     647 .. 0.62
   8 !    4.3  17.6    0.0043        39       4     109 ..     708     809 ..     705     825 .. 0.82
   9 ?  -16.8  29.6         2   1.8e+04       3     114 ..     756     874 ..     754     902 .. 0.51
  10 ?   -6.7  21.5         2   1.8e+04       5     113 ..     831     940 ..     825     944 .. 0.59
  11 ?    2.4  11.6     0.017   1.6e+02      53     117 ..     971    1035 ..     948    1059 .. 0.50
  12 !  126.7  21.8     6e-41   5.4e-37       2     128 ..    1068    1194 ..    1067    1195 .. 0.98
  13 ?   -4.0  13.1       1.6   1.4e+04      41     114 ..    1281    1353 ..    1238    1370 .. 0.48
  14 ?    2.0   9.0     0.022     2e+02       3     108 ..    1337    1439 ..    1335    1448 .. 0.80
  15 ?    2.7   9.5     0.014   1.2e+02       6      73 ..    1443    1510 ..    1438    1518 .. 0.82
  16 !    4.3   1.0    0.0043        39      56      93 ..    1537    1574 ..    1533    1585 .. 0.79
  17 ?   -9.1  19.0         2   1.8e+04      15      97 ..    1618    1696 ..    1610    1718 .. 0.65
  18 ?    1.2   5.3     0.041   3.6e+02      59     112 ..    1766    1819 ..    1724    1833 .. 0.68

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0056
  TPR_MLP1_2  12 slkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeq...keelekelse 107
                 +l++   ++e+++++l+e+lek ++ ++e   k  +e    ++   elq+l++ +++ ++ i++l+a+  +++a++    + +e++    + l ++l++
  KHJ32415.1  58 ELENVVRNSETRVESLRENLEKAQKTVEELRAKLNEEEKTRSSLESELQNLKTSSATSTNVIETLRARISTLEAANRDTLAVIETKnknNDDLANQLQS 156
                 577888999**********************************************************9988888887777666655111567999999* PP

  TPR_MLP1_2 108 lekriedlneqNklLhdQlE 127
                   ++  +l++q ++Lh+  +
  KHJ32415.1 157 KHQKSLELTQQISTLHQEVQ 176
                 *****************887 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.11
  TPR_MLP1_2   6 leeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeeleke 104
                 l++ i++l++ + +    l+ ++++ ++  ++a++ q       +k  e ++++++l +e++++k+ ++++  +  + k+ele ++++ e  ++el+++
  KHJ32415.1 122 LRARISTLEAANRDT---LAVIETKNKNNDDLANQLQS----KHQKSLELTQQISTLHQEVQTAKNMVSSASFREGAIKQELELAKKNNEWLESELKNK 213
                 344444444443333...33344444444444444444....555555666666666666666666666666666666666666666666666666666 PP

  TPR_MLP1_2 105 lselekriedlneqNklLhdQ 125
                 ++++ k +++  +q + L  Q
  KHJ32415.1 214 VADAMKYRKEKGTQVAELQRQ 234
                 655555555444443333333 PP

  == domain 3  score: -4.8 bits;  conditional E-value: 2
  TPR_MLP1_2  47 relvkha.edvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekriedlneq 118
                  el+ ++ e + +l+a ++  + l++++ el++ ae+  +++++ +e  ++ ++ +++el++  +r+ dl++q
  KHJ32415.1 229 AELQRQNeEIASSLEANKKTNQALRNRVDELQKIAEDSLSKIQQLQEDAANVENGFRQELDS-SRRLADLQSQ 300
                 24444440445678888888888888888888888888888888888888888888888865.5688888888 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 0.84
  TPR_MLP1_2  11 kslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhae....dvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekel 105
                 ++l+++ +e+++ ++   +++++ +e a++ ++ + +el         ++++ q+ r++l e++a i+++k++a +    + ++ es  + +e  e+++
  KHJ32415.1 250 QALRNRVDELQKIAEDSLSKIQQLQEDAANVENGFRQELDSSRRladlQSQQTQTHRNRLLEVEASIEKIKESAAEEAGRCRAEVESERRDRELAEQRI 348
                 556666666666666666666666666666666666666554431111457888889999999999999999999998999999999999999999999 PP

  TPR_MLP1_2 106 selekriedl 115
                 +ele  i+ l
  KHJ32415.1 349 TELELDIDRL 358
                 9998877766 PP

  == domain 5  score: 7.0 bits;  conditional E-value: 0.00064
  TPR_MLP1_2  53 aedvkelqalreelnelkaeiaelkaeaesakaeleese...esweeqkeelekelselekriedlne 117
                  + v+el  +r el++ + + a+l+a+ ++  + le+++    ++e + ++leke+ e+ k  + +++
  KHJ32415.1 407 TQVVEELGMVRIELKKERLRSASLEAQIDQMVEGLEAKKpyvDELELENKRLEKEVVEISKYADQIEK 474
                 67899*********************************95556888899*********9998887766 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 0.2
  TPR_MLP1_2  63 reelnelkaeiaelkaeaesakael 87 
                 ++e+++++ae++ l++++ ++++++
  KHJ32415.1 487 KTESSTARAEAKILNQQLRDLSSQI 511
                 4444444444444444444443333 PP

  == domain 7  score: 0.5 bits;  conditional E-value: 0.066
  TPR_MLP1_2  23 klqklqedlekqaeiakeaqqkYere..l...vkhaedvkelqalreelnelkaeiaelkaeaesa 83 
                 ++++lqe+ ++q +i ++   + e+e  l   +k a+d +e+q+l ++++++k+e+++l a+ es 
  KHJ32415.1 568 NISELQEKNQEQLKIIRQLGAQMESEeaLaakNKAAQDHEEVQRLQAKVESYKDELKSLIARSESY 633
                 566777777777777776555554441121112345556666666677777777776666666654 PP

  == domain 8  score: 4.3 bits;  conditional E-value: 0.0043
  TPR_MLP1_2   4 ksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeele 102
                 k+l+e++++l++ek+e++a+++k++++l+  +++    + +Y    ++++e  k  q l e +++   + +++ +++ +ak  le  +++     ++l+
  KHJ32415.1 708 KTLREQVARLSQEKSELQAQISKIKSQLTLATDRFDLLNSNYTMLSNENKELQKRTQILSETAAKQDMRTQQVAEDLIEAKGLLESMRNEN----SNLK 802
                 789*************************************************************************999999998644433....3333 PP

  TPR_MLP1_2 103 kelsele 109
                  e++  +
  KHJ32415.1 803 AEKKLWK 809
                 3333333 PP

  == domain 9  score: -16.8 bits;  conditional E-value: 2
  TPR_MLP1_2   3 lksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqa.lreelnelkae...iaelkaeaesakaeleesees.... 93 
                  k+l++  + l+e +++++ + q++ edl + + +++ + +   + l   ++ +k++q+ l  + ++l +e   +++l ++ +++++e e se++    
  KHJ32415.1 756 NKELQKRTQILSETAAKQDMRTQQVAEDLIEAKGLLESMRNE-NSNLKAEKKLWKDIQDrLSHDNESLMSErtrLNTLITNQQTLQNERELSESEirrr 853
                 567777777777777777777777777776666555554442.22333344444444422333444333330003333333444333333333321111 PP

  TPR_MLP1_2  94 weeqkeelekelselekried 114
                 +++q e+le+el+ +++++ d
  KHJ32415.1 854 LQSQIESLESELNITKRKLSD 874
                 233444444444444444444 PP

  == domain 10  score: -6.7 bits;  conditional E-value: 2
  TPR_MLP1_2   5 sleeeikslkeekeeaeaklq.klqedlekqaeiakeaqqkYerelvkhaedvkelqalreel..nelkaeiaelkaeaesakael...eeseesweeq 97 
                 +l +++++l++e e +e++++  lq+++e+ +++++  ++k + el    ed k+ ++lr+e+  ++ ++++ +l +++  a++el   ++s+ +++++
  KHJ32415.1 831 TLITNQQTLQNERELSESEIRrRLQSQIESLESELNITKRKLSDEL----EDNKK-TQLRKEYdsQQNQKRVDNLASSLSHAREELiavKTSRDHLQTR 924
                 4445555555555555555431344445555555555554444444....44333.4677777557777888888888888888763335566667788 PP

  TPR_MLP1_2  98 keelekelselekrie 113
                  +el  el+++e+r++
  KHJ32415.1 925 VQELTIELKSSEERVK 940
                 8888888888888876 PP

  == domain 11  score: 2.4 bits;  conditional E-value: 0.017
  TPR_MLP1_2   53 aedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekriedlne 117 
                  +e  ++l  +++el++++ +++++k+ a+++++e+e   +  ++ +ee+++ ++  +++i +l++
  KHJ32415.1  971 SELKRDLDLAKSELENARYQMEKFKSIAQTTEEEIESLNSTSDQFREEMDRVIEGRNTKIRELEQ 1035
                  33334444444444444444444444444444444444444444444444444444444444433 PP

  == domain 12  score: 126.7 bits;  conditional E-value: 6e-41
  TPR_MLP1_2    2 elksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqk 98  
                  e+ +le+ei++lk+e e++   +q +q+dl++qaeia++aqq+Ye+elvkhae++k+lq++r+eln lk+e  +lk++aes +a+l++se sw+e+ 
  KHJ32415.1 1068 EKIALEAEISRLKDEGERYLISAQFHQQDLRAQAEIATKAQQDYENELVKHAEAAKQLQNVRAELNMLKTESVSLKSDAESSRAALSQSEISWKERY 1164
                  67789******************************************************************************************** PP

  TPR_MLP1_2   99 eelekelselekriedlneqNklLhdQlEs 128 
                  e++e+el+el+ r++dln+qNk+L++QlE 
  KHJ32415.1 1165 ENFERELKELRDRRDDLNTQNKILYKQLED 1194
                  *****************************7 PP

  == domain 13  score: -4.0 bits;  conditional E-value: 1.6
  TPR_MLP1_2   41 aqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseeswee...qkeelekelselekried 114 
                   q ++    v h++ +++l+    eln  ++  ++l++e+ +++++l+e++   ee   + + le +++ele r e 
  KHJ32415.1 1281 SQADFGPSSVAHKDLMDKLN----ELNLFRESSTTLRNELRQTQSQLAEKTDRVEEllgKIQPLEARIRELEHRQET 1353
                  34444444444444444444....34455555555555555555555555554444111122233333333333332 PP

  == domain 14  score: 2.0 bits;  conditional E-value: 0.022
  TPR_MLP1_2    3 lksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaea...esakaeleeseeswee 96  
                  ++ le+ i +l+ ++e +e ++  l+ed    ++++++   kY r       d  ++++l+e +++l+++  +l +e    ++   e+++++  we+
  KHJ32415.1 1337 IQPLEARIRELEHRQETLEGEIILLKEDRDRWQKRTQDIISKYDRI------DPADMEKLKESVKSLQNKCDDLLEEKkimQEKAVEFQNEKIGWEK 1427
                  6779999************************************994......566677777777777777777766651115555678999999*** PP

  TPR_MLP1_2   97 qkeelekelsel 108 
                   k++l ++ ++ 
  KHJ32415.1 1428 VKQKLIDQAKDR 1439
                  ****99888765 PP

  == domain 15  score: 2.7 bits;  conditional E-value: 0.014
  TPR_MLP1_2    6 leeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaei 73  
                  l ++ik+ + e ++  ++  ++ ++ e  +++ ++ +q  e+ ++++++++++l++l++el+ +k e 
  KHJ32415.1 1443 LIKDIKDRTGERDAMIQERDAAIQEREIIQQQFSNLKQELETLVQEKSANLQQLSTLKQELELVKLEK 1510
                  566677777777777788888888888888888999999**********************9988775 PP

  == domain 16  score: 4.3 bits;  conditional E-value: 0.0043
  TPR_MLP1_2   56 vkelqalreelnelkaeiaelkaeaesakaeleesees 93  
                  ++e+++lr+el+++  e +++++e++ ++++le + + 
  KHJ32415.1 1537 IEEVSKLRQELQDTILEKQKIQDEVNYLREKLEFANSL 1574
                  78999999999999999999999988888888866654 PP

  == domain 17  score: -9.1 bits;  conditional E-value: 2
  TPR_MLP1_2   15 eekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreel.nelkaeiaelkaeaesakaeleeseesweeq 97  
                  ++ +++e+++++++ ++++ +++ak +++  e+ l   ++++++  al+++l ++ k++ ael+ae    k ++e+++++w  +
  KHJ32415.1 1618 SKRKALEEQVKAAEAKIKEFEDRAKIMEEEMESKLKRRSDTMRS--ALNKKLaESKKTQKAELEAE---FKMKFEQEKQNWLAE 1696
                  56677788888888888888888888888888888777777764..34333315555555666555...355666666666555 PP

  == domain 18  score: 1.2 bits;  conditional E-value: 0.041
  TPR_MLP1_2   59 lqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekri 112 
                  ++++  e++++k+e a++ a++++    ++++  s+e++k++l+ +++e + r+
  KHJ32415.1 1766 MSKVSVEIQKVKDEHAKILADVNQKADLVKAQAVSMETKKSALKINMTENRIRV 1819
                  466677777777777777777777777777777777777777776666655554 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5  15.7   7.1e-07    0.0064      19     115 ..      50     145 ..      36     150 .. 0.90
   2 !    9.0  25.5   0.00015       1.4       3     135 ..     145     277 ..     143     282 .. 0.94
   3 ?   -2.4   5.9      0.51   4.6e+03      35      78 ..     315     358 ..     281     364 .. 0.54
   4 ?    1.5   3.8     0.031   2.8e+02      63     109 ..     415     461 ..     404     471 .. 0.54
   5 !    5.7   8.4    0.0015        14      16      82 ..     452     518 ..     448     533 .. 0.87
   6 ?   -0.6   8.6      0.14   1.3e+03      34      96 ..     589     650 ..     570     701 .. 0.66
   7 ?   -4.8  15.6         2   1.8e+04      23     136 ..     686     796 ..     677     802 .. 0.79
   8 ?  -11.5  23.7         2   1.8e+04       5      97 ..     777     873 ..     748     880 .. 0.70
   9 !    7.2   0.9   0.00055       4.9       6      39 ..     905     938 ..     901     943 .. 0.92
  10 !   13.5  16.7   6.1e-06     0.055      24     112 ..     968    1057 ..     959    1084 .. 0.84
  11 !    5.8  11.4    0.0015        13      25     102 ..    1124    1205 ..    1104    1209 .. 0.74
  12 ?   -2.7   3.8       0.6   5.4e+03      36      83 ..    1236    1283 ..    1219    1304 .. 0.62
  13 !    5.7   8.2    0.0016        14      52     115 ..    1300    1364 ..    1288    1378 .. 0.78
  14 ?    0.1  14.3     0.084   7.5e+02      27      84 ..    1455    1512 ..    1425    1520 .. 0.74
  15 ?    0.3   1.3     0.072   6.4e+02       7      37 ..    1542    1572 ..    1533    1587 .. 0.45
  16 ?   -8.7  24.8         2   1.8e+04       2      77 ..    1617    1692 ..    1616    1769 .. 0.61

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 7.1e-07
  CENP-F_leu_zip  19 adsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlleek 113
                     ad+L+  +e Le  + +se   e++  + E+++++ve+l+++++e +++++ le++L++l+    + ++ +++ + r+s+Le++n ++  ++e k
      KHJ32415.1  50 ADKLRVDIE-LENVVRNSETRVESLRENLEKAQKTVEELRAKLNEEEKTRSSLESELQNLKTSSATSTNVIETLRARISTLEAANRDTLAVIETK 143
                     556665564.8999999***************************************************************************998 PP

  CENP-F_leu_zip 114 Eq 115
                      +
      KHJ32415.1 144 NK 145
                     76 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00015
  CENP-F_leu_zip   3 kkklhvlekLKeserkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervs 97 
                     k +  ++++L+   +k+  L +++  L +e++++++  +++       k+e+e  k++ e l++el++  +d  + r+ek +   elq ++e++ 
      KHJ32415.1 145 KNNDDLANQLQSKHQKSLELTQQISTLHQEVQTAKNMVSSASFREGAIKQELELAKKNNEWLESELKNKVADAMKYRKEKGTQVAELQRQNEEIA 239
                     55667899**************************************************************************************7 PP

  CENP-F_leu_zip  98 eLeslnsslenlleekEqekvqmkeeskaaveeLqtql 135
                     +  ++n ++++ l++  +e  ++ e+s +++++Lq + 
      KHJ32415.1 240 SSLEANKKTNQALRNRVDELQKIAEDSLSKIQQLQEDA 277
                     766679999**************************876 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 0.51
  CENP-F_leu_zip  35 mseenqekvileaEtskaevetlkeeieelaeelreleldLval 78 
                      +e+ +e++  ea   +aeve+ +   e  +++ +eleld++ l
      KHJ32415.1 315 SIEKIKESAAEEAGRCRAEVESERRDRELAEQRITELELDIDRL 358
                     23444555555666666666665555555555555666555544 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.031
  CENP-F_leu_zip  63 elaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenl 109
                     + + el++ +l  ++l  + +++ + l+ k+  v+eLe  n  le+ 
      KHJ32415.1 415 MVRIELKKERLRSASLEAQIDQMVEGLEAKKPYVDELELENKRLEKE 461
                     44444555555555555555555555555555555555555555543 PP

  == domain 5  score: 5.7 bits;  conditional E-value: 0.0015
  CENP-F_leu_zip  16 erkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsek 82 
                     e ++  L+  v ++ +   ++e+++e++i +   sk e +t ++e + l+++lr+l+++++ l  ++
      KHJ32415.1 452 ELENKRLEKEVVEISKYADQIEKERENAIKDSRISKTESSTARAEAKILNQQLRDLSSQIKFLLADQ 518
                     667888999999999999****************************************998776555 PP

  == domain 6  score: -0.6 bits;  conditional E-value: 0.14
  CENP-F_leu_zip  34 emseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqerv 96 
                     +m  e+  +++  a +  +ev+ l++++e  + el+ l +  ++  +e++   ++lq+   ++
      KHJ32415.1 589 QMESEEALAAKNKAAQDHEEVQRLQAKVESYKDELKSLIARSESYIKERDMFRRMLQHR-GQI 650
                     3334444456667788899*******************************999999864.444 PP

  == domain 7  score: -4.8 bits;  conditional E-value: 2
  CENP-F_leu_zip  23 kdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenlleekEqek 117
                        + nL+++  +    +e+ +++  t +++v  l +e+ el+++ ++++++L+  +   + L+ +     ++ +eL+++   l+++  ++ +  
      KHJ32415.1 686 SMAIRNLQSQYDQY---REEQTIDRKTLREQVARLSQEKSELQAQISKIKSQLTLATDRFDLLNSNYTMLSNENKELQKRTQILSETAAKQDMRT 777
                     55566666655544...555678999999999999999999999999999999999999999999999999999999999999998888888888 PP

  CENP-F_leu_zip 118 vqmkeeskaaveeLqtqlk 136
                      q+ e+  +a  +L++  +
      KHJ32415.1 778 QQVAEDLIEAKGLLESMRN 796
                     8888887777777666555 PP

  == domain 8  score: -11.5 bits;  conditional E-value: 2
  CENP-F_leu_zip   5 klhvlekLKeserkadsLkdkvenLerelemseenqekvileaEt...skaevetlkeeieelaeelreleldLv.alrsekeeLekelqkkqer 95 
                      ++v+e L e++   +s+++   nL++e++  +  q+++  + E+   ++  ++tl ++ ++l++e++  e+++   l+s+ e+Le el+  +++
      KHJ32415.1 777 TQQVAEDLIEAKGLLESMRNENSNLKAEKKLWKDIQDRLSHDNESlmsERTRLNTLITNQQTLQNERELSESEIRrRLQSQIESLESELNITKRK 871
                     56777777777777777777777777777777777777777777522256666667777777777777777777525777777777777777777 PP

  CENP-F_leu_zip  96 vs 97 
                      s
      KHJ32415.1 872 LS 873
                     65 PP

  == domain 9  score: 7.2 bits;  conditional E-value: 0.00055
  CENP-F_leu_zip   6 lhvlekLKeserkadsLkdkvenLerelemseen 39 
                      h++e+L +++ + d+L+ +v++L  el+ see 
      KHJ32415.1 905 SHAREELIAVKTSRDHLQTRVQELTIELKSSEER 938
                     6999**************************9985 PP

  == domain 10  score: 13.5 bits;  conditional E-value: 6.1e-06
  CENP-F_leu_zip   24 dkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervs.eLeslnsslenllee 112 
                        v +L+r+l  +++++e++  ++E+ k  ++t +eeie l+++  +++ +++ + + +++  +el++  e +s eL ++n +l+nl ++
      KHJ32415.1  968 IEVSELKRDLDLAKSELENARYQMEKFKSIAQTTEEEIESLNSTSDQFREEMDRVIEGRNTKIRELEQRAEDIStELTNTNNELTNLRNQ 1057
                      46999*******************************************************999**********86899999999987444 PP

  == domain 11  score: 5.8 bits;  conditional E-value: 0.0015
  CENP-F_leu_zip   25 kvenLerelemseenqekvileaEtskaevet....lkeeieelaeelreleldLvalrsekeeLekelqkkqervseLesl 102 
                      + +n  +el+m++ +  +++ +aE+s+a++++     ke  e+ ++el+el+   ++l  +++ L k+l++ +++v +L+++
      KHJ32415.1 1124 QLQNVRAELNMLKTESVSLKSDAESSRAALSQseisWKERYENFERELKELRDRRDDLNTQNKILYKQLEDINSQVLSLQQS 1205
                      4567899**********************99855556677777777777777777777777777777777777777777665 PP

  == domain 12  score: -2.7 bits;  conditional E-value: 0.6
  CENP-F_leu_zip   36 seenqekvileaEtskaevetlkeeieelaeelreleldLvalrseke 83  
                      + +++e ++++ E + +e + l +++e  +++l e +l+L++ r+ + 
      KHJ32415.1 1236 LRREKEIIEVQYELKCQETKRLCQKLEYAQSQLDETRLKLDQERRSQA 1283
                      445666666777777777777777777777777777777766665544 PP

  == domain 13  score: 5.7 bits;  conditional E-value: 0.0016
  CENP-F_leu_zip   52 aevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLeslnsslenll.eekEq 115 
                      +e++ ++e   +l++elr+ +++L++ +   eeL  ++q    r+ eLe ++++le  +   kE+
      KHJ32415.1 1300 NELNLFRESSTTLRNELRQTQSQLAEKTDRVEELLGKIQPLEARIRELEHRQETLEGEIiLLKED 1364
                      56666778888999999999999999999999999999999999999999999998644033443 PP

  == domain 14  score: 0.1 bits;  conditional E-value: 0.084
  CENP-F_leu_zip   27 enLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekee 84  
                      +++ +e   + +++e +  +  + k+e+etl +e+    ++l+ l+++L+ ++ eke+
      KHJ32415.1 1455 DAMIQERDAAIQEREIIQQQFSNLKQELETLVQEKSANLQQLSTLKQELELVKLEKEK 1512
                      4566777777788888999999999999999999999999999999998888888875 PP

  == domain 15  score: 0.3 bits;  conditional E-value: 0.072
  CENP-F_leu_zip    7 hvlekLKeserkadsLkdkvenLerelemse 37  
                      +++++L+ +  ++ +++d v+ L   le ++
      KHJ32415.1 1542 KLRQELQDTILEKQKIQDEVNYLREKLEFAN 1572
                      2233333333333333333333333333333 PP

  == domain 16  score: -8.7 bits;  conditional E-value: 2
  CENP-F_leu_zip    2 ekkklhvlekLKeserkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelr.eleldLva 77  
                      e k++ ++e+ K++e k   ++d+++ +e e+e   + ++++++ a ++ + +e+ k+++ el++e + ++e++ ++
      KHJ32415.1 1617 ESKRKALEEQVKAAEAKIKEFEDRAKIMEEEMESKLKRRSDTMRSALNK-KLAESKKTQKAELEAEFKmKFEQEKQN 1692
                      679999***************************9999888888777553.345555666666655543234443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2013 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3668  (0.204585); expected 358.6 (0.02)
Passed bias filter:                      604  (0.0336884); expected 358.6 (0.02)
Passed Vit filter:                       248  (0.0138323); expected 17.9 (0.001)
Passed Fwd filter:                       118  (0.00658152); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 5.33u 0.40s 00:00:05.73 Elapsed: 00:00:01.05
# Mc/sec: 5797.53
//
Query:       KHJ32416.1  [L=310]
Description: hypothetical protein EV44_g6045 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.6e-16   58.0   4.2    1.5e-15   57.3   0.1    3.0  3  CENP-X    CENP-S associating Centromere protein X


Domain annotation for each model (and alignments):
>> CENP-X  CENP-S associating Centromere protein X
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.3     0.083   1.5e+03      41      63 ..     117     144 ..     115     147 .. 0.70
   2 ?   -0.0   0.0     0.062   1.1e+03       2      17 ..     220     236 ..     219     241 .. 0.80
   3 !   57.3   0.1   8.2e-20   1.5e-15      14      75 .]     253     310 .]     248     310 .] 0.88

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.083
                 HHHHHHHHTT-SE..........EECHH CS
      CENP-X  41 Raaeeaeeegkeeseksk.....leved 63 
                 R+ +  e+e+ e s++++     le++ 
  KHJ32416.1 117 RSLIDSEAEEGESSDQEDefmkdLEIDE 144
                 7777777777777776666777777765 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.062
                 HHHHHHHCCC-SS.TT- CS
      CENP-X   2 ellarlLqesfkd.ekt 17 
                 +ll+ lL+e fk+ ++t
  KHJ32416.1 220 DLLSVLLHEMFKStDDT 236
                 68999****99984555 PP

  == domain 3  score: 57.3 bits;  conditional E-value: 8.2e-20
                 STT-EE-CCCHHHHHHHHHHHHHHHHHHHHHHHHHTT-SE.....EECHHHHHHCHCHHCHC CS
      CENP-X  14 dektkItkdalelvaeylklFvrEavaRaaeeaeeegkeeseksklevedLekiapqLlLDf 75 
                 + ++++tk+a+++v +yl++Fv+Ea+aRaa e  e+g        levedLe+ apqL+LDf
  KHJ32416.1 253 KGQIRMTKQAVDAVGKYLDTFVKEAIARAACESLERGGI----GVLEVEDLERLAPQLILDF 310
                 5679***************************66665543....35****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1058  (0.0590105); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.21s 00:00:00.70 Elapsed: 00:00:00.37
# Mc/sec: 2498.02
//
Query:       KHJ32417.1  [L=314]
Description: putative transcription initiation factor iie subunit beta [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.9e-24   84.5   0.2    6.4e-24   83.4   0.2    1.6  1  TFA2_Winged_2  TFA2 Winged helix domain 2
    5.8e-17   61.7   1.2    1.6e-16   60.3   0.4    2.2  2  TFIIE_beta     TFIIE beta subunit core domain


Domain annotation for each model (and alignments):
>> TFA2_Winged_2  TFA2 Winged helix domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.4   0.2   7.1e-28   6.4e-24       1      61 []     149     209 ..     149     209 .. 0.98

  Alignments for each domain:
  == domain 1  score: 83.4 bits;  conditional E-value: 7.1e-28
  TFA2_Winged_2   1 rnkeeLlalLkkrpkaeGikvkdLkdswpdveealeeLeaegeilvlrtkkdgqpkiVfwN 61 
                    r+ ++Ll++L+k p+a+G++vkdLkd+wpd++ a+++Le+e++ilv+rtkkd++ ++V+ +
     KHJ32417.1 149 RTEDDLLRYLQKMPNAQGVSVKDLKDGWPDCDSAIDKLEKEHRILVTRTKKDNHARMVWSD 209
                    7899*******************************************************76 PP

>> TFIIE_beta  TFIIE beta subunit core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.3   0.4   1.8e-20   1.6e-16       2      68 .]      73     148 ..      72     148 .. 0.94
   2 ?   -1.2   0.0      0.28   2.5e+03      11      26 ..     157     174 ..     152     215 .. 0.57

  Alignments for each domain:
  == domain 1  score: 60.3 bits;  conditional E-value: 1.8e-20
  TFIIE_beta   2 ftqLakiveylKkkdgplsleeIlsylslqldls.dknwllleaLknnpkiey..Dpk.......kgkfsfkPlyni 68 
                 ftq+++++e+lKkkd+p++++eIl yls q++ +  k++l++++Lk+++++++  Dp+       +g f++ P+ n+
  KHJ32417.1  73 FTQVTYVIEFLKKKDEPKKFQEILLYLS-QVNADeRKKRLIAKILKQHDRVKWtpDPNlkiqtwdSGLFEHCPIINV 148
                 9***************************.89888899****************7777799***999*******9997 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.28
  TFIIE_beta  11 ylKk..kdgplsleeIls 26 
                 yl+k  + + +s++++ +
  KHJ32417.1 157 YLQKmpNAQGVSVKDLKD 174
                 555543333555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1519  (0.0847231); expected 358.6 (0.02)
Passed bias filter:                      630  (0.0351386); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2318.68
//
Query:       KHJ32418.1  [L=282]
Description: hypothetical protein EV44_g5456 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-06   27.1   1.6    1.8e-05   24.7   1.6    2.3  1  DUF2256   Uncharacterized protein conserved in bacteria (DUF2


Domain annotation for each model (and alignments):
>> DUF2256  Uncharacterized protein conserved in bacteria (DUF2256)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   1.6     1e-09   1.8e-05      10      40 .]      29      62 ..      27      62 .. 0.84

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 1e-09
     DUF2256 10 CavCgrpftwRkkWekdWd...eVkyCSerCrrn 40
                C +Cgr +t Rk      +    VkyCS+rCrrn
  KHJ32418.1 29 CHTCGRVITPRKGHTTAHNippPVKYCSDRCRRN 62
                ************99965543338*********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1067  (0.0595125); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2035.51
//
Query:       KHJ32419.1  [L=162]
Description: hypothetical protein EV44_g4685 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1164.93
//
Query:       KHJ32420.1  [L=855]
Description: putative pre-mrna-splicing factor 38b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (855 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1595  (0.088962); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                        28  (0.00156172); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.11u 0.33s 00:00:01.44 Elapsed: 00:00:00.48
# Mc/sec: 5402.04
//
Query:       KHJ32421.1  [L=512]
Description: putative transcriptional regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0091   15.4   0.3      0.018   14.4   0.3    1.6  1  Foamy_BEL  Foamy virus BEL 1/2 protein
  ------ inclusion threshold ------
       0.26   11.2   6.4       0.33   10.9   0.2    3.5  3  DEK_C      DEK C terminal domain


Domain annotation for each model (and alignments):
>> Foamy_BEL  Foamy virus BEL 1/2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.3   2.1e-06     0.018       7      68 ..     307     367 ..     299     419 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.1e-06
   Foamy_BEL   7 dlviaeepeenprrprrytkrdvkcvsyhaykeledkhphhiklqdwipkpeemvaqkvqnq 68 
                  +vi eep e  rr ++ +k ++   + +  ke +    h +k +d i   eem  +k+q+q
  KHJ32421.1 307 SIVIDEEPLEKKRRKKKGSKEEIIK-AGKLKKEGNKASSHSLKKNDKIASLEEMTLKKLQSQ 367
                 3699****************99854.4567899999999********************998 PP

>> DEK_C  DEK C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   3.6e-05      0.33      16      35 ..      23      42 ..      11      47 .. 0.88
   2 ?    0.6   0.2      0.06   5.4e+02       2      18 ..      58      74 ..      57      83 .. 0.78
   3 ?    0.6   0.1     0.063   5.6e+02      17      31 ..     354     368 ..     352     371 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 3.6e-05
       DEK_C 16 eaDLdtvTkkkvReqLeekl 35
                +aD d +T k+vR q+ee l
  KHJ32421.1 23 SADRDHLTVKSVRDQVEEDL 42
                79****************98 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.06
       DEK_C  2 sdeeirkaireiLreaD 18
                s++ i+k+++++L +  
  KHJ32421.1 58 SKSIIEKTVQQLLETEE 74
                78889*******99875 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.063
       DEK_C  17 aDLdtvTkkkvReqL 31 
                 a L+++T kk   qL
  KHJ32421.1 354 ASLEEMTLKKLQSQL 368
                 579*******99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2081  (0.116069); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.30s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 3263.58
//
Query:       KHJ32422.1  [L=219]
Description: hypothetical protein EV44_g3441 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-19   69.4   0.0    4.5e-19   68.8   0.0    1.2  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.8   0.0   2.5e-23   4.5e-19       2     218 ..      29     185 ..      28     199 .. 0.94

  Alignments for each domain:
  == domain 1  score: 68.8 bits;  conditional E-value: 2.5e-23
                 E-TT.S-EEE.......-THHHHCTB--.........-------HHHH.............HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET. CS
       RVT_1   2 pKkgpgsyRp.isllsvdykalnkliakrLkdvlekllsenqpgfrpgrstldavedllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvpt 99 
                 +K++ g+ R+ +     dy+ ln+ ++          + +++p f++              l+   ka++++klD+k+aF++ +    ++ +taf+++ 
  KHJ32422.1  29 KKPN-GGLRLcV-----DYRGLNATTIP---------DLNPLPIFKKT-------------LRLLSKARWFTKLDVKSAFHRLRIWVGDEWMTAFRCR- 98 
                 6777.*****55.....***********.........99*********.............8999*********************************. PP

                 ........................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESS.HHHHHHHHHHHHHHHHHTT-- CS
       RVT_1 100 klinliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililsks.keelqelleaveewlkesglk 197
                                          g++e+ ++p+G++++P   ++++ne lre       +  ++Y+DD+l ++++ ++e+ e +  + +++ ++gl 
  KHJ32422.1  99 ------------------------LGLFEWLVTPFGLINAPPNVQRYINEQLREHLD----IDATAYMDDVLAYTSGsENEHWETVCQILRKFDKAGLF 169
                 ........................79***************************9998....9***************8888****************** PP

                 BEGGG-EEE.....ESSEEET CS
       RVT_1 198 inpeKtklvlftvkseevkyL 218
                 +  + + ++      +evky 
  KHJ32422.1 170 LDLDTCNFL-----CKEVKYV 185
                 *********.....5888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       376  (0.0209716); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1613.69
//
Query:       KHJ32423.1  [L=119]
Description: hypothetical protein EV44_g0406 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1807  (0.100786); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                       152  (0.00847788); expected 17.9 (0.001)
Passed Fwd filter:                        79  (0.00440627); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.87u 0.29s 00:00:01.15 Elapsed: 00:00:00.43
# Mc/sec: 826.08
//
Query:       KHJ32424.1  [L=304]
Description: putative cytochrome c heme lyase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     7e-114  380.3   0.1   8.1e-114  380.1   0.1    1.0  1  Cyto_heme_lyase  Cytochrome c/c1 heme lyase


Domain annotation for each model (and alignments):
>> Cyto_heme_lyase  Cytochrome c/c1 heme lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  380.1   0.1  4.5e-118  8.1e-114       1     292 []       1     286 [.       1     286 [. 0.88

  Alignments for each domain:
  == domain 1  score: 380.1 bits;  conditional E-value: 4.5e-118
  Cyto_heme_lyase   1 mgwfwadsaksaasasks.....asskasspseCPmhkkkkskkkkaaseaaakekkkesasacpvkeeeeseeeeeksalsklnplnympsel 89 
                      mgwfwads+ +  s +++     ++s+ ++p++CPmh +kk++++         +++ +    +p+  +++++ +++ ++ s  nplny+++el
       KHJ32424.1   1 MGWFWADSNYTLRSPRTTwnglsEDSQLAPPPGCPMHLSKKEAQS---------KNEVDVVIDTPI--STSRSGNNAGTKYSVYNPLNYIFNEL 83 
                      9*******544444443366787889999********44433332.........334455567788..33445556666799************ PP

  Cyto_heme_lyase  90 sqerapeqkvdLpteReissiPkgdeeglWeYPspqqmynAmlrKGyedipedavesmvavHnflnEgaWeeileWEkkfakglakgwkkckrg 183
                      sq  a++q+++LpteRe ssiPk+++eg+WeYPspqqmynA+lrKG++d++ +avesmv+vHnflnEgaW+ei+eWE+ f +gl+kgw++c++g
       KHJ32424.1  84 SQLPAKNQTIKLPTERESSSIPKSTGEGNWEYPSPQQMYNALLRKGFTDTDVTAVESMVNVHNFLNEGAWAEIVEWERLFGRGLKKGWEICMNG 177
                      ********************************************************************************************** PP

  Cyto_heme_lyase 184 eekveeelekee..ePkLlrFqGrpkelsPkarllqllgklfPskfstelPFDRHDWlvlRkteeeekkevrYviDyYsgpdeetGepvfllDv 275
                      e++ + + + +e  +P+Ll F+Grp++++Pka++lqllgk++P+ f+te+PFDRHDW+v+R+++ + +k++rYviDyYsgpd ++Ge+vf+lDv
       KHJ32424.1 178 EKERNLMEDDKEisQPSLLSFMGRPEDMTPKAAILQLLGKVYPAGFGTEPPFDRHDWIVKRENNGK-SKQIRYVIDYYSGPDGPNGESVFYLDV 270
                      99876655555567************************************************7766.9************************** PP

  Cyto_heme_lyase 276 RPaldsltaaadRlvrw 292
                      RPa+ ++ aa++R++rw
       KHJ32424.1 271 RPAI-TPLAAIERIMRW 286
                      ****.999999*****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2319.49
//
Query:       KHJ32425.1  [L=323]
Description: hypothetical protein EV44_g5448 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 2708.26
//
Query:       KHJ32426.1  [L=903]
Description: putative sterol regulatory element binding protein sre1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-98  328.8   0.3    2.2e-98  328.8   0.3    2.0  2  DUF2014   Domain of unknown function (DUF2014)
    2.6e-16   59.3   0.6      6e-16   58.1   0.6    1.7  1  HLH       Helix-loop-helix DNA-binding domain


Domain annotation for each model (and alignments):
>> DUF2014  Domain of unknown function (DUF2014)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.2     0.068   6.1e+02     132     177 ..     148     191 ..     115     199 .. 0.68
   2 !  328.8   0.3  2.5e-102   2.2e-98       1     262 [.     488     749 ..     488     750 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.068
                 XXXXXXIIIITTTTGGGXXXXXXXGG..GGGHHHH.HXXXXXXSGG CS
     DUF2014 132 hlaaLleqdcddVlsddvvqraynLafnrpttenveeedegldsvv 177
                  +a+ le d dd l++ v + a+n++ ++  ++n +++ ++l  +v
  KHJ32426.1 148 SIAE-LEDDEDDDLNPLVKKTAHNMI-EKRYRTNLNDKIAALRDAV 191
                 4444.57788999************9.6766777766666665555 PP

  == domain 2  score: 328.8 bits;  conditional E-value: 2.5e-102
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX........XXXXXXXXX CS
     DUF2014   1 kllklslrnliGvegyslltglteeqeaarvkaweialdAQLaGGdveisksrLvLtllasgtLPdtparlmlkAlhirvllwevgsagslalkvanai 99 
                 k++k+s+rn+ G ++y++ltg+te+qeaar+kaw+ialdAQLaGGd ei+ksrL+Ltllas tLPdtparlml+Alhirvllwe+++ +++ +  ++ +
  KHJ32426.1 488 KIAKISTRNICGSQAYTYLTGITEQQEAARIKAWNIALDAQLAGGDIEINKSRLTLTLLASATLPDTPARLMLNALHIRVLLWEIANFSFYGYCPFRGL 586
                 6789*********************************************************************************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXIIIITTTTGGGXXXXXXXGG..GGGHHHH.HXXXXXXSGGGGGSS--SHHHHHHHHHHHHH CS
     DUF2014 100 aaklarsqWneArklnkklskekeskedeLPehlaaLleqdcddVlsddvvqraynLafnrpttenveeedegldsvveDvavrspldavAaWyssqll 198
                 a+ l +++W++A  +++    +k+ + d+LP+ l +Ll+qd+d V++d++ qraynLa+n ptt+n+  e++++d vv+D+a+r pldavAaW+ss +l
  KHJ32426.1 587 ASGLVKWKWKKAILQRELGIYSKD-EADDLPDNLIVLLQQDSDYVFNDSIAQRAYNLAWNLPTTRNIFVENDCMDIVVDDFAIRGPLDAVAAWFSSFVL 684
                 ************877776666666.99************************************************************************ PP

                 HHHHHHHH........HS---CHHHHHHHHHS-TTSCHHHHHHHHHHHH-CCCCHHHHHHHHHHH CS
     DUF2014 199 qrvLlesL.eeekeeeakkeveselelalkvaPigSaaqvrAlvakavlveekrgasiaealeal 262
                 q+++ +sL  +e+++ ++++v+++++la+k+aPigS++++r+l+a+++lv+ekrgasiae ++al
  KHJ32426.1 685 QKAISKSLqIKENNSVEEQSVAESIDLAIKIAPIGSTIHIRSLLARSILVKEKRGASIAETMQAL 749
                 ********7677778889999******************************************97 PP

>> HLH  Helix-loop-helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.1   0.6   6.7e-20     6e-16       1      53 []     165     239 ..     165     239 .. 0.97

  Alignments for each domain:
  == domain 1  score: 58.1 bits;  conditional E-value: 6.7e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHCST......................CSTTSS-STHHHHHHHHHHHHHHHH CS
         HLH   1 rraahnerErrRRdriNsaleeLrellP......................slppskKlsKaeiLekAveYIkhLq 53 
                 +++ahn++E+r+R ++N++++ Lr+ +P                      +l+p  Kl+Ka++L kA+eYI hL+
  KHJ32426.1 165 KKTAHNMIEKRYRTNLNDKIAALRDAVPslritsksargedtmddreelqGLKPAHKLNKATVLSKATEYIYHLE 239
                 799*********************************************99889999****************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (903 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       773  (0.0431145); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.38
# Mc/sec: 7193.59
//
Query:       KHJ32427.1  [L=776]
Description: putative striatin pro11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.5e-38  131.3   4.0    4.5e-38  131.3   4.0    2.0  2  Striatin     Striatin family
    7.6e-27   93.0  17.2    4.9e-05   24.0   0.3    7.1  6  WD40         WD domain, G-beta repeat
    8.4e-06   26.0   0.2       0.33   11.3   0.0    5.0  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
      0.011   15.6   0.0      0.023   14.6   0.0    1.5  1  eIF2A        Eukaryotic translation initiation factor eIF2A
      0.035   13.1   0.0       0.77    8.6   0.0    2.7  3  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
        1.6    7.5   7.5        3.7    6.3   7.5    1.6  1  CALCOCO1     Calcium binding and coiled-coil domain (CALCOCO1


Domain annotation for each model (and alignments):
>> Striatin  Striatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.3   4.0   1.5e-41   4.5e-38       1     154 [.      36     179 ..      36     180 .. 0.78
   2 ?   -2.9   1.8         3     9e+03     113     113 ..     273     273 ..     200     345 .. 0.56

  Alignments for each domain:
  == domain 1  score: 131.3 bits;  conditional E-value: 1.5e-41
    Striatin   1 TLqgvlhFLQtEwhrherdRneweiEraEmkarIakLegerrgaenlkkdlvrrikmLEyalkqerakylklkegtsaakenkkkekeeeeaeeeekse 99 
                 TLqgv++FLQtEwhrherdRn+weiEr+Emk rIakLeg++r++++ +++l++++++LE alk++ + ++ l  g +  ++   k+++  +  + ++ +
  KHJ32427.1  36 TLQGVMRFLQTEWHRHERDRNSWEIERQEMKGRIAKLEGSTRKSNAGNRALKKYVEILETALKERDKLVKDLRAGLDIPESVRVKKENASR--NFKE-R 131
                 9*************************************************************98865545555666666555544333332..2222.2 PP

    Striatin 100 eeskskekksakeslkkseaeeesesekrdeksrkksrqlLkqclqEitylltip 154
                 +++ +k++ks+          e++ ++ +++ +r++ + +++++++E+ yl+ +p
  KHJ32427.1 132 RDEPEKHHKSFFY-------PEDTVDNLDENPERSNLKSFMDKTQAEVIYLMLSP 179
                 2233333333322.......2556789999**********************877 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3
    Striatin 113 s 113
                 +
  KHJ32427.1 273 R 273
                 2 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0028       8.5       7      37 ..     356     391 ..     350     391 .. 0.70
   2 !   18.4   1.2   9.5e-07    0.0028       5      37 ..     413     458 ..     408     459 .. 0.89
   3 !   21.4   0.2   1.1e-07   0.00034       5      38 .]     467     518 ..     464     518 .. 0.88
   4 !    8.5   0.0    0.0013       3.8       8      38 .]     664     687 ..     657     687 .. 0.85
   5 !   19.1   0.0   5.8e-07    0.0017       1      38 []     691     729 ..     691     729 .. 0.91
   6 !   24.0   0.3   1.6e-08   4.9e-05       3      37 ..     735     774 ..     733     774 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0028
                 EESS.SSEEEEE....EETTSSEEEEEETTSEEEEE CS
        WD40   7 ltGH.ssvtsla....fspdgawlasGsdDgtvriW 37 
                 l+GH + v+s+      +p  + +++ +dDgtv+ W
  KHJ32427.1 356 LRGHlDVVRSVIftggGNPGEPEICTTGDDGTVKRW 391
                 799*5558***655555555555776777****977 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 9.5e-07
                 EEEESS.SSEEEEE.EETTSSE...........EEEEETTSEEEEE CS
        WD40   5 rtltGH.ssvtsla.fspdgaw...........lasGsdDgtvriW 37 
                  t +GH +sv +l  +sp+++            ++sG+ D t+r+W
  KHJ32427.1 413 FTHRGHtGSVMCLTsWSPSQNIsgggriqgdgwVFSGGQDATIRVW 458
                 4557**888************************99*********** PP

  == domain 3  score: 21.4 bits;  conditional E-value: 1.1e-07
                 EEEESS.SSEEEEE.................EETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtsla.................fspdgawlasGsdDgtvriWd 38 
                  t++GH + v+ ++                   pd+ +lasGs Dgt+++W+
  KHJ32427.1 467 ATIDGHtDAVWTICvlpgttgsvlgnnsnlyGGPDQLLLASGSADGTIKVWS 518
                 6889**66699999999***999999999999999999*************5 PP

  == domain 4  score: 8.5 bits;  conditional E-value: 0.0013
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  G  s+v ++        ++sG++D+ +r++d
  KHJ32427.1 664 GGSrSGVEGI--------IISGHEDRYIRFYD 687
                 5666779999........************98 PP

  == domain 5  score: 19.1 bits;  conditional E-value: 5.8e-07
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 gqc+++  +H   + +la spdg+ l+s++ D ++r+W+
  KHJ32427.1 691 GQCTYSMLAHpAAIAALALSPDGKELVSAGHDASLRFWS 729
                 68999999**888*************98877*******5 PP

  == domain 6  score: 24.0 bits;  conditional E-value: 1.6e-08
                 EEEEEESS...SS..EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGH...ss..vtslafspdgawlasGsdDgtvriW 37 
                 c++++t H    +  v+s+++s+dg+w++s++ Dg v+++
  KHJ32427.1 735 CIQEITSHrlmRGegVCSVSWSRDGRWVVSAGGDGVVKVF 774
                 888888896652257************997655*****95 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.13   3.8e+02      48      68 ..     500     520 ..     474     531 .. 0.87
   2 ?    0.0   0.0      0.36   1.1e+03      48      77 ..     588     617 ..     581     627 .. 0.85
   3 ?    4.5   0.0     0.015        44      52      81 ..     673     702 ..     667     708 .. 0.84
   4 !   11.3   0.0   0.00011      0.33      40      90 ..     703     756 ..     699     758 .. 0.88
   5 !    5.0   0.1    0.0099        30      38      65 ..     747     774 ..     744     775 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.13
  ANAPC4_WD40  48 pdgklLavaysdgevrlldae 68 
                  pd  lLa + +dg++++ +++
   KHJ32427.1 500 PDQLLLASGSADGTIKVWSVS 520
                  78889***********99875 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.36
  ANAPC4_WD40  48 pdgklLavaysdgevrlldaesgkvvhsls 77 
                  ++++ ++v+y d +v ++d +sg+ + +++
   KHJ32427.1 588 NSETAFVVSYLDAAVLVFDTKSGDEIAAME 617
                  6678899****************9988776 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.015
  ANAPC4_WD40  52 lLavaysdgevrlldaesgkvvhslsvkse 81 
                  ++  +++d  +r++da+sg++  s+ ++  
   KHJ32427.1 673 IIISGHEDRYIRFYDANSGQCTYSMLAHPA 702
                  78899****************999988776 PP

  == domain 4  score: 11.3 bits;  conditional E-value: 0.00011
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksek...avtclgWg 90 
                   + +La +pdgk L+ a +d ++r+ + e+  ++++++ ++      v++++W+
   KHJ32427.1 703 AIAALALSPDGKELVSAGHDASLRFWSLEKRVCIQEITSHRLMrgeGVCSVSWS 756
                  6899*********************************99986666689999997 PP

  == domain 5  score: 5.0 bits;  conditional E-value: 0.0099
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrll 65 
                  ++ v s++W+ dg+  + a  dg v+++
   KHJ32427.1 747 GEGVCSVSWSRDGRWVVSAGGDGVVKVF 774
                  677999*****************99875 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   7.8e-06     0.023      69     161 ..     667     765 ..     645     773 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 7.8e-06
                 TTSS-EEEEESSSSCEEEEEECS.CEEEEEE..EEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT......--EEEE-TTSSEE CS
       eIF2A  69 pkskefaviyGkmpakvslfdlk.vkviskl..eeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaan......atlvewspdgryv 158
                  ++ e ++i G+ ++ + ++d + ++ ++++  + ++  ++  sp gk ++ aG      +l +w  +k+ +i+++ +          +v ws dgr+v
  KHJ32427.1 667 RSGVEGIIISGHEDRYIRFYDANsGQCTYSMlaHPAAIAALALSPDGKELVSAGHDA---SLRFWSLEKRVCIQEITSHRlmrgegVCSVSWSRDGRWV 762
                 5666779***************77555555500555667899************876...59****9988888877654311222256899******** PP

                 EEE CS
       eIF2A 159 lTa 161
                 + a
  KHJ32427.1 763 VSA 765
                 987 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.23   6.9e+02     197     216 ..     500     519 ..     496     525 .. 0.87
   2 ?    8.6   0.0   0.00026      0.77     183     216 ..     697     730 ..     670     747 .. 0.71
   3 ?    0.5   0.0     0.081   2.4e+02     190     214 ..     750     774 ..     731     775 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.23
    Ge1_WD40 197 pdGtalatasedGevkffqv 216
                 pd   la  s+dG++k + v
  KHJ32427.1 500 PDQLLLASGSADGTIKVWSV 519
                 78888999********9988 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00026
    Ge1_WD40 183 kieehsliveaafspdGtalatasedGevkffqv 216
                  + + + i   a+spdG  l  a +d  ++f+ +
  KHJ32427.1 697 MLAHPAAIAALALSPDGKELVSAGHDASLRFWSL 730
                 33444589999*********************75 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.081
    Ge1_WD40 190 iveaafspdGtalatasedGevkff 214
                 + + ++s dG  +  a  dG+vk f
  KHJ32427.1 750 VCSVSWSRDGRWVVSAGGDGVVKVF 774
                 777899*****************98 PP

>> CALCOCO1  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   7.5    0.0012       3.7      59     122 ..      46     105 ..      36     178 .. 0.62

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0012
    CALCOCO1  59 kekeeykrdreeldrerkelesrveelkeelkesrekveeleekqkelerlseelaeeksalle 122
                  e ++++rdr++++ er+e++ r+++l+   ++s+   + l+   k +e l+ +l+e ++ l++
  KHJ32427.1  46 TEWHRHERDRNSWEIERQEMKGRIAKLEGSTRKSNAGNRALK---KYVEILETALKE-RDKLVK 105
                 567899***********************9999888777776...333344444433.333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (776 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 5362.90
//
Query:       KHJ32428.1  [L=554]
Description: hypothetical protein EV44_g3833 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       714  (0.0398237); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 4116.00
//
Query:       KHJ32429.1  [L=1651]
Description: putative structural subunit of the nuclear pore complex [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
          0 1296.9  33.3          0 1296.7  33.3    1.0  1  Nup192    Nuclear pore complex scaffold, nucleoporins 186/192
  ------ inclusion threshold ------
      0.074   12.3   0.0       0.18   11.0   0.0    1.6  1  Gcn1_N    Generalcontrol nonderepressible 1 (Gcn1) N-terminal


Domain annotation for each model (and alignments):
>> Nup192  Nuclear pore complex scaffold, nucleoporins 186/192/205
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ! 1296.7  33.3         0         0       3    1692 ..       7    1627 ..       6    1629 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1296.7 bits;  conditional E-value: 0
                  HHHHHHHHHHHHHHHTT.XTTHHHHHHHHHHTHHHHHHTTXXXXXXHHHHHCHCC..XSEEEETTE.EEEXXHHHHHHHHHHHHHHTXXHHHHHHHH CS
      Nup192    3 peafkeLynsieaassn.pesldelelllkklkqdLknllknppkneksRsqlkkektgkitlsdgseyklnqefiqealiLSdeldLdElaaaeLl 98  
                  +e++++Ly+++ a s++  +s+++l ++l+ + +d++nll+++++ne+sR++l++   g+i++ ++ eyk+n+ef+ ea +L+deldLdEl aa+++
  KHJ32429.1    7 LESLQALYADLLAFSEHrLSSIERLGAQLDMHMKDFQNLLDKKARNETSRKKLAT---GQIEIFGN-EYKVNEEFQREAQQLADELDLDELDAAQIF 99  
                  6789*************888*********************************76...********.****************************** PP

                  HHHCTHHH.HTTSXHHHHHHHHHHHHHHHHHHHHHHHHHHHT..XTTSXH.........TTX...XXXXX..XXXHHHHHHHHHHHHHHHHHHHHHH CS
      Nup192   99 ltaqeqqankpglslgevAvllYydrrkyilqiLryllqvaseeeedeek.........lls...swste..atklvtnileslkeikqllsklkdl 181 
                  + aq++ +   g +++ ++ +l+++rrk++l++L+ ++  +   + + ++         l     s   +   +k+++++++ l++i+ +l++l+d+
  KHJ32429.1  100 FVAQADIT-SLGQPALTNSLVLFHQRRKCLLDCLQIICMLTA--DVELDEvlredlqatL-GqivSP--RasSKKYTQRCISHLSDIRCWLQRLNDK 190 
                  ****9988.****************************99544..3334443355544431.143223..2569************************ PP

                  HHHHHHHHHHSXXTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXXXHHHHHHHHHH.HHHXXXXSHHHHHHHHHHHHHH...TSSSSXXXHHHHHH CS
      Nup192  182 ldkadvlkeiqknrflgsikfrrdlLekehelLaqilfglvaqsglekedilkllkhLakkldknDdltlhllpallaaf...ssledlsvledvre 275 
                  l+ a+++++  +++ l++++++r +L+k+he+L +ilf+l+++++ + +d+ ++l++L k +dk+D+l++h++pal a++   +  + +s+  +++ 
  KHJ32429.1  191 LNGASIVGK-LNPETLEAVEYQRVSLIKQHESLCTILFYLIKENHCDVKDFHSILDILRK-ADKYDNLLVHHIPALSACIsrfGGSDTVSAFAEASA 285 
                  *********.8899******************************************9655.******************988877777899999999 PP

                  HHHHHTSSSTTSSSHH.............HHHHHHHHHHHHHGGG....HHHHH.HHHHHHH..........HHHHHTTHHHHHHHHHHHHSXXSSX CS
      Nup192  276 lhekitkrleeeplvsdeeidlskwklkglkaaiklvflleligw....ckqep.eertkkfdfkedieklieeaiedgafefllsvaaetsakewe 367 
                  lh+ki+ +       +    d s+w l  ++aa+ +++l e+++w     ++++ +++t+ +  +++  kl  ea++dgaf+f+ls+ a+++++ew 
  KHJ32429.1  286 LHDKIVDQS------N----DHSSWTLTFVRAAFHVFWLSEYSSWfiesADENSfNQQTQDSLETKQRSKLFVEALKDGAFDFILSISADVKSAEWY 372 
                  999999999......3....6679*********************888877777788888888889999**************************** PP

                  XGGGTTTTXXSXXXSXXXXSXSXXXXHHHHHHHHHHHHHHHHHHHHHXHHHHHHHHHHHHHHH..HHXTTS.............TXXXHHHHHHHHH CS
      Nup192  368 dslrydfrslLqrkiprltpeklllseefeefllrrlhtlitdfIsnmafvLtkLRdreedsllsveslqqegleppanleediaqkadLErfllli 464 
                  d++r ++r++Lqrk+p + ++++++s+ f + l+++l+ +i++fI+n+++vL+kLR  e++++  ++s+ +              +++dLErf+++i
  KHJ32429.1  373 DPARHGLRQWLQRKSPVILADTIPFSNIFINILMEQLEAFIESFIANLPDVLRKLRIDEDEQR--QLSKDH-------------DHDLDLERFIVII 454 
                  ***************************************************************..555534.............3467********* PP

                  HHHHTTXHHHHHH.HHSXTTSHHHHHHHHHTSSXXHHHHHHHHHHHHTTXSSHHHHHHHHHHHCXTTXSS.XSSTTTBXXSHHHHHHHHHHHHHHHX CS
      Nup192  465 aylYenrpelale.FWsdkesnlygFiewassllpsplikaflkMLssLssgeenaraafnlLkdnsssa.gkkkrsssvswdhifksLsyYidklq 559 
                  +y++e+rp++ale FW+ ++  l gF++w s+++++pl++af++ML+s+s+ ee+a+aa+++L d++    gk++r++s++w++ifk+L+y+ +k++
  KHJ32429.1  455 SYTFEGRPKAALEgFWDVPDGALLGFVHWVSRRASTPLVSAFCEMLQSISEDEECATAAHHFLLDDGVPVsGKMRRTHSITWTQIFKELTYFSNKIR 551 
                  ********999999***************************************************997668*************************8 PP

                  XXX...XX.XXXXXXXX.........XXXSXXXHHHHHHHHHHHHHHHHHHHHXHHHHHHHHCXTTTXHHHHHHHHHTSSXXHHHHHHHHHHHHHTT CS
      Nup192  560 epe...ndlklrqkkqeneesiyrsraieeeleeeeivflsaflrLissvaknseearkallenaswqfldvllgLlsckvptpLkaailktLsaLv 653 
                  ++    + l +r  +               e e+e++++l+++lrLi++++ nse+ar +   n+ ++++++ll+L+s++v ++L+a +++tL++L+
  KHJ32429.1  552 DNPvplQPLSFRPFQG-----------NLLEAEPESVMMLECYLRLITKLCCNSETARSFFIYNSTFNLIELLLQLASSAVGSRLRANAFTTLRSLL 637 
                  8332444444444333...........4779****************************************************************** PP

                  S.XXHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXHHHHHHHHHHHHTSSHHHHHHHHHHHHHHTSXTTXSSSX.XSSXSSXTTTTTTTSSSSS CS
      Nup192  654 k.kseeeaakiWrsLDrwifkgsqllptvpttsakkqsgsleekeafesrletysevraflqLlkaLlqplesesea.kgklpfPedLGagyRkpGi 748 
                  + k+ e +  iW+sLD+w+++  +  +t+   ++++  + +++ ++++s +++++e++af+qLl+aL+  l++++     +lpfPe+LG  +R+pGi
  KHJ32429.1  638 SnKTREFSDYIWNSLDSWVSGTHSPGSTM--LRSVTSVRFMSKGSILQSLASGFEEPNAFIQLLYALVL-LSTDEPRfRNNLPFPENLGVANRQPGI 731 
                  *777777**************98877773..333344778889999**********************6.55555555******************* PP

                  HHHHHHHHH.HHHTGGGGXX..XHHHHHHHHHHHHHHHHHHHHTSXHHHHHHHCCTTTTSSSSTTCHHHHHHHHHSTHHHHHHHHTSHHHHHHHHHH CS
      Nup192  749 epYldfvldevflkstrdlk..dpaekwelqlsclelletsLasfdpslllfseqaginldslvstsdlatyvklhgfaavlnllfkekvlklllki 843 
                    Y+dfv++evf+  +r++   d  +++ l l+cl+++  +L++f+++l++f +q  i++ +++++s+l++y+ lh+f++v++++f++kv++ l++i
  KHJ32429.1  732 TLYIDFVIGEVFSYPSREIDnlDVIQRRLLNLTCLDFISVCLETFNENLIIFGSQGYISISNSIQASSLENYILLHPFSRVMEWIFNQKVMNTLFAI 828 
                  **************77767611567************************************************************************ PP

                  HXXXHHHHHH.SXTTSHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHCXXXXXXXSXTTXSSHHHHHCCXTHHHHHHHHHGGGTXHHHHHHHH CS
      Nup192  844 ieegvdeldsyasgkseleelvllaLeilekvLelQetfleellpilkkkeniyrpknvgsaglssfedillfnLslvlnialYvgldnpeialasl 940 
                  ++++  e++  a+++s+l+ ++l+ ++++ +vL+lQ t+le+++p++ k+++ yr+ +++s++  sfe+++l++L+++  +++Y g+++pe+ + sl
  KHJ32429.1  829 VNQDPAEVAR-AEPNSPLVLCLLRGISVMILVLDLQATYLEIIRPLI-KSHSEYRRLPFSSSSFGSFEEGILNHLTIIPTLGRYFGTGHPELVILSL 923 
                  **********.888*********************************.89*********************************************** PP

                  HHHHHHTTXTTG.GTSS.XXXXXXSXHHHHHHHHSSXHHHHHHHHHHHHHSXX.XTTTTTSXHHHHHHHHHHHHHHHHHHSSTTSXXHHHHHTTXXX CS
      Nup192  941 kiLekissspkv.sass.asrllkknklltvfesvdeserIkqgfveqLeaeiedeeqeeeeealqiKlaILdlLnsnLsasskeptvahfLLGfdv 1035
                  k+Lek++ss k+ sa   + r + +n++l ++  +d+s+ I++ + +++e ei+  +q++ ++a+ iKl+IL+l++s+L+as+++p++ah+LLGf++
  KHJ32429.1  924 KLLEKFASSMKLaSAPReMLRGSGRNRILAAL--IDDSDTISNILLKEMEVEID-INQGPLSPAYIIKLEILNLIISCLRASPNNPSIAHLLLGFRC 1017
                  ************76666999**********98..899****************5.7889************************************** PP

                  B.TBXXXX...TTSTTTTTXSHHHHHHHHHTTXXXXXTTSX......BXHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT.THHHHHHHHXXXX CS
      Nup192 1036 r.ndlslgneqqsgviasqssllhsllsllesslelisegdksrgskideaparLaekileillkLcrnpltseltLryLretefllrhllslppki 1131
                  + + l ++   +++ ++++ sl+h++l++ +s++ ++ +++      +  ++++L  k+l++l++L+  p++s +t+ +Lr++ ++++h+++ + +i
  KHJ32429.1 1018 GnEGLFIE---PNSSFNKSISLFHTILNMIISLPIAD-DIN------LIPWLVTLQHKALKVLKELWITPISSDITITELRAH-DFFFHTFAKEQVI 1103
                  *8888888...679****************8888877.657......9***********************************.************* PP

                  XTTXXBTTBXTTS.....TTSTTSTTHHHHHHHHHHHHHHHHHHHHHTTTTTSSSXHHHHHHHHHHHHTEE.XSSSSE..XXXTTTSXXSXXTTSXG CS
      Nup192 1132 dentlWngqefdgslssnkeflssesigallsFlnqrslllqylslelhslsqsgstskkkrlvdlLlgsn.taeeeengspkildlLdvlnfefke 1227
                  ++  +W+g ++ +      +f  s+++ ++++Fl  r+ l++y s+el ++s++ s+s  +r++++L+gsn +++e+    ++i+d++d++nf+++ 
  KHJ32429.1 1104 QPIMTWDGINTRD-----PNFPASSGVICFSEFLGRRAILFEYYSTELIQISKTYSPSTNQRILNILMGSNkVEDEQAIDYANIFDFFDFINFQIIP 1195
                  *************.....9****************************************************7766777889**************** PP

                  GSXXXXHHHHH....HTTXXXXBXXXXX.XXXBXXHHHHHHHHHHHHHH..XSSXSHHHHHHH....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      Nup192 1228 keeqpqleffdkvnlellLdkceekdadsgnklydisklekllrleksslkqlvqseskagqekeimaEiekileyavklnrqkelreaqlkvLhsW 1324
                    ++p + ++     +l++ +c ++ +ds +  yd++kle+ l l+ s++  +v+  ++++    ++ ++++++ y++k nr k+l ++++++L++W
  KHJ32429.1 1196 LGPPPMIPWLI----DLDILAC-LDIQDSPEISYDTAKLEEFLLLKVSEVI-KVNHIEHEQDLVTLNSQVQELIAYYTKENRLKMLTTYRYQALKAW 1286
                  99999777776....9******.7777779999*************87766.55555555555578899**************************** PP

                  HHHHHHHHHHSXXXSHHHHHHHHHHHHHHHHHHHHHTTTXHHHHHHHHHHHHHHHTTXXXXXXXX...XXXXHHHHHHHCCTTHHHHHHHHHHHHHT CS
      Nup192 1325 vqLvqvlvsdgelsseersnfilevlqkilpkindyveediqfaeelaslvsvllfdlyeklrqsikkseeqketgnlsserLlqlfktciegIlss 1421
                  vqL+ +++++g+++  ++++f+  +lq+i+p++++ +e+ +++ +ela+l++ llf+l+     ++k++    e+++l+s+r +qlf+ ++++I++ 
  KHJ32429.1 1287 VQLILMIIEKGDFDDVSKTSFVSRALQAIMPRLENDIEI-VDETAELARLAKALLFSLDLGAD-CFKQN----ELAELVSDRVFQLFQISLRAIITI 1377
                  *********************************988876.67899**************9886.56455....45589******************* PP

                  -S-HHHHHHHHHHHHHHHHTTT---HHHHH........HHHHHHHHHHHTHHHHHHHHHHHTSS-HHHHHHHHHHHHHHHHH.TT---H.HHHHHHH CS
      Nup192 1422 estqkLRsdlYvlllnyLqieasetskanlslkee.slkkeilqiiksygekLieviCnDaitgegvcritalllLdsLvelsssnksnfilellvk 1517
                  +++ +L++ +Y ++ +yL+++      ++ls k +    + +++++ks+g+kLi+++C+Da  ge +cri al+lL  +v++++ ++s++++++l++
  KHJ32429.1 1378 GTKISLKELYYNICFQYLSSM------TDLS-KASgLYHRYNIKMLKSAGDKLIDTVCDDANNGESMCRISALFLLICFVKIEKVEDSKYVVNSLIR 1467
                  ********************3......3332.234378999*****************************************8777*********** PP

                  TTHHHHHHHGGGGHHHHHH---------------HHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTSSSS-SS---...--S-SSHHHHH... CS
      Nup192 1518 nnyLkllvrslkrtdealqeilkpdpesldalyetvfesklalLirlAqtrkGAeqLLqnklfsvlkeckflaidPDlglkinsldnpllskalnnt 1614
                   n+++llv+sl+++ ++l+++l +d++        ++++k+alL +++q r GA+++ ++++f+++++++++a+dPDlg+   +++    ++a+   
  KHJ32429.1 1468 LNFIGLLVESLRTISQDLNDVLIEDTDIYL----SYCHAKFALLQEISQNRIGATAVCNADIFNAVEDSGLFAVDPDLGV---NIKG---PEAV--- 1551
                  **************************9844....78********************************************...4444...7888... PP

                  HHHHHHHHHHHHHHHHHHHTT-STT...HHHHHHHHHHTTTHHHHHHHHTT....---..HHHHHHHHHHHHHHHHHHHH CS
      Nup192 1615 eryfellvpvlqLitaillSlGssnksaieqvrklLkahrdlvvgvLKrdalpesklg..keeeeegLkelaklfvllat 1692
                  e+y+++l++vl++++ai+lS+G++n+++ + +rk+L+  r  ++ +LK++a    ++g  k+++ + ++++ +l+  l++
  KHJ32429.1 1552 EKYYSILAAVLRILCAIVLSRGPQNQQTLNSARKFLSVIRPSILNILKKSA----GIGakKNTTTNTIDDITDLILFLIS 1627
                  9**************************************************....5552123444489999888877766 PP

>> Gcn1_N  Generalcontrol nonderepressible 1 (Gcn1) N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   2.1e-05      0.18     234     282 ..     617     665 ..     611     708 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 2.1e-05
      Gcn1_N 234 vsssvspevRrealealsklyaanpelvskviiealwswlesleeaekd 282
                 +ss+v + +R +a  +l++l+++++ ++s+ i ++l sw++ +++  + 
  KHJ32429.1 617 ASSAVGSRLRANAFTTLRSLLSNKTREFSDYIWNSLDSWVSGTHSPGST 665
                 5666************************************998655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1651 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       696  (0.0388198); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.01u 0.34s 00:00:01.35 Elapsed: 00:00:00.48
# Mc/sec: 10325.87
//
Query:       KHJ32430.1  [L=2874]
Description: putative phosphatidylinositol 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.2e-49  166.5   0.0    2.1e-48  165.3   0.0    1.6  1  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
      8e-12   45.5   0.4    4.5e-11   43.1   0.4    2.5  1  TAN             Telomere-length maintenance and DNA damage re
    2.5e-06   27.2   0.0    7.7e-06   25.6   0.0    1.9  1  FATC            FATC domain


Domain annotation for each model (and alignments):
>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.3   0.0   3.5e-52   2.1e-48       8     249 ..    2516    2755 ..    2510    2756 .. 0.91

  Alignments for each domain:
  == domain 1  score: 165.3 bits;  conditional E-value: 3.5e-52
                      CSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHC......TTSTCHHHHHHHHHCHC CS
  PI3_PI4_kinase    8 vgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekk......gvpptasveslrvaldk 94  
                      ++ddlrqd  + qvf  ++e+l+ ++++ +r+l ++ty+v+pl+  +giie+v+++ +++  l   +e +      + +++ ++ +  v+ + 
      KHJ32430.1 2516 GNDDLRQDAIMEQVFDQVNELLKTNRSTEQRQLHIRTYRVLPLTNIAGIIEFVPNTIPLHDYLMPAHERFypkdltPSRCRNEIAA--VQAKG 2606
                      679***************************************************************99888776554444444444..44444 PP

                      HCCHHHHHCCHHHHHHTSSTTHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHT-TT--TTTEEEETTTSEEEESSTTTCCTCSHCSS CS
  PI3_PI4_kinase   95 kklkkekklkfekrtalkpksgllqeFvkkspsaeewlearkqFvrslaklsvldyilgngDRhldNilvdktsgklihIDfGlilpdewkll 187 
                      ++l     +k +k   + +  ++  +F++++ +++ew+  r ++vrs a +s+l+++lg+gDRh++N+l+d++sg+++hID G+++ + +++l
      KHJ32430.1 2607 SDLR----IKTFKAVIERFHPVMRYFFTENFLDPDEWFLKRLSYVRSTAAISILGHVLGIGDRHAHNLLLDQKSGEIVHIDLGIAF-EMGRIL 2694
                      4443....336788888999******************************************************************.****** PP

                      SS-.SSSSSS-THHHHHHTSTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCSSC CS
  PI3_PI4_kinase  188 pfpqekvPfrltrelvlaidpskdeglfresceealealrrdqnlltrllkkavkdglilwe 249 
                      p+p e+vPfrltr++ + ++ +k eg fr++ce +leal  ++  ++++l+   +d+l +w+
      KHJ32430.1 2695 PIP-ETVPFRLTRDILDGMGITKTEGVFRRCCEATLEALQAESSTIMSTLDVLRYDPLHSWS 2755
                      ***.******************************************************9997 PP

>> TAN  Telomere-length maintenance and DNA damage repair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.1   0.4   7.5e-15   4.5e-11      86     150 ..       1      65 [.       1      66 [. 0.96

  Alignments for each domain:
  == domain 1  score: 43.1 bits;  conditional E-value: 7.5e-15
         TAN  86 lRllvekavsklkrktlkalldhitqllpgp.dgelleplaldyikaLrsllsvpphvehLskeqW 150
                 +Rl+v++av+k+k kt++ l++h +q l  p d++++  l+ dy+k L++++++ ph+e+L+ + W
  KHJ32430.1   1 MRLVVKAAVPKIKPKTVNLLVEHHIQALT-PfDSKIFLTLTRDYLKNLSIIFQHAPHLENLKVDRW 65 
                 7***************************5.5599******************************** PP

>> FATC  FATC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   1.3e-09   7.7e-06       2      27 ..    2827    2852 ..    2826    2852 .. 0.96

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 1.3e-09
        FATC    2 LsveqQVdrLIkeATdpeNLaqmyiG 27  
                  Lsv ++V++LI++ATd +NLa ++ G
  KHJ32430.1 2827 LSVYATVNDLINQATDEKNLALLFAG 2852
                  9**********************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2874 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.24u 0.31s 00:00:01.55 Elapsed: 00:00:00.53
# Mc/sec: 16220.43
//
Query:       KHJ32431.1  [L=147]
Description: hypothetical protein EV44_g2890 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       829  (0.0462379); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1093.35
//
Query:       KHJ32432.1  [L=104]
Description: hypothetical protein EV44_g3229 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       558  (0.0311228); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 764.95
//
Query:       KHJ32433.1  [L=437]
Description: putative ribosome biogenesis protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-48  162.9   0.5    1.4e-47  162.3   0.5    1.2  1  Brix      Brix domain
  ------ inclusion threshold ------
      0.063   13.0   0.0      0.063   13.0   0.0    2.9  4  HD_4      HD domain


Domain annotation for each model (and alignments):
>> Brix  Brix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.3   0.5   1.6e-51   1.4e-47       5     193 .]      45     342 ..      41     342 .. 0.85

  Alignments for each domain:
  == domain 1  score: 162.3 bits;  conditional E-value: 1.6e-51
                 -HHHHHHHHHHHHHCTTSEEEEEE.ECT-TTTHHHHHHH...-HHHHHHHH..HCTCSEEEEEE..SSTTEEEEEEEEECECTGGGSTTTS......TS CS
        Brix   5 ssrlrqllkdlrslmkphtasflk.rnsnklkdlvelag...vthlellse..kndcslfvfelskkrPngptlefkvenyslmkdlkkak......kt 91 
                 +s ++ql+kd+r++m+p+ta++lk r+sn+l+d+++++g   vthl+l+s+   ++++l+++ +    P+gptl+f+venysl+kd++ka       ++
  KHJ32433.1  45 PS-VSQLVKDVRQMMEPDTAARLKeRRSNRLRDYLSMSGplgVTHLMLFSRseLGNTNLRIAIT----PRGPTLHFHVENYSLCKDIRKALrhpkgkGK 138
                 44.99*******************9999***********************999999*******....********************999******** PP

                 -TT---EEEEES.HHH..................HHHHHHHHHHH..SEEEG..-B-GG-SEEEEEEES.....CCTTTECEEEEEEEEEE........ CS
        Brix  92 efgsrPllvfngkenf..................kllksllqdlFrvpkislkspklsglrrvvlftaae....nqetdktisfRhYaikl........ 160
                 ef + Pllv+n   nf                   l+++++q+lF  ++i ++s++ls+++rv+l+  +e    ++e+   +++RhYai++        
  KHJ32433.1 139 EFITAPLLVMN---NFksstdeantdgkipkhleALVTTIFQSLF--KPILPQSTPLSSIKRVMLLD-REpvdsQNEA-YILNLRHYAITTksvglskp 230
                 ***********...8888888899999999999************..99******************.7768643332.589*******9988888888 PP

                 .................E..STTTTECT....................................................................... CS
        Brix 161 .................kksgkklpnleke..................................................................... 173
                                  ++++k       +                                                                     
  KHJ32433.1 231 lrrlktaeklissrksmQSDKK-------Nppnlgkfadiadylirdeddgflteatsgseidtdavveiaetrakilskrqkernkkdekkrqttnyv 322
                 8888777777666666533333.......1444444578888888888888888888888888888888888888888888888888888888877665 PP

                 T..EEEEEEESEEEEEEEEE CS
        Brix 174 kkerveLeEiGPrfdLklrk 193
                 +k+ v+L+E+GPr++L+++k
  KHJ32433.1 323 EKRGVRLVELGPRMRLRMIK 342
                 59***************986 PP

>> HD_4  HD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   7.1e-06     0.063      62     120 ..      42      94 ..      34     100 .. 0.85
   2 ?   -2.2   0.0      0.33     3e+03      78     125 ..     194     238 ..     187     264 .. 0.56
   3 ?   -0.9   0.5      0.13   1.2e+03      65      98 ..     288     320 ..     279     325 .. 0.75
   4 ?   -2.5   0.4      0.41   3.7e+03      85      99 ..     376     390 ..     362     413 .. 0.59

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 7.1e-06
        HD_4  62 rfGeevarLvegvsklkrlqkvaaadeaeekaeqvenlRkmLlAmveDirvvliklAdr 120
                 ++G++v++Lv++v+++++  +      a  k++   +lR+ +l+m+ ++ v  + l +r
  KHJ32433.1  42 EIGPSVSQLVKDVRQMMEPDTA-----ARLKERRSNRLRD-YLSMSGPLGVTHLMLFSR 94 
                 589***************9999.....4555555566666.**********99999998 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.33
        HD_4  78 krlqkvaaadeaeekaeqvenlRkmLlAmveDirvvliklAdrlqtlr 125
                 kr+  + ++  ++++++++ nlR+  ++      v l k   rl+t++
  KHJ32433.1 194 KRVMLLDREPVDSQNEAYILNLRHYAITT--K-SVGLSKPLRRLKTAE 238
                 44444446677778888888888843333..2.333333333333333 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.13
        HD_4  65 eevarLvegvsklkrlqkvaaadeaeekaeqven 98 
                 ++v++++e  +k+   +++ ++++++ek++q+ n
  KHJ32433.1 288 DAVVEIAETRAKILSKRQK-ERNKKDEKKRQTTN 320
                 5788888888888888888.56666666666655 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 0.41
        HD_4  85 aadeaeekaeqvenl 99 
                 +++++e+k+ q en+
  KHJ32433.1 376 RKEKEERKKIQRENI 390
                 344444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1705  (0.0950973); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3037.78
//
Query:       KHJ32434.1  [L=1304]
Description: putative wd repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.9e-211  702.2   7.4   5.9e-211  702.2   7.4    1.7  2  Rav1p_C   RAVE protein 1 C terminal
     0.0086   16.9   3.3        7.2    7.7   0.0    4.9  4  WD40      WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> Rav1p_C  RAVE protein 1 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.19   1.7e+03     112     146 ..      91     127 ..      69     147 .. 0.76
   2 !  702.2   7.4  6.6e-215  5.9e-211       1     638 []     609    1234 ..     609    1234 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.19
     Rav1p_C 112 gpswaairkidi..reltpheigdsiWlkdgtLvvaa 146
                 + +w   + +++  +++t+ ++    W ++++L v++
  KHJ32434.1  91 NLKWSLQESFNLdeTSITTYSVKTLSWGSSEELLVGS 127
                 44566666555511568999*************9998 PP

  == domain 2  score: 702.2 bits;  conditional E-value: 6.6e-215
     Rav1p_C    1 glletwkakvdkekkklewletseletgieepslisgsslkkvavvdesrseLsiwdlksgvleyeeefeeedsikdldwtstpdsqsilavgFekk 97  
                  g+l++w+a+++ + +k++w++ts+l t i++ps +sg+ l+k+a+v++++++L+iw+l ++ +e+ ++++ +d+i+ ldw stpds+ ilav F  +
  KHJ32434.1  609 GVLQLWSANINLNLNKIDWIKTSSLCTCITQPSIVSGNYLRKIALVNSKKTQLTIWNLLDACIEHVQDYDFYDTIQGLDWISTPDSKLILAVRFLYR 705 
                  789********************************************************************************************** PP

     Rav1p_C   98 vllltqlRydylnkgpswaairkidireltpheigdsiWlkdgtLvvaaGnqlfikdkklelelkkksessikskkeksvdlfelvselngpLpvyH 194 
                  v++l+q++yd l+++psw++ir++++re+tph+ig s+W+ +g+ ++++Gnq++ ++k + ++  +  ++      ++++d+fe++++ln  +p+yH
  KHJ32434.1  706 VTILAQIKYDFLDRSPSWITIRNFSVREITPHPIGISMWMCNGDYIIGTGNQILTANKAVVTTDLAIDHQL--LPYKSEWDIFEIMTQLNKSIPAYH 800 
                  ***********************************************************999333333334..444456****************** PP

     Rav1p_C  195 PqfLiqlilagklelvkeillkLfkklkflsedeeldsllelelekflkedekkkskkkeaeslaeeekeeeeeevevfdeevaksLaekLkkiklp 291 
                  PqfLiq++ a+k e v++++l+L k lk++ e++ +d++l++++e+f+ e + k  + ++ +s  +   +++ +e e+++e+ ++ +++kL ki lp
  KHJ32434.1  801 PQFLIQCVNADKFEFVEQVILELCKILKYYIEGDPIDDFLGIDIESFYIEPNYKPITYTTGQSNFS-ILSHHFDERETITEAHVSYVTDKLAKIFLP 896 
                  ************************************************999988855444443333.23345577999******************* PP

     Rav1p_C  292 qLtrheqitLvnvveaveevekerrslDenglrfllglklfllrkkeeeqkelslRdiswAlhSdsqeiLldlverqlknkllWeaarelglfmWlk 388 
                   L+r eq +L++++++v+++   ++slDen++++l+ + lf++ + +  +  + +R+i+wA+hS+ q++L+d+v+rq+++k+ We+a+e+g++mW+k
  KHJ32434.1  897 FLSRLEQLNLIDTINCVSNILPIKKSLDENAIKYLFSF-LFQNIRCRVGSPIMGWREINWAYHSKCQDTLIDMVSRQYRGKVSWEKAQESGICMWIK 992 
                  **************************************.777777778999********************************************** PP

     Rav1p_C  389 dsealrkqfeeiArneytkseerdPvkcslfYlALkKkqvlqgLWriaswhkEqkktlkfLsndFseprwktaAlKNAfaLlskrRyeyAAaFFLLa 485 
                  d+++l + fe+iArney k++ ++P++cslfYlAL+Kk+vlqgLWria+w++Eq++t ++L+n+F+e++w+taA+KNA++Ll+k+Ry+yAAaFFLLa
  KHJ32434.1  993 DRTKLLSFFEDIARNEYNKTDLKNPIDCSLFYLALRKKSVLQGLWRIATWNREQSATSRLLANNFQEKKWRTAAMKNAYVLLGKHRYQYAAAFFLLA 1089
                  ************************************************************************************************* PP

     Rav1p_C  486 dslkdavnvllkqlkdlqLAiavarvyegddgpvLkelleeevLpeAvkegdrWlaswafwmlkrrdlavraLvtpleelleekkkeeakseksksf 582 
                  d l d++nv+l+qlkdlqLAia+arvyegdd+  L +lle+++Lp A ++gdrW+aswa+  l+++dl +++L+ p ++l + +    a + ++ks+
  KHJ32434.1 1090 DCLSDSINVILTQLKDLQLAIAIARVYEGDDSAALVDLLEKKMLPLASQKGDRWMASWAYYILQKNDLGLKVLIFPSHNLSDLS---WAINFEAKSY 1183
                  *******************************************************************************99966...344559**** PP

     Rav1p_C  583 lkdDPalvlLYkqLrkkslqtlkgalkvsekeeyefvlrvarlydrmGcdllaLsL 638 
                  l +D ++  +Y qLr+ ++       ++ + +e+++vl++arly rmGc llaL+L
  KHJ32434.1 1184 LINDSSITAFYVQLRDTTTIPH----EI-ALMEWNLVLQNARLYYRMGCPLLALHL 1234
                  ****************443333....33.458**********************97 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0    0.0008       7.2      18      37 ..     156     176 ..     145     177 .. 0.84
   2 !    4.3   0.1    0.0093        83      24      37 ..     210     230 ..     189     231 .. 0.59
   3 ?    1.0   0.1       0.1   9.3e+02       5      25 ..     412     425 ..     409     436 .. 0.75
   4 ?   -3.4   0.0         2   1.8e+04      21      38 .]     476     492 ..     468     492 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0008
                 EETTSSEEEEEE.TTSEEEEE CS
        WD40  18 fspdgawlasGs.dDgtvriW 37 
                  s d+a++as++ +D+ v+iW
  KHJ32434.1 156 LSYDSAFIASSGpYDRFVKIW 176
                 5889****988777******* PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.0093
                 E.......EEEEETTSEEEEE CS
        WD40  24 w.......lasGsdDgtvriW 37 
                         l + + D+ +riW
  KHJ32434.1 210 IdqsiinvLYTTCADQIIRIW 230
                 14444443555444******* PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.1
                 EEEESS.SSEEEEEEETTSSEE CS
        WD40   5 rtltGH.ssvtslafspdgawl 25 
                 ++ltGH s +t +        l
  KHJ32434.1 412 TVLTGHsSRITNI--------L 425
                 5799**555*999........5 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 2
                 TSSEEEEEETTSEEEEEE CS
        WD40  21 dgawlasGsdDgtvriWd 38 
                   ++++ ++   ++ +Wd
  KHJ32434.1 476 KYDMVVIAT-QSKISLWD 492
                 556677778.89999**8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.82u 0.25s 00:00:01.06 Elapsed: 00:00:00.43
# Mc/sec: 9109.81
//
Query:       KHJ32435.1  [L=505]
Description: hypothetical protein EV44_g1959 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    0.00013   22.7   0.0    0.00063   20.5   0.0    2.2  1  ANAPC_CDC26  Anaphase-promoting complex APC subunit CDC26


Domain annotation for each model (and alignments):
>> ANAPC_CDC26  Anaphase-promoting complex APC subunit CDC26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   3.5e-08   0.00063       1      28 [.       1      28 [.       1      43 [. 0.85

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 3.5e-08
  ANAPC_CDC26  1 MLRRkPTtItLtseDiaeyederqrqke 28
                 MLR +PT+I L   Di++++ +rq  + 
   KHJ32435.1  1 MLRLPPTVIGLARSDIQDHDKRRQFSHC 28
                 **********************986555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 3934.86
//
Query:       KHJ32436.1  [L=319]
Description: putative short chain dehydrogenase reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-28   99.7   0.9    7.7e-28   97.3   0.9    1.9  1  adh_short     short chain dehydrogenase
    3.8e-19   69.2   0.1    1.3e-18   67.4   0.1    1.8  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
     0.0056   16.6   0.1      0.011   15.7   0.1    1.5  1  KR            KR domain
  ------ inclusion threshold ------
      0.026   13.9   0.1      0.036   13.5   0.1    1.1  1  Gasdermin     Gasdermin pore forming domain


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.3   0.9   1.7e-31   7.7e-28       1     192 [.      12     220 ..      12     223 .. 0.86

  Alignments for each domain:
  == domain 1  score: 97.3 bits;  conditional E-value: 1.7e-31
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT............TSEEEEEE-TTTSHHHHHHHHHHHHHHH.SSESEEEE--- CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee............gakalaiqvDvtdreevealvekavkkl.gkldvLvnNAG 86 
                 +++++tGa+sGIG+a++++++  +++vv+vd+++ +le+++ ++ +e            ++++ ++ +Dv++ e+ eal   +++k+ gk+ +L  NA+
  KHJ32436.1  12 NTAVITGAASGIGLALSRKCVGYNMTVVMVDINATNLEAAKLSILKEnqtnllekhmnkSKNVEIVVMDVAKIEDYEALKMLIQDKFeGKISLLALNAA 110
                 589*******************************9999876443322222233334444667************************************* PP

                 SS--SSGGGCSHHH.HHHHHHHHTHHHHHHHHHHHHHHH....HCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGT..EEEEEEE CS
   adh_short  87 itgsgpfselseee.wervievNltgvflltravlpaml....kqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptg..irvnava 178
                 i    + s+  +++ ++rv++vNl+gv+    ++l        +++ ++Iv ++S +g    +g +aY +sKaa++ lt+ la +l++ +   +++ + 
  KHJ32436.1 111 IL---DKSNWADTAyFRRVMDVNLFGVIYGLNTLLGLVTkhstNENPAAIVITGSKQGITNPPGNPAYNTSKAAIKVLTEHLAFDLSKLSpfTSIHLLI 206
                 *3...4444455555**************999988886666668889*****************************************999999***** PP

                 ESSBSSHHHHHHCT CS
   adh_short 179 PGlvdTdmakelre 192
                 PG + T+++ ++ +
  KHJ32436.1 207 PGWTFTGITGNRAP 220
                 ****9999988765 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.4   0.1   2.9e-22   1.3e-18       1     181 [.      18     217 ..      18     243 .. 0.80

  Alignments for each domain:
  == domain 1  score: 67.4 bits;  conditional E-value: 2.9e-22
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGH..HHHHHHHHHHTT..........SE.E..EE--TTSHHHHHHHHHHHHHHH.SSEEEEEE-----E CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneea..kkrveelaeelg..........ae.v..lecDVtdeeqvealveevvekf.gklDilvnnagiap 81 
                   GaasgIG a+ +++    ++vv++d+n  +  ++++  + +e +          ++ v  + +DV++ e+ eal   +++kf gk+  l  na+i +
    KHJ32436.1  18 GAASGIGLALSRKCVGYNMTVVMVDINATNleAAKLS-ILKENQtnllekhmnkSKnVeiVVMDVAKIEDYEALKMLIQDKFeGKISLLALNAAILD 113
                   9**************************9875322222.2222211222222223224467************************************* PP

                   GCSS-GGGH-HHHHHHHHHHHTHHHHHHHHHHHHHCTSC......CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGG..GTEEEEEEE CS
  adh_short_C2  82 klkgpfletsreefdraldvnlyslfllakaalplmkeg......gsivnlssvgaervvpnynaygaaKaalealtrylAvelgp..kgiRvNavs 170
                   k  ++ ++t  + f+r++dvnl ++++ ++ +l l++++      ++iv + s ++    p++ ay+++Kaa++ lt  lA +l +      ++   
    KHJ32436.1 114 K--SNWADT--AYFRRVMDVNLFGVIYGLNTLLGLVTKHstnenpAAIVITGSKQGITNPPGNPAYNTSKAAIKVLTEHLAFDLSKlsPFTSIHLLI 206
                   *..777666..89*******************996665557778999*************************************9855567788888 PP

                   E--BHCTGGGG CS
  adh_short_C2 171 pgpikTlaasg 181
                   pg++ T ++ +
    KHJ32436.1 207 PGWTFTGITGN 217
                   88888877554 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   2.4e-06     0.011       2     154 ..      13     180 ..      12     202 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 2.4e-06
                 EEEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS...........--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHS.S---EEEE--- CS
          KR   2 tylitGGlGgLGlelarwlaekgarhlvllsRsa.........aadedskaliaelealgaevevvaaDvsdkdavealleeikaee.ppikGvihaAg 90 
                 t +itG++ g+Gl+l+r  +    + ++ +  +a           +e++++l+++  ++  +ve+v +Dv++ ++ eal   i++++ ++i+     A 
  KHJ32436.1  13 TAVITGAASGIGLALSRKCVGYNMTVVM-VDINAtnleaaklsILKENQTNLLEKHMNKSKNVEIVVMDVAKIEDYEALKMLIQDKFeGKISLLALNAA 110
                 568************9998876544443.33333245556555556666668888888888***********************999999999999999 PP

                 ------TTT--HHHHHHHHTTT....THHHHHHHHHTTT....S--SEEEEEEEHHHHH--TT-HHHHHHHH CS
          KR  91 vlrdklleemtaedleqvlapK....vkGawnLhelled....esldffvlfSSiagllgsagqanYaaaNa 154
                 +l+++  +++  + +++v+       + G+  L  l+++    e+   +v++ S  g++  +g  +Y +  a
  KHJ32436.1 111 ILDKSNWADT--AYFRRVMDVNlfgvIYGLNTLLGLVTKhstnENPAAIVITGSKQGITNPPGNPAYNTSKA 180
                 9998877654..445555555411113444444444443344455566666666666666666666666555 PP

>> Gasdermin  Gasdermin pore forming domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1     8e-06     0.036     104     184 ..      24     106 ..      11     130 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 8e-06
   Gasdermin 104 aavesqss.sgslevqevsvqqlkleslqerklldaepsfL.qqlrerkenLyVvteaiettqevvltetsqveesvkgalgi 184
                 ++  s  + ++++ v +v+++ ++le+ + + l + + ++L + + ++k++ +Vv+++ ++     l+  +q ++ +k++l +
  KHJ32436.1  24 GLALSRKCvGYNMTVVMVDINATNLEAAKLSILKENQTNLLeKHMNKSKNVEIVVMDVAKIEDYEALKMLIQDKFEGKISLLA 106
                 44444443279****************8878887777788834556666777999*******999*********999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       812  (0.0452898); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 2440.18
//
Query:       KHJ32437.1  [L=476]
Description: putative swi snf complex protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-16   59.8   0.1    3.9e-16   58.7   0.1    1.6  1  SWIB      SWIB/MDM2 domain


Domain annotation for each model (and alignments):
>> SWIB  SWIB/MDM2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.7   0.1   2.1e-20   3.9e-16       2      74 .]     254     325 ..     253     325 .. 0.96

  Alignments for each domain:
  == domain 1  score: 58.7 bits;  conditional E-value: 2.1e-20
        SWIB   2 pvklspeLaellgekelsrpevvkklweYIkennLqdpedkreilcDekLkklfggkdrvkffempkllkkHl 74 
                 ++ l+ +La++l+++ ++r+e+++ +w+YIk ++Lq++++kr + cD +Lk l+++ ++ +++ +++ +++Hl
  KHJ32437.1 254 RYLLQTALADILDTDVATRAEALMGIWDYIKLMGLQEDDEKRSFECDHRLKLLLQR-EKGYIPYLADSINQHL 325
                 78899*************************************************65.7**************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3530.93
//
Query:       KHJ32438.1  [L=710]
Description: putative opt oligopeptide transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.2e-140  469.3  39.5   2.5e-140  469.1  39.5    1.0  1  OPT              OPT oligopeptide transporter protein
  ------ inclusion threshold ------
      0.056   13.4   0.1      0.056   13.4   0.1    2.6  3  Phage_holin_2_1  Bacteriophage P21 holin S


Domain annotation for each model (and alignments):
>> OPT  OPT oligopeptide transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  469.1  39.5  2.8e-144  2.5e-140       2     615 ..      50     702 ..      49     703 .. 0.89

  Alignments for each domain:
  == domain 1  score: 469.1 bits;  conditional E-value: 2.8e-144
         OPT   2 lTlRavvlGillgvlgsavnmyfglrtglvsissipaallafplgkalarilpklslnpgpftikEnvliqtmasaaatlalatglivvipalel..yg 98 
                 +TlR v++G+ +g + +++nmyfgl++g+vs +++p+al +f ++k  ++ l        pf++ Envliq++a   +t++l++gli+  pal++  + 
  KHJ32438.1  50 FTLRGVLVGLMVGSITCFSNMYFGLQSGWVSPMTMPSALMGFVFFKSISKHLDM------PFSPVENVLIQSVAGGMGTMPLGCGLIGIMPALNFmlT- 141
                 8***********************************************999988......***********************************752. PP

         OPT  99 qsag.......fgylillslsvqllGvgfagplRkflvypeklifPsglataellkalhkpegee..............................ksrl 160
                  s +        ++li++sl ++++Gv+fa+plRk+++++ekl fPsg+ata ++++lhk++  +                                ++
  KHJ32438.1 142 -SEEqgpiilsVWKLIVWSLGICFFGVVFAVPLRKQVIVREKLKFPSGTATAIMIETLHKKNIVAqtqiiddplvqygsesqsnvadnlhlrrgpQGNW 239
                 .3333577899*************************************************995556667777777777778888999999999**7777 PP

         OPT 161 kfflivflgsfvwglfplylfpalssfswltwiapknvvlanlfglgllp.ltfdwnviaayiGsglivplwvavnmliGavlswgiliPllyysngwy 258
                 k  +++++++fv++     +++++++f  + + +p+       fg  ++  +++++n+++ay G+g+i+++ ++++ml+Gav++wgil+Pl ++  gw+
  KHJ32438.1 240 KAKIRFLGIAFVFSG----IYTVITYFLPILRNIPT-------FGSTIAStWLWTVNPSPAYFGQGIIMGHTTTIHMLLGAVVGWGILSPL-AKNYGWA 326
                 777777777888542....566799999999999*9.......9*****9*****************************************.78899** PP

         OPT 259 paylpydvteildedgvldyekyigyglmllaalvallylvqfaaitllivhtilkhgkdikaalksa..........................rsprt 331
                 p++++       +e g+++++ ++++++m+ +++++l+ +   ++i   ++h  l + +++ + ++++                          ++++t
  KHJ32438.1 327 PGPVD------NWESGSKGWIMWVSLAIMFTDSIISLGFIGLSPIIRYGYFH--LPKLQKMIDYSRWKgllankicsydtkgyspimgqennigSEEIT 417
                 *****......99************************999999995555555..445555555555555799999999999988888777666533444 PP

         OPT 332 eeddrhrr.lmrkykdvpmwwylallvlslvigiivvealf.tqlpvwglllalllafllaivsaiiaGltglnpvsgigkltqlifgallpg....rp 424
                   +d h++     +  v + ++++  +ls++++i+ +++ f t +p ++++la+++a+ll+i++++++G+t+lnpvsgi+kl+ql+f++++p+    ++
  KHJ32438.1 418 LIEDDHNKpSGSMQNSVKNQTVCISGILSILLCIVSIYIAFgTLIPIYATVLAIVMALLLSIMGVRALGETDLNPVSGISKLAQLLFAIIIPSsnknSV 516
                 4444444414566667*****************************************************************************88877* PP

         OPT 425 vanlvfgavvyaaaaqagdfmqDLKtGhllkasPraqfvaqliGtlvgavvniavlkllvkaygdictadasnaftaPqakvfaavavllvggkkglpw 523
                 ++nl++ga+++a+a qagd+mqDLKtG l++a P aqf++q+iG++vgavv++++++l+ k+y+++++      f++P+ +v++++a+ lv+g+ glp 
  KHJ32438.1 517 LINLIAGAISEAGALQAGDLMQDLKTGELIGAAPDAQFWGQIIGSAVGAVVSSLIYQLYTKVYSIPGE-----LFQVPSGYVWISTAR-LVTGH-GLPE 608
                 *****************************************************************966.....***************.99999.8888 PP

         OPT 524 afl...lgavapfilllllkkfpkkstarkl.plplafavgfylppslsialligglianlwlkrrdaewakkynyvlaaGLiaGealmgviiafl 615
                 +++   l a+++f + + l+ + + + ++++ p ++a+avg+y+ ps+++++++gg+++++w+   ++ + ++  ++la+GLi+Ge++ ++++++l
  KHJ32438.1 609 MAWtwsLSAAILFTVVTTLRIIGAGKFWHPFvPGGIAVAVGMYNLPSFTLTRAVGGALSWYWKV--YKRKDESVLIILASGLILGEGVLSILNLIL 702
                 87766577777888888888766455555549*******************************9..777788999******************997 PP

>> Phage_holin_2_1  Bacteriophage P21 holin S
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   6.3e-06     0.056      36      55 ..      54      73 ..      46      77 .. 0.89
   2 ?   -3.3   0.1       1.1   9.5e+03      36      47 ..     565     576 ..     561     579 .. 0.71
   3 ?   -3.7   0.1       1.4   1.3e+04      51      59 ..     667     675 ..     664     678 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 6.3e-06
  Phage_holin_2_1 36 gvlgglvigllTyltnlYFK 55
                     gvl gl++g +T+++n+YF 
       KHJ32438.1 54 GVLVGLMVGSITCFSNMYFG 73
                     9******************6 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.1
  Phage_holin_2_1  36 gvlgglvigllT 47 
                      +v+++l+  l T
       KHJ32438.1 565 AVVSSLIYQLYT 576
                      588999888877 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 1.4
  Phage_holin_2_1  51 nlYFKrket 59 
                      ++Y+K+ + 
       KHJ32438.1 667 SWYWKVYKR 675
                      799987554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (710 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4805.33
//
Query:       KHJ32439.1  [L=401]
Description: putative trna wybutosine-synthesizing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-06   28.0   0.0    3.1e-06   27.1   0.0    1.4  1  Met_10    Met-10+ like-protein


Domain annotation for each model (and alignments):
>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   1.7e-10   3.1e-06      78     153 ..     186     269 ..     168     291 .. 0.80

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 1.7e-10
                 TTTS---GGGHHHHHHHHTT--TT-E.........EEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCE CS
      Met_10  78 vskvyfsskleaErerlaklveegev.........VvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvv 153
                     +fs+++ +E+er+ k  ++g++         Vvd++AGiG+f  +  k++ +k v++ +lnP sv+ l++    N  + +v
  KHJ32439.1 186 PRYTMFSRGNFKEKERVLKFHSHGDLnkdeisrssVVDLYAGIGYFVFSYVKMGFGK-VFGWELNPWSVEGLRRGALANGWSTRV 269
                 55679**************9998874444445555*****************88877.************999887777666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.20s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 3256.98
//
Query:       KHJ32440.1  [L=201]
Description: putative glycosyltransferase family 1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.13   12.3   0.0       0.21   11.7   0.0    1.3  1  Glyco_transf_28  Glycosyltransferase family 28 N-terminal dom


Domain annotation for each model (and alignments):
>> Glyco_transf_28  Glycosyltransferase family 28 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.1e-05      0.21       1      27 [.     171     197 ..     171     201 .] 0.87

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.1e-05
                      EEEEE-SSHHHHHHHHHHHHHHHCTT- CS
  Glyco_transf_28   1 ivllggGTgGhvfPalAlakeLkkegh 27 
                      iv++++GT+G+++ +l + k +k  ++
       KHJ32440.1 171 IVVMIIGTRGDIQSFLKIGKLFKNMDI 197
                      89**************99998887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1542.71
//
Query:       KHJ32441.1  [L=502]
Description: putative benzoate 4-monooxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-81  273.6   0.0    3.5e-81  273.3   0.0    1.0  1  p450      Cytochrome P450


Domain annotation for each model (and alignments):
>> p450  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  273.3   0.0   1.9e-85   3.5e-81       4     439 ..      36     475 ..      33     493 .. 0.91

  Alignments for each domain:
  == domain 1  score: 273.3 bits;  conditional E-value: 1.9e-85
                 ES.EHHCCHCHHHHTTTCCHHHHHHHHHHHH-SEEEEEETTEEEEEEESHHHHHHHHCTSTTTTCEESSHHHHHHHHHTTTTSSSTTCGHHHHHHHHHH CS
        p450   4 pt.plplvgnllqlgrkeelhevlrklqkkygpifrlklgskpvvvlsgpeavkevlikkgeefsgrpdeallatsrkpfkgkgvlfangekwkklRrf 101
                 +  ++  ++ llq +  + +++ ++ ++kkyg+++r+++++ +++  s   a+  v+++++   +++     ++t +  f++ +v++++  + ++++r 
  KHJ32441.1  36 FLaRFSHLWLLLQARL-GRRYQTIDAVHKKYGKLVRIQPNHVSIADDS---AIIPVYGHSNGLLKSE-----FYT-AFVFNKPNVFNTRDRDEHSHKRK 124
                 4447788999***997.889999****************987766666...*********8666665.....555.33677889999999666666666 PP

                 HHHHHTSHSTT.THHHHHHHHHHHHHHHHHCCCCHCS....EEETHHHHHHHHHHHHHHHHHSSHHHTTTSSH...........HHHHHHHHHHHHH.. CS
        p450 102 ltptltsfgkl.sleelveeeaedlveklrkkagess....elditellskaaldvigsilFgarfdlledek...........lselvkaveelss.. 182
                  +  ++s  +  ++e+++   ++ l +++++ a+e++    +ld  ++l+  a+d+ig++++g++f+ll + k           +++++ +ve l++  
  KHJ32441.1 125 PLLPIHSVASViKFEKRIAGNIQLLTRQWDRLATEANgdyaKLDCMHWLNLLAFDIIGDLTYGKSFNLLITGKdivetrntpndPPTYQPVVEVLNRrg 223
                 6666666646679**********************999*******************************99999**********99*********9999 PP

                 HHHCHHHHCCCCCHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCHCHCSCSSCSHHHHHHHHCTTCTCTSSSSHHHHHHHHHHHHHHHHHHHHHH CS
        p450 183 llskssvqllllfpllkylptkllrklkeavkklkdlldklieerretldsakksrrdfldalllakkekkgesklsdeelaatvlellfaGvdTtsst 281
                  +s++  ++ +l p +kylp+ ++r    av+ l++++ + + +r     ++   ++d l  l++++   k++ + + +el+++ l+  +aG+dTts+t
  KHJ32441.1 224 DVSATLGCFPQLLPYAKYLPDAFFRNGLTAVNHLNGIAVARVAQRCNGQANT--GEVDILTRLMQDE---KND-THDIAELVTQSLTQVIAGSDTTSNT 316
                 999***************************************9999988888..8***********6...444.68*********************** PP

                 HHHHHHHHHHSHHHHHHHHHHHHHHC.CTTTT-HHHHCCT-HHHHHHHHHHHHHSCSSTTEEEEESSS..CEEETTEEE-TT-EEEEEHHHHHT-TTTS CS
        p450 282 lswaLyeLaknPevqeklreEidevl.gdkreptyddlqklpyldavikEtLRlhpvvplllpRevtk..dvvirgylipkGtevivnlyalhrdpevf 377
                 ++ +Ly+++++P+v +kl+ E+d ++ +d + p+y++++++ yl+ vikEtLR+h+++ ++lpR+v+    v+i  +++++Gt+ +v+ y++h++pe++
  KHJ32441.1 317 SCAILYWILHTPNVLSKLQAELDAAIpEDIEIPSYEMVKDIQYLNSVIKETLRIHSTSSIGLPRVVPPgpGVTICSRHFEAGTVLSVPSYTIHHNPEIW 415
                 **************************9999*************************************9999**************************** PP

                 .SSTTS--GGGGB-TTSCTESSCTT--TTEEGGGS-TTHHHHHHHHHHHHHHHHHHEEEEEST CS
        p450 378 .pnPeeFdpeRFldekgnskrksfaflPFGaGpRnCiGerlArmelklflatlLqnFevelqp 439
                  ++ eeF peR+ + ++   r++ af+PF+ GpR+CiG++lA+m+l+l++atl+++++++l +
  KHJ32441.1 416 gEDVEEFVPERWTRLTK---RQKSAFFPFSQGPRACIGRNLAIMQLHLMIATLIRRYDFTLFS 475
                 ***************76...9**************************************9855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       469  (0.0261587); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.30s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 3363.96
//
Query:       KHJ32442.1  [L=183]
Description: putative acyl- n-acyltransferase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-11   43.8   0.0    2.9e-11   43.6   0.0    1.1  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    9.3e-10   38.5   0.0    1.3e-09   38.0   0.0    1.2  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
    1.1e-06   29.0   0.0    1.5e-06   28.5   0.0    1.2  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
      0.073   13.2   0.0       0.19   11.8   0.0    1.7  1  Acetyltransf_CG  GCN5-related N-acetyl-transferase


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.6   0.0   6.5e-15   2.9e-11      28     112 ..      60     154 ..      19     159 .. 0.72

  Alignments for each domain:
  == domain 1  score: 43.6 bits;  conditional E-value: 6.5e-15
                     HHSTTCEEEEEEET....TEEEEEEEEEEEET.......TSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTEHHHHHH CS
  Acetyltransf_1  28 fsleaegllvaeed....geliGfisllkipd.......ekggvayieslaVspeyrgkGlGsaLlealeerareegikkivlaveedndaairl 111
                       ++a + lvae d    +++iG ++ll  +        e  + ++i++++V+ +++++G+G++ +++le++a++e +  ++l v+e +  a+ +
      KHJ32442.1  60 IVDPATTSLVAE-DptqpENIIGLAQLLRGTSqeepcmkEIDKAVEIHRIYVDTNFHKRGVGTRFMNELEQIAKDESFPVVWLGVDEYHPYAQDF 153
                     222333444444.2588788*****8888888888898877789*************************************************** PP

                     H CS
  Acetyltransf_1 112 Y 112
                     Y
      KHJ32442.1 154 Y 154
                     * PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.0   0.0     3e-13   1.3e-09       9     113 ..      42     166 ..      35     176 .. 0.82

  Alignments for each domain:
  == domain 1  score: 38.0 bits;  conditional E-value: 3e-13
  Acetyltransf_10   9 gietf.kefispealrerieegealllvaeeg...gkivGviel.rdgs.............hisllfVdpeyrgqGigkaLleaveeeaekdg 84 
                      +++ f ++  + + ++++i +++++ lvae+    ++i+G ++l r +s             +i++++Vd +++++G+g++ ++++e+ a+++ 
       KHJ32442.1  42 DLKIFlEDTYNSHVISAEIVDPATTSLVAEDPtqpENIIGLAQLlRGTSqeepcmkeidkavEIHRIYVDTNFHKRGVGTRFMNELEQIAKDES 135
                      55567555555588888888999999999987555678899988777778999999999999****************************9998 PP

  Acetyltransf_10  85 ikl.eltvnasp.yavpfYeklGFkavgeeq 113
                        +  l v++ + ya++fY   G+k+vg++ 
       KHJ32442.1 136 FPVvWLGVDEYHpYAQDFYIGRGYKRVGRKP 166
                      8889999999877**************6654 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0   3.3e-10   1.5e-06       7      75 ..      69     160 ..      51     161 .. 0.72

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 3.3e-10
                     EEEET...TEEEEEEEEEEES.............TCTEEEEE-GGGTTSSHHHHHHHH.TT..SEEEEE.EEEE..THH...HHHHHHHHTTEE CS
  Acetyltransf_7   7 Vaedd...gkivGfialslld.............aeitrlaVdpeyrgkGiGraLlea.ae..kgiile.qlel..nae...kaikfYeklGFe 75 
                     Vaed    ++i+G + l +                ei+r++Vd++++++G+G++ ++  ++  k  + + +++l  + e   +a++fY   G++
      KHJ32442.1  69 VAEDPtqpENIIGLAQLLRGTsqeepcmkeidkaVEIHRIYVDTNFHKRGVGTRFMNElEQiaKD-ESFpVVWLgvD-EyhpYAQDFYIGRGYK 160
                     565556666777766655555777777777778888999*****************963223322.23456677742.23459*********98 PP

>> Acetyltransf_CG  GCN5-related N-acetyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.4e-05      0.19      22      61 ..     100     139 ..      93     142 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.4e-05
  Acetyltransf_CG  22 egvldfthTeVpeelrGkGiAkkLvkaalddareeglkvv 61 
                      ++ ++++ ++V++ +  +G++ +++++  + a++e + vv
       KHJ32442.1 100 DKAVEIHRIYVDTNFHKRGVGTRFMNELEQIAKDESFPVV 139
                      45799**********************9999999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1419.79
//
Query:       KHJ32443.1  [L=389]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       883  (0.0492498); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2948.95
//
Query:       KHJ32444.1  [L=103]
Description: putative histone h4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      8e-09   35.6   0.1    9.7e-09   35.3   0.1    1.2  1  CENP-T_C         Centromere kinetochore component CENP-T hist
    2.4e-05   24.7   0.1    2.8e-05   24.5   0.1    1.2  1  Histone          Core histone H2A/H2B/H3/H4
    7.2e-05   22.9   0.1     0.0001   22.4   0.1    1.3  1  TAF              TATA box binding protein associated factor (
     0.0002   21.6   0.1    0.00035   20.8   0.0    1.5  1  CBFD_NFYB_HMF    Histone-like transcription factor (CBF/NF-Y)
     0.0004   20.7   0.1    0.00056   20.2   0.1    1.4  1  CENP-S           CENP-S protein
     0.0085   16.2   0.0       0.01   15.9   0.0    1.1  1  TFIID-31kDa      Transcription initiation factor IID, 31kD su
  ------ inclusion threshold ------
      0.031   14.3   0.0      0.037   14.0   0.0    1.3  1  Bromo_TP         Bromodomain associated
      0.052   13.3   0.2      0.064   13.0   0.2    1.0  1  UPF0137          Uncharacterised protein family (UPF0137)
       0.11   12.5   0.0       0.12   12.3   0.0    1.1  1  HIGH_NTase1_ass  Cytidyltransferase-related C-terminal region


Domain annotation for each model (and alignments):
>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.1   4.9e-12   9.7e-09      16      79 ..      33      96 ..      18      99 .. 0.86

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 4.9e-12
    CENP-T_C 16 lakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkrqrk 79
                 a r   ++g  +++++  ++    +++ f+e v +D  +y++Ha+RKt+ + Dv+  +krq++
  KHJ32444.1 33 PAIRRLARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQGR 96
                4444444456778999**********************************************86 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.1   1.4e-08   2.8e-05      77     129 ..      40      92 ..      16      94 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 1.4e-08
                 TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHHH CS
     Histone  77 sekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlArr 129
                 +++  +risa+  +    +l+ +l+ +  +A  +++haKR+T+t+ D+  A++
  KHJ32444.1  40 RRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALK 92 
                 4677889999999999999*****************************99987 PP

>> TAF  TATA box binding protein associated factor (TAF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.1   5.3e-08    0.0001       5      66 .]      31      92 ..      27      92 .. 0.80

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 5.3e-08
                -HHHHHHHHHHTT---B-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SSB-HHHHHHHH- CS
         TAF  5 pkesvkviAeslGitnLsdeaaalLaedveyrlkeivqeaakfmrhskRqkLtvaDvdsALr 66
                +k +++ +A   G++ +s+   ++    ++  l  ++++a+ +++h+kR++ t+ Dv +AL+
  KHJ32444.1 31 TKPAIRRLARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALK 92
                55666777777777777776666666667777889*************************98 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   1.7e-07   0.00035       8      65 .]      35      91 ..      28      91 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 1.7e-07
                   HHHHHHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF  8 vkkImksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65
                   ++++ +   ++++i+    e    ++++f+e + + A+ +++++krKt++  ++  A+
     KHJ32444.1 35 IRRLARRG-GVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYAL 91
                   77777777.88888888888888899***************************98876 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.1   2.8e-07   0.00056      42      73 ..      63      94 ..      24      97 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 2.8e-07
      CENP-S 42 lenlakDLeaFakHAkRstittdDvlLlaRrn 73
                le + +D  ++ +HAkR+t+t  Dv+  ++r+
  KHJ32444.1 63 LEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQ 94
                777889999****************9998885 PP

>> TFIID-31kDa  Transcription initiation factor IID, 31kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   5.1e-06      0.01      14      70 ..      38      94 ..      31     101 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 5.1e-06
  TFIID-31kDa 14 iLaslgvteyeerVvlqLldfayrytssvLedAkvlaehakkkevslddvrlAiqsr 70
                 + +  gv+ ++  +++    +   +   v++dA ++ ehak+k+v+  dv  A++ +
   KHJ32444.1 38 LARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQ 94
                 555667777777777777788889999***********************9998865 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.8e-05     0.037      33      70 ..      56      93 ..      27      97 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.8e-05
                HHHHHHHHHHHHHHHHHHHTTSS-SS--HHHHHHHHHH CS
    Bromo_TP 33 teiaqkYirelgeqaksfaehagRseptlkDvvltLqe 70
                +++++++++ + ++a  + eha R ++t  Dvv +L++
  KHJ32444.1 56 RGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKR 93
                678999999***************************97 PP

>> UPF0137  Uncharacterised protein family (UPF0137)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.2   3.2e-05     0.064     141     212 ..      23      94 ..      18      99 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.2e-05
     UPF0137 141 lkseveslPrqavYtLasRegslekkeeiienynGetktelleiirktfPlldtdrRqknlsekllellakl 212
                 l+ +++ + + a+  La R g  +    i e+ +G  kt l  +ir  +  +++ +R++  s  ++  l++ 
  KHJ32444.1  23 LRDNIQGITKPAIRRLARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQ 94 
                 788999******************************************************999999999776 PP

>> HIGH_NTase1_ass  Cytidyltransferase-related C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   6.1e-05      0.12      69     109 ..      25      65 ..      11      92 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6.1e-05
  HIGH_NTase1_ass  69 erieGvsGtkireavvegnlekvkdmlPeetievlkeelen 109
                      + i+G++   ir+    g +++++ m+ eet  vlk +le 
       KHJ32444.1  25 DNIQGITKPAIRRLARRGGVKRISAMIYEETRGVLKTFLEG 65 
                      679*********************************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 775.61
//
Query:       KHJ32445.1  [L=596]
Description: hypothetical protein EV44_g4567 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (596 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       947  (0.0528195); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 4194.86
//
Query:       KHJ32446.1  [L=828]
Description: putative 20s cyclosome subunit (nuc2 cdc27) protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-33  113.2  21.5    4.2e-07   29.5   0.0    9.9 10  TPR_1     Tetratricopeptide repeat
      7e-31  103.8  31.6    4.3e-06   26.4   0.0   11.4 12  TPR_2     Tetratricopeptide repeat
      6e-28   96.9  30.4    1.3e-22   79.8   7.3    5.4  6  ANAPC3    Anaphase-promoting complex, cyclosome, subunit 3
    1.2e-22   78.2  26.8    0.00013   21.9   0.1   10.9 11  TPR_8     Tetratricopeptide repeat
    1.5e-20   73.3  10.5      5e-05   23.5   0.0    8.2  8  TPR_12    Tetratricopeptide repeat
    8.8e-19   66.6   6.9     0.0089   16.8   0.0    9.2 10  TPR_14    Tetratricopeptide repeat
    1.4e-14   54.3  23.1    0.00097   19.6   0.6    7.4  8  TPR_19    Tetratricopeptide repeat
    4.4e-13   48.6  19.6      0.048   14.1   0.0    9.7 10  TPR_17    Tetratricopeptide repeat
    1.9e-11   44.4  19.9    0.00025   21.6   0.1    7.8  8  TPR_16    Tetratricopeptide repeat
    2.4e-09   36.7  21.7    0.00031   20.4   0.0    8.2 11  TPR_11    TPR repeat
    7.6e-09   35.7  11.5        3.8    8.4   0.0    8.6  8  TPR_6     Tetratricopeptide repeat
      1e-07   31.4  11.5       0.28   11.3   0.0    7.9  8  TPR_7     Tetratricopeptide repeat
    1.6e-06   28.2   0.4        2.8    8.1   0.0    5.5  6  TPR_9     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.018   15.5   0.0      0.076   13.5   0.0    2.1  1  DSPn      Dual specificity protein phosphatase, N-terminal ha
      0.052   13.4   4.9        2.1    8.3   0.3    5.4  7  TPR_10    Tetratricopeptide repeat
        2.3    9.0  12.0         25    5.7   0.0    5.2  5  Sel1      Sel1 repeat


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.2       1.2   1.4e+03       9      23 ..      51      65 ..      51      65 .. 0.89
   2 ?    0.7   0.2      0.46   5.1e+02       8      26 ..      83     101 ..      83     103 .. 0.90
   3 !   16.1   0.1   6.4e-06    0.0072       5      32 ..     131     158 ..     127     159 .. 0.93
   4 ?   -3.4   0.1       9.4   1.1e+04      16      22 ..     344     350 ..     342     350 .. 0.77
   5 !    6.7   0.1    0.0061       6.8       6      33 ..     538     565 ..     534     566 .. 0.89
   6 !   29.5   0.0   3.8e-10   4.2e-07       2      34 .]     602     634 ..     601     634 .. 0.96
   7 !    7.3   0.1    0.0039       4.4       1      25 [.     635     659 ..     635     661 .. 0.93
   8 !   28.7   0.0   6.7e-10   7.5e-07       2      34 .]     670     702 ..     669     702 .. 0.97
   9 !   20.5   0.0   2.7e-07    0.0003       5      33 ..     707     735 ..     703     736 .. 0.92
  10 !    9.7   0.0    0.0007      0.78       2      33 ..     772     803 ..     771     804 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1.2
                HHHHHTT-HHHHHHH CS
       TPR_1  9 nayfklgkydeAley 23
                ++y++lg+   A ey
  KHJ32446.1 51 HCYLRLGDNASAYEY 65
                69******9999887 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.46
                 HHHHHHTT-HHHHHHHHHH CS
       TPR_1   8 GnayfklgkydeAleyyek 26 
                 ++a++ l++y+e + + ek
  KHJ32446.1  83 AQACLALERYKEGINALEK 101
                 6899*********999998 PP

  == domain 3  score: 16.1 bits;  conditional E-value: 6.4e-06
                 HHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   5 ynlGnayfklgkydeAleyyekALelnP 32 
                 + lG +y    +  +A+ y+e AL+lnP
  KHJ32446.1 131 CLLGKLYSGWDNKSKAISYFEDALKLNP 158
                 789************************9 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 9.4
                 -HHHHHH CS
       TPR_1  16 kydeAle 22 
                 +++eA+e
  KHJ32446.1 344 RFQEAIE 350
                 7889987 PP

  == domain 5  score: 6.7 bits;  conditional E-value: 0.0061
                 HHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   6 nlGnayfklgkydeAleyyekALelnPn 33 
                 ++G ay+++  y eA++ y++  ++ P+
  KHJ32446.1 538 QIGRAYYEQAAYGEAEKVYKRLRQIAPT 565
                 79******************98888775 PP

  == domain 6  score: 29.5 bits;  conditional E-value: 3.8e-10
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 +a++ lGn      ++++Al+++++A +lnP++
  KHJ32446.1 602 QAWCVLGNSWSLARDHEQALKCFKRATQLNPKF 634
                 7******************************96 PP

  == domain 7  score: 7.3 bits;  conditional E-value: 0.0039
                 HHHHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_1   1 akalynlGnayfklgkydeAleyye 25 
                 a+a+   G+ +  +++yd+Al  y+
  KHJ32446.1 635 AYAFTLQGHEHVANEEYDKALVSYR 659
                 7899999***************996 PP

  == domain 8  score: 28.7 bits;  conditional E-value: 6.7e-10
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 +a+y+ G +y klgkyd+A  +++ A  +nP+n
  KHJ32446.1 670 NAWYGVGRVYEKLGKYDKAFVHFSAATAINPTN 702
                 79*****************************98 PP

  == domain 9  score: 20.5 bits;  conditional E-value: 2.7e-07
                 HHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   5 ynlGnayfklgkydeAleyyekALelnPn 33 
                 + +G ++ k++k+ +Al+y+ +A el P 
  KHJ32446.1 707 CCIGTVLEKQKKPRQALQYFTRATELAPR 735
                 779************************96 PP

  == domain 10  score: 9.7 bits;  conditional E-value: 0.0007
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPn 33 
                  +++ lG +y  l++   A+ ++  AL l+P+
  KHJ32446.1 772 MVHFLLGKLYKCLKEKGLAVRHFTIALNLDPK 803
                 57999**************************6 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.6     0.076        85       4      23 ..      46      65 ..      43      65 .. 0.88
   2 ?    3.9   0.5     0.062        69       8      27 ..      83     102 ..      78     105 .. 0.89
   3 !   12.0   0.0   0.00016      0.18       3      32 ..     129     158 ..     127     159 .. 0.85
   4 ?   -1.9   0.1       4.6   5.1e+03      14      22 ..     342     350 ..     340     351 .. 0.80
   5 ?    0.8   0.0      0.62   6.9e+02      14      31 ..     505     522 ..     503     524 .. 0.83
   6 !   14.0   0.1   3.7e-05     0.042       6      33 ..     538     565 ..     533     566 .. 0.92
   7 !   23.3   0.0   3.8e-08   4.3e-05       1      33 [.     601     633 ..     601     634 .. 0.95
   8 ?    1.7   0.2      0.31   3.5e+02       2      24 ..     636     658 ..     635     659 .. 0.79
   9 !   26.4   0.0   3.8e-09   4.3e-06       2      34 .]     670     702 ..     669     702 .. 0.96
  10 !   16.8   0.0   4.8e-06    0.0054       5      33 ..     707     735 ..     703     736 .. 0.92
  11 ?   -2.5   0.0       6.8   7.6e+03       8      21 ..     744     757 ..     738     760 .. 0.60
  12 !   14.2   0.0   3.2e-05     0.035       2      33 ..     772     803 ..     771     804 .. 0.94

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.076
       TPR_2  4 lynlGlayyklgdyeeAlea 23
                 y l  +y++lgd + A e+
  KHJ32446.1 46 AYLLSHCYLRLGDNASAYEY 65
                699***********999886 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.062
       TPR_2   8 GlayyklgdyeeAleafekA 27 
                 ++a+++l +y+e ++a+ek+
  KHJ32446.1  83 AQACLALERYKEGINALEKS 102
                 899***************97 PP

  == domain 3  score: 12.0 bits;  conditional E-value: 0.00016
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldP 32 
                 +++ lG++y   ++  +A+ +fe Al+l+P
  KHJ32446.1 129 VNCLLGKLYSGWDNKSKAISYFEDALKLNP 158
                 667788888888899**************9 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 4.6
       TPR_2  14 lgdyeeAle 22 
                 +++++eA+e
  KHJ32446.1 342 AQRFQEAIE 350
                 689999997 PP

  == domain 5  score: 0.8 bits;  conditional E-value: 0.62
       TPR_2  14 lgdyeeAleafekAleld 31 
                 +g y+ A+  + +Al++ 
  KHJ32446.1 505 NGYYALARYQCSEALQIF 522
                 688999999999999985 PP

  == domain 6  score: 14.0 bits;  conditional E-value: 3.7e-05
       TPR_2   6 nlGlayyklgdyeeAleafekAleldPn 33 
                 ++G+ayy++  y eA++ +++  +++P+
  KHJ32446.1 538 QIGRAYYEQAAYGEAEKVYKRLRQIAPT 565
                 68************************97 PP

  == domain 7  score: 23.3 bits;  conditional E-value: 3.8e-08
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPn 33 
                 ++a++ lG+++  + d+e+Al++f++A +l+P+
  KHJ32446.1 601 PQAWCVLGNSWSLARDHEQALKCFKRATQLNPK 633
                 579*****************************7 PP

  == domain 8  score: 1.7 bits;  conditional E-value: 0.31
       TPR_2   2 ealynlGlayyklgdyeeAleaf 24 
                 +a   +G  + ++ +y++Al  +
  KHJ32446.1 636 YAFTLQGHEHVANEEYDKALVSY 658
                 56677888899999999999877 PP

  == domain 9  score: 26.4 bits;  conditional E-value: 3.8e-09
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                  a+y  G++y+klg+y++A  +f +A +++P+n
  KHJ32446.1 670 NAWYGVGRVYEKLGKYDKAFVHFSAATAINPTN 702
                 59*****************************98 PP

  == domain 10  score: 16.8 bits;  conditional E-value: 4.8e-06
       TPR_2   5 ynlGlayyklgdyeeAleafekAleldPn 33 
                 +++G +++k++++ +Al++f +A el+P+
  KHJ32446.1 707 CCIGTVLEKQKKPRQALQYFTRATELAPR 735
                 67899***********************6 PP

  == domain 11  score: -2.5 bits;  conditional E-value: 6.8
       TPR_2   8 GlayyklgdyeeAl 21 
                 ++ ++   +ye+A 
  KHJ32446.1 744 ARTLMSIAEYEKAQ 757
                 55555555666665 PP

  == domain 12  score: 14.2 bits;  conditional E-value: 3.2e-05
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPn 33 
                  +++ lG++y  l++   A+++f  Al ldP+
  KHJ32446.1 772 MVHFLLGKLYKCLKEKGLAVRHFTIALNLDPK 803
                 689****************************7 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   7.3   1.2e-25   1.3e-22       1      81 [.      21     101 ..      21     102 .. 0.98
   2 ?    6.1   0.1     0.012        13      36      81 ..     512     558 ..     503     559 .. 0.86
   3 ?    5.4   0.7     0.019        21       8      76 ..     586     655 ..     581     658 .. 0.80
   4 !   14.7   1.3   2.4e-05     0.027       4      80 ..     616     693 ..     613     695 .. 0.93
   5 !   10.8   0.1    0.0004      0.45      25      77 ..     702     758 ..     692     761 .. 0.84
   6 ?   -2.7   0.0       6.3     7e+03      37      56 ..     806     825 ..     804     828 .] 0.69

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 1.2e-25
                 HTT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3   1 dqnnyknAiflaerllaaetespedayllAlclylngqykrAyellrkaklnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 d+n ++nA+f+aer+ a++++++e+ayll+ c++++g+  +Aye+ ++a+l++ +lgc+y+fAq++l+L++y+e+i+aLek
  KHJ32446.1  21 DNNLLQNALFFAERYIAYDQRNLESAYLLSHCYLRLGDNASAYEYSKSAGLRGAHLGCAYVFAQACLALERYKEGINALEK 101
                 6899***************************************************************************98 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.012
                 TT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  36 ngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 + q  +A+++++++ ++  +s+ +   ++++++++  y eA++++++
  KHJ32446.1 512 RYQCSEALQIFNSLpRTHRESPMIMTQIGRAYYEQAAYGEAEKVYKR 558
                 4577899*******999999999999999*************99875 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.019
                 HHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHH CS
      ANAPC3   8 AiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAi 76 
                   fla  l +a+ +sp++   l+ +  l+ ++++A++ +++a +ln+k   +  l ++  ++ ++y++A+
  KHJ32446.1 586 LAFLAHELINASWKSPQAWCVLGNSWSLARDHEQALKCFKRAtQLNPKFAYAFTLQGHEHVANEEYDKAL 655
                 57899999999999999999**********************7777776666666666666667776665 PP

  == domain 4  score: 14.7 bits;  conditional E-value: 2.4e-05
                 -HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3   4 nyknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                 +++ A+ ++ r+ + +++ +++  l +  +  n++y++A+  +r     ++++ +++y  ++++ kL+ky++A  +++
  KHJ32446.1 616 DHEQALKCFKRATQLNPKFAYAFTLQGHEHVANEEYDKALVSYRFGmAADKRHYNAWYGVGRVYEKLGKYDKAFVHFS 693
                 7999*********9999999999999**************9999998999***********************98876 PP

  == domain 5  score: 10.8 bits;  conditional E-value: 0.0004
                 HHHHH...HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHH CS
      ANAPC3  25 dayll...AlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAia 77 
                 +a l    + +l ++++  +A++++ +a +l+++s   r+ +A++l  + +ye+A a
  KHJ32446.1 702 NAVLIcciGTVLEKQKKPRQALQYFTRAtELAPRSALTRFKKARTLMSIAEYEKAQA 758
                 4444333488999****************************************9965 PP

  == domain 6  score: -2.7 bits;  conditional E-value: 6.3
                 T-HHHHHHHHHCTSHHHC-H CS
      ANAPC3  37 gqykrAyellrkaklnsksl 56 
                 +q k+A+e l+  ++n++sl
  KHJ32446.1 806 QQIKEAIESLEYEDENDESL 825
                 57888888888886666665 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.7    0.0021       2.3       2      25 ..      44      67 ..      43      69 .. 0.88
   2 ?    3.8   0.2     0.072        81       5      26 ..      80     101 ..      77     102 .. 0.90
   3 !   21.9   0.1   1.2e-07   0.00013       2      32 ..     128     158 ..     127     160 .. 0.93
   4 ?    6.1   0.1     0.013        15       5      32 ..     537     564 ..     535     566 .. 0.86
   5 !   12.8   0.0   9.3e-05       0.1       2      33 ..     602     633 ..     601     634 .. 0.91
   6 ?   -0.7   0.1         2   2.2e+03       3      25 ..     637     659 ..     635     659 .. 0.82
   7 !   18.9   0.0   1.1e-06    0.0012       2      34 .]     670     702 ..     669     702 .. 0.95
   8 !    9.1   0.0    0.0015       1.7       7      32 ..     709     734 ..     707     736 .. 0.94
   9 ?    2.0   0.1      0.28   3.1e+02       5      24 ..     741     760 ..     737     769 .. 0.84
  10 ?    4.3   0.0      0.05        56       4      33 ..     774     803 ..     773     804 .. 0.94
  11 ?   -2.7   0.0         9     1e+04      16      25 ..     807     816 ..     805     816 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0021
                CHHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_8  2 eayynlgsiylklgdyeeAkeyye 25
                e+ y+l+++yl lgd  +A ey +
  KHJ32446.1 44 ESAYLLSHCYLRLGDNASAYEYSK 67
                6789***************99965 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.072
                 HHHHHHHHHTT-HHHHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyyek 26 
                 y  ++++l l++y+e + ++ek
  KHJ32446.1  80 YVFAQACLALERYKEGINALEK 101
                 56799****************9 PP

  == domain 3  score: 21.9 bits;  conditional E-value: 1.2e-07
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldp 32 
                  + ++lg++y+   ++ +A++y+e al+l+p
  KHJ32446.1 128 AVNCLLGKLYSGWDNKSKAISYFEDALKLNP 158
                 5789**************************9 PP

  == domain 4  score: 6.1 bits;  conditional E-value: 0.013
                 HHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyyekaleldp 32 
                  ++g++y ++  y eA+++y++  +++p
  KHJ32446.1 537 TQIGRAYYEQAAYGEAEKVYKRLRQIAP 564
                 689*****************99766665 PP

  == domain 5  score: 12.8 bits;  conditional E-value: 9.3e-05
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 +a++ lg+  +   d+e+A +++++a++l+p+
  KHJ32446.1 602 QAWCVLGNSWSLARDHEQALKCFKRATQLNPK 633
                 68999999999999*****************8 PP

  == domain 6  score: -0.7 bits;  conditional E-value: 2
                 HHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyye 25 
                 a  + g+ +   ++y++A  +y+
  KHJ32446.1 637 AFTLQGHEHVANEEYDKALVSYR 659
                 66778999999999**9988885 PP

  == domain 7  score: 18.9 bits;  conditional E-value: 1.1e-06
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                  a+y  g++y+klg+y++A   +  a+ ++p+n
  KHJ32446.1 670 NAWYGVGRVYEKLGKYDKAFVHFSAATAINPTN 702
                 69****************************986 PP

  == domain 8  score: 9.1 bits;  conditional E-value: 0.0015
                 HHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   7 lgsiylklgdyeeAkeyyekaleldp 32 
                 +g +++k+++  +A +y+ +a+el+p
  KHJ32446.1 709 IGTVLEKQKKPRQALQYFTRATELAP 734
                 68899********************9 PP

  == domain 9  score: 2.0 bits;  conditional E-value: 0.28
                 HHHHHHHHHTT-HHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyy 24 
                 +++++++++  +ye+A++ +
  KHJ32446.1 741 FKKARTLMSIAEYEKAQAEL 760
                 78999999999999999876 PP

  == domain 10  score: 4.3 bits;  conditional E-value: 0.05
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAkeyyekaleldpd 33 
                 +++lg++y+ l+++  A+  +  al ldp+
  KHJ32446.1 774 HFLLGKLYKCLKEKGLAVRHFTIALNLDPK 803
                 799*************************97 PP

  == domain 11  score: -2.7 bits;  conditional E-value: 9
                 -HHHHHHHHH CS
       TPR_8  16 dyeeAkeyye 25 
                 +++eA+e++e
  KHJ32446.1 807 QIKEAIESLE 816
                 7899***987 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.5      0.12   1.3e+02       5      26 ..      46      66 ..      24      69 .. 0.66
   2 !    7.6   0.0    0.0042       4.7       9      40 ..      82     110 ..      76     118 .. 0.85
   3 !   10.6   0.0   0.00049      0.55      44      74 ..     126     156 ..     122     158 .. 0.90
   4 !   19.1   0.2   1.1e-06    0.0012      19      75 ..     508     563 ..     503     565 .. 0.91
   5 ?    4.2   0.0     0.047        53      58      74 ..     614     630 ..     602     633 .. 0.72
   6 !   23.5   0.0   4.5e-08     5e-05       4      76 ..     670     734 ..     668     735 .. 0.93
   7 !   12.5   0.0   0.00012      0.14       9      52 ..     709     751 ..     700     759 .. 0.61
   8 ?    2.8   0.0      0.13   1.5e+02      42      75 ..     768     801 ..     736     803 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.12
      TPR_12  5 alnnlaavlrrlgrydeAlell 26
                a+  l ++++rlg+ + A e+ 
  KHJ32446.1 46 AY-LLSHCYLRLGDNASAYEYS 66
                33.6666666666666666654 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0042
      TPR_12   9 laavlrrlgrydeAlellekaleiarrllGpd 40 
                  a+++++l+ry e +  lek+++++   lG++
  KHJ32446.1  82 FAQACLALERYKEGINALEKSRNLW---LGKN 110
                 689999******************9...6666 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00049
      TPR_12  44 tattlrnLgrlyralgryeeAlelleealai 74 
                 +a++ + Lg ly+ +++  +A++++e+al++
  KHJ32446.1 126 AAAVNCLLGKLYSGWDNKSKAISYFEDALKL 156
                 6778889**********************87 PP

  == domain 4  score: 19.1 bits;  conditional E-value: 1.1e-06
      TPR_12  19 ydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                 y+ A+  + +al+i+++l+  +h +   ++  +gr+y+++  y eA++ +++  +ia
  KHJ32446.1 508 YALARYQCSEALQIFNSLP-RTHRESPMIMTQIGRAYYEQAAYGEAEKVYKRLRQIA 563
                 8899999********9886.6788****************************99987 PP

  == domain 5  score: 4.2 bits;  conditional E-value: 0.047
      TPR_12  58 lgryeeAlelleealai 74 
                 + ++e+Al+ +++a+++
  KHJ32446.1 614 ARDHEQALKCFKRATQL 630
                 55788888888888776 PP

  == domain 6  score: 23.5 bits;  conditional E-value: 4.5e-08
      TPR_12   4 talnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaiae 76 
                 +a++ ++ v+ +lg+yd+A+ ++ +a +i      p++   a   + +g+++++++++++Al+++++a+++a+
  KHJ32446.1 670 NAWYGVGRVYEKLGKYDKAFVHFSAATAIN-----PTN---AVLICCIGTVLEKQKKPRQALQYFTRATELAP 734
                 57889*********************8888.....887...999999***********************986 PP

  == domain 7  score: 12.5 bits;  conditional E-value: 0.00012
      TPR_12   9 laavlrrlgrydeAlellekaleia.rrllGpdhpltattlrnLg 52 
                 +++vl ++++  +Al+++ +a e+a r++   ++   a+tl  ++
  KHJ32446.1 709 IGTVLEKQKKPRQALQYFTRATELApRSA--LTRFKKARTLMSIA 751
                 66666777777777777777766665555..33444666665555 PP

  == domain 8  score: 2.8 bits;  conditional E-value: 0.13
      TPR_12  42 pltattlrnLgrlyralgryeeAlelleealaia 75 
                 p++a + + Lg ly  l++   A+++++ al+++
  KHJ32446.1 768 PEEAMVHFLLGKLYKCLKEKGLAVRHFTIALNLD 801
                 6789999*******************99888876 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0       1.5   1.6e+03       4      23 ..      46      65 ..      43      69 .. 0.84
   2 ?    2.8   0.1      0.25   2.7e+02       8      26 ..      83     101 ..      78     106 .. 0.89
   3 ?    2.9   0.0      0.23   2.6e+02      19      35 ..     145     161 ..     139     169 .. 0.82
   4 !    8.8   0.0    0.0029       3.3       6      34 ..     538     566 ..     534     570 .. 0.91
   5 ?   -0.0   0.0         2   2.2e+03      11      42 ..     577     608 ..     575     610 .. 0.87
   6 !   12.3   0.0   0.00022      0.25       2      37 ..     602     637 ..     601     643 .. 0.86
   7 !   16.8   0.0   7.9e-06    0.0089       2      37 ..     670     705 ..     670     708 .. 0.94
   8 !   14.4   0.0   4.5e-05      0.05       7      43 ..     709     745 ..     705     746 .. 0.93
   9 ?   -1.7   0.0       6.6   7.4e+03      30      44 .]     766     780 ..     750     780 .. 0.76
  10 ?   -1.1   0.0       4.5     5e+03       5      34 ..     775     804 ..     771     811 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 1.5
      TPR_14  4 llalaeallalGdpdeAial 23
                 ++l + +l+lGd + A ++
  KHJ32446.1 46 AYLLSHCYLRLGDNASAYEY 65
                6788999*********9986 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.25
      TPR_14   8 aeallalGdpdeAiallrr 26 
                 a+a+lal++++e i++l++
  KHJ32446.1  83 AQACLALERYKEGINALEK 101
                 89***************97 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.23
      TPR_14  19 eAiallrralalaPdda 35 
                 +Ai ++++al+l+P  +
  KHJ32446.1 145 KAISYFEDALKLNPFIW 161
                 89***********9554 PP

  == domain 4  score: 8.8 bits;  conditional E-value: 0.0029
      TPR_14   6 alaeallalGdpdeAiallrralalaPdd 34 
                 ++++a++++  + eA+++++r+ + aP+ 
  KHJ32446.1 538 QIGRAYYEQAAYGEAEKVYKRLRQIAPTR 566
                 5799********************99975 PP

  == domain 5  score: -0.0 bits;  conditional E-value: 2
      TPR_14  11 llalGdpdeAiallrralalaPddaeawllla 42 
                 l++l +  + + l+++++ + +++++aw  l+
  KHJ32446.1 577 LWHLKRETDLAFLAHELINASWKSPQAWCVLG 608
                 78888888889999999999********9987 PP

  == domain 6  score: 12.3 bits;  conditional E-value: 0.00022
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaea 37 
                 +a+  l+     ++d+++A+++++ra +l+P++a a
  KHJ32446.1 602 QAWCVLGNSWSLARDHEQALKCFKRATQLNPKFAYA 637
                 6777888888899*******************9866 PP

  == domain 7  score: 16.8 bits;  conditional E-value: 7.9e-06
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaea 37 
                 +a++  +++++ lG++d+A  ++ +a a +P++a++
  KHJ32446.1 670 NAWYGVGRVYEKLGKYDKAFVHFSAATAINPTNAVL 705
                 59******************************9975 PP

  == domain 8  score: 14.4 bits;  conditional E-value: 4.5e-05
      TPR_14   7 laeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 ++ +l+ + +p++A++++ ra +laP +a +++  a+
  KHJ32446.1 709 IGTVLEKQKKPRQALQYFTRATELAPRSALTRFKKAR 745
                 67899***************************99987 PP

  == domain 9  score: -1.7 bits;  conditional E-value: 6.6
      TPR_14  30 laPddaeawlllaql 44 
                  aP++a +++ll++l
  KHJ32446.1 766 IAPEEAMVHFLLGKL 780
                 589999999999986 PP

  == domain 10  score: -1.1 bits;  conditional E-value: 4.5
      TPR_14   5 lalaeallalGdpdeAiallrralalaPdd 34 
                  +l++++  l +   A++++  al l+P+ 
  KHJ32446.1 775 FLLGKLYKCLKEKGLAVRHFTIALNLDPKA 804
                 6789999999999999****9999999975 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   1.0   0.00012      0.14       4      44 ..      22      62 ..      19      65 .. 0.90
   2 !    7.1   0.5    0.0067       7.5       5      50 ..      57     101 ..      57     104 .. 0.84
   3 ?   -2.2   0.0       5.4   6.1e+03       9      22 ..     145     158 ..     144     167 .. 0.90
   4 !    7.0   0.0    0.0073       8.1       2      56 ..     510     564 ..     509     568 .. 0.89
   5 !    6.9   0.0    0.0081       9.1       4      28 ..     614     638 ..     613     641 .. 0.89
   6 !   13.2   0.0   8.8e-05     0.099       3      44 ..     647     688 ..     645     704 .. 0.88
   7 !   19.6   0.6   8.6e-07   0.00097       3      68 .]     715     780 ..     713     780 .. 0.94
   8 ?   -2.9   0.1       9.5   1.1e+04      38      49 ..     805     816 ..     804     823 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00012
      TPR_19  4 egdyaeAlalleqalqedpknaearllLAeallalgqldeA 44
                ++ +++Al + e+ +++d  n+e ++lL  ++l lg+ + A
  KHJ32446.1 22 NNLLQNALFFAERYIAYDQRNLESAYLLSHCYLRLGDNASA 62
                55689*******************************98887 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0067
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAealLda 50 
                 gd a+A ++ ++a      ++  ++  A+a+lal +++e +++L++
  KHJ32446.1  57 GDNASAYEYSKSA-GLRGAHLGCAYVFAQACLALERYKEGINALEK 101
                 6777778888886.667889999999*************9999986 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 5.4
      TPR_19   9 eAlalleqalqedp 22 
                  A++++e al+ +p
  KHJ32446.1 145 KAISYFEDALKLNP 158
                 599*******9998 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.0073
      TPR_19   2 laegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedp 56 
                 la+ +  eAl+++ ++     +++ +  +  +a++++  + eAe++ ++l + +p
  KHJ32446.1 510 LARYQCSEALQIFNSLPRTHRESPMIMTQIGRAYYEQAAYGEAEKVYKRLRQIAP 564
                 6777778999999999999999**************************9987766 PP

  == domain 5  score: 6.9 bits;  conditional E-value: 0.0081
      TPR_19   4 egdyaeAlalleqalqedpknaear 28 
                 + d+++Al+ +++a q +pk a+a 
  KHJ32446.1 614 ARDHEQALKCFKRATQLNPKFAYAF 638
                 579*****************99886 PP

  == domain 6  score: 13.2 bits;  conditional E-value: 8.8e-05
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAeallalgqldeA 44 
                 a++ y+ Al  ++  +++d  + +a+++  +++ +lg +d+A
  KHJ32446.1 647 ANEEYDKALVSYRFGMAADKRHYNAWYGVGRVYEKLGKYDKA 688
                 7899*************************************9 PP

  == domain 7  score: 19.6 bits;  conditional E-value: 8.6e-07
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddaryasLlAkl 68 
                 +++++ +Al+++++a + +p +a  r   A+ l++  ++++A+a L  l + +p +a ++ Ll+kl
  KHJ32446.1 715 KQKKPRQALQYFTRATELAPRSALTRFKKARTLMSIAEYEKAQAELMILKNIAPEEAMVHFLLGKL 780
                 6899******************************************99999999999998888776 PP

  == domain 8  score: -2.9 bits;  conditional E-value: 9.5
      TPR_19  38 lgqldeAealLd 49 
                 + q++eA++ L+
  KHJ32446.1 805 SQQIKEAIESLE 816
                 456677776664 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.6    0.0046       5.1       2      32 ..      32      62 ..      31      64 .. 0.91
   2 ?    1.0   0.0      0.61   6.9e+02       1      18 [.     149     166 ..     149     167 .. 0.85
   3 ?   -0.5   0.0       1.8   2.1e+03       5      24 ..     496     515 ..     494     522 .. 0.85
   4 ?   -2.7   0.0       9.6   1.1e+04      14      33 ..     534     553 ..     531     554 .. 0.75
   5 ?    4.0   0.0     0.068        76       6      33 ..     594     621 ..     592     622 .. 0.87
   6 ?    4.9   0.1     0.036        40       1      32 [.     623     654 ..     623     655 .. 0.85
   7 !    7.2   0.0    0.0067       7.5       7      32 ..     663     688 ..     661     689 .. 0.91
   8 !   14.1   0.0   4.3e-05     0.048       4      34 .]     694     724 ..     691     724 .. 0.92
   9 !    9.5   0.0    0.0012       1.3       1      33 [.     725     757 ..     725     758 .. 0.95
  10 ?    3.8   0.0     0.079        88      10      32 ..     768     790 ..     763     792 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0046
      TPR_17  2 ylkaleldPnnadaynnLAelllknGdlmtA 32
                 ++ +++d  n ++ ++L  ++l++Gd + A
  KHJ32446.1 32 AERYIAYDQRNLESAYLLSHCYLRLGDNASA 62
                6899***********************8876 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.61
      TPR_17   1 lylkaleldPnnadaynn 18 
                 +++ al+l+P  +da++ 
  KHJ32446.1 149 YFEDALKLNPFIWDAFTS 166
                 589*******99999875 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 1.8
      TPR_17   5 aleldPnnadaynnLAelll 24 
                  lel ++  + y+ LA++++
  KHJ32446.1 496 LLELSKKIGNGYYALARYQC 515
                 68999999999*****9876 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 9.6
      TPR_17  14 daynnLAelllknGdlmtAr 33 
                   +++ +++++++  +++A+
  KHJ32446.1 534 MIMTQIGRAYYEQAAYGEAE 553
                 67888999999887777776 PP

  == domain 5  score: 4.0 bits;  conditional E-value: 0.068
      TPR_17   6 leldPnnadaynnLAelllknGdlmtAr 33 
                 +    +++ a++ L++ ++ + d+++A+
  KHJ32446.1 594 INASWKSPQAWCVLGNSWSLARDHEQAL 621
                 56677899*****************997 PP

  == domain 6  score: 4.9 bits;  conditional E-value: 0.036
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtA 32 
                 ++++a +l+P+ a+a+++ +  +  n ++++A
  KHJ32446.1 623 CFKRATQLNPKFAYAFTLQGHEHVANEEYDKA 654
                 79*************99988877777777777 PP

  == domain 7  score: 7.2 bits;  conditional E-value: 0.0067
      TPR_17   7 eldPnnadaynnLAelllknGdlmtA 32 
                 + d+ + +a++  +++++k+G++++A
  KHJ32446.1 663 AADKRHYNAWYGVGRVYEKLGKYDKA 688
                 5688899*****************98 PP

  == domain 8  score: 14.1 bits;  conditional E-value: 4.3e-05
      TPR_17   4 kaleldPnnadaynnLAelllknGdlmtArq 34 
                  a +++P+na++ +  +++l+k++++++A+q
  KHJ32446.1 694 AATAINPTNAVLICCIGTVLEKQKKPRQALQ 724
                 68899************************97 PP

  == domain 9  score: 9.5 bits;  conditional E-value: 0.0012
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtAr 33 
                 ++++a el P +a   + +A++l ++ ++++A+
  KHJ32446.1 725 YFTRATELAPRSALTRFKKARTLMSIAEYEKAQ 757
                 589****************************98 PP

  == domain 10  score: 3.8 bits;  conditional E-value: 0.079
      TPR_17  10 PnnadaynnLAelllknGdlmtA 32 
                 P  a ++++L++l++ +++++ A
  KHJ32446.1 768 PEEAMVHFLLGKLYKCLKEKGLA 790
                 8889**********977766655 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.4     0.049        55      20      53 ..      32      62 ..      15      70 .. 0.88
   2 ?    0.4   0.2      0.97   1.1e+03      41      57 ..      83     100 ..      73     105 .. 0.84
   3 ?    1.6   0.0      0.42   4.7e+02      15      36 ..     145     163 ..     141     167 .. 0.86
   4 !    7.6   0.1    0.0054       6.1      36      65 ..     535     564 ..     504     566 .. 0.66
   5 ?    3.4   0.1      0.11   1.3e+02      10      32 ..     614     633 ..     613     638 .. 0.85
   6 !   21.6   0.1   2.2e-07   0.00025       3      67 ..     641     702 ..     639     703 .. 0.93
   7 !   11.5   0.1   0.00032      0.36       4      52 ..     710     755 ..     709     765 .. 0.82
   8 ?    0.1   0.0       1.2   1.3e+03      27      66 ..     767     803 ..     741     805 .. 0.68

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.049
      TPR_16 20 leaalkrdpssPdaaeAllllgdaalrqgrlaeA 53
                +e+++++d    ++ e+++ll  ++lr+g+ a A
  KHJ32446.1 32 AERYIAYD---QRNLESAYLLSHCYLRLGDNASA 62
                689999**...*******************9987 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.97
      TPR_16  41 gdaalrqgrlaeAa.aly 57 
                 ++a+l++ r++e + al 
  KHJ32446.1  83 AQACLALERYKEGInALE 100
                 89999*******997775 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.42
      TPR_16  15 dAaaaleaalkrdpssPdaaeA 36 
                 +A+ ++e alk++   P+ ++A
  KHJ32446.1 145 KAISYFEDALKLN---PFIWDA 163
                 6999*********...987777 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.0054
      TPR_16  36 AllllgdaalrqgrlaeAaalyraalraap 65 
                  +   g+a+++q  + eA+ +y+++ + ap
  KHJ32446.1 535 IMTQIGRAYYEQAAYGEAEKVYKRLRQIAP 564
                 555667777777777777777777777766 PP

  == domain 5  score: 3.4 bits;  conditional E-value: 0.11
      TPR_16  10 agdyddAaaaleaalkrdpssPd 32 
                 a+d ++A++ +++a+ ++   P 
  KHJ32446.1 614 ARDHEQALKCFKRATQLN---PK 633
                 6899***********999...65 PP

  == domain 6  score: 21.6 bits;  conditional E-value: 2.2e-07
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapda 67 
                 ++++++++ +yd+A+  ++   ++d    +++ A+++ g+++ ++g +++A   + aa +  p +
  KHJ32446.1 641 QGHEHVANEEYDKALVSYRFGMAAD---KRHYNAWYGVGRVYEKLGKYDKAFVHFSAATAINPTN 702
                 89***********************...99999******************99999998887765 PP

  == domain 7  score: 11.5 bits;  conditional E-value: 0.00032
      TPR_16   4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlae 52 
                 ++ + +++++++A+ ++++a++++   P+ a  ++ +++ +    ++++
  KHJ32446.1 710 GTVLEKQKKPRQALQYFTRATELA---PRSALTRFKKARTLMSIAEYEK 755
                 677899******************...9888888888877766655555 PP

  == domain 8  score: 0.1 bits;  conditional E-value: 1.2
      TPR_16  27 dpssPdaaeAllllgdaalrqgrlaeAaalyraalraapd 66 
                 +   P+ a  ++llg ++  +++  +A+  +  al  +p+
  KHJ32446.1 767 A---PEEAMVHFLLGKLYKCLKEKGLAVRHFTIALNLDPK 803
                 3...999999999999998777777777777777766665 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       3.6     4e+03      13      22 ..      88      97 ..      84     101 .. 0.72
   2 ?   -2.7   0.1       4.4     5e+03      26      38 ..     125     137 ..     124     138 .. 0.85
   3 ?   -3.6   0.0       8.3   9.3e+03      13      25 ..     146     158 ..     145     158 .. 0.74
   4 ?    4.5   0.7     0.024        27       1      25 [.     540     564 ..     540     568 .. 0.87
   5 !   14.3   0.0   2.1e-05     0.024      10      31 ..     617     638 ..     616     640 .. 0.92
   6 !   11.5   0.2   0.00017      0.19       1      42 []     642     683 ..     642     683 .. 0.97
   7 !   20.4   0.0   2.8e-07   0.00031       1      41 [.     676     716 ..     676     717 .. 0.95
   8 ?   -2.5   0.0       3.8   4.3e+03      13      33 ..     722     742 ..     721     747 .. 0.73
   9 ?    1.1   0.0      0.29   3.2e+02      23      38 ..     766     781 ..     749     783 .. 0.82
  10 ?   -2.9   0.0       5.1   5.7e+03      20      26 ..     797     803 ..     790     806 .. 0.78
  11 ?   -2.0   0.0       2.7   3.1e+03       7      17 ..     805     815 ..     803     816 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.6
      TPR_11 13 AieaYkkAlk 22
                A+e+Yk+ ++
  KHJ32446.1 88 ALERYKEGIN 97
                7777777664 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 4.4
      TPR_11  26 dnaeayynLGlay 38 
                 d a + + LG++y
  KHJ32446.1 125 DAAAVNCLLGKLY 137
                 67889999**999 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 8.3
      TPR_11  13 AieaYkkAlkldP 25 
                 Ai  ++ Alkl+P
  KHJ32446.1 146 AISYFEDALKLNP 158
                 5666677999998 PP

  == domain 4  score: 4.5 bits;  conditional E-value: 0.024
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldP 25 
                 G+ayyeq  y eA ++Yk+  ++ P
  KHJ32446.1 540 GRAYYEQAAYGEAEKVYKRLRQIAP 564
                 99****************9766665 PP

  == domain 5  score: 14.3 bits;  conditional E-value: 2.1e-05
      TPR_11  10 yeeAieaYkkAlkldPdnaeay 31 
                  e+A++++k+A +l+P++a a+
  KHJ32446.1 617 HEQALKCFKRATQLNPKFAYAF 638
                 79*****************986 PP

  == domain 6  score: 11.5 bits;  conditional E-value: 0.00017
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykqG 42 
                 G++ ++  +y++A+ +Y+   + d    +a+y+ G +y k+G
  KHJ32446.1 642 GHEHVANEEYDKALVSYRFGMAADKRHYNAWYGVGRVYEKLG 683
                 889999**********************************99 PP

  == domain 7  score: 20.4 bits;  conditional E-value: 2.8e-07
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykq 41 
                 G++y ++Gky++A  ++++A +++P+na + +++G ++ kq
  KHJ32446.1 676 GRVYEKLGKYDKAFVHFSAATAINPTNAVLICCIGTVLEKQ 716
                 88999******************************999998 PP

  == domain 8  score: -2.5 bits;  conditional E-value: 3.8
      TPR_11  13 AieaYkkAlkldPdnaeayyn 33 
                 A++ + +A +l P +a   ++
  KHJ32446.1 722 ALQYFTRATELAPRSALTRFK 742
                 677777889998888876665 PP

  == domain 9  score: 1.1 bits;  conditional E-value: 0.29
      TPR_11  23 ldPdnaeayynLGlay 38 
                 + P+ a +++ LG++y
  KHJ32446.1 766 IAPEEAMVHFLLGKLY 781
                 66888999999**999 PP

  == domain 10  score: -2.9 bits;  conditional E-value: 5.1
      TPR_11  20 AlkldPd 26 
                 Al+ldP+
  KHJ32446.1 797 ALNLDPK 803
                 9*****7 PP

  == domain 11  score: -2.0 bits;  conditional E-value: 2.7
      TPR_11   7 qGkyeeAieaY 17 
                  ++++eAie++
  KHJ32446.1 805 SQQIKEAIESL 815
                 67999***986 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1      0.44     5e+02       2      22 ..      45      65 ..      44      68 .. 0.86
   2 ?    2.3   0.0      0.28   3.2e+02       7      31 ..     134     158 ..     132     158 .. 0.76
   3 ?    0.1   0.0       1.4   1.6e+03       6      29 ..     503     528 ..     502     532 .. 0.69
   4 !    8.0   0.6    0.0045       5.1       5      31 ..     538     564 ..     536     565 .. 0.92
   5 ?    4.1   0.0     0.077        86       7      32 ..     608     633 ..     607     633 .. 0.81
   6 !    8.1   0.0    0.0041       4.6       2      28 ..     671     697 ..     670     702 .. 0.81
   7 !    8.4   0.0    0.0033       3.8       6      33 .]     709     736 ..     709     736 .. 0.92
   8 ?   -1.5   0.1       4.7   5.3e+03       4      31 ..     741     768 ..     739     769 .. 0.74

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.44
                HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6  2 AlyklalsyrklgdtdkAlea 22
                + y+l  +y++lgd + A e+
  KHJ32446.1 45 SAYLLSHCYLRLGDNASAYEY 65
                5699999****99*9999875 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.28
                 HHHHHH.HHHHHHHHHHHHHHHHH-T CS
       TPR_6   7 alsyrk.lgdtdkAlealerlikeYP 31 
                 +++y     +++kA+ ++e+ +k  P
  KHJ32446.1 134 GKLYSGwD-NKSKAISYFEDALKLNP 158
                 55555444.899********999877 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHH..HHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtd..kAlealerlike 29 
                 ++  y++l +++  +Al+++++l + 
  KHJ32446.1 503 IGNGYYALARYQcsEALQIFNSLPRT 528
                 666677743555559*****999765 PP

  == domain 4  score: 8.0 bits;  conditional E-value: 0.0045
                 HHHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   5 klalsyrklgdtdkAlealerlikeYP 31 
                 +++++y+++  + +A + ++rl++  P
  KHJ32446.1 538 QIGRAYYEQAAYGEAEKVYKRLRQIAP 564
                 79******88*************9888 PP

  == domain 5  score: 4.1 bits;  conditional E-value: 0.077
                 HHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   7 alsyrklgdtdkAlealerlikeYPd 32 
                 + s   + d+++Al+ ++r  +  P+
  KHJ32446.1 608 GNSWSLARDHEQALKCFKRATQLNPK 633
                 55666667************999885 PP

  == domain 6  score: 8.1 bits;  conditional E-value: 0.0041
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAlealerlik 28 
                 A y  ++ y+klg++dkA   +     
  KHJ32446.1 671 AWYGVGRVYEKLGKYDKAFVHFSAATA 697
                 89****************877766655 PP

  == domain 7  score: 8.4 bits;  conditional E-value: 0.0033
                 HHHHHHHHHHHHHHHHHHHHHHHH-TT- CS
       TPR_6   6 lalsyrklgdtdkAlealerlikeYPdS 33 
                 ++  ++k++++++Al+++ r  +  P S
  KHJ32446.1 709 IGTVLEKQKKPRQALQYFTRATELAPRS 736
                 6888999****************99987 PP

  == domain 8  score: -1.5 bits;  conditional E-value: 4.7
                 HHHHHHHHH.HHHHHHHHHHHHHHHHH-T CS
       TPR_6   4 yklalsyrk.lgdtdkAlealerlikeYP 31 
                 +k a+ + + + +++kA + l  l +  P
  KHJ32446.1 741 FKKARTLMSiA-EYEKAQAELMILKNIAP 768
                 77788888866.99999988777766655 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.2      0.78   8.7e+02       4      21 ..      48      65 ..      45      69 .. 0.87
   2 ?    4.4   0.0      0.04        45       4      31 ..     132     157 ..     131     160 .. 0.76
   3 ?    4.5   0.1     0.036        40       4      24 ..     538     558 ..     536     569 .. 0.86
   4 !   11.3   0.0   0.00025      0.28       1      28 [.     603     628 ..     603     636 .. 0.89
   5 ?    5.9   0.0     0.013        15       4      18 ..     674     688 ..     671     692 .. 0.88
   6 ?    3.7   0.0     0.066        74       6      33 ..     710     735 ..     708     738 .. 0.81
   7 ?   -2.9   0.0       8.6   9.6e+03       6      18 ..     744     756 ..     743     757 .. 0.88
   8 ?   -1.7   0.0       3.6     4e+03       3      29 ..     775     801 ..     773     818 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.78
       TPR_7  4 nLarlysrlGdyeeAiel 21
                 L ++y rlGd + A e+
  KHJ32446.1 48 LLSHCYLRLGDNASAYEY 65
                57889******9999887 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.04
       TPR_7   4 nLarlysrlGdyeeAielyeqsLaltkd 31 
                  L+ lys   + ++Ai+++e   al   
  KHJ32446.1 132 LLGKLYSGWDNKSKAISYFED--ALKLN 157
                 6777777778889********..66555 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.036
       TPR_7   4 nLarlysrlGdyeeAielyeq 24 
                 +++r+y ++  y eA+++y++
  KHJ32446.1 538 QIGRAYYEQAAYGEAEKVYKR 558
                 68******************9 PP

  == domain 4  score: 11.3 bits;  conditional E-value: 0.00025
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLal 28 
                 a++ L++ +s  +d+e+A++++++  a+
  KHJ32446.1 603 AWCVLGNSWSLARDHEQALKCFKR--AT 628
                 6889********************..65 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.013
       TPR_7   4 nLarlysrlGdyeeA 18 
                   +r+y++lG+y++A
  KHJ32446.1 674 GVGRVYEKLGKYDKA 688
                 569***********9 PP

  == domain 6  score: 3.7 bits;  conditional E-value: 0.066
       TPR_7   6 arlysrlGdyeeAielyeqsLaltkdpe 33 
                 + + +++ + ++A++++++  a++ +p 
  KHJ32446.1 710 GTVLEKQKKPRQALQYFTR--ATELAPR 735
                 56677888999********..9988775 PP

  == domain 7  score: -2.9 bits;  conditional E-value: 8.6
       TPR_7   6 arlysrlGdyeeA 18 
                 ar+  +  +ye+A
  KHJ32446.1 744 ARTLMSIAEYEKA 756
                 789999999**99 PP

  == domain 8  score: -1.7 bits;  conditional E-value: 3.6
       TPR_7   3 lnLarlysrlGdyeeAielyeqsLalt 29 
                 + L+ ly  l +   A+++++ +L l+
  KHJ32446.1 775 FLLGKLYKCLKEKGLAVRHFTIALNLD 801
                 567888877777777888888844443 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       5.7   6.3e+03      10      48 ..      24      62 ..      18      67 .. 0.52
   2 ?   -0.8   0.0       1.6   1.8e+03      36      60 ..     134     158 ..     129     165 .. 0.88
   3 ?   -0.7   0.1       1.4   1.6e+03       6      49 ..     510     553 ..     507     569 .. 0.73
   4 ?    4.7   0.0     0.029        33       8      31 ..     614     637 ..     609     663 .. 0.79
   5 !    8.1   0.0    0.0025       2.8       5      62 ..     645     702 ..     641     705 .. 0.88
   6 !    7.7   0.0    0.0035       3.9       5      52 ..     713     760 ..     709     778 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 5.7
       TPR_9 10 dweralavverllllaPddpeerrdRGlllaqlGclsaA 48
                  + al  +er ++ + +  e  +    ++ +lG+ + A
  KHJ32446.1 24 LLQNALFFAERYIAYDQRNLESAYLLSHCYLRLGDNASA 62
                555555555555555555555555555555555554444 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.6
       TPR_9  36 GlllaqlGclsaAladLeaylalap 60 
                 G l+  +++ s+A+  +e +l l+p
  KHJ32446.1 134 GKLYSGWDNKSKAISYFEDALKLNP 158
                 7789999999**********99988 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 1.4
       TPR_9   6 ireedweralavverllllaPddpeerrdRGlllaqlGclsaAl 49 
                 + + + ++al++ ++l   + ++p      G++++++ ++ +A 
  KHJ32446.1 510 LARYQCSEALQIFNSLPRTHRESPMIMTQIGRAYYEQAAYGEAE 553
                 55666777888888888888888888888888888888877775 PP

  == domain 4  score: 4.7 bits;  conditional E-value: 0.029
       TPR_9   8 eedweralavverllllaPddpee 31 
                 ++d+e+al++  r  +l+P+ ++ 
  KHJ32446.1 614 ARDHEQALKCFKRATQLNPKFAYA 637
                 689**************8876654 PP

  == domain 5  score: 8.1 bits;  conditional E-value: 0.0025
       TPR_9   5 aireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapda 62 
                 +  +e++++al  +   ++ + ++   ++  G+++++lG + +A   + a+ a++p +
  KHJ32446.1 645 HVANEEYDKALVSYRFGMAADKRHYNAWYGVGRVYEKLGKYDKAFVHFSAATAINPTN 702
                 56788888888888888999999*********************99999999999865 PP

  == domain 6  score: 7.7 bits;  conditional E-value: 0.0035
       TPR_9   5 aireedweralavverllllaPddpeerrdRGlllaqlGclsaAladL 52 
                 +  +++  +al++  r   laP+++  r+  ++ l+    +++A a+L
  KHJ32446.1 713 LEKQKKPRQALQYFTRATELAPRSALTRFKKARTLMSIAEYEKAQAEL 760
                 567888999**********************************99988 PP

>> DSPn  Dual specificity protein phosphatase, N-terminal half
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   6.8e-05     0.076      61     110 ..     684     730 ..     668     754 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 6.8e-05
        DSPn  61 skelskkkivhytsadekkranaafLigaYavivlklspeealkplasqe 110
                 +    +k+ vh++ a   + +na++++++ +v+ ++++p++al+ +++++
  KHJ32446.1 684 K---YDKAFVHFSAATAINPTNAVLICCIGTVLEKQKKPRQALQYFTRAT 730
                 3...4699*************************************99854 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       6.4   7.2e+03      17      30 ..     142     155 ..     133     156 .. 0.76
   2 ?   -2.5   0.0       4.6   5.2e+03       7      31 ..     470     495 ..     467     499 .. 0.75
   3 ?   -2.5   0.1       4.9   5.5e+03       9      24 ..     504     519 ..     503     521 .. 0.68
   4 ?    8.3   0.3    0.0019       2.1       3      27 ..     534     558 ..     534     563 .. 0.89
   5 ?   -0.2   0.0      0.88   9.9e+02       8      28 ..     607     627 ..     606     630 .. 0.75
   6 ?    0.0   0.0      0.76   8.6e+02       9      24 ..     676     691 ..     675     698 .. 0.84
   7 ?   -0.1   0.0      0.85   9.5e+02       8      28 ..     709     729 ..     707     733 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 6.4
      TPR_10  17 rydeAealleeala 30 
                 +  +A  ++e+al 
  KHJ32446.1 142 NKSKAISYFEDALK 155
                 667899999*9996 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 4.6
      TPR_10   7 NLanalrqrgrydeAeal.leealai 31 
                  ++++    ++  eAe l +eea+ +
  KHJ32446.1 470 QIGITSNTNQKIYEAEILkQEEAVKT 495
                 56777777778889999999999986 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 4.9
      TPR_10   9 analrqrgrydeAeal 24 
                 +n ++++ ry+ +eal
  KHJ32446.1 504 GNGYYALARYQCSEAL 519
                 7888888888755555 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.0019
      TPR_10   3 sslnNLanalrqrgrydeAeallee 27 
                 ++++ +++a++++  y eAe+ +++
  KHJ32446.1 534 MIMTQIGRAYYEQAAYGEAEKVYKR 558
                 6899****************99987 PP

  == domain 5  score: -0.2 bits;  conditional E-value: 0.88
      TPR_10   8 LanalrqrgrydeAealleea 28 
                 L+n  +  +++++A++ +++a
  KHJ32446.1 607 LGNSWSLARDHEQALKCFKRA 627
                 677777778888888888777 PP

  == domain 6  score: 0.0 bits;  conditional E-value: 0.76
      TPR_10   9 analrqrgrydeAeal 24 
                 ++++ ++g+yd+A  +
  KHJ32446.1 676 GRVYEKLGKYDKAFVH 691
                 899*********9765 PP

  == domain 7  score: -0.1 bits;  conditional E-value: 0.85
      TPR_10   8 LanalrqrgrydeAealleea 28 
                 ++ +l ++++  +A++++ +a
  KHJ32446.1 709 IGTVLEKQKKPRQALQYFTRA 729
                 5889999**********9887 PP

>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.3       5.6   6.2e+03       2      14 ..      44      54 ..      43      69 .. 0.72
   2 ?    1.9   0.0      0.37   4.1e+02      20      35 ..     139     155 ..     129     157 .. 0.73
   3 ?   -1.4   0.2       3.8   4.3e+03      27      34 ..     541     548 ..     537     549 .. 0.83
   4 ?    5.7   0.0     0.022        25      20      36 ..     614     630 ..     607     632 .. 0.85
   5 ?    5.3   0.0     0.029        33      21      36 ..     716     732 ..     704     733 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 5.6
        Sel1  2 eAmyrLGmfylyl 14
                e++y L    +yl
  KHJ32446.1 44 ESAYLLS--HCYL 54
                6788888..7776 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.37
        Sel1  20 pk.DpekAiewyekAAe 35 
                  + +++kAi ++e A +
  KHJ32446.1 139 GWdNKSKAISYFEDALK 155
                 45579*******97765 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 3.8
        Sel1  27 iewyekAA 34 
                 + +ye+AA
  KHJ32446.1 541 RAYYEQAA 548
                 68*****9 PP

  == domain 4  score: 5.7 bits;  conditional E-value: 0.022
        Sel1  20 pkDpekAiewyekAAeq 36 
                  +D e+A++++++A ++
  KHJ32446.1 614 ARDHEQALKCFKRATQL 630
                 58************876 PP

  == domain 5  score: 5.3 bits;  conditional E-value: 0.029
        Sel1  21 k.DpekAiewyekAAeq 36 
                 +  p++A++++ +A e+
  KHJ32446.1 716 QkKPRQALQYFTRATEL 732
                 34699*********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (828 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       771  (0.043003); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.71u 0.31s 00:00:01.02 Elapsed: 00:00:00.50
# Mc/sec: 4984.16
//
Query:       KHJ32447.1  [L=311]
Description: putative nitrate reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.8e-29  100.9   0.0    5.6e-29  100.4   0.0    1.3  1  FAD_binding_6  Oxidoreductase FAD-binding domain
    1.1e-27   96.9   0.0    1.5e-27   96.4   0.0    1.2  1  NAD_binding_1  Oxidoreductase NAD-binding domain
    6.8e-05   23.0   0.0     0.0064   16.6   0.0    2.2  2  NAD_binding_6  Ferric reductase NAD binding domain
     0.0098   16.1   0.0      0.017   15.3   0.0    1.5  1  FAD_binding_9  Siderophore-interacting FAD-binding domain


Domain annotation for each model (and alignments):
>> FAD_binding_6  Oxidoreductase FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.4   0.0   1.3e-32   5.6e-29       2      99 .]      67     169 ..      66     169 .. 0.94

  Alignments for each domain:
  == domain 1  score: 100.4 bits;  conditional E-value: 1.3e-32
                    EEEEEEEECCTTEEEEEEEESTTTS-----TT-EEEEEEC.....ETTCCEEEEEE.BSSTTECCEEEEEEE--TT-HHHHHHHCS-TT-EEEEEE CS
  FAD_binding_6   2 lkltekeevsedtrifrfklpsekqklglpvGqhvflrlk.....ikgeaviRsYtpissenekGelellvkvypgGkmsqaLdelkigdtleikG 92 
                    + l++k+ +s++++i+rf lp++ ++lglp+Gqh+ + ++      +++++iRsYtp+s ++e G+++ll+k yp+G++s+   ++kig+t++++G
     KHJ32447.1  67 FALSKKTIISHNVAIYRFLLPTPRSVLGLPIGQHISIAADikqadGNTKEIIRSYTPVSGDHELGYFDLLIKEYPEGNISKFVASMKIGQTIKVRG 162
                    5799********************************99885554456789********************************************** PP

                    EE-SEEC CS
  FAD_binding_6  93 PlGkfeY 99 
                    P+G f+Y
     KHJ32447.1 163 PKGAFTY 169
                    *****98 PP

>> NAD_binding_1  Oxidoreductase NAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.4   0.0   3.3e-31   1.5e-27       1     108 [.     179     287 ..     179     288 .. 0.95

  Alignments for each domain:
  == domain 1  score: 96.4 bits;  conditional E-value: 3.3e-31
                    EEEEGGGGHHHHHHHHHHHHHCT..TCSEEEEEEEESSGCGSTTHHHHHHHHHHCTTEEEEEEEESSCTTTSSSEESSHHHHHHHHHHHHSSTTEE CS
  NAD_binding_1   1 miagGtGiaPvrsvlraileeak..dktkvvlvyGnrteedllyreeleelakklpgrlkvvavvsreeagweggkgrvqdalleellslkkeeth 94 
                    miagGtGi+P++++ rai++     dkt+v+l+++n +++d+l++e+l++la   +g +kv++v+++++ +wegg g+v++++++e+l+    ++ 
     KHJ32447.1 179 MIAGGTGITPMLQISRAIIKGRAtgDKTQVNLIFANVNSDDILLKEDLDQLAMDDEG-FKVYYVLNNPPVNWEGGVGFVTTEMIKEHLPAAAFDVK 273
                    9*******************93347**************************999999.*******************************99999** PP

                    EEEECSHHHHHHHH CS
  NAD_binding_1  95 vyvCGppgMikavr 108
                    +++CGpp+M+ a++
     KHJ32447.1 274 LLLCGPPPMVSAMK 287
                    **********9986 PP

>> NAD_binding_6  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.4e-06    0.0064       6      50 ..     179     221 ..     175     240 .. 0.84
   2 !    4.2   0.0    0.0094        42     136     155 ..     271     290 ..     258     291 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.4e-06
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6   6 lvagGiGitpfisilkdllkkskkealktkkikliwvvresssle 50 
                    ++agG+Gitp++ i + ++k  +  + ++++++li+++ +s+++ 
     KHJ32447.1 179 MIAGGTGITPMLQISRAIIKGRA--TGDKTQVNLIFANVNSDDIL 221
                    9********************99..999999*****999999874 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0094
                    xxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6 136 svgvfvCGppklvkevkklv 155
                     v ++ CGpp +v  +kk++
     KHJ32447.1 271 DVKLLLCGPPPMVSAMKKIT 290
                    58899**********99986 PP

>> FAD_binding_9  Siderophore-interacting FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   3.9e-06     0.017      56     120 ..     103     166 ..      53     167 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.9e-06
  FAD_binding_9  56 glqeweelpederpvmRtYtvraldaeaeeldidfvlHgdegpaarwAaqAqpGdelaivgPgga 120
                     +++ ++ +++++ ++R+Yt+ + d+e + +d+ +    + g  +++ a+ + G+++++ gP+ga
     KHJ32447.1 103 IAADIKQADGNTKEIIRSYTPVSGDHELGYFDLLIKEYPE-GNISKFVASMKIGQTIKVRGPKGA 166
                    445667889999*****************99997777777.*********************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2246.66
//
Query:       KHJ32448.1  [L=194]
Description: putative 50s ribosomal protein l17 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.6e-33  113.7   0.0    8.6e-33  113.1   0.0    1.3  1  Ribosomal_L17    Ribosomal protein L17
  ------ inclusion threshold ------
       0.12   12.4   0.0       0.21   11.6   0.0    1.4  1  Molybdopterin_N  Molybdopterin oxidoreductase N-terminal doma


Domain annotation for each model (and alignments):
>> Ribosomal_L17  Ribosomal protein L17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.1   0.0   9.6e-37   8.6e-33       1      94 []      21     118 ..      21     118 .. 0.96

  Alignments for each domain:
  == domain 1  score: 113.1 bits;  conditional E-value: 9.6e-37
                    HHHHHHHHHHHHSEEEEEHHHHHHHHHHHHHHHHHHHH-SHHHHHHHHHHS-....HHHHHHHTHHHHTSS--S--EEEEEEEE-TTTH-EEEEEE CS
  Ribosomal_L17   1 LlrnlvtsLleherIetTlakAkelrklaeklitlakkgelaarrkalayla....lvkkLfeelapryadrngGYtRilklgprrgDaaemaile 92 
                    LlrnlvtsL++he+I tT++kAke+++laeklitl+k+++ a++rka +++     l++kLf  + +rya+r+gGYtR+l+++p + D+a+ aile
     KHJ32448.1  21 LLRNLVTSLFTHESISTTWPKAKEAQRLAEKLITLGKRNTEASKRKASSIFFtpheLIPKLFGPIRERYANRPGGYTRVLRIEPLKEDQAPSAILE 116
                    89*********************************************9988445569*************************************** PP

                    E- CS
  Ribosomal_L17  93 lV 94 
                    lV
     KHJ32448.1 117 LV 118
                    *8 PP

>> Molybdopterin_N  Molybdopterin oxidoreductase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.3e-05      0.21      16      35 ..      98     117 ..      92     120 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.3e-05
  Molybdopterin_N  16 kivgvrPfegDpdPsplleg 35 
                      ++++++P ++D++Ps +le 
       KHJ32448.1  98 RVLRIEPLKEDQAPSAILEL 117
                      89***************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1317.08
//
Query:       KHJ32449.1  [L=748]
Description: putative digestive-organ expansion factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.6e-191  636.5   6.8   3.5e-191  636.1   6.8    1.2  1  UTP25     Utp25, U3 small nucleolar RNA-associated SSU proces


Domain annotation for each model (and alignments):
>> UTP25  Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  636.1   6.8    2e-195  3.5e-191       3     473 .]     276     747 ..     274     747 .. 0.98

  Alignments for each domain:
  == domain 1  score: 636.1 bits;  conditional E-value: 2e-195
       UTP25   3 lqkellsilfsYkDllyeekslkdeeevrklyalHalnHvlktrdrvlknneklaklkessddlelrdqgftrpkvLillptreaalevvelllkllea 101
                 ++k+l+s lf+Y+D+l+ +++  ++e++r+l++lH lnH+lktr +v+knn+++a+++  s+dle+rdqgftrpkvLi+lptre+++++v+++++l+e 
  KHJ32449.1 276 VEKSLASFLFNYQDILFCARTPWNSEKLRRLVCLHFLNHILKTRYKVIKNNARIAREE-ASNDLEFRDQGFTRPKVLIILPTRESCVRFVKMIVSLYEP 373
                 5899***************************************************775.9999************************************ PP

       UTP25 102 etqvenkkrFkdefseeeeesseskpkdfqalFkgNtddaFrlGlkftrkslklyskfyssdiiiaSPlglrliieeedkkkrdtdfLsSiEvlivdqa 200
                 e q+en+krF+d + ++ +++ ++k++df++lF+gN+dd Fr+Glkftrk++k++s+fy+sdii+ SPlgl ++++ +d kk d+dfLsSiE++iv+qa
  KHJ32449.1 374 E-QQENRKRFDDMYAKKFSDEFKNKADDFRELFEGNSDDIFRIGLKFTRKTVKYFSEFYNSDIILVSPLGLLTALKGKDGKKGDYDFLSSIEIVIVEQA 471
                 *.************************************************************************************************* PP

       UTP25 201 dvlemQnwehvetvlkhlnkipkeshdadfsrvrmwylddqakllRQtlvfssyetpeinslfnskleNlaGkvkvkkvvkggslekvglkvrqvFqrf 299
                 d+l mQnweh+e++++hln++p+e+h++dfsrvr+wyld++a ++RQt+ +s+++tpeinsl+ +k++N+aG+vk+++++ g +++++glk++q+F+r+
  KHJ32449.1 472 DALLMQNWEHMEYIFDHLNLQPNETHGCDFSRVRNWYLDNKAIYFRQTVTLSAFNTPEINSLLFNKSKNWAGRVKINASYPG-VIQELGLKIKQTFSRL 569
                 **********************************************************************************.**************** PP

       UTP25 300 daesivdepdarfkfftekilpqlkkssskssgiliyipsyfdfvrvrnylke....ekvsfaaiseysskkevsraRelFfkgkkkvlLyteRlhffr 394
                 da+s++++pd+rf +f + i+p+l + +++++g+li+ipsy+dfvrvrny++     +++sf++iseyss ++v+r R+ Ff+g++++l+yteR+h+fr
  KHJ32449.1 570 DATSFTTDPDNRFTYFNSVIMPALIRHTKQNKGTLIFIPSYLDFVRVRNYFSMsqatKDLSFGSISEYSSIRDVARSRSYFFSGQQSILIYTERAHHFR 668
                 ***************************************************98888899**************************************** PP

       UTP25 395 RykikgvkkvilYklPenpefyselvr.fleksvkeeeadsaevsvrvlyskydalaLerivGseraakllkskkevyef 473
                 Ry+i+gv+kvi+++lPenp fy+e+v+ fl++s +e+    +e++vrv++sk+dal+LerivGs raa++++ + e++ef
  KHJ32449.1 669 RYRIRGVRKVIMFGLPENPVFYKEIVEgFLGRSIQEGYLTPEESHVRVIFSKWDALKLERIVGSARAANMMR-EGETFEF 747
                 **************************99*******************************************9.6778887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (748 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       692  (0.0385967); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.24s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 5151.02
//
Query:       KHJ32450.1  [L=768]
Description: putative r3h domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-14   54.2   2.4    1.8e-14   54.2   2.4    2.8  3  SUZ       SUZ domain
    5.9e-09   35.8   0.1    1.5e-08   34.5   0.1    1.7  1  R3H       R3H domain


Domain annotation for each model (and alignments):
>> SUZ  SUZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.2   2.4     2e-18   1.8e-14       3      57 .]     372     430 ..     369     430 .. 0.78
   2 ?   -3.6   0.9         2   1.8e+04      25      30 ..     448     453 ..     432     479 .. 0.51
   3 ?   -4.2   0.6         2   1.8e+04      13      34 ..     549     570 ..     547     572 .. 0.70

  Alignments for each domain:
  == domain 1  score: 54.2 bits;  conditional E-value: 2e-18
         SUZ   3 pkmkIlkRpsssssssssrgssgasssesssss.......ktleEREaeYaeARaRIFgsfe 57 
                  +mkI++R ++++ s+s++ s ++s  ++   +       +++eEREa+Y++AR+RIFg++e
  KHJ32450.1 372 TTMKIMRRCGDTGPSPSKAVSESESDGKE---KglsakekLSREEREAAYNKARERIFGKEE 430
                 59*********999666666655554444...24558999*******************975 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 2
         SUZ  25 gassse 30 
                 ++s s+
  KHJ32450.1 448 SSSLSA 453
                 222222 PP

  == domain 3  score: -4.2 bits;  conditional E-value: 2
         SUZ  13 ssssssssrgssgasssessss 34 
                 + ++s++ ++ss +s  +s+ss
  KHJ32450.1 549 QRFQSPNVQNSSYGSPVQSPSS 570
                 5667788888887777777765 PP

>> R3H  R3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   0.1   1.7e-12   1.5e-08       2      46 ..     289     334 ..     288     337 .. 0.93

  Alignments for each domain:
  == domain 1  score: 34.5 bits;  conditional E-value: 1.7e-12
                 HHHHHHHHHHHHHH-S-.-EEE-----SHHHHHHHHHHHHSSEEEE CS
         R3H   2 fllrvekklaefvkdtg.rslefppmssyeRriiHelaeayglese 46 
                 fllr+e++++efv++++   + +pp++s+ R++ H la++y+l+++
  KHJ32450.1 289 FLLRLEQEVIEFVRSSKePFFDLPPCNSFCRMLTHKLADYYHLTHQ 334
                 89*************973599***********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (768 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       838  (0.0467399); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.41
# Mc/sec: 5584.42
//
Query:       KHJ32451.1  [L=759]
Description: putative pentatricopeptide repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.4e-23   80.2   0.3      8e-10   38.8   0.0    4.6  4  PPR_2     PPR repeat family
      4e-12   46.0   0.0      3e-05   24.0   0.0    3.5  3  PPR_3     Pentatricopeptide repeat domain
      3e-11   42.8   0.2       0.45   10.2   0.0    5.7  5  PPR_1     PPR repeat
    1.5e-08   34.3   2.7      0.028   14.7   0.1    5.5  5  PPR       PPR repeat
     0.0029   17.0   0.0       0.33   10.3   0.0    2.9  4  PPR_long  Pentacotripeptide-repeat region of PRORP
      0.004   17.5   0.8       0.45   10.9   0.0    3.4  3  RPM2      Mitochondrial ribonuclease P subunit (RPM2)


Domain annotation for each model (and alignments):
>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00015      0.46      19      48 ..     345     374 ..     328     376 .. 0.81
   2 !   38.8   0.0   2.7e-13     8e-10       1      46 [.     362     407 ..     362     410 .. 0.97
   3 ?    4.4   0.2     0.014        43       3      30 ..     555     583 ..     553     591 .. 0.88
   4 !   31.0   0.0     7e-11   2.1e-07       1      50 []     628     677 ..     628     677 .. 0.98

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00015
       PPR_2  19 veeAfklfneMkkrglePnsyTysilikgl 48 
                 +++ +k+f++  + g++Pn + y++++++l
  KHJ32451.1 345 PSDTLKIFKYLISSGVKPNIFLYNVVLHSL 374
                 67889**********************987 PP

  == domain 2  score: 38.8 bits;  conditional E-value: 2.7e-13
       PPR_2   1 pdvvtyNtlIsglckkgkveeAfklfneMkkrglePnsyTysilik 46 
                 p+++ yN++++ l +  + ++A+ +++ M + ++eP++ Tysil++
  KHJ32451.1 362 PNIFLYNVVLHSLIEGQEAQSAWAFYERMIQESIEPDVTTYSILLN 407
                 8*******************************************98 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.014
       PPR_2   3 vvtyNtlIsglck.kgkveeAfklfneMk 30 
                 + +yN+++ +++k + + ++A ++   M 
  KHJ32451.1 555 TYIYNVILMCFYKfEDRAKDAPDVIANML 583
                 789**********8888****99999996 PP

  == domain 4  score: 31.0 bits;  conditional E-value: 7e-11
       PPR_2   1 pdvvtyNtlIsglckkgkveeAfklfneMkkrglePnsyTysilikglck 50 
                 pdv t+ +l + +++ +  ++A k++  M++r+++P  +T ++li g+++
  KHJ32451.1 628 PDVYTWSILVKIFMRLRLTRSAEKVLGMMVRRNIQPEMVTWTSLIAGYAR 677
                 9**********************************************986 PP

>> PPR_3  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0     1e-08     3e-05       3      58 ..     352     407 ..     350     412 .. 0.92
   2 !   17.7   0.0   9.4e-07    0.0028      12      60 ..     627     675 ..     624     678 .. 0.93
   3 !   14.0   0.0   1.4e-05     0.041       2      30 ..     652     680 ..     651     695 .. 0.83

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 1e-08
       PPR_3   3 lremerkgikldvvtYthLLtayanagnkklalevlermkkkgikPtvvtyNailg 58 
                 ++ +   g+k+++  Y+  L+  +  ++ + a    erm ++ i+P v ty+++l+
  KHJ32451.1 352 FKYLISSGVKPNIFLYNVVLHSLIEGQEAQSAWAFYERMIQESIEPDVTTYSILLN 407
                 5556678***********************************************97 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 9.4e-07
       PPR_3  12 kldvvtYthLLtayanagnkklalevlermkkkgikPtvvtyNailgvi 60 
                 k+dv+t+  L + +++ +  + a++vl+ m    i+P +vt+ +++  +
  KHJ32451.1 627 KPDVYTWSILVKIFMRLRLTRSAEKVLGMMVRRNIQPEMVTWTSLIAGY 675
                 79*****************************************999765 PP

  == domain 3  score: 14.0 bits;  conditional E-value: 1.4e-05
       PPR_3   2 ilremerkgikldvvtYthLLtayanagn 30 
                 +l  m+r++i++++vt+t+L+ +ya+ ++
  KHJ32451.1 652 VLGMMVRRNIQPEMVTWTSLIAGYARMQD 680
                 66779*******************99877 PP

>> PPR_1  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.23     7e+02      17      28 ..     299     310 ..     297     313 .. 0.88
   2 !    6.3   0.1    0.0026       7.8       2      17 ..     359     374 ..     358     374 .. 0.91
   3 !    8.2   0.1   0.00066         2       3      15 ..     395     407 ..     393     407 .. 0.90
   4 !    9.7   0.0   0.00022      0.67       4      33 ..     627     656 ..     626     657 .. 0.91
   5 !   10.2   0.0   0.00015      0.45       2      19 ..     660     677 ..     659     680 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.23
                 HHHTS-HHHHHH CS
       PPR_1  17 lCkaGrvdeAfe 28 
                 l kaG++d Afe
  KHJ32451.1 299 LAKAGLLDLAFE 310
                 569*******98 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0026
                 S----HHHHHHHHHHH CS
       PPR_1   2 GlkPdvvTYNtLIdGl 17 
                 G+kP+++ YN ++++l
  KHJ32451.1 359 GVKPNIFLYNVVLHSL 374
                 9**********99986 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.00066
                 ----HHHHHHHHH CS
       PPR_1   3 lkPdvvTYNtLId 15 
                 ++Pdv TY++L++
  KHJ32451.1 395 IEPDVTTYSILLN 407
                 89*********87 PP

  == domain 4  score: 9.7 bits;  conditional E-value: 0.00022
                 ---HHHHHHHHHHHHHTS-HHHHHHHHHHH CS
       PPR_1   4 kPdvvTYNtLIdGlCkaGrvdeAfelfdeM 33 
                 kPdv+T+++L++ + +  +   A++++  M
  KHJ32451.1 627 KPDVYTWSILVKIFMRLRLTRSAEKVLGMM 656
                 8***********999999999999999988 PP

  == domain 5  score: 10.2 bits;  conditional E-value: 0.00015
                 S----HHHHHHHHHHHHH CS
       PPR_1   2 GlkPdvvTYNtLIdGlCk 19 
                 +++P  vT+++LI G+ +
  KHJ32451.1 660 NIQPEMVTWTSLIAGYAR 677
                 799*************87 PP

>> PPR  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.31   9.2e+02      10      25 ..     299     314 ..     297     320 .. 0.84
   2 ?    3.8   0.0     0.027        82       2      30 ..     366     394 ..     365     395 .. 0.91
   3 ?   -1.6   0.1       1.4   4.3e+03       2      12 ..     557     567 ..     556     570 .. 0.84
   4 !   14.7   0.1   9.3e-06     0.028       1      31 []     631     661 ..     631     661 .. 0.96
   5 !   10.1   0.0   0.00028      0.82       1      16 [.     666     681 ..     666     696 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.31
         PPR  10 ycknGkleeAlelfke 25 
                 ++k+G+l+ A+e +++
  KHJ32451.1 299 LAKAGLLDLAFEAIQR 314
                 79*********98776 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.027
         PPR   2 tynslIsgycknGkleeAlelfkeMkekG 30 
                  yn++++++    + + A  ++++M+++ 
  KHJ32451.1 366 LYNVVLHSLIEGQEAQSAWAFYERMIQES 394
                 69***********************9875 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 1.4
         PPR   2 tynslIsgyck 12 
                 +yn++++++ k
  KHJ32451.1 557 IYNVILMCFYK 567
                 7*******988 PP

  == domain 4  score: 14.7 bits;  conditional E-value: 9.3e-06
         PPR   1 vtynslIsgycknGkleeAlelfkeMkekGi 31 
                 +t+++l++ + + ++ + A++++  M++++i
  KHJ32451.1 631 YTWSILVKIFMRLRLTRSAEKVLGMMVRRNI 661
                 69**************************986 PP

  == domain 5  score: 10.1 bits;  conditional E-value: 0.00028
         PPR   1 vtynslIsgycknGkl 16 
                 vt++slI gy++  ++
  KHJ32451.1 666 VTWTSLIAGYARMQDP 681
                 8**********98665 PP

>> PPR_long  Pentacotripeptide-repeat region of PRORP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00011      0.33      30     106 ..     348     415 ..     296     433 .. 0.62
   2 ?   -2.9   0.0       1.2   3.7e+03      89     129 ..     463     504 ..     451     506 .. 0.70
   3 ?    1.6   0.0      0.05   1.5e+02      87     139 ..     627     679 ..     547     681 .. 0.69
   4 ?    2.4   0.0     0.028        84      93     154 ..     633     694 ..     624     714 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00011
                 HHHHHHHHHHSSS---HHHHHHHHHHHHHC.HCSTTTHHHHHHHHHHHHHHHHHTT----HHHHHHHHHHHHHTT-H CS
    PPR_long  30 AlelydkavaegvrlaqyhynvllylcskaeaaseskknkalargfevfeamkakgvspnEatvtalarlaaakedg 106
                  l++++  +++gv+ +   ynv+l+ + ++++         +++++  +e+m ++ ++p  +t++ l   a  ++d+
  KHJ32451.1 348 TLKIFKYLISSGVKPNIFLYNVVLHSLIEGQE---------AQSAWAFYERMIQESIEPDVTTYSILLNDAKRRADT 415
                 35555555555555555555555555544421.........234455555555555555555555555444444444 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.2
                 -HHHHHHHHHHHHHTT-HHHHHHHHHHHH.HH-S---HHHHH CS
    PPR_long  89 nEatvtalarlaaakedgdlafelvkeme.kagvsPrLRsya 129
                 + a++  + +l +     d+ f+l+  ++ ++++s  L s  
  KHJ32451.1 463 SQAVFDQMLQLYVEYFKLDKLFKLIPGLShAYKLSSNLDSSR 504
                 567777888888888888888888888864667777776655 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.05
                 ---HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHHTT CS
    PPR_long  87 spnEatvtalarlaaakedgdlafelvkemekagvsPrLRsyaPaLaayckag 139
                 +p   t + l+++    + +  a+++   m + +++P + ++  ++a y +++
  KHJ32451.1 627 KPDVYTWSILVKIFMRLRLTRSAEKVLGMMVRRNIQPEMVTWTSLIAGYARMQ 679
                 44444555666666666666677777777777777777777777777777766 PP

  == domain 4  score: 2.4 bits;  conditional E-value: 0.028
                 HHHHHHHHHHTT-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHHTT-HHHHHHHHHHHHHC CS
    PPR_long  93 vtalarlaaakedgdlafelvkemekagvsPrLRsyaPaLaayckagdadkaleveehlkas 154
                  + l+++    + +  a+++   m + +++P + ++  ++a y +++d   ++++ ++++ +
  KHJ32451.1 633 WSILVKIFMRLRLTRSAEKVLGMMVRRNIQPEMVTWTSLIAGYARMQDPIMTANAVNRFEEA 694
                 55666666667777788888888889999999999999999998888765555555555555 PP

>> RPM2  Mitochondrial ribonuclease P subunit (RPM2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00015      0.45      86     116 ..     347     377 ..     327     380 .. 0.85
   2 ?    3.0   0.0     0.042   1.3e+02      90     112 ..     386     408 ..     381     414 .. 0.85
   3 ?   -3.8   0.4       5.5   1.6e+04      11      42 ..     583     614 ..     579     616 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00015
        RPM2  86 eLLtvyqDiisnklkPnkeiyeivlesLlkg 116
                 + L++++ +is  +kPn  +y++vl+sL++g
  KHJ32451.1 347 DTLKIFKYLISSGVKPNIFLYNVVLHSLIEG 377
                 5799999*********************987 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.042
        RPM2  90 vyqDiisnklkPnkeiyeivles 112
                  y  +i++++ P+  +y+i l++
  KHJ32451.1 386 FYERMIQESIEPDVTTYSILLND 408
                 689999999********999986 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 5.5
        RPM2  11 weeDkeedlnestfLetqikeiekiyekkeyn 42 
                 +  Dke+ + +++  +t+i + ++   k++ n
  KHJ32451.1 583 LSYDKENNIKDKSSETTSIASADHKTPKNNSN 614
                 67799999999998889998888777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (759 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 5393.46
//
Query:       KHJ32452.1  [L=323]
Description: hypothetical protein EV44_g1600 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-19   70.2   3.4    2.3e-19   69.1   3.4    1.6  1  zf-CCHC_3       Zinc knuckle
  ------ inclusion threshold ------
        3.2    8.0   6.0       0.26   11.4   1.3    1.7  2  zf-CCHC         Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.1   3.4   2.6e-23   2.3e-19       2      41 .]      58      98 ..      57      98 .. 0.95

  Alignments for each domain:
  == domain 1  score: 69.1 bits;  conditional E-value: 2.6e-23
   zf-CCHC_3  2 nasaaCQkClkkGHwtYECkn.agerkytkRpsrtqqLrnp 41
                + s++CQkClkkGH++YECk+ ++er+y++RpsrtqqL np
  KHJ32452.1 58 TSSTLCQKCLKKGHYSYECKAaTQERPYVSRPSRTQQLLNP 98
                6799**********************************986 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.2       1.1     1e+04       5       8 ..      33      36 ..      33      37 .. 0.80
   2 ?   11.4   1.3   2.9e-05      0.26       3      17 ..      63      77 ..      62      78 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.1
                SSSS CS
     zf-CCHC  5 nCGe 8 
                +CGe
  KHJ32452.1 33 TCGE 36
                6**8 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 2.9e-05
                TSSSSSSSSTTTTST CS
     zf-CCHC  3 CynCGepGHiardCp 17
                C +C + GH++ +C+
  KHJ32452.1 63 CQKCLKKGHYSYECK 77
                **************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1757  (0.0979977); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 2379.98
//
Query:       KHJ32453.1  [L=358]
Description: putative eukaryotic translation initiation factor 3 subunit f protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.5e-17   62.0   0.2    1.4e-16   60.9   0.2    1.6  1  MitMem_reg  Maintenance of mitochondrial structure and functi
    5.8e-16   58.5   0.0    9.8e-16   57.8   0.0    1.3  1  JAB         JAB1/Mov34/MPN/PAD-1 ubiquitin protease
  ------ inclusion threshold ------
       0.21   11.8   0.8        6.9    7.0   0.0    2.6  2  Nse4_C      Nse4 C-terminal


Domain annotation for each model (and alignments):
>> MitMem_reg  Maintenance of mitochondrial structure and function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.9   0.2   2.3e-20   1.4e-16       1     110 [.     193     303 ..     193     305 .. 0.96

  Alignments for each domain:
  == domain 1  score: 60.9 bits;  conditional E-value: 2.3e-20
  MitMem_reg   1 Eaeeigvehllkpsiqdas.stlstglnrqyyslkilqerldlikdYlkkveegelpvnheilrnlqkllnllPhleteelekefnvetnDvllvvyLa 98 
                 Eae+ g+e + k + +++   +++t+++  ++++    + ld++++Y+ +v+++e ++++++++ l++ l+  P+++ +++e++fn++++D l+v++L+
  KHJ32453.1 193 EAEKSGLELISKAKDSENRsAPVITDIEGLETAVDYTLDLLDRVSEYVSNVIDEEREPSNALGQFLKNALSMAPKVDPQDVERDFNNHIQDILVVSFLT 291
                 9**********9888766679****************************************************************************** PP

  MitMem_reg  99 sltrsilalnel 110
                 + +r++++l++ 
  KHJ32453.1 292 NTIRTQVELSQR 303
                 ********9986 PP

>> JAB  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.8   0.0   1.6e-19   9.8e-16       4     102 ..      29     124 ..      26     138 .. 0.86

  Alignments for each domain:
  == domain 1  score: 57.8 bits;  conditional E-value: 1.6e-19
                 CEEEEEHHHHHHHHHHHHHHHHHT...S--EEEEEEEESSSE.EEEEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHCTTSEEEEEEEESSSS- CS
         JAB   4 qavhleslvllkildhalrtekee...eevmGlliGelnddt.tveitnvfalpfeetekdvdavsldqeylekksellkklrgrervvGWYhshpdit 98 
                  +v + ++++++ildha r+  +     +v+G l+G  ++d   +e++n+fa+p+ e+e++   v++d ey +++ +l  k ++re ++GWY++  ++ 
  KHJ32453.1  29 LNVVVFPQAIFSILDHAIRRDIRDtqsTRVIGALLGVRSEDGlEIEVRNCFAIPHTENEDQ---VEVDIEYQKNMLSLQLKANPREVLLGWYTTSLEL- 123
                 689999***********9986554555**************99******************...566666669*********************9887. PP

                 SS-- CS
         JAB  99 vwls 102
                    +
  KHJ32453.1 124 ---N 124
                 ...4 PP

>> Nse4_C  Nse4 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.2     0.034   2.1e+02      10      25 ..     122     137 ..     116     138 .. 0.84
   2 ?    7.0   0.0    0.0012       6.9      12      40 ..     275     303 ..     273     334 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.034
      Nse4_C  10 npksFaqtVeNlFylS 25 
                 + +sF+  ++N+F+ S
  KHJ32453.1 122 ELNSFSALIQNFFASS 137
                 669**********876 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0012
      Nse4_C  12 ksFaqtVeNlFylSfLvkdgkvkielded 40 
                 ++F + ++ +  +SfL +  + ++el ++
  KHJ32453.1 275 RDFNNHIQDILVVSFLTNTIRTQVELSQR 303
                 79****************99999999874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2761.74
//
Query:       KHJ32454.1  [L=262]
Description: putative n2n2-dimethylguanosine trna methyl transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-45  154.8   0.0    2.4e-45  154.4   0.0    1.1  1  Methyltransf_16  Lysine methyltransferase
     0.0029   17.2   0.0     0.0043   16.6   0.0    1.2  1  MTS              Methyltransferase small domain
  ------ inclusion threshold ------
      0.012   15.5   0.0      0.016   15.0   0.0    1.2  1  Methyltransf_23  Methyltransferase domain
       0.03   14.0   0.0      0.041   13.5   0.0    1.2  1  Cons_hypoth95    Conserved hypothetical protein 95


Domain annotation for each model (and alignments):
>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.4   0.0   5.4e-49   2.4e-45       6     172 ..      64     225 ..      60     227 .. 0.94

  Alignments for each domain:
  == domain 1  score: 154.4 bits;  conditional E-value: 5.4e-49
  Methyltransf_16   6 eLkieedtgesigrkvWdaavvlvkylekklakelganelsklsvlELGsGtGlvGlavaell.peakviltDleellellkknielnknalks 98 
                       ++++ed + ++g+++W+a++vl+k++++      ++n+l++ ++lELG+G GlvGl+va     +  +++tD+e++++l++kni++n+  l+s
       KHJ32454.1  64 PIQLHEDLKSGCGGQLWPAGMVLAKHMLR-----YHKNSLTEARILELGAGVGLVGLSVAMGCqINKPIYITDQENMMDLMRKNIKING--LES 150
                      5899*********************9999.....4899************************768999*******************66..*** PP

  Methyltransf_16  99 kvkvevLdWgeeleedllekeevDlilaaDcvYledslelLvkvLkellkkesk..vlvaykkrreaekkFfklle 172
                      +++  vL+Wg++l++++l++++ +lilaaDcvY+e s++lL+++Lk+l++ +s+  +++++kkrr+a+ +F+k+ +
       KHJ32454.1 151 MAQELVLEWGNPLPDEVLKRQP-NLILAADCVYFEPSFPLLLTTLKDLSNLSSDtiIYFCFKKRRKADIRFLKAAR 225
                      *****************98886.**************************99998889***************9865 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   9.7e-07    0.0043      26      81 ..      89     149 ..      76     175 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 9.7e-07
                 HCHCC.....TCSEEEEET-TTSHHHHHHHHHTTC.E.EEEEESBHHHHHHHHHHHHHTTGC CS
         MTS  26 tlpke.....lsgkvlDlGcGaGvlgaalakespeae.vtlvdvdarAlesakenleankle 81 
                 ++        ++ ++l lG+G+G++g+++a  ++ ++ + ++d++ + +++ ++n++ n+le
  KHJ32454.1  89 HMLRYhknslTEARILELGAGVGLVGLSVAMGCQINKpIYITDQENM-MDLMRKNIKINGLE 149
                 44333233467788*****************9999988999998766.89*******99997 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   3.7e-06     0.016      13     131 ..      90     221 ..      80     246 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 3.7e-06
  Methyltransf_23  13 lerllpklraggrvLdiGcGtG.illevlrengf..svtgvDlspeaveiaekakkaqkdqfdeqeaae.........pqgkfdlIvlrevleh 94 
                       +r  ++  + +r+L++G+G+G   l+v+  ++    ++  D+  ++  +++++k +  +++ ++   e          +++++lI + ++ + 
       KHJ32454.1  90 MLRYHKNSLTEARILELGAGVGlVGLSVAMGCQInkPIYITDQENMMDLMRKNIKINGLESMAQELVLEwgnplpdevLKRQPNLILAADCVYF 183
                      555666678899**********666888888876669******99999998888888888886663333444554445888************* PP

  Methyltransf_23  95 vpdppellrqiatllk..pgGylllseplaslkedrlll 131
                       p++p ll+++++l +   ++ ++++   ++ k+d ++l
       KHJ32454.1 184 EPSFPLLLTTLKDLSNlsSDTIIYFCFKKRR-KADIRFL 221
                      ************9655438999999877665.5555555 PP

>> Cons_hypoth95  Conserved hypothetical protein 95
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   9.2e-06     0.041      36     150 ..      94     208 ..      69     226 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 9.2e-06
                    HCCCHCC-EEEETT-TTSHHHHH.HHHTT-SEEEEEES-HHHHHHHHHHHCCCT--TTTEEEEES-HHHHCTS--SS-E.....EEEEEE--SSST CS
  Cons_hypoth95  36 laaeiegarvLDlfaGsGalglE.AlSRgakkavlvekdkeavkilkenleelkleeetaelkedaleallklakkkee.....fdivflDPPyak 125
                     ++ +++ar+L+l aG G +gl  A+  +++k + +  +++++ ++++n++  +le+ ++el+ +  + l+ ++ k ++      d v+++P +  
     KHJ32454.1  94 HKNSLTEARILELGAGVGLVGLSvAMGCQINKPIYITDQENMMDLMRKNIKINGLESMAQELVLEWGNPLPDEVLKRQPnlilaADCVYFEPSFPL 189
                    456699***************9768999*****************************999999888887777776665411111566666665544 PP

                    TCH.HHHHHHHHHTT-EEEEEEEEE CS
  Cons_hypoth95 126 ellieevlelleekkllkenalvvv 150
                          +l++l++ + l+ ++++++
     KHJ32454.1 190 ------LLTTLKDLSNLSSDTIIYF 208
                    ......4455555556777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2059.86
//
Query:       KHJ32455.1  [L=203]
Description: putative coiled-coil domain-containing [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-39  135.5   9.4    2.6e-39  135.0   9.4    1.2  1  cwf18     cwf18 pre-mRNA splicing factor
  ------ inclusion threshold ------
      0.082   12.7   0.1       0.11   12.2   0.1    1.1  1  DUF2572   Protein of unknown function (DUF2572)


Domain annotation for each model (and alignments):
>> cwf18  cwf18 pre-mRNA splicing factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.0   9.4   2.9e-43   2.6e-39       2     135 .]       8     148 ..       7     148 .. 0.86

  Alignments for each domain:
  == domain 1  score: 135.0 bits;  conditional E-value: 2.9e-43
       cwf18   2 LeeaaeeRKeRLaalrskkrkqeekeke...eeeeeeeeeekkelpklsfRnYdpeteglklgfeappkla.ketveeqaaeleeeakeeaee...ske 93 
                 L +aa+eRK+RLa+l+s+krk +++e+        ++ e+ + ++++ls+RnYd+e++g+klgfe++p+l+ k+t+e+qa e+e+e++++++e   +k+
  KHJ32455.1   8 LGAAADERKARLAKLKSLKRKVSDDEQLesePILPNSAEKIDVAKKHLSGRNYDAESKGPKLGFENRPDLTaKTTLEQQALEIEHEIRKHNQEeqeDKG 106
                 889*******************7633221012223334444445556***********************99***************9977777889** PP

       cwf18  94 idlfnlapkkpnwDLKRdlakklekLerrTqkAiaeLireRL 135
                 +dlf+l+pk+pnwDLKR+l+  le L++rT++Aia+L++eR+
  KHJ32455.1 107 VDLFKLQPKRPNWDLKRNLNTLLETLNVRTENAIARLVHERI 148
                 *****************************************7 PP

>> DUF2572  Protein of unknown function (DUF2572)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   1.2e-05      0.11      57     159 ..      24     128 ..       5     135 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.2e-05
     DUF2572  57 klCeelplnenekvekvsleeesssdgishfiwCerkslfkkkPkkalne.gklsefineeklel.freklssppkeearekkpklywldekqteltld 153
                 +l ++++++e+ ++e++  +++ ++d  ++++  + +    k Pk ++++   l    + e+ +l +++++ + ++ee+++k + l++l+ k+ ++ l+
  KHJ32455.1  24 SLKRKVSDDEQLESEPILPNSAEKIDVAKKHLSGRNYDAESKGPKLGFENrPDLTAKTTLEQQALeIEHEIRKHNQEEQEDKGVDLFKLQPKRPNWDLK 122
                 4556789999999999*9999************************99975245665555555554489******************************* PP

     DUF2572 154 gdinav 159
                 +++n++
  KHJ32455.1 123 RNLNTL 128
                 **9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1009  (0.0562775); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.36
# Mc/sec: 1685.37
//
Query:       KHJ32456.1  [L=231]
Description: putative phosphoglycerate mutase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-34  119.8   0.0    1.5e-34  119.4   0.0    1.1  1  His_Phos_1       Histidine phosphatase superfamily (branch 1)
  ------ inclusion threshold ------
      0.095   13.0   0.0       0.17   12.1   0.0    1.3  1  TOPRIM_C         C-terminal associated domain of TOPRIM
       0.15   11.5   0.0       0.21   11.0   0.0    1.2  1  Glyco_tran_WbsX  Glycosyltransferase WbsX


Domain annotation for each model (and alignments):
>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.4   0.0   2.5e-38   1.5e-34       1     185 [.      11     213 ..      11     218 .. 0.84

  Alignments for each domain:
  == domain 1  score: 119.4 bits;  conditional E-value: 2.5e-38
                 EEEEE---BTTB--....TT----B-HHHHHHHHHHHHHHTT....S---EE...EE-SSHHHHHHHHHHHHCTT..--EEE-GGGS----GGGTT-B. CS
  His_Phos_1   1 lyLvRHGetewnaegrlqgrtdvpLteeGreqAealaerlag....epidai...ysSplkRarqTaeliaealg..lpveldegLrEidfGdwegltt 90 
                 ++L+RHGetew++ g+  grtd++Lt++G++q+ + ++ l g    ++++++   ++Sp  Ra+qT +l+   ++     e+ e++rE+++G++egl t
  KHJ32456.1  11 VFLIRHGETEWSQLGKHTGRTDIELTANGKAQVIRSGKILIGsgkiIDPQRVvkiFVSPRIRAQQTYQLLFPSTDhtYVKETSENIREWEYGRYEGLLT 109
                 68*************************************8777666444444566******************9976666899**************** PP

                 HHHHHH..HSHHHHHHHHH-GGG-B...S-BHHHHHHHHHHHHH........HHHHHTTTSE....EEEEE-HHHHHHHHHHHHT--GGGGGGB---TT CS
  His_Phos_1  91 aeiaeeypeeleawlrdpadvrppg...gEsledvaaRvaaale........elaarheget....vlvVsHggvirallarllglpleelrrleldna 174
                 +ei+++++++  + ++++ + +  g   gEs+ +v++R+++++         ++ +     +    v+v++Hg+++ra+++r++g++l++  r+ l++ 
  KHJ32456.1 110 SEIKSQRKDRGLDINSSW-NIWVDGcedGESPTEVTDRLDKFIIqikeiqklQMHE-----EnsadVVVIAHGHILRAFAKRWVGFELSMNLRMILEPG 202
                 *****9777666655444.467777789**************99444443222222.....12356********************************* PP

                 -EEEEEE-SS- CS
  His_Phos_1 175 slsvlefdegg 185
                 ++ vl++d+++
  KHJ32456.1 203 AIGVLSYDHNN 213
                 ********986 PP

>> TOPRIM_C  C-terminal associated domain of TOPRIM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.9e-05      0.17       1      53 [.      66     115 ..      66     122 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.9e-05
    TOPRIM_C   1 FitPivkvtkkkkeeisffslpeyeewkestenlkkwkikYYkGLgtstskea 53 
                 F+ P +++++   + + +f  ++++  ke++en ++w++  Y GL ts+ k  
  KHJ32456.1  66 FVSPRIRAQQ---TYQLLFPSTDHTYVKETSENIREWEYGRYEGLLTSEIKSQ 115
                 8999999994...46899999**99999999****************997765 PP

>> Glyco_tran_WbsX  Glycosyltransferase WbsX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   3.6e-05      0.21     239     332 ..      45     134 ..      12     136 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3.6e-05
  Glyco_tran_WbsX 239 kksklkkl......kkkvldYkklvkkllkkekkkkklypgvfpewDntpRrgkkglilknatpekfkkllekalekakkkkeeeklvfinaWN 326
                      +             ++k++d +++vk +++ + +++++y+ +fp+ D+t  ++++ +i ++ +  +++ ll++ +++++k+   + l + ++WN
       KHJ32456.1  45 R------SgkiligSGKIIDPQRVVKIFVSPRIRAQQTYQLLFPSTDHTYVKETSENI-REWEYGRYEGLLTSEIKSQRKD---RGLDINSSWN 128
                      2......12333447899999*****999999999**************988776665.7788999***999999876666...56667779** PP

  Glyco_tran_WbsX 327 EWaEga 332
                       W +g+
       KHJ32456.1 129 IWVDGC 134
                      **9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.35
# Mc/sec: 1950.46
//
Query:       KHJ32457.1  [L=451]
Description: putative tkp3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-11   44.8   0.0      2e-11   44.1   0.0    1.3  1  rve             Integrase core domain
      3e-08   33.6   0.0    6.3e-08   32.6   0.0    1.5  1  Integrase_H2C2  Integrase zinc binding domain
     0.0022   17.8   0.0      0.005   16.6   0.0    1.6  1  rve_3           Integrase core domain
  ------ inclusion threshold ------
      0.024   14.7   0.1      0.063   13.4   0.1    1.7  1  MLVIN_C         Murine leukemia virus (MLV) integrase (IN) C-


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.0   4.5e-15     2e-11       4     116 ..     150     253 ..     147     255 .. 0.95

  Alignments for each domain:
  == domain 1  score: 44.1 bits;  conditional E-value: 4.5e-15
         rve   4 pgelwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrp 102
                 p  +w +D+t v        + +l ++  +++++    +++  d s+++ ll   +  fg   p+ ++sDn+ +++  + ++f a+++ + ++t p rp
  KHJ32457.1 150 PLTRWGIDHTQVG------PKIILNAIEYATNWLESRLVPSA-DFSNTVPLLIYIINVFGT--PKQIISDNAGCFAGIEAQNFQAKYKLNFTHTTPVRP 239
                 788999****666......389********************.******************..************************************ PP

         rve 103 qdnGkvErfhrtlk 116
                 ++nGkvE++++ lk
  KHJ32457.1 240 RSNGKVEQANGVLK 253
                 ***********998 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.0   1.4e-11   6.3e-08       9      58 .]      86     135 ..      84     135 .. 0.96

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 1.4e-11
  Integrase_H2C2   9 ilkeaHdsagHlGiektlerlrrryyWpgmrkdvkkyvksCetCqrrkps 58 
                      ++ +H + gH +i  t++ +++ y+ p ++    +++++C++Cq  kp+
      KHJ32457.1  86 AIRLIHINQGHSSIGNTIREASQIYWHPELTLASYEVIRTCPSCQLMKPP 135
                     5899*******************************************985 PP

>> rve_3  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.1e-06     0.005       4      56 ..     230     282 ..     227     283 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.1e-06
       rve_3   4 elsyiapgkPqqNglvEsfngtlrdellneelfrslaearekleawredYNte 56 
                 +  ++ p +P  Ng+vE  ng l+  l    l  +l+ ++++l+ +++ YN++
  KHJ32457.1 230 NFTHTTPVRPRSNGKVEQANGVLKSILARTILENRLQPLHSLLAHAVAIYNRR 282
                 567899*********************************************75 PP

>> MLVIN_C  Murine leukemia virus (MLV) integrase (IN) C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   1.4e-05     0.063       3      31 ..     361     389 ..     359     396 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.4e-05
                 XXXTTEEEEEEE--SSSS--EEEEEEEEE CS
     MLVIN_C   3 kyrpGdwvyvrrhrqkkLePrWkgpyvvl 31 
                 +y pGdwv+  r+r++k eP ++gp+ + 
  KHJ32457.1 361 TYVPGDWVLRVRQRRHKFEPFYDGPWAIS 389
                 799******99***************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (451 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3277.91
//
Query:       KHJ32458.1  [L=219]
Description: putative cytosolic cu zn superoxide dismutase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       284  (0.0158403); expected 358.6 (0.02)
Passed bias filter:                      232  (0.0129399); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1765.63
//
Query:       KHJ32459.1  [L=321]
Description: putative solute carrier family 25 member 42 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-71  236.1   4.2    6.5e-25   86.9   0.1    3.0  3  Mito_carr        Mitochondrial carrier protein
    7.3e-05   22.1   1.8     0.0082   15.3   0.0    3.2  4  Serine_protease  Gammaproteobacterial serine protease
  ------ inclusion threshold ------
       0.13   12.1   0.0       0.37   10.6   0.0    1.8  1  GAD-like         GAD-like domain


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.0   0.1   9.6e-24   5.8e-20       4      93 ..      28     116 ..      26     119 .. 0.95
   2 !   78.8   0.2   3.7e-26   2.2e-22       3      94 ..     124     222 ..     122     225 .. 0.90
   3 !   86.9   0.1   1.1e-28   6.5e-25       4      93 ..     230     319 ..     227     321 .] 0.96

  Alignments for each domain:
  == domain 1  score: 71.0 bits;  conditional E-value: 9.6e-24
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 +v++ ++aGg+agav+ +v+ Pl+++K+  q+qk      k + + + l k++ eeG rgl rG++ n++r++p+sa++f++y+++k+++
  KHJ32459.1  28 PVFAAFCAGGVAGAVSRTVVSPLERLKILHQVQKAGIDGYKMS-VGKGLIKMWNEEGWRGLTRGNGTNCIRIIPYSAVQFGSYNFYKKFF 116
                 78999*******************************9887765.9*******************************************98 PP

  == domain 2  score: 78.8 bits;  conditional E-value: 3.7e-26
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS......HHHHHHHHHH.HHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa......ildvlkkiyk.eeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                 l+ +++l++Gg+ag++++++t+Pld+v+trl +q+ s  ++++ a      ++ ++  +y  e G+++lyrG++p++ +vap+ +l+f++ye ++ +++
  KHJ32459.1 124 LNSFRRLICGGAAGITSVFFTYPLDIVRTRLSIQSASFVSKTQVAnqklpgMWTTMVIMYNtEGGILALYRGIIPTIAGVAPYVGLNFMTYELIRSYFT 222
                 6789*******************************9987666555689999999999999735679*****************************9986 PP

  == domain 3  score: 86.9 bits;  conditional E-value: 1.1e-28
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 s +++l+aG+++gava+++t+P+dv++ r+q++  s+   ++++ild++k i+ +eG+rg+y+G++pnll+vap+ a  +++ye++++ll
  KHJ32459.1 230 SSIRKLAAGAISGAVAQTCTYPFDVLRRRFQINTMSGMGYQYKSILDAVKIIITQEGIRGMYKGIVPNLLKVAPSMATSWLSYEMTRDLL 319
                 67899**********************************************************************************998 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0         1     6e+03     174     191 ..      30      47 ..      25      56 .. 0.64
   2 !    4.6   0.1    0.0026        15     174     224 ..     127     179 ..     122     192 .. 0.74
   3 ?    0.2   0.1     0.058   3.5e+02      43      62 ..     186     203 ..     157     209 .. 0.76
   4 !   15.3   0.0   1.4e-06    0.0082     152     199 ..     210     257 ..     197     303 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 1
  Serine_protease 174 ynkllaGalsGviAtvlt 191
                       + ++aG ++G++  ++ 
       KHJ32459.1  30 FAAFCAGGVAGAVSRTVV 47 
                      556777777777765554 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0026
  Serine_protease 174 ynkllaGalsGviAtvlttifnsykDkkllask..vengrlltaspftllkql 224
                       ++l+ G  +G++  ++t+++   + +  ++s   v + ++ +++   + + +
       KHJ32459.1 127 FRRLICGGAAGITSVFFTYPLDIVRTRLSIQSAsfVSKTQVANQKLPGMWTTM 179
                      578888999************99998887776422577777777666665555 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.058
  Serine_protease  43 sgGlfralYrGflayalags 62 
                      +gG + alYrG+++ ++ag 
       KHJ32459.1 186 EGG-ILALYRGIIP-TIAGV 203
                      455.789*******.99985 PP

  == domain 4  score: 15.3 bits;  conditional E-value: 1.4e-06
  Serine_protease 152 nFaalgvvedeiakflkindelynkllaGalsGviAtvlttifnsykD 199
                      nF++  ++  + +     n   ++kl+aGa+sG++A ++t++f  ++ 
       KHJ32459.1 210 NFMTYELIRSYFTPEGEKNPSSIRKLAAGAISGAVAQTCTYPFDVLRR 257
                      44444444444444455567789********************98765 PP

>> GAD-like  GAD-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   6.2e-05      0.37      18      50 ..      58      90 ..      44      95 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 6.2e-05
    GAD-like 18 evseeilerykgklPeklleywrekGfcgygdg 50
                +v ++ ++ yk  + + l++ w+e+G+ g+  g
  KHJ32459.1 58 QVQKAGIDGYKMSVGKGLIKMWNEEGWRGLTRG 90
                678899**********************99877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       408  (0.0227564); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 2609.06
//
Query:       KHJ32460.1  [L=292]
Description: putative channel-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.2e-39  134.6   6.1    5.2e-39  134.3   6.1    1.1  1  MIP              Major intrinsic protein


Domain annotation for each model (and alignments):
>> MIP  Major intrinsic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.3   6.1   2.9e-43   5.2e-39      59     227 .]       7     202 ..       2     202 .. 0.95

  Alignments for each domain:
  == domain 1  score: 134.3 bits;  conditional E-value: 2.9e-43
                 HHHHHHHHHCHT-S-SHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHCHHH..................HHHTTTTSSSSSTTSSHHHHHH CS
         MIP  59 avlvylaagiSGaHlNPavTlallvarkisllrailYivaQllGaivaaallklltkgl..................esraglfanslkpglsagqalv 139
                 + +v  + giSGa +NPavT+ ++++rk s  + ++Y vaQ++Ga++aa+++++ +k++                  + +ag fa+++++ +s +++++
  KHJ32460.1   7 MLGV-YTSGISGANINPAVTFTNCIFRKQSWYKFPIYAVAQIAGAFCAAGVVYGNYKSAidifeggqgvrtvpglsdTATAGIFATYPQDFVSRTTEVF 104
                 4444.5789*******************************************************************9999******************* PP

                 HHHHHHHHHHHHHHHHCSTTSSSSTCHGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH...........STTTTHHHHHHHHHHHHHHHHH CS
         MIP 140 vEiiltfvLvlvvfaltddkrkvslgelaplaigllvaliilvgipltGaamNpArslgpavvlnk...........fedhwvylvGPliGailgalvY 227
                  E+i +++L+++++ l d+k+ +  g+l pla++++v+ i +  + +t +a+N Ar++gp++++               ++w+++v  ++G + g+++Y
  KHJ32460.1 105 NEFIAAAILMFCIYMLQDKKNMGA-GKLLPLALFFVVFGIGACFGWQTSFAINMARDFGPRLFTSCvgygsdvwtagDYYFWIPMVVSFLGCLFGGFLY 202
                 ***************999888888.***************************************999******7777568*****************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       659  (0.0367561); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2156.64
//
Query:       KHJ32461.1  [L=188]
Description: putative channel-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       304  (0.0169558); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1461.51
//
Query:       KHJ32462.1  [L=450]
Description: putative glycosyl hydrolase family 17 beta-glucosidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        0.1   11.2   1.6       0.14   10.8   1.6    1.1  1  CCDC14    Coiled-coil domain-containing protein 14


Domain annotation for each model (and alignments):
>> CCDC14  Coiled-coil domain-containing protein 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.6   7.8e-06      0.14     152     246 ..      93     192 ..      71     208 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 7.8e-06
      CCDC14 152 esesqaatasnyrlptstpvlspqrsanplvvqsevqtdsenqvasqsgavsvlatasvsra.....svsalpgvqpslaqadksavptfqqlslanei 245
                    + ++t+ n+  +t  p   p  s+ p v+++  ++ds+   a ++ +  + +t++++++     +   lp  ++s+++a+ +a+p++++l+++n++
  KHJ32462.1  93 TPATITVTETNFISTTPGPSTVPTDSIEPDVIHTTDKNDSDVAHATETPEPDMAHTTDTPESpvltiPGLYLPSPPSSTPKAQVPAAPNTDSLGSKNGM 191
                 45667899****************************************************994444444445555778888899999999999999988 PP

      CCDC14 246 l 246
                  
  KHJ32462.1 192 W 192
                 6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       340  (0.0189637); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 3207.21
//
Query:       KHJ32463.1  [L=597]
Description: putative lipase 4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-71  241.1   0.0    4.1e-71  240.4   0.0    1.2  1  COesterase     Carboxylesterase family
     0.0035   17.2   0.0      0.012   15.5   0.0    1.8  2  Abhydrolase_3  alpha/beta hydrolase fold
  ------ inclusion threshold ------
       0.13   12.3   0.0       0.34   11.0   0.0    1.6  1  TspO_MBR       TspO/MBR family


Domain annotation for each model (and alignments):
>> COesterase  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.4   0.0   6.8e-75   4.1e-71       3     497 ..      61     572 ..      59     585 .. 0.84

  Alignments for each domain:
  == domain 1  score: 240.4 bits;  conditional E-value: 6.8e-75
                 SEEEETTEEEEEEEEEESTCSEEEEEEEEESSB---GGGTTS--BE----SSEEECB.S---BESEECSSSSSCGHHCHHH...............BES CS
  COesterase   3 pvvetslGkvrGkrvklksekevdaFlGiPYAepPvgelRFkkPepaepwtgvrdAt.kfspaCpqnaeksekeekeleaw...............vsE 85 
                 p++++s+ ++ G + k      +d+F+GiPYA+pP++elR ++P+p ++  g++dA+ k +++Cpq+ + ++++++  +                 ++E
  KHJ32463.1  61 PIIQLSYARILGSSRK-----GIDSFRGIPYAKPPLEELRLRRPQPITENIGTVDASvKIPNSCPQQFTSTNPNNTVPQDAlqqiintgavqrllhINE 154
                 7999**********99.....9************************666666666642899******99999988765555899*************** PP

                 ---EEEEEEESSSSSTTSSEEEEEEE--STTTS-BGCGS-THHHHHHH.....TSEEEEE----HHHHH-B-SS..TTSBS-HHHHHHHHHHHHHHHHG CS
  COesterase  86 DCLyLnvytPkekkeakkklPVlVwihGggfqtgsaseydgsaLaaeg.....nvivVtinYRlGvlGFlstgd..eeapGNvGllDqvlALrWVkenI 177
                 DCL++ v +P+  ++ ++k+PV++ ++ ggf +gs   yd+s+L++ g      ++ V++nYRlG++G+l   +  e+   N+G +Dq+l L+WV++nI
  KHJ32463.1 155 DCLTVTVQKPSY-ATPDSKFPVVFSLFFGGFGFGSTAIYDASKLIQAGinagkPIVYVAVNYRLGAFGWLGGREikEAGLANLGHYDQILGLQWVQDNI 252
                 **********88.5899999*****************************99999*****************9664366778****************** PP

                 GGGTEEEEEEEEEEETHHHHHHHHHHHSGGGT.T.....SBSEEEEES--TTSTTTSBSH.HHHHHHHHHHHTTS-CSSHHHHHHHHHCS-HHHHHHCC CS
  COesterase 178 asFGGdpervtlfGesAGaasvsllllsplsr.g.....lfkraIlqSGsalspwaiqkk.arkrakklakkvgckassskelveclrsksaeelldaq 269
                 a+FGGdp++vtlfG+sAG+ s+  l++    +       lf+ aI+ SGs +    i++  +++ ++++ k++gc  s +++ ++clr  +++++l a 
  KHJ32463.1 253 AQFGGDPDKVTLFGTSAGSISAFNLIVARDGNlSyngkrLFRAAIMDSGSIVPTDPIDSPkPQNIFNNVVKAAGC--SGADDKINCLRGLDYNTFLYAS 349
                 *********************988887755443133445************9999999888**************..666677**************** PP

                 GG..SSSSSSTTC-SSS-B--SSSSSS-HHHHHHCGC..CSEEEEEEETTTTHHHHCCHSTTTSSSSHHHHHHHHHHHHHHHHHHHCC.....HHHHHH CS
  COesterase 270 ek..aleasssklvsfaPvvdgdflpekPeellkseg..kvplliGvnkdegllflaylldkeksvkkkeeklsesllkdelyleaek.....keelse 359
                 ++  +l +  s  +s +P  dg++l+++ ++l ++ +  ++p +iG  +deg+lf  +  ++ +++++ ++ l+ + ++d    + ++     +     
  KHJ32463.1 350 TSvpGLFDYPSVALSYIPRPDGELLTASTDDLAATGKmaPIPFIIGDQEDEGTLFSLV-QKNITTTEDIFDYLKLYFFNDASDSQIQGlidlyP--DDP 445
                 999977788889999***********99999999977*******************94.34445555555555555556666666555655421..223 PP

                 HHHHHHSTTTSSTCHHHHHHHHHHHHHHHHTHHHHHHHHHHHH..HTT-SEEEEEEE--STTSSSTTTGSSBTTTTHHHHTTGGGTSGCSS-HHHHHHH CS
  COesterase 360 aikeeytdeadrddaeksrkallelltdvlfkapvlrtaklha..srgspvYlYsfdyrnssskkpkwmgvvhgdeleyvfglpllekeeftkedekls 456
                 ++ + y  +  +++     k+l++ll+d +f++  + ++++    + + p+Y Y  +y        +  g+ h +++   +g     ++          
  KHJ32463.1 446 TAGSPYN-TGRKNNIYPQFKRLAALLGDFVFTMIRRVVLQDALanRPNIPIYSYIASYGY----GTPILGTFHVTDILPSYGIISGFPT---------- 529
                 4445554.5777777778889999********9888888877645666679999998876....3469*********998888888666.......... PP

                 HHHHHHHHHHHHHSSTTS...TTSS----B.TTTBEEEEESSSS CS
  COesterase 457 rkmmtywtnFaktgnPnk...eeeekWpkytkeeekylkinlkp 497
                 r + +y  nF++  +Pn+   +e  +Wp+  +e+++++++ + +
  KHJ32463.1 530 RSVQNYYLNFINDLDPNSgssSEFIHWPAW-NENKQVINFRKYE 572
                 8899**************887777899999.6777777776655 PP

>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.33     2e+03       7      39 ..     182     217 ..     179     219 .. 0.68
   2 !   15.5   0.0     2e-06     0.012      53      94 ..     242     282 ..     235     314 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.33
                    STTTS--TTTT...HHHHHHHHHHHTSEEEEEE--- CS
  Abhydrolase_3   7 GGfvlgsldth...dalcrelakelgavvvsvdYrl 39 
                    GGf +gs + +   + + + + +   +v v+v+Yrl
     KHJ32463.1 182 GGFGFGSTAIYdasKLIQAGINAGKPIVYVAVNYRL 217
                    666666666654434455667777788999*****9 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 2e-06
                    HHHHHHHHHTHHHHTETTCEEEEEEETHHHHHHHHHHHHHHH CS
  Abhydrolase_3  53 laalrwlaeqawelgadpsrivlaGdSaGGnlaaavalrard 94 
                    +  l+w++++ +++g dp++++l+G+SaG  ++a  ++ ard
     KHJ32463.1 242 ILGLQWVQDNIAQFGGDPDKVTLFGTSAGS-ISAFNLIVARD 282
                    5569******99****************85.55555555555 PP

>> TspO_MBR  TspO/MBR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   5.6e-05      0.34      25      81 ..     159     213 ..     139     224 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 5.6e-05
                 HHS---TTS--HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGCTTTT CS
    TspO_MBR  25 kslrkPpwaPpdwvfppvWtvlyilmgvaaylvwkalalyavqlvlnllwsplffgl 81 
                  +++kP++a+pd  fp+v ++ ++  g+ +  +++a    ++q ++n+   ++++ +
  KHJ32463.1 159 VTVQKPSYATPDSKFPVVFSLFFGGFGFGSTAIYDA--SKLIQAGINAGKPIVYVAV 213
                 5899******************************99..4556667776655555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (597 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4178.67
//
Query:       KHJ32464.1  [L=578]
Description: putative atp-dependent rna helicase mss116 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.9e-44  150.5   0.5    4.1e-41  140.7   0.2    2.4  2  DEAD           DEAD/DEAH box helicase
    9.4e-24   83.9   2.7    5.5e-23   81.4   0.2    3.0  4  Helicase_C     Helicase conserved C-terminal domain
    2.3e-07   31.0   0.2    8.6e-07   29.1   0.0    1.9  2  ResIII         Type III restriction enzyme, res subunit
      0.003   16.8   0.0     0.0054   16.0   0.0    1.4  1  ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
  ------ inclusion threshold ------
      0.016   15.0   0.0      0.028   14.2   0.0    1.4  1  AAA_30         AAA domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.7   0.2   1.2e-44   4.1e-41       2     175 ..     110     288 ..     109     289 .. 0.87
   2 !    7.8   0.0   0.00073       2.6      43     102 ..     343     404 ..     309     415 .. 0.72

  Alignments for each domain:
  == domain 1  score: 140.7 bits;  conditional E-value: 1.2e-44
                 HHHHHHHHHHHTTC.EEEEEESTTSSHHHHHHHHHHHHHHHS....TTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.STSEEEEEETTSSHHHHHHHH CS
                 xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilggg.dvlvaaeTGsGKTlaflipvlqivyet....kgktgpkalivePtreLaeqtlnnlkkfkky.idlrvlliiggvaardqlskl 94 
                 +iQa++i+ +l+ + ++l++a+TG+GKT afl+p++q+++++       ++   l+++PtreLa q++++++ + +   + +++++igg++++++++++
  KHJ32464.1 110 PIQAATIQDLLDHRvNCLAQAKTGTGKTIAFLLPAIQTLVTKekniIPGKHISLLVISPTRELALQIAKEAQGLSQRfPKFTTHVCIGGTNKEKEQREI 208
                 8**********8877************************98776663556689******************9999975568888889999998888888 PP

                 HTTCSEEEEEHHHHHHHH....HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHHH CS
                 xxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  95 dngvdivvgtpgrlddll....stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvkk 175
                  +++di+++tpgrl+d+l      +  +l+ + +lVlDEadrlld+gf ++i+ri++ lp++  +   +rq +++SAT++  ++k
  KHJ32464.1 209 IKKCDILIATPGRLLDHLiepnFVK--KLETLDTLVLDEADRLLDMGFMKDIERIVHYLPDKIGN---KRQGMLFSATITPRINK 288
                 899*************997542223..3*******************************877665...4679*******977666 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00073
                 TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEE.EEETTSSHHHHHHHHHTT.CSEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx RF
        DEAD  43 kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvl.liiggvaardqlskldng.vdivv 102
                 + +   ka+i +Pt++La   ++ l++f++   l+v  + +++ ++++ ++++++    ++v
  KHJ32464.1 343 RCSGVFKAIIFAPTTALADFYHKILRNFLDISYLNVIhSRTSQGKRNKTIAEFRQAtNGVLV 404
                 5667789**********************954455543444455555555555433244444 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.16   5.7e+02      20      73 ..     164     218 ..     144     219 .. 0.63
   2 ?   -2.8   0.0       2.2   7.8e+03       9      39 ..     264     297 ..     257     315 .. 0.66
   3 !   81.4   0.2   1.5e-26   5.5e-23      18     111 .]     349     444 ..     334     444 .. 0.88
   4 ?   -3.1   0.0       2.7   9.6e+03      48      62 ..     488     502 ..     469     532 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.16
                 EEEESSHH...HHHH.HHHHHHHT.TSTEEEEST.TSTHHHHHHHHHHHHTTSSSEEEES CS
  Helicase_C  20 lifvntid...rlek.vklllekk.gikvavlhg.elpqnereeileqfnkgesdvLiat 73 
                 l++++t++   ++ k ++ l +++ ++++ v+ g + + +e++ei+++      d+Liat
  KHJ32464.1 164 LVISPTRElalQIAKeAQGLSQRFpKFTTHVCIGgTNKEKEQREIIKKC-----DILIAT 218
                 6667777753322224444445557666666666145566777888776.....677777 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.2
                 HH.HHTTTTSEEEEEESSHH.HHHH.HHHHHHHT CS
  Helicase_C   9 ll.kleeeggkilifvntid.rlek.vklllekk 39 
                 +l ++  ++++ ++f+ ti+ r++k ++l+l + 
  KHJ32464.1 264 YLpDKIGNKRQGMLFSATITpRINKvADLILGQD 297
                 4445556778889999999988877656664444 PP

  == domain 3  score: 81.4 bits;  conditional E-value: 1.5e-26
                 EEEEEESSHHHHHH.HHHHHHHT.TSTE.EEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTTSSSTT CS
  Helicase_C  18 kilifvntidrlek.vklllekk.gikv.avlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqriGRtgRag 111
                 k++if++t+  ++   k+l +++ +i++  v+h++++q +r++++++f++ +  vL+atd+++rGidip v++Vi+++lp n +syi+r GRt+Rag
  KHJ32464.1 349 KAIIFAPTTALADFyHKIL-RNFlDISYlNVIHSRTSQGKRNKTIAEFRQATNGVLVATDIVARGIDIPAVTNVIQVGLPMNKESYIHRLGRTARAG 444
                 89********887744555.666755541689****************999988*****************************************97 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 2.7
                 TTSTHHHHHHHHHHH CS
  Helicase_C  48 gelpqnereeileqf 62 
                 ++++q++ ++i ++f
  KHJ32464.1 488 ATMEQEKHKKIYQSF 502
                 467888888888877 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.0   2.4e-10   8.6e-07      12     168 ..     116     281 ..     104     284 .. 0.72
   2 ?   -2.5   0.0       1.2   4.5e+03      56      90 ..     349     383 ..     336     406 .. 0.58

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 2.4e-10
                 HHHHT......TTSEEEEEESTTSTHHHHH.HHHHHHH-S...........-EEEEESSHHHHHHHHHHGGGGTGG.......GEEEESSS-B--.... CS
      ResIII  12 ienlleklkskrdkrglikmaTGtGKTlva.aklierllkkgkee......kflflvprkslleqtleefkkflseayke...igkkvsgdkkkakekd 100
                 i++ll     +++ + l ++ TGtGKT+   + +i+ l +k+k+         l++ p+++l  q  +e + +++   k+   ++   ++++k++ ++ 
  KHJ32464.1 116 IQDLL-----DHRVNCLAQAKTGTGKTIAFlLPAIQTLVTKEKNIipgkhiSLLVISPTRELALQIAKEAQGLSQRFPKFtthVCIGGTNKEKEQ-REI 208
                 33333.....455688899*********998899999999876659***999***************7776655554444333333333333333.567 PP

                 ...-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS....TTTHHHHHT---.....SEEEEEESS CS
      ResIII 101 stnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak...kswreilekfke.....avllglTAT 168
                 +++++il++t  +l  ++    e +  ++ ++ d ++ DEa rl ++   k +++i+ ++++        + ++AT
  KHJ32464.1 209 IKKCDILIATPGRLLDHL---IEPNFVKKLETLDTLVLDEADRLLDMgfmKDIERIVHYLPDkignkRQGMLFSAT 281
                 89****************...5566666777778************966667777766664433333556667777 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.2
                 -EEEEESSHHHHHHHHHHGGGGTGG......GEEEES CS
      ResIII  56 kflflvprkslleqtleefkkflseayke..igkkvs 90 
                 k+++++p+++l +   + +++fl+  y +  +  + +
  KHJ32464.1 349 KAIIFAPTTALADFYHKILRNFLDISYLNviH--SRT 383
                 78888999888776666666666666655322..222 PP

>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.5e-06    0.0054      83     154 ..     377     446 ..     349     470 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.5e-06
  ERCC3_RAD25_C  83 pyiyGetseaerlkilqkfkknpkvntiflskvgDtsiDlPeanvliqisshfgsrrqeaqrlGriLrakkk 154
                    + i+ +ts+ +r k + +f++ ++  +++   +    iD+P  + +iq+   +  +     rlGr  ra ++
     KHJ32464.1 377 NVIHSRTSQGKRNKTIAEFRQATNG-VLVATDIVARGIDIPAVTNVIQVGLPMN-KESYIHRLGRTARAGNY 446
                    568999**************98665.5556788899*************98775.566789****9999876 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   7.7e-06     0.028       5      97 ..     111     246 ..     107     268 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 7.7e-06
      AAA_30   5 eQaaavealltsgdrvavltGpAGtGKt..talkalreaweaag.......grviglAptgkaAkvLaeelgieastiakllkrlk............. 81 
                  Qaa ++ ll ++   +++++  GtGKt  ++l a++ ++++++        ++++++pt + A ++a+e++  +++  k+++                
  KHJ32464.1 111 IQAATIQDLLDHR-VNCLAQAKTGTGKTiaFLLPAIQTLVTKEKniipgkhISLLVISPTRELALQIAKEAQGLSQRFPKFTTHVCiggtnkekeqrei 208
                 6999999999887.58999*********4456899*******977****999999**************999988888888865557777788877777 PP

      AAA_30  82 .......................grarlepgtllivDEa 97 
                                          ++le+ + l+ DEa
  KHJ32464.1 209 ikkcdiliatpgrlldhliepnfV-KKLETLDTLVLDEA 246
                 777777777777777777777642.45566677777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (578 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4075.44
//
Query:       KHJ32465.1  [L=413]
Description: putative multisynthetase complex auxiliary component p43 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.9e-23   80.6   0.1    1.6e-22   79.4   0.1    1.7  1  tRNA_bind  Putative tRNA binding domain
    2.4e-06   27.5   0.0    4.5e-06   26.6   0.0    1.4  1  GST_C_2    Glutathione S-transferase, C-terminal domain
    0.00037   20.7   0.1     0.0018   18.4   0.0    2.2  2  GST_C      Glutathione S-transferase, C-terminal domain
    0.00042   20.5   0.1     0.0013   18.8   0.0    1.9  2  GST_C_3    Glutathione S-transferase, C-terminal domain
  ------ inclusion threshold ------
      0.016   15.0   0.0      0.048   13.5   0.0    1.9  2  GST_C_6    Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> tRNA_bind  Putative tRNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.4   0.1   4.5e-26   1.6e-22       1      96 []     219     334 ..     219     334 .. 0.93

  Alignments for each domain:
  == domain 1  score: 79.4 bits;  conditional E-value: 4.5e-26
                 EEEEEEEEEEEETTSSTEEEEEEEESSSS............EEEEEESCTTTSTHHHHTTEEEEEETTSESEEETTEEESSEE-EEEC........CES CS
   tRNA_bind   1 lrvGkvleaeehpnadkLlvlkvdvGeee............prqivsgaknvyepeelvakkvvvvanlkpkklrGveSeGMilsaee........lde 79 
                 lrvG++l+a +hp+ad+L+v ++ +G++              r+++sg++   + ee++++kvvvv+nlkp k+rG++S +M+l+a+           +
  KHJ32465.1 219 LRVGHILKAIKHPEADSLYVSTISMGDKPgtddtseyegqvVRTVCSGLSGLIPLEEMQGRKVVVVCNLKPVKMRGIKSAAMVLAASPrpkdgeddNHS 317
                 79************************9988889999999999************************************************998754445 PP

                 SCEEEEEESST--TTCE CS
   tRNA_bind  80 kevgilelpadveaGek 96 
                 k v+++++p+d++aGek
  KHJ32465.1 318 KLVELVSPPEDAKAGEK 334
                 558999********986 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   1.2e-09   4.5e-06      15      68 ..      39      94 ..      38      95 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 1.2e-09
                HHHCTTT---SS.CTTCS--HHHHHHHHHHHHHHHH..HHS----TT-HHHHHHHH CS
     GST_C_2 15 ldaleahLadspflfGdqptlaDialapflvrlraa..gpgfdireaypnlraWle 68
                l++l++hLa ++ l+G +p+ aD+al+  l  l      ++ + +++ypn++++++
  KHJ32465.1 39 LSTLNNHLASRTTLLGTKPSEADVALYHSLASLVSSwtVEQRTGEKGYPNIVRHFD 94
                899*************************99999555423344889*******9986 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   5.1e-07    0.0018      23      93 .]      27     100 ..       2     100 .. 0.76
   2 ?   -1.9   0.1       1.1   3.9e+03      28      37 ..     136     145 ..     119     180 .. 0.52

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 5.1e-07
                 HHHHHHHHHHHHHHHHHHHHHTSSSSSTTSSCHHHHHHHHHHH...HHHHHTTTTT...TTTSHHHHHHHHHHHTSH CS
       GST_C  23 lvdealekvaevlsaleeelkkqdylvGdkltlADialvpiln...wlqrlglafg...qekfpnlkawlerimarp 93 
                 l+ ++ e  +  ls l+++l+ ++ l G+k++ AD+al+  l       +  ++     ++++pn+ ++++ + ++p
  KHJ32465.1  27 LKSISGEDQNLLLSTLNNHLASRTTLLGTKPSEADVALYHSLAslvS--SWTVE-QrtgEKGYPNIVRHFDFVQNSP 100
                 5566667778899**************************99996432..32222.2355889******999777766 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.1
                 HHHHHHHHHH CS
       GST_C  28 lekvaevlsa 37 
                 ++++ ++ sa
  KHJ32465.1 136 KKEKTKIKSA 145
                 3333333222 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   3.8e-07    0.0013      18      91 ..      15     101 ..       1     104 [. 0.81
   2 ?   -3.2   0.1       2.8     1e+04      18      40 ..     132     158 ..     122     165 .. 0.52

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 3.8e-07
                 H.........HHHHHHHHHHHHCHHHHHHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHH....TCC...CC-HHHHHHHHHHHTSHH CS
     GST_C_3  18 a.........ekkkefleerlpkflkyfekvlkkkgggylvgdklTyADlalfqvldgleea....eal...kkfpklkalyervearpk 91 
                 +         e+ k++  e  +  l+ ++++l+    + l+g k + AD+al++ l  l +     +     k +p++ ++ + v++ pk
  KHJ32465.1  15 TeikqwlttcERLKSISGEDQNLLLSTLNNHLA--SRTTLLGTKPSEADVALYHSLASLVSSwtveQ-RtgeKGYPNIVRHFDFVQNSPK 101
                 23456777789999999999999**********..7889******************9999999862.246799*************998 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.8
                 H....HHHHHHHHHHHHCHHHHHHHHH CS
     GST_C_3  18 a....ekkkefleerlpkflkyfekvl 40 
                 +    ++k +++  +  k+ + +++ l
  KHJ32465.1 132 KerikKEKTKIKSATDGKISELVDRTL 158
                 223444445555555555555555555 PP

>> GST_C_6  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       2.1   7.5e+03      42      57 ..      12      27 ..       6      29 .. 0.76
   2 ?   13.5   0.0   1.3e-05     0.048       5      62 ..      39      94 ..      36      96 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 2.1
     GST_C_6 42 lespelrellkeypNL 57
                 es+e+++ l+ ++ L
  KHJ32465.1 12 AESTEIKQWLTTCERL 27
                5666899999999988 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 1.3e-05
     GST_C_6  5 leaLselLgdkkyFfGdkPtslDAlvFGhlaqilytplesp.elrellkeypNLvayce 62
                l++L + L++ + ++G kP+++D++++  la+++     ++ e r+  k ypN+v++ +
  KHJ32465.1 39 LSTLNNHLASRTTLLGTKPSEADVALYHSLASLVSS---WTvEQRTGEKGYPNIVRHFD 94
                7889999999999***99***************655...5534555556*******976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1342  (0.0748508); expected 358.6 (0.02)
Passed bias filter:                      666  (0.0371465); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 3035.46
//
Query:       KHJ32466.1  [L=318]
Description: hypothetical protein EV44_g2448 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-57  194.5   8.4      2e-57  194.1   8.4    1.1  1  Kei1      Inositolphosphorylceramide synthase subunit Kei1
  ------ inclusion threshold ------
        3.5    7.8  10.1       0.17   12.0   3.3    2.2  2  SPC12     Microsomal signal peptidase 12 kDa subunit (SPC12)
        8.6    6.4  11.3        3.1    7.8   6.8    2.0  2  MARVEL    Membrane-associating domain


Domain annotation for each model (and alignments):
>> Kei1  Inositolphosphorylceramide synthase subunit Kei1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.1   8.4   3.4e-61     2e-57       1     189 [.      15     215 ..      15     216 .. 0.83

  Alignments for each domain:
  == domain 1  score: 194.1 bits;  conditional E-value: 3.4e-61
        Kei1   1 sflgilsLqtGaelilllallNKvaGlYGlLalltGaplsflqlsmylySllvlvllalllphirkesplkilllavlYllDtvistaytvlFavdWfl 99 
                 +flg++sL tG+e+i++++++NK++G+YGlLa+ltG +ls lq++my+yS+l++v+la+l+phirk+sp+++lll+++Yl+Dtvi+t++t +Fa+dWfl
  KHJ32466.1  15 RFLGVMSLSTGVEMISIFMIFNKLTGFYGLLAILTGLRLSSLQITMYIYSCLAIVILAYLIPHIRKQSPFQCLLLSYFYLIDTVINTLFTCAFAIDWFL 113
                 5************************************************************************************************** PP

        Kei1 100 vleehdaaaaastagsasaeatagatapa..............avssaasatsasvsaatss..............slasavlqqEsaasiiiivllll 170
                 ++++ ++++ + +  s+ +++++++++ +              +v+                              +++ +++  E++ s++++v+l++
  KHJ32466.1 114 TITNGRSNSPTVA-ASNNMAKATTFKDHMynisdienvakptqSVT---------------LvneaivysvvsataTATPGSRFDETVPSVLLVVALTM 196
                 *999888877754.55555555556666556666555554433222...............02223333444444478889999*************** PP

        Kei1 171 vriYfalvllsyarqllkq 189
                  r+Yf+l++l+y+rq+l++
  KHJ32466.1 197 TRVYFSLIVLAYVRQVLRR 215
                 *****************97 PP

>> SPC12  Microsomal signal peptidase 12 kDa subunit (SPC12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   3.3   2.9e-05      0.17      12      55 ..      34      77 ..      30      79 .. 0.91
   2 ?   -1.4   0.6      0.44   2.6e+03      13      49 ..     160     196 ..     155     208 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.9e-05
       SPC12 12 llqvilvlsaviafivGyitqdlkltlyillagvvltllvvvPp 55
                +++ +  + +++a+++G  +++l++t+yi+ + +++ l+  +P+
  KHJ32466.1 34 IFNKLTGFYGLLAILTGLRLSSLQITMYIYSCLAIVILAYLIPH 77
                7788888999*************************999999996 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.44
       SPC12  13 lqvilvlsaviafivGyitqdlkltlyillagvvltl 49 
                 ++ ++v s+v a ++    ++++ t+  +l+ v+lt+
  KHJ32466.1 160 VNEAIVYSVVSATATATPGSRFDETVPSVLLVVALTM 196
                 5566677777777777777777777777777777776 PP

>> MARVEL  Membrane-associating domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   6.8   0.00051       3.1      11     103 ..      25     117 ..      16     139 .. 0.80
   2 ?    0.6   0.1     0.089   5.3e+02      70      95 ..     180     205 ..     152     227 .. 0.61

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00051
      MARVEL  11 ilqlvfaiiilgliasliakldqllgspssalnfavfvavfsflyalfllvlylfknsaftsilwplidlivdalaallwlvafialaaglrd 103
                 +++++   +i+    ++++ l++l g   s+l++++ +     +++l++l++ + k+s f++ l  ++ li +++++l++ + +i +   +++
  KHJ32466.1  25 GVEMISIFMIFNKLTGFYGLLAILTGLRLSSLQITMYIYSCLAIVILAYLIPHIRKQSPFQCLLLSYFYLIDTVINTLFTCAFAIDWFLTITN 117
                 566777777777777777777778888889999******9999*********9999************************9999999999888 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.089
      MARVEL  70 ftsilwplidlivdalaallwlvafi 95 
                 + +   p ++l+v + ++ +++   +
  KHJ32466.1 180 RFDETVPSVLLVVALTMTRVYFSLIV 205
                 44555555555555555555554333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       759  (0.0423336); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 2592.49
//
Query:       KHJ32467.1  [L=138]
Description: putative 60s ribosomal protein l19 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-33  115.7   7.7    1.8e-33  115.7   7.7    2.0  2  Ribosomal_L19e  Ribosomal protein L19e


Domain annotation for each model (and alignments):
>> Ribosomal_L19e  Ribosomal protein L19e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.7   7.7   9.9e-38   1.8e-33      55     143 ..       1      89 [.       1      90 [. 0.98
   2 ?   -0.7   6.0     0.077   1.4e+03      60      99 ..      88     127 ..      87     130 .. 0.79

  Alignments for each domain:
  == domain 1  score: 115.7 bits;  conditional E-value: 9.9e-38
                     ---THHHHHHHHHHHTT-S-SGGG--S-HHHHS-HHHHHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHTT--SSHHHHHHHHT-X CS
  Ribosomal_L19e  55 gnsrararerkekkrkgrrrgsGkrkGtkeaRlpekelWikriRalRrlLkelrekkkidkktYrelYrkakGgefknkavLkeyiekk 143
                     ++sr+rare+ke+++ gr+rg GkrkGt++aR+p+++ W++r+R+lRrlL ++r+++kidk+ Y++lY  +kG++fk+k++L e+i+++
      KHJ32467.1   1 MHSRSRARELKEARKLGRHRGLGKRKGTADARMPSQVIWMRRLRVLRRLLVKYRASGKIDKHLYHNLYSLSKGNTFKHKRALVEHIHRA 89 
                     59*************************************************************************************87 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.077
                     HHHHHHHHHHTT-S-SGGG--S-HHHHS-HHHHHHHHHHH CS
  Ribosomal_L19e  60 rarerkekkrkgrrrgsGkrkGtkeaRlpekelWikriRa 99 
                     ra+++k++ r  +++   kr  tk aR  ++e+ i ++R+
      KHJ32467.1  88 RAKAEKARERILKEEMDAKRAKTKAARERKQERVIAKQRQ 127
                     5666666666667777889999999**9999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1669  (0.0930894); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 992.63
//
Query:       KHJ32468.1  [L=2671]
Description: putative 50s ribosomal protein l19e [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.4e-97  325.9   0.6    3.4e-97  325.9   0.6    3.0  2  Gcn1_N         Generalcontrol nonderepressible 1 (Gcn1) N-ter
    1.2e-28   96.7  22.8       0.45   10.9   0.0   18.7 19  HEAT           HEAT repeat
    1.9e-28   98.5  25.0    1.2e-07   32.1   0.1   15.7 17  HEAT_EZ        HEAT-like repeat
    7.3e-26   90.4  21.0    3.7e-05   24.0   0.0   11.9 12  HEAT_2         HEAT repeats
    7.3e-13   48.9   1.4        2.2    8.9   0.0   10.5 12  Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
    1.8e-12   47.3   7.4    0.00056   19.5   0.1    7.3  9  CLASP_N        CLASP N terminal
    3.2e-08   33.9   3.3       0.33   11.1   0.1    5.4  5  ParcG          Parkin co-regulated protein
    3.2e-05   24.3   1.2       0.22   11.8   0.0    4.5  4  FANCI_S2       FANCI solenoid 2
    9.5e-05   22.2   0.0       0.31   10.8   0.0    5.5  5  TIP120         TATA-binding protein interacting (TIP20)
     0.0042   17.7   5.5        4.7    7.8   0.0    5.0  4  DUF937         Bacterial protein of unknown function (DUF937)
  ------ inclusion threshold ------
      0.013   15.0   6.9        2.6    7.5   0.0    5.9  6  Tti2           Tti2 family
      0.082   12.9   0.1       0.25   11.3   0.1    1.8  1  CHAD           CHAD domain
        0.4    9.8  39.8       0.13   11.4   0.9    9.8 10  MMS19_C        RNAPII transcription regulator C-terminal
        1.5    8.5  11.9      0.066   12.9   0.2    4.7  5  RIX1           rRNA processing/ribosome biogenesis


Domain annotation for each model (and alignments):
>> Gcn1_N  Generalcontrol nonderepressible 1 (Gcn1) N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  325.9   0.6  2.7e-100   3.4e-97       2     357 ..     364     716 ..     363     717 .. 0.98
   2 ?    1.1   0.9      0.15     2e+02     239     331 ..    2371    2457 ..    2364    2464 .. 0.80

  Alignments for each domain:
  == domain 1  score: 325.9 bits;  conditional E-value: 2.7e-100
      Gcn1_N   2 dhRvllaemLsalppsesvsskileglapllaKEtnEaalaaevsalakhltfllksgvevpkkvvdaivkGladkKppvRrlwalrvGevlwnleee. 99 
                 d+R+ +aemL++++ s++  s  + +la ++ KEt+E+ l  e+ +l + l   + +g +++k+v++ai++G++dkKp ++++w+l +G+  +++ee+ 
  KHJ32468.1 364 DQRAKFAEMLASISVSKDKISWTCRKLAVVADKETSETVLVPETHTLLHFLLQGVFNGEKIDKDVISAIINGISDKKPFIKKTWILFLGNFYMSMEEDv 462
                 9***********************************************************************************************998 PP

      Gcn1_N 100 llsssvaaskfaeavlpkLektlkevvanPlpaaqsglvseayvvlalllgrlsssgsskvesllkkasivkqllalepKpsfLlnpkvYsKltseedl 198
                 l s++    +++ +vlp+++ t+ +v+++P++a+qsgl+++ayv+ +++ ++l +s ++kve  + +a++ +++l++epKpsf+lnp+vY Klt++ d+
  KHJ32468.1 463 LISPKI--DNLTLSVLPQILLTFRNVITSPIAAVQSGLITSAYVFATIAHSKLIHSANTKVEHEIIQAQVKDHVLMMEPKPSFVLNPRVYGKLTNDIDF 559
                 788887..9****************************************************************************************** PP

      Gcn1_N 199 kWllRAlaavasalkeesseeaaktawaqafiylivsssvspevRrealealsklyaanpelvskviiealwswlesleeaekdsaavlaktenenLsl 297
                  W++R l ++++++ + + ++++ +aw+qa+i+li+ss+++ e+++ea++ l+kly ++p ++s++   +lw+w ++le +ekdsaa  akt+n++L +
  KHJ32468.1 560 LWFMRTLMNFSQYVITMEIDSNVTIAWSQAIIFLICSSAIKFEIQKEAISNLRKLYQQEPIRISQIFNAGLWQWHRDLELQEKDSAALIAKTKNKRLYR 658
                 *************9998889******************************************************************************* PP

      Gcn1_N 298 vlkaiclspaeklgkdvdeevlekqlvellVlarheliprssWIdlclragvDPgkLvre 357
                 ++ +ic+  +++++  ++e ++e+q++ +lVl+r+e+ip+++WIdlc+ra+vDPg+L+r 
  KHJ32468.1 659 IVYSICP--SSTEDPGINEMIRENQMITMLVLCRPEIIPNVNWIDLCIRANVDPGELARS 716
                 *******..5666689*****************************************985 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.15
      Gcn1_N  239 spevRrealealsklyaanpelvskviiealwswlesleeaekdsaavlaktenenLslvlkaiclspaeklgkdvdeevlekqlvellVlar 331 
                  +  vR + ++al +++ +   +++++ i ++ ++++s+    +d++ +la  +++ L+++ k+i+l   + + + + +++l+++l    Vla 
  KHJ32468.1 2371 DLGVRIAIMKALYEVVNKAGTKINDTSIASISNIIKSE---IEDNDLSLAIINAKLLAAFSKVITL---KDATDLIRNHILKTNLNLSSVLAI 2457
                  55699999***************************998...4444446666778889999999999...556678888899988888888875 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.28   3.6e+02       5      29 ..    1143    1167 ..    1140    1169 .. 0.83
   2 ?    5.2   0.1     0.025        32       2      29 ..    1322    1349 ..    1321    1351 .. 0.87
   3 !    8.7   0.0    0.0018       2.3       1      23 [.    1441    1463 ..    1441    1466 .. 0.94
   4 !    9.6   0.0    0.0009       1.2       1      28 [.    1479    1506 ..    1479    1508 .. 0.96
   5 !    9.7   0.0   0.00083       1.1       1      29 [.    1520    1548 ..    1520    1550 .. 0.90
   6 ?   -1.3   0.1         3   3.9e+03       1      12 [.    1558    1569 ..    1558    1571 .. 0.88
   7 !    6.9   0.0    0.0067       8.6      11      30 ..    1648    1667 ..    1638    1668 .. 0.90
   8 ?   -2.2   0.0       5.8   7.4e+03       2      18 ..    1716    1732 ..    1716    1733 .. 0.90
   9 ?    5.5   0.0     0.019        25       1      27 [.    1756    1782 ..    1756    1786 .. 0.86
  10 !   10.0   0.0   0.00071      0.91       1      29 [.    1794    1822 ..    1794    1824 .. 0.93
  11 ?   -2.4   0.0       6.5   8.3e+03       6      22 ..    1865    1881 ..    1860    1888 .. 0.71
  12 ?    2.4   0.0      0.19   2.5e+02       1      29 [.    1896    1927 ..    1896    1929 .. 0.94
  13 ?   -1.7   0.0       3.9     5e+03       1      26 [.    1937    1962 ..    1937    1964 .. 0.78
  14 !   10.9   0.0   0.00035      0.45       2      29 ..    1980    2007 ..    1979    2009 .. 0.87
  15 ?   -1.4   0.1       3.2   4.1e+03       1      13 [.    2017    2030 ..    2017    2042 .. 0.72
  16 ?   -1.4   0.0       3.2   4.1e+03       2      28 ..    2131    2157 ..    2131    2159 .. 0.87
  17 ?    2.5   0.0      0.18   2.3e+02       1      29 [.    2171    2199 ..    2171    2201 .. 0.90
  18 !    6.4   0.0    0.0099        13       1      29 [.    2239    2267 ..    2239    2269 .. 0.95
  19 !   10.4   0.0   0.00051      0.65       3      28 ..    2324    2350 ..    2322    2353 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.28
                  HHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT    5 llkllsDpspeVReaAakaLgalae 29  
                  ll+ l+ ++ + R+aAak++++ ++
  KHJ32468.1 1143 LLRFLEETDLKLRRAAAKSIAEAVK 1167
                  77888889999*********98776 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.025
                  HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT    2 lPlllkllsDpspeVReaAakaLgalae 29  
                  ++ ll  ls ps  V +a+a++L  l++
  KHJ32468.1 1322 VNRLLATLSTPSEAVQYAVAECLSPLVR 1349
                  678899999**************98876 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.0018
                  HHHHHHHHHT-SSHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAaka 23  
                  l+P ll+   D +p+VRe+++ a
  KHJ32468.1 1441 LVPQLLTGFGDVNPDVRESCLAA 1463
                  79******************976 PP

  == domain 4  score: 9.6 bits;  conditional E-value: 0.0009
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgala 28  
                  +lP+ll+ l+D+ ++  + A+  Lga+a
  KHJ32468.1 1479 ILPTLLNGLEDSQWRSKRGACDLLGAMA 1506
                  89************************98 PP

  == domain 5  score: 9.7 bits;  conditional E-value: 0.00083
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgalae 29  
                  ++P+l   l+D++ eVR aA ++L ++ e
  KHJ32468.1 1520 IIPPLTCVLNDSHKEVRLAANRSLKRFGE 1548
                  79999999************999999876 PP

  == domain 6  score: -1.3 bits;  conditional E-value: 3
                  HHHHHHHHHT-S CS
        HEAT    1 llPlllkllsDp 12  
                  l+++llk+l+Dp
  KHJ32468.1 1558 LVDVLLKALCDP 1569
                  6889*******8 PP

  == domain 7  score: 6.9 bits;  conditional E-value: 0.0067
                  -SSHHHHHHHHHHHHHHHHC CS
        HEAT   11 DpspeVReaAakaLgalaev 30  
                  Dp p  R++A kaLg l+e+
  KHJ32468.1 1648 DPVPTTRATASKALGSLIEK 1667
                  9****************986 PP

  == domain 8  score: -2.2 bits;  conditional E-value: 5.8
                  HHHHHHHHT-SSHHHHH CS
        HEAT    2 lPlllkllsDpspeVRe 18  
                  lP++l++  ++ +eVRe
  KHJ32468.1 1716 LPTILQNAVSSKSEVRE 1732
                  799****9999999997 PP

  == domain 9  score: 5.5 bits;  conditional E-value: 0.019
                  HHHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgal 27  
                  ++P++l+ l D+  ++Re++++a   l
  KHJ32468.1 1756 IIPIILQGLADELESIRETSLRAGRLL 1782
                  89******************9986555 PP

  == domain 10  score: 10.0 bits;  conditional E-value: 0.00071
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgalae 29  
                  llP l + l+D++ ++R ++ + +g+l+ 
  KHJ32468.1 1794 LLPELERGLTDNNYRIRLSSTELIGDLLF 1822
                  79************************975 PP

  == domain 11  score: -2.4 bits;  conditional E-value: 6.5
                  HHHHT-SSHHHHHHHHH CS
        HEAT    6 lkllsDpspeVReaAak 22  
                    + +D+s  VR +A  
  KHJ32468.1 1865 YICRCDTSGLVRTTAMG 1881
                  55559*******99965 PP

  == domain 12  score: 2.4 bits;  conditional E-value: 0.19
                  HHHHHHHHHT-...SSHHHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsD...pspeVReaAakaLgalae 29  
                  l+P+l +++ D   +spe+ e A ++L +l++
  KHJ32468.1 1896 LIPTLTRMIIDrlgSSPEQKEIAGNTLSELVR 1927
                  79**************************9986 PP

  == domain 13  score: -1.7 bits;  conditional E-value: 3.9
                  HHHHHHHHHT-SSHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLga 26  
                  llP+l + l++++++  +  + aL +
  KHJ32468.1 1937 LLPVLEEGLKSNDANSKQGICIALRE 1962
                  89*******99998777666666665 PP

  == domain 14  score: 10.9 bits;  conditional E-value: 0.00035
                  HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT    2 lPlllkllsDpspeVReaAakaLgalae 29  
                  + ++ k+l D++ +VRe+Aa+a+  l +
  KHJ32468.1 1980 ITVVRKALIDSDKNVRETAAEAFDSLQQ 2007
                  667899****************998876 PP

  == domain 15  score: -1.4 bits;  conditional E-value: 3.2
                  HHHHHHHHH.T-SS CS
        HEAT    1 llPlllkll.sDps 13  
                  +lP ll+ll sD +
  KHJ32468.1 2017 VLPYLLNLLrSDVE 2030
                  69*******55543 PP

  == domain 16  score: -1.4 bits;  conditional E-value: 3.2
                  HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT    2 lPlllkllsDpspeVReaAakaLgala 28  
                  + +l+ l ++++ + R+ +a+ L+++ 
  KHJ32468.1 2131 MSVLMALVKHQDHRKRAKTARYLAKFF 2157
                  56789999*************999876 PP

  == domain 17  score: 2.5 bits;  conditional E-value: 0.18
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgalae 29  
                  ++ +ll l  D + +V ++A  aL ++ +
  KHJ32468.1 2171 IIRTLLILFDDRDTDVSKTAWMALNEFTK 2199
                  678899999****************9987 PP

  == domain 18  score: 6.4 bits;  conditional E-value: 0.0099
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgalae 29  
                  +lP++l+ l+  + e+R  +a+a+ +++ 
  KHJ32468.1 2239 ILPIFLHGLMNGNLEQRIQSALAISDIVN 2267
                  89************************985 PP

  == domain 19  score: 10.4 bits;  conditional E-value: 0.00051
                  HHHHHHHT-SSHHH.HHHHHHHHHHHH CS
        HEAT    3 PlllkllsDpspeV.ReaAakaLgala 28  
                   ++ k+l D+s+e+ R+ Aa+aLg+l+
  KHJ32468.1 2324 RTFTKCLADTSSEIlRKRAALALGTLI 2350
                  5799*********88**********97 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       1.9   2.4e+03       3      26 ..    1154    1174 ..    1152    1179 .. 0.70
   2 !    6.5   0.1    0.0092        12      26      53 ..    1318    1345 ..    1306    1347 .. 0.91
   3 ?    3.0   0.0      0.12   1.5e+02      23      50 ..    1435    1462 ..    1432    1469 .. 0.90
   4 ?    5.2   0.1     0.025        32       2      40 ..    1455    1490 ..    1454    1491 .. 0.82
   5 !   32.1   0.1   9.2e-11   1.2e-07       1      54 [.    1492    1545 ..    1492    1546 .. 0.96
   6 ?    1.1   0.0      0.47     6e+02      22      42 ..    1551    1571 ..    1547    1573 .. 0.87
   7 !   10.3   0.0   0.00063      0.81       3      41 ..    1653    1688 ..    1651    1703 .. 0.79
   8 ?   -1.1   0.0       2.3   2.9e+03       5      46 ..    1694    1732 ..    1693    1737 .. 0.75
   9 ?   -0.9   0.0         2   2.6e+03      20      51 ..    1751    1778 ..    1741    1778 .. 0.68
  10 ?   -2.2   0.0       5.1   6.5e+03      26      41 ..    1791    1806 ..    1789    1818 .. 0.77
  11 ?    2.4   0.0      0.18   2.3e+02       8      55 .]    1882    1925 ..    1876    1925 .. 0.73
  12 !   10.1   0.0   0.00071      0.91      15      55 .]    1923    1963 ..    1912    1963 .. 0.86
  13 !    8.9   0.0    0.0017       2.2      21      52 ..    1971    2002 ..    1964    2005 .. 0.77
  14 ?    5.4   0.1     0.021        26      22      40 ..    2010    2028 ..    2004    2038 .. 0.83
  15 ?   -2.1   0.1       4.7     6e+03       7      40 ..    2068    2096 ..    2067    2098 .. 0.74
  16 ?    5.3   0.0     0.023        29       3      55 .]    2254    2307 ..    2252    2307 .. 0.91
  17 !   13.6   0.1   5.7e-05     0.073       6      55 .]    2299    2349 ..    2295    2349 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.9
     HEAT_EZ    3 vRraAawaLGrlaggepellqplv 26  
                  +RraAa  ++   +  +++  +++
  KHJ32468.1 1154 LRRAAAKSIA---EAVKNHPGTFL 1174
                  8********9...55555555544 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0092
     HEAT_EZ   26 vpeilpaLlalLnddsdeVRaaAagaLg 53  
                  vp ++  Lla+L+++s +V++a+a +L+
  KHJ32468.1 1318 VPLVVNRLLATLSTPSEAVQYAVAECLS 1345
                  889999********************98 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.12
     HEAT_EZ   23 qplvpeilpaLlalLnddsdeVRaaAag 50  
                  +p+v e++p+Ll +  d +++VR+ ++ 
  KHJ32468.1 1435 EPYVIELVPQLLTGFGDVNPDVRESCLA 1462
                  689999*********9*999***99875 PP

  == domain 4  score: 5.2 bits;  conditional E-value: 0.025
     HEAT_EZ    2 rvRraAawaLGrlaggepellqp.lvpeilpaLlalLndd 40  
                   vR+++++a       ++  l+   v++ilp Ll++L+d+
  KHJ32468.1 1455 DVRESCLAAA----KACFARLSSfGVKQILPTLLNGLEDS 1490
                  6788888888....66777777779*************98 PP

  == domain 5  score: 32.1 bits;  conditional E-value: 9.2e-11
     HEAT_EZ    1 wrvRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLgn 54  
                  wr +r+A+  LG++a  ++ +l++++pei+p+L   Lnd+++eVR aA + L +
  KHJ32468.1 1492 WRSKRGACDLLGAMAYLNSKQLAQNLPEIIPPLTCVLNDSHKEVRLAANRSLKR 1545
                  8889********************************************999865 PP

  == domain 6  score: 1.1 bits;  conditional E-value: 0.47
     HEAT_EZ   22 lqplvpeilpaLlalLnddsd 42  
                  ++p+++ +++ Ll++L+d+ +
  KHJ32468.1 1551 VNPEIKSLVDVLLKALCDPTK 1571
                  6899*************9975 PP

  == domain 7  score: 10.3 bits;  conditional E-value: 0.00063
     HEAT_EZ    3 vRraAawaLGr.laggepellqplvpeilpaLlalLndds 41  
                   R+ A  aLG+ +      l ++++p+++p L+++L++d 
  KHJ32468.1 1653 TRATASKALGSlI----EKLGEDALPDLIPSLMQTLKSDT 1688
                  6888999***644....599999999**********8885 PP

  == domain 8  score: -1.1 bits;  conditional E-value: 2.3
     HEAT_EZ    5 raAawaLGr.laggepellqplvpeilpaLlalLnddsd.eVRa 46  
                   + a aL++ lag +   l++ +p il   +     +s+ eVR+
  KHJ32468.1 1694 LGSAQALSEvLAGLGTSRLEDTLPTILQNAV-----SSKsEVRE 1732
                  5678899889999999999988887776666.....55557776 PP

  == domain 9  score: -0.9 bits;  conditional E-value: 2
     HEAT_EZ   20 ellqplvpeilpaLlalLnddsd.eVRaaAaga 51  
                  ++l+  +p il  L+     d+  ++R+++++a
  KHJ32468.1 1751 NYLSRIIPIILQGLA-----DELeSIRETSLRA 1778
                  455555666666666.....666588***9997 PP

  == domain 10  score: -2.2 bits;  conditional E-value: 5.1
     HEAT_EZ   26 vpeilpaLlalLndds 41  
                  v+ +lp+L ++L+d +
  KHJ32468.1 1791 VELLLPELERGLTDNN 1806
                  5679999999999977 PP

  == domain 11  score: 2.4 bits;  conditional E-value: 0.18
     HEAT_EZ    8 aw.aLGrlaggepellqplvpeilpaLlalLnd...dsdeVRaaAagaLgnl 55  
                  +w aL    +  p +l+    e++p L ++  d   +s+e ++ A  +L+ l
  KHJ32468.1 1882 VWkAL----VPTPKTLK----ELIPTLTRMIIDrlgSSPEQKEIAGNTLSEL 1925
                  55566....66777777....7777777666666669999999999999976 PP

  == domain 12  score: 10.1 bits;  conditional E-value: 0.00071
     HEAT_EZ   15 aggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55  
                   +  + +  +l+p +lp L  +L++ +++ ++  ++aL+ l
  KHJ32468.1 1923 SELVRKAGDGLLPNLLPVLEEGLKSNDANSKQGICIALREL 1963
                  36777888999***************************976 PP

  == domain 13  score: 8.9 bits;  conditional E-value: 0.0017
     HEAT_EZ   21 llqplvpeilpaLlalLnddsdeVRaaAagaL 52  
                  +l +++  ++    ++L d++++VR++Aa a+
  KHJ32468.1 1971 ALDDHQNTLITVVRKALIDSDKNVRETAAEAF 2002
                  5566677777777777778888*******996 PP

  == domain 14  score: 5.4 bits;  conditional E-value: 0.021
     HEAT_EZ   22 lqplvpeilpaLlalLndd 40  
                   + +v+++lp+Ll+lL++d
  KHJ32468.1 2010 GKRAVDQVLPYLLNLLRSD 2028
                  4569************887 PP

  == domain 15  score: -2.1 bits;  conditional E-value: 4.7
     HEAT_EZ    7 AawaLGrlaggepellqplvpeilpaLlalLndd 40  
                  +a+a+++la +++ ++   +++i+ aL+     d
  KHJ32468.1 2068 NARAIASLATVAGSAMTRKLQAIMNALM-----D 2096
                  5778888778878887777788888888.....5 PP

  == domain 16  score: 5.3 bits;  conditional E-value: 0.023
     HEAT_EZ    3 vRraAawaLGrlaggepel.lqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55  
                  +R   a+a++ + +  +e+ l+p+v++i  +L++  +  s + + aA+ +L nl
  KHJ32468.1 2254 QRIQSALAISDIVNKTSEDfLKPFVSQITGPLIRVVSERSIDLKSAALFTLNNL 2307
                  68889999988999999999****************9999999*******9886 PP

  == domain 17  score: 13.6 bits;  conditional E-value: 5.7e-05
     HEAT_EZ    6 aAawaLGr.laggepellqplvpeilpaLlalLnddsdeV.RaaAagaLgnl 55  
                  aA+ +L + l+g  p ll+p+ p++ + + ++L d s+e+ R+ Aa aLg l
  KHJ32468.1 2299 AALFTL-NnLLGKIPTLLKPFMPQLQRTFTKCLADTSSEIlRKRAALALGTL 2349
                  677799.5599999************************999********976 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       7.1   9.1e+03      29      58 ..     425     454 ..     421     463 .. 0.83
   2 ?    3.9   0.0     0.055        71      36      69 ..    1143    1179 ..    1134    1185 .. 0.72
   3 !   10.1   0.0   0.00065      0.83      32      83 ..    1321    1379 ..    1306    1384 .. 0.75
   4 !   21.5   0.0   1.8e-07   0.00023       3      88 .]    1444    1544 ..    1441    1544 .. 0.77
   5 !   24.0   0.0   2.9e-08   3.7e-05       1      76 [.    1480    1571 ..    1480    1580 .. 0.81
   6 !   13.4   0.3   6.2e-05     0.079      15      87 ..    1610    1700 ..    1596    1701 .. 0.78
   7 ?    1.2   0.0      0.38   4.9e+02      19      50 ..    1702    1733 ..    1700    1737 .. 0.87
   8 ?   -1.6   0.0       2.9   3.7e+03      33      49 ..    1795    1811 ..    1749    1820 .. 0.49
   9 !   17.2   1.8   3.8e-06    0.0049       2      78 ..    1939    2032 ..    1934    2042 .. 0.73
  10 ?    5.3   0.2     0.021        27       1      71 [.    2018    2091 ..    2018    2094 .. 0.87
  11 !   11.0   0.0   0.00034      0.43       4      59 ..    2134    2198 ..    2131    2215 .. 0.78
  12 !    8.4   0.0    0.0022       2.8       5      56 ..    2327    2383 ..    2284    2409 .. 0.66

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 7.1
      HEAT_2  29 npealpaLvellededpavRraaaeaLgai 58 
                 +++++ a+++ ++d++p + ++ +  Lg +
  KHJ32468.1 425 DKDVISAIINGISDKKPFIKKTWILFLGNF 454
                 779999*************99999999976 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.055
      HEAT_2   36 LvellededpavRraaaeaLgai.gd.pe.alpaLke 69  
                  L+++le +d   Rraaa+++++  ++ p  +l++L++
  KHJ32468.1 1143 LLRFLEETDLKLRRAAAKSIAEAvKNhPGtFLQVLEK 1179
                  7888999999999999999985323223325666655 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.00065
      HEAT_2   32 alpaLvellededpavRraaaeaLg.....aigd.pe.alpaLkellddddddvvReaA 83  
                  +++ L+  l+++++av++a+ae L+      +++ ++ + ++L +l++++d + +R aA
  KHJ32468.1 1321 VVNRLLATLSTPSEAVQYAVAECLSplvrvSVDNvKDyVQNVLDRLFNSKDYAGRRGAA 1379
                  68999999****************85443333433334778999999998888888765 PP

  == domain 4  score: 21.5 bits;  conditional E-value: 1.8e-07
      HEAT_2    3 aLlqalendpdpevrraairaLg.......rignpealpaLvellededpavRraaaeaLgaig..........dpealpaLkellddddddvvRea 82  
                  +Ll     d +p+vr   + a         ++g +++lp+L++ led+ ++  r a++ Lga++          +pe +p L+  l +d++ +vR a
  KHJ32468.1 1444 QLLTGF-GDVNPDVRESCLAAAKacfarlsSFGVKQILPTLLNGLEDSQWRSKRGACDLLGAMAylnskqlaqnLPEIIPPLTCVL-NDSHKEVRLA 1538
                  555555.6778888877777766666766689999**************************9944444444444799******766.6788889999 PP

      HEAT_2   83 AaeaLa 88  
                  A ++L+
  KHJ32468.1 1539 ANRSLK 1544
                  999885 PP

  == domain 5  score: 24.0 bits;  conditional E-value: 2.9e-08
      HEAT_2    1 ldaLlqalendpdpevrraairaLg..........rignpealpaLvellededpavRraaaeaLgaigd.......pealpaLkellddddd 76  
                  l++Ll+ l +d+ +  +r a++ Lg           ++ pe++p L+ +l+d++ +vR aa ++L ++g+       ++ +++L+++l d+++
  KHJ32468.1 1480 LPTLLNGL-EDSQWRSKRGACDLLGamaylnskqlAQNLPEIIPPLTCVLNDSHKEVRLAANRSLKRFGEaivnpeiKSLVDVLLKALCDPTK 1571
                  689*****.9***************998777764333456****************************9544443445578888888877665 PP

  == domain 6  score: 13.4 bits;  conditional E-value: 6.2e-05
      HEAT_2   15 evrraairaLgrignp.......ealpaLvell....ededpavRraaaeaLgai....gd...pealpaLkellddddddvvReaAaeaL 87  
                  +++r+a +++g +++        + lp+Lv+ l     d+ p +R++a +aLg +    g+   p+ +p+L + l++d+ +  R  +a+aL
  KHJ32468.1 1610 ATKRKASQVIGGLAHLterkdliSHLPILVSGLkiatVDPVPTTRATASKALGSLieklGEdalPDLIPSLMQTLKSDTGAGDRLGSAQAL 1700
                  56778888888666554556666779999998866555899************5544445334499*************999999999998 PP

  == domain 7  score: 1.2 bits;  conditional E-value: 0.38
      HEAT_2   19 aairaLgrignpealpaLvellededpavRra 50  
                  +++  Lg+ + +++lp++++ + +++++vR+ 
  KHJ32468.1 1702 EVLAGLGTSRLEDTLPTILQNAVSSKSEVREG 1733
                  567889999999**********9999999975 PP

  == domain 8  score: -1.6 bits;  conditional E-value: 2.9
      HEAT_2   33 lpaLvellededpavRr 49  
                  lp L + l+d + ++R 
  KHJ32468.1 1795 LPELERGLTDNNYRIRL 1811
                  44444444444444444 PP

  == domain 9  score: 17.2 bits;  conditional E-value: 3.8e-06
      HEAT_2    2 daLlqalendpdpevrraairaLg.rignp..........ealpaLvellededpavRraaaeaL.......gaigdpealpaLkellddddddv 78  
                  ++L + l ++ d + ++ +++aL   ig+           +++  ++++l d+d +vR++aaea        g+ + +++lp L+ ll++d +++
  KHJ32468.1 1939 PVLEEGL-KSNDANSKQGICIALReLIGSAsiealddhqnTLITVVRKALIDSDKNVRETAAEAFdslqqllGKRAVDQVLPYLLNLLRSDVEAE 2032
                  6677777.7888999999999999535665444444444456999999**************98733333334556799***********98876 PP

  == domain 10  score: 5.3 bits;  conditional E-value: 0.021
      HEAT_2    1 ldaLlqalendpdpevrraairaLg..rignpealpaLvell.ededpavRraaaeaLgaigdpealpaLkell 71  
                  l++Ll++l++d + e +  a+ +L   + ++  +lp L++ l +++ +   + a+ +L+ ++ ++  + L++++
  KHJ32468.1 2018 LPYLLNLLRSDVEAENALSALLTLLteTTRSSIILPSLIPSLiSSPISSFNARAIASLATVAGSAMTRKLQAIM 2091
                  6899****99999999998887777666788888******888******************9999999999877 PP

  == domain 11  score: 11.0 bits;  conditional E-value: 0.00034
      HEAT_2    4 LlqalendpdpevrraairaLg..........rignpealpaLvellededpavRraaaeaLgaig 59  
                  L++ l+++ d+  r++++r L+          +  n++++++L+ l +d d++v ++a +aL ++ 
  KHJ32468.1 2134 LMA-LVKHQDHRKRAKTARYLAkffeettldySRFNQDIIRTLLILFDDRDTDVSKTAWMALNEFT 2198
                  444.559***************66666555433334599***********************9985 PP

  == domain 12  score: 8.4 bits;  conditional E-value: 0.0022
      HEAT_2    5 lqalendpdpevrraairaLgrign..pealpaLvell...ededpavRraaaeaLg 56  
                   + l++ +++ +r++a+ aLg++ +  p++ p++ el+   +++d  vR a+ +aL 
  KHJ32468.1 2327 TKCLADTSSEILRKRAALALGTLITliPRVDPLIAELCtgaKTSDLGVRIAIMKALY 2383
                  455655555556777777777543322444333333333226666777777777775 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       2.3   2.9e+03      32      69 ..    1143    1180 ..    1137    1191 .. 0.85
   2 ?    5.2   0.0     0.025        32      23      75 ..    1316    1368 ..    1299    1378 .. 0.87
   3 ?    1.9   0.0      0.27   3.4e+02       2      44 ..    1415    1457 ..    1414    1468 .. 0.93
   4 !    8.9   0.0    0.0017       2.2      23      89 ..    1474    1540 ..    1459    1546 .. 0.84
   5 !    8.4   0.0    0.0026       3.3       4      81 ..    1496    1570 ..    1493    1583 .. 0.76
   6 ?    3.3   0.0       0.1   1.3e+02      11      46 ..    1739    1774 ..    1729    1816 .. 0.79
   7 !    7.2   0.0    0.0059       7.5      19      62 ..    1970    2013 ..    1951    2034 .. 0.70
   8 ?   -1.5   0.0       3.2     4e+03       7      41 ..    2072    2106 ..    2068    2114 .. 0.66
   9 ?    3.7   0.1     0.074        95      21      66 ..    2164    2209 ..    2147    2220 .. 0.88
  10 ?    0.1   0.0      0.96   1.2e+03      25      95 ..    2236    2308 ..    2229    2310 .. 0.82
  11 ?    0.4   0.0      0.78     1e+03      20      84 ..    2270    2337 ..    2253    2351 .. 0.76
  12 ?   -0.1   0.0       1.1   1.4e+03      22      82 ..    2353    2414 ..    2340    2422 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 2.3
  Vac14_Fab1_bd   32 vlkcfsDkdsrvRyyacEslyniakvakgevlkllnei 69  
                     +l+ ++++d ++R  a+ s+   +k   g++l++l+++
     KHJ32468.1 1143 LLRFLEETDLKLRRAAAKSIAEAVKNHPGTFLQVLEKL 1180
                     67889999*********************999988876 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.025
  Vac14_Fab1_bd   23 eyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvk 75  
                     + +  +v+ +l+++s  ++ v y ++E+l  +++v+ ++v  ++++++d l++
     KHJ32468.1 1316 KRVPLVVNRLLATLSTPSEAVQYAVAECLSPLVRVSVDNVKDYVQNVLDRLFN 1368
                     556678999************************************99998865 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.27
  Vac14_Fab1_bd    2 arkggligLaavaialekkikeyleeivkpvlkcfsDkdsrvR 44  
                     +r+g+ ++   ++  l+ + ++y+ e+v+ +l+ f D +  vR
     KHJ32468.1 1415 HREGAFLAYELLSTILHGAFEPYVIELVPQLLTGFGDVNPDVR 1457
                     79999999999***************************99998 PP

  == domain 4  score: 8.9 bits;  conditional E-value: 0.0017
  Vac14_Fab1_bd   23 eyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksgae 89  
                       +++i++++l+ ++D++ r +  ac+ l  +a    +++ ++l ei   l+ ++ Ds+++v+ +a+
     KHJ32468.1 1474 FGVKQILPTLLNGLEDSQWRSKRGACDLLGAMAYLNSKQLAQNLPEIIPPLTCVLNDSHKEVRLAAN 1540
                     5578999999999999999999999999999999999999999999999999999999999998885 PP

  == domain 5  score: 8.4 bits;  conditional E-value: 0.0026
  Vac14_Fab1_bd    4 kggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlk.llneifdalvklvaDsd 81  
                     +g+   L a+a   +k++++ l ei++p+  +++D+ ++vR  a  sl    k   +++++  ++++ d+l k ++D  
     KHJ32468.1 1496 RGACDLLGAMAYLNSKQLAQNLPEIIPPLTCVLNDSHKEVRLAANRSL----KRFGEAIVNpEIKSLVDVLLKALCDPT 1570
                     555556677777777889***************************998....555555554478888888888888875 PP

  == domain 6  score: 3.3 bits;  conditional E-value: 0.1
  Vac14_Fab1_bd   11 aavaialekkikeyleeivkpvlkcfsDkdsrvRyy 46  
                      ++ +  +++ ++yl++i++++l+ + D+ + +R +
     KHJ32468.1 1739 IFLPVCFGNSFANYLSRIIPIILQGLADELESIRET 1774
                     456678889999****************99999865 PP

  == domain 7  score: 7.2 bits;  conditional E-value: 0.0059
  Vac14_Fab1_bd   19 kkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgev 62  
                     ++++++ ++++++v k++ D+d+ vR +a+E++  + + + +++
     KHJ32468.1 1970 EALDDHQNTLITVVRKALIDSDKNVRETAAEAFDSLQQLLGKRA 2013
                     347889999*********************99866665554444 PP

  == domain 8  score: -1.5 bits;  conditional E-value: 3.2
  Vac14_Fab1_bd    7 ligLaava.ialekkikeyleeivkpvlkcfsDkds 41  
                     + +La+va  a+++k++ +++ +++ ++ c++D++ 
     KHJ32468.1 2072 IASLATVAgSAMTRKLQAIMNALMDNII-CCKDTEL 2106
                     4556665523566668888888888776.6777765 PP

  == domain 9  score: 3.7 bits;  conditional E-value: 0.074
  Vac14_Fab1_bd   21 ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkll 66  
                      +++ ++i++++l  f+D+d+ v  +a  +l   +k +k+e +++l
     KHJ32468.1 2164 YSRFNQDIIRTLLILFDDRDTDVSKTAWMALNEFTKRLKKEEMETL 2209
                     578899*********************9999999999999877765 PP

  == domain 10  score: 0.1 bits;  conditional E-value: 0.96
  Vac14_Fab1_bd   25 leeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlk.llneifdalvklvaDsdesvksgael.ldrll 95  
                     ++ i+++ l+ +   + + R  ++ ++  i+ ++ +++lk ++++i   l+++v++   ++ks+a + l++ll
     KHJ32468.1 2236 INAILPIFLHGLMNGNLEQRIQSALAISDIVNKTSEDFLKpFVSQITGPLIRVVSERSIDLKSAALFtLNNLL 2308
                     67888888999888888889999999999999999999984668899999*****999999999864266665 PP

  == domain 11  score: 0.4 bits;  conditional E-value: 0.78
  Vac14_Fab1_bd   20 k...ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesv 84  
                     +   +k+++++i  p+++++s+++  ++  a  +l n+  ++ + +  ++ ++  +++k +aD+ +++
     KHJ32468.1 2270 SedfLKPFVSQITGPLIRVVSERSIDLKSAALFTLNNLLGKIPTLLKPFMPQLQRTFTKCLADTSSEI 2337
                     23457888899999999999999999999999999999999999888899999999999999988876 PP

  == domain 12  score: -0.1 bits;  conditional E-value: 1.1
  Vac14_Fab1_bd   22 keyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlk.llneifdalvklvaDsde 82  
                      + ++ +++ + +  + +d  vR   + +ly ++ +a +++    + +i +++ + + D+d 
     KHJ32468.1 2353 IPRVDPLIAELCTGAKTSDLGVRIAIMKALYEVVNKAGTKINDtSIASISNIIKSEIEDNDL 2414
                     456778888888999999999*************9998887653567777777766666665 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       2.7   3.5e+03      20      51 ..      23      55 ..      22      85 .. 0.84
   2 ?   -3.7   0.0       5.5     7e+03     141     183 ..    1247    1285 ..    1245    1286 .. 0.73
   3 ?    4.5   0.0     0.018        23      79     199 ..    1425    1542 ..    1409    1552 .. 0.75
   4 ?    2.5   0.0     0.072        92      73     140 ..    1498    1564 ..    1490    1620 .. 0.80
   5 !    5.9   0.0    0.0066       8.4      45     215 ..    1636    1794 ..    1609    1802 .. 0.79
   6 !    7.5   0.0    0.0022       2.8      53     160 ..    1714    1823 ..    1699    1840 .. 0.86
   7 !    8.3   0.0    0.0012       1.5     118     211 ..    1922    2013 ..    1890    2018 .. 0.76
   8 ?    0.7   1.9      0.26   3.3e+02      31     207 ..    2025    2201 ..    2020    2219 .. 0.71
   9 !   19.5   0.1   4.4e-07   0.00056       5     189 ..    2236    2413 ..    2233    2423 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2.7
     CLASP_N 20 nwdaReknilklrslikgn.vpedaveellecl 51
                +++ R + + +l   ++ n v++++v+++l++l
  KHJ32468.1 23 SIKLRLEGLHTLEDCLSKNeVKNEFVPSILKLL 55
                678888899999999999999999999888765 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 5.5
     CLASP_N  141 dKnvqpReysaiwLkilltrfeshkskleasllldliekslkk 183 
                  dKn q R  +++   +++t ++    k+e ++l++++e++l k
  KHJ32468.1 1247 DKNLQVRKEMINASVMIITIHG----KVEVEGLMKTLEETLEK 1285
                  8999999877776666666666....88888888888888866 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.018
     CLASP_N   79 elaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnas.f.sprilqvlsvalqdKnvqpReysaiwLkilltrfeshkskleasll 173 
                   l+ +l+ +++p+v  l+p Ll+  gd    ++++  +a +a ++ +s f  ++il  l ++l+d   + +  ++ +L  +    +   ++l ++l 
  KHJ32468.1 1425 LLSTILHGAFEPYVIELVPQLLTGFGDVNPDVRESCLAAAKACFARLSsFgVKQILPTLLNGLEDSQWRSKRGACDLLGAMAYLNS---KQLAQNL- 1517
                  46677788899999999999999998888777776555555555555432147778999999999999999999999999988877...6666666. PP

     CLASP_N  174 ldliekslkkgleDanptVRetaRst 199 
                    +i + l+++l+D+  +VR +a   
  KHJ32468.1 1518 -PEIIPPLTCVLNDSHKEVRLAANRS 1542
                  .7899999999999999999877655 PP

  == domain 4  score: 2.5 bits;  conditional E-value: 0.072
     CLASP_N   73 gchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnasfsprilqvlsvalq 140 
                  +c ll  +a  + +ql++ +  ++p L  +l d  k ++ +an +l+ + +++  +p+i +++ v+l+
  KHJ32468.1 1498 ACDLLGAMAYLNSKQLAQNLPEIIPPLTCVLNDSHKEVRLAANRSLKRFGEAIV-NPEIKSLVDVLLK 1564
                  8999*****************************************999988887.8888777777665 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.0066
     CLASP_N   45 eelleclkqlleailkalssLrttlsstgchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnasfsprilqvlsvalqd 141 
                  + l+++lk    a ++ +   r t s+++++l+++l +   ++l  ++ +l++tL    g+   + s++a   + a l    ++  + ++l++a++ 
  KHJ32468.1 1636 PILVSGLK---IATVDPVPTTRATASKALGSLIEKLGE---DALPDLIPSLMQTLKSDTGAGDRLGSAQALSEVLAGLGTSRLEDTLPTILQNAVSS 1726
                  56777777...788888888888888888888877643...4488888999*******************99999999999989999********** PP

     CLASP_N  142 KnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanptVRetaRstfweffkvwPsrAksll 215 
                  K+   Re  + +   l   f+   +++ + l  + i +++ +gl+D   ++Ret+  +   + k++ +r+ +ll
  KHJ32468.1 1727 KSEV-REGFISLFIFLPVCFG---NSFANYL--SRIIPIILQGLADELESIRETSLRAGRLLVKNFSTRSVELL 1794
                  *965.5555554444555555...4455544..7899****************998888888888888888877 PP

  == domain 6  score: 7.5 bits;  conditional E-value: 0.0022
     CLASP_N   53 qlleailkalssLrttlsstgchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnas.fspri.lqvlsvalqdKnvqpR 147 
                  ++l  il+++ s  + +    ++l+  l   +++++++++ +++p++l+ l+d  + i++++  a   l++n s  s ++ l  l+ +l+d n+++R
  KHJ32468.1 1714 DTLPTILQNAVSSKSEVREGFISLFIFLPVCFGNSFANYLSRIIPIILQGLADELESIRETSLRAGRLLVKNFStRSVELlLPELERGLTDNNYRIR 1810
                  5667788888999999999999999999999*****************************************9944556778999************ PP

     CLASP_N  148 eysaiwLkilltr 160 
                  + s++++  ll +
  KHJ32468.1 1811 LSSTELIGDLLFN 1823
                  ****998776655 PP

  == domain 7  score: 8.3 bits;  conditional E-value: 0.0012
     CLASP_N  118 laallsnas..fsprilqvlsvalqdKnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanptVRetaRstfweffkvwPsrA 211 
                  l+ l+++a+  + p +l vl+ +l+   ++ ++  +i L+ l+ + +   ++l+ ++  +++  +++k+l D++ +VReta ++f ++ +   +rA
  KHJ32468.1 1922 LSELVRKAGdgLLPNLLPVLEEGLKSNDANSKQGICIALRELIGSAS--IEALDDHQ--NTLITVVRKALIDSDKNVRETAAEAFDSLQQLLGKRA 2013
                  55555555544556677777777888888888889999999998888..55555566..56789*****************999988887766665 PP

  == domain 8  score: 0.7 bits;  conditional E-value: 0.26
     CLASP_N   31 lrslikgn.vpedaveelleclkqlleailkalssLrttlsstgchllkelaiqlkeqldpmveillptLlk...llgdtK.kiisqnanqalaall 122 
                  lrs+++ + + +     l+e  ++++ + +   s +++ +ss     +  la + ++++   ++++++ L++   ++ dt  +i   +++ ++   +
  KHJ32468.1 2025 LRSDVEAEnALSALLTLLTETTRSSIILPSLIPSLISSPISSFNARAIASLATVAGSAMTRKLQAIMNALMDniiCCKDTElEIELDASFLTVIMSV 2121
                  6777776667777777777777755544444445555556666677777777777777777777777777663334555542455566666777777 PP

     CLASP_N  123 snasfsprilqvlsvalqdKnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanptVRetaRstfweffkvw 207 
                   +    +  ++vl+++++   ++ R+  a +L+ ++++ +     l++s   + i  +l  +  D ++ V +ta +++ ef+k  
  KHJ32468.1 2122 DEFDGLNTSMSVLMALVKHQDHRKRAKTARYLAKFFEETT-----LDYSRFNQDIIRTLLILFDDRDTDVSKTAWMALNEFTKRL 2201
                  777767777999999999999************9999999.....6666666677788888889999999888888888887755 PP

  == domain 9  score: 19.5 bits;  conditional E-value: 4.4e-07
     CLASP_N    5 aeellaafegketelnwdaReknilklrslikgnvpedaveelleclkqlleailkalssLrttlsstgchllkelaiqlkeqldpmveillptLlk 101 
                  ++ +l++f     + n ++R ++ l +  +++   +ed+ +++++ +      +++ +s+ +  l s+++ +l +l+    + l+p++ +l  t+ k
  KHJ32468.1 2236 INAILPIFLHGLMNGNLEQRIQSALAISDIVNKT-SEDFLKPFVSQIT---GPLIRVVSERSIDLKSAALFTLNNLLGKIPTLLKPFMPQLQRTFTK 2328
                  56788888888899*************8887766.*************...7777777777777777788888888888888889999999999999 PP

     CLASP_N  102 llgdtK.kiisqnanqalaallsnasfsprilqvlsvalqdKnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDan 189 
                  +l+dt  +i ++ a+ al +l++ ++    ++  l ++++      R+  ++ L  ++++ +    k++ +++  +i +++k+ +eD +
  KHJ32468.1 2329 CLADTSsEILRKRAALALGTLITLIPRVDPLIAELCTGAKTSDLGVRIAIMKALYEVVNKAG---TKINDTSI-ASISNIIKSEIEDND 2413
                  999985389****************9444444444444444456679999999999999988...88888884.599999999999987 PP

>> ParcG  Parkin co-regulated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       8.4   1.1e+04      78     111 ..    1318    1351 ..    1304    1366 .. 0.68
   2 !    9.0   0.0    0.0011       1.4      34     117 ..    1474    1554 ..    1456    1575 .. 0.81
   3 ?    0.6   0.0      0.42   5.3e+02      39      93 ..    1634    1692 ..    1626    1708 .. 0.77
   4 !    8.2   0.1     0.002       2.5      38     128 ..    1936    2027 ..    1932    2054 .. 0.82
   5 !   11.1   0.1   0.00026      0.33      38     129 ..    2238    2326 ..    2235    2350 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 8.4
       ParcG   78 lpklilplkeaLntrdeeviesaLkvlqklvkas 111 
                  +p ++  l + L+t +e+v  ++ ++l+ lv++s
  KHJ32468.1 1318 VPLVVNRLLATLSTPSEAVQYAVAECLSPLVRVS 1351
                  3445555667788888888888888888887765 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0011
       ParcG   34 LdydalLplffdGlretkhpyrflategikdllea...ageekilpvlpklilplkeaLntrdeeviesaLkvlqklvkaseligea 117 
                  +  +++Lp++++Gl +++      +++g+ dll a    +++++ + lp++i pl   Ln +++ev  +a + l+++   + ++ ++
  KHJ32468.1 1474 FGVKQILPTLLNGLEDSQ----WRSKRGACDLLGAmayLNSKQLAQNLPEIIPPLTCVLNDSHKEVRLAANRSLKRF--GEAIVNPE 1554
                  567899********9865....55788888888887777889*************************9999999998..44444444 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.42
       ParcG   39 lLplffdGlretk.hp...yrflategikdlleaageekilpvlpklilplkeaLntrd 93  
                   Lp+++ Gl+  + +p    r+ a +++  l+e+ ge+ + +++p l+  lk++  + d
  KHJ32468.1 1634 HLPILVSGLKIATvDPvptTRATASKALGSLIEKLGEDALPDLIPSLMQTLKSDTGAGD 1692
                  68888899875431443335789999999********99999*****999998766665 PP

  == domain 4  score: 8.2 bits;  conditional E-value: 0.002
       ParcG   38 alLplffdGlretkhpyrflategikdlleaageekilpvlpklilplkeaLntrdeevies...aLkvlqklvkaseligeaLvpyyrqlLpv 128 
                  +lLp++ +Gl+ ++   +     ++++l+ +a+ e + +  + li+ +++aL  +d++v e+   a++ lq+l   ++   ++  py+ +lL  
  KHJ32468.1 1936 NLLPVLEEGLKSNDANSKQGICIALRELIGSASIEALDDHQNTLITVVRKALIDSDKNVRETaaeAFDSLQQL--LGKRAVDQVLPYLLNLLRS 2027
                  6899999999999999888888889999999888899999999*********999998876511156677777..6667777888999999975 PP

  == domain 5  score: 11.1 bits;  conditional E-value: 0.00026
       ParcG   38 alLplffdGlretkhpyrflategikdlleaageekilpvlpklilplkeaLntrdeeviesaLkvlqklvkaseligeaLvpyyrqlLpvl 129 
                  a+Lp+f+ Gl++ +   r+ +  +i+d++++++e+ + p + ++  pl + ++ r+ +   +aL +l++l      i + L p++ ql  ++
  KHJ32468.1 2238 AILPIFLHGLMNGNLEQRIQSALAISDIVNKTSEDFLKPFVSQITGPLIRVVSERSIDLKSAALFTLNNL---LGKIPTLLKPFMPQLQRTF 2326
                  79*****************************99*9***********************************...7789999999999986665 PP

>> FANCI_S2  FANCI solenoid 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.8   3.6e+03      42      92 ..     408     457 ..     378     468 .. 0.75
   2 ?   -1.5   0.2       2.1   2.7e+03      60     126 ..    1031    1094 ..     994    1111 .. 0.69
   3 !    7.2   0.0    0.0044       5.6     105     163 ..    1323    1382 ..    1317    1383 .. 0.89
   4 !   11.8   0.0   0.00017      0.22     134     163 ..    1973    2002 ..    1891    2002 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.8
    FANCI_S2  42 aklgsqiLlelfkvhesarseiieqllsriitkseeevsqyiklLselvks 92 
                 ++l   +L+ +f+  e++ +++i+ +++ i  k++   + +i  L++  +s
  KHJ32468.1 408 HTLLHFLLQGVFN-GEKIDKDVISAIINGISDKKPFIKKTWILFLGNFYMS 457
                 4455556666666.688999*************999999999888887665 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 2.1
    FANCI_S2   60 rseiieqllsriitkseeevsqyiklLselvksapltllesssklkelldylsflpletatallkAl 126 
                  r+ i+  l+  +++ ++   + + ++Ls+l++    ++    s++  ll  + + ++++ t +l+++
  KHJ32468.1 1031 REIILTVLITSMQIYNHH-YKIVKDCLSNLCRCIAPNIT--NSEIAILLRGIIVPQKSVRTSILQSI 1094
                  445555556666666555.57788999999998777774..56666666666666666666666665 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0044
    FANCI_S2  105 kelldylsflpletatallkAllPLlkvs.eslrdalilvLRKalfsreldaRkiAvaGf 163 
                  ++ll  ls  ++++  a+ + l+PL++vs  +++d++  vL +   s++   R+ A  G+
  KHJ32468.1 1323 NRLLATLSTPSEAVQYAVAECLSPLVRVSvDNVKDYVQNVLDRLFNSKDYAGRRGAAYGL 1382
                  6788888888888888999**********778**********************999986 PP

  == domain 4  score: 11.8 bits;  conditional E-value: 0.00017
    FANCI_S2  134 eslrdalilvLRKalfsreldaRkiAvaGf 163 
                   + +++li+v+RKal+ ++ ++R++A  +f
  KHJ32468.1 1973 DDHQNTLITVVRKALIDSDKNVRETAAEAF 2002
                  456778********************9988 PP

>> TIP120  TATA-binding protein interacting (TIP20)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.7   2.2e+03      64      99 ..     426     462 ..     409     488 .. 0.74
   2 ?    3.9   0.0     0.031        39      45      86 ..    1421    1462 ..    1416    1469 .. 0.89
   3 !   10.8   0.0   0.00024      0.31      52     120 ..    1462    1534 ..    1455    1542 .. 0.85
   4 ?   -0.3   0.0      0.63     8e+02      54      88 ..    1782    1817 ..    1765    1822 .. 0.82
   5 ?   -2.2   0.0       2.4     3e+03      97     144 ..    2081    2121 ..    2062    2142 .. 0.62

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.7
      TIP120  64 selldrvlaGlsDe.hdikllcnlmlsklvalapeev 99 
                 +++++ +++G+sD+   ik +  l l ++    +e+v
  KHJ32468.1 426 KDVISAIINGISDKkPFIKKTWILFLGNFYMSMEEDV 462
                 578899********88999999999988877666553 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.031
      TIP120   45 aaYetlytlletaldrldlselldrvlaGlsDe.hdikllcnl 86  
                  +aYe+l t+l  a++   ++el+ ++l+G++D   d++  c+ 
  KHJ32468.1 1421 LAYELLSTILHGAFEP-YVIELVPQLLTGFGDVnPDVRESCLA 1462
                  59**********9986.7899***********999**998865 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 0.00024
      TIP120   52 tlletaldrld...lselldrvlaGlsDe.hdikllcnlmlsklvalapeevlerldelvealrktlskklke 120 
                  +  ++++ rl+   ++++l ++l+Gl+D+    k  ++ +l  +++l+ ++++++l e++ +l+ +l+   ke
  KHJ32468.1 1462 AAAKACFARLSsfgVKQILPTLLNGLEDSqWRSKRGACDLLGAMAYLNSKQLAQNLPEIIPPLTCVLNDSHKE 1534
                  445566666555559**************8899999********************************99887 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 0.63
      TIP120   54 letaldrldlselldrvlaGlsDe.hdikllcnlml 88  
                  l + ++  +++ ll ++++Gl+D+ + i+l +  ++
  KHJ32468.1 1782 LVKNFSTRSVELLLPELERGLTDNnYRIRLSSTELI 1817
                  4445788899999***********999999887655 PP

  == domain 5  score: -2.2 bits;  conditional E-value: 2.4
      TIP120   97 eevlerldelvealrktlskklkekavkqelEkqeelkrsvlrvvaal 144 
                  ++       ++++l++++++ +++    +++E + el  s l v+ ++
  KHJ32468.1 2081 SA-------MTRKLQAIMNALMDNIICCKDTELEIELDASFLTVIMSV 2121
                  44.......455555555555555556666666666666666666665 PP

>> DUF937  Bacterial protein of unknown function (DUF937)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0037       4.7      27      59 ..    1473    1506 ..    1468    1553 .. 0.84
   2 ?    3.5   0.1     0.079     1e+02      19      80 ..    1661    1724 ..    1648    1738 .. 0.51
   3 ?    0.9   0.0      0.52   6.7e+02      32      93 ..    1899    1969 ..    1889    1987 .. 0.67
   4 ?    3.1   0.1      0.11   1.4e+02      27      60 ..    2011    2044 ..    1990    2097 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0037
      DUF937   27 esalsaalpallgalaqna.aspgGlgdLlgall 59  
                  + +++++lp+ll++l   + +s++G+ dLlga+ 
  KHJ32468.1 1473 SFGVKQILPTLLNGLEDSQwRSKRGACDLLGAMA 1506
                  679*************999899*********994 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.079
      DUF937   19 lGedeaq.aesalsaalpallgalaqnaaspgGlgdLlgallg.....gglggggLgdllsllqnggl 80  
                  lG   ++  e+al  ++p+l++ l++ +    G+gd lg+++       glg + L+d l  + ++ +
  KHJ32468.1 1661 LGSLIEKlGEDALPDLIPSLMQTLKSDT----GAGDRLGSAQAlsevlAGLGTSRLEDTLPTILQNAV 1724
                  3333333234555555555555555555....333333333333333456666666665554444444 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.52
      DUF937   32 aalpallgalaqnaaspgGlgdLlgallggglggggLgdllsllqngglgeqaqswd..........gpaiL 93  
                  +++ ++   l++  ++++ +g+ l+ l + + g g L +ll +l++g  ++ a+s++          g+a +
  KHJ32468.1 1899 TLTRMIIDRLGSSPEQKEIAGNTLSELVR-KAGDGLLPNLLPVLEEGLKSNDANSKQgicialreliGSASI 1969
                  45667777777777888888888888875.555599********9998888888874344444444444443 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.11
      DUF937   27 esalsaalpallgalaqnaaspgGlgdLlgallg 60  
                  ++a++++lp ll++l +  ++++ l+ Ll+ l++
  KHJ32468.1 2011 KRAVDQVLPYLLNLLRSDVEAENALSALLTLLTE 2044
                  789*************************997754 PP

>> Tti2  Tti2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.12   1.6e+02     123     150 ..    1478    1505 ..    1463    1507 .. 0.92
   2 ?    7.5   0.0     0.002       2.6     100     156 ..    1497    1552 ..    1482    1568 .. 0.75
   3 ?   -0.8   0.0      0.69   8.8e+02     108     158 ..    1622    1672 ..    1609    1689 .. 0.74
   4 ?    0.5   0.0      0.29   3.7e+02     117     155 ..    1749    1787 ..    1735    1797 .. 0.79
   5 ?   -4.0   0.2       6.6   8.4e+03     179     213 ..    2051    2085 ..    2021    2099 .. 0.64
   6 ?    3.4   0.0     0.037        47     124     164 ..    2171    2221 ..    2128    2224 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.12
        Tti2  123 livPpiLnllDdtdtsvKlrGlklLqtl 150 
                   i P +Ln l+d++ + K  ++ lL  +
  KHJ32468.1 1478 QILPTLLNGLEDSQWRSKRGACDLLGAM 1505
                  699**********************875 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.002
        Tti2  100 kaisvlawiirqlqskeieanwplivPpiLnllDdtdtsvKlrGlklLqtllekles 156 
                   a+++l  +   l sk++ +n+p i+Pp+  +l+d++ +v+l + + L+++ e + +
  KHJ32468.1 1497 GACDLLGAMA-YLNSKQLAQNLPEIIPPLTCVLNDSHKEVRLAANRSLKRFGEAIVN 1552
                  4555555544.44555589*************************9999999777655 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.69
        Tti2  108 iirqlqskeieanwplivPpiLnllDdtdtsvKlrGlklLqtlleklessk 158 
                  + + +++k++ +++p++v+++     d+ ++ ++++ k L +l+ekl ++ 
  KHJ32468.1 1622 LAHLTERKDLISHLPILVSGLKIATVDPVPTTRATASKALGSLIEKLGEDA 1672
                  555566667888999999998888888889999999999999999998884 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.29
        Tti2  117 ieanwplivPpiLnllDdtdtsvKlrGlklLqtllekle 155 
                  + +++++i+P iL+ l d+ +s+++++l+  + l+++++
  KHJ32468.1 1749 FANYLSRIIPIILQGLADELESIRETSLRAGRLLVKNFS 1787
                  567899999999999999999999999887776666665 PP

  == domain 5  score: -4.0 bits;  conditional E-value: 6.6
        Tti2  179 yLPsltpeeeSlklLraaYpallsLaklefaeksk 213 
                   LPsl+p+  S ++ +    a+ sLa++  ++   
  KHJ32468.1 2051 ILPSLIPSLISSPISSFNARAIASLATVAGSAMTR 2085
                  57777777777777777777777777766654443 PP

  == domain 6  score: 3.4 bits;  conditional E-value: 0.037
        Tti2  124 ivPpiLnllDdtdtsvKlrGlklLqtlleklessk..........llkrtG 164 
                  i+  +L l Dd+dt v  ++ + L+++ ++l++++          +l++ G
  KHJ32468.1 2171 IIRTLLILFDDRDTDVSKTAWMALNEFTKRLKKEEmetlvlstrkVLQQVG 2221
                  67789***************************9988887666666666555 PP

>> CHAD  CHAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00019      0.25     104     222 ..    1997    2187 ..    1967    2191 .. 0.49

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00019
                  HHHHHHHHHHHHHTSHHHHHHHHHHHHHHT--S--........................................TSBHHHHHHHHHHHHHHHH.HH CS
        CHAD  104 erkrararvlaaLdsaryqalldaldallaaerle........................................aepaaaalekrlrkayrklekr 160 
                    ++a++ ++++L ++   ++l  l +ll+ + ++                                         +++a+++  +++++ ++++++
  KHJ32468.1 1997 TAAEAFDSLQQLLGKRAVDQVLPYLLNLLRSDVEAenalsalltlltettrssiilpslipslisspissfnaraIASLATVAGSAMTRKLQAIMNA 2093
                  3334444444444444444444444444422221122222333333333333344444444444444433333332222233333333333332222 PP

                  HH--.....................................------THHHHHHHHHHHHHHHHHHHHGGGS-H.HHHHHHHHHHHHHHHHHHHHHH CS
        CHAD  161 aaka.....................................eadesdeealHelRkaaKrlRYaaeafaplypa.alkallkalkklqevLGdlqDl 219 
                    +                                              ++ + Rk+aK +RY a +f++  ++ ++ ++ +++ +   +L d +D+
  KHJ32468.1 2094 LMDNiicckdteleieldasfltvimsvdefdglntsmsvlM----ALVKHQDHRKRAKTARYLAKFFEE--TTlDYSRFNQDIIRTLLILFDDRDT 2184
                  222234444444444444445555555555555556544431....45678899**************75..3347888877777777777777777 PP

                  HHH CS
        CHAD  220 vva 222 
                  +v+
  KHJ32468.1 2185 DVS 2187
                  776 PP

>> MMS19_C  RNAPII transcription regulator C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.34   4.4e+02     383     422 ..      19      57 ..      17     102 .. 0.68
   2 ?   -0.4   0.1      0.36   4.6e+02     172     248 ..     285     361 ..     176     377 .. 0.83
   3 ?    4.5   0.0     0.012        16     378     421 ..    1324    1367 ..    1316    1369 .. 0.91
   4 ?    3.2   0.0      0.03        38     360     422 ..    1505    1564 ..    1476    1565 .. 0.79
   5 ?   -0.9   0.1      0.55     7e+02     346     388 ..    1651    1689 ..    1632    1739 .. 0.64
   6 ?   -0.3   0.1      0.34   4.4e+02     369     396 ..    1750    1777 ..    1713    1794 .. 0.83
   7 ?    3.0   0.0     0.035        45     372     418 ..    1934    1981 ..    1932    1986 .. 0.90
   8 ?    2.3   4.4     0.056        72     328     403 ..    2012    2083 ..    2004    2100 .. 0.76
   9 ?   11.4   0.9   9.8e-05      0.13     323     416 ..    2229    2322 ..    2110    2329 .. 0.73
  10 ?    1.1   0.5      0.13   1.7e+02     188     269 ..    2354    2431 ..    2336    2458 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.34
     MMS19_C 383 LdlpdaevkastLetlksileespslvsehlssLvprLLk 422
                 L l++ ++++  L+tl++ l + +++ +e++ s+ + L k
  KHJ32468.1  19 LFLSSIKLRLEGLHTLEDCLSK-NEVKNEFVPSILKLLFK 57 
                 5555666666666666666663.56666666666666554 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.36
     MMS19_C 172 ilftailaalrkevklpdlsellnelle..llaseaespflrlaylrllallvNKflkdedlselldellesieeslie 248
                  l+t+++ +l++ ++l   + ll++ll+  l+  ++ +p++r+++l  +   + K+ + e  + +++++l+ +++ ++ 
  KHJ32468.1 285 DLSTSFIRSLPPFIDL--SNILLKHLLNplLSNAKSINPTTRDGALSTFQAAILKCHDIEIKKVIFEKILDPLQSGKTL 361
                 4899999999999999..88888999998877888999********999999989886688888877777777666655 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.012
     MMS19_C  378 lLlqaLdlpdaevkastLetlksileespslvsehlssLvprLL 421 
                   Ll  L++p+++v++++ e+l+++++ s + v+++++ +  rL 
  KHJ32468.1 1324 RLLATLSTPSEAVQYAVAECLSPLVRVSVDNVKDYVQNVLDRLF 1367
                  5999**********************99***********99995 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.03
     MMS19_C  360 lkhvPkslllpeLptLlPlLlqaLdlpdaevkastLetlksileespslvsehlssLvprLLk 422 
                   + + ++ l + Lp+++P L   L+ + +ev++++   lk   e   ++v++ ++sLv  LLk
  KHJ32468.1 1505 MAYLNSKQLAQNLPEIIPPLTCVLNDSHKEVRLAANRSLKRFGE---AIVNPEIKSLVDVLLK 1564
                  455667778999***********************999999988...7**************8 PP

  == domain 5  score: -0.9 bits;  conditional E-value: 0.55
     MMS19_C  346 setkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpda 388 
                  ++t++    AL +l+++    l    Lp+L+P L+q L+ ++ 
  KHJ32468.1 1651 PTTRATASKALGSLIEK----LGEDALPDLIPSLMQTLKSDTG 1689
                  44555555555555544....3445688888888888887765 PP

  == domain 6  score: -0.3 bits;  conditional E-value: 0.34
     MMS19_C  369 lpeLptLlPlLlqaLdlpdaevkastLe 396 
                   ++L+ ++P++lq+L+ + ++++  +L 
  KHJ32468.1 1750 ANYLSRIIPIILQGLADELESIRETSLR 1777
                  579************9988888888876 PP

  == domain 7  score: 3.0 bits;  conditional E-value: 0.035
     MMS19_C  372 LptLlPlLlqaLdlpdaevkastLetlksile.espslvsehlssLvp 418 
                  Lp+LlP+L ++L+ +da+ k+     l++++   s +++++h ++L++
  KHJ32468.1 1934 LPNLLPVLEEGLKSNDANSKQGICIALRELIGsASIEALDDHQNTLIT 1981
                  89****************999999999999995558999999999997 PP

  == domain 8  score: 2.3 bits;  conditional E-value: 0.056
     MMS19_C  328 rfFstvlpklvegfkssdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdaevkastLetlksile 403 
                  r  ++vlp+l++  +s  + + en L AL  ll+ + +s ++  Lp+L+P L+ +   + ++   ++L t++  ++
  KHJ32468.1 2012 RAVDQVLPYLLNLLRS--DVEAENALSALLTLLTETTRSSII--LPSLIPSLISSPISSFNARAIASLATVAGSAM 2083
                  8899**********99..9999*******9999999999888..89999999998544444456666777766666 PP

  == domain 9  score: 11.4 bits;  conditional E-value: 9.8e-05
     MMS19_C  323 lLykQrfFstvlpklvegfkssdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdaevkastLetlksileespslvsehlssL 416 
                       r  + +lp  + g  + + e++     A+s ++++++++ l p+ +++   L++  +  + ++k+++L tl+++l + p+l+++++ +L
  KHJ32468.1 2229 GFSVPRGINAILPIFLHGLMNGNLEQRIQSALAISDIVNKTSEDFLKPFVSQITGPLIRVVSERSIDLKSAALFTLNNLLGKIPTLLKPFMPQL 2322
                  55555666777777777777766666666778********************************************************999887 PP

  == domain 10  score: 1.1 bits;  conditional E-value: 0.13
     MMS19_C  188 pdlsellnellellaseaespflrlaylrllallvNKflkd.edlselldellesieeslieaedsqerkaaleiliwitKAL 269 
                  p ++ l+ el++    ++++   r+a++++l  +vNK  ++ +d+s +     ++i +s+ie++d ++  ++ ++l+  +K +
  KHJ32468.1 2354 PRVDPLIAELCT--GAKTSDLGVRIAIMKALYEVVNKAGTKiNDTSIA---SISNIIKSEIEDNDLSLAIINAKLLAAFSKVI 2431
                  778888888888..4556889999999999999999999777666665...44444444444566667777767666666655 PP

>> RIX1  rRNA processing/ribosome biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.2       9.1   1.2e+04      75     116 ..     130     173 ..     118     177 .. 0.76
   2 ?   -1.0   0.0      0.98   1.3e+03     141     175 ..    1144    1182 ..    1141    1187 .. 0.78
   3 ?   -1.1   0.1         1   1.3e+03     135     161 ..    2016    2044 ..    1986    2062 .. 0.81
   4 ?   12.9   0.2   5.2e-05     0.066     127     186 ..    2272    2335 ..    2266    2337 .. 0.93
   5 ?   -1.7   0.0       1.6   2.1e+03     133     169 ..    2516    2557 ..    2497    2558 .. 0.59

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 9.1
        RIX1  75 esg.eellssgstWlrallsiLekp.dppavlelaistlsrift 116
                 +++   l++  s+ l+  +  L +p  +  vl+++ +tl+rif+
  KHJ32468.1 130 SCWgLLLIEAISNALQLCIERLRRPnLKNRVLHITRRTLRRIFS 173
                 56667777778888888888888884458899999999999997 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.98
        RIX1  141 lqlleee....letvlealstllplhPttfRpfankirs 175 
                  l+ lee+       + +++++ +++hP tf  + +k++s
  KHJ32468.1 1144 LRFLEETdlklRRAAAKSIAEAVKNHPGTFLQVLEKLKS 1182
                  5555544666666788999***********999999886 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1
        RIX1  135 kfitallqlleee..letvlealstllpl 161 
                  ++++ ll+ll+++   e +l+al tll+ 
  KHJ32468.1 2016 QVLPYLLNLLRSDveAENALSALLTLLTE 2044
                  56777888888667777777777777764 PP

  == domain 4  score: 12.9 bits;  conditional E-value: 5.2e-05
        RIX1  127 Eiltpnlpkfitallqlleee....letvlealstllplhPttfRpfankirslllsllasses 186 
                  ++l p ++++  +l+++++e+     + +l +l++ll + Pt ++pf  +++   +++la+++s
  KHJ32468.1 2272 DFLKPFVSQITGPLIRVVSERsidlKSAALFTLNNLLGKIPTLLKPFMPQLQRTFTKCLADTSS 2335
                  5789999************88***999*********************************9986 PP

  == domain 5  score: -1.7 bits;  conditional E-value: 1.6
        RIX1  133 lpkfitallqlleee......letvlealstllplhPttfRpf 169 
                  l+ ++++l +ll+          + l +++t+ ++h +++Rp+
  KHJ32468.1 2516 LKLIFETLANLLR-PgnsadkRRLSLVVIRTVCRHHRNIIRPH 2557
                  4445555555555.33555556666666666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2671 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      621  (0.0346366); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 1.45u 0.33s 00:00:01.78 Elapsed: 00:00:00.54
# Mc/sec: 14779.82
//
Query:       KHJ32469.1  [L=517]
Description: putative serine hydroxymethyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   9.3e-192  637.0   0.0   1.1e-191  636.7   0.0    1.0  1  SHMT      Serine hydroxymethyltransferase


Domain annotation for each model (and alignments):
>> SHMT  Serine hydroxymethyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  636.7   0.0  6.1e-196  1.1e-191       1     398 [.      45     449 ..      45     450 .. 0.97

  Alignments for each domain:
  == domain 1  score: 636.7 bits;  conditional E-value: 6.1e-196
                 HHHHTHHHHHHHHHHHHHHHHSEE-STT-----HHHHHHHTSGGGG----EETTEESSST-HHHHHHHHHHHHHHHHHCT-STTTEEEE---SSHHHHH CS
        SHMT   1 leesdpevaeiikkekerqkeeieliasenftskavlealGsvltnkyaeGyPGkryyGGcefvdeveelaqdrakelfkldpakwgvnvqplsGsqan 99 
                 le+sdp ++ei+++ek+rqk+ i+li+senfts+avl+alGsv++nky+eGyPG+ryyGG+e++d++e+l+q+ra++ f+l+ ++wgvnvq+lsGs+an
  KHJ32469.1  45 LENSDPTIYEILQNEKNRQKHFINLIPSENFTSQAVLDALGSVMQNKYSEGYPGARYYGGNEYIDQAESLCQTRALQTFGLNDKEWGVNVQSLSGSPAN 143
                 6789*********************************************************************************************** PP

                 HHHHHHHT-TT-EEEEESCTTTSTGGGT-BTSS-B-SHHHHHSEEEEE-B-TTTSSB-HHHHHHHHHHH--SEEEEE-SST-S---HHHHHHHHHHTT- CS
        SHMT 100 lavytallepgdrilgldladGGhlthGakveskkisassklfesveykvdketglidydelekkakefkPklivaGtsaysrlidyarlreiadevga 198
                 l+ ++al+++g++i+gldl++GGhl+hG+++ +kkis++sk+f++++y++d +tglidy++le+ a +f+P++i+aGtsaysrlidy++++  a++vga
  KHJ32469.1 144 LYTFSALINVGGKIMGLDLPHGGHLSHGYQTPTKKISFISKYFDTLPYHLDLSTGLIDYEKLEEVALKFQPQIIIAGTSAYSRLIDYQKMKATAEKVGA 242
                 *************************************************************************************************** PP

                 EEEEE-GGGHHHHHTTSS--GCCTSSEEEEESSSTT-S-S-EEEEEC-SEEEEE.TTTEEEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHCTSH CS
        SHMT 199 yllvdmahiaGlvaagvipsPfeyadvvtttthktlrGprgglillrkgvksvd.ktgkevleelekkinsavfPglqGGPlnhviaakavalkealep 296
                 yll+dmahi+Glvaa+vipsPfe+advvtttthk+lrGprg++i++rkg+++v+  t ++   +le+ in++vfPg+qGGP+nh+i+a+avalk+a +p
  KHJ32469.1 243 YLLADMAHISGLVAAKVIPSPFEFADVVTTTTHKSLRGPRGAMIFFRKGLRKVNqSTQEKEIWNLEEPINFSVFPGHQGGPHNHTITALAVALKQAQSP 341
                 ******************************************************544445578************************************ PP

                 HHHHHHHHHHHHHHHHHHHHHH......TT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTSSTTTT-SEEEEESHHHHHTT--H CS
        SHMT 297 efkvyqkqvlknakalaealke......kgyklvsgGtdnhlvlvdlrekgldGkraekvlekvnitankntvPgdksalvtsGlrlGtpaltsrgfke 389
                 ef++yq+ vlknaka+++++ +       gy++vsgGtdnhlvlvdlr++++dG+r+e++le v +++nkntvPgd+sal +sGlr+Gtpa+t+rgf++
  KHJ32469.1 342 EFRAYQEAVLKNAKAFSQHFSKpkerggLGYTIVSGGTDNHLVLVDLRPQKIDGARVERILELVGVACNKNTVPGDRSALKPSGLRMGTPAMTTRGFGQ 440
                 *******************97643333358********************************************************************* PP

                 HHHHHHHHH CS
        SHMT 390 edlekvakf 398
                 ed+ +va++
  KHJ32469.1 441 EDFIRVADI 449
                 ******987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3613.69
//
Query:       KHJ32470.1  [L=304]
Description: putative cytochrome c1 heme lyase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-44  151.9  13.8    1.1e-39  136.9   4.6    2.9  2  Cyto_heme_lyase  Cytochrome c/c1 heme lyase


Domain annotation for each model (and alignments):
>> Cyto_heme_lyase  Cytochrome c/c1 heme lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   1.7   7.6e-08    0.0014      19     117 ..      23     131 ..       2     134 .. 0.63
   2 !  136.9   4.6   5.9e-44   1.1e-39     115     289 ..     155     297 ..     145     300 .. 0.90

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 7.6e-08
  Cyto_heme_lyase  19 asskasspseCPmhkkkkskkkkaaseaaakekkkesasacpvkeee......................eseeeeeksalsklnplnympsels 90 
                       +s+a+++++ P+  + k++++k+  ++  +  ++           +                           ee+  +s+ n  n+  +++ 
       KHJ32470.1  23 LESRATNKPSLPLVDSLKDVTSKSLDKQCDSY-TT-----------TlsntvkmaqatslrslweslttWPPPPEERGINSERNNYNHTINHIQ 104
                      34555566666655443333333332222111.11...........0222222222345667778887766677788899************** PP

  Cyto_heme_lyase  91 qerapeqkvdLpteReissiPkgdeeg 117
                        + +  k++L ++Reis+iP++++++
       KHJ32470.1 105 GPERKATKISLGVDREISTIPRTQSQK 131
                      **********************98875 PP

  == domain 2  score: 136.9 bits;  conditional E-value: 5.9e-44
  Cyto_heme_lyase 115 eeglWeYPspqqmynAmlrKGyedipedavesmvavHnflnEgaWeeileWEkkfakglakgwkkckrgeekveeelekeeePkLlrFqGrpke 208
                       eg+W YPs++++++Am rKGy+  +  +++ +v +Hn++nE+aW+ei +WEk + +             ek+       + PkL  F+G p+ 
       KHJ32470.1 155 PEGNWIYPSEKMFFDAMRRKGYSS-EVRDMKTIVPIHNAVNEQAWKEIKQWEKPWLN-------------EKC-------DGPKLHSFKGLPSS 227
                      578*******************65.56789*************************99.............333.......48************ PP

  Cyto_heme_lyase 209 lsPkarllqllgklfPskfstelPFDRHDWlvlRkteeeekkevrYviDyYsgpdeet..GepvfllDvRPaldsltaaadRl 289
                      ++Pkarl ++lg+        + PFDRHDWlv+R+      k+v YviD+Y g d+++  G+  f+lDvRP l++l+  + R 
       KHJ32470.1 228 MTPKARLNTWLGY--------TAPFDRHDWLVDRC-----GKRVEYVIDFYVGRDQQKgdGKLNFYLDVRPKLNTLEGWKMRA 297
                      ************9........789***********.....689***********8887447899**********998877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2359.06
//
Query:       KHJ32471.1  [L=1489]
Description: putative helicase associated domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-14   54.5   0.0    5.2e-14   52.5   0.0    2.1  1  Helicase_C   Helicase conserved C-terminal domain
    1.6e-13   50.8   0.0    4.5e-13   49.4   0.0    1.8  1  HA2          Helicase associated domain (HA2)
    8.7e-12   45.2   0.1    2.5e-11   43.6   0.1    1.9  1  DEAD         DEAD/DEAH box helicase
    2.7e-07   31.0   1.1    6.9e-07   29.6   0.1    2.2  2  AAA_22       AAA domain
    2.6e-06   27.7   0.0    7.4e-06   26.2   0.0    1.8  1  OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fol
     0.0028   18.2   0.0      0.018   15.5   0.0    2.4  2  ABC_tran     ABC transporter
     0.0077   15.6   0.0      0.016   14.5   0.0    1.5  1  ATPase       KaiC
  ------ inclusion threshold ------
      0.013   15.4   0.0      0.036   14.0   0.0    1.7  1  RsgA_GTPase  RsgA GTPase
      0.026   14.4   2.3      0.037   14.0   0.1    2.4  2  Rad17        Rad17 P-loop domain
      0.044   13.8   0.4       0.13   12.3   0.0    2.0  2  UPF0172      Uncharacterised protein family (UPF0172)
       0.05   13.3   0.0       0.19   11.5   0.0    1.9  2  AAA_29       P-loop containing region of AAA domain
      0.059   13.1   0.1        2.3    7.9   0.0    3.0  3  IstB_IS21    IstB-like ATP binding protein
      0.071   13.0   0.0       0.18   11.7   0.0    1.7  1  NACHT        NACHT domain


Domain annotation for each model (and alignments):
>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.5   0.0   3.8e-17   5.2e-14      10     110 ..     966    1092 ..     956    1093 .. 0.86

  Alignments for each domain:
  == domain 1  score: 52.5 bits;  conditional E-value: 3.8e-17
                  H...HHTTTTSEEEEEESSHHHHHH.HHHHHHHT.....TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSH CS
  Helicase_C   10 l...kleeeggkilifvntidrlek.vklllekk.....gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnv 97  
                       le+  + il+f++ i ++ +  ++l  ++     +  + +lh++l ++++e ++    +g++++++at++ae+Gi+ip++++Vi+ +  r++
  KHJ32471.1  966 AtndRLEAFSKAILVFLPGIGEIRQlNDML-GSHpfflsNWYIYALHSTLANEDQESAFLLPPSGTRKIILATNIAETGITIPDITCVIDTGKHREM 1061
                  245567888999*********887653444.22235666899****************************************************999 PP

                  ..................HHHHHHHTTSSST CS
  Helicase_C   98 ..................tsyiqriGRtgRa 110 
                                    ++++qr+GR+gR+
  KHJ32471.1 1062 rfderrqfsrlletfvskANAKQRRGRAGRV 1092
                  999999************************7 PP

>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4   0.0   3.2e-16   4.5e-13       1      75 [.    1157    1229 ..    1157    1283 .. 0.81

  Alignments for each domain:
  == domain 1  score: 49.4 bits;  conditional E-value: 3.2e-16
         HA2    1 AlelLvalgALdeegnlTelGrkmaelPlsprlakmLlaaaeleegcldevitivAalsveeifleeneeekeee 75  
                  A+  L+++ AL++ ++lT+lG ++a+lPl++ l+k+ l+++ +  +cld  iti+A+ls +++f  +  ++++ +
  KHJ32471.1 1157 AIDALIDVRALTTGEDLTPLGIQLARLPLDVFLGKLVLFGSVF--KCLDASITIAAILSSKSPFSAPFGSRSQAD 1229
                  678899**********************************776..*******************99887665544 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.6   0.1   1.8e-14   2.5e-11       5     171 ..     704     863 ..     700     868 .. 0.79

  Alignments for each domain:
  == domain 1  score: 43.6 bits;  conditional E-value: 1.8e-14
                 HHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTST..SEEEEEETTSSHHHHHHHHHTTCSEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   5 aeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyid..lrvlliiggvaardqlskldngvdiv 101
                 ++++ +i +++ v++++eTG GK++     +l++ ++ k  +  k+ + eP r  a   ++++++ + +++  + ++  + g a r + +   n++ +v
  KHJ32471.1 704 EKVLSTIEREQTVIICGETGCGKSTQVPSFILEHQLS-K-GKPCKIYVTEPRRLSAISLARRVSEELGEARgdCGTNRSLVGYAIRLESNIS-NETCLV 799
                 6788999999**************9999999988876.4.445599999****888888888876666533235555455577886665555.99**** PP

                 EEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS.H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.x RF
        DEAD 102 vgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp.k 171
                 ++t+g ++++l++ + +l++++ ++lDE+++   +  sdf+  +l++l +  +d k    vi++SAT+  +
  KHJ32471.1 800 YATTGIVMRMLENSN-DLKNITHIILDEVHERTID--SDFLLIVLKKLLTRRTDLK----VILMSATVDaE 863
                 ***********7555.7*************99987..999*999****55555544....*******9844 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       3.7   5.1e+03      59      79 ..      86     105 ..      55     160 .. 0.55
   2 !   29.6   0.1     5e-10   6.9e-07       4     129 ..     712     857 ..     709     864 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 3.7
      AAA_22  59 ellralglelkaerlsseell 79 
                 +l++++ ++ k+ + +++ l+
  KHJ32471.1  86 MLVEKYAEKSKK-EVKRQILR 105
                 333333322222.22222222 PP

  == domain 2  score: 29.6 bits;  conditional E-value: 5e-10
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka...............erlsseellealeqalr 87 
                 +++ ++++Ge+G+GK+t +  +  +++      + +p  ++vt p   s  +l+r++ ++lg+ + +               ++ s+e +l + +  + 
  KHJ32471.1 712 REQTVIICGETGCGKSTQVPSFILEHQLS----KGKPCKIYVTEPRRLSAISLARRVSEELGEARGDcgtnrslvgyairleSNISNETCLVYATTGIV 806
                 567899*******************9543....3499999**********************98888**************966666666666666666 PP

      AAA_22  88 arav........ielliiDEaqhlr..seealeeLrsllnlsrkgvqliLvG 129
                  r+         i  +i+DE++  +  s+ +l  L++ll  +r+++++iL+ 
  KHJ32471.1 807 MRMLensndlknITHIILDEVHERTidSDFLLIVLKKLLT-RRTDLKVILMS 857
                 6666666667779**********54467999999977777.7*******985 PP

>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   5.4e-09   7.4e-06       4      81 ..    1339    1412 ..    1337    1414 .. 0.88

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 5.4e-09
                   HHHHHHTTCEEEEEETTCCEEETTTCEEEEE-TTSTTTTT...TSSSEEEEEEEEESSSEE.EEEEEEE-HHHHHHHST CS
  OB_NTP_bind    4 illaGlypqiarkdpskkdyktartktrvfihpsSvlaknekekepewvvytelvettkly.lrdltaidpawLllfag 81  
                   i+++++yp++  +   +k+y+   +++ ++ihpsSv++      + +w+ y+  ++++  y ++++t  +  +++l++g
   KHJ32471.1 1339 IITWSFYPRLLVQ--DGKGYRNCANNKTISIHPSSVNKG---RNDIKWLSYYHVMQAKQFYnAHETTIAEQFSIALLCG 1412
                   899********55..5556888889*************8...599**************98899999999999999987 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.3e-05     0.018       6      41 ..     708     743 ..     704     766 .. 0.87
   2 ?   -2.0   0.0       3.5   4.8e+03      91     129 ..    1447    1485 ..    1377    1486 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.3e-05
                 EEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   6 lklkegekvaivGenGaGKStLlkllagllkpteGe 41 
                  ++++ ++v i Ge+G+GKSt +  ++ +++  +G+
  KHJ32471.1 708 STIEREQTVIICGETGCGKSTQVPSFILEHQLSKGK 743
                 58999****************998888888777775 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 3.5
                  HSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   91 klglkelkdtvvksspssLSgGqkqrvalarallkkpkl 129 
                  +++l e+ ++  k+ ++ LS  q++ +++ + +++++++
  KHJ32471.1 1447 RYRLREILNKSFKNPGKPLSAQQQKWMEIWQKIFTQRSM 1485
                  345667888999888899999999999999999888765 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   1.2e-05     0.016      15      55 ..     709     750 ..     699     828 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.2e-05
      ATPase  15 GipegrvvlitGepGtGKtifalqFlikgaekygepg.vfvt 55 
                  i ++++v i+Ge+G+GK++ +  F+++   ++g+p+ ++vt
  KHJ32471.1 709 TIEREQTVIICGETGCGKSTQVPSFILEHQLSKGKPCkIYVT 750
                 57899**********************999999***977887 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   2.6e-05     0.036      56     120 ..     667     734 ..     659     744 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2.6e-05
                  GGG--HHHHHHHHHHHHHHTTSEEEE--TTTH...TTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHC CS
  RsgA_GTPase  56 iDlleeeeeleelkeelealgyevllvsaktk...egleelkellkd.ktsvlvGqSGvGKStLinall 120
                  +++++e++  + ++e+ ++ +y+++l s  +    e  e++ + ++  +t++++G++G GKSt + +++
   KHJ32471.1 667 LNVVKETH-QRLWHEKSSSHNYQTMLSSRMQLpmwEFKEKVLSTIEReQTVIICGETGCGKSTQVPSFI 734
                  56666666.8889999999999999988876534355667777777779**************876655 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.2       4.5   6.2e+03      72     119 ..      47     101 ..      38     113 .. 0.47
   2 ?   14.0   0.1   2.7e-05     0.037      43     174 ..     711     859 ..     671     866 .. 0.68

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 4.5
       Rad17  72 klrewlnpvslkepdnqksdfkgltekesrf.........lsqiesfkeleLkdaky 119
                 +++ ++np +  e+    ++++ +t  e  f         + ++e + e   k+ k 
  KHJ32471.1  47 NVNSNSNPNLRPETVETPEEVRNVTAEE--FeksleeselQMLVEKYAEKSKKEVKR 101
                 5566666655444444444444433221..111122222266666666665555555 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 2.7e-05
       Rad17  43 rkkriLLisGPsGCgkstvv......kvLsk.....elgiklrewlnpvslkepdnqksdfkgltekesrf.......lsqiesfkeleLkdakylklq 123
                 ++++ ++i+G +GCgkst v      + Lsk     +++++ r  +   + +  + +  + +g++ ++ ++        s i   +  ++ ++   +++
  KHJ32471.1 711 EREQTVIICGETGCGKSTQVpsfileHQLSKgkpckIYVTEPRRLSAISLARRVSEELGEARGDCGTNRSLvgyairlESNISN-ETCLVYATTGIVMR 808
                 234799************994433334566511111333334444444444677778899999999999988887664444443.33446777788888 PP

       Rad17 124 klGd.dlrtdkklilvedlPnkfyrdsdalrevirkylrssealplilvite 174
                 +l + +   +   i+++++ ++  +dsd l  v++k l+ +  l +il+ + 
  KHJ32471.1 809 MLENsNDLKNITHIILDEVHER-TIDSDFLLIVLKKLLTRRTDLKVILMSAT 859
                 8764133456667888999765.78999999999999999999988877554 PP

>> UPF0172  Uncharacterised protein family (UPF0172)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2       4.7   6.5e+03      85     121 ..      78     114 ..      74     171 .. 0.52
   2 ?   12.3   0.0   9.2e-05      0.13      88     188 ..     813     924 ..     806     926 .. 0.69

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4.7
     UPF0172  85 rlsdtelsslaekiadkiaenfsdavllvvdnkkles 121
                 +l+++el+ l ek a+k ++++++++l +   +++  
  KHJ32471.1  78 SLEESELQMLVEKYAEKSKKEVKRQILRLETDQRILR 114
                 5667777777777788777777766666644444422 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 9.2e-05
     UPF0172  88 dtelsslaekiadkiaenfsdavllvvdnkklesesee.e.allalykkdslgkwkkkkesseakekka.............salealsnlldkkkyek 171
                 +++l+++++ i+d+++e++ d+ +l++  kkl ++ ++ +  l++++ +   ++++k  + +   +                +a+e +  +ld++k+e+
  KHJ32471.1 813 SNDLKNITHIILDEVHERTIDSDFLLIVLKKLLTRRTDlKvILMSATVDA--ERFSKYLDGAPVLN--VpgrtfpvqvkyleDAVELTGYSLDNGKQEN 907
                 788999***********998766666566666554444243222333222..45554333332222..123478999999999**************** PP

     UPF0172 172 lvDFddHLddvsldwln 188
                 ++D+d++Ld +  + +n
  KHJ32471.1 908 FADLDEYLDIPDSNVTN 924
                 *********88877665 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00014      0.19       3      38 ..     694     729 ..     693     734 .. 0.82
   2 ?   -3.4   0.0       6.3   8.7e+03       6      27 ..    1002    1024 ..    1002    1030 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00014
      AAA_29   3 rlqlvNWgtfdghtieidlkgatlltGpsGsGKSTl 38 
                 r+ql  W   ++   +i++++++++ G++G GKST 
  KHJ32471.1 694 RMQLPMWEFKEKVLSTIEREQTVIICGETGCGKSTQ 729
                 6788888766667788888889*************5 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 6.3
      AAA_29    6 lvNWgtfdghtieidlkg.atll 27  
                  l NW+ +  h+   ++++ + +l
  KHJ32471.1 1002 LSNWYIYALHSTLANEDQeSAFL 1024
                  579**999865544444334444 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0017       2.3      41      61 ..     707     727 ..     684     762 .. 0.91
   2 ?    0.6   0.1       0.3   4.1e+02     104     158 ..     814     869 ..     804     875 .. 0.82
   3 ?   -1.5   0.0       1.3   1.8e+03      45      72 ..    1017    1044 ..    1006    1049 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0017
   IstB_IS21  41 lsfiekkenivllGpsGvGKs 61 
                 ls ie+++ ++++G +G GKs
  KHJ32471.1 707 LSTIEREQTVIICGETGCGKS 727
                 6779****************9 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.3
   IstB_IS21 104 krllkvdllilDdlgllpldqaeael.lfeviekryerrsiiitsnlpfaewdevl 158
                 + l +++ +ilD++   ++d++     l +++ +r + + i++++ +  +++++ l
  KHJ32471.1 814 NDLKNITHIILDEVHERTIDSDFLLIvLKKLLTRRTDLKVILMSATVDAERFSKYL 869
                 56778899************998765155799999999999999999999998876 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.3
   IstB_IS21   45 ekkenivllGpsGvGKshlaialgveav 72  
                  e++e+  ll psG+ K  la+ ++  ++
  KHJ32471.1 1017 EDQESAFLLPPSGTRKIILATNIAETGI 1044
                  578889999*************999877 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00013      0.18       2      67 ..     715     777 ..     714     892 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00013
                 CEEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEETTTTTTS-...-HCHHHCCCCTS--S CS
       NACHT   2 lvilqGeaGsGKTtLlqklalawaegklpqgafklvFflslrelsrsgnarsladllfsqlpepaa 67 
                 +vi+ Ge G+GK+t + +++l+ + +k + +    +++ + r+ls ++ ar++ + l +   + + 
  KHJ32471.1 715 TVIICGETGCGKSTQVPSFILEHQLSKGKPC---KIYVTEPRRLSAISLARRVSEELGEARGDCGT 777
                 89*******************9999987775...59999999999998887776666555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       800  (0.0446204); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.93u 0.29s 00:00:01.22 Elapsed: 00:00:00.45
# Mc/sec: 9844.67
//
Query:       KHJ32472.1  [L=226]
Description: putative vacuolar-sorting protein snf7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-33  115.1  18.6    2.5e-33  115.1  18.6    2.0  2  Snf7            Snf7
    0.00028   20.8   4.7    0.00055   19.9   4.7    1.4  1  CCDC24          Coiled-coil domain-containing protein 24 fami
  ------ inclusion threshold ------
       0.75    9.3   6.0       0.69    9.4   5.0    1.5  1  Allexi_40kDa    Allexivirus 40kDa protein
        1.7    7.2   8.5       0.95    8.0   6.3    1.6  2  DUF3138         Protein of unknown function (DUF3138)
        3.1    7.3  19.5         12    5.4  19.1    2.0  1  DUF4795         Domain of unknown function (DUF4795)
        6.9    4.4   9.0        7.5    4.3   9.0    1.2  1  V_ATPase_I      V-type ATPase 116kDa subunit family


Domain annotation for each model (and alignments):
>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.1  18.6   8.5e-37   2.5e-33       2     168 ..      23     195 ..      22     200 .. 0.93
   2 ?    0.5   3.5      0.13     4e+02     135     154 ..     206     225 ..     198     226 .] 0.82

  Alignments for each domain:
  == domain 1  score: 115.1 bits;  conditional E-value: 8.5e-37
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
        Snf7   2 airsLrkaerkldkkqeslekkikkleaelkklakkgnkdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqgakamkamnkk 100
                 ai+ Lr + ++l+k++++l+++  + +  ++++++++nk +a+ +L++kk++e+ l+q+ +q a+leq+ ++ie ++ n e+l+am+ + +am++++ k
  KHJ32472.1  23 AILGLRSQLEMLQKRERHLQNQMDE-QDTIARKNATTNKTAAKSALRRKKQFEHSLEQTTAQVATLEQQIYSIEAANINRETLAAMERAGEAMQQIHGK 120
                 67889*******************9.999********************************************************************** PP

                 TCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTT-GGTTHHHHHHHHHHHHHHHHHCSH.........HHHHHHHTX CS
        Snf7 101 vdidkidklmdeiedqmekaeeisEalsrslddadeedEeeleaeLdaLeqelgdeell........desvklpev 168
                 ++idk+d++m+ +++q +  eei  a+ ++  +++ +dE+e+e+eL +Leqe +d+++l        d   klp +
  KHJ32472.1 121 LNIDKVDETMEKLREQHALGEEIAQAITSAP-IGEPIDEAEIEDELAELEQEQLDNKMLgtgtipvsDYVHKLPVA 195
                 ***************************8877.569**********************9888877777666666655 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.13
                 GGTTHHHHHHHHHHHHHHHH CS
        Snf7 135 deedEeeleaeLdaLeqelg 154
                 ++ +E++ e+eL +L++e++
  KHJ32472.1 206 AQTEEDDEEEELRKLQAEMA 225
                 5778999999*****99985 PP

>> CCDC24  Coiled-coil domain-containing protein 24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   4.7   1.9e-07   0.00055      67     171 ..      31     144 ..      20     148 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 1.9e-07
      CCDC24  67 lqsLqeka..aaegrdeeqllaqrsrrvldYvldaaaersareespssrPesassks.....taasaasgsssasalssasaelealkdkLNvsdiDeV 158
                 l++Lq+++   ++++de++++a+++++  + ++++a  r+++ e++++++  ++ ++        +a+ + ++  a + a ++++++ +kLN+ ++De 
  KHJ32472.1  31 LEMLQKRErhLQNQMDEQDTIARKNATTNKTAAKSALRRKKQFEHSLEQTTAQVATLeqqiySIEAANINRETLAAMERAGEAMQQIHGKLNIDKVDET 129
                 666654443389999********99999999999999999999999999999999887766655666666667788899******************** PP

      CCDC24 159 aehLre..lLeeEce 171
                 +e+Lre  +L eE++
  KHJ32472.1 130 MEKLREqhALGEEIA 144
                 *****7445777765 PP

>> Allexi_40kDa  Allexivirus 40kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   5.0   0.00023      0.69      60     140 ..      47     126 ..      27     155 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00023
  Allexi_40kDa  60 dvdsiinklnpvsllsqttlLselrdalrtltklldklksvekklelsaetasdskllkklesietsleelhakldelsss 140
                   + d i  k  +++ ++ ++ L + ++  + l+++  +++++e+++   +  + ++++l  +e   + ++++h kl+ + + 
    KHJ32472.1  47 EQDTIARKNATTNKTAAKSALRRKKQFEHSLEQTTAQVATLEQQIYSIEAANINRETLAAMERAGEAMQQIHGKLN-IDKV 126
                   5677888888999999******************************999999********************9983.3322 PP

>> DUF3138  Protein of unknown function (DUF3138)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   6.3   0.00032      0.95      22     101 ..      19      95 ..       8     111 .. 0.75
   2 ?    1.3   0.8     0.033        99      34     109 ..      77     152 ..      69     178 .. 0.55

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00032
     DUF3138  22 atadrikalkaqltalqrqvkelraalaaakaaaGgkissqkaaaaaaaaaeaaaalteddvaqlkeqianaelkvdalq 101
                 a  + i  l++ql+ lq++ ++l++ +  + + a  ++++ k+aa +a   +    + e  ++q   q+a  e ++ +++
  KHJ32472.1  19 APKNAILGLRSQLEMLQKRERHLQNQMDEQDTIARKNATTNKTAAKSAL--RRKKQF-EHSLEQTTAQVATLEQQIYSIE 95 
                 44688999****************************9999999998877..333444.3455666666666665555554 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.033
     DUF3138  34 ltalqrqvkelraalaaakaaaGgkissqkaaaaaaaa.aeaaaalteddvaqlkeqianaelkvdalqeaattGpi 109
                 l++  +qv+ l++ + + +aa      +  a   a++a  +    l  d+v +  e++ +++   +++ +a t+ pi
  KHJ32472.1  77 LEQTTAQVATLEQQIYSIEAANIN-RETLAAMERAGEAmQQIHGKLNIDKVDETMEKLREQHALGEEIAQAITSAPI 152
                 444445555555555554444333.2222222233333123344455566666556655555555555555555555 PP

>> DUF4795  Domain of unknown function (DUF4795)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  19.1    0.0041        12      15     129 ..      55     180 ..      21     225 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0041
     DUF4795  15 aieklqeelekleekvkelekrledkekklealkkqieelekvkadkeeveeelaekadkeaLatkvsrdqfDeakkeLekml...eellekle..... 105
                 + +  ++  ++   ++k+ e++le++  ++ +l++qi   e ++ ++e+++  ++     +++  k + d++De++++L+++    ee+ + ++     
  KHJ32472.1  55 NATTNKTAAKSALRRKKQFEHSLEQTTAQVATLEQQIYSIEAANINRETLAAMERAGEAMQQIHGKLNIDKVDETMEKLREQHalgEEIAQAITsapig 153
                 4444455566677899*****************************************************************999998888888888888 PP

     DUF4795 106 ..eqeealkkaldtLq.eelkekldrl 129
                     e++++  l +L+ e+l++k+   
  KHJ32472.1 154 epIDEAEIEDELAELEqEQLDNKMLGT 180
                 887777777777777766777777544 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   9.0    0.0025       7.5      33     129 ..      32     121 ..      23     221 .. 0.60

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0025
  V_ATPase_I  33 demerklrfleeeieklekavikeeeaeesleapeekeldeleeelekleeelkelnenleklkkelnelvelkavlekakefleee.eeeeeeeese 129
                 + ++++ r l++++++++++ +k+ +++++ +++  ++ ++ e++le++++++ +l+++  ++++         ++ +++ + +e++ e++++ + + 
  KHJ32472.1  32 EMLQKRERHLQNQMDEQDTIARKNATTNKTAAKSALRRKKQFEHSLEQTTAQVATLEQQIYSIEA--------ANINRETLAAMERAgEAMQQIHGKL 121
                 34445555566666665555555555555555555555555555555555555555555555544........4444444444433321111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2338  (0.130403); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.30s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 1533.28
//
Query:       KHJ32473.1  [L=1184]
Description: putative forkhead domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-23   81.2   0.1    1.4e-22   79.8   0.1    1.8  1  Forkhead  Forkhead domain
    1.6e-06   28.4   0.2    1.9e-05   24.9   0.0    2.9  3  FHA       FHA domain
     0.0022   18.2   0.1      0.015   15.5   0.0    2.5  2  FHA_2     FHA domain
  ------ inclusion threshold ------
       0.51   10.5   3.7          5    7.3   0.1    2.7  3  DUF2294   Uncharacterized conserved protein (DUF2294)


Domain annotation for each model (and alignments):
>> Forkhead  Forkhead domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.1   3.1e-26   1.4e-22       2      80 ..     709     785 ..     708     792 .. 0.93

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 3.1e-26
                 -----HHHHHHHHHHT-TTT-B-HHHHHHHHHCC-HHHHC.C.-CCHHHHHHHHHHHHC--EEETT.-TTSS--EEE--T CS
    Forkhead   2 kPpysYaaLIaqAiksspekkltLseIyefieenfpyyrt.aakkgWqnSirhnLslnkcFekvpreeeegkgslwtidp 80 
                 kP+ +Y++LI +A++++p+++l L +Iy+ i +++py+r  +++ gWq+S+rhnLs++++F+kv++   +gkg+ w i +
  KHJ32473.1 709 KPQANYVTLIHEALSNAPTQQLGLPDIYRAIYRKYPYFRFkTQTLGWQSSVRHNLSQHHAFRKVEK---DGKGWTWGIVD 785
                 9*************************************9865688********************8...49*****9976 PP

>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.87   3.9e+03      29      62 ..      27      59 ..      22      60 .. 0.76
   2 !   24.9   0.0   4.2e-09   1.9e-05      15      69 .]     358     411 ..     338     411 .. 0.90
   3 ?   -2.8   0.1       1.8   8.3e+03      18      38 ..     763     785 ..     759     789 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.87
                TTCEEEEEEEESSSSSEEETT.EEESTTSEEEE-T CS
         FHA 29 kgsgkvyleDlgSknGtfvNg.qrigkgepveLks 62
                ++  ++++ + gS+   fvN  ++ +++ p+ L+s
  KHJ32473.1 27 DT--EFTISNEGSTLPFFVNTeSKTQNKLPANLQS 59
                44..89999999*******9966666677777776 PP

  == domain 2  score: 24.9 bits;  conditional E-value: 4.2e-09
                 STTSTTTEEEEEEETTCEEEEEEEESSSSSEEETTEEESTTSEEEE-TTEEEEET CS
         FHA  15 dpsiSrkHalikfdkgsgkvyleDlgSknGtfvNgqrigkgepveLksgdvielG 69 
                  +siSr H  i f++ +  ++ + +g +nG+fv +q  +++e v+Lksgd +++G
  KHJ32473.1 358 YKSISREHVKIAFNSRKCYFEAHVIG-RNGCFVQDQWYHTNEVVPLKSGDFLQVG 411
                 699*************9999999998.***********************99987 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1.8
                 STTTEEE..EEEETTCEEEEEEE CS
         FHA  18 iSrkHal..ikfdkgsgkvyleD 38 
                 +S +Ha   ++ d++ ++++++D
  KHJ32473.1 763 LSQHHAFrkVEKDGKGWTWGIVD 785
                 68999984444455589999988 PP

>> FHA_2  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   3.4e-06     0.015      34      85 ..     359     410 ..     354     419 .. 0.94
   2 ?   -2.3   0.1       1.2   5.4e+03      28      58 ..     561     591 ..     556     600 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 3.4e-06
       FHA_2  34 kkcSrnqvelkadlekklvkvkqlGanpssvngkklkknesvelkegqtlel 85 
                 k++Sr++v++  + +k++ + + +G+n + v+ +  + ne v lk+g+ l++
  KHJ32473.1 359 KSISREHVKIAFNSRKCYFEAHVIGRNGCFVQDQWYHTNEVVPLKSGDFLQV 410
                 578*********************************************9987 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.2
       FHA_2  28 etkikdkkcSrnqvelkadlekklvkvkqlG 58 
                 + +i ++++ ++ +e   d +kk++k+k l 
  KHJ32473.1 561 DDQIFNEALNKEDIENIRDKAKKKIKIKGLD 591
                 5678888999999999999999999999875 PP

>> DUF2294  Uncharacterized conserved protein (DUF2294)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.3     0.019        87      42      96 ..     546     596 ..     545     602 .. 0.64
   2 ?    7.3   0.1    0.0011         5      43     110 ..    1011    1078 ..    1007    1079 .. 0.82
   3 ?   -3.1   0.0       1.9   8.6e+03      73     108 ..    1101    1136 ..    1099    1137 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.019
     DUF2294  42 egvlTpaEkfLaetkeGrelvkqvRteLveeikpelkelieeitgvkvisllsDi 96 
                 +g+l++ E++L+++k+ +   +++ +e +e+i+++ k+     +++k ++l +D 
  KHJ32473.1 546 NGILSKREQKLLQKKDDQIFNEALNKEDIENIRDKAKKK----IKIKGLDLETDS 596
                 699*************65555555555555555555555....455555555555 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0011
     DUF2294   43 gvlTpaEkfLaetkeGrelvkqvRteLveeikpelkelieeitgvkvi..sllsDistetgervivfvld 110 
                   ++Tp+  +L e     + +++++++L e++k++  ++i +    +v+  s+  Dis +  e++iv++l 
  KHJ32473.1 1011 TSVTPSNVQLNEDVI--RAAEAFKKNLLESLKSKQSQMIVNSAVNRVLgiSSPNDISSNPQEEMIVATLR 1078
                  567777777766655..899*******************999999997225566*************996 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 1.9
     DUF2294   73 ikpelkelieeitgvkvisllsDistetgervivfv 108 
                  i ++l+++i++  +  v++  s+ ++  +   iv+v
  KHJ32473.1 1101 INTQLPDVIHSSHQSSVQNAQSNNKLIDNDGSIVAV 1136
                  678999999999999999999999999888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1072  (0.0597914); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.78u 0.26s 00:00:01.04 Elapsed: 00:00:00.44
# Mc/sec: 8146.89
//
Query:       KHJ32474.1  [L=469]
Description: putative duf647 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-88  296.1   2.1    7.7e-88  294.2   2.1    1.8  1  DUF647    Vitamin B6 photo-protection and homoeostasis


Domain annotation for each model (and alignments):
>> DUF647  Vitamin B6 photo-protection and homoeostasis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.2   2.1   4.3e-92   7.7e-88       7     239 ..      50     270 ..      45     272 .. 0.98

  Alignments for each domain:
  == domain 1  score: 294.2 bits;  conditional E-value: 4.3e-92
      DUF647   7 laqrvldvfLPagYPdsVtedYleYqiydslqafassiasvlatqavLegvGVGdasasptaAlllwvlkDglgrlatilfasrlgtaldsecKryrlv 105
                 ++++v ++fLP g+P sVt+dYl            ssia+++a++avLeg+GVGd+s spt+Alll+vl++++grlatilfa+rlgt +++e+K+yrl+
  KHJ32474.1  50 YVRKVIEAFLPVGFPGSVTSDYL------------SSIAGMIASRAVLEGIGVGDSSVSPTSALLLSVLQESIGRLATILFAHRLGTCIEPEIKMYRLA 136
                 7899******************7............8*************************************************************** PP

      DUF647 106 advlndlamllellspalp.slfllvlslasvlkslcgvaagatkaslsahfArkgnlgevnAKdssqetvvsllGlllgivvvslisskaaltwllli 203
                 ad++nd a ++++lsp++p  ++l   +l+svl+s+cgvaag++kaslsahfA++gnlge+nAKdssqetv+sllG+l+g++++ +iss++  tw++l+
  KHJ32474.1 137 ADIFNDSALIVDCLSPIFPrLWRLSFWCLSSVLRSMCGVAAGSSKASLSAHFATQGNLGELNAKDSSQETVISLLGMLFGSLLLPYISSQKM-TWIWLV 234
                 *******************999*********************************************************************9.9***** PP

      DUF647 204 lllalhllanykavravklrtLNrqRanivlsefle 239
                 lll++hl +ny avr+++lrt+NrqR+ni +se +e
  KHJ32474.1 235 LLLLVHLGTNYLAVRSICLRTFNRQRTNIFFSEVIE 270
                 ********************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       677  (0.0377601); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3345.24
//
Query:       KHJ32475.1  [L=802]
Description: putative intermembrane space aaa protease iap-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.5e-60  201.9   0.5    1.6e-59  201.0   0.5    1.4  1  Peptidase_M41  Peptidase family M41
    3.1e-42  144.1   0.0    6.7e-42  143.0   0.0    1.6  1  AAA            ATPase family associated with various cellular
    1.6e-09   37.4   0.0    3.1e-09   36.5   0.0    1.5  1  AAA_lid_3      AAA+ lid domain
    1.1e-06   29.2   0.5    0.00054   20.4   0.1    3.5  2  AAA_16         AAA ATPase domain
    3.5e-05   23.2   0.0    5.8e-05   22.5   0.0    1.3  1  TIP49          TIP49 P-loop domain
    7.1e-05   22.8   0.0    0.00023   21.2   0.0    1.9  1  AAA_5          AAA domain (dynein-related subfamily)
     0.0003   20.6   0.0     0.0021   17.8   0.0    2.2  2  RuvB_N         Holliday junction DNA helicase RuvB P-loop dom
    0.00058   20.1   0.0      0.053   13.8   0.0    2.9  2  AAA_22         AAA domain
     0.0011   18.7   0.1       0.65    9.7   0.0    2.4  2  AAA_24         AAA domain
     0.0022   17.6   1.3          1    8.9   0.3    3.0  3  AAA_25         AAA domain
     0.0061   16.7   0.0      0.016   15.4   0.0    1.8  1  AAA_33         AAA domain
  ------ inclusion threshold ------
      0.011   15.4   0.1      0.031   14.0   0.1    1.7  1  IstB_IS21      IstB-like ATP binding protein
      0.018   14.2   0.0      0.089   11.9   0.0    2.0  2  DUF815         Protein of unknown function (DUF815)
      0.018   14.4   0.3       0.04   13.3   0.3    1.5  1  Mg_chelatase   Magnesium chelatase, subunit ChlI
       0.04   14.4   0.6        4.7    7.7   0.4    2.7  2  ABC_tran       ABC transporter
      0.049   13.9   0.0       0.14   12.4   0.0    1.8  1  AAA_28         AAA domain
      0.051   13.7   0.0       0.14   12.3   0.0    1.7  1  AAA_2          AAA domain (Cdc48 subfamily)
      0.063   13.3   0.0       0.27   11.2   0.0    2.1  2  TsaE           Threonylcarbamoyl adenosine biosynthesis prote
      0.086   12.1   0.0       0.14   11.4   0.0    1.2  1  Lipase         Lipase
       0.11   13.0   0.0       0.26   11.8   0.0    1.7  1  AAA_18         AAA domain
       0.14   11.6   0.5       0.34   10.3   0.5    1.6  1  PhoH           PhoH-like protein
       0.15   11.6   0.0       0.69    9.4   0.0    2.0  1  AAA_7          P-loop containing dynein motor region
       0.32   10.3   1.5        4.8    6.4   0.5    2.5  2  Zeta_toxin     Zeta toxin


Domain annotation for each model (and alignments):
>> Peptidase_M41  Peptidase family M41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  201.0   0.5     2e-62   1.6e-59       2     188 ..     571     746 ..     570     749 .. 0.96

  Alignments for each domain:
  == domain 1  score: 201.0 bits;  conditional E-value: 2e-62
                    X--HHHHHHHHHHHHHHHHHHCCSSS-S-B--EES--TTS-----------TSS--BHHHHHHHHHHHHHHHHHHHHHHH..S-BGGGHHHHHHHH CS
  Peptidase_M41   2 visekekklvAyHEaGHalvglllkeadpveKvtiiPRgqalGltlslPeedklsltkeellarlavllGGraaEelifg..evttGasnDlekat 95 
                    +i +kek+l+AyHEaGHalv +++k+a+p++Kvti+PRg+alG+t++lPe+dk+s t ee++a+++v++GG++aEelifg  +vt+G+s+Dl++at
     KHJ32475.1 571 LIPQKEKELTAYHEAGHALVLMFTKGANPLHKVTIMPRGRALGVTFHLPEMDKYSKTVEEYRATIDVCMGGKVAEELIFGaeKVTSGCSSDLTQAT 666
                    6889******************************************************************************************** PP

                    HHHHHHHHTS---TTT-S--------..----.------SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEE-HHHH CS
  Peptidase_M41  96 kiarkmvtefGmsdklGpvsleeeeeeevflgkelkkekelseetaeeideevkelveeayerakeileekreelealaeaLlekEtldaeei 188
                    + a++mv++fGms+klG v l ++ e             +ls  t++ +++ev++ +e+ yerak++l ++++el+ la+aLl++E+l++ee 
     KHJ32475.1 667 QAAYSMVASFGMSEKLGHVDLASNYE-------------SLSAGTKQLVESEVRRTLEDGYERAKKLLISREKELHLLAKALLDYEMLNREEA 746
                    ********************887555.............589************************************************986 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.0   0.0   8.6e-45   6.7e-42       1     131 [.     360     489 ..     360     490 .. 0.97

  Alignments for each domain:
  == domain 1  score: 143.0 bits;  conditional E-value: 8.6e-45
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 vll+GppGtGKTlla+ava e+gv+f+ +sgse+ + yvg ++k++relf++ak+k+ p i+fiDE+da++++rs ++s+ +++++nqLlteldg++++
  KHJ32475.1 360 VLLIGPPGTGKTLLARAVAGEAGVPFFFMSGSEFDEIYVGVGAKRVRELFAAAKSKS-PAIVFIDELDAIGGKRSARDSNYAKQTLNQLLTELDGFDQN 457
                 79******************************************************9.****************************************7 PP

                 SSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA 100 eskvivigatnrpdkldpallr.gRfdrkieie 131
                  s vi++gatn p++ld+al r gRfdr + ++
  KHJ32475.1 458 -SGVIILGATNFPESLDKALTRpGRFDRNVVVD 489
                 .55*************************98775 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.5   0.0   3.9e-12   3.1e-09       1      44 [.     512     555 ..     512     556 .. 0.98

  Alignments for each domain:
  == domain 1  score: 36.5 bits;  conditional E-value: 3.9e-12
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgikeitmedfe 44 
                 dv+++ LA+ T+G+SGA+l+++++ Aa +A + +  +++m dfe
  KHJ32475.1 512 DVSIEVLAAGTPGFSGAELENIINQAAVRASKAKSSQVSMLDFE 555
                 8***************************************9997 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0      0.12        93      43     127 ..     136     233 ..     131     272 .. 0.61
   2 !   20.4   0.1   6.9e-07   0.00054      24     106 ..     355     429 ..     333     451 .. 0.57

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.12
      AAA_16  43 ellralekdggiflrgkcdql..esaipysalaqalareellrqlldeaesaeleawrekleeala.............avpelagaeasrllellkrl 126
                 +l+ +++++   fl++ + ++  +++   +++ qal+r  ll  + ++++s++++   +                     ++ l+++  +++++   ++
  KHJ32475.1 136 TLFGSASRSTLAFLEESANKFsdDANKQ-YVFYQALFRANLLPIIVERHQSKKFATNTACENLY-HqalgalnpssssmNQSRLTPQTGNSFNASQLQA 232
                 5666777777777888888884223334.3799***************8888888777733333.2444444455544444444444446665555554 PP

      AAA_16 127 l 127
                 +
  KHJ32475.1 233 V 233
                 4 PP

  == domain 2  score: 20.4 bits;  conditional E-value: 6.9e-07
      AAA_16  24 p..elvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleeala 106
                      vll+G++G+GK+ l+r+++ ++    ++f++g   +         +     + + +r+l ++a+s++++      ++a++
  KHJ32475.1 355 KlpKGVLLIGPPGTGKTLLARAVAGEAGVP-FFFMSGSEFDE--------IYVGVGA-KRVRELFAAAKSKSPAIVFIDELDAIG 429
                 14599*******************887777.67766666665........4444433.555555555454444444444444444 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   7.5e-08   5.8e-05      24      88 ..     319     393 ..     297     405 .. 0.71

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 7.5e-08
                 X.....XXXXXXXXXXXXXXXXXXXXX....XXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  24 e.....glvGqkkareaagvivelike....kklaG...ravLlaGpsgtGktalaiaiskelgedvpfvalsgsev 88 
                 +      + G  +a+e    +ve++k+      l+G   ++vLl Gp+gtGkt la a++ e g  vpf ++sgse+
  KHJ32475.1 319 QnvrfsDVHGCDEAKEELQELVEFLKNpekfSALGGklpKGVLLIGPPGTGKTLLARAVAGEAG--VPFFFMSGSEF 393
                 44455455667777777777777776532222355533379*********************98..*********95 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   2.9e-07   0.00023       1      76 [.     359     427 ..     359     434 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 2.9e-07
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEver 76 
                 +vlL+GppGtgK+ la+ +a   + +++ + ++++   +++  ++         +  +l  aa+  +++i+++DE++ 
  KHJ32475.1 359 GVLLIGPPGTGKTLLARAVAGEAGVPFFFMSGSEF---DEIYVGVGA------KRVRELFAAAKskSPAIVFIDELDA 427
                 59***************************999984...444444442......2334555566656889999999875 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   2.7e-06    0.0021      34      70 ..     358     394 ..     321     432 .. 0.72
   2 ?   -0.5   0.0       1.1   8.9e+02      34      60 ..     515     541 ..     487     553 .. 0.73

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 2.7e-06
      RuvB_N  34 dhvllyGpPGlGkttlakiiakelgvklkitsgPvle 70 
                   vll+GpPG Gkt la+ +a e gv +   sg   +
  KHJ32475.1 358 KGVLLIGPPGTGKTLLARAVAGEAGVPFFFMSGSEFD 394
                 569***********************99999987654 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.1
      RuvB_N  34 dhvllyGpPGlGkttlakiiakelgvk 60 
                   vl +G PG+  + l +ii +     
  KHJ32475.1 515 IEVLAAGTPGFSGAELENIINQAAVRA 541
                 468999***********9998765544 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   6.8e-05     0.053       8      29 ..     360     381 ..     357     396 .. 0.85
   2 ?    2.9   0.0      0.15   1.2e+02      88     131 ..     411     466 ..     399     472 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 6.8e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleql 29 
                 ++++G++GtGKT+l+r ++ ++
  KHJ32475.1 360 VLLIGPPGTGKTLLARAVAGEA 381
                 589*************998765 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.15
      AAA_22  88 arav..ielliiDEaqhlr...s.......eealeeLrsllnlsrkgvqliLvGtp 131
                 a++   ++++ iDE + +    s       ++ l++L + l+  +++  +i+ G +
  KHJ32475.1 411 AAKSksPAIVFIDELDAIGgkrSardsnyaKQTLNQLLTELDGFDQNSGVIILGAT 466
                 333345599*********88763555667777777774444445555666666655 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0071       5.5      48     119 ..     274     344 ..     253     348 .. 0.79
   2 !    9.7   0.0   0.00084      0.65       4      23 ..     359     381 ..     356     434 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0071
      AAA_24  48 swedfldevvelaaeladyktlviDtideleelclaevirqnekaeskedkgdgkGygelaeefrrllkklq 119
                 +w +fl  + ++      + tlviD+++ + + +   ++  +++++++  ++d+ G +e++ee+++l++ l+
  KHJ32475.1 274 KWFKFLAIFGFIIYFSLALVTLVIDSLQSI-KKVGGKTDSEAKAEQQNVRFSDVHGCDEAKEELQELVEFLK 344
                 56666666666655555677**********.779**********9999******************998776 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00084
      AAA_24   4 kiliyGpsgiGKTtlakel...g 23 
                  +l++Gp+g+GKT la+      
  KHJ32475.1 359 GVLLIGPPGTGKTLLARAVageA 381
                 589************99875442 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.4   1.9e+03     144     165 ..     293     314 ..     291     322 .. 0.71
   2 !    8.9   0.3    0.0013         1      30      54 ..     356     378 ..     337     398 .. 0.76
   3 ?    5.8   0.0     0.011         9     130     185 ..     405     464 ..     399     468 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.4
      AAA_25 144 rlvviDplsralggdensnsdv 165
                 + +viD+l+++   + + +s++
  KHJ32475.1 293 VTLVIDSLQSIKKVGGKTDSEA 314
                 579*******998855555554 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0013
      AAA_25  30 lpagelallaGapgtGKttlaldla 54 
                 lp+g  +ll+G+pgtGKt la  +a
  KHJ32475.1 356 LPKG--VLLIGPPGTGKTLLARAVA 378
                 5544..5899********9986554 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.011
      AAA_25 130 vdaleaaieevegvrlvviDplsralgg....densnsdv.galvealeriarrtgaavll 185
                 v++l aa+++ + ++ v iD l+++ g     d+n ++++ ++l++ l+ + ++ g+++l+
  KHJ32475.1 405 VRELFAAAKS-KSPAIVFIDELDAIGGKrsarDSNYAKQTlNQLLTELDGFDQNSGVIILG 464
                 7889999999.99***********9999887888888888899999999999998888875 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   2.1e-05     0.016       2      32 ..     360     392 ..     360     497 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2.1e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdt 32 
                 vll+G+pG+GK+ la+ ++ + g  +++ s  +
  KHJ32475.1 360 VLLIGPPGTGKTLLARAVAGEAGvpFFFMSGSE 392
                 799****************99998765555555 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   3.9e-05     0.031      49      71 ..     359     381 ..     355     392 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.9e-05
   IstB_IS21  49 nivllGpsGvGKshlaialgvea 71 
                 +++l+Gp+G+GK+ la a++ ea
  KHJ32475.1 359 GVLLIGPPGTGKTLLARAVAGEA 381
                 699***************98765 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00011     0.089      20      76 ..     316     380 ..     301     425 .. 0.84
   2 ?   -1.3   0.0       1.3     1e+03     188     215 ..     612     639 ..     608     653 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00011
      DUF815  20 eevdevklddLvgidkqkeal......venteqf..leglpannvLLwGarGtGKSslvkallne 76 
                 +e ++v+++d++g d+ ke+l      ++n e+f  l g+  + vLL+G  GtGK  l +a+  e
  KHJ32475.1 316 AEQQNVRFSDVHGCDEAKEELqelvefLKNPEKFsaLGGKLPKGVLLIGPPGTGKTLLARAVAGE 380
                 5678999***********988222222468888844459999******************99876 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.3
      DUF815 188 lwlgFykldqeeYleiveklakklglel 215
                 l ++F+ ++ ++Y + ve++ ++ ++ +
  KHJ32475.1 612 LGVTFHLPEMDKYSKTVEEYRATIDVCM 639
                 6799***************988776655 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.3   5.1e-05      0.04      25      43 ..     360     378 ..     348     382 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 5.1e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +ll+GppG+GKt+la++++
    KHJ32475.1 360 VLLIGPPGTGKTLLARAVA 378
                   89*************9875 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.4    0.0061       4.7      14      34 ..     360     380 ..     353     383 .. 0.90
   2 ?    3.5   0.0      0.12        93      79     117 ..     631     702 ..     575     704 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0061
                 EEEEESTTSSHHHHHHHHTTS CS
                 xxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllagl 34 
                 v ++G+ G+GK+ L++++ag+
  KHJ32475.1 360 VLLIGPPGTGKTLLARAVAGE 380
                 789**************9997 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.12
                 H................................HHHTCHHHHHHHSTTGGTTCBG.ESTTSGGS-HHHHHHH CS
                 x................................xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx RF
    ABC_tran  79 n................................esdeeiekalsklglkelkdtv.vksspssLSgGqkqrv 117
                                                  ++++ ++ +++++g++e+  +v + s+ +sLS G kq v
  KHJ32475.1 631 YratidvcmggkvaeelifgaekvtsgcssdltQATQAAYSMVASFGMSEKLGHVdLASNYESLSAGTKQLV 702
                 2444444444444444555555677777777767777799999999999965554155666*********98 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00018      0.14       2      26 ..     360     385 ..     359     413 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00018
      AAA_28   2 ivitGgestGKTtlleaLa.argypv 26 
                 + ++G+++tGKT l++a a + g+p 
  KHJ32475.1 360 VLLIGPPGTGKTLLARAVAgEAGVPF 385
                 689***************95458875 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00018      0.14       6      88 ..     360     437 ..     357     455 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00018
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-.HHHHTTSEEEEETGGG----.----- CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgy.vgaeegGivllDEidKihpk.essga 88 
                 +ll+gp g+Gkt+la+a+a    v    ++  +  se+ e   +   v    + + +   + +   iv++DE+d i  k +   +
  KHJ32475.1 360 VLLIGPPGTGKTLLARAVAGEAGV----PFFFMSGSEFDE---IYVGVGAKRVRELFAaAKSKSPAIVFIDELDAIGGKrSARDS 437
                 6899******************98....*********999...55555555554444404444556*********9997333333 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00035      0.27       3      45 ..     345     383 ..     331     391 .. 0.77
   2 ?   -2.8   0.0       7.8   6.1e+03      51      71 ..     668     687 ..     655     709 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00035
                 SHHHHHHHHHHHHHCHTEEEEEEESTTSSHHHHHHHHHHHTT- CS
        TsaE   3 seeetealgkklakalgdvilLeGdLGaGKTtlvrglakalgv 45 
                 ++e+  alg kl k     +lL G+ G+GKT l+r++a + gv
  KHJ32475.1 345 NPEKFSALGGKLPK----GVLLIGPPGTGKTLLARAVAGEAGV 383
                 44555555555555....6******************998877 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 7.8
                 TTTTSEEEEEE..SSEEEEE- CS
        TsaE  51 PTFtlveeYelekeglyHfDl 71 
                   +++v ++ + +e+l H+Dl
  KHJ32475.1 668 AAYSMVASFGM-SEKLGHVDL 687
                 57889999955.566999997 PP

>> Lipase  Lipase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00018      0.14     207     258 ..     666     719 ..     663     747 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00018
                 SSES-HHH-SSBESS--SSEEEEETTTTS-TTSSS-T--S-..--HHHHHTTTS CS
      Lipase 207 TdaaeipglglGisqkvghvDffpNGgseqPGckkvvlski..vdedGlwevtq 258
                 T+aa ++  ++G+s+k+ghvD   N  s   G k++v+s++  + edG   +++
  KHJ32475.1 666 TQAAYSMVASFGMSEKLGHVDLASNYESLSAGTKQLVESEVrrTLEDGYERAKK 719
                 77777899***************************9997652244566666555 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00034      0.26       1      24 [.     360     383 ..     360     477 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00034
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf 24 
                 +ll G+pG+GKt la++++ + g+
  KHJ32475.1 360 VLLIGPPGTGKTLLARAVAGEAGV 383
                 799**************9877654 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.5   0.00044      0.34      22      40 ..     360     378 ..     351     383 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00044
                 EEEE--TTSSTTHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavala 40 
                 v  iGp GtGKt+la a+a
  KHJ32475.1 360 VLLIGPPGTGKTLLARAVA 378
                 6789***********9998 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00089      0.69      34      56 ..     358     380 ..     354     448 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00089
       AAA_7  34 kpvllvGptGtGKtviikdllkk 56 
                 k vll+Gp GtGKt++++ +  +
  KHJ32475.1 358 KGVLLIGPPGTGKTLLARAVAGE 380
                 679************99886655 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.13     1e+02     127     178 ..     293     348 ..     288     353 .. 0.73
   2 ?    6.4   0.5    0.0061       4.8      14      39 ..     355     380 ..     347     383 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.13
  Zeta_toxin 127 vvvavkkelSrlgvldRyeeevae...g.Rlvpkeehdeafeglresvealeeekq 178
                 v +  ++ +S+++v      e+++   + R+ ++   dea e+l+e ve l++  +
  KHJ32475.1 293 VTLVIDSLQSIKKVGGKTDSEAKAeqqNvRFSDVHGCDEAKEELQELVEFLKNPEK 348
                 55566666666666666666633335655**********************98765 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0061
  Zeta_toxin  14 erPklillgGqpGAGKselaellkde 39 
                 + Pk +ll G pG GK+ la++++ e
  KHJ32475.1 355 KLPKGVLLIGPPGTGKTLLARAVAGE 380
                 67999****************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (802 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      599  (0.0334096); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 0.76u 0.30s 00:00:01.06 Elapsed: 00:00:00.45
# Mc/sec: 5296.97
//
Query:       KHJ32476.1  [L=338]
Description: putative glucose-inducible sam-dependent methyltransferase rrg1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-18   67.2   0.0    3.3e-18   66.0   0.0    1.7  2  Methyltransf_16  Lysine methyltransferase
  ------ inclusion threshold ------
      0.027   14.3   0.0      0.046   13.6   0.0    1.4  1  Methyltransf_23  Methyltransferase domain
      0.028   13.8   0.1       0.09   12.2   0.0    1.7  2  PrmA             Ribosomal protein L11 methyltransferase (Prm
      0.056   13.2   0.0      0.084   12.6   0.0    1.2  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
      0.096   12.5   0.0       0.56   10.0   0.0    2.0  1  Methyltransf_31  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.95   3.4e+03      95     116 ..      44      65 ..      28      72 .. 0.69
   2 !   66.0   0.0   9.3e-22   3.3e-18      43     162 ..     155     278 ..     104     290 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.95
  Methyltransf_16  95 alkskvkvevLdWgeeleedll 116
                        + ++  + L W  e+e+d++
       KHJ32476.1  44 DFSMRIIKSDLGWLSEIEKDIV 65 
                      5677888888999988888765 PP

  == domain 2  score: 66.0 bits;  conditional E-value: 9.3e-22
  Methyltransf_16  43 nelsklsvlELGsGtGlvGlavaellpeakviltDleellellkknielnkn....alkskvkvevLdWgeeleed.llekeevDlilaaDcvY 131
                      + +sk++vlELGsGtGl G+++a+   ++ v+ tDle+++e+l +ni+ln +        +v+ +vLdW  +++e+ + e +e++li+a D +Y
       KHJ32476.1 155 TLQSKIRVLELGSGTGLLGIVAAAV-WGVPVLSTDLEDVQENLCYNIQLNYDaisrVSGGSVSSKVLDW--RIPEKaFSELREFELIMATDPLY 245
                      3457889*************99998.99*********************988565556789********..556551556799*********** PP

  Methyltransf_16 132 ledslelLvkvLkellkkesk..vlvaykkrre 162
                      +e    + +++++  lkk+s+  +lva+  r +
       KHJ32476.1 246 DEFHPLAFARTVNLFLKKNSDsrLLVAIPLRDK 278
                      **9999999999999999988888888776655 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.3e-05     0.046      19     124 ..     155     278 ..     136     326 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.3e-05
  Methyltransf_23  19 klraggrvLdiGcGtGillevl.rengfsvtgvDlspeaveiaekakkaqkdqfdeq.........eaaepqg...............kfdlIv 87 
                      +l+++ rvL++G GtG l  v+ + +g+ v   Dl +++ ++      +++ ++d++         +     +                f+lI 
       KHJ32476.1 155 TLQSKIRVLELGSGTGLLGIVAaAVWGVPVLSTDLEDVQENLC----YNIQLNYDAIsrvsggsvsS-----KvldwripekafselrEFELIM 239
                      467788**********887777566899*******98888875....34444443333333333330.....1444444444566666999999 PP

  Methyltransf_23  88 lrevlehvpdppellrqiatllk..pgGylllseplasl 124
                      +++ l+   +p +  r+++  lk   + +ll+  pl++ 
       KHJ32476.1 240 ATDPLYDEFHPLAFARTVNLFLKknSDSRLLVAIPLRDK 278
                      999999999999999999998883335888888888776 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.5e-05      0.09     158     207 ..     155     203 ..     145     230 .. 0.83
   2 ?   -1.4   0.0      0.34   1.2e+03      74     100 ..     286     314 ..     261     322 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.5e-05
        PrmA 158 lvkegeevlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNaelN 207
                 +++++ +vl +G G+G+L i+aa +    v+ +D+++v  +    N++lN
  KHJ32476.1 155 TLQSKIRVLELGSGTGLLGIVAAAVWGVPVLSTDLEDVQENL-CYNIQLN 203
                 4677779****************************9986443.3455555 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.34
        PrmA  74 qlkese..lglekgkvkveeveeedWaee 100
                  lk +    + +  +v++e  +++dWa +
  KHJ32476.1 286 DLKRQLllRQFQIVSVDLELSQDNDWAGS 314
                 4444431122345577889999****865 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.3e-05     0.084      64      99 ..     149     184 ..     128     212 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.3e-05
                 HHHHHTT--TT-EEEEES-TTSHHHHHHHHHHCTTC CS
        PCMT  64 lalellelkkgarvLevGsGsGyltavlarlvgekg 99 
                  ++ l +l+ + rvLe+GsG+G l  v a + g   
  KHJ32476.1 149 NCIHLNTLQSKIRVLELGSGTGLLGIVAAAVWGVPV 184
                 5666667*****************999998877655 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00016      0.56       2     104 ..     157     264 ..     156     272 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00016
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelae...........elgpkae...vvGiDiseeaielArenaqklgldnveFeqgdieelekl.ledekfDlils 80 
                      ++++rvl+lG+GtG l++++a            e   + +    ++i  + +ai++            v+ ++ d+   ek+  e + f li++
       KHJ32476.1 157 QSKIRVLELGSGTGLLGIVAAAvwgvpvlstdlE---DVQenlCYNIQLNYDAISRVSGG-------SVSSKVLDWRIPEKAfSELREFELIMA 240
                      6899*****************8777776663332...33345577777777777777773.......455566666665555444577888888 PP

  Methyltransf_31  81 nevlnaladpdkileeiervlkpg 104
                       ++l++  +p ++ + +   lk++
       KHJ32476.1 241 TDPLYDEFHPLAFARTVNLFLKKN 264
                      888888888888888888888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       459  (0.025601); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.20s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 2776.56
//
Query:       KHJ32477.1  [L=271]
Description: hypothetical protein EV44_g3510 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.9e-07   28.5   0.4    1.8e-06   27.6   0.4    1.5  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type
     0.0058   15.8   0.0      0.009   15.2   0.0    1.2  1  DUF4532          Protein of unknown function (DUF4532)


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.4     2e-10   1.8e-06       1      67 [.     205     271 .]     205     271 .] 0.98

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 2e-10
  Retrotran_gag_2   1 wkkkdakalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesv 67 
                      w  +d+ a+ lI + ++++ + +v++ ++a+  W++L el+++++a+ k+ l+ k+ +l++++g+sv
       KHJ32477.1 205 WTHRDKIARILIKNLLNSKDYIQVQHIEHAAGTWKTLMELHQSTGAQGKVDLIWKFWNLRCNKGQSV 271
                      8899************************************************************997 PP

>> DUF4532  Protein of unknown function (DUF4532)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0     1e-06     0.009     128     246 ..      14     135 ..       6     149 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1e-06
     DUF4532 128 tfisstpiflda..nrknqvilrtvkelkeveklklrsearappldakGnilppknfkkyrhisagGrfepqGlqllpnplpndl..arswpcpnplph 222
                  fi s  i++d+  + k+  ilr+++e +e   + +      p            +f +  +  a  +fe+ Gl+l+ +  p     +rs p p  +p 
  KHJ32477.1  14 DFIISNHIYVDDinEEKKAQILRAAEEAEENVPVGVTKRKGKPRRSIAPQFTVEWSFSREAFQRAVYKFES-GLNLMGSEKPGVAgpSRSTPEPYIQPI 111
                 6999999**995336788889*******999999999999999999999999999**************96.9*****999965422899999999*** PP

     DUF4532 223 yqekalklallpsaplsqdlvrdy 246
                    + +  a  ps p s++l+r+ 
  KHJ32477.1 112 STTRNMSTAPSPSLPRSENLIRNN 135
                 *********************984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1907.40
//
Query:       KHJ32478.1  [L=367]
Description: hypothetical protein EV44_g3328 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.022   15.1   0.1        1.9    8.9   0.0    2.5  2  Linker_histone  linker histone H1 and H5 family


Domain annotation for each model (and alignments):
>> Linker_histone  linker histone H1 and H5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.0    0.0001       1.9      12      38 ..      15      42 ..      12      53 .. 0.83
   2 ?    3.4   0.0    0.0055        99      20      36 ..     204     220 ..     197     231 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0001
  Linker_histone 12 IkalkerkGsSrqaIkkyikakykvv.d 38
                    I +lk r G+S  +I +y++++++   d
      KHJ32478.1 15 IFSLKYRDGMSECQITQYVAENFPSHrD 42
                    7789*******************98543 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.0055
  Linker_histone  20 GsSrqaIkkyikakykv 36 
                      s   aIkk+ik+ + +
      KHJ32478.1 204 SSRDSAIKKFIKDSHLY 220
                     444579******98855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2823.04
//
Query:       KHJ32479.1  [L=184]
Description: putative secreted effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.44
# Mc/sec: 1254.62
//
Query:       KHJ32480.1  [L=562]
Description: putative atp-dependent protease la domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.9e-32  111.5   0.0      7e-32  111.0   0.0    1.2  1  LON_substr_bdg  ATP-dependent protease La (LON) substrate-bin
    1.2e-11   44.6  22.6    1.8e-06   28.0   4.0    2.8  2  zf-C3HC4_4      zinc finger of C3HC4-type, RING
    1.3e-11   44.2  24.6    1.1e-10   41.2   9.9    3.0  3  zf-C3HC4_2      Zinc finger, C3HC4 type (RING finger)
    1.1e-10   41.2  16.4    1.5e-08   34.3   6.3    2.5  2  zf-C3HC4_3      Zinc finger, C3HC4 type (RING finger)
    3.3e-10   40.1  18.8    5.8e-08   32.9   8.9    2.7  2  zf-RING_2       Ring finger domain
    3.8e-10   39.5  21.2      2e-07   30.7  10.3    2.8  2  zf-C3HC4        Zinc finger, C3HC4 type (RING finger)
    8.3e-10   38.5  22.2    1.5e-07   31.3   9.3    2.6  2  zf-RING_5       zinc-RING finger domain
    4.9e-09   36.1  25.8    1.1e-07   31.7   4.9    4.1  4  zf-RING_UBOX    RING-type zinc-finger
    0.00012   21.8   7.4    0.00012   21.8   7.4    2.7  2  Prok-RING_4     Prokaryotic RING finger family 4
    0.00072   19.3   2.5    0.00072   19.3   2.5    3.5  3  zf-RING_4       RING/Ubox like zinc-binding domain
      0.001   19.3   5.0      0.001   19.3   5.0    3.0  2  zf-rbx1         RING-H2 zinc finger domain
      0.007   16.3   1.2      0.007   16.3   1.2    2.1  2  Baculo_IE-1     Baculovirus immediate-early protein (IE-0)
     0.0086   15.7   5.4     0.0086   15.7   5.4    2.8  3  zf-P11          P-11 zinc finger
  ------ inclusion threshold ------
      0.016   15.3   4.7      0.016   15.3   4.7    2.6  2  zf-RING_10      zinc RING finger of MSL2
       0.69   10.0  13.0        1.9    8.6   1.5    2.7  2  DZR             Double zinc ribbon
       0.73    9.9  11.1        1.6    8.8   0.5    2.6  2  zinc-ribbons_6  zinc-ribbons
        1.4    8.8  11.3       0.23   11.4   3.4    2.4  2  zf-RING_6       zf-RING of BARD1-type protein
        4.6    7.5  12.2         12    6.3   0.9    2.8  2  IBR             IBR domain, a half RING-finger domain


Domain annotation for each model (and alignments):
>> LON_substr_bdg  ATP-dependent protease La (LON) substrate-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.0   0.0   7.1e-35     7e-32       1     207 [.     311     545 ..     311     546 .. 0.79

  Alignments for each domain:
  == domain 1  score: 111.0 bits;  conditional E-value: 7.1e-35
  LON_substr_bdg   1 elpllpldnkvlfPgitlpltvsrpksiaaierlldkdkpyigvflvkesqkdaide.esiselysvGtvarIvqilrlddgrikvvlegleRvk 94 
                     ++pl+ +  ++ fP +++ l++++p+++ +i+r++++++ ++g++l+  +q  +++   +   +y++Gt+  Iv+++rl++g i + + g++R++
      KHJ32480.1 311 KVPLFIC--TPSFPSMPTFLHIFEPRYRLMIRRVMETSERKFGMLLH--NQSRESQGnLGSVGFYEYGTMLHIVNMHRLPNGHILIETIGVSRFR 401
                     5899999..9***************************8889******..999999999999999******************************* PP

  LON_substr_bdg  95 ikkl.ekekeegylvaeveiiedd......................sepedsdslqkelkalvqe...........................iie 139
                     ++k      ++ y+ +++e+++d                       s            +a++ e                           +++
      KHJ32480.1 402 VVKYgI---KDEYTIGKIEPVDDIsvsdeealearetlqsrsisvkS------------DATTEEssynssqqtyyrpeamstqallevgvdFVK 481
                     ****44...57899*******66577777666665555433332220............222222222222222333344443443334333333 PP

  LON_substr_bdg 140 kikkslarellkllleielllkyedlenpyr.LadlvaailpfsneekqelLeeldvedRlkkvlelLk 207
                           ++e++  +l++   + y + ++ ++ + +++a++lp+s  +k+elL +++v+dRlk+++ ++k
      KHJ32480.1 482 -----RMQEQSAPWLQTRVFQAYGKCPQDPDfFPWWFASVLPISDMQKYELLSTESVRDRLKICVRWVK 545
                     .....456*********************************************************9987 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   4.0   1.8e-09   1.8e-06       1      31 [.      51      81 ..      51      91 .. 0.90
   2 !   21.7  10.7   1.7e-07   0.00017       1      42 []     224     261 ..     224     262 .. 0.94

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 1.8e-09
  zf-C3HC4_4  1 CPiCldYLekPvsleCGhsfClsCisslqke 31
                CP C++ L+ P++l+CG s C++Ci +l   
  KHJ32480.1 51 CPQCSNPLQSPTTLPCGNSLCMRCIPKLHVR 81
                *************************988665 PP

  == domain 2  score: 21.7 bits;  conditional E-value: 1.7e-07
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 C iC   + +P    CGh+fCl+C++++ +++     lCp C
  KHJ32480.1 224 CQICYGIFVDPYITTCGHTFCLKCLEKVFEHS----KLCPIC 261
                 9***************************9988....479999 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   2.4   0.00014      0.14       1      29 [.      50      77 ..      50      83 .. 0.90
   2 !   41.2   9.9   1.1e-13   1.1e-10       2      40 .]     224     261 ..     223     261 .. 0.98
   3 ?   -2.8   0.1       6.2   6.2e+03       4      17 ..     305     316 ..     304     321 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00014
  zf-C3HC4_2  1 kCpiCldmlkdpsvvtpCgHvfCqkCilr 29
                +Cp C + l+ p ++ pCg + C  Ci +
  KHJ32480.1 50 ECPQCSNPLQSP-TTLPCGNSLCMRCIPK 77
                6***********.999**********987 PP

  == domain 2  score: 41.2 bits;  conditional E-value: 1.1e-13
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLeekneCPlC 40 
                 C+iC+  + dp ++t CgH+fC kC+ +  e+++ CP+C
  KHJ32480.1 224 CQICYGIFVDP-YITTCGHTFCLKCLEKVFEHSKLCPIC 261
                 ***********.*************************** PP

  == domain 3  score: -2.8 bits;  conditional E-value: 6.2
  zf-C3HC4_2   4 iCldmlkdpsvvtp 17 
                 +C d +k p  ++ 
  KHJ32480.1 305 VCNDDMKVP--LFI 316
                 899999988..444 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   2.4   0.00014      0.13       4      35 ..      50      80 ..      47      85 .. 0.90
   2 !   34.3   6.3   1.6e-11   1.5e-08       3      46 ..     222     264 ..     220     268 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00014
                B-TTTSSSBS-EEETTEEEEEE-HHHHHHHHH CS
  zf-C3HC4_3  4 eCviClerprnvvllpCgHlvlCeeCaekllk 35
                eC+ C +  ++ + lpCg   lC +C  kl+ 
  KHJ32480.1 50 ECPQCSNPLQSPTTLPCGNS-LCMRCIPKLHV 80
                8*******************.******99976 PP

  == domain 2  score: 34.3 bits;  conditional E-value: 1.6e-11
                 SB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B CS
  zf-C3HC4_3   3 eeCviClerprnvvllpCgHlvlCeeCaekllkrkkkCpiCrrp 46 
                   C+iC+    +  +  CgH+ +C +C+ek+ +++k CpiCr++
  KHJ32480.1 222 LDCQICYGIFVDPYITTCGHT-FCLKCLEKVFEHSKLCPICRSS 264
                 68*******************.********************87 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   2.2   0.00019      0.19       2      37 ..      50      83 ..      49      99 .. 0.80
   2 !   32.9   8.9   5.8e-11   5.8e-08       2      44 .]     223     262 ..     222     262 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00019
   zf-RING_2  2 eCpICleelssadsvlllpCgHvfhreClerw.lrss 37
                eCp C ++l+   s+++lpCg + +  C+ ++ +r++
  KHJ32480.1 50 ECPQCSNPLQ---SPTTLPCGNSLCMRCIPKLhVRQN 83
                8****99995...566667**********77325554 PP

  == domain 2  score: 32.9 bits;  conditional E-value: 5.8e-11
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssstCPlCr 44 
                 +C IC+  + +++ ++   CgH+f+ +Cle+ +++s+ CP+Cr
  KHJ32480.1 223 DCQICYGIFVDPYITT---CGHTFCLKCLEKVFEHSKLCPICR 262
                 6****98887655544...***********************9 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   3.1   4.5e-05     0.045       1      29 [.      51      78 ..      51      86 .. 0.91
   2 !   30.7  10.3     2e-10     2e-07       1      41 []     224     261 ..     224     261 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.5e-05
                -TTT-S--SS-E.E-TTS--B-CHHHHHH CS
    zf-C3HC4  1 CpiCleeakepnelleCkHsfCskCirki 29
                Cp C + ++ p+ +l+C+ s+C  Ci k+
  KHJ32480.1 51 CPQCSNPLQSPT-TLPCGNSLCMRCIPKL 78
                ************.*************876 PP

  == domain 2  score: 30.7 bits;  conditional E-value: 2e-10
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 C+iC   +++p  +++C+H+fC kC++k+ +   ++ CP+C
  KHJ32480.1 224 CQICYGIFVDPY-ITTCGHTFCLKCLEKVFE--HSKLCPIC 261
                 ************.******************..4455**** PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   4.9   9.9e-05     0.099       1      33 [.      50      79 ..      50     103 .. 0.89
   2 !   31.3   9.3   1.5e-10   1.5e-07       2      43 ..     224     262 ..     223     263 .. 0.96

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 9.9e-05
   zf-RING_5  1 hCnkCfeklskeekfyltsCgHifCekClkkll 33
                +C++C+++l   + + +++Cg ++C +C+ kl 
  KHJ32480.1 50 ECPQCSNPL---QSPTTLPCGNSLCMRCIPKLH 79
                6********...9****************9887 PP

  == domain 2  score: 31.3 bits;  conditional E-value: 1.5e-10
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCr 43 
                 C++C+  +    ++y+t+CgH+fC kCl k +e ++ CpiCr
  KHJ32480.1 224 CQICYGIF---VDPYITTCGHTFCLKCLEKVFEHSKLCPICR 262
                 ********...99****************************9 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   3.3   1.6e-05     0.016       1      26 [.      51      82 ..      51      95 .. 0.77
   2 !   31.7   4.9   1.1e-10   1.1e-07       1      34 [.     224     254 ..     224     259 .. 0.77
   3 ?    0.9   0.2      0.48   4.8e+02       1       6 [.     258     263 ..     258     270 .. 0.85
   4 ?   -1.1   0.4         2     2e+03       3      16 ..     305     317 ..     304     319 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.6e-05
  zf-RING_UBOX  1 CpIClelftdPlv.lpCGHtFCreCl......w 26
                  Cp C ++++ P   lpCG ++C +C+      +
    KHJ32480.1 51 CPQCSNPLQSP-TtLPCGNSLCMRCIpklhvrQ 82
                  ***********.536***********6443321 PP

  == domain 2  score: 31.7 bits;  conditional E-value: 1.1e-10
  zf-RING_UBOX   1 CpIClelftdPlvlpCGHtFCreClwelsksleg 34 
                   C IC+  f dP +++CGHtFC +Cl    k  e 
    KHJ32480.1 224 CQICYGIFVDPYITTCGHTFCLKCL---EKVFEH 254
                   ***********3358**********...344444 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.48
  zf-RING_UBOX   1 CpICle 6  
                   CpIC++
    KHJ32480.1 258 CPICRS 263
                   ****86 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 2
  zf-RING_UBOX   3 IClelftdPlvlpC 16 
                   +C+++++ Pl+  C
    KHJ32480.1 305 VCNDDMKVPLFI-C 317
                   8******99333.6 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   2.6      0.23   2.3e+02       1      27 [.      51      77 ..      49      83 .. 0.84
   2 !   21.8   7.4   1.2e-07   0.00012       1      39 [.     224     264 ..     224     270 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.23
  Prok-RING_4  1 CvlCgeqekkailepCgHlvCkeCfds 27
                 C  C++  + +   pCg  +C +C  +
   KHJ32480.1 51 CPQCSNPLQSPTTLPCGNSLCMRCIPK 77
                 66788888888999**********865 PP

  == domain 2  score: 21.8 bits;  conditional E-value: 1.2e-07
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCfdsk.dls.sCPlCqrr 39 
                  C +C     ++ +  CgH +C +C+++  ++s  CP+C++ 
   KHJ32480.1 224 CQICYGIFVDPYITTCGHTFCLKCLEKVfEHSkLCPICRSS 264
                  888888889999***************9877779****976 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1         1     1e+03      38      45 ..      49      56 ..      41      59 .. 0.79
   2 ?    0.2   0.1      0.67   6.7e+02      19      32 ..      65      78 ..      60      84 .. 0.84
   3 !   19.3   2.5   7.3e-07   0.00072      19      45 ..     238     263 ..     232     265 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1
   zf-RING_4 38 grCPaCre 45
                + CP+C +
  KHJ32480.1 49 AECPQCSN 56
                67****76 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.67
   zf-RING_4 19 eCgyqiClfCyhri 32
                +Cg  +C+ C  ++
  KHJ32480.1 65 PCGNSLCMRCIPKL 78
                69********7665 PP

  == domain 3  score: 19.3 bits;  conditional E-value: 7.3e-07
   zf-RING_4  19 eCgyqiClfCyhrileeeegrCPaCre 45 
                 +Cg+ +Cl C++++ e +++ CP Cr+
  KHJ32480.1 238 TCGHTFCLKCLEKVFE-HSKLCPICRS 263
                 7**************7.69*******7 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.4      0.45   4.5e+02      13      43 ..      50      77 ..      44      84 .. 0.80
   2 !   19.3   5.0     1e-06     0.001      28      55 .]     235     262 ..     218     262 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.45
     zf-rbx1 13 acieckapgdeecpvvlGeCgHaFHlhCisk 43
                +c++c++p ++  p +l  Cg +  + Ci k
  KHJ32480.1 50 ECPQCSNPLQS--PTTL-PCGNSLCMRCIPK 77
                79999999988..6666.8998888888865 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 1e-06
     zf-rbx1  28 vlGeCgHaFHlhCiskWlktrkvCPlcr 55 
                  + +CgH+F l+C++k ++++k CP+cr
  KHJ32480.1 235 YITTCGHTFCLKCLEKVFEHSKLCPICR 262
                 5679***********************8 PP

>> Baculo_IE-1  Baculovirus immediate-early protein (IE-0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.4       1.5   1.5e+03     101     116 ..      65      80 ..      41     100 .. 0.71
   2 !   16.3   1.2     7e-06     0.007      63     133 ..     201     270 ..     185     276 .. 0.65

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 1.5
  Baculo_IE-1 101 ccGykicnlcyanlwk 116
                   cG ++c  c  +l  
   KHJ32480.1  65 PCGNSLCMRCIPKLHV 80 
                  5999****99988864 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 7e-06
  Baculo_IE-1  63 klinervqvlnvflek...klyqcnicedtsaeerflkPneccGykicnlcyanlwkfstvyPvcPvcktsfks 133
                  + +n+r + + + l++      +c+ic   +++       + cG+  c  c  +++++s++ P+c   +t   s
   KHJ32480.1 201 ENLNRRNNSILLRLKEairSELDCQICYGIFVDPYI----TTCGHTFCLKCLEKVFEHSKLCPICRSSQTRTTS 270
                  555555544444433302233579999988877643....68*****************985555554444333 PP

>> zf-P11  P-11 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.5       0.7     7e+02      37      47 ..      50      62 ..      43      65 .. 0.75
   2 ?   -3.6   0.9       9.5   9.4e+03      23      28 ..      70      75 ..      66      79 .. 0.79
   3 !   15.7   5.4   8.6e-06    0.0086       4      42 ..     223     262 ..     220     266 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.7
                BETTTSSB-..-- CS
      zf-P11 37 rCpiCkkPL..Pt 47
                 Cp C  PL  Pt
  KHJ32480.1 50 ECPQCSNPLqsPT 62
                5*******95556 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 9.5
                EEHHHH CS
      zf-P11 23 LClrCl 28
                LC+rC 
  KHJ32480.1 70 LCMRCI 75
                899996 PP

  == domain 3  score: 15.7 bits;  conditional E-value: 8.6e-06
                 SBTTTSS--.SSEEE-SSSEEEHHHHHHHHHHSSBETTTS CS
      zf-P11   4 sCksCWfkd.ksLveCsdHYLClrClqllLsvserCpiCk 42 
                  C+ C+  + +  ++   H  Cl+Cl+ +   s++CpiC+
  KHJ32480.1 223 DCQICYGIFvDPYITTCGHTFCLKCLEKVFEHSKLCPICR 262
                 688888543255677778*********************8 PP

>> zf-RING_10  zinc RING finger of MSL2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   2.8      0.68   6.8e+02       3      31 ..      51      76 ..      49      85 .. 0.77
   2 ?   15.3   4.7   1.6e-05     0.016       1      47 [.     222     265 ..     222     277 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.68
  zf-RING_10  3 CvvCckLLvdPlepkekeCqHyvCrlCvg 31
                C  C++ L+ P   ++  C+ ++C +C+ 
  KHJ32480.1 51 CPQCSNPLQSP---TTLPCGNSLCMRCIP 76
                66677777655...5679*********86 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 1.6e-05
  zf-RING_10   1 lsCvvCckLLvdPlepkekeCqHyvCrlCvgkkkklkpsCsqCkdye 47 
                 l C +C  + vdP+     +C+H  C +C+ k  +    C+ C++ +
  KHJ32480.1 222 LDCQICYGIFVDPYIT---TCGHTFCLKCLEKVFEHSKLCPICRSSQ 265
                 67************87...8**********99888888888887554 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   1.5    0.0019       1.9      15      42 ..      51      82 ..      43      87 .. 0.83
   2 ?    5.8   4.2     0.014        14      28      48 ..     241     261 ..     216     274 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0019
         DZR 15 CseCgtklkavaa....edrCpsCgekvdpea 42
                C++C ++l+++++    +  C++C  k++ ++
  KHJ32480.1 51 CPQCSNPLQSPTTlpcgNSLCMRCIPKLHVRQ 82
                99******988889999999*99977766655 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.014
         DZR  28 edrCpsCgekvdpearfCpeC 48 
                 +++C +C ekv + ++ Cp C
  KHJ32480.1 241 HTFCLKCLEKVFEHSKLCPIC 261
                 555555555555555555555 PP

>> zinc-ribbons_6  zinc-ribbons
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.5    0.0016       1.6      26      62 ..      45      82 ..      41      87 .. 0.69
   2 ?    4.4   4.5     0.038        38       3      38 ..     224     264 ..     222     270 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0016
                    EEEEEE-SSS-S---EEEE..TTEEEE--TTT.T----TT CS
  zinc-ribbons_6 26 lkkealCpeCeqelevlka..CgavdyfCnkc.neLiSkk 62
                    + + a Cp+C+++l+      Cg    +C +c  +L  ++
      KHJ32480.1 45 ILRIAECPQCSNPLQSPTTlpCGN--SLCMRCiPKLHVRQ 82
                    678899********9866522665..78888833555555 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.038
                     -SSS-S--EE-S....SEEE-TTT--.EEEEEEE-SSS-S- CS
  zinc-ribbons_6   3 CpeCqqelekrg....eqyhCeaCqe.dlkkealCpeCeqe 38 
                     C+ C    +        +++C +C e  ++  +lCp C+++
      KHJ32480.1 224 CQICYGIFVDPYittcGHTFCLKCLEkVFEHSKLCPICRSS 264
                     7777666553333455899*****77478999******975 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   1.0      0.26   2.6e+02       7      36 ..      48      76 ..      42      86 .. 0.85
   2 ?   11.4   3.4   0.00023      0.23       8      47 ..     222     262 ..     212     271 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.26
   zf-RING_6  7 llrcsrctdilrepvclggcehifcsncis 36
                +  c +c++ l+ p  l  c   +c  ci 
  KHJ32480.1 48 IAECPQCSNPLQSPTTLP-CGNSLCMRCIP 76
                567999*********995.88999999995 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00023
   zf-RING_6   8 lrcsrctdilrepvclggcehifcsncisdcfgsg..cpvcy 47 
                 l c  c  i+ +p  +  c h fc  c+   f     cp+c 
  KHJ32480.1 222 LDCQICYGIFVDPY-ITTCGHTFCLKCLEKVFEHSklCPICR 262
                 78999********7.679**************75445****6 PP

>> IBR  IBR domain, a half RING-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.9     0.012        12      18      57 ..      48      79 ..      40      83 .. 0.77
   2 ?    4.9   4.6      0.03        30      42      57 ..     237     254 ..     215     262 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.012
         IBR 18 lkwCprpdCeaiieksegcksvtCskCgfefCfnCkkewH 57
                +  Cp  +C++++++         + Cg + C++C  + H
  KHJ32480.1 48 IAECP--QCSNPLQSPTT-----LP-CGNSLCMRCIPKLH 79
                56799..9**99977776.....35.88888888866666 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.03
         IBR  42 skCgfefCfnCkkew..H 57 
                 ++Cg+ fC++C+++   H
  KHJ32480.1 237 TTCGHTFCLKCLEKVfeH 254
                 57*********9987555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (562 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.58u 0.23s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 4013.81
//
Query:       KHJ32481.1  [L=1005]
Description: putative mitochondrial inner membrane atp-binding cassette transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.4e-34  118.8   0.9    8.1e-34  117.1   0.0    2.3  3  ABC_tran      ABC transporter
    1.2e-30  107.1  16.6    1.2e-30  107.1  16.6    2.0  3  ABC_membrane  ABC transporter transmembrane region
    2.6e-07   30.3   0.8    2.6e-07   30.3   0.8    2.7  2  SMC_N         RecF/RecN/SMC N terminal domain
     0.0068   16.7   0.2      0.037   14.3   0.2    2.1  1  AAA_22        AAA domain
  ------ inclusion threshold ------
      0.035   14.5   0.1       0.24   11.8   0.1    2.3  1  AAA           ATPase family associated with various cellular 
      0.039   14.2   0.2       0.65   10.3   0.2    2.8  1  SbcCD_C       Putative exonuclease SbcCD, C subunit
      0.061   13.7   0.2        0.2   12.0   0.2    1.9  1  AAA_16        AAA ATPase domain
      0.093   12.5   0.1       0.24   11.2   0.1    1.7  1  AAA_29        P-loop containing region of AAA domain
       0.11   12.5   0.2        2.1    8.3   0.2    2.4  1  AAA_5         AAA domain (dynein-related subfamily)


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.1   0.0   4.1e-37   8.1e-34       1     137 []     671     820 ..     671     820 .. 0.90
   2 ?   -1.5   0.0       1.7   3.4e+03      99     120 ..     827     847 ..     822     862 .. 0.68
   3 ?   -3.3   0.3       5.9   1.2e+04      76      91 ..     962     991 ..     922    1001 .. 0.44

  Alignments for each domain:
  == domain 1  score: 117.1 bits;  conditional E-value: 4.1e-37
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.......HHHTCHHHHHHHS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.......esdeeiekalskl 92 
                 l+ +++++ +g+++a+vGe+G GKSt+++ll + ++ ++G i++dg+++ke+++eslr++igv+pq++ lf+e+ v  n       + dee+++a +  
  KHJ32481.1 671 LNGLTFNCPPGTTTALVGESGGGKSTVFRLLFRFYNAESGIIEIDGHNVKEIKIESLRSHIGVVPQDTILFNET-VMYNlryanqnATDEEVYEACRAA 768
                 6889*******************************************************************999.666669998886666666666666 PP

                 TTGG.......TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  93 glke.......lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                 ++++         +t+v++++  LSgG+kqrva+ara++k+pk++llDE+ta
  KHJ32481.1 769 SIHDkimafpdGYNTKVGERGLRLSGGEKQRVAIARAIIKNPKIILLDEATA 820
                 66666666666789999*********************************96 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.7
                 CBGESTTSGGS-HHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  99 dtvvksspssLSgGqkqrvala 120
                 ++++++s ++LS+G    v +a
  KHJ32481.1 827 EQNIQKSLKTLSQGRTMLV-IA 847
                 567778889*****76554.44 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 5.9
                 HHHH..............HHHTCHHHHHHH CS
                 xxxx..............xxxxxxxxxxxx RF
    ABC_tran  76 vren..............esdeeiekalsk 91 
                 v +n              +++++++  +++
  KHJ32481.1 962 VSNNiksnsvsddrgylmKKQVNVDSNMEH 991
                 222233334444455554444445555554 PP

>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.5   0.2       6.5   1.3e+04     140     153 ..      33      46 ..       9      50 .. 0.58
   2 ?   -2.7   0.1       1.8   3.6e+03     193     218 ..     182     207 ..     180     234 .. 0.75
   3 !  107.1  16.6   6.1e-34   1.2e-30       2     274 .]     333     609 ..     332     609 .. 0.95

  Alignments for each domain:
  == domain 1  score: -4.5 bits;  conditional E-value: 6.5
                   SHHHHHHHHHHHHH CS
  ABC_membrane 140 gwkltlvllailpl 153
                   + +l +v++ai++l
    KHJ32481.1  33 SSWLLFVIFAIAFL 46 
                   33344444444444 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.8
                   HHHTTTHHHHHHHHHHHHHHHHHHHH CS
  ABC_membrane 193 Vkafgreeyflekfekaleeakkagi 218
                   V +++  +++l+ f+++++++++ ++
    KHJ32481.1 182 VSIYNSPQKYLNSFNENNQKVLREQK 207
                   77899999999999999999988765 PP

  == domain 3  score: 107.1 bits;  conditional E-value: 6.1e-34
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHH.....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHH CS
  ABC_membrane   2 iliillailagvlsplfplvlgrildtlldkgdpet.....ealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqpmsffd 93 
                   ++++ll++ + v+++++pl +g+++d+l+    + +     + ++++++l+ +l   ++il+++++ l++ ++++   +l +  f++++ +++ f+ 
    KHJ32481.1 333 VVCFLLLLGQRVVNIIVPLQIGKVTDHLTNREHA-SsisvpWSSIFFMILFKFLQGSSGILGIIRQVLWIPIAQYSYGALTTASFEHVHGLSLDFHL 428
                   6899*************************85333.359999******************************************************** PP

                   HSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH.HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
  ABC_membrane  94 tnsvGellsrltndvsklrdglgeklglffqslltfvgg.livmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsg 189
                   ++++Ge++s l++  + ++ +l +  +++f  ++ +++g + +++ +  + ++++ ++++ +++v++ +a++ ++ ++k+ +   +  +v ++sl+ 
    KHJ32481.1 429 SKRTGEVISALNKGGA-INVFLENITFQVFPMVFDLCVGiFYFGLAFDAYYAIIVAILTFTYMYVTIRVASWRSNQRRKMTNLSREEDAVKTDSLMS 524
                   ***********87766.****************9766551667777*************************************************** PP

                   HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHHH CS
  ABC_membrane 190 irtVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailfgal 274
                   ++tVk+f++e ++ +++ +a+ +++k  +++ ++ ++l +i+++++l+  +++  +++++v ++  +vgd+v++l+++++l+g+l
    KHJ32481.1 525 YETVKYFNAEVFEFNRYRQAVCDVQKMEVSVYLSMNILVVIQYVIFLAGLLVTSIIAAYQVTTHVRQVGDFVTLLTYMSQLQGPL 609
                   ***********************************************************************************96 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.8   1.3e-10   2.6e-07     102     210 ..     703     861 ..     672     868 .. 0.81
   2 ?   -2.5   1.3       1.4   2.8e+03      68     109 ..     931     972 ..     923     995 .. 0.74

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 1.3e-10
                 EEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT......................................................CS-HHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......................................................xxxxxxxxxxx RF
       SMC_N 102 rvkrkgeseykingkevtkkevsellesagiske......................................................lLSgGektLva 146
                 r ++ ++  ++i+g++v++ ++++l ++ g+ ++                                                       LSgGek+ va
  KHJ32481.1 703 RFYNAESGIIEIDGHNVKEIKIESLRSHIGVVPQdtilfnetvmynlryanqnatdeevyeacraasihdkimafpdgyntkvgerglRLSGGEKQRVA 801
                 55555566667777777777777777777777777777777777777777777777777777777777777*************************998 PP

                 HHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 147 laLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklvg 210
                 +a   Ai  +k   + llDe  aaLD +  +++ + lk+ s+   ++vi++r  +++ ad+++ 
  KHJ32481.1 802 IAR--AI--IKNPKIILLDEATAALDSETEQNIQKSLKTLSQGRTMLVIAHRLSTITTADQILV 861
                 874..34..5566699*******************************************99875 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.4
                 BTTCSSTTEEEEEEEEEETTEESSSSSSCEEEEEEEETTSEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  68 skekasvkkaeveitfdnedkklkiekeevsisrrvkrkges 109
                 ++e++ ++k +v+ ++dn +++++++++ + +s ++k++  s
  KHJ32481.1 931 TSEHEGANKQYVTKLVDNCNETSQQDQKVMHVSNNIKSNSVS 972
                 567888999999999999999988888888888888877654 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.2   1.8e-05     0.037       8      38 ..     684     729 ..     680     853 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.8e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaee...............e 38 
                 ++++GesG GK+t+ r l++ +++e+ + e                
  KHJ32481.1 684 TALVGESGGGKSTVFRLLFRFYNAESGIIEidghnvkeikieslrS 729
                 789*******************887666666664444444444441 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   0.00012      0.24       3      98 ..     686     843 ..     684     869 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00012
                 EESSTTSSHHHHHHHHHHHHTHE..........EEEEETTTCSSS...................................................... CS
         AAA   3 lyGppGtGKTllakavakelgve..........fleisgsellsk...................................................... 37 
                 l+G  G GK+++ + + +  ++e          + ei+  +l+s+                                                      
  KHJ32481.1 686 LVGESGGGKSTVFRLLFRFYNAEsgiieidghnVKEIKIESLRSHigvvpqdtilfnetvmynlryanqnatdeevyeacraasihdkimafpdgyntk 784
                 8999************9997533332222222255555555555599999999999999*9***********************************998 PP

                 .....STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTT CS
         AAA  38 .....yvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkk 98 
                      +   + +k r  +++a  k+ p+i+++DE+ a   s+       e+++++ L t  +g + 
  KHJ32481.1 785 vgergLRLSGGEKQRVAIARAIIKN-PKIILLDEATAALDSE------TEQNIQKSLKTLSQGRTM 843
                 8888866666677777777777776.9***********9999......666666666665555554 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.2   0.00033      0.65      20      85 ..     779     831 ..     770     839 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00033
     SbcCD_C  20 dgkekelsrssgtlSGGekqflaylalaaalaalyssaegrepalrlvfLDEAFsklDeesiatll 85 
                 dg ++++ ++  +lSGGekq    +a+a     ++ +      ++++++LDEA + lD+e+ +++ 
  KHJ32481.1 779 DGYNTKVGERGLRLSGGEKQR---VAIA----RAIIK------NPKIILLDEATAALDSETEQNIQ 831
                 566666777777788888843...3333....33333......489************99876654 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.2    0.0001       0.2      25      63 ..     682     721 ..     676     953 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.0001
      AAA_16  25 elvllsGesGvGKsslvrellralekdggif.lrgkcdql 63 
                   + l+GesG GKs++ r l+r ++++ gi  + g++++ 
  KHJ32481.1 682 TTTALVGESGGGKSTVFRLLFRFYNAESGIIeIDGHNVKE 721
                 56789*****************999996555588877766 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   0.00012      0.24      16      39 ..     675     698 ..     670     700 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00012
      AAA_29  16 tieidlkgatlltGpsGsGKSTll 39 
                 t++  +  +t l+G+sG GKST++
  KHJ32481.1 675 TFNCPPGTTTALVGESGGGKSTVF 698
                 555655569*************85 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.2    0.0011       2.1       4      32 ..     686     714 ..     684     857 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0011
                 EE--SSSSHHHHHHHGGGGBS--EEEEE- CS
       AAA_5   4 LvGppGtgKselaerlaaalnreveyvql 32 
                 LvG++G gKs++ + l +++n+e  ++ +
  KHJ32481.1 686 LVGESGGGKSTVFRLLFRFYNAESGIIEI 714
                 9******************9988777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1005 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1308  (0.0729544); expected 358.6 (0.02)
Passed bias filter:                      560  (0.0312343); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.82u 0.28s 00:00:01.10 Elapsed: 00:00:00.47
# Mc/sec: 6453.71
//
Query:       KHJ32482.1  [L=469]
Description: putative lag1 ceramide synthase membrane component lac1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.2e-38  130.3  15.8    7.2e-38  130.3  15.8    1.9  2  TRAM_LAG1_CLN8  TLC domain
    1.2e-23   82.5   0.2    1.2e-23   82.5   0.2    2.3  2  TRAM1           TRAM1-like protein


Domain annotation for each model (and alignments):
>> TRAM_LAG1_CLN8  TLC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.2      0.29   2.6e+03     160     188 ..      87     115 ..      81     117 .. 0.68
   2 !  130.3  15.8     8e-42   7.2e-38       1     198 []     190     395 ..     190     395 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.29
  TRAM_LAG1_CLN8 160 ldvaklslstaplwlpliflilllvLqll 188
                     l+++k+ +   ++ +pl+++++ l L++ 
      KHJ32482.1  87 LQQWKRYALRHTWVTPLVLIAVFLSLYVF 115
                     56666666666677777777777777665 PP

  == domain 2  score: 130.3 bits;  conditional E-value: 8e-42
  TRAM_LAG1_CLN8   1 kfdervvslvqyllstvfglivlsssp.......elwegyperilgathfllkayyllalgYfiyd.llvlllyekkrkdfvemliHhiitlvll 87 
                     +f e+++ ++++ ++  +gl+v+s +p        ++eg p+ +++a    +k+yyl++++Y+ ++ ++++l +ek rkdf+e++ Hhi++l+l+
      KHJ32482.1 190 RFMEQMYTAIYFGIVGPWGLYVMSRTPvwyfnaqGMFEGFPHKTHDA---NFKFYYLFQAAYWAQQaIVLILGMEKPRKDFKELVGHHIVSLALI 281
                     699************************66665555555557777766...****************8778888999******************* PP

  TRAM_LAG1_CLN8  88 vlsyvrnlgrvglvvlllhelsdpflnlrkilsylkkkskssklvlfngllfllsFfvcRlvllpylillsildvaklslstap.........lw 173
                      lsy +++  +gl+v+++h++sd+fl+++k+l+yl ++   ++  +f   +f+l+++++R++l    il+s +++++   + +          + 
      KHJ32482.1 282 GLSYRFHFAYMGLGVFITHDISDFFLATSKTLNYL-NH--PLVGPYF--GFFILTWIYLRHYLNLR-ILWSEFNEFQTVGPYVLdwksgqfkcPL 370
                     ***********************************.66..56899**..*************7755.6666666665444443366677766699 PP

  TRAM_LAG1_CLN8 174 lpliflilllvLqllnlyWfylivk 198
                       +i  +ll  Lq+lnl+W+y i++
      KHJ32482.1 371 AHYISTALLTSLQSLNLFWLYHIIR 395
                     99999999999************97 PP

>> TRAM1  TRAM1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.5   0.2   1.4e-27   1.2e-23       1      63 [.     123     185 ..     123     186 .. 0.94
   2 ?   -0.9   0.5      0.15   1.3e+03      33      50 ..     326     343 ..     323     345 .. 0.82

  Alignments for each domain:
  == domain 1  score: 82.5 bits;  conditional E-value: 1.4e-27
       TRAM1   1 tskFifLsynvplsansetglYgkGlkDlafvffyvivftflRaflmeyvlrPlarrlgikkk 63 
                 +++F+fLsy++pl+  +  + Y+kGl+D+afvff+vi+++f+R+f+m+ +lrPl+rr+g++++
  KHJ32482.1 123 IHHFLFLSYKLPLEPGQRRPVYAKGLWDIAFVFFHVIILSFTREFIMQKFLRPLSRRCGLRSR 185
                 69**********876778888****************************************98 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.15
       TRAM1  33 ffyvivftflRaflmeyv 50 
                  f+++ ++ lR  l   +
  KHJ32482.1 326 GFFILTWIYLRHYLNLRI 343
                 699********9886666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3605.99
//
Query:       KHJ32483.1  [L=694]
Description: hypothetical protein EV44_g2899 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.7e-16   58.2   0.8    6.7e-16   58.2   0.8    1.8  2  Integrase_H2C2  Integrase zinc binding domain
    1.7e-14   53.7   0.0    5.9e-14   51.9   0.0    1.9  2  RT_RNaseH_2     RNase H-like domain found in reverse transcri
    1.8e-14   53.9   0.1    9.1e-14   51.6   0.0    2.2  3  RT_RNaseH       RNase H-like domain found in reverse transcri
    8.9e-06   25.9   0.0      0.095   12.9   0.0    2.8  3  rve             Integrase core domain
    8.3e-05   22.4   1.8    0.00021   21.1   1.8    1.8  1  Chromo          Chromo (CHRromatin Organisation MOdifier) dom
     0.0014   18.8   0.7     0.0029   17.8   0.7    1.6  1  zf-H2C2         H2C2 zinc finger


Domain annotation for each model (and alignments):
>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.2   0.8   2.2e-19   6.7e-16       3      56 ..     188     243 ..     186     245 .. 0.95
   2 ?   -3.5   0.0       4.1   1.2e+04       7      16 ..     509     518 ..     506     526 .. 0.75

  Alignments for each domain:
  == domain 1  score: 58.2 bits;  conditional E-value: 2.2e-19
  Integrase_H2C2   3 kslrkeilkeaHds..agHlGiektlerlrrryyWpgmrkdvkkyvksCetCqrrk 56 
                     ++lr  i++eaHd+  ++Hl+++ktl++l +r yW+gm++++ +y+++C+ C r+ 
      KHJ32483.1 188 NNLRTLIIREAHDQisSAHLSAKKTLRLLPKRNYWKGMSNHISQYCRNCHLCRRSS 243
                     579*************************************************9975 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 4.1
  Integrase_H2C2   7 keilkeaHds 16 
                     ++++k+ Hd 
      KHJ32483.1 509 RKMIKQQHDA 518
                     7899999996 PP

>> RT_RNaseH_2  RNase H-like domain found in reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   0.0     2e-17   5.9e-14      33      85 ..       2      53 ..       1      61 [. 0.93
   2 ?   -3.9   0.0       4.8   1.4e+04      47      66 ..      98     117 ..      97     120 .. 0.76

  Alignments for each domain:
  == domain 1  score: 51.9 bits;  conditional E-value: 2e-17
  RT_RNaseH_2 33 letDaSdtgigavLsqedddgkerpiafaSrklskaernysttekellAivwa 85
                 letDaSd  +++vLsq++ d  + p+af+S++l +ae ny++++ke+lAi + 
   KHJ32483.1  2 LETDASDGVVAGVLSQKHGD-DWLPVAFFSKTLAPAELNYAVYDKEMLAIARW 53
                 89*****************5.69***************************875 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 4.8
  RT_RNaseH_2  47 sqedddgkerpiafaSrkls 66 
                  +q   d++  p+   Sr l 
   KHJ32483.1  98 QQLLRDNQVDPVILLSRELR 117
                  56666677899999999986 PP

>> RT_RNaseH  RNase H-like domain found in reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   0.0     3e-17   9.1e-14       8      59 ..       2      52 ..       1      66 [. 0.93
   2 ?   -2.9   0.0       2.9   8.6e+03      21      41 ..      97     117 ..      86     121 .. 0.80
   3 ?   -3.3   0.0       3.6   1.1e+04      18      34 ..     372     388 ..     370     393 .. 0.76

  Alignments for each domain:
  == domain 1  score: 51.6 bits;  conditional E-value: 3e-17
                EEEEECTEEEEEEEEEETTE..EEEEEEEEEE--HHHHTS-HHHHHHHHHHH CS
   RT_RNaseH  8 letDAsddgigavLsqreedgeerpiafaSrklsgaernystiekellAiva 59
                letDAsd ++++vLsq ++ + + p+af+S++l +ae ny++++ke+lAi  
  KHJ32483.1  2 LETDASDGVVAGVLSQ-KHGDDWLPVAFFSKTLAPAELNYAVYDKEMLAIAR 52
                89**************.99999****************************86 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.9
                 EEEETTE..EEEEEEEEEE-- CS
   RT_RNaseH  21 LsqreedgeerpiafaSrkls 41 
                 L+q  +d++  p+  +Sr l 
  KHJ32483.1  97 LQQLLRDNQVDPVILLSRELR 117
                 677778888899999999886 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 3.6
                 EEEEEEETTE..EEEEE CS
   RT_RNaseH  18 gavLsqreedgeerpia 34 
                 g +Lsqr++d++e +++
  KHJ32483.1 372 GSILSQRTSDENELLVQ 388
                 789***98888766655 PP

>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       4.2   1.3e+04      79      95 ..      93     109 ..      85     125 .. 0.76
   2 !   12.9   0.0   3.2e-05     0.095       2      45 ..     260     302 ..     259     313 .. 0.88
   3 !    9.9   0.0   0.00027       0.8      78     118 ..     400     440 ..     394     441 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 4.2
         rve  79 tskafrefladlgirvs 95 
                 +s++++++l+d+++++ 
  KHJ32483.1  93 KSQRLQQLLRDNQVDPV 109
                 57799999999999876 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 3.2e-05
         rve   2 trpgelwqvDvtvvripdgggkayllvvvddfsrlilaealsde 45 
                 +rp e++++D++ ++ +d+ g   +lv++d fs+ ++ ++ + +
  KHJ32483.1 260 SRPWEHVTMDFCCFN-KDKHGYDKVLVIIDRFSKQAISMPAKLK 302
                 5899********999.99999*************9999887665 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00027
         rve  78 ytskafrefladlgirvsftrpgrpqdnGkvErfhrtlkde 118
                 ++s  + ef + lg++v+++ + +pq+ G  E  +++l ++
  KHJ32483.1 400 FISAFWNEFNKILGTKVKLSTANHPQTDGQTEIYNQYLQKR 440
                 67777999*****************************9875 PP

>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   1.8   7.1e-08   0.00021       1      52 [.     632     679 ..     632     681 .. 0.88

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 7.1e-08
                 EEEEEEEEEEEETTEECEEEEEEETTSTGGGT.EEEEGGGCSSHSHHHHHHHH CS
      Chromo   1 yeVerIidhrtdkdgleleYlVKWkglpysen.tWEpeenlekcfqelideFk 52 
                 +e+e+++++r+++ +l  eY V W +   +e+  W ++++l+   +++i+eF+
  KHJ32483.1 632 WEIEKVLASRVKRQRL--EYRVAWLNK--DEDlDWISASDLKYA-PHKIKEFH 679
                 79**************..******765..45557*******955.*******9 PP

>> zf-H2C2  H2C2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.7   9.5e-07    0.0029       4      38 ..     205     239 ..     203     240 .. 0.96

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 9.5e-07
     zf-H2C2   4 tHlGinkltallarkYhwlgiketvseVissCkaC 38 
                  Hl+++k+  ll ++ +w+g ++++s+ +++C  C
  KHJ32483.1 205 AHLSAKKTLRLLPKRNYWKGMSNHISQYCRNCHLC 239
                 6*******************************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (694 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       513  (0.0286129); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 5073.42
//
Query:       KHJ32484.1  [L=427]
Description: putative mitochondrial outer membrane protein mmm1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.5e-133  444.2   0.3   5.8e-131  436.5   0.3    2.1  1  MMM1      Maintenance of mitochondrial morphology protein 1


Domain annotation for each model (and alignments):
>> MMM1  Maintenance of mitochondrial morphology protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  436.5   0.3  3.2e-135  5.8e-131       1     331 [.      19     344 ..      19     345 .. 0.94

  Alignments for each domain:
  == domain 1  score: 436.5 bits;  conditional E-value: 3.2e-135
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXX.XXXXX-HHH........HHHHHHHHTTT--TTT CS
        MMM1   1 lsftqGllvGqlsvvllliifikffifgeasskeskasskaaerlssskkklssvikkkkkekeessedleekkssnvveessakiesiLektyYdves 99 
                 +sf+qGll+Gqls+v+l+ +fikffifg+ +s+e++as  aa+r++ s ++++s+++ +++++  ++  l++k+ss +++++  ++++iL+ktyY+v+s
  KHJ32484.1  19 YSFIQGLLLGQLSIVILIGAFIKFFIFGDPPSPETTASLYAAKRRAYSLNHKRSLLSVRSSAQYPRTPVLNKKRSSILRNPPPLTTNTILSKTYYHVNS 117
                 69**********************************999988887776677777777777777777777777777777********************* PP

                 S--B--HHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHGGCS-TTEEEEEEEEEE--S---EEEEEEE..................EE-TTTTSS-EE CS
        MMM1 100 hqpesLDWfnvLiaqtiaqfreealekdnilksLnealnseelpdyldkikvteidlGedfPifsncrii.................keskesekkrLe 181
                 hqpesLDWfnvLiaqtiaqfr++a+++d+il+sL+++ln +++pdyld+ikvte++lGe+fPifsncr+i                      +e +rL+
  KHJ32484.1 118 HQPESLDWFNVLIAQTIAQFRADAQHDDAILTSLTATLNGNSRPDYLDEIKVTELSLGEEFPIFSNCRVIpvdedgfslgnerelnkIVGGAKEPSRLQ 216
                 **********************************************************************************99986445667899*** PP

                 EEEEEEEEEEEEEEEEEEEEESSSSSSEE---EEEEEEEEEEEEEEEEEE...E--SSS-...-S--------...---S-EEEEEE-SS-EEEEEEEE CS
        MMM1 182 akidvdlsDtltlgietkLllnyPkpltavLPvalavsvvrfsgtLtvslipstkaeelvkeeeeeeeeeeeeeeeeeegtalvfsflpdyrldlsvks 280
                 a++dvdl+D +tl++etkLlln+Pkpl+avLPvalav++v+fsgtL++s++p++ +                      ++t+l+fsfl+dyrldls++s
  KHJ32484.1 217 ARMDVDLNDFITLAVETKLLLNFPKPLIAVLPVALAVTIVKFSGTLSISFVPGNPQ----------------------SATVLTFSFLDDYRLDLSIRS 293
                 **************************************************995444......................4578***************** PP

                 ESSSSTT-TTHHHHHHHHHHHHHHHHHHHHBTT-EEEEE----S--GGGEE CS
        MMM1 281 liGsrsklqdvPkiaslvearlkkWfeercvePrfqvvklPslWPrkkntr 331
                 l+Gs+s+lqd+Pkia+lve rlk+Wfeer+veP fq+++lPslWPrkkntr
  KHJ32484.1 294 LVGSKSRLQDMPKIAQLVERRLKTWFEERVVEPVFQQIELPSLWPRKKNTR 344
                 **************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.29s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3160.59
//
Query:       KHJ32485.1  [L=226]
Description: putative rrna-processing protein fcf2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-38  129.7   0.7    1.3e-37  128.1   0.7    1.9  1  Fcf2        Fcf2 pre-rRNA processing
     0.0039   17.5   0.5     0.0079   16.5   0.5    1.5  1  EntA_Immun  Enterocin A Immunity
  ------ inclusion threshold ------
       0.14   11.7   1.6       0.11   11.9   0.3    1.4  2  Inositol_P  Inositol monophosphatase family


Domain annotation for each model (and alignments):
>> Fcf2  Fcf2 pre-rRNA processing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.1   0.7   2.2e-41   1.3e-37       1      96 []     100     195 ..     100     195 .. 0.98

  Alignments for each domain:
  == domain 1  score: 128.1 bits;  conditional E-value: 2.2e-41
        Fcf2   1 kkktagkkWfnlpkteltpelkrdlqlLklrnvldpkrfyKkedkkkklPkyfqvGtivegetefysarltrkerkrtlveellkdeeakkyakrK 96 
                 kk+tag +W+nlp+t+ltpelkrdlqlL++r+vldpkr+yKk+++++++P+++qvGti+eg+te++s rl++k+rk+tlvee+l++e+++   k+K
  KHJ32485.1 100 KKATAGTDWYNLPRTRLTPELKRDLQLLRMRDVLDPKRHYKKDSSRTNVPEFSQVGTIIEGPTEYFSGRLSNKQRKKTLVEETLENENITGRYKKK 195
                 589****************************************88*********************************************999998 PP

>> EntA_Immun  Enterocin A Immunity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.5   1.3e-06    0.0079      16      60 ..       4      53 ..       1      61 [. 0.87

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.3e-06
  EntA_Immun 16 eikeneelrevLltaknklekgknvsv.....vasrLeqelrsyalknki 60
                e  ++++l+++L  a ++l k+++ ++     ++ +L q+++s+a++ ki
  KHJ32485.1  4 EDLSEPQLKQLLKDAEERLRKNEKIPQisendLVKNLQQNISSIAAATKI 53
                4556778*********************9999999999999999997766 PP

>> Inositol_P  Inositol monophosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   1.9e-05      0.11      16      93 ..      11      90 ..       2      91 .. 0.80
   2 ?   -3.1   0.0      0.74   4.4e+03      51      64 ..     185     198 ..     162     215 .. 0.51

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.9e-05
                HHHHHHHHTTTSEEEESTTTCCHHHHHHHHHHHHHHHHHHHH.HHHHS.TTSEEEHHCHHHHCC.CT.SSSSSEEEEEEEE CS
  Inositol_P 16 agevlreefsenelvieekskegeedlvtaadeaveelilea.laekf.pshkilgeetlakge.kseltedgltwivDPi 93
                + ++l+++++ +  ++e+  + +e+dlv+++++ ++++  ++ ++  +   h i   et + +  k+++++dg+ ++vDPi
  KHJ32485.1 11 LKQLLKDAEE-RLRKNEKIPQISENDLVKNLQQNISSIAAATkIEPYViGLHNIPNVETAHLIPkKDRIKSDGVRIVVDPI 90
                5667777775.444444444789***************9999766555588999999999999999**************9 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.74
                 HHHHHHHHHHHSTT CS
  Inositol_P  51 eelilealaekfps 64 
                 +e+i+ ++++k+++
  KHJ32485.1 185 NENITGRYKKKYNE 198
                 23333333444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       997  (0.0556082); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1618.99
//
Query:       KHJ32486.1  [L=68]
Description: hypothetical protein EV44_g6142 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-05   25.1   0.0    3.2e-05   24.5   0.0    1.3  1  dsrm             Double-stranded RNA binding motif
  ------ inclusion threshold ------
      0.019   15.2   3.4       0.09   13.0   3.4    2.1  1  DND1_DSRM        double strand RNA binding domain from DEAD E
       0.18   11.9   0.0       0.22   11.6   0.0    1.2  1  Inhibitor_Mig-6  EGFR receptor inhibitor Mig-6


Domain annotation for each model (and alignments):
>> dsrm  Double-stranded RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.0   5.4e-09   3.2e-05       2      67 .]       7      67 ..       6      67 .. 0.88

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 5.4e-09
                HHHHHHHHHHTTSEEEEEEEEEESSTSSSEEEEEEEEETTEEEEEEEES.SHHHHHHHHHHHHHHHH CS
        dsrm  2 KskLqeycqkkgkppnyeyvseegpphslpkFvvtvkvngklygsGvgs.nKKeAeqsAAedalekL 67
                K++Lq++c  +g+p++++      p     ++ ++++v +k++++++++ + +eAe  AA +a++ L
  KHJ32486.1  7 KTLLQKLCNARGWPLPTYDSYYSNP-----QYFCSLIV-NKRCYIASSQySEDEAEEEAASEAYRDL 67
                99****************9988888.....999*****.55555777777*************9987 PP

>> DND1_DSRM  double strand RNA binding domain from DEAD END PROTEIN 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   3.4   1.5e-05      0.09       4      25 ..       7      28 ..       4      68 .] 0.82

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.5e-05
   DND1_DSRM  4 vqlLeelCeknkwgsPvYelhs 25
                + lL++lC+ + w+ P Y  + 
  KHJ32486.1  7 KTLLQKLCNARGWPLPTYDSYY 28
                579***************8775 PP

>> Inhibitor_Mig-6  EGFR receptor inhibitor Mig-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   3.7e-05      0.22      25      50 ..      11      36 ..       3      43 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.7e-05
  Inhibitor_Mig-6 25 sylstspGKlmptthsFAsDPkYAap 50
                      +l   +G ++pt  s+ s+P+Y  +
       KHJ32486.1 11 QKLCNARGWPLPTYDSYYSNPQYFCS 36
                     578899*****************765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (68 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.35u 0.24s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 538.19
//
Query:       KHJ32487.1  [L=119]
Description: hypothetical protein EV44_g3968 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0028   17.8   0.2     0.0081   16.3   0.2    1.7  2  RNase_H   RNase H


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0     0.041   7.4e+02      21      51 ..      13      45 ..       8      56 .. 0.61
   2 !   16.3   0.2   4.5e-07    0.0081     110     133 ..      59      81 ..      19      89 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.041
                EEEEECTT..E..EEEEEECCCCHHHHHHHHHH CS
     RNase_H 21 agavlykegar..nisapleeaqtnnraELsAv 51
                 g+v y+ ++r   ++ + e+ ++ ++a + A+
  KHJ32487.1 13 QGFVGYHRQQRasDKALQHEQHKSSQKAHIDAL 45
                566554443442233333346788888887776 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 4.5e-07
                 CHCSSEEEEEE-SCCSSSTHHHHH CS
     RNase_H 110 lakkkkvqlkwvkgHaGvpkgNem 133
                 ++ + kv+++w+ gH+G++ gNe 
  KHJ32487.1  59 HITAGKVNIRWISGHSGIT-GNEL 81 
                 455899************5.**96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       465  (0.0259356); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 870.41
//
Query:       KHJ32488.1  [L=323]
Description: putative nap family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-24   86.0   0.5    1.4e-22   80.2   0.0    2.2  2  NAP       Nucleosome assembly protein (NAP)


Domain annotation for each model (and alignments):
>> NAP  Nucleosome assembly protein (NAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.9   0.2   0.00069        12      11      47 ..      13      49 ..       4      50 .. 0.91
   2 !   80.2   0.0   7.8e-27   1.4e-22      87     269 ..      50     281 ..      48     282 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.00069
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
         NAP 11 kelskleaefqeevlelekkyaalykplyekrseIin 47
                ++l+++e+ef++   e+ ++  +l +p+y +r+++i+
  KHJ32488.1 13 EDLAQIEQEFEDVEKEIIRQEITLSSPIYARRNALIS 49
                67899*****************************997 PP

  == domain 2  score: 80.2 bits;  conditional E-value: 7.8e-27
                 TSTTHHHHHHHTSH.HHHTT--HHHHHHH.TTEEEEEEEE-----..--EEEEEEEE-S-SSB--SEEEEEEEE----........----EEEEEE--- CS
         NAP  87 gipeFWltvlknve.llaeliqerDepiL.khLkdirveyllske..kegFtleFeFdeNpyFtnevLtktyilksevdkedpfiydgpeiekaegckI 181
                  ip+FW  v+++++  +++ iq++D   L   L+ ++v++++  e  +++  + FeF+eN+yF+n+vL+k++ ++    +  + ++ g     +e + I
  KHJ32488.1  50 KIPNFWPLVFEQAPpEIDQHIQMTDGALLlGALTSLSVTRFEP-EvdPRSVLIRFEFSENKYFENKVLEKKFWWR----TARNRSWCGL---VSEAVGI 140
                 7**********997257778*****998779********9654.457888*************************....3333444444...458899* PP

                 -B-T.T--TTS--.................--------...------------...................-GGGGS--B.......--------... CS
         NAP 182 dWke.gkdvtvkt.................vkkkqknkktketrtvtkkvpke...................SFFnfFspp.......kvpeeeee... 233
                 +Wk+ + d+t+ +                  ++ +k+k+   t +                           SFF +F          + +        
  KHJ32488.1 141 KWKSpEVDLTEGLldlvlaaessvatkppsDESARKDKS---TPI-------LtdaqkklqqciqdkginglSFFAWFGFVgnrisakE-S----Aeae 224
                 ***88*******988888877776555443222222232...222.......02222334566888899999*******5433333321.1....1223 PP

                 ......................-------HHHHHHHHHHHHHHHHHTHHHHHHHHHHT CS
         NAP 234 ......................eeeeeeeleelleadyeigealkdkiiPkAveyFtg 269
                                       +++++++le ++    e++ a+ ++++P A++yFt 
  KHJ32488.1 225 asrrnksavqstgadedinegfDDDDDDDLE-IFPDGGELAMAISEDLWPDAIKYFTQ 281
                 3455566677777778898887777677777.8999********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       887  (0.0494729); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2381.79
//
Query:       KHJ32489.1  [L=176]
Description: putative phosphatidylglycerol phosphatidylinositol transfer protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-18   67.6   0.0    1.8e-18   67.3   0.0    1.1  1  E1_DerP2_DerF2  ML domain
     0.0089   16.5   0.1      0.021   15.3   0.1    1.7  1  DUF1091         Protein of unknown function (DUF1091)
  ------ inclusion threshold ------
      0.075   13.4   0.0       0.11   12.9   0.0    1.3  1  TRP_N           ML-like domain


Domain annotation for each model (and alignments):
>> E1_DerP2_DerF2  ML domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.3   0.0     3e-22   1.8e-18       2     133 ..      50     175 ..      49     176 .] 0.93

  Alignments for each domain:
  == domain 1  score: 67.3 bits;  conditional E-value: 3e-22
                     -EEEES.STTTSSEEEEEEEEEESSECEECTSEEEEEEEEEECSSBBSSEEEEEEEEETTEEEEE-BSSEETCHHHHHHTTTT-SSSB-TCEEEE CS
  E1_DerP2_DerF2   2 vsfedC.gankddavtvksveisppcplkrgqnltisadgstsdeissglkaevevkvggwikvpfelpetddaCkvlelgegleCPikageyvt 95 
                     +sf++C +++  d+++++ v+++p+ ++k gq+l i+a g++ +e++  ++ +v+v++g  + v+f+++++  +C++++ +  ++CP+++g  ++
      KHJ32489.1  50 NSFDYCdQDYTSDILQLDYVNLNPK-EPKQGQTLLIEAAGNLLQEVNYDAYFRVKVSLG--LIVLFKMESY--LCDQIS-KVNMTCPLEKGPIMV 138
                     689***868999***********99.********************************7..7899998887..****96.55679******9955 PP

                     EEEEEES-CCCHSCEEEEEEEEEECTTEEEEEEEEEEE CS
  E1_DerP2_DerF2  96 ytlslplpselpngkyrvelelldedgkeltCvkidvs 133
                      +++++lp  +p+g+y +++++ ++++++l C++ +++
      KHJ32489.1 139 -KKEVKLPLVIPPGHYMLTADAFTDENERLLCLTTKIK 175
                     .********************************99987 PP

>> DUF1091  Protein of unknown function (DUF1091)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   3.6e-06     0.021      45      83 .]     121     155 ..     110     155 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.6e-06
     DUF1091  45 kysnlnhtCPypkgdyilknlrldekllPsflpeGeYkl 83 
                 + s++n tCP++kg +++k+    e +lP ++p G+Y+l
  KHJ32489.1 121 QISKVNMTCPLEKGPIMVKK----EVKLPLVIPPGHYML 155
                 67999**************8....8899*99******97 PP

>> TRP_N  ML-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.8e-05      0.11       4      89 ..      50     142 ..      48     157 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.8e-05
       TRP_N   4 ssfenClens...qftaskfdvtftpdnk..tvvfnvtgt..ssienkavtlelkveaygyevvnetvdpCdan..vkglCPlgpgfkinasgvl 89 
                 +sf+ C ++     ++ ++++   +++++  t+ ++ +g   + + n+   + +kv+   +  ++++  +Cd+   v+ +CPl++g +i +++++
  KHJ32489.1  50 NSFDYCDQDYtsdILQLDYVNLNPKEPKQgqTLLIEAAGNllQ-EVNYDAYFRVKVSLGLIVLFKMESYLCDQIskVNMTCPLEKG-PIMVKKEV 142
                 6888894442123666777777765555556888888887433.33444667777777777778********9999**********.99888655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       274  (0.0152825); expected 358.6 (0.02)
Passed bias filter:                      251  (0.0139997); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1254.59
//
Query:       KHJ32490.1  [L=82]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       258  (0.0143901); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.42
# Mc/sec: 583.10
//
Query:       KHJ32491.1  [L=149]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       580  (0.0323498); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1142.43
//
Query:       KHJ32492.1  [L=110]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       773  (0.0431145); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 877.36
//
Query:       KHJ32493.1  [L=232]
Description: putative peptidyl-prolyl cis-trans isomerase nima-interacting 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-22   79.3   0.0    4.4e-22   78.8   0.0    1.2  1  Rotamase    PPIC-type PPIASE domain
    1.8e-14   54.3   0.0    2.6e-14   53.8   0.0    1.2  1  Rotamase_3  PPIC-type PPIASE domain
    2.3e-05   24.3   1.1    2.3e-05   24.3   1.1    1.7  2  WW          WW domain
    0.00041   21.2   0.0    0.00061   20.6   0.0    1.2  1  Rotamase_2  PPIC-type PPIASE domain


Domain annotation for each model (and alignments):
>> Rotamase  PPIC-type PPIASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   0.0   9.8e-26   4.4e-22       1      96 [.     128     231 ..     128     232 .] 0.98

  Alignments for each domain:
  == domain 1  score: 78.8 bits;  conditional E-value: 9.8e-26
                 EEEESSCCS.........E----HHHHHHHHHHHHCCTCCCHHHHHHHHCCC-.-CHHHCCTTEEECEETTTS-CCCHHHHCCS-CT-B-S-EEETTEE CS
    Rotamase   1 HILlkvkek.........asekeraeakakaeeileqlksgedtFeelArkySddknsakngGdlgwvekgqlppefekaafslkkGeisepvetkfGf 90 
                 H+L+k+ ++         ++++++++a + + +  e+++ g +t+ elA   S d+nsak++Gdlg++ +g++++efe+aaf+lk Ge+s+++et+ G+
  KHJ32493.1 128 HLLVKHRDSrrpsswreaEITRSKEDALNIMLAHEERIRCGVKTLGELAMTES-DCNSAKKQGDLGFFGRGDMQKEFEDAAFELKVGEMSQIIETASGL 225
                 9999999999999999999**********************************.********************************************* PP

                 EEEEEE CS
    Rotamase  91 hiikle 96 
                 h+i+++
  KHJ32493.1 226 HLIQRI 231
                 ***986 PP

>> Rotamase_3  PPIC-type PPIASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.8   0.0   5.8e-18   2.6e-14      15     111 ..     123     229 ..     114     232 .] 0.82

  Alignments for each domain:
  == domain 1  score: 53.8 bits;  conditional E-value: 5.8e-18
  Rotamase_3  15 svkvshIlistkg..........kesrseeeakakadsllaalk.egadFaalAkeySdDpaskenGGelgwftkgqmvkeFedavfslkkgeiskvvk 102
                 ++++ h+l++  +          + +rs+e+a + +    ++++   +   +lA++ Sd   s+++ G+lg+f +g+m+keFeda+f+lk+ge+s++++
  KHJ32493.1 123 KIRAIHLLVKHRDsrrpsswreaEITRSKEDALNIMLAHEERIRcGVKTLGELAMTESDC-NSAKKQGDLGFFGRGDMQKEFEDAAFELKVGEMSQIIE 220
                 677778888877788876666666667777777777777788887778899******995.569999******************************** PP

  Rotamase_3 103 tdfGyHiik 111
                 t+ G H+i+
  KHJ32493.1 221 TASGLHLIQ 229
                 ********8 PP

>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   1.1   5.2e-09   2.3e-05       1      31 []      52      82 ..      52      82 .. 0.98
   2 ?   -3.0   0.0       1.8   8.1e+03       2       8 ..     139     145 ..     139     149 .. 0.80

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 5.2e-09
                X-TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW  1 LPpGWeeqwdpdsGrvYYyNheTgetqWekP 31
                LP GWe + + + + +YY+ ++ +++ We+P
  KHJ32493.1 52 LPYGWEVRHSNSKNLPYYFSESLKQSRWEPP 82
                8*******99999*****************9 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.8
                 -TTEEEE CS
          WW   2 PpGWeeq 8  
                 P+ W+e+
  KHJ32493.1 139 PSSWREA 145
                 8889886 PP

>> Rotamase_2  PPIC-type PPIASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   1.4e-07   0.00061      60     105 ..     186     230 ..     170     232 .] 0.83

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 1.4e-07
  Rotamase_2  60 kkaadlgifesasnlpeelakaafalkpgevsgpvetdngyyivkv 105
                 kk++dlg+f    ++ +e+++aaf+lk+ge s ++et+ g ++++ 
  KHJ32493.1 186 KKQGDLGFFGR-GDMQKEFEDAAFELKVGEMSQIIETASGLHLIQR 230
                 56777777765.55999************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       271  (0.0151152); expected 358.6 (0.02)
Passed bias filter:                      262  (0.0146132); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1703.60
//
Query:       KHJ32494.1  [L=442]
Description: hypothetical protein EV44_g2898 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 3210.00
//
Query:       KHJ32495.1  [L=1445]
Description: putative hypercellular protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
          0 1306.8   2.8          0 1306.5   2.8    1.0  1  TRAPPC9-Trs120  Transport protein Trs120 or TRAPPC9, TRAPP II


Domain annotation for each model (and alignments):
>> TRAPPC9-Trs120  Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ! 1306.5   2.8         0         0       2    1226 .]       5    1369 ..       4    1369 .. 0.93

  Alignments for each domain:
  == domain 1  score: 1306.5 bits;  conditional E-value: 0
  TRAPPC9-Trs120    2 lsfiaParvrvLlvPigkikrsrFlsfverlraenevrLlDvtpdsrpnrnmFsPlafpnGrilydlstsvpdeehlfLedFEpfRktfvvig 94  
                      +s+ aParvrv+l Pigkikr rF+s+verl++e+ vrL+D++pd+rp  nmFsPlafp G+i+ydl+t +p+ + ++L++FE+ R++ v+ig
      KHJ32495.1    5 FSPAAPARVRVVLFPIGKIKRLRFASYVERLQQEHIVRLGDISPDGRPHLNMFSPLAFPVGMIVYDLTTFYPSYSCIALSPFELNREPIVIIG 97  
                      89******************************************************************************************* PP

  TRAPPC9-Trs120   95 iadgse......................ekdledleqeleelkekypkalvhnlivfdtp.ee.kaalpeevilvpsseesksttlktimcDi 163 
                      iad++e                      +   ++l ++++ lke+y ka++h++++fd+  ++ +++lpe++i+vp+ e++k+ttlktimcDi
      KHJ32495.1   98 IADAAEieqtacdgtnppdgneiqyermNLFINELDEDFKCLKERYYKAILHRILLFDYVsQRpAVNLPEDIITVPPLEKCKRTTLKTIMCDI 190 
                      *************************99888899***************************5554555************************** PP

  TRAPPC9-Trs120  164 tsnlLaeldslaksyqaiptlrS.....Pg..............sitgssvlkktlqkesrssss.................dkaqkRlsmpv 220 
                      +s+lLa+++ la+s+q+ ++l+S     Pg              ++ +ss                                d++++R +mp+
      KHJ32495.1  191 SSRLLADMTILANSIQESKSLESinslrPGqdisfttlnkdqrsDVRSSS--------------DekktagssgensalrflDRSHSRSTMPI 269 
                      ***********************544444455544444333333222222..............1222233444555677889*********9 PP

  TRAPPC9-Trs120  221 ........................................asgssstpttfdeisrs....................vaglgsssasersrqr 253 
                                                              +        ++++   +                    + g+gs+s +e++ + 
      KHJ32495.1  270 frkdsrpssasgrprlpinyrpssshnilegnshtsqenpQ--------STQR---MvmnrfhstsatmdknldknlILGFGSGSFNEHTINV 351 
                      99999999999999999999988888888776433333331........3333...1334677777777778877888899************ PP

  TRAPPC9-Trs120  254 gkGRqskllGnlyLlAGrypdALkefteaatlakklsDylWlgsALEgilvcllLlaylgvdfqipssicqpskdklsslkss...ssesssr 343 
                       k+R ++++G+ly+lAGr++dA+ke te+a++ak++  +lW++ ALE+ilv++l+la+ g++fqip ++c++s++k++s+++s   +  ++sr
      KHJ32495.1  352 EKCRKNIMIGSLYMLAGRWTDAIKEMTEGAIIAKNVLYHLWHARALENILVSVLMLAWCGLNFQIP-QVCYTSAEKAHSAQTSqdgKLPTQSR 443 
                      ******************************************************************.**********99988899999999** PP

  TRAPPC9-Trs120  344 rksleslpellkellekilslYerslndteesvPqlvysesvlRllkllvavhlrggslndealehiVkgkasepleekeskekprlavlfsk 436 
                       +sl++l++ l+e+le+ils+Y+++ ++ ++++Pq++ysesv+R++kll+a+hl+gg++nd++l+  V+g    pl+ +++ + pr  + +++
      KHJ32495.1  444 MTSLQQLNTHLPEILENILSIYSLAIKKLGQAMPQIPYSESVIRFSKLLTAIHLNGGYINDDVLKLAVLG---VPLQMTPNVSIPRVFIRPTR 533 
                      **********************************************************************...9998999************* PP

  TRAPPC9-Trs120  437 seIasllfkafplql.kdlslvdqirIlsglAsvlssLgleRKkAfvlrellvslipgleqarkvgaaevgihpaAg...............a 513 
                      seI+++lf+afpl + ++l++v+ + I+s++As+l sLg++RK+A+v+rel++ li+gl++ar++g  e   hp +                a
      KHJ32495.1  534 SEIVAVLFQAFPLASpEKLPTVEMTIIFSTIASILTSLGYRRKRALVIRELVSHLIQGLVRARIKGVTERNTHPLSAlvnpnltsengnrtpA 626 
                      *************999**********************************************************55557788888899999** PP

  TRAPPC9-Trs120  514 ldlgegdqeesirellellleiYgik................eaeveriledaslrsfgwlsLqievLrlcinisealpDfegvlkftvllLt 590 
                      ldl++gd e +i++ll++l+++Yg+                 e++  ril+ as+r fg++ L+i+vLr+cin+se+lpD++++l+ft++lL+
      KHJ32495.1  627 LDLNPGDSEFGIDKLLDSLVQSYGVVsssitrsqegviddsnEEIAFRILQYASIRAFGNYRLKIDVLRSCINLSEELPDCHCLLRFTADLLR 719 
                      *****************************************989999********************************************** PP

  TRAPPC9-Trs120  591 rys.............hllpkdeQvrLleniertvaaakklglkel.aeYWDpfLvrgvklleeseskipieeskselkkatkeeeksekdpf 669 
                      +++             ++++++eQ rL++ni+rt++ a++lg+++l +eYWD+fLvrgv+l+++ +sk+p+ +++sel++a+ ++++ +++pf
      KHJ32495.1  720 TVGsgvapgprsqnasPSMSREEQLRLASNISRTLTVASNLGISNLeTEYWDEFLVRGVELEPTLSSKRPVLHNHSELPGARIDKNSVARNPF 812 
                      *************************************************************************************999***** PP

  TRAPPC9-Trs120  670 iynPFkkkkkastkakekllvadEkaefkvtLqNPfefeveiesieletegvefealkeslvigpkstqkltltgkptesgelkitgckikvl 762 
                      iynPF++  + +++a  +llva+E+a+fkvtLqNPfefeve+e++ele egv+fe+  ++l+igp++tq+l++ g p++ g+lkitgc+ikv+
      KHJ32495.1  813 IYNPFSR--EGNNAAVYELLVAGETASFKVTLQNPFEFEVEVENLELEYEGVDFESAAQKLIIGPYRTQTLSIFGIPRSPGQLKITGCEIKVR 903 
                      *******..666666689*************************************************************************** PP

  TRAPPC9-Trs120  763 gcrereFpifkkekwkpkkekkikrtglaakekkserr...........petkslslkVipeQPelelkstsltqsavMlLeGekktfsitLe 844 
                      gcr+r+Fpif+++ w+p+ ++k++r+g++++  ++++r           p+++ l l+Vi++QP + +k+t+l qs++ +LeGe++ fsitL+
      KHJ32495.1  904 GCRKRHFPIFEDP-WSPQPQVKVSRIGVSSVFDSKQSRnnlkitnnsspPKPNALILNVIKKQPIVIVKNTTLIQSSLSILEGETRVFSITLQ 995 
                      *************.*************9666555555556667777777******************************************** PP

  TRAPPC9-Trs120  845 NkS.stavdflsfsfqDstienlqkalknkelsaaelYelElqllkkkalrilnkdeekktikPgeeatfeievlgkkglteatiqidYaylg 936 
                      N S +++vd+l+fsf+Dst  +lq+ lkn++  aae Ye+El+l++k+alr+++kd+e  +i  g + t++iev+gk+glt+a + idYaylg
      KHJ32495.1  996 NLSsEIPVDLLLFSFSDSTEGPLQEVLKNRDSAAAEQYECELNLAHKQALRLKKKDNEISSITSGSTETLDIEVFGKPGLTNAVVRIDYAYLG 1088
                      ***9***************************************************************************************** PP

  TRAPPC9-Trs120  937 kksseesekfytrqlsipltvtVnasielvrcdilplsessksasadkqlsellseeskkekdsdycLlllDlrNsWpnplsvsleveeksed 1029
                       ++ +++e+fytrql +plt+tV  s++l ++d++pls+  ++ ++  +  + + +e+   +++dy Ll lDlrN+W+++l v+l+v+    +
      KHJ32495.1 1089 IPTPDVAENFYTRQLILPLTITVSTSVQLENIDVFPLSG--RIPRSIWTRAKIMVDENVLVESDDYFLLQLDLRNAWSDQLAVHLNVK----N 1175
                      ***************************************..566666666666777788889*************************7....9 PP

  TRAPPC9-Trs120 1030 efeveetiepgktsRlilpikrislkeedlhkpIPsLn..rnrQFVvsaskiseeeeramreaFWyReelLkrlkgtWke.ssskreGeidlR 1119
                         +e++i +g t+R+++pikri++  ++  +pIPsL+  r+rQFVvs++k+s+e+e+++re FWyReelLk ++g+W+  +++++ G+idlR
      KHJ32495.1 1176 GGLIEKKIPSGVTKRFVFPIKRIFI--KNTLAPIPSLDptRQRQFVVSTNKLSDENEKNKREIFWYREELLKLIQGHWSYkTNTRKYGSIDLR 1266
                      99***********************..89***************************************************8888999****** PP

  TRAPPC9-Trs120 1120 sirltsrmvdalkledieievslekeeeeqtgrskfkvktdefltlkvtitnrsskpispilrllPsl.nqpanvaldlsrrllinGvlqqal 1211
                      si+ltsrmv+a+++e+i+i++s+ ++ ++     k +++td+f +lkv+i+n++sk+ispilrl Ps  nqp++ aldl +rl++nG+ qq+l
      KHJ32495.1 1267 SIKLTSRMVEAVRVEEISIQLSIGSQRGT-----KVELSTDNFTELKVKIVNKTSKSISPILRLVPSIrNQPQHLALDLGKRLVVNGLTQQSL 1354
                      ************************99987.....9********************************************************** PP

  TRAPPC9-Trs120 1212 pvlepgestevelgl 1226
                      p l ++++te+++g+
      KHJ32495.1 1355 PTLLGTSNTEISFGI 1369
                      ***999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.86u 0.30s 00:00:01.15 Elapsed: 00:00:00.51
# Mc/sec: 8462.29
//
Query:       KHJ32496.1  [L=356]
Description: putative short chain dehydrogenase reductase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.1e-17   61.1   0.0    1.5e-16   60.4   0.0    1.3  1  adh_short     short chain dehydrogenase
    1.9e-13   50.6   0.0    2.8e-13   50.0   0.0    1.2  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
  ------ inclusion threshold ------
      0.073   13.0   0.0       0.16   11.9   0.0    1.7  1  KR            KR domain


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.4   0.0   2.6e-20   1.5e-16      47     178 ..      80     218 ..      61     221 .. 0.88

  Alignments for each domain:
  == domain 1  score: 60.4 bits;  conditional E-value: 2.6e-20
                 T..TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGCSHHH.HHHH....HHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGG CS
   adh_short  47 e..gakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfselseee.werv....ievNltgvflltravlpamlkqssGrIvnvsSva 138
                 +  ++++  i++  +  +++ a+v++ v+ +g++d+L  +++    g+++el  ++ ++++    +e  + + ++ ++a+lp++ k+++G+I   sS+ 
  KHJ32496.1  80 QgwKDRFRGIRCEARAISQCGAAVAETVQAFGHIDILLCCTSEGVLGTVEELALNQaTKSLaqdqFESTFYSNVNYIKAALPHFRKKNNGHIMILSSIC 178
                 244778999****************************999999888888888877744444666699999999************************** PP

                 GTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE CS
   adh_short 139 gkvpvagvaaYsAsKaavagltrslakelaptgirvnava 178
                 g+ +++g ++++A+  a++g+ +sla e+ap +++ ++v+
  KHJ32496.1 179 GHLGSPGISMFCAATRALEGYCDSLAYEIAPFNVKLTIVQ 218
                 ***********************************99987 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.0   4.8e-17   2.8e-13      41     169 ..      82     217 ..      60     240 .. 0.85

  Alignments for each domain:
  == domain 1  score: 50.0 bits;  conditional E-value: 4.8e-17
                   TTSEE..EE--TTSHHHHHHHHHHHHHHHSSEEEEEE--..---EG.CSS-GGGH-HHHHHHHHHHHTHHHHHHHHHHHHHCTSC..CEEEEEEEGG CS
  adh_short_C2  41 lgaev..lecDVtdeeqvealveevvekfgklDilvnna..giapk.lkgpfletsreefdraldvnlyslfllakaalplmkeg..gsivnlssvg 130
                    + ++  ++c ++  +q+ a+v+e+v+ fg++Dil+ +   g+  +  +  + +++++  ++ ++  +ys ++ +kaalp+++++  g i+ lss++
    KHJ32496.1  82 WKDRFrgIRCEARAISQCGAAVAETVQAFGHIDILLCCTseGVLGTvEELALNQATKSLAQDQFESTFYSNVNYIKAALPHFRKKnnGHIMILSSIC 178
                   334455699**************************987633777775555666679999999******************7776668********** PP

                   GTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE CS
  adh_short_C2 131 aervvpnynaygaaKaalealtrylAvelgpkgiRvNav 169
                   ++ + p+ ++ +aa  ale+ + +lA+e++p +++   v
    KHJ32496.1 179 GHLGSPGISMFCAATRALEGYCDSLAYEIAPFNVKLTIV 217
                   *******************************99987655 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.6e-05      0.16      96     162 ..     136     202 ..      73     231 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.6e-05
                 -TTT--HHHHHHHHTTTTHHHHHHHHHTTTS--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHH CS
          KR  96 lleemtaedleqvlapKvkGawnLhelledesldffvlfSSiagllgsagqanYaaaNaflDalaey 162
                 + +++ ++++e+ + + v+ ++     +++++  +++++SSi g lgs+g + + aa   l++++++
  KHJ32496.1 136 ATKSLAQDQFESTFYSNVNYIKAALPHFRKKNNGHIMILSSICGHLGSPGISMFCAATRALEGYCDS 202
                 556677788888888888888877788899999**************************99998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2579.60
//
Query:       KHJ32497.1  [L=829]
Description: putative gtpase-activating protein gyp7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.3e-38  130.6   4.9    1.5e-37  129.3   4.1    2.2  2  RabGAP-TBC     Rab-GTPase-TBC domain
     0.0011   18.4   0.0       0.11   11.9   0.0    2.7  1  PH_RBD         Rab-binding domain (RBD)
  ------ inclusion threshold ------
       0.02   14.4   0.1      0.051   13.1   0.1    1.7  1  Peptidase_M60  Peptidase M60, enhancin and enhancin-like


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.41   2.4e+03     116     154 ..      38      74 ..      37     101 .. 0.82
   2 !  129.3   4.1   2.6e-41   1.5e-37       3     215 .]     445     690 ..     443     690 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.41
  RabGAP-TBC 116 sLlekyklrdlytsslpglkrklkvleellkkkdpklyk 154
                 +Ll  y+ +++y + +p +k  ++    ll++++p+ +k
  KHJ32497.1  38 RLL--YSKSKVYLHPTPSIKDNIHGYIALLQRYLPQNSK 74 
                 677..7788999999999999999999999999998766 PP

  == domain 2  score: 129.3 bits;  conditional E-value: 2.6e-41
  RabGAP-TBC   3 lRgevWklllgyep....................evkrlkksekkqeksekeksklekseeskelsqIkkDvprtfp...........es......esf 64 
                 +R+e+W +llg+ +                    + k +  +   ++++e ++ ++++++     s+I+kDv+rt +           +       ++ 
  KHJ32497.1 445 VRKEAWLFLLGVFSwdstakerkqkiselrdeylRLKGAWWNRLANQVDEGKELEWWYDQ----RSRIEKDVHRTDRtiplfmgedtpHPdpsssfAEV 539
                 799999999999999999999999998777744433333334444444444444444444....789*******9999999999877622555455566 PP

  RabGAP-TBC  65 knkqgqnqLeriLkaysiynpevgYcqGmndivaplllvsldeeeaFwcfvsLlekyklrdlytsslpglkrklkvleellkkkdpklykhlkeegldl 163
                  ++   +qL+  L++y+ yn e+gY+qGm+d++ap+++v++d   aFw+f +++   +++ ++  +++g++++l  le+l++  dpkly hl++ ++ +
  KHJ32497.1 540 GTNVHLEQLKDMLLTYNEYNRELGYVQGMSDLLAPIYAVMQDDAVAFWAFKNFM--LRMERNFLRDQSGMRKQLLALENLVQLMDPKLYLHLQSADCIN 636
                 677999************************************************..******************************************* PP

  RabGAP-TBC 164 elfaikwfltlflrefpletvlrlwD.lll.ege.kfvllrvalailklleeell 215
                  +f ++ +l +f+ref++e+vl lw+ l+  +   ++++++va ail+++++ ++
  KHJ32497.1 637 FFFFFRMLLVWFKREFSWENVLSLWErLWTdF-LtSNFHIFVAFAILEKHRDVIM 690
                 **************************555542.25667************99886 PP

>> PH_RBD  Rab-binding domain (RBD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   1.9e-05      0.11       1     123 [.      38     184 ..      38     195 .. 0.52

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.9e-05
      PH_RBD   1 rllfeKnnVflets.dqdslikGvislvekksdvilkWiPnqlmkkkdqpssasskseelfdpdyepdwavistv........................ 74 
                 rll++K  V+l++  ++++ i+G+i l ++       + P+  + ++++p s+s    e         w   + +                        
  KHJ32497.1  38 RLLYSKSKVYLHPTpSIKDNIHGYIALLQR-------YLPQNSKANSSDPASQSYLGAE----SFLLAWIPETSLgdalktynkvesdeddsspkkppc 125
                 79**********876999********9874.......3343333333333333333333....111111111111222222233333333333333333 PP

      PH_RBD  75 .........esddrskwaitvslkelksirkskpgless..ylilvtkdGvslpplhFeq 123
                          + +   +  + v +k + si    p  ++    li+ +++G  +p+l+F+ 
  KHJ32497.1 126 vplppvidhP-SLVRQDGFAVPIKSIYSIFTRLPSPGWWfgSLIINSRAGDPFPALFFHD 184
                 3444333422.2222334666666777766555555554347777777777777777775 PP

>> Peptidase_M60  Peptidase M60, enhancin and enhancin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   8.5e-06     0.051      16      73 ..     652     708 ..     636     731 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 8.5e-06
  Peptidase_M60  16 eeWketlenskapvaelvgkrviltvpteslkklsevdveellklydrvvelvnevag 73 
                     +W++ l+  +  ++++ ++++++ v+ + l k+++v  +e lk++d+v++ vne++ 
     KHJ32497.1 652 FSWENVLSLWERLWTDFLTSNFHIFVAFAILEKHRDV-IMEHLKHFDEVLKYVNELST 708
                    58**********************************8.*****************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (829 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       805  (0.0448993); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.27s 00:00:00.99 Elapsed: 00:00:00.46
# Mc/sec: 5409.08
//
Query:       KHJ32498.1  [L=416]
Description: putative calcium calmodulin-dependent protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.8e-71  238.5   0.0      1e-70  238.2   0.0    1.1  1  Pkinase         Protein kinase domain
    7.5e-29  100.8   0.0      1e-28  100.4   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    1.9e-07   30.7   0.0    2.9e-07   30.1   0.0    1.2  1  Kinase-like     Kinase-like
    0.00033   19.6   0.0    0.00059   18.7   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase
     0.0011   18.4   0.0      0.002   17.5   0.0    1.4  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0052   16.7   0.0     0.0081   16.1   0.0    1.2  1  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  238.2   0.0   3.4e-74     1e-70       1     264 []      20     281 ..      20     281 .. 0.92

  Alignments for each domain:
  == domain 1  score: 238.2 bits;  conditional E-value: 3.4e-74
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS..CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--H CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk..hpnivrlyevfeekdelylvleyveggeladllerkgslse 97 
                 y++ ++lG+Gs++ V ++v+ +tg+ +A K+i+k+ ++ +++  v++Ei+ilk ++  h+n+++l+++fe++++lyl+++++ ggel+d+++rkgs+ e
  KHJ32498.1  20 YKTGKTLGSGSYSIVKECVHIKTGRFYAAKVINKRLMTGREH-MVRNEIAILKCVSmgHQNVLTLVDFFETPNNLYLITDLAVGGELFDRITRKGSYFE 117
                 78899*********************************9887.9**********9999***************************************** PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTE...EEE-SGTTSEESSSSCS..BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHH CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLidekge...lKitDFGlakelesssk..ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyell 191
                 ++a ++++ +l++++ylH++gi+HrDlKpeN+L+ + +e   l i+DFGl++ +++++   lt+ +gt+ Y+APE+ ++++++k+vD+W++Gv+ y ll
  KHJ32498.1 118 ADAVELIRATLSAVSYLHDHGIVHRDLKPENLLFRTPEEnadLLIADFGLSRIINEEKYhtLTTTCGTPGYMAPEIFTKTGHGKPVDMWAIGVMTYFLL 216
                 **********************************94333367*************998789************************************** PP

                 HSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 192 tgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 +g  pf  e++ e+++++l          + + + ++ ++++s +a++++k++l  d +kR+ta+e+l+hp++
  KHJ32498.1 217 CGYAPFDRETNLEEMQAILAA--------EYSFLPIAYWRNVSLDARQFIKSCLIADSTKRITAHEALSHPFI 281
                 *******44444433333333........355678999*********************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.4   0.0   3.4e-32     1e-28       2     254 ..      21     274 ..      20     278 .. 0.87

  Alignments for each domain:
  == domain 1  score: 100.4 bits;  conditional E-value: 3.4e-32
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS..-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl..khpnivkllgvctkeepllivteyvkgGdLlkfLrkkek 97 
                  ++gk+lG+G+++ V e+       k+    a K+++++ +  +++++ +e++i+k +   h+n++ l+ +    ++l+++t+++ gG+L + +++k  
   KHJ32498.1  21 KTGKTLGSGSYSIVKECVHI----KTGRFYAAKVINKRLMTGREHMVRNEIAILKCVsmGHQNVLTLVDFFETPNNLYLITDLAVGGELFDRITRK-- 112
                  5789*************999....6666777788888888887889999*****987668***********************************8.. PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE...TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse...nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfG 192
                   +    d ++++    ++++yL+++ +vHrdl   N L ++   n    i+DfGL+r i ++++y++ +++     +mapE+++++   +  D+W+ G
   KHJ32498.1 113 GSYFEADAVELIRATLSAVSYLHDHGIVHRDLKPENLLFRTpeeNADLLIADFGLSRII-NEEKYHTLTTTCGTPGYMAPEIFTKTGHGKPVDMWAIG 209
                  78888999*******************************865558899*********99.7777777777777889********************** PP

                  HHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEE...S-BBTTSBHHHHHHHHHHT-SSGGGS--HHH CS
  Pkinase_Tyr 193 vllwEiftlgespypglkneevlekl.kegkr...lekpekcpeelyelmkkcweedpeeRptfse 254
                  v+++ +++ g  p+ + +n e ++++  +++    ++  ++++ +  +++k+c+ +d ++R t +e
   KHJ32498.1 210 VMTYFLLC-GYAPFDRETNLEEMQAIlAAEYSflpIAYWRNVSLDARQFIKSCLIADSTKRITAHE 274
                  ****9999.*****9997766666664777763334555677788899*************98766 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.0   9.7e-11   2.9e-07     136     257 ..     115     229 ..      79     257 .. 0.79

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 9.7e-11
  Kinase-like 136 ethkkletiarlllTlqlirlaanLqakglvhgkftvdnlll...dekgglmlggf..taLvragtkvvlseve..kgfaPpEllgsrggytrknktk 226
                   +++  +++ r+ l +     + +L+++g+vh +++++nll+   +e+  l + +f  + ++   ++  l +++   g+  pE++ + g         
   KHJ32498.1 115 YFEADAVELIRATLSA-----VSYLHDHGIVHRDLKPENLLFrtpEENADLLIADFglSRIINEEKYHTLTTTCgtPGYMAPEIFTKTG--------- 198
                  4455555555555544.....89*******************44447899***9983346778888888888888889******99944......... PP

  Kinase-like 227 mthkldaWqlGlviyriwclklPltlateea 257
                     ++d W++G+  y++ c ++P++  t++ 
   KHJ32498.1 199 HGKPVDMWAIGVMTYFLLCGYAPFDRETNLE 229
                  4669*********************998764 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0     2e-07   0.00059     312     391 ..     124     199 ..     114     206 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 2e-07
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeH 391
                     +r  + +   L+ + gi+HrD   +N+l+  ++  ++   l++D+ l   +++++ +    +  GT+ +ma e+  ++ H
      KHJ32498.1 124 IRATLSAVSYLH-DHGIVHRDLKPENLLFRTPE--ENADLLIADFGLSRIINEEKYH-TLTTTCGTPGYMAPEIFTKTGH 199
                     555566667899.*****************554..45788999********985444.56899***********998888 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   6.6e-07     0.002     120     169 ..     120     168 ..      94     177 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 6.6e-07
         Kdo 120 krallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldka 169
                   +l++a+  +++ lh+ g+ H+dl + n+l+++ e e+a + + D+  +
  KHJ32498.1 120 AVELIRATLSAVSYLHDHGIVHRDLKPENLLFRTPE-ENADLLIADFGLS 168
                 5567788888999**********************8.9999999999655 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   2.7e-06    0.0081     153     198 ..     124     170 ..      92     172 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2.7e-06
                 HHHHHHH--S...SS-EEEE-SS-SGGGEEEC.....TTEEEEE---TT-EE CS
         APH 153 laalaallpg...elptvllHgDlhpgNllvd...pddgrvtGviDfedagl 198
                 ++a +    +     +++++H+Dl+p Nll++   ++ + +  + Df+++++
  KHJ32498.1 124 IRATLS---AvsyLHDHGIVHRDLKPENLLFRtpeENADLL--IADFGLSRI 170
                 333333...34447899***************954444444..888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2941.89
//
Query:       KHJ32499.1  [L=558]
Description: putative aspartate-trna ligase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-64  217.2   0.0    3.5e-64  216.8   0.0    1.1  1  tRNA-synt_2      tRNA synthetases class II (D, K and N)
    4.2e-06   26.7   0.0    7.7e-06   25.8   0.0    1.5  1  tRNA_anti-codon  OB-fold nucleic acid binding domain
  ------ inclusion threshold ------
       0.11   12.4   1.8        7.4    6.4   1.4    2.4  2  SCAB_CC          Coiled-coil regions of plant-specific actin-
       0.22   10.4   6.2       0.31    9.9   6.2    1.1  1  NARP1            NMDA receptor-regulated protein 1


Domain annotation for each model (and alignments):
>> tRNA-synt_2  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.8   0.0   7.9e-68   3.5e-64       4     313 ..     226     552 ..     223     553 .. 0.92

  Alignments for each domain:
  == domain 1  score: 216.8 bits;  conditional E-value: 7.9e-68
                  HHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHTT-EE----SEESS--SSSS--EEEEETTT.TEEE-E-S-SHHHHHHHHHCTHSEEEEEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2   4 lrlknryldlrtekvskvlrlrstvtkavrkyleengfieietPiLsksdteegarlFkvksrekekeffaLtqspqlylellivagidrvfqiaraF 101
                  ++l+n  ++ r +  +++  +r  v +++ +yl  + f  +++P L+ +++e+ga+ F ++  ek  e + L+qspq+y+++ i++g +rvf+++++F
   KHJ32499.1 226 THLNNPAMHKRAPVSQAIADIRIAVEDLFCEYLRARRFKRFHPPSLIGAASEGGANVFRLPYFEK--EAY-LAQSPQFYKQFEIAGGRKRVFCVSPVF 320
                  789999******************************************************88877..677.*************************** PP

                  --S--BTTB-S-CEEEEEEEEET-SCHH.HHHHHHHHHHHHHHHHHHCSCCCCCHTTTTTS.......EE-SSS-EEEEHHHHHHHHHTS........ CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxx........ RF
  tRNA-synt_2 102 RaEdsrtdrhlaEFtqieaemsfieeed.imqvleelikslvkevlessakdiefvirrns.......kdlkkpfkrltykeaieklnei........ 183
                  RaE+s+t rhl+EFt +++em++ e+ + i+++le+++ +++ke+ ++ +++ie v +          +  + +  rlt++e    l+ +        
   KHJ32499.1 321 RAENSNTPRHLTEFTGLDLEMEIEEHYHeILEILEGVFLHIFKELSTRYREEIELVRSIYPseelllpE--PGKEVRLTFAEGQALLRAEgpeefrnv 416
                  ***********************998888****************999999998888776566655321..223459999999999998899999999 PP

                  ..-SS--HHHHHHHHH....HS--SEEEEEEEBGGGSTTCBBBSTTSTTBBSEEEEEETTEEEEEEEEB--SHHHHHHHHHHCCHHSSSGGGGHHHHH CS
                  ..xxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 184 ..gkdldkaderalvk....keknepvfvtdfPaelkpFyarkeeddkkltesyDllingvElvgGslRiedpeeleeklkskgldeeaeekfswyle 275
                    ++d+++ +e+al      k k++++ + +fP + +pFya  + +++++t++yD++i+g E+++G +Ri+ p ele++++skgld  ++  +++y++
   KHJ32499.1 417 tdDEDMSTSQEKALGAlvrkKYKTDFYVLDKFPTAARPFYAMPDPENPAVTNAYDFMIRGQEILSGGQRIHLPGELEASIRSKGLD-PNQPGIKEYVD 513
                  998899999999987666669999**************************************************************.99999****** PP

                  HHHC.T--SEEEEEEEHHHHHHHHCT-SSGGGCSSS-XX CS
                  xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 276 aley.GapphgGlglGldRlvmlllgsesIrdviaFPkl 313
                   ++  G+pphgG g+GldR+v++ l+++s++ +  +P++
   KHJ32499.1 514 IFKSvGVPPHGGGGIGLDRVVAWYLNLPSVHLTCDYPRT 552
                  **987****************************999997 PP

>> tRNA_anti-codon  OB-fold nucleic acid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   1.7e-09   7.7e-06       2      75 ..      91     178 ..      90     179 .. 0.90

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 1.7e-09
                      EEEEEEEEEEEEEETTEEEEEEEETT.EEEEEEEET.......HHHHHHHTTS-TTSEEEEEEEEEEC..TTS......SEEEEEEEEEE CS
  tRNA_anti-codon   2 tvaGrvtsisdrsggkvifidlrDgt.griqvvlfr.......eeatklaenlkeGdvvrvtGrvkrr..pgg......elelkveeiel 75 
                      ++++++++ +  +g+k++f++lr +   ++q v+         +++ k+   lk +++v+v+ +vk+   p        e+el+ +++ l
       KHJ32499.1  91 KLRAWIQNAR-MQGAKMAFLELREEGsWTVQGVVAAnnegtvsKQMVKWIGGLKLESFVQVEAEVKKPleP-VksckvsEIELHLTKLYL 178
                      6899*****9.*************9989*******99*******************************662.146677799999999876 PP

>> SCAB_CC  Coiled-coil regions of plant-specific actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   1.4    0.0017       7.4      75     132 ..      19      76 ..      12     110 .. 0.87
   2 ?    3.7   0.0     0.011        50     117     138 ..     249     270 ..     223     277 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0017
     SCAB_CC  75 kklveeersfaraeiesaraavqrveealeeeeksskaskkqdveelkeevqearrik 132
                 kk  +++ + a+ e e+ar a+ r  +a  e + s + + kq+   + + ++ a ++ 
  KHJ32499.1  19 KKGAKKAEAKAKKEAEKARKAAEREATAASEINISNEDTAKQNYGPISNSTKTASKLI 76 
                 566678889999************99999999999999****9999999999887654 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.011
     SCAB_CC 117 dveelkeevqearrikmlhqPs 138
                  ve+l  e   arr k++h Ps
  KHJ32499.1 249 AVEDLFCEYLRARRFKRFHPPS 270
                 789999999************9 PP

>> NARP1  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   6.2   6.8e-05      0.31     398     467 ..      10      78 ..       2     105 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 6.8e-05
                 HHHHHT-S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--........-------------S-SSSTTTT- CS
       NARP1 398 eeaksaelseaerkklrkkakkaekkaekeeaekaekekekk.aaekkakkedeeakkededplgekLvkt 467
                  e++sa++s++  kk++ kakk+++ka+k+++++a++ +e + ++e++ak++ +     ++  +++kL++ 
  KHJ32499.1  10 PENSSAAVSKKGAKKAEAKAKKEAEKARKAAEREATAASEINiSNEDTAKQNYGPI--SNSTKTASKLIHL 78 
                 46778899***************999999998877766663314444444443333..3334456666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1124  (0.0626917); expected 358.6 (0.02)
Passed bias filter:                      689  (0.0384294); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.26s 00:00:00.91 Elapsed: 00:00:00.41
# Mc/sec: 4126.27
//
Query:       KHJ32500.1  [L=476]
Description: putative protein transport protein sec61 alpha subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-71  241.3   8.2    1.7e-71  241.0   8.2    1.1  1  SecY             SecY translocase
    1.5e-18   66.3   0.3    4.2e-18   64.9   0.3    1.8  1  Plug_translocon  Plug domain of Sec61p


Domain annotation for each model (and alignments):
>> SecY  SecY translocase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.0   8.2   1.9e-75   1.7e-71       1     305 [.      76     457 ..      76     458 .. 0.83

  Alignments for each domain:
  == domain 1  score: 241.0 bits;  conditional E-value: 1.9e-75
                 BTTSSTCHHHHHHHHHHHHH.HHHSSSSSSTS-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC..........HH.HHHHHHHHHHHHHHHHHHHH CS
        SecY   1 sifaLGImPyitasIilqLl.tvvipkleelkkegeegrkkinqitryltvvlalvqalgialslg..........lalllivlqltagtvllmwLgEq 88 
                 ++++LGI+P+i++++++qLl ++   +l  ++ + +++r+++++++++++++l++ qa++++++ g          ++++l++lql+++++++++L+E+
  KHJ32500.1  76 TLMELGITPIISSGMVFQLLaGT---HLIDINLDLKSDRELYQTAQKLFAIILSMGQATVYVFT-GlygqpsdlgaGVVFLLILQLVVAGLIVILLDEL 170
                 89******************777...8999997899************************8865.5689*******779******************** PP

                 HHH.HSSTTHHHHHHHHHHHHHHC.CHSS.................-HHHH.............SS.......THHHHHHHHHHHHHHHHHCHHHHBEE CS
        SecY  89 ite.kGiGnGisllifagivarlp.kals.................gliel.............ale.....gilallllllvtllvillvvyveeaer 150
                 +++ +G+G+Gisl+i+++i+++++ ka+s                     l               +     + l+++l+ll+tl+v+++v+y++ +++
  KHJ32500.1 171 LQKgYGLGSGISLFIATNICESIVwKAFSpttlntgrgpefegaviA---LvhllftwpnkqraL-QeafyrQNLPNILNLLATLVVFAAVIYLQGFRV 265
                 *****************************777777776666654441...244444445555431.155667669************************ PP

                 EECBBBSTT....S.S-EEEEETTCCCSCHHHHHHHHHHHHHCCCCS..........................................TCCCS..THH CS
        SecY 151 ripvqyakrgrkggqssylPlklnyagviPiIfassllalpstiaqfl.........................................lalls..psv 206
                 +ipv+++++   +g+++ +P++l+y++++Pi+++s+l +    i q+l                                         +   +   ++
  KHJ32500.1 266 EIPVKSSRQ---RGSRGSYPVRLFYTSNMPIMLQSALSSNVFLISQMLysrfsenllvklvgtwepkegssqlfavsglsyymsppfsfT---EalLDP 358
                 *******55...599************************655555555555566666666677777777766666666655555554432...134233 PP

                 HHHHHHHHHHHH....HHHHHHTCT.THHHHHHHCCHHTBSSSCTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS.TT.TTHHHHHHHHH CS
        SecY 207 lyvvlyvlliif....Fayfyteit.fnpkevaenlkksggfipgirpgketakyLekvlsritliGalflaliavlpdllgasligafggtslLivVg 300
                 +++++y++ +++    F+++++e++ ++p++va++l+++g ++ g+r+ +++ ++L++++++++++G+++++ ++v +dllga  +g  +gt++L++V+
  KHJ32500.1 359 IHTAVYIAYMLIacavFSKTWIEVSgSSPRDVAKQLRDQGLVMAGHRE-QSMYRELKRIIPTAAAFGGACIGGLSVASDLLGA--LG--SGTGILLAVT 452
                 5666666666666667*******************************8.9*********************************..87..********** PP

                 HHHHH CS
        SecY 301 valet 305
                 +++ +
  KHJ32500.1 453 IIYGY 457
                 **976 PP

>> Plug_translocon  Plug domain of Sec61p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.9   0.3   4.7e-22   4.2e-18       1      35 []      41      75 ..      41      75 .. 0.99

  Alignments for each domain:
  == domain 1  score: 64.9 bits;  conditional E-value: 4.7e-22
                     HHHHHHCCSB-TT--SSS-TCCHTTTCCCCTSSTT CS
  Plug_translocon  1 llYlvlsqiPLyGissssssDpfywlRaifAsnrG 35
                     l++lv+sqiPLyGi+ss++sDp+ywlR+++AsnrG
       KHJ32500.1 41 LIFLVMSQIPLYGIVSSDTSDPLYWLRMMLASNRG 75
                     7*********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3505.07
//
Query:       KHJ32501.1  [L=189]
Description: hypothetical protein EV44_g4150 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.033   14.6   0.0      0.053   13.9   0.0    1.4  1  DciA      Dna[CI] antecedent, DciA
       0.06   12.1   0.0        0.2   10.4   0.0    1.7  2  Cas_Csm6  CRISPR-associated protein (Cas_Csm6)
       0.12   10.7   0.3       0.15   10.5   0.3    1.1  1  DUF3141   Protein of unknown function (DUF3141)


Domain annotation for each model (and alignments):
>> DciA  Dna[CI] antecedent, DciA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   8.9e-06     0.053      40      89 .]     120     168 ..      96     168 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.9e-06
        DciA  40 hcrpvkl.rdgtLvvevesgawateLryqkpqllerlneelgeeavrriri 89 
                 + +p k  +d++L v+v+sg     L+++   ++ +ln++lge+ +r+i++
  KHJ32501.1 120 RHKPKKAqEDNRLLVRVSSGH--PALSMSPYAVMLQLNQHLGEKLIREIQV 168
                 567888856999********9..899999********************86 PP

>> Cas_Csm6  CRISPR-associated protein (Cas_Csm6)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.11   6.6e+02     208     233 ..      27      52 ..      21      81 .. 0.74
   2 ?   10.4   0.0   3.3e-05       0.2      33      72 ..     125     169 ..     121     172 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.11
    Cas_Csm6 208 ladfvrritplvvelleailkekcki 233
                 + +f++ +++++ + +e+ ++ + + 
  KHJ32501.1  27 FREFIKDLNSVAHKHFECHVRGHNRP 52 
                 56899999999999999999987654 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 3.3e-05
    Cas_Csm6  33 deneddtiLlNvsSGTPaMk.s....alvllavlgekrlkpvQVs 72 
                 +++ed+++L+ vsSG Pa+  s    +l l + lgek +  +QV+
  KHJ32501.1 125 KAQEDNRLLVRVSSGHPALSmSpyavMLQLNQHLGEKLIREIQVT 169
                 5699*************9742233337888888999999999996 PP

>> DUF3141  Protein of unknown function (DUF3141)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.3   2.4e-05      0.15     446     511 ..      55     120 ..      24     133 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 2.4e-05
     DUF3141 446 PwvralvtelsaellrelhPlrlerellsdrnPllaalkelaekvrearkpvsednpflalqeavs 511
                 P+   + te+sa++  + +P++l+ + ++ ++P+++a +++  ++ ++r+p+++ +p l++++++ 
  KHJ32501.1  55 PYSTSTKTEQSANTGLKPQPKQLKVQSFTPSQPAITAATAIKSALPKQRAPLTPVQPCLTTRTQTR 120
                 8888999**************************************************999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1463.35
//
Query:       KHJ32502.1  [L=346]
Description: putative rna- rbd [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.1e-06   26.5   0.0    1.1e-05   25.1   0.0    1.8  2  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
  ------ inclusion threshold ------
      0.046   13.6   1.3      0.081   12.8   1.3    1.4  1  Sigma70_ECF  ECF sigma factor


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   1.3e-09   1.1e-05       1      69 [.     164     230 ..     164     231 .. 0.92
   2 ?   -2.6   0.0      0.57   5.1e+03      29      49 ..     262     282 ..     260     284 .. 0.75

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 1.3e-09
                 EEEESETTTSSHHHHHHHHHTTSCE.EEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpi.ksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ++V+nL++ +t  +++  + ++G+   s++l+++   +++ +a V  e+ke A++++e++n++  +g+ l
  KHJ32502.1 164 VIVKNLATGTTAADIESAMAPVGGLiLSCRLISE---RPRVIAEVILETKEGADNIVETFNNQSADGNIL 230
                 68*******************66655*******8...*************************99998866 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.57
                 EEEEETTTSEEEEEEEEESSH CS
       RRM_1  29 klvrdetgkskgfafVeFesk 49 
                 + ++d+t+ s+ +a  +F+++
  KHJ32502.1 262 DYINDQTEDSRSYAETDFNKS 282
                 667889999999997777665 PP

>> Sigma70_ECF  ECF sigma factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.3     9e-06     0.081      81     106 ..      24      49 ..      20      78 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 9e-06
  Sigma70_ECF  81 eamrrilidhaRrrkrqkRGGdvvra 106
                  e  ++++ d+aRr+++ +RGG+ +++
   KHJ32502.1  24 ESVAQKMFDKARRQNTSRRGGGHHKH 49 
                  66799****************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:01.12
# Mc/sec: 935.55
//
Query:       KHJ32503.1  [L=894]
Description: putative kinase domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.3e-50  170.2   0.1    2.3e-49  168.2   0.1    1.9  1  Pkinase      Protein kinase domain
    4.4e-23   81.9   0.0    8.9e-23   80.9   0.0    1.4  1  Pkinase_Tyr  Protein tyrosine kinase
    0.00021   21.3   3.9    0.00052   20.0   0.1    2.3  2  APH          Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.013   15.1   0.1      0.046   13.3   0.1    1.7  1  RIO1         RIO1 family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.2   0.1   5.1e-53   2.3e-49       4     264 .]     322     652 ..     319     652 .. 0.87

  Alignments for each domain:
  == domain 1  score: 168.2 bits;  conditional E-value: 5.1e-53
                 EEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.......CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS. CS
     Pkinase   4 leklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.......hpnivrlyevfeekdelylvleyveggeladllerkgs. 94 
                 l  lG+G+fG+V+k+ + +t++ vAvK++k++ a  ++    ++E+++l  l+       + +++rl+++f + ++l+lv+e+++ + l +l++++g  
  KHJ32503.1 322 LDVLGQGTFGQVVKCQNLKTQEVVAVKVVKNRTAYFNQ---SMMEVSVLDLLNtkldkydSHHLLRLKDTFIHRQHLCLVFELLSVN-LYELIKQNGFr 416
                 678****************************9998766...589999987665545456689***********************66.999**988877 PP

                 .--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE..TTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHH CS
     Pkinase  95 .lseeeakkiakqilegleylHskgiiHrDlKpeNiLid..ekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyel 190
                  ls + ++ +a+q+l+gl  l ++++iH+DlKpeNiL++  e+ ++Ki+DFG a+  +++  + +++ ++ Y++PEv+ + +ys+++D+WslG+i++el
  KHJ32503.1 417 gLSTTLVRVFAQQLLHGLCLLNKARLIHCDLKPENILLKnlESPVIKIIDFGSACDERQT--VYTYIQSRFYRSPEVILGLPYSSAIDMWSLGCIVVEL 513
                 8**************************************444555*********998885..69*********************************** PP

                 HHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS....................................................... CS
     Pkinase 191 ltgkppfsgekgkekvekeldqlekilkilg.etkeklpeasei....................................................... 233
                 + g p+f+g+++ ++v++       i+++lg + +  l+  ++                                                        
  KHJ32503.1 514 FLGLPLFPGSSEYNQVSR-------IVEMLGnPPNWMLEMGKQAgeffekrispddygkrtyhlksleqysrehgtkeqpskkyfeattlpdiiksyvm 605
                 ********5555554444.......4555554222222333333444555589999999**************************************** PP

                 ................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 234 ................seeakdllkkllkkdpkkRltaeellqhpyl 264
                                    ++d+++ ll+ +p +R++ ++++ hp++
  KHJ32503.1 606 prknmkqheiekemnnRIALIDFVRGLLNINPLERWSPQQAKLHPFI 652
                 **************988899*************************96 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.9   0.0     2e-26   8.9e-23       5     213 ..     323     527 ..     320     545 .. 0.81

  Alignments for each domain:
  == domain 1  score: 80.9 bits;  conditional E-value: 2e-26
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHH.......HHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeaki.......mkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkk 95 
                  + lG+G+fG+Vv+++      k+++ VavK++k+++   + ++ + e+++       + k++ +++++l    +++++l++v+e+++  +L + ++++
   KHJ32503.1 323 DVLGQGTFGQVVKCQNL----KTQEVVAVKVVKNRTAYFN-QS-MMEVSVldllntkLDKYDSHHLLRLKDTFIHRQHLCLVFELLSV-NLYELIKQN 413
                  68************999....88999******88776653.33.33333311111125688999*********************986.8******** PP

                  CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE..TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHH CS
  Pkinase_Tyr  96 ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse..nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsf 191
                    + l+++ +  fa+q+ +G+  L++ +l+H dl   N+Ll++  + v+ki DfG a d  ++ +++       +  + +pE++    ++s+ D+Ws 
   KHJ32503.1 414 GFRGLSTTLVRVFAQQLLHGLCLLNKARLIHCDLKPENILLKNleSPVIKIIDFGSACDERQTVYTY-----IQSRFYRSPEVILGLPYSSAIDMWSL 506
                  9999***9999*******************************75577********999983333332.....2234578******************* PP

                  HHHHHHHHTTSSGTTTTSHHHH CS
  Pkinase_Tyr 192 GvllwEiftlgespypglknee 213
                  G ++ E+f  g   +pg ++ +
   KHJ32503.1 507 GCIVVELFL-GLPLFPGSSEYN 527
                  *******97.666666665544 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.1   1.2e-07   0.00052     127     197 ..     388     471 ..     362     473 .. 0.73
   2 ?    1.4   1.1     0.057   2.6e+02      84     143 ..     674     733 ..     660     739 .. 0.78

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 1.2e-07
                 HHHHCHHHCCCGCCTCCHHHHHHHH.........HHHHHHHH--S....SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 127 rqlesatarllaselldlleeleeq.........vlaalaallpg....elptvllHgDlhpgNllvdpddgrvtGviDfedag 197
                  ++++++ +l+ ++l   l el +q         + + +a+ l+       +++l+H+Dl+p N+l++  + +v+ +iDf+ a+
  KHJ32503.1 388 TFIHRQHLCLVFELLSVNLYELIKQngfrglsttLVRVFAQQLLHglclLNKARLIHCDLKPENILLKNLESPVIKIIDFGSAC 471
                 556666666666666664444444447777777744444444444588899*****************88888899****9886 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.057
                 S.HHHHHHHHHHHHHHHHHHCCHHCH.-STTTB-SHHCHTCCHHHHHHCHHHCCCGCCTCC CS
         APH  84 r.klsaaqlpellealgeflaalhqvdpaalpladflaqdlellrqlesatarllaselld 143
                 r +    q+++++eal   +a++ q+ +a++  +  ++q l++    +s++ ++ +s++++
  KHJ32503.1 674 RlPAPGTQQQQQAEALSKQRAQVAQA-QAHAQAQQSSPQALFMSGATHSQHLHSSQSLQPP 733
                 44445779999999999999999999.7777777777788999999999977777777665 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1     1e-05     0.046      76     153 ..     390     471 ..     332     478 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1e-05
                 EEEETTEEEEE--EETTEEGGBHHHCG.-HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT...EEEE--GTTEE CS
        RIO1  76 ielkrhvlvmefigedgvaapklkdve.eeeeaeelyeevleemrklykeaglvHaDLSeyNvlvded...kvviIDvsQav 153
                 i+ ++ +lv e+++ + +++ k +  +  ++ + +++++ l +   l+++a+l+H+DL   N+l+++     + iID++ a 
  KHJ32503.1 390 IHRQHLCLVFELLSVNLYELIKQNGFRgLSTTLVRVFAQQLLHGLCLLNKARLIHCDLKPENILLKNLespVIKIIDFGSAC 471
                 5556668999999988888888888875555666666555555677888***************998642235579987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (894 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       905  (0.0504769); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.77u 0.26s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 5970.59
//
Query:       KHJ32504.1  [L=304]
Description: putative effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00035   20.3   0.0    0.00067   19.4   0.0    1.5  2  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   3.7e-08   0.00067     187     237 ..       1      53 [.       1      60 [. 0.83
   2 ?   -3.6   0.0      0.39   6.9e+03     133     160 ..     207     234 ..     205     240 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 3.7e-08
       RVT_2 187 lakkfklkdlgkvskfLGieiaq..eaggiklsladyiakvvkkfeltdaktv 237
                 ++k f+ k+lg+++ fLG+ i++  ++ ++ l +++y+++ + kf++ +ak  
  KHJ32504.1   1 MSKCFNTKNLGEMEMFLGMRITRdrKNRTLWLDQQQYLERTLTKFGIPNAKHR 53 
                 6789*****************994456677789**************998753 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.39
       RVT_2 133 idkvLkklgferseaesGlyvrgtgegk 160
                 + +vL+++g+ +  a +G+ v + g+++
  KHJ32504.1 207 MAQVLRDMGYPEYVAPNGITVETRGDNQ 234
                 5688999999999999999999888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       513  (0.0286129); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2315.75
//
Query:       KHJ32505.1  [L=724]
Description: putative elmo ced-12 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-39  134.2   1.1    1.2e-38  132.9   0.6    1.9  2  ELMO_CED12  ELMO/CED-12 family
    9.2e-30  103.9   0.5    9.2e-30  103.9   0.5    2.6  2  PH_12       Pleckstrin homology domain
    1.2e-12   48.0   0.4    5.1e-12   46.0   0.0    2.3  1  DUF3361     Domain of unknown function (DUF3361)
  ------ inclusion threshold ------
      0.063   13.4   0.0        1.2    9.2   0.0    3.0  3  Arm         Armadillo/beta-catenin-like repeat
      0.067   13.7   0.5        2.4    8.7   0.1    2.6  2  DUF4286     Domain of unknown function (DUF4286)
      0.081   12.7   0.5       0.36   10.7   0.1    2.2  2  AbiJ_NTD5   AbiJ N-terminal domain 5


Domain annotation for each model (and alignments):
>> ELMO_CED12  ELMO/CED-12 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.92   2.7e+03      64     115 ..     131     179 ..     129     227 .. 0.58
   2 !  132.9   0.6   4.1e-42   1.2e-38       3     176 ..     243     433 ..     242     434 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.92
  ELMO_CED12  64 tGlLgLenLlyfaenheeefqkllsessrrpseeeypfavasinvtslllel 115
                 +G++g + L   +  ++++f  ++s+ +++ +      + a++ + +l+ + 
  KHJ32505.1 131 PGIFGFRALKPAIAVYPQFFEMVVSQLKSADH---LLCSNALMLLNALIRDV 179
                 78888888888888888888877777666544...33333333333344443 PP

  == domain 2  score: 132.9 bits;  conditional E-value: 4.1e-42
  ELMO_CED12   3 lekkrktpldlenpeherlLkelwsalypdepeinst................ksrisekWkklGFqgedPatDFrgtGlLgLenLlyfaenheeefqk 85 
                 l+k+r+t ++ en eh+++L++++s++ ++++++ ++                ++++ e W++lGFq+e+P  +F++tG+Lg+++L++fa  +ee++qk
  KHJ32505.1 243 LKKRRETVVNIENLEHQSMLEKIYSSSQKKNKKEVQStikntqqssingktnsNEQNLEMWRNLGFQTESPILEFEQTGVLGMMDLVHFATSNEESYQK 341
                 799**********************9998888776668**************9999******************************************* PP

  ELMO_CED12  86 llsessrrpseeeypfavasinvtslllelleiektdeed.eeeqkdklktnntkllssnlnafeelfsvlfllfdslWkekkatimdfnkv 176
                  l+e+++rp +e++p+ +as++vt +l+++++ie++d e  + ++  +  +n+ +l++++  ++ ++++ +++ f  lWk+ +a+ ++f+kv
  KHJ32505.1 342 YLQEQETRPFNERCPIGRASMSVTGILYDHFDIERSDPEYiKDYRAIDGMKNYADLFRPFILQWPRIHVKALNSFIVLWKQVGAEKQEFGKV 433
                 **************************************9877777888888****************************************9 PP

>> PH_12  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   4.8       1.1   3.1e+03      52     106 ..     249     294 ..     234     318 .. 0.54
   2 !  103.9   0.5   3.1e-33   9.2e-30       2     134 .]     505     668 ..     504     668 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.1
       PH_12  52 qdpsleeltekidlsdisevksgkeaphskesgksssslskksssklsfslitl..s 106
                 ++ ++e+l+++  l++i + +++k+ ++++++ k++++             i+   +
  KHJ32505.1 249 TVVNIENLEHQSMLEKIYSSSQKKNKKEVQSTIKNTQQS-----------SINGktN 294
                 445666666666666666666666655555433222222...........1111112 PP

  == domain 2  score: 103.9 bits;  conditional E-value: 3.1e-33
       PH_12   2 keqRincLleGawfpk.......pg.esgkrekkkwrfvkLspnrkvLhygdfeekspqdpsleeltekidlsdisevksgkeaphskesgkssssl.. 90 
                 keqRi++Ll+Gawfp+       +g + ++  + +wr+v+Ls++r++Lhy+dfe++ +++ps+++l++kidl++is+v s+++a ++++s+  +s++  
  KHJ32505.1 505 KEQRIRTLLNGAWFPRteinvdvVGaQDEHTHSLSWRYVRLSNDRRYLHYDDFESQATNEPSINNLSQKIDLENISSVASNTSACSNEDSSICTSTTaa 603
                 9**************9999988644344444449*************************************************9777755555555445 PP

       PH_12  91 ......skksssklsfslitl....................skekellelvasseseaaeWlDGLsmLlg 134
                       +     +++ + it+                     kek  l l++ +++ a+ WlDGL+mLl+
  KHJ32505.1 604 tarpseA-----QTKATGITIrcfvsikdskqrnldtsnemVKEKTALILMPANKNLASSWLDGLLMLLD 668
                 5444331.....333333333344555666777777777779**************************96 PP

>> DUF3361  Domain of unknown function (DUF3361)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.0   0.0   1.7e-15   5.1e-12       3     128 ..      38     179 ..      36     214 .. 0.83

  Alignments for each domain:
  == domain 1  score: 46.0 bits;  conditional E-value: 1.7e-15
     DUF3361   3 AqeFisrdGlkllvkiveegkesgeilayaLtafleLmdhgivsWdtlsde....FikkiasivnksaadasilqrslaiLesivlnss.......... 87 
                 A+ Fis +Gl++l +++ +   sg++layaL+a+  L++   ++W++++++     +++ +  + ++   ++il+ +++iL  +v  s+          
  KHJ32505.1  38 ADVFISTGGLQVLRQLIMTT--SGNTLAYALSALSRLLEV-EMGWEIFESNgaeaLVERLVGLIVTH-PLVNILRGAMSILVAVVGHSQnskessqvpg 132
                 788***************98..9****************9.99***999753333788888888888.449**************98886656655554 PP

     DUF3361  88 .elyelvekevt.....lesLiehLqssnqeiqtnalaLlnALllka 128
                    +  ++ ++      +e +++ L+s+++ +++nal+LlnAL++ +
  KHJ32505.1 133 iFGFRALKPAIAvypqfFEMVVSQLKSADHLLCSNALMLLNALIRDV 179
                 322666666666999999*************************9865 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00041       1.2       9      39 ..      42      72 ..      34      74 .. 0.90
   2 ?   -0.3   0.0       0.4   1.2e+03       2      24 ..     201     224 ..     201     229 .. 0.80
   3 ?   -3.2   0.0       3.3   9.9e+03      17      30 ..     328     341 ..     328     342 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00041
                HHTTHHHHHHHHTTTSSHHHHHHHHHHHHHH CS
         Arm  9 ieaGavppLvrLLssedeevqeeAawALsNL 39
                i+ G++++L +L+ +++ +++  A++ALs L
  KHJ32505.1 42 ISTGGLQVLRQLIMTTSGNTLAYALSALSRL 72
                788*************************987 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.4
                 HHHHHHHHHTTHHHHHHHHTT.TS CS
         Arm   2 senkdavieaGavppLvrLLs.se 24 
                 +e ++ + ++G+v+   +L++ s 
  KHJ32505.1 201 PELIKKLQDLGIVQTAYDLMQsSS 224
                 577888999***********9544 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 3.3
                 HHHHTTTSSHHHHH CS
         Arm  17 LvrLLssedeevqe 30 
                 Lv++ +s  e++q+
  KHJ32505.1 328 LVHFATSNEESYQK 341
                 89999******997 PP

>> DUF4286  Domain of unknown function (DUF4286)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.083   2.5e+02      55      74 ..     329     348 ..     313     355 .. 0.89
   2 ?    8.7   0.1   0.00081       2.4       6      70 ..     490     555 ..     488     573 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.083
     DUF4286  55 vqyeveseedleayieehap 74 
                 v++ +++ee++++y++e+ +
  KHJ32505.1 329 VHFATSNEESYQKYLQEQET 348
                 7899************9865 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00081
     DUF4286   6 vnvdeeveeewleWlkeehipevlatglfskarllrvl.eeeeeegktysvqyeveseedleayie 70 
                 ++++ee ++e l+++ke+ i+++l+   f + +++  +   ++e+++++s +y+  s++     ++
  KHJ32505.1 490 FQIREELRNEALQFMKEQRIRTLLNGAWFPRTEINVDVvGAQDEHTHSLSWRYVRLSNDRRYLHYD 555
                 6899*********************88777777766555668888899999997655554443333 PP

>> AbiJ_NTD5  AbiJ N-terminal domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00012      0.36      23      84 ..     198     259 ..     196     271 .. 0.84
   2 ?   -2.0   0.0       1.1   3.2e+03      63      85 ..     622     644 ..     616     646 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00012
   AbiJ_NTD5  23 sdWkeLglltdkldlienhprLLrslsfgDdDYegnvldvlekllsedpenLkeleeyleek 84 
                 ++W eL   ++ l +++    L++s s +D  Y+ + +++++kl+ +++++  +  e le++
  KHJ32505.1 198 ENWPELIKKLQDLGIVQTAYDLMQSSSHQDMAYSLLEFQAVSKLILKKRRETVVNIENLEHQ 259
                 89*****************************************9988877555555555555 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.1
   AbiJ_NTD5  63 lekllsedpenLkeleeyleeks 85 
                   ++ +++++nL++ +e+++ek 
  KHJ32505.1 622 FVSIKDSKQRNLDTSNEMVKEKT 644
                 567889999********999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (724 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1535  (0.0856155); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.70u 0.29s 00:00:00.99 Elapsed: 00:00:00.44
# Mc/sec: 4948.64
//
Query:       KHJ32506.1  [L=478]
Description: putative mechanosensitive ion channel family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.071   12.6   0.1       0.15   11.6   0.1    1.6  1  MS_channel  Mechanosensitive ion channel


Domain annotation for each model (and alignments):
>> MS_channel  Mechanosensitive ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   8.5e-06      0.15     120     183 ..     196     258 ..     188     283 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 8.5e-06
                 EEEEE-TTS-...HHHHHHHHHHHHHH-TTB-TTS-EEEEEEEE-SSSEEEEEEEEEET...TT CS
  MS_channel 120 vsigvtyssdvkklekvleelkealkekpevlkdkellvvldefgdsslnfevrvfvktvvpee 183
                 v ++v++++  ++++ ++++l+e+++ + +  +++ l+ + + +++ s+++ + +f+k+  +++
  KHJ32506.1 196 VPVTVKFGTTLEQIDALRQRLLEFVTIENREYQQNILTELTTIYEAYSVTLNIVFFYKS-NWQN 258
                 7899**********************99999999*************************.4443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (478 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       615  (0.034302); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.22s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3624.41
//
Query:       KHJ32507.1  [L=246]
Description: hypothetical protein EV44_g3156 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       772  (0.0430587); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.36
# Mc/sec: 2066.52
//
Query:       KHJ32508.1  [L=175]
Description: hypothetical protein EV44_g3555 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.04   13.9   0.2       0.11   12.5   0.1    1.8  2  BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
       0.13   12.0   0.4        1.5    8.6   0.1    2.0  2  DUF3485   Protein of unknown function (DUF3485)


Domain annotation for each model (and alignments):
>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.16   1.4e+03      42      64 ..      21      43 ..      12      77 .. 0.64
   2 ?   12.5   0.1   1.2e-05      0.11      29      80 ..      66     119 ..      56     137 .. 0.68

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.16
    BBS2_Mid 42 vvslarlekerfayaleNGtvgv 64
                v +l +++  + a++++ G   v
  KHJ32508.1 21 VKILQEIKTIKTAFSMAHGPARV 43
                55677777777777777775544 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 1.2e-05
    BBS2_Mid  29 eeelvaeitetekvvslarleker..fayaleNGtvgvyekkerlWrvksknev 80 
                 +ee ++ei++ +    + ++  ++   a ++ NG ++++    + W++ +k++ 
  KHJ32508.1  66 NEEEKKEISKLSSEELVEKIGMKEivGARSMTNGQIKIFFPGDETWQIMEKQRD 119
                 444455555544444444444444115789********************9984 PP

>> DUF3485  Protein of unknown function (DUF3485)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.018   1.6e+02      85     133 ..      32      69 ..      26      99 .. 0.75
   2 ?    8.6   0.1   0.00016       1.5      30      66 ..     102     136 ..      86     154 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.018
     DUF3485  85 qgkelvhspnvclpaqgWtiesrskvelevelgggklkvnrlllrkggr 133
                 ++ ++ h p +  p+q+W+            ++g+++  ++l++++ ++
  KHJ32508.1  32 TAFSMAHGPARV-PGQTWAA----------AAKGPEVASTTLRIQNEEE 69 
                 556789999999.******8..........3445555555555555554 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00016
     DUF3485  30 esfpaeiggWkgvsddpedewvpkalgaddylsrtYr 66 
                 + f ++ + W+ ++++   +w++k  ++++++sr+Y+
  KHJ32508.1 102 KIFFPGDETWQIMEKQR--DWTQKLAPTAQNVSRSYQ 136
                 56666667899555555..5****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       608  (0.0339115); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.35
# Mc/sec: 1481.44
//
Query:       KHJ32509.1  [L=140]
Description: putative acyl carrier protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.9e-13   48.6   0.2    1.1e-12   48.1   0.2    1.2  1  PP-binding    Phosphopantetheine attachment site
    8.5e-05   22.7   0.9    0.00013   22.1   0.9    1.4  1  PP-binding_2  Acyl-carrier


Domain annotation for each model (and alignments):
>> PP-binding  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.1   0.2   1.2e-16   1.1e-12       3      67 .]      65     133 ..      63     133 .. 0.88

  Alignments for each domain:
  == domain 1  score: 48.1 bits;  conditional E-value: 1.2e-16
  PP-binding   3 lrelvaevlgvplee...idpdtdlf.dlGlDSllavellaaleeefgveiplsdlfehptlaelaayl 67 
                 +++l++   +v +++   i+p++++  dlGlDSl++ve+++a+eeef +eip+ d    +t+ + ++y+
  KHJ32509.1  65 ILDLLKNFDKVKADDlnkISPTAHFLnDLGLDSLDTVEVVMAIEEEFSIEIPDKDADSINTVDQAVKYI 133
                 6777888888866664447*****9989****************************99*****999987 PP

>> PP-binding_2  Acyl-carrier
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.9   1.4e-08   0.00013      46      87 ..      95     136 ..      59     139 .. 0.88

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 1.4e-08
  PP-binding_2  46 wdgldtvefvedveelfdvivsdevadnfetlqeiadlvvae 87 
                    d+ldtve v+ +ee f + ++d+ ad ++t+++   +++a+
    KHJ32509.1  95 LDSLDTVEVVMAIEEEFSIEIPDKDADSINTVDQAVKYILAQ 136
                   69******************************9999988886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.20s 00:00:00.57 Elapsed: 00:00:00.35
# Mc/sec: 1190.92
//
Query:       KHJ32510.1  [L=258]
Description: putative protein-l-isoaspartate o-methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-54  185.3   0.0    8.1e-54  182.6   0.0    2.0  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
     0.0032   17.3   0.0     0.0043   16.9   0.0    1.3  1  Methyltransf_23  Methyltransferase domain
  ------ inclusion threshold ------
      0.027   14.3   0.0      0.047   13.5   0.0    1.5  1  Methyltransf_31  Methyltransferase domain
      0.034   14.1   0.0      0.057   13.4   0.0    1.4  1  Methyltransf_32  Methyltransferase domain
      0.053   12.6   0.0      0.078   12.0   0.0    1.1  1  RrnaAD           Ribosomal RNA adenine dimethylase
      0.064   12.8   0.1       0.11   12.0   0.1    1.4  1  MTS              Methyltransferase small domain
      0.085   12.4   0.1       0.14   11.7   0.1    1.3  1  MetW             Methionine biosynthesis protein MetW


Domain annotation for each model (and alignments):
>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.6   0.0   3.2e-57   8.1e-54       3     208 ..      10     252 ..       8     254 .. 0.93

  Alignments for each domain:
  == domain 1  score: 182.6 bits;  conditional E-value: 3.2e-57
                 HHHHHHHHHHTTS---HHHHHHHHHS-GGGGSSCGGGGGTTSSS-EEEETTEEE--HHHHHHHHHHTT..--TT-EEEEES-TTSHHHHHHHHHHCTTC CS
        PCMT   3 kealieelkkkgviksdkvaealeevdReefvpesfkekaYedaplsigynatiSaphmvalalelle..lkkgarvLevGsGsGyltavlarlvgekg 99 
                 + +li+++++kg+i++ +v++a+++vdR++++p+     +Yedap++ig +atiSaphm+a a   l   l++garvL++GsGsGyltavl++lv +++
  KHJ32510.1  10 NVELIRNMHRKGIITNLRVMNAMLKVDRAHYAPS----RPYEDAPQPIGWGATISAPHMHASAAGALLpfLRQGARVLDIGSGSGYLTAVLTELVLDQC 104
                 679*******************************....9**********************999877669***************************** PP

                 ..................EEEEEESBHHHHHHHHHHHHHCTTC.......SEEEEES-GGGTT............GGG-SEEEEEESSBBSS--HHHHH CS
        PCMT 100 ..................rvvsierikelveeakrnlkkldle.......nvivvvgDGrkGy............eekaPYdaihvgaaapeiPealid 161
                                   +vv++e+i +l e  ++nlkk+++         + +v +DGrkG+             +++ +daihvgaaa+e+ ++lid
  KHJ32510.1 105 ndnvckedrelnakvaqaKVVGVEHILQLRELGENNLKKSERGrelisagLIRFVLADGRKGWcgdgqddgqddaYKASGWDAIHVGAAAKELHKELID 203
                 ***************************************99988899998899**********65554444332224678******************* PP

                 TEEEEEEEEEEESB..SSSEEEEEEEEETTTEEEEEEEEEE---B-BCC CS
        PCMT 162 QLkeGGrlvvPvge..eeeQvlklvdkkadgkvvikkleevrfvpltdk 208
                 QL   Grl +Pv++  ++eQ + +vdk++dg+++  + e+vr+vplt+k
  KHJ32510.1 204 QLRCPGRLFIPVEDfeTKEQWIWQVDKDKDGSITKVRREAVRYVPLTEK 252
                 *************99899*****************************87 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   1.7e-06    0.0043      16      51 ..      72     128 ..      63     190 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1.7e-06
  Methyltransf_23  16 llpklraggrvLdiGcGtGillevlre.....................ngfsvtgvD 51 
                      llp lr+g+rvLdiG G+G+l+ vl e                      +++v+gv+
       KHJ32510.1  72 LLPFLRQGARVLDIGSGSGYLTAVLTElvldqcndnvckedrelnakvAQAKVVGVE 128
                      66779****************999977455555554444444444433234555555 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.8e-05     0.047       2      29 ..      77     104 ..      76     143 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.8e-05
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelaeelgpka 29 
                      ++g rvlD+G+G+G+lt +l e++ +++
       KHJ32510.1  77 RQGARVLDIGSGSGYLTAVLTELVLDQC 104
                      57899***************99665544 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.2e-05     0.057      27      46 ..      80     102 ..      72     151 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.2e-05
  Methyltransf_32  27 ltvvDvGaGkgYLsfvlal...k 46 
                       +v+D+G+G gYL+ vl     +
       KHJ32510.1  80 ARVLDIGSGSGYLTAVLTElvlD 102
                      689**************984331 PP

>> RrnaAD  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   3.1e-05     0.078      30      73 ..      78     125 ..      74     136 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.1e-05
                 TTSEEEEES-TTTCCHHHHHCC-....SEEEEE-S-HHHHHHHHCHTT CS
      RrnaAD  30 ekltvleigpGkGilTeeLakra....kqvvvlElderLakllqkkls 73 
                 +   vl+ig+G G lT+ L + +    +  v  E++e  ak+ q+k+ 
  KHJ32510.1  78 QGARVLDIGSGSGYLTAVLTELVldqcNDNVCKEDRELNAKVAQAKVV 125
                 6678*********99988877666444788899999888888888775 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   4.3e-05      0.11      21      53 ..      70     100 ..      64     131 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.3e-05
                 HHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHT CS
         MTS  21 klLletlpkelsgkvlDlGcGaGvlgaalakes 53 
                   Ll  l +    +vlD+G+G G+l+a+l +  
  KHJ32510.1  70 GALLPFLRQ--GARVLDIGSGSGYLTAVLTELV 100
                 567777877..678*************998765 PP

>> MetW  Methionine biosynthesis protein MetW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   5.4e-05      0.14       9      33 ..      74      98 ..      69     133 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5.4e-05
        MetW  9 elikpgsrvldlGcGdGellellke 33
                 ++++g+rvld+G+G G l  +l e
  KHJ32510.1 74 PFLRQGARVLDIGSGSGYLTAVLTE 98
                57899***************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       511  (0.0285013); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.40u 0.19s 00:00:00.59 Elapsed: 00:00:00.32
# Mc/sec: 2446.95
//
Query:       KHJ32511.1  [L=429]
Description: putative exosome complex exonuclease rrp6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.023   14.7   0.3       0.56   10.2   0.1    2.6  2  Pox_A3L   Poxvirus A3L Protein


Domain annotation for each model (and alignments):
>> Pox_A3L  Poxvirus A3L Protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.016   2.9e+02      16      29 ..      24      37 ..      18      51 .. 0.87
   2 ?   10.2   0.1   3.1e-05      0.56       8      34 ..     201     227 ..     197     235 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.016
     Pox_A3L 16 aanlveylkeDret 29
                ++nl+eyl eD+ +
  KHJ32511.1 24 SSNLIEYLMEDNRK 37
                68*********865 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 3.1e-05
     Pox_A3L   8 pprrCskCaanlveylkeDretikmil 34 
                  ++  s C+ nl++yl++D+ + ++++
  KHJ32511.1 201 DHKTNSFCQRNLTQYLHDDSAKCQVLI 227
                 5677799*************9988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 3116.22
//
Query:       KHJ32512.1  [L=252]
Description: hypothetical protein EV44_g5924 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 1981.21
//
Query:       KHJ32513.1  [L=489]
Description: putative thioredoxin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-17   64.0   0.0    2.4e-17   63.1   0.0    1.4  1  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
    1.3e-06   27.8   0.5     0.0053   15.9   0.1    2.5  2  GIDA           Glucose inhibited division protein A
    5.1e-06   25.4   0.0     0.0028   16.4   0.0    2.2  2  HI0933_like    HI0933-like protein
    1.2e-05   25.3   0.6       0.47   10.4   0.0    3.7  4  NAD_binding_9  FAD-NAD(P)-binding
    1.9e-05   24.1   0.0       0.17   11.1   0.0    2.3  2  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
      0.001   18.7   0.3      0.018   14.7   0.2    2.2  2  DAO            FAD dependent oxidoreductase
     0.0013   17.9   0.1      0.011   14.8   0.1    2.1  2  FAD_binding_2  FAD binding domain
  ------ inclusion threshold ------
       0.01   16.1   0.2      0.037   14.2   0.2    1.9  2  NAD_binding_8  NAD(P)-binding Rossmann-like domain
      0.013   14.6   0.0        0.1   11.6   0.0    2.1  2  Lycopene_cycl  Lycopene cyclase protein
      0.015   14.6   0.0      0.024   13.9   0.0    1.3  1  FAD_binding_3  FAD binding domain
      0.025   13.8   0.0      0.044   13.0   0.0    1.3  1  Thi4           Thi4 family
      0.031   13.6   0.3      0.069   12.5   0.2    1.7  2  FAD_oxidored   FAD dependent oxidoreductase
       0.12   11.5   0.1        5.3    6.1   0.0    2.2  2  K_oxygenase    L-lysine 6-monooxygenase (NADPH-requiring)


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.1   0.0   1.7e-20   2.4e-17       1     290 [.      45     344 ..      45     348 .. 0.85

  Alignments for each domain:
  == domain 1  score: 63.1 bits;  conditional E-value: 1.7e-20
                  CSEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHH.....HHHHCHHHHCCCCHCCTCEEEEESCEEEEETEEECT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   1 kdvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcllskallgvaedaeias.....evvkklnqgielllgeevvkidpgkkkvklekkkeg 93 
                  +dvv++GgGpAGl+a   la+     +l+ + g   n++   s+ + g+ + a  +      e+++++ +    l +e+v++i ++  +    +++ +
   KHJ32513.1  45 YDVVIVGGGPAGLSALSSLARVRRSALLI-DSGKYRNDQTRNSHDVIGSDGMAPSLFrsrarEQIRRYPTV--SLQNETVISIVRDDNQSSFITTV-S 138
                  69***************************.88889999999999999988888877689887766666644..233335*****999888887778.7 PP

                  CEEEEEESEEEE---EEE-BCTCTTC.TTBEECCSECHHHHHHCCSS-TSEEEEES-SHHHHHHHHHHHHHT-E.EEEEESSSSSS.TTS-HHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx.xxxxxxxxxxx RF
  Pyr_redox_2  94 deekiaydklvlAtGssprdlgipGvaenvgklvrtldsaealklkllpkrivvvGgGyiGvElAaalaklgke.vtlveardrll.raldkelsaal 189
                  +++k++  k++lAtG    ++++pG +e +g+++  +  ++ +++  +   + ++ + ++ + +  + + l+k+ +  v   d++  ra+  + s   
   KHJ32513.1 139 SGQKYKSRKIILATGIIDILPDTPGIKEAWGRGMFWCVWCDSWEHRDQS--LGIIASLPTIIGTIYQVTTLNKDiIAFVNGTDTVAnRAFLNATSPGW 234
                  899****************************************999998..666655555555777789999998999******************** PP

                  HHHHHHTTEEEEESCEEEEEEETTE.............EEE.EEETTSCEEEESEEEE-S-EEES-HHCSHCCT-EEEETTEEE--TTSBESSTTEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxx.............xxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 190 eealekeGvevklgtsvkeidgnge.............kle.vvledgeeidadlvvvavGvrpstelleeklglelderggivvdeflrtnvpgiya 273
                  +  l k  v++  +++++ i++ ++             ++  v l+dg++i+    ++    + +++ l+ k+g++l  + +i+v+++     pg++a
   KHJ32513.1 235 QINLAKARVAIE-NQTITSIERLQDgsivrnetsweeyDIFrVNLQDGTQIERGAFIMNF-PKCQRSYLGSKIGVQL-VNERIQVNPSNMKAAPGVWA 329
                  ***********9.88899999888888999999999554438*************99999.555555556*******.***********999****** PP

                  -GGGCTECCSS--HHHH CS
                  xxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 274 iGDvaggkggpelaqaA 290
                  iGD     +g  ++ +A
   KHJ32513.1 330 IGDAN--NDGTTNVLHA 344
                  ***88..5666555555 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0   0.00029      0.41       1      29 [.      46      83 ..      46      99 .. 0.79
   2 !   15.9   0.1   3.8e-06    0.0053      96     149 ..      99     153 ..      96     172 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00029
                CEEEE-SSHHHHHHHHHHHHTT--EEEE.........E CS
        GIDA  1 dviViGgGhAGceAAlaaarlGakvlLi.........t 29
                dv+++GgG AG+ A   +ar   + lLi         t
  KHJ32513.1 46 DVVIVGGGPAGLSALSSLARVRRSALLIdsgkyrndqT 83
                79******************999999986655554442 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 3.8e-06
                 HHHHHHHHHHHTSTTEEEEES-EEEEEECTTEEEEEEE.TTS-EEEECEEEE--T CS
        GIDA  96 lyskevteklenepnleiieeeveeliveekkvkgvvt.edgetikakavviatG 149
                 l++++ +e+++++p +++ +e+v +++ ++++ + ++t ++g+++k++++++atG
  KHJ32513.1  99 LFRSRAREQIRRYPTVSLQNETVISIVRDDNQSSFITTvSSGQKYKSRKIILATG 153
                 689999********************9999888887653789************* PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0     2e-06    0.0028       1      33 [.      45      77 ..      45      82 .. 0.94
   2 !    6.7   0.0    0.0018       2.5     123     163 ..     113     153 ..     103     159 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 2e-06
                 -SEEEE--SHHHHHHHHHHHHTT--EEEE-SSS CS
  HI0933_like  1 kdviviGgGaAGlmaAisaakrgkrVlllekak 33
                 +dv+++GgG+AGl a  s+a+  ++ ll++++k
   KHJ32513.1 45 YDVVIVGGGPAGLSALSSLARVRRSALLIDSGK 77
                 59****************************986 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0018
                  T-EEE-S--EEEEECETTE.EEEEE.TTEEEEESEEEE--- CS
  HI0933_like 123 gvklrletevksvekeedgkfrvktkseeeleadklvlAtG 163
                   v+l+ et ++ v+ +++++f  +++s+++++++k++lAtG
   KHJ32513.1 113 TVSLQNETVISIVRDDNQSSFITTVSSGQKYKSRKIILATG 153
                  6888899999999888888888888***************9 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.2   0.00086       1.2       1      20 [.      48      67 ..      48      74 .. 0.86
   2 !   10.4   0.0   0.00034      0.47     106     154 ..     103     153 ..      98     155 .. 0.79
   3 ?   -1.6   0.0       1.7   2.4e+03     114     141 ..     240     267 ..     226     280 .. 0.77
   4 ?    0.9   0.0      0.29     4e+02      19      39 ..     434     455 ..     423     460 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00086
  NAD_binding_9  1 aivGaGprGlavlerLlara 20
                   +ivG+Gp+Gl++l  L++ +
     KHJ32513.1 48 VIVGGGPAGLSALSSLARVR 67
                   7***************9864 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00034
  NAD_binding_9 106 ellarlpegvtvevhraevvdleeradgq.avll.adgaslaadaVvLAlG 154
                    ++ ++ ++  tv++ +++v+++ +++++   +++ ++g++++ ++++LA+G
     KHJ32513.1 103 RAREQIRRYPTVSLQNETVISIVRDDNQSsFITTvSSGQKYKSRKIILATG 153
                    55556666669999*******99998886345545899************9 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 1.7
  NAD_binding_9 114 gvtvevhraevvdleeradgqavlladg 141
                    + +v + +++++++e+ +dg  v+ ++ 
     KHJ32513.1 240 KARVAIENQTITSIERLQDGSIVRNETS 267
                    4688999999999999999987766544 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.29
  NAD_binding_9  19 ra..kkkspleitlfdpsepgag 39 
                     +  +++++l+it+++ +++g g
     KHJ32513.1 434 LHtgSPENRLSITVIETNSAG-G 455
                    444468999********9998.4 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   0.00019      0.26       1      32 [.      48      78 ..      48      84 .. 0.87
   2 !   11.1   0.0   0.00012      0.17      99     143 ..     117     164 ..     103     172 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00019
  Pyr_redox_3  1 iIiGaGPaGlaaaielkkagledylilEkgni 32
                 +I+G+GPaGl+a   l ++   + l ++ g+ 
   KHJ32513.1 48 VIVGGGPAGLSALSSLARVRR-SALLIDSGKY 78
                 7*****************999.6788888875 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00012
  Pyr_redox_3  99 klfeeVesvkkedeg..fevetske.tyeAkkviiAtGefdk.Pnklni 143
                  + +e+V s+ ++d++  f+ + s++ +y+++k+i+AtG  d+ P++++i
   KHJ32513.1 117 Q-NETVISIVRDDNQssFITTVSSGqKYKSRKIILATGIIDIlPDTPGI 164
                  3.566666666443312555545445************98854665555 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.2   1.3e-05     0.018       1      46 [.      46      92 ..      46     113 .. 0.78
   2 ?    1.6   0.0      0.12   1.7e+02     164     202 ..     116     154 ..     104     167 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.3e-05
                EEEEECTSHHHHHHHHHHHHTT..EEEEESSSSTTSSGGGSSEEEEES CS
         DAO  1 dvviiGGGiiGlstAyeLarrg..VtllekgdiagsgaSgrnsgllhs 46
                dvvi+GGG +Gls+   Lar     +l+++g      ++ ++  ++ s
  KHJ32513.1 46 DVVIVGGGPAGLSALSSLARVRrsALLIDSG-KYRNDQTRNSHDVIGS 92
                9*****************874347******9.5555888887777755 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.12
                 EESECEEEEEEEETCEEEEEEECT.EEE.EEEEEEEE--GG CS
         DAO 164 legtevtgleeedgkvwgverttp.gen.daadavVnaaGa 202
                 l++++v ++ ++d++ + + +t + g++ ++ +++++a+G+
  KHJ32513.1 116 LQNETVISIVRDDNQSSFI-TTVSsGQKyKS-RKIILATGI 154
                 4677899987777665555.44455888455.99******6 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.1   8.1e-06     0.011       1      41 [.      46      86 ..      46      91 .. 0.91
   2 ?    0.3   0.0       0.2   2.8e+02     370     402 ..     301     334 ..     253     345 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 8.1e-06
                   SEEEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGSGGGG- CS
  FAD_binding_2  1 DviViGsGlAGLaAAleaaeaGlkvavvekeqefggataws 41
                   Dv+++G+G AGL+A  ++a+  ++ ++++ +++++ +t  s
     KHJ32513.1 46 DVVIVGGGPAGLSALSSLARVRRSALLIDSGKYRNDQTRNS 86
                   9****************************999988877655 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.2
                    EEES-EEE.BETTSBESTTEEESSBTEEE-STCE CS
  FAD_binding_2 370 hytmgGve.tdengrvldadgqpipGLYAaGeva 402
                    +++  Gv+ ++e+ +v  ++ ++ pG +A+G + 
     KHJ32513.1 301 LGSKIGVQlVNERIQVNPSNMKAAPGVWAIGDAN 334
                    66777887689********************876 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.2   2.7e-05     0.037       1      28 [.      49      76 ..      49      78 .. 0.95
   2 ?   -2.8   0.0       5.5   7.6e+03      18      33 ..     441     455 ..     432     457 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.7e-05
                   EE--SHHHHHHHHHHHCCTEEEEEE-SS CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagfdvlllekr 28
                   IvG+G +Gl+a + La+ +++ ll++++
     KHJ32513.1 49 IVGGGPAGLSALSSLARVRRSALLIDSG 76
                   9************************987 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 5.5
                    CTEEEEEE-SSSSSSG CS
  NAD_binding_8  18 agfdvlllekrdrlGG 33 
                    ++++++++e++ + GG
     KHJ32513.1 441 NRLSITVIETN-SAGG 455
                    46799999985.5566 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   7.3e-05       0.1       1      33 [.      46      76 ..      46      87 .. 0.87
   2 ?    0.3   0.0       0.2   2.8e+02     101     141 ..     113     154 ..      97     170 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 7.3e-05
  Lycopene_cycl  1 DvvviGaGpAglslAarlteakpglkvvlieas 33
                   Dvv++G+GpAgls    l  a+ + + +li+++
     KHJ32513.1 46 DVVIVGGGPAGLSALSSL--ARVRRSALLIDSG 76
                   9************88888..8888888888877 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.2
  Lycopene_cycl 101 gvklleakvesveeeea.geslvvleggrkirarlvvdargl 141
                     v+l + +v s++ +++ +    +++ g+k ++r ++ a+g+
     KHJ32513.1 113 TVSLQNETVISIVRDDNqSSFITTVSSGQKYKSRKIILATGI 154
                    6899999*****9999945556678999***********995 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.7e-05     0.024       2      32 ..      45      75 ..      44      95 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.7e-05
                   EEEEEE--SHHHHHHHHHHHHTTHHEEEEES CS
  FAD_binding_3  2 tdVlIVGaGpaGlmlallLseaGvrvvlvek 32
                   +dV+IVG+GpaGl++ + L++   + +l++ 
     KHJ32513.1 45 YDVVIVGGGPAGLSALSSLARVRRSALLIDS 75
                   59*************9999987555666665 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   3.2e-05     0.044      18      38 ..      45      65 ..      31      74 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.2e-05
                EEEEEE--SHHHHHHHHHHHH CS
        Thi4 18 sDvvivGaGssGLtaayylak 38
                 DvvivG+G++GL+a   la+
  KHJ32513.1 45 YDVVIVGGGPAGLSALSSLAR 65
                6**************999987 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2     5e-05     0.069       1      31 [.      46      76 ..      46      79 .. 0.93
   2 ?   -2.9   0.0       2.3   3.2e+03     104     146 ..     115     155 ..      84     161 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 5e-05
  FAD_oxidored  1 DvvVvGGgpaGvaAAiaAaraGakvlLveer 31
                  Dvv+vGGgpaG+ A  + ar  ++ lL++  
    KHJ32513.1 46 DVVIVGGGPAGLSALSSLARVRRSALLIDSG 76
                  9*************************99976 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.3
  FAD_oxidored 104 vllntrlvevekegkriesvtveskegrktirAkvfiDATgdG 146
                    l n++++++++++++   +t+ s   +++++++ +i ATg  
    KHJ32513.1 115 SLQNETVISIVRDDNQSSFITTVS--SGQKYKSRKIILATGII 155
                   467788888888887755555554..25555555555555543 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.032        44       2      25 ..      44      67 ..      43      78 .. 0.80
   2 ?    6.1   0.0    0.0039       5.3     116     165 ..     118     161 ..     101     168 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.032
  K_oxygenase  2 ilDligiGiGpsnLsLailleevk 25
                  +D++++G Gp+ Ls    l+ v+
   KHJ32513.1 44 LYDVVIVGGGPAGLSALSSLARVR 67
                 59************9888888777 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0039
  K_oxygenase 116 geeveevepdeeeeeelltveskdaegeeeelearnlvlgvGtepkiPev 165
                  +e+v ++  d+++++++ tv+s       +++++r+++l++G    +P++
   KHJ32513.1 118 NETVISIVRDDNQSSFITTVSS------GQKYKSRKIILATGIIDILPDT 161
                  5778888888877667777776......78**************999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 3417.14
//
Query:       KHJ32514.1  [L=109]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 864.04
//
Query:       KHJ32515.1  [L=333]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        6.2    6.7   5.5         17    5.3   5.5    1.8  1  Suf       Suppressor of forked protein (Suf)


Domain annotation for each model (and alignments):
>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   5.5   0.00092        17     189     268 ..     213     309 ..      30     312 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.00092
         Suf 189 s.................kvpqaqeskkrklesedssvkkPdklqmvespkkgaagrrleqqrksessksaeaasksqkalqqqpaplprsivalls 268
                 s                 ++ +a+++  r++++++ s+ +P k q +++ ++ a++ +++ ++  ++s+++  ++ s+k +++++apl+ ++  +l+
  KHJ32515.1 213 SgtsaippslpcrptgplPAVPAMKNTARSTPTNKASIYHPAKNQINKTWANIAQKGHQKSPNIINISQNHSTVKISEKIINKKSAPLGGDMRLFLR 309
                 0444444457777777777788889999999999999***********999*************************************999988886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       815  (0.0454571); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.36
# Mc/sec: 2761.08
//
Query:       KHJ32516.1  [L=318]
Description: putative ribosomal small subunit assembly protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-28   99.4  12.9    1.5e-28   99.4  12.9    1.8  2  RRP7            Ribosomal RNA-processing protein 7 (RRP7) C-t
    8.9e-20   71.1   0.9    1.7e-19   70.2   0.1    1.9  3  RRM_Rrp7        Rrp7 RRM-like N-terminal domain
  ------ inclusion threshold ------
       0.15   12.4   1.9        6.3    7.3   0.1    2.7  2  ParD_antitoxin  Bacterial antitoxin of ParD toxin-antitoxin t
       0.34   11.2   0.0       0.34   11.2   0.0    2.5  3  DUF5093         Domain of unknown function (DUF5093)


Domain annotation for each model (and alignments):
>> RRP7  Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.3       3.5   1.6e+04      66      71 ..     155     160 ..     142     165 .. 0.44
   2 !   99.4  12.9   3.2e-32   1.5e-28       3     115 ..     194     310 ..     192     317 .. 0.82

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 3.5
        RRP7  66 kkekkk 71 
                 k +++k
  KHJ32516.1 155 KLQRQK 160
                 122222 PP

  == domain 2  score: 99.4 bits;  conditional E-value: 3.2e-32
        RRP7   3 srpseeelqeevdeymeefdkeeeeekkeekkkeeevDeDGfvtVtrgkkaaa.keeaaeekakkkekkkkkkkell...dFYrFQirekkkeelaeLr 97 
                 ++p+ +++q+++d++m+e+ ++++ ++++ekk ++e+D DGf+tVtrg+++ + ++e +ee+++  e++++kk+e++   +FYrFQ rek+k e++ + 
  KHJ32516.1 194 QYPNSHQIQANIDAFMTEYYTRQKSQREHEKKSRSEPDADGFITVTRGGRTGPaRKEIVEERSALLEERERKKREEMqkaGFYRFQGREKRKAEAEAMI 292
                 799********************************************8866665555555555544444444444443469****************** PP

        RRP7  98 kkFeeDkekieelkekrk 115
                 +kF+eDk+ki++l+ kr 
  KHJ32516.1 293 SKFKEDKKKIQDLRDKRS 310
                 **************9993 PP

>> RRM_Rrp7  Rrp7 RRM-like N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.2   0.1   3.8e-23   1.7e-19       5     159 ..       9     188 ..       5     191 .. 0.83
   2 ?   -2.1   0.0      0.67     3e+03      89     118 ..     204     236 ..     195     238 .. 0.48
   3 ?   -3.9   0.0       2.3     1e+04      66      86 ..     283     303 ..     275     306 .. 0.64

  Alignments for each domain:
  == domain 1  score: 70.2 bits;  conditional E-value: 3.8e-23
    RRM_Rrp7   5 FlvlPlkLpkskklknkatHYlylkkHqtknndeessrslFlvNlPiettletlkkffqkvalgatiesvvsslltdeqedvsidltkltsdlel...k 100
                 ++vl + +p+ ++ +++  H +y+++ q+k + e++srslF+vN+Pi +t ++++  ++     ++++s   s+  ++  +  i+ ++l s  e    k
  KHJ32516.1   9 YTVLNIIIPPIESFPEQCVHTMYIRRNQSKIPTENDSRSLFVVNVPIDSTSAHFRAIIGSLIGPGRFQSA--SFEDEKRTIDPIKDNNLYSTTENvgkK 105
                 8999999**************************************************************9..888887777777555554444444448 PP

    RRM_Rrp7 101 deekdeeeakl...............PkntglvkfvDkssvelafnalkKlsksstkke.Weldk........keplgsqrfl 159
                 +++++++e+ l                   +++ +vD++sv+ ++n++kKl +++++ + W++           + lgs+r+l
  KHJ32516.1 106 RKRTNDSEQSLlkqdlpnvwdrklkrSGSSAVLLLVDEKSVSKVLNTAKKLQRQKKSMRnWPIWGdnlittplIPSLGSARYL 188
                 888888888889*************9999**********************99988876776522233544544555666665 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.67
    RRM_Rrp7  89 dltkltsdlelkdeekdeeeakl...Pkntglv 118
                 ++    ++++++++++ e+e+k    P + g++
  KHJ32516.1 204 NIDAFMTEYYTRQKSQREHEKKSrsePDADGFI 236
                 445555555553333333333322236666655 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 2.3
    RRM_Rrp7  66 algatiesvvsslltdeqedv 86 
                 + +a  e+++s +++d+++++
  KHJ32516.1 283 KRKAEAEAMISKFKEDKKKIQ 303
                 556666777777777777665 PP

>> ParD_antitoxin  Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.1    0.0014       6.3      11      30 ..      60      79 ..      56      81 .. 0.94
   2 ?    3.9   0.2     0.016        72      14      57 ..     233     277 ..     227     307 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0014
                    HHHHHHHHHHHCTTS-SSHH CS
  ParD_antitoxin 11 ehfsafidsqvaaGrYgsas 30
                     hf a i s +  Gr++sas
      KHJ32516.1 60 AHFRAIIGSLIGPGRFQSAS 79
                    6******************9 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.016
                     HHHHHHHHCTTS-SSH.HHHHHHHHHHHHHHHHHHH.HHHHHHHHH CS
  ParD_antitoxin  14 safidsqvaaGrYgsa.seviraaLrLLeeretklk.aLreaLeeg 57 
                     ++fi+    +Gr g a  e++     LLeere k +  +++a   +
      KHJ32516.1 233 DGFITV-TRGGRTGPArKEIVEERSALLEERERKKReEMQKAGFYR 277
                     567765.47899998845888888889*****88651455555555 PP

>> DUF5093  Domain of unknown function (DUF5093)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.2         4   1.8e+04     107     120 ..      96     108 ..      91     112 .. 0.55
   2 ?   11.2   0.0   7.5e-05      0.34      92     130 ..     197     237 ..     185     238 .. 0.78
   3 ?   -1.4   0.4      0.61   2.7e+03     101     128 ..     253     275 ..     248     278 .. 0.52

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 4
     DUF5093 107 yektekskkkkkKk 120
                 y  te+  kk +K+
  KHJ32516.1  96 YSTTENVGKK-RKR 108
                 6666654333.333 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 7.5e-05
     DUF5093  92 dvkelekeldeameeyektekskkkkkKklve..dedGfir 130
                 + +++++++d +m ey  ++ks++++ Kk     d dGfi+
  KHJ32516.1 197 NSHQIQANIDAFMTEYYTRQKSQREHEKKSRSepDADGFIT 237
                 5679*************999998876665432239999987 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.61
     DUF5093 101 deameeyektekskkkkkKklvededGf 128
                 +e++  +e++e++k++          Gf
  KHJ32516.1 253 EERSALLEERERKKRE-----EMQKAGF 275
                 5666677777743222.....2235555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1443  (0.0804841); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2293.34
//
Query:       KHJ32517.1  [L=144]
Description: putative meiotic recombination protein dmc1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-52  177.5   0.0    3.2e-52  177.3   0.0    1.0  1  Rad51     Rad51


Domain annotation for each model (and alignments):
>> Rad51  Rad51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.3   0.0   1.8e-56   3.2e-52     117     254 ..       2     138 ..       1     139 [. 0.97

  Alignments for each domain:
  == domain 1  score: 177.3 bits;  conditional E-value: 1.8e-56
                 HHHHHHHTHHHHHHS-EEEEEEETTTGGGCH-------THHHHHHHHHHHHHHHHHHHHH--EEEEEEE-------.------.------HHHHHHHH- CS
       Rad51 117 qeellqqaaallaedkfallivDsvtalyRtdfsgrgelakRqqklgkllrtLrkladefevavvitnqvvaqvdgqaalfsa.dpkkPigGlvlahas 214
                 q+ell+++aa +a ++++lli+Ds++alyRtdf grgel++Rqq lg +lr+ +++a+ef++ v++tnqv++++++  + f++ d +kP gG+vlahas
  KHJ32517.1   2 QTELLESLAANFATNQYRLLIIDSIMALYRTDFVGRGELSERQQALGTFLRRSAQMAEEFNILVFMTNQVMSDPGA--MSFAGvDGRKPAGGHVLAHAS 98 
                 899***********************************************************************99..666666*************** PP

                 SEEEEEEE-STTEEEEEEES-SSS-S-EEEEEEETTEEE- CS
       Rad51 215 ttRlalrkgkgeeRivkvvdsPnlpeleavfaigeeGied 254
                 ttRl lrkg+geeR++k++dsP++pe+ea++ i+  Gi d
  KHJ32517.1  99 TTRLLLRKGRGEERVAKIMDSPDCPEREATYIITAGGISD 138
                 **************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       288  (0.0160634); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.29s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1085.30
//
Query:       KHJ32518.1  [L=102]
Description: hypothetical protein EV44_g4231 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-14   51.7   0.5    9.5e-14   51.6   0.5    1.0  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
       0.09   12.3   0.7       0.14   11.6   0.7    1.3  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   0.5   1.1e-17   9.5e-14     153     241 ..       9      97 ..       2      98 .. 0.90

  Alignments for each domain:
  == domain 1  score: 51.6 bits;  conditional E-value: 1.1e-17
       RVT_2 153 vrgtgegklivalyvddlliagsdikiledvkkelakkfklkdlgkvskfLGieiaq..eaggiklsladyiakvvkkfeltdaktvatPl 241
                 v+    +k+i+  +vddl+i+g+d+k +++v  +++ k kl+++g++++fLG++i    ++  ik+++++y a++++ fe  +   v  P+
  KHJ32518.1   9 VHR--ANKIIIVCHVDDLIITGPDQKQIDQVIAQISLKVKLEKIGNIHQFLGMQIEAdyKNKVIKINQNKYTASLLQRFEKETGVLVSSPV 97 
                 444..799********************************************99987567899****************998888888776 PP

>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.7   1.6e-05      0.14     157     209 ..      11      83 ..       5      99 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.6e-05
                 .....TEEECTTEEEEEESSHHH....................HHHHHHHHHHHHHHTT--BEGGG-EEE... CS
       RVT_1 157 rakgvtllrYaDDililskskee....................lqelleaveewlkesglkinpeKtklvlft 209
                 ra+++ +++ +DD++i+  ++++                    +q l   +e+  k+  +kin++K ++ l++
  KHJ32518.1  11 RANKIIIVCHVDDLIITGPDQKQidqviaqislkvklekigniHQFLGMQIEADYKNKVIKINQNKYTASLLQ 83 
                 55789***************99989999999988887777777777777777777778888888887777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1006  (0.0561102); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.20s 00:00:00.58 Elapsed: 00:00:00.35
# Mc/sec: 878.28
//
Query:       KHJ32519.1  [L=1113]
Description: putative nf-x1 type zinc finger [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-13   49.3   0.0    6.8e-13   48.4   0.0    1.5  1  R3H       R3H domain
    3.3e-08   33.4  53.1      1e-06   28.6  11.8   13.0 13  zf-NF-X1  NF-X1 type zinc finger


Domain annotation for each model (and alignments):
>> R3H  R3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   0.0   7.6e-17   6.8e-13       5      59 ..     859     914 ..     855     915 .. 0.92

  Alignments for each domain:
  == domain 1  score: 48.4 bits;  conditional E-value: 7.6e-17
                 HHHHHHHHHHH-S-.-EEE-----SHHHHHHHHHHHHSSEEEEEE--SS-SEEEEE CS
         R3H   5 rvekklaefvkdtg.rslefppmssyeRriiHelaeaygleseSvGeepkRrvvvt 59 
                   e++l  f+k+++ + l f+pm +++R +iH lae++gl seS + ep+R v + 
  KHJ32519.1 859 TYEEELLVFAKNENmKILRFKPMAPHQRAFIHSLAEDFGLCSESLDVEPHRFVSII 914
                 6899******998669*************************************886 PP

>> zf-NF-X1  NF-X1 type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.6      0.28   2.5e+03       4      10 ..     295     301 ..     294     302 .. 0.92
   2 !   11.7  14.3   2.3e-05      0.21       4      18 ..     311     325 ..     309     326 .. 0.93
   3 ?   -3.2   0.9       1.1   9.8e+03       6      10 ..     356     360 ..     355     360 .. 0.89
   4 !   18.7  15.1   1.5e-07    0.0013       1      18 [.     366     383 ..     366     384 .. 0.97
   5 !    9.2   4.9   0.00014       1.2       1      13 [.     434     448 ..     434     449 .. 0.91
   6 !   11.5  13.3   2.7e-05      0.25       1      19 []     500     517 ..     500     517 .. 0.97
   7 ?   -4.1   6.6         2   1.8e+04       7      14 ..     532     539 ..     526     550 .. 0.70
   8 !    8.0   8.8   0.00034         3       1      14 [.     555     568 ..     555     568 .. 0.97
   9 ?   -3.0   1.0      0.91   8.2e+03       4      10 ..     598     604 ..     597     604 .. 0.90
  10 !   28.6  11.8   1.2e-10     1e-06       1      18 [.     610     627 ..     610     628 .. 0.99
  11 ?   -4.5   3.2         2   1.8e+04       1       6 [.     667     676 ..     667     678 .. 0.77
  12 !   16.6  10.2     7e-07    0.0063       1      18 [.     723     745 ..     723     750 .. 0.80
  13 ?   -0.1   9.7      0.11     1e+03       1      18 [.     749     776 ..     749     777 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.28
    zf-NF-X1   4 HkCeklC 10 
                 H C ++C
  KHJ32519.1 295 HSCGQTC 301
                 9999999 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 2.3e-05
    zf-NF-X1   4 HkCeklCHeGpCppC 18 
                 H Ce++CH GpC pC
  KHJ32519.1 311 HPCESICHAGPCAPC 325
                 9************** PP

  == domain 3  score: -3.2 bits;  conditional E-value: 1.1
    zf-NF-X1   6 CeklC 10 
                 Cek+C
  KHJ32519.1 356 CEKIC 360
                 ****9 PP

  == domain 4  score: 18.7 bits;  conditional E-value: 1.5e-07
    zf-NF-X1   1 CGrHkCeklCHeGpCppC 18 
                 CG HkC k+CHeG C+ C
  KHJ32519.1 366 CGEHKCRKICHEGKCGDC 383
                 *****************9 PP

  == domain 5  score: 9.2 bits;  conditional E-value: 0.00014
    zf-NF-X1   1 CG..rHkCeklCHeG 13 
                 CG  +H Cek+CH+ 
  KHJ32519.1 434 CGnpKHFCEKTCHKQ 448
                 99999********85 PP

  == domain 6  score: 11.5 bits;  conditional E-value: 2.7e-05
    zf-NF-X1   1 CGrHkCeklCHeGpCppCp 19 
                 CG H C+++CH G C+ C+
  KHJ32519.1 500 CG-HLCKQKCHRGKCGFCR 517
                 **.**************96 PP

  == domain 7  score: -4.1 bits;  conditional E-value: 2
    zf-NF-X1   7 eklCHeGp 14 
                 e lCH G+
  KHJ32519.1 532 ETLCHQGD 539
                 6799*997 PP

  == domain 8  score: 8.0 bits;  conditional E-value: 0.00034
    zf-NF-X1   1 CGrHkCeklCHeGp 14 
                 CGrH C++ C++G+
  KHJ32519.1 555 CGRHECSSRCCPGE 568
                 *************6 PP

  == domain 9  score: -3.0 bits;  conditional E-value: 0.91
    zf-NF-X1   4 HkCeklC 10 
                 H C k+C
  KHJ32519.1 598 HICLKVC 604
                 99****9 PP

  == domain 10  score: 28.6 bits;  conditional E-value: 1.2e-10
    zf-NF-X1   1 CGrHkCeklCHeGpCppC 18 
                 CG+H+C++lCH+GpCp+C
  KHJ32519.1 610 CGNHTCSALCHKGPCPSC 627
                 ****************** PP

  == domain 11  score: -4.5 bits;  conditional E-value: 2
    zf-NF-X1   1 CG....rHkC 6  
                 CG    +H+C
  KHJ32519.1 667 CGhsmiKHQC 676
                 8877778888 PP

  == domain 12  score: 16.6 bits;  conditional E-value: 7e-07
    zf-NF-X1   1 CGrHkCeklCH.eGpC....ppC 18 
                 CG+H C+k CH +G+C     pC
  KHJ32519.1 723 CGIHDCQKSCHrDGQCedtnIPC 745
                 ****************6554155 PP

  == domain 13  score: -0.1 bits;  conditional E-value: 0.11
    zf-NF-X1   1 CG......rHkCeklCH.eGpC...ppC 18 
                 CG       H C + CH + pC   +pC
  KHJ32519.1 749 CGrkrtvcEHSCLSQCHaPYPCketQPC 776
                 666666668********999**877799 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       870  (0.0485247); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.42
# Mc/sec: 7915.12
//
Query:       KHJ32520.1  [L=1027]
Description: hypothetical protein EV44_g0038 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0003   20.7   0.1    0.00089   19.2   0.1    1.9  1  Cytokin_check_N  Cdc14 phosphatase binding protein N-terminus


Domain annotation for each model (and alignments):
>> Cytokin_check_N  Cdc14 phosphatase binding protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.1     5e-08   0.00089       2      68 ..      29      93 ..      28      96 .. 0.92

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 5e-08
  Cytokin_check_N  2 kkFLhltdpsntleelseeiverfkklYPdeeeleIlslqdenecDLDpdflvkdvFesdnlvrvil 68
                     + F + t+p+nt+ e ++e ++  +  Y +  +l I ++qd++++D+ +  ++++ F++++++rv+ 
       KHJ32520.1 29 RNFRVVTSPENTIREFCQEASRIHEINYGH--PLVIKKVQDDQSFDVTQSEILGNLFSTSSIIRVVQ 93
                     568889**************9999999975..8********************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1027 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2411  (0.134475); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.98u 0.31s 00:00:01.29 Elapsed: 00:00:00.47
# Mc/sec: 6625.03
//
Query:       KHJ32521.1  [L=170]
Description: hypothetical protein EV44_g3645 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       334  (0.018629); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1257.55
//
Query:       KHJ32522.1  [L=441]
Description: putative f-box tpr repeat containing protein pof3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-05   24.8   1.8    1.4e-05   24.8   1.8    2.1  2  F-box       F-box domain
    9.4e-05   22.2   1.7    9.4e-05   22.2   1.7    1.9  2  F-box-like  F-box-like
    0.00011   22.5  12.2        2.3    8.8   0.0    6.5  8  LRR_4       Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
       0.14   12.0   9.4        3.9    7.3   0.0    5.3  6  LRR_8       Leucine rich repeat


Domain annotation for each model (and alignments):
>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   1.8   3.2e-09   1.4e-05       2      46 ..      17      61 ..      16      63 .. 0.93
   2 ?   -2.4   0.0       1.1   4.8e+03       8      20 ..     134     149 ..     129     150 .. 0.67

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 3.2e-09
                HHHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHHH CS
       F-box  2 tlsrLPsevlrhILerLplsdllalrrVSkgwrilidsdrlwcks 46
                ++  LP+e+ ++I   L+  d++++  V+k+w+i++ s++  +k+
  KHJ32522.1 17 PFYHLPLELAEKICLMLNIQDRVSCLYVCKSWNIMLESLNSLWKI 61
                7899*********************************99988876 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.1
                 HH...HHHHHHHTS-H CS
       F-box   8 se...vlrhILerLpl 20 
                 s+     +hI+ + p 
  KHJ32522.1 134 SAkkiMKLHIFDHIPM 149
                 5555556899999886 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   1.7   2.1e-08   9.4e-05       3      46 ..      20      63 ..      18      65 .. 0.93
   2 ?   -2.7   0.1       1.3   5.7e+03      10      19 ..     141     150 ..     140     159 .. 0.80

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 2.1e-08
  F-box-like  3 rLPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrrlv 46
                +LP E+  +I   L+ +d +++  VC++W+ +  +  +LW+ l 
  KHJ32522.1 20 HLPLELAEKICLMLNIQDRVSCLYVCKSWNIMLESLNSLWKILD 63
                9********************************9999***9665 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.3
  F-box-like  10 lqIFsyLpps 19 
                 l+IF+++p s
  KHJ32522.1 141 LHIFDHIPMS 150
                 7999988755 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       1.4   6.5e+03      26      30 ..      60      64 ..      47      68 .. 0.51
   2 ?   -2.0   0.0       1.3   5.6e+03      19      30 ..     107     118 ..      92     121 .. 0.66
   3 ?    4.4   0.2     0.012        53      17      31 ..     182     195 ..     172     206 .. 0.77
   4 ?    0.8   0.1      0.16   7.2e+02       2       9 ..     188     195 ..     187     235 .. 0.51
   5 !    8.8   0.0   0.00051       2.3       1      34 [.     245     276 ..     245     288 .. 0.85
   6 ?    3.1   0.0     0.031   1.4e+02       2      32 ..     266     301 ..     265     307 .. 0.76
   7 ?    2.3   0.1     0.056   2.5e+02      24      39 ..     321     334 ..     316     339 .. 0.68
   8 !    8.5   0.0   0.00061       2.8       1      19 [.     374     394 ..     374     413 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.4
                -EEE- CS
       LRR_4 26 keLdL 30
                k LdL
  KHJ32522.1 60 KILDL 64
                23334 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.3
                 HHH-TT--EEE- CS
       LRR_4  19 leklpnLkeLdL 30 
                 ++++  LkeL +
  KHJ32522.1 107 IQNCICLKELKV 118
                 335778888765 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.012
                 S-HHH-TT--EEE-. CS
       LRR_4  17 plleklpnLkeLdLs 31 
                 ++++ l nLk+L+L 
  KHJ32522.1 182 EWPR-LHNLKSLSLG 195
                 5688.********92 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.16
                 S--EEE-- CS
       LRR_4   2 nLevLdLs 9  
                 nL++L+L+
  KHJ32522.1 188 NLKSLSLG 195
                 44444444 PP

  == domain 5  score: 8.8 bits;  conditional E-value: 0.00051
                 SS--EEE--SS---E-S-HHH-TT.--EEE-.-S- CS
       LRR_4   1 pnLevLdLsnNqltdiplleklpn.LkeLdLsgNn 34 
                 ++L+ L L n++l  +p    lp+ L++L+  gN 
  KHJ32522.1 245 KQLQRLELVNTKLERFPQ---LPQtLRYLSFDGNY 276
                 58*************666...**********9993 PP

  == domain 6  score: 3.1 bits;  conditional E-value: 0.031
                 S--EEE--SS.---E-S-.....HHH-TT--EEE-.- CS
       LRR_4   2 nLevLdLsnN.qltdipl.....leklpnLkeLdLsg 32 
                  L++L++ +N  l+ ip      l +lp L+++++  
  KHJ32522.1 266 TLRYLSFDGNyALS-IPHshekdLTQLPLLESFSCQA 301
                 68999999998899.99976666668999**999943 PP

  == domain 7  score: 2.3 bits;  conditional E-value: 0.056
                 T--EEE-.-S-----G CS
       LRR_4  24 nLkeLdLsgNnlitdl 39 
                 nLk+L+L g  +i dl
  KHJ32522.1 321 NLKTLHL-GS-RIYDL 334
                 7777777.54.44444 PP

  == domain 8  score: 8.5 bits;  conditional E-value: 0.00061
                 SS--EEE--SS---E-S-..H CS
       LRR_4   1 pnLevLdLsnNqltdipl..l 19 
                 p+Le + Ls+N++t++ l  l
  KHJ32522.1 374 PKLERVILSGNRITELTLqtL 394
                 79************9977554 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.2         1   4.5e+03      28      58 ..      60      66 ..      51      68 .. 0.48
   2 ?    2.8   0.0     0.022        98      23      50 ..     185     214 ..     180     217 .. 0.74
   3 ?    0.7   0.1       0.1   4.5e+02      26      39 ..     246     259 ..     220     275 .. 0.67
   4 ?    2.0   0.0     0.039   1.7e+02       2      29 ..     266     293 ..     265     295 .. 0.85
   5 ?   -1.8   0.1       0.6   2.7e+03      26      32 ..     321     327 ..     317     329 .. 0.47
   6 ?    7.3   0.0   0.00087       3.9      26      54 ..     375     403 ..     373     408 .. 0.53

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1
                -EEE--SS---GGGGGGGTT--S-.EEE--S CS
       LRR_8 28 kvLdLsnNllttlspgafsgLpsLrsLdLsg 58
                k+LdLs                        +
  KHJ32522.1 60 KILDLS------------------------H 66
                334444........................4 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.022
                 T-TT--EEE--SS..---GGGGGGGTT--S CS
       LRR_8  23 glsnLkvLdLsnN..llttlspgafsgLps 50 
                 +l+nLk+L+L++    +++ ++ga+ +L  
  KHJ32522.1 185 RLHNLKSLSLGESsgFISRDNEGAIIDLGG 214
                 499*******99855577777777766655 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.1
                 T--EEE--SS---G CS
       LRR_8  26 nLkvLdLsnNlltt 39 
                 +L+ L+L n +l++
  KHJ32522.1 246 QLQRLELVNTKLER 259
                 44444444444444 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.039
                 T-SEEE-TTS--SEE-TTSSTT-TT--E CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkglsnLkv 29 
                 +L++L+ + N+  s++ +  k+l++L  
  KHJ32522.1 266 TLRYLSFDGNYALSIPHSHEKDLTQLPL 293
                 6999999999999999999999998865 PP

  == domain 5  score: -1.8 bits;  conditional E-value: 0.6
                 T--EEE- CS
       LRR_8  26 nLkvLdL 32 
                 nLk+L+L
  KHJ32522.1 321 NLKTLHL 327
                 3444443 PP

  == domain 6  score: 7.3 bits;  conditional E-value: 0.00087
                 T--EEE--SS---GGGGGGGTT--S-.EE CS
       LRR_8  26 nLkvLdLsnNllttlspgafsgLpsLrsL 54 
                 +L+   Ls N++t l  ++++g +s++s+
  KHJ32522.1 375 KLERVILSGNRITELTLQTLAGKRSIKSI 403
                 45555555555555555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3204.64
//
Query:       KHJ32523.1  [L=612]
Description: putative peptidase family m20 m25 m40 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.011   16.3   0.1       0.04   14.4   0.1    2.0  1  PH        PH domain


Domain annotation for each model (and alignments):
>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.1   2.2e-06      0.04      16     104 ..     256     369 ..     244     370 .. 0.53

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.2e-06
                 C..SEEEEEEEEETTE.EEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEE........................EESTSSS...TEEEE CS
          PH  16 k..swkkrwfvLkdse.llyykndksekdkepkgsislsncevvevvatedpkrkfcfel........................riverng...srtyl 84 
                 +   w ++ fvL +s  ll y+ + +  d  p +++ l + +v     ++ p++++++++                             ++    +++l
  KHJ32523.1 256 TsaEWTQKIFVLVTSGyLLQYSGS-GRNDRMPEKILQLGKDSVA-FASDAIPGKHWVLQVsqsmspdgtstpncrslfsrinfrA---MDHrkiAKSLL 349
                 356788777777744447767766.2233333333333222222.2212244444444444444444444444444467665442...2223345**** PP

                 EEESSHHHHHHHHHHHHHHH CS
          PH  85 lqasseeerkeWikaiqsai 104
                 l +++++++++Wi+++++ i
  KHJ32523.1 350 LVFDNADDLESWIYTLRREI 369
                 ****************9977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (612 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       712  (0.0397122); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 4352.55
//
Query:       KHJ32524.1  [L=316]
Description: hypothetical protein EV44_g5488 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-18   66.1   0.4    4.7e-14   52.4   0.6    2.4  2  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase
     0.0026   18.0   0.1     0.0059   16.8   0.1    1.5  1  DUF262    Protein of unknown function DUF262


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   1.2e-05      0.11       2      95 ..      91     157 ..      90     159 .. 0.81
   2 !   52.4   0.6   5.3e-18   4.7e-14     141     222 .]     158     231 ..     154     231 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.2e-05
                 E-TT.S-EEE.......-THHHHCTB--.........-------HHHH.............HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-E CS
       RVT_1   2 pKkgpgsyRp.isllsvdykalnkliakrLkdvlekllsenqpgfrpgrstldavedllkalkkkkkaklllklDlkkaFdsvpleellrkltaf 95 
                 +K+g g+ R  +     dy a+n+++ +          ++++p +++              l++  k+++++k+D++  F++ +++e +++++af
  KHJ32524.1  91 KKPG-GGLRFcV-----DYLAFNAITGE---------GQYPLPLIKET-------------LRSISKSTYITKVDVRATFHKLSVREGDEEKNAF 157
                 6777.7777744.....77777777777.........77777777777.............7888*************************99997 PP

  == domain 2  score: 52.4 bits;  conditional E-value: 5.3e-18
                 HHHHHHHHHHHTT-T......TEEECTTEEEEEESS.HHHHHHHHHHHHHHHHHTT--BEGGG-EEE.....ESSEEETTEEE CS
       RVT_1 141 llfnlfmnellrelrkrakgvtllrYaDDililsks.keelqelleaveewlkesglkinpeKtklvlftvkseevkyLGvtl 222
                 l f++++ne l ++      v++++Y DDi+i++++  +++ + +++v+++l+++glk+np+K++++      ++ kyLG+ +
  KHJ32524.1 158 LAFQRYVNETLVDYLD----VYCTAYLDDIFIYTSEsLKDHWQKIQTVFKRLNKAGLKLNPKKCEFA-----VKTTKYLGFVI 231
                 789********99998....9************9998999***************************.....8*******975 PP

>> DUF262  Protein of unknown function DUF262
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   6.6e-07    0.0059     132     212 ..     132     214 ..     111     216 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 6.6e-07
      DUF262 132 eelaelnsltkkdlakeekrneeknlikayevieeilksallsalktklslieielese..ddedqayeiFerlNsrGvpLta 212
                    + +  +t+++l+++e ++e++ +++  ++ +e l ++l  ++  +l+ i+i+++++  d  ++++++F+rlN+ G++L++
  KHJ32524.1 132 YITKVDVRATFHKLSVREGDEEKNAFLAFQRYVNETLVDYLDVYCTAYLDDIFIYTSESlkDHWQKIQTVFKRLNKAGLKLNP 214
                 34455667899999*********************9999877777655666666666555755667***************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       641  (0.0357521); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2383.88
//
Query:       KHJ32525.1  [L=293]
Description: putative ribosomal rna-processing protein 15 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-34  118.8  12.9      2e-34  118.8  12.9    2.6  2  Rrp15p    Rrp15p


Domain annotation for each model (and alignments):
>> Rrp15p  Rrp15p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.8   8.8         1   1.8e+04      44      77 ..      22      55 ..       3     123 .. 0.65
   2 !  118.8  12.9   1.1e-38     2e-34       1     133 [.     126     278 ..     126     279 .. 0.97

  Alignments for each domain:
  == domain 1  score: -5.8 bits;  conditional E-value: 1
      Rrp15p 44 kakkqlrkekkekeekgrvk..dviggwtlekErrl 77
                 ++ +l+k++k+  e  +    d  +   +++E++l
  KHJ32525.1 22 TQDCRLTKKRKKTSENYHLSedDNSER--TKTEKTL 55
                333333444444444444443222221..3444444 PP

  == domain 2  score: 118.8 bits;  conditional E-value: 1.1e-38
      Rrp15p   1 fadamskilssklsekkkkkpiLskakkaekkakkiedekleakakkqlrkekkekeekgrvkdviggwt....................lekErrlrk 79 
                 fa++mskilsskls+ k+++p+L+++++a   +k+++d+kle+ ak++ r+ kk + +kgrv dv+g++                     +ekEr+l+k
  KHJ32525.1 126 FATSMSKILSSKLSSLKRNDPVLARSAQAIYISKQATDAKLESLAKRKIRADKKDALKKGRVVDVLGTNLasensvtsnkettknssqsiMEKERKLKK 224
                 899****************************************************************766***************************** PP

      Rrp15p  80 vAtrGVVkLFNAvraaQkkvekelaeaeelek.lgekkkekvlkelsKekFLdll 133
                 +A+rGV+kLFNAvraaQ k e++++ea++  + +++k+ke++++e+sK++FLdl+
  KHJ32525.1 225 IAQRGVIKLFNAVRAAQIKGEEAAREAKAI-GiVSQKNKEEKINEMSKKGFLDLI 278
                 **************************9665.669*******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1933  (0.107814); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2112.19
//
Query:       KHJ32526.1  [L=153]
Description: putative sucrose transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1206.35
//
Query:       KHJ32527.1  [L=433]
Description: putative 20s-pre-rrna d-site endonuclease nob1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.4e-32  109.5   4.9      7e-32  109.4   3.6    1.8  2  NOB1_Zn_bind  Nin one binding (NOB1) Zn-ribbon like
    2.5e-30  104.8   0.1    7.1e-30  103.4   0.1    1.8  1  PIN_6         PIN domain of ribonuclease
  ------ inclusion threshold ------
      0.024   14.1   0.0      0.036   13.5   0.0    1.2  1  Peptidase_S9  Prolyl oligopeptidase family
        2.3    8.6   6.4        5.1    7.5   4.5    2.3  2  Rpr2          RNAse P Rpr2/Rpp21/SNM1 subunit domain


Domain annotation for each model (and alignments):
>> NOB1_Zn_bind  Nin one binding (NOB1) Zn-ribbon like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.7   1.2e+04      43      62 ..     224     243 ..     221     250 .. 0.71
   2 !  109.4   3.6   1.6e-35     7e-32       1      72 []     284     355 ..     284     355 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.7
  NOB1_Zn_bind  43 engelklhlkknfqlnlrGt 62 
                   ++g +k    k+fq n rG 
    KHJ32527.1 224 DEGWIKHSNLKRFQENDRGV 243
                   55667777778899999985 PP

  == domain 2  score: 109.4 bits;  conditional E-value: 1.6e-35
  NOB1_Zn_bind   1 ikrvkswvlrChaCfkvtkdmtkkFCpkCGnktLkrvavsvdengelklhlkknfqlnlrGtkyslpkpkgg 72 
                   i+++++wvlrChaCfk+tk+m+++FC+ CG++tL rva+s++ +g++klhlkkn+q+n+rG++ys+pkp+gg
    KHJ32527.1 284 ISNLRTWVLRCHACFKITKNMERQFCECCGKPTLLRVACSTNTDGSFKLHLKKNMQWNTRGNVYSIPKPRGG 355
                   789******************************************************************998 PP

>> PIN_6  PIN domain of ribonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.4   0.1   1.6e-33   7.1e-30       1      89 []       4      95 ..       4      95 .. 0.98

  Alignments for each domain:
  == domain 1  score: 103.4 bits;  conditional E-value: 1.6e-33
       PIN_6  1 lVlDagalikn..slsslqnlaeklyttpeVvaEirdkkarerlellpl.elevrePspesvkkvtefakktGDlsvLSktDievlALtyeL 89
                l++D+g++ikn  ++s+l ++ae lyt+p V++Eird+++r+rle+  + +l+vr P+++svk++++fa+ktGDl+vLS+tDi+++ALtye+
  KHJ32527.1  4 LIVDSGPIIKNdpPISTLLSQAEALYTVPLVLEEIRDANTRSRLEISLMpFLKVRIPKQASVKVIQDFARKTGDLEVLSRTDIHLMALTYEI 95
                89**********99********************************9988****************************************96 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0     8e-06     0.036       2      56 ..     333     388 ..     332     399 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 8e-06
                   ---HHHHHHHCCT-EEEEE--TTSSTTHCHHHHTTSGGGGHHHH..HHHHHHHHHHH CS
  Peptidase_S9   2 sfsselqlladrGyvvvvanirGsggyGeafhdagkrklgqnef..dDfiaaaeala 56 
                   ++++++q+   rG v+ ++ +rG++  G+  ++  k+++g+n +  +D+ + ++al 
    KHJ32527.1 333 HLKKNMQWN-TRGNVYSIPKPRGGNSSGKLAAETRKGDWGSNLIlaEDQKEYVKALR 388
                   567899999.*******************************9743388888888885 PP

>> Rpr2  RNAse P Rpr2/Rpp21/SNM1 subunit domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.34   1.5e+03      13      37 ..     161     185 ..      58     194 .. 0.77
   2 ?    7.5   4.5    0.0011       5.1      34      72 ..     295     333 ..     264     350 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.34
                 HHHH-HHHHHHHHHHHHHHHHHCT- CS
        Rpr2  13 laeaspalsrylakqlrevskkaql 37 
                 ++e+s  ls +l ++++++s  +q 
  KHJ32527.1 161 NQESSALLSTSLQDSFKKISLSSQE 185
                 4455556788888888888666554 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0011
                 HCT---SSTCCCTB-TTT--B--CTTTEEEEEE-SSS-E CS
        Rpr2  34 kaqlrlppsvkrtvCkkCgsvlipgvtcsvrvenkskkk 72 
                 +a  ++ ++++r++C++Cg+  +  v cs+++  + k +
  KHJ32527.1 295 HACFKITKNMERQFCECCGKPTLLRVACSTNTDGSFKLH 333
                 4556899**********************9996544333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 3085.43
//
Query:       KHJ32528.1  [L=486]
Description: putative signal recognition particle protein srp54 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.2e-76  253.8   0.7    2.7e-75  252.3   0.7    1.7  2  SRP54            SRP54-type protein, GTPase domain
    1.5e-32  112.2   1.5    1.5e-32  112.2   1.5    2.9  2  SRP_SPB          Signal peptide binding domain
    3.7e-22   78.3   1.3    1.6e-21   76.3   0.7    2.4  2  SRP54_N          SRP54-type protein, helical bundle domain
    7.4e-06   25.7   1.4    6.8e-05   22.5   1.1    2.5  2  cobW             CobW/HypB/UreG, nucleotide-binding domain
    1.5e-05   25.2   0.0      3e-05   24.2   0.0    1.6  1  AAA_33           AAA domain
    2.2e-05   24.9   0.1    6.1e-05   23.5   0.1    1.8  1  AAA_17           AAA domain
    5.8e-05   23.5   0.0    0.00011   22.6   0.0    1.5  1  AAA_16           AAA ATPase domain
    0.00015   21.2   1.1        1.7    8.1   0.1    3.3  3  SRPRB            Signal recognition particle receptor beta su
    0.00091   18.6   0.0     0.0018   17.6   0.0    1.5  1  Zeta_toxin       Zeta toxin
     0.0013   17.8   0.1     0.0054   15.7   0.1    2.0  1  MeaB             Methylmalonyl Co-A mutase-associated GTPase 
     0.0021   17.8   0.1     0.0076   16.0   0.0    2.0  1  AAA_30           AAA domain
     0.0025   17.9   0.0      0.013   15.5   0.0    2.1  1  CbiA             CobQ/CobB/MinD/ParA nucleotide binding domai
     0.0034   17.3   0.0     0.0071   16.2   0.0    1.5  1  APS_kinase       Adenylylsulphate kinase
     0.0046   17.0   0.2      0.012   15.6   0.2    1.6  1  ResIII           Type III restriction enzyme, res subunit
     0.0047   17.5   0.0      0.011   16.3   0.0    1.7  1  AAA_18           AAA domain
     0.0062   16.8   0.1      0.024   14.9   0.0    2.2  1  AAA_22           AAA domain
     0.0092   15.7   0.0       0.03   14.0   0.0    1.9  1  Thymidylate_kin  Thymidylate kinase
     0.0092   15.8   0.3      0.031   14.1   0.0    2.0  2  ATP_bind_1       Conserved hypothetical ATP binding protein
     0.0094   16.0   0.4      0.052   13.6   0.1    2.4  1  MMR_HSR1         50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.013   15.7   0.1      0.025   14.8   0.1    1.5  1  AAA_28           AAA domain
      0.031   13.7   0.2       0.48    9.9   0.0    2.5  3  Arf              ADP-ribosylation factor family
      0.037   13.9   0.0      0.092   12.7   0.0    1.7  1  MobB             Molybdopterin guanine dinucleotide synthesis
      0.047   14.0   0.0        0.1   12.9   0.0    1.6  1  AAA_19           AAA domain
       0.07   13.6   0.4       0.37   11.2   0.4    2.4  1  AAA              ATPase family associated with various cellul
       0.11   11.8   0.0       0.19   11.0   0.0    1.4  1  6PF2K            6-phosphofructo-2-kinase
       0.11   11.9   0.0       0.39   10.2   0.0    1.9  1  AAA_7            P-loop containing dynein motor region


Domain annotation for each model (and alignments):
>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  252.3   0.7   3.9e-78   2.7e-75       2     196 .]     102     296 ..     101     296 .. 0.99
   2 ?   -1.9   0.0         3   2.1e+03     101     138 ..     357     394 ..     348     400 .. 0.83

  Alignments for each domain:
  == domain 1  score: 252.3 bits;  conditional E-value: 3.9e-78
                 EEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEEESTSSTTHHHHHHHHHHHTTEEEEESSTTSCHHHHHHHHHHHHHHTTSSEEEEEE--SSTTHHH CS
       SRP54   2 nvillvGlqGaGKTttlaKLaallkkegkkvllvaaDtfRaaAveQLktlaeklgvpvikkkeeadpaavakeavekakeekidvvlvDTaGrlqndke 100
                 n+i++vGlqGaGKTtt++KLa++++++g k +lv+aDtfRa+A++QLk++a+k+++p++++ +++dpa va+e+vek+k+ k+++++vDT+Gr++++++
  KHJ32528.1 102 NIIMFVGLQGAGKTTTCTKLARHYESRGFKSCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQSDPAVVAREGVEKFKKAKFEIIIVDTSGRHRQESA 200
                 79************************************************************************************************* PP

                 HHHHHHHHHHHHSSSEEEEEEETTBHTHHHHHHHHHHHHSSCSEEEEESTTSSSSTTHHHHHHHHHTS-EEEEE-SSSTTGEEE--HHHHHHHHHT CS
       SRP54 101 lmeelkkikkvvkpdevllvldattgqeavkqakaFkeavgitgviltklDgdakgGaalsiaaelklPikfigvGekiedleefdperlvsrllg 196
                 l+ee+k+i+k+v pd++++vld+++gq+a +q kaFkea++++++i+tk Dg+a+gG+a+s++a++++Pi+fig+Ge+i dle+f p+++vs+llg
  KHJ32528.1 201 LFEEMKDIQKAVLPDQTIMVLDSSIGQQAEAQSKAFKEAANFGSIIITKTDGHASGGGAISAVAATQTPIIFIGTGEHIFDLERFAPQQFVSKLLG 296
                 **********************************************************************************************95 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 3
                 HHHHHHHHHHHHSSSEEEEEEETTBHTHHHHHHHHHHH CS
       SRP54 101 lmeelkkikkvvkpdevllvldattgqeavkqakaFke 138
                 lm+ +++ +  +k +++++++d++t +e  +  k F +
  KHJ32528.1 357 LMQGMDDEEGSAKLKRMIYICDSMTVKELESDGKLFTN 394
                 78888888899999999*******99998888888865 PP

>> SRP_SPB  Signal peptide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       2.3   1.6e+03       2      29 ..     280     309 ..     279     322 .. 0.66
   2 !  112.2   1.5   2.1e-35   1.5e-32       2      98 ..     326     426 ..     325     427 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 2.3
                 SCTHHHHHH..HHHHHCCCCCCHHHHCCC. CS
     SRP_SPB   2 ftlrdlleq..lqqikkmGplskllsmiPg 29 
                 f+l+ +  q  ++++  mG+++ l++ +  
  KHJ32528.1 280 FDLERFAPQqfVSKLLGMGDMQGLFEHVKS 309
                 556666543236788999999999987765 PP

  == domain 2  score: 112.2 bits;  conditional E-value: 2.1e-35
                 SCTHHHHHHHHHHHCCCCCCHHHHCCC.......H...CCCCCHHHHHHHHHTTSBHHHHHSGCG-..H..HHHHHHHHHTTS-HHHHHHHHHHHHHHH CS
     SRP_SPB   2 ftlrdlleqlqqikkmGplskllsmiPgmsae..akaeeeaekklkrieaiidSMTkeErdspekllke..sRkrRiArGsGtsvqevnellkqfeqmk 96 
                 ftlrdl++ql++i+kmGplsk+++miPgm+    + ++ee++ klkr+ +i dSMT +E++s++kl+++  +R++RiArGsGtsv+ev+ell+q++ m+
  KHJ32528.1 326 FTLRDLRDQLSNIMKMGPLSKMAGMIPGMGGLmqGMDDEEGSAKLKRMIYICDSMTVKELESDGKLFTNepTRVTRIARGSGTSVREVEELLAQHKIMA 424
                 9***************************987776344577889************************8558***************************9 PP

                 HH CS
     SRP_SPB  97 km 98 
                 +m
  KHJ32528.1 425 SM 426
                 98 PP

>> SRP54_N  SRP54-type protein, helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.3   0.7   2.4e-24   1.6e-21       1      75 []       6      83 ..       6      83 .. 0.97
   2 ?   -1.4   0.0         4   2.7e+03      27      53 ..     410     436 ..     408     456 .. 0.69

  Alignments for each domain:
  == domain 1  score: 76.3 bits;  conditional E-value: 2.4e-24
                HHHHHHHHHHHHCCSSCGHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHCTTS....S-HHHHHHHHHHHHH CS
     SRP54_N  1 LgkklnsalkklsgkskideedleealkeleeaLleaDVgvkvvkklienvkkkavgekk....lkpkqqvkkivkdeL 75
                Lg+++n+a+++l+++s++de+++++++ke++ aLleaDV+vk+v +l++++k+ +v+ k+    +++k+ ++k+v+deL
  KHJ32528.1  6 LGRRINAAVNNLTSSSSLDEKAFNAMIKEICAALLEADVNVKLVGNLRKSIKN-TVNFKDlspgVNKKRLIQKAVFDEL 83
                89*************************************************77.999899999999************8 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 4
                 HHHHHHHHHHTT--HHHHHHHHHHHHH CS
     SRP54_N  27 lkeleeaLleaDVgvkvvkklienvkk 53 
                 ++e+ee L +  +  +++kkl  n k+
  KHJ32528.1 410 VREVEELLAQHKIMASMAKKLGGNMKN 436
                 578999998888888888888777755 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   1.1   9.9e-08   6.8e-05       3     153 ..     104     253 ..     102     268 .. 0.70
   2 ?   -2.8   0.0         6   4.1e+03     109     124 ..     367     382 ..     358     405 .. 0.65

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 9.9e-08
                 EEEEESTTCCHHHHHHHHH..CT--SS-EEEEESS-SSCHCCCCCCHCCCT.EEEETTTTECCHCTT-HHHHHHHHHHHH.TT-SEEEEEECTTTTHHH CS
        cobW   3 tvltGflGsGKTtLlnhll..enraglklavivNefgevsiDaellretgveivelenGciCctlredllkelealeere.erldviliEttGlaePap 98 
                 ++++G  G+GKTt  ++l    +++g k  ++  +    +   +l +++++++     G +  +  + ++ + e +e+ + +++++i++ t+G      
  KHJ32528.1 104 IMFVGLQGAGKTTTCTKLArhYESRGFKSCLVCADTFRAGAFDQL-KQNATKAKIPYYGSLTQS--DPAVVAREGVEKFKkAKFEIIIVDTSGRHRQES 199
                 678999999999999999977555666777777776654443333.333344444456777655..45554444444433356**********777777 PP

                 HHTT.SHHHHHCCCECEEEEEEETTTH.CCHCCHHHHHHHHHHTSSEEEEE-HHHH CS
        cobW  99 vaft.eeelksdltldavvavvDaknleaeeekieekaedqlaaadllvlnKtDll 153
                  +f+  +++++++  d +++v+D+  + ++ e +++ +++  ++   ++++KtD  
  KHJ32528.1 200 ALFEeMKDIQKAVLPDQTIMVLDS-SIGQQAEAQSKAFKEAANFG-SIIITKTDGH 253
                 6677799*****************.55567777777776666665.57889**965 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 6
                 CCCECEEEEEEETTTH CS
        cobW 109 dltldavvavvDaknl 124
                 +++l+ ++++ D+  +
  KHJ32528.1 367 SAKLKRMIYICDSMTV 382
                 5566777777777655 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   4.4e-08     3e-05       1      90 [.     103     203 ..     103     240 .. 0.77

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 4.4e-08
      AAA_33   1 lvllvGlpGsGKstlaerllkklg.....avllssdtlrrrlfgtdqqskt.....dytrvldr.lyqilnelarkalsagrnvildatnlsrrerarf 88 
                 ++++vGl+G+GK+t  ++l+++        +l+  dt+r   f + +q+ t     +y  ++++      +e ++k  +a++ +i+  t  ++r+ +++
  KHJ32528.1 103 IIMFVGLQGAGKTTTCTKLARHYEsrgfkSCLVCADTFRAGAFDQLKQNATkakipYYGSLTQSdPAVVAREGVEKFKKAKFEIIIVDTSGRHRQESAL 201
                 59***************9988877888*************99997777666666665555555432225567788888999998888887777666555 PP

      AAA_33  89 lk 90 
                 ++
  KHJ32528.1 202 FE 203
                 54 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.1   8.9e-08   6.1e-05       1     110 [.     107     223 ..     107     235 .. 0.76

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 8.9e-08
                 EE-TTSSHHHHHHHHHHHH...TEE.EEEHHHHHHHHHHTT.TSHSSHHHHC...TSHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-SEEEETTEEEES CS
      AAA_17   1 lGgPGsGKgtqceklveky...gft.hlsaGdllreeakrg.glakardemr...klpleekkelqkeaaekiaeeakkkgvlvdghprikeqagfldg 91 
                 +G+ G+GK+t c kl+++y   gf+  l   d +r+ a ++ + + ++ ++     l +++   + +e  ek +++ k + ++vd+  r ++++ ++++
  KHJ32528.1 107 VGLQGAGKTTTCTKLARHYesrGFKsCLVCADTFRAGAFDQlKQNATKAKIPyygSLTQSDPAVVAREGVEKFKKA-KFEIIIVDTSGRHRQESALFEE 204
                 79*****************999898458899****98855532222333333445899999999999999999985.7789********9999999999 PP

                 SHHHHHHHH...SEEEEEE- CS
      AAA_17  92 lpkevleelkp.daiillea 110
                 +++ +++ + p ++i +l+ 
  KHJ32528.1 205 MKD-IQKAVLPdQTIMVLDS 223
                 986.5555556145555654 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   1.6e-07   0.00011      19     142 ..      96     222 ..      81     240 .. 0.68

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 1.6e-07
      AAA_16  19 vrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleeala........... 106
                  ++gr+++++++G +G GK++  ++l+r++e +        c  +         a+++ r + + ql+++a++a+ +++    ++  a           
  KHJ32528.1  96 PKKGRSNIIMFVGLQGAGKTTTCTKLARHYESR----GFKSCLVC---------ADTF-RAGAFDQLKQNATKAKIPYYGSLTQSDPAvvaregvekfk 180
                 578999*************************99....34444444.........7888.6688888888877777777777555555555555555455 PP

      AAA_16 107 ......avpelagaea..srllellkrll.allsrderplvlvlD 142
                       ++ + +g ++  s+l+e++k++  a l+  ++ +++vlD
  KHJ32528.1 181 kakfeiIIVDTSGRHRqeSALFEEMKDIQkAVLP--DQ-TIMVLD 222
                 5555553333333333556666666666633333..23.455555 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.1    0.0024       1.7       3      29 ..     101     127 ..      99     142 .. 0.83
   2 !    7.4   0.2    0.0039       2.7      41      90 ..     177     228 ..     145     253 .. 0.75
   3 ?    2.3   0.0      0.14        96      57      93 ..     352     386 ..     347     430 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0024
                 --EEEEE-STTSSHHHHHHHHHHSS-- CS
       SRPRB   3 kpavllvGlsdsGKTslftrLttdsvk 29 
                 ++++++vGl+ +GKT+  t+L      
  KHJ32528.1 101 SNIIMFVGLQGAGKTTTCTKLARHYES 127
                 6899****************9987554 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0039
                 TTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGG.E..EEEEEEEETTS-HH CS
       SRPRB  41 lkvksekgskltliDfPGheklrqklleklkakss.l..kglvfvvDStidpk 90 
                 +k+ ++ ++++ ++D  G ++  + l+e++k+ ++ +   + + v+DS+i ++
  KHJ32528.1 177 EKF-KKAKFEIIIVDTSGRHRQESALFEEMKDIQKaVlpDQTIMVLDSSIGQQ 228
                 344.4567788899***************9998874323589*******9765 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.14
                 TT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHH CS
       SRPRB  57 PGheklrqklleklkaksslkglvfvvDStidpkevk 93 
                 PG   l q + ++   +++lk+++++ DS    ke++
  KHJ32528.1 352 PGMGGLMQGMDDE-EGSAKLKRMIYICDSMT-VKELE 386
                 6666666666665.77899*********954.45554 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   2.7e-06    0.0018      11     102 ..      96     191 ..      89     209 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 2.7e-06
  Zeta_toxin  11 psqerPklillgGqpGAGKselaellkdele.rqgnvvrldpDdlRelhPeyeeilk....adpkkaseltqkdaselvekllqeaiengynii.veg 102
                 p++ r  +i+ +G +GAGK+++ ++l++  e r+ +   + +D++R+    ++++ +    a+   + +ltq+d  +++++ +++  +++++ii v++
  KHJ32528.1  96 PKKGRSNIIMFVGLQGAGKTTTCTKLARHYEsRGFKSCLVCADTFRAGA--FDQLKQnatkAKIPYYGSLTQSDPAVVAREGVEKFKKAKFEIIiVDT 191
                 45578889999*******************977789999*******965..5554442232466678999*********************9871455 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   7.9e-06    0.0054      23      75 ..      95     144 ..      89     255 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 7.9e-06
                 GGG-S-SEEEEEEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE---------- CS
        MeaB  23 lakaGraqvvGltGvPGaGkstlvealglelrrrGkrvavlavDPsspftGGs 75 
                  +k Gr++ + + G+ GaGk t+  +l+ ++ +rG +  ++  D   +f  G+
  KHJ32528.1  95 KPKKGRSNIIMFVGLQGAGKTTTCTKLARHYESRGFKSCLVCAD---TFRAGA 144
                 5899*********************************9999887...455555 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.1e-05    0.0076      20      60 ..     103     144 ..      98     214 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.1e-05
      AAA_30  20 vavltGpAGtGKttalkalreaweaag.grviglAptgkaAk 60 
                 + + +G  G+GKtt+ ++l++++e++g ++ +++A t +a +
  KHJ32528.1 103 IIMFVGLQGAGKTTTCTKLARHYESRGfKSCLVCADTFRAGA 144
                 67889*********************9567778898877753 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.9e-05     0.013       9      89 ..     111     255 ..     104     285 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.9e-05
                 TSSHHHHHHHHHHHHHHTT--EEEEEEEESSCCCCHHTTEB-HHHH..................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................................................... RF
        CbiA   9 GvGKTtlaanLaralarrglrVllvDaDpqannlaileglendiep..................................................... 54 
                 G+GKTt++++Lar    rg++  lv aD+ +  ++  ++l+++  +                                                     
  KHJ32528.1 111 GAGKTTTCTKLARHYESRGFKSCLVCADTFRAGAF--DQLKQNATKakipyygsltqsdpavvaregvekfkkakfeiiivdtsgrhrqesalfeemkd 207
                 89***********************9999866665..33333333367888888888887877777777777777777777777777777777777777 PP

                 ..............CCHCCCHHHHHHCHCHHHH..EEEEEEEEESS... CS
                 ..............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA  55 ..............dlkrllellealgkkkalllkiagvvlnrvdgene 89 
                               d  ++++ +ea +k ++ + ++ ++++++ dg ++
  KHJ32528.1 208 iqkavlpdqtimvlDS-SIGQQAEAQSKAFKEAANFGSIIITKTDGHAS 255
                 7777777777776644.44666666666666667777777777777655 PP

>> APS_kinase  Adenylylsulphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0     1e-05    0.0071       2      52 ..     101     151 ..     100     157 .. 0.90

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1e-05
                 -EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHTTTTTTT--SS CS
  APS_kinase   2 gvvvwltGlsgsGKstianalekkLvekgisvylLdGdnvRhgLnkdLgfs 52 
                 + ++++ Gl g+GK+t  ++l+++ +++g +  l+  d+ R g   +L ++
  KHJ32528.1 101 SNIIMFVGLQGAGKTTTCTKLARHYESRGFKSCLVCADTFRAGAFDQLKQN 151
                 6799*************************************9988877665 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.2   1.7e-05     0.012      22     117 ..      99     211 ..      55     247 .. 0.66

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.7e-05
                 .TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSH..HHHHHHHHHGGGGTGG.................GEEEESSS-B--......... CS
      ResIII  22 krdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprk..slleqtleefkkflseayke.............igkkvsgdkkka...kekdst 102
                  r + ++++   G+GKT +++kl++++ +  + + +l+ +++      +q++++ +k + ++y +             ++k+++ + +++   ++++  
  KHJ32528.1  99 GRSNIIMFVGLQGAGKTTTCTKLARHYESR-GFKSCLVCADTFraGAFDQLKQNATKAKIPYYGSltqsdpavvaregVEKFKKAKFEIIivdTSGRHR 196
                 33335669999****************986.66799999998633567899988888888887666666655554443333333333333565555555 PP

                 .-SEEEEEHHHHHHT CS
      ResIII 103 nkkilvttiqsldad 117
                 + + l+++ + ++++
  KHJ32528.1 197 QESALFEEMKDIQKA 211
                 555555555555555 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   1.6e-05     0.011       1      35 [.     104     155 ..     104     206 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.6e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.................gvnlrdvaken 35 
                 I+  G +G+GKtt +  L+++ ++                  ++l+++a++ 
  KHJ32528.1 104 IMFVGLQGAGKTTTCTKLARHYESrgfksclvcadtfragaFDQLKQNATKA 155
                 8999**************9995445555556666666665555555555555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   3.5e-05     0.024       5      32 ..     101     128 ..      97     222 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 3.5e-05
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldee 32 
                  +i++ +G  G+GKTt++ +l++ ++ +
  KHJ32528.1 101 SNIIMFVGLQGAGKTTTCTKLARHYESR 128
                 6799*******************99754 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   4.4e-05      0.03       3      26 ..     108     131 ..     106     138 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.4e-05
                      ESTTSSHHHHHHHHHHHHHHTTE. CS
  Thymidylate_kin   3 GlDGaGKttqaellkerlkeegik 26 
                      Gl GaGKtt + +l+++++++g k
       KHJ32528.1 108 GLQGAGKTTTCTKLARHYESRGFK 131
                      99******************9977 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       4.7   3.2e+03     190     235 ..      40      87 ..      12      91 .. 0.47
   2 !   14.1   0.0   4.5e-05     0.031       2      31 ..     107     136 ..     106     142 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 4.7
  ATP_bind_1 190 lekee..ekykklaeaiaelleefalvlrflplssekeesiedllsli 235
                 le +   + + +l ++i+++++  +l + +      ++  +++l++l+
  KHJ32528.1  40 LEADVnvKLVGNLRKSIKNTVNFKDLSPGVNKKRLIQKAVFDELVRLV 87 
                 222223455555666666666666666666666666666666666655 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 4.5e-05
  ATP_bind_1   2 vGpaGsGKttfvgalseilelrgrsvavvN 31 
                 vG  G+GKtt + +l+ ++e+rg ++ +v 
  KHJ32528.1 107 VGLQGAGKTTTCTKLARHYESRGFKSCLVC 136
                 899*******************99988875 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.1   7.5e-05     0.052       2      97 ..     104     233 ..     103     250 .. 0.57

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 7.5e-05
                 EEEEESTTSSHHHHHHHHHT................STEEESSSTTSSSSEEEEEEEETTEE..................................EEE CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltg................ekaivsdkpgtTrdinegrvklkgke..................................iel 50 
                 +++vG   +GK+t   +l +                               + g ++  +++                                  i++
  KHJ32528.1 104 IMFVGLQGAGKTTTCTKLARhyesrgfksclvcadtF--------------RAGAFDQLKQNatkakipyygsltqsdpavvaregvekfkkakfeIII 188
                 799****************744444444444443320..............333333111112223333333334444556666666666666666*** PP

                 EECGGCSSHHHHHHHHHHHHHHHHC.T..SEEEEEEETT...TTCSHHHHHHH CS
    MMR_HSR1  51 vDtpGliegaseekglgkaflalee.a..dlillvvdas...eeklkpldeel 97 
                 vDt G  +  ++e  l ++++++++ +  d  ++v+d+s   +      + + 
  KHJ32528.1 189 VDTSG-RH--RQESALFEEMKDIQKaVlpDQTIMVLDSSigqQ-----AEAQS 233
                 *****.44..555567777777777414599******774321.....22222 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.1   3.6e-05     0.025       2      47 ..     104     156 ..     103     224 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 3.6e-05
      AAA_28   2 ivitGgestGKTtlleaLaar....gyp...vvpEaareileeklakgedalp 47 
                 i+++G +++GKTt++ +La++    g++   v ++++r   +++l+++  +++
  KHJ32528.1 104 IMFVGLQGAGKTTTCTKLARHyesrGFKsclVCADTFRAGAFDQLKQNATKAK 156
                 7899***************8887786665534499999999999877765444 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00069      0.48      13      36 ..     100     123 ..      94     130 .. 0.83
   2 ?    0.5   0.1      0.51   3.5e+02      80     142 ..     180     242 ..     176     253 .. 0.78
   3 ?   -3.4   0.0       8.5   5.8e+03      82      98 ..     370     386 ..     368     390 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00069
                 TEEEEEEEESTTSSHHHHHHHHHH CS
         Arf  13 kelrilllGLDnaGKtTilkklkl 36 
                 ++  i+++GL +aGKtT  +kl  
  KHJ32528.1 100 RSNIIMFVGLQGAGKTTTCTKLAR 123
                 556699************999975 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.51
                 TTESEEEEEEETT-CTTHHHHHHHHHHHCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTG CS
         Arf  80 ektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpealseeelrellgl 142
                 +k +  i +vD++ r+R e+a  e  + +++  l + +++vl   +  +  ++++  +e+ + 
  KHJ32528.1 180 KKAKFEIIIVDTSGRHRQESALFEEMKDIQKAVLPDQTIMVLDSSIGQQAEAQSKAFKEAANF 242
                 555666889********9999877667778899999999999888888888877777776665 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 8.5
                 ESEEEEEEETT-CTTHH CS
         Arf  82 tdavifvvDsadreRle 98 
                  + +i++ Ds+  + le
  KHJ32528.1 370 LKRMIYICDSMTVKELE 386
                 56799999999887765 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   0.00013     0.092       1      33 [.     103     135 ..     103     150 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00013
        MobB   1 vlgivgksgsGKTtLleklipelkarglrvgti 33 
                 ++ +vg +g+GKTt  +kl ++ ++rg++ +++
  KHJ32528.1 103 IIMFVGLQGAGKTTTCTKLARHYESRGFKSCLV 135
                 689************************997766 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00015       0.1      11      64 ..     102     154 ..      97     238 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00015
      AAA_19  11 kvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrA..akelrerlaa 64 
                 ++++ ++  G GKT++ ++  ++++++g    +++l++a t rA   ++l+++ ++
  KHJ32528.1 102 NIIMFVGLQGAGKTTTCTKLARHYESRGF---KSCLVCADTFRAgaFDQLKQNATK 154
                 566777888*****************994...689999988886226777776633 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.4   0.00054      0.37       1      25 [.     104     128 ..     104     285 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00054
                 EEEESSTTSSHHHHHHHHHHHHTHE CS
         AAA   1 vllyGppGtGKTllakavakelgve 25 
                 ++++G  G GKT+++  +a++ +++
  KHJ32528.1 104 IMFVGLQGAGKTTTCTKLARHYESR 128
                 589*****************98543 PP

>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00028      0.19      10      44 ..      98     132 ..      91     183 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00028
                 ..S-EEEEEESSTTSSHHHHHHHHHHHHHHTT--E CS
       6PF2K  10 knsklvivlvGLpargKtyiskkltrylkwlgvrt 44 
                 k +  +i++vGL   gKt++ +kl r  +  g+++
  KHJ32528.1  98 KGRSNIIMFVGLQGAGKTTTCTKLARHYESRGFKS 132
                 455668899*****************988666554 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00057      0.39      35      66 ..     103     134 ..      98     165 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00057
       AAA_7  35 pvllvGptGtGKtviikdllkkldkekylslt 66 
                  +++vG +G GKt+++++l ++++++ ++s  
  KHJ32528.1 103 IIMFVGLQGAGKTTTCTKLARHYESRGFKSCL 134
                 589******************99988877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       821  (0.0457917); expected 358.6 (0.02)
Passed bias filter:                      629  (0.0350828); expected 358.6 (0.02)
Passed Vit filter:                       109  (0.00607954); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 0.69u 0.31s 00:00:01.00 Elapsed: 00:00:00.49
# Mc/sec: 2961.28
//
Query:       KHJ32529.1  [L=1122]
Description: putative endonuclease exonuclease phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.1e-11   42.1   0.0    3.1e-10   40.0   0.0    2.1  2  Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
  ------ inclusion threshold ------
       0.14   12.2   0.0        1.3    9.1   0.0    2.6  3  BBS2_Mid       Ciliary BBSome complex subunit 2, middle regio
       0.43   11.5   3.5        5.9    7.9   0.5    4.5  5  WD40           WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.35   2.1e+03      59      94 ..     595     631 ..     550     685 .. 0.73
   2 !   40.0   0.0   5.2e-14   3.1e-10       1     233 []     736    1055 ..     736    1055 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.35
                    EEECCH.ECSSSTTSSEEEEEECSTEEEEEEEEEEET CS
                    xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  59 asstsp.tgggggggnggavlsrfpltslfrrtfief 94 
                    a++ +p   + g+ +++++v+s+   t l   + + +
     KHJ32529.1 595 ANNAQPdKLFFGHADGKVSVYSKQDYTCLNIVSISIY 631
                    33333366788999999*9999999887755555555 PP

  == domain 2  score: 40.0 bits;  conditional E-value: 5.2e-14
                     EEEEESTG.CHHHHTHHHHHHHHHHHHHHCTT...SEEEEEEEBSCTCHHHHHHHHH..........TTCEEEEECCH................ CS
                     xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxx................ RF
  Exo_endo_phos    1 ltwNvngq.aspalgssrrsdrladlltayda...DvlgLQEvdddelsriplllal..........ggflgasstsp................ 64  
                     ++wN +   +++  +++ + +  ++l+ ++ +    v g+QE       +++l  +           +         +                
     KHJ32529.1  736 MSWNAGAStPFNLQQNDEDFTLFRNLILSSGCpdiLVFGFQE-------LVDLEDKKavtksffkskK---------Kyssvqehmshqyrdwr 813 
                     688888888666667777788899999999555336888***.......6666665444333444440.........14555555666666666 PP

                     ...................................................ECSSSTTSSEEEEEECSTE..EEEEEEEEEETSSSSGCEEEEE CS
                     ...................................................xxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos   65 ...................................................tgggggggnggavlsrfpl..tslfrrtfiefndlvaalrrep 105 
                                                                        +g gg +gn+ga+ +rf +  ts+                   
     KHJ32529.1  814 dflirclddhmprdelyhllhttslvglftcvfvraplidrissltsaevkRGLGGLHGNKGAIIVRFVVddTSM------------------- 888 
                     7777777777777888888888888889999999999*********************************88888................... PP

                     EEEEEEEEEECCCHHGHHHHHHHHHHHHHHHHHHHHHTTSEEEE.................................................. CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................................................. RF
  Exo_endo_phos  106 laakleqlniashrdhdlvrdlqllalllqvealnadrgapviv.................................................. 149 
                                                              ++v                                                  
     KHJ32529.1  889 -----------------------------------------CFVnchlaagqsgtrdrnaditaileasilppendrtirldsfigggdgtmil 941 
                     .........................................66666666666666666666666666666666666666666666666666666 PP

                     .......EEE-SSSTSGGGBSCGHHHHHHCTTTHHSSCESCETTTTTTTTTTTEB-B..................................... CS
                     .......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................................... RF
  Exo_endo_phos  150 .......aGDfNarpsdddsrvlrtrglalapapvglyllgggptptyvtraggsrl..................................... 199 
                             GD+N+                                          r+                                     
     KHJ32529.1  942 dheicivNGDLNY------------------------------------------RIdtmsrdtvinavkskninkllerdqliaskkknpwfk 993 
                     6666666******..........................................**999********************************** PP

                     ....................................EEEEEECHHHCCEEEEEEECCHHEECTSSCSSSB CS
                     ....................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  200 ....................................DrilaspalalfrsgvlppplalvrrealtlSDH 233 
                                                         Dril+++       g ++++l+++r+ ++ +SDH
     KHJ32529.1  994 lrafqelpitftptykydigtdtydtsekkrcpawcDRILYRG-------GCFIEQLDYRRH-EVRVSDH 1055
                     ******************************************9.......************.******* PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.51   3.1e+03      14      42 ..     279     307 ..     271     315 .. 0.84
   2 ?    9.1   0.0   0.00022       1.3      11      77 ..     599     667 ..     591     679 .. 0.83
   3 ?   -3.1   0.0       1.3   7.8e+03      85     103 ..     722     741 ..     710     743 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.51
    BBS2_Mid  14 eLvvgsddfeirvfkeeelvaeitetekv 42 
                 + + g+++ + + f+++ ++ ++te++k+
  KHJ32529.1 279 NYLKGTENETATRFQKDYVLPQVTENQKP 307
                 556799999999************99986 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00022
    BBS2_Mid  11 geneLvvgsddfeirvfkeeelvaeitetekvvslarleker..fayaleNGtvgvyekkerlWrvksk 77 
                 + ++L+ g  d ++ v+++++ +     +  +  +++l ++   + ++++ G + +y+ +e  W vk++
  KHJ32529.1 599 QPDKLFFGHADGKVSVYSKQDYTCLNIVSISIYKITALASTAgnLWAGFSTGVIYIYDVEESPWVVKKD 667
                 4578999***********99988777777777777777655444*********************9976 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 1.3
    BBS2_Mid  85 aydin.gdgtkelivgwsnG 103
                   d+  +++ + li++w+ G
  KHJ32529.1 722 KADFCeSNEITALIMSWNAG 741
                 44543256788999999998 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0         3   1.8e+04       3      16 ..      16      34 ..      15      48 .. 0.62
   2 ?   -0.9   0.0      0.61   3.6e+03       5      20 ..     439     456 ..     417     460 .. 0.59
   3 ?   -1.7   0.0       1.1   6.6e+03       7      28 ..     541     559 ..     536     565 .. 0.73
   4 ?   -1.6   0.0         1     6e+03      20      37 ..     600     615 ..     594     616 .. 0.76
   5 ?    7.9   0.5   0.00099       5.9       7      38 .]     668     706 ..     662     706 .. 0.84

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 3
                EEEEEESS....SSE.EEE CS
        WD40  3 clrtltGH....ssv.tsl 16
                ++ +l+ H    ssv t +
  KHJ32529.1 16 PVSSLRSHfeqmSSVgTNI 34
                6788888853333365555 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.61
                 EEEESS.SS..EEEEEEET CS
        WD40   5 rtltGH.ss..vtslafsp 20 
                  ++ +H  +  +ts+af p
  KHJ32529.1 439 ASF-AHtEGvkITSIAFKP 456
                 334.454335556666655 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1.1
                 EESS.SS..E.EEEEEETTSSEEEEE CS
        WD40   7 ltGH.ss..v.tslafspdgawlasG 28 
                  +GH +s  v + l       wla+G
  KHJ32529.1 541 PKGHtFSmvVgNEL-------WLATG 559
                 57996668668888.......99887 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 1
                 TTSSEEEEEETTSEEEEE CS
        WD40  20 pdgawlasGsdDgtvriW 37 
                 pd+ ++  G+ Dg+v ++
  KHJ32529.1 600 PDKLFF--GHADGKVSVY 615
                 555554..999**99987 PP

  == domain 5  score: 7.9 bits;  conditional E-value: 0.00099
                 EESS.SSEEEEEEETTSSE......EEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgaw......lasGsdDgtvriWd 38 
                 + +H +++  l  +p++ w      +++ + D+ vr+Wd
  KHJ32529.1 668 WPAHqGPIVKLISDPSSCWsldraqVVTLGQDNMVRLWD 706
                 5689778999999999999988888887688*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       572  (0.0319036); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.74u 0.28s 00:00:01.02 Elapsed: 00:00:00.45
# Mc/sec: 7534.03
//
Query:       KHJ32530.1  [L=361]
Description: hypothetical protein EV44_g5999 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.15   12.5   0.2         30    5.1   0.0    2.7  2  DUF3991   Protein of unknown function (DUF3991)


Domain annotation for each model (and alignments):
>> DUF3991  Protein of unknown function (DUF3991)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1    0.0023        42      19      50 ..      64      97 ..      54     108 .. 0.84
   2 ?    5.1   0.0    0.0017        30       2      33 ..     241     272 ..     240     317 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0023
     DUF3991 19 ekkllyedeygNav..FvykDengkvvgaekrgt 50
                +++ ly++   N+   F  +D++g+ + a  rg 
  KHJ32530.1 64 KNGKLYRSGSANIGiyFIIYDKQGELKEAVVRGF 97
                7889999888888888**********99999997 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0017
     DUF3991   2 YLtkqRkisreiiaefaekkllyedeygNavF 33 
                 YL+ +R  ++e++ +  e+ +++++ y N  +
  KHJ32530.1 241 YLCGKRVFPNEVLLRSTEEACVKMNGYYNNFY 272
                 ***********************976666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2575.80
//
Query:       KHJ32531.1  [L=165]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.089   12.7   0.0       0.14   12.1   0.0    1.3  1  NOG1_N    NOG1 N-terminal helical domain


Domain annotation for each model (and alignments):
>> NOG1_N  NOG1 N-terminal helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0     8e-06      0.14      50      87 ..      31      68 ..      18      72 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 8e-06
      NOG1_N 50 sntlsdkLeeivkkfPnldelhpFyrelldvlvdkdel 87
                 ++l+  + ++ +kfP++++lhpF   ++ +  d+++l
  KHJ32531.1 31 NTVLKSSYFAVFQKFPKINHLHPFGCRAFWLEPDQNKL 68
                45578889999*************87776666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.20s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1397.33
//
Query:       KHJ32532.1  [L=963]
Description: putative karyogamy protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.5e-135  453.4  20.5   1.5e-135  453.4  20.5    2.0  2  KAR9      Yeast cortical protein KAR9


Domain annotation for each model (and alignments):
>> KAR9  Yeast cortical protein KAR9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.8   6.5      0.38   6.8e+03     444     646 ..      90     177 ..      16     230 .. 0.48
   2 !  453.4  20.5  8.3e-140  1.5e-135       2     672 ..     240     921 ..     238     931 .. 0.81

  Alignments for each domain:
  == domain 1  score: -4.8 bits;  conditional E-value: 0.38
        KAR9 444 lelssrrkssvdlgslaerviasklkreSklPqiastleq......tkrk..skipkasskkslllstpsktatsesptpasrkesrispppknrPrwn 534
                 ++++s+ +ss +l+s + +++++k +   ++ +  +   +      tk+k  s +pka +  s++ s++s t+                          
  KHJ32532.1  90 HSANSDFSSSPKLQSQVDSSLHVKKRIPDGISTEITVF-HpislekTKQKdiSVAPKALT--SMFDSEKSFTES------------------------- 160
                 22223333333333222222222222222222222211.122222222222333333311..222221111111......................... PP

        KAR9 535 astntsDlevGhnfkpltlttpsapapsrssrssstlppvsPlerkkskspsPtaRsvsrvsarrasskptviaspnsrtslldepkyskltlrkaler 633
                                                                                                                ++++
  KHJ32532.1 161 -----------------------------------------------------------------------------------------------QINK 164
                 ...............................................................................................2333 PP

        KAR9 634 tersrqsYagtsl 646
                     + sY +  +
  KHJ32532.1 165 LTTRSVSYVASDS 177
                 3333333333222 PP

  == domain 2  score: 453.4 bits;  conditional E-value: 8.3e-140
        KAR9   2 sndLsqltkilldiplyLeasiaainnaqaavraltgaaeqiqkWike....................GregldeldkaiekieslisvylkaiEevql 80 
                   +L+qlt++ l+++++L+++i+ai +a+ a++al+ aaeqi+ Wi +                    Gregl e+dkai+++e li+vy++aiE  q+
  KHJ32532.1 240 TSQLAQLTSLQLPDAESLSSKISAITTAKIASKALVRAAEQIRSWIIQaskvitglideddvewaaagGREGLSEVDKAITRFEKLIEVYVSAIELLQS 338
                 68************************************************************************************************* PP

        KAR9  81 redia...addlknivaqmeeisdlllevkkllivvKkqvelAmeyeELwnsvlgdlgeEiedliklileleekrlss....pkkgldifeLetiveem 172
                 r+d++    ++ +ni++q++ i+ +++++k++l+ vK+ ve+Ame+eELw++vlgd+g+Ei+ l kl++e+eekr++s    +++ ++  eL ti+ee 
  KHJ32532.1 339 RKDVSdipLEEHNNIISQVDVILAEWSKIKNTLKYVKNSVEIAMEWEELWDTVLGDIGMEINILRKLVFEMEEKRHKStmrdDEDKIELAELGTIIEEK 437
                 *****999**********************************************************************99999999**********986 PP

        KAR9 173 kin...tsttfsnkrlslptf........nplDeklysdlleLeariqPLraSLdfLPmrlseFqsraeklfpsaceeledrrerLvkkykkLekdaea 260
                   +    ++  sn +++ p           p D+   + ll+L+ar+qPLraSLdf Pmrls F sr  + fpsac+ele+r  + + ++k Le+dae 
  KHJ32532.1 438 IHHkadVKPYRSNLSINSPLTqkfpeqleVPFDD---TKLLALFARMQPLRASLDFFPMRLSAFLSRVGTKFPSACKELESRFMEFEMNWKILERDAES 533
                 66666667777777887777688899999999**...9************************************************************* PP

        KAR9 261 lkkeliedrWnlvFrnlikeiqkmcdsversleklqealeqlnnptalakriesdeakkkykvcaIervlsiIqKavkdrlivngeiarllndLaskwd 359
                 l+kel+edrW+lvF+ +++++qkm+ svers  klqe +++ +    + +  + +e kk  +++aIe+vlsiI K+vk+rl+vngei+rl+ d+++kw+
  KHJ32532.1 534 LRKELGEDRWVLVFKLAGQQAQKMYGSVERSFTKLQEVVDNDTCIENSVSLCKRYEKKKEFYGPAIEQVLSIIDKGVKNRLTVNGEILRLHWDIKNKWE 632
                 *************************************999222223344556789******************************************** PP

        KAR9 360 alkesiDlnldvesssvplsvekkrvkdvlleelsksk.grqlrdSvssilteDspatlsaiktPgsspassvimepanknsstklelssrrkssvdlg 457
                 +lk+++                  +  d +l++l+    +++ rd  s++ ++D  +++  ++tPgsspass++ ++++ ns ++       ++s    
  KHJ32532.1 633 TLKDQM------------------NQLDKTLAKLQVENmNKNPRDFTSKLNNTDHITSGYLHGTPGSSPASSIVITNQK-NSLDP----ATPGKSL--T 706
                 ******..................8888888877655549************************************987.44444....3455555..5 PP

        KAR9 458 slaerviasklkreSklPqiastleqtkrkskipkasskkslllstpsktatsesptpasrkesrispppknrPrwnastntsDlevGhnfkpltlttp 556
                 + +++  +++ kr S lP + + + +++ +s+  ++ s+  + +s p++  ++++    +  +s + ++++ +Prwn+st+ ++ ++Gh++kp +  tp
  KHJ32532.1 707 KNTNKLSQVSGKRISSLPVSIARY-RRSLSSSFSTIGSSFGSHSS-PKQGIMTPTA--CNISKSSQLSSSDGKPRWNNSTRVQEGSIGHVYKPTSFKTP 801
                 677999999***************.33334777777664444444.5555555444..44444444555589*************************** PP

        KAR9 557 sapapsrssrssstlppvsPlerkkskspsPtaRsvsrvsarrasskptviaspnsrtslldepkyskltlrk.........alertersrqsYagtsl 646
                 s p++++++    +++ + + e k+ ++p P      r+++ +   +p++i s +s++ l   ++ s+ ++           + +++ rs  s     +
  KHJ32532.1 802 S-PQSNSKQFV--KNSNRLSAESKTLSQP-P------RAQKDEFLTTPDIILSRTSNSRLSFRDRLSERVFTAgnssqgfakSSPNQLRSQISLSTLHV 890
                 *.777777766..3443444555555555.4......45555555555555555552222223333333333333333333355555555555443322 PP

        KAR9 647 s...rsssveseegkq..tkssrPgtslgss 672
                     r +   +e +++  tk+sr  tslg++
  KHJ32532.1 891 GskcRAQPSRNEMIDNtpTKASRSVTSLGKN 921
                 2000222222222222467777888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (963 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       990  (0.0552178); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.26s 00:00:00.98 Elapsed: 00:00:00.41
# Mc/sec: 7037.62
//
Query:       KHJ32533.1  [L=1029]
Description: putative sodium calcium exchanger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-51  172.4  46.3    4.7e-29  101.3  21.0    3.2  3  Na_Ca_ex  Sodium/calcium exchanger protein
  ------ inclusion threshold ------
       0.73    9.7   5.6       0.23   11.3   0.4    2.7  2  Vpu       Vpu protein


Domain annotation for each model (and alignments):
>> Na_Ca_ex  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.16   1.4e+03      96     131 ..      10      40 ..       1      46 [. 0.40
   2 !  101.3  21.0   5.3e-33   4.7e-29       2     149 ..     112     251 ..     111     253 .. 0.96
   3 !   77.3  15.1   1.3e-25   1.2e-21       3     149 ..     844    1005 ..     842    1007 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.16
                 SCECCHHH.HHHHHHHHHHHHHHHHTCHHHHHHTEEH CS
    Na_Ca_ex  96 seslkldl.gllllvallllllvlllllplfvpgrlt 131
                 +e   ++  + + +++++l+ll++l l      g+ +
  KHJ32533.1  10 KEKSRNNYlQSFTFTVICLTLLAILSL------GKSQ 40 
                 333233332333333333333333322......5555 PP

  == domain 2  score: 101.3 bits;  conditional E-value: 5.3e-33
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCECC CS
    Na_Ca_ex   2 lfvlfilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigslkvdseslk 100
                 +++l +l++ ++++++df++ +++ +a++lg+s+s++G+t+lA+gn +p+++s+++a+ +++++la+g+++G+++f++++v G++al++ + v +++l+
  KHJ32533.1 112 SLWLALLFTTIGIAASDFFCINLNTVASILGLSESIVGTTFLAFGNGSPDFFSTFAAMNSNSGSLAVGELIGAAAFITTMVAGSMALVSEFRVGKKNLI 210
                 689999**********************************************************************************99********* PP

                 HHHHHHHHHHHHHHHHHHHTCHHHHHHTEEHHHHHHHHHHHHHHHHHHH CS
    Na_Ca_ex 101 ldlgllllvallllllvlllllplfvpgrltvleglvllllYalylvls 149
                 +dl ++++va++l++++l+        g l ++e+lv+++ Y+ly+v++
  KHJ32533.1 211 RDL-GFFIVAICLIIIFLA-D------GLLHLWECLVMVGYYILYVVVV 251
                 ***.889999999887777.6......********************86 PP

  == domain 3  score: 77.3 bits;  conditional E-value: 1.3e-25
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHH......BT CS
    Na_Ca_ex    3 fvlfilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigs......lk 93  
                  f++fi+s+++i ++a  +v  + +i+ +l++s+++lGlt++Alg+sl++l+++i  a+ g + +a+++++G+ +fn+ll+iGl++++ +        
  KHJ32533.1  844 FLGFIVSIAWIFTIAGEVVGVLKAIGIILDLSDAILGLTVFALGGSLGDLVADINLARLGFPVMALSACFGGPMFNILLGIGLSGVYVTvneankN- 939 
                  89************************99***********************************************************996654440. PP

                  TSSCE............CCHHHHHHHHHHHHHHHHHHHTCHHHHH...HTEEHHHHHHHHHHHHHHHHHHH CS
    Na_Ca_ex   94 vdses............lkldlgllllvallllllvlllllplfv...pgrltvleglvllllYalylvls 149 
                      +            + ++++ +l+++++ ll++l+ +l+  v   ++++ +  g  l+ll+ + +v++
  KHJ32533.1  940 ----QiknpahhilyrpYQIEVSSTLIISVMTLLTALVGILIS-VplnKWVMGRRIGWSLILLWSISTVVN 1005
                  ....145566666776655555555555665555555544333.4577*******************9987 PP

>> Vpu  Vpu protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.4   2.5e-05      0.23       2      52 ..     233     282 ..     232     297 .. 0.80
   2 ?   -1.1   0.6      0.19   1.7e+03       5      28 ..     779     802 ..     776     812 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.5e-05
         Vpu   2 lsleliglialivaliiaivvWtivyreykkikkqkeierlikrireraed 52 
                 + +e + ++   ++ ++++++W   y e +++++++++   ++ +  ++ed
  KHJ32533.1 233 HLWECLVMVGYYILYVVVVCIWHW-YFEVRRKRRNRKLAANCQFLNRTNED 282
                 5688899999************86.78899999999988887777777776 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.19
         Vpu   5 eliglialivaliiaivvWtivyr 28 
                 +l+++ ++   l++ i++Wt+ ++
  KHJ32533.1 779 WLVSIQIFTSPLFLIIIFWTNSAK 802
                 567888888889999****99776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1029 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1076  (0.0600145); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.25s 00:00:01.00 Elapsed: 00:00:00.40
# Mc/sec: 7689.89
//
Query:       KHJ32534.1  [L=834]
Description: putative condensin complex component cnd2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.8e-264  878.4   9.8   7.3e-264  878.1   9.8    1.0  1  Cnd2      Condensin complex subunit 2
     0.0043   17.2   0.0      0.013   15.7   0.0    1.8  1  CNDH2_N   Condensin II complex subunit CAP-H2 or CNDH2, N-ter
  ------ inclusion threshold ------
       0.35   11.4   2.3        1.1    9.8   1.8    2.0  2  Pep1_7    Elicitor peptide 1-7


Domain annotation for each model (and alignments):
>> Cnd2  Condensin complex subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  878.1   9.8  1.2e-267  7.3e-264       4     765 ..      19     823 ..      17     824 .. 0.85

  Alignments for each domain:
  == domain 1  score: 878.1 bits;  conditional E-value: 1.2e-267
        Cnd2   4 stplkrspvkiplNDDeaEkakrrksrqalheaqinqikaaatparrrksaavee.aassssprtP...................k.tpmkrvpilanf 81 
                  +p k sp+kiplNDD++Ekakr++srqalh +q nqikaaa+p rr ++  +++ +++ s+p+tP                   + tpmkrvp+lanf
  KHJ32534.1  19 GSPSK-SPIKIPLNDDAQEKAKRLQSRQALHGIQLNQIKAAASPVRRLANFDRADsSSPPSNPKTPrrigkenefdtgllklggnAvTPMKRVPLLANF 116
                 68999.**************************************9999987777756677888888**************9998637************ PP

        Cnd2  82 eewmklatdNKInakNsWnlaLIDyfhdmsLLkegdsvNFqkAsctLDgcvKIYtsRVDSvatetgkllsgLadstekkkkdneeeedeeegdeeeeee 180
                 eewmk+atdNKIna+NsWn+aLIDyfhd+sLLkegdsvNFqkAsctLDgcvKIYtsRVDSvatetgkllsgLads+++k k++    +++ g+e+eee 
  KHJ32534.1 117 EEWMKMATDNKINATNSWNFALIDYFHDLSLLKEGDSVNFQKASCTLDGCVKIYTSRVDSVATETGKLLSGLADSSNSKVKKS----GNDSGEESEEEV 211
                 ****************************************************************************8777643....445788888888 PP

        Cnd2 181 egedgeekkkkkkKkqrsseatlaksfeslqlkklelefavDPLFkkasAdfDeggakglLLNhLsidsegrivfDssddaedaa.............. 265
                 e+edg  +k+ kk+ qrs  +tla sfe+l+lkk+elef+vDPLFkkasAdfDeggakglLLNhLsid +grivfDssdda d                
  KHJ32534.1 212 EEEDGVIRKRIKKRSQRSCDTTLASSFETLRLKKFELEFSVDPLFKKASADFDEGGAKGLLLNHLSIDCQGRIVFDSSDDAIDNFnenltsgqedanie 310
                 899***99999********************************************************************99887799************ PP

        Cnd2 266 ......sqteeeeeeeeeeedveidlasLaarffpdlerleeldicpslknfdlgdapsgsldipflkapedwrqdkddleaede.lgdasgilldddn 357
                         ++  ++e +e+ ++++d+asL+arffp+l++l+++dicpslknfdlgd+ ++ ++ipflkape+wr+++d++ +++e  +d     +dd +
  KHJ32534.1 311 ginrtgPIETVVTTEPNEHGNADVDIASLQARFFPNLDALDDQDICPSLKNFDLGDTSNNVTKIPFLKAPEEWRSERDRSSSNKEiCNDPVFSTIDDHQ 409
                 ****8733445556666778999*********************************98899******************99999878887777777755 PP

        Cnd2 358 aagfdddddgllnafdlggdagfgeggeawareaa......lepq..dedeg.....evednd...ey.avslsrkqkkekv.eelrdilsyfdqalqk 438
                     d+d+d  ++      d+gfgegge war+a       ++++  d   +     + +d d   ++  ++    ++++k+  e  +ilsyfd+ lqk
  KHJ32534.1 410 TSINDEDNDD-DGLMGNFLDTGFGEGGEVWARDACvvvsnrVHDMglD--YDsmvggDCKDTDgrcSFdFIAPL--DPSTKLkIEHSNILSYFDEGLQK 503
                 4433323222.222222238**************96544444444442..322334333333355533334443..34444444446************ PP

        Cnd2 439 nWagPehWrirrikdvnkseeaakkkrkekepfeidFeapldesvaealftqassnsaislpkkqlkkksrnlLPddkhfnskqLlklflkPkarlsrr 537
                 nWagPehWrir+ikd+nk +    k +keke fei+F++pl+++++e +ftq+ss + i+lpk ++k+k++nlLPddkhf+skqLl lflkP  rl++ 
  KHJ32534.1 504 NWAGPEHWRIRKIKDANKLA-PIAKPKKEKELFEINFSSPLNTKLSELIFTQSSSSNVICLPKREYKNKNKNLLPDDKHFSSKQLLGLFLKPTKRLESY 601
                 ***************99988.556999***********************************************************************9 PP

        Cnd2 538 ........kee.veegemdeafwakqkaeeeaakedeeap.qGdyDanffadddglpfpqdlgggddddDddlefadarehfspaagaagatgltaela 626
                         +++ ++ ++++eafwa+ ++++++       + +G+yDanff+ d+++p+        d dDd+ e+ d++e+ s+    +g++g++a+ +
  KHJ32534.1 602 qiaynsmnSPQiQSGDNINEAFWAQPNENNNTI----GVEtHGNYDANFFQ-DNEMPI------VEDLDDDNPEYMDTQENPST--ILDGTKGVDASGN 687
                 9***99876665588899*******88876665....44449*********.666655......3455666777********99..3344455555554 PP

        Cnd2 627 gleatagaeaklnetlafgstlvtqprrvrkeyvqYArvAKkvDvrrLKeelWklieeellesaaeeeesseeaakske..keekgalkFtevmnnLkk 723
                      +++    ++  afg++l+tq rr r+ yvq+ArvAKkvDvr+LKeelWk+i+++++ + ++ ++  +  + ++e   e+  +lkFt++m+nL+k
  KHJ32534.1 688 -----VNEGVIHDDGRAFGNHLITQNRRQRPDYVQFARVAKKVDVRKLKEELWKGINYNEKYTVKNFQTPGRLPTPDEEvgIEAGASLKFTSIMKNLQK 781
                 .....33444567899*****************************************999987655555555444444467889999************ PP

        Cnd2 724 vypkqmmediStslaFiclLHLANEkgLklekqedledlkIr 765
                 vypkq m++iSts++FiclLHLANEkgL ++k+++l++l+I 
  KHJ32534.1 782 VYPKQDMSEISTSYCFICLLHLANEKGLIIHKNKELTELEII 823
                 ****************************************96 PP

>> CNDH2_N  Condensin II complex subunit CAP-H2 or CNDH2, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   2.2e-06     0.013      37     101 ..     150     214 ..     127     219 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 2.2e-06
     CNDH2_N  37 gkttlnFaeAaLliqgsavvYsrKveyLyslvyqtlellskkkkkkqkesesekgededaeaaea 101
                 +  ++nF +A+  + g +++Y+ +v+ + + + + l  l++ +++k k+s +++ge++++e  e+
  KHJ32534.1 150 EGDSVNFQKASCTLDGCVKIYTSRVDSVATETGKLLSGLADSSNSKVKKSGNDSGEESEEEVEEE 214
                 34679***********************************9999888888888888777444433 PP

>> Pep1_7  Elicitor peptide 1-7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.4   8.6e+03      35      64 ..      17      46 ..      15      60 .. 0.76
   2 ?    9.8   1.8   0.00018       1.1      34      74 ..     187     228 ..     181     232 .. 0.65

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.4
      Pep1_7 35 Lesssskspsssseeeeeetetvevtsrgl 64
                L  s+sksp+++  +++  ++ +  +sr  
  KHJ32534.1 17 LTGSPSKSPIKIPLNDDAQEKAKRLQSRQA 46
                667899999999998877777777777765 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00018
      Pep1_7  34 GLesssskspsssseeeeeetetvevtsrglvak..vlkrrpk 74 
                 GL  +ss+s++++s ++++e+ ++ev+++  v++  ++kr ++
  KHJ32534.1 187 GL-ADSSNSKVKKSGNDSGEESEEEVEEEDGVIRkrIKKRSQR 228
                 55.5677778888888888877777777666666255555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (834 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       639  (0.0356406); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.39
# Mc/sec: 6418.94
//
Query:       KHJ32535.1  [L=1118]
Description: putative galactose oxidase kelch beta-propeller protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0036   17.5   3.9        2.1    8.7   0.1    4.1  3  Kelch_3   Galactose oxidase, central domain
     0.0079   16.2   0.7       0.24   11.4   0.0    3.4  3  Kelch_5   Kelch motif
  ------ inclusion threshold ------
       0.54   10.3   2.6        8.2    6.6   0.1    4.0  5  Kelch_2   Kelch motif


Domain annotation for each model (and alignments):
>> Kelch_3  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.1   0.00036       2.1       6      45 ..      99     142 ..      95     146 .. 0.74
   2 ?   -0.5   0.0      0.28   1.7e+03       4      29 ..     169     204 ..     167     227 .. 0.62
   3 !    6.7   0.2    0.0015       8.8       1      46 [.     313     368 ..     313     371 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00036
     Kelch_3   6 ifGGlgddgqdrlndvyvydl......dtntWaeiaslppaRagha 45 
                 i++G++   +++++++++y++       +++W +++  p a++  +
  KHJ32535.1  99 IYTGKC--DTPNTSALWRYQFsdpdikTSGNWIQVSIRPAADMTSS 142
                 899***..58*********884445444448888877788887655 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.28
     Kelch_3   4 lyifGGlgd..........dgqdrlndvyvydldtn 29 
                 +y fGGl++          +   ++n ++++ + ++
  KHJ32535.1 169 IYTFGGLCPktnativtwqSAAHYSNHMLRLTPTSD 204
                 788999998765555555333445577777766555 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0015
     Kelch_3   1 gdrlyifGGlgd.dgqdrlndvyvydldtn.....tWa..eiaslpp..aRaghaa 46 
                 g +l ifGG+ +  +q ++ ++  ++l+t+     +W+    a  p+  + +gh a
  KHJ32535.1 313 GSKLIIFGGWVGdVSQAAEPQLIILSLGTGyggsgNWEwsVPAAQPSggGIYGHGA 368
                 5789*******98889999********88888888666524455555445555544 PP

>> Kelch_5  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.16   9.6e+02      15      40 ..     167     202 ..     155     204 .. 0.56
   2 !   11.4   0.0     4e-05      0.24       4      27 ..     301     325 ..     298     331 .. 0.80
   3 ?   -0.8   0.2      0.27   1.6e+03       4      24 ..     362     382 ..     360     388 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.16
     Kelch_5  15 ekiYvyGGkv........g..rdgsvsddvyvLdlp 40 
                 ++iY +GG          +  +  ++s+++++L+++
  KHJ32535.1 167 TNIYTFGGLCpktnativTwqSAAHYSNHMLRLTPT 202
                 678888886544444443233456666666666665 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 4e-05
     Kelch_5   4 pRaghcavtv..sekiYvyGGkvgrd 27 
                 +R+gh av    ++k++++GG+vg d
  KHJ32535.1 301 SRSGHTAVLNedGSKLIIFGGWVG-D 325
                 79******75326**********7.3 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.27
     Kelch_5   4 pRaghcavtvsekiYvyGGkv 24 
                 +++gh a ++++++ +++G  
  KHJ32535.1 362 GIYGHGATMLPGNVMMISGGF 382
                 589*******99988877754 PP

>> Kelch_2  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.3   7.9e+03      13      20 ..     168     175 ..     155     198 .. 0.69
   2 ?   -2.2   0.0      0.82   4.9e+03      15      45 ..     247     276 ..     241     278 .. 0.72
   3 ?    6.6   0.1    0.0014       8.2       2      21 ..     302     328 ..     301     352 .. 0.75
   4 ?   -1.5   0.1      0.47   2.8e+03       6      25 ..     368     389 ..     364     397 .. 0.69
   5 ?   -0.3   0.0       0.2   1.2e+03       6      36 ..     442     471 ..     438     474 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.3
     Kelch_2  13 kiyvvGGa 20 
                  iy +GG 
  KHJ32535.1 168 NIYTFGGL 175
                 69999998 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.82
     Kelch_2  15 yvvGGahtdnpnlsssdvhvldlekhvWeev 45 
                 +++GG+ t++   s   v ++ l ++ W+ v
  KHJ32535.1 247 VMIGGH-TQDAFISMGQVAIWSLPEEAWSFV 276
                 677777.666666666788888888888876 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0014
     Kelch_2   2 rgghsssvp..ggkiyvvGGa.....h 21 
                 r+gh+++    g+k++++GG+     +
  KHJ32535.1 302 RSGHTAVLNedGSKLIIFGGWvgdvsQ 328
                 89999999899**********555542 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 0.47
     Kelch_2   6 sssvpggkiyvvGGa..htdnp 25 
                 ++  pg+ + + GG+   t ++
  KHJ32535.1 368 ATMLPGNVMMISGGFeiSTNMM 389
                 445889********96555555 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 0.2
     Kelch_2   6 sssvpggkiyvvGGahtdnpnlsssdvhvld 36 
                  ++v+g+ ++ vG + ++ +n+  +d+++ d
  KHJ32535.1 442 LAVVIGSILLCVGLR-RHQKNRNLRDNNISD 471
                 58999**********.999999999998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       666  (0.0371465); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.23s 00:00:00.90 Elapsed: 00:00:00.37
# Mc/sec: 9140.17
//
Query:       KHJ32536.1  [L=474]
Description: putative carboxypeptidase s1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.9e-99  332.6   9.8    6.6e-99  332.2   9.8    1.1  1  Peptidase_S10  Serine carboxypeptidase


Domain annotation for each model (and alignments):
>> Peptidase_S10  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  332.2   9.8  3.7e-103   6.6e-99       5     417 ..      61     467 ..      57     468 .. 0.89

  Alignments for each domain:
  == domain 1  score: 332.2 bits;  conditional E-value: 3.7e-103
                    ST-SSEEEEEEEECSTTTTEEEEEEEEE-SSGTTTS-EEEEE--TTTB-THHHHHHTTSSEEEETTTTSEEEE-TT-GGGCSEEEEE--STTSTT- CS
  Peptidase_S10   5 etvnfkqysGYldveeeedkslFYwfveseknpeedplvlWLnGGPGCsSldGlleElGPfrvnkdstkkleenpysWnkvanvlfldqPvGvGFS 100
                    +t+ ++qysGYl+v   +++++++wf+e+++ p+++pl +W+nGGPGCsS+ Gl++E+GP++++++ + ++ +npysWn+ +n+l++dqP+GvGFS
     KHJ32536.1  61 TTPGVNQYSGYLSVG--TNENMWFWFFEARNRPTTAPLSVWFNGGPGCSSMVGLFQENGPCHFENG-SDEPSLNPYSWNEYSNMLYIDQPIGVGFS 153
                    56889**********..88*********************************************55.6**************************** PP

                    EETTSSGS--SHHHHHHHHHHHHHHHHHHSTCGTTSEEEEEEETTHHHHHHHHHHHHHTHCCH--S.....STSEEEEEEEESE-SBHHHHHCCHH CS
  Peptidase_S10 101 ysntksdvktddeevaedlyefLkkffekfpeyksrdfyitGESYaGhyvPalakeilkknkkekk.....kkinLkGlligNglideaeqvnsyv 191
                    y +++ +   ++++ a  ++++++ f+++fp+y++r+f + +ESY+Ghy P +++ + ++n + k+     + i+ k l+i Ng+ d a+q+++++
     KHJ32536.1 154 YGENNVN---STTSSAVLVWKLVQAFYAQFPQYENRTFGVFTESYGGHYGPEFVSYFQSQNMAIKDgrikaQVIDVKVLAINNGWYDSAIQTKALI 246
                    ****999...99*************************************************999889999999*********************** PP

                    HHHHHTT...SSHHHHHHHHHHHHEETHHHHHHHHHHHHHHHHHHHHH............HHHHCHCEETTETTSEETTSSEEHHHCTTCCCCTTT CS
  Peptidase_S10 192 efayehg...liseeeyeslkkacekkeeleqesekcanllekaskva............vekenkglnvynileeccklkaelkksstdaqgged 272
                    ++ay+ +   li+++ey+++ +    ++++ ++ ++c +++ +  ++a               ++k++ +y+                    +++d
     KHJ32536.1 247 DYAYKNNyrpLINSTEYNEYIDVY--NKHCLPALQNCTSKVGQDASCAfafdtcsnyvegPILNTKDFGIYD-----------------VRAPRDD 323
                    *99865422289999999988777..5679999999999998888776553333333333222223333333.................4556689 PP

                    TTCHHHHHHHHTSHHHHHHTT--TTSSS--SB-HHH...HHHCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-STT-HHHHHHHHHHTECTTECCS CS
  Peptidase_S10 273 pydesyvekylnkkeVrkalhvnasvkkweecndsv...feqleddisksveeileellesglrvliynGdvDlicnvlgteawikklelsgkkef 365
                    p   + + kyln+++V +a++++    +++ec +++   f++ + d ++s+++ l+ +++sg++ li++Gd+D icn+ g  ++ +++++s +++f
     KHJ32536.1 324 PNPITTYLKYLNSSQVVNAIGAK---VSYTECANDLfekFSE-TGDNARSYISTLSSVVQSGVKTLIWAGDADWICNWYGGLDVAQNINYSESTNF 415
                    999999***************74...89********874444.456669*********************************************** PP

                    CCCEEEETTTCESEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHHHHHH CS
  Peptidase_S10 366 rpwevspkkengqvaGyvkeyenltfltvkgaGHmvPedkpeealqllerfi 417
                    +++++ + + ng+v+G++k+ +nl++l+v+g+GH+vP+++pe alq++++++
     KHJ32536.1 416 KTQKSANYTINGKVGGEFKTAGNLSWLRVYGGGHEVPYYQPELALQVFRQMF 467
                    ************************************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.36
# Mc/sec: 3900.59
//
Query:       KHJ32537.1  [L=412]
Description: putative phosphoserine phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-15   58.4   0.0    1.9e-15   57.7   0.0    1.3  1  HAD              haloacid dehalogenase-like hydrolase
      2e-14   54.4   0.1    3.4e-14   53.7   0.1    1.4  1  Hydrolase        haloacid dehalogenase-like hydrolase
    4.7e-08   33.1   0.5    3.1e-07   30.4   0.1    2.2  2  Hydrolase_3      haloacid dehalogenase-like hydrolase
     0.0096   15.3   0.0          1    8.7   0.0    2.2  2  Put_Phosphatase  Putative Phosphatase
  ------ inclusion threshold ------
      0.046   13.8   0.6        1.8    8.6   0.6    2.9  1  HAD_2            Haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> HAD  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.7   0.0   5.4e-19   1.9e-15       1     187 [.     198     365 ..     198     366 .. 0.86

  Alignments for each domain:
  == domain 1  score: 57.7 bits;  conditional E-value: 5.4e-19
         HAD   1 alfDfDgTLldgdslelllrfllrrgaprlwralreklllalfrellrldraglaelleallaglseelaaelerfvaevirpklldpgalellaahra 99 
                 + fD+D TL++++ ++l+++  ++++a+    +l ek+++        ld ++  +l  +ll+g +e++   l+ ++       + + g++ l+ a ++
  KHJ32537.1 198 VCFDMDSTLIQEELIDLIAE-SIGVKAE--VSTLTEKAMNGE------LDFLESLKLRVKLLKGIDEDIFTKLQGLI-------TPTKGVKNLIVALKK 280
                 68**********99999999.5555332..334444444444......3334556999*********9999999999.......5556*********** PP

         HAD 100 aGdrvvvvSgglrplvepllaelgadevlatelevdd.rltgelglegkpvrgegkvaalrewlaaegegidleevvayGDspsDlpll 187
                  G+r++v Sgg+ p v  l+ elg+d+v a+ l   d r+tge  leg +v+ e k + l e   a++e i +  +va+GD+ +Dl +l
  KHJ32537.1 281 IGVRTAVFSGGFLPTVSWLAGELGIDYVHANILSISDgRFTGE--LEGEVVNAERKRTLLYE--IAKNESININQTVAVGDGANDLLML 365
                 *******************************9999999*****..*****************..88888999999***********997 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.1   9.3e-18   3.4e-14       2     210 .]     196     369 ..     195     369 .. 0.83

  Alignments for each domain:
  == domain 1  score: 53.7 bits;  conditional E-value: 9.3e-18
                 SEEEEESBTTTBCHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHETTTEHHHHTHHHHHHHHHCHHHHHHHHHHHHHHCHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase   2 ktvvfDkdGTLttgepsvedvivsaalalaaaletgsehpigkalvaaakarsgaltgfatfigrgayaigkpewltaldippdlgaaigsaqsqgrtv 100
                 ++v+fD+d TL++ e     +i+ +                     a+  +++ +++  ++     +++ g+ ++l++l               + r  
  KHJ32537.1 196 RLVCFDMDSTLIQEE-----LIDLI---------------------AESIGVKAEVSTLTE-----KAMNGELDFLESL---------------KLRVK 248
                 689*********888.....99999.....................999999999******.....*************...............66666 PP

                 HHHTTHHHHHHHHH..HTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTGGGESEEEEHHCES......STTT.SHHHHHHHHHHHT... CS
                 xxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxx.xxxxxxxxxxxxx... RF
   Hydrolase 101 allqaralavftia..dplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlGddyfdaviasdiet......vakp.spegkvaaireLq... 187
                  l+   +++++  +    +++ ++++ ++ +Lk+ g+++++ +g++  t+  +a +lG dy++a+i s+ ++       +++ + e k+ ++ e+    
  KHJ32537.1 249 LLK--GIDEDIFTKlqGLITPTKGVKNLIVALKKIGVRTAVFSGGFLPTVSWLAGELGIDYVHANILSISDGrftgelEGEVvNAERKRTLLYEIAkne 345
                 666..22222222223555599************************************99997777777777786666333358888888888886667 PP

                 .STGGGEEEEESSHHHHHHHHHTT CS
                 .xxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 188 .gkpeevamVGDgvnDaaalaaAg 210
                  ++++++++VGDg+nD+ +l aAg
  KHJ32537.1 346 sININQTVAVGDGANDLLMLGAAG 369
                 799*******************98 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.15   5.4e+02       1      12 [.     198     209 ..     198     218 .. 0.89
   2 !   30.4   0.1   8.5e-11   3.1e-07     188     229 ..     334     375 ..     326     387 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.15
                  EEEEIIIIIS-T CS
  Hydrolase_3   1 ialDlDGTLlns 12 
                  +++D+D TL+++
   KHJ32537.1 198 VCFDMDSTLIQE 209
                  689******986 PP

  == domain 2  score: 30.4 bits;  conditional E-value: 8.5e-11
                  HHHHHHHHHHHCT--GGGEEEEESSGGGHHHHHHSSEEEEET CS
  Hydrolase_3 188 KgtalkklakelnisleeviafGDgeNDieMLeaaglgvAmg 229
                  K t l ++ak+ +i+ ++++a+GDg ND+ ML aaglgvA +
   KHJ32537.1 334 KRTLLYEIAKNESININQTVAVGDGANDLLMLGAAGLGVAWN 375
                  889999*********************************964 PP

>> Put_Phosphatase  Putative Phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0   0.00029         1       2      40 ..     197     235 ..     196     286 .. 0.82
   2 !    4.5   0.0    0.0055        20     153     182 ..     336     362 ..     330     391 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00029
  Put_Phosphatase   2 lvvfDFDktiidedsdnwvvdelpatelfeelretlrkg 40 
                      lv fD D t+i+e+  + + + ++ +++ + l e+  +g
       KHJ32537.1 197 LVCFDMDSTLIQEELIDLIAESIGVKAEVSTLTEKAMNG 235
                      89**************************99999887655 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0055
  Put_Phosphatase 153 kvleelvaeqaregveyerliYvGDganDl 182
                      ++l e+ ++   e+++ ++ + vGDganDl
       KHJ32537.1 336 TLLYEIAKN---ESININQTVAVGDGANDL 362
                      555555555...78999************8 PP

>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.6    0.0005       1.8       3     176 ..     200     373 ..     198     375 .. 0.61

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0005
       HAD_2   3 FDlDgTlldteeliiqafnelleeyglselseeelrkliglslrellrklgeseeeeekieellrkyneekkkkevkpydgvkelLeeLkeagyklgiv 101
                 FD+D Tl+ +e li  +++++    g++       +k ++ +l + l+ l+ + +   +++ + +++ ++++   ++p +gvk+l+  Lk+ g++ ++ 
  KHJ32537.1 200 FDMDSTLIQEE-LIDLIAESI----GVKAEVSTLTEKAMNGEL-DFLESLKLRVK---LLKGIDEDIFTKLQG-LITPTKGVKNLIVALKKIGVRTAVF 288
                 88888888654.332233333....343222233334444444.55555555433...667776667777776.9999999999999999999999999 PP

       HAD_2 102 TsksreaveekleqlgiesyFdvivtsedvekk............KPdpeviekaleklklkkeeviyvGDsptDieaakkagikvi 176
                 + +   +v     +lgi+ +   i++ +d                K   +++ ++ ++  ++ ++++ vGD  +D+    +ag+ v+
  KHJ32537.1 289 SGGFLPTVSWLAGELGIDYVHANILSISDGRFTgelegevvnaerK--RTLLYEIAKNESININQTVAVGDGANDLLMLGAAGLGVA 373
                 9998888888888888877777776655422111111112222223..666677777778888888888888888887777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2862.67
//
Query:       KHJ32538.1  [L=410]
Description: putative transcription factor c2h2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.7e-17   61.3   0.1    1.4e-16   60.1   0.1    1.7  1  zf-Nse        Zinc-finger of the MIZ type in Nse subunit
  ------ inclusion threshold ------
      0.012   15.6   0.1      0.034   14.2   0.1    1.9  1  zf-RING_UBOX  RING-type zinc-finger
        2.9    7.8  11.2       0.11   12.4   2.5    2.5  3  DUF327        Protein of unknown function (DUF327)


Domain annotation for each model (and alignments):
>> zf-Nse  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.1   0.1   2.3e-20   1.4e-16       1      57 []     277     349 ..     277     349 .. 0.97

  Alignments for each domain:
  == domain 1  score: 60.1 bits;  conditional E-value: 2.3e-20
                 SXXXXXSSBXXSB-TTTSSB-SSEEEESSS--EEEHHHHHHHC................TTTS-EE-SCCC-S CS
      zf-Nse   1 delaieeerislkCPltlqpfeePvtskkCpHvFEreaIleli................krkktvkCPvagCs 57 
                 de+ +++++++lkC  tlq+feeP  ++kC+H++E++aIl+++                  +k++ CP  gCs
  KHJ32538.1 277 DEIIMTSATTNLKCSFTLQYFEEPFSNRKCKHTYEKSAILDYLntegvvysqpgqrgtrLGNKKITCPTPGCS 349
                 9*******************************************************99878999********7 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   5.6e-06     0.034       1      39 []     290     344 ..     290     344 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.6e-06
  zf-RING_UBOX   1 CpIClelftdPlv.l.pCGHtFCreCl............w...elskslegafkCP 39 
                   C+  l+ f++P +   +C Ht+ ++ +            +     ++ ++++++CP
    KHJ32538.1 290 CSFTLQYFEEP-FsNrKCKHTYEKSAIldylntegvvysQpgqRGTRLGNKKITCP 344
                   8899999****.55448**********99888766665526678899999999998 PP

>> DUF327  Protein of unknown function (DUF327)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   2.5   1.9e-05      0.11      53     111 ..      52     113 ..      49     135 .. 0.76
   2 ?   -1.3   0.7      0.32   1.9e+03      42      77 ..     127     164 ..     114     192 .. 0.46
   3 ?   -0.6   1.4      0.19   1.1e+03      21      70 ..     174     233 ..     150     247 .. 0.44

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.9e-05
                 HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHT..-----H.HHHHHHHHH...HHHHHH CS
      DUF327  53 gerLaesrtiedlkkYkklvkeflkevvknslklkkersldrkg.rsrvykivk...eiDekl 111
                   +L+e     d+ kYkk++k+  + ++k+ ++ ++ r ++rk+  + + + +k   +iDekl
  KHJ32538.1  52 KRKLEELNLHHDVMKYKKAIKDATNLITKSTYECND-RLWQRKQkLKAIEERIKtsgNIDEKL 113
                 56888888899***********************96.56776663333444454222577777 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.32
                 HHHHHHHHHHHHH.HHHHH--H.HHHHHHHHHHHHHHH CS
      DUF327  42 lkelleeidkqge.rLaesrti.edlkkYkklvkeflk 77 
                 l++ +eei+ ++e  L +  ++ ++l+  ++l  e  +
  KHJ32538.1 127 LEKKVEEITFKAEkALRDLIDYgDELSIQQNLMHEVAQ 164
                 44444444422220233333321233333333334444 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.19
                 XXXX-HHHHHHHHHHHHHHHH..............HHHHHHHHHHHHHHHHHH--HHHHHHHHH CS
      DUF327  21 kkkksFsetlekeeeeeseee..............lkelleeidkqgerLaesrtiedlkkYkk 70 
                 ++++  s+++ ++ ++    +              + ++++  +++ e+++ ++ ++d ++Yk+
  KHJ32538.1 174 HQSQLHSDSVANTLQQ----DesysndsipkcidlFRNVKKSYKSKYENMSLRQRYADHNDYKN 233
                 2333333333222222....01222344455444444444444445555555555544444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1453  (0.0810419); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2953.57
//
Query:       KHJ32539.1  [L=292]
Description: putative nitrilase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-56  192.0   0.0    1.3e-56  191.8   0.0    1.0  1  CN_hydrolase  Carbon-nitrogen hydrolase


Domain annotation for each model (and alignments):
>> CN_hydrolase  Carbon-nitrogen hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.8   0.0   7.4e-61   1.3e-56       1     260 [.      10     270 ..      10     271 .. 0.91

  Alignments for each domain:
  == domain 1  score: 191.8 bits;  conditional E-value: 7.4e-61
                   EEEEEEBB-STTHHHHHHHHHHHHHHHHHHTTESEEEEETTTTTBSSSHHHHHHHHB........HSSSHHHHHHHHHHHHHTEEEEEEEEEEEC.C CS
  CN_hydrolase   1 rvAvvQlpqkaadleanlqklleliaeAarkgadLivlPElfitgykeeahfleaAe........aglgetlallaalarkngiavviglierel.t 88 
                   ++A+vQl++   d+++nl+++ e + +A r+ga++++lPE+f+ +y   + f ++Ae        ++++++ ++l+ +a++  +++v+g i++ +  
    KHJ32539.1  10 KIALVQLASG-NDKTENLERAREKVLQASRQGANIVILPECFNSPY-GCDYFSKYAEtllpsppsKVKSPSWHALSSVAKDASCYLVGGSIPELDtS 104
                   69*******6.7**********************************.44555555666667778*************************88875534 PP

                   TTEEEEEEEEEEEETTSEEEEEEE-SS--E.ECTTSCECCGHHTSCS-SSS-EE.EETTEEEEEEEGGGGGSHHHHHHHHHTT-SEEEE.BH.GCCC CS
  CN_hydrolase  89 ngklqayntavlldldgklvgkyrKlhLfp.geprpptaverelfepgdgipvf.dtpvgkiGaaiCyeigfpellralalkgaeilvn.lserapv 182
                    +k  +ynt +++++ g+l++ +rK+hLf+ ++p++  + e+ ++++g++i+ +  +++gki + iCy+i+fpe +++ a+kga  lv+ +     +
    KHJ32539.1 105 TQK--YYNTSLVFSPLGELLATHRKVHLFDiNIPGKIFFQESDVLSAGNKITLVdFPEYGKIAIGICYDIRFPEMAIIAARKGAFCLVYpG----AF 195
                   444..6********************************************8888355666*****************************62....46 PP

                   TCHHHHHHHHHHHHHHHHHHTSEEEEEEBEEEHCETTEEEE--EEEE-TTS-EEEECCSSSTEEEEEEEEHHHHHHHH CS
  CN_hydrolase 183 pksmgppqwellgraralengcfviaanqvggyeqlilwpvghSaiidpdGrilaglgeeeegvliaeidladvratr 260
                      +gp +w+llg+ara++n+c+v+ ++++ +  + +++ +ghS ++dp G+i+a++ e e +++ a+id ++++++r
    KHJ32539.1 196 NTTTGPLHWNLLGKARAVDNQCYVALCSPARN--KAGYMAYGHSLVADPMGNIIAEAEEGE-QTVFADIDGEKIEQAR 270
                   679*****************************..***********************9999.6*********999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       338  (0.0188521); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.21s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2251.81
//
Query:       KHJ32540.1  [L=184]
Description: putative pal1-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       244  (0.0136092); expected 358.6 (0.02)
Passed bias filter:                      229  (0.0127726); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.21s 00:00:00.56 Elapsed: 00:00:00.35
# Mc/sec: 1582.56
//
Query:       KHJ32541.1  [L=351]
Description: putative transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.9e-19   67.8  13.1    2.6e-11   43.5   0.1    4.3  4  Myb_DNA-binding  Myb-like DNA-binding domain
      1e-16   60.9   9.0    1.2e-09   38.3   0.2    3.5  3  Myb_DNA-bind_6   Myb-like DNA-binding domain
    0.00012   22.4  10.1    0.00034   20.9   0.6    3.5  3  Myb_DNA-bind_4   Myb/SANT-like DNA-binding domain
     0.0027   18.0   7.9       0.16   12.3   0.2    3.8  3  MADF_DNA_bdg     Alcohol dehydrogenase transcription factor M


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.8      0.23     1e+03      35      44 ..      80      89 ..      24      90 .. 0.67
   2 !   43.5   0.1   5.9e-15   2.6e-11       1      46 []      93     137 ..      93     137 .. 0.98
   3 !   28.2   0.4   3.7e-10   1.6e-06       4      44 ..     148     206 ..     147     208 .. 0.93
   4 ?    1.8   0.0     0.065   2.9e+02      10      27 ..     247     270 ..     245     279 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.23
                     HHHHHHHHHH CS
  Myb_DNA-binding 35 ekqcrsrwrn 44
                      ++cr +++n
       KHJ32541.1 80 INACRRKFHN 89
                     4778888876 PP

  == domain 2  score: 43.5 bits;  conditional E-value: 5.9e-15
                      CSSSBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgkWteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwrnyl 46 
                      rg+Wt+  de L+ a++++ ++Wk I e + +R +++cr+rwrnyl
       KHJ32541.1  93 RGSWTASQDEELAAAHEQYPGKWKMIGEIM-NRFPEDCRDRWRNYL 137
                      89****************************.8*************7 PP

  == domain 3  score: 28.2 bits;  conditional E-value: 3.7e-10
                      SBHHHHHHHHHHHHH........HT.TC........HHHHHHHHT.SS-HHHHHHHHHH CS
  Myb_DNA-binding   4 WteeEdelLleavkk........hG.nr........WkkIaerlg.gRtekqcrsrwrn 44 
                      W  eE+++L   v +        hG  +        W +I++++g +R++ qc  +w+ 
       KHJ32541.1 148 WEFEEEKKLRSIVSEyldnyrrnHGlTDvnelevidWPTISKMMGyTRSRLQCSTKWKV 206
                      999************9999999988877889**************************86 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.065
                      HHHHHHHHHHTTC......HHHHH CS
  Myb_DNA-binding  10 elLleavkkhGnr......WkkIa 27 
                      +lLl+a+++ G++      W  I 
       KHJ32541.1 247 LLLLRAIRECGVKqvkkvpWVQIG 270
                      589********6557788887775 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.2      0.22   9.7e+02      18      41 ..      62      89 ..      25      94 .. 0.71
   2 !   38.3   0.2   2.7e-13   1.2e-09       1      43 [.      96     137 ..      96     146 .. 0.94
   3 !   25.9   0.4   1.9e-09   8.4e-06       1      48 [.     148     212 ..     148     234 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.22
  Myb_DNA-bind_6 18 ndWknIaealn..rRtp..kqcfdrwkn 41
                    n Wk   e l+   ++   ++c+++++n
      KHJ32541.1 62 NLWKFLREKLPnlPKQNviNACRRKFHN 89
                    4577777777447344444889999988 PP

  == domain 2  score: 38.3 bits;  conditional E-value: 2.7e-13
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwknkL 43 
                     Wt+  de+L+  +e+y  +Wk I e++n R p++c+drw+n L
      KHJ32541.1  96 WTASQDEELAAAHEQYPGKWKMIGEIMN-RFPEDCRDRWRNYL 137
                     ****************************.************77 PP

  == domain 3  score: 25.9 bits;  conditional E-value: 1.9e-09
  Myb_DNA-bind_6   1 WteeEdeiLlklveky.gn................dWknIaealn.rRtpkqcfdrwknkLrpkis 48 
                     W  eE+++L+++v++y  n                dW +I+++++  R+ +qc  +wk  ++ +++
      KHJ32541.1 148 WEFEEEKKLRSIVSEYlDNyrrnhgltdvneleviDWPTISKMMGyTRSRLQCSTKWKV-IKERYE 212
                     888************8622466788899999*************99************9.766554 PP

>> Myb_DNA-bind_4  Myb/SANT-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.6     0.083   3.7e+02      27      64 ..      52      91 ..      35     101 .. 0.78
   2 ?    4.3   0.1     0.012        54      38      62 ..     116     135 ..      91     137 .. 0.73
   3 !   20.9   0.6   7.7e-08   0.00034       4      72 ..     148     216 ..     146     233 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.083
                    H....SS--HHHHHHHHHHHHHHC----HHHHHHHHHHHH CS
  Myb_DNA-bind_4 27 e..rgkkrnkklWeevaeamaergykrspeqCkeKienLk 64
                    +  +++  +++lW+   e++ +   +     C++K++n +
      KHJ32541.1 52 KdaKKNEDARNLWKFLREKLPNLPKQNVINACRRKFHNFE 91
                    2445678888899999999999988888999999999865 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.012
                     HHHHHHHHHHC----HHHHHHHHHH CS
  Myb_DNA-bind_4  38 eevaeamaergykrspeqCkeKien 62 
                     + + e      ++r pe C+++++n
      KHJ32541.1 116 KMIGEI-----MNRFPEDCRDRWRN 135
                     444444.....57889*******98 PP

  == domain 3  score: 20.9 bits;  conditional E-value: 7.7e-08
                     S-HHHHHHHHHHHHH..HHHHHHH.......SS--HHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHCSSS CS
  Myb_DNA-bind_4   4 WteeetklLieawgerilelrfqe.....rgkkrnkklWeevaeamaergykrspeqCkeKienLkkrYkkeke 72 
                     W+ ee k L ++++e +l++ +++      +++    +W  +++ m   gy+rs  qC +K++ +k rY++  +
      KHJ32541.1 148 WEFEEEKKLRSIVSE-YLDNYRRNhgltdVNELEVI-DWPTISKMM---GYTRSRLQCSTKWKVIKERYETGDD 216
                     9999***********.78876666788854444444.899999887...9*******************98666 PP

>> MADF_DNA_bdg  Alcohol dehydrogenase transcription factor Myb/SANT-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.5     0.049   2.2e+02      17      51 ..      52      89 ..      35      93 .. 0.63
   2 !    5.7   0.1    0.0041        18      27      51 ..     113     135 ..      96     139 .. 0.84
   3 !   12.3   0.2   3.6e-05      0.16      28      76 ..     183     229 ..     167     235 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.049
  MADF_DNA_bdg 17 pdyrnkekrekaweeiaeel.nekvdvee....ckkkwkn 51
                  +d +++e   + w+ + e+l n  +++++    c++k++n
    KHJ32541.1 52 KDAKKNEDARNLWKFLREKLpN--LPKQNvinaCRRKFHN 89
                  5566666677777777777743..5543334447766665 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0041
  MADF_DNA_bdg  27 kaweeiaeelnekvdveeckkkwkn 51 
                     w+ i e +n     e+c+ +w+n
    KHJ32541.1 113 GKWKMIGEIMN--RFPEDCRDRWRN 135
                   57********9..66679*****98 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 3.6e-05
  MADF_DNA_bdg  28 aweeiaeelnekvdveeckkkwknLRdryrrelrkkksseskekkkskw 76 
                    w +i++ ++ + +  +c +kwk +++ry+     ++  +s+  ++ +w
    KHJ32541.1 183 DWPTISKMMGYTRSRLQCSTKWKVIKERYETGDDDME--TSDPLSAAPW 229
                   6*********999**9*************98766666..5555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       830  (0.0462937); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 2746.40
//
Query:       KHJ32542.1  [L=135]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0094   16.3   0.1      0.023   15.1   0.1    1.6  2  GP68      Phage protein Gp68
  ------ inclusion threshold ------
      0.068   13.5   0.0      0.093   13.0   0.0    1.2  1  DUF4226   Domain of unknown function (DUF4226)


Domain annotation for each model (and alignments):
>> GP68  Phage protein Gp68
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   2.6e-06     0.023      12      61 ..      18      67 ..      11      72 .. 0.92
   2 ?   -2.2   0.0      0.65   5.8e+03      22      28 ..     100     106 ..      88     115 .. 0.63

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.6e-06
        GP68 12 spiaphetagvlrmrraGykGaailkllklrGtrlvnqmqraldaetaaa 61
                 p  p    ++ r  r+G   ++ lk+++  G r  + + ra  ae+ a+
  KHJ32542.1 18 GPHRPDSRKCLARPTRNGAPTKEQLKIIRQAGDREFQAVLRAKAAEERAS 67
                588899999************************************99875 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.65
        GP68  22 vlrmrra 28 
                  lr+rr+
  KHJ32542.1 100 ALRLRRT 106
                 4566654 PP

>> DUF4226  Domain of unknown function (DUF4226)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0     1e-05     0.093      61     101 ..      39      79 ..      26      88 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1e-05
     DUF4226  61 tqalaldTpaGarqfqrfLiaklreiakvVadasedsrska 101
                 + +l++  +aG r+fq  L ak+ e ++ V ++++d++  +
  KHJ32542.1  39 KEQLKIIRQAGDREFQAVLRAKAAEERASVLEGNSDEEPSQ 79 
                 444788889*****************999999999987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       343  (0.019131); expected 358.6 (0.02)
Passed bias filter:                      257  (0.0143343); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.20s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 1099.54
//
Query:       KHJ32543.1  [L=280]
Description: hypothetical protein EV44_g0356 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-05   23.2   0.0    5.8e-05   22.4   0.0    1.4  1  SKG6      Transmembrane alpha-helix domain


Domain annotation for each model (and alignments):
>> SKG6  Transmembrane alpha-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   3.3e-09   5.8e-05       1      35 [.     169     201 ..     169     203 .. 0.93

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 3.3e-09
        SKG6   1 psdssnsntvaIavaVaVPVaViiivLlailifvr 35 
                 ps+++ + ++ ++ +V++P++  ++ L+++l+  +
  KHJ32543.1 169 PSNNDQNIGTMVGLGVGIPLGLLVAGLIGFLF--Y 201
                 79999999***********************9..4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       507  (0.0282782); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 2058.39
//
Query:       KHJ32544.1  [L=330]
Description: putative transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2582.83
//
Query:       KHJ32545.1  [L=220]
Description: putative prp38 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-59  200.3   0.0    2.5e-59  200.0   0.0    1.1  1  PRP38     PRP38 family


Domain annotation for each model (and alignments):
>> PRP38  PRP38 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.0   0.0   1.4e-63   2.5e-59       4     173 ..      24     187 ..      21     188 .. 0.98

  Alignments for each domain:
  == domain 1  score: 200.0 bits;  conditional E-value: 1.4e-63
       PRP38   4 ngqnptlliekivrerIleseYykenlfglkalaelvdeiveklkhieglvlggtekpstflClllKLlqlkptkkqieelln..nedskYiralgllY 100
                 ng np++++ek vrerI++++++k ++f++++ a++v+++v+++++i+g ++g +++ps+flCl++KLlql p++++++e+l+   e++kY+ral+l+Y
  KHJ32545.1  24 NGLNPATIMEKPVRERIVDCYFWKDQCFAVNE-ADVVNRVVQSVNFIGG-TYGDSQRPSPFLCLAFKLLQLSPSDEILQEYLQygGEKFKYLRALALFY 120
                 789*****************************.****************.*********************************9999************ PP

       PRP38 101 lRlvlepkelykllepllnDyrklkrrekdgevdpkgvklitidelvddLltkdricgtiLprlpkrakleee 173
                 +Rl+ +pk++y++lep+l+Dyrkl+ r++ g      ++l+++d +vddLltkdr+cgt+L+++pkr+ le+ 
  KHJ32545.1 121 IRLTRQPKNIYEILEPYLSDYRKLRKRSRIG------TSLTYMDVFVDDLLTKDRVCGTTLWKIPKRTVLEDL 187
                 ***************************9999......9******************************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       264  (0.0147247); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1572.71
//
Query:       KHJ32546.1  [L=665]
Description: putative impb mucb samb family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-40  138.6   0.0    2.8e-40  137.7   0.0    1.5  1  IMS           impB/mucB/samB family
    4.4e-10   40.3   0.0    8.9e-10   39.3   0.0    1.5  1  IMS_C         impB/mucB/samB family C-terminal domain
      1e-08   34.6   2.8    2.1e-08   33.6   2.8    1.6  1  zf_UBZ        Ubiquitin-Binding Zinc Finger
  ------ inclusion threshold ------
       0.04   14.3   0.1       0.13   12.7   0.1    1.8  1  IMS_HHH       IMS family HHH motif
       0.11   12.9   0.4        1.9    9.0   0.0    2.4  2  Sperm_Ag_HE2  Sperm antigen HE2
       0.41   11.1   2.6       0.97    9.9   1.5    2.3  2  zf-C2HE       C2HE / C2H2 / C2HC zinc-binding finger


Domain annotation for each model (and alignments):
>> IMS  impB/mucB/samB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.7   0.0   9.5e-44   2.8e-40       1     149 [.      47     274 ..      47     275 .. 0.95

  Alignments for each domain:
  == domain 1  score: 137.7 bits;  conditional E-value: 9.5e-44
                 EEETTHHHHHHHHHT.T-.TTS-EEEEET....TEEEEE-HHHHTTT--TTSBHHHHHTTHTT-EEE.........................EEE-HHH CS
         IMS   1 iDmdaFyasverardpeL.kgkPvvvaqgsekrgiviavsyeArayGvkrgmrikeakklcpdlivv.........................kvdleky 73 
                 +D+daFya++e++r  +  ++kP++v+q+    + +ia++y+Ar++G +r+ ++ eakklcpdli+                          kv+l++y
  KHJ32546.1  47 VDLDAFYAQCEMVRL-NVpENKPLAVQQW----QGLIAINYAAREFGLSRHVNVVEAKKLCPDLILQhvptwkeghekwayhddasrnmathKVSLDPY 140
                 7*************9.788**********....9*****************************999999****************************** PP

                 HHHHHHHHHHHHHH-S.....EEEEETTEEEEE-HH..HHHHHH-S..................................................... CS
         IMS  74 rraskkileilkrfis...pkvekasiDEayldltg..leelaese..................................................... 114
                 r +s++i++++k++ +   +kvekas+DE++ldl++  +      +                                                     
  KHJ32546.1 141 RLESRRIISCIKDHLPvdlQKVEKASVDEVFLDLSAqvH--STLLDrypelagpppyddpteflppppstaldwkadalvdlssgetedddpdwddiai 237
                 **************9866667***************643..333334699************************************************* PP

                 ..HHHHHHHHHHHHHHHH---EEEEEESSHHHHHHHH CS
         IMS 115 ..gaalakelrkaikeelgltvsiGiasnkllAKlas 149
                   g+++++ lr++i++ l++++s+Gia+nk+lAKl s
  KHJ32546.1 238 liGSEIIRDLRAKIFKALKYKCSAGIAQNKMLAKLGS 274
                 **********************************987 PP

>> IMS_C  impB/mucB/samB family C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.3   0.0     3e-13   8.9e-10       5     109 ..     360     472 ..     356     476 .. 0.89

  Alignments for each domain:
  == domain 1  score: 39.3 bits;  conditional E-value: 3e-13
       IMS_C   5 rpepksissektfpepyd.esklkkelreLaeelarrLrdkg.....lvartitlklrysdfhasrsatLpr.ptsdtreileaalkLlrrlide.pgl 95 
                 r + ks+ s k+f + ++ ++++  +lr +a++++ rL+++g     + ++t+ l++r   +++srs++Lp   + d+  i+e  ++Ll++++ + + +
  KHJ32546.1 360 RTQIKSMLSAKSFRPSIKtPEQAYPWLRIFAADIHSRLVEEGvlefkRRPKTMNLHYRQGIQNRSRSCSLPLgKRLDEIGIFEISKNLLNQVVEDgQIW 458
                 7889***********4444767999*****************777777*********966666*********777************************ PP

       IMS_C  96 pirligvsasnlve 109
                 p++++++s +++++
  KHJ32546.1 459 PCTNLSLSIGGFED 472
                 **********9994 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   2.8   7.1e-12   2.1e-08       3      32 .]     590     620 ..     588     620 .. 0.94

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 7.1e-12
      zf_UBZ   3 ylCerCgkeipes.elqEHeDwHfAkdLqee 32 
                  +C rC++++ ++ +lq+H+DwH+A++L++e
  KHJ32546.1 590 LICTRCKEQLDSPnALQSHQDWHLAQELHNE 620
                 58**************************987 PP

>> IMS_HHH  IMS family HHH motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   4.3e-05      0.13       6      27 ..     292     313 ..     289     318 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4.3e-05
     IMS_HHH   6 efLwplpitkipGiGgklgekL 27 
                 +fL++l++ ki+G+Ggklge++
  KHJ32546.1 292 NFLSKLKFLKIRGLGGKLGEQI 313
                 69******************96 PP

>> Sperm_Ag_HE2  Sperm antigen HE2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0   0.00064       1.9      14      36 ..     493     515 ..     490     529 .. 0.85
   2 ?    1.2   0.1      0.17   5.2e+02      23      58 ..     564     599 ..     562     603 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00064
  Sperm_Ag_HE2  14 LfpGsSrassvnhqategprelr 36 
                   +f+G+S+ +s+nh   e+ r l+
    KHJ32546.1 493 MFSGNSKSESINHDHSEKRRRLE 515
                   9***************9988865 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.17
  Sperm_Ag_HE2  23 svnhqategprelreespgqgtngsqllhhqvkryl 58 
                   + +h++te    l++e +    n+s+l+  + k++l
    KHJ32546.1 564 KLHHENTESEVRLNDENLHDVGNKSDLICTRCKEQL 599
                   679******9999***************99999987 PP

>> zf-C2HE  C2HE / C2H2 / C2HC zinc-binding finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.4     7e+03       4      32 ..     483     511 ..     482     518 .. 0.79
   2 ?    9.9   1.5   0.00032      0.97      21      57 ..     573     608 ..     541     618 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.4
     zf-C2HE   4 FFvpledlpeelekdgeieslseeqskel 32 
                 F v+ +d  ++++ + + es+++++s++ 
  KHJ32546.1 483 FLVKGKDAMAMFSGNSKSESINHDHSEKR 511
                 88888999999999999988888887764 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00032
     zf-C2HE  21 ieslseeqskelilktpLkCtrCganfgnkfpkLKeH 57 
                   +l++e+   +  k++L+CtrC+ ++  +  +L +H
  KHJ32546.1 573 EVRLNDENLHDVGNKSDLICTRCK-EQLDSPNALQSH 608
                 24677777777889**********.888887777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (665 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       813  (0.0453455); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.41
# Mc/sec: 4900.74
//
Query:       KHJ32547.1  [L=183]
Description: hypothetical protein EV44_g0112 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       836  (0.0466284); expected 358.6 (0.02)
Passed bias filter:                      606  (0.0338); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1326.84
//
Query:       KHJ32548.1  [L=489]
Description: putative dhhc zinc finger membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-30  103.8   0.3    7.5e-30  103.8   0.3    3.1  3  DHHC        DHHC palmitoyltransferase
  ------ inclusion threshold ------
      0.074   13.0   0.3       0.15   12.0   0.3    1.4  1  TarH        Tar ligand binding domain homologue


Domain annotation for each model (and alignments):
>> DHHC  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   4.3     0.044     4e+02      57     114 ..      21      71 ..      11      80 .. 0.53
   2 !  103.8   0.3   8.4e-34   7.5e-30       6     131 ..     132     249 ..     128     252 .. 0.89
   3 ?    1.4   0.0     0.036   3.2e+02      39      53 ..     399     413 ..     393     416 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.044
        DHHC  57 ylllllilalvlllialvklveeekkseflavtllkkllsilllvlsllfllllglll 114
                  l+l++ +++++ +  l++++   kk++  ++       + +ll+++ll ++l++++l
  KHJ32548.1  21 LLILVAGYITYVVVRLLSVNYLLAKKNDKVTA-------VSILLIYCLLSMVLIASFL 71 
                 44555566666666666666666655544433.......2444555555555444443 PP

  == domain 2  score: 103.8 bits;  conditional E-value: 8.4e-34
        DHHC   6 kfCstcniykpprskHcrvCnrcvlrfDHhCpwlnnciGerNykyFllfllylllllilalvlllialvklveeekkseflavtllkkllsilllvlsl 104
                  +Cs c  +kp+r++Hc++++rc+ ++DH+Cpw++  +Ge N+k+F++f  y +l+++++l++  ++ ++  +++ ++ ++a+        i++l l+ 
  KHJ32548.1 132 FWCSLCANWKPDRAHHCSQTGRCIKKMDHFCPWVGGPVGESNFKFFIQFTTYGALYCTYVLIVVATITSSRQKNDGEQIETAF--------IITLGLAS 222
                 59*********************************************************999887777766666666544433........9******* PP

        DHHC 105 lfllllgllllfhlylilrnlTtieam 131
                  fll+ g + l  + l+++n+T+ e++
  KHJ32548.1 223 TFLLFSGGMSLHGIRLAVTNMTQVERI 249
                 ************************987 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.036
        DHHC  39 lnnciGerNykyFll 53 
                  +nc  + Ny+ F++
  KHJ32548.1 399 AKNCLNQTNYRTFVI 413
                 579**********86 PP

>> TarH  Tar ligand binding domain homologue
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.3   1.7e-05      0.15       6      45 ..     209     248 ..     208     260 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.7e-05
                 XXXXXXXXXXXXXXXXXXXXXSSSSSSHHHHHHHCHHHHH CS
        TarH   6 sIrtrLllvlallgvLllvsgglglsglsrsndalrevyt 45 
                 +I t ++++l+l + +ll sgg++l+g++ +  ++++v++
  KHJ32548.1 209 QIETAFIITLGLASTFLLFSGGMSLHGIRLAVTNMTQVER 248
                 5899*******************************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       761  (0.0424452); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3713.28
//
Query:       KHJ32549.1  [L=551]
Description: putative glycylpeptide n-tetradecanoyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-85  286.5   0.4    1.7e-85  285.8   0.4    1.3  1  NMT_C           Myristoyl-CoA:protein N-myristoyltransferase,
    1.5e-74  249.2   0.0    4.3e-74  247.7   0.0    1.8  2  NMT             Myristoyl-CoA:protein N-myristoyltransferase,
    0.00092   19.3   0.0     0.0073   16.4   0.0    2.1  2  Acetyltransf_9  Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
      0.094   13.0   2.8        2.1    8.6   0.7    2.6  2  Ribosomal_L21p  Ribosomal prokaryotic L21 protein


Domain annotation for each model (and alignments):
>> NMT_C  Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  285.8   0.4   3.7e-89   1.7e-85       1     209 []     334     549 ..     334     549 .. 0.95

  Alignments for each domain:
  == domain 1  score: 285.8 bits;  conditional E-value: 3.7e-89
                 HTTSS--BTTS-HHHHHHHH---SS-SSTTEEE--CCCHHHHHHHHHHHHTTSSEEEE--HHHHHHHHC-SSTTSBTTTEEEEEEEETTS.EEEEEEEE CS
       NMT_C   1 evgFsalprnstlarlvklyklpeetktkglremeekDveavtellekylkrfdlaqvfseeeveHwllskkkkreeqvvwsYVvedeetkkitDfvSF 99 
                 evgFs+lp++s+ + ++++y+lpe+t+tk+lr+me+kD++ v +ll++yl++f+l  vf++e+v+Hwl++kk + ++qv+wsYVved++tk++tDf+SF
  KHJ32549.1 334 EVGFSPLPAKSKPSYQIRKYALPETTSTKNLRPMESKDIDGVLSLLRRYLNKFQLGLVFTREDVAHWLVNKKISGSDQVIWSYVVEDPTTKNLTDFFSF 432
                 79********************************************************************999************************** PP

                 EE--EEETT-SS-SEEEEEEEEEEEECCC.......TTHHHHHHHHHHHHHHHHHHCTESEEEEESSTTGGGCTTTTT-EEEEEEEEEEEETEEE.-.. CS
       NMT_C 100 YslpstvlknpkhktlkaAYlfyyastet.......kklkkrlkeLvkdalilakkakfDvfnaltlmdnklfleelkFgagdgkLnYYLyNyrvapia 191
                 Y+l+s+v++++khk+++aAYlfyya+++        ++ + +l++L++dalilakk kfDvfnaltlmdn+lfle++kFgagdg+L+YYLyNy++ pia
  KHJ32549.1 433 YALESSVINHNKHKSIRAAYLFYYATEHGlsnemphNEYTIHLNSLINDALILAKKYKFDVFNALTLMDNNLFLEQQKFGAGDGQLHYYLYNYNTIPIA 531
                 *************************5555444445556666********************************************************** PP

                 -SB-CCGSB.TT..BEXX CS
       NMT_C 192 ggvkeekeleekkgvGvv 209
                 ggv+++++ e  ++vGvv
  KHJ32549.1 532 GGVDRKNSIEGLSEVGVV 549
                 *******99988899997 PP

>> NMT  Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.7   0.0   9.7e-78   4.3e-74       6     160 .]     166     320 ..     162     320 .. 0.98
   2 ?   -2.3   0.0      0.77   3.5e+03      16      95 ..     353     433 ..     343     453 .. 0.55

  Alignments for each domain:
  == domain 1  score: 247.7 bits;  conditional E-value: 9.7e-78
                 --GGGS-SS----STTEEEEE--TTSHHHHHHHHHHHHHHSSCTTTSTEEE---HHHHHHHCTSTT--GGGEEEEEETTTTEEEEEEEEEEEEEEETTE CS
         NMT   6 kkveevrkeplklpkgfewvtvdledeeelkevyelLsenYvedddamfrfkyskeflkWalkppgykkewhvgvrvkkskkLvafisaipvklrvrkk 104
                  ++e+v+kep +l++gf wvt+dl+d++e++e+++lL+ +Yvedd + frf+ysk+flkWal++pg++k+whvgvr+++s+kLvafisaipv lrvr++
  KHJ32549.1 166 IDIEQVPKEPGPLVDGFDWVTMDLTDDKEIEELFTLLYGHYVEDDGSLFRFNYSKSFLKWALMSPGWTKDWHVGVRASASRKLVAFISAIPVALRVRNN 264
                 5789*********************************************************************************************** PP

                 EEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EEEEEESSTSSSESEEE CS
         NMT 105 vlklveinfLcvhkklRskrlapvlikEitRrvnlkgifqavytagvvlpkpvstC 160
                 +l+++e+nfLc+hkklRskrlapvlikEitRr+ l+g +qa+ytagvvlpkp+stC
  KHJ32549.1 265 TLHASEVNFLCIHKKLRSKRLAPVLIKEITRRCYLRGTWQAIYTAGVVLPKPISTC 320
                 *******************************************************9 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.77
                 ---STTEEEEE--TTSHHHHHHHHHHHHHHSSCTTTSTEEE---HHHHHHHCTSTT-...-GGGEEEEEETTTTEEEEEEEEE CS
         NMT  16 lklpkgfewvtvdledeeelkevyelLsenYvedddamfrfkyskeflkWalkppgy...kkewhvgvrvkkskkLvafisai 95 
                 ++lp++ + +++   ++++++ v +lL++ Y++  +  + f+  +++ +W ++ +     +  w   v   ++k+L  f s  
  KHJ32549.1 353 YALPETTSTKNLRPMESKDIDGVLSLLRR-YLNKFQLGLVFT-REDVAHWLVNKKISgsdQVIWSYVVEDPTTKNLTDFFSFY 433
                 66666666667776777777777777753.554444444333.3445555554432210123466666666666666666554 PP

>> Acetyltransf_9  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.6e-06    0.0073      22     111 ..     217     306 ..     187     330 .. 0.83
   2 ?    0.2   0.0      0.16   7.3e+02       2      22 ..     364     384 ..     363     416 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.6e-06
                     T----H..HHHHHHHHHHTTSEEEEEEE..TTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-CCGTTS-HHHHHHHHHHHHHHHTT--EEE CS
  Acetyltransf_9  22 qdeespleeireyfrklleesrvlgaed..ngelvgqlallplelnvpGktlkaagvtgVavapehrgrgvlskLlaraleemreegqplsl 111
                     ++++s l   ++  ++   +++++g++     +lv+ + ++p+ l+v+++tl+a  v   + + + r + ++  L+++  ++++ +g + ++
      KHJ32549.1 217 NYSKSFL--KWALMSPGWTKDWHVGVRAsaSRKLVAFISAIPVALRVRNNTLHASEVNFLCIHKKLRSKRLAPVLIKEITRRCYLRGTWQAI 306
                     3333333..477788888899999999988899**************************************************999887666 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.16
                     EEEE-GGGHHHHHHHHHHHTT CS
  Acetyltransf_9   2 irelteedldevlellkyaFq 22 
                     +r+++++d+d+vl+ll++  +
      KHJ32549.1 364 LRPMESKDIDGVLSLLRRYLN 384
                     799************998665 PP

>> Ribosomal_L21p  Ribosomal prokaryotic L21 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.7   0.00047       2.1      56      89 ..      26      59 ..       4      65 .. 0.80
   2 ?    3.4   0.1      0.02        90       9      40 ..      95     125 ..      93     141 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00047
                    STCEEEEEEEEEE---EEEEEEETTTTEEEEEEE CS
  Ribosomal_L21p 56 gakVeaevvehgkgkkiivfkkkrrknyrrkqgh 89
                    + +Vea+v ++  +  ++   kk++k++++ +g 
      KHJ32549.1 26 NDSVEAKVQDEQSNSVVVSSTKKKKKKTKKERGK 59
                    358******9999999999999999999999885 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.02
                     TEEEEESSSEEEEEESSSSSTTCEEEESSEEE CS
  Ribosomal_L21p   9 GkqykVeegdvlkvekleaevgdkveldkVll 40 
                     ++q  Ve g  l+ ek++ e  ++++l++++ 
      KHJ32549.1  95 SQQLSVEDGTNLTSEKIQ-ETLKQLKLEDIMT 125
                     689**************6.8889999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (551 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1344  (0.0749624); expected 358.6 (0.02)
Passed bias filter:                      576  (0.0321267); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 3806.94
//
Query:       KHJ32550.1  [L=868]
Description: putative dna mismatch repair protein msh4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-61  206.4   0.1    6.7e-61  205.6   0.1    1.4  1  MutS_V    MutS domain V
    5.2e-32  111.6   2.5    5.2e-32  111.6   2.5    1.7  2  MutS_III  MutS domain III
    2.6e-11   43.9   0.0    7.4e-11   42.5   0.0    1.7  1  MutS_II   MutS domain II
      6e-05   23.3   0.2    0.00016   21.9   0.2    1.8  1  MutS_IV   MutS family domain IV
  ------ inclusion threshold ------
      0.012   15.2   0.1       0.92    9.1   0.0    2.6  2  AAA_27    AAA domain


Domain annotation for each model (and alignments):
>> MutS_V  MutS domain V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.6   0.1   1.9e-64   6.7e-61       1     187 [.     563     750 ..     563     751 .. 0.96

  Alignments for each domain:
  == domain 1  score: 205.6 bits;  conditional E-value: 1.9e-64
                 EEEE-STTSSHHHHHHHHHHHHHHHHHT--BSSSEEEEE--SEEEEEE--------SS-HHHHHHHHHHHHHTT--TTSEEEEESTS-SS-HHHHHHHH CS
      MutS_V   1 llitGpnmaGkstylrqvalivllaqiGsfvpaekaeisivdkiftRvgasDdlakgkstFmvEmlEtasilknatekslvilDElGRGtstydGlaia 99 
                 ++itG+nm+Gksty+r++al++++aq+Gsfvpa++a+++++ ++f+Rv+ +D+ + + stF  Em Eta il+n++++sl i+DElGRGts+ dGl+ia
  KHJ32550.1 563 QIITGCNMSGKSTYIRSIALMTIMAQVGSFVPASYASFPLITQLFARVSIDDSNEANISTFASEMRETAFILRNINKNSLAIFDELGRGTSSRDGLSIA 661
                 59************************************************************************************************* PP

                 HHHHHHHHHTT--EEEEEES-GGGGGHHHHSTTEEEEEEEEEEET.TEEEEEEEEEES--SS.--HHHHHHHTT--HHHHHHHHHHHHHT CS
      MutS_V 100 lavaeyllekikaktlfatHyheltklaekleevknlhlavkeee.edivflykvkegaaek.syGikvaklaglPesvverArevlkel 187
                  ++ e l+e + a   fatH+ el+++ ++ + v nlhlav  ++ ++i++lyk++eg  ++  yG+  a+++glP  +++ A++v+ +l
  KHJ32550.1 662 ISISEALIE-TGAIIWFATHFRELAQILSERPGVVNLHLAVGMSNeNTITMLYKIEEGCVKEwHYGLPLARVIGLPPLILDVAENVTMAL 750
                 ********8.8******************************8655499**********987538********************998776 PP

>> MutS_III  MutS domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.6   2.5   1.5e-35   5.2e-32       1     190 [.     204     513 ..     204     514 .. 0.83
   2 ?   -3.4   0.1       2.6   9.3e+03     100     103 ..     793     796 ..     744     843 .. 0.53

  Alignments for each domain:
  == domain 1  score: 111.6 bits;  conditional E-value: 1.5e-35
                 HHHHHTTSSS-TTS.SSSS-HHHHH---SSHHHHHHHHHHHH--BS-HHHHHHHHHHHHH.T..TT.HHHHHHHHTT---HHHHHHHHHTT---HHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III   1 aTlrnLeilenlrggskegsLlgvldrTvTamGaRlLrewllqPltdleeInaRldaVee.leneelreelrellrrlpDleRllsrislgkakardlk 98 
                 +T+++Le+++nl++++++ +L+g++++T T+mGaRlL++++lqP+++ e++++R+ a ee +++ee+  + r++l++++D+eRll+++     k  d++
  KHJ32550.1 204 STVQSLELIQNLHNSKSKDCLFGLMNETLTPMGARLLKSNILQPSIQEEVLTQRYHALEElITKEEVFMQTRQALKSVHDIERLLTSLIVLPTK-PDIR 301
                 69*********66667789*****************************************999999999999**************88884333.3432 PP

                 H..........HHHHHHHHHTTTTT---SSTHHHHH.......HHHH...HHHHHHB-SS--SSGGGS--B-T.......................... CS
                 x..........xxxxxxxxxxxxxxxxxxxxxxxxx.......xxxx...xxxxxxxxxxxxxxxxxxxxxxx.......................... RF
    MutS_III  99 a..........llealkaleelvallekeklaesee.......esla...elleeaideeplalekegedlra.......................... 151
                            l + ++ ++ + ++l+  +++  +        e+++    l++e +++++ +++k + dlr+                          
  KHJ32550.1 302 YseqlinhilmLKSFMEVIPLIYNALGGARSELLSTirdnfcpENIErtiYLIKE-VINDDVSYQKTPLDLRNqrtyavksgvsglldvarqtfkeate 399
                 2223222333334444444444444433333222224444443344444579998.******************************************* PP

                 ...........................................................................HHHHH..HHHHHHHHHHHHHTHHH CS
                 ...........................................................................xxxxx..xxxxxxxxxxxxxxxxx RF
    MutS_III 152 ...........................................................................ieale..qelfqelleeveealer 173
                                                                                                +  ++ +qel+++++ +++ 
  KHJ32550.1 400 dvhqhilelnqrleidaetrydnsrryyirvlevdfegrsppeilincfrtkgyiecqtldlvklnqriedshqeVI--LmsDKTIQELIDNIRGEVPI 496
                 ********************************************************************999885433..346999**********9*** PP

                 HHHHHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxx RF
    MutS_III 174 lrrlaealaeLDvllSl 190
                 l+r++e++a+LD+ +++
  KHJ32550.1 497 LFRICESIAMLDMVTAF 513
                 **************998 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.6
                 HHHH CS
                 xxxx RF
    MutS_III 100 llea 103
                 ll+ 
  KHJ32550.1 793 LLSW 796
                 2222 PP

>> MutS_II  MutS domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   2.1e-14   7.4e-11       2     126 ..      45     177 ..      44     186 .. 0.86

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 2.1e-14
                 EEEEEEEE.TTTSEEEEEEEETTTTEEEEEEEEE...-HHHHHHHHHH-ESEEEEESS-SCCCHHHHHHCHCTTT-EEEEESCCCCSHCC......HHH CS
     MutS_II   2 ylaAisek.regrrvGlafiDlstgefvvsefed...feeleaeLsrlsPkElllpedlsestaeeessklrelrsrvgvretvefesek......ase 90 
                  ++Aise  + +++vG+a+i++++ge v+s+++d   + +l++++  ++P+E+l+ ++   ++ + ++ ++ e+   +    t+++++ +        +
  KHJ32550.1  45 IICAISEGrGISPTVGFASINVTNGEAVLSQICDnqfYIRLLNKIEAIGPSEILIISNYGPPNPKSKMYSVIEENISCAKLVTIDRKYWSetagldYIQ 143
                 5899**99788888**********************************************999988999999999999999888777666333333578 PP

                 HCHHHB--STTTTTTTGGG-HHHHHHHHHHHHHCCC CS
     MutS_II  91 rleedfsvedldgfglekekklalaAlgalisYlee 126
                 +l+ ++ ve ++  ++  ++  a + l+a+++Y+e 
  KHJ32550.1 144 KLAFHHDVEAIKV-AV-AGNYFATCCLAAALKYIEL 177
                 8887888888888.56.9****************96 PP

>> MutS_IV  MutS family domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.2   4.6e-08   0.00016       3      92 .]     384     474 ..     382     474 .. 0.91

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 4.6e-08
                 SHHHHHHHHHHHHHHHHHHHHHCCCCCCCT-TTBEECCCSSSEEEEEE-TCC.CTTT--.SEEEEEECTCEEEEECCCHHHHHHHHHHHHHH CS
     MutS_IV   3 deeLdelrdrleelekeleeleekereklgikslkveynkvlGyylevtrse.akkvpk.efirlqtlknseryttaelkkleaelleaeee 92 
                 +  Ld +r++ +e++++ ++   ++ ++l+i    ++y++ + yy++v + + + + p+   i++  +k+++++ t +l kl++++ + ++e
  KHJ32550.1 384 SGLLDVARQTFKEATEDVHQHILELNQRLEI-DAETRYDNSRRYYIRVLEVDfEGRSPPeILINCFRTKGYIECQTLDLVKLNQRIEDSHQE 474
                 6679***************************.9999999999******9988788887746677999*******************999875 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00026      0.92      24      47 ..     558     581 ..     553     585 .. 0.88
   2 ?    2.9   0.1     0.019        70      72     126 ..     755     812 ..     743     819 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00026
      AAA_27  24 eeadlhliyGpNEAGKstalrAis 47 
                  ++++++i G N +GKst +r+i 
  KHJ32550.1 558 PQNRFQIITGCNMSGKSTYIRSIA 581
                 6899***************99985 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.019
      AAA_27  72 avleeadgeelefaRrk....grkktlldaddqalpeevlaallggldretFealFgLd 126
                 a+  +++ ++++++Rr+    g k+tl +a++  ++ ++l ++l+ l++e+  ++ g++
  KHJ32550.1 755 ATA-KKSSRSFAIVRRRklllGLKETLKQAEQGSMTGKALLSWLQKLQEEFVARMEGIQ 812
                 333.44556677777662444579999999999*****************999987776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (868 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       633  (0.0353059); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.70u 0.27s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 5860.27
//
Query:       KHJ32551.1  [L=307]
Description: putative f1 atpase assembly protein 11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-91  306.2   0.0    2.9e-91  306.0   0.0    1.0  1  ATP11     ATP11 protein


Domain annotation for each model (and alignments):
>> ATP11  ATP11 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  306.0   0.0   1.6e-95   2.9e-91       2     272 .]      40     300 ..      39     300 .. 0.90

  Alignments for each domain:
  == domain 1  score: 306.0 bits;  conditional E-value: 1.6e-95
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---.......SS--HHHHS-HHHHTTS CS
       ATP11   2 vlekYreKLeqkakeeglesieeLkeaykdkieekrkeaaaidleesksesekekeakasssektekkesaakskkkskskspvkpLssildleklkel 100
                 + ekYreKL++kake gl++ +eL++ yk+ki++ +k+    ++ + +s+ ++ +++++ ss+ ++   s  k++++s+ ++ +k+Ls ++d++k+++l
  KHJ32551.1  40 LFEKYREKLDKKAKELGLQDTNELRDVYKEKIDTLKKDL--CASLNLSSTPQEIHSKNTFSSSIQPPLPSPPKNSARSSLTPAIKNLSAYIDVDKTRAL 136
                 579**********************************88..33333333333344444444444455556666678999******************** PP

                 -HHHHHHHHHHHTTT-SSEEEEEEETTTHHHHHHHHHH--EEEEEEE-------..-EEEEEEEEEE..EETTEEEEEEEETTTTTT-HHHHS-SEEEE CS
       ATP11 101 pakeiealWrarhaskeeslcAvipaetYekmlatarkypqFvlPlpreeqeekeegaElhflqwafhepaektstvlfTsLaeYklrgefAqphttlt 199
                 p keiea+Wr+r +++ +slcAvip+  Y++m+  arkyp+F+lPl re+q     gaE+h+lqw+f  pae+ +t+l+T+Lae+klrge++qphtt+t
  KHJ32551.1 137 PLKEIEAIWRLRNMKNAQSLCAVIPLPLYQRMEGLARKYPSFILPLLRENQ-----GAEIHYLQWTF--PAENVVTILVTHLAEFKLRGEYSQPHTTIT 228
                 ************************************************777.....***********..9***************************** PP

                 EE-TTHHHH-EEEEEEEE-TTSS--HHHHHHHHHHHHHHTTGGG--SHHHHHHHHHHHHHHHT-TT--HHHHH CS
       ATP11 200 hytdLaeskglVLmrGevtedrglsveeAqlLvlalqrFYgaeaeekeeakerekLLedFtkgdeeFkveeLi 272
                 h++d+ae+k++VL++G+vte rg+sv+eA++L+++lqrFYg  + e+e++ ++++++e+F +gd +F++eeLi
  KHJ32551.1 229 HHLDMAEDKEIVLLQGNVTEGRGVSVDEAKWLLFCLQRFYGGLG-EDEKRGKKKEMVEMFGRGDISFNIEELI 300
                 *****************************************443.89*************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       707  (0.0394333); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2335.54
//
Query:       KHJ32552.1  [L=568]
Description: hypothetical protein EV44_g0814 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1083  (0.0604049); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3922.00
//
Query:       KHJ32553.1  [L=357]
Description: putative homoisocitrate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-93  312.1   0.1    1.7e-92  310.3   0.1    1.7  1  Iso_dh    Isocitrate/isopropylmalate dehydrogenase


Domain annotation for each model (and alignments):
>> Iso_dh  Isocitrate/isopropylmalate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  310.3   0.1   9.5e-97   1.7e-92       2     347 ..       8     352 ..       7     353 .. 0.93

  Alignments for each domain:
  == domain 1  score: 310.3 bits;  conditional E-value: 9.5e-97
                 EEEEEESTTHHHHHHHHHHHHHHHHHHHT-EEEEEE---THHHHHHHSSSS-HHHHHHHHHS.SEEEEEE---CSSSSSSHHH.HHHHHHHHTTEEEEE CS
      Iso_dh   2 iallegdgiGpevveaalkvlkaakekaglelefeevdvGgaaidetgeplpeetleaikea.dvvllgavgtpkekevrpen.gLlaLrkeldlfanl 98 
                 i l++gdgiG+ev++a  ++l+a+ +  +l++ef + ++G + +++tge+lpe t+++++++ d +l+gav +p  + v+ ++ +++aLrk+ldlfan+
  KHJ32553.1   8 IGLIPGDGIGKEVIPAGQRILEALPSSLNLKFEFVNLKAGFENFQQTGEALPERTVQILRDEcDGALFGAVSSPS-SAVKGYSsPIVALRKKLDLFANI 105
                 889********************************************************9877************.666766669************** PP

                 EEEE-BCCTTCCSSBTHHHHCT-EEEEEEE-SSCGGCSSEEEEETTG.GGGEEEEEEEEEHHHHHHHHHHHHHHHHHT............TTSEEEEEE CS
      Iso_dh  99 rpvkvfeklkvksplkrevveevdlvivReltggiYfgeekekkgsifteevavdtklyseeeieriaraafelAlkr............gkkkvtlvd 185
                 rpvk +      ++ kr    e+dlvivRe+t+++Y++ee++ + +  +++ a  +k++se++++ri ++a e+Al+r            +   vt+++
  KHJ32553.1 106 RPVKTV------NTAKR----EIDLVIVRENTEDLYVKEERTFEAT-DGSKIAEAVKRISERASSRISKIAGEIALRRekariageysihKSPLVTITH 193
                 ******......67786....69*******************9997.699*************************99955555555554223348999* PP

                 STTTTHHHH.HHHHHHHHHHCC.TTTTSEEEEEEHHHHHHHHHHSGGGGSEEEE-HHHHHHHHHHHHHHTTSGCC-EEEEEETSS-EEEEESS---CCC CS
      Iso_dh 186 Kanvlksse.lwrkiveevaee.eypdielehqlvDsaamqlvkspkqfdVivtkNlfGDilSDeaaalvGslGllpSaslgekkvaifEavHGsapdi 282
                 K+nvl++++ l+r +  +v+++ +++ +++e+q+vDs++++l ++p+++d+i+++Nl+GDilSD aaalvGslGl+pSa++g ++++i E++HGsapdi
  KHJ32553.1 194 KSNVLSQTDgLFRSTSRKVLSNqKFASVRVEEQIVDSMIYKLYRQPEAYDIILAPNLYGDILSDGAAALVGSLGLVPSANVG-DNFVIGEPCHGSAPDI 291
                 ******************998669**********************************************************.78************** PP

                 TTSS-S-THHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHH.TSCCHHHCTTSTCCCHHHHHHHH CS
      Iso_dh 283 agkdkaNpiavilSaalmLryslgleeaAdkiekAvekvlea.givTkDlageaakevstsefgda 347
                  gk++a pia++ S+almL++ l++ +aA  i+kAv+++l + + +  Dl+g a    +t++++++
  KHJ32553.1 292 MGKNIASPIATLRSVALMLEF-LNEGAAAVLINKAVDENLIDgKFLNPDLGGVA----TTTDVVED 352
                 *********************.***************9988868899*****99....78877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2451.66
//
Query:       KHJ32554.1  [L=616]
Description: hypothetical protein EV44_g4805 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0049   17.3   2.2     0.0049   17.3   2.2    5.5  5  APC_u15   Unstructured region on APC between APC_crr regions 


Domain annotation for each model (and alignments):
>> APC_u15  Unstructured region on APC between APC_crr regions 5 and 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   2.2   2.7e-07    0.0049      14      81 .]     109     175 ..     104     175 .. 0.91
   2 ?   -2.2   2.1      0.33     6e+03      33      45 ..     209     221 ..     182     265 .. 0.53
   3 ?   -2.2   0.1      0.32   5.7e+03      55      71 ..     254     270 ..     246     276 .. 0.74
   4 ?    0.1   2.9     0.064   1.1e+03      24      71 ..     280     329 ..     268     334 .. 0.72
   5 ?  -11.6  14.9         1   1.8e+04      53      64 ..     368     379 ..     338     444 .. 0.58

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 2.7e-07
     APC_u15  14 ELrKgKeeKeaeaketskkeqasnqqstnrtQvvqkhpasRsqsKsllqkqttFpqssKdipdrgaat 81 
                  + K+ eeK+++ k  +  + +s+ + +n+  ++q + +s+ ++ +l  k+tt ++ssK+ ++r  at
  KHJ32554.1 109 SIMKD-EEKQIDLKRANDSSVISISKDSNKINAIQGDKISKLNASPLSLKNTTLSNSSKGASQRNPAT 175
                 55555.56******************************************************998886 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.33
     APC_u15  33 eqasnqqstnrtQ 45 
                  ++++ +s n++Q
  KHJ32554.1 209 PENTPAHSKNHNQ 221
                 2222222222222 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.32
     APC_u15  55 sqsKsllqkqttFpqss 71 
                 s sK+     +tF+q+s
  KHJ32554.1 254 SSSKTANAVSSTFSQPS 270
                 45677777788888887 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.064
     APC_u15  24 aeaketskkeqasnqqstnrtQvvqkhpasRsq...sKsllqkqttFpqss 71 
                  ++ ++ + + asn     + Qv + h+ sR+    sK     q+t pqs+
  KHJ32554.1 280 QSISSQRRMSIASNISLMPKYQVKKNHSDSRTHldsSK-KTLTQSTLPQSA 329
                 556666677777888888999*********98622234.334689999997 PP

  == domain 5  score: -11.6 bits;  conditional E-value: 1
     APC_u15  53 sRsqsKsllqkq 64 
                  ++ sK+  +k 
  KHJ32554.1 368 TKNASKTTSHKS 379
                 333333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (616 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1796  (0.100173); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.94u 0.26s 00:00:01.20 Elapsed: 00:00:00.43
# Mc/sec: 4281.63
//
Query:       KHJ32555.1  [L=229]
Description: putative proteasome a-type and b-type [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-50  168.8   0.1    1.1e-49  168.5   0.1    1.1  1  Proteasome  Proteasome subunit


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.5   0.1   6.1e-54   1.1e-49       1     189 [.      26     207 ..      26     208 .. 0.97

  Alignments for each domain:
  == domain 1  score: 168.5 bits;  conditional E-value: 6.1e-54
                 HHHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHC CS
  Proteasome   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrs 99 
                 v+ Gt+++++ +kdgv+l+ad+r+t+g++++++ t +K+ +i+d+i+++ +G+aaD++++++++ +++ ly +++grp++++     +aa + ++++++
  KHJ32555.1  26 VNLGTSIMAVNFKDGVILGADSRTTTGAYIANRVT-DKLTQIHDTIWCCRSGSAADTQAVADIVHYNLGLYGIKNGRPPTTQ-----TAAAIFQEICYQ 118
                 689***************************88886.**********************************************.....9999999***** PP

                 TTTTTSEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEE CS
  Proteasome 100 grrpfgvslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeavelavkalkealerdklsgknievav 189
                 +++ + ++l+iag+de+ g ++y+i   Gs++++ +++  Gsgs++++++++k++ke ++++eav+++++al+ea++ d +sg+ i+++v
  KHJ32555.1 119 NKNRLKAGLIIAGWDERHGGQVYSIPLGGSLHKQ-SYAIGGSGSTFIYGYCDKHWKEGMNEDEAVDFVKNALQEAIKWDGSSGGVIRMVV 207
                 *********************************9.588888*********************************************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1685.54
//
Query:       KHJ32556.1  [L=751]
Description: hypothetical protein EV44_g6406 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (751 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       727  (0.0405488); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.46
# Mc/sec: 4948.59
//
Query:       KHJ32557.1  [L=519]
Description: putative wd repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.1e-57  188.1  35.0    2.3e-11   44.0   0.3    9.1  8  WD40           WD domain, G-beta repeat
    2.5e-18   66.2   4.8      2e-05   24.8   0.3    5.8  5  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    5.2e-10   39.5   0.2     0.0012   18.8   0.0    3.3  3  eIF2A          Eukaryotic translation initiation factor eIF2A
    7.4e-06   24.9   6.0        1.3    7.5   0.1    4.8  4  Nup160         Nucleoporin Nup120/160
    0.00027   20.0   0.2        5.7    5.8   0.0    4.2  3  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping
    0.00039   20.9   0.1    0.00075   20.0   0.1    1.4  1  NLE            NLE (NUC135) domain
     0.0035   17.7   0.1      0.031   14.7   0.0    2.5  2  DUF4550        Domain of unknown function (DUF4550)
     0.0042   16.5   0.0        3.6    6.8   0.0    3.4  4  WD40_like      WD40-like domain
  ------ inclusion threshold ------
       0.15   12.3   0.0        6.4    7.0   0.0    2.7  3  FAD_binding_9  Siderophore-interacting FAD-binding domain
       0.81    9.7   6.6         27    4.8   0.0    4.7  5  PD40           WD40-like Beta Propeller Repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   4.1e-06    0.0073       3      38 .]     141     178 ..     139     178 .. 0.82
   2 !   44.0   0.3   1.3e-14   2.3e-11       1      38 []     182     220 ..     182     220 .. 0.96
   3 !   23.1   0.1   5.3e-08   9.5e-05       6      38 .]     230     269 ..     225     269 .. 0.89
   4 !   24.3   1.1   2.3e-08     4e-05       6      38 .]     278     310 ..     272     310 .. 0.90
   5 ?    4.2   2.6     0.048        86      24      38 .]     370     391 ..     314     391 .. 0.55
   6 !   27.0   0.1   3.1e-09   5.5e-06       3      38 .]     398     434 ..     396     434 .. 0.89
   7 !   38.0   0.0     1e-12   1.8e-09       2      38 .]     439     476 ..     438     476 .. 0.95
   8 !   27.5   0.2   2.2e-09   3.9e-06       6      38 .]     485     518 ..     479     518 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 4.1e-06
                 EEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 
                 c+  + GH   + + +fsp +++ ++sGs D+t riWd
  KHJ32557.1 141 CTSAILGHgEAILATQFSPASSYrMLSGSGDNTARIWD 178
                 5555569*666999999******8679*88*******9 PP

  == domain 2  score: 44.0 bits;  conditional E-value: 1.3e-14
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g++l+tl+GH s+v ++++spd a +a+Gs+D+tvriWd
  KHJ32557.1 182 GTPLHTLKGHtSWVLAVSWSPDEARVATGSMDNTVRIWD 220
                 579*******888*************************9 PP

  == domain 3  score: 23.1 bits;  conditional E-value: 5.3e-08
                 EEESS.SSEEEEEEETTSSE......EEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgaw......lasGsdDgtvriWd 38 
                 + +GH +++tsl++ p+++       +as+s+D tvr+W+
  KHJ32557.1 230 VMKGHsKWITSLSWEPYHSQilgkprIASASKDATVRVWS 269
                 579**999****99999999988888899**********5 PP

  == domain 4  score: 24.3 bits;  conditional E-value: 2.3e-08
                 EEESS.SSEEEEEEETTSSE.....EEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgaw.....lasGsdDgtvriWd 38 
                 +l+GH +sv+++      +w     + +Gs D+tv++W+
  KHJ32557.1 278 VLSGHkGSVSCV------KWggvgyIYTGSHDKTVKVWN 310
                 689**878****......99999999***99*******8 PP

  == domain 5  score: 4.2 bits;  conditional E-value: 0.048
                 E.......EEEEETTSEEEEEE CS
        WD40  24 w.......lasGsdDgtvriWd 38 
                 +       l+s+sdD t ++Wd
  KHJ32557.1 370 FngevierLVSASDDFTMYLWD 391
                 04444566789999*******9 PP

  == domain 6  score: 27.0 bits;  conditional E-value: 3.1e-09
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++   GH + v+++ fspdg ++as++ D++ ++W+
  KHJ32557.1 398 PITRMVGHqKQVNHVTFSPDGLLIASSGFDNHTKLWN 434
                 556667**999**************9888*******8 PP

  == domain 7  score: 38.0 bits;  conditional E-value: 1e-12
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + + tl+GH  +v+ +afspd+++l++Gs+D t+++Wd
  KHJ32557.1 439 KFINTLRGHvAPVYQCAFSPDSRLLVTGSKDTTLKVWD 476
                 67889****999*************************9 PP

  == domain 8  score: 27.5 bits;  conditional E-value: 2.2e-09
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  l GH + v+++++spdg+ + sG++D+ vriW+
  KHJ32557.1 485 DLPGHqDEVYAVDWSPDGKKVGSGGKDKAVRIWS 518
                 578**666************87999********5 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.087   1.6e+02      53      79 ..     165     191 ..     130     195 .. 0.81
   2 !   24.8   0.3   1.1e-08     2e-05      26      90 ..     173     244 ..     171     245 .. 0.90
   3 !   10.6   0.1   0.00031      0.56      10      81 ..     256     325 ..     254     335 .. 0.77
   4 !   12.0   0.0   0.00011      0.19      36      77 ..     404     445 ..     389     451 .. 0.89
   5 !   13.3   0.0   4.3e-05     0.078      40      90 ..     450     499 ..     445     501 .. 0.92

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.087
  ANAPC4_WD40  53 Lavaysdgevrlldaesgkvvhslsvk 79 
                  +  +  d++ r+ d  +g+ +h+l+ +
   KHJ32557.1 165 MLSGSGDNTARIWDCDTGTPLHTLKGH 191
                  678999****************99866 PP

  == domain 2  score: 24.8 bits;  conditional E-value: 1.1e-08
  ANAPC4_WD40  26 gqrvwtl.......eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                    r+w+        + +++ s v +++W+pd+   a +  d++vr+ d +sgk v ++  +++k +t+l+W+
   KHJ32557.1 173 TARIWDCdtgtplhTLKGHTSWVLAVSWSPDEARVATGSMDNTVRIWDPKSGKQVGNVMKGHSKWITSLSWE 244
                  5678887777777767889999***************************************999*******6 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00031
  ANAPC4_WD40  10 iAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  iA a++d  ++v  +n q +  +  ++++++v++++W   g  +  + +d +v++ ++++g++  +ls +++
   KHJ32557.1 256 IASASKDATVRVWSVNQQTIDFV-LSGHKGSVSCVKWGGVGY-IYTGSHDKTVKVWNSSDGTLAYTLSSHAH 325
                  67788888888888888888555.578888999999999886.56788888999999999999888888776 PP

  == domain 4  score: 12.0 bits;  conditional E-value: 0.00011
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsls 77 
                  +++++v+++ ++pdg l+a +  d++ +l +  +gk +++l+
   KHJ32557.1 404 GHQKQVNHVTFSPDGLLIASSGFDNHTKLWNGRDGKFINTLR 445
                  6799*********************************99876 PP

  == domain 5  score: 13.3 bits;  conditional E-value: 4.3e-05
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                   v + a++pd +lL+ + +d+++++ d+ + k+   l+ ++++ v  ++W+
   KHJ32557.1 450 PVYQCAFSPDSRLLVTGSKDTTLKVWDMRTHKLSADLPGHQDE-VYAVDWS 499
                  577889**********************************996.******7 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   5.3e-06    0.0095      39     181 ..     130     273 ..     117     282 .. 0.80
   2 !   18.8   0.0   6.6e-07    0.0012      99     169 ..     405     474 ..     382     486 .. 0.83
   3 ?    0.3   0.0       0.3   5.4e+02      60      74 ..     491     505 ..     476     518 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 5.3e-06
                 EEEEESSSTT--EEECCEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECS.CEEEEEEEEES--..EEEE-TTSSEEEEE-TTSSS-EEEEEETT. CS
       eIF2A  39 telyliklkkkksevvelkkegpihdvaWspkskefaviyGkmpakvslfdlk.vkviskleeqkrN..tiffspkgklvllaGfgnlaGeleiwdvk. 133
                 ++++ +++ +  ++ + l +   i +++ sp s  + ++ G  ++++ ++d + + ++++l+ +     ++ +sp +  v+++ + n+   + iwd k 
  KHJ32557.1 130 QTIFKVQAVSRCTSAI-LGHGEAILATQFSPAS-SYRMLSGSGDNTARIWDCDtGTPLHTLKGHTSWvlAVSWSPDEARVATGSMDNT---VRIWDPKs 223
                 5566665555555544.4444459999999976.57899************965999999998876522789*************999...*****994 PP

                 ..TTEEEEEEE-TT--EEEE-TTSSEEEEEE-TTT-SSS-EEEEEETTTE CS
       eIF2A 134 ..kkkkiakaeaanatlvewspdgryvlTattaprlrvdngfkiwsysGk 181
                   ++ ++ k ++++ t++ w+p  + +l      +   d ++++ws++ +
  KHJ32557.1 224 gkQVGNVMKGHSKWITSLSWEPYHSQILGKPRIASASKDATVRVWSVNQQ 273
                 444555666788999**************99999999********99865 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 6.6e-07
                 EEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT-..-EEEE-TTSSEEEEEE-TTT-SS CS
       eIF2A  99 eeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaana..tlvewspdgryvlTattaprlrv 169
                 ++++ N + fsp g l++ +Gf n     ++w+  + k i++++   a   ++ +spd+r+++T +    l+v
  KHJ32557.1 405 HQKQVNHVTFSPDGLLIASSGFDNH---TKLWNGRDGKFINTLRGHVApvYQCAFSPDSRLLVTGSKDTTLKV 474
                 47889*******************8...89************98777622579***********987655554 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.3
                 S.EEEEEE-TTSS-E CS
       eIF2A  60 gpihdvaWspkskef 74 
                  ++++v Wsp++k+ 
  KHJ32557.1 491 DEVYAVDWSPDGKKV 505
                 458888888888874 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.4   0.1    0.0065        12     228     253 ..     198     227 ..     147     232 .. 0.68
   2 !    4.2   0.1    0.0075        13     222     250 ..     246     273 ..     228     276 .. 0.77
   3 !    7.5   0.1   0.00075       1.3     223     257 ..     286     321 ..     283     398 .. 0.84
   4 !    7.2   0.0   0.00093       1.7     182     252 ..     409     482 ..     399     495 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0065
                 .....TTTEEEEEETT-EEEEEETTTTEEE CS
      Nup160 228 i....gqtylfalsrdgkLrvWnlltgkcl 253
                 +    +++ +++ s d+++r+W+ ++gk++
  KHJ32557.1 198 VswspDEARVATGSMDNTVRIWDPKSGKQV 227
                 023346777888899999999998888776 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0075
                 ET.....TTTEEEEEETT-EEEEEETTTT CS
      Nup160 222 avavveigqtylfalsrdgkLrvWnlltg 250
                 + + +  g+  ++++s d ++rvW+++ +
  KHJ32557.1 246 YHSQIL-GKPRIASASKDATVRVWSVNQQ 273
                 444444.88889**************876 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.00075
                 T......TTTEEEEEETT-EEEEEETTTTEEEEEEE CS
      Nup160 223 vavvei.gqtylfalsrdgkLrvWnlltgkclatid 257
                 v++v+  g  y+++ s d++++vWn ++g++++t +
  KHJ32557.1 286 VSCVKWgGVGYIYTGSHDKTVKVWNSSDGTLAYTLS 321
                 56777778889********************99955 PP

  == domain 4  score: 7.2 bits;  conditional E-value: 0.00093
                 EEEEEE-------B--TTTT.TSS--SS---TT-ECEEEEET..........TTTEEEEEETT-EEEEEETTTTEE CS
      Nup160 182 wkesvfepksfllslsgllglladpsrrksgasvalsldvavavvei.....gqtylfalsrdgkLrvWnlltgkc 252
                 + + +f+p++ l  +sg+ + +++ ++++ g     +l+  va v       ++ +l++ s d +L+vW+ +t k+
  KHJ32557.1 409 VNHVTFSPDGLLIASSGFDN-HTKLWNGRDGKF-INTLRGHVAPVYQcafspDSRLLVTGSKDTTLKVWDMRTHKL 482
                 55666666666666666666.666666666654.22222222212113455799*******************986 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.3   0.0    0.0092        16     186     215 ..     190     220 ..     172     277 .. 0.87
   2 !    4.3   0.0     0.009        16     185     214 ..     404     433 ..     378     437 .. 0.82
   3 !    5.8   0.0    0.0032       5.7     188     221 ..     449     482 ..     436     508 .. 0.72

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0092
    Ge1_WD40 186 ehs.liveaafspdGtalatasedGevkffq 215
                  h+  +   ++spd + +at s+d +v+ + 
  KHJ32557.1 190 GHTsWVLAVSWSPDEARVATGSMDNTVRIWD 220
                 55437889999****************9985 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.009
    Ge1_WD40 185 eehsliveaafspdGtalatasedGevkff 214
                  ++ ++ + +fspdG  +a +  d   k++
  KHJ32557.1 404 GHQKQVNHVTFSPDGLLIASSGFDNHTKLW 433
                 34458999****************999988 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0032
    Ge1_WD40 188 sliveaafspdGtalatasedGevkffqvylede 221
                 + + + afspd   l t s+d ++k + +  ++ 
  KHJ32557.1 449 APVYQCAFSPDSRLLVTGSKDTTLKVWDMRTHKL 482
                 468999*********************9988865 PP

>> NLE  NLE (NUC135) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.1   4.2e-07   0.00075       2      52 ..      37      87 ..      36      91 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 4.2e-07
         NLE  2 qvrFvtkded.eslavpgtplsvPa.sltrkqLselvnkLlk.ee.kpvpFdFli 52
                +++F+++  +  ++   g+p +vP+ + ++k+L+ lvn+L k +  + +p+ F i
  KHJ32557.1 37 RIQFFDET-TgLPI---GGPTQVPViDANPKNLELLVNSLQKnDPsEYIPYRFNI 87
                79*****6.44777...*******747***************522577***9976 PP

>> DUF4550  Domain of unknown function (DUF4550)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.7e-05     0.031      17      90 ..     284     362 ..     271     367 .. 0.78
   2 ?   -0.9   0.0       1.3   2.3e+03      68      82 ..     465     479 ..     456     484 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.7e-05
     DUF4550  17 kkvDvvvfgsvAkvfleseskvvkpweeddklwisw..thti...einvtkellkkllehkiklklwdtkdkvsskarf 90 
                  +v  v +g v+ +++ s+ k+vk+w++ d +  +   +h++   ++++++++++ +  h  + k  d+++   ++a+ 
  KHJ32557.1 284 GSVSCVKWGGVGYIYTGSHDKTVKVWNSSDGTLAYTlsSHAHwinHLALSSDFINRTAFHDHTGKALDSNEAKLARAKE 362
                 5677899********************77766554311455522346799*******************9998888875 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.3
     DUF4550  68 llehkiklklwdtkd 82 
                 + ++  +lk+wd++ 
  KHJ32557.1 465 TGSKDTTLKVWDMRT 479
                 55677899****985 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.43   7.7e+02       7      45 ..     156     195 ..     150     229 .. 0.66
   2 ?   -2.2   0.0       1.1     2e+03      26      49 ..     267     290 ..     255     337 .. 0.54
   3 !    5.1   0.0    0.0067        12       2      33 ..     450     481 ..     449     486 .. 0.92
   4 !    6.8   0.0     0.002       3.6       2      27 ..     492     517 ..     491     519 .] 0.93

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.43
   WD40_like   7 diskkgsl.ilyGgkddkctvlkleslesvsivesfedSv 45 
                 ++s+ +s+ +l G+ d+++++ + ++++    +++ +  v
  KHJ32557.1 156 QFSPASSYrMLSGSGDNTARIWDCDTGTPLHTLKGHTSWV 195
                 5666666645668888888888888887776666555444 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.1
   WD40_like  26 vlkleslesvsivesfedSvifvk 49 
                 v +++++++  ++ + + Sv  vk
  KHJ32557.1 267 VWSVNQQTIDFVLSGHKGSVSCVK 290
                 555555555444444444444443 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.0067
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlklesle 33 
                 ++Y   +s+++ l++ G+kd +++v ++++++
  KHJ32557.1 450 PVYQCAFSPDSRLLVTGSKDTTLKVWDMRTHK 481
                 79*************************99876 PP

  == domain 4  score: 6.8 bits;  conditional E-value: 0.002
   WD40_like   2 eiYsidiskkgslilyGgkddkctvl 27 
                 e+Y++d s++g+ +  Ggkd+ +++ 
  KHJ32557.1 492 EVYAVDWSPDGKKVGSGGKDKAVRIW 517
                 9********************99986 PP

>> FAD_binding_9  Siderophore-interacting FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.12   2.1e+02      71      99 ..     260     286 ..     200     293 .. 0.61
   2 ?   -3.8   0.0       8.1   1.4e+04      13      31 ..     366     384 ..     365     390 .. 0.79
   3 ?    7.0   0.0    0.0036       6.4      15     104 ..     412     500 ..     399     507 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.12
  FAD_binding_9  71 mRtYtvraldaeaeeldidfvlHgdegpa 99 
                     ++ tvr +  ++++  idfvl g++g +
     KHJ32557.1 260 SKDATVRVWSVNQQT--IDFVLSGHKGSV 286
                    556788888887775..666665555543 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 8.1
  FAD_binding_9  13 rrvtltgeelagfksdgtD 31 
                      vt++ge ++++ s + D
     KHJ32557.1 366 KAVTFNGEVIERLVSASDD 384
                    5799999999999887766 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0036
  FAD_binding_9  15 vtltgeelagfksdgtDqhikLllpepgqtepelppelteeglqeweelpederpvm...RtYtvraldaeaeeldidfvlHgdegpaarwAa 104
                    vt++ ++l  ++s g D+h kL    +g+ + +l  ++++   q  ++++ d+r ++   ++ t++ +d  +++l  d+  H+de  a +w  
     KHJ32557.1 412 VTFSPDGLL-IASSGFDNHTKLWNGRDGKFINTLRGHVAPVY-Q--CAFSPDSRLLVtgsKDTTLKVWDMRTHKLSADLPGHQDEVYAVDWSP 500
                    566555554.45578899999998888888887766666655.3..34666666654233899****************************75 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.4       1.2   2.1e+03      15      19 ..     199     203 ..     197     203 .. 0.87
   2 ?   -2.2   0.1       2.4   4.4e+03      17      26 ..     311     319 ..     311     321 .. 0.82
   3 ?    3.4   0.0     0.043        77      15      24 ..     413     422 ..     411     424 .. 0.86
   4 ?    0.5   0.0      0.36   6.4e+02      15      24 ..     455     464 ..     454     464 .. 0.86
   5 ?    4.8   0.0     0.015        27      16      22 ..     498     504 ..     494     505 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.2
                 EE-TT CS
        PD40  15 sfSPD 19 
                 s+SPD
  KHJ32557.1 199 SWSPD 203
                 9***9 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 2.4
                 -TTSSEEEEE CS
        PD40  17 SPDGkrlaFs 26 
                 S DG +la++
  KHJ32557.1 311 SSDG-TLAYT 319
                 89**.88887 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.043
                 EE-TTSSEEE CS
        PD40  15 sfSPDGkrla 24 
                 +fSPDG  +a
  KHJ32557.1 413 TFSPDGLLIA 422
                 8*****7775 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.36
                 EE-TTSSEEE CS
        PD40  15 sfSPDGkrla 24 
                 +fSPD + l+
  KHJ32557.1 455 AFSPDSRLLV 464
                 7****99875 PP

  == domain 5  score: 4.8 bits;  conditional E-value: 0.015
                 E-TTSSE CS
        PD40  16 fSPDGkr 22 
                 +SPDGk+
  KHJ32557.1 498 WSPDGKK 504
                 *****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (519 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.60u 0.30s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 3528.97
//
Query:       KHJ32558.1  [L=472]
Description: putative cyclin-dependent protein kinase complex component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-42  144.7  14.8    5.7e-25   88.5   0.6    3.4  3  Cyclin    Cyclin
  ------ inclusion threshold ------
       0.26   11.7   1.6       0.38   11.2   0.2    2.0  2  DUF702    Domain of unknown function (DUF702)


Domain annotation for each model (and alignments):
>> Cyclin  Cyclin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.6   1.6    0.0086        77      24      77 ..     116     175 ..     103     185 .. 0.51
   2 !   60.6   0.5   2.5e-20   2.2e-16       2      98 ..     208     296 ..     207     312 .. 0.83
   3 !   88.5   0.6   6.4e-29   5.7e-25      89     161 .]     358     427 ..     355     427 .. 0.94

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.0086
                 ----------T.........................T--SS-...-SS-HHHHHHHHHHHT CS
      Cyclin  24 asadsksnlensqkqss...shtkttfaq.tpkessFatkav...paisigsylsrlqkfg 77 
                 +sa s++n+++  k+ +   s+t+ t++       sF    v   ++i ++s l+ +qkf+
  KHJ32558.1 116 QSARSPQNSSQDLKKRKssySSTNSTYSAsLRSSASFCDVKVssvDKIKVQS-LAHIQKFA 175
                 4444444444433322211255554444303344456544443336777654.78899997 PP

  == domain 2  score: 60.6 bits;  conditional E-value: 2.5e-20
                 HHHHHHHHHHHHHHHHHH--------------T.....................T--SS--SS-HHHHHHHHHHHTT--HHHHHHHHHHHHHHHH.. CS
      Cyclin   2 kliqqlsllldrlvanndetatasadsksnlensqkqssshtkttfaqtpkessFatkavpaisigsylsrlqkfgesaplvllgtliYldrivkrc 98 
                 ++i+++++ll ++v++nd +  + ++ ++ +               ++t+k+s+F++k+vp+isi sylsr++k+++++  v+l++liY+dr++++ 
  KHJ32558.1 208 DVIEMVAGLLTKIVTTNDRQHSTRSKLPQSSDS--------YSYISDNTSKISAFHGKNVPNISILSYLSRIHKYCPTTYEVFLSLLIYFDRMTEKF 296
                 578899999999999998877666666655555........4455567899*****************************************99854 PP

  == domain 3  score: 88.5 bits;  conditional E-value: 6.4e-29
                 HHHHHHHH..H-TT---STTTHHHHHHHHHHHHHHHH-SS---HHHHHHHHTS-HHHHHHHHHHHHHHTTT-- CS
      Cyclin  89 iYldrivkrcvsealvvtsanihRllivallvatKflvDlsysnekfakvggislkELnkLEidFlflvdFdl 161
                 iY + i+    s+ +vv+s+nihRl+i+a++ a+Kf++D++y+n+++akvgg++l ELn+LE++Fl+l+dF+l
  KHJ32558.1 358 IYSHEITS---SRLFVVDSYNIHRLVIAAVTCASKFFSDIFYTNSRYAKVGGLPLLELNHLELQFLLLNDFRL 427
                 67777777...99**********************************************************86 PP

>> DUF702  Domain of unknown function (DUF702)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   4.3e-05      0.38      74     129 ..     117     171 ..      90     188 .. 0.59
   2 ?   -2.2   0.1      0.59   5.3e+03      73     108 ..     333     366 ..     298     373 .. 0.39

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4.3e-05
      DUF702  74 askrpreekaaaasatslsatttksesfpaevsseavFrcvrvssvdd.aedevaYq 129
                 +++ p++  +++  +  +s+ ++++++++a ++s+a F  v+vssvd+ + + +a  
  KHJ32558.1 117 SARSPQN--SSQDLKKRKSSYSSTNSTYSASLRSSASFCDVKVSSVDKiKVQSLAHI 171
                 2222222..2222222222334455699*******************9444556655 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.59
      DUF702  73 easkrpreekaaaasatslsatttksesfpaevsse 108
                  +sk ++   + ++s+  ++++  +++ +++e++s+
  KHJ32558.1 333 ISSKDHKD--TYNNSRDVQNTSDDSNNIYSHEITSS 366
                 22222221..11111111112222233555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (472 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       777  (0.0433376); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3396.78
//
Query:       KHJ32559.1  [L=213]
Description: hypothetical protein EV44_g4019 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       310  (0.0172904); expected 358.6 (0.02)
Passed bias filter:                      246  (0.0137208); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1663.22
//
Query:       KHJ32560.1  [L=273]
Description: putative btb poz domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-06   27.4   0.2    4.3e-05   23.7   0.0    2.3  2  BTB       BTB/POZ domain


Domain annotation for each model (and alignments):
>> BTB  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.0   2.4e-09   4.3e-05      13      78 ..      64     127 ..      49     163 .. 0.82
   2 ?    1.4   0.1     0.021   3.7e+02      67     106 ..     183     219 ..     178     222 .. 0.80

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 2.4e-09
                 EEEEETT.TEEEEE-HHHHHHH-HHHHHHHTSTTTTTCCCEEEEETTSGHHHHHHHHHHHHHSEEEC CS
         BTB  13 vtlvvgd.gkefkahkavLaarSpyFkalftskeieessvseielddvepeafealLefiYtgelei 78 
                 v+l+vg  +k f  h+  L a  + F + f  k +++++  +i+++  +p++++ +++fiYt +++ 
  KHJ32560.1  64 VQLLVGAdKKLFTIHRDLLLATGDAFVKAFDPK-KNTKG--RITMSSKNPDVLKLFIDFIYTRHVPG 127
                 56777776899**********************.55555..8********************99864 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.021
                 HHHHHHHSEEEC-CGGGHHHHHHHHHHHT-HHHHHHHHHH CS
         BTB  67 lLefiYtgeleitseenleelLaaadllqiprlkkaceef 106
                 l+  iY+ +  +   ++l ++ aa  ++q+++lk ++e +
  KHJ32560.1 183 LILSIYRNTSIM---SQLRKFVAACLIYQVRSLKIEIEAI 219
                 555688887666...589999************9988865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.19s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 2163.99
//
Query:       KHJ32561.1  [L=166]
Description: hypothetical protein EV44_g4324 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.4e-20   71.7   0.1    5.3e-20   71.4   0.1    1.1  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase
     0.0015   18.1   0.0      0.003   17.1   0.0    1.5  1  Exo_endo_phos    Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.4   0.1   5.9e-24   5.3e-20       1     118 [.      24     146 ..      24     147 .. 0.85

  Alignments for each domain:
  == domain 1  score: 71.4 bits;  conditional E-value: 5.9e-24
  Exo_endo_phos_2   1 lliisvYippsd....elenlestlekllselkspkiiilGDfNakhplWgsedtds...sargeeLiefleehslsllnllksgptfkssngs 87 
                      ++i ++Y+pp      +  ++++ l ++ls+ +  ++i++GDfN++hp Wg+  +++   +  +e+Lie+l  ++++ l l++ + t+++++++
       KHJ32561.1  24 VYITNLYNPPPLshrsKELKTLKYLPEILSKEG--HHILVGDFNLHHPRWGG--QRVvshHTLAEDLIEILAHKDME-LVLPEGTITWSNRGSQ 112
                      5899******99866656666677777777777..9****************..44456999***************.444455699999999* PP

  Exo_endo_phos_2  88 stiDltltsdnlals...kleleeedlgSDHrpi 118
                      st+Dl++  ++l +s   ++   e + +SDH pi
       KHJ32561.1 113 STLDLIFIFKELEDSvtrCELAKELEASSDHIPI 146
                      ***********999999777788899******98 PP

>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   3.4e-07     0.003     142     233 .]      53     143 ..      25     143 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 3.4e-07
                    HTTSEEEEEEE-SSSTSGGGBSCGHHHHHHCTTTHH..........SSCESCETTTTTTTTTTTEB-BEEEEEECHHHCCEEEEEEECCHHEECTS CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 142 drgapvivaGDfNarpsdddsrvlrtrglalapapv..........glyllgggptptyvtraggsrlDrilaspalalfrsgvlppplalvrrea 227
                     + ++ i++GDfN ++  ++ ++  ++  +                +  l  ++ t t+ +r+ +s+lD i+  ++l+  ++   + ++       
     KHJ32561.1  53 SKEGHHILVGDFNLHHPRWGGQRVVSHHTL-----AedlieilahkDMELVLPEGTITWSNRGSQSTLDLIFIFKELEDSVTRCELAKE------L 137
                    567789********9999999994444444.....144455788999999999******************999854444443333333......5 PP

                    SCSSSB CS
                    xxxxxx RF
  Exo_endo_phos 228 ltlSDH 233
                    + +SDH
     KHJ32561.1 138 EASSDH 143
                    566888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1290.15
//
Query:       KHJ32562.1  [L=508]
Description: hypothetical protein EV44_g5399 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-70  238.2   0.7    1.6e-70  237.7   0.7    1.1  1  Atg14     Vacuolar sorting 38 and autophagy-related subunit 1
     0.0029   16.7   3.3     0.0047   16.1   3.3    1.3  1  AIP3      Actin interacting protein 3


Domain annotation for each model (and alignments):
>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.7   0.7   1.8e-74   1.6e-70       1     317 [.       3     346 ..       3     349 .. 0.96

  Alignments for each domain:
  == domain 1  score: 237.7 bits;  conditional E-value: 1.8e-74
       Atg14   1 CplCerss...rpfiCesClrngperlyelrerlaklksekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqelkdklsqlkke 96 
                 C++C r +    p++C++++rn    ly  r+++a +++ek++l ++++ al+++e ++q       +  +l  +k+++ ++ +r++++ +k ++l+++
  KHJ32562.1   3 CDICLRMGgqkLPLLCPTDARN---FLYGPRIEHATVLIEKDALDQQVTSALSKREIKTQIM--SAVTPLDLIAIKAETDQILDRTKLILAKAEELRDK 96 
                 ******88888***********...*******************************443333..33456788899************************ PP

       Atg14  97 ieekkkklaklsdklkkRrsdleslqneleerrkkqiaklqdaikrieqklsslssktlesrsslcselaklyglrrtsyergkwvfskngeseesytI 195
                 +e+++  l ++++ +++R+sdl s++  + +rr++  + + ++i++i+ k+++ + +++++rs+lcse+a+lygl++           k+++++ +y+I
  KHJ32562.1  97 VEQARLDLLRRKAVISRRKSDLVSASCGIDARRNRTAKDVERSIQTIKAKWHQKHVSIMSARSFLCSEAARLYGLKK----------VKSKNLKDEYKI 185
                 *****************************************************************************..........45667******* PP

       Atg14 196 ggiplpdlrdlnafpaeeIsasLsyiaqLlaLvshyLsirLPaeltlphscqpi.........................................rplf 253
                 g + ++dl +l+ ++a ++s+ Ls+ia+Ll L +hyL+++LPae+tlph+++p+                                         rpl+
  KHJ32562.1 186 GRSLVVDLDKLHTVSAAQVSTVLSHIAHLLILTVHYLGLQLPAEITLPHRDYPLptifplqtsykfsdvlfpghtlpqtthttsqsvkkaqvcrpRPLY 284
                 *************************************************************************************************** PP

       Atg14 254 iekslpkls...peteseflegvalLayniawLcrtqgvnsleleptqldtlenlcdllklLysllv 317
                 i k+lp+++   ++ +  flegvalLayn+ w+c +qg+ +      ++++++++c+++++L +ll+
  KHJ32562.1 285 ILKPLPTIAiedSMEYTLFLEGVALLAYNVTWVCKSQGIAI-----GEEENFQDICKIGRNLFNLLI 346
                 *****************************************.....4569************99887 PP

>> AIP3  Actin interacting protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   3.3   5.2e-07    0.0047     183     263 ..      66     149 ..      40     165 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 5.2e-07
                 XXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXHHHHHHHHHHH..HH.HHHHHHHHHHHHHHHHHHHHH CS
        AIP3 183 ssnrayiekgkkkLseesdklvtkvddLqDlvedlrkDVvqRgvrpskkqlesvakei..kk.akkelkkleeyiktekpvWkk 263
                   +   i++  +++ ++++ +++k ++L D ve+ r D ++R++ +s+++ + v+     ++  + + k++e+ i+t k  W +
  KHJ32562.1  66 PLDLIAIKAETDQILDRTKLILAKAEELRDKVEQARLDLLRRKAVISRRKSDLVSASCgiDArRNRTAKDVERSIQTIKAKWHQ 149
                 555567888899999****************************99999888877776422441445678899999999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3486.49
//
Query:       KHJ32563.1  [L=558]
Description: putative lmbr1 domain containing protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-14   52.4  31.5    8.2e-14   51.4  25.0    2.7  2  LMBR1     LMBR1-like membrane protein


Domain annotation for each model (and alignments):
>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.4  25.0   4.6e-18   8.2e-14       8     465 ..      15     438 ..      10     450 .. 0.71
   2 ?   -1.8   0.4     0.059   1.1e+03     132     145 ..     515     528 ..     494     546 .. 0.55

  Alignments for each domain:
  == domain 1  score: 51.4 bits;  conditional E-value: 4.6e-18
       LMBR1   8 llflllfllallllrrykrkkdqeavvkllvllalalsflivlllPlDiastiyrq......nealypcsyylqwlsesl.ikvlWrivYwlsnlllwi 99 
                 + ++l++l a+ + + y++ +d++a+v +++ ++l   ++++lllP+D+a  + ++          ++   + +  +  + +k+l+ i+Y ++ +   +
  KHJ32563.1  15 ITIILMALAAITFTFTYQSNHDRSALVSVITIISLTSLLATLLLLPVDVALISSTNssrlgiK---EKWATPEKIQDIVIgLKTLYIILYSFNAFVFLL 110
                 568888999999**************************************9333334444431...33333333333344799**************** PP

       LMBR1 100 ilPfaqfYvesggftgkgkl.....krslyenaiiyllllvivlglliyvliil...............qklsllsik.sllpilislantwGlvllil 177
                 i+Pf++f++e  +++  + +     +r+   ++ + ++l +++l++++  ++i                + l l +   +  ++   +   +G++l i+
  KHJ32563.1 111 IVPFTYFFYEEYDDNAAEEGyqtpgQRI-LGALKYTFMLSILILIFFFAGFLIPivrdpkgyqfdlnffKRLILEDHGeYAITFSLGMLISIGTILYIF 208
                 ****************999999999999.66666666666666666555555547999********9987777777777888899999999******** PP

       LMBR1 178 llGyGlvelPrslwreiksdldeelkklyfeaaklntekeeaereledllkevkklrksisesdplrkyleeilkkvPeeiaeklksnenkteeslakl 276
                 ++  G++ lP+sl++   s+ + + ++l ++ a+   e  + +r+l++l ++ +++    ++                           ++  e+l+++
  KHJ32563.1 209 FTAAGMAILPLSLIK---SQPSIDASSLHADSASFLRENRQRQRQLQNLSNRTSYI----TD---------------------------ESERERLVNE 273
                 *************99...66664556665555555555555566666444443333....22...........................235679**** PP

       LMBR1 277 ekqlikalqkrertekqwkrllekalelediiknksskekefkssessrrgefakqgklkltptleyywaklllplvllilsiilvllsiiiilseltk 375
                 e+ li++++   r +++ +r + k+              k+++                        +++ l+ +++ll+lsi++++ ++++ + ++  
  KHJ32563.1 274 ERTLIRRINLASRLQARENRTIFKF-------------LKKLR--------------------ASLKPLR-LIGGILLLCLSILIWISILVTGVDKVKN 338
                 *************************.............12222....................2222333.3444444566666665555555554444 PP

       LMBR1 376 lle.......kppls....lfalfievsaessfglfga.......elieillilYlmlcayvglfklkl.pnfyrlap..hhqTdmsslifnaalllrl 453
                 +l        +++++    l+ +++          +++       +++ ++l l+++ ++++g+++l++ ++ ++l    ++qT  + +++  ++l+++
  KHJ32563.1 339 SLCkqecgyiLNTINiyqpLN-YIL----------VKFsriypldNVFMVILTLFFLSSSVAGIIRLGIrFFWIKLLEirKGQTLPQAMLIVNVMLALM 426
                 444445544433333222133.333..........222333333447888888888899**********988888887788999998888888888888 PP

       LMBR1 454 tsPlclnflgli 465
                   +l + ++ + 
  KHJ32563.1 427 ILALNYSVVMMV 438
                 777777666665 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.059
       LMBR1 132 lllvivlglliyvl 145
                  ++++++ ll+++ 
  KHJ32563.1 515 QFVFLIVFLLVFLI 528
                 22222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1144  (0.0638072); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.33s 00:00:01.02 Elapsed: 00:00:00.49
# Mc/sec: 3426.28
//
Query:       KHJ32564.1  [L=187]
Description: hypothetical protein EV44_g5701 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.5e-44  150.0   4.4    9.6e-44  149.8   4.4    1.0  1  DUF3807    Protein of unknown function (DUF3807)
    0.00062   20.1   0.4    0.00071   19.9   0.4    1.1  1  GAGA_bind  GAGA binding protein-like family
  ------ inclusion threshold ------
      0.026   14.5   0.1      0.045   13.7   0.1    1.4  1  DUF386     YhcH/YjgK/YiaL


Domain annotation for each model (and alignments):
>> DUF3807  Protein of unknown function (DUF3807)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.8   4.4   1.6e-47   9.6e-44       1     181 [.      10     186 ..      10     187 .] 0.88

  Alignments for each domain:
  == domain 1  score: 149.8 bits;  conditional E-value: 1.6e-47
     DUF3807   1 DLqaFhakHFseastdhfesqfleeeeeaeeeeydeedDgLGYYpDGvKRTLTDeQIaiFRHSEieallRereleeeesekekke.eeeeeedkeaadk 98 
                 DL  F + HFs  + dhf+ qfl     + ee +d edD LGYY+DG+KRTLTDeQIaiFRHSE+++  R ++l++e+++++ ++ ++++ ++ e +d+
  KHJ32564.1  10 DLDLFYSLHFSPNNIDHFTRQFL-----EPEEAQDPEDDCLGYYEDGTKRTLTDEQIAIFRHSELHRSVRFKQLSTEKQTSNLHAqSKDTISSIEIDDS 103
                 8999*******************.....46677899***************************************999776544404445566677776 PP

     DUF3807  99 essqeseeqekkkkskkkskkkkkrakkakekkekkeekkidlrkrtwdkvdkglasldyddeeeeeqksaekaaqRrrisyd 181
                 ++ ++   +  k ++++   +k ++a kak+k  ++++ k+dlrkrtwdkv+ gl+sldyd+ ++++ ++ +k+a+Rr+i+yd
  KHJ32564.1 104 QTMETIICTPIKVQNERPLTNKARKALKAKQKGYFRQAIKPDLRKRTWDKVELGLESLDYDESQNNSISRGAKSARRRQITYD 186
                 7777778888888888899999999***********************************88888888888***********9 PP

>> GAGA_bind  GAGA binding protein-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.4   1.2e-07   0.00071      87     201 ..      59     167 ..       6     169 .. 0.72

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 1.2e-07
   GAGA_bind  87 kakalleednalaalqmlrplesqlqeaeapelekeevasselveesavvekeeaakkrqqgkrpkepkakkakkaarkpkeegedlalkkakrsksek 185
                 ++ a++ +++  +++++ ++l++++q+++  + ++++++ss  +++s+++e+   +  + q++rp ++ka+ka ka++k   ++   a+k    +k  +
  KHJ32564.1  59 EQIAIFRHSELHRSVRF-KQLSTEKQTSN-LHAQSKDTISSIEIDDSQTMETIICTPIKVQNERPLTNKARKALKAKQKGYFRQ---AIK-PDLRKRTW 151
                 33566666666666666.44666666666.577888899899999999999886666666778999***999999555555544...333.4688999* PP

   GAGA_bind 186 ksvdlvingielDest 201
                 ++v+l+++ +++Des+
  KHJ32564.1 152 DKVELGLESLDYDESQ 167
                 **************96 PP

>> DUF386  YhcH/YjgK/YiaL
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   7.5e-06     0.045      91     132 ..      34      77 ..      18      89 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 7.5e-06
                 GS---BTTTTBEEES--TTEEEEEE-TTEEEEE-TT--EEE..... CS
      DUF386  91 lkeeydeekDiafyaegeeessvtlkpgdfaiffPedaHrp....e 132
                  +e+ d+e+D+  y   e+ ++ tl+++++aif  +++Hr     +
  KHJ32564.1  34 PEEAQDPEDDCLGY--YEDGTKRTLTDEQIAIFRHSELHRSvrfkQ 77 
                 4557899*******..67888899****************986652 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       797  (0.0444531); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1431.11
//
Query:       KHJ32565.1  [L=1433]
Description: putative cpsf a subunit region [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-93  314.1   0.0    1.2e-92  310.7   0.0    2.2  2  CPSF_A    CPSF A subunit region
    2.8e-22   79.0   0.0    1.1e-21   77.1   0.0    1.9  2  MMS1_N    Mono-functional DNA-alkylating methyl methanesulfon


Domain annotation for each model (and alignments):
>> CPSF_A  CPSF A subunit region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.028   2.5e+02     216     255 ..      82     126 ..      29     134 .. 0.61
   2 !  310.7   0.0   1.3e-96   1.2e-92       1     321 [.    1051    1398 ..    1051    1399 .. 0.96

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.028
                 .........EEEEEEEEE-SS----E...EEEE...SSS--S-EEEEEE- CS
      CPSF_A 216 p........rleeraefhlgeivtslrkgslvp..geaesssspqllyat 255
                 +        +l  +ae+ l  +vtsl +++l +           +ll++t
  KHJ32565.1  82 ArsgrvrrtKLVLIAEYPLSGTVTSLARVKLQSskS-----GGDSLLVGT 126
                 145555555666666666666666666666544221.....123355555 PP

  == domain 2  score: 310.7 bits;  conditional E-value: 1.3e-96
                  B-EEEEE-T..TT-EEEEE--TTEEEEEEEE--B-SSTTT---B--EEEEEEE---SSS--E.EEEEEEEEEE-......SS--EEEEEEEEEEE.E CS
      CPSF_A    1 assiklvdpiskeeidsleLeenEavlsvksvelessettkekkellvVGtafnlgedpaarsGrilvfeiiev......petnrkLklvhkeev.k 90  
                  +s+ikl++pi+++ i+++eLe++E++l+vk+++le se t+e+k+l+ VGta+ +ged++++ Gri+v++i         petn++Lk+v+ke++ +
  KHJ32565.1 1051 QSFIKLINPINWSIIQTIELEPCESILCVKTLSLEISEITNERKQLITVGTAVCKGEDLPTK-GRIYVYDIVTAvpepgrPETNKRLKQVAKEDIgR 1146
                  699********************************************************999.*********999********************99 PP

                  S----EEEE..TTEEEEE-SSEEEEEEE-TTS-EEEEEEEE-SS-EEEEEEETT..EEEEEESSS-EEEEEE-SSS--EEEEEEESS---EEEEEEE CS
      CPSF_A   91 gavtalaef..qGrllvgvgqkvrvydlgedktLlrkafldtqlyvvslkvlgn..riivgDlmkSvtfveydeenyklilfardtqkrwvtaaefl 183 
                  gavta++e+  qG++lv++gqk++v++l+ed++Ll++af+d+++yv+ +k+l++  +++++D++k+v+f++y+ee+yk++lf+++ ++ +v+aae+l
  KHJ32565.1 1147 GAVTAVSEIgtQGFMLVSQGQKCMVRGLKEDGSLLPVAFMDMNCYVTCIKELRGtgLCVFSDVIKGVWFAGYTEEPYKMMLFGKSAKNFEVIAAELL 1243
                  ****************************************************7778***************************************** PP

                  --SSS.EEEEEETTSEEEEEE--TTSGGGTTTT.EEEEEEEEE-S.S----E...EEEE..SSS--S.................-EEEEEE-TTS-E CS
      CPSF_A  184 vdged.tvlvaDkfgnlfvlrydpeasessdgdprleeraefhlg.eivtslrkgslvp.geaesss.................spqllyatldGsi 260 
                  +dg++ +++vaD ++nl++l+ydpe+++s +g+  l++ra+f lg +++t+l   +l+p ++a +                   +++++ ++ +G i
  KHJ32565.1 1244 PDGKElYIVVADVNCNLHILEYDPEHPKSIQGH-LLLHRATFSLGgHFPTKL---TLLPrTKAPALNlsnlhtasnstettnaqDYHVITTSSTGCI 1336
                  *********************************.**********63788999...****765665458999************************** PP

                  EEEEE.--HHHHHHHHHHHHHHHHHS--SSS--HHHHS---..----.....---EEHHHHHHHH CS
      CPSF_A  261 gllvPliseeeyrrlqaLqqqLrkelkhlgGldhrafRsyyspksee....vkgviDgdllerfl 321 
                   +l+P +se +yrrl++L ++L+++l h++Gl+++++R  +    ++    ++ v+Dg ll r++
  KHJ32565.1 1337 SVLLP-LSEFQYRRLSTLTTHLANTLSHPLGLNPKMYRIDRDA--PDsmagSRTVVDGTLLSRWM 1398
                  *****.**********************************976..344568************97 PP

>> MMS1_N  Mono-functional DNA-alkylating methyl methanesulfonate N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.11   9.9e+02     311     344 ..      32      67 ..      15      72 .. 0.77
   2 !   77.1   0.0   1.2e-25   1.1e-21       1     475 [.     120     751 ..     120     762 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.11
      MMS1_N 311 asegqdqiytcs..GagkrgsLrelRsGieveelav 344
                 a+ ++ qi+t+   +ag+++s+re+    e+++  +
  KHJ32565.1  32 AKTSHLQIFTIKtiSAGDDSSFREITENCEINDTQI 67 
                 566788999987779999999999998888887665 PP

  == domain 2  score: 77.1 bits;  conditional E-value: 1.2e-25
      MMS1_N   1 DlLvvgsdsgelvflsynpeknqfetvhshe.......tlgksgsrrsqpGqylavDPkgraiavsayekvflvyslkk...............keiln 77 
                 D L+vg+   +l++ +++p++ ++ t+   +         ++    ++ +  yl+ DP +r+ a+    +++ + ++k+               +    
  KHJ32565.1 120 DSLLVGTRDAKLSLAEWDPSRSELSTIS-IHyyeqddlHNSPWAPALKDSVSYLTADPGSRCAALKFGLRSLAILPFKQgdedvhmddwedgldE---- 213
                 89********************999998.4447788776667788999********************************988766666544440.... PP

      MMS1_N  78 r........ealllssplea..........rksegvilsmvFldpgykeednpiialle...........qdrrg...........kteltlyewdlgl 136
                 +        +                      s  +il++ +ld      +   +a+l+           +               k  lt++ ++l l
  KHJ32565.1 214 SrsaeksstK---------TtngnitkeetPYSPSFILQLPSLDSILHT-P-IHLAFLYeyreptfgilaS---TnspsasllferKDILTYMVFTLDL 298
                 1433333221.........122233334556667777777777777743.3.4566666444444444332...0345778888854444444444444 PP

      MMS1_N 137 nlvrkisktsepkk..nldsganlLiplpkp.ggvlVcgetiitykdildqed.irkk.swarPrrekatn..............fvawekldsfffll 216
                 +  ++ s+t  +++   l+     ++plp p gg l +g++ +++ d+ ++ + + ++ + ++  + + ++               +++e+   + ++l
  KHJ32565.1 299 H--QRASTT--ILSvsGLPYDLTQIVPLPAPvGGALLIGSNELIHIDQAGKVNgVAVNmFAKQCNSLNLYDqseleiglegckieQFSIESGE-MIIIL 392
                 4..443332..222334778888*******856666666666666666565554655443333333333337777777777643322445555.999** PP

      MMS1_N 217 atedGdLylleiekdedsgkvvtsislkyf.......dtvsvasalvilksgfLfvasefGdgqlyqieargedd........................ 284
                 ++  G++  l++    d g++v++++++ +       + +  as+ + l+ + Lf++sef d+ ++  + +++++                        
  KHJ32565.1 393 QS--GQIAILNF--HVD-GRSVSGLRIRPVsenaggfLILAQASCTCLLGPNALFIGSEFTDSVVLGWDRKSNQTtrqkhflefsegsddisleddddd 486
                 *9..********..345.47899999999888888888889999999999999*****************99877************************ PP

      MMS1_N 285 ...............................knleliqtldNlaPilDfkvv.kes..........dlasegqdqiytcsGagkrgsLrelRsGievee 341
                                                  + + +t+ N++Pi D++ + + s           ++  gq  ++   G+ + gsL +++  i  e 
  KHJ32565.1 487 vdddlygdgqsviasinngdvsdlennkagdYIFYIDDTMINIGPISDITFAkS-SsqiakipsnnMEHICGQLDMVISIGKERAGSLAIIHENIHPEV 584
                 ******************************65556667999***********62.3467777877677888888889999*************999999 PP

      MMS1_N 342 lavseepgspitgvWtlklssede.....................yddylvlSfvne..Tlvlsid..gdgeveevtedsglllsv.pTLaagnlgdgs 414
                 +  ++ p   ++g+Wt+  ++ ++                     yd ++++S   e  + v  +   g +++e +t  + ++  +  T+ a++lg+g 
  KHJ32565.1 585 IKEIHFP--ETRGIWTINVKKPTDksneisrnkdnlktdfrlqeeYDRLMIISKEPEegSKVSDVYalGSANFEALT-GTEFEPEAgATIEASTLGNGL 680
                 9987555..56******994443335567778888999999999999999999865556666666655778999999.8899998747********987 PP

      MMS1_N 415 .lvQVtpngirliradk....rvsewkppngk..siiaaaangeqllvalsgrelvyfeld...lieevek 475
                  ++QV ++ +r +++d     ++  ++ ++g   +i +a++ +  ll++ +  ++++ + d   ++ee+ek
  KHJ32565.1 681 rIIQVLKSEVRSYDGDLglaqIIPMYDDDTGAepKILSASFADPFLLLVRDDFSIYVAQCDennELEEIEK 751
                 7****************55533334444443256***************9999999988863344444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.83u 0.31s 00:00:01.13 Elapsed: 00:00:00.47
# Mc/sec: 9214.61
//
Query:       KHJ32566.1  [L=610]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-18   66.2  16.3    4.3e-05   24.2   0.2    7.1  7  WD40          WD domain, G-beta repeat
    0.00073   19.8   0.0      0.067   13.5   0.0    3.7  4  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
  ------ inclusion threshold ------
      0.018   13.6   0.6         10    4.5   0.0    3.7  4  Cytochrom_D1  Cytochrome D1 heme domain
      0.067   13.2   0.5       0.54   10.3   0.0    2.8  3  PD40          WD40-like Beta Propeller Repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.011        49      17      38 .]     210     231 ..     196     231 .. 0.83
   2 ?   -1.0   0.0       0.9     4e+03      14      26 ..     254     266 ..     246     276 .. 0.80
   3 !    7.0   0.1    0.0026        11      12      38 .]     307     334 ..     297     334 .. 0.84
   4 !   24.2   0.2   9.6e-09   4.3e-05       2      38 .]     339     378 ..     338     378 .. 0.79
   5 !   12.9   0.1   3.7e-05      0.16       5      38 .]     389     423 ..     386     423 .. 0.91
   6 !   19.8   0.1   2.3e-07    0.0011       5      38 .]     469     509 ..     466     509 .. 0.78
   7 ?    2.8   0.3     0.054   2.4e+02      12      32 ..     550     570 ..     539     584 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.011
                 EEETTSSEEEEEETTSEEEEEE CS
        WD40  17 afspdgawlasGsdDgtvriWd 38 
                 +fs+dg+++++  +D +vr++d
  KHJ32566.1 210 QFSDDGNFFFAVNKDFKVRMYD 231
                 59********999*******98 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.9
                 EEEEEETTSSEEE CS
        WD40  14 tslafspdgawla 26 
                 t+ + spd+++la
  KHJ32566.1 254 TDASLSPDNKYLA 266
                 6677899*99997 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0026
                 S.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 s.vtslafspdgawlasGsdDgtvriWd 38 
                 + ++s+++s dg+ l++G   g + ++d
  KHJ32566.1 307 FgIWSIRYSGDGRNLVAGATSGLILVYD 334
                 14****************8899999987 PP

  == domain 4  score: 24.2 bits;  conditional E-value: 9.6e-09
                 EEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 
                 ++++ ++GH  +v++++   +++ + l sGsdD t+++Wd
  KHJ32566.1 339 RQIHQIRGHdEDVNAVClaDNSSPHILYSGSDDTTLKMWD 378
                 568999***8779766653666666678***********9 PP

  == domain 5  score: 12.9 bits;  conditional E-value: 3.7e-05
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++tGH  + t ++   dg++++s ++D++ ++Wd
  KHJ32566.1 389 GIFTGHiEGLTYIDSKGDGRYILSNGKDQSTKLWD 423
                 589***88888888*********8899*******9 PP

  == domain 6  score: 19.8 bits;  conditional E-value: 2.3e-07
                 EEEESS...SS.EEEEE...EETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH...ss.vtsla...fspdgawlasGsdDgtvriWd 38 
                  t++GH   +  +++      s +++++ sGs Dg+v+iW+
  KHJ32566.1 469 VTYRGHrvlKTlIRCHFsppGSTNSKYIYSGSQDGKVYIWN 509
                 689***766557844434888888888*************8 PP

  == domain 7  score: 2.8 bits;  conditional E-value: 0.054
                 SEEEEEEETTSSEEEEEETTS CS
        WD40  12 svtslafspdgawlasGsdDg 32 
                 +v++ +++p  + l+++ ++g
  KHJ32566.1 550 CVRDASWHPTAPILVASAWNG 570
                 377778********9876644 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.21   9.2e+02      45      69 ..     210     234 ..     203     246 .. 0.86
   2 !   13.5   0.0   1.5e-05     0.067      36      85 ..     304     352 ..     289     379 .. 0.87
   3 ?   -0.7   0.0      0.39   1.7e+03      46      78 ..     403     435 ..     391     444 .. 0.82
   4 ?   -2.1   0.0       1.1   5.1e+03      39      60 ..     549     570 ..     541     573 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.21
  ANAPC4_WD40  45 aWkpdgklLavaysdgevrlldaes 69 
                  +++ dg+++  + +d +vr++d ++
   KHJ32566.1 210 QFSDDGNFFFAVNKDFKVRMYDTSN 234
                  6899*****************9876 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 1.5e-05
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavt 85 
                  +++  + s++++ dg+ L+ +   g + ++d+es + +h+++ ++e+ v+
   KHJ32566.1 304 QSSFGIWSIRYSGDGRNLVAGATSGLILVYDIESRRQIHQIRGHDED-VN 352
                  45556889*********************************998885.44 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.39
  ANAPC4_WD40  46 WkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                   k dg+ +    +d + +l d+  +  +++++ 
   KHJ32566.1 403 SKGDGRYILSNGKDQSTKLWDVRMAMSLQHYEQ 435
                  4899******************99999988875 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 1.1
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdg 60 
                    vr+ +W+p   +L+ +  +g
   KHJ32566.1 549 TCVRDASWHPTAPILVASAWNG 570
                  6799999***999999887666 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.014        65      40      66 ..     208     234 ..     194     268 .. 0.81
   2 ?    1.3   0.0     0.022        98     173     265 ..     253     345 ..     236     382 .. 0.70
   3 ?    0.4   0.0     0.041   1.8e+02      45      80 ..     405     440 ..     399     458 .. 0.82
   4 ?    4.5   0.0    0.0023        10      28      64 ..     474     510 ..     465     543 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.014
                   EEE-TT.SSEEEEEETTSEEEEEESSS CS
  Cytochrom_D1  40 srvfasdgRyvyvigRDgkvtliDLwa 66 
                   s  f+ dg + + + +D kv ++D  +
    KHJ32566.1 208 SGQFSDDGNFFFAVNKDFKVRMYDTSN 234
                   5679999****************9754 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.022
                   EEEEEE-TTSSEEEEEEGGGT.EEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEE..EBSSSSEEEEEE--TTT.-TTTBTSEEEEEE CS
  Cytochrom_D1 173 lhDggldpdkRYflaaanaed.kvavvdtkegklvilldvgktphklrvanmvHlelGpvWtt..shkgdfvvsligtdsesvldeqaWkvvkeik 265
                   l D++l+pd++Y+  +   ++  +a +d+++ +   +ld ++++      n    ++   W++  s++g + v+  + + + v+d ++ +++++i+
    KHJ32566.1 253 LTDASLSPDNKYLAYTSIHSNvCLAPTDPNDIGDPYILDLARQQDGNTARNQSSFGI---WSIrySGDGRNLVAGATSGLILVYDIESRRQIHQIR 345
                   778888888888887777777677888888888888888887766555555444333...655113444455555555556666666666666665 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.041
                   T.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEEE CS
  Cytochrom_D1  45 sdgRyvyvigRDgkvtliDLwakeivaevkiGlnar 80 
                    dgRy++  g+D  ++l D+ +   +++ ++  nar
    KHJ32566.1 405 GDGRYILSNGKDQSTKLWDVRMAMSLQHYEQVKNAR 440
                   69***************9998887666666666665 PP

  == domain 4  score: 4.5 bits;  conditional E-value: 0.0023
                   EEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEES CS
  Cytochrom_D1  28 lavletgyalHisrvfasdgRyvyvigRDgkvtliDL 64 
                     vl+t+   H s+  + + +y+y  + Dgkv +  L
    KHJ32566.1 474 HRVLKTLIRCHFSPPGSTNSKYIYSGSQDGKVYIWNL 510
                   5789999************************988766 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       2.7   1.2e+04      16      22 ..     211     217 ..     211     220 .. 0.71
   2 ?   10.3   0.0   0.00012      0.54      13      28 ..     255     270 ..     254     280 .. 0.89
   3 ?   -1.7   0.0      0.67     3e+03      14      24 ..     312     322 ..     311     322 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2.7
                 E-TTSSE CS
        PD40  16 fSPDGkr 22 
                 fS DG+ 
  KHJ32566.1 211 FSDDGNF 217
                 8999964 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00012
                 EEEE-TTSSEEEEEEE CS
        PD40  13 aPsfSPDGkrlaFsSd 28 
                 + s+SPD k+la++S 
  KHJ32566.1 255 DASLSPDNKYLAYTSI 270
                 6799**********95 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.67
                 EEE-TTSSEEE CS
        PD40  14 PsfSPDGkrla 24 
                 +++S DG+ l+
  KHJ32566.1 312 IRYSGDGRNLV 322
                 689*****986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (610 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 4542.59
//
Query:       KHJ32567.1  [L=209]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-53  179.6  11.5    4.1e-53  179.4  11.5    1.1  1  SYS1      Integral membrane protein S linking to the trans Go
  ------ inclusion threshold ------
      0.052   11.9   8.0       0.06   11.6   8.0    1.0  1  DUF2070   Predicted membrane protein (DUF2070)
       0.43   10.5   6.1       0.87    9.5   6.1    1.4  1  DUF2975   Protein of unknown function (DUF2975)
       0.58   10.4   3.7        0.3   11.3   0.9    2.0  2  DUF423    Protein of unknown function (DUF423)
        2.7    8.3  12.0       0.66   10.3   0.4    2.8  3  DUF4064   Protein of unknown function (DUF4064)


Domain annotation for each model (and alignments):
>> SYS1  Integral membrane protein S linking to the trans Golgi network
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.4  11.5   1.1e-56   4.1e-53       4     144 .]      14     154 ..      11     154 .. 0.98

  Alignments for each domain:
  == domain 1  score: 179.4 bits;  conditional E-value: 1.1e-56
        SYS1   4 aeldPlkilsqivllqlayYliaavlilltallagkelsldllfswesldvddtsgrllilvwvlnslvvvlallllveRsKlalDFalTihvihlvvv 102
                 +e  Plkil+qiv++ql+yYl+a++li++ al+agk+++ldl+f+w+sl++d+t+g++l+++wvlns+++++ +l+lv+RsKl+lDFalT+h+ihl++v
  KHJ32567.1  14 NEYAPLKILTQIVIVQLVYYLSALILIIFSALVAGKRFNLDLVFNWRSLRGDTTVGWMLGMIWVLNSFTGIVLMLVLVRRSKLVLDFALTLHFIHLLTV 112
                 6789*********************************************************************************************** PP

        SYS1 103 slytralPaslaWwllqvlsaaimivlgeylcrrrelkeiil 144
                 s+y+++lP+++ Ww++q++sa  +i++g + c++rel++i +
  KHJ32567.1 113 SVYSHSLPRNIIWWATQFISAGTIIFMGVWSCQWRELQPISF 154
                 ****************************************87 PP

>> DUF2070  Predicted membrane protein (DUF2070)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   8.0   1.7e-05      0.06      38     147 ..      22     139 ..      10     171 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.7e-05
     DUF2070  38 lfgillfglpalvaflltlpvlrilggr.......ltykrs...lflalltelivviisllaillsallqalvllalvlslalvfalrllvlvavsdes 126
                 l++i+++ l + +++l++  +  ++ g+       ++++     +++  +  +i+v+ s+ +i+l ++l  +    lvl++al++ +  l++v+v ++s
  KHJ32567.1  22 LTQIVIVQLVYYLSALILIIFSALVAGKrfnldlvFNWRSLrgdTTVGWMLGMIWVLNSFTGIVLMLVL--VRRSKLVLDFALTLHFIHLLTVSVYSHS 118
                 55667777777777777777777776666888887888887999**********************988..45577999******************** PP

     DUF2070 127 llkavlpaliqpllailllvl 147
                 l++ ++  ++q ++a  ++++
  KHJ32567.1 119 LPRNIIWWATQFISAGTIIFM 139
                 *****9999998887766665 PP

>> DUF2975  Protein of unknown function (DUF2975)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   6.1   0.00024      0.87      10     105 ..      13     110 ..      10     116 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00024
     DUF2975  10 ypeaaglrvp...vlllgvlallafvvalvqlwkLlrsirkgevFspanvrrLrriglaliaaalllaagivalallaelelapgvvllllgvafaslv 105
                  +e+a+l+++   v++  v +l+a++++++ ++   ++ + + vF++++ r   ++g++l ++++l  +++++l+l+     + +v++++l + f+ l+
  KHJ32567.1  13 INEYAPLKILtqiVIVQLVYYLSALILIIFSALVAGKRFNLDLVFNWRSLRGDTTVGWMLGMIWVLNSFTGIVLMLVLV-RRSKLVLDFALTLHFIHLL 110
                 6788888888776666677777777777777777889999***********************8888777777777777.3567888888888887654 PP

>> DUF423  Protein of unknown function (DUF423)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.66   2.4e+03      48      48 ..      62      62 ..      28     100 .. 0.55
   2 ?   11.3   0.9   8.5e-05       0.3      30      68 ..     104     141 ..      87     152 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.66
      DUF423 48 s 48
                 
  KHJ32567.1 62 L 62
                1 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 8.5e-05
      DUF423  30 yhalallavallaskaaasrllklagllflaGivlFSgs 68 
                 +h + ll v+++ s++  ++++ +a+ ++ aG+++F g 
  KHJ32567.1 104 LHFIHLLTVSVY-SHSLPRNIIWWATQFISAGTIIFMGV 141
                 466668888888.77899******************885 PP

>> DUF4064  Protein of unknown function (DUF4064)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.7    0.0046        16      52      84 ..      17      49 ..      12      54 .. 0.88
   2 ?   10.3   0.4   0.00018      0.66      58      88 ..      66      96 ..      60     109 .. 0.89
   3 ?   -3.2   0.4       2.8     1e+04      21      96 ..     134     139 ..     123     144 .. 0.45

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0046
     DUF4064 52 avleflstllivlgvialiaivlgivgalllkk 84
                a l +l++ +iv +v+ l a++l+i++al+  k
  KHJ32567.1 17 APLKILTQIVIVQLVYYLSALILIIFSALVAGK 49
                66889999*******************998765 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00018
     DUF4064 58 stllivlgvialiaivlgivgalllkknkkv 88
                +t++++lg+i+++ ++ giv +l+l + +k+
  KHJ32567.1 66 TTVGWMLGMIWVLNSFTGIVLMLVLVRRSKL 96
                5789********************9988883 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 2.8
     DUF4064  21 lllllflfllssgefsqelteeqalsgedasavleflstllivlgvialiaivlgivgalllkknkkvsGilfiia 96 
                 ++                                                                      +i++
  KHJ32567.1 134 GT----------------------------------------------------------------------IIFM 139
                 22......................................................................2222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       762  (0.042501); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.36
# Mc/sec: 1761.02
//
Query:       KHJ32568.1  [L=118]
Description: putative cytochrome c oxidase subunit vib protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.7e-22   77.5   7.1    7.9e-22   77.3   7.1    1.1  1  COX6B         Cytochrome oxidase c subunit VIb
  ------ inclusion threshold ------
      0.088   13.0   0.0       0.14   12.4   0.0    1.3  1  PP-binding_2  Acyl-carrier
       0.11   12.9   1.7       0.23   11.8   1.6    1.5  1  Pet191_N      Cytochrome c oxidase assembly protein PET191


Domain annotation for each model (and alignments):
>> COX6B  Cytochrome oxidase c subunit VIb
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.3   7.1   1.3e-25   7.9e-22       2      75 ..      23      96 ..      22      97 .. 0.96

  Alignments for each domain:
  == domain 1  score: 77.3 bits;  conditional E-value: 1.3e-25
       COX6B  2 raPnknqrkaCwearddyfkCldkkgeekaekkeeqdekkCkaekkeyesnCaksWveyfkekrvlekreerll 75
                +aP++ qr++Cweard++fkCld++++ ++ +++e+++k C+ e+k ++  Ca+sWv+yfk++rv e ++ ++l
  KHJ32568.1 23 IAPDRTQRQKCWEARDAFFKCLDQHEIIDSIREKEKADKFCNLEEKPFRTECASSWVTYFKQRRVAEWKKAQTL 96
                79*****************************************************************9999987 PP

>> PP-binding_2  Acyl-carrier
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   2.4e-05      0.14      39      79 ..      27      67 ..      15      72 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.4e-05
  PP-binding_2 39 rtredrlwdgldtvefvedveelfdvivsdevadnfetlqe 79
                  rt+ ++ w++ d+    +d  e++d i   e ad+f  l+e
    KHJ32568.1 27 RTQRQKCWEARDAFFKCLDQHEIIDSIREKEKADKFCNLEE 67
                  8999********************************99987 PP

>> Pet191_N  Cytochrome c oxidase assembly protein PET191
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.6   3.8e-05      0.23       2      55 ..      31      86 ..      30      89 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.8e-05
    Pet191_N  2 ksCkdlrealaeClqks...dCvkkerktpkeClkekaeelpeeCkqlrkayfeCkr 55
                ++C + r+a+ +Cl +    d +++++k  k C  e+ + + +eC +   +yf+ +r
  KHJ32568.1 31 QKCWEARDAFFKCLDQHeiiDSIREKEKADKFCNLEE-KPFRTECASSWVTYFKQRR 86
                68************99822245677788889998888.89************98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.34u 0.22s 00:00:00.56 Elapsed: 00:00:00.34
# Mc/sec: 1033.81
//
Query:       KHJ32569.1  [L=73]
Description: hypothetical protein EV44_g3735 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       234  (0.0130515); expected 358.6 (0.02)
Passed bias filter:                      176  (0.0098165); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.23s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 570.64
//
Query:       KHJ32570.1  [L=865]
Description: hypothetical protein EV44_g0595 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (865 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1722  (0.0960455); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                       105  (0.00585643); expected 17.9 (0.001)
Passed Fwd filter:                        59  (0.00329076); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.91u 0.38s 00:00:02.29 Elapsed: 00:00:00.61
# Mc/sec: 4285.48
//
Query:       KHJ32571.1  [L=603]
Description: putative lysophospholipase plb1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.8e-169  564.3   1.2   2.1e-169  564.1   1.2    1.0  1  PLA2_B    Lysophospholipase catalytic domain


Domain annotation for each model (and alignments):
>> PLA2_B  Lysophospholipase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  564.1   1.2  1.2e-173  2.1e-169       1     491 []     125     602 ..     125     602 .. 0.97

  Alignments for each domain:
  == domain 1  score: 564.1 bits;  conditional E-value: 1.2e-173
      PLA2_B   1 iaiavSGGGyramltgaGvlkAldsRtdnat...glgGlLqsatYlaGlsGgsWlvgslavNnftsvqelskkkeddsvweleksiln.p.eglelvkn 94 
                 iaia+SGGGyra+++gaG+l+A d+Rt+ +t   ++gGlLq++tY++GlsGg Wlvgs++ Nnf++v++l++  +d s+w++ +sil+ p  + +++++
  KHJ32571.1 125 IAIAISGGGYRALMSGAGFLAAADARTKSSTspgHIGGLLQATTYVSGLSGGGWLVGSVFANNFSTVESLRDGGKDSSLWKFGNSILEgPeIKGQIFDT 223
                 8**************************99998999**************************************99*************7556889**** PP

      PLA2_B  95 ikrydeivdevekKkdagfnvsltDiwGralseklveaeeggvnltlsslkdaekfqeaemplPiivadgrkpgetvinlNatvfEfsPyelgswdakl 193
                 +++ ++i ++v++K+dagfnvs tD wGrals +l++a +gg+++t+ss++ ++ f+++ +plP+iv+     +++  ++ ++vfE++P+elg+wd+++
  KHJ32571.1 224 VTYIKKILKNVSSKQDAGFNVSATDFWGRALSFQLIDAPDGGPAYTFSSIALQDAFKDGSIPLPMIVTIRSVSDSEQNSIMSNVFEMNPFELGTWDTNI 322
                 ********************************************************************99999999999999***************** PP

      PLA2_B 194 nsFvpveylGtklsnGtvvkkgkcvagfdnaGflmgtsstlFnevlleinstsmlesllkellkkllkdlsedsedisqyapnpfkdaeeenqnatqsi 292
                  +Fvp+eylG+++s G+v+  g+cv+gfd++Gfl+g+ stlF  v+ ++ +++     + ++++k l  l + ++d++q++pnpf +++      +++ 
  KHJ32571.1 323 AGFVPMEYLGSNFSDGAVPLGGDCVKGFDQVGFLIGATSTLFEAVINQVVKSE-----TISFFRKALYALTKGNNDVAQFQPNPFFGFN----PEANPT 412
                 **********************************************9998888.....457788889999999****************....8899** PP

      PLA2_B 293 vesktLdlvdggedgqniplvpllqkerevdvifaldnsadteeswpdgvslvatyeRvleskqvkgkkfpyvpdqntfvnlgLnkrptffGcDarnlt 391
                 v+sk L lvdgg dgqn+pl pllq++r+vdvifa+d+sad+++  p+g++lvatyeR l+ k  +  +fp +pdqntfvnlgLnkrptffGcDa+n t
  KHJ32571.1 413 VKSKDLPLVDGGLDGQNLPLLPLLQQSRKVDVIFAVDSSADSQN-FPNGTALVATYERALKGKFNSKFSFPSIPDQNTFVNLGLNKRPTFFGCDASNIT 510
                 ********************************************.9***************8888888******************************* PP

      PLA2_B 392 dlsatvdestpPlvvylpnekysylsnlstfklsykdseregliengfeaatqdnetdddefaacvacaiirRklerknltlpsecekcFedycwngtv 490
                           +Pl+vy+pn++ys+ sn+stfk +y++s r+++i+ng+e +tq n t d+++ +c++ca ++R++ r+ ++ p +c++cF+ ycwngt+
  KHJ32571.1 511 GD--------APLIVYIPNSEYSAASNTSTFKRKYSESLRNQIIQNGYEFSTQANGTVDPQWPVCMGCAALSRSMTRTRTPIPTACQNCFSSYCWNGTL 601
                 99........9**************************************************************************************98 PP

      PLA2_B 491 d 491
                 +
  KHJ32571.1 602 N 602
                 5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (603 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 4334.17
//
Query:       KHJ32572.1  [L=144]
Description: putative ssdna binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-17   62.4   0.1    4.2e-17   62.1   0.1    1.1  1  SSB       Single-strand binding protein family


Domain annotation for each model (and alignments):
>> SSB  Single-strand binding protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   0.1   2.4e-21   4.2e-17       2     103 ..      31     129 ..      30     130 .. 0.93

  Alignments for each domain:
  == domain 1  score: 62.1 bits;  conditional E-value: 2.4e-21
                 CEEEEEEEESSS-EEEEETTSEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEE...HHHHHHHHHH--TT-EEEEEEEEEEEEEECTTSCEEEEEEEE CS
         SSB   2 nkvilvGrlgkdpelrqtesGnavarftlatnrrfkdqegekdeetewhrvvvf...gklaevvaeylkkGslvyveGrlqtrkyedqegqkrysteiv 97 
                  k++lvGrlg +pel+ t +G++++++++ t+        +++++t+w++v+ f   g + +++a  l+kG+l+yveG++++++y+d eg++r  ++iv
  KHJ32572.1  31 AKITLVGRLGGTPELQATSTGKEILKYSIGTSI-----GRGENQKTSWFKVTGFlpeGPQRDFIAG-LEKGTLLYVEGNVTMNQYQDGEGTTRNGLNIV 123
                 599*****************************9.....68899*********99654558888888.******************************** PP

                 EEEEEE CS
         SSB  98 aeevqf 103
                 ++++++
  KHJ32572.1 124 QQKIEV 129
                 **9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       339  (0.0189079); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 1025.39
//
Query:       KHJ32573.1  [L=463]
Description: putative bhlh family transcription factor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-07   29.3   0.0    1.2e-06   28.4   0.0    1.4  1  HLH       Helix-loop-helix DNA-binding domain


Domain annotation for each model (and alignments):
>> HLH  Helix-loop-helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.0   6.5e-11   1.2e-06       1      51 [.     390     439 ..     390     440 .. 0.94

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 6.5e-11
                 HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHH CS
         HLH   1 rraahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkh 51 
                 +r++h   E++RR  i++++e L el+P + ++   sK+++L +A + +  
  KHJ32573.1 390 KRENHIRSEQKRRTLIREGFEDLNELVP-GLQGGGYSKSAVLAQAADWLEN 439
                 79**************************.899999**********998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3336.38
//
Query:       KHJ32574.1  [L=302]
Description: putative 50s ribosomal subunit protein l15 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-28  100.4   0.6    1.9e-28   99.7   0.6    1.4  1  Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27


Domain annotation for each model (and alignments):
>> Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.7   0.6   1.1e-32   1.9e-28       1     128 []      67     191 ..      67     191 .. 0.95

  Alignments for each domain:
  == domain 1  score: 99.7 bits;  conditional E-value: 1.1e-32
                     GGGGTSSTTTTTTTTT-S--......S--.........---GGG..---EEEEHHHHHHTTTTGTTS------EEEGGGTTTTSSS.....SEEE CS
  Ribosomal_L27A   1 kGktgGrGhkGqkkrsgvkkkpgfeGGqmplyrrlpkrGfknskfkkeykvvnlkdLdelideerleladeaeeidleelaeaglikk.kdgvKv 94 
                     kGkt+GrG+kGqk++  +k+ +  +GGq+ l   + +rGf n +f+ e++vvnl++++++i+++r+   d++++i+++el+++++i++ kdgvK+
      KHJ32574.1  67 KGKTSGRGQKGQKAH--GKVPALMQGGQTSLNVVHGERGFDN-PFSIEMSVVNLDRIQSWINQGRI---DPSKPITINELVKTRCIHGiKDGVKL 155
                     6**************..67766799***************98.89*********************...7789********************** PP

                     E--S..---.--EEEESEE-HHHHHHHHHTT-EEEE CS
  Ribosomal_L27A  95 lgkg..eltkklkvkaskfSkkAkekIeaaGGkvel 128
                     l++   +l++++++ +s++S++A++++e+ GG+v++
      KHJ32574.1 156 LARNkdDLKTPINILVSRASATAIKAVESIGGTVVT 191
                     **976799*************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       364  (0.0203023); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2301.34
//
Query:       KHJ32575.1  [L=227]
Description: hypothetical protein EV44_g1750 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.8e-13   49.3   0.0    6.4e-13   48.6   0.0    1.3  1  Integrase_H2C2  Integrase zinc binding domain


Domain annotation for each model (and alignments):
>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.6   0.0   3.6e-17   6.4e-13       4      57 ..     130     185 ..     129     186 .. 0.97

  Alignments for each domain:
  == domain 1  score: 48.6 bits;  conditional E-value: 3.6e-17
  Integrase_H2C2   4 slrkeilkeaHds..agHlGiektlerlrrryyWpgmrkdvkkyvksCetCqrrkp 57 
                     +lr e+++++Hds  +gH+G+e  +++++r+++ pgm kd++ +v  C +  r+k+
      KHJ32575.1 130 NLRTELIQKVHDSplSGHPGRELNYALVARQFFLPGMAKDIRTFVGICNEYERNKA 185
                     59***************************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       279  (0.0155614); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1831.91
//
Query:       KHJ32576.1  [L=707]
Description: putative px domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-19   68.2   1.7    7.8e-19   67.7   0.2    2.0  2  PX        PX domain


Domain annotation for each model (and alignments):
>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1      0.41   7.3e+03      32      43 ..     285     296 ..     275     298 .. 0.76
   2 !   67.7   0.2   4.3e-23   7.8e-19      15     111 ..     345     438 ..     328     439 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.41
                 SSEEEEEEEHHH CS
          PX  32 akewtvkRrYsd 43 
                 ++++tv+++Ys 
  KHJ32576.1 285 DSYKTVNKQYSN 296
                 7899******95 PP

  == domain 2  score: 67.7 bits;  conditional E-value: 4.3e-23
                 TTSSEEEEEEEEEETTSSSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSS...CTTSHHHHHHHHHHHHHHHHHHHTSCHHHHSHHHHHHH CS
          PX  15 gskkhsyylyevelktgakewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsv...rkkdeefiekrrkgLeeyLqrllnhpelrnsevlteFL 110
                   ++h y +++v+ +     ++v Rr+sdF++L + L+++fp +++P lP+k++   +    + d+ fiekrr+gL ++ + l++hp+l++++ + +FL
  KHJ32576.1 345 LFQHHCYHVINVQKG-----HKVVRRFSDFVWLLDCLQKRFPFRQLPLLPPKRVGL-NgnhLATDKTFIEKRRRGLSRFTNALIRHPVLSQDKLVIDFL 437
                 455566666666666.....58*******************************654.45777889*********************************9 PP

                 H CS
          PX 111 e 111
                 +
  KHJ32576.1 438 T 438
                 7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (707 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       811  (0.045234); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.23s 00:00:00.83 Elapsed: 00:00:00.39
# Mc/sec: 5456.19
//
Query:       KHJ32577.1  [L=961]
Description: putative vacuolar protein sorting protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.4e-42  144.3   0.3    5.9e-42  143.0   0.1    1.8  2  Pep3_Vps18    Pep3/Vps18/deep orange family
    3.3e-10   40.0   5.8    7.5e-07   29.1   0.0    3.9  3  Clathrin      Region in Clathrin and VPS
     0.0022   17.9   0.8     0.0065   16.4   0.8    1.8  1  zf-RING_5     zinc-RING finger domain
     0.0023   17.7   2.3     0.0023   17.7   2.3    2.1  2  zf-RING_11    RING-like zinc finger
     0.0026   17.6   1.1       0.01   15.7   1.1    2.1  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
     0.0031   17.1   0.1     0.0031   17.1   0.1    1.7  1  Zn_ribbon_17  Zinc-ribbon, C4HC2 type
     0.0037   17.5   0.1      0.013   15.8   0.1    2.0  1  DUF2175       Uncharacterized protein conserved in archaea (D
     0.0078   16.0   0.0      0.019   14.8   0.0    1.6  1  YiiD_C        Putative thioesterase (yiiD_Cterm)
  ------ inclusion threshold ------
      0.012   15.9   0.3      0.036   14.3   0.3    1.8  1  zf-rbx1       RING-H2 zinc finger domain
      0.018   15.0   0.2      0.063   13.3   0.2    1.9  1  zf-RING_UBOX  RING-type zinc-finger
      0.028   14.7   0.7        0.1   13.0   0.7    2.0  1  zf-RING_2     Ring finger domain
       0.03   14.9   0.1      0.097   13.2   0.1    1.8  1  Syntaxin-6_N  Syntaxin 6, N-terminal
      0.084   12.9   0.1       0.22   11.6   0.1    1.7  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
       0.12   12.9   0.0       0.28   11.7   0.0    1.7  1  Vps39_2       Vacuolar sorting protein 39 domain 2
       0.13   12.2   0.0       0.38   10.7   0.0    1.8  1  Nre_C         Archaeal Nre, C-terminal
        1.9    8.4   4.7       0.38   10.7   0.7    1.9  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
        1.9    8.6   7.6       0.13   12.3   2.2    1.9  2  zf-C3H2C3     Zinc-finger


Domain annotation for each model (and alignments):
>> Pep3_Vps18  Pep3/Vps18/deep orange family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.0   0.1   5.6e-45   5.9e-42       3     148 ..     278     432 ..     276     433 .. 0.92
   2 ?   -3.5   0.0       7.8   8.2e+03     117     133 ..     579     595 ..     572     600 .. 0.82

  Alignments for each domain:
  == domain 1  score: 143.0 bits;  conditional E-value: 5.6e-45
                 EEEETT-----....--TTTT-EEEEGGGSS......---------EEEEEE-SSEEEEEETTEEEEEETTT--EEEEEE--------EEEEEEETTTT CS
  Pep3_Vps18   3 yhgelslsats....ekvlseakllpypela......kkaeessespksiaLTefHillLyedrvvavnrLneevvfeeslekesgekllglvaDpvkn 91 
                 ++g l +++t+     k++++ak+l+ ++l+      ++++  ++ ++si+LT++Hi+ L+++rv+ +nr++++vvf++ +  e+g++ lgl+aD++kn
  KHJ32577.1 278 FYGPLITTPTTselgTKLFTQAKMLSSSKLPssesigEQRKTAQDFVESIVLTQWHIIHLVGGRVICTNRIDDQVVFNQVV-LEPGQQCLGLFADQKKN 375
                 5666666444445678999**********9878889888899***************************************.89999************ PP

                 EEEEEESS-EEEEEEESHHHHHHHHH-XXXXXXXXXXXX.XXXXXXXXXXXXXXXXX CS
  Pep3_Vps18  92 tfWlftnksifelvvrdEdrdvWklylekgkFdeAlklaknpaqrdqVltaqadalf 148
                 t+Wl t+++ife+vv+dE+rd+Wk++l+ ++F+ A k+a++ +q+d V+ta++++l+
  KHJ32577.1 376 TYWLITTEEIFEIVVSDEERDIWKIMLKIENFEMASKYARSHSQKDIVATASGENLI 432
                 ******************************************************997 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 7.8
                 H-XXXXXXXXXXXX.XX CS
  Pep3_Vps18 117 ylekgkFdeAlklaknp 133
                  ++++k++eAl++ k++
  KHJ32577.1 579 WMQREKWKEALNVLKKQ 595
                 57899******999865 PP

>> Clathrin  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.2     0.051        53      51     118 ..     400     470 ..     394     485 .. 0.72
   2 !    7.5   0.2    0.0033       3.4      62     131 ..     534     604 ..     528     616 .. 0.86
   3 !   29.1   0.0   7.1e-10   7.5e-07      25     128 ..     650     763 ..     646     777 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.051
                 HHHHTT-HHHHHHTTSS---..S-TTHHHHHHHT-SSHHHHHHHHHT.TXTHSSHSSXSSSSHCSCHHHHT CS
    Clathrin  51 lyakyddpqeleeflkknnn..ydlekvaklcekadlyeeavilykk.inefkkaisllkklkdfddaiey 118
                 +++k ++++ + ++ +++++  + +   ++ + +++l++ea +++ k  + f++++ +l +++++d   +y
  KHJ32577.1 400 IMLKIENFEMASKYARSHSQkdIVATASGENLIQKGLFNEAAVILGKtSKSFEQVALTLIENDQYDALKRY 470
                 66666667777777776666444444456778999999999999999788888877767787888765555 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0033
                 HHTTSS---.S-TTHHHHHHHT-SSHHHHHHHHHTTXTHSSHSSX.SSSSHCSCHHHHTTTTTXXSHHHHHH CS
    Clathrin  62 eeflkknnn.ydlekvaklcekadlyeeavilykkinefkkaisl.lkklkdfddaieyaakvsnpelwekl 131
                 ++f+ ++ +  d+++  ++ + ++  ee+++  ++in+++ ++   +++ + +++a+++++k+++pe+ ++ 
  KHJ32577.1 534 QDFVMRYKTeLDKKTTYDIISSHGREEELLFFASAINDYNFVLGYwMQR-EKWKEALNVLKKQKDPEIFYRY 604
                 677777777799999999***********************99984555.9****************99875 PP

  == domain 3  score: 29.1 bits;  conditional E-value: 7.1e-10
                 HHCHHHCCHHHCHTS--HHHHHHHHHHHHHT...T-HHHHHHTTSS---...S-TTHHHHHHHT-SSHHHHHHHHHTTXTHSSHSSXSSSSHCSCHHHH CS
    Clathrin  25 elleyLekvlkedskenpalqtallelyaky...ddpqeleeflkknnn...ydlekvaklcekadlyeeavilykkinefkkaisllkklkdfddaie 117
                 ++  yL  ++++ +  +pa+++ l+ +ya +   d+ + l+++l +  +   +d +++++lc k+  ++  v +y+ ++++ +a++l+  ++++d a  
  KHJ32577.1 650 QAVRYLLHCVNNLKSTDPAVHNTLISIYASHptkDE-SALLSYLVSQGEepfFDSDFALRLCIKFTRVQSCVHIYSSMGQYLQAVDLALSHSAIDLATL 747
                 67889*****9999999*************999666.9******97777788***********************************888899998886 PP

                 TTTTTXX.....SHHH CS
    Clathrin 118 yaakvsn.....pelw 128
                 +a ++ +     ++lw
  KHJ32577.1 748 IADRSLSnpplrKKLW 763
                 6666544455555555 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.8   6.2e-06    0.0065       1      33 [.     859     890 ..     859     900 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 6.2e-06
   zf-RING_5   1 hCnkCfeklskeekfyltsCgHifCekClkkll 33 
                 +C  C  +l  +++f++ +C+H f+++C+ k+ 
  KHJ32577.1 859 KCYTCGLPL-LSRQFFVFPCQHAFHSDCIGKKV 890
                 699999999.9******************9876 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       9.5     1e+04      17      24 ..     716     723 ..     714     723 .. 0.79
   2 !   17.7   2.3   2.1e-06    0.0023      14      29 .]     871     886 ..     868     886 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 9.5
  zf-RING_11  17 ilpCsHtF 24 
                 + +C H++
  KHJ32577.1 716 VQSCVHIY 723
                 678***97 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 2.1e-06
  zf-RING_11  14 alfilpCsHtFHfkCI 29 
                   f+ pC H+FH++CI
  KHJ32577.1 871 QFFVFPCQHAFHSDCI 886
                 56899**********9 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   1.1   9.7e-06      0.01       7      32 ..     866     892 ..     859     896 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 9.7e-06
  zf-C3HC4_2   7 dmlkdpsvvtpCgHvfCqkCilr.sLe 32 
                   l+    v+pC+H f+++Ci +  Le
  KHJ32577.1 866 PLLSRQFFVFPCQHAFHSDCIGKkVLE 892
                 4667778899***********884555 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   2.9e-06    0.0031       4      35 ..     857     888 ..     854     898 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 2.9e-06
  Zn_ribbon_17   4 lksCayCelavkgrvvlcgvCeHvlHasCare 35 
                    ++C  C l++  r ++   C+H  H++C+ +
    KHJ32577.1 857 GEKCYTCGLPLLSRQFFVFPCQHAFHSDCIGK 888
                   579**************************866 PP

>> DUF2175  Uncharacterized protein conserved in archaea (DUF2175)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.1   1.2e-05     0.013       4      57 ..     859     911 ..     858     931 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.2e-05
     DUF2175   4 kCyiCgkeivegekFTftkkgvvHyeClvekarkklkesedaaaLleleevlne 57 
                 kCy Cg  + + + F f  + + H +C+ +k+ + +++ ++  +++el++++ +
  KHJ32577.1 859 KCYTCGLPLLSRQFFVFPCQHAFHSDCIGKKVLEDATT-SKSRMIRELQSLVLK 911
                 8*********************************9998.888899999876543 PP

>> YiiD_C  Putative thioesterase (yiiD_Cterm)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.8e-05     0.019      51     116 ..     483     548 ..     474     560 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.8e-05
      YiiD_C  51 iytlatltgWglvwLqlkeaglkgdiVladakikYlkPvtedptaqvslpeeealeedleslarkk 116
                 i++ ++++gW + +     + l++ +V+++ +i+Y +P +++  ++ +l+ ++ + + +++l++k 
  KHJ32577.1 483 IMQRMMIAGWLIEIFMSILNSLEEAVVIKTEDIEYPSPQKDEQLSTIKLEFQDFVMRYKTELDKKT 548
                 677899******9999999******************************97777777777777665 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.3   3.4e-05     0.036      12      43 ..     858     888 ..     853     895 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 3.4e-05
     zf-rbx1  12 eacieckapgdeecpvvlGeCgHaFHlhCisk 43 
                 e+c++c  p  ++   v+  C+HaFH +Ci k
  KHJ32577.1 858 EKCYTCGLPLLSRQFFVF-PCQHAFHSDCIGK 888
                 577888888777444444.9**********76 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.2     6e-05     0.063      15      26 ..     876     889 ..     861     903 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 6e-05
  zf-RING_UBOX  15 pCGHtFCreCl..w 26 
                   pC+H F+++C+  +
    KHJ32577.1 876 PCQHAFHSDCIgkK 889
                   8**********641 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.7   9.7e-05       0.1       2      32 ..     859     888 ..     858     898 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 9.7e-05
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreCler 32 
                 +C  C  +l s ++  + pC+H fh +C+ +
  KHJ32577.1 859 KCYTCGLPLLS-RQFFVFPCQHAFHSDCIGK 888
                 68888667755.4444458*********944 PP

>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   9.2e-05     0.097      40      89 ..     806     855 ..     799     859 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 9.2e-05
  Syntaxin-6_N  40 detrteLrkalrsiewdledLeetvriveknpskfkidekelsrrrafve 89 
                   d+ ++e+ +al++ + d++ L++ ++  +k  +k +id ++l+rr a+ve
    KHJ32577.1 806 DDFKDEICTALEDYSRDIDSLKKEIDESSKTATKIRIDIATLDRRYAIVE 855
                   67899****************************************99987 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   0.00021      0.22      35      79 ..     860     904 ..     852     912 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00021
                 -TTCSTTTTTS-EEEBTTS-EEEHHHHHHHHHHHSTSSB-TTTSS CS
  zf-ANAPC11  35 cpsckfpGddcplvlGkckhnfhlhcilkwletetskglcpmcrq 79 
                 c +c +p     + +  c+h+fh  ci k + ++++ ++  m r+
  KHJ32577.1 860 CYTCGLPLLSRQFFVFPCQHAFHSDCIGKKVLEDATTSKSRMIRE 904
                 88888888888888999**********999888887777888774 PP

>> Vps39_2  Vacuolar sorting protein 39 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00026      0.28      16     107 ..     795     886 ..     781     888 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00026
     Vps39_2  16 vLdllPdelplkdlesflekalrnslekkreeqvvkklrkaeklsveeellklrskkvvvteekvCavCkkrlgesvfvvyPngsvvHlgCa 107
                  + + P+ + + d ++ ++ al++ +++    +     + ++ ++++ + ++l  +  +v+  ++C  C   l ++ f v+P ++  H+ C+
  KHJ32577.1 795 LIPFFPEFVVIDDFKDEICTALEDYSRDIDSLKKEIDESSKTATKIRIDIATLDRRYAIVEPGEKCYTCGLPLLSRQFFVFPCQHAFHSDCI 886
                 5566677777777777777777777776665555445555566677778889999999*********************************7 PP

>> Nre_C  Archaeal Nre, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00036      0.38      26      64 ..     552     590 ..     546     614 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00036
       Nre_C  26 aLekikrqakvivlreitpeYwaPvGvWqvReavrkale 64 
                  +++ +r+ + + + ++ ++Y+  +G W  Re+ ++al+
  KHJ32577.1 552 IISSHGREEELLFFASAINDYNFVLGYWMQREKWKEALN 590
                 57788999999**************************98 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.7   0.00036      0.38      13      28 ..     873     888 ..     859     899 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00036
                 .E-TTS--B-CHHHHH CS
    zf-C3HC4  13 elleCkHsfCskCirk 28 
                  + +C+H+f+s+Ci k
  KHJ32577.1 873 FVFPCQHAFHSDCIGK 888
                 678***********76 PP

>> zf-C3H2C3  Zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.3       9.1   9.6e+03      16      21 ..     718     723 ..     717     724 .. 0.90
   2 ?   12.3   2.2   0.00012      0.13       1      26 [.     860     887 ..     860     890 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 9.1
   zf-C3H2C3  16 sCkHlv 21 
                 sC H++
  KHJ32577.1 718 SCVHIY 723
                 8***98 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00012
   zf-C3H2C3   1 CdnCglkL.dypfvaysCkHlvHakC.a 26 
                 C  Cgl+L    f  + C+H +H +C +
  KHJ32577.1 860 CYTCGLPLlSRQFFVFPCQHAFHSDCiG 887
                 889**9853789**************44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (961 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.73u 0.28s 00:00:01.01 Elapsed: 00:00:00.44
# Mc/sec: 6524.42
//
Query:       KHJ32578.1  [L=944]
Description: putative ste ste11 protein kinase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-69  234.2   0.0    5.7e-69  232.4   0.0    1.8  2  Pkinase         Protein kinase domain
    3.3e-49  167.5   0.0    5.5e-49  166.8   0.0    1.3  1  Pkinase_Tyr     Protein tyrosine kinase
    4.4e-28   97.5   0.0    8.2e-28   96.7   0.0    1.5  1  Ras_bdg_2       Ras-binding domain of Byr2
    1.4e-16   60.7   0.0    3.1e-16   59.5   0.0    1.7  1  SAM_1           SAM domain (Sterile alpha motif)
    4.4e-14   52.4   0.1    1.1e-13   51.1   0.1    1.8  1  SAM_2           SAM domain (Sterile alpha motif)
    1.8e-10   41.3   0.0    3.3e-10   40.4   0.0    1.5  1  RA              Ras association (RalGDS/AF-6) domain
    3.4e-08   33.1   0.0    1.2e-05   24.8   0.0    2.3  2  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.035   14.1   0.0      0.072   13.1   0.0    1.5  1  SAM_PNT         Sterile alpha motif (SAM)/Pointed domain
      0.043   13.8   0.0      0.096   12.7   0.0    1.5  1  SAM_4           SAM domain (Sterile alpha motif)
      0.057   12.2   0.5       0.24   10.1   0.0    2.1  2  Pkinase_fungal  Fungal protein kinase
       0.18   12.1   0.6       0.39   11.0   0.6    1.6  1  SAM_Ste50p      Ste50p, sterile alpha motif


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.68   1.1e+03      58     111 ..     284     336 ..     275     337 .. 0.82
   2 !  232.4   0.0   3.5e-72   5.7e-69       3     264 .]     672     940 ..     670     940 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.68
                 TTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHH CS
     Pkinase  58 pnivrlyevfeekdelylvleyveggeladllerkgslseeeakkiakqilegl 111
                 + i+r++++   ++++  v ++++++e++++  rk  + e++ ++++  +l gl
  KHJ32578.1 284 SDIIRVISSGGASKTFR-VADCASCDEVMRMTLRKFGYREDHDRNYCFYVLDGL 336
                 56888888877666665.9999*********999999*************9998 PP

  == domain 2  score: 232.4 bits;  conditional E-value: 3.5e-72
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.........HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHH CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkke.........kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerk 92 
                 k   +G+GsfG+Vy a+++ tg+  AvK++++ +   ++          +++ rEi++l+ l+hpniv+++++ +++d+l ++leyv+gg+++++l+  
  KHJ32578.1 672 KGALIGQGSFGSVYLALHAVTGELLAVKQVETPSPGANSAsdsrkksmiDALKREISLLRDLQHPNIVQYLGASSSSDYLNIFLEYVPGGSVQTMLNSY 770
                 5678**************************98766555444556668889999********************************************** PP

                 SS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.........BCTTTSCGGGS-HHHHTTSCBSHHHHHHH CS
     Pkinase  93 gslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.........ltsfvgtseYlAPEvlkeneyskkvDvWs 182
                 g+l e  ++++++qi++gl+ylH ++iiHrD+K +NiL+d+kg +Ki+DFG++k++e ++            s  g+  ++APEv+k+++y++k+D+Ws
  KHJ32578.1 771 GALREPLVRNFVRQIVTGLAYLHGREIIHRDIKGANILVDNKGGIKISDFGISKKMEATNLlggagnsknRPSLQGSVFWMAPEVVKQTSYTRKADIWS 869
                 **********************************************************99899****999999************************** PP

                 HHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 183 lGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 lG++++e++tgk+pf+          ++ ql++i+ki g  k + + +s+ s+ea+ +lk+ ++ +++kR++aeell +p+l
  KHJ32578.1 870 LGCLIVEMMTGKHPFP----------DCSQLQAIFKIGGA-KASPAIPSHASSEAQTFLKQAFEIEHTKRPSAEELLFSPFL 940
                 ****************..........8999999***9876.8999999*****************************99986 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.8   0.0   3.4e-52   5.5e-49       5     255 ..     674     934 ..     671     937 .. 0.88

  Alignments for each domain:
  == domain 1  score: 166.8 bits;  conditional E-value: 3.4e-52
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST..........TSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHH CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlke..........eateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfL 92 
                    +G+G+fG+V+ +        + +  avK+++           + +++  ++l +e++++++l+hpniv++lg+ ++++ l i +eyv+gG+++++L
   KHJ32578.1 674 ALIGQGSFGSVYLALHA----VTGELLAVKQVETpspgansasdSRKKSMIDALKREISLLRDLQHPNIVQYLGASSSSDYLNIFLEYVPGGSVQTML 767
                  579***********988....67778888888533333332221333333567778****************************************** PP

                  HHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE......EETTSSTSGGGGS-HHHHHHSEEEH CS
  Pkinase_Tyr  93 rkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey......vkkeeaklpvkWmapEslkekkfts 184
                  ++    +l+   + +f+ q+  G++yL+ ++++Hrd+   N+L++++  +kisDfG+++++e ++        +++ + + +v WmapE++k++++t 
   KHJ32578.1 768 NSY--GALREPLVRNFVRQIVTGLAYLHGREIIHRDIKGANILVDNKGGIKISDFGISKKMEATNLLggagnsKNRPSLQGSVFWMAPEVVKQTSYTR 863
                  *98..9*******************************************************777655555544666777899**************** PP

                  HHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 185 ksDvWsfGvllwEiftlgespypglkneevlekl.kegkrlekpekcpeelyelmkkcweedpeeRptfsel 255
                  k+D+Ws G l+ E++t g++p+p++++ +++ k+  ++   + p+++++e ++++k+ +e + ++Rp+ +el
   KHJ32578.1 864 KADIWSLGCLIVEMMT-GKHPFPDCSQLQAIFKIgGAKASPAIPSHASSEAQTFLKQAFEIEHTKRPSAEEL 934
                  ****************.********999999999778888999*************************9987 PP

>> Ras_bdg_2  Ras-binding domain of Byr2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.7   0.0     5e-31   8.2e-28       2      99 ..     287     387 ..     286     388 .. 0.98

  Alignments for each domain:
  == domain 1  score: 96.7 bits;  conditional E-value: 5e-31
   Ras_bdg_2   2 vkfiledgstkkvnvsgcfnaeeikrkvlkklglkekeveeydvyvlss..nekeslrlLsdvELvtichspdrleknrlilvk.kneePtekalevsk 97 
                 +++i+++g++k+  v++c++++e++r +l+k+g++e+++++y++yvl++  ++++++r+Ls+ EL++i+++++r+e+nrlil+k +++eP +++l++++
  KHJ32578.1 287 IRVISSGGASKTFRVADCASCDEVMRMTLRKFGYREDHDRNYCFYVLDGldPDPSKCRRLSESELWRIIKDSKRSERNRLILRKiHQGEPGDAELQRAA 385
                 89***********************************************99***********************************************9 PP

   Ras_bdg_2  98 ki 99 
                 +i
  KHJ32578.1 386 AI 387
                 98 PP

>> SAM_1  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.5   0.0   1.9e-19   3.1e-16       2      64 .]      63     125 ..      62     125 .. 0.98

  Alignments for each domain:
  == domain 1  score: 59.5 bits;  conditional E-value: 1.9e-19
                 CTTHSSHHHHHHHTTSGGGHHHHHTTTSSHHHHTTSCHHHHHHCTTTSHHHHHHHHHHHHHHH CS
       SAM_1   2 kwsvedVgeWLesiglgqYadlFrageidgdaLlllteddLeklgvtllGHrkkIlyaIqrLk 64 
                 +w+ e V+eWL+  ++g+Y++lFr++ i+g  Ll++++ +L+++g+t++G+r +++  I++L+
  KHJ32578.1  63 NWDEEKVCEWLKNVNCGEYESLFRKNNINGPNLLEMDKVVLQEMGITKIGDRVRLYLNIKKLR 125
                 7***********************************************************996 PP

>> SAM_2  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.1   0.1   6.7e-17   1.1e-13       2      65 ..      62     124 ..      61     125 .. 0.96

  Alignments for each domain:
  == domain 1  score: 51.1 bits;  conditional E-value: 6.7e-17
                 GGHHHHHHHHHHHHTTTGGGHHHHHHTTCSHHHHHTTSCHHHHHHTTHHHHHHHHHHHHHHHHH CS
       SAM_2   2 eswsledvaeWLrsiglkqytdnFrdagitgaelllrlteedLkrlGitsvghrkkilkkiqel 65 
                 ++w+ e v+eWL+++++++y+  Fr+++i g   ll++++  L+++Git+ g+r ++   i++l
  KHJ32578.1  62 KNWDEEKVCEWLKNVNCGEYESLFRKNNING-PNLLEMDKVVLQEMGITKIGDRVRLYLNIKKL 124
                 79*****************************.9999******************9999999987 PP

>> RA  Ras association (RalGDS/AF-6) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   0.0   2.1e-13   3.3e-10       3      90 ..     285     370 ..     283     373 .. 0.95

  Alignments for each domain:
  == domain 1  score: 40.4 bits;  conditional E-value: 2.1e-13
                 CEEEEEETTT-TT..EEEEEEETTSBHHHHHHHHHHHCT-.GGGGCCEEEE...CCCTTTTEEEEE-TTSBCHHHHCCC-TTTSTCEEEEEE CS
          RA   3 gvlkVytedlkpgttyksikvsststaqeViealLekfgl.edspedyvLv...eskerggeerkLdddecplqiqlqwkkreeslrFvLre 90 
                  +++V+ + ++    +k+ +v  + +++eV++++L+kfg+ ed+ ++y+ +     + + +++r+L+++e +  i+   +++  ++r++Lr+
  KHJ32578.1 285 DIIRVISSGGA----SKTFRVADCASCDEVMRMTLRKFGYrEDHDRNYCFYvldGLDPDPSKCRRLSESELWRIIKDSKRSE--RNRLILRK 370
                 6899***9999....************************************99999********************999886..*******8 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0047       7.6      14      57 ..     670     713 ..     665     740 .. 0.76
   2 !   24.8   0.0   7.2e-09   1.2e-05     152     251 ..     784     885 ..     769     896 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0047
  Kinase-like  14 lvrgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdle 57 
                   ++g l+++g ++ v+++    tge lavk+  +ps  ++++ +
   KHJ32578.1 670 WMKGALIGQGSFGSVYLALHAVTGELLAVKQVETPSPGANSASD 713
                  67999****************************99944443333 PP

  == domain 2  score: 24.8 bits;  conditional E-value: 7.2e-09
  Kinase-like 152 qlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlsevekgfaPpEllgsrgg..ytrknktkmthkldaWqlGlviyriwclk 247
                  q++   a+L+ + ++h +++  n+l d+kgg+++ +f+   +  +   l    ++ + p l gs      +  ++t +t k d W lG  i  +   k
   KHJ32578.1 784 QIVTGLAYLHGREIIHRDIKGANILVDNKGGIKISDFGISKKMEATNLLGGAGNSKNRPSLQGSVFWmaPEVVKQTSYTRKADIWSLGCLIVEMMTGK 881
                  5666689********************************99999999999999***********65533445689*******************9999 PP

  Kinase-like 248 lPlt 251
                   P+ 
   KHJ32578.1 882 HPFP 885
                  9985 PP

>> SAM_PNT  Sterile alpha motif (SAM)/Pointed domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   4.4e-05     0.072      15      81 ..      59     125 ..      54     128 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.4e-05
                 SSGGG--HHHHHHHHHHHHHHTT-SS-HGGGCTS-HHHHHHS-HHHHHHHSCHCCHH..HHHHHHHHHH CS
     SAM_PNT  15 adPqeWtkehVlewlewavkefdlakidfsefdmsGkeLcsltkeefleaapllaGd..iLyehLqnlr 81 
                 +  ++W++e+V+ewl+ + +  + +++ f + +++G +L+++ k  ++e+  ++ Gd   Ly ++++lr
  KHJ32578.1  59 ESTKNWDEEKVCEWLKNV-NCGEYESL-FRKNNINGPNLLEMDKVVLQEMGITKIGDrvRLYLNIKKLR 125
                 56689**********954.44444555.66669***********9999987777776334777777776 PP

>> SAM_4  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   5.9e-05     0.096      27      66 ..      80     119 ..      74     132 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 5.9e-05
       SAM_4  27 nyavsfvdnriqknmlldlskeimnelgitvvgdiiailk 66 
                 +y   f  n i+   ll+++k +++e+git +gd + +  
  KHJ32578.1  80 EYESLFRKNNINGPNLLEMDKVVLQEMGITKIGDRVRLYL 119
                 57888999**************************887655 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.9      0.59   9.6e+02     237     237 ..     212     212 ..     108     270 .. 0.56
   2 ?   10.1   0.0   0.00015      0.24     312     396 ..     782     866 ..     766     871 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.59
  Pkinase_fungal 237 r 237
                     r
      KHJ32578.1 212 R 212
                     1 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00015
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesga......rertGTleFmaievlkgeeHsyrhD 396
                     +r+ ++g+  L+   +i+HrDi   Nil+      ++    ++D+ + k+++ ++   ga          G + +ma ev+k+++ +   D
      KHJ32578.1 782 VRQIVTGLAYLH-GREIIHRDIKGANILVD-----NKGGIKISDFGISKKMEATNLLGGAgnsknrPSLQGSVFWMAPEVVKQTSYTRKAD 866
                     688999******.***************99.....45556678888888887654433333333336678888888888888666665555 PP

>> SAM_Ste50p  Ste50p, sterile alpha motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.6   0.00024      0.39       2      71 ..      60     125 ..      59     128 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00024
                 XTTT--HHHHHHHHHHHHSS-TTSCHHHHHHHTT--CCCHHHHHHHHHHHCTTS-HHHHHHHHHHHHHHH CS
  SAM_Ste50p   2 dfdkWstdevvkkvkaeLgleetdplilriRenditGsvLseltLqDCkeLcdddlkkaiklkllinklv 71 
                  +++W  + v+++ k  ++  e ++l+   R n+i+G  L e+     +e+    + + ++l l i kl+
  KHJ32578.1  60 STKNWDEEKVCEWLKN-VNCGEYESLF---RKNNINGPNLLEMDKVVLQEMGITKIGDRVRLYLNIKKLR 125
                 6899*********996.5888999997...89***********999999*************99999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (944 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       672  (0.0374812); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 6556.89
//
Query:       KHJ32579.1  [L=198]
Description: putative related to heatshock protein hsp150 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.20s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1568.64
//
Query:       KHJ32580.1  [L=488]
Description: putative iq calmodulin-binding domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-26   90.7   0.4      5e-26   90.7   0.4    3.2  3  SAS4      Something about silencing, SAS, complex subunit 4


Domain annotation for each model (and alignments):
>> SAS4  Something about silencing, SAS, complex subunit 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.4     0.076   1.4e+03      59      79 ..      53      73 ..      21      79 .. 0.63
   2 !   90.7   0.4   2.8e-30     5e-26       1      97 [.     245     339 ..     245     341 .. 0.97
   3 ?   -0.3   0.5     0.066   1.2e+03       2      27 ..     456     481 ..     455     485 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.076
        SAS4 59 indpkdkkelerkreltikei 79
                i   k+++ + rkr+ ++ e+
  KHJ32580.1 53 IPTLKEESTVSRKRTKLKAEL 73
                334455666666666666665 PP

  == domain 2  score: 90.7 bits;  conditional E-value: 2.8e-30
        SAS4   1 DpLsDklYekaHkrmerqEkrmrniekeraesEadrlerllekLqgqdwlrvlgkitkindpkdkkelerkreltikeieallekferwkkeekklk 97 
                 D L ++++++ Hkr  r Ek++rn+++era+++  +++rlle L+g+dwlr lg  + + + ++k+e+e++r+++i+ +e++l+kf+ w+++ek+ k
  KHJ32580.1 245 DILCESYFKSLHKRPYRAEKTIRNTDRERAQHDRVQVTRLLEGLRGHDWLRLLGVHG-VPE-SKKREYESARQYFIRGCESILAKFQAWRDKEKRQK 339
                 7899*****************************************************.999.9*******************************987 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.066
        SAS4   2 pLsDklYekaHkrmerqEkrmrniek 27 
                    D+ +++aH r++r  +r+++ e 
  KHJ32580.1 456 EFWDERFLRAHARKKRLVERVKKHEN 481
                 566999*******9998888877775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (488 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1156  (0.0644765); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3673.64
//
Query:       KHJ32581.1  [L=614]
Description: putative heat shock protein ssb [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.7e-227  754.4   5.1   7.5e-227  754.3   5.1    1.0  1  HSP70     Hsp70 protein
    2.1e-16   59.7   0.1    1.6e-15   56.8   0.0    2.0  2  MreB_Mbl  MreB/Mbl protein
    0.00012   21.9   0.0    0.00028   20.7   0.0    1.5  1  FGGY_C    FGGY family of carbohydrate kinases, C-terminal dom
  ------ inclusion threshold ------
       0.18   12.2   0.1         20    5.6   0.0    2.6  2  DUF1894   Domain of unknown function (DUF1894)
        3.9    8.0   8.0       0.43   11.1   3.2    1.8  2  MRC1      MRC1-like domain


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  754.3   5.1  2.1e-230  7.5e-227       1     594 [.       9     611 ..       9     614 .] 0.97

  Alignments for each domain:
  == domain 1  score: 754.3 bits;  conditional E-value: 2.1e-230
                 EEEEEEXSSEEEEEEEETTEEEEEXXTTSXSSEESEEEEXTTSEEETHHHHHCTTTTGGGEEEXGGGTTTXBTTSHHHHHHHTTXSSEEEEETTSBEEE CS
       HSP70   1 viGiDLGttnsvvavmeggkievianeegnrttPsvvaFtkkerlvGeaAkrqavtnpkntvfsvKrliGrkfsdpevqkeikelpykvvkkengkavv 99 
                 +iGiDLGtt+s+va  eg+++e+iane+gn ttPs+++Ft+kerl+G+aAk+qa++np+nt+f++KrliGr+f+dp+v+k+i+++p+kv    +g+++v
  KHJ32581.1   9 AIGIDLGTTYSCVATYEGTNVEIIANEQGNYTTPSFISFTDKERLIGDAAKNQAAMNPRNTIFDIKRLIGRRFDDPTVKKDIESWPFKVIDR-DGSPMV 106
                 59***************************************************************************************999.9***** PP

                 EEEETTE..EEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCCSS..SCEEEEEEEEX CS
       HSP70 100 eveaage..kftpeqisamvLkklketaeaylgkkvtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldkkd..kernvlvyDlG 194
                 eve+ +e   f+p++is+mvL+k+ke ae  lgkkvt+avitvPaYfnd+qRqatkdAg+iAGLnvlRi+NepTAaa+aYGl   +  kernvl+yDlG
  KHJ32581.1 107 EVEYLKEtkVFSPQEISSMVLAKMKEVAEVKLGKKVTKAVITVPAYFNDNQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLGAGKssKERNVLIYDLG 205
                 ****998889************************************************************************866555*********** PP

                 SSXEEEEEEEEETTEEEEEEEEEETTXSHHHHHHHHHHHHHHHHHHHHSXXGGGSHHHHHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTTEEEEEEE CS
       HSP70 195 ggtfdvSilelekGvfevkaTagDthlGGedfDealvehlveefkkkegidlskdkkalqrlkeaaekaKkeLSsskqteinleietvdedgkdlsekl 293
                 ggtfdvS+l+++ Gvf vkaTagDthlGG+dfD++l+eh+++ef +k++ dls d++al+rl++a+e+aK++LS+   +++nlei+++++ g d+++++
  KHJ32581.1 206 GGTFDVSLLNIQGGVFTVKATAGDTHLGGQDFDTNLLEHFRKEFLRKHKKDLSGDPRALRRLRTACERAKRTLST--GAQTNLEIDSLFD-GIDFNTQI 301
                 ***************************************************************************..78999*******9.******** PP

                 EHHHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTT.CHHBSSSHTTTHHHHHHHHHHHHHCTC...GCSHCCEEEE CS
       HSP70 294 sRakfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfg.kepsktvnpDeavaiGAAvqagvlsge...eevkdllllD 388
                 +Ra+feel+++ ++ tl+pv ++lkda+l+k  +de+vlvGGstRiP++q+l++++f+ k++++++npDeava+GAAvqag+lsg+    ++ dllllD
  KHJ32581.1 302 TRARFEELNSKAFNGTLDPVAQVLKDANLDKTRVDEIVLVGGSTRIPRIQKLLSDFFDgKKLERSINPDEAVAYGAAVQAGILSGKatsADTADLLLLD 400
                 *********************************************************88**************************97778999****** PP

                 BESS-EEEEETTTEEEEEESTTCBSSEEEEEEEEESSTTSSSEEEEEEESSSSBGGGSEEEEEEEEECESSCSTTCSEEEEEEEEETTSCEEEEEEETT CS
       HSP70 389 vtpLslgietlggvmtkliernttiptkksqvfstaadnqtaveievlqgerelvkdnkllgsfeldgippaprGvpqieVtfdidanGiltvsakdke 487
                 v+pLslg+ ++g+++  + +r +t+pt k+++f+t+adnq++v+  v+qger   +dn++lg+f+l  ipp+++G   +eV f++d+nGil+v+a++k+
  KHJ32581.1 401 VVPLSLGVAMEGNIFAPVVPRGQTVPTIKKRTFTTVADNQQTVQFPVFQGERVNCEDNTSLGEFTLAPIPPMKAGDAILEVVFEVDVNGILKVTATEKT 499
                 *************************************************************************************************** PP

                 TCCEEEEEEECCSS.SBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..GGGSTHHHHHHHHHHHHHHHCHTTSSC..HHHHHH CS
       HSP70 488 tgkeeeitieaseg.lseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslekkleee..aekvseaekekvesaieeLkeeleeee..keeiea 581
                 +g++++iti++s g ls++eie+mv+dae+++++d++  ++ ea++++e+++ ++e+ l++   + k+++ +k+++es++++  ++le e+  ++++++
  KHJ32581.1 500 SGRSANITISNSVGkLSSSEIESMVNDAEKFKNSDEAFSKKFEARQQLESYISRVEEILSDPtmSLKLKRGNKDRIESSLSDAMAQLEIEDstSDDLKK 598
                 ************999*********************************************997777888899988888887777766544444899999 PP

                 HHHHHHHHHHHHH CS
       HSP70 582 kteelkkvvekia 594
                 k  +lk++v+k +
  KHJ32581.1 599 KELALKRAVTKAM 611
                 9999999998876 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0     0.061   2.2e+02       3      17 ..       9      23 ..       7      66 .. 0.77
   2 !   56.8   0.0   4.4e-19   1.6e-15      72     316 ..     120     378 ..      96     385 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.061
                EEEEEE-SSEEEEEE CS
    MreB_Mbl  3 dlgiDLGtantlvyv 17
                 +giDLGt+   v +
  KHJ32581.1  9 AIGIDLGTTYSCVAT 23
                69*******998844 PP

  == domain 2  score: 56.8 bits;  conditional E-value: 4.4e-19
                 HHHHHHHHHHHHHHHT.SS-SS--EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT--TTSS...S-EEEEEE-SS-EEEEEEETTE CS
    MreB_Mbl  72 evaeellkyfikkvkk.kkslskprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglpveep...sgnmvvdiGggttevavislgg 166
                 + +++++   +k+v++ k   + ++ vi+vP   ++ +r+A k+a   aG +   +i+ep aAAi  gl   ++   +  ++ d+Gggt +v+++ ++g
  KHJ32581.1 120 QEISSMVLAKMKEVAEvKLGKKVTKAVITVPAYFNDNQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLGAGKSskeRNVLIYDLGGGTFDVSLLNIQG 218
                 4555666666777766355567789****************************************888877554111567999************9976 PP

                 EE.EEEE....ES-SHHHHHHHHHHHHHHHH......SEE--HHHHHHHHHHH-BSS--HHHH.EEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHH CS
    MreB_Mbl 167 iv.tsks....vrvaGdeldeaiikyirkky......nlliGertaekikieigsavkeeeee.kmeikGrdlvtglpkevevsseevrealkepvsai 253
                  v t k+     +++G+++d +++++ rk++      +l    r  ++++++   a+ + ++  +++++   l  g+  +++++ ++ +e  +++++  
  KHJ32581.1 219 GVfTVKAtagdTHLGGQDFDTNLLEHFRKEFlrkhkkDLSGDPRALRRLRTACERAKRTLSTGaQTNLEIDSLFDGIDFNTQITRARFEELNSKAFNGT 317
                 55133332222689**********999987633333223333456678888888887776655689999999*************************** PP

                 HHHHHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHHS.S-EEE-SSTTTHHHHHHH CS
    MreB_Mbl 254 veavkevLektppeLaadivdrgivltGGgallkgldkllseetg.lpvkvaedpltcvakGtg 316
                 ++ v++vL+++  +L +  vd+ ivl+GG++ +  ++klls+ ++  + + + +p ++va G++
  KHJ32581.1 318 LDPVAQVLKDA--NLDKTRVDE-IVLVGGSTRIPRIQKLLSDFFDgKKLERSINPDEAVAYGAA 378
                 ********986..576666765.9999***************9962568899999999999986 PP

>> FGGY_C  FGGY family of carbohydrate kinases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   7.9e-08   0.00028     132     196 ..     318     383 ..     300     384 .. 0.86

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 7.9e-08
      FGGY_C 132 alqlrailealekdsgkpldrlavdGGgskndllmqllAdilg.vpVerpkt.aeatalGaAilAav 196
                    ++++l+  + d +  +d+++++GG ++ + +++ll d +  +++er  + +ea+a GaA+ A++
  KHJ32581.1 318 LDPVAQVLKDANLD-KTRVDEIVLVGGSTRIPRIQKLLSDFFDgKKLERSINpDEAVAYGAAVQAGI 383
                 44566777777666.999************************88*****9999***********985 PP

>> DUF1894  Domain of unknown function (DUF1894)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0055        20      15      48 ..      44      78 ..      19      81 .. 0.85
   2 ?    3.7   0.1     0.022        78      16      46 ..     117     147 ..     107     151 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0055
                EEESSHHHHHHHHTTSEEEEES--EEESSS.---S CS
     DUF1894 15 easfkeceeyikkkakevyevepgykilgv.rliG 48
                 +sf++ e++i + ak+   ++p  +i+++ rliG
  KHJ32581.1 44 FISFTDKERLIGDAAKNQAAMNPRNTIFDIkRLIG 78
                579*************************9834666 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.022
                 EESSHHHHHHHHTTSEEEEES--EEESSS-- CS
     DUF1894  16 asfkeceeyikkkakevyevepgykilgvrl 46 
                  s++e + ++ +k+kev ev+ g+k+  + +
  KHJ32581.1 117 FSPQEISSMVLAKMKEVAEVKLGKKVTKAVI 147
                 578999*******************987655 PP

>> MRC1  MRC1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.2       2.1   7.4e+03      62      90 ..     248     276 ..     226     312 .. 0.59
   2 ?   11.1   3.2   0.00012      0.43      37     123 ..     517     599 ..     509     613 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2.1
        MRC1  62 kakeereeDdkevekllkdittGglRkrr 90 
                  + ++ ++D + + + l++  t   R +r
  KHJ32581.1 248 EFLRKHKKDLSGDPRALRRLRTACERAKR 276
                 33344444444444444444444444444 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00012
        MRC1  37 daeleeliDdesedeevdkdelaaekakeereeDdkevekllkdittGglRkrrrraggndl..dlsDsDdeeaelrrrkrrrrekkrk 123
                 + e+e++++d+++ ++ d++  +++ a+++ e   ++ve++l d t   l+ +r++  ++++  +lsD+    a+l+ + + +   k+k
  KHJ32581.1 517 SSEIESMVNDAEKFKNSDEAFSKKFEARQQLESYISRVEEILSDPTM-SLKLKRGN--KDRIesSLSDA---MAQLEIEDSTSDDLKKK 599
                 569*********9999****************************988.67768863..44551144433...22233333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (614 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 4077.72
//
Query:       KHJ32582.1  [L=689]
Description: putative bromodomain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.9e-30  103.8   3.0    3.9e-14   52.5   0.0    2.8  3  Bromodomain  Bromodomain
  ------ inclusion threshold ------
       0.11   12.6   0.2       0.29   11.2   0.2    1.7  1  EF1G         Elongation factor 1 gamma, conserved domain


Domain annotation for each model (and alignments):
>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.5   0.0   4.3e-18   3.9e-14      11      83 ..      57     129 ..      45     130 .. 0.93
   2 !   50.9   0.3   1.3e-17   1.2e-13      13      82 ..     242     319 ..     222     321 .. 0.83
   3 ?   -3.3   0.1       1.1   9.7e+03      28      44 ..     599     615 ..     597     617 .. 0.86

  Alignments for each domain:
  == domain 1  score: 52.5 bits;  conditional E-value: 4.3e-18
                  TTCGGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHHHH CS
  Bromodomain  11 hklaepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviyelae 83 
                  + +a  Fl  ++++ +p+yy+vik P+ L tI++kl++++++sla +e  +k+++ Na+++n  gs iye+ e
   KHJ32582.1  57 RLIATDFLTLPNKRLLPEYYQVIKMPIALDTIENKLKRGEIQSLAILEGYFKRMVLNAKEFNARGSLIYEDSE 129
                  458899**999***********************************************************976 PP

  == domain 2  score: 50.9 bits;  conditional E-value: 1.3e-17
                  CGGGGCSTT-GCCSTTHHHH.SS---HHHHHHHH........HTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHHH CS
  Bromodomain  13 laepFlepvdpeefpdyyavikkPldLstIkkkl........esnkYksladfeadlkllfsNarkyngegsviyela 82 
                  + epF+  ++++e++dyy+vi++Pl L  ++k +          +++k++a+fe+++  +++Na  yn+++s+i++la
   KHJ32582.1 242 AFEPFINLPSRKEYKDYYSVINYPLALRDLQKAVkgirsktpGVSEFKTWAAFEEEAAFIWKNAFQYNEDNSDIFKLA 319
                  557888888***********************66666667799*********************************98 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 1.1
                  THHHH.SS---HHHHHH CS
  Bromodomain  28 dyyavikkPldLstIkk 44 
                   yy  ik  + Ls++++
   KHJ32582.1 599 HYYLQIKPSIALSMMQR 615
                  688999999*****997 PP

>> EF1G  Elongation factor 1 gamma, conserved domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   3.2e-05      0.29      37      78 ..     291     332 ..     279     339 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.2e-05
        EF1G  37 wenfdkeeyslwkveYkyneeltktfmssnliggffqrlekl 78 
                 w  f++e   +wk  ++yne+++ +f+ +  ++ ff +  + 
  KHJ32582.1 291 WAAFEEEAAFIWKNAFQYNEDNSDIFKLALDLQKFFRKSLQK 332
                 999************************999999998776544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (689 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       939  (0.0523733); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4769.82
//
Query:       KHJ32583.1  [L=133]
Description: putative cyclin-dependent kinase regulatory subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-34  117.6   2.2    3.2e-34  117.0   2.2    1.3  1  CKS       Cyclin-dependent kinase regulatory subunit


Domain annotation for each model (and alignments):
>> CKS  Cyclin-dependent kinase regulatory subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.0   2.2   1.8e-38   3.2e-34       1      67 [.      48     123 ..      48     124 .. 0.95

  Alignments for each domain:
  == domain 1  score: 117.0 bits;  conditional E-value: 1.8e-38
         CKS   1 ieYSdkyeddeyeYRhViLpkellkkipks.........rlLsekewraLgIqqskgWehyeihkpephiLlfrrp 67 
                 i+YS++y+d+ yeYRhV Lpk++lk+ipk+         +lL e+ewraLgI+qs+gWehye+h+pephiLlf+rp
  KHJ32583.1  48 IHYSPRYSDNDYEYRHVQLPKNMLKQIPKEyhdsqkgtlKLLWEEEWRALGITQSLGWEHYEVHEPEPHILLFKRP 123
                 8****************************66667788889***********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1060.15
//
Query:       KHJ32584.1  [L=233]
Description: hypothetical protein EV44_g2451 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-05   24.6   0.0    0.00044   20.5   0.0    2.1  1  Thioredoxin_4  Thioredoxin
  ------ inclusion threshold ------
      0.058   13.4   0.0        0.1   12.6   0.0    1.4  1  Thg1           tRNAHis guanylyltransferase
        0.2   11.4   0.2       0.33   10.7   0.2    1.6  1  DSBA           DSBA-like thioredoxin domain


Domain annotation for each model (and alignments):
>> Thioredoxin_4  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   7.3e-08   0.00044      15      90 ..      28     108 ..      23     231 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 7.3e-08
                    EEEEEEE-TT-HHHHHHHHHHHHHHHHHHHTT.....SEEEEEEE-..---STTTHHHHHHHTT--TTHHHHHHHHHHHHT CS
  Thioredoxin_4  15 vtvieyedlrCphCakfeeeveklleeyidtG.....kvkfiirdfpldkekeslkaamaarcageespeaflaikallys 90 
                    +t+++y d+ Cp  a+++++++k l   ++t+     +++fi+r+ + + + +s+    aa +++  + ++f++++++ ys
     KHJ32584.1  28 HTLEIYLDYVCPFSARMFNTIYKQLIPKLETDarfagHLQFIFRQQIQPWHPSSTLVHEAAVAVLRIDGNKFWKFSEVPYS 108
                    799*************999988444444566555555***********99999**************999***99998776 PP

>> Thg1  tRNAHis guanylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.7e-05       0.1      13      40 ..      84     110 ..      72     132 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.7e-05
        Thg1  13 llpntlivvRiDGrgFhkfskkhkfekP 40 
                 + +  ++v+RiDG++F kfs+ + ++ P
  KHJ32584.1  84 VHEAAVAVLRIDGNKFWKFSE-VPYSIP 110
                 5667789*************9.344444 PP

>> DSBA  DSBA-like thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.2   5.5e-05      0.33       1      22 [.      29      50 ..      29     170 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 5.5e-05
                EEEEEEBTTBHHHHHHHHHHHH CS
        DSBA  1 tvdeffDvlCPyCylgkerlek 22
                t++++ D++CP++  ++  + k
  KHJ32584.1 29 TLEIYLDYVCPFSARMFNTIYK 50
                689**********998876644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       451  (0.0251548); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 1868.60
//
Query:       KHJ32585.1  [L=588]
Description: putative endoplasmic oxidoreductin-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.4e-124  415.9   0.1   2.1e-124  415.3   0.1    1.2  1  ERO1      Endoplasmic Reticulum Oxidoreductin 1 (ERO1)


Domain annotation for each model (and alignments):
>> ERO1  Endoplasmic Reticulum Oxidoreductin 1 (ERO1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  415.3   0.1  1.1e-128  2.1e-124       2     354 .]      63     463 ..      62     463 .. 0.89

  Alignments for each domain:
  == domain 1  score: 415.3 bits;  conditional E-value: 1.1e-128
        ERO1   2 lrplLkeLvk.tdfFryfkvnld.keCpfweddeglCanraCavee.ceeeeiPekwraeelsklertls..................eeeesavkeak 79 
                 lr++L ++++ tdfF+y+++ l+ k+Cpfw+dd+g+C+n aCav++ ++ee+iP  wra+el+kle +++                             
  KHJ32585.1  63 LRDILVDITRnTDFFSYYRLILFgKDCPFWNDDNGVCGNIACAVNTlDNEEQIPPIWRAKELGKLEGPMAihpskqiqkkrnlqrpldG---------- 151
                 67789999988***********************************888999*****************97776666666666655531.......... PP

        ERO1  80 eeeeaeee................dyceledeeeee.avyvdLlenperfTgYkGesaervWkaiYeencfkeeseseese.................. 143
                        +                +yc  e+e++    +yv+L++nperfTgY+Ge ++++W+aiY+encf+ +  s   e                  
  KHJ32585.1 152 -------RlgdnvrescviedderNYCISEEENTGLrEDYVSLVDNPERFTGYAGEGTKQIWDAIYRENCFSGTPLSFL-Etlnpqqrvaanelgrvfr 242
                 .......0222222333333333389988888777679*********************************76544333.2477888888999****** PP

        ERO1 144 .................ekeleelclekrvfyrliSGlhasisihlaaeylnqetgewepnlelfkervgkhperlenlYfnyalvlrAvaklapylee 225
                                  +   e+ clekrvfyr+iSG+h+sis+h+++eylnq+tgew+pnl+++k+r++ +++r+ nlYfn+a++l+A   l pyl+e
  KHJ32585.1 243 dqgqqknqkqnlfqishSVGFEDGCLEKRVFYRIISGMHSSISAHICYEYLNQTTGEWSPNLQCYKDRLHGYTDRIGNLYFNFAILLQATRNLGPYLKE 341
                 ***************999999****************************************************************************** PP

        ERO1 226 lefstgeeeedeetkellkeelakellsalsskekafdesklfkdkeeaeelkeefrerfrnisrimdCVgCekCrLwGKlqttGlgtAlkilfeeeek 324
                 ++f++++++++  t+++    + ++l++++ss++k fd+s +f  + e ++lke+fr+rfrn+s+imdCVgC+kCrLwGKlq++G+gtAlk+lfe+e++
  KHJ32585.1 342 YTFCSHDTSQNLITNDK----V-QSLINTISSAPKFFDQSLMFV-NGEGPSLKEDFRKRFRNVSSIMDCVGCDKCRLWGKLQIAGYGTALKVLFESENN 434
                 *****999999988887....5.67778888999**********.89*************************************************986 PP

        ERO1 325 eeekklkLernevvALintlerlseSieav 354
                 + ++  kL+r+e+vAL+ntl+r+s+Si++v
  KHJ32585.1 435 S-KDVPKLKRTEIVALFNTLARVSSSIDTV 463
                 5.67999********************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       608  (0.0339115); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.38
# Mc/sec: 4629.13
//
Query:       KHJ32586.1  [L=625]
Description: putative signal recognition particle protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-19   70.1  11.5    1.6e-18   66.8   2.7    3.6  3  SRP_TPR_like  Putative TPR-like repeat
    4.2e-11   43.1   9.9    1.1e-10   41.7   9.9    1.7  1  SRP72         SRP72 RNA-binding domain
    1.1e-05   25.8  10.2       0.24   12.0   0.5    4.9  5  TPR_19        Tetratricopeptide repeat
    0.00011   21.7   0.2    0.00044   19.8   0.2    2.0  1  GGA_N-GAT     GGA N-GAT domain
     0.0027   17.7   0.2     0.0087   16.0   0.0    1.9  2  Cutinase      Cutinase
     0.0057   16.7  13.1       0.43   10.8   0.4    5.7  6  TPR_2         Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.078   13.2  14.8        2.5    8.4   1.8    4.7  5  ANAPC3        Anaphase-promoting complex, cyclosome, subunit 
       0.12   12.7   9.7         11    6.4   0.1    4.6  4  TPR_12        Tetratricopeptide repeat
       0.66   10.0   2.7       0.98    9.5   0.1    2.6  2  TPR_3         Tetratricopeptide repeat
        4.4    8.4  10.1         81    4.4   0.1    5.4  6  TPR_14        Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> SRP_TPR_like  Putative TPR-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.8   2.7   9.1e-22   1.6e-18      20     117 .]      44     149 ..      19     149 .. 0.88
   2 ?    5.1   0.5     0.013        22       6      74 ..     161     249 ..     156     270 .. 0.74
   3 ?    2.0   0.0      0.11     2e+02       5      34 ..     288     317 ..     285     348 .. 0.79

  Alignments for each domain:
  == domain 1  score: 66.8 bits;  conditional E-value: 9.1e-22
  SRP_TPR_like  20 kvvaliklekyeeaLkllkkgs.alsedvrfEkaYvlYklkkykkalkilkkveaeekvkvlksqvlYrlgsyekA...YklL.....skekkedel 107
                    vval+kl+++++aL +l+  + +ls  ++ E+aY+lYk+ k+ +a  +l+ +++  ++k++++qv+Yr++++  A   Y+ L       e ++++l
    KHJ32586.1  44 IVVALLKLDRFKDALDALSRVDqKLSALCTLEEAYALYKTGKLSEAEALLQVTNKR-GLKHVAAQVAYRAEKFIAAlseYRNLrseksIIEGEDNDL 139
                   59****************998768***********************999988877.*******************999999965553335689*** PP

  SRP_TPR_like 108 vvNllAvdsl 117
                    vN+ A+d++
    KHJ32586.1 140 MVNISAIDAQ 149
                   *******985 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.013
  SRP_TPR_like   6 ekilrlegkelkkf.....kvvaliklekyeeaLkllkkgs.............alse..dvrfEkaYvlYklkkykkalkilkkveae 74 
                   e+i +l +  l+ f      +  +i    ++ a  +l+k+              + se   +   +aYv+ kl k   a ++l+ ++ +
    KHJ32586.1 161 EEINKLTSGALNIFeisynNACKYIAHKDFKTACDYLEKARelceasdemneieKKSEilPIMLQQAYVFTKLGKHDVAKNLLNLININ 249
                   67777777777777666766667777777888888888777788888877777644442246899***********9999999876654 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.11
  SRP_TPR_like   5 yekilrlegkelkkfkvvaliklekyeeaL 34 
                   ++++   ++++l++ +++a ik++ky    
    KHJ32586.1 288 FDQLFWYQTNILERNRIIADIKAQKYLGVA 317
                   566666788999**************6554 PP

>> SRP72  SRP72 RNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   9.9   6.4e-14   1.1e-10       8      58 .]     550     597 ..     542     597 .. 0.70

  Alignments for each domain:
  == domain 1  score: 41.7 bits;  conditional E-value: 6.4e-14
       SRP72   8 seetatsekgkkkkrkkkrkRkvklPKnydpgvtpDPERWLPrreRSsYrk 58 
                 ++ + ++ek  +k   k++  k ++PKny++g++ DPERWL +++RS Yr+
  KHJ32586.1 550 NKGNMDEEKLPAK---KRKLSKKRMPKNYEEGKKVDPERWLAKKDRSDYRP 597
                 3333333333333...444456667*************************7 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.5   0.00013      0.24       7      52 ..      20      65 ..      19      70 .. 0.93
   2 !    7.0   0.3    0.0046       8.2      32      50 ..      77      95 ..      66     107 .. 0.88
   3 ?   -0.6   0.1       1.1     2e+03       6      20 ..     189     203 ..     184     249 .. 0.43
   4 ?   -2.6   0.0       4.7   8.5e+03      13      41 ..     362     386 ..     356     394 .. 0.71
   5 !    9.2   0.1   0.00098       1.8       4      42 ..     469     508 ..     463     509 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00013
      TPR_19  7 yaeAlalleqalqedpknaearllLAeallalgqldeAealLdalp 52
                 +eAl+  ++al  +  n +a+   + all+l ++++A ++L+++ 
  KHJ32586.1 20 NEEALDVARKALLSSKYNVDALHTIVVALLKLDRFKDALDALSRVD 65
                579***************************************9975 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0046
      TPR_19 32 AeallalgqldeAealLda 50
                A al+++g l eAealL+ 
  KHJ32586.1 77 AYALYKTGKLSEAEALLQV 95
                899**************86 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 1.1
      TPR_19   6 dyaeAlalleqalqe 20 
                 d+  A ++le+a + 
  KHJ32586.1 189 DFKTACDYLEKAREL 203
                 555555555555432 PP

  == domain 4  score: -2.6 bits;  conditional E-value: 4.7
      TPR_19  13 lleqalqedpknaearllLAeallalgql 41 
                 lle    + p++  + l  +++++  + +
  KHJ32586.1 362 LLE----KRPNDVGLILTVVQLCVLINKP 386
                 444....4999999999988888766655 PP

  == domain 5  score: 9.2 bits;  conditional E-value: 0.00098
      TPR_19   4 egdyaeAlalleqalqedpknaearllL.Aeallalgqld 42 
                 + d+ +A +l++++  ++p++  a++++ A ++ ++++l+
  KHJ32586.1 469 SDDLSAANELFKSMRHKKPDDKIALAGYiASCQSESNELA 508
                 56999***************999999888*******9985 PP

>> GGA_N-GAT  GGA N-GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.2   2.5e-07   0.00044      12      32 ..     462     482 ..     460     486 .. 0.95

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 2.5e-07
   GGA_N-GAT  12 rLLkSknpeDLqaANrLIKsm 32 
                  LL+S++ +DL aAN L Ksm
  KHJ32586.1 462 SLLQSQDSDDLSAANELFKSM 482
                 59******************9 PP

>> Cutinase  Cutinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       2.7   4.9e+03     132     148 ..     193     209 ..     177     217 .. 0.80
   2 !   16.0   0.0   4.9e-06    0.0087      33      91 ..     444     501 ..     431     531 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2.7
                 TTS-GGGEEEE--TT-G CS
    Cutinase 132 sklyaskikslCdagDp 148
                 ++ y +k  +lC+a+D 
  KHJ32586.1 193 ACDYLEKARELCEASDE 209
                 45688999999999996 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 4.9e-06
                 H.TTT-EEEEE------CGGSTTSS-HHHHHHHHHHHHHHHHH-TT-EEEEEEETHHHH CS
    Cutinase  33 avgsksvavqgvnYpAdleqlyegseeagakeaaalvqslaskCPdtkivlgGYSqGaq 91 
                 +  +++  v+++ Y A+l+ l++ ++++  ++a++l++s+ +k Pd ki+l GY   +q
  KHJ32586.1 444 YWCQRNKPVNSMLYAACLS-LLQSQDSDDLSAANELFKSMRHKKPDDKIALAGYIASCQ 501
                 5555667778778*****9.599*******************************77666 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1      0.87   1.6e+03      17      28 ..      20      31 ..      19      35 .. 0.87
   2 ?    3.0   0.0     0.075   1.3e+02      10      26 ..      47      63 ..      40      64 .. 0.90
   3 !    5.8   0.2    0.0093        17       7      25 ..      76      94 ..      72      94 .. 0.89
   4 ?   -0.8   0.2       1.3   2.3e+03       8      25 ..     106     123 ..     103     127 .. 0.87
   5 !   10.8   0.4   0.00024      0.43       3      32 ..     176     205 ..     174     207 .. 0.90
   6 ?   -0.9   0.0       1.4   2.5e+03       6      24 ..     225     243 ..     222     244 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.87
       TPR_2 17 yeeAleafekAl 28
                 eeAl+  +kAl
  KHJ32586.1 20 NEEALDVARKAL 31
                59*********9 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.075
       TPR_2 10 ayyklgdyeeAleafek 26
                a++kl+++++Al+a+ +
  KHJ32586.1 47 ALLKLDRFKDALDALSR 63
                899**********9876 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0093
       TPR_2  7 lGlayyklgdyeeAleafe 25
                 ++a+yk g++ eA+++++
  KHJ32586.1 76 EAYALYKTGKLSEAEALLQ 94
                699***********99875 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 1.3
       TPR_2   8 GlayyklgdyeeAleafe 25 
                 ++++y++ ++  Al  ++
  KHJ32586.1 106 AQVAYRAEKFIAALSEYR 123
                 8999*********99998 PP

  == domain 5  score: 10.8 bits;  conditional E-value: 0.00024
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldP 32 
                 + yn ++ y++ +d++ A +++ekA el++
  KHJ32586.1 176 ISYNNACKYIAHKDFKTACDYLEKARELCE 205
                 5689999********************985 PP

  == domain 6  score: -0.9 bits;  conditional E-value: 1.4
       TPR_2   6 nlGlayyklgdyeeAleaf 24 
                 +++++  klg+++ A++++
  KHJ32586.1 225 QQAYVFTKLGKHDVAKNLL 243
                 5789999******999875 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.1     0.002       3.6      40      81 ..      21      63 ..      19      64 .. 0.82
   2 ?    8.4   1.8    0.0014       2.5      25      73 ..      70     116 ..      63     125 .. 0.76
   3 ?    1.8   0.1      0.16   2.9e+02      33      52 ..     184     204 ..     177     213 .. 0.79
   4 ?    1.5   0.2      0.19   3.5e+02      38      52 ..     189     204 ..     186     262 .. 0.55
   5 ?   -0.7   0.1      0.93   1.7e+03      20      34 ..     448     462 ..     439     485 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.002
                HHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3 40 krAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81
                ++A++++rka  + + +  ++ ++  +llkL+++++A++aL++
  KHJ32586.1 21 EEALDVARKAlLSSKYNVDALHTIVVALLKLDRFKDALDALSR 63
                57999999996666667788888889999**********9986 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0014
                 HHHHH..HHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT-HH CS
      ANAPC3  25 dayll..AlclylngqykrAyellrkaklnskslgcrylfAqcllkLkkye 73 
                 ++  l  A++ly++g+  +A  ll+ +    +  g   ++Aq+++  +k+ 
  KHJ32586.1  70 ALCTLeeAYALYKTGKLSEAEALLQVT----NKRGLKHVAAQVAYRAEKFI 116
                 5555556********************....55556678888888777765 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.16
                 HHHTT-HHHHHHHHHCT.SHH CS
      ANAPC3  33 lylngqykrAyellrka.kln 52 
                 +   +++k+A+++l+ka +l 
  KHJ32586.1 184 YIAHKDFKTACDYLEKArELC 204
                 566799**********95544 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.19
                 -HHHHHHHHHCT.SHH CS
      ANAPC3  38 qykrAyellrka.kln 52 
                 ++k+A+++l+ka +l 
  KHJ32586.1 189 DFKTACDYLEKArELC 204
                 5555555555552222 PP

  == domain 5  score: -0.7 bits;  conditional E-value: 0.93
                 H--HHHHHHHHHHHH CS
      ANAPC3  20 tespedayllAlcly 34 
                 ++ p +++l+A cl 
  KHJ32586.1 448 RNKPVNSMLYAACLS 462
                 455566666666654 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1     0.006        11      27      70 ..      21      63 ..      17      64 .. 0.85
   2 ?    6.0   0.7    0.0081        14      24      69 ..      52      94 ..      51      96 .. 0.83
   3 ?   -2.5   0.0       3.5   6.3e+03      52      68 ..     106     122 ..     103     140 .. 0.63
   4 ?    5.3   0.2     0.014        24      17      36 ..     188     207 ..     184     245 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.006
      TPR_12 27 ekaleiarrllGpdhpltattlrnLgrlyralgryeeAlellee 70
                e+al++ar++l   + + + +l+++  ++++l+r+++Al++l +
  KHJ32586.1 21 EEALDVARKALLSSK-YNVDALHTIVVALLKLDRFKDALDALSR 63
                7999***88865544.589********************99865 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0081
      TPR_12 24 ellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelle 69
                + ++ al++ +r+  +++ l a +    + +++++g++ eA++ll+
  KHJ32586.1 52 DRFKDALDALSRV--DQK-LSALCTLEEAYALYKTGKLSEAEALLQ 94
                5688899999999..777.77888888888999*********9997 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 3.5
      TPR_12  52 grlyralgryeeAlell 68 
                 +++ ++++++ +Al+ +
  KHJ32586.1 106 AQVAYRAEKFIAALSEY 122
                 45555555555555433 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.014
      TPR_12  17 grydeAlellekaleiarrl 36 
                 +++  A+++leka+e+++++
  KHJ32586.1 188 KDFKTACDYLEKARELCEAS 207
                 57788999999999998876 PP

>> TPR_3  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1   0.00054      0.98       8      30 ..      77      97 ..      68      98 .. 0.87
   2 ?   -1.6   0.3       1.6   2.8e+03       8      23 ..     181     196 ..     177     198 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00054
                HHHHHHTT-HHHHHHH..HHHHH CS
       TPR_3  8 AaefynkkkyqeArelfsYalla 30
                A+++y  +k++eA+ l++  +++
  KHJ32586.1 77 AYALYKTGKLSEAEALLQ--VTN 97
                9*****************..887 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.6
                 HHHHHHTT-HHHHHHH CS
       TPR_3   8 AaefynkkkyqeArel 23 
                 A+ +   k++ +A+++
  KHJ32586.1 181 ACKYIAHKDFKTACDY 196
                 67777789999***99 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       7.2   1.3e+04      17      28 ..      20      31 ..      18      34 .. 0.84
   2 ?    4.4   0.1     0.045        81       2      28 ..      39      65 ..      38      70 .. 0.85
   3 ?    1.3   0.2      0.46   8.3e+02       7      25 ..      76      94 ..      70     110 .. 0.86
   4 ?    3.5   0.0      0.09   1.6e+02      12      36 ..     185     209 ..     184     212 .. 0.84
   5 ?   -0.1   0.0       1.3   2.3e+03       5      25 ..     224     244 ..     222     246 .. 0.88
   6 ?   -2.6   0.0       8.5   1.5e+04      14      36 ..     469     491 ..     456     497 .. 0.60

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 7.2
      TPR_14 17 pdeAiallrral 28
                 +eA++++r+al
  KHJ32586.1 20 NEEALDVARKAL 31
                589999999987 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.045
      TPR_14  2 eallalaeallalGdpdeAiallrral 28
                +al  ++ all l+++++A+++l r+ 
  KHJ32586.1 39 DALHTIVVALLKLDRFKDALDALSRVD 65
                577778889**************9985 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.46
      TPR_14  7 laeallalGdpdeAiallr 25
                 a al+  G++ eA+all+
  KHJ32586.1 76 EAYALYKTGKLSEAEALLQ 94
                5889999*********997 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.09
      TPR_14  12 lalGdpdeAiallrralalaPddae 36 
                  a  d+++A ++l++a +l+ +++e
  KHJ32586.1 185 IAHKDFKTACDYLEKARELCEASDE 209
                 56689*************9998876 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 1.3
      TPR_14   5 lalaeallalGdpdeAiallr 25 
                 l+ a ++  lG++d A +ll+
  KHJ32586.1 224 LQQAYVFTKLGKHDVAKNLLN 244
                 678999**********99986 PP

  == domain 6  score: -2.6 bits;  conditional E-value: 8.5
      TPR_14  14 lGdpdeAiallrralalaPddae 36 
                 ++d+ +A +l++ +  + Pdd  
  KHJ32586.1 469 SDDLSAANELFKSMRHKKPDDKI 491
                 34566677777777767777755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (625 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       879  (0.0490267); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.62u 0.24s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4411.21
//
Query:       KHJ32587.1  [L=257]
Description: putative pre-rrna-processing protein pno1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-07   29.3   0.0    1.4e-06   28.3   0.0    1.5  1  KH_8      Krr1 KH1 domain
     0.0089   15.8   0.6      0.021   14.6   0.6    1.6  1  KH_1      KH domain


Domain annotation for each model (and alignments):
>> KH_8  Krr1 KH1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.0   1.6e-10   1.4e-06       5      79 ..      83     158 ..      80     160 .. 0.93

  Alignments for each domain:
  == domain 1  score: 28.3 bits;  conditional E-value: 1.6e-10
        KH_8   5 vlfpkyrekylkeveekikkll.eekklklevdlkerslkvsTtekTrDPyiilkardlikLisrgvpleeakkvl 79 
                 v+ p +r + lk v++ki   l e+ kl++++++k++ ++++T ++T D   + k++d++k  s g +++ a  +l
  KHJ32587.1  83 VAIPPHRMTPLKAVWPKIYPPLvEHLKLQVRMNIKNKAVELRTSKHTMDLGALQKGEDFVKAFSLGFDVDDAIALL 158
                 78899*************98775889****************************************9999998665 PP

>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.6   2.4e-06     0.021       9      65 ..     183     231 ..     179     232 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.4e-06
                 GHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT...T.-EEEEEESHHHHHHHHHHHH CS
        KH_1   9 slvgriIGkgGsnIkeIreetgakIkvpksedegsderevtisGspeavekAkelie 65 
                 + +gri Gk G++   I++ + +++++  +       + ++i G  ++++ A+e+i 
  KHJ32587.1 183 RAIGRIAGKDGKTKFAIENASRTRVVLA-D-------SKIHILGGFKNIHIAREAIV 231
                 679****************99*****65.3.......47*****9999******995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       373  (0.0208043); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1913.82
//
Query:       KHJ32588.1  [L=232]
Description: putative heat shock protein 30 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-20   72.3   0.4    3.3e-15   56.1   0.2    2.3  2  HSP20       Hsp20/alpha crystallin family
    4.8e-06   26.0   0.0    3.9e-05   23.1   0.0    2.2  1  ArsA_HSP20  HSP20-like domain found in ArsA


Domain annotation for each model (and alignments):
>> HSP20  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   3.8e-06     0.034       1      39 [.      81     120 ..      81     141 .. 0.78
   2 !   56.1   0.2   3.7e-19   3.3e-15      40     102 .]     171     230 ..     158     230 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 3.8e-06
                 E--SSEEEEEEEEE-TT--CCCEEEEEETTE.EEEEEE-- CS
       HSP20   1 dikeeeeefevkldvpglkkeelkvkvednr.vlvkgehe 39 
                 d+ke  +++e+  ++pg+++++++++ +d + ++++g+  
  KHJ32588.1  81 DVKEVSDSYELYGELPGIDQKDIDIEFTDSStITISGHTV 120
                 6788999*********************998567766554 PP

  == domain 2  score: 56.1 bits;  conditional E-value: 3.7e-19
                 ..---TT----SS---EEEEEE--STTB-TTT-EEEEETTEEEEEEEBSS--..--------- CS
       HSP20  40 eeeedekglikerssrkFsrkftLPenvdadkvkaslkdGvLtvtvpkkepekkkkerkiqiq 102
                 +e++ ek++++ers+++Fsr+ft P  vd+++v+a++++G+L+v+vpk +++     rkiqiq
  KHJ32588.1 171 SEDSREKFWVMERSMGEFSRSFTFPIQVDEENVTATMNNGILRVKVPKAKKQ---AGRKIQIQ 230
                 68999*******************************************9998...89****97 PP

>> ArsA_HSP20  HSP20-like domain found in ArsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   4.3e-09   3.9e-05       2      62 ..      87     215 ..      86     216 .. 0.97

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 4.3e-09
  ArsA_HSP20   2 deyvlkldLPfvdkeeidlsrs.gdeLtIkig................................................................... 32 
                 d y+l  +LP++d+++id++ +  +++tI+                                                                     
  KHJ32588.1  87 DSYELYGELPGIDQKDIDIEFTdSSTITISGHtvrshtegqpprdlienksssdsdsvtaqdgntklsenpfekeektsdnqnisedsrekfwvmersm 185
                 6799999************977589************************************************************************** PP

  ArsA_HSP20  33 .nfrRqitLPsvlarkevtsAkfedgvLeIr 62 
                   f+R++t P  +++++v  A++++g L+++
  KHJ32588.1 186 gEFSRSFTFPIQVDEENV-TATMNNGILRVK 215
                 ******************.9*********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       707  (0.0394333); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1796.15
//
Query:       KHJ32589.1  [L=415]
Description: putative protein phosphatase methylesterase 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.3e-22   80.2   0.0    4.8e-22   79.6   0.0    1.1  1  Abhydrolase_6  Alpha/beta hydrolase family
    6.7e-08   32.1   0.0      1e-07   31.5   0.0    1.3  1  Hydrolase_4    Serine aminopeptidase, S33
      3e-07   30.3   0.2    2.2e-06   27.5   0.2    2.1  1  Abhydrolase_1  alpha/beta hydrolase fold
     0.0018   18.4   0.1     0.0058   16.8   0.0    1.9  2  Thioesterase   Thioesterase domain
  ------ inclusion threshold ------
      0.036   13.9   0.0       0.07   12.9   0.0    1.4  1  Abhydrolase_5  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.6   0.0   1.3e-25   4.8e-22       1     218 [.     134     384 ..     134     385 .. 0.64

  Alignments for each domain:
  == domain 1  score: 79.6 bits;  conditional E-value: 1.3e-25
                    EEEE--GC.....GC..HHHHHHHHCCT.CEEEEE--TTST....S-GGCS--HHH..C.HHHHHHHCCTT.......TTSEEEEEETCHHHHHHH CS
  Abhydrolase_6   1 vlllHGagssassWl..vapLaallaag.vhvlapDlpGhG....rsdpppldled..l.adlaalldelaa.....gggpvvlvGHSlGGalala 81 
                    +++ HGagss+ s++  + +++++l++  +  l++D++GhG    +++p   dl+   l +dl+ ++d  ++       +p vlvGHSlGGa+ + 
     KHJ32589.1 134 FVMHHGAGSSGLSFAqlAIEIRKKLPSAgI--LSIDARGHGltkiSPTPVVIDLSLdiLsEDLLLIIDQTRKkfmwkEIPPLVLVGHSLGGAVITN 227
                    5899**********5234466777777768..*********55554444444443322123334444444448888778888************** PP

                    HHHCC...............EEEEES-.....----TTTS----TTHHHHHHTT-CCCCH...CCH.........S-HSCCCCHHH...CCCCHCH CS
  Abhydrolase_6  82 aapla.............lvvgvlldp...pptalpagllaaalelllallallrllawl...sre.........plprlfladed...adaawra 146
                     a+++             +v+g ++d+   +        +  +++ +  +++l  + +w+   +           ++p  +l+d +   +  +wr+
     KHJ32589.1 228 IAKSTrldgnllcfavidVVEGSAIDAlksM--------QTYLFSRPSNFNSLDSAIEWHihsR-TirnpksaqvSVP-ALLKDIAdssYSWSWRT 313
                    7778865565555555544444555552220........2222222222222222244443320.1223334443233.333333323336***** PP

                    CCCGHHHHCCHHCHTTCCHHTT-TTGCEEE.CTT-CHHHHCHHCCCHSTTEEETCE...SSS-HHHHSHHHHH CS
  Abhydrolase_6 147 rlarlaallaglgllpaaawadlpvpllvl.ggeDplvprllerllaqagarlpvvlpgaGHlphleepdeva 218
                     la+ ++++ +++      +   +++ l+l +g+D+l  +l+   ++  ++ l +++p aGH++h++ p++va
     KHJ32589.1 314 DLAATQPFWESWFSGMSKKFLEGRASKLLLlAGTDRLDTELMIGQMQ-GKFAL-QIFPEAGHFIHEDLPERVA 384
                    *************8877777777777755559*******99777776.*****.****************998 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   2.9e-11     1e-07       7     108 ..     134     241 ..     128     284 .. 0.82

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 2.9e-11
  Hydrolase_4   7 vvlvHGlaehsgryaelaeaLaaq..GfavyalDhrGhGrse..gkrghvp.sfddyvdDlaafvekvkeehpel...plfllGhSmGGliallyllr 96 
                   v+ HG +++   +a+la +  ++     ++ +D+rGhG ++  +  + ++ s+d + +Dl  ++++ +++   +   pl+l+GhS+GG++ +++++ 
   KHJ32589.1 134 FVMHHGAGSSGLSFAQLAIEIRKKlpSAGILSIDARGHGLTKisPTPVVIDlSLDILSEDLLLIIDQTRKKFMWKeipPLVLVGHSLGGAVITNIAKS 231
                  6788999999999999998887643378899***********9977777765899999************99999999****************9976 PP

  Hydrolase_4  97 ypdkvaglilsa 108
                   +   +g  l+ 
   KHJ32589.1 232 TRL--DGNLLCF 241
                  654..5555555 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.2   6.1e-10   2.2e-06       1     255 [.     132     378 ..     132     380 .. 0.78

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 6.1e-10
                    SEEEEE-STTTCGGGGTTGHHHHHHHHT..TSEEEEEEETTSTTSSSTTTGB.CHHSHHHHHHHHHHH....HHHC...TTSSEEEEEETHHHHHH CS
  Abhydrolase_1   1 pvlvilhGlpgssdvwaerglapaLakd..gfdvillDlrGvgySspapacinddygtasvaddldri....ldal...gddkltlvGhSmGGmia 87 
                    p++v++hG + s+ ++a+  la  + k+   + ++ +D rG+g ++ +p++++ d +++ + +dl  i    + ++    + +l+lvGhS+GG++ 
     KHJ32589.1 132 PLFVMHHGAGSSGLSFAQ--LAIEIRKKlpSAGILSIDARGHGLTKISPTPVVIDLSLDILSEDLLLIidqtRKKFmwkEIPPLVLVGHSLGGAVI 225
                    689***************..******************************99988888889999997723334444222356889*********** PP

                    HHHHHHH..GGGEEEEEEESECSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHCHHHCCHHHHHHHCHHH CS
  Abhydrolase_1  88 layaaey..perVkalvllgaidpaaslieaqrqqaksfpdffdgyaadcarnpagplladelaaleqrhrlvdalkfpdkskrfpssgsdnassl 181
                    ++ a     + +  +++ ++        +  +  ++ks+++++      +    ++  +  ++++++ + +++ +   ++  + ++ss+s+   ++
     KHJ32589.1 226 TNIAKSTrlDGNLLCFAVIDV------VEGSAIDALKSMQTYLFSRPSNFNSLDSAIEWHIHSRTIRNPKSAQVSVP-ALLKDIADSSYSWSWRTD 314
                    *****9888888888888888......66666667777777777777777777777777777777777777665552.444444455666666777 PP

                    HHHHHHHHHHHHHCCHHHHHHHHHCTHHHHSEEEEEEETTCSSSCHHHHHHHHHCHTSEEEEEEETCSSSHHHH CS
  Abhydrolase_1 182 atgalksieqwpttdsaklllrlrelknvlaptlvisgtsDplvppkaledlaqllpkkrlvvisdagHlafle 255
                     +  + ++e+w    s k+l  + +      + l++ + +D+l+++ ++ ++++++      +++ agH+++ +
     KHJ32589.1 315 LAATQPFWESWFSGMSKKFLEGRAS------KLLLL-AGTDRLDTELMIGQMQGKFAL---QIFPEAGHFIHED 378
                    7777799*****9999888877666......66665.669*************99766...9*******99875 PP

>> Thioesterase  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   1.6e-06    0.0058       2      80 ..     132     225 ..     131     237 .. 0.81
   2 ?   -3.8   0.1       3.1   1.1e+04     166     200 ..     290     327 ..     274     331 .. 0.57

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.6e-06
                   EEEEE--TTC.CSGGGHHHHHHCTTC..EEEEEEECSTTST....SHHHCTT..CHHHHHHHHHHHHHHH-S.....SS.SEEEEEETHHHHHH CS
  Thioesterase   2 pLflfppagG.sasvfrslasklsdp..vvevlavqlpgre....rdepple..sieelaaeyaealrqiqp.....eg.PyalfGhSlGgllA 80 
                   pLf+++++ G s  +f++la +++++   + +l + ++g++    +++p +   s++ l + ++ ++ q+ +     e  P++l+GhSlGg++ 
    KHJ32589.1 132 PLFVMHHGAGsSGLSFAQLAIEIRKKlpSAGILSIDARGHGltkiSPTPVVIdlSLDILSEDLLLIIDQTRKkfmwkEIpPLVLVGHSLGGAVI 225
                   89********8889******9999998899************87777777762346788888888888886433332667***********985 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 3.1
                   SCSE.HHCEEEEEEGSS-C.TCCCCCCCHCH...CHCTCE CS
  Thioesterase 166 eaaq.klratlfngsddkl.kdldtlelaer...weqkts 200
                   +a q +++a l+++ d+ + +++ t +la++   we++ s
    KHJ32589.1 290 SA-QvSVPALLKDIADSSYsWSWRT-DLAATqpfWESWFS 327
                   33.2467777777777665233333.33333577777766 PP

>> Abhydrolase_5  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.9e-05      0.07      54      83 ..     208     236 ..     182     253 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.9e-05
  Abhydrolase_5  54 pklekfvvgGhslGGvvasrfaaeeekieg 83 
                    ++++ +v+ GhslGG+v++++a++    +g
     KHJ32589.1 208 KEIPPLVLVGHSLGGAVITNIAKSTRL-DG 236
                    356779***************987654.44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       788  (0.0439511); expected 358.6 (0.02)
Passed bias filter:                      571  (0.0318478); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.38
# Mc/sec: 3239.25
//
Query:       KHJ32590.1  [L=242]
Description: putative diacylglycerol acyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-82  276.2   0.0    2.6e-82  276.1   0.0    1.0  1  DAGAT     Diacylglycerol acyltransferase


Domain annotation for each model (and alignments):
>> DAGAT  Diacylglycerol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  276.1   0.0   1.5e-86   2.6e-82      61     295 ..       2     240 ..       1     242 [] 0.96

  Alignments for each domain:
  == domain 1  score: 276.1 bits;  conditional E-value: 1.5e-86
       DAGAT  61 tdrnYliGyhPhgilsvgafvalatdatgvkekfpgirfnlatLagqfrtpfrreillllGlievsresieyvLdk.....eekGravvlvvGGaeeal 154
                 ++r Y++GyhPhgi+s+gaf a++t+a +++  fpgi+  l tL ++fr+pf r++ l +Gl  vsres e +L+k     e+ Gra+ +vvGGa+e+l
  KHJ32590.1   2 PTRKYIFGYHPHGIISMGAFAAFCTEALDFSRLFPGIKNTLLTLDSNFRIPFYRDYALAMGLASVSRESCENLLSKgglnnEGMGRAITIVVGGARESL 100
                 689**********************************************************************98732222567*************** PP

       DAGAT 155 eahpgketltLkkrkGfvkialktGadLvPvysfGendvykqvenpkgsklrkvqeklkkvlglsppilyGrglfnsltlGllPfrkpittvvGkPiev 253
                 +a+pg+  ltLk rkGf+k+a++tGadLvPv  fGend+y+q+++ k  k+ ++q  +k +lg++ p+++ rg+fn + +G +P+rkp+++vvG+Pi v
  KHJ32590.1 101 DAQPGTMRLTLKARKGFIKLAIRTGADLVPVLGFGENDLYDQIHPVKYPKIHRLQLLFKAILGFTIPLFHARGIFN-YDVGWMPYRKPLNIVVGRPILV 198
                 ****************************************************************************.88******************** PP

       DAGAT 254 tkteePtkeeidelhakYveaLaeLfeehkekfgvskdtkLv 295
                  + ++P +eeid++h++Y+++L+ ++e +k+k   +++++L+
  KHJ32590.1 199 RQNLNPDTEEIDRVHKQYIQELERMWEAWKDKAAPNRKEELI 240
                 ********************************9988888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1859.00
//
Query:       KHJ32591.1  [L=734]
Description: putative mitochondrial distribution and morphology protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.2e-245  816.2   3.9   1.6e-245  815.7   3.9    1.2  1  MDM31_MDM32  Yeast mitochondrial distribution and morphology 
  ------ inclusion threshold ------
      0.021   14.5   0.1      0.021   14.5   0.1    2.1  3  RPEL         RPEL repeat


Domain annotation for each model (and alignments):
>> MDM31_MDM32  Yeast mitochondrial distribution and morphology (MDM) proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  815.7   3.9  1.8e-249  1.6e-245       1     525 []     210     729 ..     210     729 .. 0.94

  Alignments for each domain:
  == domain 1  score: 815.7 bits;  conditional E-value: 1.8e-249
  MDM31_MDM32   1 keelLaaangflsrlkirlkwllirsvrpfnaddisafvswlllgnvlwillgtTtfvslvillintvfaqetlakkigdyltkstgvkvvFEsaivp 98 
                  keelL+aa+gf+srlk+r+kw++irsvrp+n+dd+safvsw+++gn++wil+gtTtf+slvil+intv+aqetla++igdylt+s+g+kvvFEsa+vp
   KHJ32591.1 210 KEELLSAATGFWSRLKVRFKWFSIRSVRPWNVDDWSAFVSWFVVGNIVWILVGTTTFFSLVILSINTVVAQETLARWIGDYLTHSSGIKVVFESAVVP 307
                  89************************************************************************************************ PP

  MDM31_MDM32  99 kwkdgkisfknvfvsrrPkqkkskvekgsskeaaakaaaaaaaeekeseeeeeeeeddgnytqfdltidtvdvtLsfakwlngkGllkdvevkGvrGv 196
                  kwkdg+i+f+nvf+srrP+q k+kv+kgss +aaa+aaa++++     + ++++ee+d+nytqfdlti t++vtLsf+kw+ng+Gll+dvevkGvrGv
   KHJ32591.1 308 KWKDGVITFHNVFISRRPGQGKTKVRKGSSVNAAAEAAAERQN-----DIDNKKEEEDTNYTQFDLTIATINVTLSFVKWWNGRGLLRDVEVKGVRGV 400
                  ********************************99866655533.....233456789***************************************** PP

  MDM31_MDM32 197 vdrthvkwkeeeldpksyrhehqpgdfelesfkledvlvtvyqpegfrpfkvsifscdlpqLRkqwlfyDflsAnnvsGsfdnslFtiHkrqs..... 289
                  vdrt v++++e++dp+ y  + +pgdfe++sf+l+d+lvtvyqp+gfrpf v if cdlp+LRkqwlfyD+lsA+++sG++d+slFtiH++q      
   KHJ32591.1 401 VDRTFVTYSRERVDPQIYLRQRRPGDFEIDSFRLDDLLVTVYQPNGFRPFPVRIFFCDLPKLRKQWLFYDILSADHMSGAYDESLFTIHPHQIygfag 498
                  **********99*********************************************************************************77653 PP

  MDM31_MDM32 290 lekeeeekeeeaskwkklsrlridglnidhlnrgvegpfsWiteGkvdivaDimlPededelslskvlseildkleeevtskkaleeeekseelakea 387
                    k++e  + ++++wkk+srlridglnidhlnrgv gpf+Wi+eG++divaDi +P+d+de s+skv+s+++d++e++v++++++    +++e++ e+
   KHJ32591.1 499 F-KQDEMWDLDKNQWKKHSRLRIDGLNIDHLNRGVAGPFGWIYEGNIDIVADILFPADTDE-SISKVMSDFYDRMEATVNAHRNQV---HTNENTLET 591
                  2.22222333348***********************************************9.********************9544...344555567 PP

  MDM31_MDM32 388 ksaeeseeekeeeeekeeeeeekyvvvdlklklndvkAavPlftkdlsyvnnaliRpivayiNskrtyipikcrvvkklsdfdgswtvydsgLmddls 485
                   +a++s e+++++++ +++e+++++v++lkl+ln+vkAavPlft+dlsyvn++liRpivayiN++rt+ipi+cr+vk++sdf+gswt++dsgLmd+ls
   KHJ32591.1 592 IEAISSWESEKHTQKLKDKEDRRFLVMELKLHLNEVKAAVPLFTRDLSYVNQTLIRPIVAYINNRRTFIPISCRIVKDASDFNGSWTIFDSGLMDNLS 689
                  7778888888888999999******************************************************************************* PP

  MDM31_MDM32 486 aevYealakdvadeearkrrlkkvglWslqlavqalllgl 525
                  ae+Yea++kdv d++ar+rrlkk glWs++lavqal++gl
   KHJ32591.1 690 AETYEAFSKDVVDRQARMRRLKKLGLWSISLAVQALFMGL 729
                  **************************************97 PP

>> RPEL  RPEL repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0      0.86   7.7e+03      18      22 ..       4       8 ..       4       9 .. 0.87
   2 ?   14.5   0.1   2.3e-06     0.021       5      15 ..     203     213 ..     203     215 .. 0.94
   3 ?   -3.7   0.1       1.2   1.1e+04       6      10 ..     321     325 ..     321     326 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.86
        RPEL 18 rnILp 22
                ++IL+
  KHJ32591.1  4 KHILK 8 
                8***8 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 2.3e-06
        RPEL   5 KLshRPtreEL 15 
                 K+shRPt+eEL
  KHJ32591.1 203 KISHRPTKEEL 213
                 9*********9 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 1.2
        RPEL   6 LshRP 10 
                 +s+RP
  KHJ32591.1 321 ISRRP 325
                 89*** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (734 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       885  (0.0493614); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.41
# Mc/sec: 5387.98
//
Query:       KHJ32592.1  [L=388]
Description: putative zinc finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-06   27.4   3.7    2.9e-06   27.4   3.7    1.8  2  zf-H2C2_2  Zinc-finger double domain
     0.0068   16.3   1.1      0.014   15.3   1.1    1.5  1  zf-C2HC_2  zinc-finger of a C2HC-type
  ------ inclusion threshold ------
      0.037   14.0   0.0      0.094   12.7   0.0    1.7  1  zf-C2H2_6  C2H2-type zinc finger
      0.064   13.7   0.1      0.064   13.7   0.1    3.0  3  zf-C2H2    Zinc finger, C2H2 type
      0.086   13.5   4.2       0.12   13.0   0.9    2.4  2  SlyX       SlyX
       0.14   12.7   5.3       0.15   12.6   3.1    2.1  2  DUF16      Protein of unknown function DUF16
        0.2   12.6   0.1        0.2   12.6   0.1    3.0  3  zf-C2H2_4  C2H2-type zinc finger
       0.53   10.6   5.2        1.2    9.4   0.1    2.8  3  DUF2072    Zn-ribbon containing protein


Domain annotation for each model (and alignments):
>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   3.7   1.3e-09   2.9e-06       1      25 [.       8      32 ..       8      33 .. 0.95
   2 ?   -3.3   0.0       6.7   1.5e+04       1       6 [.      36      41 ..      36      42 .. 0.80

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 1.3e-09
   zf-H2C2_2  1 nLrrHirkHtgekpyeCplCdkaFk 25
                +L+rH++ Htge+p+ Cp+C+ +F+
  KHJ32592.1  8 DLKRHTKLHTGERPHICPKCKRKFA 32
                69**********************8 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 6.7
   zf-H2C2_2  1 nLrrHi 6 
                +L+rH 
  KHJ32592.1 36 ALVRHA 41
                69***6 PP

>> zf-C2HC_2  zinc-finger of a C2HC-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   1.1   6.2e-06     0.014       4      21 ..      23      41 ..      22      42 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 6.2e-06
   zf-C2HC_2  4 pCpkCgRsF.npdrlekHe 21
                 CpkC+R+F   d+l++H 
  KHJ32592.1 23 ICPKCKRKFaRGDALVRHA 41
                6********8889999996 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   4.2e-05     0.094       2      20 ..      22      40 ..      22      42 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4.2e-05
   zf-C2H2_6  2 heCsvCsksFpslqaLggH 20
                h+C+ C++ F  ++aL  H
  KHJ32592.1 22 HICPKCKRKFARGDALVRH 40
                9***************877 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   3.1     0.013        29       9      23 .]       2      16 ..       1      16 [. 0.93
   2 ?   13.7   0.1   2.9e-05     0.064       1      21 [.      22      42 ..      22      43 .. 0.92
   3 ?   -3.1   0.1       6.2   1.4e+04      16      22 ..     375     381 ..     374     381 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.013
                EESSHHHHHHHHHCC CS
     zf-C2H2  9 sFkrksnLkrHirtH 23
                +F+r ++LkrH + H
  KHJ32592.1  2 KFRRLHDLKRHTKLH 16
                7************99 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 2.9e-05
                EEETTTTEEESSHHHHHHHHH CS
     zf-C2H2  1 ykCpdCgksFkrksnLkrHir 21
                + Cp+C+++F r + L+rH +
  KHJ32592.1 22 HICPKCKRKFARGDALVRHAK 42
                67*****************75 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 6.2
                 HHHHHHC CS
     zf-C2H2  16 LkrHirt 22 
                 Lk+H++t
  KHJ32592.1 375 LKNHLNT 381
                 999*976 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.1      0.39   8.8e+02      32      57 ..     217     242 ..     213     249 .. 0.84
   2 ?   13.0   0.9   5.5e-05      0.12       6      53 ..     338     385 ..     335     387 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.39
                 HHHHHHHHHHHHHHT-XXXXXXXXXX CS
        SlyX  32 qidrlqrqlrllaerlkeleessgas 57 
                  idrl+   +  + +lk++e++++++
  KHJ32592.1 217 SIDRLRSPNQSSQSQLKNIEKQKSNQ 242
                 69999999999999**9999997654 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 5.5e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXX CS
        SlyX   6 eeLEiklafqedtieeLndvvaeqqqqidrlqrqlrllaerlkelees 53 
                 + LE+k+  + d iee+      qq++i  l +++ ll+++l+++ +s
  KHJ32592.1 338 QILEVKVRQLTDKIEEMKTNEKGQQEKINLLSKEILLLKNHLNTMTKS 385
                 569***************************************988765 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0         1   2.3e+03      55      71 ..     226     242 ..     209     281 .. 0.66
   2 ?   12.6   3.1   6.7e-05      0.15      49      97 ..     336     384 ..     306     385 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 1
                 HHHHHHHHHHHHHHHHH CS
       DUF16  55 qkvekqgekikelkveq 71 
                 q  + q ++i+++k +q
  KHJ32592.1 226 QSSQSQLKNIEKQKSNQ 242
                 33444444444444433 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 6.7e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHH CS
       DUF16  49 qinkleqkvekqgekikelkveqkaqgeelnkvdetleliletLqkink 97 
                  ++ le kv+++++ki+e+k + k q+e++n + + + l+ + L+++ k
  KHJ32592.1 336 YVQILEVKVRQLTDKIEEMKTNEKGQQEKINLLSKEILLLKNHLNTMTK 384
                 5778999**********************************99999987 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   1.7      0.44   9.9e+02       9      23 ..       2      16 ..       1      17 [. 0.88
   2 ?   12.6   0.1   9.1e-05       0.2       1      21 [.      22      42 ..      22      44 .. 0.93
   3 ?   -2.7   0.0       7.4   1.7e+04      16      22 ..     375     381 ..     370     382 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.44
   zf-C2H2_4  9 sFsskkaLlrHlkth 23
                 F++ ++L+rH k h
  KHJ32592.1  2 KFRRLHDLKRHTKLH 16
                599999*****9988 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 9.1e-05
   zf-C2H2_4  1 fkCpiCgksFsskkaLlrHlk 21
                ++Cp C++ F + +aL rH k
  KHJ32592.1 22 HICPKCKRKFARGDALVRHAK 42
                68*****************76 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 7.4
   zf-C2H2_4  16 LlrHlkt 22 
                 L++Hl+t
  KHJ32592.1 375 LKNHLNT 381
                 789*986 PP

>> DUF2072  Zn-ribbon containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   0.00054       1.2       1      66 [.      21      85 ..      21     122 .. 0.56
   2 ?   -1.5   0.0       1.2   2.7e+03      27      60 ..     206     238 ..     190     257 .. 0.44
   3 ?    2.6   0.3      0.07   1.6e+02      74     104 ..     323     367 ..     269     379 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00054
     DUF2072  1 PHkCtkCekvfedgskeil..kGCpsCGgkkFlyvkeeekkedvseekeelvaeaeeeieevldaeet 66
                PH C kC++ f  g++ ++  kG   C g++         ++d+++ ++    ++++++  ++ +++t
  KHJ32592.1 21 PHICPKCKRKFARGDALVRhaKGSGGCAGRRSSI-GSLGVEDDTEDLNT--LESNKGAVTGIIYNNST 85
                9***********9998775337888888887553.44444444444433..22222233333222222 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.2
     DUF2072  27 gkkFlyvkeeekkedvseekeelvaeaeeeieev 60 
                  + +++ +e + + d +++ +++ +++ ++ie+ 
  KHJ32592.1 206 LQSYQFSNEVS-SIDRLRSPNQSSQSQLKNIEKQ 238
                 44444422222.2222222222222222222222 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.07
     DUF2072  74 k.............ekekaekekeeedrvesvrilepGsYe.lNl 104
                 +              +  + k ++ +d++e ++  e+G+ e +Nl
  KHJ32592.1 323 DklfaegqeavwsyVQILEVKVRQLTDKIEEMKTNEKGQQEkINL 367
                 122222222334335666677788888888888888887664555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1309  (0.0730102); expected 358.6 (0.02)
Passed bias filter:                      589  (0.0328518); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2852.27
//
Query:       KHJ32593.1  [L=73]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       278  (0.0155056); expected 358.6 (0.02)
Passed bias filter:                      262  (0.0146132); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.26s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 544.84
//
Query:       KHJ32594.1  [L=554]
Description: putative helix-loop-helix dna-binding domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-12   46.1   2.1    2.4e-11   43.4   2.1    2.3  1  HLH              Helix-loop-helix DNA-binding domain
  ------ inclusion threshold ------
      0.045   13.4   0.3       0.64    9.7   0.3    2.4  2  Cation_ATPase_N  Cation transporter/ATPase, N-terminus
        5.8    7.0   7.7       0.92    9.6   0.5    2.8  2  DUF1199          Protein of unknown function (DUF1199)


Domain annotation for each model (and alignments):
>> HLH  Helix-loop-helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   2.1     4e-15   2.4e-11       1      47 [.     307     413 ..     307     418 .. 0.90

  Alignments for each domain:
  == domain 1  score: 43.4 bits;  conditional E-value: 4e-15
                 HHHHHHHHHHHHHHHHHHHHHHHHHCST............................................................CSTTSS-STHH CS
         HLH   1 rraahnerErrRRdriNsaleeLrellP............................................................slppskKlsKa 39 
                 rr++hn++ErrRRd+iN++++eL +l+P                                                              +++k ++K 
  KHJ32594.1 307 RRESHNLVERRRRDNINERIQELSRLVPmhrledekvrkalqnnsplspilagtsapplglsppqatsglagpgarraaagnittgipIEEKDKGPNKG 405
                 89***************************9999999999999999999999999999999999999999999999999999999999866788889999 PP

                 HHHHHHHH CS
         HLH  40 eiLekAve 47 
                 +iL  Av 
  KHJ32594.1 406 DILNGAVS 413
                 99998886 PP

>> Cation_ATPase_N  Cation transporter/ATPase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0     0.094   5.6e+02      17      35 ..      42      60 ..      33      60 .. 0.85
   2 ?    9.7   0.3   0.00011      0.64      13      44 ..     290     320 ..     284     328 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.094
  Cation_ATPase_N 17 lenGLtqaeaaerlkkyGp 35
                     ++nGLt++ +   +  yGp
       KHJ32594.1 42 DQNGLTNSFVSSFQNSYGP 60
                     69******99999999997 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00011
  Cation_ATPase_N  13 LetdlenGLtqaeaaerlkkyGpNelkekkkk 44 
                      L+ +  nGL ++e ++r+++   N ++ +++ 
       KHJ32594.1 290 LQ-TANNGLQSQEMKRRRRRESHNLVERRRRD 320
                      66.789*******************9777665 PP

>> DUF1199  Protein of unknown function (DUF1199)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.5   0.00015      0.92       2      36 ..      92     125 ..      91     128 .. 0.83
   2 ?   -0.6   1.6      0.23   1.4e+03       7      27 ..     514     533 ..     509     541 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00015
     DUF1199   2 lhRNsksVpasiyRsnniftnnqgSgSmETSTisS 36 
                 l RNs+ + ++ y s ni+ +n++S Sm     sS
  KHJ32594.1  92 LGRNSDTIDQFCYPS-NIYDHNNASLSMNNNIYSS 125
                 57******9977765.8***********8766555 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.23
     DUF1199   7 ksVpasiyRsnniftnnqgSg 27 
                 +s+ a ++ + ni+ n q S 
  KHJ32594.1 514 DSIQANLD-NSNIYWNGQNSA 533
                 45555444.789**9999884 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 4137.67
//
Query:       KHJ32595.1  [L=720]
Description: putative upf0171 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   9.5e-132  440.1   1.1   9.5e-132  440.1   1.1    2.6  3  NPR3         Nitrogen Permease regulator of amino acid transp


Domain annotation for each model (and alignments):
>> NPR3  Nitrogen Permease regulator of amino acid transport activity 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.8   2.2      0.89   1.6e+04     104     133 ..      54      83 ..      44      84 .. 0.58
   2 !  440.1   1.1  5.3e-136  9.5e-132       2     467 .]     135     541 ..     134     541 .. 0.90
   3 ?   -3.7   0.1      0.21   3.7e+03      82      82 ..     579     579 ..     553     656 .. 0.54

  Alignments for each domain:
  == domain 1  score: -5.8 bits;  conditional E-value: 0.89
        NPR3 104 eeeeededdeesek....eeeekedkkknltmFh 133
                 ++++++e d    +     +++++d++k l+ F+
  KHJ32595.1  54 DKNDKNEVD----RiefdFDDDDDDDEKMLHSFN 83 
                 222222333....144447888889999999997 PP

  == domain 2  score: 440.1 bits;  conditional E-value: 5.3e-136
        NPR3   2 fdseflaellsPerelcntrFeltvDdlaFlGlPvhvdedgkwrkskkkkkkskrkrssrskekkskesskksesssksesseekksskeseeseekes 100
                 f++++l+++l+P+r++ ++rFelt+D l+Fl++P+h++edg+w ++       krk++ +  +++ ++ s+++                      +ke+
  KHJ32595.1 135 FSTTDLENILTPSRAYRKSRFELTLDSLCFLSYPIHIREDGTWTRR-------KRKQKLKGGNSNAESLSSTT----------------------DKEK 204
                 899*******************************************.......66664422222211111111......................1111 PP

        NPR3 101 neeeeeeededdeesekeeeekedkkknltmFhlvfvlnPplseynsrvdemYenvvkklsaalkyeQaksdYVskEcekilklkekalkeskklkely 199
                        ++  d+    ++ ++e  +  +tmF++vf+l+ p+ +++++vdem+++vvkk+++al  +Qa s YV+ E+e il++keka++++++++ l+
  KHJ32595.1 205 G-----IRKIYDD----SNLSEEYYEGGMTMFNVVFILDVPRYDMKQKVDEMFDHVVKKFNLALMEAQASSGYVWFESELILAIKEKAREDRRPMSWLW 294
                 1.....1111121....233568899************************************************************************* PP

        NPR3 200 reilekSsLAraltelyesisknkiAslelnddvtislqiPiktefsklpnekeeavlpgsyltsilneseseedeeeeeekfLeknyaLLlLddekki 298
                 reil  S+LA+a++++++sis+nkiA+++l+  +++slqiP++  + +lp+ ke+a + g+  t+++   + +ed     ++ L+k++aLLlL++e+k+
  KHJ32595.1 295 REILLLSTLASAIRDIFHSISHNKIATVKLGSGLDLSLQIPVPSFLISLPTSKERA-MIGLLATNAIP--FVNEDG-DYGQPQLNKHFALLLLENETKL 389
                 ******************************************************98.99999999965..666654.456899**************** PP

        NPR3 299 ikelekssaeddeltvllaelvralkptlslaeyaslldedleeeqvsesnslelsqirslarhLiywRrArvIdplssrdvYivsPladlskleqasa 397
                 ++el   +a+++el+++l+e++  +kptls+a             q+++ ns+el+++  la+hLi +RrA++I+pl+s++vYivsP++dl+ l++as 
  KHJ32595.1 390 VAEL---QADKKELSAALIECISLCKPTLSFA-------------QTAQINSIELTSLLTLASHLIVYRRAIAIPPLHSQNVYIVSPNCDLRMLPEASL 472
                 ****...99***********************.............667789************************************************ PP

        NPR3 398 eFkekFpslPsLpkfLsaLSsskprpfssiipskehrelYleaLaWLlrkglvtqlltfarirvdkeikm 467
                  +k++Fp +PsL++fL+aLS ++prp+++++ps++hr++Y+e+LaWL+r+g+vtql+tf +i v++ei++
  KHJ32595.1 473 LWKKTFPFAPSLQSFLAALS-ASPRPYRTLVPSRDHRPTYMEMLAWLIRGGWVTQLRTFTWIQVWPEIQY 541
                 ********************.56*********************************************85 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 0.21
        NPR3  82 s 82 
                 s
  KHJ32595.1 579 S 579
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (720 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       650  (0.0362541); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 4933.26
//
Query:       KHJ32596.1  [L=112]
Description: putative cytochrome c oxidase assembly protein cox19 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.048   14.0   1.5       0.13   12.5   1.5    1.7  1  Pet191_N  Cytochrome c oxidase assembly protein PET191


Domain annotation for each model (and alignments):
>> Pet191_N  Cytochrome c oxidase assembly protein PET191
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.5   7.5e-06      0.13      30      56 ..      41      67 ..      28      75 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 7.5e-06
    Pet191_N 30 eClkekaeelpeeCkqlrkayfeCkrg 56
                 C+k+k+ + + eC+++ k+y  C+++
  KHJ32596.1 41 MCIKKKKGSNDLECRNIAKSYLGCRMD 67
                6*****9999***************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 831.27
//
Query:       KHJ32597.1  [L=1007]
Description: putative pro-apoptotic serine protease nma111 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-55  184.9   0.1    3.9e-35  119.7   0.0    2.6  2  PDZ_1          PDZ-like domain
    7.7e-26   91.8   1.1    2.1e-21   77.4   0.0    2.5  2  Trypsin_2      Trypsin-like peptidase domain
    3.8e-14   52.3   0.1    2.2e-05   24.2   0.1    3.8  3  PDZ_6          PDZ domain
      1e-13   51.4   2.8    0.00011   22.4   0.0    5.0  5  PDZ_2          PDZ domain
    5.8e-09   36.2   0.0     0.0045   17.3   0.0    4.3  4  PDZ            PDZ domain
    0.00014   21.7   0.0     0.0006   19.7   0.0    1.9  1  Trypsin        Trypsin
     0.0048   16.6   0.0      0.015   15.0   0.0    1.9  1  4HPAD_g_N      4-Hydroxyphenylacetate decarboxylase subunit g
     0.0084   16.1   0.7        1.9    8.5   0.2    3.8  4  Tricorn_PDZ    Tricorn protease PDZ domain
  ------ inclusion threshold ------
      0.088   11.4   0.0       0.17   10.5   0.0    1.4  1  Peptidase_S46  Peptidase S46
       0.27   10.7   0.1       0.43   10.1   0.1    1.3  1  DUF31          Putative peptidase (DUF31)


Domain annotation for each model (and alignments):
>> PDZ_1  PDZ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.7   0.0   2.2e-38   3.9e-35       1      78 []     383     459 ..     383     459 .. 0.98
   2 !   62.7   0.0   1.4e-20   2.4e-17       2      78 .]     858     935 ..     857     935 .. 0.96

  Alignments for each domain:
  == domain 1  score: 119.7 bits;  conditional E-value: 2.2e-38
       PDZ_1   1 aitpsrfvevaGatfhdLsyqlarsyaipvkgvyvseasgsfklsskekkgviitsinnqptpnLdefievvkkipdn 78 
                 +itp+rfv+v+G++fh+Lsyq+ar ya+++kgvyv+ea+gsf+++   ++g+ii+++++++tp+Ld fiev+k+ipd+
  KHJ32597.1 383 SITPDRFVSVSGGSFHNLSYQQARLYAVACKGVYVCEATGSFRFEH-MDSGWIIQTVDHKKTPDLDSFIEVMKNIPDR 459
                 69******************************************88.*****************************96 PP

  == domain 2  score: 62.7 bits;  conditional E-value: 1.4e-20
       PDZ_1   2 itpsrfvevaGatfhdLsyqlarsyaipvk..gvyvseasgsfklsskekkgviitsinnqptpnLdefievvkkipdn 78 
                 ++++r v+++Ga++h+ +++++r+   +++  +++ ++ +gs++++++ + ++++t++n++pt++ ++f++vv  ipdn
  KHJ32597.1 858 LETDRAVNFCGAVLHR-PHHAVRQQISKLHseVYVSARTRGSPAYQYGLTPTNFVTHVNGKPTKDIEDFLKVVVPIPDN 935
                 679*************.*********999997888999****************************************8 PP

>> Trypsin_2  Trypsin-like peptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.4   0.0   1.2e-24   2.1e-21       1     150 []      95     240 ..      95     240 .. 0.84
   2 !   13.0   0.2   8.1e-05      0.14      36     149 ..     590     708 ..     562     709 .. 0.81

  Alignments for each domain:
  == domain 1  score: 77.4 bits;  conditional E-value: 1.2e-24
   Trypsin_2   1 GsGflvgsd.glilTnaHvvdsadgaavkaikkkveeagadgrevpakvvaadpelDlAllkv..ssderaglpplplgpsealkggepvyvvGyplgg 96 
                 ++Gf+v+++ g+i+Tn+Hvv+                ++++ +ev+a +v++dp +D+ +l++  +     ++  l+l+p+ a +g+ ++ vvG+ + g
  KHJ32597.1  95 ATGFVVDAErGYIMTNRHVVGAGPFWGF--------CIFDNHEEVDAYPVYRDPVHDFGILRFnpKAIKYMPVTSLTLRPDLAKVGS-EIRVVGN-DAG 183
                 69*****9977*********99998888........89*************************665556666666668886655555.*******.777 PP

   Trypsin_2  97 eksgsvssGivsgvve....sesaasgegesflqtdaatspGsSGGplfdsdGrvvGl 150
                 ek  s+ sG++s++++     ++     +++++q++a+ s+GsSG+p+++ dG  v+l
  KHJ32597.1 184 EKL-SILSGVISRLDRnapeYAEGYCDFNTNYIQAAASASGGSSGSPVVNIDGYAVAL 240
                 776.************866644444445567779999999*************99986 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 8.1e-05
   Trypsin_2  36 eagadgrevpakvvaadpelDlAllkv.ssderaglpplplgpsealkggepvyvvGyplggeksgsvssGivsgvve.......sesaasgegesflq 126
                 ++ ad   v++kvv  +p   +A++k  +s   a+++ ++l+ +  ++g  + y vG+ +       +++ +v++++         + + +  + + ++
  KHJ32597.1 590 ITIADSIIVEGKVVFMHPLQNYAVIKYdPSLVMAPVQSAKLSVTHISQGA-STYFVGFNQNMRI--VIAQTTVTDITAvaipantLAPRYRAVNVDAIT 685
                 677899999********666*******99999999999999998866666.*******555554..89999999999988888887888888888888* PP

   Trypsin_2 127 tdaatspGsSGGplfd.sdGrvvG 149
                  d+++ +G+ G+ ++  +dG+v +
  KHJ32597.1 686 VDTSL-SGQCGSGVLVgEDGTVQA 708
                 ***99.799999999879999855 PP

>> PDZ_6  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.1   1.2e-08   2.2e-05       5      56 .]     319     367 ..     315     367 .. 0.96
   2 !    7.5   0.1     0.002       3.6      13      37 ..     803     825 ..     802     828 .. 0.81
   3 !   16.0   0.0   4.5e-06    0.0081       2      40 ..     891     927 ..     890     941 .. 0.89

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1.2e-08
       PDZ_6   5 VdpgsPAdrAGlrvGDiilsvNGqpveglsladvaallrgsagesvvlvvrr 56 
                 V p++P ++  ++ GD++++vNG+ +  ++   + ++l +s+g +v l+++r
  KHJ32597.1 319 VLPEGPSYQK-VEEGDVLVKVNGELL--TQFIRLDDILDSSVGGHVKLLLQR 367
                 8899****98.***************..**********************98 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.002
       PDZ_6  13 rAGlrvGDiilsvNGqpveglslad 37 
                 +A l  GD+il +NG+ +  + + +
  KHJ32597.1 803 KATLLEGDVILTLNGKII--TRVSE 825
                 666899**********99..76665 PP

  == domain 3  score: 16.0 bits;  conditional E-value: 4.5e-06
       PDZ_6   2 VtaVdpgsPAdrAGlrvGDiilsvNGqpveglsladvaa 40 
                 V+a   gsPA++ Gl +   ++ vNG+p+  ++++d+  
  KHJ32597.1 891 VSARTRGSPAYQYGLTPTNFVTHVNGKPT--KDIEDFLK 927
                 778889***********************..**999876 PP

>> PDZ_2  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0         3   5.3e+03      25      51 ..      15      41 ..      14      49 .. 0.87
   2 !   22.4   0.0   6.2e-08   0.00011      13      82 .]     310     378 ..     293     378 .. 0.89
   3 ?    5.1   0.0     0.016        28      32      81 ..     429     478 ..     409     479 .. 0.88
   4 !    8.3   0.1    0.0016       2.9      28      56 ..     802     830 ..     792     840 .. 0.86
   5 !   11.2   0.0   0.00019      0.34       9      55 ..     884     928 ..     876     936 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 3
                SGGGGT.--TT-EEEEETTB--SSHHH CS
       PDZ_2 25 gPaakaglkagDvilkvdgkkvksled 51
                gPa ++ +k++  ++  d++ +++l+d
  KHJ32597.1 15 GPAIERPIKQQKLLTGMDSNHLNTLSD 41
                7999999****9******999999887 PP

  == domain 2  score: 22.4 bits;  conditional E-value: 6.2e-08
                 ..-EEEEE.E-TTSGGGGT.--TT-EEEEETTB--SSHHHHHHHHHTS-TT-EEEEEEEETTEEEEEEEE- CS
       PDZ_2  13 tggvlvvs.VkeggPaakaglkagDvilkvdgkkvksledlislllkkkpGdtVkltvlRdgkkktvevkl 82 
                 ++g+lv++ V ++gP+ ++ ++ gDv++kv+g  + ++      +l  + G  Vkl ++R+g++ +v+v++
  KHJ32597.1 310 ETGMLVAEiVLPEGPSYQK-VEEGDVLVKVNGELL-TQFIRLDDILDSSVGGHVKLLLQRGGEDIEVDVEV 378
                 45899999999****9998.*************99.555666789999*********************86 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.016
                 --TT-EEEEETTB--SSHHHHHHHHHTS-TT-EEEEEEEETTEEEEEEEE CS
       PDZ_2  32 lkagDvilkvdgkkvksledlislllkkkpGdtVkltvlRdgkkktvevk 81 
                 + +g +i  vd+kk  +l+++i+ + +      V +t+++  + +t++ +
  KHJ32597.1 429 MDSGWIIQTVDHKKTPDLDSFIEVMKNIPDRARVVVTYKHLRDLHTLNTS 478
                 66788999********************************9999998865 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.0016
                 GGT.--TT-EEEEETTB--SSHHHHHHHH CS
       PDZ_2  28 akaglkagDvilkvdgkkvksledlisll 56 
                 +ka l  gDvil ++gk ++  ++l+ ++
  KHJ32597.1 802 DKATLLEGDVILTLNGKIITRVSELDVMY 830
                 5899***************9998887554 PP

  == domain 5  score: 11.2 bits;  conditional E-value: 0.00019
                 ----..-EEEEEE-TTSGGGGT.--TT-EEEEETTB--SSHHHHHHH CS
       PDZ_2   9 deedtggvlvvsVkeggPaakaglkagDvilkvdgkkvksledlisl 55 
                 ++++  +v+v   + g+Pa + gl +   +++v+gk+ k+ ed+ + 
  KHJ32597.1 884 KLHS--EVYVSARTRGSPAYQYGLTPTNFVTHVNGKPTKDIEDFLKV 928
                 4444..899999999**************************999865 PP

>> PDZ  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.4   2.6e+03      35      73 ..      14      51 ..      13      54 .. 0.87
   2 !   17.3   0.0   2.5e-06    0.0045       8      67 ..     289     353 ..     281     366 .. 0.75
   3 !    8.4   0.0    0.0015       2.8      38      66 ..     801     828 ..     778     831 .. 0.82
   4 ?    4.6   0.0     0.024        43      26      62 ..     887     923 ..     875     929 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.4
                TTSHHHHHTSSTTEEEEEETTEETTTSHHHHHHHHHHTT CS
         PDZ 35 pggaaeadglkvGDkIlsvNgvdvenvsheeavqaikgs 73
                pg+a e+  +k    +++++  +++++s+e+  ++++++
  KHJ32597.1 14 PGPAIERP-IKQQKLLTGMDSNHLNTLSDEDLEIEVEET 51
                67888888.999999****************99988876 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 2.5e-06
                 TTSESSEEEEEETTSS....SSSSEEEEEECTT.SHHHHHTSSTTEEEEEETTEETTTS.HHHHHH CS
         PDZ   8 grgglGfslkggsdqr....gdkgifvsevlpg.gaaeadglkvGDkIlsvNgvdvenv.sheeav 67 
                 ++ +lG+++  +s+ r    +++g  v+e++   g+  ++ +++GD++++vNg+ ++++ +++++ 
  KHJ32597.1 289 ECRRLGLTILWESAIRknfpKETGMLVAEIVLPeGPSYQK-VEEGDVLVKVNGELLTQFiRLDDIL 353
                 7888888888877777889999*******88777******.*************999994444443 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.0015
                 HHHHHTSSTTEEEEEETTEETTTSHHHHH CS
         PDZ  38 aaeadglkvGDkIlsvNgvdvenvsheea 66 
                  ++a  l +GD+Il  Ng+ ++ vs++++
  KHJ32597.1 801 DDKAT-LLEGDVILTLNGKIITRVSELDV 828
                 55666.99****************99987 PP

  == domain 4  score: 4.6 bits;  conditional E-value: 0.024
                 SSEEEEEECTTSHHHHHTSSTTEEEEEETTEETTTSH CS
         PDZ  26 kgifvsevlpggaaeadglkvGDkIlsvNgvdvenvs 62 
                  +++vs   +g++a + gl +   ++ vNg+++++++
  KHJ32597.1 887 SEVYVSARTRGSPAYQYGLTPTNFVTHVNGKPTKDIE 923
                 689***************************9988775 PP

>> Trypsin  Trypsin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   3.4e-07    0.0006      26     203 ..      94     248 ..      76     257 .. 0.71

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 3.4e-07
                 EEEEEEEETT..EEEEEGGGTTTGGGEEEEESESBTTSCTTTEEEEEEEEEEEETTEBTTTTTTTEEEEEESSSSTSBSSBHCCBBCSTTHTTSTTTEE CS
     Trypsin  26 lCgGslisen..wvlTAaHCvsnasdvkvvlgehnlkksegkeqklkvekvivhpnynpstldnDiallklkepvklgdtvrpiclpaassslpvgttc 122
                  ++G++++++  +++T+ H+v     +        +++ e+    ++v        y++    +D+++l+ + ++     v  + l+   + ++vg+++
  KHJ32597.1  94 EATGFVVDAErgYIMTNRHVVGAGPFWGF----CIFDNHEE-VDAYPV--------YRDPV--HDFGILRFNPKAIKYMPVTSLTLRP--DLAKVGSEI 175
                 47899998888899999999997333333....22223333.222333........54554..6**********88888888888877..555****** PP

                 EEEESSBSSTSSBSSBEEEEEEEEEEHHHHHHH.TTTT..STTTEEEEESTTSSSBCTTTTTTSEEEETTTEEEEEEEEESSSS CS
     Trypsin 123 lvsGwgrtkekgksdtlqevevpvvsretcksa.ykgk..vtenmlcagakeggkdacqGDSGGPlvcsdgelvGivswgkgca 203
                  v+G +  ++ +    l  + ++ ++r+  + a    +   ++n+++a a     +a  G SG+P+v+ dg++v +  +g++ +
  KHJ32597.1 176 RVVGNDAGEKLS---ILS-GVISRLDRNAPEYAeG--YcdFNTNYIQAAA-----SASGGSSGSPVVNIDGYAVALQAGGRSDG 248
                 *******98888...444.4444445543333223..3449*********.....999*************9999888885444 PP

>> 4HPAD_g_N  4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   8.3e-06     0.015      12      29 ..     567     584 ..     565     585 .. 0.94

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 8.3e-06
   4HPAD_g_N  12 lDceKGiCrltkeivpiD 29 
                 +D+eKG+  +++ i+p+D
  KHJ32597.1 567 IDAEKGLVVVSRAIIPYD 584
                 9****************9 PP

>> Tricorn_PDZ  Tricorn protease PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.2     0.001       1.9      39      81 ..     328     370 ..     327     378 .. 0.89
   2 ?   -1.9   0.0       1.8   3.3e+03      41      69 ..     430     458 ..     428     470 .. 0.76
   3 ?    0.1   0.0      0.45   8.1e+02      42      60 ..     808     826 ..     804     840 .. 0.84
   4 ?    1.8   0.0      0.13   2.4e+02      28      63 ..     895     928 ..     881     938 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.001
                  --.TT-EEEEETTEE-BTTB-HHHHHHTTTTSEEEEEEE-STT CS
  Tricorn_PDZ  39 nvreGdlilavdgepvskekgiaelLvgkagkeveLtvkrkdg 81 
                  +v+eGd++++v+ge +++   ++ +L +  g +v+L ++r+++
   KHJ32597.1 328 KVEEGDVLVKVNGELLTQFIRLDDILDSSVGGHVKLLLQRGGE 370
                  589*********************************9999765 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.8
                  .TT-EEEEETTEE-BTTB-HHHHHHTTTT CS
  Tricorn_PDZ  41 reGdlilavdgepvskekgiaelLvgkag 69 
                    G++i  vd +++   +++ e++ +  +
   KHJ32597.1 430 DSGWIIQTVDHKKTPDLDSFIEVMKNIPD 458
                  579*********99999888888877655 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.45
                  TT-EEEEETTEE-BTTB-H CS
  Tricorn_PDZ  42 eGdlilavdgepvskekgi 60 
                  eGd+il ++g+ +++++++
   KHJ32597.1 808 EGDVILTLNGKIITRVSEL 826
                  8*********999887765 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.13
                  S-B-GGGGGS---.TT-EEEEETTEE-BTTB-HHHH CS
  Tricorn_PDZ  28 earSPLaepGvnvreGdlilavdgepvskekgiael 63 
                     SP  ++G+     + +++v+g+p++  +++ ++
   KHJ32597.1 895 TRGSPAYQYGLT--PTNFVTHVNGKPTKDIEDFLKV 928
                  456899999999..789*********9988877665 PP

>> Peptidase_S46  Peptidase S46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   9.7e-05      0.17     613     664 ..     202     254 ..     190     262 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 9.7e-05
                    GG.-BTTB-EEEEE.ES----TT-TT-EEE-TTS-EEEEEEEE-GGGTTTTT- CS
  Peptidase_S46 613 ryaeelgsvpvnfl.stnDitGGNSGSPvlngkgelvGlaFDgnieslsgdil 664
                    +yae   + + n++ + +   GG SGSPv+n +g  v l   g  ++ + d++
     KHJ32597.1 202 EYAEGYCDFNTNYIqAAASASGGSSGSPVVNIDGYAVALQAGGRSDGAATDYF 254
                    677777778888873446678******************99999999998885 PP

>> DUF31  Putative peptidase (DUF31)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00024      0.43     336     369 ..     206     239 ..     181     243 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00024
       DUF31 336 kytnyGlgyllkssalagGaSGSlvrnkdnklvG 369
                  y  +  +y+    + +gG+SGS+v+n d+  v+
  KHJ32597.1 206 GYCDFNTNYIQAAASASGGSSGSPVVNIDGYAVA 239
                 56677788999999***************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1007 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       461  (0.0257125); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.73u 0.26s 00:00:00.99 Elapsed: 00:00:00.43
# Mc/sec: 7076.18
//
Query:       KHJ32598.1  [L=802]
Description: putative basic proline-rich protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.23   12.0   0.3        7.8    7.1   0.0    2.5  2  Tai4      Type VI secretion system (T6SS), amidase immunity p


Domain annotation for each model (and alignments):
>> Tai4  Type VI secretion system (T6SS), amidase immunity protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.2     0.018   3.2e+02      23      72 ..      99     148 ..      89     153 .. 0.84
   2 ?    7.1   0.0   0.00043       7.8      24      55 ..     330     361 ..     324     378 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.018
                 HHHHHHHHHHHHHH--S-HH.HHHHHHHHHHHHHT-......----SSS- CS
        Tai4  23 kkDagasasallewtsydleaateeikelvdkylkrdytnplkeseskgv 72 
                 ++D++++ + ++++t+   ++ t++  +lv+    + yt ++++++++  
  KHJ32598.1  99 EQDLEKTWAKWEDITENLKNEGTTKNSDLVNINSTTPYTLTNSAESQEPT 148
                 68*************999999**********9999988887777766655 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.00043
                 HHHHHHHHHHHHH--S-HH.HHHHHHHHHHHH CS
        Tai4  24 kDagasasallewtsydleaateeikelvdky 55 
                 kD+++s++ + ++ts ++ ++t++++++v++ 
  KHJ32598.1 330 KDISSSYNFYTKTTSNPVSSVTNATQTIVTTS 361
                 8***************************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (802 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       850  (0.0474092); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.31s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 5256.53
//
Query:       KHJ32599.1  [L=1001]
Description: putative class ii chitin synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.7e-77  257.3   0.2    8.3e-77  256.7   0.2    1.2  1  Chitin_synth_1   Chitin synthase
    1.1e-27   95.7   0.1    2.5e-27   94.6   0.1    1.6  1  Chitin_synth_1N  Chitin synthase N-terminal
    3.2e-24   85.5   5.2    5.9e-22   78.0   0.1    2.5  3  Chitin_synth_2   Chitin synthase
    1.2e-07   31.9   0.9    4.4e-07   30.0   0.9    2.0  1  Glyco_trans_2_3  Glycosyl transferase family group 2


Domain annotation for each model (and alignments):
>> Chitin_synth_1  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  256.7   0.2   1.8e-80   8.3e-77       1     163 []     310     472 ..     310     472 .. 1.00

  Alignments for each domain:
  == domain 1  score: 256.7 bits;  conditional E-value: 1.8e-80
  Chitin_synth_1   1 mynEdkellarTLkgvmkNieelkkrkkskvwgkdsWkkivVcivsDGrekideetldvlaalgvyqegvakkkvngkevkahlfeyttqlsvde 95 
                     mynE+++ ++rT+++vmkN++++++r+ks++wg+++W+kivVciv+DGr+k++++tld+laa+g+yq+g+ak+ vn+kev+ah++eyttq+s+d+
      KHJ32599.1 310 MYNENEIDFTRTIHAVMKNVSHFCSRTKSRTWGENGWQKIVVCIVADGRTKVHPRTLDALAAMGIYQDGIAKNLVNQKEVHAHVYEYTTQVSLDS 404
                     9********************************************************************************************** PP

  Chitin_synth_1  96 elklkenekslvpvqllfclkeknakkinShrWlfnafarllqPevcvlldvGtkpgkkslyklwkaf 163
                     elk+k++ek++vp+q++fc+keknakk+nShrW+fnaf+r l P++c+lldvGt+pg++sly+lwkaf
      KHJ32599.1 405 ELKFKGAEKGIVPCQMIFCMKEKNAKKLNSHRWFFNAFGRALTPNICILLDVGTRPGSNSLYHLWKAF 472
                     ******************************************************************98 PP

>> Chitin_synth_1N  Chitin synthase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.6   0.1   5.6e-31   2.5e-27       1      73 []     237     309 ..     237     309 .. 0.95

  Alignments for each domain:
  == domain 1  score: 94.6 bits;  conditional E-value: 5.6e-31
  Chitin_synth_1N   1 tkkvkLlngnlvldlpvpkkllkalpeeekeseEfthmRYtAvTcdPddftkegytLRqalyg..ReteLlIviT 73 
                      +k+vkL+ng+l+l++++p+ l+++lp++  ++ EfthmRYtAvTcdPddf+++gy+LRq+     ReteL+I++T
       KHJ32599.1 237 KKEVKLINGELILECKIPTILYSFLPRR--DDVEFTHMRYTAVTCDPDDFVTRGYKLRQNISPtgRETELFICVT 309
                      589***********************76..89****************************97777*********9 PP

>> Chitin_synth_2  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0      0.79   3.5e+03      25      48 ..     302     325 ..     288     329 .. 0.74
   2 !   78.0   0.1   1.3e-25   5.9e-22     204     451 ..     450     711 ..     444     742 .. 0.74
   3 !    7.4   3.0   0.00033       1.5     404     491 ..     735     829 ..     711     838 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 0.79
  Chitin_synth_2  25 kfticlvtaysegeeglrttldsl 48 
                     +   + vt y e+e ++ +t+ ++
      KHJ32599.1 302 TELFICVTMYNENEIDFTRTIHAV 325
                     444566999*****9999999887 PP

  == domain 2  score: 78.0 bits;  conditional E-value: 1.3e-25
  Chitin_synth_2 204 ivlmvdadtkvapdsltrlvaalvkdpeilglcGetkia.nkkesw....vtaiqvfeyyishhlskafesvfGsvtclPGcfslyrikaakgad 293
                     i++++d  t+  ++sl +l  a+ +d+++ g cGe k    k  s     + a q fey +s  l k +esvfG +t lPG +s+yr +a ++ +
      KHJ32599.1 450 ICILLDVGTRPGSNSLYHLWKAFDTDSNVAGACGEIKAMkGKYGSAlfnpLVASQNFEYKMSNILDKPLESVFGYITVLPGALSAYRYHALQNDH 544
                     78899******************************9865145555422234688*************************************9999 PP

  Chitin_synth_2 294 gkwvPi..lvspeiveeysenvvdtlhkknllllGedrylt.tlllktfpkrktvfvpqakcktvaPdtfkvllsqrrrwinstvh.nllelvlv 384
                         P+  + + e+      +  d     n ++l edr l   l+ k  +k   ++v++ + +t +Pd    ++sqrrrw+n +    +  lv  
      KHJ32599.1 545 TGHGPLsqYFKGEM---LHGQDADV-FTAN-MYLAEDRILCwELVAKRDEKWVLKYVKSCTGETDVPDAVPEFVSQRRRWLNGAFFaAVYSLVHF 634
                     88999722233333...33344443.4445.589*****984699999**********************************8765145677777 PP

  Chitin_synth_2 385 rdlcGt.......fcfsmrfvv.fieligtvvlPvaiaftlylivasilksklvpv...iplvllaivlGlpailivl 451
                     r++  t       +++ ++fv  fi+l+ t    +   +t+y +  s+  +++ p    i lvl+ i +    +l++ 
      KHJ32599.1 635 RQIWRTdhtigrkILLHIEFVYqFINLLFTYFSLANFYLTFYFVAGSLSDPHIDPFghrIGLVLFVI-FRYALVLLIC 711
                     7764332222223788999995599******999999999**9999998866555322277776643.3333333333 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.00033
  Chitin_synth_2 404 igtvvlPvaiaftlylivasilk.....skl.vpvip..lvllaivlGlpailivltarkleyvawllvyllalPifnfvlPlyafwhlddfswG 490
                     i ++v+    +  +y+i++++ +     + +  ++ +  +v  a  +Gl  ++  l    +++ +    y+l lP +  +l +yaf +  d swG
      KHJ32599.1 735 IYAIVMTYNTCACFYIIIRQLRNgttklE-FgNNMFTnvIVSTASTVGLYFLMSFLYLDPWHMFTSAGQYFLLLPSYICTLQIYAFCNTHDISWG 828
                     55677777788888999988766322221.11233431144557789999999999999************************************ PP

  Chitin_synth_2 491 e 491
                      
      KHJ32599.1 829 T 829
                     6 PP

>> Glyco_trans_2_3  Glycosyl transferase family group 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.9   9.7e-11   4.4e-07       3     187 ..     452     709 ..     450     718 .. 0.70

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 9.7e-11
  Glyco_trans_2_3   3 lllDaDtvlppdclreiaaela.spevaivqgpvlvm....nva...nwleelaalffaedhgkdilvrealgrvvpsvGsgaflrrsalq... 85 
                      +llD  t++  ++l+ +   ++ + +va ++g + +m    + +   n l+  + ++++ + + d +  + +g  + ++G+ ++ r +alq   
       KHJ32599.1 452 ILLDVGTRPGSNSLYHLWKAFDtDSNVAGACGEIKAMkgkyG-SalfNPLVASQNFEYKMSNILDKPLESVFGYITVLPGALSAYRYHALQndh 544
                      789999999********999*9669***********976431.322244555556669*********************************888 PP

  Glyco_trans_2_3  86 ....................evggwdgdessvsEDfdmglrlqrkG...yrvrfvpeslvkekspltlraalrQrkRwayGc......el...e 147
                                          +v +    +  ++ED  ++  l +k    +++ +v +    + +p+ +  ++ Qr+Rw+ G+      +l   +
       KHJ32599.1 545 tghgplsqyfkgemlhgqdaDV-FTA--NMYLAEDRILCWELVAKRdekWVLKYVKSCTGETDVPDAVPEFVSQRRRWLNGAffaavySLvhfR 635
                      7777777777776555553333.333..479***********888877788888887778999******************9887665225554 PP

  Glyco_trans_2_3 148 klil..................lvrllgylgsllwsalplhlallllfslla................lalvll 187
                      ++++                   ++ll  ++sl+ ++l + +++  l+   +                +alvll
       KHJ32599.1 636 QIWRtdhtigrkillhiefvyqFINLLFTYFSLANFYLTFYFVAGSLSDPHIdpfghriglvlfvifrYALVLL 709
                      44447777777766777777664455555555555555544444444443335555554442222211444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1001 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       670  (0.0373696); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.74u 0.27s 00:00:01.01 Elapsed: 00:00:00.42
# Mc/sec: 7186.43
//
Query:       KHJ32600.1  [L=136]
Description: hypothetical protein EV44_g0352 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 998.89
//
Query:       KHJ32601.1  [L=144]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      0.002   18.3   0.0     0.0024   18.0   0.0    1.4  1  rve       Integrase core domain
  ------ inclusion threshold ------
       0.12   12.6   0.0        0.2   11.9   0.0    1.3  1  Sterile   Male sterility protein


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   2.7e-07    0.0024      36      96 ..      74     134 ..       9     141 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 2.7e-07
         rve  36 lilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsf 96 
                 + +a++  ++++ ++ ++ l + ++  + ++p r+++D g+e+ + +++e+l + +i++  
  KHJ32601.1  74 WKWAWPDYTKKTVPSQIRYLLEHLETKFSKTPTRIHTDGGTEFSNAELQEILLSCDIEWHK 134
                 4444544444566555666666666666656*********************999999865 PP

>> Sterile  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.2e-05       0.2      58      92 ..      61      95 ..      52      96 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.2e-05
     Sterile 58 lseedrkiFnfdvrsidwedYfenyilGlrkYvlk 92
                l ++  + +n+++ +  w+dY+++++++  +Y+l+
  KHJ32601.1 61 LANSTARNYNYNTWKWAWPDYTKKTVPSQIRYLLE 95
                55667899*************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1110.75
//
Query:       KHJ32602.1  [L=935]
Description: putative 26s proteasome regulatory subunit rpn-1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   2.9e-111  371.8   6.7   5.2e-111  371.0   6.7    1.4  1  RPN1_RPN2_N  RPN1/RPN2 N-terminal domain
    5.3e-28   96.8   0.0    9.2e-28   96.1   0.0    1.4  1  RPN1_C       26S proteasome non-ATPase regulatory subunit RPN
    4.7e-22   77.2  16.0    3.6e-06   27.1   0.2    9.3  9  PC_rep       Proteasome/cyclosome repeat
    2.4e-06   27.8   0.4       0.48   10.8   0.0    4.5  5  HEAT_2       HEAT repeats
  ------ inclusion threshold ------
       0.11   12.9   0.0         11    6.5   0.0    3.3  3  SUKH_6       SMI1-KNR4 cell-wall


Domain annotation for each model (and alignments):
>> RPN1_RPN2_N  RPN1/RPN2 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  371.0   6.7  1.4e-114  5.2e-111       1     309 []      59     358 ..      59     358 .. 1.00

  Alignments for each domain:
  == domain 1  score: 371.0 bits;  conditional E-value: 1.4e-114
  RPN1_RPN2_N   1 LellverlkdadaelaklaLeaLkeeirtstssmTSvPkPLKfLrphyetlkeiyetlkkskakklladilsvlamtlsdegkresLkyrlegskedi 98 
                  L++lverl++++ +l+k+aLea+k++i+tstssmT+vPkPLKfLrphyetl+++ye+++  ++k++lad+lsv++mt+sde+++++Lkyrl + ++di
   KHJ32602.1  59 LDMLVERLTEKNSSLYKAALEAIKDSIKTSTSSMTAVPKPLKFLRPHYETLTNLYENWPVGDDKISLADVLSVISMTFSDEDNQNTLKYRLLAPTSDI 156
                  89************************************************************************************************ PP

  RPN1_RPN2_N  99 gsWGheYvrhLaaeiaeeyqerqeeekeeetkekkkkvkellelvkeivpfllkhnaeaeAvDLllEvekleklvklvdeenyqrvclYLlscakyla 196
                   sWGheY +hLa e++e+y++r +++         +++++l++l+  ++p +lk naea+AvDL+ E+e +e++ k++d+++y+rvclY++s++++l+
   KHJ32602.1 157 ASWGHEYTKHLALELGETYTKRLTAD---------ESTQDLIDLTLILIPLFLKSNAEADAVDLMSELEIIEDIPKFLDKDTYSRVCLYMVSMVNLLT 245
                  **************************.........899************************************************************ PP

  RPN1_RPN2_N 197 epddvellrvafeiyrklkkyseaLrvalrlndkelvkevfkaaedklvkkQlayllarqqvkleleeledededlneilsneklsehfkaLakdLdv 294
                  +p+d+++lr+a+ iy+k++++++a+++a+rlnd +l++++f++++d  +kkQ+a+l+arqq+ l+l ++++ d+d+ ++l+n++l ehfk+Lak+L++
   KHJ32602.1 246 YPEDQQFLRTAHVIYLKYGQLTQAIVLAIRLNDINLIESDFNSTNDVALKKQMAFLIARQQIVLDLPADTELDQDILDCLNNTNLPEHFKSLAKELNI 343
                  ************************************************************************************************** PP

  RPN1_RPN2_N 295 lepktpediYKshLe 309
                  l+pkt ediYKshLe
   KHJ32602.1 344 LDPKTTEDIYKSHLE 358
                  **************7 PP

>> RPN1_C  26S proteasome non-ATPase regulatory subunit RPN1 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.1   0.0   2.6e-31   9.2e-28       1      54 []     845     898 ..     845     898 .. 0.99

  Alignments for each domain:
  == domain 1  score: 96.1 bits;  conditional E-value: 2.6e-31
      RPN1_C   1 VgqaGkpktItGfqThttPVlLaageRAELateeYiplssvLEgivilkknpdy 54 
                 VgqaG+pktItG+qT++tPVlLa+geRAEL++e+Y+ l++ LEg+vil+knpd+
  KHJ32602.1 845 VGQAGRPKTITGWQTQSTPVLLAYGERAELEDEQYLCLTNNLEGLVILRKNPDW 898
                 9****************************************************9 PP

>> PC_rep  Proteasome/cyclosome repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.0    0.0055        20       3      34 ..     417     447 ..     415     448 .. 0.85
   2 !    6.1   0.0    0.0045        16       4      22 ..     452     472 ..     449     486 .. 0.85
   3 !   27.1   0.2     1e-09   3.6e-06       2      33 ..     489     520 ..     488     522 .. 0.93
   4 !   10.9   0.0   0.00014       0.5       2      24 ..     526     548 ..     525     555 .. 0.79
   5 ?    2.1   0.0     0.084     3e+02       3      23 ..     568     590 ..     568     596 .. 0.75
   6 ?    3.0   0.1     0.043   1.5e+02       2      13 ..     645     656 ..     645     661 .. 0.88
   7 ?    0.2   0.0      0.34   1.2e+03      18      33 ..     698     713 ..     692     714 .. 0.88
   8 !   22.4   0.1   3.3e-08   0.00012       1      29 [.     716     744 ..     716     749 .. 0.92
   9 ?   -0.0   0.1      0.41   1.5e+03       4      16 ..     756     768 ..     756     771 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0055
                 HHHHHHHCTTSTCHHHHHHHHHHHHHHSSHHH CS
      PC_rep   3 llALGlihaGsgneeaislLkpylsdtsaevr 34 
                  +++G+++++   + +++ +++y + ++ e++
  KHJ32602.1 417 MASMGMLCLWDVEG-GLDKIDKYTYAPEEEIV 447
                 589*******6666.********999998876 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0045
                 HHHHHHCTTSTCH..HHHHHH CS
      PC_rep   4 lALGlihaGsgne..eaislL 22 
                 lA+G+i+ G++ +  +a++lL
  KHJ32602.1 452 LAIGIINSGVRIDsdPALALL 472
                 9********999999999998 PP

  == domain 3  score: 27.1 bits;  conditional E-value: 1e-09
                 HHHHHHHHCTTSTCHHHHHHHHHHHHHHSSHH CS
      PC_rep   2 AllALGlihaGsgneeaislLkpylsdtsaev 33 
                 ++++LG+++aGs+ e +++lL+p++ dts ++
  KHJ32602.1 489 SIMGLGIAYAGSNKEVLLDLLLPIVVDTSLDM 520
                 79**************************9876 PP

  == domain 4  score: 10.9 bits;  conditional E-value: 0.00014
                 HHHHHHHHCTTSTCHHHHHHHHH CS
      PC_rep   2 AllALGlihaGsgneeaislLkp 24 
                 A+l+LG+i+ Gs n+++ + + +
  KHJ32602.1 526 AALSLGMIFVGSSNSDVSEAIVQ 548
                 9**********999877776665 PP

  == domain 5  score: 2.1 bits;  conditional E-value: 0.084
                 HHHHHHHCTTSTCH..HHHHHHH CS
      PC_rep   3 llALGlihaGsgne..eaislLk 23 
                 +l+LGl++ G   e   +++ Lk
  KHJ32602.1 568 ALGLGLLFFGQQEEvdVILETLK 590
                 79********7777655555555 PP

  == domain 6  score: 3.0 bits;  conditional E-value: 0.043
                 HHHHHHHHCTTS CS
      PC_rep   2 AllALGlihaGs 13 
                 A+++LGl+ +G 
  KHJ32602.1 645 AVIGLGLVAMGE 656
                 899*******95 PP

  == domain 7  score: 0.2 bits;  conditional E-value: 0.34
                 HHHHHHHHHHHHSSHH CS
      PC_rep  18 aislLkpylsdtsaev 33 
                 +++ L+ y +d++++v
  KHJ32602.1 698 VYDTLSRYSHDNDNDV 713
                 89**********9986 PP

  == domain 8  score: 22.4 bits;  conditional E-value: 3.3e-08
                 HHHHHHHHHCTTSTCHHHHHHHHHHHHHH CS
      PC_rep   1 GAllALGlihaGsgneeaislLkpylsdt 29 
                 +A++A+Gl++aG++n ++ +lL++++s++
  KHJ32602.1 716 NAIFAMGLLGAGTNNARLAQLLRQLASYY 744
                 59***********************9875 PP

  == domain 9  score: -0.0 bits;  conditional E-value: 0.41
                 HHHHHHCTTSTCH CS
      PC_rep   4 lALGlihaGsgne 16 
                 +A+Gl+h G g+ 
  KHJ32602.1 756 IAQGLLHVGKGTM 768
                 69*******9987 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.17   6.2e+02       2      25 ..      60      82 ..      47     105 .. 0.60
   2 !   10.8   0.0   0.00014      0.48       8      74 ..     478     553 ..     471     562 .. 0.73
   3 !    7.8   0.0    0.0012       4.2      12      86 ..     637     720 ..     628     722 .. 0.81
   4 !    7.4   0.0    0.0016       5.9      34      72 ..     700     738 ..     685     752 .. 0.55
   5 ?   -3.4   0.0       3.9   1.4e+04      16      33 ..     836     854 ..     834     855 .. 0.70

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.17
      HEAT_2  2 daLlqalendpdpevrraairaLg 25
                d L+++l + ++  + +aa++a+ 
  KHJ32602.1 60 DMLVERL-TEKNSSLYKAALEAIK 82
                2333444.3344444444444443 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00014
      HEAT_2   8 lendpdpevrraairaLg....rignpealpaLvelleded..pavRraaaeaLgai..gd..pealpaLkellddd 74 
                 l ++ +  vr + i+ Lg      + + +l++L++++ d++  + + ++aa +Lg i  g+  +++ +a  + ++dd
  KHJ32602.1 478 L-HHQSSLVRMTSIMGLGiayaGSNKEVLLDLLLPIVVDTSldMQISAMAALSLGMIfvGSsnSDVSEAIVQTFLDD 553
                 6.79999************9766677788********7775227788888888886655643355566655555554 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0012
      HEAT_2  12 pdpevrraairaLg......rignpealpaLvellededpavRraaaeaLgaigd..pe..alpaLkellddddddvvReaAaea 86 
                  d+ +++ a++ Lg      +ig + +l+ +  l+   ++++R+a+  a+g +    p+  +++ L ++ + d+d +v   A+ a
  KHJ32602.1 637 GDELLQAYAVIGLGlvamgeDIGQEMVLRQFGHLMHYGKANIRKAVPLAMGLLSPsnPQikVYDTLSRYSH-DNDNDVAINAIFA 720
                 56779999******99999999999**************************997423445599****9775.5666666666766 PP

  == domain 4  score: 7.4 bits;  conditional E-value: 0.0016
      HEAT_2  34 paLvellededpavRraaaeaLgaigdpealpaLkelld 72 
                 ++L ++  d d +v  +a+ a+g +g   + + L++ll+
  KHJ32602.1 700 DTLSRYSHDNDNDVAINAIFAMGLLGAGTNNARLAQLLR 738
                 555555566666666666666666653222222222222 PP

  == domain 5  score: -3.4 bits;  conditional E-value: 3.9
      HEAT_2  16 vrr.aairaLgrignpeal 33 
                 vr  +a+++ g+ g p+++
  KHJ32602.1 836 VRVgQAVDVVGQAGRPKTI 854
                 6655788888888887764 PP

>> SUKH_6  SMI1-KNR4 cell-wall
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0     0.003        11      12      91 ..     327     408 ..     324     421 .. 0.78
   2 ?    0.0   0.0       0.3   1.1e+03      35      88 ..     533     586 ..     529     596 .. 0.84
   3 ?    0.9   0.0      0.16   5.7e+02      80     120 ..     873     910 ..     871     910 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.003
      SUKH_6  12 gvkLPedYkeflkeynggefggnefigsseesivndaleilldegkeeeksefd..eeedrlpenllpiaedgggdlicldy 91 
                 + +LPe +k + ke n  +++++e i+ s+ ++ + a  + ld + ++    f   + + ++ ++ + + +d+    +++++
  KHJ32602.1 327 NTNLPEHFKSLAKELNILDPKTTEDIYKSHLESTRVAGLTNLDSARHNLAAGFVnaFVNAGFGQDKMMMVDDDTKSSWVWKT 408
                 789******************9998888888888877777777777777777767855677777777777777777777777 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.3
      SUKH_6  35 efigsseesivndaleilldegkeeeksefdeeedrlpenllpiaedgggdlic 88 
                 +f+gss+ ++++  ++++ld++ +   +++ +  + l  +ll++++ ++ d+i 
  KHJ32602.1 533 IFVGSSNSDVSEAIVQTFLDDERGYQLKDKWTRFMALGLGLLFFGQQEEVDVIL 586
                 68999999999*********9999988888899999999999999998888776 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.16
      SUKH_6  80 edgggdlicldyeendepkvvfwdseedgevekvadsFeeF 120
                 e ++ +++cl+    + +  v++  + d++  k+  +++eF
  KHJ32602.1 873 ELEDEQYLCLTN---NLEGLVILRKNPDWDDGKIDRNLKEF 910
                 677889999999...666666666****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (935 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      607  (0.0338558); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.74u 0.27s 00:00:01.01 Elapsed: 00:00:00.42
# Mc/sec: 6704.61
//
Query:       KHJ32603.1  [L=369]
Description: putative serine threonine-protein kinase rio2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.4e-39  133.1   0.2      2e-26   92.8   0.0    2.1  2  RIO1            RIO1 family
      4e-29  100.6   0.0      8e-29   99.7   0.0    1.5  1  Rio2_N          Rio2, N-terminal
    1.2e-05   25.4   0.1      0.013   15.5   0.0    2.3  2  APH             Phosphotransferase enzyme family
    0.00017   21.0   0.1        0.4   10.0   0.0    2.2  2  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
       0.17   10.7   0.2       0.36    9.6   0.2    1.6  1  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.8   0.0   5.5e-30     2e-26       2     143 ..     107     238 ..     106     240 .. 0.94
   2 !   37.9   0.6   3.6e-13   1.3e-09     144     181 ..     255     292 ..     249     297 .. 0.90

  Alignments for each domain:
  == domain 1  score: 92.8 bits;  conditional E-value: 5.5e-30
                 EEEEEETTTEEEEEEEE-S---SS-HHHHCTTTSTTSTCG--GS-HHHHHHHHHHHHHHHHHHHHHTT--S--EEEEETTEEEEE--EETTEEGGBHHH CS
        RIO1   2 VyhavsedgkevaiKiyktstteFkkrkkyvsgekrfkdrksktnprklvklwaekEfrnLkrleeagvpvPkpielkrhvlvmefigedgvaapklkd 100
                 ++++++e+g++ ++Ki+++++ +F+++   +++ k+    + + ++ ++++l+a kE++ + +l++ g+pvP+p++  rh +vm++i+   +++ +++ 
  KHJ32603.1 107 ILVVADEKGAQKVLKIHRLGRISFRTVATNRDYLKN----RASGSWMHMSRLAALKEYSFMVALRQNGFPVPEPLAQSRHTIVMSLID--AFPLRQISS 199
                 7889999***************************99....6789********************************************..********* PP

                 CG-HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETTE CS
        RIO1 101 veeeeeaeelyeevleemrklykeaglvHaDLSeyNvlvdedk 143
                 ++   + ++ly+e+++  +  +++ gl+H+D++e+N+l+ e+k
  KHJ32603.1 200 IP---DPASLYAELISL-IMRLAQFGLIHGDFNEFNILILEEK 238
                 **...8899*******5.555569**************99886 PP

  == domain 2  score: 37.9 bits;  conditional E-value: 3.6e-13
                 EEE--GTTEEETTSTTHHHHHHHHHHHHHHHHHTTC-- CS
        RIO1 144 vviIDvsQaveldhpnalefLerDveniikfFrrkgve 181
                 +++ID++Q+v++dh na+ +++rDv++i +fF+r++  
  KHJ32603.1 255 PILIDFPQMVSMDHANAEFYFDRDVNCIKRFFQRRFHF 292
                 689*******************************9865 PP

>> Rio2_N  Rio2, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.7   0.0   2.2e-32     8e-29       1      81 [.       8      88 ..       8      89 .. 0.97

  Alignments for each domain:
  == domain 1  score: 99.7 bits;  conditional E-value: 2.2e-32
      Rio2_N  1 lryLskedfrvLtavEmgmrnhevVptelieeisrlkeeevkkrlsrllkaklisr.ktakydGYkLtyeGyDyLALktlvk 81
                lryL+++d++ L+avE+g+rnhevVpt li ++s+ + ++v+k +s+l+ka+li+r k+akydGY+Lty+G+DyLAL+t++k
  KHJ32603.1  8 LRYLTPDDWKTLKAVETGSRNHEVVPTALIGQLSGFR-GGVHKNISTLAKAGLIARlKNAKYDGYRLTYGGLDYLALNTYRK 88
                69**********************************9.9***************************************9865 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   3.6e-06     0.013      34     108 ..     153     220 ..      98     221 .. 0.78
   2 !   11.2   0.0     7e-05      0.25     153     183 ..     207     237 ..     204     246 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 3.6e-06
                 HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SSHHHHHHHHHHHHHHHHHHCCHHCH CS
         APH  34 aeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllrklsaaqlpellealgeflaalhqv 108
                    + +e+ ++ +L+++g+pvPe+la    +  + +++ li   p r+++     ++   l+++l++++ +l q+
  KHJ32603.1 153 RLAALKEYSFMVALRQNGFPVPEPLA----QSRHTIVMSLIDAFPLRQISS---IPDPASLYAELISLIMRLAQF 220
                 445678999*****************....7788889**************...666777777777777777665 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 7e-05
                 HHHHHHH--SSS-EEEE-SS-SGGGEEEC.. CS
         APH 153 laalaallpgelptvllHgDlhpgNllvdpd 183
                 +a+l  l  +  + +l+HgD++  N+l+ ++
  KHJ32603.1 207 YAELISLIMRLAQFGLIHGDFNEFNILILEE 237
                 56666777777899*************9844 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   0.00011       0.4      50      82 ..     148     180 ..     121     191 .. 0.88
   2 !    8.9   0.0   0.00024      0.86     129     156 ..     212     248 ..     202     298 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00011
         Kdo  50 rfklgrtravrEfrllkrLeeagvavpkpvaag 82 
                 ++ ++r+ a +E++ + +L++ g++vp+p+a  
  KHJ32603.1 148 WMHMSRLAALKEYSFMVALRQNGFPVPEPLAQS 180
                 34499************************9975 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00024
         Kdo 129 rliaklhragvnHadlyaknillqqee.........e 156
                  li +l + g+ H+d++  nil+ +e+         +
  KHJ32603.1 212 SLIMRLAQFGLIHGDFNEFNILILEEKskdnnedgrK 248
                 68999******************99987655544431 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.2    0.0001      0.36     313     363 ..     208     267 ..      97     278 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0001
  Pkinase_fungal 313 rDaIkghrsLflkagiLHrDiSenNilitdskke..........gerkglLiDLDlakels 363
                     ++ I    +L  + g++H D  e Nili+++k++          ++   +LiD+   ++++
      KHJ32603.1 208 AELISLIMRLA-QFGLIHGDFNEFNILILEEKSKdnnedgrkeiEKFVPILIDFPQMVSMD 267
                     55666667888.99***************98666567766665666666777776666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       469  (0.0261587); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 2745.61
//
Query:       KHJ32604.1  [L=135]
Description: putative 60s ribosomal protein l27 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-36  125.1   4.3    1.6e-36  124.5   4.3    1.3  1  Ribosomal_L27e  Ribosomal L27e protein family
     0.0041   17.0   0.4       0.01   15.8   0.4    1.7  1  KOW             KOW motif


Domain annotation for each model (and alignments):
>> Ribosomal_L27e  Ribosomal L27e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.5   4.3   1.8e-40   1.6e-36       1      85 []      51     135 .]      51     135 .] 0.99

  Alignments for each domain:
  == domain 1  score: 124.5 bits;  conditional E-value: 1.8e-40
  Ribosomal_L27e   1 kVtkkmskkkiakrskikpFvKvvnynhlmpTRYtvdvedlkelvkkealkdpakrkeakkevkkkfeeryksgknkwffkkLrF 85 
                     +Vt++msk+++akrsk+kpF+Kv+nynh+mpTRYt+++e lk+++++e++k++++r++akk vkk++eery sgkn+wff++LrF
      KHJ32604.1  51 QVTRRMSKTRQAKRSKVKPFIKVINYNHIMPTRYTLELEGLKNVISTETFKEVSQREDAKKVVKKALEERYLSGKNRWFFTPLRF 135
                     59**********************************************************************************9 PP

>> KOW  KOW motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.4   1.1e-06      0.01       1      22 [.       6      27 ..       6      33 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.1e-06
                TTSEEEESSSTTTTCEEEEEEE CS
         KOW  1 pGdhVkVvsGphkGktGkVvkv 22
                +G++ ++++G+++Gk+ ++ + 
  KHJ32604.1  6 VGRVAIITRGRYAGKKVVIIQP 27
                799***************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       615  (0.034302); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1064.78
//
Query:       KHJ32605.1  [L=276]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.19s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 2251.39
//
Query:       KHJ32606.1  [L=1008]
Description: putative guanine-nucleotide exchange factor cdc24 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-39  134.5   0.4    5.5e-39  133.2   0.4    1.7  1  PH_10     Pleckstrin homology domain
    1.3e-28  100.4   0.1    2.3e-28   99.7   0.1    1.4  1  RhoGEF    RhoGEF domain
      1e-26   93.0   0.0    2.4e-26   91.8   0.0    1.7  1  CDC24     CDC24 Calponin
    2.9e-09   36.8   0.1    6.4e-09   35.6   0.1    1.6  1  PB1       PB1 domain


Domain annotation for each model (and alignments):
>> PH_10  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.2   0.4   1.2e-42   5.5e-39       2     121 ..     462     586 ..     461     588 .. 0.88

  Alignments for each domain:
  == domain 1  score: 133.2 bits;  conditional E-value: 1.2e-42
       PH_10   2 kfGeLllhdtltVkkd.sdsereyevyLFekillcvkevkeekkkksksssllkkksssss....kkkktklqLKGrilisnvtevtssskpgsyslqi 95 
                 +fGeLllh+++ V ++ sd+++ey +yLFe+illc+k+++++k+k++   s+++kk+++++      +++klqLKGri+++nvtev s +k gsy++qi
  KHJ32606.1 462 HFGELLLHGNFPVVTGkSDVQKEYTIYLFERILLCCKDMNPNKSKEKLIPSQKDKKDKKDKnkkePYRNSKLQLKGRIFMTNVTEVLSLAKLGSYTVQI 560
                 8************9999************************95555545555444444444555678899***************************** PP

       PH_10  96 swkgdkelesftlrfkneeqlkkWes 121
                 +wk+d++ e+f++rf nee +kkW +
  KHJ32606.1 561 FWKADPGIENFIIRFTNEEIMKKWYE 586
                 ************************86 PP

>> RhoGEF  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.7   0.1   5.1e-32   2.3e-28       1     182 []     264     433 ..     264     433 .. 0.88

  Alignments for each domain:
  == domain 1  score: 99.7 bits;  conditional E-value: 5.1e-32
                 HHHHHHHHHHHHHHHHHHHHHHTHCCCHHCTCCHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHH.HHHTTSS-S-SHHHHHHHHSTHHHHHHHHHCHHH CS
      RhoGEF   1 vikElleTErsYvrdLkvlvevylkplselevlseeeikiiFsnieeilelhrsflleeLeerlkeseeqkeaqsigdvflkfadkfkkYseYcsnypn 99 
                 v++El++TEr+Yv+dL+ l     k+++++ v++ + i++iF ni+ il+++r+fl  ++e+ +   ++ ++ q+ g  f +f + f  Y+ +++n+ +
  KHJ32606.1 264 VVRELVDTERKYVQDLENLH-ELKKTIEQKGVIPGDLIHNIFLNINAILDFQRRFL-IKIETTN---SQPEKDQKWGLPFINFEEAFGIYQPFIANQRK 357
                 789****************5.6667888888*********************5555.5588877...667778999*********************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHTSGGGTT--HHHHTTHHHHHHHHHHHHHHHHHHTS-TTSHHHHHHHHHHHHHHHHHHHHH CS
      RhoGEF 100 alkllkelskknkkfkafleeaeerpecskldLeslLikPvqRlprYpLLLkellkntpeshpdyealkkaleaikevaseiN 182
                 + ++ k+      +f ++   a++   ++  +L+ +L+kP+qRl++YpLLLk+l  +t++++  +++l   +ea ++v++  N
  KHJ32606.1 358 SASIAKR------EFDKIS-LADHPVVVDFNTLDGFLLKPMQRLVKYPLLLKDLRDKTNANEATKNDLTLGIEAANRVLKLAN 433
                 *******......343333.34566777999********************************************99999877 PP

>> CDC24  CDC24 Calponin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.8   0.0   5.3e-30   2.4e-26       1      89 []     143     231 ..     143     231 .. 0.96

  Alignments for each domain:
  == domain 1  score: 91.8 bits;  conditional E-value: 5.3e-30
       CDC24   1 dPvtqlwkllrqGspLlalfNalkpeeklevdevksddlkvcKksvydFllac.kkeLgfedeelftisdlfsedttdlvkvlkvvnkvl 89 
                 dPv++lw++lr+G+pLl+++N+l+  e l++ ++++  +k++K + ++F++ac k +L+++  ++f + dlf++dtt++vkv++v+n vl
  KHJ32606.1 143 DPVSSLWRFLRKGTPLLTIYNCLQQPEILKL-DENMPVMKRPKIAAFKFVEAClKGDLQIPPGDCFSLQDLFGDDTTGFVKVTQVINIVL 231
                 9******************************.78999***************94469******************************997 PP

>> PB1  PB1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.1   1.4e-12   6.4e-09       3      73 ..     913     990 ..     911    1005 .. 0.86

  Alignments for each domain:
  == domain 1  score: 35.6 bits;  conditional E-value: 1.4e-12
                 EEEEEETTEEEEEEEEGSSS-HHHHHHHHHHHHTST......CCSEEEEEEETTSSEEEESSHHHHHHHHHHHHHT..S CS
         PB1   3 dlKlrygggirrelsvssnisfeeLrakvekrfkls......dedvklkYpdedgdlVtitsDeDLeealeearsl..k 73 
                 ++K+  +g  +  l v+ ni++++L++++  ++++       + +++l Y+ded d+Vti sD+D + a++e r++  +
  KHJ32606.1 913 KVKVNCDGNYVT-LVVAFNITYQSLIDRIDAKIGRFsnnaisQGTMRLRYRDEDEDFVTIESDDDIQIAFQEWRESqkQ 990
                 567777777777.89999****************999999*9*******************************998440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1008 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1098  (0.0612416); expected 358.6 (0.02)
Passed bias filter:                      539  (0.030063); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.74u 0.24s 00:00:00.98 Elapsed: 00:00:00.39
# Mc/sec: 7809.22
//
Query:       KHJ32607.1  [L=869]
Description: putative f-box wd-40 repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-30  104.8   1.6    0.00027   21.7   0.0    7.6  7  WD40         WD domain, G-beta repeat
    1.8e-14   53.4   2.6    4.4e-14   52.1   2.6    1.7  1  F-box-like   F-box-like
    1.8e-10   40.4   3.5    5.6e-10   38.8   1.7    2.4  2  F-box        F-box domain
    3.3e-08   33.7   1.0       0.66   10.3   0.0    4.5  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    1.6e-05   24.9   0.5         13    5.9   0.0    5.5  6  BBS2_Mid     Ciliary BBSome complex subunit 2, middle region
    0.00016   21.1   0.0     0.0018   17.7   0.0    2.3  2  WD40_like    WD40-like domain
     0.0077   16.1   0.1      0.023   14.6   0.1    1.8  1  F-box_4      F-box


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   1.1e-07   0.00027       8      38 .]     293     322 ..     287     322 .. 0.83
   2 !   16.3   0.0   5.1e-06     0.013       7      38 .]     333     367 ..     326     367 .. 0.80
   3 !   14.4   0.0   2.1e-05     0.055       8      38 .]     379     408 ..     371     408 .. 0.81
   4 !   16.2   0.0   5.5e-06     0.014       3      38 .]     454     488 ..     452     488 .. 0.76
   5 !   21.6   0.1   1.1e-07   0.00029       2      38 .]     493     528 ..     492     528 .. 0.93
   6 ?    0.2   0.0      0.65   1.7e+03       4      17 ..     535     549 ..     532     564 .. 0.70
   7 ?    4.9   0.0     0.021        53      25      37 ..     623     635 ..     598     636 .. 0.83

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 1.1e-07
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++H  +++ +  + +g++l+sGs+D+t+riW+
  KHJ32607.1 293 EAHnECIYTI--QYSGKYLVSGSRDKTIRIWN 322
                 5784458988..889****************8 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 5.1e-06
                 EESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 
                 l++H +sv +l+   +p  ++++sGs D t+ +W+
  KHJ32607.1 333 LRAHsGSVLCLQfdADPKEDLIVSGSSDATIVLWK 367
                 799*777****955666666699**99*******6 PP

  == domain 3  score: 14.4 bits;  conditional E-value: 2.1e-05
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 t+H  sv  +  + d++ l+++s+D+t++i++
  KHJ32607.1 379 TAHkESVLNV--QFDKRILVTCSKDRTIKIFN 408
                 4897779888..779999************97 PP

  == domain 4  score: 16.2 bits;  conditional E-value: 5.5e-06
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++ tl+GH   v++++ + +     s+s D+ +++W+
  KHJ32607.1 454 LIATLEGHvAAVNAVQIHGNEIV--SASGDRLIKVWN 488
                 6789****999****55555544..5544*******8 PP

  == domain 5  score: 21.6 bits;  conditional E-value: 1.1e-07
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +c+rtl GH +++ ++  + dg+ ++sGs D+ v+++d
  KHJ32607.1 493 TCVRTLVGHtKGIACV--QYDGRRIVSGSSDNEVKVFD 528
                 69*******999****..889999****99******98 PP

  == domain 6  score: 0.2 bits;  conditional E-value: 0.65
                 EEEEESSSS.EEEEE CS
        WD40   4 lrtltGHss.vtsla 17 
                 + +l+GHs+ v+ ++
  KHJ32607.1 535 VASLRGHSNlVRTVQ 549
                 6799***55697774 PP

  == domain 7  score: 4.9 bits;  conditional E-value: 0.021
                 EEEEETTSEEEEE CS
        WD40  25 lasGsdDgtvriW 37 
                 ++sGs+D t+ iW
  KHJ32607.1 623 IVSGSYDETIIIW 635
                 689********** PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.1   2.6   1.7e-17   4.4e-14       2      48 .]      78     123 ..      77     123 .. 0.97

  Alignments for each domain:
  == domain 1  score: 52.1 bits;  conditional E-value: 1.7e-17
  F-box-like   2 srLPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrrlvlr 48 
                  +LP+E+Ll I+s+L+p +Ll+ a+V+r+W ++ald  +LW++l+lr
  KHJ32607.1  78 EHLPNEVLLLILSFLDPISLLSTARVSRQWMSLALDS-RLWKQLYLR 123
                 79**********************************9.*******96 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0       0.3   7.7e+02      12      23 ..      50      61 ..      49      64 .. 0.86
   2 !   38.8   1.7   2.2e-13   5.6e-10       3      46 ..      77     120 ..      76     122 .. 0.94

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.3
                HHHHHTS-HHHH CS
       F-box 12 rhILerLplsdl 23
                 +I+++Lp+s +
  KHJ32607.1 50 INIISHLPTSQV 61
                59*******987 PP

  == domain 2  score: 38.8 bits;  conditional E-value: 2.2e-13
                 HHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHHH CS
       F-box   3 lsrLPsevlrhILerLplsdllalrrVSkgwrilidsdrlwcks 46 
                 +  LP+evl+ IL++L++++ll+ +rVS+ w +l  + rlw+  
  KHJ32607.1  77 FEHLPNEVLLLILSFLDPISLLSTARVSRQWMSLALDSRLWKQL 120
                 678**************************************875 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0   0.00063       1.6      32      90 ..     267     346 ..     247     348 .. 0.72
   2 !   10.3   0.0   0.00026      0.66       5      64 ..     349     406 ..     345     416 .. 0.57
   3 !    9.1   0.0   0.00063       1.6      47      81 ..     509     543 ..     471     551 .. 0.86
   4 ?   -1.9   0.0       1.7   4.2e+03      14      33 ..     627     646 ..     623     661 .. 0.74
   5 ?   -2.3   0.0       2.3   5.8e+03      15      60 ..     798     844 ..     794     855 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00063
  ANAPC4_WD40  32 l.......................eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhs.lsvksekavtclgWg 90 
                                          +e+++++ +  +++  +gk L+ +  d ++r+ + e+ ++v+  l+++s  +v cl++ 
   KHJ32607.1 267 QrrrleanwqlekyvnfqlpnpnhPEEAHNECIYTIQY--SGKYLVSGSRDKTIRIWNLETRRLVRPpLRAHSG-SVLCLQFD 346
                  44444444444556666666666666777777777766..69*********************99862666666.69999985 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00026
  ANAPC4_WD40   5 ptmDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrl 64 
                  p+ DLi  +++d  +++  ++  ++ +  +++++++v ++++  d ++L+   +d ++++
   KHJ32607.1 349 PKEDLIVSGSSDATIVLWKFSTGKIIQRLRTAHKESVLNVQF--DKRILVTCSKDRTIKI 406
                  555555555555555555555555555555555555544433..4455555555555555 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.00063
  ANAPC4_WD40  47 kpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  + dg+ ++ + sd+ev+++d e+g  v sl+ +s+
   KHJ32607.1 509 QYDGRRIVSGSSDNEVKVFDKETGLEVASLRGHSN 543
                  679*********************99999988776 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 1.7
  ANAPC4_WD40  14 tedgellvfRlngqrvwtle 33 
                  + d+ +++ R + + +w+ +
   KHJ32607.1 627 SYDETIIIWRRDKEGIWKSQ 646
                  678999***********983 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 2.3
  ANAPC4_WD40  15 edgellvfRlngqrvwtleedkedsevr.sLaWkpdgklLavaysdg 60 
                  ++++ lv+ ++ q+v +l+++  ++e++  ++ + d + ++   + +
   KHJ32607.1 798 TTNHSLVNQTSTQNVHNLPNQPINGEITrVFKLQFDARRIVCCSQTN 844
                  55566677778888888866666666652445666666665555555 PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.043   1.1e+02       6      29 ..     134     157 ..     132     173 .. 0.85
   2 ?    2.0   0.0     0.081   2.1e+02      12      30 ..     306     324 ..     298     329 .. 0.78
   3 !    5.9   0.0     0.005        13       4      66 ..     342     408 ..     339     411 .. 0.68
   4 ?    2.9   0.0     0.042   1.1e+02      10      31 ..     391     411 ..     384     419 .. 0.79
   5 ?   -3.7   0.0       4.9   1.3e+04      13      28 ..     473     488 ..     465     494 .. 0.79
   6 !    5.4   0.0    0.0072        18       8      31 ..     511     531 ..     504     549 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.043
    BBS2_Mid   6 dvdgdgeneLvvgsddfeirvfke 29 
                 d+ ++g n+++ gs d +i +f +
  KHJ32607.1 134 DIFEKGLNQIIDGSRDLDIDLFGN 157
                 7778999**************976 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.081
    BBS2_Mid  12 eneLvvgsddfeirvfkee 30 
                  ++Lv gs d +ir+++ e
  KHJ32607.1 306 GKYLVSGSRDKTIRIWNLE 324
                 479***********99765 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.005
    BBS2_Mid   4 ladvdgdgeneLvv.gsddfeirv..fkeeelvaeitetekvvsl.arlekerfayaleNGtvgvye 66 
                  +++d d +++L+v gs d +i +  f+ +++++ +++++k  +l ++ +k+ +++  +  t+++++
  KHJ32607.1 342 CLQFDADPKEDLIVsGSSDATIVLwkFSTGKIIQRLRTAHKESVLnVQFDKRILVTCSKDRTIKIFN 408
                 4588888888887758999999973355778888888777665552455555577777777777776 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.042
    BBS2_Mid  10 dgeneLvvgsddfeirvfkeee 31 
                 d ++ Lv +s+d +i++f++  
  KHJ32607.1 391 D-KRILVTCSKDRTIKIFNRSP 411
                 3.56899***********9865 PP

  == domain 5  score: -3.7 bits;  conditional E-value: 4.9
    BBS2_Mid  13 neLvvgsddfeirvfk 28 
                 ne+v +s d  i+v++
  KHJ32607.1 473 NEIVSASGDRLIKVWN 488
                 7999999999999876 PP

  == domain 6  score: 5.4 bits;  conditional E-value: 0.0072
    BBS2_Mid   8 dgdgeneLvvgsddfeirvfkeee 31 
                 dg   + +v gs d+e++vf++e+
  KHJ32607.1 511 DG---RRIVSGSSDNEVKVFDKET 531
                 44...489*************986 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   7.1e-07    0.0018       3     142 ..     299     445 ..     297     488 .. 0.74
   2 ?    0.9   0.0     0.089   2.3e+02      82     118 ..     502     538 ..     449     550 .. 0.61

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 7.1e-07
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvs.ivesfedSvifvkll...dddlilvvtlDGtillslleneeeven..ekieedistvkviddkl 95 
                 iY+i++   g++++ G++d+++++ +le+  +v   +   + Sv+  ++    ++dli+ ++ D ti+l +++ +++++   +  +e +  v+ ++  l
  KHJ32607.1 299 IYTIQY--SGKYLVSGSRDKTIRIWNLETRRLVRpPLRAHSGSVLCLQFDadpKEDLIVSGSSDATIVLWKFSTGKIIQRlrTAHKESVLNVQFDKRIL 395
                 9**999..899********************99835788999999877751114569999****************99972255677777787777777 PP

   WD40_like  96 liGtnkGsiyvfskdlqleevllgqsseIkei....kiennkiysLsesaf 142
                 +  ++  +i +f++   + +  +++s++ + +    ki nn+ +sLs++  
  KHJ32607.1 396 VTCSKDRTIKIFNRS-PMYIGNSNYSADAQTVnpvpKILNNYGFSLSSTSG 445
                 77788889*****99.67777777777777773334466999999998763 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.089
   WD40_like  82 eedistvkviddklliGtnkGsiyvfskdlqleevll 118
                    i++v++++ +++ G++  ++ vf+k+  le   l
  KHJ32607.1 502 TKGIACVQYDGRRIVSGSSDNEVKVFDKETGLEVASL 538
                 4567777777777777777777777777765555444 PP

>> F-box_4  F-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.1   8.8e-06     0.023       5      37 ..      77     109 ..      74     119 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 8.8e-06
     F-box_4   5 LssLPlevlqhiaslLDsfsLsqLslvskllre 37 
                 +++LP evl  i+s+LD +sL++ ++vs++   
  KHJ32607.1  77 FEHLPNEVLLLILSFLDPISLLSTARVSRQWMS 109
                 679*************************98655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (869 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.67u 0.24s 00:00:00.91 Elapsed: 00:00:00.41
# Mc/sec: 6321.09
//
Query:       KHJ32608.1  [L=427]
Description: putative domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-35  122.8   0.4    1.7e-35  122.3   0.4    1.2  1  DnaJ_C         DnaJ C terminal domain
    8.9e-24   83.4   4.9    1.5e-23   82.7   4.9    1.4  1  DnaJ           DnaJ domain
    1.9e-13   50.6  17.6    4.3e-13   49.4  17.6    1.6  1  DnaJ_CXXCXGXG  DnaJ central domain
    0.00042   20.2  11.4      0.062   13.3   1.4    2.4  2  Anti-TRAP      Tryptophan RNA-binding attenuator protein inhi
  ------ inclusion threshold ------
      0.037   13.3   4.6        2.1    7.5   0.2    2.3  2  DUF1356        Protein of unknown function (DUF1356)
       0.06   13.1   3.5       0.23   11.2   0.3    2.9  3  zf-CSL         CSL zinc finger
        3.7    7.6  12.6          8    6.5   1.7    2.3  2  HypA           Hydrogenase/urease nickel incorporation, metal
        8.8    6.5  11.3        4.1    7.6   2.9    2.3  2  DUF2318        Predicted membrane protein (DUF2318)


Domain annotation for each model (and alignments):
>> DnaJ_C  DnaJ C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.3   0.4   7.6e-39   1.7e-35       5     148 .]     132     351 ..     129     351 .. 0.95

  Alignments for each domain:
  == domain 1  score: 122.3 bits;  conditional E-value: 7.6e-39
                 EEE-HHHHHH-.EEE.EEEE............................................................................TEE CS
                 xxxxxxxxxxxxxxxxxxxxxxx.....................................................................xxxxxxx RF
      DnaJ_C   5 leisleelykGktkkikikrnvi.....................................................................kkekktl 34 
                  +++leely+Gkt k++ ++ vi                                                                     ++ekk+l
  KHJ32608.1 132 YKVTLEELYRGKTVKFASTKSVIcshckgsggkerakpvkcdrckgkgykfgltsvapntvaqamvtcdtcsgsgkffkekdqckkckgkqtVSEKKVL 230
                 79******************999********************************************************************988999** PP

                 EEEE-TT--TT-EEEETT-SSSS...S---EEEEEEE---SS-EEETTEEEEEEEEEHHHHHHT.EEEEEE-SS-E.EEE.....EE--TT-EEEETT- CS
                 xxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx.xxx.....xxxxxxxxxxxxxx RF
      DnaJ_C  35 evkipaGikdgqkirlegeGdeeg.gepGDlivtikvkphpvFkrkgndlyveveislaeallG.gklevptldgk.vkl.....kitqpgevlrikgk 125
                 e+ ip+G ++g++i+l+geGd+ + + pGD+i+t+ +++h++F+r +n+l  e++i+l+eal+G +++ ++ ldg+ +++     ki++pg+++++kg+
  KHJ32608.1 231 EIYIPRGSNTGDQIVLQGEGDQLPnQTPGDIIFTLFQEDHKIFSRFENHLSAEIHITLSEALTGfNRVVIRHLDGRgIRInhppgKIMRPGQTIKVKGE 329
                 *********************9999***********99**************************87788888955426668899999************ PP

                 S-EET...TEE--EEEEEEEE-- CS
                 xxxxxxxxxxxxxxxxxxxxxxx RF
      DnaJ_C 126 GmpklkkpgkrGdlyvevkvefP 148
                 Gmp++k ++++Gdl++ vkv+fP
  KHJ32608.1 330 GMPIKK-SDNKGDLFLFVKVDFP 351
                 *****8.***************9 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.7   4.9   6.7e-27   1.5e-23       1      63 []      10      74 ..      10      74 .. 0.94

  Alignments for each domain:
  == domain 1  score: 82.7 bits;  conditional E-value: 6.7e-27
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHH..HHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdp..eaeekFkeineAyevLsdpekRkqYD 63
                d+Y +Lg+s++as+++IkkaY+k al+yHPDk ++++  e+e+kFkein+Aye+L d+ekR+ YD
  KHJ32608.1 10 DLYGLLGISSNASKNQIKKAYHKAALQYHPDKATENNkkESEQKFKEINRAYEILYDDEKRQLYD 74
                79*****************************9966555799***********************9 PP

>> DnaJ_CXXCXGXG  DnaJ central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4  17.6   1.9e-16   4.3e-13       1      66 [.     155     221 ..     155     222 .. 0.87

  Alignments for each domain:
  == domain 1  score: 49.4 bits;  conditional E-value: 1.9e-16
  DnaJ_CXXCXGXG   1 CkkCkGsgakk.gkkktCktCkGsG.vvreeqktlgp.fvqqsqstCpeCeGtGkvikekdkCkkCkGk 66 
                    C++CkGsg k+ +k+ +C++CkG+G +   ++  ++p +v q   tC++C+G+Gk++kekd+CkkCkGk
     KHJ32608.1 155 CSHCKGSGGKErAKPVKCDRCKGKGyKFGLTS--VAPnTVAQAMVTCDTCSGSGKFFKEKDQCKKCKGK 221
                    ********998566999********5555544..56668889999***********************8 PP

>> Anti-TRAP  Tryptophan RNA-binding attenuator protein inhibitory protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   2.9   0.00011      0.24      12      41 ..     154     180 ..     151     185 .. 0.89
   2 !   13.3   1.4   2.7e-05     0.062      11      42 ..     197     224 ..     192     229 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00011
                 E-TTTTTTSEETTE......E-TTTTTSSE CS
   Anti-TRAP  12 kCdaCngsGkiepeeprasleCPkCsGkgl 41 
                  C +C+gsG  e +     ++C +C+Gkg 
  KHJ32608.1 154 ICSHCKGSGGKERA---KPVKCDRCKGKGY 180
                 6********99998...779********95 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 2.7e-05
                 EE-TTTTTTSEETTE......E-TTTTTSSEE CS
   Anti-TRAP  11 tkCdaCngsGkiepeeprasleCPkCsGkgli 42 
                 ++Cd+C gsGk   e      +C kC+Gk+ +
  KHJ32608.1 197 VTCDTCSGSGKFFKE----KDQCKKCKGKQTV 224
                 68*********9999....559******9865 PP

>> DUF1356  Protein of unknown function (DUF1356)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.2   0.00095       2.1      10      43 ..     130     163 ..     122     171 .. 0.76
   2 ?    7.4   0.2    0.0011       2.4      27      48 ..     191     212 ..     178     217 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00095
     DUF1356  10 ssekeskedvsqvpyveatgrdsvtCptCqGtGe 43 
                 +s k + e++ +  +v++++++sv+C  C+G+G 
  KHJ32608.1 130 QSYKVTLEELYRGKTVKFASTKSVICSHCKGSGG 163
                 4555555566666789****************95 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0011
     DUF1356  27 atgrdsvtCptCqGtGeiPreq 48 
                  +++ +vtC tC G+G+  +e+
  KHJ32608.1 191 TVAQAMVTCDTCSGSGKFFKEK 212
                 567889**********998876 PP

>> zf-CSL  CSL zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.14   3.1e+02      26      50 ..     128     158 ..     111     159 .. 0.79
   2 ?   11.2   0.3    0.0001      0.23      20      51 ..     171     203 ..     169     205 .. 0.85
   3 ?   -2.3   0.0       1.7   3.7e+03      20      37 ..     214     232 ..     213     247 .. 0.67

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.14
                 E...EEEEHHHHHTT.......--EEEETTS CS
      zf-CSL  26 e...Felteedleegae...gaevvvqCssC 50 
                 e   +++t+e+l +g++    +   v Cs C
  KHJ32608.1 128 EdqsYKVTLEELYRGKTvkfASTKSVICSHC 158
                 44479*********97798867777778888 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.0001
                 EE.TTSSE.EEEEHHHHHTT....--EEEETTSS CS
      zf-CSL  20 pC.RCgde.FelteedleegaegaevvvqCssCS 51 
                 +C RC+++ +++ +  +  + + a+ +v C++CS
  KHJ32608.1 171 KCdRCKGKgYKFGLTSVAPN-TVAQAMVTCDTCS 203
                 7********77777777664.679*********9 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 1.7
                 EE.TTSSEEEEEHHHHHTT CS
      zf-CSL  20 pC.RCgdeFelteedleeg 37 
                 +C  C+++  ++e+++ e+
  KHJ32608.1 214 QCkKCKGKQTVSEKKVLEI 232
                 5778888877777777665 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   1.7    0.0036         8      69      97 ..     151     180 ..     131     187 .. 0.77
   2 ?    6.2   3.5    0.0045        10      67      97 ..     193     223 ..     185     234 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0036
                 -EEEETTTS-EEECHHH.HHS-TTTSSS-E CS
        HypA  69 vkvrCreCgkefeleek.alrCpkCgsadv 97 
                  +v C++C+ ++ +e++  ++C +C++++ 
  KHJ32608.1 151 KSVICSHCKGSGGKERAkPVKCDRCKGKGY 180
                 4789*****999977744789****99876 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0045
                 E--EEEETTTS-EEECHHHHHS-TTTSSS-E CS
        HypA  67 vpvkvrCreCgkefeleekalrCpkCgsadv 97 
                  ++ v+C++C+ +++  +++ +C+kC+++++
  KHJ32608.1 193 AQAMVTCDTCSGSGKFFKEKDQCKKCKGKQT 223
                 57889******99995544568****99865 PP

>> DUF2318  Predicted membrane protein (DUF2318)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   1.4     0.023        52      36      58 ..     154     176 ..     126     182 .. 0.84
   2 ?    7.6   2.9    0.0018       4.1      17      60 ..     179     221 ..     176     231 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.023
     DUF2318  36 aCevCekkgYvqegeelvCknCg 58 
                 +C+ C+++g +++ + + C +C+
  KHJ32608.1 154 ICSHCKGSGGKERAKPVKCDRCK 176
                 79999999999999999999997 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0018
     DUF2318  17 evrflvvkksdgklrvaldaCevC.ekkgYvqegeelvCknCgvr 60 
                   +f +     ++++ a+ +C+ C ++ ++++e+++  Ck+C+ +
  KHJ32608.1 179 GYKFGLTSVAPNTVAQAMVTCDTCsGSGKFFKEKDQ--CKKCKGK 221
                 5566667777889999********655557777665..9999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1349  (0.0752412); expected 358.6 (0.02)
Passed bias filter:                      742  (0.0413855); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 3029.40
//
Query:       KHJ32609.1  [L=597]
Description: putative glutamyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.4e-97  324.7   0.0    5.6e-97  324.4   0.0    1.1  1  tRNA-synt_1c  tRNA synthetases class I (E and Q), catalytic d
  ------ inclusion threshold ------
       0.06   12.3   0.0        2.2    7.1   0.0    2.2  2  tRNA-synt_1f  tRNA synthetases class I (K)


Domain annotation for each model (and alignments):
>> tRNA-synt_1c  tRNA synthetases class I (E and Q), catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  324.4   0.0  6.3e-101   5.6e-97       3     302 ..      44     350 ..      42     362 .. 0.95

  Alignments for each domain:
  == domain 1  score: 324.4 bits;  conditional E-value: 6.3e-101
                   EEEE---SSSS-BHHHHHHHHHHHHHHHHTT-EEEEEE--SSCCC--HHHHHHHHHHHHHTT---S........SEEEEGGGGHHHHHHHHHHHHHT CS
  tRNA-synt_1c   3 rtRfaPePtGyLHiGhakaallnylfAknnnGkfilRieDTdperekeeaeesiledlkwlgikwd........ekptyqsdrfdelkkyaeeLikk 91 
                   rtRfaP+PtGy H+G+ ++al+n+l+Ak+++G+filRieDTd++r +++a+++i+edlkw gi+wd         +p++qsdr++ +++ a++Li++
    KHJ32609.1  44 RTRFAPSPTGYVHLGSLRTALFNFLIAKATGGQFILRIEDTDQKRTVPDAIQRIYEDLKWAGIHWDegpdsgghFGPYQQSDRLQLYREHANKLIES 140
                   8************************************************************************999********************* PP

                   TSEEEE-STHHHHHHHHCCSSHSS-TTTTS-HHHHHHHHHHHHHTTHSTTTS-EEEESSBTTSSGGGSSTEEEEEEESGGG.....SBTTTBTSTSE CS
  tRNA-synt_1c  92 GkAYvcectkeeleeereeqeklgskerdrydeenlklfeeemkkgkaegekavvRlkideessvefrDlvrgriklepqe.....ihdlvivksdi 183
                   G AY+c+ct+ ++e++  +q ++g  +++ryd+++++l  e  ++++a+g ++vvRlk + +++  f Dlv+g ik + ++     ++d ++ ksd+
    KHJ32609.1 141 GSAYRCYCTPTRIEALALTQAQQG--SSKRYDRCCAHLNLEISNEKAARGDSHVVRLKAPDQYP-SFSDLVYGFIKQKVKNvasnfFDDPILLKSDG 234
                   *****************9988888..79***********9999999*****************9.**********998877677778********** PP

                   EE-HHHHHHHHHHHTT-SEEEEEGGGGCCHHHHHHHHHHTT-S.-EEEEEE--EEETTSB-SHHHHHHHHHTTSSSSTT-TTSCBHHHHHHCTB-HH CS
  tRNA-synt_1c 184 yPtYdfavvidDaleeithvlrteefldntpkyiwllealglevppfiheylrlnlekkklSKRklsllvdekqvkewddlreallnflrrlGwtpe 280
                    PtY+fa vidD+ ++it+v+r+ e++++t+k+i+++ea+g+e+p+f h+ l+l ++++klSKRk s+   +  ++ +++ +eal nf+++lGw+ e
    KHJ32609.1 235 FPTYHFASVIDDHFMQITDVIRGAEWMSSTHKHIAIYEAFGWEPPKFSHVGLLLDESRRKLSKRKASME--IASLRSEGVFPEALTNFVALLGWSHE 329
                   *******************************************************************99..************************** PP

                   HHHHHHHHHCCCSSS.EEEEHH CS
  tRNA-synt_1c 281 kerelftreeliksfdlnresk 302
                    + ++++++eli++ +    +k
    KHJ32609.1 330 LQSDVMNMKELIENAS-MKFTK 350
                   *************994.33444 PP

>> tRNA-synt_1f  tRNA synthetases class I (K)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0   0.00024       2.2      32      84 ..      50      97 ..      25     137 .. 0.82
   2 ?    2.7   0.0    0.0052        47     249     288 ..     262     301 ..     254     326 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.00024
  tRNA-synt_1f 32 spSGliHiGnlrevltadlvaralrkrgeevrlilisDdmDglRkvpenlpek 84
                  sp G +H+G+lr  l   l+a+a        ++il ++d D+ R vp+ + + 
    KHJ32609.1 50 SPTGYVHLGSLRTALFNFLIAKATG-----GQFILRIEDTDQKRTVPDAIQRI 97
                  899*********9999999998865.....5799*************998765 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.0052
  tRNA-synt_1f 249 gSvdvsskiaeilggeaPekvvYelillkggekmssSkGn 288
                   +S++   +i e +g+e+P+     l+l++ ++k+s+ k  
    KHJ32609.1 262 SSTHKHIAIYEAFGWEPPKFSHVGLLLDESRRKLSKRKAS 301
                   4677777888*************************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (597 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.37
# Mc/sec: 4824.99
//
Query:       KHJ32610.1  [L=80]
Description: putative heat shock factor-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.4e-16   57.9   0.2    8.2e-16   57.6   0.2    1.1  1  HSBP1           Heat shock factor binding protein 1
  ------ inclusion threshold ------
      0.037   13.9   0.1       0.15   12.0   0.1    1.8  1  Matrilin_ccoil  Trimeric coiled-coil oligomerisation domain o
      0.093   12.8   0.1       0.11   12.5   0.1    1.1  1  DUF1664         Protein of unknown function (DUF1664)


Domain annotation for each model (and alignments):
>> HSBP1  Heat shock factor binding protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.2   1.4e-19   8.2e-16       2      45 ..      26      69 ..      25      74 .. 0.92

  Alignments for each domain:
  == domain 1  score: 57.6 bits;  conditional E-value: 1.4e-19
       HSBP1  2 eLtavVenlLqqlqdkFqtmsdqilsriDdMssriDdLEksiad 45
                e + vV++lL+ l++kF  +s++i+ ++D+Ms+r+D+LE+ +++
  KHJ32610.1 26 EFSVVVDDLLNTLSNKFAGVSSEIFAKMDEMSRRLDNLETALKN 69
                67889**********************************98876 PP

>> Matrilin_ccoil  Trimeric coiled-coil oligomerisation domain of matrilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   2.5e-05      0.15      18      43 ..      29      65 ..      23      67 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.5e-05
                    HHHHHHHHHHHHH...........HHHHHHHHHHHHH CS
  Matrilin_ccoil 18 tkVeseiqaLtqk...........LeavtkRlealEn 43
                      V++ +++L+ k            +++++Rl  lE 
      KHJ32610.1 29 VVVDDLLNTLSNKfagvsseifakMDEMSRRLDNLET 65
                    568999999999888888888888***********96 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   1.9e-05      0.11      41      83 ..      33      75 ..      30      80 .] 0.90

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.9e-05
     DUF1664 41 davesvskqleqvseslaatkrhLssridrvdkkldeqkeisk 83
                d ++++s++   vs+++ a  +++s+r+d++++ l++++ + k
  KHJ32610.1 33 DLLNTLSNKFAGVSSEIFAKMDEMSRRLDNLETALKNNTSADK 75
                77899******************************99887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (80 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1039  (0.0579508); expected 358.6 (0.02)
Passed bias filter:                      679  (0.0378716); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 593.94
//
Query:       KHJ32611.1  [L=854]
Description: putative ring finger ubiquitin ligase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-10   40.8   1.9      4e-10   39.8   1.9    1.5  1  zf-rbx1       RING-H2 zinc finger domain
    3.1e-08   33.8   5.4    3.7e-08   33.6   1.4    2.3  2  zf-RING_2     Ring finger domain
    1.7e-06   27.8   2.8    3.9e-06   26.6   2.8    1.7  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    3.5e-06   26.9   1.5    7.4e-06   25.8   1.5    1.6  1  zf-RING_5     zinc-RING finger domain
    4.4e-06   26.4   7.8    8.1e-06   25.6   1.9    2.4  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    6.1e-05   22.8   1.5    0.00014   21.6   1.5    1.7  1  Prok-RING_4   Prokaryotic RING finger family 4
    0.00016   21.6   2.4    0.00042   20.3   0.4    2.6  2  zf-RING_UBOX  RING-type zinc-finger
    0.00028   20.5   7.4     0.0065   16.2   0.2    3.3  3  zf-RING_11    RING-like zinc finger
     0.0022   17.8   1.3     0.0022   17.8   1.3    2.2  2  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.014   15.5   0.3      0.033   14.2   0.3    1.6  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
      0.036   13.7   0.6        0.1   12.2   0.6    1.7  1  Zn_ribbon_17  Zinc-ribbon, C4HC2 type
        2.2    8.5   5.5         10    6.4   5.5    2.2  1  FANCL_C       FANCL C-terminal domain


Domain annotation for each model (and alignments):
>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.8   1.9   2.7e-13     4e-10       2      55 .]     787     848 ..     786     848 .. 0.94

  Alignments for each domain:
  == domain 1  score: 39.8 bits;  conditional E-value: 2.7e-13
     zf-rbx1   2 tCaiCrneleeacieckapgdee........cpvvlGeCgHaFHlhCiskWlktrkvCPlcr 55 
                 +CaiC ++le + ie++++ +++           ++  C+H FH  C++ W++ r +CP+cr
  KHJ32611.1 787 DCAICMQTLEVPIIEVDKDTTTSsvagilesKRYMVTPCRHIFHSMCLEGWMRFRLQCPICR 848
                 6*****************9999999***998777888************************8 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1      0.26   3.8e+02       2      12 ..     787     797 ..     786     807 .. 0.84
   2 !   33.6   1.4   2.5e-11   3.7e-08      14      44 .]     818     848 ..     811     848 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.26
   zf-RING_2   2 eCpICleelss 12 
                 +C+IC++ l+ 
  KHJ32611.1 787 DCAICMQTLEV 797
                 6****998865 PP

  == domain 2  score: 33.6 bits;  conditional E-value: 2.5e-11
   zf-RING_2  14 dsvlllpCgHvfhreClerwlrssstCPlCr 44 
                 ++++++pC+H+fh  Cle w+r + +CP+Cr
  KHJ32611.1 818 KRYMVTPCRHIFHSMCLEGWMRFRLQCPICR 848
                 5566779***********************9 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   2.8   2.6e-09   3.9e-06       1      41 []     788     847 ..     788     847 .. 0.98

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 2.6e-09
                 -TTT-S--SS-E......................E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn.....................elleCkHsfCskCirkilksrkkvkCPlC 41 
                 C+iC+++++ p                      ++++C+H f+s+C++ +++     +CP+C
  KHJ32611.1 788 CAICMQTLEVPIievdkdtttssvagileskryMVTPCRHIFHSMCLEGWMR--FRLQCPIC 847
                 ****************************************************..8899**** PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   1.5     5e-09   7.4e-06       2      43 ..     788     848 ..     787     849 .. 0.86

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 5e-09
   zf-RING_5   2 CnkCfekl...................skeekfyltsCgHifCekClkkllekeavCpiCr 43 
                 C +C++ l                    +++++++t+C Hif++ Cl   +  + +CpiCr
  KHJ32611.1 788 CAICMQTLevpiievdkdtttssvagiLESKRYMVTPCRHIFHSMCLEGWMRFRLQCPICR 848
                 88888888888888888877777777777888*******************99*******9 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.4     0.032        47       2      12 ..     788     798 ..     787     802 .. 0.86
   2 !   25.6   1.9   5.4e-09   8.1e-06      13      40 .]     820     847 ..     815     847 .. 0.94

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.032
  zf-C3HC4_2   2 CpiCldmlkdp 12 
                 C+iC++ l+ p
  KHJ32611.1 788 CAICMQTLEVP 798
                 ********988 PP

  == domain 2  score: 25.6 bits;  conditional E-value: 5.4e-09
  zf-C3HC4_2  13 svvtpCgHvfCqkCilrsLeekneCPlC 40 
                  +vtpC H f+++C+  +++   +CP+C
  KHJ32611.1 820 YMVTPCRHIFHSMCLEGWMRFRLQCPIC 847
                 589************************* PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   1.5   9.5e-08   0.00014       8      40 ..     817     851 ..     788     854 .] 0.84

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 9.5e-08
  Prok-RING_4   8 ekkailepCgHlvCkeCfdsk.dls.sCPlCqrri 40 
                   k  ++ pC H++   C++++  +  +CP+C++++
   KHJ32611.1 817 SKRYMVTPCRHIFHSMCLEGWmRFRlQCPICRENL 851
                  577899***************655589*****986 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.4   2.8e-07   0.00042       1      39 []     788     845 ..     788     845 .. 0.87
   2 ?    3.3   0.4     0.057        86       1      11 [.     844     852 ..     844     854 .] 0.85

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 2.8e-07
  zf-RING_UBOX   1 CpIClelft.....................dP.lvlpCGHtFCreClwelskslegafkCP 39 
                   C IC+++++                     +  +v+pC H+F++ Cl     + + +++CP
    KHJ32611.1 788 CAICMQTLEvpiievdkdtttssvagilesKRyMVTPCRHIFHSMCL---EGWMRFRLQCP 845
                   9********9999999999999988888652267789**********...89999999999 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.057
  zf-RING_UBOX   1 CpIClelftdP 11 
                   CpIC+e +  P
    KHJ32611.1 844 CPICRENL--P 852
                   ******88..4 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.5    0.0037       5.6       1      10 [.     787     796 ..     787     799 .. 0.89
   2 !   16.2   0.2   4.4e-06    0.0065      11      29 .]     816     834 ..     812     834 .. 0.85
   3 ?   -0.7   0.1       0.8   1.2e+03       1       8 [.     843     850 ..     843     853 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0037
  zf-RING_11   1 eCsICLeefk 10 
                 +C+IC+++++
  KHJ32611.1 787 DCAICMQTLE 796
                 8******987 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 4.4e-06
  zf-RING_11  11 pgqalfilpCsHtFHfkCI 29 
                 ++++ +++pC H+FH+ C+
  KHJ32611.1 816 ESKRYMVTPCRHIFHSMCL 834
                 56778999**********5 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.8
  zf-RING_11   1 eCsICLee 8  
                 +C IC e+
  KHJ32611.1 843 QCPICREN 850
                 7****876 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.7       1.3     2e+03       4      11 ..     787     794 ..     782     800 .. 0.68
   2 !   17.8   1.3   1.5e-06    0.0022      13      46 ..     818     850 ..     815     852 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.3
                 B-TTTSSS CS
  zf-C3HC4_3   4 eCviCler 11 
                  C iC+++
  KHJ32611.1 787 DCAICMQT 794
                 47777665 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 1.5e-06
                 S-EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B CS
  zf-C3HC4_3  13 rnvvllpCgHlvlCeeCaekllkrkkkCpiCrrp 46 
                 +  ++ pC+H+ + + C+e +++ + +CpiCr++
  KHJ32611.1 818 KRYMVTPCRHI-FHSMCLEGWMRFRLQCPICREN 850
                 667889*****.99******************86 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.3   2.2e-05     0.033      49      80 ..     822     850 ..     804     852 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.2e-05
                 EBTTS-EEEHHHHHHHHHHHSTSSB-TTTSSB CS
  zf-ANAPC11  49 lGkckhnfhlhcilkwletetskglcpmcrqt 80 
                 +  c+h+fh  c+  w+     + +cp+cr++
  KHJ32611.1 822 VTPCRHIFHSMCLEGWMRF---RLQCPICREN 850
                 567*************975...689*****86 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.6   6.8e-05       0.1      19      46 ..     820     845 ..     813     847 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6.8e-05
  Zn_ribbon_17  19 vlcgvCeHvlHasCarewfenddlaeCp 46 
                   ++ + C H+ H+ C++ w       +Cp
    KHJ32611.1 820 YMVTPCRHIFHSMCLEGWMRFRL--QCP 845
                   45677*************88777..676 PP

>> FANCL_C  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   5.5    0.0069        10       4      42 ..     787     839 ..     784     851 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0069
                 S-SSS--SS-......TT-----B--...S-TT.....----B-SGGGHHHHH CS
     FANCL_C   4 eCgiCyayrl......dsgevpdisC...dnek.....CnkkfHsaCLkeWlr 42 
                 +C iC+          d+++++  +    + ++     C ++fHs+CL+ W+r
  KHJ32611.1 787 DCAICMQTLEvpiievDKDTTTSSVAgilESKRymvtpCRHIFHSMCLEGWMR 839
                 67777665555666664444444332111222233333*************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (854 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1002  (0.0558871); expected 358.6 (0.02)
Passed bias filter:                      679  (0.0378716); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.72u 0.31s 00:00:01.03 Elapsed: 00:00:00.47
# Mc/sec: 5486.27
//
Query:       KHJ32612.1  [L=371]
Description: putative protein disulfide-isomerase erp38 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.3e-60  199.4   0.3    2.3e-29  101.4   0.0    2.2  2  Thioredoxin    Thioredoxin
    1.1e-24   87.1   3.1    1.9e-24   86.4   0.2    2.4  2  ERp29          Endoplasmic reticulum protein ERp29, C-termina
    4.7e-17   62.4   0.0    2.1e-09   37.8   0.0    2.4  2  Thioredoxin_2  Thioredoxin-like domain
    3.8e-16   59.3   0.1    4.7e-07   29.5   0.0    2.1  2  OST3_OST6      OST3 / OST6 family, transporter family
    5.3e-13   49.0   0.1    7.3e-06   26.1   0.0    2.4  2  Thioredoxin_7  Thioredoxin-like
    1.8e-09   37.8   0.0     0.0013   19.0   0.0    3.2  3  Thioredoxin_8  Thioredoxin-like
    3.7e-09   36.6   0.3     0.0014   18.5   0.0    2.3  2  AhpC-TSA       AhpC/TSA family
    1.5e-06   28.0   0.0     0.0084   15.9   0.0    2.4  2  Thioredoxin_9  Thioredoxin
    2.2e-06   27.7   0.0     0.0062   16.4   0.0    2.2  2  TraF           F plasmid transfer operon protein
    2.4e-06   27.6   2.7     0.0068   16.3   0.0    3.7  4  Thioredoxin_6  Thioredoxin-like domain
    3.8e-06   26.7   0.5      0.068   12.9   0.0    2.3  2  Redoxin        Redoxin
    0.00022   21.1   0.1       0.12   12.3   0.0    2.8  2  HyaE           Hydrogenase-1 expression protein HyaE
  ------ inclusion threshold ------
      0.011   16.0   2.0        4.2    7.7   0.1    2.9  2  Glutaredoxin   Glutaredoxin
      0.087   11.5   0.0       0.13   10.9   0.0    1.1  1  EVC2_like      Ellis van Creveld protein 2 like protein
        0.1   12.8   4.1         35    4.5   0.1    3.9  4  Thioredoxin_4  Thioredoxin


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.4   0.0     2e-32   2.3e-29       3     102 ..      28     130 ..      26     131 .. 0.93
   2 !   96.1   0.1   8.4e-31     1e-27       2     102 ..     147     251 ..     146     252 .. 0.92

  Alignments for each domain:
  == domain 1  score: 101.4 bits;  conditional E-value: 2e-32
                  EESSHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTT...TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTE.EEEEEESS-HHHH CS
  Thioredoxin   3 lvltkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkd...kvklakvdvdenedlakkyevegiPtlklfkngk.evkkyegarekek 96 
                  + l  +nF++   +  k+vlveF+ApwCghCkalaP++e+la++++    k+++akvd+d++++l k+++++g+Pt+k+f   + ++++y+g+r+ e+
   KHJ32612.1  28 VDLIPDNFDNITLS-GKPVLVEFFAPWCGHCKALAPVWEQLAQDFAFareKIVIAKVDADAEKTLMKRFNIQGFPTIKFFDGKNnTPEDYKGGRDLES 124
                  6677899**99998.9****************************987778******************************987779************ PP

                  HHHHHH CS
  Thioredoxin  97 laaflk 102
                  l +f++
   KHJ32612.1 125 LSNFVT 130
                  **9987 PP

  == domain 2  score: 96.1 bits;  conditional E-value: 8.4e-31
                  EEESSHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTT..TSEEEEEETTTS..HHHHHHTT-SSSSEEEEEETTE.EEEEEESS-HH CS
  Thioredoxin   2 vlvltkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkd..kvklakvdvden..edlakkyevegiPtlklfkngk.evkkyegarek 94 
                  vl+l++++F+ee++  +k+v+v F+ApwCghCk+laP +ek+a++++   +v++akvd++++  +++ak+ +v+++Pt+k+f +g  e++ y+g+r++
   KHJ32612.1 147 VLILNDNTFKEEING-DKDVIVAFTAPWCGHCKSLAPIWEKVANDFALesNVVIAKVDAEAEnsKTTAKDQGVSSYPTIKFFAKGTsEPELYNGGRTE 243
                  78899**********.*****************************99888********9764116799******************99********** PP

                  HHHHHHHH CS
  Thioredoxin  95 eklaaflk 102
                  +++++fl+
   KHJ32612.1 244 NDFVTFLN 251
                  ****9987 PP

>> ERp29  Endoplasmic reticulum protein ERp29, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.81   9.7e+02       9      49 ..     183     223 ..     175     236 .. 0.74
   2 !   86.4   0.2   1.6e-27   1.9e-24       1      96 []     269     361 ..     269     361 .. 0.99

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.81
       ERp29   9 laaefvaaakaereelleeakkaaeklksekekkaaeyYvk 49 
                 + +++++  + e + +++++ ++ae+ k +++++ ++ Y +
  KHJ32612.1 183 IWEKVANDFALESNVVIAKVDAEAENSKTTAKDQGVSSYPT 223
                 55555555556668899999999999998888888888854 PP

  == domain 2  score: 86.4 bits;  conditional E-value: 1.6e-27
       ERp29   1 GrieeldelaaefvaaakaereelleeakkaaeklksekekkaaeyYvkvmekiaekgeeyvekElkRLekllkkgklaaekkdelkkrlNILsaF 96 
                 G+ie+ld+l+++f++ +  + ee+  e++ka++ l++++++ +a+yY+k+++k+a+ + +++++El+RL+k+l+kg l +ek+de+++++NIL++F
  KHJ32612.1 269 GTIETLDSLVSKFIDGS--NLEEITTEVTKAVKGLEKNRTNLYADYYLKIFQKLATAD-DFATNELARLSKILQKGGLVPEKQDEFTSKTNILRKF 361
                 9**************99..************************************999.***********************************99 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.0   1.8e-12   2.1e-09       4      99 ..      41     119 ..      38     128 .. 0.76
   2 !   22.2   0.0   1.2e-07   0.00015       6     105 ..     163     246 ..     158     250 .. 0.74

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 1.8e-12
  Thioredoxin_2   4 ngkpvlvvftdpdCpyCkklkkelkel.ddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtivfldgk.eivarlp 97 
                    +gkpvlv f +p+C+ Ck+l  + ++l +d+ +           ++++++++ ++ek            l+++++++g+Pti f+dgk +  + ++
     KHJ32612.1  41 SGKPVLVEFFAPWCGHCKALAPVWEQLaQDFAFA--------REKIVIAKVDADAEK-----------TLMKRFNIQGFPTIKFFDGKnNTPEDYK 117
                    69********************888883333333........334555555555555...........6*******************97777777 PP

  Thioredoxin_2  98 Gy 99 
                    G 
     KHJ32612.1 118 GG 119
                    76 PP

  == domain 2  score: 22.2 bits;  conditional E-value: 1.2e-07
  Thioredoxin_2   6 kpvlvvftdpdCpyCkklkkelkel.ddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtivfldgk.eivarlpGy 99 
                    k v+v ft+p+C+ Ck l    +++ +d+        l+++   ++++++ ++e +         +  a+  gv++ Pti f+ +   + + + G 
     KHJ32612.1 163 KDVIVAFTAPWCGHCKSLAPIWEKVaNDFA-------LESN--VVIAKVDAEAENS---------KTTAKDQGVSSYPTIKFFAKGtSEPELYNGG 240
                    89***************9997777744443.......4455..6666666666554.........679999********99777776666777777 PP

  Thioredoxin_2 100 vpaeel 105
                     +++++
     KHJ32612.1 241 RTENDF 246
                    777666 PP

>> OST3_OST6  OST3 / OST6 family, transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.0   8.5e-10     1e-06      46     140 ..      54     136 ..      48     146 .. 0.88
   2 !   29.5   0.0   3.9e-10   4.7e-07      10     139 ..     144     256 ..     135     260 .. 0.84

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 8.5e-10
   OST3_OST6  46 CelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlllfppkkgpkeskkkdtydfsrggfdaealakfisertgvk 140
                 C  C+ ++p +e++a+ +       ++k++ akvd d  k ++++++++  P + +f  k  ++    +++y+   gg d e+l +f++e+ gv 
  KHJ32612.1  54 CGHCKALAPVWEQLAQDFAFA----REKIVIAKVDADAEKTLMKRFNIQGFPTIKFFDGK--NN---TPEDYK---GGRDLESLSNFVTEKSGVR 136
                 99*******************....58******************************992..23...556665...6889*********999865 PP

  == domain 2  score: 29.5 bits;  conditional E-value: 3.9e-10
   OST3_OST6  10 sngviklndenykellkgprdysvvvllTatspqfkCelCrefepefelvakswrkdekskskklfFakvdfde..gkdvFqklglnsaPhlllfppkk 106
                 s++v+ lnd+++ke ++g++   v+v +Ta      C  C+ ++p +e+va+ +  +     ++++ akvd +   +k + ++ g++s P + +f    
  KHJ32612.1 144 SSQVLILNDNTFKEEINGDK--DVIVAFTAP----WCGHCKSLAPIWEKVANDFALE-----SNVVIAKVDAEAenSKTTAKDQGVSSYPTIKFFAK-- 229
                 26899***********8665..59******9....7*******************99.....69*******954448899999************98.. PP

   OST3_OST6 107 gpkeskkkdtydfsrggfdaealakfisertgv 139
                 g        + ++ +gg + +++++f++++tg+
  KHJ32612.1 230 GT------SEPELYNGGRTENDFVTFLNKKTGT 256
                 33......34566668899999******99985 PP

>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   6.1e-09   7.3e-06      15      82 ..      40     107 ..      31     108 .. 0.82
   2 !   20.6   0.0   3.1e-07   0.00037      17      82 ..     162     228 ..     153     229 .. 0.84

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 6.1e-09
                    HHT--EEEEE--TT-HHHHHHHHHHHH-.HHHHH.HHHT-EEEEESS--S-GGG.-TT---SSEEEEE- CS
  Thioredoxin_7  15 ergkpvlvffgaswcftCqalerdflsd.eevkaalaekfvllrvdvterdanileldeqgvPvvafld 82 
                     +gkpvlv f a wc++C+al+ + ++  +++ a ++ek+v  +vd + ++  + ++  qg+P++ f+d
     KHJ32612.1  40 LSGKPVLVEFFAPWCGHCKALAPVWEQLaQDF-AFAREKIVIAKVDADAEKTLMKRFNIQGFPTIKFFD 107
                    589******************98887773444.4377**********9999866444459*******98 PP

  == domain 2  score: 20.6 bits;  conditional E-value: 3.1e-07
                    T--EEEEE--TT-HHHHHHHHHHHH-HHHHH.HHHT-EEEEESS--S-GGG.-TT---...SSEEEEE- CS
  Thioredoxin_7  17 gkpvlvffgaswcftCqalerdflsdeevkaalaekfvllrvdvterdanileldeqg...vPvvafld 82 
                     k+v+v f+a wc++C+ l+   +++  ++ al +++v  +vd + ++ ++ + d+ g   +P++ f+ 
     KHJ32612.1 162 DKDVIVAFTAPWCGHCKSLAP-IWEKVANDFALESNVVIAKVDAEAENSKTTAKDQ-GvssYPTIKFFA 228
                    589****************75.788888888999**********998888845454.4456***99985 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   1.1e-06    0.0013       1      51 [.      42      93 ..      42      95 .. 0.89
   2 ?    5.9   0.0     0.013        16      66      93 ..      83     110 ..      76     112 .. 0.81
   3 !   12.6   0.0   0.00011      0.13       4      60 ..     165     217 ..     161     231 .. 0.84

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.1e-06
                   .SEEEEEE--SSSHHHHHHHHHHHHHHHHHHH.TTSEEEEEEE-SS-HHHHH CS
  Thioredoxin_8  1 gkvvlLyfgaswcppckaftpklkelyeklkk.kkkveivyvsldkkeeefe 51
                   gk vl+ f+a wc +cka  p   +l +++   + k++i  v  d ++  ++
     KHJ32612.1 42 GKPVLVEFFAPWCGHCKALAPVWEQLAQDFAFaREKIVIAKVDADAEKTLMK 93
                   699***************************9779999999999998766555 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.013
                    E-TT-HHHHTT-S--TT-SEEEEE-TT- CS
  Thioredoxin_8  66 fddkkrnklkkkynvkaiPtlvvldkng 93 
                    +d +  ++l k++n++++Pt+   d ++
     KHJ32612.1  83 VDADAEKTLMKRFNIQGFPTIKFFDGKN 110
                    5667799*************98888544 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 0.00011
                    EEEEE--SSSHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SS-HHHHHHHGGGS-TT CS
  Thioredoxin_8   4 vlLyfgaswcppckaftpklkelyeklkkkkkveivyvsldkkeeefekylkknkkp 60 
                    v++ f a wc +ck   p   ++ +++      ++v  ++d + e+ + + k++   
     KHJ32612.1 165 VIVAFTAPWCGHCKSLAPIWEKVANDFA--LESNVVIAKVDAEAENSKTTAKDQ--G 217
                    899************************9..888888888898888888877777..4 PP

>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   1.2e-06    0.0014      23     108 ..      40     123 ..      33     139 .. 0.79
   2 !   15.9   0.1   7.6e-06    0.0091      16      81 ..     153     217 ..     138     227 .. 0.71

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 1.2e-06
                 HTTSEEEEEEESTST-CCHHHHHHHHHHCHHHCC..CTTEEEEEEESSSCHHHHHHHHH-H.SSEEEE-TTSHHHHHTT-EETTTTEC CS
    AhpC-TSA  23 ykgkpvvlffypkdwcpvCttelpalaklyeefk..ergvevigvsvdspeshkkfiekeslnfpllsDeegkvakaygvlkeekgla 108
                 ++gkpv++ f++  wc +C++ +p  ++l+++f+   +++ +  v +d ++++ k  + ++++   + D ++++ ++y+  ++     
  KHJ32612.1  40 LSGKPVLVEFFAP-WCGHCKALAPVWEQLAQDFAfaREKIVIAKVDADAEKTLMKRFNIQGFPTIKFFDGKNNTPEDYKGGRDL---E 123
                 69***********.*****************99853445566667778888999999999999999999999999999877554...4 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 7.6e-06
                 EEEECHHHTT.SEEEEEEESTST-CCHHHHHHHHHHCHHHCCCTTEEEEEEESSSCH.HHHHHHHH-H CS
    AhpC-TSA  16 etvslsdykg.kpvvlffypkdwcpvCttelpalaklyeefkergvevigvsvdspe.shkkfiekes 81 
                 +t++ ++++g k v++ f++  wc +C+  +p  +k++++f+ +  +v++  vd ++ ++k ++++++
  KHJ32612.1 153 NTFK-EEINGdKDVIVAFTAP-WCGHCKSLAPIWEKVANDFA-LESNVVIAKVDAEAeNSKTTAKDQG 217
                 4555.6677768888899888.********************.4455555555444426777777766 PP

>> Thioredoxin_9  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0   0.00056      0.67      48      94 ..      49      99 ..      38     116 .. 0.80
   2 !   15.9   0.0     7e-06    0.0084      35     105 ..     156     228 ..     123     237 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00056
                   E--TT-HHHHHHHHHHHHHHH....H-TTEEEEEE-HHHHHHHTTTTTT-S CS
  Thioredoxin_9 48 ltedwCgDaavnvPvlakiae....lnpnievkillrdenlelmdqyltng 94
                   + ++wCg + +  Pv +++a+    + ++i +  +  d+++ lm+++  +g
     KHJ32612.1 49 FFAPWCGHCKALAPVWEQLAQdfafAREKIVIAKVDADAEKTLMKRFNIQG 99
                   5689***********999886333367899999999999999999997654 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 7e-06
                    HHHT--S-EEEEEE--TT-HHHHHHHHHHHHHHHH-TTEEEEEE-HHHHHHHT..TTTTT.-SS--SSEEEEE- CS
  Thioredoxin_9  35 kiksiekklkilvltedwCgDaavnvPvlakiaelnpnievkillrdenlelm..dqylt.ngaraiPtliild 105
                    k++   +k  i+++t++wCg +    P+ +k+a+    +e ++++ + + e    +   + +g  + Pt+ ++ 
     KHJ32612.1 156 KEEINGDKDVIVAFTAPWCGHCKSLAPIWEKVANDF-ALESNVVIAKVDAEAEnsKTTAKdQGVSSYPTIKFFA 228
                    4444445556899********************888.7887777765555444114444457777777776665 PP

>> TraF  F plasmid transfer operon protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   5.2e-06    0.0062     128     203 ..      41     110 ..      39     114 .. 0.84
   2 !    9.1   0.0    0.0009       1.1     133     203 ..     166     231 ..     159     236 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 5.2e-06
        TraF 128 akeygLlfFyrgkcpyceaqapilqafadkyglevraVsvdgrplpelpnarvdkgqaarlgvkrtPalvlvdpks 203
                 +++  L+ F+++ c+ c+a+ap+ +++a+++ ++   + + +   +       +k  ++r++++ +P++ ++d k+
  KHJ32612.1  41 SGKPVLVEFFAPWCGHCKALAPVWEQLAQDFAFAREKIVIAKVDAD------AEKTLMKRFNIQGFPTIKFFDGKN 110
                 56667899*************************9999988777442......3568889*********98888775 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0009
        TraF 133 LlfFyrgkcpyceaqapilqafadkyglevraVsvdgrplpelpnarvdkgqaarlgvkrtPalvlvdpks 203
                 ++ F ++ c+ c+ +api +++a+++ le  +V          +n   +k  a+  gv++ P++ ++ + +
  KHJ32612.1 166 IVAFTAPWCGHCKSLAPIWEKVANDFALESNVVIAKVDAE--AEN---SKTTAKDQGVSSYPTIKFFAKGT 231
                 6789999*********************988876554433..445...77899999999999998877766 PP

>> Thioredoxin_6  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   5.7e-06    0.0068      80     183 ..      28     130 ..      20     131 .. 0.79
   2 !   13.9   0.2   3.2e-05     0.039      30      75 ..      88     133 ..      87     204 .. 0.89
   3 !    7.8   0.1    0.0024       2.8      10      74 ..     182     253 ..     175     255 .. 0.80
   4 ?   -1.9   0.1       2.3   2.7e+03      83     122 ..     283     322 ..     276     340 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 5.7e-06
                    EE-SHHHHHHHHTSS--EEEEEEE-TTSTTHHHHHHHH.HHHHHHT...TTT-EEEEEETTGGHHHHHHTT--GGG-SEEEEEESSSS-EEEET.. CS
  Thioredoxin_6  80 reltpenaeelfeeglppllllflkkddeeteklkkai.ekvakef...kdkinfaladaksfkrpleylglsssdlPvivivdsashkykypp.. 169
                      l p+n+++++ +g+p+l+ +f +    ++ k+++ + e++a++f   + ki +a +da++ k ++++++++    P+i ++d ++ +  +p   
     KHJ32612.1  28 VDLIPDNFDNITLSGKPVLVEFFAP--WCGHCKALAPVwEQLAQDFafaREKIVIAKVDADAEKTLMKRFNIQ--GFPTIKFFDGKN-N--TPEdy 116
                    5566899999999999999999997..4678777777779999999999999*********9999*****999..999999999333.3..33224 PP

                    TSS--HHHHHHHHH CS
  Thioredoxin_6 170 kdefspeklkeFlk 183
                    k+  + e+l  F++
     KHJ32612.1 117 KGGRDLESLSNFVT 130
                    77777777777775 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 3.2e-05
                    -HHHHHHTT--S.SEEEEEETTTTEEEEEETHT--HHHHHHHHHHH- CS
  Thioredoxin_6  30 skevadklgvke.pavllfrkfdeekvkydgekitvddlkkfiekns 75 
                    +k +++ +++++ p++++f ++++ +++y+g   + ++l++f++++s
     KHJ32612.1  88 EKTLMKRFNIQGfPTIKFFDGKNNTPEDYKGG-RDLESLSNFVTEKS 133
                    5779999************************9.8*********9986 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0024
                    HHHHHHTTT-T.TSEEEEE--HH.......HHHHTT--S.SEEEEEETTTTEEEEEETHT--HHHHHHHHHHH CS
  Thioredoxin_6  10 eiFekvakelkgdvrfgvtkske.......vadklgvke.pavllfrkfdeekvkydgekitvddlkkfiekn 74 
                     i ekva+++  +  +++ k ++        a++ gv++ p++++f k ++e++ y+g   t +d ++f++k+
     KHJ32612.1 182 PIWEKVANDFALESNVVIAKVDAeaensktTAKDQGVSSyPTIKFFAKGTSEPELYNGG-RTENDFVTFLNKK 253
                    5778888888888666666654445666657777999999******************9.7999999999987 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 2.3
                    SHHHHHHHHTSS--EEEEEEE-TTSTT..HHHHHHHHHHHHH CS
  Thioredoxin_6  83 tpenaeelfeeglppllllflkkddee..teklkkaiekvak 122
                    +  n+ee+++e  +   +  l+k+++    ++++k+++k+a+
     KHJ32612.1 283 DGSNLEEITTEVTK--AVKGLEKNRTNlyADYYLKIFQKLAT 322
                    56677777777766..44444444444223678888888775 PP

>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   5.7e-05     0.068      20     102 ..      34     117 ..      22     135 .. 0.71
   2 !   11.9   0.2   0.00011      0.13      20      71 ..     152     204 ..     137     229 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 5.7e-05
                 EEEHHHHTTSEEEEEEESTTT-HHHHHTHHHHHTHHHHHHCSTTTEEEEEESSSHH..HHHHHHHTT-TSEEEE-TTSHHHHHTT CS
     Redoxin  20 svslsefkgkkvvvnfvpgafcPtCsaehpyleklaellkekgvdvvavvadndaf..vkefwgkeglkfpvlsDgsaaftkalG 102
                 +++   + gk+v+v f++  +c+ C+a +p  e+la+ ++    ++v+  +d da    ++  + +g + + + Dg+ +  ++++
  KHJ32612.1  34 NFDNITLSGKPVLVEFFAP-WCGHCKALAPVWEQLAQDFAFAREKIVIAKVDADAEktLMKRFNIQGFPTIKFFDGKNNTPEDYK 117
                 556666899**********.**********9999977766555555554444444445333333366666667777776666665 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00011
                 EEEHHH.HTTSEEEEEEESTTT-HHHHHTHHHHHTHHHHHHCSTTTEEEEEES CS
     Redoxin  20 svslse.fkgkkvvvnfvpgafcPtCsaehpyleklaellkekgvdvvavvad 71 
                 + + +e  +g k v++++++ +c+ C+  +p  ek+a+ ++ + + v+a v +
  KHJ32612.1 152 DNTFKEeINGDKDVIVAFTAPWCGHCKSLAPIWEKVANDFALESNVVIAKVDA 204
                 444555578999899999999**********9999977766665555554433 PP

>> HyaE  Hydrogenase-1 expression protein HyaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0    0.0001      0.12      52      93 ..      66     109 ..      57     113 .. 0.83
   2 ?    5.6   0.0     0.013        15      63      94 ..     200     231 ..     183     236 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.0001
                 HHHCT-TTS-EEEEEE..THHHHHHHHHCCT-TSSSEEEEEETT CS
        HyaE  52 EllkaFpnalraavva..dreqeealaerfgvlktPsllflrdg 93 
                  l + F  a + +v+a  d + e++l +rf+++ +P++ f+ ++
  KHJ32612.1  66 QLAQDFAFAREKIVIAkvDADAEKTLMKRFNIQGFPTIKFFDGK 109
                 678888877777777768999******************99876 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.013
                 EEEEETHHHHHHHHHCCT-TSSSEEEEEETTE CS
        HyaE  63 aavvadreqeealaerfgvlktPsllflrdge 94 
                 a v a+ e++++ a+  gv+ +P++ f+++g 
  KHJ32612.1 200 AKVDAEAENSKTTAKDQGVSSYPTIKFFAKGT 231
                 334457899999*****************986 PP

>> Glutaredoxin  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.1    0.0035       4.2       6      57 ..      51     108 ..      38     110 .. 0.68
   2 ?    7.0   0.2    0.0055       6.6       1      15 [.     166     180 ..     166     226 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0035
                   STSSHHHHHHHHHHHHTT....GGEEEEEGCCSH.HHHHHHHHHHTSSSSSEEE.ETT CS
  Glutaredoxin   6 kptCpyCkkakrlLkelg....vkfeeidvdkde.eireelkelsgvrtvPqvf.idg 57 
                    p+C++Ck+   + ++l     ++ e i + k + ++ + l+++ +++ +P++  +dg
    KHJ32612.1  51 APWCGHCKALAPVWEQLAqdfaFAREKIVIAKVDaDAEKTLMKRFNIQGFPTIKfFDG 108
                   39*******9765555553322555666666654478888999999999999952466 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0055
                   EEEEESTSSHHHHHH CS
  Glutaredoxin   1 vvlftkptCpyCkka 15 
                   +v ft p+C++Ck  
    KHJ32612.1 166 IVAFTAPWCGHCKSL 180
                   688*********976 PP

>> EVC2_like  Ellis van Creveld protein 2 like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00011      0.13     156     230 ..     293     365 ..     283     370 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00011
   EVC2_like 156 sllradadLeacRiqimkdviallLknlslsgelsrqvekrlssvfkkqllalekelkeeyerkmvaLaaecnle 230
                  +++a   Le++R++++ d     +++l+  +    +  +rls++++k  l  ek+  +e+  k   L + ++ e
  KHJ32612.1 293 EVTKAVKGLEKNRTNLYADYYLKIFQKLATADDFATNELARLSKILQKGGLVPEKQ--DEFTSKTNILRKFIKKE 365
                 46788999****************************************98888776..99999998888877666 PP

>> Thioredoxin_4  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1     0.029        35      14      40 ..      43      69 ..      40      88 .. 0.87
   2 ?   -0.3   0.0      0.88     1e+03     127     157 ..      86     116 ..      79     124 .. 0.74
   3 ?    3.9   0.1     0.044        53      14      40 ..     163     189 ..     160     199 .. 0.84
   4 ?    2.8   0.1       0.1   1.2e+02     113     145 ..     193     225 ..     185     251 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.029
                   SEEEEEEE-TT-HHHHHHHHHHHHHHH CS
  Thioredoxin_4 14 pvtvieyedlrCphCakfeeeveklle 40
                   + +++e+    C hC++++   e+l +
     KHJ32612.1 43 KPVLVEFFAPWCGHCKALAPVWEQLAQ 69
                   5789************99888777765 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.88
                    HHHHHHHHHHT--SS-EEEE.TTEEE-TT--H CS
  Thioredoxin_4 127 eaeskeakkagiestPtfii.ngekveepqty 157
                     ae++ +k+ +i++ Pt+   +g++ + p +y
     KHJ32612.1  86 DAEKTLMKRFNIQGFPTIKFfDGKNNT-PEDY 116
                    4566777999*******9764666544.5555 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.044
                    SEEEEEEE-TT-HHHHHHHHHHHHHHH CS
  Thioredoxin_4  14 pvtvieyedlrCphCakfeeeveklle 40 
                    + ++++++   C hC+ ++   ek+ +
     KHJ32612.1 163 KDVIVAFTAPWCGHCKSLAPIWEKVAN 189
                    789*************98877766655 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.1
                    HTS-------HHHHHHHHHHHHHHT--SS-EEE CS
  Thioredoxin_4 113 feacleeekldalveaeskeakkagiestPtfi 145
                    +e+++   k+da++e+ +++ak +g++s Pt+ 
     KHJ32612.1 193 LESNVVIAKVDAEAENSKTTAKDQGVSSYPTIK 225
                    5666667789999******************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.45
# Mc/sec: 2465.85
//
Query:       KHJ32613.1  [L=536]
Description: putative wd repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.8e-12   46.8   0.8    4.3e-12   45.6   0.8    1.7  1  NUC153       NUC153 domain
    2.4e-05   25.0   0.1        1.7    9.6   0.0    4.7  5  WD40         WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.026   14.8   0.0       0.18   12.1   0.0    2.4  2  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
      0.085   13.5   0.0       0.27   11.9   0.0    1.9  1  CBFB_NFYA    CCAAT-binding transcription factor (CBF-B/NF-YA)


Domain annotation for each model (and alignments):
>> NUC153  NUC153 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6   0.8   9.5e-16   4.3e-12       1      29 []     497     525 ..     497     525 .. 0.98

  Alignments for each domain:
  == domain 1  score: 45.6 bits;  conditional E-value: 9.5e-16
      NUC153   1 DpRFkalFedhdFaIDptspeFkktnpmk 29 
                 D+RF++lFed++F++D+ s+eF+++np++
  KHJ32613.1 497 DSRFGKLFEDEEFEVDEKSREFQALNPST 525
                 9**************************96 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.011        51      13      33 ..      58      78 ..      47      80 .. 0.76
   2 ?   -3.0   0.0       3.9   1.7e+04      32      38 .]     226     232 ..     226     232 .. 0.92
   3 !    9.6   0.0   0.00039       1.7       5      38 .]     240     274 ..     236     274 .. 0.84
   4 ?    3.1   0.0     0.044     2e+02      19      38 .]     301     319 ..     287     319 .. 0.72
   5 ?    0.6   0.0      0.28   1.3e+03      12      28 ..     334     350 ..     327     358 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.011
                EEEEEEETTSSEEE.EEETTSE CS
        WD40 13 vtslafspdgawla.sGsdDgt 33
                + ++++s dg w++ +G++++ 
  KHJ32613.1 58 I-CVRVSEDGEWIMsTGTYKPQ 78
                6.999*******9736666665 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.9
                 SEEEEEE CS
        WD40  32 gtvriWd 38 
                 gtv +Wd
  KHJ32613.1 226 GTVEFWD 232
                 79****9 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.00039
                 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 ++l+  +  +t+l f+ +g  +++Gs +g + i+d
  KHJ32613.1 240 GILSQNNEeITALNFNASGLSIVTGSSKGIIQIFD 274
                 667766445****************99*****998 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.044
                 ETTSSEEEEEETTSEEEEEE CS
        WD40  19 spdgawlasGsdDgtvriWd 38 
                 s+  + ++s++  + +++Wd
  KHJ32613.1 301 SSGEKKILSAD-QRVIKLWD 319
                 44445566666.*******9 PP

  == domain 5  score: 0.6 bits;  conditional E-value: 0.28
                 SEEEEEEETTSSEEEEE CS
        WD40  12 svtslafspdgawlasG 28 
                 +++s+a+++++ +l+++
  KHJ32613.1 334 DINSVAWCKSSGMLVTA 350
                 49*****9999999986 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0     4e-05      0.18       8      70 ..     217     278 ..     209     343 .. 0.84
   2 ?   -1.5   0.0       0.7   3.1e+03      35      54 ..     329     348 ..     307     355 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4e-05
  ANAPC4_WD40   8 DLiAlatedgellvfRl.ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesg 70 
                  +L+A++t+ g ++     + +rv  l  +++++e+++L+++ +g  ++ + s+g ++++d    
   KHJ32613.1 217 NLLAFGTSIGTVEFWDPrSKERVGIL--SQNNEEITALNFNASGLSIVTGSSKGIIQIFDLRRP 278
                  56777777777766544144555555..78999**************************98765 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.7
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLa 54 
                   ++   ++s+aW ++  +L+
   KHJ32613.1 329 IEPTVDINSVAWCKSSGMLV 348
                  44555566666665555555 PP

>> CBFB_NFYA  CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   5.9e-05      0.27       3      33 ..     468     499 ..     466     523 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 5.9e-05
   CBFB_NFYA   3 lyVNakQynrIlkRReaRakleaelkl.rkar 33 
                 + VN+k  ++IlkR e+R+k++ e+ +   +r
  KHJ32613.1 468 VKVNQKLVDKILKRQERREKIDLEDGIlGDSR 499
                 67*******************99655434333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1098  (0.0612416); expected 358.6 (0.02)
Passed bias filter:                      603  (0.0336327); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.40
# Mc/sec: 3976.27
//
Query:       KHJ32614.1  [L=342]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2512.20
//
Query:       KHJ32615.1  [L=473]
Description: putative betaine aldehyde dehydrogenase 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.8e-122  407.5   0.0     7e-122  407.2   0.0    1.0  1  Aldedh    Aldehyde dehydrogenase family
  ------ inclusion threshold ------
      0.052   12.6   0.1       0.18   10.8   0.1    1.9  1  LuxC      Acyl-CoA reductase (LuxC)


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  407.2   0.0  7.8e-126    7e-122       9     461 ..      13     466 ..       5     467 .. 0.97

  Alignments for each domain:
  == domain 1  score: 407.2 bits;  conditional E-value: 7.8e-126
                 EEEEETTTCEEEEEEE-B-HHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH. CS
      Aldedh   9 ievinPatgeviakvpaataedvdaavaaAkeafkawaklpaeeRaeiLrkaadlleerkeelaeletletGkplaearaeveeaidvlryyaelaek. 106
                 +  i+P t+e++a  + at+ed ++a + A++ f +++k++++eR++i+++  ++le+rk+ la+ +t ++G p++ +++e++ a++ ++y  +  e+ 
  KHJ32615.1  13 VVAISPLTNEPVAIRKCATEEDNQRASRLARDSFLSFSKTSLAERQQIIKNSLRILEARKDVLAQELTEQMGRPISYTAKEISTAVNRAEYLLKISEDv 111
                 6689**********************************************************************************************5 PP

                 HSEEEEEECTTEEEEEEEEE-SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHTTS-TTSEEE--SSTCCHHHHHHH-TT CS
      Aldedh 107 legevlpssegklalvrrePlGvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeeaglPkgvlnvvtgsgsevgealvehpe 205
                 l+++  + ++g + ++++ P+G v++   WN+P l+++ +l+pal+aGN+++l P+ + p +a ++  +f+e glP++v+++++ +  + +  l+++ +
  KHJ32615.1 112 LQDTPGEAEKGFKRYIKKLPVGPVLIFFTWNYPYLILINSLVPALLAGNSIILSPSMRIPTIAERISSIFNESGLPNNVIQYLNYKTLDGATSLIRDMR 210
                 5555555579***************************************************************************************** PP

                 ESEEEEES-HHHHHHHHHHHHCTTSEEEEEE---EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHT--BS-TTST CS
      Aldedh 206 vdkvsftGstevgrkiakaaaknlkrvtlElGGknplivledaDldkaveaivkgafgnaGQvCiaasrllvqesiydefveklveaakklkvgdplde 304
                 + ++ ftGs++ g  i+k aa+++  v lElGGk+p+ v +d+D+  ++e+iv ga++n+GQ C++++r++v+e+i+d+f+e++++ +++  +gdp+++
  KHJ32615.1 211 ISHICFTGSVASGITIQKLAAERIVSVGLELGGKDPAYVRSDVDIAWVAEEIVDGAIFNSGQSCCSIERVYVNEKIHDKFIEAIQKVLSNYVMGDPFKK 309
                 *************************************************************************************************** PP

                 T-SB---SSHHHHHHHHHHHHHHHHTTSEEEE-TT.E.SB-SSSTTEE--EEEES-TTTSHHHHS---SSEEEEEEESSHHHHHHHHHSSSEESEEEEE CS
      Aldedh 305 dtdvGPliseaqlekvekyveeakeegaklllGge.reeaglekgyfvePtvlanvtpdmriaqeEiFGPVlsvikfkdeeeaieiaNdteyGLaagvf 402
                 +t++GP++s+++ e +e+++++a ++gak  +  + + ++ +  g+fv+Pt+l+nvt+dm i++eE+FGPV++v+k++d++ea++++Nd+++GL+a+++
  KHJ32615.1 310 ETNIGPVVSKQSKELIESHINDALQKGAKDSTPENeTFKTFPPLGNFVKPTLLTNVTHDMVIMKEETFGPVIPVMKVNDDAEAVQLMNDSDFGLTASIW 408
                 ********************************77768899999******************************************************** PP

                 -SBHHHHHHHHHHS-SSEEEESSSST--TTTSEB--CGGGEES-BSHHHHHHHTEEEEE CS
      Aldedh 403 tkdleraervaerleaGnvyiNdsttgaaealpfgGvkqSglGreggkegleeytevkt 461
                 t+d ++  ++a++++aG+v +N+    +++  +++G+k+Sg G + +k g+++++++k+
  KHJ32615.1 409 TADTKKGAELAQKVDAGTVFVNRCDFPSPDL-AWTGWKNSGKGVTLSKFGFDQFVKLKS 466
                 ************************9999999.***********************9996 PP

>> LuxC  Acyl-CoA reductase (LuxC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1     2e-05      0.18      81     138 ..     121     181 ..     105     322 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 2e-05
        LuxC  81 e..ksyekaqprglvlhvlsgNvpllp.vmsilqglLvknvnllkvSssdpflaaallksl 138
                 +  k+y+k  p g vl ++  N p l+ + s++ +lL++n ++l +S+  p +a ++   +
  KHJ32615.1 121 KgfKRYIKKLPVGPVLIFFTWNYPYLIlINSLVPALLAGNSIILSPSMRIPTIAERISSIF 181
                 34579*******************7762679****************99999888776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (473 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       583  (0.0325172); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3379.78
//
Query:       KHJ32616.1  [L=117]
Description: hypothetical protein EV44_g4652 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.18s 00:00:00.56 Elapsed: 00:00:00.35
# Mc/sec: 999.60
//
Query:       KHJ32617.1  [L=115]
Description: hypothetical protein EV44_g3609 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.18s 00:00:00.53 Elapsed: 00:00:00.33
# Mc/sec: 1045.99
//
Query:       KHJ32618.1  [L=510]
Description: putative abhydrolase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.7e-20   72.0   0.0      1e-18   67.9   0.0    2.3  2  Abhydrolase_1    alpha/beta hydrolase fold
    6.3e-17   61.6   0.0    2.2e-16   59.9   0.0    1.8  2  Hydrolase_4      Serine aminopeptidase, S33
    1.3e-13   52.1   0.0    3.1e-12   47.6   0.0    2.6  2  Abhydrolase_6    Alpha/beta hydrolase family
    8.9e-06   25.5   0.0    3.6e-05   23.5   0.0    2.0  2  Esterase         Putative esterase
    4.6e-05   22.9   0.0    8.3e-05   22.0   0.0    1.4  1  DUF915           Alpha/beta hydrolase of unknown function (DU
    0.00038   19.5   0.0    0.00056   18.9   0.0    1.2  1  Chlorophyllase2  Chlorophyllase enzyme
     0.0004   20.0   0.0     0.0039   16.8   0.0    2.1  2  LIDHydrolase     Lipid-droplet associated hydrolase
     0.0014   18.5   0.0          1    9.2   0.0    2.7  3  Ser_hydrolase    Serine hydrolase
     0.0025   17.6   0.0     0.0077   16.0   0.0    1.7  2  PGAP1            PGAP1-like protein
  ------ inclusion threshold ------
      0.011   14.8   0.0      0.016   14.3   0.0    1.2  1  Chlorophyllase   Chlorophyllase
      0.013   15.6   0.1      0.071   13.2   0.1    2.3  1  Thioesterase     Thioesterase domain
      0.031   14.2   0.0        0.4   10.6   0.0    2.1  2  BAAT_C           BAAT / Acyl-CoA thioester hydrolase C termin
      0.039   13.7   0.0      0.099   12.4   0.0    1.6  2  Abhydrolase_5    Alpha/beta hydrolase family
      0.055   13.3   0.0        3.9    7.2   0.0    2.6  3  Abhydrolase_2    Phospholipase/Carboxylesterase
      0.064   13.1   0.0       0.16   11.8   0.0    1.7  1  Abhydrolase_3    alpha/beta hydrolase fold
       0.11   11.9   0.0       0.21   11.0   0.0    1.4  1  DUF99            Protein of unknown function DUF99


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.9   0.0   9.1e-22     1e-18       3     107 ..     124     241 ..     122     318 .. 0.88
   2 ?    1.9   0.0      0.13   1.4e+02     206     237 ..     400     456 ..     334     484 .. 0.61

  Alignments for each domain:
  == domain 1  score: 67.9 bits;  conditional E-value: 9.1e-22
                    EEEE-STTTCGGGGTTGHHHHHHHHT.TSEEEEEEETTSTTSSSTTTGB.........CHHSHHHHHHHHHHHHHHCTTSSEEEEEETHHHHHHHH CS
  Abhydrolase_1   3 lvilhGlpgssdvwaerglapaLakd.gfdvillDlrGvgySspapacin........ddygtasvaddldrildalgddkltlvGhSmGGmiala 89 
                    lv+lhG++++++ +++   +++L++  g+ +++lD++G g+Ss++p  i+         + + + + d l+  + + +++k+tl+GhSmGG +a a
     KHJ32618.1 124 LVMLHGYGAGLGFFYK--NFEGLSRVkGWKIYALDMLGMGRSSRPPFRIHakdqvgkiREAESW-FIDALEEWRIKRKLEKFTLLGHSMGGYMAIA 216
                    8***************..999999989************************9888888667888.88888877888889***************** PP

                    HHHHHGGGEEEEEEESE.......C CS
  Abhydrolase_1  90 yaaeyperVkalvllga.......i 107
                    ya++yp ++++l+l ++        
     KHJ32618.1 217 YALKYPGHINKLILASPvgipehpY 241
                    *****************88665332 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.13
                    C..............THHHHS.EEEEEEETTCSSSCHHHHHHHHHC..........H CS
  Abhydrolase_1 206 e..............lknvla.ptlvisgtsDplvppkaledlaql..........l 237
                                   +++ +  p+++++g++D+++  + l   ++l           
     KHJ32618.1 400 TtdadpdrsdskpnnFHKETGfPIIFMYGENDWMDVAGGLAAEQKLkeekakiletA 456
                    044444434444333233333599999999999999988888888744444444440 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.9   0.0     2e-19   2.2e-16       4     118 ..     121     242 ..     118     298 .. 0.74
   2 ?   -1.3   0.0      0.96   1.1e+03     190     204 ..     419     433 ..     410     454 .. 0.79

  Alignments for each domain:
  == domain 1  score: 59.9 bits;  conditional E-value: 2e-19
  Hydrolase_4   4 kavvvlvHGlaehsgryaelaeaLaa.qGfavyalDhrGhGrse..gkrghvpsfddyvdDlaafvekvkeehpel....plfllGhSmGGliallyl 94 
                  ++ +v++HG++   g + + +e L + +G+++yalD  G Grs   + r h ++    ++ +++ +  + ee++ +    +++llGhSmGG++a++y+
   KHJ32618.1 121 EQNLVMLHGYGAGLGFFYKNFEGLSRvKGWKIYALDMLGMGRSSrpPFRIHAKDQVGKIREAESWFIDALEEWRIKrkleKFTLLGHSMGGYMAIAYA 218
                  6789********************9768****************9977777777666677777765444444444445679***************** PP

  Hydrolase_4  95 lrypdkvaglilsaPalkikaklk 118
                  l+yp ++++lil++P+  +++++ 
   KHJ32618.1 219 LKYPGHINKLILASPVGIPEHPYA 242
                  ***************987777653 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.96
  Hydrolase_4 190 itlPllllhGeaDkv 204
                    +P+++++Ge+D+ 
   KHJ32618.1 419 TGFPIIFMYGENDWM 433
                  349**********85 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       3.8   4.2e+03     143     158 ..      40      55 ..      21     119 .. 0.47
   2 !   47.6   0.0   2.8e-15   3.1e-12       1     219 [.     124     490 ..     124     491 .. 0.51

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 3.8
                    CHCHCCCGHHHHCCHH CS
  Abhydrolase_6 143 awrarlarlaallagl 158
                    aw+++   ++a + ++
     KHJ32618.1  40 AWQWWSNLAPAIAEHR 55 
                    3333333333222211 PP

  == domain 2  score: 47.6 bits;  conditional E-value: 2.8e-15
                    EEEE--GC.....GC..HHHHHHHHCCTCEEEEE--TTSTS-GGCS--HHH......CHHH.HHHHCCTT.......TTSEEEEEETCHHHHHHHH CS
  Abhydrolase_6   1 vlllHGagssassWl..vapLaallaagvhvlapDlpGhGrsdpppldled......ladl.aalldelaa.....gggpvvlvGHSlGGalalaa 82 
                    +++lHG g++ + ++  +  L +  +  +  +a+D  G+Grs++pp+   +      +++  + ++d+l +        ++ l+GHS+GG++a a 
     KHJ32618.1 124 LVMLHGYGAGLGFFYknFEGLSRVKGWKI--YALDMLGMGRSSRPPFRIHAkdqvgkIREAeSWFIDALEEwrikrKLEKFTLLGHSMGGYMAIA- 216
                    79***977775556434556644333337..***************88877444444455566688888889877777888**************. PP

                    HHCC.......EE.EEES-............................................................................. CS
  Abhydrolase_6  83 apla.....lvvg.vlldp............................................................................. 95 
                      +a      + + +l +p                                                                             
     KHJ32618.1 217 --YAlkypgHINKlILASPvgipehpyathndisepkksaltqeftesqdetarskisnkseaeekyefrsqpseqptketasapvqrklpkwfsy 310
                    ..7777667333357777788888888888888888888888888888888888888888888888888777666554444444333332222222 PP

                    .........----TTTS----TTHHHHHHTT-CCCCHCCH......S-HSCCCCHHHCCCCHCHCCCGHH........................HH CS
  Abhydrolase_6  96 .......pptalpagllaaalelllallallrllawlsre......plprlfladedadaawrarlarla........................al 154
                           p           ++++  +l+++l+  +w+sr+      + ++ +++     +++    +r++                        + 
     KHJ32618.1 311 lwdanisP---------FSVIRWTGPLGPRLV-SGWSSRRfshlphSESEALHE-----YTYSLFRQRGSgeyalayilapgafardpiirrihK- 390
                    22222220.........222222222222222.244433222222211112222.....222222222223333322222222222222222220. PP

                    CCHHCHTTCCHHTT-TTGC...............................EEE..CTT-C...................HHHHCHHCCCH..STTE CS
  Abhydrolase_6 155 laglgllpaaawadlpvpl...............................lvl..ggeDp...................lvprllerlla..qaga 196
                                      +                               +++  g++D                    ++    e+  +    +a
     KHJ32618.1 391 ------------------VgrqelppkttdadpdrsdskpnnfhketgfpIIFmyGENDWmdvagglaaeqklkeekakILETASEEERRkeNGSA 468
                    ..................222222222222233333333333333333332223223333444444333333333333422222444444566777 PP

                    EETCE...SSS-HHHHSH.HHHHH CS
  Abhydrolase_6 197 rlpvvlpgaGHlphleep.devae 219
                    ++ +++ +aGH+++l +  +e++e
     KHJ32618.1 469 KV-ITINNAGHHLYL-DGwEEFNE 490
                    77.999999999999.77688876 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   3.2e-08   3.6e-05     117     153 ..     202     238 ..     191     299 .. 0.75
   2 ?   -1.6   0.1       1.5   1.7e+03     191     228 ..     438     475 ..     428     496 .. 0.68

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 3.2e-08
                 EEEEEETHHHHHHHHHHHCSTTTCCEEEEES--S-CC CS
    Esterase 117 ravaGqSmGGlgALilalkhpdrFgsvssfSpivnps 153
                  +++G+SmGG++A+ +alk+p++    +  Sp+  p 
  KHJ32618.1 202 FTLLGHSMGGYMAIAYALKYPGHINKLILASPVGIPE 238
                 6899*******************99999999875444 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.5
                 CTTBCCCHTSCHHHHHHHHHHHCCHHHHCCCCCCTT-S CS
    Esterase 191 Gtseddlgeqlsveilevlarnrelkeqlaargveged 228
                 G  +++  ++ +++ile++++++++ke  +a+ ++ ++
  KHJ32618.1 438 GLAAEQKLKEEKAKILETASEEERRKENGSAKVITINN 475
                 55555566788999999999999999888777776655 PP

>> DUF915  Alpha/beta hydrolase of unknown function (DUF915)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   7.4e-08   8.3e-05      66     124 ..     164     221 ..     159     274 .. 0.89

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 7.4e-08
      DUF915  66 knPiikvgfednrdaslkkqakwlkkvlseLkkkYnikkfnavGhSmGglaltsYleey 124
                  +P  ++  +d+  +++ + + w+  +l+e + k +++kf ++GhSmGg  ++ Y+ +y
  KHJ32618.1 164 SRPPFRIHAKDQV-GKIREAESWFIDALEEWRIKRKLEKFTLLGHSMGGYMAIAYALKY 221
                 5666777777777.8*****************************************999 PP

>> Chlorophyllase2  Chlorophyllase enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0     5e-07   0.00056      59     134 ..     172     241 ..     124     259 .. 0.80

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 5e-07
  Chlorophyllase2  59 dakeiksaakvlnWlakgLesvlpeevepdlsklalsgHSrGgktafalalgkaktslkfsaligvdPvagasksk 134
                        +++ ++++   W+ + Le   +  ++ +l+k++l gHS Gg++a+a al++     +++ li   Pv   ++  
       KHJ32618.1 172 AKDQVGKIREAESWFIDALE---EWRIKRKLEKFTLLGHSMGGYMAIAYALKYPG---HINKLILASPVGIPEHPY 241
                      348899999999*******9...679999***********************998...788888888887655544 PP

>> LIDHydrolase  Lipid-droplet associated hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   3.5e-06    0.0039      14     119 ..     134     233 ..     124     239 .. 0.70
   2 ?    0.6   0.0      0.29   3.3e+02     182     236 ..     374     432 ..     331     458 .. 0.58

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 3.5e-06
  LIDHydrolase  14 lveFYetFlsllseklnpelevlgishaGfeleeee.keakenekvfsLedQiehkedflkellek.aksekdvklilvGHSvGaYialevlkrlse 108
                   l  FY++F   ls    + +++++  + G+  +++   +++ +++v ++++     +d l+    + + ++k  k+ l+GHS G Y+a+  + +++ 
    KHJ32618.1 134 LGFFYKNFEG-LSRV--KGWKIYALDMLGMGRSSRPpFRIHAKDQVGKIREAESWFIDALE----EwRIKRKLEKFTLLGHSMGGYMAIAYALKYPG 223
                   5567777744.4444..47888888888888777772333444444444444444444444....34568999*****************9999999 PP

  LIDHydrolase 109 rsikkvvlLfP 119
                   + i+k++l  P
    KHJ32618.1 224 H-INKLILASP 233
                   8.999888766 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.29
  LIDHydrolase 182 ttlkfvkspevvrqalhlakdEm..eeikeddeeedvllkknkeka...lvfyfgkkDhW 236
                    +   + +  ++r++ + +++E+  ++ ++d ++ d+  ++ ++++   ++f++g++D W
    KHJ32618.1 374 LAPGAFARDPIIRRIHKVGRQELppKTTDADPDRSDSKPNNFHKETgfpIIFMYGEND-W 432
                   4444555666777788888888732334444444444444444444788999999999.5 PP

>> Ser_hydrolase  Serine hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.0    0.0089        10      88     150 ..      68     130 ..      62     132 .. 0.89
   2 !    9.2   0.0   0.00091         1      44      94 ..     188     242 ..     170     271 .. 0.73
   3 ?   -2.2   0.0       2.9   3.3e+03     141     166 ..     467     492 ..     456     494 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0089
                    T--SGGS..TT.GGGCGCTTS-SSHHCCHCEEEEETTBTTC-HHHHHHHHHHCT-EEEEETT- CS
  Ser_hydrolase  88 apadveeeaaklaelaefaplpreklpfpslvvaSenDpyvsfeeaeelaeawgaelvdlgea 150
                    +p ++ ++++ ++ l +++    ++ ++ ++vv S nD  ++    e+++e+++ +lv+l   
     KHJ32618.1  68 SPTNPGSSKTIPEDLGTANDPYGQRVRYSNIVVLSGNDRSLNEFSVERMGENIEQNLVMLHGY 130
                    788888888899999999999999*******************************99998765 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00091
                    HHHHH.HHHC-STTEEEEEETCHHHHHHHHHHHTTSSSEEEEEEET--SGG....S CS
  Ser_hydrolase  44 aalea.aveaaeekvvlvAHSlgclavlhaaelqlakkvagalLVapadve....e 94 
                    +ale+  +++  ek +l+ HS+g  +++++a l+ + ++++ +L +p  +     +
     KHJ32618.1 188 DALEEwRIKRKLEKFTLLGHSMGGYMAIAYA-LKYPGHINKLILASPVGIPehpyA 242
                    555542466777889***************9.***************998533330 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2.9
                    T-EEEEETT-TTSSGGGT-SS-HHHH CS
  Ser_hydrolase 141 gaelvdlgeaGHinadsgfgswpegl 166
                     a+++ +++aGH     g+++++e+l
     KHJ32618.1 467 SAKVITINNAGHHLYLDGWEEFNEIL 492
                    57899999****99999999998865 PP

>> PGAP1  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   6.9e-06    0.0077      89     133 ..     198     238 ..     187     275 .. 0.77
   2 ?   -1.7   0.0       1.8     2e+03       3      28 ..     419     444 ..     417     477 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 6.9e-06
       PGAP1  89 eptsviliGHSmGGivaraaltlknyikqsvntiltlasPhalpp 133
                 + ++  l+GHSmGG +a   + ++   ++++n+++ lasP+  p 
  KHJ32618.1 198 KLEKFTLLGHSMGGYMA---IAYALKYPGHINKLI-LASPVGIPE 238
                 5567789**********...333333489999987.789987765 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.8
       PGAP1   3 sGipVlFvpGnagsykqvrslAseaa 28 
                 +G p++F+ G    ++    lA+e +
  KHJ32618.1 419 TGFPIIFMYGENDWMDVAGGLAAEQK 444
                 799******99998888888888873 PP

>> Chlorophyllase  Chlorophyllase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.4e-05     0.016      94     149 ..     174     232 ..     123     257 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.4e-05
  Chlorophyllase  94 dsaaevieWlseglkavlptsveanlsklalvGhsrGGktafalalgys...seltfsa 149
                     d+ +++ e  s  ++a  +  ++ +l+k++l Ghs GG  a a al+y    ++l +++
      KHJ32618.1 174 DQVGKIREAESWFIDALEEWRIKRKLEKFTLLGHSMGGYMAIAYALKYPghiNKLILAS 232
                     5555555555555555555688999*********************9973334444444 PP

>> Thioesterase  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   6.4e-05     0.071      67      92 ..     201     224 ..     122     279 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 6.4e-05
                   SEEEEEETHHHHHHHHHHHHHHHCT- CS
  Thioesterase  67 PyalfGhSlGgllAfevArqLesqGl 92 
                    ++l GhS+Gg++A + A ++   G+
    KHJ32618.1 201 KFTLLGHSMGGYMAIAYALKY--PGH 224
                   59***********97776554..444 PP

>> BAAT_C  BAAT / Acyl-CoA thioester hydrolase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00036       0.4      22     106 ..     200     294 ..     190     303 .. 0.72
   2 ?    1.1   0.0      0.29   3.2e+02     144     172 ..     462     489 ..     441     503 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00036
                 SSEEEEEETHHHHHHHHHHHHSS.SEEEEEEES--SB--SSEEEETTE.......EE----B-GGG-EE....-TTS-EE-TT-B--TTTGGGCC CS
      BAAT_C  22 dkigllGiSkGgelalllasflk.kisavvlingsavvvegklvykdes.....kvlpelklsmeklkv....nknglldivdvlallkeklaek 106
                 +k +llG+S Gg +a++ a +++ +i+ ++l ++  +     +  +d s     + ++e+++s++++ +    nk+++ + ++ + ++ e+++++
  KHJ32618.1 200 EKFTLLGHSMGGYMAIAYALKYPgHINKLILASPVGIPEHPYATHNDISepkksALTQEFTESQDETARskisNKSEAEEKYEFRSQPSEQPTKE 294
                 6889*******************99*****99998887766666666667777856666666665555555556666666666666666665544 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.29
                 CTT--.--EEEEETTB-S---STT----- CS
      BAAT_C 144 kagkkvevqlltYpkaGHliepPyfplce 172
                 ++++  + +++t ++aGH+++ +    ++
  KHJ32618.1 462 RKENG-SAKVITINNAGHHLYLDGWEEFN 489
                 33333.6799999******9987765555 PP

>> Abhydrolase_5  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   8.8e-05     0.099      53      86 ..     196     230 ..     188     276 .. 0.83
   2 ?   -3.0   0.0       4.9   5.5e+03      96     113 ..     416     433 ..     410     455 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8.8e-05
  Abhydrolase_5  53 apklekfvvgGhslGGvvasrfaaee.ekiegvvf 86 
                    + klekf + Ghs+GG +a  +a +  ++i+ +++
     KHJ32618.1 196 KRKLEKFTLLGHSMGGYMAIAYALKYpGHINKLIL 230
                    56899*****************9977357777765 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 4.9
  Abhydrolase_5  96 lselskkvlsivgteDgv 113
                     +e++++++ ++g++D +
     KHJ32618.1 416 HKETGFPIIFMYGENDWM 433
                    567889999999999844 PP

>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.065        73       3      25 ..     110     132 ..     108     144 .. 0.84
   2 ?    7.2   0.0    0.0035       3.9     103     140 ..     198     235 ..     171     276 .. 0.80
   3 ?   -3.7   0.0       7.7   8.6e+03     156     183 ..     420     446 ..     410     454 .. 0.64

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.065
                    EEEEE--SS---EEEEEE--TT- CS
  Abhydrolase_2   3 iaevvspkdkaqavviflHGlGd 25 
                     ++v+  +++ ++ +++lHG+G+
     KHJ32618.1 110 EFSVERMGENIEQNLVMLHGYGA 132
                    56788888999999********7 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0035
                    -GGGEEEEEETHHHHHHHHHHHT-SS--SEEEEES--- CS
  Abhydrolase_2 103 pssriiigGFSqGaalalylaltlpkklggivafsgal 140
                    + ++  + G S+G+ +a++ al++p  +   +  s + 
     KHJ32618.1 198 KLEKFTLLGHSMGGYMAIAYALKYPGHINKLILASPVG 235
                    55677899*****************9998877766555 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 7.7
                    G-EEEEEEETT-SSS-HHHHHHHHHHHH CS
  Abhydrolase_2 156 klpilqiHgeeDpvvplalgkaakevlk 183
                      pi+ ++ge D + ++a g aa++ lk
     KHJ32618.1 420 GFPIIFMYGENDWM-DVAGGLAAEQKLK 446
                    56888888888854.6666666666555 PP

>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00015      0.16      63     115 ..     192     239 ..     171     299 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00015
                    HHHHTETTCEEEEEEETHHHHHHHHHHHHHHHTT---EEEEEEESE-SSTSST CS
  Abhydrolase_3  63 awelgadpsrivlaGdSaGGnlaaavalrardegepkvagqvliyPvtdlert 115
                    +w+++ + ++ +l+G S GG +a a al+   +    ++ ++l +Pv  + ++
     KHJ32618.1 192 EWRIKRKLEKFTLLGHSMGGYMAIAYALKYPGH----INKLILASPVGIP-EH 239
                    378888899******************999885....9999999995433.11 PP

>> DUF99  Protein of unknown function DUF99
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00019      0.21      85     145 ..     413     473 ..     411     494 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00019
                 HHHHHHH---EEEEESS---HHHHHHCCT.TSTTHHHHHHHHHHC.---EEETT.....EEE CS
       DUF99  85 erlheetglPviavtreepdlgklekaLrkhfpdeeeRlelieklgerieevek.tgeelyv 145
                 ++ h+etg P+i ++ e+  ++ +   L  + + +ee+ +++e + e++++ e+ + + + +
  KHJ32618.1 413 NNFHKETGFPIIFMYGENDWMD-VAGGLAAEQKLKEEKAKILETASEEERRKENgSAKVITI 473
                 6789********9999988887.**********************66555555523333444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       876  (0.0488594); expected 358.6 (0.02)
Passed bias filter:                      589  (0.0328518); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.64u 0.24s 00:00:00.88 Elapsed: 00:00:00.41
# Mc/sec: 3718.67
//
Query:       KHJ32619.1  [L=239]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       363  (0.0202465); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1792.55
//
Query:       KHJ32620.1  [L=109]
Description: putative thioredoxin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-24   86.3   0.0    1.4e-24   86.1   0.0    1.0  1  Thioredoxin    Thioredoxin
    2.9e-06   27.1   0.0    3.4e-06   26.9   0.0    1.1  1  Thioredoxin_9  Thioredoxin
    0.00021   21.7   0.2     0.0017   18.8   0.2    1.9  1  Thioredoxin_2  Thioredoxin-like domain
    0.00094   18.6   0.0     0.0011   18.4   0.0    1.1  1  OST3_OST6      OST3 / OST6 family, transporter family
     0.0057   17.0   0.0       0.78   10.1   0.0    2.1  2  Thioredoxin_8  Thioredoxin-like
  ------ inclusion threshold ------
      0.011   15.5   0.0      0.014   15.1   0.0    1.2  1  Thioredoxin_5  Thioredoxin
      0.035   14.3   0.1      0.053   13.7   0.1    1.3  1  Thioredoxin_7  Thioredoxin-like
      0.049   13.3   0.1       0.15   11.8   0.1    1.7  2  Redoxin        Redoxin


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.1   0.0   6.1e-28   1.4e-24       4     101 ..       6     100 ..       3     102 .. 0.94

  Alignments for each domain:
  == domain 1  score: 86.1 bits;  conditional E-value: 6.1e-28
                  ESSHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEESS-HHHHHHHHH CS
  Thioredoxin   4 vltkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkkyegarekeklaafl 101
                  +++k++F+++++  ++ v+v+ yA+wCg+C+ ++P++e+l+e+   +  ++k dvde  d+ k++e++++Pt+++f++g + ++++ga++  +l++ +
   KHJ32620.1   6 IHSKAEFDDAINT-HQIVVVDAYATWCGPCRIISPVFERLSETKP-QAYFVKFDVDEVLDVTKELEIRAMPTFVFFRQGIKGNQITGANP-VALENAI 100
                  67899********.***************************9999.******************************************99.7777666 PP

>> Thioredoxin_9  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   1.5e-09   3.4e-06      48     110 ..      26      85 ..       4     103 .. 0.72

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 1.5e-09
                    E--TT-HHHHHHHHHHHHHHHH-TTEEEEEE-HHHHHHHTTTTTT-SS--SSEEEEE-TT--E CS
  Thioredoxin_9  48 ltedwCgDaavnvPvlakiaelnpnievkillrdenlelmdqyltngaraiPtliildeegee 110
                      + wCg ++++ Pv+++++e++p+    ++++ +  e++d  ++ + ra Pt++++ ++ + 
     KHJ32620.1  26 AYATWCGPCRIISPVFERLSETKPQ---AYFVKFDVDEVLDVTKELEIRAMPTFVFFRQGIKG 85 
                    3578*******************66...56666666666666666688*********998543 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.2   7.6e-07    0.0017       3     101 ..      17      93 ..      15      99 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 7.6e-07
  Thioredoxin_2   3 gngkpvlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtivfldgkeivarlpG 98 
                     +++ v+v+ ++++C+ C+ +  +++ l             ++ +p+a  ++ + +++          ++ +++++r++Pt+vf+ +  + ++++G
     KHJ32620.1  17 NTHQIVVVDAYATWCGPCRIISPVFERL-------------SETKPQAYFVKFDVDEV---------LDVTKELEIRAMPTFVFFRQGIKGNQITG 90 
                    57888999999************99999.............22334444444444444.........56779***********9998867789999 PP

  Thioredoxin_2  99 yvp 101
                    + p
     KHJ32620.1  91 ANP 93 
                    865 PP

>> OST3_OST6  OST3 / OST6 family, transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   4.8e-07    0.0011      45     109 ..      30      86 ..      15     106 .. 0.82

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 4.8e-07
   OST3_OST6  45 kCelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlllfppkkgpk 109
                  C +Cr + p fe +++   +         +F+k d+de  dv ++l+++  P +++f +  + +
  KHJ32620.1  30 WCGPCRIISPVFERLSETKPQA--------YFVKFDVDEVLDVTKELEIRAMPTFVFFRQGIKGN 86 
                 4999999999999998865555........9***************************9955444 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   0.00035      0.78       2      28 ..      20      46 ..      19      49 .. 0.88
   2 !    5.9   0.0    0.0074        17      56      89 ..      46      79 ..      42      83 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00035
                   SEEEEEE--SSSHHHHHHHHHHHHHHH CS
  Thioredoxin_8  2 kvvlLyfgaswcppckaftpklkelye 28
                   ++v++  +a+wc pc+ + p   +l+e
     KHJ32620.1 20 QIVVVDAYATWCGPCRIISPVFERLSE 46
                   699*************99999888876 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0074
                   GS-TTSEE.EE-TT-HHHHTT-S--TT-SEEEEE CS
  Thioredoxin_8 56 knkkpwlsvpfddkkrnklkkkynvkaiPtlvvl 89
                   ++k++ ++v fd ++   + k++++ a+Pt+v  
     KHJ32620.1 46 ETKPQAYFVKFDVDEVLDVTKELEIRAMPTFVFF 79
                   5567899***********************9975 PP

>> Thioredoxin_5  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0   6.2e-06     0.014     147     173 ..      62      88 ..      47      98 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 6.2e-06
  Thioredoxin_5 147 lklakemgvtevPtlvffneneeeegl 173
                    l ++ke++++ +Pt+vff +  +++++
     KHJ32620.1  62 LDVTKELEIRAMPTFVFFRQGIKGNQI 88 
                    789***************976665554 PP

>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   2.4e-05     0.053      15      81 ..      17      79 ..       7      81 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.4e-05
                   HHT--EEEEE--TT-HHHHHHHHHHHH-HHHHH.HHHT-EEEEESS--S-GGG.-TT---SSEEEEE CS
  Thioredoxin_7 15 ergkpvlvffgaswcftCqalerdflsdeevkaalaekfvllrvdvterdanileldeqgvPvvafl 81
                    +++ v v+  a+wc++C+ +  +f+   e k+    +  ++++dv+e  + + el+ +  P+++f+
     KHJ32620.1 17 NTHQIVVVDAYATWCGPCRIISPVFERLSETKP----QAYFVKFDVDEVLDVTKELEIRAMPTFVFF 79
                   56777999*****************99988887....999999999999886633333678988887 PP

>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   6.8e-05      0.15      30      57 ..      21      47 ..       8      62 .. 0.79
   2 ?   -0.6   0.0      0.43   9.6e+02      90     120 ..      57      78 ..      47      82 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6.8e-05
                EEEEEEESTTT-HHHHHTHHHHHTHHHH CS
     Redoxin 30 kvvvnfvpgafcPtCsaehpyleklael 57
                 vvv ++++ +c++C+   p +e l+e 
  KHJ32620.1 21 IVVVDAYAT-WCGPCRIISPVFERLSET 47
                478889999.******988877777665 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.43
                 EE-TTSHHHHHTT-TTEEE.GGGEEE-EEEE CS
     Redoxin  90 lsDgsaaftkalGlrleedaseglrtpryav 120
                  +D+  ++tk+l +r         ++p+++ 
  KHJ32620.1  57 DVDEVLDVTKELEIR---------AMPTFVF 78 
                 568899999999977.........8888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       281  (0.0156729); expected 358.6 (0.02)
Passed bias filter:                      257  (0.0143343); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 830.30
//
Query:       KHJ32621.1  [L=317]
Description: putative zinc finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-07   31.9  10.5    1.1e-05   25.5   0.6    3.9  3  zf-C2H2        Zinc finger, C2H2 type
    3.5e-07   30.4   1.2    3.5e-07   30.4   1.2    3.0  3  zf-H2C2_2      Zinc-finger double domain
    6.2e-05   23.5   6.8       0.21   12.3   0.1    3.4  3  FOXP-CC        FOXP coiled-coil domain
    0.00048   20.7   7.7     0.0039   17.9   0.5    3.3  3  zf-C2H2_4      C2H2-type zinc finger
     0.0013   18.7   1.3       0.39   10.8   0.0    2.5  2  zf-C2H2_6      C2H2-type zinc finger
     0.0021   18.3   3.2       0.13   12.6   0.6    3.4  2  zf-C2H2_jaz    Zinc-finger double-stranded RNA-binding
  ------ inclusion threshold ------
      0.012   15.9   2.7       0.97    9.9   0.2    3.2  2  zf-met         Zinc-finger of C2H2 type
       0.12   12.1   0.2        2.7    7.8   0.0    2.4  2  zf-C2H2_11     zinc-finger C2H2-type
       0.15   12.2   2.3        1.4    9.1   0.5    2.3  2  zf-C2H2_aberr  Aberrant zinc-finger
       0.86    9.9   3.9        8.1    6.8   1.0    2.5  2  zf-Di19        Drought induced 19 protein (Di19), zinc-bindin


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1      0.26   4.7e+02      12      23 .]      99     111 ..      86     111 .. 0.76
   2 !    8.6   1.1    0.0015       2.7       1      23 []     119     146 ..     119     146 .. 0.89
   3 !   25.5   0.6   6.4e-09   1.1e-05       1      23 []     152     177 ..     152     177 .. 0.96

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.26
                 SHHHHHHHHHC.C CS
     zf-C2H2  12 rksnLkrHirt.H 23 
                 + +nL++Hi   H
  KHJ32621.1  99 NMDNLVAHIHEdH 111
                 5689****99877 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0015
                 EEET..TTT...EEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCp..dCg...ksFkrksnLkrHirtH 23 
                 y C+  dCg   ++  + + Lk+H+r+H
  KHJ32621.1 119 YICEwnDCGrknMPHASAYALKAHMRSH 146
                 77888899999988899**********9 PP

  == domain 3  score: 25.5 bits;  conditional E-value: 6.4e-09
                 EEET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                 ++C+  +C++sF+r++ L++H+rt H
  KHJ32621.1 152 FYCElpECDRSFTRSDALQKHYRTvH 177
                 789999******************99 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.3       1.9   3.4e+03       1      13 [.     102     114 ..     102     129 .. 0.59
   2 !   30.4   1.2   1.9e-10   3.5e-07       1      26 []     138     165 ..     138     165 .. 0.95
   3 ?    1.3   0.1      0.31   5.6e+02       1      10 [.     168     178 ..     168     183 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.9
   zf-H2C2_2   1 nLrrHirkHtgek 13 
                 nL+ Hi + ++e+
  KHJ32621.1 102 NLVAHIHEDHVET 114
                 7899997644444 PP

  == domain 2  score: 30.4 bits;  conditional E-value: 1.9e-10
   zf-H2C2_2   1 nLrrHirkHtgekpyeCp..lCdkaFkt 26 
                 +L+ H+r+Ht+ekp+ C+  +Cd +F++
  KHJ32621.1 138 ALKAHMRSHTKEKPFYCElpECDRSFTR 165
                 69****************999*****85 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.31
   zf-H2C2_2   1 nLrrHirk.Ht 10 
                 +L++H r+ H 
  KHJ32621.1 168 ALQKHYRTvHE 178
                 79*****6585 PP

>> FOXP-CC  FOXP coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.2   0.00023      0.41       5      32 ..      85     113 ..      83     118 .. 0.84
   2 ?    1.8   0.4      0.22   3.9e+02       6      27 ..     120     144 ..     117     152 .. 0.62
   3 !   12.3   0.1   0.00011      0.21       7      32 ..     154     179 ..     150     183 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00023
     FOXP-CC   5 gvCkWPgCek.vledveeflkhlnseHal 32 
                  vC+W +C++  l +++++++h++++H  
  KHJ32621.1  85 TVCRWADCDAgDLVNMDNLVAHIHEDHVE 113
                 58******7636999************75 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.22
     FOXP-CC   6 vCkWPgC...ekvledveeflkhln 27 
                 +C+W +C   +    ++ ++ +h++
  KHJ32621.1 120 ICEWNDCgrkNMPHASAYALKAHMR 144
                 7******543334445555566655 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 0.00011
     FOXP-CC   7 CkWPgCekvledveeflkhlnseHal 32 
                 C+ P+C++ ++ +++++kh ++ H++
  KHJ32621.1 154 CELPECDRSFTRSDALQKHYRTVHET 179
                 99**********************86 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       5.3   9.5e+03      10      24 .]      97     111 ..      86     111 .. 0.62
   2 ?    6.1   0.2     0.013        24       5      23 ..     123     146 ..     119     147 .. 0.69
   3 !   17.9   0.5   2.2e-06    0.0039       1      24 []     152     177 ..     152     177 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 5.3
   zf-C2H2_4  10 FsskkaLlrHlkthH 24 
                   + ++L  H+   H
  KHJ32621.1  97 LVNMDNLVAHIHEDH 111
                 456667888876655 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.013
   zf-C2H2_4   5 i..C...gksFsskkaLlrHlkth 23 
                 +  C   + +  s +aL+ H+++h
  KHJ32621.1 123 WndCgrkNMPHASAYALKAHMRSH 146
                 5555544555667888*******9 PP

  == domain 3  score: 17.9 bits;  conditional E-value: 2.2e-06
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkthH 24 
                 f+C++  C++sF++++aL++H +t+H
  KHJ32621.1 152 FYCELpeCDRSFTRSDALQKHYRTVH 177
                 7888888******************9 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.3    0.0051       9.1      13      26 ..     135     148 ..     134     149 .. 0.85
   2 !   10.8   0.0   0.00022      0.39       6      25 ..     158     178 ..     157     180 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0051
   zf-C2H2_6  13 slqaLggHkksHrk 26 
                 s +aL  H++sH k
  KHJ32621.1 135 SAYALKAHMRSHTK 148
                 569*********76 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00022
   zf-C2H2_6   6 vCsksFpslqaLggHkks.Hr 25 
                 +C++sF   +aL +H ++ H+
  KHJ32621.1 158 ECDRSFTRSDALQKHYRTvHE 178
                 9**************999554 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1      0.03        53      13      24 ..     135     146 ..     134     148 .. 0.89
   2 !   12.6   0.6   7.3e-05      0.13       2      23 ..     152     175 ..     151     177 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.03
                  SHHHHHCCTTSH CS
  zf-C2H2_jaz  13 senaldnHlkSK 24 
                  s++al++H++S+
   KHJ32621.1 135 SAYALKAHMRSH 146
                  789********6 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 7.3e-05
                  CBBTT..TTBBBSSHHHHHCCTTS CS
  zf-C2H2_jaz   2 fYCvl..CdKyFksenaldnHlkS 23 
                  fYC+l  Cd+ F  + al++H+++
   KHJ32621.1 152 FYCELpeCDRSFTRSDALQKHYRT 175
                  7886555***************96 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.2     0.022        39      10      23 ..     133     146 ..     130     147 .. 0.83
   2 ?    9.9   0.2   0.00054      0.97       6      21 ..     159     174 ..     152     175 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.022
      zf-met  10 fnsesqlksHlqGK 23 
                 + s  +lk+H++++
  KHJ32621.1 133 HASAYALKAHMRSH 146
                 678999*******8 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00054
      zf-met   6 CnvtfnsesqlksHlq 21 
                 C+++f+   +l+ H++
  KHJ32621.1 159 CDRSFTRSDALQKHYR 174
                 ***************7 PP

>> zf-C2H2_11  zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.13   2.3e+02      10      25 ..     126     144 ..     124     145 .. 0.79
   2 ?    7.8   0.0    0.0015       2.7       9      28 ..     158     177 ..     154     178 .. 0.96

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.13
  zf-C2H2_11  10 CGlc...ftSqlsLsRHlf 25 
                 CG++    +S+ +L+ H++
  KHJ32621.1 126 CGRKnmpHASAYALKAHMR 144
                 7777555799*******96 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0015
  zf-C2H2_11   9 eCGlcftSqlsLsRHlfIvH 28 
                 eC + ft + +L++H + vH
  KHJ32621.1 158 ECDRSFTRSDALQKHYRTVH 177
                 7******************9 PP

>> zf-C2H2_aberr  Aberrant zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1     0.085   1.5e+02      37      67 ..      85     113 ..      76     119 .. 0.83
   2 ?    9.1   0.5   0.00077       1.4       1      90 [.     119     202 ..     119     219 .. 0.59

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.085
  zf-C2H2_aberr  37 lkCpvrkCsesivelentelleehlekehaa 67 
                     +C   +C     +l n+++l  h++  h +
     KHJ32621.1  85 TVCRWADC--DAGDLVNMDNLVAHIHEDHVE 113
                    57999999..67899999*******999974 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00077
  zf-C2H2_aberr   1 ykClykaCdlky...ssvlglrrhlveykhslytnsefslkCpvrkCsesivelentelleehlekehaakllellkeleieikkteetekvn 90 
                    y C +++C+ k+    s ++l+ h++   h     +e+ + C + +C+ s+   +  + l++h +  h +++l+    +   ++  ++  k +
     KHJ32621.1 119 YICEWNDCGRKNmphASAYALKAHMRS--H----TKEKPFYCELPECDRSF---TRSDALQKHYRTVHETEALRPSDPIPKSMQTANKSSKQK 202
                    567777775443111677777777765..3....23567778888886554...556667777777777666665555555555555555555 PP

>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   1.0    0.0045       8.1      12      34 ..      98     121 ..      92     149 .. 0.76
   2 ?    3.4   0.1     0.054        97       6      29 ..     157     181 ..     150     196 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0045
     zf-Di19  12 ltvkeLveHvedeHrvesk.evvC 34 
                 ++ ++Lv+H+ ++H +++  +++C
  KHJ32621.1  98 VNMDNLVAHIHEDHVETRSkKYIC 121
                 67789*********9876427888 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.054
     zf-Di19   6 PyCgkelt.vkeLveHvedeHrves 29 
                 P C +++t  ++L++H  + H  e+
  KHJ32621.1 157 PECDRSFTrSDALQKHYRTVHETEA 181
                 779997651678*********9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       958  (0.053433); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2351.17
//
Query:       KHJ32622.1  [L=585]
Description: putative protein c6 finger domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-08   34.0   9.9    3.8e-08   33.3   9.9    1.4  1  Zn_clus     Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
       0.15   12.1  16.5       0.26   11.2  16.5    1.5  1  TFIIA       Transcription factor IIA, alpha/beta subunit


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   9.9   4.3e-12   3.8e-08       1      35 [.     169     203 ..     169     208 .. 0.90

  Alignments for each domain:
  == domain 1  score: 33.3 bits;  conditional E-value: 4.3e-12
                 SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCT CS
     Zn_clus   1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfyse 35 
                 ++C +Crk+++KCd+ +PaC+nC+k+  eC  y+ 
  KHJ32622.1 169 TGCLTCRKRRIKCDELHPACRNCQKSKRECLGYDP 203
                 58****************************88876 PP

>> TFIIA  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2  16.5   2.9e-05      0.26     149     282 ..      19     184 ..       1     266 [. 0.49

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.9e-05
       TFIIA 149 sgaqqiaaqplqqvvqq..............sqgsaaqssvaalqaqsqqaqalaepqqqlekq..............qqqqqqqqqqqqqqqvqqqqq 219
                 s+aqq   q lqq v+               ++++  q   ++  ++                +                + qqqq+qqqqqq+qqqqq
  KHJ32622.1  19 SNAQQKKGQFLQQAVNYpsptygdspcitqfNYPPPVQPGPEPYRES----------------PpasnssaplpsmrsIDPLQQQQHQQQQQQQQQQQQ 101
                 22222222222222221111221111111223333333333333333................033333344555554445444555555554444444 PP

       TFIIA 220 e................esqqaqqa.sqeqvagsqvessqtdgae.....daleeespv..legelsaeeeagaqkeelsreeidri 282
                 +                 +qq++++  q+    ++v+s q+ ++        ++ +++   ++ e++++ + g+ +   +r + d++
  KHJ32622.1 102 QiitnipppvaqmgagpYYQQPPHNlAQY----PNVSSGQNGQNMhfaltPTDTRQANGgrHKKEIKRRTKTGCLTCRKRRIKCDEL 184
                 44666766666555555333333332222....122111111111222221111111112355555555555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1548  (0.0863406); expected 358.6 (0.02)
Passed bias filter:                      718  (0.0400469); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.44
# Mc/sec: 4035.84
//
Query:       KHJ32623.1  [L=672]
Description: putative transcriptional regulator medusa [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.17   12.4   0.0       0.32   11.4   0.0    1.5  1  STE       STE like transcription factor


Domain annotation for each model (and alignments):
>> STE  STE like transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   1.8e-05      0.32       9      99 ..     446     536 ..     438     543 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.8e-05
         STE   9 eeeegfiscvlwkn..lfyitgtdivkilvykleafGrkitdkkkfeeGifsdlrnlkigvdavleepksefldllyknkclr...tqkkqkvfyw 99 
                 ++++ +isc++w++  +f+it+ d + +l  kl a   ++++k+++      +l  +++ + +  +++  ef+++++ + + +    +k  kvf+w
  KHJ32623.1 446 PKDSICISCIYWEEkrDFFITSVDTIYLL-QKLVAAQFTVEEKNRIR----RNLEGFRPLTVSKGKTESEEFFKIIMAFPAPKprnIEKDVKVFHW 536
                 567779******75337*******98655.46666666666666544....344444444444444455556666555554431113455566666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (672 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       718  (0.0400469); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.38
# Mc/sec: 5321.72
//
Query:       KHJ32624.1  [L=780]
Description: putative myb-like dna-binding domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.8e-39  134.3  10.0    4.8e-39  134.3  10.0    2.6  3  Myb_Cef          pre-mRNA splicing factor component
    7.9e-22   77.2   4.8    8.6e-11   41.9   0.9    2.7  2  Myb_DNA-binding  Myb-like DNA-binding domain
    3.2e-21   75.3   5.6    4.9e-14   52.3   1.8    3.0  2  Myb_DNA-bind_6   Myb-like DNA-binding domain
     0.0052   16.8   0.3       0.11   12.6   0.0    2.9  2  Rap1_C           TRF2-interacting telomeric protein/Rap1 - C 


Domain annotation for each model (and alignments):
>> Myb_Cef  pre-mRNA splicing factor component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   5.6         2     9e+03      80     126 ..     153     199 ..     144     205 .. 0.62
   2 ?   -6.5   3.9         4   1.8e+04      98     115 ..     264     281 ..     240     309 .. 0.52
   3 !  134.3  10.0   1.1e-42   4.8e-39       1     223 [.     422     629 ..     422     642 .. 0.90

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 2
     Myb_Cef  80 ivvpeeeeeee.eeeeeeeekveeDaadidarkkaereaeeekelkrr 126
                 i ++e+e+e + +e ++  ++++  +a ++ar+++ +e ++ + l++r
  KHJ32624.1 153 IDLDEDEKE-MlSEARARLANTQGKKAKRKARERQLEESRRLAVLQKR 199
                 556666654.33333334555556666666666666666666666665 PP

  == domain 2  score: -6.5 bits;  conditional E-value: 4
     Myb_Cef  98 ekveeDaadidarkkaer 115
                   ++eD + +++rk ++ 
  KHJ32624.1 264 RLIQEDDSGRKKRKGEKD 281
                 344444444444443332 PP

  == domain 3  score: 134.3 bits;  conditional E-value: 1.1e-42
     Myb_Cef   1 TpntvlatPfrtakaegaTprrg.v...atPlrTplRDkLniNeees.llvgetpreekqrqkeakeqLrsgLasLPkPkn.dyeivvpeeeeeeeeee 93 
                 Tpn+ latPf+t+++ g+Tp+r        PlrTp RD++++N  e+    ++tp++ k r++e k+ L++gL sLPkPk+ ++e+++pe ++e     
  KHJ32624.1 422 TPNP-LATPFHTSNGIGVTPMRApGiagDGPLRTP-RDSFSLNVSEQiHYSESTPQQIKLREQEIKNRLKQGLLSLPKPKEtEWELELPEIKKE----- 513
                 9***.*******99*******98657888889***.***********87888999***********************************9976..... PP

     Myb_Cef  94 ee.eeekveeDaadidarkkaereaeeekelkrrsqvvqrnLPRPaevneevlreslsspaneeapltdlqkaeelIkkEmltllhhDalknPlkskkg 191
                  + ++ ++ eDa  id+r++ ++e +e++e+ r+++v+q++LPRP++ + +++ +++ + a++          + ++ +E + l ++Da++  + + + 
  KHJ32624.1 514 -PlKNLEISEDAELIDRRNQLAKESREKEEFLRKTKVIQKGLPRPVNFDAQAILSQILEVADS---------SQAAVLQEAALLQSNDAIRSNTAQDP- 601
                 .556899***********************************************777775555.........6899****************992222. PP

     Myb_Cef 192 aaqheayleaspyeefedeeleaAkellkeEm 223
                     +  ++ +++e+++++ele A++ +++ m
  KHJ32624.1 602 ----KMNSDLTELESLTQDELERARSEINSAM 629
                 ....24567789**************999866 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.9   0.9   1.9e-14   8.6e-11       2      46 .]       7      52 ..       6      52 .. 0.97
   2 !   36.4   0.2   9.9e-13   4.4e-09       3      46 .]      60     102 ..      58     102 .. 0.96

  Alignments for each domain:
  == domain 1  score: 41.9 bits;  conditional E-value: 1.9e-14
                     SSSBHHHHHHHHHHHHHHT.TCHHHHHHHHTSS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 gkWteeEdelLleavkkhG.nrWkkIaerlggRtekqcrsrwrnyl 46
                     g Wt  Ede+L   v k+G n+W+++++ l  +t+kqc+ rw+ +l
       KHJ32624.1  7 GVWTNIEDEILKASVSKYGlNQWARVSSLLARKTPKQCKARWNEWL 52
                     78*****************************************997 PP

  == domain 2  score: 36.4 bits;  conditional E-value: 9.9e-13
                      SSBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 kWteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwrnyl 46 
                      +W++eEde+Ll + k++  +W++Ia  + gRt+ qc +r++++l
       KHJ32624.1  60 EWSKEEDEKLLHLAKLMPTQWRTIAPIV-GRTATQCLERYQRLL 102
                      6***************************.6***********986 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   1.8   1.1e-17   4.9e-14       1      60 []       9      69 ..       9      69 .. 0.98
   2 !   33.4   0.1   8.6e-12   3.9e-08       1      46 [.      61     104 ..      61     110 .. 0.91

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 1.1e-17
  Myb_DNA-bind_6  1 WteeEdeiLlklvekyg.ndWknIaealnrRtpkqcfdrwknkLrpkisrkkwskeedirL 60
                    Wt  EdeiL   v+kyg n+W  +++ l+r+tpkqc+ rw++ L+p i++++wskeed++L
      KHJ32624.1  9 WTNIEDEILKASVSKYGlNQWARVSSLLARKTPKQCKARWNEWLDPGIRKIEWSKEEDEKL 69
                    *****************89***************************************998 PP

  == domain 2  score: 33.4 bits;  conditional E-value: 8.6e-12
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwknkLrpk 46 
                     W++eEde+Ll l + +  +W++Ia + + Rt++qc +r+++ L ++
      KHJ32624.1  61 WSKEEDEKLLHLAKLMPTQWRTIAPIVG-RTATQCLERYQR-LLDE 104
                     ****************************.************.6554 PP

>> Rap1_C  TRF2-interacting telomeric protein/Rap1 - C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   2.4e-05      0.11      43      81 ..       4      49 ..       1      52 [. 0.82
   2 ?    0.5   0.0      0.14   6.4e+02      48      57 ..      61      88 ..      57     134 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.4e-05
      Rap1_C 43 nkrGiWteedDeaLka.......gderdlerlekkhgeerierRrk 81
                 k G+Wt  +De+Lka       +++  ++ l   ++ +++++R++
  KHJ32624.1  4 VKGGVWTNIEDEILKAsvskyglNQWARVSSLLARKTPKQCKARWN 49
                5679**********444444566999999***************95 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.14
      Rap1_C 48 WteedDeaL..................k 57
                W++e+De+L                  +
  KHJ32624.1 61 WSKEEDEKLlhlaklmptqwrtiapivG 88
                *********7777666666666666662 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (780 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1393  (0.0776954); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.26s 00:00:00.93 Elapsed: 00:00:00.39
# Mc/sec: 5945.16
//
Query:       KHJ32625.1  [L=424]
Description: putative peroxin 26 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0027   17.1   3.4     0.0027   17.1   2.2    1.6  1  Pex26       Pex26 protein
  ------ inclusion threshold ------
      0.015   15.2   0.5       0.03   14.2   0.5    1.5  1  Hypoth_Ymh  Protein of unknown function (Hypoth_ymh)
      0.069   12.6   0.1        0.2   11.1   0.0    1.9  2  PTPA        Phosphotyrosyl phosphate activator (PTPA) protein


Domain annotation for each model (and alignments):
>> Pex26  Pex26 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   2.2   4.5e-07    0.0027     153     225 ..     197     268 ..     191     300 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 4.5e-07
       Pex26 153 peyrtvaelyllhvLlPlgelaEAeelvegsaafseeqrqealeiieekkqqqkeesseseeeqkvskegsls 225
                  +   v ely lhvLl   e + A+e+++ s+ + e++r++ le++++ + +q+e +++ +eeq+ + e  l 
  KHJ32625.1 197 NSLVKVLELYTLHVLLRNNEWDFAREVITVSSILDEDRREAFLEALSTLQAEQREIQQKDQEEQRLRDEK-LR 268
                 5566899***************************************998888877777777777655432.33 PP

>> Hypoth_Ymh  Protein of unknown function (Hypoth_ymh)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.5     5e-06      0.03      15      80 ..     229     294 ..     223     329 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5e-06
  Hypoth_Ymh  15 llaenyreAvseAikaledrvreksgltkdgkeLmqeafsakk.pllaindlstetekseqeGlknL 80 
                  l+e+ reA+ eA   l+++ re+ + +++++ L +e ++ ++ +ll++n+   e++++e+  lk L
  KHJ32625.1 229 ILDEDRREAFLEALSTLQAEQREIQQKDQEEQRLRDEKLRRDAeELLKLNRDI-EQKREEETKLKRL 294
                 578999**********************99***********997888898777.6666666666666 PP

>> PTPA  Phosphotyrosyl phosphate activator (PTPA) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   3.3e-05       0.2      52      89 ..      74     111 ..      14     228 .. 0.84
   2 ?   -0.9   0.1      0.15   8.8e+02      49      85 ..     235     272 ..     179     302 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.3e-05
                 HHHHHHHHHHCCCTS---SS--SSS-THHHHHHHHHHH CS
        PTPA  52 llklLdeleelideippeeqpsRfGnkafrtwhdrlee 89 
                 + +l  ++ + i e pp+e+++ fGn +fr  ++++++
  KHJ32625.1  74 VWSLYLTILNAICELPPDEGKQNFGNFEFRALVSKVRD 111
                 44555667778899******************999986 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.15
                 HHHHHHHHHHHHHCCCTS---SS-.-SSS-THHHHHHH CS
        PTPA  49 vekllklLdeleelideippeeqp.sRfGnkafrtwhd 85 
                  e++l+ L++l++  +ei +++q+ +R  +++ r+  +
  KHJ32625.1 235 REAFLEALSTLQAEQREIQQKDQEeQRLRDEKLRRDAE 272
                 45566666666666666666665336665555554433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2061  (0.114953); expected 358.6 (0.02)
Passed bias filter:                      672  (0.0374812); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.38
# Mc/sec: 3303.17
//
Query:       KHJ32626.1  [L=163]
Description: putative trafficking protein particle complex subunit 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.3e-47  158.6   0.1    9.5e-47  158.4   0.1    1.0  1  Sedlin_N       Sedlin, N-terminal conserved region
    0.00011   22.1   0.1     0.0036   17.2   0.0    2.2  2  Sybindin       Sybindin-like family
  ------ inclusion threshold ------
        0.1   12.8   0.0       0.13   12.4   0.0    1.2  1  Thioredoxin_4  Thioredoxin
       0.12   12.4   0.1       0.18   11.9   0.1    1.3  1  DUF4110        Domain of unknown function (DUF4110)


Domain annotation for each model (and alignments):
>> Sedlin_N  Sedlin, N-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.4   0.1   2.1e-50   9.5e-47       1     131 []       7     161 ..       7     161 .. 0.98

  Alignments for each domain:
  == domain 1  score: 158.4 bits;  conditional E-value: 2.1e-50
    Sedlin_N   1 iigkkdnplyelefssskekeeke......lkeLnqfilhasLDivedlqwktnnlylgkvdkfeklsvsayvtnskikflllhes............. 80 
                 iig++dn l+e ef ++k++ +        ++++nqfi+h+sLDive+ qw+t+++yl+ +dkf++ ++s y+t +++kflllh               
  KHJ32626.1   7 IIGTQDNCLFEYEFGTAKQGGDGIarfpeqARHMNQFIIHSSLDIVEEVQWSTGQMYLKVIDKFYNNYISCYITGGNVKFLLLHAPsqpaashtsrnnt 105
                 9*******************9998999999********************************************************************* PP

    Sedlin_N  81 .....ssskkkdekikqffqevhelyvktlmnPFykvneeirSpaFdkkvkklakk 131
                      ++s++++e+ikqff+ev+e++vk +mnPFy+vn+e++Sp+F+++v++++kk
  KHJ32626.1 106 siaanPNSPQTEEAIKQFFTEVYENWVKAIMNPFYHVNMEVKSPTFRARVAAAGKK 161
                 ***************************************************99987 PP

>> Sybindin  Sybindin-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.016        70      74      98 ..      72      96 ..       3     108 .. 0.64
   2 !   17.2   0.0     8e-07    0.0036      94     137 ..     111     156 ..     105     161 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.016
    Sybindin 74 tfkLhclqtltGiKfvlitdtktna 98
                +  ++c+ t   +Kf+l++ +++ a
  KHJ32626.1 72 NNYISCYITGGNVKFLLLHAPSQPA 96
                224899999999****999998843 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 8e-07
    Sybindin  94 tktnaeadsllrkiyelYsdyv..lknPfyslempircelFdeklk 137
                 +++ ++ + +++ + e+Y ++v  + nPfy+++m +++  F+ ++ 
  KHJ32626.1 111 PNSPQTEEAIKQFFTEVYENWVkaIMNPFYHVNMEVKSPTFRARVA 156
                 55556677888888899988865578***************98875 PP

>> Thioredoxin_4  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   2.9e-05      0.13      38      98 ..      74     134 ..      65     161 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.9e-05
                    HHHHHHHTTSEEEEEEE-..---STTTHHHHHHHTT--TTHHHHHHHHHHHHTHHHHTTS- CS
  Thioredoxin_4  38 lleeyidtGkvkfiirdfpldkekeslkaamaarcageespeaflaikallysqqeewaes 98 
                     ++ yi  G+vkf   + p ++ ++ +++ + + +a+++sp+  +aik+++ +  e+w ++
     KHJ32626.1  74 YISCYITGGNVKFLLLHAPSQPAASHTSRNNTSIAANPNSPQTEEAIKQFFTEVYENWVKA 134
                    56779999*************9998899999******************999888888655 PP

>> DUF4110  Domain of unknown function (DUF4110)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1     4e-05      0.18       8      36 ..     112     140 ..     105     157 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4e-05
     DUF4110   8 ptPrpgEslrdFfaRTseeWqelaieslk 36 
                 + P+++E++++Ff+   e+W++++++ + 
  KHJ32626.1 112 NSPQTEEAIKQFFTEVYENWVKAIMNPFY 140
                 68**********************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       746  (0.0416086); expected 358.6 (0.02)
Passed bias filter:                      556  (0.0310112); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1194.40
//
Query:       KHJ32627.1  [L=565]
Description: putative caf1 family ribonuclease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-72  244.6   0.0      2e-72  244.1   0.0    1.2  1  CAF1            CAF1 family ribonuclease
    0.00095   18.9   0.0     0.0057   16.4   0.0    2.2  3  DNA_pol_A_exo1  3'-5' exonuclease


Domain annotation for each model (and alignments):
>> CAF1  CAF1 family ribonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  244.1   0.0   2.2e-76     2e-72       1     319 []       3     423 ..       3     423 .. 0.86

  Alignments for each domain:
  == domain 1  score: 244.1 bits;  conditional E-value: 2.2e-76
                 E-GGGHHHHHHHHHHHHHH-SEEEEEEEES-S.......S-----------HHHHHHHHHHHTTTB-EEEEEEEEEEEETTTTE..EEEEEEEEEB--- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CAF1   1 VtrsNfkellpeilkaikeasFvAiDlEftGl.......segerkesladsleerYeklkqaaesfsilqlGlscfsedkekkekeykvqpynfylfpk 92 
                 + +sNf + l +il +i++as+v +D+E++G+         ++  + ++++l+++Y +++ +ae+f+ilq+G+++++e ++k+   y ++pynf l+p 
  KHJ32627.1   3 ICQSNFYKNLLDILVNISRASYVTFDFEMSGIttrpknsPGDRSLDVEKPTLQQQYDEVRSTAETFQILQMGITIVEEVRDKEF--YIARPYNFDLSPL 99 
                 6789****************************999886433344566789999***********************88887775..************9 PP

                 -S.....S---EEEEEHHHHHHHHHTT--HHHHHTT-B-B--HHHHHHHHCH-----.....---.-----TTC.HHHHHH.................. CS
                 xx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx.................. RF
        CAF1  93 ee.....dldrefsvspsslqFLakngfdfnkliseGipYlsrkeeekakerleerkeekekske.nvkivsdedkefvee.................. 167
                 +       l+r + +++ss++FL +ngfdf k+++ G+pYlsr+ee++++ ++e r e+++k  +  ++ ++++++ef++                   
  KHJ32627.1 100 SYggidiGLQRTIRFNSSSCDFLHSNGFDFGKVFRTGVPYLSRAEESELRSEFELRAERNSKIPDlIIEDADKKASEFCDYirntitdwlekpvqkyvn 198
                 88****99*********************************************9994444444445666677777777775666777777778888888 PP

                 .........................................-S.HHHHHHHHHHHHHHHHHHHHHHSBTHHHHHHHH...................... CS
                 .........................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...................... RF
        CAF1 168 .........................................kskeeeelkeeeklkeeeeekiakqsgfrlvfealv...................... 203
                                                          k + e+e+ +++ + ++ ++k+ kq+g+ ++feal+                      
  KHJ32627.1 199 igttdnkltgfqrrlvhqivrrdfpnlrtynrcdgdfmqieKLNVEQEAIHRKFRLKKFDTKLLKQKGLGWIFEALCggnltgidplwvynqqdeepek 297
                 8999999999999999999999999999999999999877533333333334445559999************************************** PP

                 .................HC--EEEESSTHHHHHHHHHHHT----SSHHHHHHHHHHH-SSEEEHHHHHTSTTTTTT-S--SHHHHHHHTTSTTS--... CS
                 .................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CAF1 204 .................ksrkpiVgHNgllDllflyqtfyaeLPesleeFkaklselFPgiiDtKylakneelearleassLeelfeklkkenskskda 285
                                   ++++iVgHN ++Dl+fly+tf+++LP+++e+F +++++lFP++iDtK+la ++ le+++ +ssL+e+ e + k  +     
  KHJ32627.1 298 lpagiatritdveaklkLRNHIIVGHNIFMDLAFLYKTFVGPLPSQVEDFRKEIHRLFPRVIDTKFLA-THGLESKYIRSSLKEVLEPFLKVDNPLIL- 394
                 *************9998889************************************************.7888999*************777776632. PP

                 ....--EEE-TTS---------HHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CAF1 286 ssseekkesekkkaaseesaHeAGyDafmTGlvf 319
                        +++    +s ++ HeAGyD++mT+ +f
  KHJ32627.1 395 -----LHQDHRFYGSSFGKDHEAGYDSWMTAELF 423
                 .....222222222445669***********998 PP

>> DNA_pol_A_exo1  3'-5' exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       0.2   1.8e+03      12      35 ..      14      37 ..       7      43 .. 0.75
   2 !   16.4   0.0   6.4e-07    0.0057      73     130 ..     313     387 ..     290     399 .. 0.84
   3 ?   -3.3   0.0      0.69   6.2e+03     157     175 ..     412     430 ..     412     430 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.2
                    HHHHHHTTSSEEEEEEEEE-SSST CS
  DNA_pol_A_exo1 12 elieelknlkvvavDtEttsldli 35
                    +++  ++ +++v +D E ++++++
      KHJ32627.1 14 DILVNISRASYVTFDFEMSGITTR 37
                    4555566778********999875 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 6.4e-07
                     HT-TTSEEEESSHHHHHHHHHHH...........HTS--SSEEEHHHHHHHTTHSTT......SSHHHHHHHHHS CS
  DNA_pol_A_exo1  73 ledenitkvghnakfDlevlard...........fgielenlfdtmlaayvldyers......hsLdsLaekylg 130
                     l+ +n+++vghn+ +Dl++l+++           f  e+ +lf++++++++l++          sL++ +e +l+
      KHJ32627.1 313 LKLRNHIIVGHNIFMDLAFLYKTfvgplpsqvedFRKEIHRLFPRVIDTKFLATHGLeskyirSSLKEVLEPFLK 387
                     556799*********************************************998655566777777777777776 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 0.69
                     HHHHHHTHHHHHHHHHHHH CS
  DNA_pol_A_exo1 157 AaeDadvllrlfkkLtkel 175
                     A+ D +++++lf kL  +l
      KHJ32627.1 412 AGYDSWMTAELFVKLSAKL 430
                     67899*********99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (565 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       479  (0.0267165); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 4016.69
//
Query:       KHJ32628.1  [L=110]
Description: putative mitochondrial 54s ribosomal protein 31 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      8e-44  148.2   3.0      9e-44  148.1   3.0    1.0  1  L31       Mitochondrial ribosomal protein L31
  ------ inclusion threshold ------
       0.26   11.1   5.1       0.36   10.6   0.2    2.2  2  YpzI      YpzI-like protein


Domain annotation for each model (and alignments):
>> L31  Mitochondrial ribosomal protein L31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.1   3.0     1e-47     9e-44       2     102 .]      10     110 .]       9     110 .] 0.98

  Alignments for each domain:
  == domain 1  score: 148.1 bits;  conditional E-value: 1e-47
         L31   2 vllgGllwKipwrlsktqkarqrkRlkavDevieavkeslkkkgvslkalekakaelpkesemspkdKYtvFskkskgYRKsihkvpkwtklslrenpk 100
                 +l+gGllwKipwrlsk qkarqrkRl+avD+v+++v+++l+k+g++lk+le +k+ +p+e+em pkdKYt+F++k+k+YRK ++k+pkwt++s+r np 
  KHJ32628.1  10 SLFGGLLWKIPWRLSKFQKARQRKRLRAVDNVVSVVDKALAKQGTTLKSLEIWKKVMPTEQEMLPKDKYTMFDRKEKKYRKCLRKLPKWTRVSQRINPP 108
                 579***********************************************************************************************9 PP

         L31 101 gf 102
                 g+
  KHJ32628.1 109 GY 110
                 87 PP

>> YpzI  YpzI-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.2     4e-05      0.36       3      30 ..      28      55 ..      27      64 .. 0.88
   2 ?    2.1   1.0     0.019   1.7e+02       4      13 ..      82      91 ..      81      94 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 4e-05
        YpzI  3 kDRQEkkLkaskrvESDRDQslsykGAt 30
                k RQ k+L+a   v S  D +l  +G t
  KHJ32628.1 28 KARQRKRLRAVDNVVSVVDKALAKQGTT 55
                67***********************977 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.019
        YpzI  4 DRQEkkLkas 13
                DR Ekk ++ 
  KHJ32628.1 82 DRKEKKYRKC 91
                9*****9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       763  (0.0425568); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 847.86
//
Query:       KHJ32629.1  [L=122]
Description: hypothetical protein EV44_g3232 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1124  (0.0626917); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.20s 00:00:00.58 Elapsed: 00:00:00.35
# Mc/sec: 1034.93
//
Query:       KHJ32630.1  [L=182]
Description: putative pos9-activating factor fap7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-26   93.8   0.2      2e-26   93.1   0.0    1.5  2  AAA_18           AAA domain
    1.4e-08   35.2   0.2    8.1e-08   32.8   0.0    2.0  2  AAA_17           AAA domain
    1.7e-05   25.0   0.2     0.0033   17.5   0.0    2.3  2  ADK              Adenylate kinase
     0.0001   22.7   0.1     0.0058   17.1   0.0    2.2  2  AAA              ATPase family associated with various cellul
      0.001   18.8   0.1       0.15   11.7   0.0    2.1  2  Thymidylate_kin  Thymidylate kinase
     0.0022   17.9   3.0       0.68    9.8   0.1    2.1  2  dNK              Deoxynucleoside kinase
     0.0027   17.9   0.0      0.031   14.4   0.0    2.2  1  AAA_33           AAA domain
  ------ inclusion threshold ------
      0.012   15.8   0.0      0.024   14.9   0.0    1.6  2  AAA_28           AAA domain
      0.028   14.3   0.2      0.069   13.1   0.0    1.8  2  NTPase_1         NTPase
      0.031   14.2   0.0      0.064   13.2   0.0    1.5  1  Rad17            Rad17 P-loop domain
      0.034   14.3   0.2       0.23   11.6   0.2    2.1  1  SKI              Shikimate kinase
      0.036   14.3   0.4       0.11   12.8   0.1    1.9  2  AAA_22           AAA domain
      0.066   13.5   0.0       0.11   12.7   0.0    1.4  1  Hydin_ADK        Hydin Adenylate kinase-like domain
       0.14   12.6   0.3       0.19   12.1   0.3    1.7  1  AAA_16           AAA ATPase domain


Domain annotation for each model (and alignments):
>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.1   0.0   1.5e-29     2e-26       2     129 ..       8     126 ..       7     127 .. 0.96
   2 ?   -2.4   0.0       5.3   6.7e+03      59      59 ..     155     155 ..     130     178 .. 0.52

  Alignments for each domain:
  == domain 1  score: 93.1 bits;  conditional E-value: 1.5e-29
      AAA_18   2 lltGtpGvGKttlakeLskrlgf.gvnlrdvakenglllevdpealdeskrldedkldklldaleenssaleegknlvidghlaeleseaakdikkvvL 99 
                 ++tGtpGvGK++ ++ L++++g+ +v ++d++k++g+ +++d++   +s+++dedk   lld +e       +++ ++id+h ++l++ +++d++ +vL
  KHJ32630.1   8 IITGTPGVGKSSHCEILAQKTGLqHVSINDIVKDRGCHEGYDEK--FKSLIVDEDK---LLDSIEDM----VKAGGCIIDWHACDLFPKSWIDLV-IVL 96 
                 89*******************99*********************..**********...88888885....5699********************.*** PP

      AAA_18 100 taspeelleRlekRgyeeakikeneeaeil 129
                 +++   l++Rl++R+y+e k +en ++ei+
  KHJ32630.1  97 RVNSTLLYDRLKARNYSETKLQENLDVEIM 126
                 ****************************98 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 5.3
      AAA_18  59 k 59 
                 +
  KHJ32630.1 155 S 155
                 1 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.0   6.3e-11   8.1e-08       1     122 [.      10     110 ..      10     123 .. 0.73
   2 ?    1.5   0.1      0.29   3.8e+02      48      97 ..     116     165 ..      97     176 .. 0.53

  Alignments for each domain:
  == domain 1  score: 32.8 bits;  conditional E-value: 6.3e-11
                 EE-TTSSHHHHHHHHHHHHTEEEEEHHHHHHHHHHTTTSHSSHHHHCTSHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-SEEEETTEEEESSHHHHHHH CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthlsaGdllreeakrgglakardemrklpleekkelqkeaaekiaeeakkkgvlvdghprikeqagfldglpkevlee 99 
                 +G PG+GK+  ce l++k g++h+s  d++ +   ++g    +++++ l  +e+k     + ++i+++ k +g ++d h++        d +pk     
  KHJ32630.1  10 TGTPGVGKSSHCEILAQKTGLQHVSINDIVKDRGCHEGY---DEKFKSLIVDEDK-----LLDSIEDMVKAGGCIIDWHAC--------DLFPKS---W 89 
                 69***********************99999888777777...4666666555554.....455666666679*******96........456652...3 PP

                 H..SEEEEEE--HHHHHHHHHHH CS
      AAA_17 100 lkpdaiilleadpeeilerrlkd 122
                   +d++i+l ++   +++r++ +
  KHJ32630.1  90 --IDLVIVLRVNSTLLYDRLKAR 110
                 ..377788888776666666554 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.29
                 TSHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-SEEEETTEEEESSHHHHH CS
      AAA_17  48 klpleekkelqkeaaekiaeeakkkgvlvdghprikeqagfldglpkevl 97 
                 kl+++ + e+++ + ++ ++  +k+ v+  +  +i++ + +++++++++ 
  KHJ32630.1 116 KLQENLDVEIMEVLLQEARDSYDKEIVIELTSDSIDDLDSNIERIESWIA 165
                 34444444444444444444444445555555555555555555555555 PP

>> ADK  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   2.6e-06    0.0033       1      39 [.       9      47 ..       9      72 .. 0.79
   2 ?    5.6   0.1     0.013        16     103     123 ..      90     151 ..      84     179 .. 0.72

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 2.6e-06
                EEESTTSSHHHHHHHHHHHHTSEEEEHHHHHHHHHHCT- CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK  1 llGaPgaGKGtqaeklvkkyglahlstGdllRaevksgt 39
                + G+Pg GK   +e l++k gl+h+s  d+++++  ++ 
  KHJ32630.1  9 ITGTPGVGKSSHCEILAQKTGLQHVSINDIVKDRGCHEG 47
                67****************************998765554 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.013
                 ESEEEEEE--HHHHHHHHHT.........................................G CS
                 xxxxxxxxxxxxxxxxxxxx.........................................x RF
         ADK 103 ldlvleldvpeevlveRltg.........................................D 123
                 +dlv+ l+v++ +l +Rl                                           D
  KHJ32630.1  90 IDLVIVLRVNSTLLYDRLKArnysetklqenldveimevllqeardsydkeivieltsdsiD 151
                 899***************99888877777777777777777777777766666666665552 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   4.5e-06    0.0058       2      30 ..       8      36 ..       7      76 .. 0.89
   2 ?    3.9   0.1     0.052        67      78     125 ..     118     161 ..     100     166 .. 0.71

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 4.5e-06
                EEESSTTSSHHHHHHHHHHHHTHEEEEEE CS
         AAA  2 llyGppGtGKTllakavakelgvefleis 30
                +++G+pG+GK++ ++ +a+++g + ++i+
  KHJ32630.1  8 IITGTPGVGKSSHCEILAQKTGLQHVSIN 36
                789*****************998888776 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.052
                 CCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHHHSTTSS CS
         AAA  78 eseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallrgRfd 125
                 +++ + +++++Ll+e  +  +k  ++++ +++ ++d+ld+ +   R++
  KHJ32630.1 118 QENLDVEIMEVLLQEARDSYDK--EIVIELTSDSIDDLDSNIE--RIE 161
                 5555667889999988888773..4666677777*****9998..454 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0      0.01        13       3      20 ..      11      28 ..       9      63 .. 0.86
   2 !   11.7   0.0   0.00012      0.15     119     185 .]      91     157 ..      73     157 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.01
                     ESTTSSHHHHHHHHHHHH CS
  Thymidylate_kin  3 GlDGaGKttqaellkerl 20
                     G  G+GK++++e+l+++ 
       KHJ32630.1 11 GTPGVGKSSHCEILAQKT 28
                     788***********9985 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00012
                      SEEEEEESSHHHHHTSCCTTSSTTTSHHHHHHHHHHHHHHHHHHHH..TTSTEEEEETTS-HHHHHHHH CS
  Thymidylate_kin 119 dltflldvdpevalkRlakrdeldeeeeeqldflrkvrerylelak..ederiliidasksieevheeI 185
                      dl++ l v     + Rl++r+ ++ + +e+ld   +++e++l++a+  +d++i+i  +s+si+++ ++I
       KHJ32630.1  91 DLVIVLRVNSTLLYDRLKARNYSETKLQENLD--VEIMEVLLQEARdsYDKEIVIELTSDSIDDLDSNI 157
                      99********************8888888888..566777777776699*************9998776 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.1   0.00053      0.68       2      28 ..       8      34 ..       7      64 .. 0.83
   2 !    8.6   0.7    0.0012       1.5     118     191 ..      86     159 ..      75     178 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00053
                EEEESTTSSHHHHHHHHHCCSTCEEEE CS
         dNK  2 vveGnIgaGKstlvklLskklgvkvfe 28
                 + G+ g+GKs+  ++L++k+g ++++
  KHJ32630.1  8 IITGTPGVGKSSHCEILAQKTGLQHVS 34
                68999*****************76653 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0012
                 HHCCH-SEEEEEE--HHHHHHHHHHCTTCCCT...TS-HHHHHHHHHHHHHHHTSGGCS-EEEEETSS.-TTTHCCH CS
         dNK 118 eelakpdlliYLkasletclerikkRgreeek...kieldYlekLhekyeewlkklnevpvlvidveeldlvaeeek 191
                  + + +dl+i L+++   ++ r+k R+ +e k   + + + +e L ++  ++++k + v  l+ d  + dl+ + e 
  KHJ32630.1  86 PKSW-IDLVIVLRVNSTLLYDRLKARNYSETKlqeNLDVEIMEVLLQEARDSYDK-EIVIELTSDSID-DLDSNIER 159
                 3445.9*********************9999888899999999999999999888.222233333222.34444444 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   2.4e-05     0.031       3      41 ..       8      47 ..       7     133 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.4e-05
      AAA_33  3 llvGlpGsGKstlaerllkklgavllssdtlrr.rlfgtd 41
                ++ G pG+GKs   e l++k+g +++s +++ + r + ++
  KHJ32630.1  8 IITGTPGVGKSSHCEILAQKTGLQHVSINDIVKdRGCHEG 47
                678************************9987774544433 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   1.9e-05     0.024       3      27 ..       8      33 ..       6      71 .. 0.85
   2 ?   -2.2   0.0       3.3   4.2e+03     102     102 ..     127     127 ..     100     170 .. 0.56

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.9e-05
      AAA_28  3 vitGgestGKTtlleaLaar.gypvv 27
                +itG+++ GK++ +e La++ g ++v
  KHJ32630.1  8 IITGTPGVGKSSHCEILAQKtGLQHV 33
                8*****************87687766 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3.3
      AAA_28 102 a 102
                 +
  KHJ32630.1 127 E 127
                 1 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   5.4e-05     0.069       2      48 ..       7      53 ..       6      78 .. 0.78
   2 ?   -1.6   0.1       1.8   2.3e+03     142     167 ..     115     141 ..      91     142 .. 0.62

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 5.4e-05
                EEEE--TTSSHHHHHHHHHHHH...GGGEEEEEEEEE-------EEE CS
    NTPase_1  2 vfiTGppGvGKtTlvkkvlellkssgvkvgGfyteevreggrrigFk 48
                ++iTG pGvGK+  ++ ++++   + v+++ ++  +  ++g    Fk
  KHJ32630.1  7 LIITGTPGVGKSSHCEILAQKTGLQHVSINDIVKDRGCHEGYDEKFK 53
                89**************9999988888887777666666666555555 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.8
                 HHHHT-TT-EEEE--.TTTTTTHHHHH CS
    NTPase_1 142 eeirerkdvkvfevt.eenrdalleei 167
                  +++e+ dv+++ev  +e rd+  +ei
  KHJ32630.1 115 TKLQENLDVEIMEVLlQEARDSYDKEI 141
                 456666677777754145566666655 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0     5e-05     0.064      47     107 ..       6      67 ..       1      71 [. 0.80

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 5e-05
       Rad17  47 iLLisGPsGCgkstvvkvLskelgiklrewlnpvslkepdn.qksdfkgltekesrflsqie 107
                  L+i+G +G gks   ++L+++ g +     + v+ +  +    + fk+l+  e+++l  ie
  KHJ32630.1   6 NLIITGTPGVGKSSHCEILAQKTGLQHVSINDIVKDRGCHEgYDEKFKSLIVDEDKLLDSIE 67 
                 599**********************9987666666666655566779999999998877666 PP

>> SKI  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   0.00018      0.23       1     133 [.      13     139 ..      13     169 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00018
                 TTSSHHHHHHHHHHHHTSEEEEHHHHHHHHHT.S-HHHHHHHHHHHHHHHHHHHHHHHHCCCSSEEEEE-TTGGGSHHHHHHHHHHSE..EEEEE--HH CS
         SKI   1 mGaGKstvGkllAkklglefiDlDeliekrtg.ksiaeifeeegeegFrelEsevlkelleeeglViatGGGavlseenrellkekgi..viyLdvsle 96 
                 +G+GKs+  ++lA+k gl+ + + +++++r       e f+     +    E ++l+++ ++    +  GG ++++  + +l  ++ i  vi L+v+ +
  KHJ32630.1  13 PGVGKSSHCEILAQKTGLQHVSINDIVKDRGChEGYDEKFK-----SLIVDEDKLLDSIEDM----VKAGG-CIIDWHACDLFPKSWIdlVIVLRVNST 101
                 69********************9999877754244444444.....4455566777777666....66644.445555555555444344999999999 PP

                 HHHHHHHHTTS.SGGGCSCHHHHHHHHHHHHHHHHHCC CS
         SKI  97 ellerlkadke.RPllqekskeeelleelaereplyee 133
                  l++rlka++     lqe+   e ++  l+e +++y++
  KHJ32630.1 102 LLYDRLKARNYsETKLQENLDVEIMEVLLQEARDSYDK 139
                 99999998888666777666644444444455555555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   8.3e-05      0.11       4      28 ..       3      27 ..       1      43 [. 0.87
   2 ?   -1.3   0.0       1.9   2.5e+03      39      51 ..     122     134 ..     101     175 .. 0.49

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 8.3e-05
      AAA_22  4 tagilvvtGesGtGKTtllrrlleq 28
                t+  l++tG +G+GK+  ++ l+++
  KHJ32630.1  3 TKPNLIITGTPGVGKSSHCEILAQK 27
                77889************99998876 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.9
      AAA_22  39 rpevvfvtlpsst 51 
                 ++e+++v l++  
  KHJ32630.1 122 DVEIMEVLLQEAR 134
                 3333333222222 PP

>> Hydin_ADK  Hydin Adenylate kinase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   8.7e-05      0.11       2      36 ..       7      41 ..       6      48 .. 0.95

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 8.7e-05
   Hydin_ADK  2 iivhGaPlsGKtatavtLakkYeaAlltiDsvvle 36
                +i+ G+P  GK++ +  La+k +   ++i ++v++
  KHJ32630.1  7 LIITGTPGVGKSSHCEILAQKTGLQHVSINDIVKD 41
                79*******************************98 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.3   0.00015      0.19      25      46 ..       5      26 ..       1     175 [. 0.92

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00015
      AAA_16 25 elvllsGesGvGKsslvrellr 46
                ++++++G +GvGKss  + l++
  KHJ32630.1  5 PNLIITGTPGVGKSSHCEILAQ 26
                899***********98876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       946  (0.0527637); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.37
# Mc/sec: 1472.38
//
Query:       KHJ32631.1  [L=562]
Description: putative tyrosyl-dna phosphodiesterase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-93  313.7   0.0    2.2e-93  313.5   0.0    1.0  1  Tyr-DNA_phospho  Tyrosyl-DNA phosphodiesterase
    0.00012   22.0   0.1    0.00087   19.2   0.1    2.1  2  PLDc_2           PLD-like domain


Domain annotation for each model (and alignments):
>> Tyr-DNA_phospho  Tyrosyl-DNA phosphodiesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  313.5   0.0   2.5e-97   2.2e-93       2     424 .]     140     552 ..     139     552 .. 0.87

  Alignments for each domain:
  == domain 1  score: 313.5 bits;  conditional E-value: 2.5e-97
                      EE--TTTT----------EE-HHHHH--TTEEEEEEE-S-EEHHHHHTTS.-T-...-EEEEEE..............ETTSEE-TEEEEEE-- CS
  Tyr-DNA_phospho   2 lkltkirdlpeesernkdtitlkdilgdplleeavqfnFlfdlefllsqldedvrrkvkvvivhgakkeedeererleekakrypnvelieakm 95 
                      +k+t++++++    r++d+i+++++l++++l  av+++F++d+ ++l +l  +    ++v++v +ak++++  +++  ++a++   ++++++ m
       KHJ32631.1 140 IKKTWAQGFS----RKGDDISIEEVLQKDDLTLAVLSAFQIDTRWILGKLSDK----TRVYWVLQAKTDDE--KQEWMSQASS--MYKFCFPSM 221
                      6899999988....679*********************************666....8******9887777..4455566666..79******* PP

                      -.TT--B---EEEEEETTSEEEEEEESS-BSHHHHHS...SB-E..EEE---EEE......S--SS--HHHHHHHHHHHTT..-HHHHTHHHHH CS
  Tyr-DNA_phospho  96 pepfgthHsKmmilfyeddslrvvihtaNlieaDwgn...mtqg..vwrspllpllesskeseeesgtrFkrdLleYLkaygkkklkklieklk 184
                       +++ ++HsK+++l+++  +lr+v++taNl+++Dwg+   m ++  ++++p+l++   +++ + e+ t+F ++L+ +L+a g +  +++i++l+
       KHJ32631.1 222 RGNIRCMHSKLQLLAHPS-HLRIVVPTANLVSYDWGEngiMENMvfLIDLPRLEN---NQTLALEDLTNFGKELTFFLEAKGLP--ENVITSLR 309
                      *****************9.*****************9454555566667777777...8999**********************..******** PP

                      TEE-GGGT.-EEEEE---TTS--.....HHHHHHHHHHHTCT..T----EEEEEEE-SBB---S-.SSS---HHHHTHHHHHTTSS........ CS
  Tyr-DNA_phospho 185 kyDfsevr.valiaSvPgrhkgs.ktkwGlakLkkalkelplekeekskeleivaqvSSigslgstekwlknefleslspalqgkd........ 268
                      k+Dfs+++ + +++S++g+h+gs  +++G+++L++++++l+l   +ks+++ i++ ++S+g++ +       +f+e+l++a+qg+         
       KHJ32631.1 310 KFDFSRTNnIGFVHSIGGSHTGSlLNRTGFCGLASTINQLGL---KKSDPILIDFITASLGNISP-------KFIETLYTAAQGTLelppiksq 393
                      ******************************************...455579**********9999.......8*********999899999865 PP

                      ..---.HHH.....HHTEEEE..EE--BSGGGTTSTTGGGGGGG-B---...SGGHHHHHH.HTS--EEEE-TT..TTTTT--B--EE.EEEE- CS
  Tyr-DNA_phospho 269 ..ksk.eee.....ekkskpkfkiifPtveevrrsldgyasggsihfkiqsaqqqkqleel.kpylckwkqdseeeagRkraapHiKt.yirfs 352
                        + + + +     e   +  ++i+fP+ ++v++sl+g  +gg+i+f++++++++++l+++ ++           +++R+++++H+K+ ++r+ 
       KHJ32631.1 394 nnS-StN-KksalrEC-VNNFCRIYFPSRKTVESSLGGLGAGGTICFQSRWWSSNHFLQHIiRDC----------KSRRQGMLMHSKLwFVRS- 473
                      541.132.13456433.333347***********************************9987554..........489**********99999. PP

                      -STTSEESEEEEES--BSHHHH--S.........SS--SSBEEEEEEEGG.........------SEEESS-SSEEE-- CS
  Tyr-DNA_phospho 353 sktlkkidWalltSaNLSkqAWGeleka...ke.elrirsyElGVlvlpk...kdlpeeeektevgvrvPydlplepYs 424
                      +k +++ +Wa+++SaNLS++AWG+++ +   k+ +++++++E+GV+++ k   +++ ee+++++ +++vP+  p  +Y+
       KHJ32631.1 474 QKPCSQHAWAYIGSANLSESAWGRVSMDkntKKpRINCANWECGVIFPAKsnhNKVDEEMAEFVDSIPVPMIAPGDSYE 552
                      8889*********************955334337****************4422244459***************9995 PP

>> PLDc_2  PLD-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.09   8.1e+02      60     106 ..     205     255 ..     163     277 .. 0.56
   2 !   19.2   0.1   9.7e-08   0.00087      80     128 ..     462     532 ..     436     537 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.09
      PLDc_2  60 elkellleagvevrvfet.ll...gslHaKlylid.gk..tvivGSsNltkrgl 106
                 e++++ +++  +  +  + +    + +H+Kl l    +    +v ++Nl    +
  KHJ32631.1 205 EWMSQ-ASSMYKFCF--PsMRgniRCMHSKLQLLAhPShlRIVVPTANLVSYDW 255
                 33333.333333222..1111334778999888753223444455555555444 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 9.7e-08
      PLDc_2  80 gslHaKlylidgk.......tvivGSsNltkrgl...............dlnlElnvviedkelakeleee 128
                   +H+Kl+ ++ +       ++++GS+Nl+++++                +n+E++v++  k   ++++ee
  KHJ32631.1 462 MLMHSKLWFVRSQkpcsqhaWAYIGSANLSESAWgrvsmdkntkkprinCANWECGVIFPAKSNHNKVDEE 532
                 56********9777888888**************8888777777777777777777777776666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (562 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.22s 00:00:00.76 Elapsed: 00:00:00.37
# Mc/sec: 4572.02
//
Query:       KHJ32632.1  [L=181]
Description: putative inosine triphosphate pyrophosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-58  195.5   0.0    8.7e-58  195.3   0.0    1.0  1  Ham1p_like  Ham1 family


Domain annotation for each model (and alignments):
>> Ham1p_like  Ham1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.3   0.0   4.9e-62   8.7e-58       1     185 [.       5     176 ..       5     178 .. 0.89

  Alignments for each domain:
  == domain 1  score: 195.3 bits;  conditional E-value: 4.9e-62
                 EEEC-S-HHHHHHHHHHTTTECCCE.EECCCCEE----BSSSHHHHHHHHHHHHHH.HTS-EEEEEEEEEEGGGTTTBGGGTTTTTH.TTCHHHHHHHH CS
  Ham1p_like   1 ivfaTgNkgKlrevkeilaeellevkslkelelpeveEtqgtfeenalkKaraaae.aglpvladDsgLevdaLnglPGvysarfag.egaedeenlak 97 
                 ++f+T+Nk+Kl ev++il++    +++l+  ++ e++E+qgt+ee++l+K+r+aae ++ pvl++D++L+++aL++lPG+y+++f++ +g++   +l++
  KHJ32632.1   5 LNFITSNKNKLLEVRQILGD----LVDLQ-SQSLELPEIQGTIEEISLDKCRRAAEkIQGPVLVEDTCLCFNALQQLPGPYIKWFLQaLGHQ---GLNN 95 
                 68****************75....33332.2344778******************855666************************8755555...**** PP

                 HHHHCTHTTS--EEEEEEEEEEEETTTTEEEEEEEEEEEEE-SS.--SSSSTTGGGEEETT-SSBTTTS.CHHHHHHSHHHHHHHHHH CS
  Ham1p_like  98 lleeleeeeedrsArfvcvlaladpeeeeellfeGeveGeiveeprgeggfGyDpiFvpeegektfaelskeeknaiShRgkAlekll 185
                 ll+++   + d+sA++vc++ ++++ + e l+f+G+++G+iv+ prg+ +fG+D iF+  + +kt+ae++k+ekn++ShR++Alekl+
  KHJ32632.1  96 LLAAY---P-DKSAQAVCTFSYCKGPGYEPLIFQGRTNGTIVP-PRGSADFGWDAIFEC-N-GKTYAEMDKSEKNKVSHRFRALEKLK 176
                 *****...4.589************88888************7.***************.5.79**********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.35
# Mc/sec: 1537.49
//
Query:       KHJ32633.1  [L=357]
Description: putative mob1 phocein family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.7e-43  146.3   0.3    2.6e-42  144.7   0.3    1.7  1  Mob1_phocein  Mob1/phocein family


Domain annotation for each model (and alignments):
>> Mob1_phocein  Mob1/phocein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.7   0.3   1.4e-46   2.6e-42       4     169 .]      97     319 ..      94     319 .. 0.96

  Alignments for each domain:
  == domain 1  score: 144.7 bits;  conditional E-value: 1.4e-46
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Mob1_phocein   4 lgsgdlkeavklPkgedlneWlavhvvdffneinllygtise.......fcteqscptmsagpkyeYlwadeevkkpvklsApeYidllmdwiesql 93 
                   + +g++ ++ + Pk +++ eW+a++vv+ ++++  ++g+i++       +c++++cp+msag +++++w + + k+pv+++A eYi+l+  wi+ ++
    KHJ32633.1  97 IVKGNFMTLSTRPKTVEQGEWIAHQVVEHYRNLWNFVGVIHDkdedgtsICNSSTCPRMSAGANFSFTWLNPR-KEPVEVPAHEYISLMQRWISGKI 192
                   6789***********************************97534455568*********************75.9********************** PP

                   xx..................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxx RF
  Mob1_phocein  94 nd..................................................lfpskagspfpknflkvvkkilkrlfrvyaHiYihHfee.iaele 139
                   ++                                                  + +  + s fp +f +v+++i++++frvyaH+Y++Hf + + +l+
    KHJ32633.1 193 DNtaifptdpntvlyapppgnsnhahsnlnisnsnssikpgsfnsyahmgnpTDWIGKASGFPMEFFEVCQTIFRQMFRVYAHLYWSHFVDpFYHLS 289
                   ****************************************************************************************9887***** PP

                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Mob1_phocein 140 leahlntcfkhfvlfvkeFkLidkkelepl 169
                   le+ +n+cf hf+l ++e ++++  elep+
    KHJ32633.1 290 LEKSMNSCFSHFILTATEIDMLKPYELEPM 319
                   ****************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       317  (0.0176809); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2517.88
//
Query:       KHJ32634.1  [L=196]
Description: hypothetical protein EV44_g5926 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       310  (0.0172904); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1387.37
//
Query:       KHJ32635.1  [L=173]
Description: putative fungal protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-43  148.0  14.6    7.2e-43  147.0  14.6    1.5  1  Vfa1      AAA-ATPase Vps4-associated protein 1


Domain annotation for each model (and alignments):
>> Vfa1  AAA-ATPase Vps4-associated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.0  14.6     4e-47   7.2e-43       1     181 []       6     170 ..       6     170 .. 0.83

  Alignments for each domain:
  == domain 1  score: 147.0 bits;  conditional E-value: 4e-47
        Vfa1   1 NlYtlRkVaekdakaCliCykpttsVLitednkkDffYvCesHLkDkqFatpivdeeeeeaakkkkeleeeiekvkkeyeekqkkkkekekkkkekdkk 99 
                 N+Yt+RkVae++ak+C iC+kp+tsVL+++ + kDffYvC++HLkDk+F++p++ +  ++a++kk e+ +ei+++kkeye kq+ k++k +        
  KHJ32635.1   6 NIYTHRKVAETAAKSCEICFKPSTSVLLASGH-KDFFYVCQVHLKDKKFCKPLTVQ-INTATQKKWEIGDEIARLKKEYEVKQSMKNNKGE-------- 94 
                 9******************************9.7*******************999.778899999****************999884332........ PP

        Vfa1 100 dkdkkkekekdkkkekekeeekkkelkkaeeeleekeeprvkkykLhkefyqsRlerkrqaeaakeneerlqdpeefPsvPk 181
                   d  k kek + +     ++k++++kk ++ ++  e+++ k+++L + fyq+R+e+k++ae+ak+++er+q+p+ fP+vPk
  KHJ32635.1  95 --DAPKLKEKVDLEI---IDDKSSNKKKDSNPITV-ESNEPKEFSLTNIFYQQRIEKKKNAEIAKQRSERFQNPNLFPKVPK 170
                 ..2222222222211...33444455555555555.6677778**************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1293  (0.0721178); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.19s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1400.25
//
Query:       KHJ32636.1  [L=310]
Description: putative gpr1 fun34 -class plasma membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-28   99.7  24.2    2.3e-28   99.2  24.2    1.2  1  Gpr1_Fun34_YaaH  GPR1/FUN34/yaaH family
  ------ inclusion threshold ------
      0.016   15.4   6.9      0.065   13.4   6.9    2.0  1  Pkr1             ER protein Pkr1
       0.36   11.8   1.3        1.3   10.0   1.3    2.0  1  DUF4834          Domain of unknown function (DUF4834)
       0.97    8.5   4.8       0.68    9.0   0.4    2.0  2  TMEM173          Transmembrane protein 173


Domain annotation for each model (and alignments):
>> Gpr1_Fun34_YaaH  GPR1/FUN34/yaaH family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.2  24.2   5.2e-32   2.3e-28      15     205 ..      77     292 ..      66     294 .. 0.90

  Alignments for each domain:
  == domain 1  score: 99.2 bits;  conditional E-value: 5.2e-32
  Gpr1_Fun34_YaaH  15 rkfaNPaPlgllafalttfvlslvnlgargit.epnvvvglalfyGGlvqllaGiwefavgntFgatalssYGgFwlsyaailipgfgilaaY. 106
                      + ++ PaP+ l++f +++  l +  +g rg   + ++ +g  +f+GGl ++l G++ef+vg tF++++++s+GgFwl++++ l p  ++ aaY 
       KHJ32636.1  77 KGLGTPAPVALVGFLICLSPLACDLMGWRGAGgNGAAGMGSYFFFGGLLMILGGLLEFIVGKTFSFVVFCSFGGFWLTIGTTLQPFYNVGAAYa 170
                      55899************************997256788*******************************************************9 PP

  Gpr1_Fun34_YaaH 107 ..........eedeeelnnalglyllgwfiftfllllatlrstvalfllfffldltflllaigeltgsak.............vlkAggvfgii 177
                                   +  ++   g++ +  ++++f+++++++r++++ ++lfffl+++f+lla+ + +  +              ++ A+g+f ++
       KHJ32636.1 171 tapnttsleqGFATVGFTASYGFFQVFMALLCFIYFICSFRTNIVNVFLFFFLTIAFCLLAAVNWVFAEIfagdvtqihkvhrIQVAAGAFLFM 264
                      999988886544566999*******************************************9987555555577779999999*********** PP

  Gpr1_Fun34_YaaH 178 aaflawYnalaglatkensyftlpvipl 205
                      + +++wY+ +a +++     f++p  +l
       KHJ32636.1 265 TCIVGWYSFFAIMLKLMDFPFQIPIGEL 292
                      *************999998899887666 PP

>> Pkr1  ER protein Pkr1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   6.9   1.5e-05     0.065      27      68 ..     196     240 ..     186     244 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.5e-05
        Pkr1  27 sFaaLll.vllaLlvats..niHfivLlllalgLwasinWFvaeL 68 
                 +F+aLl+   ++  + t+  n+ +++ l++a++L a++nW++ae+
  KHJ32636.1 196 VFMALLCfIYFICSFRTNivNVFLFFFLTIAFCLLAAVNWVFAEI 240
                 45555440444455666666888888899**************98 PP

>> DUF4834  Domain of unknown function (DUF4834)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.3    0.0003       1.3       2      31 ..     213     242 ..     212     259 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0003
     DUF4834   2 hfLlfilifiiailviglsilsvilrtvfg 31 
                 +++ ++l+f+++i++  l+ +++++ ++f 
  KHJ32636.1 213 NIVNVFLFFFLTIAFCLLAAVNWVFAEIFA 242
                 588999**********************97 PP

>> TMEM173  Transmembrane protein 173
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.4      0.04   1.8e+02     112     135 ..     110     133 ..     104     138 .. 0.87
   2 ?    9.0   0.4   0.00015      0.68      11     116 ..     153     259 ..     144     262 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.04
                 TCHHHHHHHHHHCTHHHHCTTHHH CS
     TMEM173 112 nvAhGlAwsyYiGYLklvLPeLee 135
                 n A+G+ + +++G L ++L+ L e
  KHJ32636.1 110 NGAAGMGSYFFFGGLLMILGGLLE 133
                 779****************99755 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00015
                 XXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXX CS
     TMEM173  11 lqlgdLlkrlcllveellshvnsryrgslwkalracftlnlkslvllllllllylalssdlglslllalallslckllvll.lglqklslvevseirek 108
                 l++g+ l+  +++ + + +++n+ + ++   ++  + +++  +++++ll+ +++++++ +  ++++l ++l+  ++ll  +   + +  + +v +i+  
  KHJ32636.1 153 LTIGTTLQPFYNVGAAYATAPNTTSLEQGFATVGFTASYGFFQVFMALLCFIYFICSFRTNIVNVFLFFFLTIAFCLLAAVnWVFAEIFAGDVTQIHKV 251
                 567777788888888888888888888877777888899999999999999999999987767777777776666666665588999999999999999 PP

                 XX-TCHHH CS
     TMEM173 109 kklnvAhG 116
                 +++ vA+G
  KHJ32636.1 252 HRIQVAAG 259
                 ******99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       947  (0.0528195); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 2328.39
//
Query:       KHJ32637.1  [L=717]
Description: hypothetical protein EV44_g5903 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.9e-06   26.6   0.3    1.2e-05   25.1   0.3    1.8  1  gag_pre-integrs  GAG-pre-integrase domain
     0.0067   16.6   0.1      0.017   15.3   0.1    1.6  1  rve              Integrase core domain


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.3   1.3e-09   1.2e-05      20      57 ..     318     354 ..     290     372 .. 0.67

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 1.3e-09
  gag_pre-integrs  20 n.kssinlWHrRLGHpsfsrlkkLfkkgllpglkiskse 57 
                        + ++++WH RLGH+s+++++++++  +++g+k  +++
       KHJ32637.1 318 VyTATAERWHLRLGHMSHENIHHVSQ--NVDGVKVTDMK 354
                      23589********************7..46666654433 PP

>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   1.9e-06     0.017      22      97 ..     402     481 ..     386     487 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.9e-06
         rve  22 g....kayllvvvddfsrlilaealsdemdastvlalleravarfggve..pervlsDngseytskafrefladlgirvsft 97 
                      + y++++ +  +++ +a+++sd+ +++t++++  +a +  ++ +  ++ ++ D+      ++f +++a++ i ++ t
  KHJ32637.1 402 PglsnERYIFHFYCQLTKFNIAYVTSDR-KQKTLVNCFAQAHDLINKWGfyMQFIRVDQEAGLQ-SEFNDYCAKHSIWHEKT 481
                 2344479*********************.8888888888888777777777*********8777.8**********999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (717 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       747  (0.0416643); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.26s 00:00:00.91 Elapsed: 00:00:00.47
# Mc/sec: 4612.55
//
Query:       KHJ32638.1  [L=219]
Description: putative u1 zinc finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-05   24.5   0.4    2.7e-05   23.8   0.4    1.4  1  zf-U1     U1 zinc finger
  ------ inclusion threshold ------
      0.025   14.2   2.7      0.033   13.8   2.5    1.3  1  CCDC84    Coiled coil protein 84
        2.2    8.7   4.9       0.53   10.7   0.9    1.9  2  RXLR      RXLR phytopathogen effector protein, Avirulence act


Domain annotation for each model (and alignments):
>> zf-U1  U1 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.4   4.6e-09   2.7e-05       2      37 ..       9      43 ..       8      44 .. 0.90

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 4.6e-09
                XSEEETTTTEEESS-SHHHHHHHHTSHHHHHHHHHH CS
       zf-U1  2 pkYyCdYCdiyLthDspsvRksHngGrkHkenvkdy 37
                pkY+C+ C++++ + ++     Hn+  kH+ n k++
  KHJ32638.1  9 PKYWCKHCKTFVRDTKLET-ANHNASPKHQGNLKRF 43
                9***********7777777.9***********9987 PP

>> CCDC84  Coiled coil protein 84
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   2.5   5.5e-06     0.033      55     119 ..       7      67 ..       2     184 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 5.5e-06
      CCDC84  55 senrlWCvfCdadveelvssvacgnaleHlaseeHlkkvkkFlwkhgadmdl..kdkfriseedvek 119
                 s  + WC  C++ v++++      +  +H as+ H+ ++k+Fl++ + + d+  kdk r ++++v++
  KHJ32638.1   7 STPKYWCKHCKTFVRDTKL-----ETANHNASPKHQGNLKRFLRDLQRNHDKdeKDKER-AKSEVAR 67 
                 56789*******8877554.....445799**************877665550044433.4445545 PP

>> RXLR  RXLR phytopathogen effector protein, Avirulence activity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.9   8.9e-05      0.53      35      72 ..      27      63 ..      15     118 .. 0.77
   2 ?   -0.6   0.2      0.28   1.7e+03      44      75 ..     169     184 ..     143     214 .. 0.49

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 8.9e-05
        RXLR 35 vvskssgeaesrdaadkRfLRshk.aeeddeeseeraag 72
                +++    +  + + + kRfLR  + + ++de+ +era+ 
  KHJ32638.1 27 TANH--NASPKHQGNLKRFLRDLQrNHDKDEKDKERAKS 63
                3333..3357788899*****999544788888888874 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.28
        RXLR  44 esrdaadkRfLRshkaeeddeeseeraagknl 75 
                                  e++ee+e++ ++k+ 
  KHJ32638.1 169 G----------------ETEEEEERLISNKRK 184
                 2................333333333333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1052  (0.0586759); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1665.50
//
Query:       KHJ32639.1  [L=180]
Description: putative meiosis-specific topoisomerase spo11 meiotic recombination protein spo11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1403.67
//
Query:       KHJ32640.1  [L=248]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1812.47
//
Query:       KHJ32641.1  [L=281]
Description: putative powdery mildew-specific hypothetical protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      7e-06   25.9   4.5    1.3e-05   25.1   4.5    1.4  1  zf-CCHC     Zinc knuckle
  ------ inclusion threshold ------
       0.21   11.3   3.8       0.36   10.6   3.8    1.4  1  zf-C2H2_10  C2H2 zinc-finger


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   4.5   1.4e-09   1.3e-05       1      18 []     213     230 ..     213     230 .. 0.94

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 1.4e-09
                 SCTSSSSSSSSTTTTSTS CS
     zf-CCHC   1 rkCynCGepGHiardCpk 18 
                 rkCy+CG++GHi+ dC+k
  KHJ32641.1 213 RKCYYCGKTGHIKPDCKK 230
                 69**************96 PP

>> zf-C2H2_10  C2H2 zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   3.8     4e-05      0.36       5      22 ..     214     231 ..     210     231 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 4e-05
  zf-C2H2_10   5 tCSYChetGHtRAkCekR 22 
                 +C YC +tGH    C+k+
  KHJ32641.1 214 KCYYCGKTGHIKPDCKKK 231
                 8**********9999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       866  (0.0483016); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2145.84
//
Query:       KHJ32642.1  [L=323]
Description: hypothetical protein EV44_g3665 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      568  (0.0316805); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2524.34
//
Query:       KHJ32643.1  [L=413]
Description: hypothetical protein EV44_g6208 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       541  (0.0301746); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2992.05
//
Query:       KHJ32644.1  [L=315]
Description: hypothetical protein EV44_g4321 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.2e-28   97.6   0.0    1.1e-27   97.0   0.0    1.3  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
      0.074   12.8   0.1       0.34   10.7   0.0    2.2  2  DUF3368   Domain of unknown function (DUF3368)


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.0   0.0   1.3e-31   1.1e-27       1     222 []      91     252 ..      91     252 .. 0.97

  Alignments for each domain:
  == domain 1  score: 97.0 bits;  conditional E-value: 1.3e-31
                 EE-TT.S-EEE.......-THHHHCTB--.........-------HHHH.............HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET CS
       RVT_1   1 ipKkgpgsyRp.isllsvdykalnkliakrLkdvlekllsenqpgfrpgrstldavedllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvp 98 
                 i+K++ g+ R  +     dy+aln++++k         + +++p +++              l+  ++a +++k+D++ aF++ ++++ ++ +taf+++
  KHJ32644.1  91 IKKPQ-GGLRFcV-----DYRALNAITKK---------DRYPLPLIKET-------------LRMVANASYISKIDVRAAFHRLRVAKGDEWKTAFRTR 161
                 89999.*****55.....***********.........***********.............7778999****************************** PP

                 .........................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESS.HHHHHHHHHHHHHHHHHTT- CS
       RVT_1  99 tklinliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililsks.keelqelleaveewlkesgl 196
                                           g+ye+ ++ +G++ +P+ f++ +n++l  l        +++Y DD++i+s++  +++ + ++ v ++l+ +gl
  KHJ32644.1 162 -------------------------FGSYEWLVTSFGLAGAPAAFQRWINQVLGNLLGD----ICAAYLDDVIIFSEGdLDDHWNKVRQVLDRLRAAGL 231
                 .........................9*******************************95....9**************9999***************** PP

                 -BEGGG-EEE.....ESSEEETTEEE CS
       RVT_1 197 kinpeKtklvlftvkseevkyLGvtl 222
                 ++ p+K+ ++     ++e+kyLG+++
  KHJ32644.1 232 RLDPQKCDFA-----KKEMKYLGFII 252
                 **********.....9*******986 PP

>> DUF3368  Domain of unknown function (DUF3368)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.51   4.6e+03      15      30 ..      60      74 ..      58      81 .. 0.57
   2 ?   10.7   0.0   3.8e-05      0.34      19      40 ..     218     239 ..     207     245 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.51
     DUF3368 15 GlIpsvkplldaLiqa 30
                Gl+  ++  l +L+++
  KHJ32644.1 60 GLLV-LRKTLSELLDK 74
                5555.67777777444 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 3.8e-05
     DUF3368  19 svkplldaLiqaGfrispklya 40 
                 +v+++ld+L++aG r+ p+ ++
  KHJ32644.1 218 KVRQVLDRLRAAGLRLDPQKCD 239
                 49***************98666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2452.99
//
Query:       KHJ32645.1  [L=693]
Description: putative glutaminase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-78  263.6   6.3    2.5e-78  262.9   6.3    1.3  1  DUF5127   Domain of unknown function (DUF5127)
    4.1e-75  251.2   0.2    9.4e-75  250.0   0.2    1.7  1  DUF4965   Domain of unknown function (DUF4965)
    1.4e-61  207.8   1.4    1.4e-61  207.8   1.4    2.2  2  DUF1793   Domain of unknown function (DUF1793)
    1.7e-05   24.3   0.8    6.6e-05   22.4   0.8    2.0  1  DUF4964   Domain of unknown function (DUF4964)


Domain annotation for each model (and alignments):
>> DUF5127  Domain of unknown function (DUF5127)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  262.9   6.3   5.7e-82   2.5e-78       1     227 []     106     337 ..     106     337 .. 0.97

  Alignments for each domain:
  == domain 1  score: 262.9 bits;  conditional E-value: 5.7e-82
     DUF5127   1 tqtiftftaggkveltvtFlSPvlpddldrqSlpfsYltvevkstdgkshsVqvYsdisaewasgdesqevewstt.t.gglayhkvgrqnqevlsekn 97 
                 t++iftf+a++kvel++tFlSPv+pddl+rqSl  +Yl+v ++s+dg++h+Vq+Y+disaew+sgd++++++w+ + t ++++yhkv rq+q  +se  
  KHJ32645.1 106 TKSIFTFNAEDKVELQATFLSPVTPDDLKRQSLTSTYLNVAIRSLDGAAHDVQLYTDISAEWISGDNNSVAQWNFGrTdDNISYHKVFRQTQLLFSEVA 204
                 89*************************************************************************97767******************* PP

     DUF5127  98 dradwGyaylatkakss.ltyqsgedtevrkqFvkngklantkdtnfraisddwpvfalahdlgsvssesksvvfaiGyvrdpaiqylg....qnlrpy 191
                 d+a+wG++y+at+ +   lt+qsg+d+ vr++F+++gkl+n++d n+r+i++++pvf+++ dlgsv + sk+++f+i + ++ a+qy++     +l+++
  KHJ32645.1 205 DQAEWGSWYWATR-DMVgLTHQSGADEVVRNTFINTGKLENSQDVNYRPIRQNYPVFGFSLDLGSVIE-SKNTLFTINLGQELAMQYATtsgkVQLPSL 301
                 *************.5556************************************************66.488****************999999***** PP

     DUF5127 192 WrskyssiedalsaflkdyaaalkrsealDkkirad 227
                 Wrs+++  e+a+s+f++d++ a++ ++++D++i++d
  KHJ32645.1 302 WRSYFPIYENAVSFFYNDFDYASSTATNIDNQIATD 337
                 *********************************987 PP

>> DUF4965  Domain of unknown function (DUF4965)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  250.0   0.2   2.1e-78   9.4e-75       2     174 .]     342     512 ..     341     512 .. 0.99

  Alignments for each domain:
  == domain 1  score: 250.0 bits;  conditional E-value: 2.1e-78
     DUF4965   2 ggekYadllalsvRqafaalelvskdetsevllflKeissngnvntvDviypalPlflylnpellkllLeplleyqesgkypkkfaahDlGtsYPnatg 100
                 gg++Y ++++ls+Rqaf+a++lv   ++s+ +lf+Keiss+gn++tvDviyp++P+ +yl+p+l kllL+pl+e qesg ypkk ++hDlG+++Pnatg
  KHJ32645.1 342 GGQDYLTITSLSLRQAFGATQLV--GDKSKQYLFMKEISSDGNTQTVDVIYPFYPIIMYLQPSLAKLLLDPLFETQESGLYPKKSSMHDLGSHFPNATG 438
                 89*********************..678*********************************************************************** PP

     DUF4965 101 qndgedeqmpveesGnmlimalayaqasgdasllekyydllkqWadYLvengldpanqlstddfagalanqtnL 174
                   dg de++p+ee+Gnmlim+lay+++++d+s+l+++y++lkqW++YLve +l+p++qlstddfag+lanqtnL
  KHJ32645.1 439 YPDGLDEPQPLEECGNMLIMTLAYSKRANDTSYLDQHYQILKQWTEYLVEFALIPDDQLSTDDFAGHLANQTNL 512
                 *************************************************************************8 PP

>> DUF1793  Domain of unknown function (DUF1793)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.59   2.7e+03      12      63 ..     150     206 ..     145     265 .. 0.64
   2 !  207.8   1.4   3.1e-65   1.4e-61       1     166 []     518     690 ..     518     690 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.59
     DUF1793  12 llgeeedakkysaiaeeyikk.weelai...dgthlklaYdk.edswsllYnlyaDk 63 
                 l g ++d + y++i++e+i+  ++++a      t  +++Y+k     +ll++ +aD+
  KHJ32645.1 150 LDGAAHDVQLYTDISAEWISGdNNSVAQwnfGRTDDNISYHKvFRQTQLLFSEVADQ 206
                 556667777777777777765344444433222455555555445555555555554 PP

  == domain 2  score: 207.8 bits;  conditional E-value: 3.1e-65
     DUF1793   1 iGikAmseiaellgeeedakkysaiaeeyikkweelai..dg..thlklaYdkedswsllYnlyaDkllglnlvpqsvyemqsafYktvaqkyGlplDs 95 
                 iGi+Am+ei++l+g+++d  +y++ia+++i+kw+++++  ++  + ++laY+ +d++ llYnlyaD+ll+ln+vp+ +y+mqsafY+t +++yG+plDs
  KHJ32645.1 518 IGIRAMAEISNLTGHDTDGLNYTSIAQDFISKWQTYGVaqESspPRATLAYGLNDTYVLLYNLYADSLLNLNFVPKYIYDMQSAFYTTAKENYGIPLDS 616
                 8*************************************7522667****************************************************** PP

     DUF1793  96 rhtytksdWelfaaavaskktreelissvakwvnetktdrpftdlYdtegtgglpg....frarpvvGGhFalLa 166
                 rh++tksdW++++a++++++t++++is++a++++et td  ftdlYdt +t++++     f  rpvvGGhFalLa
  KHJ32645.1 617 RHKFTKSDWQIWVASISNDDTKNTIISDLARYIRETPTDSGFTDLYDT-TTADWAAnithFNSRPVVGGHFALLA 690
                 ***********************************************9.67777767999*************97 PP

>> DUF4964  Domain of unknown function (DUF4964)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.8   1.5e-08   6.6e-05      24      77 ..      30      89 ..      21      98 .. 0.81

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 1.5e-08
     DUF4964 24 LRaPayPLvtidpylsiWsf......tdeLndesvkhwtgkdlpllgvlrVDGkvYrfmG 77
                ++ Pa+PL ++ pyl++  +         L  +  ++wtg++    g++rVDG vY +mG
  KHJ32645.1 30 VKPPAIPLAVNSPYLNVLLAdggkegGGYLARKWPNFWTGHTVGWAGMIRVDGIVYTWMG 89
                6789**********998754111111346999999************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (693 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      259  (0.0144459); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 5150.32
//
Query:       KHJ32646.1  [L=259]
Description: putative had-superfamily subfamily iia hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-12   47.7   0.0    3.9e-12   46.1   0.0    1.8  2  Hydrolase_like  HAD-hyrolase-like
  ------ inclusion threshold ------
       0.17   11.8   0.0       0.39   10.6   0.0    1.6  1  Lipase_3        Lipase (class 3)


Domain annotation for each model (and alignments):
>> Hydrolase_like  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.58   5.2e+03      43      55 ..       5      17 ..       4      30 .. 0.74
   2 !   46.1   0.0   4.3e-16   3.9e-12       2      75 .]     155     242 ..     154     242 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.58
                    -EEEEESSSSS-T CS
  Hydrolase_like 43 wksvLVltGvtrp 55
                    +k+vLV  G  ++
      KHJ32646.1  5 YKTVLVVGGEGEK 17
                    6889998887665 PP

  == domain 2  score: 46.1 bits;  conditional E-value: 4.3e-16
                     .STTSSHHHHHHHHHH..........---GGGEEEEES-TTTHHHHHHHCT......-EEEEESSSSS-TTTHHHHHHHHT---SEEES- CS
  Hydrolase_like   2 lgKPepemydfalevl..........gsdpeevlmiGDrlatDiagAnnaG......wksvLVltGvtrpedleepehkptyvaddlaea 75 
                     +gKP+ +++ fa + l          + +pe v+++GD++++Di+g nn+       w s+LV tGv++++   ep +kp + + ++ +a
      KHJ32646.1 155 FGKPQIGTFQFATRLLqqwrkeehhiNRPPETVYFVGDTPESDIKGTNNYNenakndWYSILVNTGVYQEGT--EPTYKPRVNVSTVLDA 242
                     69*******************99999999********************9888888899***********99..4688899988888775 PP

>> Lipase_3  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   4.4e-05      0.39      89     127 ..     142     180 ..     131     187 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 4.4e-05
                 TT-SS---EEEEEES----B-HHHHHHHHT-TTEEEEEE CS
    Lipase_3  89 ngenekkkvtvvtfGqPrvgnkefaklvdsqlnkkvlrv 127
                 ++ ++ k+++ ++fG+P++g  +fa+++ +q +k+ +++
  KHJ32646.1 142 KDLTKGKELETIAFGKPQIGTFQFATRLLQQWRKEEHHI 180
                 5556678999******************99999965554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 1804.05
//
Query:       KHJ32647.1  [L=390]
Description: putative m protein repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0034   17.2   3.0       0.83    9.6   0.6    2.7  2  Shugoshin_N      Shugoshin N-terminal coiled-coil region
     0.0039   17.3   1.8     0.0039   17.3   1.8    3.5  4  ADIP             Afadin- and alpha -actinin-Binding
  ------ inclusion threshold ------
      0.027   14.2   1.4      0.027   14.2   1.4    3.7  4  DivIC            Septum formation initiator
      0.038   15.1   2.5      0.038   15.1   2.5    2.9  2  SOGA             Protein SOGA
      0.054   12.0   0.1      0.095   11.2   0.1    1.3  1  FUSC             Fusaric acid resistance protein family
       0.12   12.3   2.5        3.7    7.5   0.3    2.7  2  WD40_alt         Alternative WD40 repeat motif
       0.15   11.7   5.6      0.076   12.6   0.4    2.5  2  DUF2968          Protein of unknown function (DUF2968)
       0.27   11.6   5.3        1.7    9.0   0.6    3.3  3  TSC22            TSC-22/dip/bun family
       0.44   10.5  10.5        1.5    8.7   0.6    3.3  3  GIT_CC           GIT coiled-coil Rho guanine nucleotide excha
       0.58   10.3   6.0        2.1    8.4   0.7    3.1  3  APC_N_CC         Coiled-coil N-terminus of APC, dimerisation 
       0.74    9.9  11.5       0.91    9.7   2.6    3.0  3  Cep57_CLD_2      Centrosome localisation domain of PPC89
        1.3    9.3  22.1        8.7    6.6   0.4    5.3  5  XhlA             Haemolysin XhlA
        1.7    8.9   8.5       0.23   11.7   0.7    2.9  3  HALZ             Homeobox associated leucine zipper
        4.1    7.9  10.5        3.3    8.2   0.6    3.9  3  Snapin_Pallidin  Snapin/Pallidin
        6.1    7.0  21.9      0.061   13.4   2.0    4.1  5  bZIP_1           bZIP transcription factor


Domain annotation for each model (and alignments):
>> Shugoshin_N  Shugoshin N-terminal coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.6    0.0007      0.83      18      36 ..     192     210 ..     188     213 .. 0.84
   2 !    7.0   0.1    0.0044       5.3      21      34 ..     240     253 ..     234     254 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0007
  Shugoshin_N  18 alslkirelekevseLlsE 36 
                  +l+++i ele+e+  L++E
   KHJ32647.1 192 QLCARIVELEAENQNLRQE 210
                  6899999999999999998 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0044
  Shugoshin_N  21 lkirelekevseLl 34 
                   ki+ele e+seL+
   KHJ32647.1 240 VKIKELEDEISELR 253
                  69***********8 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   2.7      0.11   1.3e+02      81     118 ..       8      45 ..       3      65 .. 0.83
   2 !   17.3   1.8   3.3e-06    0.0039      81     126 ..     174     219 ..     155     224 .. 0.91
   3 ?   -3.1   0.0         6   7.2e+03     131     147 ..     237     253 ..     228     259 .. 0.52
   4 ?   -2.8   0.2       5.1   6.1e+03      68      80 ..     346     355 ..     335     365 .. 0.47

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.11
        ADIP  81 tqleqlerelalvqakerqlekklktleqklknekeel 118
                 ++l++ +r+++++++k+ + +k++  le+ +k+ ++ l
  KHJ32647.1   8 QKLAAAKRRVEQLKKKKGNVKKEIDPLEASVKSSAQNL 45 
                 67889999999999999999999999999999888765 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 3.3e-06
        ADIP  81 tqleqlerelalvqakerqlekklktleqklknekeelqrlknalq 126
                  ql +l+++ a +++k+ ql +++ +le+ ++n+++el+rl + ++
  KHJ32647.1 174 SQLVALDNQKAEAEKKCHQLCARIVELEAENQNLRQELNRLSSCND 219
                 688999**********************************988665 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 6
        ADIP 131 qyahelkkkdreiekLk 147
                  + + +k  + ei++L+
  KHJ32647.1 237 RFLVKIKELEDEISELR 253
                 44444444444444444 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 5.1
        ADIP  68 eierlqskierlk 80 
                 e+   +++ier k
  KHJ32647.1 346 ES---KNRIERIK 355
                 22...33333332 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   2.4     0.016        19      20      50 ..       4      34 ..       1      43 [. 0.84
   2 ?   14.2   1.4   2.3e-05     0.027      21      59 ..     185     225 ..     173     226 .. 0.81
   3 ?   -0.1   0.0      0.65   7.7e+02      40      51 ..     242     253 ..     233     258 .. 0.68
   4 ?   -3.5   0.4         8   9.5e+03      30      43 ..     348     361 ..     342     364 .. 0.45

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.016
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC- CS
       DivIC 20 kqlkqeiaalqaelaklkaeneeLeaevkdL 50
                +++ q++aa ++ +++lk+++ + ++e++ L
  KHJ32647.1  4 QAKAQKLAAAKRRVEQLKKKKGNVKKEIDPL 34
                5678999999999999999999999999877 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 2.3e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XX..XXXXXXX CS
       DivIC  21 qlkqeiaalqaelaklkaeneeLeaevkdLks..dedyiee 59 
                 + +++ ++l a +++l aen++L +e+++L+s  d++++++
  KHJ32647.1 185 EAEKKCHQLCARIVELEAENQNLRQELNRLSScnDQNMVDK 225
                 45667788889999999999999999999977889999876 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.65
                 HHHHHHHHCC-X CS
       DivIC  40 neeLeaevkdLk 51 
                 ++eLe+e+++L+
  KHJ32647.1 242 IKELEDEISELR 253
                 456666666654 PP

  == domain 4  score: -3.5 bits;  conditional E-value: 8
                 HHHHHHHHHHHHHH CS
       DivIC  30 qaelaklkaeneeL 43 
                 ++ ++++k+ +++L
  KHJ32647.1 348 KNRIERIKNIKRNL 361
                 34444444444444 PP

>> SOGA  Protein SOGA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   2.5       3.8   4.5e+03      21      70 ..      15      62 ..       7     108 .. 0.63
   2 ?   15.1   2.5   3.1e-05     0.038      17      83 ..     191     254 ..     178     257 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 3.8
        SOGA 21 rslseleeenkqlteeLnkyksklgeeessleeeeeassdsskeaelkee 70
                r++ +l++++ ++++e+  +    +++ ++l+++   ++  ++e+++ ee
  KHJ32647.1 15 RRVEQLKKKKGNVKKEIDPLEASVKSSAQNLPDSF--ETLLTNETTTTEE 62
                55556666666666666666666666666665522..2222223333333 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 3.1e-05
        SOGA  17 eLlrrslseleeenkqlteeLnkyksklgeeessleeeeeassdsskeaelkeeLklarlqineLsg 83 
                 + l+ +++ele en++l++eLn++ s  +++   +      + +++++a   +++k  + +i+eL +
  KHJ32647.1 191 HQLCARIVELEAENQNLRQELNRLSSCNDQNMVDKGL---DQISQESSARFLVKIKELEDEISELRR 254
                 56999******************98876665544433...444445678888999999999999987 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1     8e-05     0.095     199     294 ..     169     257 ..     152     272 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 8e-05
        FUSC 199 alealrsqaayesprirararalrrllsrmlallallsslarllarlraeeaaavpelaallaelaaleaaaaaealeaalaalrarlralrrale 294
                 ++e  ++ +a+++++ +++ ++ ++l +r+++l a  + l+++l+rl++ +++ +  +++ l+++ +    +++++   ++++l++++ +lrr  +
  KHJ32647.1 169 QIEYRSQLVALDNQK-AEAEKKCHQLCARIVELEAENQNLRQELNRLSSCNDQNM--VDKGLDQISQ----ESSARFLVKIKELEDEISELRRGFH 257
                 566666777778888.9999********************************997..99********....7899****************99876 PP

>> WD40_alt  Alternative WD40 repeat motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1     0.047        57      15      31 ..     192     208 ..     189     213 .. 0.87
   2 ?    7.5   0.3    0.0031       3.7      18      31 ..     240     253 ..     232     254 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.047
    WD40_alt  15 qlkvrvseLeeEVrtLr 31 
                 ql  r+ eLe E ++Lr
  KHJ32647.1 192 QLCARIVELEAENQNLR 208
                 7889************9 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0031
    WD40_alt  18 vrvseLeeEVrtLr 31 
                 v++ eLe+E++ Lr
  KHJ32647.1 240 VKIKELEDEISELR 253
                 99***********9 PP

>> DUF2968  Protein of unknown function (DUF2968)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.6      0.32   3.8e+02     140     170 ..       7      37 ..       2      48 .. 0.55
   2 ?   12.6   0.4   6.4e-05     0.076     135     179 ..     161     205 ..     115     206 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.32
     DUF2968 140 aerQkqarkeaaaLeaqreaaqaqlralqrq 170
                 a++ ++a++ +++L++++ +++++++ l+  
  KHJ32647.1   7 AQKLAAAKRRVEQLKKKKGNVKKEIDPLEAS 37 
                 3334445555555555555555555555554 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 6.4e-05
     DUF2968 135 QeqavaerQkqarkeaaaLeaqreaaqaqlralqrqirqLqaqqe 179
                     v++ Q + r++  aL++q+++a+++ ++l  +i +L+a+++
  KHJ32647.1 161 EGIDVTNLQIEYRSQLVALDNQKAEAEKKCHQLCARIVELEAENQ 205
                 55679999*********************************9976 PP

>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1       1.8   2.1e+03      13      30 ..      14      31 ..       9      44 .. 0.67
   2 ?    9.0   0.6    0.0014       1.7      24      45 ..     191     212 ..     186     225 .. 0.77
   3 ?    2.7   0.0      0.13   1.5e+02      22      35 ..     241     254 ..     239     257 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 1.8
       TSC22 13 rEeVevLkekIkeLeern 30
                +  Ve+Lk+k  +  +++
  KHJ32647.1 14 KRRVEQLKKKKGNVKKEI 31
                556888887755555554 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0014
       TSC22  24 keLeernseleeENslLkalas 45 
                   L +r+ ele EN+ L++ ++
  KHJ32647.1 191 HQLCARIVELEAENQNLRQELN 212
                 5678888888888888887665 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.13
       TSC22  22 kIkeLeernselee 35 
                 kIkeLe+++sel++
  KHJ32647.1 241 KIKELEDEISELRR 254
                 79********9975 PP

>> GIT_CC  GIT coiled-coil Rho guanine nucleotide exchange factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.6    0.0013       1.5      23      54 ..       8      39 ..       6      45 .. 0.89
   2 ?   -2.5   0.0       4.1   4.9e+03      19      43 ..      88     114 ..      85     116 .. 0.56
   3 ?    6.4   1.3    0.0066       7.9      28      49 ..     193     214 ..     174     225 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0013
      GIT_CC 23 kalaaseakiqqLlkvNtslsdelrlLQskvq 54
                ++laa+ ++++qL+k + + ++e+  L  +v+
  KHJ32647.1  8 QKLAAAKRRVEQLKKKKGNVKKEIDPLEASVK 39
                589*********************99988776 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 4.1
      GIT_CC  19 lelKkalaaseak..iqqLlkvNtsls 43 
                 +elK+++  s  +  ++ +  vN ++s
  KHJ32647.1  88 IELKSNSPSSQNQstLELMSPVNHKIS 114
                 788887766654410333445666665 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0066
      GIT_CC  28 seakiqqLlkvNtslsdelrlL 49 
                   a+i +L + N++l +el++L
  KHJ32647.1 193 LCARIVELEAENQNLRQELNRL 214
                 4478888888888888888888 PP

>> APC_N_CC  Coiled-coil N-terminus of APC, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1      0.08        95       8      24 ..      15      31 ..      13      33 .. 0.91
   2 ?    8.4   0.7    0.0018       2.1       5      29 ..     192     216 ..     189     217 .. 0.82
   3 ?   -2.4   0.0       4.4   5.2e+03      22      31 ..     243     252 ..     241     255 .. 0.58

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.08
    APC_N_CC  8 rQvEaLkkenthlrrEL 24
                r vE Lkk   + ++E+
  KHJ32647.1 15 RRVEQLKKKKGNVKKEI 31
                78*************97 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0018
    APC_N_CC   5 QLvrQvEaLkkenthlrrELedNSs 29 
                 QL   +  L +en +lr+EL+  Ss
  KHJ32647.1 192 QLCARIVELEAENQNLRQELNRLSS 216
                 777777779***********87665 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 4.4
    APC_N_CC  22 rELedNSshL 31 
                 +ELed  s L
  KHJ32647.1 243 KELEDEISEL 252
                 5666655555 PP

>> Cep57_CLD_2  Centrosome localisation domain of PPC89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.4     0.023        28      37      63 ..       7      33 ..       5      41 .. 0.87
   2 ?    9.7   2.6   0.00076      0.91      33      62 ..     183     212 ..     170     220 .. 0.82
   3 ?   -2.0   0.0       3.4     4e+03      48      57 ..     243     252 ..     227     256 .. 0.56

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.023
  Cep57_CLD_2 37 lrqLgvAyeelneLkaevealrkELke 63
                 +++L  A +++++Lk +    +kE + 
   KHJ32647.1  7 AQKLAAAKRRVEQLKKKKGNVKKEIDP 33
                 689*********************654 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00076
  Cep57_CLD_2  33 RdsalrqLgvAyeelneLkaevealrkELk 62 
                    +a+++ ++ + ++ eL ae+  lr+EL 
   KHJ32647.1 183 KAEAEKKCHQLCARIVELEAENQNLRQELN 212
                  557899999*******************75 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 3.4
  Cep57_CLD_2  48 neLkaeveal 57 
                   eL +e   l
   KHJ32647.1 243 KELEDEISEL 252
                  3333333333 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.4       0.3   3.6e+02      18      40 ..      15      37 ..       5      45 .. 0.49
   2 ?    1.3   1.5      0.33   3.9e+02      10      46 ..      39      76 ..      26      79 .. 0.74
   3 ?    6.6   0.4    0.0072       8.7      18      48 ..     174     204 ..     169     207 .. 0.87
   4 ?    6.6   0.2    0.0072       8.7      10      45 ..     224     253 ..     208     255 .. 0.84
   5 ?    5.7   0.3     0.014        17      31      49 ..     344     362 ..     330     367 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.3
        XhlA 18 ervdkleekaaeaeekiknleed 40
                 rv++l++k+ +++++i+ le  
  KHJ32647.1 15 RRVEQLKKKKGNVKKEIDPLEAS 37
                24444444444444444444433 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.33
        XhlA 10 etkldnleervdkleekaaeaeekiknleed.lkkles 46
                ++   nl +  ++l  +++++ e++kn eed +++ +s
  KHJ32647.1 39 KSSAQNLPDSFETLLTNETTTTEEAKNYEEDkINEVTS 76
                44455666788899999999*******98753777766 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0072
        XhlA  18 ervdkleekaaeaeekiknleedlkklesnq 48 
                 +++  l++ +aeae+k  +l+ ++ +le+ +
  KHJ32647.1 174 SQLVALDNQKAEAEKKCHQLCARIVELEAEN 204
                 5678899********************9865 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.0072
        XhlA  10 etkldnleervdkleekaaeaeekiknleedlkkle 45 
                 ++ ld +++      e +a+++ kik+le+++++l 
  KHJ32647.1 224 DKGLDQISQ------ESSARFLVKIKELEDEISELR 253
                 455666666......799***************996 PP

  == domain 5  score: 5.7 bits;  conditional E-value: 0.014
        XhlA  31 eekiknleedlkklesnqk 49 
                 ee++kn  e++k+++ n+k
  KHJ32647.1 344 EEESKNRIERIKNIKRNLK 362
                 789**************98 PP

>> HALZ  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.1      0.32   3.9e+02      19      40 ..      15      36 ..      12      40 .. 0.68
   2 ?   11.7   0.7   0.00019      0.23      13      40 ..     189     216 ..     187     218 .. 0.86
   3 ?   -3.2   0.1         9   1.1e+04      30      39 ..     244     253 ..     243     254 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.32
        HALZ 19 sdydsLkkenekLkaelqeLke 40
                 ++++Lkk + + k+e+  L +
  KHJ32647.1 15 RRVEQLKKKKGNVKKEIDPLEA 36
                4667777777777777776655 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00019
        HALZ  13 sYdaLksdydsLkkenekLkaelqeLke 40 
                 ++ +L ++   L++en++L++el++L++
  KHJ32647.1 189 KCHQLCARIVELEAENQNLRQELNRLSS 216
                 57778888889**************975 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 9
        HALZ  30 kLkaelqeLk 39 
                 +L+ e+ eL+
  KHJ32647.1 244 ELEDEISELR 253
                 6888999887 PP

>> Snapin_Pallidin  Snapin/Pallidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.6    0.0028       3.3      61      89 ..       6      34 ..       2      35 .. 0.89
   2 ?    1.5   2.1      0.34   4.1e+02      14      44 ..     189     219 ..     172     254 .. 0.71
   3 ?    0.1   0.0      0.92   1.1e+03      67      83 ..     346     362 ..     318     364 .. 0.64

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0028
  Snapin_Pallidin 61 yakKLvnikkrmsslnerlqklkkRaekL 89
                      a+KL+++k+r+++l+++  ++kk ++ L
       KHJ32647.1  6 KAQKLAAAKRRVEQLKKKKGNVKKEIDPL 34
                     689********************998766 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.34
  Snapin_Pallidin  14 kldeldeklkelrqsQeeLleqldrlnekLk 44 
                      k ++l +++ el+++ + L+++l+rl++  +
       KHJ32647.1 189 KCHQLCARIVELEAENQNLRQELNRLSSCND 219
                      4556667777777777777777777766544 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.92
  Snapin_Pallidin  67 nikkrmsslnerlqklk 83 
                      + k+r+++++++ ++lk
       KHJ32647.1 346 ESKNRIERIKNIKRNLK 362
                      34555555555555544 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   1.0      0.01        13      31      57 ..      13      39 ..       4      46 .. 0.79
   2 ?   -1.7   0.0       2.6   3.1e+03      27      54 ..      41      68 ..      38      70 .. 0.75
   3 ?   13.4   2.0   5.1e-05     0.061      26      54 ..     188     216 ..     185     222 .. 0.90
   4 ?    0.2   0.0      0.67     8e+02      48      60 ..     241     253 ..     232     257 .. 0.70
   5 ?   -2.6   0.9       5.1     6e+03      26      37 ..     345     356 ..     338     363 .. 0.44

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.01
                HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1 31 LerrvkaLekeNksLkseleelkkeve 57
                 +rrv++L+k+  + k+e++ l+  v+
  KHJ32647.1 13 AKRRVEQLKKKKGNVKKEIDPLEASVK 39
                4689*******9999***999998776 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 2.6
                HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1 27 eieeLerrvkaLekeNksLkseleelkk 54
                + ++L + +++L +  ++  +e++++++
  KHJ32647.1 41 SAQNLPDSFETLLTNETTTTEEAKNYEE 68
                5667888888888888888888888876 PP

  == domain 3  score: 13.4 bits;  conditional E-value: 5.1e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  26 aeieeLerrvkaLekeNksLkseleelkk 54 
                 +++ +L  r  +Le+eN++L++el++l+ 
  KHJ32647.1 188 KKCHQLCARIVELEAENQNLRQELNRLSS 216
                 789***********************986 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.67
                 HHHHHHHHHHHHH CS
      bZIP_1  48 eleelkkevekLk 60 
                 +++el++e+++L+
  KHJ32647.1 241 KIKELEDEISELR 253
                 5666666666665 PP

  == domain 5  score: -2.6 bits;  conditional E-value: 5.1
                 HHHHHHHHHHHH CS
      bZIP_1  26 aeieeLerrvka 37 
                 +e ++  +r k 
  KHJ32647.1 345 EESKNRIERIKN 356
                 444333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2131  (0.118858); expected 358.6 (0.02)
Passed bias filter:                      638  (0.0355848); expected 358.6 (0.02)
Passed Vit filter:                        82  (0.0045736); expected 17.9 (0.001)
Passed Fwd filter:                        34  (0.00189637); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.71u 0.31s 00:00:01.02 Elapsed: 00:00:00.47
# Mc/sec: 2475.38
//
Query:       KHJ32648.1  [L=185]
Description: putative phosphatidyl synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-16   60.4   0.0    6.4e-16   58.3   0.0    1.9  2  Hydrolase_6  Haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> Hydrolase_6  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0     0.072   1.3e+03      54      68 ..      66      80 ..      23      90 .. 0.68
   2 !   58.3   0.0   3.5e-20   6.4e-16       1      66 [.     103     174 ..     103     183 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.072
                 TT----GGGEEEHHH CS
  Hydrolase_6 54 lgvditeeqvvtsat 68
                  +++i+ee+ ++s +
   KHJ32648.1 66 SNLNIEEEDSISSTS 80
                 244555666665555 PP

  == domain 2  score: 58.3 bits;  conditional E-value: 3.5e-20
                  EEEESTTTSEETTEE-TTHHHHHHHHHHTT.....-EEEEEE---SS-HHHHHHHH.HHTT----GGGEEEH CS
  Hydrolase_6   1 flfDidGvLwrgdkaipgaaealnalraag.....kpvvllTNnsskseeeyakkl.eklgvditeeqvvts 66 
                  f+fDidGvL+rg+++ip+a ea+++l+ ++     +p+++lTN+++k+e+e++ +l ++l+++++++q+++ 
   KHJ32648.1 103 FAFDIDGVLIRGGRPIPEAIEAMRVLNGENkygikVPYIFLTNGGGKTESERCIDLsRQLDIEVSPSQFICG 174
                  78***************************999**9*********************999**********996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1417.07
//
Query:       KHJ32649.1  [L=685]
Description: putative transketolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   3.1e-151  503.0   0.0   3.9e-151  502.7   0.0    1.1  1  Transketolase_N  Transketolase, thiamine diphosphate binding 
    2.5e-45  154.3   0.0    3.8e-45  153.7   0.0    1.2  1  Transket_pyr     Transketolase, pyrimidine binding domain
      4e-10   39.6   0.0    8.5e-10   38.6   0.0    1.6  1  Transketolase_C  Transketolase, C-terminal domain
    0.00018   20.8   0.0     0.0004   19.7   0.0    1.4  1  DXP_synthase_N   1-deoxy-D-xylulose-5-phosphate synthase
     0.0016   17.5   0.0     0.0023   16.9   0.0    1.2  1  E1_dh            Dehydrogenase E1 component


Domain annotation for each model (and alignments):
>> Transketolase_N  Transketolase, thiamine diphosphate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  502.7   0.0  1.1e-154  3.9e-151       2     334 .]       7     339 ..       6     339 .. 0.99

  Alignments for each domain:
  == domain 1  score: 502.7 bits;  conditional E-value: 1.1e-154
                      HHHHHHHHHHHHHHHHHHHT-S--HHHHHHHHHHHHHHHHT--B-TTBTT-TTS-EEEESSGGGHHHHHHHHHHTTSS--HHHHTTTTSTT-SS CS
  Transketolase_N   2 dkkavnaiRvLavDavekaksGhPGaplgladiaevlfkkllkhnPndpkwidRDRfvLsnGhaslllYsllhLtGydlsledlksfrqlgskt 95 
                      d++a+n+iR+LavDa  k +sGhPGap+g+a++a+vlf+k++++nP++ kwi+RDRfvLsnGh+++l+Y+llhL Gy ls+ed+k fr++gs t
       KHJ32649.1   7 DTQAINTIRLLAVDATFKCNSGHPGAPMGMAPVAHVLFNKIMNYNPKNSKWINRDRFVLSNGHGCMLQYALLHLAGYKLSMEDIKAFRTVGSLT 100
                      6799****************************************************************************************** PP

                      -SS--TTTSTT--S---STTHHHHHHHHHHHHHHHHHHHH-BTTB-S----EEEEEEHHHHHSHHHHHHHHHHHHTT-TTEEEEEEESSEETTE CS
  Transketolase_N  96 pGhPelghtagvevttGPLGqGianavglalaektlaatynkpgfdivdhytyvilgDgclmeGvsseasslagtlkLgkLivlyDdnkisidG 189
                      pGhPe ++t+gvevttGPLGqG a+avgla+a+++la  ynkpgf+i+d+yty++lgDgc+meG++sea+slag+lkLg++i++yDdn isidG
       KHJ32649.1 101 PGHPESHETDGVEVTTGPLGQGFASAVGLAIAQQHLAGVYNKPGFNIFDNYTYIFLGDGCMMEGIASEAASLAGHLKLGNIIAIYDDNGISIDG 194
                      ********************************************************************************************** PP

                      EGGGT--S-HHHHHHHTT-EEEEE.TTTT-HHHHHHHHHHHHH-TTS-EEEEEE--TTTTSTTTTTSGGGTSS---HHHHHHHHHHTTS-TT-T CS
  Transketolase_N 190 eteisftedvakrfeaygWhviev.edgedveaikaaieeakaekdkPsliklrtviGygspakagtedvhGapLgedevaalkkklGfdpeks 282
                      +++ +ftedv+krfeaygWh+i+v ++++d+e ++aai++ +++kdkPsliklrt+iG+gs + +gt  vhG +L+e++++++k k+Gf+pe+s
       KHJ32649.1 195 DVKCAFTEDVNKRFEAYGWHTITVgDGDNDLEGMEAAIKACQEVKDKPSLIKLRTTIGFGS-LLQGTPGVHGNALKENDIKQIKVKFGFNPEES 287
                      ************************89999********************************.******************************** PP

                      S---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTT--- CS
  Transketolase_N 283 fevpeevydaykekvaegakaeeeWeekfaaykkkapeeaaelerrlsgelP 334
                      f+vp+ vyd y+ ++aega++e+eW+++f++y++ +  ea e++rr++g+lP
       KHJ32649.1 288 FVVPQAVYDLYNCRAAEGASKEKEWNQLFEKYSQSFKTEAIEIKRRANGDLP 339
                      **************************************************99 PP

>> Transket_pyr  Transketolase, pyrimidine binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.7   0.0   1.1e-48   3.8e-45       2     176 ..     355     531 ..     354     532 .. 0.95

  Alignments for each domain:
  == domain 1  score: 153.7 bits;  conditional E-value: 1.1e-48
                   EEEHHHHHHHHHHHHHCTTTTEEEEESSTHHHHTTCHCCHHEGGT........TEGEEE--S-HHHHHHHHHHHHHHCTTEEEEEEEEHHHHGGGHH CS
  Transket_pyr   2 kiawrkaeaealaellkedpevvligaDvaggtfsvrkgllhdqg........egrvidsgisEqavlgfavGaalagpllviveaqFgdFangAqi 90 
                   ++a+rk ++ +l+++ k+ pe+++++aD++g++++ +k+ +++q+         gr+i++g++E+a+ ++++G+a  g l ++++++F++F++    
    KHJ32649.1 355 AVATRKLSEIVLQSIYKTIPELIGGSADLTGSNLTRWKDAVDFQPpssgigdwTGRYIRYGVREHAMGAIMNGLASYG-LIIPFGGTFLNFVS---- 446
                   589***************************************************************************.9*************.... PP

                   GGHHHHHCHHHHHT--EE.EEESBSGGGSTTGTTTSBSSHHHHHHTSTTEEEE--SSHHHHHHHHHHHHHSSS.SEEEEEE-SSEEC CS
  Transket_pyr  91 yadqairsgeakgklkvg.vvtrlpigvgedGpehqsaeleaflrlipglkvvrPsdpaetkhllrrairredrkPvvlrlpksllr 176
                   ya  a+r   a+++++ + v t+++ig+gedGp+hq++e + ++r++p++ v+rP+d +et ++++ ai++ +++P++l+l++++l+
    KHJ32649.1 447 YAAGAVR-IGALSHIRNIwVATHDSIGLGEDGPTHQPIEVLPHFRALPNCMVWRPADGNETSAAYYVAITS-KNTPSILALSRQNLP 531
                   *******.56666666666***************************************************5.58***********98 PP

>> Transketolase_C  Transketolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.6   0.0   2.4e-13   8.5e-10       2     124 .]     546     656 ..     545     656 .. 0.80

  Alignments for each domain:
  == domain 1  score: 38.6 bits;  conditional E-value: 2.4e-13
                      EEEEEETTSSEEEEEETTHHHHHHHHHHHHHTT.TTCEEEEE-SEEESHHHHHHHHHHHHHSEEEEEEEEESTTSHHHHHHHHHHHCCCTTCSS CS
  Transketolase_C   2 kaeilregkdvtlvayGsmveealeAaeeLeke.gisaeVvdlrtvkplDketilesvkktgrlvvveeavkrgGigsevaaalaeeafdglda 94 
                      ++  + +  dvtlv++Gs+v+ +++A++ L+++ +i+a+Vv++++++ +D +  +       rl v+ ++ ++ +++   +  + +  + + + 
       KHJ32649.1 546 YTIFEDQRADVTLVSTGSEVSICIDAVKYLNDNhCIKARVVSMPCFEVFDSQPYD------YRLSVLPDGIPILSVEPSSTLGWER--YSHEQF 631
                      555667899**********************999********************9......9999999999999997766666666..333333 PP

                      EEEEEEE-SSSSSSGHHHHHHHTT-SHHHH CS
  Transketolase_C  95 pvkrvggpdviepgsaeelekafgldaeki 124
                         r+     + +g++++++k f ++++ i
       KHJ32649.1 632 GLNRF-----GASGAYKDIYKKFEFTPQGI 656
                      33333.....66677788888888887765 PP

>> DXP_synthase_N  1-deoxy-D-xylulose-5-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   1.1e-07    0.0004      61     179 ..      60     196 ..      23     239 .. 0.80

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 1.1e-07
  DXP_synthase_N  61 kDklvwDvgHqa...YvhKiltgRkdkfktl...rqkgGls.gfpkrsEseyDafeagHsstsisaalGlavardlkge..........kkkvva 138
                     +D++v   gH +   Y+   l+g k +++++   r+ g l+ g+p+ +E +   +++g  +   + a+Gla+a+++             ++ +  
      KHJ32649.1  60 RDRFVLSNGHGCmlqYALLHLAGYKLSMEDIkafRTVGSLTpGHPESHETDGVEVTTGPLGQGFASAVGLAIAQQHLAGvynkpgfnifDNYTYI 154
                     5666777777654335555567777655554111566666558999999999999999999************8765444667777777577777 PP

  DXP_synthase_N 139 viGDgaltgGmafealnnigelk.kkllvilNdNemsisknv 179
                      +GDg +  G+a ea   +g+lk  +++ i+ dN  si+  v
      KHJ32649.1 155 FLGDGCMMEGIASEAASLAGHLKlGNIIAIYDDNGISIDGDV 196
                     89*******************98359999*********9877 PP

>> E1_dh  Dehydrogenase E1 component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   6.5e-07    0.0023      98     222 ..     114     247 ..      83     250 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 6.5e-07
                 EE-SSTTTHHHHHHHHHHHHH..........HHTS---EEEEEEGGGTT-HHHHHHHHHHHHTT--E.EEEEEEESEETTEEHHHH-S---GGG..TTT CS
       E1_dh  98 ggngivgaqvplvaGialaak..........iegkkevailliGDgAanqGdvyealnlaalwklpv.ifvveNNkygisTeaekasaskeladrargv 185
                  + g++g     + G+a+a++          ++  ++ + ++ GDg   +G++ ea+ la   kl   i +   N++ i  +++ a  ++++ +r  ++
  KHJ32649.1 114 VTTGPLGQGFASAVGLAIAQQhlagvynkpgFNIFDNYTYIFLGDGCMMEGIASEAASLAGHLKLGNiIAIYDDNGISIDGDVKCA-FTEDVNKRFEAY 211
                 4566777776666699999999999999999999999***********************99999763778889999999888665.57889999**** PP

                 TS-EEEE.ET.TSHHHHHHHHHHHHHHHHTTT--EEEEE CS
       E1_dh 186 gipglrV.dg.nDplavyeAvkfAaeraregkgplliel 222
                 g   ++V dg nD + + +A k+ +e     ++p+li l
  KHJ32649.1 212 GWHTITVgDGdNDLEGMEAAIKACQEVK---DKPSLIKL 247
                 *******877458888888888777654...35777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (685 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       346  (0.0192983); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 4963.96
//
Query:       KHJ32650.1  [L=292]
Description: putative c2h2 transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-08   34.8  10.2      0.017   15.5   0.9    3.7  3  zf-C2H2        Zinc finger, C2H2 type
    0.00016   21.8   0.1    0.00092   19.4   0.0    2.1  2  zf-C2H2_aberr  Aberrant zinc-finger
     0.0019   18.9   9.0        2.3    9.3   0.7    4.0  3  zf-C2H2_4      C2H2-type zinc finger
  ------ inclusion threshold ------
      0.039   14.0   2.1      0.065   13.3   2.1    1.3  1  DUF5094        Domain of unknown function (DUF5094)
      0.051   14.0   1.3      0.051   14.0   1.3    2.4  3  ZapB           Cell division protein ZapB
       0.37   11.3   2.5       0.52   10.8   1.4    1.8  2  DUF3391        Domain of unknown function (DUF3391)
       0.87   10.3  15.5        1.4    9.6   3.5    3.9  4  FOXP-CC        FOXP coiled-coil domain


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.8   0.00012       0.3       1      23 []     110     137 ..     110     137 .. 0.96
   2 !   12.2   0.0   7.9e-05       0.2       1      23 []     141     168 ..     141     168 .. 0.97
   3 !   15.5   0.9   6.8e-06     0.017       3      23 .]     180     207 ..     178     207 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00012
                 EEET..TTT...EEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCp..dCg...ksFkrksnLkrHirtH 23 
                 ++C   +C+   ++F+rk +  +H+ +H
  KHJ32650.1 110 FVCRwpGCTedvRVFNRKCEWSKHMDKH 137
                 899999*******************999 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 7.9e-05
                 EEET..TTT..EEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCg..ksFkrksnLkrHirt.H 23 
                 ykCp  +C     F+ +  L rH+r  H
  KHJ32650.1 141 YKCPaeGCEklPGFTYSGGLLRHQREvH 168
                 9************************999 PP

  == domain 3  score: 15.5 bits;  conditional E-value: 6.8e-06
                 ET..TTT....EEESSHHHHHHHHHC.C CS
     zf-C2H2   3 Cp..dCg....ksFkrksnLkrHirt.H 23 
                 Cp   C+    k F+r++nL+ H+r+ H
  KHJ32650.1 180 CPhpNCKrfsgKGFSRQENLNEHLRRvH 207
                 77778888888***************99 PP

>> zf-C2H2_aberr  Aberrant zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       0.4     1e+03     140     152 ..     109     121 ..      99     138 .. 0.67
   2 !   19.4   0.0   3.6e-07   0.00092       1      73 [.     141     214 ..     141     281 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.4
  zf-C2H2_aberr 140 liyCripGCgkrf 152
                     + Cr pGC    
     KHJ32650.1 109 KFVCRWPGCTEDV 121
                    4789999997543 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 3.6e-07
  zf-C2H2_aberr   1 ykClykaCdlk..yssvlglrrhlveykhslytnsefslkCpvrkCses.ivelentelleehlekehaakllell 73 
                    ykC+ + C+    +  + gl rh +e  h+l+    ++l Cp  +C+      ++ +e+l+ehl++ h+    + l
     KHJ32650.1 141 YKCPAEGCEKLpgFTYSGGLLRHQREV-HNLHGGPRKQLNCPHPNCKRFsGKGFSRQENLNEHLRRVHTD-TNNEL 214
                    9*******8652356667999**8875.99****************7642467***************93.33333 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.5     0.003       7.7       7      23 ..     121     137 ..     110     138 .. 0.79
   2 ?    5.2   0.0     0.018        47       2      24 .]     142     168 ..     141     168 .. 0.75
   3 !    9.3   0.7   0.00088       2.3       3      24 .]     180     207 ..     178     207 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.003
   zf-C2H2_4   7 gksFsskkaLlrHlkth 23 
                  ++F++k+++++H+ +h
  KHJ32650.1 121 VRVFNRKCEWSKHMDKH 137
                 589************99 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.018
   zf-C2H2_4   2 kCpi..C..gksFsskkaLlrHlkthH 24 
                 kCp   C     F+ + +LlrH + +H
  KHJ32650.1 142 KCPAegCekLPGFTYSGGLLRHQREVH 168
                 566665666667988888******999 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00088
   zf-C2H2_4   3 Cpi..C....gksFsskkaLlrHlkthH 24 
                 Cp+  C    gk Fs++++L+ Hl+++H
  KHJ32650.1 180 CPHpnCkrfsGKGFSRQENLNEHLRRVH 207
                 888888888899**99999********9 PP

>> DUF5094  Domain of unknown function (DUF5094)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   2.1   2.6e-05     0.065      31     100 ..     196     275 ..     168     289 .. 0.56

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.6e-05
     DUF5094  31 ke.......nvkvkeaeekke.ekvtstkenkenekqdkd.........sllkeikdienelieaykeeNeyLrslknevlltskll 100
                 +e        v+ + ++e ++ e++++   + +      +         s +   +di++el e +++eNe Lr  +++   +++ll
  KHJ32650.1 196 QEnlnehlrRVHTDTNNELHHgEETEDDGAERA------GtkrkrttqaSTIDTGEDIRQEL-ERLRQENEELRRTSSNMMRQMELL 275
                 222322222222222222211012222222222......12222235557788899*****6.9**********9888888887776 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.69   1.8e+03      14      26 ..      69      81 ..      68      83 .. 0.84
   2 ?   -2.5   0.1       2.9   7.5e+03      60      64 ..     201     205 ..     194     231 .. 0.56
   3 ?   14.0   1.3     2e-05     0.051      15      51 ..     239     275 ..     235     282 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.69
        ZapB 14 qkaidtitlLqme 26
                +++id i++Lq +
  KHJ32650.1 69 SALIDGIAELQPK 81
                689*******965 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.9
        ZapB  60 erlkk 64 
                 e+l+ 
  KHJ32650.1 201 EHLRR 205
                 33322 PP

  == domain 3  score: 14.0 bits;  conditional E-value: 2e-05
        ZapB  15 kaidtitlLqmeieeLkeeneelkeenreleeeneql 51 
                 ++idt +  ++e+e+L++eneel +   ++ ++ e l
  KHJ32650.1 239 STIDTGEDIRQELERLRQENEELRRTSSNMMRQMELL 275
                 78*********************99887777666655 PP

>> DUF3391  Domain of unknown function (DUF3391)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.7   9.6e+03      82      89 ..      88      95 ..      66     124 .. 0.56
   2 ?   10.8   1.4    0.0002      0.52      46     127 ..     202     274 ..     197     281 .. 0.60

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.7
     DUF3391 82 esaeleee 89
                ++++++  
  KHJ32650.1 88 SPSRSKPI 95
                22222222 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.0002
     DUF3391  46 sgiqeVwidtdksdeeelagldvpaaeaaeeakaaeesaeleeekqerperleaereeleraeklyeeakqlvrslfsdvrl 127
                 + ++ V +dt  +  + ++++d  a+ a         +++++ ++ ++++  e  r+eler ++  ee +++  +++++++l
  KHJ32650.1 202 H-LRRVHTDTNNELHHGEETEDDGAERAG--------TKRKRTTQASTIDTGEDIRQELERLRQENEELRRTSSNMMRQMEL 274
                 4.778888888855555555544444332........333333334445555555568888888888888888888888765 PP

>> FOXP-CC  FOXP coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   3.5   0.00054       1.4       6      29 ..     111     137 ..     108     146 .. 0.70
   2 ?    0.6   0.0      0.34   8.7e+02      11      35 ..     147     173 ..     141     179 .. 0.76
   3 ?    5.3   0.2     0.012        31       6      34 ..     179     211 ..     176     219 .. 0.81
   4 ?    0.6   0.2      0.35   9.1e+02      19      50 ..     247     278 ..     239     288 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00054
     FOXP-CC   6 vCkWPgC...ekvledveeflkhlnse 29 
                 vC+WPgC    +v++   e  kh++++
  KHJ32650.1 111 VCRWPGCtedVRVFNRKCEWSKHMDKH 137
                 8******43334667777778887664 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.34
     FOXP-CC  11 gCekv..ledveeflkhlnseHalddk 35 
                 gCek+  ++ ++ +l+h ++ H+l   
  KHJ32650.1 147 GCEKLpgFTYSGGLLRHQREVHNLHGG 173
                 7877655788899*********99765 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.012
     FOXP-CC   6 vCkWPgC....ekvledveeflkhlnseHaldd 34 
                  C  P+C     k ++ +e++ +hl++ H+ ++
  KHJ32650.1 179 NCPHPNCkrfsGKGFSRQENLNEHLRRVHTDTN 211
                 5999***55555678999***********8765 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.35
     FOXP-CC  19 veeflkhlnseHalddkstaqlrvqmqvvqql 50 
                 + + l++l++e +   ++   +  qm+++q++
  KHJ32650.1 247 IRQELERLRQENEELRRTSSNMMRQMELLQNI 278
                 55556777888888888888888888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1244  (0.0693848); expected 358.6 (0.02)
Passed bias filter:                      669  (0.0373138); expected 358.6 (0.02)
Passed Vit filter:                        98  (0.005466); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 2092.96
//
Query:       KHJ32651.1  [L=1947]
Description: putative negative regulator of mitosis negative regulator of mitosis [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-31  109.2   0.4    5.1e-31  107.9   0.4    1.7  1  ANAPC1    Anaphase-promoting complex subunit 1


Domain annotation for each model (and alignments):
>> ANAPC1  Anaphase-promoting complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.9   0.4   2.9e-35   5.1e-31       1     129 [.     114     243 ..     114     244 .. 0.89

  Alignments for each domain:
  == domain 1  score: 107.9 bits;  conditional E-value: 2.9e-35
      ANAPC1   1 aLvVllkdqahiyflsGeshtvpLpFevasvfplpkGlllqRkpeedqapprslrnpsappnsfldsssplltsssqtssqkttfstesrgspkrlslt 99 
                 a+vV+lk+qah+yfl G+sh+++LpFev+s+f++p+G+++qRk+e  ++++  l+ p+ p+nsf++s ++   ++s + s++++fs ++ g++++ s  
  KHJ32651.1 114 AIVVFLKTQAHVYFLFGTSHVIHLPFEVESAFAAPNGVIMQRKLE-VHIVNPVLKTPQTPQNSFVSSLQQ---PWSSKGSRQSSFSISDVGESRQIS-- 206
                 79******************************************7.668999*************88777...67999999999*999999999988.. PP

      ANAPC1 100 lsstles.......kkdsslPslfsLtdPlsevglvv 129
                 ++++++        + d+++P+lfs++dP+se+gl+v
  KHJ32651.1 207 FPPATKIfsepwitNLDTNWPRLFSISDPFSEIGLIV 243
                 4444333678999888888***************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1947 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.97u 0.27s 00:00:01.24 Elapsed: 00:00:00.46
# Mc/sec: 12696.71
//
Query:       KHJ32652.1  [L=106]
Description: putative lea domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.16   12.6  12.8          2    9.0  12.8    2.2  1  YtxH           YtxH-like protein
       0.36   11.2  15.1       0.13   12.7   8.1    2.2  2  Ribosomal_L12  Ribosomal protein L7/L12 C-terminal domain
        7.2    6.6  10.0         26    4.8   0.1    2.5  2  ApoC-I         Apolipoprotein C-I (ApoC-1)


Domain annotation for each model (and alignments):
>> YtxH  YtxH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0  12.8   0.00033         2      24      73 ..      45     105 ..       5     106 .] 0.80

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00033
        YtxH  24 ketRkdlkekaddlkekakelleeakeka...........kekaedlkekvkekadelkek 73 
                 ket + +++k  d  +  ++++ +ake +           +ekaedlk+++k+k +e+k+k
  KHJ32652.1  45 KETDQAIADKIVDGINASQSIAGKAKEITglsgkeakgkvEEKAEDLKDEAKNKKEEIKKK 105
                 5666666666555555565665555555588888888888999999999999999999987 PP

>> Ribosomal_L12  Ribosomal protein L7/L12 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.6      0.02   1.2e+02      31      53 ..      34      55 ..      32      65 .. 0.75
   2 ?   12.7   8.1   2.1e-05      0.13      20      57 ..      70     106 .]      64     106 .] 0.90

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.02
                   HHHHTTTTSTEEEEE-HHHHHHH CS
  Ribosomal_L12 31 KdlVeaapkvvkegvskeeAeei 53
                   K ++e++ k+vke  +++ A++i
     KHJ32652.1 34 KTVIESVKKQVKE-TDQAIADKI 55
                   7889999999998.455666665 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 2.1e-05
                    HHHH---HHHHHHHHTTTTSTEEEEE-HHHHHHHHHHH CS
  Ribosomal_L12  20 reitglgLkeaKdlVeaapkvvkegvskeeAeeikkkL 57 
                    +eitgl+ keaK  Ve+  +++k++++ ++ eeikkkL
     KHJ32652.1  70 KEITGLSGKEAKGKVEEKAEDLKDEAK-NKKEEIKKKL 106
                    9**********************9875.56699***98 PP

>> ApoC-I  Apolipoprotein C-I (ApoC-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1    0.0044        26       8      26 ..      37      55 ..      33      66 .. 0.80
   2 ?    4.2   4.9    0.0071        42      12      35 ..      81     104 ..      78     105 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0044
                C....HHHCHHHHHHHHHH CS
      ApoC-I  8 feslpdklkEfgktledKa 26
                +es+++++kE  + ++dK 
  KHJ32652.1 37 IESVKKQVKETDQAIADKI 55
                5788999999999999985 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0071
                 .HHHCHHHHHHHHHHCCHCCCHCT CS
      ApoC-I  12 pdklkEfgktledKaraaieeIkq 35 
                 + k++E +++l d a+   eeIk+
  KHJ32652.1  81 KGKVEEKAEDLKDEAKNKKEEIKK 104
                 579*******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1487  (0.0829383); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 789.60
//
Query:       KHJ32653.1  [L=225]
Description: hypothetical protein EV44_g4470 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-39  136.1   1.1    1.6e-39  135.8   1.1    1.1  1  DUF5308      Family of unknown function (DUF5308)
  ------ inclusion threshold ------
      0.059   12.6   0.2       0.28   10.3   0.1    1.8  2  Glutaminase  Glutaminase


Domain annotation for each model (and alignments):
>> DUF5308  Family of unknown function (DUF5308)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.8   1.1   1.8e-43   1.6e-39       2     164 ..      11     196 ..      10     197 .. 0.74

  Alignments for each domain:
  == domain 1  score: 135.8 bits;  conditional E-value: 1.8e-43
     DUF5308   2 tLslHLtDraLtPlltsa............rsqaqleaLtsLtstalsaheaasrlgLGapqrimVetessgpvvlqsyldpaeaa..........ass 78 
                 +++lHL+D++L+P+++sa             + aq+++L+sLt++a++a++a sr++ G p +i+V+t+ssgp++++syl+p++a+          +  
  KHJ32653.1  11 RVALHLADKTLSPIFSSAeldttvqpgvtnFDLAQASSLSSLTNVAVTAYDALSRFRAGIPLSIIVKTKSSGPILISSYLNPHDAYehedhqrsqlN-- 107
                 79****************************9******************************************************966653333320.. PP

     DUF5308  79 ssspesaasssadssrekktesaeaeeqdqlagaetssagsaaaeeee...............edaapmLvgvvvAksaeeakeArraaarLervgrev 162
                     + +++++++++     +s +ae+q++++ a+    +       +               ++ +p+L+++ vA+s++++++A++ +++L++ gre+
  KHJ32653.1 108 ----KISKNENKNPQ--FPPKSVNAETQHRVKDASVAYGDP------TkrpnnkivadkihnsSPLPPLLIASAVARSSTDSADANKGIRKLIKAGREC 194
                 ....22222222222..111111111112221111111111......122222345555566699********************************** PP

     DUF5308 163 Qr 164
                 Q+
  KHJ32653.1 195 QK 196
                 *8 PP

>> Glutaminase  Glutaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0     0.048   4.3e+02      95     151 ..      81     139 ..      77     141 .. 0.75
   2 ?   10.3   0.1   3.1e-05      0.28      69     145 ..     141     213 ..     135     220 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.048
                  HHHHHHHHHSSSSSHHHHHHHHHHHHHHHHST...T-EE-HHHHHHHHCC-HHHHHHHH CS
  Glutaminase  95 aGAivvasllkgesaeerferileflrklagre..klsldeevakseketadrnralay 151
                  +G i+++s l++++a e+ ++ ++ l+k++++e  + ++  + ++ e+++  + +++ay
   KHJ32653.1  81 SGPILISSYLNPHDAYEHEDHQRSQLNKISKNEnkNPQFPPKSVNAETQHRVKDASVAY 139
                  79999999888888888888888888888887423777777777777777777666665 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 3.1e-05
                  ---SS-TT-HHHHHCTTT--C-TTSHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHST.T-EE-HHHHHHHHCC-HH CS
  Glutaminase  69 epsgeafnsivqleeekgkprNpminaGAivvasllkgesaeerferileflrklagreklsldeevakseketadr 145
                  +p++++ n+iv+ + +++ p  p++ a A++ +s  ++++a++ ++++++  r+   ++k  ++e++ +s +++++r
   KHJ32653.1 141 DPTKRPNNKIVADKIHNSSPLPPLLIASAVARSST-DSADANKGIRKLIKAGRE---CQKAWIKEKIEASSSNNSNR 213
                  699****************************9998.445666555555555555...55558889988777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1593.68
//
Query:       KHJ32654.1  [L=628]
Description: putative ferric-chelate reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-23   83.6   4.3    1.2e-23   83.6   4.3    2.3  2  Ferric_reduct  Ferric reductase like transmembrane component
    7.7e-20   71.6   0.0    2.6e-17   63.4   0.0    2.3  1  NAD_binding_6  Ferric reductase NAD binding domain
      1e-11   44.8   0.0    1.4e-09   38.0   0.0    2.4  1  FAD_binding_8  FAD-binding domain


Domain annotation for each model (and alignments):
>> Ferric_reduct  Ferric reductase like transmembrane component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1      0.21   1.2e+03      76      92 ..      62      78 ..      31      92 .. 0.70
   2 !   83.6   4.3     2e-27   1.2e-23       2     123 ..     186     304 ..     185     306 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.21
  Ferric_reduct 76 kkpynllGvlallllii 92
                   + +++ lG++a+++l++
     KHJ32654.1 62 QLLWWSLGLMAIIILVL 78
                   34556688888888886 PP

  == domain 2  score: 83.6 bits;  conditional E-value: 2e-27
  Ferric_reduct   2 GiaalillplalllalRnnflepltglsldklllfHkwlgvlafllallHvilyllnflrfsaldeerlldsllkkpynllGvlalllliilaitS 97 
                    G++a++++  ++++a+Rnn+l p++++s+d+++l+H+w+g++++l ++lH++++++ +++ +   ++++ d++l + +  +G++a++++++++++S
     KHJ32654.1 186 GVLAIVNMIPLVMFAGRNNPLIPILQVSFDTYNLLHRWTGRIVVLESVLHTACWAYVKYAATG--WKGVRDQILDDKFSGWGMIATVCMMFILLIS 279
                    99*********************************************************9886..9****************************** PP

  Ferric_reduct  98 lkfirrrlsyelFyylHhllyvayll 123
                    l++ir + +ye+F   H++  + +l 
     KHJ32654.1 280 LSPIR-HAFYETFINAHIVSTIGILA 304
                    *****.*************9887775 PP

>> NAD_binding_6  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.4   0.0   4.4e-21   2.6e-17       2     155 ..     479     610 ..     478     611 .. 0.92

  Alignments for each domain:
  == domain 1  score: 63.4 bits;  conditional E-value: 4.4e-21
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6   2 envllvagGiGitpfisilkdllkkskkealktkkikliwvvressslewfkdvLneleeekse.gnieihiYlTseyeaedasdqlissiegens 96 
                     +v+l ag +Git  i+++++l+++s ++++ t+ki+liw++r+s++lew++  ++ + ++  +   + ++ ++T+ ++  + ++ ++        
     KHJ32654.1 479 GHVVLFAGSSGITHQIPFVRHLIETSTERTVATRKITLIWIIRDSDHLEWVRPWMDVILRMPGRrECLVVKLFVTRPRNPAEIRSPSN-------- 566
                    689****************************************************9999998887899*********99988877332........ PP

                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6  97 eslkqgvdavsgtrnvkihfgRPnlkevlkdiaskhknssvgvfvCGppklvkevkklv 155
                                   v++  gRPn+  +++++ + ++ +   v+vCGp +l+++v+++v
     KHJ32654.1 567 --------------TVQMYPGRPNVPLLIQNE-VSEQVGAMCVTVCGPGGLADNVREAV 610
                    ..............368999************.88889999***************986 PP

>> FAD_binding_8  FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.0   0.0   2.3e-13   1.4e-09       5     106 ..     350     470 ..     346     473 .. 0.82

  Alignments for each domain:
  == domain 1  score: 38.0 bits;  conditional E-value: 2.3e-13
  FAD_binding_8   5 skakvalleedliklkvskpkkslkykaGqyvyinipslsklfwqsHPFtiasape....ddklslvikvksgltkklakkllsssk......... 87 
                    + a+v+ l +d  +++++ p k +++k+G ++y+ + s++++  +sHPF+ia  ++    + +++l   +++++  +l++  +   +         
     KHJ32654.1 350 TTASVQALSGDACRVTLHCPRK-FNAKPGTHAYLRFGSVNPW--ESHPFSIAWIEHkaaaQASIDLPTIEEKKFKGRLRESDTVT-Dvsfiihaqt 441
                    5689999**************9.*****************55..********988866667777777777777777777654444.2578999999 PP

  FAD_binding_8  88 ..........kelenkkaklkvlidGPYG 106
                               + + k  +l+ +i+GPYG
     KHJ32654.1 442 gmtrqlhtkaFSYQPKVLTLRAAIEGPYG 470
                    9999999977444557888899******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (628 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       641  (0.0357521); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4308.76
//
Query:       KHJ32655.1  [L=107]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 805.77
//
Query:       KHJ32656.1  [L=247]
Description: hypothetical protein EV44_g3666 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-36  125.4   0.2    2.5e-36  125.3   0.2    1.0  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.3   0.2   1.4e-40   2.5e-36       5     209 ..      22     238 ..      18     247 .] 0.94

  Alignments for each domain:
  == domain 1  score: 125.3 bits;  conditional E-value: 1.4e-40
                 T.......S-EEE......-THHHHCTB--...........-------HHHH................HCCHTS--EEEEEEBCCGCCCSBB-GGGGGG CS
       RVT_1   5 g......pgsyRpisllsvdykalnkliakrLkdvl..ekllsenqpgfrpgrstldav...edllkalkkkkkaklllklDlkkaFdsvpleellrkl 92 
                 g      p+ yR+is+ls+++k+ +++ia+rL+ ++  + ll+++q g r ++s +da    ++  +++k+++  + +l+lD+k+ Fd+v  ++l + l
  KHJ32656.1  22 GkpdysqPKAYRVISVLSCLGKISERIIAQRLSYLAetSDLLHDSQIGGRLKKSAIDAAlllTNEIQTNKNHNLMTSALFLDVKGDFDHVVKNQLVEIL 120
                 44458899****************************9999*******************9997777787999999************************ PP

                 G-EEET.........................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHH......HHHHHH CS
       RVT_1  93 tafkvptklinliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskee......lqelle 185
                 ++ ++pt+li +i sfls+r+ ++ ++g++ +++++++g+pqGs++SP+lf +++ +l+ + +      ++++Y+D i +++ sk+       l++   
  KHJ32656.1 121 KNKRLPTNLIAWIASFLSERELRLAFDGQSEHFSKINTGIPQGSPVSPILFLIYIKDLFASRAV-----KIIAYVDKICLIAASKSIrrnikiLEREAA 214
                 *****************************99*****************************9996.....9**************99999********** PP

                 HHHHHHHHTT--BEGGG-EEE... CS
       RVT_1 186 aveewlkesglkinpeKtklvlft 209
                  + e+  ++ + +  +Kt+l++f 
  KHJ32656.1 215 QLYERGDQNDIDFDLAKTELIHFS 238
                 *********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1785.44
//
Query:       KHJ32657.1  [L=381]
Description: putative fungal specific transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.5e-10   38.5   0.4    1.1e-09   37.7   0.4    1.3  1  Fungal_trans  Fungal specific transcription factor domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.4   6.1e-14   1.1e-09      68     177 ..      46     150 ..       6     175 .. 0.81

  Alignments for each domain:
  == domain 1  score: 37.7 bits;  conditional E-value: 6.1e-14
  Fungal_trans  68 efiafplraeili..hedfsspssslwilqsLlllelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFyl 162
                     ++f+l   i    ++df+   s + ++ s  +l++  + +  +++ ++++  a+++ +++g+h+++ y        l+ eea +rrR++w  +++
    KHJ32657.1  46 AAAHFFLNECISVrqSYDFVEDKS-FSAISSSYFLSTAFFELNQNRKSWYYLREALTMGQDIGFHDESTYRD------LPTEEALCRRRTFWILYVT 135
                   466777776666675667777777.9999988888888888888899*************************......9***9************** PP

  Fungal_trans 163 DktialklGrpplld 177
                   ++ +a+  + p +l+
    KHJ32657.1 136 ERSFAILRNKPLTLS 150
                   ******999988655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2664.03
//
Query:       KHJ32658.1  [L=97]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       791  (0.0441185); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 717.10
//
Query:       KHJ32659.1  [L=347]
Description: putative air1 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.07   13.3   0.1        0.2   11.8   0.1    1.8  1  DUF1874   Domain of unknown function (DUF1874)


Domain annotation for each model (and alignments):
>> DUF1874  Domain of unknown function (DUF1874)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   1.1e-05       0.2       8      56 ..      18      63 ..      12      93 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.1e-05
                -GGB-SE......EEEEEEE-HHHHHSSTTEEE----HHHHHHHHHHHT CS
     DUF1874  8 vltlkeeglykiekitieeakellkenneefvsaiGHeataellselld 56
                    +e+g ++ ++++ie++ ++lk+  ++  + iG + ++ +++e+ +
  KHJ32659.1 18 QT--SEKGEFQSSQVVIEKIGDVLKKM-KGCLNKIGLKGMIMMVEEVDE 63
                33..3999*****************87.89*********9999988643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2536.45
//
Query:       KHJ32660.1  [L=231]
Description: hypothetical protein EV44_g4025 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0014   18.1   0.0     0.0023   17.5   0.0    1.3  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   1.3e-07    0.0023     165     220 ..       4      85 ..       1      87 [. 0.90

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.3e-07
                 ECTTEEEEEESSHHH......HHHHHHHHHHHHHHTT--BEGGG-EEE.........................ESSEEETTE CS
       RVT_1 165 rYaDDililskskee......lqelleaveewlkesglkinpeKtklvlft...................v.kseevkyLGv 220
                  ++DD+ +++ + ++      l+ + +++ +w+k++g +++p K +l++f                       ++e+k+LGv
  KHJ32660.1   4 GFVDDTNLVAWGCSArencytLKLAHSKCLAWAKRYGAEFAPGKYQLIHFSrkrgssedlkekieleditInPRSEIKVLGV 85 
                 699****998885555789**********************************************9998636*********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1656.30
//
Query:       KHJ32661.1  [L=188]
Description: hypothetical protein EV44_g4037 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-11   43.4   0.0    4.1e-11   42.8   0.0    1.3  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase
    2.2e-05   24.1   0.9    3.6e-05   23.4   0.9    1.4  1  Exo_endo_phos    Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.8   0.0   4.6e-15   4.1e-11       3      97 ..      79     167 ..      77     179 .. 0.89

  Alignments for each domain:
  == domain 1  score: 42.8 bits;  conditional E-value: 4.6e-15
  Exo_endo_phos_2   3 iisvYippsdelenlestlekllselkspkiiilGDfNakhplWgsedtdssargeeLiefleehslsllnllksgptfkssngsstiDltlts 96 
                      i ++Y+ p    +++ s l+kll+ + + ++ i+GDfN++hplW+   ++ + +++++ie+  ++ l+lln+ k +pt+++     t+Dl l +
       KHJ32661.1  79 IWNIYNAPIG-SDEAGSGLDKLLRCTEK-PFFIGGDFNLRHPLWDPIVDHPRTNCDSFIEWYGSNFLKLLNPIK-TPTHNRG---GTLDLALCT 166
                      6789999999.999************97.9****************998889****************999988.7787553...57***9988 PP

  Exo_endo_phos_2  97 d 97 
                      d
       KHJ32661.1 167 D 167
                      7 PP

>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.9   4.1e-09   3.6e-05      32     206 ..       2     167 ..       1     178 [. 0.73

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 4.1e-09
                    SEEEEEEEBSCTCHHHHHHHHHTTCEEEEECCHECSSSTTSSEEEEEECSTEEEEEEEEEEETSSSSGCEEEEEEEEEEEEEEE..........CC CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........xx RF
  Exo_endo_phos  32 DvlgLQEvdddelsriplllalggflgasstsptgggggggnggavlsrfpltslfrrtfiefndlvaalrreplaakleqlni..........as 117
                    Dvl++QE + +                          ++++++  v++++  t   r  +  + +++a+lr   ++ ++  + +            
     KHJ32661.1   2 DVLLIQEPWTYRDLSK--------------------QRTKTHKSYVAFSPLATWHTRPRVLTYVRKDARLRPFQTGIDYSRDIVqisliirknlVV 77 
                    6777777444432221....................245555556666666666666666666666666666666666666666667777777766 PP

                    CHHGHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SSSTSGGGBSCGHHHHHHCTTTHH.SSCESCETTTTTTTTTTTEB-BEEEEEEC CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 118 hrdhdlvrdlqllalllqvealnadrgapvivaGDfNarpsdddsrvlrtrglalapapv.glyllgggptptyvtraggsrlDrilasp 206
                    + ++ +            ++ l + + +p+++ GDfN r+  +d  v  +r + ++   + g + l   +   ++t++ g++lD +l ++
     KHJ32661.1  78 PIWNIYNAPIGSDEAGSGLDKLLRCTEKPFFIGGDFNLRHPLWDPIVDHPRTNCDSFIEWyGSNFLKLLNPIKTPTHNRGGTLDLALCTD 167
                    6777777777777777777888888999*******************8888887776555*************************99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       231  (0.0128842); expected 358.6 (0.02)
Passed bias filter:                      227  (0.0126611); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1442.92
//
Query:       KHJ32662.1  [L=387]
Description: hypothetical protein EV44_g1415 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-43  147.0   4.5    1.4e-42  145.8   4.5    1.6  1  DUF3752   Protein of unknown function (DUF3752)


Domain annotation for each model (and alignments):
>> DUF3752  Protein of unknown function (DUF3752)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.8   4.5   7.8e-47   1.4e-42       1     152 []     217     382 ..     217     382 .. 0.94

  Alignments for each domain:
  == domain 1  score: 145.8 bits;  conditional E-value: 7.8e-47
     DUF3752   1 PPessdlssrvdptklknrkFatgkaakaa...agdsslWteTPeekakrladevlgrkekaaaaaaake..........akekkreeeetaekvkeyn 86 
                 PP+s dl+sr+dptklknrkF++g++ k++   +g+s++WteTPeek+krladevlgr++ ++a++ ++           +++ ++e  +t+ek++e+n
  KHJ32662.1 217 PPDSLDLTSRIDPTKLKNRKFTSGRGIKRPadgSGVSAIWTETPEEKRKRLADEVLGREDATSASSLSRLaksnpsqvscNARISKEIMATKEKINEFN 315
                 9***********************777777777***************************999988777788999***99777777779********** PP

     DUF3752  87 ekkRgksLveehqekkkkkkkkeeeeddpskraFDrekDmal.grriskaqrkellkkaadfgsRFs 152
                 + +R+ksL+ee+++++ +++ +  e+ddps raFDrekDm+l gr++++a+rk++l  a++fg+RF+
  KHJ32662.1 316 KLNRNKSLLEERKAAQDRGELELLEDDDPSHRAFDREKDMSLgGRHVNTANRKQFLMHAKNFGNRFQ 382
                 *******************9999*******************9999********************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2743.98
//
Query:       KHJ32663.1  [L=108]
Description: putative peptidyl-prolyl cis-trans isomerase h [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-26   93.3   0.0    1.9e-26   93.2   0.0    1.0  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso
  ------ inclusion threshold ------
       0.09   12.8   0.0       0.12   12.4   0.0    1.2  1  Thioredoxin_3  Thioredoxin domain


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.2   0.0   2.1e-30   1.9e-26      50     157 ..       1     106 [.       1     107 [. 0.89

  Alignments for each domain:
  == domain 1  score: 93.2 bits;  conditional E-value: 2.1e-30
  Pro_isomerase  50 mvqgGdptgktsageqekkggesiraipdEitsklkh.krGalamartgkepnsagsqFfItlkeaphldgkytvFGkVveGmdvvekiekvetde 144
                    m+qgGd+ +++ +g+++  g    ++++dE+ + +kh ++G+l+ma++g  pn +gsqFfIt +++p+ldgk++vFGkV eG++v+ k+ +v+t  
     KHJ32663.1   1 MCQGGDFINGDGTGTTCIYGT---KTFADEN-FLIKHsEAGILSMANAG--PNDNGSQFFITAAPTPFLDGKHVVFGKVFEGLEVLHKMLNVKTGY 90 
                    89****999987777664444...49*****.9999*899*******98..8***************************************99998 PP

  Pro_isomerase 145 ...erpkknvkivsae 157
                       + p+ +v i+ ++
     KHJ32663.1  91 rgkDVPNLDVIIAACG 106
                    8778888888888886 PP

>> Thioredoxin_3  Thioredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.3e-05      0.12       7      71 ..      14      79 ..      13      85 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.3e-05
                   SSSSTTCHHHHHHHHHHCHCCT.CECEEECCTTHHHHHHCT-SSSSEEECTTCEEEESS---CCHH CS
  Thioredoxin_3  7 gpgCakCpklekavkeaaaekg.ikaevekvtdfeeiekygVmsvPalvidgkvvvsGkvpseeei 71
                   g++C +  k+ +  + +++ ++   +++ ++  +++ +++ +++ P+ ++dgk vv Gkv ++ e+
     KHJ32663.1 14 GTTCIYGTKTFADENFLIKHSEaGILSMANAGPNDNGSQFFITAAPTPFLDGKHVVFGKVFEGLEV 79
                   56777777777777778888854777899999999999999*******************998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       188  (0.0104858); expected 358.6 (0.02)
Passed bias filter:                      173  (0.00964917); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 849.73
//
Query:       KHJ32664.1  [L=284]
Description: putative dna repair protein dds20 mei5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0089   15.9  16.1      0.044   13.6  16.1    2.5  1  Mei5      Double-strand recombination repair protein
  ------ inclusion threshold ------
      0.049   14.1   1.0      0.089   13.2   0.1    1.8  2  DUF2340   Uncharacterized conserved protein (DUF2340)
      0.094   12.3   1.7       0.13   11.8   1.7    1.3  1  DUF1444   Protein of unknown function (DUF1444)


Domain annotation for each model (and alignments):
>> Mei5  Double-strand recombination repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6  16.1   7.4e-06     0.044      96     206 .]      80     276 ..       2     276 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 7.4e-06
                 XXXXXXX...............XXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH.......HHHHHHHHHHHHHHHHHHHHHHHHH..... CS
        Mei5  96 rdvcksesslilnslkekie..lekkeLeeekakLekqvrekeelLrrLklvkkyeskndls.......eLqllikkwrnasqklleeLqkala..... 180
                 r+ c  + +     + + ++  +    L+  ++ Lekq +e +e+L  +  +kk+e ++  +       eL  li kw  as +++eeL+++++     
  KHJ32664.1  80 RNYCSKK-KQHSLRTTAILNedPDVSSLLRTQQNLEKQLKEVNEQLDIADQAKKIEQESAKKgyvevdgELSELITKWTLASRQAAEELFSKVQdrvnr 177
                 3333333.2222222233335567789****************************988764433333349***************************** PP

                 .........................................................................SSTTT---HHHHHHHTT--TTTS-EE CS
        Mei5 181 .........................................................................esenkeltlteLidryglddkLlhyn 206
                                                                                           +e+ ++t++++++ + +d k + y+
  KHJ32664.1 178 mggprawkemerrrlenfrqwdqddtqninsskdnkkewmensmerrdiyaeysidpeteiersqrhesieefPGEEDDFTMAMMLKTMNIDLKVIGYD 276
                 *******************************99999999999999999999999999999998888888888866788*************99999886 PP

>> DUF2340  Uncharacterized conserved protein (DUF2340)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.65   3.9e+03      71      91 ..      95     114 ..      84     141 .. 0.58
   2 ?   13.2   0.1   1.5e-05     0.089      25     102 ..     160     239 ..     148     253 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.65
     DUF2340  71 lvinlddddelilkdeektLa 91 
                  ++n d d + +l++ +++L+
  KHJ32664.1  95 AILNEDPDVSSLLRT-QQNLE 114
                 456666666555555.23332 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 1.5e-05
     DUF2340  25 ktttvkdllelvkeeiktesglkpfrnvkydtlKiytkahgsKttnlvinlddddelilkd..eektLaelgvenEtels 102
                 +++ +++l+++v++++++ +g +++++++   l  + +  +  t+n+  + d+++e++ ++  + +  ae+ ++ Ete+ 
  KHJ32664.1 160 SRQAAEELFSKVQDRVNRMGGPRAWKEMERRRLENFRQWDQDDTQNINSSKDNKKEWMENSmeRRDIYAEYSIDPETEIE 239
                 567899****************************************99999*9999*988865677899*********96 PP

>> DUF1444  Protein of unknown function (DUF1444)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.7   2.2e-05      0.13       7      83 ..     110     187 ..     105     223 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.2e-05
     DUF1444   7 kkeleerlkeeevtfsfdrekdtlriedketkkg...vtislkeiiakyeekkekaidevveyveealkalkeeaelegk 83 
                 +++le++lke  v+ + d  +++ +ie+++ kkg   v+ +l+e+i+k+    ++a +e+ + v++ ++ +   ++ +  
  KHJ32664.1 110 QQNLEKQLKE--VNEQLDIADQAKKIEQESAKKGyveVDGELSELITKWTLASRQAAEELFSKVQDRVNRMGGPRAWKEM 187
                 6788888865..55566778888899999999986446679**************************9999877665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (284 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1549  (0.0863963); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2205.92
//
Query:       KHJ32665.1  [L=543]
Description: putative ring-8 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      3e-12   46.6   7.2    5.1e-12   45.9   7.2    1.4  1  zf-RING_2     Ring finger domain
    8.4e-09   35.0   1.7    1.6e-08   34.2   1.7    1.5  1  zf-RING_11    RING-like zinc finger
      5e-08   32.7   6.2    8.5e-08   31.9   6.2    1.4  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    2.9e-07   30.3   5.6    5.4e-07   29.4   5.6    1.5  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
      9e-07   28.8   4.9    1.5e-06   28.0   4.9    1.4  1  zf-RING_5     zinc-RING finger domain
      2e-06   27.9   9.2    8.9e-06   25.9   9.2    2.0  1  zf-rbx1       RING-H2 zinc finger domain
    1.2e-05   25.2   1.1    3.6e-05   23.7   0.2    2.2  2  zf-RING_UBOX  RING-type zinc-finger
     0.0012   18.8   2.1     0.0035   17.4   2.1    1.8  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
     0.0039   17.0   3.4     0.0068   16.2   3.4    1.3  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
     0.0054   16.3   4.2     0.0091   15.6   4.2    1.3  1  Zn_ribbon_17  Zinc-ribbon, C4HC2 type
  ------ inclusion threshold ------
      0.017   14.9   5.3      0.035   14.0   5.3    1.5  1  Prok-RING_4   Prokaryotic RING finger family 4
      0.019   14.7   6.5      0.033   14.0   6.5    1.4  1  zf-RING_4     RING/Ubox like zinc-binding domain
      0.064   13.2   6.1       0.12   12.3   6.1    1.5  1  PHD           PHD-finger
      0.069   13.3   3.3       0.19   11.9   3.3    1.8  1  FANCL_C       FANCL C-terminal domain
       0.38   11.0   5.8       0.93    9.7   5.8    1.7  1  zf-C3HC4_4    zinc finger of C3HC4-type, RING
       0.77    9.9   7.1        1.6    9.0   7.1    1.5  1  RINGv         RING-variant domain
       0.93   10.1   0.0       0.93   10.1   0.0    2.7  3  OAD_gamma     Oxaloacetate decarboxylase, gamma chain
          2    8.4   5.6       0.23   11.4   0.4    1.9  2  Prok-RING_1   Prokaryotic RING finger family 1


Domain annotation for each model (and alignments):
>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   7.2   5.1e-15   5.1e-12       1      44 []     285     329 ..     285     329 .. 0.96

  Alignments for each domain:
  == domain 1  score: 45.9 bits;  conditional E-value: 5.1e-15
   zf-RING_2   1 deCpICleelssadsvlllpCgHvfhreClerwlrssst.CPlCr 44 
                 d+C+IC + l+++d+v+ l CgH fh +Cl+ wl++++  CPlC+
  KHJ32665.1 285 DSCAICIDTLEEEDEVRGLSCGHAFHASCLDPWLTNRRAcCPLCK 329
                 58***************999**************999889****7 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   1.7   1.6e-11   1.6e-08       2      29 .]     287     314 ..     286     314 .. 0.98

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 1.6e-11
  zf-RING_11   2 CsICLeefkpgqalfilpCsHtFHfkCI 29 
                 C+IC+++++++++++ l+C+H+FH  C+
  KHJ32665.1 287 CAICIDTLEEEDEVRGLSCGHAFHASCL 314
                 ***************************5 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   6.2   8.5e-11   8.5e-08       2      40 .]     287     328 ..     286     328 .. 0.92

  Alignments for each domain:
  == domain 1  score: 31.9 bits;  conditional E-value: 8.5e-11
  zf-C3HC4_2   2 CpiCldmlkdpsvvt..pCgHvfCqkCilrsLeekn.eCPlC 40 
                 C+iC+d l++   v    CgH f+++C++++L++    CPlC
  KHJ32665.1 287 CAICIDTLEEEDEVRglSCGHAFHASCLDPWLTNRRaCCPLC 328
                 ********988777777*****************9999**** PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   5.6   5.4e-10   5.4e-07       1      41 []     287     328 ..     287     328 .. 0.95

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 5.4e-10
                 -TTT-S--SS-E...E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn..elleCkHsfCskCirkilksrkkvkCPlC 41 
                 C+iC ++++e++  + l C+H+f+ +C++ +l  ++  +CPlC
  KHJ32665.1 287 CAICIDTLEEEDevRGLSCGHAFHASCLDPWLT-NRRACCPLC 328
                 ***********98889*****************.88888**** PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   4.9   1.5e-09   1.5e-06       2      43 ..     287     329 ..     286     330 .. 0.96

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 1.5e-09
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll.ekeavCpiCr 43 
                 C +C + l++e+++  +sCgH f+ +Cl+  l +++a+Cp+C+
  KHJ32665.1 287 CAICIDTLEEEDEVRGLSCGHAFHASCLDPWLtNRRACCPLCK 329
                 ******************************999*********8 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   9.2   8.9e-09   8.9e-06      15      55 .]     291     329 ..     284     329 .. 0.68

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 8.9e-09
     zf-rbx1  15 ieckapgdeecpvvlG.eCgHaFHlhCiskWlkt.rkvCPlcr 55 
                 i+  +++de    v G +CgHaFH  C++ Wl++ r+ CPlc+
  KHJ32665.1 291 IDTLEEEDE----VRGlSCGHAFHASCLDPWLTNrRACCPLCK 329
                 333333333....34448**************9956669***6 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.2   3.7e-08   3.6e-05       1      38 [.     287     324 ..     287     326 .. 0.75
   2 ?   -0.6   0.1       1.4   1.4e+03       1      11 [.     325     335 ..     325     338 .. 0.79

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 3.7e-08
  zf-RING_UBOX   1 CpIClelftdP..lv.lpCGHtFCreClwelskslegafkC 38 
                   C IC +++++   +  l+CGH F+ +Cl   +++l +++ C
    KHJ32665.1 287 CAICIDTLEEEdeVRgLSCGHAFHASCL---DPWLTNRRAC 324
                   ********9555567789**********...4444444444 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.4
  zf-RING_UBOX   1 CpIClelftdP 11 
                   Cp C+ ++  P
    KHJ32665.1 325 CPLCKADYYIP 335
                   *****777566 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   2.1   3.5e-06    0.0035      41      83 ..     283     334 ..     274     336 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 3.5e-06
                 TTTTS-E..........EEBT.TS-EEEHHHHHHHHHHHSTSSB-TTTSSB--B CS
  zf-ANAPC11  41 pGddcpl..........vlGk.ckhnfhlhcilkwletetskglcpmcrqtfkl 83 
                 pGd c++          v G  c h+fh+ c+  wl ++  +  cp+c+  +++
  KHJ32665.1 283 PGDSCAIcidtleeedeVRGLsCGHAFHASCLDPWLTNR--RACCPLCKADYYI 334
                 5555555111111111145656**************875..679****998875 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   3.4   6.8e-06    0.0068       4      46 ..     286     331 ..     284     333 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 6.8e-06
                 B-TTTSSS...BS-EEETTEEEEEE-HHHHHHHHH.TT-B-TTT--B CS
  zf-C3HC4_3   4 eCviCler...prnvvllpCgHlvlCeeCaekllk.rkkkCpiCrrp 46 
                  C iC ++   + +v  l CgH  +  +C++ +l  r++ Cp+C+++
  KHJ32665.1 286 SCAICIDTleeEDEVRGLSCGHA-FHASCLDPWLTnRRACCPLCKAD 331
                 7****99544488899*******.*********999********986 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   4.2   9.1e-06    0.0091       5      46 ..     285     326 ..     281     329 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 9.1e-06
  Zn_ribbon_17   5 ksCayCelavkgr.vvlcgvCeHvlHasCarewfenddlaeCp 46 
                    sCa+C  +++    v   +C+H  HasC++ w++n   a Cp
    KHJ32665.1 285 DSCAICIDTLEEEdEVRGLSCGHAFHASCLDPWLTNRR-ACCP 326
                   57999977776541566789****************99.7777 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   5.3   3.5e-05     0.035       1      38 [.     287     330 ..     287     333 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.5e-05
  Prok-RING_4   1 CvlCgeq...ekkailepCgHlvCkeCfdskdls...sCPlCqr 38 
                  C +C      e +++  +CgH +  +C+d +  +    CPlC+ 
   KHJ32665.1 287 CAICIDTleeEDEVRGLSCGHAFHASCLDPWLTNrraCCPLCKA 330
                  66665444338888999**************7776789****85 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   6.5   3.3e-05     0.033       1      47 [.     287     332 ..     287     333 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.3e-05
   zf-RING_4   1 cplCdeeldetdkdlkpCeCgyqiClfCyhrileeeegrCPaCreeY 47 
                 c +C++ l+e+d +++  +Cg+ +   C++  l++  ++CP C+ +Y
  KHJ32665.1 287 CAICIDTLEEED-EVRGLSCGHAFHASCLDPWLTNRRACCPLCKADY 332
                 899*****7776.57888***************************99 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   6.1   0.00012      0.12       2      51 ..     287     330 ..     286     331 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00012
                 BTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   2 CavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCke 51 
                 Ca+C + + eee+ v   +C+++fH +Cl+p l++++      +C+ Ck 
  KHJ32665.1 287 CAICID-TLEEEDEVRGLSCGHAFHASCLDPWLTNRRA-----CCPLCKA 330
                 ******.8999999******************994444.....8999985 PP

>> FANCL_C  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   3.3   0.00019      0.19       4      44 ..     286     321 ..     284     331 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00019
                 S-SSS--SS-TT-----B--S-TT----B-SGGGHHHHHHH CS
     FANCL_C   4 eCgiCyayrldsgevpdisCdnekCnkkfHsaCLkeWlrsl 44 
                 +C iC     +++ev        +C++ fH++CL  Wl + 
  KHJ32665.1 286 SCAICIDTLEEEDEVRGL-----SCGHAFHASCLDPWLTNR 321
                 699999888888888765.....57899**********876 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   5.8   0.00094      0.93       1      42 []     287     328 ..     287     328 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00094
  zf-C3HC4_4   1 CPiCldYLekP...vsleCGhsfClsCisslqkepdgeqllCplC 42 
                 C iC d Le+      l+CGh f  sC++ +  +  +    CplC
  KHJ32665.1 287 CAICIDTLEEEdevRGLSCGHAFHASCLDPWLTNRRA---CCPLC 328
                 999999998752214589*************999976...6**99 PP

>> RINGv  RING-variant domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   7.1    0.0016       1.6       1      48 []     287     328 ..     287     328 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0016
                 ETTTTEE-SSSS--B-SS--STCCCSB-HHHHHHHHHHTCT-SB-TTT CS
       RINGv   1 CriCleeeeeseplispCkCrGslklvHesClekWldekeantqCeiC 48 
                 C iC ++ ee++  ++  +C    + +H sCl+ Wl++  +   C +C
  KHJ32665.1 287 CAICIDTLEEED-EVRGLSCG---HAFHASCLDPWLTN--RRACCPLC 328
                 899999977766.56777774...69***********9..8899*999 PP

>> OAD_gamma  Oxaloacetate decarboxylase, gamma chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00094      0.93       8      36 ..      71      99 ..      67     112 .. 0.84
   2 ?   -2.0   0.6       5.5   5.5e+03      37      57 ..     174     194 ..     166     214 .. 0.51
   3 ?   -2.4   0.2       7.8   7.8e+03      51      65 ..     258     272 ..     245     275 .. 0.42

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00094
   OAD_gamma  8 llGmgvVFvvLilLslvislfskiikkka 36
                 lG+gvVF+ L +++ v ++f++ ++  a
  KHJ32665.1 71 ALGFGVVFTNLWIIVGVKYCFRYNARNRA 99
                69******************998776655 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 5.5
   OAD_gamma  37 kkkkkkakaaaaaaaaaaaaa 57 
                 +++++k++++++ ++++++a+
  KHJ32665.1 174 NESQEKPPQNSNFPEEQPSAT 194
                 333333333333333333333 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 7.8
   OAD_gamma  51 aaaaaaaeldddeel 65 
                 ++++++++++dd+  
  KHJ32665.1 258 TTKEEEDDDEDDQIH 272
                 222222244555555 PP

>> Prok-RING_1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.4   0.00023      0.23       4      35 ..     284     314 ..     281     317 .. 0.91
   2 ?   -1.7   0.7       2.8   2.8e+03      23      30 ..     325     332 ..     321     333 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00023
  Prok-RING_1   4 gkkCpvCgkelkeedDiVvCpeCgtpyHraCy 35 
                  g++C +C ++l+ee D V    Cg  +H +C 
   KHJ32665.1 284 GDSCAICIDTLEEE-DEVRGLSCGHAFHASCL 314
                  789********999.8899************6 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 2.8
  Prok-RING_1  23 CpeCgtpy 30 
                  Cp C++ y
   KHJ32665.1 325 CPLCKADY 332
                  88887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (543 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       743  (0.0414412); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3705.34
//
Query:       KHJ32666.1  [L=657]
Description: putative transcriptional regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-51  174.2   0.5    1.3e-51  174.2   0.5    2.3  2  Ada3      Histone acetyltransferases subunit 3
  ------ inclusion threshold ------
       0.69    7.8   1.5          1    7.2   0.2    1.7  2  Prominin  Prominin


Domain annotation for each model (and alignments):
>> Ada3  Histone acetyltransferases subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.2   4.6         2   1.8e+04      93     103 ..     134     144 ..      66     178 .. 0.49
   2 !  174.2   0.5   1.4e-55   1.3e-51       1     132 []     466     603 ..     466     603 .. 0.97

  Alignments for each domain:
  == domain 1  score: -5.2 bits;  conditional E-value: 2
        Ada3  93 rtrtlkkkkkk 103
                 r++  k kk+k
  KHJ32666.1 134 RSKVSKIKKRK 144
                 33333323322 PP

  == domain 2  score: 174.2 bits;  conditional E-value: 1.4e-55
        Ada3   1 ldyaqleeRlkqELreiGilepeedadkydgredDevaaeLrrlqaeLrevsliNgarkarLlelvkermayqeyqtiledlDkqvqqaYlKrtrtlkk 99 
                 ldyaq++eR+k ELr+iG+l +++++d yd+++dD+vaa+Lr lqa+L++++  NgarkarL elvke+ma+qe++tiledlD+qvq+aYlKrtrtl+k
  KHJ32666.1 466 LDYAQIDERIKLELRHIGFLPADSEPD-YDAHYDDDVAARLRYLQAKLKQIAILNGARKARLQELVKEKMAHQEFNTILEDLDSQVQAAYLKRTRTLGK 563
                 69******************9999997.*********************************************************************** PP

        Ada3 100 kkkkkrsga.......aaaaaaagaarpgigdalralmer 132
                 +kk kr g+        ++ + +g+arpgigd++++lmer
  KHJ32666.1 564 SKKAKRLGGtngssnmISNVSGSGMARPGIGDMTKTLMER 603
                 *****999999999887888899****************8 PP

>> Prominin  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1     0.037   3.3e+02     310     382 ..      70     140 ..      57     151 .. 0.72
   2 ?    7.2   0.2   0.00012         1     572     629 ..     501     558 ..     492     584 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.037
    Prominin 310 tskcldqlpnvdevlealeevletnlssivkeglarlneipekvknqtaevvpdlkkalakgreqikklakki 382
                 +++ ld l+n+ +v+ea  +v ++ +  +++   +rl+ei++  +++  e  + lk+++a+++e  ++  +ki
  KHJ32666.1  70 LDALLDRLKNLVHVVEARGSVCDKGMRLLAQTRKDRLEEIETERRED--ESKERLKRDVADEEEGGRSKVSKI 140
                 34445999999999999999********************9876654..444566666666665555555555 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.00012
    Prominin 572 iqkelenlkvdlsnlelLteeerkdLeklresglskihsslyleqlckkltkvnletl 629
                     l  l+ +l+++ +L+ + + +L++l + ++ + +++++le+l++++    l+ +
  KHJ32666.1 501 VAARLRYLQAKLKQIAILNGARKARLQELVKEKMAHQEFNTILEDLDSQVQAAYLKRT 558
                 5566788999*************************************99887777554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (657 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1277  (0.0712254); expected 358.6 (0.02)
Passed bias filter:                      604  (0.0336884); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.27s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 4477.58
//
Query:       KHJ32667.1  [L=331]
Description: putative e3 ubiquitin-protein ligase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.6e-11   43.4   9.1      0.012   16.5   0.1    4.8  5  WD40           WD domain, G-beta repeat
     0.0035   17.6   0.0        1.5    9.1   0.0    3.7  4  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
  ------ inclusion threshold ------
      0.014   14.2   0.0       0.37    9.5   0.0    2.7  2  Nucleoporin_N  Nup133 N terminal like
       0.14   12.7   0.0        8.3    7.0   0.0    2.5  2  PQQ_3          PQQ-like domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1     6e-06     0.027      12      38 .]      60      86 ..      51      86 .. 0.82
   2 ?   -0.0   0.0      0.44     2e+03      22      38 .]     111     132 ..      92     132 .. 0.67
   3 !   13.1   0.0     3e-05      0.13       8      34 ..     146     174 ..     140     178 .. 0.82
   4 ?   -1.4   0.1       1.2   5.4e+03      10      25 ..     194     210 ..     188     221 .. 0.61
   5 !   16.5   0.1   2.6e-06     0.012       8      38 .]     297     329 ..     290     329 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 6e-06
                SEEEEEEETTSSEEE.EEETTSEEEEEE CS
        WD40 12 svtslafspdgawla.sGsdDgtvriWd 38
                +vt++   + ++++a +Gs +g vriWd
  KHJ32667.1 60 NVTCCTSLDTNNLVAvAGS-NGEVRIWD 86
                4999999999999874788.*******9 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.44
                 SSE.EEEEET....TSEEEEEE CS
        WD40  22 gaw.lasGsd....DgtvriWd 38 
                 +++ la+Gs+      ++ +Wd
  KHJ32667.1 111 SQYvLACGSElinhEASIFLWD 132
                 4451456674555588888887 PP

  == domain 3  score: 13.1 bits;  conditional E-value: 3e-05
                 ESS.SSEEEEEEETTSSEEE.EEETTSEE CS
        WD40   8 tGH.ssvtslafspdgawla.sGsdDgtv 34 
                   H +++t+l+f+p ++ ++ sGs Dg +
  KHJ32667.1 146 QSHsDDITDLKFHPMSPNILlSGSTDGLI 174
                 479666************644***9*987 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 1.2
                 S.SSEEEEEEETTSSEE CS
        WD40  10 H.ssvtslafspdgawl 25 
                 H  s++++ f  d + +
  KHJ32667.1 194 HgASIHHCNFLNDFDIF 210
                 65568777655555554 PP

  == domain 5  score: 16.5 bits;  conditional E-value: 2.6e-06
                 ESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGH.ss.vtslafspdgawlasGsdDgtvriWd 38 
                 ++H s+ v+s+++ ++++ +++G++Dg+v+ W+
  KHJ32667.1 297 RAHgSDvVRSFCYFDEHRIIFTGGEDGKVKAWK 329
                 59*77767**********************995 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.36   1.6e+03      51      68 ..      28      45 ..      25      65 .. 0.80
   2 !    9.1   0.0   0.00034       1.5      41      80 ..      61     100 ..      51     111 .. 0.79
   3 ?    1.9   0.0     0.064   2.9e+02      32      67 ..     144     179 ..     130     214 .. 0.80
   4 ?    1.0   0.0      0.12   5.4e+02      34      63 ..     297     326 ..     275     329 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.36
  ANAPC4_WD40 51 klLavaysdgevrlldae 68
                 k Lav  sd ++rlld +
   KHJ32667.1 28 KSLAVLSSDDALRLLDPY 45
                 67999********99976 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00034
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                  v++      ++l ava s+gevr+ d+ s ++  s+++++
   KHJ32667.1  61 VTCCTSLDTNNLVAVAGSNGEVRIWDMRSSNLRGSVKTDD 100
                  555555567899*****************99988887765 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.064
  ANAPC4_WD40  32 leedkedsevrsLaWkpd.gklLavaysdgevrllda 67 
                  + +++++  +++L+++p   ++L  +  dg ++ ++ 
   KHJ32667.1 144 F-NQSHSDDITDLKFHPMsPNILLSGSTDGLINTFNT 179
                  4.6778889******9851689999999999987764 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.12
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevr 63 
                  +++ +  vrs+++  + +++  + +dg+v+
   KHJ32667.1 297 RAHGSDVVRSFCYFDEHRIIFTGGEDGKVK 326
                  455566789999999999999999999997 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   8.3e-05      0.37     177     252 ..     122     201 ..      51     224 .. 0.66
   2 ?   -0.1   0.0     0.067     3e+02     198     229 ..     298     329 ..     278     330 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 8.3e-05
                    EEE-SSSS-...--SSS--G.................----GG-EEEEEEECCT.CEEEEEETTSEEEEEEEETTCEE-EEEEEEEHHHHHHHH CS
  Nucleoporin_N 177 icltkgglssllsilpgvls.................gasereeivqlridssr.rilytlsskgvirvydlsasngesslksdidirqillea 252
                    i++                s                 ++s +++i+ l+ ++ + +il + s++g i++++++  ++e  l+++++   ++++ 
     KHJ32667.1 122 INHEA--------------SiflwdlrrigappllqfNQSHSDDITDLKFHPMSpNILLSGSTDGLINTFNTNITAEEEALYQTFNHGASIHHC 201
                    33333..............233444444444777777889*********************************999999999999987777765 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.067
                    ---GG-EEEEEEECCTCEEEEEETTSEEEEEE CS
  Nucleoporin_N 198 asereeivqlridssrrilytlsskgvirvyd 229
                    a+ ++ + +++  +++ri++t  ++g++++++
     KHJ32667.1 298 AHGSDVVRSFCYFDEHRIIFTGGEDGKVKAWK 329
                    6788999999999999***************7 PP

>> PQQ_3  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.034   1.5e+02       9      39 ..      57      88 ..      53      89 .. 0.70
   2 ?    7.0   0.0    0.0019       8.3       1      34 [.     281     326 ..     281     328 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.034
       PQQ_3  9 lpgpvnsspavdgglvyvgtg.dGtlyAlDae 39
                +++ v++ + +d + +++++g +G ++  D +
  KHJ32667.1 57 VGANVTCCTSLDTNNLVAVAGsNGEVRIWDMR 88
                5677777788887655555554**99988876 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0019
       PQQ_3   1 GevlWsv.........qlpg.pvnsspavdg..glvyvgtgdGtly 34 
                 G+++W++         + +g +v++s  + +  +++++g++dG++ 
  KHJ32667.1 281 GDPKWTFapderitldRAHGsDVVRSFCYFDehRIIFTGGEDGKVK 326
                 88999999999998885555699999977662467********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2534.91
//
Query:       KHJ32668.1  [L=826]
Description: putative ubiquitin-protein ligase sel1 ubx2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.3e-35  119.1  32.8    2.4e-05   24.9   0.1   12.4 13  Sel1            Sel1 repeat
  ------ inclusion threshold ------
      0.015   15.3   1.1        6.5    7.0   0.2    4.5  3  TPR_7           Tetratricopeptide repeat
      0.026   14.6   0.0       0.05   13.7   0.0    1.4  1  Ribonuclease_P  Ribonuclease P
        1.2    9.7   4.1        4.1    8.0   0.2    3.8  4  TPR_19          Tetratricopeptide repeat
        3.6    8.7   7.5         22    6.2   0.1    5.1  6  TPR_14          Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.3   8.3e+03      23      32 ..      72      81 ..      66      81 .. 0.84
   2 ?    2.0   0.0      0.11   3.8e+02      26      38 .]     134     146 ..     111     146 .. 0.79
   3 !   12.3   0.1   6.1e-05      0.22       1      38 []     147     184 ..     147     184 .. 0.89
   4 !   19.3   0.1   3.8e-07    0.0014       1      37 [.     185     221 ..     185     222 .. 0.88
   5 !    8.8   0.0   0.00077       2.8       7      35 ..     229     255 ..     224     260 .. 0.91
   6 !    9.7   0.1   0.00041       1.5       3      30 ..     330     356 ..     329     362 .. 0.89
   7 !   14.7   0.0     1e-05     0.037       4      34 ..     386     414 ..     383     418 .. 0.86
   8 !   24.9   0.1   6.6e-09   2.4e-05       3      37 ..     421     453 ..     419     454 .. 0.92
   9 ?    2.3   0.0     0.082   2.9e+02       2      33 ..     456     484 ..     455     486 .. 0.77
  10 ?    2.6   0.2     0.066   2.4e+02       2      30 ..     491     517 ..     490     522 .. 0.83
  11 ?   -3.3   0.0       4.9   1.8e+04      23      37 ..     595     609 ..     590     610 .. 0.77
  12 !   16.0   0.0   4.1e-06     0.015       3      35 ..     613     643 ..     611     643 .. 0.88
  13 !   20.0   0.4   2.3e-07   0.00083       1      34 [.     648     679 ..     648     682 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.3
        Sel1 23 pekAiewyek 32
                ++kAi ++ek
  KHJ32668.1 72 VKKAINYLEK 81
                679*****98 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.11
        Sel1  26 AiewyekAAeqGd 38 
                 A++++e AA+q++
  KHJ32668.1 134 AVRLLEEAAQQDN 146
                 99*********96 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 6.1e-05
        Sel1   1 aeAmyrLGmfylylnGlg.vpkDpekAi.ewyekAAeqGd 38 
                 ++A y L+  ++ ++G    pk++++A+ ++y++A  +G+
  KHJ32668.1 147 PDAIYILA--EMNFYGNFsHPKNYRQAFtRYYQLASLNGN 184
                 6899****..999****77********9789999888775 PP

  == domain 4  score: 19.3 bits;  conditional E-value: 3.8e-07
        Sel1   1 aeAmyrLGmfylylnGl.g.vpkDpekAiewyekAAeqG 37 
                 ++A+++LG   +y +G  g v++D+ kA+ +   AA ++
  KHJ32668.1 185 SSAQHMLG--FMYSTGIgGaVERDQAKALLYHTFAALND 221
                 79******..777****77************99999776 PP

  == domain 5  score: 8.8 bits;  conditional E-value: 0.00077
        Sel1   7 LGmfylylnGlgvpkDpekAiewyekAAe 35 
                 L+  y y++G gv ++ + A+++y+k A+
  KHJ32668.1 229 LA--YRYHTGIGVAANCDIAVQHYKKVAD 255
                 89..*********************9776 PP

  == domain 6  score: 9.7 bits;  conditional E-value: 0.00041
        Sel1   3 AmyrLGmfylylnGl.gvpkDpekAiewy 30 
                 A + LG   ++++G+ g+p+D ++A  ++
  KHJ32668.1 330 ATFGLG--RIHYDGQkGLPRDLKSAKWYF 356
                 7789**..999****99********9998 PP

  == domain 7  score: 14.7 bits;  conditional E-value: 1e-05
        Sel1   4 myrLGmfylylnGlgvpkDpekAiewyekAA 34 
                 +  LG   ++l G gv++  +kA  w+++  
  KHJ32668.1 386 AGYLG--RMFLRGEGVEQSFDKAQIWFQRGI 414
                 5579*..888******************976 PP

  == domain 8  score: 24.9 bits;  conditional E-value: 6.6e-09
        Sel1   3 AmyrLGmfylylnGlgvpkDpekAiewyekAAeqG 37 
                 +++ +G  +++l+Glg pk+  +A e+++ AA+q+
  KHJ32668.1 421 SQWGMG--LMLLEGLGMPKNTVRATEYFKAAADQD 453
                 8999**..777**********************97 PP

  == domain 9  score: 2.3 bits;  conditional E-value: 0.082
        Sel1   2 eAmyrLG.mfylylnGlgvpkDpekAiewyekA 33 
                  A+  LG +++  +   g+p D+  A +++e+A
  KHJ32668.1 456 PAQVSLGaLYL--DQ--GTPGDILVATRYFELA 484
                 68888993333..44..48************98 PP

  == domain 10  score: 2.6 bits;  conditional E-value: 0.066
        Sel1   2 eAmyrLGmfylylnGlgvpkDpekAiewy 30 
                 eA+y L+  +l   G g +++  +A  +y
  KHJ32668.1 491 EAYYFLA--ELINQGIGRDRNCGLASMYY 517
                 8******..999***99888877775555 PP

  == domain 11  score: -3.3 bits;  conditional E-value: 4.9
        Sel1  23 pekAiewyekAAeqG 37 
                   +A+ ++ ++ +q 
  KHJ32668.1 595 GALALLYWTRSSKQS 609
                 567899999998885 PP

  == domain 12  score: 16.0 bits;  conditional E-value: 4.1e-06
        Sel1   3 AmyrLGmfylylnGlgvpkDpekAiewyekAAe 35 
                 ++ ++G +y  ++G g+p+D ekA  +y  A+e
  KHJ32668.1 613 SLVKMGDYY--FKGIGTPADMEKAASCYTAACE 643
                 6779**555..*****************99986 PP

  == domain 13  score: 20.0 bits;  conditional E-value: 2.3e-07
        Sel1   1 aeAmyrLGmfylylnGlgvpkDpekAiewyekAA 34 
                 a A+++L+   +++nG g+++D ++A ++y +A 
  KHJ32668.1 648 AMALFNLA--WMHENGAGLDQDFHLAKRYYDLAL 679
                 579*****..********************9986 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.88   3.1e+03      16      24 ..      73      81 ..      70      90 .. 0.81
   2 ?    2.8   0.0     0.041   1.5e+02      14      24 ..     630     640 ..     614     647 .. 0.90
   3 ?    7.0   0.2    0.0018       6.5       1      30 [.     650     683 ..     650     688 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.88
       TPR_7 16 eeAielyeq 24
                ++Ai ++e+
  KHJ32668.1 73 KKAINYLEK 81
                79*****98 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.041
       TPR_7  14 dyeeAielyeq 24 
                 d+e+A+++y++
  KHJ32668.1 630 DMEKAASCYTA 640
                 89*******98 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0018
       TPR_7   1 aLlnLarlysr....lGdyeeAielyeqsLaltk 30 
                 aL+nLa ++++    ++d+  A ++y  +L++ +
  KHJ32668.1 650 ALFNLAWMHENgaglDQDFHLAKRYYDLALETND 683
                 79**************************777654 PP

>> Ribonuclease_P  Ribonuclease P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.4e-05      0.05      21      91 ..     169     238 ..     154     258 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.4e-05
  Ribonuclease_P  21 krvaskdlvlyalknsleksslrlGlsvskkvgkAvvRNrikRllReafrlnkdelpagldlvviakkgaa 91 
                     +++++++  l  l+  +++++  lG+  s  +g Av+R + k ll ++f+++ d++++++ l  + + g+ 
      KHJ32668.1 169 RQAFTRYYQLASLN-GNSSAQHMLGFMYSTGIGGAVERDQAKALLYHTFAALNDNVRSEMTLAYRYHTGIG 238
                     44445555555555.33444569*********************************998887777776665 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       0.9   3.2e+03      39      59 ..      70      90 ..      66      94 .. 0.59
   2 ?    8.0   0.2    0.0012       4.1       5      33 ..     129     155 ..     127     157 .. 0.86
   3 ?   -1.4   0.1      0.95   3.4e+03       8      39 ..     440     469 ..     437     473 .. 0.77
   4 ?   -2.0   0.0       1.5   5.3e+03       7      34 ..     471     499 ..     465     499 .. 0.61

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.9
      TPR_19 39 gqldeAealLdalpeedpdda 59
                 q+++A++ L+++ ++ p+++
  KHJ32668.1 70 EQVKKAINYLEKYNRHSPQTP 90
                455666666666666555544 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0012
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAe 33 
                 g++ +A++lle+a q+  +n++a + LAe
  KHJ32668.1 129 GQLGDAVRLLEEAAQQ--DNPDAIYILAE 155
                 89**********9766..78888888886 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.95
      TPR_19   8 aeAlalleqalqedpknaearllLAeallalg 39 
                  +A +++++a  +d + a a+  L  ++l +g
  KHJ32668.1 440 VRATEYFKAA--ADQDFAPAQVSLGALYLDQG 469
                 5788889997..66688888888888888887 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 1.5
      TPR_19   7 yaeAlalleqa.lqedpknaearllLAea 34 
                 + + l + ++  l+e  +n+ea + LAe+
  KHJ32668.1 471 PGDILVATRYFeLAERYGNLEAYYFLAEL 499
                 55554444442256777899999999985 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.33   1.2e+03      15      35 ..      70      90 ..      65      91 .. 0.86
   2 ?    6.2   0.1    0.0062        22      15      34 ..     129     149 ..     126     156 .. 0.77
   3 ?   -3.3   0.0         5   1.8e+04      22      29 ..     310     317 ..     303     331 .. 0.58
   4 ?    0.4   0.3      0.44   1.6e+03       4      44 .]     458     499 ..     455     499 .. 0.75
   5 ?   -2.6   0.0       4.1   1.5e+04      18      42 ..     632     655 ..     629     657 .. 0.78
   6 ?   -1.7   0.1       2.1   7.6e+03      15      31 ..     666     682 ..     648     687 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.33
      TPR_14 15 GdpdeAiallrralalaPdda 35
                ++ ++Ai++l+++ ++ P+ +
  KHJ32668.1 70 EQVKKAINYLEKYNRHSPQTP 90
                6889*********99999865 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0062
      TPR_14  15 GdpdeAiallrralal.aPdd 34 
                 G++ +A++ll++a ++ +Pd 
  KHJ32668.1 129 GQLGDAVRLLEEAAQQdNPDA 149
                 899**********88635665 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 5
      TPR_14  22 allrrala 29 
                 a+l+++l+
  KHJ32668.1 310 AALDDVLE 317
                 55555443 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.44
      TPR_14   4 llalaeallalGdpde...AiallrralalaPddaeawlllaql 44 
                 +  l++++l +G p +   A ++++ a +++  ++ea+++la+l
  KHJ32668.1 458 QVSLGALYLDQGTPGDilvATRYFELA-ERYG-NLEAYYFLAEL 499
                 566889999999998888888888888.4454.48888888875 PP

  == domain 5  score: -2.6 bits;  conditional E-value: 4.1
      TPR_14  18 deAiallrralalaPddaeawllla 42 
                 ++A+ ++ +a++ + ++a a++ la
  KHJ32668.1 632 EKAASCYTAACE-YKKSAMALFNLA 655
                 678888888888.888888888887 PP

  == domain 6  score: -1.7 bits;  conditional E-value: 2.1
      TPR_14  15 GdpdeAiallrralala 31 
                 +d+  A ++++ al+++
  KHJ32668.1 666 QDFHLAKRYYDLALETN 682
                 57888999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (826 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 5466.04
//
Query:       KHJ32669.1  [L=401]
Description: putative histone acetyltransferase gcn5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-24   86.3   0.9    2.3e-24   85.2   0.9    1.5  1  Bromodomain      Bromodomain
      3e-08   33.9   0.1    6.5e-08   32.8   0.0    1.7  2  Acetyltransf_1   Acetyltransferase (GNAT) family
      2e-07   31.0   0.5    9.3e-07   28.8   0.2    2.1  2  Acetyltransf_10  Acetyltransferase (GNAT) domain
    0.00011   22.5   0.3    0.00067   20.0   0.1    2.1  2  Acetyltransf_7   Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
       0.17   11.8   0.0       0.36   10.8   0.0    1.5  1  FR47             FR47-like protein


Domain annotation for each model (and alignments):
>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2   0.9   6.5e-28   2.3e-24       3      84 .]     300     381 ..     298     381 .. 0.97

  Alignments for each domain:
  == domain 1  score: 85.2 bits;  conditional E-value: 6.5e-28
                  HHHHHBHTTTCGGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHHHHH CS
  Bromodomain   3 kilsellehklaepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviyelaek 84 
                  ++l++l +h++a pFl pv+++e+ dyy+vik+P+d+st++ kle  +Y+s+++f  d+kl+fsN+rkyn+e+++++++a+k
   KHJ32669.1 300 HLLNDLQNHNSAWPFLNPVNRDEVADYYEVIKEPMDFSTMEIKLEADNYSSPEEFVRDAKLIFSNCRKYNNETTPYAKCANK 381
                  6899***************************************************************************986 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.0   1.8e-11   6.5e-08      38     117 .]     110     185 ..      55     185 .. 0.85
   2 ?   -3.9   0.0       4.4   1.6e+04      61      83 ..     206     228 ..     197     232 .. 0.69

  Alignments for each domain:
  == domain 1  score: 32.8 bits;  conditional E-value: 1.8e-11
                     EEETTEEEEEEEEEEEETTSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHT.TESEE.EEEEETTEHHHHHHHHHTTE CS
  Acetyltransf_1  38 aeedgeliGfisllkipdekggvayieslaVspeyrgkGlGsaLlealeeraree.gikki.vlaveedndaairlYeklGF 117
                     +++  e++G i++++     ++ a+i ++a+s++ + kG+G +L+ +l ++++    +  + +l + +dn  ai++++k GF
      KHJ32669.1 110 VKKPLEVVGGITYRPFKG--RKFAEIVFCAISSDQQVKGYGAHLMSHLKDYVKATsDV--MhFL-TYADN-YAIGYFKKQGF 185
                     4555679****9999999..9**********************************666..5356.66777.******88**9 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 4.4
                     EEEEEEEESGGGTTSSHHHHHHH CS
  Acetyltransf_1  61 ayieslaVspeyrgkGlGsaLle 83 
                     + i ++   p  r   +G++Ll+
      KHJ32669.1 206 GTIMQCSMLPRVRYLEIGRMLLK 228
                     55666666777777888999887 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.2   2.6e-10   9.3e-07      30     109 ..     104     188 ..      77     201 .. 0.81
   2 ?   -0.1   0.0      0.24   8.5e+02      42      78 ..     196     232 ..     188     247 .. 0.81

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 2.6e-10
  Acetyltransf_10  30 ealllvaeeggkivGvielrdgs.....hisllfVdpeyrgqGigkaLleaveeeaekdgikl.eltvnaspyavpfYeklGFkav 109
                      +  + ++++  ++vG i++r  +     +i  ++++++++ +G+g+ L+ ++++++ k+ + + ++   a++ya+++++k+GF++ 
       KHJ32669.1 104 HLSMAIVKKPLEVVGGITYRPFKgrkfaEIVFCAISSDQQVKGYGAHLMSHLKDYV-KATSDVmHFLTYADNYAIGYFKKQGFTKE 188
                      45555566667888999776555677889**************************9.6667778*******************875 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.24
  Acetyltransf_10  42 ivGvielrdgshisllfVdpeyrgqGigkaLleavee 78 
                       +G+i+ ++g+ i  +   p  r   ig++Ll++ e+
       KHJ32669.1 196 WMGYIKDYEGGTIMQCSMLPRVRYLEIGRMLLKQKEA 232
                      5688877888899999999999999*******98665 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.1   1.9e-07   0.00067      13      75 ..     115     186 ..      98     187 .. 0.73
   2 ?   -0.2   0.0      0.39   1.4e+03      34      50 ..     215     231 ..     195     252 .. 0.68

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 1.9e-07
                     EEEEEEEEEEES....TCTEEEEE-GGGTTSSHHHHHHHH....TTSEEE.....EE.EEEETHHHHHHHHHHTTEE CS
  Acetyltransf_7  13 kivGfialslld....aeitrlaVdpeyrgkGiGraLlea....aekgii.....le.qlelnaekaikfYeklGFe 75 
                     ++vG i + + +    aei + a++ + + kG+G  L+ +    +    +     ++  ++ ++ +ai++++k GF+
      KHJ32669.1 115 EVVGGITYRPFKgrkfAEIVFCAISSDQQVKGYGAHLMSHlkdyV----KatsdvMHfLTYADN-YAIGYFKKQGFT 186
                     56888888888888878888899****************844331....122332343334444.9**********8 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.39
                     GGGTTSSHHHHHHHHTT CS
  Acetyltransf_7  34 peyrgkGiGraLleaae 50 
                     p  r   iGr Ll+ +e
      KHJ32669.1 215 PRVRYLEIGRMLLKQKE 231
                     56666779*****9622 PP

>> FR47  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0    0.0001      0.36      22      85 ..     131     196 ..     124     197 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.0001
                 SSEEEEEE-GGG-SSSHHHHHHHHHHHHHHHS-S-EEEEEETT-HHHHHHHHHHT-EEE...EEEEE CS
        FR47  22 gelgalqvlpehrrrGlgsrlvkalakeiaergktvllvvvasNtpsirlyeklGfeki...eetew 85 
                  e+    +  + + +G+g  l + l   +  +  +v+     +++ +i  ++k Gf+k    e+++w
  KHJ32669.1 131 AEIVFCAISSDQQVKGYGAHLMSHLKDYVK-ATSDVMHFLTYADNYAIGYFKKQGFTKEitlEKSVW 196
                 56677778889999**********977765.566777788888889***********9855555665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       648  (0.0361426); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 2923.20
//
Query:       KHJ32670.1  [L=1620]
Description: putative vacuolar assembly sorting protein vps8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      8e-70  234.4   0.5    2.4e-68  229.6   0.1    2.5  2  Vps8          Golgi CORVET complex core vacuolar protein 8
    1.8e-09   37.6   4.2    0.00012   22.0   0.1    3.8  3  Clathrin      Region in Clathrin and VPS
    0.00086   19.2   0.0      0.002   18.0   0.0    1.6  1  zf-RING_5     zinc-RING finger domain
     0.0049   16.9   0.1     0.0049   16.9   0.1    2.1  2  zf-RING_UBOX  RING-type zinc-finger
  ------ inclusion threshold ------
      0.022   15.1   0.0      0.064   13.6   0.0    1.8  1  zf-RING_2     Ring finger domain
      0.038   13.7   0.1       0.13   12.0   0.1    2.0  1  zf-RING_11    RING-like zinc finger
      0.067   13.5   0.0       0.17   12.2   0.0    1.7  1  zf-rbx1       RING-H2 zinc finger domain
      0.082   12.8   0.0       0.91    9.5   0.0    2.5  2  Tudor_FRX1    Fragile X mental retardation Tudor domain
      0.096   12.7   0.0       0.55   10.3   0.0    2.1  2  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
       0.15   11.7   0.1       0.47   10.1   0.1    1.8  1  Zn_ribbon_17  Zinc-ribbon, C4HC2 type


Domain annotation for each model (and alignments):
>> Vps8  Golgi CORVET complex core vacuolar protein 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  229.6   0.1   1.3e-71   2.4e-68       1     198 []     725     922 ..     725     922 .. 0.98
   2 ?    2.4   0.0     0.055        98      36      94 ..    1184    1241 ..    1167    1307 .. 0.78

  Alignments for each domain:
  == domain 1  score: 229.6 bits;  conditional E-value: 1.3e-71
        Vps8   1 vFlevLepyilsgklkslppevvkalvehysskgelerleelilhldpksLDldqvlklckehrLydaliYvwnkaldDYvtPlvellklirsaeeeee 99 
                 +Fl++Le+ il+++++ +p  +vk+lv  ++ +g  +rle++i+h+dp sLD+dq+++lck+h+LydaliYvwn+al+DY+tPl+e+l+l+ + ++e++
  KHJ32670.1 725 IFLKALETQILEKRITVIPTAIVKNLVIDFVIQGLDTRLEDIICHIDPLSLDIDQITTLCKQHSLYDALIYVWNRALHDYITPLIEILSLLIK-SSENN 822
                 7*****************************************************************************************999.67888 PP

        Vps8 100 ekeeeeeeeeeaykvfeYlsyiLtGraYPsgeeleeeeaskakseiyslLfsgksiewpkgsgk.lltkeeseeepafPylrlLLkfdaeeflsvLnea 197
                 + +  + ++++a k+f+Yls+++tGr YP+ge l+e++a  ak+++y++Lfsgk+++wpk sg+ +lt++++e+ep+fPylr++L+fda++fl v+nea
  KHJ32670.1 823 DYRIGDPSASQASKIFPYLSFTFTGRIYPTGELLSEQDALLAKADLYWFLFSGKTVNWPKISGNpFLTQPSQEQEPTFPYLRMILRFDAPSFLGVMNEA 921
                 8999999********************************************************99********************************** PP

        Vps8 198 F 198
                 F
  KHJ32670.1 922 F 922
                 9 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.055
        Vps8   36 lerleelilhldpksLDldqvlklckehrLydaliYvwnkaldDYvtPlvellklirsa 94  
                  ++++ + + +  ++ L+ld vl  ++e +  +a+i +++k  + ++  +  l++ ++++
  KHJ32670.1 1184 PSKVASFVENFQISDLNLDEVLPYMEESGVIEAVIILMTK-DGQFKQAMSRLIRHFKKL 1241
                  567788888999***********************99765.466888888888777776 PP

>> Clathrin  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.2   2.2e-05     0.039      12      97 ..     712     803 ..     707     824 .. 0.81
   2 ?   -0.1   0.0      0.43   7.7e+02      70     105 ..    1033    1069 ..    1006    1076 .. 0.79
   3 !   22.0   0.1   6.8e-08   0.00012      16     126 ..    1139    1255 ..    1129    1273 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.2e-05
                 CCHHHHHCTT-HHHHCHHHCCHHHCHTS...--HHHHHHHHHHHHHTT-HHHHHHTTSS---..S-TTHHHHHHHT-SSHHHHHHHHHT..TX CS
    Clathrin  12 rvvklfeeaglleelleyLekvlkedsk...enpalqtallelyakyddpqeleeflkknnn..ydlekvaklcekadlyeeavilykk..in 97 
                 +v + +e++g+    l+ Le  ++e++     + ++ +++++  ++  d ++le+++   +    d++++  lc+++ ly+ +++++++  ++
  KHJ32670.1 712 EVYEWYENRGSRGIFLKALETQILEKRItviPTAIVKNLVIDFVIQGLD-TRLEDIICHIDPlsLDIDQITTLCKQHSLYDALIYVWNRalHD 803
                 6677777777777777777777765544677789**************9.********888777**********************9986444 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.43
                  -.S-TTHHHHHHHT-SSHHHHHHHHHTTXTHSSHSSX CS
    Clathrin   70 n.ydlekvaklcekadlyeeavilykkinefkkaisl 105 
                  +  d ++++ l  + + y+ ++i+yk  ++++k++++
  KHJ32670.1 1033 HpSDMPQLLPLFHQVGFYRVLKIIYKSEKQYAKLLEI 1069
                  3368888888888999999999999999999999987 PP

  == domain 3  score: 22.0 bits;  conditional E-value: 6.8e-08
                  HHHCTT-HHHHCHHHCCHHHCHTS...--HHHH...HHHHHHHHHTT-HHHHHHTTSS---..S-TTHHHHHHHT-SSHHHHHHHHHTTXTHSSHSS CS
    Clathrin   16 lfeeaglleelleyLekvlkedsk...enpalq...tallelyakyddpqeleeflkknnn..ydlekvaklcekadlyeeavilykkinefkkais 104 
                  ++++  +l++ + yL+ + ++ s+   ++ +lq     +++l++k d+ +++ +f+++++    +l++v+ + e+ + +e  +il +k ++fk+a+s
  KHJ32670.1 1139 ALSH--NLQLKYIYLRTIYEHESRnqeQSGILQrflGTYIQLMCKFDP-SKVASFVENFQIsdLNLDEVLPYMEESGVIEAVIILMTKDGQFKQAMS 1232
                  5544..6666666777777555444433333331114689999999*6.********887777********************************** PP

                  .XSSSSHCSCHHHHTTTTTXXSH CS
    Clathrin  105 .llkklkdfddaieyaakvsnpe 126 
                   l+++ k ++ ai  ++ +s +e
  KHJ32670.1 1233 rLIRHFKKLEGAIFCIISSSTEE 1255
                  77999999999997777777665 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   1.1e-06     0.002       6      41 ..    1566    1617 ..    1563    1619 .. 0.88

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 1.1e-06
   zf-RING_5    6 fekl..skeekfyltsCgHifCekClkkll..............ekeavCpi 41  
                  f+k+  ++  + ++++C Hi++++Cl k +              e+e++Cp+
  KHJ32670.1 1566 FNKYqgRDIGPLVVLACRHIYHQSCLEKIQgqdndstttalyleEREFKCPV 1617
                  556666677789******************9************99*****98 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.3       4.8   8.7e+03       2      16 ..     436     448 ..     436     449 .. 0.72
   2 !   16.9   0.1   2.7e-06    0.0049      10      39 .]    1575    1616 ..    1563    1616 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 4.8
  zf-RING_UBOX   2 pIClelftdPlvlpC 16 
                   p Cl+++ +P + +C
    KHJ32670.1 436 PKCLDTY-TP-LSGC 448
                   56*****.77.4467 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 2.7e-06
  zf-RING_UBOX   10 dP.lvlpCGHtFCreCl.....w......elskslegafkCP 39  
                     P +vl C H+++++Cl     +      +    +e++fkCP
    KHJ32670.1 1575 GPlVVLACRHIYHQSCLekiqgQdndsttTALYLEEREFKCP 1616
                    5744479**********988662666778999999******9 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   3.6e-05     0.064      16      42 ..    1577    1617 ..    1567    1619 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.6e-05
   zf-RING_2   16 vlllpCgHvfhreClerwlrssst..............CPl 42  
                  +++l C+H++h++Cle++  + +               CP+
  KHJ32670.1 1577 LVVLACRHIYHQSCLEKIQGQDNDstttalyleerefkCPV 1617
                  45668**********99744333334456666666667776 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   7.5e-05      0.13      15      29 .]    1577    1591 ..    1569    1591 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 7.5e-05
  zf-RING_11   15 lfilpCsHtFHfkCI 29  
                  l++l C H++H+ C+
  KHJ32670.1 1577 LVVLACRHIYHQSCL 1591
                  7899**********5 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   9.6e-05      0.17      19      47 ..    1569    1597 ..    1556    1619 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 9.6e-05
     zf-rbx1   19 apgdeecpvvlGeCgHaFHlhCiskWlkt 47  
                  ++g++  p+v+ +C+H +H+ C++k   +
  KHJ32670.1 1569 YQGRDIGPLVVLACRHIYHQSCLEKIQGQ 1597
                  455555678888***********986655 PP

>> Tudor_FRX1  Fragile X mental retardation Tudor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00051      0.91       4      27 ..     718     741 ..     716     743 .. 0.94
   2 ?   -0.3   0.1      0.59   1.1e+03      31      47 ..    1339    1355 ..    1337    1356 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00051
  Tudor_FRX1   4 EVrGsnGafykafvkdvhedsltv 27 
                 E rGs G f+ka+ + ++e+ +tv
  KHJ32670.1 718 ENRGSRGIFLKALETQILEKRITV 741
                 77********************99 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.59
  Tudor_FRX1   31 nnWqperqvpfndvRlP 47  
                  nnW ++r + +++ R P
  KHJ32670.1 1339 NNWENQRDFVITKLRAP 1355
                  9************9988 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.6   2.8e+03      37      62 ..     633     658 ..     625     666 .. 0.85
   2 ?   10.3   0.0   0.00031      0.55      32      67 ..    1561    1597 ..    1545    1613 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.6
                 TCSTTTTTS-EEEBTTS-EEEHHHHH CS
  zf-ANAPC11  37 sckfpGddcplvlGkckhnfhlhcil 62 
                 +c + Gd  +l++G  + +   h +l
  KHJ32670.1 633 TCYYTGDTDNLIIGLPDDSSSRHSLL 658
                 79************988887777765 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00031
                  TS--TTCSTTTTT.S-EEEBTTS-EEEHHHHHHHHHH CS
  zf-ANAPC11   32 dGtcpsckfpGdd.cplvlGkckhnfhlhcilkwlet 67  
                  +G  p  k+ G d  plv+  c+h++h+ c+ k   +
  KHJ32670.1 1561 NGKKPFNKYQGRDiGPLVVLACRHIYHQSCLEKIQGQ 1597
                  6788889999965269**************9986544 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00026      0.47      22      41 ..    1580    1599 ..    1576    1604 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00026
  Zn_ribbon_17   22 gvCeHvlHasCarewfendd 41  
                     +C H+ H+sC+++   +d+
    KHJ32670.1 1580 LACRHIYHQSCLEKIQGQDN 1599
                    68**********98766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1620 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       717  (0.0399911); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.01u 0.30s 00:00:01.31 Elapsed: 00:00:00.50
# Mc/sec: 9722.89
//
Query:       KHJ32671.1  [L=277]
Description: putative frg1-like family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.2e-51  172.6   0.1    1.1e-50  172.0   0.1    1.3  1  FRG1      FRG1-like domain
    0.00024   21.3   0.0     0.0086   16.3   0.0    2.5  2  Fascin    Fascin domain


Domain annotation for each model (and alignments):
>> FRG1  FRG1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.0   0.1   1.3e-54   1.1e-50       2     191 .]      88     276 ..      87     276 .. 0.97

  Alignments for each domain:
  == domain 1  score: 172.0 bits;  conditional E-value: 1.3e-54
        FRG1   2 sylealdeGdftigePhdegegPdPeevftavkvasdekislKsgyGkYlgvdkegilsaraeAisseEqfevvfeegktallal..aketflsvdeek 98 
                 s +e++++ ++ ++ePh++      ++v++a++va +e +slK+++GkYlg+dk gils  aeA+s+ E+f +++  ++++ + l   +etfl++++  
  KHJ32671.1  88 STVENIIDNNPATAEPHEV------RQVWVASRVAFTETFSLKGHNGKYLGCDKFGILSCCAEAVSPLESFLIIPTLDTPGTFQLqtLRETFLTIKP-- 178
                 89*****************......*****************************************************99999886679********.. PP

        FRG1  99 divakskkaaeeevveiRsdaer.egktkdrirvedreklrekeskyvkkfqkiqdkkl......rldkedvkrlkkarkeGnlhEvlLDrrvkmksDk 190
                   +++++ a+++   eiR+d ++ +++t++r r+++r+k++ k+sk+ k+++ki++k++      r ++++vkrlkkar+eGn+hE+lL ++ k k+Dk
  KHJ32671.1 179 --CTANSSAKSNSSYEIRGDSQEiTFNTTFRLRMQARFKPKYKASKQEKAREKISRKEIeeaigrRPNDDEVKRLKKARREGNYHETLLLVKIKNKHDK 275
                 ..7788889***********999899************************************************************************* PP

        FRG1 191 y 191
                 y
  KHJ32671.1 276 Y 276
                 9 PP

>> Fascin  Fascin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.02   1.8e+02      39      59 ..      68      88 ..      57      95 .. 0.83
   2 !   16.3   0.0   9.6e-07    0.0086      25      89 ..     108     175 ..      96     193 .. 0.72

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.02
                EEEETTSEEEEE-TTSBEEEE CS
      Fascin 39 aLrshngkYlsldkdGrvvae 59
                 L s  + +l++d++G+v  +
  KHJ32671.1 68 ILPSEPSSFLACDSNGKVFTS 88
                56677889*********9865 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 9.6e-07
                 GEEEEEEETTSEEEEEEETTSEEEEE-TTSBEEEEESS--GGGEEEEEEE...TCEEEEEETTSCEEE CS
      Fascin  25 qlftLefdeesyavaLrshngkYlsldkdGrvvaeaetkeedtlFelefr...grwallresngryLg 89 
                 q++  +    + +  L+ hngkYl +dk G + + ae  ++   F +  +    +   l+  +  +L+
  KHJ32671.1 108 QVWVASRVAFTETFSLKGHNGKYLGCDKFGILSCCAEAVSPLESFLIIPTldtPGTFQLQTLRETFLT 175
                 566555444477788*******************9999998888888776655444444455555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       704  (0.039266); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1982.13
//
Query:       KHJ32672.1  [L=333]
Description: putative cell cycle checkpoint protein rad1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-80  269.0   1.0    4.1e-80  268.8   1.0    1.0  1  Rad1      Repair protein Rad1/Rec1/Rad17


Domain annotation for each model (and alignments):
>> Rad1  Repair protein Rad1/Rec1/Rad17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  268.8   1.0   2.3e-84   4.1e-80       1     275 []      13     296 ..      13     296 .. 0.95

  Alignments for each domain:
  == domain 1  score: 268.8 bits;  conditional E-value: 2.3e-84
        Rad1   1 vfsAtlsnvseLatlLksiafkdkalvqissdGlkfivednrvlqaqafldkalFtsYtfenaqdd.edeedeeedsvsfevsLsallecLnifgknds 98 
                 +f +++s+ + L +lL++i f+ ka+vqis++G++f+ve++rv+q+ +fldkalFt+++ + ++   +++e  ++d +sf++sL a+le+++i g++ds
  KHJ32672.1  13 IFKSVTSSTKPLFQLLNCIRFAPKAHVQISDEGIRFVVEEARVMQGIVFLDKALFTTFSCNLPEFYdYETEGLSQDVPSFQISLPAFLETIQILGTADS 111
                 6999********************************************************8777534888889************************** PP

        Rad1  99 sskessssraskv............asssakatscklsYkgeGsPLvliLeeagvtttcelsTyepeedldleldrqevvlkvilkselLhsalteLda 185
                 + ++ s+s+++ +            ++++  +  c+lsY+ +GsPL +iLee+gv+ttc l+Tye+e++ +++++r+++++k+i+++ +L++ ++eL++
  KHJ32672.1 112 TISRFSKSENELYsnirlgrtnafsNHALGISGVCRLSYQSYGSPLCIILEESGVVTTCHLNTYEAEFSEEIPFQRDAMQVKIIMQARWLFDTISELSS 210
                 998776666655599********9888999999****************************************************************** PP

        Rad1 186 t.skklkilassekkapvfalsakgelgssevefpneksvlekfevsslsessessYkfallkkaakalalssKvslrmdeaGlLslqfmi 275
                 + s++l i+a ++  +p++++sa+g+lgs++v+f+n +++le+f v   ++ s+s Yk++++k   +a++l+sKvs+r de+G+Lslqfm+
  KHJ32672.1 211 SsSNRLDITAYPT--SPYLSFSATGPLGSTSVDFSNGRDLLETFTVA--DKWSQS-YKVEMIKTSIEAMKLASKVSIRGDEQGVLSLQFMV 296
                 *9**********5..9*******************************..888888.**********************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2542.70
//
Query:       KHJ32673.1  [L=219]
Description: putative glutathione peroxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-37  126.9   0.2      3e-37  126.5   0.2    1.1  1  GSHPx     Glutathione peroxidase
    0.00016   21.5   0.2    0.00051   20.0   0.1    1.9  2  AhpC-TSA  AhpC/TSA family
     0.0053   16.5   1.5      0.012   15.3   0.1    2.0  2  Redoxin   Redoxin


Domain annotation for each model (and alignments):
>> GSHPx  Glutathione peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.5   0.2   5.1e-41     3e-37       1     107 [.      59     168 ..      59     169 .. 0.95

  Alignments for each domain:
  == domain 1  score: 126.5 bits;  conditional E-value: 5.1e-41
                 GGGBEEEBTTSSEEEGGGGTTSEEEEEEEESSSTTHHHHHHHHHHHHHH...GGGTEEEEEEEE-TTTT---S-GGGHHHTSSHTTT-SSEEB--BBSS CS
       GSHPx   1 iyelsakdidgekvkleklrgkvvlivnvaskCglteqykeleelqkry...kdkglvilgfPCnqfgkqepgsdeeikkfrqgkyevtfellekievn 96 
                 +y++++ d +g++ +l+++++kvvl+vn askCg+t+q + le+l++     ++  +vilgfPCnqfg q+pgs+eei+ f+  ky+vtf++l k+ev 
  KHJ32673.1  59 FYDFQVSDAKGQPQSLSQYKDKVVLVVNTASKCGFTPQLQGLEKLYESVnkaHPDKFVILGFPCNQFGSQDPGSNEEIQDFCRAKYNVTFPVLGKVEVK 157
                 7*********************************************8661115689******************************************* PP

                 STTB-HHHHHH CS
       GSHPx  97 Gekedplykfl 107
                 G++++pl+k+l
  KHJ32673.1 158 GDNAEPLFKWL 168
                 **********9 PP

>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.1   8.5e-08   0.00051       5      58 ..      59     110 ..      56     158 .. 0.70
   2 ?   -3.5   0.0       1.6   9.5e+03      56      78 ..     181     202 ..     179     205 .. 0.66

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 8.5e-08
                 ----EEESTTCEEEECHHHTTSEEEEEEESTST-CCHHHHHHHHHHCHHHCCCT CS
    AhpC-TSA   5 apdfelknadgetvslsdykgkpvvlffypkdwcpvCttelpalaklyeefker 58 
                 + df++ +a+g++ sls+yk+k+v+++ +++  c ++  +l+ l+klye   ++
  KHJ32673.1  59 FYDFQVSDAKGQPQSLSQYKDKVVLVVNTAS-KCGFT-PQLQGLEKLYESVNKA 110
                 679******************6666666666.88776.7899999999988765 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.6
                 CCTTEEEEEEESSSCHHHHHHHH CS
    AhpC-TSA  56 kergvevigvsvdspeshkkfie 78 
                  + ++e + +s d ++ +k+++ 
  KHJ32673.1 181 VKWNFEKWLISKDGKA-VKRWAS 202
                 5566777777777776.777765 PP

>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2      0.12     7e+02      36      47 ..       2      13 ..       1      21 [. 0.84
   2 !   15.3   0.1   2.1e-06     0.012       5      88 ..      58     149 ..      54     152 .. 0.68

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.12
                ESTTT-HHHHHT CS
     Redoxin 36 vpgafcPtCsae 47
                vp+  +PtC+  
  KHJ32673.1  2 VPRMMTPTCTLG 13
                79999****975 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 2.1e-06
                 BB---ECCEETTCEEEEEHHHHTTSEEEEEEESTTT-HHHHHTHHHHHTH.HHHHHCSTTTEEEEEESSSHH..........HHHHHHH.TT-TSE CS
     Redoxin   5 kaPdftlplaatdgnsvslsefkgkkvvvnfvpgafcPtCsaehpylekl.aellkekgvdvvavvadndaf..........vkefwgk.eglkfp 88 
                 ++ df+  +   +g++ sls++k+k+v+v+  ++  c+  ++++  lekl +   k++ +++v++    ++f           ++f+ + ++++fp
  KHJ32673.1  58 SFYDFQVSD--AKGQPQSLSQYKDKVVLVVNTAS-KCGF-TPQLQGLEKLyESVNKAHPDKFVILGFPCNQFgsqdpgsneeIQDFCRAkYNVTFP 149
                 566888755..9**************99999999.9997.78899999994444566667777775555555444444344455555444555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       353  (0.0196888); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1582.26
//
Query:       KHJ32674.1  [L=319]
Description: putative pyridoxine biosynthesis protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   5.6e-110  366.0   5.9   8.5e-110  365.4   5.9    1.3  1  SOR_SNZ       SOR/SNZ family
      2e-08   33.9   6.6    1.6e-06   27.6   0.4    2.4  2  ThiG          Thiazole biosynthesis protein ThiG
     0.0021   17.6   0.6      0.028   13.9   0.1    2.3  2  His_biosynth  Histidine biosynthesis protein
     0.0056   15.8   0.3       0.41    9.7   0.0    2.4  2  Dus           Dihydrouridine synthase (Dus)
  ------ inclusion threshold ------
      0.011   15.8   0.0      0.026   14.6   0.0    1.6  1  TetR_C_27     Tetracyclin repressor-like, C-terminal domain
      0.016   14.4   0.2       0.22   10.7   0.0    2.4  2  NanE          Putative N-acetylmannosamine-6-phosphate epimer
       0.12   11.5   0.0        1.9    7.6   0.0    2.3  2  IGPS          Indole-3-glycerol phosphate synthase


Domain annotation for each model (and alignments):
>> SOR_SNZ  SOR/SNZ family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  365.4   5.9  3.3e-113  8.5e-110       2     207 .]      32     237 ..      31     237 .. 0.99

  Alignments for each domain:
  == domain 1  score: 365.4 bits;  conditional E-value: 3.3e-113
                 THHHHHHHHTTTSSEEEEESSHHHHHHHHHHT-SEEEE-SS-HHHHHHH-S------HHHHHHHHHH-SS-EEEEEETT-HHHHHHHHHTT-SEEEEET CS
     SOR_SNZ   2 lkvkaglaemlkgGvimdvvnaeqakiaeeaGavavmalervpadirkeggvarmsdpklikeikeavsipvmakvriGhfveaqilealgvdyiDese 100
                 + vk+gla+mlkgGvimdvvna+qa+iaeeaGa+avmalervpadir eggv+rmsdpk+ikei+++v+ipvmak+riGhfve+qilea+gvdyiDese
  KHJ32674.1  32 FGVKTGLARMLKGGVIMDVVNAKQARIAEEAGACAVMALERVPADIRVEGGVSRMSDPKMIKEIMSSVTIPVMAKARIGHFVECQILEAIGVDYIDESE 130
                 569************************************************************************************************ PP

                 TS--S-SS----GGG-SS-EEEEESSHHHHHHHHHHT-SEEEEES-TTS--THHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHGGGHHHHHHHHHTT CS
     SOR_SNZ 101 vltpadeeahidkkkfkvpfvcGarnlgealrriaeGaamirtkGeagtGdvveavrhvrkikeeirklkslseeelvalakelkaplelvkevaelgr 199
                 vltpad+ +h++k++++vpfvcG+r+lgealrri+eGaamirtkGeagtGd+veavrh+r++++ei +++++++ el  +ake++ap+el++e+a+lgr
  KHJ32674.1 131 VLTPADNLHHVEKHDYSVPFVCGCRDLGEALRRISEGAAMIRTKGEAGTGDIVEAVRHMRTVNAEIGRASRMTDAELRVMAKEIQAPYELLRETAKLGR 229
                 *************************************************************************************************** PP

                 S-S---T. CS
     SOR_SNZ 200 lpvvnfaa 207
                 lpvvnfaa
  KHJ32674.1 230 LPVVNFAA 237
                 ******98 PP

>> ThiG  Thiazole biosynthesis protein ThiG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   1.1   0.00032      0.83     136     199 ..      55     124 ..      46     143 .. 0.75
   2 !   27.6   0.4   6.4e-10   1.6e-06     172     225 ..     225     281 ..     184     291 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00032
                 HHHHHHHTT-SEBEEB...SSSTTS----...S-HHHHHHHHHH-SS-BEEES---SHHHHHHHHHTT-S CS
        ThiG 136 larrleevGcaavmPl...aapiGsglGl...lnkealkiiieeakvPvivDAGigspsdaaqamelGad 199
                  ar  ee+G+ avm l    a i    G+   ++++++k i++++++Pv+  A ig+  +      +G+d
  KHJ32674.1  55 QARIAEEAGACAVMALervPADIRVEGGVsrmSDPKMIKEIMSSVTIPVMAKARIGHFVECQILEAIGVD 124
                 3556799*******9733357887777751116789********************98776655556666 PP

  == domain 2  score: 27.6 bits;  conditional E-value: 6.4e-10
                 HH-.SS-BEEES..---SHHHHHHHHHTT-SEEEESHHHHTSSSHHHHHHHHHHHHH CS
        ThiG 172 eea.kvPvivDA..GigspsdaaqamelGadavllntavaeakdpvamArafklave 225
                 +++ ++Pv+  A  G+ +p daa  m+lG+d+v++ + + ++ d  + A+a+ +av+
  KHJ32674.1 225 AKLgRLPVVNFAagGVATPADAALMMQLGCDGVFVGSGIFKSGDALKRAKAIVQAVT 281
                 344578988544449***************************************996 PP

>> His_biosynth  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1     0.047   1.2e+02      70     190 ..      71      99 ..      41     126 .. 0.62
   2 !   13.9   0.1   1.1e-05     0.028      61     144 ..     217     300 ..     171     319 .] 0.73

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.047
                   HH-SSEEEEESSSSSHHHHHHHHHCT-SEEEESHHHHH-THHHHHHHHHHCGGGEEEEEEEEECEEEEETTTTEEEEEEHHHHHHHHHHTT-SEEEE CS
  His_biosynth  70 eevfipvqvGGGIrsledveelleagadkviigtaavknpelikelaekfgsqkivvaiDarrgykvaikgwreetgldavelakkleelgageill 166
                   e+v +++ v GG+++++d +                                                                             
    KHJ32674.1  71 ERVPADIRVEGGVSRMSDPKM---------------------------------------------------------------------------- 91 
                   445555666666665555443............................................................................ PP

                   EETTTTTTSS---HHHHHHHHHHH CS
  His_biosynth 167 tdidrdGtlsGpdleltkelaeav 190
                                   +ke+ ++v
    KHJ32674.1  92 ----------------IKEIMSSV 99 
                   ................33333333 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 1.1e-05
                   HHHHHHHHHHH-SSEE..EEESSSSSHHHHHHHHHCT-SEEEESHHHHH-THHHHHHHHHHCGGGEEEEEEEEE.CEEEEETTTTEE CS
  His_biosynth  61 nldlveeiaeevfipv..qvGGGIrsledveelleagadkviigtaavknpelikelaekfgsqkivvaiDarr.gykvaikgwree 144
                    ++l++e+a+  ++pv     GG+ +  d++ ++++g+d v +g+  +k+ + +k++   +++  ++  iD +    +v  + ++ +
    KHJ32674.1 217 PYELLRETAKLGRLPVvnFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGDALKRAKAIVQA--VTHYIDPKVlA-NVSEDLGEAM 300
                   556677777766666633468899999999999999999999999988888888888776544..77777766532.4555555555 PP

>> Dus  Dihydrouridine synthase (Dus)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.2   0.0    0.0074        19     112     133 ..      90     111 ..      51     124 .. 0.80
   2 !    9.7   0.0   0.00016      0.41     182     218 ..     230     265 ..     188     304 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0074
                 HHHHHHHCCSSS-EEEEEESES CS
         Dus 112 qivkavvkaveiPvtvkirigi 133
                 +++k++ + v iPv +k rig 
  KHJ32674.1  90 KMIKEIMSSVTIPVMAKARIGH 111
                 5788888889999999999985 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00016
                 -SS-EEEESS--SHHHHHHHHHHH--SEEEESCHHCC CS
         Dus 182 vsipviaNGdIkdaedaqaileetGadgvmigrgalg 218
                 ++++ +a G++ ++ da  +++  G+dgv +g g  +
  KHJ32674.1 230 LPVVNFAAGGVATPADAALMMQL-GCDGVFVGSGIFK 265
                 45666899*********999998.********99765 PP

>> TetR_C_27  Tetracyclin repressor-like, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0     1e-05     0.026      61      97 ..     260     296 ..     256     302 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1e-05
                 HCT-STT--HHHHHHHHHHHSGGGTSHHHHHHHGGG- CS
   TetR_C_27  61 aaGeFkaadpeaaaravfdatarfhhPalaaewsdpe 97 
                  +G Fk+ d+ + a+a+++a++++++P ++a+ s++ 
  KHJ32674.1 260 GSGIFKSGDALKRAKAIVQAVTHYIDPKVLANVSEDL 296
                 589***************************9998876 PP

>> NanE  Putative N-acetylmannosamine-6-phosphate epimerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.069   1.8e+02     133     170 ..      88     126 ..      50     146 .. 0.68
   2 ?   10.7   0.0   8.5e-05      0.22     146     180 ..     233     267 ..     208     283 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.069
                 -HHHHHHHHHT.T--EEEES---SHHHHHHHHTT--SEE CS
        NanE 133 Dfalvkalsea.glkviaeGrintPekakkaieiGvdav 170
                 D +++k+++++  + v+a  ri    + +    iGvd +
  KHJ32674.1  88 DPKMIKEIMSSvTIPVMAKARIGHFVECQILEAIGVDYI 126
                 444555543331444555555555555555555555544 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 8.5e-05
                 -EEEES---SHHHHHHHHTT--SEEEE-HHHH-HH CS
        NanE 146 kviaeGrintPekakkaieiGvdavvvGsaitrle 180
                    a G + tP+ a+ ++++G d v vGs i +  
  KHJ32674.1 233 VNFAAGGVATPADAALMMQLGCDGVFVGSGIFKSG 267
                 3568999**********************887654 PP

>> IGPS  Indole-3-glycerol phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.053   1.3e+02      61      88 ..      43      70 ..      41     126 .. 0.76
   2 ?    7.6   0.0   0.00074       1.9     210     250 ..     232     272 ..     210     276 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.053
                TEESBSS--HHHHHHHHTTT.-SEEEEE CS
        IGPS 61 kgliredfdpaeiAkkyeeagAsaiSVL 88
                kg + +d++ a++A+  eeagA a+  L
  KHJ32674.1 43 KGGVIMDVVNAKQARIAEEAGACAVMAL 70
                6888899999999999999999987655 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00074
                 SEEEEESSS-SHHHHHHHCCTT-SEEEESHHHHC-TTHHHH CS
        IGPS 210 vllvaeSGiktredveklkeegvnafLvGeslmrqedveka 250
                 v+  a  G++t++d+  + + g +++ vG+ + ++ d+ k 
  KHJ32674.1 232 VVNFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGDALKR 272
                 6677899*************************999887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2415.47
//
Query:       KHJ32675.1  [L=707]
Description: putative mhyt domain signaling protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-17   61.6   9.5    1.2e-10   41.4   0.7    3.6  3  MHYT      Bacterial signalling protein N terminal repeat
     0.0088   15.9   0.0      0.019   14.9   0.0    1.5  1  DUF2222   Uncharacterised signal transduction histidine kinas


Domain annotation for each model (and alignments):
>> MHYT  Bacterial signalling protein N terminal repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.7   1.4e-14   1.2e-10       1      56 [.       3      63 ..       3      67 .. 0.85
   2 !   19.3   0.9     1e-07   0.00093       2      53 ..      72     122 ..      72     127 .. 0.90
   3 !    4.4   0.0    0.0046        42      20      50 ..     168     198 ..     155     205 .. 0.78

  Alignments for each domain:
  == domain 1  score: 41.4 bits;  conditional E-value: 1.4e-14
        MHYT  1 GlgIwsMHYtGMaAftl....pg.pigydpaltalSlliaivasvlAlalavrrrdtrlrl 56
                G++Iw+MHY+G  A+ l    p+ +i y++++t+lS+++ i++++lA++ +    ++ +r+
  KHJ32675.1  3 GIAIWCMHYIGNQAIILvngqPSdQIKYNLGFTILSFILPITMAFLAFVTVGTDIKSVARV 63
                9****************8887566************************9986555554444 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 1e-07
        MHYT   2 lgIwsMHYtGMaAftlpgpigydpaltalSlliaivasvlAlalavrrrdtr 53 
                 lgI +MHY+G a++t   + +y   +++ ++++++++++++l+ ++  r ++
  KHJ32675.1  72 LGILGMHYMGQAGITN-YQCSYQFIWILGAVILSFISCTAGLSQFFLIRLSW 122
                 79************96.9************************9887777666 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.0046
        MHYT  20 pigydpaltalSlliaivasvlAlalavrrr 50 
                 +ig  + +talS+l +++++++++++ +r +
  KHJ32675.1 168 QIGTVIVITALSILGCLILVGIGIVAQRRKK 198
                 5666788999999999999999997755544 PP

>> DUF2222  Uncharacterised signal transduction histidine kinase domain (DUF2222)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   2.1e-06     0.019      49      70 ..     204     225 ..     190     245 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.1e-06
     DUF2222  49 nselvrsIaiFdaenqlfvtsn 70 
                   +lv ++aiFd++n+++vts 
  KHJ32675.1 204 VQQLVLAVAIFDQNNKILVTST 225
                 4579*****************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (707 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       914  (0.0509789); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 4652.69
//
Query:       KHJ32676.1  [L=189]
Description: hypothetical protein EV44_g3727 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-24   86.2   0.0      3e-24   85.8   0.0    1.2  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.8   0.0   1.6e-28     3e-24       1     206 [.      34     184 ..      34     189 .] 0.96

  Alignments for each domain:
  == domain 1  score: 85.8 bits;  conditional E-value: 1.6e-28
                 EE-TT.S-EEE.......-THHHHCTB--.........-------HHHH.............HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET CS
       RVT_1   1 ipKkgpgsyRp.isllsvdykalnkliakrLkdvlekllsenqpgfrpgrstldavedllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvp 98 
                 i+K+g g+ R  +     dy+aln+  +          + +++p  ++              l+k  ++k+l+klD+  aF++ + ++ ++ +taf+++
  KHJ32676.1  34 IRKPG-GGLRFcV-----DYRALNAKSKA---------DRYPLPLVKET-------------LAKLSESKWLTKLDVGAAFHKLRIKQGDEWKTAFSTR 104
                 89***.*****55.....***********.........***********.............9999********************************* PP

                 .........................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESS.HHHHHHHHHHHHHHHHHTT- CS
       RVT_1  99 tklinliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililsks.keelqelleaveewlkesgl 196
                                           g++e+ ++p+G++ +P+ f++++ne l e+       ++++Y+DDili++++  +e+++++  v e+l+++gl
  KHJ32676.1 105 -------------------------LGLFEWLVMPFGLNGAPASFQRYINETLLEYLDD----FCSAYVDDILIFTDGsLSEHENHVHLVLEKLQKAGL 174
                 .........................79**************************999995....9**************99******************* PP

                 -BEGGG-EEE CS
       RVT_1 197 kinpeKtklv 206
                  +  +K+ ++
  KHJ32676.1 175 GLDIDKCGFY 184
                 *******998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1362.60
//
Query:       KHJ32677.1  [L=859]
Description: putative family metal ion transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-42  144.3   0.2    2.1e-41  142.2   0.2    1.9  1  CorA        CorA-like Mg2+ transporter protein
  ------ inclusion threshold ------
       0.11   12.6   0.0       0.22   11.6   0.0    1.4  1  sCache_3_2  Single cache domain 3


Domain annotation for each model (and alignments):
>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.2   0.2   2.3e-45   2.1e-41       6     291 ..     531     852 ..     528     853 .. 0.93

  Alignments for each domain:
  == domain 1  score: 142.2 bits;  conditional E-value: 2.3e-45
        CorA   6 WldlsspteeeleeLaeelgldelaledlldseerprvedyddylllvlpsveldkseeeeeev.plsillgdnflitvrreplealdevikrlk.deg 102
                 Wld+ spt++e++ L+ ++++++l+ ed+l +e r +ve + +y ++ ++s+e+d+++e++ +  ++ +++ ++ +i+++ + ++   +v++r++  ++
  KHJ32677.1 531 WLDILSPTDAEMKVLSTTFDIHPLTVEDILMQEAREKVELFRNYYFVNYRSFEQDTNNEDYLNPlNMYVVVFRKGVISFHFSLTPHPANVRRRIRqLKD 629
                 ************************************************************99999999999************************9888 PP

        CorA 103 gkpkspgellyrlldeivdrlfellekleeeldeledel.........................edstkkeilrelaqlrrrlvklrralapnrevlkr 176
                  +  ++ ++ y+++d i+d + +l++++eee+d ++d +                         + ++  ++lr++ + r+++  + r l ++ +v+k 
  KHJ32677.1 630 YQILTSDWISYAIIDDITDVFVPLIQNIEEEVDNIDDAIlklhtpisdtkskkrekfpevgdgiFGESGGDMLRRVGDCRKKVMGMYRLLGNKADVIKG 728
                 99***********************************************************************************************99 PP

        CorA 177 lla.kaddklld..dedkeylrdlldelerllemlealrerleslqdtyssllser.......lNrvmkvLTvltaiflPlTlitGiyGmNfkglPele 265
                 + + +++++++   +e  +yl d++d++  +   l+++ + l + + +y ++++ r       + +v+ +LTvl +i++P+ +itG++GmN++  P+++
  KHJ32677.1 729 FAKrCNENWQIAprSEIGLYLGDIQDHIVTMTGNLTHYEKILARSHGNYLAQINIRmnerqeqTADVLGKLTVLGTIVIPMNIITGLWGMNVG-VPGQD 826
                 99976666666511456688************************************555555555677788**********************.**998 PP

        CorA 266 wsygypfvlllglmallailllfwfk 291
                  +   ++ + l +++l+++l+ f++ 
  KHJ32677.1 827 PQGDLTWFWCLTASLLFFGLTCFMIA 852
                 888777788999999***99999986 PP

>> sCache_3_2  Single cache domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.5e-05      0.22      55     113 ..     598     655 ..     559     659 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.5e-05
  sCache_3_2  55 yvvitDeegrvlah....pdpaevgrklsgpataaalkagrayvgtvtgtlgpslrvklPvfd 113
                 yvv+   +g +++h    p+pa+v+r++++++++++l+++ + + +++    +  +v++P+++
  KHJ32677.1 598 YVVVFR-KGVISFHfsltPHPANVRRRIRQLKDYQILTSDWISYAIID----DITDVFVPLIQ 655
                 777775.59********************************9999993....35788888665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (859 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1107  (0.0617435); expected 358.6 (0.02)
Passed bias filter:                      600  (0.0334653); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.29s 00:00:01.05 Elapsed: 00:00:00.45
# Mc/sec: 5731.53
//
Query:       KHJ32678.1  [L=464]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1154  (0.064365); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 3409.79
//
Query:       KHJ32679.1  [L=108]
Description: putative 60s ribosomal protein l36 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.2e-41  139.5   5.2    3.7e-41  139.3   5.2    1.0  1  Ribosomal_L36e   Ribosomal protein L36e
  ------ inclusion threshold ------
        0.1   12.7   0.1       0.12   12.5   0.1    1.1  1  PBS_linker_poly  Phycobilisome Linker polypeptide


Domain annotation for each model (and alignments):
>> Ribosomal_L36e  Ribosomal protein L36e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.3   5.2   4.1e-45   3.7e-41       1      95 [.       8     102 ..       8     103 .. 0.98

  Alignments for each domain:
  == domain 1  score: 139.3 bits;  conditional E-value: 4.1e-45
  Ribosomal_L36e   1 rsglavglnkGhkvtknvsklrpsrrkgrltkrtkfvrdiirevaGfapyerrvmellkvskdKralKfaKkrlgthirakrKreelsnvlaamr 95 
                     rsglavg+nkGhk++ ++ k+r sr+kg+l+krt+fvr+i++ev G+apyerr++ell++skdKra+K+aKkrlgt+ rak+K++el++v+a+++
      KHJ32679.1   8 RSGLAVGINKGHKTQPRTPKPRVSRTKGHLSKRTAFVREIVKEVSGMAPYERRIIELLRNSKDKRARKLAKKRLGTFGRAKAKVDELQRVIAESK 102
                     689*****************************************************************************************987 PP

>> PBS_linker_poly  Phycobilisome Linker polypeptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   1.3e-05      0.12      28      93 ..      29      99 ..      19     107 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.3e-05
                     STHHHHHHHHTTSS-HHHHHHHHHCSHHHHHHHTTTS-H...HHHHHHHHHHH..TSS--SSHHHHHHHHH CS
  PBS_linker_poly 28 rlselesklkngeisvrefvralakSelYrkrfyeklsn...yrvielafkhl..LGRapesqaEiskysk 93
                     r s++  +l++++  vre v+++     Y++r++e l n    r+ +la k+l   GRa ++ +E++++++
       KHJ32679.1 29 RVSRTKGHLSKRTAFVREIVKEVSGMAPYERRIIELLRNskdKRARKLAKKRLgtFGRAKAKVDELQRVIA 99
                     667777889999********************988655511157888999998778999999999988764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 796.29
//
Query:       KHJ32680.1  [L=341]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2455.15
//
Query:       KHJ32681.1  [L=228]
Description: hypothetical protein EV44_g0983 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.02   13.8   0.0      0.028   13.3   0.0    1.1  1  Polyoma_lg_T_C   Polyomavirus large T antigen C-terminus
      0.043   13.5   0.0       0.06   13.0   0.0    1.2  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type


Domain annotation for each model (and alignments):
>> Polyoma_lg_T_C  Polyomavirus large T antigen C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   3.1e-06     0.028      70     126 ..      93     150 ..      81     157 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.1e-06
  Polyoma_lg_T_C  70 ksicqqavdtvlakkrvdslhltreemlterfndlldk.mdlifgahgnavleeymag 126
                      sic +  d + ak+  d++  tr++  +  + + l+  m + f ++ +  +++++a 
      KHJ32681.1  93 PSICPRNYDNMTAKQLYDTIASTRQQTAAAHYATALEAlMSVTFNSTADEYIDQFLAS 150
                     59******************************998875499**************996 PP

>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   6.7e-06      0.06       7      75 ..      82     148 ..      76     163 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.7e-06
  Retrotran_gag_2   7 kalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkle 75 
                      +a+++I   +s+s   +  ++ tak+++d+++++ +++ aa+ +t ++ l+s  ++ +    ++i+++ 
       KHJ32681.1  82 EAKNIITMRLSPSICPRNYDNMTAKQLYDTIASTRQQTAAAHYATALEALMSVTFNST--ADEYIDQFL 148
                      799************************************************9999876..556666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       554  (0.0308997); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1806.45
//
Query:       KHJ32682.1  [L=208]
Description: hypothetical protein EV44_g6095 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.014   15.6   0.4         12    6.1   0.0    3.0  3  Cor1      Cor1/Xlr/Xmr conserved region


Domain annotation for each model (and alignments):
>> Cor1  Cor1/Xlr/Xmr conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0    0.0023        41      51      73 ..      16      38 ..      13      41 .. 0.89
   2 ?    1.8   0.1     0.014   2.5e+02      44      72 ..      59      87 ..      47     118 .. 0.84
   3 ?    6.1   0.0   0.00065        12      87     116 ..     133     162 ..     128     176 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0023
        Cor1 51 fqqwetdvqkvkeqeeklsnlfq 73
                f++wetdvq +  ++++l+ +f+
  KHJ32682.1 16 FSEWETDVQAALAEKKRLAYVFH 38
                89**********99999998886 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.014
        Cor1 44 sqqfltlfqqwetdvqkvkeqeeklsnlf 72
                + q++tl++++  +v+k  e + +  n++
  KHJ32682.1 59 ETQYQTLLEKYHDNVDKWIEGDVEAKNIL 87
                67899999999999999888877777765 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.00065
        Cor1  87 eqrlkeikqlydqFlksledLekeheklls 116
                 +++++++ + +d+Fl++l +L++  e l  
  KHJ32682.1 133 STTFTTAEEYCDNFLQNLLSLNSAAEALAE 162
                 578999***************999887543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.44
# Mc/sec: 1425.79
//
Query:       KHJ32683.1  [L=505]
Description: putative c2 domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-13   50.9   0.0    3.1e-13   49.9   0.0    1.5  1  C2        C2 domain


Domain annotation for each model (and alignments):
>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   0.0   1.7e-17   3.1e-13       3      94 ..      32     134 ..      30     141 .. 0.89

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 1.7e-17
                 EEEEEEEEESSSSSST.TSSCEEEEEEEE..........ECEEEEEE-SCSSSSSSEEEEEEEE.EESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGH CS
          C2   3 levtvieAknLpnkdk.kgssdpyvkvsl..........dgkqkakTrviknslnPvWnekftf.evaeleeakLeveVfdndrlskddfiGkveipls 89 
                 +++t+++A+nLp+ d  ++ sdpyv ++l          d +   +T +i+ns+nP+W+ +  +  ++     kL+ +++d+d+  +dd +G+v++ ++
  KHJ32683.1  32 IKFTIHRAENLPRSDLtTKFSDPYVIATLksdlprrhdsDPDMEIRTPTIHNSVNPQWETQWIVaGIPS-TGFKLKCRIYDEDQADRDDRLGNVTLLVD 129
                 789***********996666******************9999****************96666626666.**************************999 PP

                 HHHTT CS
          C2  90 tllsg 94 
                 ++++g
  KHJ32683.1 130 RVKTG 134
                 96654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3782.06
//
Query:       KHJ32684.1  [L=203]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1216  (0.0678231); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1482.93
//
Query:       KHJ32685.1  [L=310]
Description: hypothetical protein EV44_g3026 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-22   78.7   2.7    6.8e-22   77.4   2.7    1.8  1  DnaJ      DnaJ domain


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.4   2.7   3.8e-26   6.8e-22       2      63 .]      28      91 ..      27      91 .. 0.95

  Alignments for each domain:
  == domain 1  score: 77.4 bits;  conditional E-value: 3.8e-26
                HHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHH..HHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  2 yYeiLgvskdasedeIkkaYrklalkyHPDknpkdp..eaeekFkeineAyevLsdpekRkqYD 63
                +Y+iL+++k+a+ d+Ik+aYrk alk+HPDk p d+  +a+ kF+ei+ Ay vLsdp++R+ YD
  KHJ32685.1 28 PYSILNLDKSATFDQIKSAYRKAALKHHPDKVPADRkqQAHGKFQEIAYAYAVLSDPKRRELYD 91
                7******************************97777679999*********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1201  (0.0669864); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.21s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2397.50
//
Query:       KHJ32686.1  [L=1038]
Description: putative qde2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-70  238.1   0.0    1.9e-70  237.5   0.0    1.3  1  Piwi      Piwi domain
    4.6e-15   56.4   0.1    7.9e-15   55.7   0.1    1.4  1  ArgoN     N-terminal domain of argonaute
      1e-11   44.3   0.1    2.3e-11   43.2   0.1    1.7  1  ArgoL1    Argonaute linker 1 domain
    9.6e-09   35.5   0.0    2.4e-08   34.2   0.0    1.8  1  ArgoL2    Argonaute linker 2 domain
    1.9e-08   34.2   0.1    1.7e-07   31.1   0.0    2.1  2  PAZ       PAZ domain
    7.8e-05   22.9   0.0    0.00019   21.6   0.0    1.7  1  ArgoMid   Mid domain of argonaute


Domain annotation for each model (and alignments):
>> Piwi  Piwi domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.5   0.0   6.4e-74   1.9e-70       2     299 ..     678     993 ..     677     996 .. 0.92

  Alignments for each domain:
  == domain 1  score: 237.5 bits;  conditional E-value: 6.4e-74
                 EEEEECSSGHHCHHHHHHHHHHTCCCCEEEEEHHHHCTCCHHHHHHHHHHHHHHHHTT-BS-EEESSSTTSSE......EEEEEEEEEECCC.SCCCEE CS
        Piwi   2 ilvilpekkkdkyheikkyletdlgiisqcillktilkrqlkkqtltnvllkinvKlGgknvliveikleldv..sptliiGidishgtagt.vdnpsv 97 
                 +l++++++  + y+ ik++ +t  gi++ c+  ++  k + + q+ +n++lk+n+K Gg+n  +  +kl + +   +t+++G+d++h++ g   ++ps 
  KHJ32686.1 678 LLCVMAADDPSLYNIIKSIGDTRAGIHTVCVIGSKFTKEKGQGQYFANIALKFNMKAGGINHILDPAKLGV-IseGETMVVGLDVTHPSPGSkLGTPSS 775
                 79*************************************99********************8888888876.45899*************99899**** PP

                 EEEEEEEETSSEEEEEEEEESSCCCCHHHHHHHHHHHHHHHHHHTTTT-TTSEEEEEESS....S..S-HHHHHHHHHHHHH.....HHHHCTT....T CS
        Piwi  98 aavvasldkensrylaevstqassqelleklkeiikellrefkksskkkkperiivyRdGvseGqfkqvlnsEvkelkealk.....klkeqyq....p 187
                 +a+vas+dk  +++ a+++ q  +qe++ +++  +   l+ +++++k  +p++ii+yRdGvseGq+  vl++Ev+ +++a++     +    +     p
  KHJ32686.1 776 VAMVASVDKFLAQWPADFRIQMGRQEMVSDVEGLLLGRLKLWRQFNKR-LPKNIILYRDGVSEGQYGMVLDDEVPGIRKACRqvyspD----ETkqglP 869
                 ***********************************************8.*********************************644331....334466* PP

                 EEEEEEEECSCS--EEESESTC..CCEETTTCEEETTEEEEEEEECCEEECCCCEEEEEEEEEEEEEEES............S-CCHHHHHHHHHCTGG CS
        Piwi 188 kltvivvqkrhhtrfFasdkae..ksqnippGtvvdkkitlpeekdfylcshaglqgtvkPtkytvlvdea..........klsadelqsltyklchmy 274
                 +l viv  krh+trfF+++ ae  +s n +pGt++d  it     df+l  ha +qgt++P++y v++de+          +  ad+l++lt+++ch++
  KHJ32686.1 870 HLSVIVCGKRHNTRFFPATLAEcdRSSNCLPGTIIDRGITMNRTWDFFLQPHACIQGTARPCHYFVVLDEIfrnralkaphQNVADSLEDLTHNMCHLF 968
                 *********************999**********************************************754443333333457999*********** PP

                 TTTTSS-SS-HHHHHHHHHHHHHHT CS
        Piwi 275 qrstrsvsiPapvyyAhklAkrvrn 299
                 qr+t++vs+ +p+yyA++l +r+r+
  KHJ32686.1 969 QRATKAVSLCPPAYYADLLCTRLRC 993
                 **********************997 PP

>> ArgoN  N-terminal domain of argonaute
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   0.1   2.6e-18   7.9e-15       1     137 [.     141     279 ..     141     280 .. 0.73

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 2.6e-18
       ArgoN   1 rpiklraNyFkvtslpdktlyhYdveitkkakrvglrriielllee.ykkselagkkpayDgrknlysakkLpkefedl.paaeesakkepsekrrrks 97 
                 +pi+++ NyFk+++++d  l +Y+ +++++ak+ +  r+++llle  ++ s++++ ++a+D+++ l+++++L    +d+  +++ + ++e +++  +++
  KHJ32686.1 141 KPISVYSNYFKIDVPQDLRLARYNISVSPEAKGKKMARVVSLLLERpEF-SKVQT-RFATDFKSFLVASRPL----TDMpAQWNIRYSPEGHDEAGEEA 233
                 79***********88888******98884443333569******66344.55555.8***************....43333344444445555556666 PP

       ArgoN  98 rtfkvtikfaksinlqsLleylr....gkq..deasleaiqaLdiv 137
                 ++f v++++   +++++ ++yl+    +++  +e++  +iq L++v
  KHJ32686.1 234 KVFIVKLQEPAFFSVSNFVKYLSsanvKDNfnEEEQKSIIQSLNVV 279
                 7*********88**********6344322243344444*******9 PP

>> ArgoL1  Argonaute linker 1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2   0.1   7.8e-15   2.3e-11      11      51 ..     307     346 ..     294     347 .. 0.84

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 7.8e-15
      ArgoL1  11 skqrvdLggggleawrGfyqSvRptqggLllNvDvsntaFy 51 
                 + + ++L g+glea+rGf  S R ++gg+llN++v++++F+
  KHJ32686.1 307 NINIRPL-GDGLEAYRGFVRSTRAVTGGILLNINVTHAVFF 346
                 567789*.77******************************8 PP

>> ArgoL2  Argonaute linker 2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0     8e-12   2.4e-08       1      47 []     519     568 ..     519     568 .. 0.95

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 8e-12
      ArgoL2   1 eRkksIle.gvkvlgydd.dpyl.rafGisidpqmttVpGRvLppPtlkY 47 
                 e+++sI++ g + lg+++ d  + ++fG++i++ +++V++R L pP++ Y
  KHJ32686.1 519 ENAESIVRdGKSILGLNPgDKSTsSQFGLNIGKGLLVVNARTLHPPSINY 568
                 89**************88887777************************99 PP

>> PAZ  PAZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.18   5.5e+02      15      37 ..     358     380 ..     348     399 .. 0.82
   2 !   31.1   0.0   5.6e-11   1.7e-07      51     136 ..     438     509 ..     419     510 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.18
                 -SS----HHCCCCTTBEEEETTT CS
         PAZ  15 eerkdrkkaaealkgliVmtwyn 37 
                    ++r + +e+lkg+++ +++ 
  KHJ32686.1 358 MGTQNRVNLKEKLKGMRIQITHL 380
                 56788999*************94 PP

  == domain 2  score: 31.1 bits;  conditional E-value: 5.6e-11
                 S--TTSEECCTTCT..CECCHHHHCCT.---ST-TT--EEEEEES-SS----EEEEE-CCCCEEESSBCCCCCTCCCHHHHCCCH.. CS
         PAZ  51 dlapsstFpdkdkeneitfaeYfkkkY.nieikdqdqplldvdkktesehssqkqiLvpElcdihpisasqrykkkllpsilqrlnl 136
                 ++++++ +p++   ++i++++Yfkk+Y +ie+ d   p+++v++      s+++ +L+ E+c++    ++ + + +l  s  q+ ++
  KHJ32686.1 438 KTSQKNPLPSN---TYISVYDYFKKRYpKIEL-DPINPVVNVGN------SEHPSYLPAEVCQV---LPGNKVNRRL--SPRQTQEM 509
                 44555556666...79***********77888.3568*******......899***********...8888888888..76666555 PP

>> ArgoMid  Mid domain of argonaute
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   6.5e-08   0.00019       2      48 ..     575     625 ..     574     637 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 6.5e-08
     ArgoMid   2 prnGsWdmrgkqFlepkakikkWAilcfa.....sqrkvkenkledfikqlv 48 
                 ++nGsW+m +++F++  a++ +W ++ f+     s+ +++e+k+++ +  ++
  KHJ32686.1 575 VSNGSWNMARQKFHTN-AQLGTWSFVLFKpppsnSGPRLEEDKIRRSVMGFR 625
                 89**************.***********965555556666776666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1038 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.41
# Mc/sec: 7676.23
//
Query:       KHJ32687.1  [L=347]
Description: putative 30s ribosomal protein s7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-27   96.1   0.0    3.1e-27   95.1   0.0    1.5  2  Ribosomal_S7  Ribosomal protein S7p/S5e


Domain annotation for each model (and alignments):
>> Ribosomal_S7  Ribosomal protein S7p/S5e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.31   5.6e+03      54      69 ..     110     130 ..      86     143 .. 0.46
   2 !   95.1   0.0   1.7e-31   3.1e-27      19     148 ..     180     337 ..     165     338 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.31
                   HSS.....-HHHHHHHHHHHC CS
  Ribosomal_S7  54 tkk.....dplevleeAlenv 69 
                   t+k     +  ++l+  l n+
    KHJ32687.1 110 TQKgikpvNNDKILNASLANI 130
                   322333333344444444444 PP

  == domain 2  score: 95.1 bits;  conditional E-value: 1.7e-31
                   TSBHHHHHHHHHSBTTBHHHHHHHHHHHHHHHHHH....................HSS-HHHHHHHHHHHCS-SEEEEEEB...SSSSBEEEEEEE- CS
  Ribosomal_S7  19 nselveklinklmkdGkkslAekivygaldiieek....................tkkdplevleeAlenvkPrvevksrr...vGGatyqvpvevr 92 
                   + ++v++++n lmkdGkk  A++ ++ +l+++++                        dp+ +l+ A+++v+P ++++s r    GGa+  +pv++r
    KHJ32687.1 180 EVDIVSQVTNLLMKDGKKGAAQRNMSFILNVLRTApppkfnparplipghppahhLPLDPIGYLTLAIDSVAPLLRIRSERgaaGGGAALSIPVPLR 276
                   4589******************************98999988888887776654333499********************988889*********** PP

                   HHHHHHHHHHHHHHHHSTSSSS.....-HHHHHHHHHHHHHTT-SHHHHHHHHHHHHHHHT CS
  Ribosomal_S7  93 pkRrqalAlrwiieaarkrkek.....smaekLaeElidAaegegaavkkreethrmAean 148
                   +k+r++ A++wi++a++kr+++     s+a++ a+E+i+ +eg+++a++kr  +h+  + +
    KHJ32687.1 277 KKQRRRHAVMWILDAVSKRTNRgsgrgSFAQRFADEVINIVEGKSSAWEKRLMVHKAGTTA 337
                   ****************9998874444566***************************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       279  (0.0155614); expected 358.6 (0.02)
Passed bias filter:                      232  (0.0129399); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2787.95
//
Query:       KHJ32688.1  [L=672]
Description: putative bacterial transferase hexapeptide [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.4e-14   54.1   0.0    2.7e-14   53.1   0.0    1.5  1  Mac        Maltose acetyltransferase
    3.9e-11   42.2  11.9    4.5e-06   26.2   0.9    3.2  3  Hexapep    Bacterial transferase hexapeptide (six repeats)
    2.1e-09   37.0  13.2    9.7e-05   22.0   4.1    2.7  3  Hexapep_2  Hexapeptide repeat of succinyl-transferase
    2.8e-09   36.9  10.5    1.1e-08   35.0  10.5    2.1  1  Zn_clus    Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Mac  Maltose acetyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.1   0.0   6.1e-18   2.7e-14       1      48 [.     472     522 ..     472     529 .. 0.91

  Alignments for each domain:
  == domain 1  score: 53.1 bits;  conditional E-value: 6.1e-18
                 HHHTTS-BETTTSHHHHHHHHHHHHHHHHHHT.STTT...-HHHHHHHHHHH CS
         Mac   1 KMlaGelYdafsDpeLvaeRlrarelcrryNq.trps...dkdeRrelLrel 48 
                 KMlaG+lY++  D+eLv++R+r++ +c+r+N+   p+    +deR +l+r++
  KHJ32688.1 472 KMLAGQLYYPL-DKELVQDRKRCKVACWRFNNsVNPNlgvSPDERARLFRDI 522
                 9*********6.9******************9667778889*********98 PP

>> Hexapep  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.2   7.1e-05      0.32      13      28 ..     545     560 ..     527     562 .. 0.63
   2 !   18.5   4.0   2.6e-07    0.0012       2      32 ..     546     578 ..     545     581 .. 0.86
   3 !   26.2   0.9     1e-09   4.5e-06       2      36 .]     604     638 ..     603     638 .. 0.96

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 7.1e-05
                 TEEEETTEEE-TTEEE CS
     Hexapep  13 faviggnVkIGdnvkI 28 
                 +  ig++V+IG+n++I
  KHJ32688.1 545 NISIGSDVQIGKNCTI 560
                 4556666666666665 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 2.6e-07
                 EEEETTEEE-TTEEEET..TEEE-TTEEEETTE CS
     Hexapep   2 tvIGsnvlIgpfavigg..nVkIGdnvkIgagv 32 
                 + IGs+v+Ig++++i++   VkIG++++Ig++v
  KHJ32688.1 546 ISIGSDVQIGKNCTILDvcEVKIGNRCHIGPNV 578
                 689********999987446899******9997 PP

  == domain 3  score: 26.2 bits;  conditional E-value: 1e-09
                 EEEETTEEE-TTEEEETTEEE-TTEEEETTEEEES CS
     Hexapep   2 tvIGsnvlIgpfaviggnVkIGdnvkIgagvvigg 36 
                 ++I ++++I   + i+++ +IG+++++gag+v+++
  KHJ32688.1 604 VTIKDDCWICGRVLILPGLTIGEGSVVGAGSVVTK 638
                 78*******************************86 PP

>> Hexapep_2  Hexapeptide repeat of succinyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.2   5.2e+03      20      28 ..     528     536 ..     527     536 .. 0.86
   2 !   22.0   4.1   2.2e-08   9.7e-05       1      33 [.     545     581 ..     545     582 .. 0.89
   3 !   20.3   1.0   7.4e-08   0.00033       2      34 .]     604     638 ..     603     638 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.2
                 E-TT-EE-T CS
   Hexapep_2  20 lGdncvvga 28 
                 +Gd+ vv+a
  KHJ32688.1 528 VGDGFVVEA 536
                 89*999997 PP

  == domain 2  score: 22.0 bits;  conditional E-value: 2.2e-08
                 .EEE-TT-EE-TT-EE....SEEE-TT-EE-TT-EE- CS
   Hexapep_2   1 pviIGdnCliGanagi....GvslGdncvvgaGvvit 33 
                 +++IG ++ iG+n++i     v++G++c++g++v i+
  KHJ32688.1 545 NISIGSDVQIGKNCTIldvcEVKIGNRCHIGPNVDIY 581
                 589************886566************9765 PP

  == domain 3  score: 20.3 bits;  conditional E-value: 7.4e-08
                 EEE-TT-EE-TT-EE..SEEE-TT-EE-TT-EE-S CS
   Hexapep_2   2 viIGdnCliGanagi..GvslGdncvvgaGvvita 34 
                 v+I d+C i  +  i  G ++G+++vvgaG+v+t+
  KHJ32688.1 604 VTIKDDCWICGRVLIlpGLTIGEGSVVGAGSVVTK 638
                 788899***99*9999******************7 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0  10.5   2.5e-12   1.1e-08       1      35 [.     253     287 ..     253     291 .. 0.93

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 2.5e-12
                 SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCT CS
     Zn_clus   1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfyse 35 
                 ++C +Cr++K KCd+ +P+C nC++ +++Ct y+ 
  KHJ32688.1 253 TGCMTCRRRKKKCDETRPKCNNCVRGGFTCTGYQT 287
                 58*****************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (672 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1269  (0.0707792); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.31s 00:00:00.96 Elapsed: 00:00:00.46
# Mc/sec: 4435.66
//
Query:       KHJ32689.1  [L=382]
Description: putative ribonucleotide reductase small subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.6e-121  405.1   4.3   1.9e-121  404.8   4.3    1.0  1  Ribonuc_red_sm  Ribonucleotide reductase, small chain
  ------ inclusion threshold ------
       0.15   12.9   0.0       0.34   11.8   0.0    1.5  1  DUF4744         Domain of unknown function (DUF4744)


Domain annotation for each model (and alignments):
>> Ribonuc_red_sm  Ribonucleotide reductase, small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  404.8   4.3  2.1e-125  1.9e-121       1     279 []      57     325 ..      57     325 .. 0.99

  Alignments for each domain:
  == domain 1  score: 404.8 bits;  conditional E-value: 2.1e-125
                     TT-TTS-SSHHHHHHHHHHHCT---GGGS-GHHHHHHHHSTS-HHHHHHHHHHHHHHHHHHHHHHHCHHHCHHCCBSSHHHHHHHHHHHHHHHHH CS
  Ribonuc_red_sm   1 rfvlfpikypeiwelykkleanfWtpeevdlskDlkdwkekLsedekefikkvlaflalldtivnenlverllsevqipearafygfqaamEniH 95 
                     rfv+fpiky+eiw++ykk+ea+fWt+ee+dlskD++dw+++L++de+ fi++vlaf+a++d+ivnenlver++sevqipear fygfq++mEniH
      KHJ32689.1  57 RFVIFPIKYHEIWHMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERYFISHVLAFFAASDGIVNENLVERFSSEVQIPEARFFYGFQIMMENIH 151
                     79********************************************************************************************* PP

                     HHHHHHHHHHHT.-HHHHHHHHCHHHH-HHHHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTSSHHHHHHHHHHHHH CS
  Ribonuc_red_sm  96 aesYsllletlvkdekekdelfnaieenpalqkkaewikkwyeskkdeekfaerlvafallegilfysgFaailwlkkrgllpglaeiielilrD 190
                     +e+Ysll++t++kd+++k+ lfnaie++p+++kk++w+ +w+++k++  +f +rlvafa++egi+f+++Fa+i+wlkkrgl+ gl++++eli+rD
      KHJ32689.1 152 SETYSLLIDTYIKDQAQKTYLFNAIETIPCIKKKSDWAVRWIQDKES--TFGQRLVAFAAVEGIFFSGSFASIFWLKKRGLMAGLTFSNELISRD 244
                     *******************************************9885..7********************************************* PP

                     HHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT.BTTCHHHHHHHHHHHHHHHHHHCTT---SS-TT---C CS
  Ribonuc_red_sm 191 eglHtdfagllfkelkeenelenkeleeeveelikeavelEkefitdalpvellglnkedvkqYieyvadrllmnlgyeklYnveeenP 279
                     eglHtdfa+llf++l  +    ++++++ v+++i++ave+E+ef+t+alp+ llg+n+ ++kqYie+vadrll +lg  k+Y+v  +nP
      KHJ32689.1 245 EGLHTDFACLLFSHL--K----HRPSKQSVQDVITQAVEIEQEFLTEALPCALLGMNATLMKQYIEFVADRLLLSLGNSKVYKV--KNP 325
                     ***************..5....56************************************************************..898 PP

>> DUF4744  Domain of unknown function (DUF4744)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.8e-05      0.34      40      59 ..     146     165 ..     128     167 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.8e-05
     DUF4744  40 sepnkpsssFdlaidnYLKD 59 
                  + n  s +++l+id+Y+KD
  KHJ32689.1 146 MMENIHSETYSLLIDTYIKD 165
                 678899*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       523  (0.0291706); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2855.25
//
Query:       KHJ32690.1  [L=424]
Description: putative arrestin (or s-antigen) n-terminal domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-38  132.2   0.1    1.6e-37  129.1   0.1    2.1  2  LDB19       Arrestin_N terminal like
      5e-05   23.4   0.0    9.9e-05   22.4   0.0    1.5  1  Arrestin_N  Arrestin (or S-antigen), N-terminal domain
  ------ inclusion threshold ------
      0.086   12.7   0.5       0.35   10.7   0.1    2.1  2  DUF1289     Protein of unknown function (DUF1289)


Domain annotation for each model (and alignments):
>> LDB19  Arrestin_N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.1   0.1   2.7e-41   1.6e-37       3     191 ..      73     248 ..      71     250 .. 0.92
   2 ?    0.5   0.0     0.069   4.1e+02      48     114 ..     283     355 ..     274     359 .. 0.80

  Alignments for each domain:
  == domain 1  score: 129.1 bits;  conditional E-value: 2.7e-41
       LDB19   3 lklvkkvhvkkpfvadlsaiqtCsaCktkteelksWdlqkntkdlkvGsysyPfsylipGslpassslgsnaetkvkyeliavvvykdptprkgasssk 101
                 ++lv  ++ k+p        ++Cs+C+ + +el+sW +++ +++++ G+++ Pfs+++pG+l asss   ++   ++y+l av++            + 
  KHJ32690.1  73 MSLVMDITRKRP------FHSHCSNCERNRTELESWKFLNSPTKFRKGKHKLPFSWILPGNLTASSS---GTLFSIEYKLHAVLAL-----------GG 151
                 789999999999......578*********************************************9...999***********99...........23 PP

       LDB19 102 eellklamPikvkravlrgP.dknslrvfPPtelvatavlPsvvyPksafplelkleGvsegd......rrWrlrkltWrieettrikshaCdkhkh 191
                  e + +++ ++vkra++++   +ns+r+fPPt+l+a+  lPs+++P +  ++ + ++G ++++      r W+l++l W ++et++i s  C kh  
  KHJ32690.1 152 VEDIMFSKTLEVKRAIIPSEiPRNSIRIFPPTNLTANCGLPSILHPYGISMVSIIIDGCVRENaeskilRLWKLKRLHWYLNETQKIFSPGCGKHLA 248
                 3446788889*******996369***********************************9998888889999************************75 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.069
       LDB19  48 kvGsysyPfsylipGslpassslgsnaetkvkyeliavvvykdp......tprkgassskeellklamPikvk 114
                 ++G  +  f + i     +   l ++  ++v++ li  +++++        p + +s++  ++l+++  ++v+
  KHJ32690.1 283 SPGRIEMEFPCAIRSGARPICDLKTQDGIEVSHSLIVQMIFVEEtvslirSPIEATSTGSARVLRMNFNMTVT 355
                 6777888888888888888888899999999999999888877778888888888899999999998877776 PP

>> Arrestin_N  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   1.7e-08   9.9e-05      67     127 ..      92     151 ..      49     170 .. 0.77

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 1.7e-08
                 EEESTSSSSS.SSSSHHHHHHHH-TTEEEEEE---TTS--SECSGEEEEEEEEEEEEECCC CS
  Arrestin_N  67 qeyleteksllkskkdsqekLpkGehafpFsfelPknlpsSfeGkaggvrYevkvtldrpw 127
                  e  +te + +k   +s +k+ kG+h+ pFs  lP nl  S  G+  +++Y+++++l+   
  KHJ32690.1  92 CERNRTELESWKF-LNSPTKFRKGKHKLPFSWILPGNLTASSSGTLFSIEYKLHAVLALGG 151
                 4445666677777.788899***********************************998655 PP

>> DUF1289  Protein of unknown function (DUF1289)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   5.9e-05      0.35      13      37 ..      86     110 ..      81     114 .. 0.86
   2 ?   -1.6   0.0      0.42   2.5e+03      18      25 ..     209     216 ..     208     220 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 5.9e-05
     DUF1289  13 dglClGCgRtldEiaaWssmsdeer 37 
                 + +C  C R++ E   W+ +++  +
  KHJ32690.1  86 HSHCSNCERNRTELESWKFLNSPTK 110
                 579***************9887665 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.42
     DUF1289  18 GCgRtldE 25 
                 GC R + E
  KHJ32690.1 209 GCVRENAE 216
                 9***9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3024.12
//
Query:       KHJ32691.1  [L=200]
Description: putative ph domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-36  124.5   0.4    2.5e-36  124.1   0.4    1.1  1  DUF4112   Domain of unknown function (DUF4112)


Domain annotation for each model (and alignments):
>> DUF4112  Domain of unknown function (DUF4112)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.1   0.4   1.4e-40   2.5e-36       2     105 .]      60     163 ..      59     163 .. 0.97

  Alignments for each domain:
  == domain 1  score: 124.1 bits;  conditional E-value: 1.4e-40
     DUF4112   2 lkkvrklayllDkalripgcglrfGldpiigliPvvGdvisallslylvleakkaeg.lpkslllrmlvnialDlliglvPvvGdlfdvlfkantrNaa 99 
                 l+kv+++ay+lD +l +++cg+rfG++++ig++P++Gd+++++++l+++++++k++g lpks+ ++ml+ni++D+ +gl+P++Gd++d+lf+antrNa 
  KHJ32691.1  60 LTKVKRRAYRLDLCL-CNCCGIRFGWSSVIGIVPGFGDALDVFMALMVLRTCQKVDGgLPKSVQAKMLINIIIDFGVGLIPFIGDIADALFRANTRNAI 157
                 789**********77.79**********************************999978***************************************** PP

     DUF4112 100 llekhl 105
                 lle+hl
  KHJ32691.1 158 LLEQHL 163
                 ****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1532.77
//
Query:       KHJ32692.1  [L=432]
Description: hypothetical protein EV44_g5649 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0093   16.1   4.8      0.019   15.1   4.8    1.5  1  KIP1      KIP1-like protein
  ------ inclusion threshold ------
        2.4    7.7  15.1        3.8    7.1  15.1    1.2  1  DDRGK     DDRGK domain


Domain annotation for each model (and alignments):
>> KIP1  KIP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   4.8   2.1e-06     0.019      10      58 ..     306     357 ..     302     371 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.1e-06
        KIP1  10 skqskwLqe...tlseldekvkemlklieedadsfakraemyykkrpeLiel 58 
                 ++ s+wLq+   t+s++d+ ++++ kli  ++ s ++ +e + ++  e+++ 
  KHJ32692.1 306 PNVSSWLQNsrdTKSDIDQETERLKKLIAAEEKSRKDAKEEEERRTREMLRA 357
                 78899**9644489**************999999988888877777777665 PP

>> DDRGK  DDRGK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  15.1   0.00042       3.8      16      79 ..     314     380 ..     311     390 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.00042
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXX CS
       DDRGK  16 kkrqqreaeeeereerkkleekreeerkekeekeeekek...kkeeeerkkeeekerkeqeeyeklk 79 
                 + r  +   ++e e+ kkl + +e+ rk+++e+ee++ +   ++eeeer+ +e k +ke ee+ kl 
  KHJ32692.1 314 NSRDTKSDIDQETERLKKLIAAEEKSRKDAKEEEERRTRemlRAEEEERRLREAKVEKETEELRKLY 380
                 5677888899999999999888877777765554444431115677788888888899999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1605  (0.0895198); expected 358.6 (0.02)
Passed bias filter:                      678  (0.0378158); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 2997.02
//
Query:       KHJ32693.1  [L=639]
Description: hypothetical protein EV44_g6459 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.014   13.5  15.6       0.02   13.0  15.6    1.1  1  DNA_pol_phi  DNA polymerase phi
      0.028   14.7   2.6       0.05   13.9   2.6    1.4  1  PTPRCAP      Protein tyrosine phosphatase receptor type C-ass
      0.039   13.4   7.6      0.059   12.8   7.6    1.2  1  SDA1         SDA1
      0.071   13.2   8.7       0.12   12.5   8.7    1.2  1  YL1          YL1 nuclear protein
       0.13   10.5   8.9       0.19   10.0   8.9    1.1  1  CDC45        CDC45-like protein
       0.16   10.2  10.7       0.22    9.7  10.7    1.1  1  Nop14        Nop14-like family
       0.39   10.0   8.4       0.74    9.1   8.4    1.4  1  BUD22        BUD22
       0.58    9.1   3.5        1.1    8.2   3.5    1.3  1  IFT57        Intra-flagellar transport protein 57
       0.94    9.3  10.6          2    8.2  10.6    1.4  1  Sigma70_ner  Sigma-70, non-essential region
        2.3    8.2   8.5        5.5    7.0   8.5    1.6  1  RXT2_N       RXT2-like, N-terminal
        2.4    7.9   6.6        4.4    7.0   6.6    1.3  1  TFB6         Subunit 11 of the general transcription factor T
        3.1    7.4   6.7        7.1    6.3   6.7    1.6  1  FAM176       FAM176 family
        4.7    6.3   5.6        7.4    5.7   5.6    1.2  1  TRAP_alpha   Translocon-associated protein (TRAP), alpha subu
        6.4    5.2  11.9        8.8    4.7  11.9    1.1  1  RRN3         RNA polymerase I specific transcription initiati


Domain annotation for each model (and alignments):
>> DNA_pol_phi  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0  15.6   1.6e-05      0.02     646     679 ..      26      59 ..       7      79 .. 0.49

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.6e-05
  DNA_pol_phi 646 eddeeeeeeddeededseedddeeesdedeeded 679
                  ++d+++++++de++e++++dd++ee d+d++d+d
   KHJ32693.1  26 DEDDDDDDDEDEDEEEDDDDDEDEEFDDDDNDDD 59 
                  2222222222222222222222222222222233 PP

>> PTPRCAP  Protein tyrosine phosphatase receptor type C-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   2.6   3.9e-05      0.05      32      70 ..      22      60 ..       9     126 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.9e-05
     PTPRCAP 32 rWlraraedgeedeeeEdqedeedeeedsedleggeeea 70
                 W r + +d+++de+e+++ed++d e++++d +++ +++
  KHJ32693.1 22 IWSRDEDDDDDDDEDEDEEEDDDDDEDEEFDDDDNDDDR 60
                688888777777776666677777776654444443333 PP

>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   7.6   4.6e-05     0.059     132     168 ..      27      59 ..      17     122 .. 0.51

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.6e-05
        SDA1 132 esdesedeeeeeeeeeekeekeeeeeeeeeeeeeeee 168
                 e+d ++d++e+e+eee+++++e+ee ++   ++++++
  KHJ32693.1  27 EDD-DDDDDEDEDEEEDDDDDEDEEFDD---DDNDDD 59 
                 111.111111122122222222221111...111111 PP

>> YL1  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   8.7   9.1e-05      0.12      29      73 ..      24      63 ..      13     134 .. 0.45

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 9.1e-05
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         YL1 29 aEeedDeefeseeeeeeeensDsdfdsdeedeesdeeedeeegek 73
                  +edD++  +e+e+eee  +D   d+de++e +d+++d+++g  
  KHJ32693.1 24 SRDEDDDDDDDEDEDEEE--DD---DDDEDEEFDDDDNDDDRGRV 63
                444444444443333333..22...12222222333333333322 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   8.9   0.00015      0.19     130     171 ..      27      64 ..      13     121 .. 0.54

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00015
       CDC45 130 eesdeedeeeeeeddddeeeeeeeeedeedeeedeeeskkkr 171
                 e++d +d++e+e++++d++++e+ee d++d+++d  +    r
  KHJ32693.1  27 EDDD-DDDDEDEDEEEDDDDDEDEEFDDDDNDDDRGR---VR 64 
                 2222.22222222222222222222222222222222...22 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7  10.7   0.00018      0.22     377     409 ..      27      59 ..      20     104 .. 0.45

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00018
       Nop14 377 eeeeedeeeeeeeeededdlsdleseeeeeede 409
                 e++++d++e+e+eeed+dd++d+e ++++++d+
  KHJ32693.1  27 EDDDDDDDEDEDEEEDDDDDEDEEFDDDDNDDD 59 
                 222222222222222222222222222222222 PP

>> BUD22  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   8.4   0.00058      0.74     224     265 ..      31      75 ..      18     138 .. 0.55

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00058
       BUD22 224 asddededeyneetdeesseesdssdssesasesesessek......k 265
                 ++ddedede+++++d+e++e +d++++++    ++s+   +      +
  KHJ32693.1  31 DDDDEDEDEEEDDDDDEDEEFDDDDNDDDRGRVRQSN---PvphrlqT 75 
                 2334444433333333333333333333332222222...22223331 PP

>> IFT57  Intra-flagellar transport protein 57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   3.5   0.00084       1.1     117     169 ..      13      60 ..       5      93 .. 0.59

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00084
       IFT57 117 kkkfkfkkpkypkeeeeeeeeeveddaelelekveeeelikseeededeedee 169
                 +++f+f k   +++e+ +++++ ++d+e ++++ e+ee      +d+d++d+ 
  KHJ32693.1  13 RSRFRFGKIIWSRDEDDDDDDDEDEDEEEDDDDDEDEEF-----DDDDNDDDR 60 
                 556999999999887766666665555555555555544.....222222221 PP

>> Sigma70_ner  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2  10.6    0.0016         2      32      74 ..      27      64 ..       5      72 .. 0.51

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0016
  Sigma70_ner 32 eeeeeeeeeeeedeeeeeeeedddeeeseseaadeeelkeeal 74
                 e ++++    ++de+e+eee+ddd+e++e +++d+  ++ +++
   KHJ32693.1 27 E-DDDD----DDDEDEDEEEDDDDDEDEEFDDDDNDDDRGRVR 64
                 2.2222....222222333333333455555555555555554 PP

>> RXT2_N  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   8.5    0.0043       5.5      61      86 ..      29      55 ..      12      87 .. 0.53

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0043
      RXT2_N 61 ekeeeeedeegdeededdddee.eaea 86
                ++++++ede+++e+d+dd+dee ++++
  KHJ32693.1 29 DDDDDDEDEDEEEDDDDDEDEEfDDDD 55
                222222222222222222222221111 PP

>> TFB6  Subunit 11 of the general transcription factor TFIIH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   6.6    0.0034       4.4     104     151 ..      13      59 ..       4      67 .. 0.52

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0034
        TFB6 104 rtRvlvvevlereeeeeeeeedeeededeeeeeeeeeeeeeeedeede 151
                 r+R+++ +++ +++e++++++de+ede+e+++++e+ee +++++ +d+
  KHJ32693.1  13 RSRFRFGKIIWSRDEDDDDDDDEDEDEEEDDDDDEDEEFDDDDN-DDD 59 
                 56666666666665666544444444444444444333222222.222 PP

>> FAM176  FAM176 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   6.7    0.0055       7.1      66      91 ..      29      54 ..      13      88 .. 0.57

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0055
      FAM176 66 ekasededeeeeeeeedsseseaeee 91
                +++++dede+eee+++d++++e++++
  KHJ32693.1 29 DDDDDDEDEDEEEDDDDDEDEEFDDD 54
                22223333333333333333333332 PP

>> TRAP_alpha  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   5.6    0.0058       7.4      30      71 ..      26      65 ..       6      85 .. 0.54

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0058
  TRAP_alpha 30 eedevddelvdveaedeeveeeeeeeeeeeeeeeedee.elka 71
                +ed+ dd+  d e edee++++++e+ee  +++++d++ ++++
  KHJ32693.1 26 DEDDDDDD--D-EDEDEEEDDDDDEDEEFDDDDNDDDRgRVRQ 65
                33333333..2.3344444444443333333333333234444 PP

>> RRN3  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7  11.9    0.0069       8.8     214     258 ..      22      61 ..       4      85 .. 0.47

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0069
        RRN3 214 qveledlddeedeeleeeleededdedddeddeesdlddlssdee 258
                     ++ dd++d+e+e+e   + +d+ddded+ e d+dd ++d++
  KHJ32693.1  22 IWSRDEDDDDDDDEDEDE---E-EDDDDDEDE-EFDDDDNDDDRG 61 
                 444555555555544433...1.222222222.233333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (639 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       965  (0.0538234); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                       113  (0.00630264); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.75u 0.29s 00:00:01.04 Elapsed: 00:00:00.44
# Mc/sec: 4367.90
//
Query:       KHJ32694.1  [L=287]
Description: putative pre-mrna-splicing factor cwc23 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-16   60.4   0.5    1.4e-16   60.4   0.5    2.0  2  DnaJ      DnaJ domain
  ------ inclusion threshold ------
        1.7    8.5   8.8       0.25   11.1   0.9    2.4  2  DUF501    Protein of unknown function (DUF501)
        9.8    6.5  12.3       0.68   10.2   3.6    2.4  2  XhlA      Haemolysin XhlA


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.4   0.5   2.3e-20   1.4e-16       1      63 []      15      77 ..      15      77 .. 0.97
   2 ?   -2.8   0.2       1.2   7.1e+03      42      42 ..     189     189 ..     177     204 .. 0.49

  Alignments for each domain:
  == domain 1  score: 60.4 bits;  conditional E-value: 2.3e-20
                HHHHHHTSSTTG.-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskda.sedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63
                d+YeiLg++ +a se+e+++aYrk alkyHPDk  + +   ek++  ++Ay +Lsd++ ++qYD
  KHJ32694.1 15 DFYEILGIEFEAcSESELRRAYRKTALKYHPDKV-GINFDPEKYEIFQAAYHILSDSSLKSQYD 77
                79*******9977*********************.999999**********************9 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.2
                 H CS
        DnaJ  42 k 42 
                  
  KHJ32694.1 189 L 189
                 1 PP

>> DUF501  Protein of unknown function (DUF501)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.8     0.031   1.8e+02      58      98 ..      65     106 ..      55     119 .. 0.69
   2 ?   11.1   0.9   4.2e-05      0.25      39      71 ..     173     205 ..     152     235 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.031
      DUF501  58 klaedeelaqaleka.haeyaakReellteeerseleksees 98 
                  + +d++l+ ++++  ha+  ++R + + e +r++++++ e+
  KHJ32694.1  65 HILSDSSLKSQYDQFrHAKIQKQRANDMFEGKRRRMKEELEA 106
                 566788999999885488888999888877777777654443 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 4.2e-05
      DUF501  39 lvkavsrLEaeglvkaleeklaedeelaqalek 71 
                 +  +v+++E+++ +k+le+k++e ee++++++ 
  KHJ32694.1 173 AETKVKNMEDDEKIKRLEQKIREAEEAKAKYKL 205
                 6789*************************9964 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   1.5      0.09   5.4e+02       8      46 ..      99     138 ..      96     139 .. 0.87
   2 ?   10.2   3.6   0.00011      0.68       9      32 ..     173     198 ..     171     207 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.09
        XhlA   8 rietkldnlee.rvdkleekaaeaeekiknleedlkkles 46 
                 r++++l+  e+  v  ++++++e e++ ++l+ +lk+l +
  KHJ32694.1  99 RMKEELEAREKnGVPNVNKRSRENEARQMELQPELKRLAE 138
                 677788888888888999******************9976 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00011
        XhlA   9 ietkldnlee..rvdkleekaaeaee 32 
                  etk++n+e+  ++++le+k +eaee
  KHJ32694.1 173 AETKVKNMEDdeKIKRLEQKIREAEE 198
                 69********9999999999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1714  (0.0955993); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 1984.51
//
Query:       KHJ32695.1  [L=489]
Description: hypothetical protein EV44_g5909 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       979  (0.0546043); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3693.21
//
Query:       KHJ32696.1  [L=385]
Description: putative folate-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-07   28.7   0.0    5.1e-06   26.0   0.0    2.0  2  GCV_T     Aminomethyltransferase folate-binding domain


Domain annotation for each model (and alignments):
>> GCV_T  Aminomethyltransferase folate-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   2.9e-10   5.1e-06      48     137 ..      46     142 ..      42     150 .. 0.80
   2 ?   -0.4   0.0     0.034   6.2e+02      41      57 ..     328     344 ..     325     348 .. 0.87

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 2.9e-10
       GCV_T  48 mgkievsGpdaaalLqrlltndisklkpgkatytlllnedGgvidDlivarlde.......d.efllvvnaankekdlawlekaaekkdldvevedvt 137
                  + + +sGpd++++Lq ++t++i++ +  ++ y+++ln +G++++D++++  +e       +  +l+ v++++ e +++ +++++  ++++++  ++t
  KHJ32696.1  46 RSLLAISGPDSTRYLQGAITRNINSNS-SNGFYSVFLNAQGRILHDVFIYPFQEfegrykgEpGWLVEVDTKEVESLVKRIKRYRLDSKFEIRAVSQT 142
                 566789******************886.99********************999544444444489999999999999999999999555555555544 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.034
       GCV_T  41 glfDvShmgkievsGpd 57 
                 gl+ +S m++iev+G++
  KHJ32696.1 328 GLCRLSNMTEIEVEGEG 344
                 78889**********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2735.31
//
Query:       KHJ32697.1  [L=674]
Description: putative mrna decapping complex subunit 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.6e-28   96.7   0.4    1.8e-27   95.5   0.4    1.7  1  DCP2       Dcp2, box A domain
    9.6e-15   54.8   0.0    1.8e-14   53.9   0.0    1.4  1  NUDIX      NUDIX domain
  ------ inclusion threshold ------
      0.072   13.2   0.0        0.7   10.0   0.0    2.6  3  G-patch_2  G-patch domain


Domain annotation for each model (and alignments):
>> DCP2  Dcp2, box A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.5   0.4     3e-31   1.8e-27       1      83 []       9      92 ..       9      92 .. 0.94

  Alignments for each domain:
  == domain 1  score: 95.5 bits;  conditional E-value: 3e-31
                HHHHHHHHHHTTTS-HHHHTSHHHHHHHHHHHHHHHHHTHHHHTTTS----HHHHHHHHHCCSCCCHHC.CCHCHHHHHHHHHH CS
        DCP2  1 eiLddlavrFilnlpeeeleslerlffqleeAhWfYeDfvreknpklpslklkeFaeklfekcpllkkl.kedvdeileefkeY 83
                ++Lddl+vrF++n p+e+le++er++f +eeA+W+YeDf+r+++p+lps++lk F++++f++cpll ++ +++  ++++ f +Y
  KHJ32697.1  9 DWLDDLCVRFLMNGPKEDLETAERICFRVEEAQWYYEDFIRPQDPTLPSMTLKCFCDEIFAHCPLLLPFsQDHRMKAFDAFLSY 92
                68*****************************************************************99555556889999988 PP

>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.0     3e-18   1.8e-14       4     121 ..      97     217 ..      94     226 .. 0.76

  Alignments for each domain:
  == domain 1  score: 53.9 bits;  conditional E-value: 3e-18
                 EEEEEEEEETTSE.EEEEEESSSSTTTEESSEEECBTTS.HHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEEEEEEEE...EEEEEEEEE.EEECSGC CS
       NUDIX   4 ravgvvllnekge.vLlvrrskkpfpgWelPgGkvepgE.tpeeAArREleEEtGleaellellgrlhylapydgpygd...eheilyvfl.eevegel 96 
                 +  g+++ln++   ++lv+   k+ ++W++P Gk+ ++E ++ ++A+RE+ EEtG++       g ++  ++++ +  +   +   l+vf+  + + + 
  KHJ32697.1  97 PVRGAIMLNQNMDkLVLVKGW-KKGANWSFPRGKINKDEdDL-DCAIREVYEETGFDL---GEAGFIPADRQVKSIELNmheQQIRLFVFRgIPMNINF 190
                 56677766666444*******.99999************555.************966...44555556666666666655677777888899999999 PP

                 SSTSTTTEEEEEEEEHHHH..HHHHTH CS
       NUDIX  97 epndenevsevrwvpleel..lkekla 121
                 ep+ ++e+s++ w+ l +l   ++  a
  KHJ32697.1 191 EPKTRKEISAIDWWQLSDLpaFRKGKA 217
                 999****************54333333 PP

>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.19   1.1e+03      12      38 ..     326     352 ..     319     359 .. 0.74
   2 ?   10.0   0.0   0.00012       0.7       3      34 ..     353     384 ..     351     399 .. 0.80
   3 ?   -3.1   0.0       1.5   8.8e+03      50      59 ..     572     582 ..     560     594 .. 0.66

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.19
   G-patch_2  12 vPVeeFGaAlLrGMGWkegqgigknkk 38 
                  PV + G+AlL  +  k + +i++  +
  KHJ32697.1 326 PPVNDAGSALLLLLNSKTEAAINQRPN 352
                 599*******98888777777776655 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00012
   G-patch_2   3 easleeyeevPVeeFGaAlLrGMGWkegqgig 34 
                  +++++ e+vPV++ G+AlL  +  k++ +++
  KHJ32697.1 353 YSTQNKTENVPVSDNGSALLALLNSKASIAKN 384
                 578999**************877777665555 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 1.5
   G-patch_2  50 pg.rlGLGakp 59 
                 p    G+G k+
  KHJ32697.1 572 PNsEIGMGSKS 582
                 44455666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (674 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       772  (0.0430587); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.25s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 4608.61
//
Query:       KHJ32698.1  [L=158]
Description: putative wd repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-31  108.7   7.0    9.1e-31  106.1   7.0    2.1  1  SRP9-21   Signal recognition particle 9 kDa protein (SRP9)


Domain annotation for each model (and alignments):
>> SRP9-21  Signal recognition particle 9 kDa protein (SRP9)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.1   7.0   5.1e-35   9.1e-31       1      97 []       4     118 ..       4     118 .. 0.80

  Alignments for each domain:
  == domain 1  score: 106.1 bits;  conditional E-value: 5.1e-35
     SRP9-21   1 lktsqefleqsslLlearPsttrittkYsik...akkkkkkkkkkkaksekkaskas.................pprgtltlKtydpvsGvclkYkTnk 79 
                 ++tsqe+l+qs+lL++arP+ttrittkY+i+   ++  +++k+k+k+k   k++++s                 +p +tltlKtydpvsGv+lkY T+k
  KHJ32698.1   4 FATSQEWLDQSALLIKARPTTTRITTKYKIPnlsSD--SRSKRKRKDKVVVKDETKSlfdttktkknetsatsvSPPATLTLKTYDPVSGVTLKYITHK 100
                 579****************************65422..222222222222222222356778889999******************************* PP

     SRP9-21  80 aaevsRlisalgrlgrsm 97 
                 aaevsRl++++grlg  m
  KHJ32698.1 101 AAEVSRLVQIMGRLGNVM 118
                 ***************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1026  (0.0572257); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1219.83
//
Query:       KHJ32699.1  [L=153]
Description: hypothetical protein EV44_g1751 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.046   13.3   0.1      0.065   12.8   0.1    1.2  1  CAMP_factor  CAMP factor (Cfa)


Domain annotation for each model (and alignments):
>> CAMP_factor  CAMP factor (Cfa)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   3.6e-06     0.065      46      97 ..      81     129 ..      65     133 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.6e-06
  CAMP_factor  46 akelkealeaiakgkvtlydlksIlaRvellvdivdtiktaattLqdKvqkA 97 
                   ++l+++le++ +++++l  ++ I  Rv   ++i  ti+++a+ L  Kv++ 
   KHJ32699.1  81 NQQLSTKLEELTRNTIPLSTTEAIDQRV---AKITRTIHQTAEGLIPKVKPS 129
                  579************************8...577899***********9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       777  (0.0433376); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1122.75
//
Query:       KHJ32700.1  [L=424]
Description: putative rni-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-08   33.9   6.8      0.054   13.9   0.2    5.9  6  LRR_4     Leucine Rich repeats (2 copies)
     0.0013   18.6  11.5        2.8    8.2   0.2    6.5  8  LRR_6     Leucine Rich repeat
  ------ inclusion threshold ------
      0.012   16.0   6.6         96    4.2   0.0    5.9  5  LRR_1     Leucine Rich Repeat
        7.4    6.4  15.3        2.4    8.0   0.2    4.9  5  LRR_8     Leucine rich repeat


Domain annotation for each model (and alignments):
>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.77   3.5e+03      19      33 ..      33      47 ..      25      51 .. 0.76
   2 !    9.4   0.5   0.00031       1.4      18      33 ..      94     109 ..      81     124 .. 0.82
   3 ?    4.1   0.1     0.015        68       3      14 ..     129     140 ..     129     155 .. 0.82
   4 ?   -0.2   0.0      0.35   1.6e+03       3      15 ..     171     183 ..     163     188 .. 0.65
   5 ?    3.3   0.0     0.027   1.2e+02      10      36 ..     206     239 ..     197     247 .. 0.70
   6 !   13.9   0.2   1.2e-05     0.054       1      38 [.     284     324 ..     284     331 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.77
                HHH-TT--EEE-.-S CS
       LRR_4 19 leklpnLkeLdLsgN 33
                l+++++ +e+ L gN
  KHJ32700.1 33 LRQMDDVEEIRLQGN 47
                667888899999888 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00031
                 -HHH-TT--EEE-.-S CS
       LRR_4  18 lleklpnLkeLdLsgN 33 
                  l +lpnL+e++L++N
  KHJ32700.1  94 ALLSLPNLHEINLNDN 109
                 4446*********988 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.015
                 --EEE--SS--- CS
       LRR_4   3 LevLdLsnNqlt 14 
                 L++L L+nN l 
  KHJ32700.1 129 LQHLILNNNGLG 140
                 89999*999875 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.35
                 --EEE--SS---E CS
       LRR_4   3 LevLdLsnNqltd 15 
                 Le++ ++ N+l +
  KHJ32700.1 171 LETIICGRNRLES 183
                 5555566555554 PP

  == domain 5  score: 3.3 bits;  conditional E-value: 0.027
                 SS---E-S-...HH...H.-TT--EEE-.-S--- CS
       LRR_4  10 nNqltdipl...le...k.lpnLkeLdLsgNnli 36 
                 +N +++++    l+   k  +  ++LdL +N+++
  KHJ32700.1 206 QNGIRSLGIyvlLNdglKyAKEIRVLDLEDNTFL 239
                 5666666665554455543788999***999777 PP

  == domain 6  score: 13.9 bits;  conditional E-value: 1.2e-05
                 SS--EEE--SS---E-S-..HH.....H-TT--EEE-.-S----- CS
       LRR_4   1 pnLevLdLsnNqltdipl..le.....klpnLkeLdLsgNnlitd 38 
                 ++LevL+L+ Nql +  +  l      +lp L+++ + gN    +
  KHJ32700.1 284 QKLEVLHLQYNQLNSMVFekLVtvvrdSLPCLRKVEIEGN----K 324
                 69************99996633778868*********999....3 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.97   4.3e+03       6      18 ..      40      52 ..      39      57 .. 0.79
   2 ?    2.2   0.2     0.054   2.4e+02       3      16 ..      99     112 ..      97     113 .. 0.88
   3 !    6.4   0.0    0.0025        11       5      24 .]     129     148 ..     126     148 .. 0.91
   4 ?   -3.0   0.0       2.6   1.2e+04       3      20 ..     197     214 ..     196     217 .. 0.73
   5 ?    2.2   0.1     0.053   2.4e+02       6      24 .]     229     247 ..     227     247 .. 0.84
   6 ?   -0.3   0.2      0.33   1.5e+03       5      19 ..     256     270 ..     254     275 .. 0.86
   7 !    8.2   0.2   0.00063       2.8       1      16 [.     282     297 ..     282     298 .. 0.91
   8 ?   -0.4   0.0      0.36   1.6e+03       3      15 ..     313     325 ..     311     328 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.97
       LRR_6  6 teLdLsgNdIgDe 18
                +e  L+gN +g e
  KHJ32700.1 40 EEIRLQGNTLGVE 52
                577899**99966 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.054
       LRR_6   3 thLteLdLsgNdIg 16 
                 ++L e +L++N +g
  KHJ32700.1  99 PNLHEINLNDNAFG 112
                 79*********987 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0025
       LRR_6   5 LteLdLsgNdIgDeGaeaLa 24 
                 L++L L+ N++g e +++ a
  KHJ32700.1 129 LQHLILNNNGLGPESGIKVA 148
                 89************999865 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 2.6
       LRR_6   3 thLteLdLsgNdIgDeGa 20 
                 t+++++ +  N+I   G+
  KHJ32700.1 197 TKVKKVKMVQNGIRSLGI 214
                 567778888899987775 PP

  == domain 5  score: 2.2 bits;  conditional E-value: 0.053
       LRR_6   6 teLdLsgNdIgDeGaeaLa 24 
                 + LdL +N + ++G +aLa
  KHJ32700.1 229 RVLDLEDNTFLNKGSSALA 247
                 89******99888877776 PP

  == domain 6  score: -0.3 bits;  conditional E-value: 0.33
       LRR_6   5 LteLdLsgNdIgDeG 19 
                 L+eL + ++ +g +G
  KHJ32700.1 256 LQELGIGDCMLGTKG 270
                 899******999998 PP

  == domain 7  score: 8.2 bits;  conditional E-value: 0.00063
       LRR_6   1 snthLteLdLsgNdIg 16 
                 +n++L+ L+L++N+++
  KHJ32700.1 282 KNQKLEVLHLQYNQLN 297
                 69***********985 PP

  == domain 8  score: -0.4 bits;  conditional E-value: 0.36
       LRR_6   3 thLteLdLsgNdI 15 
                 ++L+++++ gN++
  KHJ32700.1 313 PCLRKVEIEGNKF 325
                 78*********97 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.2     0.087   3.9e+02       1      12 [.     100     111 ..     100     127 .. 0.73
   2 ?    3.4   0.0     0.038   1.7e+02       2      12 ..     129     139 ..     128     153 .. 0.84
   3 ?    4.2   0.0     0.021        96       3      21 ..     229     247 ..     227     249 .. 0.85
   4 ?   -0.9   0.0         1   4.5e+03       2      17 ..     256     271 ..     255     278 .. 0.77
   5 ?    3.8   0.1     0.027   1.2e+02       1      12 [.     285     296 ..     285     331 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.087
       LRR_1   1 nLrhLdLsnnpl 12 
                 nL +++L++n +
  KHJ32700.1 100 NLHEINLNDNAF 111
                 8********986 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.038
       LRR_1   2 LrhLdLsnnpl 12 
                 L+hL L+nn l
  KHJ32700.1 129 LQHLILNNNGL 139
                 9********98 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.021
       LRR_1   3 rhLdLsnnpllglppnsfq 21 
                 r+LdL++n +l+++++++ 
  KHJ32700.1 229 RVLDLEDNTFLNKGSSALA 247
                 89*******9999998876 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 1
       LRR_1   2 LrhLdLsnnpllglpp 17 
                 L++L ++++ l+ +++
  KHJ32700.1 256 LQELGIGDCMLGTKGN 271
                 8999999999965555 PP

  == domain 5  score: 3.8 bits;  conditional E-value: 0.027
       LRR_1   1 nLrhLdLsnnpl 12 
                 +L++L+L +n+l
  KHJ32700.1 285 KLEVLHLQYNQL 296
                 79********98 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.8   7.8e+03      48      60 ..      36      48 ..      33      49 .. 0.57
   2 ?    3.7   0.8     0.012        53      22      35 ..      96     109 ..      89     113 .. 0.57
   3 ?    0.4   0.2      0.13   5.6e+02      51      60 ..     129     138 ..     121     140 .. 0.62
   4 ?    0.1   0.1      0.16   7.1e+02      26      36 ..     227     237 ..     214     248 .. 0.69
   5 ?    8.0   0.2   0.00054       2.4      23      46 ..     282     302 ..     280     325 .. 0.71

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.8
                --S-.EEE--SS- CS
       LRR_8 48 LpsLrsLdLsgNr 60
                +  ++++ L+gN 
  KHJ32700.1 36 MDDVEEIRLQGNT 48
                4555666666664 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.012
                 TT-TT--EEE--SS CS
       LRR_8  22 kglsnLkvLdLsnN 35 
                  +l+nL +++L++N
  KHJ32700.1  96 LSLPNLHEINLNDN 109
                 34555555555555 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.13
                 -.EEE--SS- CS
       LRR_8  51 LrsLdLsgNr 60 
                 L++L L++N 
  KHJ32700.1 129 LQHLILNNNG 138
                 4444444444 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.16
                 T--EEE--SS- CS
       LRR_8  26 nLkvLdLsnNl 36 
                   +vLdL +N+
  KHJ32700.1 227 EIRVLDLEDNT 237
                 45666666663 PP

  == domain 5  score: 8.0 bits;  conditional E-value: 0.00054
                 T-TT--EEE--SS---GGGGGGGT CS
       LRR_8  23 glsnLkvLdLsnNllttlspgafs 46 
                 ++++L+vL+L +N+l+++   +f+
  KHJ32700.1 282 KNQKLEVLHLQYNQLNSM---VFE 302
                 5789***********986...333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       805  (0.0448993); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 3225.65
//
Query:       KHJ32701.1  [L=744]
Description: putative dolichyl-phosphate-mannose-protein mannosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.2e-84  281.0  18.3    8.2e-84  281.0  18.3    2.1  2  PMT       Dolichyl-phosphate-mannose-protein mannosyltransfer
      3e-64  216.3  17.8      3e-64  216.3  17.8    2.4  3  PMT_4TMC  C-terminal four TMM region of protein-O-mannosyltra
    1.4e-37  129.3   2.5    2.5e-37  128.6   2.5    1.3  1  MIR       MIR domain
  ------ inclusion threshold ------
        4.1    6.4   5.2       0.95    8.5   1.6    1.7  2  DUF973    Protein of unknown function (DUF973)


Domain annotation for each model (and alignments):
>> PMT  Dolichyl-phosphate-mannose-protein mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  281.0  18.3   1.8e-87   8.2e-84       1     244 [.      67     310 ..      67     311 .. 0.99
   2 ?   -3.9   5.2       1.8   7.9e+03     188     240 ..     614     670 ..     607     673 .. 0.65

  Alignments for each domain:
  == domain 1  score: 281.0 bits;  conditional E-value: 1.8e-87
         PMT   1 viltllallirlwrlslpnsvvfdevhfgkfasdYlehsffmdvhpplgkmllalggyLagkdgnftfesigaeyypenvpyvslRlfsallgslivpl 99 
                 v+lt+la+++rl++++l + v++de+hfgkf+s Y++++f++dvhpplgk l++++g Lag++g+++f+s   e+yp++ +y ++R+f+a++g+++vpl
  KHJ32701.1  67 VVLTFLAFFTRLYKIGLSPIVTWDEAHFGKFGSHYIKREFYFDVHPPLGKILVGFSGFLAGYNGTYEFKSG--EKYPAELNYTFMRAFNAFFGAVCVPL 163
                 579********************************************************************..9************************* PP

         PMT 100 vyltllelgfskltallaallvllenslitlsryilldspLlfftllsmyclvkfe..rkapfsrswwlwllltgvalglavsvKwvglftvllvglll 196
                 +y+t++el f++ ++++ al+vl ens+ t+sr+illds+Ll ft ++++c+ kf+  r++ fs +w+ wl+ltg+++g++ svKwvglf ++lvg+++
  KHJ32701.1 164 AYFTARELRFKQPAVWFVALMVLCENSYTTISRFILLDSMLLCFTFTTVLCWAKFHrlRDQSFSIEWFSWLFLTGLSIGCVTSVKWVGLFCTALVGIYT 262
                 **********************************************************99*************************************** PP

         PMT 197 iwelwqllgdkslllksivkhllaralaliviPvtlylavftvhfwll 244
                 + +lw+++gd  +++++ + hl+ar++ liv+P+++y+++f +hf +l
  KHJ32701.1 263 AEDLWNKFGDTMMPKVEFIAHLIARVFGLIVLPIMIYMLFFVLHFAIL 310
                 *********************************************987 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 1.8
         PMT 188 tvllvgllliwelwqllgdkslllksi....vkhllaralaliviPvtlylavftvh 240
                 + + +++++    wq+ + ++++++        +++    +l  +P++  + v +vh
  KHJ32701.1 614 IAVTLLIIWYLLRWQRGYSDLMPTDIDhlhyTAIYFLIGWILHYLPFVAMARVTYVH 670
                 334555555566677778999999844655544445555567788888888888887 PP

>> PMT_4TMC  C-terminal four TMM region of protein-O-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.5      0.59   2.7e+03     159     184 ..     193     218 ..     154     235 .. 0.56
   2 ?   -2.1   0.3      0.54   2.4e+03     128     143 ..     286     301 ..     250     320 .. 0.55
   3 !  216.3  17.8   6.7e-68     3e-64       1     199 []     543     740 ..     543     740 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.59
    PMT_4TMC 159 livvvvllvlviavFiffspltyGlp 184
                 +i  ++ll +++++F f   l+++  
  KHJ32701.1 193 TISRFILLDSMLLCFTFTTVLCWAKF 218
                 33333444455555555555555433 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.54
    PMT_4TMC 128 Allfailllaalldfl 143
                 A +f +++l +++ +l
  KHJ32701.1 286 ARVFGLIVLPIMIYML 301
                 2223333222222222 PP

  == domain 3  score: 216.3 bits;  conditional E-value: 6.7e-68
    PMT_4TMC   1 Flkkflelqkamltsnnaltes....hpyaSepyeWplllrgisywtkneekkqiyllGNpvlwwlstiallvfvllllalllrrqrgvkdl.eeeetr 94 
                 F+++f++l++am++snnal+++    +++aS+ ++Wp+l+ g++++++++++ +++llGNp+++w sti+l++++ll++++llr+qrg++dl +++ ++
  KHJ32701.1 543 FFQDFIHLNVAMMSSNNALVPDpdkqDDLASKFWQWPILHVGLRMCSWDDSTIKYFLLGNPLVYWCSTISLIAVTLLIIWYLLRWQRGYSDLmPTDIDH 641
                 9********************559********************************************************************7778888 PP

    PMT_4TMC  95 llnsglflllgwalhylPfflmgRvlflhhYlpAllfailllaalldfllkslkkslkkkklvklivvvvllvlviavFiffspltyGlpgtseevkkl 193
                 l+++++++l+gw+lhylPf+ m+Rv+++hhY+pAl+f+il l++l+d++l+ ++++      +++i++++l++ +i+ +i+f+p+++G+ g+++++++l
  KHJ32701.1 642 LHYTAIYFLIGWILHYLPFVAMARVTYVHHYYPALYFSILNLGFLTDWILRDRQAR------IQYIIYGILYTTTIGLYIYFMPISWGMVGPNKKYRYL 734
                 *************************************************9555544......69*********************************** PP

    PMT_4TMC 194 kwlssW 199
                 kw+++W
  KHJ32701.1 735 KWFETW 740
                 ****** PP

>> MIR  MIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.6   2.5   5.5e-41   2.5e-37      11     184 ..     358     519 ..     357     532 .. 0.97

  Alignments for each domain:
  == domain 1  score: 128.6 bits;  conditional E-value: 5.5e-41
         MIR  11 LfHshqdeyltiseqqqkqevflritlypsadaanssraLWeievvqkd.....awrgglikwgkvyRlkHlaTgryLaseeekksplseseddqkevs 104
                 L Hsh ++y+ +s qqq       +t+y+++d++n+    W i + +++     +  ++++++g+v+R+ H +Tgr+L+s+e  ++p++   +++ evs
  KHJ32701.1 358 LLHSHIQTYPSGSRQQQ-------VTCYHHKDNNNE----WWIYPNRSQpnfnsEAAIQFVSNGDVLRFIHSQTGRNLHSHEI-QAPIT---KAHREVS 441
                 78***************.......************....********998887789**************************.9***9...67***** PP

         MIR 105 ayglegfegdnDkveifekksttgmksaklvprdsyvrlqHvvtgcwLhstsvklkkekfekvqqkvicakekedkeala 184
                 +yg+ ++ +d+D+ +i  +++t   + +k+++ ++ +r++H v gc+L++ +++l++++f+  q +v+c k+++++++++
  KHJ32701.1 442 CYGNTTIGDDKDHWKIEVLRDTVSSEHSKVRTLTTSFRIRHSVLGCYLRAGNINLPQWGFK--QIEVTCDKKNNPRDKFT 519
                 *************************************************************..**************997 PP

>> DUF973  Protein of unknown function (DUF973)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.41   1.9e+03      56      72 ..     285     301 ..     247     326 .. 0.59
   2 ?    8.5   1.6   0.00021      0.95      64     124 ..     611     675 ..     596     717 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.41
      DUF973  56 lllliaaiiliiiasvl 72 
                 ++ +++ i+l i+ ++l
  KHJ32701.1 285 IARVFGLIVLPIMIYML 301
                 22222222222211111 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00021
      DUF973  64 iliiiasvllilgllkirsgfsiLsstgrdvgiGitgltliligaiiiiigvilaivsll.......s 124
                 i+ i + +l+i +ll+ ++g+s+L  +  d+    + ++ +lig i+  + ++ a++ +         
  KHJ32701.1 611 ISLIAVTLLIIWYLLRWQRGYSDL--MPTDIDHLHYTAIYFLIGWILHYLPFV-AMARVTyvhhyypA 675
                 555666677777888*********..788999999*************99998.44444434444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (744 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       723  (0.0403257); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.41
# Mc/sec: 5393.50
//
Query:       KHJ32702.1  [L=236]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.20s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1937.20
//
Query:       KHJ32703.1  [L=217]
Description: hypothetical protein EV44_g4042 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.18   11.6   0.0       0.23   11.3   0.0    1.2  1  Glyco_tranf_2_3  Glycosyltransferase like family 2


Domain annotation for each model (and alignments):
>> Glyco_tranf_2_3  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.3e-05      0.23      89     132 ..      11      60 ..       2     114 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.3e-05
  Glyco_tranf_2_3  89 dlvllvDdDtvvePdtlkrllqff.ltpkvgavg.tpvflln....rstl 132
                      + +llvD+D+  ++ +l ++++++   + ++av+ + ++ +n    ++++
       KHJ32703.1  11 EQILLVDADCFPSDFYLISFVTILlSGKAWDAVQdGVKRKNNnplnPDSW 60 
                      569*********************9999******7666543312113344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       553  (0.0308439); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1596.83
//
Query:       KHJ32704.1  [L=245]
Description: hypothetical protein EV44_g3989 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1087  (0.060628); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1894.27
//
Query:       KHJ32705.1  [L=304]
Description: hypothetical protein EV44_g3641 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.04   14.1   0.2       0.32   11.2   0.1    2.2  2  DUF3920   Protein of unknown function (DUF3920)
      0.053   13.5   0.1       0.11   12.6   0.1    1.5  1  RNR_N     Ribonucleotide reductase N-terminal


Domain annotation for each model (and alignments):
>> DUF3920  Protein of unknown function (DUF3920)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0     0.092   8.2e+02       2      38 ..     107     145 ..     106     153 .. 0.77
   2 ?   11.2   0.1   3.6e-05      0.32       6      51 ..     191     237 ..     184     260 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.092
     DUF3920   2 ldselkwdlkrlkkdv.fsllekakip.vifcdtcdank 38 
                 l++ +kw++k+ +  + f+ l+   +  v+f d   an+
  KHJ32705.1 107 LNERIKWQIKHKHRGLkFTKLDFDSVQiVVFADPSFANN 145
                 788999**9987776659999988665267999887776 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 3.6e-05
     DUF3920   6 lkwdlkrlkkdvfsllekakipvifc.dtcdankvlsalgeeeeefl 51 
                 l +d+  + k  f ++ k++ip+++c d+    + l++lg   e+ l
  KHJ32705.1 191 LGFDVGAVIKLTFQCILKREIPLVLCtDSHSLYECLVKLGSTSEKRL 237
                 56899999999***************677788999999998776655 PP

>> RNR_N  Ribonucleotide reductase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.2e-05      0.11      23      55 ..      86     118 ..      66     135 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.2e-05
       RNR_N  23 keAleaYlkehvnpntvkfesleekldyLvend 55 
                  e le++  + +np    f+ l+e++++ ++++
  KHJ32705.1  86 CEKLEEFAAQAINPTLHDFKALNERIKWQIKHK 118
                 56689***********************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2426.91
//
Query:       KHJ32706.1  [L=440]
Description: putative c2h2 transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-06   27.2  11.6     0.0019   18.6   1.7    2.6  2  zf-C2H2    Zinc finger, C2H2 type
    0.00017   21.8   4.1    0.00017   21.8   4.1    3.0  3  zf-H2C2_2  Zinc-finger double domain
    0.00061   20.4  10.6       0.16   12.9   2.3    2.8  2  zf-C2H2_4  C2H2-type zinc finger
  ------ inclusion threshold ------
      0.028   14.7   0.1       0.67   10.2   0.0    2.3  2  DUF1059    Protein of unknown function (DUF1059)
       0.14   12.6   1.7        9.9    6.7   0.3    2.6  2  zf-met     Zinc-finger of C2H2 type


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   1.7   5.2e-07    0.0019       6      23 .]      92     109 ..      84     109 .. 0.88
   2 !   13.2   2.7   2.6e-05     0.094       5      23 .]     118     137 ..     115     137 .. 0.93

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 5.2e-07
                 TTEEESSHHHHHHHHHCC CS
     zf-C2H2   6 CgksFkrksnLkrHirtH 23 
                 C+ sF+r+++L rHir+H
  KHJ32706.1  92 CNLSFTRSEHLARHIRKH 109
                 *****************9 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 2.6e-05
                 TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   5 dCgksFkrksnLkrHirt.H 23 
                 +C+++F+r +nL++H ++ H
  KHJ32706.1 118 HCNRRFSRLDNLRQHAQSiH 137
                 7**************99988 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.9       2.1   7.5e+03      13      25 ..      82      97 ..      74      98 .. 0.65
   2 !   21.8   4.1   4.8e-08   0.00017       1      18 [.     101     118 ..     101     125 .. 0.86
   3 ?   -0.9   0.0      0.77   2.8e+03       1      12 [.     128     140 ..     128     142 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.1
   zf-H2C2_2 13 kpyeCp...lCdkaFk 25
                 ++ C+    C+ +F+
  KHJ32706.1 82 QIFYCSdfpPCNLSFT 97
                3688887777888876 PP

  == domain 2  score: 21.8 bits;  conditional E-value: 4.8e-08
   zf-H2C2_2   1 nLrrHirkHtgekpyeCp 18 
                 +L rHirkHtge+p++C 
  KHJ32706.1 101 HLARHIRKHTGERPFQCH 118
                 699**************4 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.77
   zf-H2C2_2   1 nLrrHirk.Htge 12 
                 nLr+H  + H +e
  KHJ32706.1 128 NLRQHAQSiHQNE 140
                 89***88559876 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   1.4   0.00011       0.4       1      23 [.      84     109 ..      84     110 .. 0.89
   2 !   12.9   2.3   4.5e-05      0.16       1      24 []     115     137 ..     115     137 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00011
   zf-C2H2_4   1 fkCpi...CgksFsskkaLlrHlkth 23 
                 f+C+    C+ sF+++++L rH+++h
  KHJ32706.1  84 FYCSDfppCNLSFTRSEHLARHIRKH 109
                 67777788*****************9 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 4.5e-05
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkthH 24 
                 f+C +C+++Fs+ ++L++H ++ H
  KHJ32706.1 115 FQC-HCNRRFSRLDNLRQHAQSIH 137
                 788.***************99877 PP

>> DUF1059  Protein of unknown function (DUF1059)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.077   2.8e+02       4      33 ..      84     110 ..      82     113 .. 0.82
   2 ?   10.2   0.0   0.00019      0.67      27      50 ..     127     150 ..     126     154 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.077
     DUF1059   4 fkCgDvgpdCgfeitaeteeEvlrkvaeHa 33 
                 f+C D+ p C++++  +  e + r++++H+
  KHJ32706.1  84 FYCSDF-PPCNLSF--TRSEHLARHIRKHT 110
                 999997.67***99..67778999999996 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00019
     DUF1059  27 rkvaeHakaaHglteippelveki 50 
                  ++++Ha++ H+ +eip++ ++ i
  KHJ32706.1 127 DNLRQHAQSIHQNEEIPEDSLALI 150
                 5789***************98766 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.1     0.014        51       6      21 ..      92     107 ..      90     109 .. 0.87
   2 ?    6.7   0.3    0.0028       9.9       6      22 ..     119     135 ..     118     135 .. 0.96

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.014
      zf-met   6 CnvtfnsesqlksHlq 21 
                 Cn +f+   +l  H +
  KHJ32706.1  92 CNLSFTRSEHLARHIR 107
                 **************54 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0028
      zf-met   6 CnvtfnsesqlksHlqG 22 
                 Cn++f+   +l++H q+
  KHJ32706.1 119 CNRRFSRLDNLRQHAQS 135
                 **************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 3509.14
//
Query:       KHJ32707.1  [L=160]
Description: putative 60s ribosomal protein l21 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-47  158.9   6.3    5.3e-47  157.8   4.3    1.9  2  Ribosomal_L21e  Ribosomal protein L21e
  ------ inclusion threshold ------
      0.088   12.7   0.1      0.088   12.7   0.1    2.6  3  DUF5486         Family of unknown function (DUF5486)
       0.55   10.6   2.4        3.7    7.9   2.4    2.4  1  SH3_15          Mind bomb SH3 repeat domain


Domain annotation for each model (and alignments):
>> Ribosomal_L21e  Ribosomal protein L21e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.8   4.3   8.9e-51   5.3e-47       1     100 [.       1     100 [.       1     101 [. 0.98
   2 ?    0.9   0.0     0.067     4e+02      32      47 ..     118     133 ..     102     141 .. 0.69

  Alignments for each domain:
  == domain 1  score: 157.8 bits;  conditional E-value: 8.9e-51
                     X--S-STTTT-TTTTS--GGG-SS--SHHHH----TT-EEEE---TT--SS---GGGTT-EEEE..EEEETTEEEEEEEETTE..EEEEEE-GGG CS
  Ribosomal_L21e   1 mknskglrrgtrklfskkfrkkgvpplstylreykkGdkVdikidpsvqkgmphkryhGktgrvynvtkravgvivnkkvggkileKriivrieh 95 
                     m +++glr+gtr++fs+kfr+kg+++lstyl+++k+Gd+Vdik++++vqkgmphk+yhGktg++ynvtk+avgvi++kkv+++++eKr+++rieh
      KHJ32707.1   1 MGHPAGLRAGTRYAFSRKFREKGMIRLSTYLQQFKVGDIVDIKANGAVQKGMPHKVYHGKTGVIYNVTKNAVGVIIYKKVKHRYIEKRVNLRIEH 95 
                     899******************************************************************************************** PP

                     EEE-- CS
  Ribosomal_L21e  96 lkksk 100
                     ++ s+
      KHJ32707.1  96 VSLSR 100
                     *9997 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.067
                     ----TT-EEEE---TT CS
  Ribosomal_L21e  32 reykkGdkVdikidps 47 
                     +  ++G +V++k +p 
      KHJ32707.1 118 KSKEEGTIVHLKRQPL 133
                     4567888888888875 PP

>> DUF5486  Family of unknown function (DUF5486)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.2       2.1   1.2e+04      10      15 ..      17      22 ..      12      27 .. 0.53
   2 ?    2.8   0.2     0.018   1.1e+02      29      41 ..      71      83 ..      67      87 .. 0.86
   3 ?   12.7   0.1   1.5e-05     0.088       9      35 ..      98     127 ..      92     133 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 2.1
     DUF5486 10 rssree 15
                r  re 
  KHJ32707.1 17 RKFREK 22
                334444 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.018
     DUF5486 29 aeGtitykrikfk 41
                a G i yk++k +
  KHJ32707.1 71 AVGVIIYKKVKHR 83
                789*******975 PP

  == domain 3  score: 12.7 bits;  conditional E-value: 1.5e-05
     DUF5486   9 irssreemmrrfk...eahdkakaeGtity 35 
                 +  sree ++r k   e   k+k eGti +
  KHJ32707.1  98 LSRSREEFVKRVKanaELKKKSKEEGTIVH 127
                 5679********965566789******975 PP

>> SH3_15  Mind bomb SH3 repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   2.4   0.00062       3.7       1      46 [.      34      72 ..      34     130 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00062
      SH3_15  1 fevGDwVrvkddvekvkklqeghggWsgamtlgsvGtVlkvdadgd 46
                f+vGD+V +k +    k + +       + ++g++G++ +v+++  
  KHJ32707.1 34 FKVGDIVDIKANGAVQKGMPH-------KVYHGKTGVIYNVTKNAV 72
                899999999994333333322.......225888888888886644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1022  (0.0570026); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1253.26
//
Query:       KHJ32708.1  [L=192]
Description: putative 40s ribosomal protein s9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.7e-12   46.2   0.7    2.7e-12   46.2   0.7    2.6  3  S4            S4 domain
    4.7e-06   27.4   0.1      9e-06   26.5   0.1    1.5  1  Ribosomal_S4  Ribosomal protein S4/S9 N-terminal domain


Domain annotation for each model (and alignments):
>> S4  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1      0.14   1.3e+03      16      22 ..      51      57 ..      43      59 .. 0.75
   2 ?   -2.0   0.1      0.35   3.2e+03       1       8 [.      89      96 ..      89      99 .. 0.82
   3 !   46.2   0.7     3e-16   2.7e-12       1      44 [.     105     148 ..     105     151 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.14
                HHHHHHH CS
          S4 16 rreArql 22
                rr Arql
  KHJ32708.1 51 RRAARQL 57
                8999998 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.35
                EEHHHHHH CS
          S4  1 rRLdkvla 8 
                + Ld vla
  KHJ32708.1 89 MKLDYVLA 96
                78****98 PP

  == domain 3  score: 46.2 bits;  conditional E-value: 3e-16
                 EEHHHHHHHTTSSSSHHHHHHHHHTTTEEETTEEE--TT-EE-T CS
          S4   1 rRLdkvlarlglassrreArqlIehGrVlVNGkvvkdpsyrVkp 44 
                 rRL++ +++lgla+s+ +Ar lI++++++V +++v+ ps++V+ 
  KHJ32708.1 105 RRLQTCVYKLGLAKSIHHARVLIRQKHIRVGKQIVNVPSFIVRL 148
                 8*****************************************85 PP

>> Ribosomal_S4  Ribosomal protein S4/S9 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.1     1e-09     9e-06      36      81 ..      14      60 ..       3     104 .. 0.84

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 1e-09
                  --CHCH.HHHHHHHHHHHHT-S.HHHHHHHHHHHHHCCSHHHHHHHHH CS
  Ribosomal_S4 36 lseYgk.qlrekqklkrrYgll.ekqfrryfkearrirGktgenLlql 81
                    ++++ +l+ + kl ++Ygl+ +++++r++  +++ir + +++Ll+l
    KHJ32708.1 14 RRPFESaRLDSELKLVGEYGLRnKREVWRVQLTLSKIR-RAARQLLTL 60
                  5689999*******************************.*******94 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1394.14
//
Query:       KHJ32709.1  [L=110]
Description: hypothetical protein EV44_g3397 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       267  (0.0148921); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 886.90
//
Query:       KHJ32710.1  [L=355]
Description: putative type 2a phosphatase-associated protein 42 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   6.4e-103  344.2   6.9   7.2e-103  344.0   6.9    1.0  1  TAP42       TAP42-like family
     0.0016   18.6   0.1     0.0085   16.3   0.1    2.3  1  DASH_Dad1   DASH complex subunit Dad1
  ------ inclusion threshold ------
      0.083   12.6   1.1       0.15   11.8   0.3    1.8  2  Hs1pro-1_N  Hs1pro-1 N-terminus


Domain annotation for each model (and alignments):
>> TAP42  TAP42-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  344.0   6.9  1.2e-106  7.2e-103       2     318 ..       7     344 ..       6     345 .. 0.96

  Alignments for each domain:
  == domain 1  score: 344.0 bits;  conditional E-value: 1.2e-106
                 HHHHHHHHHHHHH.HHC-S-TTSHHHHHHHHHHHHHHHHHHHHHHHHTTT-SSS-CCCS-TTTGGGGGHHHHHHHHHCT---..GGGHHHHHHHHHHHH CS
       TAP42   2 selfekalklyeeslessapsnseeyqekvkkaiaalekaaklvsqlslFSsNEsledistsdLkyLlvpyylaeltqkiqssdpeeRlevLkrakeyy 100
                 + lf+ +++ ++ +++++ +sns+eyq kv++aia++e++ kl+++lslFS+NE+led++ +dL+yL++++ lael+++i++   ++R++ ++ra+++y
  KHJ32710.1   7 KTLFNLGENYRK-QIDTTWDSNSTEYQLKVSNAIASYEECLKLAERLSLFSPNETLEDLTANDLQYLSINFRLAELITRINH---KDRKSLIQRARNLY 101
                 678998999888.7********************************************************************...************** PP

                 HHHHCCHHHTTS....................S----.....-SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-S-HHHHHHHHHHHHHHHHHHHH CS
       TAP42 101 eeFlkrlesyellseeekklleeleeeekyseseeef.....sdaaarReeKIarfkeeKeleekleelkkrveseeeDeeevRelylaqlklavlkaf 194
                 e+Fl++l++ye+ls +ekkl+      e y es+++f     sd+ arRe+KIa++k eKel++k+e ++++  + e+Dee+ Re++la+++l ++++f
  KHJ32710.1 102 ENFLSLLQQYEILSGREKKLY------ESYVESPTTFstilcSDPIARRETKIANYKLEKELKKKIEFFSQNATNFEDDEETIREFHLANISLNTHNTF 194
                 *********************......666667777777788********************************************************* PP

                 HHHHHHHHHHHHHC...--XXXXX..............................XXXXXXX..XXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXX CS
       TAP42 195 qelesieqEleiLeaapkeeeqee..............................skakkgpllskqgkplrPftilstReelqkkVfgpghslPtMtvd 263
                 q+les+++Ele+L +ap+ + ++                                 +k+ p+ls++gkplrPft+l++R++l++ Vf+pgh+lPtMt+d
  KHJ32710.1 195 QALESLNRELEVLMMAPPSPISSVeslwqdhreridlrnrndtssdrldrlddsLLTKNLPILSSSGKPLRPFTLLDSRQALKRDVFRPGHNLPTMTID 293
                 *****************98866559****************************97799***************************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXX....XXXXXXXXXXXXXXXXXX CS
       TAP42 264 EyleeevrrGniiegggeasakeeeeeedeeedeekadeeetqkarawDefkddn 318
                 Eyle+e++rG+iieggg+asa + e+   +e+++e  d +et+kar+wDefk++n
  KHJ32710.1 294 EYLEQERARGGIIEGGGPASAVKVEP---DEDNYETGD-QETMKARQWDEFKESN 344
                 **************************...88999****.***************9 PP

>> DASH_Dad1  DASH complex subunit Dad1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   1.4e-06    0.0085       5      50 ..     178     224 ..     176     228 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.4e-06
   DASH_Dad1   5 qRdrliqeIaesmeevlnnlnaLNRsLEevi.avgkeFesVaaLWss 50 
                  R+ ++++I+ + ++ ++ l+ LNR+LE ++ a  + ++sV++LW++
  KHJ32710.1 178 IREFHLANISLNTHNTFQALESLNRELEVLMmAPPSPISSVESLWQD 224
                 5999************************8751556889999999986 PP

>> Hs1pro-1_N  Hs1pro-1 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   2.6e-05      0.15      27      95 ..      17      83 ..       1     131 [. 0.76
   2 ?   -0.9   0.0       0.2   1.2e+03      93     147 ..     135     189 ..     101     208 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.6e-05
  Hs1pro-1_N 27 hvsipspvr..ssdisasasaacsaYeqylrLpeLrklwksrefPeWknepllkPaLqaLeitfRlvsvvl 95
                +++i ++    s++ +   s a+++Ye++l+L+e   l++    P+ + e l    Lq L i fRl  ++ 
  KHJ32710.1 17 RKQIDTTWDsnSTEYQLKVSNAIASYEECLKLAERLSLFS----PNETLEDLTANDLQYLSINFRLAELIT 83
                4555554442245556667789************998886....88899****************987664 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.2
  Hs1pro-1_N  93 vvlsDprpYinrrewkRRlesLatkqieliailcedeeeeeetrgtaPvadlsas 147
                 + +sDp    + +  + +le    k+ie+ +    + e++eet+ +  +a++s++
  KHJ32710.1 135 ILCSDPIARRETKIANYKLEKELKKKIEFFSQNATNFEDDEETIREFHLANISLN 189
                 5567776666666667777777778888877777666666666666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.20s 00:00:00.64 Elapsed: 00:00:00.34
# Mc/sec: 3132.96
//
Query:       KHJ32711.1  [L=1591]
Description: putative dicer-like protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.6e-41  139.7   0.0    2.1e-19   70.1   0.1    2.9  2  Ribonuclease_3   Ribonuclease III domain
    9.5e-22   77.5   0.5      1e-09   38.6   0.0    3.9  4  Ribonucleas_3_3  Ribonuclease-III-like
    8.6e-20   70.7   0.4    2.2e-18   66.2   0.0    3.2  4  Dicer_dimer      Dicer dimerisation domain
    3.9e-16   59.4   0.2    1.4e-15   57.6   0.2    2.0  1  Helicase_C       Helicase conserved C-terminal domain
    1.8e-13   50.9   0.1    1.8e-13   50.9   0.1    2.2  2  ResIII           Type III restriction enzyme, res subunit
    6.5e-12   45.6   0.0    1.8e-11   44.1   0.0    1.7  1  DEAD             DEAD/DEAH box helicase
    5.9e-06   26.9   0.7       0.06   14.1   0.1    3.0  2  dsrm             Double-stranded RNA binding motif


Domain annotation for each model (and alignments):
>> Ribonuclease_3  Ribonuclease III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.1   0.1   8.3e-23   2.1e-19       1     104 [.    1141    1248 ..    1141    1249 .. 0.95
   2 !   66.5   0.0     1e-21   2.6e-18       1     104 [.    1338    1463 ..    1338    1464 .. 0.87

  Alignments for each domain:
  == domain 1  score: 70.1 bits;  conditional E-value: 8.3e-23
                      HHHHHHHHHHHHHHHHHHHHHHCTTSSHHHHHHHHHHHTSHHHHHHHHHCTTCHCCHCHH..................HHCCSTTCHCTSHHH CS
  Ribonuclease_3    1 erLeflGDavlklaittylfetypdahegrlsklrsklvsnenlarlakklglpkflrasefdpprnwlppgy....klsddekedddadkvl 89  
                      erLeflGD +lk+a++  l+  +p+ +e  ++  r  l+sn+nl   a kl+l++++r+++f+ + +  + +     k+ + ++++d adk++
      KHJ32711.1 1141 ERLEFLGDCFLKMATSISLYGLQPENNEFAYHVDRMLLTSNKNLRDNAIKLKLYEYIRSQSFNRRAWYPEGLVllrgKAAKVKDSHDLADKTI 1233
                      8*********************************************************999998877776665****9*************** PP

                      HHHHHHHHHHHHHHC CS
  Ribonuclease_3   90 advvEAliGaiylds 104 
                      adv EAliGa +l++
      KHJ32711.1 1234 ADVCEALIGAALLSY 1248
                      ***********9986 PP

  == domain 2  score: 66.5 bits;  conditional E-value: 1e-21
                      HHHHHHHHHHHHHHHHHHHHHHCTTSSHHHHHHHHHHHTSHHHHHHHHHCTTCHCCHCHH............................HHCCS CS
  Ribonuclease_3    1 erLeflGDavlklaittylfetypdahegrlsklrsklvsnenlarlakklglpkflrasefdpprnwlppgy..............klsdde 79  
                      +rLeflGD+ l++a  +ylf+ +p ++++ l++ + ++vsn++l +l+ k+g++++l + + ++ +++ + +               ++++++
      KHJ32711.1 1338 QRLEFLGDSLLDMACINYLFHNFPGKDPQWLTEHKMAMVSNMFLGALCVKIGFNQHLLVFNHTFMKQIEEYVVeitdardqaekeaiEAGKSP 1430
                      7*********************************************************99999999888876667666666666666666666 PP

                      TTCHC........TSHHHHHHHHHHHHHHHHHC CS
  Ribonuclease_3   80 keddd........adkvladvvEAliGaiylds 104 
                      +e++          +k l d+vEA+++ai++ds
      KHJ32711.1 1431 DECSPdywmsvrqPPKCLPDIVEAYVAAIFVDS 1463
                      6644489999999******************97 PP

>> Ribonucleas_3_3  Ribonuclease-III-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1         3   7.7e+03      40      71 ..      92     123 ..      87     125 .. 0.74
   2 !   31.6   0.0     6e-11   1.5e-07      14     110 ..    1132    1247 ..    1131    1265 .. 0.80
   3 !   38.6   0.0     4e-13     1e-09       3      80 ..    1315    1396 ..    1313    1413 .. 0.87
   4 ?    2.4   0.0     0.062   1.6e+02      93     120 ..    1445    1474 ..    1439    1479 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3
  Ribonucleas_3_3  40 yllekaekdegeltklraslvseeslaeiAke 71 
                      ++++ +e +++++ k+r+++v  e +++i k+
       KHJ32711.1  92 EVIRITESQKVSQNKRRQDVVAAEYMKDINKK 123
                      45666777888888999999988888887765 PP

  == domain 2  score: 31.6 bits;  conditional E-value: 6e-11
  Ribonucleas_3_3   14 fangrkghNerLefLGdavLklsvseylle.kaekdegeltklraslvseeslaeiAkelgLgkvlrl..................rkgeee 86  
                       f++g+ +++erLefLGd  Lk+++s  l+  ++e +e ++  +r+ l s+++l + A++l+L +++r                   +  +++
       KHJ32711.1 1132 FQRGMGNNYERLEFLGDCFLKMATSISLYGlQPENNEFAYHVDRMLLTSNKNLRDNAIKLKLYEYIRSqsfnrrawypeglvllrgKAAKVK 1223
                       788999****************98877765156669999999**9**********************9999999999999999763333333 PP

  Ribonucleas_3_3   87 tegsgrekvladaleAliGAiyld 110 
                             +k +ad++eAliGA  l+
       KHJ32711.1 1224 DSHDLADKTIADVCEALIGAALLS 1247
                       34444567***********97664 PP

  == domain 3  score: 38.6 bits;  conditional E-value: 4e-13
  Ribonucleas_3_3    3 elleqaltHkSf...angrkghNerLefLGdavLklsvseyllekaek.degeltklraslvseeslaeiAkelgLgkvlrl 80  
                        ll  a+tH S+    n++ ++++rLefLGd++L+++ ++yl++++   d + lt+ ++++vs+  l  +  ++g++++l++
       KHJ32711.1 1315 RLLCSAFTHPSYprsYNENIPSYQRLEFLGDSLLDMACINYLFHNFPGkDPQWLTEHKMAMVSNMFLGALCVKIGFNQHLLV 1396
                       68999*******776667889***********************987736778999********************999987 PP

  == domain 4  score: 2.4 bits;  conditional E-value: 0.062
  Ribonucleas_3_3   93 ekvladaleAliGAiyldkgae..vaqefv 120 
                        k l d++eA ++Ai++d+ ++  ++++f+
       KHJ32711.1 1445 PKCLPDIVEAYVAAIFVDSEYDysEVEKFF 1474
                       567889***********9875411556666 PP

>> Dicer_dimer  Dicer dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.27     7e+02       4      17 ..     645     658 ..     644     684 .. 0.79
   2 !   66.2   0.0   8.7e-22   2.2e-18       1      91 [.     693     779 ..     693     780 .. 0.96
   3 ?   -3.1   0.2       3.5   8.9e+03      67      76 ..    1094    1103 ..    1092    1105 .. 0.88
   4 ?   -3.4   0.0       4.4   1.1e+04      36      84 ..    1201    1249 ..    1180    1249 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.27
  Dicer_dimer   4 lLnrycatlpsdey 17 
                  +L ++c+ lp+d+ 
   KHJ32711.1 645 ILRQFCDMLPEDRK 658
                  699********984 PP

  == domain 2  score: 66.2 bits;  conditional E-value: 8.7e-22
  Dicer_dimer   1 aislLnrycatlpsdeytdlrpeyevkevedkergkfqaevtLPsnsplrkiegepmstkklAkrsaAfeackeLhkaglLddhLlPlske 91 
                  ++ +L++++++lp++   + ++ey ++++    ++++q+e +LP++sp++  +g++ stk+ Ak+saA+e+c++L k ++Ld+ L P++++
   KHJ32711.1 693 SLVVLANFVDKLPNSGEGNYQVEYVITSQ----GTRYQCEAILPETSPIQGTVGHWASTKQIAKCSAAYETCIKLLKGKYLDNWLIPIYTR 779
                  6779**********998999******999....******************************************************9976 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 3.5
  Dicer_dimer   67 aAfeackeLh 76  
                   +A+eac+ Lh
   KHJ32711.1 1094 IALEACELLH 1103
                   69*******9 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 4.4
  Dicer_dimer   36 kfqaevtLPsnspl.rkiegepmstkklAkrsaAfeackeLhkaglLddh 84  
                   +f  + + P+ + l r  + ++  +  lA + +A ++c++L+ a lL  h
   KHJ32711.1 1201 SFNRRAWYPEGLVLlRGKAAKVKDSHDLADKTIA-DVCEALIGAALLSYH 1249
                   5555556677777557777788888899998888.899999999888765 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.2   5.6e-19   1.4e-15       8     107 ..     498     614 ..     491     617 .. 0.85

  Alignments for each domain:
  == domain 1  score: 57.6 bits;  conditional E-value: 5.6e-19
                 HHH...HHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTT..............STHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEE CS
  Helicase_C   8 ell...kleeeggkilifvntidrlek.vklllekkgikvavlhge..............lpqnereeileqfnkgesdvLiatdvaerGidipkvnlV 88 
                 ++l    ++e ++k+++fv+ + ++   ++l+ e+++i++ +lh                ++ +++  +l +f+kg  ++L at+vae+G+d+p++nlV
  KHJ32711.1 498 RYLrerYERETNDKCIVFVKERYTARLlARLF-EQNAIRTEYLHVGtligtrsddasnlnTTFRDQVVTLIKFRKGILNCLFATSVAEEGLDVPDCNLV 595
                 4444445899*************886645555.8889*******997888888888886666677778999999************************* PP

                 EESSSSSSHHHHHHHHTTS CS
  Helicase_C  89 infdlprnvtsyiqriGRt 107
                 i+fdl  ++ + iq++GR+
  KHJ32711.1 596 IRFDLYSTLIQHIQSRGRA 614
                 ******************8 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   2.7       2.2   5.7e+03      77     122 ..      61     123 ..      47     146 .. 0.63
   2 !   50.9   0.1   6.9e-17   1.8e-13      21     169 ..     162     328 ..     130     330 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.2
                 GTGG......GEEEESSS-B--.........-SEEEEEHHHHHHTH................. CS
      ResIII  77 flseayke..igkkvsgdkkka..kekdstnkkilvttiqsldadseee.............e 122
                  +++++++  + + ++ +++++     +s++  i +t+ q+++++++++             +
  KHJ32711.1  61 SIPTTNAKseNAQQIEAEENIIydPDDSSEDEVIRITESQKVSQNKRRQdvvaaeymkdinkK 123
                 444444434455556666666676666778888999999999999977766666665444330 PP

  == domain 2  score: 50.9 bits;  conditional E-value: 6.9e-17
                 .......TTSEEEEEESTTSTHHHHHHHHHHHH-S.............-EEEEESSHHHHHHHHHHGGGGTGG.........GEEEESSS-B--..... CS
      ResIII  21 s.....krdkrglikmaTGtGKTlvaaklierllkkgkee........kflflvprkslleqtleefkkflseayke.....igkkvsgdkkkakekds 101
                        + ++++ ++ TG+GKTl+a+ l +++l+++ e+          +flv++ +l+ q    +k  l+ + +       +  +++++ ++   + 
  KHJ32711.1 162 VelfdrAKARNIIAVLDTGSGKTLIAVLLLRHILSQELEDraigkkkrISFFLVDSVQLVFQQHAVLKANLNAPMEMfcgnmGCDLWNKEQWEK---HF 257
                 0333336678999**************999999998887799***998889*************999999998877745544444455555555...88 PP

                 ..-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.TTTHHHHHT---........SEEEEEESS- CS
      ResIII 102 tnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakkswreilekfke........avllglTATp 169
                  +++i+v t + l + +     ++   + + ++++i+DEaH++++++++ +i++ f +          ++g+TA p
  KHJ32711.1 258 VENDIIVCTAEVLRQCL-----HHSFIKIEDINLLIFDEAHHAKKDHAYARIIKDFYArepsdsrrPRIFGMTASP 328
                 999**************.....66777788888******************9888844456667779*******88 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1   0.0     7e-15   1.8e-11       4     168 ..     161     327 ..     158     334 .. 0.76

  Alignments for each domain:
  == domain 1  score: 44.1 bits;  conditional E-value: 7e-15
                 HHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS.....TTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.STSEEEEEET.TSSHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx.xxxxxxxxxxxx RF
        DEAD   4 QaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet.....kgktgpkalivePtreLaeqtlnnlkkfkky.idlrvlliig.gvaardqlskld 95 
                 Q e ++ +   +++++  +TGsGKTl++++ + +i++++      gk++   ++++ + +L+ q++  lk  ++  ++   +  +g +   ++q++k  
  KHJ32711.1 161 QVELFDRAK-ARNIIAVLDTGSGKTLIAVLLLRHILSQEledraIGKKKRISFFLVDSVQLVFQQHAVLKANLNApME-MFCGNMGcDLWNKEQWEKHF 257
                 555555554.78*********************9998889998768999999******************99996344.33333443344467777776 PP

                 TTCSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHT.TTHHHHHHHHHHSHHHCTTSTTTSEEEEEESS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  96 ngvdivvgtpgrlddllstgklnlsqvrflVlDEadrlldq.gfsdfinrilnqlpqitcdgklqrqvivlSAT 168
                  + di+v t + l + l+   ++++++++l++DEa+   ++  + + i+   ++ p    + +   ++  ++A 
  KHJ32711.1 258 VENDIIVCTAEVLRQCLHHSFIKIEDINLLIFDEAHHAKKDhAYARIIKDFYAREP----SDSRRPRIFGMTAS 327
                 78***************9999****************9998455555544444333....22222236666665 PP

>> dsrm  Double-stranded RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   0.00044       1.1      17      67 .]     711     763 ..     698     763 .. 0.83
   2 !   14.1   0.1   2.4e-05      0.06      31      67 .]    1528    1564 ..    1520    1564 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00044
                 EEEEEEEESSTSSSEEEEEEEEETTEEEEEEEE....SSHHHHHHHHHHHHHHHH CS
        dsrm  17 nyeyvseegpphslpkFvvtvkvngklygsGvg....snKKeAeqsAAedalekL 67 
                 ny++  + ++ ++  ++++++++ ++ +++G+     s+K+ A+ sAA + + kL
  KHJ32711.1 711 NYQVEYVITSQGT--RYQCEAILPETSPIQGTVghwaSTKQIAKCSAAYETCIKL 763
                 5555555666555..9*************999999989************99776 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 2.4e-05
                  EEEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHH CS
        dsrm   31 pkFvvtvkvngklygsGvgsnKKeAeqsAAedalekL 67  
                   + vv v++ g++++ + g + K A+++A+++ale L
  KHJ32711.1 1528 ATIVVMVIIHGTVVSHAAGESVKYAKINASKKALELL 1564
                  47899999**************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       926  (0.0516482); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.96u 0.27s 00:00:01.23 Elapsed: 00:00:00.45
# Mc/sec: 10686.47
//
Query:       KHJ32712.1  [L=697]
Description: putative transcription factor cys6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (697 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       527  (0.0293937); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 5008.20
//
Query:       KHJ32713.1  [L=286]
Description: putative rare lipoprotein a -like double-psi beta-barrel domain-containing [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0012   18.7   0.1     0.0021   17.9   0.1    1.4  1  Barwin    Barwin family
     0.0035   17.6   0.1       0.01   16.1   0.1    1.8  1  DPBB_1    Lytic transglycolase


Domain annotation for each model (and alignments):
>> Barwin  Barwin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   2.3e-07    0.0021      47     108 ..     219     280 ..     190     286 .] 0.77

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 2.3e-07
      Barwin  47 afcgpagargqascGkclrvtntatnaqvtvrivdqcsng...GldldvalfnkldtdGvGyqqG 108
                 af g+ ++ g+  cGk + +    ++++ t+r+vd+c       +dl +++f+++++  vG  + 
  KHJ32713.1 219 AFMGE-KSNGNPYCGKTITI--VHNGKTSTARVVDKCMGCtgfSIDLSDSVFSQFEALSVGRTSA 280
                 55555.4557889***8765..56788899******766554589999********999997665 PP

>> DPBB_1  Lytic transglycolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   1.1e-06      0.01      31      77 ..     214     276 ..     187     282 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.1e-06
                 S................-TT-EEEETT--EEEEEEEE----STTECEEE-HHHHHHHT-TTTS CS
      DPBB_1  31 l................plgtycrvlsgksvtVtitDrgpfppgrhiDLSkaAfeklakpraG 77 
                 +                + +t+  v +gk+ t +++D++  + g  iDLS   f+++   + G
  KHJ32713.1 214 ValphafmgeksngnpyCGKTITIVHNGKTSTARVVDKCMGCTGFSIDLSDSVFSQFEALSVG 276
                 3445555566665555466665555559***************************99877666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 2195.83
//
Query:       KHJ32714.1  [L=521]
Description: putative peroxisomal-coenzyme a synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.7e-87  292.3   0.0    6.2e-87  291.9   0.0    1.1  1  AMP-binding    AMP-binding enzyme
    1.3e-14   54.9   0.7    2.7e-14   53.9   0.7    1.6  1  AMP-binding_C  AMP-binding enzyme C-terminal domain
    0.00068   18.6   0.1     0.0046   15.9   0.0    2.2  3  GH3            GH3 auxin-responsive promoter
  ------ inclusion threshold ------
       0.22   11.6   1.7       0.57   10.2   0.2    2.5  2  RTX_C          RTX C-terminal domain


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  291.9   0.0   1.4e-90   6.2e-87      10     421 ..      21     416 ..      15     418 .. 0.88

  Alignments for each domain:
  == domain 1  score: 291.9 bits;  conditional E-value: 1.4e-90
                  TSEEEEE.CCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEEE..E.TCT CS
  AMP-binding  10 dkvalvd.sgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseakvli..a.tvd 103
                   ++a++  ++e +t++Y+++ +++ ++   L  lGv+ ++ V i+ pns+e+v+++la  +  a+++plnp++++ee ++ + d ++++l+  +   d
   KHJ32714.1  21 HATAIIVpGEEPTTISYKNMASEILSFQIKLALLGVTVESAVSIAFPNSYEFVISFLASTSQRAIAAPLNPQYKQEEFEFYIGDLNSTLLLvpKgSFD 118
                  46777777899********************************************************************************6623333 PP

                  CCCHHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHHHHHCSCCTT CS
  AMP-binding 104 selleklleaaakleavklvivldadellkeeelkeeeeseekaekpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslkletrfklke 201
                  ++  +++++a+    a ++++   ++ +l+    k+  + + k   +++ e+++p+d+a+i+ TSGTTG+PK+V l+hrnl+ +++++  +t+  l++
   KHJ32714.1 119 RNT-PAVRAARNFNTAIAECYWNGREMILDL---KDGGKLNGKG--NQKIERARPNDIALILHTSGTTGRPKAVPLTHRNLIKSMKNI--RTTYALTS 208
                  333.444444444444444444444444433...3333333333..447889*********************************997..56677899 PP

                  T-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHHHHCCCHHCHHHHCCGTT-SEEEEESS-EBHHH CS
  AMP-binding 202 ddvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvleallesgalkaakkakdlsslrlvllggeplspel 299
                  +d+ + ++pl+h+ gl ++ l++l++G++vv+++k++a  +k++ ++i+  k++  ++vP++ + ll+s++++        +s+r++ ++ +plsp++
   KHJ32714.1 209 HDRSFLVMPLFHVHGLLAGFLAPLFAGGSVVIPSKFSA--SKFWTDFIS-CKANWYTAVPTIHQILLNSSPPN------PKPSIRFIRSCSSPLSPTV 297
                  ************************************99..889*99999.******************77777......7899*************** PP

                  HHHHHHHHTCEEEEEEEEGGGSSECEECHCTTTCTSTTS-BEE-TTEEEEEE-TTTSCBEETTSEEEEEEEETTS-SEBTT-HHHHHHHEEETCCEEE CS
  AMP-binding 300 lrffralfgeevlegYGlTEttgvvtvlpleedkkklgsvGkplpgvevkivDeetgepvpdgeeGellvrgpgvmkgYlkkpeataeafdsegrwlr 397
                   +++++ fg +vle+Y +TE+++ +t +pl+ +k+ +gsvG +  gv++ki +e+ g  v  +eeGe++v+g++v+ gYl++p a+++af+ ++++++
   KHJ32714.1 298 FHKLEEAFGAPVLEAYAMTEAAHQMTSNPLPPEKRIPGSVGMA-QGVDIKIFNEN-GDKVSIDEEGEICVKGENVTAGYLNNPIANKSAFT-KDGFFK 392
                  *************************8878888889*******9.9*********9.999*******************************9.767*** PP

                  EEEEEEEETTSEEEEEEECCCEEE CS
  AMP-binding 398 TGDlgrldedGyleivgRkkdlik 421
                  TGD grlde+Gyl+i+gR+k+li+
   KHJ32714.1 393 TGDQGRLDENGYLYITGRIKELIN 416
                  **********************96 PP

>> AMP-binding_C  AMP-binding enzyme C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.7     6e-18   2.7e-14       1      76 []     426     501 ..     426     501 .. 0.95

  Alignments for each domain:
  == domain 1  score: 53.9 bits;  conditional E-value: 6e-18
                    HHHHHHHSSTTEEEEEEE-----TTS---EEEEEE------HHHHHHHHHHHHT-TTTS-SEEEE-S---B-TTS- CS
  AMP-binding_C   1 evEsalvshpaVaeaaVvGvpdevkGealvafVvlkdgsealeeeLkahvrkelgpyavpkkvvfvdelpktrsGK 76 
                    e+ ++l++h +++ea+ +++pd + Ge +++ Vv k++++ +ee++ka+++ +l++++vpk v+++d++ kt++GK
     KHJ32714.1 426 ELDNVLLQHSKIDEAVSFAIPDSIYGENIAVAVVAKKNEKVTEEDVKAWIKNRLADFKVPKIVHITDKIVKTATGK 501
                    789***********************99999999987765699********************************9 PP

>> GH3  GH3 auxin-responsive promoter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0     1e-06    0.0046      74     116 ..     168     208 ..     156     256 .. 0.85
   2 ?   -1.4   0.0      0.17   7.8e+02     392     421 ..     406     435 ..     404     450 .. 0.81
   3 ?   -1.8   0.0      0.24   1.1e+03     404     433 ..     462     491 ..     454     516 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1e-06
                 SS-SEEEEECCEETTEEEEEEESHHHHHHHHHH.HHHHHHHHH CS
         GH3  74 epiklfalsSGTtsgksKliPvteeslkelallvlallaalls 116
                 + i l++ +SGTt g++K +P t+++l + ++  +++ +al+s
  KHJ32714.1 168 NDIALILHTSGTT-GRPKAVPLTHRNLIKSMKN-IRTTYALTS 208
                 6788999******.***********99988876.777777774 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.17
                 EEEECCTEEE-SSSS-CCHHHHHHHHH.HH CS
         GH3 392 eFvgRknvvlsidgeklteeelqkaveeaa 421
                  ++gR +++++  gek++  el++++ + +
  KHJ32714.1 406 YITGRIKELINKGGEKISPIELDNVLLQHS 435
                 5789*******************9998544 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.24
                 SSS-CCHHHHHHHHH.HHHHHTT-EEEEEE CS
         GH3 404 dgeklteeelqkaveeaakeltglelvdft 433
                 + ek+tee++++ +++ ++ ++  ++v  t
  KHJ32714.1 462 KNEKVTEEDVKAWIKNRLADFKVPKIVHIT 491
                 689********9999999888333444433 PP

>> RTX_C  RTX C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       2.5   1.1e+04     133     158 ..     175     197 ..     167     212 .. 0.51
   2 ?   10.2   0.2   0.00013      0.57      67     111 ..     400     444 ..     342     457 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 2.5
       RTX_C 133 stsaftssskalsaspldirnnlssy 158
                  ts+ t+  ka    pl  rn ++s+
  KHJ32714.1 175 HTSGTTGRPKA---VPLTHRNLIKSM 197
                 55555555533...344444444333 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00013
       RTX_C  67 gkdGeritsqqvdeLiakgngkisaeelskvinnknkleeklsss 111
                 + +G   +   + eLi+kg++kis+ el +v+ +++k +e +s++
  KHJ32714.1 400 DENGYLYITGRIKELINKGGEKISPIELDNVLLQHSKIDEAVSFA 444
                 567766666789*******************99999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (521 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 3522.60
//
Query:       KHJ32715.1  [L=285]
Description: hypothetical protein EV44_g4506 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.072   13.0   0.1        9.3    6.2   0.0    2.8  2  DUF5380   Family of unknown function (DUF5380)
        0.2   12.0   1.8       0.26   11.6   0.1    1.9  2  DUF243    Domain of unknown function (DUF243)
       0.61   10.1   5.9       0.21   11.7   1.9    2.2  3  DUF87     Helicase HerA, central domain


Domain annotation for each model (and alignments):
>> DUF5380  Family of unknown function (DUF5380)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0015       9.3      46      71 ..       4      29 ..       2      43 .. 0.79
   2 ?    3.6   0.0      0.01        60      15      40 ..     120     145 ..     109     163 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0015
     DUF5380 46 ksdksanflsdGaGhvvfrqfrrlrl 71
                 sdks n ls+G+ +v +  + r  l
  KHJ32715.1  4 SSDKSHNILSEGQPDVRLFDYLRKNL 29
                699********999998877777655 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.01
     DUF5380  15 vknsrlidfiskavpsGvdapvpkia 40 
                  k++r+ dfis a+ + v + +++  
  KHJ32715.1 120 EKDQRFKDFISEAISKLVAPLISRQG 145
                 5899*********9988877666655 PP

>> DUF243  Domain of unknown function (DUF243)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   4.4e-05      0.26      17      76 ..      35      94 ..      24     104 .. 0.80
   2 ?   -1.8   0.1      0.65   3.9e+03      57      68 ..     246     257 ..     221     275 .. 0.55

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4.4e-05
      DUF243 17 eeekeleqlakalkknykvvFikaPenkaleaaalalakqqaeekTviYVLskkadeael 76
                ++++++ ++++++kk+y v  i a ++k+++++ +  +++++ + T+i  L+ ++ e  +
  KHJ32715.1 35 APKNNQLKARSKPKKHYSVAGIFATSTKSTNRSRKRGKEKNECNTTIINLLNDQMSEVGC 94
                444555567779*************999999999999989999999******99987665 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.65
      DUF243  57 qaeekTviYVLs 68 
                 ++ ek   +VL+
  KHJ32715.1 246 NEIEKLGTHVLQ 257
                 222223333333 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.31   1.9e+03     147     180 ..      61      89 ..      20     118 .. 0.59
   2 ?   11.7   1.9   3.5e-05      0.21     103     195 ..     113     208 ..     103     244 .. 0.87
   3 ?   -1.0   0.1      0.27   1.6e+03     164     213 ..     222     271 ..     209     284 .. 0.49

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.31
       DUF87 147 leelkkekeelrklknqaiarlldkledllrkgg 180
                       +++++++++ + +++ + ++ +ll+++ 
  KHJ32715.1  61 T-----KSTNRSRKRGKEKNECNTTIINLLNDQM 89 
                 2.....2223555555555555555555555554 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 3.5e-05
       DUF87 103 ldlleeddkpaaavqrsvleealdqaka....keekeklssdepveklleelkkeke.elrklknqaiarlldkledllrkggsfsnsstdliallle 195
                  +l+ +  k++ ++ ++++ ea+++++a    ++ + k+s+++++ ++ ++++++++ ++ ++  ++++ + + l++l+++++++ + +++++al  e
  KHJ32715.1 113 KNLATI--KEKDQRFKDFISEAISKLVAplisRQGELKISTNHSDSRISSDINTSATtTATYNIANYKQVVDAELKNLKNYWKQWEDIHDEYLALGIE 208
                 445555..666788999999****9999***99999*****************888889**************************7777777766655 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.27
       DUF87 164 aiarlldkledllrkggsf.snsstdliallleklekegkitiidlsgvde 213
                 ++++ +d  e l+++++++ ++ ++++++l   +l+k +k    dl  v +
  KHJ32715.1 222 QQKGFKDEMELLQLHQKTKiIELENEIEKLGTHVLQKMRKSEK-DLDVVIK 271
                 4455555555555555555434444444444444444444433.4444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1306  (0.0728429); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2212.81
//
Query:       KHJ32716.1  [L=325]
Description: putative branched-chain-amino-acid aminotransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.9e-18   66.6   0.0      2e-17   63.8   0.0    1.9  1  Aminotran_4  Amino-transferase class IV


Domain annotation for each model (and alignments):
>> Aminotran_4  Amino-transferase class IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.8   0.0   1.1e-21     2e-17       1     188 [.      57     265 ..      57     322 .. 0.87

  Alignments for each domain:
  == domain 1  score: 63.8 bits;  conditional E-value: 1.1e-21
  Aminotran_4   1 glfEtmrvy...ngei..ffldeHleRLrksaellglelpfdeeelrkileelleannsen.........grlrllvsrgggglgaatsepsvavyvs 84 
                  ++fE+++ y   +g +  f+ d ++eRL  s++++   ++f+ +e+ k++  l++ ++ +          +++r+ + + ++glg a+++  ++ +++
   KHJ32716.1  57 QCFEGLKMYrgyDGALrlFRPDINCERLLISSRRI-SLPEFNPKEIVKLIIALAAFDGPKWlprsrpgscLYIRPCIMGSQAGLGVASPKEAILFIIA 153
                  68*****8877766556699************999.899***********999999988888*****99999*************7777666666666 PP

  Aminotran_4  85 alppgpesekelplvtssdvrrdapsplpgaKtln.yldnvlarreakergadevllvdedgnvtEgstsNv.fivk.....ggelitPplssg..iL 173
                  ++ p++     l+l  ++ v r  p  + +aK    y ++++a  eak++g+ +vl++ +d  vtE++ sN+ +i+k       +l+t+p+ +   iL
   KHJ32716.1 154 TFMPPAVFPHGLRLLADDTVVRAWPGGFGYAKVGAnYGPSLMATFEAKKKGFHQVLWLFDD-IVTEAGASNFfVIWKhpttsKLQLVTAPMNDQklIL 250
                  666666666668888777777777777778887655********************55554.5*********8888888888889******99999** PP

  Aminotran_4 174 pGitrrallelakal 188
                  +G+trr++l+l k++
   KHJ32716.1 251 DGVTRRSILQLTKER 265
                  ***********9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2585.08
//
Query:       KHJ32717.1  [L=159]
Description: putative thioredoxin-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.9e-16   58.7   0.0    1.1e-15   57.6   0.0    1.6  1  Glutaredoxin  Glutaredoxin


Domain annotation for each model (and alignments):
>> Glutaredoxin  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.0     6e-20   1.1e-15       1      60 []      54     121 ..      54     121 .. 0.98

  Alignments for each domain:
  == domain 1  score: 57.6 bits;  conditional E-value: 6e-20
                   EEEEES.....TSSHHHHHHHHHHHHTTGG...EEEEEGCCSHHHHHHHHHHHTSSSSSEEEETTEEE CS
  Glutaredoxin   1 vvlftk.....ptCpyCkkakrlLkelgvk...feeidvdkdeeireelkelsgvrtvPqvfidgkhv 60 
                   vvlf+k     p+C+++++++++L  +gv+   f+ ++v++de++r+ +ke+s+++t+Pq++id +++
    KHJ32717.1  54 VVLFMKgtpetPQCGFSRATIQILGLQGVDpgkFTAFNVLEDENLRAGIKEFSEWPTIPQLYIDKEFI 121
                   89***************************9999********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1293.13
//
Query:       KHJ32718.1  [L=373]
Description: putative chorismate synthase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2657.10
//
Query:       KHJ32719.1  [L=429]
Description: putative beta-ketoacyl synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.8e-60  203.3   0.1    1.3e-59  201.9   0.0    1.8  3  ketoacyl-synt    Beta-ketoacyl synthase, N-terminal domain
    4.2e-36  123.5   0.4    7.2e-36  122.8   0.4    1.4  1  Ketoacyl-synt_C  Beta-ketoacyl synthase, C-terminal domain
      1e-05   25.1   0.1      2e-05   24.1   0.1    1.4  1  Thiolase_N       Thiolase, N-terminal domain


Domain annotation for each model (and alignments):
>> ketoacyl-synt  Beta-ketoacyl synthase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  201.9   0.0   2.1e-63   1.3e-59       1     253 []       1     258 [.       1     258 [. 0.86
   2 ?   -2.3   0.0      0.46   2.7e+03      95     111 ..     294     313 ..     291     363 .. 0.63
   3 ?   -3.5   0.0         1   6.3e+03     154     170 ..     406     422 ..     398     424 .. 0.79

  Alignments for each domain:
  == domain 1  score: 201.9 bits;  conditional E-value: 2.1e-63
                    X--EEEEEEEEEBTTBSSHHHHHHHHHTT---EEES-TTSSCGTTSBTSSTTEEE-BSS.EEE..STTEGGTTSTHHHHHHHCTS-HHHHHHHHHH CS
  ketoacyl-synt   1 aepvaivGmgarfPggndveefwelLlegrdaiselpadrwdadklydpparaagkiktklggfldvddfdpeffgispreaeamdpqqrllleaa 96 
                    +++v+i+G+ga++P g + +++w+ L+eg+ +i ++  ++  ++k++++p+++ag +++   gf ++ +++ + +  s++e ++m +++++++ a+
     KHJ32719.1   1 MRRVVITGIGAVTPLGIGIRQVWSKLIEGKCGIVSIA-NLQPVYKWKELPSTIAGLVPE---GFQKDGKWNSSEWL-SKEEERRMARFTQYAIAAT 91 
                    689*******************************999.489999999***********9...88887777666655.555568************* PP

                    HHHHHHHTS-HHTC.TTGGEEEEEEESST....HHHHHHHHHHHTT..GGGSCTTHHHHHSTTHHHHHHHHHHT--SSEEEEESGGGHHHHHHHHH CS
  ketoacyl-synt  97 wealedagltpeel.dgsrvgvfiGvgag....dyaalaaldedgs..evkaspkavgavlanviagrisyalglrGpsvtvdtACsSslvavhaa 185
                    + al+d+g+ pe++ d++r+gv++G+g+g        ++++ ++++  ++k+sp +v+ +l n  ag+is+++g++Gp+++v+tAC++++ a+  a
     KHJ32719.1  92 QMALQDSGWWPEKQyDKERTGVCLGSGIGnlneI---YQTSIKYEQsgYKKVSPLFVPQLLINLGAGHISMKYGFEGPNHAVSTACTTGAHAIGDA 184
                    *********7777758888**********64433...333333333449****************************************6666666 PP

                    HHHHHTTS-SEEEEEEEE---SHHHHHHHHHTT.BB-TT..SG...GGTTBTTB-SB-BB-EEEEEEEEECHHH CS
  ketoacyl-synt 186 vqslrsgeadvalaGGvellltpeavagfsaag.llspd..gr...ckafdpkadGfvlGEGvGavvLkrleda 253
                     + +  g+adv++aGG+e +++p a+agf++ + l++++  ++   +++fd + +Gfv++EG+G+v+L++le+a
     KHJ32719.1 185 SRFIAFGDADVMVAGGSESCIHPLALAGFARSRsLTTEYndQPmisSRPFDRDRSGFVIAEGAGIVILEELEHA 258
                    6********************************666665754455567777777*****************987 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.46
                    HHHHHHHHHTS-HHTC...T CS
  ketoacyl-synt  95 aawealedagltpeel...d 111
                    a+++al++a l+p+e+   +
     KHJ32719.1 294 AMRRALKNASLSPKEIsyiN 313
                    56778888888887773332 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 1
                    HHHHHHHHHT--SSEEE CS
  ketoacyl-synt 154 iagrisyalglrGpsvt 170
                    + + is+++g+ G + +
     KHJ32719.1 406 VKNAISNSFGFGGTNAS 422
                    56889999**9998865 PP

>> Ketoacyl-synt_C  Beta-ketoacyl synthase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.8   0.4   1.2e-39   7.2e-36       1     117 [.     266     385 ..     266     386 .. 0.98

  Alignments for each domain:
  == domain 1  score: 122.8 bits;  conditional E-value: 1.2e-39
                      SEEEEEEEEEE--STSSSTSTTHHHHHHHHHHHHHHHT--GGGEEEEE-SS-SSHHHHHHHHHHHHHHHGGGGG...SCTSEEE-THHHH-B-G CS
  Ketoacyl-synt_C   1 yavikgsavnsdgahnsltapngeaqaraiekalaeagvdpedvdyveahgtgtplgDpiElealkkvfgekar...kqplavgSvKsniGHle 91 
                      ya+ikg+++++d+ h++++++ng+++  a+++al++a ++p++++y++ah+t+tplgD +E +a+k+++  +     ++ +av+S+K  +GHl+
       KHJ32719.1 266 YAEIKGYGCSGDAFHITAPRENGAGAFLAMRRALKNASLSPKEISYINAHATSTPLGDDAENSAIKQLMLGHDGvgkESDIAVSSTKGATGHLL 359
                      8********************************************************************99988999899************** PP

                      GGHHHHHHHHHHHHHHHTEE--BTT- CS
  Ketoacyl-synt_C  92 aAaGvaelikvvlalkhgvipptlnl 117
                      +AaG++e+i ++la+k++v+pptlnl
       KHJ32719.1 360 GAAGAIEAIFSILAVKENVMPPTLNL 385
                      *************************8 PP

>> Thiolase_N  Thiolase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.1   3.4e-09     2e-05      72     115 ..     163     204 ..     152     231 .. 0.85

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 3.4e-09
                 S-TTSEEEEEEHGGGHHHHHHHHHHHHHHTTSHSEEEEEEEEES CS
  Thiolase_N  72 ipeevpavtvnkvcsSglkavalaaqsiaageadvvvagGvEsm 115
                 +  e p ++v  +c  g++a+ +a + ia g+adv+vagG Es 
  KHJ32719.1 163 F--EGPNHAVSTACTTGAHAIGDASRFIAFGDADVMVAGGSESC 204
                 4..66899**********************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       311  (0.0173462); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 3310.89
//
Query:       KHJ32720.1  [L=1507]
Description: putative ubiquitin carboxyl-terminal hydrolase usp19 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.5e-71  239.1   0.2    8.5e-71  238.5   0.2    1.3  1  UCH         Ubiquitin carboxyl-terminal hydrolase
    4.2e-15   56.1   0.6    1.9e-14   54.0   0.1    2.6  2  DUSP        DUSP domain
      3e-12   46.8   0.1    0.00018   21.3   0.0    3.4  2  UCH_1       Ubiquitin carboxyl-terminal hydrolase
  ------ inclusion threshold ------
        2.3    8.2   4.9       0.66    9.9   0.7    2.2  2  RNA_capsid  Calicivirus putative RNA polymerase/capsid protei


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  238.5   0.2   1.9e-74   8.5e-71       1     257 []     418    1241 ..     418    1241 .. 0.98

  Alignments for each domain:
  == domain 1  score: 238.5 bits;  conditional E-value: 1.9e-74
                  -EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHH..SH-CCEE--HHHHHHHHHHSGGGTSS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH    1 tGlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkell..kskskavsPkklkktlsklaksfsgy 95  
                  +GlsNlGntCymns+lQc+ +++el++y+l            +eln++nplg++g +a a+++l++e++  ++  ++++P+++++t++++a+sfsgy
  KHJ32720.1  418 VGLSNLGNTCYMNSALQCIRAVEELTKYFLA-------GAAMEELNNANPLGNNGDVAIAYQKLLEEIYhkENAPCSITPRHFRNTIGRYAPSFSGY 507 
                  6******************************.......6777788999*********************7755678********************* PP

                  STCEHHHHHHHHHHHHHHHHCC........................HCCCHHHHHHCCCTTSHHHHHH-EEEEE....................... CS
                  xxxxxxxxxxxxxxxxxxxxxx........................xxxxxxxxxxxxxxxxxxxxxxxxxxxx....................... RF
         UCH   96 kqqDaqEflaflLdqlhedlnr........................evaeekwkkhlkrndslitdlfegqlks....................... 145 
                   qqD+qEfl flLd+l+edl+r                        ++a++ w+ ++kr ds+i dlf g++ks                       
  KHJ32720.1  508 GQQDSQEFLGFLLDGLQEDLSRvkkkpyiekpdstddminnpdairQMADKVWDITKKRDDSIIADLFTGMYKStlvcpecekvsitfdpfnnltlq 604 
                  *********************************************99999999******************************************** PP

                  ................................................................................................. CS
                  ................................................................................................. RF
         UCH  146 ................................................................................................. 145 
                                                                                                                   
  KHJ32720.1  605 lpiesiwahniyyfplnerpfimtieidkqasiyvlkqyvsvrvgvpveklfiaeefkcrfyklyrdfetaseiiqntdhvavyeldnsptnwpppn 701 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
         UCH  146 ................................................................................................. 145 
                                                                                                                   
  KHJ32720.1  702 rlkkkstsmhdnnelyevpnwddpiascmlvpvihrrpntgsslrtprrenkkawvvdcaphtitltpaearsedvirrkilekvatfttstafaen 798 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
         UCH  146 ................................................................................................. 145 
                                                                                                                   
  KHJ32720.1  799 evdvanntdtpdlnlsitsesddrfsnegkittliqektditmgnnssnvdlpkfqdstqiqpktssdkresdapfksktarpkwinssshlkpefq 895 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
         UCH  146 ................................................................................................. 145 
                                                                                                                   
  KHJ32720.1  896 nmfeigyckgtkeiipsgwniidedkiypsissrlcqpsqtidgevienedsdsritssetsdedsanfsgasnlnedsesdddpifnnalpvrsag 992 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
         UCH  146 ................................................................................................. 145 
                                                                                                                   
  KHJ32720.1  993 skstvgkvltkasknrhgilprkiksnnsdviksietdqdegplvrlgemiivdwnphsfdayfsgdgfdnrsqatwdkmptrkddvleekrksrlq 1089
                  ************************************************************************************************* PP

                  ........................................EEEEEEB-SEEEEEEESEEETEE.EEE--SEEB--S.EEE-GGGBSS-BTTS-TCS- CS
                  ........................................xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxx RF
         UCH  146 ........................................klklkrlPeiLiihlkRfsynss.ksKlntkvefpe.eldlssylaeekkkkteekk 200 
                                                          k +l+++P+iLiihlkRfs   + ++Kl+ +v+fp+  ldl+s + ++++   e+k+
  KHJ32720.1 1090 rkkngitlddcldefgkeetlsemdtwycprckehrraskKFELWKTPDILIIHLKRFSSCARrRDKLDIRVDFPIeGLDLTSRVISKNE---EKKE 1183
                  ***********************************************************966669**********758***998884444...4578 PP

                  BEEEEEEEEEESCTTSEEEEEEEECTTTTEEEEEETTEEEEE-HHCCCTT.CEEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx RF
         UCH  201 kYeLiavvvHsGslssGHYvayiknekngkWykydDetvkevkeeeevls.sayiLfY 257 
                  +Y+Liav +H G+l++GHY+a+++n +ng+Wy y+D++v++ k+ +e+ s say+LfY
  KHJ32720.1 1184 IYDLIAVDNHWGGLGGGHYTAHARNFHNGEWYEYNDSSVSKQKSLSEMISsSAYLLFY 1241
                  9*****************************************976555556******* PP

>> DUSP  DUSP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.0   0.1   4.3e-18   1.9e-14       1      89 [.      84     177 ..      84     180 .. 0.82
   2 ?   -3.6   0.1         4   1.8e+04      28      46 ..    1007    1027 ..     968    1036 .. 0.63

  Alignments for each domain:
  == domain 1  score: 54.0 bits;  conditional E-value: 4.3e-18
                 T-EEEEEEHHHHHHHHHHHTTSTTSTT.TTCGCS--SB-CGGGB..........TTTEB-SS--BTTTEEEEEHHHHHHHHHHC-...T----EEE CS
        DUSP   1 gqkyyliskkWleqwksyvsydavtee.kesgskpgpIdnsdllkappltk...engrlkpnlqegrdyeivpeevwkfLvqwYg...ggpeikrk 89 
                 g+k+yl+s+kWl ++k++ s  ++ ++ + ++ ++gpI+nsd++k+++++    +  +lk  l    d+++vpe++w++Lv+wYg   g  +i+r 
  KHJ32720.1  84 GDKAYLLSNKWLSRFKDQDSGLQKFKQpNLED-NVGPINNSDIIKQIIKDVngnDFVQLKAGLGS-PDFTLVPESAWRLLVEWYGivpGTIPIIRV 177
                 79**************9997777777734444.5**********655555577788888888885.9******************88877777775 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 4
                  TTCGCS--SB..-CGGGB... CS
        DUSP   28 kesgskpgpI..dnsdllkap 46  
                  +  g+ p +I  +nsd +k++
  KHJ32720.1 1007 NRHGILPRKIksNNSDVIKSI 1027
                  333345777777888888433 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   7.1e-08   0.00032       1     166 [.     418     606 ..     418     644 .. 0.87
   2 !   21.3   0.0   3.9e-08   0.00018     172     320 .]    1090    1222 ..    1056    1222 .. 0.76

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 7.1e-08
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   1 sGLEnhivnsYlNslLQvlyfipplrnlalshlakeckkehcLlcElgflfdmldkakglncqasnFlralssipeasalglileeeeetekssaisls 99 
                 +GL n  +++Y+Ns LQ+ + +++l++  l+ +a e  ++   l   g +    +k   +  +++n   +++  +  +++g +  +        +   +
  KHJ32720.1 418 VGLSNLGNTCYMNSALQCIRAVEELTKYFLAGAAMEELNNANPLGNNGDVAIAYQKLLEEIYHKENAPCSITPRHFRNTIGRYAPS-------FSGYGQ 509
                 7********************************99999999999999999999999999999999999999988888999997332.......233455 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxx..............................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 100 sliqsfnrflldqlekelketkkns..............................seeesaieqllgtkaettirclkCgseksrksstlvldlkyP 166
                 +  q+f  flld l+++l++ kk++                              ++++s+i++l++  +++t+ c +C++ +   + +  l l+ P
  KHJ32720.1 510 QDSQEFLGFLLDGLQEDLSRVKKKPyiekpdstddminnpdairqmadkvwditkKRDDSIIADLFTGMYKSTLVCPECEKVSITFDPFNNLTLQLP 606
                 66789***************99988*****************************999***********************99877777666666555 PP

  == domain 2  score: 21.3 bits;  conditional E-value: 3.9e-08
                  xxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  172 kkeakvtfasilksslerektt...rawCekCkryqpteqrktvknlPpvLalnakleeeeelelwktknwlpleiklsldedknleeklkeereka 265 
                  +k++  t++++l ++ ++e+ +   +  C++Ck+    +++  + + P++L++++k++++      ++++ l+ +++  ++  +       ++r  +
  KHJ32720.1 1090 RKKNGITLDDCLDEFGKEETLSemdTWYCPRCKEHRRASKKFELWKTPDILIIHLKRFSSC----ARRRDKLDIRVDFPIEGLD------LTSRVIS 1176
                  5555677777777777775433121567****************************98663....3445777777777666543......3455556 PP

                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  266 kaekeikvYeLqsvvvhigdskesghLvslvkvaekelerdppesqWylFNDflV 320 
                  k+e++  +Y+L++v  h g +   gh+ ++++  ++        ++Wy  ND +V
  KHJ32720.1 1177 KNEEKKEIYDLIAVDNHWG-GLGGGHYTAHARNFHN--------GEWYEYNDSSV 1222
                  7788999************.777*********5444........8*******998 PP

>> RNA_capsid  Calicivirus putative RNA polymerase/capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.7   0.00015      0.66     186     214 ..     275     304 ..     199     310 .. 0.73
   2 ?   -2.1   0.2      0.73   3.3e+03     139     182 ..     855     899 ..     812     906 .. 0.50

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00015
  RNA_capsid 186 vtpPssr.asssgtvstvpkevldswtpaF 214
                  tpPssr  s +g +  vp+e  dswt +F
  KHJ32720.1 275 STPPSSRpGSPNGNIDKVPHEPQDSWTKMF 304
                 59*****9999*****************99 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.73
  RNA_capsid 139 ssqstsstslsssssss..ssassrtssWvesqnsklePfmegalq 182
                  s++ ++ + s++ +s    ++ +   +W++s   +l+P  ++ ++
  KHJ32720.1 855 DSTQIQPKTSSDKRESDapFKSKTARPKWINSSS-HLKPEFQNMFE 899
                 2222222222222222233333333347998855.58886666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.88u 0.28s 00:00:01.16 Elapsed: 00:00:00.46
# Mc/sec: 9791.67
//
Query:       KHJ32721.1  [L=386]
Description: putative s-adenosylmethionine synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-66  223.0   0.8    1.8e-66  222.4   0.0    1.7  2  S-AdoMet_synt_C  S-adenosylmethionine synthetase, C-terminal 
    2.6e-45  153.6   0.0      5e-45  152.6   0.0    1.5  1  S-AdoMet_synt_M  S-adenosylmethionine synthetase, central dom
    1.6e-43  147.4   1.2    2.5e-43  146.8   0.2    1.8  2  S-AdoMet_synt_N  S-adenosylmethionine synthetase, N-terminal 
  ------ inclusion threshold ------
      0.075   11.8   0.5       0.64    8.7   0.1    2.2  2  AdoMet_Synthase  S-adenosylmethionine synthetase (AdoMet synt


Domain annotation for each model (and alignments):
>> S-AdoMet_synt_C  S-adenosylmethionine synthetase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       0.8   3.6e+03      79     101 ..     194     216 ..     171     233 .. 0.59
   2 !  222.4   0.0   3.9e-70   1.8e-66       1     138 []     243     380 ..     243     380 .. 1.00

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.8
                      EEEEE-S-BSS-HHHHHHHHHHH CS
  S-AdoMet_synt_C  79 isvetfgtekvseeeiaeivkev 101
                      + v+ +++e +++e++ e +ke+
       KHJ32721.1 194 VVVSAQHSEAITTENLREEIKEK 216
                      44444455555555555555543 PP

  == domain 2  score: 222.4 bits;  conditional E-value: 3.9e-70
                      S-TTTTS-EETTS-TTTTTTTTSS---S---TTB-TTSHHHHHHHHHHHHHHHHHHTTSBSEEEEEEEE-TT-SS-SEEEEEE-S-BSS-HHHH CS
  S-AdoMet_synt_C   1 iGgpkgdaGltgrkiivdtYgglaahgggafsgKdptkvDrsaayaaryvaknlvaaglakkvevqlsYaigvaepvsisvetfgtekvseeei 94 
                      iGgp+gdaGltgrkiivdtYgg++ahgggafsgKd +kvDrsaay+ar++ak+lv+a+la++ +vqlsYaigvaep+si+v+t+gt++ +++e+
       KHJ32721.1 243 IGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDFSKVDRSAAYVARWIAKSLVNAKLARRALVQLSYAIGVAEPLSIYVDTYGTSEKNSDEL 336
                      8********************************************************************************************* PP

                      HHHHHHH----HHHHHHHHTTTSS--TGGGSS-SSS--T-TTS. CS
  S-AdoMet_synt_C  95 aeivkevfdlrpaaiieeldLkkpiykktaayghfgreelpwek 138
                      +ei++++fdlrp+ i++eldL kpiy +ta++ghf++++++wek
       KHJ32721.1 337 VEIIRKNFDLRPGVIVKELDLAKPIYFQTAKNGHFTNQNFSWEK 380
                      *******************************************7 PP

>> S-AdoMet_synt_M  S-adenosylmethionine synthetase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.6   0.0   1.1e-48     5e-45       2     120 .]     121     241 ..     120     241 .. 0.96

  Alignments for each domain:
  == domain 1  score: 152.6 bits;  conditional E-value: 1.1e-48
  S-AdoMet_synt_M   2 igAgDqGimfGYAtdeteelmPlpillahklaerlaelrkegeleylrpDaKsqvtveYee...elkpvrvdtvvistqhdeevsqeklredlk 92 
                      +gAgDqGimfGYAtdet+el Pl+i+lahkl   ++++r++g+l++lrpD+K+qvt+eY++   +  p+rv+tvv+s+qh+e +++e+lre++k
       KHJ32721.1 121 LGAGDQGIMFGYATDETPELFPLTIQLAHKLNAAMSAARRNGSLPWLRPDTKTQVTIEYKHdngAVIPLRVHTVVVSAQHSEAITTENLREEIK 214
                      7**********************************************************65567889*************************** PP

  S-AdoMet_synt_M  93 ekvikkvlkeelldekktkllinptGkF 120
                      ek+ik+v+++++ldek t ++i+p+G F
       KHJ32721.1 215 EKIIKAVIPAKYLDEK-TIYHIQPSGLF 241
                      *********9999885.*********88 PP

>> S-AdoMet_synt_N  S-adenosylmethionine synthetase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.8   0.2   5.6e-47   2.5e-43       2      99 .]       9     106 ..       8     106 .. 0.99
   2 ?   -1.9   0.0       1.2   5.5e+03      54      54 ..     199     199 ..     166     236 .. 0.49

  Alignments for each domain:
  == domain 1  score: 146.8 bits;  conditional E-value: 5.6e-47
  S-AdoMet_synt_N   2 ylftsesVseGHPDkvadqisdaildailkedpkarvacetlvttglvvvageittkakvdiekivrevikeigYekeelgfdaktcevlvale 95 
                      +lftsesV eGHPDk+adq+sda+lda+l+ dp ++vacet+++tg+v+v+geittka+vd+++++r++ik+igY+++++gfd+ktc++lva+e
       KHJ32721.1   9 FLFTSESVGEGHPDKIADQVSDAVLDACLAVDPLSKVACETATKTGMVMVFGEITTKANVDYQSVIRNAIKDIGYDDSAKGFDYKTCNILVAIE 102
                      89******************************************************************************************** PP

  S-AdoMet_synt_N  96 eqsp 99 
                      +qsp
       KHJ32721.1 103 QQSP 106
                      ***7 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.2
  S-AdoMet_synt_N  54 e 54 
                      +
       KHJ32721.1 199 Q 199
                      1 PP

>> AdoMet_Synthase  S-adenosylmethionine synthetase (AdoMet synthetase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.1   0.00014      0.64      22      41 ..      14      33 ..      11      44 .. 0.88
   2 ?    0.9   0.0     0.035   1.6e+02      90     171 ..      61     140 ..      39     233 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00014
                     EEE-TTSHHHHHHHHHHHHH CS
  AdoMet_Synthase 22 ErKGiGHPDsiaDgiaeavs 41
                     E  G GHPD+iaD++++av 
       KHJ32721.1 14 ESVGEGHPDKIADQVSDAVL 33
                     66799************985 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.035
                      EEEEEE.EEE--HHHHHHHHHHHH.HHHH-SS--TTTSEEEEEEEEEEEEHHHHHHCH-SS...-BESSSEEEEEEES--HHHH CS
  AdoMet_Synthase  90 ratkevegekipveeialeaakey.lkenlraldlekdvivdvklgkgsadLkdvferkkk.evplaNDtSfgvgyaplselek 171
                        t+   + ++++++++ +a+k+   +++ + +d +    + v +++ s d+ +  + +++ e   a D  +  gya   + e 
       KHJ32721.1  61 EITT---KANVDYQSVIRNAIKDIgYDDSAKGFDYK-TCNILVAIEQQSPDIAQGLHYEEAlEKLGAGDQGIMFGYATDETPEL 140
                      4444...56799999999999997346667778876.67788899999999988777766667788999999999987655443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       563  (0.0314016); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2702.28
//
Query:       KHJ32722.1  [L=450]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0011   19.0   1.4      0.003   17.6   1.4    1.8  1  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   1.4   1.7e-07     0.003       2      16 ..     274     288 ..     274     290 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 1.7e-07
                 CTSSSSSSSSTTTTS CS
     zf-CCHC   2 kCynCGepGHiardC 16 
                 +C+nC++ GH+a+ C
  KHJ32722.1 274 QCFNCQKYGHVAKVC 288
                 6***********988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       979  (0.0546043); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3183.99
//
Query:       KHJ32723.1  [L=239]
Description: hypothetical protein EV44_g1309 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       762  (0.042501); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1799.95
//
Query:       KHJ32724.1  [L=161]
Description: hypothetical protein EV44_g0946 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-10   39.0  15.6    8.3e-10   38.5  15.6    1.3  1  Apq12     Nuclear pore assembly and biogenesis


Domain annotation for each model (and alignments):
>> Apq12  Nuclear pore assembly and biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5  15.6   4.6e-14   8.3e-10       2      54 .]      55     107 ..      54     107 .. 0.99

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 4.6e-14
       Apq12   2 PdlvsilllllilyvslkildrarRvvlfwvrllvrlvfwlavvlvgayvynR 54 
                 P+++++ l++l l++ l+i + +rR+++fw+rl++++ +w+++   ++ v++R
  KHJ32724.1  55 PSIMTVCLFVLSLFIILQIFNFIRRIIAFWLRLAMKISVWALIMIIVSLVWQR 107
                 99**************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1150  (0.0641419); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1182.69
//
Query:       KHJ32725.1  [L=293]
Description: putative gpn-loop gtpase 3 like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      5e-74  249.1   0.0    5.8e-74  248.9   0.0    1.0  1  ATP_bind_1       Conserved hypothetical ATP binding protein
      2e-05   24.5   0.0    7.6e-05   22.6   0.0    1.8  2  CLP1_P           mRNA cleavage and polyadenylation factor CLP
    0.00018   21.5   0.0    0.00057   19.9   0.0    1.8  1  CbiA             CobQ/CobB/MinD/ParA nucleotide binding domai
    0.00026   21.0   0.0     0.0009   19.3   0.0    2.0  2  AAA_14           AAA domain
    0.00044   20.8   0.0    0.00082   19.9   0.0    1.5  1  AAA_18           AAA domain
    0.00059   20.3   0.0     0.0011   19.4   0.0    1.5  1  AAA_16           AAA ATPase domain
     0.0028   16.8   0.0     0.0065   15.6   0.0    1.7  2  T2SSE            Type II/IV secretion system protein
     0.0028   17.4   0.0     0.0044   16.8   0.0    1.4  1  AAA_24           AAA domain
     0.0032   17.7   0.0     0.0054   17.0   0.0    1.4  1  AAA_22           AAA domain
     0.0053   17.2   0.0      0.011   16.2   0.0    1.5  1  AAA              ATPase family associated with various cellul
     0.0068   16.8   0.0      0.033   14.6   0.0    2.0  2  RNA_helicase     RNA helicase
     0.0069   16.1   0.0      0.012   15.3   0.0    1.4  1  AAA_29           P-loop containing region of AAA domain
     0.0093   15.9   0.0      0.015   15.2   0.0    1.3  1  NACHT            NACHT domain
  ------ inclusion threshold ------
      0.013   15.1   0.0      0.025   14.1   0.0    1.5  1  AAA_7            P-loop containing dynein motor region
      0.015   14.9   0.0      0.025   14.2   0.0    1.3  1  SRP54            SRP54-type protein, GTPase domain
      0.019   15.1   0.0      0.032   14.4   0.0    1.3  1  AAA_33           AAA domain
      0.031   13.9   0.0        1.1    8.8   0.0    2.2  2  cobW             CobW/HypB/UreG, nucleotide-binding domain
      0.035   14.5   0.0       0.11   12.9   0.0    1.8  2  AAA_19           AAA domain
      0.044   13.5   0.0       0.13   11.9   0.0    1.8  2  Thymidylate_kin  Thymidylate kinase
      0.049   12.8   0.0        0.1   11.8   0.0    1.5  1  ArsA_ATPase      Anion-transporting ATPase
      0.069   13.0   0.0       0.25   11.2   0.0    1.8  2  ATPase_2         ATPase domain predominantly from Archaea
      0.088   12.5   0.0       0.14   11.9   0.0    1.2  1  AAA_30           AAA domain
        0.1   12.3   0.0       0.19   11.5   0.0    1.5  1  IstB_IS21        IstB-like ATP binding protein
        0.1   12.5   0.0        3.3    7.6   0.0    2.3  1  AAA_31           AAA domain
        0.1   11.9   0.0       0.19   11.1   0.0    1.4  1  ATPase           KaiC
       0.16   11.4   0.0         10    5.6   0.0    2.4  2  GTP_EFTU         Elongation factor Tu GTP binding domain
       0.19   11.1   0.9        1.1    8.6   0.1    2.3  3  FtsK_SpoIIIE     FtsK/SpoIIIE family
       0.19   11.3   0.0       0.36   10.4   0.0    1.4  1  AAA_25           AAA domain


Domain annotation for each model (and alignments):
>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.9   0.0     9e-77   5.8e-74       1     241 []       8     273 ..       8     273 .. 0.96

  Alignments for each domain:
  == domain 1  score: 248.9 bits;  conditional E-value: 9e-77
  ATP_bind_1   1 vvGpaGsGKttfvgalseilelrgrsvavvNLDPAaeelpYeaavdirelitledvmedlglgpngalvvaleflresldwldeeleke.eddyllfDt 98 
                 v+GpaGsGKttf++al+ +l+++ rs+ +vNLDPAae+++ e+++di++litledvme+l lgpng+l++++efl e+ld + e+l+   e+ +++fD+
  KHJ32725.1   8 VMGPAGSGKTTFCSALMTHLRNNRRSCFYVNLDPAAENFAHEPDLDIKDLITLEDVMEELSLGPNGGLIYCFEFLLENLDFITEALDPLtEEYLIIFDM 106
                 89************************************************************************************8886668899*** PP

  ATP_bind_1  99 PGQielfthseslakiveeLes....efalvvvyLvDsqrltdptkfisgllsalsamlrlelPhvvvlnkfDllkek.lekeleffedvealslllek 192
                 PGQiel+th + l  +v++L++    +++l++ yL++++++ d +kf+ g+lsa+sam++le+Ph+++++k+Dl+k + +++el++f d++      + 
  KHJ32725.1 107 PGQIELYTHIPILPTLVKHLTRtgalDINLCAAYLLEATFVVDRAKFFAGTLSAMSAMIMLEVPHLNIMSKMDLVKGQiEKRELKRFLDPDVALFDDDY 205
                 ********************99888999************************************************99************987666555 PP

  ATP_bind_1 193 ee....................ekykklaeaiaelleefalvlrflplssekeesiedllslidealqe 241
                 +e                    + +k l++++a+l++ f++v + l l+ e+ees+  +ls id+a+q+
  KHJ32725.1 206 QEteeevddsrppkdvdmvmggQSFKMLNKSVARLIDSFGIV-SYLKLNIEDEESVGSILSFIDDAIQF 273
                 55667899**************99******************.***********************985 PP

>> CLP1_P  mRNA cleavage and polyadenylation factor CLP1 P-loop
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   1.2e-07   7.6e-05       1      38 [.      10      47 ..      10      49 .. 0.91
   2 ?   -1.2   0.0       2.3   1.5e+03     123     166 ..     188     232 ..     181     251 .. 0.66

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 1.2e-07
      CLP1_P  1 GpkdsGKSTlarlLlNyalrkgrkpvyvDlDvGqseis 38
                Gp  sGK+T++  L+  + ++ r++ yv+lD+   +++
  KHJ32725.1 10 GPAGSGKTTFCSALMTHLRNNRRSCFYVNLDPAAENFA 47
                899**************999999999******988876 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 2.3
      CLP1_P 123 leliealepdvvvvldq.eellnelkrdlplskvkvvklpkspgv 166
                  el ++l pdv ++ d+ +e ++e+ ++ p ++v++v   +s ++
  KHJ32725.1 188 RELKRFLDPDVALFDDDyQETEEEVDDSRPPKDVDMVMGGQSFKM 232
                 567788899999999997666777776666777777665555554 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   8.9e-07   0.00057       8      77 ..      12     244 ..       6     263 .. 0.73

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 8.9e-07
                 TTSSHHHHHHHHHHHHHHTT--EEEEEEEESSCCCCHHTTEB-HHHH.................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................................................... RF
        CbiA   8 GGvGKTtlaanLaralarrglrVllvDaDpqannlaileglendiep.................................................... 54 
                  G+GKTt++ +L++ l ++++  + v +Dp a+n a+    e+d++                                                     
  KHJ32725.1  12 AGSGKTTFCSALMTHLRNNRRSCFYVNLDPAAENFAH----EPDLDIkdlitledvmeelslgpnggliycfefllenldfitealdplteeyliifdm 106
                 59********************************995....4444444334456667777888888888888888888888888888888888888888 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
        CbiA  55 ................................................................................................... 54 
                                                                                                                    
  KHJ32725.1 107 pgqielythipilptlvkhltrtgaldinlcaaylleatfvvdrakffagtlsamsamimlevphlnimskmdlvkgqiekrelkrfldpdvalfdddy 205
                 888888888888888888777777777777777777777777777777777777777777777777777777777777777777777777777777777 PP

                 ................CCHCCCHHHHHHCHCHHHH..EE CS
                 ................xxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA  55 ................dlkrllellealgkkkalllkia 77 
                                 d+  +++++++l k++a l++  
  KHJ32725.1 206 qeteeevddsrppkdvDMVMGGQSFKMLNKSVARLIDSF 244
                 777777777777776666666666666666655555555 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   1.4e-06    0.0009       6      53 ..       7      55 ..       3     105 .. 0.80
   2 ?   -2.4   0.0       7.1   4.6e+03      91     110 ..     219     238 ..     186     258 .. 0.68

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 1.4e-06
      AAA_14  6 vitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpe.kll 53
                +++G+  +GKTt++  l+ +l  +++s++y+nld   +  + +p+ ++ 
  KHJ32725.1  7 LVMGPAGSGKTTFCSALMTHLRNNRRSCFYVNLDPAAENFAHEPDlDIK 55
                799***************9988************977754444444233 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 7.1
      AAA_14  91 knldvivtGSnskllskeia 110
                 k++d+++ G + k+l k +a
  KHJ32725.1 219 KDVDMVMGGQSFKMLNKSVA 238
                 45666666666666655443 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   1.3e-06   0.00082       2      25 ..       7      36 ..       6      94 .. 0.75

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 1.3e-06
      AAA_18  2 lltGtpGvGKttlakeLskrl.gf.....g 25
                l++G++G+GKtt++ +L  +l ++      
  KHJ32725.1  7 LVMGPAGSGKTTFCSALMTHLrNNrrscfY 36
                699**************9999555555542 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   1.6e-06    0.0011      27      85 ..       6      67 ..       2     147 .. 0.77

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.6e-06
      AAA_16 27 vllsGesGvGKsslvrellralekdggiflrgkcdqlesaipy...salaqalareellrql 85
                +l+ G++G+GK++   +l+++l+ ++  +++ + d   ++ +    + + ++++ e+++++l
  KHJ32725.1  6 CLVMGPAGSGKTTFCSALMTHLRNNRRSCFYVNLDPAAENFAHepdLDIKDLITLEDVMEEL 67
                89*********************997777777777664443333434466666665555555 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0     1e-05    0.0065     130     170 ..       4      45 ..       1      67 [. 0.72
   2 ?   -2.9   0.0       4.4   2.8e+03      58      82 ..     208     232 ..     203     238 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1e-05
       T2SSE 130 glilvsGgTgsGKttllyallkeinks.derivtvEDpvEiq 170
                 +  lv G+ gsGKtt+  al++ + ++   ++ +  Dp+  +
  KHJ32725.1   4 YGCLVMGPAGSGKTTFCSALMTHLRNNrRSCFYVNLDPAAEN 45 
                 5579******************99888344444444666555 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 4.4
       T2SSE  58 akldiseerplqdarlpekgvrlrv 82 
                 ++++++++rp+ d  +  +g ++++
  KHJ32725.1 208 TEEEVDDSRPPKDVDMVMGGQSFKM 232
                 78999999***99999988888876 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   6.9e-06    0.0044       2      55 ..       3      66 ..       2     103 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 6.9e-06
      AAA_24  2 klkiliyGpsgiGKTtlakel.......gpkplfidtekGlksldadkfpdie...swedflde 55
                k+ +l++Gp+g+GKTt+++ l         + ++++++  + +       di+   ++ed+++e
  KHJ32725.1  3 KYGCLVMGPAGSGKTTFCSALmthlrnnRRSCFYVNLDPAAENFAHEPDLDIKdliTLEDVMEE 66
                67799**************999999988888889999988888877777777755555555554 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   8.5e-06    0.0054       7      48 ..       5      40 ..       1      60 [. 0.85

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 8.5e-06
      AAA_22  7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlp 48
                 ++v+G++G+GKTt +  l+  l +       r+++++v+l 
  KHJ32725.1  5 GCLVMGPAGSGKTTFCSALMTHLRNN------RRSCFYVNLD 40
                579******************99654......8888888875 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.7e-05     0.011       2      48 ..       7      56 ..       6      67 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.7e-05
                EEESSTTSSHHHHHHHHHHHHT...HEEEEEETTTCSSSSTTHHHHHHHH CS
         AAA  2 llyGppGtGKTllakavakelg...vefleisgsellskyvgesekkire 48
                l++Gp G GKT++++a++++l    ++++ +++    +++  e   +i++
  KHJ32725.1  7 LVMGPAGSGKTTFCSALMTHLRnnrRSCFYVNLDPAAENFAHEPDLDIKD 56
                899*****************953345667777666666666665555555 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   5.1e-05     0.033       2      36 ..       7      37 ..       6      63 .. 0.78
   2 ?   -0.9   0.0       3.3   2.1e+03      45      67 ..     191     214 ..     160     232 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 5.1e-05
  RNA_helicase  2 wlyGpsgeGKStlakeLakallkklklkkkdsvys 36
                  ++ Gp+g GK+t++  L+++l     +++++ +y+
    KHJ32725.1  7 LVMGPAGSGKTTFCSALMTHLR----NNRRSCFYV 37
                  689*************888887....444455554 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 3.3
  RNA_helicase  45 dgYtgqevvvidDfgqvkdee.np 67 
                   + + +++v ++dD +q ++ee ++
    KHJ32725.1 191 KRFLDPDVALFDDDYQETEEEvDD 214
                   556678899999999998886554 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.9e-05     0.012      23      50 ..       5      31 ..       1      38 [. 0.83

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.9e-05
      AAA_29 23 gatlltGpsGsGKSTllDAiqalLvpak 50
                g +l++Gp GsGK+T+  A+++ L  ++
  KHJ32725.1  5 G-CLVMGPAGSGKTTFCSALMTHLRNNR 31
                4.89***************999887776 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   2.4e-05     0.015       3      29 ..       6      32 ..       5      59 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 2.4e-05
                EEEEC-TTTCHHHHHHHHHHHHCTS-S CS
       NACHT  3 vilqGeaGsGKTtLlqklalawaegkl 29
                +++ G+aGsGKTt+   l++ ++ ++ 
  KHJ32725.1  6 CLVMGPAGSGKTTFCSALMTHLRNNRR 32
                5799*****************998874 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0     4e-05     0.025      33      69 ..       3      39 ..       1      46 [. 0.87

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 4e-05
       AAA_7 33 kkpvllvGptGtGKtviikdllkkldkekylsltinf 69
                k+ +l++Gp+G+GKt+ ++ l+++l +++ ++  +n+
  KHJ32725.1  3 KYGCLVMGPAGSGKTTFCSALMTHLRNNRRSCFYVNL 39
                5679**********************99888888886 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   3.9e-05     0.025       4      38 ..       6      40 ..       3      43 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.9e-05
                EEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEEES CS
       SRP54  4 illvGlqGaGKTttlaKLaallkkegkkvllvaaD 38
                +l++G+ G+GKTt ++ L  +l+++ +++  v +D
  KHJ32725.1  6 CLVMGPAGSGKTTFCSALMTHLRNNRRSCFYVNLD 40
                5899*********************9999888777 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0     5e-05     0.032       3      34 ..       7      43 ..       6      70 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5e-05
      AAA_33  3 llvGlpGsGKstlaerllkklg.....avllssdtlr 34
                l+ G++GsGK+t+   l+ +l      ++ ++ d + 
  KHJ32725.1  7 LVMGPAGSGKTTFCSALMTHLRnnrrsCFYVNLDPAA 43
                689**************98887777776556665554 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0    0.0017       1.1       4      26 ..       7      30 ..       5      38 .. 0.76
   2 ?    2.8   0.0      0.12        77     117     163 ..     146     191 ..     121     196 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0017
                EEEESTTCCHHHHHHHHH.CT--S CS
        cobW  4 vltGflGsGKTtLlnhll.enrag 26
                ++ G+ GsGKTt+ ++l+ + r++
  KHJ32725.1  7 LVMGPAGSGKTTFCSALMtHLRNN 30
                689**********99999633333 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.12
                 EEEETTTH.CCHCCHHHHHHHHHHTSSEEEEE-HHHHCHC...HHHHH CS
        cobW 117 avvDaknleaeeekieekaedqlaaadllvlnKtDlldee.allekle 163
                 +vvD +++  +++ ++  a  +l++  l +++K+Dl++ + ++ ++l+
  KHJ32725.1 146 FVVDRAKF-FAGTLSAMSAMIMLEVPHLNIMSKMDLVKGQiEK-RELK 191
                 67888787.46777778888999999***********998443.5555 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00017      0.11      13      38 ..       6      31 ..       1      66 [. 0.89
   2 ?   -1.1   0.0       3.3   2.1e+03      69     114 ..     155     208 ..      79     213 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00017
      AAA_19 13 llvtaGpGtGKTrvlkhivallvelg 38
                +lv++++G+GKT+   + +++l +++
  KHJ32725.1  6 CLVMGPAGSGKTTFCSALMTHLRNNR 31
                79*******************99887 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 3.3
      AAA_19  69 atTiHrlal........ldfddlltealelleeaeeekklqeee.llivDEfqdv 114
                 a T+ +++         l++ ++++   + +e++e +++l + + +l+ D +q++
  KHJ32725.1 155 AGTLSAMSAmimlevphLNIMSKMDLVKGQIEKRELKRFL-DPDvALFDDDYQET 208
                 3333333223333333322233333333333455555555.44446666666665 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00021      0.13       3      30 ..      10      38 ..       8      72 .. 0.85
   2 ?   -2.0   0.0       3.9   2.5e+03     111     137 ..     190     214 ..     181     245 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00021
                     ESTTSSHHHHHHHHHHHHHHTTE..EEEE CS
  Thymidylate_kin  3 GlDGaGKttqaellkerlkeegik.vvlt 30
                     G  G+GKtt++ +l+ +l+++ ++  +++
       KHJ32725.1 10 GPAGSGKTTFCSALMTHLRNNRRScFYVN 38
                     677******************99866655 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 3.9
                      GGGTTSE-SEEEEEESSHHHHHTSCCT CS
  Thymidylate_kin 111 nedvllkPdltflldvdpevalkRlak 137
                       + +l  Pd+ ++ d d ++  + + +
       KHJ32725.1 190 LKRFL-DPDVALFDD-DYQETEEEVDD 214
                      45555.899999988.66665555544 PP

>> ArsA_ATPase  Anion-transporting ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00016       0.1       5      41 ..       7      43 ..       5      65 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00016
                 EEEESTTSSHHHHHHHHHHHHHHTTS-EEEEE-STTT CS
  ArsA_ATPase  5 lvgGKGGVGKttvsaatavklsekgkkvllistDPAh 41
                 lv G  G GKtt  +a+ ++l +++++   + +DPA 
   KHJ32725.1  7 LVMGPAGSGKTTFCSALMTHLRNNRRSCFYVNLDPAA 43
                 577889*****************************95 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0    0.0004      0.25      24      58 ..       7      40 ..       4      98 .. 0.84
   2 ?   -0.7   0.0       1.7   1.1e+03     110     129 ..     182     207 ..     152     276 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.0004
    ATPase_2 24 fiYGpegsGKtaLlkeiienledkdkyviyyialr 58
                ++ Gp gsGKt++   +++ l++   +  +y +l 
  KHJ32725.1  7 LVMGPAGSGKTTFCSALMTHLRNNR-RSCFYVNLD 40
                689****************998855.667776665 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.7
    ATPase_2 110 lekikkkgkk......iiiiiDelqk 129
                 + +i+k+  k      ++++ D+ q+
  KHJ32725.1 182 KGQIEKRELKrfldpdVALFDDDYQE 207
                 44444444443444434444444333 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00022      0.14      22      46 ..       7      31 ..       2      49 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00022
      AAA_30 22 vltGpAGtGKttalkalreaweaag 46
                ++ GpAG+GKtt  +al  +++++ 
  KHJ32725.1  7 LVMGPAGSGKTTFCSALMTHLRNNR 31
                789***********99988877664 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00029      0.19      49      84 ..       5      40 ..       1      59 [. 0.84

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00029
   IstB_IS21 49 nivllGpsGvGKshlaialgveavraglsvlfvrve 84
                +++++Gp+G GK+ +  al ++  ++  s ++v ++
  KHJ32725.1  5 GCLVMGPAGSGKTTFCSALMTHLRNNRRSCFYVNLD 40
                6899***************99998888899998776 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0051       3.3      12      42 ..      13      43 ..       9     120 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0051
      AAA_31 12 GvGKTTtsvnlaaalaklgkkvLlvDlDpQa 42
                G GKTT + +l   l ++      v+lDp a
  KHJ32725.1 13 GSGKTTFCSALMTHLRNNRRSCFYVNLDPAA 43
                8999999999999999999999999999965 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00029      0.19      22      64 ..       6      47 ..       2      61 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00029
      ATPase 22 vlitGepGtGKtifalqFlikgaekygepgvfvtveepaedlr 64
                 l++G +G+GKt+f+    ++ +++  + + +v ++  ae++ 
  KHJ32725.1  6 CLVMGPAGSGKTTFCSAL-MTHLRNNRRSCFYVNLDPAAENFA 47
                589************985.555677799999999999988875 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.016        10       6      29 ..       6      29 ..       3      37 .. 0.87
   2 ?    2.9   0.1      0.11        68     111     141 ..     157     192 ..     144     229 .. 0.71

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.016
                EEEEESTTSSHHHHHHHHHHHTTS CS
    GTP_EFTU  6 igiighvDhGKtTLtdrLlyktga 29
                + ++g   +GKtT++ +L++++ +
  KHJ32725.1  6 CLVMGPAGSGKTTFCSALMTHLRN 29
                6899**************988765 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.11
                 HHHHHHHHHHTTTEEEEEEESCGST.....HHHHHH CS
    GTP_EFTU 111 teevlrlalkegvpiivfiNKmDrl.....kaelke 141
                 t   +  ++ ++vp   ++ KmD +     k elk+
  KHJ32725.1 157 TLSAMSAMIMLEVPHLNIMSKMDLVkgqieKRELKR 192
                 666778899999*************77655444444 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.1    0.0017       1.1      43      61 ..       7      25 ..       4      29 .. 0.91
   2 ?   -2.5   0.0       4.2   2.7e+03      81      96 ..     106     123 ..     100     143 .. 0.74
   3 ?    0.2   0.0      0.61   3.9e+02     137     164 ..     184     213 ..     158     246 .. 0.65

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0017
                  EEE--TTSSHHHHHHHHHH CS
  FtsK_SpoIIIE 43 lvaGatgsGKStalntLil 61
                  lv+G  gsGK+t+  +L++
    KHJ32725.1  7 LVMGPAGSGKTTFCSALMT 25
                  9****************97 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 4.2
                   SS.SCGGGTT-TTBSS.. CS
  FtsK_SpoIIIE  81 gv.elsalediphlls.v 96 
                   +  +++ +++ip+l + v
    KHJ32725.1 106 MPgQIELYTHIPILPTlV 123
                   444999999999987744 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.61
                   HHHHHHHT..T---B-TT-........... CS
  FtsK_SpoIIIE 137 eiaedpld..ifgdvflvlDnyddlaaene 164
                   +i++ +l+  +++dv l+ D+y++ ++e  
    KHJ32725.1 184 QIEKRELKrfLDPDVALFDDDYQETEEEVD 213
                   444444441146888999999999888754 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00056      0.36      36      57 ..       6      27 ..       3      39 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00056
      AAA_25 36 allaGapgtGKttlaldlalav 57
                +l++G+ g+GKtt+++ l+ ++
  KHJ32725.1  6 CLVMGPAGSGKTTFCSALMTHL 27
                689**************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                       105  (0.00585643); expected 17.9 (0.001)
Passed Fwd filter:                        28  (0.00156172); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              28  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2154.55
//
Query:       KHJ32726.1  [L=84]
Description: hypothetical protein EV44_g3520 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       269  (0.0150036); expected 358.6 (0.02)
Passed bias filter:                      156  (0.00870099); expected 358.6 (0.02)
Passed Vit filter:                         3  (0.000167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 633.23
//
Query:       KHJ32727.1  [L=366]
Description: hypothetical protein EV44_g3562 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1597  (0.0890736); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.19s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 3123.86
//
Query:       KHJ32728.1  [L=341]
Description: hypothetical protein EV44_g1731 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2489.98
//
Query:       KHJ32729.1  [L=385]
Description: hypothetical protein EV44_g3292 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-06   28.3   0.5    2.7e-06   27.2   0.5    1.6  1  gag_pre-integrs  GAG-pre-integrase domain
     0.0025   17.9   0.2     0.0055   16.8   0.2    1.6  1  Integrase_H2C2   Integrase zinc binding domain


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.5     3e-10   2.7e-06      20      64 ..     242     289 ..     227     290 .. 0.80

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 3e-10
  gag_pre-integrs  20 nkssinlWHrRLGHpsfsrlkkLfk...kgllpglkisksevCeaCql 64 
                      ++++i+  HrR+GHps +rl k+ +   +++ ++l ++  ++C++Cq+
       KHJ32729.1 242 TSQEIRQLHRRFGHPSANRLLKVLEksgHNVSRNLVEKLTKFCTTCQK 289
                      6789999***********99999975444446777777799*****96 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.2   6.2e-07    0.0055       7      55 ..     243     290 ..     240     293 .. 0.91

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 6.2e-07
  Integrase_H2C2   7 keilkeaHdsagHlGiektlerlrrryyWpgmrkdvkkyvksCetCqrr 55 
                      + ++++H   gH+++++ l+ l +  +  + r+ v+k  k C+tCq++
      KHJ32729.1 243 SQEIRQLHRRFGHPSANRLLKVLEKSGHNVS-RNLVEKLTKFCTTCQKH 290
                     56699*********************99998.***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       745  (0.0415528); expected 358.6 (0.02)
Passed bias filter:                      582  (0.0324614); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.39
# Mc/sec: 2939.91
//
Query:       KHJ32730.1  [L=478]
Description: putative serine incorporator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.4e-160  533.7  17.0   3.8e-160  533.5  17.0    1.0  1  Serinc    Serine incorporator (Serinc)
  ------ inclusion threshold ------
        0.8    9.8   0.0        0.8    9.8   0.0    3.5  5  DUF3278   Protein of unknown function (DUF3278)


Domain annotation for each model (and alignments):
>> Serinc  Serine incorporator (Serinc)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  533.5  17.0  4.3e-164  3.8e-160       1     429 []      24     475 ..      24     475 .. 0.94

  Alignments for each domain:
  == domain 1  score: 533.5 bits;  conditional E-value: 4.3e-164
      Serinc   1 cccgsaacslccsscpsiksststRiayalllllssivsvimlsptvekklkkl.....v.lCkqaeaseeCegysaVyRvcfalalfflllallligv 93 
                 +ccg+a+cs++cs+c+++ +s++tRiayal+ll +si+s+iml+p+v++kl++l        C+    ++ C+g+ aV+R++fal +f++++ ++l+gv
  KHJ32730.1  24 SCCGAATCSAVCSACGKCGNSIATRIAYALILLTNSILSWIMLTPWVIQKLQHLtldymEiSCP----DGPCYGWVAVHRINFALGIFHIIMGAILLGV 118
                 6****************************************************65565424688....789**************************** PP

      Serinc  94 ksskdpRaaiqngfWflKlllllglvvlaffipnefflevw.nyvglvgaflFiliqlvLLvDfahswneswvekaeesesklwyaaLllvtlllylla 191
                  ssk+pRa iqngfW++K++++l+l++l+ffip++ff+ +w ny++++ga++F+l++lvLLvD+ahsw+e +++k+e+ e++ w ++L+++t+++y+++
  KHJ32730.1 119 DSSKNPRAVIQNGFWGPKIIAWLVLIILSFFIPESFFF-AWgNYISFAGATAFLLLGLVLLVDLAHSWAEYCLSKMEDDEKSSWRYILVGSTIGMYVAS 216
                 ************************************98.999************************************99******************* PP

      Serinc 192 ialvvllfvffassgCslnkffislnlilcvvvsvvsilpkvqeanprsgLlqssvvslYvtYLtwsalssepddkecnpllssslegtetasvvigli 290
                 +++++++++ffassgC++n+++i+lnli+++v+s +si+p+vqe+np++gL+q+++v++Y+tYLt+sa+s+epddk+cnpl++++  gt+t+svvig+i
  KHJ32730.1 217 LTMTIIMYIFFASSGCAMNQTAITLNLIFFLVTSGISIHPTVQEFNPKAGLAQAAMVAVYCTYLTMSAVSMEPDDKHCNPLVRAQ--GTRTTSVVIGAI 313
                 **********************************************************************************988..9*********** PP

      Serinc 291 ltflcvlYstlraass.........................sqveklr..alkaaeeegalpesaleeeeeeeeekekeeeekkvlddekegvsYsYsf 362
                 +t+l+v+Y+t+raa++                         + ++++r  al++a eeg+lp++al+e+e ++     ++  ++  dde+++++Y+Y++
  KHJ32730.1 314 VTMLTVAYTTTRAATQamtlnstgaiylseddshdlvtkqpNLRQQMRaaALRQAIEEGSLPADALQEDEYDT-----NSGFNTLSDDERSKTQYNYTL 407
                 *************************************99995555666668999999*****99863322222.....22234899************* PP

      Serinc 363 FhfvfflaslYvmmllTnWispe.eaelekvlvgsswaavWvkivssWvcllLYlWtLvAPlvlpdrd 429
                 Fh++ffla+ +v++llT  ++ + ++  ++++vg++++a+Wvki+ssWvc+++Y+WtL AP++lp+r+
  KHJ32730.1 408 FHVIFFLATAWVATLLTMNVEEStKNGDDFAPVGRTYWASWVKIISSWVCYAIYTWTLTAPILLPERF 475
                 *****************998888677779*************************************96 PP

>> DUF3278  Protein of unknown function (DUF3278)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   8.9e-05       0.8      64     124 ..      49     110 ..      29     116 .. 0.78
   2 ?   -0.0   1.4     0.097   8.7e+02      33      86 ..     165     221 ..     148     240 .. 0.64
   3 ?   -1.0   1.9      0.19   1.7e+03      42      83 ..     213     253 ..     205     262 .. 0.51
   4 ?   -3.9   0.1       1.5   1.4e+04      72      89 ..     307     324 ..     300     331 .. 0.58
   5 ?   -1.6   0.0      0.29   2.6e+03      39      62 ..     407     430 ..     395     437 .. 0.52

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 8.9e-05
     DUF3278  64 lilglvl.tnlllvvlvsglYiliaskklglatkeveakdyekavkkivlksikfgl.yfaiv 124
                 ++ +l+l tn++l++++   +++ + ++l l++ e++  d    +  + ++ i f+l +f i+
  KHJ32730.1  49 IAYALILlTNSILSWIMLTPWVIQKLQHLTLDYMEISCPD-GPCYGWVAVHRINFALgIFHII 110
                 55566666****************************9988.5566666666677766444444 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.097
     DUF3278  33 ignnafillwlylli...lslvalllakktpeselilglvltnlllvvlvsglYili 86 
                 +g +af+ll l+ll+    s     l+k  +++++   ++l+ + +++ v++l ++i
  KHJ32730.1 165 AGATAFLLLGLVLLVdlaHSWAEYCLSKMEDDEKSSWRYILVGSTIGMYVASLTMTI 221
                 566777766544433111555555666666655555577777766666666554443 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.19
     DUF3278  42 wlyllilslvalllakktpeselilglvltnlllvvlvsglY 83 
                 ++  l +++++ ++   +   ++    + +nl+++ + sg+ 
  KHJ32730.1 213 YVASLTMTIIMYIFFA-SSGCAMNQTAITLNLIFFLVTSGIS 253
                 3333444444444432.2223444455666777666666665 PP

  == domain 4  score: -3.9 bits;  conditional E-value: 1.5
     DUF3278  72 nlllvvlvsglYiliask 89 
                 +++++ +v++l +++ ++
  KHJ32730.1 307 SVVIGAIVTMLTVAYTTT 324
                 445555555555555544 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 0.29
     DUF3278  39 illwlyllilslvalllakktpes 62 
                 ++  ++ l+   va ll  + +es
  KHJ32730.1 407 LFHVIFFLATAWVATLLTMNVEES 430
                 444444444444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (478 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1206  (0.0672653); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.22s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3622.02
//
Query:       KHJ32731.1  [L=155]
Description: putative csep0475 effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       298  (0.0166211); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 1161.47
//
Query:       KHJ32732.1  [L=512]
Description: putative glucooligosaccharide oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.2e-22   78.1   0.4      8e-22   77.5   0.4    1.3  1  FAD_binding_4  FAD binding domain
    4.9e-12   45.7   1.7    9.2e-12   44.9   1.7    1.5  1  BBE            Berberine and berberine like


Domain annotation for each model (and alignments):
>> FAD_binding_4  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.5   0.4   8.9e-26     8e-22       4     135 ..      69     200 ..      66     204 .. 0.91

  Alignments for each domain:
  == domain 1  score: 77.5 bits;  conditional E-value: 8.9e-26
                    EEEESSHHHHHHHHHHHHHCTSCEEEESSSTTEESTTC..SCCEEEEEETTS--EEEEETTTTEEEEETTSBHHHHHHHHHHHTTECSSGGGTTCG CS
  FAD_binding_4   4 vvrpeseeevaaalrlaneaglpvlvrGgGssllgqav..atggvvldlsrlnrileideeegtatveaGvtlgdlvealaakglllglepgsgip 97 
                    +  p+   ev+a +r+a++ +l+v + GgG+s+++ +   ++g ++++++++ + + +d+++ +a+++ G +lg++++al  +g  +    g++ +
     KHJ32732.1  69 ITMPKISSEVSASIRCATKFQLKVQAKGGGHSYGSFSSggKNGSLIISMENFSD-VIVDQTTFVAKIGTGQRLGNVAQALFNQGKRAL-PHGTCPS 162
                    66788899**************************766659999******99***.679999*******************99987775.4699999 PP

                    SBHHHTTTTT-EETTEEGG--HHGTEEEEEEEETTSEE CS
  FAD_binding_4  98 gtvGGaiatnagGygsekyGlirdnvlglevvladGev 135
                    ++++G+ + +++G  s+ +Gl+ d+++g++v+ladG+ 
     KHJ32732.1 163 VGIAGHALHGGYGLSSRNWGLTIDHIVGMDVILADGQE 200
                    9***********************************85 PP

>> BBE  Berberine and berberine like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.9   1.7     1e-15   9.2e-12       2      45 ..     461     506 ..     460     507 .. 0.96

  Alignments for each domain:
  == domain 1  score: 44.9 bits;  conditional E-value: 1e-15
                 -TTS--GGG-.HHHHHHHHGGG.HHHHHHHHHHH-TT--S--TT-- CS
         BBE   2 YvNyrdldlg.kewgerYFggN.ferLvkvKtkyDPdNvFrneqsI 45 
                 Y+Ny d++l+ +e  ++Y+g+N ++rL  +K+++DP+ +F+n+q++
  KHJ32732.1 461 YINYLDPQLSpNEAADQYYGNNtYNRLLDIKNRVDPNFLFWNPQAV 506
                 **********77********999*********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3739.50
//
Query:       KHJ32733.1  [L=661]
Description: putative monosaccharide transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.6e-103  347.0  18.4   1.9e-103  346.8  18.4    1.0  1  Sugar_tr       Sugar (and other) transporter
    1.5e-27   96.5  22.7    1.7e-27   96.3  16.5    2.1  2  MFS_1          Major Facilitator Superfamily
  ------ inclusion threshold ------
       0.38   11.2   0.1       0.38   11.2   0.1    3.2  4  Peptidase_A24  Type IV leader peptidase family
       0.45   10.5   3.7       0.19   11.7   0.5    2.1  2  TB2_DP1_HVA22  TB2/DP1, HVA22 family


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  346.8  18.4  4.3e-107  1.9e-103       3     452 .]     113     552 ..     111     552 .. 0.95

  Alignments for each domain:
  == domain 1  score: 346.8 bits;  conditional E-value: 4.3e-107
                 HHHHHHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS CS
    Sugar_tr   3 lvaalggllfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgkns 101
                 ++++lg +lfgYd gv+++++t + f   f++ ++ +        +g +v+i+ +Ga+++s+++g++gd++GR+k++l ++++f+ g+ +q aa+    
  KHJ32733.1 113 IFVSLGVFLFGYDQGVMSGIITGPYFKDYFNQPTRAE--------VGTMVAILEIGAFFSSIVVGKVGDIIGRRKTILYGSIIFFTGGTIQTAAT---G 200
                 6789999******************988888888875........578***********************************************...9 PP

                 -TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS---HHHHHH CS
    Sugar_tr 102 vevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllflPESPrylve 200
                 + ++++gR+++GigvG+ s++vP+y+sEi+p++ Rg+l  +  ++ ++G   + +++++ + ++n+  wri+l +q+v+  ll ++ l++ ESPr+l+ 
  KHJ32733.1 201 IPMMLLGRIIAGIGVGMLSTIVPVYQSEISPPHNRGKLACIEFTGNITGYTTSVWVDYFCSFIDNDYSWRIPLMMQCVMGALLGFGSLLIVESPRWLLD 299
                 *************************************************************************************************** PP

                 TT-HHHHHHHHHHHHHC.HHHHHHHHHHHHHHHHHHH.........HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THH..HHH CS
    Sugar_tr 201 kgkeeeakevlaklrge.edadrelaeekdsleaeqeee....kaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsks..llv 292
                 ++++ee   v+a+l g  +  + ++ +e++++++++  +    ++++ e++++  +r r++i++  q+f ql+Gin+i yy+p++fe++g      +l+
  KHJ32733.1 300 NDHDEEGIVVIANLYGGgDIHNAKARDEYREIKMSVLLQrqegEKTYMEMFRR--YRTRVFIAMSAQAFAQLNGINVISYYAPYVFESAGWVGRqaILM 396
                 *************6666477788888888888888777665567777777777..999********************************999999*** PP

                 HHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHH CS
    Sugar_tr 293 tiivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilgivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaia 391
                 t+i g++ f++t+  ++lvd++GRR +ll Ga+ m+++++ ++   +l+ + +     ++++ ++++ a+f+ +wgp+pw++ +E+ p+s+Rsk+++++
  KHJ32733.1 397 TGINGITYFLSTIPPWYLVDHWGRRFILLGGAIAMTLALCSMS--YFLYLDIQ-LTPTLVVASVMIYNAAFGYSWGPIPWLYPPEILPLSIRSKGASLS 492
                 ******************************************9..99999995.999****************************************** PP

                 HHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGGT CS
    Sugar_tr 392 vavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrtleeieelf 452
                 +a+nw +n +++ l+p+++e i+ +  +lv a+ +++++++v+f +pet+g  le++ +lf
  KHJ32733.1 493 TATNWACNWIVGELTPVLQELIT-WRLYLVHAFSCAASFVVVYFVYPETAGMRLEDMGALF 552
                 ***********************.*******************************998776 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.3  16.5   3.8e-31   1.7e-27       2     321 ..     116     471 ..     115     504 .. 0.83
   2 !    3.8   0.8    0.0049        22     136     176 ..     506     541 ..     478     550 .. 0.83

  Alignments for each domain:
  == domain 1  score: 96.3 bits;  conditional E-value: 3.8e-31
       MFS_1   2 llaaflsalarsilgpalpl.alaedlg.ispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlg 98 
                 +l++fl +++ ++ + +++  + ++ ++  + +e+g+++++  +ga+++s+++G ++d +Grr+++l g ++f+ g+++ + a++++++l++r+++G+g
  KHJ32733.1 116 SLGVFLFGYDQGVMSGIITGpYFKDYFNqPTRAEVGTMVAILEIGAFFSSIVVGKVGDIIGRRKTILYGSIIFFTGGTIQTAATGIPMMLLGRIIAGIG 214
                 7899**************999*******889999******************************9999999999997777756**************** PP

       MFS_1  99 agalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg....Wravfyilaivsllafvlfllllpeepperkrkspkeee..... 188
                  g+l +++ ++ ++++p+ +rg+   +  +g+  G+     +  +++  +     Wr + ++ +++++l++  + ll++e+p+    + + ee+     
  KHJ32733.1 215 VGMLSTIVPVYQSEISPPHNRGKLACIEFTGNITGYTTSVWVDYFCS-FIDndysWRIPLMMQCVMGALLGF-GSLLIVESPRWLLDNDHDEEGivvia 311
                 ***********************998888888888888887777444.5555666***************88.556666666666666666666***** PP

       MFS_1 189 ...........................kgtgpaplvpawkallkdpvlwillialllfffgfsg...lltllplylqevlglsglllaglllallalvg 257
                                             + g++   + ++  +++     ++++++ +f+ ++g   ++++ p    e  g+ g  +a l+ ++ ++  
  KHJ32733.1 312 nlygggdihnakardeyreikmsvllqRQEGEKTYMEMFRRYRTRV----FIAMSAQAFAQLNGinvISYYAPYV-FESAGWVG-RQAILMTGINGITY 404
                 *********9999999988888887776666666666899999999....5555555555555555488888885.*******8.************** PP

       MFS_1 258 ailallagrlsdrlgrrrrlllallllllaalglallavt...ssavllllvlvliGfglgfvfpsl 321
                 + + +   +l+d++grr++ll + ++++la++++ ++       +++l++++++++  ++g  ++++
  KHJ32733.1 405 FLSTIPPWYLVDHWGRRFILLGGAIAMTLALCSMSYFLYLdiqLTPTLVVASVMIYNAAFGYSWGPI 471
                 99999999999*****999999999999999999999999887677777777777888888886654 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.0049
       MFS_1 136 lgpllggllasslgWravfyilaivsllafvlfllllpeep 176
                 l+p+l  l++    Wr +++++a+ ++ +fv++++++pe++
  KHJ32733.1 506 LTPVLQELIT----WR-LYLVHAFSCAASFVVVYFVYPETA 541
                 5566666666....99.89************9999998865 PP

>> Peptidase_A24  Type IV leader peptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.2       1.6   7.1e+03      46      71 ..     106     129 ..      87     131 .. 0.70
   2 ?   -2.5   0.2       1.5   6.8e+03      26      36 ..     201     211 ..     180     228 .. 0.48
   3 ?   11.2   0.1   8.5e-05      0.38      37      77 ..     265     320 ..     243     324 .. 0.85
   4 ?    0.5   0.1      0.18     8e+02      40      76 ..     510     555 ..     493     572 .. 0.66

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.6
  Peptidase_A24  46 laqavlgalvgalvlllislvdeqam 71 
                     + ++ +++v ++v+l+   +d+++m
     KHJ32733.1 106 PLVYFTSIFVSLGVFLF--GYDQGVM 129
                    55677788888888888..8888777 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.5
  Peptidase_A24  26 lpllllgvlfa 36 
                    +p++llg ++a
     KHJ32733.1 201 IPMMLLGRIIA 211
                    34444444333 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 8.5e-05
  Peptidase_A24  37 qllllglpnlaqavlgalvgalvllli...............slvdeqamGgGDvk 77 
                    + +++ +p ++q v+gal+g++ ll++               ++v  +  GgGD+ 
     KHJ32733.1 265 NDYSWRIPLMMQCVMGALLGFGSLLIVesprwlldndhdeegIVVIANLYGGGDIH 320
                    56789999******************9****99999999999888999******86 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.18
  Peptidase_A24  40 llglpnlaqavlgalvgalvlllislv.......deqamG..gGDv 76 
                    l  l ++  +++ a+  a+ ++++++v       +++ mG  +GD+
     KHJ32733.1 510 LQELITWRLYLVHAFSCAASFVVVYFVypetagmRLEDMGalFGDA 555
                    4567788888888888888888865553444433444555335665 PP

>> TB2_DP1_HVA22  TB2/DP1, HVA22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.2       2.1   9.4e+03      38      49 ..     403     414 ..     395     415 .. 0.76
   2 ?   11.7   0.5   4.2e-05      0.19      16      66 ..     493     543 ..     482     545 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.1
  TB2_DP1_HVA22  38 dvllswiPfYyl 49 
                     ++ls iP +yl
     KHJ32733.1 403 TYFLSTIPPWYL 414
                    467889999997 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 4.2e-05
  TB2_DP1_HVA22  16 detkwltYWvvfafltvvesladvllswiPfYylfKllfllwlvlpqtqga 66 
                    ++t+w   W+v  +  v+++l+ + l+++  ++ + ++++++ v+p+t g 
     KHJ32733.1 493 TATNWACNWIVGELTPVLQELITWRLYLVHAFSCAASFVVVYFVYPETAGM 543
                    3457********************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (661 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       563  (0.0314016); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 4421.49
//
Query:       KHJ32734.1  [L=569]
Description: putative glucosidase 2 subunit beta protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-41  142.5  12.0    3.7e-23   82.2   0.4    3.4  4  PRKCSH-like      Glucosidase II beta subunit-like
    1.4e-26   93.1   8.9    3.7e-26   91.7   5.0    2.7  2  PRKCSH_1         Glucosidase II beta subunit-like protein
    1.7e-09   38.5   2.3      2e-09   38.3   0.3    2.3  2  PRKCSH           Glucosidase II beta subunit-like protein
  ------ inclusion threshold ------
      0.062   13.4   0.5      0.062   13.4   0.5    3.1  3  Mod_r            Modifier of rudimentary (Mod(r)) protein
       0.18   12.4   0.2       0.63   10.6   0.0    2.0  3  Inhibitor_G39P   Loader and inhibitor of phage G40P


Domain annotation for each model (and alignments):
>> PRKCSH-like  Glucosidase II beta subunit-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.9   0.0   5.2e-22   1.9e-18       8      73 ..      15      77 ..       6      82 .. 0.83
   2 !   82.2   0.4     1e-26   3.7e-23      75     169 ..     100     198 ..      90     205 .. 0.92
   3 ?   -1.2   0.3      0.42   1.5e+03     136     170 ..     242     276 ..     239     281 .. 0.81
   4 ?   -2.0   0.2      0.76   2.7e+03     107     158 ..     424     480 ..     406     486 .. 0.64

  Alignments for each domain:
  == domain 1  score: 66.9 bits;  conditional E-value: 5.2e-22
  PRKCSH-like  8 isllvasavdelrGvapdklelykPdengnwkclnsseiklsfdqvnddycdcPdGsdePGtsace 73
                 is + a  +++ rGv p+  + y+ d    ++c+ +++i l+++qvnddycdcPdGsdePGt+ac+
   KHJ32734.1 15 ISSIAAG-AKRPRGVGPEFAKFYQSD--TGFQCIFNPSITLKLSQVNDDYCDCPDGSDEPGTAACS 77
                 4444333.45679**********976..5699*********************************6 PP

  == domain 2  score: 82.2 bits;  conditional E-value: 1e-26
  PRKCSH-like  75 gkfycaneGyisgyiesfkvddgvcdydiccdGsde....elgkcenkcaeiarkfeelleeankkvkkglkikeelllaakkkldelkkklkeleds 168
                  + fyc+n+ +i++y++  +v+dgvc+y+ ccdGsde      ++c+n+c e+ +++++++  ++++++ +l+ + +l+ +ak  +  +++k+kele +
   KHJ32734.1 100 PGFYCKNKDHIPSYLPLSNVNDGVCEYEFCCDGSDEwarvGGIMCDNRCGEMGKEWKRQQAIKENTLRVALQKRAQLVSEAKSVRSGVEAKVKELERE 197
                  56**********************************76544579**************************************************9986 PP

  PRKCSH-like 169 l 169
                   
   KHJ32734.1 198 T 198
                  5 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.42
  PRKCSH-like 136 kvkkglkikeelllaakkkldelkkklkeledslk 170
                   vk+ ++  ++ ll+   k++ l+k+++ le  l 
   KHJ32734.1 242 LVKIRIDQLRQALLQQVSKNEALEKRVDSLERILS 276
                  6778888888889999999999**99999998775 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 0.76
  PRKCSH-like 107 Gsdeelgkcenkcaeiar.....kfeelleeankkvkkglkikeelllaakkkldel 158
                  G de     e +c e+       +   l+e ++k+ ++g++i+    ++ +k ++el
   KHJ32734.1 424 GKDEIFRALEGHCLEKDSgeytyELCWLKETKQKSKSNGIEIRMGTFTRFDKIREEL 480
                  566655555556655543111003334456667777888999888777766666665 PP

>> PRKCSH_1  Glucosidase II beta subunit-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.046   1.7e+02       5      42 ..     261     298 ..     257     310 .. 0.87
   2 !   91.7   5.0     1e-29   3.7e-26      11     134 ..     406     563 ..     395     567 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.046
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XX-TTTTT- CS
    PRKCSH_1   5 ldeaeedikkieseltklkeeleseyGldDiyRalegr 42 
                  +++e+ ++++e+ l+++ke+ + ++  + + Ra+++ 
  KHJ32734.1 261 NEALEKRVDSLERILSTFKEDYNPNFNDEGVKRAVKAW 298
                 56789999**************************9975 PP

  == domain 2  score: 91.7 bits;  conditional E-value: 1e-29
                 XXXXXXXXXXXXXXXXXXXXXX.XX-TTTTT-EEEEEETTEEEEEETTSEEEE......TTEEEEEEEEEE............................ CS
    PRKCSH_1  11 dikkieseltklkeeleseyGldDiyRalegrevkekigdYeYkvvllesvvq......ddisiGefkkqe............................ 75 
                 + kk ++++   +++l ++yG d+i+Raleg ++++++g+Y+Y++++l+   q       +i +G+f++ +                            
  KHJ32734.1 406 NLKKTDKDQ--KQADLLKDYGKDEIFRALEGHCLEKDSGEYTYELCWLKETKQksksngIEIRMGTFTRFDkireeldgvdsiqvgqlslglssgqdsl 502
                 344444444..77999*************************************88887768999**999999999***********************9 PP

                 ..TTEEEEEE-SB-TTSSC-EEEEEEEE-SS-EEEEEEEEETTEEEEEEEEGGG--XXXXX CS
    PRKCSH_1  76 ..gnklkyekGakCWnGPvRsaiveveCGdenelvsvseaekCeYllkvkspaaCsnvllk 134
                     ++ ye+G++CWnGP R+ +v++ C +en +  + e ekC+Y + v sp+aC+ +  k
  KHJ32734.1 503 neRLVMRYENGQNCWNGPSRETLVVLSCAEENIIWKINEFEKCKYRMDVGSPIACEISSKK 563
                 8777889************************************************655444 PP

>> PRKCSH  Glucosidase II beta subunit-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       2.6   9.4e+03      55      55 ..     311     311 ..     256     348 .. 0.54
   2 !   38.3   0.3   5.6e-13     2e-09       1      81 []     434     516 ..     434     516 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.6
                 - CS
      PRKCSH  55 a 55 
                 +
  KHJ32734.1 311 E 311
                 1 PP

  == domain 2  score: 38.3 bits;  conditional E-value: 5.6e-13
                 X-EEEEEETTEEEEEETTTEEEEE-EETTEE-S--EEEEEE..EEEEEEE-------................---S--EEEEEEEEE-SB- CS
      PRKCSH   1 gkCvsskegwwtYelCygkkvrQfhepekekgksevvLGrfnkeehsewaekneaks...........ystedeekqsnryislkyenGtkC 81 
                 g C+++++g++tYelC+ k+++Q+++     ++ e+++G+f     +++++  e+                +  +++ n  ++++yenG+ C
  KHJ32734.1 434 GHCLEKDSGEYTYELCWLKETKQKSK----SNGIEIRMGTF-----TRFDKIREELDgvdsiqvgqlsLGLSSGQDSLNERLVMRYENGQNC 516
                 57************************....*********99.....444444433334455666777777888999999************9 PP

>> Mod_r  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   2.3      0.26   9.2e+02      48      84 ..     168     205 ..     150     224 .. 0.47
   2 ?   13.4   0.5   1.7e-05     0.062      55     126 ..     246     318 ..     237     323 .. 0.87
   3 ?    2.2   0.4      0.05   1.8e+02      63     101 ..     391     433 ..     382     442 .. 0.62

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.26
       Mod_r  48 knlslepeleelrselqekle.elkelekefeekeqel 84 
                   l+++ +l  + +++ +  e ++kele+e  e+e + 
  KHJ32734.1 168 VALQKRAQLVSEAKSVRSGVEaKVKELERETAELELKD 205
                 34444444444444444444433444444444433332 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 1.7e-05
       Mod_r  55 eleelrselqekleelkelekefeekeqeldellqkfspdallarLqtavaeaeeeSealaeefl.egeield 126
                 ++++lr+ l ++ ++ ++lek+++ +e+ l++  ++++p+++ + ++ av++ e+ + +   + + + e ++d
  KHJ32734.1 246 RIDQLRQALLQQVSKNEALEKRVDSLERILSTFKEDYNPNFNDEGVKRAVKAWEDYAAKKDANTVeDEELDID 318
                 789*************************************************999888877777733446665 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.05
       Mod_r  63 lqeklee....lkelekefeekeqeldellqkfspdallarLq 101
                 l+e++e     l+e++ +  +k q++ +ll+++++d + + L+
  KHJ32734.1 391 LTEAREAyeslLNEINLKKTDKDQKQADLLKDYGKDEIFRALE 433
                 4444444111245555555677777788889999998888776 PP

>> Inhibitor_G39P  Loader and inhibitor of phage G40P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00018      0.63       8      49 ..     273     311 ..     268     314 .. 0.91
   2 ?   -3.4   0.0       4.1   1.5e+04      26      50 ..     388     412 ..     380     422 .. 0.70
   3 ?   -2.8   0.0       2.7   9.6e+03      37      51 ..     417     431 ..     395     435 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00018
  Inhibitor_G39P   8 kiLavlkaaY.PrfyngrskkenkmvvevWadllkdydyklvs 49 
                     +iL+++k  Y P+f    + +  k+ v++W d  +++d ++v+
      KHJ32734.1 273 RILSTFKEDYnPNF----NDEGVKRAVKAWEDYAAKKDANTVE 311
                     79************....99999**********9999999997 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 4.1
  Inhibitor_G39P  26 kkenkmvvevWadllkdydyklvsk 50 
                      ke +   e+  +ll++ ++k+ +k
      KHJ32734.1 388 TKELTEAREAYESLLNEINLKKTDK 412
                     5566666677788888877777665 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 2.7
  Inhibitor_G39P  37 adllkdydyklvska 51 
                     adllkdy    +  a
      KHJ32734.1 417 ADLLKDYGKDEIFRA 431
                     588888887777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1127  (0.0628591); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.43
# Mc/sec: 3945.37
//
Query:       KHJ32735.1  [L=1853]
Description: putative wd repeat domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-28   97.0  51.6    0.00014   22.1   0.4    9.0  9  LRR_4     Leucine Rich repeats (2 copies)
    2.1e-21   75.4  47.0    8.3e-07   28.7   2.3    7.8  7  LRR_8     Leucine rich repeat
    1.7e-08   34.2  17.4    9.4e-05   22.0   0.4    4.4  4  LRR_9     Leucine-rich repeat
  ------ inclusion threshold ------
       0.14   12.8  47.2        4.5    8.2   0.4   12.8 14  LRR_1     Leucine Rich Repeat
       0.33    9.9   2.8       0.15   11.1   0.1    1.8  2  DUF4837   Domain of unknown function (DUF4837)


Domain annotation for each model (and alignments):
>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.4   2.6e-07   0.00093       2      41 ..    1354    1393 ..    1353    1396 .. 0.89
   2 !   19.6   3.5   2.5e-07    0.0009       4      43 ..    1399    1437 ..    1397    1438 .. 0.88
   3 !   18.4   3.5   5.9e-07    0.0021       2      40 ..    1441    1478 ..    1440    1485 .. 0.91
   4 !   13.9   5.9   1.5e-05     0.054       3      38 ..    1487    1521 ..    1485    1526 .. 0.87
   5 !   21.9   0.9   4.6e-08   0.00016       2      39 ..    1508    1546 ..    1507    1548 .. 0.89
   6 !   12.3   0.2   4.8e-05      0.17       1      36 [.    1531    1564 ..    1531    1572 .. 0.86
   7 !   15.7   0.1   4.2e-06     0.015       3      39 ..    1600    1635 ..    1599    1642 .. 0.87
   8 !   22.1   0.4     4e-08   0.00014       2      43 ..    1645    1685 ..    1644    1687 .. 0.90
   9 !   15.7   0.3   4.3e-06     0.015       2      36 ..    1667    1704 ..    1666    1706 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 2.6e-07
                  S--EEE--SS---E-S-HHH.-TT--EEE-.-S-----GGG CS
       LRR_4    2 nLevLdLsnNqltdipllek.lpnLkeLdLsgNnlitdlde 41  
                  +L++++L + +l+++  l + +  LkeLd+ +Nn+i+ ld+
  KHJ32735.1 1354 HLREINLKGKRLKSVHKLDNfCQRLKELDI-SNNQISHLDG 1393
                  79*******9****9999999999******.666*999987 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 2.5e-07
                  -EEE--SS---E-S-HHH-TT--EEE-.-S-----GGGGX CS
       LRR_4    4 evLdLsnNqltdiplleklpnLkeLdLsgNnlitdldeLk 43  
                  +++ +++N+l+d+   + l+nL+++d+ +Nn++++l++Lk
  KHJ32735.1 1399 QNIRINDNCLSDLTAWGHLTNLQYIDV-SNNNLESLSSLK 1437
                  67889**********999*********.666999999886 PP

  == domain 3  score: 18.4 bits;  conditional E-value: 5.9e-07
                  S--EEE--SS---E-S-HHH-TT--EEE-.-S-----GG CS
       LRR_4    2 nLevLdLsnNqltdiplleklpnLkeLdLsgNnlitdld 40  
                  +L++L   nN++t+++++ +l  L +L + +Nn++++l+
  KHJ32735.1 1441 HLRSLRADNNKITSLDGIDQLNGLLTLRM-RNNYVRNLN 1478
                  79***************999*********.999**9994 PP

  == domain 4  score: 13.9 bits;  conditional E-value: 1.5e-05
                  --EEE--SS---E-S-HHH-TT--EEE-.-S----- CS
       LRR_4    3 LevLdLsnNqltdiplleklpnLkeLdLsgNnlitd 38  
                  L++LdL+nNq+  ++++ +l +L++LdL +Nn +t 
  KHJ32735.1 1487 LIELDLRNNQVCNFENIHQLSSLTHLDLVDNN-LTE 1521
                  99**************999*********9993.434 PP

  == domain 5  score: 21.9 bits;  conditional E-value: 4.6e-08
                  S--EEE--SS---E-S-..HHH-TT--EEE-.-S-----G CS
       LRR_4    2 nLevLdLsnNqltdipl..leklpnLkeLdLsgNnlitdl 39  
                  +L++LdL +N+lt+++   +  +++Lk++ L gN +++++
  KHJ32735.1 1508 SLTHLDLVDNNLTEFSIngPITMKSLKYIRLCGN-KLESI 1546
                  8*************99988667*********999.88887 PP

  == domain 6  score: 12.3 bits;  conditional E-value: 4.8e-05
                  SS--EEE--SS---E-S-HHH-TT--EEE-.-S--- CS
       LRR_4    1 pnLevLdLsnNqltdiplleklpnLkeLdLsgNnli 36  
                  ++L+++ L +N+l +i     +pnL+ L+L +N  +
  KHJ32735.1 1531 KSLKYIRLCGNKLESIYVGC-FPNLRLLYLDRN-HL 1564
                  68*************76655.*********888.55 PP

  == domain 7  score: 15.7 bits;  conditional E-value: 4.2e-06
                  --EEE--SS---E-S-HHH-TT--EEE-.-S-----G CS
       LRR_4    3 LevLdLsnNqltdiplleklpnLkeLdLsgNnlitdl 39  
                   ++L Ls+N +++++  + + nL++L L ++  +++l
  KHJ32735.1 1600 VRKLFLSGNFISKLQIESDFLNLQYLELANC-GLESL 1635
                  589*************889*********666.77776 PP

  == domain 8  score: 22.1 bits;  conditional E-value: 4e-08
                  S--EEE--SS---E-S-HHH-TT--EEE-.-S-----GGGGX CS
       LRR_4    2 nLevLdLsnNqltdiplleklpnLkeLdLsgNnlitdldeLk 43  
                  n +v +L+ N ltdi++++++  Lk+L+L gN ++t+l +L 
  KHJ32735.1 1645 NVRVMNLNFNALTDIQPISGILRLKKLYLAGN-RLTRLGSLT 1685
                  78999************999*********999.888887665 PP

  == domain 9  score: 15.7 bits;  conditional E-value: 4.3e-06
                  S--EEE--SS---E-S-HH....H-TT--EEE-.-S--- CS
       LRR_4    2 nLevLdLsnNqltdiplle....klpnLkeLdLsgNnli 36  
                  +L++L+L++N+lt +++l     + p L ++dL gN ++
  KHJ32735.1 1667 RLKKLYLAGNRLTRLGSLTkllfQVPTLSTIDLRGN-PL 1704
                  69***************7766667999******888.54 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.6   1.2e-05     0.045       2      41 ..    1354    1392 ..    1353    1394 .. 0.88
   2 !   23.3   4.1   1.1e-08   3.9e-05       6      61 .]    1401    1452 ..    1396    1452 .. 0.83
   3 !    7.6  12.4   0.00088       3.1       5      61 .]    1466    1519 ..    1462    1519 .. 0.86
   4 !   28.7   2.3   2.3e-10   8.3e-07       1      61 []    1507    1564 ..    1507    1564 .. 0.93
   5 ?    2.8   0.0     0.028     1e+02      25      59 ..    1574    1608 ..    1569    1613 .. 0.87
   6 !   27.4   0.3   5.7e-10     2e-06       2      61 .]    1621    1678 ..    1621    1678 .. 0.97
   7 !    8.3   0.1   0.00052       1.9      26      61 .]    1667    1704 ..    1661    1704 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.2e-05
                  T-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGG CS
       LRR_8    2 nLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttls 41  
                  +L++++L   rl+s+++   + +++Lk+Ld+snN++++l+
  KHJ32735.1 1354 HLREINLKGKRLKSVHKLDNF-CQRLKELDISNNQISHLD 1392
                  899***********9986555.8***************97 PP

  == domain 2  score: 23.3 bits;  conditional E-value: 1.1e-08
                  EE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8    6 LdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61  
                  + +++N l++l  +a  +l+nL+++d snN+l++ls  ++ +L +LrsL  ++N++
  KHJ32735.1 1401 IRINDNCLSDL--TAWGHLTNLQYIDVSNNNLESLS--SLKCLVHLRSLRADNNKI 1452
                  55555555555..45678*****************9..****************97 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.00088
                  EEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8    5 sLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61  
                  +L  +nN+  +l+ +  + l+ L +LdL+nN+   ++   +++L+sL++LdL +N+L
  KHJ32735.1 1466 TLRMRNNYVRNLNFQKSN-LKLLIELDLRNNQVCNFE--NIHQLSSLTHLDLVDNNL 1519
                  677778888888776666.************988885..9***************98 PP

  == domain 4  score: 28.7 bits;  conditional E-value: 2.3e-10
                  TT-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8    1 pnLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61  
                  ++Lt LdL +N+lt+ +     ++++Lk++ L  N+l+++      ++p+Lr L+L++N+L
  KHJ32735.1 1507 SSLTHLDLVDNNLTEFSINGPITMKSLKYIRLCGNKLESIY---VGCFPNLRLLYLDRNHL 1564
                  58**************************************8...55568889*******98 PP

  == domain 5  score: 2.8 bits;  conditional E-value: 0.028
                  TT--EEE--SS---GGGGGGGTT--S-.EEE--SS CS
       LRR_8   25 snLkvLdLsnNllttlspgafsgLpsLrsLdLsgN 59  
                  + L +L+L++ + + l+p ++s    +r+L LsgN
  KHJ32735.1 1574 KYLDSLSLREQCGSALHPSVISEAFEVRKLFLSGN 1608
                  56889999999999999999999999999999999 PP

  == domain 6  score: 27.4 bits;  conditional E-value: 5.7e-10
                  T-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8    2 nLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61  
                  nL++L L n  l+sl+ ++ + l n++v++L+ N lt +  + +sg  +L++L+L gNrL
  KHJ32735.1 1621 NLQYLELANCGLESLPEGFGSMLANVRVMNLNFNALTDI--QPISGILRLKKLYLAGNRL 1678
                  89*************************************..5999*************98 PP

  == domain 7  score: 8.3 bits;  conditional E-value: 0.00052
                  T--EEE--SS---GGG..GGGGTT--S-.EEE--SS-- CS
       LRR_8   26 nLkvLdLsnNllttls..pgafsgLpsLrsLdLsgNrL 61  
                  +Lk L+L  N+lt+l    + + + p L  +dL+gN+L
  KHJ32735.1 1667 RLKKLYLAGNRLTRLGslTKLLFQVPTLSTIDLRGNPL 1704
                  67777777777777642245566667777777777765 PP

>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.4   2.6e-08   9.4e-05       7     116 ..    1340    1446 ..    1334    1448 .. 0.87
   2 !    7.9   5.2   0.00056         2      51     127 ..    1449    1521 ..    1446    1542 .. 0.77
   3 !    9.3   1.0   0.00021      0.75      23     120 ..    1489    1581 ..    1487    1589 .. 0.84
   4 !    9.6   0.1   0.00017       0.6      36      98 ..    1638    1702 ..    1602    1709 .. 0.66

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 2.6e-08
       LRR_9    7 elikqsaqyinaire.reldlrgykipvienlGatldqfdtidlsdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqe 102 
                  e i++++ y +   + re++l+g ++  ++ l     ++  +d+s+n+i +ldg+P  + ++ + +n+n +  ++      l nl+ + ++nn+l++
  KHJ32735.1 1340 EKITEAEPYEPHWEHlREINLKGKRLKSVHKLDNFCQRLKELDISNNQISHLDGVP--RTVQNIRINDNCLSDLTA--WGHLTNLQYIDVSNNNLES 1432
                  55666666666554339***************************************..689999*****9988765..46899************** PP

       LRR_9  103 ladldPlaslkkle 116 
                  l+ l+ l++l++l+
  KHJ32735.1 1433 LSSLKCLVHLRSLR 1446
                  ***********996 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00056
       LRR_9   51 dndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklellsllknpvtn 127 
                  +n+i  ldg+  l+ l tl + nn +++++ + +  l  l el l nn++ ++ +   + +l++l+ l l++n +t+
  KHJ32735.1 1449 NNKITSLDGIDQLNGLLTLRMRNNYVRNLNFQ-KSNLKLLIELDLRNNQVCNFEN---IHQLSSLTHLDLVDNNLTE 1521
                  689**********************9988765.4557778888888887766655...6667777778888887776 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00021
       LRR_9   23 eldlrgykipvienlGatldqfdtidlsdndirk..ldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklel 117 
                  eldlr +++   en+   l  +  +dl dn++ +  ++g   +k lk + l  n++  i  g   + Pnl+ l l  n+l +++    + + k l++
  KHJ32735.1 1489 ELDLRNNQVCNFENIH-QLSSLTHLDLVDNNLTEfsINGPITMKSLKYIRLCGNKLESIYVG---CFPNLRLLYLDRNHLGRVMG---MLKTKYLDS 1578
                  9**************6.68899999*******98324666689*************999876...79***********9988876...556666666 PP

       LRR_9  118 lsl 120 
                  lsl
  KHJ32735.1 1579 LSL 1581
                  666 PP

  == domain 4  score: 9.6 bits;  conditional E-value: 0.00017
       LRR_9   36 nlGatldqfdtidlsdndirkldgfPllkrlktlllnnnrivriae..gleevlPnleelvltnn 98  
                   +G+ l     ++l+ n + +++ +  + rlk l+l+ nr++r++   +l   +P+l+++ l +n
  KHJ32735.1 1638 GFGSMLANVRVMNLNFNALTDIQPISGILRLKKLYLAGNRLTRLGSltKLLFQVPTLSTIDLRGN 1702
                  45556666666677777777777777777777777777777777642244455666666666555 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.8   6.4e+03       3      17 ..      66      80 ..      66      87 .. 0.65
   2 ?   -3.5   0.1         5   1.8e+04       1       9 [.    1354    1362 ..    1354    1371 .. 0.75
   3 ?    8.2   0.4    0.0012       4.5       1      14 [.    1377    1392 ..    1377    1414 .. 0.70
   4 ?    6.5   0.8    0.0045        16       1      17 [.    1419    1435 ..    1419    1440 .. 0.86
   5 ?   -3.3   0.1         5   1.8e+04       1      14 [.    1441    1454 ..    1441    1456 .. 0.81
   6 ?    0.4   0.5      0.46   1.7e+03       2      12 ..    1487    1497 ..    1486    1505 .. 0.81
   7 ?    3.9   0.1     0.032   1.2e+02       1      18 [.    1508    1525 ..    1508    1527 .. 0.85
   8 ?    5.3   0.1     0.011        41       1      23 []    1532    1554 ..    1532    1554 .. 0.94
   9 ?    2.3   0.3      0.11   3.8e+02       1      13 [.    1553    1565 ..    1553    1583 .. 0.86
  10 ?   -0.0   0.0      0.63   2.3e+03       3      18 ..    1601    1616 ..    1600    1620 .. 0.78
  11 ?    4.7   0.0     0.017        62       1      16 [.    1621    1636 ..    1621    1642 .. 0.83
  12 ?   -1.6   0.0       2.1   7.5e+03       1      17 [.    1645    1661 ..    1645    1663 .. 0.85
  13 ?    4.9   0.1     0.016        56       1      17 [.    1667    1683 ..    1667    1690 .. 0.88
  14 ?    2.0   0.0      0.14     5e+02       2      13 ..    1694    1706 ..    1693    1715 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.8
       LRR_1  3 rhLdLsnnpllglpp 17
                rhL+L+  p ++ ++
  KHJ32735.1 66 RHLNLTKTPRSNPSS 80
                8****7766644444 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 5
       LRR_1    1 nLrhLdLsn 9   
                  +Lr+++L +
  KHJ32735.1 1354 HLREINLKG 1362
                  699**9966 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0012
       LRR_1    1 nLrhLdLsnnpl..lg 14  
                  +L++Ld+snn++  l+
  KHJ32735.1 1377 RLKELDISNNQIshLD 1392
                  69*********96633 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.0045
       LRR_1    1 nLrhLdLsnnpllglpp 17  
                  nL+++d+snn+l++l++
  KHJ32735.1 1419 NLQYIDVSNNNLESLSS 1435
                  8***********77654 PP

  == domain 5  score: -3.3 bits;  conditional E-value: 5
       LRR_1    1 nLrhLdLsnnpllg 14  
                  +Lr+L   nn +++
  KHJ32735.1 1441 HLRSLRADNNKITS 1454
                  69999999999865 PP

  == domain 6  score: 0.4 bits;  conditional E-value: 0.46
       LRR_1    2 LrhLdLsnnpl 12  
                  L +LdL+nn+ 
  KHJ32735.1 1487 LIELDLRNNQV 1497
                  789******85 PP

  == domain 7  score: 3.9 bits;  conditional E-value: 0.032
       LRR_1    1 nLrhLdLsnnpllglppn 18  
                  +L+hLdL +n+l+ +++n
  KHJ32735.1 1508 SLTHLDLVDNNLTEFSIN 1525
                  69*********9877765 PP

  == domain 8  score: 5.3 bits;  conditional E-value: 0.011
       LRR_1    1 nLrhLdLsnnpllglppnsfqnL 23  
                  +L+++ L++n l+++   +f nL
  KHJ32735.1 1532 SLKYIRLCGNKLESIYVGCFPNL 1554
                  69******************987 PP

  == domain 9  score: 2.3 bits;  conditional E-value: 0.11
       LRR_1    1 nLrhLdLsnnpll 13  
                  nLr L+L +n+l+
  KHJ32735.1 1553 NLRLLYLDRNHLG 1565
                  8**********94 PP

  == domain 10  score: -0.0 bits;  conditional E-value: 0.63
       LRR_1    3 rhLdLsnnpllglppn 18  
                  r+L Ls+n+++ l+++
  KHJ32735.1 1601 RKLFLSGNFISKLQIE 1616
                  7899*****9766654 PP

  == domain 11  score: 4.7 bits;  conditional E-value: 0.017
       LRR_1    1 nLrhLdLsnnpllglp 16  
                  nL++L L n+ l++lp
  KHJ32735.1 1621 NLQYLELANCGLESLP 1636
                  8***********7554 PP

  == domain 12  score: -1.6 bits;  conditional E-value: 2.1
       LRR_1    1 nLrhLdLsnnpllglpp 17  
                  n r+ +L+ n l++++p
  KHJ32735.1 1645 NVRVMNLNFNALTDIQP 1661
                  67899*****9999887 PP

  == domain 13  score: 4.9 bits;  conditional E-value: 0.016
       LRR_1    1 nLrhLdLsnnpllglpp 17  
                  +L++L+L +n+l++l++
  KHJ32735.1 1667 RLKKLYLAGNRLTRLGS 1683
                  69**********98876 PP

  == domain 14  score: 2.0 bits;  conditional E-value: 0.14
       LRR_1    2 LrhLdLsnnpl.l 13  
                  L ++dL++npl  
  KHJ32735.1 1694 LSTIDLRGNPLtM 1706
                  779*******953 PP

>> DUF4837  Domain of unknown function (DUF4837)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   4.2e-05      0.15      90     158 ..     649     717 ..     640     741 .. 0.91
   2 ?   -4.4   0.3       2.2   7.9e+03     102     133 ..     874     905 ..     862     914 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4.2e-05
     DUF4837  90 ivveikapsaeelaelleknkdsiinlfekaelerlqerlkkkkspekdkkvkekfgvslkvpadyqia 158
                 + ++i++++++el  + e n+ +i + f +  l+r+q+  k+ +++++ k  ++  g++ ++p + +++
  KHJ32735.1 649 TLYRIETNDESELSVTSELNSAKIFQKFSQPVLNRKQATCKQGHESQIVKLKQSHAGIKHNIPCSQDVK 717
                 6799**********************************************999999******9765554 PP

  == domain 2  score: -4.4 bits;  conditional E-value: 2.2
     DUF4837 102 laelleknkdsiinlfekaelerlqerlkkkk 133
                 ++++l++ ++si ++ e  el+++++rl+++k
  KHJ32735.1 874 VQSILASSQKSIAEVREAFELAKKINRLTEEK 905
                 34555666666666666666666666665433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1853 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       777  (0.0433376); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.93u 0.30s 00:00:01.23 Elapsed: 00:00:00.47
# Mc/sec: 11735.23
//
Query:       KHJ32736.1  [L=981]
Description: putative essential cytoplasmic protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.6e-15   55.0   1.6    5.2e-14   52.1   0.1    2.8  2  Atx10homo_assoc  Spinocerebellar ataxia type 10 protein domai
  ------ inclusion threshold ------
      0.012   15.7   0.2      0.028   14.4   0.2    1.6  1  DZR              Double zinc ribbon
        0.1   12.3   0.2        5.3    6.8   0.0    3.0  3  TFA2_Winged_2    TFA2 Winged helix domain 2
       0.32   10.8   2.1          2    8.2   2.1    2.4  1  zinc_ribbon_2    zinc-ribbon domain
       0.61   10.9   4.5       0.91   10.4   1.7    2.6  2  DMAP_binding     DMAP1-binding Domain


Domain annotation for each model (and alignments):
>> Atx10homo_assoc  Spinocerebellar ataxia type 10 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1       0.2   7.1e+02      29      76 ..     170     217 ..     162     231 .. 0.80
   2 !   52.1   0.1   1.4e-17   5.2e-14      16      93 ..     795     872 ..     772     881 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.2
  Atx10homo_assoc  29 leliLsqcniDdnnPfirewailairnLlegneenqelvaeLeakgvv 76 
                       eliLs+    +++  + + +++  rn+l   e +qe+ a+++  ++v
       KHJ32736.1 170 TELILSNYDNLQRDLHFLNCSLIISRNMLAVKETAQEICAAVQIDKAV 217
                      5678887777777777777888999*************9999987765 PP

  == domain 2  score: 52.1 bits;  conditional E-value: 1.4e-17
  Atx10homo_assoc  16 nkevqdkvreldgleliLsqcniDdnnPfirewailairnLlegneenqelvaeLeakgvvdeevLeelgleveided 93 
                      n+ vq+++ +++g+  +L++c++D nn +++e+a+l++++L+eg +e+q++v+eL + + ++ +v ++++ ++e++++
       KHJ32736.1 795 NPIVQKQLLAHEGIMPLLNCCVYDGNNEYLKERATLTMKYLMEGCKEAQDFVKELVPVKQAQVQVQAAARAQAELQSQ 872
                      6789***************************************************98887766666655555555433 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.2   7.8e-06     0.028      14      39 ..       2      28 ..       1      32 [. 0.88

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 7.8e-06
         DZR 14 fCseCgtklkavaa.edrCpsCgekvd 39
                fC eCg++l+a  + ++ C++C+++++
  KHJ32736.1  2 FCIECGNSLPAIRDnHTICSKCKTPLS 28
                9********9877799*******9986 PP

>> TFA2_Winged_2  TFA2 Winged helix domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       2.6   9.2e+03      33      47 ..      96     110 ..      95     118 .. 0.85
   2 ?    6.8   0.0    0.0015       5.3       9      38 ..     823     849 ..     820     858 .. 0.88
   3 ?    1.7   0.0     0.057     2e+02      16      41 ..     901     926 ..     869     933 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2.6
  TFA2_Winged_2  33 ealeeLeaegeilvl 47 
                    + ++ Le+ ++il +
     KHJ32736.1  96 PMIRTLERVRKILAT 110
                    56899*******987 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0015
  TFA2_Winged_2   9 lLkkrpkaeGikvkdLkdswpdveealeeL 38 
                    +Lk+r   + + +k L+++++ ++++++eL
     KHJ32736.1 823 YLKER---ATLTMKYLMEGCKEAQDFVKEL 849
                    56666...7899*****************9 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.057
  TFA2_Winged_2  16 aeGikvkdLkdswpdveealeeLeae 41 
                    +  i+v++   s  dve  ++eLe+ 
     KHJ32736.1 901 KTSIPVETSLTSAQDVEAKIKELEKN 926
                    55677777778999**********95 PP

>> zinc_ribbon_2  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   2.1   0.00056         2       1      23 []       2      27 ..       2      27 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00056
  zinc_ribbon_2  1 fCpnCGaelqd.nakF..CpyCGtpl 23
                   fC +CG+ l+  +++   C++C tpl
     KHJ32736.1  2 FCIECGNSLPAiRDNHtiCSKCKTPL 27
                   899****99855777778****9997 PP

>> DMAP_binding  DMAP1-binding Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1      0.87   3.1e+03      62      90 ..      35      63 ..      17      81 .. 0.68
   2 ?   10.4   1.7   0.00025      0.91      29     101 ..     822     896 ..     819     904 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.87
  DMAP_binding 62 akqqlasletklrdeelssevytekvqaa 90
                  + + ++++et l+d+++s + y+ + +  
    KHJ32736.1 35 SATFRTNRETILPDDQISLRSYLDQKEIE 63
                  55667899999999988888877654433 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00025
  DMAP_binding  29 gyekkklkLLreFlpnslkaenqa.ap.esklsaeakqqlasletklrdeelssevytekvqaalakekerkmal 101
                   +y k+++ L  ++l++  k+ +   +     ++a+++ q a + +   +++ ++ ++++++  a+a++k++k+ +
    KHJ32736.1 822 EYLKERATLTMKYLMEGCKEAQDFvKElVPVKQAQVQVQAAARAQAELQSQSRETGKLQTTRTAFANQKGSKSNS 896
                   8*************966666644456667789999999999999999999999*******999999999998755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (981 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1379  (0.0769145); expected 358.6 (0.02)
Passed bias filter:                      600  (0.0334653); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.77u 0.29s 00:00:01.06 Elapsed: 00:00:00.45
# Mc/sec: 6560.10
//
Query:       KHJ32737.1  [L=226]
Description: hypothetical protein EV44_g5929 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       718  (0.0400469); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1666.61
//
Query:       KHJ32738.1  [L=247]
Description: putative u2 small nuclear ribonucleoprotein a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.4e-56  188.4   0.9    7.7e-56  188.3   0.1    1.4  2  LRR_9        Leucine-rich repeat
    9.7e-07   29.0   5.8    6.2e-06   26.5   3.3    3.1  3  LRR_4        Leucine Rich repeats (2 copies)
    0.00033   20.4   6.9    0.00043   20.0   4.3    2.5  2  LRR_8        Leucine rich repeat
     0.0022   17.5   1.2     0.0042   16.6   1.2    1.4  1  DUF4349      Domain of unknown function (DUF4349)
  ------ inclusion threshold ------
       0.13   12.6   0.6          6    7.3   0.1    2.4  2  Flagellin_C  Bacterial flagellin C-terminal helical region
       0.14   11.6   0.0       0.22   11.0   0.0    1.3  1  Tim29        Translocase of the Inner Mitochondrial membrane 
       0.14   12.2   5.0        8.7    6.7   0.1    4.6  5  LRR_6        Leucine Rich repeat


Domain annotation for each model (and alignments):
>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.3   0.1     3e-59   7.7e-56       3     166 ..       2     164 ..       1     174 [. 0.95
   2 ?   -2.8   0.1       1.5   3.9e+03       7      12 ..     211     216 ..     197     231 .. 0.45

  Alignments for each domain:
  == domain 1  score: 188.3 bits;  conditional E-value: 3e-59
       LRR_9   3 kltaelikqsaqyinairereldlrgykipvienlGatldqfdtidlsdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelq 101
                 +lt+eli+ s +y+n+++ereldlrg+kip ienlG +    d+id++dndi+ l +fP+  rl+tlll+ nri+ i+++l +++Pnl++lvlt+n++ 
  KHJ32738.1   2 RLTTELIQSSLSYLNPLKERELDLRGHKIPAIENLGVA-GPHDAIDFTDNDIQILGNFPFSTRLRTLLLARNRITSIQQNLTNAIPNLTTLVLTSNHFA 99 
                 8***********************************87.568********************************************************* PP

       LRR_9 102 eladldPlaslkklellsllknpvtnkkeyrlyviyklkqlrlldfrkvklkereeaeklfkskk 166
                 +ladld l +++ l+ l ll+npv++k++yrl++i++ +++r +d++kvk  er+ a +lf + +
  KHJ32738.1 100 DLADLDILGEFRFLTHLVLLDNPVSKKEHYRLWIIWRCPSVRFFDYKKVKDVERKRAIDLFGTAE 164
                 *************************************************************7643 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.5
       LRR_9   7 elikqs 12 
                 +li+++
  KHJ32738.1 211 DLIRNA 216
                 222222 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       3.1   7.9e+03      27      33 ..      22      28 ..      21      37 .. 0.45
   2 !   26.5   3.3   2.4e-09   6.2e-06       1      41 [.      62     103 ..      62     107 .. 0.87
   3 !   13.1   0.9   3.8e-05     0.098       1      33 [.      86     121 ..      86     126 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 3.1
                EEE-.-S CS
       LRR_4 27 eLdLsgN 33
                eLdL g 
  KHJ32738.1 22 ELDLRGH 28
                4555433 PP

  == domain 2  score: 26.5 bits;  conditional E-value: 2.4e-09
                 SS--EEE--SS---E-S-.HHH.-TT--EEE-.-S-----GGG CS
       LRR_4   1 pnLevLdLsnNqltdipl.lek.lpnLkeLdLsgNnlitdlde 41 
                 ++L++L L+ N++t+i+  l + +pnL++L L++N    dl +
  KHJ32738.1  62 TRLRTLLLARNRITSIQQnLTNaIPNLTTLVLTSN-HFADLAD 103
                 68*****************9988*********777.6666655 PP

  == domain 3  score: 13.1 bits;  conditional E-value: 3.8e-05
                 SS--EEE--SS-...--E-S-HHH-TT--EEE-.-S CS
       LRR_4   1 pnLevLdLsnNq...ltdiplleklpnLkeLdLsgN 33 
                 pnL++L L +N+   l d++ l+ +  L++L L +N
  KHJ32738.1  86 PNLTTLVLTSNHfadLADLDILGEFRFLTHLVLLDN 121
                 8***********777777777889*******99898 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   4.3   1.7e-07   0.00043       2      40 ..      63     101 ..      62     122 .. 0.83
   2 ?   -1.2   0.0      0.71   1.8e+03      29      53 ..     198     221 ..     197     223 .. 0.73

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 1.7e-07
                 T-SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GG CS
       LRR_8   2 nLtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttl 40 
                 +L++L L +Nr+ts+++   +  +nL++L L++N    l
  KHJ32738.1  63 RLRTLLLARNRITSIQQNLTNAIPNLTTLVLTSNHFADL 101
                 8*********************************76554 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.71
                 EEE--SS---GGGGGGGTT--S-.E CS
       LRR_8  29 vLdLsnNllttlspgafsgLpsLrs 53 
                  L+L++N+ + + ++ +++ +sL++
  KHJ32738.1 198 RLKLTENERKKV-EDLIRNAKSLQE 221
                 588899988888.477777777776 PP

>> DUF4349  Domain of unknown function (DUF4349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   1.2   1.6e-06    0.0042      92     127 ..     196     231 ..     190     234 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.6e-06
     DUF4349  92 eaRlkaleasedrllallekaksvedlleiereLse 127
                 ++Rlk  e +++++++l+++aks+++++++e+eL+e
  KHJ32738.1 196 NSRLKLTENERKKVEDLIRNAKSLQEIIRLEKELNE 231
                 79********************************97 PP

>> Flagellin_C  Bacterial flagellin C-terminal helical region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.044   1.1e+02      20      50 ..      76     105 ..      64     116 .. 0.58
   2 ?    7.3   0.1    0.0024         6      17      59 ..     184     226 ..     169     230 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.044
                  HHHHHHHHHHHHHHHHHCHHHHHHCHHCCHH CS
  Flagellin_C  20 avqnRlesaitnlkaqsenlkaaesrledvD 50 
                  ++q+ l++ai nl++   +++++  +l d D
   KHJ32738.1  76 SIQQNLTNAIPNLTT-LVLTSNHFADLADLD 105
                  344445555555543.335556666666666 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0024
                  HHHHHHHHHHHHHHHHHHHHCHHHHHHCHHCCHHHHHHHHHHH CS
  Flagellin_C  17 elGavqnRlesaitnlkaqsenlkaaesrledvDpaeestrvt 59 
                  +lG++ n+++sa+++lk + +  k+ e  ++++   +e  r++
   KHJ32738.1 184 SLGTAPNKISSANSRLKLTENERKKVEDLIRNAKSLQEIIRLE 226
                  79****************9999999888888887777766665 PP

>> Tim29  Translocase of the Inner Mitochondrial membrane 29
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   8.6e-05      0.22      64     111 ..     193     240 ..     156     242 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 8.6e-05
       Tim29  64 esfedaLleasnelllvseeirnpksdkhvqsleklrnegrlrylsLg 111
                 +s +++L  ++ne   v++ irn ks + + +lek  negr+  ++L 
  KHJ32738.1 193 SSANSRLKLTENERKKVEDLIRNAKSLQEIIRLEKELNEGRIPAATLH 240
                 455778888999999**************************9988886 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.23   5.9e+02       6      15 ..      21      30 ..      21      30 .. 0.90
   2 ?   -0.5   0.0      0.68   1.7e+03       8      16 ..      45      53 ..      44      53 .. 0.83
   3 ?    2.3   0.1     0.085   2.2e+02       2      16 ..      61      75 ..      60      76 .. 0.89
   4 ?    6.7   0.1    0.0034       8.7       3      17 ..      86     100 ..      84     101 .. 0.90
   5 ?   -2.1   0.1       2.3   5.8e+03       4      13 ..     112     121 ..     111     124 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.23
       LRR_6  6 teLdLsgNdI 15
                +eLdL+g++I
  KHJ32738.1 21 RELDLRGHKI 30
                79*****988 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.68
       LRR_6  8 LdLsgNdIg 16
                 d ++NdI+
  KHJ32738.1 45 IDFTDNDIQ 53
                5999***95 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.085
       LRR_6  2 nthLteLdLsgNdIg 16
                +t L++L L+ N I+
  KHJ32738.1 61 STRLRTLLLARNRIT 75
                588**********98 PP

  == domain 4  score: 6.7 bits;  conditional E-value: 0.0034
       LRR_6   3 thLteLdLsgNdIgD 17 
                 ++Lt+L L++N++ D
  KHJ32738.1  86 PNLTTLVLTSNHFAD 100
                 69*********9877 PP

  == domain 5  score: -2.1 bits;  conditional E-value: 2.3
       LRR_6   4 hLteLdLsgN 13 
                  Lt+L L +N
  KHJ32738.1 112 FLTHLVLLDN 121
                 5899987666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      560  (0.0312343); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 1818.99
//
Query:       KHJ32739.1  [L=537]
Description: putative gmp synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-41  139.4   0.1    5.4e-41  138.6   0.1    1.5  1  GMP_synt_C     GMP synthase C terminal domain
    5.9e-38  130.5   0.0    9.6e-38  129.9   0.0    1.3  1  GATase         Glutamine amidotransferase class-I
    4.3e-11   42.4   0.0    5.3e-07   29.0   0.0    2.2  2  NAD_synthase   NAD synthase
    6.2e-05   22.9   0.1    0.00016   21.5   0.1    1.7  1  Peptidase_C26  Peptidase C26
     0.0017   17.9   0.0     0.0085   15.6   0.0    2.0  1  QueC           Queuosine biosynthesis protein QueC
     0.0018   17.1   0.1     0.0072   15.2   0.1    1.8  2  tRNA_Me_trans  tRNA methyl transferase
  ------ inclusion threshold ------
      0.016   14.8   0.1      0.036   13.7   0.1    1.6  1  ThiI           Thiamine biosynthesis protein (ThiI)


Domain annotation for each model (and alignments):
>> GMP_synt_C  GMP synthase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.6   0.1   2.1e-44   5.4e-41       1      92 []     445     536 ..     445     536 .. 0.99

  Alignments for each domain:
  == domain 1  score: 138.6 bits;  conditional E-value: 2.1e-44
                 CCCCTTT-GGGSSEEEEEEEEEEE----------EEEEEEEEE---------B----HHHHHHHHHHHHHHSTT---EEEE---TTTS-S-- CS
  GMP_synt_C   1 eelkkaglykkiwQafavllpvksvGvmgdkRtyeyvvalRaveseDamtadvaelpyevLekissrivnevkgvnrvvyditskPpatiEw 92 
                 +e+kkagly++i+Qa+a+llpvk+vGvmgd R +++v++lRav+++D+mta+++++++e+Lek+s+ri+nev+gv+rvvyd+tskPp+tiE+
  KHJ32739.1 445 DEIKKAGLYNEISQAYAALLPVKAVGVMGDMRVHQQVITLRAVQTTDFMTANIYRFDWEFLEKVSTRICNEVDGVCRVVYDMTSKPPGTIEM 536
                 69*****************************************************************************************6 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.9   0.0   3.7e-41   9.6e-38       3     189 ..      15     197 ..      13     198 .. 0.92

  Alignments for each domain:
  == domain 1  score: 129.9 bits;  conditional E-value: 3.7e-41
                 EESSTSTHHHHHHHHHHTT-EEEEEETTSHHHHHHHTHHSTSEEEEEEESSCTTTTTHHHHHHHHCTSTS-EEEETHHHHHHHHHTTTEEEEEECEEEE CS
      GATase   3 iDnydsvtenlvhalvelgvkvevvpidasaeeilellknpdgilvsgGpgspgvegkieaikearenkiPiLGICLGmQllaiefgrkvvkekekehh 101
                 +D+++++++ ++++l+el+++ e +p+++s++     + +p+gi++sgGp s++  +++ +   ++e +iPiLGIC+G+Q +a   g++v+   e+e+ 
  KHJ32739.1  15 LDFGSQYSHLITRRLRELHIYSEFYPCTQSFSDL---RWKPKGIILSGGPYSVYDAEAPHVDPSIFELGIPILGICYGLQEIAWHHGKNVIAGAEREYG 110
                 8***************************999999...589***************************************************77777776 PP

                 EEEEEEEETTT...CGGTTTTSEEEEEEEEEEEEESGCHHHTTEEEEEEEETTEEEEEEEEETTTEEEESSBTTSTTSTTHHHHHHHHHHH CS
      GATase 102 ggtmrlgddet...allyglknevierhrHryevnpkelepaglevtakseddeelmeiiekknpfvgvQFHPEststpegpellfnflik 189
                  +  +  + ++   al+++l++ ++++++H++++     +p+ ++ + +++++  +++i ++++ ++g+QFHPE+t+tp+g++ll+nf +k
  KHJ32739.1 111 LADVETLKSDSnseALFEDLEDNIRVWMSHGDKLGA---LPHSFRTILTTKNS-PFAGIAHETKHIYGIQFHPEVTHTPKGSQLLKNFAVK 197
                 66655544443467*********************9...***********887.9*********************************987 PP

>> NAD_synthase  NAD synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.0   2.1e-10   5.3e-07       3      83 ..     212     290 ..     210     306 .. 0.79
   2 !   11.1   0.0   6.2e-05      0.16     148     177 ..     385     414 ..     379     417 .. 0.92

  Alignments for each domain:
  == domain 1  score: 29.0 bits;  conditional E-value: 2.1e-10
                   HHHHHHHHHHHHHCTTSEEEEE.E-SSHHHHHHHHHHHHHHTCGEEEEEE--SSSTTHHHH.HHHHHHHHHHTSEEEE---HH CS
  NAD_synthase   3 eelvdflkeyvkkagakgvvlG.lSGGvDSslvaalavkalgkenvlalllPssvsseedv.edalalaenlgievktidikp 83 
                   ++ +d +++ v++   + +vlG +SGGvDS+++a+l  +a+  ++++a+l+ +    ++++ +    l+++lgi+ +++d ++
    KHJ32739.1 212 NKEKDRIRSMVEE---EALVLGaVSGGVDSTVAAKLMFDAI-GDRFHAILVDNGCMRQNECaQVKEILVKELGINLTVVDASD 290
                   5556666777666...56899978*****************.689******955555555505566799********999776 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 6.2e-05
                   BETTTTS-HHHHHHHHHHTT--HHHHCS-- CS
  NAD_synthase 148 lapiaellKtevkeLakelnvPervlkkpP 177
                   ++p+ el+K ev+eL +++++ e++l ++P
    KHJ32739.1 385 IEPLRELFKDEVRELGRQMGISEELLMRHP 414
                   79*************************999 PP

>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.1   6.3e-08   0.00016     102     216 .]      77     180 ..      71     180 .. 0.82

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 6.3e-08
  Peptidase_C26 102 lergvPilgiCrGlqllnvalGGtlyqdieeqsgltdhreheqsaashavkvekgsllaellgseeievnslHhqaikelaeelrveAvaeDgviE 197
                     e g+PilgiC Glq+++   G ++   +e++ gl d         + + + +++ l+++l   ++i+v   H   +  l +++r + +++     
     KHJ32739.1  77 FELGIPILGICYGLQEIAWHHGKNVIAGAEREYGLADVE-------TLKSDSNSEALFEDLE--DNIRVWMSHGDKLGALPHSFRTILTTKNSPFA 163
                    6789*************9999999999998755555442.......2333445666666665..59*************************99999 PP

  Peptidase_C26 198 aieseeakafvlgvQwHPE 216
                     i +e+++  ++g+Q+HPE
     KHJ32739.1 164 GIAHETKH--IYGIQFHPE 180
                    99999955..********9 PP

>> QueC  Queuosine biosynthesis protein QueC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   3.3e-06    0.0085       5     117 ..     231     338 ..     225     412 .. 0.59

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.3e-06
                 E--SSHHHHHHHHHHHHH.-SEEEEEEEESS-TTSHHHHHHHHH.HHHT--.-EEEEE-GGGGGGSCGGG-----------...--------TTHHHHH CS
        QueC   5 llSGGlDSttvlalakke.gkevealtfdYgqrhkkeleaakki.akelgveehkildldllkelggsaLtdeeievpkeeleeeelpntfVpaRNlif 101
                  +SGG+DSt+++ l+ ++ g++ +a+ +d g  +++e   +k+i +kelg+ + +++d + l   g + + d+       e++++ + ntf++   +  
  KHJ32739.1 231 AVSGGVDSTVAAKLMFDAiGDRFHAILVDNGCMRQNECAQVKEIlVKELGI-NLTVVDASDLFLDGLKGIYDD------PEAKRKFIGNTFIDVFEAEA 322
                 48********99887765279**********99888888777763799999.999999874433333333333......23444556666666666666 PP

                 HHHHHHHHHHHT-SEE CS
        QueC 102 lslaasyaealgaeai 117
                 l + as   + + +++
  KHJ32739.1 323 LKIEASAKTHENKSKV 338
                 6655555555555555 PP

>> tRNA_Me_trans  tRNA methyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   2.8e-06    0.0072       3      74 ..     228     292 ..     226     296 .. 0.77
   2 ?   -1.5   0.0      0.32   8.1e+02     164     185 ..     384     405 ..     379     408 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 2.8e-06
  tRNA_Me_trans   3 vvvalSgGVDSsvaaallkeqgyevigvflklweeedeegkeccaeedlkdaerv.aeklgiplevvdfekey 74 
                    v+ a+SgGVDS+vaa l+ ++  +    +l  ++      ++c  ++++++++++  ++lgi+l+vvd ++ +
     KHJ32739.1 228 VLGAVSGGVDSTVAAKLMFDAIGDRFHAIL--VD------NGCMRQNECAQVKEIlVKELGINLTVVDASDLF 292
                    7789************99877655433322..22......3699999999999874689*******9998877 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.32
  tRNA_Me_trans 164 llfPlgeltKeevrkiAkeagl 185
                    l+ Pl el K+evr++ +++g+
     KHJ32739.1 384 LIEPLRELFKDEVRELGRQMGI 405
                    677*************999886 PP

>> ThiI  Thiamine biosynthesis protein (ThiI)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   1.4e-05     0.036       6      57 ..     228     280 ..     221     293 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.4e-05
        ThiI   6 vlaLlSgGiDSpVaaylllkR.Gcrvvlvhlknepgtseeaiekveklaella 57 
                 vl  +SgG+DS Vaa l++   G r +++ ++n  + ++e  ++ e l++ l 
  KHJ32739.1 228 VLGAVSGGVDSTVAAKLMFDAiGDRFHAILVDNGCMRQNECAQVKEILVKELG 280
                 55569*************9744**********999999999888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (537 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.49
# Mc/sec: 3295.05
//
Query:       KHJ32740.1  [L=1545]
Description: putative protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.3e-24   85.3   0.0    7.4e-24   84.5   0.0    1.3  1  Pkinase      Protein kinase domain
    3.8e-12   45.4   8.1     0.0097   16.1   0.1    7.0  7  HEAT         HEAT repeat
    8.2e-07   28.6   0.0    1.5e-06   27.7   0.0    1.4  1  Pkinase_Tyr  Protein tyrosine kinase
    3.2e-06   27.8  19.0    4.8e-05   24.1   0.1    5.2  4  WD40         WD domain, G-beta repeat
    1.6e-05   25.2   0.3        1.2    9.6   0.0    4.1  5  HEAT_2       HEAT repeats
      2e-05   24.3   1.0    0.00056   19.5   0.3    2.4  2  Tti2         Tti2 family
      4e-05   24.0   1.1      0.017   15.7   0.2    3.5  4  HEAT_EZ      HEAT-like repeat
     0.0014   18.0   0.0     0.0023   17.3   0.0    1.3  1  Kinase-like  Kinase-like
  ------ inclusion threshold ------
      0.017   15.3   0.4        3.2    8.0   0.0    2.6  2  RTP1_C1      Required for nuclear transport of RNA pol II C-t
      0.062   13.3   4.5        4.7    7.2   0.1    3.4  3  Cnd1         non-SMC mitotic condensation complex subunit 1
      0.074   13.1   0.8         12    6.1   0.0    2.9  2  Arm          Armadillo/beta-catenin-like repeat


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.5   0.0   4.6e-27   7.4e-24      11     260 ..      35     286 ..      26     288 .. 0.83

  Alignments for each domain:
  == domain 1  score: 84.5 bits;  conditional E-value: 4.6e-27
                 SSEEEEEEEETTTTEEEEEEEEECHCHCHHHH..HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHH CS
     Pkinase  11 sfGkVykaveketgkivAvKkikkekakkkke..kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeakkiakqi 107
                 +f k ++a  ++++ i+ vK+i k  + k +   +++++E ++l+ +  pn + + +++e++++ +lv +y+   +l d+++++  l++ e k +a q+
  KHJ32740.1  35 QFMKSIRA--RNNDGIMLVKVIIKPWTMKFEPykQRIIEEREVLEDI--PNALAYQRIVETDTNGFLVRQYLY-SSLYDRMSTRPFLENIEKKWLAFQL 128
                 44444444..47889999****9998888777889*********975..9**********************9.6699999999999999********* PP

                 HHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.........BCTTTSCGGGS-HHHH........TTSCBSHHHHHHHHHHHHHH CS
     Pkinase 108 legleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.........ltsfvgtseYlAPEvl........keneyskkvDvWslGvilye 189
                 l g++ +Hs+g+ H D+K+eNiL+ + + l ++DF  + + ++  +         +++      YlAPE          +e+ ++ ++D++s G++++e
  KHJ32740.1 129 LCGVRDCHSRGVYHGDIKTENILVTSWNWLYLSDFSSSFKPTTLPEdnpadfsyfFDTAGRRTCYLAPERFraagetpdRESCITWAMDIFSTGCVIAE 227
                 *************************9999*******99887776667889*9997777777788*******9998887666777*************** PP

                 HHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHT CS
     Pkinase 190 lltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellq 260
                 l+ + p+f+    ++ ++    +          + ekl+  +  ++e+++++ ++++ dp+ R+taee l+
  KHJ32740.1 228 LFLEVPIFN---LSQLYKYRRGE---------YKPEKLQLSRIEDPEVREMIASMIQIDPSLRCTAEEYLN 286
                 *********...33322222222.........22333444444489*********************9886 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       3.9   6.3e+03      12      21 ..     259     268 ..     259     270 .. 0.84
   2 !   16.1   0.1     6e-06    0.0097       1      29 [.     436     464 ..     436     466 .. 0.95
   3 ?    5.5   0.0     0.015        24       4      29 ..     487     513 ..     483     515 .. 0.79
   4 ?    0.8   0.0      0.48   7.9e+02       8      28 ..     570     590 ..     568     593 .. 0.90
   5 ?    2.2   0.0      0.18   2.9e+02       1      29 [.     602     630 ..     602     632 .. 0.85
   6 !   13.7   0.1   3.5e-05     0.057       1      29 [.     641     669 ..     641     670 .. 0.96
   7 ?    4.4   0.0     0.034        55       1      22 [.     681     702 ..     681     709 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 3.9
                 SSHHHHHHHH CS
        HEAT  12 pspeVReaAa 21 
                 ++peVRe+ a
  KHJ32740.1 259 EDPEVREMIA 268
                 69****9876 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 6e-06
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 +lP l++ll+D+s  V  aA+++L++l+e
  KHJ32740.1 436 VLPYLVSLLNDKSVIVKVAAIRTLTQLME 464
                 69*************************98 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.015
                 HHHHHHT-.SSHHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsD.pspeVReaAakaLgalae 29 
                 ++l   s+ +sp +R++ a +Lg la 
  KHJ32740.1 487 IFLPSSSSeSSPLIRATYAACLGSLAN 513
                 6666664438999***********995 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.48
                 HHT-SSHHHHHHHHHHHHHHH CS
        HEAT   8 llsDpspeVReaAakaLgala 28 
                 ll+D++ +V +a + ++ +l+
  KHJ32740.1 570 LLTDNDVSVKRALLISIPQLC 590
                 78************9999998 PP

  == domain 5  score: 2.2 bits;  conditional E-value: 0.18
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 +l +l + l+D ++   +a +++++ +++
  KHJ32740.1 602 ILSHLNTYLNDRDWMLKCAFFETIVGVSS 630
                 68888999***********9999987766 PP

  == domain 6  score: 13.7 bits;  conditional E-value: 3.5e-05
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 +lPll+++l+D++ +V ++++ +L+++a+
  KHJ32740.1 641 ILPLLVQALTDSEEFVVKNVLSSLANMAQ 669
                 89************************997 PP

  == domain 7  score: 4.4 bits;  conditional E-value: 0.034
                 HHHHHHHHHT-SSHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAak 22 
                 l++++ + +++p+  +ReaAa 
  KHJ32740.1 681 LVDMVARFCMHPNIWIREAAAM 702
                 57788999************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   9.1e-10   1.5e-06       3     254 ..      27     283 ..      25     287 .. 0.82

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 9.1e-10
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekl 100
                  ++k++G  +f k ++++ +  +    vkV++K  + + +   k++++ee ++++++  pn +++  ++  + + ++v +y+ + +L + + ++  + l
   KHJ32740.1  27 YEKSMGTAQFMKSIRARNN--DGIMLVKVIIKPWTMKFEPY-KQRIIEEREVLEDI--PNALAYQRIVETDTNGFLVRQYL-YSSLYDRMSTR--PFL 116
                  5677888888888887777..77778999999998888777.99*********987..78899999999999999**9998.679*****998..999 PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET..TTSSEE....EETTSSTSGGGGS-HHHHHHSE........EEH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi..ekddey....vkkeeaklpvkWmapEslkekk........fts 184
                  +  ++  +a+q+ +G++  +s+ + H d+ + N+L+++ +   +sDf  + +     +d+     +  ++a  +  ++apE +++          +t 
   KHJ32740.1 117 ENIEKKWLAFQLLCGVRDCHSRGVYHGDIKTENILVTSWNWLYLSDFSSSFKPttLPEDNPadfsYFFDTAGRRTCYLAPERFRAAGetpdrescITW 214
                  9999999****************************************86544311112211223355566778899*******988778899999*** PP

                  HHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHH CS
  Pkinase_Tyr 185 ksDvWsfGvllwEiftlgespypglkneevlekl.kegkrlekpekcpeelyelmkkcweedpeeRptfse 254
                  + D++s G ++ E+f   e p+ +l++   +++   + ++l+  +   +e+ e++ +  + dp+ R t +e
   KHJ32740.1 215 AMDIFSTGCVIAELFL--EVPIFNLSQLYKYRRGeYKPEKLQLSRIEDPEVREMIASMIQIDPSLRCTAEE 283
                  ***************9..89998886666666553666777778888999999999999999999998766 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.1   2.9e-08   4.8e-05       2      38 .]    1110    1147 ..    1109    1147 .. 0.93
   2 ?    1.1   0.6      0.53   8.6e+02       9      36 ..    1164    1194 ..    1156    1195 .. 0.70
   3 ?    0.1   0.3       1.1   1.8e+03      22      38 .]    1326    1344 ..    1322    1344 .. 0.76
   4 !   12.5   0.2   0.00014      0.22      17      38 .]    1412    1433 ..    1395    1433 .. 0.85

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 2.9e-08
                  EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40    2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38  
                  ++++t++ H ++ +++a+ pd+a++++++dD  v+iWd
  KHJ32740.1 1110 TLVTTFSEHtGPLRHIAVAPDHAFFLTAGDDSCVKIWD 1147
                  67899****888*************99999*******9 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.53
                  SS.SS..EEEEEEETTSSEEEEE.ETTSEEEE CS
        WD40    9 GH.ss..vtslafspdgawlasG.sdDgtvri 36  
                  +H ++  ++ ++f  + + ++s+ s +g++ i
  KHJ32740.1 1164 THeTGskISTICFIENTHSFVSCaS-NGSINI 1194
                  5663357999997777777777736.**9976 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 1.1
                  SSEEE.EE.ETTSEEEEEE CS
        WD40   22 gawla.sG.sdDgtvriWd 38  
                  g+w++ +G s  g v +Wd
  KHJ32740.1 1326 GRWVCvAGgSSQGEVTVWD 1344
                  78974355467*******9 PP

  == domain 4  score: 12.5 bits;  conditional E-value: 0.00014
                  EEETTSSEEEEEETTSEEEEEE CS
        WD40   17 afspdgawlasGsdDgtvriWd 38  
                  ++s  +a++++G+ D+++r+Wd
  KHJ32740.1 1412 SNSNKNAFIITGGSDRKIRFWD 1433
                  47888899****88*******9 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       2.2   3.6e+03      38      53 ..     254     269 ..     238     279 .. 0.71
   2 !    8.9   0.1    0.0012         2      27      58 ..     431     462 ..     400     476 .. 0.77
   3 ?   -0.5   0.0         1   1.7e+03      10      30 ..     494     514 ..     485     526 .. 0.60
   4 ?    4.6   0.0     0.025        41      29      55 ..     638     664 ..     567     665 .. 0.58
   5 !    9.6   0.0   0.00072       1.2       1      53 [.     642     702 ..     641     709 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.2
      HEAT_2  38 ellededpavRraaae 53 
                 +l + edp+vR+++a 
  KHJ32740.1 254 QLSRIEDPEVREMIAS 269
                 4555567777766654 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0012
      HEAT_2  27 ignpealpaLvellededpavRraaaeaLgai 58 
                  + +++lp+Lv+ll+d++  v  aa+++L ++
  KHJ32740.1 431 AKLDRVLPYLVSLLNDKSVIVKVAAIRTLTQL 462
                 444589**********************9986 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 1
      HEAT_2  10 ndpdpevrraairaLgrignp 30 
                 + ++p +r++ + +Lg+++n 
  KHJ32740.1 494 SESSPLIRATYAACLGSLANS 514
                 345566666666666665554 PP

  == domain 4  score: 4.6 bits;  conditional E-value: 0.025
      HEAT_2  29 npealpaLvellededpavRraaaeaL 55 
                 ++ +lp+Lv++l+d+++ v +++  +L
  KHJ32740.1 638 EEFILPLLVQALTDSEEFVVKNVLSSL 664
                 334566667777666666666666665 PP

  == domain 5  score: 9.6 bits;  conditional E-value: 0.00072
      HEAT_2   1 ldaLlqalendpdpevrraairaLgrignp.........ealpaLvellededpavRraaae 53 
                 l++L+qal +d+++ v ++++ +L++++           ++++++ +++ +++ ++R+aaa+
  KHJ32740.1 642 LPLLVQAL-TDSEEFVVKNVLSSLANMAQLglfqrsklwRLVDMVARFCMHPNIWIREAAAM 702
                 57899999.89999999999999995555444444445588999999999999999999986 PP

>> Tti2  Tti2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.3   3.4e-07   0.00056      97     201 ..     412     508 ..     400     523 .. 0.81
   2 ?    2.5   0.0     0.052        85     186     213 ..    1448    1475 ..    1445    1530 .. 0.70

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 3.4e-07
        Tti2  97 gdlkaisvlawiirqlqskeieanwplivPpiLnllDdtdtsvKlrGlklLqtlleklesskllkrtGLdsvfedallpcllyLPsltpeeeSlklLra 195
                  ++ka+++l    ++l+++   a++ ++ P +++ll+d+++ vK+ +++ L++l+e ++     +  + +  +e +l  +  +LPs  ++ eS +l+ra
  KHJ32740.1 412 AKVKACDLLLAFSERLTDE---AKLDRVLPYLVSLLNDKSVIVKVAAIRTLTQLMELVKVV---TPVNAHVFLEYILPRMQIFLPS--SSSESSPLIRA 502
                 5666666666666666666...8*********************************99887...666766555666666999****..7889******* PP

        Tti2 196 aYpall 201
                 +Y+a+l
  KHJ32740.1 503 TYAACL 508
                 **9975 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.052
        Tti2  186 eeeSlklLraaYpallsLaklefaeksk 213 
                   +e+ +++ aaYp+++ ++++e++++s 
  KHJ32740.1 1448 LDEARPIFTAAYPTVFLILHTEHSPRSG 1475
                  68999****************9986654 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.2     1e-05     0.017      26      55 .]     433     462 ..     412     462 .. 0.85
   2 ?   -1.9   0.0       3.3   5.3e+03      43      55 .]     499     511 ..     475     524 .. 0.63
   3 ?    4.7   0.0     0.027        44      23      55 .]     635     667 ..     627     667 .. 0.86
   4 ?   -3.0   0.0       7.1   1.1e+04       3      12 ..     696     705 ..     695     717 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1e-05
     HEAT_EZ  26 vpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 ++++lp+L++lLnd+s  V+ aA+++L++l
  KHJ32740.1 433 LDRVLPYLVSLLNDKSVIVKVAAIRTLTQL 462
                 789************************997 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 3.3
     HEAT_EZ  43 eVRaaAagaLgnl 55 
                 ++Ra+ a +Lg l
  KHJ32740.1 499 LIRATYAACLGSL 511
                 4455555555543 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.027
     HEAT_EZ  23 qplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 ++l + ilp+L+++L+d++  V ++++  L+n+
  KHJ32740.1 635 NTLEEFILPLLVQALTDSEEFVVKNVLSSLANM 667
                 567788*************99988888888776 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 7.1
     HEAT_EZ   3 vRraAawaLG 12 
                 +R+aAa+ ++
  KHJ32740.1 696 IREAAAMFIS 705
                 6999999883 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   1.4e-06    0.0023     111     243 ..      80     228 ..      29     278 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.4e-06
  Kinase-like 111 vnallllpaasvdl......eilnkvlqkrsethkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlse 202
                   nal     +++d       + l + l+ r +t+  le+i ++ l  ql+  +   +++g+ hg+++ +n+l      l+l +f++ ++  t    + 
   KHJ32740.1  80 PNALAYQRIVETDTngflvrQYLYSSLYDRMSTRPFLENIEKKWLAFQLLCGVRDCHSRGVYHGDIKTENILVTSWNWLYLSDFSSSFKPTTLPEDNP 177
                  566665555666667777889999**************************************************************999887666444 PP

  Kinase-like 203 ve...........kgfaPpEllgsrggytrknktkmthkldaWqlGlviyri 243
                                 +  pE + ++g  t++++  +t+++d    G vi  +
   KHJ32740.1 178 ADfsyffdtagrrTCYLAPERFRAAGE-TPDRESCITWAMDIFSTGCVIAEL 228
                  447788899999767878888877777.9999999******99999999665 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1     0.023        37      34      71 ..     429     466 ..     399     487 .. 0.72
   2 ?    8.0   0.0     0.002       3.2      37      70 ..     637     670 ..     603     689 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.023
     RTP1_C1  34 avldiekilkllleaLkdedsYvYLnaikgLvaLadvf 71 
                 ++++++++l  l++ L+d+   v ++ai++L++L++ +
  KHJ32740.1 429 DEAKLDRVLPYLVSLLNDKSVIVKVAAIRTLTQLMELV 466
                 66777777777777777777777777777777777654 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.002
     RTP1_C1  37 diekilkllleaLkdedsYvYLnaikgLvaLadv 70 
                   e il ll++aL+d++++v  n+ + L+++a+ 
  KHJ32740.1 637 LEEFILPLLVQALTDSEEFVVKNVLSSLANMAQL 670
                 567899*************************975 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.3     0.046        75      19      49 ..     433     465 ..     430     554 .. 0.69
   2 ?    7.2   0.1    0.0029       4.7      18      73 ..     559     616 ..     554     621 .. 0.91
   3 ?    6.9   0.1    0.0037         6      10      88 ..     589     670 ..     585     719 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.046
        Cnd1  19 veylvepLrkrLkDedpyVRktaaivvakL..i 49 
                 ++ +++ L + L+D++  V+  a+ ++++L  +
  KHJ32740.1 433 LDRVLPYLVSLLNDKSVIVKVAAIRTLTQLmeL 465
                 57788999999****************999552 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0029
        Cnd1  18 lveylvepLrkrLkDedpyVRktaaivvakL.ilndmvkekg.flselaklleDenpr 73 
                 l++ +  + ++ L+D+d  V++  +i + +L +  ++  +++ +ls+l++ l+D + +
  KHJ32740.1 559 LIDIFAHHTKSLLTDNDVSVKRALLISIPQLcVFFGVSNVNDvILSHLNTYLNDRDWM 616
                 77888899999********************9999999999999**********9865 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0037
        Cnd1  10 lg.cirvpnlveylvepLrkrLkDedpyVRktaaivvakL..ilndmvkekgflselaklleDenprVvanalaalteisek 88 
                 l+  + v+n+ + ++++L++ L+D+d + +   + ++  +  +l +   e+ +l  l ++l+D+++ Vv+n+l++l ++++ 
  KHJ32740.1 589 LCvFFGVSNVNDVILSHLNTYLNDRDWMLKCAFFETIVGVssFLGGNTLEEFILPLLVQALTDSEEFVVKNVLSSLANMAQL 670
                 66677899999******************98766666666666666666677899*********************998876 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0    0.0075        12      13      39 ..     436     462 ..     434     464 .. 0.93
   2 ?    4.5   0.2     0.024        39      13      40 ..     641     668 ..     641     669 .. 0.95

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0075
                 HHHHHHHHTTTSSHHHHHHHHHHHHHH CS
         Arm  13 avppLvrLLssedeevqeeAawALsNL 39 
                 ++p Lv+LL+++++ v+ +A ++L+ L
  KHJ32740.1 436 VLPYLVSLLNDKSVIVKVAAIRTLTQL 462
                 7999********************987 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.024
                 HHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm  13 avppLvrLLssedeevqeeAawALsNLa 40 
                 ++p Lv+ L++  e v++++++ L+N+a
  KHJ32740.1 641 ILPLLVQALTDSEEFVVKNVLSSLANMA 668
                 69************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1545 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.93u 0.30s 00:00:01.23 Elapsed: 00:00:00.48
# Mc/sec: 9604.84
//
Query:       KHJ32741.1  [L=108]
Description: putative cbf nf-y family transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.051   13.7   0.2      0.065   13.4   0.2    1.1  1  p25-alpha  p25-alpha


Domain annotation for each model (and alignments):
>> p25-alpha  p25-alpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   3.6e-06     0.065      50     125 ..      15      92 ..       8     105 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.6e-06
   p25-alpha  50 Kvkaksarkitfeqfkealeelaekkfkkkkkeeel...eliekliegkgPklqgvtkatkagavdrltDtskYTGshk 125
                 K   k +r+i++++  +a+++  + +f +++   +l   +++ek +++k+ k +g  ++++++a + l D s Y Gs +
  KHJ32741.1  15 KSERKPRRNIQYRDLATAISNHDNLEFLTDVVPHTLtfkQIKEKKASSKSRKPNG-AAISETEAGQTLLDISSYHGSTQ 92 
                 6778999*************99999999998888888888899999999999999.899*****************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       502  (0.0279993); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 787.48
//
Query:       KHJ32742.1  [L=116]
Description: hypothetical protein EV44_g4278 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.052   14.7   0.0      0.064   14.4   0.0    1.2  1  Cytochrom_C  Cytochrome c


Domain annotation for each model (and alignments):
>> Cytochrom_C  Cytochrome c
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   3.6e-06     0.064      29      85 ..      39      95 ..       5      96 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.6e-06
                 --HHHHHHHTTT-HHHHHHHHTTSS--SSSHHHHHHHGGGGGGG.TT--HHHHHHHH CS
  Cytochrom_C 29 ptlsgaaerasaasigasvanpaavsaprddfekkkltaemparkerlteqeiadla 85
                 ++l +  e++    i a++++ ++++++ +++ k+k+++ + + k+++++q+i+d+ 
   KHJ32742.1 39 AKLGTTKEKRLMIDIAAIRQAYERREISQVIWIKGKSNPADAMTKSQYSNQAIDDIL 95
                 5677778888888999***************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 859.94
//
Query:       KHJ32743.1  [L=652]
Description: putative cell cycle control protein cwf19 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.5e-32  110.5   0.0    9.2e-32  109.5   0.0    1.5  1  CwfJ_C_1     Protein similar to CwfJ C-terminus 1
      4e-27   95.0   0.3      4e-27   95.0   0.3    2.3  2  CwfJ_C_2     Protein similar to CwfJ C-terminus 2
  ------ inclusion threshold ------
       0.11   12.9   0.1        1.4    9.4   0.1    2.7  2  FumaraseC_C  Fumarase C C-terminus


Domain annotation for each model (and alignments):
>> CwfJ_C_1  Protein similar to CwfJ C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.5   0.0   1.5e-35   9.2e-32       2     122 .]     410     535 ..     409     535 .. 0.95

  Alignments for each domain:
  == domain 1  score: 109.5 bits;  conditional E-value: 1.5e-35
                 STHHHHHHHHHH-S----SS---S..S--S-B-SSEEEE---.S-SSTT-EEEEESS--SSTTSS-HHHHHHHHHHHHHHHHHHHHTT--EEEEEE-.. CS
    CwfJ_C_1   2 kekkrikasldsClfClsnpklek..hlivsignkvYlalpk.gpLssgHvliipieHisallsldeevldeirkfrkalvkmykkqdkdavvfEis.. 95 
                 +e k++++ ld+C++C  + k ++  + ++s++ +vYl+lp+  +Ls+g  +i+p+eH+++ll++d+++++eir+f+k+l++my+ q++ ++++E++  
  KHJ32743.1 410 NEYKKMNHILDHCQLCYHEDKKPSpvAPVISLATRVYLTLPTqPELSEGGAVIVPLEHRTNLLECDNDEWEEIRNFMKCLIRMYHDQGRSVIFYENAaa 508
                 67899************99887653389**************899***************************************************999 PP

                 SSS-----EEEEE--HHHHTTHHHHHH CS
    CwfJ_C_1  96 sersvHlaiqvipvpksiskkaelyfk 122
                  +r++H+a++v+p+p s++k+a++ fk
  KHJ32743.1 509 PQRRRHAAMNVVPIPYSLGKMAPAFFK 535
                 9**********************9996 PP

>> CwfJ_C_2  Protein similar to CwfJ C-terminus 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   1.4         3   1.8e+04      80      82 ..      23      25 ..       6      51 .. 0.53
   2 !   95.0   0.3   6.7e-31     4e-27       1      99 []     544     646 ..     544     646 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 3
                --H CS
    CwfJ_C_2 80 eee 82
                e e
  KHJ32743.1 23 ERE 25
                111 PP

  == domain 2  score: 95.0 bits;  conditional E-value: 6.7e-31
                 TT-SS-S---HHHHH.......SHHHHS-SSS--EEEEETTT-..-EEE----HHHH-TT..HHHHHHHHHTT--TTT.SS------S--H.HHHHHHH CS
    CwfJ_C_2   1 ewsqhkklidfskkr.......afrrslvknlpyfyvqfdykgekgyghviedeerfdlq..FareviaglLdlekrrkwrkpkrqskeeeekrveaFk 90 
                 ewsqh+klid+  ++       af++s++k++pyf+ +fd +g  g+gh+ied+ ++++   F revi+g+L+le ++ +rk+ r++ +++  rv++F+
  KHJ32743.1 544 EWSQHRKLIDTAGRSreglgklAFHQSIAKEMPYFHAWFDING--GLGHIIEDSYKWPKGdlFTREVIGGMLNLETEV-IRKQGRWHSNDK--RVQSFR 637
                 8***********8889***************************..*********************************.*******99665..****** PP

                 HHHTTT--X CS
    CwfJ_C_2  91 kawkkyDwT 99 
                 ++w+k+DwT
  KHJ32743.1 638 ERWRKFDWT 646
                 ********9 PP

>> FumaraseC_C  Fumarase C C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       0.3   1.8e+03      19      35 ..     168     184 ..     165     198 .. 0.80
   2 ?    9.4   0.1   0.00023       1.4      12      34 ..     388     410 ..     388     421 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.3
                  HHHHHHT--HHHHHHHT CS
  FumaraseC_C  19 keAlkegktlreavlel 35 
                  ++A  +g+++ e+++e+
   KHJ32743.1 168 RQAEISGRPVDEVAIER 184
                  577779*********96 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00023
                  HHHHHHHHHHHHHT--HHHHHHH CS
  FumaraseC_C  12 ekAakIAkeAlkegktlreavle 34 
                  e+A+ +Ak+ +k++++l+ +++ 
   KHJ32743.1 388 ENASNLAKRVHKSDISLKNIAIN 410
                  79******************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (652 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1962  (0.109432); expected 358.6 (0.02)
Passed bias filter:                      580  (0.0323498); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.31s 00:00:01.03 Elapsed: 00:00:00.46
# Mc/sec: 4296.46
//
Query:       KHJ32744.1  [L=459]
Description: putative tim complex component tim54 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.8e-120  401.1   0.1   5.3e-120  400.6   0.1    1.2  1  Tim54     Inner membrane protein import complex subunit Tim54
  ------ inclusion threshold ------
       0.13   12.5   0.0        2.4    8.4   0.0    2.3  2  GAF_2     GAF domain


Domain annotation for each model (and alignments):
>> Tim54  Inner membrane protein import complex subunit Tim54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  400.6   0.1  5.9e-124  5.3e-120       1     374 []      42     418 ..      42     418 .. 0.89

  Alignments for each domain:
  == domain 1  score: 400.6 bits;  conditional E-value: 5.9e-124
       Tim54   1 npalkmlGl.pnlrlkLPSrnWliFltvlgsitaaiiYDkrekkriqkkwaelvehlakepleveelpRkltvflaaPPgDgLrsarkhfkeYvKpiLv 98 
                 np++k++Gl +n++ +LPSrnW+iFlt++gs++a+++YDkrekkr q kw++lveh+ak++l+++++pRk+ ++l+aPP+DgLr a++hfke++KpiLv
  KHJ32744.1  42 NPMWKYMGLgENFHPRLPSRNWIIFLTIVGSFSATVVYDKREKKRNQLKWCKLVEHVAKQHLDPRKMPRKIAIYLEAPPQDGLRAAQDHFKEFIKPILV 140
                 9********889*************************************************************************************** PP

       Tim54  99 aaalDyevvegrrqGdiRaevAeriRklRrkaeeeekeeeeekeeeelkkleelrkklgieeeegagGviviGRhayKEYirGlhEGlLGPldkpeepe 197
                 +++lD+e+++gr++GdiR +v +ri + R + ee+        e +++  ++++r k+++++ eg+gG+iviGRh++KEYi+GlhEG++   +      
  KHJ32744.1 141 SSGLDWEFIQGRKEGDIREQVIDRIMHSRLSPEEK-------IE-KDF--IAQFRMKNKVTDFEGPGGDIVIGRHTWKEYIQGLHEGWIAIPKDS---- 225
                 *****************************855444.......33.444..699***********************************8644433.... PP

       Tim54 198 eeeaeeeeeeeeeekeeeeeeeeeeeeekeeekeeekeeeeeeeekekkkkvpkpyispedYasaelppeiPellqpvlviplphllGflntpiriyrf 296
                  e+ +++++++++ +++  ++e       + + +++++++ +  +++++   p+py +++ Y  + l + iP++l+p+++i++phllGflntp+riyrf
  KHJ32744.1 226 -EDLASKSQNNNDITDSIISSE-------TPQGDRSSSSDYKLMDSSETLVLPRPYFNTHRYFMSPLLEDIPSELEPSVPISFPHLLGFLNTPKRIYRF 316
                 .222222222222222222222.......22223334444445555568899*********************************************** PP

       Tim54 297 ltrRkladevgrevaavvlakirpyeek........................sekaeqqellkeeEkdWpksvvkkekeekesewvqelvlDeriasrm 371
                 l+rRklad++gre+aa++l+++rpy+                          se+ eqq +l++eEkdW+ksv+ ++++e ++ w  +lvlD+ria+rm
  KHJ32744.1 317 LNRRKLADSIGREIAAAILSSYRPYHIFedlepselstkrnsqyidhnessySESFEQQVALQDEEKDWHKSVWAQQDAEPKRLWSCPLVLDPRIATRM 415
                 **************************9889**********************9**************************99****************** PP

       Tim54 372 rrf 374
                 rr+
  KHJ32744.1 416 RRY 418
                 *97 PP

>> GAF_2  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.037   3.3e+02      86     137 ..     286     334 ..     205     335 .. 0.56
   2 ?    8.4   0.0   0.00027       2.4      65     101 ..     374     408 ..     345     413 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.037
                 HHHTT--EEEEEE-TTS---EEEEES......--HHHHHHHHHHHHHHHHHH CS
       GAF_2  86 ghaglrsflavPlisegrvvGvlnlyankppafdeedlelLeelaeqiaiai 137
                 ++ +   + +vP+    +++G+ln   ++ ++f    + l++++++ ia ai
  KHJ32744.1 286 EDIPSELEPSVPISF-PHLLGFLNT-PKRIYRF-LNRRKLADSIGREIAAAI 334
                 333333446889988.469999995.7777777.777888899988888887 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00027
                 HTS-EEES-GGG-S-HHHHHHHHHTT--EEEEEE-TT CS
       GAF_2  65 tgrpvilndleedpdkkglpaghaglrsflavPlise 101
                 +   v l+d e d++k+ +++++a +++ ++ Pl+ +
  KHJ32744.1 374 Q--QVALQDEEKDWHKSVWAQQDAEPKRLWSCPLVLD 408
                 4..6889999************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.22s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3413.20
//
Query:       KHJ32745.1  [L=328]
Description: putative atp binding [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-72  243.9   0.1    4.8e-72  242.6   0.0    1.6  2  ATP_bind_1       Conserved hypothetical ATP binding protein
    6.9e-06   25.7   0.0    0.00023   20.8   0.0    2.8  1  GTP_EFTU         Elongation factor Tu GTP binding domain
    0.00014   21.9   0.0     0.0025   17.9   0.0    2.3  1  MMR_HSR1         50S ribosome-binding GTPase
    0.00036   20.3   0.0    0.00085   19.1   0.0    1.6  1  AAA_24           AAA domain
    0.00053   19.7   0.0      0.011   15.4   0.0    2.5  3  SRP54            SRP54-type protein, GTPase domain
     0.0006   20.0   0.2     0.0028   17.8   0.0    2.0  2  AAA_33           AAA domain
    0.00064   20.0   0.0     0.0023   18.2   0.0    2.0  1  AAA_22           AAA domain
    0.00078   19.0   0.1      0.046   13.2   0.0    2.8  3  FeoB_N           Ferrous iron transport protein B
     0.0012   18.6   0.0     0.0061   16.3   0.0    2.0  2  PRK              Phosphoribulokinase / Uridine kinase family
     0.0017   18.5   0.0        1.2    9.4   0.0    2.4  2  Roc              Ras of Complex, Roc, domain of DAPkinase
     0.0021   17.1   0.0        1.2    8.1   0.0    2.3  2  MeaB             Methylmalonyl Co-A mutase-associated GTPase 
     0.0025   17.4   0.2       0.73    9.4   0.0    2.6  2  cobW             CobW/HypB/UreG, nucleotide-binding domain
     0.0026   17.7   0.0     0.0086   16.0   0.0    1.8  2  NACHT            NACHT domain
     0.0034   16.6   0.0     0.0078   15.4   0.0    1.5  1  NB-ARC           NB-ARC domain
     0.0065   16.2   0.0      0.012   15.4   0.0    1.3  1  AAA_30           AAA domain
  ------ inclusion threshold ------
      0.011   14.9   0.0      0.055   12.7   0.0    1.9  1  KAP_NTPase       KAP family P-loop domain
      0.013   14.6   0.9       0.27   10.4   0.0    2.5  2  G-alpha          G-protein alpha subunit
      0.017   15.5   0.0       0.04   14.3   0.0    1.6  1  AAA_16           AAA ATPase domain
      0.026   14.0   0.6        1.6    8.2   0.0    3.3  4  Arf              ADP-ribosylation factor family
      0.031   14.2   0.0         14    5.6   0.0    3.3  3  RsgA_GTPase      RsgA GTPase
      0.048   13.4   0.3       0.92    9.2   0.0    2.8  3  PduV-EutP        Ethanolamine utilisation - propanediol utili
      0.054   13.0   0.0       0.12   11.8   0.0    1.5  1  AAA_7            P-loop containing dynein motor region
       0.06   12.8   0.1        9.4    5.6   0.0    2.2  2  SRPRB            Signal recognition particle receptor beta su
      0.067   12.9   0.3       0.54    9.9   0.0    2.1  2  Thymidylate_kin  Thymidylate kinase
       0.11   12.5   0.0       0.32   11.0   0.0    1.9  1  AAA_14           AAA domain
       0.25   11.9   0.0       0.25   11.9   0.0    2.2  2  AAA_18           AAA domain


Domain annotation for each model (and alignments):
>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.6   0.0     7e-75   4.8e-72       1     236 [.      17     278 ..      17     283 .. 0.95
   2 ?   -1.4   0.1       2.4   1.6e+03     181     212 ..     290     319 ..     277     325 .. 0.65

  Alignments for each domain:
  == domain 1  score: 242.6 bits;  conditional E-value: 7e-75
  ATP_bind_1   1 vvGpaGsGKttfvgalseilelrgrsvavvNLDPAaeelpYeaavdirelitledvmedlglgpngalvvaleflresldwldeel...........ek 88 
                 +vG+aGsGKttf+++++ +l++++ +++++NLDPA++++p+e ++dir+ +++++vm+ ++lgpng++ ++l+++++++d++ + l           e 
  KHJ32745.1  17 CVGMAGSGKTTFMQRINAHLHAKKEPPYLINLDPAVRNVPFESNIDIRDSVDYKEVMKSYNLGPNGGILTSLNLFATKIDQIISLLekrstpnsenmET 115
                 59********************************************************************************76666666677655444 PP

  ATP_bind_1  89 eed.dyllfDtPGQielfthseslakiveeLesefalvvvyLvDsqrltdptkfisgllsalsamlrlelPhvvvlnkfDllkeklekeleffedveal 186
                 +++ +++l+DtPGQie+f +s+s+++++++L+s+f++vv y++D++r +++++f+s++l+a+s++++++lP++ v+nk+D+ +  + +++++++d+ea+
  KHJ32745.1 116 QKSlKHILIDTPGQIEVFVWSASGSILLDSLASSFSTVVAYIIDTPRTASTSTFMSNMLYACSILYKTKLPMILVFNKTDVKD--AGFAIDWMTDFEAF 212
                 44469****************************************************************************55..************** PP

  ATP_bind_1 187 slllekee................ekykklaeaiaelleefalvlrflplssekeesiedllslid 236
                 +++l +ee                +++ +l ++++ +leef+ +l+++ +ss +++++e++++++ 
  KHJ32745.1 213 QAALRQEEetgisgginygsgggsGYMGSLLNSMSLMLEEFYNHLSVVEVSSMTGQGVEQFFEAVS 278
                 ***999999****************************************************99985 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.4
  ATP_bind_1 181 edvealslllekeeekykklaeaiaelleefa 212
                 +++e+ ++  + ++ek++k ++++a+l+++++
  KHJ32745.1 290 PELERRKK--QRNDEKMAKREQDLAKLMNDME 319
                 44433333..3334789999999999888865 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   3.3e-07   0.00023       8     188 ..      17     277 ..      12     281 .. 0.64

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 3.3e-07
                 EEESTTSSHHHHHHHHHHHTTSSCHHHHHH...HHHST...........................................HCHSHHHHHHTSCSSCEE CS
    GTP_EFTU   8 iighvDhGKtTLtdrLlyktgaiskkgeka...eeerv...........................................lDtlkeErergiTiksaa 60 
                  +g   +GKtT++ r+ ++++a ++            +                                           +D+     e+  T +s++
  KHJ32745.1  17 CVGMAGSGKTTFMQRINAHLHAKKEPPYLInldP---AvrnvpfesnidirdsvdykevmksynlgpnggiltslnlfatkIDQIISLLEKRSTPNSEN 112
                 5666677777777777777777777665553321...12445667777777777777776666667777777666666666666666677777888888 PP

                 EEEETTCSSEEEEEEEESSSGG.GHHHHHHH.......HHT-SEEEEEEETTTB.....STHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHH CS
    GTP_EFTU  61 isleketkkylinliDtPGHvd.Fskevirg.......lrvlDgavlvvdaveG.....vepqteevlrlalkegvpiivfiNKmDrlkaelkeiveev 146
                 ++++   k+ +  liDtPG ++ F+   + +        +   ++  ++d  +       +++      ++ k ++p+i++ NK D  +a +     + 
  KHJ32745.1 113 METQ---KSLKHILIDTPGQIEvFVWSASGSilldslaSSFSTVVAYIIDTPRTaststFMSNMLYACSILYKTKLPMILVFNKTDVKDAGFAIDWMTD 208
                 8888...899999********977776666544333212222222334444333555558999999999999****************55555444443 PP

                 HHHHHHH...........................HHHHHHHHHTTT..........TTEEEEEEBTTTTBTHHHHHHHH CS
    GTP_EFTU 147 kqklsrk...........................eeklekygekge..........kevpvvfgSalkgegvktlleal 188
                  + +++                                       +          +  +vv +S+++g+gv++++ea+
  KHJ32745.1 209 FEAFQAAlrqeeetgisgginygsgggsgymgslL----------NsmslmleefyNHLSVVEVSSMTGQGVEQFFEAV 277
                 33443332223444566666666666666665552..........04444444455789*****************998 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   3.6e-06    0.0025       2     114 .]      15     193 ..      14     193 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 3.6e-06
                 EEEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEE.................................................... CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgke.................................................... 47 
                 +++vG+  +GK+t+++++    +a+ +      +d+  ++v ++  +                                                    
  KHJ32745.1  15 IVCVGMAGSGKTTFMQRINAHlHAKKEPPYLINLDPAVRNVPFES-Nidirdsvdykevmksynlgpnggiltslnlfatkidqiisllekrstpnsen 112
                 7899999*******9999875455555555666666666665332.12344445555666788888888999999999999999999999999999999 PP

                 ........EEEEECGGCSS...HHHHHHHHHHHHHHHHCTSEEEEEEETT....TTCSHHHHHHHHHHHHH......TTSEEEEEEES CS
    MMR_HSR1  48 ........ielvDtpGlie...gaseekglgkaflaleeadlillvvdas....eeklkpldeeleellee......akkplilvlnk 114
                          +l+DtpG ie    + ++  l +++++   + ++++++d      +         + ++l        +k p+ilv+nk
  KHJ32745.1 113 metqkslkHILIDTPGQIEvfvWSASGSILLDSLAS-SFSTVVAYIIDTPrtasT------STFMSNMLYAcsilykTKLPMILVFNK 193
                 999999999*******87655433444445555554.4479*******5544332......3444444433444444999*******8 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   1.2e-06   0.00085       4      81 ..      14     134 ..      12     169 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1.2e-06
      AAA_24   4 kiliyGpsgiGKTtlakel.......gpkplfidtekGlksldadkfpdie.............swedfldevvel....................... 59 
                  i+++G +g+GKTt++ ++       ++ p +i+++  ++++ +    di+                                                
  KHJ32745.1  14 AIVCVGMAGSGKTTFMQRInahlhakKEPPYLINLDPAVRNVPFESNIDIRdsvdykevmksynL----------Gpnggiltslnlfatkidqiisll 102
                 5899*********************9999********9999999999999977755555555550..........255555555555555555558889 PP

      AAA_24  60 ..........aaeladyktlviDtideleelc 81 
                            + ++ +k + iDt +++e ++
  KHJ32745.1 103 ekrstpnsenMETQKSLKHILIDTPGQIEVFV 134
                 999****9997777779999999988887665 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.6e-05     0.011       2      38 ..      13      49 ..      12      54 .. 0.92
   2 ?    1.1   0.0      0.39   2.7e+02      76      95 ..     113     130 ..      87     134 .. 0.72
   3 ?   -3.0   0.0       6.7   4.6e+03     117     144 ..     199     226 ..     178     228 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.6e-05
                EEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEEES CS
       SRP54  2 nvillvGlqGaGKTttlaKLaallkkegkkvllvaaD 38
                + i+ vG+ G+GKTt + ++ a+l+++++ + l+ +D
  KHJ32745.1 13 TAIVCVGMAGSGKTTFMQRINAHLHAKKEPPYLINLD 49
                67999***********************999999888 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.39
                 HHHHHHTTSSEEEEEE--SS CS
       SRP54  76 vekakeekidvvlvDTaGrl 95 
                 +  + +++  ++l+DT G+ 
  KHJ32745.1 113 M--ETQKSLKHILIDTPGQI 130
                 3..44555889******986 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 6.7
                 EEEEEETTBHTHHHHHHHHHHHHSSCSE CS
       SRP54 117 vllvldattgqeavkqakaFkeavgitg 144
                   + +d +t  ea+++a + +e++gi+g
  KHJ32745.1 199 AGFAIDWMTDFEAFQAALRQEEETGISG 226
                 4566777888888888888888887777 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   4.1e-06    0.0028       2      39 ..      15      57 ..      15     117 .. 0.82
   2 ?   -0.9   0.3       2.5   1.7e+03     110     133 ..     291     314 ..     287     319 .. 0.73

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 4.1e-06
      AAA_33  2 vllvGlpGsGKstlaerl.....lkklgavllssdtlrrrlfg 39
                +++vG++GsGK+t+ +r+     +kk++ +l++ d + r++  
  KHJ32745.1 15 IVCVGMAGSGKTTFMQRInahlhAKKEPPYLINLDPAVRNVPF 57
                689**************86666677777999999988777655 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 2.5
      AAA_33 110 tlkeRlakRaangddrsevpeeal 133
                 +l++R ++R++++ ++ e +++ l
  KHJ32745.1 291 ELERRKKQRNDEKMAKREQDLAKL 314
                 578999999998866656665555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   3.3e-06    0.0023       7      38 ..      14      53 ..      11     125 .. 0.73

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 3.3e-06
      AAA_22  7 ilvvtGesGtGKTtllrrlleqldeeakaee........e 38
                 +v++G +G+GKTt ++r+   l++ +++ +        +
  KHJ32745.1 14 AIVCVGMAGSGKTTFMQRINAHLHAKKEPPYlinldpavR 53
                79*********************87776665665554441 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.19   1.3e+02       2      21 ..      14      33 ..      13      38 .. 0.86
   2 !   13.2   0.0   6.7e-05     0.046      43     126 ..     115     204 ..      80     213 .. 0.82
   3 ?   -0.6   0.0       1.3   8.6e+02     136     155 ..     257     276 ..     246     277 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.19
                EEEEEESTTSSHHHHHHHHH CS
      FeoB_N  2 tvalvGnpnvGkttlfnalt 21
                 +++vG   +Gktt++ ++ 
  KHJ32745.1 14 AIVCVGMAGSGKTTFMQRIN 33
                5899***********99875 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 6.7e-05
                 EETTEEEEEEE----SSSSSSSHHHHHHHHHHHCTSSSEEEEEEE.......GGGHHHHHHHHHHHHHTTSSEEEEEETHHHHHHTTEEE- CS
      FeoB_N  43 klkgkeveivDlPGiYslsayseeekvardflleeepdvvvnvvd.......atnlernLyLtlqllelgvpvvlalnmideaekkgieid 126
                 ++k+ +  ++D PG  ++   s   ++  d l+++   vv  ++d       +t +   Ly    l  +++p++l++n++d+ +++g  id
  KHJ32745.1 115 TQKSLKHILIDTPGQIEVFVWSASGSILLDSLASSFSTVVAYIIDtprtastSTFMSNMLYACSILYKTKLPMILVFNKTDV-KDAGFAID 204
                 335578889************************************4443333345778899999999*************95.66777777 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 1.3
                 S-EEEEBTTTTBTHHHHHHH CS
      FeoB_N 136 vpvvktsakkkegieellka 155
                 + vv++s+ +++g+e++ +a
  KHJ32745.1 257 LSVVEVSSMTGQGVEQFFEA 276
                 579************99876 PP

>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   8.8e-06    0.0061       4      58 ..      17      71 ..      14      89 .. 0.88
   2 ?   -0.7   0.1       1.4   9.9e+02      37      76 ..     277     316 ..     246     322 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 8.8e-06
         PRK  4 vagsSGaGkttvarklekifgrekvkaaeiegdsflrldraekdleleerkrake 58
                  g  G+Gktt++++++  +  +k ++  i++d  +r + +e ++ +++  + ke
  KHJ32745.1 17 CVGMAGSGKTTFMQRINAHLHAKKEPPYLINLDPAVRNVPFESNIDIRDSVDYKE 71
                56899***************************************99999877665 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 1.4
         PRK  37 sflrldraekdleleerkrakekevsflspeandfdllye 76 
                 + ++  +++ d+++e ++r+k+++ + ++ + +d+++l +
  KHJ32745.1 277 VSIKAGEFDRDYKPELERRKKQRNDEKMAKREQDLAKLMN 316
                 3455667888888888888888888888777777777655 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0    0.0017       1.2       2      26 ..      15      39 ..      14      66 .. 0.82
   2 !    7.0   0.0    0.0098       6.7      44     119 ..     119     195 ..      95     196 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0017
                EEEESSTTSSHHHHHHCHCT-CCC- CS
         Roc  2 vvlvGdsgvGKtsllkrfvedkfse 26
                +v+vG +g+GKt++++r+  +   +
  KHJ32745.1 15 IVCVGMAGSGKTTFMQRINAHLHAK 39
                899**************87554444 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0098
                 SGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE.GHHHHCHHHHHHHHHH.HCSSS-EEEEEE-TT CS
         Roc  44 ikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd.srssenlkeWlkelkk.vagkspvilvgnkiD 119
                 +k++  d+   ++++ +W  +G    +sl++++ +  a +i     +++s+ +++ l  ++  + +k p+ilv nk+D
  KHJ32745.1 119 LKHILIDT-PGQIEVFVWSASGSILLDSLASSFSTVVAYIIDTPRtASTSTFMSNMLYACSIlYKTKLPMILVFNKTD 195
                 33433333.3468999****************998776665444423344445555555554156677********99 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0042       2.9      32      68 ..      15      51 ..       6      55 .. 0.86
   2 !    8.1   0.0    0.0017       1.2     171     258 ..     188     311 ..     184     319 .. 0.57

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0042
                EEEEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE--- CS
        MeaB 32 vGltGvPGaGkstlvealglelrrrGkrvavlavDPs 68
                +   G+ G+Gk t+++++ ++l ++ +   ++ +DP+
  KHJ32745.1 15 IVCVGMAGSGKTTFMQRINAHLHAKKEPPYLINLDPA 51
                55679******************99998888888886 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0017
                 EEEEE---HHHHHHHHHHHHHHHHHCST...................................TBTTB--EEEEEBCCCTBSHHHHHHHHHHHHHHHHH CS
        MeaB 171 iivvnkaDkkeaekaarelraaleleee...................................kekeWrpkvlktsavegeGidelvdaieehrevlkk 234
                 i+v nk+D k+a  a  +++     +                                     +e   +  v+++s+++g+G++++++a++  +   ++
  KHJ32745.1 188 ILVFNKTDVKDAGFAIDWMTDFEAFQAAlrqeeetgisgginygsgggsgymgsllnsmslmlEEFYNHLSVVEVSSMTGQGVEQFFEAVSIKAGEFDR 286
                 566666666665555444332222222222233467777777777777777777777666654344445689******************977776666 PP

                 TTH..HHHHHHHHHHHHHHHHHHHHH CS
        MeaB 235 tGl..lekrrrerakeelrelvedel 258
                   +  le+r+++r+ e+ ++  e++l
  KHJ32745.1 287 DYKpeLERRKKQRNDEK-MAKREQDL 311
                 54410444444444433.33344444 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0    0.0011      0.73       2      22 ..      14      34 ..      13      47 .. 0.80
   2 ?    5.3   0.0     0.019        13      73     155 ..     110     199 ..      97     215 .. 0.61

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0011
                EEEEEESTTCCHHHHHHHHHC CS
        cobW  2 vtvltGflGsGKTtLlnhlle 22
                ++v +G  GsGKTt+++++ +
  KHJ32745.1 14 AIVCVGMAGSGKTTFMQRINA 34
                57889***********99873 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.019
                 HHHHHHHHTT-SEEEEEECTTTTHHHHHTTSHHHHH...CCCECEEEEEEETTTH.CCHCCHHHHHHHHHHTSS.........EEEEE-HHHHCH CS
        cobW  73 lealeereerldviliEttGlaePapvafteeelks...dltldavvavvDaknleaeeekieekaedqlaaad.........llvlnKtDllde 155
                  e++e+++ +l +ili t G  e   +  + + l +   +   ++v +++D  +    + ++++ + ++l a++         +lv+nKtD+ d+
  KHJ32745.1 110 SENMETQK-SLKHILIDTPGQIEVFVWSASGSILLDslaSSFSTVVAYIIDTPR----TASTSTFMSNMLYACSilyktklpmILVFNKTDVKDA 199
                 45566666.99*********9999999666444444121222345567999955....5555566666666655111111111457777776665 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.2e-05    0.0086       3      28 ..      15      40 ..      13      48 .. 0.84
   2 ?   -2.0   0.0       4.2   2.9e+03     135     160 ..     250     275 ..     243     280 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.2e-05
                EEEEC-TTTCHHHHHHHHHHHHCTS- CS
       NACHT  3 vilqGeaGsGKTtLlqklalawaegk 28
                ++  G aGsGKTt++q++   + ++k
  KHJ32745.1 15 IVCVGMAGSGKTTFMQRINAHLHAKK 40
                6778**************88887766 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 4.2
                 HCTTSSCE..EEEE--TCCHHHHHHH CS
       NACHT 135 leeqleeaivlevegfsesrrkqlvr 160
                 lee   +  v+ev +++ + ++q+++
  KHJ32745.1 250 LEEFYNHLSVVEVSSMTGQGVEQFFE 275
                 44444555899******999999987 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.1e-05    0.0078      23      45 ..      15      37 ..       7      45 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.1e-05
                EEEEESTTSSHHHHHHHHCCSHC CS
      NB-ARC 23 valvGmgGvGKttlakqilnksd 45
                +  vGm+G+GKtt ++ i+ +++
  KHJ32745.1 15 IVCVGMAGSGKTTFMQRINAHLH 37
                6679**************99865 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.7e-05     0.012      21      46 ..      15      40 ..       7      53 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.7e-05
      AAA_30 21 avltGpAGtGKttalkalreaweaag 46
                 v +G AG+GKtt ++ ++++++a++
  KHJ32745.1 15 IVCVGMAGSGKTTFMQRINAHLHAKK 40
                5789**************99888764 PP

>> KAP_NTPase  KAP family P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0     8e-05     0.055      27     168 ..      19     322 ..       5     327 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 8e-05
  KAP_NTPase  27 gkWGsGKssllnkledelkefa............................................................................. 48 
                 g  GsGK+++ +++   l+ ++                                                                             
  KHJ32745.1  19 GMAGSGKTTFMQRINAHLHAKKeppylinldpavrnvpfesnidirdsvdykevmksynlgpnggiltslnlfatkidqiisllekrstpnsenmetqk 117
                 5559**************999999**********************99988887777777666666666666666666666666666666666666666 PP

  KAP_NTPase  49 ..........................kpvrflfaefnawsfkggddavaellaaLadaleeeygqlatkllrakklkalkikgkiklrkacaiplvlil 121
                                                               ++a+ +++ +                                           
  KHJ32745.1 118 slkhilidtpgqievfvwsasgsillD-------------------SLASSFSTVV------------------------------------------- 154
                 666665553333222222222222220...................2333333333........................................... PP

  KAP_NTPase 122 evalflliegasllavls................................................................................. 139
                                                                                                                    
  KHJ32745.1 155 -----------------Ayiidtprtaststfmsnmlyacsilyktklpmilvfnktdvkdagfaidwmtdfeafqaalrqeeetgisgginygsgggs 236
                 .................1333333333333333333333333333333333333333333333333333344455566667777777788888899999 PP

  KAP_NTPase 140 .........................................................raaklkeeaplkklqteveelladmektL 168
                                                                          r +k + ++++ k+ ++ ++l++dme ++
  KHJ32745.1 237 gymgsllnsmslmleefynhlsvvevssmtgqgveqffeavsikagefdrdykpeleRRKKQRNDEKMAKREQDLAKLMNDMEVSI 322
                 *********************************************************999**********************9766 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00039      0.27      25      50 ..      14      40 ..       6     126 .. 0.75
   2 ?    2.0   0.2      0.13        92     268     281 ..     183     196 ..     159     197 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00039
                EEEEEESTTSSHHHHHHHHH.HHCS-- CS
     G-alpha 25 kllllGqseSGKsTilkqlk.llykkg 50
                 ++++G ++SGK+T+++ +   l+ k+
  KHJ32745.1 14 AIVCVGMAGSGKTTFMQRINaHLHAKK 40
                699***************997777665 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.13
                 TTSEEEEEEE-HHH CS
     G-alpha 268 kntpiiLflnKlDi 281
                  + p+iL++nK+D+
  KHJ32745.1 183 TKLPMILVFNKTDV 196
                 5789*********6 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   5.8e-05      0.04      24      51 ..      12      39 ..       4     119 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5.8e-05
      AAA_16 24 pelvllsGesGvGKsslvrellralekd 51
                p +++++G++G+GK++ ++++  +l ++
  KHJ32745.1 12 PTAIVCVGMAGSGKTTFMQRINAHLHAK 39
                5899*****************9988877 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0    0.0022       1.6      16      46 ..      14      44 ..       5      78 .. 0.86
   2 ?    1.4   0.0      0.27   1.9e+02      86     130 ..     155     199 ..     148     210 .. 0.67
   3 ?   -0.7   0.0       1.2   8.1e+02     146     171 ..     254     277 ..     242     280 .. 0.78
   4 ?   -3.2   0.2       6.9   4.7e+03      95     113 ..     302     320 ..     299     322 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0022
                EEEEEESTTSSHHHHHHHHHHSSCEECSSSS CS
         Arf 16 rilllGLDnaGKtTilkklkleelvttvPTi 46
                 i+ +G+ ++GKtT +++++ +  ++  P  
  KHJ32745.1 14 AIVCVGMAGSGKTTFMQRINAHLHAKKEPPY 44
                6999***************998888777755 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.27
                 EEEEETT-CTTHHHHHHHHHHHCTSGCCT...TSEEEEEEE-TTSTTS CS
         Arf  86 ifvvDsadreRleeakeeLkalleeeelk...evallvlaNKqDlpea 130
                  +++D+    R +++++ ++++l    +    + +++++ NK D+++a
  KHJ32745.1 155 AYIIDTP---RTASTSTFMSNMLYACSILyktKLPMILVFNKTDVKDA 199
                 4555544...555555555555554443222388999999****9987 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 1.2
                 SSSSSEEEEEEBTTTTBTHHHHHHHH CS
         Arf 146 kgkrkleiqkcsavkgeglkeglewl 171
                    ++l+++++s ++g+g+++ +e +
  KHJ32745.1 254 Y--NHLSVVEVSSMTGQGVEQFFEAV 277
                 4..68999***********9988866 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 6.9
                 TTHHHHHHHHHHHCTSGCC CS
         Arf  95 eRleeakeeLkalleeeel 113
                 e++++ +++L++l+++ e+
  KHJ32745.1 302 EKMAKREQDLAKLMNDMEV 320
                 6788888889999888765 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0      0.02        14     101     125 ..      14      38 ..       6      80 .. 0.90
   2 ?    0.8   0.0      0.59   4.1e+02     144     161 ..     110     129 ..      84     135 .. 0.74
   3 ?    3.2   0.0       0.1        71      42      63 ..     180     201 ..     153     222 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.02
                  EEEEECSTTSSHHHHHHHHCTT--- CS
  RsgA_GTPase 101 tsvlvGqSGvGKStLinallpelel 125
                   +v vG  G GK+t++ +++ +l++
   KHJ32745.1  14 AIVCVGMAGSGKTTFMQRINAHLHA 38 
                  57899*************9988665 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.59
                  EEEEEETT..TEEEESS-SS CS
  RsgA_GTPase 144 vellelae..gglliDtPGf 161
                  +e +e ++  + +liDtPG 
   KHJ32745.1 110 SENMETQKslKHILIDTPGQ 129
                  44455544346789****95 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.1
                  HHHTT-EEEEEEE-GGG--HHH CS
  RsgA_GTPase  42 aeekgiepvivlnKiDlleeee 63 
                  + ++++++++v+nK+D+ +   
   KHJ32745.1 180 LYKTKLPMILVFNKTDVKDAGF 201
                  568899**********987655 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0    0.0013      0.92       4      23 ..      15      34 ..      13      47 .. 0.87
   2 ?    0.3   0.0      0.79   5.5e+02      37      46 ..     120     129 ..     110     174 .. 0.74
   3 ?   -1.7   0.0       3.2   2.2e+03     123     140 ..     259     276 ..     254     279 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0013
   PduV-EutP  4 illiGkvgsGKttLtqalkg 23
                i+ +G  gsGKtt +q+++ 
  KHJ32745.1 15 IVCVGMAGSGKTTFMQRINA 34
                7899*************986 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.79
   PduV-EutP  37 sdeviDtPGe 46 
                 ++ +iDtPG+
  KHJ32745.1 120 KHILIDTPGQ 129
                 5567999998 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 3.2
   PduV-EutP 123 ifevsavekegieellky 140
                 + evs+++ +g+e+ ++ 
  KHJ32745.1 259 VVEVSSMTGQGVEQFFEA 276
                 678999999999998876 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00018      0.12      35      70 ..      14      49 ..       9      64 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00018
       AAA_7 35 pvllvGptGtGKtviikdllkkldkekylsltinfs 70
                 +++vG +G+GKt+ ++++  +l+ +k  +  in+ 
  KHJ32745.1 14 AIVCVGMAGSGKTTFMQRINAHLHAKKEPPYLINLD 49
                6899*******************9999888888876 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.014       9.4       5      26 ..      14      35 ..      10      45 .. 0.84
   2 ?    4.9   0.1     0.022        15      40     125 ..     110     197 ..      84     202 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.014
                EEEEE-STTSSHHHHHHHHHHS CS
       SRPRB  5 avllvGlsdsGKTslftrLttd 26
                a++ vG+  sGKT++++r+   
  KHJ32745.1 14 AIVCVGMAGSGKTTFMQRINAH 35
                7899***********9998765 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.022
                 ETTG...GGTT-SEEEETT-GCCS.HHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHHHHHHHHHHHH.TT---EEEEEE-TTST CS
       SRPRB  40 alkvksekgskltliDfPGheklr.qklleklkaksslkglvfvvDStidpkevkevAEllyeillitekl.kdavdiliACnKqelf 125
                 +++++++k  k  liD PG+ ++     + +++  s + +   vv   id  +  ++  ++ ++l    +l k ++++++  nK ++ 
  KHJ32745.1 110 SENMETQKSLKHILIDTPGQIEVFvWSASGSILLDSLASSFSTVVAYIIDTPRTASTSTFMSNMLYACSILyKTKLPMILVFNKTDVK 197
                 3445678888999******976550455555555555888888888889999999999999999987655449999999999999875 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00078      0.54       3      28 ..      19      45 ..      19      54 .. 0.86
   2 ?   -0.1   0.5      0.93   6.4e+02     130     157 ..     290     316 ..     284     325 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00078
                     ESTTSSHHHHHHHHHHHHHHTTE..EE CS
  Thymidylate_kin  3 GlDGaGKttqaellkerlkeegik.vv 28
                     G+ G+GKtt+++ + ++l+++++  ++
       KHJ32745.1 19 GMAGSGKTTFMQRINAHLHAKKEPpYL 45
                     889****************99876555 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.93
                      HHHTSCCTTSSTTTSHHHHHHHHHHHHH CS
  Thymidylate_kin 130 valkRlakrdeldeeeeeqldflrkvre 157
                       +l+R +k++  de++++++++l k++ 
       KHJ32745.1 290 PELERRKKQRN-DEKMAKREQDLAKLMN 316
                      56777777777.8899999999988776 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00046      0.32       4      41 ..      14      51 ..      12     158 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00046
      AAA_14  4 ilvitGaRrvGKTtllkqlikellvkkesilyinldde 41
                ++v +G+  +GKTt+++++  +l +kke    inld  
  KHJ32745.1 14 AIVCVGMAGSGKTTFMQRINAHLHAKKEPPYLINLDPA 51
                67889***********9998777799999999999864 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00036      0.25       1      24 [.      15      38 ..      15     152 .. 0.73
   2 ?   -1.8   0.9         6   4.2e+03     104     124 ..     290     310 ..     282     316 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00036
      AAA_18  1 IlltGtpGvGKttlakeLskrlgf 24
                I+  G++G+GKtt+ ++++ +l+ 
  KHJ32745.1 15 IVCVGMAGSGKTTFMQRINAHLHA 38
                5668**************888733 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 6
      AAA_18 104 eelleRlekRgyeeakikene 124
                  el +R ++R+ e+  ++e +
  KHJ32745.1 290 PELERRKKQRNDEKMAKREQD 310
                 577788888887777665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1090  (0.0607954); expected 358.6 (0.02)
Passed bias filter:                      704  (0.039266); expected 358.6 (0.02)
Passed Vit filter:                       103  (0.00574488); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.40
# Mc/sec: 2435.53
//
Query:       KHJ32746.1  [L=440]
Description: putative ribonuclease h2 subunit b protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-30  105.5   0.4    5.3e-30  104.7   0.4    1.4  1  RNase_H2-Ydr279  Ydr279p protein family (RNase H2 complex com
    2.4e-17   63.0   0.0    5.7e-17   61.7   0.0    1.7  1  Ydr279_N         Ydr279p protein triple barrel domain


Domain annotation for each model (and alignments):
>> RNase_H2-Ydr279  Ydr279p protein family (RNase H2 complex component) wHTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.7   0.4   5.9e-34   5.3e-30       1     159 [.     132     345 ..     132     346 .. 0.90

  Alignments for each domain:
  == domain 1  score: 104.7 bits;  conditional E-value: 5.9e-34
  RNase_H2-Ydr279   1 Fllipillklkskses....krrFlsldDlldslaessedlsellklersdiprslleerlaaiCdtveegdetmYrlseekllefLlsKverl 90 
                      Fl++p l++  + + s    k+++ls+dD+ld+l ++s++   l ++   +i r+l+ +r+ a+Cd+v+ +de+mYrl+e  l ++L++K+ r+
       KHJ32746.1 132 FLILPSLVPPINTK-SsahqKSLYLSFDDYLDRLITDSPRFVYLTNMI--PIRRKLF-QRMIAVCDSVDVDDEKMYRLNEGELAKELIRKALRM 221
                      89999999864443.35899****************999999999554..4555555.59********************************** PP

  RNase_H2-Ydr279  91 adeaglpesleekfvrkaleapllsvkre........................................................edastseed 128
                        e glp+s eekf++kale+p ++++ e                                                        +d+  ++  
       KHJ32746.1 222 T-EGGLPPSIEEKFIKKALEVPATKETFEnncksdsplveekkegenlsvkgdqlkkidplpsmirsvddepttnmtlinsellsDDHLAQKLI 314
                      9.888*****************9888888*******************************************************5555555566 PP

  RNase_H2-Ydr279 129 apeeilkllrlryAidllcssYlppslsekL 159
                      +++e+ +llrl++++ +++s+Y+ p++ e L
       KHJ32746.1 315 YKDEVSDLLRLKTCLLFIISNYITPHMGEFL 345
                      7799**********************98766 PP

>> Ydr279_N  Ydr279p protein triple barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.7   0.0   6.3e-21   5.7e-17       1      79 []      39     129 ..      39     129 .. 0.97

  Alignments for each domain:
  == domain 1  score: 61.7 bits;  conditional E-value: 6.3e-21
    Ydr279_N   1 iLPkdasssearivtLphPrtgsksryllcpestgqlyEltkisapkstprSwliepetd...............rtkgyVlkdakllvatpiD 79 
                 +LPkd  s++ari++L+hPr    + yl+cp  +g +yEl +i+ ++st rS+++ p+++               +++gy++++a+l+vat iD
  KHJ32746.1  39 LLPKDL-SKDARIISLKHPRGCNDTYYLVCPI-KG-VYELRTITESESTRRSLFLYPNHKgetrgnetdelkthpNHNGYIMRNASLFVATLID 129
                 69****.99**********************6.99.*********************999*******************************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.19s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 3739.32
//
Query:       KHJ32747.1  [L=439]
Description: hypothetical protein EV44_g4396 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       599  (0.0334096); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 3484.06
//
Query:       KHJ32748.1  [L=765]
Description: putative subunit of the n-terminal acetyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.1e-197  658.1  23.2   1.3e-195  651.2  17.9    2.2  2  NARP1          NMDA receptor-regulated protein 1
    6.1e-14   50.9  23.7      0.001   19.0   0.1    9.8  9  TPR_2          Tetratricopeptide repeat
    8.6e-13   47.5  12.5    7.1e-05   22.5   0.2    7.5  7  TPR_1          Tetratricopeptide repeat
    1.3e-12   48.1   5.9     0.0098   16.5   0.1    7.0  7  TPR_16         Tetratricopeptide repeat
    5.9e-12   45.9  14.5    0.00042   20.8   0.1    6.7  6  TPR_19         Tetratricopeptide repeat
    1.3e-11   44.5   1.1    0.00052   20.1   0.0    4.7  5  TPR_9          Tetratricopeptide repeat
      3e-11   42.6  20.7     0.0011   19.0   0.1    7.8  7  TPR_8          Tetratricopeptide repeat
    9.2e-11   41.8  18.9    0.00077   19.6   1.1    5.8  6  ANAPC3         Anaphase-promoting complex, cyclosome, subunit
    2.7e-10   40.2  11.7     0.0063   17.2   0.1    9.2  9  TPR_14         Tetratricopeptide repeat
    3.4e-10   39.6   5.7     0.0046   17.2   0.0    6.7  6  TPR_17         Tetratricopeptide repeat
    5.3e-07   29.2   8.2    0.00071   19.2   0.1    5.3  5  TPR_11         TPR repeat
    2.2e-06   27.3   1.7       0.45    9.8   0.1    3.8  4  TPR_MalT       MalT-like TPR region
    6.8e-06   25.5   8.2      0.019   14.2   0.2    3.8  3  TPR_15         Tetratricopeptide repeat
    5.8e-05   23.3  14.3        2.5    8.4   0.1    7.3  8  TPR_12         Tetratricopeptide repeat
    0.00084   19.7   0.1       0.69   10.7   0.1    4.3  3  TPR_4          Tetratricopeptide repeat
     0.0075   16.3   6.1        5.5    7.1   0.3    4.7  4  Fis1_TPR_C     Fis1 C-terminal tetratricopeptide repeat
     0.0097   15.9  10.3         41    4.5   0.0    7.0  6  TPR_7          Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.012   15.3   5.9        1.3    8.7   0.3    3.3  3  RPN7           26S proteasome subunit RPN7
      0.016   15.3   2.3       0.21   11.6   0.6    3.1  3  HTH_Tnp_IS630  Transposase
      0.037   13.9   0.8       0.19   11.7   0.0    2.6  3  Wzy_C_2        Virulence factor membrane-bound polymerase, C-
      0.056   13.5   0.8        1.6    8.8   0.2    3.0  2  TPR_3          Tetratricopeptide repeat
      0.086   13.2   1.5        1.6    9.1   0.1    3.0  2  Prok-TraM      Prokaryotic Transcriptional repressor TraM
       0.12   13.1   0.2       0.93   10.3   0.1    2.8  1  Sel1           Sel1 repeat
       0.21   11.5   6.9        5.1    7.0   0.8    4.0  3  YfdX           YfdX protein
        0.5   10.4   2.3       0.55   10.3   0.3    2.1  2  DUF1451        Zinc-ribbon containing domain
          6    7.7  21.0         13    6.7   0.1    8.5  8  TPR_6          Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> NARP1  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.2   0.00048      0.33     206     258 ..      23      75 ..      13      77 .. 0.91
   2 !  651.2  17.9  1.9e-198  1.3e-195       1     514 [.     184     689 ..     184     690 .. 0.96

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00048
                 T-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHCTTT CS
       NARP1 206 gsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaevmeearklDla 258
                 ++++k l++ d+ +++tp+  +   +Ka i+  +G   +A ++++ a + D +
  KHJ32748.1  23 KQYKKGLKTADQILRKTPKHGDTLAMKALIMNSQGKTADAFALAKVALQCDMK 75 
                 5788**************************************99999888865 PP

  == domain 2  score: 651.2 bits;  conditional E-value: 1.9e-198
                 HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGG---HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT-CHHHHHHHHHT..SSS-HHHHHHHHHHT CS
       NARP1   1 leesellLyknqiieeagkleeAlehLeekekqivDklavketkaelllkLgrkeeAeatyeaLlernpenskYyeglekakklskedeeallalydel 99 
                 +e+se++Lykn++i+e+g+ ++Al+hL+++ k+++D+lav+e +a++l+kLg k++A +ty+ Ll+rn+e ++Yy++l+k+ +++ ++++al+a+yde+
  KHJ32748.1 184 IEHSEAILYKNTLIAEQGEFQRALDHLNTAGKSCLDRLAVLELRANYLTKLGLKQDAIKTYRILLDRNSEYKTYYDSLIKVMEIEPSNHTALKAIYDEY 282
                 59************************************************************************************************* PP

                 TTS-TT-SHHHHTHHHH--HHHHHHHHHHHHHHHHHCT-TTHHHHHGGGGGGSCHHHHHHHHHHHHHTTTTTSSSSTTGG.GSS----SSHHHHHHHHH CS
       NARP1 100 aekyprsdaprRlpLdfleGeeFkelvdkYlrkaLrkgvPslfanlksLYedkeKvkileelvegyvkslktsgklsesdnedsekepesallwvlyfl 198
                 aekypr+da+rRlpLdfleG++F+e++dkYl+++L kgvPs+fanlk+LY+++eK++il el+++y ++ +++ + ++++      ++ +++  + yfl
  KHJ32748.1 283 AEKYPRCDAARRLPLDFLEGDDFREAADKYLNRMLDKGVPSTFANLKQLYSNTEKRDILAELALKYLTKYESQVNSQSDS----DGNILKCVTAACYFL 377
                 ********************************************************************999887776554....56778888889**** PP

                 HHHHHHHT-SH..HHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHCTTT-HHHHHHHHHHHHHTT-HHHHHHHHTTTS-TTS..HH CS
       NARP1 199 Aqhydklgsre..kAleyidkaiehtptlvelyltKarilkhaGdlkkAaevmeearklDlaDRyiNskcakymLradeveeAeetvslFtreev..da 293
                 Aqh++++ +r+  kA++yi+kaie + ++v++y+tKari+kh Gd+ kA evme+ar lD++DR+iN+k+aky+Lr++e e+A ++++lFtr ++  ++
  KHJ32748.1 378 AQHFNYHLNRDleKAMKYIEKAIELDSQSVNFYMTKARIYKHLGDVAKASEVMEHARTLDERDRHINTKAAKYQLRNNESEKAIKIMGLFTRADTvgGP 476
                 ******9988777*********************************************************************************999** PP

                 HHHHHHTT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHCTTTHHHHHHHHT-HHHHHHHHHHHCTTT-SHHHHHHHHHHHHHHHHHHH-TTG CS
       NARP1 294 ledlnemqcmWfetedgeaylrqkklglALKrfhavekhFdeieeDqFDFHtyclRkmtlraYvdllrledelrshpfyvkaakgaievYlkledkpka 392
                 l+dl++mqcmW+++edge+y+rq+k+glALKrf++++++Fd+++eDqFDFH+++lRk+++r+Y+d++r+ed+lr+hpfy +aa +a+++Y++l+d+p+a
  KHJ32748.1 477 LADLHDMQCMWYLIEDGESYARQGKIGLALKRFTSIYNIFDVWHEDQFDFHSFSLRKGQIRSYIDMIRWEDKLREHPFYSRAALSAVKIYIDLYDRPLA 575
                 **************************************************************************************************9 PP

                 GG---HHHHHT-S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--.......-------------S-SSSTTTT-S-HHHHHHHHHTTTGGGTTT-THH CS
       NARP1 393 keeekeeaksaelseaerkklrkkakkaekkaekeeaekaekekekkaaekkakkedeeakkededplgekLvkteepLeeAlkflkpLlklaaeniet 491
                 ++ + +   ++  +++e+kk++kka k++ kae+e+a+k+++       +k +  + e++kk d+dp+g+kL++t+epL++A+kfl pLl+l +++i++
  KHJ32748.1 576 SRVNGN--IENGHDPTEKKKAAKKAMKEHLKAEREAAAKKSAP------NKPTGVRSEDSKKIDDDPNGTKLAATTEPLNDAMKFLCPLLQLRQKSIDV 666
                 887766..455689*********************99955433......3455667788999************************************* PP

                 HHHHHHHHHHTT-HHHHHHHHHH CS
       NARP1 492 hllafevyiRkkklllalkalkk 514
                 + ++fe+yiRkkk+ lal++l k
  KHJ32748.1 667 QAAGFEIYIRKKKYFLALRCLLK 689
                 ********************976 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1       3.4   2.4e+03      12      34 .]      20      42 ..      19      42 .. 0.88
   2 !   19.0   0.1   1.5e-06     0.001       3      33 ..      79     109 ..      77     110 .. 0.94
   3 ?    4.6   0.0      0.06        41       4      23 ..     148     167 ..     147     169 .. 0.90
   4 ?    3.1   0.0      0.19   1.3e+02      13      27 ..     199     213 ..     198     216 .. 0.90
   5 ?    4.0   0.2     0.097        67       4      31 ..     224     251 ..     222     254 .. 0.86
   6 !   12.4   0.1    0.0002      0.14      11      32 ..     383     404 ..     381     406 .. 0.89
   7 !   11.4   0.0   0.00042      0.29       3      33 ..     409     439 ..     407     440 .. 0.91
   8 ?   -0.1   0.0       1.9   1.3e+03       8      24 ..     493     509 ..     493     512 .. 0.87
   9 ?    4.0   0.3     0.097        67      10      34 .]     673     697 ..     672     697 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 3.4
       TPR_2 12 yklgdyeeAleafekAleldPnn 34
                y+ ++y++ l+  ++ l+  P++
  KHJ32748.1 20 YEDKQYKKGLKTADQILRKTPKH 42
                67799************999986 PP

  == domain 2  score: 19.0 bits;  conditional E-value: 1.5e-06
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPn 33 
                 +++  Gl+y+ ++++eeA++a++ Al+l+P+
  KHJ32748.1  79 CWHVYGLLYRTAKNFEEAIKAYKFALKLEPE 109
                 69999************************97 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.06
       TPR_2   4 lynlGlayyklgdyeeAlea 23 
                 + +l+ a+  +gd++eA++ 
  KHJ32748.1 148 WTALAVAHHLNGDPNEAERV 167
                 789**************976 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.19
       TPR_2  13 klgdyeeAleafekA 27 
                 ++g++++Al++++ A
  KHJ32748.1 199 EQGEFQRALDHLNTA 213
                 79*********9987 PP

  == domain 5  score: 4.0 bits;  conditional E-value: 0.097
       TPR_2   4 lynlGlayyklgdyeeAleafekAleld 31 
                 l  +++ + klg  ++A++ ++  l  +
  KHJ32748.1 224 LELRANYLTKLGLKQDAIKTYRILLDRN 251
                 6789*****************9888766 PP

  == domain 6  score: 12.4 bits;  conditional E-value: 0.0002
       TPR_2  11 yyklgdyeeAleafekAleldP 32 
                 y  + d+e+A ++ ekA+eld 
  KHJ32748.1 383 YHLNRDLEKAMKYIEKAIELDS 404
                 78899***************96 PP

  == domain 7  score: 11.4 bits;  conditional E-value: 0.00042
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPn 33 
                  ++  +++y +lgd ++A e +e A  ld++
  KHJ32748.1 409 FYMTKARIYKHLGDVAKASEVMEHARTLDER 439
                 68899********************999976 PP

  == domain 8  score: -0.1 bits;  conditional E-value: 1.9
       TPR_2   8 GlayyklgdyeeAleaf 24 
                 G++y+++g+   Al+ f
  KHJ32748.1 493 GESYARQGKIGLALKRF 509
                 889******99999865 PP

  == domain 9  score: 4.0 bits;  conditional E-value: 0.097
       TPR_2  10 ayyklgdyeeAleafekAleldPnn 34 
                 +y+++++y  Al+++ k + ld+++
  KHJ32748.1 673 IYIRKKKYFLALRCLLKEINLDEDH 697
                 89***************99999886 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.2     1e-07   7.1e-05       8      33 ..      84     109 ..      84     110 .. 0.96
   2 ?    4.1   0.0     0.065        45       4      21 ..     148     165 ..     148     168 .. 0.92
   3 ?    2.8   0.0      0.17   1.2e+02      13      27 ..     199     213 ..     198     213 .. 0.89
   4 ?    3.2   0.1      0.13        89       7      25 ..     227     245 ..     223     254 .. 0.85
   5 !   13.9   0.2   5.1e-05     0.035      11      32 ..     383     404 ..     383     406 .. 0.92
   6 ?    1.8   0.0      0.34   2.4e+02       3      21 ..     409     427 ..     407     438 .. 0.87
   7 ?   -1.7   0.1       4.5   3.1e+03       8      22 ..     493     507 ..     491     507 .. 0.87

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 1e-07
                 HHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   8 GnayfklgkydeAleyyekALelnPn 33 
                 G++y+  ++++eA+++y+ AL+l+P+
  KHJ32748.1  84 GLLYRTAKNFEEAIKAYKFALKLEPE 109
                 899**********************7 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.065
                 HHHHHHHHHHTT-HHHHH CS
       TPR_1   4 lynlGnayfklgkydeAl 21 
                 +  l++a++ +g+++eA+
  KHJ32748.1 148 WTALAVAHHLNGDPNEAE 165
                 788**************7 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.17
                 HTT-HHHHHHHHHHH CS
       TPR_1  13 klgkydeAleyyekA 27 
                 ++g+++ Al++ + A
  KHJ32748.1 199 EQGEFQRALDHLNTA 213
                 69*********9877 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.13
                 HHHHHHHTT-HHHHHHHHH CS
       TPR_1   7 lGnayfklgkydeAleyye 25 
                 ++n + klg  ++A++ y+
  KHJ32748.1 227 RANYLTKLGLKQDAIKTYR 245
                 8999************998 PP

  == domain 5  score: 13.9 bits;  conditional E-value: 5.1e-05
                 HHHTT-HHHHHHHHHHHHHHST CS
       TPR_1  11 yfklgkydeAleyyekALelnP 32 
                 y+ + ++++A +y ekA+el+ 
  KHJ32748.1 383 YHLNRDLEKAMKYIEKAIELDS 404
                 88899***************97 PP

  == domain 6  score: 1.8 bits;  conditional E-value: 0.34
                 HHHHHHHHHHHTT-HHHHH CS
       TPR_1   3 alynlGnayfklgkydeAl 21 
                  +  ++ +y +lg+  +A 
  KHJ32748.1 409 FYMTKARIYKHLGDVAKAS 427
                 5788999*******99995 PP

  == domain 7  score: -1.7 bits;  conditional E-value: 4.5
                 HHHHHHTT-HHHHHH CS
       TPR_1   8 GnayfklgkydeAle 22 
                 G  y ++gk   Al+
  KHJ32748.1 493 GESYARQGKIGLALK 507
                 789******999986 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0096       6.6       9      66 ..      21      75 ..      19      77 .. 0.92
   2 !   16.5   0.1   1.4e-05    0.0098       4      45 ..      84     122 ..      84     129 .. 0.87
   3 ?   -0.6   0.0       3.2   2.2e+03      39      59 ..     150     170 ..     148     174 .. 0.71
   4 !    8.5   0.1    0.0046       3.2       9      63 ..     199     250 ..     197     255 .. 0.91
   5 ?   -1.1   0.3       4.6   3.1e+03      21      61 ..     280     317 ..     273     322 .. 0.51
   6 !   10.1   0.0    0.0015         1      10      53 ..     386     426 ..     386     437 .. 0.94
   7 ?   -0.7   0.0       3.4   2.4e+03       4      21 ..     493     510 ..     492     513 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0096
      TPR_16  9 ragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapd 66
                + ++y + ++ +++ l++    P + + l  ++++   qg  a+A al + al+++++
  KHJ32748.1 21 EDKQYKKGLKTADQILRKT---PKHGDTLAMKALIMNSQGKTADAFALAKVALQCDMK 75
                66889999***********...******************************998865 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 1.4e-05
      TPR_16   4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaal 45 
                 +++++ a+++++A++a++ alk+    P+  + +  l+++  
  KHJ32748.1  84 GLLYRTAKNFEEAIKAYKFALKLE---PESQQIQRDLALLQI 122
                 678999******************...999999999998765 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 3.2
      TPR_16  39 llgdaalrqgrlaeAaalyra 59 
                 +l++a+  +g+  eA+ ++ +
  KHJ32748.1 150 ALAVAHHLNGDPNEAERVLTS 170
                 678888888888888766655 PP

  == domain 4  score: 8.5 bits;  conditional E-value: 0.0046
      TPR_16   9 ragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalra 63 
                 ++g++++A+  l++a k+     d+ + l l+++ + ++g  ++A+  yr +l+ 
  KHJ32748.1 199 EQGEFQRALDHLNTAGKSC---LDRLAVLELRANYLTKLGLKQDAIKTYRILLDR 250
                 799**************99...************************999998864 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 4.6
      TPR_16  21 eaalkrdpssPdaaeAllllgdaalrqgrlaeAa.alyraal 61 
                 +++ +++   P++ +A+ l  d + +  ++ eAa  +++++l
  KHJ32748.1 280 DEYAEKY---PRCDAARRLPLDFL-EGDDFREAAdKYLNRML 317
                 5555555...55555554433333.23355555555555555 PP

  == domain 6  score: 10.1 bits;  conditional E-value: 0.0015
      TPR_16  10 agdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeA 53 
                 ++d ++A ++ e a+++d   ++ + +++ +++++ ++g++a+A
  KHJ32748.1 386 NRDLEKAMKYIEKAIELD---SQSVNFYMTKARIYKHLGDVAKA 426
                 5899**************...*********************99 PP

  == domain 7  score: -0.7 bits;  conditional E-value: 3.4
      TPR_16   4 araalragdyddAaaale 21 
                 + +++r+g+   A+++++
  KHJ32748.1 493 GESYARQGKIGLALKRFT 510
                 567889999999998885 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.1      0.29     2e+02       3      47 ..      21      65 ..      19      77 .. 0.80
   2 !   16.8   0.5     1e-05     0.007       4      42 ..      90     128 ..      88     129 .. 0.94
   3 ?    3.2   0.0      0.19   1.3e+02      29      51 ..     149     171 ..     136     176 .. 0.84
   4 ?    5.9   0.4     0.027        18       3      64 ..     199     261 ..     198     263 .. 0.84
   5 !   20.8   0.1   6.2e-07   0.00042       4      61 ..     386     443 ..     384     450 .. 0.88
   6 ?   -0.7   0.0       3.2   2.2e+03       9      62 ..     648     701 ..     646     704 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.29
      TPR_19  3 aegdyaeAlalleqalqedpknaearllLAeallalgqldeAeal 47
                ++++y   l+   q+l + pk+++ ++  A ++ ++g +++A al
  KHJ32748.1 21 EDKQYKKGLKTADQILRKTPKHGDTLAMKALIMNSQGKTADAFAL 65
                678889999999999999999999999888888888888888555 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 1e-05
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqld 42 
                 +++++eA+++++ al+ +p+++ ++ +LA +++++ +++
  KHJ32748.1  90 AKNFEEAIKAYKFALKLEPESQQIQRDLALLQIQMRDYQ 128
                 5799*******************************9985 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.19
      TPR_19  29 llLAeallalgqldeAealLdal 51 
                  +LA a+  +g+++eAe++L  +
  KHJ32748.1 149 TALAVAHHLNGDPNEAERVLTSY 171
                 5799***************9876 PP

  == domain 4  score: 5.9 bits;  conditional E-value: 0.027
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpdd.aryasL 64 
                 ++g +++Al++l  a +   + ++++ l A+ l +lg  ++A+++   l++ +     +y sL
  KHJ32748.1 199 EQGEFQRALDHLNTAGKSCLDRLAVLELRANYLTKLGLKQDAIKTYRILLDRNSEYkTYYDSL 261
                 89************987777788888888***************9988888887765666665 PP

  == domain 5  score: 20.8 bits;  conditional E-value: 6.2e-07
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddary 61 
                 + d++ A+++ e+a++ d ++ +  +  A+++  lg++++A ++++ +   d  d  +
  KHJ32748.1 386 NRDLEKAMKYIEKAIELDSQSVNFYMTKARIYKHLGDVAKASEVMEHARTLDERDRHI 443
                 5799*****************************************9988777766555 PP

  == domain 6  score: -0.7 bits;  conditional E-value: 3.2
      TPR_19   9 eAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddarya 62 
                 +A+++l  +lq   k+ +++++  e+++  + +  A ++L +  + d d+++++
  KHJ32748.1 648 DAMKFLCPLLQLRQKSIDVQAAGFEIYIRKKKYFLALRCLLKEINLDEDHPNVH 701
                 788888888888888888888889999999999999999988888888888887 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       6.6   4.5e+03       9      43 ..      23      57 ..      21      64 .. 0.70
   2 !   16.6   0.0   9.1e-06    0.0063       4      47 ..      86     129 ..      84     131 .. 0.95
   3 ?    1.7   0.1      0.43     3e+02      40      69 ..     198     227 ..     194     229 .. 0.82
   4 !   20.1   0.0   7.5e-07   0.00052       7      63 ..     385     441 ..     381     453 .. 0.89
   5 ?   -1.0   0.0       2.9     2e+03       3      29 ..     672     698 ..     671     701 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 6.6
       TPR_9  9 edweralavverllllaPddpeerrdRGlllaqlG 43
                +++ + l++++ +l   P++ + +   +l+   +G
  KHJ32748.1 23 KQYKKGLKTADQILRKTPKHGDTLAMKALIMNSQG 57
                57888899999999888887666666666655555 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 9.1e-06
       TPR_9   4 iaireedweralavverllllaPddpeerrdRGlllaqlGclsa 47 
                 ++  ++++e+a++++   l l P++ +  rd +ll+ q+ ++++
  KHJ32748.1  86 LYRTAKNFEEAIKAYKFALKLEPESQQIQRDLALLQIQMRDYQG 129
                 68899************************************996 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.43
       TPR_9  40 aqlGclsaAladLeaylalapdapdaeair 69 
                 a++G ++ Al+ L+++   + d+ ++  +r
  KHJ32748.1 198 AEQGEFQRALDHLNTAGKSCLDRLAVLELR 227
                 899***********9988888877777666 PP

  == domain 4  score: 20.1 bits;  conditional E-value: 7.5e-07
       TPR_9   7 reedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdap 63 
                  ++d e+a++++e  + l+++++  ++  ++++ +lG++++A + +e++  l++ ++
  KHJ32748.1 385 LNRDLEKAMKYIEKAIELDSQSVNFYMTKARIYKHLGDVAKASEVMEHARTLDERDR 441
                 579********************************************9988887655 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 2.9
       TPR_9   3 aiaireedweralavverllllaPddp 29 
                 +i+ir++++  al+++   + l+ d+p
  KHJ32748.1 672 EIYIRKKKYFLALRCLLKEINLDEDHP 698
                 69*************987777777776 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.1   1.7e-06    0.0011       4      33 ..      80     109 ..      78     110 .. 0.95
   2 ?    1.1   0.0       0.9   6.2e+02       4      23 ..     148     167 ..     147     170 .. 0.89
   3 ?    1.2   0.1       0.8   5.5e+02       6      25 ..     226     245 ..     222     254 .. 0.82
   4 !   15.2   0.2   2.6e-05     0.018      11      33 ..     383     405 ..     373     406 .. 0.88
   5 !   13.8   0.0   7.4e-05     0.051       3      32 ..     409     438 ..     407     440 .. 0.89
   6 ?   -1.7   0.4       6.8   4.7e+03      15      30 ..     590     605 ..     587     608 .. 0.77
   7 ?   -1.1   0.1       4.3     3e+03      10      34 .]     673     697 ..     669     697 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.7e-06
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ++  g++y++ +++eeA+++y+ al+l+p+
  KHJ32748.1  80 WHVYGLLYRTAKNFEEAIKAYKFALKLEPE 109
                 999*************************97 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.9
                 HHHHHHHHHHTT-HHHHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAkey 23 
                 +  l+ +++  gd +eA+ +
  KHJ32748.1 148 WTALAVAHHLNGDPNEAERV 167
                 889**************865 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.8
                 HHHHHHHHTT-HHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyye 25 
                 + ++ + klg ++ A+++y+
  KHJ32748.1 226 LRANYLTKLGLKQDAIKTYR 245
                 6788899************8 PP

  == domain 4  score: 15.2 bits;  conditional E-value: 2.6e-05
                 HHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  11 ylklgdyeeAkeyyekaleldpd 33 
                 y+   d+e+A++y+eka+eld +
  KHJ32748.1 383 YHLNRDLEKAMKYIEKAIELDSQ 405
                 677789**************975 PP

  == domain 5  score: 13.8 bits;  conditional E-value: 7.4e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldp 32 
                  y+ +++iy+ lgd  +A e++e+a +ld+
  KHJ32748.1 409 FYMTKARIYKHLGDVAKASEVMEHARTLDE 438
                 799********************9977765 PP

  == domain 6  score: -1.7 bits;  conditional E-value: 6.8
                 T-HHHHHHHHHHHHHH CS
       TPR_8  15 gdyeeAkeyyekalel 30 
                 +++++Ak+++++ l++
  KHJ32748.1 590 EKKKAAKKAMKEHLKA 605
                 6789999999986665 PP

  == domain 7  score: -1.1 bits;  conditional E-value: 4.3
                 HHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8  10 iylklgdyeeAkeyyekaleldpdn 34 
                 iy+ +++y  A  ++ k + ld+d+
  KHJ32748.1 673 IYIRKKKYFLALRCLLKEINLDEDH 697
                 899****999999999988888875 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   1.1   1.1e-06   0.00077       2      80 ..      22     101 ..      21     103 .. 0.91
   2 ?    2.3   0.0      0.28   1.9e+02      27      49 ..     149     171 ..     135     181 .. 0.82
   3 !   14.1   0.5   6.1e-05     0.042      19      79 ..     183     244 ..     174     245 .. 0.91
   4 !   11.0   1.2   0.00057      0.39      33      81 ..     383     432 ..     340     433 .. 0.79
   5 !   13.2   0.3   0.00011     0.076       3      77 ..     387     462 ..     385     466 .. 0.79
   6 ?   -0.1   0.0       1.6   1.1e+03      31      58 ..     672     700 ..     644     706 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 1.1e-06
                 TT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3   2 qnnyknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                  ++yk+ +  a+ +l + +++ + + ++Al + ++g+   A+ l++ a + + ks+ c+ +++  +   k++eeAi+a++
  KHJ32748.1  22 DKQYKKGLKTADQILRKTPKHGDTLAMKALIMNSQGKTADAFALAKVAlQCDMKSHVCWHVYGLLYRTAKNFEEAIKAYK 101
                 5799999********6666666667778************************************************9976 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.28
                 HHHHHHHHHTT-HHHHHHHHHCT CS
      ANAPC3  27 yllAlclylngqykrAyellrka 49 
                  +lA ++ lng+ ++A ++l ++
  KHJ32748.1 149 TALAVAHHLNGDPNEAERVLTSY 171
                 579****************9988 PP

  == domain 3  score: 14.1 bits;  conditional E-value: 6.1e-05
                 HH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH CS
      ANAPC3  19 etespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaL 79 
                 + e++e+++++     ++g+++rA++ l++a k+    l+++ l A  l kL+  ++Ai+++
  KHJ32748.1 183 DIEHSEAILYKNTLIAEQGEFQRALDHLNTAgKSCLDRLAVLELRANYLTKLGLKQDAIKTY 244
                 5678899999999999***************99999999********************975 PP

  == domain 4  score: 11.0 bits;  conditional E-value: 0.00057
                 HHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  33 lylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLek 81 
                 + ln + ++A+++++ka +l+s+s +  +++A+ +  L+ + +A  ++e+
  KHJ32748.1 383 YHLNRDLEKAMKYIEKAiELDSQSVNFYMTKARIYKHLGDVAKASEVMEH 432
                 55677788899999999999999999999999988888888888777765 PP

  == domain 5  score: 13.2 bits;  conditional E-value: 0.00011
                 T-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHH CS
      ANAPC3   3 nnyknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAia 77 
                 +++++A+ ++e++ + +++s +  + +A  + ++g+  +A e+ + a  l++++  +   +A+ +l  ++ e+Ai+
  KHJ32748.1 387 RDLEKAMKYIEKAIELDSQSVNFYMTKARIYKHLGDVAKASEVMEHArTLDERDRHINTKAAKYQLRNNESEKAIK 462
                 6789999999999999999999999999999999999999999999977777666666666666666677676666 PP

  == domain 6  score: -0.1 bits;  conditional E-value: 1.6
                 HHHHHTT-HHHHHHHHHCT.SHHHC-HHH CS
      ANAPC3  31 lclylngqykrAyellrka.klnskslgc 58 
                 + + + ++y  A++ l k  +l++ ++++
  KHJ32748.1 672 EIYIRKKKYFLALRCLLKEiNLDEDHPNV 700
                 56889999999999999999999999876 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0       1.2   8.5e+02      15      42 ..      23      50 ..      19      52 .. 0.85
   2 ?    3.7   0.0      0.21   1.4e+02       4      42 ..      46      84 ..      43      86 .. 0.87
   3 !   17.2   0.1   9.2e-06    0.0063       4      43 ..      80     119 ..      77     120 .. 0.93
   4 ?    4.2   0.0      0.14        95       4      27 ..     148     171 ..     146     176 .. 0.88
   5 ?    1.5   0.1       1.1   7.3e+02      13      37 ..     199     223 ..     191     228 .. 0.76
   6 ?    3.0   0.0      0.33   2.3e+02       6      32 ..     226     252 ..     221     264 .. 0.83
   7 ?   -0.3   0.0       3.9   2.7e+03      16      39 ..     271     294 ..     256     295 .. 0.77
   8 ?    5.6   0.0     0.049        34      13      40 ..     385     412 ..     372     416 .. 0.74
   9 ?    4.7   0.0     0.095        66       4      39 ..     410     445 ..     407     450 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 1.2
      TPR_14 15 GdpdeAiallrralalaPddaeawllla 42
                 ++++ ++ ++++l++ P++ +++ + a
  KHJ32748.1 23 KQYKKGLKTADQILRKTPKHGDTLAMKA 50
                689999************9988887776 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.21
      TPR_14  4 llalaeallalGdpdeAiallrralalaPddaeawllla 42
                l++ a ++  +G++++A al++ al+ + ++ + w  ++
  KHJ32748.1 46 LAMKALIMNSQGKTADAFALAKVALQCDMKSHVCWHVYG 84
                5677889999****************9999999998887 PP

  == domain 3  score: 17.2 bits;  conditional E-value: 9.2e-06
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 +  ++ +++++ +++eAi++++ al+l P+++++++ la 
  KHJ32748.1  80 WHVYGLLYRTAKNFEEAIKAYKFALKLEPESQQIQRDLAL 119
                 778999*****************************99985 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.14
      TPR_14   4 llalaeallalGdpdeAiallrra 27 
                 + ala a+  +Gdp eA+++l  +
  KHJ32748.1 148 WTALAVAHHLNGDPNEAERVLTSY 171
                 7899****************9765 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 1.1
      TPR_14  13 alGdpdeAiallrralalaPddaea 37 
                 ++G++++A+++l+ a + + d +++
  KHJ32748.1 199 EQGEFQRALDHLNTAGKSCLDRLAV 223
                 79**********9986666665555 PP

  == domain 6  score: 3.0 bits;  conditional E-value: 0.33
      TPR_14   6 alaeallalGdpdeAiallrralalaP 32 
                 ++a +l  lG  ++Ai+ +r +l+++ 
  KHJ32748.1 226 LRANYLTKLGLKQDAIKTYRILLDRNS 252
                 6799*****************999875 PP

  == domain 7  score: -0.3 bits;  conditional E-value: 3.9
      TPR_14  16 dpdeAiallrralalaPddaeawl 39 
                 ++ +  a+++++ +++P  ++a++
  KHJ32748.1 271 NHTALKAIYDEYAEKYPRCDAARR 294
                 56666779999******9999986 PP

  == domain 8  score: 5.6 bits;  conditional E-value: 0.049
      TPR_14  13 alGdpdeAiallrralalaPddaeawll 40 
                  ++d+++A+++ ++a++l+ ++  +++ 
  KHJ32748.1 385 LNRDLEKAMKYIEKAIELDSQSVNFYMT 412
                 4689*************98777666655 PP

  == domain 9  score: 4.7 bits;  conditional E-value: 0.095
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawl 39 
                 ++  a+++ +lGd ++A ++ + a  l+  d+ +++
  KHJ32748.1 410 YMTKARIYKHLGDVAKASEVMEHARTLDERDRHINT 445
                 67789***************9999888887776655 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0     0.055        38       4      32 ..      34      62 ..      31      64 .. 0.91
   2 !    9.4   0.0    0.0021       1.5       4      34 .]      68      98 ..      65      98 .. 0.92
   3 ?    4.2   0.0     0.097        67      15      33 ..     147     165 ..     146     166 .. 0.91
   4 ?   -2.1   0.0       9.9   6.8e+03      15      33 ..     189     207 ..     185     208 .. 0.70
   5 !   17.2   0.0   6.7e-06    0.0046       2      32 ..     396     426 ..     395     428 .. 0.94
   6 ?   -2.0   0.1         9   6.2e+03      20      34 .]     448     462 ..     445     462 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.055
      TPR_17  4 kaleldPnnadaynnLAelllknGdlmtA 32
                + l++ P++ d + ++A ++ ++G++++A
  KHJ32748.1 34 QILRKTPKHGDTLAMKALIMNSQGKTADA 62
                67899*********************998 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0021
      TPR_17  4 kaleldPnnadaynnLAelllknGdlmtArq 34
                 al++d ++ + ++ ++ l++ ++++++A++
  KHJ32748.1 68 VALQCDMKSHVCWHVYGLLYRTAKNFEEAIK 98
                59**************************985 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.097
      TPR_17  15 aynnLAelllknGdlmtAr 33 
                  ++ LA++++ nGd+ +A+
  KHJ32748.1 147 NWTALAVAHHLNGDPNEAE 165
                 599**************97 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 9.9
      TPR_17  15 aynnLAelllknGdlmtAr 33 
                 a  ++ +l +++G++++A+
  KHJ32748.1 189 AILYKNTLIAEQGEFQRAL 207
                 5555556667999999996 PP

  == domain 5  score: 17.2 bits;  conditional E-value: 6.7e-06
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                  +ka+eld  ++++y  +A++++++Gd ++A
  KHJ32748.1 396 IEKAIELDSQSVNFYMTKARIYKHLGDVAKA 426
                 69*************************9887 PP

  == domain 6  score: -2.0 bits;  conditional E-value: 9
      TPR_17  20 AelllknGdlmtArq 34 
                 A+++l+n+++++A++
  KHJ32748.1 448 AKYQLRNNESEKAIK 462
                 6788999****9985 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.1     1e-06   0.00071       1      38 [.      84     121 ..      84     124 .. 0.90
   2 ?    0.4   0.0      0.76   5.2e+02       6      20 ..     199     213 ..     197     215 .. 0.92
   3 !    6.5   0.1    0.0094       6.5       9      39 ..     388     418 ..     383     421 .. 0.80
   4 ?   -2.1   0.1       4.6   3.2e+03       1      15 [.     493     507 ..     493     509 .. 0.79
   5 ?    3.4   0.0     0.091        63       3      31 ..     673     701 ..     672     704 .. 0.92

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 1e-06
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlay 38 
                 G +y+   ++eeAi+aYk Alkl P++  +   L+l++
  KHJ32748.1  84 GLLYRTAKNFEEAIKAYKFALKLEPESQQIQRDLALLQ 121
                 67899999*******************99999999876 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.76
      TPR_11   6 eqGkyeeAieaYkkA 20 
                 eqG++  A+ ++++A
  KHJ32748.1 199 EQGEFQRALDHLNTA 213
                 8***********998 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0094
      TPR_11   9 kyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 ++e+A++  +kA++ld++++++y   + +y 
  KHJ32748.1 388 DLEKAMKYIEKAIELDSQSVNFYMTKARIYK 418
                 5788888889************976666665 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 4.6
      TPR_11   1 GdayyeqGkyeeAie 15 
                 G  y  qGk+  A++
  KHJ32748.1 493 GESYARQGKIGLALK 507
                 678999999988887 PP

  == domain 5  score: 3.4 bits;  conditional E-value: 0.091
      TPR_11   3 ayyeqGkyeeAieaYkkAlkldPdnaeay 31 
                 +y  + ky  A+ ++ k ++ld+d ++++
  KHJ32748.1 673 IYIRKKKYFLALRCLLKEINLDEDHPNVH 701
                 7899999999*****************99 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.2    0.0047       3.2       1      76 [.      43     113 ..      43     132 .. 0.77
   2 !    6.7   0.0     0.006       4.2      45     106 ..     150     213 ..     136     226 .. 0.84
   3 !    9.8   0.1   0.00065      0.45     137     209 ..     388     452 ..     358     465 .. 0.82
   4 ?   -1.3   0.0       1.6   1.1e+03      79     130 ..     485     535 ..     477     537 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0047
    TPR_MalT   1 geiaalrAllaiasgdaeralelArqALallpeddllariaatavlGeasllqGdleaAlqalqeaeklarqadsl 76 
                 g + a++Al+  ++g++ +a +lA+ AL+   ++ + +      v+G  + ++ ++e+A +a++ a kl  + +++
  KHJ32748.1  43 GDTLAMKALIMNSQGKTADAFALAKVALQCDMKSHVCW-----HVYGLLYRTAKNFEEAIKAYKFALKLEPESQQI 113
                 67889***********************9988777555.....467888888999999998888777765555544 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.006
    TPR_MalT  45 vlGeasllqGdleaAlqalqeaeklarqadslhv..allallqqaeilvaqGrLheAletyeqa 106
                 +l+ a++l+Gd ++A+++l + e++++   s +      a+l+   +  +qG+++ Al++ + a
  KHJ32748.1 150 ALAVAHHLNGDPNEAERVLTSYEDTLKIPSSCTDieHSEAILYKNTLIAEQGEFQRALDHLNTA 213
                 4688*******************999888888774458999999999999********999876 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00065
    TPR_MalT 137 dLeeAeqhlqeGielleqlepeaaldayvllarialaqGdleeAetllekaeelaresnfhvdwlanaeevrv 209
                 dLe+A ++ +++iel  q      +  y++ ari+   Gd+ +A +++e a  l +++++    +++a ++++
  KHJ32748.1 388 DLEKAMKYIEKAIELDSQS-----VNFYMTKARIYKHLGDVAKASEVMEHARTLDERDRH---INTKAAKYQL 452
                 7888888888888776665.....9**************************999887776...3444455555 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 1.6
    TPR_MalT  79 allallqqaeilvaqGrLheAletyeqalqlateqglqqlplvgfllvllad 130
                  ++ l+  +e +  qG+   Al+ ++ +    +  ++ q+  + f l++ ++
  KHJ32748.1 485 CMWYLIEDGESYARQGKIGLALKRFTSIYNIFDVWHEDQFDFHSFSLRK-GQ 535
                 6999999******************999999999999999999988877.65 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.2   2.7e-05     0.019     144     194 ..      75     125 ..      23     174 .. 0.79
   2 !    8.1   0.4     0.002       1.4      10      97 ..     188     275 ..     182     288 .. 0.81
   3 !    5.8   0.1    0.0097       6.7     126     182 ..     386     443 ..     370     448 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.7e-05
      TPR_15 144 qsaafllaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlg 194
                 +s   + +++ lyr + + ++A+++y+ Al+l+p+s++++  l  l i + 
  KHJ32748.1  75 KSHVCWHVYGLLYRTAKNFEEAIKAYKFALKLEPESQQIQRDLALLQIQMR 125
                 88999**********************************999877766544 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.002
      TPR_15  10 ealkl.atllykqgdvkkAlevLkeaaqkaapskdteyWrtladLAwalqqedearkAyrqLlasgkaraedyerliel.lydaepkeaa 97 
                 ea+ +  tl+++qg++++Al  L ++a k    +  ++++++a+   +l  +++a+k yr Ll ++   +  y++li+    + +   a+
  KHJ32748.1 188 EAILYkNTLIAEQGEFQRALDHL-NTAGKS-CLDRLAVLELRANYLTKLGLKQDAIKTYRILLDRNSEYKTYYDSLIKVmEIEPSNHTAL 275
                 566555789999***********.678888.588889*******99**********************9999***999844555555555 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0097
      TPR_15 126 ydriaellksleeeeaae.qsaafllaraelyrqegqtdaAlrdyreAlalapdssel 182
                  + +++ +k++e+  ++  qs  f++  a++y+  g+ ++A ++++ A +l+  +  +
  KHJ32748.1 386 NRDLEKAMKYIEKAIELDsQSVNFYMTKARIYKHLGDVAKASEVMEHARTLDERDRHI 443
                 456788888888888887688899************************9999888765 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.62   4.2e+02      40      73 ..      38      71 ..      20      75 .. 0.73
   2 !    8.4   0.1    0.0037       2.5       9      31 ..      83     105 ..      78     128 .. 0.67
   3 ?    3.7   0.0      0.11        75      50      70 ..     150     170 ..     146     177 .. 0.80
   4 ?    0.7   0.0      0.97   6.7e+02      57      71 ..     199     213 ..     187     219 .. 0.74
   5 ?    2.4   0.5      0.28   1.9e+02      26      69 ..     203     245 ..     195     252 .. 0.71
   6 ?    0.0   0.1       1.6   1.1e+03       3      36 ..     221     254 ..     219     263 .. 0.77
   7 !    8.2   0.2    0.0043         3      13      59 ..     383     428 ..     372     439 .. 0.65
   8 ?    1.0   0.0      0.79   5.4e+02      10      33 ..     493     516 ..     485     523 .. 0.66

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.62
      TPR_12 40 dhpltattlrnLgrlyralgryeeAlelleeala 73
                + p    tl   + +   +g++++A +l + al+
  KHJ32748.1 38 KTPKHGDTLAMKALIMNSQGKTADAFALAKVALQ 71
                3455577888889999999999999999999987 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0037
      TPR_12   9 laavlrrlgrydeAlellekale 31 
                 +++++r +++++eA++ ++ al 
  KHJ32748.1  83 YGLLYRTAKNFEEAIKAYKFALK 105
                 45555555555555555555554 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.11
      TPR_12  50 nLgrlyralgryeeAlellee 70 
                 +L+ ++++ g++ eA++ l+ 
  KHJ32748.1 150 ALAVAHHLNGDPNEAERVLTS 170
                 689999999999999988765 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.97
      TPR_12  57 algryeeAlelleea 71 
                 ++g+++ Al++l+ a
  KHJ32748.1 199 EQGEFQRALDHLNTA 213
                 567777777776654 PP

  == domain 5  score: 2.4 bits;  conditional E-value: 0.28
      TPR_12  26 lekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelle 69 
                 +++al+  + + G+  ++ +++l   + ++ +lg  ++A++ ++
  KHJ32748.1 203 FQRALDHLN-TAGKSCLDRLAVLELRANYLTKLGLKQDAIKTYR 245
                 556666663.3377777788888888888888888888877775 PP

  == domain 6  score: 0.0 bits;  conditional E-value: 1.6
      TPR_12   3 atalnnlaavlrrlgrydeAlellekaleiarrl 36 
                 +++l  +a+ l++lg  ++A++ ++  l++ +++
  KHJ32748.1 221 LAVLELRANYLTKLGLKQDAIKTYRILLDRNSEY 254
                 5667689999999999999999999888887665 PP

  == domain 7  score: 8.2 bits;  conditional E-value: 0.0043
      TPR_12  13 lrrlgrydeAlellekaleia.rrllGpdhpltattlrnLgrlyralg 59 
                 ++   ++++A ++ eka+e+  +++    +   a+++  Lg++  a++
  KHJ32748.1 383 YHLNRDLEKAMKYIEKAIELDsQSV--NFYMTKARIYKHLGDVAKASE 428
                 5556678888888888888884444..577777777777777765544 PP

  == domain 8  score: 1.0 bits;  conditional E-value: 0.79
      TPR_12  10 aavlrrlgrydeAlellekaleia 33 
                 ++ ++r+g+   Al+ +   ++i+
  KHJ32748.1 493 GESYARQGKIGLALKRFTSIYNIF 516
                 455666666666666666666665 PP

>> TPR_4  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.1     0.001      0.69       6      24 ..     150     168 ..     148     168 .. 0.93
   2 ?    1.2   0.0       1.2   8.2e+02      12      24 ..     198     210 ..     196     212 .. 0.90
   3 ?    1.6   0.0       0.9   6.2e+02       8      25 ..     414     431 ..     409     432 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.001
       TPR_4   6 aLArallalGdldeArall 24 
                 aLA a+++ Gd+ eA+++l
  KHJ32748.1 150 ALAVAHHLNGDPNEAERVL 168
                 8****************97 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 1.2
       TPR_4  12 lalGdldeArall 24 
                 +++G++ +A+++l
  KHJ32748.1 198 AEQGEFQRALDHL 210
                 78*********98 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.9
       TPR_4   8 ArallalGdldeAralle 25 
                 Ar + +lGd + A +++e
  KHJ32748.1 414 ARIYKHLGDVAKASEVME 431
                 89999********88876 PP

>> Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1     0.018        12      13      44 ..      21      52 ..      17      56 .. 0.86
   2 !    7.1   0.3    0.0079       5.5      15      38 ..      91     114 ..      87     125 .. 0.91
   3 ?    1.4   0.0      0.51   3.5e+02      24      38 ..     261     275 ..     250     276 .. 0.71
   4 ?   -0.1   0.1       1.4   9.9e+02      15      31 ..     387     403 ..     374     406 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.018
                HHT-HHHHHHHHHHHHHHTTS-HHHHHHHHHH CS
  Fis1_TPR_C 13 klgeYseArryvdalLeiEPenrQaqsLkeli 44
                  ++Y++ ++ +d++L++ P+    ++ k+li
  KHJ32748.1 21 EDKQYKKGLKTADQILRKTPKHGDTLAMKALI 52
                5589****************999888888887 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0079
                 T-HHHHHHHHHHHHHHTTS-HHHH CS
  Fis1_TPR_C  15 geYseArryvdalLeiEPenrQaq 38 
                 ++++eA +  +  L++EPe +Q q
  KHJ32748.1  91 KNFEEAIKAYKFALKLEPESQQIQ 114
                 89********************98 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.51
                 HHHHHHHTTS-HHHH CS
  Fis1_TPR_C  24 vdalLeiEPenrQaq 38 
                 +  ++eiEP+n+ a+
  KHJ32748.1 261 LIKVMEIEPSNHTAL 275
                 55679******9886 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 1.4
                 T-HHHHHHHHHHHHHHT CS
  Fis1_TPR_C  15 geYseArryvdalLeiE 31 
                 ++ ++A++y++  +e++
  KHJ32748.1 387 RDLEKAMKYIEKAIELD 403
                 68899*****9988875 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.23   1.6e+02       7      31 ..      85     107 ..      80     113 .. 0.78
   2 ?    3.0   0.0      0.19   1.3e+02       3      23 ..     149     169 ..     148     171 .. 0.90
   3 ?   -0.4   0.0       2.2   1.5e+03      11      21 ..     199     209 ..     195     215 .. 0.86
   4 ?    0.1   0.1       1.6   1.1e+03       6      24 ..     228     246 ..     217     253 .. 0.79
   5 ?    3.8   0.1       0.1        71      11      29 ..     385     403 ..     373     408 .. 0.73
   6 ?    4.5   0.0     0.059        41       6      34 ..     414     440 ..     411     442 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.23
       TPR_7   7 rlysrlGdyeeAielyeqsLaltkd 31 
                  ly+   ++eeAi+ y+   al  +
  KHJ32748.1  85 LLYRTAKNFEEAIKAYKF--ALKLE 107
                 67888889********98..44444 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.19
       TPR_7   3 lnLarlysrlGdyeeAielye 23 
                  +La++++  Gd  eA+++++
  KHJ32748.1 149 TALAVAHHLNGDPNEAERVLT 169
                 69**************99876 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 2.2
       TPR_7  11 rlGdyeeAiel 21 
                 ++G++++A+++
  KHJ32748.1 199 EQGEFQRALDH 209
                 69******987 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 1.6
       TPR_7   6 arlysrlGdyeeAielyeq 24 
                 a+   +lG  ++Ai+ y+ 
  KHJ32748.1 228 ANYLTKLGLKQDAIKTYRI 246
                 6667789999******987 PP

  == domain 5  score: 3.8 bits;  conditional E-value: 0.1
       TPR_7  11 rlGdyeeAielyeqsLalt 29 
                   +d e+A ++ e++++l+
  KHJ32748.1 385 LNRDLEKAMKYIEKAIELD 403
                 46899*********66555 PP

  == domain 6  score: 4.5 bits;  conditional E-value: 0.059
       TPR_7   6 arlysrlGdyeeAielyeqsLaltkdped 34 
                 ar+y  lGd ++A e+ e   a t d+ d
  KHJ32748.1 414 ARIYKHLGDVAKASEVMEH--ARTLDERD 440
                 89**************999..88777765 PP

>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       3.6   2.5e+03      45      62 ..      86     103 ..      78     113 .. 0.80
   2 ?    7.9   0.3    0.0033       2.3      37      83 ..     222     268 ..     192     285 .. 0.80
   3 ?    8.7   0.3    0.0019       1.3      49     115 ..     386     447 ..     366     512 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 3.6
                 HHHHCT-HHHHHHHHHTC CS
        RPN7  45 hYlkigdleeAlkaysri 62 
                  Y ++ ++eeA+kay+ +
  KHJ32748.1  86 LYRTAKNFEEAIKAYKFA 103
                 688899999999999865 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0033
                 HHHHHHHHHHHHCT-HHHHHHHHHTCCCC--SHHHHHHHHHHHHHHH CS
        RPN7  37 rakldlaehYlkigdleeAlkaysrireyctslkhkidmllnlirva 83 
                 +  + +a++ +k g ++ A+k+y+ +++  +  k   d l+++++++
  KHJ32748.1 222 AVLELRANYLTKLGLKQDAIKTYRILLDRNSEYKTYYDSLIKVMEIE 268
                 44677899***********************************9985 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.0019
                 CT-HHHHHHHHHTCCCC--SHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHCSSS---.HHHHHHH CS
        RPN7  49 igdleeAlkaysrireyctslkhkidmllnlirvaiffndwdlvskylekakellekggdwerknrl 115
                   dle+A+k+ ++++e  ++   +++ +++  r+   ++d +++s+++e a++l e+  d+  +++ 
  KHJ32748.1 386 NRDLEKAMKYIEKAIELDSQ---SVNFYMTKARIYKHLGDVAKASEVMEHARTLDER--DRHINTKA 447
                 45899********9998876...89****************************9999..54444443 PP

>> HTH_Tnp_IS630  Transposase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.6   0.00031      0.21       9      72 ..     390     459 ..     382     469 .. 0.78
   2 ?    0.8   0.0      0.69   4.8e+02       3      49 ..     570     613 ..     569     635 .. 0.75
   3 ?   -1.5   0.0       3.6   2.5e+03       5      37 ..     657     689 ..     656     708 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00031
  HTH_Tnp_IS630   9 lkvidyiesGggitkaskvfkvgratvyrWlkreela......atkvetrkrkidrkelkedvkknpdal 72 
                     k+++yie   +++  s  f +++a +y+ l+ +  a      a   ++r r i++k+ k  +++n   +
     KHJ32748.1 390 EKAMKYIEKAIELDSQSVNFYMTKARIYKHLGDVAKAsevmehARTLDERDRHINTKAAKYQLRNNESEK 459
                    599****************************9887761111113345678899***99999999987654 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.69
  HTH_Tnp_IS630   3 ydldlrlkvidyiesGggitkaskvfkvgratvyrWlkreelaatkv 49 
                    yd+ l  +v   ie G++ t+ +k    +++++ + lk e+ aa k 
     KHJ32748.1 570 YDRPLASRVNGNIENGHDPTEKKKA---AKKAMKEHLKAEREAAAKK 613
                    8888999999999999999998875...6666777777777776665 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 3.6
  HTH_Tnp_IS630   5 ldlrlkvidyiesGggitkaskvfkvgratvyr 37 
                    l+lr+k id   +G +i   +k + ++ + + +
     KHJ32748.1 657 LQLRQKSIDVQAAGFEIYIRKKKYFLALRCLLK 689
                    579999999999999998888888888777665 PP

>> Wzy_C_2  Virulence factor membrane-bound polymerase, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       6.7   4.7e+03     110     134 ..      43      67 ..      13      72 .. 0.57
   2 ?   11.7   0.0   0.00027      0.19     115     170 ..     116     172 ..     109     174 .. 0.90
   3 ?   -2.5   0.0       5.9   4.1e+03     149     171 ..     413     435 ..     389     446 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 6.7
     Wzy_C_2 110 yadllelgllplspenlaaklalar 134
                  ++l++ +l+++s+ + a+ +ala+
  KHJ32748.1  43 GDTLAMKALIMNSQGKTADAFALAK 67 
                 3455556666666666666666665 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00027
     Wzy_C_2 115 elgllplspenlaaklalarklihlsPepav.ierlilslallGdedeAeqilarar 170
                  l+ll+++  +++ ++    +++++ P+ +v  + l+++  l+Gd+ eAe++l  ++
  KHJ32748.1 116 DLALLQIQMRDYQGYIVSRTAMVKSRPGFRVnWTALAVAHHLNGDPNEAERVLTSYE 172
                 578999999*********************95689*****************99886 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 5.9
     Wzy_C_2 149 lilslallGdedeAeqilarara 171
                  +  +  lGd ++A  +++ ar 
  KHJ32748.1 413 KARIYKHLGDVAKASEVMEHART 435
                 55667889999999999999986 PP

>> TPR_3  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.2    0.0024       1.6      14      35 ..      90     109 ..      80     109 .. 0.83
   2 ?    1.5   0.0      0.45   3.1e+02      14      29 ..     393     406 ..     392     409 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0024
                 TT-HHHHHHH..HHHHHHH-TT CS
       TPR_3  14 kkkyqeArelfsYallaildke 35 
                  k+++eA+ +  Y+++ +l++e
  KHJ32748.1  90 AKNFEEAIKA--YKFALKLEPE 109
                 59********..99*****986 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.45
                 TT-HHHHHHH..HHHH CS
       TPR_3  14 kkkyqeArelfsYall 29 
                 +k +++A+el+s  ++
  KHJ32748.1 393 MKYIEKAIELDS--QS 406
                 6779*******9..76 PP

>> Prok-TraM  Prokaryotic Transcriptional repressor TraM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.1    0.0023       1.6      35      82 ..     239     289 ..     220     295 .. 0.84
   2 ?    1.4   0.1      0.58     4e+02      57      88 ..     584     615 ..     559     618 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0023
                 HHHHHHHHHHHHHH...HHHHCHHHSCHHHHTTSCHHSHHHHHHHHHHHHH CS
   Prok-TraM  35 sAIrehRrllaaae...avyeewvrasadekvseavleelqeeYveaqkes 82 
                 +AI+++R ll+++    + y+ ++++ + e +++ +l++ ++eY e+  + 
  KHJ32748.1 239 DAIKTYRILLDRNSeykTYYDSLIKVMEIEPSNHTALKAIYDEYAEKYPRC 289
                 8**********98622257999**********************9987665 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.58
                 SCHHHHTTSCHHSHHHHHHHHHHHHHHHHHHH CS
   Prok-TraM  57 asadekvseavleelqeeYveaqkeseaqqee 88 
                   +d+  ++++ +++ +e+++a+ e  a++++
  KHJ32748.1 584 NGHDPTEKKKAAKKAMKEHLKAEREAAAKKSA 615
                 5678888999999***************9986 PP

>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1    0.0014      0.93       2      38 .]     372     404 ..     371     404 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.0014
        Sel1   2 eAmyrLGmfylylnGlgvpkDpekAiewyekAAeqGd 38 
                 +A+y L+  + + +   + +D ekA+++ ekA e+++
  KHJ32748.1 372 AACYFLA--QHFNYH--LNRDLEKAMKYIEKAIELDS 404
                 6999999..855555..599*************9985 PP

>> YfdX  YfdX protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.81   5.6e+02     126     145 ..     158     177 ..     148     181 .. 0.80
   2 ?    2.4   0.2      0.19   1.3e+02      51      94 ..     419     464 ..     384     470 .. 0.62
   3 ?    7.0   0.8    0.0074       5.1      59      91 ..     582     612 ..     572     614 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.81
                 TT-HHHHHHHHHHHHHT-EE CS
        YfdX 126 egkyyeAkeaLkealntlvf 145
                 +g+++eA  +L++ ++tl +
  KHJ32748.1 158 NGDPNEAERVLTSYEDTLKI 177
                 699***********999976 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.19
                 -EEEEEEEEEEE------HHHHHHHH..HHHHHHHTT-HHHHHHHH CS
        YfdX  51 alvPvdaevividdladtpekkaaik..kanellkkgdtqaArelL 94 
                 +l  v+ + +v +   +++e  ++i+  +a+ +l++++ ++A++++
  KHJ32748.1 419 HLGDVAKASEVMEHARTLDERDRHINtkAAKYQLRNNESEKAIKIM 464
                 4666777777777777788888887522588899999999999888 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0074
                 EEEE------HHHHHHHHHHHHHHHTT-HHHHH CS
        YfdX  59 vividdladtpekkaaikkanellkkgdtqaAr 91 
                 ++   d  +t++kkaa k+++e+lk+++ +aA 
  KHJ32748.1 582 IENGHD--PTEKKKAAKKAMKEHLKAEREAAAK 612
                 444555..5********************9997 PP

>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       6.1   4.2e+03      32     105 ..       6      81 ..       3      82 .. 0.64
   2 ?   10.3   0.3    0.0008      0.55      37      92 ..     379     432 ..     377     447 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 6.1
     DUF1451  32 tkeelelvaeylkr.Dleeaarsleeske.eleewlsldlelieesllealasiaDktqvelaelaedlehagvyq 105
                 +++e +l++  +++ + +++++ l++ ++   ++ ++ d+ ++++ ++++  + aD   +   +l+ d++++ +++
  KHJ32748.1   6 SAKEQSLFRTVVRNyEDKQYKKGLKTADQiLRKTPKHGDTLAMKALIMNSQGKTADAFALAKVALQCDMKSHVCWH 81 
                 5555555555555323345555555556633344566778888888888888888888888888888888887776 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0008
     DUF1451  37 elvaeylkrDleeaarsleeskeeleewlsldlelieesllealasiaDktqvela 92 
                 ++++  l+rDle+a++++e+  e   +++s+++ + ++++++ l ++a  ++v  +
  KHJ32748.1 379 QHFNYHLNRDLEKAMKYIEKAIE--LDSQSVNFYMTKARIYKHLGDVAKASEVMEH 432
                 677889****************9..5799*******************99988554 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       6.6   4.6e+03      11      28 ..      20      37 ..       7      42 .. 0.54
   2 ?    6.7   0.1     0.019        13       7      33 .]      84     110 ..      82     110 .. 0.90
   3 ?    3.5   0.1      0.19   1.3e+02      13      29 ..     228     250 ..     217     254 .. 0.73
   4 ?   -1.0   0.1       5.2   3.6e+03      20      31 ..     276     287 ..     272     288 .. 0.83
   5 ?    3.0   0.1      0.28     2e+02       9      29 ..     374     402 ..     371     406 .. 0.74
   6 ?    0.9   0.0       1.3   8.9e+02       7      24 ..     414     431 ..     411     435 .. 0.89
   7 ?   -1.0   0.1       5.3   3.7e+03       7      24 ..     448     465 ..     446     469 .. 0.74
   8 ?   -1.5   0.0       7.6   5.2e+03       7      25 ..     493     511 ..     493     516 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 6.6
                HHHHHHHHHHHHHHHHHH CS
       TPR_6 11 rklgdtdkAlealerlik 28
                ++ +++ k l++ +++++
  KHJ32748.1 20 YEDKQYKKGLKTADQILR 37
                232366666666666655 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.019
                 HHHHHHHHHHHHHHHHHHHHHHH-TT- CS
       TPR_6   7 alsyrklgdtdkAlealerlikeYPdS 33 
                 +l+yr +++ ++A++a++  +k  P+S
  KHJ32748.1  84 GLLYRTAKNFEEAIKAYKFALKLEPES 110
                 89999999**********999999987 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.19
                 H......HHHHHHHHHHHHHHHH CS
       TPR_6  13 l......gdtdkAlealerlike 29 
                 +      g +++A+++++ l+++
  KHJ32748.1 228 AnyltklGLKQDAIKTYRILLDR 250
                 3344445999**********998 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 5.2
                 HHHHHHHHHH-T CS
       TPR_6  20 lealerlikeYP 31 
                 ++++++  ++YP
  KHJ32748.1 276 KAIYDEYAEKYP 287
                 4599*******9 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.28
                 HHHH.H.......HHHHHHHHHHHHHHHH CS
       TPR_6   9 syrk.l.......gdtdkAlealerlike 29 
                 +y+  +        d +kA+++ e+ i+ 
  KHJ32748.1 374 CYFLaQhfnyhlnRDLEKAMKYIEKAIEL 402
                 66663477777767***********9986 PP

  == domain 6  score: 0.9 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAleale 24 
                 a+ y+ lgd +kA e +e
  KHJ32748.1 414 ARIYKHLGDVAKASEVME 431
                 8999**99*****99876 PP

  == domain 7  score: -1.0 bits;  conditional E-value: 5.3
                 HHHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAleale 24 
                 a+ +++ ++++kA++++ 
  KHJ32748.1 448 AKYQLRNNESEKAIKIMG 465
                 5556677899****9986 PP

  == domain 8  score: -1.5 bits;  conditional E-value: 7.6
                 HHHHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAlealer 25 
                 ++sy ++g+   Al+ + +
  KHJ32748.1 493 GESYARQGKIGLALKRFTS 511
                 7899999999888888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (765 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1212  (0.0676); expected 358.6 (0.02)
Passed bias filter:                      588  (0.032796); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 0.77u 0.28s 00:00:01.05 Elapsed: 00:00:00.48
# Mc/sec: 4810.60
//
Query:       KHJ32749.1  [L=1498]
Description: putative histone deacetylase complex protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-60  204.6   0.0    2.5e-60  204.6   0.0    3.9  5  Sin3a_C          C-terminal domain of Sin3a protein
    1.7e-42  143.3   8.2    2.1e-17   62.9   0.0    4.2  3  PAH              Paired amphipathic helix repeat
    2.2e-39  133.5   0.1    2.5e-38  130.1   0.0    2.8  2  Sin3_corepress   Sin3 family co-repressor
  ------ inclusion threshold ------
      0.053   10.7  21.5      0.083   10.0  21.5    1.2  1  GREB1            Gene regulated by oestrogen in breast cancer
       0.39   10.5  24.3       0.95    9.2  24.3    1.6  1  Band_3_cyto      Band 3 cytoplasmic domain
        7.1    6.0  30.2         21    4.4  30.2    1.7  1  Endostatin       Collagenase NC10 and Endostatin


Domain annotation for each model (and alignments):
>> Sin3a_C  C-terminal domain of Sin3a protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -20.1  27.8         6   1.8e+04     214     238 ..     128     152 ..      75     188 .. 0.47
   2 ?   -3.3   0.0       1.9   5.8e+03      65      87 ..     261     283 ..     248     285 .. 0.76
   3 ?   -3.4   0.0         2     6e+03      55      79 ..     470     491 ..     403     495 .. 0.66
   4 ?   -4.0   0.3       3.1   9.2e+03     204     243 ..     904     949 ..     883     982 .. 0.50
   5 !  204.6   0.0   8.4e-64   2.5e-60       1     284 [.    1146    1426 ..    1146    1428 .. 0.92

  Alignments for each domain:
  == domain 1  score: -20.1 bits;  conditional E-value: 6
     Sin3a_C 214 tegvereklkkvfLkRnlkaerkee 238
                 +++ +++++++   +   +++++++
  KHJ32749.1 128 QQQQHQQQQQQQHQQQQQQQQQQHQ 152
                 1111111111111111111111111 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.9
     Sin3a_C  65 eeeeeyYsqllelveklldGeid 87 
                  ++ ++Y+++l+ ++++    id
  KHJ32749.1 261 ADQPDVYNRFLDIMKDFKSQVID 283
                 567899******99998666555 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 2
     Sin3a_C  55 ealalrleseeeeeeyYsqllelve 79 
                 +++++   + +e+ e+Y+q+le ++
  KHJ32749.1 470 NKIKN---RFQERPEIYKQFLEILQ 491
                 33333...44888899999999876 PP

  == domain 4  score: -4.0 bits;  conditional E-value: 3.1
     Sin3a_C 204 Yves.Yvlveptegv.....ereklkkvfLkRnlkaerkeeekkee 243
                   +s Y+ + +  g+     ++++   ++L  ++k++ +e++++ +
  KHJ32749.1 904 QTASlYLKSLDHMGIqvktkDKREYSAKYLVDSIKTKYEEQRRARS 949
                 4444444443444443332222333333555555444333333332 PP

  == domain 5  score: 204.6 bits;  conditional E-value: 8.4e-64
     Sin3a_C    1 FfaNttfYvflrlfqiLyeRLlkikqaeeqvaeevkerkankvavelgldkkesealalrleseeeeeeyYsqllelveklldGeidqsqfEdslRe 97  
                  +++N+t+Yvf+++fq+Ly+RL+++k +e+++ e  ++++ +k+a+e+gld   + ++       ++ e+yYs+  +l+e+++ G+++++++++ lR+
  KHJ32749.1 1146 LWCNQTIYVFMSIFQTLYRRLKDLKLSEQDAVESGNRASLPKPAKEIGLD---NRQVTP---PPINGESYYSRAKKLIEDFISGDVEEASYQNWLRQ 1236
                  69************************************************...333333...34799****************************** PP

     Sin3a_C   98 mfgikaYklfTldKliqalvkqlqtiv.sDek..cqellelfekerskeettsqdeisyrkkaekllkdenlfriewkseskkltiqlldkddetld 191 
                  ++++k+++++T+ +l+++l + +  ++ +D k  + + ++ f ++r++ +tt+++e++ r +a k++kd++lf i+w+s+++++++ ++ kdd+t+d
  KHJ32749.1 1237 YYLKKGWQVYTILDLLKSLSRSAAICSsNDPKekTPDFIHRFYQNRQSPQTTYNTELELRVRASKFIKDGELFMIQWNSKKSEANVSIVYKDDTTFD 1333
                  ***************************8786666*************************************************************** PP

     Sin3a_C  192 ddeveaeerwkeYvesYvlveptegv............ereklkkvfLkRnlkaerkeeekkeeeeqekaekeeeaekeleveekleiriclnsykl 276 
                   + + +++ w++Yv+s+ + eptegv            +r++  k+ L Rnl+++            ++a+++e+  k+l +ee+l +ri++n+ykl
  KHJ32749.1 1334 PHGMGQSQSWQYYVASWQRNEPTEGVprnsrfwpprgpNRKEFGKTILHRNLETA------------SAASEDEDILKNLVFEENLVVRIEANTYKL 1418
                  *99889****************************999988999999******332............2223333567889999************** PP

     Sin3a_C  277 vyvpgted 284 
                   y +g  d
  KHJ32749.1 1419 EYNKGGAD 1426
                  ****9988 PP

>> PAH  Paired amphipathic helix repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.9   0.0   7.2e-21   2.1e-17       1      45 []     265     309 ..     265     309 .. 0.99
   2 !   59.9   2.3   6.5e-20   1.9e-16       1      45 []     481     525 ..     481     525 .. 0.99
   3 !   21.0   0.2   8.9e-08   0.00027       4      45 .]     668     709 ..     666     709 .. 0.96

  Alignments for each domain:
  == domain 1  score: 62.9 bits;  conditional E-value: 7.2e-21
         PAH   1 evYkeFLdiLhdyqkeqidskeVyeqVskLFhdhpdLlreFnqFL 45 
                 +vY++FLdi++d++++ id+++V+ +Vs+LF++hp L+++Fn+FL
  KHJ32749.1 265 DVYNRFLDIMKDFKSQVIDTPGVINRVSDLFAGHPNLIQGFNTFL 309
                 79******************************************8 PP

  == domain 2  score: 59.9 bits;  conditional E-value: 6.5e-20
         PAH   1 evYkeFLdiLhdyqkeqidskeVyeqVskLFhdhpdLlreFnqFL 45 
                 e+Yk+FL+iL++yq+e++ +++Vy+qV  LF   pdLl++F+qFL
  KHJ32749.1 481 EIYKQFLEILQTYQRESKPIQDVYTQVTHLFNTAPDLLEDFKQFL 525
                 89******************************************8 PP

  == domain 3  score: 21.0 bits;  conditional E-value: 8.9e-08
         PAH   4 keFLdiLhdyqkeqidskeVyeqVskLFhdhpdLlreFnqFL 45 
                 +eFL++++ ++++ i ++ ++++   ++  + dL+++F+ F+
  KHJ32749.1 668 NEFLKLCNLFSQDLIEKNVLVHKATAFIGQNTDLMKWFKDFV 709
                 89**************************************95 PP

>> Sin3_corepress  Sin3 family co-repressor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.1   0.0   8.3e-42   2.5e-38       3      98 .]     737     831 ..     735     831 .. 0.98
   2 ?   -1.0   0.0      0.64   1.9e+03      21      72 ..    1372    1420 ..    1364    1431 .. 0.70

  Alignments for each domain:
  == domain 1  score: 130.1 bits;  conditional E-value: 8.3e-42
  Sin3_corepress   3 lgpsYrlLpksyqqpkcsgrdelekevLNdewvsvptwasedsgsfkasrknqyeealfrcEderyelDmvieanrstiklleelakkiesmsee 97 
                     +gpsYrlLp++++++ csgrde++++vLNd+w+s+ptwasedsg f+a+rkn +ee+l+r+E+er+++D++iean+++i+lle++ ++i sm++e
      KHJ32749.1 737 FGPSYRLLPRREKSKLCSGRDEMCNQVLNDDWASHPTWASEDSG-FVAHRKNTFEESLHRIEEERHDYDFNIEANAKVIQLLEPIGQSILSMEPE 830
                     79*****************************************8.***********************************************999 PP

  Sin3_corepress  98 e 98 
                     e
      KHJ32749.1 831 E 831
                     7 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.64
  Sin3_corepress   21 grdelekevLNdewvsvptwasedsgsfkasrknqyeeal.frcEderyelDm 72  
                      +r+e  k +L  ++   ++ ased++   + +   +ee+l +r+E + y l++
      KHJ32749.1 1372 NRKEFGKTILHRNLE-TASAASEDED---ILKNLVFEENLvVRIEANTYKLEY 1420
                      678888888877774.5567789984...557778888762578888887766 PP

>> GREB1  Gene regulated by oestrogen in breast cancer
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0  21.5   2.8e-05     0.083    1157    1236 ..      98     174 ..      19     213 .. 0.50

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 2.8e-05
       GREB1 1157 esglsskasakselseasaaaasaseeakspkasvtseeeeseeskekekeslsketesqlsleaseqkealdakassks 1236
                  +++++ + +++++++ ++++++++++++++++++ + +++++++++++++++++ ++++q ++++++q+++ +++++ ++
  KHJ32749.1   98 SNQQQHQ-QQHPQQQ-HQQQQHPQQQHQQQQQQQQQHQQQQQQQHQQQQQQQQQ-QHQQQQHQQQQQQQHQQQQQQQQQQ 174 
                  1111111.1111111.11222222222222211111111111111111111111.1111111111111111111111111 PP

>> Band_3_cyto  Band 3 cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2  24.3   0.00032      0.95      77     195 ..     102     224 ..      85     227 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00032
                  E-CCH...HHHHT-EEE-EE-TTS----------EE--SSS-SS-HHHHHHTTTTTSS--..........--SSTTGGGCCGGGS-TT-EEEEEEEEE CS
  Band_3_cyto  77 rHqne...ekekgvllptvrslssigsllsekkkaskellskqssleteeakaseslskssseeslsssleeekkkkkekilkkipegaEatlvLvge 171
                  +Hq++   ++++++  p ++++++  ++++++++++++++++q+++++++++++++ +++++++++++++++++++  +++   i +    t   +g+
   KHJ32749.1 102 QHQQQhpqQQHQQQQHPQQQHQQQ--QQQQQQHQQQQQQQHQQQQQQQQQQHQQQQHQQQQQQQHQQQQQQQQQQQPGSNFGSNITHHNSVTGTGIGS 197
                  444442212445545555544444..444444555555566666666666666666666666677777777778888889999999999999999999 PP

                  ETT...SSS-EEEEEEEEEEE--TTTS CS
  Band_3_cyto 172 vdf...LerpviafvRLseaveledlt 195
                  + +   L+ +  a +RL++a ++++ t
   KHJ32749.1 198 IALpgsLKPQQDAILRLQQALPFSAST 224
                  987666888888999999998877665 PP

>> Endostatin  Collagenase NC10 and Endostatin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4  30.2    0.0071        21      51     139 ..      95     188 ..      78     207 .. 0.40

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0071
  Endostatin  51 pllselek....kenevaavqpsPvvksskerlvllearrktksskesvkakekeaskeeleekaekkveesekslttarraskke..peaaaet 139
                 +l+s++++    + ++++++q++P  + ++++++++++++++++++++++++++ ++++++++++++++++++++++++++++ ++  ++ ++++
  KHJ32749.1  95 HLTSNQQQhqqqHPQQQHQQQQHPQQQHQQQQQQQQQHQQQQQQQHQQQQQQQQ-QQHQQQQHQQQQQQQHQQQQQQQQQQQPGSNfgSNITHHN 188
                 333333222222223333344446655555544444333333333222222222.2222222222222222222222222222222333444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1498 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      4841  (0.270009); expected 358.6 (0.02)
Passed bias filter:                     1170  (0.0652574); expected 358.6 (0.02)
Passed Vit filter:                       745  (0.0415528); expected 17.9 (0.001)
Passed Fwd filter:                       164  (0.00914719); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 2.66u 0.38s 00:00:03.04 Elapsed: 00:00:00.61
# Mc/sec: 7394.89
//
Query:       KHJ32750.1  [L=387]
Description: putative duf1713 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-11   44.1  18.8    2.9e-11   43.1  18.8    1.5  1  DUF1713   Mitochondrial domain of unknown function (DUF1713)
  ------ inclusion threshold ------
      0.029   15.1   0.3      0.086   13.6   0.0    2.0  2  Pet20     Mitochondrial protein Pet20


Domain annotation for each model (and alignments):
>> DUF1713  Mitochondrial domain of unknown function (DUF1713)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.1  18.8   3.2e-15   2.9e-11       1      32 [.     327     358 ..     327     358 .. 0.96

  Alignments for each domain:
  == domain 1  score: 43.1 bits;  conditional E-value: 3.2e-15
     DUF1713   1 adSVlrKRrkKMkKHKyKKlrKrtRflrrklg 32 
                 a+SV+r+R++KMkKHKyKKl+++tR+lrr+l+
  KHJ32750.1 327 AISVKRQRKLKMKKHKYKKLMRKTRNLRRRLD 358
                 68****************************96 PP

>> Pet20  Mitochondrial protein Pet20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   9.6e-06     0.086       2      68 ..     107     218 ..     106     250 .. 0.65
   2 ?   -2.6   0.0      0.98   8.8e+03      56      69 ..     335     348 ..     310     369 .. 0.54

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 9.6e-06
       Pet20   2 lPkVptTdyleskelttdiLfaGYrPl.........................................llpvkenillveankkkekeeklneqevlee 59 
                 +P Vp+T++++ + l     f+  rP+                                         l  v+e +  +++++++++  + +e + +++
  KHJ32750.1 107 IPSVPSTQHIKPSLLGPAAFFSLHRPIsitngfpqpvtdedfasifaprtrstkpqevilalsstldsLNAVRESLDTLSSESQQNQWAEIDETDAVKN 205
                 8**************************999999999999999999888888877777766655544444444444444333333332222222222222 PP

       Pet20  60 e....ekeieela 68 
                 e    ++ei+ l+
  KHJ32750.1 206 EsilqSPEIQRLQ 218
                 2233344444444 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.98
       Pet20  56 vleeeekeieelak 69 
                 +l+ +++++++l++
  KHJ32750.1 335 KLKMKKHKYKKLMR 348
                 22222223333222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1090  (0.0607954); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2961.44
//
Query:       KHJ32751.1  [L=491]
Description: putative udp-n-acetylglucosamine pyrophosphorylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.9e-53  181.0   0.0      4e-53  180.6   0.0    1.1  1  UDPGP         UTP--glucose-1-phosphate uridylyltransferase
  ------ inclusion threshold ------
      0.084   13.2   0.0       0.16   12.3   0.0    1.4  1  NTP_transf_3  MobA-like NTP transferase domain


Domain annotation for each model (and alignments):
>> UDPGP  UTP--glucose-1-phosphate uridylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.6   0.0   4.4e-57     4e-53       8     338 ..      54     418 ..      48     422 .. 0.84

  Alignments for each domain:
  == domain 1  score: 180.6 bits;  conditional E-value: 4.4e-57
       UDPGP   8 feryleekskqekidwdkieplpeee...vvd..yedlkekeeekkell....nklavlkLnGglGtsmGckgpKslieVr..dgktfLdlivqqie.. 93 
                 ++++l++++ ++k d+ ++e++p+++   ++d   e++  +++++  l     n +av+ ++Gg+Gt++G + pK+ ++++  +gk++++l++++i   
  KHJ32751.1  54 ADQTLNCST-KKKDDQGSLETIPQSAtasTIDssSEEI--ETWHDIGLNliarNEVAVVLMAGGQGTRLGSSLPKGCFNINlpSGKSLFQLQAERIIkv 149
                 566666543.4555667777777666322222112334..44444333245679************************99999************9866 PP

       UDPGP  94 ......elnkkynvdvPlvlmnSfnTdedtekilk..kykk.kkvdiltfnqsryPriskesllpvekkakkeekeewyPpGhGdlyesLknsglldkl 183
                       ++  ++ + vP+++m+S  T e te++l+   y++ +k++++ f+q+ +P +s+e ++ +e+k k     + +P+G+G++y++L++s+++ ++
  KHJ32751.1 150 qelakqRVGGNSRIIVPWYIMTSGPTREPTENFLEsnGYFGlQKENVKIFEQGVLPCLSNEGKILLENKGK----VAVAPDGNGGIYQALVTSKIIMDM 244
                 666655555667889********************9889999************************99986....89********************** PP

       UDPGP 184 laeGkeyiFvsniDN.lgatvDlkilnllvekkaeflmevtektradvkgGtlieyegklrlleiaqvpkehveefksvk.....kfkifntnniwinl 276
                  ++G+++++ +++DN l++++D+ ++++ ++k+++ + +v++k +a++ +G ++ ++g+  ++e++++  e ++  ++++     kf+  n  n + ++
  KHJ32751.1 245 RNRGIKHVHAYCVDNcLVKVADPVFIGFSASKGVDIATKVVRKKNAKEPVGLIVLKNGRPSVVEYSEIDME-TAATMDIDhpqllKFRAANIVNHYYSF 342
                 ********************************************************************544.44444444221224445555555**** PP

       UDPGP 277 kalkrlv.eekelkleiivnk.ktld.egekviqletavgaaiksF..........kkavginVpR.srflpvktt 338
                 ++l+++    kel ++i+++k   +d +  + i+ e ++g+++++F          +k+ +++V+R ++f+p+k++
  KHJ32751.1 343 SFLETIPcWVKELPHHIARKKiAFVDtKTGEFIRPERPNGIKLEKFvfdcfsnlklEKFACLEVKReDEFSPLKNA 418
                 *****99566***********7778865566***********************************99******96 PP

>> NTP_transf_3  MobA-like NTP transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.8e-05      0.16       1      37 [.     108     149 ..     108     185 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.8e-05
                   EEEEEESS-TTTTT..THHHHCC...CCCCHHHHHHHHHCTT CS
  NTP_transf_3   1 aviLAGGrSsRmgg..dKallpl...ggkpllervldalraa 37 
                   +v++AGG+++R+g+  +K   ++    gk+l++ +++++ ++
    KHJ32751.1 108 VVLMAGGQGTRLGSslPKGCFNInlpSGKSLFQLQAERIIKV 149
                   5899*********99*****9998899999999999988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3382.66
//
Query:       KHJ32752.1  [L=192]
Description: putative fas1 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.19   12.0   0.0       0.26   11.5   0.0    1.3  1  Fasciclin  Fasciclin domain


Domain annotation for each model (and alignments):
>> Fasciclin  Fasciclin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   1.5e-05      0.26      16     126 ..      70     191 ..      55     192 .] 0.71

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 1.5e-05
                 CCCCTCSSSSEEEEEE-HHHHCCC......HHHHHHHHHT.......CHHHHHHHHHTTEEESSS-HHHHHHHHEEEECCTTSSEEEEEEEGGTTEEEE CS
   Fasciclin  16 aeeLnkkdgglTvFaPtneAfakl......ppellaklln.......dkkklkeiLkyHvvpetvsssalkkasetlatllegaklrvniekgngtvtv 101
                 ++++++++++ T+ aP n A+a++      +p++ ++l +       +k+ + + L+ +v +  +  s + ++ e+ +t l+g + + + ++ ++++  
  KHJ32752.1  70 TSKFEDGNSNKTIVAPANTAIAAMswkpweNPDEYNTLGSeayeggkGKERADQNLLRFVEAHIIPLSPWAEG-EKAKT-LAGREHWWHLKD-GHRIIQ 165
                 4677778889***********9999988876666666666778888877777777777777777788888888.88888.888888888883.334444 PP

                 TTEEEEEEEEE.EESSEEEEEESS-T CS
   Fasciclin 102 ngkarvvrsdi.eatngvihvidkvL 126
                  g  +v++    e+++g + +id v+
  KHJ32752.1 166 PGDIKVLDVIRsESNDGELWIIDGVM 191
                 44466664333255557777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       290  (0.0161749); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1435.98
//
Query:       KHJ32753.1  [L=698]
Description: putative cell division control protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.8e-05   23.5   5.9    0.00073   20.1   5.9    2.5  1  Metallophos  Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   5.9   4.1e-08   0.00073       4     204 .]      99     436 ..      96     436 .. 0.61

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 4.1e-08
                  EEEESBTB......TTCCTHHHHHHHHHHHH.........HHHTTESEEEEESTSSSSS.............................HHHHHHHHHH CS
  Metallophos   4 lvigDlHl......algggqlddllkllddl.........lreekpdlvllaGDlvdrg.............................dlekellell 57 
                  ++++D+++       +++ +ld+l ++  d          ++   pd ++++GDl+d+g                              + k++    
   KHJ32753.1  99 IFLADPQIidphsyPSRPWPLDRLTTIHTDKylkrsyislQKTLHPDTLFFLGDLFDGGrewstfrtnvedaqwgeserptteqpfvkLWAKKYG--- 193
                  6677777777777755555566666555222333334444444699999999********99999999999999999999777777773333333... PP

                  HHHHHH...............................TSEEEEEC-TTS...CHHHHHHHHHHHHHHHHHHHEHH....................... CS
  Metallophos  58 aalvky...............................pipvylllGNHe...gfeeellnkygylgifsepwrsd....................... 98 
                                                       ++ +  l+GNH+   g +++++ +++++++f++++r d                       
   KHJ32753.1 194 -----DnywlqeydrfgeifykfwnagglnpepgqrgRKIISSLPGNHDlgfGDKIKISVRNRFQAYFGDVNRVDvignhtfvsidsvslsasgsdhq 286
                  .....22333333335555777777888889998885444599*******776455999999999999777777766644444444444444433333 PP

                  ...........HCEEETSEEEEEETTEEEEEEEESECEEE..........................THHHHHHHHHHHSCHHHHCCHHHHHHHHHHTT CS
  Metallophos  99 ...........aevfnnlplaslgsgslkvlllhGgspel..........................lvsldklgslnleleapepgdewlkdlekrek 159
                                                                                     +++++l + n+ + ++ +           + 
   KHJ32753.1 287 vtaitspvenfL---------------------------AkvqalkrrsvmrelgymagkdsliqyAHKIEDLATTNYTTLSSID-------PGLGSA 350
                  333332222221...........................0111112222222233333333333333344444444444444332.......222224 PP

                  CSEEEEEESSESS........................................CSSSCSCCHHHHHHH.HHHTTESEEEEESSSSE CS
  Metallophos 160 adwvivlgHsply........................................rgsgylfgdealedl.lkkygvdlvisGHtHvy 204
                    ++i+l+H+ply                                        ++++++ +++   +l    ++v  v+sG++H y
   KHJ32753.1 351 EFPTILLTHVPLYrepgtpcgpkrehwpptpppkgqhspvnpdernaisisrgYQYQNVLSPNDSIRLlSSVGNVVSVFSGDDHDY 436
                  45789999999999999999999999999999998888888888888888888666666777666677566677999999999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (698 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       465  (0.0259356); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4756.48
//
Query:       KHJ32754.1  [L=535]
Description: putative mitochondrial ribosomal protein dap3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.4e-89  297.6   0.0    1.2e-88  297.3   0.0    1.1  1  DAP3      Mitochondrial ribosomal death-associated protein 3
     0.0092   16.4   0.0      0.026   14.9   0.0    1.8  2  AAA_16    AAA ATPase domain


Domain annotation for each model (and alignments):
>> DAP3  Mitochondrial ribosomal death-associated protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  297.3   0.0   1.4e-92   1.2e-88       2     311 ..     206     514 ..     205     515 .. 0.99

  Alignments for each domain:
  == domain 1  score: 297.3 bits;  conditional E-value: 1.4e-92
                 ---SHHHHHHHHHTTS-SSS---EEEEE-SSSSSTTTTHHHHHHHGGGS--EEEEES-GGGGTSS-S--EEESTTSSEEE-HHHHHHHHHHHTTSSHHH CS
        DAP3   2 lvReetlelikklkkadkkkkvkrlvltGekgsGKSvlLlqalayAlekgwvvlhvpeaedlvngtteyapseseeklyvQpeataalLsrilkaNeev 100
                 l+Re ++ l ++l +a+++k+++r+v++G kgsGKS++Ll+a+a Al ++wvv+h+pea+d++n+ t+yap + +++l+ Q++ +a+lL  i kaN++v
  KHJ32754.1 206 LIREHSKILSDRLLQAQEQKTTVRMVIDGVKGSGKSMMLLHAMATALVNDWVVIHIPEAQDITNAVTDYAPIP-NSNLFSQNTLIAELLDIIAKANSKV 303
                 89***********************************************************************.************************* PP

                 HTT-EE-S-EE-SSS-EE-SSEEHHHHHHHHHH-SSSHHHHHHHHHHHHHHHTTSS--EEEEEE-GGGGSS-BS---TTS--B-GGGBHHHHTTHHH.. CS
        DAP3 101 LkklklskeyellkresvkagstLleLvklgikdaksawdvfqallkeLkaqskgrvpvlvtvDglnallkntkyksadkkpihahdLtlvkhfldlls 199
                 Lk++k+++++++    s + + t+++L++lg++++++aw+ fq +++e++++ +  +p+++ +Dgl+++lk + y ++d + ih++dL++++hf+d+ls
  KHJ32754.1 304 LKTMKVKEAHPAI-LASLESNCTIHRLCELGAREPEFAWPFFQNFWSEITREGN--PPIMICLDGLSHILKYSLYLRPDLSYIHSQDLAIIRHFTDYLS 399
                 ************9.****************************************..******************************************* PP

                 HS--SSS-EEEEE---SS-SS--SS---HHHHHTTTTT......GGG-S-E................EEE-----GGGTHHHHHHHHHTT---STTSSH CS
        DAP3 200 gksklknggvvvaLaatsssntpksatlevallqeear......pqldpYvkkydkrvaealkgkvepieveglskeEarslleyyadsgvlqekvnee 292
                 g ++ +ngg+   Laat +s++p s++le+a++++ ++       q dpY k+yd r  ++l+ +ve+++++glsk+E+r++ley+a+sg+l+++++e+
  KHJ32754.1 400 GVKTVPNGGAF--LAATNRSHAPVSQSLELAIKRSDDEaanrklSQHDPYEKNYDSRSDKMLA-DVEIFKLGGLSKNETRGFLEYWAKSGLLRSRIDEK 495
                 **********9..*********************999999***********************.*********************************** PP

                 HHHHHHHHTTSS-HHHHHH CS
        DAP3 293 lveeklslsgngnprelek 311
                 +v+ek++l g g+ +e+ +
  KHJ32754.1 496 TVTEKWVLGGHGIAGEIQR 514
                 *************999875 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   2.9e-06     0.026      14     144 ..     217     366 ..     208     394 .. 0.69
   2 ?   -2.7   0.0      0.74   6.6e+03      51      88 ..     401     435 ..     389     450 .. 0.55

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.9e-06
      AAA_16  14 salervrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdql..esaipy..salaqalareellrqllde........aesaeleawrek 100
                 ++l++  + ++  +++ G +G+GKs ++ +++  +  ++++++     q    + + y  ++  +++++++l+++lld         +++ ++ +++ +
  KHJ32754.1 217 RLLQAQEQKTTVRMVIDGVKGSGKSMMLLHAMATALVNDWVVIHIPEAQDitNAVTDYapIPNSNLFSQNTLIAELLDIiakanskvLKTMKVKEAHPA 315
                 566666677778889***********9966665555555999555555543356677765557788888888888887766666667666677777777 PP

      AAA_16 101 leeala......avpelagaeasrllellkrll.allsrderplvlvlDdl 144
                 ++++l+         el + e++  +  ++++  + ++++ +p+ ++lD l
  KHJ32754.1 316 ILASLEsnctihRLCELGAREPEFAWPFFQNFWsEITREGNPPIMICLDGL 366
                 777777888888444444444455555556666444666667799999987 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.74
      AAA_16  51 d.....ggiflrgkcdqlesaipysalaqalareellrqllde 88 
                       gg fl+++++++   +p s+ +++      ++  +de
  KHJ32754.1 401 VktvpnGGAFLAATNRSH---APVSQSLEL-----AIKRSDDE 435
                 344444788888888888...555553333.....33333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       698  (0.0389313); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 3827.87
//
Query:       KHJ32755.1  [L=472]
Description: putative molybdenum cofactor biosynthetic protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.1e-54  184.5   0.1    1.2e-53  182.0   0.0    1.9  2  ThiF          ThiF family
    1.2e-13   51.5   0.0      3e-13   50.2   0.0    1.7  1  Rhodanese     Rhodanese-like domain
  ------ inclusion threshold ------
        1.1    9.6   4.0        3.1    8.1   4.0    1.7  1  ABC_tran_CTD  ABC transporter C-terminal domain


Domain annotation for each model (and alignments):
>> ThiF  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2     0.082   4.9e+02      48      82 ..       1      35 [.       1      53 [. 0.82
   2 !  182.0   0.0     2e-57   1.2e-53       1     243 [.      63     316 ..      63     319 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.082
                EESSB--GGGGGTBTTS-GGGTTSBHHHHHHHHHH CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 48 vDnDkielsNlnRqflfreediGkpKaevaaealq 82
                +D  +i+   l R + ++e + ++ K++ a   +q
  KHJ32755.1  1 MDIANISADELKRVITATERKLQRLKVQLANVEAQ 35
                588899999*****************999975554 PP

  == domain 2  score: 182.0 bits;  conditional E-value: 2e-57
                 THHHHHH..HHHHHHHHHHTSEEEEE--SHHHHHHHHHHHHHTTTEEEEEESSB--GGGGGTBTTS-GGGTTSBHHHHHHHHHHHT-TTSEEEEEES-C CS
                 xxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF   1 ysrqlal..lgedgqekLrdskvllvGaGglGsellknLalsGvgkltlvDnDkielsNlnRqflfreediGkpKaevaaealqeinpdveveavteri 97 
                 y rq+++  +g +gq  Lr+++vl+vG+GglG++++ +La++G+gk+ lvD D +elsNl+Rq++++ + iG+ K+++a + l+++np ++  ++  ++
  KHJ32755.1  63 YGRQMVVpkIGIQGQLHLRSASVLIVGVGGLGCPAAAYLAGAGIGKIGLVDGDIVELSNLHRQIIHNNSTIGMFKVDSAYRYLKQLNPLCQYITYATPL 161
                 568988898999*************************************************************************************** PP

                 CGCCS-HHHHTT-SEEEEESSSHHHHHHHHHHHHHHT-EEEEEEEETTEEEEEEE.EE.......CCS-ECTSS-TGGS.EECCCCEEHHHHHHCTE-B CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF  98 tdetvleellesvDlVvdalDniearrlvnracvkkgiplieagtlgfegqvvvi.ip.......gktgcyeCldpsstedptekkvplctsiagnipa 188
                 t+++ +e++++ +Dl++d++D   +r+l+ ++    ++p+i+a++l+ egq+     p          +cy+C +p   + p+ ++v +c +  g   +
  KHJ32755.1 162 TPQN-AENIVSAYDLILDCTDHPISRYLISDIGLLLQKPVISASALRSEGQLLLLnWPplsvgneAGGPCYRCIFP---KSPPAESVVSC-GDGG---I 252
                 **99.79************************************************5225667777999********...***********.8888...* PP

                 -HHHHHHHHHHHHHHHHHHH..........TTBCGGGCCEEEECCTTTTEEEEECCEEEEEEC-T CS
                 xxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 189 iatttavvaglaalellkll..........sgkeklenslltqvdllesrfenvelerakkskcl 243
                 i++++++++ l+a+e+lkll          ++k ++  +++ + +  e++f++v+l+ +++++c+
  KHJ32755.1 253 IGPVVGLMGVLQAVEALKLLvggnlvnsisNKKAETKSTMFMFSANSEPQFRTVKLK-GRRKECR 316
                 ***************************99977777788888888899999***9995.4556665 PP

>> Rhodanese  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.0   4.9e-17     3e-13       3     106 ..     359     463 ..     357     464 .. 0.83

  Alignments for each domain:
  == domain 1  score: 50.2 bits;  conditional E-value: 4.9e-17
   Rhodanese   3 kelkellekgkva.llDvRppeeYekghIpgAvnvskdtlsrakkseapllelpeellel..gidnkktvvvycdgggraaaaaallkklGykn.vsvl 97 
                 +++++ l++g  + l+DvR++  ++ +++pg++nv   ++s+ +   a+   + ++l+ l   ++++ +++++c++g++++ a++llk++G+++ v+++
  KHJ32755.1 359 NQFARQLDEGVEHlLVDVREKIHFDICSLPGSINV---PISKLQSLCAQRVRDCKKLEWLpePLSPQVPIYIICRSGNDSQIATKLLKEMGLQQiVKNI 454
                 66777786666567*********************...6666666666666665555555557****************9999**************** PP

   Rhodanese  98 dGGfkawke 106
                 dGGfkaw +
  KHJ32755.1 455 DGGFKAWRK 463
                 *******76 PP

>> ABC_tran_CTD  ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   4.0   0.00052       3.1      11      67 ..       9      56 ..       7      58 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00052
  ABC_tran_CTD 11 eeleaeIeaLEeeiaeleaeladpelysdpeklaelsaeleeleaeLeelyerWeeL 67
                  +el + I a E +++ l  +la+ e         + +   +ele++Le +++rW  L
    KHJ32755.1  9 DELKRVITATERKLQRLKVQLANVE---------AQNDHNNELEQQLEVAESRWRLL 56
                  6788999999999999999999887.........44455789999999999999655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (472 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       931  (0.051927); expected 358.6 (0.02)
Passed bias filter:                      786  (0.0438396); expected 358.6 (0.02)
Passed Vit filter:                       106  (0.00591221); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 3404.71
//
Query:       KHJ32756.1  [L=199]
Description: putative atp-dependent clp protease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-19   68.9   8.1    5.3e-19   68.9   8.1    1.6  2  SLX9      Ribosome biogenesis protein SLX9


Domain annotation for each model (and alignments):
>> SLX9  Ribosome biogenesis protein SLX9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.5       0.2   3.5e+03       9      26 ..       4      26 ..       2      35 .. 0.55
   2 !   68.9   8.1     3e-23   5.3e-19       3     130 ..      39     190 ..      37     191 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.2
        SLX9  9 KrkiKheaflsKiek.....sis 26
                Kr +K+ +  +K ++     +++
  KHJ32756.1  4 KRPNKRISIRAKTNTlstmsQTN 26
                66677777777777764332222 PP

  == domain 2  score: 68.9 bits;  conditional E-value: 3e-23
        SLX9   3 klsKkdKrkiKheaflsKieksisksaskkkkkrkrrpskklvtdlesLadaLpdleeeegekkekkekeqaqqgkvkkaekslkskpgalkrkkklek 101
                 k +K+dKr+ K++ fls ie       +k + k+ rrpskklvt+l+ L daLp    +++ + ++   ++++++k ++  +slk k+g  k++ k+ek
  KHJ32756.1  39 KIKKRDKRLKKRSVFLSNIEI-----PHKIDPKKCRRPSKKLVTSLSNLLDALP----NDT-QLSEGLTNENNKNKPRS--NSLKIKLGVSKKRAKIEK 125
                 679******************.....666666666*******************....222.33444444555555555..79**************** PP

        SLX9 102 kEmerfkkvLa....................................hpsfksnpfaaLrehisn 130
                 +E  rf  +L                                     ++ ++s++faa+r++ s+
  KHJ32756.1 126 EEKTRFDMNLVkilevgqlknftddqqlnisidntvkesselgglqlSSIATSSKFAAIRAWASA 190
                 ***********************************************99***********99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1419  (0.0791455); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 1595.00
//
Query:       KHJ32757.1  [L=527]
Description: putative chromo domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-08   32.6   4.3    1.1e-07   31.7   2.3    2.5  3  Chromo    Chromo (CHRromatin Organisation MOdifier) domain
  ------ inclusion threshold ------
      0.053   13.6   0.7        1.5    8.9   0.4    2.6  2  TraY      TraY domain


Domain annotation for each model (and alignments):
>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.25   2.2e+03      19      29 ..      69      79 ..      58      83 .. 0.79
   2 ?   -3.7   0.0       1.3   1.2e+04       3      10 ..     300     307 ..     299     310 .. 0.83
   3 !   31.7   2.3   1.2e-11   1.1e-07       1      48 [.     381     426 ..     381     432 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.25
                EEEEEETTSTG CS
      Chromo 19 eYlVKWkglpy 29
                 Y V W++ p+
  KHJ32757.1 69 TYIVTWRDKPH 79
                799****9887 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.3
                 EEEEEEEE CS
      Chromo   3 VerIidhr 10 
                 Ve Ii+h+
  KHJ32757.1 300 VESIISHE 307
                 999*9996 PP

  == domain 3  score: 31.7 bits;  conditional E-value: 1.2e-11
                 EEEEEEEEEEEETTEEC...EEEEEEETTSTGGGTEEEEGGGCSSHSHHHH CS
      Chromo   1 yeVerIidhrtdkdgle...leYlVKWkglpysentWEpeenlekcfqeli 48 
                 y+Ve I d+++  d+++   l YlVKWkg p    tWEpeen++++   ++
  KHJ32757.1 381 YVVEDIKDEKWEQDRKGngvLFYLVKWKGIPS--YTWEPEENISSD---VL 426
                 79********999999999***********96..5********987...45 PP

>> TraY  TraY domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.026   2.3e+02       4      17 ..     290     303 ..     288     304 .. 0.90
   2 ?    8.9   0.4   0.00017       1.5       5      23 ..     426     444 ..     425     446 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.026
        TraY   4 kLdeetnklLeasa 17 
                 +L++ t+k+L++s+
  KHJ32757.1 290 VLSKTTEKKLVESI 303
                 69*********995 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00017
        TraY   5 LdeetnklLeasaersgRS 23 
                 L+e t ++L+ s++rs RS
  KHJ32757.1 426 LTEYTVQKLSRSKNRSRRS 444
                 89999*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (527 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1366  (0.0761894); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 3576.78
//
Query:       KHJ32758.1  [L=498]
Description: putative f-box and domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.3e-18   65.0   0.1    6.5e-17   62.1   0.1    2.0  1  Cupin_8     Cupin-like domain
    1.1e-09   38.7   0.4    8.5e-09   35.9   0.1    2.6  2  JmjC        JmjC domain, hydroxylase
    3.4e-07   30.0   0.5    1.5e-06   27.9   0.5    2.1  1  F-box       F-box domain
    0.00038   20.3   0.8    0.00086   19.2   0.8    1.7  1  F-box-like  F-box-like


Domain annotation for each model (and alignments):
>> Cupin_8  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   0.1   1.4e-20   6.5e-17      13     248 ..     198     414 ..     193     419 .. 0.75

  Alignments for each domain:
  == domain 1  score: 62.1 bits;  conditional E-value: 1.4e-20
     Cupin_8  13 kPviikgalkdwpalqkwtddeylleylkekaedvkvsvektpdgeadsf....keneelkfvkpe.eeemtfkdfldelearrdtrsepyaylqnanl 106
                 kP+i++  +kdwp++++w+     +eyl +++ +vk++ e    g++ ++     + +++  ++p     ++f + ++ + +++dt   ++ y   +++
  KHJ32758.1 198 KPFILTHHMKDWPIFKQWN-----IEYLLKHYHEVKFQAE----GVNWRLsnyiAYMKNNCDESPLyLFDKEFYEKMNLITSESDT---SSSYWTPQCF 284
                 8*****************9.....6************974....556666222233333333333214455555555555555433...3566677777 PP

     Cupin_8 107 asefpelkedsdlpfateafgkkpeavnlWlGnsasvsslHkDh..yeNlycvvrGrKkftLfpPsdap....flyeaslsptedgtvvssvdveepdl 199
                 a+++ ++  d+  +f             l +G+++s s +HkD+     + +v++G K +++fp + +      +y+++     +++v+s+++++e  l
  KHJ32758.1 285 AEDLFSVFGDERPDF-----------RWLIIGPRRSGSTYHKDPnaTSAWNAVIKGSKYWIMFPSTSSIpappGVYVSE----DESEVTSPLSIAEWLL 368
                 777777766644444...........34889999**********9999****************998751222557776....4678************ PP

     Cupin_8 200 ekfprlkdakkalevtlnaGevLylPalWfHeVkslaeeplhlavnywy 248
                     +++++  ++e    +Ge+L++P++W+H V +l  e  ++a+  ++
  KHJ32758.1 369 GFHAEARRTHGCIEGVCGEGEILHIPSGWWHLVVNL--ET-TIALTQNF 414
                 9999999998899*********************99..64.88887666 PP

>> JmjC  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.1   1.9e-12   8.5e-09       1     114 []     301     414 ..     301     414 .. 0.90
   2 ?   -2.1   0.0       1.2   5.2e+03      56      77 ..     442     464 ..     428     478 .. 0.70

  Alignments for each domain:
  == domain 1  score: 35.9 bits;  conditional E-value: 1.9e-12
                 EEEEE-TT-EEEEE--GGG-EEEEEEEEES-EEEEEE-GGGHHHHH..HHHHHHHHCCSTTG.CCTTTCEE-HHHHHHTT---EEEEE-TT-EEEE-TT CS
        JmjC   1 wlylgmpksttpwhiedqglySinylhfgapkvWyiipeekkekle..kvlskknskeqpdl.lrhkstlispkqlekegipvyrfvqkpgefVfvfpg 96 
                 wl +g+ +s   +h + ++++ +++  ++++k+W ++p+  +  +     +s+++s+ ++ l + ++   ++ +  + +   +++ v  +ge++ +++g
  KHJ32758.1 301 WLIIGPRRSGSTYHKDPNATS-AWNAVIKGSKYWIMFPSTSSIPAPpgVYVSEDESEVTSPLsIAEWLLGFHAEARRTH--GCIEGVCGEGEILHIPSG 396
                 899*****************9.9*****************999998865555556777777778888888988887777..79**************** PP

                 -EEEEEESSSEEEEEEEE CS
        JmjC  97 ayHsvfnlgfniaeavnf 114
                 ++H v+nl ++ia ++nf
  KHJ32758.1 397 WWHLVVNLETTIALTQNF 414
                 *****************9 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.2
                 CSTTG.CCTTTCEE-HHHHHHTT CS
        JmjC  56 eqpdl.lrhkstlispkqlekeg 77 
                 ++p     +k+t+++p+ l++ +
  KHJ32758.1 442 KCPYStFIEKMTKVHPDLLQSTQ 464
                 56666677788888888876654 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.5   3.3e-10   1.5e-06       3      47 ..      70     114 ..      69     115 .. 0.95

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 3.3e-10
                 HHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHHHH CS
       F-box   3 lsrLPsevlrhILerLplsdllalrrVSkgwrilidsdrlwcksi 47 
                 +  LP++++   Le+L++++ll l ++++ ++ +++ d+lw++++
  KHJ32758.1  70 FQILPEDLIASLLENLDPISLLTLGSTCTYLHAFCRWDNLWRTIF 114
                 677***************************************986 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.8   1.9e-07   0.00086       4      47 ..      73     115 ..      70     116 .. 0.94

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 1.9e-07
  F-box-like   4 LPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrrlvl 47 
                 LP++++   ++ L+p +Ll l  +C + + +++ +  LWr++++
  KHJ32758.1  73 LPEDLIASLLENLDPISLLTLGSTCTYLHAFCRWD-NLWRTIFT 115
                 9*******************************999.9*****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (498 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       471  (0.0262703); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3673.23
//
Query:       KHJ32759.1  [L=247]
Description: putative fumarylacetoacetate hydrolase domain-containing protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.7e-52  175.8   0.0    1.2e-51  175.5   0.0    1.0  1  FAA_hydrolase  Fumarylacetoacetate (FAA) hydrolase family


Domain annotation for each model (and alignments):
>> FAA_hydrolase  Fumarylacetoacetate (FAA) hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.5   0.0   6.5e-56   1.2e-51       1     210 [.      24     222 ..      24     234 .. 0.92

  Alignments for each domain:
  == domain 1  score: 175.5 bits;  conditional E-value: 6.5e-56
                    .EEEEEEE--SHHHHHTTT.-SS-EEEEEEGGGE.EETTE..EE-TT.SSSS-EE......EEEEEEEESS-B--T..--HHHHHTTEEEEEEEEE CS
  FAA_hydrolase   1 kivcdglnyaehvreagkaaeeppdrhiplepvfflkrasslvgpgd.pirrPagsekldyEvELavvigkplrev..lsveeAedaiaGytllnD 93 
                    k+vc+g+nya+hv+e++    ++p+     +p fflk++ss+  pg+ p+ rP+g++ l+yEvELa++igk+++++   + + A dai  y+l+ D
     KHJ32759.1  24 KVVCIGRNYADHVAELN---SSKPK-----QPFFFLKPPSSILLPGEgPVIRPRGVN-LHYEVELALIIGKKVKDLeeSNTQCAFDAIQSYALCID 110
                    689************96...44555.....566*********9998758******77.9************999998878999************* PP

                    EE-SBGGG---..HHHHHHTGGGEEEEEE-B--B-.STT---SS-EEEEEETTEE..EEEEEGGGTTTSHHHHHHHHHHHH-B-TT-EEEEEES.. CS
  FAA_hydrolase  94 vsaRdlqaeek.aplgwflgksfdtftpiGpwivtpdeledpedlelrlrvngee..vqdsntkdmifspaeliahlsagltLepGdliltGTpsg 186
                    ++aR++q+e+k + l+w  +k+fdtf p++  i +++ ++dp+++el lrvn+e+  +q+ nt+  +f++++++a +s+++tLe Gd+++tGTp+g
     KHJ32759.1 111 MTARNIQDEAKkKGLPWSIAKGFDTFLPMSNAI-PKSTIPDPHNIELYLRVNDEPkpRQQDNTNLFLFKIPQILASVSKVFTLEVGDIVITGTPKG 205
                    ***********7777******************.*****************9987669************************************** PP

                    .....S--EE--TT-EEEEEETTT CS
  FAA_hydrolase 187 vgaeeeslkflkdgDeveveiegl 210
                    vg        + +gD++++ i + 
     KHJ32759.1 206 VG-------SVVPGDTISAGIRSH 222
                    98.......499*****9998544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1887.78
//
Query:       KHJ32760.1  [L=528]
Description: putative pwi domain mrna processing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-31  106.4   0.1      1e-30  105.8   0.1    1.3  1  PWI       PWI domain


Domain annotation for each model (and alignments):
>> PWI  PWI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.8   0.1   5.8e-35     1e-30       1      72 []      31     102 ..      31     102 .. 0.98

  Alignments for each domain:
  == domain 1  score: 105.8 bits;  conditional E-value: 5.8e-35
         PWI   1 dvlkpWIakkitellgfeDdvvieyvlnlLeeekeldpkklqinltgfLekeaekFvkeLWelllsaqssee 72 
                 +v+k+WIa+ki+e+lg++Ddvvie+++nl+e ++++d+kk qi+ltgfL+k+++ F+keLW+l+lsaq +++
  KHJ32760.1  31 EVIKKWIASKISEILGNDDDVVIELCFNLIEGSRYPDIKKTQIQLTGFLDKDTASFCKELWKLCLSAQTNPQ 102
                 69******************************************************************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (528 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1595  (0.088962); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.06u 0.33s 00:00:01.39 Elapsed: 00:00:00.46
# Mc/sec: 3468.46
//
Query:       KHJ32761.1  [L=190]
Description: putative 4 histone acetyltransferase complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-20   71.6   0.2    6.6e-20   70.8   0.2    1.4  1  NuA4      Histone acetyltransferase subunit NuA4


Domain annotation for each model (and alignments):
>> NuA4  Histone acetyltransferase subunit NuA4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.8   0.2   3.7e-24   6.6e-20       1      78 [.      33     110 ..      33     111 .. 0.83

  Alignments for each domain:
  == domain 1  score: 70.8 bits;  conditional E-value: 3.7e-24
        NuA4   1 eLkellkkkrelekelakleeqIydkEteYleetssvGNiikGFdnylkssssssaaerrkrkvtded...riFSlSSvts 78 
                 +L el++k+re+e  la+ ee I +kE+eYleet ++GNii GFdny+k  ++  +++rr r+ +d+d   r+FS+SS+++
  KHJ32761.1  33 QLGELIQKRREIELALASQEELIAKKEQEYLEET-PIGNIIAGFDNYTK--GGIVSGRRRGREEEDRDrrlRVFSRSSISW 110
                 5889******************************.**************..333334444445555556689******997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       799  (0.0445647); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1486.92
//
Query:       KHJ32762.1  [L=103]
Description: hypothetical protein EV44_g6131 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1301  (0.072564); expected 358.6 (0.02)
Passed bias filter:                      605  (0.0337442); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.35
# Mc/sec: 872.06
//
Query:       KHJ32763.1  [L=252]
Description: hypothetical protein EV44_g1303 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1843.08
//
Query:       KHJ32764.1  [L=258]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       720  (0.0401584); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 2041.39
//
Query:       KHJ32765.1  [L=605]
Description: hypothetical protein EV44_g4597 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4656.07
//
Query:       KHJ32766.1  [L=314]
Description: putative sphingolipid long chain base-responsive protein lsp1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-73  247.3   6.0      3e-71  240.0   6.0    2.0  1  Pil1      Eisosome component PIL1
  ------ inclusion threshold ------
      0.042   13.6   2.6      0.099   12.3   2.6    1.6  1  BAR_3     BAR domain of APPL family


Domain annotation for each model (and alignments):
>> Pil1  Eisosome component PIL1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.0   6.0   3.3e-75     3e-71      14     264 ..      28     266 ..      17     267 .. 0.92

  Alignments for each domain:
  == domain 1  score: 240.0 bits;  conditional E-value: 3.3e-75
        Pil1  14 tasesqteaspksstkskrlfsl..kslrsslr.kqaaasfsPelarrLakLikseknlvraheaaarerksiakqlseWGedt.dddvsDvsDklgvl 108
                 ++++++++ ++  st+s+r+f++  +s+r  l   +  ++++Pel+++L+k+ik+ek +++ ++ +are++ +a qls WGe+t dd +  +s k+++l
  KHJ32766.1  28 DKNQKTKHIHRALSTRSNRNFNTgsTSIRYDLSlFSLRGTIQPELSKKLYKMIKTEKRMISCYDSVAREQILVASQLSDWGESTeDDTINGISSKISLL 126
                 556667777777889999988762256776664235689*******************************************998999*********** PP

        Pil1 109 lselgeledayadrldqsRatlKsirniEasvqpsRdkkekladeiaklkakepqserlvvlEqeLvraeaeslvaeaqlsnitReklkeaytaefdal 207
                 lselgele+ ya +ldqsR+ lK+irn+E+s+qpsRd+k+k+ d+i +lkak+p s++l++ Eqe +raeae+lvaeaql+ni +              
  KHJ32766.1 127 LSELGELEKLYARNLDQSRSILKTIRNTEKSIQPSRDAKSKILDDISRLKAKDPGSAKLMTSEQEYIRAEAENLVAEAQLTNIAK-------------- 211
                 **********************************************************************************975.............. PP

        Pil1 208 iEraeKlallarygkrLlellddspvtpGetrpaYdgaeatrqiladaedaLrewrl 264
                   raeK++++a++g rLl+llddspv pG++ ++++ a ++rqil+d+ed+L+ew++
  KHJ32766.1 212 --RAEKQMIIASHGFRLLKLLDDSPVLPGDKLQKFEYAGQARQILNDLEDDLKEWQP 266
                 ..79***************************************************97 PP

>> BAR_3  BAR domain of APPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.6   1.1e-05     0.099      26     158 ..      71     203 ..      69     218 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.1e-05
       BAR_3  26 elekklkkllKlckrlieagkaysaaqkqfaqsLrelkkeskgdeetdesLkkfsellqelenehtilldqaq..rsikkpLekFrkedlkevkekkkk 122
                 el+kkl k++K  kr+i++  ++ + q  +a++L++     ++d+       k+s ll+el +  + ++++++  rsi k + +  ++ ++  +++k k
  KHJ32766.1  71 ELSKKLYKMIKTEKRMISCYDSVAREQILVASQLSDWGESTEDDTING-ISSKISLLLSELGELEKLYARNLDqsRSILKTIRNT-EKSIQPSRDAKSK 167
                 799**********************************98776666544.445555555555555555555544114455555554.4456666666666 PP

       BAR_3 123 Fdkesekleaaleknaqlskkkkesele.eadnelka 158
                      ++l+a     a+l ++ +++ ++ ea+n +++
  KHJ32766.1 168 ILDDISRLKAKDPGSAKLMTS-EQEYIRaEAENLVAE 203
                 655566666666666666666.555555566665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       934  (0.0520944); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2313.02
//
Query:       KHJ32767.1  [L=184]
Description: hypothetical protein EV44_g3133 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       547  (0.0305092); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1460.98
//
Query:       KHJ32768.1  [L=139]
Description: hypothetical protein EV44_g3507 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.19s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 1110.14
//
Query:       KHJ32769.1  [L=598]
Description: putative glucocorticoid receptor-like (dna-binding) [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.6e-88  295.0   0.0    6.3e-88  294.6   0.0    1.2  1  SNF5            SNF5 / SMARCB1 / INI1
    3.9e-07   29.6   2.3    8.7e-07   28.4   2.3    1.6  1  GATA            GATA zinc finger
     0.0022   17.7   5.5      0.058   13.1   1.1    2.4  2  Rubredoxin_2    Rubredoxin metal binding domain
  ------ inclusion threshold ------
       0.27   11.0   0.1       0.27   11.0   0.1    1.8  2  zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal


Domain annotation for each model (and alignments):
>> SNF5  SNF5 / SMARCB1 / INI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.6   0.0   1.4e-91   6.3e-88       1     237 []     127     451 ..     127     451 .. 0.84

  Alignments for each domain:
  == domain 1  score: 294.6 bits;  conditional E-value: 1.4e-91
        SNF5   1 qaekpetLvPiridldidk.................................yrlrDtFlwNlhetlitpeqFaqtlveDldlpeeaavveeiskqire 66 
                 q+++p tL+Piridldi++                                 yrl+D+FlwNlhetl+t++qFaqtlv+Dldlp++ +++ eiskqir+
  KHJ32769.1 127 QTALPLTLIPIRIDLDIPAfipaaplplpqgipfskidsslplyrspemtvpYRLKDIFLWNLHETLTTTDQFAQTLVQDLDLPNRGQLACEISKQIRS 225
                 677899******************************************************************************999************ PP

        SNF5  67 qleeyagvalhel.ase.....................kkesatpaekkeseedtpka.....................................kise 106
                 qleeyagvalh+l + +                                        +                                     +   
  KHJ32769.1 226 QLEEYAGVALHPLfHPQqsfgttsapilksdassrdmsA------------------NpvpneiviplqndkigtngtsatkrleinsinekitsS--- 303
                 *************99885665555555544444433330..................244555555555555555666555666555555543331... PP

        SNF5 107 eeek.........eeke.nkddelRvlikldiqigsklltDkfEWdllsplntpEeFAkqlcadlgLsgefvtaiaHaIrEqvlkykksllesgllvag 195
                    +         +++e n+dd +R++++l+i+++++l+ DkfEW+ll+p++++E FAkq+cadlgL++e+v++iaHaI+E vl++kk+++esg l   
  KHJ32769.1 304 ---TsasaslvasDNNElNPDDMYRCIVNLSINLSNHLYSDKFEWSLLHPPGMAEIFAKQTCADLGLHREWVPVIAHAIYESVLRLKKEACESGSLLGA 399
                 ...033445566544445*****************************************************************************9996 PP

        SNF5 196 lkk.l........eagwrfdee.laeefepkleelskeelekrekerereir 237
                 + + +        eagwr+d+e la+e+epk+e+l++ee+ekre++rer+ir
  KHJ32769.1 400 YGGeIpneaahgaEAGWRYDHEhLADEWEPKVEQLTREEIEKREGDRERQIR 451
                 6655344445555*************************************98 PP

>> GATA  GATA zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   2.3   1.9e-10   8.7e-07       1      34 [.     543     578 ..     543     580 .. 0.91

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 1.9e-10
        GATA   1 CsnCgttkTplW..RrgpdgnksLCnaCGlyykkkg 34 
                 Cs+C++  T+ W  R gp+g+k+LCn+CG  y  ++
  KHJ32769.1 543 CSHCKVWGTAVWavRDGPHGQKTLCNNCGFLYERYH 578
                 *********999889**************8887776 PP

>> Rubredoxin_2  Rubredoxin metal binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   1.1   1.3e-05     0.058      12      26 ..     538     552 ..     534     553 .. 0.83
   2 !    6.4   0.2    0.0017       7.5       3      13 ..     567     577 ..     566     578 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.3e-05
  Rubredoxin_2  12 kwfGrCpsCgsWntl 26 
                   +  +rC +C+ W+t 
    KHJ32769.1 538 RSTWRCSHCKVWGTA 552
                   557**********96 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0017
  Rubredoxin_2   3 CsqCGfesakw 13 
                   C++CGf + ++
    KHJ32769.1 567 CNNCGFLYERY 577
                   ******99886 PP

>> zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   6.1e-05      0.27      32      53 ..     522     549 ..     519     550 .. 0.74
   2 ?   -3.2   0.2       1.6   7.2e+03      47      52 ..     567     572 ..     565     573 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 6.1e-05
  zinc_ribbon_10  32 nGlap......keeleevkyrCpkCgal 53 
                     nG+a+       +++e+ ++rC++C+++
      KHJ32769.1 522 NGMASyggsasLNDYERSTWRCSHCKVW 549
                     555555544437899**********987 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.6
  zinc_ribbon_10  47 CpkCga 52 
                     C +Cg+
      KHJ32769.1 567 CNNCGF 572
                     888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (598 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 4431.20
//
Query:       KHJ32770.1  [L=384]
Description: putative 26s proteasome complex ubiquitin receptor subunit rpn13 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-22   79.8   0.0    2.7e-22   79.1   0.0    1.3  1  Proteasom_Rpn13  Proteasome complex subunit Rpn13 ubiquitin r
    1.3e-08   35.0   2.1    1.2e-05   25.5   0.0    2.2  2  RPN13_C          UCH-binding domain
  ------ inclusion threshold ------
      0.024   12.6   0.6       0.05   11.5   0.7    1.4  2  Med16            Mediator complex subunit 16


Domain annotation for each model (and alignments):
>> Proteasom_Rpn13  Proteasome complex subunit Rpn13 ubiquitin receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.1   0.0   4.5e-26   2.7e-22       1      86 []      12     107 ..      12     107 .. 0.87

  Alignments for each domain:
  == domain 1  score: 79.1 bits;  conditional E-value: 4.5e-26
  Proteasom_Rpn13   1 Gkceld..ektkkvkpdprkGliylykeeeellhfkWkdrek..tgeaeddlilipgdasfkkveqc.......ktgRvyvLkfksssqrlfFW 83 
                      G ce+d  +k++kv p+ ++G++yly  ee+l+hf+W++r+k   +e + dl+++p+d++f + + +       ++gR+++Lkf+ss  r+ FW
       KHJ32770.1  12 GSCEIDqsTKPYKVVPKLTPGYVYLY-MEENLIHFCWRERSKpiNHEDNLDLVMLPTDCHFLPYQPStnepatkTNGRIFILKFSSSFMRYAFW 104
                      889999767999**************.5667***********95556689*************544445566679******************* PP

  Proteasom_Rpn13  84 lQd 86 
                      +Q+
       KHJ32770.1 105 MQS 107
                      **6 PP

>> RPN13_C  UCH-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   1.0   0.00036       2.1       1      50 [.     220     276 ..     220     294 .. 0.78
   2 !   25.5   0.0     2e-09   1.2e-05      58      94 ..     315     351 ..     307     363 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00036
     RPN13_C   1 Qsilaslqqakaaaq.epevsLsdiltpealspll..sdpevveeLashLPe....e 50 
                 Q++l+sl+ ++ +++  +++sL+++l ++ + p++   dp  +++L+s LP     +
  KHJ32770.1 220 QNFLNSLRVEQDDQSkLKSLSLHSLLHSSITIPMIntFDPVQIDKLLSQLPLaillT 276
                 89999999999888779******************43355589********866543 PP

  == domain 2  score: 25.5 bits;  conditional E-value: 2e-09
     RPN13_C  58 lretlrSPqfrqalsslsqALqsgqlgpvlsqlgLde 94 
                 lr++lrSPqf+q+l +l++A+q+g+l ++ ++l+++ 
  KHJ32770.1 315 LRRVLRSPQFNQSLGTLTTAIQKGGLPNIAEALQIKV 351
                 899**************************99999875 PP

>> Med16  Mediator complex subunit 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0      0.28   1.7e+03     267     293 ..      32      58 ..      19      63 .. 0.78
   2 ?   11.5   0.7   8.3e-06      0.05     382     492 ..     214     337 ..     206     342 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 0.28
       Med16 267 lvvaiyydDgsievvdrnslkvvneti 293
                  +v++y++ + i++  r+  k+ n+ +
  KHJ32770.1  32 GYVYLYMEENLIHFCWRERSKPINHED 58 
                 589999999999999999999987764 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 8.3e-06
       Med16 382 DilllikteilrveklsekrtrnFiesviselhvsinftlda..ekesldkLlsspalqklLllqlelGpaqk.......nnevvsdiawiiLnLrsas 471
                 D +++++  ++ ++  ++++++    s+ s+lh+si++ + +  +  ++dkLls+ +l  lL+ q +    ++       +ne  s++a   ++++ + 
  KHJ32770.1 214 DTASIVQNFLNSLRVEQDDQSKLKSLSLHSLLHSSITIPMINtfDPVQIDKLLSQLPLAILLTAQEHDERLENlgkntdeANEARSSMAIKAMSVECKR 312
                 5666666666654444444443223378899999999988763556689*************7777655555566666799****************** PP

       Med16 472 falefvlrsikrqisk....psitr 492
                 ++l +vlrs ++++s     ++i++
  KHJ32770.1 313 LLLRRVLRSPQFNQSLgtltTAIQK 337
                 ***********99987544335555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2741.80
//
Query:       KHJ32771.1  [L=204]
Description: putative 60s ribosomal protein l6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.3e-40  136.7   0.4    6.4e-40  136.1   0.0    1.4  2  Ribosomal_L6e  Ribosomal protein L6e


Domain annotation for each model (and alignments):
>> Ribosomal_L6e  Ribosomal protein L6e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1      0.47   8.5e+03      66      82 ..      25      41 ..       8      51 .. 0.49
   2 !  136.1   0.0   3.6e-44   6.4e-40       1     111 []      93     204 .]      93     204 .] 0.96

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.47
  Ribosomal_L6e 66 seerkadqkavDkalla 82
                   s++ ++    vD+a  +
     KHJ32771.1 25 SQKAQKWYPVVDDAKPK 41
                   33333333344444333 PP

  == domain 2  score: 136.1 bits;  conditional E-value: 3.6e-44
  Ribosomal_L6e   1 lNgvPLrRvnqryVIatstkvdlsgvd.ekipeklndeyFkkekkkkkkkkkeeelf..eekkekkelseerkadqkavDkallaaikkekllkkY 93 
                    +NgvPLrRvn+ryVIats k+dl+g d +ki+e  +++yF+++k++kk  + ee++f   ek ekk +s++r+adqkavDka+la+ikk+++l++Y
     KHJ32771.1  93 VNGVPLRRVNARYVIATSYKIDLTGTDeSKINEIATEKYFARDKSEKK--NGEESFFkgGEKPEKKLPSSSRAADQKAVDKAILANIKKVPFLTSY 186
                    7******************************************76666..599****9989999999***************************** PP

  Ribosomal_L6e  94 LkskFsLrkgdyphelkF 111
                    L+s+FsLrkgd+phe+ +
     KHJ32771.1 187 LASTFSLRKGDRPHEMAW 204
                    ****************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1490.07
//
Query:       KHJ32772.1  [L=357]
Description: putative cell differentiation protein rcd1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   6.1e-126  419.0   4.2   7.3e-126  418.7   4.2    1.1  1  Rcd1          Cell differentiation family, Rcd1-like
  ------ inclusion threshold ------
      0.032   13.5   3.1        1.1    8.5   0.1    2.9  3  V-ATPase_H_N  V-ATPase subunit H


Domain annotation for each model (and alignments):
>> Rcd1  Cell differentiation family, Rcd1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  418.7   4.2  8.2e-130  7.3e-126       2     259 .]      86     343 ..      85     343 .. 0.99

  Alignments for each domain:
  == domain 1  score: 418.7 bits;  conditional E-value: 8.2e-130
        Rcd1   2 ildlakpekreeaLleLskkresvedlallLwesfgtvaaLLqeivsiYpllspptltaaesnrvcnaLallqcvashpetrklflkakiplyLypfLn 100
                 i dl ++++re aLleLskkre+v++lal+Lw+sfg+++ LLqei+s+Y ll+p++ltaa+snrvcnaLallqcvash+etr lfl+a+ipl+LypfLn
  KHJ32772.1  86 IADLLDEDTREAALLELSKKREQVPELALILWHSFGVMTSLLQEIISVYTLLNPSQLTAAASNRVCNALALLQCVASHNETRALFLNAHIPLFLYPFLN 184
                 89************************************************************************************************* PP

        Rcd1 101 ttsksrefEylRltsLgvigaLvktddkevikflldteivplclrimesGselsktvAtfIlqkiLlddeGLeYicqtaerfsavaevLnkmvvsltee 199
                 ttsksr+fEylRltsLgvigaLvk+d+++vi+fll+tei+plclrime+GselsktvA+fI+qkiLldd+GL+Yic+t+erf+av +vL++mv++l+e+
  KHJ32772.1 185 TTSKSRPFEYLRLTSLGVIGALVKNDSSDVINFLLTTEIIPLCLRIMETGSELSKTVAIFIVQKILLDDHGLNYICATYERFYAVGTVLSNMVSQLVEQ 283
                 *************************************************************************************************** PP

        Rcd1 200 pssrllkhvircYlrLsdnprareaLkkclpelLkdktfkellkedpetkkwlkqLlenl 259
                 +++rllkhv+rc+lrLsdn+rareaL++clpe L+d tf+++l++d +tk++l qLl nl
  KHJ32772.1 284 QTARLLKHVVRCFLRLSDNARAREALRQCLPEPLRDATFSSVLRDDAATKRCLAQLLINL 343
                 *********************************************************886 PP

>> V-ATPase_H_N  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1   0.00012       1.1      74     104 ..      80     109 ..      22     126 .. 0.77
   2 ?    4.6   0.2    0.0018        16     154     203 ..     137     186 ..     112     236 .. 0.78
   3 ?   -0.8   0.0      0.08   7.1e+02      21      39 ..     276     294 ..     258     348 .. 0.60

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00012
  V-ATPase_H_N  74 qyiLvlidDllsedksrvelflslakkeeqd 104
                   +  Lv+i+Dll+ed +r++++l+l+kk+eq 
    KHJ32772.1  80 RRTLVFIADLLDED-TREAALLELSKKREQV 109
                   5579*********8.5888888999988885 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0018
  V-ATPase_H_N 154 Lss.qlssstnevieiavrllqellrtkeyRelfveadgvstlisilrstv 203
                   L+  ql++  ++ +  a+ llq +++++e R lf++a++  +l   l+ t+
    KHJ32772.1 137 LNPsQLTAAASNRVCNALALLQCVASHNETRALFLNAHIPLFLYPFLN-TT 186
                   333555555555668899******************999999999883.32 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.08
  V-ATPase_H_N  21 vrsqliseedlkliksldk 39 
                   + sql+++++++l+k++  
    KHJ32772.1 276 MVSQLVEQQTARLLKHVVR 294
                   3334444444444444332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1175  (0.0655363); expected 358.6 (0.02)
Passed bias filter:                      593  (0.0330749); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2494.04
//
Query:       KHJ32773.1  [L=706]
Description: putative peptidase family m49 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.4e-239  796.1   0.0   1.6e-239  795.9   0.0    1.0  1  Peptidase_M49  Peptidase family M49


Domain annotation for each model (and alignments):
>> Peptidase_M49  Peptidase family M49
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  795.9   0.0  8.9e-244  1.6e-239       1     551 []     137     705 ..     137     705 .. 0.98

  Alignments for each domain:
  == domain 1  score: 795.9 bits;  conditional E-value: 8.9e-244
                    HHHHHHTTTT---T.TTTBBS-GGGT-B-TTEEES..--HHHHHHHHHTHHHHT---TTEEEEEEETTEEEEEEE-S........---TTTS--SE CS
  Peptidase_M49   1 lyekvkeaiyslep.kkllLglpskghvstYYssna.itkeeieavqkllekkkiepentrvvktsekeyeilvASa........keekeeepeek 86 
                    ly++++  i+s+++   + Lg+ ++ghv+tYY++++ i+k++i+av+++le k++ +entr++k+ ++++++l+ASa        ++ ++e+  e 
     KHJ32773.1 137 LYNATNGGIFSHNNeGLMYLGYLDDGHVTTYYPNSKdISKSDISAVSEFLEMKGLLMENTRLRKNLDGNFDLLIASAtttipaegSDISKETVFEL 232
                    58899999***9997899*****************99********************************************998867777788889 PP

                    EE-T.TS-EEEEEEEETHHHHHHHHHHHHHHHTT-SSHHHHHHHHHHHHHHHH--HHHHHHHHHHHHTS-S-SEEEEEEEEE-SSSTTS-S-EEEE CS
  Peptidase_M49  87 ekeelegkkvkleyGdyseelkkiveelekAkkyaanetqkkmlekYiesFetGsleahkesqrlWvkDkgPvvEtniGFietYrdPagvrgefeg 182
                    ++ +l+g++++l yGd+s+e++ i+++ +kA++++ane+qkkm  +Y++sFetGsl+a+k++qr+W++DkgP+vE+niGFietYrdP+g+rge+eg
     KHJ32773.1 233 DTGSLKGRRLNLIYGDHSREMAIIANYHRKAAEVTANENQKKMQLEYAKSFETGSLQAFKNAQRFWIRDKGPTVESNIGFIETYRDPHGIRGEWEG 328
                    99999******************************************************************************************* PP

                    EEEE--HHHHHHHHHHHHTHHHHHHHSSS-GGGS-SS-------EEEEEEEESS---SEEEE---HHHHHHT--EEEEEHHHHHHHHH--S-TTB- CS
  Peptidase_M49 183 fvaivnkersakfekLvekaeklikkLPwakefEkdkflkPdFtslevltfagsgipaGinipnyddirqneGFKNvslgnvlsakakkekitfis 278
                    fva+vn er+++f++Lv++ae++i+kLPw+k+fEkd+fl+PdFtslevl+fagsgipaGinipnyddirq+eGFKNvslgnvlsaka++eki+fi+
     KHJ32773.1 329 FVAMVNLERTRAFGSLVSAAESMIPKLPWSKDFEKDQFLSPDFTSLEVLSFAGSGIPAGINIPNYDDIRQTEGFKNVSLGNVLSAKASNEKIPFIA 424
                    ************************************************************************************************ PP

                    TTTHHHHHHHHHHHHHHHHHHHHHHHHH-----BEETTE.ESS-SSS--B.-TTSSB----B-TT--HHHHHGGGHHHHHHHHHHHHHHHHTT-HH CS
  Peptidase_M49 279 eedqelykklkeeafevqvglHELlGHGsGkLlqetedgklnfdkenvpn.pltgkpitswYkpgetwdsvfgelassyeECRAelvalyLvleke 373
                    e+d ++y+k+++ afevqvg+HELlGHG+GkLlqet++g++nf++e++p+ p+t+kpi+ +Ykpg+tw+svfg++a+syeECRAe+va+ L+++ e
     KHJ32773.1 425 EADLTIYQKYRDVAFEVQVGIHELLGHGTGKLLQETKPGNYNFNIESPPIsPITNKPIKIYYKPGQTWGSVFGSIAASYEECRAECVAMALSCDFE 520
                    ************************************************************************************************ PP

                    HHHHTT--S.....HHHHHHHHHHHHHHHHHHHHHGGGGB-TTT--BS-HHHHHHHHHHHHHHHSSSTTSEEEEE-TTS.S-EEEEE-GGGTTTHH CS
  Peptidase_M49 374 vleifgyee.....keeaedviyvnylsmaragllalefydpeskkwgqaHmqArfailkvlleagekglvkleetkdedgdltvkldrskietvg 464
                    +l+ifg+ +     + e  dv+y++ylsmarag+++le++dp+skkwgqaH+qArf+ilk++l+a + +++kl+++k++ +dltv+ldr+ki tvg
     KHJ32773.1 521 ILKIFGFGDgkldmDGEPGDVLYAAYLSMARAGVASLELWDPKSKKWGQAHSQARFSILKCFLNAPD-DFCKLDYKKEDLSDLTVRLDRNKILTVG 615
                    ********99998889999********************************************7776.*********9999*************** PP

                    HHHHHHHHHHHHHHHHTT-HHHHHHHHHHHT---HHH..HTTHHHHHHT-----EEE--EEEE-.TTS-EEEE---SSHHHHHHHHHHHH CS
  Peptidase_M49 465 keaigkfLlkLqvykstadveagkklyeelsevdeef..lklrdivlakkkprkvfvqantvle.edgkvelkeyeetlegviqSfvere 551
                    ++a++++L+kL+vyk+tad+eag+kly ++++v+++f  +k+r+ vl++k+ rk+fvqant+ + ++gk++l+eye+tleg+i+S++er+
     KHJ32773.1 616 RKAVEDYLQKLHVYKCTADIEAGSKLYADMTNVEPDFwgTKIRNEVLRNKQSRKIFVQANTIQDpTTGKIKLVEYEPTLEGMIKSYAERN 705
                    ***********************************99999***********************9999*********************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (706 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       439  (0.0244855); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 4845.42
//
Query:       KHJ32774.1  [L=309]
Description: putative short-chain dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.6e-59  199.5   0.1    6.4e-59  199.3   0.1    1.0  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
    1.8e-41  141.8   0.1    2.5e-41  141.3   0.1    1.1  1  adh_short        short chain dehydrogenase
    1.1e-07   32.0   0.7    1.7e-07   31.4   0.7    1.2  1  KR               KR domain
     0.0066   16.4   0.1      0.012   15.5   0.1    1.4  1  3HCDH_N          3-hydroxyacyl-CoA dehydrogenase, NAD binding
  ------ inclusion threshold ------
      0.022   13.9   0.0      0.037   13.2   0.0    1.3  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
      0.074   12.8   0.1          7    6.4   0.0    2.2  2  ChuX_HutX        Haem utilisation ChuX/HutX


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.3   0.1   2.2e-62   6.4e-59       1     234 []      33     276 ..      33     276 .. 0.93

  Alignments for each domain:
  == domain 1  score: 199.3 bits;  conditional E-value: 2.2e-62
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGH.HHHHHHHHHHTTSE..E..EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-H CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneea.kkrveelaeelgae..v..lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsr 92 
                   Gaa gIG ++  ++a+eGa+v+l d++  a +k+ ++l + ++++  v    cDV++e++v+alv++v +++g++Di++nnagi+++ ++++++t++
    KHJ32774.1  33 GAAGGIGLETCILFAKEGANVLLGDISAPAlEKAYAKLIQVVPSArkVetKLCDVSKEADVKALVDQV-DSWGGVDIMFNNAGIMHANDADAIDTPE 128
                   9*****************************9*********999665667799***************6.68************************** PP

                   HHHHHHHHHHTHHHHHHHHHHHHHCTSC....CEEEEEEEGGGTSBSTTTT.HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTT CS
  adh_short_C2  93 eefdraldvnlyslfllakaalplmkeg....gsivnlssvgaervvpnyn.aygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikg 184
                   + +d ++++n+++++  +k+a+  ++++    gsi+n++sv a ++ +  + ay+a+K+a+ a+tr lA   +++g R Na +p p++T++ ++  g
    KHJ32774.1 129 KIWDLTQAINVKGVWFGCKHAVLSLRKHhktnGSIINTASVVALVGSATPQlAYTASKGAVLAMTRELAIVHAREGFRFNALCPAPLNTPLLQDWLG 225
                   *********************99444433677**************999999***************************************998888 PP

                   HHH.HHHHHHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTGG CS
  adh_short_C2 185 fde.lleelearaplgrlgtpeevaeaalfLasdeasyitGqtlvvDgGlt 234
                    d+  + + e + p gr+g++ e a+a++fLasdeas+i+Gq++ vDgG+t
    KHJ32774.1 226 VDQpKRMRREIHFPSGRFGEAIEQAHAVVFLASDEASFINGQDFLVDGGMT 276
                   6552555666789************************************98 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.3   0.1   8.2e-45   2.5e-41       1     189 [.      27     222 ..      27     225 .. 0.93

  Alignments for each domain:
  == domain 1  score: 141.3 bits;  conditional E-value: 8.2e-45
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT...TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---S..S--SSGG CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee...gakalaiqvDvtdreevealvekavkklgkldvLvnNAGi..tgsgpfs 94 
                 k ++vtGa++GIG++++  +akeGa+v++ d+s+ +le+++++l +    ++k+ +  +Dv+++++v+alv+++ + +g++d++ nNAGi  ++++++ 
  KHJ32774.1  27 KNAIVTGAAGGIGLETCILFAKEGANVLLGDISAPALEKAYAKLIQVvpsARKVETKLCDVSKEADVKALVDQV-DSWGGVDIMFNNAGImhANDADAI 124
                 789****************************************9999998999********************9.99*************765666666 PP

                 GCSHHHHHHHHHHHTHHHHHHHHHHHHHHH..HCTTEEEEEEEEGGGTSB-TT.BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHH CS
   adh_short  95 elseeewervievNltgvflltravlpaml..kqssGrIvnvsSvagkvpvag.vaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmake 189
                 ++ e+ w+ + ++N++gv   +++++  +    + +G+I+n++Sv+++v++a  + aY+AsK+av ++tr+la  +a++g r na++P++++T++ ++
  KHJ32774.1 125 DTPEKIWDLTQAINVKGVWFGCKHAVLSLRkhHKTNGSIINTASVVALVGSATpQLAYTASKGAVLAMTRELAIVHAREGFRFNALCPAPLNTPLLQD 222
                 667777****************99999988778899************99986488**************************************9876 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.7   5.6e-11   1.7e-07       4     152 ..      30     185 ..      28     199 .. 0.74

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 5.6e-11
                 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT--. CS
          KR   4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleemt. 101
                 ++tG++Gg+Gle++   a++ga+ l+    sa+a e++ a++ ++  +  +ve+  +Dvs++++v+al+++++ + + +   ++ Ag+++ +  +  + 
  KHJ32774.1  30 IVTGAAGGIGLETCILFAKEGANVLLGDI-SAPALEKAYAKLIQVVPSARKVETKLCDVSKEADVKALVDQVD-SWGGVDIMFNNAGIMHANDADAIDt 126
                 89*******************98665433.34566666667777777899**********************8.55699*********99777776641 PP

                 .HHHHHHHHTTTTHHHHH..HHHHTTT....S--SEEEEEEEHHHHH--TT.-HHHHHH CS
          KR 102 .aedleqvlapKvkGawn..Lhelled....esldffvlfSSiagllgsag.qanYaaa 152
                  ++ ++   a  vkG+w    h +l+     ++   ++ ++S+ +l+gsa+ q +Y+a 
  KHJ32774.1 127 pEKIWDLTQAINVKGVWFgcKHAVLSLrkhhKTNGSIINTASVVALVGSATpQLAYTAS 185
                 14446666666888888432222222233446777888889999988887548888876 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   3.9e-06     0.012       4      62 ..      31      95 ..      28     115 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 3.9e-06
                EE--.SCCHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHHH..HHHCCTTTTSS-...HHHHCC CS
     3HCDH_N  4 viGa.GtmGagiaavfasagleVvlvdiseealekalekiek..sleklvekgklk...eeevea 62
                v Ga G +G +   +fa++g +V l dis+ aleka +k+ +    ++ ve + ++   e++v+a
  KHJ32774.1 31 VTGAaGGIGLETCILFAKEGANVLLGDISAPALEKAYAKLIQvvPSARKVETKLCDvskEADVKA 95
                56655**********************************99933233334444444323333333 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.2e-05     0.037       2      86 ..      30     114 ..      29     126 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.2e-05
                      EEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT......T-SEEEE--- CS
  Polysacc_synt_2   2 lvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleel....kvdvvfhaAA 86 
                      +vtGa+G iG e +  ++k+  ++++l + +  +l +   +l + + + +   ++ + ++dv +++ ++ +++++    +vd++f+ A 
       KHJ32774.1  30 IVTGAAGGIGLETCILFAKE-GANVLLGDISAPALEKAYAKLIQVVPSAR---KVETKLCDVSKEADVKALVDQVdswgGVDIMFNNAG 114
                      69************877766.567999**************988887643...34477******9999999987622234677776665 PP

>> ChuX_HutX  Haem utilisation ChuX/HutX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0    0.0023         7      24      55 ..      89     120 ..      67     139 .. 0.80
   2 ?    4.1   0.0     0.013        37      17      57 ..     166     205 ..     154     253 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0023
                 EGGGHHHHHHHHTTS-EEEEEEEESSEEEEEE CS
   ChuX_HutX  24 dgedfeallealeelgevmalvrnegavhEkk 55 
                 +  d++al++++ ++g v ++ +n+g++h  +
  KHJ32774.1  89 KEADVKALVDQVDSWGGVDIMFNNAGIMHAND 120
                 34499*********************999765 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.013
                 TTCEEEEEGGGHHHHHHHHTTS-EEEEEEEESSEEEEEEEE CS
   ChuX_HutX  17 edeavrldgedfeallealeelgevmalvrnegavhEkkGk 57 
                 ++++v l g ++   l+  ++ g v a++r  ++vh ++G 
  KHJ32774.1 166 TASVVALVG-SATPQLAYTASKGAVLAMTRELAIVHAREGF 205
                 556888888.566667778889**************99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       385  (0.0214736); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2233.86
//
Query:       KHJ32775.1  [L=410]
Description: hypothetical protein EV44_g1853 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-10   40.2  15.5    5.2e-10   40.2  15.5    2.8  3  Iwr1      Transcription factor Iwr1


Domain annotation for each model (and alignments):
>> Iwr1  Transcription factor Iwr1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1      0.67   1.2e+04      31      40 ..     213     222 ..     192     241 .. 0.53
   2 !   40.2  15.5   2.9e-14   5.2e-10       1      74 []     281     349 ..     281     349 .. 0.87
   3 ?   -6.8   6.6         1   1.8e+04      36      36 ..     385     385 ..     353     410 .] 0.41

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.67
        Iwr1  31 ieeedeelld 40 
                 +e+e+e   d
  KHJ32775.1 213 VESEKERNSD 222
                 3333333332 PP

  == domain 2  score: 40.2 bits;  conditional E-value: 2.9e-14
        Iwr1   1 ddYVyDvYvreeeeeeseeeetekdigvlvieeedeelldafaeddedsdeeededdeDsNaEdnyrnDYPdeE 74 
                 +d+V + Y+r     e+++ e++++ g+lv++++ e  +++f++dd++s  ee+e+deD+NaE++y++DYPdeE
  KHJ32775.1 281 EDWVVEKYFRV--PLEDTQFENHDNHGYLVLDSQAE--IEEFFQDDSNSV-EENEEDEDENAENHYTADYPDEE 349
                 59******996..4567788899999*******999..346999888876.788*******************9 PP

  == domain 3  score: -6.8 bits;  conditional E-value: 1
        Iwr1  36 e 36 
                 +
  KHJ32775.1 385 K 385
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1079  (0.0601818); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2780.72
//
Query:       KHJ32776.1  [L=302]
Description: putative histidinol phosphate phosphatase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-12   46.7   0.4    1.8e-11   44.7   0.4    1.9  1  PHP       PHP domain


Domain annotation for each model (and alignments):
>> PHP  PHP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   0.4   9.8e-16   1.8e-11       2     166 ..       5     215 ..       4     216 .. 0.63

  Alignments for each domain:
  == domain 1  score: 44.7 bits;  conditional E-value: 9.8e-16
                 EEE-.-CCC.--.S-H..HHHHHHHHHCT-SEEEEEEEEBTT........................HHHHHHHHHHHHTTTTSEEEEEEE......... CS
                 xxxx.xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
         PHP   2 lHvH.teys.lldgalsieelvkkakelglkaiaiTDhgnlf........................gyvefykaakkkykagikpiiGleayvaddse. 73 
                 +H+H ++++ +  +  s+ee +++a+ +g++ +a+T+h++++                        +y+ ++ ++++kyk++ik++iG+e+  ++ s  
  KHJ32776.1   5 MHSHsGQFCpGH-AKDSLEECINAAILKGFQLFALTEHMPRDshqdlypeeilaednvsklhsrhsDYLAEALNLREKYKDQIKILIGFECEWIRASYg 102
                 8***99***944.44455************************************************************************877776644 PP

                 ........................................E....EHHHH............HHHHHHHHH..........HHHHHH..........S. CS
                 ..............................xxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxx..........xx RF
         PHP  74 ..............................kerpshltllaknqeGyknl............lkllskaylegfyrkpridkellek..........hs 120
                                               +                                  l+++y+          ++++++          h 
  KHJ32776.1 103 plikqlaadpaidyfigsvhhvheipidydR------------------SfyfqarekaggtDARLFEDYF----------DAQYQMlievqprvigH- 172
                 4444444444444444444444444433221..................0222222222222333444444..........33333322233333333. PP

                 .................TTGG...............HHHHHHHHHHHHHHHC.T-EEEEEG CS
                 xxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxx RF
         PHP 121 egLivlsgclkGevfealdli...............eveekaeealeelakifgdyiEint 166
                  +L                 i               +v+  + ++l+ + ++ + ++E+n+
  KHJ32776.1 173 FDL-----------------IrllsdrrdlsltdleDVWTRILRNLRVILEK-DALLEVNS 215
                 122.................23333344444444446666666666666666.77777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2282.73
//
Query:       KHJ32777.1  [L=130]
Description: hypothetical protein EV44_g0999 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.15   12.8   2.6       0.23   12.2   2.6    1.5  1  Complex1_LYR_2  Complex1_LYR-like


Domain annotation for each model (and alignments):
>> Complex1_LYR_2  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   2.6   1.3e-05      0.23       2      60 ..      14      74 ..      13     126 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.3e-05
  Complex1_LYR_2  2 lsLYrrllrelrelppelrslgdayvraefrrhkhlknpeeia.....lflknqreYaellery 60
                    ++LY+ llr ++ ++   r + ++ +r++fr  ++++n   i+     +fl     Y+  +e++
      KHJ32777.1 14 RHLYKGLLRVVQYSK-PARYFARDELRNAFRH-EDISNFDSIKiartiEFLELATKYKS-IEHQ 74
                    78*********8664.446678999*******.66766666665588888888888887.6666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       966  (0.0538792); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 1068.08
//
Query:       KHJ32778.1  [L=834]
Description: putative som1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.17   11.9   0.4       0.29   11.2   0.4    1.4  1  LisH         LisH


Domain annotation for each model (and alignments):
>> LisH  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.4   1.6e-05      0.29       2      25 ..      41      64 ..      40      66 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 1.6e-05
                HHHHHHHHHHHHCT-HHHHHHHHH CS
        LisH  2 eLNrLIydYLvkeGyeetAeaFek 25
                +LN +Iy+Y++ + + e A+a+++
  KHJ32778.1 41 QLNTYIYEYFLRNSMYECAKALLE 64
                69******************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (834 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      4965  (0.276926); expected 358.6 (0.02)
Passed bias filter:                     1267  (0.0706676); expected 358.6 (0.02)
Passed Vit filter:                       527  (0.0293937); expected 17.9 (0.001)
Passed Fwd filter:                       158  (0.00881254); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 2.35u 0.39s 00:00:02.74 Elapsed: 00:00:00.63
# Mc/sec: 4015.36
//
Query:       KHJ32779.1  [L=419]
Description: putative e set [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-09   36.2   0.1      2e-07   31.2   0.0    2.9  3  Arrestin_N  Arrestin (or S-antigen), N-terminal domain
  ------ inclusion threshold ------
      0.013   14.9   1.3      0.056   12.8   0.2    2.1  2  Bul1_C      Bul1 C terminus


Domain annotation for each model (and alignments):
>> Arrestin_N  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.0   2.2e-11     2e-07       2     104 ..       4     109 ..       3     112 .. 0.77
   2 ?    0.9   0.0     0.048   4.3e+02     104     124 ..     141     163 ..     136     177 .. 0.78
   3 ?   -1.1   0.0       0.2   1.7e+03      98     119 ..     324     345 ..     323     350 .. 0.77

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 2.2e-11
                 EEEES-SEEEEETT--EEEEEEE-CCCCTT.CEEEEEEEEEEEESSSSTTTT......CCCEEEEEEEEEEEEESTSSSSS.SSSSHHHHHHHH-TTEE CS
  Arrestin_N   2 tieldkrdevyhpgetvdGkvlleteelkkarkvkielsgkartgweeseva......gktfrkdltlkkkqeyleteksllkskkdsqekLpkGehaf 94 
                 +i+ld +  +    + v+G+v l  ++++k+  ++i+l+g+ r +   s+++       + ++++  +++++ ++e +  l+        kL++G+h+f
  KHJ32779.1   4 SIDLDDPYSIRTNHDIVSGHVNLYVKTAIKVFTIFIKLKGESRSQIVPSSNSnaargrPVIESHKILYQSQKLFPEDRLGLFLH---PPRKLKAGRHKF 99 
                 68889888888888*******************************999998877777433333333344444455555544444...7899******** PP

                 EEEE---TTS CS
  Arrestin_N  95 pFsfelPknl 104
                  F+f++P + 
  KHJ32779.1 100 KFNFQIPLET 109
                 *******876 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.048
                 S--SECSGEE..EEEEEEEEEEE CS
  Arrestin_N 104 lpsSfeGkag..gvrYevkvtld 124
                 lp+S+ G  g  +++Y++kvt+ 
  KHJ32779.1 141 LPPSLIGLPGlaEINYYIKVTVR 163
                 7999988877558*******997 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.2
                 E---TTS--SECSGEEEEEEEE CS
  Arrestin_N  98 felPknlpsSfeGkaggvrYev 119
                 +++P+n+ +Sf+    +  Ye+
  KHJ32779.1 324 LQIPSNIGPSFQTCNISRSYEL 345
                 69*********87766666665 PP

>> Bul1_C  Bul1 C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1     0.036   3.2e+02      61      83 ..     199     221 ..     193     227 .. 0.82
   2 ?   12.8   0.2   6.2e-06     0.056     212     254 ..     309     351 ..     254     364 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.036
      Bul1_C  61 siPiklnselllnkeklkeikkt 83 
                  iP+k++ +++ n++ l+++++ 
  KHJ32779.1 199 RIPFKFQEKIISNTKDLNKSERE 221
                 69************999988765 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 6.2e-06
      Bul1_C 212 eleyerevnvnLelnedlketlvPsFesClcsRlYcvrvnikf 254
                 +++ e  ++ nL +  ++   + PsF++C +sR Y + + + +
  KHJ32779.1 309 NENTECFISQNLWCHLQIPSNIGPSFQTCNISRSYELDIRVGL 351
                 455566677899999999999**************86555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.18s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 3394.50
//
Query:       KHJ32780.1  [L=73]
Description: hypothetical protein EV44_g3861 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       160  (0.00892409); expected 358.6 (0.02)
Passed bias filter:                      150  (0.00836633); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.22s 00:00:00.56 Elapsed: 00:00:00.37
# Mc/sec: 590.32
//
Query:       KHJ32781.1  [L=340]
Description: putative elongation of fatty acids protein 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-62  211.4  19.9    1.8e-62  211.1  19.9    1.0  1  ELO       GNS1/SUR4 family


Domain annotation for each model (and alignments):
>> ELO  GNS1/SUR4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  211.1  19.9     1e-66   1.8e-62       3     248 ..      52     293 ..      50     295 .. 0.93

  Alignments for each domain:
  == domain 1  score: 211.1 bits;  conditional E-value: 1e-66
         ELO   3 lsspkvpiliallYlllvllgpklmknrkpfklkalvilhnlflavlSavgfvgmvkallevlkkkglvdllckddssdegrlrngllaflvllfylsK 101
                 + s+k +++++++Y++++l g+++m++r++++l+ ++ +hnlfl++lS v+++++v++++ ++ ++g++ ++c    ++ g ++ +l+++++l + ++K
  KHJ32781.1  52 MASVKQTFTAIIAYYIIILGGREFMRSRPAIQLNGIFKVHNLFLTLLSGVLLFMFVEQIVPTIYEHGVFFAIC----DTRGGWTPQLVILYYLNY-ITK 145
                 789999*********************************************************99********....677888888888888777.*** PP

         ELO 102 fvEllDTvflvlrkkqvsfLhvYHHatvmllmwaglrfatssgivfivllNsfvHaimYtYYflsalgakklvvpwkrliTslQilQfvvgllaavyll 200
                 +vEllDTvflvl+kk+++fLh+YHH +++ll++ +l  +t++++v i  lN++vH+imY+YYf+sa g++   ++wk++iT+lQi+Qf++ +++++++ 
  KHJ32781.1 146 YVELLDTVFLVLKKKPLTFLHCYHHGATALLCFSQLLGVTTVSWVPI-SLNLTVHVIMYWYYFQSARGIR---IWWKEWITRLQIMQFIIDIAFIYFAA 240
                 ***************************************77777777.*****************77666...7************************* PP

         ELO 201 vsytlkk........vgCdtsqtpkaairlnllyllslllLFlnffiksylkkkkk 248
                 ++y++++        + C+ +     a+  ++++++s+l+LF++f+i +y k++ k
  KHJ32781.1 241 YNYFTSAhfpslphyGACAGE---DIAATSGICIITSYLALFVSFYIATYSKTSGK 293
                 **999999******9999777...889***********************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      243  (0.0135535); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2655.56
//
Query:       KHJ32782.1  [L=297]
Description: putative inositol monophosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-63  214.1   0.0    3.1e-63  213.8   0.0    1.0  1  Inositol_P  Inositol monophosphatase family
  ------ inclusion threshold ------
       0.11   12.2   0.1       0.22   11.3   0.1    1.4  1  DUF1134     Protein of unknown function (DUF1134)


Domain annotation for each model (and alignments):
>> Inositol_P  Inositol monophosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.8   0.0   3.5e-67   3.1e-63       8     266 ..      13     283 ..       6     288 .. 0.86

  Alignments for each domain:
  == domain 1  score: 213.8 bits;  conditional E-value: 3.5e-67
                 HHHHHHHHHHHHHHHHTTTSEEEESTTTCCHHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEHHCHHHHCCCT.SSSSSEEEEEEEEETHHHHHHT-SG- CS
  Inositol_P   8 aavelaakagevlreefsenelvieekskegeedlvtaadeaveelilealaekfpshkilgeetlakgekseltedgltwivDPiDGTknFvrgipqv 106
                 + v++a +ag ++  e +  +  ++ k+  +++d+vt++d+ave+l+ ++l   +p+ +++geet+ +g+  +lt++ +t+ivDPiDGT++Fv+ +p +
  KHJ32782.1  13 VMVSVAYEAGSIMLLERP-SQSESDIKK--NSADIVTETDKAVEKLVSSKLLSAYPDFQFIGEETYYSGQ--KLTDK-PTFIVDPIDGTTSFVHNFPAF 105
                 567888899999999988.666666555..89**************************************..99999.********************* PP

                 EEEEEEEETTEEEEEEEEETTTTEEECEETTTEEEETC......EEEEECTTS..EGGGTEEEEEESSSSSSHHHHCHHHHHHHCCCCCH......... CS
  Inositol_P 107 aVsigllvegkpvlGviaqPllgqlysaakgkGaflng......eklplsrap..piseallvtlfavssrkdtseasllekvesavsae......... 188
                 ++sigl+v+++pv+Gvi++Pll++ly a +g+Ga+l+       +klpl++a+  +  +++l++ +++s+r  ++  +l ++v + ++a          
  KHJ32782.1 106 CISIGLAVKKTPVVGVIYNPLLDELYAAIQGQGAYLKRgsssdkQKLPLRKAEplNDLSKCLIGIEWGSDRTGINY-ELKNNVFTKLAASkedggamvr 203
                 ************************************99999**9*********6655567899***********99.66666666666667899***** PP

                 EEEBESSHHHHHHHHHHTSTSEEEEEC.EBHHHHHHHHHHHHHTTEEEEESSSC.......SSSTTSSEEEEES.CHHHHHHHHHH CS
  Inositol_P 189 gvrsvgssalklaavaeGkadaylefgrekkWDhAAGeaileeaGGvvtdakge.......grlllargiiaan.qkelaellaaa 266
                 g+r++gs+al+la va+G+ d++++ g ++ WD++AG++il e GG v+  + +       +     r+++a + ++  + +++ +
  KHJ32782.1 204 GLRNIGSTALNLASVAAGQQDIFWDGG-CWAWDVCAGWCILVESGGMVVSGNPGeweceveS-----RKYLAVRgAPSGQRQIIDE 283
                 ***************************.*********************9999877444443.....4444444334445555555 PP

>> DUF1134  Protein of unknown function (DUF1134)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   2.4e-05      0.22      43      84 ..     194     238 ..     185     243 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.4e-05
     DUF1134  43 GeeaggalvvGlr.yGeGtlytke..agekkvyWqGpsiGldlGa 84 
                  +e gga+v Glr  G+  l+  +  ag+++++W G    +d+ a
  KHJ32782.1 194 SKEDGGAMVRGLRnIGSTALNLASvaAGQQDIFWDGGCWAWDVCA 238
                 6899********9469998877644499**********9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       311  (0.0173462); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2384.56
//
Query:       KHJ32783.1  [L=202]
Description: hypothetical protein EV44_g0015 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1640.96
//
Query:       KHJ32784.1  [L=367]
Description: hypothetical protein EV44_g3492 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.8e-08   32.4   0.1    2.3e-07   31.1   0.1    1.8  1  RNase_H      RNase H
  ------ inclusion threshold ------
       0.11   12.1   0.8          4    7.0   0.1    2.7  3  YtfJ_HI0045  Bacterial protein of unknown function (YtfJ_HI00


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.1   2.6e-11   2.3e-07       4     142 ..      62     196 ..      35     197 .. 0.73

  Alignments for each domain:
  == domain 1  score: 31.1 bits;  conditional E-value: 2.6e-11
                 EEEEEEEEEECTTTCEEEEE.EECTT..E.EEEEEEC.CCCHHH...HHHHHHHHHHHH..TT.SC..SEEEEEES-HHHHHHHHCCCHHHHHTTSSSE CS
     RNase_H   4 vvvYtDGsclgnpgeggaga.vlykegar.nisaple.eaqtnn...raELsAvieaLk..alksd..ekvniytDSkYvvkgitqwvhrwkknawktt 92 
                 + +YtD+s+++ +   g+g+ v+ +++ r +i ++l  ++ + n     EL+ +++ ++   l++   +++ i++D + +++ +       k  + + +
  KHJ32784.1  62 TFIYTDASYMEDS--KGVGVsVVATDQ-RgTIMEKLAiNTGDGNlvyNGELEGITQGIEygSLQARpgHSFRIFSDNQAALHRLA------KLSDLPGQ 151
                 679*****98544..455554445453.458888777645555523367*********97555555678999****977776333......45566666 PP

                 TTSSBHTTHHHHHHHHHCHC.SSEEEEEE-SCCSSSTHHHHHHHHHHHHHH CS
     RNase_H  93 seqkpvknkdlaellkelak.kkkvqlkwvkgHaGvpkgNemaDrlAkeaa 142
                 + q  + +   ++++k++ + + k++++w++gH+ + +gN  aD lAk+a+
  KHJ32784.1 152 DCQ--IRA---IAAAKKIKEkDAKISISWIPGHSQI-RGNVKADGLAKKAS 196
                 666..444...3333334443889************.8**********996 PP

>> YtfJ_HI0045  Bacterial protein of unknown function (YtfJ_HI0045)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.1   0.00045         4      51      89 ..      37      75 ..      31     101 .. 0.82
   2 ?   -1.9   0.0      0.26   2.3e+03      33      58 ..     146     171 ..     132     174 .. 0.81
   3 ?    2.5   0.0     0.011        99      12      42 ..     337     366 ..     332     367 .] 0.84

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00045
  YtfJ_HI0045 51 akelnaalieaikaakfdrdkyqtttiinaddaivgtgv 89
                 +k+  +++++a ++++f +++++ttt i +d++ +  + 
   KHJ32784.1 37 KKKNPKEIVAAHHQEEFYNTNWETTTFIYTDASYMEDSK 75
                 455558999*********************998776655 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.26
  YtfJ_HI0045  33 sqlaGkvrviqhiaGrssakelnaal 58 
                  s+l G+   i++ia  ++ ke++a++
   KHJ32784.1 146 SDLPGQDCQIRAIAAAKKIKEKDAKI 171
                  67888888899999999999998876 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.011
  YtfJ_HI0045  12 vadkgelvlkedkvsykaWnssqlaGkvrvi 42 
                  ++++ e +l+e ++s ++W+ ++l+G   vi
   KHJ32784.1 337 IEKTVE-FLEETNISTRKWHLNRLQGNRDVI 366
                  556666.78999**************98887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.20s 00:00:00.63 Elapsed: 00:00:00.33
# Mc/sec: 3309.59
//
Query:       KHJ32785.1  [L=409]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-06   26.7   2.4    3.9e-06   26.7   2.4    2.4  3  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   2.4   2.2e-10   3.9e-06       2      17 ..     227     242 ..     226     243 .. 0.93
   2 ?   -3.4   0.4      0.73   1.3e+04       5       8 ..     246     249 ..     246     249 .. 0.86
   3 ?   -1.6   0.8      0.19   3.4e+03       3       7 ..     267     271 ..     266     273 .. 0.78

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 2.2e-10
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +CynC++ GHiar+C+
  KHJ32785.1 227 QCYNCQKYGHIARNCS 242
                 7**************6 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.73
                 SSSS CS
     zf-CCHC   5 nCGe 8  
                 +CG+
  KHJ32785.1 246 KCGQ 249
                 7**8 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.19
                 TSSSS CS
     zf-CCHC   3 CynCG 7  
                 C nC 
  KHJ32785.1 267 CTNCS 271
                 99**5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (409 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       944  (0.0526521); expected 358.6 (0.02)
Passed bias filter:                      533  (0.0297284); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3017.90
//
Query:       KHJ32786.1  [L=1137]
Description: hypothetical protein EV44_g1206 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.14   12.6   2.6       0.18   12.2   0.2    2.6  2  C1-set    Immunoglobulin C1-set domain


Domain annotation for each model (and alignments):
>> C1-set  Immunoglobulin C1-set domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.2         1   1.8e+04      43      60 ..     374     390 ..     361     393 .. 0.59
   2 ?   12.2   0.2     1e-05      0.18      13      76 ..     793     854 ..     784     858 .. 0.83

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 1
                 TTEEEEEEEEETTSEEEE CS
      C1-set  43 egvkttepskesdstyql 60 
                 +  ++++ ++ +d+++++
  KHJ32786.1 374 Q-QNSSTSVEHEDNYFST 390
                 2.4556666666666655 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 1e-05
                 TSEEEEEEEEEEEBSS-EEEEEEETTEEESTTEEEEEEEEETTSEEEEEEEEEEEHHHHHTTSE CS
      C1-set  13 kkkntLtClvtgfyppdikvtWlkngqevtegvkttepskesdstyqllskLevtpsewesgde 76 
                  ++  + Cl+++++ ++i+ t ++ +++  + +     s+++ s+y++++ L++++   e+g++
  KHJ32786.1 793 ISTENISCLIKNYSSENINTTHYSRKENRDN-SLIVGLSQKDQSSYSTSQNLRLEE-ASEAGSV 854
                 4677899***************999999998.999999999************998.3355554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       960  (0.0535445); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.41
# Mc/sec: 8304.41
//
Query:       KHJ32787.1  [L=177]
Description: putative checkpoint protein hus1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0064   16.5   0.9       0.01   15.9   0.9    1.3  1  SPC12     Microsomal signal peptidase 12 kDa subunit (SPC12)
  ------ inclusion threshold ------
        0.1   12.8   0.0       0.14   12.4   0.0    1.2  1  CsgF      Type VIII secretion system (T8SS), CsgF protein


Domain annotation for each model (and alignments):
>> SPC12  Microsomal signal peptidase 12 kDa subunit (SPC12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.9   1.2e-06      0.01      30      66 ..      26      62 ..      19      65 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.2e-06
       SPC12 30 itqdlkltlyillagvvltllvvvPpWpfYnrnplkW 66
                +++ l +t +i l ++++  +vvvP W+ Y+r   ++
  KHJ32787.1 26 VFKTLAVTAIISLTFYLILSFVVVPIWKRYRRRYSNY 62
                367899*************************987666 PP

>> CsgF  Type VIII secretion system (T8SS), CsgF protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.6e-05      0.14      15      83 ..      77     149 ..      65     169 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.6e-05
                 -..--STT--------------------------SS---T......SSSTT--SSHHHHHHHHHHHHHHHTTTTT CS
        CsgF  15 akaqelvykptNPaFGGntlnyswllssAqaqnkfkdkae......asetkekssleeFadsLnrqllsrlsskl 83 
                  + q+++ k+  P+F G+++  s  ls+A+    f+d+        +++++e  sl++  d+  + l srls+ l
  KHJ32787.1  77 QRVQAMIIKYLSPSFWGSQFLRSRHLSNADEGSDFDDDDGeelyevDNNRREALSLDALRDH--SELGSRLSRDL 149
                 45699******************************999876777666666666666666653..55666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       691  (0.0385409); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1326.73
//
Query:       KHJ32788.1  [L=292]
Description: putative vesicular-fusion protein sec17 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.6e-118  395.3  17.2   1.8e-118  395.1  17.2    1.0  1  SNAP      Soluble NSF attachment protein, SNAP
    3.6e-07   29.9  10.5       0.18   12.1   0.4    4.5  4  TPR_8     Tetratricopeptide repeat
    2.6e-06   27.6   9.2      0.031   14.6   1.8    4.1  4  TPR_12    Tetratricopeptide repeat
    1.1e-05   25.1   7.9       0.61   10.3   0.2    5.7  5  TPR_7     Tetratricopeptide repeat
     0.0019   18.2  17.4        1.2    9.5   0.1    6.4  8  TPR_2     Tetratricopeptide repeat
     0.0054   17.3   8.2         57    4.7   0.4    5.9  6  TPR_6     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.039   13.8  15.9        1.4    8.9   0.3    5.3  6  TPR_1     Tetratricopeptide repeat
      0.059   13.4   0.2       0.12   12.3   0.2    1.6  1  DUF2521   Protein of unknown function (DUF2521)
      0.088   12.9   9.7        7.6    6.7   0.5    4.7  4  MIT       MIT (microtubule interacting and transport) domain


Domain annotation for each model (and alignments):
>> SNAP  Soluble NSF attachment protein, SNAP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  395.1  17.2    9e-122  1.8e-118       2     282 .]       4     285 ..       3     285 .. 0.99

  Alignments for each domain:
  == domain 1  score: 395.1 bits;  conditional E-value: 9e-122
                 -HHHHHHHHHHHSS---THHHHH--SHHHHHHHHHHHHHHHHHHHHTT-THHHHHHHHHHHHHHHH.TT-HHHHHHHHHHHHHHHHHT-HHHHHHHHHH CS
        SNAP   2 kaeellakAekklksssglfslfgsksskaeeAadlyeqAAnayklakkweeAgeaflkaAecqek.lkekdeaanayveAakcykkvspeeAvealek 99 
                 ++++ll+kAek++ ++sg fslfg++++k+e+Aadly+qAAna++l+k+++eAgeaf+k+A++q++ l+e+d+aan+++eA+k+ykk  pe+A+++l+ 
  KHJ32788.1   4 DPRALLQKAEKAVAGASGGFSLFGGRQEKWENAADLYTQAANAFRLQKQNKEAGEAFEKCAAIQTDkLNEADDAANTFTEAFKVYKKGYPEDAARCLNV 102
                 7899************************************************************998******************************** PP

                 HHHHHHHTT-HHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHTTSS-TTTGGGHHHH CS
        SNAP 100 AieiytekgrfrraAklkkeiaelyekelgdlekAieaYekAaelyeqeeakalankcllkvAelsaelekyekAieiyekvakkslennllkysvkey 198
                 Ai++yt++g+frraA++k+++ae++e+elgd+++A+e+Ye Aa+++e+++a+alank++lkvA+++a +++y kAie +ekv ++sl+nnl+k+svk+y
  KHJ32788.1 103 AINHYTSRGNFRRAATHKQNVAEVFENELGDMKRAMESYELAANWFENDNAEALANKLYLKVADIAALEGDYYKAIENFEKVSTASLNNNLMKWSVKDY 201
                 *************************************************************************************************** PP

                 HHHHHHHHHHTT-HHHHHHHHHGGG-----------HHHHHHHHHHHHTT-TTTHHHHHHHHTTSS---HHHHHHHHHHHHHHH CS
        SNAP 199 flkaglcrLaagDvvaakralekyeeldpsFassrEakllkdlleaveegdvekfteavkefDkiskldkWkttlLlkiKksie 282
                 flk+glc+La gD+va++raleky++ldpsF+s+rE++ll +l eav++gd+e f+++++++D+iskldkWktt+LlkiK+sie
  KHJ32788.1 202 FLKSGLCHLAVGDLVATNRALEKYRDLDPSFTSTREHQLLIELSEAVDAGDQEIFADKLFQYDQISKLDKWKTTILLKIKNSIE 285
                 **********************************************************************************96 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.4   9.4e-05      0.19       1      31 [.      37      67 ..      37      70 .. 0.92
   2 ?   -0.6   0.1       1.1   2.1e+03      13      31 ..      70      88 ..      65      90 .. 0.68
   3 !    9.4   0.0   0.00065       1.3      13      31 ..     130     148 ..     122     151 .. 0.85
   4 !   12.1   0.4   8.8e-05      0.18       3      31 ..     160     188 ..     159     191 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 9.4e-05
                CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8  1 aeayynlgsiylklgdyeeAkeyyekaleld 31
                a++y + +++ + +++ +eA e++ek+  ++
  KHJ32788.1 37 ADLYTQAANAFRLQKQNKEAGEAFEKCAAIQ 67
                689************************8776 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.1
                HTT-HHHHHHHHHHHHHHH CS
       TPR_8 13 klgdyeeAkeyyekaleld 31
                kl++ + A  ++ +a +  
  KHJ32788.1 70 KLNEADDAANTFTEAFKVY 88
                5677777777777776654 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00065
                 HTT-HHHHHHHHHHHHHHH CS
       TPR_8  13 klgdyeeAkeyyekaleld 31 
                 +lgd++ A+e+ye a  + 
  KHJ32788.1 130 ELGDMKRAMESYELAANWF 148
                 79***********998775 PP

  == domain 4  score: 12.1 bits;  conditional E-value: 8.8e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleld 31 
                 +y++ ++i    gdy +A+e +ek+ +++
  KHJ32788.1 160 LYLKVADIAALEGDYYKAIENFEKVSTAS 188
                 79999*******************98876 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   1.8   1.5e-05     0.031       3      75 ..      37     107 ..      35     109 .. 0.80
   2 ?    3.8   0.1     0.035        71      17      66 ..      72     118 ..      68     129 .. 0.60
   3 ?    4.4   0.1     0.023        45      49      68 ..     129     148 ..      97     150 .. 0.63
   4 !   10.6   0.1   0.00026      0.53       4      31 ..     159     186 ..     155     193 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.5e-05
      TPR_12   3 atalnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                 a ++++ a++ r +++  eA e +ek+ +i++  l++  +++a+t      +y + g +e+A + l+ a++ +
  KHJ32788.1  37 ADLYTQAANAFRLQKQNKEAGEAFEKCAAIQTDKLNE-ADDAANTFTEAFKVY-KKGYPEDAARCLNVAINHY 107
                 6788899************************777665.446888877777776.7888888888888887776 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.035
      TPR_12  17 grydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAle 66 
                  + d+A   + +a  ++++ + +d   +a++l+     y  +g+++ A  
  KHJ32788.1  72 NEADDAANTFTEAFKVYKKGYPED---AARCLNVAINHYTSRGNFRRAAT 118
                 456777777777777775544332...55555555555556666666665 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.023
      TPR_12  49 rnLgrlyralgryeeAlell 68 
                 + Lg++ ra++ ye A +++
  KHJ32788.1 129 NELGDMKRAMESYELAANWF 148
                 23444444444444444444 PP

  == domain 4  score: 10.6 bits;  conditional E-value: 0.00026
      TPR_12   4 talnnlaavlrrlgrydeAlellekale 31 
                 +++ ++a++ +  g+y +A+e++ek+  
  KHJ32788.1 159 KLYLKVADIAALEGDYYKAIENFEKVST 186
                 456679******************9865 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.2    0.0003      0.61      11      35 ..      29      54 ..      28      55 .. 0.85
   2 ?   -0.0   0.0      0.59   1.2e+03      11      27 ..      69      84 ..      59      87 .. 0.80
   3 ?    1.4   0.0      0.21   4.2e+02       9      20 ..     107     118 ..     105     119 .. 0.88
   4 !    7.8   0.1    0.0019       3.8       5      31 ..     123     151 ..     121     156 .. 0.80
   5 ?    4.6   0.0      0.02        39       6      30 ..     165     187 ..     160     193 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.0003
       TPR_7 11 rlGdyeeAielyeqsL.altkdpeda 35
                r+ ++e+A++ly+q+  a++ + +++
  KHJ32788.1 29 RQEKWENAADLYTQAAnAFRLQKQNK 54
                6899**********999998777665 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.59
       TPR_7 11 r.lGdyeeAielyeqsLa 27
                + l++ ++A+  +++  a
  KHJ32788.1 69 DkLNEADDAANTFTE--A 84
                449999*****9999..6 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.21
       TPR_7   9 ysrlGdyeeAie 20 
                 y ++G++++A++
  KHJ32788.1 107 YTSRGNFRRAAT 118
                 899*******97 PP

  == domain 4  score: 7.8 bits;  conditional E-value: 0.0019
       TPR_7   5 Larlysr.lGdyeeAielyeqsL.altkd 31 
                  a+++++ lGd+++A e ye +   +++d
  KHJ32788.1 123 VAEVFENeLGDMKRAMESYELAAnWFEND 151
                 57778888************977777666 PP

  == domain 5  score: 4.6 bits;  conditional E-value: 0.02
       TPR_7   6 arlysrlGdyeeAielyeqsLaltk 30 
                 a++   +Gdy +Aie +e+  + t 
  KHJ32788.1 165 ADIAALEGDYYKAIENFEK--VSTA 187
                 6777779***********9..6555 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.2     0.065   1.3e+02      13      28 ..      29      44 ..      29      46 .. 0.89
   2 !    8.4   1.8    0.0013       2.6       1      30 [.      37      66 ..      37      70 .. 0.89
   3 ?    0.5   0.1      0.42   8.4e+02      13      31 ..      70      88 ..      69      90 .. 0.81
   4 ?    4.1   0.0     0.031        62      12      30 ..      88     106 ..      81     110 .. 0.85
   5 ?   -1.9   0.0       2.6   5.2e+03      11      22 ..     107     118 ..     105     119 .. 0.73
   6 ?    2.0   0.0      0.14   2.8e+02      14      32 ..     131     149 ..     130     151 .. 0.76
   7 !    9.5   0.1   0.00059       1.2       3      27 ..     160     184 ..     158     186 .. 0.89
   8 ?   -2.9   0.0       5.1     1e+04      26      31 ..     220     225 ..     217     230 .. 0.56

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.065
       TPR_2 13 klgdyeeAleafekAl 28
                ++ ++e A++++ +A 
  KHJ32788.1 29 RQEKWENAADLYTQAA 44
                5899**********96 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0013
       TPR_2  1 aealynlGlayyklgdyeeAleafekAlel 30
                a+++ + ++a + +++ +eA eafek+ ++
  KHJ32788.1 37 ADLYTQAANAFRLQKQNKEAGEAFEKCAAI 66
                57888999******************9987 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.42
       TPR_2 13 klgdyeeAleafekAleld 31
                kl++ ++A++ f +A + +
  KHJ32788.1 70 KLNEADDAANTFTEAFKVY 88
                6788899999999998866 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.031
       TPR_2  12 yklgdyeeAleafekAlel 30 
                 yk+g +e+A+++++ A+ +
  KHJ32788.1  88 YKKGYPEDAARCLNVAINH 106
                 899**********999876 PP

  == domain 5  score: -1.9 bits;  conditional E-value: 2.6
       TPR_2  11 yyklgdyeeAle 22 
                 y  +g++ +A+ 
  KHJ32788.1 107 YTSRGNFRRAAT 118
                 667899999876 PP

  == domain 6  score: 2.0 bits;  conditional E-value: 0.14
       TPR_2  14 lgdyeeAleafekAleldP 32 
                 lgd ++A e +e A    +
  KHJ32788.1 131 LGDMKRAMESYELAANWFE 149
                 7899999999998876655 PP

  == domain 7  score: 9.5 bits;  conditional E-value: 0.00059
       TPR_2   3 alynlGlayyklgdyeeAleafekA 27 
                 ++   +++++  gdy +A+e fek+
  KHJ32788.1 160 LYLKVADIAALEGDYYKAIENFEKV 184
                 67788999***************95 PP

  == domain 8  score: -2.9 bits;  conditional E-value: 5.1
       TPR_2  26 kAleld 31 
                 +Ale +
  KHJ32788.1 220 RALEKY 225
                 455544 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1      0.67   1.3e+03      14      28 ..      31      45 ..      24      47 .. 0.80
   2 ?    4.7   0.4     0.029        57       5      26 ..      42      63 ..      38      67 .. 0.84
   3 ?   -0.4   0.1       1.2   2.3e+03      26      26 ..      84      84 ..      66     108 .. 0.59
   4 ?    3.8   0.0     0.053     1e+02       7      24 ..     124     142 ..     122     146 .. 0.85
   5 ?    3.6   0.0     0.063   1.3e+02       3      26 ..     161     184 ..     159     186 .. 0.82
   6 ?    4.1   0.0     0.044        87       3      31 ..     202     230 ..     200     231 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.67
                HHHHHHHHHHHHHHH CS
       TPR_6 14 gdtdkAlealerlik 28
                 ++++A +++ +  +
  KHJ32788.1 31 EKWENAADLYTQAAN 45
                48999***9999876 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.029
                HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6  5 klalsyrklgdtdkAlealerl 26
                ++a ++r +++  +A ea+e++
  KHJ32788.1 42 QAANAFRLQKQNKEAGEAFEKC 63
                4678888899**********97 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 1.2
                H CS
       TPR_6 26 l 26
                 
  KHJ32788.1 84 A 84
                2 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.053
                 HHHHHH.HHHHHHHHHHHH CS
       TPR_6   7 alsyrk.lgdtdkAleale 24 
                 a+ +++ lgd  +A+e +e
  KHJ32788.1 124 AEVFENeLGDMKRAMESYE 142
                 78889879*********98 PP

  == domain 5  score: 3.6 bits;  conditional E-value: 0.063
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAlealerl 26 
                 ++k a      gd+ kA+e +e++
  KHJ32788.1 161 YLKVADIAALEGDYYKAIENFEKV 184
                 567777777778**********98 PP

  == domain 6  score: 4.1 bits;  conditional E-value: 0.044
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   3 lyklalsyrklgdtdkAlealerlikeYP 31 
                 ++k +l++++ gd  +  +ale+ ++  P
  KHJ32788.1 202 FLKSGLCHLAVGDLVATNRALEKYRDLDP 230
                 6899******6699999999999888766 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1      0.15     3e+02      14      27 ..      30      43 ..      29      44 .. 0.92
   2 ?    8.6   1.8   0.00083       1.7       1      29 [.      37      65 ..      37      67 .. 0.90
   3 ?   -2.1   0.1       2.1   4.2e+03      13      30 ..      70      87 ..      69      90 .. 0.71
   4 ?   -1.8   0.0       1.7   3.3e+03      11      20 ..     107     116 ..     103     119 .. 0.75
   5 ?    2.3   0.1     0.082   1.6e+02      13      27 ..     130     144 ..     129     145 .. 0.88
   6 ?    8.9   0.3   0.00071       1.4       8      27 ..     165     184 ..     159     185 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.15
                TT-HHHHHHHHHHH CS
       TPR_1 14 lgkydeAleyyekA 27
                ++k++ A + y +A
  KHJ32788.1 30 QEKWENAADLYTQA 43
                899*********99 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00083
                HHHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1  1 akalynlGnayfklgkydeAleyyekALe 29
                a+ + + +na++ +++ +eA e++ek+  
  KHJ32788.1 37 ADLYTQAANAFRLQKQNKEAGEAFEKCAA 65
                6889999*******************965 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 2.1
                HTT-HHHHHHHHHHHHHH CS
       TPR_1 13 klgkydeAleyyekALel 30
                kl++ d+A   + +A ++
  KHJ32788.1 70 KLNEADDAANTFTEAFKV 87
                667778888888888665 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 1.7
                 HHHTT-HHHH CS
       TPR_1  11 yfklgkydeA 20 
                 y + g++  A
  KHJ32788.1 107 YTSRGNFRRA 116
                 8888888887 PP

  == domain 5  score: 2.3 bits;  conditional E-value: 0.082
                 HTT-HHHHHHHHHHH CS
       TPR_1  13 klgkydeAleyyekA 27 
                 +lg+ + A e ye A
  KHJ32788.1 130 ELGDMKRAMESYELA 144
                 69**********966 PP

  == domain 6  score: 8.9 bits;  conditional E-value: 0.00071
                 HHHHHHTT-HHHHHHHHHHH CS
       TPR_1   8 GnayfklgkydeAleyyekA 27 
                 + +    g+y +A+e +ek+
  KHJ32788.1 165 ADIAALEGDYYKAIENFEKV 184
                 5667789***********96 PP

>> DUF2521  Protein of unknown function (DUF2521)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   6.2e-05      0.12      33     119 ..      75     161 ..      45     169 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6.2e-05
     DUF2521  33 ksvkehfksllpfaslaksiledgCidlaieayLlGaeygrfgyyGEsaeevkkRceeEekelveelfdlllswskeeealaees.ly 119
                 +++ ++f++ ++++++  +     C+++ai+ y   +++ r + +   ++ev +    ++k+ + e ++l  +w+++++a+a ++ ly
  KHJ32788.1  75 DDAANTFTEAFKVYKKGYPEDAARCLNVAINHYTSRGNFRRAATHKQNVAEVFENELGDMKRAM-ESYELAANWFENDNAEALANkLY 161
                 46778899999999999999999**********************9999999888777777765.5689999**99999887665465 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.5    0.0038       7.6      17      39 ..      30      52 ..      29      66 .. 0.79
   2 ?    5.6   0.3    0.0083        17      14      30 ..      75      91 ..      63     128 .. 0.81
   3 ?    2.3   0.1     0.089   1.8e+02      14      35 ..     128     149 ..     115     159 .. 0.82
   4 ?    0.8   0.0      0.27   5.3e+02      27      39 ..     174     186 ..     168     202 .. 0.69

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0038
         MIT 17 agnyeeAlelYkealelLlqalk 39
                ++++e A +lY++a + + +  +
  KHJ32788.1 30 QEKWENAADLYTQAANAFRLQKQ 52
                5799************9987665 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0083
         MIT 14 eDnagnyeeAlelYkea 30
                 D a+ + eA++ Yk++
  KHJ32788.1 75 DDAANTFTEAFKVYKKG 91
                57888888888888876 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.089
         MIT  14 eDnagnyeeAlelYkealelLl 35 
                 e + g+ + A+e Y+ a + + 
  KHJ32788.1 128 ENELGDMKRAMESYELAANWFE 149
                 4567999*********999885 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.27
         MIT  27 YkealelLlqalk 39 
                 Y +a+e + ++ +
  KHJ32788.1 174 YYKAIENFEKVST 186
                 7788888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       811  (0.045234); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 1985.05
//
Query:       KHJ32789.1  [L=257]
Description: putative cell cycle checkpoint protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-48  165.7   0.0    1.5e-48  165.4   0.0    1.0  1  Hus1      Hus1-like protein


Domain annotation for each model (and alignments):
>> Hus1  Hus1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.4   0.0   8.2e-53   1.5e-48     106     284 ..       2     232 ..       1     235 [. 0.90

  Alignments for each domain:
  == domain 1  score: 165.4 bits;  conditional E-value: 8.2e-53
        Hus1 106 plLaleisglss..................................reretvvthdiPvkvlseseveelkePelrdpdvsilLPdllqLkklvdkfkk 170
                 p+L+l+i +                                     reretvvt+diPv+vl+++ ve+++eP++r+pd +i+LP+llqLk+++d+f++
  KHJ32789.1   2 PVLSLTIVTHIAsfsnaatsaflgeanfnnvgehmfqeenldadlgRERETVVTQDIPVRVLTTESVEGIHEPRVREPDAHIILPSLLQLKSISDRFTR 100
                 67777766665566777788888888888888888888888889999**************************************************** PP

        Hus1 171 l...............ssdlltlsankdGeLklvvetdlvrvsskwskLenpeldasq.leqlesereaeeeeedaedeaeeakvrvdlkklarvlsvg 253
                 l                +++l+l an++G+Lkl+++td +++ss+w++L np ld++q ++ +es ++  +++ ++  ++ + kv +d+k++ rvlsvg
  KHJ32789.1 101 LavatsngtvrgtssvIGPKLELAANMHGSLKLSITTDVLNISSVWTGLTNPVLDPKQvEDGEESLEDHPSTKLREAGPDAWSKVLIDGKDWGRVLSVG 199
                 **********************************************************65566666666677778889********************* PP

        Hus1 254 elkpkkvvacivhetalvlyvlldd...eedvvl 284
                 +l   +v+ac+++++al+lyv+l++    +++vl
  KHJ32789.1 200 RLG-GRVIACFADGHALILYVYLTNyegADESVL 232
                 ***.*******************98766555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       283  (0.0157845); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1963.99
//
Query:       KHJ32790.1  [L=192]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.7e-10   39.1   0.5    8.4e-10   38.5   0.5    1.3  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase
     0.0096   15.5   0.0     0.0096   15.5   0.0    1.2  1  Exo_endo_phos    Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.5   9.4e-14   8.4e-10      32     118 ..     104     184 ..      83     185 .. 0.87

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 9.4e-14
  Exo_endo_phos_2  32 kiiilGDfNakhplWgsedtdssargeeLiefleehslsllnllksgptfkssngsstiDltltsdnlalskleleeedlgSDHrpi 118
                      +i+i+GDfN  h +W+   t+s  +gee+ ++ e+h+  +l   +   +       +t+Dl +t+ + a   + +++e ++SDH+pi
       KHJ32790.1 104 RIVITGDFNSVHWAWQLGATHSYGQGEEIKKWAEDHNFACLIIGEAIHRA-----GDTLDLDFTNITEACA-WVDHNECMNSDHLPI 184
                      89**************9999999****************77775522333.....48***********999.99999********99 PP

>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.1e-06    0.0096     132     167 ..      90     125 ..      17     182 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.1e-06
                    HHHHHHHHHHHTTSEEEEEEE-SSSTSGGGBSCGHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 132 lllqvealnadrgapvivaGDfNarpsdddsrvlrt 167
                    ++  vea + d  ++++++GDfN+++++++   + +
     KHJ32790.1  90 DVSPVEAPTGDAMHRIVITGDFNSVHWAWQLGATHS 125
                    555566667777789**************8877654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1406.13
//
Query:       KHJ32791.1  [L=210]
Description: putative gnat family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.8e-10   39.2   0.0      1e-09   38.7   0.0    1.3  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
    3.2e-09   36.8   0.0      5e-09   36.2   0.0    1.2  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
    2.7e-08   34.1   0.0    3.9e-08   33.6   0.0    1.3  1  Acetyltransf_1   Acetyltransferase (GNAT) family
     0.0054   16.8   0.0       0.01   15.9   0.0    1.5  1  Acetyltransf_CG  GCN5-related N-acetyl-transferase
  ------ inclusion threshold ------
      0.019   15.1   0.0      0.042   13.9   0.0    1.6  1  Acetyltransf_9   Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.7   0.0   2.9e-13     1e-09       2      74 ..      89     171 ..      88     173 .. 0.73

  Alignments for each domain:
  == domain 1  score: 38.7 bits;  conditional E-value: 2.9e-13
                     TEEEEEEEETTEEEEEEEEEEES..TCTEEEEE-GGGTTSSHHHHHHHH...TT..SEEEEEEEEETHH..HHHH..HHHHTTE CS
  Acetyltransf_7   2 kgevfVaeddgkivGfialslld..aeitrlaVdpeyrgkGiGraLlea...ae..kgiileqlelnae..kaik..fYeklGF 74 
                     +++++Va d+ +++Gf++ ++ld  ++i ++ V+ e++g+GiG+ L++    ++  + +  + ++l++    a +  +Y ++GF
      KHJ32791.1  89 SNHLWVAVDKYGPIGFLCGEELDgnFHIVEVSVSHECQGRGIGKGLMTTmleQItmERCFKS-VTLTTYrsVAWNgpWYSRMGF 171
                     689***************999999888888*****************954542244445422.33322222222246******* PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.0   1.4e-12     5e-09      17     110 ..      78     175 ..      63     179 .. 0.81

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 1.4e-12
  Acetyltransf_10  17 ispealrerieegealllvaeeggkivGvi...elrdgshisllfVdpeyrgqGigkaLleaveee..aekdgikleltvnasp.yavpfYekl 104
                      + pe+l+++  + +++l+va ++  ++G++   el+ + hi  + V++e++g+Gigk L+ +++e+  +e++  +++lt   s     p Y ++
       KHJ32791.1  78 VGPERLASM--TDSNHLWVAVDKYGPIGFLcgeELDGNFHIVEVSVSHECQGRGIGKGLMTTMLEQitMERCFKSVTLTTYRSVaWNGPWYSRM 169
                      555666666..58889**************887778888***************************6444444444777777776899****** PP

  Acetyltransf_10 105 GFkavg 110
                      GF +v 
       KHJ32791.1 170 GFGEVH 175
                      **8876 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.0   1.1e-11   3.9e-08      32     117 .]      88     171 ..      66     171 .. 0.87

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 1.1e-11
                     TC.EEEEEEETTEEEEEEEEEEEETTSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTE.SEEEEEEETTEHHHHHHHHHTTE CS
  Acetyltransf_1  32 ae.gllvaeedgeliGfisllkipdekggvayieslaVspeyrgkGlGsaLlealeerareegi.kkivlaveedndaairlYeklGF 117
                     ++ +l+va +   +iGf+++   +     + +i ++ Vs e++g+G+G+ L+++++e+   e + k + l++  +     + Y ++GF
      KHJ32791.1  88 DSnHLWVAVDKYGPIGFLCGEELDG----NFHIVEVSVSHECQGRGIGKGLMTTMLEQITMERCfKSVTLTTYRSVAWNGPWYSRMGF 171
                     33499**888888**********99....89*************************98888888899999888888788999988998 PP

>> Acetyltransf_CG  GCN5-related N-acetyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   2.9e-06      0.01      18      56 ..     108     145 ..      91     156 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 2.9e-06
  Acetyltransf_CG  18 evrkegvldfthTeVpeelrGkGiAkkLvkaalddaree 56 
                      e + +g +++  + V+ e +G+Gi+k L++++l+++  e
       KHJ32791.1 108 E-ELDGNFHIVEVSVSHECQGRGIGKGLMTTMLEQITME 145
                      3.6677999*************************99765 PP

>> Acetyltransf_9  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.2e-05     0.042      75     126 ..     115     172 ..     105     174 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.2e-05
                     EEEEEEE-CCGTTS-HHHHHHHHHHHHHHHT.T--EEEE--.....SSHHHHHTTT-E CS
  Acetyltransf_9  75 gvtgVavapehrgrgvlskLlaraleemree.gqplsllfP.....ssipiYrrfGye 126
                      ++ V+v  e +grg+ + L++++le++  e   + ++l+       + p Y r+G++
      KHJ32791.1 115 HIVEVSVSHECQGRGIGKGLMTTMLEQITMErCFKSVTLTTyrsvaWNGPWYSRMGFG 172
                     6999*******************99998755223333343322222445777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1608.79
//
Query:       KHJ32792.1  [L=1042]
Description: putative rad4 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-33  115.2   0.2    7.1e-33  113.4   0.2    2.1  1  Rad4            Rad4 transglutaminase-like domain
    3.2e-26   91.5   0.2    8.6e-26   90.1   0.2    1.8  1  BHD_3           Rad4 beta-hairpin domain 3
    4.7e-17   61.5   0.1    1.1e-16   60.4   0.1    1.6  1  BHD_1           Rad4 beta-hairpin domain 1
    4.4e-15   56.4   0.5    4.4e-15   56.4   0.5    3.0  3  BHD_2           Rad4 beta-hairpin domain 2
  ------ inclusion threshold ------
      0.021   15.2   0.0        0.1   13.0   0.0    2.2  1  Transglut_core  Transglutaminase-like superfamily


Domain annotation for each model (and alignments):
>> Rad4  Rad4 transglutaminase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.4   0.2     2e-36   7.1e-33      10     145 ..     439     604 ..     430     606 .. 0.88

  Alignments for each domain:
  == domain 1  score: 113.4 bits;  conditional E-value: 2e-36
                 --BSS---.............--TTHHHHHTTS-SEEEEEEETTTTEEEEEESSSS-EE....SS--TTS--...TGGGS----EEEEE-TTS-EEE-H CS
        Rad4  10 slksdksk.......kketkkkkkrlkdkdlpypvyWvEvfspekkkwisvdplvgsti....ekkeilepl...aekakqvlsYVvAfdsdgsakDVT 94 
                 s+++d s+         ++k+ + +++d+dl+yp+yW Ev+sp++kk+i++dpl +++i    e+ e++ep+   + k kqv++YV++++sdg+akDVT
  KHJ32792.1 439 SSDNDFSDdgslvgaVDNQKSASLSNYDRDLKYPHYWSEVLSPVTKKYIPIDPLITQIIatnrELIEKFEPRstkSGKLKQVIAYVIGYSSDGTAKDVT 537
                 44444444555565555677788899**********************************************999999********************* PP

                 HHH-T..TCCCCHGGGSGG.............GSHHHHHHHHHHHHHH--S---H....HHHHHHHH CS
        Rad4  95 rRYls.dysnsktkklrve.............kskeekkWfesvlrplekrnkert..evdalEdae 145
                 +RYl+ +++++ktk  r +             k++ +++Wf++++ ++e++ ++++  ++d+ E+a+
  KHJ32792.1 538 TRYLKgKMWPGKTKTYRYPpeklaikdpngkvKRYIQNDWFKNLMYFYERGGEKYPrdAIDDFEEAT 604
                 ********************************9**********************666666666665 PP

>> BHD_3  Rad4 beta-hairpin domain 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.1   0.2   2.4e-29   8.6e-26       1      73 [.     746     816 ..     746     818 .. 0.94

  Alignments for each domain:
  == domain 1  score: 90.1 bits;  conditional E-value: 2.4e-29
                 ----TTS-EE-SSGGGS-TTEEEEE-TTHHHHHHHCT---EEEEEEEEE-SS-EE..EEEEEEEEEGGGHHHH CS
       BHD_3   1 vPkNeygnieifkpsmlPegavhislkgaakaakklgidyapAvvGFefkgrrgkgiPvidGivVaeedeeav 73 
                 +PkNe+gni+++++smlP+gavhi+l+g+ k++++lg d+a+Av+GFef++r   ++P+i+G+vVa+e+ + +
  KHJ32792.1 746 IPKNEFGNIDLYVESMLPKGAVHIPLRGIPKICRRLGFDFAEAVTGFEFGNR--IAVPIITGVVVAAEHNDVI 816
                 8************************************************943..447************9987 PP

>> BHD_1  Rad4 beta-hairpin domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.4   0.1     3e-20   1.1e-16       6      51 .]     621     673 ..     617     673 .. 0.91

  Alignments for each domain:
  == domain 1  score: 60.4 bits;  conditional E-value: 3e-20
       BHD_1   6 enlqdfKnhplYvLerhLkrnEvlhpdakpvgvfkk.......kepVYrRsdV 51 
                 e+lq++K++ +YvLerhLkr+E+l+p+ak v++f+        ke V++R+dV
  KHJ32792.1 621 ETLQYYKTSSEYVLERHLKREEALVPGAKLVKYFTSgkssnnfKEGVFLRKDV 673
                 8*********************************4467777889********9 PP

>> BHD_2  Rad4 beta-hairpin domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1         5   1.8e+04      19      32 ..     412     424 ..     402     440 .. 0.50
   2 !   56.4   0.5   1.2e-18   4.4e-15       1      63 [.     677     738 ..     677     739 .. 0.97
   3 ?   -3.5   0.2         5   1.8e+04      39      40 ..     837     857 ..     822     867 .. 0.44

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 5
       BHD_2  19 PvKrvksraktark 32 
                 P K+ ++ra+ +++
  KHJ32792.1 412 PKKT-QKRASVNNS 424
                 3333.333333333 PP

  == domain 2  score: 56.4 bits;  conditional E-value: 1.2e-18
       BHD_2   1 rSaerWyrlGReVkpgelPvKrvksraktarkkredekkeeeeeeeegevpLYgewQTelYvp 63 
                 +S e+W+++GR  kpge+P+K+v+ ra+t+ ++r+ +++ ee ++e+  ++L++++QTe+++p
  KHJ32792.1 677 KSVETWHKEGRAPKPGEQPLKHVPYRAATTHRRRKLAEA-EEATGEKMLQGLFSHSQTEWIIP 738
                 89*******************************999998.9999****************998 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 5
       BHD_2  39 k...................e 40 
                 +                   +
  KHJ32792.1 837 QtvlqmwrkllmsqrvikrmK 857
                 233334444444444444332 PP

>> Transglut_core  Transglutaminase-like superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   2.9e-05       0.1      57      81 ..     326     355 ..     307     491 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.9e-05
  Transglut_core  57 faslfvallRalGipaRvvtgyls.....g 81 
                      a+lf+allRa+G+ +R+vt +++     +
      KHJ32792.1 326 GAQLFTALLRAIGLNSRMVTSLQPvgfgwN 355
                     499*****************9887544441 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1042 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1195  (0.0666518); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.75u 0.27s 00:00:01.02 Elapsed: 00:00:00.45
# Mc/sec: 6992.92
//
Query:       KHJ32793.1  [L=191]
Description: putative magnesium-dependent phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-63  214.1   0.0    1.2e-63  213.9   0.0    1.0  1  Acid_PPase  Acid Phosphatase
     0.0046   17.1   0.3      0.075   13.1   0.0    2.3  2  HAD_2       Haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> Acid_PPase  Acid Phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.9   0.0   1.4e-67   1.2e-63       2     169 .]      19     185 ..      18     185 .. 0.99

  Alignments for each domain:
  == domain 1  score: 213.9 bits;  conditional E-value: 1.4e-67
                 --SEEEE-STTTSSSS-TTTSS-S-EEE-TTS.-EEETT--EE---TTHHHHHHHHHHTT--EEEEE--S-HHHHHHHHHHTT-G..........GGES CS
  Acid_PPase   2 lpklivFDLDyTLWpfevdtlvsaplkkeskksevvDrrgeelklypdveeileelkskevklavaSrtdepdlarelLklleindakekekklldvfd 100
                 lpk+i+FDLDyTLWp+++dt++++p++++s++  v D++g++ k+y+dv++il ++k++++k+ +aSrt++pdl +++L+ ++i+++++++kk+ ++fd
  KHJ32793.1  19 LPKMIIFDLDYTLWPLWIDTHITPPIRSSSNHDGVRDATGQTYKFYKDVPDILTAIKHCGIKIGIASRTSAPDLGEKILNIIHIKSKNGESKKANEFFD 117
                 8************************************************************************************************** PP

                 EEEESSS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HHHHHHHHHHHHHH CS
  Acid_PPase 101 dveiykgsktkhfeklkkktgieyedmlfFDdesrnievesrlgvtfvlvpdGltreefekglkewrkk 169
                 + eiy+gsk++hf+kl++++gi+y +mlfFDde+rn++ves lgvt++l +dG++ +ef++g+++wr++
  KHJ32793.1 118 YKEIYPGSKITHFKKLHQSSGISYREMLFFDDERRNKNVES-LGVTMYLLEDGMSINEFDNGIRHWRQR 185
                 *****************************************.************************985 PP

>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.3     0.024   2.1e+02       1       9 [.      23      31 ..      23      34 .. 0.92
   2 !   13.1   0.0   8.4e-06     0.075      76     112 ..      59      95 ..      47     150 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.024
       HAD_2  1 iiFDlDgTl 9 
                iiFDlD Tl
  KHJ32793.1 23 IIFDLDYTL 31
                8*******9 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 8.4e-06
       HAD_2  76 kevkpydgvkelLeeLkeagyklgivTsksreaveek 112
                 ++ k+y++v ++L  +k+ g+k+gi++  s+  + ek
  KHJ32793.1  59 QTYKFYKDVPDILTAIKHCGIKIGIASRTSAPDLGEK 95 
                 4789***********************9988776555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       408  (0.0227564); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1489.70
//
Query:       KHJ32794.1  [L=461]
Description: putative apses transcription factor xbp1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 3760.04
//
Query:       KHJ32795.1  [L=384]
Description: putative tpr repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-10   39.1   1.1     0.0002   21.0   0.0    3.5  3  TPR_1     Tetratricopeptide repeat
    6.4e-07   29.0   0.2       0.97    9.7   0.0    3.5  3  TPR_2     Tetratricopeptide repeat
     0.0003   21.2   0.0     0.0007   20.0   0.0    1.6  1  TPR_19    Tetratricopeptide repeat
     0.0019   18.3   0.5       0.27   11.5   0.1    3.2  3  TPR_8     Tetratricopeptide repeat
     0.0047   17.1   0.9       0.01   16.0   0.9    1.7  1  ANAPC3    Anaphase-promoting complex, cyclosome, subunit 3


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0     0.001       3.7       8      29 ..      75      96 ..      68      97 .. 0.89
   2 !   21.0   0.0   5.6e-08    0.0002       4      34 .]     134     164 ..     132     164 .. 0.95
   3 !    7.5   0.0     0.001       3.7       9      31 ..     173     195 ..     165     198 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.001
                HHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1  8 GnayfklgkydeAleyyekALe 29
                Gn +f+++k+++A  +y kA+ 
  KHJ32795.1 75 GNECFSKKKWKDAKIFYGKAID 96
                9*******************96 PP

  == domain 2  score: 21.0 bits;  conditional E-value: 5.6e-08
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALelnPnn 34 
                 l n+++++++l++y   ++++ kAL+ nP n
  KHJ32795.1 134 LVNRAACHLELQNYRSTIQDCGKALQTNPRN 164
                 78***************************87 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.001
                 HHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   9 nayfklgkydeAleyyekALeln 31 
                  a++ lg+  eA +++e  L+++
  KHJ32795.1 173 KALLALGRVTEAKDACECGLSID 195
                 6899*****************99 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0035        12       8      29 ..      75      96 ..      68      97 .. 0.89
   2 !    9.7   0.0   0.00027      0.97       3      34 .]     133     164 ..     132     164 .. 0.94
   3 !    9.1   0.0   0.00042       1.5       2      25 ..     166     189 ..     165     198 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0035
       TPR_2  8 GlayyklgdyeeAleafekAle 29
                G+ ++ ++++++A+ ++ kA+ 
  KHJ32795.1 75 GNECFSKKKWKDAKIFYGKAID 96
                8999****************85 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00027
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 +l n++ ++++l++y   ++++ kAl+ +P+n
  KHJ32795.1 133 CLVNRAACHLELQNYRSTIQDCGKALQTNPRN 164
                 5889**************************87 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.00042
       TPR_2   2 ealynlGlayyklgdyeeAleafe 25 
                 +a+y+  +a+++lg+  eA++a+e
  KHJ32795.1 166 KAYYRSSKALLALGRVTEAKDACE 189
                 79*******************998 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0     2e-07    0.0007       2      49 ..     142     189 ..     141     207 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 2e-07
      TPR_19   2 laegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLd 49 
                 l+ ++y + ++   +alq +p n  a ++  +allalg+++eA+++++
  KHJ32795.1 142 LELQNYRSTIQDCGKALQTNPRNIKAYYRSSKALLALGRVTEAKDACE 189
                 56688999999999******************************9876 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.45   1.6e+03      12      29 ..      79      96 ..      75      97 .. 0.76
   2 ?    2.9   0.0     0.044   1.6e+02       4      33 ..     134     163 ..     133     164 .. 0.90
   3 !   11.5   0.1   7.6e-05      0.27       2      33 ..     166     197 ..     165     198 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.45
                HHTT-HHHHHHHHHHHHH CS
       TPR_8 12 lklgdyeeAkeyyekale 29
                +++++ + Ak +y ka++
  KHJ32795.1 79 FSKKKWKDAKIFYGKAID 96
                566666789*******96 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.044
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ++n + ++l+l++y + ++ + kal+ +p 
  KHJ32795.1 134 LVNRAACHLELQNYRSTIQDCGKALQTNPR 163
                 57889999*****************99996 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 7.6e-05
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 +ayy+ ++++l lg+  eAk ++e  l++d d
  KHJ32795.1 166 KAYYRSSKALLALGRVTEAKDACECGLSIDTD 197
                 89*********************998888866 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.9   2.9e-06      0.01      30      78 ..     138     187 ..      80     189 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.9e-06
                 HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHH CS
      ANAPC3  30 AlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaa 78 
                 A c++++++y + ++ + ka ++n++++++ y   ++ll+L+++ eA +a
  KHJ32795.1 138 AACHLELQNYRSTIQDCGKAlQTNPRNIKAYYRSSKALLALGRVTEAKDA 187
                 99*********************************************776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       823  (0.0459033); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2806.63
//
Query:       KHJ32796.1  [L=489]
Description: putative hemolysin-iii family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-60  203.7  18.3      4e-60  203.3  18.3    1.1  1  HlyIII    Haemolysin-III related
  ------ inclusion threshold ------
       0.53   10.4   5.3      0.094   12.8   0.7    2.1  2  SPC12     Microsomal signal peptidase 12 kDa subunit (SPC12)


Domain annotation for each model (and alignments):
>> HlyIII  Haemolysin-III related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.3  18.3   4.5e-64     4e-60       1     224 []     246     468 ..     246     468 .. 0.96

  Alignments for each domain:
  == domain 1  score: 203.3 bits;  conditional E-value: 4.5e-64
      HlyIII   1 fslhnEtlniwtHllgailfivlailllslaevken.sklakvvvlvfllgallcllcSalyHtlsihseeklrkffaklDysgIslliagsylplily 98 
                 f+++nE++niw+H +g+ +++ +a+ +++ +   ++ ++ +  + +vf+++a++cl+cS+++Ht+++  ++ l + fa++Dy+gIsllia+s+++++++
  KHJ32796.1 246 FGISNESVNIWSHAVGLFIVLSIAFHYYPTSVNFSQsTTADICIAAVFFFAACKCLVCSTMWHTMNSVADQTLMERFACVDYTGISLLIAASIMTTEYT 344
                 7899****************9999999999887777778899999****************************************************** PP

      HlyIII  99 alakapkagllylslilalgvlgiisklvplfsrpearplravlfillgllgvipllhlllvltqlgeaaelalvllvlggvlylvGavfYalrvPErl 197
                 a++++p  +++yl+l+ +lg+ g+i+ ++p f+r+ + + r+++++ lg+ g+ p+++ ll+ +++++a+ +++  +++++++y++Ga++Ya++vPE++
  KHJ32796.1 345 AFYCEPVSQWIYLTLTGLLGIGGVILPWHPTFNRADMAWARVAFYMSLGATGLGPAFQ-LLMNQGFSYAW-QFYAPIAKSLLVYTLGAIVYASQVPEKW 441
                 **********************************************************.55656688888.8899************************ PP

      HlyIII 198 kpgkfdivghsHqiFHvfvvlgalfhy 224
                  pg+fd++g+sH+++H+ v+lg+lfhy
  KHJ32796.1 442 YPGAFDYIGGSHNLWHFAVLLGILFHY 468
                 **************************8 PP

>> SPC12  Microsomal signal peptidase 12 kDa subunit (SPC12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.3      0.56     5e+03      36      42 ..     287     293 ..     252     311 .. 0.56
   2 ?   12.8   0.7     1e-05     0.094      16      68 ..     333     385 ..     326     387 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.56
       SPC12  36 ltlyill 42 
                 +++ +++
  KHJ32796.1 287 ICIAAVF 293
                 2233333 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 1e-05
       SPC12  16 ilvlsaviafivGyitqdlkltlyillagvvltllvvvPpWpfYnrnplkWlk 68 
                 ++ +s +    + ++++ +++ +y++l g++    v++P  p +nr  + W  
  KHJ32796.1 333 LIAASIMTTEYTAFYCEPVSQWIYLTLTGLLGIGGVILPWHPTFNRADMAWAR 385
                 5666667777889**************************************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       808  (0.0450667); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 3649.39
//
Query:       KHJ32797.1  [L=1563]
Description: putative tmem1 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      9e-30  103.4   0.0    1.7e-29  102.5   0.0    1.5  1  TRAPPC10     Trafficking protein particle complex subunit 10,
     0.0036   16.9   0.1      0.008   15.8   0.1    1.6  1  Foie-gras_1  Foie gras liver health family 1


Domain annotation for each model (and alignments):
>> TRAPPC10  Trafficking protein particle complex subunit 10, TRAPPC10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.5   0.0   1.9e-33   1.7e-29       1     156 []    1358    1551 ..    1358    1551 .. 0.91

  Alignments for each domain:
  == domain 1  score: 102.5 bits;  conditional E-value: 1.9e-33
    TRAPPC10    1 pvdvPsvdivhtvdlsllsqevsskkpsaeeslrvgqpislelvittsrrwesedeeea........denettklmYevvdnsdtWlvgGkkrgdfs 89  
                  pvd+Ps+++vhtvdl++l+ ++      + + ++v+qpi ++l+i+ +r+w++e++ +         ++++++ ++Ye+   s+tW++gG+++g+f+
  KHJ32797.1 1358 PVDIPSITVVHTVDLQILELPMPH---FGAARVAVNQPITVSLSINWTRKWDTEYAFKLagvekfnsNQEDSYIFSYEILSPSETWIIGGRRKGHFK 1451
                  8**********************7...699************************8877799****999999************************** PP

    TRAPPC10   90 vp............vkegeshtvqlelipLkaGeLllPkVevkkllph.....................skqkgaamprsqelpsgevdnsnggeqv 153 
                  vp             + ++  t++++lipL++G L++P+Ve+k+ +p                      + q+ +  p ++  +s+  d++n+ e +
  KHJ32797.1 1452 VPkanetsedsissYSGESGLTFPIVLIPLRQGLLPYPTVEIKAIVPPlpsssllpmqnsarastmsskNFQAHINLPPQEPNVSCAMDYKNAVEFI 1548
                  *966666666655555555555************************99******************98777788888999999************** PP

    TRAPPC10  154 lVl 156 
                  +V+
  KHJ32797.1 1549 HVV 1551
                  997 PP

>> Foie-gras_1  Foie gras liver health family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.1   8.9e-07     0.008     175     258 ..     755     838 ..     698     839 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 8.9e-07
  Foie-gras_1 175 kaleeFskrkqtRlaeelsleiAeeylrlgdwkkalellqpltlsyrkegWwsLleevlwalrecalkvqdvkdvlavdleLls 258
                  kal  ++  ++   ++++  ++A   ++++d++ +   l+ +t+ y + gW  +  ++l+   +c  +++ +++++++ + Lls
   KHJ32797.1 755 KALRHYTVANSLHSVNSCVADLAILKYHMKDYTASASYLKRMTVFYDETGWKNVELSMLIIYAKCLQHLERREEYVQIIIRLLS 838
                  67788888888889999999************************************************************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.89u 0.28s 00:00:01.17 Elapsed: 00:00:00.45
# Mc/sec: 10423.86
//
Query:       KHJ32798.1  [L=221]
Description: putative gaj protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.1e-23   81.1   0.6    1.1e-22   80.1   0.6    1.6  1  Mnd1            Mnd1 HTH domain
      0.007   16.1   1.8      0.016   14.9   1.2    1.9  2  DUF4364         Domain of unknown function (DUF4364)
  ------ inclusion threshold ------
      0.018   14.5   1.4      0.023   14.1   0.5    1.6  2  RNA_pol_Rpc34   RNA polymerase Rpc34 subunit
      0.049   13.8   1.2       0.13   12.4   0.2    2.0  2  F_actin_bund_C  F actin bundling C terminal
       0.05   13.7   1.0       0.16   12.1   0.2    2.1  2  CtsR_C          CtsR C-terminal dimerization domain
       0.12   12.7   0.6       0.38   11.1   0.6    1.9  1  TFIIE_beta      TFIIE beta subunit core domain


Domain annotation for each model (and alignments):
>> Mnd1  Mnd1 HTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.1   0.6   3.7e-26   1.1e-22       1      59 [.      15      73 ..      15      74 .. 0.97

  Alignments for each domain:
  == domain 1  score: 80.1 bits;  conditional E-value: 3.7e-26
        Mnd1  1 ileifqeskefytlKeleklapkekgivsqsVkdvlqsLvdDglveveKiGssnvyWsF 59
                +le+++++ e++tlKelek++++ +++++++ kd+lq+L+d++l+++eKiGs n+yW+F
  KHJ32798.1 15 VLEYLKSTMEVFTLKELEKIMQSVASVNQMQAKDYLQALLDENLIHMEKIGSGNWYWCF 73
                58999****************************************************** PP

>> DUF4364  Domain of unknown function (DUF4364)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   1.2   5.4e-06     0.016       9     109 ..      19     119 ..      14     130 .. 0.78
   2 ?   -1.4   0.0      0.58   1.7e+03       6      31 ..     188     213 ..     186     214 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 5.4e-06
     DUF4364   9 lkkvkfpltnsqlseiileneytnYfdlqqalseLvesglieeeek.enktlykiTekGketlelfenripksirekideylkenkeelkkesevkady 106
                 lk++ +  t ++l +i+++   +n ++ +++l+ L++++li++e+  +++ +   T++ k++ e + n+++ +  + + e l+ + +++  e + + +y
  KHJ32798.1  19 LKSTMEVFTLKELEKIMQSVASVNQMQAKDYLQALLDENLIHMEKIgSGNWYWCFTSDAKRNREKVMNNLQVEQSH-LVELLAATDHNIALEMSRRENY 116
                 667777789999********************************88466666689999999999999999877544.4445555566666666666555 PP

     DUF4364 107 ykk 109
                  k+
  KHJ32798.1 117 DKN 119
                 555 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.58
     DUF4364   6 lYllkkvkfpltnsqlseiileneyt 31 
                 +Yl   ++  + ++++++ ++ ney+
  KHJ32798.1 188 CYLAPLLSDRVRQAEIMHAMCGNEYV 213
                 7888889999999********99997 PP

>> RNA_pol_Rpc34  RNA polymerase Rpc34 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.5   7.8e-06     0.023      14      81 ..      14      80 ..       3      96 .. 0.77
   2 ?   -1.8   0.0      0.53   1.6e+03     257     316 ..     137     196 ..     103     208 .. 0.60

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 7.8e-06
                   HHHHHHHCSSSSSHCCHHHHHHH...STTSHHHHHHHHHHHHHHCTSEECCC.STTSCECEE--CCCHHHH CS
  RNA_pol_Rpc34 14 rlleelrkaseqklfsqqdLqdd...ipslslklllsavqeLldkkllvllknsndeLvyravsreeAkkk 81
                   ++le l+++   + f++++L++    + s+++ ++ +++q Lld++l++  k   ++  + +   ++Ak+ 
     KHJ32798.1 14 KVLEYLKST--MEVFTLKELEKImqsVASVNQMQAKDYLQALLDENLIHMEK-IGSG-NWYWCFTSDAKRN 80
                   566666666..88999999988755688899999999***************.5555.6777777888764 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.53
                    HSSSCEEETTT.XXXEEEETTHHHHHCCTTTTS.XXXXXXX.SSSSSTTXXSSXSSSSSXX CS
  RNA_pol_Rpc34 257 yDgklekvkvsagyrvqratkqnvlrltskrrkeakvvqpe.alasglveapcgecpvfdl 316
                    yD+++       ++++    + n +++ +k  +++++ +   ++++++  ++c   p ++ 
     KHJ32798.1 137 YDELVKESACL-SKELECYCEYNPMEMKRKVDETKRFKDSAlLWTNNIESLECYLAPLLSD 196
                    66666555544.3344444455566665566655555443314666666666666666555 PP

>> F_actin_bund_C  F actin bundling C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.2   4.4e-05      0.13      18      53 ..      28      64 ..      26      66 .. 0.93
   2 ?   -0.9   0.1       0.6   1.8e+03      10      23 ..      77      90 ..      73      94 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.4e-05
  F_actin_bund_C 18 mkeLeakaalgG.VkgmaAkneLaqmkseDqlelnka 53
                     keLe+  +  + V++m+Ak  L++++ e    ++k+
      KHJ32798.1 28 LKELEKIMQSVAsVNQMQAKDYLQALLDENLIHMEKI 64
                    59********999****************99999986 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.6
  F_actin_bund_C 10 qkrareakmkeLea 23
                     kr+re+ m++L+ 
      KHJ32798.1 77 AKRNREKVMNNLQV 90
                    79999999999985 PP

>> CtsR_C  CtsR C-terminal dimerization domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   5.4e-05      0.16       6      36 ..      31      60 ..      26      63 .. 0.85
   2 ?   -1.1   0.0      0.71   2.1e+03      38      47 ..     199     208 ..     197     212 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 5.4e-05
      CtsR_C  6 leilinsigdsiseqdaeaiiqrLleeglit 36
                le++++s+  s+++ +a++++q Ll+e+li+
  KHJ32798.1 31 LEKIMQSVA-SVNQMQAKDYLQALLDENLIH 60
                567778885.5******************97 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.71
      CtsR_C  38 rEakLmkaal 47 
                 r a++m+a+ 
  KHJ32798.1 199 RQAEIMHAMC 208
                 7788999886 PP

>> TFIIE_beta  TFIIE beta subunit core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.6   0.00013      0.38       4      44 ..      11      52 ..       9      66 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00013
  TFIIE_beta  4 qLakiveylKkkdgplsleeIlsylslqldls.dknwlllea 44
                +L k+ eylK++ +  +l+e+++ ++   +++  + ++ l+a
  KHJ32798.1 11 KLSKVLEYLKSTMEVFTLKELEKIMQSVASVNqMQAKDYLQA 52
                799***********9999999888886333333223333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1099  (0.0612973); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1552.16
//
Query:       KHJ32799.1  [L=431]
Description: putative cbs domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.01   16.1   0.3      0.027   14.7   0.2    1.7  1  KleE      Uncharacterized KleE stable inheritance protein


Domain annotation for each model (and alignments):
>> KleE  Uncharacterized KleE stable inheritance protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.2   1.5e-06     0.027      55      95 ..     231     274 ..     223     278 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.5e-06
        KleE  55 vlkwvlsid..vlfqflrmlyhwntpgvh.agwtflahfavltl 95 
                 +  w l id    fq lrml +wn   v   +  +l+hf vltl
  KHJ32799.1 231 IKAWSLCIDekKSFQVLRMLRFWNHWEVTpKSLEYLLHFPVLTL 274
                 4568888873357*************99835789********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      259  (0.0144459); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 3127.94
//
Query:       KHJ32800.1  [L=325]
Description: putative hsp40p co-chaperone [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-06   26.9   1.0    3.8e-06   26.9   1.0    2.0  2  DnaJ      DnaJ domain


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   1.0   2.1e-10   3.8e-06      18      63 .]      86     139 ..      72     139 .. 0.82
   2 ?   -2.6   0.1      0.36   6.4e+03      26      40 ..     306     320 ..     300     324 .. 0.69

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 2.1e-10
                 HHHHHHHHHHHSTTTSCCHHHHHH........HHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  18 kkaYrklalkyHPDknpkdpeaee........kFkeineAyevLsdpekRkqYD 63 
                 k+++++l++ yHPD+ + ++e ++        +++ + +A ++L dp kR++YD
  KHJ32800.1  86 KQRFYELVKLYHPDRYELNSEVSKlssetrleRYRLVVAANNILADPVKRNAYD 139
                 789***********885555444444455666*********************9 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.36
                 HHHSTTTSCCHHHHH CS
        DnaJ  26 lkyHPDknpkdpeae 40 
                  +y P ++++++++e
  KHJ32800.1 306 EEYKPNNHSNNQKNE 320
                 678999886666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       689  (0.0384294); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2245.93
//
Query:       KHJ32801.1  [L=111]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.15   12.2   0.4       0.35   11.1   0.1    1.6  2  HisG_C    HisG, C-terminal domain


Domain annotation for each model (and alignments):
>> HisG_C  HisG, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   1.9e-05      0.35      11      50 ..       8      47 ..       4      51 .. 0.90
   2 ?   -1.6   0.0      0.17   3.1e+03      23      36 ..      78      92 ..      70     106 .. 0.53

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 1.9e-05
                EEGGGHHHHHHH---SSS-EEEE-.SS-EEEEEEEEECCC CS
      HisG_C 11 vpkesleevlkilPGlrsPTvspladegwvaVsavveeke 50
                 pk+  + v+++ ++l +PT+++ +++++ ++++v ++++
  KHJ32801.1  8 LPKDTWATVTSRAAALPHPTIAHTHNNQVNQIKTVQNREQ 47
                699999**************************99988776 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.17
                ---SSS-EEEE-..S CS
      HisG_C 23 lPGlrsPTvspla.d 36
                 +G+ +  ++ ++  
  KHJ32801.1 78 RAGVAASAIAAIYsV 92
                455555555555533 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.28s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 794.62
//
Query:       KHJ32802.1  [L=769]
Description: putative arginine rich protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.3e-22   77.8   0.2    8.3e-22   77.8   0.2    3.2  4  COMPASS-Shg1  COMPASS (Complex proteins associated with Set1p


Domain annotation for each model (and alignments):
>> COMPASS-Shg1  COMPASS (Complex proteins associated with Set1p) component shg1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   0.2   4.6e-26   8.3e-22       2     101 ..      35     136 ..      34     137 .. 0.98
   2 ?   -5.8   5.2         1   1.8e+04      45      76 ..     179     210 ..     153     245 .. 0.54
   3 ?   -3.8   1.7         1   1.8e+04      38      59 ..     259     280 ..     225     314 .. 0.62
   4 ?   -1.2   0.5      0.19   3.4e+03      42      76 ..     441     473 ..     416     512 .. 0.68

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 4.6e-26
  COMPASS-Shg1   2 LveefKkkGeFDklRkeiledfkeseaeqnlrkkveeivesevkkdp.sllfknrgkaaaliegeidrsdvykkleegvdrivdqdlq.eepklrei 96 
                   L+++fKkkG +D+lRk+i++d+ +   e++l++++ + +e e++k+  +ll k r  a+ali+g+++r +vy ++e+++d+++d+++  +e+ +r+i
    KHJ32802.1  35 LAHTFKKKGGYDSLRKQIWDDLMKTSFETKLTESLVKAAEIELEKNDyDLLKKSRSAAQALIHGAVERAGVYCDAEQQIDALIDSHIAeIENGIRNI 131
                   89*********************************************************************************************** PP

  COMPASS-Shg1  97 ikeei 101
                   +k+++
    KHJ32802.1 132 RKNDV 136
                   **997 PP

  == domain 2  score: -5.8 bits;  conditional E-value: 1
  COMPASS-Shg1  45 kkdpsllfknrgkaaaliegeidrsdvykkle 76 
                   +  ++   ++++ka+a++e+  ++ +  +k+e
    KHJ32802.1 179 AAIEEKQREEQKKAQAELEKRTIEREARRKAE 210
                   33333333444455555554444444333333 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 1
  COMPASS-Shg1  38 eivesevkkdpsllfknrgkaa 59 
                   +  +++v +d++   k++++ +
    KHJ32802.1 259 QEKKEQVRRDQERKEKEKEQKE 280
                   3334455555555555554444 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.19
  COMPASS-Shg1  42 sevkkdpsllfknrgkaaaliegeidrsdvykkle 76 
                     v+kd++l +  r+  ++++++e  r+  +++ e
    KHJ32802.1 441 IRVSKDRELKSS-RRNSREQLRNERSRN-GLQECE 473
                   578899999999.888899999998884.455444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (769 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3080  (0.171789); expected 358.6 (0.02)
Passed bias filter:                      720  (0.0401584); expected 358.6 (0.02)
Passed Vit filter:                       456  (0.0254337); expected 17.9 (0.001)
Passed Fwd filter:                       131  (0.0073066); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 2.92u 0.41s 00:00:03.33 Elapsed: 00:00:00.68
# Mc/sec: 3432.44
//
Query:       KHJ32803.1  [L=92]
Description: putative nadh-ubiquinone oxidoreductase 14 kda [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.24s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 733.91
//
Query:       KHJ32804.1  [L=468]
Description: putative delta subunit of the translation initiation factor eif2b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-70  236.8   0.5    3.7e-70  236.3   0.5    1.2  1  IF-2B     Initiation factor 2 subunit family


Domain annotation for each model (and alignments):
>> IF-2B  Initiation factor 2 subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.3   0.5   2.1e-74   3.7e-70       2     282 .]     165     453 ..     164     453 .. 0.97

  Alignments for each domain:
  == domain 1  score: 236.3 bits;  conditional E-value: 2.1e-74
                 S-SHHHHHHHHHHHHHHHHHHCCCSTHHHH.....HHHHHHHHHHHHTSSTS-HHHHHHHHHHHHHHHCCTTTSSHHHHHHHHHHHHHHHHHH.HHHHH CS
       IF-2B   2 vrGspaiaiaalevllevikdaktskvaeL.....keelrkaidlLkkarPtavslgnairrllkeiselksssdvkeakksliekikelike.ieead 94 
                 v Gs a+ +a l+++++vi+ ++t+ ++ L     ++ l+ +id+L ++rP ++s+gn i +l++ i+++++ +++ +akk l++ i+ +i+  +  ad
  KHJ32804.1 165 VCGSCARLVAFLQAMKKVISSYTTPPMNSLtrhfsSSVLSTQIDYLSSCRPISISMGNTISWLKRIIAKIDPGTSDADAKKMLCDSIDVFIQTrVTLAD 263
                 66999****************************9999*******************************************************999**** PP

                 HHHHHHHHTTC-TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEEEXTTTTHHHTHHHHHHHTTXEEEEEEGGGHHHHHHCTESEEEEEXSEEETTSEE CS
       IF-2B  95 ekigdiaaelikdgdtilTicnsktvlevlraaakekkkfkVivvEsrPrlqGrltakeLvqagipvtlitdsavayvmseevdkvivGAdrilenGai 193
                 ++i+d+  +li dgd+i+T ++s++v + l +a + +k f+V+ v+srP  +G+ +a  L + gi++++ + + +++ ++  v+kv++GA++++ nG +
  KHJ32804.1 264 QAISDNIVKLIRDGDVIMTFAKSNVVQKALFQAFQRGKVFSVVIVDSRPLHEGKSLAAALIKFGINTKYCLLNGLSHNIRD-VTKVFLGAHAMMGNGRL 361
                 *********************************************************************************.***************** PP

                 EEETTHHHHHHHHHHTTXEEEEEXXGGGBESTSSSGGGSSXXBEXTHHHHEETTEESSTT...TEEEEEBSEEEEEGGGXSEEEETTEEEXC CS
       IF-2B 194 ankiGTsslAvlAkefnipvlvvaeslkfservqldedifieerdpeellnitgeriaee...elkvvnpafDvtPpelItliITevGvlpp 282
                 ++++GT+ +A+ A+ ++ pv+v +e++k++erv+ld+ + +e  +++el+  +g     +   +l+v n+++DvtP+e+I++i+Te+G +pp
  KHJ32804.1 362 FSRVGTAIVAMEANDADKPVIVLCETIKLTERVALDSIVHNEVTPADELVTPNGILQGWQnirNLQVCNIMYDVTPAEYIQMIVTELGNVPP 453
                 **************************************************99986654445559************************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       768  (0.0428356); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.37
# Mc/sec: 3751.90
//
Query:       KHJ32805.1  [L=242]
Description: putative translation initiation factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-08   34.4   0.1    3.1e-08   33.5   0.1    1.5  1  IF3_C     Translation initiation factor IF-3, C-terminal doma
    1.2e-06   28.7   0.0    2.1e-06   27.9   0.0    1.5  1  IF3_N     Translation initiation factor IF-3, N-terminal doma
    0.00045   19.9   1.5     0.0027   17.4   1.5    2.0  1  mIF3      Mitochondrial translation initiation factor
  ------ inclusion threshold ------
       0.12   12.8   0.3       0.29   11.6   0.1    1.7  2  DUF3696   Protein of unknown function (DUF3696)


Domain annotation for each model (and alignments):
>> IF3_C  Translation initiation factor IF-3, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.1   6.9e-12   3.1e-08       3      69 ..     153     220 ..     151     227 .. 0.86

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 6.9e-12
                 EEEEEEESS--HHHHHHHHHHHHHHHHHT-EEEEEEE--S-TT.SHHHHHHHHHHHHHHHTTTTEEEE CS
       IF3_C   3 vKEiklrpkidehDlevKlknarkFLeegdkvKvtlrfrGRei.ahkelgkevleriaeeleevakve 69 
                 +K + ++ ++de+Dl++Kl+++++FLe+g +v + l+ + R      + g+++++ri ++++e +  e
  KHJ32805.1 153 TKTLEISWTVDENDLNIKLRRLKEFLEKGCHVDLFLKAKKRGRpVTLDEGEKIVQRIQNTVKEAGGKE 220
                 6888999***************************999876654134578************9987665 PP

>> IF3_N  Translation initiation factor IF-3, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   4.8e-10   2.1e-06       2      57 ..      73     132 ..      72     145 .. 0.90

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 4.8e-10
                 TTS--SSEEEEE-SSS-EEEEEEHHHHHHHHHHHTSEEEEEESSS....SS-EEEEE-HH CS
       IF3_N   2 NeqIrarevrlvdedGeqlGvistreAlrlaeekgldLVevspna....epPVcrimdyg 57 
                 Ne+I+a+ + +vde+G+  G+ +t++  +  + ++  LV + + +     pP cri d +
  KHJ32805.1  73 NEEITAESITVVDENGKISGPHQTKNFFEDFDLENKSLVTILEGNpedgRPPLCRIYDRS 132
                 *****************99**********************8766666799******976 PP

>> mIF3  Mitochondrial translation initiation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   1.5     6e-07    0.0027     112     168 ..     137     193 ..      75     200 .. 0.88

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 6e-07
        mIF3 112 kklek.kekaekkksslKeikvsWqIsldDLkkQKanEIekllkkgekvliyiddkks 168
                 k++++ k+k + k   +K++++sW + ++DL+  K   +++ l+kg +v ++++ kk+
  KHJ32805.1 137 KEINDlKNKGKIKVIPTKTLEISWTVDENDLN-IKLRRLKEFLEKGCHVDLFLKAKKR 193
                 44444134444455789**************6.6999*****************9997 PP

>> DUF3696  Protein of unknown function (DUF3696)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   6.4e-05      0.29      17      47 ..      72     104 ..      68     109 .. 0.78
   2 ?   -3.8   0.0         4   1.8e+04      28      36 ..     140     149 ..     135     152 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 6.4e-05
     DUF3696  17 kdsaidtevlspiddnGris..nWPeGFFDqae 47 
                 +++ i+ e ++ +d+nG+is     ++FF +++
  KHJ32805.1  72 RNEEITAESITVVDENGKISgpHQTKNFFEDFD 104
                 555666664444********98888****9986 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 4
     DUF3696  28 p.iddnGris 36 
                   ++++G+i+
  KHJ32805.1 140 NdLKNKGKIK 149
                 3478888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       607  (0.0338558); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.36
# Mc/sec: 2000.83
//
Query:       KHJ32806.1  [L=206]
Description: hypothetical protein EV44_g3668 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-05   24.5   0.1    3.7e-05   23.9   0.1    1.3  1  RNase_H   RNase H


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.1   2.1e-09   3.7e-05      98     142 ..      40      86 ..       3      87 .. 0.71

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 2.1e-09
                 HTT.HHHHHHH..HHCHCSSEEEEEE-SCCSSSTHHHHHHHHHHHHHH CS
     RNase_H  98 vkn.kdlaell..kelakkkkvqlkwvkgHaGvpkgNemaDrlAkeaa 142
                 + n +d++++   +++ +  +v ++w++gH  ++ gNe+aD lA++a+
  KHJ32806.1  40 FQNlRDVWHRRthTSVSSTGAVIVRWIPGHVDIT-GNERADALANSAC 86 
                 333444444330034567899************5.**********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1523.91
//
Query:       KHJ32807.1  [L=215]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1663.02
//
Query:       KHJ32808.1  [L=293]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 2365.01
//
Query:       KHJ32809.1  [L=428]
Description: putative pyruvate dehydrogenase protein x component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.2e-19   67.1   0.5      2e-18   66.0   0.5    1.6  1  Biotin_lipoyl    Biotin-requiring enzyme
    1.6e-07   31.6   0.0    4.3e-07   30.2   0.0    1.8  1  E3_binding       e3 binding domain
    1.8e-05   24.4   0.1    0.00013   21.7   0.0    2.3  2  Biotin_lipoyl_2  Biotin-lipoyl like
  ------ inclusion threshold ------
      0.062   12.9   0.1       0.14   11.7   0.1    1.5  1  SMC_ScpB         Segregation and condensation complex subunit
      0.067   13.9   0.0       0.28   11.9   0.0    2.0  1  HlyD_3           HlyD family secretion protein


Domain annotation for each model (and alignments):
>> Biotin_lipoyl  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.0   0.5   5.5e-22     2e-18       2      72 ..      39     111 ..      38     112 .. 0.95

  Alignments for each domain:
  == domain 1  score: 66.0 bits;  conditional E-value: 5.5e-22
                    EEEESSSEEEEEE..ECSESSSTTCEE-TTSEEEEEECTTEEEEEEBSSSEEEEEESSTTTEE.E-TTCEEEE CS
  Biotin_lipoyl   2 eiksPmiGesveeg.vvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdt.vevgdllak 72 
                     +++P+++++++eg ++++ vk+Gd+ +ag+vl+ +e++K++m++ea+++Gv ++i   ++++ ++vg+ + +
     KHJ32809.1  39 NLTMPALSPTMTEGnIAKWNVKEGDSFTAGDVLLQIETDKASMDVEAQDDGVMAKIILGDDSKgIKVGTRIGV 111
                    589********************************************************99999****98876 PP

>> E3_binding  e3 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   1.2e-10   4.3e-07       4      36 .]     178     213 ..     176     213 .. 0.85

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 1.2e-10
                 -HHHHHHHHHCT--TTTS-...--CTTTBE-HHHHC CS
  E3_binding   4 sPaaRklAkelGidLsdvk...GtGpgGRItkeDVl 36 
                  P++ +l++ ++id s++    ++Gp++R++k+DVl
  KHJ32809.1 178 LPSVQHLIRLHNIDQSSIDkitPSGPNNRLLKGDVL 213
                 5************877554444*************7 PP

>> Biotin_lipoyl_2  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   3.6e-08   0.00013      10      37 ..      51      78 ..      44      93 .. 0.89
   2 ?   -1.0   0.0      0.44   1.6e+03      26      33 ..     209     216 ..     204     219 .. 0.85

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 3.6e-08
  Biotin_lipoyl_2 10 sGrVaqlnVkdGqrVkaGdvLaelDsra 37
                      G +a++nVk+G+   aGdvL+++++++
       KHJ32809.1 51 EGNIAKWNVKEGDSFTAGDVLLQIETDK 78
                     799*********************9875 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.44
  Biotin_lipoyl_2  26 aGdvLael 33 
                      +GdvLa l
       KHJ32809.1 209 KGDVLAFL 216
                      8****987 PP

>> SMC_ScpB  Segregation and condensation complex subunit ScpB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1     4e-05      0.14      90     151 ..     267     332 ..     257     339 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4e-05
    SMC_ScpB  90 aiIaykqpvtraeieeiRGvnsdsvvrtLlerglieekgrkee..pgrpilYgtTek..Fleyfgl 151
                 a++ ++qp++ ++i ei  +  + +  +L e++li+++    +  + rp  Y+tT++  F   +g+
  KHJ32809.1 267 AMVILEQPISFENIYEIQKKMKSILGASLSEEKLISRATYLANksVPRPKSYKTTKNelFEAVLGI 332
                 7899*************9999999999**********98755422779*******86335555555 PP

>> HlyD_3  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   7.9e-05      0.28       7      40 ..      51      85 ..      48      88 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.9e-05
      HlyD_3  7 dGvvvelnveegevvqagdelleiipp.dtllvea 40
                 G ++++nv+eg+  +agd+ll+i  + +++ vea
  KHJ32809.1 51 EGNIAKWNVKEGDSFTAGDVLLQIETDkASMDVEA 85
                699*********************97634555665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (428 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 3069.77
//
Query:       KHJ32810.1  [L=376]
Description: putative snare complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.4e-14   51.4   0.0    1.6e-13   50.7   0.0    1.4  1  PX         PX domain
  ------ inclusion threshold ------
       0.18   11.5   1.1       0.38   10.5   1.1    1.5  1  Hormone_1  Somatotropin hormone family
        0.4   11.2   5.1        1.6    9.2   5.5    1.8  2  DUF16      Protein of unknown function DUF16


Domain annotation for each model (and alignments):
>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.0   2.6e-17   1.6e-13       9     111 ..      12     115 ..       3     117 .. 0.87

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 2.6e-17
                 EEEEEETTSSEEEEEEEEEETTSSSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHHTSCHHHH..SHH CS
          PX   9 leretsgskkhsyylyevelktgakewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrn..sev 105
                 +++  + s ++ ++ly+++l+   +++ +++rYsdF++L+  L+++       plP+k++f s ++ +++ +e rrkgLe yL+ +++ +  r   ++v
  KHJ32810.1  12 TTVSHDVSTSKPFTLYNITLRLPLRTFVIQKRYSDFVSLNAALTSTVSVPPPVPLPGKSWFTS-TAGSPKLTEARRKGLELYLRAIAESSDTRWqeTSV 109
                 3333337999**************************************888889*******97.9*********************9998877666999 PP

                 HHHHHH CS
          PX 106 lteFLe 111
                  + FL+
  KHJ32810.1 110 WRNFLN 115
                 999986 PP

>> Hormone_1  Somatotropin hormone family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.1   6.4e-05      0.38      81     157 ..     295     371 ..     291     376 .] 0.91

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 6.4e-05
                 -----------HHHHHHHHHHHHTTTTGGGGGG....GGGSSS------TTTGGGHHHHHHHHHHHHHHHH------ CS
   Hormone_1  81 enrekaqqtsneeLlklslllleswkePLkhlvtelssmkevsetilskakeieeklkeLlegierilskvevpver 157
                 ++ e+++q +ne  l+l   ++e+ ++ +++l++ ++  ke+  +i    +  +e+lk++ +g+ r+ +k+ev  +r
  KHJ32810.1 295 HETENTRQLDNEGVLQLQREMMETQDQEVNELAKIVRRQKEMGIAIYNELELQNEMLKKVDDGVDRVGKKIEVAKKR 371
                 57899*******************************************************************64443 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0         3   1.8e+04      17      29 ..      36      48 ..      29      54 .. 0.73
   2 ?    9.2   5.5   0.00027       1.6      32     101 ..     305     374 ..     290     376 .] 0.85

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 3
                TTB-BHHHHHHB- CS
       DUF16 17 teYVTrkqlnefk 29
                  +V +k + +f 
  KHJ32810.1 36 RTFVIQKRYSDFV 48
                5689999998887 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00027
                 BHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHH CS
       DUF16  32 nkqrLkkieakvdklgeqinkleqkvekqgekikelkveqkaqgeelnkvdetleliletLqkinkRlDs 101
                 n+  L+   + ++++++++n+l+++v++q e    + +e + q+e l+kvd+ ++ + + ++  +kR  +
  KHJ32810.1 305 NEGVLQLQREMMETQDQEVNELAKIVRRQKEMGIAIYNELELQNEMLKKVDDGVDRVGKKIEVAKKRANK 374
                 555555556677899999***********999889999************************99999766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       770  (0.0429472); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2714.93
//
Query:       KHJ32811.1  [L=781]
Description: hypothetical protein EV44_g0174 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-96  321.4  11.1    1.6e-83  279.8   4.6    2.8  2  Pectate_lyase_3  Pectate lyase superfamily protein
    7.4e-08   32.0   2.0     0.0087   15.7   0.2    3.3  3  End_N_terminal   N terminal extension of bacteriophage endosi


Domain annotation for each model (and alignments):
>> Pectate_lyase_3  Pectate lyase superfamily protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  279.8   4.6   1.8e-87   1.6e-83       1     215 []      66     290 ..      66     290 .. 0.97
   2 !   44.7   0.5   1.5e-15   1.4e-11       3     126 ..     420     533 ..     418     557 .. 0.76

  Alignments for each domain:
  == domain 1  score: 279.8 bits;  conditional E-value: 1.8e-87
                      SEEGGGGT---EEEEE-HHHHHHHH..............HTSS-EEE-SEEEEESS-EEE-SSEEEEES-TTTEEEEE-TT-SS--SEEES-TT CS
  Pectate_lyase_3   1 frnVkdyGakgDGvtDdtaaiqkais........casatttgavVYfPaGtYlvsspiilksgvqLvGdgngrpvlkaaaafvgaglidgdpyv 86 
                      +rnVkd+GakgDGvtDdt ai++ai+        c+s+t t+a+VYfP+GtY+vs+pii+++++qLvGd+   p lkaa++f+g ++id+dpy 
       KHJ32811.1  66 YRNVKDFGAKGDGVTDDTSAINAAITqgnrcgkgCDSSTLTPALVYFPPGTYIVSRPIIQYYYTQLVGDAISHPKLKAAPGFTGIAVIDSDPYE 159
                      69***********************99******************************************************************* PP

                      T-..-EEEEEEEEEEEGGGG-SS---SSEEE.ES-EEEEEEEEEEES-SSEEE-SSS..---TT---SS--EEEEES-EEES-SS-SEEES-EE CS
  Pectate_lyase_3  87 sggsealiatnnfyrqirnlkiditavapga.tgihwqtaqatslenvefemseasg..tkhqgifiengsggflndlvfsglgdigiavgnqq 177
                      ++gs++++++nnf+rq+rn+ id+ta++p+  ++ihwq+aqatsl+n++f+m+++ g   +++gif++ngsggf++dl+f+g g++g+ +gnqq
       KHJ32811.1 160 NDGSNWYTNQNNFFRQVRNFEIDVTALPPDRgACIHWQVAQATSLQNIIFRMRTDGGssLQQVGIFMDNGSGGFMSDLIFYG-GKYGAFFGNQQ 252
                      8899***********************7777578**********************9855555*******************.*********** PP

                      EEEES-EEE-S--SEEE-TT-EEEEEEEEEESSSEEEE CS
  Pectate_lyase_3 178 ftvrnitfnnattgievlwgwgwtlknvkinncegGid 215
                      +t+rn+ fnn++t+i ++w+w+wtl++++i+n++ Gid
       KHJ32811.1 253 YTTRNLIFNNCQTAIFMNWNWAWTLSGITISNAGIGID 290
                      ************************************96 PP

  == domain 2  score: 44.7 bits;  conditional E-value: 1.5e-15
                      EGGGGT---EEEEE-HHHHHHHH......HTSS-EEE-SEEEEESS-EEE-SSEEEEES-TTTEEEEE-TT-SS--SEEES-TTT-..-EEEEE CS
  Pectate_lyase_3   3 nVkdyGakgDGvtDdtaaiqkaiscasatttgavVYfPaGtYlvsspiilksgvqLvGdgngrpvlkaaaafvgaglidgdpyvsggsealiat 96 
                      +Vk  GakgDG tDdtaaiq+      +   ++vVYf  G Y+v+++i+ +++++++G+    p + a + + ++++  +  ++ g +++ +  
       KHJ32811.1 420 SVKNAGAKGDGITDDTAAIQALF---NSVGPNDVVYFDHGAYVVTNTIRVPKEIKITGEI--WPLIMAGGTAFKDATRPTPVFQVG-QPGDVGH 507
                      89******************999...9999****************************98..444444444434444434444422.2333333 PP

                      EEEEEEGGGG-SS---SSEEEES-EEEEEE CS
  Pectate_lyase_3  97 nnfyrqirnlkiditavapgatgihwqtaq 126
                          ++i++l++ + +++pga  i+w++aq
       KHJ32811.1 508 ----VEITDLIFETIGAQPGAVMIQWNVAQ 533
                      ....45777777777777777777777666 PP

>> End_N_terminal  N terminal extension of bacteriophage endosialidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.2   9.7e-07    0.0087       1      20 [.      74      93 ..      74     109 .. 0.83
   2 !   13.4   0.1   5.2e-06     0.046       1      22 [.     426     447 ..     426     463 .. 0.84
   3 ?   -0.3   0.0     0.096   8.6e+02      33      58 ..     497     522 ..     493     526 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 9.7e-07
                    ---EEEEE-HHHHHHHHHHS CS
  End_N_terminal  1 akGDGvtdDtdalsevlaaa 20
                    akGDGvtdDt+a+++++++ 
      KHJ32811.1 74 AKGDGVTDDTSAINAAITQG 93
                    89*************99874 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 5.2e-06
                     ---EEEEE-HHHHHHHHHHS-T CS
  End_N_terminal   1 akGDGvtdDtdalsevlaaapv 22 
                     akGDG+tdDt+a+++++++   
      KHJ32811.1 426 AKGDGITDDTAAIQALFNSVGP 447
                     89*************9998654 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.096
                     EEESS---GGGEES-EEEE-SSTT-- CS
  End_N_terminal  33 ykvssLPDisrfknarfvyeRiaGqP 58 
                     ++v +  D+ +   +  ++e i  qP
      KHJ32811.1 497 FQVGQPGDVGHVEITDLIFETIGAQP 522
                     78888899999999***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (781 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 5469.31
//
Query:       KHJ32812.1  [L=250]
Description: putative microtubule associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-16   60.6   0.6    1.2e-16   60.6   0.6    1.8  2  EB1             EB1-like C-terminal motif
    2.9e-07   30.7   0.6    5.2e-07   29.8   0.6    1.4  1  CH              Calponin homology (CH) domain
  ------ inclusion threshold ------
      0.029   14.4   0.1      0.064   13.3   0.1    1.6  1  Suppressor_APC  Adenomatous polyposis coli tumour suppressor 
      0.059   13.5   0.1      0.096   12.8   0.1    1.3  1  CH_2            CH-like domain in sperm protein
      0.086   12.9   0.0         19    5.4   0.0    2.5  2  IFP_35_N        Interferon-induced 35 kDa protein (IFP 35) N-


Domain annotation for each model (and alignments):
>> EB1  EB1-like C-terminal motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       2.3   8.3e+03      15      30 ..      80      93 ..      79      96 .. 0.57
   2 !   60.6   0.6   3.4e-20   1.2e-16       1      41 []     174     230 ..     174     230 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.3
                HHHHHHHTT----HHH CS
         EB1 15 IEilcqtepeleedlp 30
                +E+l++   + +++l+
  KHJ32812.1 80 VELLIK--CKMQDNLE 93
                899983..34444455 PP

  == domain 2  score: 60.6 bits;  conditional E-value: 3.4e-20
                 HHHHHHHHHHHHHHHHHHHHH......TT----HHH.................HHHHHHHHHS- CS
         EB1   1 LekERdFYFsKLRdIEilcqt......epeleedlp.................ivkkikkILYa 41 
                 Le+ERdFYFsKLRdIEil+q+              p                 ++++i++ILY+
  KHJ32812.1 174 LERERDFYFSKLRDIEILVQQadedeaF-------PdkdkedetnggtekidgLIQQIQTILYS 230
                 8*******************96655550.......344455555667777777**********7 PP

>> CH  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.6   1.4e-10   5.2e-07       2      98 ..       3      96 ..       2     105 .. 0.85

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 1.4e-10
                HHHHHHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT...HHHHHHHHHHHHHHHHHHTTCHTTSS-HHHHHT...TSHHHH CS
          CH  2 eqkkellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnks...efkkleNinlaldvaekklgvpkvlieaedlve...gknksv 96
                e+++el++W+n+ l  ++ kv      e++ +G +Lc+++++++++  +++k++++   e+ +l+N++  l+ +  + g+++   ++e l++    +n ++
  KHJ32812.1  3 ESRQELVAWLNNLLSLNITKV------EQCGTGAALCQVFDSIYQDI-PMSKVKFNvntEYAYLQNFK-ILQNCFTRHGIERPI-NVELLIKckmQDNLEF 94
                6799**********9998888......8***************9965.9999998899**********.7777999******99.9999999554444455 PP

                HH CS
          CH 97 lt 98
                l+
  KHJ32812.1 95 LQ 96
                55 PP

>> Suppressor_APC  Adenomatous polyposis coli tumour suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   1.8e-05     0.064       9      41 ..     158     190 ..     156     231 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.8e-05
  Suppressor_APC   9 keLeqekdlLlqgLeaveraRdWylqqlrevqe 41 
                      +L+qe  +L    + +er+Rd y ++lr+++ 
      KHJ32812.1 158 SALQQENAALKDTVQGLERERDFYFSKLRDIEI 190
                     689*************************99754 PP

>> CH_2  CH-like domain in sperm protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   2.7e-05     0.096       1      72 [.       8      77 ..       8      97 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.7e-05
        CH_2  1 llkWlqs.ldlsrsvknlkrdfsdGvlvAeilkkyypklvdlhnys.ngsslaaklnNWetLekvlkklgikls 72
                l++Wl++ l+l+ ++    +++  G ++ +++  +y+  + +++ + n ++  a l+N+++L+  ++++gi+ +
  KHJ32812.1  8 LVAWLNNlLSLNITKV---EQCGTGAALCQVFDSIYQD-IPMSKVKfNVNTEYAYLQNFKILQNCFTRHGIERP 77
                579****888887777...89***************99.7887766255666688**************99854 PP

>> IFP_35_N  Interferon-induced 35 kDa protein (IFP 35) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0    0.0091        33      32      45 ..      39      52 ..      29      62 .. 0.88
   2 ?    5.4   0.0    0.0053        19       2      22 ..     157     177 ..     157     182 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0091
    IFP_35_N 32 ikediPetKikfts 45
                i +diP  K+kf +
  KHJ32812.1 39 IYQDIPMSKVKFNV 52
                789*********87 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0053
    IFP_35_N   2 iaeitkeniqLkeeiqkLeaE 22 
                 i+ +++en  Lk+ +q Le E
  KHJ32812.1 157 ISALQQENAALKDTVQGLERE 177
                 6789**************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       678  (0.0378158); expected 358.6 (0.02)
Passed bias filter:                      573  (0.0319594); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 1936.81
//
Query:       KHJ32813.1  [L=320]
Description: hypothetical protein EV44_g3032 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       753  (0.041999); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.37
# Mc/sec: 2575.09
//
Query:       KHJ32814.1  [L=170]
Description: hypothetical protein EV44_g3611 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-13   50.9   3.0    1.6e-13   50.5   3.0    1.2  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type
  ------ inclusion threshold ------
      0.013   15.9   0.4       0.74   10.3   0.1    2.4  3  DUF150           RimP N-terminal domain


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   3.0   1.8e-17   1.6e-13       3     124 ..      46     169 ..      44     170 .] 0.95

  Alignments for each domain:
  == domain 1  score: 50.5 bits;  conditional E-value: 1.8e-17
  Retrotran_gag_2   3 kkdakalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsa..lgvkiddedkv 94 
                       ++a+a+++I++s++ ++   ++++ +a +++d+Lk+ ye k++a   +l+ + f+ +  +++sv+d ++   +l +++++   ++ki+d  +v
       KHJ32814.1  46 FQHAQAFKMILQSVDINNKVAIQSCRKASDAYDTLKSRYEMKDTALLSQLLTQIFTVQSMKQSSVTDKYDLKINLTTQIAEqqPDAKIPDIVQV 139
                      5789*******************************************************************9*******8744689******** PP

  Retrotran_gag_2  95 vllLasLPesyetfvtaiesseedltleev 124
                      v+l++sL ++y+t   ++ s+e+ +t++ev
       KHJ32814.1 140 VILMRSLASEYDTTLEILTSKEKFPTVNEV 169
                      ***************************998 PP

>> DUF150  RimP N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   8.2e-05      0.74       7      48 ..      35      76 ..      32      80 .. 0.85
   2 ?    3.6   0.0    0.0096        86      34      67 ..      81     118 ..      76     119 .. 0.84
   3 ?   -3.6   0.0       1.7   1.6e+04      24      39 ..     151     166 ..     146     168 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 8.2e-05
      DUF150  7 eslglelvdvelskegrgrvlriyidkdggvtlddcekvSra 48
                 +l++el + e++ ++  +++   +d +++v ++ c k S a
  KHJ32814.1 35 HKLDVELEEYEFQHAQAFKMILQSVDINNKVAIQSCRKASDA 76
                57899*******99877655555***************9976 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.0096
      DUF150  34 dggvtlddcekvSraisalLdv....edpieeeYtLEV 67 
                 +++ ++ d + +S+ +++++ v    + +++++Y L +
  KHJ32814.1  81 KSRYEMKDTALLSQLLTQIFTVqsmkQSSVTDKYDLKI 118
                 5678899*************998887788899999975 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 1.7
      DUF150  24 grvlriyidkdggvtl 39 
                 + +l+i   k++  t+
  KHJ32814.1 151 DTTLEILTSKEKFPTV 166
                 5577777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (170 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1369.23
//
Query:       KHJ32815.1  [L=396]
Description: hypothetical protein EV44_g3223 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.2e-07   29.2   2.3    1.1e-06   28.4   2.3    1.4  1  zf-CCHC    Zinc knuckle
     0.0088   15.9   1.3      0.023   14.5   1.3    1.8  1  zf-CCHC_6  Zinc knuckle
  ------ inclusion threshold ------
       0.09   12.8   1.1       0.17   11.9   1.1    1.4  1  zf-CCHC_3  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   2.3   1.8e-10   1.1e-06       2      18 .]     277     293 ..     276     293 .. 0.94

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 1.8e-10
                 CTSSSSSSSSTTTTSTS CS
     zf-CCHC   2 kCynCGepGHiardCpk 18 
                  Cy+C e+GH++++Cpk
  KHJ32815.1 277 RCYKCKEMGHFSSNCPK 293
                 7***************7 PP

>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   1.3   3.9e-06     0.023       1      34 [.     275     306 ..     275     311 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.9e-06
   zf-CCHC_6   1 rvKCknCGAFGHtarSkrCPmkcwngalvpqplg 34 
                 +v+C +C   GH    + CP ++ +g+ v q  g
  KHJ32815.1 275 KVRCYKCKEMGHFS--SNCPKRSKKGVNVTQNSG 306
                 89**********86..88***********99876 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.1   2.8e-05      0.17       2      23 ..     273     295 ..     272     306 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.8e-05
   zf-CCHC_3   2 nasaaCQkClkkGHwtYECkn.a 23 
                 n++++C kC + GH++  C++  
  KHJ32815.1 273 NKKVRCYKCKEMGHFSSNCPKrS 295
                 7899***************9642 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (396 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       856  (0.0477439); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2746.50
//
Query:       KHJ32816.1  [L=536]
Description: putative regulatory factor sgt1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-86  290.4  20.5    4.2e-82  276.5   0.5    2.0  2  SGT1      SGT1 protein
     0.0046   16.9   0.9       0.77    9.7   0.0    3.1  3  BORCS8    BLOC-1-related complex sub-unit 8


Domain annotation for each model (and alignments):
>> SGT1  SGT1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  276.5   0.5   4.6e-86   4.2e-82       1     301 [.      36     345 ..      36     361 .. 0.90
   2 !   17.7  14.5   1.1e-07     0.001     379     508 ..     372     520 ..     347     534 .. 0.69

  Alignments for each domain:
  == domain 1  score: 276.5 bits;  conditional E-value: 4.6e-86
        SGT1   1 veYklflkqedssdkekeeeklqelleeilakvapllveYiWqkdpFnLkvrtekgdlpahlgGvtkfGdnieDEWFiVyLlkeitkefpelvarvedn 99 
                 veY+l++ ++  +++++ ++  + +l++ l++ ++ll+++iW  d+F+L++++ ++++   l+Gvt+fGd++eDEW iVy+lke++ +fp+l ++v d 
  KHJ32816.1  36 VEYSLYVIDSMLKTQDEVRNVCEVILRKSLEITKQLLEDHIWSCDSFKLEIQEDNDKI--YLHGVTNFGDSLEDEWLIVYILKELSVQFPQLWIQVVDV 132
                 89******9999*9**************************************976665..799************************************ PP

        SGT1 100 dgeflLieaaevlPkWlnPdtsenrvfiykGelhiipkssk...sseve..lkakepslsqalellsknpeetlasesiqsaikkrlkgYpekikeslh 193
                 dgeflLieaa+ lP+WlnP+ ++nrv+i++++l +ip +++   s+ ++    + +++ls++l++++knp ++++   +++    rl++Yp +i eslh
  KHJ32816.1 133 DGEFLLIEAANALPRWLNPEIADNRVWIHNNKLYLIPLHATgclSEPLKksPISRSLKLSESLQIIEKNPVALICPPLVEKEAFYRLRNYPSQISESLH 231
                 *************************************998722223333324456789***************************************** PP

        SGT1 194 rahvyvPasvaavLkqrPsLvapAVqaFylRdpvdlkacrt...mktFppetrvltsvtftrclYAqLvqqkftpdkrsgyklpsr..sdpe.ykaael 286
                  a +++P ++a++L++ P L +p+V+aFylRdp++lk++++      Fppe+ v ++ +ft+  +AqL  q+f+++     kl ++  +d++ y++ +l
  KHJ32816.1 232 YALIQIPRRLAYILQRLPALTSPSVEAFYLRDPISLKYIKNdpsKFLFPPEDLVKMTTKFTKLRFAQLKSQEFQAPLSWEKKLQDAkkNDENsYEQLKL 330
                 ***************************************973323469****************************98666698764334447****** PP

        SGT1 287 GmklAhGfEiLcska 301
                 Gmkl +G+EiL++ +
  KHJ32816.1 331 GMKLTCGVEILMKDS 345
                 ***********9765 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 1.1e-07
        SGT1 379 eleleelkkeeeelppedddsWLeiseeeLdkllqeragekelveesskeeeasydleevtksmkaFld.kvSsheGaelPe................. 459
                 + ++e l  +e+   +ed+++W++i+  + ++ l  ++g k+l  +   + +++ dl++++++ ++Fl+ + ++ +G+el +                 
  KHJ32816.1 372 PSDVELLCWNEK--FREDNENWMKIDFRDFERELDGKSGGKNLG-SGFGDAKTQADLKKMVERFESFLNdEKAGPDGIELDDmdidddqksfedkssdd 467
                 455555554443..689**********************99988.788899999**************7357899*****5555555555555556666 PP

        SGT1 460 ...skeekevsfdvdsflkalekllgskieeeldsddld.edssedsdeedee 508
                    ++++k++sfd+++f+  +++++++  +  ++++    +d +e++++ ++ 
  KHJ32816.1 468 ssdEDQNKDLSFDSNEFSRIIKEIIENPLNSIESDSQSAiNDAKEMKETIEQM 520
                 66588889999999999999999998774333222111122222222222222 PP

>> BORCS8  BLOC-1-related complex sub-unit 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0   8.6e-05      0.77      56     100 ..      26      72 ..      15      78 .. 0.79
   2 ?   -3.2   0.0       0.9     8e+03      19      30 ..     267     278 ..     266     279 .. 0.78
   3 !    4.2   0.1    0.0046        41      67      92 ..     502     527 ..     483     535 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 8.6e-05
      BORCS8  56 eelqgacyd.veyaisavksikesessf.eniqelLknsiflkqqlk 100
                 +el++  +d vey++  + s+ ++++++ + ++ +L++s+++ +ql 
  KHJ32816.1  26 RELRNTREDyVEYSLYVIDSMLKTQDEVrNVCEVILRKSLEITKQLL 72 
                 55555555548*****************55566689******99985 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.9
      BORCS8  19 ihilaNePSlal 30 
                 ++++ N+PS  l
  KHJ32816.1 267 LKYIKNDPSKFL 278
                 6899****9655 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.0046
      BORCS8  67 yaisavksikesessfeniqelLkns 92 
                 ++ sa++  ke+++++e++++ L++s
  KHJ32816.1 502 DSQSAINDAKEMKETIEQMEKELRES 527
                 7889999999999999****999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1461  (0.0814881); expected 358.6 (0.02)
Passed bias filter:                      639  (0.0356406); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.42
# Mc/sec: 3821.36
//
Query:       KHJ32817.1  [L=403]
Description: putative caspase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.3e-64  216.8   0.2    7.8e-64  216.0   0.0    1.5  2  Peptidase_C14  Caspase domain
  ------ inclusion threshold ------
          1    9.3   0.0          1    9.3   0.0    3.1  5  Raptor_N       Raptor N-terminal CASPase like domain


Domain annotation for each model (and alignments):
>> Peptidase_C14  Caspase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1      0.68   6.1e+03     228     244 ..      63      79 ..      57      80 .. 0.79
   2 !  216.0   0.0   8.7e-68   7.8e-64       1     246 [.     110     398 ..     110     400 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.68
                    CTTSBEEEEEEEEESSS CS
  Peptidase_C14 228 kngykqrPglssndltk 244
                    +n   qrP+++ n +++
     KHJ32817.1  63 QNWDNQRPNMYHNGNFR 79 
                    46678*******99886 PP

  == domain 2  score: 216.0 bits;  conditional E-value: 8.7e-68
                    EEEEEEECSTTSSTCC-STTHHHHHHHHHHHHHHHTTEEEEEEEGGEES.......-CHHHHHHHHHHHHCHSGGTTESEEEEEEESEEET..... CS
  Peptidase_C14   1 kkAliIginnYpgtkaeLrGcanDaermaklLvkrlgFevenililtdd.......ptgknirkalkwlvksadhspgDslvvhysGHGtrvpae. 88 
                    +kAl+Igin Y g+k +LrGc+nD+++m+++L +r+g++ e+++iltdd       pt++ni++a++wlvk+a+  p+Dsl++h+sGHG+++++  
     KHJ32817.1 110 RKALLIGIN-YFGQKGQLRGCINDVKNMSEFLSQRYGYKSEDMVILTDDqhnsvcqPTKANILRAMHWLVKDAQ--PNDSLFFHFSGHGGQTKDLd 202
                    79*******.997888**********************************************************..**************877778 PP

                    .........EEECTTC..SSEEEHHHHHHTTSTTTHGGGTTS-EEEEEESES.SSBCBEEEEEEES-SSS.......................... CS
  Peptidase_C14  89 .........civpvdv..nsliqdddirdlfggdklpslagkpktiiidaCr.gglldkgiekdtsptnk.......................... 146
                             +i+pvd+   ++i ddd+++++ +++l++++  ++t+i+d+C+ g++ld ++  +t    k                          
     KHJ32817.1 203 gdeedgydeVIYPVDFrrAGHIVDDDMHNIL-VRPLLAGV--RLTAIFDSCHsGTALDLPYVYSTQGVLKepnlakeasmgllgalvsytqgdlvg 295
                    99***************99999999999999.9*******..******************9999999999999999******************99 PP

                    ........HCCCHCHHHHHHCSHHCEEECTTTSEEEEESSSTTBSCEEETTTEE...HHHHHHHHHHHHHTTTSBHHHHHHHHHHHHCCTTTCTTS CS
  Peptidase_C14 147 ........feedssskekkpekqslsklpseadvlllsgcqddqtSadgsengs...aftqalqkvleekggkislkellnkvrkrlkslkkkngy 231
                              ++++  e+ + ++   + +s+adv++ sg++ddqtSad++   +   a+++a++++++++ + +s+ +lln +r++l     +++y
     KHJ32817.1 296 vasnliglL-RRATIGEN-AHAKTKATKTSPADVIMWSGSKDDQTSADATIAAKatgAMSWAFITAMKKNPH-QSYVQLLNSIRDEL-----ATRY 383
                    999998752.33333333.3333445567889********************999************77777.8*************.....358* PP

                    BEEEEEEEEESSSBC CS
  Peptidase_C14 232 kqrPglssndltkkl 246
                    +qrP+ls+++  +++
     KHJ32817.1 384 SQRPQLSCSHPIDTN 398
                    ********9998876 PP

>> Raptor_N  Raptor N-terminal CASPase like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.67     6e+03      56      94 ..      40      77 ..      31      88 .. 0.64
   2 ?    0.2   0.2     0.075   6.7e+02      90     101 ..      89     100 ..      82     118 .. 0.79
   3 ?    9.3   0.0   0.00011         1      59      97 ..     158     197 ..     124     204 .. 0.79
   4 ?   -3.0   0.0       0.7   6.3e+03     132     144 ..     244     256 ..     240     257 .. 0.82
   5 ?   -2.3   0.1      0.44     4e+03      22      69 ..     320     377 ..     312     388 .. 0.48

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.67
    Raptor_N 56 lrarykqlldptvedvkklcqslrrnakdervlfHYnGh 94
                +++ry++++ p   + ++  + +++n  ++r+ ++ nG 
  KHJ32817.1 40 PSNRYSYQPAPMPSSYQQ-YHYVQQNWDNQRPNMYHNGN 77
                445666666666666666.56666777777777777765 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.075
    Raptor_N  90 HYnGhgvprpte 101
                  Y+Ghg p+  +
  KHJ32817.1  89 QYFGHGAPPDYA 100
                 7*******6555 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00011
    Raptor_N  59 rykqlldptvedvkklcqslrrnakdervl.fHYnGhgvp 97 
                 + +++++pt  ++ ++++ l ++a+ +  l fH+ Ghg +
  KHJ32817.1 158 QHNSVCQPTKANILRAMHWLVKDAQPNDSLfFHFSGHGGQ 197
                 678899**************99998776666*******76 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 0.7
    Raptor_N 132 iyifDCsnAglil 144
                   ifD++++g+ l
  KHJ32817.1 244 TAIFDSCHSGTAL 256
                 579******9987 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 0.44
    Raptor_N  22 vktkpcarleawidpsseleeiaknlqd..........qyes...lqlrarykqlldptve 69 
                  kt+p a + +w+  +++ ++  +++            +  +   ++++++y qll+   +
  KHJ32817.1 320 TKTSP-ADVIMWSGSKDDQTSADATIAAkatgamswafI--TamkKNPHQSYVQLLNSIRD 377
                 56666.667777777663222222222222223333221..22234555555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3029.79
//
Query:       KHJ32818.1  [L=1449]
Description: putative microtubule associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-23   82.0   5.9    2.5e-23   82.0   5.9   18.0 18  Cnn_1N          Centrosomin N-terminal motif 1
    1.7e-19   70.2   0.6    1.7e-19   70.2   0.6    4.4  3  PACT_coil_coil  Pericentrin-AKAP-450 domain of centrosomal ta
  ------ inclusion threshold ------
        1.5    9.0   8.6        3.8    7.7   0.2    4.7  3  Trans_reg_C     Transcriptional regulatory protein, C termina
        5.8    6.6   6.3        1.6    8.4   0.5    3.3  3  Spc110_C        Spindle pole body component 110 C-terminal do


Domain annotation for each model (and alignments):
>> Cnn_1N  Centrosomin N-terminal motif 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.0   5.9   5.7e-27   2.5e-23       1      72 [.     176     247 ..     176     248 .. 0.98
   2 ?   -7.3  15.5         4   1.8e+04      25      73 .]     301     348 ..     250     362 .. 0.64
   3 ?    2.9   1.6     0.028   1.3e+02      28      69 ..     350     392 ..     347     395 .. 0.84
   4 ?    0.6   6.4      0.14   6.5e+02      18      71 ..     377     429 ..     368     431 .. 0.81
   5 ?   -1.3   7.1      0.56   2.5e+03      27      68 ..     439     486 ..     431     492 .. 0.72
   6 !    4.8   2.0     0.007        31      34      71 ..     517     556 ..     487     558 .. 0.82
   7 ?   -0.9   1.3      0.42   1.9e+03      34      68 ..     569     603 ..     558     608 .. 0.71
   8 ?   -8.5  14.1         4   1.8e+04      13      61 ..     673     730 ..     629     736 .. 0.63
   9 ?    2.0  12.9     0.054   2.4e+02       5      69 ..     735     816 ..     734     820 .. 0.87
  10 ?    0.7   4.6      0.13   5.9e+02      18      64 ..     801     846 ..     800     857 .. 0.70
  11 ?   -9.4  14.7         4   1.8e+04      47      68 ..     866     887 ..     825     927 .. 0.46
  12 ?    1.2   1.3      0.09     4e+02      20      49 ..     930     962 ..     929     985 .. 0.54
  13 !   13.6   3.3   1.2e-05     0.055      18      72 ..     991    1058 ..     986    1059 .. 0.90
  14 !    6.9   3.8    0.0015       6.7      25      70 ..    1047    1092 ..    1046    1095 .. 0.93
  15 ?    0.7   6.5      0.13   5.8e+02      11      72 ..    1062    1122 ..    1061    1124 .. 0.74
  16 ?   -0.4   4.6       0.3   1.4e+03      22      70 ..    1115    1165 ..    1109    1173 .. 0.60
  17 ?   -0.2   0.4      0.26   1.2e+03      40      70 ..    1177    1207 ..    1162    1215 .. 0.61
  18 ?   -1.7   1.5      0.74   3.3e+03       9      42 ..    1272    1305 ..    1254    1326 .. 0.56

  Alignments for each domain:
  == domain 1  score: 82.0 bits;  conditional E-value: 5.7e-27
      Cnn_1N   1 TlrEqeeqidkLkKENFdLKLriyfLeerleklseeqkeellkenielkveveslqkelkekkkllreaeka 72 
                 +lrEqee id+++KENF LKL+i+fLee+l k ++e +e++lken+elkv+  +lqkel + +k l+ ae++
  KHJ32818.1 176 SLREQEEAIDRIEKENFALKLKIFFLEEALLKAGPEYNEAALKENTELKVDKVTLQKELIRFRKTLHAAERD 247
                 79*******************************************************************986 PP

  == domain 2  score: -7.3 bits;  conditional E-value: 4
      Cnn_1N  25 fLeerleklseeqkeellkenielkveveslqkelkekkkllreaekai 73 
                  L++r+++l+  +++  + ++ +  +++e+l++e  e++++l+eae ai
  KHJ32818.1 301 NLQDRIHNLEA-EIRRKELSLDDRDDKIEDLRQEATEREEKLHEAEMAI 348
                 44444444444.2222222233445555555555555555555555443 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.028
      Cnn_1N  28 erleklse.eqkeellkenielkveveslqkelkekkkllrea 69 
                 e++ k++e e+k  + +e+ + k+++ +l+ ++ e+++++++ 
  KHJ32818.1 350 EAQSKIGElEKKSHAFNELKQSKEKIRNLESKISEMTREIERT 392
                 6777888888999999999999999999999999999988775 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.14
      Cnn_1N  18 dLKLriyfLeerleklseeqkeellkenielkveveslqkelkekkkllreaek 71 
                 +L  +i ++  ++e++++ +++++l+ + + + ++e lq+e+ +k  + +++++
  KHJ32818.1 377 NLESKISEMTREIERTKN-DQQNALRRREQAEADIERLQDEIANKSFSAKSLNR 429
                 555688888888888888.6666777799***************9988888776 PP

  == domain 5  score: -1.3 bits;  conditional E-value: 0.56
      Cnn_1N  27 eerleklse......eqkeellkenielkveveslqkelkekkkllre 68 
                 +e+lekl+e      e+  e ++e  el v+  +l+ + k+kk  l+e
  KHJ32818.1 439 QEELEKLREeysslhEKYLEKVEESNELNVKFNNLKSKTKTKKHDLKE 486
                 566666666666666444445556669999999999999999999887 PP

  == domain 6  score: 4.8 bits;  conditional E-value: 0.007
      Cnn_1N  34 se..eqkeellkenielkveveslqkelkekkkllreaek 71 
                 +   e++++l+ en +l +++ +lq++l++ + ++ e e+
  KHJ32818.1 517 HAliEKSKALEIENDDLGEKLSNLQRDLEASRSKIVEIEE 556
                 346789999***********************99988876 PP

  == domain 7  score: -0.9 bits;  conditional E-value: 0.42
      Cnn_1N  34 seeqkeellkenielkveveslqkelkekkkllre 68 
                 ++e k+   +e   l  ++e+ q +l++k+++ r+
  KHJ32818.1 569 EQELKDRYQNEVNVLSNKIEDIQAQLERKERMSRD 603
                 33556666677777888999999999999988776 PP

  == domain 8  score: -8.5 bits;  conditional E-value: 4
      Cnn_1N  13 kKENFdLKLriyfLeerleklse.........eqkeellkenielkveveslqkelke 61 
                 +  N d K+r + L e +++l+          +++++l+++   l++e+e lq  l+e
  KHJ32818.1 673 NELNEDIKIRQQNLVETQHELTVikeelrlsqREQKQLEEKVEGLEDEIEVLQTNLDE 730
                 3336666666666655555555555344444344444444444455555555555444 PP

  == domain 9  score: 2.0 bits;  conditional E-value: 0.054
      Cnn_1N   5 qeeqidkLkKENFdLKLriyfLeerleklse.................eqkeellkenielkveveslqkelkekkkllrea 69 
                 ++++i + kKEN  L L+i   ++ l+k ++                 +++e+l++   + ++++ +l+ e+k ++++l++ 
  KHJ32818.1 735 FNKEITATKKENEELLLQITSIKSDLTKARSmasnvqketeeshingeRSREQLISLVKNSEEKLNNLRLEKKDLEDQLNKV 816
                 5799***************999999999888888888888899999989999999999999999999999999999998875 PP

  == domain 10  score: 0.7 bits;  conditional E-value: 0.13
      Cnn_1N  18 dLKLriyfLeerleklseeqkeellkenielkveveslqkelkekkk 64 
                 +L+L+ + Le++l+k +  ++++l ++   l++e+ + +++l ++++
  KHJ32818.1 801 NLRLEKKDLEDQLNKVNL-EINSLRASKASLEIENFKIKDQLSSLQD 846
                 79999999********99.5555555555555555555555555544 PP

  == domain 11  score: -9.4 bits;  conditional E-value: 4
      Cnn_1N  47 elkveveslqkelkekkkllre 68 
                 +l+ ev  lq e+++ + + ++
  KHJ32818.1 866 KLELEVLRLQEENNAANAEREN 887
                 3333333333333222222222 PP

  == domain 12  score: 1.2 bits;  conditional E-value: 0.09
      Cnn_1N  20 KLriyfLeerleklse...eqkeellkenielk 49 
                 K++i  Le r+++l++    +    ++ n e  
  KHJ32818.1 930 KMKILQLETRINELENhlnGSDSTDEEDNKEFS 962
                 777877777777777766533333333344443 PP

  == domain 13  score: 13.6 bits;  conditional E-value: 1.2e-05
      Cnn_1N   18 dLKLriyfLeerleklse.............eqkeellkenielkveveslqkelkekkkllreaeka 72  
                  +LKL+i++Le ++++++                + +l +e++el+ ++ s  k  ke++ +l+ ae++
  KHJ32818.1  991 GLKLKIFELERKVHNTEIsrfqnkslesspsIGNSKLKEELVELRAQLVSAHKNTKELRTQLKGAERD 1058
                  7*****99999988877778888999888889999****************************99986 PP

  == domain 14  score: 6.9 bits;  conditional E-value: 0.0015
      Cnn_1N   25 fLeerleklseeqkeellkenielkveveslqkelkekkkllreae 70  
                  +L+ +l+  + + ++++ ++n +l+ ++++l+ e++++ ++l++ +
  KHJ32818.1 1047 ELRTQLKGAERDAQRKIKASNLDLEMRNQNLEAEKHNLGRSLEQVQ 1092
                  68899999999******************************99975 PP

  == domain 15  score: 0.7 bits;  conditional E-value: 0.13
      Cnn_1N   11 kLkKENFdLKLriyfLeerleklse..eqkeellkenielkveveslqkelkekkkllreaeka 72  
                  k+k  N dL +r + Le + ++l+   eq++ + +   el++++ + + ++ +++++++++eka
  KHJ32818.1 1062 KIKASNLDLEMRNQNLEAEKHNLGRslEQVQLAKE---ELQIRNRTVESTILRLREKIERLEKA 1122
                  56677888888888888888888885444444444...88888888888888888888888887 PP

  == domain 16  score: -0.4 bits;  conditional E-value: 0.3
      Cnn_1N   22 riyfLeerleklse..eqkeellkenielkveveslqkelkekkkllreae 70  
                  +i  Le++l++ +    +++ ++ e+ +l++ + + q +++e++ l+re  
  KHJ32818.1 1115 KIERLEKALQAERLnsGENRTMVLERKDLHDMLRESQSQVEELDLLVRERD 1165
                  566666665544334566666666666666666666666666666666544 PP

  == domain 17  score: -0.2 bits;  conditional E-value: 0.26
      Cnn_1N   40 ellkenielkveveslqkelkekkkllreae 70  
                  el  ++  l+ e+ +l+k+  +++ +++e++
  KHJ32818.1 1177 ELRTQLEILRGERSQLRKKCSSYHAQIEELQ 1207
                  4555555556666666666666666666555 PP

  == domain 18  score: -1.7 bits;  conditional E-value: 0.74
      Cnn_1N    9 idkLkKENFdLKLriyfLeerleklseeqkeell 42  
                  i+k +  N +L  ++  ++++++++++  ++++ 
  KHJ32818.1 1272 ISKQQQNNHNLPPKLLKMKSEFDEREKNLVKQMR 1305
                  3444444444444444444444444444444444 PP

>> PACT_coil_coil  Pericentrin-AKAP-450 domain of centrosomal targeting protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.6         1   4.7e+03      26      45 ..     886     905 ..     855     935 .. 0.60
   2 ?   -2.7   0.2         2   9.2e+03      22      55 ..    1160    1202 ..    1157    1231 .. 0.47
   3 !   70.2   0.6   3.8e-23   1.7e-19       1      83 []    1317    1391 ..    1317    1391 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1
  PACT_coil_coil  26 fqacnkadlrllarigvelk 45 
                      +a n+ d++++   ++e +
      KHJ32818.1 886 ENAENQLDIKIIDMQNIEAR 905
                     45666666666666666653 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2
  PACT_coil_coil   22 qlevfqacnkadlrllarigvelk.........kkkkskeeek 55  
                      ++++++++  + +++ ++++++l+         +kk s+++++
      KHJ32818.1 1160 LVRERDQSISNLTAIENELRTQLEilrgersqlRKKCSSYHAQ 1202
                      5555555555555555555555544443333331233333333 PP

  == domain 3  score: 70.2 bits;  conditional E-value: 3.8e-23
  PACT_coil_coil    1 rleReeslRkdlayqKrYLllqlevfqacnkadlrllarigvelkkkkkskeeekrrkprrklrsaatavraiaRmrvlarkW 83  
                      +++Ree +R+++a++Kr++ lq++ f+acnkad++ll++ g++         + +r+k+  +l+ +  ++ra++Rm+++a++W
      KHJ32818.1 1317 KCQREEHFRAEAAFAKRFMGLQIALFEACNKADIQLLEKCGIKR--------PPPRPKKPMSLKRIGIVLRAMIRMKRAAERW 1391
                      89******************************************........99***************************** PP

>> Trans_reg_C  Transcriptional regulatory protein, C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.6     0.028   1.2e+02      26      67 ..     251     289 ..     222     295 .. 0.85
   2 ?   -2.5   0.1       1.3   5.7e+03      45      63 ..     905     923 ..     900     928 .. 0.78
   3 ?    7.7   0.2   0.00084       3.8      36      60 ..    1095    1119 ..    1088    1128 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.028
                  EHHHHHHHHTTTTSTSHTHHHHHHHHHHHHHHHTTTTSSSSE CS
  Trans_reg_C  26 sreeLleevwgededvddrtvdvhisrLRkkLeddekkprlI 67 
                   r++L+e   ++++++ d   +  i+ LR+ Led+   +++I
   KHJ32818.1 251 YRQQLIELQEKYKQNQMDDNAREEITELRRTLEDK---DNEI 289
                  589999999999998899999999**********3...3344 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.3
                  HHHHHHHHHHHHHHTTTTS CS
  Trans_reg_C  45 tvdvhisrLRkkLeddekk 63 
                   +++ i++L kk++ +++k
   KHJ32818.1 905 RLNTEIKNLQKKVKSSTDK 923
                  58899********996543 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.00084
                   TTTSTSHTHHHHHHHHHHHHHHHTT CS
  Trans_reg_C   36 gededvddrtvdvhisrLRkkLedd 60  
                   +e+ ++ +rtv++ i rLR+k+e  
   KHJ32818.1 1095 KEELQIRNRTVESTILRLREKIERL 1119
                   56668999**************984 PP

>> Spc110_C  Spindle pole body component 110 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0         1   4.5e+03      32      44 ..     371     383 ..     364     388 .. 0.77
   2 ?   -3.2   0.1       1.5   6.8e+03      36      49 ..     910     923 ..     907     924 .. 0.80
   3 ?    8.4   0.5   0.00036       1.6       4      35 ..    1366    1395 ..    1363    1402 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1
    Spc110_C  32 deqrlrYLqrKia 44 
                  + ++r L+ Ki 
  KHJ32818.1 371 SKEKIRNLESKIS 383
                 5789999999993 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.5
    Spc110_C  36 lrYLqrKialdedr 49 
                 ++ Lq+K+    d+
  KHJ32818.1 910 IKNLQKKVKSSTDK 923
                 678*****988887 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.00036
    Spc110_C    4 rrrlkFKTVALlVlacvRmkqvalkrrwdeqr 35  
                  ++ +  K + ++ +a +Rmk++a+  rw e+r
  KHJ32818.1 1366 KKPMSLKRIGIVLRAMIRMKRAAE--RWAEKR 1395
                  56667799999***********96..444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1449 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3221  (0.179653); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                       258  (0.0143901); expected 17.9 (0.001)
Passed Fwd filter:                       118  (0.00658152); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 5.13u 0.43s 00:00:05.56 Elapsed: 00:00:01.02
# Mc/sec: 4274.00
//
Query:       KHJ32819.1  [L=650]
Description: putative histone promoter control 2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-06   27.9   0.4    4.9e-06   26.4   0.1    1.9  2  HUN       HPC2 and ubinuclein domain


Domain annotation for each model (and alignments):
>> HUN  HPC2 and ubinuclein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.41   7.3e+03      32      50 ..     241     259 ..     239     260 .. 0.82
   2 !   26.4   0.1   2.7e-10   4.9e-06       6      51 ..     493     535 ..     489     536 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.41
         HUN  32 lvpdilktktgGFYvnqge 50 
                 +v+++  t+t+ F++ +++
  KHJ32819.1 241 VVRHNSSTNTHSFHSKSNT 259
                 5788999******999886 PP

  == domain 2  score: 26.4 bits;  conditional E-value: 2.7e-10
         HUN   6 dddgddtgsgYDieDpFIDDsElydelvpdilktktgGFYvnqgel 51 
                  +++  ++++YD +D F+DD+El  e +   +   ++GF+v++g l
  KHJ32819.1 493 PKKRKMREDEYDKDDGFVDDTELLWEEQ---AAATNDGFFVYSGPL 535
                 567777999**************99999...666778******976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (650 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1092  (0.0609069); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.54
# Mc/sec: 3614.49
//
Query:       KHJ32820.1  [L=342]
Description: putative protein-er retention receptor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.7e-42  143.6  10.1    1.3e-41  142.9  10.1    1.3  1  ER_lumen_recept  ER lumen protein retaining receptor
  ------ inclusion threshold ------
        5.5    6.8  10.4       0.38   10.5   0.2    3.3  3  PQ-loop          PQ loop repeat


Domain annotation for each model (and alignments):
>> ER_lumen_recept  ER lumen protein retaining receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.9  10.1   1.4e-45   1.3e-41       1     147 []      30     176 ..      30     176 .. 0.91

  Alignments for each domain:
  == domain 1  score: 142.9 bits;  conditional E-value: 1.4e-45
  ER_lumen_recept   1 svaGlSlktqilyalvfltryldlflylreeislyntlmkialillsiyiiylilvkfketyekekDtfklellivpsllla....llfhpg.s 89 
                      s++G+Sl tq ly+ vf++ryld+f  +    +++nt++k+++il+s+yi++l+l+++ +t+e+ek ++kl+ l +++ +++    +++++g  
       KHJ32820.1  30 SAEGVSLITQALYCAVFVSRYLDIF-LW---NTIWNTVLKFFYILSSVYILFLMLRVYARTREREK-AWKLGALCLGASAIGapimMFLFQGkL 118
                      79**********************7.23...479********************************.*****7766666666577645555559 PP

  ER_lumen_recept  90 sktllevlwtfsiiLesvAilPQlillqktgevesltshyvfalglyRalyllnWivr 147
                      ++   e++wtfsiiLes +ilPQl+ll++t+ +++++s+y+++lg+yRa+y+lnWi+r
       KHJ32820.1 119 RWGWRELFWTFSIILESTCILPQLLLLRQTTVPTVIDSYYLLTLGSYRAFYILNWIWR 176
                      9*******************************************************97 PP

>> PQ-loop  PQ loop repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.2   4.3e-05      0.38      21      53 ..      22      54 ..      22      61 .. 0.84
   2 ?    1.9   0.8     0.022   1.9e+02       4      24 ..     125     145 ..     122     181 .. 0.81
   3 ?   -3.1   0.3      0.76   6.8e+03       2      14 ..     189     201 ..     188     201 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 4.3e-05
     PQ-loop 21 iikNykrkSteGlSilflllwllGdilsllyli 53
                i  +++++S+eG+S+ +  l ++ ++ + l ++
  KHJ32820.1 22 IFAIHRNQSAEGVSLITQALYCAVFVSRYLDIF 54
                5679****************9998888777666 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.022
     PQ-loop   4 ilgyislvlwlvsyiPQiikN 24 
                 ++ ++s++l++   +PQ+++ 
  KHJ32820.1 125 LFWTFSIILESTCILPQLLLL 145
                 678999***********9865 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 0.76
     PQ-loop   2 seilgyislvlwl 14 
                 s i+g++ +++++
  KHJ32820.1 189 SIIFGILQTAFYI 201
                 6789999998885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       571  (0.0318478); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2456.21
//
Query:       KHJ32821.1  [L=406]
Description: putative zinc-regulated transporter 1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-50  171.5  10.4    3.7e-50  171.0  10.4    1.2  1  Zip       ZIP Zinc transporter


Domain annotation for each model (and alignments):
>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.0  10.4   2.1e-54   3.7e-50       3     332 ..      21     402 ..      19     403 .. 0.85

  Alignments for each domain:
  == domain 1  score: 171.0 bits;  conditional E-value: 2.1e-54
         Zip   3 lkilaiiaililsllgllgpllvpkiskl.lsklllslllafavGvllgtaflhLlPealealeesqleeehth...plagllvllGflllllvekllt 97 
                 + ++a+i ilils l++ +pll++   k  +  +ll+l l f+ Gvl++taf+hLlP a+ +l +++l + ++    plagl+ +++ l++  +e +lt
  KHJ32821.1  21 VHFYALIFILILSTLACGLPLLSKIAFKKcRTGNLLFLSLHFGTGVLIATAFVHLLPMAFMSLTNPCLASFFNMkytPLAGLISMISTLIIVGLEMYLT 119
                 6789********************9999899*************************************98655579*********************** PP

         Zip  98 mivekksshkektpkkasssssesaakksvsndkve.eseekedhvaeadtdadskeelrngkqeksesekeqas........................ 171
                    ++              s+s+++++++ +  +++ ++ +  + + ++++     ++ rn+ q+++ se+  +                         
  KHJ32821.1 120 TRGAR-------------GSHSHEGPVSKSPLGNSYtKNFDTSRRALNENSLGLPLHQRRNSLQDTDASEALLETasafsistpvfaqptsgsfhpcey 205
                 *9999.............333333333222222222022222222233333333445555555666666655555778888899999999********* PP

         Zip 172 ...............................eeedkeklaslkvraiilllglilHsfidGLAlGvssssstgislfiAvllHelpeelglgaiLlkag 239
                                                  + + + +++ +  i+l+ g+ +Hs+++G+Al+  ++  +++++++A+ +H+ +e+l+lg++++  g
  KHJ32821.1 206 enmypyesmdssvnlsspkaiqmdevsidslPISPEDHQKRQILQCIMLEAGILFHSIFIGIALS-VATGPSFFVILAAIGFHQSFEGLALGSRIAAIG 303
                 *****************************99666666667788889*******************.66778899************************* PP

         Zip 240 lsrkkav..llnllfaltaplGiliGilvrs..isessgaeivsgillalsaGtflYvalvellphEllnek..gssslkqsllqllglllGfalmlll 332
                 +s +++    ++l++++t+p+G +iGi + +  +++s   +++ gi++++s+G++lY +lv+ll++++l+++  +  + kq ++++  +++G+  m+l+
  KHJ32821.1 304 FSTRSIRpwFMVLAYGITTPIGQGIGIIMHNiyDPQSVAGLLIVGIMNGISSGLLLYAGLVQLLAKDFLSHQsyHLLKGKQRVKAFCSVVAGASSMALI 402
                 *****9999*******************777*****************************************88666789*****************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       565  (0.0315132); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2860.28
//
Query:       KHJ32822.1  [L=403]
Description: putative monooxygenase fad-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.5e-15   54.7   0.0    1.3e-14   54.2   0.0    1.2  1  FAD_binding_3  FAD binding domain
    0.00013   21.7   0.0       0.37   10.3   0.0    2.2  2  DAO            FAD dependent oxidoreductase
     0.0011   18.2   0.0        1.3    8.2   0.0    2.2  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
        0.1   12.9   0.1       0.34   11.2   0.0    1.9  2  NAD_binding_8  NAD(P)-binding Rossmann-like domain


Domain annotation for each model (and alignments):
>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.2   0.0     3e-18   1.3e-14       3     316 ..       7     320 ..       5     347 .. 0.78

  Alignments for each domain:
  == domain 1  score: 54.2 bits;  conditional E-value: 3e-18
                    EEEEE--SHHHHHHHHHHHHT..T.HHEEEEESSSSSCCSSS--EEEHHHHHHHHHTT-HHHHHHHSEECCCCEEEEEEECCCCCEEEEEHHCHHC CS
  FAD_binding_3   3 dVlIVGaGpaGlmlallLsea..G.vrvvlvekrsttvvlpradglnqrtmellrqlGledrilaegapnelmgealynelsdtpkaradleless 95 
                    +VlI G+G aG + a  L++   G +r++++e+  +  + ++   +  + + +++ +G+e++i+++++++e+ +++ +   +++ + +a+   e+s
     KHJ32822.1   7 SVLISGSGIAGPVCAYWLHRLssGlIRTTILERNGELRKAGQQIDIRGTGVSVIQRMGVEAEIRSKTTREEGLRIIDGDG-KQVAEFPAKTG-EFS 100
                    79***************9986224578*********************************************99999999.77899999999.877 PP

                    ST-CEE--HHHHHHHHHHHHHHHTEEETCSEEEECCEECCCCCCCEEEECCTTEEEEEEEEEEEE--GTT-HHHHHHTGGEEEEEEEEEEEEEEEE CS
  FAD_binding_3  96 pervtvypqteleriLvehaeerglqvrfktevesleqdeegvtaevrdketgeeetvrakYlvGaDGgrStvrktlgiefegeetvyeagvldvl 191
                      +   +  ++l +i +++ ++  ++  f++ ++ l+qd+e+ t  + + e     t + + + GaDG++S++rk +  e++ + +   +g     
     KHJ32822.1 101 FVSDIEILRERLVKIFYDK-TKDKTKYIFGNHITDLKQDDEKATVLLANGE-----TRDYDLILGADGMWSKTRKLAFPEIKDPLKH--LGQYISY 188
                    77777788999********.99999*********9****999555555554.....336699***********99887677766655..4444444 PP

                    EEC-SCCCTTC...CEEEEECCTTEEEEEECCE.TEEEEEEEEECCE-GGGSCCCHHHHHHH.HHHHHHHTTS.....SCEEEEEEEEEEEEEEEE CS
  FAD_binding_3 192 fdadlsdivep...lvlilsaesrgvmviPlen.tlerfyvqvearaekeersekfteeevk.arlreivgek.....tldveieevsawtvaqrv 277
                    f+ + +   e+   + +  ++  r++ ++P +    ++f+ +++ +  ++ r+  +t++++  +++    g++     +   +++++   ++aq  
     KHJ32822.1 189 FTIPYE--SEDgihSQWYNAEGGRSILIRPDNHgCTRAFLSIMSPQL-AGYRQLSITDQKAMmREYFLDAGWQakriiKGMEKSDDFYMQEIAQVK 281
                    444444..23357689999999**********955555555555444.444544555444431333333332211100334488899999999*** PP

                    ESSSEETTEEE-GGGTEEE-STTSHHHHHHHHHHHHHHH CS
  FAD_binding_3 278 aekyrkgrvflaGDAaHihpPtgGqGlNtaiqDavnLaw 316
                    + +y++grv l GDA  + +P  G+G  +ai  a+ La 
     KHJ32822.1 282 MPHYSRGRVALLGDAGYCPSPISGMGTTVAIVGAYILAG 320
                    ********************************9999985 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.1   0.00013      0.59       2      31 ..       8      42 ..       7      50 .. 0.84
   2 !   10.3   0.0   8.3e-05      0.37     144     261 ..     108     220 ..      41     231 .. 0.61

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00013
                EEEECTSHHHHHHHHHHHHT..T...EEEEESSSS CS
         DAO  2 vviiGGGiiGlstAyeLarr..g...Vtllekgdi 31
                v+i G+Gi+G  +Ay+L r   g   +t+le++ +
  KHJ32822.1  8 VLISGSGIAGPVCAYWLHRLssGlirTTILERNGE 42
                7899*************765545*********955 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 8.3e-05
                 EHHHHHHHHHHHHHHTT-EEEESECEEEEEEEETCEEEEEEECTEEEEEEEEEEE--GGGHHHH.HTT.CTTTSEEEEEEEEEEEEEECCTHSTGSGCS CS
         DAO 144 dpakltaalaraaealGveilegtevtgleeedgkvwgverttpgendaadavVnaaGawsdll.gll.keldlpispvrgqvlvlkplseklvspaai 240
                   ++l++ ++++ +++  + ++g  +t+l+++d+k++ +   ++ge++ +d +  a G ws+ + +l+ +e++ p++   gq++ +  ++ +  +   +
  KHJ32822.1 108 LRERLVKIFYDKTKDK-TKYIFGNHITDLKQDDEKATVL--LANGETRDYDLILGADGMWSK-TrKLAfPEIKDPLK-HLGQYISYFTIPYES-EDGIH 200
                 5556666666666555.7889999*****9888885555..44477755699********96.43444666644433.334443333333322.23355 PP

                 EEEEEEEETTTTEEEEEETTS CS
         DAO 241 lpvpetdddgrgvyvtprkdg 261
                  +++ + ++gr++ ++p+  g
  KHJ32822.1 201 SQWY-NAEGGRSILIRPDNHG 220
                 5666.8999999999998655 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0    0.0004       1.8     143     225 ..       6      88 ..       2      96 .. 0.73
   2 !    8.2   0.0   0.00028       1.3     194     244 ..     120     170 ..     108     185 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0004
                  SEEEEES-SHHHHHHHHHHHHHT-...EEEEEESSSSSS.TTS-HHHHHHHHHHHHHTTEEEEESCEEEEEEETTEEEEEEETTSCE CS
                  xxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 143 krivvvGgGyiGvElAaalaklgk...evtlveardrll.raldkelsaaleealekeGvevklgtsvkeidgngeklevvledgee 225
                   ++++ G+G  G ++A  l++l +   ++t++e++ +l   + + +++ +   +++++Gve   +++ ++ +     l+ +++dg++
   KHJ32822.1   6 LSVLISGSGIAGPVCAYWLHRLSSgliRTTILERNGELRkAGQQIDIRGTGVSVIQRMGVEAEIRSKTTREE----GLRIIDGDGKQ 88 
                  578999************999988888999999999997544455566666777777777777666663332....35567777765 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00028
                  HHTTEEEEESCEEEEEEETTEEEEEEETTSCEEEESEEEE-S-EEES-HHC CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 194 ekeGvevklgtsvkeidgngeklevvledgeeidadlvvvavGvrpstell 244
                  +k++ +  +g+ ++++++++ek++v l +ge+ d+dl++ a G+  +t+ l
   KHJ32822.1 120 TKDKTKYIFGNHITDLKQDDEKATVLLANGETRDYDLILGADGMWSKTRKL 170
                  567889999************999*****************9998877655 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   7.5e-05      0.34       3      29 ..      12      41 ..      10      53 .. 0.88
   2 ?   -2.4   0.0       1.3   5.9e+03      42      60 ..     320     338 ..     303     343 .. 0.52

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 7.5e-05
                   --SHHHHHHHHHHHCC..TE.EEEEE-SSS CS
  NAD_binding_8  3 GaGlsGlvaAylLaka..gf.dvlllekrd 29
                   G+G++G v+Ay L++   g+ + ++le++ 
     KHJ32822.1 12 GSGIAGPVCAYWLHRLssGLiRTTILERNG 41
                   9*************96567779***99875 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.3
                    TCEECTS---EEETTHHHH CS
  NAD_binding_8  42 gvrvdygahifhgsgyypn 60 
                    g ++  g+ + + +++y++
     KHJ32822.1 320 GEIFRAGPDYRKAFQNYEE 338
                    3444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 3062.41
//
Query:       KHJ32823.1  [L=333]
Description: hypothetical protein EV44_g3388 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       656  (0.0365888); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2544.18
//
Query:       KHJ32824.1  [L=136]
Description: hypothetical protein EV44_g4059 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.20s 00:00:00.57 Elapsed: 00:00:00.35
# Mc/sec: 1157.90
//
Query:       KHJ32825.1  [L=234]
Description: hypothetical protein EV44_g3648 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1994.63
//
Query:       KHJ32826.1  [L=916]
Description: putative uba ts-n domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-05   24.4   0.0    4.9e-05   23.1   0.0    1.7  1  UBA       UBA/TS-N domain
    0.00035   20.3   0.1        5.9    6.9   0.0    3.5  3  TPR_1     Tetratricopeptide repeat
    0.00068   19.6   0.1          3    8.2   0.0    3.5  3  TPR_2     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.016   15.4   0.0          7    7.0   0.0    2.5  2  TPR_12    Tetratricopeptide repeat
      0.062   13.4   0.0       0.15   12.2   0.0    1.7  1  DnaJ      DnaJ domain


Domain annotation for each model (and alignments):
>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   1.4e-08   4.9e-05       4      37 .]     300     335 ..     299     335 .. 0.96

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 1.4e-08
                 HHHHHHHHTTS-HHHHHHHHHHTTT..SHHHHHHHH CS
         UBA   4 eaiqrLveMGFdreevveALratgn..NeErAveyL 37 
                 +a+  Lv MGF+ e+ ++AL+ ++   N+++Av+++
  KHJ32826.1 300 AALKKLVKMGFSVEDSRRALVESNSklNIQAAVNWI 335
                 78999******************************8 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0016       5.9       8      31 ..     625     648 ..     623     649 .. 0.90
   2 !    4.6   0.0    0.0085        30       3      30 ..     658     685 ..     656     687 .. 0.94
   3 ?    4.4   0.1      0.01        37       2      29 ..     715     742 ..     714     743 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0016
                 HHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   8 GnayfklgkydeAleyyekALeln 31 
                 G a++k g++  A + y+  L + 
  KHJ32826.1 625 GTAHYKRGDFASAYKSYSSSLDVL 648
                 889**************9988765 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0085
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALel 30 
                  l+n++++ +k+g ++ A+ + +kALel
  KHJ32826.1 658 LLCNRALTSLKNGVPKSAILDADKALEL 685
                 689************************8 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.01
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALe 29 
                 kal +++ a+ +++++++A e  +k++e
  KHJ32826.1 715 KALLRKAEALEQMERWKDAGEIWKKCVE 742
                 799****************888888876 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0   0.00084         3       5      29 ..     622     646 ..     619     650 .. 0.85
   2 ?    1.9   0.0     0.088   3.2e+02       4      30 ..     659     685 ..     657     688 .. 0.92
   3 !    4.9   0.2    0.0092        33       2      29 ..     715     742 ..     714     743 .. 0.91

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00084
       TPR_2   5 ynlGlayyklgdyeeAleafekAle 29 
                    G a+yk+gd++ A + +  +l 
  KHJ32826.1 622 RLAGTAHYKRGDFASAYKSYSSSLD 646
                 67799**************987776 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.088
       TPR_2   4 lynlGlayyklgdyeeAleafekAlel 30 
                 l+n++l  +k+g ++ A+ + +kAlel
  KHJ32826.1 659 LCNRALTSLKNGVPKSAILDADKALEL 685
                 7899999999999************98 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.0092
       TPR_2   2 ealynlGlayyklgdyeeAleafekAle 29 
                 +al + ++a++++ ++++A e ++k++e
  KHJ32826.1 715 KALLRKAEALEQMERWKDAGEIWKKCVE 742
                 6899***************999999986 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0    0.0047        17       4      74 ..     618     685 ..     615     688 .. 0.79
   2 ?    7.0   0.0     0.002         7       5      33 ..     716     744 ..     713     758 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0047
      TPR_12   4 talnn.laavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74 
                 +++++  +++++++g+++ A + +  +l++    + p hp  +  l+n + + ++ g ++ A+    +al++
  KHJ32826.1 618 STQHRlAGTAHYKRGDFASAYKSYSSSLDVL---P-PMHPINIVLLCNRALTSLKNGVPKSAILDADKALEL 685
                 5677625666689*************99998...4.788888888888888888888888888888888775 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.002
      TPR_12   5 alnnlaavlrrlgrydeAlellekaleia 33 
                 al + a++l +++r+ +A e+ +k++e+ 
  KHJ32826.1 716 ALLRKAEALEQMERWKDAGEIWKKCVEQG 744
                 67789********************9976 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   4.2e-05      0.15       7      41 ..     858     892 ..     854     914 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4.2e-05
                 TSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHH CS
        DnaJ   7 gvskdasedeIkkaYrklalkyHPDknpkdpeaee 41 
                 g+++  +++++k  Y k + k HPDk p+d + e 
  KHJ32826.1 858 GLHELIQNNKVKIHYMKAIGKTHPDKLPQDASMEV 892
                 6778889999****************988875443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (916 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       821  (0.0457917); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.40
# Mc/sec: 6833.39
//
Query:       KHJ32827.1  [L=406]
Description: putative ubx domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-24   86.1   0.1    3.6e-23   81.9   0.0    2.6  2  SEP       SEP domain
    1.3e-11   44.1   1.0    2.5e-11   43.2   1.0    1.5  1  UBA_4     UBA-like domain
    2.1e-09   37.5   0.0    5.1e-09   36.2   0.0    1.7  1  UBX       UBX domain
  ------ inclusion threshold ------
      0.042   13.5   0.2      0.075   12.7   0.2    1.4  1  TAP_C     TAP C-terminal domain
       0.22   11.6   0.4       0.45   10.5   0.4    1.5  1  DUF1488   Protein of unknown function (DUF1488)


Domain annotation for each model (and alignments):
>> SEP  SEP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.16   5.6e+02      41      73 ..     106     137 ..     101     157 .. 0.79
   2 !   81.9   0.0     1e-26   3.6e-23       1      74 [.     220     291 ..     220     293 .. 0.96

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.16
         SEP  41 kvekgeevevnledrrneeykppkkpkfkaFsG 73 
                 + +++++++ n  d  +e++k  k+p+   F G
  KHJ32827.1 106 SLNQEQNLSDNFDDSDDEDFKGGKEPR-DLFAG 137
                 556777777788899999999988764.46877 PP

  == domain 2  score: 81.9 bits;  conditional E-value: 1e-26
         SEP   1 ltlwknGFsvdDGelrsyddpenaeflesikkGevPeelekvekgeevevnledrrneeykppkkpkfkaFsGs 74 
                 l+lw++GFs+++G+lr++ddp+na+ l++i++G++P +l+ v+++++++v+l+ +++e+yk+p+k k+++FsG+
  KHJ32827.1 220 LHLWNDGFSIEEGPLRRFDDPQNAADLQMIRQGRAPVHLMGVRHNQPIDVQLI-KHDENYKAPPK-KYVPFSGT 291
                 79***************************************************.78******987.7******7 PP

>> UBA_4  UBA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2   1.0     7e-15   2.5e-11       1      42 [.       7      48 ..       7      49 .. 0.95

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 7e-15
       UBA_4  1 deliaqFqaiTGadeekArqlLeannWdLerAislyFdsgea 42
                ++li+qF ++TGa +++A q+L+an WdL  A++ yF s+++
  KHJ32827.1  7 EALIQQFNELTGAAPAEALQYLTANRWDLSSAAAEYFTSQDE 48
                579***********************************9985 PP

>> UBX  UBX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.0   1.4e-12   5.1e-09       4      73 ..     327     396 ..     324     403 .. 0.89

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 1.4e-12
                 SSEEEEEEEETTSTEEEEEEESSSBHHHHHHHHHHHCCCCC.TSEEEEETTTTEEGGCCCCSBCCCCTTTS CS
         UBX   4 edatrlqiRlpdGsrlvrrFkksdtlesvyeyVdsklfeke.epFqLltsfPrreltksdkktLsdlgllp 73 
                 +++++l+i l++G+rl  rF++++t+  +y ++++   + + +p+ L+t+fP++  t+++  tL ++  ++
  KHJ32827.1 327 QPVITLRIQLANGTRLPVRFNPTHTVGHIYSFIERAIPGSDsRPWVLATTFPNKNHTEKT-LTLGEVPEFK 396
                 7899*******************************999877366*************998.8998886655 PP

>> TAP_C  TAP C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.2   2.1e-05     0.075       2      39 ..       9      46 ..       8      51 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.1e-05
                HHHHHHHHH-B-HHHHHHHHSSTTT-HHHHHHHHHHHG CS
       TAP_C  2 mvqafstqtgMnlewsqkcLeqnnWdyerAlqvFeelk 39
                ++q+f + tg  +  + ++L  n Wd++ A++ + +++
  KHJ32827.1  9 LIQQFNELTGAAPAEALQYLTANRWDLSSAAAEYFTSQ 46
                899**************************998776665 PP

>> DUF1488  Protein of unknown function (DUF1488)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.4   0.00012      0.45      34      75 ..       7      49 ..       5      53 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00012
                HHH....HTS---.HHHHHHHHHHTHHHHHHHHHHHHHTT--- CS
     DUF1488 34 eaLedhfgaeslr.eedllaaFeahRfdieeaaerlieaeggd 75
                eaL + f + + + ++++l+   a+R+d+  aa++ + +++ +
  KHJ32827.1  7 EALIQQFNELTGAaPAEALQYLTANRWDLSSAAAEYFTSQDEK 49
                677777777766679**********************988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.36
# Mc/sec: 3355.63
//
Query:       KHJ32828.1  [L=177]
Description: hypothetical protein EV44_g0551 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.039   13.7   0.0      0.041   13.6   0.0    1.1  1  SAGA-Tad1  Transcriptional regulator of RNA polII, SAGA, subu


Domain annotation for each model (and alignments):
>> SAGA-Tad1  Transcriptional regulator of RNA polII, SAGA, subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   2.3e-06     0.041      55     123 ..      15     101 ..       6     151 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.3e-06
   SAGA-Tad1  55 e...........nlhLHNqLllsIlkNalrespd.clakt.p.psatakkkks.....slkkspkksrsgdsqeerlkkrvmslpprd 123
                             nl+ HN+++  + +N+l  s +  ++ +   p+   +  ++          ++++++ +s ++++ +r+ +l+ + 
  KHJ32828.1  15 AlaaplieqevsNLPTHNEFVEKVQTNSLNPSSKhYQNAViSvPKN-YQVVEDngsnnEDDVLEDNENTIKSVINNYNRRYVELSDER 101
                 344444445588****************999999644444432322.22222134444333334445555555555555555555533 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       711  (0.0396564); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1298.94
//
Query:       KHJ32829.1  [L=411]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       735  (0.040995); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2900.37
//
Query:       KHJ32830.1  [L=463]
Description: hypothetical protein EV44_g3498 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00013   21.8   4.8    0.00022   21.2   4.8    1.3  1  zf-CCHC    Zinc knuckle
     0.0085   15.8   1.2      0.015   15.0   1.2    1.4  1  zf-CCHC_5  GAG-polyprotein viral zinc-finger
  ------ inclusion threshold ------
      0.048   13.4   1.6       0.09   12.5   1.6    1.4  1  zf-CCHC_4  Zinc knuckle
      0.063   13.3   0.9       0.14   12.1   0.9    1.5  1  zf-CCHC_3  Zinc knuckle
       0.69    9.8   5.4          1    9.2   5.4    1.3  1  zf-CCHC_2  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   4.8     6e-08   0.00022       2      16 ..     353     367 ..     352     368 .. 0.95

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 6e-08
                 CTSSSSSSSSTTTTS CS
     zf-CCHC   2 kCynCGepGHiardC 16 
                  Cy+CG+ GH++++C
  KHJ32830.1 353 ICYTCGRKGHWSKNC 367
                 6************** PP

>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   1.2   4.2e-06     0.015       1      20 [.     350     369 ..     350     372 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 4.2e-06
                 ---B-TTT-SSBS-TTT--- CS
   zf-CCHC_5   1 ppglCpRCkkgkHwardChs 20 
                 +++ C  C++  Hw ++Ch 
  KHJ32830.1 350 TEDICYTCGRKGHWSKNCHT 369
                 6899**************95 PP

>> zf-CCHC_4  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.6   2.5e-05      0.09      33      48 ..     353     368 ..     351     369 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.5e-05
   zf-CCHC_4  33 fCyiCgvlGHsdkrCd 48 
                 +Cy+Cg+ GH  k+C+
  KHJ32830.1 353 ICYTCGRKGHWSKNCH 368
                 8**************8 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.9   3.9e-05      0.14       6      22 ..     353     369 ..     349     389 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.9e-05
   zf-CCHC_3   6 aCQkClkkGHwtYECkn 22 
                  C +C+ kGHw+  C  
  KHJ32830.1 353 ICYTCGRKGHWSKNCHT 369
                 799********999984 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   5.4   0.00029         1       5      21 .]     353     369 ..     353     369 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00029
   zf-CCHC_2   5 vChiCgkkGHyIqdCPt 21 
                 +C  Cg kGH+ ++C+t
  KHJ32830.1 353 ICYTCGRKGHWSKNCHT 369
                 6888***********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1541  (0.0859501); expected 358.6 (0.02)
Passed bias filter:                      553  (0.0308439); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 3441.66
//
Query:       KHJ32831.1  [L=2354]
Description: putative tho2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.4e-238  793.7   0.0   2.2e-238  793.0   0.0    1.3  1  THOC2_N   THO complex subunit 2 N-terminus
    2.3e-91  306.1   0.0    4.4e-91  305.2   0.0    1.4  1  Tho2      Transcription factor/nuclear export subunit protein
    2.3e-25   88.4   0.0    5.8e-25   87.2   0.0    1.7  1  Thoc2     Transcription- and export-related complex subunit


Domain annotation for each model (and alignments):
>> THOC2_N  THO complex subunit 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  793.0   0.0  3.7e-242  2.2e-238       1     630 []     120     841 ..     120     841 .. 0.96

  Alignments for each domain:
  == domain 1  score: 793.0 bits;  conditional E-value: 3.7e-242
     THOC2_N   1 ltdeviasWessgrqelveklkqarsdededelsslfqellrsvlderlspedagsfvkeilkeeseesekskaedvaklfldvvsvldeeed..lakl 97 
                 +t+e++++W  sgr++l++ ++qar+ded+ +l s+fqel++s+l++r++pe ag++v+eil+ e++  ++++ +++++ fld++s++ e+e+     +
  KHJ32831.1 120 VTEERLSKWGYSGRDTLLALGIQARRDEDTMDLGSIFQELIKSTLEGRIDPESAGNCVQEILGVETTR-DPASLFNPQTFFLDILSMVCEAEEgkRGTA 217
                 69*************************************************************87665.56779**************88888667899 PP

     THOC2_N  98 lrkllaatiiseslmreeldskllqelglvrdtvferklirkstnllYrqkkyNLLrEeseGYSkLitelfttsdseepseekaeetlervkaliGkFd 196
                 lr ++ +t+i++++mr++ld kllqelgl+r+t f r ++r++tnllYrq++yNLLrEe+eGY+kL++elftts+se ps+e++++++ervkaliG+Fd
  KHJ32831.1 218 LRVFIITTGIPPAVMRQKLDGKLLQELGLTRET-FVRVGVRQATNLLYRQANYNLLREETEGYAKLVAELFTTSESERPSSEAVDDAFERVKALIGTFD 315
                 *********************************.***************************************************************** PP

     THOC2_N 197 LDpgRvLDviLdvfaavvvkqyrffvklLrasswwPr.............................................................. 233
                 LD+gRvLD++Ldvfa++++k+yrff+klLr+sswwPr                                                              
  KHJ32831.1 316 LDVGRVLDITLDVFASTLIKHYRFFIKLLRVSSWWPRnidadspsyyehrglpnwalptstsflpleederilktykqerdiafwakarqigldayfel 414
                 *************************************************************************************************** PP

     THOC2_N 234 ........................deesewieetktlppggnrvaAqlLgfklrfysse...addelpenllylaAlLIkiGfislsdlYphLspddee 305
                                         d ++ew+  t+tlpp+gn vaAqlLgfklrfy+s+   ++d lp nl+yl+AlLIkiGfisl+dlYphL+p+de 
  KHJ32831.1 415 sgaqgvekekieqllreknngktlDPDQEWMVVTGTLPPSGNYVAAQLLGFKLRFYTSNtrdEEDVLPPNLMYLTALLIKIGFISLRDLYPHLWPPDEA 513
                 ************************8889*********************************9************************************* PP

     THOC2_N 306 mealkekyekeleekssek.....gsanaLamagaLsdddDtep...kkekeakkkekakkkeeeekeeepepeklkdqkiqLlkaLLaiGalpeslfi 396
                 m a++e ++keleek  e+     g++naL+magaL+  dDt p    + +++k +++++ +e e+ke+ +ep+   dqk+ Ll +LL+iGa+pe+l+i
  KHJ32831.1 514 MPAVREARRKELEEK--ERlnrpgGGMNALMMAGALP--DDTLPlrgREVSNPKVDTTNPISEVEDKEKSEEPT---DQKVLLLVCLLTIGAIPEALYI 605
                 ***************..77889***************..*****888777788888888888888888888888...********************** PP

     THOC2_N 397 LgryPwlaevdpeipelihRilehsleplyesvravplssee....kvae.dqsglpkgskvkltespkkrllrwpktdkpleldl..nkkyrFyydeW 488
                 Lgr+Pwl+e++pe+ eli+Ril++s++++y++  +    ++e     v + dqsglpkg+ ++l++ p ++ lrwp++dk   +d+  n +yrFy+deW
  KHJ32831.1 606 LGRFPWLPEAYPELIELINRILNYSIKDIYQANSPISHIKSEcparMVPDfDQSGLPKGQ-LRLSPLPARKQLRWPFPDK---FDTneNLSYRFYWDEW 700
                 ********************************6655555555666689999*********.*******************...566559********** PP

     THOC2_N 489 kdnlpvcqtvddvfklckellkllGvklgkdpeLlsklcrIgkksleeedeseenrerWldllrrlllPalsllkenpgvvdevyeLlklfplekRYsl 587
                 +dn+p cqt+ddvf+lc+++l+l+Gv++gkd++Llskl+rIg+ sl + d+s++n erW++ll+rll+Palsl+ +n ++ +e+ye+l+++pl +R+s+
  KHJ32831.1 701 TDNIPLCQTIDDVFTLCNTFLNLSGVNIGKDAALLSKLARIGTMSL-ATDKSQHNYERWQSLLKRLLVPALSLTRANTSLGNEIYEMLRFYPLSVRFSI 798
                 **********************************************.9999************************************************ PP

     THOC2_N 588 YgewfegltsrlpeikaafakaeketkdiLkrlSkenikqmaR 630
                 Y+ewfeg+tsr p++k+af +a+ et++i+kr+S +n+ qma+
  KHJ32831.1 799 YAEWFEGQTSRTPAMKIAFTRAKLETQSIMKRISLTNLTQMAK 841
                 *****************************************97 PP

>> Tho2  Transcription factor/nuclear export subunit protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  305.2   0.0   7.4e-95   4.4e-91       4     301 .]    1211    1517 ..    1209    1517 .. 0.98

  Alignments for each domain:
  == domain 1  score: 305.2 bits;  conditional E-value: 7.4e-95
        Tho2    4 lspefyvtFWslslyDiyvpkeqYekeieklkseieelakdrsde.raaakkkkkekkrlkeliekLeeEkkeqiehvekvkkrLkeekkswfknde 99  
                  ++pefyv FW  +l+D ++p+++Ye+++++l +++ e+ kdrsd+ r++++kk+++kk l+  +e++ +E+++ i ++ + k+r+ e+k++wf+ ++
  KHJ32831.1 1211 VTPEFYVKFWLSTLSDFSIPSSSYENKVQELLNQVVEIGKDRSDMtRQGMAKKEENKKTLNIAREAVLKEFAKAIYSYPHKKARFLEQKSQWFN-SS 1306
                  789******************************************************************************************9.89 PP

        Tho2  100 kkkkeitdallqrcilPRlllsplDAlycakfvkllhelktpnFstldlldrlfkan.liplifscTerEaenlgrFlneilkdlkrWhkdeeayek 195 
                   k++e++d ll++ci+PRlllsp DA yc++++kllh++++p+F+tl+l+ r+f+an l++lifscT rEae+lgrFl+ +l+dl+rWh+d+++yek
  KHJ32831.1 1307 VKADEMSDFLLEKCIFPRLLLSPSDADYCFRLIKLLHDNGVPHFRTLSLYGRIFRANrLRSLIFSCTIREAEQLGRFLRLVLTDLARWHSDSTIYEK 1403
                  9************************************************************************************************ PP

        Tho2  196 eal..kkdlpgfqkklkeegk.ekelkye...qfrkvlkkwhkkilkalkscleskeymeirNaiivLkkvlevFPavknsgekvlnaveklakqek 286 
                  ea+  +k++pgf+k+l+++gk +  l+++    f++v++ w+k +++al +cl+  e+m+irNa++vLk+v+evFPav+++g+++ +++e +ak+e 
  KHJ32831.1 1404 EAWgpNKNYPGFAKSLDADGKpKALLEHDgtpGFKHVCFGWQKALNTALRDCLDGVEWMHIRNAVTVLKAVVEVFPAVDFMGNSFIKQLEAIAKREL 1500
                  ****************88888899*****7778***************************************************************9 PP

        Tho2  287 ..reDlkvlansllkll 301 
                    reDl++++n+ l +l
  KHJ32831.1 1501 rvREDLSLTSNATLVQL 1517
                  99*********988765 PP

>> Thoc2  Transcription- and export-related complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.2   0.0   9.7e-29   5.8e-25       1      76 []     843     919 ..     843     919 .. 0.98

  Alignments for each domain:
  == domain 1  score: 87.2 bits;  conditional E-value: 9.7e-29
       Thoc2   1 laklshsnPlivfevvlsqiesYdnlievvvdalkyltslsyDvLtyclleaLanserervkedg.lnlskWlqsLa 76 
                 lak+ +++P+ivf+++l qie+Y nl+evvv+++ky+t+l+yDvL+++ll++L++++r+r++++  l  s+Wl +L+
  KHJ32831.1 843 LAKTGYASPGIVFSIALGQIEAYTNLTEVVVECAKYFTDLGYDVLVWSLLNSLGGKNRNRTNSEYaLLPSRWLLALS 919
                 89************************************************************9998999****9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       690  (0.0384851); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.17u 0.30s 00:00:01.47 Elapsed: 00:00:00.49
# Mc/sec: 14507.11
//
Query:       KHJ32832.1  [L=279]
Description: putative signal sequence receptor alpha chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-11   43.6   1.7    8.5e-10   38.3   1.7    2.1  1  TRAP_alpha  Translocon-associated protein (TRAP), alpha subun


Domain annotation for each model (and alignments):
>> TRAP_alpha  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   1.7   4.7e-14   8.5e-10      65     226 ..      26     191 ..      17     279 .] 0.78

  Alignments for each domain:
  == domain 1  score: 38.3 bits;  conditional E-value: 4.7e-14
  TRAP_alpha  65 deeelkaspdadttilFtkpv..ekaeeelpageiveflvgFtnkGsedfvvesle...AsfrY.pmDfnfyiqnFsalaynkvvkPkkqatleYsFip 157
                 +ee+l+++p+    ++   p    + ++++  g+  + ++ Ftn  +e ++v s++    s++  p D      n +   +n  +k +++ +l+Y+F++
  KHJ32832.1  26 TEEKLSSTPNLAVSVIASFPSstDEFGLKIFNGHKTKAVLQFTNSEAEPIIVSSVNgilSSLKSsPTDLL-PTVNLTSARFNVAIKSSEKQSLSYTFTT 123
                 56678888888888876666544777888899**********************9944457775377765.566***********************87 PP

  TRAP_alpha 158 aeafagRPfGlvinlaYkdaeGnqfqeavfnetvnivEveeg.lDgEtlFlYvflaalvvLllvilqqvl 226
                    +      l i  +  +++G++++ + fn+tv+iv+     +D   +FlY+fl+a++   l+ ++ ++
  KHJ32832.1 124 D--LHPQNLRLDIIATISNQNGSSYHIQAFNQTVTIVDPPASiFDPQIIFLYLFLTAMTGGSLFWAYSTW 191
                 5..667778899999**********************9865428*************9988888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2116.08
//
Query:       KHJ32833.1  [L=373]
Description: putative 60s ribosomal protein l4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-36  125.2   0.1    3.5e-36  124.7   0.1    1.2  1  Ribosomal_L4     Ribosomal protein L4/L1 family
    2.1e-26   91.8   0.1    5.4e-26   90.5   0.1    1.7  1  Ribos_L4_asso_C  60S ribosomal protein L4 C-terminal domain


Domain annotation for each model (and alignments):
>> Ribosomal_L4  Ribosomal protein L4/L1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.7   0.1   3.9e-40   3.5e-36       2     191 ..      22     267 ..      21     268 .. 0.92

  Alignments for each domain:
  == domain 1  score: 124.7 bits;  conditional E-value: 3.9e-40
                   EE-HHHHSS---HHHHHHHHHHHHHSS-EE-----.-TTTSS---S-SS-SSSSSS---S-TT............STTSTT---SS---S.EEHHHH CS
  Ribosomal_L4   2 eLspkvFaapirrdlihravvaylanrrqgtastk.arsevsgsgrklwkQKGtGrARvgsir............spiargGgvahgpkperdystk 85 
                   +L pkvF apir+d+++ +++ + +n+rq++a +  a++++s+  +++++  G++ AR+++++             +++r+G+++ ++k++r++++k
    KHJ32833.1  22 PL-PKVFTAPIRPDIVQTVHTGMAKNKRQPYAVSEkAGHQTSA--ESWGT--GRAVARIPRVSgggthragqaafGNMCRSGRMFAPTKVWRKWHQK 113
                   57.9****************************9888*******..6****..********************************************* PP

                   HHHHHHHHHHHHHHHHHHHTT-EEEES....---.-S...............S--HHHHHHHHHHTT-..........................TTS CS
  Ribosomal_L4  86 lnkKvrrlAlrsaLsakakqglllvvd....nleple...............esktkelvellkklgl..........................ksk 137
                   +n  ++r+A  saL+a     lll+++    n+   +               +s+t+ +++ll+++++                          +++
    KHJ32833.1 114 INLGQKRYATVSALAASSVPALLLARGhrisNI---PevplvidssifegaaISRTSAAIKLLQSINAsadvdkvkasrktragkgklrgrrhrQRR 207
                   ***************************866644...3344558888888888999**********99999999999999999999999999999999 PP

                   SEEEEES..SSSCHHHHHHTT-TTEEEEESTT--CHHHHHSSE....EEEEHHHHHHHHH CS
  Ribosomal_L4 138 svLivvs..ekdenlvlaarnlpgvevieveslnvydllkadk....vvitksaveklee 191
                   ++L++++   + ++lv a+rn+pgve+ +v sln+++l+++ +    +++t sa++ l++
    KHJ32833.1 208 GPLVIYDptVDGSELVHAFRNIPGVETSSVYSLNLLQLAPGGHlgrfIIWTSSAFKALDK 267
                   ******96534779******************************************9986 PP

>> Ribos_L4_asso_C  60S ribosomal protein L4 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.5   0.1     6e-30   5.4e-26       1      70 [.     280     351 ..     280     357 .. 0.95

  Alignments for each domain:
  == domain 1  score: 90.5 bits;  conditional E-value: 6e-30
  Ribos_L4_asso_C   1 kgynLPrpkmtnaDlsRiinSdeiqsvlrpakkekkkkr..vqkkNPLknkqvmlrLNPyakvlrraallaq 70 
                      k++ LP+p++++aD+ R+inS+e qsv+r+a +++++kr  vqkkNPL n+qv+lrLNPya+ +r+a+++++
       KHJ32833.1 280 KDFLLPSPVVSQADIGRLINSSELQSVIRAAVGSSRTKRssVQKKNPLHNRQVLLRLNPYAAGYRKAKIGTK 351
                      79*******************************9999999****************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       294  (0.016398); expected 358.6 (0.02)
Passed bias filter:                      243  (0.0135535); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2791.55
//
Query:       KHJ32834.1  [L=794]
Description: putative 60s ribosomal protein l4-a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        3.5    8.1   6.4         21    5.6   1.0    3.9  3  DUF3209   Protein of unknown function (DUF3209)


Domain annotation for each model (and alignments):
>> DUF3209  Protein of unknown function (DUF3209)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.019   3.4e+02      36      71 ..      52      87 ..      47     119 .. 0.80
   2 ?    5.6   1.0    0.0012        21      88     117 ..     550     579 ..     489     586 .. 0.83
   3 ?   -0.2   0.1     0.075   1.3e+03      49      89 ..     588     628 ..     582     650 .. 0.69

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.019
                TTT-HHHHHHHH--SHHHHHHHHHHHHHHHHHHHHH CS
     DUF3209 36 leepgpikalaeAkdlaelerhldaalvdLeeevak 71
                ++++ +i++l++A  l++++  +++++++++++  +
  KHJ32834.1 52 IKDENKIDSLTSALPLSQIQSDMEESILKIDSTPVS 87
                567889*********************998876444 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0012
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     DUF3209  88 avrdaeralkrlveeleallddleelHdtl 117
                 + ++ e++l++++ee  ++l++l+++H+tl
  KHJ32834.1 550 ILEKKEAELSKIQEENTKILKELKDAHETL 579
                 457789**********************98 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.075
                 -SHHHHHHHHHHHHHHHHHHHHH....STT-HHHHHHHHHH CS
     DUF3209  49 kdlaelerhldaalvdLeeevaktdeddpeldYlRgrlvav 89 
                  +l++++  l a  vd e +  +  + d ++dYl++     
  KHJ32834.1 588 GELERMRCELSAMKVDFELQRKQKLAMDSDYDYLKSNYQTA 628
                 56777888888888999988888889999999998865444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (794 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1523  (0.0849462); expected 358.6 (0.02)
Passed bias filter:                      533  (0.0297284); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.77u 0.31s 00:00:01.08 Elapsed: 00:00:00.46
# Mc/sec: 5182.81
//
Query:       KHJ32835.1  [L=1121]
Description: putative tbc domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-47  159.5   0.1    1.5e-46  158.8   0.1    1.3  1  RabGAP-TBC  Rab-GTPase-TBC domain
    0.00037   20.2   5.9      0.025   14.5   0.3    4.0  5  EF-hand_6   EF-hand domain
     0.0015   18.4   0.0     0.0038   17.1   0.0    1.7  1  GRAM        GRAM domain
     0.0024   17.3   3.7       0.14   11.8   0.9    3.6  3  EF-hand_1   EF hand
      0.004   17.6   0.4      0.004   17.6   0.4    2.8  3  EF-hand_7   EF-hand domain pair
  ------ inclusion threshold ------
       0.29   10.7   2.9       0.53    9.9   0.3    2.8  2  EF-hand_5   EF hand


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.8   0.1     5e-50   1.5e-46       2     215 .]     289     493 ..     288     493 .. 0.93

  Alignments for each domain:
  == domain 1  score: 158.8 bits;  conditional E-value: 5e-50
  RabGAP-TBC   2 elRgevWklllgyepevkrlkksekkqeksekeksklekseeske.lsqIkkDvprtfpesesfknkqgqnqLeriLkaysiynpevgYcqGmndivap 99 
                 +lRge+W+l +g++        + + ++ s + ++  +++ +++  +  I+kD++r++pe + f++++g   L+r+L ays+ n+ +gYcq mn +va 
  KHJ32835.1 289 RLRGEIWELTSGSL--------FLRLENPSLYADTLAKYHGHESLaIDEIEKDLNRSLPEYAGFQSEEGIGRLRRVLTAYSWINESIGYCQAMNIVVAA 379
                 79***********5........355556777777777777777777*************99************************************** PP

  RabGAP-TBC 100 lllvsldeeeaFwcfvsLlekyklrdlytsslpglkrklkvleellkkkdpklykhlkeegldlelfaikwfltlflrefpletvlrlwD.lllegekf 197
                 ll ++++e++aF ++++L+ +  l+ +y+ ++ g+  +++v+e l++k++p l++hl + +++l++ +++wfl l+++++pl  ++r++D ++leg+k+
  KHJ32835.1 380 LL-IYMSESQAFYLLSTLC-DRLLPGYYSMTMYGTLLDQRVFESLVEKTMPILWQHLIKSDVQLSVVSLPWFLSLYINSMPLVFAFRVLDvFFLEGPKV 476
                 **.888*************.9*********************************************************************9999***99 PP

  RabGAP-TBC 198 vllrvalailklleeell 215
                  l++v+lail+ + eell
  KHJ32835.1 477 -LFQVGLAILRINGEELL 493
                 .***********999986 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       2.5   7.3e+03       8      17 ..     492     502 ..     491     504 .. 0.79
   2 ?   -2.2   0.0       1.9   5.6e+03      14      27 ..     581     594 ..     580     598 .. 0.81
   3 !    5.9   0.0    0.0046        14       2      22 ..     715     735 ..     714     742 .. 0.85
   4 !   14.5   0.3   8.4e-06     0.025       4      21 ..     754     771 ..     751     777 .. 0.86
   5 ?   -2.5   0.0       2.4   7.3e+03       2      13 ..     828     839 ..     827     843 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2.5
   EF-hand_6   8 lfDkdgdG.ki 17 
                 l+D ++dG +i
  KHJ32835.1 492 LLDANDDGaFI 502
                 79******666 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.9
   EF-hand_6  14 dGkidaeElrkalr 27 
                 + k++ +El +++ 
  KHJ32835.1 581 SKKLSLDELGALYD 594
                 6799*****99875 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0046
   EF-hand_6   2 lreaFklfDkdgdGkidaeEl 22 
                 ++++F+ +D+d++  ++ + +
  KHJ32835.1 715 MQRLFRRWDVDNNSALTLQNV 735
                 799**********99998765 PP

  == domain 4  score: 14.5 bits;  conditional E-value: 8.4e-06
   EF-hand_6   4 eaFklfDkdgdGkidaeE 21 
                 ++F+l+D d+dGk+d+e 
  KHJ32835.1 754 YFFELYDDDNDGKVDREG 771
                 89*************985 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 2.4
   EF-hand_6   2 lreaFklfDkdg 13 
                 +r+ F++ D d+
  KHJ32835.1 828 IRRCFEYADSDN 839
                 7999*****997 PP

>> GRAM  GRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   1.3e-06    0.0038       2      79 ..      35     153 ..      34     158 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.3e-06
                 HHHHHS----TT--EEEEEEEEEESS.....................SEEEEEEEEESSEEEEEE-ST.....................T---E.EEEE CS
        GRAM   2 lfrkkfkellpeEkllatykCyllrdg....................gpvqGrlyltnyrlcFrskpl.....................gsskk.vvlp 58 
                 lfr +f+ l+++   l++++++l+ +                     +++ Grl l++ +lcF+ + +                     g+  + ++lp
  KHJ32835.1  35 LFRHQFR-LPDSQTPLQEIAAELTISPpascnpnatqgekdrdrdrgYHYFGRLHLSEDYLCFSTQQTsflqtastsnssvftgqthgaGPGGNgFTLP 132
                 6899999.9999999998888887555779999999999999**************************9***************99999666556**** PP

                 GGGEEEEEE....-TT-TT-E CS
        GRAM  59 ladikriekstsaanllengi 79 
                 l +i+r+e++ s+++ ++ +i
  KHJ32835.1 133 LCAIRRVERLHSQSYHFALAI 153
                 *********999999888776 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.015        44       2      24 ..     715     737 ..     714     742 .. 0.82
   2 !   11.8   0.9   4.7e-05      0.14       5      20 ..     755     770 ..     752     770 .. 0.90
   3 ?   -1.8   0.1         1     3e+03       2      13 ..     828     839 ..     827     839 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.015
                 HHHHHHHHTTTSSSEEEHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfke 24 
                 ++++Fr  D+D++  ++++  ++
  KHJ32835.1 715 MQRLFRRWDVDNNSALTLQNVVS 737
                 5789*********9999887665 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 4.7e-05
                 HHHHHTTTSSSEEEHH CS
   EF-hand_1   5 iFrefDkDgdGkIdfe 20 
                 +F+++D D+dGk+d+e
  KHJ32835.1 755 FFELYDDDNDGKVDRE 770
                 7*************86 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1
                 HHHHHHHHTTTS CS
   EF-hand_1   2 lkeiFrefDkDg 13 
                 +++ F+ +D D+
  KHJ32835.1 828 IRRCFEYADSDN 839
                 7899******97 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       5.4   1.6e+04      16      33 ..     581     598 ..     580     615 .. 0.64
   2 !   17.6   0.4   1.3e-06     0.004       4      65 ..     715     771 ..     712     777 .. 0.83
   3 ?   -1.5   0.2       1.2   3.5e+03       4      22 ..     828     846 ..     827     876 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 5.4
   EF-hand_7  16 dgyldkeellrllrkifq 33 
                 + +l+ +el  l+  ++ 
  KHJ32835.1 581 SKKLSLDELGALYDTFYG 598
                 567888888887777763 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 1.3e-06
   EF-hand_7   4 lkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdE 65 
                 +++ F+  D+d++  l+ + + + + +i+     + +    ++ ++f+  D d+dG+++++ 
  KHJ32835.1 715 MQRLFRRWDVDNNSALTLQNVVSGIANIK----GKRD-IMGSITYFFELYDDDNDGKVDREG 771
                 6788****************999999874....4444.446799***************986 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.2
   EF-hand_7   4 lkeaFkelDtdgdgyldke 22 
                 ++++F+  D+d+  +l  e
  KHJ32835.1 828 IRRCFEYADSDNMKSLAIE 846
                 6889999999998777666 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.2      0.65   1.9e+03       8      14 ..     493     499 ..     491     500 .. 0.85
   2 ?    9.9   0.3   0.00018      0.53       5      19 ..     756     770 ..     754     770 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.65
                 H-SS-SS CS
   EF-hand_5   8 iDlNgDG 14 
                 +D+N DG
  KHJ32835.1 493 LDANDDG 499
                 8*****9 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00018
                 HHHH-SS-SSCE-HH CS
   EF-hand_5   5 FqaiDlNgDGkIske 19 
                 F+  D ++DGk+++e
  KHJ32835.1 756 FELYDDDNDGKVDRE 770
                 999**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1121 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.73u 0.24s 00:00:00.97 Elapsed: 00:00:00.41
# Mc/sec: 8136.52
//
Query:       KHJ32836.1  [L=599]
Description: putative ser thr protein phosphatase family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      3e-11   44.2   1.6    5.6e-11   43.3   1.6    1.5  1  Metallophos  Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   1.6   3.2e-15   5.6e-11       2     203 ..      38     261 ..      37     262 .. 0.68

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 3.2e-15
                  EEEEEESBTB...........TTCCTHHHHHHHHHHHHHHHTTESEEEEE.STSSSSS.......HHHHHHHHHHHHHHHHTSEEEEEC-TTS..... CS
  Metallophos   2 rilvigDlHl...........algggqlddllkllddllreekpdlvlla.GDlvdrg.......dlekellellaalvkypipvylllGNHe..... 75 
                  ++l+++D+H+           +   g++++++  +++ ++ ++ dl+l+  GD vd++       +   ++ e +++l    +  +l+lGNHe     
   KHJ32836.1  38 NFLHTTDIHGwyaghlqqgqySADIGDYSSFIHRMREKINLNGSDLLLIDtGDRVDGNglydaskPKGLFTFEIIKELDY--D--VLTLGNHElylnd 131
                  79****************999889999999999998888999******999**999987876655444444444455555..2..********55554 PP

                  CHHHHHHHHHHHHHHHHHHHEHH....HCEEETSEEEEEETTE...EEEEEEESECEEE......THHHHHHHHHHHSCHHHHCCHHHHHHHHHHTTC CS
  Metallophos  76 gfeeellnkygylgifsepwrsd....aevfnnlplaslgsgs...lkvlllhGgspel......lvsldklgslnleleapepgdewlkdlekreka 160
                  +         +y+++  ++++++    +++ +    ++    +   ++v+  ++  +         +++ ++++ + ++ +++ +++w++    re++
   KHJ32836.1 132 A------VDDEYKKLATALKEKYissnVNYIDPETGIQVP--FaqrYRVFRTKNQGIKVaafgfmFNFFKNANNTVVQRVEDTVKEKWFQA-AIREDV 220
                  2......333333333222222211112222222222222..1435566666666222244466666677777777777777776999999.****** PP

                  SEEEEEESSESSCSSSCSCCHHHHHHHHHHTTESEEEEESSSS CS
  Metallophos 161 dwvivlgHsplyrgsgylfgdealedllkkygvdlvisGHtHv 203
                  d  +v gH+pl  + +y    +a++  +kk+ +  ++++H+H 
   KHJ32836.1 221 DLFLVCGHIPLD-QPEYKIIHQAIR-AQKKHTPIQIFGAHSHI 261
                  ************.888888888888.677777888999****6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (599 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 4123.27
//
Query:       KHJ32837.1  [L=702]
Description: putative type i phosphodiesterase nucleotide pyrophosphatase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.7e-91  305.8   0.9      8e-91  305.3   0.9    1.2  1  Phosphodiest  Type I phosphodiesterase / nucleotide pyrophosp
    0.00036   20.0   0.0      0.024   14.0   0.0    2.3  1  Sulfatase     Sulfatase
  ------ inclusion threshold ------
      0.028   14.5   0.0       0.18   11.9   0.0    2.3  2  PglZ          PglZ domain
      0.071   13.1   0.6       0.17   11.9   0.6    1.6  1  ISP1_C        ISP1 C-terminal


Domain annotation for each model (and alignments):
>> Phosphodiest  Type I phosphodiesterase / nucleotide pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  305.3   0.9   1.8e-94     8e-91       1     357 []     201     537 ..     201     537 .. 0.92

  Alignments for each domain:
  == domain 1  score: 305.3 bits;  conditional E-value: 1.8e-94
                   EEEEEETT-BTTHHHHHGSTSHHHHHHHHHSEEESEEE-SSS-SHHHHHHHHHHSS-HHHHS--SSSEEETTTTEEEEEETTTTGGGGGCTTS-HHH CS
  Phosphodiest   1 vlvislDGlradlldrlaellpnlaaLakegvsapnlrpvfPtlTfpnhaslvTGlyPgeHGivgNtfydrktgeyvvfvtededaprwwqgepiwd 97 
                   +++islDG+r+d l+r  + +p l+++++eg+s ++++p+fP++Tfpnh++lvTGlyP++HGiv+N f+d++++e   +++  +++++ww+gepiw+
    KHJ32837.1 201 TILISLDGFRPDFLNR--GITPRLNSMRQEGFSPAYMLPSFPSVTFPNHYTLVTGLYPESHGIVSNVFWDEELKEQFYYTKPIAMNKKWWGGEPIWV 295
                   69**************..*********************************************************87777777777*********** PP

                   HHHHTHTTCEEEESETTTTSEBTTCT.SC.TBHHSBTCT.CSTTSCHHHHHHHHHHHHHHHC.HTHSHHHHHCT...SSESEEEEEECCCHHHHHHH CS
  Phosphodiest  98 taakarglkaaalfwpgsevdystyyylvsetppryleddfnakvpledkvdkavlqtwlda.afakvvlekel...ekpdlllvyleetDtvgHkf 190
                   ta+k+ g+k+a+++wpgse+++        +t p+yl d+fnak ++ +k  + vl ++ld+ +f++           +p+l+++y++++D+ gH +
    KHJ32837.1 296 TAEKQ-GVKTAVHMWPGSEAHIM-------NTEPTYL-DKFNAKTTMKEKSER-VL-ELLDKgSFQD--G---YneyMRPQLIATYVPHVDADGHFY 376
                   *****.****************9.......9******.99***********98.88.5555415544..2...13369******************* PP

                   -TTSHHHHHHHHHHHHHHHHHHHHHHHTTGTTTEEEEEEES---EEEHTTSEEEGGGTSTGGHGEEEEECBHHS.SSEEEEEESTEEE.CCCTTHHH CS
  Phosphodiest 191 GpdspevedalrrvDkaigdLlealderglsaetniilvSDHGmadvsddkvielndlleekgllhlkdegkggakaliainpkarelnrvaeaeae 287
                   Gp+  e++++++ +D++++++l +l++r+l++ +n+i+vSDHGma+++ d++i+l+dll+ + +++++d++     +li+++pk       ++ +++
    KHJ32837.1 377 GPNTTEIRNTISGADQMLDEILLGLERRNLTNIVNVIVVSDHGMATTDIDRMIQLDDLLDLS-KIDHIDGW-----PLIGLHPK-------RDVDVD 460
                   ***********************************************769************.99999999.....********.......666666 PP

                   HHHHHHHTCHHCCHSTHTTTEEEEEGG.GS-GGGCH..STTS-SEEEEE-TTEEEESSTTCS.........SBS-SEE--SS CS
  Phosphodiest 288 evyaelkakleelrkkegealavylke.aipkrlhy..kkrapdlvlvadpgwsitskdkpd.........eyeikgthGyd 357
                   e  ++l++k++     ++++l+vy+++ ++p+r+h+  +kr+ +++lv+  gw it+k++ d         +y + g hGyd
    KHJ32837.1 461 ELFEQLSQKVA-----SNPNLNVYMRDkNMPERYHFsnNKRIAPIWLVPMTGWAITTKEEFDikeskrkglQYHPRGLHGYD 537
                   66666666644.....589*****************877******************************************8 PP

>> Sulfatase  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   5.4e-06     0.024     115     253 ..     299     422 ..     199     456 .. 0.61

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 5.4e-06
                 CTTTSEEEETSSSCHHTCCCCCCCCCECTCCCTTTTCSHHHHHHHHHHHHHHCCCTSSEEEEEEE-TTSSSTCTCGGHTCCGSTTTTCCCCCCH..... CS
   Sulfatase 115 nrgfdrflgfptgsaalkdpekseyngevlrvppeggysddrlldealefllarndkpfflylatlapHappeapdeyakkyatffddgseaar..... 208
                 ++g  + +  ++gs+a+ ++   +y                                                      +k+++++ + ++ +r     
  KHJ32837.1 299 KQGVKTAVHMWPGSEAHIMNTEPTYL-----------------------------------------------------DKFNAKTTMKEKSERvlell 344
                 55555555555555555555544444.....................................................44444443333333344444 PP

                 .................................HHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGEEEEEEESSSSCC CS
   Sulfatase 209 .................................qlleaylnsveyvDdligrvlaaLeenglldntlvvftSDhgasl 253
                                                   + ++  n+++ +D++++++l  Le+ +l + + v+++SDhg ++
  KHJ32837.1 345 dkgsfqdgyneymrpqliatyvphvdadghfygPNTTEIRNTISGADQMLDEILLGLERRNLTNIVNVIVVSDHGMAT 422
                 44444444444444444444444444444444479999*************************************766 PP

>> PglZ  PglZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.46   2.1e+03       5      80 ..     203     278 ..     201     300 .. 0.78
   2 ?   11.9   0.0   4.1e-05      0.18      97     169 ..     344     420 ..     304     423 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.46
        PglZ   5 vIisDalryeaw.eelkqlLnkedrfeaelsavlgvlPslTklgraallpgkkllykeksaldvlvdeesseglenr 80 
                 +I  D++r +   + +   Ln+ +   ++  ++l   Ps+T      l  g  ++ +     +v+ dee +e++   
  KHJ32837.1 203 LISLDGFRPDFLnRGITPRLNSMRQEGFSPAYMLPSFPSVTFPNHYTLVTGLYPESH-GIVSNVFWDEELKEQFYYT 278
                 677788888764145788888888888888899999999999999999999998887.7788888888888887555 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 4.1e-05
        PglZ  97 llelkkderrellkdkevvyivhnkvDalgd....kasteqksfeaveeslkelkelv..kslleengykvlltaDHGf 169
                 l + +++++ + +   ++++ ++ +vDa g+    ++   +++ +++++ l e+   +  ++l++    +v++++DHG 
  KHJ32837.1 344 LDKGSFQDGYNEYMRPQLIATYVPHVDADGHfygpNTTEIRNTISGADQMLDEILLGLerRNLTN--IVNVIVVSDHGM 420
                 3445556666688999***************9998888889999999999996544331134555..59*********6 PP

>> ISP1_C  ISP1 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.6   3.8e-05      0.17      16      72 ..      34      90 ..      27      94 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.8e-05
                -TTS-EEEEEEEEETTTTEEEEEETTEEEEEEGGGEEEEE-SHHHHHTB-SSS--TT CS
      ISP1_C 16 lkDGskleCnlkinekdktlelsldekvRvikfsdikailygkeelsrveteakllk 72
                l+D ++le  l+ n +d++ +l+l +kvR++ f + +  l + e  ++++ ++k+ +
  KHJ32837.1 34 LQDEKELERLLTQNIQDNSSKLTLTQKVRKLLFLSSDFHLNQVEPNEKIKYKNKMEN 90
                89*******************************999999999999999998888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (702 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       819  (0.0456802); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.45
# Mc/sec: 4680.79
//
Query:       KHJ32838.1  [L=525]
Description: putative glutamyl-trna amidotransferase subunit a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.9e-98  328.3   0.0    1.7e-97  327.2   0.0    1.5  1  Amidase   Amidase


Domain annotation for each model (and alignments):
>> Amidase  Amidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  327.2   0.0  9.6e-102   1.7e-97      53     451 .]      47     493 ..      46     493 .. 0.94

  Alignments for each domain:
  == domain 1  score: 327.2 bits;  conditional E-value: 9.6e-102
                 EEEETTB--T.TSB--TTSGGGTT-B-SS--HHHHHHHHTT.-EEEEEE--SGGG-SSSSTT-TT---BBTTCTCC..B--SSSHHHHHHHHTTSSSCE CS
     Amidase  53 isvKDnidvk.gvpttaGskalenypaekDatvverLkkaG.avilgkTnmdefamgsstensvfgptrNPwdksr..tpGGSSGGsAAavAaglvpla 147
                 +++KDni++  g+ tt++s+ l+ny ++++a+v ++  ++G + i+gk +mdef+mgs++ +s+ gp+r    k r  +pGGSSGGsA+avA + + l+
  KHJ32838.1  47 LAIKDNISTSnGITTTCASSLLTNYQSPFEAEVLTKFCSNGeFEIMGKSKMDEFGMGSNSTHSIWGPVRRKAAKLRdfSPGGSSGGSAVAVADNHCELG 145
                 58*******99**********************99999998467************************9988877777********************* PP

                 EEEESSSTTHHHHHHCTSEEEE--TTSC--TTB--SSTTT-EEEEEESSHHHHHHHHHHHBS--TT-TTS----.................HHHHHHHH CS
     Amidase 148 iGtDtGGSiRiPAsfcglvGlKPtygrvSragvvalessldvvGplarsvedlalllrvilgedpkdstssvip.................eesedlae 229
                 iGtDtGGS+R+PA+++g++G+KP+yg++Sr+gvv++++sld++G+l+rsv d   +++ ++++d++d+ts+                     ++e+  +
  KHJ32838.1 146 IGTDTGGSVRLPAAYTGIIGFKPSYGLISRWGVVPYANSLDTIGFLSRSVGDSEEAFKLCINHDSRDPTSLTAEkrkklslhsnetytisnLPVEEDLK 244
                 ***********************************************************************988999****998888776656666666 PP

                 CTT---TT-EEEEEGGGCSS---CCHHHHHHHHHHHHHCTT-EEEEEE-CCGGGHHHHHHHHHHHHHHHHTTT-SSSSS..---SS-SCCCCCCCHHHH CS
     Amidase 230 elkkslkglriGvvkedgvasldpevqravekalkaLeeaGhevvevelpsleealslyylilvaeassnlarylgvry..erlsetkvlsellpksra 326
                 +    l+++  G++ e++ +++dpe++r+ + +lk  ++ G+++v+++lp  ++al++yy++++aea+snla+y+g+ry     +  ++ + l++ +r 
  KHJ32838.1 245 PFPCWLQQVTLGYPLEYNITEIDPEIRRVWKLTLKLFRAVGVKIVPISLPMTKFALPAYYILAPAEAASNLAKYDGIRYgiPSNDSRESEIVLYSTTRG 343
                 66777899***********************************************************************86555556667889999999 PP

                 CCS-HHHHHHHHHHHHHCSCCCCCCCHHHHHHHHHHHHHHHHHHCCC.............................BSEEEEESSSSS--BCCCCCHHH CS
     Amidase 327 ellgeevkrrielgnyalsaeasskyylkaqkvrrllrrefakafee.............................lDvllsPtaptpaprlgekdkti 396
                  +lg+ev+rri lg+y+l++e+ ++yy++aqkvrrl++r+f+++f+                              +D++lsPtap  +p l e  +  
  KHJ32838.1 344 IKLGPEVRRRILLGSYTLCSEKINNYYIQAQKVRRLIQRDFDRVFKLqnplrdyeqfdisqlhhnipvlsrvgpetVDFILSPTAPAYPPLLSEVFS-- 440
                 **********************************************99*********************************************9987.. PP

                 CSHHHHHGCCTTT...HHHHHTT--EEEEECCCC.T.TECEEEEEEESTT-HHHHH CS
     Amidase 397 dsytvlynlldftavvvpvnlaglpalsvpagks.edglPvGvqvigkafqeetlL 451
                  +    y  ++ft   vp +laglp+l++p++ s e ++ vG+q+ig+++ + +lL
  KHJ32838.1 441 ARSVDTYMNDVFT---VPSSLAGLPSLTIPVKLSdEFDFAVGMQLIGQYGTDFQLL 493
                 5799999999***...******************556***************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (525 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3533.88
//
Query:       KHJ32839.1  [L=1239]
Description: putative rho1 guanine nucleotide exchange factor 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-78  264.5   0.0      4e-78  262.8   0.0    1.8  2  CNH       CNH domain
    1.8e-47  160.8   0.0    5.1e-47  159.4   0.0    1.8  1  PH_5      Pleckstrin homology domain
    8.6e-34  117.4   0.1    1.6e-33  116.5   0.1    1.5  1  RhoGEF    RhoGEF domain
    1.5e-15   57.0   0.0    3.5e-15   55.8   0.0    1.7  1  DEP       Domain found in Dishevelled, Egl-10, and Pleckstrin
    3.5e-05   23.7   0.1    0.00036   20.4   0.0    2.6  2  PH_13     Pleckstrin homology domain
  ------ inclusion threshold ------
      0.053   14.0   0.0       0.32   11.5   0.0    2.4  2  PH        PH domain
        3.1    6.1   7.0        5.2    5.4   7.0    1.3  1  DUF1631   Protein of unknown function (DUF1631)


Domain annotation for each model (and alignments):
>> CNH  CNH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.69   1.8e+03     137     155 ..     452     470 ..     421     480 .. 0.77
   2 !  262.8   0.0   1.5e-81     4e-78       2     274 ..     917    1200 ..     916    1201 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.69
         CNH 137 vpaevfsisvlkpklcvgv 155
                 + +e++s ++++++lc+++
  KHJ32839.1 452 LLTECYSPTCTRDQLCYSI 470
                 3399************985 PP

  == domain 2  score: 262.8 bits;  conditional E-value: 1.5e-81
         CNH    2 apitggqrlllGteeGlyllnl...sdeskpvkieklssvtqlaVleelnlllllsdkqLyvydlsaLeekeeesqlakkksenltqklpetkgchf 95  
                  ap++gg++l++Gt++G+y++++   +++ kp+++ +  +vtq++Vlee++lll+ls+k+L +y++saL + e    +a +k+      ++   +c+f
  KHJ32839.1  917 APFDGGRKLIFGTDSGIYVSDRkakDSNAKPQRVLDATNVTQIDVLEEYQLLLVLSQKSLLSYPISALNPNE----PALSKR-----PKKIQSHCNF 1004
                  799*******************99989999******************************************....444555.....5666889*** PP

         CNH   96 fairngyskekfLvvavks.....kivllewneplkkfk...............kklrefqvpaevfsisvlkpklcvgvakgFelvnldegaaesl 172 
                  f+  +g + ++ Lv+ vks     +i+++e+n+ ++k k               k ++ef++p+e +si++lk+klcv++a+gFe+v+l++ +++sl
  KHJ32839.1 1005 FR--TGICLGRHLVCCVKSsalstTIKVFEPNDAMSKGKkqkgfkmfnsgqdelKAFKEFYIPTESTSIHFLKSKLCVACARGFEVVSLETLETQSL 1099
                  **..********************************************************************************************* PP

         CNH  173 ldpednsldfaarkenlkplaviqisedefLlcydefavyvdlqGrrsr.dseleWegkPesvaclepyllafhknfieirsvetgelvqeisgkkl 268 
                  ld++d+sldf+arken+kp+++ +++ +efLl y+ef ++v+++G+r+r d+ ++Weg P+s+a+++p +laf++nfie r+++t+  v++++ +++
  KHJ32839.1 1100 LDQADTSLDFVARKENVKPIHIERLN-GEFLLNYSEFSFFVNRNGWRARpDWRIDWEGLPQSFALSYPWILAFEPNFIELRNIDTNS-VHIVPHRNI 1194
                  **************************.**********************************************************76.********* PP

         CNH  269 rfllsg 274 
                  r+l+++
  KHJ32839.1 1195 RMLHTS 1200
                  ***976 PP

>> PH_5  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.4   0.0     2e-50   5.1e-47       1     135 []     762     887 ..     762     887 .. 0.97

  Alignments for each domain:
  == domain 1  score: 159.4 bits;  conditional E-value: 2e-50
        PH_5   1 lifkgtlkkketsksesadiqvyLfDhalLlvkiktvnkreqykvyrrPiPLeLLvvseaedvpkkkglkkrkssslikkkksssnlvlvpekaekkkg 99 
                 li+kgtlkk++t+    +diq+yLfDha+Llv++k+v k+e++kvyrrPiPLeLL+++e+e+v++k g++kr+sssli+ +ks+++ +      +kk+g
  KHJ32839.1 762 LIYKGTLKKTPTDP---SDIQAYLFDHAMLLVRVKIVGKKEEFKVYRRPIPLELLSIREMEEVIPKVGVSKRPSSSLIPGTKSTNSDT------SKKEG 851
                 89**********99...59*************************************************************99999995......89*** PP

        PH_5 100 yaitflhlGkkgyeltLyastlaarqkwlekiekqq 135
                 ++it +hlGk gyeltLyast+++r kw+e+i +qq
  KHJ32839.1 852 FPITCRHLGKGGYELTLYASTASSRSKWMEHIGEQQ 887
                 *********************************998 PP

>> RhoGEF  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.5   0.1   6.2e-37   1.6e-33       1     182 []     533     724 ..     533     724 .. 0.91

  Alignments for each domain:
  == domain 1  score: 116.5 bits;  conditional E-value: 6.2e-37
                 HHHHHHHHHHHHHHHHHHHHHHTHCCCHHCT.........CCHHHHHHHHCTTH...HHHHHHHHHHHHHHHHHHH.HHHTTSS-S-SHHHHHHHHSTH CS
      RhoGEF   1 vikElleTErsYvrdLkvlvevylkplsele.........vlseeeikiiFsni...eeilelhrsflleeLeerlkeseeqkeaqsigdvflkfadkf 87 
                 vi E++ TEr++v+dL++l ++++ pl++++           +e  +++iFsni   ++i++++ s + e+L er+   ++q   q++gd+fl+f ++f
  KHJ32839.1 533 VISEIMYTERDFVKDLEYLRDFWIIPLRSNNpaspspipeSRKERIVRTIFSNIidqPSIHSVS-SRFAEALTERQ---RKQPVVQCVGDIFLEFVPQF 627
                 799*********************9998777889997766666777779*****4444577777.999******99...89999*************** PP

                 HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGTT--HHHHTTHHHHHHHHHHHHHHHHHHTS-TTSH..HHHHHHHHHHHHHHHHHHHH CS
      RhoGEF  88 kkYseYcsnypnalkllkelskknkkfkafleeaeerpecskldLeslLikPvqRlprYpLLLkellkntpeshp..dyealkkaleaikevaseiN 182
                 + +  Y sn+ + +  ++++++ n++f++f++e e+r+e +kl+L+ +L kP  Rl rYpLLL+++lk+t++ +   d  ++  a+++i++++s++N
  KHJ32839.1 628 EPFIIYGSNQLAGKFEFENERSLNSYFSKFVDETERRKESRKLELNGYLTKPTTRLARYPLLLDNVLKYTDKASTnqDLTDVPLAMKMIRDLLSRVN 724
                 **********************************************************************8875533889**************998 PP

>> DEP  Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.8   0.0   1.4e-18   3.5e-15       4      72 .]     365     432 ..     362     432 .. 0.97

  Alignments for each domain:
  == domain 1  score: 55.8 bits;  conditional E-value: 1.4e-18
                 SCEEECTTEEESSE-HHHHHHHHHHHHTSSSSHHHHHHHHHHHHHCTSCECSSSSHCC--SSSSS-EEE CS
         DEP   4 lkdrrkhlktypncftGseavdWLldnldiedreeAvalgqlLldqgliehvedkhqeFrdskqafYqf 72 
                 + dr+k+  ty+n+f+G+eavd++   ++++dr+ A+ lg++L +q+++++v+++h+ +rds++  Yqf
  KHJ32839.1 365 VGDRTKNDLTYKNAFSGAEAVDVISYIIKTTDRNLALLLGRALDAQKFFHDVTYDHR-LRDSPTEMYQF 432
                 679999***************************************************.**********9 PP

>> PH_13  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.2      0.64   1.6e+03     116     147 ..     502     533 ..     488     542 .. 0.74
   2 !   20.4   0.0   1.4e-07   0.00036      22     132 ..     760     886 ..     754     901 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.64
                 ESSHHHHHHHHHHHHHHHHHHHHHHTTXXXXX CS
       PH_13 116 aesanersaWvkkikeAsekyietekkkreka 147
                  ++  e+++W++ +++     +++  kkr+  
  KHJ32839.1 502 QDEPDEQKLWINTVSQEIADSVDEREKKRQEV 533
                 567789999***99887777777666666654 PP

  == domain 2  score: 20.4 bits;  conditional E-value: 1.4e-07
                 --EEEEEEEEETTT-.-EEEEEEESSEEEEEEEE----.-------S-SS--EEEEE-SS-EETTSEEEE-.........................-SS CS
       PH_13  22 RkllhsGklyKaksn.KElvgFLfNDFlLltqpvkklsvssaqeklfesksnaqfklYkkpiflnevlvkk.........................psd 94 
                 R l++ G+l K+ ++  +++++Lf   +Ll+++   ++            ++ +fk+Y++pi l+ +++++                          sd
  KHJ32839.1 760 RELIYKGTLKKTPTDpSDIQAYLFDHAMLLVRVK-IVG------------KKEEFKVYRRPIPLELLSIREmeevipkvgvskrpssslipgtkstNSD 845
                 89*********9876379*************994.333............3579***************************************977666 PP

                 S-.----EEEEEESSE...EEEEEESSHHHHHHHHHHHHHH CS
       PH_13  95 ksdssekvlklsdidk...vitlkaesanersaWvkkikeA 132
                 +s+++   ++  +  k   ++tl a++a++rs+W+++i e 
  KHJ32839.1 846 TSKKEGFPITCRHLGKggyELTLYASTASSRSKWMEHIGEQ 886
                 666665555555554322289*****************874 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00012      0.32      28     102 ..     785     885 ..     763     888 .. 0.71
   2 ?   -2.7   0.0       3.3   8.4e+03      29      58 ..     932     961 ..     923     977 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00012
                 TEEEEESST...TCTTESSEEEEEESTTEEEEEEEC......................TTSSSSTSEEEEEESTSSS.TEEEEEEESSHHHHHHHHHHH CS
          PH  28 sellyyknd...ksekdkepkgsislsncevvevva......................tedpkrkfcfelriverng.srtyllqasseeerkeWikai 100
                   +l+ + +   k+e+ k +++ i+l+ ++++e ++                      ++d+ +k  f ++  + ++   +++l+as++++r++W+++i
  KHJ32839.1 785 HAMLLVRVKivgKKEEFKVYRRPIPLELLSIREMEEvipkvgvskrpssslipgtkstNSDTSKKEGFPITCRHLGKgGYELTLYASTASSRSKWMEHI 883
                 4544444445555566667777778888888777777777667777777777777774447777777777666555555******************99 PP

                 HH CS
          PH 101 qs 102
                  +
  KHJ32839.1 884 GE 885
                 66 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 3.3
                 EEEEESSTTCTTESSEEEEEESTTEEEEEE CS
          PH  29 ellyykndksekdkepkgsislsncevvev 58 
                  +++ + + ++++ +p+++++ +n++  +v
  KHJ32839.1 932 GIYVSDRKAKDSNAKPQRVLDATNVTQIDV 961
                 345555557888999999999999998876 PP

>> DUF1631  Protein of unknown function (DUF1631)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   7.0     0.002       5.2     149     295 ..      51     232 ..      44     298 .. 0.70

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.002
     DUF1631 149 snPlgPealcralrealesldlelkvklillklferqvlaelgelyeelNqlLieaGvlPelkaaprarqsrrasasaagaaeekeeeqkaPaaaaaaa 247
                 s  ++Pe + r++    +s++l+  ++ +  +  ++q++ ++++ + + +  L   G  Pel+ +p  +++++ +  ++   + +++ +++P + ++  
  KHJ32839.1  51 SSSISPENIERTFTLNSQSMGLNHATQNMYPNRQQQQLVYQYQHGVGQSDGSLQSNGYNPELRNSPISQEQAQPQ--PQYLPQMQQRLDRRPYPGPNRI 147
                 56789**************************************************************44444444..3334444444444444444443 PP

     DUF1631 248 agaaeaqasaaaaaegaae..........................lfsaLqqLLsqareaaaaaaqaassasg...........a 295
                 ++ +   +++ a+  ++ +                          + ++ ++++sq+++++  +aq++++ s            +
  KHJ32839.1 148 DPRSAPPPAPYAHRHPPPRyfvgdnstfdadlyrsqsksvairpqVYNSTSNVFSQTSSNSFRQAQQSPQSSRttaqgrvvperH 232
                 3322222222222222222467777777777777778888899997777777777777776666666655444554455555553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.81u 0.28s 00:00:01.09 Elapsed: 00:00:00.43
# Mc/sec: 8641.41
//
Query:       KHJ32840.1  [L=968]
Description: putative 2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-70  237.6   0.0    1.8e-70  236.8   0.0    1.4  1  MutS_V    MutS domain V
    2.9e-43  148.3   3.8    5.4e-43  147.4   3.1    1.9  2  MutS_III  MutS domain III
    3.2e-19   69.2   0.0    8.3e-19   67.9   0.0    1.7  1  MutS_I    MutS domain I
    4.2e-08   33.6   0.0    1.5e-07   31.7   0.0    1.9  1  MutS_II   MutS domain II


Domain annotation for each model (and alignments):
>> MutS_V  MutS domain V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.8   0.0     4e-74   1.8e-70       1     186 [.     776     966 ..     776     968 .] 0.92

  Alignments for each domain:
  == domain 1  score: 236.8 bits;  conditional E-value: 4e-74
                 EEEE-STTSSHHHHHHHHHHHHHHHHHT--BSSSEEEEE--SEEEEEE--------SS-HHHHHHHHHHHHHTT--TTSEEEEESTS-SS-HHHHHHHH CS
      MutS_V   1 llitGpnmaGkstylrqvalivllaqiGsfvpaekaeisivdkiftRvgasDdlakgkstFmvEmlEtasilknatekslvilDElGRGtstydGlaia 99 
                 +litGpnm+Gkst+lrq+ali++laq+Gs+vpa++aei+ivd+if+R+g++D+l++++stFm+EmlEta+ilk+a+++s+vi+DE+GRGt+ +dG a+a
  KHJ32840.1 776 WLITGPNMGGKSTFLRQNALITILAQVGSYVPASYAEIGIVDQIFSRIGSADNLYRDQSTFMLEMLETAQILKQASSRSFVIMDEIGRGTTPEDGEAVA 874
                 69************************************************************************************************* PP

                 HHHHHHHHHTT--EEEEEES-GGGGGHHHH..STTEEEEEEEEEEET...TEEEEEEEEEES--SS--HHHHHHHTT--HHHHHHHHHHHHH CS
      MutS_V 100 lavaeyllekikaktlfatHyheltklaek..leevknlhlavkeee...edivflykvkegaaeksyGikvaklaglPesvverArevlke 186
                 +a++ +l+  +k++tlfatH+h lt+ a +  le++     +++ee+    ++ +++k+keg++++s+ +kva+lag+Pe+v++ A++ l e
  KHJ32840.1 875 WACLWHLTCINKCRTLFATHFHGLTDRALSmgLESIGLWCTDIEEEScanGSFRYIHKLKEGVNRRSHALKVARLAGVPEEVIQVAQKFLCE 966
                 *************************8654411677776666666543223899*********************************998765 PP

>> MutS_III  MutS domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.89     4e+03     132     132 ..     211     211 ..      75     314 .. 0.61
   2 !  147.4   3.1   1.2e-46   5.4e-43       1     191 []     369     722 ..     369     722 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.89
                 H CS
                 x RF
    MutS_III 132 e 132
                 +
  KHJ32840.1 211 T 211
                 2 PP

  == domain 2  score: 147.4 bits;  conditional E-value: 1.2e-46
                 HHHHHTTSSS-TTS.SSSS-HHHHH---SSHHHHHHHHHHHH--BS-HHHHHHHHHHHHH.T..TT.HHHHHHHHTT---HHHHHHHHHTT---HHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III   1 aTlrnLeilenlrggskegsLlgvldrTvTamGaRlLrewllqPltdleeInaRldaVee.leneelreelrellrrlpDleRllsrislgkakardlk 98 
                 +T+r+Lei+++l++ s  gsLl+++++TvT+ GaRlL +wl +P+t+l++In Rld+Ve+ ++ne lr+e+r ll++++D +R++++++ g+++++dl+
  KHJ32840.1 369 NTIRALEIRNTLSD-SIVGSLLHTIRQTVTKGGARLLDRWLGSPSTSLDVINSRLDLVEYlIKNEPLRKEIRLLLNKVHDSHRIVQKFAFGRGNPDDLL 466
                 7*******999666.7789*****************************************9************************************** PP

                 HHHHHHHHHHTTTTT---SSTHHHHH..............HHHHHHHHHHB-SS--SSGGGS--B-T................................ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxx................................ RF
    MutS_III  99 allealkaleelvallekeklaesee..............eslaelleeaideeplalekegedlra................................ 151
                 al+++++++++l ++ ++ + +   e              + la++++ aidee+   e++  ++++                                
  KHJ32840.1 467 ALASTIDTTQDLLDTIKRFSDT---EpinsiilrikidgtKTLAKRIKAAIDEEGVLIEQRRIEEDTrkmraiaeavliadnsnddlhsgdttssdlpp 562
                 *******999988888544332...2467899**9999966699***********99999999999999****************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
    MutS_III 152 ................................................................................................... 151
                                                                                                                    
  KHJ32840.1 563 kttlrqrkkpssirehycesggawimkpaasptlkslhdefsqlsierdelerelckrlgaasltlrftpglghichvkgkdininvqnarsvgssrst 661
                 *************************************************************************************************** PP

                 .....................HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH CS
                 .....................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III 152 .....................iealeqelfqelleeveealerlrrlaealaeLDvllSlA 191
                                       +a+eq +f+ l+e v++++ +lr++a++l+eLDv++S A
  KHJ32840.1 662 rsfhfpewtklglkieqcmsrMRAEEQVVFHALRELVAKNIGKLRQNAAVLDELDVACSSA 722
                 ********************999999*********************************87 PP

>> MutS_I  MutS domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.9   0.0   1.8e-22   8.3e-19       9     112 ..      91     199 ..      84     200 .. 0.87

  Alignments for each domain:
  == domain 1  score: 67.9 bits;  conditional E-value: 1.8e-22
                 CCCHH-TTCEEEEEETTEEEEECHHHHHHHHHCSSSSTT.ESSSSC.EEEEEEEHHHHHHHHHHHHHT.T-EEEEEEE-S-HHHH...S...S--EEEE CS
      MutS_I   9 elkkkykdavlffrvGdfYelfgeDAviaareleitltkrkkssekeipmagvPehalekylrkLvek.gykVavveqtetpaek...kg..vvkrevv 101
                 +  ++ +++vl+ rvG fYe+++e+A  +  +l++++ ++k++++  ++mag+P  +l++yl++Lv+  +  Va++e   +       +g  +++r+v+
  KHJ32840.1  91 NNMQNFENCVLLTRVGGFYEIYFEQADEIGPLLGLKVATKKTNAGP-VSMAGFPFFQLDRYLKSLVQDlNRNVAIAEEFANDTVGklkTGglMHDRRVT 188
                 5567799*******************************88776665.********************88**********887777453125699***** PP

                 EEEBTTC-TTS CS
      MutS_I 102 rviTpGtltde 112
                 rviT+Gtl+de
  KHJ32840.1 189 RVITKGTLIDE 199
                 ********997 PP

>> MutS_II  MutS domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   0.0   3.4e-11   1.5e-07      13     125 ..     236     344 ..     228     352 .. 0.70

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 3.4e-11
                 SEEEEEEEETTTTEEEEEEEEE-HHHHHHHHHH-ESEEEEESS-SCCCHHHHHHCHCTTT-.EEEEESCCCCSHCCH.HHHCHHHB--STTTTTTTGGG CS
     MutS_II  13 rrvGlafiDlstgefvvsefedfeeleaeLsrlsPkElllpedlsestaeeessklrelrs.rvgvretvefeseka.serleedfsvedldgfgleke 109
                   vGla++Dlstg+f++++++  + l + L+r++P+E++l+e l+ ++  e  + l ++ s  +++ ++ +f+  ++ s  le    ++++++f++   
  KHJ32840.1 236 VLVGLAWLDLSTGQFFTQRTN-LATLPSVLARINPREIVLNECLKLDKDHEIFNILANDSSsLISYLKDPKFKNISEwSSMLESPVPNRSIKNFTH--- 330
                 459*****************8.9*******************987666544444444444304444444444444443455555557777777765... PP

                 -HHHHHHHHHHHHHCC CS
     MutS_II 110 kklalaAlgalisYle 125
                    +++A ++l++Y+e
  KHJ32840.1 331 --EEVSAGSTLLQYIE 344
                 ..56666777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (968 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.75u 0.29s 00:00:01.04 Elapsed: 00:00:00.46
# Mc/sec: 6334.66
//
Query:       KHJ32841.1  [L=765]
Description: putative ubiquitin carboxyl-terminal hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.4e-55  186.4   0.2    6.4e-55  186.4   0.2    1.6  2  UCH            Ubiquitin carboxyl-terminal hydrolase
    1.7e-24   87.0   6.5      1e-19   71.3   0.3    2.7  3  UCH_1          Ubiquitin carboxyl-terminal hydrolase
  ------ inclusion threshold ------
      0.082   12.4  13.1      0.032   13.7   2.4    3.2  4  Peptidase_C98  Ubiquitin-specific peptidase-like, SUMO isopep


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.4   0.2   1.1e-58   6.4e-55       1     257 []      59     489 ..      59     489 .. 0.92
   2 ?   -3.4   0.4      0.88   5.2e+03     110     177 ..     599     621 ..     586     649 .. 0.49

  Alignments for each domain:
  == domain 1  score: 186.4 bits;  conditional E-value: 1.1e-58
                 -EES-SSSTHHHHHHHHHHHTSHHHH.HHHHTCHHCCSSTCCCCC...................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx...................................................... RF
         UCH   1 tGlsNlGntCymnsvlQcLfsipelr.dyllsleevkkesrnkke...................................................... 44 
                 +G++N+GntCy+ns++Q+L++  ++r +++ +  ++++ +  +++                                                      
  KHJ32841.1  59 FGMENFGNTCYCNSIVQALYHSIPFReNVMSY-PPRSTSEILDDStktvpsirsiiqngpasalnskskaltaaetakkraaisagqtvststgqrped 156
                 69************************555555.555554444444699*************************************************** PP

                 ......................-.TT.TTS.TTHHHHHHHHHHHHHH..SH-CCEE--HHHHHHHHHHSGGGTSSSTCEHHHHHHHHHHHHHHHHCC.. CS
                 ......................xxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.. RF
         UCH  45 ......................lnesnplgkkgelakalkdlfkell..kskskavsPkklkktlsklaksfsgykqqDaqEflaflLdqlhedlnr.. 117
                                        ++s++ g+k+  ++ lkd+f +l+  ks++  +sP++++++++k++++f++++ qDa+Ef   +L+++  ++++  
  KHJ32841.1 157 kpdspeykkkqaltcgpvleltYDNSKSYGMKESTFTTLKDIFMALIesKSRTGVLSPQRFLEIFRKENETFRTSMHQDAHEFYGLVLNSVITNVEAka 255
                 ************9999987765488999999999*************9999999********************************************* PP

                 ........................HCCCHHH.HHHCCCTTSHHHHHH-EEEEE.............................................. CS
                 ........................xxxxxxx.xxxxxxxxxxxxxxxxxxxxx.............................................. RF
         UCH 118 ........................evaeekw.kkhlkrndslitdlfegqlks.............................................. 145
                                          v+ +   +   +  +s+++++feg l+s                                              
  KHJ32841.1 256 qelkdvspkspstldssiecspssVVNTMSLgNGVRTPGTSWVHEIFEGVLTSetkcltcetvsqrdetfldlsidldehssvtsclrkfsaeemlcer 354
                 **********************98667777788899999************************************************************ PP

                 ................EEEEEEB-SEEEEEEESEEETEE...EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-BEEEEEEEEEES.CTTSEEEEEEEE CS
                 ................xxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx RF
         UCH 146 ................klklkrlPeiLiihlkRfsynss...ksKlntkvefpeeldlssylaeekkkkteekkkYeLiavvvHsG.slssGHYvayik 224
                                 ++k+krlP+iL +hlkRf+y+++    +Kl ++v +p  l + +++++ ++++    + YeL+avvvH+G ++ +GHYv++ik
  KHJ32841.1 355 nkfhcdncgglqeaerRMKIKRLPKILALHLKRFKYTEDmtqLQKLFHRVVYPYHLRMFNTTDDVEDPD----RLYELYAVVVHIGgNAYHGHYVSVIK 449
                 ************************************8888899***************99887666665....45************************ PP

                 CTTTTEEEEEETTEEEEE-HHCCCTT.........CEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxx RF
         UCH 225 nekngkWykydDetvkevkeeeevls.........sayiLfY 257
                  +++  W+ +dDe v++v+++   ++          ay+LfY
  KHJ32841.1 450 -TQDRGWLLFDDEMVEPVDKH-YAQNffgdkpgmaCAYVLFY 489
                 .66777*************77.4455777778889******* PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.88
                 HHHHHHCCHCCCHHHHHHCCCTTSHHHHHH-EEEEEEEEEEEB-SEEEEEEESEEETEE..EEE--SEEB CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxx RF
         UCH 110 qlhedlnrevaeekwkkhlkrndslitdlfegqlksklklkrlPeiLiihlkRfsynss..ksKlntkve 177
                 ++h+++ +                                                +++  ++K n+++e
  KHJ32841.1 599 SVHSKMTN-----------------------------------------------KDQKalEKKENKEIE 621
                 33333333...............................................211122223222222 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.1   1.6e-07   0.00095       2      28 ..      60      87 ..      59      92 .. 0.91
   2 !   71.3   0.3   1.7e-23     1e-19     105     318 ..     239     461 ..     125     463 .. 0.73
   3 ?   -2.6   0.2      0.53   3.2e+03     111     136 ..     602     625 ..     547     677 .. 0.56

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1.6e-07
                xxxxxxxxxxxxxxxxxxxxxxxxx.xx RF
       UCH_1  2 GLEnhivnsYlNslLQvlyfipplr.nl 28
                G+En  +++Y+Ns++Q+ly+  p+r n+
  KHJ32841.1 60 GMENFGNTCYCNSIVQALYHSIPFReNV 87
                9************************554 PP

  == domain 2  score: 71.3 bits;  conditional E-value: 1.7e-23
                 xxxxxxxxxxxxxxxxxxxx.................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 105 fnrflldqlekelketkkns.................................seeesaieqllgtkaettirclkCgseksrksstlvldlkyPkpsn 170
                 f   +l+ + ++ + + ++                                  ++ +s ++++++  ++++++cl+C++ ++r++++l l++       
  KHJ32841.1 239 FYGLVLNSVITNVEAKAQELkdvspkspstldssiecspssvvntmslgngvrTPGTSWVHEIFEGVLTSETKCLTCETVSQRDETFLDLSIDL--D-- 333
                 33334444444433333322555566677777777777777777777777777889999*****************************997744..2.. PP

                 xxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 171 ekkeakvtfasilkssler...ekttrawCekCkryqpteqrktvknlPpvLalnakle.eeeelelwktknwlpleiklsldedknleeklkeereka 265
                     +++++ s+l+++  +    + ++  C++C   q  e+r ++k+lP++Lal++k++  +e      + + l++ ++  +++ +     l+  ++++
  KHJ32841.1 334 ----EHSSVTSCLRKFSAEemlCERNKFHCDNCGGLQEAERRMKIKRLPKILALHLKRFkYTE------DMTQLQKLFHRVVYPYH-----LRMFNTTD 417
                 ....33566777777666633336799******************************984333......33455555555444433.....33333334 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 266 kaekeikvYeLqsvvvhigdskesghLvslvkvaekelerdppesqWylFNDf 318
                 + e+  + YeL +vvvhig +  +gh+vs++k +         +  W+lF+D 
  KHJ32841.1 418 DVEDPDRLYELYAVVVHIGGNAYHGHYVSVIKTQ---------DRGWLLFDDE 461
                 55677899***********7777*********63.........348******5 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 0.53
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 111 dqlekelketkknsseeesaieqllg 136
                 +++ ++ +++ +  ++e+++ie+  +
  KHJ32841.1 602 SKMTNKDQKALE--KKENKEIEKARK 625
                 222222222111..222222333222 PP

>> Peptidase_C98  Ubiquitin-specific peptidase-like, SUMO isopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.18   1.1e+03       6      39 ..      63      96 ..      61     138 .. 0.71
   2 ?   13.7   2.4   5.4e-06     0.032     118     217 ..     295     406 ..     195     411 .. 0.67
   3 ?    4.8   0.1    0.0028        17     216     250 ..     428     462 ..     418     475 .. 0.75
   4 ?   -4.3   0.5       1.7     1e+04      23      57 ..     602     636 ..     597     656 .. 0.46

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.18
  Peptidase_C98  6 nkenlCWLDsllvalvhletlkkalseleseees 39
                   n  n C+ +s++ al h+  +++++++  ++++s
     KHJ32841.1 63 NFGNTCYCNSIVQALYHSIPFRENVMSYPPRSTS 96
                   77799999********999999998777666555 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 5.4e-06
  Peptidase_C98 118 dslaeklfkssfswefeCseCgvkkkerve.....ktl...ttftnvvpdwhplnA...vhlapCnkCkk.keqrrkmvlekvpsvlmlHFveGLp 201
                     s+++++f+  ++ e +C +C++ +++  +       l   ++ t+ +  ++  +     +   C++C   +e +r+m+++++p++l+lH      
     KHJ32841.1 295 TSWVHEIFEGVLTSETKCLTCETVSQRDETfldlsIDLdehSSVTSCLRKFSAEEMlceRNKFHCDNCGGlQEAERRMKIKRLPKILALHLKRFKY 390
                    579999999999999999999987776533111112232224666667777654431004556899997637789***************999999 PP

  Peptidase_C98 202 hndlekysfefegkqY 217
                    ++d+++++  f+   Y
     KHJ32841.1 391 TEDMTQLQKLFHRVVY 406
                    9999988888877766 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.0028
  Peptidase_C98 216 qYsvtaviqYkkelkHFvtwirnsdgsWlecDDLk 250
                     Y v   i  ++ + H+v+ i+++d  Wl +DD  
     KHJ32841.1 428 LYAVVVHIGGNAYHGHYVSVIKTQDRGWLLFDDEM 462
                    455555555688899*****************954 PP

  == domain 4  score: -4.3 bits;  conditional E-value: 1.7
  Peptidase_C98  23 letlkkalseleseeeslvkrlltkyeqaqallke 57 
                    +++ +k ++ le++e++ +++  ++ ++a    ++
     KHJ32841.1 602 SKMTNKDQKALEKKENKEIEKARKANKKALLKERK 636
                    44444444444444444444444444443333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (765 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1514  (0.0844442); expected 358.6 (0.02)
Passed bias filter:                      589  (0.0328518); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.30s 00:00:01.01 Elapsed: 00:00:00.45
# Mc/sec: 5123.81
//
Query:       KHJ32842.1  [L=242]
Description: putative atp-dependent clp protease proteolytic subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.4e-74  247.4   0.0    1.1e-73  247.1   0.0    1.1  1  CLP_protease  Clp protease


Domain annotation for each model (and alignments):
>> CLP_protease  Clp protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.1   0.0   5.9e-78   1.1e-73       5     181 ..      49     227 ..      45     228 .. 0.96

  Alignments for each domain:
  == domain 1  score: 247.1 bits;  conditional E-value: 5.9e-78
                   ECHHHHHHHHTTTEEEEES-BSHHHHHHHHHHHHHHHHH-SSS-EEEEEEE--B-HHHHHHHHHHHHHSSS-EEEEEEEEEETHHHHHHHTS-TTGE CS
  CLP_protease   5 raydiysrllkeriiflgseiddevankiiaqLllLeaedpdkdillyinspGGsvtaglaIydtmqyikpdvsticlGlaaSmgslllaagekgkR 101
                   r+ di+s+ll erii+l++e+d++++++++aqLl+Le+e+p+k+i+lyinspGGsvtaglaIydtm+yik++vst+c+G+aaSmgslll++gekgkR
    KHJ32842.1  49 RTSDIFSKLLAERIICLNGEVDNSLSASVVAQLLYLESESPNKPITLYINSPGGSVTAGLAIYDTMNYIKSPVSTVCVGQAASMGSLLLVGGEKGKR 145
                   789********************************************************************************************** PP

                   EEETTEEEEES-TEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTS..-HHHHHHHHCSTEEEEHHHHHHHTSSSEE-SS CS
  CLP_protease 102 falpnarimihqPlggaqgqasdieieaeellkikerlneilakhtgq..slekiekdldrdtflsaeeAveyGLideviek 181
                   ++lpn  imihqP+g + gqasdi+i+a+e+l+++ ++nei+ kh  +  s ++i++ ++rd+f++a+eA+e G+ide++ +
    KHJ32842.1 146 YCLPNGSIMIHQPSGSYAGQASDISIHANEILRVRCNVNEIFRKHLTKefSFDQISELMERDRFFTANEAMEIGIIDEILVS 227
                   *********************************************87723579**************************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1812.31
//
Query:       KHJ32843.1  [L=392]
Description: putative trna (adenine-n -)-methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.1e-07   28.8   0.0      0.012   15.3   0.0    2.3  2  GCD14            tRNA methyltransferase complex GCD14 subunit
    0.00035   20.4   0.0      0.017   14.9   0.0    2.5  1  Methyltransf_31  Methyltransferase domain
  ------ inclusion threshold ------
      0.043   14.8   0.0       0.11   13.5   0.0    1.8  2  Methyltransf_24  Methyltransferase domain


Domain annotation for each model (and alignments):
>> GCD14  tRNA methyltransferase complex GCD14 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   2.9e-05      0.17      23      63 ..     107     155 ..      88     160 .. 0.77
   2 !   15.3   0.0     2e-06     0.012     117     161 ..     249     292 ..     190     376 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.9e-05
       GCD14  23 ilytaDisliimkLelkp...Gsv.....vvesGtGsgslshaiartva 63 
                  +y++D sli+  L+l+p   G++     + e+GtG g+l+ ++ar++ 
  KHJ32843.1 107 PIYSQDASLIVSLLDLHPtvpGTKtekleIFEAGTGHGALTLYLARAIH 155
                 58*************9743337753344479****************97 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 2e-06
       GCD14 117 vfLDlPaPweaiphaakalkkeggrlCsfsPCieqvqrtceaLre 161
                   LDlP+P + ++ +++a+ k++g l  f P i q+ ++    r+
  KHJ32843.1 249 AILDLPSPQDYMKIVSNAV-KDNGLLLIFVPSITQINKASMIARN 292
                 569****************.7889999*********998655443 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   2.8e-06     0.017      31     119 ..     193     285 ..     130     317 .. 0.67

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.8e-06
  Methyltransf_31  31 vvGiDiseeaielAre....naqklgldnveFeqgdiee.leklledekfDlilsnevlnaladpdkileeiervlkpggilliedprllaelp 119
                      ++ +D++e+  ++A +     +q   +  + F+qg+iee ++ +l+  + +  +   ++ +l++p+++++ +++++k++g lli  p++ + ++
       KHJ32843.1 193 IHTLDNQENHSRHAAAnimrFRQGIYFHHIDFHQGSIEEfISGKLA-GSSNKPFLEHAILDLPSPQDYMKIVSNAVKDNGLLLIFVPSITQINK 285
                      777777777777777744322344467799*********7665477.7899999999999************************9999443333 PP

>> Methyltransf_24  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.8e-05      0.11       2      63 ..     138     234 ..     137     275 .. 0.71
   2 ?   -3.1   0.0       2.7   1.6e+04      67      78 ..     347     358 ..     319     372 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.8e-05
  Methyltransf_24   2 EiGvysGvstlwllralrrnga...............................grlvavdhdpg.aeeaaalare...aglddrvrlikadsee 60 
                      E G+ +G  tl+l+ra++++++                                 ++++d+++  +++aaa++ +     + ++++++++  ee
       KHJ32843.1 138 EAGTGHGALTLYLARAIHAANTlppkipiesqieslddssvkekydawraqrrAVIHTLDNQENhSRHAAANIMRfrqGIYFHHIDFHQGSIEE 231
                      89****************************8888888888888888888887777777777773322333333224445566667777777766 PP

  Methyltransf_24  61 ala 63 
                       ++
       KHJ32843.1 232 FIS 234
                      655 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.7
  Methyltransf_24  67 agsiDllfiDgg 78 
                       g++D + +D  
       KHJ32843.1 347 VGQFDHINVDIT 358
                      457777777754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 2966.68
//
Query:       KHJ32844.1  [L=546]
Description: putative metallo-dependent phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-17   64.3   0.1    3.8e-17   63.5   0.1    1.4  1  Metallophos    Calcineurin-like phosphoesterase
    4.8e-05   23.6   0.0    0.00046   20.4   0.0    2.1  1  Metallophos_2  Calcineurin-like phosphoesterase superfamily d


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.1   4.2e-21   3.8e-17       1     203 [.     218     464 ..     218     465 .. 0.70

  Alignments for each domain:
  == domain 1  score: 63.5 bits;  conditional E-value: 4.2e-21
                  EEEEEEESBTB...............TTCCTHHHHHHHHHHHHHHHTTESEEEEESTSSSSS...HHHHHHHHHHHHHHHHTSEEEEEC-TTS...CH CS
  Metallophos   1 lrilvigDlHl...............algggqlddllkllddllreekpdlvllaGDlvdrg...dlekellellaalvkypipvylllGNHe...gf 77 
                  ++i++++DlHl               a g++  +++l+++++ll+  kpd+v+l GD +++    d ++++ ++ a+l++++ip++++ GNH+     
   KHJ32844.1 218 FKIMQVSDLHLstgtgkcrdpqppetAQGCEADPRTLDFMERLLDADKPDIVILSGDQINGEtapDAQSAIFKYAAPLIERKIPFATIFGNHDdegS- 314
                  79***********************************************************999999999***********************6541. PP

                  HHHHHHHHHHHHHH.......HHHHEHHHCEEETSEEEEEETTE......EEEEEEESECEEE....THHHHHHHHHHHSCHHHHCCHHHHHH..... CS
  Metallophos  78 eeellnkygylgif.......sepwrsdaevfnnlplaslgsgs......lkvlllhGgspel....lvsldklgslnleleapepgdewlkd..... 153
                      l+++++  +        s +   + + ++n+++ +   gs      +++l  hG sp++                        ++wlk+     
   KHJ32844.1 315 ----LSRETQMSLIeslpyslSVIGPPNIDGVGNYYVEVQAHGSkhsaltIYLLDTHGYSPDErnfkG-------------------YDWLKKnqidw 389
                  ....3333322222211223333444445555666666633333448866666666666666655332...................33333322222 PP

                  ...........HHHHTTCSEEEEEESSESS..............CSSSCSCCHHHHHHHHHHTTESEEEEESSSS CS
  Metallophos 154 ...........lekrekadwvivlgHsply..............rgsgylfgdealedllkkygvdlvisGHtHv 203
                              e  ++   ++++ H+pl+              +g   +  +  ++d l + gv lv +GH+H 
   KHJ32844.1 390 fratanelkrnHEGYSHIHMDLAFIHIPLPefrneslprkgawrEGVTAPLYNSGFRDALIEEGVLLVGCGHDHA 464
                  2224442111133333344455555*****99999988777777777777777777799999************6 PP

>> Metallophos_2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   5.1e-08   0.00046       2     130 ..     219     465 ..     218     501 .. 0.56

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 5.1e-08
  Metallophos_2   2 klaiiSDlH........................snldaleavlealkevgvdaiihaGDl..eeeep.......evleellela.pvlaVrGNnD. 62 
                    k++ +SDlH                        + ld  e++l+a    ++d +i++GD   +e++p       +  + l+e++ p+ +++GN+D 
     KHJ32844.1 219 KIMQVSDLHlstgtgkcrdpqppetaqgceadpRTLDFMERLLDA---DKPDIVILSGDQinGETAPdaqsaifKYAAPLIERKiPFATIFGNHDd 311
                    677899999999999999999999998887766667777777766...3469*******6666677744433334555555555***********7 PP

  Metallophos_2  63 .......................................................................eevveedvlreaaelgtdlpeeael 87 
                                                                                           +        +++ ++ ++  +e + 
     KHJ32844.1 312 egslsretqmslieslpyslsvigppnidgvgnyyvevqahgskhsaltiylldthgyspdernfkgydwlK--------KNQIDWFRATANELKR 399
                    777777777777777777777777776666665444444444444444444444444444332222211110........1111111111111111 PP

  Metallophos_2  88 elagek.....vlliHgdpl....................gvkdalaellkeaeegsdvvvcGHtHvp 130
                    + +g +     +++iH   +                     ++ +++++l e  eg+ +v cGH H  
     KHJ32844.1 400 NHEGYShihmdLAFIHIPLPefrneslprkgawregvtapLYNSGFRDALIE--EGVLLVGCGHDHAN 465
                    1112223333366666653366666666666655554444444444444444..55556667777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.38
# Mc/sec: 4289.85
//
Query:       KHJ32845.1  [L=298]
Description: putative alpha beta hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-48  164.5   0.0    2.9e-48  164.2   0.0    1.0  1  Hydrolase_4    Serine aminopeptidase, S33
      4e-12   46.3   0.1    6.4e-11   42.4   0.2    2.0  2  Abhydrolase_1  alpha/beta hydrolase fold
    1.6e-09   38.7   0.0      2e-09   38.4   0.0    1.1  1  Abhydrolase_6  Alpha/beta hydrolase family
    0.00086   19.1   0.0     0.0015   18.3   0.0    1.3  1  PGAP1          PGAP1-like protein
  ------ inclusion threshold ------
      0.012   15.5   0.0      0.028   14.3   0.0    1.6  2  Lipase_3       Lipase (class 3)
      0.021   14.5   0.1       0.06   13.0   0.1    1.8  1  Esterase       Putative esterase
       0.03   14.1   0.0          2    8.1   0.0    2.7  3  Abhydrolase_2  Phospholipase/Carboxylesterase
      0.031   13.7   0.0       0.75    9.2   0.0    2.2  2  Peptidase_S9   Prolyl oligopeptidase family


Domain annotation for each model (and alignments):
>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.2   0.0   1.3e-51   2.9e-48       2     238 ..      26     273 ..      25     274 .. 0.93

  Alignments for each domain:
  == domain 1  score: 164.2 bits;  conditional E-value: 1.3e-51
  Hydrolase_4   2 epkavvvlvHGlaehsgryaelaeaLaaqGfavyalDhrGhGrse...gkrghvpsfddyvdDlaafvekvkeehpel.plfllGhSmGGliallyl. 94 
                  +p a ++++HG+ +h++ry el+  La qG++v+++D+rG+G+s      rg   ++++++ D+ +f++++    p   p+f++GhSmGG+ al ++ 
   KHJ32845.1  26 SPVAKLIFIHGFDDHVDRYYELFPTLASQGIEVCGFDQRGWGHSVqkvSDRGLTGPTETVIGDIVSFISTHL---PSPvPIFIMGHSMGGAEALVLAc 120
                  68899****************************************99999*****************87766...4444***************9997 PP

  Hydrolase_4  95 .lrypd...kvaglilsaPalkikaklkappllklllkllgkllpklqvsnnlkadslsrdpevvaayeadplvhgkitvrlllelldamkrleeraa 188
                    +y d   +++g+il +P++++++  +++ + k+l +l++++lp+ q++ ++  ++lsrdpevv ++++dp++ g  t++ l+++l+ +++l +   
   KHJ32845.1 121 nPKYTDvvgQIRGWILESPLIALAKGSEPSFITKFLGRLVARILPWKQIPTGIPREDLSRDPEVVHSLKNDPFLYGVGTLEGLAGMLERADDLSNGRL 218
                  766666888***************9977*******************************************************************999 PP

  Hydrolase_4 189 kit...lPllllhGeaDkvvdpeasrelyer..lgskdktlklypglyHellnEp 238
                  k++     +++ hG+ Dk ++ eas++ +++  +  +dk+lk+y+g+yH+l+ + 
   KHJ32845.1 219 KLNkevQSIWIGHGTCDKATSLEASKKWFDEhcIDVEDKELKIYEGGYHQLHADL 273
                  99988788******************99997335667***************986 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   0.2   2.9e-14   6.4e-11       3      93 ..      31     121 ..      30     131 .. 0.91
   2 ?    1.9   0.0     0.065   1.5e+02     164     252 ..     182     269 ..     133     272 .. 0.69

  Alignments for each domain:
  == domain 1  score: 42.4 bits;  conditional E-value: 2.9e-14
                    EEEE-STTTCGGGGTTGHHHHHHHHTTSEEEEEEETTSTTSSSTTTGB.CHHSHHHHHHHHH.HHHHHCTTSSEE.EEEETHHHHHHHHHHHH CS
  Abhydrolase_1   3 lvilhGlpgssdvwaerglapaLakdgfdvillDlrGvgySspapacinddygtasvaddld.rildalgddklt.lvGhSmGGmialayaae 93 
                    l+++hG+ +  d ++e  l+p+La +g +v+++D+rG g+S    + +  + +t +v  d+  +i  +l+   ++ ++GhSmGG+ al +a  
     KHJ32845.1  31 LIFIHGFDDHVDRYYE--LFPTLASQGIEVCGFDQRGWGHSVQKVSDRGLTGPTETVIGDIVsFISTHLPSPVPIfIMGHSMGGAEALVLACN 121
                    89**************..***********************999997764458888888888799******99999************99975 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.065
                    HCHHHCCHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHCTHHHHSEEEEEEETTCSSSCHHHHHHHHHCHTS.......EEEEEEETCSSSH CS
  Abhydrolase_1 164 pdkskrfpssgsdnasslatgalksieqwpttdsaklllrlrelknvlaptlvisgtsDplvppkaledlaqllpk.......krlvvisdagHla 252
                    p+++ +++++ + + +++  g ++ +e+++++ ++ l l+  +       +  i++ +  +++  +le +++++ +       k+l+++++++H +
     KHJ32845.1 182 PEVVHSLKNDPFLYGVGTLEGLAGMLERADDLSNGRLKLN--K------EVQSIWIGHGTCDKATSLEASKKWFDEhcidvedKELKIYEGGYHQL 269
                    6667777777777777777777777777777777666655..4......56778889999999999999999955544445558888888888865 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.0     9e-13     2e-09       1     210 [.      31     270 ..      31     279 .. 0.51

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 9e-13
                    EEEE--GC.....GCHHHH.HHHHCCTCEEEEE--TTSTS-.....GGCS--HHH..CHHHHHHHCCTT..TTSEEEEEETCHHHHHHHHHHCC.. CS
  Abhydrolase_6   1 vlllHGagssassWlvapL.aallaagvhvlapDlpGhGrs.....dpppldled..ladlaalldelaagggpvvlvGHSlGGalalaaapla.. 86 
                    ++++HG+  + + + + +L   l+++g++v  +D +G G+s     d+  ++ ++  + d++ ++     ++ p++++GHS+GGa al    la  
     KHJ32845.1  31 LIFIHGFDDHVDRY-Y-ELfPTLASQGIEVCGFDQRGWGHSvqkvsDRGLTGPTEtvIGDIVSFISTHLPSPVPIFIMGHSMGGAEALV---LAcn 121
                    79****44433333.3.55266666669999********555555444444444422455555555555366666*********95555...4444 PP

                    ..........EE.EEES-............----TTTS----TTHHHHHHTT-CCCCHCCHS-HSCCCCHHHCCCCHCHCCCGHHHHCCHHCHTTC CS
  Abhydrolase_6  87 ........lvvg.vlldp.........pp.talpagllaaalelllallallrllawlsreplprlfladedadaawrarlarlaallaglgllpa 163
                            +++g +l +p         p+  +  +g l a++ ++++ ++  ++  +++   + +++ +      ++ + + +l  l+ +l+  +a
     KHJ32845.1 122 pkytdvvgQIRGwILESPlialakgsePSfITKFLGRLVARILPWKQIPTGIPREDLSRDPEVVHSLKN-----DPFLYGVGTLEGLAGMLE--RA 210
                    578877777777555555333333332113122222233333333333333333222221112223333.....333333333333333333..23 PP

                    CHHTT-TTGC......EEE..CTT-C.....HHHHCHHCCCH.STTEEETCE...SSS-HH CS
  Abhydrolase_6 164 aawadlpvpl......lvl..ggeDp.....lvprllerlla.qagarlpvvlpgaGHlph 210
                    +++   +  l      +++  g+ D+     + + +++++   +++++l ++++g+ H +h
     KHJ32845.1 211 DDLSNGRLKLnkevqsIWIghGTCDKatsleASKKWFDEHCIdVEDKEL-KIYEGGYHQLH 270
                    3333333333444443233344778877776666888888888899999.99999999555 PP

>> PGAP1  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   6.5e-07    0.0015      74     117 ..      84     126 ..      79     157 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 6.5e-07
       PGAP1  74 daIkyIlslysssekeptsviliGHSmGGivaraaltlknyikq 117
                  +I  I s  s++ + p  ++++GHSmGG  a +++  ++y  +
  KHJ32845.1  84 TVIGDIVSFISTHLPSPVPIFIMGHSMGGAEALVLACNPKYT-D 126
                 67999***************************9999999974.3 PP

>> Lipase_3  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.2e-05     0.028      65      85 ..     101     121 ..      44     131 .. 0.82
   2 ?   -2.7   0.0       2.1   4.8e+03      25      57 ..     248     275 ..     233     290 .. 0.58

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.2e-05
                 EEEEEEEETHHHHHHHHHHHH CS
    Lipase_3  65 ysivvtGHSLGgalAlLaald 85 
                 + i + GHS+Gga Al++a +
  KHJ32845.1 101 VPIFIMGHSMGGAEALVLACN 121
                 7799************99975 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.1
                 HHHH-GTT-EEEHHHHHHHHS-HHHHHHHHHHH CS
    Lipase_3  25 kellekeggkvhsgfleayeeslreqvlkelkr 57 
                 +e    + + v+   l++ye   + q++++l++
  KHJ32845.1 248 DE----HCIDVEDKELKIYE-GGYHQLHADLQK 275
                 33....34566666677777.777777777766 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   2.7e-05      0.06     117     136 ..     103     124 ..      83     272 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.7e-05
                 EEEEEETHHHHHHHHHHHC..S CS
    Esterase 117 ravaGqSmGGlgALilalk..h 136
                   ++G+SmGG  AL+la +  +
  KHJ32845.1 103 IFIMGHSMGGAEALVLACNpkY 124
                 679**************86444 PP

>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.39   8.7e+02      15      28 ..      29      42 ..      19      56 .. 0.72
   2 ?    2.2   0.0     0.058   1.3e+02     106     123 ..     102     119 ..      61     141 .. 0.81
   3 ?    8.1   0.0   0.00091         2     135     202 ..     202     270 ..     193     280 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.39
                   EEEEEE--TT--SH CS
  Abhydrolase_2 15 avviflHGlGdsgh 28
                   a +if+HG  d  +
     KHJ32845.1 29 AKLIFIHGFDDHVD 42
                   56899999877655 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.058
                    GEEEEEETHHHHHHHHHH CS
  Abhydrolase_2 106 riiigGFSqGaalalyla 123
                     i+i+G S+G+a al la
     KHJ32845.1 102 PIFIMGHSMGGAEALVLA 119
                    49*********9888665 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.00091
                    EES---TTGGGTTTTS-GGGGG-.EEEEEEETT-SSS-HHHHHHHHHHHHTTS-GEEEEEETT--SS-- CS
  Abhydrolase_2 135 afsgalplsqklessatavtkkl.pilqiHgeeDpvvplalgkaakevlkkllkkvelksyeglaHsid 202
                    ++ g+l  +  l++   +++k++ +i  +Hg++D+   l  +k+    +   +++ elk+yeg+ H+  
     KHJ32845.1 202 GLAGMLERADDLSNGRLKLNKEVqSIWIGHGTCDKATSLEASKKWFDEHCIDVEDKELKIYEGGYHQLH 270
                    57788888888999999999887467889*********99999887777777778**********9875 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00033      0.75       8      81 ..      49     118 ..      42     127 .. 0.87
   2 ?    2.1   0.0      0.05   1.1e+02     142     191 ..     223     272 ..     207     293 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00033
                   HHHHCCT-EEEEE--TTSSTTHCHHHHTTSGGGGHHHHHHHHHHHHHHHHTTS--GGGEEEEEETHHHHHHHHH CS
  Peptidase_S9   8 qlladrGyvvvvanirGsggyGeafhdagkrklgqnefdDfiaaaealakegyvdserlaitGgSyGGyltgaa 81 
                    +la++G+ v+  + rG g+  ++  d+g     +  + D++     ++++++ ++  ++i+G+S GG  ++++
    KHJ32845.1  49 PTLASQGIEVCGFDQRGWGHSVQKVSDRGLTGPTETVIGDIVS----FISTHLPSPVPIFIMGHSMGGAEALVL 118
                   57899************************99999999999997....5678899999***********876655 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.05
                   ---EEEEEEETT-SSS-THHHHHHHHHHH--S-SEEEEEETTS-SSTTSS CS
  Peptidase_S9 142 aypplLlihGlaDdrvppaealklvaaLqkkgknvlllifpdegHgvgkp 191
                   + +++ + hG+ D+ + ++ + k++++     ++ +l+i+ +  H +  +
    KHJ32845.1 223 EVQSIWIGHGTCDKATSLEASKKWFDEHCIDVEDKELKIYEGGYHQLHAD 272
                   66777889******************988777778999999998855443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2162.42
//
Query:       KHJ32846.1  [L=190]
Description: hypothetical protein EV44_g6419 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.094   12.5   0.3       0.97    9.3   0.2    2.4  2  Robl_LC7  Roadblock/LC7 domain


Domain annotation for each model (and alignments):
>> Robl_LC7  Roadblock/LC7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.2   5.4e-05      0.97      15      52 ..      23      61 ..       7     112 .. 0.89
   2 ?   -3.1   0.0      0.38   6.8e+03      48      60 ..     163     175 ..     144     183 .. 0.54

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 5.4e-05
                ECEEEEEETTS-EEEE.CCSSSS-HHHHHHHHHHHHHHH CS
    Robl_LC7 15 vrgalvvskdGlviat.stldnddadqlAalasgllsaa 52
                ++  l+vs  G ++++ s+l+ ++++  A+la++l+s++
  KHJ32846.1 23 IHTLLLVSPAGKLLSSsSSLPASRLRTQATLAHSLWSLY 61
                67789*******************************997 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.38
                 HHHHHHHHHHHCT CS
    Robl_LC7  48 llsaakaaarelg 60 
                 ++  a+++a+ l+
  KHJ32846.1 163 FQKQAEEVAKWLD 175
                 5555556655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1457.05
//
Query:       KHJ32847.1  [L=109]
Description: hypothetical protein EV44_g2002 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       205  (0.011434); expected 358.6 (0.02)
Passed bias filter:                      115  (0.00641419); expected 358.6 (0.02)
Passed Vit filter:                         3  (0.000167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 856.95
//
Query:       KHJ32848.1  [L=181]
Description: hypothetical protein EV44_g3482 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00039   21.1   0.2    0.00054   20.7   0.2    1.1  1  Pex14_N   Peroxisomal membrane anchor protein (Pex14p) conser


Domain annotation for each model (and alignments):
>> Pex14_N  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.2     3e-08   0.00054      12      86 ..      79     152 ..      76     174 .. 0.65

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 3e-08
     Pex14_N  12 LqdpsVrsaplekkvaFLesKGLtqeEIeeaLkraereeeasesavaassaseqa.qeesasssatpqpqaasqts 86 
                 L+d  +r+ +++ k aF  +KG+++ + + a++r +++++++++++a++s++     + ++   +++qp++  +t+
  KHJ32848.1  79 LRDTIIRNLSMKLKQAFIYKKGIENLDLDSAMARLQDTHNKKRPNAAPASKF--RfRAPTTPDVNNTQPNEHLTTT 152
                 78999*****************************777666665432333332..1222222333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       327  (0.0182386); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1318.30
//
Query:       KHJ32849.1  [L=328]
Description: putative powdery mildew-specific protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.18   11.0   0.0       0.29   10.3   0.0    1.3  1  CENP-M    Centromere protein M (CENP-M)


Domain annotation for each model (and alignments):
>> CENP-M  Centromere protein M (CENP-M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   1.6e-05      0.29      28      84 ..     110     167 ..     103     178 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 1.6e-05
      CENP-M  28 keqLaeaivkeekefklqvrlaksLPLPseneelrPridlvvfiidlkskls.lktve 84 
                 + +La ai + e +  +++   +  PLP + ++ rP  d +v i+ l++++s + tv+
  KHJ32849.1 110 NARLAIAIGDFEDTPIMEIGKLTCFPLPGKCQSPRPTTDELVSILALQNRYSeVATVQ 167
                 67899999999999999999999***************************99666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2370.70
//
Query:       KHJ32850.1  [L=124]
Description: hypothetical protein EV44_g2222 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       754  (0.0420548); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 918.89
//
Query:       KHJ32851.1  [L=388]
Description: putative cation diffusion facilitator 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.4e-17   62.9  16.0    4.2e-17   62.5  16.0    1.1  1  Cation_efflux  Cation efflux family
    1.7e-09   37.6   0.3    3.8e-09   36.6   0.3    1.5  1  ZT_dimer       Dimerisation domain of Zinc Transporter
  ------ inclusion threshold ------
       0.03   14.3   0.1        2.5    8.1   0.0    2.6  3  DUF2441        Protein of unknown function (DUF2441)


Domain annotation for each model (and alignments):
>> Cation_efflux  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.5  16.0   7.1e-21   4.2e-17       2     192 ..     102     288 ..     101     295 .. 0.92

  Alignments for each domain:
  == domain 1  score: 62.5 bits;  conditional E-value: 7.1e-21
  Cation_efflux   2 ilsllanlilalvelivglltnSlalladafhslsdlvsllllllalklsrkppderfpfGygrlevlgalvsgllllglavfllleaiqkli..k 95 
                    ++sl+a ++la+ ++++++ +nSl l+     +++d +s+l l++   +++k + +rfp G  rle+lg +    +++ + +fl++ ai  l+   
     KHJ32851.1 102 YASLFASILLAALQIFAAITSNSLCLFTSMASAIFDPLSNLALIICNLATKKVNLKRFPAGKSRLETLGNISFCFIMISVSLFLIILAIRELMneT 197
                    689*************************************9999999888********************************************99 PP

  Cation_efflux  96 egereihaglalvvalvslvvnlalllilrragrklrsaalkaaalhvlgDal.tslgvlvsalvillfnlksgplaDpvaslligliilysalkl 190
                     +++++     l+ ++++l+++l ll+++ +   k + + ++  ++++++D++ +  ++l+ +l+++++   +  ++Dp ++++i++i+   +l++
     KHJ32851.1 198 TNGDMEFKLPSLIAVIAALIIKLHLLFYCWGL--KDKYSQVNILWQDHRSDLFiNGFAILMNLLGSKFM---W--WIDPTGTIIISIIVSFIWLRT 286
                    99****************************87..5688999999*********5556777778888887...4..9*************9999887 PP

  Cation_efflux 191 lk 192
                    + 
     KHJ32851.1 287 MF 288
                    65 PP

>> ZT_dimer  Dimerisation domain of Zinc Transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.6   0.3   6.3e-13   3.8e-09      15      77 ..     314     375 ..     302     376 .. 0.91

  Alignments for each domain:
  == domain 1  score: 36.6 bits;  conditional E-value: 6.3e-13
                 T-SS-EEEEEEEEE-S----EEEEEEEE-TTS-HHHHHHHHHHHHHHHHHH-TT--EEEEEEE CS
    ZT_dimer  15 svpgvkgvhdlrtrksGskifvdlhievdgdlsvkeaHeiadevekrikeefpgvadvliHve 77 
                 + p +kg++ +r+ +sG+k++++++i + +d s+++ H++a+ ++ ++ e++p++++ ++Hv+
  KHJ32851.1 314 HSPSIKGIETVRVYHSGPKLIAEIDILMGPDRSLRQTHDVAEGLKTKL-EKLPDIERAYVHVN 375
                 5799********************************************.589*********97 PP

>> DUF2441  Protein of unknown function (DUF2441)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.75   4.5e+03      37      65 ..      69      97 ..      61     110 .. 0.61
   2 ?    8.1   0.0   0.00042       2.5      28      77 ..     120     169 ..     111     173 .. 0.86
   3 ?    3.2   0.0     0.014        81      51      75 ..     187     211 ..     177     219 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.75
                HHHHHHHHHHHHHHHHHHH.HHHHHHHHHH CS
     DUF2441 37 nedakvvldtvnddarvir.eliveevrke 65
                ne ++ +l++vnd  + +r e + e  rk 
  KHJ32851.1 69 NERIEWMLKSVNDSSIEARvEGVAE-QRKV 97
                5667777888887776666244444.3444 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00042
                 EETTEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTS--TTT-E CS
     DUF2441  28 ikneeLvfdnedakvvldtvnddarvireliveevrkeyfpelPsrlkCl 77 
                 i  ++L + ++ a  ++d +++ a++i +l + +v ++ fp   srl+ l
  KHJ32851.1 120 ITSNSLCLFTSMASAIFDPLSNLALIICNLATKKVNLKRFPAGKSRLETL 169
                 445567777999***********************************987 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.014
                 HHHHHHHHHHHHHHHH-TTS--TTT CS
     DUF2441  51 arvireliveevrkeyfpelPsrlk 75 
                 +++irel+ e++  ++ ++lPs + 
  KHJ32851.1 187 ILAIRELMNETTNGDMEFKLPSLIA 211
                 689******************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       992  (0.0553294); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 2903.39
//
Query:       KHJ32852.1  [L=390]
Description: putative c2h2 finger domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.029   14.8   3.8      0.091   13.3   3.8    1.9  1  zf-C2H2    Zinc finger, C2H2 type
      0.054   13.6   0.7        0.2   11.8   0.3    2.2  2  DUF2990    Protein of unknown function (DUF2990)
      0.071   13.6   2.3        3.2    8.3   0.5    2.5  2  zf-H2C2_2  Zinc-finger double domain
       0.13   12.4   3.6       0.29   11.2   3.6    1.7  1  zf-BED     BED zinc finger
        3.5    8.7   7.2          2    9.5   4.4    2.2  2  zf-C2H2_4  C2H2-type zinc finger


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   3.8   2.5e-05     0.091       2      20 ..     116     134 ..     115     137 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.5e-05
                 EETTTTEEESSHHHHHHHH CS
     zf-C2H2   2 kCpdCgksFkrksnLkrHi 20 
                 kC++Cgk +k++s L +H+
  KHJ32852.1 116 KCDKCGKEYKHSSCLSKHL 134
                 8*****************7 PP

>> DUF2990  Protein of unknown function (DUF2990)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   5.6e-05       0.2      36      64 .]      17      45 ..      12      45 .. 0.93
   2 ?   -3.5   0.0       3.5   1.3e+04      45      58 ..     165     178 ..     155     180 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.6e-05
     DUF2990 36 IeeakdsikapaaCdtSkislPsyasgLP 64
                I+  k++i+ +++C +S   lPs + +LP
  KHJ32852.1 17 INGRKQNISRSNSCKISTFGLPSPPMSLP 45
                88899**********************99 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 3.5
     DUF2990  45 apaaCdtSkislPs 58 
                  +++ d+ ki+ P+
  KHJ32852.1 165 LTMTQDAAKITSPA 178
                 56777888998887 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.5   0.00089       3.2      14      26 .]     114     126 ..      91     126 .. 0.85
   2 ?    4.4   0.1     0.015        55       2      12 ..     130     140 ..     130     144 .. 0.92

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00089
   zf-H2C2_2  14 pyeCplCdkaFkt 26 
                 +++C++C+k +k+
  KHJ32852.1 114 ELKCDKCGKEYKH 126
                 58*********98 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.015
   zf-H2C2_2   2 LrrHirkHtge 12 
                 L++H+ +Ht+e
  KHJ32852.1 130 LSKHLWEHTPE 140
                 89*******98 PP

>> zf-BED  BED zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   3.6   8.2e-05      0.29      13      40 ..     111     135 ..     105     153 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 8.2e-05
                 GSS--EETTTTEE----SSTHHHHHHHH CS
      zf-BED  13 keqkavCryCgkilsrgggttnLkrHLr 40 
                 ++   +C  Cgk+++ +   ++L++HL+
  KHJ32852.1 111 CSSELKCDKCGKEYKHS---SCLSKHLW 135
                 566789**********7...99999995 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   4.4   0.00055         2       2      23 ..     116     137 ..     115     138 .. 0.93
   2 ?   -3.6   0.0         5   1.8e+04       9      20 ..     142     153 ..     141     154 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00055
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlkth 23 
                 kC+ Cgk ++ ++ L++Hl  h
  KHJ32852.1 116 KCDKCGKEYKHSSCLSKHLWEH 137
                 8*********9999****9988 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 5
   zf-C2H2_4   9 sFsskkaLlrHl 20 
                 s++sk  +++H 
  KHJ32852.1 142 SYTSKLLISKHQ 153
                 566666668895 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1192  (0.0664845); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.31s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2639.81
//
Query:       KHJ32853.1  [L=502]
Description: hypothetical protein EV44_g5271 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0012   18.5   2.1       0.15   11.8   0.0    3.4  3  TPR_11    TPR repeat
  ------ inclusion threshold ------
      0.011   16.0   0.2        1.1    9.8   0.0    2.9  2  TPR_17    Tetratricopeptide repeat
      0.031   14.4   2.4         13    6.2   0.0    4.3  4  TPR_2     Tetratricopeptide repeat
       0.18   12.0   0.0       0.52   10.5   0.0    1.7  1  SPEG_u2   Unstructured region on SPEG complex protein
       0.43   10.5   4.2        6.2    6.8   0.0    3.6  5  TPR_1     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.1     0.011        40      11      30 ..      56      75 ..      55      85 .. 0.78
   2 !   11.8   0.0   4.1e-05      0.15      18      37 ..     112     131 ..     103     133 .. 0.82
   3 ?   -0.9   0.0      0.39   1.4e+03      10      22 ..     336     348 ..     335     349 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.011
      TPR_11 11 eeAieaYkkAlkldPdnaea 30
                + Aie+Y++ l+  +d+ ++
  KHJ32853.1 56 NRAIECYNEGLEKYQDSYDL 75
                68*******99977766555 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 4.1e-05
      TPR_11  18 kkAlkldPdnaeayynLGla 37 
                 k Al+l+Pdn+++++n +++
  KHJ32853.1 112 KLALALSPDNPDILFNTAQI 131
                 559************98775 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.39
      TPR_11  10 yeeAieaYkkAlk 22 
                 + e++ aY+kAl 
  KHJ32853.1 336 FAESLIAYNKALH 348
                 5688889****95 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.1     0.042   1.5e+02       1      23 [.      61      83 ..      61      91 .. 0.87
   2 ?    9.8   0.0   0.00031       1.1       5      24 ..     114     133 ..     112     142 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.042
      TPR_17  1 lylkaleldPnnadaynnLAell 23
                +y + le++ ++ d+ +n+ +++
  KHJ32853.1 61 CYNEGLEKYQDSYDLAYNKSRVQ 83
                89****************98765 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00031
      TPR_17   5 aleldPnnadaynnLAelll 24 
                 al+l P+n+d ++n A++l 
  KHJ32853.1 114 ALALSPDNPDILFNTAQILT 133
                 8999*************996 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0035        13      10      32 ..      48      70 ..      46      72 .. 0.77
   2 ?   -2.2   0.0       1.8   6.3e+03      27      34 .]     114     121 ..     103     121 .. 0.82
   3 ?   -1.9   0.0       1.5   5.2e+03      18      30 ..     155     167 ..     154     169 .. 0.81
   4 ?    4.9   0.0    0.0094        34      14      30 ..     333     349 ..     331     350 .. 0.89

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0035
       TPR_2 10 ayyklgdyeeAleafekAleldP 32
                a+  +  +++A+e++++ le + 
  KHJ32853.1 48 AAKSMRFFNRAIECYNEGLEKYQ 70
                5556666899*********9876 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.8
       TPR_2  27 AleldPnn 34 
                 Al+l P+n
  KHJ32853.1 114 ALALSPDN 121
                 99999997 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.5
       TPR_2  18 eeAleafekAlel 30 
                 eeAl +f+ +++ 
  KHJ32853.1 155 EEALGLFQSCIQM 167
                 8999999988875 PP

  == domain 4  score: 4.9 bits;  conditional E-value: 0.0094
       TPR_2  14 lgdyeeAleafekAlel 30 
                 l d++e l a++kAl l
  KHJ32853.1 333 LCDFAESLIAYNKALHL 349
                 789***********976 PP

>> SPEG_u2  Unstructured region on SPEG complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00014      0.52      10      38 ..      20      48 ..      15      53 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00014
     SPEG_u2 10 ssPitsDeeyLsPPeefPePeeaWhktsa 38
                s+ + s +eyL+   ef e +e W    a
  KHJ32853.1 20 STALNSADEYLAAAVEFEEAGEKWRGGDA 48
                778899******************86655 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0    0.0017       6.2      17      32 ..      55      70 ..      50      72 .. 0.87
   2 ?   -2.8   0.0       1.9   6.9e+03      27      34 .]     114     121 ..     107     121 .. 0.85
   3 ?   -2.8   0.0       1.9   6.8e+03      18      29 ..     155     166 ..     154     168 .. 0.78
   4 ?    3.3   0.0     0.023        81      14      30 ..     333     349 ..     331     350 .. 0.87
   5 ?   -3.1   0.1       2.4   8.6e+03      18      25 ..     421     428 ..     420     428 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0017
                HHHHHHHHHHHHHHST CS
       TPR_1 17 ydeAleyyekALelnP 32
                ++ A+e+y++ Le + 
  KHJ32853.1 55 FNRAIECYNEGLEKYQ 70
                678*********9765 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.9
                 HHHHSTTH CS
       TPR_1  27 ALelnPnn 34 
                 AL l P+n
  KHJ32853.1 114 ALALSPDN 121
                 99999997 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1.9
                 HHHHHHHHHHHH CS
       TPR_1  18 deAleyyekALe 29 
                 +eAl  ++ +++
  KHJ32853.1 155 EEALGLFQSCIQ 166
                 899999998887 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.023
                 TT-HHHHHHHHHHHHHH CS
       TPR_1  14 lgkydeAleyyekALel 30 
                 l ++ e l +y+kAL l
  KHJ32853.1 333 LCDFAESLIAYNKALHL 349
                 5689999********87 PP

  == domain 5  score: -3.1 bits;  conditional E-value: 2.4
                 HHHHHHHH CS
       TPR_1  18 deAleyye 25 
                 + A++yy+
  KHJ32853.1 421 KNAEKYYR 428
                 67999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (502 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 3747.63
//
Query:       KHJ32854.1  [L=331]
Description: hypothetical protein EV44_g0365 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2404.66
//
Query:       KHJ32855.1  [L=105]
Description: hypothetical protein EV44_g0224 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       541  (0.0301746); expected 358.6 (0.02)
Passed bias filter:                      205  (0.011434); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 826.50
//
Query:       KHJ32856.1  [L=562]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.071   13.2   0.5      0.071   13.2   0.5    2.8  3  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   1.4         1   1.8e+04       3       8 ..     432     437 ..     431     438 .. 0.79
   2 ?   13.2   0.5   3.9e-06     0.071       2      16 ..     449     463 ..     448     465 .. 0.91
   3 ?    2.3   2.0     0.011     2e+02       2       9 ..     468     475 ..     468     475 .. 0.89

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 1
                 TSSSSS CS
     zf-CCHC   3 CynCGe 8  
                 C +C++
  KHJ32856.1 432 CKRCNG 437
                 999985 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 3.9e-06
                 CTSSSSSSSSTTTTS CS
     zf-CCHC   2 kCynCGepGHiardC 16 
                  C nCG++ H a  C
  KHJ32856.1 449 SCANCGSTNHTADIC 463
                 6***********999 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.011
                 CTSSSSSS CS
     zf-CCHC   2 kCynCGep 9  
                 kC nCG+p
  KHJ32856.1 468 KCKNCGGP 475
                 7*****86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (562 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       905  (0.0504769); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.21s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4368.05
//
Query:       KHJ32857.1  [L=638]
Description: putative autophagy protein atg13 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-64  217.0   0.0    4.6e-64  216.4   0.0    1.3  1  ATG13     Autophagy-related protein 13
  ------ inclusion threshold ------
      0.064   13.3   0.8       0.13   12.3   0.8    1.5  1  CtIP_N    Tumour-suppressor protein CtIP N-terminal domain


Domain annotation for each model (and alignments):
>> ATG13  Autophagy-related protein 13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.4   0.0   5.1e-68   4.6e-64       1     240 []      73     310 ..      73     310 .. 0.94

  Alignments for each domain:
  == domain 1  score: 216.4 bits;  conditional E-value: 5.1e-68
                 HHHHHHHHHHHHHHTT--.---------S--B-GGGEEB---HHHHHHHCCCCCS-TCTTT.--EEEEEEEETTT--TT-EEEEE-TTS-EEEEE.... CS
       ATG13   1 IqnfftKaaliilqsrlt.ksssesssskklnkWFnlelddtdlfkeelrlWksvssllenpppliievyLdlsdlssnqvlvlkdesgkrwdvd.... 94 
                 Iqnf+ Kaa ++lqsr++     +++++kk+nkWF++e+ddt+lf++el++Wk+++s++++pppliie+y+d+s l+ +q+lvl+++ gkrwd      
  KHJ32857.1  73 IQNFHIKAAILVLQSRISlPIVITQEGTKKVNKWFQIETDDTNLFRQELSIWKQCGSYSDRPPPLIIETYIDASGLNRSQSLVLVSDTGKRWDALgafn 171
                 8*****************6245688*******************************8888899************************************ PP

                 ........ECCC-SEEEEEEEEEEEE-S-------------HHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHCHTT------EEEEEEECTTS----TT CS
       ATG13  95 ..ssdsekkgskkteivLErWlleldstsssetsdeaselelptvyKksivlfRsLytllrlLPayklsrklaksknsepalkigcRildgskpisskg 191
                     ++ +++s+  ei+LErW+ el++ +s++  d++s+l  pt+yKk iv+fRsLy++++++Pa +l r l+k+ +  + +ki+cRil+g+    +++
  KHJ32857.1 172 naYGEDLRHSSRCCEIILERWKFELRDLPSEDVYDFGSTL--PTIYKKFIVFFRSLYATTKFVPAGRLIRTLTKNCSVGSPIKINCRILNGK--APNSN 266
                 9966778999********************99999**999..***********************************9999***********..67778 PP

                 SB-TT---SCCCGT-----TTEEEEE---EEETTEEEEEEEEEES--EC CS
       ATG13 192 eiglskpliasesnaenseehleqykftpietplGrlslsvtYRndcdF 240
                 ++ l+ p++ + +       ++++y ++ +etp+G+  + v+YR+dcdF
  KHJ32857.1 267 FDPLTFPIFDNGK-----IPVTTDYVLGTTETPVGQVYAVVSYRQDCDF 310
                 9*******96444.....469***************************9 PP

>> CtIP_N  Tumour-suppressor protein CtIP N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.8   1.5e-05      0.13      16      63 ..     590     637 ..     585     638 .] 0.93

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.5e-05
      CtIP_N  16 vqglqekvlelkkercldaqrleelfsknqqlreqqkalkenikvlen 63 
                 v + q+ ++  ++   + a+r+++ +sk q lre ++al+e+++  en
  KHJ32857.1 590 VLERQKTLKSFENTSEMAAKRMSAQLSKYQSLRESHNALTESMSSCEN 637
                 77889999999********************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (638 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1010  (0.0563333); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 4262.73
//
Query:       KHJ32858.1  [L=266]
Description: hypothetical protein EV44_g4159 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.097   12.3   0.0       0.18   11.4   0.0    1.4  1  POM121    POM121 family


Domain annotation for each model (and alignments):
>> POM121  POM121 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   9.9e-06      0.18     120     193 ..      77     148 ..      67     162 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 9.9e-06
      POM121 120 sspassrsqtperpakkvreeegqsssssaslksdkekqeekaadtpsgkkqnsrnssptsgssrprKRKipLl 193
                    ++sr  + +r   k+  e+g++s+s+ s++s  +k++++a   + + k+++ +  p+ g++r+ +R i  l
  KHJ32858.1  77 LAEGASRLMLGQRVYYKI--ENGPKSNSNNSMNSWASKAAGTAIGETISLKKQVLKGNPSRGQNRKDRRIIIRL 148
                 555678888888998899..999*************99999999988888888889*************86554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       640  (0.0356964); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1894.02
//
Query:       KHJ32859.1  [L=735]
Description: putative ribonuclease h-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-06   27.3   0.0      1e-05   26.2   0.0    1.6  1  RNase_T   Exonuclease


Domain annotation for each model (and alignments):
>> RNase_T  Exonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   5.7e-10     1e-05       2     164 ..     327     480 ..     326     481 .. 0.76

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 5.7e-10
                 EEEEEESSSTTCTTS-EEEEEEEEEETTCCEEEEEEEEEEEHSSHCSSSHHHHHHHHHCHHHHHTCEBHHHHHHHHHHHHHHHTCCCETTTCEEEESSH CS
     RNase_T   2 viDlEttgldakekdeiieiaaisidggeneigetfhfyvkptelakltdecteftgitqemldeapsfkevleefkellrklallvahnaafdvgflr 100
                 +iD+E+  +      +++ i  +  dg+        + +v+p+++  + +++t+++git ++l++  ++ + ++   + l   +l   h +++++g++ 
  KHJ32859.1 327 AIDCEMCLTGE-SEFSLTRISIVGWDGSV-----VLDELVRPEKP--IINYLTQYSGITEKKLENVTTTLSDIQ---KKLI--TL--LHPRSILIGHSL 410
                 79***999998.67777777777777777.....5889*******..*****************9977764444...4444..23..456899****** PP

                 HHHHHHHHHHHHHHHHCSEHCECHHHHHHHHHC..HHHHHHHHHTTCHSSSS.........TSSHHHHHHHHHHH CS
     RNase_T 101 aadkrilkkevpkrnqfldtlildkatlkelar..tsldklaeklgleedgr.........aHrAldDaeatakl 164
                 + d   lk++   +++++dt+il             sl+ la++++  e+++          H++++Da++++ l
  KHJ32859.1 411 NSDLTALKLT---HPYIIDTVILYPHPRGP--PlrSSLKWLAQRFLSREIQKghgtdgpgaGHDSIEDAKTCIDL 480
                 *****99994...56999999994444333..1458888888888888888765555555559999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (735 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.25s 00:00:00.88 Elapsed: 00:00:00.42
# Mc/sec: 5249.79
//
Query:       KHJ32860.1  [L=245]
Description: putative 14-3-3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.8e-98  326.1   2.3    1.1e-97  325.9   2.3    1.0  1  14-3-3    14-3-3 protein


Domain annotation for each model (and alignments):
>> 14-3-3  14-3-3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  325.9   2.3  6.4e-102   1.1e-97      18     222 .]       1     206 [.       1     206 [. 0.99

  Alignments for each domain:
  == domain 1  score: 325.9 bits;  conditional E-value: 6.4e-102
                 HCHHHHCSS---HCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCTCC.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHCH.-SHHHHHHHHHHH CS
      14-3-3  18 mkkvvelkeeLskeernlLsvayKnvvgarRaswrvlssieqkeeske.ekkvelikeyrekiekeLkeiceevlelldktlipkatseeskvfylkmk 115
                 mk+v++l+ eL+++ernlLsvayKnvvg+rRaswr++ssieqkeesk+ ek+v++i+eyr+kie+eL+++c++vl++ld+ lipka++ eskvfy+kmk
  KHJ32860.1   1 MKEVAKLSGELTVDERNLLSVAYKNVVGTRRASWRIISSIEQKEESKGsEKHVSTIREYRQKIETELEKVCRDVLDVLDESLIPKAETGESKVFYHKMK 99 
                 9***********************************************99*********************************99************** PP

                 HHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHTTTGCC-HHHHHHHHHHHHHHHCTT--HHHHHHHHHHHHHCCHCCCCCS.TTTHHHHHHHHHHH CS
      14-3-3 116 gDyyRYlaEfaegeekkeaaekakeaYeeAleiakkelqpthpirLglaLNySVflyeilnspekAcelakkafdeaiaeldelseesykdstlilqlL 214
                 gDy+RYlaEfa+ge++k+aa++a+eaY++A+++a++el++thpirLglaLN+SVf+yeilnsp++Ac+lak+afd+a+aeld+lse+sy+dstli+qlL
  KHJ32860.1 100 GDYHRYLAEFASGEKRKDAATAAHEAYKNATDVAQTELTSTHPIRLGLALNFSVFYYEILNSPDRACHLAKQAFDDAVAELDKLSEDSYRDSTLIMQLL 198
                 *************************************************************************************************** PP

                 HHHHHHHC CS
      14-3-3 215 rdnltlWt 222
                 rdnltlWt
  KHJ32860.1 199 RDNLTLWT 206
                 *******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1054  (0.0587874); expected 358.6 (0.02)
Passed bias filter:                      575  (0.0320709); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1827.99
//
Query:       KHJ32861.1  [L=240]
Description: putative calcium binding modulator protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-26   87.9   6.1    7.1e-07   28.3   0.1    5.4  5  EF-hand_1   EF hand
    2.4e-20   70.6   6.2    0.00031   20.4   0.0    5.3  5  EF-hand_6   EF-hand domain
      5e-19   67.9   6.0    1.1e-08   34.7   0.0    4.3  4  EF-hand_8   EF-hand domain pair
      5e-18   65.3   2.6    9.1e-06   26.0   0.0    3.4  3  EF-hand_7   EF-hand domain pair
    1.2e-12   46.7   4.0     0.0095   15.4   0.1    4.8  5  EF-hand_5   EF hand
  ------ inclusion threshold ------
      0.027   14.4   1.3       0.26   11.2   0.1    2.5  3  EF-hand_4   Cytoskeletal-regulatory complex EF hand
      0.044   13.7   0.2      0.064   13.2   0.2    1.2  1  SSFA2_C     Sperm-specific antigen 2 C-terminus
       0.11   12.8   0.0       0.35   11.2   0.0    1.9  1  EF-hand_14  EF-hand domain


Domain annotation for each model (and alignments):
>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   2.8e-05     0.063       4      26 ..      79     101 ..      76     104 .. 0.89
   2 !   28.3   0.1   3.2e-10   7.1e-07       2      26 ..     114     138 ..     113     141 .. 0.92
   3 !   21.5   0.0   4.7e-08   0.00011       2      27 ..     144     169 ..     143     171 .. 0.91
   4 !    8.1   0.0   0.00093       2.1       4      20 ..     182     198 ..     179     205 .. 0.90
   5 !   16.0   0.5   2.8e-06    0.0063       4      19 ..     212     227 ..     209     233 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.8e-05
                 HHHHHHTTTSSSEEEHHHHHHHH CS
   EF-hand_1   4 eiFrefDkDgdGkIdfeEfkell 26 
                 e+ + +Dk+g+  ++ +E++++l
  KHJ32861.1  79 ELYQAVDKNGNCLLSEKELRQAL 101
                 77899****************98 PP

  == domain 2  score: 28.3 bits;  conditional E-value: 3.2e-10
                 HHHHHHHHTTTSSSEEEHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkell 26 
                 +k ++r+fD++++G I+feEf+ l+
  KHJ32861.1 114 VKMMIRLFDTNQNGGINFEEFCGLW 138
                 799*******************887 PP

  == domain 3  score: 21.5 bits;  conditional E-value: 4.7e-08
                 HHHHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkellk 27 
                 ++ iF+ fD D++G I+++E+ ++l 
  KHJ32861.1 144 WRSIFDRFDSDKSGNISINEYANALI 169
                 689******************99985 PP

  == domain 4  score: 8.1 bits;  conditional E-value: 0.00093
                 HHHHHHTTTSSSEEEHH CS
   EF-hand_1   4 eiFrefDkDgdGkIdfe 20 
                  +F+++Dk g G I+f+
  KHJ32861.1 182 MLFKKYDKRGVGAISFD 198
                 68*************98 PP

  == domain 5  score: 16.0 bits;  conditional E-value: 2.8e-06
                 HHHHHHTTTSSSEEEH CS
   EF-hand_1   4 eiFrefDkDgdGkIdf 19 
                 ++F+++D D+dG+I++
  KHJ32861.1 212 NVFKKYDDDRDGYITL 227
                 79************96 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   2.2e-05     0.049       2      27 ..      77     102 ..      76     105 .. 0.91
   2 !   11.4   0.0   0.00011      0.25       7      24 ..     119     136 ..     114     142 .. 0.86
   3 !   20.4   0.0   1.4e-07   0.00031       2      27 ..     144     169 ..     143     172 .. 0.90
   4 !    7.5   0.0     0.002       4.5       3      23 ..     181     201 ..     179     207 .. 0.84
   5 !   16.5   0.7   2.6e-06    0.0058       3      19 ..     211     227 ..     209     233 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.2e-05
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrkalr 27 
                 l+e++++ Dk+g+  ++ +Elr+al 
  KHJ32861.1  77 LWELYQAVDKNGNCLLSEKELRQALV 102
                 67999*******************95 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00011
   EF-hand_6   7 klfDkdgdGkidaeElrk 24 
                 +lfD++ +G i++eE+  
  KHJ32861.1 119 RLFDTNQNGGINFEEFCG 136
                 79**************75 PP

  == domain 3  score: 20.4 bits;  conditional E-value: 1.4e-07
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrkalr 27 
                 +r++F+ fD d++G i+++E  +al 
  KHJ32861.1 144 WRSIFDRFDSDKSGNISINEYANALI 169
                 79******************999986 PP

  == domain 4  score: 7.5 bits;  conditional E-value: 0.002
   EF-hand_6   3 reaFklfDkdgdGkidaeElr 23 
                 + +Fk++Dk g G i+++ ++
  KHJ32861.1 181 YMLFKKYDKRGVGAISFDLFV 201
                 579*************98765 PP

  == domain 5  score: 16.5 bits;  conditional E-value: 2.6e-06
   EF-hand_6   3 reaFklfDkdgdGkida 19 
                   +Fk++D d+dG+i+ 
  KHJ32861.1 211 TNVFKKYDDDRDGYITL 227
                 579**********9996 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.0   5.1e-12   1.1e-08       5      52 ..      92     138 ..      90     139 .. 0.88
   2 !   12.6   0.1   4.2e-05     0.095      29      51 ..     145     167 ..     144     168 .. 0.91
   3 !   12.0   0.0   6.6e-05      0.15      17      49 ..     171     201 ..     166     203 .. 0.87
   4 !    9.3   0.2   0.00044      0.98      28      45 ..     210     227 ..     205     234 .. 0.76

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 5.1e-12
   EF-hand_8   5 Itreelrrilrilglkk..glseeevdilfrefDtdgdGkisfeEFcvll 52 
                 ++  elr +l   +  +   + ++ v +++r+fDt+++G i+feEFc l+
  KHJ32861.1  92 LSEKELRQAL---VNGDwtLFDPYTVKMMIRLFDTNQNGGINFEEFCGLW 138
                 5778999988...44477779***************************98 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 4.2e-05
   EF-hand_8  29 dilfrefDtdgdGkisfeEFcvl 51 
                 +++f++fD d++G is +E+ + 
  KHJ32861.1 145 RSIFDRFDSDKSGNISINEYANA 167
                 689****************9875 PP

  == domain 3  score: 12.0 bits;  conditional E-value: 6.6e-05
   EF-hand_8  17 lglkkglseeevdilfrefDtdgdGkisfeEFc 49 
                 +g++  ls++ v +lf++ D  g G+isf+ F+
  KHJ32861.1 171 FGYR--LSDKFVYMLFKKYDKRGVGAISFDLFV 201
                 4888..99999******************9776 PP

  == domain 4  score: 9.3 bits;  conditional E-value: 0.00044
   EF-hand_8  28 vdilfrefDtdgdGkisf 45 
                 ++ +f++ D d+dG+i++
  KHJ32861.1 210 MTNVFKKYDDDRDGYITL 227
                 5678***********964 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   4.1e-09   9.1e-06       6      69 ..      79     137 ..      74     139 .. 0.92
   2 !   25.5   0.1   6.1e-09   1.4e-05       6      68 ..     146     202 ..     143     205 .. 0.91
   3 !   12.3   0.2   8.1e-05      0.18       4      21 ..     210     227 ..     207     237 .. 0.69

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 4.1e-09
   EF-hand_7   6 eaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkl 69 
                 e +++ D++g+  l++ el+++l +     g    +++  ++ +++ fDt+++G i+f+EF+ l
  KHJ32861.1  79 ELYQAVDKNGNCLLSEKELRQALVN-----GDWTLFDPYTVKMMIRLFDTNQNGGINFEEFCGL 137
                 56899****************9999.....9999999************************975 PP

  == domain 2  score: 25.5 bits;  conditional E-value: 6.1e-09
   EF-hand_7   6 eaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlk 68 
                  +F+ +D+d++g ++ +e+ ++l         g  lsd+ +  lfk+ D+++ G isfd F++
  KHJ32861.1 146 SIFDRFDSDKSGNISINEYANALI------AFGYRLSDKFVYMLFKKYDKRGVGAISFDLFVQ 202
                 57****************999999......7789999*********************97776 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 8.1e-05
   EF-hand_7   4 lkeaFkelDtdgdgyldk 21 
                 +  +Fk++D d+dgy++ 
  KHJ32861.1 210 MTNVFKKYDDDRDGYITL 227
                 556677777777777764 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.022        49       6      23 ..      82      99 ..      82     102 .. 0.82
   2 !   13.1   0.0   2.2e-05      0.05       5      21 ..     118     134 ..     114     140 .. 0.90
   3 !   15.4   0.1   4.3e-06    0.0095       4      22 ..     147     165 ..     145     169 .. 0.87
   4 ?   -3.4   0.0       3.7   8.3e+03       5      10 ..     184     189 ..     183     191 .. 0.86
   5 !   12.1   0.1   4.6e-05       0.1       4      18 ..     213     227 ..     211     228 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.022
                HHH-SS-SSCE-HHHHHH CS
   EF-hand_5  6 qaiDlNgDGkIskeELkt 23
                qa+D+Ng   +s  EL++
  KHJ32861.1 82 QAVDKNGNCLLSEKELRQ 99
                799****99999999987 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 2.2e-05
                 HHHH-SS-SSCE-HHHH CS
   EF-hand_5   5 FqaiDlNgDGkIskeEL 21 
                  + +D+N+ G I++eE+
  KHJ32861.1 118 IRLFDTNQNGGINFEEF 134
                 689*************9 PP

  == domain 3  score: 15.4 bits;  conditional E-value: 4.3e-06
                 HHHHH-SS-SSCE-HHHHH CS
   EF-hand_5   4 tFqaiDlNgDGkIskeELk 22 
                  F+++D +++G Is+ E  
  KHJ32861.1 147 IFDRFDSDKSGNISINEYA 165
                 6***************975 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 3.7
                 HHHH-S CS
   EF-hand_5   5 FqaiDl 10 
                 F++ D+
  KHJ32861.1 184 FKKYDK 189
                 999997 PP

  == domain 5  score: 12.1 bits;  conditional E-value: 4.6e-05
                 HHHHH-SS-SSCE-H CS
   EF-hand_5   4 tFqaiDlNgDGkIsk 18 
                 +F++ D ++DG+I+ 
  KHJ32861.1 213 VFKKYDDDRDGYITL 227
                 7************85 PP

>> EF-hand_4  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   0.00012      0.26       9      66 ..      74     135 ..      67     152 .. 0.77
   2 ?   -1.4   0.0         1   2.3e+03      47      68 ..     146     167 ..     141     180 .. 0.82
   3 ?    0.6   0.1      0.25   5.5e+02      37      66 ..     202     233 ..     192     237 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00012
   EF-hand_4   9 ikkyweifsglkpedn.kltgdkvapvlknsk..l.eedklekiwdladidedgkldfeefc 66 
                  +  we++++++++ n  l+++++ + l n    l +   ++ +  l d +++g ++feefc
  KHJ32861.1  74 RRVLWELYQAVDKNGNcLLSEKELRQALVNGDwtLfDPYTVKMMIRLFDTNQNGGINFEEFC 135
                 5668******97766515677778888888752241456788899****************9 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1
   EF-hand_4  47 kiwdladidedgkldfeefcia 68 
                 +i+d  d d+ g++  +e++ a
  KHJ32861.1 146 SIFDRFDSDKSGNISINEYANA 167
                 5778889999999999998755 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.25
   EF-hand_4  37 nskleedklekiwdladidedg..kldfeefc 66 
                 +s ++ ++++++++  d d dg  +l fe+f 
  KHJ32861.1 202 QSCISLKRMTNVFKKYDDDRDGyiTLSFEDFL 233
                 56677788899999999999994457899996 PP

>> SSFA2_C  Sperm-specific antigen 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   2.9e-05     0.064      16      73 ..      34      86 ..      21     104 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.9e-05
     SSFA2_C 16 ssflsplslpaaprasqsspyralsrsklpaaaPPpassstemqLrrvLhdirgtvqs 73
                +  + p +lp++++++qs +yr++      ++ PP +++ te+  rrvL ++ ++v +
  KHJ32861.1 34 YMNKPPPPLPQSKPMKQSLNYRYSQ-----TSRPPVSPTETEVADRRVLWELYQAVDK 86
                2222344555555555555554444.....477999999************9999875 PP

>> EF-hand_14  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00016      0.35       5      44 ..     147     186 ..     145     217 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00016
  EF-hand_14   5 lfdlfkdeetdklsvakllkaLaetGirkdDpRLkellkk 44 
                 +fd f++++++++s+++  +aL ++G r +D  +  l+kk
  KHJ32861.1 147 IFDRFDSDKSGNISINEYANALIAFGYRLSDKFVYMLFKK 186
                 9***************************999777666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1817.20
//
Query:       KHJ32862.1  [L=351]
Description: hypothetical protein EV44_g4333 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-07   30.2   0.8    4.7e-07   29.5   0.8    1.3  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type
  ------ inclusion threshold ------
      0.044   14.1   0.9       0.11   12.8   0.9    1.7  1  FAM219A          Protein family FAM219A


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.8   5.3e-11   4.7e-07       4     136 ..      88     222 ..      85     224 .. 0.88

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 5.3e-11
  Retrotran_gag_2   4 kdakalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsa....lgvkiddedk 93 
                      ++a a+ ++++s+s +   l +e +ta+++W   +++y+++++++   ++    ++ + +  s+ +  +kl++l ++L +    ++++  d  +
       KHJ32862.1  88 DEATAIDFLFKSLSLDDQALNDEYDTAYDLWFYVNKTYQQTDPTTANEYMTLIQKFTIGDM-SIINAWDKLKDLRRKLCTadpeAKDTYRDRVL 180
                      678899999999999999999*********************9999988888888888877.9***************9955555566667779 PP

  Retrotran_gag_2  94 vvllLasLPesyetfvtaiesseedltleevieklleeeerrk 136
                      +++l + LP+++   ++++++ + dl++ee  ++l+  e+r+ 
       KHJ32862.1 181 LLILIRALPKDFTSTIDTLDA-QPDLSVEEKLKRLQIKESRLV 222
                      9999****************9.899**********99999876 PP

>> FAM219A  Protein family FAM219A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.9   1.3e-05      0.11      17      59 ..     308     350 ..     289     351 .] 0.66

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.3e-05
     FAM219A  17 lasavesqPkktrkrsvkfnkgyaalsqepdeklvsldsdsde 59 
                  +s  +s Pk+ ++  +k  k+y alsq+ +++  sl +d  +
  KHJ32862.1 308 NPSRPSSLPKHRKRTDLKKSKAYEALSQSNSDTEASLTTDESD 350
                 23333455666666779********************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2813.54
//
Query:       KHJ32863.1  [L=298]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 2390.59
//
Query:       KHJ32864.1  [L=358]
Description: putative altered inheritance of mitochondria protein 3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.94   10.5   0.0       0.94   10.5   0.0    3.7  3  AIM3      Altered inheritance of mitochondria protein 3


Domain annotation for each model (and alignments):
>> AIM3  Altered inheritance of mitochondria protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   5.3e-05      0.94      55      81 ..      46      72 ..      23      80 .. 0.82
   2 ?   -1.2   2.2      0.23   4.1e+03      48      80 ..     179     213 ..     124     221 .. 0.70
   3 ?   -3.3   5.1         1   1.8e+04      49      80 ..     292     325 ..     262     334 .. 0.54

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 5.3e-05
        AIM3 55 eededydtstsleslrdprsFppPPlk 81
                ++  + + +++l+slrdp++F +PP +
  KHJ32864.1 46 QNTTQNHVPQPLQSLRDPATFGSPPRR 72
                34456678999**************87 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.23
        AIM3  48 ddsdeereededydtstsleslrdprsFp..pPPl 80 
                 dd ++e ++ ++  + ++++s ++p+s++  +PPl
  KHJ32864.1 179 DDFRSEFNQASRLASMIKPRSHEEPNSYSssSPPL 213
                 44444555555555667777777777775225887 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 1
        AIM3  49 dsdeereededydtstsleslrd..prsFppPPl 80 
                 ++d+++ ++e++ +++ +e+l d  +++ ppPP 
  KHJ32864.1 292 SEDSSKISNEKFVNGQIHEPLTDilVKKRPPPPP 325
                 3444444444444555555555533344444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.20s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2926.17
//
Query:       KHJ32865.1  [L=595]
Description: putative protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-52  178.5   0.0    8.1e-52  176.2   0.0    1.9  1  Pkinase          Protein kinase domain
    1.2e-20   73.9   0.0    1.5e-19   70.3   0.0    2.3  2  Pkinase_Tyr      Protein tyrosine kinase
  ------ inclusion threshold ------
      0.076   12.0   0.1       0.15   11.0   0.1    1.4  1  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
      0.091   12.1   0.2        4.8    6.4   0.0    2.3  2  Kinase-like      Kinase-like


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.2   0.0   1.8e-55   8.1e-52       1     264 []     209     551 ..     209     551 .. 0.84

  Alignments for each domain:
  == domain 1  score: 176.2 bits;  conditional E-value: 1.8e-55
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS......CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH.HH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk......hpnivrlyevfeekdelylvleyveggeladlle.rk 92 
                 y++ + lG+G+fGkV++a++++++k vA+K+i+  ++  +     + E+++l +lk       ++ ++l ++f    ++++v++++  ++++d+l+ ++
  KHJ32865.1 209 YQVTKLLGQGTFGKVVEARDRRRNKLVAIKIIRSVQKYRDAS---RIELRVLSTLKandsenRNRCIHLRDCFDYRGHICIVMDLLG-QSVFDFLKsNQ 303
                 78899***************************9887776554...44555555444333333788********************98.66999998533 PP

                 SS.--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEET..............................TTEEEE-SGTTSEESSSSCSBCTTTSC CS
     Pkinase  93 gs.lseeeakkiakqilegleylHskgiiHrDlKpeNiLide..............................kgelKitDFGlakelessskltsfvgt 160
                  + +++++++++a+q+++++++lH+ ++iH DlKpeNiL+ +                              + e++++DFG a+  ++ +  +s+v t
  KHJ32865.1 304 FVpFPNSQIQSFARQLFTSVAFLHDLNLIHTDLKPENILLCDssyqaftysrripssstgvnrqapqrrvllDTEIRLIDFGSATFQDEYH--SSVVST 400
                 336************************************98559**************99999999888888888**********999866..9***** PP

                 GGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS......................... CS
     Pkinase 161 seYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilg.etkeklpeasei......................... 233
                 ++Y+APE++ + + s ++D+Ws+G+il+e++tg  +f+ +++ e + ++++++ + +  ++   ++++     +                         
  KHJ32865.1 401 RHYRAPEIILGLGWSFPCDIWSIGCILVEFFTGDALFQTHDNLE-HLAMMENVCAARLDVKlIHQVNS-----Marknsgnggnvaskyfkrlkldypq 493
                 **************************************555544.33333332222222223223333.....133344789999************** PP

                 ...........................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 234 ...........................seeakdllkkllkkdpkkRltaeellqhpyl 264
                                             ++++dllkk++ +dp+kR+ta+e+lqh+++
  KHJ32865.1 494 pettrasrkfvkamkrlediipdnnkfCKNFLDLLKKIFIYDPEKRITAKEALQHQWF 551
                 ***************************9*****************************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.3   0.0   3.4e-23   1.5e-19       3     221 ..     211     452 ..     209     471 .. 0.83
   2 ?    0.6   0.0     0.063   2.8e+02     210     255 ..     499     545 ..     487     548 .. 0.72

  Alignments for each domain:
  == domain 1  score: 70.3 bits;  conditional E-value: 3.4e-23
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH....HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee....keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkke 96 
                  ++k lG+G+fGkVve++ +    +++  Va+K++++ ++ ++    + ++l+ +k   + + ++ ++l  +   +++++iv++++ + ++ +fL++++
   KHJ32865.1 211 VTKLLGQGTFGKVVEARDR----RRNKLVAIKIIRSVQKYRDasriELRVLSTLKANDSENRNRCIHLRDCFDYRGHICIVMDLLGQ-SVFDFLKSNQ 303
                  6789************999....88899******65444432101122233333333333456688888888899*********976.7889*****9 PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE..............................TTEEEE-STTTHEETTTSSEEEETTS CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse..............................nkvvkisDfGLardiekddeyvkkee 164
                    ++  +++ sfa q+   +++L++ +l+H dl   N+Ll++                              ++ +++ DfG a      dey++  +
   KHJ32865.1 304 FVPFPNSQIQSFARQLFTSVAFLHDLNLIHTDLKPENILLCDssyqaftysrripssstgvnrqapqrrvllDTEIRLIDFGSATFQ---DEYHS--S 396
                  *****************************************99***************************************88866...55543..4 PP

                  STSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTT CS
  Pkinase_Tyr 165 aklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevleklkeg 221
                       ++ apE++     +   D+Ws G +l E ft g+  +++ +n e l+++++ 
   KHJ32865.1 397 VVSTRHYRAPEIILGLGWSFPCDIWSIGCILVEFFT-GDALFQTHDNLEHLAMMENV 452
                  45566899****************************.99999999999888887765 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.063
                  HHHHHHHHHHT.TEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 210 kneevleklke.gkrlekpekcpeelyelmkkcweedpeeRptfsel 255
                   ++++++++k+ +  ++ ++k ++++ +l+kk + +dpe+R t +e 
   KHJ32865.1 499 ASRKFVKAMKRlEDIIPDNNKFCKNFLDLLKKIFIYDPEKRITAKEA 545
                  44455555544134467889999******************998875 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   3.3e-05      0.15     298     316 ..     329     347 ..     275     355 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3.3e-05
  Pox_ser-thr_kin 298 enflhvDlkPdniLifdsk 316
                       n +h+DlkP+niL+ ds+
       KHJ32865.1 329 LNLIHTDLKPENILLCDSS 347
                      489*************996 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.011        48      16      56 ..     211     254 ..     203     275 .. 0.79
   2 ?    6.4   0.0    0.0011       4.8     122     178 ..     288     344 ..     285     349 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.011
  Kinase-like  16 rgellkkgdrsvvfevkdqetgeplavkvfllps...easkkdl 56 
                  + +ll++g +++v+e++d  +++ +a+k+  + +   +as+ +l
   KHJ32865.1 211 VTKLLGQGTFGKVVEARDRRRNKLVAIKIIRSVQkyrDASRIEL 254
                  5689********************99998765542345666665 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0011
  Kinase-like 122 vdl..eilnkvlqkrset...hkkletiarlllTlqlirlaanLqakglvhgkftvdnllld 178
                  +dl  + +++ l++++     + + +  ar+l T      +a L+++ l+h++++++n+ll 
   KHJ32865.1 288 MDLlgQSVFDFLKSNQFVpfpNSQIQSFARQLFTS-----VAFLHDLNLIHTDLKPENILLC 344
                  56666777777777777666677888889999988.....9******************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (595 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.38
# Mc/sec: 4731.16
//
Query:       KHJ32866.1  [L=340]
Description: putative transport protein fsf1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.7e-114  382.1   0.2   1.9e-114  381.9   0.2    1.0  1  Mtc       Tricarboxylate carrier


Domain annotation for each model (and alignments):
>> Mtc  Tricarboxylate carrier
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  381.9   0.2  1.1e-118  1.9e-114       1     312 []      16     340 .]      16     340 .] 0.98

  Alignments for each domain:
  == domain 1  score: 381.9 bits;  conditional E-value: 1.1e-118
         Mtc   1 yDqstflGRlkhffsvtdprtlllseaeleeakelvekykkgklppelteeelwkakklvdSavHPdtgekillpfRmsafvpvnllitggmltpyktt 99 
                 yD+++++GR++h +++ dprtl++s++ +e+ak+l+ +yk g++ ++++ +e+wka+k+vdS++HPdtg +++lpfRms++v +nl++t+gmltp+ ++
  KHJ32866.1  16 YDLGKYWGRVRHAATISDPRTLFVSKSGIESAKNLIAAYKCGEI-KQIN-DEYWKARKIVDSTLHPDTGLPVFLPFRMSCYVFSNLIVTAGMLTPRMGV 112
                 9******************************************7.6665.9************************************************ PP

         Mtc 100 pavifwqwanqsfnaavnytNrnasspistsqlltsyvaAttaavgtalglnsllkrlkk.skatksllgrlvPfaavaaancvNiplmRqkelqkGIe 197
                 +++++wq++nqs+n+a+n++N+n+++p+st + l+sy++A+++++++a+glnsl++r+k+ s+atk++l+rlvPf+ava+a+++N++lmR++e+ +GI+
  KHJ32866.1 113 TGTLLWQITNQSLNVAINSANANKTNPLSTFKTLQSYILAVGTSCSLAVGLNSLVPRMKQfSPATKTILTRLVPFFAVASAGALNVFLMRREEILEGID 211
                 *************************************************************************************************** PP

         Mtc 198 Vtdeegn.................elgkSkkaAkkAisqvalsRvlmaapamvlpplimnalekkkflkkrprlaalpiqlllvglvllfalPlalalF 279
                 V+ e  +                 +lgkSkka+  A+s++alsRvl+++p+mv+ppli+ +l++++flk+rp l+  pi+++l++++++falPlala+F
  KHJ32866.1 212 VYPEVTHsddletahktieesnlvSLGKSKKAGLIAVSETALSRVLNSSPIMVIPPLILLKLQNQNFLKRRPNLTL-PINIGLIFVTSIFALPLALAVF 309
                 ****988999*****************************************************************6.********************** PP

         Mtc 280 pqrssisvskLepelqekikkkkiekvyfNKGL 312
                 pq++ +++s Le+e+ ++  +   +kv fN+G+
  KHJ32866.1 310 PQKQVVDASVLEKEFCASNGE--NRKVSFNRGI 340
                 ******************444..69*******6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       371  (0.0206927); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2725.12
//
Query:       KHJ32867.1  [L=200]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       646  (0.036031); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1628.39
//
Query:       KHJ32868.1  [L=567]
Description: putative kh domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-47  156.7  13.3    2.3e-16   59.4   0.6    3.4  3  KH_1      KH domain
    2.4e-11   43.3   1.1      0.012   15.4   0.1    3.4  3  KH_2      KH domain
    2.2e-10   40.3   0.6      0.032   14.1   0.0    3.4  3  KH_4      KH domain
     0.0033   17.5   3.2        3.2    7.9   0.1    3.5  3  KH_5      NusA-like KH domain
  ------ inclusion threshold ------
       0.17   11.9   0.0         11    6.1   0.0    3.0  3  MOEP19    KH-like RNA-binding domain


Domain annotation for each model (and alignments):
>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.6   0.2     7e-17   2.5e-13       2      65 ..     193     256 ..     192     257 .. 0.91
   2 !   59.4   0.6   6.4e-20   2.3e-16       2      66 .]     297     361 ..     296     361 .. 0.94
   3 !   54.7   1.8   1.8e-18   6.5e-15       2      66 .]     405     469 ..     404     469 .. 0.92

  Alignments for each domain:
  == domain 1  score: 49.6 bits;  conditional E-value: 7e-17
                 EEEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT....T.-EEEEEESHHHHHHHHHHHH CS
        KH_1   2 lrilvPsslvgriIGkgGsnIkeIreetgakIkvpksedeg.sderevtisGspeavekAkelie 65 
                 +++++ ++lvg+iIG+ G+n+++ ++++g++++++   +e+ ++ r+++isG++++  kAk++i+
  KHJ32868.1 193 ESLSIETNLVGLIIGRSGENLRRVEADSGCRVQFI-TGPEEaGPFRQCRISGTRASRMKAKAEIN 256
                 678999*****************************.5555559*******************996 PP

  == domain 2  score: 59.4 bits;  conditional E-value: 6.4e-20
                 EEEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT....T.-EEEEEESHHHHHHHHHHHHH CS
        KH_1   2 lrilvPsslvgriIGkgGsnIkeIreetgakIkvpksedeg.sderevtisGspeavekAkeliee 66 
                  +i vP + vg+iIG+gG++I++++e++g++++++ +e  + ++ r v ++Gs+ea ++Ak+li+e
  KHJ32868.1 297 MQIMVPDKTVGLIIGRGGETIRDLQERSGCHVNIV-GEQKSvNGLRPVNLIGSREAADRAKDLIME 361
                 5799******************************9.666667**********************96 PP

  == domain 3  score: 54.7 bits;  conditional E-value: 1.8e-18
                 EEEEEGGGHHHHHHTGGGHHHHHHHHHHT-EEEEESSTT....T.-EEEEEESHHHHHHHHHHHHH CS
        KH_1   2 lrilvPsslvgriIGkgGsnIkeIreetgakIkvpksedeg.sderevtisGspeavekAkeliee 66 
                 ++i vPs+ vg iIGkgG++Ik+I++ t +kI+v  +++++ + ere+ + G+++++ +A+++iee
  KHJ32868.1 405 ESIFVPSDAVGMIIGKGGETIKDIQSTTACKINVS-PQSGPgEVEREIGLVGTRDSIIAARRAIEE 469
                 689***********************88*****99.555556*********************986 PP

>> KH_2  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.0   0.00011       0.4      31      59 ..     197     225 ..     189     242 .. 0.86
   2 !   13.9   0.1   9.6e-06     0.034      26      59 ..     296     329 ..     290     345 .. 0.81
   3 !   15.4   0.1   3.3e-06     0.012      35      55 ..     413     433 ..     402     441 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00011
                 EEESCHHHHHTGGGHHHHHHHHHHHHHHH CS
        KH_2  31 iresqpgivIGkgGsnikkigkelrkdie 59 
                 i ++  g++IG+ G+n+++++++ + +++
  KHJ32868.1 197 IETNLVGLIIGRSGENLRRVEADSGCRVQ 225
                 567778***************99887775 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 9.6e-06
                 EEEEEEEESCHHHHHTGGGHHHHHHHHHHHHHHH CS
        KH_2  26 rviiviresqpgivIGkgGsnikkigkelrkdie 59 
                    i++ +   g++IG+gG++i+ +++  +  + 
  KHJ32868.1 296 SMQIMVPDKTVGLIIGRGGETIRDLQERSGCHVN 329
                 56788888999***************98876665 PP

  == domain 3  score: 15.4 bits;  conditional E-value: 3.3e-06
                 CHHHHHTGGGHHHHHHHHHHH CS
        KH_2  35 qpgivIGkgGsnikkigkelr 55 
                   g++IGkgG++ik i+++  
  KHJ32868.1 413 AVGMIIGKGGETIKDIQSTTA 433
                 57**************99865 PP

>> KH_4  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0   0.00054       1.9      32      51 ..     194     213 ..     186     214 .. 0.86
   2 !   14.1   0.0     9e-06     0.032      26      55 ..     292     321 ..     283     331 .. 0.90
   3 !   13.9   0.0     1e-05     0.036      32      56 ..     406     430 ..     398     441 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00054
        KH_4  32 elnvegedlGrvIGkrGrtl 51 
                  l++e++ +G++IG+ G++l
  KHJ32868.1 194 SLSIETNLVGLIIGRSGENL 213
                 57899999**********98 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 9e-06
        KH_4  26 eeeveielnvegedlGrvIGkrGrtldAlq 55 
                 + e+++++ v  + +G++IG+ G+t++ lq
  KHJ32868.1 292 DGEDSMQIMVPDKTVGLIIGRGGETIRDLQ 321
                 67889999999***************9777 PP

  == domain 3  score: 13.9 bits;  conditional E-value: 1e-05
        KH_4  32 elnvegedlGrvIGkrGrtldAlqy 56 
                  + v ++ +G +IGk G+t++ +q 
  KHJ32868.1 406 SIFVPSDAVGMIIGKGGETIKDIQS 430
                 57888999*************9986 PP

>> KH_5  NusA-like KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.031   1.1e+02      17      36 ..     200     219 ..     193     231 .. 0.81
   2 !    5.0   0.2     0.007        25       5      47 ..     297     333 ..     293     340 .. 0.77
   3 !    7.9   0.1   0.00091       3.2      17      35 ..     412     430 ..     408     442 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.031
        KH_5  17 dpvGaivgkkGsrikavsse 36 
                 + vG i+g++G++ + v+ +
  KHJ32868.1 200 NLVGLIIGRSGENLRRVEAD 219
                 679***********999765 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.007
        KH_5   5 tkvaVkshnpnvdpvGaivgkkGsrikavsseLkgekidvvew 47 
                 + ++V ++      vG i+g++G+ i+ + +   g  + +v +
  KHJ32868.1 297 MQIMVPDKT-----VGLIIGRGGETIRDLQERS-GCHVNIVGE 333
                 667777777.....*************998775.777777765 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.00091
        KH_5  17 dpvGaivgkkGsrikavss 35 
                 d+vG i+gk+G+ ik + s
  KHJ32868.1 412 DAVGMIIGKGGETIKDIQS 430
                 89*************9987 PP

>> MOEP19  KH-like RNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.0    0.0032        11      16      41 ..     194     219 ..     190     225 .. 0.89
   2 ?    1.2   0.0      0.11   3.8e+02      19      80 ..     301     364 ..     294     369 .. 0.73
   3 ?   -0.2   0.0      0.28   9.9e+02      19      44 ..     409     434 ..     405     455 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0032
      MOEP19  16 vfyleawlleaiFGpdgeripeiEqv 41 
                  + +e++l+ +i G++ge+++ +E  
  KHJ32868.1 194 SLSIETNLVGLIIGRSGENLRRVEAD 219
                 5789*******************975 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.11
      MOEP19  19 leawlleaiFGpdgeripeiEqvsqtllev.kalds.eglaeilifGrprykkrvkkmllslAe 80 
                 +  + + +i G+ ge i+ ++  s   +++    +s +gl  +   G++++  r+k++++++ e
  KHJ32868.1 301 VPDKTVGLIIGRGGETIRDLQERSGCHVNIvGEQKSvNGLRPVNLIGSREAADRAKDLIMEIVE 364
                 5666778899999999999988776544431333445777789999999999999999998766 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.28
      MOEP19  19 leawlleaiFGpdgeripeiEqvsqt 44 
                 + ++ + +i G+ ge i+ i+ +   
  KHJ32868.1 409 VPSDAVGMIIGKGGETIKDIQSTTAC 434
                 66778889**********99987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (567 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       782  (0.0436165); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.39
# Mc/sec: 4378.43
//
Query:       KHJ32869.1  [L=1021]
Description: putative mitochondrial aaa atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-38  132.7   0.0    3.5e-38  131.0   0.0    2.0  1  AAA           ATPase family associated with various cellular 
    5.7e-11   42.0   0.3      2e-10   40.3   0.3    2.0  1  AAA_lid_3     AAA+ lid domain
    1.4e-05   24.9   0.0    3.5e-05   23.6   0.0    1.6  1  RuvB_N        Holliday junction DNA helicase RuvB P-loop doma
    1.5e-05   25.4   0.3    0.00081   19.8   0.0    3.1  3  AAA_16        AAA ATPase domain
    5.5e-05   23.2   0.0     0.0066   16.5   0.0    3.0  2  AAA_14        AAA domain
    5.7e-05   23.4   0.3     0.0071   16.6   0.1    2.9  2  AAA_22        AAA domain
    0.00039   20.6   0.0     0.0015   18.7   0.0    2.1  1  AAA_2         AAA domain (Cdc48 subfamily)
     0.0008   19.2   0.0     0.0024   17.6   0.0    1.7  2  IstB_IS21     IstB-like ATP binding protein
    0.00081   19.6   0.0     0.0022   18.1   0.0    1.8  1  AAA_33        AAA domain
     0.0011   19.0   0.1     0.0041   17.1   0.1    2.1  1  AAA_5         AAA domain (dynein-related subfamily)
     0.0015   17.9   0.0       0.31   10.4   0.0    3.5  4  TniB          Bacterial TniB protein
     0.0034   17.9   0.0      0.014   16.0   0.0    2.1  1  AAA_18        AAA domain
     0.0045   16.2   0.0      0.019   14.2   0.0    2.0  1  TIP49         TIP49 P-loop domain
     0.0079   16.6   0.1      0.086   13.2   0.0    2.8  2  RNA_helicase  RNA helicase
  ------ inclusion threshold ------
       0.01   15.6   0.0      0.024   14.4   0.0    1.6  1  AAA_24        AAA domain
      0.019   14.4   0.0      0.049   13.0   0.0    1.7  1  Mg_chelatase  Magnesium chelatase, subunit ChlI
      0.023   14.6   1.0        3.6    7.4   0.0    3.3  3  ATPase_2      ATPase domain predominantly from Archaea
      0.049   13.2   0.1        1.9    8.0   0.1    2.3  2  AAA_25        AAA domain
      0.065   12.6   0.1       0.93    8.8   0.0    2.4  2  ATPase        KaiC
      0.071   13.3   0.1       0.14   12.4   0.1    1.5  1  AAA_28        AAA domain
      0.075   12.5   0.1       0.74    9.3   0.0    2.7  3  AAA_7         P-loop containing dynein motor region
      0.077   12.1   0.1       0.42    9.6   0.0    2.1  2  Parvo_NS1     Parvovirus non-structural protein NS1
      0.084   12.9   0.0       0.21   11.6   0.0    1.6  1  TsaE          Threonylcarbamoyl adenosine biosynthesis protei


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.0   0.0   4.5e-41   3.5e-38       1     131 [.     704     831 ..     704     832 .. 0.96

  Alignments for each domain:
  == domain 1  score: 131.0 bits;  conditional E-value: 4.5e-41
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH.TTCCCHHHHHHHHHHHHHHHHTTT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr.sgseseeeervvnqLlteldgvkk 98 
                 +llyGppGtGKTllakavake+g+++le+ +++l ++yvge+ek++++lf+ ak+ + p+++fiDE+d++++sr s+++++++++++nq+l+e+dg ++
  KHJ32869.1 704 ILLYGPPGTGKTLLAKAVAKESGATVLEVTAADLNNMYVGEGEKNVKALFTLAKKLS-PCVIFIDEVDSIFGSReSSRQRTSHREMINQFLREWDGISD 801
                 69******************************************************9.****************88889******************** PP

                 SSSTEEEEEEESSGGGSTHHHHSTTSSEEEETT CS
         AAA  99 keskvivigatnrpdkldpallrgRfdrkieie 131
                  ++  ++++atnrp +ld+a+l +R+ r++ i+
  KHJ32869.1 802 FSG--FIMVATNRPYDLDDAIL-RRLPRRLLID 831
                 866..9999*************.7**9998876 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3   0.3   2.6e-13     2e-10       1      39 [.     854     895 ..     854     903 .. 0.88

  Alignments for each domain:
  == domain 1  score: 40.3 bits;  conditional E-value: 2.6e-13
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgik..e.it 39 
                 +v+l++LAe+T+ ySG Dl++lc +Aal+++r+ ++  + it
  KHJ32869.1 854 SVSLAKLAEATPFYSGSDLKNLCVAAALACVREENEmaTaIT 895
                 69*******************************998542355 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   4.5e-08   3.5e-05      29      95 ..     697     771 ..     691     778 .. 0.72

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 4.5e-08
      RuvB_N  29 reealdhvllyGpPGlGkttlakiiakelgvklkitsgPvlek......agdlaalltnleekd..vlfideihr 95 
                 r++ +  +llyGpPG Gkt lak +ake g+++   ++  l++      ++++ al+t  ++    v+fide+  
  KHJ32869.1 697 RRDRIPGILLYGPPGTGKTLLAKAVAKESGATVLEVTAADLNNmyvgegEKNVKALFTLAKKLSpcVIFIDEVDS 771
                 66777889**********************987665555544312221156777777655544333999999875 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0     1e-06   0.00081      19      56 ..     696     730 ..     690     746 .. 0.78
   2 ?    1.9   0.0      0.34   2.7e+02     125     147 ..     751     772 ..     746     794 .. 0.74
   3 ?   -2.3   0.0       6.6   5.2e+03      68     106 ..     813     846 ..     802     910 .. 0.57

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 1e-06
      AAA_16  19 vrsgrpelvllsGesGvGKsslvrellralekdggifl 56 
                 +r++r + +ll+G++G+GK+ l+++++++  ++   +l
  KHJ32869.1 696 LRRDRIPGILLYGPPGTGKTLLAKAVAKESGAT---VL 730
                 5778889********************854443...44 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.34
      AAA_16 125 rllallsrderplvlvlDdlqwa 147
                 +l+ l+++  +p v+++D+++ +
  KHJ32869.1 751 ALFTLAKK-LSPCVIFIDEVDSI 772
                 55577777.778********943 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 6.6
      AAA_16  68 py...salaqalareellrqlldeaesaeleawrekleeala 106
                 py   +a+++ l r +ll +l  e       ++re++++ l 
  KHJ32869.1 813 PYdldDAILRRLPR-RLLIDLPLE-------RDREAILKILL 846
                 55553446666644.555555555.......33333333333 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.13        99      30      87 ..     624     681 ..     614     690 .. 0.78
   2 !   16.5   0.0   8.5e-06    0.0066       5      76 ..     704     772 ..     702     804 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.13
      AAA_14  30 kesilyinldderdkkladpekllelilek.lkeekktylflDEiqevpewekalkslv 87 
                 + + l  ++ de++k++ +++++++ +l+  +++ +k +  +D i+   e+ +alk l 
  KHJ32869.1 624 ECQALTAQVSDEKKKSKLTYNTYEKKLLSGvVSP-EKICSTFDDIHVPGEIIEALKTLT 681
                 5566677777777777666767778888874455.9***********999999999875 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 8.5e-06
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 +++ G+  +GKT l+k ++ke+      +l+++  d ++    + ek+ ++++ ++k+    ++f+DE+  +
  KHJ32869.1 704 ILLYGPPGTGKTLLAKAVAKESG---ATVLEVTAADLNNMYVGEGEKNVKALFTLAKKLSPCVIFIDEVDSI 772
                 6799*****************99...99****9999999777766667777777766667899******987 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   9.1e-06    0.0071       8      50 ..     704     737 ..     702     741 .. 0.88
   2 ?    3.5   0.0       0.1        80      91     112 ..     754     792 ..     736     812 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 9.1e-06
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpss 50 
                 ++++G++GtGKT+l++ ++++          +++v++vt++ +
  KHJ32869.1 704 ILLYGPPGTGKTLLAKAVAKES---------GATVLEVTAADL 737
                 789*****************98.........899999988776 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.1
      AAA_22  91 v......ielliiDEaqhlr....s.......eealeeL 112
                 +      + ++ iDE++ ++    s        e+++++
  KHJ32869.1 754 TlakklsPCVIFIDEVDSIFgsreSsrqrtshREMINQF 792
                 333344569*********988765145566677777776 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   1.9e-06    0.0015       5     101 ..     703     794 ..     699     800 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 1.9e-06
                 -EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTSEEEEETGGG----.---------HHHHHHHHH CS
       AAA_2   5 silllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEidKihpk.essgadvSregVqrdLLq 101
                  ill gp g+Gkt+laka+a+     +  +++ ad +++    e e+ v+ l   ++         ++++DE+d i  + ess++  S+ +  + +L+
  KHJ32869.1 703 GILLYGPPGTGKTLLAKAVAKESG-ATVLEVTAADLNNMYV-GEGEKNVKALFTLAKKL----SPCVIFIDEVDSIFGSrESSRQRTSHREMINQFLR 794
                 5899********************.7999999999999999.55666677776655544....467**********9998899999998888888875 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       9.8   7.6e+03      34      53 ..     451     470 ..     449     475 .. 0.79
   2 !   17.6   0.0   3.1e-06    0.0024      49     117 ..     703     769 ..     697     783 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 9.8
   IstB_IS21  34 kvkeLatlsfiekkenivll 53 
                 k++++++ ++i+ +e i++ 
  KHJ32869.1 451 KLQKIVNKKWINGREIICVG 470
                 6899999*****99988874 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 3.1e-06
   IstB_IS21  49 nivllGpsGvGKshlaialgveavraglsvlfvrvedLvee.lkrarrdgklaralkrllkvdllilDdl 117
                 +i+l Gp+G+GK+ la a+++e   +g  vl v+++dL +  +   +++ k+  +l++ l + ++ +D++
  KHJ32869.1 703 GILLYGPPGTGKTLLAKAVAKE---SGATVLEVTAADLNNMyVGEGEKNVKALFTLAKKLSPCVIFIDEV 769
                 689***************9886...688999999999866413344455555556667777788888886 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   2.9e-06    0.0022       2      32 ..     704     734 ..     704     812 .. 0.73

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 2.9e-06
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdt 32 
                 +ll G+pG+GK+ la+ ++k+ ga++l+  +
  KHJ32869.1 704 ILLYGPPGTGKTLLAKAVAKESGATVLEVTA 734
                 6789*******************88877655 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.1   5.2e-06    0.0041       2      75 ..     704     770 ..     703     823 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 5.2e-06
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGG CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEve 75 
                 +lL GppGtgK+ la+ +a+  +++v++v       ++dl   +   +++++ v ++l + a+  +++++++DEv+
  KHJ32869.1 704 ILLYGPPGTGKTLLAKAVAKESGATVLEVT------AADLNNMYV--GEGEKNV-KALFTLAKklSPCVIFIDEVD 770
                 89******************9999999874......555665555..2333333.444444444778888888877 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       2.6     2e+03      84     107 ..     176     199 ..     160     212 .. 0.61
   2 ?   -0.3   0.0      0.76   5.9e+02     113     170 ..     419     479 ..     394     485 .. 0.71
   3 !   10.4   0.0    0.0004      0.31      30      60 ..     696     726 ..     689     742 .. 0.85
   4 ?    2.2   0.0      0.13     1e+02     109     140 ..     750     781 ..     727     794 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 2.6
        TniB  84 krlyaaiLealgaplkararvskl 107
                 ++ y++iL++l+a l+ r   ++ 
  KHJ32869.1 176 HNVYTEILATLKAGLSLRPPKNST 199
                 456666666666665555444444 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.76
        TniB 113 rllrelkvrvLiiDEihnllagsarkqreflnalksLgnelkip...ivlvGteealralr 170
                  +  e+k+r Lii   + l+  s +   e+l+ l+++ n+  i    i++vGt+e ++++ 
  KHJ32869.1 419 CCKPEIKTRPLIIQVKDYLELRSLDGGTELLQKLQKIVNKKWINgreIICVGTTEGVETVY 479
                 444567777777776666666677777899999999999988744449******9998875 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 0.0004
        TniB  30 pkrkrmpnlllvGdsnnGKtmivekFarlhp 60 
                  +r+r+p +ll+G++ +GKt +++  a++  
  KHJ32869.1 696 LRRDRIPGILLYGPPGTGKTLLAKAVAKESG 726
                 5799******************999887765 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.13
        TniB 109 qqvlrllrelkvrvLiiDEihnllagsarkqr 140
                 ++  +l ++l++ v+ iDE++++   + ++++
  KHJ32869.1 750 KALFTLAKKLSPCVIFIDEVDSIFGSRESSRQ 781
                 55667889999************955444443 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.7e-05     0.014       1      37 [.     704     741 ..     704     796 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.7e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.gvnlrdvakengl 37 
                 Ill G+pG+GKt lak+++k+ g  + +++    +n++
  KHJ32869.1 704 ILLYGPPGTGKTLLAKAVAKESGAtVLEVTAADLNNMY 741
                 99*****************9974434444444444444 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   2.4e-05     0.019      43      89 ..     696     741 ..     688     758 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.4e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXX CS
       TIP49  43 ikekklaGravLlaGpsgtGktalaiaiskelgedv.pfvalsgsevy 89 
                 ++ +++   ++Ll Gp+gtGkt la a++ke g+ v   +a    ++y
  KHJ32869.1 696 LRRDRIP--GILLYGPPGTGKTLLAKAVAKESGATVlEVTAADLNNMY 741
                 5666666..7*********************99665133444444555 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       3.4   2.7e+03      33      71 ..     255     292 ..     217     310 .. 0.68
   2 !   13.2   0.0   0.00011     0.086       1      26 [.     704     729 ..     704     768 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 3.4
  RNA_helicase  33 svysrnpeddfwdgYtgqevv.vidDfgqvkdeenpsdla 71 
                   ++ + n++++ ++gY+ q+v    +D+   +++  ++dl+
    KHJ32869.1 255 NI-AWNNTTTSLYGYNAQKVAgKLEDLDDYRSS-GDQDLE 292
                   34.447777889999988886345666555544.344444 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 0.00011
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   i+lyGp+g+GK++lak +ak+   ++
    KHJ32869.1 704 ILLYGPPGTGKTLLAKAVAKESGATV 729
                   789**************999877665 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   3.1e-05     0.024       5      77 ..     704     772 ..     702     808 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.1e-05
      AAA_24   5 iliyGpsgiGKTtlakel....gpkplfidtekGlksldadkfpdieswedfldevvelaaeladyktlviDtidel 77 
                 il+yGp+g+GKT lak      g ++l +     l+++++ +++      + ++++ +la++l+++ +++iD +d +
  KHJ32869.1 704 ILLYGPPGTGKTLLAKAVakesGATVLEVTAA-DLNNMYVGEGE------KNVKALFTLAKKLSPC-VIFIDEVDSI 772
                 89**************9977544444444333.36667776665......3344444456666655.6777777765 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   6.3e-05     0.049      25      43 ..     704     722 ..     702     749 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.3e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +ll+GppG+GKt+lak+++
    KHJ32869.1 704 ILLYGPPGTGKTLLAKAVA 722
                   79*************9875 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.2      0.11        85      35     169 ..     323     475 ..     322     492 .. 0.59
   2 ?    7.4   0.0    0.0046       3.6      14      44 ..     695     725 ..     693     741 .. 0.84
   3 ?   -0.3   0.0       1.1   8.4e+02     112     136 ..     754     776 ..     741     797 .. 0.72

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.11
    ATPase_2  35 aLlkeiienledkdkyviyyialreesiskldefieeeeekkklekal.......................giavpkaeleeilkeksklvfkaielll 110
                 +Ll+ ++++ +  +k   +  + +++++ ++d++     ++++ ++ +                       + a +   l e ++ +s++  + ++++ 
  KHJ32869.1 323 KLLNVFVQKPRGNSKSTSWSQDESNQNNRNFDST-----SSDRSKENIgqnpwddlkttailraivesadsKRAAEIEGLGEDFS-TSNEKISELTDMQ 415
                 6777777777777777777777777777777777.....3333333333555566666777777766544422222222223333.2222233333333 PP

    ATPase_2 111 eki....kkkgkk..iiiiiDelqklidlglngaellvkeLlnliesltkekhlcvviclsSegl 169
                 + +    + k     +ii + +  +l+   l+g ++l+++L++++ ++  + + ++++ ++ eg+
  KHJ32869.1 416 NVVcckpEIK--TrpLIIQVKDYLELR--SLDGGTELLQKLQKIVNKKWINGREIICV-GTTEGV 475
                 3331100223..2347888999999**..99***************988888877665.455554 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0046
    ATPase_2  14 ilerepneiyfiYGpegsGKtaLlkeiienl 44 
                 il+r++ + +++YGp g GKt L k +++++
  KHJ32869.1 695 ILRRDRIPGILLYGPPGTGKTLLAKAVAKES 725
                 56666677789*************9998875 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 1.1
    ATPase_2 112 kikkkgkkiiiiiDelqklidlgln 136
                  + kk    +i+iDe+  +   g++
  KHJ32869.1 754 TLAKKLSPCVIFIDEVDSIF--GSR 776
                 45555566899999999887..555 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.1    0.0025       1.9      36      52 ..     704     720 ..     685     725 .. 0.87
   2 ?    2.4   0.0      0.12        97     132     184 ..     751     808 ..     731     811 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0025
      AAA_25  36 allaGapgtGKttlald 52 
                 +ll+G+pgtGKt la  
  KHJ32869.1 704 ILLYGPPGTGKTLLAKA 720
                 69***********9965 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.12
      AAA_25 132 aleaaieevegvrlvviDplsralgg.....densnsdv.galvealeriarrtgaavl 184
                 al   +++   + ++ iD +++++g      + +s++++ ++++  ++ i++  g + +
  KHJ32869.1 751 ALFTLAKK-LSPCVIFIDEVDSIFGSressrQRTSHREMiNQFLREWDGISDFSGFIMV 808
                 55566666.35889***********9544444444455679999999988887776655 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0    0.0012      0.93      22      40 ..     704     722 ..     688     744 .. 0.78
   2 ?    0.6   0.0      0.38   2.9e+02     109     153 ..     750     795 ..     731     800 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0012
      ATPase  22 vlitGepGtGKtifalqFl 40 
                 +l++G pGtGKt++a+  +
  KHJ32869.1 704 ILLYGPPGTGKTLLAKAVA 722
                 89************98655 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.38
      ATPase 109 eelaeaikeikakrvviDsitglayeekeavaReilrqlvrvl.kk 153
                 + l +  k++    + iD ++++  + +++  R+  r++++++ ++
  KHJ32869.1 750 KALFTLAKKLSPCVIFIDEVDSIFGSRESSRQRTSHREMINQFlRE 795
                 4556677888888899999999988888888888888888765455 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   0.00018      0.14       2      29 ..     704     731 ..     703     757 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00018
      AAA_28   2 ivitGgestGKTtlleaLaar.gypvvpE 29 
                 i + G+++tGKT l++a a++ g + v E
  KHJ32869.1 704 ILLYGPPGTGKTLLAKAVAKEsGAT-VLE 731
                 7899***************984544.444 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0         6   4.7e+03      61      92 ..     304     335 ..     297     336 .. 0.84
   2 ?   -2.2   0.0       3.2   2.5e+03     140     162 ..     405     427 ..     400     430 .. 0.79
   3 ?    9.3   0.0   0.00095      0.74      36      60 ..     704     728 ..     682     773 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 6
       AAA_7  61 kylsltinfsaqtsanqlqdiiesklekrrkg 92 
                 + ++ +i fs + + +++ ++++  ++k r++
  KHJ32869.1 304 SSVVSSIGFSTSYTGEDFSKLLNVFVQKPRGN 335
                 56778999**************9999998875 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3.2
       AAA_7 140 klefkeikdvqlvaamgppgggr 162
                 + ++ e++d+q v +++p+ ++r
  KHJ32869.1 405 NEKISELTDMQNVVCCKPEIKTR 427
                 557889***********987665 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00095
       AAA_7  36 vllvGptGtGKtviikdllkkldke 60 
                 +ll+Gp GtGKt+++k + k+   +
  KHJ32869.1 704 ILLYGPPGTGKTLLAKAVAKESGAT 728
                 89**************998887633 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00054      0.42     117     138 ..     704     725 ..     699     739 .. 0.91
   2 ?   -1.4   0.0       1.3   9.9e+02     128     172 ..     888     929 ..     887     930 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00054
   Parvo_NS1 117 vwfyGpantGktnlaeaIakav 138
                 +++yGp+ tGkt la+a ak +
  KHJ32869.1 704 ILLYGPPGTGKTLLAKAVAKES 725
                 799***************9865 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.3
   Parvo_NS1 128 tnlaeaIakavplygcv.nwtNenfpfndcfkklliwweeglmyvs 172
                 + +a aI+  ++   ++ +  Nen      +k+++++ ++g m ++
  KHJ32869.1 888 NEMATAITASSKASQHLsAQINENK----SGKRIIGYIDDGIMEEK 929
                 5789999999999999977777776....89999999999999876 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00027      0.21      21      49 ..     701     733 ..     673     745 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00027
                 E..EEEEESTTSSHHHHHHHHHHHTT--..--- CS
        TsaE  21 v..ilLeGdLGaGKTtlvrglakalgve..evk 49 
                 +  ilL+G+ G+GKT l++++ak+ g +  ev+
  KHJ32869.1 701 IpgILLYGPPGTGKTLLAKAVAKESGATvlEVT 733
                 1559*******************9998766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1021 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1026  (0.0572257); expected 358.6 (0.02)
Passed bias filter:                      564  (0.0314574); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 0.89u 0.30s 00:00:01.19 Elapsed: 00:00:00.47
# Mc/sec: 6489.33
//
Query:       KHJ32870.1  [L=2032]
Description: putative mus7 mms22 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-87  294.5  19.1      2e-87  294.5  19.1    2.5  3  Mus7      Mus7/MMS22 family


Domain annotation for each model (and alignments):
>> Mus7  Mus7/MMS22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   1.1     0.026   4.6e+02     287     342 ..     892     941 ..     889     980 .. 0.76
   2 !  294.5  19.1   1.1e-91     2e-87       1     614 []    1075    1698 ..    1075    1698 .. 0.81
   3 ?   -3.6   0.5       0.2   3.6e+03     499     539 ..    1880    1915 ..    1875    1945 .. 0.47

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.026
        Mus7 287 laeknkrtveslLkvalrslqdviqtsktleaanlllskaqlkqilellksleprv 342
                 l + ++  +++l  + l+ +q+ i   +tl+++n ll      q+l+ + s   r+
  KHJ32870.1 892 LPNSSTTSAKDLILFVLNYIQQNISYHTTLDQHNFLLRM---TQVLQEFSS---RI 941
                 56777888999999***********************94...333333333...33 PP

  == domain 2  score: 294.5 bits;  conditional E-value: 1.1e-91
        Mus7    1 sEslWqklftllplsevdangitqagar...lkenWslvkrllsrvlersdenkemaasrnrYvrillqrcyfLvsewgWrdaekilltlydfFksr 94  
                  +E+lW+++ +llpl+e d +g +++g r   + enW l+  l++rvl  + +n +++ s+n+Yvr l+ rc++L+ ewgW +  ++++ ++dfF+s+
  KHJ32870.1 1075 MEKLWYSMYSLLPLFEFDDLGRVVSGQRhvvSFENWLLPTYLIKRVLRFYSSNPRQSSSFNEYVRCLIIRCHYLMIEWGWWKSFTLIGSVFDFFASQ 1171
                  79****************************99***************************************************************** PP

        Mus7   95 kladLeeEeeykspafleeLdrapsldieaeddcFhiFlklLalaiqeLreleskkkikrlvsRllPvhkrqytkedpitqsdlaaLrNhhdLlllL 191 
                  +l++L++Ee+y sp+fle+Ld++  ld+e+ed cFhiFlk+ al   +Lr+ +++k+i++l  RllP+h+rqy+ke+ i+q+dla+LrNhhdLl++L
  KHJ32870.1 1172 NLSHLRNEEVYHSPSFLEKLDTESPLDVEPEDCCFHIFLKIVALEFFHLRKIGDTKNIRNLCARLLPNHDRQYPKEQNIHQRDLASLRNHHDLLCTL 1268
                  ************************************************************************************************* PP

        Mus7  192 lwavptslrprleeikslvapkdshkeaclisirawgqlarvkistkedrsllepvvkwfnnvisellkeyelaeseieaaiemwksfshal..... 283 
                  +w  p + rp+ + i+ lv  + sh+eac+i++++w  l+r+ ++   +++l +p+ +w + ++  + ++++ ae+e+++ +e   + s++l     
  KHJ32870.1 1269 FWSMPHDQRPSTNLIQGLVIADRSHREACMINLQSWENLTRFLVKSTVNSNLYQPFKNWQSAFFGGVYEQFLGAEEEVRQVAEETHQKSENLmtdgr 1365
                  *******************************************************************************555544444444411111 PP

        Mus7  284 aeqlaeknkrtveslLkvalrslqdviqtsktleaanlllskaqlkqilellksleprvn.qealkviqtfl........lqpaltteeqqqkqedd 371 
                    ++ + nk+++  +L   ++++ ++i+t +  +  + +l+   l + l+l    e +++  + +++iq ++        l p +++e   ++  ++
  KHJ32870.1 1366 IYEILTINKKNIVGILCRCVKAMGNIINTINSDSMLKEVLNIDVLSKALNLNLHKENQFSdLILTEIIQVLMhsmdqtekLYPMISNESVHSNFVNE 1462
                  4466777888888898889999999995555444444455555666667666677777776444445555555447777755666666666666666 PP

        Mus7  372 darDeeslddiallleeedtkefvelvrsllspalkqllsnilgedrctEkavleavvdcwakiaqvLvknglrevwssqyskfgleswkrirnttk 468 
                  d++D+ + ++   l    + +    ++r ++++ l+ l s++lg+        +  +vdcwa++++ +++n+ ++ ++++++   +   k  ++  +
  KHJ32870.1 1463 DSQDSIDINNWSRLEMISLLETLLNFIRPVIKLRLSGLSSKLLGDST------NIRLVDCWARLISLITENEDKK-FQYNLILEANSVFKNRKSNCS 1552
                  666666666666666666777899999*********99999999765......56789********999998776.777333333333344444556 PP

        Mus7  469 rrkflllFlakll....ekdaaavqeieeevlsvwlqslvkrvsslkdehsltevlkkvkrkdptLknlpflaket....isislatgenqrlslls 557 
                     + +lF+akll    ++d+++++     +   wl sl+ ++++   + slt  l +   k+  L + p + k +    i + + +++n   +  +
  KHJ32870.1 1553 INHYWPLFIAKLLyyrkSLDEFKFS--GFDIGLEWLLSLADFEDASMPKISLTFQLHQ---KKHYLCKVPDSHKLDrgqlIHAAIREMSNLLNENST 1644
                  77889********333334555554..4567779*****9999983344477766666...554554455554444555666666666666666666 PP

        Mus7  558 dalanlrrslsldkdeftellqallrsmksvyekllaskttshgtyvdfvsrlvsfi 614 
                  +a   +    ++ k+ f++ l ++++ m++ +e+l  ++ + h+ y +f++ ++  i
  KHJ32870.1 1645 EATIGIE--KRQAKRYFSDILGEVMNFMQQILESLDPNS-DRHRIYLNFARSVITNI 1698
                  6666666..999************************999.*************9866 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 0.2
        Mus7  499 wlqslvkrvsslkdehsltevlkkvkrkdptLknlpflake 539 
                  w+q +   +++ ++  ++t++  +++++ ++L    f+ k+
  KHJ32870.1 1880 WMQNA---STMRQYMERYTQMTETINQVTNLLS--SFIYKA 1915
                  55555...2222233344444444444444442..333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2032 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       995  (0.0554967); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.03u 0.32s 00:00:01.35 Elapsed: 00:00:00.48
# Mc/sec: 12816.40
//
Query:       KHJ32871.1  [L=90]
Description: putative csep0310 effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.29   11.3   0.5        0.4   10.8   0.5    1.2  1  YbgT_YccB  Membrane bound YbgT-like protein


Domain annotation for each model (and alignments):
>> YbgT_YccB  Membrane bound YbgT-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.5   2.2e-05       0.4       8      23 ..       7      22 ..       6      23 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 2.2e-05
   YbgT_YccB  8 LGvlLAvlfgilnalw 23
                + vl A ++gi+n++w
  KHJ32871.1  7 IPVLIASSIGIINGIW 22
                5699************ PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1023  (0.0570584); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 652.00
//
Query:       KHJ32872.1  [L=88]
Description: hypothetical protein EV44_g3394 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 654.33
//
Query:       KHJ32873.1  [L=103]
Description: putative ssdna binding protein ssb3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-19   69.6   0.0    2.6e-19   69.5   0.0    1.0  1  Rep_fac-A_3  Replication factor A protein 3
  ------ inclusion threshold ------
      0.033   14.0   0.0       0.05   13.4   0.0    1.3  1  Gar1         Gar1/Naf1 RNA binding region


Domain annotation for each model (and alignments):
>> Rep_fac-A_3  Replication factor A protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.5   0.0   2.9e-23   2.6e-19       4      89 ..       4      88 ..       1      97 [. 0.94

  Alignments for each domain:
  == domain 1  score: 69.5 bits;  conditional E-value: 2.9e-23
                 -..-EEE-GGGGGGGTTSEEEEEEEEEEETTSSEEEEE-TTS-EEEEEESS--SS---SEEEEEEEE-TTS-EEEEEEEE------HH CS
  Rep_fac-A_3  4 e..tprvnpsmLsqfvgrtvrivgkvesvpsgktlilqstdggsvtvrlsedstleiskwvEvvGkvsddlgirldsvvefgedlDld 89
                    tpr+++s+L +f++rtvr++g+v ++ +g+t+i++s+  g+vt++l++d +l ++++ Ev+Gk ++dl+ir+++ +++g+d+ ++
   KHJ32873.1  4 LiyTPRITSSHLDSFTNRTVRLLGRVMQL-RGDTAIVDSD--GNVTLHLNRDAHLIVGNVFEVIGKINQDLSIRVLKSTNMGKDCKIK 88
                 4459*************************.**********..****************************************999776 PP

>> Gar1  Gar1/Naf1 RNA binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   5.5e-06      0.05      10      74 ..      13      70 ..       6      91 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 5.5e-06
                TT----TTS-EEEEEEEEEEETTEEEEEE---S--B--BTT-EEEETT--EEEE--EEES-SSS- CS
        Gar1 10 edieigppeevleiGtvssivenevviksttsgekkvldfnsilflenktqiGkVdEifGpvnep 74
                +  ++ ++ +v  +G v++   ++ ++ s+ +  +  l+ +       +  +G+V+E++G++n+ 
  KHJ32873.1 13 SHLDSFTNRTVRLLGRVMQLRGDTAIVDSDGN-VTLHLNRD------AHLIVGNVFEVIGKINQD 70
                55666678899999999999999999999933.22334444......45589**********985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 795.24
//
Query:       KHJ32874.1  [L=165]
Description: putative glycine cleavage system h protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-32  112.2   0.6    1.6e-32  112.0   0.6    1.0  1  GCV_H     Glycine cleavage H-protein


Domain annotation for each model (and alignments):
>> GCV_H  Glycine cleavage H-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.0   0.6   8.7e-37   1.6e-32       2     121 ..      36     162 ..      35     163 .. 0.92

  Alignments for each domain:
  == domain 1  score: 112.0 bits;  conditional E-value: 8.7e-37
                 EE-TTSEEEEEETT..EEEEEE-HHHHHHH-SEEEEE---TT-EE-TT-EEEEEEESS-EEEEE-SSSEEEEEE-GGGTT-TTHHHH-TTTT....T-- CS
       GCV_H   2 yytkehewvkveedg.vatvGitdfaqeelgdvvfvelpevgtkvkkgeslaavEsvKaasevyapvsGevvevNekleeepeliNkdpyee....gWl 95 
                 +ytk+hew++  edg +  +Gi+++a ++lg+vv+velpev  +v +g+s++avEsvK+as++ +pv+ +++ vN+ lee p+ iN+ p ee    gW+
  KHJ32874.1  36 KYTKDHEWINLSEDGkTGLIGISKYASDALGEVVYVELPEVPMSVTAGDSIGAVESVKSASDINSPVTCTITSVNKLLEERPKTINEGPEEEssagGWV 134
                 8********9888763789*********************************************************************997544448** PP

                 EEEEE..S-GGGGGGSEEHHHHHHHHHH CS
       GCV_H  96 iklkl..snleeleeLlsaeeyekllke 121
                 +k+++  s l++l++L++ +ey++++++
  KHJ32874.1 135 AKVEIgeSGLQDLQDLMDPQEYKEFTEK 162
                 *****8777899999*********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1218.60
//
Query:       KHJ32875.1  [L=308]
Description: putative gtp binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.8e-31  107.3   0.1    7.7e-31  106.9   0.1    1.2  1  Ras        Ras family
    8.4e-24   84.1   0.1    1.4e-23   83.4   0.1    1.4  1  Roc        Ras of Complex, Roc, domain of DAPkinase
    1.4e-06   27.9   0.2    2.1e-06   27.3   0.2    1.2  1  Arf        ADP-ribosylation factor family
    1.9e-05   23.7   0.1      0.064   12.1   0.1    2.2  2  DLIC       Dynein light intermediate chain (DLIC)
    0.00016   21.1   0.2    0.00022   20.6   0.2    1.2  1  Gtr1_RagA  Gtr1/RagA G protein conserved region
  ------ inclusion threshold ------
        0.1   11.8   2.8        1.1    8.4   2.8    2.4  1  G-alpha    G-protein alpha subunit


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.9   0.1   2.6e-34   7.7e-31       1     160 [.     121     284 ..     121     286 .. 0.93

  Alignments for each domain:
  == domain 1  score: 106.9 bits;  conditional E-value: 2.6e-34
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 K+ +vGd ++GKtsl++++v+++++e+y++T+gv+f++k+i+++++e++++iwD  Gq ef ++ +l+ +da +il ++d+t++++++++k+w+++ + 
  KHJ32875.1 121 KVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTINIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRG 219
                 6779********************************************************************************************999 PP

                 HSTTTSEEEEEEETTTGGG......G-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras 100 vaeenvpivLvGnKvDlee......kravsteegeelakelglkfletSAktnenveeafeellrei 160
                   ++     LvG+K D         ++++s + ++++ak + +  +  S  ++ nv+++f+ +l+++
  KHJ32875.1 220 FNKT-AIPFLVGTKYDHFVnfpredQEEISIQ-ARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKA 284
                 9996.67789******8666777779999986.688************************9988765 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.4   0.1   4.8e-27   1.4e-23       1     119 [.     121     234 ..     121     235 .. 0.91

  Alignments for each domain:
  == domain 1  score: 83.4 bits;  conditional E-value: 4.8e-27
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 Kv +vGd+++GKtsl+ ++ve++ +e++ +t+gv+f++k++ +i++       ++++++iWD++Gq +f ++ pl +++a ++++++d   +++ +++k
  KHJ32875.1 121 KVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTI-NIRN-------TEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDltrKSTLNSIK 211
                 899***********************************997.5554.......479********************************7433344789* PP

                 HHHHHHHHHCSSS-EEEEEE-TT CS
         Roc  97 eWlkelkkvagkspvilvgnkiD 119
                 eW+++ +  +++++ +lvg+k+D
  KHJ32875.1 212 EWYRQGRGFNKTAIPFLVGTKYD 234
                 *********************99 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.2   6.9e-10   2.1e-06      14     101 ..     119     211 ..     107     237 .. 0.83

  Alignments for each domain:
  == domain 1  score: 27.3 bits;  conditional E-value: 6.9e-10
                 EEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEEE..EEEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHH CS
         Arf  14 elrilllGLDnaGKtTilkklkleelvt.tvPTigfnv..eelei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeak 101
                  +++ ++G  + GKt ++ k+ +++ ++  + T+g n   ++++i   +++f++wD+GGq++  ++     ++  a++f+ D + ++ l++ k
  KHJ32875.1 119 VIKVGMVGDAQIGKTSLMVKYVEGSWDEdYIQTLGVNFmeKTINIrnTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIK 211
                 467889999999************998768899998862256666335689***********9999999999999999999999888887766 PP

>> DLIC  Dynein light intermediate chain (DLIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.1   2.1e-05     0.064      15     124 ..     109     214 ..     105     224 .. 0.83
   2 !    9.5   0.0   0.00013      0.39     225     271 ..     247     293 ..     228     298 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.1e-05
        DLIC  15 strsssklPsgksvlvlGedgsGkttliak.lqGveeekkGrGleylyldvkdedrddltrlnvwildGdlyhkgllkfaleaeslkdtlvilvvdlsr 112
                 +t+s++k     +v ++G+   Gkt+l+ k + G  +e   + l   +++   + r+     ++w l G     ++l    +        ++++ dl+r
  KHJ32875.1 109 QTQSRTKNSVVIKVGMVGDAQIGKTSLMVKyVEGSWDEDYIQTLGVNFMEKTINIRNTEITFSIWDLGGQREFVNMLPLVCNDA----VAILFMFDLTR 203
                 8***************************9956898777666777777778888888899999*********9999999877653....45888889998 PP

        DLIC 113 Pwtileslqkwa 124
                   ++l+s+++w 
  KHJ32875.1 204 K-STLNSIKEWY 214
                 6.5688888886 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00013
        DLIC 225 iqshirrfclqyGaallytsvkedknldllykylvhkiyglpfrtPa 271
                 i    rrf   + a+l+++s     n+  ++k +  k ++l+ ++P 
  KHJ32875.1 247 ISIQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPE 293
                 55667*************************************99995 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.2   7.5e-08   0.00022       3     131 ..     123     243 ..     121     286 .. 0.69

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 7.5e-08
   Gtr1_RagA   3 LLmGksgsGKts.mrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletlke 100
                  ++G  + GKts m + +        +++lg+    +  ++r + ++t+++wD+gGq++fv+         + ++  +++++fD +    +++l+++ke
  KHJ32875.1 123 GMVGDAQIGKTSlMVKYVEGSWDEDYIQTLGVNFMEKTINIR-NTEITFSIWDLGGQREFVNML-----PLVCNDAVAILFMFDLT---RKSTLNSIKE 212
                 578999999999344555555555556778888888888886.7789**************986.....667888889*******9...5666777777 PP

   Gtr1_RagA 101 ilealrqyspeakvfvlihKmDliqederee 131
                   ++ r +++ a  f    K D   +  re+
  KHJ32875.1 213 WYRQGRGFNKTAIPFLVGTKYDHFVNFPRED 243
                 7777777777777777777777765444443 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   2.8   0.00036       1.1     181     235 ..     148     201 ..       4     203 .. 0.67

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00036
                 HHCS-----SEEEEEEEC...T-TEEEEEEEE-SSHHHHHGTCCCTTTECEEEEEEEG CS
     G-alpha 181 ilkarlktvGisetkfev...dsklefrivdvgGqrserkkWvpffddvdaiiFlvsl 235
                      ++t+G++ ++  +   +++++f i+d+gGqr+  +    + +d+ ai+F+  l
  KHJ32875.1 148 Y----IQTLGVNFMEKTInirNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDL 201
                 4....455566655555555977999**********6644444455999999999766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       711  (0.0396564); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 2319.79
//
Query:       KHJ32876.1  [L=345]
Description: putative porphobilinogen deaminase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-76  256.8   0.0    1.7e-76  256.3   0.0    1.2  1  Porphobil_deam   Porphobilinogen deaminase, dipyromethane cof
    1.9e-20   73.0   0.1    4.7e-20   71.7   0.1    1.6  1  Porphobil_deamC  Porphobilinogen deaminase, C-terminal domain


Domain annotation for each model (and alignments):
>> Porphobil_deam  Porphobilinogen deaminase, dipyromethane cofactor binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  256.3   0.0   1.9e-80   1.7e-76       1     203 [.      24     239 ..      24     240 .. 0.92

  Alignments for each domain:
  == domain 1  score: 256.3 bits;  conditional E-value: 1.9e-80
  Porphobil_deam   1 irigtRkSkLAlaqaelvaeaLke...eeeveivtiktkGDkildkpLakiggkglFtkeleeaLlegeidlaVhSlKDlptelpeglelaavlk 92 
                     i++gtR+S+LA++qa++v +aL++   + e+ei+ + t GDk++ ++L+kig+k+l+t+ele++L +g++d++Vh+lKDlpt+lpe+l+++++++
      KHJ32876.1  24 INVGTRNSALAMIQAKTVHNALQKaypQLEFEIHGMATIGDKDQVTALSKIGAKSLWTSELEDELNKGNLDMIVHCLKDLPTSLPENLKIGCIMQ 118
                     78********************766667779**************************************************************** PP

  Porphobil_deam  93 redprDvlvvks.....sleelpegavvgTsSlRRkaqlkklrpdlevkdlRGnvdtRlrkldeg..eydaiiLAaAGLkRlgleerisevlspe 180
                     redprDvl++++     sl+elp+gavvgTsSlRR+aq+k+ +p+le+kd+RGn+ tRl+kld++  +y+++iLAaAG+kR+g+e+ri+++l+++
      KHJ32876.1 119 REDPRDVLIMRKdsnysSLSELPRGAVVGTSSLRRSAQVKRFFPHLEIKDVRGNIGTRLNKLDADdgKYSCLILAAAGIKRMGWENRITSYLDSK 213
                     **********44456679********************************************655348********************9999875 PP

  Porphobil_deam 181 e...llpavgQGalavevrkedeell 203
                          ++avgQGala+e+ +++++++
      KHJ32876.1 214 AeniHYYAVGQGALAIEILEGNDRIQ 239
                     4444668***********99988775 PP

>> Porphobil_deamC  Porphobilinogen deaminase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.7   0.1   5.3e-24   4.7e-20       2      73 ..     252     324 ..     251     325 .. 0.92

  Alignments for each domain:
  == domain 1  score: 71.7 bits;  conditional E-value: 5.3e-24
                      HHHHHHHHHHHHTT--TTSSEEEEEEEETTE.EEEEEEEE-TTS..S-EEEEEEEE.-GGGHHHHHHHHHHHH CS
  Porphobil_deamC   2 levlaERallkeLeGGCsvPiGvyaeveaneelkLkglvlsldglksaveeaeakg.eleeaeelGkklaeel 73 
                      l+ +aER+l+++LeGGCsvPiGv ++  ++++l++k+lv+sldg ks++ e++++  +l++ae+ G k+a el
       KHJ32876.1 252 LATTAERSLMRTLEGGCSVPIGVESTWIEKDKLTIKALVISLDGAKSVEVEKTSQVlNLNDAEDFGEKVAREL 324
                      6789**********************996667************9988888888889*************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2580.93
//
Query:       KHJ32877.1  [L=470]
Description: hypothetical protein EV44_g5592 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00089   18.2   0.8     0.0015   17.5   0.8    1.3  1  CALCOCO1    Calcium binding and coiled-coil domain (CALCOCO1)
    0.00094   19.3   1.6     0.0021   18.1   1.6    1.5  1  TPR_MLP1_2  TPR/MLP1/MLP2-like protein


Domain annotation for each model (and alignments):
>> CALCOCO1  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.8   1.7e-07    0.0015      35      94 ..      81     140 ..      66     157 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.7e-07
    CALCOCO1  35 rLeeclreraeLlqaqeaanrqrekekeeykrdreeldrerkelesrveelkeelkesre 94 
                   ++ + era+L   ++  ++  e e+e ++r+r+ +++erk l+ r+ +l+ +l ++ +
  KHJ32877.1  81 LRNQFQGERAHLRADRDRMQEVIEGERELWERERQIWNKERKALRTRITDLEIKLLSVSD 140
                 45566789********************************************99877665 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   1.6   2.4e-07    0.0021      67     116 ..      83     132 ..      76     134 .. 0.94

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 2.4e-07
  TPR_MLP1_2  67 nelkaeiaelkaeaesakaeleeseesweeqkeelekelselekriedln 116
                 n+ + e+a l+a++++ ++ +e ++e we++++   ke + l++ri+dl+
  KHJ32877.1  83 NQFQGERAHLRADRDRMQEVIEGERELWERERQIWNKERKALRTRITDLE 132
                 78899*******************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 3634.00
//
Query:       KHJ32878.1  [L=310]
Description: hypothetical protein EV44_g0572 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.012   15.7   1.2        6.6    6.9   0.2    2.6  2  Sox17_18_mid  Sox 17/18 central domain
       0.14   12.5   1.4        3.4    8.0   0.1    2.8  2  NRIP1_repr_3  Nuclear receptor-interacting protein 1 repressi


Domain annotation for each model (and alignments):
>> Sox17_18_mid  Sox 17/18 central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.1   0.00076       6.8      13      21 ..     209     217 ..     200     218 .. 0.75
   2 ?    6.9   0.2   0.00073       6.6       9      21 ..     294     306 ..     288     307 .. 0.71

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.00076
  Sox17_18_mid  13 DpYgLPTPE 21 
                    +Y+LPTPE
    KHJ32878.1 209 KSYPLPTPE 217
                   59******9 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.00073
  Sox17_18_mid   9 sasfDpYgLPTPE 21 
                   s s  +Y LPTPE
    KHJ32878.1 294 SNSRVSYKLPTPE 306
                   434449******9 PP

>> NRIP1_repr_3  Nuclear receptor-interacting protein 1 repression 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.2     0.024   2.1e+02       5      64 ..      49     101 ..      46     108 .. 0.63
   2 ?    8.0   0.1   0.00038       3.4      59      78 ..     186     205 ..     153     211 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.024
  NRIP1_repr_3   5 sEPsedlha.qnsnvqlskeaksakflgvaaslqrsiaasPasedlkseplspqdfsfsKn 64 
                   + Ps+ + + +++n+++ +e +++k+ +++   + s +  P+s+     ++ pq+ s+ K+
    KHJ32878.1  49 TSPSDSSIIiYSKNSHQ-REIQHEKYGEIT--FDNSLDQRPVSD-----STLPQNLSLCKS 101
                   56777666645555554.667777777665..445556666665.....566777777765 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00038
  NRIP1_repr_3  59 fsfsKnGLLsRLLRqnqdsy 78 
                    sfsK+GL  RLL  + ++ 
    KHJ32878.1 186 RSFSKDGLKRRLLNNKENNN 205
                   59***********8777664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 2238.72
//
Query:       KHJ32879.1  [L=906]
Description: hypothetical protein EV44_g5024 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (906 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2709  (0.151096); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                       159  (0.00886831); expected 17.9 (0.001)
Passed Fwd filter:                        39  (0.00217525); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.54u 0.35s 00:00:01.89 Elapsed: 00:00:00.58
# Mc/sec: 4688.92
//
Query:       KHJ32880.1  [L=344]
Description: hypothetical protein EV44_g5751 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.013   15.6   0.3      0.023   14.8   0.3    1.5  1  MCU       Mitochondrial calcium uniporter
      0.084   11.9   0.3       0.17   10.9   0.0    1.6  2  7tm_6     7tm Odorant receptor
       0.21   11.6   0.5       0.59   10.1   0.5    1.7  1  DUF5345   Family of unknown function (DUF5345)


Domain annotation for each model (and alignments):
>> MCU  Mitochondrial calcium uniporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.3   3.8e-06     0.023       9     113 ..     172     279 ..     122     281 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 3.8e-06
                 XXXXXXXXXXXXXX.XXXX...XXXXXXXXXXXXXXXXX-SSSSSSTSSSSSHHHHHHHHHHHHH-SHHHHHHHHTCCCGGGCHHHHGGGHHHHHHHHT CS
         MCU   9 avlsesgvvialst.llee...eeakvllrvkqlvkalesalnveeeqlkkereleekleelreelepleekkeeidekAerrtrrllwagLallavql 103
                 a++ + +v+++++   + +   +++ +++++++ + +++++ +  +  +++   l ++ +++++++e+le ++++ ++  ++r r + w+ L+ + + +
  KHJ32880.1 172 AITRQLNVRLLSEChKVAHesnKQLDSFESFQNQATRIKELKSRVDIGRQNFLGLIDRVRHVQKRVESLEMNERKWRNTTRKRLR-IFWSCLIGILTLT 269
                 445555555555554222222233444444444444444444555555777778999**************88888887777766.6677777788889 PP

                 HHHHHHHTTT CS
         MCU 104 gilarLTwwe 113
                  ++  L ww+
  KHJ32880.1 270 LLFYLLSWWV 279
                 9999*****6 PP

>> 7tm_6  7tm Odorant receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1      0.42   2.5e+03      27      60 ..     162     195 ..     149     204 .. 0.70
   2 ?   10.9   0.0   2.9e-05      0.17      29      93 ..     220     283 ..     217     302 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.42
       7tm_6  27 vnrkefyelinllrqldtrplaeeeeriheiala 60 
                      ++el  + rql+ r l+e +++ he +++
  KHJ32880.1 162 STIVSLKELAAITRQLNVRLLSECHKVAHESNKQ 195
                 4455677788888888888888888888888777 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 2.9e-05
       7tm_6  29 rkefyelinllrqldtrplaeeeeriheialaekrrkfllvilfilasalalililvkmvldhet 93 
                 r++f  li+++r++ +r+ + e  ++++++ + kr++  ++ + i + +l l++ l++ ++ ++ 
  KHJ32880.1 220 RQNFLGLIDRVRHVQKRVESLEMNERKWRNTTRKRLR-IFWSCLIGILTLTLLFYLLSWWVTEHA 283
                 899**************************99977777.889999999999999999998888776 PP

>> DUF5345  Family of unknown function (DUF5345)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.5   9.9e-05      0.59      27      65 ..     241     279 ..     233     280 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 9.9e-05
     DUF5345  27 aeekerkrkrlrrElllFlliAllilsllllalvqapal 65 
                 + +++++r   r+ l++F+++ + il+l+ll ++ ++++
  KHJ32880.1 241 EMNERKWRNTTRKRLRIFWSCLIGILTLTLLFYLLSWWV 279
                 5678999*************************9999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       972  (0.0542138); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 2659.00
//
Query:       KHJ32881.1  [L=141]
Description: hypothetical protein EV44_g2218 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       296  (0.0165096); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1071.02
//
Query:       KHJ32882.1  [L=623]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0011   18.8   0.0     0.0042   16.9   0.0    1.9  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase
  ------ inclusion threshold ------
       0.17   11.7   0.1       0.44   10.3   0.0    1.6  2  Phage_30_3       Bacteriophage protein GP30.3
       0.89    9.6   7.6         43    4.1   0.0    2.7  2  DUF1451          Zinc-ribbon containing domain
        1.3    8.8   5.6        3.6    7.3   5.6    1.8  1  DNA_RNApol_7kD   DNA directed RNA polymerase, 7 kDa subunit


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   9.4e-07    0.0042      18      81 ..     447     507 ..     435     519 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 9.4e-07
  Exo_endo_phos_2  18 estlekllselkspkiiilGDfNakhplWgsedtdssargeeLiefleehslsllnllksgptf 81 
                       ++++ lls +++  ++ +GDfN  h  W+   t+s  +gee++ + e h+ls  +l   +pt+
       KHJ32882.1 447 PAAVQPLLSWTPT-GTVAAGDFNSVHWVWQPGVTKSYGQGEEIEIWAEMHNLS--SLIIGEPTH 507
                      5666777777775.89***************998889***************9..555555555 PP

>> Phage_30_3  Bacteriophage protein GP30.3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.7   7.4e+03      71      99 ..     348     376 ..     334     388 .. 0.76
   2 ?   10.3   0.0   9.8e-05      0.44      35      72 ..     567     605 ..     562     620 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.7
  Phage_30_3  71 Gkpfdrlspeykellddayeaaiqnkdfr 99 
                 G p +     y++  ++ y+a++++ + +
  KHJ32882.1 348 GAPTEEQMKMYRQAGEREYQAIVRAREAE 376
                 77777777888888899999988876655 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 9.8e-05
  Phage_30_3  35 knpem.qrricklsGkaakaaGrkknrwqdtqtlfWqGk 72 
                 +++e+   +ic++   a ka+Gr+knr + +  l+W  +
  KHJ32882.1 567 DEIEKaTEEICRVIKEAIKAVGRHKNRGKGRSGLWWTSE 605
                 555541468***************************865 PP

>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0    0.0095        43      27      58 ..      17      48 ..       7      67 .. 0.81
   2 ?    3.9   5.9     0.011        49     117     142 ..     289     314 ..     284     318 .. 0.93

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0095
     DUF1451 27 eaeeltkeelelvaeylkrDleeaarsleesk 58
                 +e+++ke++e +++yl+  ++++a++ ++ +
  KHJ32882.1 17 LTEDIEKEDAEAIKAYLRLAISNFAAADSSPS 48
                5799******************9998766555 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.011
     DUF1451 117 CekCgkelalkkteeippCpkCgate 142
                 C++C+ ++a k+ ++ p C +Cg+t+
  KHJ32882.1 289 CKRCNGHHATKNCSRAPSCGNCGSTN 314
                 ***********************997 PP

>> DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   5.6    0.0008       3.6       3      24 ..     307     330 ..     306     335 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0008
                     -SSS--B----SS..S----SSS- CS
  DNA_RNApol_7kD   3 CgeCgaevslkkg..dpiRCkeCG 24 
                     Cg+Cg+ + ++++  ++ +C++CG
      KHJ32882.1 307 CGNCGSTNHVENKcmAATKCRNCG 330
                     ******99987765599******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (623 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       884  (0.0493056); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.30s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4325.24
//
Query:       KHJ32883.1  [L=334]
Description: putative s-formylglutathione hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-51  174.1   0.0    1.1e-50  172.7   0.0    1.6  1  Esterase         Putative esterase
    0.00012   21.7   0.0    0.00016   21.2   0.0    1.2  1  Peptidase_S9     Prolyl oligopeptidase family
    0.00074   18.8   0.1      0.017   14.4   0.1    2.3  2  Hydrolase_4      Serine aminopeptidase, S33
     0.0031   16.5   0.0     0.0097   14.8   0.0    2.0  1  Chlorophyllase2  Chlorophyllase enzyme
     0.0096   15.8   0.0      0.015   15.1   0.0    1.5  1  Lipase_3         Lipase (class 3)
  ------ inclusion threshold ------
      0.011   15.3   0.1        0.1   12.2   0.1    2.3  2  DLH              Dienelactone hydrolase family
      0.025   14.4   0.0      0.049   13.4   0.0    1.6  1  Abhydrolase_2    Phospholipase/Carboxylesterase
       0.12   12.0   0.2       0.29   10.7   0.2    1.6  1  Abhydrolase_1    alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.7   0.0   4.7e-54   1.1e-50       1     248 [.      53     324 ..      53     328 .. 0.94

  Alignments for each domain:
  == domain 1  score: 172.7 bits;  conditional E-value: 4.7e-54
                 ETTTTEEEEEEEEE.CC................GGTTTEEEEEEE--TTHHCCHHHHHCHHCCCCHCCT.EEEEEECCCSS-TTTT.TSBTTSB..B.T CS
    Esterase   1 SealgreikvqvyLPedy...............spgrkypvvylldGltgwdqnfrakelleslaregeiaeviivvvprggessf.ysdwdlg..arf 81 
                 S++lg+e+ +++yLP+                 +++ k+pv+++l+Glt++ +n   k +l+ +a++++ia + ++++prg + +  ++++d+g  a f
  KHJ32883.1  53 SSTLGCEMSLNLYLPNTNnttttittsttkfenDKQIKFPVLFFLSGLTCTGDNCAEKGFLQYAASQKRIAIIYPDTSPRGLNIPGeDDSYDFGtgASF 151
                 78899999999999998778888888777777777889**********************************************99899********** PP

                 TEEETTCCCCCCHC..HHHHTHHHHHHHHHCSEECCC.EEEEEETHHHHHHHHHHHCSTTTCCEEEEES--S-CCHCHHHC...........TTCCHHH CS
    Esterase  82 yenategpgaeaye..tfltqeLlplldanfrtapdg.ravaGqSmGGlgALilalkhpdrFgsvssfSpivnpsnamWgq...........eekeawq 166
                 y++at+ p++++y   t++t eL+  l a f+  +++  +++G+SmGG+gAL+l lk+p++++svs+f+pi+np ++ Wgq           e++e+w+
  KHJ32883.1 152 YLDATQSPWSTNYNmeTYITVELPKELFAYFPQLDSSrISITGHSMGGHGALMLFLKNPGMYQSVSAFAPICNPIKCSWGQkafsgylgveaENSEKWK 250
                 *************999*******************9989************************************************************ PP

                 CC-CCCCHCHHCHTTSEEEEEEEECTTBCCCHT.SCHHHHHHHHHHHCCHHHHCCCCCCTT-SCCCC--SSHHHHHHHHHHCH CS
    Esterase 167 endpvllakelsaslkalriyldvGtseddlge.qlsveilevlarnrelkeqlaargvegedheydGghsweyWraqLiaal 248
                  nd++ l+++   s    r ++dvGt+++++++ ql +e+l+++ar++ + + l++r++eg+dh+y+       ++++++ ++
  KHJ32883.1 251 MNDATELVQK--WSGGSFRCLIDVGTNDQFYKQkQLLPENLAEAARKTGMDQDLVIRYQEGYDHSYY-------FVSSFASDH 324
                 ********75..9999***************999*********************************.......666666555 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   7.1e-08   0.00016      60     202 ..     184     329 ..     171     334 .] 0.73

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 7.1e-08
                   S--GGGEEEEEETHHHHHHHHHHHH-GGG-SEEEEESE---CCCHHCSTTSTHHHCCCC--TTTCHHHHHHHHHH-CGGG--..---EEEEEEETT- CS
  Peptidase_S9  60 yvdserlaitGgSyGGyltgaalnqrpdlFkaavaevpvvdvlrydsdtdllteeymewgnpeeneegykelspyspldnvk..aypplLlihGlaD 154
                   + ds+r+ itG+S GG  ++++  ++p +++ + a +p+ + ++    ++++   y +  ++  n e+ ++++ ++ l ++    + + L+ +G++D
    KHJ32883.1 184 QLDSSRISITGHSMGGHGALMLFLKNPGMYQSVSAFAPICNPIKCSWGQKAFSG-YLGVEAE--NSEK-WKMNDATELVQKWsgGSFRCLIDVGTND 276
                   789****************************************99999766644.6664443..5554.5888888877744688889999999999 PP

                   SSS-THH..HHHHHHHHH--S-SEEEEE..ETTS-SSTTSSHHHH.HHHHHHH CS
  Peptidase_S9 155 drvppae..alklvaaLqkkgknvllli..fpdegHgvgkprakv.eelarll 202
                   +    ++  ++ l++a +k+g + +l+i    + +H+++  ++ + + +++ +
    KHJ32883.1 277 QFYKQKQllPENLAEAARKTGMDQDLVIryQEGYDHSYYFVSSFAsDHVNHAA 329
                   98877763356888888899888555550044555766555544445555555 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.063   1.4e+02     180     227 ..      79     126 ..      66     129 .. 0.76
   2 !   14.4   0.1   7.5e-06     0.017      77     128 ..     189     237 ..     182     262 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.063
  Hydrolase_4 180 mkrleeraakitlPllllhGeaDkvvdpeasrelyerlgskdktlkly 227
                    +  e++++i++P+l++ ++     d+ a + +++ ++s++    +y
   KHJ32883.1  79 STTKFENDKQIKFPVLFFLSGLTCTGDNCAEKGFLQYAASQKRIAIIY 126
                  4445578899**********9999999999999999999865555555 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 7.5e-06
  Hydrolase_4  77 plfllGhSmGGliallyllrypdkvaglilsaPalkikaklkappllklllk 128
                  ++ + GhSmGG  al ++l++p  ++ +  +aP +++ +    ++ +k+++ 
   KHJ32883.1 189 RISITGHSMGGHGALMLFLKNPGMYQSVSAFAPICNPIK---CSWGQKAFSG 237
                  67899*****************************98763...5555555544 PP

>> Chlorophyllase2  Chlorophyllase enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   4.3e-06    0.0097      13     123 ..      87     221 ..      76     283 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 4.3e-06
  Chlorophyllase2  13 eageYpvllflhGylll..nslYsqlLkhiashgfivvap.......................qlyk..vaeadakeiksaakvlnWlakgLes 79 
                      ++ ++pvl+fl G++++  n   +  L+  as + i++                          +y   ++    +  ++  ++ ++++ +L +
       KHJ32883.1  87 KQIKFPVLFFLSGLTCTgdNCAEKGFLQYAASQKRIAIIYpdtsprglnipgeddsydfgtgaSFYLdaTQ----SPWSTNYNMETYITVELPK 176
                      56689********9965226677889999999999977655999999999988876655443322221111....2222333333344444433 PP

  Chlorophyllase2  80 vlp.eevepdlsklalsgHSrGgktafalalgkaktslkfsalig 123
                       l     + d s+++++gHS Gg+ a+ l l++  +  ++sa   
       KHJ32883.1 177 ELFaYFPQLDSSRISITGHSMGGHGALMLFLKNPGMYQSVSAFAP 221
                      3332222457789******************99987777777654 PP

>> Lipase_3  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   6.8e-06     0.015      49      82 ..     172     205 ..      69     214 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 6.8e-06
                 HHHHHHHHHHHHHTT-EEEEEEEETHHHHHHHHH CS
    Lipase_3  49 eqvlkelkrllekypeysivvtGHSLGgalAlLa 82 
                  ++ kel   + +  + +i +tGHS+Gg  Al++
  KHJ32883.1 172 VELPKELFAYFPQLDSSRISITGHSMGGHGALML 205
                 33444444445555589***********999875 PP

>> DLH  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.7   6.1e+03     135     151 ..      81      97 ..      77     100 .. 0.79
   2 ?   12.2   0.1   4.5e-05       0.1      89     188 ..     179     313 ..     171     330 .. 0.71

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.7
         DLH 135 keleeaakikapilalf 151
                  + e++++ik p+l+++
  KHJ32883.1  81 TKFENDKQIKFPVLFFL 97 
                 56788999999*99986 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 4.5e-05
         DLH  89 lksvpevstkkvgvvGfCmGGalalllaaevpevdaavafYG...............................lspekeleeaakikapilalfgeeDe 156
                  +++p+ +++++ ++G  mGG  al l  ++p +  +v+ +                                + + + +++    +   l+ +g++D+
  KHJ32883.1 179 FAYFPQLDSSRISITGHSMGGHGALMLFLKNPGMYQSVSAFApicnpikcswgqkafsgylgveaensekwkmNDATELVQKWSGGSFRCLIDVGTNDQ 277
                 6789999************************87777777776688888888888888888888887776643333333333333444456777888888 PP

         DLH 157 fipade..vekleealkaanvdlelkv.Y.pgagHa 188
                 f ++++   e+l+ea ++ ++d +l++ Y +g +H+
  KHJ32883.1 278 FYKQKQllPENLAEAARKTGMDQDLVIrYqEGYDHS 313
                 888887555778888888777766554241344565 PP

>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.2e-05     0.049      90     141 ..     166     224 ..      80     237 .. 0.64

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.2e-05
                    HHHHHHHHHHTT.......--GGGEEEEEETHHHHHHHHHHHT-SS--SEEEEES---T CS
  Abhydrolase_2  90 leelidaelkkg.......ipssriiigGFSqGaalalylaltlpkklggivafsgalp 141
                    +e  i +el k        ++ssri i G S+G+  al l l+ p  ++ + af   + 
     KHJ32883.1 166 METYITVELPKElfayfpqLDSSRISITGHSMGGHGALMLFLKNPGMYQSVSAFAPICN 224
                    34445555555556666889*******************************99987764 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.2   0.00013      0.29       2     102 ..      93     220 ..      92     235 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00013
                    EEEEE-STTTCGGGGTTGHHHHHHHHT.TSEEEEEEETTSTTSSSTTTGB........................CHHSHHHHHHHHHHHHHHCTTS CS
  Abhydrolase_1   2 vlvilhGlpgssdvwaerglapaLakd.gfdvillDlrGvgySspapacin.......................ddygtasvaddldrildalgdd 73 
                    vl +l Gl+ ++d+ ae+g+ ++ a + +  +i +D    g   p+ +                          ++y t+ + + l +   +l+  
     KHJ32883.1  93 VLFFLSGLTCTGDNCAEKGFLQYAASQkRIAIIYPDTSPRGLNIPGEDDSYdfgtgasfyldatqspwstnynmETYITVELPKELFAYFPQLDSS 188
                    566666666666666666666666666666666666666666666665444555555445555555555455667779999999999889999999 PP

                    SEEEEEETHHHHHHHHHHHHH...GGGEEEEE CS
  Abhydrolase_1  74 kltlvGhSmGGmialayaaey...perVkalv 102
                    ++ + GhSmGG  al++++++    ++V+a++
     KHJ32883.1 189 RISITGHSMGGHGALMLFLKNpgmYQSVSAFA 220
                    9******************9955556666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 2387.82
//
Query:       KHJ32884.1  [L=623]
Description: hypothetical protein EV44_g5278 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0084   16.5   1.8      0.013   15.9   0.3    2.1  2  EnY2      Transcription factor e(y)2
  ------ inclusion threshold ------
        1.1    9.9   7.7       0.13   12.9   2.7    2.1  2  PEHE      PEHE domain


Domain annotation for each model (and alignments):
>> EnY2  Transcription factor e(y)2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       1.5   1.4e+04       7      40 ..     180     213 ..     176     214 .. 0.66
   2 !   15.9   0.3   1.4e-06     0.013      14      81 ..     330     397 ..     323     398 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.5
                 HHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHH CS
        EnY2   7 kLvesGererlkelLrerLeesGWrdevkelcke 40 
                 +L+++Ge  +l+  + e  e++  ++ v +l++e
  KHJ32884.1 180 NLKSNGELCDLALIIDEARENTHVEEGVDDLARE 213
                 6777777777777777766666666666666665 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 1.4e-06
                 HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH..HTSS.CHHHHHHHHHHHHHHHS-HHHHHHHHHHHH CS
        EnY2  14 rerlkelLrerLeesGWrdevkelckeiirekgleeevsveelveeitpkaralVPdevkkellqrIr 81 
                 + +l +l ++ Lee+GW ++  + + e++++++l+ + s +++++ +tp +r++V +e ++   ++Ir
  KHJ32884.1 330 KLKLYSLVKHFLEEEGWGERCFSFVGEEANQRKLKWPDSKKKIIKLVTPLMRRMVTNERQRRYAKEIR 397
                 66899999**********************999997679******************99999988887 PP

>> PEHE  PEHE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.2       1.1     1e+04      80      80 ..     152     152 ..     118     186 .. 0.46
   2 ?   12.9   2.7   1.4e-05      0.13      40     115 ..     384     459 ..     381     521 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.1
        PEHE  80 n 80 
                 +
  KHJ32884.1 152 S 152
                 1 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 1.4e-05
        PEHE  40 EekerkRwdlqrnreqqrreslrqRkeskkgrntpqpgsenpltkqppspddsesihvldevpvvasplpplspel 115
                 +  er+R+ + ++r ++r ++ ++R++ +k+  t+++  e+++    +++++++  +++++++ v s+  +l+ ++
  KHJ32884.1 384 VTNERQRRYAKEIRMEKRLGNRNKRENTTKSTVTSSKPVETEIIFCSSKNQETQIGESCSQLQAVPSNSFNLNSNT 459
                 568******************9***999886666666666666666666666666666666666665544444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (623 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 4226.68
//
Query:       KHJ32885.1  [L=707]
Description: putative lmbr1 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-99  334.6  15.2    1.5e-99  334.2  15.2    1.1  1  LMBR1     LMBR1-like membrane protein
     0.0059   17.0   0.4        2.5    8.6   0.0    2.5  2  ACP_PD    Acyl carrier protein phosphodiesterase
  ------ inclusion threshold ------
      0.022   15.1   0.9      0.042   14.2   0.9    1.4  1  Muted     Organelle biogenesis, Muted-like protein


Domain annotation for each model (and alignments):
>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  334.2  15.2  2.6e-103   1.5e-99       4     510 .]      33     541 ..      30     541 .. 0.93

  Alignments for each domain:
  == domain 1  score: 334.2 bits;  conditional E-value: 2.6e-103
       LMBR1   4 iillllflllfllallllrrykrkkdqeavvkllvllalalsflivlllPlDiastiyrqnealypcsyylqwlseslikvlWrivYwlsnlllwiilP 102
                  ++++++l+++ l+lll+r+y   ++++a+  ++++lalal+++i+ll+P+D+as + ++n           wl+e++i+v Wri+Yw +++l+w+ilP
  KHJ32885.1  33 LLSSIALLFICGLVLLLIRHYLPFRKTPAYLFIPIFLALALPASIILLVPIDLASIASDSN----IRGNRGIWLPERVILVSWRILYWETFFLTWFILP 127
                 5678999************************************************666665....4666677*************************** PP

       LMBR1 103 faqfYvesggftgkgklkrslyenaiiyllllvivlglliyvliilqklsllsiksllpilislantwGlvllilllGyGlvelPrslwreiksdldee 201
                 ++ +Y + g++++k++l  sl++n+++++++l  +l ++iy ++   ++s++   +++++l++ a++w l+++i+l+G+Glv++Pr+ +r  +++l+++
  KHJ32885.1 128 ILGEYADTGYRDPKSRLIWSLKRNLVYQGVVLGSGLTIMIYFFVS-AGVSFT---TFKGLLVATAYFWSLLFAIFLMGHGLVAIPRNFFR--NANLKSK 220
                 *********************************************.******...9**********************************..******* PP

       LMBR1 202 lkklyfeaaklntekeeaereledllkevkklrksisesdp.lrkyleeilk......................kvPeeiaeklksnenkteeslakle 277
                 l++ly +aak+n+++ ++  eledl + v+++ +++s+ d+ +++++ee+ +                      + P  i          te++la+l 
  KHJ32885.1 221 LDYLYSHAAKINEKLVDSVFELEDLEEIVNEIADRKSNMDNkFQDWIEELTDeynsmdirprypssqripssefNLPRII----------TEKYLADLS 309
                 ****************************************99**********8888887775555553333333333333..........777****** PP

       LMBR1 278 kqlikalqkrertekqwkrllekalelediiknksskekefkssessrrgefakqgklkltptleyywaklllplvllilsiilvllsiiiilseltkl 376
                 + l  a +++ r  ++w + +++a+e+   +++ s  + e+ +s  s+++++ ++  ++ltp++++y + +llp ++ +l ++++l+si+ii+sel+k 
  KHJ32885.1 310 RTLSIAHHTHLRYLEEWHQVVKNAAEIRGTLDAYSLGRIEIGKS--SPNASYLER-FTILTPRTRFYFRYYLLPNLNKFLGLLFSLASIFIIWSELIKP 405
                 ****************************9999999999999988..444455444.4699*************************************99 PP

       LMBR1 377 lekpplslfalfievsaessfglfga..elieillilYlmlcayvglfklklpnfyrlaphhqTdmsslifnaalllrltsPlclnflglihfd...eT 470
                 + +p +s++++++ ++ +s++g +g+  ++i   +ilY++l+a+++l+++k++   +l   ++T  +s +++a +++rl++Pl++nf++++  +   +T
  KHJ32885.1 406 I-NPLFSIISVTVIHHPNSEYGEIGFagQIIAGSWILYMCLAALASLTEFKVWRGHALIY-RNTRGESAVWYAYQVARLSVPLAFNFMTFLDPSlysQT 502
                 9.**************************************************99999998.9*****************************666***** PP

       LMBR1 471 aFtqllGsmdvleflggfgfviyypifilllvvatlfnll 510
                  F+ +lG++++l++l+ + f+++ p+fi+++v+atlf l+
  KHJ32885.1 503 VFYGFLGNLINLTPLS-SWFDMLWPTFIIFPVFATLFGLY 541
                 ****************.********************876 PP

>> ACP_PD  Acyl carrier protein phosphodiesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.1    0.0026        15      49      92 ..     233     277 ..     214     280 .. 0.84
   2 !    8.6   0.0   0.00042       2.5      30      76 ..     644     691 ..     627     702 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0026
      ACP_PD  49 edwLesYaelegieralqrma.rrlkrasklaeaieeleenyael 92 
                 e++  s  ele +e++++++a r+ ++++k+++ ieel+++y+ +
  KHJ32885.1 233 EKLVDSVFELEDLEEIVNEIAdRKSNMDNKFQDWIEELTDEYNSM 277
                 5666777789999********888888999**********99876 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00042
      ACP_PD  30 kneealPerlqrllprmieedwLesYaelegieralqrma.rrlkras 76 
                 ++++++  r++++++ ++ ++wLe+  +   i + +++++  r +r++
  KHJ32885.1 644 NSHQTFWHRFKNTVETIHDQNWLENVVDNFKIPKWISGIDkARSNRNE 691
                 455667789******************************955555554 PP

>> Muted  Organelle biogenesis, Muted-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.9   7.1e-06     0.042     108     143 ..     243     278 ..     209     280 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 7.1e-06
       Muted 108 aeweeflkelqekkeevDeefeekveelkekYsele 143
                 +  ee ++e++++k+++D++f++ +eel+++Y+ ++
  KHJ32885.1 243 EDLEEIVNEIADRKSNMDNKFQDWIEELTDEYNSMD 278
                 4568889*************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (707 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       831  (0.0463495); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 4740.48
//
Query:       KHJ32886.1  [L=677]
Description: putative transcription initiation factor tfiid subunit 12 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.1e-19   68.5   0.0    1.1e-18   67.4   0.0    1.6  1  TFIID_20kDa    Transcription initiation factor TFIID subunit 
     0.0017   18.6   0.0     0.0054   17.0   0.0    1.9  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a


Domain annotation for each model (and alignments):
>> TFIID_20kDa  Transcription initiation factor TFIID subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.4   0.0   1.2e-22   1.1e-18       1      68 []     558     636 ..     558     636 .. 0.99

  Alignments for each domain:
  == domain 1  score: 67.4 bits;  conditional E-value: 1.2e-22
                  -HHHHHHHHHCC...........-SS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEE-HHHHHHHHHHHS-- CS
  TFIID_20kDa   1 sKrklqdLvqqv...........dsetkldedvedlLleiaddFvesvtkfacklakhRksdklevrDiqlhlernynm 68 
                  sK+kl++Lv+q+           d+  +l +dve+ +l++ad+Fv++v ++ack ak R s +le rDiql ler yn+
   KHJ32886.1 558 SKKKLDELVRQItgggqsgsdggDGIGSLAPDVEENILQVADNFVDQVLQAACKNAKERGSRTLEIRDIQLTLERGYNI 636
                  7*****************************************************************************8 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0     6e-07    0.0054      17      63 ..     582     628 ..     578     630 .. 0.93

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 6e-07
                    TXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHH CS
  CBFD_NFYB_HMF  17 darkiakdAkeliaecveefieelaseAaeickkekrKtikaehikl 63 
                    +++ +a d+ e i +++  f+ +++++A++ +k+++++t+   +i+l
     KHJ32886.1 582 GIGSLAPDVEENILQVADNFVDQVLQAACKNAKERGSRTLEIRDIQL 628
                    6788999**************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (677 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      6726  (0.375146); expected 358.6 (0.02)
Passed bias filter:                     1646  (0.0918066); expected 358.6 (0.02)
Passed Vit filter:                      1283  (0.07156); expected 17.9 (0.001)
Passed Fwd filter:                       264  (0.0147247); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 3.67u 0.45s 00:00:04.12 Elapsed: 00:00:00.76
# Mc/sec: 2702.78
//
Query:       KHJ32887.1  [L=258]
Description: putative dash complex subunit spc34 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-35  121.3  10.5    1.5e-31  110.1  10.5    2.1  1  DASH_Spc34     DASH complex subunit Spc34
  ------ inclusion threshold ------
      0.011   15.6   1.8      0.024   14.5   1.8    1.6  1  DASH_Spc19     Spc19
      0.038   14.2   2.2       0.16   12.2   0.1    2.3  2  GRIN_C         G protein-regulated inducer of neurite outgrow
        1.3    9.6   4.2       0.57   10.7   1.9    1.5  2  POX            Associated with HOX


Domain annotation for each model (and alignments):
>> DASH_Spc34  DASH complex subunit Spc34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.1  10.5   3.3e-35   1.5e-31       1     254 [.       4     240 ..       4     241 .. 0.79

  Alignments for each domain:
  == domain 1  score: 110.1 bits;  conditional E-value: 3.3e-35
  DASH_Spc34   1 LdscLeeikqSveSisslkFkpPgIFtNAlvkkddItkLirDtepeeeaLfkidkvekkpeRkDGkkgvlDylteretnlkrnrrlglpekkpivhvPk 99 
                 L+++Le+i+  +eSi++l F+  +IFtNAl++++dIt+LirDte++e+aLf++                     e  t+ k +         ++++  +
  KHJ32887.1   4 LEKHLEQISLYAESIATLSFQTKKIFTNALLHTPDITSLIRDTESHERALFSVLSP-----------------NESGTTSKAES--------SAISSRR 77 
                 799**************************************************985.................23334444433........3333333 PP

  DASH_Spc34 100 eedsgvlevlakkfksdkqirqlllalqngsvttgedsgsssekanrrktafvedfdvelllkvleelltkyplleakekieelreeYeelseeieele 198
                    ++v+++ + +f+  +     + a +  +v+t    +  +++ ++++ ++  ++dve+ll+++e+l  +y +++  e+++ lr+++ ++s  i ++e
  KHJ32887.1  78 ---QTVFKAVRDEFTAPR---ACVRASRRNTVITTALGTDLKREMKKSEGIINGEVDVEVLLRGIEKLNAVYCVPGVIEQVQDLRNRFVQVSRGIPQYE 170
                 ...244444444554333...333444444444433333333334677889999********************************************* PP

  DASH_Spc34 199 aeiaeQkkqLeaqnknesessseddsesetsk..............skdvdelirkEeeeIeeLerklke 254
                  ++++Q+++Le++n+ ++ ++ e d+ +e+++              s ++d +i+ Ee+eI eLe++ +e
  KHJ32887.1 171 GKVEKQTNELERMNRGRQTENRERDNFHENDNdnmeihseednimdSMVTDGDIQMEEREIMELEERRRE 240
                 ***************998877666555544448899*********999*****************98776 PP

>> DASH_Spc19  Spc19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   1.8   5.5e-06     0.024      66     157 .]     149     248 ..     144     248 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 5.5e-06
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHT-XXXXXXXXXXXX....XXXX.........XXXXXXXXXXXXXXXXXXXXXXXX CS
  DASH_Spc19  66 eellekaekeleklerreetLkaklelqegrlsnaesskkeeeeseeskeeeeeeenkeeekskkk.........ltkeelerlkkLkqkKerLkytle 155
                  e+++ +++   + +r   + + k+e+q   l+++++ +++e+ ++++ + e++++n e ++++++           + e++++ +L +++++L ++++
  KHJ32887.1 149 IEQVQDLRNRFVQVSRGIPQYEGKVEKQTNELERMNRGRQTENRERDNFH-ENDNDNMEIHSEEDNimdsmvtdgDIQMEEREIMELEERRRELLESID 246
                 56666677777777777777778888888888886555554444444333.444444444444444677788887777889*****************9 PP

                 XX CS
  DASH_Spc19 156 rL 157
                 r+
  KHJ32887.1 247 RM 248
                 96 PP

>> GRIN_C  G protein-regulated inducer of neurite outgrowth C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   3.5e-05      0.16      80     132 ..      48      98 ..      39      99 .. 0.70
   2 ?    1.2   0.4     0.091   4.1e+02      74     119 ..     173     219 ..     166     227 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.5e-05
      GRIN_C  80 ehekkiaarqsslrksikkgeedskkkrkrrqpnvFrsllqnvrrpnCCsras 132
                  he+ + +  s  + ++++ +++s++ + rrq+ vF+++ +++  p+ C+ras
  KHJ32887.1  48 SHERALFSVLSPNESGTTS-KAESSAISSRRQT-VFKAVRDEFTAPRACVRAS 98 
                 5666655545555555555.4445666666766.9****************96 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.091
      GRIN_C  74 Lekqikehekkiaarqsslrksikkgeedsk.kkrkrrqpnvFrsll 119
                 +ekq +e e+  + rq++ r+  + +e+d++  + +  + n+  s++
  KHJ32887.1 173 VEKQTNELERMNRGRQTENRERDNFHENDNDnMEIHSEEDNIMDSMV 219
                 57777888888877888888877777777764566666677777765 PP

>> POX  Associated with HOX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       2.4   1.1e+04      57      57 ..      72      72 ..      47     102 .. 0.58
   2 ?   10.7   1.9   0.00013      0.57      10      88 ..     151     250 ..     149     254 .. 0.65

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.4
         POX 57 s 57
                +
  KHJ32887.1 72 A 72
                1 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00013
         POX  10 aaqelLdevvsvga...........kksksssaskkkkkkakkskeseegegsssssssass................saelssaerqelqrkkakLls 81 
                  +q+l + +v+v++           +      +++ +++++ +++e++e ++ +++ +++++                + ++++ e +el++++ +Ll+
  KHJ32887.1 151 QVQDLRNRFVQVSRgipqyegkvekQ------TNELERMNRGRQTENRERDNFHENDNDNMEihseednimdsmvtdgDIQMEEREIMELEERRRELLE 243
                 57899999999984566675544332......3333333333333333333333333333334455678889999999999999999************ PP

         POX  82 mldeVdr 88 
                  +d +dr
  KHJ32887.1 244 SIDRMDR 250
                 *999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1420  (0.0792013); expected 358.6 (0.02)
Passed bias filter:                      605  (0.0337442); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 1991.74
//
Query:       KHJ32888.1  [L=582]
Description: putative proteasome regulatory particle subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-25   89.1   2.0    5.6e-25   87.5   2.0    1.9  1  Rpn3_C    Proteasome regulatory subunit C-terminal
      1e-18   67.8   0.3      3e-18   66.3   0.3    1.9  1  PCI       PCI domain


Domain annotation for each model (and alignments):
>> Rpn3_C  Proteasome regulatory subunit C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.5   2.0   6.3e-29   5.6e-25       1      66 [.     508     571 ..     508     574 .. 0.97

  Alignments for each domain:
  == domain 1  score: 87.5 bits;  conditional E-value: 6.3e-29
      Rpn3_C   1 DvYsTkePqeaFdeRIkFclqlHneavkAMRYpedakkkelesaeearerqqeeelakelededld 66 
                 DvY+T+eP +aF++RI+ cl+lH+e+vkAMR+p+++++ el++a+earer  e+e+ake+++++ld
  KHJ32888.1 508 DVYATREPGDAFHDRIRACLTLHDESVKAMRFPMNQHRLELKNAQEARER--EREMAKEIQEGELD 571
                 9*************************************************..**********8877 PP

>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.3   0.3   3.3e-22     3e-18       2     104 ..     402     504 ..     401     505 .. 0.96

  Alignments for each domain:
  == domain 1  score: 66.3 bits;  conditional E-value: 3.3e-22
                 HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSH.HHHHHHHHHHHHTTSSSEEEETTTT CS
         PCI   2 sysdllkalrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsv.devEkilvklIrdgeirakidqesg 99 
                 +y +l++a+r g ls+f+  +k++  +++++d ++ l+ +L+++v+++ +r++s++ys+isl ++   l+l + + +E+i++k+Irdg i+a++d+e g
  KHJ32888.1 402 PYFHLVQAVRLGLLSEFENVVKQN-TDIFRRDCTYSLILRLRQNVIKTGIRMMSLSYSCISLRDICLRLKLESeESAEYIVAKAIRDGVIEASLDRERG 499
                 799*********************.**********************************************99899*********************99 PP

                 EEEEC CS
         PCI 100 ivvfk 104
                  +  k
  KHJ32888.1 500 FMRSK 504
                 88765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (582 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4101.95
//
Query:       KHJ32889.1  [L=311]
Description: putative bem46 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      4e-18   65.6   0.0    1.2e-13   50.9   0.0    2.2  2  Hydrolase_4    Serine aminopeptidase, S33
    4.9e-10   39.5   0.0    4.5e-06   26.5   0.0    2.2  2  Abhydrolase_1  alpha/beta hydrolase fold
    1.3e-06   27.3   0.0       0.53    8.9   0.0    3.1  3  AXE1           Acetyl xylan esterase (AXE1)
    5.6e-05   22.7   0.0    0.00016   21.3   0.0    1.8  1  Peptidase_S9   Prolyl oligopeptidase family
    0.00014   21.6   0.0    0.00035   20.3   0.0    1.6  2  FSH1           Serine hydrolase (FSH1)
     0.0023   17.5   0.0        1.7    8.1   0.0    2.2  2  DLH            Dienelactone hydrolase family
     0.0087   15.9   0.0      0.014   15.3   0.0    1.3  1  Abhydrolase_3  alpha/beta hydrolase fold
  ------ inclusion threshold ------
      0.011   15.7   0.0       0.46   10.4   0.0    2.5  2  BAAT_C         BAAT / Acyl-CoA thioester hydrolase C terminal
      0.012   14.6   0.0      0.018   14.0   0.0    1.1  1  DUF818         Chlamydia CHLPS protein (DUF818)
      0.016   14.8   0.0      0.078   12.5   0.1    1.8  2  LIDHydrolase   Lipid-droplet associated hydrolase
      0.023   14.3   0.0        3.7    7.1   0.0    2.1  2  Peptidase_S15  X-Pro dipeptidyl-peptidase (S15 family)
      0.028   15.0   0.0      0.043   14.4   0.0    1.4  1  Abhydrolase_6  Alpha/beta hydrolase family
      0.085   12.6   0.0        2.5    7.8   0.0    2.3  1  Abhydrolase_2  Phospholipase/Carboxylesterase


Domain annotation for each model (and alignments):
>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.9   0.0   8.6e-17   1.2e-13       3     132 ..      97     228 ..      96     239 .. 0.84
   2 !   13.2   0.0   2.8e-05     0.038     191     227 ..     240     276 ..     217     283 .. 0.77

  Alignments for each domain:
  == domain 1  score: 50.9 bits;  conditional E-value: 8.6e-17
  Hydrolase_4   3 pkavvvlvHGlaehsgryaelaeaLaaq.GfavyalDhrGhGrsegkrghvpsfddyvdDlaafvekvkeehpel..plfllGhSmGGliallyllry 97 
                   k +v+++HG a  +g    +a+ L+++ G++v++l +rG+G s   +g  p+ + ++ D++++++ +++++ ++  +++++G+S GG++++++++++
   KHJ32889.1  97 KKTIVLMFHGNAGNIGHRVPIAKILVQRmGMSVFMLEYRGYGLS---TG-SPEETGLMLDAQTAFTYLRKREDTKnyNIVVYGQSIGGAVSIQLVAKN 190
                  5789*********************9866***************...33.778999999*********977666666******************777 PP

  Hydrolase_4  98 pd..kvaglilsaPalkikaklk.appllklllkllgk 132
                  +d  ++ glil +++l++++ ++ + p  ++++ l  +
   KHJ32889.1 191 QDddHLIGLILENTFLSMRKLIPsIVPTSRFIALLCHQ 228
                  7766888************8876666666665555444 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 2.8e-05
  Hydrolase_4 191 t.lPllllhGeaDkvvdpeasrelyerlgskdktlkly 227
                  + +P+l+l+G +D++v+p+  r+l+e ++s  k  k +
   KHJ32889.1 240 SkVPILFLSGLKDEIVPPDHMRRLFEICRS-TKIWKPF 276
                  359***********************9998.5555555 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   3.3e-09   4.5e-06       2     106 ..     100     204 ..      99     220 .. 0.84
   2 !   10.9   0.0   0.00019      0.26     200     252 ..     238     283 ..     218     287 .. 0.79

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 3.3e-09
                    EEEEE-STTTCGGGGTTGHHHHHHHHT.TSEEEEEEETTSTTSSSTTTGB.CHHSHHHHHHHHHHH..HHHCTTSSEEEEEETHHHHHHHHHHHHH CS
  Abhydrolase_1   2 vlvilhGlpgssdvwaerglapaLakd.gfdvillDlrGvgySspapacinddygtasvaddldri..ldalgddkltlvGhSmGGmialayaaey 94 
                     ++++hG +g+ +      +a+ L ++ g  v++l  rG+g S+ +p++   +  + + +  + ++  ++ +++ ++++ G+S GG+++ ++ a++
     KHJ32889.1 100 IVLMFHGNAGNIGHRVP--IAKILVQRmGMSVFMLEYRGYGLSTGSPEE---TGLMLDAQTAFTYLrkREDTKNYNIVVYGQSIGGAVSIQLVAKN 190
                    699*******9998888..888888888*******************95...4555566666667777**************************** PP

                    ..GGGEEEEEEESE CS
  Abhydrolase_1  95 ..perVkalvllga 106
                      +++  +l+l ++
     KHJ32889.1 191 qdDDHLIGLILENT 204
                    88888888888777 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00019
                    HHHHHHCTHHHHSEEEEEEETTCSSSCHHHHHHHHHCHTS.EEEEEEETCSSSH CS
  Abhydrolase_1 200 lllrlrelknvlaptlvisgtsDplvppkaledlaqllpk.krlvvisdagHla 252
                    ++         ++p+l++sg +D +vpp+++++l + +++ k ++ ++d+ H++
     KHJ32889.1 238 SI--------SKVPILFLSGLKDEIVPPDHMRRLFEICRStKIWKPFPDGDHNS 283
                    33........235************************99988999999999975 PP

>> AXE1  Acetyl xylan esterase (AXE1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0   0.00038      0.53      65     124 ..      78     141 ..      68     150 .. 0.78
   2 !    7.3   0.0    0.0012       1.6     154     195 ..     149     190 ..     146     207 .. 0.87
   3 !    7.8   0.0   0.00084       1.2     256     301 ..     238     283 ..     233     297 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00038
                 GGEEEEEEEEEES.SS..SSEEEEEEEE-TT--..GGGHHHHHHHHHTT-EEEEEE-TTTS..S CS
        AXE1  65 rgarikaklvlPkeke..eklPavvefhGYegs..rgeihdllnyaaaGyavvvmdvRGqgges 124
                  g+++ a +++P++++  +k  +v+ fhG  g+  +  +  ++    +G++v++++ RG g ++
  KHJ32889.1  78 DGEHLSAFYIRPSKNSyfDKKTIVLMFHGNAGNigHRVPIAKILVQRMGMSVFMLEYRGYGLST 141
                 67889999****9776447999********99943445667888899************98433 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0012
                 HHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH- CS
        AXE1 154 vflDavrlveivaslpevDeeRvavlGasqGGalalavaale 195
                 + lDa  +   ++  + + +  ++v+G+s GGa+++   a +
  KHJ32889.1 149 LMLDAQTAFTYLRKREDTKNYNIVVYGQSIGGAVSIQLVAKN 190
                 57899999999999999******************9877655 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.00084
                 CC--S-EEEEEETT-SSS-HHHHHHHHHH--SSEEEEEETT-STTT CS
        AXE1 256 krvkaevllsvgLeDevcpPstvfaaynkletekeikvyeefahea 301
                 + +k+++l+  gL+De+ pP  +  ++    ++k  k +++ +h++
  KHJ32889.1 238 SISKVPILFLSGLKDEIVPPDHMRRLFEICRSTKIWKPFPDGDHNS 283
                 56899***************************99999999999975 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   1.1e-07   0.00016      47     186 ..     152     281 ..     121     301 .. 0.83

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 1.1e-07
                   HHHHHHHHHHHTTS--GGGEEEEEETHHHHHHHHHHH..H-GGG-SEEEEESE---CCCHHCSTTS.THHHCCCC--TTTCHHHHHHHHHH-CGGG- CS
  Peptidase_S9  47 DfiaaaealakegyvdserlaitGgSyGGyltgaaln..qrpdlFkaavaevpvvdvlrydsdtdl.lteeymewgnpeeneegykelspyspldnv 140
                   D  +a  +l k++ +++ +++++G S GG ++  +++  q +d   +++ e+ ++ +++   +  +  t ++    ++     + ++   y p    
    KHJ32889.1 152 DAQTAFTYLRKREDTKNYNIVVYGQSIGGAVSIQLVAknQDDDHLIGLILENTFLSMRKLIPS--IvPTSRFIALLCH-----QVWASEDYLPSIS- 240
                   888999***********************9987666544889999999******999987766..7566699999997.....5778888888666. PP

                   ----EEEEEEETT-SSS-THHHHHHHHHHH--S-SEEEEEETTS-S CS
  Peptidase_S9 141 kaypplLlihGlaDdrvppaealklvaaLqkkgknvlllifpdegH 186
                     ++p+L++ Gl+D+ vpp +  +l++ +++++    ++ fpd +H
    KHJ32889.1 241 --KVPILFLSGLKDEIVPPDHMRRLFEICRSTKI---WKPFPDGDH 281
                   ..99**********************99998765...455555555 PP

>> FSH1  Serine hydrolase (FSH1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       2.4   3.3e+03       4      15 ..      98     109 ..      94     120 .. 0.76
   2 !   20.3   0.0   2.6e-07   0.00035      83     194 ..     150     273 ..     133     282 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2.4
        FSH1   4 kkkiLcLhGytq 15 
                 k+ +L++hG + 
  KHJ32889.1  98 KTIVLMFHGNAG 109
                 566888888764 PP

  == domain 2  score: 20.3 bits;  conditional E-value: 2.6e-07
        FSH1  83 yegleesldavkdyikengpfdGiiGFSqGaalaallaslleellkea.................shpslkfailvsGfkleepkyeeyyeedki.qtp 163
                 + + + ++ ++++  ++++    + G S G+a++  l+++ +  ++                     p  +f+ l++     +++y      ++i ++p
  KHJ32889.1 150 MLDAQTAFTYLRKREDTKNYNIVVYGQSIGGAVSIQLVAKNQDDDHLIglilentflsmrklipsIVPTSRFIALLCHQVWASEDYL-----PSIsKVP 243
                 556667777777777777777778899999999988888888766555888888888655555544444466666665555444333.....33349** PP

        FSH1 164 tLhvlGelDtvvdeerseaLaeafknsskvl 194
                 +L++ G +D++v+++ +++L e +++ +k++
  KHJ32889.1 244 ILFLSGLKDEIVPPDHMRRLFEICRS-TKIW 273
                 *************************9.5444 PP

>> DLH  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0012       1.7      78     120 ..     149     191 ..     139     198 .. 0.84
   2 !    7.1   0.0    0.0025       3.4     142     173 ..     239     270 ..     229     281 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0012
         DLH  78 vlddlkaavaylksvpevstkkvgvvGfCmGGalalllaaevp 120
                 ++ d++ a  yl++++++++ +++v G  +GGa++++l a+++
  KHJ32889.1 149 LMLDAQTAFTYLRKREDTKNYNIVVYGQSIGGAVSIQLVAKNQ 191
                 445666999*****************************99984 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0025
         DLH 142 kikapilalfgeeDefipadevekleealkaa 173
                  +k+pil+l g +De++p d++ +l e ++  
  KHJ32889.1 239 ISKVPILFLSGLKDEIVPPDHMRRLFEICRST 270
                 6799*****************99998888765 PP

>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0     1e-05     0.014       2      96 ..     102     194 ..     101     216 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1e-05
                    EEE--STTTS--TTTTHHHHHHHHHHHTSEEEEEE--...-TTTS-TTHH.HHHHHHHHHHHHHTHHHHTETTCEEEEEEETHHHHHHHHHHHHHH CS
  Abhydrolase_3   2 vyfHGGGfvlgsldthdalcrelakelgavvvsvdYr...lAPehpfPaa.vedalaalrwlaeqawelgadpsrivlaGdSaGGnlaaavalrar 93 
                    + fHG +   g++    ++++ l++++g+ v++ +Yr   l+   p  +  + da +a+ +l+++     +++ +iv+ G+S GG  + +++ + +
     KHJ32889.1 102 LMFHGNA---GNIGHRVPIAKILVQRMGMSVFMLEYRgygLSTGSPEETGlMLDAQTAFTYLRKR---EDTKNYNIVVYGQSIGGAVSIQLVAKNQ 191
                    5667764...5666667888999999999999999987666666666665156999999999999...579999*****************99998 PP

                    HTT CS
  Abhydrolase_3  94 deg 96 
                    d++
     KHJ32889.1 192 DDD 194
                    874 PP

>> BAAT_C  BAAT / Acyl-CoA thioester hydrolase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00033      0.46       7      39 ..     154     186 ..     153     195 .. 0.89
   2 ?    2.5   0.0     0.087   1.2e+02     114     134 ..     240     260 ..     236     267 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00033
                 HHHHHHHHCSTTB--SSEEEEEETHHHHHHHHH CS
      BAAT_C   7 eeainyllrhpkvkkdkigllGiSkGgelalll 39 
                 + a +yl++++ +k+ +i ++G+S Gg + + l
  KHJ32889.1 154 QTAFTYLRKREDTKNYNIVVYGQSIGGAVSIQL 186
                 5799***********************988765 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.087
                 --SEEEEEEETT-SSS-HHHH CS
      BAAT_C 114 akgpillvvgedDknwpSkes 134
                 +k pil+++g +D+++p +++
  KHJ32889.1 240 SKVPILFLSGLKDEIVPPDHM 260
                 489************998776 PP

>> DUF818  Chlamydia CHLPS protein (DUF818)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.3e-05     0.018     166     236 ..     121     190 ..     102     195 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.3e-05
      DUF818 166 lakllganilvfnYPGvmsskGeitrenlakayqaCvrYLrDkeqGPkakeiiayGYsLGtlvqaeaLske 236
                 l +++g  + +  Y G   s+G+ +   l    q    YLr +e+  k  +i+ yG s+G+ v  + + k+
  KHJ32889.1 121 LVQRMGMSVFMLEYRGYGLSTGSPEETGLMLDAQTAFTYLRKREDT-KNYNIVVYGQSIGGAVSIQLVAKN 190
                 566788899999*****************************98875.7789**********9976655555 PP

>> LIDHydrolase  Lipid-droplet associated hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   5.7e-05     0.078       2     111 ..      98     200 ..      97     220 .. 0.82
   2 ?   -0.7   0.0       0.6   8.3e+02     222     252 ..     240     270 ..     225     275 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 5.7e-05
  LIDHydrolase   2 kilivlipGNPGlveFYetFlsllseklnpelevlgishaGfeleeeekeakenekvfsLedQiehkedflkellekaksekdvklilvGHSvGaYi 98 
                   k +++++ GN G ++   + ++ l ++  + ++v +  ++G+ l++ +     +e+   L+ Q  +   +l++    ++++k+ ++++ G S+G  +
    KHJ32889.1  98 KTIVLMFHGNAGNIGHRVPIAKILVQR--MGMSVFMLEYRGYGLSTGS----PEETGLMLDAQTAF--TYLRK----REDTKNYNIVVYGQSIGGAV 182
                   67899**********************..789**************99....88899999999876..45666....45789*************** PP

  LIDHydrolase  99 alevlkrlsers.....i 111
                   +++++ + ++++     i
    KHJ32889.1 183 SIQLVAKNQDDDhliglI 200
                   ****99888876554441 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.6
  LIDHydrolase 222 kekalvfyfgkkDhWvpeetrdelkellgee 252
                    + +++f+ g kD+ vp +++  l+e + ++
    KHJ32889.1 240 SKVPILFLSGLKDEIVPPDHMRRLFEICRST 270
                   3334999**************9999988765 PP

>> Peptidase_S15  X-Pro dipeptidyl-peptidase (S15 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0      0.01        14      55     124 ..     124     192 ..      75     203 .. 0.85
   2 ?    7.1   0.0    0.0027       3.7     212     257 ..     227     271 ..     225     282 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.01
                    HTT-EEEEEE-TTSTTS-S---TTTTTHHHHHHHHHHHHHHC.TTEEEEEEEEEECHHHHHHHHHCTT--T CS
  Peptidase_S15  55 arGYavVvqdvrGtggSeGeftvgdsdeaedgadvidWlakq.pwsnGkVgmtGiSYlGttqllaaatgvp 124
                    + G  v + + rG g S+G  +   +    d+  +   l+k  +  n ++ ++G S +G +++++ a++++
     KHJ32889.1 124 RMGMSVFMLEYRGYGLSTGSPEE--TGLMLDAQTAFTYLRKReDTKNYNIVVYGQSIGGAVSIQLVAKNQD 192
                    56777888899999999999988..7889999999999***99******************9999887654 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0027
                    SHHHHTT-HHHHHCT--S-EEEEEECCSSTTC.CHHHHHHHHHCCTT CS
  Peptidase_S15 212 dafWkdrnlsedadkvkapvllvgGwnDwnvk.ngaiklyealkapg 257
                    ++ W + ++    +  k+p+l+++G+ D++v  +++ +l+e  ++++
     KHJ32889.1 227 HQVWASEDYLP--SISKVPILFLSGLKDEIVPpDHMRRLFEICRSTK 271
                    67899999997..7889**************99***9**99988876 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   3.1e-05     0.043       2     128 ..     102     234 ..     100     288 .. 0.60

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.1e-05
                    EEE--GC......GCHHHHHHHHCCT..CEEEEE--TTSTS-GGCS--HHHCHHHHHHHCCTT......TTSEEEEEETCHHHHHHHHHHCC.... CS
  Abhydrolase_6   2 lllHGagss.assWlvapLaallaag..vhvlapDlpGhGrsdpppldledladlaalldelaa....gggpvvlvGHSlGGalalaaapla.... 86 
                    l+ HG  ++ ++    +p+a+ l ++    v+++ ++G+G s+++p +    +d   + + l++       ++v+ G S GGa++ ++++      
     KHJ32889.1 102 LMFHGNAGNiGH---RVPIAKILVQRmgMSVFMLEYRGYGLSTGSPEETGLMLDAQTAFTYLRKredtKNYNIVVYGQSIGGAVSIQLVAKNqddd 194
                    555773322111...23555555555664559*******9776666555555555333333333332477777************99665557766 PP

                    ..EE.EEES-..----TTTS----TTHHHHHHTT-CCCCHCCH CS
  Abhydrolase_6  87 lvvg.vlldppptalpagllaaalelllallallrllawlsre 128
                     ++g +l ++   +l ++ l + + +  +++all +  w s++
     KHJ32889.1 195 HLIGlILENT---FLSMRKLIPSIVPTSRFIALLCHQVWASED 234
                    4455344444...555555555555555555555555555444 PP

>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0    0.0018       2.5     103     161 ..     167     228 ..     153     301 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0018
                    -GGGEEEEEETHHHHHHHHHHHT-SS..--SEEEEES---TTGGGTTTTS-GGG.GG-EEEE CS
  Abhydrolase_2 103 pssriiigGFSqGaalalylaltlpk..klggivafsgalplsqklessatavt.kklpilq 161
                    ++ +i++ G S G+a++++l+ + +    l g +  + +l++++ ++s    +   +l  +q
     KHJ32889.1 167 KNYNIVVYGQSIGGAVSIQLVAKNQDddHLIGLILENTFLSMRKLIPSIVPTSRfIALLCHQ 228
                    56678888888888888888888877667888888888887777777533222223333344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2265.36
//
Query:       KHJ32890.1  [L=439]
Description: putative bar domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-63  212.8   9.0    6.5e-63  212.6   9.0    1.1  1  BAR       BAR domain
    2.7e-15   55.7   0.2    4.6e-15   55.0   0.2    1.4  1  SH3_1     SH3 domain
    1.4e-09   37.7   0.0    2.6e-09   36.8   0.0    1.5  1  SH3_9     Variant SH3 domain
    6.2e-08   32.2   0.0    1.8e-07   30.7   0.0    1.8  1  SH3_2     Variant SH3 domain
  ------ inclusion threshold ------
      0.041   14.0   0.0      0.092   12.8   0.0    1.6  1  SH3_10    SH3 domain
       0.14   11.9   0.2       0.27   10.9   0.2    1.4  1  CT_C_D    Carboxyltransferase domain, subdomain C and D
        1.8    7.9   4.6       0.56    9.6   1.4    1.7  2  DUF2220   Uncharacterized protein conserved in bacteria C-ter
        2.5    8.2  15.0       0.71   10.0   0.5    2.7  2  BRE1      BRE1 E3 ubiquitin ligase


Domain annotation for each model (and alignments):
>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.6   9.0   2.9e-66   6.5e-63       1     238 [.       6     246 ..       6     247 .. 0.98

  Alignments for each domain:
  == domain 1  score: 212.6 bits;  conditional E-value: 2.9e-66
         BAR   1 lkKafnRasqlleekvgkaekTkLDedFeelerrldvteklieklvkelkeylqanpgarakqivleklkeqplelLaesmieagkelgedss..fg.. 95 
                 ++K + Ra+q+l+ k++++e+Tk D+++ ++err++ +e++++kl++e+k+y++a++g++ +qi           ++++++ e++k+++++ s  ++  
  KHJ32890.1   6 FQKTLIRAPQSLKYKLNFGEQTK-DPVYIDAERRFQDLERETKKLHDESKKYFEAINGMMKHQI-----------EFSQAIAEIYKPISGRLSdpDSlv 92 
                 7999*******************.****************************************...........****************99665599 PP

         BAR  96 ........kalekygeavkklaqteeelekrvetnfldplrellekefkeiqkerkklehkrlDyDaakarlkklktkkskkakde...ekaeeelrkA 183
                         +a+e+y+ +vk+l   ++++ +++e ++++p +ell +++k i+k+  k++hk+lDyD+++a lkk+++kk+k++kde   +kae+el+ A
  KHJ32890.1  93 eagniqgiQACEEYETTVKDLLASLQPELEMIEIRIVRPANELL-DIIKAIRKTSVKRQHKQLDYDRHRAALKKIQDKKEKTLKDEqtlYKAENELDLA 190
                 99*******************9999*******************.****************************************************** PP

         BAR 184 qqkfeesneelkaeLpnllalevefv.nqlqafveaqldfhkqaaqlleqlqqqls 238
                 +q+++++n++lk+eLp+l++le ef+ + +q+f+++ql+++++++++++ +++ ++
  KHJ32890.1 191 TQEYNYYNDLLKMELPKLFELEREFIkPLFQSFYYMQLNIFYTLHEKMQGCDIGYF 246
                 ***************************************************99887 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.0   0.2     2e-18   4.6e-15       2      47 ..     386     431 ..     385     432 .. 0.97

  Alignments for each domain:
  == domain 1  score: 55.0 bits;  conditional E-value: 2e-18
                 ESSSBEXSSTTBXEBSTTEEEEEEEECSS..SEEEEEETTSTEEEEEE CS
       SH3_1   2 AlYDYeaeesdELsfkkGDviivleksed..gWwkgrlkgtgkeGliP 47 
                 AlYD+ea+ +++Lsfk G++i+v++++++  +Ww+g+lk  gk+G +P
  KHJ32890.1 386 ALYDFEAQIDGDLSFKAGEIIEVISRTDNenEWWTGKLK--GKQGQFP 431
                 9**************************999*********..69****9 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.8   0.0   1.2e-12   2.6e-09       1      47 [.     386     434 ..     386     436 .. 0.91

  Alignments for each domain:
  == domain 1  score: 36.8 bits;  conditional E-value: 1.2e-12
       SH3_9   1 AlypyepreddeLsLqrGDvitviee..sedgWlegsltGrtGlvPany 47 
                 Aly++e++ d  Ls+ +G++i vi++   e+ W+ g+l+G+ G +P  +
  KHJ32890.1 386 ALYDFEAQIDGDLSFKAGEIIEVISRtdNENEWWTGKLKGKQGQFPGII 434
                 8***********************883347****************875 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.0   7.9e-11   1.8e-07       4      50 ..     386     431 ..     375     436 .. 0.84

  Alignments for each domain:
  == domain 1  score: 30.7 bits;  conditional E-value: 7.9e-11
                 ESS-B-SCGCCB--B-TTEEEEEE..EEEECT.TEEEEEECCCEEEEE CS
       SH3_2   4 aiedyvgedkseLsfkkGdvikvlslgskdsd.gwwegevgGrvGlfP 50 
                 a+ d++++  + Lsfk+G++i v+  +++d++ +ww g  +G++G fP
  KHJ32890.1 386 ALYDFEAQIDGDLSFKAGEIIEVI--SRTDNEnEWWTGKLKGKQGQFP 431
                 455677777777************..888888899************9 PP

>> SH3_10  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   4.1e-05     0.092       5      62 ..     374     435 ..     370     436 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.1e-05
      SH3_10   5 RrskpgepiaveALcdykqa...evsiekgeevtLldnsdre.kWkVqtssGaemtvPgvcl 62 
                 R +   +p +v AL d++ +   + s++ ge + + + +d+e +W   + +G++ + Pg++l
  KHJ32890.1 374 RLNGSPKPETVLALYDFEAQidgDLSFKAGEIIEVISRTDNEnEWWTGKLKGKQGQFPGIIL 435
                 666778999********988888**************9998636****************98 PP

>> CT_C_D  Carboxyltransferase domain, subdomain C and D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   0.00012      0.27      35      86 ..     129     179 ..     104     207 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00012
                 HT..STTECEEEE-SSEEEEEESCCCCHHHHHH.HHHHHHHH.--------- CS
      CT_C_D  35 rakalpgvvelvpayrsllvefdpealdaaellaalkalleeaeeeaaeesr 86 
                  + + +++++++ a+r+  v+ + ++ld+++ +aalk++++++e++ ++e++
  KHJ32890.1 129 VR-PANELLDIIKAIRKTSVKRQHKQLDYDRHRAALKKIQDKKEKTLKDEQT 179
                 44.68899*********************************99988888875 PP

>> DUF2220  Uncharacterized protein conserved in bacteria C-term(DUF2220)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1      0.97   2.2e+03     137     162 ..      42      66 ..      32      72 .. 0.62
   2 ?    9.6   1.4   0.00025      0.56     128     172 ..     169     217 ..     138     222 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.97
     DUF2220 137 iarelprLteaeaklyedlledelke 162
                   re+++L+++ +k +e++   ++k+
  KHJ32890.1  42 LERETKKLHDESKKYFEAING-MMKH 66 
                 445566688888888877655.4444 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00025
     DUF2220 128 gvadee...saeiarelpr.LteaeaklyedlledelkerlRLEQErip 172
                 + ++++   ++ +++e++  L ++e++ y+dll++el +   LE E i+
  KHJ32890.1 169 KKEKTLkdeQTLYKAENELdLATQEYNYYNDLLKMELPKLFELEREFIK 217
                 333333211334445567789*************************994 PP

>> BRE1  BRE1 E3 ubiquitin ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.5   0.00032      0.71      41      91 ..      26      76 ..       8      79 .. 0.84
   2 ?    1.5   8.2      0.14   3.1e+02      10      64 ..     140     194 ..     132     217 .. 0.54

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00032
        BRE1 41 akadqkyfaamrskdalenelkkLnkllsKsselieqLkelekefvrklke 91
                +  d  y +a+r  ++le e kkL    +K  e i+ +   + ef + ++e
  KHJ32890.1 26 QTKDPVYIDAERRFQDLERETKKLHDESKKYFEAINGMMKHQIEFSQAIAE 76
                5567779*****************************999999999998877 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.14
        BRE1  10 kafeelseqlskkvkeltileekklrleaekakadqkyfaamrskdalenelkkL 64 
                 ka++++s + + k+ ++ ++   +++++ +k+k  +    + ++ + l+   +  
  KHJ32890.1 140 KAIRKTSVKRQHKQLDYDRHRAALKKIQDKKEKTLKDEQTLYKAENELDLATQEY 194
                 5555555555555555555555555555555554444444444443333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1075  (0.0599587); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 3183.31
//
Query:       KHJ32891.1  [L=348]
Description: putative inositol-pentakisphosphate 2-kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.4e-46  156.9   0.1    1.3e-45  156.3   0.1    1.3  1  Ins_P5_2-kin  Inositol-pentakisphosphate 2-kinase


Domain annotation for each model (and alignments):
>> Ins_P5_2-kin  Inositol-pentakisphosphate 2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.3   0.1   7.2e-50   1.3e-45       1     331 [.      15     320 ..      15     321 .. 0.84

  Alignments for each domain:
  == domain 1  score: 156.3 bits;  conditional E-value: 7.2e-50
                   EEEE-SSEEEEEE-S..S-TTTTTE..........................EEEEEEEESTSHHHHT-SSHHHHHHHHHHHTTHHHHTSTSB---EE CS
  Ins_P5_2-kin   1 YlgEGaaniVfsytg..sspsalgk..........................vLRlrKapksekdseskaeseeeslsfvrkvispllgseylvdqel 69 
                   Yl+EGaaniV+ ++   +s+    +                          +LRlrK+ +        + +   s+s++ + i+pl+ ++ +v+q+l
    KHJ32891.1  15 YLNEGAANIVYNICFmpESD----NpgkeitlsskinslalkaeksiyankLLRLRKNLP-------TTCQVCISHSHWLNHIAPLFCPDEIVQQSL 100
                   9************8743222....123468899***************************.......455555555566689*************** PP

                   EEE.-HHHHHHHHHHH...........GGGS-HHHHHHEEE-TT-SEEEEEE-TTSSSSSTS-EEEEEE-----S..---STTS-GGGGGGGTS-HH CS
  Ins_P5_2-kin  70 vrl.drefleelnekl...........eaerpaaRrrkaevdvakecallleDltllpgsksktitvEiKPKwGflqspsaplsaetkeikkrvcrf 154
                   v + ++ +++ ln++l            +erp++Rr      +++e++ll++D+t++++    ti +E+KPKw ++qs sap+++       ++cr 
    KHJ32891.1 101 VAIkSSGIISCLNAELreweqsaqrlgIKERPENRRGT--YLADEEFGLLVTDMTPQTN----TILIEFKPKW-LTQSLSAPSNS-------TRCRQ 183
                   **846677888888887777766555455588888888..556667*********9988....8*********.********999.......***** PP

                   HHHHHHHHHTTSSSS.....--S--HHHHTSS-HHHHHHHHHHHHHS-TTTEEEEETTEEHHHHHHHHHHHHHTHHHHHHHHHTT-SSHHHHHHHHH CS
  Ins_P5_2-kin 155 cahqalklkegkiee.....iskycPldLfsgdearvrraleallktpqNnlkvflngklkfvellleaLlessvLerLlqlQkldrlDiegllkly 246
                   ca++a+  ++ k  e     +  ycPldL s+d++ + +   +ll  p +          + v+ ++++++ s++L+rL++lQ   r+D  g l l 
    KHJ32891.1 184 CALRAYVNSDSKNLEellpsPRVYCPLDLLSSDQKVIYHLALSLLPPPVE---------QEYVKRFVDWIQSSTLLHRLRELQ--IRFDRTGTLDLD 269
                   *******666666556888888***********************64433.........289*********************..89**88888555 PP

                   H.HHHH.....HHHTS-HHHHHHHHHHHHHHHHHHH-EEEEEESS--SEEEEETTTTEEEEEEEEEE------TTHHHHHHHHHH CS
  Ins_P5_2-kin 247 kkeeekkeessleesesleealelldkyllaatlkDCSimirlsssaesrelsqsrgrafsyevkviDLDpKsakklekwvkldr 331
                                          + +++l+a+t++DC++++r+            + +  ++e++++DLD+Ks +k+++w + ++
    KHJ32891.1 270 ----------------------PFDQNFLIAMTIRDCTVFLRI------------SRSGEKVEARIGDLDLKSTAKISYWKQVEN 320
                   ......................47789****************............6666789*******************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       383  (0.021362); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2564.29
//
Query:       KHJ32892.1  [L=475]
Description: putative nucleoside transporter family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.4e-41  141.0  17.0    5.7e-39  134.3  17.0    3.1  1  Nucleoside_tran  Nucleoside transporter


Domain annotation for each model (and alignments):
>> Nucleoside_tran  Nucleoside transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.3  17.0   3.2e-43   5.7e-39       2     306 ..     168     469 ..     167     471 .. 0.81

  Alignments for each domain:
  == domain 1  score: 134.3 bits;  conditional E-value: 3.2e-43
  Nucleoside_tran   2 akvvlinsfnallqnslfglagelps.eYtqavliGqalaGvlvslvmilavasnse.................lkesallYFivsivvvivcv 77 
                      ++v + + +++l qn+ f+ a  ++  eY+qa++ Gq++aGvl+sl++i++v++ ++                  +  al YFi+++ ++iv++
       KHJ32892.1 168 ITVFFTSIGTGLCQNGTFAFATSIGRpEYIQAIVTGQGIAGVLPSLAQIVSVLAIPDpdesatafekariiakgSSSAALSYFITATFISIVTF 261
                      67889999****************9769***********************9999986677788888777776666677788888888888876 PP

  Nucleoside_tran  78 illlvlkklefykeykqlklegslletkeelrqekeeeseskvkltaekskegeenvfvllkvilakikvlalsvvlvftvtlsvfpavtaevk 171
                      +     +  + ++++ q            +l  + ++++e   + t        + ++v++ v+ +k+  la s++l    t   fp++ta ++
       KHJ32892.1 262 V-----TSIPLIRKHSQIP--------SYNLMDSSRNSQET--QKT--------KRQVVSMRVLYKKLGWLAASIFLCL-ATSMFFPVFTARIV 331
                      6.....4556677777777........44455555555432..222........23456789**************999.888899******** PP

  Nucleoside_tran 172 ssilpt......keeyfipvllfllfNlfdllGrvla..avimwpdqdsrllvvlvllRllfiplfllcnakpqsralpvlfesdllf.illml 256
                      s +  +       +  fip l fl +N++dl Gr+ +   + +w+   +r l++ v+lR++fipl++lcn       +   ++sd+++ i++ +
       KHJ32892.1 332 SVVPEDkaplilHNTVFIP-LGFLCWNMGDLAGRLTTlsPIRKWR-IKQRSLFFFVCLRFVFIPLYFLCNLG----GHGAKINSDIFYlIIVSF 419
                      9976552222323333333.569***********87621456788.799**********************9....5788999**988356789 PP

  Nucleoside_tran 257 lfalsnGYlasllmmlaPkkvkpkeketAgaltsfflvlGLalGavlsfl 306
                       f+++nG l+sl++m a k v+ +e+e+ g ++++ l+ GL +G++lsf 
       KHJ32892.1 420 GFGFTNGILSSLCLMNAGKYVDLEEREATGGFMVMNLLAGLTVGSLLSFA 469
                      9***********************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (475 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       734  (0.0409393); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 3613.54
//
Query:       KHJ32893.1  [L=222]
Description: putative riboflavin kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.6e-33  114.2   0.0    4.4e-33  113.9   0.0    1.1  1  Flavokinase  Riboflavin kinase


Domain annotation for each model (and alignments):
>> Flavokinase  Riboflavin kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.9   0.0   2.4e-37   4.4e-33       3     111 .]      29     197 ..      27     197 .. 0.94

  Alignments for each domain:
  == domain 1  score: 113.9 bits;  conditional E-value: 2.4e-37
                  S-EEEEEEEES-SSCH.TTTT--EEEEE-.S-B-G......TSEEEEEEEE............................................... CS
  Flavokinase   3 rpyslsgkVvkGkkrG.relgfpTaNlel.ekllp......kkGVYavrvk............................................... 45 
                  +p++l g+V +G++rG  +lg+pTaNl++ +  ++      k+GVY+++++                                               
   KHJ32893.1  29 FPLRLAGEVLRGFGRGsSKLGCPTANLPVdSASAKpwidsaKSGVYFGWCSirfppshlalkstvstplsrilppdfvppvagiqlsieslqngwrly 126
                  6899************************95333325888999******************************************************** PP

                  .EEEEEEEETTTSSE...EEEEET.T--S--TTSEEEEEEEEEEEE----SSHHHHHHHHHHHHHHHHHHH CS
  Flavokinase  46 .gvaniGvrptfknk...vEvhil.dfsedlygkelrvellkflRpekkFdsleaLkaqikkDvekarell 111
                   +v++iG++p+fkn+   +Evh+l  f ed+yg ++rv ll+f+R+e +++s+e+L+++i  D+e+ar++l
   KHJ32893.1 127 pMVISIGYNPFFKNTtrsAEVHVLaGFCEDFYGCQMRVCLLGFIRDEWDYESMEKLIEDIGIDCEVARRSL 197
                  **************77899*****45899***************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       198  (0.0110436); expected 358.6 (0.02)
Passed bias filter:                      191  (0.0106531); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1632.13
//
Query:       KHJ32894.1  [L=141]
Description: putative gtp-binding protein ypt1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-41  139.8   0.3    6.8e-41  139.6   0.3    1.1  1  Ras       Ras family
    3.2e-17   62.9   0.6    5.4e-17   62.1   0.1    1.6  2  Roc       Ras of Complex, Roc, domain of DAPkinase
    1.9e-08   34.0   0.1    2.1e-08   33.8   0.1    1.2  1  Arf       ADP-ribosylation factor family


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.6   0.3   1.1e-44   6.8e-41      52     161 ..       1     110 [.       1     111 [. 0.99

  Alignments for each domain:
  == domain 1  score: 139.6 bits;  conditional E-value: 1.1e-44
                 EEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHHHSTTTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHH CS
         Ras  52 iwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikrvaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenve 150
                 +wDTAGqe+f++++++yyr+a+gi +vyd+t+ +sf+nvk+w++ei r+a+e v+ +LvGnK+D+++k++v+++ ++e+a++lg++fletSAk+++nve
  KHJ32894.1   1 MWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDISDKKVVEYTVAKEFADSLGIPFLETSAKNANNVE 99 
                 6************************************************************************************************** PP

                 HHHHHHHHHHH CS
         Ras 151 eafeellreil 161
                 +af +++r+i+
  KHJ32894.1 100 QAFLTMARQIK 110
                 ********997 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   0.1   9.1e-21   5.4e-17      60     119 ..       1      64 [.       1      65 [. 0.90
   2 ?   -1.5   0.0      0.48   2.9e+03      29      48 ..      80      99 ..      68     125 .. 0.58

  Alignments for each domain:
  == domain 1  score: 62.1 bits;  conditional E-value: 9.1e-21
                 EEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHHHHHHHHHHHCSSS.-EEEEEE-TT CS
         Roc  60 iWDtaGqerfrslhplylreaalailvyd...srssenlkeWlkelkkvagks.pvilvgnkiD 119
                 +WDtaGqerfr+++++y+r+a+ +++vyd    +s++n+k+Wl+e++++a++  + +lvgnk D
  KHJ32894.1   1 MWDTAGQERFRTITSSYYRGAHGICVVYDvtdMDSFNNVKQWLQEIDRYATEGvNKLLVGNKSD 64 
                 6***************************965455789************9986478******99 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.48
                ETTTTEEEEEEECGGSGGCT CS
         Roc 29 kstigvdfltkevtkikgve 48
                   +g+ fl++++++ ++ve
  KHJ32894.1 80 ADSLGIPFLETSAKNANNVE 99
                55555555555444333332 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.1   3.5e-12   2.1e-08      62     132 ..       1      70 [.       1     118 [. 0.81

  Alignments for each domain:
  == domain 1  score: 33.8 bits;  conditional E-value: 3.5e-12
                 EEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHCTSGCCTTSEEEEEEE-TTSTTSS- CS
         Arf  62 vwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpeals 132
                 +wD  Gqe+ R + ++Y++  +++  v D++d + +++ k+ L+++ ++   + v  l+++NK D+++   
  KHJ32894.1   1 MWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEI-DRYATEGVNKLLVGNKSDISDKKV 70 
                 7*******************************************97.6778899***********987543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1071.81
//
Query:       KHJ32895.1  [L=482]
Description: putative protein phosphatase pp2a regulatory subunit b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-13   50.7   4.8       0.12   13.3   0.3    7.1  7  WD40      WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0017        31      13      36 ..      32      55 ..      11      57 .. 0.78
   2 !    7.0   0.0   0.00065        12      22      38 .]     104     119 ..      70     119 .. 0.75
   3 !   12.5   0.1   1.2e-05      0.21       9      38 .]     185     214 ..     177     214 .. 0.81
   4 ?    2.8   0.0     0.014   2.5e+02      14      36 ..     247     263 ..     232     265 .. 0.69
   5 !   13.3   0.3   6.7e-06      0.12      11      38 .]     296     322 ..     287     322 .. 0.89
   6 !    3.7   0.0    0.0074   1.3e+02      16      37 ..     358     379 ..     328     379 .. 0.86
   7 ?   -1.1   0.0      0.24   4.3e+03      10      26 ..     453     469 ..     449     475 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0017
                EEEEEEETTSSEEEEEETTSEEEE CS
        WD40 13 vtslafspdgawlasGsdDgtvri 36
                ++ + f+  g++la+G++ g v +
  KHJ32895.1 32 ISTVEFDYTGNYLATGDKGGRVVL 55
                57788***********98777766 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.00065
                 SSEEEEEETTSEEEEEE CS
        WD40  22 gawlasGsdDgtvriWd 38 
                 +++l+s   D+t+++W+
  KHJ32895.1 104 SHYLLSTN-DKTIKLWK 119
                 44588666.*******6 PP

  == domain 3  score: 12.5 bits;  conditional E-value: 1.2e-05
                 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +H  +++s+++++dg  ++s sdD  + +W+
  KHJ32895.1 185 AHaYHINSISVNSDGETFIS-SDDLRINLWN 214
                 78666*************96.66*******8 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.014
                 EEEEEETTSSEEE.EEETTSEEEE CS
        WD40  14 tslafspdgawla.sGsdDgtvri 36 
                 +s+      +w++ ++s +gt+++
  KHJ32895.1 247 HSC------NWFMfASS-KGTIKL 263
                 344......67543789.****98 PP

  == domain 5  score: 13.3 bits;  conditional E-value: 6.7e-06
                 SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriWd 38 
                 ss+++++fs+dg++++ + d  tv+iWd
  KHJ32895.1 296 SSISDVRFSHDGRYIL-SRDYLTVKIWD 322
                 4699999*********.799*******9 PP

  == domain 6  score: 3.7 bits;  conditional E-value: 0.0074
                 EEEETTSSEEEEEETTSEEEEE CS
        WD40  16 lafspdgawlasGsdDgtvriW 37 
                 + fs dg+ +++Gs++++ +i+
  KHJ32895.1 358 VVFSGDGRNVMTGSYNNNFMIY 379
                 459***********99998886 PP

  == domain 7  score: -1.1 bits;  conditional E-value: 0.24
                 SSSEEEEEEETTSSEEE CS
        WD40  10 Hssvtslafspdgawla 26 
                 H+ + +++++p  + +a
  KHJ32895.1 453 HKKILHMSWHPFEDSIA 469
                 87799999**9988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 3824.51
//
Query:       KHJ32896.1  [L=432]
Description: putative aaa-type atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.3e-42  143.1   0.0    1.1e-41  142.3   0.0    1.4  1  AAA              ATPase family associated with various cellul
    2.1e-30  104.5   0.1    6.9e-30  102.8   0.1    2.0  1  Vps4_C           Vps4 C terminal oligomerisation domain
    2.3e-21   75.6   7.6    5.1e-21   74.5   7.6    1.6  1  MIT              MIT (microtubule interacting and transport) 
    2.2e-05   24.9   0.0     0.0011   19.3   0.0    2.3  2  AAA_16           AAA ATPase domain
    2.3e-05   24.4   0.0    0.00011   22.2   0.0    2.2  1  AAA_5            AAA domain (dynein-related subfamily)
    2.4e-05   24.1   0.0      5e-05   23.1   0.0    1.6  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    5.1e-05   23.1   0.0    0.00014   21.6   0.0    1.8  2  IstB_IS21        IstB-like ATP binding protein
    5.4e-05   22.6   0.0    0.00011   21.5   0.0    1.5  1  TIP49            TIP49 P-loop domain
     0.0001   22.7   0.0      0.011   16.1   0.0    2.5  2  RNA_helicase     RNA helicase
    0.00017   21.9   0.1     0.0099   16.1   0.1    2.5  1  AAA_22           AAA domain
    0.00019   21.2   0.0     0.0016   18.2   0.0    2.4  2  AAA_lid_3        AAA+ lid domain
    0.00037   20.6   0.0      0.012   15.7   0.0    2.5  2  AAA_2            AAA domain (Cdc48 subfamily)
    0.00061   19.8   0.0     0.0014   18.7   0.0    1.5  1  AAA_14           AAA domain
    0.00067   20.2   0.1     0.0024   18.4   0.0    1.9  1  AAA_18           AAA domain
     0.0012   18.1   0.0      0.003   16.8   0.0    1.7  1  DUF815           Protein of unknown function (DUF815)
     0.0025   18.0   0.0     0.0058   16.8   0.0    1.7  1  AAA_33           AAA domain
     0.0054   16.5   0.0      0.011   15.5   0.0    1.5  1  AAA_24           AAA domain
  ------ inclusion threshold ------
       0.01   15.4   0.1       0.67    9.5   0.1    2.3  2  AAA_25           AAA domain
      0.016   15.6   0.0       0.04   14.3   0.0    1.7  1  AAA_17           AAA domain
      0.028   13.8   0.0      0.081   12.3   0.0    1.7  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.035   13.6   0.0       0.18   11.3   0.0    2.1  2  AAA_7            P-loop containing dynein motor region
      0.041   13.6   0.2       0.52   10.0   0.1    2.3  2  Cytidylate_kin   Cytidylate kinase
      0.048   13.8   0.0       0.09   12.9   0.0    1.4  1  Torsin           Torsin
      0.058   12.8   0.6         11    5.4   0.1    3.0  3  SMC_N            RecF/RecN/SMC N terminal domain
       0.06   13.5   2.7       0.12   12.6   2.7    1.5  1  USP8_dimer       USP8 dimerisation domain
      0.061   13.1   0.8        1.3    8.8   0.0    2.5  2  AAA_29           P-loop containing region of AAA domain
      0.064   12.3   0.0        0.1   11.6   0.0    1.2  1  Parvo_NS1        Parvovirus non-structural protein NS1
      0.073   12.5   0.1       0.16   11.4   0.1    1.5  1  PhoH             PhoH-like protein
       0.13   11.6   0.1        1.5    8.0   0.0    2.4  2  Zeta_toxin       Zeta toxin
       0.14   12.1   0.0       0.63    9.9   0.0    2.0  2  NACHT            NACHT domain
       0.18   11.5   0.0       0.47   10.1   0.0    1.7  1  Sigma54_activat  Sigma-54 interaction domain
       0.22   11.4   0.9        1.3    8.9   0.0    2.3  3  ATPase_2         ATPase domain predominantly from Archaea
       0.32   11.5   3.2        2.5    8.6   0.0    3.0  3  ABC_tran         ABC transporter


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.3   0.0   2.1e-44   1.1e-41       1     131 [.     166     294 ..     166     295 .. 0.98

  Alignments for each domain:
  == domain 1  score: 142.3 bits;  conditional E-value: 2.1e-44
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 +llyGppGtGK++lakava+e++++f+++s s+l+sk++gese+ +++lf+ a+e++ psi+fiDE+dal++ r ++ese ++r+  ++l ++dgv ++
  KHJ32896.1 166 ILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFAMARENR-PSIIFIDEVDALCGPRGEGESEASRRIKTEMLVQMDGVGRD 263
                 69******************************************************8.****************999********************** PP

                 SSTEEEEEEESSGGGSTHHHHSTTSSEEEETT CS
         AAA 100 eskvivigatnrpdkldpallrgRfdrkieie 131
                 ++ v+v+gatn p++ld a++ +Rf+r+++i+
  KHJ32896.1 264 SKGVLVLGATNIPWQLDAAIR-RRFQRRVHIS 294
                 99*******************.7*****9986 PP

>> Vps4_C  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.8   0.1   1.3e-32   6.9e-30       1      61 []     368     428 ..     368     428 .. 0.99

  Alignments for each domain:
  == domain 1  score: 102.8 bits;  conditional E-value: 1.3e-32
      Vps4_C   1 ltPCspgdpgaiemtwmdipsdkllePpvtlkDflkalkkarptVskeDLekheeFTkefG 61 
                 ltPCspgd gaiemtw+++++dkllePp++lkDf+ka+k arptVs+eD+++ ee+TkefG
  KHJ32896.1 368 LTPCSPGDVGAIEMTWTEVDADKLLEPPLQLKDFIKAVKGARPTVSQEDIKRSEEWTKEFG 428
                 7***********************************************************9 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.5   7.6   9.4e-24   5.1e-21       1      65 []       7      72 ..       7      72 .. 0.97

  Alignments for each domain:
  == domain 1  score: 74.5 bits;  conditional E-value: 9.4e-24
         MIT  1 ldkAlelvkkAveeDnagnyeeAlelYkealelLlqalk.ekneerrellrekieeYleRaeeLke 65
                l +A+e+vkkA+e+D a +ye+A++lY ++lel+++alk ekn++ +e++r+k+ eYleRae+Lk+
  KHJ32896.1  7 LGRAIEIVKKAIEADIATEYEKAYQLYYQSLELFMLALKwEKNAKAKEMIRAKVGEYLERAEKLKN 72
                568************************************88***********************97 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   2.1e-06    0.0011      23      51 ..     161     190 ..     155     217 .. 0.80
   2 ?    3.2   0.0      0.19     1e+02     122     146 ..     210     233 ..     206     270 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 2.1e-06
      AAA_16  23 rp.elvllsGesGvGKsslvrellralekd 51 
                 +p   +ll+G++G+GKs l+++++++++ +
  KHJ32896.1 161 QPwKGILLYGPPGTGKSYLAKAVATEANST 190
                 567899******************988866 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.19
      AAA_16 122 llkrllallsrderplvlvlDdlqw 146
                 l+k+l+a +++  rp ++++D+++ 
  KHJ32896.1 210 LVKQLFAMARE-NRPSIIFIDEVDA 233
                 45666777777.999*******994 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   2.1e-07   0.00011       2      76 ..     166     233 ..     165     287 .. 0.83

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 2.1e-07
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEver 76 
                 +lL GppGtgKs la+ +a   n++++ v      +++dl+ ++   ++ ++lv++ +   ar  +++i+++DEv+ 
  KHJ32896.1 166 ILLYGPPGTGKSYLAKAVATEANSTFFSV------SSSDLVSKWM--GESERLVKQLFA-MARenRPSIIFIDEVDA 233
                 89*****************9999999976......6889*****9..566666666665.444479*********95 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   9.1e-08     5e-05      31      97 ..     161     235 ..     138     293 .. 0.72

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 9.1e-08
      RuvB_N  31 ealdhvllyGpPGlGkttlakiiakelgvkl.kitsgPvlek....agdlaalltnleek...dvlfideihrls 97 
                 ++   +llyGpPG Gk+ lak +a+e ++++  ++s+  ++k    +  l+  l  + ++    ++fide+  l 
  KHJ32896.1 161 QPWKGILLYGPPGTGKSYLAKAVATEANSTFfSVSSSDLVSKwmgeSERLVKQLFAMAREnrpSIIFIDEVDALC 235
                 556679*********************99872455566666532223456666655544312269*****98876 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       9.7   5.3e+03      67      87 ..      13      33 ..      10      57 .. 0.65
   2 !   21.6   0.0   2.6e-07   0.00014      49     116 ..     165     230 ..     156     243 .. 0.70

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 9.7
   IstB_IS21 67 lgveavraglsvlfvrvedLv 87
                + ++a++a++++ + ++ +L 
  KHJ32896.1 13 IVKKAIEADIATEYEKAYQLY 33
                667888888888888777774 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 2.6e-07
   IstB_IS21  49 nivllGpsGvGKshlaialgveavraglsvlfvrvedLveelkra.rrdgklaralkrllkvdllilDd 116
                 +i+l Gp+G+GKs+la a+++ea  + +sv   + +dLv++   + +r  k   a++r  +++++ +D+
  KHJ32896.1 165 GILLYGPPGTGKSYLAKAVATEANSTFFSV---SSSDLVSKWMGEsERLVKQLFAMARENRPSIIFIDE 230
                 799****************99987666655...566777664433023333344455556666666666 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   2.1e-07   0.00011      21     103 ..     130     214 ..     109     220 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 2.1e-07
                 XXXXXXXXXXXXXXXXXXX.X...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  21 keeeglvGqkkareaagvi.v...elikekklaGravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkktevltqal 103
                 ++  gl G k+a + a ++ +   +l   k+   +++Ll Gp+gtGk+ la a++ e +    f ++s+s++ s  +  +e l+++l
  KHJ32896.1 130 EDVAGLEGAKEALKEAVILpIkfpHLFTGKRQPWKGILLYGPPGTGKSYLAKAVATEAN--STFFSVSSSDLVSKWMGESERLVKQL 214
                 5556777777775555443232225778888889**********************987..67999**************9998765 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0     2e-05     0.011       1      26 [.     166     191 ..     166     227 .. 0.78
   2 ?    4.0   0.0      0.12        64       3      26 ..     234     257 ..     233     275 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2e-05
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   i+lyGp+g+GKS+lak +a++  +++
    KHJ32896.1 166 ILLYGPPGTGKSYLAKAVATEANSTF 191
                   789**************888777655 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.12
  RNA_helicase   3 lyGpsgeGKStlakeLakallkkl 26 
                   l+Gp+geG S +++++ +++l ++
    KHJ32896.1 234 LCGPRGEGESEASRRIKTEMLVQM 257
                   79*************999999776 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.1   1.8e-05    0.0099       8      41 ..     166     190 ..     163     275 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.8e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpe 41 
                 ++++G++GtGK++l++ ++ +++         ++
  KHJ32896.1 166 ILLYGPPGTGKSYLAKAVATEAN---------ST 190
                 799****************9984.........33 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0     3e-06    0.0016       3      33 ..     320     350 ..     320     367 .. 0.88
   2 ?   -0.8   0.0       2.6   1.4e+03      28      44 ..     402     418 ..     401     419 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 3e-06
   AAA_lid_3   3 dlkeLAerTeGySGADlaalcreAallAlrr 33 
                 d+ +L +++eGySG D+   ++ A +  +r 
  KHJ32896.1 320 DFRKLGALSEGYSGSDITIAVQDALMQPVRK 350
                 78899*********************99986 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 2.6
   AAA_lid_3  28 llAlrrgikeitmedfe 44 
                 + A++  ++++++ed++
  KHJ32896.1 402 IKAVKGARPTVSQEDIK 418
                 57999999*******97 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0       0.3   1.6e+02      30      68 ..      50      91 ..      19     124 .. 0.75
   2 !   15.7   0.0   2.3e-05     0.012       6      92 ..     166     247 ..     161     267 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.3
                ....-EEEEEGGG---.----THHHHHHHHHT..TT-HHHHT CS
       AAA_2 30 kkekkliradaselle.eeevehlvsrligap..pgyvgaee 68
                 k k++ira   e+le +e++++ +s+  g++  pg++ga+ 
  KHJ32896.1 50 AKAKEMIRAKVGEYLErAEKLKNHLSEIDGKRkvPGIIGANG 91
                6889************88999999999988752255666555 PP

  == domain 2  score: 15.7 bits;  conditional E-value: 2.3e-05
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG---..----THHHHHHHHHTTT-HHHHTTSEEEEETGGG----.--------- CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegGivllDEidKihpk.essgadvSr 92 
                 ill gp g+Gk++laka+a   +     ++  +  s+l      e+e+lv++l     ++ + +   i+++DE+d  +   ++ +++ Sr
  KHJ32896.1 166 ILLYGPPGTGKSYLAKAVATEANS----TFFSVSSSDLVSkwMGESERLVKQLF----AMARENRPSIIFIDEVDALCGPrGEGESEASR 247
                 899*******************93....66666666666623346666666665....444555567********998765555556655 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   2.5e-06    0.0014       5      75 ..     166     233 ..     163     255 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 2.5e-06
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqe 75 
                 +++ G+  +GK++l+k ++ e     + ++ ++  d   k + ++e+l + ++++++e++ +++f+DE+  
  KHJ32896.1 166 ILLYGPPGTGKSYLAKAVATEAN---STFFSVSSSDLVSKWMGESERLVKQLFAMARENRPSIIFIDEVDA 233
                 7899**************98888...88888988888888888888888888887666799*******976 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   4.4e-06    0.0024       1      40 [.     166     208 ..     166     235 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 4.4e-06
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf...gvnlrdvakengllle 40 
                 Ill G+pG+GK+ lak+++ + ++   +v ++d++++ + + e
  KHJ32896.1 166 ILLYGPPGTGKSYLAKAVATEANStffSVSSSDLVSKWMGESE 208
                 99****************9997668898888888877555444 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   5.5e-06     0.003      26     115 ..     128     230 ..     110     251 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 5.5e-06
      DUF815  26 klddLvgidkqkealvente......qfl..eglpannvLLwGarGtGKSslvkallneyaeeg..Lrlievekedlkelpklvellr...erperfil 111
                 k++d+ g++  keal+e +       ++   + +p + +LL+G  GtGKS l ka+ +e++++   +   ++  + + e ++lv++l    ++++  i+
  KHJ32896.1 128 KWEDVAGLEGAKEALKEAVIlpikfpHLFtgKRQPWKGILLYGPPGTGKSYLAKAVATEANSTFfsVSSSDLVSKWMGESERLVKQLFamaRENRPSII 226
                 55666666666666665543111111222113467789*********************9999833333455556666666666665422255666788 PP

      DUF815 112 fvDD 115
                 f+D 
  KHJ32896.1 227 FIDE 230
                 8876 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   1.1e-05    0.0058       2      39 ..     166     205 ..     166     256 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.1e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfg 39 
                 +ll G+pG+GKs+la+ ++ +    ++ +ss +l ++  g
  KHJ32896.1 166 ILLYGPPGTGKSYLAKAVATEANstFFSVSSSDLVSKWMG 205
                 6789**************9888888888888886555444 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0     2e-05     0.011       5      30 ..     166     193 ..     164     247 .. 0.64

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2e-05
      AAA_24   5 iliyGpsgiGKTtlakel..gpkplfid 30 
                 il+yGp+g+GK++lak    + +  f+ 
  KHJ32896.1 166 ILLYGPPGTGKSYLAKAVatEANSTFFS 193
                 89**************996644444444 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1    0.0012      0.67      36      54 ..     166     184 ..     155     190 .. 0.88
   2 ?    3.5   0.0     0.083        45     128     167 ..     209     247 ..     190     273 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0012
      AAA_25  36 allaGapgtGKttlaldla 54 
                 +ll+G+pgtGK+ la  +a
  KHJ32896.1 166 ILLYGPPGTGKSYLAKAVA 184
                 69************97766 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.083
      AAA_25 128 advdaleaaieevegvrlvviDplsralggdensnsdvga 167
                 + v++l a ++e +++  + iD +++++g   + +s++++
  KHJ32896.1 209 RLVKQLFAMARE-NRPSIIFIDEVDALCGPRGEGESEASR 247
                 567889999999.88**************95555555422 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   7.4e-05      0.04       1      42 [.     169     213 ..     169     233 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 7.4e-05
                 EE-TTSSHHHHHHHHHHHHTEEEE..EHHHHHHHHHHTTT.SHSS CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthl..saGdllreeakrgg.laka 42 
                 +G+PG GK+ +++ ++ + + t++  s +dl+ + + +++ l+k+
  KHJ32896.1 169 YGPPGTGKSYLAKAVATEANSTFFsvSSSDLVSKWMGESErLVKQ 213
                 7*****************988876116688888877666523554 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00015     0.081      25      43 ..     166     184 ..     162     194 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00015
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +ll+GppG+GK+ lak+++
    KHJ32896.1 166 ILLYGPPGTGKSYLAKAVA 184
                   89*************9976 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00033      0.18      34      64 ..     164     194 ..     154     234 .. 0.72
   2 ?   -1.5   0.0       2.9   1.6e+03     149     175 ..     267     293 ..     263     295 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00033
       AAA_7  34 kpvllvGptGtGKtviikdllkkldkekyls 64 
                 k +ll+Gp GtGK+ ++k + ++ +++ +++
  KHJ32896.1 164 KGILLYGPPGTGKSYLAKAVATEANSTFFSV 194
                 569***************9998888443333 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 2.9
       AAA_7 149 vqlvaamgppgggrneitpRllrhfnv 175
                 v +++a + p +    i  R++r++++
  KHJ32896.1 267 VLVLGATNIPWQLDAAIRRRFQRRVHI 293
                 778999999999999********9875 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.1   0.00095      0.52       3      29 ..     168     194 ..     166     198 .. 0.88
   2 ?    1.0   0.0      0.55     3e+02     119     148 ..     261     291 ..     234     296 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00095
                     EE-STTSSHHHHHHHHHHHHT-EEEEH CS
  Cytidylate_kin   3 iDGPagsGKssvaralaeklglkyldt 29 
                     + GP g+GKs +a+a+a++ + ++++ 
      KHJ32896.1 168 LYGPPGTGKSYLAKAVATEANSTFFSV 194
                     67******************9999875 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.55
                     ESSI.IIIISTT-SEEEEEE--HHHHHHHHH CS
  Cytidylate_kin 119 GRDi.gtvvfpdaelKifldAsveeRakRRl 148
                     GRD  g  v+  +++   ldA ++ R +RR+
      KHJ32896.1 261 GRDSkGVLVLGATNIPWQLDAAIRRRFQRRV 291
                     788625557778889999***********97 PP

>> Torsin  Torsin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00017      0.09      44      93 ..     154     206 ..     132     213 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00017
                 HHT-SS-SS-EEEEEEE-TTSSHHHHHHHHH...HHHSTTGGGSTTEEEEEHH CS
      Torsin  44 ylenekpkkpLvlsfhGwtGtGknfvaeiia...enlyrdGlrsdyvkkfvat 93 
                 +l + k +    + ++G +GtGk+++a+ +a   + ++ + + sd v k+++ 
  KHJ32896.1 154 HLFTGKRQPWKGILLYGPPGTGKSYLAKAVAteaNSTFFSVSSSDLVSKWMGE 206
                 5555544444456789************9963336789999999999998765 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.1     0.019        11      16      38 ..      73      95 ..      64      99 .. 0.81
   2 ?    2.7   0.0      0.13        72      28      67 ..     167     202 ..     161     213 .. 0.76
   3 ?    1.0   0.0      0.45   2.4e+02     150     169 ..     214     233 ..     209     236 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.019
                EEEEEETTSSEEEEEESTTSSHH CS
                xxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 16 ktvilpfsksftaivGpNGSGKs 38
                +  +++ ++++  i+G+NGSG s
  KHJ32896.1 73 HLSEIDGKRKVPGIIGANGSGAS 95
                456788899999*********87 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.13
                 EEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC-- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  28 aivGpNGSGKsnlldAilFvLGersakklrseklsdlihk 67 
                  ++Gp G GKs l  A+     +++++++ s + sdl++k
  KHJ32896.1 167 LLYGPPGTGKSYLAKAV----ATEANSTFFSVSSSDLVSK 202
                 579*************9....4555667777777777776 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.45
                 HHHHHCCS--SEEEECTTTT CS
                 xxxxxxxxxxxxxxxxxxxx RF
       SMC_N 150 lfAiqkvkpaplyllDeida 169
                 lfA+ + ++ ++ ++De+da
  KHJ32896.1 214 LFAMARENRPSIIFIDEVDA 233
                 79*****************8 PP

>> USP8_dimer  USP8 dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.7   0.00022      0.12      34     110 ..       6      76 ..       1      79 [. 0.83

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00022
  USP8_dimer  34 llrsaeklfkkAeeyrlegdeEkAYvlymkylnllelIrkksdykekkasvkellgdkkankvildklekLkesLkk 110
                 +l +a +++kkA e+    + EkAY ly + l l+ l  k ++ ++ k+++++     k  ++ l+++ekLk+ L++
  KHJ32896.1   6 FLGRAIEIVKKAIEADIATEYEKAYQLYYQSLELFMLALKWEKNAKAKEMIRA-----KVGEY-LERAEKLKNHLSE 76 
                 6778999****************************888877666666666666.....55678.799******9986 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.2      0.37     2e+02      19      36 ..      77      95 ..      69      96 .. 0.70
   2 ?    8.8   0.0    0.0024       1.3      12      43 ..     156     184 ..     154     197 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.37
      AAA_29 19 idlkg.atlltGpsGsGKS 36
                id k  +  ++G++GsG S
  KHJ32896.1 77 IDGKRkVPGIIGANGSGAS 95
                5544445669*******76 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0024
      AAA_29  12 fdghtieidlkgatlltGpsGsGKSTllDAiq 43 
                 f+g++ + +  g +ll Gp G+GKS l  A++
  KHJ32896.1 156 FTGKRQPWK--G-ILLYGPPGTGKSYLAKAVA 184
                 555555555..7.9***********9976665 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00019       0.1     112     136 ..     161     185 ..     151     195 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00019
   Parvo_NS1 112 gkrntvwfyGpantGktnlaeaIak 136
                 ++   +++yGp+ tGk++la+a a+
  KHJ32896.1 161 QPWKGILLYGPPGTGKSYLAKAVAT 185
                 5556799***************986 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1    0.0003      0.16      23      43 ..     167     187 ..     163     194 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0003
                 EEE--TTSSTTHHHHHHHHHH CS
        PhoH  23 faiGpaGtGKtylavalavea 43 
                    Gp GtGK+yla a+a ea
  KHJ32896.1 167 LLYGPPGTGKSYLAKAVATEA 187
                 568**************9887 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0    0.0028       1.5      17      40 ..     164     187 ..     154     200 .. 0.84
   2 ?    0.6   0.0      0.53   2.9e+02      79     100 ..     206     227 ..     193     229 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0028
  Zeta_toxin  17 klillgGqpGAGKselaellkdel 40 
                 k ill G pG GKs+la+++++e 
  KHJ32896.1 164 KGILLYGPPGTGKSYLAKAVATEA 187
                 558999**************9997 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.53
  Zeta_toxin  79 daselvekllqeaiengyniiv 100
                 ++ +lv++l++ a en+ +ii+
  KHJ32896.1 206 ESERLVKQLFAMARENRPSIIF 227
                 6789****************97 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0    0.0012      0.63       3      25 ..     166     188 ..     164     200 .. 0.90
   2 ?   -0.6   0.0         2   1.1e+03      55      99 ..     197     240 ..     187     256 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0012
                 EEEEC-TTTCHHHHHHHHHHHHC CS
       NACHT   3 vilqGeaGsGKTtLlqklalawa 25 
                 ++l G++G GK++L++ +a+++ 
  KHJ32896.1 166 ILLYGPPGTGKSYLAKAVATEAN 188
                 7899**************99876 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 2
                 CHHHCCCCTS--SSS-CCHHHHCCSCCCEEEEEE-STT-SS-TCH CS
       NACHT  55 adllfsqlpepaapvsevwavllelperlLlilDglDelvtdlgq 99 
                  dl+ + + e+++ v++ +a+  e++ ++ + +D +D l+   g+
  KHJ32896.1 197 SDLVSKWMGESERLVKQLFAMARENRPSIIF-IDEVDALCGPRGE 240
                 5666666777888888877777777777776.5999999887777 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00086      0.47      25      57 ..     166     195 ..     157     235 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00086
                      EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEE CS
  Sigma54_activat  25 vlitGesGtGKellaraiheaskrkekpfvavn 57 
                      +l+ G  GtGK++la+a+ ++ +   + f +v 
       KHJ32896.1 166 ILLYGPPGTGKSYLAKAVATEAN---STFFSVS 195
                      89**************9976543...4455555 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.2       8.6   4.7e+03      52      71 ..      39      62 ..      14      83 .. 0.50
   2 ?    8.9   0.0    0.0024       1.3      17      44 ..     160     187 ..     157     195 .. 0.85
   3 ?    0.1   0.0       1.1   6.1e+02     110     131 ..     214     235 ..     186     242 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 8.6
    ATPase_2 52 iyyialreesiskldefie....e 71
                +++ al+ e+++k++e+i+    e
  KHJ32896.1 39 LFMLALKWEKNAKAKEMIRakvgE 62
                344444444444444443333321 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0024
    ATPase_2  17 repneiyfiYGpegsGKtaLlkeiienl 44 
                 r+p++ +++YGp g GK+ L k ++++ 
  KHJ32896.1 160 RQPWKGILLYGPPGTGKSYLAKAVATEA 187
                 7889999***************998876 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 1.1
    ATPase_2 110 lekikkkgkkiiiiiDelqkli 131
                 l ++ ++ +  ii+iDe+  l 
  KHJ32896.1 214 LFAMARENRPSIIFIDEVDALC 235
                 3455666666899999998765 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       9.6   5.2e+03      44      92 ..      13      74 ..      10      83 .. 0.54
   2 ?    1.2   0.9      0.89   4.8e+02      12      25 ..      82      95 ..      70      96 .. 0.85
   3 ?    8.6   0.0    0.0046       2.5      14      36 ..     166     188 ..     158     215 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 9.6
                ETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.............HHHTCHHHHHHHS CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............xxxxxxxxxxxxx RF
    ABC_tran 44 ldgkdlkeqeleslrkeigvlpqepqlfpeltvren.............esdeeiekalskl 92
                + +k ++ +  ++++k  + + q  +lf      e+             e+ e++ek+ ++l
  KHJ32896.1 13 IVKKAIEADIATEYEKAYQLYYQSLELFMLALKWEKnakakemirakvgEYLERAEKLKNHL 74
                55666666777777788888888877776654333324444444444443333344444444 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.89
                SEEEEEESTTSSHH CS
                xxxxxxxxxxxxxx RF
    ABC_tran 12 ekvaivGenGaGKS 25
                ++ +i+G nG+G S
  KHJ32896.1 82 KVPGIIGANGSGAS 95
                5569********77 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.0046
                 EEEEESTTSSHHHHHHHHTTSS- CS
                 xxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllagllk 36 
                 + + G+ G+GKS L+k++a + +
  KHJ32896.1 166 ILLYGPPGTGKSYLAKAVATEAN 188
                 6799*************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                        33  (0.00184059); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              33  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 3155.48
//
Query:       KHJ32897.1  [L=157]
Description: putative ribosomal protein s17 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-19   69.2   0.4    4.5e-19   68.3   0.4    1.5  1  Ribosomal_S17  Ribosomal protein S17


Domain annotation for each model (and alignments):
>> Ribosomal_S17  Ribosomal protein S17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.3   0.4   2.5e-23   4.5e-19       2      66 ..      21      86 ..      20      88 .. 0.97

  Alignments for each domain:
  == domain 1  score: 68.3 bits;  conditional E-value: 2.5e-23
                   EEEE-.-STTEEEEEEEEEEEETTTTEEEEEEEEEEEE-TTTS--TT-EEEEEEECECSSSEEEEE CS
  Ribosomal_S17  2 vVvsd.kmdkTvvVrverlvkhpkykkyvkrrkkylahdennsvkvGDiVrieecrPlSktkrfvv 66
                   vV+s+  m+kTv+ r   + +++++kk ++r+k +l+hd+n+s+++GDi+ i++  ++Skt+r+ v
     KHJ32897.1 21 VVISAgLMQKTVKARTGVQEWNNHIKKNFNRHKDVLVHDPNDSLRTGDIISISSGMRFSKTVRHIV 86
                   7999999*********************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       902  (0.0503096); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1185.17
//
Query:       KHJ32898.1  [L=695]
Description: putative component of oligomeric golgi complex 6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   5.6e-197  655.8  19.3   6.3e-197  655.6  19.3    1.0  1  COG6           Conserved oligomeric complex COG6
  ------ inclusion threshold ------
      0.076   13.1   0.0       0.31   11.1   0.0    2.1  1  GvpK           Gas vesicle protein K
      0.081   12.5   2.1       0.11   12.2   0.1    2.1  2  DUF4085        Protein of unknown function (DUF4085)
       0.13   10.8   0.0       0.27    9.7   0.0    1.5  1  Met_asp_mut_E  Methylaspartate mutase E chain (MutE)
       0.18   12.3   0.9        2.2    8.8   0.0    3.1  3  CSTF2_hinge    Hinge domain of cleavage stimulation factor su


Domain annotation for each model (and alignments):
>> COG6  Conserved oligomeric complex COG6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  655.6  19.3  1.8e-200  6.3e-197       1     627 []      52     694 ..      52     694 .. 0.96

  Alignments for each domain:
  == domain 1  score: 655.6 bits;  conditional E-value: 1.8e-200
        COG6   1 algtlsefytentaeaRrnLrsdiekellkineefleefqpvaeqLkriesdveklnelcdemkkklssakeetsdlleeaeeLkeekkklelkqkllk 99 
                 al++l++++++n+  +Rr+Lr d++ke++++n+ ++ e++ v eqLk+i++++  ln++ +e+k+ +s a++ets+ leea++L ++k+++e k++l+k
  KHJ32898.1  52 ALSILDTRGLNNNSVTRRQLRYDVQKEVIESNGYIIGELGYVSEQLKKIGTTIMCLNQSFKELKSIVSIAHQETSSTLEEASDLLTQKDQVEVKEQLVK 150
                 699************************************************************************************************ PP

        COG6 100 aflkkFtLseeEeaaLtsgee.vddeFFkaLakvkeIhedCkiLLatenqraGleimeqmskyleaayekLyrwvqkelkslnsednpeissllrkalr 197
                 af+ +F+Lse+++ +L+s++  vddeFF+++ ++k+I++dC+iLL+tenqr+Gleimeq++++l++a++kL+rw+q+e+k ln e+ p+i s++r+alr
  KHJ32898.1 151 AFNAHFILSENDISILSSTAVsVDDEFFNVFYRAKKIQKDCEILLGTENQRLGLEIMEQVTSTLNSAFQKLFRWIQREFKYLNLEN-PQITSSIRRALR 248
                 **************************************************************************************.************ PP

        COG6 198 vLkerpvlFkecldevaeaRskalldeFisal.....trggpggsprPielsAhDplRYvGDmLAwvHqaiasErEllesLfkfqegdeiakglqaknk 291
                 +L+erp+lF+  ld++ae+R+++l+++F+sal     t+++  + ++Piel AhDplRY+GDmLAw+H+a++sE+E+le+Lf  ++g eiakg++a+ k
  KHJ32898.1 249 ALAERPSLFQRSLDSFAETRESTLSESFYSALsgsslTGEQGLSVVKPIELTAHDPLRYIGDMLAWIHSATVSEKEALEVLF-VTDGAEIAKGIEAGWK 346
                 ********************************5555444448899*************************************.556999********** PP

        COG6 292 eelesl..kkeeeeeefdee..lnklldrilegvcrplkvRvEqvlqseedlitlykianlleFYsstfskllgsdssLvetleeleklakkkffsllk 386
                 +el+s+  ++e ++ +f++   ln+l d+ ++gv + l++Rv q++qs+e+ it+yki+nll+FY+ tfskll++ds+Lv+ l++le++a ++f+ l+k
  KHJ32898.1 347 KELWSKlsEDEGKAFDFNGTkaLNELFDHGFNGVTSVLRQRVGQLIQSHEESITAYKIVNLLNFYHVTFSKLLNEDSDLVRSLSNLEESAYRQFRLLMK 445
                 ******7544455555555599***************************************************************************** PP

        COG6 387 dklakll..pelppsdLspPewlsealskllelletyesslaseaserekdfeevlsalldpllqacersakklekkdkaifliNcldliqstLspysf 483
                 d++a+l+  ++++p++  pPe+l + l++l+++++tye+slas  ++re+df+++l++ ++p+l+ ce++a++l  + ++ifliN+l +i +tLsp+sf
  KHJ32898.1 446 DQVANLQldAQVVPKTFGPPEFLYDSLKQLTAIMKTYETSLAS-INNREADFKSILDDSFEPFLSRCEEMAADLIIPYSSIFLINSLLTIAKTLSPFSF 543
                 *******7777779****************************9.99***************************************************** PP

        COG6 484 askkveelqaqieelvdtLveeqaselleksgLsdllnllnmiqpeedestyeplsenplmepeslkealqkLdefLpsaltdalenlekLqspklrse 582
                 ++k+++ +q++i++++++Lve+q s+l eksgL++++++l +++++  e++   l +++ ++++ l++++++Ld fLpsal+d++enl+ Lq+p+l++ 
  KHJ32898.1 544 TKKRLSLIQQNIDKQSRNLVEHQFSYLQEKSGLKPIFHALSSVSNS--EQDLRALRTLEPLQRDFLEKVSETLDCFLPSALIDVIENLKFLQDPSLVRM 640
                 *******************************************986..78889********************************************** PP

        COG6 583 iteeaaeklveaYekleeaildpk.....ngyeepk.....slfrrtpeeirtlL 627
                 ite+a+ek++  +e++e+ i+ ++     n+ +  k     ++f+rt++e+r+lL
  KHJ32898.1 641 ITEKAVEKFCVEFEQVEQKIIAADgiweqNEDQM-KrvplrTIFPRTSSELRVLL 694
                 ************************9987633322.235678***********998 PP

>> GvpK  Gas vesicle protein K
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   8.6e-05      0.31      43      85 .]      94     136 ..      89     136 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.6e-05
        GvpK  43 deeierlgetLmkleeeleelkesfgleeedLnldLgplgtll 85 
                  e++ ++g+t+m l+++ +elk+ + + +++    L++  +ll
  KHJ32898.1  94 SEQLKKIGTTIMCLNQSFKELKSIVSIAHQETSSTLEEASDLL 136
                 57999****************************9999988876 PP

>> DUF4085  Protein of unknown function (DUF4085)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.2      0.44   1.6e+03      29      71 ..     126     167 ..      95     223 .. 0.67
   2 ?   12.2   0.1   2.9e-05      0.11      37     112 ..     598     674 ..     577     678 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.44
     DUF4085  29 aeekeegedleellkeeleelKedLLkfLPkeilpyiqdi.tln 71 
                     ee+ dl+   k+++e +Ke+L+k   ++++   +di +l 
  KHJ32898.1 126 SSTLEEASDLLTQ-KDQVE-VKEQLVKAFNAHFILSENDIsILS 167
                 2334455566554.66665.688888877777766666664444 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 2.9e-05
     DUF4085  37 dleellkeeleelKedLLkfLPkeilpyiqdi.tlnsevaseevk.kevdkwsreyekrfeqvldsyveyfnsiakkl 112
                  le l+++ le++ e L  fLP+ ++++i++   l  +++   +  k v+k+  e e ++eq+ +++   +++ ++++
  KHJ32898.1 598 TLEPLQRDFLEKVSETLDCFLPSALIDVIENLkFLQDPSLVRMITeKAVEKFCVEFE-QVEQKIIAADGIWEQNEDQM 674
                 578899**************************9999999999986156899****98.59999999999998887765 PP

>> Met_asp_mut_E  Methylaspartate mutase E chain (MutE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   7.6e-05      0.27     198     239 ..     570     611 ..     558     618 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 7.6e-05
  Met_asp_mut_E 198 laaeqGvksitvgygqvgnlvqDvaalraleelaeeylkkfg 239
                    l  + G+k i    + v+n +qD+ alr+le l++++l+k++
     KHJ32898.1 570 LQEKSGLKPIFHALSSVSNSEQDLRALRTLEPLQRDFLEKVS 611
                    56788*********************************9875 PP

>> CSTF2_hinge  Hinge domain of cleavage stimulation factor subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.85   3.1e+03      35      55 ..     112     139 ..      93     143 .. 0.59
   2 ?   -1.1   0.0      0.78   2.8e+03       6      28 ..     197     220 ..     194     250 .. 0.61
   3 ?    8.8   0.0   0.00061       2.2      11      40 ..     603     632 ..     595     643 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.85
  CSTF2_hinge  35 sqlKalaqqnp.......sqarelLkqn 55 
                  ++lK++++          ++a +lL+q+
   KHJ32898.1 112 KELKSIVSIAHqetsstlEEASDLLTQK 139
                  5566666555512233335566666655 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.78
  CSTF2_hinge   6 vqlpp.glsapdaIsktLsslppe 28 
                  ++ +  gl+  +++++tL+s  ++
   KHJ32898.1 197 TENQRlGLEIMEQVTSTLNSAFQK 220
                  556666777788888888775444 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.00061
  CSTF2_hinge  11 glsapdaIsktLsslppeqllellsqlKal 40 
                  +    +++s+tL+ + p+ l++++++lK l
   KHJ32898.1 603 QRDFLEKVSETLDCFLPSALIDVIENLKFL 632
                  5566799*********************65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (695 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       830  (0.0462937); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 4927.33
//
Query:       KHJ32899.1  [L=839]
Description: putative vacuolar import and degradation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   4.4e-187  621.4   0.0   6.6e-187  620.8   0.0    1.2  1  VID27     VID27 C-terminal WD40-like domain
    1.8e-69  233.0   0.4    1.8e-69  233.0   0.4    2.8  2  VID27_N   VID27 N-terminal region
    1.3e-41  141.3   2.5    2.9e-41  140.2   2.5    1.6  1  VID27_PH  VID27 PH-like domain
  ------ inclusion threshold ------
       0.07   11.7   3.7       0.11   11.1   3.7    1.2  1  DUF2151   Cell cycle and development regulator


Domain annotation for each model (and alignments):
>> VID27  VID27 C-terminal WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  620.8   0.0  1.5e-190  6.6e-187       1     355 [.     450     803 ..     450     804 .. 0.99

  Alignments for each domain:
  == domain 1  score: 620.8 bits;  conditional E-value: 1.5e-190
       VID27   1 eknsqlavgykndrsfvvrgdkiGvfkhtddnelefstaiskvetlkgkllsPkkvmlheedrklilqdekdknklykmDlerGkvvdewkvhddipvv 99 
                 ++ns lavgykndrsfvvrg+kiGvfkht++n lef+t+i ++et+ gkl+sPkkvmlheed++l+lq+e+++++ly+mDle+Gk+vdew++h di+v+
  KHJ32899.1 450 NENSLLAVGYKNDRSFVVRGSKIGVFKHTPNN-LEFATNIARIETPGGKLFSPKKVMLHEEDSSLVLQNESNPHSLYRMDLEYGKIVDEWNIHPDIKVE 547
                 58****************************98.****************************************************************** PP

       VID27 100 efapekkfaqlteeqtllGlsknalfriDPrlsgnklvdselkqyaskndfsavattekGyiavasekGdirlfdrlginaktalPalgdpiigldvsa 198
                 +f+pe+kfaq+t+e++++G+s+nalfriDPrlsg+klvds+lkqy+skndf+a attekGyiavas+kGdir+fdrlginakt++Palg+piigldvsa
  KHJ32899.1 548 TFTPENKFAQMTSEKSFIGISRNALFRIDPRLSGQKLVDSQLKQYVSKNDFTATATTEKGYIAVASNKGDIRMFDRLGINAKTQIPALGEPIIGLDVSA 646
                 *************************************************************************************************** PP

       VID27 199 dGrwvlatcktyllLiDalikegkneGklgfeksfakdskpkprrLklkpehvaqlqeetkkpvsftkakfntgldseettivtstGpfvitwslkkvl 297
                 +Grw+latc+t llLiDal+k+gkn+Gklgfeksfakdskp+prrL l+p+hvaq+q+et+ p+sf +a+fntg+++eet+i+t+tGpfv+twslkk+l
  KHJ32899.1 647 NGRWILATCRTCLLLIDALQKDGKNKGKLGFEKSFAKDSKPQPRRLGLTPSHVAQFQHETGFPLSFRTAHFNTGEGHEETSIITATGPFVVTWSLKKIL 745
                 *************************************************************************************************** PP

       VID27 298 kgkkdpYkikryeeevvadnfkfgsdknvivalkndvsmvkkkslkkptreslateak 355
                 +g+k+pY+ikry+eev+adnf++gsdknviv+l+n+v+mv+k+sl+kptres++t+++
  KHJ32899.1 746 NGNKEPYTIKRYTEEVKADNFRYGSDKNVIVTLPNEVNMVAKNSLRKPTRESIMTPTR 803
                 ******************************************************9875 PP

>> VID27_N  VID27 N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.0   0.4     4e-73   1.8e-69       1     172 [.       1     175 [.       1     176 [. 0.97
   2 ?  -11.2  15.7         4   1.8e+04      67     103 ..     402     441 ..     381     457 .. 0.54

  Alignments for each domain:
  == domain 1  score: 233.0 bits;  conditional E-value: 4e-73
     VID27_N   1 MfllkslgkllfgssskeelieipsGqLylvrpqspkgsselifkdAaasirrttqefqyqLvvqrvyeegeeelleeeeeeddea...kkekdekvfl 96 
                 Mf+l+++gk+lfgs+s++ +ie+p+GqLylvrp+spk++selifkdAaa+i+rt+qe+q+qLv+qr+yeegee+l ee+++ + e+   ++e+dek+fl
  KHJ32899.1   1 MFVLRNVGKFLFGSTSRDTIIELPQGQLYLVRPSSPKSYSELIFKDAAARIQRTNQEHQFQLVIQRAYEEGEEDLGEEDDDGNPEQatlAAERDEKTFL 99 
                 9***************************************************************************999998887446799******** PP

     VID27_N  97 ldeeLkfrveekedgekvlaWrdlsgdegdlyeFvvdesvkeeevkqfelvayqcqyErkyrksaekateedLeef 172
                 ld+ L+fr+e +e+g+k+laWrdlsgd+gd+y+Fv+d+s+ ++ v++fe +a +cqyEr++rks ++at++dL ++
  KHJ32899.1 100 LDKILHFRSEVREGGDKILAWRDLSGDNGDIYQFVCDHSIDDDLVRNFEIIARNCQYEREHRKSYQTATKQDLAKY 175
                 *************************************************************************987 PP

  == domain 2  score: -11.2 bits;  conditional E-value: 4
     VID27_N  67 vyeege......eelleeeeeeddeakkekdekvflldeeLkf 103
                 vyee e      +   ee e+e+++++  +  + +  deeL+ 
  KHJ32899.1 402 VYEESEkqeqyyQ---EERESEEEDDNDAQKSEEYDTDEELDN 441
                 4555442222211...111111111233344445666666654 PP

>> VID27_PH  VID27 PH-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.2   2.5   6.4e-45   2.9e-41       2     108 ..     255     360 ..     254     361 .. 0.98

  Alignments for each domain:
  == domain 1  score: 140.2 bits;  conditional E-value: 6.4e-45
    VID27_PH   2 llaeeeaeLhlfDaesgeFilqeeevkaavielgkweYwLqiegeeekewlgqevsadmnpvfnfeylsfifnyvsedgealSwlLrFkdeeeleefqe 100
                 +l++e+aeLhlfD+e+g+Filq++ v+a v+e ++w+Yw+++++++ k w+gq+v ad+npvfnfe+lsfifn++s++g a+SwlLrF+d e +++fqe
  KHJ32899.1 255 TLCRETAELHLFDFETGAFILQDSIVDAIVSEIDNWKYWIEVSTKD-KIWVGQSVIADINPVFNFEFLSFIFNAYSDNGDAYSWLLRFQDVEVMTRFQE 352
                 6899***************************************999.88************************************************** PP

    VID27_PH 101 almralwe 108
                 +lm+alw+
  KHJ32899.1 353 GLMQALWQ 360
                 *******7 PP

>> DUF2151  Cell cycle and development regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.7   2.5e-05      0.11     522     619 ..     351     446 ..     339     517 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.5e-05
     DUF2151 522 reeqyrvlwnELekllkkhvttserHkevlkcllecrkkekeeedkkkvkrkfsdkedktekksakeeseksdeesseskkeeeaeresvkeaevdsp 619
                 +e  +++lw+ L+++    +   ++   vl+ ++++  k++ +e++   ++++ ++++k+e+   +ee e+ +e+++ ++k+ee + +++ ++   +p
  KHJ32899.1 351 QEGLMQALWQNLNEMRWESS-KDNDRDYVLEAFQDLAVKDSLDEEEEGEDKEVYEESEKQEQYY-QEERESEEEDDNDAQKSEEYDTDEELDNVSVKP 446
                 5778999*****98755555.559999*****************99999999999999988764.344444444444444444444433333333233 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (839 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1528  (0.0852251); expected 358.6 (0.02)
Passed bias filter:                      647  (0.0360868); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.83u 0.30s 00:00:01.12 Elapsed: 00:00:00.48
# Mc/sec: 5289.02
//
Query:       KHJ32900.1  [L=902]
Description: putative autophagy-related protein 9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.9e-202  672.5  15.6   4.6e-202  672.3  15.6    1.1  1  APG9      Autophagy protein Apg9
  ------ inclusion threshold ------
       0.18   10.5   0.8       0.29    9.8   0.1    1.6  2  DUF2207   Predicted membrane protein (DUF2207)


Domain annotation for each model (and alignments):
>> APG9  Autophagy protein Apg9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  672.3  15.6  5.1e-206  4.6e-202       1     479 []     192     681 ..     192     681 .. 1.00

  Alignments for each domain:
  == domain 1  score: 672.3 bits;  conditional E-value: 5.1e-206
        APG9   1 wkwanvenLDaFlqevYeYyqgkGllcivlsrvlelltlvfvvvfstfLllcvdysklleeksekvslsdvivekcvsklslltllllvlfllywvlkl 99 
                 w+w n++nLD+F++++Y+Yy+g G++ci+l+r l+l+++vfv  f+tfL++cv+++++    + +++ls+++v++c++k+s++++l+++lf++ +++++
  KHJ32900.1 192 WHWINITNLDNFIRDLYDYYTGAGIWCILLERTLNLVQVVFVASFTTFLTQCVEFQNI----PGSKKLSEILVPQCTKKISGIASLAIWLFTFHVFWRV 286
                 89********************************************************....99*********************************** PP

        APG9 100 lkflldlrrlleirsfytelLkisdedlqtisWqevverlvelqkenaltakkk..............eldaldianrimRkeNYliAlinkdiLdltl 184
                 +++++d+++ll++r+fy  lL+i++ d+qtisWq+vv+r+++l+++n++ta++               +lda+dianr+mR+eNYliAl+nkdiLdltl
  KHJ32900.1 287 CQLIADIPHLLRVREFYIFLLEIPEIDMQTISWQDVVARIMTLRDANPITAEDIppsnrrfigsqskqRLDAHDIANRLMRRENYLIALFNKDILDLTL 385
                 **************************************************8888999****************************************** PP

        APG9 185 plPllgerqlltktlewnlelcllnflFdekgqlreeflkekkrkelaeeLrkrfllagvlnlllaPfiviylllyfffryaeelkknpsslgsRrwsp 283
                 p+P+l+ rql+++tl wn++ c+++ +F+++gq+r+ +lke++rk+l+++Lr+rf++ag++n+llaP+i++yl++++f+ry++e++knp+++gsR+++p
  KHJ32900.1 386 PIPFLKARQLFSRTLLWNIDQCIIDLVFNDEGQVRQVILKESHRKQLSDALRRRFMFAGFMNALLAPMIIVYLMIVYFLRYFNEYQKNPAAVGSRQYTP 484
                 *************************************************************************************************** PP

        APG9 284 lAewklRefNELpHlfeaRlnrsyklAskYldqfpseklaiiakfvafvagsiaavlvvlslldeelllefei.egrtvlfyltvlgvilavarslipe 381
                 lA wk+RefNEL+Hlfe+R+n+sy++As+Yldqfp+ k++++a+fvaf+ag+i+ vl+vl+++d+e+l++fei ++r+v+fy++vlg+i+a++++++pe
  KHJ32900.1 485 LALWKFREFNELQHLFEKRVNMSYPFASRYLDQFPKVKVTQVARFVAFCAGAIVSVLAVLTFWDPEMLTNFEItSDRPVVFYIGVLGAIWALTNGMLPE 583
                 *************************************************************************************************** PP

        APG9 382 enevfdpeallrevlehtHYlpdeWkgklhteevkkefselfqlkivilleellsvlltPfiLlfslpksaeeivdffreftvevdgvGdvcsfAvfd 479
                 en vf+pe +l++v++++HY+p++W+++lh+++vk+ef++l++lkivi++ee++s+++tPfiL+fslpk+++ i+dffreftv+vdgvG+vcsfAvfd
  KHJ32900.1 584 ENLVFEPEFALQNVIDYIHYMPNHWHNRLHSDDVKTEFAQLYKLKIVIFIEEVFSIIFTPFILWFSLPKCSNLIIDFFREFTVHVDGVGYVCSFAVFD 681
                 *************************************************************************************************9 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   3.3e-05      0.29     181     249 ..     415     482 ..     387     487 .. 0.86
   2 ?   -3.7   0.1      0.42   3.7e+03     385     409 ..     526     564 ..     492     580 .. 0.48

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 3.3e-05
     DUF2207 181 tsgnkldeilkeeqkntreraarlslallillilllilllllllllliklllwkkygrepkvkevdpeY 249
                   g+ ++ ilke  +++ ++a r++++++ ++ +ll  +++++l+++++l+++  y ++p+     ++Y
  KHJ32900.1 415 DEGQVRQVILKESHRKQLSDALRRRFMFAGFMNALLAPMIIVYLMIVYFLRYFNEYQKNPAAVG-SRQY 482
                 56677888999999999********************************999999***999988.7888 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 0.42
     DUF2207 385 alglgliilglilillallllvll.................l 409
                 ++ ++++++g i+++la   + ++                 +
  KHJ32900.1 526 VARFVAFCAGAIVSVLA---VLTFwdpemltnfeitsdrpvV 564
                 33333333333333332...2222355666666666444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (902 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       563  (0.0314016); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.31s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 6068.95
//
Query:       KHJ32901.1  [L=657]
Description: putative aaa family atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-39  134.3   0.0    5.8e-39  133.5   0.0    1.4  1  AAA              ATPase family associated with various cellul
    4.6e-07   29.7   0.0    3.9e-06   26.8   0.0    2.4  2  Vps4_C           Vps4 C terminal oligomerisation domain
    1.1e-06   28.3   0.0    3.3e-06   26.8   0.0    1.7  1  AAA_lid_3        AAA+ lid domain
    5.5e-06   26.7   0.4     0.0015   18.8   0.3    2.6  1  AAA_22           AAA domain
    1.3e-05   25.0   0.0    2.5e-05   24.1   0.0    1.3  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    4.7e-05   22.7   0.1    0.00011   21.6   0.1    1.6  1  TIP49            TIP49 P-loop domain
    8.5e-05   22.7   0.0    0.00016   21.8   0.0    1.5  1  AAA_2            AAA domain (Cdc48 subfamily)
    0.00081   19.2   0.0     0.0016   18.2   0.0    1.4  1  IstB_IS21        IstB-like ATP binding protein
     0.0013   19.2   0.4     0.0048   17.3   0.4    1.9  1  AAA_16           AAA ATPase domain
     0.0022   18.0   0.2     0.0098   15.9   0.2    2.2  1  AAA_5            AAA domain (dynein-related subfamily)
     0.0027   17.1   0.1     0.0061   16.0   0.1    1.5  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
     0.0028   16.9   0.0      0.006   15.8   0.0    1.5  1  DUF815           Protein of unknown function (DUF815)
     0.0052   17.3   0.0      0.018   15.6   0.0    2.0  1  AAA_18           AAA domain
     0.0059   16.8   0.0      0.013   15.7   0.0    1.7  1  AAA_33           AAA domain
     0.0082   16.2   0.0      0.028   14.5   0.0    2.0  1  AAA_14           AAA domain
  ------ inclusion threshold ------
      0.018   14.8   0.0      0.057   13.1   0.0    1.8  2  AAA_24           AAA domain
      0.039   14.3   0.0       0.15   12.5   0.0    2.2  1  RNA_helicase     RNA helicase
      0.046   13.2   0.3       0.37   10.2   0.1    2.2  2  PhoH             PhoH-like protein
      0.046   14.0   0.9       0.29   11.4   0.1    2.5  2  AAA_28           AAA domain
      0.064   13.2   0.1        0.2   11.5   0.1    1.9  1  NACHT            NACHT domain
      0.066   13.7   0.0       0.23   11.9   0.0    1.9  1  ABC_tran         ABC transporter
      0.072   12.7   0.0       0.25   10.9   0.0    1.8  2  AAA_25           AAA domain
      0.094   12.1   0.0        5.3    6.4   0.0    2.5  2  TniB             Bacterial TniB protein
        0.1   12.1   1.8       0.21   11.1   0.0    2.3  3  AAA_7            P-loop containing dynein motor region
       0.11   12.3   0.0       0.39   10.4   0.0    2.0  1  Sigma54_activat  Sigma-54 interaction domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.5   0.0   8.1e-42   5.8e-39       1     132 []     405     550 ..     405     550 .. 0.97

  Alignments for each domain:
  == domain 1  score: 133.5 bits;  conditional E-value: 8.1e-42
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH.TTCCCHHHHHHHHHHHHHHHHTTT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr.sgseseeeervvnqLlteldgvkk 98 
                 +ll+GppGtGKT+lakava+e++++f++is+s+l+sky+gesek +r+lf+ ak+ a psi+f+DEid+l +sr  ++e+e+++rv  ++l +++++++
  KHJ32901.1 405 ILLFGPPGTGKTMLAKAVATESKSTFFSISASSLISKYLGESEKLVRALFQLAKALA-PSIIFVDEIDSLLSSRtGQGEHESTRRVKTEFLIQWNDLQR 502
                 69******************************************************9.****************7778********************9 PP

                 S...............SSTEEEEEEESSGGGSTHHHHSTTSSEEEETTS CS
         AAA  99 k...............eskvivigatnrpdkldpallrgRfdrkieiel 132
                                  ++v+v++atn p+ +d+a + +Rf r+++i+l
  KHJ32901.1 503 VssernsdqkeiyqkdAHRVLVLAATNLPWAIDEAAR-RRFVRRQYIPL 550
                 99**************999******************.7******9985 PP

>> Vps4_C  Vps4 C terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0         2   1.4e+03      29      58 ..     555     584 ..     548     586 .. 0.79
   2 !   26.8   0.0   5.4e-09   3.9e-06      27      61 .]     619     653 ..     614     653 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 2
      Vps4_C  29 vtlkDflkalkkarptVskeDLekheeFTk 58 
                  +++ f+k l++++    + +++++   T+
  KHJ32901.1 555 TRISQFQKLLNHQKHELDEPEIQQLAYLTQ 584
                 56889*********9999999998876665 PP

  == domain 2  score: 26.8 bits;  conditional E-value: 5.4e-09
      Vps4_C  27 PpvtlkDflkalkkarptVskeDLekheeFTkefG 61 
                 +p+++ Df+++l++ rp+Vs e L+ +e++ k+fG
  KHJ32901.1 619 RPIKFVDFEASLASIRPSVSIEGLQAFEDWAKKFG 653
                 59********************************9 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   0.0   4.7e-09   3.3e-06       4      33 ..     576     605 ..     573     623 .. 0.91

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 4.7e-09
   AAA_lid_3   4 lkeLAerTeGySGADlaalcreAallAlrr 33 
                 +++LA +T+G+SG D+ al + Aa+  lr 
  KHJ32901.1 576 IQQLAYLTQGFSGSDITALAKDAAMGPLRS 605
                 789**********************99886 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.3     2e-06    0.0015       5      49 ..     402     437 ..     399     524 .. 0.73

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 2e-06
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlps 49 
                 a+ ++++G++GtGKT+l++ ++ +          +++++++ ++s
  KHJ32901.1 402 ARGILLFGPPGTGKTMLAKAVATES---------KSTFFSISASS 437
                 67799****************9997.........44444444444 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   3.5e-08   2.5e-05      34      96 ..     403     473 ..     397     478 .. 0.74

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 3.5e-08
      RuvB_N  34 dhvllyGpPGlGkttlakiiakelgvklkitsgP.vlek....agdlaalltnleek...dvlfideihrl 96 
                   +ll+GpPG Gkt lak +a+e ++++ + s+   ++k    +  l+  l +l +     ++f+dei  l
  KHJ32901.1 403 RGILLFGPPGTGKTMLAKAVATESKSTFFSISASsLISKylgeSEKLVRALFQLAKAlapSIIFVDEIDSL 473
                 569********************99987666554145442222678888888887643448*******876 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.1   1.5e-07   0.00011      50     103 ..     402     453 ..     338     461 .. 0.86

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 1.5e-07
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  50 GravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevkktevltqal 103
                  r++Ll Gp+gtGkt la a++ e  ++  f ++s+s + s  +  +e l++al
  KHJ32901.1 402 ARGILLFGPPGTGKTMLAKAVATE--SKSTFFSISASSLISKYLGESEKLVRAL 453
                 499*******************98..4578999***********9999999886 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   2.2e-07   0.00016       6     136 ..     405     537 ..     400     578 .. 0.74

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 2.2e-07
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG---..----THHHHHHHHHTTT-HHHHTTSEEEEETGGG----.---------HHHHHH.HH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegGivllDEidKihpk.essgadvSregVqrd.LL 100
                 ill gp g+Gkt+laka+a   +    +++  + as+l+     e+e+lv  l + +++        i+++DEid   ++ + +g+  S   V +  L 
  KHJ32901.1 405 ILLFGPPGTGKTMLAKAVATESK----STFFSISASSLISkyLGESEKLVRALFQLAKALA----PSIIFVDEIDSLLSSrTGQGEHESTRRVKTEfLI 495
                 8999***************9998....5999999999998555688888888888888776....56*********99988888888888888765145 PP

                 HHHH--EE-.....----.--EE-TT-EEEEEE--TTHHHHT CS
       AAA_2 101 qileggtlt.....dkqg.rkvdtknilfImtgafgsskisd 136
                 q  +  +++     d+++  + d   +l+++++++  +  + 
  KHJ32901.1 496 QWNDLQRVSsernsDQKEiYQKDAHRVLVLAATNLPWAIDEA 537
                 666666776666666666667777777777777776665555 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   2.2e-06    0.0016      48     117 ..     403     470 ..     389     481 .. 0.70

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 2.2e-06
   IstB_IS21  48 enivllGpsGvGKshlaialgveavraglsvlfvrvedLvee.lkrarrdgklaralkrllkvdllilDdl 117
                  +i+l+Gp+G+GK+ la a+++e   + +s+   +++ L+++ l   ++  ++  +l++ l+++++ +D++
  KHJ32901.1 403 RGILLFGPPGTGKTMLAKAVATESKSTFFSI---SASSLISKyLGESEKLVRALFQLAKALAPSIIFVDEI 470
                 689****************998765444443...4445544325555555566666666666777777776 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.4   6.7e-06    0.0048      24      63 ..     401     438 ..     395     525 .. 0.67

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 6.7e-06
      AAA_16  24 p.elvllsGesGvGKsslvrellralekdggiflrgkcdql 63 
                 p + +ll G++G+GK+ l+++++++ + +   f++  + +l
  KHJ32901.1 401 PaRGILLFGPPGTGKTMLAKAVATESKST---FFSISASSL 438
                 4589*******************866655...555555444 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.2   1.4e-05    0.0098       2      31 ..     405     434 ..     404     542 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.4e-05
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvq 31 
                 +lL GppGtgK++la+ +a   +++++ + 
  KHJ32901.1 405 ILLFGPPGTGKTMLAKAVATESKSTFFSIS 434
                 89**************99876666666554 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.1   8.5e-06    0.0061      25      43 ..     405     423 ..     402     434 .. 0.91

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 8.5e-06
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +ll+GppG+GKtmlak+++
    KHJ32901.1 405 ILLFGPPGTGKTMLAKAVA 423
                   89*************9976 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   8.4e-06     0.006      19     115 ..     360     469 ..     349     473 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 8.4e-06
      DUF815  19 veevdevklddLvgidkqkealvente.qfle.......glpannvLLwGarGtGKSslvkallneyaeeg..Lrlievekedlkelpklvellr...e 104
                 v + d+v +dd+vg++  k+al+e +   fl+        +pa+ +LL+G  GtGK  l ka+ +e +++   +    +  + l e +klv++l    +
  KHJ32901.1 360 VIKGDKVYWDDIVGLEVAKAALKEAVVyPFLRpdlfiglREPARGILLFGPPGTGKTMLAKAVATESKSTFfsISASSLISKYLGESEKLVRALFqlaK 458
                 556788889999999999999998764245553333323579***********************9999884433344555556666666655541114 PP

      DUF815 105 rperfilfvDD 115
                 +    i+fvD 
  KHJ32901.1 459 ALAPSIIFVDE 469
                 44456777775 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   2.5e-05     0.018       1      25 [.     405     446 ..     405     541 .. 0.66

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2.5e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.................g 25 
                 Ill G+pG+GKt lak+++ + ++                 +
  KHJ32901.1 405 ILLFGPPGTGKTMLAKAVATESKStffsisassliskylgeS 446
                 99****************665433446555544444444440 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.8e-05     0.013       2      41 ..     405     446 ..     405     544 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.8e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlfgtd 41 
                 +ll G+pG+GK+ la+ ++ + +  ++ +s  +l++++ g+ 
  KHJ32901.1 405 ILLFGPPGTGKTMLAKAVATESKstFFSISASSLISKYLGES 446
                 6899**************999998888899999877776643 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   3.9e-05     0.028       5      76 ..     405     473 ..     402     526 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.9e-05
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 +++ G+  +GKT+l+k ++ e+    + ++ i+  +   k l ++ekl +++++++k+   +++f DEi  +
  KHJ32901.1 405 ILLFGPPGTGKTMLAKAVATESK---STFFSISASSLISKYLGESEKLVRALFQLAKALAPSIIFVDEIDSL 473
                 6889***************9888...999999999988887788889999999997777899*******865 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0     8e-05     0.057       5      33 ..     405     435 ..     402     489 .. 0.73
   2 ?   -2.7   0.0       5.5     4e+03      28      52 ..     623     648 ..     619     654 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 8e-05
      AAA_24   5 iliyGpsgiGKTtlakel..gpkplfidtek 33 
                 il++Gp+g+GKT+lak    + k  f+ + +
  KHJ32901.1 405 ILLFGPPGTGKTMLAKAVatESKSTFFSISA 435
                 89**************998755555555555 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 5.5
      AAA_24  28 fidtekGlksldadkfpdie...swedf 52 
                 f+d+e++l+s+ +    +ie   ++ed+
  KHJ32901.1 623 FVDFEASLASIRPSV--SIEglqAFEDW 648
                 89****999998654..44422244444 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0    0.0002      0.15       1      27 [.     405     431 ..     405     516 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.0002
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklk 27 
                   i+l+Gp+g+GK++lak +a++  +++ 
    KHJ32901.1 405 ILLFGPPGTGKTMLAKAVATESKSTFF 431
                   689**************8877665553 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.59   4.2e+02     142     184 ..     259     302 ..     256     317 .. 0.75
   2 ?   10.2   0.1   0.00052      0.37      23      42 ..     406     425 ..     400     432 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.59
                 TB-TT-EEEEEE----------.----THHHHHHTTT-TTEEEE CS
        PhoH 142 RlGenskvvvtGdvtqidlpkg.kksGlaealevlknvegieiv 184
                 R+ +n kvv+ ++ +  d +k+ + sG  ++ ++ ++    e +
  KHJ32901.1 259 RIKNNGKVVIRHESHSLDARKTsQISGDDTLPSINRKFLAREKI 302
                 999***************99665888877766666655555555 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00052
                 EEE--TTSSTTHHHHHHHHH CS
        PhoH  23 faiGpaGtGKtylavalave 42 
                   +Gp GtGKt+la a+a e
  KHJ32901.1 406 LLFGPPGTGKTMLAKAVATE 425
                 579************99976 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00041      0.29       2      22 ..     405     425 ..     404     456 .. 0.84
   2 ?   -0.2   0.1       1.5   1.1e+03      19      65 ..     525     569 ..     506     578 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00041
      AAA_28   2 ivitGgestGKTtlleaLaar 22 
                 i ++G+++tGKT l++a a +
  KHJ32901.1 405 ILLFGPPGTGKTMLAKAVATE 425
                 789**************9965 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.5
      AAA_28  19 Laargypvv.pEaareileeklakgedalpwv.edllafaervleeqle 65 
                 Laa++ p+   Eaar+ +  ++      lp+   ++ +f+++ l++q++
  KHJ32901.1 525 LAATNLPWAiDEAARRRFVRRQYI---PLPEInTRISQFQKL-LNHQKH 569
                 777788877788887766444333...344443466666664.555555 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   0.00028       0.2       3      25 ..     405     427 ..     403     496 .. 0.95

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00028
                 EEEEC-TTTCHHHHHHHHHHHHC CS
       NACHT   3 vilqGeaGsGKTtLlqklalawa 25 
                 ++l G++G GKT+L++ +a++ +
  KHJ32901.1 405 ILLFGPPGTGKTMLAKAVATESK 427
                 7899**************98865 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00033      0.23      14      80 ..     405     484 ..     400     531 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00033
                 EEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS.--S-TTSBHHHH..............H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx..............x RF
    ABC_tran  14 vaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqe.pqlfpeltvren..............e 80 
                 + ++G+ G+GK+ L+k++a ++k t  +i   +  +k   l +++k ++ l+q  + l p +   ++              e
  KHJ32901.1 405 ILLFGPPGTGKTMLAKAVATESKSTFFSISASSLISK--YLGESEKLVRALFQLaKALAPSIIFVDEidsllssrtgqgehE 484
                 6799******************998888855444444..4778888888888876666666653333466666666655552 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00035      0.25      32      54 ..     401     423 ..     391     427 .. 0.78
   2 ?   -2.6   0.0       4.6   3.3e+03     130     176 ..     450     501 ..     445     502 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00035
      AAA_25  32 agelallaGapgtGKttlaldla 54 
                     +ll+G+pgtGKt+la  +a
  KHJ32901.1 401 PARGILLFGPPGTGKTMLAKAVA 423
                 555689************97666 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 4.6
      AAA_25 130 vdaleaaieevegvrlvviDplsralgg.....densnsdv.galvealeria 176
                 v+al + +++ + +  + +D ++++l+      + +s + v ++++ ++++++
  KHJ32901.1 450 VRALFQLAKALA-PSIIFVDEIDSLLSSrtgqgEHESTRRVkTEFLIQWNDLQ 501
                 566677777754.8888888888777665445233344446778887777765 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0    0.0074       5.3      36      60 ..     403     427 ..     396     438 .. 0.84
   2 ?    2.6   0.0       0.1        75     105     136 ..     447     478 ..     439     490 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0074
        TniB  36 pnlllvGdsnnGKtmivekFarlhp 60 
                 + +ll+G++ +GKtm+++  a + +
  KHJ32901.1 403 RGILLFGPPGTGKTMLAKAVATESK 427
                 689*************998776655 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.1
        TniB 105 skleqqvlrllrelkvrvLiiDEihnllagsa 136
                 +kl ++  +l ++l + ++ +DEi++ll+ + 
  KHJ32901.1 447 EKLVRALFQLAKALAPSIIFVDEIDSLLSSRT 478
                 5677778899999**************98665 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.2       2.5   1.8e+03      65     104 ..     229     268 ..     198     335 .. 0.52
   2 ?   11.1   0.0   0.00029      0.21      34      60 ..     403     429 ..     395     446 .. 0.79
   3 ?   -2.5   0.0       4.2     3e+03     137     172 ..     510     545 ..     482     548 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.5
       AAA_7  65 ltinfsaqtsanqlqdiiesklekrrkgvygPpggkklvv 104
                  +++ + + s n+ ++  +++l +r +  y  +++ k+v+
  KHJ32901.1 229 SKLETTTSSSRNSNKTYTHDSLSRRGGYHYRIKNNGKVVI 268
                 5555555555555555555555555555555555544444 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00029
       AAA_7  34 kpvllvGptGtGKtviikdllkkldke 60 
                 + +ll Gp GtGKt+++k + ++ +++
  KHJ32901.1 403 RGILLFGPPGTGKTMLAKAVATESKST 429
                 679***************988776633 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 4.2
       AAA_7 137 drkklefkeikdvqlvaamgppgggrneitpRllrh 172
                 d+k++  k+ + v ++aa + p    +    R++r+
  KHJ32901.1 510 DQKEIYQKDAHRVLVLAATNLPWAIDEAARRRFVRR 545
                 566677777888999999999998888888888886 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00054      0.39      25      53 ..     405     430 ..     397     449 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00054
                      EEEECSTTSSHHHHHHHHHHHSTTTTS-E CS
  Sigma54_activat  25 vlitGesGtGKellaraiheaskrkekpf 53 
                      +l+ G  GtGK++la+a+ ++sk   + f
       KHJ32901.1 405 ILLFGPPGTGKTMLAKAVATESK---STF 430
                      89***************998877...344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (657 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       849  (0.0473534); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.69u 0.30s 00:00:00.99 Elapsed: 00:00:00.48
# Mc/sec: 4115.96
//
Query:       KHJ32902.1  [L=448]
Description: putative nucleolar protein 56 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-88  295.0   0.1    4.6e-88  294.6   0.1    1.2  1  Nop              snoRNA binding domain, fibrillarin
    2.6e-20   72.6   0.1      1e-19   70.6   0.1    2.1  1  NOP5NT           NOP5NT (NUC127) domain
  ------ inclusion threshold ------
      0.013   15.4   0.0      0.026   14.5   0.0    1.5  1  DUF1441          Protein of unknown function (DUF1441)
       0.04   14.0   0.0       0.11   12.6   0.0    1.7  1  GerPC            Spore germination protein GerPC
      0.067   13.5   1.1        0.2   12.0   0.2    2.3  2  Phage_T7_Capsid  Phage T7 capsid assembly protein
      0.091   13.0   0.2       0.27   11.5   0.2    1.7  1  UBD              Ubiquitin-binding domain


Domain annotation for each model (and alignments):
>> Nop  snoRNA binding domain, fibrillarin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.6   0.1   1.5e-91   4.6e-88       2     229 ..     183     415 ..     182     416 .. 0.94

  Alignments for each domain:
  == domain 1  score: 294.6 bits;  conditional E-value: 1.5e-91
                 HHHHHHHHHHHHHHHHHHHTTTSTCHHHHS-SHHHHHHHHHHCCCCHCCT.HH.TT........HHHHHHHHHHHHCHHHH-SSS-S-HHHHHHHHHHH CS
         Nop   2 ldeidkeintlhkrvrewYswhFpELeslvkdnleYakvvkligneredlekk.ee.......deelakevimaakvtastsmgaelseedlknikelc 92 
                 +d++dk int+++rvrewY+whFpEL ++v+dn +Yak++ +ign+r+ ++++ ++       d e+a+++i+aa+v    smg++ls +d++n+++++
  KHJ32902.1 183 IDHLDKAINTFSMRVREWYGWHFPELIRIVSDNRTYAKLALHIGNKRQLTQDSlHKiaalvndDVEIAQAIIDAARV----SMGQDLSATDIENVSAFA 277
                 689*****************************************7655553334336778865666***********....****************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHCHHHHHHHHHHHHSSHHHHHCS-HHHHTTTT-HHHHCCCHH.T---SSSCHHHCSHHHHHTS-CCCHH CS
         Nop  93 drvleleelrkelleYlesrmsaiAPNlsaLvGeevaarLishaGgLtnLakmPastiqilGaekalfralk.kkntpkyGliyhselvqkatppklkk 190
                 drv++l+e+r++l +Yl ++m+++APNl++L+Ge vaarLishaG+LtnL+k+Past+qilGaekalfralk k+ntpkyGliyhs+++++a  +k+k+
  KHJ32902.1 278 DRVVKLAEYRESLFQYLVNKMAIVAPNLATLIGEVVAARLISHAGSLTNLSKYPASTVQILGAEKALFRALKtKGNTPKYGLIYHSSFIGRA-GAKNKG 375
                 ************************************************************************777***************88.****** PP

                 HHHHHHHHHHHHHHHHHHTT---.-SHHHHHHHHHHHHHH CS
         Nop 191 kiaRllaaKvalaaRiDafsekd.gslGkklreeiekklk 229
                 +i+R+la+K+++a+RiD+f+e++ +++G +l++++e++l+
  KHJ32902.1 376 RISRFLANKCSIASRIDNFTEEPtTKFGMALKKQVEERLN 415
                 *****************9999999**************96 PP

>> NOP5NT  NOP5NT (NUC127) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.6   0.1   3.4e-23     1e-19       1      65 []       6      72 ..       6      72 .. 0.93

  Alignments for each domain:
  == domain 1  score: 70.6 bits;  conditional E-value: 3.4e-23
      NOP5NT  1 fiLfEtaaGYaLfkvkdk.....kllkkddlvkdsvsdlekfsklvkLkaFqkFesaaeALenanaiseG 65
                ++L+E+a+GYa+fkv  +     ++ k+   v+d+  dl+kf+k+vkL++F+++++aaeALenan +seG
  KHJ32902.1  6 YVLHESAVGYAIFKVVAQpetigNRSKE---VQDAALDLAKFGKMVKLVNFAPYRDAAEALENANLVSEG 72
                8**************7777777777777...**************************************9 PP

>> DUF1441  Protein of unknown function (DUF1441)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   8.7e-06     0.026      79     145 ..     198     264 ..     192     268 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 8.7e-06
     DUF1441  79 RlkleketreliPvsEVaseyaalakaivqvLetlPDlLERdagltpdalevvqkvvdevreqlala 145
                 R ++  +  eli +   +++ya+la  i ++ +   D L + a+l  d++e++q ++d +r ++ + 
  KHJ32902.1 198 REWYGWHFPELIRIVSDNRTYAKLALHIGNKRQLTQDSLHKIAALVNDDVEIAQAIIDAARVSMGQD 264
                 777888888999999999*******************************************999865 PP

>> GerPC  Spore germination protein GerPC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   3.6e-05      0.11     122     162 ..     406     445 ..     390     447 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.6e-05
       GerPC 122 ikkQldsRikyYlkqvaaeeeeepeeeelkeeilekvkkdi 162
                 +kkQ+++R+++Y    aa +++e + ++++++il+ +k d 
  KHJ32902.1 406 LKKQVEERLNFYATG-AAPSKNEDVMKSVMDTILSDIKVDA 445
                 79************5.6666667777778999999999885 PP

>> Phage_T7_Capsid  Phage T7 capsid assembly protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0         2     6e+03      48      70 ..      43      66 ..      31      95 .. 0.64
   2 ?   12.0   0.2   6.8e-05       0.2      47     116 ..     216     287 ..     206     293 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2
  Phage_T7_Capsid 48 kfqailshle.aenkdaaesleaa 70
                     kf ++ + ++ a  +daae+le+a
       KHJ32902.1 43 KFGKMVKLVNfAPYRDAAEALENA 66
                     555555555523456788888776 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 6.8e-05
  Phage_T7_Capsid  47 ekfqailshleaenkdaaeslea..alerrDlatvkaiinlageslakkfGkkpkrsvtkrakPakpkaakk 116
                        ++++  h+  + + +++sl++  al++ D+   +aii+ a++s+++ +  +   +v+  a  + + a+ +
       KHJ32902.1 216 RTYAKLALHIGNKRQLTQDSLHKiaALVNDDVEIAQAIIDAARVSMGQDLSATDIENVSAFADRVVKLAEYR 287
                      568899999999999999***85449**********************999999999988887766666555 PP

>> UBD  Ubiquitin-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   8.9e-05      0.27      44      72 ..     235     262 ..     225     270 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 8.9e-05
         UBD  44 alkaalevleeddlataqaildaaeitlp 72 
                 +l++++ +l +dd++ aqai+daa +++ 
  KHJ32902.1 235 SLHKIA-ALVNDDVEIAQAIIDAARVSMG 262
                 677777.7889**************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (448 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       527  (0.0293937); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3194.25
//
Query:       KHJ32903.1  [L=318]
Description: putative mitochondrial rna splicing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-65  217.3   4.0    9.1e-22   76.8   0.1    3.1  3  Mito_carr        Mitochondrial carrier protein
     0.0014   17.8   2.2       0.27   10.3   0.1    3.2  3  Serine_protease  Gammaproteobacterial serine protease


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.8   0.1   2.1e-25   1.9e-21       4      95 ..      29     119 ..      26     121 .. 0.94
   2 !   65.3   0.1   3.8e-22   3.4e-18       5      95 ..     127     214 ..     123     216 .. 0.94
   3 !   76.8   0.1     1e-25   9.1e-22       4      96 ..     219     313 ..     216     314 .. 0.89

  Alignments for each domain:
  == domain 1  score: 75.8 bits;  conditional E-value: 2.1e-25
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 s+l++++aG++ag+ ++ +++P+d +Ktr+q+ + + ++  +++i++  ++i+  eG ++l+rG++  +++  pa+a++f++ye +k+l+  
  KHJ32903.1  29 SLLQNMAAGAFAGISEHALMYPVDAIKTRMQILNPTPSA-IYNGIFQGGYRIITGEGALSLWRGMSSVVVGAGPAHAVYFATYEAVKHLMGG 119
                 7899********************************987.5677********************************************9865 PP

  == domain 2  score: 65.3 bits;  conditional E-value: 3.8e-22
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 +++ + +G++a +++  +++P+dv+K r+q++++++ ++    + d+ + iy++eG++++y  +  +l +++p +al++++ye++ ++l+ 
  KHJ32903.1 127 PIAAVTSGACATIASDALMNPFDVIKQRMQMHNSRKIYRS---LSDCARYIYRTEGITAFYISYPTTLSMTVPFTALQLLAYESVSTFLNP 214
                 678899*****************************98876...9******************************************99975 PP

  == domain 3  score: 76.8 bits;  conditional E-value: 1e-25
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS..TTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCTT CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkkss..kksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllkk 96 
                  +l ++ aG+lag +a+ +ttP+dvvKt lqt ++ +  + ++ +++++  k +y++ G rg+++G+ p+++ ++p++a+++++ye +k ++ +k
  KHJ32903.1 219 DPLTHCSAGALAGGFAAALTTPMDVVKTILQTRGTATdpEVRNVNGFMNGAKLLYQKSGYRGFFKGVKPRVVATMPSTAICWSAYEACKAYFIRK 313
                 578899**************************88886114445555*********************************************9876 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.1   0.0    0.0024        22      17      54 ..      44      83 ..      27     110 .. 0.77
   2 ?    1.8   0.2     0.012   1.1e+02     175     224 ..     114     167 ..     102     200 .. 0.52
   3 !   10.3   0.1     3e-05      0.27     149     217 ..     193     264 ..     186     301 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0024
  Serine_protease 17 vsaltsPfkalLtnlqkdgsvlpsaysgGlfralYr...Gf 54
                       al  P+ a+ t++q+  + +psa+ +G+f++ Yr   G 
       KHJ32903.1 44 EHALMYPVDAIKTRMQIL-NPTPSAIYNGIFQGGYRiitGE 83
                     4577889*********97.88999999******99966633 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.012
  Serine_protease 175 nkllaGalsGv...iAtvlttifnsykDkklla.skvengrlltaspftllkql 224
                      ++l++G  +G+   iA+v +   ++ +   l++   v + r+  +++ ++ + l
       KHJ32903.1 114 KHLMGGNQTGAhhpIAAVTSGACATIASDALMNpFDVIKQRMQMHNSRKIYRSL 167
                      555555555543334555555444444333332134444444444444444444 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 3e-05
  Serine_protease 149 GfvnFaalgvv.edeiakflkind..elynkllaGalsGviAtvlttifnsykDkkllaskvengrlltasp 217
                        v F+al ++  ++++ fl   +  +   +  aGal+G  A+ ltt++   k    ++ + ++ ++++++ 
       KHJ32903.1 193 MTVPFTALQLLaYESVSTFLNPSKayDPLTHCSAGALAGGFAAALTTPMDVVKTILQTRGTATDPEVRNVNG 264
                      567788887651578888887665224578******************999876555555667777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2292.30
//
Query:       KHJ32904.1  [L=108]
Description: putative prefoldin subunit 6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.7e-20   71.3   8.2    6.8e-20   71.0   8.2    1.1  1  Prefoldin_2      Prefoldin subunit
      0.005   15.8   9.8     0.0079   15.1   9.8    1.3  1  Spc7             Spc7 kinetochore protein
  ------ inclusion threshold ------
      0.026   14.5   7.1      0.033   14.3   7.1    1.2  1  Prefoldin_3      Prefoldin subunit
      0.033   14.2  10.6       0.44   10.6   2.9    2.0  2  DUF1664          Protein of unknown function (DUF1664)
      0.037   14.8   4.7       0.31   11.8   1.7    2.1  2  Occludin_ELL     Occludin homology domain
      0.038   14.4   6.9        3.5    8.1   0.0    3.1  2  LPP              Lipoprotein leucine-zipper
      0.049   12.2   7.0      0.058   11.9   7.0    1.0  1  Macoilin         Macoilin family
      0.066   13.4   6.0       0.09   13.0   1.5    2.3  2  JIP_LZII         JNK-interacting protein  leucine zipper II
      0.071   12.7  10.8       0.44   10.1  10.8    1.9  1  PI3K_P85_iSH2    Phosphatidylinositol 3-kinase regulatory sub
      0.082   13.2   0.3      0.091   13.0   0.3    1.1  1  DUF3416          Domain of unknown function (DUF3416)
      0.092   12.8   9.6        1.4    8.9   2.4    2.1  2  Laminin_II       Laminin Domain II
      0.099   12.9   1.9       0.24   11.6   1.0    2.0  2  Coat_F           Coat F domain
       0.17   12.2  10.4        1.2    9.4  10.4    2.0  1  Seryl_tRNA_N     Seryl-tRNA synthetase N-terminal domain
        0.2   11.7   3.9       0.22   11.5   2.9    1.7  2  Turandot         Stress-inducible humoral factor Turandot
       0.26   11.1  15.3       0.77    9.6   1.2    2.6  2  DivIC            Septum formation initiator
       0.31   10.8   8.5          1    9.2   3.3    2.4  2  SKA2             Spindle and kinetochore-associated protein 2
       0.33   11.2  10.5       0.65   10.3   6.4    2.0  2  Spc24            Spc24 subunit of Ndc80
       0.35   10.3   8.6        1.1    8.7   8.7    1.7  1  HBM              Helical bimodular sensor domain
        0.4   10.7  11.7       0.92    9.5   4.8    2.1  2  CENP-F_leu_zip   Leucine-rich repeats of kinetochore protein 
       0.46   10.9   9.2       0.93   10.0   8.8    1.8  1  Snapin_Pallidin  Snapin/Pallidin
       0.49    9.9  10.5        5.1    6.6  10.5    1.9  1  PspA_IM30        PspA/IM30 family
       0.66   10.7   9.8        3.2    8.4   5.2    2.1  2  YabA             Initiation control protein YabA
       0.75    9.8  16.9        1.7    8.7   0.2    2.2  2  FlxA             FlxA-like protein
        0.8    9.7  11.1        0.3   11.0   1.1    2.2  2  MIP-T3_C         Microtubule-binding protein MIP-T3 C-termina
       0.83    9.7   6.5       0.34   11.0   3.0    1.8  2  Peptidase_S49_N  Peptidase family S49 N-terminal
       0.85    9.5  12.2         46    3.9  12.2    2.4  1  Prefoldin        Prefoldin subunit
          1    8.1  12.5         13    4.5  12.7    1.9  1  DUF812           Protein of unknown function (DUF812)
        1.3    9.6   9.6       0.93   10.0   0.5    2.3  2  NPV_P10          Nucleopolyhedrovirus P10 protein
        1.4    6.7   7.2        1.7    6.4   7.2    1.1  1  V_ATPase_I       V-type ATPase 116kDa subunit family
        1.6    9.0   9.8        1.3    9.2   0.6    2.1  2  XhlA             Haemolysin XhlA
        1.7    8.9  12.2          3    8.1   5.8    2.1  2  THOC7            Tho complex subunit 7
        6.5    7.1   8.1          2    8.8   0.5    2.9  3  TSC22            TSC-22/dip/bun family
        6.8    6.4   7.6         14    5.4   0.1    2.0  2  dCache_1         Cache domain
        7.6    6.7  11.0         12    6.1  11.0    1.4  1  Fib_alpha        Fibrinogen alpha/beta chain family


Domain annotation for each model (and alignments):
>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.0   8.2   1.3e-22   6.8e-20       3      99 ..      10     106 ..       8     108 .] 0.96

  Alignments for each domain:
  == domain 1  score: 71.0 bits;  conditional E-value: 1.3e-22
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-TT--EEEEETTEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2   3 linkfqqlqqqlqqlaqqikqletqlkelelvleelelldedtkvyklvGdvlvkqdkeevkeeLeerketlekeiktlekqleklekeleelkeel 99 
                  l + +q +q +lq   q ++qle ql+e+++++ e+ +l++d+++yk+vG+vl+kq+k e+   +++r e+++ eik++e+++++l  + e ++ ++
   KHJ32904.1  10 LSEDYQTIQRDLQSTIQSRQQLESQLQENKEIQREFANLANDANIYKMVGPVLLKQEKSEAVVAVDARVEFINNEIKKVEDKIKELSSKSEAIRVQI 106
                  6689*************************************************************************************99988765 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   9.8   1.5e-05    0.0079     146     242 ..       5     105 ..       1     107 [. 0.86

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.5e-05
        Spc7 146 enlegleedkelLekqeeeldellpeleeeka...eleeeleklqeaaeelesidkeeLeelree.laelkaeieekkkelaelqeqleeleekieelk 240
                 +++++l ed+++++++ +   +  ++le++ +   e+++e+++l + a+  + + +  L++ ++e +++++a +e  ++e+++++++++el++k e+++
  KHJ32904.1   5 QQINNLSEDYQTIQRDLQSTIQSRQQLESQLQenkEIQREFANLANDANIYKMVGPVLLKQEKSEaVVAVDARVEFINNEIKKVEDKIKELSSKSEAIR 103
                 567888999999999998888888888877766669**************999******9988653899**************************9987 PP

        Spc7 241 eq 242
                  q
  KHJ32904.1 104 VQ 105
                 65 PP

>> Prefoldin_3  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   7.1   6.2e-05     0.033       4      96 ..       4      97 ..       1     100 [. 0.81

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6.2e-05
  Prefoldin_3  4 lyklreweaeydglkeeisalke...eddateedllriardfegslvtekEveeilGekqgvtrskqQvvdlisrRiDYVkqniktlekrleaaen 96
                  ++ ++ +++y++++ ++++  +   + +++ ++  +i+r+f  +l ++  + +++G     +++k   v +++ R+ ++++ ik +e +++   +
   KHJ32904.1  4 TQQINNLSEDYQTIQRDLQSTIQsrqQLESQLQENKEIQREFA-NLANDANIYKMVGPVLL-KQEKSEAVVAVDARVEFINNEIKKVEDKIKELSS 97
                 5666777889999999988877744455666677789*****6.799**********9877.7888888889****************99987665 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   2.9   0.00084      0.44      47      95 ..       4      51 ..       2      62 .. 0.74
   2 ?    8.8   0.9    0.0031       1.6      83     120 ..      65     102 ..      60     106 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00084
     DUF1664 47 skqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevred 95
                ++q++++se+ ++ +r+L+s i++  ++l++q +  kei++e +++ +d
  KHJ32904.1  4 TQQINNLSEDYQTIQRDLQSTIQS-RQQLESQLQENKEIQREFANLAND 51
                689999999999999999999986.455666666666666666665555 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0031
     DUF1664  83 keikeevtevredlseigedvesvkeavegleskleri 120
                 +e +e v +v   ++ i++++++v++ +++l sk e i
  KHJ32904.1  65 QEKSEAVVAVDARVEFINNEIKKVEDKIKELSSKSEAI 102
                 44556677777777777777777777777777776655 PP

>> Occludin_ELL  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.7   0.00059      0.31      22      67 ..      12      56 ..       4      71 .. 0.86
   2 ?    4.0   0.1      0.16        83      29      53 ..      76     100 ..      72     106 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00059
  Occludin_ELL 22 keYkelhaeleevskkfseLerelkelkegskeykkieeeilqeyk 67
                  + Y++++++l+++ +  ++Le++l+e ke ++e+++++++  + yk
    KHJ32904.1 12 EDYQTIQRDLQSTIQSRQQLESQLQENKEIQREFANLAND-ANIYK 56
                  679************************9999999999988.67666 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.16
  Occludin_ELL  29 aeleevskkfseLerelkelkegsk 53 
                   a++e ++++++++e+++kel+ +s+
    KHJ32904.1  76 ARVEFINNEIKKVEDKIKELSSKSE 100
                   6677778888888888888777766 PP

>> LPP  Lipoprotein leucine-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   3.8     0.055        29      15      32 ..       6      23 ..       3      57 .. 0.58
   2 ?    8.1   0.0    0.0066       3.5       2      29 ..      78     105 ..      77     108 .] 0.85

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.055
         LPP 15 kvdqlssdvnsakaaaqa 32
                ++++ls+d + ++ ++q+
  KHJ32904.1  6 QINNLSEDYQTIQRDLQS 23
                444444444444444443 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0066
         LPP   2 ldeLssqVsqLkskvdqlssdvnsakaa 29 
                 ++ +++++++ ++k+++lss+ ++++ +
  KHJ32904.1  78 VEFINNEIKKVEDKIKELSSKSEAIRVQ 105
                 66799***************99888765 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   7.0   0.00011     0.058     467     554 ..      13     100 ..       2     106 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00011
    Macoilin 467 tlqqlekrLkeekearaslekqLaeekkrkkeeeetaaravalaaasr....secteslkskkreleaeikkLekelklkeeqirelelkvq 554
                   q++++ L++  ++r++le+qL+e+k  ++e  + a+ a    +       +e++e++      ++a ++ +++e+k  e++i+el  k++
  KHJ32904.1  13 DYQTIQRDLQSTIQSRQQLESQLQENKEIQREFANLANDANIYKMVGPvllkQEKSEAV----VAVDARVEFINNEIKKVEDKIKELSSKSE 100
                 4578899************************9999998887665544311114444433....33444444455555555555555544444 PP

>> JIP_LZII  JNK-interacting protein  leucine zipper II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   1.5   0.00017      0.09      33      66 ..       5      38 ..       4      50 .. 0.93
   2 ?    2.7   0.2      0.27   1.4e+02      52      66 ..      81      95 ..      65     106 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00017
    JIP_LZII 33 arvdeLtsereiLreEleslqkakerlesrikel 66
                +++ +L++++++++ +l+s+ +++++les+++e 
  KHJ32904.1  5 QQINNLSEDYQTIQRDLQSTIQSRQQLESQLQEN 38
                5899**************************9985 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.27
    JIP_LZII 52 lqkakerlesrikel 66
                ++++ +++e++ikel
  KHJ32904.1 81 INNEIKKVEDKIKEL 95
                334444444444444 PP

>> PI3K_P85_iSH2  Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1  10.8   0.00084      0.44       8     108 ..       3     103 ..       1     108 [] 0.69

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00084
  PI3K_P85_iSH2   8 kegdleklseklrevskqlqekskeydqlkeeynkiseeiqlkrqaleaFneaikmFeeqiklqekfskea.qehEieklqenleqlksrlkelhs 102
                    k++ +++lse+++ ++ +lq + ++++ql  + ++ ++eiq     l    ++ km    +  qek +  +  ++ +e +++ ++++++++kel s
     KHJ32904.1   3 KTQQINNLSEDYQTIQRDLQSTIQSRQQLESQLQE-NKEIQREFANLANDANIYKMVGPVLLKQEKSEAVVaVDARVEFINNEIKKVEDKIKELSS 97 
                    66777777778888888888877777777777765.567777777777777778888887777777555443466677777777777777777777 PP

  PI3K_P85_iSH2 103 skekLe 108
                    ++e + 
     KHJ32904.1  98 KSEAIR 103
                    777665 PP

>> DUF3416  Domain of unknown function (DUF3416)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3   0.00017     0.091      85     155 ..       8      79 ..       4     106 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00017
     DUF3416  85 eAWvDpfatWrhdlekkveagqdveleleeGarlleraaeraeaaalraaaaal..rddpeerlaaalseeva 155
                 +  +++++t ++dl+  ++  q++e++l+e +++ ++ a+ a+ a++ +++  +  + ++++++ +a +++v+
  KHJ32904.1   8 NNLSEDYQTIQRDLQSTIQSRQQLESQLQENKEIQREFANLANDANIYKMVGPVllK-QEKSEAVVAVDARVE 79 
                 556789*********************************999777777777666542.333333344444443 PP

>> Laminin_II  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   2.4    0.0027       1.4      24      69 ..       5      50 ..       2      55 .. 0.75
   2 ?    5.5   5.0      0.03        16      48      84 ..      65     101 ..      29     107 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0027
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TTT CS
  Laminin_II 24 qnlentkeklseinrsveetnekvkdankairdArrsvkkLeklap 69
                q+++n++e++++i+r+++ t +  +++  ++++ ++  ++  +la+
  KHJ32904.1  5 QQINNLSEDYQTIQRDLQSTIQSRQQLESQLQENKEIQREFANLAN 50
                7899999999999999999999888888877766555555554444 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.03
                 XXXXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH CS
  Laminin_II  48 kdankairdArrsvkkLeklapqLldklkelkqleea 84 
                 +++++a++ +   v  +++++ +++dk+kel  ++ea
  KHJ32904.1  65 QEKSEAVVAVDARVEFINNEIKKVEDKIKELSSKSEA 101
                 3677777777778888888888888887777777665 PP

>> Coat_F  Coat F domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.0   0.00046      0.24      29      61 ..      24      56 ..      22      58 .. 0.91
   2 ?   -1.1   0.0       4.4   2.3e+03       9      34 ..      62      87 ..      61      92 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00046
      Coat_F 29 npelRqtlkqilneeiemqeelfnlmnqkGwYp 61
                + + Rq l ++l+e  e+q+e  nl+n  + Y+
  KHJ32904.1 24 TIQSRQQLESQLQENKEIQREFANLANDANIYK 56
                6677***********************999997 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 4.4
      Coat_F  9 lLsteKsaarnyataitEasnpelRq 34
                lL+ eKs a     a  E+ n e+++
  KHJ32904.1 62 LLKQEKSEAVVAVDARVEFINNEIKK 87
                68889998888888888888888776 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4  10.4    0.0022       1.2       4     105 ..       7     107 ..       1     108 [] 0.79

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0022
                   HHHHHH-HHHHHHHHCCCTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC..CCCTT.S-TCCCCCCCHHHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N   4 iklirenpeavkeklkkRgedkadvdelleldekrrelqveleelqaerNelskeIgk..akkkk.edaeeliaevkelkeelkaleaelkeleael 97 
                   i+ + e+ +++++ l++     +  ++l +  ++ +e+q e+ +l +  N + k +g   +k++k e   ++ a+v+ +++e+k++e++ kel+++ 
    KHJ32904.1   7 INNLSEDYQTIQRDLQST---IQSRQQLESQLQENKEIQREFANLANDAN-IYKMVGPvlLKQEKsEAVVAVDARVEFINNEIKKVEDKIKELSSKS 99 
                   556666777777777644...56667788888899999999999998888.556666511334447999999************************* PP

                   HHHHCTS- CS
  Seryl_tRNA_N  98 eklllaiP 105
                   e++  +iP
    KHJ32904.1 100 EAIRVQIP 107
                   **999998 PP

>> Turandot  Stress-inducible humoral factor Turandot
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   2.9   0.00041      0.22       6      44 ..       2      40 ..       1      51 [. 0.91
   2 ?   -1.3   0.0       4.3   2.3e+03      30      30 ..      67      67 ..      42      93 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00041
    Turandot  6 tkikniqeliaiYekyssslqlspderekldrlireyke 44
                +k ++i++l + Y+ ++ +lq++ + r++l+++++e+ke
  KHJ32904.1  2 EKTQQINNLSEDYQTIQRDLQSTIQSRQQLESQLQENKE 40
                789999999999*************************98 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 4.3
    Turandot 30 d 30
                +
  KHJ32904.1 67 K 67
                2 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   7.3     0.015       8.1      16      56 ..      14      53 ..       2      58 .. 0.75
   2 ?    9.6   1.2    0.0015      0.77      16      58 ..      61     103 ..      52     106 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.015
                XXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXXXXX CS
       DivIC 16 llaykqlkqeiaalqaelaklkaeneeLeaevkdLksdedy 56
                ++++++  q   +  ++l+++ +en+e ++e ++L  +++ 
  KHJ32904.1 14 YQTIQRDLQSTIQSRQQLESQLQENKEIQREFANLA-NDAN 53
                667777777778888888888889999999988885.5554 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0015
                 XXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXXXXXXX CS
       DivIC  16 llaykqlkqeiaalqaelaklkaeneeLeaevkdLksdedyie 58 
                 +l  +++ + ++a  a ++ +++e+++ e+++k+L+s  ++i+
  KHJ32904.1  61 VLLKQEKSEAVVAVDARVEFINNEIKKVEDKIKELSSKSEAIR 103
                 55567888889999999999999************88888886 PP

>> SKA2  Spindle and kinetochore-associated protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   3.3    0.0019         1      45      78 ..       5      38 ..       1      57 [. 0.86
   2 ?    4.5   0.6     0.055        29      44      62 ..      82     100 ..      38     105 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0019
        SKA2 45 erlkkvkeelqaLkeqceellaekkelidkirtt 78
                ++++++ e++q+++++++   +++++l ++++ +
  KHJ32904.1  5 QQINNLSEDYQTIQRDLQSTIQSRQQLESQLQEN 38
                7999***********************9998875 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.055
        SKA2  44 lerlkkvkeelqaLkeqce 62 
                  +++kkv +++++L+++ e
  KHJ32904.1  82 NNEIKKVEDKIKELSSKSE 100
                 2344444444444444444 PP

>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   6.4    0.0012      0.65      10      77 ..       4      73 ..       1      84 [. 0.75
   2 ?    4.3   0.6      0.09        48      13      43 ..      71     101 ..      62     106 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.0012
       Spc24 10 akelsdleselesleselaelkeeleeleeeseekeserve.detllklklYrsLG.ielekdvnkvlir 77
                ++++++l ++ + ++  l++  +  ++le++ +e+++ + e  + +  +++Y+ +G + l+++ +++++ 
  KHJ32904.1  4 TQQINNLSEDYQTIQRDLQSTIQSRQQLESQLQENKEIQREfANLANDANIYKMVGpVLLKQEKSEAVVA 73
                5789999999999999999999999*****9999777776645555788888888535556666666665 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.09
       Spc24  13 lsdleselesleselaelkeeleeleeesee 43 
                 +  +++ +e +++e ++ +++++el+++se+
  KHJ32904.1  71 VVAVDARVEFINNEIKKVEDKIKELSSKSEA 101
                 5556677777788888888888888777665 PP

>> HBM  Helical bimodular sensor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   8.7     0.002       1.1      48      95 ..       5      53 ..       2     105 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.002
                HHHHHHHHHHHHHHHH--SH.HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         HBM 48 kkldelkaqlqklkakfksp.envrlLqeqlalvqeyrksfnelraaye 95
                +++++l++  q++++ ++s  +++++L++ql+ ++e++++f++l++  +
  KHJ32904.1  5 QQINNLSEDYQTIQRDLQSTiQSRQQLESQLQENKEIQREFANLANDAN 53
                789999999999999998764799*******************997654 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   4.8    0.0018      0.92      59      94 ..       5      40 ..       1      54 [. 0.89
   2 ?    6.5   1.6     0.015         8      13      74 ..      39     105 ..      38     108 .] 0.62

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0018
  CENP-F_leu_zip 59 eeieelaeelreleldLvalrsekeeLekelqkkqe 94
                    ++i++l+e  + ++ dL+++ + +++Le +lq+++e
      KHJ32904.1  5 QQINNLSEDYQTIQRDLQSTIQSRQQLESQLQENKE 40
                    89******************************9987 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.015
  CENP-F_leu_zip  13 KeserkadsLkd..kvenLerelemseenqekvil...eaEtskaevetlkeeieelaeelreleld 74 
                     Ke++r+ ++L +   + ++   +   +e+ e+v+     +E   +e+++++++i+el+++ + ++++
      KHJ32904.1  39 KEIQREFANLANdaNIYKMVGPVLLKQEKSEAVVAvdaRVEFINNEIKKVEDKIKELSSKSEAIRVQ 105
                     6666666666652245666666666677766665321145677788888888888888877766655 PP

>> Snapin_Pallidin  Snapin/Pallidin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   8.8    0.0018      0.93      12      89 ..      11      95 ..       3      96 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0018
  Snapin_Pallidin 12 epkldeldeklkelrqsQeeLleqldrlne...kLkeleeaqe.aevlpdlkeyakK...LvnikkrmsslnerlqklkkRaekL 89
                     + + ++++  l++++qs ++L +ql++ +e   ++++l+++++ ++++  +   ++K   +v++  r++ +n+ ++k+++++++L
       KHJ32904.1 11 SEDYQTIQRDLQSTIQSRQQLESQLQENKEiqrEFANLANDANiYKMVGPVLLKQEKseaVVAVDARVEFINNEIKKVEDKIKEL 95
                     5566788999***************98764333999999999999999888777777666999******************9987 PP

>> PspA_IM30  PspA/IM30 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6  10.5    0.0096       5.1      33     121 ..      19     106 ..       4     107 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0096
   PspA_IM30  33 rdmqselakarqalaqviarqkqlerkleeqkeqakklekkAkaALtkgeeeLArealaeikslekqaealetqlaqqrsaveqlrkql 121
                 rd+qs++ ++rq+l++++ ++k+ +r+ ++ +++a+ ++     +L++ + e+  ++ a+ +   +++++ e + +++ s +e +r q+
  KHJ32904.1  19 RDLQSTI-QSRQQLESQLQENKEIQREFANLANDANIYKMVGPVLLKQEKSEAVVAVDARVEFINNEIKKVEDKIKELSSKSEAIRVQI 106
                 5666665.467777777777777777777777777777777777788889999999999999999999999999999999999888776 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   5.2    0.0061       3.2       7      52 ..       4      52 ..       1      72 [. 0.64
   2 ?    5.4   0.4     0.053        28       5      43 ..      66     104 ..      62     107 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0061
                HHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA  7 fdkleeleeqleelleele...elkeelaelleenaeLeleneklrerl 52
                ++++++l+e+ ++++++l+   + +++l++ l+en+e++ e  +l +  
  KHJ32904.1  4 TQQINNLSEDYQTIQRDLQstiQSRQQLESQLQENKEIQREFANLANDA 52
                3556666666666655555111557888888999999999988886654 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.053
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        YabA   5 elfdkleeleeqleelleeleelkeelaelleenaeLel 43 
                 e  +++ +++ ++e +++e+++++++++el  + +++++
  KHJ32904.1  66 EKSEAVVAVDARVEFINNEIKKVEDKIKELSSKSEAIRV 104
                 556677777888888888888888888888887777665 PP

>> FlxA  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3  11.9     0.074        39      16      61 ..       4      48 ..       1      56 [. 0.69
   2 ?    8.7   0.2    0.0033       1.7      16      41 ..      75     100 ..      64     105 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.074
        FlxA 16 asqiasLqkQiknlqkqLkelsesdeltkeekkkqqqliqaQIqql 61
                ++qi++L + ++++q  L++  +s  +  e + +  ++iq +  +l
  KHJ32904.1  4 TQQINNLSEDYQTIQRDLQSTIQS-RQQLESQLQENKEIQREFANL 48
                677777777777777777777777.666666667777777766665 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0033
        FlxA  16 asqiasLqkQiknlqkqLkelsesde 41 
                 +++++ ++++ik++++++kels+++e
  KHJ32904.1  75 DARVEFINNEIKKVEDKIKELSSKSE 100
                 778899****************9844 PP

>> MIP-T3_C  Microtubule-binding protein MIP-T3 C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   3.1      0.11        58      97     150 ..       6      57 ..       1      61 [. 0.45
   2 ?   11.0   1.1   0.00058       0.3      99     140 ..      65     106 ..      63     107 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.11
    MIP-T3_C  97 qaeelaeerrateealeplkaqlaeleeaIkdqkekisnvrakilkNeakiqkl 150
                 q ++l+e  ++ + +l+   +  ++le++++++ke   +  a+ l+N+a+i k+
  KHJ32904.1   6 QINNLSEDYQTIQRDLQSTIQSRQQLESQLQENKEIQREF-AN-LANDANIYKM 57 
                 4444444444444444444444455555555544433332.22.4555555555 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00058
    MIP-T3_C  99 eelaeerrateealeplkaqlaeleeaIkdqkekisnvraki 140
                 +e +e+  a +  +e ++++++++e++Ik+  +k +++r +i
  KHJ32904.1  65 QEKSEAVVAVDARVEFINNEIKKVEDKIKELSSKSEAIRVQI 106
                 556666677788999************************987 PP

>> Peptidase_S49_N  Peptidase family S49 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   3.0   0.00064      0.34      41      85 ..       5      49 ..       1      75 [. 0.82
   2 ?    0.7   0.1      0.95     5e+02      40      66 ..      75     101 ..      54     106 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00064
  Peptidase_S49_N 41 levtkLneeykelkeeleealldeeelkaaekkekkeekeekkae 85
                      ++++L+e+y++++++l++++ ++++l ++ +++k+ ++e ++ +
       KHJ32904.1  5 QQINNLSEDYQTIQRDLQSTIQSRQQLESQLQENKEIQREFANLA 49
                     589**************************9999999888766554 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.95
  Peptidase_S49_N  40 elevtkLneeykelkeeleealldeee 66 
                      + +v+ +n+e k+++++++e   ++e+
       KHJ32904.1  75 DARVEFINNEIKKVEDKIKELSSKSEA 101
                      446677777777777777776666555 PP

>> Prefoldin  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9  12.2     0.088        46      14     114 ..       6     106 ..       2     108 .] 0.68

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.088
                 HHHHHHHHHHHHHHHHHHHTT.-TT-EEEEEEETTEEEEEE--STTEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  14 qlkeaieelektletlktlkkedegkevlvplgaglyvkaevkdtdkvlvdlGagyyveksleeAiellkkkleelekqlekleeeleklkdqittlea 112
                 q++   e+++++   l++ +++ +  e + + +++++ +     +d  + ++   + ++ ++ eA+  ++ ++e +++ ++k+e+++++l+++ + +++
  KHJ32904.1   6 QINNLSEDYQTIQRDLQSTIQSRQQLESQLQENKEIQREFANLANDANIYKMVGPVLLKQEKSEAVVAVDARVEFINNEIKKVEDKIKELSSKSEAIRV 104
                 444444455555555555555555555555555555555444444444444445699999*********************************999998 PP

                 HH CS
   Prefoldin 113 nl 114
                 ++
  KHJ32904.1 105 QI 106
                 75 PP

>> DUF812  Protein of unknown function (DUF812)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5  12.7     0.025        13     337     424 ..       5     104 ..       1     106 [. 0.64

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.025
      DUF812 337 eqieeleskieeleeeikklessikqveeeleeeke...eneelekevklkkktlell.pd........aeeniekLqalveasaqrlvelakqWekhR 423
                 +qi++l++++++++ ++++  +s +q+e++l+e+ke   e ++l+++ ++ k++   l ++         ++ +e  ++++++ +++++el+++ e+ R
  KHJ32904.1   5 QQINNLSEDYQTIQRDLQSTIQSRQQLESQLQENKEiqrEFANLANDANIYKMVGPVLlKQekseavvaVDARVEFINNEIKKVEDKIKELSSKSEAIR 103
                 688888888888888888888888888888887765111334455666666666554434355566555566667777777777777777777777766 PP

      DUF812 424 v 424
                 v
  KHJ32904.1 104 V 104
                 5 PP

>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   3.0      0.14        75      18      56 ..       5      43 ..       2      56 .. 0.61
   2 ?   10.0   0.5    0.0018      0.93      11      47 ..      69     102 ..      57     108 .] 0.72

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.14
     NPV_P10 18 dkVdalqqqvddvqenlpdvtelnekLdaqsaqLaelet 56
                ++++ l++  + +q +l+ + +  ++L++q ++ +e++ 
  KHJ32904.1  5 QQINNLSEDYQTIQRDLQSTIQSRQQLESQLQENKEIQR 43
                455556666666666666655556666666665555554 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.0018
     NPV_P10  11 adikavddkVdalqqqvddvqenlpdvtelnekLdaq 47 
                 +++ avd +V+ +++++++v++++++   l++k +a+
  KHJ32904.1  69 EAVVAVDARVEFINNEIKKVEDKIKE---LSSKSEAI 102
                 57888888888888888888887766...44554444 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   7.2    0.0033       1.7      10     100 ..       6     100 ..       1     106 [. 0.61

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0033
  V_ATPase_I  10 qfrDlnedvnafqrkfvkevrrcdemerklrfleeeieklekavikeeea.....eesleapeekeldeleeelekleeelkelnenleklkkeln 100
                 q+++l+ed +++qr+  + ++  +++e +l+  +e  +++++    + ++        l++++++ +  +++++e +++e+k+++++ ++l+++ +
  KHJ32904.1   6 QINNLSEDYQTIQRDLQSTIQSRQQLESQLQENKEIQREFANLANDA-NIykmvgPVLLKQEKSEAVVAVDARVEFINNEIKKVEDKIKELSSKSE 100
                 78899999999999999999999999999987544444433333333.334666733444455555555555555555555555555555555443 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   3.0      0.09        47      11      46 ..       5      40 ..       2      43 .. 0.88
   2 ?    9.2   0.6    0.0025       1.3       4      41 ..      69     106 ..      66     108 .] 0.78

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.09
        XhlA 11 tkldnleervdkleekaaeaeekiknleedlkkles 46
                ++++nl+e+ ++++++   + ++ ++le +l + ++
  KHJ32904.1  5 QQINNLSEDYQTIQRDLQSTIQSRQQLESQLQENKE 40
                579**************************9987555 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0025
        XhlA   4 erlerietkldnleervdkleekaaeaeekiknleedl 41 
                 e ++ ++++++ ++++++k+e+k  e  +k++ +  ++
  KHJ32904.1  69 EAVVAVDARVEFINNEIKKVEDKIKELSSKSEAIRVQI 106
                 66777888888888888888888888888888877766 PP

>> THOC7  Tho complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.8    0.0056         3      68     106 ..       5      43 ..       2      53 .. 0.93
   2 ?    4.9   0.4     0.055        29      74     102 ..      75     103 ..      61     106 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0056
       THOC7  68 rereryeaekeeieseieavreeieelkaqLeearatra 106
                 ++++++ +++++i++ ++++ ++ ++l++qL+e +++++
  KHJ32904.1   5 QQINNLSEDYQTIQRDLQSTIQSRQQLESQLQENKEIQR 43 
                 7999******************************99876 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.055
       THOC7  74 eaekeeieseieavreeieelkaqLeear 102
                 +a  e i++ei++v+++i+el ++ e+ r
  KHJ32904.1  75 DARVEFINNEIKKVEDKIKELSSKSEAIR 103
                 55566688999999999999988776655 PP

>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.7       1.1   5.9e+02      22      36 ..       6      20 ..       4      39 .. 0.64
   2 ?    1.3   0.5      0.82   4.3e+02      24      41 ..      39      56 ..      20      70 .. 0.57
   3 ?    8.8   0.5    0.0039         2      10      43 ..      72     105 ..      67     108 .] 0.86

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 1.1
       TSC22 22 kIkeLeernseleeE 36
                +I +L e+ ++++++
  KHJ32904.1  6 QINNLSEDYQTIQRD 20
                788888888887775 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.82
       TSC22 24 keLeernseleeENslLk 41
                ke + + ++l ++ +++k
  KHJ32904.1 39 KEIQREFANLANDANIYK 56
                344444555555555555 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0039
       TSC22  10 fAVrEeVevLkekIkeLeernseleeENslLkal 43 
                  AV   Ve   ++Ik  e++++el +  +  + +
  KHJ32904.1  72 VAVDARVEFINNEIKKVEDKIKELSSKSEAIRVQ 105
                 799999******************9998888765 PP

>> dCache_1  Cache domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   7.6      0.29   1.5e+02       5      69 ..       4      63 ..       2      83 .. 0.73
   2 ?    5.4   0.1     0.026        14     135     170 ..      53      88 ..      46      94 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.29
    dCache_1  5 eqaeeqllglaeqlanniedvldslenlaetlasnpslqdlleepnraneasreslqallksilk 69
                +q +++l++  +++  +++++++s+++l  +l +n+++q+ +      n+a+++++  ++  +l 
  KHJ32904.1  4 TQQINNLSEDYQTIQRDLQSTIQSRQQLESQLQENKEIQREFA-----NLANDANIYKMVGPVLL 63
                5778888999999999999999999999999999999987333.....46677776666666554 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.026
    dCache_1 135 pvitiavpiyddsgkfiGvlaadldldnlqdllsni 170
                 +++ ++ p+   + k + v+a+d + +++++ ++++
  KHJ32904.1  53 NIYKMVGPVLLKQEKSEAVVAVDARVEFINNEIKKV 88 
                 5667788999999******************99987 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1  11.0     0.022        12      30     126 ..       7     100 ..       1     106 [. 0.61

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.022
                 CCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  30 ekdvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesneqkiqkLeqdid 126
                  +++++d ++++++l++  +s ++ e+  +e k++ re  + ++   n++k +   l  ++++  e ++a   +++++ n +++ e ki++L ++++
  KHJ32904.1   7 INNLSEDYQTIQRDLQSTIQSRQQLESQLQENKEIQREFANLAN-DANIYKMVGPVLL-KQEK-SEAVVAVDARVEFINNEIKKVEDKIKELSSKSE 100
                 33445555555555555555555555555555555444444444.2555555555555.4444.455667789999999999999999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2385  (0.133025); expected 358.6 (0.02)
Passed bias filter:                      804  (0.0448435); expected 358.6 (0.02)
Passed Vit filter:                       122  (0.00680462); expected 17.9 (0.001)
Passed Fwd filter:                        36  (0.00200792); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              34  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 777.36
//
Query:       KHJ32905.1  [L=2519]
Description: putative cell morphogenesis protein pag1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   5.7e-197  656.0   3.5   5.7e-197  656.0   3.5    2.9  3  MOR2-PAG1_N    Cell morphogenesis N-terminal
      5e-77  259.2   3.8    1.1e-76  258.0   0.8    3.0  3  MOR2-PAG1_C    Cell morphogenesis C-terminal
    7.4e-35  120.0  20.4    1.8e-17   62.4   2.7    4.0  4  MOR2-PAG1_mid  Cell morphogenesis central region
  ------ inclusion threshold ------
       0.12   12.5   0.0        1.1    9.5   0.0    2.4  2  DUF4987        Domain of unknown function


Domain annotation for each model (and alignments):
>> MOR2-PAG1_N  Cell morphogenesis N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.11   5.1e+02     279     365 ..      84     169 ..      63     207 .. 0.66
   2 !  656.0   3.5  1.3e-200  5.7e-197       1     551 []     314     892 ..     314     892 .. 0.95
   3 ?    1.5   0.1     0.024   1.1e+02     478     529 ..    1472    1519 ..    1434    1531 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.11
  MOR2-PAG1_N 279 tpddelleplvqiirfiaskhldfafkniifpllnaelfsssklenlepermiigirAflailsdlekkeqrPpfPtssdasekeed 365
                  ++ +++     qii  i++++ d+   + +f +  ++ +ss+ +++++   ++ +     ++++d  ++++ P+ P ++++ +  +d
   KHJ32905.1  84 IASTSSSPLSPQIIAAIGEERTDVSKVDNLFAITLSTTTSSR-ISSISESPIMTTTPDQALVITDEGTQNKAPKRPGRHQNGKGSND 169
                  344444445569*********************999886565.88888888777776666666666666668999997644333222 PP

  == domain 2  score: 656.0 bits;  conditional E-value: 1.3e-200
  MOR2-PAG1_N   1 eRkslvsiyilcrvLieilkqstkeslteelgekLeeivFkqlkkadpeslsssplrlanwnlfAelLGvlSeirFasVsdrFiaeLeklrke..... 93 
                  eR+s+vsiyilcrvLie+++q+t +++t e +ekLe i+F+qlk+ad+++ls+sp+rlanw lf++lLGv++ei+F+sV++rF+++Lekl+k+     
   KHJ32905.1 314 ERRSMVSIYILCRVLIEVISQCTLAQITIETEEKLEGIIFGQLKSADSDQLSQSPIRLANWSLFSKLLGVMAEINFKSVTERFVTDLEKLQKDitven 411
                  8*********************************************************************************************9999 PP

  MOR2-PAG1_N  94 .askeleaklellirGmrylklkvypeeafeesadFlkslakffeeakgsevkhAyaellselLlpvaasataevnhpkwaeavellypraakmskkp 190
                   +++ele+k+el++ G+++++++v pee++++s+dF+ s++++f +++g+++k+A ++ l++lLlpvaa+a++e+++ kw+e++ ++ pr+a+m  kp
   KHJ32905.1 412 gTNRELEKKMELILGGIKHVRIRVQPEEQWDQSCDFMISMGQIFTQSHGHRLKYACCQALENLLLPVAAQANTEFKVLKWSEFLGTIGPRIASMLIKP 509
                  99999********************************************************************************************* PP

  MOR2-PAG1_N 191 khwnaafpLvttlLCvspkefFlanWlsllesllsklKdkstravalealsrllwvYlyRck.eslntttkkLeeilkllfpkgkrklitpddellep 287
                  +hw++afp+++tlLCvsp + F+++Wl+l+ +l++klKd++ r+++l+++srllw+YlyR + +  + t+kk+ee+lkl+fp g+++++t d++++ep
   KHJ32905.1 510 RHWSVAFPMTATLLCVSPIDSFTTQWLQLILPLQPKLKDRYARPICLQVISRLLWTYLYRAPtDIMSITIKKIEEVLKLIFPVGRKSYLTMDPKSTEP 607
                  *************************************************************88*********************************** PP

  MOR2-PAG1_N 288 lvqiirfiaskhldfafkniifpllnaelfsss...klenlepermiigirAflailsdlekkeq.rPpfPtss...................dasek 362
                  lvqiir+i +k+++f+++++ifpl+n++lf s+   k+e+lepe+++igi+Af+ailsdl+k+e+ rP+fP ++                   d  + 
   KHJ32905.1 608 LVQIIRIISFKYQEFCLRTVIFPLINTDLFFSGrdlKIEQLEPEKIVIGIKAFVAILSDLKKGENgRPSFPLEYppdyhrfvsserapasylmDVPQL 705
                  ***************************9976667888***********************************99*****9999999988777744444 PP

  MOR2-PAG1_N 363 eedllsrpvgtsalsetkkeylakaglkkyyeevskilgkililldqtvGrqlvldeklss..pkt.iaesfsf.rkdd.haavdekqakleLlktai 455
                  +++ +++p++   l++t +       + +yy +++++lg+++i++++++G+q++ldek++s  +kt  ++sfs  r+d+ +a++d kqa++eL++ +i
   KHJ32905.1 706 QTNIETEPSSPI-LTNTLN-----NSIFDYYTKFCEVLGRMTIICESAFGSQAALDEKFNSpvSKTpLSDSFSSsRRDEpQASIDSKQAFYELFNAII 797
                  555555555443.323333.....347899******************************777889********788885779*************** PP

  MOR2-PAG1_N 456 ealPrclpesipfkslielLcrgtvHvdpeiaesaaqaLkaliarqkkrqqvvtgfarfifkfddkyssvsevsmlgseeieslLklyvelLeiWi 551
                  + lPr+  ++ip+++li lLc+gt+H++++iaes++ +Lk+ iarq+++qqv++++++fif+fdd+ys+v e +ml +++i+++L++y++lL iWi
   KHJ32905.1 798 QILPRFQLTDIPINTLISLLCTGTAHSQSNIAESSSCSLKS-IARQSHAQQVLISYSKFIFSFDDRYSTVFECGMLEPNQIKNSLQIYHDLLLIWI 892
                  *****************************************.*****************************************************7 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.024
  MOR2-PAG1_N  478 gtvHvdpeiaesaaqaLkaliarqkkrqqvvtgfarfifkfddkyssvsevs 529 
                    +++ ++ei+ +aa+ L+a ++++++++++++++ + i   +dk+++v+++ 
   KHJ32905.1 1472 TLLSDSSEIRLKAANLLQA-LEEKQEQSSIIQRYKKNI---SDKTRTVYKLA 1519
                   55667899***********.99999999*******999...88888876654 PP

>> MOR2-PAG1_C  Cell morphogenesis C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.26   1.2e+03       8      66 ..    1166    1285 ..    1164    1292 .. 0.66
   2 ?   -1.4   0.0      0.37   1.7e+03     163     206 ..    1867    1910 ..    1866    1915 .. 0.92
   3 !  258.0   0.8   2.5e-80   1.1e-76       1     252 [.    1926    2175 ..    1926    2176 .. 0.99

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.26
  MOR2-PAG1_C    8 vAcLetdfeseFlealelLeklldkldlddpevvevllksqpqkwegd................................................ 55  
                   v  L +++++++   le L+ +++k++  d++ ++v  ++ +++w+++                                                
   KHJ32905.1 1166 VVSLGSINVNIYKILLEELQGVVSKCN--DDAKLRVHRRTTSNSWKNRrtdllrsevahvyqltahflkdpniyqddwivnnivtytndlkqflmd 1259
                   667999******************999..7777888888888899988666666665555555555555555555555555555555555555555 PP

  MOR2-PAG1_C   56 ...............feglqalvlkG 66  
                                  f g+  ++  G
   KHJ32905.1 1260 pevqanwefqklrryFCGVIDCLFEG 1285
                   55555555555555555555555555 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.37
  MOR2-PAG1_C  163 qvvkalreayfpehesealvlllgllengpewlrrktlqiLkvl 206 
                   q+++++ +++   + +++l  l + ++n+ + l++ +++iL  l
   KHJ32905.1 1867 QIFRCVFTSFNLSTLEDMLGKLSKTISNEDSDLQSLSIEILTTL 1910
                   78999999999999999**********************99876 PP

  == domain 3  score: 258.0 bits;  conditional E-value: 2.5e-80
  MOR2-PAG1_C    1 pqlFWttvAcLetdfeseFlealelLeklldkldlddpevvevllksqpqkwegdfeglqalvlkGlrssetleatlellskLtklsddelvdssd 96  
                   pq+FWt++AcL+t++e eF+e + +Le ll+++dl++++v++ + + +p kweg+feglq+l++kGlrss +++ +l++++kL++l++d+l++ +d
   KHJ32905.1 1926 PQIFWTICACLDTVIEIEFQELICMLEVLLTRIDLNNSNVRSLINERRPVKWEGEFEGLQILIYKGLRSSLSMDVSLKMINKLIQLPNDDLIG-ND 2020
                   9********************************************************************************************.89 PP

  MOR2-PAG1_C   97 srllllilalLPrllqaleekeedqkvlevAenlaalaeekglenLarvltsyakgrfrtkddflkqvvkalreayfpehesealvlllgllengp 192 
                   +r+l+ +la++P +l ++e++++d+  le ++ +a++a+++g++++ +vl+sy++ +  t++df++q+++a++e+++p+ ++e +v+l+gll+n+ 
   KHJ32905.1 2021 TRILFVVLANFPSFLYTIEQDSIDSCNLENSRIIAEIAKSHGYTSIFKVLNSYSMLNHWTSKDFIAQLISAIKESFLPRCDFEGFVFLVGLLTNSL 2116
                   9*********************************************************************************************** PP

  MOR2-PAG1_C  193 ewlrrktlqiLkvllqeidlrkpaeisslgsdllspllrlletelcseALeVLdevvsvs 252 
                    w++ ktl+i+++++ eid++kp ei+s  +d++spllrll+t++  +ALeVLd++  vs
   KHJ32905.1 2117 GWFKLKTLDIICAFVAEIDMHKP-EINSQAPDIISPLLRLLQTSYRTQALEVLDHITIVS 2175
                   *********************99.*******************************98776 PP

>> MOR2-PAG1_mid  Cell morphogenesis central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1     0.026   1.2e+02       6      39 ..     925     958 ..     921     977 .. 0.86
   2 !   28.8   1.1   5.5e-11   2.5e-07     185     447 ..    1136    1403 ..    1085    1406 .. 0.75
   3 !   62.4   2.7     4e-21   1.8e-17     487     748 ..    1406    1674 ..    1395    1687 .. 0.81
   4 !   39.7   0.4   2.8e-14   1.2e-10     924    1107 ..    1708    1894 ..    1694    1898 .. 0.82

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.026
  MOR2-PAG1_mid   6 aseldavgliflssvdvqirhtalellrcvralk 39 
                      e++a  l fl+s  +++r  ++ +lr v+ + 
     KHJ32905.1 925 IDEIEAHVLFFLCSQSSKVRALSVTMLRLVKGID 958
                    56899999*********************99875 PP

  == domain 2  score: 28.8 bits;  conditional E-value: 5.5e-11
  MOR2-PAG1_mid  185 edsalkaakelyhlilpslksgseakikaatlalghshlevceimlgelasfleevase....teskpkwksqkarred.lrvhvaniyrmvae 273 
                      + ++++a+ l++ i+p l   s +   +  ++lg   +++ +i+l el+  + +   +    +  ++  +s k rr d lr  va +y++ a+
     KHJ32905.1 1136 AQEKITSARILFKYIVPLLSVSSTSIRSSVVVSLGSINVNIYKILLEELQGVVSKCNDDaklrVHRRTTSNSWKNRRTDlLRSEVAHVYQLTAH 1229
                     35678899***********99999999999*******************9888655554000055666668999999984599*********** PP

  MOR2-PAG1_mid  274 niwpgmlsrkpvlrlhflkfieetvrqiltspsenfqdlqplryalasvlrslapelvdsk...serfdsrtrkrlfdlllswsddtgstwsqd 364 
                      +    + +   +   ++ + ++  + ++ + +++  ++q lr  ++ v+  l   + +s+   s   +   rk  f l+  w+     +  q 
     KHJ32905.1 1230 FLKDPNIYQDDWIVNNIVTYTNDLKQFLMDPEVQANWEFQKLRRYFCGVIDCLFEGI-NSNnnpSRWTNFESRKSTFALMEDWCGF---SINQS 1319
                     *99777777777788999******9999999999999*****999999998886554.443111333456789**********965...55677 PP

  MOR2-PAG1_mid  365 gvsdyrreverykasqnsrskdsvdklsfdkevaeqleaiqwvamnalaallygpcfdd.....narklsgrviswinslflepapra 447 
                      v +   ++ +    q+s  + sv   +++ e       ++ +a+ a+aal  gp         n      r++swin+ +   + r+
     KHJ32905.1 1320 QVRQKEDNIRQSIVDQQSYGEWSVITAAMETEK----RNLRTAALSAMAALCGGPLNLTtespiNLEPDVRRMLSWINTTLSAGSDRM 1403
                     777777788888888999999999877777665....4578899**********9754311112334445789999998877766665 PP

  == domain 3  score: 62.4 bits;  conditional E-value: 4e-21
  MOR2-PAG1_mid  487 lakvalknllqtnld...lfpacidqcyssd.asiadgyfsvlaevymrqeipkceiqrllslilykvvdqsrkirddalqmletlsvrewaed 576 
                     + + alk l+  n d   l+   i +cy ++ + + + yf v+a+v +          r+l++ l+ ++ +s +ir +a ++l++l   e  e+
     KHJ32905.1 1406 VGRKALKSLITHNKDipyLLEYSIARCYIAEnSKVLESYFDVVAQVLLEDPEYSMPFWRILAIGLFTLLSDSSEIRLKAANLLQALE--EKQEQ 1497
                     4689*********9955567899*****98625699************9988888999*************************9884..54555 PP

  MOR2-PAG1_mid  577 geegagryraavvgnlpdsyqqfqyklsaklakdhpelsellceeimqrqldavdiiaqhqvltcmapwienlnflk.lkesgw..serllksl 667 
                      +    ry+  +  +    y+  qy++s+kl++++p+++  +  e      d +  +++ ++l+ + pw + +++    ke     s  +l  l
     KHJ32905.1 1498 -SSIIQRYKKNISDKTRTVYKLAQYEISTKLSQQYPDMTLYIHSEFTAYYKD-LPEVSRRNILAIILPWTQIVKLQTnSKEELKveSFAFLSNL 1589
                     .47899***************************************9887776.567899**********8877654313333331155689999 PP

  MOR2-PAG1_mid  668 yyvtwrhgdqfpdeieklwstvask.rrniipvldflitkgi...edcdsnasaeitgafatyfsvakrvslylaricpqqtidh 748 
                       +++r gd + +e++klw+++ s+ + n+ p l+f+i+  +   e+   n s +i   +a      k +   + ri+p++ i +
     KHJ32905.1 1590 CEISFRSGDTLQNELQKLWQALISHyKANMQPTLNFFISLCLdrrEQHSINLSKQIIAYLANESLEEKLIESLILRITPKNMIAY 1674
                     9******************9987762569**********9882223344466677766666666667888888889999988865 PP

  == domain 4  score: 39.7 bits;  conditional E-value: 2.8e-14
  MOR2-PAG1_mid  924 lsradialillaeiayendedfrehlpllfhvtlvsmdssedivlkhcqdllvnllyslagrhlelyevessdgenkqqvvslikyvqskrgsl 1017
                     ls ++++lill ++     + f ++lpll+h+++   d    iv +++++ll+ l++ l   ++++ ++      +++++  l+  ++ +   +
     KHJ32905.1 1708 LSLCQLSLILLVDLVISPIQLFADNLPLLLHIAISLWDHHISIVQDQVRELLIHLVHELVIAKVDVGKL----IFQRKHIDELVDSIRCHDPKI 1797
                     6778999*************************************************9987666555432....3456789999*********** PP

  MOR2-PAG1_mid 1018 mweneda......tlvrtelpsaallsalvlslvdaiffqg.dlrekwgaealkwamectsrhlacrshqiyralrpsvtsdtcvsllrclhrc 1104
                     +w  ed        l  ++      +  l + ++d+  +    + e+w + +l wa+ c   h+acrs qi+r++  s +  t   +l  l + 
     KHJ32905.1 1798 FWSYEDYigdyvgKLNDSDHRIPLAMGRLTKMVIDSFRLTCpRFLEEWTKFSLSWAISCPVTHIACRSFQIFRCVFTSFNLSTLEDMLGKLSKT 1891
                     *****9632211124444444444567788888888866542688******************************9999988888888877777 PP

  MOR2-PAG1_mid 1105 lgn 1107
                     ++n
     KHJ32905.1 1892 ISN 1894
                     776 PP

>> DUF4987  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.35   1.6e+03     103     140 ..     827     865 ..     816     870 .. 0.76
   2 ?    9.5   0.0   0.00024       1.1      14      40 ..    1795    1821 ..    1789    1838 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.35
     DUF4987 103 vlntaselglvtklnkdl.snvvltwntfifvdndkada 140
                 +   +s ++l +  ++   ++v + + +fif + d  ++
  KHJ32905.1 827 NIAESSSCSLKSIARQSHaQQVLISYSKFIFSFDDRYST 865
                 5667899999999887761556668899*****998765 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00024
     DUF4987   14 pedylqYedyaGdytfklsmyeekvsv 40  
                  p+ +  Yedy+Gdy+ kl++ ++++ +
  KHJ32905.1 1795 PKIFWSYEDYIGDYVGKLNDSDHRIPL 1821
                  566889***************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2519 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       781  (0.0435607); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.23u 0.32s 00:00:01.55 Elapsed: 00:00:00.49
# Mc/sec: 15455.17
//
Query:       KHJ32906.1  [L=73]
Description: hypothetical protein EV44_g3801 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       552  (0.0307881); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.39
# Mc/sec: 566.39
//
Query:       KHJ32907.1  [L=717]
Description: putative nitrogen assimilation transcription factor nit-4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.5e-21   74.8   0.4    1.1e-20   73.8   0.3    1.6  1  Fungal_trans  Fungal specific transcription factor domain
    0.00021   21.3   2.7    0.00049   20.2   2.7    1.5  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.8   0.3   1.2e-24   1.1e-20       2     177 ..     228     393 ..     227     462 .. 0.89

  Alignments for each domain:
  == domain 1  score: 73.8 bits;  conditional E-value: 1.2e-24
  Fungal_trans   2 drffsnfhpqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsLl 98 
                    ++f++ +p f  l k++f++++   +++k +y+s+ll+++ila +++fs+++ ++  ++  + +    +++ +a   i+++ ++++s l+ +q+L+
    KHJ32907.1 228 MLYFTWEYPIFAPLSKDDFMKDF---KNGKRRYCSSLLVNSILAAACRFSSQPRARLIATDPKTA--GDQYFTEA-VRILQSDQDFFS-LTKIQALN 317
                   68*********************...******************************977777765..66666665.44457*******.******** PP

  Fungal_trans  99 llelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrpplld 177
                   +l++ e +++  ++   ++g  vrla ++gLh++ +   +   ++++ +++  r  ++w++F+lD  ++l+ Gr p ++
    KHJ32907.1 318 ILSIREAGCGHSSASIFFSGKSVRLAIEMGLHKDLNITIR---KNSDLKKQTVRLATFWGTFSLDQAWSLCSGRLPQFS 393
                   *************************************995...7899998888999******************99434 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   2.7   5.4e-08   0.00049       8      36 ..       8      34 ..       5      38 .. 0.80

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 5.4e-08
                HCT---STSSSS-HHHHHCTHHHCCCCTC CS
     Zn_clus  8 kkKvKCdakkPaCsnCkklnleCtfyses 36
                k++  Cd++kP C++C++++++C  y  +
  KHJ32907.1  8 KRRGPCDGQKP-CRRCITYGAQCD-YVIP 34
                45555******.***********9.7655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (717 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 4931.08
//
Query:       KHJ32908.1  [L=1088]
Description: putative viral a-type inclusion protein repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.8e-12   44.9   0.8    1.8e-11   43.7   0.8    1.7  1  GRIP          GRIP domain
  ------ inclusion threshold ------
       0.01   16.1  31.1       0.01   16.1  31.1    9.3  8  ATG16         Autophagy protein 16 (ATG16)
      0.018   15.2   1.4      0.018   15.2   1.4    9.5 11  DMPK_coil     DMPK coiled coil domain like
          2    8.0   8.9      0.081   12.5   1.8    2.3  2  DZF           DZF domain


Domain annotation for each model (and alignments):
>> GRIP  GRIP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.7   0.8   4.1e-15   1.8e-11       3      44 .]    1039    1081 ..    1037    1081 .. 0.96

  Alignments for each domain:
  == domain 1  score: 43.7 bits;  conditional E-value: 4.1e-15
        GRIP    3 nleYLKNVllqFLeskeaserkqLv.pVlstlLkfspeEeqkl 44  
                  +  YLK+++lqFLe+k+ s+++ Lv +Vl +lLkf+++E++++
  KHJ32908.1 1039 DYVYLKTIMLQFLEHKDRSVQESLVkTVLKQLLKFDSKEQERW 1081
                  678*************************************998 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   1.5      0.26   1.1e+03      27      67 ..      13      54 ..       8      69 .. 0.44
   2 ?    4.0   5.6     0.011        50      67     143 ..     241     322 ..     128     331 .. 0.71
   3 ?    4.8   7.8    0.0064        28      75     126 ..     347     398 ..     328     409 .. 0.74
   4 ?    1.2   6.0     0.083   3.7e+02      76     144 ..     402     470 ..     391     486 .. 0.74
   5 ?    0.7   1.2      0.12   5.3e+02     104     130 ..     525     551 ..     507     577 .. 0.77
   6 ?    2.0  16.7     0.047   2.1e+02      75     180 ..     584     702 ..     573     706 .. 0.63
   7 ?   16.1  31.1   2.3e-06      0.01       3     167 ..     686     850 ..     684     866 .. 0.89
   8 ?   -2.9  20.2       1.5   6.8e+03      51     175 ..     892    1020 ..     850    1028 .. 0.65

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.26
       ATG16 27 Lldrtsaleae.naklekaaasakssksskksakekeasasq 67
                +++ ++ ++a  na ++++ +s++ ++s k  + +++++++q
  KHJ32908.1 13 IAEEQARQKALaNAPISRSLSSSSRTESRKDHSPKQKSEKRQ 54
                444444444430333333333333333333333333333333 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.011
       ATG16  67 q.....snskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdre 143
                       s+ ++++++++l+++ ++  +   e   +++++++ l + ++el  l+e++k++++++ +l++++++le ++ ++e
  KHJ32908.1 241 GeslmkSTIVTTSSSPTLTSESHTPFANKVEEEIRCSDTNEELFSYEDELPLLKEEIKAKNSEIVDLKSKVSRLENEILSLE 322
                 1234445556666666666666666666666666788888888889999999999999999999999999998888876655 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.0064
       ATG16  75 kiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerla 126
                 k q++++k+ ++ ee ++l k  +++++++ +ln+el+++ ++ ++  + ++
  KHJ32908.1 347 KDQNDTKKIEAQEEEIKKLKKGLQDSNSQISKLNAELETKTKEYEKHVSLVE 398
                 5678888888888888888888888888888888888888887776655554 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.083
       ATG16  76 iqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdree 144
                 +++ +++ ++l+e la+++ks ++ ++ +++++   q+++++lk  +   +e e+ +++ + ++ d ee
  KHJ32908.1 402 TNQKNNLDIALQESLATSHKSEAHCEYLVKKVEILEQARDSNLKLLQDLTNEFENLVNSRQIQYTDVEE 470
                 55566667899**************99999988888888877777776666666666666666655554 PP

  == domain 5  score: 0.7 bits;  conditional E-value: 0.12
       ATG16 104 llelneelqkleeklkedeerlaelea 130
                 l++ ++ ++k e+++++++++lael++
  KHJ32908.1 525 LIDIKANIRKIESEIRNQSNELAELKE 551
                 677777788888888888888888764 PP

  == domain 6  score: 2.0 bits;  conditional E-value: 0.047
       ATG16  75 kiqsleqklaqlreelaelyks...rgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvq..........dlqDEl 160
                 + q l++k+++l e+l++l        +l+  l++l+++ ++l+ ++ + e  l ++++   +  + l d++e l+  +  +           +++DE 
  KHJ32908.1 584 ENQRLKEKILKLEEDLKTLSLDfedVRKLQANLKDLTTKFDELKLSSAALEIDLGAAQQLAISRYKDLTDLRELLQKIQPELTrlrtenadlkNVKDEK 682
                 445566666666666666655411134466667777777777776666666666666655555555555555555544444445555666777****** PP

       ATG16 161 saLqlqlnqaEeklrklekE 180
                 ++L l+l+  E + ++l+ E
  KHJ32908.1 683 VTLSLELKGSETREKDLKIE 702
                 ***************99976 PP

  == domain 7  score: 16.1 bits;  conditional E-value: 2.3e-06
       ATG16   3 laqLreRdarqekafaeliqaynrLldrtsaleaenaklekaaasakssksskksakekeasasqsnskqsakiqsleqklaqlreelaelyksrgela 101
                 + +L+  + r++++  e+++  +++ d +s+ ++ n+kl+ + +s+   + +++ a+++++++++++ + +a +++l+++l+  +ee a+l  +  +l+
  KHJ32908.1 686 SLELKGSETREKDLKIEIVSLKKQIVDFQSEIRTLNEKLKHENSSRLRAEDQQNIAQRDLRKSEAEKIQYAAASEKLASNLSNAQEETAKLNIQVRDLS 784
                 568999999******************************988888887777788888888888888999999999999999999999999999999999 PP

       ATG16 102 qrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlql 167
                 +r+  ln e ++lee+ + + ++ ++ +a  +++++++ + +++l+e e+  + l +Els  q  l
  KHJ32908.1 785 ERVSVLNVENKRLEEEVELRGSQNENSQALLTSMRDQVGEMAMQLKEAEAQSESLSEELSEVQRLL 850
                 999999999999999999999999999999999999999999999999999999999999888555 PP

  == domain 8  score: -2.9 bits;  conditional E-value: 1.5
       ATG16   51 sksskksakekeasasqsnskqsakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelr 147 
                   + + +  ++++a++ +   + ++++++le  l++  ++   l ++  e +q+  +l+ + +   ++ +e + ++++l++     e+++k  e++  
  KHJ32908.1  892 AEDKVSIISRRKAKEFD---EIKNRLSELELDLQRSSQDKLRLERAEIEWKQKFDDLKVSSENMAKEVEEIRVAMNQLRNALDGSEKAVKLAEKQKL 985 
                  22223333333333333...45667777777777777777777777777777777777777777777777777777777777777777766666655 PP

       ATG16  148 ekeklvq.......dlqDElsaLqlqlnqaEeklr 175 
                  +++k ++       +l+ E+ aL+l+l+++ e ++
  KHJ32908.1  986 DLRKILDesnhrhdKLHKEYKALHLKLTKLSEGSD 1020
                  55555556666666*************99877665 PP

>> DMPK_coil  DMPK coiled coil domain like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       1.4   6.3e+03       6      15 ..     293     302 ..     292     320 .. 0.64
   2 ?    0.4   7.6      0.16   7.2e+02       4      55 ..     356     408 ..     355     415 .. 0.86
   3 ?   -0.5   0.6      0.31   1.4e+03      29      58 ..     407     436 ..     395     440 .. 0.75
   4 ?   -2.5   0.4       1.3   5.9e+03      36      53 ..     536     551 ..     527     553 .. 0.62
   5 ?   -2.3   2.2       1.1   5.1e+03      40      56 ..     584     600 ..     561     612 .. 0.71
   6 ?   15.2   1.4     4e-06     0.018      19      60 ..     674     715 ..     667     716 .. 0.93
   7 ?   -2.1   1.9      0.97   4.3e+03      21      55 ..     751     787 ..     737     802 .. 0.73
   8 ?    3.6   8.3     0.016        73      19      55 ..     814     850 ..     794     857 .. 0.73
   9 ?   -0.9   0.2      0.41   1.9e+03      41      51 ..     875     885 ..     870     894 .. 0.58
  10 ?   -0.5   1.3       0.3   1.3e+03      26      58 ..     934     966 ..     916     969 .. 0.62
  11 ?   -2.2   0.1         1   4.6e+03      21      49 ..     964     992 ..     959    1003 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.4
   DMPK_coil   6 LeaEirakQs 15 
                 L +Ei+ak s
  KHJ32908.1 293 LKEEIKAKNS 302
                 5566666654 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.16
   DMPK_coil   4 sALeaEir.akQslqeeLekvkaanlafeskLkeaEkknreLeeeleqLkkem 55 
                 +A e+Ei+  k +lq+   ++ + n + e k ke Ek     eeel + k+++
  KHJ32908.1 356 EAQEEEIKkLKKGLQDSNSQISKLNAELETKTKEYEKHVSLVEEELTNQKNNL 408
                 688999973599*************************9999999999887776 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.31
   DMPK_coil  29 afeskLkeaEkknreLeeeleqLkkemEel 58 
                 + +  L+e+ + +   e++ e L k++E l
  KHJ32908.1 407 NLDIALQESLATSHKSEAHCEYLVKKVEIL 436
                 456679*****************9999975 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 1.3
   DMPK_coil  36 eaEkknreLeeeleqLkk 53 
                 e+E +n+   +el++Lk+
  KHJ32908.1 536 ESEIRNQS--NELAELKE 551
                 67777773..56666665 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 1.1
   DMPK_coil  40 knreLeeeleqLkkemE 56 
                  n+ L+e++ +L +++ 
  KHJ32908.1 584 ENQRLKEKILKLEEDLK 600
                 46666666666666664 PP

  == domain 6  score: 15.2 bits;  conditional E-value: 4e-06
   DMPK_coil  19 eLekvkaanlafeskLkeaEkknreLeeeleqLkkemEelra 60 
                  L++vk+ ++  +  Lk +E + ++L+ e+ +Lkk++  +++
  KHJ32908.1 674 DLKNVKDEKVTLSLELKGSETREKDLKIEIVSLKKQIVDFQS 715
                 699********************************9988876 PP

  == domain 7  score: -2.1 bits;  conditional E-value: 0.97
   DMPK_coil  21 ekvk..aanlafeskLkeaEkknreLeeeleqLkkem 55 
                 ek++  aa+ +  s L +a      L+ +++ L +++
  KHJ32908.1 751 EKIQyaAASEKLASNLSNAQEETAKLNIQVRDLSERV 787
                 5555224556677888888888888888888888886 PP

  == domain 8  score: 3.6 bits;  conditional E-value: 0.016
   DMPK_coil  19 eLekvkaanlafeskLkeaEkknreLeeeleqLkkem 55 
                  L+  ++   ++  +LkeaE+++  L eel + ++ +
  KHJ32908.1 814 LLTSMRDQVGEMAMQLKEAEAQSESLSEELSEVQRLL 850
                 47777777778899***************99988655 PP

  == domain 9  score: -0.9 bits;  conditional E-value: 0.41
   DMPK_coil  41 nreLeeeleqL 51 
                  reL+e++e  
  KHJ32908.1 875 IRELQEKMEAA 885
                 44444444443 PP

  == domain 10  score: -0.5 bits;  conditional E-value: 0.3
   DMPK_coil  26 anlafeskLkeaEkknreLeeeleqLkkemEel 58 
                 a+++   k  +  + + ++ +e+e+++  m +l
  KHJ32908.1 934 AEIEWKQKFDDLKVSSENMAKEVEEIRVAMNQL 966
                 555555555666666666666666666666555 PP

  == domain 11  score: -2.2 bits;  conditional E-value: 1
   DMPK_coil  21 ekvkaanlafeskLkeaEkknreLeeele 49 
                 ++ ++a    e   k aEk+  +L + l+
  KHJ32908.1 964 NQLRNALDGSEKAVKLAEKQKLDLRKILD 992
                 56666666677778889999999987665 PP

>> DZF  DZF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.8   1.8e-05     0.081      20     164 ..     249     397 ..     241     418 .. 0.80
   2 ?   -3.4   0.8       1.3   5.8e+03      39     109 ..     917     992 ..     890    1011 .. 0.55

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.8e-05
                 EEEESS--B..HHHHHHHHHHHHHHGGGT--SEEEEET.TTEEEEEESSSS--EEEEEEE-HHHHHHHHHHHTT--------STB--HHHHHHHHHHHH CS
         DZF  20 vvllktlPt..kelvdklakkveedlktstkkeilqsv.ealevikntkesqlekgieitssvvkvrlliallpeelrklepekhLDskkilsalasiR 115
                 +v  ++ Pt   e     a+kvee+++ s+ +e l s  + l + k++ + + +  +++ s+v + + +i  l  +++ +  +k++D   + +++++++
  KHJ32908.1 249 IVTTSSSPTltSESHTPFANKVEEEIRCSDTNEELFSYeDELPLLKEEIKAKNSEIVDLKSKVSRLENEILSLEINSKINGNLKKIDGDSVEANVFTMK 347
                 556666675225777889************9977777658888999999999999******************************************** PP

                 HHHHHHHHTTTSTTHHHHHHHHHHHHHH-GGGG.GGTTHHHHHHHHHHHH CS
         DZF 116 HakWFeeraselksikvliRvLkDlarRfdtfk.PLsaWildllaekaia 164
                   +  +++  + ++ik l + L+D  + +++ +  L++ + ++  + ++ 
  KHJ32908.1 348 DQNDTKKIEAQEEEIKKLKKGLQDSNSQISKLNaELETKTKEYEKHVSLV 397
                 99999998888889999999999999998887524666666666666655 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.3
                 HHHHGGGT--SEE.EEET..TTEEEEEESSSS--EEEEEEE-HHHHHH.HHHHHTT.--------STB--HHHHHH CS
         DZF  39 veedlktstkkei.lqsv..ealevikntkesqlekgieitssvvkvr.lliallp.eelrklepekhLDskkils 109
                 +e dl+ s ++++ l+ +  e  ++ ++ k+s  +++ e+ +  v  + l  al + e+  kl  +++LD +kil 
  KHJ32908.1 917 LELDLQRSSQDKLrLERAeiEWKQKFDDLKVSSENMAKEVEEIRVAMNqLRNALDGsEKAVKLAEKQKLDLRKILD 992
                 5666666666633233331244455555555555555555554444330333443324555667777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1088 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2502  (0.13955); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                       136  (0.00758548); expected 17.9 (0.001)
Passed Fwd filter:                        77  (0.00429472); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 2.62u 0.40s 00:00:03.02 Elapsed: 00:00:00.71
# Mc/sec: 4616.65
//
Query:       KHJ32909.1  [L=362]
Description: putative protein lunapark-b protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.7e-20   70.8   0.3    9.5e-20   70.1   0.3    1.4  1  zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal
  ------ inclusion threshold ------
      0.067   13.1   0.4       0.64   10.0   0.0    2.4  2  Sec20           Sec20
       0.07   13.5   0.1       0.22   11.9   0.0    1.8  2  CCDC-167        Coiled-coil domain-containing protein 167


Domain annotation for each model (and alignments):
>> zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.1   0.3   1.6e-23   9.5e-20       1      54 []     241     297 ..     241     297 .. 0.98

  Alignments for each domain:
  == domain 1  score: 70.1 bits;  conditional E-value: 1.6e-23
  zinc_ribbon_10   1 wfDrvldvLvGddetsaknryalICskChshnGlap..keeleev.kyrCpkCgaln 54 
                     w+Dr+ld+L+G+det+ knr+ lIC++C+  nG+ap  +++le++ k+rC++C+++n
      KHJ32909.1 241 WYDRILDILLGEDETLPKNRLVLICQHCRLINGQAPpgTKSLENLgKWRCYSCNSMN 297
                     9*************************************99***************98 PP

>> Sec20  Sec20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00011      0.64       9      47 ..      16      54 ..      10      65 .. 0.86
   2 ?    0.2   0.2      0.12   7.1e+02      14      50 ..     107     145 ..     102     152 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00011
       Sec20  9 slraisqllsqevqqSeenleeldastkslekleeeykq 47
                s+ +i + l+ ++ +Se+ le+l++s+++ ++l   y+ 
  KHJ32909.1 16 SFEKILAALATKISKSEIHLENLRSSSRKYKALWTLYTT 54
                56778899********************99888776665 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.12
       Sec20  14 sqllsqevqqSeenleeldastk..slekleeeykqved 50 
                 +qll ++  +  +++e+l+a tk  + ++l e+y qv++
  KHJ32909.1 107 KQLLEEQQTERFKTIEKLKAATKynTTHELLEKYGQVSS 145
                 566666666666788888887752245556677777654 PP

>> CCDC-167  Coiled-coil domain-containing protein 167
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.6e-05      0.22      38      82 ..      15      59 ..       8      60 .. 0.89
   2 ?   -3.5   0.1       2.4   1.4e+04      23      31 ..     106     114 ..      99     129 .. 0.54

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.6e-05
    CCDC-167 38 esleeEeaslkeqleenekeLksLrkeNrksmllsvalllvlaLv 82
                 s+e+ +a+l +++++ e  L++Lr   rk  +l  + ++ l+L+
  KHJ32909.1 15 ASFEKILAALATKISKSEIHLENLRSSSRKYKALWTLYTTFLYLF 59
                5899**************************999998888888875 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.4
    CCDC-167  23 verrlrkee 31 
                 v + l++++
  KHJ32909.1 106 VKQLLEEQQ 114
                 333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       931  (0.051927); expected 358.6 (0.02)
Passed bias filter:                      652  (0.0363657); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 2727.30
//
Query:       KHJ32910.1  [L=347]
Description: putative short chain dehydrogenase reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.6e-37  127.1   0.7    8.3e-37  126.5   0.7    1.2  1  adh_short     short chain dehydrogenase
    6.8e-30  104.3   0.1      9e-30  104.0   0.1    1.1  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
    1.5e-10   41.3   3.6    8.9e-10   38.8   3.6    2.0  1  KR            KR domain
     0.0074   15.7   0.1      0.011   15.1   0.1    1.2  1  DUF1776       Fungal family of unknown function (DUF1776)
  ------ inclusion threshold ------
      0.044   13.2   0.1      0.056   12.9   0.1    1.3  1  Epimerase     NAD dependent epimerase/dehydratase family


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.5   0.7   2.3e-40   8.3e-37       2     190 ..      91     272 ..      90     276 .. 0.95

  Alignments for each domain:
  == domain 1  score: 126.5 bits;  conditional E-value: 2.3e-40
                 EEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGCSHHH CS
   adh_short   2 vvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfselseee 100
                 ++++tG+++G+G+ +a+ +  +Ga+vvv+d+++ ++     e++     ++a+++Dv+d+e+v ++  +++ ++g+  +L+nNA++ + ++  +ls ee
  KHJ32910.1  91 IIVITGGAGGLGLLMAEVYGMRGATVVVLDIRDLEA----GEVRG----VTAYKCDVSDKEQVAKIALEIERDFGTPTILINNAAVVNGKSLLDLSIEE 181
                 79*****************************97766....56665....99************************************************ PP

                 HHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGT.EEEEEEEESSBSSHHHHHH CS
   adh_short 101 wervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptg.irvnavaPGlvdTdmakel 190
                 +e+++ vNl + f + +++lp m+++ sG+Iv++sSv +  + a+++ Y+A+Ka+++++ +sl  el++t  i+ + v PG + + +  ++
  KHJ32910.1 182 IENCVRVNLLSQFYTLKTFLPGMIRAGSGTIVTISSVLSSLGAASLSDYTATKAGITAMHKSLTAELKSTPnIKTVLVSPGQIGSSLFSSV 272
                 ********************************************************************9977**********998877665 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.0   0.1   2.5e-33     9e-30       2     187 ..      97     277 ..      96     306 .. 0.92

  Alignments for each domain:
  == domain 1  score: 104.0 bits;  conditional E-value: 2.5e-33
                   TTTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTTSEEEE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHHHHH CS
  adh_short_C2   2 aasgIGraiAkalaeeGaevvltdlneeakkrveelaeelgaevlecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsreefdra 98 
                    a g+G  +A+ +  +Ga+vv+ d+++ ++ +v+      g ++++cDV+d+eqv++++ e++++fg+  il+nna++++   +++l++s ee+++ 
    KHJ32910.1  97 GAGGLGLLMAEVYGMRGATVVVLDIRDLEAGEVR------GVTAYKCDVSDKEQVAKIALEIERDFGTPTILINNAAVVNG--KSLLDLSIEEIENC 185
                   5789************************955555......4567*************************************..************** PP

                   HHHHTHHHHHHHHHHHH.HCTSC.CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGG.GTEEEEEEEE--BHCTGGGGSTTHHH CS
  adh_short_C2  99 ldvnlyslfllakaalp.lmkeg.gsivnlssvgaervvpnynaygaaKaalealtrylAvelgp.kgiRvNavspgpikTlaasgikgfde 187
                   + vnl s f+++k +lp ++++g g iv++ssv ++ + ++ + y+a+Ka++ a+ ++l +el +  +i+   vspg i   + s++k  ++
    KHJ32910.1 186 VRVNLLSQFYTLKTFLPgMIRAGsGTIVTISSVLSSLGAASLSDYTATKAGITAMHKSLTAELKStPNIKTVLVSPGQIGSSLFSSVKTPNS 277
                   *****************9888889***************************************9878************9999988887554 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   3.6   2.5e-13   8.9e-10       4     165 ..      93     246 ..      91     260 .. 0.86

  Alignments for each domain:
  == domain 1  score: 38.8 bits;  conditional E-value: 2.5e-13
                 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-.EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT-- CS
          KR   4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealga.evevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleemt 101
                 +itGG+GgLGl +a+    +ga+ +vl  R+             lea ++  v+++++Dvsdk++v+++  ei++++++ +  i+ A v++ k l +++
  KHJ32910.1  93 VITGGAGGLGLLMAEVYGMRGATVVVLDIRD-------------LEAGEVrGVTAYKCDVSDKEQVAKIALEIERDFGTPTILINNAAVVNGKSLLDLS 178
                 8**************************8888.............33333326999**********************999999**************** PP

                 HHHHHHHHTTTTHHH.HHHHHHTTT...S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHH CS
          KR 102 aedleqvlapKvkGa.wnLhelled...esldffvlfSSiagllgsagqanYaaaNaflDalaeyrrs 165
                  e++e++++  +      L+++l+         +v++SS+ + lg+a  ++Y+a+ a + a+ ++ ++
  KHJ32910.1 179 IEEIENCVRVNLLSQfYTLKTFLPGmirAGSGTIVTISSVLSSLGAASLSDYTATKAGITAMHKSLTA 246
                 *********998776156777777677677889**********************9999888776655 PP

>> DUF1776  Fungal family of unknown function (DUF1776)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   3.2e-06     0.011     111     199 ..     177     263 ..     171     278 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3.2e-06
     DUF1776 111 iplsswaselnerllspiltlqallplltsrakqkakiivvnpsissslnlpfhapEalvssalsalfevLkrelr.phnidvtqikLGn 199
                 ++++++++ +  +lls + tl+ +lp +       + +iv   s++ssl ++  +  + +   ++a+ ++L++el+   ni+++ +  G 
  KHJ32910.1 177 LSIEEIENCVRVNLLSQFYTLKTFLPGMIR---AGSGTIVTISSVLSSLGAASLSDYTATKAGITAMHKSLTAELKsTPNIKTVLVSPGQ 263
                 678899999******************997...7899999***********************************955577777665555 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   1.6e-05     0.056       1      74 [.      92     169 ..      92     247 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.6e-05
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHCEEEE--TT-HHHHHHHHHHH.....T-SEEEE--S.- CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledlelveldltdrsalerlfkee.....qpdavihlAa.v 74 
                 i++tG++G +G  +++    +g +v++ld +  + + ++ + ++ +++d+ d+++++++  e       p++ i+ Aa v
  KHJ32910.1  92 IVITGGAGGLGLLMAEVYGMRGATVVVLDIR--DLEAGEVRGVTAYKCDVSDKEQVAKIALEIerdfgTPTILINNAAvV 169
                 89***************************99..4444444555***********99988644310013466666666644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2701.92
//
Query:       KHJ32911.1  [L=642]
Description: putative key lime pathogenicity protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        6.3    6.9   7.3         14    5.8   0.2    2.8  2  zf-BED    BED zinc finger


Domain annotation for each model (and alignments):
>> zf-BED  BED zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   2.1    0.0056     1e+02      13      43 ..     378     408 ..     372     409 .. 0.79
   2 ?    5.8   0.2   0.00076        14      18      43 ..     435     460 ..     433     461 .. 0.96

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.0056
                 GSS--EETTTTEE----SSTHHHHHHHHHS- CS
      zf-BED  13 keqkavCryCgkilsrgggttnLkrHLrrkH 43 
                 k+ ++ Cr+C+    + +g + L+rH  r H
  KHJ32911.1 378 KHRRVHCRFCNSHPEGFRGEHELRRHHDREH 408
                 5899******998888888888888866665 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.00076
                 EETTTTEE----SSTHHHHHHHHHS- CS
      zf-BED  18 vCryCgkilsrgggttnLkrHLrrkH 43 
                 +C+ C  + +  +   n  +HLrr+H
  KHJ32911.1 435 QCKACSQQMKKYNAYYNAAAHLRRAH 460
                 6************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (642 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4665.17
//
Query:       KHJ32912.1  [L=580]
Description: putative aflyc glca glucosidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.9e-113  379.5   0.4   3.8e-113  378.5   0.0    1.6  2  Alpha-amylase    Alpha amylase, catalytic domain
      4e-07   30.1   0.0    7.8e-07   29.1   0.0    1.5  1  Malt_amylase_C   Maltogenic Amylase, C-terminal domain
  ------ inclusion threshold ------
      0.012   14.8   0.0       0.02   14.0   0.0    1.3  1  hDGE_amylase     Glycogen debranching enzyme, glucanotransfer
        0.1   13.1   0.0       0.39   11.2   0.0    2.0  1  Alpha-amylase_C  Alpha amylase, C-terminal all-beta domain


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  378.5   0.0  8.5e-117  3.8e-113       1     334 [.      35     391 ..      35     394 .. 0.98
   2 ?   -1.8   0.1      0.38   1.7e+03     188     233 ..     403     449 ..     389     472 .. 0.67

  Alignments for each domain:
  == domain 1  score: 378.5 bits;  conditional E-value: 8.5e-117
                    --CHHHHCTCCCCCCCT-SCEEE-B-CE-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCCCHCCHHSTTSGGG CS
  Alpha-amylase   1 GDLkGiiekLdYlkeLGvtaiwlsPifkspqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehewfkeslkkkgepkr 96 
                    GD+ Gii+kLdY+k+LG++++w++Pif+spq d+gYdi++y+ i+p +Gt +d++eLi+++h++gik+++DlVvNHtsd+h wfkes k+k++++r
     KHJ32912.1  35 GDIPGIISKLDYIKSLGIDVVWICPIFASPQVDYGYDISNYKDIYPPYGTLADVDELIKQCHSRGIKILMDLVVNHTSDQHIWFKESKKSKTNEYR 130
                    9*********************************************************************************************** PP

                    CCC-E..........ESS-STTC-TTTTCSCEECTTTTCEEESSS-TTS-BB-TTTCCCCCCCCCCCCCCCTTT-SEEEETTCCCTTTCCCC.... CS
  Alpha-amylase  97 dyyiwkegk....eekeppnnwkslfdgsaweydekaqeyylhlflkklpdLnteneevrkelkdvvkfwlekgidGfRlDvvkhvskveal.... 184
                    d+yiw+++k    +e++ppnnw  + +gsaw+yde+++eyylhlf+ ++pdLn+en++vr ++ d+++fwl++g+dGfR+Dv++ +skv++l    
     KHJ32912.1 131 DFYIWRKPKydknGERQPPNNWAAAWGGSAWKYDETTDEYYLHLFSPEQPDLNWENPKVRDAVHDIIRFWLKRGADGFRMDVINFISKVPELpdae 226
                    ***********9999**************************************************************************999**** PP

                    ..............HCCHCCHHHHHHHHHHHTCCGTT-EEEEE-.TT-SCCCHCCCC-CGG-SICECCITTCGGGCC-CTSTTSB-SS-HHHHHHH CS
  Alpha-amylase 185 ..............esngeflheftqalnetvasrkevmtvgEv.ssdasedlrvyttearlelemvldfphldvaqkakikeqlksisakklkel 265
                                     g++lhe+ +a+ +   ++++++ vgE+ + ++ ++  + +  ++ el+m+++f+ +d++ ++  k    + ++  lk +
     KHJ32912.1 227 ivfphtpwqpgqkyFACGPRLHEYLKAIGKIL-NEYNAFSVGEMpFVEDPKEIIKAVASDQGELKMIFHFEIVDMDFGVLGKFSPGQWKMSILKGI 321
                    ************99999************886.9999******9567888899999999************************************* PP

                    HHHHHHHS-CCCTTCEEES--TTS--HHHHTTSSTTTT.HHHHHHHHHCCCTSSSEEEEETTCCCT---- CS
  Alpha-amylase 266 lkkwlkaleeaaeeavtflgnHDqeRilsrlgddsaea.ekklklaaillltlrGvpviYyGeEigmtgg 334
                    ++kw++ + +++ +++++l+nHDq+R++sr+g+d +e+ + ++k++a++l + +G+ +iY+G+Eigm + 
     KHJ32912.1 322 VNKWQNFMIDNKGWNANYLENHDQSRSVSRWGSDDPEYrVVCAKMFATFLALQSGTVFIYQGQEIGMINI 391
                    ************************************999****************************996 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.38
                    HCCHHHHHHHHHHHTC.CGTT-EEEEE-TT-SCCCHCCCC-CGG-SI CS
  Alpha-amylase 188 geflheftqalnetva.srkevmtvgEvssdasedlrvyttearlel 233
                     e+l+ ++  +    + ++ +++t++E+++++++++r+ ++ + +++
     KHJ32912.1 403 IETLNAWNDMMRDHPDdKELHRITMEEIQKKSRDNARTPMQWDTSKY 449
                    55566666666655555566778888888888887776665555544 PP

>> Malt_amylase_C  Maltogenic Amylase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.0   1.8e-10   7.8e-07       1      72 [.     501     571 ..     501     573 .. 0.88

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 1.8e-10
                     -EEEE---S-TTEEEEEEEETTEEEEEEEESS-EEEEE--G.GGTT-EEEETTTTEE-----SSEEEEE-TT- CS
  Malt_amylase_C   1 GsfefleadnrkvlaYlReyedetilvvaNrsaqaveldls.elagrvpvelfggeefpaigelytltLppyg 72 
                     Gsf +++ +n++v+a+lR+ ed+ +lv+ N+  ++  ++++ e++ +  + l+++   + +g++  l L p++
      KHJ32912.1 501 GSFMIVDYENQDVFAFLRRFEDQSVLVLSNFRSREIRWKIPnEFNLQSDKILISNYDTKFNGDT--LILRPFE 571
                     99**********************************9999999998888888888888888886..7777766 PP

>> hDGE_amylase  Glycogen debranching enzyme, glucanotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   4.4e-06      0.02      26     113 ..      42     121 ..      31     129 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.4e-06
                   HHHHHHHHTT--EEEES--EEE-TT--TTSEEEEEEE-TTT-.....SSC.HHHHHHHHHHHHHH--EEEEEE--SEEETT-CCCCC- CS
  hDGE_amylase  26 kvlkeikekgYnmiHftPlqelGesnSpYSiadqleldkelfeekdkeekeedveklvkklekeygllsltDvVlnHtannskwleeh 113
                   ++l+ ik+ g +++  +P+ +  + +  Y i++  ++ +          + +dv++l+k++++  g+  l+D+V nHt+++  w +e 
    KHJ32912.1  42 SKLDYIKSLGIDVVWICPIFASPQVDYGYDISNYKDIYPPY-------GTLADVDELIKQCHS-RGIKILMDLVVNHTSDQHIWFKES 121
                   67889999999999999999999999999999999999987.......4789********986.59******************9885 PP

>> Alpha-amylase_C  Alpha amylase, C-terminal all-beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   8.7e-05      0.39       7      61 ..     509     563 ..     505     569 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 8.7e-05
                      TTSSEEEEEECTTT.EEEEEEE-SSSSEEECEEESSSSSEEEEETTCTTSGCCTTT CS
  Alpha-amylase_C   7 eenkviaFeRgdge.kllvvfNfhpsnsrqdyrvgvpaagkyrdvlntdaeeyggs 61 
                      e+++v+aF+R+ ++ ++lv  Nf + + r +++  ++     + +++  +++++g+
       KHJ32912.1 509 ENQDVFAFLRRFEDqSVLVLSNFRSREIRWKIPNEFN-LQSDKILISNYDTKFNGD 563
                      6799******997779********9888666666555.455777778888888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (580 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 4247.95
//
Query:       KHJ32913.1  [L=197]
Description: hypothetical protein EV44_g5174 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-13   50.5   2.7    3.3e-13   49.9   2.7    1.3  1  YqeY             Yqey-like protein
  ------ inclusion threshold ------
      0.087   13.5   0.4       0.16   12.7   0.4    1.4  1  DXP_reductoisom  1-deoxy-D-xylulose 5-phosphate reductoisomer


Domain annotation for each model (and alignments):
>> YqeY  Yqey-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   2.7   3.7e-17   3.3e-13       3     122 ..      53     170 ..      52     190 .. 0.90

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 3.7e-17
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHTTSS--HHHHHHHHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHGGG..S-----HHHHHHH CS
        YqeY   3 klkedlkeamkakdkerlstlrllkaaikqeevderkelsdeevlkvlakevkqRresieefekagRedlaekekaEievleeY..lPeqlseeeieal 99 
                 k+++dlk+a+++kd+ r +++r l  a + + v+++++     +l+++++++k    + e+++ a+Redl++k++   ++l+eY  + e l+ee i+++
  KHJ32913.1  53 KIRDDLKTALQNKDTPRSTVIRSLIDASNARPVKTNIQ-----LLAIINRALKDSTVATEHYKIAEREDLVNKQELQTQILQEYsaMVETLDEETIKKV 146
                 799************************99999998875.....69***************************************77789********** PP

                 HHHHHHHTT--.BGGGHHHHHHHH CS
        YqeY 100 vkeaiaevgae.smkdmGkvmkal 122
                 ++ ++++++++ +  ++G v++++
  KHJ32913.1 147 LEGIVNDLKEKkEAIKFGYVLHKA 170
                 ********8762566899998765 PP

>> DXP_reductoisom  1-deoxy-D-xylulose 5-phosphate reductoisomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.4   1.7e-05      0.16      33     100 ..      86     152 ..      71     169 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.7e-05
                      SSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHHHHHHHHCHTT-SEEEE--SS CS
  DXP_reductoisom  33 gsnvellaeqakefkpklvavadeeaaeelkealkekelktevlvGeealkelaeeeeadvvvaaivG 100
                      ++n++lla + +++k ++va ++  + +e ++ ++++el+t++l   +a++e + ee+++ v+ +iv 
       KHJ32913.1  86 KTNIQLLAIINRALKDSTVATEH-YKIAEREDLVNKQELQTQILQEYSAMVETLDEETIKKVLEGIVN 152
                      67888888888888888888755.5566678888899*****************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1408  (0.078532); expected 358.6 (0.02)
Passed bias filter:                      645  (0.0359752); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.21s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 1587.09
//
Query:       KHJ32914.1  [L=844]
Description: putative elongation factor 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.3e-66  223.0   0.1    3.5e-66  222.5   0.1    1.3  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    1.7e-33  115.0   0.0    6.9e-33  113.0   0.0    2.0  2  EFG_IV       Elongation factor G, domain IV
      4e-20   71.6   0.0      9e-20   70.5   0.0    1.6  1  EFG_C        Elongation factor G C-terminus
    4.8e-13   49.3   0.0    2.9e-12   46.8   0.0    2.4  2  GTP_EFTU_D2  Elongation factor Tu domain 2
    1.7e-12   47.2   0.0    4.3e-12   45.9   0.0    1.7  1  EFG_II       Elongation Factor G, domain II
    0.00065   19.8   0.2     0.0014   18.7   0.2    1.6  1  MMR_HSR1     50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.5   0.1   1.2e-69   3.5e-66       2     194 .]      18     345 ..      17     345 .. 0.93

  Alignments for each domain:
  == domain 1  score: 222.5 bits;  conditional E-value: 1.2e-69
                 CEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEE................TTCSSEEEEEEEESSSGGGH CS
    GTP_EFTU   2 rirnigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisle................ketkkylinliDtPGHvdFs 84 
                 ++rn+++i+hvDhGK+TLtd+Ll k+g+is   +ka+++r++Dt+++E+ergiTiks+aisl+                ++++++linliD+PGHvdFs
  KHJ32914.1  18 NVRNMSVIAHVDHGKSTLTDSLLSKAGIISA--AKAGDARATDTRADEQERGITIKSTAISLYgnlpddqdladivgqkTDGRDFLINLIDSPGHVDFS 114
                 79*****************************..778889**************************************855******************* PP

                 HHHHHHHHT-SEEEEEEETTTBSTHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHHHH...............HHHHHHHHHTTTTTE CS
    GTP_EFTU  85 kevirglrvlDgavlvvdaveGvepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqklsrk...............eeklekygekgekev 168
                 +ev+++lrv+Dga++vvd  eGv++qte+vlr+al e+++++v+iNK+Dr+  el+ ++e+++q++sr+                +++++y++kg    
  KHJ32914.1 115 SEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVIINKVDRALLELQVTKEDLYQSFSRTiesvnvvistyldqsIGDVQVYPQKG---- 209
                 ******************************************************************99999999999999977777777777776.... PP

                 EEEEEBTTTTBTHH..................................................................................... CS
    GTP_EFTU 169 pvvfgSalkgegvk..................................................................................... 182
                 +v+fgS+l+g++++                                                                                     
  KHJ32914.1 210 TVAFGSGLHGWAFTlrqfsiryakkfgvdknkmmerlwgdnffnphtkkwtksdtyegkplerafnqfildpifkifaavmnfkkeeistllgklqikl 308
                 5**********9998899999999999999999999999999999999999999999999999999999999999999999999999999999999999 PP

                 .........................HHHHHHHHHSHH CS
    GTP_EFTU 183 .........................tllealvellps 194
                                          +l+e+++ +lps
  KHJ32914.1 309 paddrskegkallkvimrtflpaadALMEMMILHLPS 345
                 9999999999999999999999998899999999885 PP

>> EFG_IV  Elongation factor G, domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.73   2.2e+03       1      14 [.     560     573 ..     560     582 .. 0.81
   2 !  113.0   0.0   2.3e-36   6.9e-33       2     120 ..     606     721 ..     605     722 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.73
                 TCCESCEE.SS-CC CS
      EFG_IV   1 pqVayrEtirkpvk 14 
                 p V+yrEt+  ++ 
  KHJ32914.1 560 PVVSYRETVSSKSS 573
                 679*****988765 PP

  == domain 2  score: 113.0 bits;  conditional E-value: 2.3e-36
                 CCESCEE.SS-CCHCCCCCCCHTSSSHCCCCCEEEECCTTTTSSEEEEE--STCCCHCCCCHHHHCCCCCCTTS-TTTS--EESEEEEEEEEE--T..T CS
      EFG_IV   2 qVayrEtirkpvkereeklkkqsggdgqyakvileiePleegsgnefvdetkggqvpkeyieavekGfqealkeGplagepvtdvkvtLldgslhe..v 98 
                 +++ r    ++ k+r+++l++ +g+d ++a++i++++P++ ++ n +vd+tk +q+++e++++v+ Gfq+a +eGp+a+ep++ ++++++d++lh+  +
  KHJ32914.1 606 RINPR----DDFKARARILADDHGWDVTDARKIWCFGPDT-NGANLLVDQTKAVQYLNEIKDSVVSGFQWASREGPIAEEPMRSCRFNIMDVTLHAdaI 699
                 56677....899**************************87.********************************************************** PP

                 TC-HHHHHHHHCHHHHHHHHCC CS
      EFG_IV  99 dsseaafkpaarralkeallkA 120
                 ++++++++p+arr+l++++l A
  KHJ32914.1 700 HRGGGQIIPTARRVLYASALLA 721
                 *****************99877 PP

>> EFG_C  Elongation factor G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.5   0.0     3e-23     9e-20       2      83 ..     725     807 ..     724     811 .. 0.97

  Alignments for each domain:
  == domain 1  score: 70.5 bits;  conditional E-value: 3e-23
                 EEEEEEEEEEEEECCCCCCHHHHHHHCT-EEEEEEEE..TTEEEEEEEEEGGG-TTHHHCHHHCTTTS-EEEEEEEEEEE--H CS
       EFG_C   2 llEPivkveievpeeyvgkvisdlssrrGeiedmeqd.asgrviieaeiPlaeligfateLrslTkGegsfsmefsgYeevpg 83 
                 +lEPi+ vei+vpe  +g v++ +++rrG+i   eq+ ++  ++i+a +P+ e++gf+ +Lr +T+G++  ++ f++++ +pg
  KHJ32914.1 725 FLEPIFLVEIQVPEHAMGGVYGVITRRRGNIFAEEQRpGTPLFTIKAYLPVMESFGFNGDLRGATAGQAFPQSVFDHWDILPG 807
                 79***********************************99****************************************9987 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.0   9.8e-16   2.9e-12       2      74 .]     395     471 ..     394     471 .. 0.93
   2 ?   -2.4   0.0       2.3   6.7e+03       4      17 ..     598     611 ..     595     638 .. 0.85

  Alignments for each domain:
  == domain 1  score: 46.8 bits;  conditional E-value: 9.8e-16
                  EEEEEEEEESEEETTEEEEEEC.TCTTSEE...EEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCEEE CS
  GTP_EFTU_D2   2 tvalgrvysGtlkkGdevrilg.ndtskke...ivtrissletfhededeavaganaGvivaikgledaiivGdtlt 74 
                  ++a+grv+sGt++ G +vri g n+t++k+    +  ++++  +++ +  +++ ++aG+i++++g+++ ++++ tlt
   KHJ32914.1 395 FYAFGRVFSGTVRSGLKVRIQGpNYTPGKKddlFIKAVQRTVLMMGGKVDPIDDVPAGNILGLVGIDQFLLKSGTLT 471
                  579******************************88888888888899*********************999999886 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.3
                  EEEEEEESEEETTE CS
  GTP_EFTU_D2   4 algrvysGtlkkGd 17 
                  + g ++sG +++ d
   KHJ32914.1 598 VSGAIESGRINPRD 611
                  77899999998866 PP

>> EFG_II  Elongation Factor G, domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.0   1.5e-15   4.3e-12       4      66 ..     488     549 ..     486     558 .. 0.93

  Alignments for each domain:
  == domain 1  score: 45.9 bits;  conditional E-value: 1.5e-15
      EFG_II   4 PvislaiepkskadedklskaLarlleEDptlrverdeeTketilsGmGelHleivverlkre 66 
                 Pv++ ++e k+ +d  kl + L+rl++ Dp + ++ + e++e i++G GelHlei ++ l+++
  KHJ32914.1 488 PVVQRSVEVKNAQDLPKLVEGLKRLSKSDPCVLTSIN-ESGEHIVAGAGELHLEICLKDLEED 549
                 9*******************************99997.8*******************99987 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.2   4.7e-07    0.0014       7     113 ..      27     160 ..      21     161 .. 0.65

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 4.7e-07
                 STTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEE....................................EEEEECGGCSSHHHHHHHHHH CS
    MMR_HSR1   7 rpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgke....................................ielvDtpGliegaseekglgk 68 
                 +   GKStL  +l+ +   i ++k+g  r + ++  + +  e                                    i+l+D pG ++       ++ 
  KHJ32914.1  27 HVDHGKSTLTDSLLSKaGIISAAKAGDARATDTRADE-Q--ErgitikstaislygnlpddqdladivgqktdgrdflINLIDSPGHVD-------FSS 115
                 5678**********98334556677777777666333.1..1234455566777777778888999999999999999********665.......666 PP

                 HHHHHHC.TSEEEEEEETTTTCSHHHH.HHHHHHHHHTTSEEEEEEE CS
    MMR_HSR1  69 aflalee.adlillvvdaseeklkpld.eeleelleeakkplilvln 113
                 ++ a  + +d +l+vvd   e++  +    l + l e+ kp ++++n
  KHJ32914.1 116 EVTAALRvTDGALVVVDTI-EGVCVQTeTVLRQALGERIKP-VVIIN 160
                 666666647********44.333333303334444434444.55555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (844 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 5672.55
//
Query:       KHJ32915.1  [L=2972]
Description: putative fermentation associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2972 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.20u 0.28s 00:00:01.48 Elapsed: 00:00:00.47
# Mc/sec: 18851.35
//
Query:       KHJ32916.1  [L=646]
Description: putative duf300 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.3e-83  278.9   6.5    6.1e-83  278.4   6.5    1.2  1  Solute_trans_a  Organic solute transporter Ostalpha


Domain annotation for each model (and alignments):
>> Solute_trans_a  Organic solute transporter Ostalpha
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  278.4   6.5   3.4e-87   6.1e-83      41     265 .]      34     262 ..      19     262 .. 0.97

  Alignments for each domain:
  == domain 1  score: 278.4 bits;  conditional E-value: 3.4e-87
  Solute_trans_a  41 lmvpiyavsSllsllfpsaavylelvrdcYeafviysFfsllleylggeealikalerdek.kkllplnlclekvklt.lkflkrcklgvlQyvv 133
                     ++vpiy++sS+ s+++ +aa+ l+++rd+Yeaf+iy+Ff+ll++++gge+ali ++ ++e+ ++l+pl +cl+kv+++ +++++ +k+g+lQy++
      KHJ32916.1  34 ILVPIYSLSSWSSIVSLRAAMLLDPIRDIYEAFTIYTFFQLLINFIGGERALIIMMYGREPvEHLFPLKYCLPKVDISdPHTFLAIKRGILQYTW 128
                     68*********************************************************77366**************9**************** PP

  Solute_trans_a 134 vkpllaivslileslgvyce.sfspkfaylyltiiynvsvtlAlyalllfykalkkeLkpfkpvlKflciklvvfltfwQglvlsilvkvgvike 227
                     +kp++ ++sli++++g y+e  + ++++yl+  i yn+svt++ly+l+lf+++++k+L+pf+p++Kflcikl++f+++wQg++lsilv++g+i++
      KHJ32916.1 129 LKPVFGFISLIMKATGIYKEgYLGLDSGYLWSGIAYNLSVTISLYSLGLFWVCMSKDLQPFRPLPKFLCIKLIIFASYWQGFFLSILVWSGAIPD 223
                     *******************768************************************************************************9 PP

  Solute_trans_a 228 tkk.lsaediaagiqnllicvEMvlfailhlyaFpykeY 265
                     + + +++++ia +iq+ lic+EM++fai h+yaF++++Y
      KHJ32916.1 224 NVEgYTSDNIAMAIQDSLICIEMPIFAIGHWYAFSWHDY 262
                     8779*********************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (646 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       873  (0.0486921); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4479.40
//
Query:       KHJ32917.1  [L=145]
Description: hypothetical protein EV44_g3774 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-11   44.5   0.0    2.4e-11   43.6   0.0    1.5  2  RT_RNaseH_2  RNase H-like domain found in reverse transcripta
    1.4e-11   44.5   0.0    3.9e-11   43.2   0.0    1.7  2  RT_RNaseH    RNase H-like domain found in reverse transcripta
    0.00031   20.3   0.1    0.00044   19.8   0.1    1.2  1  RVT_1        Reverse transcriptase (RNA-dependent DNA polymer


Domain annotation for each model (and alignments):
>> RT_RNaseH_2  RNase H-like domain found in reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       2.2   1.3e+04      51      67 ..      12      28 ..      10      30 .. 0.65
   2 !   43.6   0.0     4e-15   2.4e-11      38      86 ..      95     143 ..      91     145 .] 0.92

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 2.2
  RT_RNaseH_2 51 ddgkerpiafaSrklsk 67
                 +d+++++++ + +kl k
   KHJ32917.1 12 EDEHWEIVGSILKKLDK 28
                 44557777777777765 PP

  == domain 2  score: 43.6 bits;  conditional E-value: 4e-15
  RT_RNaseH_2  38 SdtgigavLsqedddgkerpiafaSrklskaernysttekellAivwal 86 
                   d  +g++Lsq+dd+g+++p+a +S++l++ae ny++ +ke+ Aiv  l
   KHJ32917.1  95 QDMLWGGCLSQRDDQGTLKPVANFSKRLNSAEFNYPIQDKEMHAIVAYL 143
                  56778**********99*****************************877 PP

>> RT_RNaseH  RNase H-like domain found in reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.81   4.9e+03      25      43 ..      11      29 ..       8      41 .. 0.77
   2 !   43.2   0.0   6.4e-15   3.9e-11      12      61 ..      94     143 ..      89     145 .] 0.94

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.81
                TTE..EEEEEEEEEE--HH CS
   RT_RNaseH 25 eedgeerpiafaSrklsga 43
                +ed++++++  + +kl+++
  KHJ32917.1 11 DEDEHWEIVGSILKKLDKT 29
                5677788888888888775 PP

  == domain 2  score: 43.2 bits;  conditional E-value: 6.4e-15
                 ECTEEEEEEEEEETTE..EEEEEEEEEE--HHHHTS-HHHHHHHHHHHHH CS
   RT_RNaseH  12 AsddgigavLsqreedgeerpiafaSrklsgaernystiekellAivaal 61 
                 A d  +g++Lsqr+++g+ +p+a +S++l++ae ny++ +ke+ Aiva l
  KHJ32917.1  94 AQDMLWGGCLSQRDDQGTLKPVANFSKRLNSAEFNYPIQDKEMHAIVAYL 143
                 78999******************************************977 PP

>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.1   7.3e-08   0.00044     167     221 ..       1      51 [.       1      52 [. 0.93

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 7.3e-08
                 TTEEEEEESS.HHHHHHHHHHHHHHHHHTT--BEGGG-EEE.....ESSEEETTEE CS
       RVT_1 167 aDDililsks.keelqelleaveewlkesglkinpeKtklvlftvkseevkyLGvt 221
                 +DD+  ++ + ++e+ e++ ++ ++l + gl +  eK+ ++      ++vk+LG +
  KHJ32917.1   1 MDDVPMHTAGdEDEHWEIVGSILKKLDKTGLCLDIEKCDFL-----CKQVKFLGSI 51 
                 8*********6666***************************.....7*******65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1137.98
//
Query:       KHJ32918.1  [L=332]
Description: putative atp-dependent dna helicase pif1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-49  168.2   0.0    6.8e-26   91.3   0.0    2.1  2  PIF1             PIF1-like helicase
      2e-05   22.8   0.0    3.1e-05   22.1   0.0    1.2  1  Herpes_Helicase  Helicase
    4.5e-05   23.3   0.0    6.9e-05   22.6   0.0    1.2  1  AAA_30           AAA domain
  ------ inclusion threshold ------
       0.14   11.9   0.0       0.26   11.1   0.0    1.4  1  CLP1_P           mRNA cleavage and polyadenylation factor CLP


Domain annotation for each model (and alignments):
>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.3   0.0   1.5e-29   6.8e-26      29     121 ..       3      94 ..       1     102 [. 0.96
   2 !   75.3   0.0   1.1e-24     5e-21     248     364 .]     104     216 ..      93     216 .. 0.89

  Alignments for each domain:
  == domain 1  score: 91.3 bits;  conditional E-value: 1.5e-29
                 ESTTSSCHHHHHHHHHHCHCTCCCEEEEESSHHHHHCC.TSEECHHHHT-TTSSS-HHHHHHHTSCCCHHHHHC-SEEEEECGGGSBHHHHHH CS
        PIF1  29 GsgGtgKtflwkallkklrsegkivlavAssGvAalllegGrtahsrfkiplekdeestckikrgsklaellkktsliiwDEapmverecfea 121
                 G +GtgK fl+k+l++k rsegk+vl+ AssG+Aalll++G  +hs+f+ p++ +ee +c+i  +s+la ll +++liiwDE+ + +r+ f a
  KHJ32918.1   3 GPAGTGKKFLYKTLCNKYRSEGKVVLCAASSGIAALLLPKGL-SHSLFNTPINSNEETQCRITGNSDLAGLLRRAHLIIWDEVTLQSRHDFAA 94 
                 99***************************************5.8********************************************98865 PP

  == domain 2  score: 75.3 bits;  conditional E-value: 1.1e-24
                 CS---SS--...........EEEESSCCHHHHHHHHHHCCSSS--EEEE-EEE...........ESBSSCHHCHHHCCTTSS-SCEEE-TT-EEEE-S- CS
        PIF1 248 sevygdllqeltdkeyleerailcptnedvdeiNnyvlsklpgeekeylssDsisksseeieeldalypteflnslkanglpnhvLkLkvGvpvmllrN 346
                 +++y++   +  d + +++rail+++n++v + Nn++      e +ey++ D++++++ +       yp+efl +l   g p  +L L+vG+ vm lrN
  KHJ32918.1 104 EFIYPQDQLSAGDVSIFHDRAILTSRNDEVTSFNNTIAGLRATESHEYYAQDKVQNEEARHI---SDYPAEFLHTLGGFGQPLGRLTLQVGMSVM-LRN 198
                 5678886666889999*************************************988776643...36***************************8.6** PP

                 -CTT-SC-TCEEEEEEEE CS
        PIF1 347 ldqsaGLcNGtrlivtql 364
                 l +++GLcNGtrli+t+l
  KHJ32918.1 199 LYPKMGLCNGTRLIITRL 216
                 ***************987 PP

>> Herpes_Helicase  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   6.9e-09   3.1e-05     732     777 ..     265     309 ..     253     319 .. 0.93

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 6.9e-09
  Herpes_Helicase 732 lamtiaksqGlslekvAicFgnhknlklssvYvalsRatdseflvm 777
                       +mti ksqG  l++v ++          ++Yv+lsR+td + l++
       KHJ32918.1 265 FSMTINKSQGQTLQQVGVDLPTP-VFSHGQLYVTLSRVTDVNKLIL 309
                      58******************998.999***************9986 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   1.5e-08   6.9e-05      25     107 ..       3      94 ..       1      98 [. 0.74

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 1.5e-08
      AAA_30  25 GpAGtGKttalkalreaweaaggrviglAptgkaAkvLaeelgi.........eastiakllkrlk........grarlepgtllivDEagmvdtkqla 106
                 GpAGtGK ++ k+l + ++++g+ v+ +A++g aA  L ++l           + +t        +        g   l++++l+i DE+ + + +++a
  KHJ32918.1   3 GPAGTGKKFLYKTLCNKYRSEGKVVLCAASSGIAALLLPKGLSHslfntpinsNEETQC------RitgnsdlaG--LLRRAHLIIWDEVTLQSRHDFA 93 
                 9*********************9999999******999987774333333332333444......1444553432..5666699999**9999988877 PP

      AAA_30 107 a 107
                 a
  KHJ32918.1  94 A 94 
                 6 PP

>> CLP1_P  mRNA cleavage and polyadenylation factor CLP1 P-loop
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   5.7e-05      0.26       1      61 [.       3      62 ..       3      66 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 5.7e-05
      CLP1_P  1 GpkdsGKSTlarlLlNyalrkgrkpvyvDlDvGqseispPgtislalverpidveegfsld 61
                Gp  +GK  l ++L+N+  r++ k+v+  +  G   + +P  +s +l ++pi+++e+++++
  KHJ32918.1  3 GPAGTGKKFLYKTLCNKY-RSEGKVVLCAASSGIAALLLPKGLSHSLFNTPINSNEETQCR 62
                899**************6.67779*****************************99998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       452  (0.0252106); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2354.92
//
Query:       KHJ32919.1  [L=181]
Description: hypothetical protein EV44_g2207 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       343  (0.019131); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1447.38
//
Query:       KHJ32920.1  [L=111]
Description: hypothetical protein EV44_g5314 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 831.37
//
Query:       KHJ32921.1  [L=812]
Description: putative glutaminase a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-66  222.1   0.1    1.1e-65  221.2   0.1    1.5  1  DUF1793   Domain of unknown function (DUF1793)
    9.9e-65  217.4   0.3      5e-49  166.3   0.0    2.4  2  DUF4965   Domain of unknown function (DUF4965)
    2.6e-40  138.6   0.0      5e-40  137.7   0.0    1.5  1  DUF5127   Domain of unknown function (DUF5127)
    0.00028   20.4   0.0    0.00066   19.2   0.0    1.6  1  DUF4964   Domain of unknown function (DUF4964)


Domain annotation for each model (and alignments):
>> DUF1793  Domain of unknown function (DUF1793)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  221.2   0.1   2.4e-69   1.1e-65       1     166 []     581     780 ..     581     780 .. 0.98

  Alignments for each domain:
  == domain 1  score: 221.2 bits;  conditional E-value: 2.4e-69
     DUF1793   1 iGikAmseiaellgeeedakkysaiaeeyikkwe.elai..dgthlklaYdkedswsllYnlyaDkll.............................gl 67 
                 iGi+Am++i+++++++eda+++ +i++++i+ w+ ++ai  d +h+klaY++ +sw++lYnlyaD+ll                              +
  KHJ32921.1 581 IGIRAMADISKIVSKHEDANNFLQISQSFIHLWHkDFAIsrDRSHAKLAYTWFGSWTTLYNLYADSLLcfhlprhlrkktssrefqaileagemkmsRT 679
                 8********************************87899976669*****************************************************99 PP

     DUF1793  68 nlvpqsvyemqsafYktvaqkyGlplDsrhtytksdWelfaaavaskktreelissvakwvnetktdrpftdlYdtegtgglpg..frarpvvGGhFal 164
                  ++ +++y++qs++Y++v+q+yGlplDsrh+y+ksdWe+fa+av+s+++ree+++sva wvnet+td p+tdlYdteg+gg+pg  f+arpvvGGhFa+
  KHJ32921.1 680 AFIHERIYKRQSDWYHSVRQRYGLPLDSRHLYAKSDWEFFAVAVSSRHVREEIVQSVALWVNETSTDLPLTDLYDTEGSGGYPGflFKARPVVGGHFAF 778
                 *************************************************************************************************** PP

     DUF1793 165 La 166
                 La
  KHJ32921.1 779 LA 780
                 97 PP

>> DUF4965  Domain of unknown function (DUF4965)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.3   0.0   1.1e-52     5e-49       2     126 ..     356     478 ..     355     493 .. 0.95
   2 !   48.9   0.1   1.2e-16   5.6e-13     128     174 .]     529     575 ..     523     575 .. 0.92

  Alignments for each domain:
  == domain 1  score: 166.3 bits;  conditional E-value: 1.1e-52
     DUF4965   2 ggekYadllalsvRqafaalelvskdetsevllflKeissngnvntvDviypalPlflylnpellkllLeplleyqesgkypkkfaahDlGtsYPnatg 100
                 g+++Y d+lals+Rq+++a  +++  + +++++f Keiss+gn+ntvDviypa+P+fly+np++l +l+epl+e++ sg+yp+++++hDlG+s+Pnatg
  KHJ32921.1 356 GSTDYKDILALSARQVMGACSFAG--TPNDPMIFFKEISSDGNMNTVDVIYPASPFFLYTNPRWLAWLMEPLIEHMLSGQYPNDYSMHDLGSSFPNATG 452
                 789********************5..459********************************************************************** PP

     DUF4965 101 qndgedeqmpveesGnmlimalayaq 126
                 + dg+de mpvee+Gnmli+ la+++
  KHJ32921.1 453 HPDGRDEFMPVEECGNMLILGLALIN 478
                 ********************999875 PP

  == domain 2  score: 48.9 bits;  conditional E-value: 1.2e-16
     DUF4965 128 sgdasllekyydllkqWadYLvengldpanqlstddfagalanqtnL 174
                 ++ ++++ + y+l kqWa+YLv+++l+panqlstddfag lanqtnL
  KHJ32921.1 529 KQAREWIGRSYPLWKQWAEYLVREALIPANQLSTDDFAGWLANQTNL 575
                 56779*****************************************8 PP

>> DUF5127  Domain of unknown function (DUF5127)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.7   0.0   1.1e-43     5e-40      13     227 .]     124     351 ..     116     351 .. 0.88

  Alignments for each domain:
  == domain 1  score: 137.7 bits;  conditional E-value: 1.1e-43
     DUF5127  13 veltvtFlSPvlpddldrqSlpfsYltvevkstdgkshsVqvYsdisaewasgdesqevewst...t...t...gglayhkvgrqnqevlsekndradw 102
                  ++t++FlSP++p+   rqS+p sYl+v v+ +     ++ +Y+di++ w+sg++++e+ w+    +   +   + +++++v+r+ q+ l+e+ dr +w
  KHJ32921.1 124 TKVTLSFLSPITPTSTLRQSIPASYLSVYVTGSL----NIDLYIDINGLWVSGSRDSEIVWDIvhqNhreSaspSLIRSWRVKRKVQQLLTEELDRSEW 218
                 689***************************9544....7**********************9855414442345578999******************* PP

     DUF5127 103 GyaylatkakssltyqsgedtevrkqFvkngklantkdtnfraisddwpvfalahdlgsv.....ss.esksvvfaiGyvrdpaiqylg....qnlrpy 191
                 G++y++ +  ++++y+ g++  +r++F+++g+l+n  d+ fr+i +d+pvfa+a ++         +  +++ +f++++ +dp i++++    + +rp+
  KHJ32921.1 219 GTLYFSGP--DEVKYEAGTSALLRQKFARTGTLDNLIDNRFRPIMNDEPVFAFAKSFKLNatencPGfIDETITFSVAHIQDPIIKFASarglTLMRPL 315
                 ********..36*****************************************98766552233322235889***************9999999**** PP

     DUF5127 192 WrskyssiedalsaflkdyaaalkrsealDkkirad 227
                 W+++ys+ ed++s+++ d+++a++ + +  +++++d
  KHJ32921.1 316 WTNYYSTPEDLISFHYYDFKKASNLAGNYTRQLEKD 351
                 ***********************9998888888765 PP

>> DUF4964  Domain of unknown function (DUF4964)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   1.5e-07   0.00066      18      79 ..      15      80 ..       2      86 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 1.5e-07
     DUF4964 18 eekkseLRaPayPLvtidpylsiWsftd..eLndesvkhwtgkdlpllgvlrVDG..kvYrfmGke 79
                + + s+L+ P  PL++ +pyls+W      +  ++   +wtg++  l  ++ V    +vY ++G+ 
  KHJ32921.1 15 TIEASTLKPPVLPLIVRNPYLSAWLKNArgNPWENWPIFWTGQEIGLGILISVPNtkTVYPLLGRP 80
                567899******************77651155577789******9998888885422567777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (812 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 5855.23
//
Query:       KHJ32922.1  [L=750]
Description: putative glucose-responsive transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-09   37.3  10.7    3.3e-09   36.7  10.7    1.3  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
    2.5e-09   36.6   1.9    4.5e-09   35.7   0.5    2.1  2  Fungal_trans  Fungal specific transcription factor domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.7  10.7   3.7e-13   3.3e-09       1      38 [.     114     155 ..     114     157 .. 0.89

  Alignments for each domain:
  == domain 1  score: 36.7 bits;  conditional E-value: 3.7e-13
                 SS-HHHHHCT---ST....SSSS-HHHHHCTHHHCCCCTCCC CS
     Zn_clus   1 haCdnCrkkKvKCda....kkPaCsnCkklnleCtfysessk 38 
                 +aCd+Cr+kK++Cda    ++++C nCk++++ C f + + k
  KHJ32922.1 114 RACDECRRKKIRCDAttdqNNENCLNCKRVGARCLFSRVPMK 155
                 69*************99999999***********98777665 PP

>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.13   1.2e+03     175     191 ..      21      37 ..      12      70 .. 0.78
   2 !   35.7   0.5     5e-13   4.5e-09      60     195 ..     362     508 ..     339     530 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.13
  Fungal_trans 175 llddsqinlpLPcdddd 191
                   +++ +q+++ LP+ d+ 
    KHJ32922.1  21 NISQNQQQTDLPNPDEL 37 
                   68999999999999983 PP

  == domain 2  score: 35.7 bits;  conditional E-value: 5e-13
  Fungal_trans  60 ssltsesqefiafplraeili......hedfsspssslwil..qsLlllelyektssdralher.........hhgvavrlarslgLhrnpsyvgkk 139
                   s l  +s+++i ++ ++++++      +ed++s + +++il  qs lll++   +  ++ +h r         +++ a++la+s++L  + +++ ++
    KHJ32922.1 362 SFLLGDSSHQIDSFTSHRSTQyilvssLEDATSRPLKINILylQSMLLLAIAAEN--NTFGHPRvlggysrsiWINNAISLAYSIKLFLHRPRKVND 456
                   4444455677888888888888888887777777777776511566666666655..6678888888888*****************9999999964 PP

  Fungal_trans 140 slwklweeeaes.rrRlwwaaFylDktialklGrppllddsqinlpLPcddddlwes 195
                       ++ e+ e   rRlww++++++++ +  +  p+l++ds  ++++P+d   l+e+
    KHJ32922.1 457 ----VSTETDEHfARRLWWSIYVMERWNSASTSSPFLIPDS-ASVLYPDDLPLLGET 508
                   ....55554554499*********************76665.567777766666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (750 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.24s 00:00:00.86 Elapsed: 00:00:00.41
# Mc/sec: 5490.62
//
Query:       KHJ32923.1  [L=458]
Description: putative copper fist dna binding domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-21   75.6   2.3    1.4e-21   75.6   2.3    2.5  3  Copper-fist  Copper fist DNA binding domain
  ------ inclusion threshold ------
       0.24   11.0   0.2        7.7    6.2   0.1    2.3  2  Leu_leader   Leucine operon leader peptide


Domain annotation for each model (and alignments):
>> Copper-fist  Copper fist DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.6   2.3   1.6e-25   1.4e-21       1      39 []       1      39 [.       1      39 [. 0.98
   2 ?   -0.7   0.5      0.11     1e+03      19      25 ..      39      47 ..      39      56 .. 0.72
   3 ?   -6.0   3.4         2   1.8e+04      11      18 ..      82      88 ..      80     101 .. 0.53

  Alignments for each domain:
  == domain 1  score: 75.6 bits;  conditional E-value: 1.6e-25
                 EEETTEEEEETTTTTTSGGGG----SS-EEEE-S----. CS
  Copper-fist  1 ilidgeKyACesCirGHRsstCkHsdrplveirkkGRPv 39
                 +li geK+ACe+C+rGHR+s+C+Hsdrpl++i+kkGRPv
   KHJ32923.1  1 MLIAGEKWACEACVRGHRVSNCQHSDRPLQHINKKGRPV 39
                 89************************************6 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.11
                 GGG---..- CS
  Copper-fist 19 sstCkH..s 25
                 +s+C+H  +
   KHJ32923.1 39 VSQCQHcrT 47
                 699**9442 PP

  == domain 3  score: -6.0 bits;  conditional E-value: 2
                 TTTTTTSG CS
  Copper-fist 11 esCirGHR 18
                 + C  G R
   KHJ32923.1 82 S-CCHGRR 88
                 4.555533 PP

>> Leu_leader  Leucine operon leader peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.1   0.00085       7.7      18      28 .]      14      24 ..      12      24 .. 0.94
   2 ?    2.6   0.0     0.011     1e+02      20      28 .]      36      44 ..      33      44 .. 0.92

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.00085
  Leu_leader 18 vRGrlVggiQh 28
                vRG +V+  Qh
  KHJ32923.1 14 VRGHRVSNCQH 24
                9*********9 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.011
  Leu_leader 20 GrlVggiQh 28
                Gr+V+  Qh
  KHJ32923.1 36 GRPVSQCQH 44
                ********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      268  (0.0149478); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 3562.37
//
Query:       KHJ32924.1  [L=533]
Description: putative mfs drug efflux [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-36  126.1  54.6    4.3e-36  124.6  54.6    1.8  1  MFS_1     Major Facilitator Superfamily
      2e-08   33.6  15.1      2e-08   33.6  15.1    2.8  3  Sugar_tr  Sugar (and other) transporter
  ------ inclusion threshold ------
       0.26   11.2   1.6        2.3    8.2   0.1    2.5  2  DEFB136   Beta defensin 136


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.6  54.6   7.3e-40   4.3e-36       2     351 ..      39     442 ..      38     444 .. 0.90

  Alignments for each domain:
  == domain 1  score: 124.6 bits;  conditional E-value: 7.3e-40
       MFS_1   2 llaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllfasslwlllvlrvlqGlga 99 
                 l +afl al+ +i++ + p  +  +++ s s ++++ t+   +aa ++l++G +   f +++++++++++f lg ++++l a+++ +++++r+++Glg+
  KHJ32924.1  39 LSSAFLFALDNTIVANVQP-VIVLEFN-SISKLSWMSTALLMTAASTNLIWGKVFAQFEAKWTYIICVAMFELGsGICGL-AQNMDTMIIARAICGLGG 134
                 6688999999999999999.9******.**********************************************555555.566559************ PP

       MFS_1 100 galfpagaaliadwfpkeergraigllsagfslGailgpllgglla.sslgWravfyilaivsllafvlfllll..peepperkrkspkeee....... 188
                 ++++ ++++lia+ ++ +er+++i++ ++ ++lG++lgp++gg+++ s++gWr++fyi+ i++l++  + ++ll  ++++p  +  + ++e        
  KHJ32924.1 135 SGMYVGVLTLIAANTTIRERPLYISFTGLVWGLGTVLGPIIGGAFSvSAGGWRWSFYINLIIGLVCTPVYIFLLpkWDPRPGVGFLERAREMdylgsvl 233
                 **********************************************9*******************99555555667777777777666666******* PP

       MFS_1 189 ................................................kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlg 239
                                                                   t++  ++p  + ++++  l +l+ ++++++ + +++ +++p+++q++++
  KHJ32924.1 234 tvgaflsgvmpisfggvqyawsspeiismfvcsgvlfiilgiqqtyciLTTKENRVFP-VEFVKSRTML-VLFGCSAIGGGIAFLTIYMIPIFFQFTRN 330
                 **********************************999999999999997777777777.6666666644.477777777777777************** PP

       MFS_1 240 lsglllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllll.vlvliGfglgfvfpsllalasdlappeeagta 337
                  s +l++g+ l  + ++ +++ +l g+++  +g   ++++++++++++  +l+++ ++++++++++  +v++G glg++  s +++a+ l+ p+    a
  KHJ32924.1 331 DS-ALESGIRLLPYIFLLIFGIFLNGFVLSLYGLYMPWFVIGSVFSIVGGALMYTVTSTTSIATVYgYSVILGWGLGLYIQSGFSIAQALVEPNIVSLA 428
                 **.8******************************************************8888888878899999************************* PP

       MFS_1 338 sglfntagslggal 351
                 +g+++ a+  g+ +
  KHJ32924.1 429 IGFISCAQLSGITI 442
                 ****9888777665 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6  15.1   3.3e-12     2e-08      31     190 ..      44     206 ..      26     226 .. 0.85
   2 !    4.9   9.2    0.0016       9.7      23     118 ..     316     407 ..     299     414 .. 0.86
   3 ?   -3.6   0.2      0.61   3.7e+03     258     283 ..     428     453 ..     424     459 .. 0.75

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 3.3e-12
                 TSTT--SHHHHHH...........HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHH CS
    Sugar_tr  31 nfglsksksskee........ssvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasv 121
                  f l+++  ++ +        s + ++++  ++l  a+ + l+ g++   f  k++++i++++f  g+ ++++a+   ++  +i++R ++G+g  + +v
  KHJ32924.1  44 LFALDNTIVANVQpvivlefnSISKLSWMSTALLMTAASTNLIWGKVFAQFEAKWTYIICVAMFELGSGICGLAQ---NMDTMIIARAICGLGGSGMYV 139
                 444444444444455555555566788999999999***************************************...9******************** PP

                 HHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGG CS
    Sugar_tr 122 lvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllf 190
                  v ++i+ +++ + R   +s++ l + +G +++ i+g +++ + +  gwr+ ++++l++ l+   + +f
  KHJ32924.1 140 GVLTLIAANTTIRERPLYISFTGLVWGLGTVLGPIIGGAFSVSAG--GWRWSFYINLIIGLVCTPVYIF 206
                 ****************************************99988..9***********9776655555 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0016
                 HHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTT.HHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHH CS
    Sugar_tr  23 ltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfG.RkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGl 118
                 lt++    +f++++++s+ e+     g+ +  +++  i+G ++ g++   +G + + ++i++v++++g++l+++ ++++s+  ++   v++G g+Gl
  KHJ32924.1 316 LTIYMIPIFFQFTRNDSALES-----GIRLLPYIFLLIFGIFLNGFVLSLYGlYMPWFVIGSVFSIVGGALMYTVTSTTSIATVYGYSVILGWGLGL 407
                 555555567888888887775.....99999999999***************44677899************************999********97 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 0.61
                 HHHHHHHHHHTTHHHHHHHTTTHHHH CS
    Sugar_tr 258 gvvlqifqqltGinaimyysptifen 283
                 +++  ++ ql+Gi +i+  + +if n
  KHJ32924.1 428 AIGFISCAQLSGITIILSTANSIFLN 453
                 55566788999999998888888865 PP

>> DEFB136  Beta defensin 136
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.1   0.00039       2.3      22      35 ..      27      40 ..      25      43 .. 0.91
   2 ?    1.3   0.1     0.058   3.5e+02      23      46 ..     185     209 ..     177     212 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00039
     DEFB136 22 lGwkwvafChnils 35
                 Gwkw+af   +ls
  KHJ32924.1 27 TGWKWIAFMVAVLS 40
                5***********98 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.058
     DEFB136  23 GwkwvafChnils.CCkkdkkfkpP 46 
                 Gw+w  + + i+   C+    f +P
  KHJ32924.1 185 GWRWSFYINLIIGlVCTPVYIFLLP 209
                 9******999875357777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       850  (0.0474092); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 3655.88
//
Query:       KHJ32925.1  [L=1020]
Description: putative eukaryotic translation initiation factor 3 subunit a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-08   35.0   0.2    8.5e-08   32.7   0.2    2.3  1  PCI       PCI domain


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   0.2   4.8e-12   8.5e-08      10     104 ..     398     518 ..     389     519 .. 0.87

  Alignments for each domain:
  == domain 1  score: 32.7 bits;  conditional E-value: 4.8e-12
                 HHHTSHHHHHHHHHHH....................HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSH......HHHHHHHH CS
         PCI  10 lrsgnlsgfseelkdl....................eeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsv......devEkilv 82 
                 + +g l++++ e ++l                     +++ ad ++++++  L++++ +rl++q+s+ y+++++e +++l ++++      d +Ek+++
  KHJ32925.1 398 MSKGLLKRARPEIRELyrilevefhplsicqkispiLSKISADIDMEKYVVPLQQVILTRLFQQLSQVYETVDVEFVENLAKFPEpfkiakDTIEKFIM 496
                 455557777777777777777777777777777777678888999999*************************************************** PP

                 HHHHTTSSSEEEETTTTEEEEC CS
         PCI  83 klIrdgeirakidqesgivvfk 104
                 +  +++ ++ ++d+ +g+++f 
  KHJ32925.1 497 NGNKKDDLSIRMDHATGVLSFD 518
                 *******************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1020 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2507  (0.139829); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        92  (0.00513135); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.11u 0.30s 00:00:01.41 Elapsed: 00:00:00.51
# Mc/sec: 6026.73
//
Query:       KHJ32926.1  [L=92]
Description: putative guanine nucleotide-binding protein gamma subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-24   85.2   0.0    2.7e-24   84.9   0.0    1.1  1  G-gamma          GGL domain
  ------ inclusion threshold ------
      0.048   12.9   0.1      0.053   12.7   0.1    1.0  1  Phage_HK97_TLTM  Tail length tape measure protein


Domain annotation for each model (and alignments):
>> G-gamma  GGL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.9   0.0     3e-28   2.7e-24       2      68 .]      23      92 .]      22      92 .] 0.97

  Alignments for each domain:
  == domain 1  score: 84.9 bits;  conditional E-value: 3e-28
     G-gamma  2 qlklklkrei.eqLkkeLkrerikvSkAceelidYvestkDpllpevwgppsageNpwiek..sgcCwil 68
                 lkl++++e+ ++L+++L+reri+vS+A++++++Y++stkD+++p++wg ++++ +p+ ++  +gcC+++
  KHJ32926.1 23 DLKLRRLTELnTRLREDLERERIPVSQAAKSILNYTNSTKDYMVPSIWGSVDKKDDPYTPQqsGGCCVVM 92
                689**********************************************************999999987 PP

>> Phage_HK97_TLTM  Tail length tape measure protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   5.9e-06     0.053      50     111 ..       7      69 ..       4      82 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 5.9e-06
  Phage_HK97_TLTM  50 AreyAkeieevkeklkklsleevadekdklkeslkeqnklvkeaeqkveelkkeldkyq.vsi 111
                       re A+++++ k+ + +l+l  +++ + +l+e+l    + v++a + + +  +  + y  +si
       KHJ32926.1   7 SREDANHMKKTKQSMADLKLRRLTELNTRLREDLERERIPVSQAAKSILNYTNSTKDYMvPSI 69 
                      6999****************************************9999888887777764455 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       747  (0.0416643); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 684.85
//
Query:       KHJ32927.1  [L=165]
Description: putative atp synthase delta mitochondrial precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-17   63.3   0.4    8.2e-17   60.9   0.1    1.9  2  ATP-synt_DE_N  ATP synthase, Delta/Epsilon chain, beta-sandwi


Domain annotation for each model (and alignments):
>> ATP-synt_DE_N  ATP synthase, Delta/Epsilon chain, beta-sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.9   0.1   4.6e-21   8.2e-17       2      71 ..      36     106 ..      35     115 .. 0.92
   2 ?    0.3   0.0     0.037   6.6e+02      21      34 ..     137     150 ..     126     155 .. 0.81

  Alignments for each domain:
  == domain 1  score: 60.9 bits;  conditional E-value: 4.6e-21
                    EEEEEESSSEEEEEE.EEEEEEEESSSEEEE-TT--SEEEEEESEEEEEEEGGGEEEEEEESSEEEEEETT CS
  ATP-synt_DE_N   2 kleivtpervvfsge.veevvaptteGelgilpgHaplitaLkpgelriktedgeeesiavsgGflevqdn 71 
                    kl++  p +++f+ + v +v +pt +Ge+g+l++H+p i +Lkpg +++ +e g  +++++sgGf+ +q++
     KHJ32927.1  36 KLSLALPHQSIFKSQdVVQVNIPTVTGEMGVLAKHVPSIEQLKPGLVEVIEESGGSKKFFLSGGFAVIQPD 106
                    789999******9999*****************************************************64 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.037
                    EEEESSSEEEE-TT CS
  ATP-synt_DE_N  21 vaptteGelgilpg 34 
                     a ++eGe g+ + 
     KHJ32927.1 137 NASGAEGEQGVAEA 150
                    68899****99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1256.82
//
Query:       KHJ32928.1  [L=569]
Description: putative fact complex subunit pob3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.9e-32  109.7   0.4    1.7e-29  102.1   0.1    2.6  2  POB3_N    POB3-like N-terminal PH domain
    2.1e-29  101.2   0.1    1.2e-28   98.8   0.0    2.4  2  SSrecog   Structure-specific recognition protein (SSRP1)
    1.7e-24   86.0   0.2    1.8e-23   82.8   0.2    2.4  2  Rtt106    Histone chaperone Rttp106-like
  ------ inclusion threshold ------
          3    6.0  12.0        4.6    5.4  12.0    1.3  1  CDC45     CDC45-like protein


Domain annotation for each model (and alignments):
>> POB3_N  POB3-like N-terminal PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.1   0.1   3.8e-33   1.7e-29       2      93 .]      22     113 ..      21     113 .. 0.98
   2 !    5.1   0.0    0.0068        30      50      84 ..     439     473 ..     434     481 .. 0.91

  Alignments for each domain:
  == domain 1  score: 102.1 bits;  conditional E-value: 3.8e-33
      POB3_N   2 efeniylelsgdsGklrlsesglgwknsktgkvvqikasdissaqWvrvargyqLrillkdgkvvrfdGFkeedfdkLskllkknfnielek 93 
                 +f+niyl+ls+ sGk+r++e+glgwk+s++g+++++++++i  aqW+r+a+gy+L+ill+++++v++dGF++ed+d+Lsk +k++++ +l++
  KHJ32928.1  22 SFDNIYLDLSKVSGKCRFAETGLGWKPSGGGEAFTLDHTNIGAAQWSRAAKGYELKILLRNSGLVQLDGFSHEDYDRLSKIFKNWYSTNLQH 113
                 8**************************************************************************************99975 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0068
      POB3_N  50 vargyqLrillkdgkvvrfdGFkeedfdkLskllk 84 
                 ++r++ + +++k+g+  +f+  ++e++++L++++k
  KHJ32928.1 439 ASRTFDITVKMKEGTESQFSNINREEQSQLEEFFK 473
                 679999****************************9 PP

>> SSrecog  Structure-specific recognition protein (SSRP1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.8   0.0   2.7e-32   1.2e-28       1      68 [.     120     205 ..     120     206 .. 0.93
   2 ?   -1.8   0.0      0.66   2.9e+03      38      52 ..     329     343 ..     324     364 .. 0.68

  Alignments for each domain:
  == domain 1  score: 98.8 bits;  conditional E-value: 2.7e-32
     SSrecog   1 GwNwGkaefegselvfqvdnkpafeiplsevsncnlagknEvaleFh..qdddaaene................dqLvEmRfyvPg 68 
                 GwNwGk ef ++el+f+v+n+pafeip+se+sn+nlagknEvaleF    + + ++n+                dqLvEmRfy+Pg
  KHJ32928.1 120 GWNWGKGEFGKAELAFNVQNRPAFEIPYSEISNTNLAGKNEVALEFTlpANGHDNVNGslgganskgrragagkDQLVEMRFYIPG 205
                 9*********************************************976555555555999************************8 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.66
     SSrecog  38 gknEvaleFhqddda 52 
                 + +Ev+++++  ++ 
  KHJ32928.1 329 KDEEVTIDLNMTEEM 343
                 446788887755554 PP

>> Rtt106  Histone chaperone Rttp106-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.26   1.2e+03      25      43 ..     138     156 ..     132     173 .. 0.82
   2 !   82.8   0.2   3.9e-27   1.8e-23       1      87 [.     390     479 ..     390     481 .. 0.96

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.26
      Rtt106  25 fkkPllfiplediesvsfe 43 
                  ++P++ ip+++i+  +++
  KHJ32928.1 138 QNRPAFEIPYSEISNTNLA 156
                 579***********99987 PP

  == domain 2  score: 82.8 bits;  conditional E-value: 3.9e-27
      Rtt106   1 vgVkasrkakeGlLyflekgllfgfkkPllfiplediesvsfeRv...svtsrtfdlvvelkk.eeveFsmidqeelegidefvkskgiki 87 
                 +g+k+s ka+eG+Ly+lek+++f ++kP++fi++++i+++ ++R+    ++srtfd++v++k+ +e +Fs+i++ee+ +++ef+k k++k 
  KHJ32928.1 390 YGIKCSIKASEGFLYCLEKAFMF-VPKPATFIQFDHIDRIVLSRIggaISASRTFDITVKMKEgTESQFSNINREEQSQLEEFFKIKNLKT 479
                 58*********************.**********************99899**********889***********************9985 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  12.0     0.001       4.6     128     194 ..     499     568 ..     425     569 .] 0.57

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.001
       CDC45 128 eeeesdeede.......eeeeeddddeeeeeeeeedeedeeedeeeskkkrksksdeeeesddddersrkrrrs 194
                 ++  sd+  e       +++e+d+d++ +e+ ++++e+d  e+ +++  +++ +s +e+e+++++er++k+ r+
  KHJ32928.1 499 DMASSDD--EeivarsnRDSEDDEDESVDEDFKTDTESDVAEEYDSA--HESVESGSEKEDKEKNERPKKKART 568
                 2222221..12355322333333333333333333333333333332..2233333444466777888888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       900  (0.050198); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.39
# Mc/sec: 4353.06
//
Query:       KHJ32929.1  [L=325]
Description: putative serine threonine-protein phosphatase pp1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-39  136.6   0.1      2e-39  136.2   0.1    1.2  1  Metallophos  Calcineurin-like phosphoesterase
    4.3e-22   78.3   2.2    5.8e-22   77.9   1.4    1.7  2  STPPase_N    Serine-threonine protein phosphatase N-terminal 


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.2   0.1   2.2e-43     2e-39       2     201 ..      58     249 ..      57     252 .. 0.94

  Alignments for each domain:
  == domain 1  score: 136.2 bits;  conditional E-value: 2.2e-43
                  EEEEEESBTBTTCCTHHHHHHHHHHHH..HHHTTESEEEEESTSSSSSHHHHHHHHH.HHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddl..lreekpdlvllaGDlvdrgdlekellel.laalvkypipvylllGNHe........gfeeellnkygyl 88 
                  +i ++gD+H     gq++dll+l++    ++e  ++l+l  GD+vdrg  + e++ l la+++ky  ++++l+GNHe        gf++e++++y   
   KHJ32929.1  58 PIKICGDIH-----GQYYDLLRLFEYGgfPPE-ANYLFL--GDYVDRGKQSLETICLlLAYKIKYSENFFILRGNHEcasinriyGFYDECKRRYN-- 145
                  6889*****.....**********77753555.99****..*******77777777779***********************************99.. PP

                  HHHHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEETHHHHHHHHHHHSCHHHHCC...HHHHHHHHHHTTCSEEEEEESSESSCSSSCSCCHH CS
  Metallophos  89 gifsepwrsdaevfnnlplaslgsgslkvlllhGg.spellvsldklgslnleleapepg...dewlkdlekrekadwvivlgHsplyrgsgylfgde 182
                      ++w++++++fn+lp+a++++   k++++hGg sp+l +s ++++++ +++++p+ g   d++++d       + + + g+s + rg + +fg++
   KHJ32929.1 146 ---IKLWKTFTDCFNCLPIAAIIDE--KIFTMHGGlSPDL-NSMEQIRRVMRPTDIPDCGllcDLLWSD-------PDKDITGWSENDRGVSFTFGPD 230
                  ...99********************..********77777.****************************.......********************** PP

                  HHHHHHHHTTESEEEEESS CS
  Metallophos 183 aledllkkygvdlvisGHt 201
                  ++ ++l+k++ dl++++H+
   KHJ32929.1 231 VVSRFLQKHDMDLICRAHQ 249
                  ******************8 PP

>> STPPase_N  Serine-threonine protein phosphatase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.9   1.4   6.5e-26   5.8e-22       1      48 []       9      56 ..       9      56 .. 0.96
   2 ?   -3.5   0.0       1.7   1.6e+04      22      32 ..     236     246 ..     235     247 .. 0.82

  Alignments for each domain:
  == domain 1  score: 77.9 bits;  conditional E-value: 6.5e-26
   STPPase_N  1 vDdiIerLlevrgkpggkkvqLseaEIrqlCakareiFLsQPtLLeLe 48
                + +iI+rLlevrg+++gk+vqL eaEIr+lC+kareiF+sQP+LLeLe
  KHJ32929.1  9 LESIIDRLLEVRGSRPGKQVQLLEAEIRYLCTKAREIFISQPILLELE 56
                579**********8888******************************7 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.7
   STPPase_N  22 LseaEIrqlCa 32 
                 L+ +++ ++C+
  KHJ32929.1 236 LQKHDMDLICR 246
                 77899999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2453.54
//
Query:       KHJ32930.1  [L=803]
Description: hypothetical protein EV44_g3289 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.12   12.7   0.2        1.1    9.6   0.0    2.3  2  DUF3239        Protein of unknown function (DUF3239)
       0.84    9.8   3.4       0.79    9.9   1.2    2.1  2  Spt4           Spt4/RpoE2 zinc finger
       0.92   10.0   6.9        1.5    9.3   0.1    2.9  3  Na_Ca_ex_C     C-terminal extension of sodium/calcium exchang
        2.3    8.5   4.3        5.9    7.2   4.3    1.8  1  zinc_ribbon_9  zinc-ribbon
        3.2    7.2   4.7        6.7    6.1   4.7    1.6  1  zf-RanBP       Zn-finger in Ran binding protein and others


Domain annotation for each model (and alignments):
>> DUF3239  Protein of unknown function (DUF3239)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0    0.0003       1.1      50     111 ..     123     185 ..     112     189 .. 0.86
   2 ?   -0.2   0.0      0.33   1.2e+03      61      92 ..     366     396 ..     352     409 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0003
                 EEEES--TT-S-STT-EEEEEEEEEEEECSSSCEECEEE.EEEGGGT---HHHHHHHHHHS-H CS
     DUF3239  50 lrtvtalpgverkvGervpsvavtgerssrsketweeis.pmpiaWgTkdekvlkraekaIpe 111
                 +rt   l  ++++vG+ vp+v +++++ s+ k+t++  s  + +a++ +d +  ++ +++I++
  KHJ32930.1 123 ARTKPDLCDKKAQVGTLVPTVKIKYDKPSSWKDTFKVASrSLGVACASPDVNSSQEKANSINN 185
                 67788888899***********************998763678*******9998888888865 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.33
                 -STT-EEEEEEEEEEEECSSSCEECEEEEEEG CS
     DUF3239  61 rkvGervpsvavtgerssrsketweeispmpi 92 
                 r+  +rv +   +++++sr+k+ we  +p+p 
  KHJ32930.1 366 REFSQRVNTYK-STRENSREKKDWETANPVPF 396
                 56667777777.56777788999******996 PP

>> Spt4  Spt4/RpoE2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       2.8   9.9e+03      34      47 ..      94     107 ..      90     111 .. 0.83
   2 ?    9.9   1.2   0.00022      0.79       4      38 ..     272     304 ..     270     309 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 2.8
        Spt4  34 ekvsectseefeGl 47 
                 e+++ +t+++++G+
  KHJ32930.1  94 EETQYETTHSYNGI 107
                 6788899*****97 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00022
        Spt4   4 CllCklvktedqFeeegCpnC.eilelkgdkekvse 38 
                 C++C++++++++     C nC ++l+ ++d ++ ++
  KHJ32930.1 272 CHRCSFINKKNA---AVCYNCeNLLKSHNDLRENQN 304
                 ***********9...9*****889988887666655 PP

>> Na_Ca_ex_C  C-terminal extension of sodium/calcium exchanger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.1   0.00043       1.5      49      99 ..     291     341 ..     252     343 .. 0.83
   2 ?   -3.4   0.1       3.6   1.3e+04      47      47 ..     524     524 ..     491     559 .. 0.50
   3 ?    3.5   0.6     0.026        93      48      87 ..     669     712 ..     630     722 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00043
  Na_Ca_ex_C  49 eeseeakdleesrkevirilkelkqkyPdkdleqleelanyeaLskqqKSR 99 
                 +  ++++dl e+++ + r  +el  + Pd + +q  el + + ++k q+SR
  KHJ32930.1 291 NLLKSHNDLRENQNSIARPNRELESNDPDIHKKQFLELDSTSFIRKSQRSR 341
                 44567889999***************************************9 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 3.6
  Na_Ca_ex_C  47 e 47 
                 +
  KHJ32930.1 524 T 524
                 1 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.026
  Na_Ca_ex_C  48 a....eeseeakdleesrkevirilkelkqkyPdkdleqleela 87 
                 +    +e +++ d+e ++   i+i k +k + P+ + +++ +l 
  KHJ32930.1 669 EasvtSEIDAKSDNERKKLRRIKIAKKIKLNLPQITDQTVNNLE 712
                 033334455666666777778************99888887764 PP

>> zinc_ribbon_9  zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   4.3    0.0016       5.9       1      28 [.     268     290 ..     268     292 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0016
  zinc_ribbon_9   1 qsyWChqCdrfVsvspdedsdvlCPhCg 28 
                    ++y+Ch+C+ f++   +++++v C +C+
     KHJ32930.1 268 THYYCHRCS-FIN---KKNAAV-CYNCE 290
                    68*******.888...466777.99997 PP

>> zf-RanBP  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   4.7    0.0019       6.7       7      27 ..     272     292 ..     271     295 .. 0.94

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0019
                 -SSS--EEESSSSB-TTT--B CS
    zf-RanBP   7 CskClvqNfawstkCvaCqap 27 
                 C+ C++ N+  + +C +C+++
  KHJ32930.1 272 CHRCSFINKKNAAVCYNCENL 292
                 *******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (803 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1092  (0.0609069); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.41
# Mc/sec: 5928.78
//
Query:       KHJ32931.1  [L=1443]
Description: putative heat repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-50  172.4   1.8    2.2e-50  171.4   1.8    1.5  1  DUF2428          Putative death-receptor fusion protein (DUF2
     0.0049   17.0   3.5         38    4.9   0.1    5.9  6  HEAT             HEAT repeat
  ------ inclusion threshold ------
       0.04   14.0   2.4      0.071   13.2   0.1    2.7  2  DnaGprimase_HBD  DnaG-primase C-terminal, helicase-binding do
      0.094   13.1   0.0         59    4.2   0.0    3.9  3  HEAT_2           HEAT repeats


Domain annotation for each model (and alignments):
>> DUF2428  Putative death-receptor fusion protein (DUF2428)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.4   1.8     5e-54   2.2e-50       3     275 .]     515     743 ..     513     743 .. 0.91

  Alignments for each domain:
  == domain 1  score: 171.4 bits;  conditional E-value: 5e-54
     DUF2428   3 verllelcerisevvlpvvsssspegllpedldseeesaeeeeeeeeeeeeekkekeekkkvtaqvvlvccWrsmKevslllgtllqklplqtekessd 101
                 +++ +  ++ri+ vv+++++++spegll e l++                    +     +v+++ +l++++r+++e+s+ll+t+++k++++ ++ +  
  KHJ32931.1 515 LKNCVHFSSRIWFVVKHILCDDSPEGLLLEGLEEL-------------------D-----TVDTKDILSYSFRAIHESSNLLRTVMKKSQHSFTDYA-- 587
                 66778899******************999998741...................1.....3788**********************88887776653.. PP

     DUF2428 102 ssglltveqleeigelfleqLlelrHrGAfekayvgFtklcerllrskdeelqklpeqwleelleeikssssklcitRRSAGlPfliqallssepkksk 200
                     +++  +++ig+l +e L++lrHrGAf++++ +F+  c+   ++++     l+++wle+++ +++   ++ ++tRRSAG+P +i+a++s+ p+++ 
  KHJ32931.1 588 ---QMSTRIFTDIGNLSFEELSCLRHRGAFSTVSLTFAVSCKIAANNQS----NLLNTWLERAFICLQ---TQISTTRRSAGIPSIITAIISAIPRSG- 675
                 ...4667779********************************9998866....6************99...88999*****************99997. PP

     DUF2428 201 kklLkrtmkeLlelakkeaseeesesddesdlpqvhalNiLralfrdsrLgeevspyvadglilaiegfsspvWa 275
                    ++ ++ +Ll++ak+    +++++ d+ +lpqvhalN L+++f++ + + +v py++ +l++   +++s+vWa
  KHJ32931.1 676 ---FEDAIVKLLQIAKT----NTNSNLDQERLPQVHALNSLKEIFKSVTTSAKVGPYISGCLEVVGLCLNSQVWA 743
                 ...************96....444555999********************************************7 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1     0.052   2.3e+02       2      24 ..     326     348 ..     325     354 .. 0.86
   2 !    4.9   0.1    0.0085        38       8      30 ..     736     758 ..     730     759 .. 0.86
   3 ?   -0.1   0.0      0.34   1.5e+03       4      27 ..     835     858 ..     834     861 .. 0.82
   4 ?   -1.0   0.0      0.65   2.9e+03       9      29 ..    1058    1079 ..    1050    1081 .. 0.81
   5 ?   -3.8   0.0         4   1.8e+04      17      28 ..    1163    1174 ..    1161    1176 .. 0.82
   6 ?    3.7   0.0     0.022        97       5      22 ..    1197    1214 ..    1193    1217 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.052
                 HHHHHHHHT-SSHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaL 24 
                 + ll+ ll Dp  +VR  A + L
  KHJ32931.1 326 IKLLIDLLVDPFEDVRILASNIL 348
                 6799************9997665 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0085
                 HHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   8 llsDpspeVReaAakaLgalaev 30 
                 +l+++ + +R +A+  L  l+ +
  KHJ32931.1 736 CLNSQVWAIRNSALILLRSLIDH 758
                 57***************999887 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.34
                 HHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgal 27 
                 +l +ll ++ ++ Re  a+ + al
  KHJ32931.1 835 ILFNLLGSKQWHLREQGARMIMAL 858
                 578999********9988766665 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 0.65
                  H.T-SSHHHHHHHHHHHHHHHH CS
        HEAT    9 l.sDpspeVReaAakaLgalae 29  
                  l ++++++V +a +  + +++e
  KHJ32931.1 1058 LgNSEDSDVVCAILDVVPQIVE 1079
                  5599********9999999987 PP

  == domain 5  score: -3.8 bits;  conditional E-value: 4
                  HHHHHHHHHHHH CS
        HEAT   17 ReaAakaLgala 28  
                  R+a+ ka+ +++
  KHJ32931.1 1163 RYAVTKAIQKFY 1174
                  99*****99876 PP

  == domain 6  score: 3.7 bits;  conditional E-value: 0.022
                  HHHHHT-SSHHHHHHHHH CS
        HEAT    5 llkllsDpspeVReaAak 22  
                  l++ll D++ e+R+ Aa+
  KHJ32931.1 1197 LMTLLIDDDDEIRKLAAL 1214
                  78999**********985 PP

>> DnaGprimase_HBD  DnaG-primase C-terminal, helicase-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.2         2   8.7e+03      60      84 ..     892     917 ..     886     935 .. 0.63
   2 ?   13.2   0.1   1.6e-05     0.071       8      63 ..     957    1014 ..     952    1022 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 2
                      ---T..T-HHHHHHHHHHHHHHHHHH CS
  DnaGprimase_HBD  60 kald.eealkeeLrlllikyyeqklk 84 
                       +l+  + +k+eL+++ + y++   +
       KHJ32931.1 892 IMLEhVDMFKHELVKFNHIYCQIFTQ 917
                      44444567777777777777665554 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 1.6e-05
                       HHHHHH-CHHHHHHTT..T--GGG-SS-HHHHHHHHTT-TT-HHHHHHHH-TT----T CS
  DnaGprimase_HBD    8 iktllekpelldsvld..yidaslfkykkeefelllqgelddpkLlailldeklkald 63  
                       ik+llek ++l +  +   i ++  ++++  f++ ++g+l++  + +i+l++kl +l 
       KHJ32931.1  957 IKSLLEKTQTLAQFSEtqTIASTATTKYSLDFSIYCRGQLKHDMITSIVLRDKLAILR 1014
                       9**********9986522799999999999************************9887 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.013        59      30      53 ..     323     346 ..     319     355 .. 0.83
   2 ?    1.9   0.0     0.067     3e+02      31      62 ..     831     862 ..     792     875 .. 0.77
   3 ?    1.5   0.0      0.09     4e+02      66      84 ..    1196    1214 ..    1147    1223 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.013
      HEAT_2  30 pealpaLvellededpavRraaae 53 
                 pe++++L++ll d+ ++vR  a +
  KHJ32931.1 323 PEVIKLLIDLLVDPFEDVRILASN 346
                 788999999999999999988765 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.067
      HEAT_2  31 ealpaLvellededpavRraaaeaLgaigdpe 62 
                 e  ++L++ll ++ ++ R++ a+ + a++d+ 
  KHJ32931.1 831 EFKKILFNLLGSKQWHLREQGARMIMALQDQG 862
                 56789***************999999998765 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.09
      HEAT_2   66 aLkellddddddvvReaAa 84  
                  +L  ll dddd++++ aA+
  KHJ32931.1 1196 ILMTLLIDDDDEIRKLAAL 1214
                  5667788887777777664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1443 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       589  (0.0328518); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.84u 0.26s 00:00:01.10 Elapsed: 00:00:00.45
# Mc/sec: 9571.90
//
Query:       KHJ32932.1  [L=222]
Description: putative mitochondrial import inner membrane translocase subunit tim23 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-25   88.4   4.4    5.7e-25   87.8   4.4    1.2  1  Tim17     Tim17/Tim22/Tim23/Pmp24 family


Domain annotation for each model (and alignments):
>> Tim17  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.8   4.4   3.2e-29   5.7e-25       2     110 ..     101     210 ..     100     211 .. 0.96

  Alignments for each domain:
  == domain 1  score: 87.8 bits;  conditional E-value: 3.2e-29
       Tim17   2 vyktglsgvlGallGavfglvkgsrradtpapskerlreglrsvgkrgpslGknfgvvgglysgiecaleklRgkediwnsvaAGaltGallr..agpq 98 
                 +y tg++++ ++ +G+++gl +g+rr+   +  k+rl+++l+++++rgp+lG+++gv++++y+g+++++ ++Rgk+d  ns++AGal+G+l++   g++
  KHJ32932.1 101 CYGTGVTYLTALTVGGAWGLQEGLRRSVG-QAPKLRLNSALNAITRRGPFLGNSAGVIALVYNGFNSLIGNFRGKHDSFNSIVAGALSGMLFKstRGVR 198
                 899************************98.999***********************************************************77899** PP

       Tim17  99 aaavgaiggaaf 110
                 ++++++ ++a +
  KHJ32932.1 199 PMMISGSIVATV 210
                 ****99998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1623.60
//
Query:       KHJ32933.1  [L=414]
Description: hypothetical protein EV44_g3076 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.085   13.3   0.0       0.18   12.2   0.0    1.4  1  DUF150    RimP N-terminal domain


Domain annotation for each model (and alignments):
>> DUF150  RimP N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     1e-05      0.18      44      70 ..     272     298 ..     268     299 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1e-05
      DUF150  44 kvSraisalLdvedpieeeYtLEVsSP 70 
                 ++S ++ ++Ld e pi  +++LE+  P
  KHJ32933.1 272 NLSSQVLPKLDIEKPIAPNFFLELKGP 298
                 79*********************8766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.20s 00:00:00.69 Elapsed: 00:00:00.36
# Mc/sec: 3462.89
//
Query:       KHJ32934.1  [L=318]
Description: hypothetical protein EV44_g3999 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       465  (0.0259356); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2415.96
//
Query:       KHJ32935.1  [L=367]
Description: putative translocation protein sec62 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-71  240.7   0.8    1.2e-71  240.7   0.8    1.5  2  Sec62     Translocation protein Sec62


Domain annotation for each model (and alignments):
>> Sec62  Translocation protein Sec62
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.4      0.16     3e+03      58      68 ..      52      62 ..      20      81 .. 0.39
   2 !  240.7   0.8   6.4e-76   1.2e-71       1     212 [.     120     330 ..     120     334 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.16
       Sec62 58 klkekekkkkk 68
                k k++ ++++ 
  KHJ32935.1 52 KIKAQAAAAHA 62
                11111111111 PP

  == domain 2  score: 240.7 bits;  conditional E-value: 6.4e-76
       Sec62   1 kkkdffrakkvvralksekekkkskkkkeklkevkkkekaekvfkelkksqlalrvekl...kekekkkkkeekkkkkkkkkkvkleieeeqefvddne 96 
                 ++k++fr+k++ ral+s+++k+++kk++  l+e++++++ e++f++l+ s lal+v+k    k++ +++ +++ kk+k+ k+ +++eie++qe+ +++ 
  KHJ32935.1 120 QRKEMFRVKRAYRALESPAYKEAQKKNP-LLPEITDRTSLENTFRLLPLSFLALQVSKVdpcKDSCSSSGSHSLKKTKRIKGLWTVEIEQHQEC-REDL 216
                 689***********************98.9****************************9775444444444558999*****************.**** PP

       Sec62  97 vYvWiYepkqlktlligllvvvailavvlFPLWPaelrkgvyYLSiaalgllglilalaivRlilflivllvtkgklhlWlfPnlfeDvGfldSFrPlY 195
                 ++vW+Ye++q+k++l+++++++ +++vv+FPLWP++lr gv+YLS+++l+l+gl++++ai+Rlilf+i+++v++++  lWl+PnlfeDvGf+dSFrPl+
  KHJ32935.1 217 HFVWLYEGPQIKQKLYATGAIACVFVVVMFPLWPVKLRLGVWYLSMGMLVLIGLFFVMAIFRLILFIITMFVVPPG--LWLYPNLFEDVGFFDSFRPLW 313
                 ****************************************************************************..********************* PP

       Sec62 196 eyeekdkkkkkkkkkkk 212
                 ++++++kk kkk k+++
  KHJ32935.1 314 GWQKEKKKGKKKVKNSN 330
                 ***65555555444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1437  (0.0801495); expected 358.6 (0.02)
Passed bias filter:                      746  (0.0416086); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.20s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 2833.74
//
Query:       KHJ32936.1  [L=360]
Description: hypothetical protein EV44_g5212 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.045   13.9   0.8      0.099   12.8   0.1    2.0  2  MbeD_MobD       MbeD/MobD like
      0.072   12.2  10.6      0.088   11.9   0.7    2.1  2  Tmemb_cc2       Predicted transmembrane and coiled-coil 2 pro
       0.68    9.9   5.0          3    7.9   2.7    2.5  2  Pox_A_type_inc  Viral A-type inclusion protein repeat


Domain annotation for each model (and alignments):
>> MbeD_MobD  MbeD/MobD like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       1.1   6.5e+03      33      42 ..     219     228 ..     204     240 .. 0.58
   2 ?   12.8   0.1   1.7e-05     0.099      33      62 ..     327     356 ..     305     358 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.1
   MbeD_MobD  33 lqrmfeltqr 42 
                 l +m+ ++q+
  KHJ32936.1 219 LLQMIHIEQQ 228
                 3344444444 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 1.7e-05
   MbeD_MobD  33 lqrmfeltqrenaaLseqvtgLsqQVesLs 62 
                 +q+ ++++ ren +L+ ++ +L  Q+++Ls
  KHJ32936.1 327 YQAESQMMTRENQMLRRRIRELEMQINELS 356
                 788999***********************8 PP

>> Tmemb_cc2  Predicted transmembrane and coiled-coil 2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   3.7    0.0047        28     162     255 ..     159     251 ..      92     257 .. 0.67
   2 ?   11.9   0.7   1.5e-05     0.088     204     276 ..     283     355 ..     262     357 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.0047
   Tmemb_cc2 162 gskslssstallvskskytsddesssssvesssadsnsnseestasasksaesesqeklekileelqeikeeqerleeelerlkeqlkkelkll 255
                  + s++ ++++ +++++yt + +s  +s  + s +sn n   s  + ++s e+e++++++ +l+ ++  +++  +l++  + l+++ +++ +++
  KHJ32936.1 159 LKLSAGLENFSDQNSPHYTTNSKSM-ASPFALSRESNHNRLPSLGEIHQSVEEEQEAQVNRLLQMIHIEQQNLWHLRNANDYLNTHTNSDEAVI 251
                 3333333444444444333333333.33335666666666666666799*****************9888999999999999999888876665 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 1.5e-05
   Tmemb_cc2 204 stasasksaesesqeklekileelqeikeeqerleeelerlkeqlkkelkllkqaLqeeryryerLEeqlndl 276
                 ++ +++ + +s+s+++ +++ ++++e+ke+ e ++ ++ +  + ++ e +++++  q  r r+++LE q+n+l
  KHJ32936.1 283 NNDRSDAHPNSTSSRRTASLGQAMTEWKEDGESFAWSFRDDPTVYQAESQMMTRENQMLRRRIRELEMQINEL 355
                 222224456678889999*****************************************************98 PP

>> Pox_A_type_inc  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.058   3.5e+02      12      20 ..      64      72 ..      63      74 .. 0.88
   2 ?    7.9   2.7   0.00049         3       6      18 ..     341     353 ..     336     354 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.058
  Pox_A_type_inc 12 DLErqLseC 20
                    +LE+ L++C
      KHJ32936.1 64 SLESFLAIC 72
                    7******** PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00049
  Pox_A_type_inc   6 lRsRIsDLErqLs 18 
                     lR+RI++LE q +
      KHJ32936.1 341 LRRRIRELEMQIN 353
                     9********8866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       806  (0.0449551); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.37
# Mc/sec: 2935.02
//
Query:       KHJ32937.1  [L=628]
Description: putative glycosyltransferase family 90 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.3e-14   51.7   2.5    8.9e-10   38.0   0.0    2.7  3  Glyco_transf_90  Glycosyl transferase family 90
  ------ inclusion threshold ------
       0.18   11.5   0.0       0.34   10.6   0.0    1.4  1  DDE_Tnp_4        DDE superfamily endonuclease


Domain annotation for each model (and alignments):
>> Glyco_transf_90  Glycosyl transferase family 90
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.3   5.4e-06     0.048       8      94 ..     139     215 ..     134     228 .. 0.82
   2 ?   -2.3   0.0      0.17   1.6e+03     106     146 ..     345     391 ..     335     414 .. 0.65
   3 !   38.0   0.0     1e-13   8.9e-10     209     322 ..     493     613 ..     475     620 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 5.4e-06
  Glyco_transf_90   8 dyfrvieeDLkpwretgitreaverakrkalfrlviingrvyvekykksvqtrdvftiwgilqLlrkypgklpDlelmfncdDrPvv 94 
                      d+f +i +DL+p+   gi   ++ +  ++ +++++i n+   v +       +d f + + l+++++++  lpD+++ +n +D P +
       KHJ32937.1 139 DFFDQIYNDLAPFW--GIQPSLMRKKADSYEMKISIRNH---VAS-----TGSDWFWTQIWLDMIKTLQDLLPDMDIALNAMDEPRI 215
                      79**********97..59999999887777777776543...333.....34568989999************************87 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.17
  Glyco_transf_90 106 ppPlfsycgdeetlDivfPdwsfwgwpev......nikrwslllkel 146
                        P+f  ++ +++ +i+ P+  +w+ +e         ++w+++l+++
       KHJ32937.1 345 LFPMFGGSKLHTNSEILLPAPIYWSNEERfsggtfHGGPWETKLNQV 391
                      56777777777788888888888877765555555556666666655 PP

  == domain 3  score: 38.0 bits;  conditional E-value: 1e-13
  Glyco_transf_90 209 sledqckhkYkiyieGvaasvsekyilacdslvllvkpeyydffsreLkplehYvPikskdk..lrdlkeavdw......gnahdekaqeiaee 294
                       + dq+++k+   i+G + s + +  l   sl ++  + + ++    L+p++h+vP++++       +++ + +      + +hde+a++ia +
       KHJ32937.1 493 MMGDQFQRKFLPDIDGNSFSGRYRGFLRSTSLPIK-ATIFREWHDCRLVPWKHFVPMDNRFLdfWGIMQYFLGYesdktkVPSHDEQAKNIALN 585
                      5779***********************99999876.579******************994222234456666663333223479********** PP

  Glyco_transf_90 295 gseFireeLkmddvydYmfhLlteYakl 322
                      g+e++++ L+ +d++ Y ++Ll eYa++
       KHJ32937.1 586 GQEWANKVLRTEDMQIYVLRLLLEYARV 613
                      **************************86 PP

>> DDE_Tnp_4  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   3.8e-05      0.34      34     127 ..      36     144 ..      29     147 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 3.8e-05
   DDE_Tnp_4  34 ivvdpngkiifvskgypGsvsDkeilensgllkalk..........ea....vkpg.dvilaDkgFklsekllvpykkkkkkqlseeevefnraiasar 117
                 + + ++  i+f++   +G  + ++i   s+l k  +          ++     +++ +++la ++F+l+       +k+++++  + +v f +a +++ 
  KHJ32937.1  36 FYIRQSSYILFLNPTSYGPHHYSHIHPLSPLQKEPNniqkktshpiDEliqgAEKKfEHLLAKRSFDLKTAAAAYREKRGRHPPPAFDVWFKYAQSRNA 134
                 567788899999999*****************99888877766655115555677779************55555555999999*************** PP

   DDE_Tnp_4 118 ihvErvigrl 127
                 i+vE+++  +
  KHJ32937.1 135 IIVEDFFDQI 144
                 ******9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (628 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.21s 00:00:00.76 Elapsed: 00:00:00.37
# Mc/sec: 5129.12
//
Query:       KHJ32938.1  [L=259]
Description: putative casein kinase substrate phosphoprotein pp28 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-29  101.3  21.7    3.1e-29  101.3  21.7    3.3  3  PP28            Casein kinase substrate phosphoprotein PP28
  ------ inclusion threshold ------
        3.2    6.5   9.9        1.2    7.9   1.1    2.2  2  Rhabdo_ncap     Rhabdovirus nucleocapsid protein


Domain annotation for each model (and alignments):
>> PP28  Casein kinase substrate phosphoprotein PP28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   3.2     0.019   1.7e+02      20      49 ..      60     100 ..      39     105 .. 0.65
   2 !  101.3  21.7   3.4e-33   3.1e-29       1      85 []     126     224 ..     126     224 .. 0.95
   3 ?   -1.3   3.9      0.34   3.1e+03      33      44 ..     224     235 ..     222     254 .. 0.62

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.019
        PP28  20 e...........kkaekpkelsRrEreaiekqkakeryekl 49 
                 +           +   +pk lsR Er  + k+k+++   k 
  KHJ32938.1  60 DndesseeepseTGIGQPKILSREERRIAAKAKKQAAIAKK 100
                 13345666666566778889******888777777766665 PP

  == domain 2  score: 101.3 bits;  conditional E-value: 3.4e-33
        PP28   1 NPNrvkkkknqklaealdee.............kkaekpk.elsRrEreaiekqkakeryeklhaegkTeeakaDLaRLalireqReeaaakreaekee 85 
                 NPN++k+++nq+ ++++d +             +++ ++  elsRrEreai++q+a+ery+klh++gkT+eakaDLaRL+l+re+Re++aa+++aekee
  KHJ32938.1 126 NPNHSKAARNQTRTTSTDIDnaankvkdlninrTAKGRTVgELSRREREAIQAQQARERYQKLHEAGKTDEAKADLARLKLVREKREAEAARKQAEKEE 224
                 9***********9997776699**********877777789********************************************************96 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.34
        PP28  33 Ereaiekqkake 44 
                 Ere++ek+k+ e
  KHJ32938.1 224 EREEAEKAKKDE 235
                 455555544443 PP

>> Rhabdo_ncap  Rhabdovirus nucleocapsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   1.1   0.00014       1.2     346     403 ..      40      97 ..      17     105 .. 0.77
   2 ?    3.3   2.0    0.0034        30     327     373 ..     192     238 ..     162     251 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00014
                  --S-SST-SSSSSSS-.............-SSS-HHHHHHHHHHTTTS--HHHHHHHH CS
  Rhabdo_ncap 346 klaekeaeegsktdvaladdGdvddddeepkssdvvewlavyesqnvkltkkvkeyik 403
                  +  ++ + e+s  +++++dd ++++ +eep  ++  ++ ++  ++ ++ +k +k+ ++
   KHJ32938.1  40 NEIKRANDEASSSEEEEEDDDNDESSEEEPSETGIGQPKILSREERRIAAKAKKQAAI 97 
                  334444455666667777888899999***************9999999999998765 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.0034
                  HHHHHHS------EESSS---S-SST-SSSSSSS-............ CS
  Rhabdo_ncap 327 ayevsskaalekrFlkdedklaekeaeegsktdvaladdGdvdddde 373
                  +++  +ka+l++  l+ e++ ae   +++ k++ ++a++ ++d+  +
   KHJ32938.1 192 GKTDEAKADLARLKLVREKREAEAARKQAEKEEREEAEKAKKDEISA 238
                  3556789******************************9999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2705  (0.150873); expected 358.6 (0.02)
Passed bias filter:                      611  (0.0340789); expected 358.6 (0.02)
Passed Vit filter:                       117  (0.00652574); expected 17.9 (0.001)
Passed Fwd filter:                        50  (0.00278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.01u 0.36s 00:00:01.37 Elapsed: 00:00:00.50
# Mc/sec: 1547.44
//
Query:       KHJ32939.1  [L=1096]
Description: putative importin beta-3 subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-30  104.6   1.2    2.5e-30  104.6   1.2    4.7  5  Importin_rep_4  Importin repeat
    7.8e-20   71.0   8.7    1.1e-08   35.4   0.1    8.2  8  HEAT_EZ         HEAT-like repeat
    6.9e-17   61.6   2.2    7.9e-08   32.6   0.0    7.3  6  HEAT_2          HEAT repeats
    7.4e-17   61.4   4.9      3e-15   56.3   3.9    3.1  2  Importin_rep_5  Importin repeat
    2.3e-14   52.2  12.3      0.048   13.9   0.1    9.3  8  HEAT            HEAT repeat
    1.4e-12   47.7   3.4    2.3e-12   47.0   0.8    2.8  2  Importin_rep_6  Importin repeat 6
      3e-08   34.1   0.3       0.23   12.1   0.0    5.9  6  Vac14_Fab1_bd   Vacuolar 14 Fab1-binding region
    2.5e-07   30.5   0.9     0.0047   16.5   0.3    4.4  4  CLASP_N         CLASP N terminal
    2.6e-07   30.1  13.0    6.9e-07   28.7   1.4    4.5  4  MMS19_C         RNAPII transcription regulator C-terminal
    2.8e-07   30.5   5.5     0.0007   19.4   0.1    5.7  8  RIX1            rRNA processing/ribosome biogenesis
    4.2e-05   23.5   9.4        2.2    8.2   0.1    6.7  6  DUF3385         Domain of unknown function (DUF3385)
    0.00038   20.4   7.2      0.064   13.3   0.1    4.6  4  Arm             Armadillo/beta-catenin-like repeat
     0.0053   16.9   7.3       0.13   12.5   0.4    5.2  7  RTP1_C1         Required for nuclear transport of RNA pol II 
     0.0081   15.8   7.2       0.58    9.7   0.3    5.0  6  MMS19_N         Dos2-interacting transcription regulator of R
     0.0095   15.3   3.0       0.14   11.5   0.3    2.8  2  V-ATPase_H_N    V-ATPase subunit H
  ------ inclusion threshold ------
      0.011   15.0   0.1       0.74    8.9   0.0    3.4  3  Cnd3            Nuclear condensing complex subunits, C-term d
       0.13   12.7   4.3       0.48   10.9   0.9    3.2  2  Telomere_reg-2  Telomere length regulation protein


Domain annotation for each model (and alignments):
>> Importin_rep_4  Importin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.77   8.1e+02       7      53 ..     193     236 ..     188     243 .. 0.69
   2 ?    3.3   0.0     0.098     1e+02      11      29 ..     242     260 ..     232     273 .. 0.78
   3 !  104.6   1.2   2.4e-33   2.5e-30       1      89 [.     275     367 ..     275     368 .. 0.97
   4 ?   -2.0   0.0       4.2   4.4e+03       9      21 ..     678     690 ..     675     695 .. 0.86
   5 ?   -2.1   0.2       4.7     5e+03      48      68 ..     812     833 ..     764     838 .. 0.61

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.77
  Importin_rep_4   7 aaRqsalEllvtlaenaPkmvrkeaefteklvvqvLslmteveddee 53 
                     ++R +a+E ++++     ++ +k+++   +l+++vL+++  +++++e
      KHJ32939.1 193 TVRLAAMEAFASFF---RSLNKKSKQKYYELISEVLNILPPIKEKQE 236
                     56666666655554...45667777766789******9999966554 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.098
  Importin_rep_4  11 salEllvtlaenaPkmvrk 29 
                      al  l+ lae+aPkm+r 
      KHJ32939.1 242 RALLSLIDLAEAAPKMFRP 260
                     56777999********984 PP

  == domain 3  score: 104.6 bits;  conditional E-value: 2.4e-33
  Importin_rep_4   1 nkdledaaRqsalEllvtlaenaPkmvrkeaefteklvvqvLslmtev....eddeeWatsddlddddeedeyvaaeqalDRlalkLGGkall 89 
                     +k+l+d+aRq+alEl++t+a+ aP+mv+k++++++++++q+Ls+mt++    +d+ eW +s+d+d ++ + ++va+eq++DR+a+kLGG++ll
      KHJ32939.1 275 DKELSDQARQNALELMATFADFAPSMVKKDPTYVNDMITQCLSFMTDIgiddDDAVEWSNSEDMDPEESDLNHVAGEQCMDRMANKLGGATLL 367
                     69************************************************988999**********************************998 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 4.2
  Importin_rep_4   9 RqsalEllvtlae 21 
                     +++a+Ellv++a+
      KHJ32939.1 678 KHMAIELLVVYAQ 690
                     689******9986 PP

  == domain 5  score: -2.1 bits;  conditional E-value: 4.7
  Importin_rep_4  48 v.eddeeWatsddlddddeede 68 
                     v + +ee +++++ d d+e +e
      KHJ32939.1 812 VaNRAEEREEANQEDGDEEPEE 833
                     3456677777777777777655 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0    0.0074       7.9       4      53 ..     157     203 ..     155     205 .. 0.76
   2 ?   -0.5   0.0       1.8   1.9e+03       4      44 ..     283     330 ..     280     332 .. 0.77
   3 !   35.4   0.1     1e-11   1.1e-08       1      55 []     383     437 ..     383     437 .. 0.98
   4 !   14.8   0.1     3e-05     0.031      22      52 ..     446     476 ..     442     479 .. 0.91
   5 !   17.6   0.2     4e-06    0.0042       1      53 [.     466     519 ..     466     521 .. 0.93
   6 ?    6.7   0.0      0.01        11       3      45 ..     510     553 ..     508     561 .. 0.91
   7 ?   -1.3   0.1       3.1   3.3e+03      20      35 ..     617     632 ..     609     649 .. 0.71
   8 ?    0.5   0.1      0.86     9e+02       1      16 [.     924     939 ..     924     954 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0074
     HEAT_EZ   4 RraAawaLGrlaggepellqp.lvpeilpaLlalLnddsdeVRaaAagaLg 53 
                 R+ A++ +++     p+ +++ + + +l a+ ++ +dd+ +VR aA  a++
  KHJ32939.1 157 REIAYRIFST----TPRIIEKqHEDTVLSAFTKGFKDDDVTVRLAAMEAFA 203
                 6666666643....334444448889********************99986 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.8
     HEAT_EZ   4 RraAawaLGr.......laggepellqplvpeilpaLlalLnddsdeV 44 
                 R +A+  +++       +    p ++++++++ l ++     dd+d+V
  KHJ32939.1 283 RQNALELMATfadfapsMVKKDPTYVNDMITQCLSFMTDIGIDDDDAV 330
                 555666666666666667778899999999999999999999999988 PP

  == domain 3  score: 35.4 bits;  conditional E-value: 1e-11
     HEAT_EZ   1 wrvRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLgnl 55 
                 wr R+aA++a++++ +g+++l+ ++++++l++ +++L +++++VR+  + aLg++
  KHJ32939.1 383 WRDRHAALMAISAISEGCRDLMIGELSQVLDLVIPALHHPHPRVRWSGCNALGQM 437
                 888**************************************************97 PP

  == domain 4  score: 14.8 bits;  conditional E-value: 3e-05
     HEAT_EZ  22 lqplvpeilpaLlalLnddsdeVRaaAagaL 52 
                 +q++++++lpa ++ Ln+++++V+a Aa aL
  KHJ32939.1 446 QQKYHSVVLPAIIPVLNSPEPRVQAHAAAAL 476
                 789**************************99 PP

  == domain 5  score: 17.6 bits;  conditional E-value: 4e-06
     HEAT_EZ   1 wrvRraAawaLGr.laggepellqplvpeilpaLlalLnddsdeVRaaAagaLg 53 
                 +rv+++Aa+aL + +++ e+  l+p+++++l  L  lL++ +  V+++A+ +++
  KHJ32939.1 466 PRVQAHAAAALVNfCEEAEKSILEPYLDDLLTHLFVLLQSQKRYVQEQALSTIA 519
                 79*********99**************************988899***998886 PP

  == domain 6  score: 6.7 bits;  conditional E-value: 0.01
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilpaLlalLnddsd.eVR 45 
                 v++ A+++++++a  +  + +++   ++p+L + L+ +++ e+R
  KHJ32939.1 510 VQEQALSTIATIADSAEAAFSKYYVTLMPLLFQVLQQENSvEIR 553
                 89*******************************99999988775 PP

  == domain 7  score: -1.3 bits;  conditional E-value: 3.1
     HEAT_EZ  20 ellqplvpeilpaLla 35 
                 ++  p+++ ++p+Ll 
  KHJ32939.1 617 QDFVPFLSNVMPPLLD 632
                 5667899999***993 PP

  == domain 8  score: 0.5 bits;  conditional E-value: 0.86
     HEAT_EZ   1 wrvRraAawaLGrlag 16 
                 +++R aAa ++G +a 
  KHJ32939.1 924 PANRQAAAYGIGVAAH 939
                 689********98765 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.42   4.5e+02       4      56 ..      50     109 ..      49     138 .. 0.63
   2 ?    4.2   0.0     0.056        59      24      56 ..     171     203 ..     166     221 .. 0.83
   3 !   20.0   0.0   6.2e-07   0.00065       5      60 ..     374     439 ..     372     448 .. 0.83
   4 !   32.6   0.0   7.5e-11   7.9e-08       2      73 ..     413     494 ..     412     495 .. 0.88
   5 !    7.5   0.2     0.005       5.2       4      55 ..     499     560 ..     496     590 .. 0.81
   6 ?    2.7   0.0      0.16   1.7e+02       1      30 [.     912     940 ..     910    1000 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.42
      HEAT_2   4 LlqalendpdpevrraairaLgrignp.......ealpaLvellededpavRraaaeaLg 56 
                 L+++++ + dp+ r  a+    ri+++       ++++++++l + +   +R+   eaL+
  KHJ32939.1  50 LVEQIQGSNDPAKRSFAAVIFRRIASKtrklqnnQSVETFISLPTEQGHIIRQKLLEALS 109
                 678888888888888888777755555444555577777777777776777777777775 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.056
      HEAT_2  24 LgrignpealpaLvellededpavRraaaeaLg 56 
                 + +++++++l a+++  +d+d  vR aa ea +
  KHJ32939.1 171 IEKQHEDTVLSAFTKGFKDDDVTVRLAAMEAFA 203
                 55677888999999999***********99966 PP

  == domain 3  score: 20.0 bits;  conditional E-value: 6.2e-07
      HEAT_2   5 lqalendpdpevrraairaLgrignp..........ealpaLvellededpavRraaaeaLgaigd 60 
                 l ++ n+ ++  r+aa++a+  i +           ++l++++++l +++p+vR+  ++aLg++ +
  KHJ32939.1 374 LPRMMNSNSWRDRHAALMAISAISEGcrdlmigelsQVLDLVIPALHHPHPRVRWSGCNALGQMST 439
                 55666999*************55444445566666799************************9965 PP

  == domain 4  score: 32.6 bits;  conditional E-value: 7.5e-11
      HEAT_2   2 daLlqalendpdpevrraairaLgrignp...........ealpaLvellededpavRraaaeaLgaigdpealpaLkelldd 73 
                 d+ + al ++p+p vr+  + aLg++ ++            +lpa++++l++++p+v+++aa aL+ + +++  ++L+ +ldd
  KHJ32939.1 413 DLVIPAL-HHPHPRVRWSGCNALGQMSTDfagtmqqkyhsVVLPAIIPVLNSPEPRVQAHAAAALVNFCEEAEKSILEPYLDD 494
                 788999*.9***************777776666666555567**********************************9999976 PP

  == domain 5  score: 7.5 bits;  conditional E-value: 0.005
      HEAT_2   4 LlqalendpdpevrraairaLgrignp..........ealpaLvellededp.avRraaaeaL 55 
                 L  +l ++   +v+ +a+ ++++i++           +++p+L+++l+ e++ ++R   a+a+
  KHJ32939.1 499 LFVLL-QSQKRYVQEQALSTIATIADSaeaafskyyvTLMPLLFQVLQQENSvEIRLLRAKAM 560
                 55566.78999***********99887777777777777********8888437887777765 PP

  == domain 6  score: 2.7 bits;  conditional E-value: 0.16
      HEAT_2   1 ldaLlqalendpdpevrraairaLgrignp 30 
                 +++L++   +d+ p+ r+aa+  +g  +++
  KHJ32939.1 912 IEPLIAGC-RDAAPANRQAAAYGIGVAAHK 940
                 56788888.888888999999888854444 PP

>> Importin_rep_5  Importin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0      0.16   1.7e+02      28      41 ..     408     421 ..     401     423 .. 0.87
   2 !   56.3   3.9   2.8e-18     3e-15       1      52 [.    1011    1061 ..    1011    1062 .. 0.98

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.16
  Importin_rep_5  28 ipkvvdsVvqALea 41 
                     +++v+d V+ AL++
      KHJ32939.1 408 LSQVLDLVIPALHH 421
                     789**********9 PP

  == domain 2  score: 56.3 bits;  conditional E-value: 2.8e-18
  Importin_rep_5    1 DeEAApfaYrfLsqLIdqnhpaVlsqnipkvvdsVvqALeaksiqGktAekv 52  
                      DeEAAp+aY++L++LIdq++ aV+sq + k++ ++++A+ea+++q   A+++
      KHJ32939.1 1011 DEEAAPYAYAYLAELIDQHNIAVISQ-AGKIFLYIAKAIEAETLQHSVAARI 1061
                      9************************9.**********************998 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0         6   6.3e+03      10      29 ..      56      75 ..      49      76 .. 0.79
   2 !    9.5   0.0    0.0013       1.3       2      28 ..     180     206 ..     179     209 .. 0.89
   3 !    6.8   0.0    0.0091       9.6       7      31 .]     376     400 ..     374     400 .. 0.93
   4 !   13.9   0.0   4.7e-05      0.05       1      28 [.     411     438 ..     411     441 .. 0.92
   5 !   13.9   0.1   4.5e-05     0.048       1      29 [.     453     481 ..     453     483 .. 0.96
   6 ?    3.4   0.0      0.11   1.1e+02       1      29 [.     495     523 ..     495     525 .. 0.91
   7 ?   -2.2   0.1       7.1   7.5e+03       1      17 [.     536     553 ..     536     554 .. 0.75
   8 ?    3.3   0.0      0.12   1.2e+02       1      26 [.     911     936 ..     911     939 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 6
                T-SSHHHHHHHHHHHHHHHH CS
        HEAT 10 sDpspeVReaAakaLgalae 29
                 +++p  R+ Aa  + ++a+
  KHJ32939.1 56 GSNDPAKRSFAAVIFRRIAS 75
                57899999999999998886 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0013
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 l ++ k  +D++  VR aA +a++ + 
  KHJ32939.1 180 LSAFTKGFKDDDVTVRLAAMEAFASFF 206
                 78899******************9875 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0091
                 HHHT-SSHHHHHHHHHHHHHHHHCS CS
        HEAT   7 kllsDpspeVReaAakaLgalaevl 31 
                 ++++++s++ R aA+ a+ a++e++
  KHJ32939.1 376 RMMNSNSWRDRHAALMAISAISEGC 400
                 5889999****************98 PP

  == domain 4  score: 13.9 bits;  conditional E-value: 4.7e-05
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgala 28 
                 +l+l++ +l++p+p+VR + ++aLg+++
  KHJ32939.1 411 VLDLVIPALHHPHPRVRWSGCNALGQMS 438
                 58999*********************97 PP

  == domain 5  score: 13.9 bits;  conditional E-value: 4.5e-05
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 +lP+++  l++p+p+V + Aa aL++++e
  KHJ32939.1 453 VLPAIIPVLNSPEPRVQAHAAAALVNFCE 481
                 69**************************8 PP

  == domain 6  score: 3.4 bits;  conditional E-value: 0.11
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 ll +l  ll+++   V e A+ +++++a 
  KHJ32939.1 495 LLTHLFVLLQSQKRYVQEQALSTIATIAD 523
                 67899999*******************96 PP

  == domain 7  score: -2.2 bits;  conditional E-value: 7.1
                 HHHHHHHHH.T-SSHHHH CS
        HEAT   1 llPlllkll.sDpspeVR 17 
                 l+Pll + l + +s e+R
  KHJ32939.1 536 LMPLLFQVLqQENSVEIR 553
                 89***9999566666666 PP

  == domain 8  score: 3.3 bits;  conditional E-value: 0.12
                 HHHHHHHHHT-SSHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLga 26 
                 ++ +l+  ++D +p  R+aAa+ +g 
  KHJ32939.1 911 IIEPLIAGCRDAAPANRQAAAYGIGV 936
                 677889999*************9985 PP

>> Importin_rep_6  Importin repeat 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       2.8     3e+03      77     107 ..     517     547 ..     509     548 .. 0.87
   2 !   47.0   0.8   2.1e-15   2.3e-12       6     106 ..     774     880 ..     770     882 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.8
  Importin_rep_6  77 slaailkakkseylpalqtllplissylqde 107
                     ++a+i  +++ ++ + + tl+pl+  +lq+e
      KHJ32939.1 517 TIATIADSAEAAFSKYYVTLMPLLFQVLQQE 547
                     68999999999************99999976 PP

  == domain 2  score: 47.0 bits;  conditional E-value: 2.1e-15
  Importin_rep_6   6 hsalvdgleilganalsedqlakftkgvsanlsdvyervkereneddeyn.edvdddyddy.....tdedlldeinkslaailkakkseylpalq 94 
                     ++++ +++e++g+n+ls+++++ f +++++ l d  +rv +r +e +e n ed d++ ++       d++ll ++nk++ +i+k++++e+lp  +
      KHJ32939.1 774 YQCFYESVEVMGKNCLSQQNMETFINSATSALEDYKDRVANRAEEREEANqEDGDEEPEEVllaieDDQNLLSDMNKAFHCIFKNHGTEFLPSWE 868
                     78899**************************************999987647889998886443335889************************* PP

  Importin_rep_6  95 tllplissylqd 106
                     +l    + +l+ 
      KHJ32939.1 869 RLHGTYEQFLKS 880
                     **9988888875 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0    0.0076         8      22      73 ..     173     228 ..     159     250 .. 0.78
   2 ?   -2.5   0.0       7.5   7.9e+03      11      38 ..     294     321 ..     255     336 .. 0.72
   3 !    7.5   0.0    0.0057         6       2      51 ..     385     434 ..     384     445 .. 0.92
   4 !   12.1   0.0   0.00022      0.23       9      87 ..     433     513 ..     430     522 .. 0.86
   5 ?   -0.2   0.0       1.4   1.5e+03       5      77 ..     563     634 ..     559     642 .. 0.74
   6 ?   -1.9   0.0         5   5.3e+03      21      41 ..     904     924 ..     892     931 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0076
  Vac14_Fab1_bd  22 keyleeivkpvlkcfsDkdsrvRyyacEslyn....iakvakgevlkllneifdal 73 
                    k++ +++++   k f+D+d  vR  a+E++      + k++k++  +l++e++++l
     KHJ32939.1 173 KQHEDTVLSAFTKGFKDDDVTVRLAAMEAFASffrsLNKKSKQKYYELISEVLNIL 228
                    5667889999999***************8754111256777777777777777766 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 7.5
  Vac14_Fab1_bd  11 aavaialekkikeyleeivkpvlkcfsD 38 
                    a  a ++ kk  +y++++++  l+ ++D
     KHJ32939.1 294 ADFAPSMVKKDPTYVNDMITQCLSFMTD 321
                    4444455556666777777777776665 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.0057
  Vac14_Fab1_bd   2 arkggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEsl 51 
                     r+++l+++ a++ + +  +   l+++++ v+ +++    rvR+  c +l
     KHJ32939.1 385 DRHAALMAISAISEGCRDLMIGELSQVLDLVIPALHHPHPRVRWSGCNAL 434
                    58899***********9999999************************998 PP

  == domain 4  score: 12.1 bits;  conditional E-value: 0.00022
  Vac14_Fab1_bd   9 gLaavaialekk.ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlk.llneifdalvklvaDsdesvksg 87 
                    +L  ++ + + +  ++y + +++ ++ +++  + rv  +a+ +l n +  a++++l+ +l ++++ l+ l+  +++ v++ 
     KHJ32939.1 433 ALGQMSTDFAGTmQQKYHSVVLPAIIPVLNSPEPRVQAHAAAALVNFCEEAEKSILEpYLDDLLTHLFVLLQSQKRYVQEQ 513
                    66667777766646788899999*********************************879******9999998888888765 PP

  == domain 5  score: -0.2 bits;  conditional E-value: 1.4
  Vac14_Fab1_bd   5 ggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklv 77 
                    ++li+La     l++++ + + ++++ + ++++D+d+    y + +   +++v+ ++++ +l+++   l  l+
     KHJ32939.1 563 ATLIALAVGKERLGADTLNLV-HLLANIQQSITDADDPQAQYLMHCWGRMCRVMGQDFVPFLSNVMPPLLDLA 634
                    566666666666666665544.678889999999998888888888889999999999999988887776665 PP

  == domain 6  score: -1.9 bits;  conditional E-value: 5
  Vac14_Fab1_bd  21 ikeyleeivkpvlkcfsDkds 41 
                    + +y + i++p+++ ++D+  
     KHJ32939.1 904 SFKYSNYIIEPLIAGCRDAAP 924
                    567899999999999999765 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0024       2.5     169     215 ..     172     217 ..     152     228 .. 0.81
   2 ?    1.7   0.0      0.15   1.6e+02      19     123 ..     381     481 ..     372     484 .. 0.74
   3 !   16.5   0.3   4.5e-06    0.0047      55     149 ..     454     555 ..     432     599 .. 0.70
   4 ?    0.4   0.0      0.39   4.1e+02      74     109 ..     605     640 ..     601     641 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0024
     CLASP_N 169 easllldliekslkkgleDanptVRetaRstfweffkvwPsrAksll 215
                 e+++  d++  +++kg +D + tVR +a ++f +ff+   +++k+ +
  KHJ32939.1 172 EKQH-EDTVLSAFTKGFKDDDVTVRLAAMEAFASFFRSLNKKSKQKY 217
                 4444.588999**************************9999998766 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.15
     CLASP_N  19 lnwdaReknilklrslikgnvpedaveelleclkqlleailkalssLrttlsstgchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqa 117
                  +w+ R ++++ +  + +  + + ++ el ++l  ++ a+ + +  +r +++++++++  ++a + +++  ++   +lp ++ +l +   ++ + a++a
  KHJ32939.1 381 NSWRDRHAALMAISAI-SEGCRDLMIGELSQVLDLVIPALHHPHPRVRWSGCNALGQMSTDFAGTMQQKYHSV---VLPAIIPVLNSPEPRVQAHAAAA 475
                 5788888888888555.44468888899999999889999999999999999999999999888888876554...56666666667777777777766 PP

     CLASP_N 118 laalls 123
                 l  +++
  KHJ32939.1 476 LVNFCE 481
                 666655 PP

  == domain 3  score: 16.5 bits;  conditional E-value: 4.5e-06
     CLASP_N  55 leailkalssLrttlsstgchllkelaiqlkeq.ldpmveillptLlkllgdtKkiisqnanqalaallsnas.....fspri.lqvlsvalqdKnvqp 146
                 l ai+  l+s    + +++   l +++++ +++ l+p+++ ll++L+ ll+++K  + ++a  ++a++  +a+     +   +   + +v+ q+ +v++
  KHJ32939.1 454 LPAIIPVLNSPEPRVQAHAAAALVNFCEEAEKSiLEPYLDDLLTHLFVLLQSQKRYVQEQALSTIATIADSAEaafskYYVTLmPLLFQVLQQENSVEI 552
                 5667777777777777777777777777777777**********************************9887633222333343444555556666666 PP

     CLASP_N 147 Rey 149
                 R+ 
  KHJ32939.1 553 RLL 555
                 655 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.39
     CLASP_N  74 chllkelaiqlkeqldpmveillptLlkllgdtKki 109
                 +h   +++++ ++++ p++ +++p Ll+l +++ +i
  KHJ32939.1 605 MHCWGRMCRVMGQDFVPFLSNVMPPLLDLASAKADI 640
                 5666799**********************9998776 PP

>> MMS19_C  RNAPII transcription regulator C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.6      0.13   1.4e+02     137     253 ..      79     238 ..      55     293 .. 0.50
   2 ?    3.8   0.0     0.025        26     344     398 ..     381     434 ..     372     446 .. 0.79
   3 !   28.7   1.4   6.6e-10   6.9e-07     326     422 ..     446     542 ..     443     543 .. 0.97
   4 ?    0.3   0.4      0.27   2.9e+02      87     137 ..    1043    1089 ..     957    1092 .. 0.47

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.13
     MMS19_C 137 qevleevvalfltgdask.......kfeplsesasesqkqli.....................................ilftailaalrkevklpdls 191
                 +   ++ v++f++  +++        +e ls+++++s+++ i                                      +   i +  ++ ++ +  +
  KHJ32939.1  79 KLQNNQSVETFISLPTEQghiirqkLLEALSSETETSTRNKIgdavaevarqysddklqwpeilgvlftlsmsqvmgqrEIAYRIFSTTPRIIEKQHED 177
                 444444444444444444444444444444444444444444444444444444444444444444444444444444333333444444444444444 PP

     MMS19_C 192 ellnellellaseaespflrlaylrllall...vNKflkdedlselldellesieeslieaedsq 253
                 ++l+++++    ++++ + rla+++++a++   +NK  k ++  el++e+l+ + +++++ ++s+
  KHJ32939.1 178 TVLSAFTK--GFKDDDVTVRLAAMEAFASFfrsLNKKSK-QKYYELISEVLNILPPIKEK-QESE 238
                 44444444..33334444555555544444222344442.22222333444433333333.2222 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.025
     MMS19_C 344 sdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdaevkastLetl 398
                 ++  ++ + L+A+s + +   ++l++ eL+++l l++ aL+ p + v+ s  + l
  KHJ32939.1 381 NSWRDRHAALMAISAISEG-CRDLMIGELSQVLDLVIPALHHPHPRVRWSGCNAL 434
                 5566788899999886554.589************************98876655 PP

  == domain 3  score: 28.7 bits;  conditional E-value: 6.6e-10
     MMS19_C 326 kQrfFstvlpklvegfkssdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdaevkastLetlksileespslvsehlssLvprLLk 422
                 +Q++ s vlp ++   +s ++  ++    AL + ++   ks+l p+L +Ll  L   L+ +++ v+  +L+t++ i++++++++s++  +L p L +
  KHJ32939.1 446 QQKYHSVVLPAIIPVLNSPEPRVQAHAAAALVNFCEEAEKSILEPYLDDLLTHLFVLLQSQKRYVQEQALSTIATIADSAEAAFSKYYVTLMPLLFQ 542
                 8********************************************************************************************9965 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.27
     MMS19_C   87 syydrivprlltlvvsaastsssiltddrllevlgriinlivrslssskqq 137 
                  ++++ i    l+ +v+a      +   ++ll+v+g  ++++ ++l++++qq
  KHJ32939.1 1043 YIAKAIEAETLQHSVAARI----ATVAKTLLQVAGLGVSQVLQQLPPETQQ 1089
                  2223333333333333333....5555566666666666666666666665 PP

>> RIX1  rRNA processing/ribosome biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       2.2   2.3e+03      11      70 ..       6      71 ..       2      90 .. 0.62
   2 ?    0.4   0.0      0.44   4.6e+02      61     169 ..     194     304 ..     172     319 .. 0.63
   3 ?    3.4   0.0     0.052        55      53     102 ..     377     426 ..     372     439 .. 0.90
   4 ?    3.5   0.0     0.049        51      54     108 ..     419     474 ..     408     479 .. 0.81
   5 !   19.4   0.1   6.6e-07    0.0007      17     112 ..     454     564 ..     445     575 .. 0.79
   6 ?   -3.4   0.0       6.5   6.9e+03      36      59 ..     744     763 ..     727     765 .. 0.67
   7 ?    2.9   0.0     0.075        79      45      89 ..     869     913 ..     829     917 .. 0.82
   8 ?   -3.2   0.0       5.6   5.9e+03     147     168 ..     969     994 ..     947    1004 .. 0.66

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.2
        RIX1 11 stppkelpsilstlashkllceellkselee.........lvhklvtrilsLlqskspegrwaGvcLak 70
                 + ++el ++l++++s+    +++  + l++         l   l+  + +   s++p++r +++++ +
  KHJ32939.1  6 PEAHNELTQLLDAIQSPDNSRRSIAEAHLTNnwtllkpemL---LIGLVEQIQGSNDPAKRSFAAVIFR 71
                55566777777777777777777766666666666554443...5555555556666666666666655 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.44
        RIX1  61 grwaGvcLakvtveesgeellssgstWlrallsiLekpdppavlelaistlsriftltrgkptltREiltpnlpkfitallqlleee...letvleals 156
                  r a++      +++  +   +++ ++++ +l+iL   +++   e + ++l  +++l+   p + R + +  l  f  +++q  e +    + +le+++
  KHJ32939.1 194 VRLAAMEAFASFFRSLNKKSKQKYYELISEVLNILPPIKEKQESEELSRALLSLIDLAEAAPKMFRPLFHN-LVVFSVSVIQDKELSdqaRQNALELMA 291
                 55555555555555555556666666777777777766666666667777777777777777777777766.666666666655544555666666666 PP

        RIX1 157 tllplhPttfRpf 169
                 t     P+ ++  
  KHJ32939.1 292 TFADFAPSMVKKD 304
                 6666666666555 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.052
        RIX1  53 LlqskspegrwaGvcLakvtveesgeellssgstWlrallsiLekpdppa 102
                 +++s+s ++r a++  + ++ e +++ ++ + s+ l  +++ L  p+p++
  KHJ32939.1 377 MMNSNSWRDRHAALMAISAISEGCRDLMIGELSQVLDLVIPALHHPHPRV 426
                 7899***************************************9997765 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.049
        RIX1  54 lqskspegrwaGvcLakvtveesgeellssg.stWlrallsiLekpdppavlelai 108
                 l+   p+ rw G++ ++ + +    ++ +++ s  l a++++L++p+p++  ++a 
  KHJ32939.1 419 LHHPHPRVRWSGCNALGQMSTDFAGTMQQKYhSVVLPAIIPVLNSPEPRVQAHAAA 474
                 6677899**************8887777766266789*********9987666554 PP

  == domain 5  score: 19.4 bits;  conditional E-value: 6.6e-07
        RIX1  17 lpsilstlashkllceellkselee............lvhklvtrilsLlqskspegrwaGvcLakvtveesgeellssgstWlrallsiLekpdp... 100
                 lp+i+++l+s+  + +++ ++ l +             ++ l t++  Llqs++ +    ++  + +++++    + +++ t++  l+++L+++++   
  KHJ32939.1 454 LPAIIPVLNSPEPRVQAHAAAALVNfceeaeksilepYLDDLLTHLFVLLQSQKRYVQEQALSTIATIADSAEAAFSKYYVTLMPLLFQVLQQENSvei 552
                 6667777777777766666666666777777777777*********************************************************65555 PP

        RIX1 101 pavlelaistls 112
                 +++ + a+++ +
  KHJ32939.1 553 RLLRAKAMECAT 564
                 555555555544 PP

  == domain 6  score: -3.4 bits;  conditional E-value: 6.5
        RIX1  36 kseleelvhklvtrilsLlqsksp 59 
                  +++      +++ i +Ll+s ++
  KHJ32939.1 744 IETQAL----WNATIEKLLESLNA 763
                 344555....99999999999776 PP

  == domain 7  score: 2.9 bits;  conditional E-value: 0.075
        RIX1  45 klvtrilsLlqskspegrwaGvcLakvtveesgeellssgstWlr 89 
                 +l+    ++l+s++p +r  G+c+   + e +gee +++++  ++
  KHJ32939.1 869 RLHGTYEQFLKSQDPTQRQWGICIMDDVLEFCGEESFKYSNYIIE 913
                 566666789******************999999999888876655 PP

  == domain 8  score: -3.2 bits;  conditional E-value: 5.6
        RIX1 147 e....letvlealstllplhPttfRp 168
                 e     e ++ a++++l+  P++++ 
  KHJ32939.1 969 EnvyaTENACAAIAKILHYQPSSVQD 994
                 14555667777777777777777655 PP

>> DUF3385  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.034        36      81     158 ..     173     249 ..     146     252 .. 0.81
   2 ?    0.7   0.0      0.42   4.4e+02      89     134 ..     372     420 ..     263     427 .. 0.79
   3 !    8.2   0.1    0.0021       2.2      71     156 ..     437     521 ..     423     524 .. 0.84
   4 ?    4.1   0.1     0.038        40       8      35 ..     533     560 ..     530     566 .. 0.89
   5 ?    4.9   0.0     0.021        22     113     141 ..     610     638 ..     582     645 .. 0.83
   6 ?   -0.6   0.1       1.1   1.1e+03      81     137 ..     970    1006 ..     953    1085 .. 0.65

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.034
     DUF3385  81 eyyptvvinaLlrilkdpslsshhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLatLvs 158
                    + +v++a  + +kd  ++  + a++ea  + f++l+ k+ +   ++i+++l+++   +e++ +e l ++L +L+ 
  KHJ32939.1 173 KQHEDTVLSAFTKGFKDDDVT-VRLAAMEAFASFFRSLNKKSKQKYYELISEVLNILPPIKEKQESEELSRALLSLID 249
                 555567788888888888876.778899****************99**********9999999999999999988876 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.42
     DUF3385  89 naLlrilkdpslsshhaa..vveaimnifktlglkc.vpfLdqiipall 134
                 + L r+++ +s ++ haa  +++ai   ++ l ++   ++Ld +ipal 
  KHJ32939.1 372 SWLPRMMNSNSWRDRHAAlmAISAISEGCRDLMIGElSQVLDLVIPALH 420
                 5577888888888777752268888888998888886789999999875 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0021
     DUF3385  71 lmvglspsneeyyptvvinaLlrilkdpslsshhaavveaimnifktlglkc.vpfLdqiipallsvirtteesnlrefllqqLatL 156
                 ++++   + ++ y +vv+ a++ +l+ p  +  +a++  a++n +++ + +   p+Ld ++ +l+ +++++++  ++e  l+ +at+
  KHJ32939.1 437 MSTDFAGTMQQKYHSVVLPAIIPVLNSPEPR-VQAHAAAALVNFCEEAEKSIlEPYLDDLLTHLFVLLQSQKR-YVQEQALSTIATI 521
                 555666666889**************99987.566677899*****999999899**************8877.9999999888887 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.038
     DUF3385   8 ypqLLelLlnilkteqsqsirrevikll 35 
                 y +L+ lL+++l++e+s +ir+  +k +
  KHJ32939.1 533 YVTLMPLLFQVLQQENSVEIRLLRAKAM 560
                 899*****************98777766 PP

  == domain 5  score: 4.9 bits;  conditional E-value: 0.021
     DUF3385 113 nifktlglkcvpfLdqiipallsvirtte 141
                  +++ +g   vpfL++++p ll + +  +
  KHJ32939.1 610 RMCRVMGQDFVPFLSNVMPPLLDLASAKA 638
                 578999****************9887655 PP

  == domain 6  score: -0.6 bits;  conditional E-value: 1.1
     DUF3385   81 eyypt.vvinaLlrilkdpslsshhaavveaimnifktlglkcvpfLdqiipallsvi 137 
                  ++y+t  + +a+++il                    +  + ++v+  +qii + + ++
  KHJ32939.1  970 NVYATeNACAAIAKIL--------------------H-YQPSSVQDQQQIITQWIDTL 1006
                  4555445555555555....................3.23333444444444444433 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.1   6.1e-05     0.064      13      40 ..     453     480 ..     451     481 .. 0.95
   2 !    6.3   0.0    0.0099        10      20      40 ..     502     522 ..     495     523 .. 0.88
   3 ?    1.4   0.1      0.34   3.6e+02      11      24 ..     624     638 ..     624     644 .. 0.78
   4 ?   -2.2   0.1       4.6   4.8e+03      29      37 ..     974     982 ..     968     985 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 6.1e-05
                 HHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm  13 avppLvrLLssedeevqeeAawALsNLa 40 
                 ++p+ +  L+s+ ++vq  Aa+AL N +
  KHJ32939.1 453 VLPAIIPVLNSPEPRVQAHAAAALVNFC 480
                 69************************88 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0099
                 HTTTSSHHHHHHHHHHHHHHT CS
         Arm  20 LLssedeevqeeAawALsNLa 40 
                 LL+s++  vqe+A+++++ +a
  KHJ32939.1 502 LLQSQKRYVQEQALSTIATIA 522
                 9***************99877 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.34
                 TTHHHHHHHHTT.TS CS
         Arm  11 aGavppLvrLLs.se 24 
                 ++++ppL++L s   
  KHJ32939.1 624 SNVMPPLLDLASaKA 638
                 699*******98444 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 4.6
                 HHHHHHHHH CS
         Arm  29 qeeAawALs 37 
                 +e+A++A++
  KHJ32939.1 974 TENACAAIA 982
                 79*****97 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.39   4.1e+02      61     109 ..      86     131 ..      83     133 .. 0.78
   2 ?    1.9   0.0      0.23   2.5e+02      34      75 ..     172     213 ..     148     261 .. 0.70
   3 ?   -2.6   0.0       5.7     6e+03      29      69 ..     281     321 ..     270     323 .. 0.75
   4 ?   -2.0   0.0       3.8     4e+03      19      69 ..     389     439 ..     378     448 .. 0.66
   5 !   12.5   0.4   0.00012      0.13       7      96 ..     460     554 ..     454     564 .. 0.79
   6 ?   -2.0   0.0       3.8     4e+03      15      50 ..     720     762 ..     718     787 .. 0.56
   7 ?   -2.5   0.1       5.4   5.7e+03      63      93 ..    1021    1058 ..     979    1072 .. 0.59

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.39
     RTP1_C1  61 ikgLvaLadvfpeevlklLleeyeeenekeslderlkvGEaLlrvirrl 109
                 ++++ +L +   + + ++Lle+    ++++++ +r k+G+a+ +v+r+ 
  KHJ32939.1  86 VETFISLPTEQGHIIRQKLLEAL---SSETETSTRNKIGDAVAEVARQY 131
                 66666777777777778888888...77888999********9999875 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.23
     RTP1_C1  34 avldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeev 75 
                 ++++ +++l+ + +  kd+d  v L+a++++++     +++ 
  KHJ32939.1 172 EKQHEDTVLSAFTKGFKDDDVTVRLAAMEAFASFFRSLNKKS 213
                 567788888899999999998888888888887766655543 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 5.7
     RTP1_C1  29 kkskeavldiekilkllleaLkdedsYvYLnaikgLvaLad 69 
                 + +++a++   + ++   +++k++ +Yv  +  ++L+ ++d
  KHJ32939.1 281 QARQNALELMATFADFAPSMVKKDPTYVNDMITQCLSFMTD 321
                 44455677777778888889999999999888888888876 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 3.8
     RTP1_C1  19 glvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLad 69 
                 +l+ ++ + e  +   + +++++l+l++ aL+++ + v  +  ++L ++ +
  KHJ32939.1 389 ALMAISAISEGCRDLMIGELSQVLDLVIPALHHPHPRVRWSGCNALGQMST 439
                 555555555555555667777788888888887777666666666666665 PP

  == domain 5  score: 12.5 bits;  conditional E-value: 0.00012
     RTP1_C1   7 dlqdpllpvrahglvlLrkliekkske.avldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeevlklLleey....eeenekeslderl 96 
                  l++p++ v+ah+   L + +e+ +k+  +  ++ +l+ l+  L+ +  Yv  +a ++++++ad  ++ + k  +       +  ++++s++ rl
  KHJ32939.1 460 VLNSPEPRVQAHAAAALVNFCEEAEKSiLEPYLDDLLTHLFVLLQSQKRYVQEQALSTIATIADSAEAAFSKYYVTLMpllfQVLQQENSVEIRL 554
                 699********************9977444567889999999**********************9887766655544444445556666666665 PP

  == domain 6  score: -2.0 bits;  conditional E-value: 3.8
     RTP1_C1  15 vrahglvlLrkliekkske.......avldiekilkllleaLk 50 
                 vra    l  +l+++ +k+       +++ ++++++ lle+L+
  KHJ32939.1 720 VRAVSAKLVPQLLSSYKKHfghpsieTQALWNATIEKLLESLN 762
                 5555555555555555555555444444444555555555544 PP

  == domain 7  score: -2.5 bits;  conditional E-value: 5.4
     RTP1_C1   63 gLvaLadvfpeevlklLleey.......eeenekesld 93  
                   L++L+d ++  v+++  + +       e e+ ++s+ 
  KHJ32939.1 1021 YLAELIDQHNIAVISQAGKIFlyiakaiEAETLQHSVA 1058
                  56777777777777766666655655554444444444 PP

>> MMS19_N  Dos2-interacting transcription regulator of RNA-Pol-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.2   2.3e+03       4      36 ..     104     137 ..      99     159 .. 0.72
   2 !    9.7   0.3   0.00055      0.58       8     128 ..     187     311 ..     181     321 .. 0.77
   3 ?    4.2   0.1     0.025        27     202     255 ..     446     499 ..     440     536 .. 0.95
   4 ?   -0.4   0.0      0.66     7e+02      14      48 ..     768     802 ..     727     811 .. 0.55
   5 ?   -2.5   0.0       2.8     3e+03       5      30 ..     875     900 ..     874     909 .. 0.85
   6 ?    0.1   0.1      0.45   4.8e+02      18      92 ..     976    1051 ..     953    1094 .. 0.52

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.2
     MMS19_N   4 LgeyLts.eddkvRakavslLaevlsrlpkkkls 36 
                 L e+L s +++++R+k     aev+++++++kl+
  KHJ32939.1 104 LLEALSSeTETSTRNKIGDAVAEVARQYSDDKLQ 137
                 4455655467777888888888888777766665 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00055
     MMS19_N   8 LtseddkvRakavslLaevlsrlpkkklseeevevLvqFf..lsrledfavlkealkgllaLlrlkkfsaeeavevlralf....eevhvqslaqadRk 100
                 + ++d +vR  a++ +a+++++l+k k +++  e++++ +  l  +++++  +e+ ++ll+L++l ++++++   ++++l+    + ++ ++l+ + R+
  KHJ32939.1 187 FKDDDVTVRLAAMEAFASFFRSLNK-KSKQKYYELISEVLniLPPIKEKQESEELSRALLSLIDLAEAAPKMFRPLFHNLVvfsvSVIQDKELSDQARQ 284
                 5678999****************98.789999999998852267899******************9998888777666655554466677789****** PP

     MMS19_N 101 lvyelldallekhrealkelgedflegf 128
                 +++el+ ++ +   + +k    ++++ +
  KHJ32939.1 285 NALELMATFADFAPSMVK-KDPTYVNDM 311
                 ******999865444444.333333333 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.025
     MMS19_N 202 splfaplalplllekLdstsvsakldaLqtlaacveaygaeavaehlralwsal 255
                 ++++   +lp+++  L+s  ++++  a ++l++ +e+ +++ ++++l++l+++l
  KHJ32939.1 446 QQKYHSVVLPAIIPVLNSPEPRVQAHAAAALVNFCEEAEKSILEPYLDDLLTHL 499
                 6789999****************************************9999887 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 0.66
     MMS19_N  14 kvRakavslLaevlsrlpkkklseeevevLvqFfl 48 
                 ++ a+ ++++ e ++ + k+ ls++++e++++  +
  KHJ32939.1 768 DTLAEMYQCFYESVEVMGKNCLSQQNMETFINSAT 802
                 23333444444444444444445554444444444 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 2.8
     MMS19_N   5 geyLtseddkvRakavslLaevlsrl 30 
                 +++L s+d ++R+ ++ ++ +vl+ +
  KHJ32939.1 875 EQFLKSQDPTQRQWGICIMDDVLEFC 900
                 6799******************9866 PP

  == domain 6  score: 0.1 bits;  conditional E-value: 0.45
     MMS19_N   18 kavslLaevlsrlpkkklseeevevLvqFflsrle...dfavlkealkgllaLlrlkkfsaee.avevlralfeevhvq 92  
                  +a+  +a++l+  p+ +  + + ++++q++ + l    d+++ + a + l++L++ ++++  + a +++  + ++++ +
  KHJ32939.1  976 NACAAIAKILHYQPS-S-VQDQQQIITQWIDT-LPvinDEEAAPYAYAYLAELIDQHNIAVISqAGKIFLYIAKAIEAE 1051
                  333344444443332.1.11222233333221.1112255555555555555555555444433444444444444444 PP

>> V-ATPase_H_N  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.2     0.044        47      98     188 ..     172     264 ..     160     321 .. 0.72
   2 !   11.5   0.3   0.00013      0.14      99     210 ..     443     551 ..     432     642 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.044
  V-ATPase_H_N  98 akkeeqdpwkpflkllnrqddfivllalrllakllvqgkkksnklvesaLnrllqlLssqlssstnevieiavrllqellrt..keyRelfve 188
                   +k+ e+++++ f k  + +d  + l a+  +a++++  +kks++   +++  +l++L    +++++e  + a+ +l  l+    k +R lf +
    KHJ32939.1 172 EKQHEDTVLSAFTKGFKDDDVTVRLAAMEAFASFFRSLNKKSKQKYYELISEVLNILPPIKEKQESEELSRALLSLIDLAEAapKMFRPLFHN 264
                   566677799999998888999999999999999999999999998888888888888775555555444555555555544322455555554 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00013
  V-ATPase_H_N  99 kkeeqd...pwkpflk.llnrqddfivllalrllakllvqgkkksnklvesaLnrllqlLssqlssstnevieiavrllqellrtkeyRelfveadg 191
                   +  +q+   ++ p +  +ln+++  ++ +a+  l+++  +++k+  +     L++ll++L  +l+s+++ v+e a+  +++++ + e  +    + +
    KHJ32939.1 443 GTMQQKyhsVVLPAIIpVLNSPEPRVQAHAAAALVNFCEEAEKSILE---PYLDDLLTHLFVLLQSQKRYVQEQALSTIATIADSAEAAFSKYYVTL 536
                   44444444566666655999999999999999999998888888888...99999999999999999995555555555555555555444444999 PP

  V-ATPase_H_N 192 vstlisilrstvanstrvg 210
                   +++l+++l+    ++++v 
    KHJ32939.1 537 MPLLFQVLQ----QENSVE 551
                   999999994....333333 PP

>> Cnd3  Nuclear condensing complex subunits, C-term domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.28     3e+02     115     145 ..     174     203 ..     111     248 .. 0.84
   2 ?    8.9   0.0   0.00071      0.74      27      88 ..     412     477 ..     405     482 .. 0.70
   3 ?   -0.3   0.0      0.45   4.7e+02      29      84 ..     497     555 ..     484     562 .. 0.73

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.28
                 ....HHHHHHHHHHC-TT-HHHHHHHHHHHH CS
        Cnd3 115 essksllkllykaLdsednpelqaiaaeglc 145
                 +++ ++l+ ++k ++++ +  ++ +a e+++
  KHJ32939.1 174 QHEDTVLSAFTKGFKDD-DVTVRLAAMEAFA 203
                 566799999*****876.6999999999998 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00071
                 HHHTHHHHHC-SSHHHHHHHHHHHHHHHTT-H.HHHHHHHHHHHHHHH...HS.-HHHHHHHHHHHH CS
        Cnd3  27 leslilpavrskeaairelglkcLglfclldk.klakenlklflqals...kg.neelkiialkaif 88 
                 l +l++pa+++ ++ +r  g  +Lg ++     ++ +++ +++l a+    ++ ++++++ a+ a++
  KHJ32939.1 412 L-DLVIPALHHPHPRVRWSGCNALGQMSTDFAgTMQQKYHSVVLPAIIpvlNSpEPRVQAHAAAALV 477
                 4.8**********************998744324444444555544445554447777777777776 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.45
                 HTHHHHHC-SSHHHHHHHHHHHHHHHTT-H....HHHHHHHHHHHHHHHHS-HHHHHHHH CS
        Cnd3  29 slilpavrskeaairelglkcLglfclldk....klakenlklflqalskgneelkiial 84 
                 +++   ++s+++ ++e++l + ++ +   +    k+  + ++l++q+l+++ ++++i  l
  KHJ32939.1 497 THLFVLLQSQKRYVQEQALSTIATIADSAEaafsKYYVTLMPLLFQVLQQE-NSVEIRLL 555
                 555667889999999999999999988888888888888999999999964.44444443 PP

>> Telomere_reg-2  Telomere length regulation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.1      0.52   5.4e+02       6      46 ..     223     266 ..     179     302 .. 0.49
   2 ?   10.9   0.9   0.00045      0.48       3      68 ..     491     562 ..     490     595 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.52
  Telomere_reg-2   6 dllelLr...dkddyekieaaLksaeeLirrkadeveenaveLa 46 
                     ++l+ L    +k++ e + +aL s+  L +++++ ++ +  +L+
      KHJ32939.1 223 EVLNILPpikEKQESEELSRALLSLIDLAEAAPKMFRPLFHNLV 266
                     22222223323333444444444444444444444333333333 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00045
  Telomere_reg-2   3 YlkdllelLr...dkddyekieaaLksaeeLirrkadeveenaveLataLltl...edkfdienfeelrlna 68 
                     Yl dll+ L+   +++++  +e+aL++++++  +++++++++ v L+  L ++   e++++i     + +++
      KHJ32939.1 491 YLDDLLTHLFvllQSQKRYVQEQALSTIATIADSAEAAFSKYYVTLMPLLFQVlqqENSVEIRLLRAKAMEC 562
                     9********9999999999****************************9999985444444555544444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1096 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       805  (0.0448993); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.86u 0.32s 00:00:01.18 Elapsed: 00:00:00.47
# Mc/sec: 6951.63
//
Query:       KHJ32940.1  [L=484]
Description: putative mitosis protein dim1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.7e-68  226.2   1.1    1.3e-67  225.6   0.2    1.8  2  DIM1         Mitosis protein DIM1
      8e-52  176.3   0.9    1.3e-51  175.6   0.9    1.3  1  RVT_2        Reverse transcriptase (RNA-dependent DNA polymer
  ------ inclusion threshold ------
      0.095   12.4   0.0       0.19   11.4   0.0    1.5  1  Crr6         Chlororespiratory reduction 6
       0.12   12.4   0.0       0.26   11.3   0.0    1.6  1  Thioredoxin  Thioredoxin
       0.17   11.9   0.0       0.42   10.6   0.0    1.7  1  DUF3192      Protein of unknown function (DUF3192)


Domain annotation for each model (and alignments):
>> DIM1  Mitosis protein DIM1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  225.6   0.2   3.7e-71   1.3e-67       1     133 []       5     137 ..       5     137 .. 0.99
   2 ?   -3.4   0.0       2.2   7.8e+03      34      60 ..     212     239 ..     207     244 .. 0.66

  Alignments for each domain:
  == domain 1  score: 225.6 bits;  conditional E-value: 3.7e-71
                 TS-EE-SHHHHHHHHHH-SSSEEEEEEE-TT-HHHHHHHHHHHHHHHHTTTTEEEEEEETTT--TTSCCCTT-SSSEEEEEETTEEEEEE-SSS--SSB CS
        DIM1   1 llpkLetkeevdqailseeerlvviRFGrdedaeClklDelLakiaeklknfaviylvdidevpdfnkmyeledpvtilffyrnkhmkvDfgtgdnnKl 99 
                 +lp+L+t+++vdqai+seeerlvviRFGrd d++C+++De+L+kiae +knfav+y++d+devpdf++myel+dp+ti+ffyrnkhm++Dfgtg+nnKl
  KHJ32940.1   5 VLPHLRTGWHVDQAIMSEEERLVVIRFGRDYDPDCMRQDEVLYKIAEVVKNFAVLYVCDLDEVPDFKQMYELYDPMTIMFFYRNKHMMCDFGTGNNNKL 103
                 59************************************************************************************************* PP

                 -S----HHHHHHHHHHHHHHHHHT-SEEE-SS-T CS
        DIM1 100 nfvledkqelidiietiyrgakkgkglvvspidy 133
                 n+vledkqelidi+e+iy+gakkg+glv+sp+dy
  KHJ32940.1 104 NWVLEDKQELIDILEVIYKGAKKGRGLVISPKDY 137
                 ********************************97 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.2
                 HHHHHHHHHHHHHHHTTTT.EEEEEEET CS
        DIM1  34 eClklDelLakiaeklknf.aviylvdi 60 
                 +C   De  a i +k+k +   +++ d+
  KHJ32940.1 212 NCPDKDEWKAAIISKIKLYfFYMFVFDV 239
                 6888888888888888754134555555 PP

>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.6   0.9   3.6e-55   1.3e-51      19     241 ..     235     456 ..     230     457 .. 0.96

  Alignments for each domain:
  == domain 1  score: 175.6 bits;  conditional E-value: 3.6e-55
       RVT_2  19 Wvftkkkddl.kevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaaeeelvvhqldvdsafLnaeldeevyvkqPpGfeidreeekvykLn 116
                 +vf  kk++  ++ kyka  va+Gfsqk g++y+e faP ir+++ rL+l+ aa++ + ++q+d  +afL ++l+++ y++ P         +k +++ 
  KHJ32940.1 235 FVFDVKKNEDgEVIKYKAFSVARGFSQKYGINYEEKFAPTIRYNAQRLFLSTAAKNVWKIYQMDTVTAFLAGTLNDKDYLQMPQYLWST--FGKYVRIL 331
                 79999998876899*******************************************************************99987766..89999*** PP

       RVT_2 117 kslyGlkqapllWnekidkvLkklgferseaesGlyvrgtgegklivalyvddlliagsdikiledvkkelakkfklkdlgkvskfLGieiaqeaggik 215
                 kslyGlkqa+ +W++ + ++L + gf++ ++   +++     +++ ++++vddlliag++ +++  +k++l++ f++kdlg++ + LGi i ++ + + 
  KHJ32940.1 332 KSLYGLKQAAAVWYNLLRSFLVENGFHPLPTDPSIFINRSNTAQVSIGVFVDDLLIAGGNENEIFAIKEKLKALFEMKDLGEARNVLGIRIRRNRNLLA 430
                 ***************************************999********************************************************* PP

       RVT_2 216 lsladyiakvvkkfeltdaktvatPl 241
                 + + +y+ ++v +f   +a +   P+
  KHJ32940.1 431 IDQSKYALEIVIEFLAKNAAAYDKPM 456
                 *************9999988888887 PP

>> Crr6  Chlororespiratory reduction 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   5.2e-05      0.19      72     104 ..     238     270 ..     210     304 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.2e-05
        Crr6  72 llldwkaGelaryaamlvpHqfsrkeGiqfnpe 104
                  + + ++Ge+++y a  v   fs+k Gi+++ +
  KHJ32940.1 238 DVKKNEDGEVIKYKAFSVARGFSQKYGINYEEK 270
                 3334568***********************865 PP

>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   7.3e-05      0.26      14      86 ..      20      92 ..      11     109 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 7.3e-05
                 HTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEE CS
  Thioredoxin 14 vakekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevk 86
                 +++e++lv++ F  ++ + C +   +l k+ae +k+  +l+ +d de +d  + ye     t+++f  +k++ 
   KHJ32940.1 20 MSEEERLVVIRFGRDYDPDCMRQDEVLYKIAEVVKNFAVLYVCDLDEVPDFKQMYELYDPMTIMFFYRNKHMM 92
                 4458999****************************9999999***************9999999988887443 PP

>> DUF3192  Protein of unknown function (DUF3192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00012      0.42      20      89 ..      41     110 ..      27     122 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00012
     DUF3192  20 rqakNrkklaklslglskeqvlellGsaDfseakkkkdkevqvlfYRTqrkksDgkTTkdEcTpllfknn 89 
                 rq++   k+a++  ++++  v +l   +Df+++++  d    ++fYR +++  D  T ++     +++++
  KHJ32940.1  41 RQDEVLYKIAEVVKNFAVLYVCDLDEVPDFKQMYELYDPMTIMFFYRNKHMMCDFGTGNNNKLNWVLEDK 110
                 555666788888888889999999999***************************9998888777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.21s 00:00:00.74 Elapsed: 00:00:00.37
# Mc/sec: 3894.09
//
Query:       KHJ32941.1  [L=591]
Description: hypothetical protein EV44_g3830 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-27   95.4   0.0    5.4e-27   94.8   0.0    1.2  1  RVT_1            Reverse transcriptase (RNA-dependent DNA pol
    6.2e-14   51.9   1.0    1.4e-13   50.7   1.0    1.6  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase
      0.003   17.1   0.6       0.01   15.3   0.7    1.8  2  Exo_endo_phos    Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.8   0.0     9e-31   5.4e-27       7     210 ..     339     550 ..     327     578 .. 0.90

  Alignments for each domain:
  == domain 1  score: 94.8 bits;  conditional E-value: 9e-31
                 S-EEE......-THHHHCTB--...........-------HHHH.................HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET. CS
       RVT_1   7 gsyRpisllsvdykalnkliakrLkdvl..ekllsenqpgfrpgrstldav....edllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvpt 99 
                 + yRp++lls+++k l++l+a+r++ ++   ++l +nq+g  ++rs ++       d+ ka    +k   ++++D+k+aFd v  ++ll++l + + p+
  KHJ32941.1 339 SYYRPVALLSCLGKGLERLLAHRMSYCAskYEILTQNQCGAIRQRSAVELKtvpiCDISKA-LLDRKVARIVTVDVKGAFDCVLYNRLLHRLRTQGWPE 436
                 67**************************9999***************98668896444444.577888999**************************** PP

                 ........................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHH......HHHHHHHHHHHHH CS
       RVT_1 100 klinliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskee......lqelleaveewlk 192
                 +l++ +ksf+++rs+++ ++ ++ +++++ +  pqGs++SP+lf l+++++lr  r r        YaDD  +l++ ++       l++  + + +w  
  KHJ32941.1 437 TLVKRVKSFFQERSAHIILDLTTLEPFPILCDSPQGSPISPILFLLYVEPFLRLSRGR------FGYADDGCLLATARTLedceckLESKFNQTLQWGY 529
                 **********************99*********************************8......7*****99998887666799*************** PP

                 HTT--BEGGG-EEE....... CS
       RVT_1 193 esglkinpeKtklvlft...v 210
                 e+g+ +  +K +l +f+   +
  KHJ32941.1 530 ENGVIFDSAKMELQYFHnkrK 550
                 *************99884430 PP

>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   1.0   2.4e-17   1.4e-13      13     116 ..      79     176 ..      67     179 .. 0.84

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 2.4e-17
  Exo_endo_phos_2  13 elenlestlekllselkspkiiilGDfNakhplWgsedtdssargeeLiefleehslsllnllksg.ptfkssngsstiDltltsdnlalskle 105
                      ++ n+ s l++ll++  + ++ ++GDfN+ hp+W+s++ + s ++ +L++++ e++lslln ++++  ++       t+Dl + ++  a   ++
       KHJ32941.1  79 NCINAGSGLQTLLNSSET-HYFVGGDFNLNHPSWDSSSVHASPHAMDLLQWVSEKNLSLLNSTETPpHRY-----GGTLDLAFCTQVGATC-TI 165
                      4678889999****9996.9****************66666*****************999988663344.....579**********999.88 PP

  Exo_endo_phos_2 106 leeedlgSDHr 116
                       ++ +++SDH 
       KHJ32941.1 166 RSDLHTTSDHE 176
                      88899*****7 PP

>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.7   1.7e-06      0.01     142     233 .]      93     175 ..      81     175 .. 0.77
   2 ?   -2.6   0.0      0.53   3.2e+03      64      85 ..     470     512 ..     421     525 .. 0.65

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.7e-06
                    HTTSEEEEEEE-SSSTSGGGBSCGHHHHHHCTTTHH.SSCESCETTTTTTTTTTTEB-BEEEEEECHHHCCEEEEEEECCHHEEC....TSSCSSS CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxx RF
  Exo_endo_phos 142 drgapvivaGDfNarpsdddsrvlrtrglalapapv.glyllgggptptyvtraggsrlDrilaspalalfrsgvlppplalvrr....ealtlSD 232
                     +  +++v GDfN  + ++ds +  + + a +   +    +l   + + ++++ +g++lD ++ +         v+        +    + +t+SD
     KHJ32941.1  93 SSETHYFVGGDFNLNHPSWDSSSVHASPHAMDLLQWvSEKNLSLLNSTETPPHRYGGTLDLAFCTQ--------VGAT------CtirsDLHTTSD 174
                    556789*****************5555554444444999999999999999999*********995........3333......234445788899 PP

                    B CS
                    x RF
  Exo_endo_phos 233 H 233
                    H
     KHJ32941.1 175 H 175
                    9 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.53
                    H.....................ECSSSTTSSEEEEEECSTEEE CS
                    x.....................xxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  64 p.....................tgggggggnggavlsrfplts 85 
                    p                     +g+ g+ ++g+ ++  ++l  
     KHJ32941.1 470 PqgspispilfllyvepflrlsRGRFGYADDGCLLATARTLED 512
                    2344555566666666667777888888888888887777754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       344  (0.0191868); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 4152.45
//
Query:       KHJ32942.1  [L=435]
Description: hypothetical protein EV44_g3966 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.052   12.8   0.0       0.25   10.6   0.0    1.8  2  DUF2130   Uncharacterized protein conserved in bacteria (DUF2


Domain annotation for each model (and alignments):
>> DUF2130  Uncharacterized protein conserved in bacteria (DUF2130)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   1.4e-05      0.25     154     237 ..      33     121 ..      26     136 .. 0.83
   2 ?   -0.5   0.0     0.033   5.9e+02     106     128 ..     147     169 ..     142     182 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 1.4e-05
     DUF2130 154 iplitiLrqaliksleakkelenvkekneditefetkkeefkekfrknieaavekfqkaieeidke........lekikekl..eksinkllla 237
                  pl+++L +++ k+ ++ ++ + v++ ++  t+fe+     ++  ++ni+a++e   k+  e+d+         l+++ e+l   +si ++ ++
  KHJ32942.1  33 QPLAAVLTRSAAKTNAVVEKIAAVQDTHAVATQFEQ-----SPTLAMNIDAKSESELKSEPEVDDFpllpfaplLKRTFESLilLDSIYNIANN 121
                 699*********************************.....**************999999999887777777666666664224555555555 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.033
     DUF2130 106 flkkLdkDrrkkkaeyAvLVsel 128
                 +l++++ D  +++a y vL+se 
  KHJ32942.1 147 YLEEMEIDCPEAGAGYLVLISEG 169
                 7999*****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       357  (0.0199119); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 3228.35
//
Query:       KHJ32943.1  [L=332]
Description: putative malate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.7e-49  165.5   0.0    1.4e-48  165.0   0.0    1.2  1  Ldh_1_C        lactate/malate dehydrogenase, alpha/beta C-ter
    1.9e-39  135.0   0.2    2.7e-39  134.5   0.2    1.2  1  Ldh_1_N        lactate/malate dehydrogenase, NAD binding doma
  ------ inclusion threshold ------
      0.032   13.8   0.1        3.7    7.1   0.2    2.2  2  Glyco_hydro_4  Family 4 glycosyl hydrolase


Domain annotation for each model (and alignments):
>> Ldh_1_C  lactate/malate dehydrogenase, alpha/beta C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.0   0.0   2.3e-52   1.4e-48       1     167 []     150     326 ..     150     326 .. 0.96

  Alignments for each domain:
  == domain 1  score: 165.0 bits;  conditional E-value: 2.3e-52
                 THHHHHHHHHHHHHHHTS.-GGGEE--EEBSSSTETTEEHHHHHTTSTTSTHHHHHHHHHHHHHHHHHHHHHHTTSSSS-HHHHHHHHHHHHHHHTTHT CS
     Ldh_1_C   1 TtLDivRaktflaekagv.tprsvkvtViGgHsgvtiipllsqvkellklsekqleeliervqnggdevvkakkGagsatlsmAvAgakfveallrdtk 98 
                 TtLD+vRa+tf+ae  +  +p++vkv+V+GgHsg+ti+pl+sq++ + +ls ++l++l++rvq+ggdevv+ak+G gsatlsmA+Ag++f+ea+l++++
  KHJ32943.1 150 TTLDVVRAETFVAEIINEkNPQKVKVPVVGGHSGETIVPLFSQSNPSFSLSADKLKALVHRVQFGGDEVVEAKQGTGSATLSMAYAGYRFTEAVLKALN 248
                 9*************66655*******************************************************************************9 PP

                 EEEEEEEEEESCCCECCS..........SEEEEEEEEEEETTEEEEE-----.--HHHHHHHHHHHHHHHHHHHHHHCCH CS
     Ldh_1_C  99 eilsagvyldgevglkdq..........eieyfsvPvvlgknGvekvleilk.lndfeeekleksvkeLkkeiekglefv 167
                 ++  +g++++++v l+            +i yfsvPv lg +Gvek+++ l+ l++ e+  l ++ + Lk +i kg+efv
  KHJ32943.1 249 GE--KGIIEPSYVYLDGLpggdpimkklGISYFSVPVELGIHGVEKLYDPLNnLTETEQTLLTAATAGLKLNISKGIEFV 326
                 99..99**9999988888888999*************************9999************************996 PP

>> Ldh_1_N  lactate/malate dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.5   0.2   4.5e-43   2.7e-39       2     141 .]       4     148 ..       3     148 .. 0.97

  Alignments for each domain:
  == domain 1  score: 134.5 bits;  conditional E-value: 4.5e-43
                 EEEEETTTSHHHHHHHHHHHHTTSSSEEEEE-SSHHHHHHHHHHHHHCHCCSTS-EEEEE..SSGGGGTTESEEEE--S.-SS-TTTTHHHHHHHHHHH CS
     Ldh_1_N   2 kvavvGaaGgiGqslalllankkladelaLlDiakekleGvaldlshistflsvkvkvse..keeealkdadvvvitag.vprkpGetRddLlkvNakI 97 
                 k +v GaaGgiGq+l+lll+ ++l +elaL+D++  +++Gva+dlshis +++v+++ ++  + +ea+k+ad+vvi+ag    kpG++RddL+++Na+I
  KHJ32943.1   4 KAVVAGAAGGIGQPLSLLLKLSPLISELALYDVV--NTPGVATDLSHISSPATVSGHLPQdgGATEAFKNADIVVIPAGgLVGKPGMSRDDLFNINAGI 100
                 7799******************************..9*********************998899************9863789**************** PP

                 HHHHHHHHHHHTTTSEEEE-SSSHH....HHHHHHHHHHTS-GGGEEE CS
     Ldh_1_N  98 vkeiveaiakvapnaivlvvsNPvd....iltevlkkasglpkkrvig 141
                 vk +ve ia+vap+a +l++sNPv+    i++evlk +  ++ +r++g
  KHJ32943.1 101 VKGLVEIIADVAPKAYILIISNPVNstvpIAAEVLKSKNVFNANRLFG 148
                 *********************************************998 PP

>> Glyco_hydro_4  Family 4 glycosyl hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0    0.0046        27      28      80 ..      28      78 ..       6      93 .. 0.80
   2 ?    7.1   0.2   0.00062       3.7     127     164 ..     104     140 ..      93     155 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0046
                   EEEEEEE-SSHHHHHHHHHHHHHHHHHCTTTCEEEEESSHHHHHTT-SEEEE- CS
  Glyco_hydro_4 28 vselaLvDideerldaiqtlakklveeagadlkieattdrkealkdadfVita 80
                   +selaL+D+ +     ++t ++++   a ++ ++ +     ea+k+ad+V++ 
     KHJ32943.1 28 ISELALYDVVN--TPGVATDLSHISSPATVSGHLPQDGGATEAFKNADIVVIP 78
                   56899999988..677888888999999999999999999**********975 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.00062
                    HHHHHHHH-TTSEEEE-SSSHHHHHHHHHHHSTTSEEE CS
  Glyco_hydro_4 127 IakdieelcPdawvlnytNPaavvteallrlvpnikav 164
                    +++ i +++P+a++l  +NP+  +  +   +   +k v
     KHJ32943.1 104 LVEIIADVAPKAYILIISNPVNSTVPIAAEVLK-SKNV 140
                    45668899************9876555544433.5544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2572.00
//
Query:       KHJ32944.1  [L=125]
Description: putative bet3 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-05   22.1   0.0    0.00013   21.7   0.0    1.2  1  TRAPP     Transport protein particle (TRAPP) component


Domain annotation for each model (and alignments):
>> TRAPP  Transport protein particle (TRAPP) component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   7.3e-09   0.00013       2      40 ..      26     123 ..      25     125 .] 0.95

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 7.3e-09
       TRAPP   2 afllgelvsylqrdskdveeve...........................................................krLekmGyrvGlrllel 40 
                 ++l++elv++++r  +++++                                                              rLe++GyrvG++l+e 
  KHJ32944.1  26 DLLMIELVPLAYRLANEIDATAtttmntelegraikrqnihggegnlgidgnlgvsrvkanstiiaeskkmeedeerdavfFRLEALGYRVGQGLVES 123
                 799***********99999999999***********************************************************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 913.85
//
Query:       KHJ32945.1  [L=108]
Description: hypothetical protein EV44_g0425 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.18   11.7   0.0       0.24   11.3   0.0    1.1  1  Post_transc_reg  Post-transcriptional regulator


Domain annotation for each model (and alignments):
>> Post_transc_reg  Post-transcriptional regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.3e-05      0.24      10      35 ..      12      37 ..       7      42 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.3e-05
  Post_transc_reg 10 palksKveEfkllgYdriteediwny 35
                      a+ sK++E+++  +++it+++++n 
       KHJ32945.1 12 LAIFSKAHEINQATHQTITARQVRNI 37
                     689********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 802.92
//
Query:       KHJ32946.1  [L=179]
Description: hypothetical protein EV44_g3511 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1342.80
//
Query:       KHJ32947.1  [L=984]
Description: putative dna mismatch repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.5e-14   52.8   0.0    8.5e-14   51.6   0.0    1.7  1  HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like
    1.3e-09   37.9   0.0    1.8e-08   34.3   0.0    2.4  1  MutL_C       MutL C terminal dimerisation domain
    0.00035   21.0   0.0    0.00099   19.6   0.0    1.8  1  HATPase_c    Histidine kinase-, DNA gyrase B-, and HSP90-like
  ------ inclusion threshold ------
       0.17   11.6   2.1          9    6.0   0.0    3.5  3  3-PAP        Myotubularin-associated protein


Domain annotation for each model (and alignments):
>> HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   0.0   1.9e-17   8.5e-14       4     108 ..      24     125 ..      20     146 .. 0.86

  Alignments for each domain:
  == domain 1  score: 51.6 bits;  conditional E-value: 1.9e-17
  HATPase_c_3   4 ekAlaelvdNsldAdaenvkievnknrgktgeivieDdGkGmseeelknalrlatsskeakr..kstslGkkGiGlklAslslgkkltvitkkegess 99 
                  +++++ l +NsldA++++++i+v+  r   g +v+eD+G G+ ++e+++   l+++ +++k+  ++ ++G++G    lAs+s  + lt+++++   +s
   KHJ32947.1  24 NDVVLALFKNSLDASCTKIEITVDYSR---GLCVVEDNGVGILPSEFRESGGLGKPYHTSKQyeTEVVHGRRGNS--LASISAIAFLTITSHHFLYQS 116
                  789999*******************98...6******************8888888877765337778*****99..****************99999 PP

  HATPase_c_3 100 tltldvdki 108
                  ++tl ++ +
   KHJ32947.1 117 HNTLCINNS 125
                  999888754 PP

>> MutL_C  MutL C terminal dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.3   0.0   4.1e-12   1.8e-08      15      99 ..     734     839 ..     711     911 .. 0.80

  Alignments for each domain:
  == domain 1  score: 34.3 bits;  conditional E-value: 4.1e-12
                 EEEETTE.EEEEEHHHHHHHHHHHHHHHHCCHSS..........B-EEEEEEEEEEE--HHHHHHHHHCHHHHHHCT-EEEE..........-STTEEE CS
      MutL_C  15 laenedg.lvlvDqhaAherilyeklkeqlkeee..........lksQpLliPlvlelspeeaalleehkeeLaklGfelee..........fgpnsli 92 
                 la++ ++ lv++DqhaA+eri  e l e+l+  +          +ks  L+ Pl+++l+p+e++ll +++  + + Gf  +            ++++li
  KHJ32947.1 734 LAQRSEDlLVMIDQHAADERIRIESLLEELCTPAmitevdspyrVKSYILMRPLIISLPPNEIELLFTYRNYFLSWGFSYKLpahgsvsnqtNNNQTLI 832
                 45555555*********************9998899999***************************************998755555555555555555 PP

                 EEEEECC CS
      MutL_C  93 vravPal 99 
                 v + P +
  KHJ32947.1 833 VLSLPPV 839
                 5555555 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   2.2e-07   0.00099       7      81 ..      24      99 ..      21     153 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 2.2e-07
                HHHHHHHHHHHHHHHSTTTEEEEEEEEEETEEEEEEEESSSSSTTHHHTGTCS...TTCH..HCSTCHTSTSSSHHHHHH CS
   HATPase_c  7 rqiisnlvdNavkfatkageieveikaseddlvisveDnGiGipkedlkklfe...kfsq..ddstkrggggtGlGlsiv 81
                  ++  l +N++++  ++++ie++++ s  +    veDnG Gi +++  ++++   ++ +  + +t++ +g++G +l+  
  KHJ32947.1 24 NDVVLALFKNSLDA--SCTKIEITVDYS--RGLCVVEDNGVGILPSEFRESGGlgkPYHTskQYETEVVHGRRGNSLASI 99
                5689999******6..89*******944..56666************997776665888865555555578887766655 PP

>> 3-PAP  Myotubularin-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.041   1.8e+02      77     100 ..     337     360 ..     332     387 .. 0.81
   2 ?    6.0   0.0     0.002         9      22      81 ..     470     527 ..     456     530 .. 0.73
   3 ?    0.2   0.1      0.13   5.7e+02      12      81 ..     834     905 ..     823     907 .. 0.69

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.041
       3-PAP  77 sgkqiklWkqcYlRwvPeaqikhG 100
                 ++k i+ W ++Yl  +Pe+ ++++
  KHJ32947.1 337 CVKGIEKWPKFYLNILPEVTVEKS 360
                 6778999************99876 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.002
       3-PAP  22 lfrdeeallrrnslllrlksdlllaessdsndseqffrewlskpadlhglLlpqlsgkqi 81 
                 l +d +++ +r++ l r++s ++  +++++ d ++f +  +s p+    +L+p+++ +qi
  KHJ32947.1 470 LSNDITSKIKRGK-LTRASS-ISMLNNESKLDDQEFTERSFSLPLKVTNVLEPRVCERQI 527
                 4444445555544.455555.4556666777779**********************9997 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.13
       3-PAP  12 rgspp..........slknglfrdeeallrrnslllrlksdlllaessdsndseqffrewlskpadlhglLlpqlsgkqi 81 
                  + pp          +l  +l+r+e ++l+++   l++ s +     s+s     +++  +++p+   +lL  +++ ++i
  KHJ32947.1 834 LSLPPviaercqqqpHLLSSLLRKEICKLQDSNDNLQVLSTF-----SSS---TSWLDRIHTCPVGVLDLLNTRACRSAI 905
                 555555555555555788888888888888888888888866.....222...347788899999999999888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (984 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.39
# Mc/sec: 7571.59
//
Query:       KHJ32948.1  [L=382]
Description: hypothetical protein EV44_g0945 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.17   12.3   0.1          1    9.8   0.0    2.3  3  DUF4019   Protein of unknown function (DUF4019)


Domain annotation for each model (and alignments):
>> DUF4019  Protein of unknown function (DUF4019)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.22     4e+03      65      90 ..      62      87 ..      24      91 .. 0.62
   2 ?    9.8   0.0   5.7e-05         1      54      84 ..     182     212 ..     170     219 .. 0.85
   3 ?   -3.4   0.0      0.74   1.3e+04      35      52 ..     294     311 ..     287     314 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.22
     DUF4019 65 aPdGeYvviqfetefenkkqavEtvt 90
                +     ++++ e+ + n +q++E vt
  KHJ32948.1 62 LAFPLNINLRSESPYINGDQVTEIVT 87
                33334466677777888888888887 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 5.7e-05
     DUF4019  54 asaeearslpgaPdGeYvviqfetefenkkq 84 
                 +s+  + ++p+ P+ +Yv+iqf+ +f++ +q
  KHJ32948.1 182 HSTAAMVTTPNNPNNNYVAIQFSHQFPSSSQ 212
                 556666799*****************99876 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 0.74
     DUF4019  35 ekalkavraplGavksRk 52 
                 e++ ++ r ++G +++R 
  KHJ32948.1 294 EQNSHQQRPSIGGLNERG 311
                 677889999999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2876.09
//
Query:       KHJ32949.1  [L=280]
Description: hypothetical protein EV44_g0305 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-74  251.1   0.1    1.5e-74  250.9   0.1    1.0  1  GH131_N   Glycoside hydrolase 131 catalytic N-terminal domain


Domain annotation for each model (and alignments):
>> GH131_N  Glycoside hydrolase 131 catalytic N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  250.9   0.1   8.6e-79   1.5e-74       1     257 []      24     274 ..      24     274 .. 0.96

  Alignments for each domain:
  == domain 1  score: 250.9 bits;  conditional E-value: 8.6e-79
     GH131_N   1 vlfDGRvpanataadfdklstsqvkpyltvvkgsesaseyltlskeakspadksktkvlkvkiddkSiFvpgenaqtgfrRaellpqkdelndaieeGv 99 
                 v fD Rvpa  +  +fd+++ s++ +  +v+    ++s++ltl+++ +s++d+ kt +++v+i+dkSiF    n+qtgfrR ellp++ + +d  +eG+
  KHJ32949.1  24 VQFDARVPAGSKPGSFDAKT-SVFRT-DAVIGEGLKFSDVLTLPPVVPSIFDV-KTIPVEVSITDKSIF----NHQTGFRRCELLPESVDVDDPSTEGI 115
                 78*****************5.99999.6666666******************9.999************....************************** PP

     GH131_N 100 ttfhfSvkkdearplnltheyqivflEsa.ysshvfdlkvgtpfgsdtaradtlkv.ldaalktlfstpfekgtwhNFavevdfdastlqvyyStgeap 196
                 +t hfSv+++  +p+n theyq++f+E + + ++++ lk+gt+ g++++ +d + + + ++ ++lf tpf+++++hNFa+++df+++ ++v+yS+g++p
  KHJ32949.1 116 KTVHFSVMQNSMKPINITHEYQLAFMEDKeFTTNQWVLKTGTIAGQKQDPNDLVLLgNVKDGEVLFTTPFTENVFHNFALTLDFNDNHITVFYSKGSSP 214
                 *********************************************9888777777688999************************************** PP

     GH131_N 197 LkkvtepiandtsggggefhfgllklplanqsdvvhdGiqesgiqegliysGvfvEdstdg 257
                 L++v ++++nd +g+g e+hfg+lk+ l+  sdv+++Giqe+gi+eg+i++G+f Eds dg
  KHJ32949.1 215 LQNVLTRTPNDLTGRG-EYHFGILKKGLGSSSDVTKNGIQEQGIDEGMIFGGIFQEDSIDG 274
                 *************998.*****************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       298  (0.0166211); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 2012.68
//
Query:       KHJ32950.1  [L=161]
Description: hypothetical protein EV44_g0738 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-50  170.2   0.1    4.2e-50  170.0   0.1    1.0  1  DUF1993   Domain of unknown function (DUF1993)
  ------ inclusion threshold ------
       0.07   13.0   0.1      0.087   12.7   0.1    1.0  1  DUF2797   Protein of unknown function (DUF2797)


Domain annotation for each model (and alignments):
>> DUF1993  Domain of unknown function (DUF1993)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.0   0.1   4.7e-54   4.2e-50       1     161 []       4     160 ..       4     160 .. 0.97

  Alignments for each domain:
  == domain 1  score: 170.0 bits;  conditional E-value: 4.7e-54
                 HHHHCHHHHHHHHHHHHHHHHHHHCCHHHHC..HHHHHT--SSTTS--HHHHHHHHHHHHHHHHCHHCT-GS----S.-SSHHHHHHHHHHHHHHHHCS CS
     DUF1993   1 lydasvpvfikglknlsalLkkaeahaaakkidpeellearLapDMlpLsfQvqiatdtakkavarlagkeppsledeektfadlrariaktialLesv 99 
                 ly++s+pvf+k lk+ls++++k++ah a ++   ++l+++rL+ DM +++fQ+q +td+a+ +++rl + +p ++e++ekt+++l++r++kti++Lesv
  KHJ32950.1   4 LYEISIPVFTKKLKSLSKIMEKGAAHEAVSN---DQLVNTRLIADMENFTFQIQKVTDAARFVAERLGKITPIEYENNEKTYEELQERVKKTIEILESV 99 
                 8*************************99886...99*************************************************************** PP

                 -GGGHCCCCCEEEE.C.CCCCEEEEHHHHHHHTHHHHHHHHHHHHHHHHHHCT----HHHHH CS
     DUF1993 100 dpekldakeekevelklggkeleftgeeyllefalPnfyFHlttaYaILRkkGVelGkaDyl 161
                 +++++  +ee +++++++g  l+ tg++++le++ PnfyFHl+taYa+LRk+GV++Gk+D+l
  KHJ32950.1 100 KESDFG-SEEDDLSFTVKGYFLKHTGKSFILEWITPNFYFHLVTAYALLRKEGVNIGKRDFL 160
                 ****96.56789999**********************************************7 PP

>> DUF2797  Protein of unknown function (DUF2797)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   9.7e-06     0.087      87     190 ..      13     122 ..      11     132 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 9.7e-06
     DUF2797  87 TrkeqvptRwidQGAvqaiplae..vanRrlaglvevalket.vaDktnwrkmlksevedvdlsaeaeelaeliae...eselgaeaiesleaeeevei 179
                 T+k +  +  ++ GA +  +     v++R +a +   +++ + v+D  ++++ + +++++++ ++ +++ +el ++   + e+ ++++es   +ee ++
  KHJ32950.1  13 TKKLKSLSKIMEKGAAHEAVSNDqlVNTRLIADMENFTFQIQkVTDAARFVAERLGKITPIEYENNEKTYEELQERvkkTIEILESVKESDFGSEEDDL 111
                 78888899999***98766655558**********99999777****************9988777666555555531144444455555545588999 PP

     DUF2797 180 kypveeypeki 190
                 ++ v+ y  k 
  KHJ32950.1 112 SFTVKGYFLKH 122
                 99999987654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1462  (0.0815439); expected 358.6 (0.02)
Passed bias filter:                      860  (0.047967); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1152.83
//
Query:       KHJ32951.1  [L=278]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2116.82
//
Query:       KHJ32952.1  [L=538]
Description: putative myo-inositol-1-phosphate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.2e-142  475.0   0.1   1.4e-142  474.8   0.1    1.0  1  NAD_binding_5   Myo-inositol-1-phosphate synthase
    9.2e-46  154.6   0.8    2.1e-45  153.4   0.8    1.7  1  Inos-1-P_synth  Myo-inositol-1-phosphate synthase


Domain annotation for each model (and alignments):
>> NAD_binding_5  Myo-inositol-1-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  474.8   0.1  1.6e-146  1.4e-142       1     322 []      79     520 ..      79     520 .. 0.99

  Alignments for each domain:
  == domain 1  score: 474.8 bits;  conditional E-value: 1.6e-146
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_5   1 lGvllvGlgGnngtTlvagvlankkglswetkeglkkanylGsvtqsstirlGkdeeegedvyvpikdllplvnpndlvfgGwDisslnlaeamer 96 
                    +G++lvGlgGnngtT++ag++an +gl+wet++gl+ any+Gs++++sti+lG d+++ +dv++p++++lp+v+pndlv+gGwDiss+nla+am+r
     KHJ32952.1  79 TGMMLVGLGGNNGTTITAGIIANCRGLTWETRDGLRAANYYGSLVMASTIKLGIDSNTLKDVNIPLHRILPMVHPNDLVIGGWDISSMNLAQAMDR 174
                    69********************************************************************************************** PP

                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_5  97 akvldkdlqeqlkpelekikplksvydkdfiaanqeeradnvlkgk.skleqleqirkdireFkkknkldkvivlwtanTEryievipgvndtlen 191
                    a+vl+++l++++++e++k++pl+s+y++dfiaanqe+ra+n+lkg+    e++e+irkdi++Fk+k +l+kvivlwtanTEry+evipg+nd+++n
     KHJ32952.1 175 ASVLEPSLKTAVREEMAKMVPLPSIYYPDFIAANQEDRANNCLKGNkACNEHVEHIRKDIQDFKSKRNLEKVIVLWTANTERYAEVIPGINDSAQN 270
                    *******************************************99856789********************************************* PP

                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................................... RF
  NAD_binding_5 192 llkaikeneeeispstiyavAailegvpyingsPqntlvpglvelAekkgvfiaGdDfKt.................................... 251
                    llk+i++ ++e+spsti+avA+ilegvp+ingsPqnt+vpg++elAek++ +i+GdDfK+                                    
     KHJ32952.1 271 LLKSIENGHKEVSPSTIFAVASILEGVPFINGSPQNTFVPGVIELAEKHKSYIGGDDFKSgqtkmksvlvdflvnagikltsiasynhlgnndgkn 366
                    ************************************************************************************************ PP

                    ..............................................................................xxxxxxxxxxxxxxxxxx RF
  NAD_binding_5 252 ..............................................................................lLAaPlilDLvllveLaq 269
                                                                                                  lLA+Pli+DLvl++eL++
     KHJ32952.1 367 lsskhqfrskeisksnvvddmveannilykenerpdhtvvikympavgdnkraldeyyaeiflgghqtisifnvcedsLLASPLIIDLVLITELMT 462
                    ************************************************************************************************ PP

                    xxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_5 270 rvevkk.....ekkkefkklesvlsllsyflKaPlvskgtkvvnalfkQraalenilR 322
                    r+++++     +++k f+++++vls+lsy+lKaPl+s g +vvnal+kQr+al ni+R
     KHJ32952.1 463 RIQWRAttndgDSTKCFQDFHAVLSILSYMLKAPLTSAGKPVVNALAKQRNALVNIFR 520
                    *****76777789999****************************************99 PP

>> Inos-1-P_synth  Myo-inositol-1-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.4   0.8   2.4e-49   2.1e-45       1     109 []     331     444 ..     331     444 .. 1.00

  Alignments for each domain:
  == domain 1  score: 153.4 bits;  conditional E-value: 2.4e-49
                     SHHHHHHHHHHHHHHTT-EEEEEEEEEEE-HHHHHHTTSHHHHHHHHHHHHHHHHHHHSS--EEE.........EEEEE-GGGTTEEEEEEEEEE CS
  Inos-1-P_synth   1 GqTklksvLaellverglkvksivslNilGnnDgknlseeerfksKkisKssvvddivkanelly.....vdhevvikYvpylgDsKvaldeies 90 
                     GqTk+ksvL+++lv++g+k++si+s+N+lGnnDgknls++++f+sK+isKs+vvdd+v+an++ly     +dh+vvikY+p++gD+K+alde+ +
      KHJ32952.1 331 GQTKMKSVLVDFLVNAGIKLTSIASYNHLGNNDGKNLSSKHQFRSKEISKSNVVDDMVEANNILYkenerPDHTVVIKYMPAVGDNKRALDEYYA 425
                     9********************************************************************************************** PP

                     EEGGGEEEEEEEEEEEEH. CS
  Inos-1-P_synth  91 eiflggkntielkleceDS 109
                     eiflgg++ti++ + ceDS
      KHJ32952.1 426 EIFLGGHQTISIFNVCEDS 444
                     ******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (538 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       768  (0.0428356); expected 358.6 (0.02)
Passed bias filter:                      617  (0.0344135); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.39
# Mc/sec: 4091.31
//
Query:       KHJ32953.1  [L=770]
Description: putative serine threonine-protein kinase mak protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-55  188.6   0.0      2e-55  188.0   0.0    1.3  1  Pkinase          Protein kinase domain
    1.3e-32  113.1   0.0    8.5e-31  107.2   0.0    2.2  2  Pkinase_Tyr      Protein tyrosine kinase
    0.00071   18.6   0.0     0.0013   17.8   0.0    1.3  1  Haspin_kinase    Haspin like kinase domain
  ------ inclusion threshold ------
      0.074   12.0   0.0       0.11   11.4   0.0    1.2  1  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
       0.17   11.2   0.3       0.42    9.9   0.3    1.6  1  Kdo              Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.0   0.0   5.5e-59     2e-55       1     264 []      11     339 ..      11     339 .. 0.87

  Alignments for each domain:
  == domain 1  score: 188.0 bits;  conditional E-value: 5.5e-59
                 EEEEEEEEEESSEEEEEEEETTTTEEE.......EEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEE..SSEEEEEEE--TTEBHHHHH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkiv.......AvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfee..kdelylvleyveggeladll 89 
                 +e l+++G GsfG+V  a+ ++ g  v       A+K++kk+ ++  +    lrE+ +l +l  h ++v  +++f +  +++l++ +ey+eg+ l +l+
  KHJ32953.1  11 FEILKEIGDGSFGSVSLARVRTAGSNVarrgtviAIKTMKKDFESYAMC-LELREVVFLTTLPnHIHLVPALDIFLDpfTKKLHIAMEYMEGN-LYQLM 107
                 67899**********9999887665441111111799999998888886.779*********88*************999***********66.88888 PP

                 H..HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTE........................EEE-SGTTSEESSSSCSBCTTTSCGG CS
     Pkinase  90 e..rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekge........................lKitDFGlakelessskltsfvgtse 162
                 +  ++++l+ + +k+i+ qil+gle++H+++++HrD+KpeNiL++++g+                        +Ki+DFGla+e +s+ ++t++v t++
  KHJ32953.1 108 KarEHKCLDVSSVKSILFQILQGLEHIHAHHFFHRDIKPENILVSTSGHqdtgssfrrystlmtppstppaytVKIADFGLARETHSKLSYTTYVSTRW 206
                 8777888**************************************8555555556666666666666677778************************** PP

                 GS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS........................... CS
     Pkinase 163 YlAPEvl.keneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeasei........................... 233
                 Y+APEvl ++ eys++vD+W++G + +e+ t kp+f+   g +    e+dq+ +i++i+g    ++ ++s +                           
  KHJ32953.1 207 YRAPEVLlRAGEYSSPVDIWAIGAMAVEIATLKPLFP---GAN----EVDQVWRICEIMGS-PGNWYNKSGFqigggewkdgtrlanklgfsfpkmaph 297
                 *******99****************************...444....78999999999984.334444444466888888999999999********** PP

                 ...........-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 234 ...........seeakdllkkllkkdpkkRltaeellqhpyl 264
                            + ++ +l++++lk+dpk+R+t +++l+h++l
  KHJ32953.1 298 sidhilqspqwPTSFSNLVTWCLKWDPKSRPTSSQALAHEFL 339
                 ***************************************996 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.2   0.0   2.4e-34   8.5e-31       2     201 ..      12     238 ..      11     258 .. 0.91
   2 !    3.6   0.0    0.0093        33     226     254 ..     304     332 ..     293     338 .. 0.85

  Alignments for each domain:
  == domain 1  score: 107.2 bits;  conditional E-value: 2.4e-34
                  EEEEEEEEESSEEEEEEEEET...TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHHHHH CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkg...ekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvct..keepllivteyvkgGdLlkfLr 93 
                  e+ k++G G+fG+V  +++++   +  ++ + +a+Kt+k++ ++  +   l+e+ ++++l +h ++v  l + +   +++l i +ey++ G+L + ++
   KHJ32953.1  12 EILKEIGDGSFGSVSLARVRTagsNVARRGTVIAIKTMKKDFESYAMCLELREVVFLTTLpNHIHLVPALDIFLdpFTKKLHIAMEYME-GNLYQLMK 108
                  6789****************9887777888999************99999************************776788********7.8******* PP

                  HTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE........................TTEEEE-STTTHEETTTSSEEEETTSSTS CS
  Pkinase_Tyr  94 kkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse........................nkvvkisDfGLardiekddeyvkkeeakl 167
                  ++e++ l+++++ s+ +q+ +G+e+++++++ Hrd+   N+L+s+                          +vki+DfGLar+++++ +y    ++ +
   KHJ32953.1 109 AREHKCLDVSSVKSILFQILQGLEHIHAHHFFHRDIKPENILVSTsghqdtgssfrrystlmtppstppAYTVKIADFGLARETHSKLSY----TTYV 202
                  ********************************************99*********************9999*************555555....5678 PP

                  GGGGS.-HHHH.HHSEEEHHHHHHHHHHHHHHHHTT CS
  Pkinase_Tyr 168 pvkWm.apEsl.kekkftsksDvWsfGvllwEiftl 201
                  + +W+ apE+l ++++++s  D+W+ G +  Ei+tl
   KHJ32953.1 203 STRWYrAPEVLlRAGEYSSPVDIWAIGAMAVEIATL 238
                  888988***9626788*****************995 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.0093
                  BBTTSBHHHHHHHHHHT-SSGGGS--HHH CS
  Pkinase_Tyr 226 kpekcpeelyelmkkcweedpeeRptfse 254
                  +  ++p+++ +l++ c++ dp++Rpt s+
   KHJ32953.1 304 QSPQWPTSFSNLVTWCLKWDPKSRPTSSQ 332
                  556799*******************9876 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   3.6e-07    0.0013     201     266 ..     113     199 ..      89     205 .. 0.88

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 3.6e-07
  Haspin_kinase 201 klkswkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdkn........................lnvtlidlklsRlessegkvlyt 266
                    k+ +++ ++si++qi++ L    +  +F HRd++ +niLv  +                         +v + d+ l+R +  ++k++yt
     KHJ32953.1 113 KCLDVSSVKSILFQILQGLEHIHA-HHFFHRDIKPENILVSTSghqdtgssfrrystlmtppstppaYTVKIADFGLARET--HSKLSYT 199
                    6678999************99865.6899*************9************************************86..5555555 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.1e-05      0.11     293     315 ..     132     154 ..     104     175 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.1e-05
  Pox_ser-thr_kin 293 elpdcenflhvDlkPdniLifds 315
                      e    + f+h D+kP+niL+  s
       KHJ32953.1 132 EHIHAHHFFHRDIKPENILVSTS 154
                      3446789************9877 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.3   0.00012      0.42     109     157 ..     109     157 ..      88     163 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00012
         Kdo 109 lakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeee 157
                 +++++ l++++ + +l ++ +  + +h+ +  H+d+ + nil+ + +++
  KHJ32953.1 109 AREHKCLDVSSVKSILFQILQGLEHIHAHHFFHRDIKPENILVSTSGHQ 157
                 344444899999999999*************************999843 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (770 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.38
# Mc/sec: 6014.75
//
Query:       KHJ32954.1  [L=1497]
Description: putative rnase3 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-40  138.1   0.1    1.4e-22   80.3   0.0    3.0  2  Ribonuclease_3   Ribonuclease III domain
    3.8e-24   84.7   0.0    1.1e-23   83.2   0.0    1.8  1  Dicer_dimer      Dicer dimerisation domain
    6.8e-24   84.5   1.8    1.1e-11   45.0   0.0    4.7  4  Ribonucleas_3_3  Ribonuclease-III-like
    1.4e-17   64.1   0.1    4.9e-17   62.3   0.1    2.0  1  Helicase_C       Helicase conserved C-terminal domain
    3.2e-16   59.6   0.0    6.3e-16   58.6   0.0    1.5  1  DEAD             DEAD/DEAH box helicase
    4.3e-12   46.4   0.0    1.1e-11   45.0   0.0    1.7  1  ResIII           Type III restriction enzyme, res subunit
    0.00051   19.7   0.0     0.0016   18.1   0.0    1.8  1  DEAD_2           DEAD_2


Domain annotation for each model (and alignments):
>> Ribonuclease_3  Ribonuclease III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.3   0.0   5.4e-26   1.4e-22       1     105 []    1041    1147 ..    1041    1147 .. 0.94
   2 !   54.7   0.1   5.1e-18   1.3e-14       1     105 []    1227    1377 ..    1227    1377 .. 0.74

  Alignments for each domain:
  == domain 1  score: 80.3 bits;  conditional E-value: 5.4e-26
                      HHHHHHHHHHHHHHHHHHHHHHCTTSSHHHHHHHHHHHTSHHHHHHHHHCTTCHCCHCHH................HHCCSTTCHCTSHHHHH CS
  Ribonuclease_3    1 erLeflGDavlklaittylfetypdahegrlsklrsklvsnenlarlakklglpkflrasefdpprnwlppgy..klsddekedddadkvlad 91  
                      +rLeflGD +lkl+++ +++ + p +heg+ls+ +  lv n  lar+a +lg++kf+++++f+  +++    +    ++de++++ ++kvlad
      KHJ32954.1 1041 QRLEFLGDNILKLCASVQIMAENPLWHEGQLSNRKDHLVANSRLARAAIDLGIDKFIVTKSFTGLKWHPTYINgiLNTKDEEQRELSSKVLAD 1133
                      7****************************************************************999887779877777788899******* PP

                      HHHHHHHHHHHHCT CS
  Ribonuclease_3   92 vvEAliGaiyldsg 105 
                      vvE+l+G+  ld+g
      KHJ32954.1 1134 VVESLLGVTMLDGG 1147
                      **********9987 PP

  == domain 2  score: 54.7 bits;  conditional E-value: 5.1e-18
                      HHHHHHHHHHHHHHHHHHHHHHCTTSSHHHHHHHHHHHTSHHHHHHHH...............................HCTTCHCCHCHH.. CS
  Ribonuclease_3    1 erLeflGDavlklaittylfetypdahegrlsklrsklvsnenlarla...............................kklglpkflrasef 62  
                      erLef+GDa+l+++i++ +++ y d+++ r+++lr+++v+++ la+l+                               +++ l+ f+r+++ 
      KHJ32954.1 1227 ERLEFIGDAILDYVIVQEIYS-Y-DLSHIRMHELRTAFVNADLLAFLCfelhanrkvfdirlasedskntdsirceeslHQVHLYCFMRHNSY 1317
                      8********************.7.59**********************555555555555555555555555555555544455555554444 PP

                      ............HHCCSTTCHC............................TSHHHHHHHHHHHHHHHHHCT CS
  Ribonuclease_3   63 dpprnwlppgyklsddekeddd............................adkvladvvEAliGaiyldsg 105 
                      ++++  ++             +                            a+k+++d++E+l++a+++dsg
      KHJ32954.1 1318 AISQVQKYT---N--------ErfkdlrdeilnalenggeypwkalcglkAEKFYSDMIESLLAAVWVDSG 1377
                      444444433...2........244444555788888999999999999*********************97 PP

>> Dicer_dimer  Dicer dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.2   0.0   4.1e-27   1.1e-23       1      90 [.     661     749 ..     661     751 .. 0.97

  Alignments for each domain:
  == domain 1  score: 83.2 bits;  conditional E-value: 4.1e-27
  Dicer_dimer   1 aislLnrycatlpsdeytdlrpeyevkevedkergkfqaevtLPsnsp..lrkieg.epmstkklAkrsaAfeackeLhkaglLddhLlPlsk 90 
                  a+s+L+++cat+p d+y+d+rpe++++++    +g + ++++LP++++  +r++++ ++++++k+A r+aAfea++ L++agl+ d+LlPl +
   KHJ32954.1 661 AVSHLYHFCATIPCDKYIDTRPEFITHKE----NGLYYVKIVLPISVHekIRTAKSsHAWKSEKNAIRDAAFEAYVTLYNAGLISDNLLPLMR 749
                  89************************999....****************99***999*********************************987 PP

>> Ribonucleas_3_3  Ribonuclease-III-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.0   4.2e-15   1.1e-11      20     121 ..    1038    1156 ..    1021    1162 .. 0.82
   2 !   27.3   0.1   1.2e-09   3.2e-06       2      76 ..    1207    1279 ..    1206    1303 .. 0.78
   3 ?    2.1   0.0     0.078     2e+02       9      35 ..    1312    1340 ..    1305    1350 .. 0.83
   4 !    5.3   0.0    0.0083        21      92     123 ..    1357    1388 ..    1348    1391 .. 0.84

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 4.2e-15
  Ribonucleas_3_3   20 ghNerLefLGdavLklsvseyllekaek.degeltklraslvseeslaeiAkelgLgkvlrl................rkgeeetegsgrek 94  
                       ++++rLefLGd++Lkl+ s  ++ +    +eg+l++++++lv + +la+ A++lg++k++                   ++++e++ +  +k
       KHJ32954.1 1038 SNYQRLEFLGDNILKLCASVQIMAENPLwHEGQLSNRKDHLVANSRLARAAIDLGIDKFIVTksftglkwhptyingiLNTKDEEQRELSSK 1129
                       689************99877776665555**************************9999998888899999999988644344444445566 PP

  Ribonucleas_3_3   95 vladaleAliGAiyldkgaevaqefve 121 
                       vlad++e+l+G   ld+g+ ++ +  +
       KHJ32954.1 1130 VLADVVESLLGVTMLDGGFPKVITCLN 1156
                       ******************988766655 PP

  == domain 2  score: 27.3 bits;  conditional E-value: 1.2e-09
  Ribonucleas_3_3    2 eelleqaltHkSfangrkghNerLefLGdavLklsvseyllekaekdegeltklraslvseeslaeiAkelgLgk 76  
                       ++l+ +altH S ++g+ ++ erLef+Gda+L+ ++++++++ ++ +++++ +lr+++v+ + la +  el+ ++
       KHJ32954.1 1207 KSLMIEALTHASDQSGS-RSFERLEFIGDAILDYVIVQEIYS-YDLSHIRMHELRTAFVNADLLAFLCFELHANR 1279
                       68999*******66555.678*************99999875.67888999999999999998888777766555 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.078
  Ribonucleas_3_3    9 ltHkSf..angrkghNerLefLGdavLkl 35  
                       + H+S+  ++ +k +Ner++ L d++L+ 
       KHJ32954.1 1312 MRHNSYaiSQVQKYTNERFKDLRDEILNA 1340
                       67****665667789*********99985 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.0083
  Ribonucleas_3_3   92 rekvladaleAliGAiyldkgaevaqefveek 123 
                        ek  +d++e+l++A+ +d+g  +a   v e+
       KHJ32954.1 1357 AEKFYSDMIESLLAAVWVDSGSLNAVVNVVEH 1388
                       677889***************99998766665 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.3   0.1   1.9e-20   4.9e-17       1     107 [.     463     587 ..     463     590 .. 0.79

  Alignments for each domain:
  == domain 1  score: 62.3 bits;  conditional E-value: 1.9e-20
                 HHHHHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHT.....TSTEEEESTT.............STHHHHHHHHHHHHTTSSSEEEESGGGTSSST CS
  Helicase_C   1 dkleallellkleeeggkilifvntidrlekvklllekk.....gikvavlhge.............lpqnereeileqfnkgesdvLiatdvaerGid 81 
                 dk+++l+e+l ++e+g   ++fv+ +  ++ +  lle++      ++v ++ g+             + +++++ +l++f++g++++Li t+v+e+Gid
  KHJ32954.1 463 DKVSKLIEILLEQEKGFSGIVFVQERAVVSCLASLLENHpqcrgILQVGKFVGTsvfsrrftsnfdlIDTDSQNNALHDFRDGKTNLLIGTSVLEEGID 561
                 6899999**8788999999********66444444444455554233333333344555555666679999**************************** PP

                 STTESEEEESSSSSSHHHHHHHHTTS CS
  Helicase_C  82 ipkvnlVinfdlprnvtsyiqriGRt 107
                 ip +nlV  f+ p n++syiqr+GR+
  KHJ32954.1 562 IPTCNLVLCFQKPANLKSYIQRRGRA 587
                 *************************8 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.6   0.0   2.5e-19   6.3e-16       3     167 ..     114     276 ..     112     282 .. 0.80

  Alignments for each domain:
  == domain 1  score: 58.6 bits;  conditional E-value: 2.5e-19
                 HHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHH...TTC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxx RF
        DEAD   3 iQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskld...ngv 98 
                 +Q e+++++  ++++++a++TGsGKT ++++ +  ++   +  +++ + +++Pt +L+ q++n +++ +   ++++l+   +v++  ++++ d   ++v
  KHJ32954.1 114 YQIEMFEECQ-KKNIIIAMDTGSGKTHIAVMKIKFELD--RMPRNKIIWFLTPTVSLCFQQYNYIQSQIRSSEIKILSSSDNVDRWTEQTVWDsvlKNV 209
                 6777777775.88***************9999996662..35555556689*******************9999999999999999998888766688* PP

                 SEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTST.TTSEEEEEES CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx RF
        DEAD  99 divvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgk.lqrqvivlSA 167
                 +ivv+  + l+d l+ g ++++++ +lVlDEa++  +++ +  i + + +    ++++     q++ l+A
  KHJ32954.1 210 EIVVSPYQILLDALTHGFVKFDSLALLVLDEAHNCIKKSPGARIMNSFYHP---QKSQGlYVPQILGLTA 276
                 ************999999******************996665555544443...2222213334666666 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.0   4.3e-15   1.1e-11       3     169 ..     110     278 ..     108     280 .. 0.79

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 4.3e-15
                 EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHH.HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.... CS
      ResIII   3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlva.aklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkka.... 96 
                 ++r+yQ+e+ e+        ++k+++i+m TG+GKT +a +k+  +l +  +++ + fl p+ sl+ q ++ +++ + +    i+   s+d+ ++    
  KHJ32954.1 110 KPRSYQIEMFEEC-------QKKNIIIAMDTGSGKTHIAvMKIKFELDRMPRNKIIWFLTPTVSLCFQQYNYIQSQIRSSE--IKILSSSDNVDRwteq 199
                 6777777777777.......5899***************99************9****************99999888875..6666667777775555 PP

                 .........-SEEEEEHHHHHHTH........HHHTTT-S...EEEEETGGGTTS.TTTHHHHHT---.........SEEEEEESS- CS
      ResIII  97 ..kekdstnkkilvttiqsldadseeeeeeseellrdrfd...viiiDEaHrlgakkswreilekfke.........avllglTATp 169
                     +  +n +i+v+ +q l  ++     ++   +    d   +++ DEaH+  +k+   +i+++f +           +lglTA p
  KHJ32954.1 200 tvWDSVLKNVEIVVSPYQILLDAL-----THGFVKF---DslaLLVLDEAHNCIKKSPGARIMNSFYHpqksqglyvPQILGLTASP 278
                 555566777777777777777777.....2233333...2556************88888899999555667899999999999988 PP

>> DEAD_2  DEAD_2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   6.3e-07    0.0016     118     161 ..     205     246 ..     201     254 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 6.3e-07
                 HHCCTSEEEEEHHHHTSCCCHHHHHT..GCGCEEEECTCCCHHH CS
      DEAD_2 118 lledadiiilpYqyLldekireslkgislknsivilDEAhNied 161
                 +l++++i++ pYq+Lld+ +   +k +  +   ++lDEAhN ++
  KHJ32954.1 205 VLKNVEIVVSPYQILLDALTHGFVK-F-DSLALLVLDEAHNCIK 246
                 57899*******************9.5.4567899******765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1497 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.85u 0.25s 00:00:01.10 Elapsed: 00:00:00.44
# Mc/sec: 10287.37
//
Query:       KHJ32955.1  [L=665]
Description: hypothetical protein EV44_g6224 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.046   13.6   0.4       0.11   12.4   0.1    1.8  1  Sigma70_ner  Sigma-70, non-essential region


Domain annotation for each model (and alignments):
>> Sigma70_ner  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   6.1e-06      0.11       7      89 ..     372     451 ..     368     486 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.1e-06
  Sigma70_ner   7 ellelydrve.ageirLrdiidGflDeeeeeeeeeeeedeeeeeeeedddeeeseseaadeeelkeealekfeelreqyeklrk 89 
                  e+++   +++ ++ei L++++++flD+ ++++++ +e +++++e+    + +   s++ +++++ +++  k ++ ++ y ++++
   KHJ32955.1 372 EIINCVSKMRrQDEILLQEVLQAFLDS-KNNSSSHNEYRNDSDEK---TKTKWRRSSKRSLNPDVPDFHPKTNNTSDGYTEIER 451
                  5666666665167*************4.44444444444444433...223456788888888888888888888888877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (665 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1095  (0.0610742); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 4503.01
//
Query:       KHJ32956.1  [L=507]
Description: putative nucleic acid-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0013   18.6   0.6     0.0055   16.6   0.1    2.3  3  REPA_OB_2  Replication protein A OB domain


Domain annotation for each model (and alignments):
>> REPA_OB_2  Replication protein A OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.43   7.7e+03      35      58 ..      15      38 ..       8      48 .. 0.71
   2 ?   -2.0   0.0      0.19   3.4e+03      41      59 ..     105     126 ..      84     157 .. 0.67
   3 !   16.6   0.1   3.1e-07    0.0055      13      65 ..     214     268 ..     205     280 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.43
   REPA_OB_2 35 kelkkreltlvDesgasvevtlWg 58
                k++ kre++   ++++++ +t  g
  KHJ32956.1 15 KSFYKREVQTEQQTSSHILCTKVG 38
                467788888877777777777655 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.19
   REPA_OB_2  41 eltlvDesga...svevtlWgk 59 
                  l ++D++ga    + vtlW  
  KHJ32956.1 105 YLIIKDDTGAifvGLFVTLWTA 126
                 5777888876433456788876 PP

  == domain 3  score: 16.6 bits;  conditional E-value: 3.1e-07
   REPA_OB_2  13 vDvigvvksveevseitskstekelkkreltlvDesgasvevtlWgk...eaekfe 65 
                 + ++ vvk+++ +++i +k++ +  +  ++ l+D++  ++++tlW++   +a++++
  KHJ32956.1 214 IKILVVVKNITSSRKIKRKNGDEVDEVTNVGLMDNTA-ECSLTLWNDlipSAHSWH 268
                 67999*****************6667799*****986.78******9877777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       654  (0.0364772); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3627.00
//
Query:       KHJ32957.1  [L=270]
Description: putative duf124 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-54  183.4   0.1    5.1e-54  183.1   0.1    1.0  1  AIM24     Mitochondrial biogenesis AIM24


Domain annotation for each model (and alignments):
>> AIM24  Mitochondrial biogenesis AIM24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.1   0.1   2.8e-58   5.1e-54       1     201 []      56     254 ..      56     254 .. 0.95

  Alignments for each domain:
  == domain 1  score: 183.1 bits;  conditional E-value: 2.8e-58
                 EEEESS.SS-EEEEEE-TT-EEEE-CCGEEEEETTEEEEE--------------EEEEEEES.SS-EEEEE--SSSEEEEEEEGGTT.EEEEEGGGEEE CS
       AIM24   1 fevlge.pssllsvtLspgeelyaerGalvamsgkvemetgllkalkrlltgeslfllkftakissgtvllapklpgtivtlelgggdwlivqkdafLA 98 
                 ++++++ + s+l+++L+  ++l++++Ga+++ms+++++++ ++ ++k+l++g  ++ +++t+   +g++llap+++g+i +++++++++++v++dafLA
  KHJ32957.1  56 YRISHRdTNSILTIQLAVLCPLTVKPGAMISMSSTLTLKGAIKFSVKKLIAGGEMSSSTYTG---PGEILLAPPALGDISSISVSENQRWFVGRDAFLA 151
                 678888899******************************99999*****************5...5******************9899*********** PP

                 EETT-EEEEEEEE--.SSGGGTS-EEEEEEESSSEEEEEEECSEEEEEEE.EEEEEEEGGGEEEEETTEEEEEEEETT---STTTTS-EEEEEEEEEEE CS
       AIM24  99 atgnveldikfqkgl.kglfggeglflqkltGrGlvalsgyGaiyeielkageelvvdpghlvafsgslkfdiervgglkrrligGeglflkltGpgtv 196
                 +t+++  d k+q g+ k++f+geglf++ ++G+Gl+++s++Gai++++l++ge++ vd+ghlva++ + +++  ++gg+++ + +Gegl++k+tGpgtv
  KHJ32957.1 152 CTQDIVRDYKRQ-GIgKAMFSGEGLFVYNISGNGLLFISSFGAIIRKDLADGEKYLVDNGHLVAWNMKYTLERVSSGGIISNFSSGEGLVCKFTGPGTV 249
                 ************.5679*************************************************66666666669********************** PP

                 EEESS CS
       AIM24 197 llqsr 201
                 +lqsr
  KHJ32957.1 250 FLQSR 254
                 ****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       214  (0.011936); expected 358.6 (0.02)
Passed bias filter:                      189  (0.0105416); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 2032.79
//
Query:       KHJ32958.1  [L=737]
Description: putative exodeoxyribonuclease 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      5e-24   84.7   0.0    1.4e-23   83.3   0.0    1.8  1  XPG_N       XPG N-terminal domain
    1.2e-22   80.0   0.1    4.2e-22   78.3   0.1    2.0  2  XPG_I       XPG I-region
     0.0059   16.1   0.0      0.011   15.3   0.0    1.4  1  XPG_I_2     XPG domain containing
  ------ inclusion threshold ------
      0.062   13.9   0.0       0.24   12.0   0.0    2.0  1  5_3_exonuc  5'-3' exonuclease, C-terminal SAM fold


Domain annotation for each model (and alignments):
>> XPG_N  XPG N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.3   0.0     3e-27   1.4e-23       1     100 [.       1      98 [.       1      99 [. 0.99

  Alignments for each domain:
  == domain 1  score: 83.3 bits;  conditional E-value: 3e-27
                 X--TTHHHHHHHH-GEEEEEGGGGTTEEEEEEHHHHHHHHHHHSE.ETTEE-BS-HHHHHHHHHHHHHHHTTEEEEEEE--S--GGGHHHHHHHHHHHH CS
       XPG_N   1 MGikgLlkllkevaairsvsiealegkklaiDaslwlyrfliavreqlgnalentshlmglfsrllrlldfgikPifVFdgkapdlkkeelekrserrq 99 
                 MGi+gLl+llk ++  +  +++++egk+l++Da+ wl+r ++a++ +l++ + + +++ ++++r+ +l++fg+ P++VFdg+ ++ k+e++++r ++rq
  KHJ32958.1   1 MGISGLLPLLKSIH--KTCHLKNFEGKTLGVDAYGWLHRGAVACAMELATDKPTRKFVDFAMHRVRMLQHFGVIPYLVFDGDNLPSKAETEARRAKKRQ 97 
                 **************..**********************************************************************************9 PP

                 H CS
       XPG_N 100 e 100
                 e
  KHJ32958.1  98 E 98 
                 7 PP

>> XPG_I  XPG I-region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.3   0.1   9.4e-26   4.2e-22       3      94 .]     140     226 ..     138     226 .. 0.87
   2 ?   -3.8   0.0       3.8   1.7e+04      34      54 ..     533     552 ..     522     573 .. 0.64

  Alignments for each domain:
  == domain 1  score: 78.3 bits;  conditional E-value: 9.4e-26
                 HT--EEE-SS-HHHHHHHHHHTTSSSEEE-SSSHHHHTT-SEEEESTT.ECECTT..EEECEEEEEEHHHHHHHHT--HHHHHHHHHHHCET CS
       XPG_I   3 mgipyvvApgEAEAqcayLqkkglvdaviseDsDlllFGapkvlrnlskkkskkkkekekkkvevidlekvlkelgltreqlidlaillgcD 94 
                  g++y+vAp+EA++q++yL++kg+++++iseDsDll+FGa+++l++l   +++++  +e +k +   +++ ++  g+++ +++++ail+gcD
  KHJ32958.1 140 SGVQYIVAPYEADSQMVYLENKGIINGIISEDSDLLVFGAKCLLTKLD--QYGNC--TEINKADFSACRD-INLAGWSDTSFRQMAILSGCD 226
                 69*********************************************8..77777..4445556666644.45569***************9 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 3.8
                 SSHHHHTT-SEEEESTT.ECE CS
       XPG_I  34 DsDlllFGapkvlrnlskkks 54 
                 D Dl +  ++ +l +l  + +
  KHJ32958.1 533 DHDLKVVPCQDILAKLD-QPQ 552
                 66666667777777775.222 PP

>> XPG_I_2  XPG domain containing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   2.4e-06     0.011       5      62 ..     129     182 ..     125     221 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.4e-06
     XPG_I_2   5 mvpavieaLknrwkakditevvpgEADkfcAvlA.rklgcaVLTsDSDLlvhdlgeegs 62 
                 m + +i+ L+   + +++++v p EAD +  +l  +     + ++DSDLlv+  g++  
  KHJ32958.1 129 MASQLIDELR---ISGVQYIVAPYEADSQMVYLEnKGIINGIISEDSDLLVF--GAKCL 182
                 7788999999...89***************99987888899**********9..55554 PP

>> 5_3_exonuc  5'-3' exonuclease, C-terminal SAM fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   5.4e-05      0.24      18      49 ..     226     257 ..     216     298 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 5.4e-05
  5_3_exonuc  18 DnipGvpgiGektAakLlkeygsleeilenld 49 
                 D +  ++ +G ktA +++++y+++e++++ l+
  KHJ32958.1 226 DYLASINNMGLKTAYRMIRKYKNIEKVIQILQ 257
                 6778899********************99654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (737 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.47
# Mc/sec: 4667.56
//
Query:       KHJ32959.1  [L=543]
Description: putative dna replication regulator sld2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.2e-71  240.8  31.8      5e-71  240.6  31.8    1.1  1  Drc1-Sld2  DNA replication and checkpoint protein


Domain annotation for each model (and alignments):
>> Drc1-Sld2  DNA replication and checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.6  31.8   2.8e-75     5e-71       2     446 ..      15     533 ..      14     543 .] 0.75

  Alignments for each domain:
  == domain 1  score: 240.6 bits;  conditional E-value: 2.8e-75
   Drc1-Sld2   2 sqLraelKeWEraFaakn.grkpsreDIKknpeIaakYkeYskLkakesqskkdkkpsksvkleerpkkrkhesteepkeeqkn.nststprkskkaia 98 
                 + Lra+lK+WE++F   n grk+sr DIK+n eIaakYkeY++L++    +++ +++s+ + ++++ + rk++s++ +    +  ++  tp+k+k    
  KHJ32959.1  15 KILRADLKNWEKEFSSRNnGRKASRTDIKQNLEIAAKYKEYNRLRDAL--AHHAPHTSQIKLPQSKVNGRKKDSPKIE---YNYkEKFLTPQKRKIS-- 106
                 579**************99*****************************..4444444444456666666776666444...3444888999999965.. PP

   Drc1-Sld2  99 aTPskshpsevdpydsPsvlrrlfsPstkaalGPTPQrdGkvLgLFDllsespksspskskerkaslsgsav......qtpskrr..aldinaeedrtp 189
                        +    + dsPsv++ lf+P  k++ GPTPQ++G+vLgLFDlls+s ++   + +++  + ++s+v      +tp +++  ++++  +++ tp
  KHJ32959.1 107 -------TEGIGQIDSPSVAKCLFTP-RKVSVGPTPQKEGQVLGLFDLLSDSESNVFRNIQKDV-DPRNSNVitinnqKTPPRSQekKDQTALDKNLTP 196
                 .......78899**************.689*********************9998777776333.3333333478888888777653556666677*** PP

   Drc1-Sld2 190 assgkklllsslfatpttlreaesaknkkdkeasknsssskleseTPsflrrknsarlptvdease..fdlspspl.rkpqrlvgkglsaivqelrdie 285
                 ass k+ +l+ +++++++      ++++ ++  ++  s+skl+++TP flrr+ns++  + d ++    ++sp+ +  +++++  +gls+ +++lr+ +
  KHJ32959.1 197 ASSSKRRRLDAFSTPSKN------SRSEIYQGVTP-LSVSKLNFSTPLFLRRENSTTRQPLDVEDFenYSFSPQKIrCMKRKPPIRGLSSFLADLRESQ 288
                 ************999882......22344445555.5788999***********5555544444434688899988446777778************** PP

   Drc1-Sld2 286 eeklddeldllremEaeeeqaeldd................................................vedsqaseaeeg.......rvrkkkg 329
                 +e+ld el+llre+Ea e +                                                     ++d+ +s+   +        v kkkg
  KHJ32959.1 289 DENLDQELELLREIEADEINMIR-RkpvasataleptpkdaesladhpkisfsqagdndspfcnksamlvksnIKDQPVSQ---NmvddqpsVVYKKKG 383
                 ***************96444333.257888888888888888888888877777777777776666666666633333322...0233555599***** PP

   Drc1-Sld2 330 qkrttRrvkmkPvteeeeededekknsedeldklpetqrkae.........klddel.seredseededsdsdeeseseptakaksfkekakkkkkakk 418
                 qkrttR vkm+P++++ +++  ++++s d + ++ + +   +         +   +l se++ ++ ++ds+s++++++ +t++ +  + k   k   + 
  KHJ32959.1 384 QKRTTRLVKMRPTRSKPPSTMMNTDGSVDYNHRIHQGN---SglvipfqniSATPTLdSEHQARNFNSDSQSEYTASEGETRYYRPNQRKESSK-VHTS 478
                 **************888888888888888888888773...2245777766555566777999*******************998866533222.2223 PP

   Drc1-Sld2 419 kkvkkvst..........................NyrrLKirnkgakgra.kgRf 446
                 +++   s+                          N+rrLK+rn+g+kg     R 
  KHJ32959.1 479 STRVVCSNkesiddrekeqlerasthkvsalslqNFRRLKLRNSGSKGPSaTARN 533
                 3333333356777888888888999*********************985543333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (543 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       800  (0.0446204); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3768.28
//
Query:       KHJ32960.1  [L=285]
Description: putative regulatory protein suaprga1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-69  233.2   4.0    3.8e-69  232.9   4.0    1.1  1  MAM33     Mitochondrial glycoprotein


Domain annotation for each model (and alignments):
>> MAM33  Mitochondrial glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  232.9   4.0   2.1e-73   3.8e-69       1     212 []      70     283 ..      70     283 .. 0.91

  Alignments for each domain:
  == domain 1  score: 232.9 bits;  conditional E-value: 2.1e-73
       MAM33   1 LesEikyekeavkeeeeepesvkeflenggFeiedkpgkeevtLtrkfgdekIrvtfsvadlaneeeeeeeeeeeeedeaeeeeeeeeeeeee.....e 94 
                 L+sE+++e+e +kee ++p+s+k++len++F+i+d+pgkeev Ltr++g+ekI++tfs++d++ ++e + ++ +   +e+e+e ++ee+++ e     +
  KHJ32960.1  70 LNSELQFENE-MKEELTQPTSIKDYLENSPFDIIDEPGKEEVILTRTYGQEKIQITFSISDINMDPEPDMSDRAFGAEEEESESNSEEQKNPEeggeeD 167
                 79********.89999************************************************88877766655555555444444333333688889 PP

       MAM33  95 eesfpvrlsvtiekpgksggaLelectaqdgefvidnvsyykdaelakeetaeadwkrrllyeGPpFenLDedLqellerYLeerGIdeelaefipdys 193
                 ++s+pvrl +++ekpg  +gaL+++ + qd++++id+  +y++ ++a+++t++  ++r++ly GP F+nLDe+Lq l+erYL+erGI+++la f+p+y+
  KHJ32960.1 168 DTSLPVRLHIVVEKPG--KGALAIDSVIQDSMVMIDSCLHYANPAHAHAKTSQLFHERQDLYAGPVFTNLDEELQVLFERYLDERGINTALAIFVPEYI 264
                 9**************5..6******************************************************************************** PP

       MAM33 194 evkEqkeYvrWLenvkkFv 212
                  +kEqkeY rWL+nvk+Fv
  KHJ32960.1 265 NMKEQKEYARWLKNVKEFV 283
                 ******************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2151.55
//
Query:       KHJ32961.1  [L=179]
Description: putative translation machinery-associated protein 16 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-46  156.4   4.8    5.1e-46  156.2   4.8    1.1  1  Tma16     Translation machinery-associated protein 16


Domain annotation for each model (and alignments):
>> Tma16  Translation machinery-associated protein 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.2   4.8   2.8e-50   5.1e-46       2     145 ..      19     163 ..      18     164 .. 0.98

  Alignments for each domain:
  == domain 1  score: 156.2 bits;  conditional E-value: 2.8e-50
       Tma16   2 kkalHpkSRkakqLaraalRdeklakkkkerakkkssllervkffqealde.ekkplsleelkeliekylkRndeeleelkserrkgrpkskreellee 99 
                 ++alH++SR+a++L+ra+ Rd+kl+k++ +r+k +++ller k+fq++++  + k l+ ee++ li+++l++++eel + k++rr+grp s+re+l++ 
  KHJ32961.1  19 NSALHENSRDAQRLRRAQGRDDKLEKMALARRKMDRPLLERAKYFQKSIQLsDGKILEMEEIQTLIKRFLEQFKEELLQCKKQRRPGRPSSAREDLMRL 117
                 789**********************************************9878899******************************************* PP

       Tma16 100 kkereeeeyetGfevpDLtdeenvkllreWngdlsslstlkfiris 145
                 k+++ e+e ++Gf++pDL de+n+ ll++W+g++s+l+tlk++ris
  KHJ32961.1 118 KVAAGEKEHQNGFYMPDLADENNILLLKKWEGSWSYLATLKWVRIS 163
                 *********************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       930  (0.0518713); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1364.56
//
Query:       KHJ32962.1  [L=300]
Description: putative thump domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.6e-09   36.0   0.4    3.5e-08   33.7   0.4    2.1  1  THUMP     THUMP domain


Domain annotation for each model (and alignments):
>> THUMP  THUMP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.4     2e-12   3.5e-08      49     143 ..     186     278 ..     122     279 .. 0.80

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 2e-12
                 TECEEEEEEEEEESSHHHHHHHHH..HHHHHHHHHCT-EEEEEEEESSSTSSSHHHHHHHHHHHHHHCCTT-EE-SSS-SEEEEEEEETTEEEEEEE CS
       THUMP  49 giqrvipvcevceadledileaak..eivkkkfeeeketFaVrvkrrgkhfeftsreinrevGkaivektglkVdlenPdivvrveiikdkayisid 143
                  ++r + v e   ++l++++e+++  e+ +k+ e +  t+a+r + r+++ +  + ++ ++++ +i + +  kV+l++Pd+v++ve+ ++ +++s++
  KHJ32962.1 186 ILSRYFKVNESLSNNLNQLNEKIElkEMQRKNVEHPF-TYAIRPTIRNHN-TLKRDQLIKQIASYISD-FH-KVNLTDPDKVIIVEVYRNICGMSVV 278
                 4566666677888889999998742144555555554.************.*****************.44.6*******************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       998  (0.055664); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2408.85
//
Query:       KHJ32963.1  [L=837]
Description: putative glycosyl hydrolase family 43 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (837 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       961  (0.0536003); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.24s 00:00:00.86 Elapsed: 00:00:00.39
# Mc/sec: 6390.07
//
Query:       KHJ32964.1  [L=466]
Description: putative arginine biosynthesis bifunctional protein argj protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.8e-153  509.1   0.1   6.6e-153  508.9   0.1    1.0  1  ArgJ      ArgJ family


Domain annotation for each model (and alignments):
>> ArgJ  ArgJ family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  508.9   0.1  3.7e-157  6.6e-153       2     376 .]      50     466 .]      49     466 .] 0.94

  Alignments for each domain:
  == domain 1  score: 508.9 bits;  conditional E-value: 3.7e-157
                 EEEEXXSSS.....SXXEEEEEEEEEEEEEEEEEXXSSXXHHHHHHHHHHH.HHS..EEEEEEEEEEXXXSXHHHHHHHHHHHHHHHHHHHTSX....G CS
        ArgJ   2 aagvaagik...kkkkdlalivseepasaaavfTknkvkAapvkvsrevlkkkkg..aravvvnsgnANavtgeqGledaeemaeavaealgik....e 91 
                 ++g+++g+k   k+++dla+++se+ +saaavfTkn+++Aapv++sr+vl+k+++  +r v+vnsg+ANavtg+ G+edae+m +a+++++g +    e
  KHJ32964.1  50 ISGTHIGVKesnKSAPDLAFLTSENLCSAAAVFTKNRFQAAPVTYSRQVLDKRANggIRSVIVNSGCANAVTGKFGMEDAEKMGAAADNCFGHSggsqE 148
                 6899*****764449***********************************9887558**********************************65555437 PP

                 GGEEEEEEEESSXXXXHHHHHHHHHHX....X......HHHHHHHXSSXSSXXEEEEEEEE....TEEEEEEEEEEXSSSXXXXEE--EEEEEE----- CS
        ArgJ  92 eevlvasTGviGerlpmekieagieklvekle......eeaaeAimTTDtvpKlaavevel....gkevtiagiaKGaGmihPnmaTmLafittDaavs 180
                  +++v+sTGviG+rlp++ki++gi++++ +l+       +aa+Ai+TTDt+pKl++++++l    + e++iag+aKGaGmihPnmaT+L++i+tD+a+s
  KHJ32964.1 149 GRTVVMSTGVIGQRLPIDKILNGIPNAYLQLGsshehwLDAAQAICTTDTFPKLLSRKFTLpsspSVEYRIAGMAKGAGMIHPNMATLLGIIATDVAIS 247
                 7***************************99977788889********************99986557******************************** PP

                 HHHHHHHHHHHHHHTGGGB-SSS---SS-EEEEEE--TT......TT.STTHHHHHHHHHHHHHHHHHHHHHTSTT-S-EEEEEEEEESSHHHHHHHHH CS
        ArgJ 181 aealqellkeavdksFnsisvDgdtSTnDtvlllAngaa......eeeeedleefeealtevlqeLakqivrDGEGatklveveVkgakseeeAkkvak 273
                 ++++q ll++a++ksFn+is+DgdtSTnDtv+llAngaa      ++ ++d+++f++ lte++ +Lak +vrDGEGatk+v+++V +++se++A+k+a+
  KHJ32964.1 248 QSLIQPLLNSAIQKSFNCISIDGDTSTNDTVTLLANGAAkgneivSNLSADYDTFQKLLTEFTIDLAKLVVRDGEGATKFVTIRVVESPSEASARKIAS 346
                 **************************************888888655599************************************************* PP

                 HHHT-HHHHHHHHTT---HHHHHHHHHHSSS-...........--TTS-EE........TTEEEEETTEE----HHHHHHHHH-SSEEEEEE--SSSEE CS
        ArgJ 274 svanssLvKtAlfGeDanwGRilaavGyagae...........ldpekvsv......llgevkvlekgepeevdeerakeilkeeeveievdlgegeee 355
                 ++a+s+LvKtAl+G+DanwGRi++a+Gya+++           + pek+sv        +e+k+l++gepe v+e+ra++il++e++ei v+lg+g+e+
  KHJ32964.1 347 TIARSPLVKTALYGNDANWGRIICALGYAQIPepdqpicskgeVVPEKTSVsliptdGSSELKLLNNGEPELVNEDRAAKILQHEDIEILVSLGTGKEQ 445
                 *****************************97778899999999999999998898885578************************************** PP

                 EEEEEE---HHHHHHHTT-XX CS
        ArgJ 356 atvwtcDLsyeYvkiNadYrt 376
                 at+wtcDLs+eYv+iN+dYrt
  KHJ32964.1 446 ATFWTCDLSHEYVTINGDYRT 466
                 ********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (466 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 3450.31
//
Query:       KHJ32965.1  [L=1599]
Description: putative protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-76  257.5   5.8    4.4e-38  131.2   0.0    4.4  4  Pkinase          Protein kinase domain
    3.6e-73  246.3   6.9    3.6e-73  246.3   6.9    2.5  2  HGTP_anticodon2  Anticodon binding domain of tRNAs
    1.1e-46  159.3   0.0    1.3e-18   67.2   0.0    3.5  3  Pkinase_Tyr      Protein tyrosine kinase
    6.3e-12   45.8   2.2    2.4e-11   43.9   0.0    3.0  3  RWD              RWD domain
    2.5e-10   40.2   0.0    7.6e-10   38.5   0.0    1.8  2  tRNA-synt_His    Histidyl-tRNA synthetase
    4.1e-05   23.6   0.0       0.29   11.0   0.0    2.5  2  APH              Phosphotransferase enzyme family
     0.0063   15.9   0.0        2.4    7.4   0.0    2.6  2  Kinase-like      Kinase-like
     0.0075   15.9   2.6      0.087   12.4   0.1    3.6  4  FTA2             Kinetochore Sim4 complex subunit FTA2
  ------ inclusion threshold ------
      0.027   13.8   0.3        1.8    7.8   0.0    2.7  3  Kdo              Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.9      0.14   2.8e+02      19      60 ..     169     212 ..     166     256 .. 0.76
   2 !   81.0   0.1   4.5e-26     9e-23      28     262 ..     311     545 ..     292     547 .. 0.81
   3 !   43.4   0.0   1.3e-14   2.6e-11       2      70 ..     599     665 ..     598     691 .. 0.91
   4 !  131.2   0.0   2.2e-41   4.4e-38      70     260 ..     768     962 ..     731     965 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.14
                 EETTTTEEEEEEEEECHCHCHHHH..HHHHHHHHHHHHHSCTTB CS
     Pkinase  19 veketgkivAvKkikkekakkkke..kkvlrEikilkklkhpni 60 
                 +e++t +  A+Kk ++ek++++k+  +++l+  +i ++l  ++i
  KHJ32965.1 169 IERTTLQDAAIKKAEHEKEREDKQkeQEALEKERIQETLVKDEI 212
                 57889999*******99999888754444444445555545555 PP

  == domain 2  score: 81.0 bits;  conditional E-value: 4.5e-26
                 EEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEE...........SSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHH CS
     Pkinase  28 AvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfee...........kdelylvleyveggeladllerkgslseeeakkiakqilegleyl 114
                 A+ + k++++    + +++ + +++lk+++h+ni++++++  +             ++ +++ey+e+g+l++++   gs+s e++++++ ++l +l+++
  KHJ32965.1 311 AIEIQKNSHKV---QlQSLESDLRLLKNINHQNILQFFDFRVHknseeigeietGWTINILTEYAEKGSLQEFVDIAGSISVERVRSWTIELLDALQFI 406
                 44333333333...247899*******************98887999999998778889****************99********************** PP

                 HHTTEE-SS-SGGGEEEETTTE....EEE-SGTTSEESSSSCS......BCTTTSCGGGS-HHHH..TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSS CS
     Pkinase 115 HskgiiHrDlKpeNiLidekge....lKitDFGlakelesssk......ltsfvgtseYlAPEvl..keneyskkvDvWslGvilyelltgkppfsgek 201
                 H+kgi+H Dl   N+++ ++       K++D    ++++   +      +   + +s++ +PE++  ++ +y +k+D+W  G +++++++g  + +   
  KHJ32965.1 407 HEKGIVHGDLHIGNVMLVRSLSgevrPKLADALYQRRIHDLVDqkqpfnKIPNTKSSYWTPPELIktNQPNYNQKTDIWCFGTLFLQMIFGLSIIN--- 502
                 *****************9644455789****999988887766667765555677899*******7666789*********************999... PP

                 HHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSG CS
     Pkinase 202 gkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhp 262
                        ++               +l e +++s  + +++ k++k d kkR+ a el+++ 
  KHJ32965.1 503 -------DYSS-----------PAALVESTTLSVALNEFVLKMFKTDFKKRPRAVELISSG 545
                 .......2222...........112234567899999999999999999999998887765 PP

  == domain 3  score: 43.4 bits;  conditional E-value: 1.3e-14
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEES CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeek 70 
                 +++ +lG+G+fG+V+ka+++ +g+ +A+Kki ++ +++ +e  vl+E+++l +l+hp +vr++++++e+
  KHJ32965.1 599 VEVGRLGKGGFGEVVKARKRLDGQLYAIKKIVQKPTTSLDE--VLKEVRLLSQLSHPSVVRYFNTWTEE 665
                 56789*****************************9999887..**********************9984 PP

  == domain 4  score: 131.2 bits;  conditional E-value: 2.2e-41
                 SSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS............BCT CS
     Pkinase  70 kdelylvleyveggeladllerkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk............lts 156
                 k  ly+ +ey+e+++l dl++r  + +eee+ +++++ilegl+y+Hs++i+HrDlKpeNi+id   ++Ki+DFGla + +                lt 
  KHJ32965.1 768 KIVLYISMEYCEKQTLRDLIKRGLHENEEEIWRLFREILEGLSYIHSQNIVHRDLKPENIFIDAASNIKIGDFGLAINGQYPLIdisqdvvlysadLTR 866
                 56799****************9999***************************************************9877765578889********** PP

                 TTSCGGGS-HHHH..TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCST CS
     Pkinase 157 fvgtseYlAPEvl..keneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRl 253
                  +gt  Y+APEv   ++ +ys+kvD++s+G+i++e+ + +p+ +g ++ + v   l++   i  i+       + + +  +   +++ +ll+ d  kR+
  KHJ32965.1 867 NIGTAFYVAPEVKssTGGDYSSKVDMFSVGIIFFEM-CFRPLIPGMDRAS-VGCGLRN---INPIF-----PDEFQASERQPQAEIILSLLCHDADKRP 955
                 *************766689*****************.6678888444444.3344444...44444.....44556666777889999*********** PP

                 THHHHHT CS
     Pkinase 254 taeellq 260
                 + +ell+
  KHJ32965.1 956 SSSELLK 962
                 **99997 PP

>> HGTP_anticodon2  Anticodon binding domain of tRNAs
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   4.6      0.63   1.3e+03     119     168 ..     173     222 ..     141     228 .. 0.50
   2 !  246.3   6.9   1.8e-76   3.6e-73       1     263 []    1359    1597 ..    1359    1597 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.63
  HGTP_anticodon2 119 ssaessqkedeassesseeleealaskeerqkevrvlvaatrskksnkre 168
                      ++++++ k++e+++e++++++e++a ++er +e  v+ + tr+k + +++
       KHJ32965.1 173 TLQDAAIKKAEHEKEREDKQKEQEALEKERIQETLVKDEITRQKAKAREK 222
                      22233333333333233333344455566777777777777777444433 PP

  == domain 2  score: 246.3 bits;  conditional E-value: 1.8e-76
  HGTP_anticodon2    1 WkpkRcDVlVasfdksiLrtsgvellqeLWahnIsAdlaldasksleelvskarddgvswiviikqqnkskskekplkvkslekke..dvdl 90  
                       W+++RcDVlVas+d  iLrt+g+ +lq LW+ +IsA+la+d++ s e+l+sk+rdd++swi+iikq    +s    lkvks+ +k+  d+d+
       KHJ32965.1 1359 WNNRRCDVLVASHDTIILRTVGITILQMLWSYSISAELARDSH-SSEDLLSKYRDDQHSWIIIIKQ----DSV---LKVKSMVRKDakDIDI 1442
                       9*************************************87777.**********************....677...********9999**** PP

  HGTP_anticodon2   91 dldelvswlkqeirerekereesaksskssaessqkedeassesseeleealaskeerqkevrvlvaatrskksnkrekveqddAqeaaael 182 
                       + d+lvs+lk+e+rer+ ++ ++++++k      q++++ s+                +++v +l++ t+skksn+r+++eq  Aq+ a +l
       KHJ32965.1 1443 SPDQLVSFLKTEMRERD-RKYGTHQREK-----LQQMSNVSE-------------VGCNQDVMILISGTKSKKSNRRNIIEQ--AQACALSL 1513
                       ****************9.4444333332.....233323322.............23689**********************..******** PP

  HGTP_anticodon2  183 vksllngpiaaidtrdevlemisetsLsdkdeWrkviqsvntaersyateihnaLskeaakgkk...wailynfrtgkcilydL 263 
                       ++++l gpiaai+++d+v+e i++t+Ls+++ Wr + q v+ aer+y+ e++ +L k ++++ +    a++ynfr+gkci+ydL
       KHJ32965.1 1514 THEMLRGPIAAIEITDQVMENIKSTKLSEPETWRSLSQVVPMAERKYLGEVQSMLLKIKEQNINvtrYAFIYNFRSGKCIFYDL 1597
                       ********************************************************55555433334****************9 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.2   0.0   6.6e-22   1.3e-18      31     199 ..     310     495 ..     293     543 .. 0.83
   2 !   21.2   0.0   7.1e-08   0.00014       6      71 ..     603     663 ..     599     670 .. 0.88
   3 !   66.4   0.0   1.1e-21   2.3e-18      75     218 ..     770     920 ..     760     963 .. 0.70

  Alignments for each domain:
  == domain 1  score: 67.2 bits;  conditional E-value: 6.6e-22
                  EEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSS...........EEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHH CS
  Pkinase_Tyr  31 VavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeep...........llivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGme 117
                   a+ + k ++++ + ++l ++++++k+++h+ni+++  + +++++           + i+tey+++G+L++f+      +++++++ s+++++ ++++
   KHJ32965.1 310 LAIEIQK-NSHKVQLQSLESDLRLLKNINHQNILQFFDFRVHKNSeeigeietgwtINILTEYAEKGSLQEFVDIA--GSISVERVRSWTIELLDALQ 404
                  5665555.4555569**********************999944444688899999999****************98..9******************* PP

                  HHHHTTEEEST-SGGGEEEEE....TTEEEE-STTTHEETTTSSEE...EETTSSTSGGGGS-HHHHHHSE..EEHHHHHHHHHHHHHHHH CS
  Pkinase_Tyr 118 yLeskklvHrdlaarNvLlse....nkvvkisDfGLardiekddey...vkkeeaklpvkWmapEslkekk..ftsksDvWsfGvllwEif 199
                  ++++k +vH dl   Nv+l +    +   k++D    r+i++  ++    +k  ++ +  W++pE +k+++  +++k+D+W+fG+l   ++
   KHJ32965.1 405 FIHEKGIVHGDLHIGNVMLVRslsgEVRPKLADALYQRRIHDLVDQkqpFNKIPNTKSSYWTPPELIKTNQpnYNQKTDIWCFGTLFLQMI 495
                  ******************998676566789***999999933222211244444555678*********9999************987765 PP

  == domain 2  score: 21.2 bits;  conditional E-value: 7.1e-08
                  EEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE CS
  Pkinase_Tyr   6 klGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvct 71 
                  +lG+G fG+Vv+++ +     + +  a+K++ ++ t +  +e+l+e++++++l+hp +v++    t
   KHJ32965.1 603 RLGKGGFGEVVKARKR----LDGQLYAIKKIVQKPTTS-LDEVLKEVRLLSQLSHPSVVRYFNTWT 663
                  69***********999....777889999998877777.99*******************988776 PP

  == domain 3  score: 66.4 bits;  conditional E-value: 1.1e-21
                  SEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEE.......TTTSSEE..EETT CS
  Pkinase_Tyr  75 pllivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLard.......iekddey..vkke 163
                   l+i +ey+++ +L++ +++    + + +++ ++  ++ +G++y++s+++vHrdl   N++++  + +ki+DfGLa +       i++d      + +
   KHJ32965.1 770 VLYISMEYCEKQTLRDLIKRG--LHENEEEIWRLFREILEGLSYIHSQNIVHRDLKPENIFIDAASNIKIGDFGLAINgqyplidISQDVVLysADLT 865
                  47999*************997..7888999*********************************************97622221113333333222333 PP

                  SSTSGGGGS-HHHHHHSE..EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHH CS
  Pkinase_Tyr 164 eaklpvkWmapEslkekk..ftsksDvWsfGvllwEiftlgespypglkneevlekl 218
                  ++     ++apE+ +++   ++sk D++s G++ +E++      +pg++ ++v   l
   KHJ32965.1 866 RNIGTAFYVAPEVKSSTGgdYSSKVDMFSVGIIFFEMCFR--PLIPGMDRASVGCGL 920
                  444677899***98776566*****************984..344555555554444 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.9   0.0   1.2e-14   2.4e-11       1     110 [.      41     145 ..      41     149 .. 0.84
   2 ?   -1.6   0.2       1.6   3.2e+03      33      67 ..     691     718 ..     664     777 .. 0.67
   3 ?   -1.3   0.0       1.3   2.5e+03      12      42 ..     925     950 ..     921    1006 .. 0.67

  Alignments for each domain:
  == domain 1  score: 43.9 bits;  conditional E-value: 1.2e-14
                 HHHHHHHHHHHHHSTTTCCCCH..T--EE--S-EEEEEEECECCCC....TT-CEEEEEEEEE-SSTTSS--EEEEEECCSS-HHHHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD   1 eeqeqEleaLesIypdefevie..nenysikleikikldededeedsefeekkkpslkleiklpeeYPeeaPiislsstenlpkeqvksleekleelae 97 
                 e q +El aL++Iy+d+f++i+  +  ++ k e  +++   +++e        +  ++l ++++++YP+++Pi+sl+   +l++  ++ l + +e++  
  KHJ32965.1  41 EIQGDELIALAAIYGDDFKRISssRGAWN-KSEPCFEIRIRSSNE--------DIAVTLLVSFTPSYPKTPPILSLKDGTGLKEVTKAALLRIIEKKPL 130
                 6799******************9955666.555566666665554........699************************9999999999999988888 PP

                 HT..TTS--CHHHHH CS
                 xx..xxxxxxxxxxx RF
         RWD  98 en..lgepvifalid 110
                 e     +++++++++
  KHJ32965.1 131 ELvaEEQAMVMEIVN 145
                 888888999998886 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.6
                 EEEEEECECCCC....TT-CEEEEEEEEE-SSTTS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD  33 kikldededeedsefeekkkpslkleiklpeeYPe 67 
                 + ++++++        e +++++ l++  +++YP+
  KHJ32965.1 691 SMPINSSS-------IECCDNTVGLDFMSSNNYPQ 718
                 33333333.......44567888888888888882 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 1.3
                 HHSTTTCCCCHT--EE--S-EEEEEEECECC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD  12 sIypdefevienenysikleikikldedede 42 
                  I+pdef+  e +++++++ +++       +
  KHJ32965.1 925 PIFPDEFQASE-RQPQAEIILSLLC----HD 950
                 59*****8888.6666333333332....22 PP

>> tRNA-synt_His  Histidyl-tRNA synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   0.0       4.3   8.6e+03     136     175 ..     404     440 ..     397     447 .. 0.70
   2 !   38.5   0.0   3.8e-13   7.6e-10      17     309 ..    1030    1336 ..    1021    1337 .. 0.78

  Alignments for each domain:
  == domain 1  score: -4.3 bits;  conditional E-value: 4.3
                    HHHHHHCTSSSEEEEEEETCHHHHHHHHTT--HHHHHHHH CS
  tRNA-synt_His 136 ealeaaagvkelrldlghvglvralleaaglsesleeall 175
                    + ++   g+ +  l +g+v lvr+l  ++  +++l++al+
     KHJ32965.1 404 QFIH-EKGIVHGDLHIGNVMLVRSLSGEV--RPKLADALY 440
                    4453.56777888999*******997764..466666655 PP

  == domain 2  score: 38.5 bits;  conditional E-value: 3.8e-13
                     HHHHHHHHHHTT-EEEE--SEEEHHHHCTTSTCC.HHHS-EEE-TTSSEEEE-SSSHHHHHHHHHHHHHTSS-EEEEEEEEEEESS-SSTT--C CS
  tRNA-synt_His   17 rrrlldlfeswGYelVspPllEyldslltgaged.ldqtfklvDqsgrllglRaDiTpqvaRiaahrlnrerplRlcYaGsvlrtrpdglgrsr 109 
                     r+rl+++f+++G        +E ++++l  ++++  +++++l   +g  l l  D+T   aR+ a++   +   R   +G+v+r r++g g+ +
     KHJ32965.1 1030 RQRLVEIFRRHG-------AIETTRTILFPRSSHyGSNSMQLLERNGTILQLPYDLTLPFARAIAKH---PFYERSFTFGQVFRDRETG-GQPQ 1112
                     666666666665.......78888887777655515589****99********************95...899**************98.9999 PP

                     CEEEEEEEEESS-SHH...HHHHHHHHHHHHHHHH...CTSSSEEEEEEETCHHHHHHHHTT--HHHHHHHHHHHHCT-HHHHHHHHHCCTTH. CS
  tRNA-synt_His  110 eplQvGaEliGaegle...adlEvlslllealeaa...agvkelrldlghvglvralleaaglsesleeallaalarkdlaelkelaaeaglk. 196 
                     ++  +   ++ +++ +   +++Ev+++l e++  +   ++ +++ + ++h +l+  +++ + +++s ++ + + l++ ++++ +    + +lk 
     KHJ32965.1 1113 TFGEADFDIVSTDSSDftlKEAEVIKVLDEIVG-SfpsLSASKMCFHINHSDLLGYVFDFCRIDPSIRNIVANTLSKLNIQSWTWQKIQLELKs 1205
                     **********99987633379*********995.52336679**************************************99765555555557 PP

                     ......HHCCHCC...HCCHCCCHHHHCHCCHCTH....HHHHHHHHHHHHHHHHHHHHHHH-TTEEE-TT--TTTTT--SEEEEEEETT.-SS CS
  tRNA-synt_His  197 ......ealrellkalelygdaevleealealaaa....palqaaldeleelaallealakpevrvtlDlaelrgyeYytGlvFaayaeg.vgq 279 
                           ++ ++ l+ ++ + +++   ++l+ l +     +++++a+++l+e+  + ++++ ++  +   l+ l +  Y  Gl F++  +   ++
     KHJ32965.1 1206 pliglsTPSVDDLQRFNFRDTPTLAFQKLKILFEGtniyEKATSAITHLQEVLLYTKRFEIKNTIYITPLGSLNEKFYKGGLLFSCLFDRkIKD 1299
                     7888887778888888555555555455555555422224566777777777777777754666666778999999999******977651667 PP

                     -SEEEEEECTTTGGG.T-......--EEEEEEEEHHH CS
  tRNA-synt_His  280 aiarGGrYdelgaaf.gr......arpAtGfsldlea 309 
                      +a GGrYd l+++  ++      +r A+Gf l  e+
     KHJ32965.1 1300 VFAAGGRYDSLIQEHsNKannriaPRYAVGFNLAWEK 1336
                     99************954467778788*****998776 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   0.00014      0.29     152     180 ..     392     423 ..     372     431 .. 0.79
   2 !    9.8   0.0   0.00035       0.7     136     199 ..     786     846 ..     771     873 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00014
                 HHHHHHHH--S...SS-EEEE-SS-SGGGEEE CS
         APH 152 vlaalaallpg...elptvllHgDlhpgNllv 180
                 v+ +  +ll++     +++++HgDlh gN+++
  KHJ32965.1 392 VRSWTIELLDAlqfIHEKGIVHGDLHIGNVML 423
                 444555555555456899*************7 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00035
                 CCGCCTCCHHHHHHHHHHHHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEE CS
         APH 136 llaselldlleeleeqvlaalaallpgelptvllHgDlhpgNllvdpddgrvtGviDfedaglg 199
                 l+++ l++  ee+++ + +++++ l    ++ ++H+Dl+p N+ +d++ +    + Df++a  g
  KHJ32965.1 786 LIKRGLHENEEEIWR-LFREILEGLSYIHSQNIVHRDLKPENIFIDAASNIK--IGDFGLAING 846
                 444444554456666.5555555555567899**************444443..6677777665 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.0    0.0046       9.2     150     241 ..     396     492 ..     378     533 .. 0.76
   2 !    7.4   0.0    0.0012       2.4     157     189 ..     809     841 ..     764     908 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0046
  Kinase-like 150 TlqlirlaanLqakglvhgkftvdnllldek..gglmlggftaLvr......agtkvvlseve....kgfaPpEllgsrggytrknktkmthkldaWq 235
                  T++l+   + +++kg+vhg+++  n++l +   g +  +  +aL++      + +k + ++++      + PpEl+         n+ ++  k+d W 
   KHJ32965.1 396 TIELLDALQFIHEKGIVHGDLHIGNVMLVRSlsGEVRPKLADALYQrrihdlVDQKQPFNKIPntksSYWTPPELIKT-------NQPNYNQKTDIWC 486
                  7888888899999*************9988532666544555666511222223445555555555466899999988.......7778888999998 PP

  Kinase-like 236 lGlviy 241
                   G   +
   KHJ32965.1 487 FGTLFL 492
                  887655 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0012
  Kinase-like 157 aanLqakglvhgkftvdnllldekgglmlggft 189
                    +++++ +vh +++++n++ d    +++g+f+
   KHJ32965.1 809 LSYIHSQNIVHRDLKPENIFIDAASNIKIGDFG 841
                  56899******************9999999986 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       2.3   4.6e+03     155     196 ..     307     344 ..     281     351 .. 0.74
   2 ?   -0.8   0.0      0.49   9.7e+02     178     203 ..     396     421 ..     378     423 .. 0.84
   3 ?   -0.1   0.0       0.3     6e+02      27      52 ..     601     628 ..     590     660 .. 0.76
   4 !   12.4   0.1   4.4e-05     0.087     140     204 ..     763     828 ..     734     844 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 2.3
        FTA2 155 rpiraIVKelellkeqeelevsqlpkllrdlkklhklgIvvr 196
                 + i+aI    e++k++++++ ++l+  lr lk+++ + I+++
  KHJ32965.1 307 QTILAI----EIQKNSHKVQLQSLESDLRLLKNINHQNILQF 344
                 334444....58999999999999999999999988888763 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.49
        FTA2 178 lpkllrdlkklhklgIvvrDlkeeny 203
                 + +ll+ l+ +h+ gIv+ Dl+  n+
  KHJ32965.1 396 TIELLDALQFIHEKGIVHGDLHIGNV 421
                 5579999**************98775 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.3
        FTA2  27 leyLgkglhsiVlkvk..irgkeYALKl 52 
                 +  Lgkg  + V+k++   +g+ YA+K 
  KHJ32965.1 601 VGRLGKGGFGEVVKARkrLDGQLYAIKK 628
                 45689999999**996337899****93 PP

  == domain 4  score: 12.4 bits;  conditional E-value: 4.4e-05
        FTA2 140 t..e.drsralgeedgkkrpiraIVKelellkeqeelevsqlpkllrdlkklhklgIvvrDlkeenyi 204
                    + +   ++++e+ +k+ +r ++K    l+e+ee + + ++++l+ l  +h++ Iv+rDlk+en+ 
  KHJ32965.1 763 SnrIkKIVLYISMEYCEKQTLRDLIKR--GLHENEEEIWRLFREILEGLSYIHSQNIVHRDLKPENIF 828
                 222134556788888899999999999..8999999999*************************9975 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.029        59     125     153 ..     397     425 ..     354     438 .. 0.65
   2 ?   -3.4   0.1       2.6   5.1e+03     164     179 ..     752     767 ..     748     770 .. 0.86
   3 ?    7.8   0.0   0.00092       1.8     126     155 ..     804     833 ..     775     842 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.029
         Kdo 125 kavgrliaklhragvnHadlyaknillqq 153
                  ++  + + +h+ g+ H+dl + n++l  
  KHJ32965.1 397 IELLDALQFIHEKGIVHGDLHIGNVMLVR 425
                 4455566779**************98855 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.6
         Kdo 164 iDldkarlrlradrwr 179
                 +Dld++r +++ +r +
  KHJ32965.1 752 LDLDRSRYKTQSNRIK 767
                 7********9988866 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.00092
         Kdo 126 avgrliaklhragvnHadlyaknillqqee 155
                 ++    + +h+ ++ H+dl + ni+++++ 
  KHJ32965.1 804 EILEGLSYIHSQNIVHRDLKPENIFIDAAS 833
                 555566779*****************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1599 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1530  (0.0853366); expected 358.6 (0.02)
Passed bias filter:                      627  (0.0349713); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 1.09u 0.28s 00:00:01.37 Elapsed: 00:00:00.45
# Mc/sec: 10738.26
//
Query:       KHJ32966.1  [L=395]
Description: putative pre-mrna splicing factor cwc2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.2e-44  149.4   0.8    1.1e-43  148.4   0.0    1.9  2  Torus        Torus domain
    1.2e-08   34.7   0.0    2.7e-08   33.5   0.0    1.7  1  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
    4.6e-05   23.3   0.4    0.00012   22.0   0.4    1.8  1  zf_CCCH_4    Zinc finger domain
     0.0013   18.7   0.0     0.0028   17.6   0.0    1.5  1  Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
  ------ inclusion threshold ------
      0.025   14.5   0.7      0.044   13.7   0.7    1.4  1  zf-CCCH      Zinc finger C-x8-C-x5-C-x3-H type (and similar)


Domain annotation for each model (and alignments):
>> Torus  Torus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.4   0.0     3e-47   1.1e-43       2     109 .]      50     157 ..      49     157 .. 0.99
   2 ?   -2.0   0.2       1.7     6e+03       6      35 ..     225     253 ..     221     277 .. 0.48

  Alignments for each domain:
  == domain 1  score: 148.4 bits;  conditional E-value: 3e-47
                 XXX----S-SS--------SSS-----TTSS----S-THHHHS-----S----HHHH----HHHHSTT--B-HHHHHT--SSGGG-SSB-S---SS--- CS
       Torus   2 kkrparkqvdeeelksekeeqegeeyNiWynkwsgeekekkkkskekaktrcnikkdsGytkadkekesyfClfFarGlCakGkkCeylHrlPteedlk 100
                 kkrpar qvd++++kse ++q+g+ +NiWynkwsg+++e+k+ s+++a  rc +++dsGytkadk ++syfClfFarG+C+kG++CeylHrlP  +d++
  KHJ32966.1  50 KKRPARPQVDPSTMKSEPPPQTGTIFNIWYNKWSGGDREDKYLSQTAAIGRCIVAQDSGYTKADKVNGSYFCLFFARGVCPKGQECEYLHRLPGIHDMF 148
                 89************************************************************************************************* PP

                 -TTB-TTS- CS
       Torus 101 ekkvDiFGR 109
                 + ++D+FGR
  KHJ32966.1 149 NPNIDVFGR 157
                 ********9 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.7
                 ---S-SS--------SSS-----TTSS--- CS
       Torus   6 arkqvdeeelksekeeqegeeyNiWynkws 35 
                 a  q  +e +++++  ++ e  N+ ++   
  KHJ32966.1 225 ANAQFAKEAMAHQSLDHN-EILNVRWATAD 253
                 666665555544444333.35555444333 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.0   7.4e-12   2.7e-08      12      69 ..     192     244 ..     180     245 .. 0.90

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 7.4e-12
                 HHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  12 eeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ee + ++F ++G+i++i++ ++     +g+af+++ ++ +A+ A+ea+ ++ l+++e+
  KHJ32966.1 192 EEVVARHFAEWGQIERIRVLNT-----RGVAFITYSNEANAQFAKEAMAHQSLDHNEI 244
                 677889***************6.....***************************9998 PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.4   3.3e-08   0.00012       1      19 []     121     139 ..     121     139 .. 0.98

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 3.3e-08
   zf_CCCH_4   1 CkfflqGtCkkGdkCrFaH 19 
                 C ff++G C+kG  C ++H
  KHJ32966.1 121 CLFFARGVCPKGQECEYLH 139
                 99***************** PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   7.7e-07    0.0028      12      52 ..     189     230 ..     187     230 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 7.7e-07
  Nup35_RRM_2  12 elielVle.hFasfGeIvkhyvpkevsvmyvkfesekdaekA 52 
                  ++ie+V + hFa+ G+I ++ v + + v+++++ +e +a+ A
   KHJ32966.1 189 DDIEEVVArHFAEWGQIERIRVLNTRGVAFITYSNEANAQFA 230
                  556555555***************************999865 PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.7   1.2e-05     0.044       6      25 ..     121     139 ..     121     141 .. 0.95

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.2e-05
                 BCHHHHHS--TTGGG-SSBS CS
     zf-CCCH   6 CrffmrtGyCkyGdrCkFaH 25 
                 C ff+r G C+ G  C + H
  KHJ32966.1 121 CLFFAR-GVCPKGQECEYLH 139
                 889999.************* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       784  (0.043728); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2830.15
//
Query:       KHJ32967.1  [L=471]
Description: hypothetical protein EV44_g2120 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (471 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       681  (0.0379832); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3333.30
//
Query:       KHJ32968.1  [L=571]
Description: putative acyl- n-acyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-06   27.3   0.0    6.6e-06   26.3   0.0    1.4  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    6.4e-05   23.3   0.0    0.00012   22.4   0.0    1.4  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
    0.00034   20.5   0.0    0.00065   19.6   0.0    1.4  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
      0.084   12.3   0.2       0.15   11.5   0.2    1.4  1  Acetyltransf_15  Putative acetyl-transferase


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.0   1.5e-09   6.6e-06      41     112 ..     416     492 ..     392     495 .. 0.75

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 1.5e-09
                     TTEEEEEE..........EEEEEETTSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHT.TESEEEEEEETTEHHHHHHH CS
  Acetyltransf_1  41 dgeliGfi..........sllkipdekggvayieslaVspeyrgkGlGsaLlealeeraree.gikkivlaveedndaairlY 112
                     + ++iGf+          +l+k      + + +++l+V+ ey+gkG+G+ Ll+ l++ +    g+kk  ++  ++n  + ++Y
      KHJ32968.1 416 NKNVIGFAfnerfnygfsGLSKGRS---RFTTTIQLFVAQEYQGKGVGRNLLDRLIHMLSTAyGYKK-ACEFINPN--SDKVY 492
                     4557888866655554434444444...888999***********************7777799999.67555555..77777 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   2.7e-08   0.00012      12      48 ..     417     467 ..     404     496 .. 0.65

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 2.7e-08
                     TEEEEEEEEEEES.............TCTEEEEE-GGGTTSSHHHHHHH.H CS
  Acetyltransf_7  12 gkivGfialslld.............aeitrlaVdpeyrgkGiGraLle.a 48 
                     ++++Gf+  ++ +             +  + l+V++ey+gkG+Gr Ll+ +
      KHJ32968.1 417 KNVIGFAFNERFNygfsglskgrsrfTTTIQLFVAQEYQGKGVGRNLLDrL 467
                     4566666555555666665555565444455*****************943 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   1.5e-07   0.00065      54      83 ..     445     474 ..     399     494 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 1.5e-07
  Acetyltransf_10  54 isllfVdpeyrgqGigkaLleaveeeaekd 83 
                         lfV++ey+g+G+g++Ll+++++ ++++
       KHJ32968.1 445 TIQLFVAQEYQGKGVGRNLLDRLIHMLSTA 474
                      4579********************997654 PP

>> Acetyltransf_15  Putative acetyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   3.3e-05      0.15      69     109 ..     439     479 ..     343     495 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.3e-05
  Acetyltransf_15  69 eknvleiYtlyvsekyrgkGlakklLeeslkelkknYkvdn 109
                      ++ +    +l+v ++y+gkG+ ++lL + ++ l   Y +++
       KHJ32968.1 439 RSRFTTTIQLFVAQEYQGKGVGRNLLDRLIHMLSTAYGYKK 479
                      4555555689************************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (571 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 4299.29
//
Query:       KHJ32969.1  [L=267]
Description: hypothetical protein EV44_g3591 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       814  (0.0454013); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.19s 00:00:00.63 Elapsed: 00:00:00.35
# Mc/sec: 2278.64
//
Query:       KHJ32970.1  [L=158]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.062   12.8   0.0      0.087   12.3   0.0    1.2  1  Casc1     Cancer susceptibility candidate 1
       0.12   10.9   0.0       0.15   10.6   0.0    1.0  1  FUSC      Fusaric acid resistance protein family


Domain annotation for each model (and alignments):
>> Casc1  Cancer susceptibility candidate 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   9.7e-06     0.087      40      93 ..      29      79 ..      14      98 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 9.7e-06
       Casc1 40 ivDiedslireWllqldieneiifsletklvryelyiskkeeeeakaargyvtd 93
                i  i +  +r W ++l +  +ii+s++++l+++++ i+   +eea+a+++y  +
  KHJ32970.1 29 IIAIRQRRERAWHARLLVCTTIISSIDSALANLQDEIE---KEEAVAFKAYLRQ 79
                33445567899***************************...5889999998766 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   1.7e-05      0.15     217     266 ..      33      83 ..      28     105 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 1.7e-05
        FUSC 217 raralrrllsrmlallallsslarllarlraeeaaavpe.laallaelaal 266
                 r r+ r+ ++r+l +++++ss+ + la+l++e +++++  ++a+l+++ a 
  KHJ32970.1  33 RQRRERAWHARLLVCTTIISSIDSALANLQDEIEKEEAVaFKAYLRQVIAS 83 
                 6788999*************************9999877899999988873 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1154.34
//
Query:       KHJ32971.1  [L=132]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       425  (0.0237046); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1041.15
//
Query:       KHJ32972.1  [L=215]
Description: putative zinc mynd-type domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-08   34.7  14.4    2.7e-08   33.8  14.4    1.5  1  zf-MYND   MYND finger


Domain annotation for each model (and alignments):
>> zf-MYND  MYND finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8  14.4   1.5e-12   2.7e-08       1      38 []     155     197 ..     148     197 .. 0.86

  Alignments for each domain:
  == domain 1  score: 33.8 bits;  conditional E-value: 1.5e-12
                 -TTT--....B-SCE-TTTS-SEESSHHHHHHCH..HHHCCCH CS
     zf-MYND   1 CavCgk...aealkkCagCksvfYCskeCqradw..ksHkteC 38 
                 C+ C      ++lk C+gC +++YC k+Cq +dw  k Hk+eC
  KHJ32972.1 155 CRACAAqakPDKLKACSGCDAAWYCQKDCQIKDWneKGHKKEC 197
                 88888875456666********************6556***** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1736.23
//
Query:       KHJ32973.1  [L=149]
Description: putative ubiquitin conjugating enzyme [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.7e-48  162.1   0.0    6.3e-48  162.0   0.0    1.0  1  UQ_con     Ubiquitin-conjugating enzyme
    0.00052   19.7   0.0    0.00067   19.4   0.0    1.2  1  Prok-E2_B  Prokaryotic E2 family B
  ------ inclusion threshold ------
      0.019   14.8   0.1      0.036   13.9   0.1    1.5  1  UEV        UEV domain
      0.053   13.8   0.2      0.065   13.5   0.2    1.5  1  RWD        RWD domain


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.0   0.0   1.4e-51   6.3e-48       1     138 [.       6     141 ..       6     143 .. 0.96

  Alignments for each domain:
  == domain 1  score: 162.0 bits;  conditional E-value: 1.4e-51
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGGGSTTT--TTSHHHH CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldiLkeekWspaltles 99 
                 r+ ke ++l+ ++ +gisa++ +d nl  ++v i+gp+++pYegg+Fklel +p+dYP++pPk++f tki+HPn+dk G++cld+Lk++ Wspal++++
  KHJ32973.1   6 RIIKETERLNAEPVPGISASPHED-NLRYFDVSIHGPNQSPYEGGIFKLELFLPDDYPMTPPKIRFLTKIYHPNIDKLGRICLDVLKSN-WSPALQIRT 102
                 7899*******************8.**************************************************************55.********* PP

                 HHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHH CS
      UQ_con 100 vllsiqsLlaepnpesplnkeaakllkkdreeykkkvke 138
                 +llsiq+Ll  pnp++pl  e+ak++k+++++  ++++e
  KHJ32973.1 103 ILLSIQALLGAPNPDDPLAPEVAKKWKENEQAAIATARE 141
                 *****************************9887777665 PP

>> Prok-E2_B  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   1.5e-07   0.00067      34     128 ..      47     131 ..      16     138 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.5e-07
   Prok-E2_B  34 sggtvdlrlvypdsfpllppavflqdpeqlkllpHintfg.gaLClleeeldldewdpngsvadvleqlqqvLn.egisgdedaefagEfqsYwese 128
                 +gg+++l+l +pd++p  pp+++          +H n ++ g +Cl        +w p+  ++ +l ++q++L   ++ +      a E+++ w++ 
  KHJ32973.1  47 EGGIFKLELFLPDDYPMTPPKIRFLTKI-----YHPNIDKlGRICL---DVLKSNWSPALQIRTILLSIQALLGaPNPDDPL----APEVAKKWKEN 131
                 89********************875443.....788885579****...788889999999999999999999866666655....55555555554 PP

>> UEV  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1   8.1e-06     0.036      41     118 ..      44     117 ..      26     120 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.1e-06
                 -SSSTTS-EEEEEEE--TTTTTS--EEEE-GCC--TSGGGGGB-TTSBB--HHHH.S--T..TT--HHHHHHHHHH----- CS
         UEV  41 vkykgatyniPiliwvlesyPveaPivyvkptksmvikknenvdaqGlvylpyLe.eWkr..eksnlvslvqelaqafeee 118
                   y+g +++  ++++++++yP+++P +    +       + n+d+ G++ l++L+ +W++  +  +++  +q l  a + +
  KHJ32973.1  44 SPYEGGIFK--LELFLPDDYPMTPPKIRFLTKI-----YHPNIDKLGRICLDVLKsNWSPalQIRTILLSIQALLGAPNPD 117
                 555555544..6899**********87554332.....3459************736888544444666666666565555 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.2   1.4e-05     0.065      52      78 ..      48      74 ..       7     145 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.4e-05
                CEEEEEEEEE-SSTTSS--EEEEEECC CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD 52 kpslkleiklpeeYPeeaPiislsste 78
                   +kle  lp +YP ++P+i++ ++ 
  KHJ32973.1 48 GGIFKLELFLPDDYPMTPPKIRFLTKI 74
                55799****************998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       269  (0.0150036); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1115.86
//
Query:       KHJ32974.1  [L=1117]
Description: putative elongation factor 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-47  161.5   0.2    3.5e-25   89.1   0.0    4.2  3  ABC_tran      ABC transporter
    1.1e-13   51.2   0.0      3e-05   23.6   0.0    3.5  3  SMC_N         RecF/RecN/SMC N terminal domain
    5.5e-13   49.4  11.1     0.0004   20.3   0.0    4.9  5  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
    2.8e-09   37.8   1.1     0.0003   21.4   0.0    2.8  2  AAA_23        AAA domain
    2.6e-07   30.3   1.4     0.0039   16.9   0.4    2.6  2  AAA_29        P-loop containing region of AAA domain
    1.6e-06   27.9   0.4    3.2e-06   26.9   0.4    1.5  1  Chromo        Chromo (CHRromatin Organisation MOdifier) domai
      4e-06   26.9   0.0      0.033   14.3   0.0    2.9  2  MMR_HSR1      50S ribosome-binding GTPase
    5.1e-06   26.5   0.4      0.038   13.9   0.1    2.5  2  RsgA_GTPase   RsgA GTPase
      5e-05   23.2   0.5      0.082   12.6   0.4    2.8  2  AAA_15        AAA ATPase domain
     0.0012   19.1   0.0      0.049   13.9   0.0    2.6  2  AAA_28        AAA domain
     0.0018   18.5   0.3        3.2    8.0   0.1    3.1  2  AAA_22        AAA domain
  ------ inclusion threshold ------
      0.013   16.0   0.3        4.5    7.8   0.0    3.2  3  AAA_18        AAA domain
      0.017   15.1   0.7        1.5    8.7   0.0    2.9  2  NACHT         NACHT domain
      0.017   13.8   0.0        5.1    5.6   0.0    2.5  2  AAA_13        AAA domain
      0.023   13.7   0.9          6    5.8   0.0    2.7  2  MeaB          Methylmalonyl Co-A mutase-associated GTPase Mea
      0.027   14.7   0.0          4    7.6   0.0    2.7  2  AAA_33        AAA domain
      0.027   14.5   0.0        1.3    9.1   0.0    2.8  3  Dynamin_N     Dynamin family
      0.035   14.2   3.2       0.41   10.7   0.2    3.3  4  DUF87         Helicase HerA, central domain
      0.098   10.2   2.8        1.7    6.1   0.3    2.2  2  DUF3584       Protein of unknown function (DUF3584)
       0.15   12.5   0.1         26    5.3   0.0    2.7  2  RNA_helicase  RNA helicase
       0.15   11.8   1.0        6.1    6.5   0.3    2.5  2  AAA_24        AAA domain
       0.15   11.8   2.3        9.5    5.9   0.1    3.1  2  AAA_30        AAA domain


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.3   1.5e-08   1.2e-05       2      33 ..     500     531 ..     499     536 .. 0.90
   2 !   41.0   0.0   3.2e-13   2.6e-10      80     137 .]     573     630 ..     542     630 .. 0.84
   3 !   89.1   0.0   4.3e-28   3.5e-25       1     137 []     744     975 ..     744     975 .. 0.77

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 1.5e-08
                 EEEEEEEETTSEEEEEESTTSSHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   2 knvslklkegekvaivGenGaGKStLlkllag 33 
                 ++ +l l +g+++++ G+nGaGKStLl+ +a 
  KHJ32974.1 500 SHTNLRLLKGHRYGLCGRNGAGKSTLLRSIAT 531
                 6779999*********************9985 PP

  == domain 2  score: 41.0 bits;  conditional E-value: 3.2e-13
                 HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  80 esdeeiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                 + +++i+++ls++g +  +  +++++  sLSgG+k ++alara+l k+++lllDEpt+
  KHJ32974.1 573 AGRARISEVLSEVGFTSGPSGRQSEKVGSLSGGWKMKLALARAMLMKADVLLLDEPTN 630
                 456789***********9999999999******************************8 PP

  == domain 3  score: 89.1 bits;  conditional E-value: 4.3e-28
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEE.....................EETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGei.....................lldgkdlkeqeleslrkeigvlpqepqlfpeltvre 78 
                 l+nvs +l+ ++++ai+G nGaGKStL+kll+g++ pt+G++                     +l++++                              
  KHJ32974.1 744 LHNVSCQLSLSSRTAIIGGNGAGKSTLIKLLTGETVPTSGRVekhpnlrigyikqhalehvemHLEKTP------------------------------ 812
                 79****************************************555555555444444444444333333.............................. PP

                 H...............................................................................................HHH CS
                 x...............................................................................................xxx RF
    ABC_tran  79 n...............................................................................................esd 82 
                 n                                                                                               e++
  KHJ32974.1 813 NqylqwryangddrevhmkqtrilsdadkaqmekwididgkggkqiealmgrqkwkksfqyevkwkgllpkynsqisretlielgfdklvqefddhEAS 911
                 134444444444455555555555555555555666666779999999999999999999999999999999898888889999998888876665444 PP

                 TC........HHHHHHHSTTGGTTCBGESTTS.GGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xx........xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  83 ee........iekalsklglkelkdtvvkssp.ssLSgGqkqrvalarallkkpkllllDEpta 137
                 +e        ++ + +++++ +l+ ++++++    LSgGqk++v+la a++++p ll+lDEpt+
  KHJ32974.1 912 REglgfrellPKVISKHFQDLGLDPEIADHNEiGGLSGGQKVKVVLAGAMWNNPHLLVLDEPTN 975
                 448888888888888888888899999998889******************************8 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.011       9.1      28      44 ..     513     529 ..     500     534 .. 0.86
   2 !   17.5   0.0   2.7e-06    0.0022     123     204 ..     578     664 ..     566     676 .. 0.78
   3 !   23.6   0.0   3.7e-08     3e-05      25     202 ..     755    1006 ..     743    1015 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.011
                 EEEESTTSSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxx RF
       SMC_N  28 aivGpNGSGKsnlldAi 44 
                  + G+NG+GKs ll +i
  KHJ32974.1 513 GLCGRNGAGKSTLLRSI 529
                 579***********998 PP

  == domain 2  score: 17.5 bits;  conditional E-value: 2.7e-06
                 HHHHHHCTT-STT..........CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC CS
                 xxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 123 vsellesagiske..........lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlek 204
                 +se+l+++g+++           +LSgG k    + L +A  +  +a + llDe   +LD +nvk + e+lk++s +   +++s+++++l +
  KHJ32974.1 578 ISEVLSEVGFTSGpsgrqsekvgSLSGGWK----MKLALARAMLMKADVLLLDEPTNHLDVANVKWLQEYLKSHS-EITSLIVSHDSGFLDE 664
                 555666666655566666666668999977....556667778888999**************************.6677788999888765 PP

  == domain 3  score: 23.6 bits;  conditional E-value: 3.7e-08
                  SEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEE...........SSSSSSCEEEEEEEETTSEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxx RF
       SMC_N   25 sftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkk...........lkiekeevsisrrvkrkgese 110 
                  s tai+G NG+GKs l+  +    Ge+  ++ r ek  +l     +++++++  ve++++++ ++            +++ +++ i   + + +  e
  KHJ32974.1  755 SRTAIIGGNGAGKSTLIKLL---TGETVPTSGRVEKHPNLRIGYIKQHALEH--VEMHLEKTPNQylqwryangddREVHMKQTRILSDADKAQM-E 845 
                  579*************9877...899999999****9999555356666665..44444333333345555222222444444444444444433.4 PP

                  EEETTEEE-HHHHHHHHHCTT-STT........................................................................ CS
                  xxxxxxxxxxxxxxxxxxxxxxxxx........................................................................ RF
       SMC_N  111 ykingkevtkkevsellesagiske........................................................................ 135 
                   +i+      k+++ l+ +++ +k+                                                                        
  KHJ32974.1  846 KWIDIDGKGGKQIEALMGRQKWKKSfqyevkwkgllpkynsqisretlielgfdklvqefddheasreglgfrellpkviskhfqdlgldpeiadhn 942 
                  455555556688999******9999************************************************************************ PP

                  ...CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHC CS
                  ...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  136 ...lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreeml 202 
                      LSgG+k    + +++A  + +   l +lDe    LD      +a  ++  +    +i+is++ee++
  KHJ32974.1  943 eigGLSGGQK----VKVVLAGAMWNNPHLLVLDEPTNFLDRDSLGGLAVAIRDYK--GGVIMISHNEEFV 1006
                  *********9....67889999999999************************999..89*******9986 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.1    0.0002      0.16       3      19 ..     513     529 ..     512     542 .. 0.88
   2 !   20.3   0.0   4.9e-07    0.0004     229     303 .]     594     663 ..     556     663 .. 0.78
   3 !   12.7   2.2   9.9e-05     0.081       2      19 ..     757     774 ..     756     778 .. 0.93
   4 ?   -0.8   0.0       1.3   1.1e+03     105     148 ..     808     851 ..     797     854 .. 0.92
   5 ?    5.7   0.0     0.014        11     234     299 ..     944    1003 ..     876    1006 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.0002
      AAA_21   3 vliGpNgsGKSnLLdal 19 
                 +l G+Ng+GKS+LL+ +
  KHJ32974.1 513 GLCGRNGAGKSTLLRSI 529
                 699***********988 PP

  == domain 2  score: 20.3 bits;  conditional E-value: 4.9e-07
      AAA_21 229 gqelparelSdGtkrllalltallralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltTHSpllld 303
                 +q   + +lS G k  lal+ a+l  +   ++ll+DEp n+L+ + ++ l e lk++s+  +  ++++H+  +ld
  KHJ32974.1 594 RQSEKVGSLSGGWKMKLALARAMLMKA---DVLLLDEPTNHLDVANVKWLQEYLKSHSE--ITSLIVSHDSGFLD 663
                 555566667777777777777777766...*****************************..********988776 PP

  == domain 3  score: 12.7 bits;  conditional E-value: 9.9e-05
      AAA_21   2 nvliGpNgsGKSnLLdal 19 
                 +++iG Ng+GKS+L+++l
  KHJ32974.1 757 TAIIGGNGAGKSTLIKLL 774
                 89**************99 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 1.3
      AAA_21 105 leeedvfnpeargirggvsvfslkelsvsepndlqfgkaltdit 148
                 le++++ + ++r++ g+ ++ + k+  + ++ d+ +++ ++di+
  KHJ32974.1 808 LEKTPNQYLQWRYANGDDREVHMKQTRILSDADKAQMEKWIDID 851
                 6789999********************************99986 PP

  == domain 5  score: 5.7 bits;  conditional E-value: 0.014
      AAA_21  234 arelSdGtkrllalltallralkkgsllliDEpEngLHPkllrrllellkelsrngaQviltTHSp 299 
                  +  lS G+k    l+ a++  +    ll++DEp n+L+   l  l+  +++ +     vi+ +H+ 
  KHJ32974.1  944 IGGLSGGQKVKVVLAGAMWNNP---HLLVLDEPTNFLDRDSLGGLAVAIRDYKG---GVIMISHNE 1003
                  4557999999999999999999...89**********98777777766655544...788888875 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   6.1e-05      0.05      24      41 ..     514     531 ..     501     568 .. 0.86
   2 !   21.4   0.0   3.6e-07    0.0003      22     130 ..     757     867 ..     743     910 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 6.1e-05
      AAA_23  24 ItGpNGaGKTTildAikl 41 
                 ++G NGaGK+T+l+ i  
  KHJ32974.1 514 LCGRNGAGKSTLLRSIAT 531
                 79************9976 PP

  == domain 2  score: 21.4 bits;  conditional E-value: 3.6e-07
      AAA_23  22 tlItGpNGaGKTTildAiklaLygetprlsrks........grgfeksdveiesegkvkayveltfenkdgrytrsiererelskkkgkttkkaklell 112
                 t+I+G NGaGK+T++  ++  +   ++r ++          +  +e+ + +   e++ ++y++ ++ n d+r   +++ +++++ +++++ +++k   +
  KHJ32974.1 757 TAIIGGNGAGKSTLIKLLTGETVPTSGRVEKHPnlrigyikQHALEHVEMH--LEKTPNQYLQWRYANGDDR---EVHMKQTRILSDADKAQMEKWIDI 850
                 89************9987755554444444433555444322222233333..3357778888888888885...688888888888888887766666 PP

      AAA_23 113 eideleqfisellgskki 130
                 + +   ++i+ l+g++k 
  KHJ32974.1 851 DGKG-GKQIEALMGRQKW 867
                 6665.6888888888765 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   0.00025       0.2      25      42 ..     512     529 ..     500     531 .. 0.78
   2 !   16.9   0.4   4.8e-06    0.0039      13      39 ..     745     771 ..     743     781 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00025
      AAA_29  25 tlltGpsGsGKSTllDAi 42 
                 + l G++G+GKSTll +i
  KHJ32974.1 512 YGLCGRNGAGKSTLLRSI 529
                 5699**********9665 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 4.8e-06
      AAA_29  13 dghtieidlkgatlltGpsGsGKSTll 39 
                 ++ + +++l++ t ++G +G+GKSTl+
  KHJ32974.1 745 HNVSCQLSLSSRTAIIGGNGAGKSTLI 771
                 556677788889**************9 PP

>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.4   3.9e-09   3.2e-06       2      54 .]     857     908 ..     856     908 .. 0.88

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 3.9e-09
                 EEEEEEEEEEETTEECEEEEEEETTSTGGGTEEEE.GGGCSSHSHHHHHHHHHH CS
      Chromo   2 eVerIidhrtdkdgleleYlVKWkglpysentWEp.eenlekcfqelideFkkr 54 
                 ++e ++++++ k+    +Y VKWkgl +++n+  + e+++e  f +l++eF+++
  KHJ32974.1 857 QIEALMGRQKWKKSF--QYEVKWKGLLPKYNSQISrETLIELGFDKLVQEFDDH 908
                 799************..**************777736688888********985 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0012      0.97       2      21 ..     512     531 ..     511     657 .. 0.82
   2 !   14.3   0.0     4e-05     0.033       2      27 ..     757     782 ..     756     808 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0012
                 EEEEESTTSSHHHHHHHHHT CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltg 21 
                  ++ Gr  +GKStL++++  
  KHJ32974.1 512 YGLCGRNGAGKSTLLRSIAT 531
                 5799*************974 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 4e-05
                 EEEEESTTSSHHHHHHHHHTSTEEES CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivs 27 
                  ai+G   +GKStLi+ ltge++ +s
  KHJ32974.1 757 TAIIGGNGAGKSTLIKLLTGETVPTS 782
                 69******************955443 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   0.00073       0.6      96     121 ..     506     531 ..     499     539 .. 0.87
   2 !   13.9   0.1   4.7e-05     0.038      93     132 ..     747     787 ..     720     802 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00073
                  HCTTSEEEEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase  96 llkdktsvlvGqSGvGKStLinallp 121
                  llk++   l+G  G+GKStL+ +++ 
   KHJ32974.1 506 LLKGHRYGLCGRNGAGKSTLLRSIAT 531
                  67888999*************99976 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 4.7e-05
                  HHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S---- CS
  RsgA_GTPase  93 lkellkd.ktsvlvGqSGvGKStLinallpelelktgevse 132
                  ++ +l+  + ++++G  G+GKStLi+ l++e+    g v +
   KHJ32974.1 747 VSCQLSLsSRTAIIGGNGAGKSTLIKLLTGETVPTSGRVEK 787
                  55555544678999****************97766666655 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0042       3.4      28      43 ..     514     529 ..     510     564 .. 0.90
   2 !   12.6   0.4    0.0001     0.082      17      43 ..     749     774 ..     744     776 .. 0.91

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0042
      AAA_15  28 liGkNnsGKSsileal 43 
                 l+G+N++GKS++l+ +
  KHJ32974.1 514 LCGRNGAGKSTLLRSI 529
                 8************988 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 0.0001
      AAA_15  17 veidlseeltvliGkNnsGKSsileal 43 
                 ++++ls+  t +iG N++GKS+++++l
  KHJ32974.1 749 CQLSLSS-RTAIIGGNGAGKSTLIKLL 774
                 7889999.9***************998 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.21   1.7e+02       4      21 ..     514     531 ..     511     557 .. 0.83
   2 !   13.9   0.0     6e-05     0.049       2      39 ..     757     800 ..     756     871 .. 0.59

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.21
      AAA_28   4 itGgestGKTtlleaLaa 21 
                 + G  ++GK+tll+ +a 
  KHJ32974.1 514 LCGRNGAGKSTLLRSIAT 531
                 568889********9986 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 6e-05
      AAA_28   2 ivitGgestGKTtlleaLaar......gypvvpEaareileekl 39 
                  +i+Gg ++GK+tl++ L+ +       ++ +p     ++++++
  KHJ32974.1 757 TAIIGGNGAGKSTLIKLLTGEtvptsgRVEKHPNLRIGYIKQHA 800
                 68****************94423333322233333333443333 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.1    0.0039       3.2      10      30 ..     514     534 ..     512     656 .. 0.74
   2 !    7.1   0.0    0.0077       6.2       8      29 ..     757     778 ..     754     824 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0039
      AAA_22  10 vtGesGtGKTtllrrlleqld 30 
                 ++G  G+GK+tllr ++  + 
  KHJ32974.1 514 LCGRNGAGKSTLLRSIATGKL 534
                 79************9988764 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0077
      AAA_22   8 lvvtGesGtGKTtllrrlleql 29 
                 ++++G  G+GK+tl++ l+ + 
  KHJ32974.1 757 TAIIGGNGAGKSTLIKLLTGET 778
                 689*************998765 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       4.4   3.6e+03      13      54 ..     159     207 ..     159     226 .. 0.73
   2 ?    4.2   0.0     0.073        59       3      19 ..     514     530 ..     513     588 .. 0.80
   3 ?    7.8   0.0    0.0055       4.5       3      63 ..     759     832 ..     758     862 .. 0.64

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 4.4
      AAA_18  13 tlakeLskrlgf.......gvnlrdvakenglllevdpealdeskrlde 54 
                 tl+ +L+kr+g           l+++a +  ++l  ++e+ +e+++l++
  KHJ32974.1 159 TLSSYLEKRTGKwqgtvaaYKLLQKMADKAKMELATTKEEANEKDILRK 207
                 7889999998444888888888888999988888888885555555544 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.073
      AAA_18   3 ltGtpGvGKttlakeLs 19 
                 l+G  G+GK+tl + ++
  KHJ32974.1 514 LCGRNGAGKSTLLRSIA 530
                 8999*********9984 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0055
      AAA_18   3 ltGtpGvGKttlakeL..........skrl.gf..gvnlrdvakenglllevdpe...aldeskrldedkldkllda 63 
                 + G  G+GK+tl k L           +++ ++  g++ ++ + + ++ le +p+   +    + ++ d +++++++
  KHJ32974.1 759 IIGGNGAGKSTLIKLLtgetvptsgrVEKHpNLriGYIKQHALEHVEMHLEKTPNqylQ---WRYANGDDREVHMKQ 832
                 77889***********7766666666444434488999999999999999999995553...333333333333333 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0    0.0018       1.5       6      23 ..     515     532 ..     511     566 .. 0.84
   2 ?    3.3   0.5     0.085        69       3      19 ..     757     773 ..     755     778 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0018
                 EC-TTTCHHHHHHHHHHH CS
       NACHT   6 qGeaGsGKTtLlqklala 23 
                  G++G GK+tLl+++a+ 
  KHJ32974.1 515 CGRNGAGKSTLLRSIATG 532
                 69*************986 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.085
                 EEEEC-TTTCHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqk 19 
                  ++ G +G GK+tL++ 
  KHJ32974.1 757 TAIIGGNGAGKSTLIKL 773
                 6899**********975 PP

>> AAA_13  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0063       5.1      23      43 ..     516     536 ..     511     575 .. 0.70
   2 ?    5.2   0.0    0.0084       6.8      15      38 ..     753     776 ..     746     811 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0063
      AAA_13  23 GwNGaGKTtLSrllrslelge 43 
                 G+NGaGK+tL r ++  +l+ 
  KHJ32974.1 516 GRNGAGKSTLLRSIATGKLEG 536
                 9*********99999876654 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0084
      AAA_13  15 fkriNliYGwNGaGKTtLSrllrs 38 
                 ++ +  i G NGaGK+tL +ll  
  KHJ32974.1 753 LSSRTAIIGGNGAGKSTLIKLLTG 776
                 55666789**********999976 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0    0.0074         6      28      50 ..     508     530 ..     486     535 .. 0.83
   2 ?    5.6   0.2    0.0082       6.7      12      54 ..     736     779 ..     723     786 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0074
                 -SEEEEEEE-TTSSHHHHHHHHH CS
        MeaB  28 raqvvGltGvPGaGkstlvealg 50 
                 + ++ Gl G  GaGkstl+  ++
  KHJ32974.1 508 KGHRYGLCGRNGAGKSTLLRSIA 530
                 7899**************98765 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0082
                 SH.HHHHHHHHHGGG-S-SEEEEEEE-TTSSHHHHHHHHHHHHH CS
        MeaB  12 rp.eakellerllakaGraqvvGltGvPGaGkstlvealglelr 54 
                 +p ++k  l++++ +   + +  + G  GaGkstl++ l+ e +
  KHJ32974.1 736 YPgASKPSLHNVSCQLSLSSRTAIIGGNGAGKSTLIKLLTGETV 779
                 55567778888888889999999*************99987655 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0049         4       4      20 ..     514     530 ..     513     568 .. 0.73
   2 ?    4.1   0.0     0.059        48       4      20 ..     759     775 ..     757     832 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0049
      AAA_33   4 lvGlpGsGKstlaerll 20 
                 l+G +G+GKstl+++++
  KHJ32974.1 514 LCGRNGAGKSTLLRSIA 530
                 69************987 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.059
      AAA_33   4 lvGlpGsGKstlaerll 20 
                 ++G +G+GKstl++ l 
  KHJ32974.1 759 IIGGNGAGKSTLIKLLT 775
                 6899********99875 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1      0.23   1.9e+02       3      19 ..     514     530 ..     513     535 .. 0.87
   2 ?   -3.0   0.0       8.3   6.7e+03     112     161 ..     588     651 ..     586     657 .. 0.56
   3 ?    9.1   0.0    0.0015       1.3       2      28 ..     758     783 ..     757     851 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.23
                 EEEBTTTTHHHHHHHHH CS
   Dynamin_N   3 vvGsqSsGKSSvlnaLl 19 
                 ++G   +GKS++l ++ 
  KHJ32974.1 514 LCGRNGAGKSTLLRSIA 530
                 69999********9886 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 8.3
                 -SSSGTTS...............HHHHHHHSTTEEEEEEEETTS-CCC-CHHHHHHHHSTTBTTE CS
   Dynamin_N 112 dsvnkrdq...............elvkeyikkadiilavtsanhdlsnsealflarevdpkgkrt 161
                 +s + ++q               +l++ ++ kad++l+  + nh l  ++++ l++ ++++++ t
  KHJ32974.1 588 TSGPSGRQsekvgslsggwkmklALARAMLMKADVLLLDEPTNH-LDVANVKWLQEYLKSHSEIT 651
                 55555555555555666666665666666777777777777777.33345555555555555555 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.0015
                 EEEEBTTTTHHHHHHHHHTS--S---S CS
   Dynamin_N   2 avvGsqSsGKSSvlnaLlgedilprgp 28 
                 a++G   +GKS+++  L+ge + p++ 
  KHJ32974.1 758 AIIGGNGAGKSTLIKLLTGETV-PTSG 783
                 689*****************96.5443 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       3.6   2.9e+03      94     145 ..     144     198 ..      90     247 .. 0.50
   2 ?    2.0   0.0      0.24   1.9e+02      25      45 ..     511     531 ..     503     540 .. 0.84
   3 ?   10.7   0.2   0.00051      0.41      22      48 ..     753     779 ..     746     791 .. 0.88
   4 ?   -3.2   0.1       8.7   7.1e+03     152     181 ..    1078    1107 ..    1045    1115 .. 0.60

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 3.6
       DUF87  94 pwsldpeelldllee...ddkpaaavqrsvleealdqakakeekeklssdepvek 145
                 ++sl+pe l++ l     ++ ++++ +++    a++ +++  +k k+  ++  e+
  KHJ32974.1 144 FKSLSPEALVCGLLPtlsSYLEKRTGKWQGTVAAYKLLQKMADKAKMELATTKEE 198
                 5566666555433332442222222222222222222222222222222222222 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.24
       DUF87  25 HlAilgsTGsGKSntvavLle 45 
                 + +  g+ G+GKS++ +++  
  KHJ32974.1 511 RYGLCGRNGAGKSTLLRSIAT 531
                 56788999********99975 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 0.00051
       DUF87  22 vtrHlAilgsTGsGKSntvavLleell 48 
                 ++ ++Ai+g  G+GKS+++++L  e +
  KHJ32974.1 753 LSSRTAIIGGNGAGKSTLIKLLTGETV 779
                 58899*****************98876 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 8.7
       DUF87  152 kekeelrklknqaiarlldkledllrkggs 181 
                  k+k + ++lk++  +r l+++e+l + +g+
  KHJ32974.1 1078 KKKMTKKELKEREVRRRLRHIEWLSSPKGT 1107
                  334456777777777777777777666665 PP

>> DUF3584  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.1    0.0087       7.1      21      37 ..     513     529 ..     504     530 .. 0.83
   2 ?    6.1   0.3     0.002       1.7      13      37 ..     750     774 ..     746     775 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0087
     DUF3584  21 nieGtNaaGKTtLlrLi 37 
                  ++G N+aGK tLlr i
  KHJ32974.1 513 GLCGRNGAGKSTLLRSI 529
                 59*************76 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.002
     DUF3584  13 eldldghtnieGtNaaGKTtLlrLi 37 
                 +l l+ +t i G N+aGK tL++L+
  KHJ32974.1 750 QLSLSSRTAIIGGNGAGKSTLIKLL 774
                 58999*****************997 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.032        26       3      20 ..     514     531 ..     513     552 .. 0.87
   2 ?    4.2   0.0     0.066        54       3      22 ..     759     778 ..     757     805 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.032
  RNA_helicase   3 lyGpsgeGKStlakeLak 20 
                   l+G++g GKStl +++a+
    KHJ32974.1 514 LCGRNGAGKSTLLRSIAT 531
                   79************9886 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.066
  RNA_helicase   3 lyGpsgeGKStlakeLakal 22 
                   + G +g GKStl+k L+ + 
    KHJ32974.1 759 IIGGNGAGKSTLIKLLTGET 778
                   789***********987665 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.076        62       3      22 ..     510     529 ..     508     543 .. 0.84
   2 ?    6.5   0.3    0.0075       6.1       4      23 ..     756     775 ..     753     782 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.076
      AAA_24   3 lkiliyGpsgiGKTtlakel 22 
                  ++ + G +g+GK+tl++++
  KHJ32974.1 510 HRYGLCGRNGAGKSTLLRSI 529
                 577899**********9987 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0075
      AAA_24   4 kiliyGpsgiGKTtlakelg 23 
                 + +i+G +g+GK+tl+k l+
  KHJ32974.1 756 RTAIIGGNGAGKSTLIKLLT 775
                 789*************9884 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.038        31      23      40 ..     514     531 ..     505     646 .. 0.87
   2 ?    5.9   0.1     0.012       9.5      21      39 ..     757     775 ..     747     786 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.038
      AAA_30  23 ltGpAGtGKttalkalre 40 
                 l G+ G+GK+t+l++++ 
  KHJ32974.1 514 LCGRNGAGKSTLLRSIAT 531
                 67999*********9975 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.012
      AAA_30  21 avltGpAGtGKttalkalr 39 
                 +++ G+ G+GK+t++k l+
  KHJ32974.1 757 TAIIGGNGAGKSTLIKLLT 775
                 6899***********9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       684  (0.0381505); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        89  (0.00496402); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 0.89u 0.28s 00:00:01.17 Elapsed: 00:00:00.44
# Mc/sec: 7585.69
//
Query:       KHJ32975.1  [L=1401]
Description: putative wd repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-09   38.3  13.6     0.0024   18.7   0.1    5.0  4  WD40          WD domain, G-beta repeat
    0.00025   20.6  15.4    0.00061   19.4  15.4    1.6  1  Zn_ribbon_17  Zinc-ribbon, C4HC2 type
     0.0003   21.1   1.2    0.00069   19.9   0.1    2.3  2  RWD           RWD domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.2      0.12   7.3e+02      13      38 .]      74     101 ..      60     101 .. 0.69
   2 !   17.5   0.5   9.6e-07    0.0058       4      38 .]     113     149 ..     110     149 .. 0.80
   3 !    6.6   0.3    0.0026        15      19      38 .]     173     192 ..     158     192 .. 0.72
   4 !   18.7   0.1     4e-07    0.0024       3      38 .]     199     236 ..     198     236 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.12
                 EEEEEEETTSSE...EEEEETTSEEEEEE CS
        WD40  13 vtslafspdgaw...lasGsdDgtvriWd 38 
                 v ++++sp  a    ++s   +++v +W+
  KHJ32975.1  74 VADVQWSPFAARdywVVSTA-NQNVLVWN 101
                 66777666666666698767.*******8 PP

  == domain 2  score: 17.5 bits;  conditional E-value: 9.6e-07
                 EEEEESSSS.EEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   4 lrtltGHss.vtslafspdgaw.lasGsdDgtvriWd 38 
                  +tlt+H+  +t++ fs +++  la++  Dg v++Wd
  KHJ32975.1 113 EHTLTAHKRaITDINFSAHHPDiLATCAVDGYVHLWD 149
                 699****556****866666664689999*******9 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0026
                 ETTSSEEEEEETTSEEEEEE CS
        WD40  19 spdgawlasGsdDgtvriWd 38 
                 ++ ++ ++++s D+ +r+Wd
  KHJ32975.1 173 NRQNPHILASSHDRWLRVWD 192
                 445555555555*******9 PP

  == domain 4  score: 18.7 bits;  conditional E-value: 4e-07
                 EEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 
                 +lr++ +H s +++l++++     ++++s D+t+++Wd
  KHJ32975.1 199 PLRSINAHaSKIYGLDWNRTRETaIVTCSLDKTIKFWD 236
                 689999**777****666666668789**********9 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4  15.4     1e-07   0.00061       3      55 ..    1318    1369 ..    1316    1371 .. 0.93

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1e-07
  Zn_ribbon_17    3 llksCayCelavkgrvvlcgvCeHvlHasCarewfenddlaeCpsGCGckcle 55  
                    ++  C +C  +v   ++ c +C+ v H +C+    +++  ++Cp GC c c  
    KHJ32975.1 1318 RQLRCIICLEPVSAIFCPCLSCGCVSHLDCLIIYHSQGY-SQCPGGCDCICTI 1369
                    5678*********************************99.**********975 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.1   1.2e-07   0.00069      46     109 ..     500     591 ..     440     598 .. 0.79
   2 ?   -3.3   0.1       1.9   1.1e+04      15      41 ..    1108    1134 ..    1095    1157 .. 0.60

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 1.2e-07
                 ............................TT-CEEEEEEEEE-SSTT.SS--EEEEEECCSS-HHHHHHHHHHHHHHHHHT..TTS--CHHHH CS
                 x.........................xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxx RF
         RWD  46 e.........................feekkkpslkleiklpeeYP.eeaPiislsstenlpkeqvksleekleelaeen..lgepvifali 109
                 +                         +e+  ++++kl++ +pe YP  e P+++++ t  ++ +  ++l ++++++ae++  +g+ ++ +++
  KHJ32975.1 500 NqlpkikfddvdmekrmiivsvngpwAEDAGLVHIKLTVLFPEYYPeMESPEFHIEKTSLITSSTHAKLLKDVQHIAESFsaHGQGCLEKIF 591
                 04444444555555566677777777788899**************88***********999999999**********99999999987766 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.9
                  TTTCCCCHT--EE--S-EEEEEEECEC CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD   15 pdefevienenysikleikikldeded 41  
                  +   + ien+  s+ ++iki ++ +  
  KHJ32975.1 1108 ETIDSNIENNSSSQCYKIKIVPQNKHR 1134
                  444455555555555555555444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       742  (0.0413855); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.26s 00:00:01.01 Elapsed: 00:00:00.43
# Mc/sec: 9827.52
//
Query:       KHJ32976.1  [L=540]
Description: hypothetical protein EV44_g3566 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-20   73.9   0.1      2e-20   73.2   0.1    1.3  1  DDE_1           DDE superfamily endonuclease
    1.3e-06   28.3   0.0    3.1e-06   27.1   0.0    1.7  1  HTH_Tnp_Tc5     Tc5 transposase DNA-binding domain
  ------ inclusion threshold ------
       0.14   12.8   1.2       0.24   12.0   1.2    1.4  1  Mg_chelatase_C  Magnesium chelatase, subunit ChlI C-terminal
       0.19   12.0   1.6       0.95    9.7   0.1    2.6  3  DRY_EERY        Alternative splicing regulator


Domain annotation for each model (and alignments):
>> DDE_1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.2   0.1   4.5e-24     2e-20      18     132 ..     190     306 ..     186     343 .. 0.91

  Alignments for each domain:
  == domain 1  score: 73.2 bits;  conditional E-value: 4.5e-24
       DDE_1  18 LkplvigkaksprafkngektkkkldveyksnrkawltssifeeWLkvfdkrle..aekrkilLlldssrshetvel.leselqniklvflPassasll 113
                 L pl+i+k++   + +  ++ +k  +++ +++ ++w+  ++   WLk+fd++++  + +r  lL++d+++sh+ +e+ +  ++++i + +lP++s+++ 
  KHJ32976.1 190 LTPLIIFKGEFVLEPWV-NVLPKGKQWKTTATPNGWTNRDVTLLWLKHFDEQTKarRTGRFRLLVIDGHDSHQYLEFeKYFDDNDIIIRCLPPHSSHIT 287
                 89***************.***********************************99999******************988889999************** PP

       DDE_1 114 qPldqgvvselKarYrrql 132
                 qPld gv+s lK++   q+
  KHJ32976.1 288 QPLDLGVFSILKSEHGNQI 306
                 *************998876 PP

>> HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   6.9e-10   3.1e-06       4      63 ..      52     112 ..      49     115 .. 0.92

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 6.9e-10
                  HHHHHHHHHHHHC-CT---SCHHHHHHHHHHH..HHSSSCT-TT-S--CHHHHHHHHHTS-- CS
  HTH_Tnp_Tc5   4 lEkaLleWirqlrergipitgelirekAqela..slaadlgepdfkaSkgWldrFkkRhglk 63 
                  +E++++++i +l+++g+p   e i  +Aq ++  ++ ++++  + k++ +W +rF kR ++ 
   KHJ32976.1  52 EENSIVKYIIDLDAKGYPAKYEDITPMAQIILglKN-TNPQTNVRKLGTKWPYRFVKRRPVI 112
                  79*******************************866.89*******************8765 PP

>> Mg_chelatase_C  Magnesium chelatase, subunit ChlI C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.2   5.4e-05      0.24      28      92 ..     389     456 ..     369     459 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 5.4e-05
  Mg_chelatase_C  28 elsgeelrevcelde..eaeelleeaierlglsaRaydrilkvArTiADLegseeieeehla.eAlqy 92 
                      l+ e++r++++ ++   +++l e++ ++ +lsaRa ++  +v + iA L g+e+ e+  ++ eA++y
      KHJ32976.1 389 LLQIEHVRNSIRATQvfMSNQLNETLTANARLSARAKQKRKRVQKGIAGLVGEEDLERIRVEkEAAAY 456
                     5555566666555542246788899999*************************999988885255555 PP

>> DRY_EERY  Alternative splicing regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.14   6.5e+02      21      41 ..     127     147 ..     115     149 .. 0.86
   2 ?   -3.8   0.1       3.2   1.4e+04      79      93 ..     247     261 ..     237     270 .. 0.55
   3 ?    9.7   0.1   0.00021      0.95      20      63 ..     341     383 ..     331     461 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.14
    DRY_EERY  21 aesgahLvpwqgdpdllIDRf 41 
                 +e+  +L  w  ++++ +DR+
  KHJ32976.1 127 MENIPILEKWFDQEKDVVDRY 147
                 566778999***********9 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 3.2
    DRY_EERY  79 ERYrdLiknefeevs 93 
                  R+r L+ + ++ ++
  KHJ32976.1 247 GRFRLLVIDGHDSHQ 261
                 566666655554443 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00021
    DRY_EERY  20 aaesgahLvpwqgdpdllIDRfDvRalLddipeakkee.kkarse 63 
                  a + + L+pw+   ++ I R DvR+    +++ ++e+  +++ +
  KHJ32976.1 341 SAWKASGLIPWN--ASVVISRLDVRLVTPPLQQIRQEDwVSQTPR 383
                 4456889*****..9***********9888888876654222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       769  (0.0428914); expected 358.6 (0.02)
Passed bias filter:                      662  (0.0369234); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.24s 00:00:00.85 Elapsed: 00:00:00.40
# Mc/sec: 4007.23
//
Query:       KHJ32977.1  [L=1092]
Description: hypothetical protein EV44_g3123 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.7e-39  134.2   0.0    8.4e-39  133.4   0.0    1.4  1  RVT_1            Reverse transcriptase (RNA-dependent DNA pol
    1.8e-16   60.0   0.0    6.2e-16   58.3   0.0    2.0  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase
    0.00039   20.0   0.0     0.0029   17.2   0.0    2.3  2  Exo_endo_phos    Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.4   0.0   1.4e-42   8.4e-39       3     220 ..     478     734 ..     476     736 .. 0.93

  Alignments for each domain:
  == domain 1  score: 133.4 bits;  conditional E-value: 1.4e-42
                 -TT.......S-EEE......-THHHHCTB--...........-------HHHH................HCCHTS-..-EEEEEEBCCGCCCSBB-GG CS
       RVT_1   3 Kkg......pgsyRpisllsvdykalnkliakrLkdvl..ekllsenqpgfrpgrstldav...edllkalkkkkka..klllklDlkkaFdsvpleel 88 
                 K+       p+syRpi+l +++ k+++kl+a+r+ +++   + l+  q+g r++rst+ a+   ++ ++++++ + +    +l lD+k+aFd+v+ ++l
  KHJ32977.1 478 KERrpdytlPSSYRPIALENSLAKIVEKLVANRMIEAAeqHNMLPWAQMGARKNRSTISALellTSTVQTAWEARPSrvVSMLGLDIKGAFDNVSKRRL 576
                 55555677789***************************989999********************777777788877723556789************** PP

                 GGGGG-EEET.........................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHH......HH CS
       RVT_1  89 lrkltafkvptklinliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskee......lq 181
                 l  l++ ++p++++ +i++fls+r++ +++ g++s  + ++ g+pqGs+lSP+lf ++++ell++l+++ ++     ++DD+ +++ ++++      l+
  KHJ32977.1 577 LWGLKREGFPDWVTTYIENFLSHRRTKISFAGHTSDWIQTEVGIPQGSHLSPILFLFYISELLESLQQHENNYMAFGFVDDTNLVAWGRSArencytLE 675
                 ********************************************************************999999999***********99999****** PP

                 HHHHHHHHHHHHTT--BEGGG-EEE.........................ESSEEETTE CS
       RVT_1 182 elleaveewlkesglkinpeKtklvlft...................v.kseevkyLGv 220
                  + +++ +w+k++g +++peK +l++f                       ++e+k+LGv
  KHJ32977.1 676 LAHSKCLAWAKRYGAEFAPEKYQLIHFSrkrgssedlkekieleditInPRSEIKVLGV 734
                 *****************************************999986369********8 PP

>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.3   0.0     1e-19   6.2e-16       2     118 ..      77     200 ..      76     201 .. 0.82

  Alignments for each domain:
  == domain 1  score: 58.3 bits;  conditional E-value: 1e-19
  Exo_endo_phos_2   2 liisvYippsd.elenlestlekllselkspkiiilGDfNakhplWgsedtdssargeeLiefleehslsllnllksgptfkssng.....sst 89 
                      +i++vY p ++ +  +  +++++++   +  ++++lGDfN +hp+Wg++  + + r+++L++++  ++l l+ +++  ptf+++++     +++
       KHJ32977.1  77 RIVNVYSPTTSgSELTGWDEITEAIAHDRG-SCLFLGDFNCHHPMWGGHGAQRDTRAQQLLNYTLGNGLDLI-TPEGIPTFRRNGArgtiqETV 168
                      799****99996555566777777766654.9****************887779****************44.44545***99888999*99** PP

  Exo_endo_phos_2  90 iDltltsdnlals...kleleeedlgSDHrpi 118
                      iDlt+++ +l++s   +   e+  +  DH pi
       KHJ32977.1 169 IDLTFATGDLLKSihaCRPREDWCIRHDHIPI 200
                      *************9954455555677899988 PP

>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   4.8e-07    0.0029     120     205 ..      81     268 ..       5     296 .. 0.58
   2 ?    0.3   0.0     0.071   4.2e+02      34     150 ..     244     325 ..     218     454 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 4.8e-07
                    HGHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SSSTSGGGBSCGHHHHHHCTTTH.................H..................SSC CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................x..................xxx RF
  Exo_endo_phos 120 dhdlvrdlqllalllqvealnadrgapvivaGDfNarpsdddsrvlrtrglalapap.................v..................gly 180
                     +        l  ++++ ++ a+  ++++++GDfN ++  ++ +  +   +a                      +                  +  
     KHJ32977.1  81 VYSPTTSGSELTGWDEITEAIAHDRGSCLFLGDFNCHHPMWGGHGAQRDTRAQQLLNytlgngldlitpegiptFrrngargtiqetvidltfATG 176
                    4556666666677888999999999********************999999998888776655555444444440334444455555566666777 PP

                    ESCETTTTTTTTTTTEB-BEEE...................................................................EEE CS
                    xxxxxxxxxxxxxxxxxxxxxx...................................................................xxx RF
  Exo_endo_phos 181 llgggptptyvtraggsrlDri...................................................................las 205
                     l  ++ + ++++ ++ r D+i                                                                   +a+
     KHJ32977.1 177 DLLKSIHACRPREDWCIRHDHIpieiilttgqmlnlerrryvyhkanlekmksmireckweqaqqplvalqeviiqalnehcprahpspFAK 268
                    77777777777777777778887777766666666666665555555555555555555555555555555555555555555555555555 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.071
                    EEEEEEBSCTCHHHHHHHHHTTCEEEEECCH..........................ECSSSTTSSEEEEEECSTEEEEEEEEEEETSSSSGCEEE CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  34 lgLQEvdddelsriplllalggflgasstsp..........................tgggggggnggavlsrfpltslfrrtfiefndlvaalrr 103
                    ++LQE       +i +l+   ++++a+ +++                                                                 
     KHJ32977.1 244 VALQE------VIIQALN--EHCPRAHPSPFakpawsakatelvanarssrrqalatK-------------------------------------- 293
                    56666......3444444..56666655554444444444444444444444444440...................................... PP

                    EEEEEEEEEEEECCCHHGHHHHHHHHHHHHHHHHHHHHHTTSEEEEE CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 104 eplaakleqlniashrdhdlvrdlqllalllqvealnadrgapviva 150
                                    dhd+ r    +++l + ++  ++++++ +va
     KHJ32977.1 294 ---------------EDHDVTRAKLIRQELKKEIRRLKRSSWRSFVA 325
                    ...............45555555555555555555555555555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1092 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       543  (0.0302861); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.31s 00:00:01.04 Elapsed: 00:00:00.46
# Mc/sec: 7171.36
//
Query:       KHJ32978.1  [L=286]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       698  (0.0389313); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2088.78
//
Query:       KHJ32979.1  [L=96]
Description: putative sucrose transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       350  (0.0195214); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.25s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 754.26
//
Query:       KHJ32980.1  [L=161]
Description: hypothetical protein EV44_g1001 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.21   11.2   2.6       0.23   11.0   2.1    1.3  1  EVI2A     Ectropic viral integration site 2A protein (EVI2A)


Domain annotation for each model (and alignments):
>> EVI2A  Ectropic viral integration site 2A protein (EVI2A)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   2.1   1.3e-05      0.23      25     114 ..       7      95 ..       2     106 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 1.3e-05
       EVI2A  25 kanytelwavnetawdsiiqnktngrnksensntnpvtpevdkkskstetle.tetsspsvslapkseeelttpsvvrnsssttqstents 114
                 k ++ ++wa+++  +++ iq ++ + +  +n++t+    e    s+s ++l+ +  + p+   a+ +++el  p+vv++ ss+++s+++t 
  KHJ32980.1   7 KQKTSSYWAIENPLSAELIQDSS-SAQPPQNNQTSHR-FERGLSSSSENQLNsSLLNVPIAHDASRMQRELAPPPVVPKISSHQNSLHQTE 95 
                 567889****************9.5555555444443.44444444444444044567777889999********9999999999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       466  (0.0259914); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1185.80
//
Query:       KHJ32981.1  [L=713]
Description: putative mitochondrial carrier [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-74  245.1   0.5    2.6e-25   88.2   0.0    3.4  3  Mito_carr        Mitochondrial carrier protein
    2.2e-17   63.2   5.9    2.2e-08   34.4   1.0    4.0  4  EF-hand_7        EF-hand domain pair
    1.4e-15   55.6   5.0      1e-07   31.0   0.1    5.7  7  EF-hand_1        EF hand
    1.7e-15   55.5   6.1      4e-07   29.4   0.1    6.3  7  EF-hand_6        EF-hand domain
    3.5e-09   36.4   2.2       0.12   12.2   0.0    4.9  4  EF-hand_8        EF-hand domain pair
    2.1e-08   33.3   1.4    1.9e-05   23.9   0.1    3.8  4  EF-hand_5        EF hand
     0.0017   18.6   0.2        6.3    7.2   0.0    4.1  5  EF-hand_9        EF-hand domain
     0.0041   17.3   0.5       0.61   10.3   0.0    2.8  3  Dockerin_1       Dockerin type I domain
     0.0049   16.3   0.0      0.011   15.1   0.0    1.7  2  RNB              RNB domain
  ------ inclusion threshold ------
      0.087   12.0   0.3        3.2    6.8   0.2    3.0  2  Serine_protease  Gammaproteobacterial serine protease


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.2   0.0   1.4e-28   2.6e-25       6      96 ..     349     440 ..     346     441 .. 0.92
   2 !   70.9   0.0   3.6e-23   6.4e-20       2      94 ..     443     534 ..     442     537 .. 0.93
   3 !   82.6   0.0   7.7e-27   1.4e-23       2      93 ..     541     631 ..     540     634 .. 0.94

  Alignments for each domain:
  == domain 1  score: 88.2 bits;  conditional E-value: 1.4e-28
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS.HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCTT CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaa.ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllkk 96 
                 ++++  G++aga++++v++P+d+vKtr+q+q+++   +  ++  ld+ kk++k+eG+rgly+G+lp+l++vap++a+k+++++  + ++ +k
  KHJ32981.1 349 IHHFGLGSIAGAFGAFVVYPIDLVKTRMQNQRSTRVGQMLYKnSLDCAKKVIKNEGFRGLYSGVLPQLVGVAPEKAIKLTVNDLARSFFSTK 440
                 678999***************************9876655556*******************************************999875 PP

  == domain 2  score: 70.9 bits;  conditional E-value: 3.6e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   2 elsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                 ++++++el++Gg+ag++++++t+Pl++vK+rlq+q++ +k+ +sa+ +     i+++ Gl gly+G+++ llr +p sa++f+ y+ lkr ++
  KHJ32981.1 443 KIRIYQELISGGMAGSCQVIFTNPLEIVKIRLQVQGEVAKTINSAPPR-SAVWIIRNLGLVGLYKGASACLLRDVPFSAIYFTGYNHLKRDFF 534
                 57899***********************************99998555.7789************************************9765 PP

  == domain 3  score: 82.6 bits;  conditional E-value: 7.7e-27
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   2 elsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 +l++++ l+aG++ag+ a+ +ttP dv+Ktrlq++ +++++s++ +++++ k+iy++eGlr++++G  +++lr++p+ + ++++ye+l++ll
  KHJ32981.1 541 SLKIYQLLMAGAIAGMPASYLTTPCDVIKTRLQVEVRKGETSYN-SLRHCAKTIYQQEGLRAFFKGGPARVLRSSPQFGFTLAAYEFLQKLL 631
                 6789999*******************************998665.5*******************************************998 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.3   2.1e-08   3.8e-05       4      70 ..      72     130 ..      69     131 .. 0.84
   2 ?   -2.8   0.0         5     9e+03      57      70 ..     157     170 ..     155     171 .. 0.81
   3 !   34.4   1.0   1.2e-11   2.2e-08       2      68 ..     176     271 ..     176     274 .. 0.74
   4 !   13.8   0.1   3.4e-05     0.061      10      68 ..     255     310 ..     253     312 .. 0.92

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 2.1e-08
   EF-hand_7   4 lkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkly 70 
                     F   D++++g+++ ++    +          sk +d e e  f+ fD ++ G++ +d+++kly
  KHJ32981.1  72 YAILFHVADRNHTGKVNLSDWI-TFD------NLLSK-PDAEYEIAFRLFDVNQEGTVKYDDLKKLY 130
                 5567****************66.555......44445.689***********************998 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 5
   EF-hand_7  57 kdGvisfdEFlkly 70 
                 + +++++  F+++ 
  KHJ32981.1 157 HRHELTYPQFCQML 170
                 56899******987 PP

  == domain 3  score: 34.4 bits;  conditional E-value: 1.2e-11
   EF-hand_7   2 eklkeaFkelDtdgdgyldkeellrllrkifqga...............gegsklsd.............eelellfke.fDtdkdGvisfdEFlk 68 
                 e++++aF+ +D+dgdgy++++e++r++ + + ++               + gsk+s              + +e ++++ +D++ d +i++++Fl+
  KHJ32981.1 176 ERVRQAFNHFDKDGDGYIEPDEFQRIILQTSKHKlsdhllenlhtlcniSSGSKISYanvrafqniireiDLVEMIIRKaIDQSEDKKITRTDFLN 271
                 57899********************77777777678888888888888855555555333333333333344777776645*************97 PP

  == domain 4  score: 13.8 bits;  conditional E-value: 3.4e-05
   EF-hand_7  10 elDtdgdgyldkee.llrllrkifqgagegsklsdeelellfkefDtdk.dGvisfdEFlk 68 
                 ++D+  d ++++++ l ++ r+      + s++++ e + lf+   +d  +G++s+++F k
  KHJ32981.1 255 AIDQSEDKKITRTDfLNHAARI-----TRFSHFTPMETDILFHFASLDEpSGRLSLSDFAK 310
                 68************88889998.....***************999999988********87 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0    0.0005      0.89       5      24 ..      75      94 ..      73      97 .. 0.91
   2 !   11.2   0.1   0.00012      0.21       3      25 ..     107     129 ..     105     132 .. 0.89
   3 ?   -1.5   0.0       1.4   2.5e+03      17      28 ..     161     172 ..     159     173 .. 0.85
   4 !   31.0   0.1   5.7e-11     1e-07       2      26 ..     178     202 ..     177     204 .. 0.93
   5 ?   -3.3   0.0       5.1   9.1e+03       2      10 ..     238     246 ..     238     247 .. 0.84
   6 ?    0.0   0.0      0.44   7.9e+02       8      24 ..     255     271 ..     252     275 .. 0.86
   7 ?   -1.9   0.0       1.8   3.2e+03      14      26 ..     300     312 ..     300     313 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0005
                HHHHHTTTSSSEEEHHHHHH CS
   EF-hand_1  5 iFrefDkDgdGkIdfeEfke 24
                +F ++D++++Gk++++++++
  KHJ32981.1 75 LFHVADRNHTGKVNLSDWIT 94
                5999************9986 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00012
                 HHHHHHHTTTSSSEEEHHHHHHH CS
   EF-hand_1   3 keiFrefDkDgdGkIdfeEfkel 25 
                 + +Fr+fD+++ G++ ++++k+l
  KHJ32981.1 107 EIAFRLFDVNQEGTVKYDDLKKL 129
                 669*****************987 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.4
                 EEHHHHHHHHHH CS
   EF-hand_1  17 IdfeEfkellkk 28 
                 +++ +f+++l+ 
  KHJ32981.1 161 LTYPQFCQMLRG 172
                 7999*****986 PP

  == domain 4  score: 31.0 bits;  conditional E-value: 5.7e-11
                 HHHHHHHHTTTSSSEEEHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkell 26 
                 ++++F++fDkDgdG+I+ +Ef++++
  KHJ32981.1 178 VRQAFNHFDKDGDGYIEPDEFQRII 202
                 799******************9985 PP

  == domain 5  score: -3.3 bits;  conditional E-value: 5.1
                 HHHHHHHHT CS
   EF-hand_1   2 lkeiFrefD 10 
                 +++i+re+D
  KHJ32981.1 238 FQNIIREID 246
                 68999**99 PP

  == domain 6  score: 0.0 bits;  conditional E-value: 0.44
                 HHTTTSSSEEEHHHHHH CS
   EF-hand_1   8 efDkDgdGkIdfeEfke 24 
                  +D+  d kI++ +f++
  KHJ32981.1 255 AIDQSEDKKITRTDFLN 271
                 689999********975 PP

  == domain 7  score: -1.9 bits;  conditional E-value: 1.8
                 SSEEEHHHHHHHH CS
   EF-hand_1  14 dGkIdfeEfkell 26 
                 +G++++++f ++l
  KHJ32981.1 300 SGRLSLSDFAKVL 312
                 79*******9876 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       3.1   5.6e+03      12      26 ..      42      57 ..      33      60 .. 0.72
   2 ?    5.0   0.0     0.015        27       5      23 ..      75      93 ..      73      95 .. 0.89
   3 !   12.1   0.1   8.3e-05      0.15       5      27 ..     109     131 ..     105     134 .. 0.90
   4 ?   -3.4   0.0       7.4   1.3e+04      17      27 ..     161     171 ..     159     173 .. 0.84
   5 !   29.4   0.1   2.2e-10     4e-07       2      26 ..     178     202 ..     177     212 .. 0.88
   6 ?    4.0   0.0     0.033        60       7      24 ..     254     271 ..     254     275 .. 0.89
   7 ?    1.6   0.0      0.19   3.5e+02      13      27 ..     299     313 ..     289     323 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 3.1
   EF-hand_6 12 d.gdGkidaeElrkal 26
                d g  +   +E+++a+
  KHJ32981.1 42 DtGEHFMEEKEFIDAI 57
                4466688999**9987 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.015
   EF-hand_6  5 aFklfDkdgdGkidaeElr 23
                +F+  D++++Gk++ ++++
  KHJ32981.1 75 LFHVADRNHTGKVNLSDWI 93
                6999*********999876 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 8.3e-05
   EF-hand_6   5 aFklfDkdgdGkidaeElrkalr 27 
                 aF+lfD++  G++ +++l+k++ 
  KHJ32981.1 109 AFRLFDVNQEGTVKYDDLKKLYE 131
                 8******************9875 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 7.4
   EF-hand_6  17 idaeElrkalr 27 
                 +++ ++ ++lr
  KHJ32981.1 161 LTYPQFCQMLR 171
                 88899****99 PP

  == domain 5  score: 29.4 bits;  conditional E-value: 2.2e-10
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrkal 26 
                 +r+aF++fDkdgdG+i ++E+++++
  KHJ32981.1 178 VRQAFNHFDKDGDGYIEPDEFQRII 202
                 799******************9976 PP

  == domain 6  score: 4.0 bits;  conditional E-value: 0.033
   EF-hand_6   7 klfDkdgdGkidaeElrk 24 
                 k++D++ d ki++ ++ +
  KHJ32981.1 254 KAIDQSEDKKITRTDFLN 271
                 689*************86 PP

  == domain 7  score: 1.6 bits;  conditional E-value: 0.19
   EF-hand_6  13 gdGkidaeElrkalr 27 
                  +G ++ +++ k+l 
  KHJ32981.1 299 PSGRLSLSDFAKVLD 313
                 89**********996 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.059   1.1e+02      29      47 ..      73      91 ..      65      95 .. 0.86
   2 !    9.9   0.1   0.00035      0.62      25      53 ..     103     131 ..      91     133 .. 0.84
   3 !   12.2   0.0   6.8e-05      0.12      28      48 ..     178     198 ..     166     213 .. 0.89
   4 !    7.1   0.1    0.0027       4.9       2      51 ..     261     311 ..     260     313 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.059
   EF-hand_8 29 dilfrefDtdgdGkisfeE 47
                 ilf  +D+++ Gk+++ +
  KHJ32981.1 73 AILFHVADRNHTGKVNLSD 91
                589*************976 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00035
   EF-hand_8  25 eeevdilfrefDtdgdGkisfeEFcvlle 53 
                 + e +i fr+fD ++ G++++++   l+e
  KHJ32981.1 103 DAEYEIAFRLFDVNQEGTVKYDDLKKLYE 131
                 5678999****************999887 PP

  == domain 3  score: 12.2 bits;  conditional E-value: 6.8e-05
   EF-hand_8  28 vdilfrefDtdgdGkisfeEF 48 
                 v+  f++fD dgdG+i  +EF
  KHJ32981.1 178 VRQAFNHFDKDGDGYIEPDEF 198
                 66679***********99999 PP

  == domain 4  score: 7.1 bits;  conditional E-value: 0.0027
   EF-hand_8   2 kgkItreelrrilrilglkk.....glseeevdilfrefDtdg.dGkisfeEFcvl 51 
                 + kItr+++   +     ++     ++++ e dilf  + +d+ +G++s+ +F  +
  KHJ32981.1 261 DKKITRTDFLNHA-----ARitrfsHFTPMETDILFHFASLDEpSGRLSLSDFAKV 311
                 789********55.....44555778**********99999987999999999765 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.089   1.6e+02       4      24 ..      75      95 ..      73      96 .. 0.88
   2 ?    3.5   0.0      0.03        54       4      23 ..     109     128 ..     107     130 .. 0.77
   3 !   23.9   0.1   1.1e-08   1.9e-05       3      24 ..     180     201 ..     178     203 .. 0.89
   4 ?   -2.0   0.0       1.7   3.1e+03      13      24 ..     300     311 ..     300     312 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.089
                HHHHH-SS-SSCE-HHHHHHH CS
   EF-hand_5  4 tFqaiDlNgDGkIskeELktl 24
                +F  +D N+ Gk++ + + t+
  KHJ32981.1 75 LFHVADRNHTGKVNLSDWITF 95
                6999*********99998776 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.03
                 HHHHH-SS-SSCE-HHHHHH CS
   EF-hand_5   4 tFqaiDlNgDGkIskeELkt 23 
                 +F+ +D+N+ G++  + Lk+
  KHJ32981.1 109 AFRLFDVNQEGTVKYDDLKK 128
                 5*******999886666655 PP

  == domain 3  score: 23.9 bits;  conditional E-value: 1.1e-08
                 HHHHHH-SS-SSCE-HHHHHHH CS
   EF-hand_5   3 dtFqaiDlNgDGkIskeELktl 24 
                 ++F+ +D++gDG+I ++E++++
  KHJ32981.1 180 QAFNHFDKDGDGYIEPDEFQRI 201
                 57******************95 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 1.7
                 SSCE-HHHHHHH CS
   EF-hand_5  13 DGkIskeELktl 24 
                 +G++s + + ++
  KHJ32981.1 300 SGRLSLSDFAKV 311
                 7******99886 PP

>> EF-hand_9  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       8.1   1.5e+04      41      54 ..      36      49 ..      30      55 .. 0.67
   2 !    7.2   0.0    0.0035       6.3       3      22 ..      75      94 ..      73     101 .. 0.91
   3 ?    5.3   0.0     0.014        24       3      24 ..     109     130 ..     107     142 .. 0.85
   4 ?   -0.8   0.0       1.1   1.9e+03      42      62 ..     183     202 ..     176     220 .. 0.77
   5 ?   -1.0   0.0       1.3   2.3e+03      32      47 ..     299     315 ..     287     319 .. 0.67

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 8.1
   EF-hand_9 41 akelDPdgedasvd 54
                ++++DPd  +  ++
  KHJ32981.1 36 YAKVDPDTGEHFME 49
                45678887766665 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0035
   EF-hand_9  3 vFevcDtqktGrVpvsrlid 22
                +F+v D++ tG+V +s+ i+
  KHJ32981.1 75 LFHVADRNHTGKVNLSDWIT 94
                7***************9886 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.014
   EF-hand_9   3 vFevcDtqktGrVpvsrlidyL 24 
                  F+++D+++ G+V+  +l+++ 
  KHJ32981.1 109 AFRLFDVNQEGTVKYDDLKKLY 130
                 6*************99998765 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 1.1
   EF-hand_9  42 kelDPdgedasvdldtflrvm 62 
                 + +D dg  + ++ d f+r++
  KHJ32981.1 183 NHFDKDGD-GYIEPDEFQRII 202
                 55666666.888888888887 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 1.3
   EF-hand_9  32 pees.eLeelakelDPd 47 
                 p+    L ++ak lDP 
  KHJ32981.1 299 PSGRlSLSDFAKVLDPS 315
                 44445788999999996 PP

>> Dockerin_1  Dockerin type I domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00034      0.61       2      50 ..      79     126 ..      78     130 .. 0.91
   2 ?   -3.5   0.0       7.1   1.3e+04      36      45 ..     184     193 ..     178     202 .. 0.67
   3 ?    4.3   0.0     0.026        47      25      51 ..     244     270 ..     229     276 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00034
                 TETTSSSC-SHHHHHHHHHHCTSSEBTTSCCCHGGGSTT-SSCESHHHH CS
  Dockerin_1   2 gDVNgDgkVnalDalliinylnqregqssssngkaaDvNgDGrvnalDa 50 
                 +D N  gkVn  D     n l  +++ + ++  + +DvN+ G+v   D+
  KHJ32981.1  79 ADRNHTGKVNLSDWITFDNLLS-KPDAEYEIAFRLFDVNQEGTVKYDDL 126
                 588999****************.99*****************9976665 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 7.1
                 GGSTT-SSCE CS
  Dockerin_1  36 aaDvNgDGrv 45 
                 ++D +gDG +
  KHJ32981.1 184 HFDKDGDGYI 193
                 5566677655 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.026
                 SEBTTSCCCHGGGSTT-SSCESHHHHH CS
  Dockerin_1  25 regqssssngkaaDvNgDGrvnalDal 51 
                 +++    + +ka D ++D +++ +D+l
  KHJ32981.1 244 EIDLVEMIIRKAIDQSEDKKITRTDFL 270
                 5556677788999************98 PP

>> RNB  RNB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   5.9e-06     0.011     102     231 ..      82     258 ..      55     356 .. 0.72
   2 ?   -3.4   0.0       2.6   4.7e+03      72     104 ..     629     676 ..     617     679 .. 0.64

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 5.9e-06
                 xx.xxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....................................xxx RF
         RNB 102 ek.gev.lsveiylsvIkskarltydevqdlleqkdekeekktaedLellyelakalrk.....................................kRl 161
                 ++ g+v ls +i+  +  sk    y+ + +l++ ++e +   + +dL++lyel k+ ++                                     +R 
  KHJ32981.1  82 NHtGKVnLSDWITFDNLLSKPDAEYEIAFRLFDVNQEGT--VKYDDLKKLYELNKRSESipfdwncewtslytggkkhrheltypqfcqmlrglqgERV 178
                 334777777777777777777777777777774444322..2677888888888888888888888888888888875555555555555555555666 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........x RF
         RNB 162 kkgalefdspeikllldedkgnrielkveeetkahslveelmllANelvArflseleipailriheeps...........n 231
                 ++   +f +++ +  +++d+ +ri l++++++ + +l+e+l  l+N   ++++s  ++ a+ +i++e++           +
  KHJ32981.1 179 RQAFNHF-DKDGDGYIEPDEFQRIILQTSKHKLSDHLLENLHTLCNISSGSKISYANVRAFQNIIREIDlvemiirkaidQ 258
                 6666666.46666666666679999****************************************9999444444333330 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.6
                 xxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxx.x RF
         RNB  72 pMLP...............qelsedlcSLnpgedrlalsvlidvdek.g 104
                 ++LP               ++ls++  SL   ++r al +++d+de  g
  KHJ32981.1 629 KLLPlpgtkdnnintknevNKLSDK-NSLSYLRSRNALKIILDLDEGfG 676
                 5555555555555555555666766.57888888888888888887655 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.18   3.2e+02     173     225 ..     348     400 ..     342     408 .. 0.86
   2 ?    6.8   0.2    0.0018       3.2     172     200 ..     543     571 ..     382     597 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.18
  Serine_protease 173 lynkllaGalsGviAtvlttifnsykDkkllaskvengrlltaspftllkqlk 225
                       ++++  G ++G+  +++ +++ + k +   +   + g++l ++++   k++ 
       KHJ32981.1 348 SIHHFGLGSIAGAFGAFVVYPIDLVKTRMQNQRSTRVGQMLYKNSLDCAKKVI 400
                      5678999****************999999999999999999999888777765 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0018
  Serine_protease 172 elynkllaGalsGviAtvlttifnsykDk 200
                      ++y+ l+aGa++G+ A+ ltt+    k +
       KHJ32981.1 543 KIYQLLMAGAIAGMPASYLTTPCDVIKTR 571
                      578899***************99887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (713 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.67u 0.25s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 4895.95
//
Query:       KHJ32982.1  [L=158]
Description: hypothetical protein EV44_g5489 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-14   54.1   0.2    1.5e-14   53.8   0.2    1.2  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.8   0.2   8.6e-19   1.5e-14      13     134 ..      32     157 ..      21     158 .] 0.96

  Alignments for each domain:
  == domain 1  score: 53.8 bits;  conditional E-value: 8.6e-19
  Retrotran_gag_2  13 vlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsalgvkiddedkvvllLasLPesye 106
                       l++++  l++vk+   a  +W++L+++   ++  +++ l + ++++k+++  ++++++n++++  + L + + k++ + + +l L+ L+ +y+
       KHJ32982.1  32 QLCLDNGPLTQVKHINRAQVMWKALENILCATGFCSEFILCRHFYDTKLTKFNTMEEFLNRIKQHSDGLDVKDIKLPRQILFALNLNNLSLDYR 125
                      6899****************************************************************************************** PP

  Retrotran_gag_2 107 tfvtaies....seedltleevieklleeeer 134
                       +vt i +    ++  +t e++ ++ll+e++r
       KHJ32982.1 126 PLVTSITQclrsNKNAFTKESLFSNLLDESKR 157
                      *******99999999**************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.60
# Mc/sec: 796.91
//
Query:       KHJ32983.1  [L=524]
Description: putative eburicol 14 alpha demethylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-75  252.9   0.0    6.4e-75  252.7   0.0    1.0  1  p450      Cytochrome P450


Domain annotation for each model (and alignments):
>> p450  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  252.7   0.0   3.6e-79   6.4e-75       3     454 ..      55     512 ..      52     521 .. 0.91

  Alignments for each domain:
  == domain 1  score: 252.7 bits;  conditional E-value: 3.6e-79
                 SESEHHCCHCHHHHTTTCCHHHHHHHHHHHH-SEEEEEETTEEEEEEESHHHHHHHHCTSTTTTCEESSHHHHHHHHHTTTTSSSTTCGH.HHHHHHHH CS
        p450   3 gptplplvgnllqlgrkeelhevlrklqkkygpifrlklgskpvvvlsgpeavkevlikkgeefsgrpdeallatsrkpfkgkgvlfang.ekwkklRr 100
                  + ++p++g+ + +g    +++++++++ kyg+if++ l +k+v+v+ g +    +l+ k ++++++  +  l+t   p  g++v+f+++ +k +++++
  KHJ32983.1  55 VFHWFPIIGSTISYG--IDPYKFYFDCRAKYGDIFTFILLGKKVTVYLGLQGNNFILNGKLKDVNAEEIYTNLTT---PVFGRDVVFDCPnSKLMEQKK 148
                 45699*********9..78*****************************************999999866666666...********************* PP

                 HHHHHHTSHSTT.THHHHHHHHHHHHHHHHHCCCCHCSEEETHHHHHHHHHHHHHHHHHSSHHHTTTSSHHHHHHHHHHHHHHHHHCHHHHCCCCCHHH CS
        p450 101 fltptltsfgkl.sleelveeeaedlveklrkkagesselditellskaaldvigsilFgarfdlledeklselvkaveelssllskssvqllllfpll 198
                 f+ ++lt   +  s++ +++ e+e  +++  + +ges++++i+++++++++ + +  l g+++    ++    ++  +++l++ l+  ++ ++++f ++
  KHJ32983.1 149 FMKTALTIE-AFhSYVTIIQNEVEAYINNCVSFQGESGTVNISKVMAEITIYTASHALQGEEVR---EN----FDSSFAALYHDLDMGFTPINFTFYWA 239
                 *******99.555************************999999999999998888888888744...33....44455555555566677788888755 PP

                 TCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCHCHCSCSSCSHHHHHHHHCTTCTCTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHH CS
        p450 199 kylptkllrklkeavkklkdlldklieerretldsakksrrdfldalllakkekkgesklsdeelaatvlellfaGvdTtsstlswaLyeLaknPevqe 297
                    p + +r  ++a+++++ +++++i+ rre+ +s  +++ d +  l+ ++  k+g+  + d+e+a+ ++ ll+aG++ +sst+sw++++La +P+++e
  KHJ32983.1 240 ---PLPWNRARDHAQRTVARTYMNIIQARREEKRSG-ENKHDIMWELMRST-YKDGT-PVPDREIAHMMIALLMAGQHSSSSTSSWIMLWLAARPDIME 332
                 ...8888899999999********************.79***********6.66666.***************************************** PP

                 HHHHHHHHHCCTTT...T-HHHHCCT-HHHHHHHHHHHHHSCSSTTEEEEESSSCEEETT..EEE-TT-EEEEEHHHHHT-TTTSSSTTS--GGGGB-T CS
        p450 298 klreEidevlgdkr...eptyddlqklpyldavikEtLRlhpvvplllpRevtkdvvirg..ylipkGtevivnlyalhrdpevfpnPeeFdpeRFlde 391
                 +l+eE  +++g+ +   +++y+dl+kl + ++v+kE+LRlh +++ +++R+v++++ ++g  y+ip   + i +++ +++d ++fp+P + dp+R++  
  KHJ32983.1 333 ELYEEQLRIFGSEKpfpPLQYEDLSKLQLHQNVLKEVLRLHAPIH-SIMRKVKNPMIVPGtkYVIPTSHVLISSPGCTSQDATFFPDPLKWDPHRWDIG 430
                 ************999*99***************************.***************************************************** PP

                 TS..................CTESSCTT--TTEEGGGS-TTHHHHHHHHHHHHHHHHHHEEEEESTSTSGGEEESSC.SSEE CS
        p450 392 kg..................nskrksfaflPFGaGpRnCiGerlArmelklflatlLqnFevelqpetdpppileks.glll 454
                 +g                   s + s  +lPFGaG++ CiGe++A+++l  ++at+++ F++  +++++   + + s  +++
  KHJ32983.1 431 SGkvlgndavdekydygyglTSTGASSPYLPFGAGRHRCIGEQFATLQLVTIMATMVRFFRFRNIDGKQGVVKTDYSsLFSM 512
                 ********************888***************************************98887776555554435555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (524 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       735  (0.040995); expected 358.6 (0.02)
Passed bias filter:                      588  (0.032796); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.40
# Mc/sec: 3924.24
//
Query:       KHJ32984.1  [L=307]
Description: putative histone-arginine methyltransferase carm1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-11   44.6   0.0    4.4e-11   43.3   0.0    1.7  1  Methyltransf_25  Methyltransferase domain
    4.2e-11   42.8   0.0    6.1e-11   42.2   0.0    1.2  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
    2.6e-10   40.3   0.0      6e-10   39.1   0.0    1.5  1  Methyltransf_31  Methyltransferase domain
    2.2e-07   31.4   0.0    8.6e-07   29.5   0.0    1.9  2  Methyltransf_11  Methyltransferase domain
      2e-05   24.6   0.1    3.6e-05   23.7   0.1    1.4  1  Methyltransf_18  Methyltransferase domain
    2.6e-05   24.1   0.0    6.4e-05   22.9   0.0    1.6  2  Methyltransf_23  Methyltransferase domain
    9.6e-05   21.4   0.0    0.00015   20.8   0.0    1.2  1  Methyltransf_9   Protein of unknown function (DUF1698)
    0.00069   19.0   0.0      0.001   18.5   0.0    1.2  1  CMAS             Mycolic acid cyclopropane synthetase
     0.0036   17.2   0.0     0.0065   16.3   0.0    1.5  1  PRMT5            PRMT5 arginine-N-methyltransferase
     0.0059   17.3   0.0      0.013   16.2   0.0    1.6  1  Methyltransf_12  Methyltransferase domain
      0.006   16.1   0.0      0.011   15.3   0.0    1.4  1  MTS              Methyltransferase small domain
  ------ inclusion threshold ------
      0.015   15.2   0.0      0.022   14.6   0.0    1.3  1  PRMT5_C          PRMT5 oligomerisation domain
      0.026   14.5   0.0      0.039   13.9   0.0    1.5  1  Methyltransf_32  Methyltransferase domain
      0.077   12.7   0.1       0.12   12.1   0.1    1.2  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
       0.15   11.7   0.0       0.23   11.1   0.0    1.3  1  Cons_hypoth95    Conserved hypothetical protein 95


Domain annotation for each model (and alignments):
>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.0   3.7e-14   4.4e-11       1      97 []      26     123 ..      26     123 .. 0.88

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 3.7e-14
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT..TEEEEESBCCGBSSSTTTEEEEEEEST.GGGSSHHHHHHHHHHHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl..nvefvqgdaedlpfedgsfDlvvssga.lhhlsdedlekalkeiar 91 
                      vLd+GcGt  l++ + ++ g+++v+gvD+s + +e+are +e +g+  +++++qg++e+++ +  ++D++vs  + + +l ++ l+++l    +
       KHJ32984.1  26 VLDVGCGTAILSMFAVRA-GAKHVIGVDMS-TIIEKAREIVEVNGMsdKITLIQGKMEEIEMPYPKVDIIVSEWMgYFLLYESMLDTVLYARDK 117
                      9**************999.69********9.689*******99999**************************6555666667777888777777 PP

                      HEEEEE CS
  Methyltransf_25  92 vLkpgG 97 
                       L p+G
       KHJ32984.1 118 YLAPNG 123
                      777776 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.0   5.1e-14   6.1e-11     159     233 ..      20      96 ..       7     114 .. 0.82

  Alignments for each domain:
  == domain 1  score: 42.2 bits;  conditional E-value: 5.1e-14
        PrmA 159 vkegeevlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNaelNkveaklevalseellk....eekadvivaN 233
                 + +++ vlDvG+G++iL++ a++ gak+v++vD+  + ++ a+e +e+N++++k+++++ +++ +      k+d+iv+ 
  KHJ32984.1  20 LFKDKIVLDVGCGTAILSMFAVRAGAKHVIGVDMSTI-IEKAREIVEVNGMSDKITLIQ-GKMEEiempYPKVDIIVSE 96 
                 456789****************************876.9**************997742.2222122456899***975 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1   0.0   5.1e-13     6e-10       3     107 ..      22     125 ..      20     132 .. 0.81

  Alignments for each domain:
  == domain 1  score: 39.1 bits;  conditional E-value: 5.1e-13
  Methyltransf_31   3 kglrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgld.nveFeqgdieeleklledekfDlilsn...evlnaladpdk 92 
                      k++ vlD+GCGt  l+  +  ++g  ++v+G+D+s + ie+Are+ + +g +  +++ qg +ee+e+ +   k+D+i+s     +l + + +d 
       KHJ32984.1  22 KDKIVLDVGCGTAILSMFAV-RAG-AKHVIGVDMS-TIIEKAREIVEVNGMSdKITLIQGKMEEIEMPYP--KVDIIVSEwmgYFLLYESMLDT 110
                      6788********77777777.665.488******9.58************999*************6555..7*****9877655566666777 PP

  Methyltransf_31  93 ileeiervlkpggil 107
                      +l    ++l p+g +
       KHJ32984.1 111 VLYARDKYLAPNGLI 125
                      776667777777765 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.0   7.2e-10   8.6e-07       1      94 [.      27     125 ..      27     126 .. 0.86
   2 ?   -1.6   0.0       3.6   4.4e+03      19      34 ..     151     166 ..     143     186 .. 0.73

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 7.2e-10
                      EEET-TTSHHHHHHHHTT.SEEEEEES-HHHHHHHHHHCCHHT-..EEEETTEECCCTSS-TT-EEEEEEES-CCC-...CCHHHHHHHHHHHE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg.arvvgvDlskemlklakekaseegl..kvefvvadaeklpfednsfDlvvssevlhhv...edpekalkeiaRvL 88 
                      LdvGcGt +l+    ++g ++v+gvD+s + ++ a+e ++ +g+  k++++++ +e++ ++  ++D++vs ++  ++     ++ +l    + L
       KHJ32984.1  27 LDVGCGTAILSMFAVRAGaKHVIGVDMS-TIIEKAREIVEVNGMsdKITLIQGKMEEIEMPYPKVDIIVSEWMGYFLlyeSMLDTVLYARDKYL 119
                      8*************************65.567899888888888999**********9888889*******97666666578888888888888 PP

                      EEEEEE CS
  Methyltransf_11  89 kpgGll 94 
                       p+Gl+
       KHJ32984.1 120 APNGLI 125
                      888876 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 3.6
                      SEEEEEES-HHHHHHH CS
  Methyltransf_11  19 arvvgvDlskemlkla 34 
                       +v+g+D+s+  +++ 
       KHJ32984.1 151 DNVYGFDYSPLKRTAL 166
                      5899999998766554 PP

>> Methyltransf_18  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.1     3e-08   3.6e-05      14      95 ..      22     102 ..      11     119 .. 0.82

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 3e-08
  Methyltransf_18  14 kgsrvaDiGtDHgylpiylvkegkakkviasDinegplekakeniekagledkievrlsdGleklk.eee.vdtvviaGmGgel 95 
                      k+++v+D+G+  ++l++++v+ g ak+vi +D++   +eka+e +e +g++dki+++ ++ +e+++ +   vd++v   mG  l
       KHJ32984.1  22 KDKIVLDVGCGTAILSMFAVRAG-AKHVIGVDMS-TIIEKAREIVEVNGMSDKITLIQGK-MEEIEmPYPkVDIIVSEWMGYFL 102
                      5789****************765.78******97.589******************9987.56666454449999888888755 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   5.3e-08   6.4e-05      20      88 ..      20      95 ..       4     128 .. 0.73
   2 ?   -2.8   0.0         4   4.8e+03      44      55 ..     148     161 ..     142     185 .. 0.78

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 5.3e-08
  Methyltransf_23 20 lraggrvLdiGcGtGillevlrengf.svtgvDlspeaveiae.........kakkaqkdqfdeqeaaepqgkfdlIvl 88
                     l++++ vLd+GcGt il+  + + g+ +v+gvD+s + +e+a+          +++ ++ ++  +e++ p  k d+Iv+
       KHJ32984.1 20 LFKDKIVLDVGCGTAILSMFAVRAGAkHVIGVDMSTI-IEKAReivevngmsDKITLIQGKM--EEIEMPYPKVDIIVS 95
                     7899***************998888879******987.777776887777775555555555..455556667777765 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 4
  Methyltransf_23  44 gf..svtgvDlspe 55 
                      gf  +v+g+D sp 
       KHJ32984.1 148 GFwdNVYGFDYSPL 161
                      55568999999984 PP

>> Methyltransf_9  Protein of unknown function (DUF1698)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   1.3e-07   0.00015     109     212 ..      18     121 ..       4     139 .. 0.80

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 1.3e-07
                     GGS.--TT-EEEEET-TTSHHHHHHHHCT-SEEEEE---HHHHHHHHHHHCCTTTTSSEEEE---GGGS-T.---EEEEEE..ES-GGG-S-HHH CS
  Methyltransf_9 109 phlsdlkgrtildvGcgnGyhlwrmvgegaklvvGidPselfliqfeavrkllgedqrahllplgieqlpe.leafdtvfs..mGvlyhrrsPld 200
                     +hl  +k++ +ldvGcg+    +  v +gak v+G+d s++       + ++ g   + +l+   +e+++      d++ s  mG +   +s ld
      KHJ32984.1  18 KHL--FKDKIVLDVGCGTAILSMFAVRAGAKHVIGVDMSTIIEKAR-EIVEVNGMSDKITLIQGKMEEIEMpYPKVDIIVSewMGYFLLYESMLD 109
                     666..89************9999999***********998766555.555788888899999889999987788899988767888888889999 PP

                     HHHHHHCTEEEE CS
  Methyltransf_9 201 hllqlkdqlvkg 212
                     ++l  +d+  + 
      KHJ32984.1 110 TVLYARDKYLAP 121
                     988888775544 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   8.4e-07     0.001      56     133 ..      16      95 ..       7     126 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 8.4e-07
                 TTTT--TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHTS-SSS-EEEEES-GGG---...--SEEEE CS
        CMAS  56 eklelkpGmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakkrvdeldlerkvevklldyedlde...kvdrvvs 133
                 +  +l + + +Ld+GcG   l + av+    +v+g+ +S+   ++a++ v+  ++++k ++   + e+++    kvd +vs
  KHJ32984.1  16 QNKHLFKDKIVLDVGCGTAILSMFAVRAGAKHVIGVDMSTI-IEKAREIVEVNGMSDKITLIQGKMEEIEMpypKVDIIVS 95 
                 55567777889*****************8889*******85.6789***************9999***9996667777777 PP

>> PRMT5  PRMT5 arginine-N-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   5.4e-06    0.0065      65     150 ..      23     102 ..       2     125 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 5.4e-06
                 EEEEEEES-TTSHHHHHHHHHHHHHCCCEEEE.EEEES-HHHHHHHHHHHHHHTTCCGCEEEES-CCCCCHCC.-ECEEEE---BTTB CS
       PRMT5  65 klvilvvGaGRGplvdralkaleetkvtkvki.vavEKnpnavvtLqkkvneekWeekveviksdmrelkaee.kvdllvsELLGSfg 150
                 + ++l vG G   l   a++a +++    v++ +++EK ++ +      v+++  ++k+++i+  m e++++  kvd++vsE +G f 
  KHJ32984.1  23 DKIVLDVGCGTAILSMFAVRAGAKHV-IGVDMsTIIEKARE-I------VEVNGMSDKITLIQGKMEEIEMPYpKVDIIVSEWMGYFL 102
                 45566666666666666666665555.33333144555543.3......34455579**************999***********995 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   1.1e-05     0.013       1      98 [.      27     124 ..      27     125 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.1e-05
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg.ssfDlvv...asnvlhhlkdirevldnir 90 
                      L++GcGt+ l++   ++   ++++gvD s+    +a+e    ++    ++++l +   ++ + +  ++D++v   +  +l +   ++ vl    
       KHJ32984.1  27 LDVGCGTAILSMFAVRA-GAKHVIGVDMSTIIE-KAREIVEVNG--MSDKITLIQGKMEEIEMPyPKVDIIVsewMGYFLLYESMLDTVLYARD 116
                      8************9999.888999*****9766.6666655555..455666666666555444679999997777788888788888888888 PP

  Methyltransf_12  91 klLkpgGr 98 
                      k L+p+G 
       KHJ32984.1 117 KYLAPNGL 124
                      99999997 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   9.2e-06     0.011      31     103 ..      22      95 ..       7      96 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 9.2e-06
                 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTT.TSTTS-EEEEEE CS
         MTS  31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvle.eveekkfdlivs 103
                 +++ vlD+GcG+ +l++ + ++  + +v  vd ++  +e a+e +e n+++  +++++  + e e++  k+d+ivs
  KHJ32984.1  22 KDKIVLDVGCGTAILSMFAVRAGAK-HVIGVDMST-IIEKAREIVEVNGMSdkITLIQGKMEEiEMPYPKVDIIVS 95 
                 45669***********999998877.688888876.4899999999999986655555554442333457777775 PP

>> PRMT5_C  PRMT5 oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   1.9e-05     0.022      65     135 ..     205     272 ..     174     279 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.9e-05
                 EEEEE-SSEEEEEEEEEEEEEE...ETTEEEE-SCCC...--TT-TS---EEEEEEEEEEE-TTEEEEEEEEEE CS
     PRMT5_C  65 lefkikekaeihGlagyFeavL...YkdvelSilPetkeaktkdliSWfpiffPlkkpllvkddselevslwRk 135
                  +  ++++  ih+l+++F+  +   +k +++S+ P+t        + W   +f lk+ l+v+++++++ +l  k
  KHJ32984.1 205 FTLDCRRDDFIHALIAWFDIDFtacHKPIRFSTGPHT------KYTHWKQTVFYLKDVLTVQQGEQIQGTLENK 272
                 5667889999********9766222668*********......6778*******************99887665 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   3.3e-05     0.039      24      93 ..      21      84 ..       5     197 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.3e-05
  Methyltransf_32 24 sgaltvvDvGaGkgYLsfvlalkekeyklkvvgidakeelvekaekraeklgkkfnkrlsfaelsieeat 93
                      +++ v+DvG+G + Ls            +v+g+d+++  +eka+++ e  g  +++++  +++++ee++
       KHJ32984.1 21 FKDKIVLDVGCGTAILSMFAVR---AGAKHVIGVDMST-IIEKAREIVEVNG--MSDKITLIQGKMEEIE 84
                     5677899**********99988...6789******975.7888888887777..6677777777776665 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1    0.0001      0.12      65     128 ..      14      75 ..       4      90 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.0001
                 HHHHTT--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHHHHHHCTTC.SEEE CS
        PCMT  65 alellelkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldle.nviv 128
                 +++  +l k + vL+vG+G+ +l+ ++a   g+k  v++++    ++e+a++ ++ ++++ ++++
  KHJ32984.1  14 ITQNKHLFKDKIVLDVGCGTAILS-MFAVRAGAKH-VIGVDM-STIIEKAREIVEVNGMSdKITL 75 
                 455556888899*******87775.4555556665.9***95.679999**99999988745554 PP

>> Cons_hypoth95  Conserved hypothetical protein 95
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0    0.0002      0.23      26      76 ..       3      57 ..       1      94 [. 0.73

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.0002
                   HHHHH.HHHHHHCCC...HCC-EEEETT-TTSHHHHHHHHTT-SEEEEEES-HHH CS
  Cons_hypoth95 26 drvre.alFnilaae...iegarvLDlfaGsGalglEAlSRgakkavlvekdkea 76
                   d+vr  +  n + ++   ++++ vLD+ +G++ l++ A+  gak+++ v+++   
     KHJ32984.1  3 DEVRTrSYMNAITQNkhlFKDKIVLDVGCGTAILSMFAVRAGAKHVIGVDMSTII 57
                   556641445666666688999*****************************98632 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       484  (0.0269954); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 2121.61
//
Query:       KHJ32985.1  [L=219]
Description: hypothetical protein EV44_g0998 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00048   20.4   0.0    0.00074   19.8   0.0    1.3  1  DUF2358   Uncharacterized conserved protein (DUF2358)
  ------ inclusion threshold ------
       0.19   12.4   0.0       0.29   11.8   0.0    1.3  1  SnoaL_2   SnoaL-like domain


Domain annotation for each model (and alignments):
>> DUF2358  Uncharacterized conserved protein (DUF2358)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   8.2e-08   0.00074      20      86 ..      53     118 ..      42     140 .. 0.77

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 8.2e-08
     DUF2358  20 dysiYsedviFedpltkfkglerYkkilallrflgrlffadvklellkitqseeneikarWtlrgip 86 
                 + ++++++ +F+dplt  kg+++Y+++   l+      +++++ ++l+ t+  + ++k+r +++gi 
  KHJ32985.1  53 KLKLWDDNATFNDPLTMAKGRKQYQAQWYGLKAAFS-EIEQLEATVLSSTNPIDLYVKTRYKVKGIG 118
                 568999*********************444544444.3466666666666666**********9875 PP

>> SnoaL_2  SnoaL-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.2e-05      0.29      18      53 ..      55      90 ..      47     116 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.2e-05
                HTEEEEEEEEETTSEEESHHHHHHHHHHHHHHEEEE CS
     SnoaL_2 18 alfapdvvwedpggelrGreairaffralfaafpdl 53
                 l+++++++ dp+   +Gr++++a++ +l aaf+++
  KHJ32985.1 55 KLWDDNATFNDPLTMAKGRKQYQAQWYGLKAAFSEI 90
                69**********999*********888888766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       309  (0.0172346); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1542.68
//
Query:       KHJ32986.1  [L=756]
Description: putative brf1-like tbp-binding domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-28   99.0   0.2    2.3e-17   62.8   0.0    3.0  3  TFIIB         Transcription factor TFIIB repeat
    2.1e-25   89.0   1.0    2.1e-25   89.0   1.0    3.6  3  BRF1          Brf1-like TBP-binding domain
     0.0034   16.9   1.6      0.012   15.1   1.6    2.1  1  TF_Zn_Ribbon  TFIIB zinc-binding
  ------ inclusion threshold ------
       0.14   12.0   0.3        3.1    7.5   0.0    2.5  2  Cyclin_N      Cyclin, N-terminal domain


Domain annotation for each model (and alignments):
>> TFIIB  Transcription factor TFIIB repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.2   0.1   9.1e-12   4.1e-08       6      68 ..     131     194 ..     126     197 .. 0.86
   2 !   62.8   0.0     5e-21   2.3e-17       1      71 []     224     297 ..     224     297 .. 0.95
   3 ?   -3.4   0.0       2.4   1.1e+04      40      66 ..     585     607 ..     582     611 .. 0.54

  Alignments for each domain:
  == domain 1  score: 33.2 bits;  conditional E-value: 9.1e-12
                 HHTT--HHHHHHHHHHHHHHTTSTTTTSGCTTHHHTTHHHHHHTTT.TSS--HHHHHHHSS--S CS
       TFIIB   6 daleLpekVadaAkelaklaleekvlkGrspagiaAAclyiAcrke.evkrtqkeissvlqVse 68 
                 ++l++ e  +    +++kla+ +++ +Gr+ + +aA cly Acrk+ + + +++++++ +qV++
  KHJ32986.1 131 YQLGIAENTRTVGLQIFKLAAMNNFNQGRRIEMVAAVCLYSACRKAdRCRVMLIDFADKIQVNV 194
                 677777777778889*****************************983567799*******9976 PP

  == domain 2  score: 62.8 bits;  conditional E-value: 5e-21
                 HHHHHHHTT--H...HHHHHHHHHHHHHTTSTTTTSGCTTHHHTTHHHHHHTTTTSS--HHHHHHHSS--SHHH CS
       TFIIB   1 ikrfadaleLpe...kVadaAkelaklaleekvlkGrspagiaAAclyiAcrkeevkrtqkeissvlqVsekti 71 
                 i rfa+ l++     kVad+A  +a++++ +++l Gr+p g+ +Acl +A+r+++++rt +e++ v++V++ ti
  KHJ32986.1 224 IWRFASLLDFDTftnKVADDAIRMAQRMSLDWMLMGRRPSGVCGACLILAARMNNFRRTVTEVVYVVKVTTATI 297
                 568999999887777********************************************************997 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 2.4
                 HTTHHHHHHTTTTSS--HHHHHHHSS- CS
       TFIIB  40 aAAclyiAcrkeevkrtqkeissvlqV 66 
                 aAA +++A + +     qke+s  ++V
  KHJ32986.1 585 AAAHVLLAEKTN----PQKEVSMDVHV 607
                 666666664443....35555555555 PP

>> BRF1  Brf1-like TBP-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   1.9      0.11   4.8e+02      29      84 ..     319     371 ..     316     388 .. 0.41
   2 ?   -7.3   8.4         4   1.8e+04      49      50 ..     505     520 ..     446     574 .. 0.47
   3 !   89.0   1.0   4.6e-29   2.1e-25       2     100 ..     611     710 ..     610     711 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.11
        BRF1  29 nkeyLeeqeekrlkeeaeeaeadkkkkkkkrkrkkkekkkgepetaaeavkkmlek 84 
                 n+e+Le  +      e++e     +kkkk rkrk+  ++++++++++e v+   ++
  KHJ32986.1 319 NNEFLESAHDPPSFYEKSEGF---QKKKKYRKRKRIPSEEPDDNETEERVNYHSKH 371
                 566666433222222222222...22222222222222223334444444433333 PP

  == domain 2  score: -7.3 bits;  conditional E-value: 4
        BRF1  49 e..............a 50 
                 +              +
  KHJ32986.1 505 NndddadididergvE 520
                 1223344444444441 PP

  == domain 3  score: 89.0 bits;  conditional E-value: 4.6e-29
        BRF1   2 diddd.eideyllseeevkiKeriWvelnkeyLeeqeekrlkeeaeeae.adkkkkkkkrkrkkkekkkgep....etaaeavkkmlekkklskkINyd 94 
                 ++ dd e++++lls+++v++Ke++W ++nk++L++q+ k+ +++++++   ++k+++kkr+r  +      +    +++aea+ ++l+++++skkINyd
  KHJ32986.1 611 EFADDpEVQNCLLSPADVAMKEKVWINANKDWLRKQQLKEWNKKHAAKDpPKAKRNRKKRPRIGE---G--QitaaSSPAEAAISVLKQRSFSKKINYD 704
                 566677**********************************9999988882222333333322222...2..13456*********************** PP

        BRF1  95 aLekLf 100
                 a+++Lf
  KHJ32986.1 705 AINGLF 710
                 *****9 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   1.6   2.8e-06     0.012      21      42 ..      58      79 ..      44      80 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.8e-06
                  EESSSSBEEEECCCCCCCHHHH CS
  TF_Zn_Ribbon 21 vCtdCGlVlednsidegpewre 42
                  +C +CGlV++d  i++++++ e
    KHJ32986.1 58 ICHSCGLVMDDSNIVSEITFGE 79
                  8*****************9986 PP

>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.052   2.3e+02      72      96 ..     160     184 ..     146     196 .. 0.76
   2 ?    7.5   0.0    0.0007       3.1      73     104 ..     262     292 ..     235     321 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.052
                 CHHHHHHHHHHHHHHHHSSS---HH CS
    Cyclin_N  72 klqlvgatcLllAaKveeisppkle 96 
                 ++++v+a+cL+ A++  + + + l 
  KHJ32986.1 160 RIEMVAAVCLYSACRKADRCRVMLI 184
                 7899**********86655555544 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0007
                 HHHHHHHHHHHHHHHHSSS---HHHHHHHTTT CS
    Cyclin_N  73 lqlvgatcLllAaKveeisppkledlvyitde 104
                    v+ +cL+lAa++++ +  ++ ++vy+++ 
  KHJ32986.1 262 PSGVCGACLILAARMNNFR-RTVTEVVYVVKV 292
                 556888*********9995.999999999864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (756 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1329  (0.0741257); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.90u 0.28s 00:00:01.18 Elapsed: 00:00:00.46
# Mc/sec: 4897.28
//
Query:       KHJ32987.1  [L=585]
Description: putative crossover junction endonuclease mus81 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-23   82.6   1.0    1.1e-22   80.9   0.2    2.2  2  ERCC4     ERCC4 domain
  ------ inclusion threshold ------
      0.021   14.2   0.1      0.076   12.3   0.1    1.9  2  DnaB_C    DnaB-like helicase C terminal domain


Domain annotation for each model (and alignments):
>> ERCC4  ERCC4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       0.2   1.8e+03      15      62 ..      66     123 ..      52     127 .. 0.74
   2 !   80.9   0.2   1.2e-26   1.1e-22       1     156 []     292     439 ..     292     439 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.2
                 HHTTTSEEEEE--SSS.....SE.EE...CTT.....................EEEEEE CS
       ERCC4  15 leelgvevvietlpig.....dyilwrrkvkaeynleldieepceek......vlverk 62 
                  +++++ ++ ++lp++     ++ + +r+v++  + ++d  ++ ++k      + v+++
  KHJ32987.1  66 TAKMEAYCRKNNLPLPeqktdNS-RRKRNVNTCSETSEDEIDNSPPKkarkakIYVPKY 123
                 56777888888888888888666.88888888888888877777776777777666666 PP

  == domain 2  score: 80.9 bits;  conditional E-value: 1.2e-26
                 EEGGGCT.SHHHH.....HHTTTSEEEEE--SSSSE.EE...CTT....................EEEEEEEHHHHHHHHCCSHHHHHHHHHHH.H-SE CS
       ERCC4   1 iDsrelk.sgieeyl...leelgvevvietlpigdyilwrrkvkaeynleldieepceek.....vlverksaddlvasikdgrleeqvsrlkrngykk 90 
                 +D+re++ ++ ++y+   l ++g+e   +++ +gd+ +w   v++ +++ +    + e +     ++verk++ddl++sikd+r++eq++rl r+g+k+
  KHJ32987.1 292 LDTREVRcKKDRDYIeneLIKKGIEPFKRCMALGDI-TW---VAKVHDPTRLSRLGIEGDeiildYIVERKRLDDLISSIKDKRFHEQKFRLGRSGIKN 386
                 69*****8888888777899****************.**...777777777777777777777*****************************99***** PP

                 EEEEEES-GGGTT................THHH.HHHHHHHHHHHHS-EEEEESSHHHHHHHHHHH CS
       ERCC4  91 pillvegldqykrknknsrnkqykakvrqinrktiesaLvqlqldfgvsilttesanetaewlanl 156
                 +i+l+e  +   r + n            +++ ti s+++ +q+  g ++++t+  ++++e+lan+
  KHJ32987.1 387 VIYLIENITFVPRAHDN------------MDE-TILSIIAGTQIVNGYFVKITQKIEDSIEYLANM 439
                 *******5555554443............444.7*****************************997 PP

>> DnaB_C  DnaB-like helicase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.13   1.2e+03     217     242 ..     106     131 ..      95     135 .. 0.73
   2 ?   12.3   0.1   8.5e-06     0.076      61     132 ..     496     565 ..     448     567 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.13
                 HHHHHCHHCEEEEEEEEETTSXXEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C 217 ykedseekgkaeiiiaKhRnGptgtv 242
                  ++  ++  ka+i++ K R+G+ g +
  KHJ32987.1 106 DNSPPKKARKAKIYVPKYRSGAYGLI 131
                 33333566789**********99865 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 8.5e-06
                 HHHHHHHHHHHHTXXHHHHHHTTSXHHHHHHHHHHHHHHHHSEEEEEEXSSXCHHHHHHHHHHHHHHTTEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C  61 eqlvqRllsseaeidskklrtgklkeedweklteaieelseaklfiddtpaltvseirskarrlkkekglgl 132
                 e+lv R +  +  +  k + tg+ k  +++kl ++ +el++a  +id +++l+++ei++k r+l ++k+ +l
  KHJ32987.1 496 ERLVLRDIFIKMLMCIKGI-TGE-KAMEIQKLWKTPKELAQAYRLIDTEKNLSIEEIKKKKRKLVSSKTNHL 565
                 5566666655555545544.344.45689**********************************988766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       667  (0.0372023); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4072.10
//
Query:       KHJ32988.1  [L=286]
Description: hypothetical protein EV44_g4280 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2124.78
//
Query:       KHJ32989.1  [L=414]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.027   14.2   2.1      0.059   13.1   2.1    1.5  1  zf-C2H2_10  C2H2 zinc-finger
      0.064   13.0   1.2       0.11   12.2   1.2    1.4  1  zf-CCHC_4   Zinc knuckle
       0.14   12.2   1.1       0.31   11.2   1.1    1.6  1  zf-CCHC     Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-C2H2_10  C2H2 zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   2.1   9.8e-06     0.059       1      21 [.     234     254 ..     234     255 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 9.8e-06
  zf-C2H2_10   1 KnkitCSYChetGHtRAkCek 21 
                 K+ i+C +C+  GH+   C+k
  KHJ32989.1 234 KSVIKCNFCNNLGHSIDECRK 254
                 899***********9666666 PP

>> zf-CCHC_4  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.2   1.9e-05      0.11      32      48 ..     237     253 ..     235     254 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.9e-05
   zf-CCHC_4  32 sfCyiCgvlGHsdkrCd 48 
                 ++C  C+ lGHs+++C+
  KHJ32989.1 237 IKCNFCNNLGHSIDECR 253
                 68**************8 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.1   5.3e-05      0.31       1      18 []     237     254 ..     237     254 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.3e-05
                 SCTSSSSSSSSTTTTSTS CS
     zf-CCHC   1 rkCynCGepGHiardCpk 18 
                 +kC  C++ GH   +C k
  KHJ32989.1 237 IKCNFCNNLGHSIDECRK 254
                 59**************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1227  (0.0684366); expected 358.6 (0.02)
Passed bias filter:                      598  (0.0333538); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2898.61
//
Query:       KHJ32990.1  [L=133]
Description: putative vacuolar transporter chaperone 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.1e-17   61.8   2.1    6.1e-17   61.8   2.1    1.8  2  DUF202        Domain of unknown function (DUF202)
  ------ inclusion threshold ------
      0.043   13.1   0.8      0.052   12.8   0.8    1.0  1  Peptidase_U4  Sporulation factor SpoIIGA
        0.2   11.5   0.4       0.62    9.9   0.0    1.8  2  GspL_C        GspL periplasmic domain
       0.41   11.1   3.3       0.27   11.7   1.2    1.7  2  DUF4231       Protein of unknown function (DUF4231)
          2    8.3   9.9      0.064   13.1   3.3    2.0  2  DUF378        Domain of unknown function (DUF378)


Domain annotation for each model (and alignments):
>> DUF202  Domain of unknown function (DUF202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.8   2.1   1.7e-20   6.1e-17       1      67 [.      24      85 ..      24      86 .. 0.96
   2 ?   -0.4   0.1      0.46   1.7e+03      43      51 ..     105     113 ..      92     121 .. 0.54

  Alignments for each domain:
  == domain 1  score: 61.8 bits;  conditional E-value: 1.7e-20
      DUF202  1 rdglAnERTfLaWlRtslalialglallrffltgepsalgkilglilivlgiltllvglvrylrrqr 67
                ++++AnERTfL+Wl +s++l+al++++l+f   g++++  +i ++i+iv+++  ++++l++y++r++
  KHJ32990.1 24 KVFFANERTFLSWLNFSVVLGALAVGMLNF---GDQTS--FISAIIFIVVAVSGMIYALYTYHWRAK 85
                689**************************9...88888..9***********************987 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.46
      DUF202  43 lglilivlg 51 
                 +++++i+++
  KHJ32990.1 105 AAALIIAIT 113
                 222333333 PP

>> Peptidase_U4  Sporulation factor SpoIIGA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.8   1.5e-05     0.052      61     143 ..      32     127 ..      21     131 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.5e-05
  Peptidase_U4  61 sillkilvsllmvliafgpkslkeflkalllfylvsfllgGilfalsylllkskn.............llvlllgalvaylllkllvkiikkkkkk 143
                   ++l+++ +s+++  +a g  ++ +    +  ++++ ++++G+++al+ + +  k+               ++l +al++ + ++++++ii+  k++
    KHJ32990.1  32 TFLSWLNFSVVLGALAVGMLNFGDQTSFISAIIFIVVAVSGMIYALYTYHWRAKSirrrgqagfddkvGPTILAAALIIAITVNFVLRIIEAPKQE 127
                   445555555555555556666666666666677778999*******99664444466667777888888899999999999999999999876665 PP

>> GspL_C  GspL periplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00017      0.62      12      44 ..      60      92 ..      56     102 .. 0.88
   2 ?   -0.8   0.1      0.33   1.2e+03      10      35 ..     101     126 ..     100     129 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00017
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
      GspL_C 12 illalallvvvaerllqlyqlerqaqalraqse 44
                i + ++++v+v +++++ly++ + a++ r+  +
  KHJ32990.1 60 ISAIIFIVVAVSGMIYALYTYHWRAKSIRRRGQ 92
                78899*********************9998765 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.33
                 XXXXXXXXXXXXXXXXXXXXXXXXXX CS
      GspL_C  10 vaillalallvvvaerllqlyqlerq 35 
                 + il+a+++++ +++ +l +    +q
  KHJ32990.1 101 PTILAAALIIAITVNFVLRIIEAPKQ 126
                 56899999999999988877666555 PP

>> DUF4231  Protein of unknown function (DUF4231)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   1.2   7.6e-05      0.27      15      75 ..      32      86 ..      28      93 .. 0.84
   2 ?   -1.4   0.0       0.9   3.2e+03      28      33 ..     107     112 ..      96     126 .. 0.52

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 7.6e-05
     DUF4231 15 rrfrllrlitivlgallpilvssklgagvsvlkiltallsalvailaaleeffrykerWrr 75
                ++  +l++  ++++  + +l+       ++++ +++a++ ++va++  + +++ y+ r + 
  KHJ32990.1 32 TFLSWLNFSVVLGALAVGMLNF------GDQTSFISAIIFIVVAVSGMIYALYTYHWRAKS 86
                5667899999999999999999......9*********************99999866555 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.9
     DUF4231  28 gallpi 33 
                 + +++i
  KHJ32990.1 107 ALIIAI 112
                 112222 PP

>> DUF378  Domain of unknown function (DUF378)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   3.3   1.8e-05     0.064      33      56 ..      53      76 ..      34      80 .. 0.86
   2 ?   -3.1   0.5       2.1   7.4e+03      12      14 ..     110     112 ..     103     121 .. 0.48

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.8e-05
      DUF378 33 fggessllsriiYilVglaglyli 56
                fg+++s++s ii+i+V+++g++  
  KHJ32990.1 53 FGDQTSFISAIIFIVVAVSGMIYA 76
                999*****************8654 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.1
      DUF378  12 iiG 14 
                 i  
  KHJ32990.1 110 IAI 112
                 222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       758  (0.0422779); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 981.30
//
Query:       KHJ32991.1  [L=237]
Description: hypothetical protein EV44_g4833 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-08   33.4   0.4    5.3e-08   32.6   0.4    1.5  1  Alba      Alba


Domain annotation for each model (and alignments):
>> Alba  Alba
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.4   2.9e-12   5.3e-08       3      64 ..      88     160 ..      86     163 .. 0.93

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 2.9e-12
                 EEE-STS-HHHHHHHHHHHH.......THTTESEEEEEEETTHHHHHHHHHHHHHHHTCT....T.EEEEEEE CS
        Alba   3 iyVsskspimsyvkralklL.......snkkeeeVvlkatGraIskAvsvaeilkrrfgk....glyqvnvlt 64 
                   ++s s+i+  v +al+ L        + k++ V+l a  +a +k++s++ei+kr++      ++yq+n+l 
  KHJ32991.1  88 LNIKSASKIHAKVVQALEVLssfpaigAGAKHGLVLLEAKSNACCKMISIVEIIKRQIVQemqgKWYQYNTLE 160
                 679999*********************999****************************77999*******997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       704  (0.039266); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1761.50
//
Query:       KHJ32992.1  [L=543]
Description: hypothetical protein EV44_g6524 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.016   15.4   0.0      0.032   14.4   0.0    1.5  1  CH        Calponin homology (CH) domain
      0.042   13.3   0.1      0.078   12.5   0.1    1.4  1  KNOX2     KNOX2 domain


Domain annotation for each model (and alignments):
>> CH  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   3.5e-06     0.032      23      94 ..     439     516 ..     429     530 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.5e-06
                 TTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT.......HHHHHHHHHHHHHHHHHHTTCHTTSS.-HHHHHTTSHH CS
          CH  23 kvedfeedlrDGvlLckLlnklapglvdkkklnks.......efkkleNinlaldvaekklgvpkvli.eaedlvegknk 94 
                  +++f  dl +G+ L k+ n++  ++ +      +       ++++ eN++ ++++ae  l+++ vl  +++ +v+g n+
  KHJ32992.1 439 LPSEFLADLMTGLRLVKIHNAVVRKSKRPFGAIGRwhtdfrkPYRCTENLRFWIKAAE--LRFEVVLDvDVTSIVHGANR 516
                 45899*****************77664444433337888889*************555..77777776699999997665 PP

>> KNOX2  KNOX2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   8.7e-06     0.078      19      48 .]     243     272 ..     240     272 .. 0.95

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 8.7e-06
       KNOX2  19 LvkYkeeLtrpveEAteFlreieqqLqsLt 48 
                 L + keeL++++  A++ l ei++ L+s+t
  KHJ32992.1 243 LEELKEELEKTLLDAKTVLDEIKSDLSSIT 272
                 7889************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (543 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       815  (0.0454571); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.20s 00:00:00.74 Elapsed: 00:00:00.37
# Mc/sec: 4450.44
//
Query:       KHJ32993.1  [L=588]
Description: putative monooxygenase fad-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.6e-71  239.9   0.0    7.5e-69  232.6   0.0    2.1  1  FAD_binding_3  FAD binding domain
     0.0026   17.4   0.1      0.013   15.1   0.0    2.2  3  DAO            FAD dependent oxidoreductase
     0.0044   15.8   0.1      0.036   12.8   0.0    2.0  2  HI0933_like    HI0933-like protein
     0.0064   17.0   0.1       0.37   11.4   0.0    2.4  2  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.013   14.8   0.1      0.081   12.1   0.0    2.3  3  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
      0.024   13.9   0.0       0.04   13.2   0.0    1.3  1  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
      0.037   14.3   0.0      0.081   13.2   0.0    1.6  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain
      0.051   12.6   0.0       0.23   10.5   0.0    1.9  2  SE             Squalene epoxidase
        0.2   10.6   0.0        1.1    8.3   0.0    2.0  2  Lycopene_cycl  Lycopene cyclase protein


Domain annotation for each model (and alignments):
>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  232.6   0.0   3.8e-72   7.5e-69       1     347 [.       2     387 ..       2     389 .. 0.85

  Alignments for each domain:
  == domain 1  score: 232.6 bits;  conditional E-value: 3.8e-72
                    EEEEEEE--SHHHHHHHHHHHHTTHHEEEEESS..SSSCCSSS--EEEHHHHHHHHHTT-HHHHHHHSEECCCCEEEEEEE.CCCCCEEEEEHHCH CS
  FAD_binding_3   1 etdVlIVGaGpaGlmlallLseaGvrvvlvekr..sttvvlpradglnqrtmellrqlGledrilaegapnelmgealyne.lsdtpkaradlele 93 
                    +t+VlIVGaGp+Glmlal+Ls +Gv  ++++    ++ ++++ra ++++rt+ell    l++r+ ++g+ ++ ++++l  + l ++++ r  +  +
     KHJ32993.1   2 DTSVLIVGAGPTGLMLALELSLHGVPFRIIDANvtAKPSYQSRALVIHSRTLELLARHDLAERFMSNGSFSDEVHIFLHRSfLWKIKNTRNLMG-D 96 
                    689****************************96226788999***********************************99996556688888888.9 PP

                    HCST-CEE--HHHHHHHHHHHHHHHTEEETCSEEEECCEECCCC..CCCEEE.............................ECCTTEEEEEEEEEE CS
  FAD_binding_3  94 sspervtvypqteleriLvehaeerglqvrfktevesleqdeeg..vtaevr.............................dketgeeetvrakYl 158
                    + ++++ ++ q+  e++L+e+++  g +v+++   e++  d++g  v+  +r                             +++++ee+ +++kY+
     KHJ32993.1  97 TVYPDPVTVKQPIAEKYLEERLKDYGGKVEKGVSAENIVVDGDGegVSVWIRrkklapgsnedykdggedknqnedqnedqNEDQNEERLIKCKYV 192
                    **************************9999999988877666550055555699*********9999999998887777544444455789***** PP

                    EE--GTT-HHHHHHTGGEEEEEEEEEEEEEEEEEEC-SCCCTTC.......CEEEEECCTTEE........EEEECCETEEEEEEEEECCE-GGGS CS
  FAD_binding_3 159 vGaDGgrStvrktlgiefegeetvyeagvldvlfdadlsdivep.......lvlilsaesrgv........mviPlentlerfyvqvearaekeer 239
                    vG+DG++S vr+ +gi+feg++ + e  ++d+ ++ d + i +        + +        +         ++  +   +r ++ + ++ + + r
     KHJ32993.1 193 VGCDGMHSVVRSFAGINFEGTSYTDEYILADARVEWDNQ-IGSYffigrglMAF--------LplggkdlyRIVCKRPSPRRSLFSAFWSHPPTLR 279
                    **********************77666666666555544.33334444555444........3555555556655555688889999999999999 PP

                    CCCHHHHHHHHHHHHHHTTSSCEEEEEEEEEEEEEEEEESSSEETTEEE-GGGTEEE-STTSHHHHHHHHHHHHHHHHHHHHHTTSS-GGGGHHHH CS
  FAD_binding_3 240 sekfteeevkarlreivgektldveieevsawtvaqrvaekyrkgrvflaGDAaHihpPtgGqGlNtaiqDavnLawkLaavlkGeAkeelLdtYe 335
                    + + +  e    + ++  ++   +++++ s++++++r+a++y+ gr+flaGDAaH+h P+gGqG+N +iqDavnL+wkLa vl+ +A ++lL++Ye
     KHJ32993.1 280 QREPEIHEFNSSIAALLPSPIQIHNPTWLSTFRINSRLASTYNVGRLFLAGDAAHVHAPVGGQGMNCGIQDAVNLGWKLARVLRSTAPKSLLNSYE 375
                    999999999999999999999999************************************************************************ PP

                    HHHHHHHHHHHH CS
  FAD_binding_3 336 eerravaqavvd 347
                     err++a  +v+
     KHJ32993.1 376 IERRKIADVTVR 387
                    ******998776 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   6.8e-06     0.013       2      32 ..       5      36 ..       4      66 .. 0.81
   2 ?   -1.3   0.0      0.64   1.3e+03     129     183 ..      91     144 ..      48     200 .. 0.76
   3 ?   -2.6   0.0       1.5     3e+03      91     139 ..     419     462 ..     374     480 .. 0.59

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 6.8e-06
                EEEECTSHHHHHHHHHHHHTT..EEEEESSSST CS
         DAO  2 vviiGGGiiGlstAyeLarrg..Vtllekgdia 32
                v+i+G+G +Gl  A+eL+ +g    +++++   
  KHJ32993.1  5 VLIVGAGPTGLMLALELSLHGvpFRIIDAN-VT 36
                99******************9888888888.44 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.64
                 TTTSEEEEETTEEEEEHHHHHHHHHHHHHHTT-EEEESECEEEEEEEETCEEEEE CS
         DAO 129 pgllgalfypdtgqvdpakltaalaraaealGveilegtevtgleeedgkvwgve 183
                 ++l+g  +ypd  +v    + ++l +++++ G+++ +g  ++++   dg++ gv 
  KHJ32993.1  91 RNLMGDTVYPDPVTVKQPIAEKYLEERLKDYGGKVEKGVSAENIVV-DGDGEGVS 144
                 4677778888888887777778888889999999999988888843.55556663 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 1.5
                 SSHHHHHHHHHHHHHHHHTTTTEE.EEEHHHHHHHSTTSTTTSEEEEETT CS
         DAO  91 adeeelealdkllallleagldae.lldaeevrelepalpgllgalfypd 139
                  d+++ +++++++ +l+   ++ + +++ +   +++    +l+g+   pd
  KHJ32993.1 419 GDSKSADKIRRRISQLS-IRYRDSpIVNTS--SKWKG---KLRGGDRAPD 462
                 44444555544444432.222111133332..23332...3444444444 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   1.8e-05     0.036       2      32 ..       4      34 ..       3      38 .. 0.90
   2 ?    0.5   0.0     0.094   1.9e+02     364     394 ..     312     342 ..     308     353 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.8e-05
                 SEEEE--SHHHHHHHHHHHHTT--EEEE-SS CS
  HI0933_like  2 dviviGgGaAGlmaAisaakrgkrVllleka 32
                 +v+++G+G+ Glm A++++ +g    +++++
   KHJ32993.1  4 SVLIVGAGPTGLMLALELSLHGVPFRIIDAN 34
                 699*******************999999987 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.094
                  GB-TTT-BBTTSTTEEE-GGGBSEEE-TTTH CS
  HI0933_like 364 evssktmeskkvpgLffaGEvlDvegvtGGy 394
                   ++s+   + +v  Lf+aG    v++++GG 
   KHJ32993.1 312 RINSRLASTYNVGRLFLAGDAAHVHAPVGGQ 342
                  6788888888999****************95 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   0.00019      0.37       1      30 [.       4      33 ..       4      45 .. 0.86
   2 ?    3.0   0.0     0.075   1.5e+02      42      77 ..     110     144 ..     105     150 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00019
                EEEEECSSHHHHHHHHHHHHTTSEEEEEES CS
   Pyr_redox  1 kvvvvGgGyiglElAgalaelgkkVtvver 30
                +v++vG+G +gl+lA +l+ +g    ++++
  KHJ32993.1  4 SVLIVGAGPTGLMLALELSLHGVPFRIIDA 33
                699***************999988888776 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.075
                 HHHHHHHHHHHTTEEEECSEEEEEEEEETTSEEEEE CS
   Pyr_redox  42 askilqeklekngievllntkveeiegsedgvesvk 77 
                 a+k+l+e+l++ g +v  + ++e+i+ ++dg e+v 
  KHJ32993.1 110 AEKYLEERLKDYGGKVEKGVSAENIVVDGDG-EGVS 144
                 7899**********************99998.5554 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0     4e-05     0.081       2     175 ..       4      35 ..       2     148 .. 0.78
   2 ?   -2.0   0.0      0.85   1.7e+03     218     240 ..     178     201 ..     157     226 .. 0.60
   3 ?   -1.4   0.0      0.53   1.1e+03     260     279 ..     313     337 ..     307     353 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4e-05
                  SEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHHHHHHCHHHHCCCCHCCTCEEEEESCEEEEETEEECTCEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcllskallgvaedaeiasevvkklnqgielllgeevvkidpgkkkvklekkkegdeekia 99 
                  +v+++G+Gp Gl +al+l+ +g+   +++                                                                     
   KHJ32993.1   4 SVLIVGAGPTGLMLALELSLHGVPFRIID--------------------------------------------------------------------- 32 
                  56677777777777777776666666663..................................................................... PP

                  ESEEEE---EEE-BCTCTTC.TTBEECCSECHHHHHHCCSS-TSEEEEES-SHHHHHHHHHHHHHT-EEEEEESSS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 100 ydklvlAtGssprdlgipGvaenvgklvrtldsaealklkllpkrivvvGgGyiGvElAaalaklgkevtlveard 175
                                                                                           a+ 
   KHJ32993.1  33 -------------------------------------------------------------------------ANV 35 
                  .........................................................................322 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.85
                  EEETTSCE...EEESEEEE-S-EEES CS
                  xxxxxxxx...xxxxxxxxxxxxxxx RF
  Pyr_redox_2 218 vvledgee...idadlvvvavGvrps 240
                   ++++  e   i++++vv + G+   
   KHJ32993.1 178 NEDQN--EerlIKCKYVVGCDGMHSV 201
                  22222..2346888888877777654 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.53
                  --TTSBE..SSTTEEE-GGGC...T CS
                  xxxxxxx..xxxxxxxxxxxx...x RF
  Pyr_redox_2 260 vdeflrt..nvpgiyaiGDva...g 279
                  ++++l++  nv  ++++GD a    
   KHJ32993.1 313 INSRLAStyNVGRLFLAGDAAhvhA 337
                  667775434799*******995540 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0     2e-05      0.04       1      30 [.       6      34 ..       6      51 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2e-05
  Pyr_redox_3  1 iIiGaGPaGlaaaielkkagledylilEkg 30
                 +I+GaGP Gl  a+el  +g+  + i++ +
   KHJ32993.1  6 LIVGAGPTGLMLALELSLHGV-PFRIIDAN 34
                 6********************.89**9987 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   4.1e-05     0.081       1      27 [.       7      33 ..       7      40 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 4.1e-05
                   EE--SHHHHHHHHHHHCCTEEEEEE-S CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagfdvlllek 27
                   IvGaG +Gl +A +L+ +g+   ++++
     KHJ32993.1  7 IVGAGPTGLMLALELSLHGVPFRIIDA 33
                   9******************99999997 PP

>> SE  Squalene epoxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.35   6.9e+02       4      41 ..     191     227 ..     188     234 .. 0.71
   2 ?   10.5   0.0   0.00011      0.23     125     194 ..     319     385 ..     305     412 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.35
          SE   4 ltvvcDGifsklRkelsdnkvevtssfvGlvlknaelp 41 
                   v cDG++s +R ++   + e ts+   ++l +a+++
  KHJ32993.1 191 YVVGCDGMHSVVR-SFAGINFEGTSYTDEYILADARVE 227
                 5688******887.666666666777766666666665 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00011
          SE 125 sknekkGlillGDalnmRHPltggGmtvalnDivllskllkpledlsdeekvleelksfyvkRkeldavv 194
                 s+ ++  l l GDa  +  P+ g Gm  +++D+v l   l  +  l+ + +  + l+s+ ++R++++ v 
  KHJ32993.1 319 STYNVGRLFLAGDAAHVHAPVGGQGMNCGIQDAVNLGWKLARV--LR-STAPKSLLNSYEIERRKIADVT 385
                 45556668899***********************998888777..33.3344566777877777765543 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0   0.00054       1.1       2      32 ..       5      33 ..       4      45 .. 0.84
   2 ?   -0.8   0.0       0.3   5.9e+02     195     242 ..      88     135 ..      80     141 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00054
  Lycopene_cycl  2 vvviGaGpAglslAarlteakpglkvvliea 32
                   v+++GaGp gl lA +l  +  g+   +i+a
     KHJ32993.1  5 VLIVGAGPTGLMLALEL--SLHGVPFRIIDA 33
                   89***************..777777777765 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.3
  Lycopene_cycl 195 dsdrllvEeTelaskpeLpadalkkrlaaylralglkvkevveeEqgv 242
                    +++r l+ +T + +   +++   +k l ++l++ g kv++ v++E+ v
     KHJ32993.1  88 KNTRNLMGDTVYPDPVTVKQPIAEKYLEERLKDYGGKVEKGVSAENIV 135
                    57888999****99999999999999*******999999999999866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.62u 0.24s 00:00:00.86 Elapsed: 00:00:00.38
# Mc/sec: 4596.74
//
Query:       KHJ32994.1  [L=232]
Description: putative diphthine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-12   47.9   0.0    4.3e-12   46.4   0.0    1.6  1  TP_methylase  Tetrapyrrole (Corrin/Porphyrin) Methylases


Domain annotation for each model (and alignments):
>> TP_methylase  Tetrapyrrole (Corrin/Porphyrin) Methylases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.4   0.0   2.4e-16   4.3e-12      77     213 .]      13     182 ..       3     182 .. 0.73

  Alignments for each domain:
  == domain 1  score: 46.4 bits;  conditional E-value: 2.4e-16
  TP_methylase  77 ragkdVvllvsGDPlvygtgselvealrareagieveviPGvsslqaaaarlgiplteggevlsvl......lpglakeeereleallan....gdt 163
                   ++  d+++lv GDP+ ++t+  lv  lrar+ +i+v +iP  s+++a+   +g+ l+++g+++s +      +      + + ++++ +n     +t
    KHJ32994.1  13 AQTVDIAFLVVGDPFGATTHTDLV--LRARASHIPVSIIPNASIMSAI-GVTGLQLYNFGQTVSMVfftetwK------PTSFYNRIRENrkigLHT 100
                   45679*******************..77777***********998766.567777777766666666855532......55555555555555579* PP

  TP_methylase 164 lvll...............................kaprklaelaelLkea.lyddttpvavveragtedervvrgtleela 213
                   l+ll                               ++  ++++++++  e  +y ++  ++ v+r+g + e++v gtle+l+
    KHJ32994.1 101 LLLLdikvkeaslenlvrgrriydpprymtvgqcaMQMLEVENIMTEKGEGgVYSKDSLAVGVARVGGATEKIVCGTLEQLC 182
                   ****77777777777777766654444444433333333366666666777*999999*********************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       248  (0.0138323); expected 358.6 (0.02)
Passed bias filter:                      235  (0.0131073); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1970.81
//
Query:       KHJ32995.1  [L=302]
Description: putative developmental regulator protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       674  (0.0375927); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.35
# Mc/sec: 2604.39
//
Query:       KHJ32996.1  [L=636]
Description: putative ribonuclease f1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (636 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4434.67
//
Query:       KHJ32997.1  [L=430]
Description: putative mgs207 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-91  307.3   0.5      2e-91  307.1   0.5    1.1  1  Questin_oxidase  Questin oxidase-like


Domain annotation for each model (and alignments):
>> Questin_oxidase  Questin oxidase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  307.1   0.5   1.1e-95     2e-91       1     339 [.      74     387 ..      74     388 .. 0.91

  Alignments for each domain:
  == domain 1  score: 307.1 bits;  conditional E-value: 1.1e-95
  Questin_oxidase   1 fhNHlpHhllAlyalGAsaeqlqaaYeenasyqrpaepspekiteenwrdhLgdeeyyrayldFFedele.e..kgwkevleeylfsnegaeel 91 
                      fhNH+pH l ++y lGA+ eql+++Y++++++  p +psp +it ++wr++L d++y+ray+dFFedel+ +  ++w+++++eylf  +g+e+l
       KHJ32997.1  74 FHNHMPHLLGSAYILGADVEQLHNIYDKESKELAPWSPSPAEITSKEWRNFLSDKRYQRAYIDFFEDELAlKfhYNWRDLVNEYLF--HGEEPL 165
                      9*********************************************************************669*************..99**** PP

  Questin_oxidase  92 lsrlfggllHPlIhlGyglefgqpalvaegLAqaavhydsdpse.llsae.aassraessegsslleilerilkderldaa.arpgnedddkir 182
                      ++++ +gl+HPlIhl+y++e++ ++l++e+LAqa+++y + + + l++++ ++   + + +++s+l+il++i++d+r+d+  ++pg+      +
       KHJ32997.1 166 INGITSGLGHPLIHLAYAFELSCKELAIEALAQASLEY-DFMHKyLDDPSyTKP--STTFTSTSPLKILQKIHDDTRFDNIfTQPGPT----NI 252
                      **************************************.666655666553444..4567788*****************98888644....45 PP

  Questin_oxidase 183 dgvlkraadeileyanawkvseeedkeeleekleeliwaatllyaaaglkkepkkpkyDFflmHlvTsslalrsllallpsklspeskarllra 276
                      + ++++ ++++ley+n+w++   e   +  e+++++++ a++l++   ++ e ++ k+DFfl+H++T+s+a+r+ll+l+p++++ +    l+r+
       KHJ32997.1 253 EPLFSQCENQVLEYWNSWTI---E---NPIEQFKDSQNDAITLLTQ--TV-ESGHNKFDFFLVHILTTSHAIRILLPLIPPRFHLN----LVRQ 333
                      667778899***********...4...2589*********999995..44.47999*************************99999....**** PP

  Questin_oxidase 277 ywrlvllvyvargrpeldldsikeyksaseaelkkgndwktviqrsasaikhdDeHviKlvra 339
                      +w+l+++vy+a++rp ++ + +         el  ++dw++v +++ + ++++D+H++K++ra
       KHJ32997.1 334 WWLLTIAVYIAQLRPVIRNNPV---------ELPPNKDWNYVQNQAIRGTWSKDAHYVKAIRA 387
                      ****************994444.........55679*********88899************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       371  (0.0206927); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 3300.68
//
Query:       KHJ32998.1  [L=332]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       718  (0.0400469); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2436.23
//
Query:       KHJ32999.1  [L=874]
Description: putative cell cycle checkpoint protein rad17 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-29  101.3   0.0    1.3e-28  100.2   0.0    1.6  1  Rad17     Rad17 P-loop domain
    0.00015   22.2   0.1     0.0004   20.8   0.1    1.7  1  AAA_16    AAA ATPase domain
    0.00053   20.4   0.0     0.0022   18.4   0.0    2.0  1  AAA       ATPase family associated with various cellular acti
     0.0008   20.0   0.0     0.0018   18.8   0.0    1.6  1  AAA_18    AAA domain
     0.0055   17.0   0.7      0.029   14.6   0.7    2.1  1  AAA_22    AAA domain
  ------ inclusion threshold ------
      0.024   14.8   0.0      0.043   14.0   0.0    1.4  1  AAA_33    AAA domain
      0.045   13.7   0.1       0.11   12.6   0.1    1.6  1  AAA_5     AAA domain (dynein-related subfamily)
      0.051   14.0   0.0       0.12   12.8   0.0    1.7  1  AAA_17    AAA domain
      0.093   12.7   0.0       0.21   11.6   0.0    1.5  1  TsaE      Threonylcarbamoyl adenosine biosynthesis protein Ts
        0.1   12.5   0.1       0.27   11.1   0.1    1.7  1  NACHT     NACHT domain


Domain annotation for each model (and alignments):
>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.2   0.0   7.1e-32   1.3e-28       4     163 ..     208     368 ..     205     393 .. 0.88

  Alignments for each domain:
  == domain 1  score: 100.2 bits;  conditional E-value: 7.1e-32
       Rad17   4 denelWfekykPekaeelavhkkkieevkewlkadvLesrkkriLLisGPsGCgkstvvkvLskelgiklrewlnpvslkepdnqksdfkgltekesrf 102
                 ++   W e++ P   +elavhk+k+ +vk+wl+  +  +  +r+LL+ G sGCgk+t+++ L+  lg ++ ew npv    p    +  +++  ++++f
  KHJ32999.1 208 NGSRTWAERFAPVNFQELAVHKRKVADVKKWLEDVFGGKTSQRLLLLKGVSGCGKTTTLRLLAESLGCQVLEWRNPVG---PLASSDGCLSMSAQFDEF 303
                 56789*************************************************************************...999999************ PP

       Rad17 103 lsqiesfkeleLkdakylklqk.lGddlrtdkklilvedlPnkfyrds...dalrevirkylrss 163
                 l +   +  l +        +  + ++++  k++ilve++P++    s   +a++  i++yl+++
  KHJ32999.1 304 LGRGGIYGQLDISPVLEAASSVkKKNKMHERKSIILVEEFPSNLSSTSitlQAFQSSILQYLTTQ 368
                 99999999998776655544440445678899*********666543323499*********976 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.1   2.2e-07    0.0004       9      63 ..     232     303 ..     225     393 .. 0.73

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 2.2e-07
      AAA_16   9 leqLlsalervrsgrp..elvllsGesGvGKsslvrellralekd...............ggiflrgkcdql 63 
                 ++ ++  le+v  g +  +l+ll G sG+GK++ +r l+++l  +               g++ +++++d++
  KHJ32999.1 232 VADVKKWLEDVFGGKTsqRLLLLKGVSGCGKTTTLRLLAESLGCQvlewrnpvgplassdGCLSMSAQFDEF 303
                 666777788899999999**********************99877666666666666664455566666666 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   1.2e-06    0.0022       1      92 [.     252     368 ..     252     385 .. 0.60

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1.2e-06
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTT..CSSS...................STTHHHHHHHHHHHHH...HHTS....TSEEEEEETGGGHH CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgse..llsk...................yvgesekkirelfkea...keka....kpsilfiDEidala 71 
                 +ll G  G+GKT++ + +a++lg ++le   +   l s+                   y   ++ +i+ ++++a   k+k+    ++si++++E+ +  
  KHJ32999.1 252 LLLKGVSGCGKTTTLRLLAESLGCQVLEWRNPVgpLASSdgclsmsaqfdeflgrggiY---GQLDISPVLEAAssvKKKNkmheRKSIILVEEFPSNL 347
                 6999******************9886665543211222234444555555555555552...2333333333332213333555445788888888777 PP

                 HHHTTCCCHHHHHHHHHHHHH CS
         AAA  72 ksrsgseseeeervvnqLlte 92 
                 +s s + + +++++++ L t+
  KHJ32999.1 348 SSTSITLQAFQSSILQYLTTQ 368
                 777566666666666666555 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0     1e-06    0.0018       2      90 ..     253     351 ..     252     373 .. 0.72

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1e-06
      AAA_18   2 lltGtpGvGKttlakeLskrlgf.....gvnlrdvakenglllevdpe.....aldeskrldedkldklldaleenssaleegknlvidghlaelesea 90 
                 ll G++G+GKtt  + L+++lg+        ++ +a+ +g+l +  ++         + +ld+  + ++ + +++ ++  e  + ++++ ++++l s++
  KHJ32999.1 253 LLKGVSGCGKTTTLRLLAESLGCqvlewRNPVGPLASSDGCLSMSAQFdeflgRGGIYGQLDISPVLEAASSVKKKNKMHERKSIILVEEFPSNLSSTS 351
                 578*************************99999999999999999998666663333444444444555555555554333345557888887777665 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.7   1.6e-05     0.029       4      29 ..     248     273 ..     246     394 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.6e-05
      AAA_22   4 tagilvvtGesGtGKTtllrrlleql 29 
                 ++++l++ G sG+GKTt+lr l+e+l
  KHJ32999.1 248 SQRLLLLKGVSGCGKTTTLRLLAESL 273
                 7899*******************998 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   2.4e-05     0.043       1      29 [.     251     279 ..     251     339 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2.4e-05
      AAA_33   1 lvllvGlpGsGKstlaerllkklgavlls 29 
                 l+ll G++G+GK+t ++ l++ lg+++l+
  KHJ32999.1 251 LLLLKGVSGCGKTTTLRLLAESLGCQVLE 279
                 67899*******************99985 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   5.9e-05      0.11       2      28 ..     252     278 ..     251     283 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 5.9e-05
                 EEEE--SSSSHHHHHHHGGGGBS--EE CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreve 28 
                 +lL+G +G+gK++  + la+ l+++v+
  KHJ32999.1 252 LLLKGVSGCGKTTTLRLLAESLGCQVL 278
                 79*******************987765 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   6.9e-05      0.12       2      98 ..     256     363 ..     255     382 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6.9e-05
                 E-TTSSHHHHHHHHHHHHTEEEEEHHHHHHHHHHTTT...SHSSHHHHC.......TSHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-SEEEETTEE.E CS
      AAA_17   2 GgPGsGKgtqceklvekygfthlsaGdllreeakrgg...lakardemr.......klpleekkelqkeaaekiaeeakkkgvlvdghprikeqagf.l 89 
                 G+ G+GK+t ++ l+e +g ++l+    +   a+++g   ++ ++de+        +l++++  e    +++k + +++k+ +lv+ +p++  +  + l
  KHJ32999.1 256 GVSGCGKTTTLRLLAESLGCQVLEWRNPVGPLASSDGclsMSAQFDEFLgrggiygQLDISPVLEAASSVKKKNKMHERKSIILVEEFPSNLSSTSItL 354
                 99*********************9888888888777743223444554465555555566666666666666655555777788888887765554435 PP

                 ESSHHHHHH CS
      AAA_17  90 dglpkevle 98 
                 + +++ +l+
  KHJ32999.1 355 QAFQSSILQ 363
                 666655555 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00012      0.21      18      46 ..     243     276 ..     227     284 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00012
                 H.....TEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE  18 l.....gdvilLeGdLGaGKTtlvrglakalgve 46 
                 +     ++++lL+G  G+GKTt  r la++lg++
  KHJ32999.1 243 FggktsQRLLLLKGVSGCGKTTTLRLLAESLGCQ 276
                 343334567**********************987 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   0.00015      0.27       1      27 [.     250     276 ..     250     283 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00015
                 SCEEEEC-TTTCHHHHHHHHHHHHCTS CS
       NACHT   1 rlvilqGeaGsGKTtLlqklalawaeg 27 
                 rl++l+G +G+GKTt l+ la+ +  +
  KHJ32999.1 250 RLLLLKGVSGCGKTTTLRLLAESLGCQ 276
                 6899**************999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (874 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       672  (0.0374812); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.43
# Mc/sec: 6136.56
//
Query:       KHJ33000.1  [L=250]
Description: putative alpha beta-hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.9e-12   46.9   0.0    7.4e-12   46.3   0.0    1.3  1  Abhydrolase_6  Alpha/beta hydrolase family
    3.4e-05   23.6   0.0      0.012   15.3   0.0    2.1  2  Abhydrolase_1  alpha/beta hydrolase fold
    0.00021   20.6   0.0    0.00032   20.1   0.0    1.3  1  Hydrolase_4    Serine aminopeptidase, S33
    0.00038   20.1   0.1    0.00062   19.4   0.1    1.3  1  Abhydrolase_8  Alpha/beta hydrolase
  ------ inclusion threshold ------
      0.023   14.4   0.2      0.096   12.4   0.1    1.9  2  PGAP1          PGAP1-like protein
      0.038   14.1   0.0      0.057   13.5   0.0    1.2  1  Thioesterase   Thioesterase domain


Domain annotation for each model (and alignments):
>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.0   2.5e-15   7.4e-12       1     217 [.       8     240 ..       8     243 .. 0.64

  Alignments for each domain:
  == domain 1  score: 46.3 bits;  conditional E-value: 2.5e-15
                    EEEE--GC.....GCHHHHHHHHCCTCEEEEE--TTSTS-GGCS.--HHH.CHHHHHHHCCTT..TTSEEEEEETCHHHHHHHHHHCC........ CS
  Abhydrolase_6   1 vlllHGagssassWlvapLaallaagvhvlapDlpGhGrsdppp.ldled.ladlaalldelaagggpvvlvGHSlGGalalaaapla........ 86 
                    ++ ++G++   +++  +++ +l ++g+ ++a+ lp+ G++++pp  +l++ +a+++++++  ++   +v+l++HS+GG++++ aa+++        
     KHJ33000.1   8 IIIVPGSWQQVTAF-RSFVSKLENEGFPTIAIKLPSVGSTSGPPlPGLDAdIAAVREVVTQTIEKSQEVILLCHSYGGLVGSNAAKGLdvhtrskq 102
                    68899944333333.33558889999************776666333322223334455555558899***************8888899999888 PP

                    .......EE.EEES-......----TTTS----TTHHHHHHTT-CCCCHCCH.S-HSCCCCHHHCCCCHCHCCCGHHHHCCHHCHTTCCHHTT-TT CS
  Abhydrolase_6  87 .....lvvg.vlldppp....talpagllaaalelllallallrllawlsre.plprlfladedadaawrarlarlaallaglgllpaaawadlpv 171
                         +  + ++l++ +     +l    ++ +  ++l+++++  +    ++e ++  +f +  ++daa ++   +++   ++l + + ++w+   +
     KHJ33000.1 103 gslggI-KKiIFLSAFVipsgKSL----FDLLGGQPLPWMDVQGDIVCAKKEkIAEIGFNDLSPEDAAKACLEMTHSSASTFLTPSNFEPWKNGIS 193
                    877642.33577777221112222....2333333333333222233333334444477776664566666666666666666677899******* PP

                    GCEEEC.TT-CHHHHCHHCCCH.STTEEETCE...SSS-HHHHSHHHH CS
  Abhydrolase_6 172 pllvlg.geDplvprllerlla.qagarlpvvlpgaGHlphleepdev 217
                      +v   +eD ++p++ ++++a q g +   v   +GH+ +l+ pd++
     KHJ33000.1 194 CDYV-StTEDNAIPHFQQEIMAkQLGPKANSVTLKSGHCAFLSIPDQL 240
                    **98.549999***********9444444466667*****99777765 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   3.9e-06     0.012       1      91 [.       6      91 ..       6      94 .. 0.81
   2 !    6.2   0.0    0.0023       6.8     216     254 ..     196     234 ..     180     236 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.9e-06
                   SEEEEE-STTTCGGGGTTGHHHHHHHHTTSEEEEEEETTSTTSSSTTTGB.CHHSHH.HHHHHHHHH.HHHCTTSSEEEEEETHHHHHHHHHH CS
  Abhydrolase_1  1 pvlvilhGlpgssdvwaerglapaLakdgfdvillDlrGvgySspapacinddygta.svaddldri.ldalgddkltlvGhSmGGmialaya 91
                   p+++i++G       ++   +++ L+ +gf +i++ l+ vg++s +p +     g++ ++a++ + + +   + ++++l+ hS+GG++++++a
     KHJ33000.1  6 PTIIIVPGSWQQVTAFRS--FVSKLENEGFPTIAIKLPSVGSTSGPPLP-----GLDaDIAAVREVVtQTIEKSQEVILLCHSYGGLVGSNAA 91
                   678999999999999999..***************************97.....444044444446645555667777***********9987 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0023
                    EEEETTCSSSCHHHHHHHHHCHTSEEEEEEETCSSSHHH CS
  Abhydrolase_1 216 visgtsDplvppkaledlaqllpkkrlvvisdagHlafl 254
                    ++s+t+D+++p+ ++e +a++l  k   v  ++gH+afl
     KHJ33000.1 196 YVSTTEDNAIPHFQQEIMAKQLGPKANSVTLKSGHCAFL 234
                    6899*****************8777************97 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   1.1e-07   0.00032       4      95 ..       5      95 ..       3     154 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 1.1e-07
  Hydrolase_4  4 kavvvlvHGlaehsgryaelaeaLaaqGfavyalDhrGhGrsegkrghvpsfddyvdDlaafvekvkeehpelplfllGhSmGGliallyl...l 95
                 k ++++v+G  + + ++  ++ +L ++Gf ++a+     G + g     p +d  ++ ++++v++    ++ ++++ll+hS GGl+  +++   +
   KHJ33000.1  5 KPTIIIVPGSWQQVTAFRSFVSKLENEGFPTIAIKLPSVGSTSGPPL--PGLDADIAAVREVVTQTI--EKSQEVILLCHSYGGLVGSNAAkglD 95
                 679***************************************88877..788877777777776666..455688***********999986541 PP

>> Abhydrolase_8  Alpha/beta hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.1   2.1e-07   0.00062      98     132 ..      61      94 ..      54     107 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 2.1e-07
  Abhydrolase_8  98 lrdlrats.vpgqhlallgHSYGSlvaslAlddaas 132
                    +r++ +++ + +q++ ll+HSYG lv s A++    
     KHJ33000.1  61 VREVVTQTiEKSQEVILLCHSYGGLVGSNAAKG--L 94 
                    567777777899*******************98..3 PP

>> PGAP1  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.34     1e+03       6      28 ..       7      29 ..       5      34 .. 0.85
   2 ?   12.4   0.1   3.2e-05     0.096      76     108 ..      58      90 ..      54     116 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.34
       PGAP1  6 pVlFvpGnagsykqvrslAseaa 28
                +++ vpG+   ++  rs+ s+ +
  KHJ33000.1  7 TIIIVPGSWQQVTAFRSFVSKLE 29
                6899****9999999**998875 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 3.2e-05
       PGAP1  76 IkyIlslysssekeptsviliGHSmGGivaraa 108
                 I+ + ++ +++ ++ ++vil+ HS+GG+v   a
  KHJ33000.1  58 IAAVREVVTQTIEKSQEVILLCHSYGGLVGSNA 90 
                 5566666677788999*************7554 PP

>> Thioesterase  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.9e-05     0.057       2      87 ..       7      94 ..       6     105 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.9e-05
                  EEEEE--TTCCSGGGHHHHHHCTTCEEEEEEECSTTST.SHHHCTTCHHHHHHHHHHHHHHH-SSS.SEEEEEETHHHHHHHHHHHHH CS
  Thioesterase  2 pLflfppagGsasvfrslasklsdpvvevlavqlpgre.rdepplesieelaaeyaealrqiqpeg.PyalfGhSlGgllAfevArqL 87
                  +++++p++   +++frs+ skl  +   ++a++lp+ + ++ ppl+++++ +a + e + q+ ++   + l  hS+Ggl+   +A+ L
    KHJ33000.1  7 TIIIVPGSWQQVTAFRSFVSKLENEGFPTIAIKLPSVGsTSGPPLPGLDADIAAVREVVTQTIEKSqEVILLCHSYGGLVGSNAAKGL 94
                  68899999999**************9************9999999988877777777776666665578**********987777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1824.16
//
Query:       KHJ33001.1  [L=217]
Description: putative snf2 family helicase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-58  198.9   3.6    1.2e-58  198.8   3.6    1.0  1  HECT_2    HECT-like Ubiquitin-conjugating enzyme (E2)-binding


Domain annotation for each model (and alignments):
>> HECT_2  HECT-like Ubiquitin-conjugating enzyme (E2)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  198.8   3.6   6.7e-63   1.2e-58       1     202 [.      11     214 ..      11     217 .] 0.95

  Alignments for each domain:
  == domain 1  score: 198.8 bits;  conditional E-value: 6.7e-63
      HECT_2   1 Ellpnirqislfvslpsplaesrksvkvslsedgilivlshe.esetlkLParvsesssrsnlelpedaskelsfrlpldeeessegskdeeslesses 98 
                 Ell+nirqis++++l++p+   ++s+k++ls+dg++++l h+ + +tl+LP++  ++    +l++p   skels+rlp +++++ ++++d+        
  KHJ33001.1  11 ELLSNIRQISVLAALETPS---NTSTKAKLSDDGQQFILLHNgTLQTLQLPGKSLSN---FQLQMPALGSKELSWRLPWEVQNKDFSRHDSYM------ 97 
                 9******************...889*****************9********999888...99*******************999987777654...... PP

      HECT_2  99 ekevpWsakdlsaetslrCrsCknvllksrkikrwkdLPSenwaemmdfWhCHkpdehed..............sedenaatkgygasnklspqegdgl 183
                   evpW ak++ ++t+l+Cr C++++l+++ ik wkdLPSe+waemmdfWhCHkpd+h++              + ++n+ ++ yga++k+s+q++ gl
  KHJ33001.1  98 -PEVPWPAKSMGTQTELSCRMCNETILERGIIKSWKDLPSEDWAEMMDFWHCHKPDDHKGcnssnedannlksfESNNNLVERAYGANSKISAQSKIGL 195
                 .59*****************************************************9999************999999999999*************** PP

      HECT_2 184 vdltsfllaesdcqglkls 202
                 vd+t+fll+ +dc+++++ 
  KHJ33001.1 196 VDITTFLLKNEDCSKIQCE 214
                 ***************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       413  (0.0230353); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1547.19
//
Query:       KHJ33002.1  [L=278]
Description: hypothetical protein EV44_g0276 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.2e-37  127.3   0.0    1.1e-36  126.7   0.0    1.3  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.7   0.0   6.3e-41   1.1e-36       6     127 ..     164     277 ..     159     278 .] 0.96

  Alignments for each domain:
  == domain 1  score: 126.7 bits;  conditional E-value: 6.3e-41
       RVT_2   6 vslPkdrkaigsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaaeeelvvhqldvdsafLnaeldeevyvkqPpGfe 104
                  + P++rk++gsrWvf +k     + ++karlv+qGf+q+ g+dy ++++P  r+ s+r+lla aa  e+ +hq+dv++a+L+++ldee+++  P G++
  KHJ33002.1 164 THVPRERKPVGSRWVFAIKA----DRRFKARLVTQGFRQVYGVDYFDTYSPTFRMASLRILLATAAYREWEIHQVDVKTAYLEGDLDEEIFMTCPEGMK 258
                 578****************5....89***********************************************************************99 PP

       RVT_2 105 idreeekvykLnkslyGlkqapl 127
                       k +k+nk+lyGlkq+++
  KHJ33002.1 259 AT----KFVKVNKALYGLKQSGR 277
                 87....9*************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1002  (0.0558871); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2149.85
//
Query:       KHJ33003.1  [L=102]
Description: hypothetical protein EV44_g3788 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       760  (0.0423894); expected 358.6 (0.02)
Passed bias filter:                      663  (0.0369792); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 806.49
//
Query:       KHJ33004.1  [L=574]
Description: hypothetical protein EV44_g4479 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1741  (0.0971052); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.87u 0.31s 00:00:01.18 Elapsed: 00:00:00.45
# Mc/sec: 3831.15
//
Query:       KHJ33005.1  [L=213]
Description: hypothetical protein EV44_g4969 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       519  (0.0289475); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1584.44
//
Query:       KHJ33006.1  [L=400]
Description: hypothetical protein EV44_g4991 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       740  (0.0412739); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2938.27
//
Query:       KHJ33007.1  [L=729]
Description: putative ap-1 adaptor complex subunit beta [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   4.1e-137  457.9   6.1   5.7e-137  457.4   6.1    1.0  1  Adaptin_N        Adaptin N terminal region
    5.2e-62  208.7   4.6    2.1e-60  203.5   1.3    2.8  3  Cnd1             non-SMC mitotic condensation complex subunit
    6.9e-16   58.4   0.1    2.3e-06   27.9   0.0    5.1  5  HEAT_2           HEAT repeats
    2.7e-11   42.7   3.2      0.023   14.9   0.0    6.4  7  HEAT             HEAT repeat
    0.00044   19.9   0.2        2.2    7.8   0.0    3.4  3  CLASP_N          CLASP N terminal
     0.0037   17.7   0.0       0.62   10.6   0.0    4.4  5  HEAT_EZ          HEAT-like repeat
     0.0084   16.3   1.3       0.52   10.5   0.1    3.9  3  RTP1_C1          Required for nuclear transport of RNA pol II
  ------ inclusion threshold ------
      0.054   13.5   0.1        7.5    6.6   0.0    3.6  4  Atx10homo_assoc  Spinocerebellar ataxia type 10 protein domai
      0.098   12.3   0.2       0.22   11.2   0.2    1.5  1  DUF1699          Protein of unknown function (DUF1699)
       0.16   11.9   1.6        3.1    7.7   1.5    2.9  1  Sec7_N           Guanine nucleotide exchange factor in Golgi 


Domain annotation for each model (and alignments):
>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  457.4   6.1  3.2e-140  5.7e-137       4     521 ..      16     531 ..      14     533 .. 0.94

  Alignments for each domain:
  == domain 1  score: 457.4 bits;  conditional E-value: 3.2e-140
                 HCCHHHHHHCCSSS-SCHHHHHHHHHHHHHHHCT---GHHHHHHHCCCCSS-CHHHHHHHHHHHHHCTTSCCHHCCCCHHHHHHCCSSSHHHHHHHHHH CS
   Adaptin_N   4 riqqelaeilnsnkdddekkkeavkkliylialGedvsflffevvklvaskdfelKrlvYlylellaeesedlalLvtnslqkDlkdpnqlirglALrv 102
                  ++ el++ l s+  +  ++kea++k i  ++lG+dvs lf++v+k++a+ d+ +K+lvYlyl+++a++++dl++L++n++ +D +dpn+lir+lA+r+
  KHJ33007.1  16 GETFELRAGLVSQ--YAYERKEAIQKTIMSMTLGKDVSALFPDVLKNIATTDLDQKKLVYLYLMNYAKSHPDLCILAVNTFVQDSEDPNPLIRALAIRT 112
                 5677888899999..9999******************************************************************************** PP

                 HCCC--CCCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCC.HHHHHHHCTT-SSHHHHHHHHHHHHHH..HCCCCCCCHHHHHHHCCHH CS
   Adaptin_N 103 LssirvpelaedlapaikkllkdrspyvrkkAalailklykkdpdllrkq.lveeikellsdkdpgvvlaAvalleei..kkndrlllkllpklvrrLc 198
                 +++irv+++++++++ ++k+l+d+spyvrk+Aa++++kl++++p  + ++ ++e ++e + d++p+vv++ v++l ei    ++  +l++ ++  +++ 
  KHJ33007.1 113 MGCIRVDKMVDYMEEPLRKTLRDESPYVRKTAAICVAKLFDLNPTMCLENgFLEILQEMIGDSNPMVVANSVTALVEIndSAPETKALQITSSTLKKML 211
                 ******************************************************************************644444444477777777777 PP

                 HHHHCS-HHHHHHHHHHHCC---SSHHHH..HHHHHHHCGGCGCSSCHHHHHHHHHCC......HCCCCST.....HHHCCHHCHHHHHHSSCCTCHHH CS
   Adaptin_N 199 nllteldpwlqvkiiklltrlarqepeerskkellesllnllqssnnaVlletvnliv......elapkne.....livlavnaLvrllsskdenlryv 286
                  +l+e+++w+ v+i+++l ++ +q+ +e+  + ++e++ +++q++n++V+l++v++++      +     +       ++++  L++l+ s +e ++yv
  KHJ33007.1 212 MALNECTEWGRVTILSTLAEYHAQDVKES--EHICERVSPQFQHVNASVVLAAVKVVFlhmknvS-----SelnkqYSKKMAPPLITLVASAPE-VQYV 302
                 777**************************..56***********************998555443.....444455889***************.**** PP

                 HHCHHHHHHHHXXTTTTTTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHHHHHHHHHHTTSSXXHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHH CS
   Adaptin_N 287 aLrtllkivkkepkavqhldlkifllktdddvsirlkaldlllklvdesNvkeivkeLkkyvkevadedfksklvkaIgrlaekfatdaewvldvllel 385
                 aLr++  +++   + + +++l++f++k++d+ +++l +l++++++++++N+++++ eLk+y+ ev d df++++v+aIg++a+k+++  e+++++ll+l
  KHJ33007.1 303 ALRNIDLLLQAM-PDILSKELRVFFCKYNDPPYVKLQKLEIMVRIANDKNIHQLLAELKEYALEV-DMDFVRRAVRAIGQVAIKIESACEKCVNTLLDL 399
                 ************.9999*********************************************999.********************************* PP

                 HTTXXHHHHHHHHHHHHHHHHHSTTTSTTCHHHHCCTCCGXXSHHHHHHHHHHHHHTTTTXTT...HHHHHHCTTTTTTTSXHHHHHHHHHHHHHHHHC CS
   Adaptin_N 386 lslsgesvkdeivevirdliqkvpelheeiiekLaellekieseearaaaiWllGeygelvsntesasdllrslaekfvlesekvklqiltalvKlylt 484
                 + ++ ++v++e+++vi+d+++k+p   e ii +L+++++++++++ar a+iW++Gey+e++sn   a ++l+ +   f++e ++++lqilta vKl+l 
  KHJ33007.1 400 IATKVNYVVQEAIVVIKDIFRKYPGY-EGIIPTLCKYIDDLDEPNARGALIWIVGEYAEKISN---ADQILSGFVDGFMEEFTQTQLQILTAVVKLFLK 494
                 *************************9.66**********************************...********************************* PP

                 XGCC.THXHHHHHHHHHHH..XXSHHHHHHHHHHHHHHC CS
   Adaptin_N 485 spdketqekliqlvlslat..ssdlevrdRaveylqlls 521
                  p+  +   l+q +l+ at  +++ ++rdRa+ y++lls
  KHJ33007.1 495 RPEGHQ--GLVQTILQAATveNDNPDIRDRAYVYWRLLS 531
                 **6544..799999999999989**************97 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       4.7   8.4e+03      92     129 ..      49      82 ..      40      85 .. 0.71
   2 !  203.5   1.3   1.2e-63   2.1e-60       1     160 [.     104     266 ..     104     268 .. 0.98
   3 !    5.4   0.0    0.0096        17       6     150 ..     374     515 ..     371     527 .. 0.71

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4.7
        Cnd1  92 aiynllpdiisklsdalnecsewgqitilefLlsyipk 129
                  +  l+pd+++++     + + ++ + ++ +L++y ++
  KHJ33007.1  49 DVSALFPDVLKNIA----TTDLDQKKLVYLYLMNYAKS 82 
                 56677788888877....56777777888888888765 PP

  == domain 2  score: 203.5 bits;  conditional E-value: 1.2e-63
        Cnd1   1 liRalairtlgcirvpnlveylvepLrkrLkDedpyVRktaaivvakL..ilndmvkekgflselaklleDenprVvanalaalteisek.senaiynl 96 
                 liRalairt+gcirv+++v+y+ epLrk+L+De+pyVRktaai+vakL  ++++m+ e+gfl+ l++++ D+np+Vvan+++al ei++   e++++++
  KHJ33007.1 104 LIRALAIRTMGCIRVDKMVDYMEEPLRKTLRDESPYVRKTAAICVAKLfdLNPTMCLENGFLEILQEMIGDSNPMVVANSVTALVEINDSaPETKALQI 202
                 7*****************************************************************************************76689**** PP

        Cnd1  97 lpdiisklsdalnecsewgqitilefLlsyipkdkqeaeslveklcprlqhansavvlaaikvi 160
                 ++++++k+++alnec+ewg++til++L++y ++d +e e+++e++ p++qh+n +vvlaa+kv+
  KHJ33007.1 203 TSSTLKKMLMALNECTEWGRVTILSTLAEYHAQDVKESEHICERVSPQFQHVNASVVLAAVKVV 266
                 **************************************************************98 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.0096
        Cnd1   6 airtlg..cirvpnlveylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDen.prVvanalaalteiseksenaiynllpdii 101
                 a+r++g  +i++++  e+ v+ L   +  +  yV + a++v+  ++ +++   +g++ +l k ++D + p+ +   + +  e++ek    i  +  +i+
  KHJ33007.1 374 AVRAIGqvAIKIESACEKCVNTLLDLIATKVNYVVQEAIVVIKDIF-RKYPGYEGIIPTLCKYIDDLDePNARGALIWIVGEYAEK----IS-NADQIL 466
                 899999999*************************999988777755.556677899999999999977244444444444444444....33.335566 PP

        Cnd1 102 sklsdalnecsewgqitilefLlsyipkdkqeaeslveklcprlqhans 150
                 s ++d   e   ++q +il+++++   k  +  + lv+ + +  + +n+
  KHJ33007.1 467 SGFVDGFMEEFTQTQLQILTAVVKLFLKRPEGHQGLVQTILQAATVEND 515
                 6666554455556788888888887766666677777777776666665 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0027       4.9      33      68 ..      91     126 ..      82     130 .. 0.77
   2 !   27.9   0.0   1.3e-09   2.3e-06       2      62 ..     127     194 ..     126     230 .. 0.76
   3 ?    3.9   0.1     0.039        70       2      87 ..     287     378 ..     286     379 .. 0.71
   4 !   15.3   0.0   1.1e-05      0.02      15      84 ..     369     449 ..     356     453 .. 0.82
   5 ?   -0.4   0.0      0.84   1.5e+03      28      51 ..     498     523 ..     473     526 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0027
      HEAT_2  33 lpaLvellededpavRraaaeaLgaigdpealpaLk 68 
                 ++++v+  ed++p +R+ a++++g i+ ++ ++  +
  KHJ33007.1  91 VNTFVQDSEDPNPLIRALAIRTMGCIRVDKMVDYME 126
                 556666678999999999999999888777776655 PP

  == domain 2  score: 27.9 bits;  conditional E-value: 1.3e-09
      HEAT_2   2 daLlqalendpdpevrraairaLg...rignp.....ealpaLvellededpavRraaaeaLgaigdpe 62 
                 ++L + l +d++p+vr++a+++ +   +++++       l++L e++ d++p+v ++ ++aL++i d++
  KHJ33007.1 127 EPLRKTL-RDESPYVRKTAAICVAklfDLNPTmclenGFLEILQEMIGDSNPMVVANSVTALVEINDSA 194
                 6899999.9***************655333334444355**************************8643 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.039
      HEAT_2   2 daLlqalendpdpevrraairaLg..rignpealpaLvell..eded.pavRraaaeaLgaigd....pealpaLkellddddddvvReaAaeaL 87 
                 ++L+ ++   + pev++ a+r++    ++ p++l   +++   +  d p+v  +  e +++i++    ++ l+ Lke++++ d d+vR+a ++a+
  KHJ33007.1 287 PPLITLV--ASAPEVQYVALRNIDllLQAMPDILSKELRVFfcKYNDpPYVKLQKLEIMVRIANdkniHQLLAELKEYALEVDMDFVRRA-VRAI 378
                 5667766..367889999999999765677888666555443455555799999999999998633445578999999999888999985.7776 PP

  == domain 4  score: 15.3 bits;  conditional E-value: 1.1e-05
      HEAT_2  15 evrraairaLg......rignpealpaLvellededpavRraaaeaLgai.....gdpealpaLkellddddddvvReaAa 84 
                 +  r+a+ra+g      + + ++++++L++l+ ++  +v ++a+  +  i     g +  +p L+++ dd d++  R a +
  KHJ33007.1 369 DFVRRAVRAIGqvaikiESACEKCVNTLLDLIATKVNYVVQEAIVVIKDIfrkypGYEGIIPTLCKYIDDLDEPNARGALI 449
                 556899*****7766555556699***********************9887777788***********9989888888766 PP

  == domain 5  score: -0.4 bits;  conditional E-value: 0.84
      HEAT_2  28 gnpealpaLvell..ededpavRraa 51 
                 g++ +++++++++  e+++p++R  a
  KHJ33007.1 498 GHQGLVQTILQAAtvENDNPDIRDRA 523
                 45667888888776677888888665 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.0    0.0094        17       5      26 ..      94     115 ..      90     116 .. 0.81
   2 !   14.9   0.0   1.3e-05     0.023       5      27 ..     129     151 ..     127     154 .. 0.89
   3 !   11.3   0.0   0.00018      0.33       1      27 [.     164     190 ..     164     193 .. 0.93
   4 ?   -3.8   0.0        10   1.8e+04      10      22 ..     252     264 ..     250     265 .. 0.79
   5 ?    1.0   0.0      0.38   6.9e+02       3      28 ..     287     311 ..     286     314 .. 0.79
   6 ?   -3.4   0.0       9.7   1.7e+04      20      28 ..     374     382 ..     371     382 .. 0.78
   7 ?    3.5   0.0     0.061   1.1e+02       1      30 [.     428     458 ..     428     459 .. 0.92

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0094
                 HHHHHT-SSHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLga 26 
                 +++  +Dp+p +R+ A++++g 
  KHJ33007.1  94 FVQDSEDPNPLIRALAIRTMGC 115
                 555579************9985 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1.3e-05
                 HHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgal 27 
                 l k l+D+sp VR++Aa ++++l
  KHJ33007.1 129 LRKTLRDESPYVRKTAAICVAKL 151
                 7789***************9988 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 0.00018
                 HHHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgal 27 
                 +l +l++++ D++p V ++++ aL+++
  KHJ33007.1 164 FLEILQEMIGDSNPMVVANSVTALVEI 190
                 5899********************998 PP

  == domain 4  score: -3.8 bits;  conditional E-value: 10
                 T-SSHHHHHHHHH CS
        HEAT  10 sDpspeVReaAak 22 
                 ++ +++V  aA+k
  KHJ33007.1 252 QHVNASVVLAAVK 264
                 5678999999987 PP

  == domain 5  score: 1.0 bits;  conditional E-value: 0.38
                 HHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgala 28 
                 P+l++ l  ++peV + A++++  l+
  KHJ33007.1 287 PPLIT-LVASAPEVQYVALRNIDLLL 311
                 66677.46899*********997665 PP

  == domain 6  score: -3.4 bits;  conditional E-value: 9.7
                 HHHHHHHHH CS
        HEAT  20 AakaLgala 28 
                 A++a+g++a
  KHJ33007.1 374 AVRAIGQVA 382
                 899999875 PP

  == domain 7  score: 3.5 bits;  conditional E-value: 0.061
                 HHHHHHHHHT-.SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsD.pspeVReaAakaLgalaev 30 
                 ++P+l+k + D ++p+ R a ++ +g+ ae+
  KHJ33007.1 428 IIPTLCKYIDDlDEPNARGALIWIVGEYAEK 458
                 89*********************99999885 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0012       2.2     172     209 ..     120     157 ..     111     161 .. 0.89
   2 ?    1.2   0.0      0.13   2.3e+02     179     215 ..     166     203 ..     160     215 .. 0.66
   3 !    6.3   0.0    0.0034       6.1      87     126 ..     384     423 ..     368     435 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0012
     CLASP_N 172 llldliekslkkgleDanptVRetaRstfweffkvwPs 209
                 +++d +e+ l+k l D +p VR+ta  ++ ++f+  P+
  KHJ33007.1 120 KMVDYMEEPLRKTLRDESPYVRKTAAICVAKLFDLNPT 157
                 56789999********************9999998885 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.13
     CLASP_N 179 kslkkgleDanptVRetaRstfweffkvwPs.rAksll 215
                 ++l++++ D+np V  ++ ++++e+ + +P+ +A ++ 
  KHJ33007.1 166 EILQEMIGDSNPMVVANSVTALVEINDSAPEtKALQIT 203
                 67788888888888888888888877777762344444 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.0034
     CLASP_N  87 qldpmveillptLlkllgdtKkiisqnanqalaallsnas 126
                 ++++ +e+ ++tLl+l++ + + + q+a +++++++++ +
  KHJ33007.1 384 KIESACEKCVNTLLDLIATKVNYVVQEAIVVIKDIFRKYP 423
                 69999******************************99876 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0       0.3   5.4e+02      38      54 ..      99     115 ..      90     116 .. 0.86
   2 !   10.6   0.0   0.00035      0.62       4      54 ..     106     150 ..     103     151 .. 0.79
   3 ?   -0.2   0.0      0.84   1.5e+03      32      52 ..     167     187 ..     159     190 .. 0.84
   4 ?   -3.0   0.0       6.6   1.2e+04       6      13 ..     373     380 ..     372     386 .. 0.65
   5 ?   -2.7   0.0       5.3   9.6e+03      29      53 ..     428     453 ..     426     455 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.3
     HEAT_EZ  38 nddsdeVRaaAagaLgn 54 
                 +d+++++Ra A+++ g 
  KHJ33007.1  99 EDPNPLIRALAIRTMGC 115
                 79999*******99875 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00035
     HEAT_EZ   4 RraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLgn 54 
                 R+ A++++G++       + ++v+ +  +L ++L+d+s+ VR++Aa++ ++
  KHJ33007.1 106 RALAIRTMGCIR------VDKMVDYMEEPLRKTLRDESPYVRKTAAICVAK 150
                 666666666555......66788888899*****************99776 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.84
     HEAT_EZ  32 aLlalLnddsdeVRaaAagaL 52 
                  L  +  d++++V a+++ aL
  KHJ33007.1 167 ILQEMIGDSNPMVVANSVTAL 187
                 5778999**********9998 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 6.6
     HEAT_EZ   6 aAawaLGr 13 
                  A++a+G 
  KHJ33007.1 373 RAVRAIGQ 380
                 56666663 PP

  == domain 5  score: -2.7 bits;  conditional E-value: 5.3
     HEAT_EZ  29 ilpaLlalLnd.dsdeVRaaAagaLg 53 
                 i+p L++   d d+++ R+a ++  g
  KHJ33007.1 428 IIPTLCKYIDDlDEPNARGALIWIVG 453
                 78888888888899999999888766 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.5   0.1   0.00029      0.52       6      75 ..     131     198 ..      92     296 .. 0.93
   2 ?   -1.5   0.0       1.5   2.8e+03      62     105 ..     338     381 ..     330     388 .. 0.76
   3 ?    1.2   0.1      0.23   4.2e+02      37      85 ..     388     438 ..     350     464 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00029
     RTP1_C1   6 kdlqdpllpvrahglvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeev 75 
                 k l+d+ + vr  + +  +kl+  +   ++   +  l++l+e++ d+++ v  n++ +Lv++ d  pe+ 
  KHJ33007.1 131 KTLRDESPYVRKTAAICVAKLFDLNP--TMCLENGFLEILQEMIGDSNPMVVANSVTALVEINDSAPETK 198
                 67899999999999999999999998..999*********************************999864 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.5
     RTP1_C1  62 kgLvaLadvfpeevlklLleeyeeenekeslderlkvGEaLlrv 105
                 + L+ ++ + +++ +++Ll+e +e + + ++d   ++  a+ +v
  KHJ33007.1 338 QKLEIMVRIANDKNIHQLLAELKEYALEVDMDFVRRAVRAIGQV 381
                 67888999999999999999998777777777666665555555 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.23
     RTP1_C1  37 diekilkllleaLkdedsYvYLnaikgLvaLadvfp..eevlklLleeyee 85 
                   ek +++ll+ ++ +  Yv  +ai ++  +  ++p  e ++++L+++  +
  KHJ33007.1 388 ACEKCVNTLLDLIATKVNYVVQEAIVVIKDIFRKYPgyEGIIPTLCKYIDD 438
                 56788899999999999**************99998446799999987744 PP

>> Atx10homo_assoc  Spinocerebellar ataxia type 10 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.12   2.1e+02      40      60 ..     135     155 ..     123     159 .. 0.85
   2 ?   -1.4   0.0       1.4   2.5e+03      25      56 ..     160     190 ..     145     201 .. 0.70
   3 ?   -2.8   0.0       3.8   6.8e+03      42      54 ..     404     416 ..     372     423 .. 0.54
   4 ?    6.6   0.0    0.0042       7.5      27      67 ..     501     541 ..     496     555 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.12
  Atx10homo_assoc  40 dnnPfirewailairnLlegn 60 
                      d+ P++r+ a +++ +L + n
       KHJ33007.1 135 DESPYVRKTAAICVAKLFDLN 155
                      789***********9998766 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.4
  Atx10homo_assoc  25 eldgleliLsqcniDdnnPfirewailairnL 56 
                       ++g+  iL+++ i d+nP++   ++ a+  +
       KHJ33007.1 160 LENGFLEILQEM-IGDSNPMVVANSVTALVEI 190
                      556777788776.5567999999999887655 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 3.8
  Atx10homo_assoc  42 nPfirewailair 54 
                        ++ + ai+ i+
       KHJ33007.1 404 VNYVVQEAIVVIK 416
                      3355555666665 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.0042
  Atx10homo_assoc  27 dgleliLsqcniDdnnPfirewailairnLlegneenqelv 67 
                      + +++iL++  ++++nP ir++a +  r L  + + +++++
       KHJ33007.1 501 GLVQTILQAATVENDNPDIRDRAYVYWRLLSGDLQVAKAII 541
                      5589********************99999988877777776 PP

>> DUF1699  Protein of unknown function (DUF1699)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   0.00012      0.22      29     100 ..     183     254 ..     178     277 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00012
     DUF1699  29 sntdilslvkkcpklkaiqvpeSykktlsksakmfleiqgiellegdvwghrkdineyyevseevierikel 100
                 s t ++++  ++p+ ka+q+++S  k++  + +   e  ++++l      h +d++e  ++ e+v  + +++
  KHJ33007.1 183 SVTALVEINDSAPETKALQITSSTLKKMLMALNECTEWGRVTILSTLAEYHAQDVKESEHICERVSPQFQHV 254
                 67889999*************************************************999999888777665 PP

>> Sec7_N  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   1.5    0.0018       3.1      30     115 ..     253     333 ..     224     375 .. 0.69

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0018
      Sec7_N  30 ersktfsLeLlesvlsnhgdvfrkhpellqllkqklcplLlknlsespsfpvferslrivllLlkkfrseLktEievflsllilil 115
                 + +  + L  ++ v+ + ++v   ++el +   +k+ p L++++   ++++v  ++lr + lLl+ + + L +E+ vf+   + + 
  KHJ33007.1 253 HVNASVVLAAVKVVFLHMKNV---SSELNKQYSKKMAPPLITLV--ASAPEVQYVALRNIDLLLQAMPDILSKELRVFFCKYNDPP 333
                 445555555555555444443...46777777788888888888..5678888888999999999999999999999997766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (729 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       700  (0.0390429); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.43
# Mc/sec: 5131.07
//
Query:       KHJ33008.1  [L=327]
Description: putative eukaryotic translation initiation factor 2 beta subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.8e-42  142.3   0.3    1.2e-41  141.3   0.3    1.5  1  eIF-5_eIF-2B  Domain found in IF2B/IF5
  ------ inclusion threshold ------
      0.038   14.4   0.0       0.17   12.3   0.0    2.0  2  FERM_M        FERM central domain
      0.078   12.8   2.5        3.6    7.4   0.1    2.7  3  zf-HYPF       HypF finger
       0.14   11.7   0.6        0.3   10.7   0.6    1.6  1  TF_Zn_Ribbon  TFIIB zinc-binding


Domain annotation for each model (and alignments):
>> eIF-5_eIF-2B  Domain found in IF2B/IF5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.3   0.3   2.6e-45   1.2e-41       8     116 ..     195     304 ..     188     305 .. 0.96

  Alignments for each domain:
  == domain 1  score: 141.3 bits;  conditional E-value: 2.6e-45
                   SS--SSTT--EEEETT.EEEETTHHHHHHHHTTSHHHHHHHHHHHHTSEEEESETTEEEESSSSSCCHHHHHHHHHHHHHTSTSSSTSTCEEECC.S CS
  eIF-5_eIF-2B   8 kerykmpklqvkvegkkktvivNfeeiakaLnrdpehvlkyllkelgtqgsidengrlilngkfeakkleklldkyieeyVlCkeCkspetelek.e 103
                   ++ yk+p++q+ +eg+kkt+++N++ei+k+++r++ehv++yl++elgt+gs+d+++rl+++g+f++k++e++l++yi eyV+Ck+C+sp+tel+k e
    KHJ33008.1 195 SKSYKIPPPQCLREGNKKTIFANIAEICKRMKRTDEHVTSYLFAELGTSGSVDGSRRLVIKGRFQQKQIENVLRRYIMEYVTCKTCRSPDTELNKgE 291
                   568********************************************************************************************99 PP

                   SSCEEEEESSSTC CS
  eIF-5_eIF-2B 104 erllvlkCkaCga 116
                   +rl++++C++Cg+
    KHJ33008.1 292 NRLHFITCNSCGS 304
                   ************8 PP

>> FERM_M  FERM central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1       0.6   2.7e+03      56      86 ..      63      94 ..      47     111 .. 0.65
   2 ?   12.3   0.0   3.8e-05      0.17      29      95 ..     119     229 ..     109     238 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.6
                XXXSSSXGGGSSXCHHHHHSXHHH.HHHHHHH CS
                xxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx RF
      FERM_M 56 kakeslnleeylpprlikklkskq.lekrile 86
                + ++s++  + + ++++kk k+++ +e++i +
  KHJ33008.1 63 QDSNSIDDVSNMLKSMKKKKKTQKpVEEEISA 94
                44555664555556666666655558877755 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 3.8e-05
                 XXHHHHHHHHHHHHHHHHHHHHC............................................XXXXXXXSSSXGGGSSXCHHHHHSXHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxx............................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      FERM_M  29 cteeeallLAaLqlqiekgdlse............................................sssekakeslnleeylpprlikklkskqlekr 83 
                 +++e a++ AaLq+  + g+  +                                            +++++ ++  +  ++ pp+++++ ++k + ++
  KHJ33008.1 119 VEDEFAAKIAALQIDSKEGNNGAtgssaaleiyegdvekgtglwqhnsevkipydkllsrffillaqKNPDHLSSGSKSYKIPPPQCLREGNKKTIFAN 217
                 5678899************97779*****************************************9999999999999********************* PP

                 HHHHHHHHHHHH CS
                 xxxxxxxxxxxx RF
      FERM_M  84 ileahqnvaqls 95 
                 i+e +++++  +
  KHJ33008.1 218 IAEICKRMKRTD 229
                 ******996544 PP

>> zf-HYPF  HypF finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       1.1   4.9e+03       3       8 ..     203     208 ..     203     212 .. 0.82
   2 ?    4.6   0.1    0.0062        28      15      27 ..     268     280 ..     260     282 .. 0.83
   3 ?    7.4   0.1   0.00081       3.6      20      32 ..     295     307 ..     285     309 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.1
                 HHHHHH CS
     zf-HYPF   3 edClrE 8  
                 ++ClrE
  KHJ33008.1 203 PQCLRE 208
                 68***9 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0062
                 TTTT-TT---TTT CS
     zf-HYPF  15 RRfhaqfisCtnC 27 
                 RR+  + ++C+ C
  KHJ33008.1 268 RRYIMEYVTCKTC 280
                 ************9 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.00081
                 TT---TTTS--EE CS
     zf-HYPF  20 qfisCtnCGPrls 32 
                  fi+C++CG r s
  KHJ33008.1 295 HFITCNSCGSRRS 307
                 59*******9865 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.6   6.6e-05       0.3       2      27 ..     276     304 ..     275     318 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 6.6e-05
                   EETTTTCEECHEE..TSTTCE.EESSSSB CS
  TF_Zn_Ribbon   2 kCPnCgstnlveD..pergel.vCtdCGl 27 
                   +C+ C s++++++  ++r  + +C +CG+
    KHJ33008.1 276 TCKTCRSPDTELNkgENRLHFiTCNSCGS 304
                   7************999999999******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1777  (0.0991132); expected 358.6 (0.02)
Passed bias filter:                      739  (0.0412181); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.21s 00:00:00.76 Elapsed: 00:00:00.38
# Mc/sec: 2557.58
//
Query:       KHJ33009.1  [L=213]
Description: putative hpt domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.7e-13   48.7   0.0    1.2e-12   47.9   0.0    1.4  1  Hpt       Hpt domain


Domain annotation for each model (and alignments):
>> Hpt  Hpt domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0   6.5e-17   1.2e-12       6      75 ..      59     133 ..      54     146 .. 0.83

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 6.5e-17
                 HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHH.HCTSCHHHHHHHH....HH CS
         Hpt   6 fleeaeelleqleqaldqedlqelaraaHtLKGsagmlGltelaelahelEdlld.ragelelepelle....al 75 
                 f+e+ae+ ++q+e+al+++dl +l ++ H LKGs+++lGlt+++  ++++++  + +++e  ++++  +    ++
  KHJ33009.1  59 FFEQAETTFTQIEAALESKDLPKLSSLGHFLKGSSATLGLTKVKNSCEKIQHFGQkKDQEGIADEDDEDkclkRI 133
                 9***************************************************66677777777666666544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1024  (0.0571142); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1683.94
//
Query:       KHJ33010.1  [L=174]
Description: putative u1 small nuclear ribonucleo protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-06   28.1   0.8    1.7e-06   27.7   0.8    1.2  1  zf-U1     U1 zinc finger


Domain annotation for each model (and alignments):
>> zf-U1  U1 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.8   9.5e-11   1.7e-06      18      38 .]       1      21 [.       1      21 [. 0.97

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 9.5e-11
                HHHHHHHHTSHHHHHHHHHHH CS
       zf-U1 18 psvRksHngGrkHkenvkdyy 38
                +svRk+Hn+Gr+H +nv dyy
  KHJ33010.1  1 MSVRKAHNSGRNHLRNVVDYY 21
                69******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       282  (0.0157287); expected 358.6 (0.02)
Passed bias filter:                      210  (0.0117129); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1283.29
//
Query:       KHJ33011.1  [L=763]
Description: putative serine threonine protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      5e-74  249.0   0.0    6.9e-74  248.5   0.0    1.2  1  Pkinase          Protein kinase domain
    1.1e-39  136.3   0.0    1.6e-39  135.7   0.0    1.2  1  Pkinase_Tyr      Protein tyrosine kinase
    1.4e-21   77.2   0.6    2.5e-10   40.8   0.2    2.8  2  AdenylateSensor  Adenylate sensor of SNF1-like protein kinase
    6.4e-12   45.4   0.0    1.4e-11   44.3   0.0    1.6  1  UBA_2            Ubiquitin associated domain (UBA)
      1e-06   28.3   0.0      4e-06   26.3   0.0    1.9  2  Kinase-like      Kinase-like
     0.0018   17.3   0.8     0.0043   16.0   0.8    1.6  1  Haspin_kinase    Haspin like kinase domain
     0.0028   17.3   0.1     0.0054   16.4   0.1    1.4  1  RIO1             RIO1 family
  ------ inclusion threshold ------
      0.048   13.0   0.2        0.1   12.0   0.2    1.6  1  Kdo              Lipopolysaccharide kinase (Kdo/WaaP) family
      0.072   11.9   0.1       0.14   11.0   0.1    1.4  1  YukC             WXG100 protein secretion system (Wss), prote


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.5   0.0   3.4e-77   6.9e-74       1     264 []      61     312 ..      61     312 .. 0.94

  Alignments for each domain:
  == domain 1  score: 248.5 bits;  conditional E-value: 3.4e-77
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslsee 98 
                 y+ +++lGeGsfGkV  a+++et+++vA+K+i+++k  +++   +v rEi++l+ l+hp+i++ly v++++ e+++vley+  gel+d++ ++g+++e+
  KHJ33011.1  61 YQIVRTLGEGSFGKVKLATHRETHQQVALKIIARKKLISRDMaGRVEREIEYLQLLRHPHIIKLYTVIKSQLEIIMVLEYAG-GELFDYIVQHGKMKED 158
                 78899***************************999988877779************************************98.67************** PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCB.SHHHHHHHHHHHHHHHHHSS-S CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeney.skkvDvWslGvilyelltgkpp 196
                 ea+++++qi+ ++ey+H+++i+HrDlKpeN+L+de  ++Ki+DFGl++ ++ ++ l++ +g+++Y APEv++++ y +++vDvWs+Gvily ll g+ p
  KHJ33011.1 159 EARRFFQQIICAVEYCHRHKIVHRDLKPENLLLDEFLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYaGPEVDVWSCGVILYVLLVGRLP 257
                 ***********************************************************************999999********************** PP

                 TTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 197 fsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 f +e+  + ++k++             k ++  ++ +s+ a  l+kk+l+++p +R t+ee+  ++++
  KHJ33011.1 258 FDDEHIPSLFAKIA-------------KGNYVVPNYMSSGAAALIKKMLAVNPVHRATIEEIRMDSWF 312
                 **444444333333.............3488999*****************************99998 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.7   0.0   8.1e-43   1.6e-39       3     256 ..      63     307 ..      61     309 .. 0.90

  Alignments for each domain:
  == domain 1  score: 135.7 bits;  conditional E-value: 8.1e-43
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE..STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtl..keeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  + ++lGeG+fGkV  +t +    +++++Va+K++  k+  +++   ++ +e++ ++ l+hp+i+kl+ v+ ++ ++++v+ey+ gG+L +++ ++   
   KHJ33011.1  63 IVRTLGEGSFGKVKLATHR----ETHQQVALKIIarKKLISRDMAGRVEREIEYLQLLRHPHIIKLYTVIKSQLEIIMVLEYA-GGELFDYIVQH--G 153
                  6799*************99....9999******95334455666888999*******************************96.89********9..9 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEE.HHHHHHHHHHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkft.sksDvWsfGvll 195
                  k++ ++  +f +q+ +++ey +++k+vHrdl   N Ll+e   vki+DfGL++ + +d +   k+++  + ++ apE+++ k +   + DvWs Gv+l
   KHJ33011.1 154 KMKEDEARRFFQQIICAVEYCHRHKIVHRDLKPENLLLDEFLNVKIADFGLSNIM-TDGNFL-KTSC-GSPNYAAPEVINGKLYAgPEVDVWSCGVIL 248
                  9***************************************************987.444444.4444.4569***********87369********** PP

                  HHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 196 wEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselv 256
                  + ++  g+ p+ + +  ++++k+ +g+ +  p+++++  + l+kk ++ +p +R+t++e++
   KHJ33011.1 249 YVLLV-GRLPFDDEHIPSLFAKIAKGNYV-VPNYMSSGAAALIKKMLAVNPVHRATIEEIR 307
                  *8887.********999999999988765.68999**********************9996 PP

>> AdenylateSensor  Adenylate sensor of SNF1-like protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.0   1.9e-11   3.7e-08       1      41 [.     562     599 ..     562     622 .. 0.81
   2 !   40.8   0.2   1.2e-13   2.5e-10      45     117 .]     692     759 ..     657     759 .. 0.83

  Alignments for each domain:
  == domain 1  score: 33.8 bits;  conditional E-value: 1.9e-11
                      SEEESEEEES-HHHHHHHHHHHHHHTTEEE-----GGGGEE CS
  AdenylateSensor   1 rWhfGirsrsypldvlgeiyralknlGaewakPseeelwti 41 
                      +W fGirsr  pl+  g iyral++lGaew+    +e wt+
       KHJ33011.1 562 KWQFGIRSRNLPLEATGCIYRALQKLGAEWVI---DEGWTL 599
                      8*****************************85...444555 PP

  == domain 2  score: 40.8 bits;  conditional E-value: 1.2e-13
                      EE-HHHHHTT--EEEEEEEEEEEEETTEEEEEEEEEEEEESSSSSTTTTTSSTTS---STTHHHHHHHHHHHH CS
  AdenylateSensor  45 wkykkaekenkedlmkleiqlfqlepnnylvdfkfdGwessssekeetaeededevssayPflhlatrlilel 117
                      + ++++ +++  ++m l iql+++ +  ylvdfk  G+e+  +        +e++v+s +Pfl+la++li++l
       KHJ33011.1 692 YDLETSIEQEYFVVMLLDIQLYEMDSGVYLVDFKCAGYETDDGM-----ILEEKDVTSPFPFLDLASKLIIQL 759
                      4445555555568999**********************987554.....44577899*************987 PP

>> UBA_2  Ubiquitin associated domain (UBA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   0.0   6.9e-15   1.4e-11       1      46 []     355     396 ..     355     396 .. 0.98

  Alignments for each domain:
  == domain 1  score: 44.3 bits;  conditional E-value: 6.9e-15
       UBA_2   1 IdedvvsaLsktMGYdkdeIieaLekaekskssneIkDAYlLmkEN 46 
                 ++++v +++skt GY   +++eaL ++++s    +IkDAYl+++EN
  KHJ33011.1 355 LHDQVTEKISKTVGYGIKDVQEALAADQPS----AIKDAYLIVREN 396
                 69****************************....***********9 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.52     1e+03      17      54 ..      64     101 ..      56     120 .. 0.78
   2 !   26.3   0.0     2e-09     4e-06     138     284 ..     153     296 ..     120     300 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.52
  Kinase-like  17 gellkkgdrsvvfevkdqetgeplavkvfllpseaskk 54 
                  +  l++g +++v +++  et +++a+k+   ++  s+ 
   KHJ33011.1  64 VRTLGEGSFGKVKLATHRETHQQVALKIIARKKLISRD 101
                  5678999999***************9998776666655 PP

  == domain 2  score: 26.3 bits;  conditional E-value: 2e-09
  Kinase-like 138 hkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggf..taLvragtkvvlsevekgfaPpEllgsrggytrknktkmthklda 233
                   k  e+ ar     q+i  + + + + +vh +++++nlllde   +++ +f  ++++++g+  + s     +a pE+++         k+    ++d+
   KHJ33011.1 153 GKMKEDEARRFF-QQIICAVEYCHRHKIVHRDLKPENLLLDEFLNVKIADFglSNIMTDGNFLKTSCGSPNYAAPEVING--------KLYAGPEVDV 241
                  344567788888.799*********************************9844689******9999999*********99........4557789*** PP

  Kinase-like 234 WqlGlviyriwclklPltlat.eeakeew...kfklckkipekvkaLlkkfLqls 284
                  W  G+  y +    lP++    +    +    ++   + ++   +aL+kk+L ++
   KHJ33011.1 242 WSCGVILYVLLVGRLPFDDEHiPSLFAKIakgNYVVPNYMSSGAAALIKKMLAVN 296
                  *****************86431322222233455555578888888888888766 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.8   2.2e-06    0.0043     178     257 ..     126     208 ..      49     217 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.2e-06
  Haspin_kinase 178 fyseqqlflvlllkdkGtdLeev..klksw..kqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsRle 257
                    ++ + ql ++++l+++G +L     +  ++  ++a + f qi+  +     + +  HRdL+ +n L+d+ lnv + d+ ls + 
     KHJ33011.1 126 TVIKSQLEIIMVLEYAGGELFDYivQHGKMkeDEARRFFQQIICAVEY-CHRHKIVHRDLKPENLLLDEFLNVKIADFGLSNIM 208
                    455679999********9998875533344114677777776655544.47899************************999875 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.1   2.7e-06    0.0054      54     150 ..     105     203 ..      66     211 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 2.7e-06
                 HHHHHHHHHHHHHHTT.--S--EEEEETTEE.EEE--EETTEEGGB.HHHCG-.HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE- CS
        RIO1  54 waekEfrnLkrleeag.vpvPkpielkrhvl.vmefigedgvaapk.lkdvee.eeeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviI 147
                  +e+E+++L+ l++ + ++  ++i+ + +++ v+e+ g  g      +++ ++ e+ea++ +++++ +++    ++++vH DL   N+l+de  +v i 
  KHJ33011.1 105 RVEREIEYLQLLRHPHiIKLYTVIKSQLEIImVLEYAG--GELFDYiVQHGKMkEDEARRFFQQIICAVEYCH-RHKIVHRDLKPENLLLDEFlNVKIA 200
                 57999999999998776899999999987643899999..4444440444443499***********877666.****************998888888 PP

                 -GT CS
        RIO1 148 Dvs 150
                 D++
  KHJ33011.1 201 DFG 203
                 875 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.2     5e-05       0.1     105     153 ..     145     193 ..      68     206 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 5e-05
         Kdo 105 LedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqq 153
                 L d++ ++ +++e   r+ ++++  +++  hr ++ H+dl + n+ll++
  KHJ33011.1 145 LFDYIVQHGKMKEDEARRFFQQIICAVEYCHRHKIVHRDLKPENLLLDE 193
                 5677777888999999*******************************97 PP

>> YukC  WXG100 protein secretion system (Wss), protein YukC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1     7e-05      0.14      54     108 ..     155     210 ..     107     216 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 7e-05
                 GS-HHHHHHHHHHGGGGGG.GGGSSEE---SGGGEEE-TTS-EEES--EETTTBS- CS
        YukC  54 kkekkeklrlalnikalee.llssrltlilhPeNlvfdknlepkilhrgvkeslpp 108
                  ke++++ ++ + i a+e  + ++ ++  l+PeNl++d+ l++ki+  g+ +++ +
  KHJ33011.1 155 MKEDEARRFFQQIICAVEYcHRHKIVHRDLKPENLLLDEFLNVKIADFGLSNIMTD 210
                 445555555555578887615566789************************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (763 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 5136.07
//
Query:       KHJ33012.1  [L=218]
Description: putative endoplasmic reticulum vesicle protein 25 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.9e-42  144.2   0.0    4.5e-42  144.1   0.0    1.0  1  EMP24_GP25L  emp24/gp25L/p24 family/GOLD
  ------ inclusion threshold ------
      0.082   11.1   0.1       0.11   10.7   0.1    1.1  1  EzrA         Septation ring formation regulator, EzrA


Domain annotation for each model (and alignments):
>> EMP24_GP25L  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.1   0.0     5e-46   4.5e-42       3     182 .]      25     213 ..      23     213 .. 0.93

  Alignments for each domain:
  == domain 1  score: 144.1 bits;  conditional E-value: 5e-46
  EMP24_GP25L   3 tfklpag.....eekCfyeelkkgtlltgsyqvtdgg.aaldvdlsvkdpdgngerlvkkkdresegdfsftakesgeykvCfdnsfstkss.....k 89 
                  +f+l+a+     +++C+   ++k+tl++++  v   + ++  v+++v+d +g  +++ k kd+  e++++ft++ +  + vCf+n+ +  +s     +
   KHJ33012.1  25 KFDLEAHpkgseKQRCIRNFVPKDTLVVVTAVVSGTKgDGMIVNIHVHDAFG--NEYGKPKDVVGEKKMAFTSHIDASFDVCFTNQLTGAASvskpfR 120
                  566655544444889*****************994444699*******8888..**********99********************999888****** PP

  EMP24_GP25L  90 kvsfdievgseasdykdsakkekletleselkkleekldsikreqkylrereerlrdtnestnsrvvwwsilqllvlvlvavlqvyyLkrfFk 182
                   v++ i++g++a+d+++++ +ekl+++e+el+++ee + +i  e++ylr re++lrdtnestn+rv w+++ ++++l+ ++++q++yL+ +F+
   KHJ33012.1 121 HVELTIDIGADAKDWAAVQSTEKLKPVETELRRIEETVGEIVAEMEYLRSREQKLRDTNESTNTRVKWFAFSSMGMLISLGIWQIFYLRAYFR 213
                  ********************************************************************************************6 PP

>> EzrA  Septation ring formation regulator, EzrA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   1.2e-05      0.11      85     141 ..     126     182 ..     116     188 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 1.2e-05
                 GGGT--S-SHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTTHHHHHHH CS
        EzrA  85 feaeelldkykfkkakkklaeleeeldeveekikkileelkelteseeknreeiekl 141
                 +++ ++++     ++++kl+ +e+el ++ee++ +i +e++ l++ e+k r+  e+ 
  KHJ33012.1 126 IDIGADAKDWAAVQSTEKLKPVETELRRIEETVGEIVAEMEYLRSREQKLRDTNEST 182
                 5666777777888999*********************************99876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       697  (0.0388756); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 1682.97
//
Query:       KHJ33013.1  [L=106]
Description: hypothetical protein EV44_g2523 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 790.01
//
Query:       KHJ33014.1  [L=677]
Description: putative atp-dependent rna helicase has1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-46  156.4   0.0    1.2e-45  155.4   0.0    1.5  1  DEAD        DEAD/DEAH box helicase
    1.6e-23   83.2   0.0    1.8e-22   79.8   0.0    2.7  3  Helicase_C  Helicase conserved C-terminal domain
    4.9e-20   71.5   0.3    9.8e-20   70.5   0.3    1.5  1  DUF4217     Domain of unknown function (DUF4217)
  ------ inclusion threshold ------
        7.8    4.3  24.0         14    3.5  24.0    1.3  1  Dicty_REP   Dictyostelium (Slime Mold) REP protein


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.4   0.0   2.7e-49   1.2e-45       1     176 []     222     394 ..     222     394 .. 0.95

  Alignments for each domain:
  == domain 1  score: 155.4 bits;  conditional E-value: 2.7e-49
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS..TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet..kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldng 97 
                 t+iQ++ ip +l g+dvl+aa+TGsGKTl flip+++ +y+   k ++g+ +++v+PtreLa q++  +++++ + + ++  +igg ++r + +kl +g
  KHJ33014.1 222 TEIQRRGIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLYSLrfKPRNGTGVIVVSPTRELALQIFGVARELMTHHSQTYGIVIGGANRRAEAEKLTKG 320
                 79**************************************9999999***************************988777799**************** PP

                 CSEEEEEHHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHHHH CS
                 xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  98 vdivvgtpgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvkkl 176
                 v+++++tpgrl+d+l +t+ + +++++ lV+DEadr+l+ gf+d++++i++ lp      k +rq++++SAT +++v++l
  KHJ33014.1 321 VNLLIATPGRLLDHLqNTKGFVFKNLKALVIDEADRILEIGFEDEMRQIIKILP------KDDRQTMLFSATQTTKVEDL 394
                 *************9977888*********************************5......46788*********999875 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       1.3   5.7e+03      14      72 ..     268     326 ..     257     328 .. 0.43
   2 ?   -1.4   0.0      0.67     3e+03       4      31 ..     367     393 ..     364     421 .. 0.72
   3 !   79.8   0.0     4e-26   1.8e-22       6     110 ..     436     539 ..     431     540 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 1.3
                 TTTSEEEEEESSHH.HHHH...HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEE CS
  Helicase_C  14 eeggkilifvntid.rlek...vklllekkgikvavlhgelpqnereeileqfnkgesdvLia 72 
                 ++g  ++++++t++  l+    ++ l ++++ ++ ++   +   +r++  e+  k  +++Lia
  KHJ33014.1 268 RNGTGVIVVSPTRElALQIfgvARELMTHHSQTYGIV---IGGANRRAEAEKLTK-GVNLLIA 326
                 5566677777777743322233222222222222222...333444444444423.3456665 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.67
                 HHHHHHHHHTTTTSEEEEEESSHH.HHHH CS
  Helicase_C   4 eallellkleeeggkilifvntid.rlek 31 
                 ++++++l   ++++++++f+ t++ ++e+
  KHJ33014.1 367 RQIIKIL--PKDDRQTMLFSATQTtKVED 393
                 5667776..78999999999998866653 PP

  == domain 3  score: 79.8 bits;  conditional E-value: 4e-26
                 HHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHH CS
  Helicase_C   6 llellkleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqr 103
                 l  +l +++ ++k+++f  ++  ++  ++ll +  ++ v+ lhg+ +q++r  ++ +f + ++  Li+tdva+rG+dip+v+ +i+fd+p+++++yi+r
  KHJ33014.1 436 LFSFL-KRNLKKKTIVFFSSCACVKYnAELL-NYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPDVDWIIQFDPPDDPRDYIHR 532
                 55566.78889***********886655555.5559**********************999999*********************************** PP

                 HTTSSST CS
  Helicase_C 104 iGRtgRa 110
                 +GRt+R+
  KHJ33014.1 533 VGRTARG 539
                 ******7 PP

>> DUF4217  Domain of unknown function (DUF4217)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.5   0.3   2.2e-23   9.8e-20       1      61 []     581     641 ..     581     641 .. 0.98

  Alignments for each domain:
  == domain 1  score: 70.5 bits;  conditional E-value: 2.2e-23
     DUF4217   1 iqqkleslcakdrdlkelAqkAfvsyvraYsvhlakeiFrvkkLdlealAksfGLleaPki 61 
                 +q++le+l+a++++l+++A+++++sy++aY++h++++iF+v+kLdl ++A+sfG+  +P++
  KHJ33014.1 581 VQSQLEKLIAQNYYLNKSAKDGYKSYLQAYASHSLRSIFDVNKLDLVKVARSFGFEVPPRV 641
                 699********************************************************97 PP

>> Dicty_REP  Dictyostelium (Slime Mold) REP protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5  24.0     0.003        14     230     334 ..      48     160 ..      43     194 .. 0.62

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.003
   Dicty_REP 230 sdieqesiesentqrensqpskeknkttttttt...tttttsqartrkrkaidddklsenqakekkknskksdddpqsdfskkssrksgslkdvrvdni 325
                 +++eq++i+s++++r++++ +ke+n+ +++ +t   tt+  ++++ +k+k ++d+k +e++ k+k k+  +++ + +++++++ ++k+ +l + +v++ 
  KHJ33014.1  48 KKMEQTNITSKKRKRKQINSEKEENEAVKNSSTkvqTTIPGPEETDEKSKDKKDKKNKEKLRKKKVKTDVNNEGEEKNNRNDQEEEKQ-KLSKDDVNQQ 145
                 57899*****************999999876651113334455666677767777777777777777666666666555554444433.2333333333 PP

   Dicty_REP 326 s......dseldddv 334
                        ++e ++d+
  KHJ33014.1 146 EypneneNEEENEDE 160
                 322211111222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (677 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2756  (0.153717); expected 358.6 (0.02)
Passed bias filter:                      717  (0.0399911); expected 358.6 (0.02)
Passed Vit filter:                       193  (0.0107647); expected 17.9 (0.001)
Passed Fwd filter:                        36  (0.00200792); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.12u 0.38s 00:00:01.50 Elapsed: 00:00:00.52
# Mc/sec: 3891.17
//
Query:       KHJ33015.1  [L=777]
Description: putative at hook domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.5e-11   43.5   0.3    1.4e-10   41.6   0.3    2.1  1  JmjC         JmjC domain, hydroxylase
    5.8e-08   32.9  11.5    5.8e-08   32.9  11.5    2.9  2  zf-4CXXC_R1  Zinc-finger domain of monoamine-oxidase A repres
  ------ inclusion threshold ------
      0.038   13.7   0.0      0.078   12.7   0.0    1.4  1  Cupin_2      Cupin domain
        2.3    6.0   7.4        3.5    5.4   7.4    1.2  1  PolC_DP2     DNA polymerase II large subunit DP2


Domain annotation for each model (and alignments):
>> JmjC  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.3   3.1e-14   1.4e-10       1     113 [.     209     327 ..     209     328 .. 0.80

  Alignments for each domain:
  == domain 1  score: 41.6 bits;  conditional E-value: 3.1e-14
                 EEEEE-TT-EEEEE--GGG-EEEEE.........EEEES-EEEEEE-GGGHHHHHHHHHHHHHCCSTTG.CCTTTCEE-HHHHHHTT---EEEEE-TT- CS
        JmjC   1 wlylgmpksttpwhiedqglySiny.........lhfgapkvWyiipeekkeklekvlskknskeqpdl.lrhkstlispkqlekegipvyrfvqkpge 89 
                 ++y+g ++++t++h+e++++   n+         + ++++ +W++++++++e + +  s    +    + +  ++ + + +  +k+ ++v+ ++qk g+
  KHJ33015.1 209 MCYVGHEGTYTAAHREMCATIGHNImveaskdfgDEIEGSSIWFMTETKEREDILDYFSAVL-G----HdVDVEKHFAQINAWKKAPFKVWVVEQKVGD 302
                 58******************994441122222224567889**************9999996.3....4455555555566678899************ PP

                 EEEE-TT-EEEEEESSS.EEEEEEE CS
        JmjC  90 fVfvfpgayHsvfnlgf.niaeavn 113
                 +V+++p a+H+v+n g+ +i++a+n
  KHJ33015.1 303 LVIIPPLAPHQVWNRGTrTIKVAWN 327
                 ***************9768999998 PP

>> zf-4CXXC_R1  Zinc-finger domain of monoamine-oxidase A repressor R1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   4.4     0.025   1.1e+02       5      42 ..     425     467 ..     423     493 .. 0.76
   2 !   32.9  11.5   1.3e-11   5.8e-08       6      83 ..     592     668 ..     588     686 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.025
  zf-4CXXC_R1   5 kgttChqCrqktletktsCkakeCk.......saklkfCekClkn 42 
                  +g+tC +Cr    ++  +C  k C+         +  +C +C  +
   KHJ33015.1 425 SGVTCSYCRCNIFNRFLTC--KACSsddlgvaGDTFDICMDCYVM 467
                  699****************..677766776666678889988654 PP

  == domain 2  score: 32.9 bits;  conditional E-value: 1.3e-11
  zf-4CXXC_R1   6 gttChqCrqktletk.tsCkakeCksaklkfCekClknRygeeveevaakkeWvCPkCrgiCncslcrk...kkglaptgql 83 
                   + Ch+C ++  + k + C  ++C    l+fC + l+ ++    + v+a+++W+CP+C +iC c +c+k   +k  +p ++l
   KHJ33015.1 592 KSRCHFCNRQDWNWKmAFC--SSCC---LAFCYNVLWLKFDLMPQIVMADNKWRCPRCLNICSCKNCQKisvQKPYQPKKML 668
                  568****776666551556..6666...9***************************************95444444555544 PP

>> Cupin_2  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.7e-05     0.078      42      67 ..     299     324 ..     294     327 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.7e-05
                 ETTEEEEE-TT-EEEEEE-SSS-EEE CS
     Cupin_2  42 eaGdsvyfpagtpHrfrNtgdeparl 67 
                 + Gd+v++p+  pH++ N+g+   ++
  KHJ33015.1 299 KVGDLVIIPPLAPHQVWNRGTRTIKV 324
                 78******************988776 PP

>> PolC_DP2  DNA polymerase II large subunit DP2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   7.4   0.00077       3.5     598     704 ..     571     687 ..     559     694 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.00077
    PolC_DP2 598 krrsvkeaakkkgeieveiar.rkCkkCgketlearCeeCgekteeklvC...........kkceeeveeekcekcekeakavkkkkidlkellekale 684
                 +rr+ k+ ++k++++e+eia+  +C+ C+++ ++ + + C + +     C           +++ ++ ++ +c++c +  ++++ +ki +++ ++    
  KHJ33015.1 571 RRRKPKSNISKNKNTELEIANkSRCHFCNRQDWNWKMAFCSSCCLA--FCynvlwlkfdlmPQIVMADNKWRCPRCLNICSCKNCQKISVQKPYQPKKM 667
                 445555566668888999986268********99998888887776..665667777776666666666667*************************** PP

    PolC_DP2 685 klgereekleelkgvkglts 704
                  lg +++k+ ++++v+ l++
  KHJ33015.1 668 LLGHNTKKVADFRSVESLID 687
                 ****************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (777 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       964  (0.0537676); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 5236.96
//
Query:       KHJ33016.1  [L=103]
Description: hypothetical protein EV44_g3656 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       452  (0.0252106); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 806.68
//
Query:       KHJ33017.1  [L=220]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.20s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1870.89
//
Query:       KHJ33018.1  [L=100]
Description: hypothetical protein EV44_g3409 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-17   64.0   5.6    1.7e-17   63.8   5.6    1.1  1  Stc1      Stc1 domain
  ------ inclusion threshold ------
       0.07   13.6   3.0        0.1   13.0   3.0    1.3  1  DUF3795   Protein of unknown function (DUF3795)
      0.074   13.2   3.7        2.8    8.1   0.2    2.1  2  Zf_RING   KIAA1045 RING finger
       0.29   10.8   2.7        3.4    7.3   0.5    2.0  2  CDH-cyt   Cytochrome domain of cellobiose dehydrogenase


Domain annotation for each model (and alignments):
>> Stc1  Stc1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.8   5.6   3.7e-21   1.7e-17       2      80 ..      15      95 ..      14      97 .. 0.92

  Alignments for each domain:
  == domain 1  score: 63.8 bits;  conditional E-value: 3.7e-21
                -SSS--EEETTTS-HHHHHTTTTEEEE-S-.......----TTTS-----EEE-S.SS--EEESTTS-HHHHHS.SS--.- CS
        Stc1  2 CkeckkkkplseFSkkqlkklekklaeekakvkkakskikCkectakqateleCs.aCqktkpldeFsksqrrkpdaar.C 80
                C++c k+k +++FS+k+l k++ + ++++++v+++++k++C+ ct+++a eleC  +C ktk l+eFsk+ r++ +++  C
  KHJ33018.1 15 CRVCTKWKRKTQFSNKELGKFTFRNQNSATQVTPITAKLRCRGCTGEAAHELECLgPCAKTKLLNEFSKAARKSGGSNVfC 95
                *********************7777667889******************************************98776555 PP

>> DUF3795  Protein of unknown function (DUF3795)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   3.0   2.3e-05       0.1       8      64 ..      14      73 ..      12      84 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.3e-05
     DUF3795  8 dCeeCeayeakekeekkkkkk......eafeelllaleeikCeGCreeekkalaeeCkirkCa 64
                 C+ C++ ++k++ ++k+  k      +++++++  +++ +C+GC+ e  + l++      Ca
  KHJ33018.1 14 LCRVCTKWKRKTQFSNKELGKftfrnqNSATQVTPITAKLRCRGCTGEAAHELECL---GPCA 73
                6999999999877666655558898766667777788999******9999887543...3344 PP

>> Zf_RING  KIAA1045 RING finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.2   0.00062       2.8      18      31 ..      11      24 ..       5      49 .. 0.66
   2 ?    6.9   0.4    0.0015       6.7      16      64 ..      49      96 ..      40     100 .] 0.79

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00062
     Zf_RING 18 elypCRvCtkvfHe 31
                e++ CRvCtk   +
  KHJ33018.1 11 EKFLCRVCTKWKRK 24
                67778888875443 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0015
     Zf_RING 16 aeelypCRvCt.kvfHegClrklgylqdesalellkrAktetGWsCaeCd 64
                  +++ CR Ct    He  l+ lg + + + l+   +A  + G s   C+
  KHJ33018.1 49 ITAKLRCRGCTgEAAHE--LECLGPCAKTKLLNEFSKAARKSGGSNVFCE 96
                567899****8345666..6777889999999999999999999998887 PP

>> CDH-cyt  Cytochrome domain of cellobiose dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.5   0.00075       3.4     113     134 ..      12      33 ..       2      46 .. 0.74
   2 ?    4.3   0.1    0.0062        28     103     122 ..      42      61 ..      33      70 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00075
                 EEEEET-SEEEETTEEEE--TT CS
     CDH-cyt 113 tfrCqgClsweqggtsgsasts 134
                  f+C+ C++w+ +++ ++++++
  KHJ33018.1  12 KFLCRVCTKWKRKTQFSNKELG 33 
                 69********866666666553 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.0062
                 EEE-SSEEEEEEEEET-SEE CS
     CDH-cyt 103 tsvnathftltfrCqgClsw 122
                 +++  t +t+  rC+gC+  
  KHJ33018.1  42 SATQVTPITAKLRCRGCTGE 61 
                 55666999*********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       666  (0.0371465); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 735.28
//
Query:       KHJ33019.1  [L=400]
Description: putative nuclear distribution protein nude [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.9e-38  131.7   9.2    3.9e-38  131.7   9.2    3.2  2  NUDE_C          NUDE protein, C-terminal conserved region
      7e-05   22.9  28.2     0.0026   17.8  12.1    3.8  4  CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein C
    0.00093   19.6   6.9    0.00093   19.6   6.9    4.5  4  ZapB            Cell division protein ZapB
  ------ inclusion threshold ------
      0.018   14.9  28.8      0.032   14.1  22.7    2.6  2  ERM             Ezrin/radixin/moesin family
       0.03   14.8  24.1       0.36   11.3  10.7    3.3  3  Fez1            Fez1
      0.031   15.4   2.9      0.031   15.4   2.9    4.0  4  SOGA            Protein SOGA
      0.039   14.1  28.3       0.44   10.7  17.3    3.7  3  Tropomyosin_1   Tropomyosin like
        0.3   11.2  30.6       0.29   11.2   6.0    4.3  4  TPR_MLP1_2      TPR/MLP1/MLP2-like protein
       0.72    9.2  29.5        1.7    8.0   2.9    3.6  3  GAS             Growth-arrest specific micro-tubule binding
        1.1    9.1  11.0         23    4.8   0.0    3.2  2  EMP24_GP25L     emp24/gp25L/p24 family/GOLD
        1.2    7.9  17.2       0.97    8.2   8.8    2.4  2  Fmp27_WPPW      RNA pol II promoter Fmp27 protein domain
        1.2    7.9  24.8        5.3    5.8  22.4    2.0  2  CALCOCO1        Calcium binding and coiled-coil domain (CALCO
        2.4    8.8  18.3         29    5.3   3.7    4.0  3  BST2            Bone marrow stromal antigen 2
        2.8    8.6  21.3       0.21   12.3   5.2    3.8  3  YabA            Initiation control protein YabA
          3    8.8  27.0       0.27   12.1  13.4    3.5  4  PRKG1_interact  cGMP-dependent protein kinase interacting dom
        3.1    8.4  34.0       0.12   12.9   8.1    3.8  4  APG6_N          Apg6 coiled-coil region
        6.6    6.9  26.6      0.036   14.2   3.8    3.9  4  DMPK_coil       DMPK coiled coil domain like
          7    6.3  27.6         15    5.1   4.1    3.5  3  Lebercilin      Ciliary protein causing Leber congenital amau
        7.3    6.7  27.6        1.7    8.7   3.7    4.1  5  ADIP            Afadin- and alpha -actinin-Binding
        8.5    6.5  35.4        1.6    8.9  17.4    3.2  3  ATG16           Autophagy protein 16 (ATG16)


Domain annotation for each model (and alignments):
>> NUDE_C  NUDE protein, C-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   5.6       2.9   2.6e+03      30      73 ..      71     116 ..      50     137 .. 0.60
   2 !  131.7   9.2   4.4e-41   3.9e-38       1     149 [.     138     277 ..     138     311 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2.9
      NUDE_C  30 r.EsLrievQRLrDelsDLkveleiiqeklrkaeeklr.rrkplsl 73 
                 + E Lr ev   +   +  kve+ + q  l+k+ ++lr + + l l
  KHJ33019.1  71 KvEGLRYEVDEWKAKYKQAKVEASVAQSALQKEITTLRdASRTLQL 116
                 2377888888888888889999999999999965554312333333 PP

  == domain 2  score: 131.7 bits;  conditional E-value: 4.4e-41
      NUDE_C   1 SLEDlEskyNqaIERnvllEeeikagEqErEsLrievQRLrDelsDLkveleiiqeklrkaeeklrrrkplslsspstp.qsleiekrspavqasssPv 98 
                 S+EDlEskyN+aIER+vl+Eeeik +EqErE+Lrie+QRLrDels+ k+e++++q+k rk ++         l++++   +  + +  sp+ +  ss +
  KHJ33019.1 138 SMEDLESKYNMAIERAVLMEEEIKFSEQERENLRIENQRLRDELSNAKIEADVMQDKFRKLQSF--------LTATTITtNIHNDDSFSPDKSL-SSSM 227
                 89*******************************************************9996665........3333333245666777888887.7777 PP

      NUDE_C  99 iatppekslsslatgsetatppsPpasessdllrkvlaltsklarqrasis 149
                 i+tpp+ + +++ + +  +tpps+p+sess  ++ + ++   ++++r  + 
  KHJ33019.1 228 ISTPPDPKSTEFIKPG-HETPPSTPISESSGPMKASANTPTRVPKSRSRLR 277
                 8899988856666555.69********************999*99997664 PP

>> CENP-F_leu_zip  Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.4      0.29   2.6e+02      59      90 ..      24      55 ..      12      60 .. 0.51
   2 !   17.8  12.1   2.9e-06    0.0026      11     102 ..      57     145 ..      46     155 .. 0.89
   3 !    9.8   4.5   0.00084      0.75      26      77 ..     153     204 ..     149     211 .. 0.92
   4 ?    0.4   0.0      0.69   6.1e+02      60      80 ..     341     361 ..     333     382 .. 0.68

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.29
  CENP-F_leu_zip 59 eeieelaeelreleldLvalrsekeeLekelq 90
                    + +   +++ ++ e+dL++++    +Le el+
      KHJ33019.1 24 DSLAYYKSQYEQVEHDLAEFQASSHQLEIELE 55
                    44444444444444444444444444444444 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 2.9e-06
  CENP-F_leu_zip  11 kLKeserkadsLkdkvenLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLvalrsekeeLekelqkkqervseLesl 102
                        ++e+++  Lk+kve+L  e+ + +++  ++++ea  ++   ++l++ei +l+   r l+l+L ++  e+++ e++ ++  + +++Les 
      KHJ33019.1  57 DVEAAEKRERILKEKVEGLRYEVDEWKAKYKQAKVEASVAQ---SALQKEITTLRDASRTLQLKLRDVEVENDDFERQARNTSSSMEDLESK 145
                     55678899999************************999887...57999*****************************************74 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00084
  CENP-F_leu_zip  26 venLerelemseenqekvileaEtskaevetlkeeieelaeelreleldLva 77 
                     +  +e e++ se+++e++ +e    + e+++ k e + ++ + r+l++ L+a
      KHJ33019.1 153 AVLMEEEIKFSEQERENLRIENQRLRDELSNAKIEADVMQDKFRKLQSFLTA 204
                     5569******************************************998876 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.69
  CENP-F_leu_zip  60 eieelaeelreleldLvalrs 80 
                     +i+ l++++++le+ +++ rs
      KHJ33019.1 341 HIRSLTAQMQRLEQRVQSARS 361
                     344455555555554444443 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   4.0      0.21   1.9e+02       9      43 ..      54      88 ..      21      98 .. 0.65
   2 !    7.3   1.9    0.0073       6.5      21      58 ..      98     135 ..      88     140 .. 0.71
   3 !   19.6   6.9     1e-06   0.00093       6      65 ..     139     198 ..     134     200 .. 0.95
   4 ?    2.2   0.1      0.28   2.5e+02       5      16 ..     348     359 ..     336     363 .. 0.58

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.21
        ZapB  9 LEskiqkaidtitlLqmeieeLkeeneelkeenre 43
                LE+ +++a  + + L++++e L+ e+ e k + ++
  KHJ33019.1 54 LEKDVEAAEKRERILKEKVEGLRYEVDEWKAKYKQ 88
                44444444444444444444444444444444444 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0073
        ZapB  21 tlLqmeieeLkeeneelkeenreleeeneqlkeereaw 58 
                 ++Lq+ei  L+  +++l+ + r +e en+ ++ +  ++
  KHJ33019.1  98 SALQKEITTLRDASRTLQLKLRDVEVENDDFERQARNT 135
                 56899999999999999999999998888776655554 PP

  == domain 3  score: 19.6 bits;  conditional E-value: 1e-06
        ZapB   6 LeqLEskiqkaidtitlLqmeieeLkeeneelkeenreleeeneqlkeereawqerlkkL 65 
                 +e LEsk+++ai++  l+ +ei+  ++e e+l  en++l+ e+++ k e   +q++ +kL
  KHJ33019.1 139 MEDLESKYNMAIERAVLMEEEIKFSEQERENLRIENQRLRDELSNAKIEADVMQDKFRKL 198
                 799**********************************************99999999987 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.28
        ZapB   5 lLeqLEskiqka 16 
                 ++++LE+++q+a
  KHJ33019.1 348 QMQRLEQRVQSA 359
                 445555555554 PP

>> ERM  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   4.0      0.17   1.5e+02       9      54 ..      21      66 ..      14      77 .. 0.79
   2 ?   14.1  22.7   3.5e-05     0.032       1     153 [.      59     225 ..      59     362 .. 0.69

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.17
         ERM  9 eleerLkqlqeeaekaqeaLreseetaelLaekarraeeeaelLeq 54
                 le+ L  ++++ e+ +++L e +  +++L+ ++++  e+ae+ e+
  KHJ33019.1 21 TLEDSLAYYKSQYEQVEHDLAEFQASSHQLEIELEKDVEAAEKRER 66
                5788899999999999999999999999999888877777766554 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 3.5e-05
         ERM   1 eeaerekreleerLkqlqeeaekaqeaLrese....etaelLaekarraeeeaelLeqkaaeaeeeiqrlkesaekeeeekeklerklreaeleaarle 95 
                 e+ae+++r l+e+ + l+ e+++ +++ ++++         L+++   ++ +++ L+ k +++e e++ ++++a+++ ++ e+le k + a ++a  +e
  KHJ33019.1  59 EAAEKRERILKEKVEGLRYEVDEWKAKYKQAKveasVAQSALQKEITTLRDASRTLQLKLRDVEVENDDFERQARNTSSSMEDLESKYNMAIERAVLME 157
                 567788888888777766666554444444330000344567788888888888888888888888888888888888888888888888888888888 PP

         ERM  96 eeserkeeeaerLkeeleeareaeeeak..........ekllealstpskseseenveeseteeeeen 153
                 ee +  e+e e+L+ e ++ r+++ +ak          +kl+ +l++++ +++ +n ++ + +++ ++
  KHJ33019.1 158 EEIKFSEQERENLRIENQRLRDELSNAKieadvmqdkfRKLQSFLTATTITTNIHNDDSFSPDKSLSS 225
                 77777777777777777776666644443333333333677777777744333333333333333333 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   5.2     0.014        12      38     110 ..      24      93 ..      12     102 .. 0.65
   2 ?   11.3  10.7    0.0004      0.36      30     119 ..     101     190 ..      91     219 .. 0.75
   3 ?    1.9   0.0       0.3   2.7e+02      39      60 ..     341     362 ..     284     370 .. 0.64

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.014
        Fez1  38 aqlrelrakleekeeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselslee 110
                  +l   +++ e+ e+ + e+++s+++ + e   +e++++ +++++ +l+ekve l  e+ e + ++++++ e+
  KHJ33019.1  24 DSLAYYKSQYEQVEHDLAEFQASSHQLEIE---LEKDVEAAEKRERILKEKVEGLRYEVDEWKAKYKQAKVEA 93 
                 444445555556666666666555555554...3455666688889999999999999999999888866543 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.0004
        Fez1  30 lseivalkaqlrelrakleekeeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaalesde 119
                  +ei +l+   r l+ kl++ e e++++e ++++ + ++e +e++ + + ++a l++e+++  e+e ++lr e ++l  e ++a++e+d 
  KHJ33019.1 101 QKEITTLRDASRTLQLKLRDVEVENDDFERQARNTSSSMEDLESKYNMAIERAVLMEEEIKFSEQERENLRIENQRLRDELSNAKIEADV 190
                 68*********************************************9977777777777777777777766555544443333333332 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.3
        Fez1  39 qlrelrakleekeeeikelees 60 
                 ++r l+a++++ e+++++++++
  KHJ33019.1 341 HIRSLTAQMQRLEQRVQSARSK 362
                 3444444445444444444444 PP

>> SOGA  Protein SOGA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   2.9   3.4e-05     0.031      32      91 ..      21      78 ..       9      82 .. 0.88
   2 ?    4.1   0.7      0.11     1e+02      55      92 ..      88     125 ..      78     130 .. 0.78
   3 ?    0.4   7.9       1.6   1.5e+03      55      89 ..     150     199 ..     100     201 .. 0.53
   4 ?   -1.3   0.0       5.8   5.2e+03      29      50 ..     341     362 ..     322     382 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 3.4e-05
        SOGA 32 qlteeLnkyksklgeeessleeeeeassdsskeaelkeeLklarlqineLsgkvvkLqve 91
                 l+  L+ yks+++++e+ l+e   ++s+++ e el++ +++a++  ++L+ kv  L +e
  KHJ33019.1 21 TLEDSLAYYKSQYEQVEHDLAE--FQASSHQLEIELEKDVEAAEKRERILKEKVEGLRYE 78
                46677*************9988..8899999***************************99 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.11
        SOGA  55 eeassdsskeaelkeeLklarlqineLsgkvvkLqven 92 
                 +++ ++s  +++l++e+ + r   ++L+ k+   +ven
  KHJ33019.1  88 QAKVEASVAQSALQKEITTLRDASRTLQLKLRDVEVEN 125
                 35566777889999999999999999999999999999 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 1.6
        SOGA  55 e...............eassdsskeaelkeeLklarlqineLsgkvvkLq 89 
                                 e+++   +++ l++eL  a+ +++ ++ k  kLq
  KHJ33019.1 150 IeravlmeeeikfseqERENLRIENQRLRDELSNAKIEADVMQDKFRKLQ 199
                 14444444445555434445556777888888888888888888888887 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 5.8
        SOGA  29 enkqlteeLnkyksklgeeess 50 
                 + ++lt +++++    ++ +s+
  KHJ33019.1 341 HIRSLTAQMQRLEQRVQSARSK 362
                 4455666666665555555554 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7  17.3   0.00049      0.44      25     135 ..      46     150 ..      16     153 .. 0.81
   2 ?    2.8   3.6      0.14   1.2e+02      12      63 ..     149     200 ..     147     216 .. 0.79
   3 ?    4.9   0.0     0.031        28      36      58 ..     341     363 ..     333     381 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00049
  Tropomyosin_1  25 eleqenlekeqeiksLtkknqqleeevekleeklkeakekaeesekkktnne.altrkiqlLEeeleesdkkLkettekLretdvkaeelERkvka 119
                    +  q ++e e++++  +k+ + l e+ve l  ++ e k+k ++++ +++ +  al++ i  L     +++++L+    kLr+++v+ +++ER+ ++
     KHJ33019.1  46 SSHQLEIELEKDVEAAEKRERILKEKVEGLRYEVDEWKAKYKQAKVEASVAQsALQKEITTLR----DASRTLQ---LKLRDVEVENDDFERQARN 134
                    2345567788999999***************************99999988879*****9975....5677775...6****************** PP

  Tropomyosin_1 120 Leqerdewekkyeele 135
                      ++ ++ e+ky+ + 
     KHJ33019.1 135 TSSSMEDLESKYNMAI 150
                    ************9765 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.14
  Tropomyosin_1  12 aqekaeeleekvKeleqenlekeqeiksLtkknqqleeevekleeklkeake 63 
                    a e+a  +ee++K  eqe+++   e + L   ++++  e + +++k ++ ++
     KHJ33019.1 149 AIERAVLMEEEIKFSEQERENLRIENQRLRDELSNAKIEADVMQDKFRKLQS 200
                    6789999999999999999888888888988888888888888887766655 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.031
  Tropomyosin_1  36 eiksLtkknqqleeevekleekl 58 
                    +i+sLt ++q le+ v  + +kl
     KHJ33019.1 341 HIRSLTAQMQRLEQRVQSARSKL 363
                    799*************9999988 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   6.0   0.00032      0.29      58     117 ..      25      84 ..      18      88 .. 0.93
   2 ?    0.2  12.6      0.79   7.1e+02      40     126 ..      95     181 ..      85     184 .. 0.50
   3 ?    2.5   2.9      0.16   1.4e+02       7      45 ..     157     195 ..     151     200 .. 0.58
   4 ?    2.3   0.1      0.19   1.7e+02      60      86 ..     343     362 ..     335     366 .. 0.42

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00032
  TPR_MLP1_2  58 elqalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekriedlne 117
                 +l+ +++++++++ ++ae++a+  +++ ele+  e+ e+++  l+++++ l+  +++ ++
  KHJ33019.1  25 SLAYYKSQYEQVEHDLAEFQASSHQLEIELEKDVEAAEKRERILKEKVEGLRYEVDEWKA 84 
                 57789**********************************************999999876 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.79
  TPR_MLP1_2  40 eaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesak..........aeleeseesweeqkeelekelselekriedlneqNklLhdQl 126
                  a          +++  ke+++lr+ + +l+ ++++++ e+++ +          ++le + +   e+   +e+e++ +e+ +e+l   N+ L d l
  KHJ33019.1  95 VA----------QSALQKEITTLRDASRTLQLKLRDVEVENDDFErqarntsssmEDLESKYNMAIERAVLMEEEIKFSEQERENLRIENQRLRDEL 181
                 33..........4444455555555555555444444444444440000000000444444444456666677777777777777777777776655 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.16
  TPR_MLP1_2   7 eeeikslkeekeeaeaklqklqedlekqaeiakeaqqkY 45 
                 eeeik  ++e e+++ + q l+++l + + +a  +q+k+
  KHJ33019.1 157 EEEIKFSEQERENLRIENQRLRDELSNAKIEADVMQDKF 195
                 555555555555566666666666665555555555554 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.19
  TPR_MLP1_2  60 qalreelnelkaeiaelkaeaesakae 86 
                 ++l       +a+++ l+++++sa+++
  KHJ33019.1 343 RSL-------TAQMQRLEQRVQSARSK 362
                 233.......33333333333333332 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  15.6    0.0098       8.8      42     149 ..      51     152 ..      21     155 .. 0.61
   2 ?    8.0   2.9    0.0018       1.7      77     119 ..     160     199 ..     150     206 .. 0.70
   3 ?   -0.9   0.1      0.99   8.9e+02      25      45 ..     339     359 ..     335     364 .. 0.50

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0098
         GAS  42 eernekelseisqenkrlkepLkkaeeeveeLrkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvekerdelykkfeaaiqevqqkt 140
                 e + ek++++++++ + lke+++ ++ ev+e +++ k+ +       ++    + l+ke+++l+  ++ l+ ++  ve e d+++++ +++   +    
  KHJ33019.1  51 EIELEKDVEAAEKRERILKEKVEGLRYEVDEWKAKYKQAKV------EASVAQSALQKEITTLRDASRTLQLKLRDVEVENDDFERQARNTSSSMEDLE 143
                 33456666666666666666666666666666655544332......3334445567788888888888888888888888888877777766666665 PP

         GAS 141 glknllLek 149
                 +  n+ +e+
  KHJ33019.1 144 SKYNMAIER 152
                 555655555 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0018
         GAS  77 lknyekdkqslknlkarlkelekelkdlkwehevleqrfekve 119
                 +k+ e+++   +nl+ ++++l +el++ k e++v++++f k++
  KHJ33019.1 160 IKFSEQER---ENLRIENQRLRDELSNAKIEADVMQDKFRKLQ 199
                 44444433...46677777778888888888888888888887 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.99
         GAS  25 LelIkslKeeieelkkkeern 45 
                 L+ I+sl  ++++l+++ +++
  KHJ33019.1 339 LTHIRSLTAQMQRLEQRVQSA 359
                 455555555555555544443 PP

>> EMP24_GP25L  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2  13.1       7.6   6.9e+03      95     150 ..     121     176 ..      33     183 .. 0.79
   2 ?    4.8   0.0     0.026        23      62     132 ..     280     361 ..     263     364 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 7.6
  EMP24_GP25L  95 ievgseasdykdsakkekletleselkkleekldsikreqkylrereerlrdtnes 150
                  +ev++++ + ++ ++++++e+les+ +  +e+   +++e+k+ ++  e+lr  n+ 
   KHJ33019.1 121 VEVENDDFERQARNTSSSMEDLESKYNMAIERAVLMEEEIKFSEQERENLRIENQR 176
                  22233322355566699***************************999999987765 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.026
  EMP24_GP25L  62 egdfsftakesgeykvCfdnsfstksskkvsfdievgseasd..............ykdsakkekletleselkkleekldsikr 132
                  +gdfs t k + +y+  f ns  +   +  s + +++s+ ++                +s+  +++ +l+ ++++le++++s ++
   KHJ33019.1 280 SGDFSATPKATARYSSGFRNSLGS---AVTSRNARTRSATPSvirhtkskapatrgLPNSNSLTHIRSLTAQMQRLEQRVQSARS 361
                  468888888888999999987665...3444444443333334444444555666678899999****************99875 PP

>> Fmp27_WPPW  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   8.8    0.0011      0.97     173     261 ..      58     147 ..      20     161 .. 0.59
   2 ?    3.5   3.3     0.028        25     176     246 ..     149     215 ..     143     242 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0011
  Fmp27_WPPW 173 kelleeRleeleeqiekleekleelelksekedeelkeeieelekeikelkeklefletlledlkeseesse.eeeskskelsaastses 261
                  e +e+R + l+e++e l+ +++e + k ++ + e +   ++l+kei +l+++ ++l+  l+d++ ++++ e + +++s++ ++ +++++
  KHJ33019.1  58 VEAAEKRERILKEKVEGLRYEVDEWKAKYKQAKVEASVAQSALQKEITTLRDASRTLQLKLRDVEVENDDFErQARNTSSSMEDLESKYN 147
                 455666777777777777777777666666665555555566666666666666666666666666655333222233333334444444 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.028
  Fmp27_WPPW 176 leeRleeleeqiekleekleelelksekedeelkeeieelekeikelkeklefletlledlkeseesseee 246
                 + eR+  +ee+i+  e++ e+l  ++++    l++e+++ + e++++++k + l+++l+ ++++++ ++++
  KHJ33019.1 149 AIERAVLMEEEIKFSEQERENLRIENQR----LRDELSNAKIEADVMQDKFRKLQSFLTATTITTNIHNDD 215
                 5567777777787777777777777766....9**************************999988754422 PP

>> CALCOCO1  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8  22.4    0.0059       5.3      54     225 ..      33     205 ..      21     217 .. 0.81
   2 ?    2.2   0.0     0.073        65     319     340 ..     341     362 ..     334     366 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0059
    CALCOCO1  54 nrqrekekeeykrdreeldrerkelesrveelkeelkesrekveeleekqkelerlseelaeeksalleakeesearirELEeDiktltqralekEteL 152
                  +q+e++  e++  +++l+    ele++ve +++  + ++ekve l+    e+++ +++ ++ k   + a+ + ++ i  L + ++tl  +  + E+e 
  KHJ33019.1  33 YEQVEHDLAEFQASSHQLEI---ELEKDVEAAEKRERILKEKVEGLR---YEVDEWKAKYKQAKVEASVAQSALQKEITTLRDASRTLQLKLRDVEVEN 125
                 56888888888888888875...799999999999999999999998...566667777888888888899999999999999*******999999999 PP

    CALCOCO1 153 eRlkerak......kalaqrkeeeaerkql.qakleqseeelrslskelqelrnslaerdtqvlqLqdtittltqkLttA 225
                 +    +a+        l+ + +   er  l + +++ se+e ++l  e q+lr+ l + + ++  +qd+  +l++ Lt+ 
  KHJ33019.1 126 DDFERQARntsssmEDLESKYNMAIERAVLmEEEIKFSEQERENLRIENQRLRDELSNAKIEADVMQDKFRKLQSFLTAT 205
                 9998888855444333344444455666543678999************************************9999865 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.073
    CALCOCO1 319 rieklsaelqkleealQeerme 340
                 +i+ l+a++q+le+++Q +r++
  KHJ33019.1 341 HIRSLTAQMQRLEQRVQSARSK 362
                 78999************99975 PP

>> BST2  Bone marrow stromal antigen 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   3.7     0.033        29      49      90 ..      21      62 ..      14      97 .. 0.49
   2 ?    4.3   5.9     0.067        60      14      87 ..     106     186 ..      97     190 .. 0.71
   3 ?    2.5   0.0      0.24   2.2e+02      63      89 ..     337     363 ..     307     365 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.033
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC CS
        BST2 49 tLkasLekekaqsqkqqakvqelqgeikkLnqkLqdaeaeve 90
                tL++sL   k+q ++ ++ + e+q   ++L+ +L++  ++ e
  KHJ33019.1 21 TLEDSLAYYKSQYEQVEHDLAEFQASSHQLEIELEKDVEAAE 62
                444444444444444444444444444444444444333322 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.067
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHHH CS
        BST2  14 ecrnvtrlLerqLtqaqeslreaeaqaatcnqtvvtLkasLekekaqsqkqqakv.......qelqgeikkLnqkLqdaea 87 
                  +r+ +r L+ +L+  + +  + e qa   ++ +++L++  ++   ++  +++++       ++l+ e+++L ++L +a+ 
  KHJ33019.1 106 TLRDASRTLQLKLRDVEVENDDFERQARNTSSSMEDLESKYNMAIERAVLMEEEIkfseqerENLRIENQRLRDELSNAKI 186
                 578999*******************************99888876666555544411100014455566666666666655 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.24
                 HHHHHHHHHHHHHHHHHHHHHHHHHHC CS
        BST2  63 kqqakvqelqgeikkLnqkLqdaeaev 89 
                 + +++++ l  ++++L+q++q a+ ++
  KHJ33019.1 337 NSLTHIRSLTAQMQRLEQRVQSARSKL 363
                 5678899999999*****999998765 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   6.8       2.2     2e+03      20      63 ..      29      90 ..      15     136 .. 0.55
   2 ?   12.3   5.2   0.00023      0.21       4      65 ..     133     194 ..     130     205 .. 0.82
   3 ?   -0.2   0.0       1.8   1.6e+03       4      21 ..     343     360 ..     336     367 .. 0.59

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 2.2
                HHHHHHHHHHHHHHHHHHHHHHHHH..................HHHHHHHHXXXXXXXXXXX CS
        YabA 20 lleeleelkeelaelleenaeLele..................neklrerleeeekkekekk 63
                 +++ e+++++lae     ++Le+e                   e lr +++e ++k k+ k
  KHJ33019.1 29 YKSQYEQVEHDLAEFQASSHQLEIElekdveaaekrerilkekVEGLRYEVDEWKAKYKQAK 90
                55555555555555555555555552222222111111111113444444433333333333 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 0.00023
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXX CS
        YabA   4 kelfdkleeleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekekkke 65 
                 ++  +++e+le++ +   e+   ++ee++   +e ++L++en++lr++l++++ +++  + +
  KHJ33019.1 133 RNTSSSMEDLESKYNMAIERAVLMEEEIKFSEQERENLRIENQRLRDELSNAKIEADVMQDK 194
                 56678999*****************************************6655555444444 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 1.8
                 HHHHHHHHHHHHHHHHHH CS
        YabA   4 kelfdkleeleeqleell 21 
                 ++l++++++le+++++  
  KHJ33019.1 343 RSLTAQMQRLEQRVQSAR 360
                 345555555555555544 PP

>> PRKG1_interact  cGMP-dependent protein kinase interacting domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   2.4      0.54   4.9e+02      11      60 ..      17      67 ..      11      84 .. 0.54
   2 ?    1.5   0.7      0.61   5.5e+02      11      40 ..      63      92 ..      58     102 .. 0.61
   3 ?   12.1  13.4   0.00031      0.27       8      89 ..      92     180 ..      81     186 .. 0.74
   4 ?    1.3   0.1      0.71   6.4e+02      13      36 ..     342     365 ..     300     395 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.54
  PRKG1_interact 11 eenerLkreLeelekelselkseleklkqqrqe.svskrssllelekrerr 60
                    + + +L + L   + + ++++  l++ + ++++ +++ ++ +  +ekrer 
      KHJ33019.1 17 SSSLTLEDSLAYYKSQYEQVEHDLAEFQASSHQlEIELEKDVEAAEKRERI 67
                    455667777777777777777777776655433133333333333444333 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.61
  PRKG1_interact 11 eenerLkreLeelekelselkseleklkqq 40
                    + ++ Lk+++e l+ e++e k++ +++k++
      KHJ33019.1 63 KRERILKEKVEGLRYEVDEWKAKYKQAKVE 92
                    444557777777777777777777776644 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 0.00031
  PRKG1_interact   8 eekeenerLkreLeelekelselkseleklkqq....rqesvskrssllelekrerrslerkiseleeel....keleeLraenqrLkdE 89 
                     e+   ++ L++e+++l+   ++l+ +l  ++++    +++  +++ss+ +le++ + ++er +  +eee+    +e e+Lr enqrL+dE
      KHJ33019.1  92 EASVAQSALQKEITTLRDASRTLQLKLRDVEVEnddfERQARNTSSSMEDLESKYNMAIERAVL-MEEEIkfseQERENLRIENQRLRDE 180
                     4444567888888888888888888888888774433333667778888889999999999887.77777555578899**********9 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.71
  PRKG1_interact  13 nerLkreLeelekelselkselek 36 
                      + L +++++le+++++++s+l +
      KHJ33019.1 342 IRSLTAQMQRLEQRVQSARSKLPT 365
                     456677777777777777777665 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   9.6      0.89     8e+02      25      90 ..      30      92 ..      14      97 .. 0.53
   2 ?   12.9   8.1   0.00014      0.12      14      98 ..      68     146 ..      65     154 .. 0.88
   3 ?    3.3   6.3      0.12   1.1e+02      60     120 ..     157     196 ..     143     207 .. 0.47
   4 ?   -1.4   0.0       3.5   3.2e+03      51      64 ..     344     357 ..     323     364 .. 0.54

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.89
      APG6_N 25 rdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLkelekereeleaelaaleee 90
                + +Ye+ ++ l + + ++    + + ele+++e+ ek e+ l e+ + l  e +e +a+ ++++ e
  KHJ33019.1 30 KSQYEQVEHDLAEFQASSH---QLEIELEKDVEAAEKRERILKEKVEGLRYEVDEWKAKYKQAKVE 92
                2333333333333322222...23345666666666666666666666666666666666666655 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 0.00014
      APG6_N  14 ldkqleqaekerdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeee 98 
                 l++++e ++ e d+ ++  k+ k e++          +l++e+ +l+++ ++l+ +L+++e e+++ e++ ++ ++  e+le + 
  KHJ33019.1  68 LKEKVEGLRYEVDEWKAKYKQAKVEASV------AQSALQKEITTLRDASRTLQLKLRDVEVENDDFERQARNTSSSMEDLESKY 146
                 7888999999999999999998888444......5689******************************************99875 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.12
      APG6_N  60 ekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynelqlelleleeeld 120
                 e+e +  ++e ++l  e+++l++el++                      ++e   ++++ +
  KHJ33019.1 157 EEEIKFSEQERENLRIENQRLRDELSN---------------------AKIEADVMQDKFR 196
                 333333333333333333333333333.....................3333333333333 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 3.5
      APG6_N  51 eleeeleklekeee 64 
                 +l  ++++le+  +
  KHJ33019.1 344 SLTAQMQRLEQRVQ 357
                 22222222222222 PP

>> DMPK_coil  DMPK coiled coil domain like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   2.4    0.0088       7.9      19      60 ..      39      84 ..      33      85 .. 0.72
   2 ?   14.2   3.8   4.1e-05     0.036      12      60 ..      96     144 ..      88     145 .. 0.92
   3 ?   -1.7   1.1       3.6   3.3e+03      35      55 ..     161     181 ..     152     190 .. 0.60
   4 ?    0.4   0.1      0.78     7e+02      42      60 ..     343     361 ..     337     362 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0088
   DMPK_coil 19 eLekvkaanlafeskL....keaEkknreLeeeleqLkkemEelra 60
                 L + +a++ + e  L      aEk+ r L+e++e L+ e++e +a
  KHJ33019.1 39 DLAEFQASSHQLEIELekdvEAAEKRERILKEKVEGLRYEVDEWKA 84
                55666666555555552111569******************99887 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 4.1e-05
   DMPK_coil  12 akQslqeeLekvkaanlafeskLkeaEkknreLeeeleqLkkemEelra 60 
                 a+ +lq+e++  ++a+   + kL++ E+ n + e + ++    mE l +
  KHJ33019.1  96 AQSALQKEITTLRDASRTLQLKLRDVEVENDDFERQARNTSSSMEDLES 144
                 6779*****************************************9876 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 3.6
   DMPK_coil  35 keaEkknreLeeeleqLkkem 55 
                 k +E+   +L  e ++L++e+
  KHJ33019.1 161 KFSEQERENLRIENQRLRDEL 181
                 444555555555556666665 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.78
   DMPK_coil  42 reLeeeleqLkkemEelra 60 
                 r L +++++L +++   r+
  KHJ33019.1 343 RSLTAQMQRLEQRVQSARS 361
                 7899999999999877776 PP

>> Lebercilin  Ciliary protein causing Leber congenital amaurosis disease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   4.1     0.017        15     121     188 ..      21      88 ..      11      92 .. 0.93
   2 ?    3.7  12.9     0.048        43       7     109 ..      98     200 ..      91     210 .. 0.55
   3 ?    3.6   0.0     0.053        47      97     139 ..     320     362 ..     304     365 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.017
  Lebercilin 121 eLqkkLeeleakleekeekikeLerkleleeksfrrqlaaekkktkeaqeevkalqeeierlkqklke 188
                 +L+  L+  ++++e+ e+++ e + + +++e + ++ ++a +k+++ ++e+v+ l+ e+++ k k k+
  KHJ33019.1  21 TLEDSLAYYKSQYEQVEHDLAEFQASSHQLEIELEKDVEAAEKRERILKEKVEGLRYEVDEWKAKYKQ 88 
                 6888999999***************************************************9999886 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.048
  Lebercilin   7 sarllkikeLqnelaelqskleelrkEnklLkrlqkrqekaLskyedteaeLpqllarhneEvrvlrerlRksqekerelekklkekeaellrlkdklk 105
                 sa +++i+ L++   +lq kl++++ En   +r+ +  ++ ++ +e++ +   +    ++eE++   ++  +++ ++++l  +l ++  e   ++dk +
  KHJ33019.1  98 SALQKEITTLRDASRTLQLKLRDVEVENDDFERQARNTSSSMEDLESKYNMAIERAVLMEEEIKFSEQERENLRIENQRLRDELSNAKIEADVMQDKFR 196
                 455555566666666666666666666666666666666555555555554444444455555555555555555555555555555555555555555 PP

  Lebercilin 106 klkk 109
                 kl++
  KHJ33019.1 197 KLQS 200
                 5554 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.053
  Lebercilin  97 llrlkdklkklkkLsedknLaereeLqkkLeeleakleekeek 139
                 ++++k+k  + + L +  +L     L+ ++++le+++++++ k
  KHJ33019.1 320 IRHTKSKAPATRGLPNSNSLTHIRSLTAQMQRLEQRVQSARSK 362
                 6678888888888999999999999999999999999988876 PP

>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   2.1    0.0055         5      53     134 ..      42      88 ..      11      95 .. 0.57
   2 ?    4.8   6.4      0.03        27      53     114 ..      42     103 ..      34     123 .. 0.81
   3 ?    2.1   3.5      0.21   1.9e+02      64     111 ..      99     146 ..      88     157 .. 0.64
   4 ?    8.7   3.7    0.0019       1.7      58     117 ..     156     215 ..     148     216 .. 0.92
   5 ?    1.4   0.1      0.33     3e+02      61     128 ..     341     359 ..     333     365 .. 0.43

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0055
        ADIP  53 eqreslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqiktqyah 134
                 e++                                    ++++ e +lek+++++e+  +++ke+++ l+  +++ k++y++
  KHJ33019.1  42 EFQA-----------------------------------SSHQLEIELEKDVEAAEKRERILKEKVEGLRYEVDEWKAKYKQ 88 
                 2333...................................4445555556666666666666666666666666666666654 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.03
        ADIP  53 eqreslnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklkne 114
                 e++ s+++   +le + e  +++ + lk+++e l+ e++ ++ak +q++ +   ++++l++e
  KHJ33019.1  42 EFQASSHQLEIELEKDVEAAEKRERILKEKVEGLRYEVDEWKAKYKQAKVEASVAQSALQKE 103
                 77888888888999999999999999999999999999999999999988877777777665 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.21
        ADIP  64 kleaeierlqskierlktqleqlerelalvqakerqlekklktleqkl 111
                  l+ ei+ l+ + + l+ +l + e e++  +++ r++  ++++le+k 
  KHJ33019.1  99 ALQKEITTLRDASRTLQLKLRDVEVENDDFERQARNTSSSMEDLESKY 146
                 345555555566666666677777777777777777777777766654 PP

  == domain 4  score: 8.7 bits;  conditional E-value: 0.0019
        ADIP  58 lnetirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekee 117
                 ++e+i+  e e e+l+ + +rl ++l+  + e+++ q k r+l+  l++++ ++++  ++
  KHJ33019.1 156 MEEEIKFSEQERENLRIENQRLRDELSNAKIEADVMQDKFRKLQSFLTATTITTNIHNDD 215
                 78999999**************************************99999998887765 PP

  == domain 5  score: 1.4 bits;  conditional E-value: 0.33
        ADIP  61 tirkleaeierlqskierlktqleqlerelalvqakerqlekklktleqklknekeelqrlknalqqi 128
                  ir+l+a ++rl+++++                                                 + 
  KHJ33019.1 341 HIRSLTAQMQRLEQRVQ-------------------------------------------------SA 359
                 33333333333333333.................................................22 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5  14.2    0.0098       8.8      73     179 ..      23     130 ..       6     135 .. 0.74
   2 ?    8.9  17.4    0.0018       1.6      82     178 ..      96     199 ..      83     200 .. 0.81
   3 ?    3.4   0.9     0.087        78      37      86 ..     308     359 ..     284     395 .. 0.58

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0098
       ATG16  73 sakiqsleqklaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvq....dlqDElsaLqlql 167
                 +++++  +++  q+ ++lae + s  +l+    el++ +++ e++ +  +e+++ l+ e+ + + k+k+ + e    + ++q    +l+D+  +Lql+l
  KHJ33019.1  23 EDSLAYYKSQYEQVEHDLAEFQASSHQLEI---ELEKDVEAAEKRERILKEKVEGLRYEVDEWKAKYKQAKVEASVAQSALQkeitTLRDASRTLQLKL 118
                 5667777889999999*****999999995...55566666666666666777777777777777777777776655555555555************* PP

       ATG16 168 nqaEeklrklek 179
                   +E ++++ e+
  KHJ33019.1 119 RDVEVENDDFER 130
                 ****99998876 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0018
       ATG16  82 klaqlreelaelyksrgelaqrllelneelqkleeklkedeerlaeleaeraa.......letklkdreeelrekeklvqdlqDElsaLqlqlnqaEek 173
                 + ++l++e ++l  +  +l+ +l++++ e ++ e+++++ ++++++le++ +        +e+++k  e+e + ++  +q l+DEls  ++++  + +k
  KHJ33019.1  96 AQSALQKEITTLRDASRTLQLKLRDVEVENDDFERQARNTSSSMEDLESKYNMaieravlMEEEIKFSEQERENLRIENQRLRDELSNAKIEADVMQDK 194
                 45789*******************************************97665111111245666777777777777899******************* PP

       ATG16 174 lrkle 178
                  rkl+
  KHJ33019.1 195 FRKLQ 199
                 ***98 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.087
       ATG16  37 enaklekaaasakssksskksakekeasasq..snskqsakiqsleqklaql 86 
                 +na+ ++a+ s+  +++sk++a++ + ++++  +  + +a++q leq++++ 
  KHJ33019.1 308 RNARTRSATPSVIRHTKSKAPATRGLPNSNSltHIRSLTAQMQRLEQRVQSA 359
                 3444433333333333334444444444444222222233333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1853  (0.103352); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        39  (0.00217525); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.92u 0.33s 00:00:01.25 Elapsed: 00:00:00.50
# Mc/sec: 2428.63
//
Query:       KHJ33020.1  [L=466]
Description: putative dna primase small subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.3e-64  215.5   0.1    7.6e-64  215.0   0.1    1.2  1  DNA_primase_S  DNA primase small subunit


Domain annotation for each model (and alignments):
>> DNA_primase_S  DNA primase small subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.0   0.1   4.2e-68   7.6e-64       1     176 [.     157     387 ..     157     388 .. 0.98

  Alignments for each domain:
  == domain 1  score: 215.0 bits;  conditional E-value: 4.2e-68
                    EEEEEETTT-.....TT--HHHHHHHHHHHHHHHHHHHH-----GGGEEEEE--SEEEEEEE--TTEEES-HHHHHHHHHH............... CS
  DNA_primase_S   1 FDiDmddydd....cseatvcekcwkfvsvavkvldellredfgfkdilwvfsgrrGfHcwvsdkdarpltdeeraaivnylnly........... 81 
                    FDiD++dydd    cs+ ++c+kcw+f++ a+kv+d +lredfgf++ilwv+sgrrG+H+wv+dk+ar+l+d +r+ai+ yl ++           
     KHJ33020.1 157 FDIDLTDYDDirtcCSKVSICQKCWQFITMAIKVIDVALREDFGFRHILWVYSGRRGAHAWVCDKRARNLNDQKRKAIAGYLMVIkggiqsgkrvd 252
                    9*******************************************************************************777777********** PP

                    ....................................HCHHHHCT--------............................................ CS
  DNA_primase_S  82 ..rplhpflsrsmlkivkpvveeiileeqdpf....eikkllrllpdkslre..kkkw.................................eaked 136
                      rplhp+++rs l+++k +++ +il++qdp+    +  +ll+llpd++l++   kkw                                 eak+d
     KHJ33020.1 253 lkRPLHPHVTRS-LNVLKAHFKVDILQDQDPWesdeKFGRLLELLPDQTLKNalLKKWssspgrtsvakwadidnlakagasknldatallEAKQD 347
                    ************.*****************************************9999************************************** PP

                    .........-----------------....---------. CS
  DNA_primase_S 137 ivlvllyprldeqvtkgikhllkapfcihgktgnvcvpld 176
                    ivl+++yprld++vtk+ +hllk+pf +h++tg+vcvp++
     KHJ33020.1 348 IVLEYTYPRLDIEVTKHLNHLLKSPFVVHPGTGRVCVPIN 387
                    **************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (466 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3354.20
//
Query:       KHJ33021.1  [L=422]
Description: putative 26s protease regulatory subunit 6b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-45  154.3   0.6    6.9e-45  152.7   0.0    2.1  2  AAA              ATPase family associated with various cellul
    2.8e-10   40.0   0.0    1.7e-09   37.5   0.0    2.1  2  Prot_ATP_ID_OB   Proteasomal ATPase OB C-terminal domain
    6.2e-09   36.0   0.1    2.2e-08   34.2   0.1    2.0  1  AAA_5            AAA domain (dynein-related subfamily)
    3.7e-08   33.7   0.0    9.9e-08   32.3   0.0    1.7  1  AAA_2            AAA domain (Cdc48 subfamily)
    1.6e-07   31.9   0.3    3.8e-05   24.2   0.0    2.8  3  AAA_16           AAA ATPase domain
    4.5e-06   26.0   0.2    8.9e-06   25.0   0.0    1.6  1  DUF815           Protein of unknown function (DUF815)
    3.7e-05   24.0   1.2     0.0088   16.3   0.1    2.7  2  AAA_22           AAA domain
    0.00024   20.9   0.0     0.0007   19.4   0.0    1.8  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    0.00049   20.6   0.0     0.0013   19.2   0.0    1.8  1  AAA_18           AAA domain
    0.00068   19.2   0.1     0.0026   17.3   0.1    1.9  1  AAA_7            P-loop containing dynein motor region
    0.00071   19.9   0.0     0.0016   18.7   0.0    1.6  1  AAA_28           AAA domain
     0.0012   18.9   0.1     0.0055   16.7   0.0    2.1  2  AAA_14           AAA domain
     0.0014   18.4   0.1     0.0034   17.2   0.1    1.7  1  AAA_lid_3        AAA+ lid domain
     0.0014   17.9   0.0     0.0028   16.9   0.0    1.5  1  TIP49            TIP49 P-loop domain
     0.0015   18.6   0.0      0.019   15.0   0.0    2.2  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
     0.0018   18.7   0.0      0.004   17.5   0.0    1.6  1  RNA_helicase     RNA helicase
     0.0043   17.0   0.0      0.015   15.2   0.0    1.9  2  NTPase_1         NTPase
      0.006   16.4   0.0      0.018   14.9   0.0    1.8  1  AAA_3            ATPase family associated with various cellul
     0.0062   16.3   0.1      0.014   15.1   0.1    1.6  1  AAA_30           AAA domain
     0.0075   15.7   0.0      0.018   14.5   0.0    1.6  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
     0.0085   16.0   0.1       0.11   12.3   0.0    2.5  2  NACHT            NACHT domain
     0.0092   16.1   0.0      0.019   15.1   0.0    1.6  1  AAA_33           AAA domain
     0.0096   15.3   0.0        0.5    9.7   0.0    2.3  2  TniB             Bacterial TniB protein
     0.0096   15.7   0.1      0.031   14.0   0.0    1.9  2  IstB_IS21        IstB-like ATP binding protein
  ------ inclusion threshold ------
      0.016   14.7   0.9      0.034   13.6   0.9    1.5  1  DegS             Sensor protein DegS
      0.021   14.5   0.2      0.057   13.1   0.2    1.8  1  AAA_24           AAA domain
      0.032   14.1   0.6       0.33   10.8   0.0    2.5  3  ATPase_2         ATPase domain predominantly from Archaea
      0.034   13.9   0.2       0.13   12.0   0.0    2.0  2  AAA_11           AAA domain
      0.038   13.8   0.0      0.081   12.8   0.0    1.5  1  Bac_DnaA         Bacterial dnaA  protein
      0.038   12.9   0.1       0.13   11.1   0.0    1.8  2  AFG1_ATPase      AFG1-like ATPase
      0.041   13.2   1.0       0.58    9.5   0.0    2.5  3  ATPase           KaiC
      0.048   13.4   0.2        1.3    8.7   0.0    2.8  3  Sigma54_activat  Sigma-54 interaction domain
      0.054   14.0   0.7        5.5    7.4   0.0    2.4  2  AAA_23           AAA domain
      0.086   12.1   0.0       0.22   10.8   0.0    1.6  1  Zeta_toxin       Zeta toxin
        0.1   12.2   1.3       0.27   10.8   0.1    2.1  2  AAA_25           AAA domain
        0.1   12.9   0.1       0.38   11.1   0.1    1.9  1  AAA_19           AAA domain
       0.15   11.6   0.0       0.32   10.6   0.0    1.5  1  cobW             CobW/HypB/UreG, nucleotide-binding domain
       0.17   11.7   0.0       0.33   10.7   0.0    1.4  1  AAA_29           P-loop containing region of AAA domain
       0.19   10.8   0.0       0.37    9.8   0.0    1.4  1  Parvo_NS1        Parvovirus non-structural protein NS1


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       7.1   3.3e+03      36      95 ..      59     122 ..      42     146 .. 0.56
   2 !  152.7   0.0   1.5e-47   6.9e-45       1     131 [.     203     335 ..     203     336 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 7.1
                 SSSTTHHHHHHHHHHHHHHHTS.....TSEEE..EEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHH CS
         AAA  36 skyvgesekkirelfkeakeka.....kpsil..fiDEidalaksrsgseseeeervvnqLlteldg 95 
                 ++y+++ ++++++ + +a+e+       p ++  f++ id+ ++     +s+ +++    +l+ ld+
  KHJ33021.1  59 EEYIKDEQRSLKKELVRAQEEIkriqsVPLVIgqFMEAIDQNTGIV---QSSTGSNYFVRILSTLDR 122
                 4556666666655555554444444333333333444444444444...444444444444444444 PP

  == domain 2  score: 152.7 bits;  conditional E-value: 1.5e-47
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH...TTCCCHHHHHHHHHHHHHHHHT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgv 96 
                 vllyGppGtGKT+l+kava+++ ++f+++ gse+++ky+ge+++ +r++f+ a+e++ p i+fiDEida+a++r   ++++++e +r++ +Ll+++dg+
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANSTTANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENS-PAIIFIDEIDAIATKRfdaQTGADREVQRILLELLNQMDGF 300
                 79******************************************************9.****************99888899999************** PP

                 TTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  97 kkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 ++  s+v vi+atnr d+ldpallr gR+drkie++
  KHJ33021.1 301 DQT-SNVKVIMATNRADTLDPALLRpGRLDRKIEFP 335
                 **6.77****************************98 PP

>> Prot_ATP_ID_OB  Proteasomal ATPase OB C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.5   0.0   3.7e-12   1.7e-09       1      57 []      90     145 ..      90     145 .. 0.97
   2 ?   -0.6   0.0         3   1.4e+03      27      41 ..     313     327 ..     304     328 .. 0.86

  Alignments for each domain:
  == domain 1  score: 37.5 bits;  conditional E-value: 3.7e-12
                     EEEEEEE-TTSSEEEEE-TTS-EEEEEE-GGGSSST--TTEEEEEETTTTEEEEEE- CS
  Prot_ATP_ID_OB   1 VatVsEvlddteraiVktssdeevvvslagavpremLrpgDlVavdkdtgfifEkLP 57 
                     +++  E +d  +  iV++s++ +++v++ + ++re+L+p+ +Va++++++  +++LP
      KHJ33021.1  90 IGQFMEAIDQ-NTGIVQSSTGSNYFVRILSTLDREKLKPSSSVALHRHSNSLVDILP 145
                     6889999999.********************************************99 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 3
                     EE-GGGSSST--TTE CS
  Prot_ATP_ID_OB  27 slagavpremLrpgD 41 
                     ++a+ ++++ Lrpg 
      KHJ33021.1 313 NRADTLDPALLRPGR 327
                     57899********96 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.1   4.8e-11   2.2e-08       1     136 [.     202     324 ..     202     325 .. 0.84

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 4.8e-11
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG--HHHHHHHHHHHHSSEEE.. CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEveraesevlnsLlslleerrllle 97 
                 +vlL GppGtgK++l++ +a  +++++  v ++++ ++    g+r +           + r ar  +++i+++DE++ + ++ +++      e ++ l 
  KHJ33021.1 202 GVLLYGPPGTGKTMLVKAVANSTTANFIRVVGSEFVQKYLGEGPRMV---------RDVFRMARenSPAIIFIDEIDAIATKRFDAQTGADREVQRILL 291
                 59*******************************98888877888887.........66666777679********************998777777777 PP

                 -SSSEEE---......-EEEEEESS--.-TT-TTHHHHT CS
       AAA_5  98 eggelvkaknddllerfrviatanpldrslnelspalrs 136
                 e+ ++++     +++++ vi+++n++d     l+pal++
  KHJ33021.1 292 ELLNQMDGFD--QTSNVKVIMATNRAD----TLDPALLR 324
                 7766665533..4567***********....88888875 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0   2.1e-10   9.9e-08       6     105 ..     203     296 ..     198     320 .. 0.81

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 2.1e-10
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS..EEEEETGGG-------------HHHHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpkessgadvSregVqrdLLqi 102
                 +ll gp g+Gkt+l ka+a+   +    ++ir+  se+ +    + l +     ++    a e+   i+++DEid i+ k+   +     +Vqr+LL +
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANSTTA----NFIRVVGSEFVQ----KYLGEGPRMVRDVFRMARENSpaIIFIDEIDAIATKRFDAQTGADREVQRILLEL 293
                 6899****************9985....************....88888777778877777777778************966666666689******** PP

                 HH- CS
       AAA_2 103 leg 105
                 l +
  KHJ33021.1 294 LNQ 296
                 975 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       6.3   2.9e+03      41      76 ..      90     117 ..      56     157 .. 0.63
   2 !   24.2   0.0   8.2e-08   3.8e-05      14      54 ..     190     230 ..     187     244 .. 0.78
   3 ?    4.5   0.1     0.091        42     128     159 ..     253     295 ..     245     309 .. 0.66

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 6.3
      AAA_16  41 vrellralekdggiflrgkcdqlesaipysalaqal 76 
                 + ++++a+ ++ gi+ + +   +        ++++l
  KHJ33021.1  90 IGQFMEAIDQNTGIVQSSTGSNY--------FVRIL 117
                 45566666666555555555555........33333 PP

  == domain 2  score: 24.2 bits;  conditional E-value: 8.2e-08
      AAA_16  14 salervrsgrpelvllsGesGvGKsslvrellralekdggi 54 
                 ++++++  + p+ vll+G++G+GK+ lv++++++ +++ + 
  KHJ33021.1 190 DLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTANFIR 230
                 56777777778*********************988877233 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.091
      AAA_16 128 allsrderplvlvlDdlq...........wadeaslql.laaLl 159
                 + +++  +p ++++D+++            ad + + + l++L 
  KHJ33021.1 253 RMARE-NSPAIIFIDEIDaiatkrfdaqtGADREVQRIlLELLN 295
                 44555.889*********88888666666566566666344333 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   1.9e-08   8.9e-06      51     116 ..     198     268 ..     149     317 .. 0.77

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 1.9e-08
      DUF815  51 lpannvLLwGarGtGKSslvkallneyaeegLrli..evekedlkelpklvellr...erperfilfvDDL 116
                  p + vLL+G  GtGK  lvka+ n+++++ +r++  e  ++ l e p++v+ +    +++   i+f+D +
  KHJ33021.1 198 DPPRGVLLYGPPGTGKTMLVKAVANSTTANFIRVVgsEFVQKYLGEGPRMVRDVFrmaRENSPAIIFIDEI 268
                 46778******************************77788999******999875232667789****976 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   1.9e-05    0.0088       8      29 ..     203     224 ..     198     241 .. 0.86
   2 ?    5.7   0.2     0.037        17      82     127 ..     248     310 ..     228     316 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.9e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleql 29 
                 ++++G++GtGKT+l++ ++++ 
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANST 224
                 689***************9986 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.037
      AAA_22  82 leqalrarav..ielliiDEaqhlr..s........eealeeLrsllnl.....srkgvqliL 127
                 +++ +r ++   ++++ iDE++ +   +         e+ + L +lln      ++++v++i+
  KHJ33021.1 248 VRDVFRMAREnsPAIIFIDEIDAIAtkRfdaqtgadREVQRILLELLNQmdgfdQTSNVKVIM 310
                 44555555556669*********9876155566777444444455555455578888888886 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   1.5e-06    0.0007      35      97 ..     202     272 ..     179     279 .. 0.71

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.5e-06
      RuvB_N  35 hvllyGpPGlGkttlakiiakelgvkl.kitsgPvlek.....agdlaalltnl..eekdvlfideihrls 97 
                  vllyGpPG Gkt l k +a+   +++ ++  +  ++k     ++ +  ++     ++  ++fidei  ++
  KHJ33021.1 202 GVLLYGPPGTGKTMLVKAVANSTTANFiRVVGSEFVQKylgegPRMVRDVFRMAreNSPAIIFIDEIDAIA 272
                 59********************9998626665566666322112223333322211334689999987765 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   2.9e-06    0.0013       1      85 [.     203     316 ..     203     344 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 2.9e-06
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf....................gvnlrdvakenglllevdpe.......aldeskrldedkldklldaleenss.a 70 
                 +ll G+pG+GKt l k++++++ ++                    ++ +  +a+en + + + +e        +d +  +d++++  ll++l++ +  +
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANSTtANfirvvgsefvqkylgegprmVRDVFRMARENSPAIIFIDEidaiatkRFDAQTGADREVQRILLELLNQMDGfD 301
                 799***************999875579999999999999999999999999999999999999999999998888888999999999999999988876 PP

      AAA_18  71 leegknlvidghlae 85 
                 ++++  +++   +a+
  KHJ33021.1 302 QTSNVKVIMATNRAD 316
                 677777677665555 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.1   5.7e-06    0.0026      34     121 ..     201     280 ..     192     296 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 5.7e-06
       AAA_7  34 kpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiiesklekrrkgvygPpggkklvvFvDDlnmpakekygaqp 121
                 + vll+Gp GtGKt+++k + ++           nf     ++ +q+ + +     r    ++  +   ++F+D+++  a  +++aq+
  KHJ33021.1 201 RGVLLYGPPGTGKTMLVKAVANSTT--------ANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQT 280
                 579***************9988776........7888888899999999888888887777888999999999999999999988885 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   3.4e-06    0.0016       2      44 ..     203     250 ..     202     288 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 3.4e-06
      AAA_28   2 ivitGgestGKTtlleaLaar....gypvv.pEaareileeklakged 44 
                 + + G+++tGKT l++a a+      ++vv  E++ ++l e+ +  +d
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANSttanFIRVVgSEFVQKYLGEGPRMVRD 250
                 6799***************65455478899999999998877654444 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       4.4     2e+03      42      42 ..      61      61 ..      36     116 .. 0.49
   2 !   16.7   0.0   1.2e-05    0.0055       5      85 ..     203     292 ..     200     318 .. 0.68

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 4.4
      AAA_14 42 r 42
                 
  KHJ33021.1 61 Y 61
                2 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 1.2e-05
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkklad.pekllelileklkeekktylflDEiqev............pewekalks 85 
                 +++ G+  +GKT+l+k ++++      +++ +   +  +k l + p ++ + ++++++e+   ++f+DEi  +            +e++++l +
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANSTT---ANFIRVVGSEFVQKYLGEgP-RMVRDVFRMARENSPAIIFIDEIDAIatkrfdaqtgadREVQRILLE 292
                 7899***************8888...77777766665544444314.3444555544556899*******999666666665555444444444 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.1   7.3e-06    0.0034       2      43 ..     360     401 ..     359     403 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 7.3e-06
   AAA_lid_3   2 vdlkeLAerTeGySGADlaalcreAallAlrrgikeitmedf 43 
                 vdl+ L  r +  SGA +aa+ +eA+l+A+r ++  i + d+
  KHJ33021.1 360 VDLDSLIVRNDPLSGAIIAAIMQEAGLRAVRKNRYNIIQVDI 401
                 6777777777778*******************9876555555 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   6.1e-06    0.0028       5      89 ..     149     237 ..     147     256 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 6.1e-06
                 XXXXXXXXXXXXXXXXXXXX.XXXXXX.XXXXXXXXXX...XXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49   5 hshikgLGldedgeaekeee.glvGqk.kareaagviv...elikekkla.GravLlaGpsgtGktalaiaiskelgedvpfvalsgsevy 89 
                  s i+ LG de+ ++++++  gl  qk + rea+ + +   +l k+  +   r+vLl Gp+gtGkt l  a++++ +    f+ ++gse+ 
  KHJ33021.1 149 DSSIAMLGQDEKPDVSYADVgGLDMQKqEIREAVELPLthfDLYKQIGIDpPRGVLLYGPPGTGKTMLVKAVANSTT--ANFIRVVGSEFV 237
                 57788899998887777664266555416799988754111566666553359********************9866..789999999975 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.73   3.4e+02      65      73 ..     183     193 ..     173     198 .. 0.75
   2 !   15.0   0.0   4.1e-05     0.019      21      79 ..     202     259 ..     190     276 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.73
                 S..EEEEE-TT CS
        TsaE  65 g..lyHfDlYR 73 
                 +  l HfDlY+
  KHJ33021.1 183 ElpLTHFDLYK 193
                 14599*****7 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 4.1e-05
                 EEEEEESTTSSHHHHHHHHHHHTT--..----TTTTSEEEEEE..SSEEEEE-TT-SSTHH CS
        TsaE  21 vilLeGdLGaGKTtlvrglakalgve..evkSPTFtlveeYelekeglyHfDlYRledeee 79 
                  +lL+G+ G+GKT+lv+++a++   +  +        v++Y  e    +  D++R+++e++
  KHJ33021.1 202 GVLLYGPPGTGKTMLVKAVANSTTANfiR--VVGSEFVQKYLGEGP-RMVRDVFRMARENS 259
                 499*******************9988554..444456888855433.44468888865554 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   8.8e-06     0.004       1      71 [.     203     265 ..     203     284 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 8.8e-06
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqevvvidDfgqvkdeenps.dla 71 
                   ++lyGp+g+GK++l+k +a         +++   ++r + ++f+++Y g+   ++ D+ ++  e++p  ++ 
    KHJ33021.1 203 VLLYGPPGTGKTMLVKAVA---------NSTTANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENSPAiIFI 265
                   689**************33.........333444569999********999999999999987755554444 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       8.4   3.9e+03      92     119 ..     157     183 ..     117     187 .. 0.69
   2 !   15.2   0.0   3.2e-05     0.015       2      92 ..     203     297 ..     202     309 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 8.4
                 HHHHH-EEEE---STTGGG-HHHHHHHH CS
    NTPase_1  92 alseadviviDEiGkmElkskkfkeave 119
                 +++++dv   D +G + ++ ++++eave
  KHJ33021.1 157 QDEKPDVSYAD-VGGLDMQKQEIREAVE 183
                 34667777666.8888888888888876 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 3.2e-05
                 EEEE--TTSSHHHHHHHHHHHH...GGGEEEE.EEEEE-------EEEEEET.T--EEEEEETT---SSEETTEEE-HHH...HHHHHHHHHHHH CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkssgvkvgGf.yteevreggrrigFkivdlasgeegiLarveakreprvgkyvvdves...feelalealrka 92 
                 v++ GppG+GKt lvk v++    + ++v G   ++++  +g r+  ++  +a ++   +   ++   +  +++  ++ +   ++++ le l+++
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANSTTANFIRVVGSeFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGAdreVQRILLELLNQM 297
                 6788*******************9999*99974688999**********9999988888877775555555555544432223666666666655 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   3.8e-05     0.018       2      30 ..     203     231 ..     202     239 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 3.8e-05
       AAA_3   2 vllegvPGlaktllvkalakaldlefkri 30 
                 vll g PG++kt+lvka+a++  ++f r+
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANSTTANFIRV 231
                 7999**********************998 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1     3e-05     0.014      20      51 ..     202     233 ..     190     278 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3e-05
      AAA_30  20 vavltGpAGtGKttalkalreaweaaggrvig 51 
                  ++l Gp+GtGKt+++ka+++  +a+  rv+g
  KHJ33021.1 202 GVLLYGPPGTGKTMLVKAVANSTTANFIRVVG 233
                 57899****************99998888876 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   3.8e-05     0.018      25      43 ..     203     221 ..     195     248 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.8e-05
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +ll+GppG+GKtml k+++
    KHJ33021.1 203 VLLYGPPGTGKTMLVKAVA 221
                   89************99875 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   0.00025      0.11       3      22 ..     203     222 ..     201     229 .. 0.88
   2 ?    0.6   0.0      0.99   4.5e+02      79     115 ..     258     296 ..     233     351 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00025
                 EEEEC-TTTCHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklal 22 
                 v+l G++G GKT+L++ +a 
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVAN 222
                 899*************9986 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.99
                 SCCCEEEEEE-STT-SS-TCH............HHHHHCT CS
       NACHT  79 lperlLlilDglDelvtdlgq...kekqpvrtlLselirk 115
                 +   + + +D +D ++t+         ++v++ L el+++
  KHJ33021.1 258 N-SPAIIFIDEIDAIATKRFDaqtGADREVQRILLELLNQ 296
                 3.33445568888887744335555566677777777765 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   4.2e-05     0.019       2      32 ..     203     235 ..     203     305 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 4.2e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllssdt 32 
                 vll G+pG+GK+ l++ +++ ++  ++++   +
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANSTTanFIRVVGSE 235
                 7899***************99996666665555 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0    0.0011       0.5      33      59 ..     198     224 ..     185     233 .. 0.81
   2 ?    3.1   0.0      0.12        56     107     140 ..     247     280 ..     237     298 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0011
        TniB  33 krmpnlllvGdsnnGKtmivekFarlh 59 
                 + ++ +ll+G++ +GKtm+v+  a++ 
  KHJ33021.1 198 DPPRGVLLYGPPGTGKTMLVKAVANST 224
                 556899**************9887765 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.12
        TniB 107 leqqvlrllrelkvrvLiiDEihnllagsarkqr 140
                 + ++v r+ re ++ ++ iDEi+ + + + ++q 
  KHJ33021.1 247 MVRDVFRMARENSPAIIFIDEIDAIATKRFDAQT 280
                 557788999999************9988877774 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       5.7   2.6e+03      79     112 ..      41      74 ..      31      78 .. 0.79
   2 !   14.0   0.0   6.8e-05     0.031      47      78 ..     200     231 ..     186     288 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 5.7
   IstB_IS21  79 lfvrvedLveelkrarrdgklaralkrllkvdll 112
                  ++++++L  +l+  + ++++ +  +r lk +l+
  KHJ33021.1  41 EYQTMKKLQGHLEYLQLQEEYIKDEQRSLKKELV 74 
                 5888999999999988888888888887777665 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 6.8e-05
   IstB_IS21  47 kenivllGpsGvGKshlaialgveavraglsv 78 
                   +++l Gp+G+GK+ l  a++ ++ ++ ++v
  KHJ33021.1 200 PRGVLLYGPPGTGKTMLVKAVANSTTANFIRV 231
                 56899****************99988777666 PP

>> DegS  Sensor protein DegS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.9   7.4e-05     0.034      77     141 ..      36     100 ..      32     110 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 7.4e-05
        DegS  77 eeikeaYeeakelqvelallrekEkqlrerRdelerrLkklketierAeklvsqvgvvlnyLsgd 141
                 ++  + Y++ k+lq +l +l+ +E+++++ + +l ++L +++e i+r +++   +g  ++ + ++
  KHJ33021.1  36 SDGADEYQTMKKLQGHLEYLQLQEEYIKDEQRSLKKELVRAQEEIKRIQSVPLVIGQFMEAIDQN 100
                 556688*****************************************999888877777766655 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   0.00012     0.057       5      22 ..     203     220 ..     200     280 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00012
      AAA_24   5 iliyGpsgiGKTtlakel 22 
                 +l+yGp+g+GKT+l+k  
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAV 220
                 79************9987 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       6.1   2.8e+03      96     103 ..      63      70 ..      19     117 .. 0.60
   2 ?   10.8   0.0   0.00072      0.33      23      45 ..     203     225 ..     191     243 .. 0.82
   3 ?    0.3   0.0       1.2   5.6e+02     116     149 ..     257     297 ..     243     317 .. 0.55

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 6.1
    ATPase_2  96 keksklvf 103
                 k++++ ++
  KHJ33021.1  63 KDEQRSLK 70 
                 22222222 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00072
    ATPase_2  23 yfiYGpegsGKtaLlkeiienle 45 
                 +++YGp g GKt L+k +++   
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANSTT 225
                 789*************9998764 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 1.2
    ATPase_2 116 kgkkiiiiiDelqklidlgln.......gaellvkeLlnli 149
                 +    ii+iDe+  +    ++       + +  + eLln +
  KHJ33021.1 257 ENSPAIIFIDEIDAIATKRFDaqtgadrEVQRILLELLNQM 297
                 22336777777777765455455554444444444444444 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1         2   9.2e+02     163     188 ..      55      80 ..      15     131 .. 0.63
   2 ?   12.0   0.0   0.00029      0.13      20      42 ..     203     225 ..     173     312 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 2
      AAA_11 163 leqerrklkkerkelskeleeaeesl 188
                 l+ +++ +k+e+++l+kel +a+e++
  KHJ33021.1  55 LQLQEEYIKDEQRSLKKELVRAQEEI 80 
                 23333333333333333333333333 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 0.00029
      AAA_11  20 tliqGPPGtgKTktivellsqll 42 
                 +l+ GPPGtgKT  + ++ ++ +
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANSTT 225
                 699*********99988888774 PP

>> Bac_DnaA  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   0.00018     0.081      37     112 ..     203     274 ..     197     317 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00018
                 EEEE-SSSSSHHHHHHHHHHHHHHHSSSS-EEEEEHHHHHHHHHHHHHTT-HHHHHHHHT.T-SEEEEE-GGGGTT- CS
    Bac_DnaA  37 lfiygevGlGktHLlkaignevlenapelrvvYltaeeFlnelvkalrdkkaeefkeklr.kvDvLliDDiqflagk 112
                 +++yg+ G Gkt L+ka++n +++n+   rv    + eF+++ +        + f+     +  ++ iD+i  +a+k
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANSTTANFI--RV---VGSEFVQKYLGEGPRMVRDVFRMAREnSPAIIFIDEIDAIATK 274
                 79******************9988763..33...4566777766665555555565544413345567777776666 PP

>> AFG1_ATPase  AFG1-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.6   7.4e+02     192     240 ..      30      79 ..      25      87 .. 0.70
   2 ?   11.1   0.0   0.00028      0.13      58      83 ..     196     221 ..     162     269 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.6
  AFG1_ATPase 192 hlevlevdggvDYRlrklrqaev.ylapldeaaeaaldklfkeltsgepe 240
                  +levle dg+  Y + k  q ++ yl  ++e+ +++  +l kel+++++e
   KHJ33021.1  30 ALEVLESDGADEYQTMKKLQGHLeYLQLQEEYIKDEQRSLKKELVRAQEE 79 
                  57899999999998765555444277777777777777777788877655 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00028
  AFG1_ATPase  58 svepvrglYlwGgvGrGKtylmdlff 83 
                     p+rg+ l+G+ G GKt+l+    
   KHJ33021.1 196 GIDPPRGVLLYGPPGTGKTMLVKAVA 221
                  5689*****************98765 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1         8   3.7e+03     101     119 ..      63      81 ..      46     105 .. 0.55
   2 ?    9.5   0.0    0.0013      0.58       9      37 ..     190     218 ..     183     227 .. 0.83
   3 ?    1.6   0.0      0.32   1.5e+02     114     158 ..     254     304 ..     238     315 .. 0.70

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 8
      ATPase 101 kedleelieelaeaikeik 119
                 k++ ++l++el +a +eik
  KHJ33021.1  63 KDEQRSLKKELVRAQEEIK 81 
                 3333344444433333333 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0013
      ATPase   9 DeilkgGipegrvvlitGepGtGKtifal 37 
                 D   + Gi   r vl++G pGtGKt++++
  KHJ33021.1 190 DLYKQIGIDPPRGVLLYGPPGTGKTMLVK 218
                 5555668888899*************976 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.32
      ATPase 114 aikeikakrvviDsitgl.a.....yeekeavaReilrqlvrvlkklgvTa 158
                 + +e     + iD i+++ +     ++  + ++ +il +l++++ + ++T+
  KHJ33021.1 254 MARENSPAIIFIDEIDAIaTkrfdaQTGADREVQRILLELLNQMDGFDQTS 304
                 556666677788888887331111133445567889999999999999986 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0         7   3.2e+03      76      99 ..      91     114 ..      88     123 .. 0.82
   2 ?    8.7   0.0    0.0029       1.3      23      47 ..     201     225 ..     187     241 .. 0.80
   3 ?    0.8   0.1      0.75   3.5e+02      96     143 ..     262     314 ..     254     321 .. 0.60

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 7
                      SSSTTTSS-BEHHHHHTTTSEEEE CS
  Sigma54_activat  76 GaFtGAekekkGlfekadgGtlfL 99 
                      G F  A ++++G ++++ g+  f+
       KHJ33021.1  91 GQFMEAIDQNTGIVQSSTGSNYFV 114
                      889999999999999999887775 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0029
                      S-EEEECSTTSSHHHHHHHHHHHST CS
  Sigma54_activat  23 lsvlitGesGtGKellaraiheask 47 
                        vl+ G  GtGK++l +a+ ++++
       KHJ33021.1 201 RGVLLYGPPGTGKTMLVKAVANSTT 225
                      579***************9987554 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.75
                      EEEEETGGGS-HH...HHHHHHHHHHHSEEESBTSSS..EEE--EEEEEEESS CS
  Sigma54_activat  96 tlfLDeigelple...lQekLlrvlqegevervGssk..eikvdvriiaatne 143
                      ++f+Dei  + ++   +Q+   r +q+  +e + + +   ++ +v++i+atn+
       KHJ33021.1 262 IIFIDEIDAIATKrfdAQTGADREVQRILLELLNQMDgfDQTSNVKVIMATNR 314
                      67777776665431114555555555555555544432246778888988886 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   1.3      0.17        78     144     185 ..      41      83 ..      12      97 .. 0.53
   2 ?    7.4   0.0     0.012       5.5      15      44 ..     197     225 ..     184     343 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.17
      AAA_23 144 eefelkdkkerleelekeleeledekkllekle.qekekekel 185
                 e++  k+ +  le l+ + e ++de++ l+k++ +++e+ k++
  KHJ33021.1  41 EYQTMKKLQGHLEYLQLQEEYIKDEQRSLKKELvRAQEEIKRI 83 
                 2223333334555555555555556666666532444444444 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.012
      AAA_23  15 idFskgltlItGpNGaGKTTildAiklaLy 44 
                 id  +g+ l++Gp G+GKT ++ A+   ++
  KHJ33021.1 197 IDPPRGV-LLYGPPGTGKTMLVKAVANSTT 225
                 5555555.9*************99876665 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00047      0.22      16      53 ..     200     235 ..     192     240 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00047
  Zeta_toxin  16 PklillgGqpGAGKselaellkdelerqgnvvrldpDd 53 
                 P  +ll G pG GK+ l +++++++  + n++r+ + +
  KHJ33021.1 200 PRGVLLYGPPGTGKTMLVKAVANST--TANFIRVVGSE 235
                 77899*******************9..99999998765 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   0.00059      0.27      36      56 ..     203     223 ..     200     238 .. 0.86
   2 ?   -1.3   0.0       3.1   1.4e+03     130     163 ..     248     280 ..     229     310 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00059
      AAA_25  36 allaGapgtGKttlaldlala 56 
                 +ll+G+pgtGKt+l+  +a +
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANS 223
                 69************9877765 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 3.1
      AAA_25 130 vdaleaaieevegvrlvviDplsralggdensns 163
                 v+++ + ++e + ++ + iD ++++     ++++
  KHJ33021.1 248 VRDVFRMARE-NSPAIIFIDEIDAIATKRFDAQT 280
                 5566677777.67999999998886665333333 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   0.00082      0.38      12      33 ..     202     223 ..     197     231 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00082
      AAA_19  12 vllvtaGpGtGKTrvlkhival 33 
                  +l+ ++pGtGKT ++k++ + 
  KHJ33021.1 202 GVLLYGPPGTGKTMLVKAVANS 223
                 5899**********99988765 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0    0.0007      0.32       4      37 ..     204     237 ..     202     256 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.0007
                 EEEESTTCCHHHHHHHHHCT--SS-EEEEESS-S CS
        cobW   4 vltGflGsGKTtLlnhllenraglklavivNefg 37 
                 +l G++G+GKT+L++++ + +  + + v+  ef 
  KHJ33021.1 204 LLYGPPGTGKTMLVKAVANSTTANFIRVVGSEFV 237
                 688***************9999999999988886 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00072      0.33      12      43 ..     189     221 ..     187     228 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00072
      AAA_29  12 fdg.htieidlkgatlltGpsGsGKSTllDAiq 43 
                 fd  ++i id+   +ll Gp G+GK+ l+ A++
  KHJ33021.1 189 FDLyKQIGIDPPRGVLLYGPPGTGKTMLVKAVA 221
                 55556777887667**************99986 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00082      0.37     117     138 ..     203     224 ..     198     232 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00082
   Parvo_NS1 117 vwfyGpantGktnlaeaIakav 138
                 v++yGp+ tGkt+l +a a+ +
  KHJ33021.1 203 VLLYGPPGTGKTMLVKAVANST 224
                 89****************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1069  (0.0596241); expected 358.6 (0.02)
Passed bias filter:                      791  (0.0441185); expected 358.6 (0.02)
Passed Vit filter:                       136  (0.00758548); expected 17.9 (0.001)
Passed Fwd filter:                        39  (0.00217525); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              39  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 2949.82
//
Query:       KHJ33022.1  [L=453]
Description: putative atp dependent rna helicase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-43  145.9   0.0    1.4e-42  145.4   0.0    1.2  1  DEAD        DEAD/DEAH box helicase
      1e-28   99.9   1.3    1.1e-27   96.6   0.4    2.6  3  Helicase_C  Helicase conserved C-terminal domain
    0.00053   20.0   0.0     0.0012   18.9   0.0    1.6  1  ResIII      Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.4   0.0   2.3e-46   1.4e-42       2     174 ..      73     236 ..      72     238 .. 0.95

  Alignments for each domain:
  == domain 1  score: 145.4 bits;  conditional E-value: 2.3e-46
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdi 100
                 +iQ+eaip +l+g+d+l++a+ G+GKT+af+ip+lq++    ++++ +ali++PtreLa qt + +k+++++++++v++++gg+  rd++ +l+  v++
  KHJ33022.1  73 PIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALQNIN--PKSSKIQALILVPTRELAMQTSQVCKTLGNNLGINVMVTTGGTLLRDDIVRLSDPVHV 169
                 8*************************************5..699*************************************************777*** PP

                 EEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 101 vvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvk 174
                 vvgtpgr++dl ++g  +ls++ ++++DEad+ll+ +f + i+++l+         +++rqv+++SAT+p +vk
  KHJ33022.1 170 VVGTPGRILDLARKGVADLSECPTFIMDEADKLLSPEFTPVIKQLLQFH-------PKNRQVLLFSATFPITVK 236
                 ************99******************************88777.......67899********98877 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.11   6.7e+02      13      49 ..     113     153 ..     103     163 .. 0.72
   2 ?   -2.1   0.0      0.81   4.8e+03       6      27 ..     211     232 ..     208     252 .. 0.71
   3 !   96.6   0.4   1.8e-31   1.1e-27       3     111 .]     273     380 ..     271     380 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.11
                 TTTTSEEEEEESSHH..HHHH....HHHHHHHTTSTEEEESTT CS
  Helicase_C  13 eeeggkilifvntid..rlek....vklllekkgikvavlhge 49 
                 ++++ ++li v+t++  +  +    +k l ++ gi+v v +g 
  KHJ33022.1 113 KSSKIQALILVPTRElaM--QtsqvCKTLGNNLGINVMVTTGG 153
                 566778999****99641..23456777766669999988875 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.81
                 HHHHHHHTTTTSEEEEEESSHH CS
  Helicase_C   6 llellkleeeggkilifvntid 27 
                 +++ll+++ +++++l+f+ t  
  KHJ33022.1 211 IKQLLQFHPKNRQVLLFSATFP 232
                 5566777888899999988765 PP

  == domain 3  score: 96.6 bits;  conditional E-value: 1.8e-31
                 HHHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHT...TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHH CS
  Helicase_C   3 leallellkleeeggkilifvntidrlekvklllekk...gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvt 98 
                 +++l  l+ ++ + ++++if+n+++r+   +ll +k    g+++ + h+++ qn+r++++++f++g ++ L+++d + rGidi+ vn+Vinfd+p+n +
  KHJ33022.1 273 VHCLNTLF-SKLQINQSIIFCNSTNRV---ELLAKKItelGYSCFYSHARMLQNNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAE 367
                 55555555.88999*************...55544445579********************************************************** PP

                 HHHHHHTTSSSTT CS
  Helicase_C  99 syiqriGRtgRag 111
                 +y +riGR gR+g
  KHJ33022.1 368 TYLHRIGRSGRFG 380
                 ***********86 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0     2e-07    0.0012      26     170 ..      87     232 ..      69     233 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 2e-07
                 EEEEEESTTSTHHHHH.HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG........GEEEESSS-B--.......-SEEEEEHHHHHHTH. CS
      ResIII  26 rglikmaTGtGKTlva.aklierllkkgkeekflflvprkslleqtleefkkflseayke....igkkvsgdkkkakekdstnkkilvttiqsldadse 119
                  +l  +  GtGKT    + + +++  k ++ ++l+lvp+++l  qt +  k + ++   +    +g+ +  d      + s+  +++v t  ++     
  KHJ33022.1  87 DILARAKNGTGKTAAFvIPALQNINPKSSKIQALILVPTRELAMQTSQVCKTLGNNLGINvmvtTGGTLLRDD---IVRLSDPVHVVVGTPGRILDLA- 181
                 56777889*****998788888888888888****************98888887765444434222222222...2457999********9999888. PP

                 .......HHHTTT-SEEEEETGGGTTS.TTTHHHHHT-.....--SEEEEEESS-S CS
      ResIII 120 eeeeeseellrdrfdviiiDEaHrlgakkswreilekf.....keavllglTATpe 170
                      +  ++ ++ + +i+DEa +l +  +++ +++++     k+  +l ++AT++
  KHJ33022.1 182 ----RKGVADLSECPTFIMDEADKLLS-PEFTPVIKQLlqfhpKNRQVLLFSATFP 232
                 ....78889999999************.54444433332334566888999**986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       383  (0.021362); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.21s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 3599.96
//
Query:       KHJ33023.1  [L=504]
Description: putative f-box domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (504 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       323  (0.0180155); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.37
# Mc/sec: 4048.71
//
Query:       KHJ33024.1  [L=274]
Description: putative family a g protein-coupled receptor-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-50  171.8  18.1      2e-50  171.4  18.1    1.0  1  Bac_rhodopsin   Bacteriorhodopsin-like protein
  ------ inclusion threshold ------
       0.82    9.3   8.6        3.3    7.3   0.2    2.2  2  SUR7            SUR7/PalI family
       0.94    9.7  12.8        2.5    8.3   1.5    2.3  2  DUF3792         Protein of unknown function (DUF3792)
        3.3    8.0  12.0        1.1    9.6   1.3    2.8  2  DUF4064         Protein of unknown function (DUF4064)
        4.4    8.0   9.3        1.3    9.7   2.5    2.6  2  Nucleos_tra2_N  Na+ dependent nucleoside transporter N-termin
          7    6.4  10.7       0.31   10.8   0.7    2.6  3  TMEM208_SND2    SRP-independent targeting protein 2/TMEM208


Domain annotation for each model (and alignments):
>> Bac_rhodopsin  Bacteriorhodopsin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.4  18.1   6.7e-54     2e-50       4     219 ..      32     250 ..      30     253 .. 0.96

  Alignments for each domain:
  == domain 1  score: 171.4 bits;  conditional E-value: 6.7e-54
                    HHHHHHHHHHHHHHHHHHTTTSSTCCHHHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEETTEE...EEEETHHHHHHHHHHHHHHHHHHHHTTSSH CS
  Bac_rhodopsin   4 fsvfallalvatllfvvtsrrvkdgekrkllvipllitaiaavaYltmalglGltgveaefeh...rqvfyarYidWllttPllvlvlaelagadr 96 
                    ++v  ++++++ + f++ s rv + +kr + v +++it +aav+Y++ma+g G+t v+a       rqvf+arY+dW++ttPll+l+la lag d 
     KHJ33024.1  32 LWVVFVIMILSSISFAFLSLRV-PVQKRLFHVLTTFITLFAAVSYFAMASGDGYTYVAASTPLtsyRQVFWARYADWVVTTPLLLLDLAFLAGLDG 126
                    89*******************7.7788*****************************9995444999****************************** PP

                    HHHHHHHHHHHHHHHHHHHHHHT.SHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTSSCHH CS
  Bac_rhodopsin  97 rtllvlvladvvmivgglvgali.estyrwvyftisvaallvvlylllgelaraakslsserrslfntLrnlvvvlwilYpvawllgeeGngiqpd 191
                     ++++ ++ad++mi+ gl +a++ +  ++w+y+++s++a+lv++y l  + +ra+++ ++++++lf ++  ++++lw+lYp++w++g++  +  +d
     KHJ33024.1 127 ASIVISLVADILMILLGLFAAFShNENQKWGYYAFSCFAYLVIVYQLAIPGRRAVSNKQNSTANLFAAIGGFTLILWTLYPIVWGIGDGARKWSVD 222
                    ***********************88889**************************************************************9***** PP

                    HHHHHHHHHHHHHHHHHHHHHHCCHTTC CS
  Bac_rhodopsin 192 veavvygilDlvtkvgfglillaaatsl 219
                    +e v y ilD+++k +fg+ ll a++ +
     KHJ33024.1 223 SEIVAYAILDVLAKPVFGFWLLLAHDRN 250
                    **********************999877 PP

>> SUR7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   3.6    0.0075        22     114     176 ..      31      89 ..      19     111 .. 0.71
   2 ?    7.3   0.2    0.0011       3.3     119     158 ..     129     168 ..     125     177 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0075
        SUR7 114 alfilhiialvlsfislvvgllaicvspdnsrllsflnlllsvlsflatllaalldtllfvfv 176
                  l+++++i ++ls is+ +  l +   p ++rl+ +l+++++++++++ +++a  d  ++v +
  KHJ33024.1  31 TLWVVFVI-MILSSISFAFLSLRV---PVQKRLFHVLTTFITLFAAVSYFAMASGDGYTYVAA 89 
                 44555554.455666665555555...578888888888999999988888888887777744 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0011
        SUR7 119 hiialvlsfislvvgllaicvspdnsrl....lsflnlllsvls 158
                 ++i+lv+ ++++++gl+a +++++n ++    +s+++     l+
  KHJ33024.1 129 IVISLVADILMILLGLFAAFSHNENQKWgyyaFSCFA----YLV 168
                 799*****************89999998444444443....333 PP

>> DUF3792  Protein of unknown function (DUF3792)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   1.5   0.00084       2.5      39      85 ..      33      79 ..      21      94 .. 0.65
   2 ?    6.3   4.1    0.0034        10      22     107 ..     117     196 ..     107     203 .. 0.59

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00084
     DUF3792 39 ililiililsvfigGflagkkakkkgllnGllvGllyflillllsll 85
                +++++i+ils++  +fl+ +   +k+l++ l + + +f+ +  ++++
  KHJ33024.1 33 WVVFVIMILSSISFAFLSLRVPVQKRLFHVLTTFITLFAAVSYFAMA 79
                66666667766666777766666666666666666666664444433 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0034
     DUF3792  22 ilalllyftslsekvlsililiililsvfigGflagkkakkkgllnGllvGllyflillllsllikksgsafslklliklllllla 107
                  la+l     l+ +++ +++l+  il++++g f a  +++++++ + ++ +++y +i++ l++ +    ++++ ++ ++ l+++++
  KHJ33024.1 117 DLAFL---AGLDGASI-VISLVADILMILLGLFAAFSHNENQKWGYYAFSCFAYLVIVYQLAIPG--RRAVSNKQNSTANLFAAIG 196
                 45555...34444444.455566666666776777778888888888899999999977666655..3344444444333333333 PP

>> DUF4064  Protein of unknown function (DUF4064)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   3.4     0.059   1.8e+02      56     101 ..      27      76 ..       6      78 .. 0.81
   2 ?    9.6   1.3   0.00036       1.1      10      73 ..     130     209 ..     126     213 .. 0.67

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.059
     DUF4064  56 flstllivlgvialiaivlgivgalllkknkk....vsGilfiiaailsl 101
                   s +l+v +vi +++++ + + +l +  +k+    +  ++ ++aa+ ++
  KHJ33024.1  27 LGSRTLWVVFVIMILSSISFAFLSLRVPVQKRlfhvLTTFITLFAAVSYF 76 
                 5678999***********99999999999999888666777777776655 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00036
     DUF4064  10 lIGgilgillglllllflfllssgefsqeltee................qalsgedasavleflstllivlgvialiaiv 73 
                 +I+ +  il++ll+l+++f ++++++   + ++                 a+s + +s++  f    +++l+++ l  iv
  KHJ33024.1 130 VISLVADILMILLGLFAAFSHNENQKWGYYAFScfaylvivyqlaipgrRAVSNKQNSTANLFAAIGGFTLILWTLYPIV 209
                 68888888888899999888999888888888888888888888777764444444444444444444445555555555 PP

>> Nucleos_tra2_N  Na+ dependent nucleoside transporter N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   2.5   0.00044       1.3      22      62 ..      33      73 ..      29      79 .. 0.88
   2 ?    1.7   0.6      0.14   4.1e+02      10      56 ..     119     168 ..     113     174 .. 0.58

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00044
                    HHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH CS
  Nucleos_tra2_N 22 wrtVigglllQfvlAlfvlktpagrdvfkalsdlvqalldf 62
                    w + ++++l  + +A++ l++p+ + +f++l ++++ + ++
      KHJ33024.1 33 WVVFVIMILSSISFAFLSLRVPVQKRLFHVLTTFITLFAAV 73
                    6667899999************************9998766 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.14
                     HHHT-S-GGG--HHHHHHHHHHHH.HHHHHHHT..SHHHHHHHHHHHHHH CS
  Nucleos_tra2_N  10 awllSenrkainwrtVigglllQf.vlAlfvlk..tpagrdvfkalsdlv 56 
                     a+l   +  +i +++V+  l++ + ++A+f  +   ++g+ +f++++ lv
      KHJ33024.1 119 AFLAGLDGASIVISLVADILMILLgLFAAFSHNenQKWGYYAFSCFAYLV 168
                     55555566666666666333333314455544455778888888887766 PP

>> TMEM208_SND2  SRP-independent targeting protein 2/TMEM208
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   1.5     0.091   2.7e+02     102     135 ..      33      68 ..      27      96 .. 0.51
   2 ?   10.8   0.7    0.0001      0.31      23      74 ..     131     183 ..     127     212 .. 0.88
   3 ?   -2.7   0.0       1.5   4.4e+03      61     126 ..     228     240 ..     220     247 .. 0.53

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.091
  TMEM208_SND2 102 wivqvlsilfgnkfWllylviPa..yalYklwglil 135
                   w+v v++il++  f +l l +P+  ++++ l ++i 
    KHJ33024.1  33 WVVFVIMILSSISFAFLSLRVPVqkRLFHVLTTFIT 68 
                   444444444444444444444442122333333322 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.0001
  TMEM208_SND2  23 islavnalylllrlll.rsslrprslllylllslpalllyyvlekmgrpkyde 74 
                   isl++ +l++ll l+   s +  +++  y+++ +++l+++y+l+  gr  +++
    KHJ33024.1 131 ISLVADILMILLGLFAaFSHNENQKWGYYAFSCFAYLVIVYQLAIPGRRAVSN 183
                   889999999999999999999999*******************9999887774 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1.5
  TMEM208_SND2  61 yyvlekmgrpkydedgelvdsGeDLsegGlteymfDviyltwivqvlsilfgnkfWllylviPaya 126
                   y +l+ +++p                                                     +++
    KHJ33024.1 228 YAILDVLAKP-----------------------------------------------------VFG 240
                   4444444444.....................................................444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1962.78
//
Query:       KHJ33025.1  [L=330]
Description: hypothetical protein EV44_g3407 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.2e-05   23.1   2.2      9e-05   22.1   2.2    1.5  1  zf-CCHC_5  GAG-polyprotein viral zinc-finger
    7.7e-05   22.6   8.0    0.00017   21.5   8.0    1.6  1  zf-CCHC    Zinc knuckle
      0.008   16.1   4.6      0.015   15.2   4.6    1.5  1  zf-CCHC_3  Zinc knuckle
  ------ inclusion threshold ------
      0.044   13.7   0.1      0.092   12.7   0.1    1.5  1  CLIP1_ZNF  CLIP1 zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   2.2     2e-08     9e-05       3      20 ..     216     233 ..     214     238 .. 0.91

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 2e-08
                 -B-TTT-SSBS-TTT--- CS
   zf-CCHC_5   3 glCpRCkkgkHwardChs 20 
                 + C +C+k  Hwa+dCh 
  KHJ33025.1 216 NHCFKCGKYGHWANDCHT 233
                 78**************96 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   8.0   3.8e-08   0.00017       2      16 ..     217     231 ..     216     232 .. 0.95

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 3.8e-08
                 CTSSSSSSSSTTTTS CS
     zf-CCHC   2 kCynCGepGHiardC 16 
                  C++CG+ GH+a+dC
  KHJ33025.1 217 HCFKCGKYGHWANDC 231
                 7************** PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   4.6   3.4e-06     0.015       2      26 ..     213     237 ..     212     257 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 3.4e-06
   zf-CCHC_3   2 nasaaCQkClkkGHwtYECknager 26 
                 n +  C kC+k+GHw+  C  ++++
  KHJ33025.1 213 NNNNHCFKCGKYGHWANDCHTNQSN 237
                 67889**************974433 PP

>> CLIP1_ZNF  CLIP1 zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1     2e-05     0.092       7      17 .]     221     231 ..     220     231 .. 0.98

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2e-05
   CLIP1_ZNF   7 CEvFGHdTedC 17 
                 C+ +GH+++dC
  KHJ33025.1 221 CGKYGHWANDC 231
                 *********** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1030  (0.0574488); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2537.00
//
Query:       KHJ33026.1  [L=385]
Description: putative act-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-15   55.3   0.3    7.3e-10   38.5   0.0    2.8  2  ACT_7     ACT domain


Domain annotation for each model (and alignments):
>> ACT_7  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.0   4.1e-14   7.3e-10       5      63 ..     100     156 ..      97     158 .. 0.93
   2 !   13.8   0.1   2.1e-06     0.037       3      63 ..     305     379 ..     303     380 .. 0.91

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 4.1e-14
                 EEEEEEE-S-.---SS--HHHHHHHHHHTTT---EEEE-SS-EEEEEEGGGHHHHHHHH CS
       ACT_7   5 gwiklsvvgsglpfdvtGivaklaspLaeagIsifqiStyrtdyiLVpeedlekAveaL 63 
                  + ++s++ +++  d+  +v  l++pLa agI+if+i+t +td++LV + d  ++v++L
  KHJ33026.1 100 AYTAFSMSTTNM--DAGQRVIDLTAPLAIAGIPIFFITTCYTDFFLVCSTDRSAVVSTL 156
                 567889999999..99*****************************************99 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 2.1e-06
                 EEEEEEEEE-S-.---SS--HHHHHHHHH..............HTTT---EEEE-SS-EEEEEEGGGHHHHHHHH CS
       ACT_7   3 edgwiklsvvgsglpfdvtGivaklaspL..............aeagIsifqiStyrtdyiLVpeedlekAveaL 63 
                 e + +++ ++ s lp+++tGiv ++as L                +  ++ ++St+r ++++  ee+  +A+ aL
  KHJ33026.1 305 ETTLVPIFLDLSTLPVEITGIVCGVASLLvqelcdisdkagekECELTELSYLSTARAGSVMLSEEQSRTALGAL 379
                 5667788888999**************************999888899999********************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       352  (0.019633); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2805.97
//
Query:       KHJ33027.1  [L=179]
Description: hypothetical protein EV44_g3295 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.013   15.6   0.0      0.022   14.9   0.0    1.4  1  Speriolin_C  Speriolin C-terminus


Domain annotation for each model (and alignments):
>> Speriolin_C  Speriolin C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   1.3e-06     0.022      61     116 ..      57     113 ..      49     136 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.3e-06
  Speriolin_C  61 eslmerLkklgynkkvHpel.veklvntyGiLkerpeakasekeayeepklLrklvl 116
                   ++ ++Lk  gy  + Hp+  + +++ +yG  ++++ + + e ++ e++++L+k+  
   KHJ33027.1  57 VEIAKSLKAGGYCWDFHPATrSPEIISKYGNTNKNATNLMLECYTTEKLNYLKKIKR 113
                  68999*************863679**************999999999*****99755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1432.34
//
Query:       KHJ33028.1  [L=161]
Description: putative duf1772 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-28  100.0   0.1    1.6e-28   99.7   0.1    1.1  1  DUF1772   Domain of unknown function (DUF1772)


Domain annotation for each model (and alignments):
>> DUF1772  Domain of unknown function (DUF1772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.7   0.1   8.8e-33   1.6e-28       1     136 [.      24     155 ..      24     156 .. 0.93

  Alignments for each domain:
  == domain 1  score: 99.7 bits;  conditional E-value: 8.8e-33
     DUF1772   1 GlilafslfvvPallslpassslllkqwrrlfkrgkavfpplallsalafaylaaraasrgarllylaaaallllsivpyTllvmvPtNnkLaalkeed 99 
                 G ++ +s fv Pa++++p+++  ll+qw+ +++ g+ + pplalls++a+ay++   +s++  +l+ a+a+++++si+pyT++v+ PtN+ L+++  + 
  KHJ33028.1  24 GSSTGISRFVLPAIRQSPTPI--LLSQWKGTYNLGSITSPPLALLSSSAMAYVSYYFRSSADGKLW-ALASAFAISIIPYTFIVVFPTNKFLEEWH-SI 118
                 677889***************..*****************************999999999*****.779999****************999*995.55 PP

     DUF1772 100 akekedeaevrellerWgrlnlvRavlalaaavlgll 136
                 + ++++ ++v + +++W+  + +R++l+la+++l+l+
  KHJ33028.1 119 EGQGVERKDVDDKINEWAYKHSARTCLTLAGGLLALF 155
                 5677889999999*********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       466  (0.0259914); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1194.51
//
Query:       KHJ33029.1  [L=465]
Description: putative vacuolar protein sorting-associated protein 62 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-08   33.2   2.2    4.7e-07   28.5   1.3    2.1  2  Vps62     Vacuolar protein sorting-associated protein 62


Domain annotation for each model (and alignments):
>> Vps62  Vacuolar protein sorting-associated protein 62
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.4   0.0     0.001        19     237     269 ..     113     145 ..      83     176 .. 0.85
   2 !   28.5   1.3   2.6e-11   4.7e-07     365     430 ..     253     314 ..     250     317 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.001
       Vps62 237 eqikalikaygptvyfhpdeeylpssvsWffkn 269
                 + i++ + +y+p+v++  +e+++ps +s +++n
  KHJ33029.1 113 TTISSYVLTYAPIVVLDRKETFFPSDLSTHIAN 145
                 457888999****************99988877 PP

  == domain 2  score: 28.5 bits;  conditional E-value: 2.6e-11
       Vps62 365 kiGehvgdWehvtlrisnfsgeLlsvyfsqhsgGewvdasdlefieggnkavvyssknghasypkp 430
                 ++G+h+gdWeh  +r +n  g  +++++sqh  G+      ++ i  g ++vv+s++ +h+ +p++
  KHJ33029.1 253 QVGNHIGDWEHNMIRFTN--GTPTAIWYSQHGYGSAYTYDAVQKI--GVRPVVFSARGSHSNWPEA 314
                 79*************998..7789**********98777766655..58*************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (465 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.22s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3482.86
//
Query:       KHJ33030.1  [L=378]
Description: putative integral membrane protein duf92 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.3e-84  280.9   1.0    9.3e-84  280.5   1.0    1.1  1  DUF92     Integral membrane protein DUF92


Domain annotation for each model (and alignments):
>> DUF92  Integral membrane protein DUF92
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  280.5   1.0   5.2e-88   9.3e-84       2     236 .]       9     361 ..       8     361 .. 0.97

  Alignments for each domain:
  == domain 1  score: 280.5 bits;  conditional E-value: 5.2e-88
       DUF92   2 ltlllalralrkksLtpsGalaavlvgvlialaplgllffllllvFfllgslltkvkkkvKakleeekega......RdavqVlanslvalllally.. 92 
                 +tl++++ra+++ +Lt +G++aa+l++ ++a++p++ l+f ll++Ffl+g+++tk+k++ K+kl+ +++g       R++vqV+ans+va++l++l+  
  KHJ33030.1   9 ITLVMVYRAWSRATLTHAGIVAAILTAGAHAIHPWN-LPFGLLITFFLAGTRVTKIKHDLKSKLTIQASGDvgkessRTHVQVFANSGVASVLSILHty 106
                 799*********************************.7***************************999766667788********************** PP

       DUF92  93 ............lasdlllvgivasyAavaaDTlaSElGkilskskprlittl..kkvppGtnGgVsllGllasllGalliallavlllllel...... 171
                             + ++ll++giva+yAavaaDT++SElG ilsks+prlit+l  +kvppGtnGgV+ +Gl+a++lG+++i+l+++ll+++++      
  KHJ33030.1 107 vlkqrgenmchpWPGSLLFIGIVANYAAVAADTFSSELG-ILSKSRPRLITSLrlRKVPPGTNGGVTSMGLAAAFLGSFIIVLTSILLTPFCQfsrpvn 204
                 *******998876699***********************.***********9988******************************************** PP

       DUF92 172 ...............lillltlaGllGsllDSlLGatlqasvvdkrtgkvvegegge.......................................... 213
                                +++l+tl+G+lGsllDS+LG++lq+svvd r gk++eg+gg+                                          
  KHJ33030.1 205 mkdsyrawtfadklwFLILMTLWGALGSLLDSFLGGWLQQSVVDVRYGKIIEGSGGKrvllenlrnkvstdtlqedlshkgevgkqnsklledsdslsp 303
                 **************88888***********************************999****************************************** PP

       DUF92 214 ..................................kvvsGl.dlLdNnaVNllsallta 236
                                                    v+sG  +lLdNn+VN+++al+++
  KHJ33030.1 304 tfnnkpraktdvkenineriqsvgskalkmnpdiAVESGSlALLDNNEVNFVMALTMS 361
                 **********************************999997799************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       638  (0.0355848); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 3117.40
//
Query:       KHJ33031.1  [L=83]
Description: putative cytochrome b5 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      4e-21   74.9   0.3    4.4e-21   74.8   0.3    1.0  1  Cyt-b5        Cytochrome b5-like Heme/Steroid binding domain
  ------ inclusion threshold ------
      0.081   13.0   0.1       0.15   12.1   0.1    1.5  1  V-ATPase_H_C  V-ATPase subunit H


Domain annotation for each model (and alignments):
>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.8   0.3   4.9e-25   4.4e-21       2      73 ..       6      77 ..       5      78 .. 0.94

  Alignments for each domain:
  == domain 1  score: 74.8 bits;  conditional E-value: 4.9e-25
                HHHHTTTE.CTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTTGGCHHHHHHHHGGEEEEE CS
      Cyt-b5  2 leelskhn.gkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvvhsekdaekllkkylvGkl 73
                 ++++ h+ ++n +++++++ VYD+++fl+khpGg  ++++ aGkDat+ f+++ hse++++k+ +k+++G++
  KHJ33031.1  6 TADVATHKdTDNGMYIIVDDGVYDITNFLEKHPGGVRILKRVAGKDATKQFWKY-HSEDVMKKYAEKLKIGTV 77
                678999996788******************************************.**********99****97 PP

>> V-ATPase_H_C  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   1.7e-05      0.15      64     103 ..      27      66 ..       5      73 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.7e-05
  V-ATPase_H_C  64 lnDigelvkllpegkkvleklkaKekimellehedeevky 103
                   ++Di+++++ +p g ++l+++ +K+   ++ + + e+v +
    KHJ33031.1  27 VYDITNFLEKHPGGVRILKRVAGKDATKQFWKYHSEDVMK 66 
                   79************************99999988777754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.19s 00:00:00.55 Elapsed: 00:00:00.35
# Mc/sec: 709.50
//
Query:       KHJ33032.1  [L=295]
Description: putative ww rsp5 wwp protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-06   26.4   1.2    1.1e-05   25.4   1.2    1.6  1  WW        WW domain
  ------ inclusion threshold ------
       0.57   10.0   2.5       0.41   10.5   0.3    1.7  2  DUF1635   Protein of unknown function (DUF1635)


Domain annotation for each model (and alignments):
>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   1.2   1.2e-09   1.1e-05       1      31 []      50      82 ..      50      82 .. 0.98

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 1.2e-09
                X-TTEEEEE-TTTT-EEEEETTT..--EESS-- CS
          WW  1 LPpGWeeqwdpdsGrvYYyNheT..getqWekP 31
                LP+GW+ q+d++sG  +Y++++   +++ W +P
  KHJ33032.1 50 LPDGWVRQYDSESGHQFYVDTSKrpPRSIWHHP 82
                8*******************************9 PP

>> DUF1635  Protein of unknown function (DUF1635)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.22     2e+03      79     115 ..      89     127 ..      80     137 .. 0.67
   2 ?   10.5   0.3   4.6e-05      0.41      37      86 ..     139     190 ..     134     223 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.22
     DUF1635  79 lsgassiederra..snnsfsssdleesivssevidptp 115
                 ls+ ss+ + r +  +++ f s ++++s vs++  ++t+
  KHJ33032.1  89 LSNLSSSGQRRPEalNKEIFNSLPSSSSSVSPNGLNETT 127
                 666667666644455666677777777888877655554 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 4.6e-05
     DUF1635  37 qLkdlLkkt.ikErdeAqeklqkllleklllqqqqqqneesaslsgass.ie 86 
                 +Lkd+L++t  +Er eA+   +++ +e    +q+ ++++ +as++g+   i+
  KHJ33032.1 139 KLKDILTSTtHEERAEARRERDRMEMEAYRRHQKIRDKTVQASITGVPQlIR 190
                 79****9761578***************9999999999999***99866544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       639  (0.0356406); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.19s 00:00:00.62 Elapsed: 00:00:00.32
# Mc/sec: 2741.02
//
Query:       KHJ33033.1  [L=292]
Description: putative sulfate transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0072   16.0   1.7        0.2   11.3   0.6    2.5  2  DUF2321     Uncharacterized protein conserved in bacteria (DU


Domain annotation for each model (and alignments):
>> DUF2321  Uncharacterized protein conserved in bacteria (DUF2321)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.6   1.1e-05       0.2       5      49 ..      82     127 ..      79     136 .. 0.86
   2 !    2.9   0.0    0.0041        73      38      77 ..     230     270 ..     224     284 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.1e-05
     DUF2321   5 aqiClnGHvitd.svnkkeelveeyCekcGektitkcpkCsteirG 49 
                 +++C + H+ ++ +++++ ++++ +  kc ++ti  c++C+++i  
  KHJ33033.1  82 KNLCSDLHNLNNtTTKTNYNSIDLFICKCPSRTIWLCKTCGQSILN 127
                 689*****9988567778889999******************9975 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.0041
     DUF2321  38 tkcpkCsteirGk.yyvegvislgkeyevpsyCkkCgkpyP 77 
                  k+ +C + i+ + +  ++v+ l  e +  s+C+ C k  P
  KHJ33033.1 230 VKISECVSGIEADgKDNDNVLALEIEGKLRSWCSWCQKVIP 270
                 5677888888755235788999999***********99888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.36
# Mc/sec: 2440.68
//
Query:       KHJ33034.1  [L=255]
Description: hypothetical protein EV44_g5522 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-12   45.8   0.0    7.1e-12   45.5   0.0    1.1  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
      0.039   14.2   0.0      0.079   13.2   0.0    1.5  1  zf-CDGSH  Iron-binding zinc finger CDGSH type


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.5   0.0   7.9e-16   7.1e-12      15     180 ..       7     176 ..       2     197 .. 0.82

  Alignments for each domain:
  == domain 1  score: 45.5 bits;  conditional E-value: 7.9e-16
       RVT_2  15 igsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaae..eelvvhqldvdsafLna..eldeevyvkqPpGfeidree 109
                   sr v  +k ++  +   k+rlv+q ++     +   + +P i+  s rL+l l+    +   +   d++ a++++  +l+ e+  k+P+    +  e
  KHJ33034.1   7 FNSRMVNEIKGKATPNPYEKSRLVIQAYHDLEKSNLL-TQSPTIQRASQRLILVLTPSllSTCSLCLRDISQAYVQSstKLNREIIAKPPAEIASQMPE 104
                 5678888899888888899**********99887765.899***********9997651156667788*******973357889*************** PP

       RVT_2 110 ekvykLnkslyGlkqapllWnekidkvLkklgferseaes.Glyvrgtgegklivalyvddlliagsdikil 180
                 + v k+ k lyG+  a++ W+++ +k   +  f ++++    l +  + e   +v++  dd li g++  il
  KHJ33034.1 105 NSVLKILKPLYGIPEAGTHWYNTYHKHHCEKLFMKTSTYDpCLLISDKKEIFGLVGMQTDDTLILGNKNFIL 176
                 ***********************9999888888776665516666665555579*********999876665 PP

>> zf-CDGSH  Iron-binding zinc finger CDGSH type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   8.8e-06     0.079      14      39 ..     222     252 ..     200     253 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 8.8e-06
    zf-CDGSH  14 dadgesvelregrev.....vaLCrCgrSkn 39 
                 +++g+++el +++ +     +++CrC +Sk+
  KHJ33034.1 222 KDQGKRIELIDDKLLtykqdYFICRCTKSKS 252
                 45555555555544466666*********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       558  (0.0311228); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1908.02
//
Query:       KHJ33035.1  [L=591]
Description: putative translation initiation factor rli1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-35  122.9   0.0      8e-17   62.0   0.0    2.5  2  ABC_tran         ABC transporter
    5.6e-12   45.6   0.0     0.0001   21.8   0.0    3.3  3  SMC_N            RecF/RecN/SMC N terminal domain
    1.9e-08   34.5  10.6       0.34   10.7   2.3    4.2  4  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
    5.4e-06   26.9   0.1     0.0082   16.6   0.1    2.9  2  AAA              ATPase family associated with various cellul
    5.9e-06   26.8   0.0      0.011   16.1   0.0    2.4  2  AAA_16           AAA ATPase domain
    6.2e-06   26.3   0.2     0.0097   15.8   0.0    2.5  2  Rad17            Rad17 P-loop domain
    3.6e-05   24.1   0.0     0.0065   16.8   0.0    2.5  2  AAA_22           AAA domain
    4.4e-05   23.1   3.5    4.4e-05   23.1   3.5    2.2  2  Fer4             4Fe-4S binding domain
    5.6e-05   23.1   0.1       0.32   10.9   0.0    2.5  2  RsgA_GTPase      RsgA GTPase
    8.8e-05   22.4   0.3       0.37   10.4   0.0    3.2  3  AAA_15           AAA ATPase domain
    0.00033   20.7   2.8     0.0051   16.9   0.1    2.4  2  Fer4_10          4Fe-4S dicluster domain
    0.00033   20.7   5.2    0.00066   19.8   5.2    1.5  1  Fer4_21          4Fe-4S dicluster domain
    0.00046   20.7   0.0        0.4   11.1   0.1    2.5  2  AAA_23           AAA domain
     0.0005   20.4   0.2       0.36   11.2   0.1    2.5  2  RNA_helicase     RNA helicase
    0.00072   19.3   0.3       0.26   11.0   0.1    2.5  2  AAA_24           AAA domain
    0.00077   19.4   2.4    0.00077   19.4   2.4    2.0  1  Fer4_6           4Fe-4S binding domain
    0.00091   19.0   0.3       0.75    9.4   0.1    3.2  3  Thymidylate_kin  Thymidylate kinase
     0.0015   18.3   0.7        1.4    8.7   0.1    2.4  2  AAA_29           P-loop containing region of AAA domain
      0.002   17.8   2.0       0.07   12.7   0.1    2.2  2  SRP54            SRP54-type protein, GTPase domain
     0.0027   17.8   0.1        0.7   10.0   0.1    2.5  2  AAA_33           AAA domain
     0.0086   15.3   0.1       0.71    9.0   0.0    2.3  2  NB-ARC           NB-ARC domain
     0.0087   16.1   0.2      0.099   12.6   0.1    2.3  2  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
     0.0099   16.4   0.1          2    9.0   0.1    2.6  2  AAA_18           AAA domain
  ------ inclusion threshold ------
      0.012   15.5   0.4      0.012   15.5   0.4    2.2  1  RLI              Possible Fer4-like domain in RNase L inhibit
      0.012   15.8   4.8      0.027   14.6   4.8    1.6  1  Fer4_9           4Fe-4S dicluster domain
      0.014   15.1   0.3          1    9.0   0.1    2.4  2  AAA_30           AAA domain
      0.015   14.0   0.0      0.041   12.5   0.0    1.7  1  AAA_13           AAA domain
      0.019   14.9   2.7       0.95    9.4   0.1    2.7  2  NACHT            NACHT domain
      0.027   14.0   0.8       0.36   10.3   0.2    2.2  2  AAA_7            P-loop containing dynein motor region
      0.029   14.3   2.6       0.54   10.1   0.2    2.7  2  NTPase_1         NTPase
      0.033   14.2   0.4        1.9    8.5   0.1    2.7  2  AAA_5            AAA domain (dynein-related subfamily)
      0.049   13.7   0.6        6.9    6.7   0.0    3.1  2  AAA_14           AAA domain
      0.068   12.4   0.8        3.3    6.9   0.0    2.7  2  Zeta_toxin       Zeta toxin
      0.089   12.5   0.0        4.5    7.0   0.0    2.3  2  VirE             Virulence-associated protein E
        0.1   13.5   0.7        0.1   13.5   0.7    2.2  2  Fer4_16          4Fe-4S double cluster binding domain
       0.11   11.7   0.1         13    4.9   0.0    2.4  2  KAP_NTPase       KAP family P-loop domain
       0.12   12.6   0.6        4.9    7.4   0.1    2.4  2  AAA_28           AAA domain
       0.16   11.1   0.1        7.3    5.7   0.0    2.2  2  DUF815           Protein of unknown function (DUF815)
       0.17   11.7   1.0       0.95    9.2   0.0    2.3  2  CLP1_P           mRNA cleavage and polyadenylation factor CLP
       0.36   11.4   7.7      0.068   13.8   1.7    1.8  2  Fer4_7           4Fe-4S dicluster domain
       0.41   10.4   2.3       0.46   10.2   0.1    2.2  2  PduV-EutP        Ethanolamine utilisation - propanediol utili
       0.52   10.4   1.9         31    4.7   0.1    2.6  2  MMR_HSR1         50S ribosome-binding GTPase
        2.8    8.2   6.8       0.14   12.3   1.2    1.9  1  Fer4_2           4Fe-4S binding domain
        2.8    8.5   8.3        1.7    9.2   2.4    2.3  2  Fer4_8           4Fe-4S dicluster domain
        7.9    7.1   8.8       0.99   10.0   2.2    2.2  2  Fer4_17          4Fe-4S dicluster domain


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.0   0.0     2e-19     8e-17       9     136 ..      86     232 ..      84     233 .. 0.78
   2 !   58.3   0.0   2.9e-18   1.1e-15       8     137 .]     357     478 ..     350     478 .. 0.83

  Alignments for each domain:
  == domain 1  score: 62.0 bits;  conditional E-value: 2e-19
                 ETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEE...........EETTCEGGGB-HHHCCHCEEEE-SS..--S-TTSBHHHH...........HHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxx...........xxxx RF
    ABC_tran   9 kegekvaivGenGaGKStLlkllagllkpteGei...........lldgkdlkeqeleslrkeigvlpqe..pqlfpeltvren...........esde 83 
                 ++g+++++vG+nG GKSt lk+l+g+lkp+ G+            +++g +l++  +++l+  ++ + +       p+  +r++            s +
  KHJ33035.1  86 RPGQVLGLVGSNGIGKSTALKILSGKLKPNLGRYenppdwqdvikHFRGSELQNYFTKILEDDLKAIVKPqyVDRIPRA-IRSTdktvrslikgsSSMK 183
                 58*******************************9777777777777777777775555555544444333113333333.4444667777787766666 PP

                 CHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  84 eiekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpt 136
                 +++++l+ l+l+++ d+ v    s LSgG+ qr a+  + +++++++++DEp+
  KHJ33035.1 184 NLDEVLDVLELNHIMDRDV----SLLSGGELQRFAIGTVCVQQADVYMFDEPS 232
                 6999999999999999999....*****************************7 PP

  == domain 2  score: 58.3 bits;  conditional E-value: 2.9e-18
                 EETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.HHHTCHHHHHHHSTTGGTTCBGESTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   8 lkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.esdeeiekalsklglkelkdtvvkss 105
                 +  +e+v+++GenG+GK+t++kllag lkp+  +i + g ++++++ +++ k  g++ q   +f+++  ++     +  +++++ l+l+e+ d+ v   
  KHJ33035.1 357 FTDSEIVVMMGENGTGKTTFCKLLAGSLKPDGNQI-VSGMKVSMKPQKITPKFEGTVRQL--FFKKI--KTAfLLPQFQTDVVKPLKLDEFIDQEV--- 447
                 6789*******************************.778888887888888888888877..33333..112244455778899999999888888... PP

                 SGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 106 pssLSgGqkqrvalarallkkpkllllDEpta 137
                  ++LSgG+ qrva++ +l   ++++l+DEp+a
  KHJ33035.1 448 -KTLSGGELQRVAIVLSLGLPADIYLIDEPSA 478
                 .*****************************75 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   2.6e-07    0.0001      13     201 ..      77     266 ..      72     282 .. 0.73
   2 ?    4.3   0.0      0.06        24      23      41 ..     359     377 ..     348     382 .. 0.80
   3 !   15.4   0.0   2.4e-05    0.0097     134     194 ..     447     506 ..     392     520 .. 0.79

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 2.6e-07
                 EECEEEEEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEESSSSSSCEEEEEEEETTSE.EE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx RF
       SMC_N  13 yagktvilpfsksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkklkiekeevsisrrvkrkge.se 110
                 ++ ++  +p   ++  +vG+NG GKs  l  ++  L  +  +     + +d+i++  +++++++   +i+ +++ k+++  +    i r + ++++  +
  KHJ33035.1  77 FKLHRLPTPRPGQVLGLVGSNGIGKSTALKILSGKLKPNLGRYENPPDWQDVIKH-FRGSELQNYFTKIL-EDDLKAIVKPQYVDRIPRAIRSTDKtVR 173
                 55555666666778889*********99998888877777777778899*****9.67777777666775.4444444444445667777665555266 PP

                 EEETTEEE-H..HHHHHHHHCTT-...STTCS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCT.TSEEEEE-SSHHH CS
                 xxxxxxxxxx..xxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx RF
       SMC_N 111 ykingkevtk..kevsellesagi...skelLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksk.naQfivislreem 201
                   i+g++  k   ev ++le  +i   + +lLSgGe +  a+  +     v++a +y++De  + LD k++   a+++++    n  +i++ ++  +
  KHJ33035.1 174 SLIKGSSSMKnlDEVLDVLELNHImdrDVSLLSGGELQRFAIGTV----CVQQADVYMFDEPSSYLDVKQRLSAAKMIRSLLRpNDYVICVEHDLSV 266
                 7788877655458999999999883334569*****998777666....788899************************765415666776666555 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.06
                 TSSEEEEEESTTSSHHHHH CS
                 xxxxxxxxxxxxxxxxxxx RF
       SMC_N  23 sksftaivGpNGSGKsnll 41 
                 ++++ +++G+NG GK+ ++
  KHJ33035.1 359 DSEIVVMMGENGTGKTTFC 377
                 45688999*******9875 PP

  == domain 3  score: 15.4 bits;  conditional E-value: 2.4e-05
                 TTCS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHH...HHCTTSEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxx RF
       SMC_N 134 kelLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellk...eksknaQfiv 194
                  ++LSgGe + va+ L + +    pa +yl+De  a LD +++ + a+++k    +sk++ fiv
  KHJ33035.1 447 VKTLSGGELQRVAIVLSLGL----PADIYLIDEPSAYLDSEQRIIAARVIKrfiMHSKKTAFIV 506
                 348*****887777776655....99***********************995555677777776 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   2.3   0.00085      0.34       3      20 ..      92     109 ..      90     113 .. 0.91
   2 !   10.4   0.0     0.001      0.42     133     273 ..     114     245 ..     109     258 .. 0.71
   3 !    7.6   0.0    0.0074       2.9       2      21 ..     363     382 ..     362     408 .. 0.78
   4 !    8.9   0.1    0.0029       1.2     178     275 ..     406     485 ..     401     507 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00085
      AAA_21   3 vliGpNgsGKSnLLdald 20 
                 +l+G Ng GKS+ L++l+
  KHJ33035.1  92 GLVGSNGIGKSTALKILS 109
                 79***************7 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.001
      AAA_21 133 sepndlqfgkaltditsrawsllllldglrkerigllnifadyfgfakekrllqrlvrslklveielsdlgegeeliasvderlrergvvflengdgqe 231
                  +  ++++++++ d++++++ ++l        +  +  i  d ++   ++++++r  r ++  +  ++ l +g+ +++  de+     +  le ++  +
  KHJ33035.1 114 PNLGRYENPPDWQDVIKHFRGSEL--------QNYFTKILEDDLKAIVKPQYVDRIPRAIRSTDKTVRSLIKGSSSMKNLDEV-----LDVLELNHIMD 199
                 567778888888888888887777........555555555555555555555555566666666666666666666666655.....44488889999 PP

      AAA_21 232 lparelSdGtkrllalltallralkkgsllliDEpEngLHP.......k 273
                 ++++ lS G ++ +a+ t + +++   +++ +DEp + L+        k
  KHJ33035.1 200 RDVSLLSGGELQRFAIGTVCVQQA---DVYMFDEPSSYLDVkqrlsaaK 245
                 99********************99...9***********9944444443 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.0074
      AAA_21   2 nvliGpNgsGKSnLLdaldl 21 
                  v+ G Ng+GK+++ ++l +
  KHJ33035.1 363 VVMMGENGTGKTTFCKLLAG 382
                 6889**********999954 PP

  == domain 4  score: 8.9 bits;  conditional E-value: 0.0029
      AAA_21 178 fakekrllqrlvrslklveielsdlgegeeliasvderlrergvvflengdgqelparelSdGtkrllalltallralkkgsllliDEpEngLHPkll 275
                 ++ e++ +q + +++k++++ +++ +++++  ++  + ++e               +  lS G ++  a++++l   +   +++liDEp + L+ +  
  KHJ33035.1 406 PKFEGTVRQLFFKKIKTAFLLPQFQTDVVKPLKLDEFIDQE---------------VKTLSGGELQRVAIVLSLGLPA---DIYLIDEPSAYLDSEQR 485
                 56677788888888888888888888888888888888777...............7788999999999999999988...************98443 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0     0.019       7.4       3      37 ..      93     140 ..      91     197 .. 0.68
   2 !   16.6   0.1   2.1e-05    0.0082       1      50 [.     363     416 ..     363     434 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.019
                 EESSTTSSHHHHHHHHHHHHTHE.............EEEEETTTCSSS CS
         AAA   3 lyGppGtGKTllakavakelgve.............fleisgsellsk 37 
                 l+G  G+GK+++ k +  +l+ +             +  + gsel + 
  KHJ33035.1  93 LVGSNGIGKSTALKILSGKLKPNlgryenppdwqdvIKHFRGSELQNY 140
                 89*****************98663333444444444444444444443 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 2.1e-05
                 EEEESSTTSSHHHHHHHHHHHHT...HE.EEEEETTTCSSSSTTHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelg...ve.fleisgsellskyvgesekkirelf 50 
                 v+++G  GtGKT+++k +a +l+    + +  +++s   +k+  + e  +r+lf
  KHJ33035.1 363 VVMMGENGTGKTTFCKLLAGSLKpdgNQiVSGMKVSMKPQKITPKFEGTVRQLF 416
                 5789*****************964332212223333333445566666666665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0069       2.7      16      51 ..      79     115 ..      76     214 .. 0.73
   2 !   16.1   0.0   2.8e-05     0.011      22     131 ..     355     500 ..     347     524 .. 0.62

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0069
      AAA_16  16 lervrsgrp.elvllsGesGvGKsslvrellralekd 51 
                 l+r+ ++rp +++ l+G  G+GKs+ ++ l   l+ +
  KHJ33035.1  79 LHRLPTPRPgQVLGLVGSNGIGKSTALKILSGKLKPN 115
                 78889999989999***********998887777776 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 2.8e-05
      AAA_16  22 grp...elvllsGesGvGKsslvrellralekdg.gif....lrgkcdqlesaipy.....sa.laqalareellrqllde.aesaeleawrekleeal 105
                 g+    e+v+  Ge G+GK++  + l+ +l+ dg  i+    ++ k ++    +p       + + + +++  ll q  ++     ++   +e++++++
  KHJ33035.1 355 GDFtdsEIVVMMGENGTGKTTFCKLLAGSLKPDGnQIVsgmkVSMKPQKI---TPKfegtvRQlFFKKIKTAFLLPQFQTDvV---KPLKLDEFIDQEV 447
                 5555559**************************73333343444444444...333333332225555555555555555531...2333333333333 PP

      AAA_16 106 a...........................avpelagaeasrllellkrllalls 131
                 +                           +++ l+++++   ++++kr+++ ++
  KHJ33035.1 448 KtlsggelqrvaivlslglpadiylidePSAYLDSEQRIIAARVIKRFIMHSK 500
                 34446666677777777777777777766666666666666666777665555 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   2.4e-05    0.0097      43      84 ..      86     127 ..      75     146 .. 0.84
   2 !    7.8   0.0    0.0072       2.9      45      89 ..     360     404 ..     349     441 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 2.4e-05
       Rad17  43 rkkriLLisGPsGCgkstvvkvLskelgiklrewlnpvslke 84 
                 r+ ++L + G  G gkst++k+Ls +l ++l  + np   ++
  KHJ33035.1  86 RPGQVLGLVGSNGIGKSTALKILSGKLKPNLGRYENPPDWQD 127
                 56789******************************9977654 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0072
       Rad17  45 kriLLisGPsGCgkstvvkvLskelgiklrewlnpvslkepdnqk 89 
                  +i+++ G  G gk+t  k L+  l ++ ++ + ++++   + + 
  KHJ33035.1 360 SEIVVMMGENGTGKTTFCKLLAGSLKPDGNQIVSGMKVSMKPQKI 404
                 46999****************************999976655543 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.093        37       6      29 ..      89     112 ..      86     132 .. 0.84
   2 !   16.8   0.0   1.6e-05    0.0065       6      79 ..     361     443 ..     358     503 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.093
      AAA_22   6 gilvvtGesGtGKTtllrrlleql 29 
                 ++l ++G  G+GK+t l+ l  +l
  KHJ33035.1  89 QVLGLVGSNGIGKSTALKILSGKL 112
                 566799***********9887665 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 1.6e-05
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeakaee..erpevv..fvtlpsstsskdl.lrellralglelka....erlsseell 79 
                  i+v +Ge GtGKTt ++ l+ +l+ + ++    ++++    ++t++ +++ ++l ++++  a+ l++      ++l+++e++
  KHJ33035.1 361 EIVVMMGENGTGKTTFCKLLAGSLKPDGNQIVsgMKVSMKpqKITPKFEGTVRQLfFKKIKTAFLLPQFQtdvvKPLKLDEFI 443
                 578999******************76555544665555558899999999999888999999999988886666444443333 PP

>> Fer4  4Fe-4S binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.6       3.2   1.3e+03      13      20 ..       9      16 ..       8      17 .. 0.88
   2 !   23.1   3.5   1.1e-07   4.4e-05       3      23 ..      35      55 ..      33      56 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 3.2
                HHHHHSTT CS
        Fer4 13 aCvevCPv 20
                +C + CPv
  KHJ33035.1  9 ECKKSCPV 16
                69*****8 PP

  == domain 2  score: 23.1 bits;  conditional E-value: 1.1e-07
                EETTTSSS-THHHHHSTTTEE CS
        Fer4  3 ideekCigCGaCvevCPvgAI 23
                i e++CigCG+C + CP+gAI
  KHJ33035.1 35 ISENLCIGCGICPKKCPFGAI 55
                899*****************9 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0021      0.85      97     125 ..      86     114 ..      62     122 .. 0.80
   2 !   10.9   0.0    0.0008      0.32      98     128 ..     359     389 ..     329     400 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0021
                  CTTSEEEEECSTTSSHHHHHHHHCTT--- CS
  RsgA_GTPase  97 lkdktsvlvGqSGvGKStLinallpelel 125
                    +++  lvG+ G+GKSt ++ l ++l+ 
   KHJ33035.1  86 RPGQVLGLVGSNGIGKSTALKILSGKLKP 114
                  5578899**************99998765 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.0008
                  TTSEEEEECSTTSSHHHHHHHHCTT-----S CS
  RsgA_GTPase  98 kdktsvlvGqSGvGKStLinallpelelktg 128
                  +++++v++G+ G GK+t+ + l+++l+   +
   KHJ33035.1 359 DSEIVVMMGENGTGKTTFCKLLAGSLKPDGN 389
                  4599******************998765555 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00093      0.37      28      44 ..      93     109 ..      87     188 .. 0.78
   2 !    8.1   0.0    0.0049       1.9      23      43 ..     360     380 ..     351     441 .. 0.88
   3 ?   -0.9   0.0       2.7   1.1e+03     325     343 ..     469     487 ..     465     508 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00093
      AAA_15  28 liGkNnsGKSsileald 44 
                 l+G N++GKS++l++l 
  KHJ33035.1  93 LVGSNGIGKSTALKILS 109
                 8**************94 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0049
      AAA_15  23 eeltvliGkNnsGKSsileal 43 
                 +e+ v  G+N++GK+++ ++l
  KHJ33035.1 360 SEIVVMMGENGTGKTTFCKLL 380
                 339999***********9998 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 2.7
      AAA_15 325 villiEEPEahLHpqaqkv 343
                 +i+li+EP a+L  ++  +
  KHJ33035.1 469 DIYLIDEPSAYLDSEQRII 487
                 89********996665555 PP

>> Fer4_10  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.4      0.19        76      14      21 ..       9      16 ..       7      31 .. 0.82
   2 !   16.9   0.1   1.3e-05    0.0051       3      23 ..      34      54 ..      32      81 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.19
     Fer4_10 14 kCvkaCPa 21
                +C+k+CP+
  KHJ33035.1  9 ECKKSCPV 16
                8******9 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 1.3e-05
     Fer4_10  3 vidddtCirCgkCvkaCPadl 23
                 i ++ Ci+Cg C k CP+ +
  KHJ33035.1 34 FISENLCIGCGICPKKCPFGA 54
                578899************944 PP

>> Fer4_21  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   5.2   1.7e-06   0.00066      13      58 ..       9      56 ..       5      57 .. 0.83

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 1.7e-06
     Fer4_21 13 kCliaCe..dtshqaieidaktvlkvv.edeCvGCnlCssvCPvedcie 58
                +C ++C+   ++  +ie++++++++ + e+ C+GC +C + CP  ++i+
  KHJ33035.1  9 ECKKSCPvvRSGRLCIEVTPDAKIAFIsENLCIGCGICPKKCPF-GAIN 56
                69999983347889*****999998874789************7.8886 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0     0.019       7.4      24      52 ..      93     121 ..      77     250 .. 0.59
   2 !   11.1   0.1     0.001       0.4      16      37 ..     356     378 ..     345     453 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.019
      AAA_23  24 ItGpNGaGKTTildAiklaLygetprlsr 52 
                 ++G NG GK+T l  +   L    +r ++
  KHJ33035.1  93 LVGSNGIGKSTALKILSGKLKPNLGRYEN 121
                 79*********998776555544444444 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.001
      AAA_23  16 dF.skgltlItGpNGaGKTTild 37 
                 dF ++ +++  G+NG+GKTT+  
  KHJ33035.1 356 DFtDSEIVVMMGENGTGKTTFCK 378
                 6777899*************865 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0     0.024       9.4       3      26 ..      93     116 ..      91     155 .. 0.84
   2 !   11.2   0.1   0.00091      0.36       1      23 [.     363     385 ..     363     405 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.024
  RNA_helicase   3 lyGpsgeGKStlakeLakallkkl 26 
                   l+G++g+GKSt+ k L+ +l  +l
    KHJ33035.1  93 LVGSNGIGKSTALKILSGKLKPNL 116
                   78************9988887554 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00091
  RNA_helicase   1 iwlyGpsgeGKStlakeLakall 23 
                   +++ G++g+GK+t++k La +l 
    KHJ33035.1 363 VVMMGENGTGKTTFCKLLAGSLK 385
                   6899*************988776 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0     0.024       9.7       4      22 ..      90     108 ..      88     128 .. 0.86
   2 !   11.0   0.1   0.00066      0.26       5      22 ..     363     380 ..     360     421 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.024
      AAA_24   4 kiliyGpsgiGKTtlakel 22 
                  + ++G++giGK+t +k l
  KHJ33035.1  90 VLGLVGSNGIGKSTALKIL 108
                 5789**********99977 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00066
      AAA_24   5 iliyGpsgiGKTtlakel 22 
                 ++++G++g+GKTt++k l
  KHJ33035.1 363 VVMMGENGTGKTTFCKLL 380
                 789************987 PP

>> Fer4_6  4Fe-4S binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   2.4   1.9e-06   0.00077       2      24 .]      33      55 ..      32      55 .. 0.94

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.9e-06
      Fer4_6  2 veidpdkCigCgdCvrvCPegai 24
                + i +++CigCg C + CP+gai
  KHJ33035.1 33 AFISENLCIGCGICPKKCPFGAI 55
                7899******************8 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.039        15       3      43 ..      95     133 ..      93     146 .. 0.76
   2 ?   -0.1   0.0       1.6   6.3e+02      62      95 ..     237     269 ..     221     323 .. 0.87
   3 !    9.4   0.1    0.0019      0.75       3      28 ..     367     392 ..     366     397 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.039
                      ESTTSSHHHHHHHHHHHHHHTTE.EEEESSSTTSHHHHHHH CS
  Thymidylate_kin   3 GlDGaGKttqaellkerlkeegikvvltrepggteiGekir 43 
                      G +G GK+t +++l  +lk +  +     +p+  ++ + +r
       KHJ33035.1  95 GSNGIGKSTALKILSGKLKPNLGR--YENPPDWQDVIKHFR 133
                      889***************999865..555665555555555 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.6
                      HHHHHHTTHHHHHHHHHTT-EEEEES-HHHHHHH CS
  Thymidylate_kin  62 aadriehleekikpalkqgktvivdRylfSslaY 95 
                      +++r  ++++ i   l  ++ vi+  + +S+l Y
       KHJ33035.1 237 VKQR-LSAAKMIRSLLRPNDYVICVEHDLSVLDY 269
                      5566.778889999999999*****999999877 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.0019
                      ESTTSSHHHHHHHHHHHHHHTTE.EE CS
  Thymidylate_kin   3 GlDGaGKttqaellkerlkeegikvv 28 
                      G +G+GKtt+++ll+  lk  g ++v
       KHJ33035.1 367 GENGTGKTTFCKLLAGSLKPDGNQIV 392
                      668****************9998754 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.1    0.0036       1.4      12      39 ..      77     105 ..      73     114 .. 0.84
   2 !    7.5   0.1    0.0085       3.4      19      38 ..     357     376 ..     346     387 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0036
      AAA_29  12 fdghtieidlkg.atlltGpsGsGKSTll 39 
                 f+ h+++  + g +  l+G +G GKST l
  KHJ33035.1  77 FKLHRLPTPRPGqVLGLVGSNGIGKSTAL 105
                 6667778877887888***********76 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0085
      AAA_29  19 idlkgatlltGpsGsGKSTl 38 
                 ++ +++++++G++G+GK+T+
  KHJ33035.1 357 FTDSEIVVMMGENGTGKTTF 376
                 555668999**********7 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.2     0.058        23       3      26 ..      90     113 ..      88     119 .. 0.81
   2 !   12.7   0.1   0.00018      0.07       2      32 ..     361     391 ..     360     394 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.058
                 EEEEEESTTSSHHHHHHHHHHHHH CS
       SRP54   3 villvGlqGaGKTttlaKLaallk 26 
                 v+ lvG +G+GK t+l  L+ +lk
  KHJ33035.1  90 VLGLVGSNGIGKSTALKILSGKLK 113
                 5669**********9987776665 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00018
                 EEEEEEESTTSSHHHHHHHHHHHHHHTTS-E CS
       SRP54   2 nvillvGlqGaGKTttlaKLaallkkegkkv 32 
                 ++++++G +G+GKTt +  La  lk +g+++
  KHJ33035.1 361 EIVVMMGENGTGKTTFCKLLAGSLKPDGNQI 391
                 5799*****************9999887665 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.056        22       4      24 ..      93     113 ..      90     165 .. 0.89
   2 !   10.0   0.1    0.0018       0.7       1      23 [.     362     384 ..     362     397 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.056
      AAA_33   4 lvGlpGsGKstlaerllkklg 24 
                 lvG +G GKst ++ l  kl+
  KHJ33035.1  93 LVGSNGIGKSTALKILSGKLK 113
                 89*********9998877665 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.0018
      AAA_33   1 lvllvGlpGsGKstlaerllkkl 23 
                 +v++ G +G+GK+t+ + l+  l
  KHJ33035.1 362 IVVMMGENGTGKTTFCKLLAGSL 384
                 599*************9998666 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0    0.0018      0.71      21      91 ..      89     160 ..      78     198 .. 0.75
   2 ?    3.7   0.1     0.073        29      19      38 ..     359     378 ..     349     385 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0018
                 EEEEEEESTTSSHHHHHHHHCCSHCCCCCCBT.EEEEEEEESXXHHHHHHHXXHHHHHCCCTTSSSS-STTS CS
      NB-ARC  21 lvvalvGmgGvGKttlakqilnksdevegrFd.svawvvvsktdkseeiletilkeLslseddleekeeves 91 
                  v++lvG  G+GK+t +k    k++   gr++    w  v k++  +e+++   k L++  + + + + v+ 
  KHJ33035.1  89 QVLGLVGSNGIGKSTALKILSGKLKPNLGRYEnPPDWQDVIKHFRGSELQNYFTKILEDDLKAIVKPQYVDR 160
                 599************999999999999999996678999999999999999998888666555555554444 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.073
                 CSEEEEEEESTTSSHHHHHH CS
      NB-ARC  19 qslvvalvGmgGvGKttlak 38 
                 +s +v ++G  G GKtt  k
  KHJ33035.1 359 DSEIVVMMGENGTGKTTFCK 378
                 5669*************875 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0       1.4   5.6e+02      19      42 ..      88     111 ..      69     121 .. 0.78
   2 !   12.6   0.1   0.00025     0.099      19      46 ..     360     387 ..     340     394 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 1.4
                 TEEEEEEESTTSSHHHHHHHHHHH CS
        TsaE  19 gdvilLeGdLGaGKTtlvrglaka 42 
                 g+v+ L G  G GK+t  + l  +
  KHJ33035.1  88 GQVLGLVGSNGIGKSTALKILSGK 111
                 77899***********99877655 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 0.00025
                 TEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE  19 gdvilLeGdLGaGKTtlvrglakalgve 46 
                 ++++++ G+ G+GKTt+++ la +l+ +
  KHJ33035.1 360 SEIVVMMGENGTGKTTFCKLLAGSLKPD 387
                 5679*****************9988765 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.095        38       3      42 ..      93     130 ..      91     202 .. 0.65
   2 !    9.0   0.1    0.0051         2       3      21 ..     365     383 ..     363     413 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.095
      AAA_18   3 ltGtpGvGKttlakeLskrlgfgvnlrdvakenglllevd 42 
                 l G  G GK+t  k Ls +l    nl+ +    ++ +   
  KHJ33035.1  93 LVGSNGIGKSTALKILSGKL--KPNLGRYENPPDWQDVIK 130
                 7889999*********9998..333333333333333333 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0051
      AAA_18   3 ltGtpGvGKttlakeLskr 21 
                  +G  G+GKtt++k L+ +
  KHJ33035.1 365 MMGENGTGKTTFCKLLAGS 383
                 57888***********865 PP

>> RLI  Possible Fer4-like domain in RNase L inhibitor, RLI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   0.4   2.9e-05     0.012      17      35 .]       7      22 ..       6      22 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.9e-05
                TTHHHHHTTSEEEESS--S CS
         RLI 17 tgkkcarfcpvrlvrtgkk 35
                ++ +c+++cpv  vr+g++
  KHJ33035.1  7 RQ-ECKKSCPV--VRSGRL 22
                57.********..****95 PP

>> Fer4_9  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   4.8   6.7e-05     0.027       7      51 .]       9      55 ..       7      59 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 6.7e-05
      Fer4_9  7 aCveaCpagvvvedaaerkarlraase..eaCigCgaCveaCpkgai 51
                +C ++Cp     + + e +   ++a    + CigCg C ++Cp gai
  KHJ33035.1  9 ECKKSCPVVRSGRLCIEVTPDAKIAFIseNLCIGCGICPKKCPFGAI 55
                6888887666655554444433332223389************9987 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0      0.13        51      19      39 ..      89     109 ..      83     120 .. 0.84
   2 ?    9.0   0.1    0.0026         1      17      50 ..     360     392 ..     354     400 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.13
      AAA_30  19 rvavltGpAGtGKttalkalr 39 
                 +v  l+G  G GK+talk l 
  KHJ33035.1  89 QVLGLVGSNGIGKSTALKILS 109
                 68889************9875 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0026
      AAA_30  17 gdrvavltGpAGtGKttalkalreaweaaggrvi 50 
                 +  ++v+ G  GtGKtt  k l+  ++ +g +++
  KHJ33035.1 360 S-EIVVMMGENGTGKTTFCKLLAGSLKPDGNQIV 392
                 3.3899**************99998888877665 PP

>> AAA_13  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0    0.0001     0.041      20      55 ..     364     399 ..     355     422 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.0001
      AAA_13  20 liYGwNGaGKTtLSrllrslelgetepkfangsiei 55 
                 ++ G NG+GKTt+++ll+   +   ++  +  ++++
  KHJ33035.1 364 VMMGENGTGKTTFCKLLAGSLKPDGNQIVSGMKVSM 399
                 667**************9864444444444445555 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.4     0.061        24       3      24 ..      91     112 ..      89     117 .. 0.82
   2 ?    9.4   0.1    0.0024      0.95       2      25 ..     362     385 ..     361     394 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.061
                 EEEEC-TTTCHHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklalaw 24 
                 + l G +G+GK+t l+ l  ++
  KHJ33035.1  91 LGLVGSNGIGKSTALKILSGKL 112
                 5689**********99887665 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.0024
                 CEEEEC-TTTCHHHHHHHHHHHHC CS
       NACHT   2 lvilqGeaGsGKTtLlqklalawa 25 
                 +v++ Ge+G GKTt+ + la  ++
  KHJ33035.1 362 IVVMMGENGTGKTTFCKLLAGSLK 385
                 6899***********998887665 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0       0.4   1.6e+02      38      58 ..      93     113 ..      85     120 .. 0.84
   2 ?   10.3   0.2   0.00091      0.36      35      94 ..     362     424 ..     357     434 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.4
       AAA_7  38 lvGptGtGKtviikdllkkld 58 
                 lvG+ G GK++ +k l  kl+
  KHJ33035.1  93 LVGSNGIGKSTALKILSGKLK 113
                 8**********9998777776 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00091
       AAA_7  35 pvllvGptGtGKtviikdllkkldkekyls...ltinfsaqtsanqlqdiiesklekrrkgvy 94 
                  v+++G+ GtGKt+ +k l  +l+++  ++   ++++++ q    ++  ++ + + k+ k+ +
  KHJ33035.1 362 IVVMMGENGTGKTTFCKLLAGSLKPDGNQIvsgMKVSMKPQKITPKFEGTVRQLFFKKIKTAF 424
                 5899**************999999765544111456666666666666666666666666655 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.2      0.17        70       4      24 ..      93     113 ..      90     117 .. 0.86
   2 ?   10.1   0.2    0.0014      0.54       2      34 ..     363     396 ..     362     404 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.17
                 EE--TTSSHHHHHHHHHHHH. CS
    NTPase_1   4 iTGppGvGKtTlvkkvlellk 24 
                 + G+ G+GK+T +k ++ +lk
  KHJ33035.1  93 LVGSNGIGKSTALKILSGKLK 113
                 789**********99998886 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.0014
                 EEEE--TTSSHHHHHHHHHHHH....GGGEEEEE CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkss.gvkvgGfy 34 
                 v++ G+ G+GKtT++k ++  lk + +  v+G+ 
  KHJ33035.1 363 VVMMGENGTGKTTFCKLLAGSLKPDgNQIVSGMK 396
                 5678******************988345567765 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0      0.27   1.1e+02       4      24 ..      93     113 ..      91     126 .. 0.84
   2 ?    8.5   0.1    0.0047       1.9       2      24 ..     363     386 ..     362     411 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.27
                 EE--SSSSHHHHHHHGGGGBS CS
       AAA_5   4 LvGppGtgKselaerlaaaln 24 
                 LvG  G+gKs+  + l+  l+
  KHJ33035.1  93 LVGSNGIGKSTALKILSGKLK 113
                 9***********999998874 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0047
                 EEEE--SSSSHHHHHHHGGGGB.S CS
       AAA_5   2 vlLvGppGtgKselaerlaaal.n 24 
                 v++ G+ GtgK+++ + la  l  
  KHJ33035.1 363 VVMMGENGTGKTTFCKLLAGSLkP 386
                 799***************988862 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.1      0.12        48       3      30 ..      89     114 ..      87     193 .. 0.55
   2 ?    6.7   0.0     0.017       6.9       3      33 ..     361     391 ..     359     449 .. 0.71

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.12
      AAA_14   3 kilvitGaRrvGKTtllkqlikellvkk 30 
                 ++l ++G   +GK+t lk l  +l   +
  KHJ33035.1  89 QVLGLVGSNGIGKSTALKILSGKLK--P 114
                 6889999*********987765555..3 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.017
      AAA_14   3 kilvitGaRrvGKTtllkqlikellvkkesi 33 
                 +i+v++G   +GKTt++k l+ +l  + ++i
  KHJ33035.1 361 EIVVMMGENGTGKTTFCKLLAGSLKPDGNQI 391
                 799***************9998877333333 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0      0.14        57      20      41 ..      92     113 ..      75     121 .. 0.80
   2 ?    6.9   0.0    0.0084       3.3      18      47 ..     362     391 ..     355     396 .. 0.90

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.14
  Zeta_toxin  20 llgGqpGAGKselaellkdele 41 
                  l+G+ G GKs++++ l  +l+
  KHJ33035.1  92 GLVGSNGIGKSTALKILSGKLK 113
                 489************9998886 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0084
  Zeta_toxin  18 lillgGqpGAGKselaellkdelerqgnvv 47 
                 ++++ G  G GK++  +ll+ +l+++gn +
  KHJ33035.1 362 IVVMMGENGTGKTTFCKLLAGSLKPDGNQI 391
                 799********************9998876 PP

>> VirE  Virulence-associated protein E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0     0.011       4.5      53      75 ..      89     111 ..      78     160 .. 0.84
   2 ?    2.9   0.0      0.19        77      53      74 ..     361     382 ..     348     397 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.011
        VirE  53 fvlvLvGkqgsgKstfleklgee 75 
                 +vl LvG+ g+gKst l++l+++
  KHJ33035.1  89 QVLGLVGSNGIGKSTALKILSGK 111
                 6899****************765 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.19
        VirE  53 fvlvLvGkqgsgKstfleklge 74 
                 +++v+ G+ g+gK+tf + l++
  KHJ33035.1 361 EIVVMMGENGTGKTTFCKLLAG 382
                 6899*************99955 PP

>> Fer4_16  4Fe-4S double cluster binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.4       8.9   3.5e+03       7      14 ..       9      16 ..       6      17 .. 0.60
   2 ?   13.5   0.7   0.00026       0.1       2      18 ..      40      56 ..      23      79 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 8.9
     Fer4_16  7 kCaevCPt 14
                +C ++CP+
  KHJ33035.1  9 ECKKSCPV 16
                45566654 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 0.00026
     Fer4_16  2 CgtCgkCaevCPtnaik 18
                C++Cg C + CP +ai+
  KHJ33035.1 40 CIGCGICPKKCPFGAIN 56
                88888888888888886 PP

>> KAP_NTPase  KAP family P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.032        13      14      46 ..      82     114 ..      70     176 .. 0.87
   2 ?    4.3   0.0     0.051        20      22      47 ..     362     387 ..     348     505 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.032
  KAP_NTPase  14 eptlatpivvgLygkWGsGKssllnkledelke 46 
                  pt++++ v+gL g  G GKs+ l+ l  +lk 
  KHJ33035.1  82 LPTPRPGQVLGLVGSNGIGKSTALKILSGKLKP 114
                 578899*******************99988875 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.051
  KAP_NTPase  22 vvgLygkWGsGKssllnkledelkef 47 
                 +v+  g+ G+GK++++++l  +lk  
  KHJ33035.1 362 IVVMMGENGTGKTTFCKLLAGSLKPD 387
                 67778999***********9888765 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0      0.25        99       4      20 ..      93     109 ..      91     123 .. 0.87
   2 ?    7.4   0.1     0.012       4.9       2      21 ..     363     382 ..     362     398 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.25
      AAA_28   4 itGgestGKTtlleaLa 20 
                 ++G  + GK+t l+ L+
  KHJ33035.1  93 LVGSNGIGKSTALKILS 109
                 68************998 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.012
      AAA_28   2 ivitGgestGKTtlleaLaa 21 
                 +v++G  +tGKTt ++ La 
  KHJ33035.1 363 VVMMGENGTGKTTFCKLLAG 382
                 8999*************994 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.1      0.12        47      58      77 ..      93     112 ..      81     117 .. 0.83
   2 ?    5.7   0.0     0.018       7.3      55      85 ..     362     392 ..     338     416 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.12
      DUF815  58 LwGarGtGKSslvkallney 77 
                 L+G+ G GKS+ +k l  ++
  KHJ33035.1  93 LVGSNGIGKSTALKILSGKL 112
                 99***********9987665 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.018
      DUF815  55 nvLLwGarGtGKSslvkallneyaeegLrli 85 
                  v+++G+ GtGK + +k l  +++ +g +++
  KHJ33035.1 362 IVVMMGENGTGKTTFCKLLAGSLKPDGNQIV 392
                 5899***************999998886666 PP

>> CLP1_P  mRNA cleavage and polyadenylation factor CLP1 P-loop
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.2       1.2   4.8e+02       1      18 [.      95     112 ..      95     118 .. 0.87
   2 ?    9.2   0.0    0.0024      0.95       1      24 [.     367     390 ..     367     406 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 1.2
      CLP1_P   1 GpkdsGKSTlarlLlNya 18 
                 G++  GKST  ++L  ++
  KHJ33035.1  95 GSNGIGKSTALKILSGKL 112
                 78899*********9876 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0024
      CLP1_P   1 GpkdsGKSTlarlLlNyalrkgrk 24 
                 G++ +GK+T+++lL+  +   g++
  KHJ33035.1 367 GENGTGKTTFCKLLAGSLKPDGNQ 390
                 8899***********998777766 PP

>> Fer4_7  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   8.1    0.0055       2.2       8      52 .]      10      54 ..       8      54 .. 0.67
   2 ?   13.8   1.7   0.00017     0.068       2      19 ..      40      57 ..      39      67 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0055
      Fer4_7  8 CvaaCpvkaieldeeenekgtekveidpekClgCgaCvavCPtga 52
                C + Cpv        e+ +  + + i+++ C+gCg C + CP+ga
  KHJ33035.1 10 CKKSCPVVRSGRLCIEVTPDAKIAFISENLCIGCGICPKKCPFGA 54
                888888333333333334444666778889************997 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 0.00017
      Fer4_7  2 CigCgaCvaaCpvkaiel 19
                CigCg C + Cp +ai++
  KHJ33035.1 40 CIGCGICPKKCPFGAINI 57
                9***********999976 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2       8.8   3.5e+03       6      23 ..      93     110 ..      90     112 .. 0.86
   2 ?   10.2   0.1    0.0012      0.46       3      23 ..     362     382 ..     360     393 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 8.8
   PduV-EutP   6 liGkvgsGKttLtqalkg 23 
                 l+G+ g GK t  + l+g
  KHJ33035.1  93 LVGSNGIGKSTALKILSG 110
                 89********99988887 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0012
   PduV-EutP   3 killiGkvgsGKttLtqalkg 23 
                  ++++G+ g+GKtt ++ l g
  KHJ33035.1 362 IVVMMGENGTGKTTFCKLLAG 382
                 6899*************9987 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.3     0.084        33       3      23 ..      92     113 ..      90     122 .. 0.84
   2 ?    4.7   0.1     0.078        31       2      22 ..     363     388 ..     362     507 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.084
                 EEEESTTSSHHHHHHHHHTS.T CS
    MMR_HSR1   3 aivGrpNvGKStLinaltge.k 23 
                 ++vG    GKSt ++ l+g+ k
  KHJ33035.1  92 GLVGSNGIGKSTALKILSGKlK 113
                 89*************9999744 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.078
                 EEEEESTTSSHHHHHHHHHT.....S CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltg.....e 22 
                 v+ +G   +GK+t+ + l g      
  KHJ33035.1 363 VVMMGENGTGKTTFCKLLAGslkpdG 388
                 7899**************98333330 PP

>> Fer4_2  4Fe-4S binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   1.2   0.00035      0.14       3      21 ..      33      51 ..      30      52 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00035
      Fer4_2  3 vvvdtdrCigCgaCvsaCP 21
                +++ ++ CigCg+C + CP
  KHJ33035.1 33 AFISENLCIGCGICPKKCP 51
                567789********77788 PP

>> Fer4_8  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   9.1      0.23        92      11      63 ..      10      52 ..       8      54 .. 0.66
   2 ?    9.2   2.4    0.0042       1.7       5      17 ..      40      52 ..      36      85 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.23
      Fer4_8 11 CqsaCpvlrrtkkhlldargeaaedvqeeqvleeeealwsCttcgaCtevCpv 63
                C+++Cpv+r+ +  +  +++ +++   +e         + C +cg C ++Cp 
  KHJ33035.1 10 CKKSCPVVRSGRLCIEVTPDAKIA-FISE---------NLCIGCGICPKKCPF 52
                778888888877776666666555.3333.........458888888888885 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0042
      Fer4_8  5 CieCgaCqsaCpv 17
                Ci+Cg C ++Cp+
  KHJ33035.1 40 CIGCGICPKKCPF 52
                9**********95 PP

>> Fer4_17  4Fe-4S dicluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   9.2      0.26     1e+02      44      58 ..      38      52 ..       6      54 .. 0.83
   2 ?   10.0   2.2    0.0025      0.99       2      17 ..      40      55 ..      39      75 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.26
     Fer4_17 44 slCieCgeCerkCPq 58
                +lCi+Cg C +kCP 
  KHJ33035.1 38 NLCIGCGICPKKCPF 52
                789999999999995 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.0025
     Fer4_17  2 CiqCgyClpeCpsyea 17
                Ci+Cg C ++Cp++++
  KHJ33035.1 40 CIGCGICPKKCPFGAI 55
                7777777777776555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       553  (0.0308439); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                       112  (0.00624686); expected 17.9 (0.001)
Passed Fwd filter:                        47  (0.00262145); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              45  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 4161.16
//
Query:       KHJ33036.1  [L=595]
Description: hypothetical protein EV44_g6272 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-84  283.4   2.2    4.5e-84  282.5   2.2    1.4  1  Trs65     TRAPP trafficking subunit Trs65


Domain annotation for each model (and alignments):
>> Trs65  TRAPP trafficking subunit Trs65
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  282.5   2.2   2.5e-88   4.5e-84       1     316 []     283     586 ..     283     586 .. 0.92

  Alignments for each domain:
  == domain 1  score: 282.5 bits;  conditional E-value: 2.5e-88
       Trs65   1 tpffdcevvlekidlslkggtvedlnqkdglslPlscvahDhltllYkLapeeldvklesnsssksssrelsIsieakvlvspkctpkismsWtTsldf 99 
                 tpf++++v+++ i+l+l+gg vedln+k+glslP++ ++ D+l++++ L+ +e+d         k+s+++l+Isi+a+v++s+ c+ +i+m+W +sl f
  KHJ33036.1 283 TPFTEYDVTIQMIKLHLNGGRVEDLNNKSGLSLPVTSSPMDSLSFTFILSLNESD--------RKKSVQDLEISINASVNLSSVCQSNIKMNWIASLSF 373
                 79************************************************88776........89********************************** PP

       Trs65 100 tlpvnpgfgtpsqsssliqrshrpsqlsisgg..sassslsspsvsrpdalpsleasasrtretsspdlgitltfsgps..kkvkvGeefswkvfvvNr 194
                 t pvnpgf +p +s   i+r h+p+qlsi+    ++s   ++  + +  +l+s+ +s++++ + s++d+git+tf+++s  +++++G +f w+vf+ Nr
  KHJ33036.1 374 TSPVNPGFLAPPSS---IKRYHNPNQLSIDVDtpDSSLIGNTIPIIHSGTLTSVPRSITHELSDSVTDFGITVTFTSSStsSPIYPGIPFIWNVFILNR 469
                 *******9988777...***********887754444445566677888999***********************9988779***************** PP

       Trs65 195 sskerkLaLivipkrrrnevrvsrpssssassknkkdeevadavldenvvhamqksskvdsaevvcLsnDiRvGpLapgacyevelrflalreGvlsle 293
                 s++ rkLaLiv+pk+  +e rv  p  s++++   ++ eva+av+den ++ mqkss   + ev+cLs+   vGpL+p+ac+evel+f+al  G++++e
  KHJ33036.1 470 SDRFRKLALIVMPKNF-HEERVDSPHASTSKE---RRFEVAEAVVDENLIYVMQKSSCR-AVEVICLSTKQEVGPLSPMACHEVELKFMALDFGMIHVE 563
                 ************9988.777776666665555...7788*****************988.89************************************* PP

       Trs65 294 avrvvDlgsqehvdirelpevvv 316
                 avr+vDl+++ h+d+++lp+v++
  KHJ33036.1 564 AVRIVDLDTHTHIDVKDLPTVYI 586
                 ********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (595 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.22s 00:00:00.76 Elapsed: 00:00:00.38
# Mc/sec: 4665.86
//
Query:       KHJ33037.1  [L=770]
Description: putative formin binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-45  152.9  19.7    4.6e-15   55.5   0.8    6.7  6  FF               FF domain
    7.9e-17   61.1  16.4    1.2e-08   34.9   2.8    2.6  2  WW               WW domain
  ------ inclusion threshold ------
      0.011   15.9   0.1        1.8    8.7   0.1    3.1  2  Lipin_mid        Lipin/Ned1/Smp2 multi-domain protein middle 
      0.023   15.1   2.0      0.099   13.1   0.1    2.9  3  Phage_int_SAM_4  Phage integrase, N-terminal SAM-like domain
       0.11   13.1   6.9       0.38   11.5   0.1    4.2  4  RhoGAP-FF1       p190-A and -B Rho GAPs FF domain
       0.15   12.0   0.0       0.15   12.0   0.0    2.7  3  Ribosomal_L19    Ribosomal protein L19
       0.15   11.6   2.2        5.6    6.6   0.1    2.9  2  Lipid_DES        Sphingolipid Delta4-desaturase (DES)
        2.6    8.3   9.5        6.5    7.1   0.3    3.3  3  Glyco_hyd_101C   Glycosyl hydrolase 101 beta sandwich domain
        7.9    6.3   6.1         12    5.7   0.1    2.8  3  FdhE             Protein involved in formate dehydrogenase fo


Domain annotation for each model (and alignments):
>> FF  FF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.8   2.3e-18   4.6e-15       1      51 []     160     209 ..     160     209 .. 0.99
   2 !   43.5   1.1   1.3e-14   2.6e-11       1      51 []     227     277 ..     227     277 .. 0.98
   3 !    8.5   0.0    0.0012       2.3      16      51 .]     309     349 ..     297     349 .. 0.88
   4 !   45.5   0.0   3.2e-15   6.3e-12       2      50 ..     375     428 ..     374     429 .. 0.97
   5 ?    3.4   0.1     0.043        86       9      34 ..     447     473 ..     445     482 .. 0.86
   6 ?    5.2   0.1     0.012        24      21      50 ..     531     560 ..     515     561 .. 0.89

  Alignments for each domain:
  == domain 1  score: 55.5 bits;  conditional E-value: 2.3e-18
                 CCHHHHHHHHHHCSSS-TTSSHHHHHHHCTTSCCCHHGTSHHHHHHHHHHH CS
          FF   1 kareaFkeLLkehkeitpkstWseikkilenDpRYlalldkseReelFedy 51 
                 +a++aF++LL+ ++ ++p+s W+++++ +++Dp+Y+ l+d+++R+++Fe+y
  KHJ33037.1 160 EAEAAFMKLLRRNN-VDPDSNWEQTMRSIIKDPQYRSLKDPKDRKAAFEKY 209
                 79************.***********************************9 PP

  == domain 2  score: 43.5 bits;  conditional E-value: 1.3e-14
                 CCHHHHHHHHHHCSSS-TTSSHHHHHHHCTTSCCCHHGTSHHHHHHHHHHH CS
          FF   1 kareaFkeLLkehkeitpkstWseikkilenDpRYlalldkseReelFedy 51 
                 k r++F  +Lk+h ei+++++W+++++i+e +  ++   ++ eR++lFedy
  KHJ33037.1 227 KLRKDFALMLKSHPEIKHYTRWKTARPIIEGETIFRSSNNDDERRQLFEDY 277
                 5699**********************************************9 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0012
                 S-TTSSHHHHHHHCTTSCCC...HHG..TSHHHHHHHHHHH CS
          FF  16 itpkstWseikkilenDpRY...lal..ldkseReelFedy 51 
                 + p ++W e++ i+ +++R+   ++   l+ks+ + +Fe++
  KHJ33037.1 309 LQPFTRWTEAQGIITSNQRFqgdKKFqsLSKSDLLNAFENH 349
                 7899****************888777888999999999987 PP

  == domain 4  score: 45.5 bits;  conditional E-value: 3.2e-15
                 CHHHHHHHHHHCS...SS-TTSSHHHHHHHCTTSCCCHHG..TSHHHHHHHHHH CS
          FF   2 areaFkeLLkehk...eitpkstWseikkilenDpRYlal..ldkseReelFed 50 
                 +r+ F +LL+e+k    i + ++W +i++++++D+RY+++  +++s++++lF+d
  KHJ33037.1 375 NRDRFTALLQELKskkHIRAGTKWNQIYPLIKDDERYTVMlgQPGSTPLDLFWD 428
                 799**************************************************9 PP

  == domain 5  score: 3.4 bits;  conditional E-value: 0.043
                 HHHHCS.SS-TTSSHHHHHHHCTTSCC CS
          FF   9 LLkehk.eitpkstWseikkilenDpR 34 
                  L+++  e+++k++++e+++  ++D R
  KHJ33037.1 447 VLDDKRfEVESKTHFDEFLEWMKSDRR 473
                 58899999**********999888887 PP

  == domain 6  score: 5.2 bits;  conditional E-value: 0.012
                 SHHHHHHHCTTSCCCHHGTSHHHHHHHHHH CS
          FF  21 tWseikkilenDpRYlalldkseReelFed 50 
                 t+++i++++e  ++Y a+ +++ R+++Fe+
  KHJ33037.1 531 TYEKILPRIERIEEYNAVATDELRRSAFEK 560
                 789*************************97 PP

>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.9   2.8     6e-12   1.2e-08       4      31 .]      16      42 ..      13      42 .. 0.94
   2 !   31.3   5.8   7.8e-11   1.5e-07       4      31 .]      57      83 ..      55      83 .. 0.96

  Alignments for each domain:
  == domain 1  score: 34.9 bits;  conditional E-value: 6e-12
                TEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW  4 GWeeqwdpdsGrvYYyNheTgetqWekP 31
                 W e++ ++ GrvYYyN+ T++tqW+kP
  KHJ33037.1 16 LWNEARNAE-GRVYYYNTVTKVTQWTKP 42
                699******.*****************9 PP

  == domain 2  score: 31.3 bits;  conditional E-value: 7.8e-11
                TEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW  4 GWeeqwdpdsGrvYYyNheTgetqWekP 31
                +W+e++ +  Gr+Y+yN+eT++++We P
  KHJ33037.1 57 PWKEYTAEG-GRKYWYNTETKQSSWEMP 83
                8****9999.****************99 PP

>> Lipin_mid  Lipin/Ned1/Smp2 multi-domain protein middle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.1   0.00092       1.8      37      86 ..     227     284 ..     195     298 .. 0.74
   2 ?    8.5   0.1    0.0011       2.1      12      76 ..     264     336 ..     261     365 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00092
   Lipin_mid  37 slledpnLvvrin...dkYynwavaaplilsllvFqkplpeeavekllke.....kke 86 
                 +l +d  L+++ +   ++Y  w++a p+i    +F+ +  +++ ++l ++     +k+
  KHJ33037.1 227 KLRKDFALMLKSHpeiKHYTRWKTARPIIEGETIFRSSNNDDERRQLFEDyiielRKS 284
                 555666778888888899*********************9999999999877665333 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0011
   Lipin_mid  12 seneeiskekFeehlvtyedfcknpslledp....nLvvrin....dkYynwavaaplilsllvFqkplpeea 76 
                 s+n++++++ Fe+ +++  + ++++++ + +    +Lv  i     +++  w+ a  +i+s + Fq +   ++
  KHJ33037.1 264 SNNDDERRQLFEDYIIELRKSNAEQEITTRKtamnELVEIIRgldlQPFTRWTEAQGIITSNQRFQGDKKFQS 336
                 67889999*******************99998887677666677899******************96544444 PP

>> Phage_int_SAM_4  Phage integrase, N-terminal SAM-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       5.7   1.1e+04      20      40 ..      27      44 ..      24      50 .. 0.75
   2 ?   -0.5   0.0      0.92   1.8e+03       7      44 ..     279     318 ..     273     364 .. 0.72
   3 ?   13.1   0.1     5e-05     0.099      29      81 ..     444     492 ..     438     495 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 5.7
  Phage_int_SAM_4 20 ksYlsaikrflrflkkkapee 40
                      +Y+++++   +++k   pee
       KHJ33037.1 27 VYYYNTVTKVTQWTK---PEE 44
                     579999999999998...433 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.92
  Phage_int_SAM_4   7 ealrl..aglserTiksYlsaikrflrflkkkapeeltke 44 
                       +lr   a++  +T+k+ ++ + +++r l+ +++   t++
       KHJ33037.1 279 IELRKsnAEQEITTRKTAMNELVEIIRGLDLQPFTRWTEA 318
                      5554444667778888888888888887776666666554 PP

  == domain 3  score: 13.1 bits;  conditional E-value: 5e-05
  Phage_int_SAM_4  29 flrflkkkapeeltkedieaYlnyLanerklsastqknalnalsffykkvler 81 
                       l+ l+ k++e  +k+++ ++l+++  +r+    t++ +  als ++++++e+
       KHJ33037.1 444 VLDVLDDKRFEVESKTHFDEFLEWMKSDRR----TANIDQDALSLIFQRLVEK 492
                      5667888999999*************7777....9999999********9986 PP

>> RhoGAP-FF1  p190-A and -B Rho GAPs FF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   0.00019      0.38       9      69 ..     157     214 ..     154     227 .. 0.80
   2 ?    0.3   0.1       0.6   1.2e+03      11      73 ..     226     286 ..     210     292 .. 0.61
   3 ?   -0.8   0.1       1.3   2.5e+03      59      77 ..     344     362 ..     313     364 .. 0.79
   4 ?    1.5   0.1      0.25     5e+02      49      72 ..     546     569 ..     501     576 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00019
  RhoGAP-FF1   9 llesatdayekLirkqVtdyralWssvskklskekefeeyvelfGtekakklFrrhikkLk 69 
                 + e+a+ a++kL+r++  d ++ W+++++ + k +++++       ++ k  F+++  +++
  KHJ33037.1 157 TFEEAEAAFMKLLRRNNVDPDSNWEQTMRSIIKDPQYRSLK---DPKDRKAAFEKYAVEVR 214
                 57899******************************988654...45555666777776666 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.6
  RhoGAP-FF1  11 esatdayekLirkqV.tdyralWssvskklskekefeeyvelfGtekakklFrrhikkLkeehi 73 
                 e+  +++  +++++   ++ + W+++   ++ e+ f++       ++ ++lF+ +i +L++   
  KHJ33037.1 226 EKLRKDFALMLKSHPeIKHYTRWKTARPIIEGETIFRSS---NNDDERRQLFEDYIIELRKSNA 286
                 555555555555554234445566665555555555443...3356677888888888887655 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.3
  RhoGAP-FF1  59 klFrrhikkLkeehikkrr 77 
                 + F+ hik L + +   r+
  KHJ33037.1 344 NAFENHIKLLEKSFNDSRQ 362
                 7899999999988877775 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.25
  RhoGAP-FF1  49 velfGtekakklFrrhikkLkeeh 72 
                   +   e  ++ F++ ik+Lke+ 
  KHJ33037.1 546 NAVATDELRRSAFEKVIKRLKEKE 569
                 444445556778********9865 PP

>> Ribosomal_L19  Ribosomal protein L19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   7.3e-05      0.15      31      70 ..     264     303 ..     249     310 .. 0.90
   2 ?   -3.7   0.0       5.6   1.1e+04      66      84 ..     526     544 ..     519     557 .. 0.72
   3 ?   -2.6   1.0       2.6   5.3e+03      81     106 ..     655     681 ..     650     685 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 7.3e-05
  Ribosomal_L19  31 kegkkeRiqafeGvviarkgkgisetftvRkisegvgver 70 
                    ++++ eR q fe  +i+ +++++++++t Rk++ ++ ve 
     KHJ33037.1 264 SNNDDERRQLFEDYIIELRKSNAEQEITTRKTAMNELVEI 303
                    56789*****************************999995 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 5.6
  Ribosomal_L19  66 vgvervfplhspkiekiev 84 
                    v +e +++   p+ie+ie 
     KHJ33037.1 526 VRIEDTYEKILPRIERIEE 544
                    6688888888899998874 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 2.6
  Ribosomal_L19  81 kievvrrgkvrrakL.yYLrelkgkaa 106
                    +i++ r  + rr  L yY re++++++
     KHJ33037.1 655 EIDLDRPHRSRREALsYYDRERRERET 681
                    677788888888888577788887765 PP

>> Lipid_DES  Sphingolipid Delta4-desaturase (DES)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.1    0.0028       5.6      20      29 ..     234     243 ..     232     246 .. 0.90
   2 ?    3.4   0.3     0.028        56      11      20 ..     659     668 ..     657     669 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0028
   Lipid_DES  20 eILkkhPeik 29 
                  +Lk hPeik
  KHJ33037.1 234 LMLKSHPEIK 243
                 69*******9 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.028
   Lipid_DES  11 dePHasRRke 20 
                 d PH+sRR +
  KHJ33037.1 659 DRPHRSRREA 668
                 78******86 PP

>> Glyco_hyd_101C  Glycosyl hydrolase 101 beta sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.3    0.0033       6.5      77     102 ..      20      46 ..       3      55 .. 0.79
   2 ?    4.3   2.1     0.024        48      75     102 ..      60      87 ..      53      94 .. 0.82
   3 ?   -1.7   0.0       1.7   3.3e+03      30      71 ..     114     153 ..     103     185 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0033
                     -GGG-.EEEEEESS-SEEEEE--HHHH CS
  Glyco_hyd_101C  77 kadee.klYhynpkggtstwkLpekwa 102
                     ++++e ++Y+yn+    ++w+ pe++ 
      KHJ33037.1  20 ARNAEgRVYYYNTVTKVTQWTKPEELM 46 
                     344444***************999875 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.024
                     B--GGG-EEEEEESS-SEEEEE--HHHH CS
  Glyco_hyd_101C  75 kekadeeklYhynpkggtstwkLpekwa 102
                     + +a+  + Y+yn++  +s w++pe ++
      KHJ33037.1  60 EYTAEGGRKYWYNTETKQSSWEMPEVYK 87 
                     456667788***************9876 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1.7
                     EEEETTEE--EEEGGGG-EEEEETTEEEEETTEEEEEE-B-T CS
  Glyco_hyd_101C  30 tvkkaatvtkeeeeayrertitlngktvlkgesyLlPWnada 71 
                     t+  ++ +  ++e+ +++r+it+      +  +  +P n+d 
      KHJ33037.1 114 TT--SNEHLRDREPLTESRQITYGNDANGSRAQVFVPANTDP 153
                     33..34466777889999999998775555566667777666 PP

>> FdhE  Protein involved in formate dehydrogenase formation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.1    0.0058        12      54      97 ..     150     193 ..     138     236 .. 0.74
   2 ?    2.8   0.1     0.045        89      58     105 ..     349     396 ..     319     413 .. 0.80
   3 ?   -1.8   0.5       1.1   2.3e+03      57     125 ..     491     557 ..     432     575 .. 0.50

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0058
                 -..--HHHHHHHHHTT--TT-HHHHHHH-TTHHHHHHHHHT--S CS
        FdhE  54 plaldaeaieraqehgmpplaakalerdeawqelLqallealke 97 
                 ++ +d +++e+a+++ m++l +++++ d++w++++++++++ + 
  KHJ33037.1 150 NTDPDYNTFEEAEAAFMKLLRRNNVDPDSNWEQTMRSIIKDPQY 193
                 33478888999****************************94443 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.045
                 -HHHHHHHHHTT--TT-HHHHHHH-TTHHHHHHHHHT--S-SSHHHHH CS
        FdhE  58 daeaieraqehgmpplaakalerdeawqelLqallealkeelpealre 105
                 + + +e++ + + ++l+ ++++r+++ ++ ++all++lk++   ++ +
  KHJ33037.1 349 HIKLLEKSFNDSRQMLKIQKFRRERQNRDRFTALLQELKSKKHIRAGT 396
                 45556677888999**********************998876655555 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1.1
                 --HHHHHHHHHTT--TT-HHHHHHH-TTHHHHHHHHH.T--S-SSHHHHHHHHHHHH--HHHHHHHHHHH CS
        FdhE  57 ldaeaieraqehgmpplaakalerdeawqelLqalle.alkeelpealrealerlrkadaeelealadal 125
                 ++a++ ++ ++h+ + ++++a+   +a+++++++l      e++ e++   +er+++ +a + ++l ++ 
  KHJ33037.1 491 EKASRRKEDDKHQAERVQRRAV---DALRSYIKHLQPpVRIEDTYEKILPRIERIEEYNAVATDELRRSA 557
                 2333333333333333333333...344444444444322334444455555555555554444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (770 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1360  (0.0758548); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 5340.16
//
Query:       KHJ33038.1  [L=1524]
Description: putative chromodomain helicase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      6e-56  189.7   0.0    9.2e-56  189.0   0.0    1.4  1  SNF2_N      SNF2 family N-terminal domain
    6.6e-21   74.0   2.7      2e-14   53.2   0.4    3.0  2  Chromo      Chromo (CHRromatin Organisation MOdifier) domain
      3e-20   72.5   0.0    9.9e-20   70.8   0.0    1.9  1  DUF4208     Domain of unknown function (DUF4208)
    4.8e-19   68.7   0.0    1.4e-18   67.3   0.0    1.9  1  Helicase_C  Helicase conserved C-terminal domain
    5.8e-09   35.5   0.0    2.4e-08   33.5   0.0    2.0  1  HDA2-3      Class II histone deacetylase complex subunits 2 a
    1.4e-08   34.9   0.9    8.1e-08   32.4   0.0    2.8  3  ResIII      Type III restriction enzyme, res subunit
    1.7e-08   34.8  22.5    2.1e-08   34.5   0.4    5.3  4  Cdh1_DBD_1  Chromodomain helicase DNA-binding domain 1
  ------ inclusion threshold ------
      0.016   15.2   0.4       0.11   12.6   0.0    2.7  2  SLIDE       SLIDE
      0.089   13.0   0.1      0.089   13.0   0.1    3.4  4  CHDCT2      CHDCT2 (NUC038) domain
        5.3    7.0   5.3         14    5.7   5.3    1.7  1  DUF4192     Domain of unknown function (DUF4192)


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.0   0.0   5.2e-59   9.2e-56      52     350 .]     476     745 ..     359     745 .. 0.88

  Alignments for each domain:
  == domain 1  score: 189.0 bits;  conditional E-value: 5.2e-59
                 HHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH......---------- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxx RF
      SNF2_N  52 kqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkk......mkkkntkvap 144
                   ++++ iLaDemGLGKTvq+++++      +++++++       gp+L++vP +++  W ++++ + ++ +  ++ +++ ++      +        +
  KHJ33038.1 476 WTKNKNVILADEMGLGKTVQTVSFMN---WLRHDRHQE-------GPFLVIVPLTTIPAWADTFDYWSPDINYVIYNGKEASRsiireyE---LLSDGN 561
                 5677899*******************...555666654.......9*************************9888888877776553321...112222 PP

                 -------EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 145 klladydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdk 243
                     +++v++t+Y+++  +a      + l+q++w+++ +DE+h+lkn +s++++ ++++++  r+++tGTP+qn l +l +L++fL++++++     d 
  KHJ33038.1 562 VKKPKFNVLLTSYEYILADA------NFLSQIKWQFMAVDEAHRLKNRESQLYQKLLDFKAPSRLLITGTPVQNTLGELSALMDFLMPGVLD--IEEDM 652
                 2345789**********999......8****************************************************************9..45566 PP

                 HTHHHHHHHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HH.H-HHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx RF
      SNF2_N 244 llqrpieaqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalksssksk.ekilelllelr 341
                  l+++++    ++++ L + +q+++lrr+k++ve +lPpk+e+ii+++ls+v++ +Y+             +l+r+ aal+++ + + + +l++++el+
  KHJ33038.1 653 DLTEEAA---GEKIAALTNKIQPYILRRTKQKVENDLPPKSEKIIRVELSDVQLDYYK------------NILTRNYAALNEGANGQkQSLLNIMMELK 736
                 6777777...8999********************************************............89999999999999999777********* PP

                 HHHH---XX CS
                 xxxxxxxxx RF
      SNF2_N 342 qacnhpqlv 350
                 +a nhp+++
  KHJ33038.1 737 KASNHPYMF 745
                 ******985 PP

>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.1   3.3e-07   0.00059       7      42 ..     292     325 ..     277     338 .. 0.70
   2 !   53.2   0.4   1.1e-17     2e-14       2      54 .]     376     426 ..     375     426 .. 0.97

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 3.3e-07
                 EEEEEETTEECEEEEEEETTSTGGGTEEEEGGGCSS CS
      Chromo   7 idhrtdkdgleleYlVKWkglpysentWEpeenlek 42 
                  ++   +d    eY++KW++ ++ ++tWE+ + l+ 
  KHJ33038.1 292 EAEDLTRDDF--EYFIKWQDKSHYHATWETFTSLAG 325
                 3444444555..*****************9777665 PP

  == domain 2  score: 53.2 bits;  conditional E-value: 1.1e-17
                 EEEEEEEEEEETTEECEEEEEEETTSTGGGTEEEEGGGCSSHSHHHHHHHHHH CS
      Chromo   2 eVerIidhrtdkdgleleYlVKWkglpysentWEpeenlekcfqelideFkkr 54 
                 +V+r+i++r ++++   eY+VKWk l y+++tWEp++++++ +q++id++ +r
  KHJ33038.1 376 KVDRVIGSRDNEGEI--EYFVKWKALYYESCTWEPASLISEISQDAIDRYLDR 426
                 7**************..*********************************997 PP

>> DUF4208  Domain of unknown function (DUF4208)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.8   0.0   5.5e-23   9.9e-20       3      96 .]    1407    1499 ..    1404    1499 .. 0.92

  Alignments for each domain:
  == domain 1  score: 70.8 bits;  conditional E-value: 5.5e-23
     DUF4208    3 desmdeeeckellrpvkksLkrLkkltkekllskkerakilkkeLlkiGdfIdellkekkeekkeklkkhlWefvskfwpkk..vsgkkLeemYkk 96  
                  +++ ++ +++ ll+p+k+sLkrL+ +t+ +++s+kera+++k eL++iG+fI++l++e   e+ ++l++++We+v   wp     s ++L  mY+k
  KHJ33038.1 1407 SSKPNDPMMRLLLKPIKDSLKRLQAATTINIKSQKERANVMKIELVTIGNFIETLAQE---EEGAALRQSFWEYVVGLWPVApsPSWSQLDGMYHK 1499
                  45567779************************************************99...6999***************5557999*******97 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.3   0.0   7.7e-22   1.4e-18       4     111 .]     774     885 ..     771     885 .. 0.89

  Alignments for each domain:
  == domain 1  score: 67.3 bits;  conditional E-value: 7.7e-22
                 HHHHHHH.HHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH...TTSSSEEEESGGGTSSSTSTTESEEEESSSSSSH CS
  Helicase_C   4 eallell.kleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfn...kgesdvLiatdvaerGidipkvnlVinfdlprnv 97 
                   l +ll kl+++++++lif++ +++l+   ++l + +g+++ +l+g++ +  r+ +++ fn   ++++ +L++t++++ Gi++  +++Vi+fd ++n+
  KHJ33038.1 774 MLLDRLLtKLKRDKHRVLIFSQMVKMLDIlGDYL-QLRGYQFQRLDGTIAAGPRRMAIDHFNaegSNDFCFLLSTRAGGLGINLMTADTVIIFDSDWNP 871
                 5667777899*****************8855555.7779***********************844455559**************************** PP

                 HHHHHHHTTSSSTT CS
  Helicase_C  98 tsyiqriGRtgRag 111
                 +   q++ R++R+g
  KHJ33038.1 872 QADLQAMARAHRIG 885
                 ************97 PP

>> HDA2-3  Class II histone deacetylase complex subunits 2 and 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.0   1.3e-11   2.4e-08      10     247 ..     696     909 ..     689     927 .. 0.77

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 1.3e-11
                 E---HHHHHHHHHHHHHTHHHHHHHHHSTTT--HHHH.HHHHHHHH.HHHHHHH-GGGT..--TT--S-S-.STTHHHHHHHT-HHHHHHHHHHHHHTT CS
      HDA2-3  10 tpltelqkelteqivslhyedllkyvetsdsqeklslsikslticlenlslvanHPsLL..vdHympkkll.lkelpeklaetSgKFkvlndlvnliie 105
                 + l+++q + ++ i++  y  l +  +   ++      +++l+i++ +l+  +nHP++   ++  + k +  +++  + l+ +SgK+ +l +l+  +  
  KHJ33038.1 696 VELSDVQLDYYKNILTRNYAALNEGANG--QK------QSLLNIMM-ELKKASNHPYMFpnAEEKILKGSErREDQLKGLIASSGKMMLLDRLLTKLKR 785
                 5677777777777777777777665522..12......45689999.89*********62244444444441455567799****************** PP

                 SS....EEEEEEE-STHHHHHHHHHHTTSSSEEEESSS--S--S---S-..................-SEEEEEEESS---TTTS--TT-S-EEEEEE- CS
      HDA2-3 106 rkrksslnvlvvakskkeldLiEalllGkklkikrysgeklydekkkkskdtkknsrktkeklkkkihsltihllsttrqltkdksllenikfdliiaf 204
                 +k      vl+ ++ +k ld++  +l+ ++ +++r++g+   +  +              ++++ + +  ++ +l +tr         + + +d +i f
  KHJ33038.1 786 DK----HRVLIFSQMVKMLDILGDYLQLRGYQFQRLDGTIAAGPRRMAI-----------DHFNAEGS-NDFCFLLSTRAGGLG---INLMTADTVIIF 865
                 **....99*******************************9999999888...........33444444.556666666665443...566678****** PP

                 SST--TTSHHHHHHH---.-------EEEEEETTSHHHHHHHHT CS
      HDA2-3 205 Dssvdtsspsveslrtqn.rkknklpiirlvpinSieHvkLcfk 247
                 Ds+ +++ +   + r ++  +k+++ i+rlv+ +++e   L++ 
  KHJ33038.1 866 DSDWNPQADLQAMARAHRiGQKKPVSIYRLVSKETVEEEVLERA 909
                 *********999999987244556*************9888877 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.0   4.5e-11   8.1e-08       3     169 ..     460     626 ..     424     628 .. 0.82
   2 ?   -3.2   0.0         4   7.2e+03       7      22 ..     723     748 ..     719     793 .. 0.59
   3 ?   -2.3   0.5       2.2     4e+03      97     133 ..    1052    1088 ..    1019    1111 .. 0.69

  Alignments for each domain:
  == domain 1  score: 32.4 bits;  conditional E-value: 4.5e-11
                 EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.... CS
      ResIII   3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee.kflflvprkslleqtleefkkflseaykeigkkvsgdkkka.... 96 
                 +lr+ Q++ ++ l+ ++  +++k+++++ + G GKT+  ++++  l++ +++e  fl++vp +++   + ++f  ++++ +     +++g++ ++    
  KHJ33038.1 460 QLRDFQITGLNFLAYNW--TKNKNVILADEMGLGKTVQTVSFMNWLRHDRHQEgPFLVIVPLTTIP-AWADTFDYWSPDINYV---IYNGKEASRsiir 552
                 56777777777777676..699*********************99999999999*******99986.5889998777776443...3333333333334 PP

                 ..............-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.T..TTHHHHHT---SEEEEEESS- CS
      ResIII  97 .......kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakk..swreilekfkeavllglTATp 169
                         + ++ + ++l+t+++ + ad        + l++ + +++ +DEaHrl+  +   ++++l+  k+  +l +T+Tp
  KHJ33038.1 553 eyellsdGNVKKPKFNVLLTSYEYILADA-------NFLSQIKWQFMAVDEAHRLKNREsqLYQKLLDF-KAPSRLLITGTP 626
                 56665566667889***************.......7888888999**********9844499998877.99999999***9 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 4
                 HHHHHHHHHT................ CS
      ResIII   7 yQeeaienlleklks..........k 22 
                  Q++ + n++ +lk+           
  KHJ33038.1 723 GQKQSLLNIMMELKKasnhpymfpnA 748
                 68888888888887744444444440 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 2.2
                  .......-SEEEEEHHHHHHTH........HHHTTT- CS
      ResIII   97 kekdstnkkilvttiqsldadseeeeeeseellrdrf 133 
                   +k++ ++   ++ +q+l +++e+++ +++el+++r+
  KHJ33038.1 1052 PRKAAMKNTAEIEREQRLFKKRERDQAKQDELDEKRE 1088
                  3457777888889999999999777666666665554 PP

>> Cdh1_DBD_1  Chromodomain helicase DNA-binding domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.8       1.5   2.7e+03      56      99 ..     172     215 ..     162     228 .. 0.77
   2 ?   -3.1   3.8       5.4   9.7e+03      55      94 ..    1030    1068 ..    1013    1094 .. 0.55
   3 !   34.5   0.4   1.2e-11   2.1e-08       1      64 [.    1100    1163 ..    1100    1171 .. 0.92
   4 !   13.3   0.3   4.5e-05      0.08     102     120 .]    1173    1191 ..    1164    1191 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.5
  Cdh1_DBD_1  56 keeeekrakeleeleadaeeykeklkkgevkadeekkdtpitkl 99 
                 k++ ++r+++ ++le+++++   ++++++++  + ++ +++ k 
  KHJ33038.1 172 KRRRQERSQQSSQLETQVNRSVSESESNSDTYGGLRARNTMKKH 215
                 66778889999999999999998888888887777766666654 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 5.4
  Cdh1_DBD_1   55 vkeeeekrakeleeleadaeeykeklkkgevkadeekkdt 94  
                  +k eee+ra+e e l++ +ee++ + ++ +++a+ e++++
  KHJ33038.1 1030 IKAEEERRAHE-EYLAKVVEENAPRKAAMKNTAEIEREQR 1068
                  55566665554.3444444444444444444444433322 PP

  == domain 3  score: 34.5 bits;  conditional E-value: 1.2e-11
  Cdh1_DBD_1    1 ltEreiRalYkaiLkyGdlsnkleeliadGtLPeknielleelyeelleeakklvkeeeekrak 64  
                  l+E+e R+l++a L++G ++++ +eli+d  L  ++i ll++  + +++e+++ +ke+ ++ + 
  KHJ33038.1 1100 LNEKEARNLFRAFLRFGSIEERQDELIKDARLVGRDIGLLRDTIQAIIDESSRRLKEDAARIEA 1163
                  79*****************************************************998776654 PP

  == domain 4  score: 13.3 bits;  conditional E-value: 4.5e-05
  Cdh1_DBD_1  102 krrekkAiLFeykgvknlN 120 
                   +++kkA+LF++ gvk lN
  KHJ33038.1 1173 TKKDKKAVLFDFLGVKRLN 1191
                  689**************99 PP

>> SLIDE  SLIDE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   1.4       9.4   1.7e+04      12      31 ..    1071    1090 ..    1057    1105 .. 0.53
   2 ?   12.6   0.0     6e-05      0.11      20      78 ..    1201    1259 ..    1191    1261 .. 0.76

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 9.4
       SLIDE   12 kkieklkelkellkkkveqy 31  
                  kk+e+ + +++ l++k e++
  KHJ33038.1 1071 KKRERDQAKQDELDEKREAL 1090
                  33444444444444444333 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 6e-05
       SLIDE   20 lkellkkkveqyknplqelkikyppsnkg.kkeyteeeDrfllvllakyGygnyekikke 78  
                   +++l+ ++ ++++ ++++++  ++++++  +e+   eD +ll+ ++++Gyg++ +i+++
  KHJ33038.1 1201 EMRMLRDIITSISD-FRNFRVPDASKAANyTCEWGAREDGMLLIGIHRHGYGAWVQIRDD 1259
                  56677777777554.777777666444443567999*********************975 PP

>> CHDCT2  CHDCT2 (NUC038) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.4         9   1.6e+04      83     104 ..     179     200 ..     162     233 .. 0.52
   2 ?   -2.6   0.1         3   5.3e+03      91     147 ..     733     791 ..     716     803 .. 0.61
   3 ?   -2.3   1.2       2.5   4.4e+03      83     149 ..    1098    1164 ..    1043    1174 .. 0.68
   4 ?   13.0   0.1     5e-05     0.089       5      45 ..    1233    1273 ..    1231    1345 .. 0.84

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 9
      CHDCT2  83 lqeekekvgslaqrfaelella 104
                 +q++++  ++++++++e e  +
  KHJ33038.1 179 SQQSSQLETQVNRSVSESESNS 200
                 2333333333333333333333 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 3
      CHDCT2  91 gslaqrfaelellaeshqkllkesaagnknanavle..kvLnqleelLsdmkadvsrlp 147
                 ++l++  ++  +  ++++k+lk s+  + + + +++    +  l+ lL+ +k d +r+ 
  KHJ33038.1 733 MELKKASNHPYMFPNAEEKILKGSERREDQLKGLIAssGKMMLLDRLLTKLKRDKHRVL 791
                 55555555555555566666665555444444433322345678999999999998864 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 2.5
      CHDCT2   83 lqeekekvgslaqrfaelellaeshqkllkesaagnknanavlekvLnqleelLsdmkadvsrlpat 149 
                   + +++++ +l + f     + e + +l+k+++   +    +  ++   ++e    +k+d +r+ a+
  KHJ33038.1 1098 RELNEKEARNLFRAFLRFGSIEERQDELIKDARLVGRDIGLLRDTIQAIIDESSRRLKEDAARIEAM 1164
                  2334556677777888888888888888888888888888888888888888888888888888775 PP

  == domain 4  score: 13.0 bits;  conditional E-value: 5e-05
      CHDCT2    5 WhRrHDyWllagvvlhGyaRwqDiqndprfaiinepFksea 45  
                  W  r D  ll+g+  hGy+ w  i +dp + + +  F +e+
  KHJ33038.1 1233 WGAREDGMLLIGIHRHGYGAWVQIRDDPDLGLGDKFFLEEH 1273
                  8899999*********************9886555555554 PP

>> DUF4192  Domain of unknown function (DUF4192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   5.3    0.0076        14     139     228 ..    1027    1109 ..    1020    1173 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0076
     DUF4192  139 laGrvvegsReelearlapvegaaaraaqrraaeraaaaleralarprdaerrsdpaevrraaleavraalarvaagaglsdaeeaarla 228 
                  laG  +e +R++ e++la v  +   +a r+aa + +a++er ++ ++++e    ++++ ++ l++ r+al ++++ ++  +++ea +l 
  KHJ33038.1 1027 LAGIKAEEERRAHEEYLAKVVEE---NAPRKAAMKNTAEIEREQRLFKKRE----RDQAKQDELDEKREALSNRDDPKRELNEKEARNLF 1109
                  79****************98554...3445555666666666655555543....47888899999999999998877766665776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1524 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1370  (0.0764125); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.00u 0.31s 00:00:01.31 Elapsed: 00:00:00.47
# Mc/sec: 9683.89
//
Query:       KHJ33039.1  [L=281]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1984.26
//
Query:       KHJ33040.1  [L=1094]
Description: putative nonsense transcript [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-70  235.4   0.5    5.4e-70  234.3   0.3    1.7  2  UPF1_Zn_bind     RNA helicase (UPF2 interacting domain)
    3.3e-60  203.1   0.0    6.6e-60  202.1   0.0    1.5  2  AAA_12           AAA domain
    2.4e-53  181.6   3.3    2.1e-30  106.4   0.4    2.3  2  AAA_11           AAA domain
    1.5e-31  108.5   0.0    2.9e-31  107.6   0.0    1.5  1  DUF5599          Domain of unknown function (DUF5599)
    6.7e-14   52.1   0.6    6.6e-13   48.8   0.6    2.3  1  AAA_30           AAA domain
    8.9e-11   42.3   0.1    5.2e-10   39.8   0.1    2.3  2  AAA_19           AAA domain
      4e-05   23.5   0.2       0.18   11.5   0.0    2.9  3  Viral_helicase1  Viral (Superfamily 1) RNA helicase
    5.2e-05   23.3   0.0    9.4e-05   22.5   0.0    1.4  1  ResIII           Type III restriction enzyme, res subunit
    0.00056   19.3   0.1      0.013   14.7   0.0    2.3  2  DUF2075          Uncharacterized conserved protein (DUF2075)
    0.00079   19.3   0.0     0.0015   18.4   0.0    1.5  1  Helicase_RecD    Helicase
      0.004   16.4   0.0       0.37    9.9   0.0    2.2  2  PIF1             PIF1-like helicase
     0.0051   16.4   0.0      0.037   13.6   0.0    2.0  2  UvrD-helicase    UvrD/REP helicase N-terminal domain
     0.0074   15.2   0.0      0.012   14.5   0.0    1.2  1  AAA_10           AAA-like domain
     0.0091   15.8   0.0      0.018   14.8   0.0    1.4  1  DEAD             DEAD/DEAH box helicase
  ------ inclusion threshold ------
      0.012   15.0   0.0      0.021   14.2   0.0    1.3  1  ATPase           KaiC
      0.034   14.4   0.0      0.091   13.0   0.0    1.7  1  AAA_22           AAA domain
       0.17   12.0   0.0       0.44   10.6   0.0    1.7  1  Ribosomal_S13_N  Ribosomal S13/S15 N-terminal domain
       0.17   11.5   0.0       0.35   10.5   0.0    1.5  1  SRP54            SRP54-type protein, GTPase domain


Domain annotation for each model (and alignments):
>> UPF1_Zn_bind  RNA helicase (UPF2 interacting domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  234.3   0.3   5.4e-73   5.4e-70       1     152 []      96     247 ..      96     247 .. 1.00
   2 ?   -3.2   0.0       7.6   7.5e+03      29      51 ..     477     500 ..     475     511 .. 0.69

  Alignments for each domain:
  == domain 1  score: 234.3 bits;  conditional E-value: 5.4e-73
  UPF1_Zn_bind   1 haCaYCgisdpesvvkCaackkwFCngkgktsashivthlvrskhkevslhkesplgdtvleCyncgsknvflLgfipaksesvvvllcrepcasak 97 
                   haCaYCgi++p+svvkC  c+kwFC ++g++++shiv+hlvr++hkev+lh+ s+lgdtvleCyncg+knvflLgfipaks++vvvllcr+pcas+ 
    KHJ33040.1  96 HACAYCGIHSPSSVVKCLGCNKWFCSARGNATSSHIVNHLVRARHKEVQLHPLSTLGDTVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCASTP 192
                   9************************************************************************************************ PP

  UPF1_Zn_bind  98 slkdlnwdlsewqpliedrqllswlvkvpseeeqlrarkisakqiekleelwkkn 152
                   s+kd++wd+s+wqpliedr++l+wl++vp+++eqlrar+++   i+klee+wk+n
    KHJ33040.1 193 SSKDMSWDISRWQPLIEDRSFLPWLLSVPTDAEQLRARHLTPPMIAKLEEMWKDN 247
                   *****************************************************87 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 7.6
  UPF1_Zn_bind  29 gkt.sashivthlvrskhkevslh 51 
                   gkt +++ +++hl + +  +v + 
    KHJ33040.1 477 GKTvTSATVIYHLAKVNGGQVLVC 500
                   455477889999998887777655 PP

>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       8.8   8.8e+03      19      35 ..     540     556 ..     532     588 .. 0.58
   2 !  202.1   0.0   6.7e-63   6.6e-60       1     198 [.     660     856 ..     660     857 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 8.8
      AAA_12  19 lLdtqYRmhpeIsrfps 35 
                  L++q Rm+++ +++ +
  KHJ33040.1 540 SLHEQVRMNDSNVELMK 556
                 56777777765444443 PP

  == domain 2  score: 202.1 bits;  conditional E-value: 6.7e-63
      AAA_12   1 lerSlferllkkekekvvlLdtqYRmhpeIsrfpsklfYkgkLkdaesvkkrele.aqealeepleplvfidvekseeekekkeksyiNeeEaelvvkl 98 
                 l++Slferl+  e  +++ L++qYRmhp +s+fps++fY+g+L+++ ++++r  + ++  ++   +p++f++  ++ee + +  +sy N++Ea+ v k+
  KHJ33040.1 660 LNQSLFERLVMLE-MHPIRLNIQYRMHPCLSEFPSNMFYEGTLQNGVTMQERLRDeVDFPWPVGDTPMMFWSNLGNEEISASG-TSYLNRTEASNVEKI 756
                 589**********.99**********************************999885667788889999999988888888765.*************** PP

      AAA_12  99 vekllkkgseeerkkigvitpYraqvellkkklkek..eeeksekeievntvdgfQGrekdviilslVRsnekkeigflkderrlNValTRAkskliiv 195
                 v++++k+g++    +igvitpY+ q +++ + ++++  +++++++eiev++vd+fQGrekd+i+ls+VRsn+++ igfl+d rrlNValTRAk+ l+i+
  KHJ33040.1 757 VTRFFKAGVQP--ADIGVITPYEGQRSYVVSSMQNTgtFKKENYREIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 853
                 **********9..9***************99999761145555566***************************************************** PP

      AAA_12 196 Gnk 198
                 Gn+
  KHJ33040.1 854 GNP 856
                 *97 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.7   0.3   2.5e-24   2.5e-21       2     120 ..     451     552 ..     450     560 .. 0.92
   2 !  106.4   0.4   2.1e-33   2.1e-30     159     261 .]     553     653 ..     548     653 .. 0.94

  Alignments for each domain:
  == domain 1  score: 76.7 bits;  conditional E-value: 2.5e-24
      AAA_11   2 lndsqreaiksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCapSNaAvDellerllrglldsegekykpkivRvgnee.er 99 
                 ln sq  a++s+l+++  +liqGPPGtgKT t + ++ +l        +k ++ ++LvCapSN+AvD+l+er+ r         +++k+vR+ +++ e+
  KHJ33040.1 451 LNGSQISAVRSVLQKPL-SLIQGPPGTGKTVTSATVIYHL--------AKVNGGQVLVCAPSNVAVDQLCERIHR---------TGLKVVRLTAKSrED 531
                 899*************6.**********************........689************************.........************999 PP

      AAA_11 100 iseavksvsleekvekrleke 120
                 ++++v+ +sl e+v+ + ++ 
  KHJ33040.1 532 VESSVSFLSLHEQVRMNDSNV 552
                 *************99887665 PP

  == domain 2  score: 106.4 bits;  conditional E-value: 2.1e-33
      AAA_11 159 skskleqerrklkkerkelskeleeaeesleeevldeaeivltTlsgagsklleklakkfdvviIDEAaqavEpstliPlrlgakkvvLvGDpkQLpat 257
                 +  kl q +++l + +++ +k+++  ++++e+e+l++a+++++T++gag ++l k+  kf++v+IDE +q+ Ep+++iPl lg+k+vvLvGD++QL ++
  KHJ33040.1 553 ELMKLAQLKTELGELSSQDEKKFKALTRAAEREILTNADVICCTCVGAGDPRLAKM--KFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPV 649
                 56678888999999999999************************************..9**************************************** PP

      AAA_11 258 visk 261
                 +++k
  KHJ33040.1 650 IMNK 653
                 9975 PP

>> DUF5599  Domain of unknown function (DUF5599)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.6   0.0   2.9e-34   2.9e-31       1      93 []     300     394 ..     300     394 .. 0.97

  Alignments for each domain:
  == domain 1  score: 107.6 bits;  conditional E-value: 2.9e-34
     DUF5599   1 qtqddisvrWdvglnkkrlasFvlpkldsgelrlvvGDelrlkykgseaeeWegeghvvkltdssseevtleLrss..skkaPtevttgFtvefV 93 
                 q++d++ +rWd+gln+k+lasFvlpk + g+++l+vGDe+rlkykg+++  Weg+g+vvk+++++s+evt+eLr+   +k++Pte+t++F+++++
  KHJ33040.1 300 QSEDGLVIRWDYGLNNKHLASFVLPKIELGDVKLAVGDEMRLKYKGEMRPIWEGVGYVVKIPNNQSDEVTIELRKVgsDKSVPTECTHNFSADYI 394
                 899***********************************************************************8876888***********986 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.6   6.6e-16   6.6e-13       1     131 [.     450     649 ..     450     662 .. 0.83

  Alignments for each domain:
  == domain 1  score: 48.8 bits;  conditional E-value: 6.6e-16
      AAA_30   1 elnaeQaaavealltsgdrvavltGpAGtGKttalkalreaweaa.ggrviglAptgkaAkvLaeelgieastiakllkrlk................. 81 
                 eln +Q +av+++l+++  +++++Gp+GtGKt + +++  ++++  gg+v+++Ap++ a ++L e +  ++  + +l+ + +                 
  KHJ33040.1 450 ELNGSQISAVRSVLQKP--LSLIQGPPGTGKTVTSATVIYHLAKVnGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSRedvessvsflslheqvr 546
                 5899*************..9************99999966666666******************97777777777777666677777777888888888 PP

      AAA_30  82 ........................................................grarlepg.tllivDEagmvdtkq.laallkaaekagakvilv 122
                                                                              + + + +++DE+   +  + +  l+  ++    +v+lv
  KHJ33040.1 547 mndsnvelmklaqlktelgelssqdekkfkaltraaereiltnadvicctcvgagdP-RLAKMKfRTVLIDESTQSAEPEcMIPLVLGCK----QVVLV 640
                 8888888888888888888***********************************863.23334469999***998766651444544444....6**** PP

      AAA_30 123 GDerQlasV 131
                 GD++Ql++V
  KHJ33040.1 641 GDHQQLGPV 649
                 *******99 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       5.1   5.1e+03      99     123 ..     404     427 ..     381     435 .. 0.74
   2 !   39.8   0.1   5.2e-13   5.2e-10       1     143 [.     455     648 ..     455     650 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 5.1
      AAA_19  99 klqeeellivDEfqdvdelqyrLlk 123
                 +l + +++ vDE++       +Ll 
  KHJ33040.1 404 QL-AMKTFAVDEMSVSGYIFHKLLG 427
                 34.556999***9988788888875 PP

  == domain 2  score: 39.8 bits;  conditional E-value: 5.2e-13
      AAA_19   1 qreave.alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgae.................atTiHrlal.... 77 
                 q +av+  l++++ l+ ++pGtGKT +  +++ +l +++g    ++l++a+ + A+++l er++  g++                         l    
  KHJ33040.1 455 QISAVRsVLQKPLSLIQGPPGTGKTVTSATVIYHLAKVNGG---QVLVCAPSNVAVDQLCERIHRTGLKvvrltaksredvessvsF-------Lslhe 543
                 66899889999**************************9975...9******************888888766666666666555552.......04455 PP

      AAA_19  78 ..................................ldfddlltealelle.....................eaeeekklqeee.llivDEfqdvd..elq 118
                                                   l                                      + +  + ++ ++++DE+ +    e +
  KHJ33040.1 544 qvrmndsnvelmklaqlktelgelssqdekkfkaL-------------TraaereiltnadvicctcvgaG--DPRLAKMKFrTVLIDESTQSAepECM 627
                 55566666666666666666666555555444330.............23444455556666667776441..2333334557******8766535555 PP

      AAA_19 119 yrLlkallgekkklllvGDpdQliy 143
                   L+  ++    +++lvGD++Ql +
  KHJ33040.1 628 IPLVLGCK----QVVLVGDHQQLGP 648
                 55554444....6*********865 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0         2     2e+03       2      13 ..     469     480 ..     468     534 .. 0.79
   2 !   11.5   0.0   0.00018      0.18      32     117 ..     575     663 ..     554     690 .. 0.69
   3 !    8.7   0.0    0.0013       1.3     172     233 ..     789     853 ..     738     854 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2
  Viral_helicase1   2 vvhGvpGcGKSt 13 
                      +++G pG GK+ 
       KHJ33040.1 469 LIQGPPGTGKTV 480
                      79999*****94 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00018
  Viral_helicase1  32 aelltegk....pklpnlsvrtvdsflmalvkstkgkililDEylll..haGyilllaalskaklvilfGDplQipfhsrnasfllahlpss 117
                      +++lt+++      + +  + t+  +  ++++++k++++++DE ++   + ++i l     ++k+v+l+GD++Q +    n+++  a l+ s
       KHJ33040.1 575 FKALTRAAereiLTNADVICCTCVGAGDPRLAKMKFRTVLIDESTQSaePECMIPL---VLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 663
                      55555555443333333344455555566667789*********997224566655...79*************887666665555555555 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.0013
  Viral_helicase1 172 ftqalkealgvr....evttvhevqGltfd..kVtlvllketdlelisesrenllvAlTRhrkslvil 233
                       t   k++   +    ev  v   qG + d  + ++v++++ +   + +++  l vAlTR++ +lvil
       KHJ33040.1 789 NTGTFKKE---NyreiEVASVDAFQGREKDfiVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 853
                      33333333...233588999******997722445566655554445589***************997 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   9.5e-08   9.4e-05       7      83 ..     454     523 ..     449     623 .. 0.67

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 9.5e-08
                 HHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG... CS
      ResIII   7 yQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseayk 83 
                  Q++a++++l      ++   li+ + GtGKT+++a +i++l+k ++  ++l+ +p++  ++q+ e++ ++  + + 
  KHJ33040.1 454 SQISAVRSVL------QKPLSLIQGPPGTGKTVTSATVIYHLAKVNG-GQVLVCAPSNVAVDQLCERIHRTGLKVVR 523
                 5666666666......345679*********************9766.5**************99999665555443 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   1.3e-05     0.013       3      75 ..     467     540 ..     465     595 .. 0.74
   2 ?    2.0   0.0     0.099        98     345     359 ..     838     852 ..     823     855 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.3e-05
     DUF2075   3 vvlVtGvaGtGKtvvllnllaeleddeeertavylsvNhplvlvlrealakke.....ekkkkkeafeklssfinnls 75 
                 + l++G +GtGKtv   ++++ l  + ++ ++ +   ++  v+ l e++ ++         k +e++e + sf   ls
  KHJ33040.1 467 LSLIQGPPGTGKTVTSATVIYHL-AKVNGGQVLVCAPSNVAVDQLCERIHRTGlkvvrLTAKSREDVESSVSF---LS 540
                 569********************.7778888888888888999999999998877444344444444444444...33 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.099
     DUF2075 345 ayrVLLtRGrkGlyi 359
                 +++V LtR+ +Gl+i
  KHJ33040.1 838 RLNVALTRAKYGLVI 852
                 79************9 PP

>> Helicase_RecD  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   1.5e-06    0.0015       2      62 ..     470     531 ..     469     572 .. 0.75

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1.5e-06
  Helicase_RecD   2 ltAdRGRGKSaalGlalaaliaegksnilvtapskenvktlfeflak.glealglkeeekkk 62 
                    +++ +G+GK+ + + ++ +l++ +  ++lv+aps+ +v++l e++++ gl+ ++l+ +++++
     KHJ33040.1 470 IQGPPGTGKTVTSATVIYHLAKVNGGQVLVCAPSNVAVDQLCERIHRtGLKVVRLTAKSRED 531
                    7899***************************************9965256666665533322 PP

>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.021        21      26      66 ..     469     510 ..     451     592 .. 0.84
   2 !    9.9   0.0   0.00037      0.37     137     173 ..     630     663 ..     607     687 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.021
                 EEEESTTSSCHHHHHHHHHHCHC.TCCCEEEEESSHHHHHCC CS
        PIF1  26 FvtGsgGtgKtflwkallkklrs.egkivlavAssGvAalll 66 
                  ++G  GtgKt    +++  l + +g +vl+ A s vA  +l
  KHJ33040.1 469 LIQGPPGTGKTVTSATVIYHLAKvNGGQVLVCAPSNVAVDQL 510
                 579**********99988777655999*********998766 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00037
                 SCCCC-EEEEE--TTS-----SSSSS---BGC...CS CS
        PIF1 137 kpFGGktvvlgGDfrQilPviekgsraeivaasikeS 173
                    G k+vvl GD +Q+ Pvi + +     +a +++S
  KHJ33040.1 630 LVLGCKQVVLVGDHQQLGPVIMNKKA---AKAGLNQS 663
                 56799****************55433...33334444 PP

>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   3.7e-05     0.037       2      68 ..     452     538 ..     451     592 .. 0.71
   2 ?    0.2   0.0      0.44   4.4e+02     255     294 ..     608     645 ..     603     646 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.7e-05
                    SHHHHHHHHS.-SSEE.EEEE-TTSSHHHHHHHHHHHHHHTSSSTGGGEEEEESSHHHHHHHHHHHHH.....................H CS
  UvrD-helicase   2 npeqreaias.lggpi.lveAsAGsGKTfvlaerilrlikeeeiepdrilvvTFTnkAaeElkeRiee.....................a 68 
                    n +q +a++s l++p+ l+   +G+GKT + a +i +l k    +  ++lv    n A + l eRi++                      
     KHJ33040.1 452 NGSQISAVRSvLQKPLsLIQGPPGTGKTVTSATVIYHLAKV---NGGQVLVCAPSNVAVDQLCERIHRtglkvvrltaksredvessvsF 538
                    67888999998777753788889*****9988887777555...5899********************9888886544333333333320 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.44
                    HHSSEEEESSGGG-BHHHHHHHHHHHTTTTTEEEEE-GGG CS
  UvrD-helicase 255 erykeiliDEyQDTnkiQyrilkllasgheelfmvGDpkQ 294
                     +++++liDE   T+++  + +  l+ g +++++vGD  Q
     KHJ33040.1 608 MKFRTVLIDE--STQSAEPECMIPLVLGCKQVVLVGDHQQ 645
                    689*******..5777777777777777779******999 PP

>> AAA_10  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   1.2e-05     0.012      19     133 ..     463     584 ..     451     598 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.2e-05
      AAA_10  19 tnasasliiGdlGnGKSvlakllvlyi.sllggkaliiDpkke.rekfketlpeiakkinvvtLdse..eenegvLdPlvllkeekeaes....laedi 109
                  + + sli G++G GK v++ ++++ +  + gg++l+  p +    +  e++      ++vv+L+ +  e+ e +   l+l ++ +   s    ++ + 
  KHJ33040.1 463 LQKPLSLIQGPPGTGKTVTSATVIYHLaKVNGGQVLVCAPSNVaVDQLCERIHR--TGLKVVRLTAKsrEDVESSVSFLSLHEQVRMNDSnvelMKLA- 558
                 5567799************999887761577899***99*99844556666665..568999998552266666777777777444332200002222. PP

      AAA_10 110 lel....llgvkkkesekkaalseavea 133
                   +    l ++++++++k++al  a e+
  KHJ33040.1 559 --QlkteLGELSSQDEKKFKALTRAAER 584
                 ..12334777888888888888877655 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.8e-05     0.018       4      73 ..     455     520 ..     452     557 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.8e-05
                 HHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   4 QaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkky 73 
                 Q +a+  +l++   l++++ G+GKT   +  v+ +++   + +g ++l+ +P+   + q ++++ + + +
  KHJ33040.1 455 QISAVRSVLQKPLSLIQGPPGTGKTVT-SATVIYHLA---KVNGGQVLVCAPSNVAVDQLCERIHRTGLK 520
                 777888899888999**********88.666666774...69999***************9999876654 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   2.1e-05     0.021      20      81 ..     466     528 ..     445     574 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.1e-05
      ATPase  20 rvvlitGepGtGKtifalqFlikgaekygepgvfvtveepa.edlrenakslGwdlekleeeg 81 
                    li G pGtGKt+ +++ +++ a+  g +++  +    a  +l e++++ G  + +l ++ 
  KHJ33040.1 466 PLSLIQGPPGTGKTVTSATVIYHLAKVNGGQVLVCAPSNVAvDQLCERIHRTGLKVVRLTAKS 528
                 5679**********************9888888887766666899999999999988887663 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   9.1e-05     0.091       7      61 ..     467     515 ..     462     531 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 9.1e-05
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrell 61 
                 + ++ G++GtGKT++ +++ + l ++      + ++v+v++ps    ++l++++ 
  KHJ33040.1 467 LSLIQGPPGTGKTVTSATVIYHLAKV------NGGQVLVCAPSNVAVDQLCERIH 515
                 66899******************888......99999*****9999999999885 PP

>> Ribosomal_S13_N  Ribosomal S13/S15 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00045      0.44      28      53 ..     748     773 ..     737     774 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00045
                      --HHHHHHHHHHHHHTT--HHHHHHH CS
  Ribosomal_S13_N  28 lskeeveelivklakkGltpSqIGvi 53 
                      +++++ve+ + ++ k G++p+ IGvi
       KHJ33040.1 748 TEASNVEKIVTRFFKAGVQPADIGVI 773
                      68899*******************98 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00035      0.35       5      67 ..     469     531 ..     465     553 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00035
                 EEEESTTSSHHHHHHHHHHHHHHTTS-EEEEEESTSSTTHHHHHHHHHHHTTEEEEE..SSTTSC CS
       SRP54   5 llvGlqGaGKTttlaKLaallkkegkkvllvaaDtfRaaAveQLktlaeklgvpvik..kkeead 67 
                 l+ G+ G+GKT t a +  +l k +   +lv+a      Av+QL +  +++g +v++  +k+ +d
  KHJ33040.1 469 LIQGPPGTGKTVTSATVIYHLAKVNGGQVLVCAPS--NVAVDQLCERIHRTGLKVVRltAKSRED 531
                 788************99999999866666666655..579***********99999854333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1094 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.84u 0.30s 00:00:01.13 Elapsed: 00:00:00.48
# Mc/sec: 6810.92
//
Query:       KHJ33041.1  [L=452]
Description: putative mannose-6-phosphate class i [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.5e-135  452.2   0.0   1.7e-135  452.0   0.0    1.0  1  PMI_typeI      Phosphomannose isomerase type I
  ------ inclusion threshold ------
      0.033   14.4   0.0       0.59   10.4   0.0    2.4  2  Ribosomal_S15  Ribosomal protein S15
       0.21   11.3   0.0       0.92    9.3   0.0    1.9  2  Cupin_2        Cupin domain


Domain annotation for each model (and alignments):
>> PMI_typeI  Phosphomannose isomerase type I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  452.0   0.0  2.8e-139  1.7e-135       1     372 [.      14     415 ..      14     416 .. 0.93

  Alignments for each domain:
  == domain 1  score: 452.0 bits;  conditional E-value: 2.8e-139
                 EEEEEEEEEE-TTBEECGGSHHHHHHHHH-TT......TTSCEEEEEEC--TTS-EECTTTC..CCCHCHHHHHHHTGHHHCCHHTSS-SEEEEEEEES CS
   PMI_typeI   1 lfkLqcgvqnyaWGkiGsesalakllaasdPs....ieedkpyaElWmgtHpkgpskvlnkk..lkdvvlkellaelresvgkkfgeelpfLfKvLsve 93 
                 l++L+cgv+ny WGkiG + ++a l+aa  Ps    i+ed py+ElWmgtH + psk+l +k  l d+++++ +a+ + ++  kfg +lpfLfKv+s+e
  KHJ33041.1  14 LIRLECGVNNYNWGKIG-SGSVAALFAAATPSddftIQEDLPYSELWMGTHLSNPSKDLHSKrtLLDIIKNN-QALISAEIYSKFGAKLPFLFKVISIE 110
                 689**************.788999*********************************9999989****9998.99************************ PP

                 S---EEE---HHHHHHHHHH.TCCCHCCCTTTEEEEESS.EEEEEEE..HHHHHHHCCCEHCCHCCCECCHHCCHHHHHHCCH.TTSHHHHC.CCCHHC CS
   PMI_typeI  94 kvlSiqvHPdKklaeilhaadpknYpddNhkpElaiAltdFeglcgfrpleeiveflkkvselaeligeetaksleelvslie.agdpealk.kkkvlq 190
                 k+lSiq+HP+Kkla+ilh++dp+nYpddNhkpE++iAlt+Feglcgfrpl ei++fl +v+ l++lig  +a++++ ++  +e ++ pe+   +kk+lq
  KHJ33041.1 111 KALSIQAHPNKKLAKILHKKDPNNYPDDNHKPEMTIALTPFEGLCGFRPLCEISHFLSTVPSLKSLIGTIQAEEFQAATGNNElQDTPEKKYmNKKSLQ 209
                 *******************************************************************************99997888888889****** PP

                 CHCHCCCTTTHHCCCHCCCCCCCCCCC-H........HHCCCC-.......HHHHCCHCHHHSTTTTCHCH.TTEEEEEE.TT.EECCHCCHHCECCEE CS
   PMI_typeI 191 klFssllnsekekikqklallveriqssd........aevnktd.......laelidrlneqyPddiGlfa.llLNlvkLnpGEAmflkandphaylsG 273
                 k+F  l+n++ e ++ k ++lv+ + +s         +     d       +ael+ rln+q+P+diGlf+ ++LN+vkL+ GEAmflkand+haylsG
  KHJ33041.1 210 KVFQALMNAKPEDVELKSKELVKDALESGknfaggikG-----DfsntpqeMAELVIRLNDQFPGDIGLFVlFFLNYVKLDVGEAMFLKANDIHAYLSG 303
                 ********************999887776355444332.....35555678************************************************ PP

                 EEEEEEES-EEEEECCCECCEEECHCCHCH.EEEEEECCCCEE--BS...CEECE..........EEEEEECCCCECCEEECCC..TTEEEEE-TTS-E CS
   PMI_typeI 274 divecmaasdnvvRaGlTpKfidvkelvemltYkykpsdelklqqte...sllda..........svlydppieefavektklk..kgeatilplesas 357
                 di+ecmaasdnvvRaG+TpKf+dvk+l+emltY+y+p++e+kl++++                  svlyd  ieef+v+kt+lk  + +at++   ++s
  KHJ33041.1 304 DIIECMAASDNVVRAGFTPKFKDVKTLTEMLTYSYAPIEEQKLKPVDypyV--ILnstayssgssSVLYDASIEEFSVVKTELKrkGSKATFERIAGPS 400
                 ********************************************9998552..334466777788****************9998678999******** PP

                 EEEEEECEEEEEECC CS
   PMI_typeI 358 iliaveGtatiivsh 372
                 i+i+++G ++i+v++
  KHJ33041.1 401 IIICTSGSGKITVGS 415
                 ************987 PP

>> Ribosomal_S15  Ribosomal protein S15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   9.9e-05      0.59      34      59 ..      62      87 ..      58      90 .. 0.86
   2 ?    1.2   0.0     0.073   4.4e+02      56      72 ..     120     136 ..     109     143 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 9.9e-05
                   HHHHCTTT-HHHHHHHHHHHHHHHHH CS
  Ribosomal_S15 34 ehlkenkkDkhsrrgLlklvskRrkl 59
                    hl++ +kD hs+r+Ll +++  + l
     KHJ33041.1 62 THLSNPSKDLHSKRTLLDIIKNNQAL 87
                   7*****************99876665 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.073
                    HHHHHHHHHHH-HHHHH CS
  Ribosomal_S15  56 RrkllkYLkrkdverYk 72 
                     +kl k L++kd ++Y 
     KHJ33041.1 120 NKKLAKILHKKDPNNYP 136
                    589**********9995 PP

>> Cupin_2  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.36   2.2e+03      40      57 ..     283     300 ..     281     303 .. 0.86
   2 ?    9.3   0.0   0.00015      0.92      22      49 ..     401     428 ..     386     442 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.36
                 EEETTEEEEE-TT-EEEE CS
     Cupin_2  40 eleaGdsvyfpagtpHrf 57 
                 +l  G++++ +a+  H++
  KHJ33041.1 283 KLDVGEAMFLKANDIHAY 300
                 678899*******99987 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00015
                 EEEEEESEEEEEECTEEEEEETTEEEEE CS
     Cupin_2  22 ffyVleGegeltvdgeeveleaGdsvyf 49 
                 ++++ +G g++tv+++  e++aG +++ 
  KHJ33041.1 401 IIICTSGSGKITVGSKSEEVRAGYVFFL 428
                 799********************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3264.45
//
Query:       KHJ33042.1  [L=82]
Description: putative glycosyl [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       248  (0.0138323); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                         7  (0.000390429); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.42
# Mc/sec: 579.38
//
Query:       KHJ33043.1  [L=158]
Description: putative 3-oxo-5-alpha-steroid 4-dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-12   48.2   5.8    1.4e-12   47.9   5.8    1.3  1  Steroid_dh  3-oxo-5-alpha-steroid 4-dehydrogenase
  ------ inclusion threshold ------
      0.028   14.1   4.9      0.038   13.7   4.9    1.3  1  Arif-1      Actin-rearrangement-inducing factor (Arif-1)
      0.053   13.4   0.2      0.097   12.5   0.2    1.4  1  Lig_chan    Ligand-gated ion channel


Domain annotation for each model (and alignments):
>> Steroid_dh  3-oxo-5-alpha-steroid 4-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   5.8   2.3e-16   1.4e-12      36     136 ..      44     144 ..       1     158 [] 0.75

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 2.3e-16
  Steroid_dh  36 ylkkdrlllgivlfvlgmliniksdiiLrelrkegetkykiprgglFelvsapnyfgEilewigyalvtks....laalaFa..lftvlnltvraaahh 128
                 ++   +++l +++f+l+ +i+  ++++L +      +ky++p   lF++v++p+y+ E++ ++++al++      +++++F+  +f+v+nl+v a  + 
  KHJ33043.1  44 FT--LKTSLALAIFILASIIQNICHRHLFS-----LQKYSLPNHRLFQWVTCPHYTCECFIYLSLALISAPydrlFNSTVFMgfIFVVSNLAVTADGTK 135
                 33..357788999****************5.....578******************************975122256888854369************* PP

  Steroid_dh 129 kwykkkf.e 136
                 kwy  kf +
  KHJ33043.1 136 KWYDSKFgR 144
                 ******954 PP

>> Arif-1  Actin-rearrangement-inducing factor (Arif-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   4.9   6.4e-06     0.038      42     140 ..       3     108 ..       1     131 [. 0.79

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 6.4e-06
      Arif-1  42 fgmwilfymfyfiwkiivwtknrsss.........sntnvnfnlkenfyiaitcitvnvitglcwmlfaafqiyvfknghlpaldvlyrhydlesmcwn 131
                 +g+wi+  +fy++  i vw +  s           s    +f lk  + +ai  i   +i  +c   + ++q y + n +l    v   hy  e++++ 
  KHJ33043.1   3 VGIWIMGIIFYLVMGITVWIEGISRIdhdtpfgefSSLYSEFTLKTSLALAIF-ILASIIQNICHRHLFSLQKYSLPNHRLFQ-WVTCPHYTCECFIYL 99 
                 69*****************987664311111222255678999***9999996.56789*******999********988865.58899**99999999 PP

      Arif-1 132 sivyleidy 140
                 s+  +   y
  KHJ33043.1 100 SLALISAPY 108
                 988776655 PP

>> Lig_chan  Ligand-gated ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   1.6e-05     0.097       4      62 ..       5      65 ..       3      77 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.6e-05
                XXXXXXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHHHHHHHH...HHHHHHHHHHH CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxx RF
    Lig_chan  4 vWlsvlvalilvsivlflverfspyewrepeeaaetveneftlsnslw...fslgalvqqGc 62
                +W++ ++++++++i++++ e +s+ + + p  + ++   eftl +sl    f+l++++q+ c
  KHJ33043.1  5 IWIMGIIFYLVMGITVWI-EGISRIDHDTPFGEFSSLYSEFTLKTSLAlaiFILASIIQNIC 65
                9****************7.6788889898887766699999999998622256666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       713  (0.039768); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1243.65
//
Query:       KHJ33044.1  [L=93]
Description: hypothetical protein EV44_g3613 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00038   20.1   0.1    0.00046   19.8   0.1    1.0  1  AsmA_2    AsmA-like C-terminal region


Domain annotation for each model (and alignments):
>> AsmA_2  AsmA-like C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.1   2.6e-08   0.00046      21      88 ..       7      76 ..       5      83 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 2.6e-08
      AsmA_2 21 rlrspggklsgsgswst.k.ggaartnldlkldgvdlgallkrlglaevlgGkgslelnlswqgaplspd 88
                + ++p+ kl+g+++ ++ k g  a+++l+ k++  ++++++ ++ l+e  +  +++++nls+++++l+ +
  KHJ33044.1  7 KVQLPQTKLTGNATAQGlKsGSHASIKLSPKMEKGNIEDSFRNFKLDELSEDPITSDMNLSMTNQSLQYQ 76
                6778899999999988864355579***************************************999844 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       287  (0.0160076); expected 358.6 (0.02)
Passed bias filter:                      232  (0.0129399); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 689.64
//
Query:       KHJ33045.1  [L=273]
Description: hypothetical protein EV44_g5720 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.062   13.2  19.3        0.1   12.5  19.3    1.4  1  Rick_17kDa_Anti  Glycine zipper 2TM domain
       0.13   12.5   3.5       0.21   11.9   3.5    1.2  1  Ribosomal_L21p   Ribosomal prokaryotic L21 protein
       0.15   12.6   0.0       0.21   12.1   0.0    1.1  1  SNARE_assoc      SNARE associated Golgi protein


Domain annotation for each model (and alignments):
>> Rick_17kDa_Anti  Glycine zipper 2TM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5  19.3   1.7e-05       0.1       2      41 ..     191     227 ..     190     228 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.7e-05
  Rick_17kDa_Anti   2 GaliGAaaGgvaGaaigggggrvlGavvGAaaGavaGnai 41 
                       +l+G+aaGg + ++ g+   ++++av+G +aGav +n i
       KHJ33045.1 191 ATLVGGAAGGFLAHKAGA---GKVAAVLGSVAGAVGANII 227
                      69**************66...8**************9988 PP

>> Ribosomal_L21p  Ribosomal prokaryotic L21 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   3.5   3.5e-05      0.21      58      92 ..     221     255 ..     200     258 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.5e-05
                     CEEEEEEEEEE---EEEEEEETTTTEEEEEEE--E CS
  Ribosomal_L21p  58 kVeaevvehgkgkkiivfkkkrrknyrrkqghRqk 92 
                      V a+++eh+ g+k    +kk++k+ + k+ hR++
      KHJ33045.1 221 AVGANIIEHKLGHKDEKKHKKEKKHKKEKKHHRHD 255
                     69*******************************86 PP

>> SNARE_assoc  SNARE associated Golgi protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.5e-05      0.21       9      61 ..     194     253 ..     189     263 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.5e-05
  SNARE_assoc   9 aaGvlfglll.....gtlvtslgallGaslayllgrylgr..kalrrkllsekrvkaler 61 
                  ++G+++g+l      g ++++lg+++Ga+ a ++ ++lg+  ++  +k  ++k+ k+ +r
   KHJ33045.1 194 VGGAAGGFLAhkagaGKVAAVLGSVAGAVGANIIEHKLGHkdEKKHKKEKKHKKEKKHHR 253
                  45555555555555799**********************965333333333333333444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1630  (0.0909142); expected 358.6 (0.02)
Passed bias filter:                      594  (0.0331307); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.30s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 1877.67
//
Query:       KHJ33046.1  [L=181]
Description: hypothetical protein EV44_g1320 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.044   14.4   0.0      0.084   13.5   0.0    1.5  1  Asp_protease_2  Aspartyl protease


Domain annotation for each model (and alignments):
>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   4.7e-06     0.084      12      89 ..      83     167 ..      70     168 .. 0.64

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 4.7e-06
  Asp_protease_2  12 fllDTGasttlispelaeklglkvreseltvrvsgaggevkarlvrlds...lkl..ggltlknvpalvld.lgeeid..glLGmd 89 
                     ++ D G++ +lisp+l++ l+lk+ +++   +  +  g+  ++ +++ +   + l  gg++  +v a v++ +g +id  +lLG++
      KHJ33046.1  83 VCADQGSDLILISPQLVHVLNLKKNTLSHVNSHAVTMGTADGASHKIMEwvsFILgsGGVSR-EVHAFVQPdKGITIDlfLLLGLP 167
                     789*****************999988874433344445555444444433333342255444.55555555367777766677776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       293  (0.0163422); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1395.18
//
Query:       KHJ33047.1  [L=517]
Description: putative c2hc5 finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-21   75.7   6.0    3.3e-21   75.0   6.0    1.3  1  zf-C2HC5  Putative zinc finger motif, C2HC5-type
  ------ inclusion threshold ------
      0.022   14.9   0.4       0.09   12.9   0.4    2.1  1  DUF4107   Protein of unknown function (DUF4107)


Domain annotation for each model (and alignments):
>> zf-C2HC5  Putative zinc finger motif, C2HC5-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.0   6.0   3.7e-25   3.3e-21       1      54 []     221     273 ..     221     273 .. 0.97

  Alignments for each domain:
  == domain 1  score: 75.0 bits;  conditional E-value: 3.7e-25
    zf-C2HC5   1 rkkCnCqatrHpLleaapnClnCGkiiCakeglskpCsfCgspllsseerqelv 54 
                 r+ CnC +trHp+l+aapnCl+CGk+iC++egl +pC+fCg pllss+e q+++
  KHJ33047.1 221 RRTCNCIGTRHPILTAAPNCLSCGKVICIMEGL-GPCTFCGVPLLSSAEVQTMI 273
                 589******************************.*****************997 PP

>> DUF4107  Protein of unknown function (DUF4107)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.4     1e-05      0.09      49      85 ..      30      66 ..      22     126 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1e-05
     DUF4107 49 nlvadesenllGdddeiaknlkdfsdqlkGeklnlnr 85
                + +ad+ +nllG++ + +k + df+   kG+  nl  
  KHJ33047.1 30 DEAADHLNNLLGQSSQTTKFISDFNSSQKGDIKNLSS 66
                568999*************************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1758  (0.0980534); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3712.18
//
Query:       KHJ33048.1  [L=566]
Description: hypothetical protein EV44_g5630 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0011   18.0   1.0     0.0022   17.0   1.0    1.5  1  FAM178    Family of unknown function, FAM178
  ------ inclusion threshold ------
      0.094   12.7   0.6        0.4   10.6   0.1    2.2  2  Stn1_C    Telomere capping C-terminal wHTH


Domain annotation for each model (and alignments):
>> FAM178  Family of unknown function, FAM178
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   1.0   2.5e-07    0.0022     263     363 ..     305     408 ..     271     414 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 2.5e-07
      FAM178 263 LslCalvqpeaYtdeelllLlellcrisLdvqLrllpk..vdlqqlllklLenikd..WptklpelclalselsdhhHNLlalvqllpdvtsrgrqlrr 357
                 Ls+  +   ++ ++e+ ++L  +l r+sLd+ +       +++q+ l ++     +  W +  +e+c  + +  ++    l++v  l +vt r   lrr
  KHJ33048.1 305 LSFFSQ-VANVLSQESRMQLTSILLRMSLDKFVMRNIDifFQVQKTLENVCTTTPNvnWTSYCQEVCENVFCFIEKPNLRLQIVESLSSVTVRTHDLRR 402
                 444433.34577888999************9876544411566777777777766577****************99866699***************** PP

      FAM178 358 rLSlvi 363
                 rL  ++
  KHJ33048.1 403 RLASCF 408
                 **8665 PP

>> Stn1_C  Telomere capping C-terminal wHTH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.28   2.5e+03      39      62 ..     330     353 ..     303     389 .. 0.65
   2 ?   10.6   0.1   4.5e-05       0.4      68     112 ..     500     544 ..     493     553 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.28
      Stn1_C  39 knlkeYiqkrisvlikLqcltgti 62 
                  +l++++++ i+++ ++q ++ ++
  KHJ33048.1 330 MSLDKFVMRNIDIFFQVQKTLENV 353
                 367777777777777777665554 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 4.5e-05
      Stn1_C  68 reklklpelskkliidvfkeslrkiakqspellksWwidlksees 112
                 +++ +++++++k  ++ f + + +++ ++p+l+++W+++ + +++
  KHJ33048.1 500 QDSGNISKIQAKEAVEAFSRRITHTMRTKPKLVHEWFVNHDRKTN 544
                 566788999*****************************9998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       879  (0.0490267); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 3714.27
//
Query:       KHJ33049.1  [L=1676]
Description: putative kinesin family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-91  306.9   0.2    5.4e-91  305.0   0.2    2.1  1  Kinesin      Kinesin motor domain
    1.8e-21   76.6   1.5    2.4e-17   63.3   0.0    3.9  4  Microtub_bd  Microtubule binding
     0.0047   17.2   0.2      0.023   14.9   0.2    2.3  1  Mac_assoc    Unstructured region on maltose acetyltransferase


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  305.0   0.2   9.1e-95   5.4e-91      39     333 .]      63     403 ..      11     403 .. 0.93

  Alignments for each domain:
  == domain 1  score: 305.0 bits;  conditional E-value: 9.1e-95
                 SCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHTBC......TTTSBSHHHHHHHHHHHHHHHCTTTH.......... CS
     Kinesin  39 eekkfkFdkvfdeeatqeevyeetakplvesvleGynatifaYGqtgsGKTyTmegk......eeeeeGiipraleelFesikkekeek.......... 121
                  ++ f+Fd+vfde+++q+ v e + ++ ++++++Gyn++++aYGq+g+GK+yTm  +      ++e +G+ipra +elFe+++ +k +           
  KHJ33049.1  63 GRRLFTFDRVFDENVNQAGVWEYL-EESINAFVQGYNVSMLAYGQSGAGKSYTMGTSglieqcNTEATGVIPRAAAELFEKLEGMKPNIrhsmpslrtp 160
                 5677*****************996.9****************************999******9999***************998877699******** PP

                 ................EEEEEEEEEEEEEETTEEEETTSTTT..TSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTSTTSSCTSH CS
     Kinesin 122 ................ekefsvkvsylEiYneeiyDLLeskk..skkkkklkiredskkgevyvkgltevevksaeevlellekgeknrkvaetklnee 202
                                 +k++++k sy+EiYne+++DLL +++    +++++ ired k g+++++gl +ve++s+e++++ l+ g+  r++ +t++n++
  KHJ33049.1 161 akyssssvacsssmnsTKNWTLKASYVEIYNEQLRDLLVPETtpLYQRQNVIIREDVK-GHIILSGLYQVEINSVEDMMSALNFGSMIRQTDSTAINAK 258
                 ****************999********************998775677789******9.56************************************** PP

                 HCCSEEEEEEEEEEEETTTTTC..EE.............EEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTSTSCGG CS
     Kinesin 203 SSRSHavftitleqknlkeete..ek.............vkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaekkkskhipYR 286
                 SSRSHavf+++l q+++   ++  ++             +  sk+++vDLAGsEr+++tg a+ger kE+ +iN  L  Lg+vis+L+ +++ +h+ YR
  KHJ33049.1 259 SSRSHAVFSLNLVQNKIRCPDSfvKEkyssapveneatiTVDSKFHFVDLAGSERLKNTG-AQGERAKEGISINAGLASLGKVISQLSCRQAGSHVSYR 356
                 **************99987777753368999******99999******************.5899********************************** PP

                 GSHHHHHTGGGHSSSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHCTT CS
     Kinesin 287 dSkLTrlLqdsLgGnsktlmivtvspssenleetlstlkfaerakei 333
                 dSkLTrlLqdsLgGn+ t mi++++p + +++etl+tl++a+ra+ i
  KHJ33049.1 357 DSKLTRLLQDSLGGNAITYMIACITPVEFHMSETLNTLQYAQRARAI 403
                 ********************************************986 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.3   0.0     4e-21   2.4e-17      16     124 ..      13     146 ..       3     158 .. 0.86
   2 !    9.9   0.1   0.00011      0.65     123     149 .]     172     198 ..     150     198 .. 0.79
   3 ?   -2.4   0.1      0.68   4.1e+03      43      64 ..    1249    1287 ..    1200    1294 .. 0.65
   4 ?   -3.6   0.1       1.6   9.7e+03     114     147 ..    1383    1414 ..    1371    1415 .. 0.78

  Alignments for each domain:
  == domain 1  score: 63.3 bits;  conditional E-value: 4e-21
                  HHHCTB-EEEEEEECCCS-T...............EEEETTT.........TTTEEEE-SEEEECTTHCCCCCCCCHHHHHHHHTT--EEEEEEES.. CS
  Microtub_bd  16 qelkGniRvfarvrpelesek..............akikfpe......eekkkkkefsFdrvfeseseqeevfeeisqlvqsaldgynvcifaygqTG 93 
                  +e+k+++ v +rvrp+l+  +              ++++  +      e  + ++ f+Fdrvf+++ +q+ v e ++  ++  ++gynv+++aygq G
   KHJ33049.1  13 DETKCSVKVVVRVRPPLQPTDpgyelipqrfqrsmVQVT--SptnlaiECPQGRRLFTFDRVFDENVNQAGVWEYLEESINAFVQGYNVSMLAYGQSG 108
                  589****************87899998877666544444..1447888777899******************************************** PP

                  .....................ST-HCHHHHHHHHHHCC CS
  Microtub_bd  94 sGKtyTmeg.......eeeeagmipraveeifetisel 124
                  +GK+yTm +       ++e +g+ipra  e+fe+++  
   KHJ33049.1 109 AGKSYTMGTsglieqcNTEATGVIPRAAAELFEKLEGM 146
                  *******8888999999999*************99876 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00011
                  CCTSCCCCEEEEEEEEEEESS-EEETT CS
  Microtub_bd 123 elkekgwkyeielqfveiynekvqDlL 149
                  +  + ++++++++++veiyne+++DlL
   KHJ33049.1 172 SSMNSTKNWTLKASYVEIYNEQLRDLL 198
                  33346778899***************8 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 0.68
                   T....................TTTEEEE-SEEEECTTHC CS
  Microtub_bd   43 e.................eekkkkkefsFdrvfeseseq 64  
                                     +++ +k  +++ +++++e+e+
   KHJ33049.1 1249 MnehekivntlqrdldylRKNYQKDLYEYKQIIQAETES 1287
                   033333333344556666667888888888888888754 PP

  == domain 4  score: -3.6 bits;  conditional E-value: 1.6
                   HHHHHHHHHCCTSCCCCEEEEEEEEEEESS-EEE CS
  Microtub_bd  114 veeifetiselkekgwkyeielqfveiynekvqD 147 
                   + ei++++s+  ++ ++ +i+ q+v ++ e + D
   KHJ33049.1 1383 IAEILKIMSDS-KYRQQKSISDQLVALKKE-IVD 1414
                   67889999888.688999999999999988.555 PP

>> Mac_assoc  Unstructured region on maltose acetyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.2   3.9e-06     0.023     113     178 ..     528     591 ..     523     596 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 3.9e-06
   Mac_assoc 113 ksKsdykvvpsirelshasshpKpglplfqggidqrpahpssvdtsspqaqARlALsiEhqlsara 178
                 ++ sdy+ v  i++l ++ s ++++l++ ++++ +++++ ss++t + q qARl   +E + s+++
  KHJ33049.1 528 QALSDYQSV--IQNLEKSLSETRSSLAIAENNLLEKETKCSSIETLNQQLQARLQKLVERETSTEN 591
                 6679*****..7777777799************999999***************999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2425  (0.135256); expected 358.6 (0.02)
Passed bias filter:                      593  (0.0330749); expected 358.6 (0.02)
Passed Vit filter:                       105  (0.00585643); expected 17.9 (0.001)
Passed Fwd filter:                        60  (0.00334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 2.29u 0.41s 00:00:02.70 Elapsed: 00:00:00.69
# Mc/sec: 7325.20
//
Query:       KHJ33050.1  [L=230]
Description: putative vacuolar atp synthase subunit e [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.4e-64  214.6  12.1      1e-63  214.4  12.1    1.1  1  vATP-synt_E  ATP synthase (E/31 kDa) subunit


Domain annotation for each model (and alignments):
>> vATP-synt_E  ATP synthase (E/31 kDa) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.4  12.1   5.7e-68     1e-63       1     199 []      22     220 ..      22     220 .. 0.97

  Alignments for each domain:
  == domain 1  score: 214.4 bits;  conditional E-value: 5.7e-68
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHCCCCH CS
  vATP-synt_E   1 fIrqeAeekAeeIkakaeeefeiekaklveeeeekieeayekkeKqaelqkkiaiSnalnkarlkvLkareevleevfeeaekkLaeveedkdeYkel 98 
                  fI+qeA ek +eI+ ka+eef+iek+klv++e+++i+ ayekk K ae++++ia S+++nk+rlk+L+ar+e+l+++f+ aekkLa++++d+++Y+++
   KHJ33050.1  22 FIKQEALEKGREIEIKADEEFAIEKSKLVRQETQAIDTAYEKKFKAAEMSQQIARSTVANKSRLKILSARQELLDDIFQSAEKKLADITKDNQKYQDV 119
                  8************************************************************************************************* PP

                  HHHHHCCCCCCC-SSCEEEEECCCCHHCCCCTHCCCCCCHHCCSSSS--SE.EEEESSEBTTSSSEEEECCSSSCEEECCCHHHCHHHHHHHHHHCCC CS
  vATP-synt_E  99 lkkLivqalvkleepevivrarkeDaelveealdkaaeeykaktkkktvev.agdeedfledvlGGvvleaadgkikvnnTlearLelvleqllpeir 195
                  lk+L+ +++++l+e ++ vrark D++ +++++++a++e+k++++++ +ev +++ + ++e+ +GG+ + +  gki++nnT+ +rL+l+ e++lp ir
   KHJ33050.1 120 LKNLLLEGMYALNEKKIFVRARKSDYDTLKKSITDASKEFKKNIQRD-IEVsIIEANPLPEESSGGIFIISGGGKIDINNTFGERLKLLQENALPSIR 216
                  ***********************************************.665155666777************************************** PP

                  CCHC CS
  vATP-synt_E 196 kaLF 199
                  +aLF
   KHJ33050.1 217 TALF 220
                  ***9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1683  (0.0938703); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 1759.68
//
Query:       KHJ33051.1  [L=180]
Description: putative ctr copper transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-14   54.0   0.1    3.7e-14   53.6   0.1    1.2  1  Ctr       Ctr copper transporter family


Domain annotation for each model (and alignments):
>> Ctr  Ctr copper transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.1   2.1e-18   3.7e-14       1     122 [.      53     180 .]      53     180 .] 0.83

  Alignments for each domain:
  == domain 1  score: 53.6 bits;  conditional E-value: 2.1e-18
         Ctr   1 mlFhwstddtilfrsWritskgqlagsciglfllaifyeflralrerlerewdrhlarsrekrkaassplvdssssseeeaea..........kstssl 89 
                 m+F  s+++t++++ W++++ g++a++ci+l++la + +fl al++rle  w+   +++r +  + + pl+++ + + ++  +          +   + 
  KHJ33051.1  53 MVFFNSIKTTLYMSMWTPNNMGSYAATCIFLIFLATGHRFLFALKSRLEAYWSDLDVNQRLAVTSGKLPLSERIAMDPSS--RkmvlsemgveEDVIVI 149
                 99************************************************999988766665555555555433333222..23578888877778888 PP

         Ctr  90 skseakksvrttpeqqlirallyvvqvllaYil 122
                 +k++ ++++r+t++   ira+l ++ ++++++l
  KHJ33051.1 150 QKRKLSTPWRLTVD--PIRAILDTIIAAVGFFL 180
                 89999999999999..***************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1401.35
//
Query:       KHJ33052.1  [L=118]
Description: hypothetical protein EV44_g3743 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.18   12.6   0.0       0.22   12.3   0.0    1.1  1  DUF5124   Domain of unknown function (DUF5124)


Domain annotation for each model (and alignments):
>> DUF5124  Domain of unknown function (DUF5124)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.2e-05      0.22      16      90 ..      22      96 ..      11     105 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.2e-05
     DUF5124 16 gtdGaiydclekyskaevyylvGdfmqlessd..aklscialvdtkGsvagkwnstdfkldsgqGlgidlknpnvae 90
                 ++ ++ydcl k s+a++  ++ d m+  +s    ++  + ++d k + a     t+ k+ s     i+ ++pn ++
  KHJ33052.1 22 TVSRSLYDCLVKLSTAQEERIMIDLMSPCQSYerREIAEVMWIDGKCNPADS--MTKIKASSALQKLINTNKPNLTQ 96
                678899********************98555411458888899888888844..58888888877777777787776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       604  (0.0336884); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.19s 00:00:00.56 Elapsed: 00:00:00.34
# Mc/sec: 1049.81
//
Query:       KHJ33053.1  [L=682]
Description: putative m protein repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-18   66.0  64.8    1.1e-17   63.6  64.8    2.6  1  HOOK           HOOK protein
  ------ inclusion threshold ------
      0.069   12.4   0.2       0.19   11.0   0.2    1.7  1  Candida_ALS_N  Cell-wall agglutinin N-terminal ligand-sugar b


Domain annotation for each model (and alignments):
>> HOOK  HOOK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.6  64.8   1.2e-21   1.1e-17       4     695 ..      10     677 ..       8     682 .] 0.74

  Alignments for each domain:
  == domain 1  score: 63.6 bits;  conditional E-value: 1.2e-21
        HOOK   4 sLlkwlqtfnlsapcktvedlsdGvalaqvlnqidpewFtesWlskikedvg.dNwrLkvsNlkkilesvleYyke.vLnq.qlsdellPdvnkiaeks 99 
                 +Ll+w++tf l++ + ++ +lsdG   +++l+ i++++  +     + +++g + w    + l  + +s+l Y  + + n+ +++ e++ d+n ia + 
  KHJ33053.1  10 ALLNWVNTFPLETKVGSIGELSDGTVFSRMLKDINSDYVVQF----LEQNTGpSKWISNKKSLEAVYKSLLRYIGDkCPNLdSVAFESKVDLNAIARQD 104
                 69*********************************9987654....3444441567777889***********98834443267788999********* PP

        HOOK 100 dakELgrLlQLiLGcAvnCekKqeyIqqimt.leEsvqhvvmtaiQellske..glaslseeslgeldsqlrklleelkeaqeekdelaQrcheldkql 195
                 d +E  +Ll + L +Av+  k  +yI  i t l  s q+++++ i +  s     ++++   ++ e+d  l  l e+  +   e ++l+ +  +   + 
  KHJ33053.1 105 DLQETVKLLTIFLMAAVEGPKNRDYIYLITTkLSTSAQEEIKKIILHAKSLAhqNTKQVAGSATPEIDPIL-ALEEKHAALYMEYENLRKKHADFMTRF 202
                 ***************************99755999999999998865444432122556666666666665.2333444556788************** PP

        HOOK 196 sllqeEknaLlaenkklqerlselengeesgtiqltskkylelqkqleqlqeelfrlEtarddyrlkceelekevlelqqrneeltslaeEaqaLkDEv 294
                   l+  +  L++ n++   +l++l++ ++  +++ ++k++    +++++l+e +   E+  +  r+  e++ +e+  l+  +  lt+  +E ++LkDE 
  KHJ33053.1 203 ERLTISHDDLIQHNNNTDTKLKSLQESKDGDHANFIKKQM----ERIQELEEIIASQEQELEADRILKEKQTRELSSLRPLTTRLTQYQDELKELKDEN 297
                 *************************888888885555444....45667778888899999999*********************************** PP

        HOOK 295 DvLresadkvkkleatvetykkkledlndLrrqvklleernaeYlqktveleeelkkanalrsqlelykkqvqelhkklseeskkadklefelkkleek 393
                   L ++a+kv+++ +++e       +  +Lr ++ llee++ +Y +   e     k a ++ s+ + +  +++e+ ++        + l+ e++ l+ +
  KHJ33053.1 298 LNLVKKANKVEHYLKKLENHTSLQRENTELREKIDLLEENQKDYDKVFEENSRYRKTAIEYSSRFQEQELHIVEISSQK-------NALKQEVQFLNYR 389
                 *********************9999****************99977544444444444444555555555555555444.......4455555555554 PP

        HOOK 394 lealqkekerllaerdaLketneELkc..aqlqqkelsqadalaskssssgenlaaellpaevreklirLqhENKmLklkqegseeekltelqelleda 490
                 ++ l+   er   +   + +++e L++  +ql +++l++     s ++   e  + e +p ++  +  rL++E K L   q  + + ++++l+  l ++
  KHJ33053.1 390 ISELN---ERQQHDEKFINDLQEQLRIssGQLCSESLTTGKRGLSLEE---ELEQVEDTP-NIALENSRLKAEIKSL---QSSNANSEVAQLNIDLLES 478
                 44443...2223344445555666665223455555443333333333...223334444.4555558*********...666667788999988889* PP

        HOOK 491 nrrkneLetenrlanqrileLeaqveelqkalqeqgskaedssllkkkleehleklkevqeelqkkkeqleelepklssnkqkieeleeaLkkkdedlk 589
                 +r +++Le+  +   ++ + +++q++ l k+ q    k+e+  ++ +k+   +e  +e+   ++k  ++l e + + +++ +k++++ + L++    l 
  KHJ33053.1 479 ERARKKLEERYKELFEKHITVQQQLDALLKTSQV--EKTES-LATTRKM--YIETSQELTTTKAKLIQILSESSVRDRETLEKNQAVAALLSN---GLL 569
                 ****************************999877..56664.5555554..67778899999999999****999999999********9985...677 PP

        HOOK 590 ameerYkkyveKAksViktLdpkqnpaspaevq..alknqlaekdkki..eslerevekakl....lreqeEkLivsAwYnlglalqreavderlaals 680
                  ++++         + ik L+ ++ +++ +e+q    knq  e++++i  e+l+ +v+ ++     +   e  L+++AwY l + +q + +   l++++
  KHJ33053.1 570 TLNDKISV----INDHIKFLEEQALQNQHSEIQinESKNQHLEEKDNIvhEKLSDKVKSTNEiiirNLSRENALLTTAWYDLTNRIQSNHIV--LQRRQ 662
                 77776443....456688888776554445555115677766555554123455555555446755557899*************9988764..34445 PP

        HOOK 681 gqgqsFLarQRqatn 695
                    +s+L +QRq  n
  KHJ33053.1 663 DVPKSWLNKQRQIVN 677
                 5689********876 PP

>> Candida_ALS_N  Cell-wall agglutinin N-terminal ligand-sugar binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.2   2.1e-05      0.19      83     172 ..     345     435 ..     340     451 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 2.1e-05
  Candida_ALS_N  83 FnaGgsassvdleaakcFkaGt.ntvtfsdgdkklsttvnfeageestsadklvysarrtpslnklqsyllagnCpngyssgtlgitikns 172
                    F+   +  ++++e +++F++ + + v+ s +++ l+++v+f + + s+ ++ +  + ++++ l+++  +  ++ C++ +++g+ g++ +++
     KHJ33053.1 345 FEENSRYRKTAIEYSSRFQEQElHIVEISSQKNALKQEVQFLNYRISELNERQQHDEKFINDLQEQLRISSGQLCSESLTTGKRGLSLEEE 435
                    66666778899999999997652779******************999888999******************************99977665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (682 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2304  (0.128507); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.99u 0.29s 00:00:01.28 Elapsed: 00:00:00.47
# Mc/sec: 4342.38
//
Query:       KHJ33054.1  [L=725]
Description: putative mrna cleavage factor complex component pcf11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.4e-06   26.4   0.7    9.8e-05   22.8   0.7    2.7  1  CFIA_Pcf11  Subunit of cleavage factor IA Pcf11
    3.2e-05   24.7   0.0    8.2e-05   23.4   0.0    1.7  1  CTD_bind    RNA polymerase II-binding domain.
    0.00016   21.5   0.0    0.00038   20.3   0.0    1.5  1  VHS         VHS domain
  ------ inclusion threshold ------
       0.37   10.4   8.0       0.89    9.2   3.3    2.9  2  zf_UBZ      Ubiquitin-Binding Zinc Finger
        1.4    9.5   4.4        2.6    8.7   0.0    3.4  4  LLC1        Normal lung function maintenance, Low in Lung Can
        1.6    9.2   3.6         17    5.9   0.3    2.8  2  Zn-C2H2_12  Autophagy receptor zinc finger-C2H2 domain
        1.7    8.6   3.2        4.8    7.2   0.2    2.5  3  zf-C2HC_2   zinc-finger of a C2HC-type


Domain annotation for each model (and alignments):
>> CFIA_Pcf11  Subunit of cleavage factor IA Pcf11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.7   3.8e-08   9.8e-05       3      32 ..     575     604 ..     573     641 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 3.8e-08
                 XXXXXXXXXBXBXXXXXHHHHHTXXTHHCH CS
  CFIA_Pcf11   3 kttttakniQsRnWYLddsqWvkfkddeiv 32 
                 ++++++ + Q+R+WY+d+ +W+k ++ ++ 
  KHJ33054.1 575 RMEEAELRGQHRSWYVDELDWIKSREIDLE 604
                 67888899*****************98875 PP

>> CTD_bind  RNA polymerase II-binding domain.
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   3.2e-08   8.2e-05       1      59 [.      61     115 ..      61     116 .. 0.95

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 3.2e-08
    CTD_bind   1 kLnllYLaNdvlqnskrkqkdefapaFapvlpeafadaykkapekikkklkrllniWee 59 
                 kL+ +Y++++v++n        ++  F++ l  +f  ay+  ++ +++k+ ++l+ W+e
  KHJ33054.1  61 KLPSFYVLDSVVKNVG----TPYTLFFGRQLYATFMEAYALVDNNVRRKMDEMLKTWKE 115
                 89************83....89******************99999************98 PP

>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   1.5e-07   0.00038      34     119 ..      34     115 ..      17     125 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1.5e-07
                 HHCS.TCHHHHHHHHHHHHHT-SSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHCTTTCHCS.HHHHHHHHHHHHHH CS
         VHS  34 inek.eagpkeavrlikkkinsknphvallaLklldalvkNcGskfhleiaskeflnelvklilekknsklakvkkkvlelleeWad 119
                 i ++  +++   ++++k  i+  +p+  l +  +ld++vkN G++  l ++++     l++ + e ++  +++v++k+ e+l+ W++
  KHJ33054.1  34 IAKEnTEHALAISEALKNHIKTTSPNKKLPSFYVLDSVVKNVGTPYTLFFGRQ-----LYATFMEAYALVDNNVRRKMDEMLKTWKE 115
                 44444778888899********************************9988875.....778888889999999************87 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   3.3   0.00035      0.89       4      25 ..     544     570 ..     542     570 .. 0.83
   2 ?    2.3   0.2     0.048   1.2e+02       4      17 ..     642     655 ..     639     657 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00035
      zf_UBZ   4 lCerCgkeipes.e....lqEHeDwHf 25 
                 +C++Cg++++ + e    ++ H DwHf
  KHJ33054.1 544 PCSQCGRRFQADvEgkkkKEAHMDWHF 570
                 7*******998655555599******9 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.048
      zf_UBZ   4 lCerCgkeipesel 17 
                 lC+ C+++++++ l
  KHJ33054.1 642 LCPICQEKFEMNWL 655
                 7*******998755 PP

>> LLC1  Normal lung function maintenance, Low in Lung Cancer 1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.94   2.4e+03      44      67 ..     108     131 ..      92     165 .. 0.78
   2 ?   -2.1   0.1       2.2   5.7e+03      58      80 ..     371     393 ..     329     408 .. 0.53
   3 ?   -1.1   0.0       1.1   2.8e+03      50      79 ..     483     512 ..     466     526 .. 0.77
   4 ?    8.7   0.0     0.001       2.6      61     103 ..     678     720 ..     652     723 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.94
        LLC1  44 ekkekpkielpeklrirpvtpiek 67 
                 e+ +++k  +p  + +rpv+p e 
  KHJ33054.1 108 EMLKTWKEPVPGSMDTRPVFPPEV 131
                 366788899999999999988764 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.2
        LLC1  58 rirpvtpiekyikvkpsppvPkT 80 
                   ++v ++++ +k+++  + P+T
  KHJ33054.1 371 IRTQVAQLSEACKTQSMIQAPRT 393
                 23334444444444444444444 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1.1
        LLC1  50 kielpeklrirpvtpiekyikvkpsppvPk 79 
                  +++ + ++  p  ++   i+++psp++P 
  KHJ33054.1 483 ATSVTNSFNFLPTVKVPPLININPSPRIPV 512
                 455666788888888889999999998884 PP

  == domain 4  score: 8.7 bits;  conditional E-value: 0.001
        LLC1  61 pvtpiekyikvkpsppvPkTtqgfiGwrStqpqlnLeiygkia 103
                    +++k+ik++++   P+Tt   +G r ++ +l++ i +ki+
  KHJ33054.1 678 CYAEVSKNIKSQNIVGTPETTITVLGKRKADDDLSMTIKTKIK 720
                 56799*****************************999988875 PP

>> Zn-C2H2_12  Autophagy receptor zinc finger-C2H2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.3     0.046   1.2e+02       6      27 .]     548     570 ..     545     570 .. 0.87
   2 ?    5.9   0.3    0.0068        17       3      11 ..     643     651 ..     642     654 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.046
  Zn-C2H2_12   6 CseqFpknvd.qdeFeeHVesHF 27 
                 C+ +F+++v+ + + e H++ HF
  KHJ33054.1 548 CGRRFQADVEgKKKKEAHMDWHF 570
                 99999999986677899*****9 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0068
  Zn-C2H2_12   3 CPlCseqFp 11 
                 CP+C e F 
  KHJ33054.1 643 CPICQEKFE 651
                 ******996 PP

>> zf-C2HC_2  zinc-finger of a C2HC-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       3.1   8.1e+03      15      22 ..      47      54 ..      46      55 .. 0.82
   2 ?    7.2   0.2    0.0019       4.8       4      14 ..     544     554 ..     543     556 .. 0.85
   3 ?    1.4   0.1      0.12   3.1e+02       5      13 ..     643     651 ..     642     653 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 3.1
   zf-C2HC_2 15 drlekHep 22
                ++l +H++
  KHJ33054.1 47 EALKNHIK 54
                689***98 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0019
   zf-C2HC_2   4 pCpkCgRsFnp 14 
                 pC  CgR+F +
  KHJ33054.1 544 PCSQCGRRFQA 554
                 9********65 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.12
   zf-C2HC_2   5 CpkCgRsFn 13 
                 Cp+C  +F 
  KHJ33054.1 643 CPICQEKFE 651
                 ****99995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (725 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.64u 0.24s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 5122.11
//
Query:       KHJ33055.1  [L=192]
Description: hypothetical protein EV44_g3119 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.042   14.3   0.0         11    6.7   0.0    2.4  2  ANAPC2    Anaphase promoting complex (APC) subunit 2


Domain annotation for each model (and alignments):
>> ANAPC2  Anaphase promoting complex (APC) subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0   0.00059        11      21      48 ..      81     108 ..      79     110 .. 0.93
   2 ?    5.2   0.0    0.0017        31      16      46 ..     137     165 ..     130     169 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.00059
      ANAPC2  21 LkmfvpkdegydisdeeLkefLdelvke 48 
                 L++++p+ + yd ++e L++f ++lv++
  KHJ33055.1  81 LRVTAPQITPYDGKSENLRSFCSQLVNQ 108
                 899****99****************986 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0017
      ANAPC2  16 RIhsmLkmfvpkdegydisdeeLkefLdelv 46 
                 ++ s  + +   d++++ ++++L+ fL+ l 
  KHJ33055.1 137 KMRSSFRCLE--DPSVPAEITTLQGFLEALK 165
                 3444444444..999************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1496.49
//
Query:       KHJ33056.1  [L=309]
Description: hypothetical protein EV44_g1311 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1951  (0.108818); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2210.88
//
Query:       KHJ33057.1  [L=848]
Description: putative psp1 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-27   93.8   2.0    1.3e-26   92.7   2.0    1.6  1  PSP1      PSP1 C-terminal conserved region


Domain annotation for each model (and alignments):
>> PSP1  PSP1 C-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.7   2.0     7e-31   1.3e-26       3      86 .]     602     685 ..     600     685 .. 0.98

  Alignments for each domain:
  == domain 1  score: 92.7 bits;  conditional E-value: 7e-31
        PSP1   3 vlrlatpedvstnlenkqdeekalhiaqeklkelnlnmklldaefqfdrkkltfyYvaeervDFreLvkeLfkfyktRIwLcai 86 
                 + rla++++++ ++e++  e+ka h++ +k++e++l+m +ldaefq+d kkltfyY a++ ++F +Lv +Lfk+yktRIw+ ai
  KHJ33057.1 602 IKRLAQKHEIDALREKEGSEAKAKHVCAQKVQEHGLHMDILDAEFQMDLKKLTFYYFADSYINFNSLVTDLFKIYKTRIWMFAI 685
                 88*******************************************************************************887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (848 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       775  (0.0432261); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 5888.95
//
Query:       KHJ33058.1  [L=271]
Description: putative duf1711 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.3e-61  206.2  20.7    8.6e-61  206.0  20.7    1.1  1  INO80_Ies4     INO80 complex subunit Ies4
     0.0056   16.2   0.1      0.011   15.2   0.1    1.5  1  DHBP_synthase  3,4-dihydroxy-2-butanone 4-phosphate synthase
  ------ inclusion threshold ------
        7.4    7.1   6.6        1.1    9.7   0.3    2.4  3  SIT            SHP2-interacting transmembrane adaptor protein


Domain annotation for each model (and alignments):
>> INO80_Ies4  INO80 complex subunit Ies4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  206.0  20.7   1.4e-64   8.6e-61      14     241 ..      10     240 ..       1     241 [. 0.74

  Alignments for each domain:
  == domain 1  score: 206.0 bits;  conditional E-value: 1.4e-64
  INO80_Ies4  14 drrksekakkklivtlkvspekLrailedkekekkeekespasssaapaakaeskadnasdsnsatPa.egtPapssaamgpptekggpkkkagvKRsa 111
                 +rrks    +k i++lk+spe+L++++ + e+e+ ++ +s++s  + +++++ s+++n+  s+s tP   +tP++ss   +   +   +kkk  +KR++
  KHJ33058.1  10 SRRKS----TKGIIVLKLSPESLQKLQMKFEAERPNSIDSTTSIDQ-STTTSLSANENSQSSKSRTPDqPDTPTSSS-LLNLTDD---SKKK-NNKRTS 98 
                 34444....345***************9755555555666554444.444455889***********989****999.4444444...4445.79**99 PP

  INO80_Ies4 112 aaa..adgepaakvRgkPGPKKkarLeDGtideeae...raaaaahkLGPKAnqGaINAgLRALDRsGkPCRkWekkglqlksFTGvvweiprWrappk 205
                 + a  +++++a+k++gkPGPKKk +LeD t d+ ++   + ++++ kLGPKAnqGaINAgLRALDRsGkPCRkW+k++++lksFTGv weiprW+ap+k
  KHJ33058.1  99 NIAftSESSAASKAKGKPGPKKKSKLEDVTPDQISAtpkSYNTSTVKLGPKANQGAINAGLRALDRSGKPCRKWAKENFKLKSFTGVYWEIPRWKAPRK 197
                 98888888899********************998884433344599***************************************************** PP

  INO80_Ies4 206 kkp.....eeeeeesaaasaseegdssskenens..qvkseks 241
                 +k      ++ ++++++a  + +++ s+k+n+    +++s +s
  KHJ33058.1 198 SKLieagrDSPSSSDTKAYSQMDSEHSEKSNNITdiEMRSASS 240
                 9986332222333333333344445555555222345555555 PP

>> DHBP_synthase  3,4-dihydroxy-2-butanone 4-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   1.9e-06     0.011      43     101 ..      12      65 ..      10      94 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.9e-06
                    HHHB-S--EEEEEHHHHHHTT--BSSSS-SSTT---BB--EEESST-SSS-SHHHHHHH CS
  DHBP_synthase  43 irhasGlicvalteeradeLeLplmveenedkhktaftvsvdaaegttTGIsaaDRalT 101
                    ++ ++G+i + l++e +++L++++ +   e +++   t s+d +  ttT  sa++ ++ 
     KHJ33058.1  12 RKSTKGIIVLKLSPESLQKLQMKFEA---ERPNSIDSTTSIDQS--TTTSLSANENSQS 65 
                    6889******************9988...66778999*****97..********98775 PP

>> SIT  SHP2-interacting transmembrane adaptor protein, SIT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.2      0.54   3.2e+03      72      87 ..      50      65 ..      31      92 .. 0.61
   2 ?   -0.6   0.7       0.3   1.8e+03      73      83 ..      99     109 ..      56     146 .. 0.53
   3 ?    9.7   0.3   0.00018       1.1      66     104 ..     206     244 ..     200     248 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.54
         SIT 72 eekcyeqmkssaqrsq 87
                +++++++ +++ +++ 
  KHJ33058.1 50 DQSTTTSLSANENSQS 65
                4444444443333332 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.3
         SIT  73 ekcyeqmkssa 83 
                 + ++++ +s a
  KHJ33058.1  99 NIAFTSESSAA 109
                 33333333222 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00018
         SIT  66 tspesseekcyeqmkssaqrsqneveyvtmaplpreqis 104
                  sp+ss+ k+y+qm s+++++ n+   + m +++ + i+
  KHJ33058.1 206 DSPSSSDTKAYSQMDSEHSEKSNNITDIEMRSASSNMIC 244
                 6899****************************9999888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1082  (0.0603492); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 1924.82
//
Query:       KHJ33059.1  [L=218]
Description: hypothetical protein EV44_g3753 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       558  (0.0311228); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1591.43
//
Query:       KHJ33060.1  [L=554]
Description: hypothetical protein EV44_g2720 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-67  228.5   7.0    1.9e-67  227.8   7.0    1.4  1  Tti2       Tti2 family
  ------ inclusion threshold ------
      0.022   14.9   0.0       0.07   13.3   0.0    1.8  1  TetR_C_35  Bacterial Tetracyclin repressor,  C-terminal domai
       0.13   11.8   1.4        0.2   11.2   0.3    1.8  2  CLASP_N    CLASP N terminal


Domain annotation for each model (and alignments):
>> Tti2  Tti2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.8   7.0   3.2e-71   1.9e-67       1     281 []     157     447 ..     157     447 .. 0.94

  Alignments for each domain:
  == domain 1  score: 227.8 bits;  conditional E-value: 3.2e-71
        Tti2   1 vllalaaftdpedpwtteeaaqlatsileklls.qeseefesilekiLksklrplfsksspktpkitaaGrkaal.slplerfdeslsddesrkpWksg 97 
                 ++ +l aft+ +dpwtt+ + +la+++l+ ++    ++ef  i++++L s++rplfs+s+pk+  it++G++a    +p e  d+   + +s kpW+ +
  KHJ33060.1 157 IIISLLAFTSASDPWTTKVSLDLANRLLSIFRIeILKQEF--IMNSVLSSFIRPLFSSSKPKA--ITTSGYAAISsYTPREPYDFGAWNLTS-KPWRLD 250
                 6889***********************9988766677777..****************55555..********9976788888999999888.****** PP

        Tti2  98 dlkaisvlawiirqlqskeieanwplivPpiLnllDdtdtsvKlrGlklLqtlleklesskllkrtGLdsvfedallpcllyLPsltpeeeSlklLraa 196
                 +++++s+l+w+++q++++ i + ++l++PpiL llD+++ ++  +Glk+L+ +++kl  + ll++tGL+ v+eda++p llyLP++tp +eSl+lL+aa
  KHJ33060.1 251 NCYSLSILSWVVNQASQEVILSVFHLLIPPILILLDSPNAEMQFKGLKILDAFVQKLTPK-LLEQTGLGAVIEDAIHPILLYLPPITPLNESLSLLPAA 348
                 ******************99****************************************.************************************** PP

        Tti2 197 YpallsLaklefaekske..........rrklldkilregilsglsh...ases.prlvellleqlsevveelgistvkhLkrlipllseilsnPfita 281
                 ++  + L++++f+++ ++          + ++l+++lr+ i ++++h   +s+s p + +++l q++ +v++lg++++ hL+ l+ + ++ l +Pf+t+
  KHJ33060.1 349 FNSFFVLLEVRFSSSTSNdirrqdqakqKLTSLTRLLRQAIAPAYNHtsmSSDSdPIIKKIILAQIPPLVRALGVHSIAHLQTLLQIAEDSLLDPFATD 447
                 ************9766668889999999**********************88888*****************************************995 PP

>> TetR_C_35  Bacterial Tetracyclin repressor,  C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.2e-05      0.07       3      78 ..     386     484 ..     385     486 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.2e-05
   TetR_C_35   3 raairaavrafleeaaadpLvravltge......................akedLlpllTtdseplleaAsarlaevlaeswpqldeadae.vladavv 78 
                 r+ai+ a++++  ++++dp++++++ ++                      a++ Ll    tds p + aA + l+e++   wp+l+e++++  l++++v
  KHJ33060.1 386 RQAIAPAYNHTSMSSDSDPIIKKIILAQipplvralgvhsiahlqtllqiAEDSLLDPFATDSLPTMLAAIKALKEIVLCAWPRLSEERRRrELIRMMV 484
                 7899999999999999999999999999999999999999*********9***********************************99876514555544 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0      0.97   5.8e+03     101     126 ..      94     119 ..      89     127 .. 0.75
   2 ?   11.2   0.3   3.3e-05       0.2      25     110 ..     375     463 ..     369     464 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 0.97
     CLASP_N 101 kllgdtKkiisqnanqalaallsnas 126
                 + +    kii+ n+n  l++ lsna+
  KHJ33060.1  94 RIIFTASKIIRPNGNLFLSDKLSNAE 119
                 55556779999999999999999987 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 3.3e-05
     CLASP_N  25 eknilklrslikgn.vpedaveelle....clkqlleailkalssLrttlsstgchllkelaiqlkeq.ldpmveillptLlkllgdtKkii 110
                 ++++++l +l+++  +p  ++ ++ +    ++k   + il ++  L  +l  +++  l+ l+++ +++ ldp++   lpt+l  + + K+i+
  KHJ33060.1 375 KQKLTSLTRLLRQAiAPAYNHTSMSSdsdpIIK---KIILAQIPPLVRALGVHSIAHLQTLLQIAEDSlLDPFATDSLPTMLAAIKALKEIV 463
                 567899999999998888888888763333567...999***************************999********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3863.26
//
Query:       KHJ33061.1  [L=180]
Description: putative coenzyme q biosynthesis protein coq4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-77  258.6   0.0    4.2e-77  258.4   0.0    1.0  1  Coq4      Coenzyme Q (ubiquinone) biosynthesis protein Coq4


Domain annotation for each model (and alignments):
>> Coq4  Coenzyme Q (ubiquinone) biosynthesis protein Coq4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  258.4   0.0   2.3e-81   4.2e-77      52     220 ..       1     168 [.       1     169 [. 0.99

  Alignments for each domain:
  == domain 1  score: 258.4 bits;  conditional E-value: 2.3e-81
        Coq4  52 mlsdeeGrriLkerpritsetldleklkklpentlGraYakflekenvspdtRapvryiddeelaYvmqRyrevHDflHvllglptnvegEiavkafef 150
                 ml++++GrriL++rpri+set+ l++l++lpen++Gr+Ya++l++e+vspdtR++v+yiddee+aYvmqRyre+HDf+H+++glp+ vegEia+kafef
  KHJ33061.1   1 MLASPTGRRILRDRPRISSETICLSHLRNLPENSMGRTYAEWLDREGVSPDTRDQVKYIDDEECAYVMQRYRECHDFYHAITGLPVVVEGEIALKAFEF 99 
                 99************************************************************************************************* PP

        Coq4 151 aqtglpmallsalfgplrlsskererlleeylpwalragkkakellnvywEeeletdleelrkelgiekp 220
                 a+t +pm++ls lf+ +rl++k r+r++++y+pwa+++g   k+l+nvywEeele+d++ lrkelgi+kp
  KHJ33061.1 100 ANTLIPMTALS-LFAVTRLKPKARKRFWSIYFPWAIKNGIMGKDLINVYWEEELERDVDCLRKELGIQKP 168
                 ***********.*******************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1327.13
//
Query:       KHJ33062.1  [L=643]
Description: putative palmitoyltransferase erf2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-36  124.9   8.7    2.3e-36  124.9   8.7    1.7  2  DHHC      DHHC palmitoyltransferase


Domain annotation for each model (and alignments):
>> DHHC  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.1      0.75   1.4e+04      97     116 ..     339     351 ..     316     361 .. 0.47
   2 !  124.9   8.7   1.3e-40   2.3e-36       5     133 ..     433     559 ..     430     560 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 0.75
        DHHC  97 illlvlsllfllllgllllf 116
                  ++++ s++fl        f
  KHJ33062.1 339 SFIIIPSIMFL-------TF 351
                 22222222222.......22 PP

  == domain 2  score: 124.9 bits;  conditional E-value: 1.3e-40
        DHHC   5 lkfCstcniykpprskHcrvCnrcvlrfDHhCpwlnnciGerNykyFllfllylllllilalvlllialvklveeekkseflavtllkkllsilllvls 103
                 +k+C+tcni++p+r +Hcr+C++c+   DHhC+wlnnc+G+rNy+yF++f+ +++ll+++   ++l  ++++++ee++++ +a++ +k  + ++l+++ 
  KHJ33062.1 433 TKYCKTCNIWRPARGHHCRICDNCIETQDHHCVWLNNCVGRRNYRYFFTFVSTCFLLSLFLSGACLAQIIVYMNEEETNFGQAISHFK--IPFFLVLYG 529
                 79**********************************************************************************9998..89******* PP

        DHHC 104 llfllllgllllfhlylilrnlTtieamkk 133
                 ++++   ++l+ +hl+l+ r+ Tt+e++++
  KHJ33062.1 530 FIAFPYPAALTGYHLFLMGRGETTREYLNS 559
                 **************************9885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (643 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       858  (0.0478554); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 4695.39
//
Query:       KHJ33063.1  [L=586]
Description: putative set domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-14   52.9   4.6    5.4e-14   52.9   0.4    3.0  3  SET       SET domain
    1.6e-07   31.3   5.9    1.6e-07   31.3   5.9    2.7  3  AWS       AWS domain
  ------ inclusion threshold ------
       0.06   13.6   0.1       0.13   12.6   0.1    1.4  1  DUF5461   Family of unknown function (DUF5461)


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.41   2.5e+03     123     141 ..     213     242 ..      62     255 .. 0.52
   2 !   52.9   0.4   9.1e-18   5.4e-14       1     169 []     290     395 ..     290     395 .. 0.90
   3 ?   -0.9   0.1      0.31   1.8e+03      91     112 ..     448     483 ..     421     564 .. 0.44

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.41
                 GTTGGGCEEX...........SSSSEEEEE CS
                 xxxxxxxxxx...........xxxxxxxxx RF
         SET 123 gplarflNHs...........CdpNcnltv 141
                 + +  fl  s           Cd+Nc+ ++
  KHJ33063.1 213 WKVSKFLYSSsskcvcnpelgCDDNCQNRI 242
                 333344444444444333333566665554 PP

  == domain 2  score: 52.9 bits;  conditional E-value: 9.1e-18
                 SCEEEESSXBXTTXEEEEEE.ECCEECHHHHHHHHHH.......HTEEEEEXGGXXGGSXHHHHHHHTTSSHHHHHHHHHHHHHHHHHHTHHHHHHHXT CS
                 xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET   1 GrGvfAtedIpkgeficeyp.eeiiltkdeadksele.......aylfslpeapknlaftkelakasastllqklakdqkqaekedtdaalkasskaes 91 
                 G+Gv++t+ ++++++i+ey  e  i+t++e+d+++ e       +yl+s +                                                
  KHJ33063.1 290 GYGVRSTRCFEPNQIIVEYTgE--IITEEECDRRMREdyknndcHYLMSFD------------------------------------------------ 338
                 9*******************77..***********9998888888888877................................................ PP

                 TTSXXXHCCCCCHCCCHEEEETEEEEEECCCGTTGGGCEEXSSSSEEEEEEEE..TTSSEEEEEE.SSXBXTTEEEEEXTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxx.xxxxxxxxxxxxxxx RF
         SET  92 dlnaskpeagafsaiagysidaralksgngagplarflNHsCdpNcnltvqnv..lrgprvavfA.trdIkkGeEltidYg 169
                                 +++ida+   +g+ a    rf+NHsC+pNc  + + +   + pr+a+fA   +I  G+Elt+dY+
  KHJ33063.1 339 ---------------QSMIIDAT---KGSIA----RFVNHSCKPNC--RMVKWiiGGYPRLALFAgDEPIMTGDELTYDYN 395
                 ...............78899977...99999....***********..5555556**********558************7 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.31
                 TTTSX..............XXHCCCCCHCCCHEEEE CS
                 xxxxx..............xxxxxxxxxxxxxxxxx RF
         SET  91 sdlna..............skpeagafsaiagysid 112
                 + +++              +k+e gafs+ +++s+ 
  KHJ33063.1 448 KLKESsgdyaelespiskkRKTEVGAFSGVSCSSFS 483
                 333212222333334444444444444444444433 PP

>> AWS  AWS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   5.9   2.6e-11   1.6e-07       3      37 ..     230     265 ..     229     266 .. 0.89
   2 ?   -1.8   1.3      0.56   3.3e+03      24      30 ..     406     412 ..     404     415 .. 0.71
   3 ?   -4.6   0.5         3   1.8e+04      10      13 ..     502     505 ..     500     509 .. 0.74

  Alignments for each domain:
  == domain 1  score: 31.3 bits;  conditional E-value: 2.6e-11
         AWS   3 epsgcgsdCiNRmlliECteetCpcG.erCqNqrfq 37 
                 ++ gc+++C NR++++EC+   C  G  rC N++f+
  KHJ33063.1 230 PELGCDDNCQNRIMFYECDDSNCASGpSRCTNRPFA 265
                 679********************666389*****96 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.56
         AWS  24 tCpcGer 30 
                  C+cG++
  KHJ33063.1 406 KCRCGND 412
                 5999974 PP

  == domain 3  score: -4.6 bits;  conditional E-value: 3
         AWS  10 dCiN 13 
                 +C+N
  KHJ33063.1 502 GCLN 505
                 7888 PP

>> DUF5461  Family of unknown function (DUF5461)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   2.1e-05      0.13       8      82 ..      16      90 ..      11      94 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.1e-05
     DUF5461  8 kllqkyfkdkkiekilllpseedvkkdyiigrvgiirisktyiGivlvdGvki.pfvaevhlnnkidiyldprkdf 82
                + l k fk     kil  ++ ++++++  +  v + r+ k  +  +    + i p + e++ n+k+    +prk+ 
  KHJ33063.1 16 RYLNKLFKHAGNSKILEKCNIKKTENKLCV-SVPLSRELKNLTDTLEYAKIDIvPIIHEIWSNGKLVNGDYPRKKN 90
                7899*********************99999.9************99999998669***********9999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (586 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       690  (0.0384851); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 4135.08
//
Query:       KHJ33064.1  [L=429]
Description: putative set domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      8e-17   62.1   0.0    1.5e-16   61.3   0.0    1.4  1  SET       SET domain


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.3   0.0   8.2e-21   1.5e-16       1     169 []      30     284 ..      30     284 .. 0.78

  Alignments for each domain:
  == domain 1  score: 61.3 bits;  conditional E-value: 8.2e-21
                 SCEEEESSXBXTTXEEEEEEECCEECHHHHHHHHHH............................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................................................... RF
         SET   1 GrGvfAtedIpkgeficeypeeiiltkdeadksele............................................................... 36 
                 G+G++At+dI+++++i+++p+ ++ t+++ ++ +l                                                                
  KHJ33064.1  30 GMGIMATKDIRANTMILRVPHLALRTQNTVSQVVLDaikglqrisvhgllamdhifqnfrgtsnttatkltspagvaatpiaeycnidgggsndysdnn 128
                 89***************8887666666666666666*******************99999999999999999999999988766666666655555544 PP

                 ..........HTEEEEEXGGXXGGSX..........HHHHHHHTTSSHHHHHHHHHHHHHHHHHHTHHHHHHHXTTTSXXXHCCCCCHCCCHEEEETEE CS
                 ..........xxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET  37 ..........aylfslpeapknlaft..........kelakasastllqklakdqkqaekedtdaalkasskaesdlnaskpeagafsaiagysidara 115
                                          +          ++  +  +++  ++l  +q+q++++d++ a  a +             ++  ++a++ i++r+
  KHJ33064.1 129 ckpwhnvlpkF--------------SdiqecmplcwSASLQKLLPPISKRLLHKQRQKLQKDWNIASMAWPHL----------VYDNYLYAWLLINTRT 203
                 44444333220..............123333344457788888889999999999999999999999998855..........4455999999999666 PP

                 EEEECCC...............................GTTGGGCEEXSSSSEEEEEEEETTSSEEEEEESSXBXTTEEEEEXTT CS
                 xxxxxxx...............................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET 116 lksgnga...............................gplarflNHsCdpNcnltvqnvlrgprvavfAtrdIkkGeEltidYg 169
                 ++    a                                p+a+++NH+ +p +  +vq   + + +++ ++r++++ eE+ti+Yg
  KHJ33064.1 204 FYFILSAqsysgkshsrinssrdnnrgtsihrddcmalNPFADYFNHNFSPSA--SVQI--TKNAFEIHTLRNVNAQEEITICYG 284
                 666666666667777777888888888888999999*****************..7777..67*********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 3208.83
//
Query:       KHJ33065.1  [L=127]
Description: hypothetical protein EV44_g2238 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0037   17.0   0.1     0.0084   15.9   0.0    1.8  2  B12D      NADH-ubiquinone reductase complex 1 MLRQ subunit


Domain annotation for each model (and alignments):
>> B12D  NADH-ubiquinone reductase complex 1 MLRQ subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   4.7e-07    0.0084       1      31 [.      27      56 ..      27      95 .. 0.80
   2 ?   -2.2   0.0      0.21   3.8e+03      30      38 ..     106     114 ..     102     121 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.7e-07
        B12D  1 krpeliPLfvfigagvggavfylvRllltnP 31
                k+pel+ Lf+ ++++ g+a +y +R   t+P
  KHJ33065.1 27 KDPELWVLFGVMSGAFGLAGYYFARKP-TSP 56
                79***********************97.555 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.21
        B12D  30 nPDVrwnkk 38 
                  PDV++ k+
  KHJ33065.1 106 VPDVTLPKE 114
                 599998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.26s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1039.30
//
Query:       KHJ33066.1  [L=462]
Description: putative 2-dehydropantoate 2-reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-21   74.6   0.0    1.3e-20   73.8   0.0    1.4  1  ApbA_C    Ketopantoate reductase PanE/ApbA C terminal
    3.9e-11   42.8   0.0    7.4e-11   41.9   0.0    1.5  1  ApbA      Ketopantoate reductase PanE/ApbA
  ------ inclusion threshold ------
       0.19   12.0   0.0       0.37   11.0   0.0    1.5  1  TrkA_N    TrkA-N domain


Domain annotation for each model (and alignments):
>> ApbA_C  Ketopantoate reductase PanE/ApbA C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.8   0.0   2.2e-24   1.3e-20       4     125 .]     313     443 ..     310     443 .. 0.92

  Alignments for each domain:
  == domain 1  score: 73.8 bits;  conditional E-value: 2.2e-24
      ApbA_C   4 larweKllinaainpltalldckngellespelralvrallkEalavaeaeg........ve.lseerleeaveavlektaanrsSMlqDveagrktEi 93 
                  +++  l+i ++i++l++ +dc ng+ll +  + +l+r +l+E+  +  ++          + +s+e+le+++  +l + a + s Ml D++ag++t i
  KHJ33066.1 313 MKQLYNLAICTVIESLAVTFDCANGQLLYNYGVSNLMRLILEEIYLIVSSLPelrnikgvDAvFSPESLEKTIIGHLHRSAVTVSPMLVDLRAGKRTAI 411
                 56888999999*************************************666667777777446************************************ PP

      ApbA_C  94 dyinGavvklAeklgvetPvnellyellkale 125
                 d+  G++v++A+ l +++P n+++y+l++ ++
  KHJ33066.1 412 DFYTGYFVERANMLEIPCPINQMMYNLVRGKQ 443
                 ****************************9986 PP

>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.9   0.0   1.2e-14   7.4e-11       1     128 [.      80     240 ..      80     259 .. 0.84

  Alignments for each domain:
  == domain 1  score: 41.9 bits;  conditional E-value: 1.2e-14
                 EEEES-SHHHHHHHHHHHHHTHC..EEEE-SCH.HHHHHHHHCEEEEETT.CEEEEEECEEECCH.........................SCCCCS-ES CS
        ApbA   1 iailGaGaiGsllaakLakagad..vtlilrsr.rlealkknGlrltseg.geeilrppealsae.........................ekselepid 70 
                 i+i+G+G  G++la+++++  +   +tl+ +++  ++++ ++G  +++ + ++   ++   ++ +                         ++ ++  id
  KHJ33066.1  80 IHIIGMGPTGQYLAHNISQLDHAppITLLMHRPfMVQDWYNEGAAIQILRnNKISTQTGFDIE-PsvsfnrpspfkryhkngcvgdvelaKEPSDNVID 177
                 9****************99666668*************************4333333333333.25888899*****************999999**** PP

                 EEEE-SSGGGHHHHHHHHGGGECTCEEEEEESSSSCHHHHHTTTS.....TTSEEEEEEEE-E CS
        ApbA  71 lvivtvKayqteealeeikplldpntvvlllqNGlgheeelreal.....pkprvlggvtthg 128
                  +iv++    t  ale+i+++++p+t+v+++  G+g   +l + +      +p+ + g   h+
  KHJ33066.1 178 SLIVATACSVTIPALEPIQHRIKPTTTVCIIEKGMGIVYKLNKLFftdvkMRPTYILGNLNHQ 240
                 **************************************9999998776655556666655555 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   6.3e-05      0.37       2      42 ..      81     123 ..      80     140 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 6.3e-05
                 EEES-SHHHHHHHHHHHH.TT.EEEEEEESSHHHHHHHHHTTS CS
      TrkA_N   2 iiiGlGrvGrslaeeLse.gg.kdvvvidkdeerveelreegl 42 
                  iiG+G +G+ la+++s+ ++ +++++  +++  v+   +eg+
  KHJ33066.1  81 HIIGMGPTGQYLAHNISQlDHaPPITLLMHRPFMVQDWYNEGA 123
                 69****************9999779999999888888888874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (462 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3428.09
//
Query:       KHJ33067.1  [L=70]
Description: putative protein transporter sec61 subunit gamma [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-15   55.7   0.0    3.9e-15   55.5   0.0    1.1  1  SecE      SecE/Sec61-gamma subunits of protein translocation 


Domain annotation for each model (and alignments):
>> SecE  SecE/Sec61-gamma subunits of protein translocation complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.0   2.1e-19   3.9e-15       2      54 ..      14      66 ..      13      67 .. 0.94

  Alignments for each domain:
  == domain 1  score: 55.5 bits;  conditional E-value: 2.1e-19
                HCHHHHHHHHHCCCCCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHH CS
        SecE  2 kFfkevkaElkKVtWPtrkEllkttvvVlvfvvimglflflvDlvfskli.nll 54
                +F+ke  ++l+++t+P+ kE++k++ +V ++++img+++++v+l++ +++ n+l
  KHJ33067.1 14 EFIKEGSQFLNRCTKPDLKEFVKICQAVGIGFLIMGAVGYIVKLIH-IPVnNIL 66
                8********************************************9.**95555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.21s 00:00:00.55 Elapsed: 00:00:00.36
# Mc/sec: 575.60
//
Query:       KHJ33068.1  [L=887]
Description: putative dolichyl-phosphate-mannose-protein mannosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-78  261.9  17.3    5.5e-78  261.9  17.3    1.9  2  PMT       Dolichyl-phosphate-mannose-protein mannosyltransfer
    8.4e-69  231.2  15.2    8.4e-69  231.2  15.2    2.3  2  PMT_4TMC  C-terminal four TMM region of protein-O-mannosyltra
    1.9e-45  155.0   0.0    3.2e-45  154.3   0.0    1.3  1  MIR       MIR domain
  ------ inclusion threshold ------
        7.5    6.9   9.7       0.81   10.0   1.3    3.0  3  DUF2516   Protein of unknown function (DUF2516)


Domain annotation for each model (and alignments):
>> PMT  Dolichyl-phosphate-mannose-protein mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  261.9  17.3   1.2e-81   5.5e-78       3     244 ..      55     303 ..      54     304 .. 0.97
   2 ?   -2.1   1.3      0.51   2.3e+03     194     244 ..     679     726 ..     655     743 .. 0.59

  Alignments for each domain:
  == domain 1  score: 261.9 bits;  conditional E-value: 1.2e-81
         PMT   3 ltllallirlwrlslpnsvvfdevhfgkfasdYlehsffmdvhpplgkmllalggyLagkdgnftfesigaeyypenvpyvslRlfsallgslivplvy 101
                 +tlla++irl r+++p svvfdevhfg f+s+Y+++sffmdvhppl+k+ll l+g+Lag+dgnftf++ig +y    vpyv++R+++a++g+l+vp+ +
  KHJ33068.1  55 VTLLAIFIRLFRIYQPSSVVFDEVHFGGFVSKYIKGSFFMDVHPPLAKLLLTLAGWLAGFDGNFTFKEIGMDYIEPAVPYVAMRMLPAICGILTVPIIF 153
                 699*********************************************************************99989********************** PP

         PMT 102 ltllelgfskltallaallvllenslitlsryilldspLlfftllsmyclvkfe......rkapfsrswwlwllltgvalglavsvKwvglftvllvgl 194
                 ltl+  g   + a + a+l ++en+l+t++r+illdspL+f t+ +++ ++ f        k+ f   ww+wl++tgv+lg +vsvKwvglft+ +vg+
  KHJ33068.1 154 LTLKAAGCHTFSATMGAILITFENGLLTQARLILLDSPLVFMTTITVLAFISFSnqheqgPKKAFQPTWWFWLIMTGVGLGATVSVKWVGLFTIGWVGS 252
                 *****************************************************99999996677*********************************** PP

         PMT 195 lliwelwqllgdkslllksi.vkhllaralaliviPvtlylavftvhfwll 244
                 ++i++lw llgd    + +i  kh+lar+l+li+iPv +y+ +f +hf  l
  KHJ33068.1 253 ITIVQLWVLLGDVNNVSPRIfAKHFLARVLCLIIIPVSFYMMMFVIHFISL 303
                 ***********99999999989**************************876 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.51
         PMT 194 llliwelwqllgdkslllksivkhllaralaliviPvtlylavftvhfwll 244
                 + +i  l q +    +++ +i k++   +++   + + ++la  +v+fw++
  KHJ33068.1 679 YFAILALCQIFD---FSTNRIGKFVRRELIIIGRLGAIVFLALSFVAFWVY 726
                 444444444443...222233344444444444444444555555555544 PP

>> PMT_4TMC  C-terminal four TMM region of protein-O-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.4   6.2         4   1.8e+04      22     111 ..     215     301 ..     194     305 .. 0.55
   2 !  231.2  15.2   1.9e-72   8.4e-69       1     199 []     551     749 ..     551     749 .. 0.97

  Alignments for each domain:
  == domain 1  score: -5.4 bits;  conditional E-value: 4
    PMT_4TMC  22 shpyaSepyeWplllrgisywtkneekkqiyllGNpvlwwlstiallvfvllll.alllrrqrgvkdleeeetr....llnsglflllgwalhyl 111
                 +  ++ +++ W++++ g+ +         +  +G   + w+++i+++ +++ll+ ++ ++ +   k++    +r    +++ + f+++ +++h++
  KHJ33068.1 215 KKAFQPTWWFWLIMT-GVGLGAT----VSVKWVGLFTIGWVGSITIVQLWVLLGdVNNVSPRIFAKHF---LARvlclIIIPVSFYMMMFVIHFI 301
                 577777777777764.4444333....35667777777777777777666666433333333333332...222223455555577777777775 PP

  == domain 2  score: 231.2 bits;  conditional E-value: 1.9e-72
    PMT_4TMC   1 FlkkflelqkamltsnnalteshpyaSepyeWplllrgisywtkneekkqiyllGNpvlwwlstiallvfvllllalllrrqrgvkdleeeetr.llns 98 
                 F++kf+e+qk+m+++n++l+esh ++S+p +Wp+l+rgi++w+k+++  qiyl+GNpv+ww+st+a+l ++++ ++ +lr+qrg++d++    + + ++
  KHJ33068.1 551 FFAKFWEVQKVMWNTNAGLVESHAWDSRPSSWPILQRGINFWGKDHR--QIYLIGNPVIWWSSTLAILSYIAIKGIAILRWQRGYQDYNCVIFKrFDYE 647
                 99******************************************988..***************************************5555557**** PP

    PMT_4TMC  99 glflllgwalhylPfflmgRvlflhhYlpAllfailllaalldfllkslkkslkkk.klvklivvvvllvlviavFiffspltyGlpgtseevkklkwl 196
                 +++++lgwa+hy+Pf+lm+R+lflhhY+pAl+fail+l++++df ++++ k ++++  +++++ ++v+l+l++++F+++spl+yG+p+t+++++k k++
  KHJ33068.1 648 IGTIVLGWAFHYFPFYLMQRQLFLHHYFPALYFAILALCQIFDFSTNRIGKFVRRElIIIGRLGAIVFLALSFVAFWVYSPLAYGNPWTQSACRKAKLF 746
                 **********************************************999999977788999************************************** PP

    PMT_4TMC 197 ssW 199
                 +sW
  KHJ33068.1 747 DSW 749
                 *** PP

>> MIR  MIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.3   0.0   7.2e-49   3.2e-45       2     184 ..     350     527 ..     349     538 .. 0.94

  Alignments for each domain:
  == domain 1  score: 154.3 bits;  conditional E-value: 7.2e-49
         MIR   2 yLkggdvvRLfHshqdeyltiseqqqkqevflritlypsadaanssraLWeievvqkd............aw....rgglikwgkvyRlkHlaTgryLa 84 
                 yL         Hsh+ +y+t+s+qqq       itlyp++d++n     W +e+ +++            aw       ++k+g++++l Hl+Tgr+L+
  KHJ33068.1 350 YL---------HSHNLMYPTGSKQQQ-------ITLYPHKDENNI----WLLENMTQPldnkgrpingsqAWnnivPPVYVKNGDIIKLLHLQTGRRLH 428
                 55.........***************.......************....***************9999885554456789999999************* PP

         MIR  85 seeekksplseseddqkevsayglegfegd.nDk..veifekksttgmksaklvprdsyvrlqHvvtgcwLhstsvklkkekfekvqqkvicakekedk 180
                 s++  ++p++e+ d+q+evsayg+egf+gd nD   vei +k s+  +++ +++++++++rl+Hv+tgc+L+s++vkl+++  e  qq+v+cak ++ +
  KHJ33068.1 429 SHDI-RPPVTET-DWQNEVSAYGYEGFDGDaNDYfrVEIIKKLSKGEEAKVRIRTIQTKFRLIHVMTGCVLFSHKVKLPDWASE--QQEVTCAKGGTLP 523
                 ****.*****98.*****************8888**************************************************..**********999 PP

         MIR 181 eala 184
                 ++++
  KHJ33068.1 524 NSIW 527
                 9887 PP

>> DUF2516  Protein of unknown function (DUF2516)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.1       0.1   4.5e+02      47      88 ..      54     102 ..      50     106 .. 0.78
   2 ?   10.0   1.3   0.00018      0.81      13      82 ..     193     265 ..     182     270 .. 0.79
   3 ?   -3.5   0.2         3   1.3e+04      67      80 ..     704     717 ..     679     723 .. 0.52

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.1
     DUF2516  47 ailgvallvlll.......glfgalsllgliavvaalvYlvDVRPavre 88 
                 +++ +a+++ l+        +f ++++ g+++  + + +++DV P +++
  KHJ33068.1  54 GVTLLAIFIRLFriyqpssVVFDEVHFGGFVSKYIKGSFFMDVHPPLAK 102
                 3444455555559999998889999999*****************9987 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00018
     DUF2516  13 lvvlvlslvAlvdalrrradaFeaagkrtKpfWlailgvallvlll....glfgalsllgliavvaalvYlvDV 82 
                 ++++ ++++A++    + ++  + a + t +fWl+++gv+l +++     glf+ ++ +g i +v   v l DV
  KHJ33068.1 193 VFMTTITVLAFISFSNQHEQGPKKAFQPTWWFWLIMTGVGLGATVSvkwvGLFT-IGWVGSITIVQLWVLLGDV 265
                 567789999*****************************9988877754434332.4446667777777777777 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 3
     DUF2516  67 lgliavvaalvYlv 80 
                 l +i+   a+v+l+
  KHJ33068.1 704 LIIIGRLGAIVFLA 717
                 44666666666664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (887 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.22s 00:00:00.85 Elapsed: 00:00:00.37
# Mc/sec: 7210.10
//
Query:       KHJ33069.1  [L=394]
Description: putative rrm domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0015   18.3   0.0     0.0026   17.6   0.0    1.4  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   1.4e-07    0.0026      25      62 ..     141     179 ..     114     183 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 1.4e-07
                 EEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTE CS
       RRM_1  25 iksiklvrd.etgkskgfafVeFeskedAekAlealngk 62 
                  k+i+ +    +gkskg a VeF+s+ +A++ +++ +g 
  KHJ33069.1 141 LKEITFSEHkVNGKSKGQAWVEFTSQQAATAVKRKIDGF 179
                 37888888889***********************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       810  (0.0451782); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 2969.30
//
Query:       KHJ33070.1  [L=236]
Description: putative exosome-associated family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-16   59.2   0.5    4.7e-16   59.2   0.5    2.3  2  Sas10_Utp3  Sas10/Utp3/C1D family


Domain annotation for each model (and alignments):
>> Sas10_Utp3  Sas10/Utp3/C1D family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.5   2.6e-20   4.7e-16       1      87 []      10      88 ..      10      88 .. 0.91
   2 ?   -0.5   1.4      0.11   1.9e+03      34      34 ..     164     164 ..     127     218 .. 0.59

  Alignments for each domain:
  == domain 1  score: 59.2 bits;  conditional E-value: 2.6e-20
  Sas10_Utp3  1 leslsksldelqeslepllskakaeekkslsd..eklsegisllslKnelllaYllnlllylllklsgvelkdhpvvkeLvrlRvyleK 87
                le+l++++d+l+es +pll++       +l +  ++ +    l+++K+++l++Y++++l++++l+l+g+++++hpv+ eL+r+++y+eK
  KHJ33070.1 10 LENLDDEIDDLEESMAPLLQN-------TLLQaaSNFPV---LDKAKLYVLTTYAIESLIFSYLRLNGIKAQEHPVFLELTRVKQYFEK 88
                799*****************3.......44444455667...**********************************************9 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.11
  Sas10_Utp3  34 k 34 
                 +
  KHJ33070.1 164 Q 164
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1470  (0.0819901); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1708.54
//
Query:       KHJ33071.1  [L=841]
Description: putative cbs domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.2e-18   64.7   0.2    1.3e-17   64.0   0.2    1.3  1  DUF21     Cyclin M transmembrane N-terminal domain
  ------ inclusion threshold ------
      0.015   15.7   0.7       0.93   10.0   0.1    3.1  3  CBS       CBS domain
      0.016   14.6   2.0      0.023   14.1   2.0    1.2  1  DUF401    Protein of unknown function (DUF401)
       0.98    9.3   3.2       0.77    9.6   0.2    2.2  2  DUF2721   Protein of unknown function (DUF2721)


Domain annotation for each model (and alignments):
>> DUF21  Cyclin M transmembrane N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.0   0.2   2.9e-21   1.3e-17       1     169 [.      51     217 ..      51     227 .. 0.87

  Alignments for each domain:
  == domain 1  score: 64.0 bits;  conditional E-value: 2.9e-21
       DUF21   1 liivlllllsaffsgaEtAlvslsrlrleelaekgkkkakr....llkllknperlLstlligntlvnillsalatalfvellaegalavviatvivtl 95 
                 ++++ ll+++++  g+ +A+  l+++ l+ +  + ++k +     + ++ ++  ++L++l+i+   ++   + ++++lf           ++a++i t+
  KHJ33071.1  51 ILAITLLVIAGLSTGLILAICGLDQIWLHMKNITATPKERErirvITHMKSHGTWMLCSLVICSVACSEYFPFVVQSLFLGPP-------WVAILISTI 142
                 5788999*********************5555544433333235599999999*********************999976643.......4555566** PP

       DUF21  96 lilvfgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlil.esesepavseeelkklveeseee 169
                  i +f E++P+ +  +y++++  ++ p++  +m+l++ ++w++s++l  i   +++++++s +elk++++++e++
  KHJ33071.1 143 CITIFVELVPQFFIPAYPLTWGYYCRPMIWSCMWLTAIVSWPVSLFLSHISlITNDRSVFSNDELKTFIKYHEKS 217
                 ****************************************************99******************987 PP

>> CBS  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.14   6.3e+02      19      37 ..     290     308 ..     275     341 .. 0.78
   2 ?   10.0   0.1   0.00021      0.93       1      37 [.     353     389 ..     353     397 .. 0.86
   3 ?    0.6   0.1      0.17   7.8e+02      41      55 ..     468     482 ..     463     483 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.14
                 HHHHHHHHHHT..SSEEEEEE CS
         CBS  19 eealelmrekg..vsrlPVVd 37 
                  + +e++ + +  ++rlPV+ 
  KHJ33071.1 290 NDFMEKI-S-HwsYNRLPVIG 308
                 5677888.3.3379*****94 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00021
                 HHHHSBSSCEEEETTSBHHHHHHHHHHHTSSEEEEE.E CS
         CBS   1 VgdimtrdvvtvppdttleealelmrekgvsrlPVV.d 37 
                 V+d++ ++++ v+ ++++  +l+++ e+g+sr+ +V +
  KHJ33071.1 353 VRDLPLDPLPIVRVNMSVYALLNMF-ENGISRMAIViP 389
                 899999*******************.999****87643 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.17
                 BEEEEEEHHHHHHHH CS
         CBS  41 klvGivtlrDllral 55 
                 +++G+v l Dl++a+
  KHJ33071.1 468 EPIGLVALDDLISAV 482
                 589*********986 PP

>> DUF401  Protein of unknown function (DUF401)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   2.0   5.1e-06     0.023     273     366 ..      32     127 ..      27     151 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 5.1e-06
      DUF401 273 nsGvaeslaedvrlnlsapillilltllvGiatGieqaavsialPll.t.evtssgivvakylvlviaaaviGvilsPvhlcvvlsakyfevevfd 366
                   G+ +s+ ++ r+ +   il+i l +++G++tG+  a  ++    l + ++t++     +  v++ + + +  +l  + +c v  ++yf   v  
  KHJ33071.1  32 SEGIENSITTQHRYRIGLCILAITLLVIAGLSTGLILAICGLDQIWLhMkNITATPKERERIRVITHMKSHGTWMLCSLVICSVACSEYFPFVVQS 127
                 569999***********************************97544314267777778889999**************************877665 PP

>> DUF2721  Protein of unknown function (DUF2721)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.2   0.00017      0.77      45      90 ..      30      77 ..       5      87 .. 0.72
   2 ?   -0.5   0.4      0.24   1.1e+03      57      87 ..      90     118 ..      79     151 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00017
     DUF2721 45 e.deelakeiknlrr.Rarlirrailllvlsallvvlvvlllflsall 90
                  +e +++ i + +r R+ l+  ai+llv+++l + l+ ++  l+++ 
  KHJ33071.1 30 LsSEGIENSITTQHRyRIGLCILAITLLVIAGLSTGLILAICGLDQIW 77
                2256677777766555***********************999998776 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.24
     DUF2721  57 rrRarlirrailllvlsallvvlvvlllfls 87 
                 r+R+r+i+++   ++  ++ +v++++  + s
  KHJ33071.1  90 RERIRVITHMKSHGTWMLCSLVICSV--ACS 118
                 67888888888777654444444443..333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (841 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       789  (0.0440069); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.25s 00:00:00.92 Elapsed: 00:00:00.41
# Mc/sec: 6099.71
//
Query:       KHJ33072.1  [L=177]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1509.82
//
Query:       KHJ33073.1  [L=152]
Description: putative 40s ribosomal protein s15 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-32  111.7   0.1    1.6e-32  111.2   0.1    1.2  1  Ribosomal_S19  Ribosomal protein S19
  ------ inclusion threshold ------
      0.083   13.0   0.0       0.11   12.5   0.0    1.2  1  FliH           Flagellar assembly protein FliH


Domain annotation for each model (and alignments):
>> Ribosomal_S19  Ribosomal protein S19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.2   0.1   1.8e-36   1.6e-32       1      81 []      50     135 ..      50     135 .. 0.94

  Alignments for each domain:
  == domain 1  score: 111.2 bits;  conditional E-value: 1.8e-36
                    .HHHSS.TTCCCHHHHHHHHHH..TS-..----EEES-TT-B--GGGTT-EEEEE-SSSEEEEE--CCCTTSBCGGGT-SS----S CS
  Ribosomal_S19   1 rslkkg.pfvqesllkkvrkak..aek..kkevikthsRdstIlPemvgltvgVynGktfvpveikeemvGhkLgEFspTrkpvkh 81 
                    r++++g +++   l+kk+rkak  a++  k+  +kth+Rd++I+Pem+g+++g+y Gk+f+++++k+emvGh+LgEFs+++ pvkh
     KHJ33073.1  50 RRFNRGlKRKPMGLIKKLRKAKqeAQPneKPALVKTHLRDMIIVPEMIGSVIGIYSGKEFNQIDVKPEMVGHYLGEFSISYRPVKH 135
                    67899*99*************965333789999****************************************************9 PP

>> FliH  Flagellar assembly protein FliH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.3e-05      0.11      18      90 ..      29     101 ..      16     107 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.3e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHS--S-HHHHHHHHHHHHTTSCHHHS-EEEEE-HHHHHHHHHHHHHHH CS
        FliH  18 laeldeeledqlvqlaldiarkvikkelsvdpekilalvrealaklpvdekkitlrvnpdDlelvrehlgeel 90 
                 l++l +  +dql +++ + ar    + l+ +p+ +++ +r+a ++    ek + ++ + +D+ +v e +g+++
  KHJ33073.1  29 LDKLLDLTSDQLRDVVHARARRRFNRGLKRKPMGLIKKLRKAKQEAQPNEKPALVKTHLRDMIIVPEMIGSVI 101
                 5667777899*******************************************************99998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       531  (0.0296168); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 1260.43
//
Query:       KHJ33074.1  [L=288]
Description: putative 26s proteasome regulatory subunit multiubiquitin chain binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-26   91.6   0.0    9.6e-26   90.5   0.0    1.6  1  VWA_2     von Willebrand factor type A domain
    5.1e-08   33.0   0.0    7.5e-08   32.4   0.0    1.2  1  Ssl1      Ssl1-like
  ------ inclusion threshold ------
      0.021   14.7   1.1      0.021   14.7   1.1    1.8  2  UIM       Ubiquitin interaction motif
      0.097   12.5   2.9       0.61    9.9   0.2    2.3  2  NOP19     Nucleolar protein 19


Domain annotation for each model (and alignments):
>> VWA_2  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.5   0.0   2.1e-29   9.6e-26       1     105 [.       6     117 ..       6     119 .. 0.95

  Alignments for each domain:
  == domain 1  score: 90.5 bits;  conditional E-value: 2.1e-29
       VWA_2   1 lvfvlDtSgSmrngdygptrleaakdaveallksl....pgdrvglvtfsd.gpevlipltkdkakilnalrnleak.gggtnlaaaLqlarkalkkrr 93 
                 +++++D+S+S rngdy+ptr+ea+ dav+ +++++    p++ +gl+++++ gpevl++lt+d++kil+ l++++   +g+++la+++q a  alk+r+
  KHJ33074.1   6 VMVIVDNSESSRNGDYTPTRFEAQCDAVSLIFSAItqanPESSMGLLSMGGrGPEVLVTLTTDHGKILEGLHRTKSNiRGDSHLATGVQIAGLALKHRQ 104
                 79**************************999995555658***********88**********************99********************** PP

       VWA_2  94 .kgekrvivlitD 105
                  k+++++i+++t+
  KHJ33074.1 105 nKSQRQRIIVFTC 117
                 ***********97 PP

>> Ssl1  Ssl1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.0   1.7e-11   7.5e-08       1     134 [.       9     142 ..       9     148 .. 0.93

  Alignments for each domain:
  == domain 1  score: 32.4 bits;  conditional E-value: 1.7e-11
                 EEE-SGGGGSSSSSS-HHHHHHHHHHHHHHHHHHHSTT-EEEEEEEETTEEEEEEEEES-HHHHHHHHHHHTTS---S---HHHHHHHHHHHHSSS-TT CS
        Ssl1   1 vlDlsrameekdlkpsrlavviklleefveeffdqnPisqlgliavkdkkaekltelsGnprkhikaLkslreveakgepsLqnaLelalasLkkvpsh 99 
                 ++D s++  + d  p+r++ +  +++   +   + nP s +gl+++  +  e l +l+ +  k ++ L+  +  +++g++ L  ++++a   Lk+    
  KHJ33074.1   9 IVDNSESSRNGDYTPTRFEAQCDAVSLIFSAITQANPESSMGLLSMGGRGPEVLVTLTTDHGKILEGLHRTK-SNIRGDSHLATGVQIAGLALKHRQNK 106
                 68******************************************************************9887.99************************ PP

                 SEEEEEEEE-.SS----SS-HHHHHHHHHHTT-EEE CS
        Ssl1 100 asrevliifs.slstcDPgdiyetidelkkekirvs 134
                 ++r  +i+f+ s    D   ++++ +++kk+++ + 
  KHJ33074.1 107 SQRQRIIVFTcSPIREDEKTLVSLAKKMKKNNVSID 142
                 ***999998626678899999999999999998765 PP

>> UIM  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   1.1   4.7e-06     0.021       3      16 ..     222     235 ..     222     235 .. 0.94
   2 ?   -4.9   2.4         4   1.8e+04       1       5 [.     263     267 ..     263     267 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 4.7e-06
         UIM   3 dedLqrAlalSlqE 16 
                 d +L++Al++S++E
  KHJ33074.1 222 DPELALALRMSMEE 235
                 789**********9 PP

  == domain 2  score: -4.9 bits;  conditional E-value: 4
         UIM   1 dEded 5  
                 +Ede+
  KHJ33074.1 263 EEDEQ 267
                 68987 PP

>> NOP19  Nucleolar protein 19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.2   0.00014      0.61      95     136 ..      95     138 ..      82     141 .. 0.82
   2 ?    2.6   0.3     0.025   1.1e+02      13      55 ..     225     264 ..     222     285 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00014
       NOP19  95 vsslakkkkkkeksskrnsiyrvs..kddtkamvaLkrkmrkee 136
                 +  la k+++++++++r  ++  s  ++d k++v+L +km+k++
  KHJ33074.1  95 IAGLALKHRQNKSQRQRIIVFTCSpiREDEKTLVSLAKKMKKNN 138
                 666777888888888888888887779**************987 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.025
       NOP19  13 LqaklqlsfsknnakvlsWleeseeekssssedkeeledskka 55 
                 L   l++s+++++a+v +  ++++e++ +++ + e ++   ++
  KHJ33074.1 225 LALALRMSMEEEKARVEKTKKDQAEAEAKEKAKLEGIK---EE 264
                 55678999999999999877777777776664444333...33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1252  (0.069831); expected 358.6 (0.02)
Passed bias filter:                      625  (0.0348597); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2123.71
//
Query:       KHJ33075.1  [L=112]
Description: putative ribosomal protein 60s [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.1e-26   90.4   9.6    9.3e-26   90.2   9.6    1.0  1  Ribosomal_60s  60s Acidic ribosomal protein
  ------ inclusion threshold ------
       0.15   12.4   0.0       0.26   11.7   0.0    1.4  1  EF-hand_14     EF-hand domain


Domain annotation for each model (and alignments):
>> Ribosomal_60s  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.2   9.6     1e-29   9.3e-26       1      88 []      17     111 ..      17     111 .. 0.86

  Alignments for each domain:
  == domain 1  score: 90.2 bits;  conditional E-value: 1e-29
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XX--SS--STTT CS
  Ribosomal_60s   1 eptaenikkvlkaagveveaarvkllvkalegkdieellangaakla.......aaaaaaaaaaaaaaaaaaaeekkkeeeeeEeedddmGfgLF 88 
                    +p++++i+kvl ++g+e++++rv+ l+++legkdi+el+a+g++kla       ++a+a+ aa+aa +aaa+++ ++keee+eEe+d+dmGfgLF
     KHJ33075.1  17 SPSKDDITKVLASVGIEADNERVAKLITELEGKDINELIAEGSTKLAsipsggsGGASAGGAASAAPGAAAEEKVEAKEEEKEEESDEDMGFGLF 111
                    599*************************************************99555666666666666666666666666669*********** PP

>> EF-hand_14  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.9e-05      0.26      19      50 ..      20      51 ..      10      64 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.9e-05
  EF-hand_14 19 vakllkaLaetGirkdDpRLkellkklkkvek 50
                  +++k+La++Gi+ d  R+++l+++l+  + 
  KHJ33075.1 20 KDDITKVLASVGIEADNERVAKLITELEGKDI 51
                56789*********************987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       793  (0.04423); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 832.89
//
Query:       KHJ33076.1  [L=512]
Description: hypothetical protein EV44_g5112 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0071   15.8   0.5      0.017   14.5   0.5    1.5  1  DUF5305         Family of unknown function (DUF5305)
  ------ inclusion threshold ------
      0.037   13.1   0.1        0.2   10.7   0.0    1.9  2  Glyco_hydro_88  Glycosyl Hydrolase Family 88
       0.08   11.3   1.5       0.12   10.7   1.5    1.3  1  SID-1_RNA_chan  dsRNA-gated channel SID-1


Domain annotation for each model (and alignments):
>> DUF5305  Family of unknown function (DUF5305)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.5   2.8e-06     0.017      84     149 ..      67     135 ..      64     143 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.8e-06
     DUF5305  84 eqtyeikkdetdeengeitetvtvkespslae...gilliilgllaliglvvlirriiftssk.aekyel 149
                 e t+ i+k  +++++++i+etv+ ++++  +    +il++++++++l+ l +l++r  ++ ++ ++   +
  KHJ33076.1  67 EPTTFISKIVSSNDSQTIHETVRSTQEEISLTtpfIILVVLFIFISLLSLLFLFWRR-KKAKNfETSLVK 135
                 67888999999999******997655443333488*********************4.444442333333 PP

>> Glyco_hydro_88  Glycosyl Hydrolase Family 88
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   3.3e-05       0.2     212     258 ..      23      70 ..      20      86 .. 0.85
   2 ?   -0.6   0.0     0.088   5.3e+02     288     334 ..     256     297 ..     239     302 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 3.3e-05
                     -TTHHHHHHHHHHHHHHHHCTS-..TTSSEBSBTT-TTTTSSBEHHHHH CS
  Glyco_hydro_88 212 ekarqelinllrdlvkalaklqd..eeglWhqilddgskesylEtSata 258
                     ++a +el +++ + ++ lak+qd  ++glW+ i  +++  ++ ++  t 
      KHJ33076.1  23 YPAHDELFQIFHQRCSGLAKCQDnnQNGLWRIIRSRSD-FNSTSSEPTT 70 
                     67899******************9999***99988888.6666665555 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.088
                     HHHHCEE-TTS-EEE-SEETS--SCTCHHHHTS-EESS-HHHHHHHH CS
  Glyco_hydro_88 288 allkkaveedGqllvkqvsvgtgiggddyYksvdvnsiedygvgafl 334
                      +lk  +++d+   ++  s +t+  ++d+Y  ++++++e++    +l
      KHJ33076.1 256 TILKY-SSDDAD--LSLLSKETS--DKDFYSDKPRSEVEKFKSSSIL 297
                     55666.677777..666677777..559**********999766655 PP

>> SID-1_RNA_chan  dsRNA-gated channel SID-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.5     2e-05      0.12      97     149 ..      75     189 ..      27     307 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 2e-05
  SID-1_RNA_chan  97 tknsnrtkkvtvevkklikksvyvvavllvllvllsfllltllvvivekvre........................................... 148
                     + +sn +++++ +v ++ ++  ++ + ++++++++ + ll+ll++++ +++                                            
      KHJ33076.1  75 IVSSNDSQTIHETVRSTQEEISLTTPFIILVVLFIFISLLSLLFLFWRRKKAknfetslvkkeeiiedrslslestllshnriseesnessarpk 169
                     5567888899999999999999*************************877665444444444444444444444444444444444444444444 PP

  SID-1_RNA_chan 149 ...................s 149
                                         
      KHJ33076.1 170 lspvthkdtlildiekeliV 189
                     44444444444444444440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1176  (0.0655921); expected 358.6 (0.02)
Passed bias filter:                      731  (0.0407719); expected 358.6 (0.02)
Passed Vit filter:                        82  (0.0045736); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.24s 00:00:00.86 Elapsed: 00:00:00.38
# Mc/sec: 4040.81
//
Query:       KHJ33077.1  [L=313]
Description: putative chromatin spt2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-05   23.0  34.4    8.7e-05   23.0  34.4    3.0  2  SPT2      SPT2 chromatin protein


Domain annotation for each model (and alignments):
>> SPT2  SPT2 chromatin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.4     0.099   1.8e+03      33      54 ..      47      65 ..      16     110 .. 0.67
   2 !   23.0  34.4   4.9e-09   8.7e-05      28     111 .]     220     301 ..     137     302 .. 0.66

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.099
        SPT2 33 eeerrryarseIwaifnkdkk.k 54
                 +    + r+ I++ ++ +k+ +
  KHJ33077.1 47 TS----KPRNAIRKTMSLGKSeT 65
                22....47788888888887731 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 4.9e-09
        SPT2  28 ddeeeeeerrryarseIwaifnkdkkkyesrddaesddddrdMEangaeieeEErrSariArkEDeeEeerekreeeekkkrkk 111
                 +++++ + rr + +   ++ ++ d ++y++ +d+  ++d +dMEa+  e+ eEE+ +a+iAr+ED+e++++e+r ++ek++++k
  KHJ33077.1 220 SSKKDLDIRR-SSSRSMNRYLSEDEEEYDE-EDQYYESDLSDMEADTFEVDEEEEIAAKIARREDAEALAEENRLKREKEAKRK 301
                 2223332222.3444444445555553444.3333344478**************************************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1805  (0.100675); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 2363.93
//
Query:       KHJ33078.1  [L=354]
Description: hypothetical protein EV44_g0911 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-18   66.5   3.1    2.6e-18   65.4   3.1    1.7  1  Nbl1_Borealin_N  Nbl1 / Borealin N terminal


Domain annotation for each model (and alignments):
>> Nbl1_Borealin_N  Nbl1 / Borealin N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4   3.1   1.5e-22   2.6e-18       1      55 [.      57     111 ..      57     113 .. 0.98

  Alignments for each domain:
  == domain 1  score: 65.4 bits;  conditional E-value: 1.5e-22
  Nbl1_Borealin_N   1 kkealLenfdlEveeRirrlraelelllktlrnrfelellriPkavRkmtmkell 55 
                      +k+al++n++lE+ eR+rrlra+++l+++ lr+r e++++riP avR ++m++ll
       KHJ33078.1  57 QKRALIQNLQLEIMERARRLRAQYALQAQGLRTRVEIRVNRIPVAVRRLKMGDLL 111
                      899**************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2689.48
//
Query:       KHJ33079.1  [L=197]
Description: putative translation machinery-associated protein 22 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-23   81.7   0.2    8.7e-23   80.7   0.2    1.5  1  SUI1      Translation initiation factor SUI1


Domain annotation for each model (and alignments):
>> SUI1  Translation initiation factor SUI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.7   0.2   4.9e-27   8.7e-23       2      74 ..     101     175 ..     100     177 .. 0.94

  Alignments for each domain:
  == domain 1  score: 80.7 bits;  conditional E-value: 4.9e-27
        SUI1   2 kpkihirleqrggrKkvTtvsgleafgidlkklakelkkkfacsgsvvk..dggeeiqvQGdqrkkvaelLteky 74 
                  +k++i++ +r++rK+vT+v gleaf ++ k++ak++ kkfa+++sv+k  +ggeei+vQGd +++++e++ eky
  KHJ33079.1 101 SSKVTIKRVERSKRKYVTVVIGLEAFSLENKRVAKDFGKKFATGSSVTKtaSGGEEIVVQGDLSEEIEEFILEKY 175
                 579********************************************9976557******************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1452  (0.0809861); expected 358.6 (0.02)
Passed bias filter:                      692  (0.0385967); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 1535.45
//
Query:       KHJ33080.1  [L=134]
Description: hypothetical protein EV44_g3539 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       331  (0.0184617); expected 358.6 (0.02)
Passed bias filter:                      230  (0.0128284); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.36
# Mc/sec: 1117.66
//
Query:       KHJ33081.1  [L=854]
Description: putative phosphate metabolism protein 7 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-88  296.3  20.4      2e-88  296.3  20.4    2.5  3  RSN1_7TM  Calcium-dependent channel, 7TM region, putative pho
    1.1e-39  135.7   2.6    1.1e-39  135.7   2.6    2.6  4  RSN1_TM   Late exocytosis, associated with Golgi transport
    3.7e-33  115.2   0.1    7.5e-33  114.2   0.1    1.5  1  PHM7_cyt  Cytosolic domain of 10TM putative phosphate transpo
    3.8e-22   78.3   0.2      3e-21   75.4   0.1    2.2  2  PHM7_ext  Extracellular tail, of 10TM putative phosphate tran


Domain annotation for each model (and alignments):
>> RSN1_7TM  Calcium-dependent channel, 7TM region, putative phosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.29   1.3e+03      47      76 ..      12      41 ..       5      45 .. 0.79
   2 ?   -2.9   1.3      0.73   3.3e+03     165     165 ..     116     116 ..      68     181 .. 0.52
   3 !  296.3  20.4   4.5e-92     2e-88       1     274 []     396     668 ..     396     668 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.29
    RSN1_7TM 47 kkllsvvtgllPtlllslllallpiilrll 76
                +++++++++l+Pt+++s +++ + ++lr++
  KHJ33081.1 12 TTVSALLATLIPTAITSAVYIGIFLVLRRS 41
                344589999999999999999999998886 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.73
    RSN1_7TM 165 l 165
                 l
  KHJ33081.1 116 L 116
                 2 PP

  == domain 3  score: 296.3 bits;  conditional E-value: 4.5e-92
    RSN1_7TM   1 rklivtlllvlliifwiipvafvgllsnletltkvlpflkkilelskkllsvvtgllPtlllslllallpiilrllsklqGalsrselelsvvskyfaF 99 
                 rk++v  ++  liifw+ipv fvgl+sn+++l+  +++l+++ ++++ +++++tgllP+++l+ll++l+pii+r+l k++G +s +++el ++++yfaF
  KHJ33081.1 396 RKIAVIGIISGLIIFWAIPVGFVGLVSNVNYLKT-YSALSWLDQIPDVIMGIITGLLPAVALALLMSLVPIIIRVLGKIAGEPSLARVELFTQNAYFAF 493
                 7899****************************99.8*************************************************************** PP

    RSN1_7TM 100 lvvnvFlvftlagtalslleeiidnptsipkllaeslpkasnFfityillqglagaaleLlqlvklilflikrkflsktprdlaerytkppsfdygtey 198
                 +v++vF+v t+a++a++l+++ id+p+si ++la+++pkasnF+i+y+++qgl++a++ + q+v++++f i +k++s tpr l+e++ +++s+++g+++
  KHJ33081.1 494 QVIQVFIVATVASAATALVKQAIDHPESITTTLATKIPKASNFYISYFIVQGLTVASGVISQVVGFLVFSILYKYFSGTPRALYEKWATLSSVSWGSVM 592
                 *************************************************************************************************** PP

    RSN1_7TM 199 pkvllifvialiYsviaPlilpfaliyfllgylvykyqllyvydtkyesgGklwpralnrllvglvlfqllliglf 274
                 p++++++vi+++Ys+iaPlil fa+i ++l yl+y+y++l+v+d++ +++G ++pral++ll+g++l++ +liglf
  KHJ33081.1 593 PVLTNVAVIGITYSCIAPLILGFATIGMSLFYLAYRYNILFVTDSNVDTKGLIYPRALQHLLTGIYLAEACLIGLF 668
                 **************************************************************************98 PP

>> RSN1_TM  Late exocytosis, associated with Golgi transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.7   2.6   2.4e-43   1.1e-39       2     156 .]      17     169 ..      16     169 .. 0.97
   2 ?   -2.2   0.7      0.71   3.2e+03      95     142 ..     496     544 ..     485     568 .. 0.63
   3 ?   -3.0   0.1       1.2   5.4e+03       9      26 ..     551     568 ..     541     579 .. 0.64
   4 ?   -3.7   0.4       2.1   9.2e+03       5      23 ..     671     689 ..     668     695 .. 0.64

  Alignments for each domain:
  == domain 1  score: 135.7 bits;  conditional E-value: 2.4e-43
     RSN1_TM   2 lltslvinlvlalvflllFlilRkknkrvYaprtylkg..eeertpplpqkglfgWipallkisdeeilekaGLDayvflrflkmlikiflvlavlali 98 
                 ll++l++++++++v++ +Fl+lR++++r+Yap+tyl +  e+ert+plp +g++ Wi ++ ki+d   l++++LDay+flrflk+ + +++v+++++++
  KHJ33081.1  17 LLATLIPTAITSAVYIGIFLVLRRSQNRFYAPKTYLGTlrEDERTEPLP-NGWLDWISSFTKIPDYAALKSQSLDAYLFLRFLKITVVVMFVGVLITWP 114
                 799*********************************99*999*******.************************************************* PP

     RSN1_TM  99 vLlPvnatggegedskesksgldklsisnvs...egsnrlwahvvvayiftglvlyllyre 156
                 +L+Pv++tgg ++       +ld+ls+sn++   +g++r++a+++va+if+ +vlyl++re
  KHJ33081.1 115 ILFPVYITGGFHS------GQLDMLSMSNINksgSGKHRYYATTFVAWIFFSFVLYLVTRE 169
                 **********999......58*********98777888********************987 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.71
     RSN1_TM  95 lalivLlPvnatggegedskesk.sgldklsisnvsegsnrlwahvvva 142
                 + ++++  v  + ++  ++  ++ +++++   +++++ sn+++ +++v 
  KHJ33081.1 496 IQVFIVATVASAATALVKQAIDHpESITTTLATKIPKASNFYISYFIVQ 544
                 4455555555555555555555556666666777777777777666654 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 1.2
     RSN1_TM   9 nlvlalvflllFlilRkk 26 
                  ++  +v +l+F+il k 
  KHJ33081.1 551 GVISQVVGFLVFSILYKY 568
                 445556667777776554 PP

  == domain 4  score: -3.7 bits;  conditional E-value: 2.1
     RSN1_TM   5 slvinlvlalvflllFlil 23 
                 s++i  ++ + ++l+F il
  KHJ33081.1 671 SAAIGPIVLMSLFLIFTIL 689
                 5555566666777777766 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.2   0.1   1.7e-36   7.5e-33       1     175 [.     192     384 ..     192     385 .. 0.90

  Alignments for each domain:
  == domain 1  score: 114.2 bits;  conditional E-value: 1.7e-36
    PHM7_cyt   1 srTvlvtgiPkelrseeklkeffeelypgkvvesvqivrdvkkldklveerekavrkleaalskykkngkklpkkr....................... 76 
                 +rTvl+t++P ++r+e kl+++f ++     v++v+i++d +++d+lv er++++ +le  + k++k ++++ + +                       
  KHJ33081.1 192 ARTVLFTSVPAKYRDESKLRQIFGSC-----VKKVWITKDSSEVDDLVSERDDLLLRLESSEVKLIKIANTE-RLKinkkkagddnsssevaapvpasl 284
                 69*********************875.....6**********************************999865.34467889****************** PP

    PHM7_cyt  77 ..........pthklgflglkligkkvdaidyyrekleeldeeieeerekv...kkkplgaaFvtfesersaaavakqakcaaqiqqssnptl.kpkkw 161
                           pthklg++g  l+g+kvd+i+++r++le+l +  +++++ +   +++++g++F++f+ +++a+a++       q  ++++  + +pk +
  KHJ33081.1 285 vdywvpenkrPTHKLGLFG--LVGQKVDTIKWCRNRLESLIPAAKAAQTAYkseEANKTGSVFIEFNLQSEAQAAF-------QSLSHHQALQmSPKFI 374
                 *****************99..89**************************994333357***************996.......4555666666689999 PP

    PHM7_cyt 162 tvelAPePrDviWe 175
                  ++    P++viW+
  KHJ33081.1 375 GIN----PNEVIWS 384
                 998....******8 PP

>> PHM7_ext  Extracellular tail, of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.31   1.4e+03      44      58 ..     216     230 ..     197     236 .. 0.80
   2 !   75.4   0.1   6.6e-25     3e-21       1      92 [.     752     846 ..     752     847 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.31
    PHM7_ext  44 skepllWiprDpagv 58 
                 s   ++Wi +D+  v
  KHJ33081.1 216 SCVKKVWITKDSSEV 230
                 667899*****8665 PP

  == domain 2  score: 75.4 bits;  conditional E-value: 6.6e-25
    PHM7_ext   1 FlkpeiyasyaalrkllpeeyneeeeeyeeelekkaYlhPavtskepllWiprDpagvSkqeieetekvigisdegaeldekgkvew...teaPp 92 
                 Fl+p+i+++y++ r+++p+ + ++   y++ ++++aYl+ +v+s++ llWip+D +g+S++e++ ++k+++i+++ga++++++k+ew    ++Pp
  KHJ33081.1 752 FLNPHIHSNYEHFRQIFPQCDLDPRYLYDQVVADEAYLPLSVKSQPILLWIPKDTIGISDEEVAIIDKITPITNDGATISDDNKIEWnpeGSRPP 846
                 9***********************9999***********************************************************99877887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (854 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       964  (0.0537676); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.39
# Mc/sec: 6603.40
//
Query:       KHJ33082.1  [L=128]
Description: putative alpha-mannosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-05   25.0   0.0    2.5e-05   24.2   0.0    1.4  1  COA2      Cytochrome C oxidase assembly factor 2


Domain annotation for each model (and alignments):
>> COA2  Cytochrome C oxidase assembly factor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   1.4e-09   2.5e-05      10      66 ..       9      62 ..       4      77 .. 0.72

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1.4e-09
        COA2 10 krklvnllfgttaliatatviipsllPCPamknpyldtdsdPaveelpenskvivid 66
                k +l   lf tt + ++  v++p +lPCPa k p    + d +++    n k  +  
  KHJ33082.1  9 KSRLTSSLFATTLFASFFVVVLPHILPCPASK-PVA-FNDDGTLRT-SSNRKCRIQS 62
                6678899999999999***************9.543.333344444.5666655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       466  (0.0259914); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 997.30
//
Query:       KHJ33083.1  [L=994]
Description: putative oxysterol-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   5.1e-112  374.4   0.0   1.4e-111  373.0   0.0    1.8  1  Oxysterol_BP  Oxysterol-binding protein
    1.2e-34  118.4   0.1    1.2e-34  118.4   0.1    2.6  3  PH_8          Pleckstrin homology domain
    2.7e-07   31.1   0.9    2.3e-05   24.8   0.0    3.1  3  PH            PH domain
  ------ inclusion threshold ------
      0.066   13.6   2.3        6.2    7.3   0.9    3.8  2  PH_11         Pleckstrin homology domain


Domain annotation for each model (and alignments):
>> Oxysterol_BP  Oxysterol-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  373.0   0.0  3.1e-115  1.4e-111       1     373 []     615     978 ..     615     978 .. 0.94

  Alignments for each domain:
  == domain 1  score: 373.0 bits;  conditional E-value: 3.1e-115
                   HHHCCHTTSTT-BCCCS---GGGEEEEEHHHHHHHCCTTCHHHHHHHC.SSHHHHHHHHHHHHHHCCCGCT..STSSSEEE---TT-EEEEEETT.. CS
  Oxysterol_BP   1 slwsilkkciGkDLskislPvffneplSlLqrlaedleyselLdkaakeddsleRlayVaaFalSsyasti..krrlkKPFNPlLGEtfelvred.. 93 
                   sl+ +l+k++GkDLs+is+P++ nep+SlLqr+ae++ey++lLdka++++++ +Rl+yV aFa+S+++ ++  +r+l+KPFNP+LGEtfel r +  
    KHJ33083.1 615 SLIGFLRKNVGKDLSTISMPISANEPTSLLQRIAEQFEYAQLLDKAVSQTNPDHRLCYVSAFAISNFSINRckERALRKPFNPMLGETFELLRTEhe 711
                   6999******************************************************************99999******************5559 PP

                   ..CEEEEEEEEEETTTTEEEEEEEECTEEEEEEEEEEEEE-SSEEEEEE-SEEEEEE..EEESEEEEEEE--EEEEE-TTTTS-EEEEEEEEEEEET CS
  Oxysterol_BP  94 ..kgfrfiaEQVsHhPpvsAfhaesegweldgeikvkskflgkslevkpeGtahlel..lkksgehYtwtkpttivhniivgklwvelsgeveitnh 186
                     +gfrf+aE+VsH+P  +A+ a+s +w+++++ ++++kf+gks+e+++eG ++l l   + ++e Y+w+ ++++++n+++g++++e +g+++++n+
    KHJ33083.1 712 vpSGFRFLAEKVSHRPVRIACQADSVYWSINQTAAPTNKFWGKSAEIITEGRVRLALhlSDGRDELYSWSVASCFLRNVVLGEKYIEPVGTTTVVNE 808
                   9*****************************************************999644779********************************** PP

                   TT--EEEEEEE---SSS---SSEEEEEEEE.TTS-EEEEEEEETTTEEEEEETTSTTS--EEEEETT-BSXXGCGSSTTBCCCCCCH---.--...G CS
  Oxysterol_BP 187 stgdkakleFkkkglfsskksnkvegkvkd.kkkevlyeisGkwdeelyikkkktekkeeeedasekskvkekeeqeefeseklWkaspl.pkaeey 281
                   stg +a +eFk kg+f+ ++s++ve+k+   + k++ +++ G+w+++l i  +  +                     ++++  +W+  +l + a++ 
    KHJ33083.1 809 STGANAFIEFKHKGMFG-GRSEDVEVKINGsDGKSTGISLIGTWTNSLRI--VGPG---------------------KSSDSEIWHVGELvEGATKR 881
                   ****************5.89********9735568899************..4443.....................3467889******999999* PP

                   GG--HHHHCCT---.TT.GGS-TTBGGG-HHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHCCTT.----SSEEEEETTTTSSCEEEC...-S-HHH CS
  Oxysterol_BP 282 ygftkfavtlNeieeke.kslaptDsRlRpDqraleegdideAeeeKkrlEekQRerrkereekk.ewkpkwFekekdpdtgeevwky...kgeywe 373
                   yg+tkfa +lNei++ e  +++ tD+RlR Dqra+e+g +deAe+ K+ lEe+QR rrke+ee++ +wkp+wF  ++  ++gee+wk    k++ywe
    KHJ33083.1 882 YGLTKFAASLNEITKIEkGKIPITDCRLRSDQRAVENGSLDEAEKIKETLEENQRIRRKEMEENGgQWKPRWFIPVDGGEEGEEIWKLkmgKEGYWE 978
                   ***************7779******************************************776669**********999******98667889996 PP

>> PH_8  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1      0.86   3.8e+03      22      37 ..     179     194 ..     175     214 .. 0.71
   2 !  118.4   0.1   2.7e-38   1.2e-34       1      88 [.     225     312 ..     225     313 .. 0.98
   3 ?   -1.2   0.1      0.55   2.5e+03      63      76 ..     962     975 ..     956     982 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.86
        PH_8  22 dlksstlsYyrddnss 37 
                 + +s+ +sYy+d+ ++
  KHJ33083.1 179 NNTSTPISYYKDNFQN 194
                 5678899***986433 PP

  == domain 2  score: 118.4 bits;  conditional E-value: 2.7e-38
        PH_8   1 gillkkrrkklqgyakRfFvLdlksstlsYyrddnssalrgkiplslaiisaneekreiiidsGaevWeLkasnekdfqeWvealeka 88 
                 g+l k+rrkk+qgya+RfF+Ld+ ++tlsYy+++nssalrg+iplsla++ a+++k+ei+id+Gae+W+Lk+++ kdf++W++al++a
  KHJ33083.1 225 GVLSKRRRKKGQGYARRFFSLDFATCTLSYYYNRNSSALRGAIPLSLAAVTADRRKKEISIDAGAEIWHLKTDDGKDFEQWTKALQRA 312
                 79***********************************************************************************997 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.55
        PH_8  63 sGaevWeLkasnek 76 
                  G e+W+Lk   e 
  KHJ33083.1 962 EGEEIWKLKMGKEG 975
                 589*****987665 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   5.2e-09   2.3e-05       5     104 ..     225     313 ..     221     314 .. 0.86
   2 ?   -2.6   0.0       1.7   7.7e+03      44      59 ..     898     913 ..     895     930 .. 0.77
   3 ?    3.1   0.1     0.029   1.3e+02      13      26 ..     944     957 ..     928     974 .. 0.77

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 5.2e-09
                 EEEEEETSSSSCSEEEEEEEEE.TTE.EEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHHHH CS
          PH   5 GwLlkkgsgkkkswkkrwfvLk.dse.llyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWikaiq 101
                 G L+k++ +k+ ++ +r+f L+  ++ l+yy n+    ++ ++g i+ls + v+         rk  +++     +  + ++l++++  + ++W ka+q
  KHJ33083.1 225 GVLSKRRRKKGQGYARRFFSLDfATCtLSYYYNR---NSSALRGAIPLSLAAVT------ADRRKKEISIDA---G-AEIWHLKTDDGKDFEQWTKALQ 310
                 889999999999**********77779*******...*****************......455666666622...3.5********************* PP

                 HHH CS
          PH 102 sai 104
                 +a+
  KHJ33083.1 311 RAS 313
                 *97 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.7
                 EEEEEESTTEEEEEEE CS
          PH  44 pkgsislsncevvevv 59 
                  kg+i++++c+ ++++
  KHJ33083.1 898 EKGKIPITDCRLRSDQ 913
                 699*******999765 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.029
                 SSSCSEEEEEEEEE CS
          PH  13 gkkkswkkrwfvLk 26 
                  ++++wk rwf+  
  KHJ33083.1 944 ENGGQWKPRWFIPV 957
                 2333*******976 PP

>> PH_11  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.9    0.0014       6.2      73     105 .]     280     312 ..     223     312 .. 0.83
   2 ?    0.1   0.0      0.23     1e+03       8      19 ..     945     955 ..     937     964 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0014
       PH_11  73 dllleistetkifflkgdsneeteeWvealkea 105
                 ++ ++i  +++i +lk+d+ ++ e+W +al++a
  KHJ33083.1 280 KKEISIDAGAEIWHLKTDDGKDFEQWTKALQRA 312
                 445566677899******************985 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.23
       PH_11   8 kgskaWkrrwfa 19 
                 +g+  Wk rwf+
  KHJ33083.1 945 NGG-QWKPRWFI 955
                 344.5******4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (994 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       728  (0.0406046); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.69u 0.26s 00:00:00.95 Elapsed: 00:00:00.39
# Mc/sec: 7720.82
//
Query:       KHJ33084.1  [L=271]
Description: hypothetical protein EV44_g2290 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-07   30.7   2.2    3.4e-07   30.3   2.2    1.2  1  DUF4588   Domain of unknown function (DUF4588)


Domain annotation for each model (and alignments):
>> DUF4588  Domain of unknown function (DUF4588)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   2.2   1.9e-11   3.4e-07      54     181 ..      20     167 ..      13     230 .. 0.60

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 1.9e-11
     DUF4588  54 klslwteFqnAAkavtsLYkestdaqkrSldlgiqkGyqrrirDll..............aWvkkrrreirredlisflcgkaep.ekserertr...e 134
                   +l   F+ AA +vt+LYk ++ +++  +      Gyq  i++ll               W  +r ++ r   + s  ++ ++  e+ + +r +   +
  KHJ33084.1  20 PEQLLAAFKAAALSVTNLYKSAV-SNQGGSR---LEGYQSAIDELLtfldrenlglsdgeGWMIRRWATERLDGRDSTSHNTESEdEGDKTDRGSspiS 114
                 5677889****************.4443333...47************************899888877665555555555555533444433330014 PP

     DUF4588 135 rasprerevekdksssatelsssveidLqpfreaialnslsgamsk........i 181
                 r+++++r+++++  +s t   s+v  dL+p    +     +++ +         +
  KHJ33084.1 115 RSNSSNRVSQST--QSTTRAVSPVRRDLNPTSTPSLATTDDNTNNLaapvtaftF 167
                 444444444444..37888999999****97765444444433332233333330 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       571  (0.0318478); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2045.21
//
Query:       KHJ33085.1  [L=1113]
Description: putative chromatin remodelling complex atpase chain isw1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-75  253.4   0.0      5e-75  252.4   0.0    1.5  1  SNF2_N           SNF2 family N-terminal domain
    1.5e-43  147.4   2.0    1.5e-43  147.4   2.0    2.4  3  SLIDE            SLIDE
    1.1e-35  122.8   4.4    1.1e-35  122.8   4.4    4.6  6  HAND             HAND
    1.8e-18   66.9   0.0    7.1e-18   65.0   0.0    2.1  1  Helicase_C       Helicase conserved C-terminal domain
    6.4e-10   39.3   2.5    2.7e-09   37.3   0.0    3.2  4  ResIII           Type III restriction enzyme, res subunit
    0.00019   21.5   3.0        4.3    7.6   0.0    4.2  4  Myb_DNA-binding  Myb-like DNA-binding domain
    0.00022   21.0   0.0    0.00087   19.1   0.0    2.1  1  DEAD             DEAD/DEAH box helicase
     0.0013   18.0   0.0     0.0045   16.2   0.0    2.0  1  HDA2-3           Class II histone deacetylase complex subunit
  ------ inclusion threshold ------
      0.074   13.1   0.0        0.3   11.1   0.0    2.1  1  AAA_14           AAA domain
        2.2    9.0  10.1        1.5    9.6   0.2    3.9  3  Ku_C             Ku70/Ku80 C-terminal arm


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  252.4   0.0   2.8e-78     5e-75      49     349 ..     183     454 ..     166     455 .. 0.87

  Alignments for each domain:
  == domain 1  score: 252.4 bits;  conditional E-value: 2.8e-78
                 HHHHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH------------- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  49 aeakqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapkll 147
                 ++++++   GiLaDemGLGKT+q+++++    + + +           gp+L++vP+s+ld+W++e+ +++++ ++ vl + +++    ++  +++ + 
  KHJ33085.1 183 ISLHENGISGILADEMGLGKTLQTISFLG---YLRYILGI-------TGPHLVIVPKSTLDNWKREFGKWTPEVNVLVLQGAKDE---RHQLINDRLVD 268
                 56788999*********************...66666665.......59***********************9977555555544...33344555667 PP

                 ----EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHTH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 148 adydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkllq 246
                 + +dv+it+Y+++ re+      s+lk+  w+++++DE+h++kn++s++a++++ ++++nr+++tGTP+qn+l++l++Ll+f+ +++fg+ + fd++++
  KHJ33085.1 269 ERFDVCITSYEMILREK------SHLKKFAWEYIIIDEAHRIKNEESSLAQVIRMFDSRNRLLITGTPLQNNLHELWALLNFILPDVFGDSEAFDQWFS 361
                 889***********999......9*************************************************************************** PP

                 HHHHHHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH-HHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 247 rpieaqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskskekilelllelrqacn 345
                 + +   ++  +++L+ +l++++lrr+k+dvek+l pk+e  +f+ +s+++ k+Y+++le+ +  +              +++sk+++l+++++lr++cn
  KHJ33085.1 362 KQSG-DQDTVVQQLHRVLRPFLLRRVKSDVEKSLLPKKEINLFIGMSDMQVKWYKKILEKDIDAVNGAGG---------KRESKTRLLNIVMQLRKCCN 450
                 ***9.88999*********************************************444433332222222.........22234779************ PP

                 ---X CS
                 xxxx RF
      SNF2_N 346 hpql 349
                 hp+l
  KHJ33085.1 451 HPYL 454
                 **98 PP

>> SLIDE  SLIDE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       4.9   8.8e+03       3      10 ..     642     649 ..     602     674 .. 0.56
   2 ?   -2.7   0.1       3.3     6e+03      40      72 ..     839     871 ..     823     883 .. 0.48
   3 !  147.4   2.0   8.6e-47   1.5e-43       2     114 .]     905    1020 ..     904    1020 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4.9
       SLIDE   3 iikqIekg 10 
                 +++ I+ g
  KHJ33085.1 642 LLNMIQHG 649
                 23344444 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 3.3
       SLIDE  40 ikyppsnkgkkeyteeeDrfllvllakyGygny 72 
                 +k++ s++g + ++    +  ++  akyG ++y
  KHJ33085.1 839 LKQKLSQQGFSDWNRRDFQQFVNGSAKYGRKDY 871
                 223334444444444444444444455555555 PP

  == domain 3  score: 147.4 bits;  conditional E-value: 8.6e-47
       SLIDE    2 kiikqIekgekkieklkelkellkkkveqyknplqelkikyppsnkgkkeyteeeDrfllvllakyGygn...yekikkeiresplFrfDwflksrt 95  
                  k+i+ Ie+ge+k++k ++++++l+kk+ qy+ plq+lki+y++s+++kk yteeeDrfllvll+kyG+++   ye+i+++ir+splFrfDwf+ srt
  KHJ33085.1  905 KYISMIEAGEEKLRKIDHQRKILRKKMTQYRVPLQQLKINYSVSTTNKKIYTEEEDRFLLVLLDKYGIDSegiYERIRDDIRDSPLFRFDWFFLSRT 1001
                  9************************************************************************************************ PP

       SLIDE   96 pqelqkRcetLlklvekel 114 
                  p+e+++Rc+tLl+++++e+
  KHJ33085.1 1002 PTEISRRCNTLLTTITREF 1020
                  *****************96 PP

>> HAND  HAND
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2         7   1.3e+04      81     100 ..       7      26 ..       3      31 .. 0.81
   2 ?   -5.0   2.4        10   1.8e+04      74      94 ..     120     144 ..     103     151 .. 0.42
   3 ?   -2.8   0.3       5.8     1e+04      64     107 ..     601     642 ..     577     645 .. 0.54
   4 ?   -0.2   0.1      0.96   1.7e+03      74     100 ..     674     708 ..     649     714 .. 0.69
   5 !  122.8   4.4   5.9e-39   1.1e-35       1     111 []     742     847 ..     742     847 .. 0.97
   6 ?    1.4   0.8       0.3   5.3e+02      40      74 ..     915     949 ..     913     963 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 7
                 HHHHHHHHHCT--SSS-CCH CS
        HAND  81 ekrkeeqekidnaepLteee 100
                 ++ ++e   +d  ++Lte+ 
  KHJ33085.1   7 KETNTETMDVDGTPELTEDS 26 
                 6788899999*******986 PP

  == domain 2  score: -5.0 bits;  conditional E-value: 10
                 .....STTCHHHHHHHHHHHCT--S CS
        HAND  74 e....keeereekrkeeqekidnae 94 
                 +    ++  + ++r+ ++e  ++ae
  KHJ33085.1 120 KkgrdRQGGAAAERRRKNEAEEDAE 144
                 1122222233333333333333343 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 5.8
                 CCHTTTS-SS.STTCHHHHHHHHHHHCT--SSS-C.CHHHHHHHH CS
        HAND  64 ddkkeeeeeeekeeereekrkeeqekidnaepLte.eeeeekeel 107
                 +++  ee+     e + +k +++q  i++ ++ t  +  ++k+el
  KHJ33085.1 601 TENAIEEK---VLERAAQKLRLDQLVIQQGRAQTTaKAAANKDEL 642
                 33322222...3467788888888888887665540444566665 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.96
                 .........STTCHHHHHHHHHHHCT--SSS-CCH CS
        HAND  74 e........keeereekrkeeqekidnaepLteee 100
                 +        +++++e + + e+  id+ +++t e 
  KHJ33085.1 674 DideilkhgEQRTAELNARYEKLGIDDLQNFTSES 708
                 122344555666777778889999********986 PP

  == domain 5  score: 122.8 bits;  conditional E-value: 5.9e-39
                 XXXXXXXXXXXX..X----.--S--------GGC--S--CCHHHHHHHHHHHHHHCCT----CCCHTTTS.-SS.STTCHHHHHHHHHHHCT--SSS-C CS
        HAND   1 SvDkYYkdvlktgskkstkkpkapraPKqiniqdfqffpkeLkeLqekEqlaykKkigykvtlddkkeee.eeeekeeereekrkeeqekidnaepLte 98 
                 S+DkYYk++l+tg+++++ kpkapraPKq+n++d+qffp+ Lke+q++E+++++K++gykv+l+++ e++ +      +re++r+ +q+ idnae+Lte
  KHJ33085.1 742 SMDKYYKQALSTGGRTADVKPKAPRAPKQVNVHDYQFFPSALKEIQDRETAYHRKEMGYKVPLPEGPEDKlS------DREAERASDQAYIDNAEALTE 834
                 89***************************************************************9988734......99******************* PP

                 CHHHHHHHHHHHS CS
        HAND  99 eeeeekeellseg 111
                 ee+e+k++l+++g
  KHJ33085.1 835 EEQELKQKLSQQG 847
                 **********997 PP

  == domain 6  score: 1.4 bits;  conditional E-value: 0.3
                 CCHHHHHHHHHHHHHHCCT----CCCHTTTS-SS. CS
        HAND  40 keLkeLqekEqlaykKkigykvtlddkkeeeeeee 74 
                 ++L+++  + ++  kK ++y+v+l++ k +++ ++
  KHJ33085.1 915 EKLRKIDHQRKILRKKMTQYRVPLQQLKINYSVST 949
                 6899999999999**********999888775333 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.0   0.0     4e-21   7.1e-18       2     111 .]     476     589 ..     475     589 .. 0.89

  Alignments for each domain:
  == domain 1  score: 65.0 bits;  conditional E-value: 4e-21
                 HHHHHHHHH.HHTTTTSEEEEEESSHHHHHH.HHHHHHHT.TSTEEEESTTSTHHHHHHHHHHHH...TTSSSEEEESGGGTSSSTSTTESEEEESSSS CS
  Helicase_C   2 kleallell.kleeeggkilifvntidrlek.vklllekk.gikvavlhgelpqnereeileqfn...kgesdvLiatdvaerGidipkvnlVinfdlp 94 
                 k+ +l +ll  l+++g+++lif++  + l+   ++    + g+k+++++g + +++r+++++++n   ++++ +L++t++++ Gi++++++ V+ +d +
  KHJ33085.1 476 KMTMLDRLLvRLKKQGSRVLIFSQMSRLLDIlEDYC--VFrGFKYCRIDGGTAHEDRIAAIDEYNepeSEKFVFLLTTRAGGLGINLTSADIVVLYDSD 572
                 667788887899***************996543444..3369***********************88667777************************** PP

                 SSHHHHHHHHTTSSSTT CS
  Helicase_C  95 rnvtsyiqriGRtgRag 111
                 +n++   q+++R++R+g
  KHJ33085.1 573 WNPQADLQAMDRAHRIG 589
                 ***************97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.0   1.5e-12   2.7e-09       4     169 ..     171     330 ..     169     332 .. 0.83
   2 ?   -3.0   0.0       3.4   6.2e+03     138     154 ..     582     601 ..     573     617 .. 0.65
   3 ?   -2.4   0.4       2.2     4e+03     100     118 ..     886     904 ..     816     969 .. 0.56
   4 ?   -1.0   0.1      0.84   1.5e+03      66     120 ..    1012    1066 ..    1005    1091 .. 0.59

  Alignments for each domain:
  == domain 1  score: 37.3 bits;  conditional E-value: 1.5e-12
                 E-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--..... CS
      ResIII   4 lreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee.kflflvprkslleqtleefkkflseaykeigkkvsgdkkka..... 96 
                 +r+yQ   ++ l+ +l+ ++   g+++ + G GKTl  +++  +l+   ++    l++vp+ +l + +++ef k+++e +     +++g k+++     
  KHJ33085.1 171 MRDYQVAGLNWLI-SLH-ENGISGILADEMGLGKTLQTISFLGYLRYILGITgPHLVIVPKSTL-DNWKREFGKWTPEVN---VLVLQGAKDERhqlin 263
                 6888887776666.666.788899************9999999998888877799999998887.67**********984...4444444444444556 PP

                 .......-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS..TTTHHHHHT---SEEEEEESS- CS
      ResIII  97 kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak.kswreilekfkeavllglTATp 169
                  +  ++  ++++t+++++ +++        +l++ + ++iiiDEaHr++ + +s  +++++f++  +l +T+Tp
  KHJ33085.1 264 DRLVDERFDVCITSYEMILREK-------SHLKKFAWEYIIIDEAHRIKNEeSSLAQVIRMFDSRNRLLITGTP 330
                 67778899************99.......888888999**********99845999*****************9 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.4
                 EETGGGTTS.T...TTHHHH CS
      ResIII 138 iDEaHrlgakk...swreil 154
                 +D aHr+g+kk    +r + 
  KHJ33085.1 582 MDRAHRIGQKKqvvVYRFVT 601
                 79999999965555444443 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 2.2
                 ....-SEEEEEHHHHHHTH CS
      ResIII 100 dstnkkilvttiqsldads 118
                  ++ +k++ + +++++  s
  KHJ33085.1 886 VKEYAKVFWSRYSEINDFS 904
                 3333333333333333333 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 0.84
                  HHHHHHHHGGGGTGG.......GEEEESSS-B--.........-SEEEEEHHHHHHTH.. CS
      ResIII   66 lleqtleefkkflseayke...igkkvsgdkkka..kekdstnkkilvttiqsldadsee 120 
                  ll    +ef++ + +++++   +     g++k++    ++++n++++v   +++++ +++
  KHJ33085.1 1012 LLTTITREFEEATAPKASNivgN-----GKHKREveDDNEDSNIQVMVPAKKRAKNGLKN 1066
                  66666778877777776553331.....22222221334555666666666666655544 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.2       5.7     1e+04       2       7 ..     240     245 ..     240     245 .. 0.91
   2 ?    4.8   0.2     0.018        32       7      24 ..     834     852 ..     833     853 .. 0.93
   3 !    6.5   0.0    0.0051       9.2      10      41 ..     857     889 ..     855     892 .. 0.91
   4 !    7.6   0.0    0.0024       4.3       4      28 ..     955     983 ..     952    1013 .. 0.67

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 5.7
                      SSSBHH CS
  Myb_DNA-binding   2 gkWtee 7  
                      gkWt+e
       KHJ33085.1 240 GKWTPE 245
                      79***8 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.018
                      HHHHHHHHHHHHHT.TCHH CS
  Myb_DNA-binding   7 eEdelLleavkkhG.nrWk 24 
                      eE++ L + + ++G ++W+
       KHJ33085.1 834 EEEQELKQKLSQQGfSDWN 852
                      9*****************8 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0051
                      HHHHHHHHHHT.TCHHHHHHHHTSS-HHHHHHH CS
  Myb_DNA-binding  10 elLleavkkhG.nrWkkIaerlggRtekqcrsr 41 
                      ++++++ +k+G +++++Ia ++ ++ e +++++
       KHJ33085.1 857 QQFVNGSAKYGrKDYASIAIEVDSKNEQEVKEY 889
                      6899999****999***************9987 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.0024
                      SBHHHHHHHHHHHHHHT.TC...HHHHHH CS
  Myb_DNA-binding   4 WteeEdelLleavkkhG.nr...WkkIae 28 
                      +teeEd  Ll ++ k+G ++   +++I +
       KHJ33085.1 955 YTEEEDRFLLVLLDKYGiDSegiYERIRD 983
                      6****************877777777755 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   4.9e-07   0.00087      18     149 ..     193     318 ..     173     338 .. 0.64

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 4.9e-07
                 EEEESTTSSHHHH..HHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHH...HTTCSEEEEEHHHHHHH CS
                 xxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxx RF
        DEAD  18 lvaaeTGsGKTla..flipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskl...dngvdivvgtpgrlddl 111
                 ++a e G GKTl    ++  l+ +    g tg   l+++P   L  +  +++ k++ +  ++vl++ g +++r+ql +    d++ d+ ++  +++++ 
  KHJ33085.1 193 ILADEMGLGKTLQtiSFLGYLRYI---LGITG-PHLVIVPKSTLD-NWKREFGKWTPE--VNVLVLQGAKDERHQLINDrlvDERFDVCITSYEMILR- 283
                 566778888887622223333333...24555.557777876653.344444444443..6677777777777776443334688***********99. PP

                 HHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 112 lstgklnlsqvrflVlDEadrlldqgfsdfinrilnql 149
                  ++ +l+    +++++DEa+r+ ++  +  + ++++ +
  KHJ33085.1 284 -EKSHLKKFAWEYIIIDEAHRIKNE--ESSLAQVIRMF 318
                 .66676677779***********99..55555555555 PP

>> HDA2-3  Class II histone deacetylase complex subunits 2 and 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   2.5e-06    0.0045      11     255 ..     405     621 ..     397     631 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 2.5e-06
                 ---HHHHHHHHHHHHHTHHHHHHHHHSTTT--HHHH.HHHHHHHH.HHHHHHH-GGGT--TT--S-S-STTHHHHHHHT-HHHHHHHHHHHHHTTSS.. CS
      HDA2-3  11 pltelqkelteqivslhyedllkyvetsdsqeklslsikslticlenlslvanHPsLLvdHympkklllkelpeklaetSgKFkvlndlvnliierkrk 109
                 +++++q+  +++i++     +       +s+      + +l+i++ +l+   nHP+L  +   p    +  + e+l+ + gK+ +l +l+  + ++   
  KHJ33085.1 405 GMSDMQVKWYKKILEKDIDAVNGAGGKRESK------TRLLNIVM-QLRKCCNHPYLF-EGAEPGPPYT--TDEHLIFNAGKMTMLDRLLVRLKKQG-- 491
                 5666666666666554433333222222222......34456666.777777888874.6666665554..4589*************999998888.. PP

                 ..EEEEEEE-STHHHHHHHHHHTTSSSEEEESSS--S--S---S-..................-SEEEEEEESS---TTTS--TT-S-EEEEEE-SST- CS
      HDA2-3 110 sslnvlvvakskkeldLiEalllGkklkikrysgeklydekkkkskdtkknsrktkeklkkkihsltihllsttrqltkdksllenikfdliiafDssv 208
                     vl+ ++  + ld++E + + +++k+ r +g +  ++      d++++             s ++ +l ttr         + + +d+++  Ds+ 
  KHJ33085.1 492 --SRVLIFSQMSRLLDILEDYCVFRGFKYCRIDGGTAHEDRIAAI-DEYNE-----------PESEKFVFLLTTRAGGLG---INLTSADIVVLYDSDW 573
                 ..9*********************************999999888.44444...........455778888888877444...566778********** PP

                 -TTSHHHHHHH---.-------EEEEEETTSHHHHHHHHTS-TT-HHH CS
      HDA2-3 209 dtsspsveslrtqn.rkknklpiirlvpinSieHvkLcfkkdedepey 255
                 +++ +   + r ++  +k++++++r v+ n ie   L++ +++ + ++
  KHJ33085.1 574 NPQADLQAMDRAHRiGQKKQVVVYRFVTENAIEEKVLERAAQKLRLDQ 621
                 **999888888776234556*************999999855555444 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00017       0.3      55     104 ..     280     333 ..     243     342 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00017
      AAA_14  55 lilek...lkeekktylflDEiqevpewekalkslvdeg.knldvivtGSnskl 104
                 +il++   lk+   +y+++DE++++++ e+ l ++++   ++ ++++tG  +++
  KHJ33085.1 280 MILREkshLKKFAWEYIIIDEAHRIKNEESSLAQVIRMFdSRNRLLITGTPLQN 333
                 3333313333345679******************99955545599999986665 PP

>> Ku_C  Ku70/Ku80 C-terminal arm
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.9      0.18   3.2e+02      46      87 ..      97     136 ..      92     142 .. 0.73
   2 ?    0.5   0.2      0.58     1e+03      29      67 ..     805     842 ..     801     865 .. 0.76
   3 ?    9.6   0.2   0.00083       1.5      40      87 ..    1002    1061 ..     998    1062 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.18
                 H-....HHHHHHHHHHHHH..HHHHH......---THHHHHH CS
        Ku_C  46 ragslleewkelfeleeedkekkkekrkaededeepaakkak 87 
                 +  + ++e+ ++++ +++d  k k+k+ +++++++ a+++ k
  KHJ33085.1  97 NSNPRVQEILHEIDRQNAD--KDKAKKGRDRQGGAAAERRRK 136
                 5567789999999999999..777777777755555555544 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.58
                 ..---SS--HHHHHHHHH-....HHHHHHHHHHHHH..H CS
        Ku_C  29 peeledktlpkyeaidkragslleewkelfeleeedkek 67 
                 pe +edk+  + ea  +  ++++++ + l e+e+e k+k
  KHJ33085.1 805 PEGPEDKLSDR-EAERASDQAYIDNAEALTEEEQELKQK 842
                 77889999999.666667779999999999999887532 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.00083
                  HHHHHHH-....HHHHHHHHHHHHH.......HHHHH......---T.......HHHHHH CS
        Ku_C   40 yeaidkragslleewkelfeleeedke.....kkkekrkaededeep.......aakkak 87  
                  +++i++r+  ll ++ ++fe+  + k      + k kr+ ed++e++       a+k+ak
  KHJ33085.1 1002 PTEISRRCNTLLTTITREFEEATAPKAsnivgNGKHKREVEDDNEDSniqvmvpAKKRAK 1061
                  579******************99988579***9999999998777777788888999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1124  (0.0626917); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.78u 0.26s 00:00:01.04 Elapsed: 00:00:00.43
# Mc/sec: 7818.83
//
Query:       KHJ33086.1  [L=329]
Description: putative dienelactone hydrolase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-19   69.4   0.0      5e-17   62.2   0.0    2.1  1  DLH            Dienelactone hydrolase family
    4.1e-05   23.4   0.0     0.0036   17.0   0.0    2.9  2  Abhydrolase_1  alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> DLH  Dienelactone hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.2   0.0   5.6e-21     5e-17      12     215 ..      78     328 ..      64     329 .] 0.79

  Alignments for each domain:
  == domain 1  score: 62.2 bits;  conditional E-value: 5.6e-21
         DLH  12 kkpvvvviqeifGvn.dnikdi.serlaeeGYvalaPdlYarqa....................ldpndeaeaaraldelvskvaeekvlddlkaavay 88 
                 + +  + ++ + G++    ++i ++ +a++G+++++Pd++a +                     l+  ++a +  ++d+  + ++ +kv  +l   +++
  KHJ33086.1  78 PLKFLLFLTGATGLHsV-NNQIqADNFAKQGFLVVLPDMFADDPlpgsatyeeakdpsvidaikLRLAETA-KSFLVDMWLARQTPQKVIPILMKVIEA 174
                 66777788888999952.33442799*****************9*******99999999998653233333.333444555555588888888666666 PP

         DLH  89 lks...vpevstkkvgvvGfCmGGalalllaaevpevdaavafYG......................lspekeleeaakikapilalfgeeDefipade 162
                 +k    ++ ++ + + +vG+C+GG+++llla e+p    ++++                             + e+ + ik p+ ++  e+D+ +p d 
  KHJ33086.1 175 AKDefaNEIANGDGIYSVGYCFGGRITLLLAGEKPDRFPTIPWIQqvqdeesspvntgpyikagaifHATLVTKEDFRSIKSPLCFICVENDQLFPEDI 273
                 65411122356789********************99999*****9******************9987666667788999*******************9 PP

         DLH 163 vekleealkaanvdlelkvYpgagHaFandsre..syneeaaedawervlelfkq 215
                  +  e+ lk   +d+e+k Y ++ H+F    +      ++a++da+ ++l+++++
  KHJ33086.1 274 KQYGEQSLKYDRIDCEFKTYTDVPHGFGVVGEYenARIKAAQADAFDHALSWLQR 328
                 9999999*99*****************765444337889999***********98 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   4.1e-07    0.0036       3      98 ..      82     212 ..      80     216 .. 0.65
   2 ?    2.2   0.0     0.013   1.2e+02     206     232 ..     235     276 ..     212     293 .. 0.70

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 4.1e-07
                    EEEE-STTT..CGGGGTTGHHHHHHHHTTSEEEEEEETTSTTSSSTTTGB.CHH.......................................SHH CS
  Abhydrolase_1   3 lvilhGlpg..ssdvwaerglapaLakdgfdvillDlrGvgySspapacinddy.......................................gta 57 
                    l++l G +g  s +++++   a+++ak+gf v+l+D+      +p p +   +y                                        ++
     KHJ33086.1  82 LLFLTGATGlhSVNNQIQ---ADNFAKQGFLVVLPDMFA---DDPLPGS--ATYeeakdpsvidaiklrlaetaksflvdmwlarqtpqkvipILM 169
                    677777777655555555...777777777777777643...2222222..223333444444445555555555556666777777777776555 PP

                    HHHHHHH..HHHHHCTTSSEEEEEETHHHHHHHHHHHHHGGGE CS
  Abhydrolase_1  58 svaddld..rildalgddkltlvGhSmGGmialayaaeyperV 98 
                     v +  +  ++ +  + d ++ vG+++GG+i l +a e p+r 
     KHJ33086.1 170 KVIEAAKdeFANEIANGDGIYSVGYCFGGRITLLLAGEKPDRF 212
                    5666666655588899999**********************97 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.013
                    C...............THHHHSEEEEEEETTCSSSCHHHHHH CS
  Abhydrolase_1 206 e...............lknvlaptlvisgtsDplvppkaled 232
                    +               ++ +++p  +i+ ++D+l+p++ + +
     KHJ33086.1 235 IkagaifhatlvtkedFRSIKSPLCFICVENDQLFPEDIKQY 276
                    2555556666666666778999**************866554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2323.27
//
Query:       KHJ33087.1  [L=663]
Description: putative spry domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-32  112.0   0.2    3.6e-32  111.3   0.2    1.4  1  CLTH      CTLH/CRA C-terminal to LisH motif domain
    1.3e-25   89.9   0.1    3.5e-25   88.4   0.2    1.7  2  SPRY      SPRY domain
     0.0002   21.2   0.4    0.00072   19.4   0.1    2.2  2  LisH      LisH
  ------ inclusion threshold ------
       0.13   12.2   0.1       0.27   11.1   0.1    1.4  1  DUF5323   Family of unknown function (DUF5323)


Domain annotation for each model (and alignments):
>> CLTH  CTLH/CRA C-terminal to LisH motif domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.3   0.2     8e-36   3.6e-32       4     145 ..     434     634 ..     431     637 .. 0.85

  Alignments for each domain:
  == domain 1  score: 111.3 bits;  conditional E-value: 8e-36
        CLTH   4 erqkIiklilegdlseaiewinenkpellesnsnLeFkLkllqfielirg........kt....................................... 55 
                  rq+I+++il+gd++ a++++n ++p++l+ n++++F L++++f+e+ir+        ++                                       
  KHJ33087.1 434 HRQRIRSAILDGDIDAALRYTNLYFPQILKDNEKVYFRLRCRKFVEMIRKaaelqnsnQEngtkkchkydtdwyddiinhqmeidgndplsqtygller 532
                 79***********************************************77776665511666677777777788888888888888888888888888 PP

        CLTH  56 ........kd...ieealeyarenl.efend...ehlkelekamsLLafsdpeskelssplknlldpsrrekvakefnsailkllglskespLeillsa 139
                         ++   ++e ++y++e   ef+ d   e  + le+a++L+a+++p +      ++ lldps r+ va+e+nsail++lg+s++s Le+++++
  KHJ33087.1 533 ddtskdlsEHehlLNETIKYGTELSaEFRDDprkEVRQALEDAFALMAYQEPLN---ATGVAYLLDPSGRVAVAEELNSAILQSLGKSSSSFLELIYQQ 628
                 7777555511566**********443555557778****************999...88**************************************** PP

        CLTH 140 glsalk 145
                 ++++l+
  KHJ33087.1 629 TTVLLE 634
                 **9986 PP

>> SPRY  SPRY domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.5   6.9e+03      61      80 ..       3      22 ..       2      23 .. 0.83
   2 !   88.4   0.2   7.8e-29   3.5e-25       2     119 ..     225     342 ..     224     343 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.5
                SSSSTTSEEEEEEETTTTEE CS
        SPRY 61 qparegdviGvalDleegel 80
                q+++ +++ Gv+lD+ ++++
  KHJ33087.1  3 QSYGNPTRTGVYLDFLNQSI 22
                467888999******98887 PP

  == domain 2  score: 88.4 bits;  conditional E-value: 7.8e-29
                 EEEEEEET..CCTSSEEEEEEEETTSSSSSTSSSTSSTTEEEEETETTEEE.EETESCEEEESSSSTTSEEEEEEETTTTEEEEEETTEEEEEEEESTT CS
        SPRY   2 hyfevkiq..saeggsisvGlateqtdlsdksgegddrgswglcgdngtrt.saeqskaygkqparegdviGvalDleegelsFtkngknlgvaFrnvr 97 
                 +yfev i+  ++e++ i +G++ ++++l +    g++++sw+++gd+g+ + s+ ++k yg+ ++  +dviG+++++++++ +Ftkng++lg+aF++++
  KHJ33087.1 225 YYFEVSILarKREESTIGIGFSSKKVPLTR--PPGWEPESWAYHGDDGDSFcSQTSGKGYGP-SYCANDVIGCGVNFKTKSAFFTKNGIHLGTAFKDLK 320
                 8********99****************555..569**************99999999*****.************************************ PP

                 TSSEEEEEEE..STCEEEEESSE CS
        SPRY  98 gaelfPvvslg.ngaslkinlgl 119
                 g e++P v ++ +g+ +++n+g+
  KHJ33087.1 321 G-EFYPSVGMKkSGEHIRVNFGQ 342
                 *.*********9*********97 PP

>> LisH  LisH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.1   1.6e-07   0.00072       4      26 ..     383     405 ..     380     406 .. 0.92
   2 ?   -1.9   0.0      0.86   3.9e+03       1       8 [.     604     611 ..     604     612 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.6e-07
                 HHHHHHHHHHCT-HHHHHHHHHH CS
        LisH   4 NrLIydYLvkeGyeetAeaFekE 26 
                  +L++ +L + Gy+e+A++F+kE
  KHJ33087.1 383 QALVLQFLKHDGYVESAREFAKE 405
                 68********************9 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.86
                 HHHHHHHH CS
        LisH   1 eeLNrLIy 8  
                 eeLN+ I+
  KHJ33087.1 604 EELNSAIL 611
                 79****97 PP

>> DUF5323  Family of unknown function (DUF5323)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1     6e-05      0.27      40      53 ..     164     177 ..     150     184 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6e-05
     DUF5323  40 tvYapLPpLPpdwt 53 
                  +Y+pLPpLP+ w 
  KHJ33087.1 164 YEYEPLPPLPSKWN 177
                 47***********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (663 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       745  (0.0415528); expected 358.6 (0.02)
Passed bias filter:                      597  (0.033298); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.41
# Mc/sec: 4805.47
//
Query:       KHJ33088.1  [L=304]
Description: hypothetical protein EV44_g3132 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-39  135.7   0.0    2.1e-39  135.3   0.0    1.1  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
      0.046   13.3   0.0      0.076   12.6   0.0    1.3  1  MHC_I     Class I Histocompatibility antigen, domains alpha 1


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.3   0.0   2.4e-43   2.1e-39      19     221 ..       2     234 ..       1     235 [. 0.92

  Alignments for each domain:
  == domain 1  score: 135.3 bits;  conditional E-value: 2.4e-43
                 THHHHCTB--...........-------HHHH.................HCCHTS-.-EEEEEEBCCGCCCSBB-GGGGGGG-EEET............ CS
       RVT_1  19 ykalnkliakrLkdvl..ekllsenqpgfrpgrstldav....edllkalkkkkka.klllklDlkkaFdsvpleellrkltafkvptklinliksfls 110
                 +k+l+kl+a+r+++++   +ll+e+q+g rp+r t+ av    e+++ +  k kk+   ll+lD+++aFd+v++++l++ l + ++p+++ + ++sfl+
  KHJ33088.1   2 GKLLEKLVANRISKAAedFNLLPEEQMGARPKRCTISAVelltEQIHTIWGKDKKKvASLLSLDISGAFDNVSHKRLIHNLREKGIPRWICKFVESFLE 100
                 699*************999***********************87777776666666699**************************************** PP

                 ..............TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHH......HHHHHHHHHHHHHHTT--BEGGG CS
       RVT_1 111 trsfsvrv.ngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskee......lqelleaveewlkesglkinpeK 202
                 +r++s+ + + +  k++++++g+pqGs lSP+lf +f++ ll  l++  ++   + ++DD+ il+ s +       l+e   ++eew++++g++++peK
  KHJ33088.1 101 ERTTSIVLgSFKG-KQIPTSTGIPQGSSLSPILFLFFVSTLLPLLQT--PSTAAVGFVDDTNILTWSSSTeencrkLEEKHGVCEEWARKHGVRFAPEK 196
                 *******955555.********************************9..8*************9988555589************************** PP

                 -EEE........................ESSEEETTEE CS
       RVT_1 203 tklvlft..................v.kseevkyLGvt 221
                  +l++ft                     + ++++LGv 
  KHJ33088.1 197 YQLMHFTrarkrhnleakvsiqghlTsPQPSLRVLGVY 234
                 ********999999999999988753799999999986 PP

>> MHC_I  Class I Histocompatibility antigen, domains alpha 1 and 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   8.5e-06     0.076      16      87 ..     143     211 ..     132     221 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 8.5e-06
                 TTSSEEEEEEEEETTEEEEEEETTSSS.SEEESSGGGGTSC.HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT CS
       MHC_I  16 glgePrfiavgyvddtqfvrfdsdaespraepraeWieqeg.peyWeretqkakakeqlfrenlrtlleyyNq 87 
                  l++P+  avg+vddt+ +++ s++e    e + +  e++g  e W r+     a e+ + +++  ++++ N 
  KHJ33088.1 143 LLQTPSTAAVGFVDDTNILTWSSSTE----ENCRKLEEKHGvCEEWARKHGVRFAPEKYQLMHFTRARKRHNL 211
                 5678999***************9998....7777777888878999999888888888888888888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       469  (0.0261587); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.50
# Mc/sec: 1846.40
//
Query:       KHJ33089.1  [L=125]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
        0.1   11.9   0.1       0.18   11.1   0.1    1.3  1  ADPrib_exo_Tox  ADP-ribosyltransferase exoenzyme


Domain annotation for each model (and alignments):
>> ADPrib_exo_Tox  ADP-ribosyltransferase exoenzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1     1e-05      0.18      69     106 ..      37      75 ..      27      80 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 1e-05
                     B-SS-EEEEEEE-GGGG-HHHHTT.-HHHHHHHHHHHTT CS
  ADPrib_exo_Tox  69 ripeniivYRrvdeaelgleldsk.neekvsefeakvkg 106
                     +++e+++vYR+ d+ e+++ + +   eek+se+ea + +
      KHJ33089.1  37 PTKEQLKVYRQADNREFQPAVRVRaTEEKASEMEALIGN 75 
                     899****************99998779999999987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 990.81
//
Query:       KHJ33090.1  [L=179]
Description: hypothetical protein EV44_g4193 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.075   13.1   0.3        4.2    7.4   0.1    2.1  2  DUF1451   Zinc-ribbon containing domain


Domain annotation for each model (and alignments):
>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0    0.0026        47      22      73 ..      63     114 ..      44     122 .. 0.86
   2 ?    7.4   0.1   0.00023       4.2      26      56 ..     122     152 ..     116     161 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0026
     DUF1451  22 keklseaeeltkeelelvaeylkrDleeaarsleeskeeleewlsldlelie 73 
                 k+ +++a++l ++   ++ +yl +D++++ ++ + +++ +++ ls+ +++i 
  KHJ33090.1  63 KTATNQASQLLDDGSGQMYSYLPKDIRKVIEKRRLRERAWRARLSIYTSVIC 114
                 55677889999999999**************999999999999999988875 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.00023
     DUF1451  26 seaeeltkeelelvaeylkrDleeaarslee 56 
                 + +++++kee++lv++yl++ ++ +a+s ++
  KHJ33090.1 122 VYKNDIEKEEADLVRNYLQQAIALLAASDNA 152
                 66899***************99888877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1462.07
//
Query:       KHJ33091.1  [L=417]
Description: putative phosphoglycerate kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   4.2e-149  496.6   3.1   4.7e-149  496.4   3.1    1.0  1  PGK       Phosphoglycerate kinase
  ------ inclusion threshold ------
      0.044   13.2   0.0      0.068   12.6   0.0    1.3  1  DUF3530   Protein of unknown function (DUF3530)


Domain annotation for each model (and alignments):
>> PGK  Phosphoglycerate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  496.4   3.1  5.2e-153  4.7e-149       1     378 []       9     406 ..       9     406 .. 0.94

  Alignments for each domain:
  == domain 1  score: 496.4 bits;  conditional E-value: 5.2e-153
                 GGGS--TT-EEEEEE-----EECTTEES--HHHHHHHHHHHHHHHTT-E.EEEEE--S--TT.S-GGG-SHHHHHHHHHHHTT-EEEESSTTSHHHHHH CS
         PGK   1 vkdldlkgkrvlvRvDfNvplkkegkitddtriraalpTikyllekgak.vvllsHlgrpkg.ekeklslkpvaerLsellgkeVkfvedvvgeeveea 97 
                 ++d++lk+krvl+RvDfNvpl+ e+k+t+++ri  a+pTiky++e+gak vvl+sHlgrp+g  +ek+sl+pv+ +L++ll+k+Vkf++d+vg+eve+ 
  KHJ33091.1   9 ITDVELKDKRVLIRVDFNVPLDAEKKVTNTQRIAGAIPTIKYAIEHGAKvVVLMSHLGRPDGrVQEKYSLQPVVPELEKLLEKKVKFAQDCVGSEVEAI 107
                 689**********************************************8899********95569********************************* PP

                 HHT-TTT-EEEES-GGGSTTTT....TT-H.............HHHHHHHHT-SEEEE--GGGTTS--TTTTHHHHCSEEEE-HHHHHHHHHHHHHHHS CS
         PGK  98 iaelkegevllLeNvrfykeEe....knde.............elakklasladvyVnDAFgtahrahaStvgiakvlsaaaGllmekElealskvlen 179
                 ++  + g+v+lLeN+rf++eEe    +  +             e++k l++l+d+++nDAFgtahrah+S+vg++  ++ a G+lm+kEle+++k+le+
  KHJ33091.1 108 VNGSTGGQVVLLENLRFHAEEEgsskD--AegtkikasasaieEFRKGLTALGDIFINDAFGTAHRAHSSMVGVKLPIK-ASGFLMKKELEYFAKALES 203
                 *********************844440..144444444455557*******************************8887.******************* PP

                 --SSEEEEEEES-HHHCHHHHHHHTTT-SEEEEETCHHHHHHHH.TT-B-TTSS--GGGHHHHHHHHHHHHHHT-EEE--SEEEEESS.S.STTS.EEE CS
         PGK 180 perplvailGGakvsdkikvienLlekvdkliigGgmantFlka.qgleigkslveedklelakellekakkkgvkillpvDvvvake.e.aekeakvv 275
                 p+rp++ailGGakvsdki++i+nLl kv++l+i+Ggma+tF k+ ++++ig+sl++e   +++ +l+ekakk++v+i+lpvD+++a++ +  +k+++++
  KHJ33091.1 204 PKRPFLAILGGAKVSDKIQLIDNLLGKVNSLVICGGMAFTFKKTlENVKIGDSLFDEAGSKTVGDLVEKAKKNNVEIVLPVDYITADKfAkDAKTGTAT 302
                 ********************************************9******************************************953333448889 PP

                 ECCG--TT-EEEEE-HHHHHHHHHHHCC-SEEEEES-SS-TTSGCCCHHHHHHHHHHHHHCH.TSEEEEESHHHHHHHHHTT-GGGSSEEESSSHHHHH CS
         PGK 276 eveaipedemalDigpktielfaeaikeaktvvwnGpmGvfeiekfakGTkaiakalaeatk.galsivGGgdsaaaveklgladkvshvStGGgAsLe 373
                 ++e ip+++m+lD+g+k+iel+++ai++a+t++wnGp Gvfe+++f++GTk+ ++a+ ea + g ++i+GGgd+a++++k++++dk+shvStGGgAsLe
  KHJ33091.1 303 DKEGIPDGWMGLDCGAKSIELYKSAISKASTILWNGPPGVFEFDAFSNGTKQTLDAAVEAAQnGKIVIIGGGDTATVAAKYKVEDKLSHVSTGGGASLE 401
                 99*******************************************************99988899********************************** PP

                 HHCTS CS
         PGK 374 lLegk 378
                 lLegk
  KHJ33091.1 402 LLEGK 406
                 ****8 PP

>> DUF3530  Protein of unknown function (DUF3530)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   7.6e-06     0.068     171     220 ..     343     389 ..     272     394 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 7.6e-06
     DUF3530 171 earkahrervrarlqaaiaflnqrgaenivllghgtgAywaarylaekks 220
                  +++a+ +   + l+aa++ +++    +iv++g g++A  aa+y  e+k 
  KHJ33091.1 343 FEFDAFSNGTKQTLDAAVEAAQN---GKIVIIGGGDTATVAAKYKVEDKL 389
                 4667788888999*********9...9*****************877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       642  (0.0358079); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.37
# Mc/sec: 3338.69
//
Query:       KHJ33092.1  [L=94]
Description: putative 26 proteasome complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.8e-23   81.3  13.6    5.4e-23   80.8  13.6    1.2  1  DSS1_SEM1  DSS1/SEM1 family


Domain annotation for each model (and alignments):
>> DSS1_SEM1  DSS1/SEM1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.8  13.6     3e-27   5.4e-23       2      60 .]      28      87 ..      27      87 .. 0.91

  Alignments for each domain:
  == domain 1  score: 80.8 bits;  conditional E-value: 3e-27
                HHHHHHHHHHTTSTTHHHHH----------...---BESSTTTSCGGCHHHHHHHHHHHH CS
   DSS1_SEM1  2 ekkklklLeeDDEFEeFpvedwdeeeeeake.ekklWednWDDddveddFskqLreELek 60
                +++ +++LeeDDEFE+Fpve+w  ee+e ++ + +lWe++WDDdd ++dFs+qL+eEL+k
  KHJ33092.1 28 KQVGATTLEEDDEFEDFPVENWGPEETEGANnNLNLWEESWDDDDASEDFSTQLKEELKK 87
                567789****************888888776589************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       765  (0.0426683); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.22s 00:00:00.56 Elapsed: 00:00:00.36
# Mc/sec: 778.86
//
Query:       KHJ33093.1  [L=616]
Description: hypothetical protein EV44_g0984 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (616 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4782.40
//
Query:       KHJ33094.1  [L=938]
Description: putative glycoside hydrolase family 3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-67  228.0   0.0    2.3e-67  227.6   0.0    1.1  1  Glyco_hydro_3    Glycosyl hydrolase family 3 N terminal domai
     0.0061   16.8   0.0      0.019   15.2   0.0    1.8  1  Acetyltransf_1   Acetyltransferase (GNAT) family
  ------ inclusion threshold ------
      0.023   14.6   0.0      0.066   13.1   0.0    1.7  2  Glyco_hydro_3_C  Glycosyl hydrolase family 3 C-terminal domai


Domain annotation for each model (and alignments):
>> Glyco_hydro_3  Glycosyl hydrolase family 3 N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.6   0.0   3.9e-71   2.3e-67       2     319 .]      15     342 ..      14     342 .. 0.95

  Alignments for each domain:
  == domain 1  score: 227.6 bits;  conditional E-value: 3.9e-71
                    HHHHHHHTEE-B-SE-S--HHHHHHHHHH--SEEE--GGGTSSHHHHHHHHHHHHHH-SS....S--EEEE---BTTB---SSS...---S-HHHH CS
  Glyco_hydro_3   2 ldekigqLlvvevseekkseeaaellkkyqvGgiilfaenledtkqleelieaarqaseksrlgiPlllavDqegGlvqrlgeg...tlfPsalal 94 
                    ld  igqL  +  ++++  ++++ l+++y++G+i+l a+nl++ +++ +l++ ++   ++   ++Pll+a Dqe+G v+ l ++     fPsa++ 
     KHJ33094.1  15 LDWAIGQLFFMGWEGTEVTHQIKTLIEDYHLGAILLTAKNLKNAQETTKLVQELQSIARNAGHPVPLLIALDQENGGVNSLFDEnfvCQFPSAMGV 110
                    6778**********************************************************************987776544435668******* PP

                    HHHT-HHHHHHHHHHHHHHHHHHT--EE---B-----STTSS.SGGGSS-SSHHHHHHHHHHHHHHHHHTT-EEEEEEETTGTT-SSE.TTTSEEB CS
  Glyco_hydro_3  95 aatssldlikelgriiakelralgididfaPvvdvnrdprng.igvrsFsedpelvaalaaamvkGlqgagvaatvKHFpghGdgavd.shkelpt 188
                    aat+sl+l++++++++a+e++a+g+++  +Pv+dv  + r    gvr+ ++dp+ v++++ ++++G+++agva+++KHFp +G+ +   s +e+p 
     KHJ33094.1 111 AATNSLNLAYDVAKATAEEISAVGVNMIMGPVLDVLTNARHQpLGVRATGDDPQEVSRYGISTINGYKDAGVATCGKHFPSYGNLEFLgSSVEMPF 206
                    ***********************************99998877****************************************988653889**** PP

                    ----HHHHHHTTHHHHHHHHHTT-SEEEE---B-TTT---....BGGG-HHHHIIIIIIIS---SEEEES-TTSHHHHCCS-HHHHHHHHHHHT-S CS
  Glyco_hydro_3 189 vdhseeelrevdlvpfqaaieagvdsVMtaHvqfpaldgt....patgskklltdvLRkelGFdGvvvsDalamkeiadrggkeeavvlaLkAGvD 280
                    ++ + e+l    lvpf++ai++g+ds+M++      +++t     a +s +++ d+LR +lGF+Gv++s  l m  ++   g +   v+a++AG+D
     KHJ33094.1 207 ITETIEQLTLSALVPFRNAIREGLDSIMVG--GCAMVNDTmnvmHACLSDQVVEDLLRLDLGFNGVTISECLEMDSLSHDIGVRGGTVMAVEAGCD 300
                    ******************************..8888999999999*************************************************** PP

                    BEES-S---SG...HHHHHHHHHTTSS-HHHHHHHHHHHHHH CS
  Glyco_hydro_3 281 ilLvpeertse...ikalkkavkeGeltearidesvrrvlrl 319
                    + L + + ts+   i +lk  +++G ++++ri  s+rr+l+l
     KHJ33094.1 301 LVLFCRSFTSQkeaISGLKLGIENGMISRERIIISLRRILNL 342
                    ********99989999***********************986 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   3.1e-06     0.019      18     101 ..     631     712 ..     617     718 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 3.1e-06
                     HHHHHHHHHHHHSTTCEEEEEEET..TEEEEEEEEEEEETTSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHT.TESEEEEEE CS
  Acetyltransf_1  18 daseeefeesfsleaegllvaeed..geliGfisllkipdekggvayieslaVspeyrgkGlGsaLlealeeraree.gikkivlav 101
                      +s+ +  es   ++e+++v++    + l Gf+s + +p+   + + i  l V+p+ r+  +G  L + +++ ++++ gik + l  
      KHJ33094.1 631 IPSVPIISES---IEEFHYVVRNSstQALFGFCSTYYYPE--AKLGSISTLLVDPAKRNLSVGYSLHQRALRGLLSKeGIKILQLGS 712
                     5555565566...777555544442266*****9999999..9*****************************999996777667755 PP

>> Glyco_hydro_3_C  Glycosyl hydrolase family 3 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.1e-05     0.066     113     175 ..     521     580 ..     499     601 .. 0.82
   2 ?   -3.0   0.0      0.97   5.8e+03     154     171 ..     778     795 ..     776     801 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.1e-05
                      SSEEEEEEESSGG--TTTGTTTEEEEEE-S--GCCHHHHHHHHHTTSS---B--SS-EESSSG CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_3_C 113 knvvvvlqsggpvavepwkeenvkAilaawlpGqegGtaiadvLfGdvnPsGkLpvtfpksle 175
                      k+  +v+  ++p++   + + ++   + ++   + +  a+++ L+G+++P G Lp tf ks +
       KHJ33094.1 521 KP-LIVVAVSSPYDF-AF-DSSIGTYVCTFDFTETALSALVRALLGAFKPLGTLPGTFRKSRK 580
                      44.556677789999.56.679********99****************************977 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.97
                      HHHTTSS---B--SS-EE CS
                      xxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_3_C 154 dvLfGdvnPsGkLpvtfp 171
                      d+++G+ n sG L + f+
       KHJ33094.1 778 DLIYGHENASGALEYIFK 795
                      89*********9988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (938 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 6495.07
//
Query:       KHJ33095.1  [L=160]
Description: putative prefoldin subunit domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.8e-21   75.7   0.0    4.7e-21   74.9   0.0    1.3  1  Prefoldin      Prefoldin subunit
  ------ inclusion threshold ------
      0.016   15.2   3.0       0.66   10.0   0.0    2.2  2  Prefoldin_2    Prefoldin subunit
      0.069   12.4   2.0      0.085   12.1   0.5    1.7  2  MIS13          Mis12-Mtw1 protein family
      0.072   13.4   1.1        4.2    7.7   0.2    2.2  2  DUF4164        Domain of unknown function (DUF4164)
       0.11   12.7   3.1       0.32   11.2   0.7    2.1  2  Cortex-I_coil  Cortexillin I, coiled coil
       0.11   13.1   0.2        1.9    9.1   0.0    2.1  2  DUF883         Bacterial protein of unknown function (DUF883)
       0.17   11.9   1.8       0.62   10.1   0.3    2.0  2  DUF1664        Protein of unknown function (DUF1664)


Domain annotation for each model (and alignments):
>> Prefoldin  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.9   0.0   1.8e-24   4.7e-21       2     117 ..      29     145 ..      28     147 .. 0.96

  Alignments for each domain:
  == domain 1  score: 74.9 bits;  conditional E-value: 1.8e-24
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT..-TT-EEEEEEETTEEEEEE--STTEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin   2 keeleslqaelaqlkeaieelektletlktlkk.edegkevlvplgaglyvkaevkdtdkvlvdlGagyyveksleeAiellkkkleelekqlekleee 99 
                 + el++l+ +++ql+ a+++++++   +++    +  +k +lv l+++lyv++ + d+++v+vd+G+g+yvek+ ++A+++++ ++++l ++l++le  
  KHJ33095.1  29 DDELDHLTNSFSQLRGAQTKFQECARSIENGVSpAIMEKPILVALTSSLYVPGVLADPSHVIVDIGTGFYVEKTTDDAKKFYEARVKDLGSNLKTLESI 127
                 6799**************************999999*************************************************************** PP

                 HHHHHHHHHHHHHHHHHH CS
   Prefoldin 100 leklkdqittleanlaql 117
                 l+ + ++   +e+ l+q+
  KHJ33095.1 128 LQGKVNNSRVVEEVLRQK 145
                 **9999999888888775 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.9     0.007        18      64      97 ..      18      51 ..       7      58 .. 0.74
   2 ?   10.0   0.0   0.00026      0.66      54     103 ..      97     146 ..      83     148 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.007
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2 64 keeLeerketlekeiktlekqleklekeleelke 97
                 +++L + k++l+ e++ l+++ ++l+   ++++e
   KHJ33095.1 18 LQQLSQVKKQLDDELDHLTNSFSQLRGAQTKFQE 51
                 4677777777777777777777777777666665 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00026
                  EEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT CS
  Prefoldin_2  54 vlvkqdkeevkeeLeerketlekeiktlekqleklekeleelkeelqkkl 103
                    v+++ +++k+  e+r ++l  ++ktle+ l+ + ++ + ++e+l++k+
   KHJ33095.1  97 FYVEKTTDDAKKFYEARVKDLGSNLKTLESILQGKVNNSRVVEEVLRQKI 146
                  56899999999999999999999999999999999999999999999986 PP

>> MIS13  Mis12-Mtw1 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.5   3.3e-05     0.085     221     272 ..      15      66 ..       2      69 .. 0.83
   2 ?   -0.9   0.0      0.31     8e+02     231     270 ..     107     142 ..      97     156 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.3e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTSTTTSS CS
       MIS13 221 qrilsdnanveskletkvDeLqdsvhkLdsaskalnelstqklqklsrllak 272
                 +  l++ ++v+++l++++D+L +s  +L  a+  ++e +++  + +s ++++
  KHJ33095.1  15 NLSLQQLSQVKKQLDDELDHLTNSFSQLRGAQTKFQECARSIENGVSPAIME 66 
                 456899*********************************9999888877776 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.31
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTSTTT CS
       MIS13 231 eskletkvDeLqdsvhkLdsaskalnelstqklqklsrll 270
                 ++  e +v+ L  + ++L+s  ++  ++ ++ +  ++ +l
  KHJ33095.1 107 KKFYEARVKDLGSNLKTLES--ILQGKVNNSRV--VEEVL 142
                 45557788888888888887..55556665555..44444 PP

>> DUF4164  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.2    0.0016       4.2       4      42 ..      19      57 ..       8      59 .. 0.80
   2 ?    4.5   0.1     0.016        42       7      36 ..     111     140 ..     104     153 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0016
     DUF4164  4 keleaaltrLeaaldsLEkavdrrleaerkrdeleaeie 42
                ++l+++ ++L+  ld L+++  + + a+ k +e ++ ie
  KHJ33095.1 19 QQLSQVKKQLDDELDHLTNSFSQLRGAQTKFQECARSIE 57
                567888888888888888888888888888888777775 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.016
     DUF4164   7 eaaltrLeaaldsLEkavdrrleaerkrde 36 
                 ea  ++L   l++LE+ ++ ++++ r  +e
  KHJ33095.1 111 EARVKDLGSNLKTLESILQGKVNNSRVVEE 140
                 666789999999999999999999887654 PP

>> Cortex-I_coil  Cortexillin I, coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.7   0.00012      0.32      22      75 ..       8      57 ..       2      66 .. 0.84
   2 ?    1.6   0.1      0.12   3.1e+02       4      39 ..     107     145 ..     104     150 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00012
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Cortex-I_coil 22 enslesekvsreelikqkdelesllasleseaaerekrlreleakldealknle 75
                   + s+e e +s ++l + k++l++ l  l +       +lr  ++k++e  +++e
     KHJ33095.1  8 QTSIELENLSLQQLSQVKKQLDDELDHLTNSFS----QLRGAQTKFQECARSIE 57
                   789**********************99987654....47777788877777776 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.12
                    XXXXXXXXXXHHHHHHHHHHHHHHHH.HHH..HHHHHHH CS
  Cortex-I_coil   4 kerleasknelanklaglenslesek.vsr..eelikqk 39 
                    k+  ea  ++l ++l +le  l+++   sr  ee+++qk
     KHJ33095.1 107 KKFYEARVKDLGSNLKTLESILQGKVnNSRvvEEVLRQK 145
                    566788889999999999988887531233335666665 PP

>> DUF883  Bacterial protein of unknown function (DUF883)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00074       1.9      22      69 ..      14      60 ..       2      72 .. 0.76
   2 ?    2.0   0.1      0.13   3.3e+02       5      36 ..     115     146 ..      99     151 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00074
      DUF883 22 adeageeaeelRerleerlerarerlrdaeeavaerakeaaeaaddyV 69
                ++ + +++++++++l+++l+++ +++++++  ++ + +e a++ ++ V
  KHJ33095.1 14 ENLSLQQLSQVKKQLDDELDHLTNSFSQLRG-AQTKFQECARSIENGV 60
                5678899***************999887766.6777777776666544 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.13
      DUF883   5 aeleslladleellkeaadeageeaeelRerl 36 
                 ++l s l++le++l+ + ++++   e lR+++
  KHJ33095.1 115 KDLGSNLKTLESILQGKVNNSRVVEEVLRQKI 146
                 45555566677777777777766666666665 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.3   0.00024      0.62      48      89 ..      19      60 ..       3      67 .. 0.54
   2 ?    1.1   0.1      0.15   3.9e+02      58      82 ..     104     128 ..      97     152 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00024
     DUF1664 48 kqleqvseslaatkrhLssridrvdkkldeqkeiskeikeev 89
                +ql qv+++l +  +hL++   ++   + + +e++++i++ v
  KHJ33095.1 19 QQLSQVKKQLDDELDHLTNSFSQLRGAQTKFQECARSIENGV 60
                345555555555555555555555555555555555555444 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.15
     DUF1664  58 aatkrhLssridrvdkkldeqkeis 82 
                  ++k+  ++r++ ++++l+  + i 
  KHJ33095.1 104 DDAKKFYEARVKDLGSNLKTLESIL 128
                 4555555666666666655555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1336  (0.0745161); expected 358.6 (0.02)
Passed bias filter:                      940  (0.052429); expected 358.6 (0.02)
Passed Vit filter:                        98  (0.005466); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 1196.88
//
Query:       KHJ33096.1  [L=650]
Description: putative outer membrane protein iml2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   5.1e-112  375.0   2.1   6.6e-112  374.7   2.1    1.1  1  DUF3808      Protein of unknown function (DUF3808)
  ------ inclusion threshold ------
      0.012   15.7   0.3      0.064   13.4   0.3    2.4  1  CIDR1_gamma  Cysteine-Rich Interdomain Region 1 gamma
      0.032   13.9   0.0        0.1   12.3   0.0    1.8  1  HrpB1_HrpK   Bacterial type III secretion protein (HrpB1_HrpK
      0.057   13.3   0.2       0.18   11.7   0.0    2.0  2  TPR_10       Tetratricopeptide repeat
      0.058   13.9   0.6        6.9    7.3   0.0    2.9  3  TPR_19       Tetratricopeptide repeat
      0.076   13.2   2.3        1.4    9.2   0.1    3.7  3  TPR_2        Tetratricopeptide repeat
      0.091   13.3   0.1       0.44   11.1   0.1    2.2  1  DUF1240      Protein of unknown function (DUF1240)
       0.35   11.2   7.1       0.84   10.0   0.1    4.4  5  TPR_8        Tetratricopeptide repeat
       0.83    9.9   4.6          2    8.7   0.1    3.5  4  ANAPC3       Anaphase-promoting complex, cyclosome, subunit 3


Domain annotation for each model (and alignments):
>> DUF3808  Protein of unknown function (DUF3808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  374.7   2.1  3.3e-115  6.6e-112       2     477 .]      29     549 ..      28     549 .. 0.92

  Alignments for each domain:
  == domain 1  score: 374.7 bits;  conditional E-value: 3.3e-115
     DUF3808   2 qaldlvLndkfeeaeellkeaskeSslhalgrgviafleAvltfepekmkkAsealkeaeklceksrkkaqkneskqnlssdslyepgleaevcyaeal 100
                 +al l+Lnd++  ae+ l+  s +Ss+h  g+g+ +f+ ++l+ e e +k+As++++eae+ + ++ k+aqk +  ++ +s  +y+pg+e+ +cya +l
  KHJ33096.1  29 DALLLLLNDDIVSAEKVLN--SADSSYHLGGQGISKFISSMLGAESELLKDASKTIQEAESRAWEDIKRAQKDS--TAFRS-RIYPPGTEYLLCYAVSL 122
                 6899**************8..7889***********************************************99..33355.9**************** PP

     DUF3808 101 LlkAlLtflseslvefiKgglklRkaYqiykeilkeikklekkkrskt................................eeeeesllseekn...sqa 164
                 L  A+  ++s s+v++i g+ klRka+ i++ i++ +  + +k++ +                                  +e+ +l++++ +   +++
  KHJ33096.1 123 LTGAICAVMSGSVVQAISGFTKLRKAFLILDGIMEIEVTYFEKYKPAGqstsiksettprdnnssakanvldpnrasisiDSESLELSNYNLKiceITS 221
                 ***********************************9998887776666899**********************99998773333443344444777999 PP

     DUF3808 165 eideflesGvnlgfGilqlviSll.PpailklLsvvGFsGdreeGLrlLweasksrnlraalallaLlfYytgvvqvldi....d..dg..lkapleel 254
                  +d f++sG++l++Gil +v+S++  p + k+L ++GF+Gdr++G+  Lw++s ++n+++a+a +++l+Yy+g++ ++di    d  d+    +p+ ++
  KHJ33096.1 222 YTDTFIHSGTRLCYGILLVVFSMIeNPIFTKILYLIGFKGDRKRGMLYLWQSSRFNNFNSAIAGITILMYYSGLIGFCDIlptdDraDEdlSAYPRTKI 320
                 ************************558899**************************************************9875155334799****** PP

     DUF3808 255 eelLlksrkrfPksalwllfearieslkgnldeAlelleeiieesqselkqvkhlclfelaltlvylheykeaaesfleLlklskwSkalYtYlaaacl 353
                 ++lL ++r ++P+s+ w l+ear+++ + nl++A+++l    e+s+s+ kq+  +  felal  ++ h+y+  a+s  ++ + s+wS +lY+Yl++a +
  KHJ33096.1 321 QNLLSEMRTQYPESKFWRLEEARLLAFNRNLTDAVKILA---ENSKSNFKQISTISTFELALSSMFHHNYELMAKSWIQCEDQSSWSPTLYAYLTGAAY 416
                 ***************************************...689****************************************************** PP

     DUF3808 354 lelgre......ekkaeakekaeelfkevpkllqkkag..kslplekFilrKverfkarkkekkselldavlvspvlEliYvwngfsrmskeeleeesv 444
                  el+re      + ++e k+ka ++f++ p+l +k++   k+lp++ +i+rK++++++r+k ++++l +a++vsp++E+iY+w+g ++   +el  +s+
  KHJ33096.1 417 FELYREkkkkdpAIAKELKQKAITYFRKGPPLSGKQKLmsKQLPFDMYIVRKCQKWEERAKAWNIDLTEAIGVSPLEEMIYLWSGSKKQNLDELH-KSL 514
                 ******8888887778899****************99899*******************999*************************99999999.999 PP

     DUF3808 445 kkleeka.anke.seeeeDdellkkLLkglvlrrl 477
                 + l + + + +e ++ + D++++ + L ++v+r+l
  KHJ33096.1 515 NVLSWDRtDLPEkHKSNLDETAVHAVLMACVYRNL 549
                 999888875555456888***************97 PP

>> CIDR1_gamma  Cysteine-Rich Interdomain Region 1 gamma
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.3   3.2e-05     0.064      16      41 ..     556     583 ..     545     590 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.2e-05
  CIDR1_gamma  16 keylkn..lfkesrLFkgirkQkWkCkf 41 
                   e l++  l+ + ++Fkg  k+ W+C  
   KHJ33096.1 556 REILQKnvLCHDKQIFKGHLKDDWTCAS 583
                  334444889*****************76 PP

>> HrpB1_HrpK  Bacterial type III secretion protein (HrpB1_HrpK)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0     5e-05       0.1      27      74 ..     317     364 ..     307     407 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 5e-05
  HrpB1_HrpK  27 tedaellLdalrvLrPevaeldllegvlliergrweeAlrlLreveae 74 
                  + +++lL ++r   Pe +  +l e+ ll  ++++++A+++L+e +++
  KHJ33096.1 317 RTKIQNLLSEMRTQYPESKFWRLEEARLLAFNRNLTDAVKILAENSKS 364
                 57899*************************************997754 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.8   7.6e+03       9      26 ..     342     359 ..     342     360 .. 0.79
   2 ?   11.7   0.0   8.9e-05      0.18       8      29 ..     542     563 ..     535     568 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.8
      TPR_10   9 analrqrgrydeAealle 26 
                 a++l   +++++A+++l 
  KHJ33096.1 342 ARLLAFNRNLTDAVKILA 359
                 567778899999*99986 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 8.9e-05
      TPR_10   8 LanalrqrgrydeAealleeal 29 
                 +a+++r++ +y+eA+++l++ +
  KHJ33096.1 542 MACVYRNLEKYQEAREILQKNV 563
                 79***************99855 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       6.7   1.3e+04      35      51 ..      33      49 ..      30      53 .. 0.64
   2 ?    7.3   0.0    0.0034       6.9      10      50 ..     320     360 ..     317     371 .. 0.91
   3 ?    3.6   0.1     0.049        99      30      49 ..     541     560 ..     533     563 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 6.7
      TPR_19 35 llalgqldeAealLdal 51
                ll + ++  Ae++L+ +
  KHJ33096.1 33 LLLNDDIVSAEKVLNSA 49
                55556666777777754 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0034
      TPR_19  10 AlalleqalqedpknaearllLAeallalgqldeAealLda 50 
                  ++ll+++ +++p++   rl  A++l  + +l++A ++L++
  KHJ33096.1 320 IQNLLSEMRTQYPESKFWRLEEARLLAFNRNLTDAVKILAE 360
                 5789***********************************86 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.049
      TPR_19  30 lLAeallalgqldeAealLd 49 
                 l+A ++ +l  ++eA+++L+
  KHJ33096.1 541 LMACVYRNLEKYQEAREILQ 560
                 68889999**********98 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0         1     2e+03      18      26 ..     436     444 ..     430     445 .. 0.79
   2 ?    9.2   0.1   0.00071       1.4       7      26 ..     542     561 ..     540     561 .. 0.90
   3 ?    0.8   0.0      0.36   7.1e+02       1      18 [.     582     599 ..     582     600 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1
       TPR_2  18 eeAleafek 26 
                 ++A+ +f+k
  KHJ33096.1 436 QKAITYFRK 444
                 799999987 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00071
       TPR_2   7 lGlayyklgdyeeAleafek 26 
                 ++++y++l +y+eA+e ++k
  KHJ33096.1 542 MACVYRNLEKYQEAREILQK 561
                 799************98886 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.36
       TPR_2   1 aealynlGlayyklgdye 18 
                 a a+y++++++++ +d++
  KHJ33096.1 582 ASAHYEMACIAWQEKDLK 599
                 679*********999986 PP

>> DUF1240  Protein of unknown function (DUF1240)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   0.00022      0.44      40      87 ..     361     408 ..     342     411 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00022
     DUF1240  40 dklvkllaiiailsfvlslflslYvdyklksegYlvCekiswmsPnkY 87 
                 ++  ++ +i +i +f l+l + +  +y+l  ++++ Ce  s  sP+ Y
  KHJ33096.1 361 NSKSNFKQISTISTFELALSSMFHHNYELMAKSWIQCEDQSSWSPTLY 408
                 44445555666777889999999*****************999**998 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       2.6   5.1e+03      10      22 ..     419     431 ..     418     441 .. 0.76
   2 ?    0.1   0.1      0.65   1.3e+03      15      26 ..     433     444 ..     429     445 .. 0.81
   3 ?   10.0   0.1   0.00042      0.84       6      26 ..     541     561 ..     540     561 .. 0.92
   4 ?    1.0   0.0      0.32   6.4e+02       1      18 [.     582     599 ..     582     601 .. 0.89
   5 ?   -2.3   0.1       3.7   7.4e+03      19      29 ..     609     619 ..     604     620 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.6
                 HHHHTT-HHHHHH CS
       TPR_8  10 iylklgdyeeAke 22 
                 +y+++++++ A++
  KHJ33096.1 419 LYREKKKKDPAIA 431
                 6788888877764 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.65
                 T-HHHHHHHHHH CS
       TPR_8  15 gdyeeAkeyyek 26 
                 + +++A+ y++k
  KHJ33096.1 433 ELKQKAITYFRK 444
                 56789*****98 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00042
                 HHHHHHHHTT-HHHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyyek 26 
                 +++++y++l++y+eA e ++k
  KHJ33096.1 541 LMACVYRNLEKYQEAREILQK 561
                 689**************9987 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.32
                 CCHHHHHHHHHHHTT-HH CS
       TPR_8   1 aeayynlgsiylklgdye 18 
                 a+a+y +++i ++ +d++
  KHJ33096.1 582 ASAHYEMACIAWQEKDLK 599
                 6799**********9985 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 3.7
                 HHHHHHHHHHH CS
       TPR_8  19 eAkeyyekale 29 
                 e ke++ek+ +
  KHJ33096.1 609 ECKEWLEKVQK 619
                 889*****977 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.41   8.1e+02      29      49 ..      29      49 ..       8      56 .. 0.75
   2 ?   -1.3   0.0       1.4   2.7e+03      15      53 ..     324     366 ..     320     388 .. 0.75
   3 ?   -2.0   0.1       2.2   4.5e+03      57      69 ..     407     419 ..     375     427 .. 0.63
   4 ?    8.7   0.1     0.001         2      58      81 ..     538     561 ..     524     567 .. 0.67

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.41
                HHHHHHHTT-HHHHHHHHHCT CS
      ANAPC3 29 lAlclylngqykrAyellrka 49
                 Al l+ln +  +A ++l++a
  KHJ33096.1 29 DALLLLLNDDIVSAEKVLNSA 49
                4999*************9998 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.4
                 HH.HHH--HHHHHH.H..HHHHHHTT-HHHHHHHHHCT.SHHH CS
      ANAPC3  15 llaaetespedayl.l..AlclylngqykrAyellrka.klns 53 
                 l ++ t+ pe+ ++ l  A  l  n + + A ++l ++ k+n 
  KHJ33096.1 324 LSEMRTQYPESKFWrLeeARLLAFNRNLTDAVKILAENsKSNF 366
                 4567788888888852668899999999999999999866554 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 2.2
                 HHHHHHHHHHHHT CS
      ANAPC3  57 gcrylfAqcllkL 69 
                  ++yl++ ++++L
  KHJ33096.1 407 LYAYLTGAAYFEL 419
                 6778888888877 PP

  == domain 4  score: 8.7 bits;  conditional E-value: 0.001
                 HHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  58 crylfAqcllkLkkyeeAiaaLek 81 
                  ++l+A ++  L+ky+eA+ +L+k
  KHJ33096.1 538 HAVLMACVYRNLEKYQEAREILQK 561
                 334455445588999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (650 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       960  (0.0535445); expected 358.6 (0.02)
Passed bias filter:                      576  (0.0321267); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.43
# Mc/sec: 4553.50
//
Query:       KHJ33097.1  [L=173]
Description: hypothetical protein EV44_g3846 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.01   16.1   0.0      0.015   15.5   0.0    1.4  1  Hat1_N    Histone acetyl transferase HAT1 N-terminus
      0.098   13.6   0.0       0.15   13.0   0.0    1.3  1  NAM       No apical meristem (NAM) protein


Domain annotation for each model (and alignments):
>> Hat1_N  Histone acetyl transferase HAT1 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   0.0   1.7e-06     0.015      94     148 ..      66     119 ..       7     122 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.7e-06
                 -T..ES-HHHHHHHHHHHH.H--GGSEEEEEETTEE..EEEEEEESSSHHHHHHH CS
      Hat1_N  94 peeafkskeeFekaleekaksfkppGelihsytrekkefeiykasladpavrelh 148
                 p  + + + +F ++ +e   s +++G+li+s t ++  fe+y++++++p+  +++
  KHJ33097.1  66 PHRYKELNISFVQQSKEIYLSRRILGRLIASRTGHG-VFEVYHSQFSHPETSKYV 119
                 556677778999***9999****************9.7************99986 PP

>> NAM  No apical meristem (NAM) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.7e-05      0.15      16      72 ..      83     142 ..      67     164 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.7e-05
         NAM  16 yyLrrkvlgealeesdiiaevdldkld..ePwdlpgk.kkegeeewyffsprkrkekrra 72 
                  yL r++lg+   ++  + + ++++ +  +P+  + +  + ++ e +ff++r+r+++r+a
  KHJ33097.1  83 IYLSRRILGRLIASRTGHGVFEVYHSQfsHPETSKYVcGAVKSPEHFFFCRRSRRAARKA 142
                 4999999999888888887788888877899665555955566666*****997776422 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1236.27
//
Query:       KHJ33098.1  [L=184]
Description: hypothetical protein EV44_g1775 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      565  (0.0315132); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.18s 00:00:00.62 Elapsed: 00:00:00.35
# Mc/sec: 1559.39
//
Query:       KHJ33099.1  [L=679]
Description: putative abc transporter protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-28  100.3   0.0    7.4e-15   55.7   0.0    3.7  2  ABC_tran      ABC transporter
    9.1e-13   48.7   0.8     0.0037   17.1   0.1    3.6  3  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
    6.6e-06   25.8   0.0       0.13   12.0   0.0    2.4  2  AAA_29        P-loop containing region of AAA domain
    8.2e-06   26.5   3.8      0.013   16.0   1.0    2.8  2  AAA_23        AAA domain
    0.00023   21.3   0.2       0.32   11.3   0.1    2.5  2  SbcCD_C       Putative exonuclease SbcCD, C subunit
    0.00024   21.4   0.0       0.74   10.1   0.0    3.4  4  AAA_22        AAA domain
     0.0003   21.1   0.0       0.27   11.5   0.0    2.4  2  AAA_28        AAA domain
     0.0009   19.3   0.0        3.2    7.8   0.0    3.8  4  AAA_14        AAA domain
     0.0013   19.2   0.0        1.5    9.2   0.0    2.5  2  AAA_16        AAA ATPase domain
     0.0022   18.0   0.2        1.3    8.9   0.0    3.2  3  ATPase_2      ATPase domain predominantly from Archaea
     0.0043   17.1   0.0        1.7    8.8   0.0    2.7  2  MMR_HSR1      50S ribosome-binding GTPase
     0.0047   16.7   0.0        1.8    8.3   0.0    2.3  2  AAA_24        AAA domain
     0.0056   16.9   0.1        3.7    7.7   0.0    2.6  2  AAA_33        AAA domain
     0.0057   16.1   0.6        2.7    7.4   0.0    3.5  4  SMC_N         RecF/RecN/SMC N terminal domain
     0.0085   16.5   0.2        8.6    6.8   0.0    3.8  4  AAA           ATPase family associated with various cellular 
     0.0086   16.2   0.1       0.11   12.5   0.0    2.6  3  Dynamin_N     Dynamin family
       0.01   15.3   0.0          3    7.2   0.0    2.3  2  SRPRB         Signal recognition particle receptor beta subun
  ------ inclusion threshold ------
      0.012   15.2   0.0        1.1    8.8   0.0    2.4  2  cobW          CobW/HypB/UreG, nucleotide-binding domain
      0.015   15.0   0.4         26    4.5   0.0    4.1  5  IstB_IS21     IstB-like ATP binding protein
      0.018   15.6   0.0         12    6.5   0.0    2.7  2  AAA_18        AAA domain
      0.027   14.4   0.0          4    7.4   0.0    2.3  2  MobB          Molybdopterin guanine dinucleotide synthesis pr
      0.029   14.3   0.0        4.1    7.3   0.0    2.3  2  RsgA_GTPase   RsgA GTPase
      0.033   14.1   0.2        1.8    8.5   0.0    3.0  2  NACHT         NACHT domain
      0.043   13.0   0.0       0.93    8.6   0.0    2.3  2  NB-ARC        NB-ARC domain
      0.067   12.9   0.0        2.1    8.1   0.0    2.3  2  PduV-EutP     Ethanolamine utilisation - propanediol utilisat
      0.069   12.2   0.0         10    5.1   0.0    2.4  2  T2SSE         Type II/IV secretion system protein
        0.1   12.0   0.0        4.2    6.7   0.0    2.5  2  TniB          Bacterial TniB protein
       0.13   12.1   0.2         25    4.7   0.0    3.3  3  NTPase_1      NTPase
       0.15   11.7   3.6        9.5    5.8   0.0    2.9  4  AAA_15        AAA ATPase domain
       0.16    9.5   0.0       0.88    7.0   0.1    1.8  2  DUF3584       Protein of unknown function (DUF3584)
       0.17   11.2   0.0        2.6    7.3   0.0    2.1  2  FtsK_SpoIIIE  FtsK/SpoIIIE family
       0.18   11.5   0.0         11    5.7   0.0    2.3  2  ATP_bind_1    Conserved hypothetical ATP binding protein


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   0.0   1.3e-17   7.4e-15      10     137 .]      66     233 ..      53     233 .. 0.71
   2 !   39.9   0.0     1e-12   5.6e-10       5     136 ..     401     573 ..     397     574 .. 0.77

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 1.3e-17
                 TTSEEEEEESTTSSHHHHHHHHTTSS--SEEEE....EETTCEGGGB-HHHCCHCEEEE-SS..........--S-TTSBHHHH............... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxx............... RF
    ABC_tran  10 egekvaivGenGaGKStLlkllagllkpteGei....lldgkdlkeqeleslrkeigvlpqe..........pqlfpeltvren............... 79 
                 + e +aivG++ +GK+tLl++l g++     +             + ++e l++++ + pq+          + l++++ +r                 
  KHJ33099.1  66 REEHWAIVGPSSSGKTTLLEVLNGEHICVPPTArsfpF------LDGKTENLSRNSLFNPQTaiklvkfdsdNGLDSQI-IRGAylsaryetrrenedf 157
                 5799**********************996666633341......33333333333333333321110000214444444.4444888888888888888 PP

                 .................HHHTC.....HHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 .................xxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  80 .................esdee.....iekalsklglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                                  +s+ +     +  ++ +lgl+e+ d +v     +LS Gqk+r  +a+allk+p++lllDEp+a
  KHJ33099.1 158 clrdylegntelnpmpnTSETKsyplgLRWLVGELGLIEFMDMPV----LNLSNGQKRRARIAKALLKNPDILLLDEPFA 233
                 8888888888888877633333778999*****************....*****************************85 PP

  == domain 2  score: 39.9 bits;  conditional E-value: 1e-12
                 EEEEETTSEEEEEESTTSSHHHHHHHHTTSS--.SEEEEEETTCEGGG......B-HHHCCHCEEEE-SS.--S-TTSBHHHH................ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx......xxxxxxxxxxxxxxxx.xxxxxxxxxxxx................ RF
    ABC_tran   5 slklkegekvaivGenGaGKStLlkllagllkp.teGeilldgkdlke......qeleslrkeigvlpqe.pqlfpeltvren................ 79 
                  +++++ge+++i+G+nG+GK+tLl+l++  + +  +  i+l g++         +++ +l+++ig  + e + + p++ + ++                
  KHJ33099.1 401 WWTVRRGERWGIFGPNGSGKTTLLSLITSDHPQtYALPIKLFGQSRLPepgklgISIFQLQAKIGHSSPElHAHMPRSFNLRQvlesawsdtpqgspnl 499
                 5899***********************99876534555666666555568888888888888888887776444444433333588899999******* PP

                 ..HHHTCHHHHHHHSTTGG..................TTCBGESTTS..GGS-HHHHHHHHHHHHHHHTSSEEEEESTT CS
                 ..xxxxxxxxxxxxxxxxx..................xxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  80 ..esdeeiekalsklglke..................lkdtvvkssp..ssLSgGqkqrvalarallkkpkllllDEpt 136
                   e++++i+++l++++ +                   ++d+         ++    ++  +  ra++k+p++++lDE++
  KHJ33099.1 500 ncEAQKRIDAFLRWFEYDLcpkstvraenfpceratyWADK-----LlfGKIPSSSQKIAMFLRAIIKEPDIIILDEAF 573
                 9999999*********9997777777777666444433333.....1458888888999999***************97 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   0.00024      0.13       3      20 ..      71      88 ..      71     164 .. 0.88
   2 !   17.1   0.1   6.7e-06    0.0037     233     273 ..     201     242 ..     195     263 .. 0.79
   3 !   15.7   0.1   1.7e-05    0.0098       4      19 ..     412     427 ..     411     462 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00024
      AAA_21  3 vliGpNgsGKSnLLdald 20
                +++Gp +sGK++LL+ l 
  KHJ33099.1 71 AIVGPSSSGKTTLLEVLN 88
                69*************995 PP

  == domain 2  score: 17.1 bits;  conditional E-value: 6.7e-06
      AAA_21 233 parelSdGtkrllalltallralkkgsllliDEpEngLHP....k 273
                 p+ +lS G+kr ++++ all  +   ++ll+DEp +gL+P     
  KHJ33099.1 201 PVLNLSNGQKRRARIAKALLKNP---DILLLDEPFAGLDPitllD 242
                 66789***************999...9*************64442 PP

  == domain 3  score: 15.7 bits;  conditional E-value: 1.7e-05
      AAA_21   4 liGpNgsGKSnLLdal 19 
                 + GpNgsGK++LL ++
  KHJ33099.1 412 IFGPNGSGKTTLLSLI 427
                 89***********999 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00043      0.24      22      40 ..      67      85 ..      57     101 .. 0.80
   2 !   12.0   0.0   0.00023      0.13      19      39 ..     404     424 ..     396     434 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00043
      AAA_29 22 kgatlltGpsGsGKSTllD 40
                ++   ++Gps sGK+Tll 
  KHJ33099.1 67 EEHWAIVGPSSSGKTTLLE 85
                44689************95 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 0.00023
      AAA_29  19 idlkgatlltGpsGsGKSTll 39 
                 +++ +   + Gp+GsGK+Tll
  KHJ33099.1 404 VRRGERWGIFGPNGSGKTTLL 424
                 5544467799**********8 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0    0.0017      0.96      23      39 ..      71      87 ..      52      94 .. 0.81
   2 !   16.0   1.0   2.3e-05     0.013      24      40 ..     412     428 ..     411     429 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0017
      AAA_23 23 lItGpNGaGKTTildAi 39
                +I+Gp  +GKTT+l+ +
  KHJ33099.1 71 AIVGPSSSGKTTLLEVL 87
                8*************976 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 2.3e-05
      AAA_23  24 ItGpNGaGKTTildAik 40 
                 I+GpNG+GKTT+l  i+
  KHJ33099.1 412 IFGPNGSGKTTLLSLIT 428
                 9************8886 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0088       4.9      62      79 ..     221     238 ..     206     247 .. 0.84
   2 !   11.3   0.1   0.00057      0.32      63      84 ..     563     584 ..     553     589 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0088
     SbcCD_C  62 palrlvfLDEAFsklDee 79 
                 +++++++LDE F++lD+ 
  KHJ33099.1 221 KNPDILLLDEPFAGLDPI 238
                 5699************85 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00057
     SbcCD_C  63 alrlvfLDEAFsklDeesiatl 84 
                  +++++LDEAFs lD+  ++++
  KHJ33099.1 563 EPDIIILDEAFSCLDDVVRNRC 584
                 6899***********9998887 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0     0.016         9       6      25 ..      68      87 ..      65      98 .. 0.85
   2 ?   -1.4   0.0       4.6   2.6e+03      49      99 ..     176     230 ..     152     262 .. 0.66
   3 !   10.1   0.0    0.0013      0.74      10      33 ..     412     435 ..     411     488 .. 0.86
   4 ?   -1.9   0.0       6.7   3.7e+03      82     100 ..     556     572 ..     539     596 .. 0.71

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.016
      AAA_22  6 gilvvtGesGtGKTtllrrl 25
                 + +++G+s +GKTtll+ l
  KHJ33099.1 68 EHWAIVGPSSSGKTTLLEVL 87
                5779************9866 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 4.6
      AAA_22  49 sstsskdl.lrellralglelka.....erlsseellealeqalraravielliiDE 99 
                 s+t+s  l lr+l+ +lgl         +  + +  ++++++al +  +  +l++DE
  KHJ33099.1 176 SETKSYPLgLRWLVGELGLIEFMdmpvlNLSNGQKRRARIAKALLKNPD--ILLLDE 230
                 5555555566777777776555577665555556666777888877777..888888 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.0013
      AAA_22  10 vtGesGtGKTtllrrlleqldeea 33 
                 ++G+ G+GKTtll  +++ +++ +
  KHJ33099.1 412 IFGPNGSGKTTLLSLITSDHPQTY 435
                 89************9999987755 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 6.7
      AAA_22  82 leqalraravielliiDEa 100
                 + +a+ +   + ++i+DEa
  KHJ33099.1 556 FLRAIIKE--PDIIILDEA 572
                 34444444..4599***99 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0   0.00047      0.27       3      22 ..      71      90 ..      69     115 .. 0.82
   2 ?    7.1   0.0      0.01       5.8       4      22 ..     412     430 ..     409     446 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00047
      AAA_28  3 vitGgestGKTtlleaLaar 22
                +i+G++s+GKTtlle L+ +
  KHJ33099.1 71 AIVGPSSSGKTTLLEVLNGE 90
                79*************99743 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.01
      AAA_28   4 itGgestGKTtlleaLaar 22 
                 i+G+ ++GKTtll+ ++++
  KHJ33099.1 412 IFGPNGSGKTTLLSLITSD 430
                 89***********988765 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0058       3.2       6      47 ..      71     115 ..      66     135 .. 0.71
   2 ?   -1.0   0.0       2.9   1.6e+03      77     104 ..     323     351 ..     297     369 .. 0.80
   3 ?    5.3   0.0     0.035        19       7      26 ..     412     431 ..     408     442 .. 0.84
   4 ?    0.1   0.0       1.3   7.6e+02      54      76 ..     554     575 ..     536     622 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0058
      AAA_14   6 vitGaRrvGKTtllkqlikell...vkkesilyinldderdkkla 47 
                 +i+G+  +GKTtll+ l  e++    +++s+ +++ ++e++++++
  KHJ33099.1  71 AIVGPSSSGKTTLLEVLNGEHIcvpPTARSFPFLDGKTENLSRNS 115
                 799***********9999999875544555656665555554444 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.9
      AAA_14  77 pewekalkslvdeg.knldvivtGSnskl 104
                 + w + + + + ++  n d i tGS + +
  KHJ33099.1 323 KVWNQKIGRTYTDHmMNRDHITTGSTNDV 351
                 55777777777766688899999998866 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.035
      AAA_14   7 itGaRrvGKTtllkqlikel 26 
                 i G+  +GKTtll  + +++
  KHJ33099.1 412 IFGPNGSGKTTLLSLITSDH 431
                 88**********98887766 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 1.3
      AAA_14  54 elileklkeekktylflDEiqev 76 
                  ++l+ + + +  +++lDE+  +
  KHJ33099.1 554 AMFLRAIIK-EPDIIILDEAFSC 575
                 455555444.7899*****9777 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0    0.0026       1.5      23      45 ..      66      88 ..      53     140 .. 0.79
   2 ?    7.2   0.0     0.011       5.9      29      50 ..     412     433 ..     399     449 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0026
      AAA_16 23 rpelvllsGesGvGKsslvrell 45
                r+e   ++G+s +GK++l++ l 
  KHJ33099.1 66 REEHWAIVGPSSSGKTTLLEVLN 88
                5577789************8765 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.011
      AAA_16  29 lsGesGvGKsslvrellralek 50 
                 + G+ G+GK++l+  +     +
  KHJ33099.1 412 IFGPNGSGKTTLLSLITSDHPQ 433
                 67***********998865555 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.045        25      24      38 ..      71      85 ..      59      91 .. 0.84
   2 !    8.9   0.0    0.0023       1.3      25      41 ..     412     428 ..     406     437 .. 0.86
   3 ?   -0.4   0.0       1.6   8.7e+02     100     132 ..     547     577 ..     503     593 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.045
    ATPase_2 24 fiYGpegsGKtaLlk 38
                 i Gp +sGKt+Ll 
  KHJ33099.1 71 AIVGPSSSGKTTLLE 85
                588**********97 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0023
    ATPase_2  25 iYGpegsGKtaLlkeii 41 
                 i+Gp gsGKt+Ll  i 
  KHJ33099.1 412 IFGPNGSGKTTLLSLIT 428
                 9***********98765 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 1.6
    ATPase_2 100 klvfkaielllekikkkgkkiiiiiDelqklid 132
                     ++i+ +l++i k+    iii+De++   d
  KHJ33099.1 547 PSSSQKIAMFLRAIIKEPD--IIILDEAFSCLD 577
                 4556677777777777755..999***998775 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.0     0.003       1.7       3      23 ..      71      91 ..      69     228 .. 0.84
   2 ?    5.6   0.0     0.029        16       3      24 ..     411     432 ..     409     448 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.003
                EEEESTTSSHHHHHHHHHTST CS
    MMR_HSR1  3 aivGrpNvGKStLinaltgek 23
                aivG + +GK+tL+  l ge+
  KHJ33099.1 71 AIVGPSSSGKTTLLEVLNGEH 91
                8**************998874 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.029
                 EEEESTTSSHHHHHHHHHTSTE CS
    MMR_HSR1   3 aivGrpNvGKStLinaltgeka 24 
                 +i+G   +GK+tL++ +t ++ 
  KHJ33099.1 411 GIFGPNGSGKTTLLSLITSDHP 432
                 89*************9998754 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0     0.016       8.8       6      22 ..      71      87 ..      67     135 .. 0.85
   2 !    8.3   0.0    0.0031       1.8       4      22 ..     409     427 ..     406     439 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.016
      AAA_24  6 liyGpsgiGKTtlakel 22
                +i+Gps +GKTtl+  l
  KHJ33099.1 71 AIVGPSSSGKTTLLEVL 87
                79***********9877 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0031
      AAA_24   4 kiliyGpsgiGKTtlakel 22 
                 +  i+Gp+g+GKTtl++ +
  KHJ33099.1 409 RWGIFGPNGSGKTTLLSLI 427
                 5679***********9876 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0    0.0067       3.7       4      19 ..      72      87 ..      70      97 .. 0.84
   2 ?    6.5   0.0     0.016       8.9       5      19 ..     413     427 ..     410     437 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0067
      AAA_33  4 lvGlpGsGKstlaerl 19
                +vG++ sGK+tl+e l
  KHJ33099.1 72 IVGPSSSGKTTLLEVL 87
                79**********9976 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.016
      AAA_33   5 vGlpGsGKstlaerl 19 
                  G++GsGK+tl+  +
  KHJ33099.1 413 FGPNGSGKTTLLSLI 427
                 6*********98755 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.088        49      21      43 ..      64      86 ..      53      88 .. 0.80
   2 ?    1.1   0.0      0.39   2.2e+02     136     199 ..     204     264 ..     108     270 .. 0.79
   3 ?   -3.4   0.1       9.4   5.3e+03      68     114 ..     302     325 ..     288     350 .. 0.49
   4 !    7.4   0.0    0.0048       2.7      29      42 ..     412     425 ..     406     428 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.088
                ETTSSEEEEEESTTSSHHHHHHH CS
                xxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 21 pfsksftaivGpNGSGKsnlldA 43
                p  +++ aivGp  SGK+ ll+ 
  KHJ33099.1 64 PDREEHWAIVGPSSSGKTTLLEV 86
                55677899**********99985 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.39
                 CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTT.SEEEEE-SSH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx RF
       SMC_N 136 lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkekskn.aQfivislre 199
                 +LS G+k  + +a        k   + llDe  a LD      + ++l +  k   Q + islr 
  KHJ33099.1 204 NLSNGQKRRARIA----KALLKNPDILLLDEPFAGLDPITLLDLKSMLYTLVKAhNQRLLISLRP 264
                 5666666654443....33345556889********************9887765999**99996 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 9.4
                 BTTCSSTTEEEEEEEEEETTEESSSSSSCEEEEEEEETTSEEEEEET CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  68 skekasvkkaeveitfdnedkklkiekeevsisrrvkrkgeseykin 114
                 +++++ vk+ e+ +                         ++s+ k+ 
  KHJ33099.1 302 RNQREDVKSTEIGVNE-----------------------ENSKNKVW 325
                 3444444444444432.......................22222222 PP

  == domain 4  score: 7.4 bits;  conditional E-value: 0.0048
                 EEESTTSSHHHHHH CS
                 xxxxxxxxxxxxxx RF
       SMC_N  29 ivGpNGSGKsnlld 42 
                 i GpNGSGK+ ll 
  KHJ33099.1 412 IFGPNGSGKTTLLS 425
                 99********9975 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.57   3.2e+02       3      21 ..      72      90 ..      71     121 .. 0.80
   2 ?   -1.4   0.0       5.3     3e+03      48      66 ..     213     230 ..     189     231 .. 0.68
   3 ?    6.8   0.0     0.015       8.6       3      21 ..     412     430 ..     411     463 .. 0.85
   4 ?    2.5   0.0      0.33   1.9e+02      41      67 ..     548     572 ..     533     608 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.57
                EESSTTSSHHHHHHHHHHH CS
         AAA  3 lyGppGtGKTllakavake 21
                ++Gp   GKT+l + +  e
  KHJ33099.1 72 IVGPSSSGKTTLLEVLNGE 90
                68**********9987666 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 5.3
                 HHHHHHHHTSTSEEEEEET CS
         AAA  48 elfkeakekakpsilfiDE 66 
                 + +++a  k +p il++DE
  KHJ33099.1 213 ARIAKALLK-NPDILLLDE 230
                 333333333.499****99 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.015
                 EESSTTSSHHHHHHHHHHH CS
         AAA   3 lyGppGtGKTllakavake 21 
                 ++Gp G GKT+l + + ++
  KHJ33099.1 412 IFGPNGSGKTTLLSLITSD 430
                 58**********9998765 PP

  == domain 4  score: 2.5 bits;  conditional E-value: 0.33
                 HHHHHHHHHHHHHHHTSTSEEEEEETG CS
         AAA  41 esekkirelfkeakekakpsilfiDEi 67 
                  s++ki+++++++ ++  p i+++DE+
  KHJ33099.1 548 SSSQKIAMFLRAIIKE--PDIIILDEA 572
                 5778888888776544..8*******7 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0    0.0002      0.11       2      24 ..      71      93 ..      71     116 .. 0.93
   2 ?   -2.6   0.0       8.7   4.9e+03     103     133 ..     195     227 ..     159     228 .. 0.78
   3 ?   -0.3   0.0       1.8   9.9e+02       3      19 ..     412     428 ..     411     433 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.0002
                EEEEBTTTTHHHHHHHHHTS--S CS
   Dynamin_N  2 avvGsqSsGKSSvlnaLlgedil 24
                a+vG  SsGK+++l+ L ge+i 
  KHJ33099.1 71 AIVGPSSSGKTTLLEVLNGEHIC 93
                69******************985 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 8.7
                 EEEEE---B-SSSGTTS..HHHHHHHSTTEEEE CS
   Dynamin_N 103 ltlvDlPGldsvnkrdq..elvkeyikkadiil 133
                 ++++D+P l+ +n ++   +++k ++k+ di+l
  KHJ33099.1 195 IEFMDMPVLNLSNGQKRraRIAKALLKNPDILL 227
                 678888888876655555577777779999987 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 1.8
                 EEEBTTTTHHHHHHHHH CS
   Dynamin_N   3 vvGsqSsGKSSvlnaLl 19 
                 ++G   sGK+++l  ++
  KHJ33099.1 412 IFGPNGSGKTTLLSLIT 428
                 79**********97765 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0054         3       7      26 ..      71      90 ..      65     140 .. 0.85
   2 ?    5.7   0.0     0.016       8.7       8      27 ..     412     431 ..     408     440 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0054
                EEE-STTSSHHHHHHHHHHS CS
       SRPRB  7 llvGlsdsGKTslftrLttd 26
                 +vG+s sGKT+l++ L  +
  KHJ33099.1 71 AIVGPSSSGKTTLLEVLNGE 90
                69************999766 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.016
                 EE-STTSSHHHHHHHHHHSS CS
       SRPRB   8 lvGlsdsGKTslftrLttds 27 
                 + G+  sGKT+l+ ++t+d+
  KHJ33099.1 412 IFGPNGSGKTTLLSLITSDH 431
                 78**************9985 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.071        40       5      19 ..      72      86 ..      69      91 .. 0.85
   2 ?    8.8   0.0    0.0019       1.1       5      22 ..     412     429 ..     409     439 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.071
                EEESTTCCHHHHHHH CS
        cobW  5 ltGflGsGKTtLlnh 19
                ++G+  sGKTtLl+ 
  KHJ33099.1 72 IVGPSSSGKTTLLEV 86
                899999*******86 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.0019
                 EEESTTCCHHHHHHHHHC CS
        cobW   5 ltGflGsGKTtLlnhlle 22 
                 + G+ GsGKTtLl+ +++
  KHJ33099.1 412 IFGPNGSGKTTLLSLITS 429
                 789**********98773 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.046        26      41      67 ..      61      87 ..      37      94 .. 0.83
   2 ?   -1.6   0.0       3.4   1.9e+03       4      49 ..     108     154 ..     105     158 .. 0.81
   3 ?    1.6   0.0      0.36     2e+02      90     154 ..     203     271 ..     197     276 .. 0.77
   4 ?    3.1   0.0      0.12        67      36      63 ..     395     423 ..     371     430 .. 0.74
   5 ?   -2.8   0.0       8.3   4.6e+03      98     117 ..     552     572 ..     547     588 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.046
   IstB_IS21 41 lsfiekkenivllGpsGvGKshlaial 67
                 sf +++e  +++Gps  GK+ l   l
  KHJ33099.1 61 KSFPDREEHWAIVGPSSSGKTTLLEVL 87
                68999****************987665 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 3.4
   IstB_IS21   4 letrlrlaklpaqktledidfraarsldkrkvk.eLatlsfiekken 49 
                  e+  r++ +++q  ++ ++f++ ++ld ++++ +  +  + +++en
  KHJ33099.1 108 TENLSRNSLFNPQTAIKLVKFDSDNGLDSQIIRgAYLSARYETRREN 154
                 567789999999999*************9999866677777666666 PP

  == domain 3  score: 1.6 bits;  conditional E-value: 0.36
   IstB_IS21  90 lkrarrdgklaralkrllkv.dllilDd..lgllpldq.aeaellfeviekryerrsiiitsnlpfaew 154
                 l++ +++ + ar++k+llk  d+l+lD+   gl p+   + +++l+ ++++  +r  i +  + ++ +w
  KHJ33099.1 203 LNLSNGQKRRARIAKALLKNpDILLLDEpfAGLDPITLlDLKSMLYTLVKAHNQRLLISLRPQDQLPQW 271
                 566778888899999888766******976699999862567788999998888877777777776666 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.12
   IstB_IS21  36 keLatlsf.iekkenivllGpsGvGKshl 63 
                  +  +l + +++ e   ++Gp G GK+ l
  KHJ33099.1 395 VSHNGLWWtVRRGERWGIFGPNGSGKTTL 423
                 44455666457789999**********87 PP

  == domain 5  score: -2.8 bits;  conditional E-value: 8.3
   IstB_IS21  98 klaralkrllkv.dllilDdl 117
                 k+a  l++++k  d++ilD+ 
  KHJ33099.1 552 KIAMFLRAIIKEpDIIILDEA 572
                 566667776664499***995 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.023        13       3      21 ..      72      90 ..      71     156 .. 0.81
   2 ?    6.5   0.0     0.021        12       3      18 ..     412     427 ..     411     474 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.023
      AAA_18  3 ltGtpGvGKttlakeLskr 21
                + G++ +GKttl + L+ +
  KHJ33099.1 72 IVGPSSSGKTTLLEVLNGE 90
                89************99655 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.021
      AAA_18   3 ltGtpGvGKttlakeL 18 
                 + G+ G+GKttl   +
  KHJ33099.1 412 IFGPNGSGKTTLLSLI 427
                 89**********8876 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0071         4       3      19 ..      71      87 ..      70      91 .. 0.89
   2 ?    4.4   0.0     0.058        33       3      19 ..     411     427 ..     410     433 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0071
        MobB  3 givgksgsGKTtLlekl 19
                +ivg s sGKTtLle l
  KHJ33099.1 71 AIVGPSSSGKTTLLEVL 87
                69************976 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.058
        MobB   3 givgksgsGKTtLlekl 19 
                 gi g +gsGKTtLl+ +
  KHJ33099.1 411 GIFGPNGSGKTTLLSLI 427
                 68899********9755 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0    0.0073       4.1     100     122 ..      68      90 ..      52     117 .. 0.84
   2 ?    4.4   0.0     0.057        32     104     123 ..     412     431 ..     402     441 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0073
                  SEEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 100 ktsvlvGqSGvGKStLinallpe 122
                  +  ++vG+S  GK+tL+++l++e
   KHJ33099.1  68 EHWAIVGPSSSGKTTLLEVLNGE 90 
                  56789***************998 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.057
                  EECSTTSSHHHHHHHHCTT- CS
  RsgA_GTPase 104 lvGqSGvGKStLinallpel 123
                  + G+ G GK+tL+  +++++
   KHJ33099.1 412 IFGPNGSGKTTLLSLITSDH 431
                  78***********9999875 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.32   1.8e+02       4      19 ..      71      86 ..      68      91 .. 0.87
   2 ?    8.5   0.0    0.0032       1.8       5      23 ..     412     430 ..     410     487 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.32
                EEEC-TTTCHHHHHHH CS
       NACHT  4 ilqGeaGsGKTtLlqk 19
                ++ G++ sGKTtLl+ 
  KHJ33099.1 71 AIVGPSSSGKTTLLEV 86
                6899*********975 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0032
                 EEC-TTTCHHHHHHHHHHH CS
       NACHT   5 lqGeaGsGKTtLlqklala 23 
                 + G++GsGKTtLl  + ++
  KHJ33099.1 412 IFGPNGSGKTTLLSLITSD 430
                 569**********988765 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.24   1.4e+02      24      41 ..      71      88 ..      59      95 .. 0.81
   2 ?    8.6   0.0    0.0017      0.93      24      46 ..     411     433 ..     406     436 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.24
                EEEESTTSSHHHHHHHHC CS
      NB-ARC 24 alvGmgGvGKttlakqil 41
                a+vG   +GKttl++  +
  KHJ33099.1 71 AIVGPSSSGKTTLLEVLN 88
                89***********97655 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0017
                 EEEESTTSSHHHHHHHHCCSHCC CS
      NB-ARC  24 alvGmgGvGKttlakqilnksde 46 
                 ++ G  G+GKttl++ i +++ +
  KHJ33099.1 411 GIFGPNGSGKTTLLSLITSDHPQ 433
                 699****************9877 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0    0.0038       2.1       6      26 ..      72      92 ..      68      98 .. 0.90
   2 ?    2.1   0.0      0.26   1.5e+02       6      21 ..     412     427 ..     409     435 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0038
   PduV-EutP  6 liGkvgsGKttLtqalkgeel 26
                ++G++ sGKttL + l+ge++
  KHJ33099.1 72 IVGPSSSGKTTLLEVLNGEHI 92
                79****************987 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.26
   PduV-EutP   6 liGkvgsGKttLtqal 21 
                 ++G+ gsGKttL   +
  KHJ33099.1 412 IFGPNGSGKTTLLSLI 427
                 5799********8765 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.019        10     134     149 ..      72      87 ..      61      91 .. 0.85
   2 ?    4.3   0.0     0.032        18     135     150 ..     413     428 ..     404     435 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.019
       T2SSE 134 vsGgTgsGKttllyal 149
                 + G+ +sGKttll +l
  KHJ33099.1  72 IVGPSSSGKTTLLEVL 87 
                 67**********9875 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.032
       T2SSE 135 sGgTgsGKttllyall 150
                  G+ gsGKttll  + 
  KHJ33099.1 413 FGPNGSGKTTLLSLIT 428
                 59*********98765 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0    0.0075       4.2      26      54 ..      60      86 ..      42     100 .. 0.77
   2 ?    2.2   0.0      0.18     1e+02      38      62 ..     410     434 ..     401     440 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0075
        TniB 26 LleypkrkrmpnlllvGdsnnGKtmivek 54
                L ++p+r+  ++  +vG+s  GKt+++e 
  KHJ33099.1 60 LKSFPDRE--EHWAIVGPSSSGKTTLLEV 86
                55555555..599*************986 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.18
        TniB  38 lllvGdsnnGKtmivekFarlhppe 62 
                   ++G+   GKt++++  +++hp++
  KHJ33099.1 410 WGIFGPNGSGKTTLLSLITSDHPQT 434
                 5699************999999987 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.52   2.9e+02       3      17 ..      71      85 ..      69      90 .. 0.85
   2 ?    4.7   0.0     0.045        25       4      20 ..     412     428 ..     409     433 .. 0.86
   3 ?    1.5   0.0      0.45   2.5e+02      82     103 ..     550     571 ..     543     572 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.52
                EEE--TTSSHHHHHH CS
    NTPase_1  3 fiTGppGvGKtTlvk 17
                +i Gp+ +GKtTl++
  KHJ33099.1 71 AIVGPSSSGKTTLLE 85
                789**********97 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.045
                 EE--TTSSHHHHHHHHH CS
    NTPase_1   4 iTGppGvGKtTlvkkvl 20 
                 i Gp G+GKtTl++ ++
  KHJ33099.1 412 IFGPNGSGKTTLLSLIT 428
                 679*********99876 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.45
                 HHHHHHHHHHHHHHH-EEEE-- CS
    NTPase_1  82 eelalealrkalseadviviDE 103
                 ++ ++  lr  ++e+d+i++DE
  KHJ33099.1 550 SQKIAMFLRAIIKEPDIIILDE 571
                 556677788888*********9 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0     0.017       9.5      27      44 ..      71      88 ..      59     156 .. 0.91
   2 ?   -3.1   0.0       8.7   4.9e+03     322     357 ..     221     256 ..     166     261 .. 0.73
   3 ?   -2.3   0.2       4.9   2.7e+03     145     174 ..     297     326 ..     273     351 .. 0.63
   4 ?    5.5   0.4     0.022        12      29      43 ..     413     427 ..     411     429 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.017
      AAA_15 27 vliGkNnsGKSsileald 44
                 ++G+ +sGK+++le+l+
  KHJ33099.1 71 AIVGPSSSGKTTLLEVLN 88
                79*************994 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 8.7
      AAA_15 322 eknvilliEEPEahLHpqaqkvlikllkelandnkt 357
                 ++++ill++EP a L p     l   l+ l++ +++
  KHJ33099.1 221 KNPDILLLDEPFAGLDPITLLDLKSMLYTLVKAHNQ 256
                 467889999998888777777777777777777764 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 4.9
      AAA_15 145 kelpkekeeklekekeelkid.kedlkklik 174
                 k+  k ++  ++ +++e+ ++  ++++k+++
  KHJ33099.1 297 KQ-IKHRNQREDVKSTEIGVNeENSKNKVWN 326
                 22.2344555555566666664444445555 PP

  == domain 4  score: 5.5 bits;  conditional E-value: 0.022
      AAA_15  29 iGkNnsGKSsileal 43 
                  G+N+sGK+++l ++
  KHJ33099.1 413 FGPNGSGKTTLLSLI 427
                 59**********998 PP

>> DUF3584  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.26   1.4e+02      17      36 ..      67      86 ..      65      87 .. 0.87
   2 ?    7.0   0.1    0.0016      0.88      21      37 ..     411     427 ..     403     428 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.26
     DUF3584 17 dghtnieGtNaaGKTtLlrL 36
                ++h  i+G   +GKTtLl +
  KHJ33099.1 67 EEHWAIVGPSSSGKTTLLEV 86
                68999************975 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0016
     DUF3584  21 nieGtNaaGKTtLlrLi 37 
                  i G N++GKTtLl+Li
  KHJ33099.1 411 GIFGPNGSGKTTLLSLI 427
                 689*************8 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0    0.0047       2.6      33      59 ..      58      87 ..      43      93 .. 0.85
   2 ?    1.2   0.0      0.35   1.9e+02      44      60 ..     412     427 ..     406     437 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0047
                  EEGGGS-....SEEEE--TTSSHHHHHHHH CS
  FtsK_SpoIIIE 33 ldlkkma...shllvaGatgsGKStalntL 59
                  ++lk+ +    h  ++G + sGK+t l +L
    KHJ33099.1 58 FELKSFPdreEHWAIVGPSSSGKTTLLEVL 87
                  55666667778***************9987 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.35
                   EE--TTSSHHHHHHHHH CS
  FtsK_SpoIIIE  44 vaGatgsGKStalntLi 60 
                   + G  gsGK+t l +Li
    KHJ33099.1 412 IFGPNGSGKTTLL-SLI 427
                   7899******976.344 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.092        52       1      16 [.      72      87 ..      72      92 .. 0.88
   2 ?    5.7   0.0      0.02        11       1      17 [.     412     428 ..     412     437 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.092
  ATP_bind_1  1 vvGpaGsGKttfvgal 16
                +vGp +sGKtt+ + l
  KHJ33099.1 72 IVGPSSSGKTTLLEVL 87
                79*********98766 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.02
  ATP_bind_1   1 vvGpaGsGKttfvgals 17 
                 + Gp GsGKtt+ + ++
  KHJ33099.1 412 IFGPNGSGKTTLLSLIT 428
                 68**********98775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (679 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        32  (0.00178482); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              32  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.41
# Mc/sec: 5003.01
//
Query:       KHJ33100.1  [L=113]
Description: putative 60s ribosomal protein l34 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.8e-44  148.9   4.4      5e-44  148.5   4.4    1.2  1  Ribosomal_L34e  Ribosomal protein L34e
  ------ inclusion threshold ------
      0.044   13.8   0.2      0.067   13.2   0.2    1.3  1  DZR             Double zinc ribbon


Domain annotation for each model (and alignments):
>> Ribosomal_L34e  Ribosomal protein L34e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.5   4.4   5.6e-48     5e-44       3      94 .]       4      95 ..       1      95 [. 0.98

  Alignments for each domain:
  == domain 1  score: 148.5 bits;  conditional E-value: 5.6e-48
  Ribosomal_L34e  3 qrltyrrrlsYntrsnkvrvvktpggklvyqykkkkgkapkCgdckkkLqGipalrpkelsrlsktkktvsRaYGgslcakcvkerivrafl 94
                    +rltyrrr+ Yntrsnkvrvvktpgg+l+y+++kk g++pkCgdc++kL+Gipalrp+++s++s+ kktv+RaYGgs+ca+cv++rivrafl
      KHJ33100.1  4 NRLTYRRRNPYNTRSNKVRVVKTPGGSLRYLHIKKAGTVPKCGDCGTKLSGIPALRPRKYSQISRPKKTVQRAYGGSRCASCVRDRIVRAFL 95
                    8******************************************************************************************8 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.2   7.5e-06     0.067      15      36 ..      45      87 ..      39      93 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 7.5e-06
         DZR 15 CseCgtklkavaa.....................edrCpsCge 36
                C++Cgtkl+  +a                       rC sC +
  KHJ33100.1 45 CGDCGTKLSGIPAlrprkysqisrpkktvqraygGSRCASCVR 87
                **********999****************************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       580  (0.0323498); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.19s 00:00:00.55 Elapsed: 00:00:00.35
# Mc/sec: 964.37
//
Query:       KHJ33101.1  [L=2554]
Description: putative pre-mrna processing splicing factor 8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   3.1e-231  767.2  14.4   4.3e-231  766.7  10.4    2.2  2  PROCN           PROCN (NUC071) domain
   1.8e-126  420.4   1.5   3.9e-126  419.3   1.5    1.6  1  PRP8_domainIV   PRP8 domain IV core
    4.6e-85  283.4   1.7    8.1e-58  194.9   0.4    3.1  2  U6-snRNA_bdg    U6-snRNA interacting domain of PrP8
    3.6e-80  267.2   2.3    3.6e-80  267.2   2.3    2.0  2  PRO8NT          PRO8NT (NUC069), PrP8 N-terminal domain
    1.9e-70  235.1   0.1    4.8e-70  233.8   0.1    1.8  1  U5_2-snRNA_bdg  U5-snRNA binding site 2 of PrP8
    8.3e-47  157.5   0.3    2.2e-46  156.1   0.3    1.8  1  RRM_4           RNA recognition motif of the spliceosomal PrP
    8.9e-46  154.8   0.0    2.7e-45  153.3   0.0    1.9  1  PROCT           PROCT (NUC072) domain
    6.1e-10   39.4   0.0    6.1e-10   39.4   0.0    2.0  2  Hom_end_hint    Hom_end-associated Hint


Domain annotation for each model (and alignments):
>> PROCN  PROCN (NUC071) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  766.7  10.4  1.9e-234  4.3e-231       2     407 .]     428     833 ..     427     833 .. 1.00
   2 ?    1.9   0.1     0.033        74     241     308 ..    1126    1198 ..    1120    1208 .. 0.79

  Alignments for each domain:
  == domain 1  score: 766.7 bits;  conditional E-value: 1.9e-234
       PROCN   2 ektkdalsllfapaPfnlrsgktkraedvplikkwykeraekeePvkvrvsyqkllkkyvlnelkkkkkkkkkkkkllkelketkffqktkldwveaGl 100
                 ++t++a++l++ap Pf +rsg++ ra+dvpl+k+wy e++++ +Pvkvrvs+qkllk++vlnel+kkk k+++k++l ++lk+tkffq+t++dwveaGl
  KHJ33101.1 428 NDTTSAIALWWAPFPFDRRSGNMVRAQDVPLVKQWYLEHCPQGQPVKVRVSHQKLLKTFVLNELHKKKPKAQNKQSLTRSLKQTKFFQQTTIDWVEAGL 526
                 57899********************************************************************************************** PP

       PROCN 101 qvvrqgfnmlnllihrksltylhldynfnlkPtktlttkerkksrlGnafhlirellrlvkllvdahvqyrlgkidayqladglqyifnhvgqltGiyr 199
                 qv+rqgfnmlnllihrk+ltylhldynfnlkP+ktlttkerkksr+Gnafhl+re+l+l+kl+vda+vqyrlg+ida+qladg+ yifnhvgqltG+yr
  KHJ33101.1 527 QVCRQGFNMLNLLIHRKNLTYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLMREILKLTKLIVDAQVQYRLGNIDAFQLADGILYIFNHVGQLTGMYR 625
                 *************************************************************************************************** PP

       PROCN 200 ykykvmrqirackdlkhviysrfntgevgkGPGvGfwaPswrvwvfflrGiiPllerwlgnllarqfeGrkskevaktitkqrveseydlelraavlhd 298
                 ykyk+m+qir ckdlkh+i++rfn+g vgkG G+GfwaP+wrvw+ff+rGiiPllerwlgnll+rqfeGr+sk vakt+tkqrves++dlelra+v+ d
  KHJ33101.1 626 YKYKLMHQIRSCKDLKHLIHYRFNSGPVGKGHGCGFWAPAWRVWLFFMRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMAD 724
                 *************************************************************************************************** PP

       PROCN 299 ildmlPegvkqskaktilqhlseafrcwkanipwkvPglpepienlilryvkakadewisvahynrerikrgatvdktvvkknlGrltrlylkeeqerq 397
                 ++dm+Pegvkq+k++t+lqhlsea+rcwk+nipwkvPglp+p+en+ilryvk+kad+wisvahynreri+rgatvdktv+kknlGrltrl+lk+eqerq
  KHJ33101.1 725 LMDMMPEGVKQNKVNTVLQHLSEAWRCWKSNIPWKVPGLPAPVENIILRYVKSKADWWISVAHYNRERIRRGATVDKTVAKKNLGRLTRLWLKAEQERQ 823
                 *************************************************************************************************** PP

       PROCN 398 aeylkdgpyi 407
                 ++y+kdgpy+
  KHJ33101.1 824 HNYMKDGPYV 833
                 ********97 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.033
       PROCN  241 rvwvff...lrGiiPllerwlgnllarqfe...GrkskevaktitkqrveseydlelraavlhdildmlPegvk 308 
                  r+wvff         l++r+l++  + +fe   G ++k+   + ++ r   ++d++l  av  d+++ lP  + 
  KHJ33101.1 1126 RIWVFFrftAEESCDLIQRFLTEQPDPNFEnviGYRNKKCWPRDSRMRL-MRHDVNLGRAVFWDLKNRLPRSIT 1198
                  899999322345789************9993334466666666677776.467*****************9886 PP

>> PRP8_domainIV  PRP8 domain IV core
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  419.3   1.5  1.7e-129  3.9e-126       3     230 .]    1980    2207 ..    1978    2207 .. 0.99

  Alignments for each domain:
  == domain 1  score: 419.3 bits;  conditional E-value: 1.7e-129
  PRP8_domainIV    3 llnsqnyaelfsneiklfvddtnvyrvtvhktfeGnlttkpvnGavfilnPktGqlflkvihtsvwagqkrlsqlakwkaaeevaalvrslPve 96  
                     +lnsqny+elfsn+i++f+ddtnvyrvt+hktfeGnlttkp+nGa+fi+nP+tGqlflkv+ht vwagqkrl+qlakwk+aeevaal+rslPve
     KHJ33101.1 1980 FLNSQNYSELFSNQIQFFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVVHTIVWAGQKRLGQLAKWKTAEEVAALIRSLPVE 2073
                     8********************************************************************************************* PP

  PRP8_domainIV   97 eqPkqiivtrkglldplevhlldfPnivikgselkLPfkavlkiekladlvlkatepkmvlfnlyddWlesissytafsrlililralkinkek 190 
                     eqPkq+ivtrkglldplevhlldfPni+i++sel+LPf+a++k+ekl+d++l+atep+m+lfnlyd+Wl+sissytafsrlililral++n++k
     KHJ33101.1 2074 EQPKQLIVTRKGLLDPLEVHLLDFPNISIRASELQLPFQAAMKVEKLGDMILRATEPQMMLFNLYDEWLKSISSYTAFSRLILILRALHVNQDK 2167
                     ********************************************************************************************** PP

  PRP8_domainIV  191 akkilkpdkevvvkehhlwptlsdeeWvevevklrdlila 230 
                     +k +l+pdk+v+++ehh+wp++sde+W++ve++lrdlil+
     KHJ33101.1 2168 TKLLLRPDKTVITQEHHIWPSFSDEDWIKVETQLRDLILN 2207
                     **************************************96 PP

>> U6-snRNA_bdg  U6-snRNA interacting domain of PrP8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.2   0.0     1e-27   2.3e-24       1      66 [.    1474    1539 ..    1474    1549 .. 0.96
   2 !  194.9   0.4   3.6e-61   8.1e-58      41     159 .]    1687    1818 ..    1665    1818 .. 0.91

  Alignments for each domain:
  == domain 1  score: 86.2 bits;  conditional E-value: 1e-27
  U6-snRNA_bdg    1 fkkyqllksekfawtsarhdgkllnleryradviealGgveailehtlfkatsfksweglvwdkas 66  
                    fk yql+ks++f+wts+rhdgkl+nl++yr+dvi+alGgve+ilehtlfkat f+swegl+w+ka 
    KHJ33101.1 1474 FKTYQLMKSNPFWWTSQRHDGKLWNLNAYRTDVIQALGGVETILEHTLFKATAFPSWEGLFWEKAC 1539
                    799************************************************************975 PP

  == domain 2  score: 194.9 bits;  conditional E-value: 3.6e-61
  U6-snRNA_bdg   41 eailehtlfkatsfksweglvwdk.............asgfeeslkakkltnaqrsGlsqiPnrrftlWWsPtinranvyvGfqvqldltGvfmh 122 
                    + i  + ++  ++ ++w g+ +d+             +sgfees+k kkltnaqrsGl+qiPnrrftlWWsPtinranvyvGfqvqldltG+f+h
    KHJ33101.1 1687 QRISIRDIYLESQEREWAGFRVDHdqlylrhdflvlhNSGFEESMKFKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLH 1781
                    55555666777777888888888888888888888889********************************************************* PP

  U6-snRNA_bdg  123 gklptlkisliqifrahlWqkihesvvmdllqvldde 159 
                    gk+ptlkisliqifrahlWqkihesvvmdl+qv+d+e
    KHJ33101.1 1782 GKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQE 1818
                    ***********************************96 PP

>> PRO8NT  PRO8NT (NUC069), PrP8 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  267.2   2.3   1.6e-83   3.6e-80       1     152 []      78     229 ..      78     229 .. 0.99
   2 ?   -4.0   0.1       5.6   1.3e+04      43      67 ..     723     747 ..     720     750 .. 0.83

  Alignments for each domain:
  == domain 1  score: 267.2 bits;  conditional E-value: 1.6e-83
                 -----HHHHHHHHHHHTTT-SGGGTTTHHHHHHHHTTSHHHHHHHHTT---TT-S--B--EEEETTT--EEE-----B-HHHHHHHHHHHHHHHHHHHH CS
      PRO8NT   1 keelPpehlRkiikdhgdlsskkfksdkrvylgalkylPhavlkllenmpmpweevrevkvlyhvtgaitfvneiprviepvylaqwstmwiamrrekr 99 
                 k+++PpehlRki+kd gd+s+kkf+sdkr+ylgalky+Phav+kllenmpmpwe++revkvlyh++g++t+vne+prviep+++aqw+tmw+ mrrek 
  KHJ33101.1  78 KADMPPEHLRKIVKDIGDVSQKKFSSDKRSYLGALKYMPHAVMKLLENMPMPWESTREVKVLYHINGCLTLVNETPRVIEPIFHAQWATMWVCMRREKS 176
                 789************************************************************************************************ PP

                 TTS------SS-S-SSS----H.HHHHHH-----------TTTSTTTTTTTT- CS
      PRO8NT 100 drrhfkrlrfppfddeeppldyadnildvepleaiqleldeeedeavvdwlyd 152
                 drrhfkr+r+ppfddeeppl++++ni+dv+ple+i++elde+ed+av dw+y+
  KHJ33101.1 177 DRRHFKRMRIPPFDDEEPPLSWSENIEDVDPLEPIHMELDETEDAAVFDWFYE 229
                 ****************************************************7 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 5.6
                 HHHHTT---TT-S--B--EEEETTT CS
      PRO8NT  43 lkllenmpmpweevrevkvlyhvtg 67 
                   l++ mp   ++ +  +vl h + 
  KHJ33101.1 723 ADLMDMMPEGVKQNKVNTVLQHLSE 747
                 5799999999999999999999875 PP

>> U5_2-snRNA_bdg  U5-snRNA binding site 2 of PrP8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.8   0.1   2.2e-73   4.8e-70       1     134 []    1242    1375 ..    1242    1375 .. 0.99

  Alignments for each domain:
  == domain 1  score: 233.8 bits;  conditional E-value: 2.2e-73
  U5_2-snRNA_bdg    1 kegvwdlvnestkertakaflkvseeeiekfenrirqillssgsttftkiaakwntalialltyfreavvsteelldvlvkaetkiqtrvklg 93  
                      k++vw+lv++++kerta+afl+v+ee+i+kf+nrirqil+ssgsttftkia+kwnt+lial+ty+rea+vst +lld++vk+etkiqtrvk+g
      KHJ33101.1 1242 KDSVWSLVDNTSKERTAHAFLQVTEEDIAKFNNRIRQILMSSGSTTFTKIANKWNTSLIALFTYYREAAVSTVNLLDTIVKCETKIQTRVKIG 1334
                      689****************************************************************************************** PP

  U5_2-snRNA_bdg   94 lnskmpsrfPpavfytPkelGGlGmlsaghvliPasdlkys 134 
                      lnskmpsrfPpavfytPkelGGlGm+s +h+liP+sd ++s
      KHJ33101.1 1335 LNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPTSDKRWS 1375
                      ****************************************8 PP

>> RRM_4  RNA recognition motif of the spliceosomal PrP8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.1   0.3   9.9e-50   2.2e-46       1      91 [.    1018    1108 ..    1018    1109 .. 0.99

  Alignments for each domain:
  == domain 1  score: 156.1 bits;  conditional E-value: 9.9e-50
       RRM_4    1 ekidltllnrllrlivdknladyitaknnvvltykdmshvnsyGlirGlqfssfvvqyyglvldllllGleraselaGpaekpneflqfkd 91  
                  ekidltllnrllrli+d+nladyi++knnv+ltykdm+h+nsyG+irGlqfs+fv+qyyglvldllllGl+rase+aGp+ +pn+flqf+d
  KHJ33101.1 1018 EKIDLTLLNRLLRLILDHNLADYISSKNNVQLTYKDMNHINSYGMIRGLQFSAFVFQYYGLVLDLLLLGLKRASEIAGPPASPNDFLQFRD 1108
                  89***************************************************************************************87 PP

>> PROCT  PROCT (NUC072) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.3   0.0   1.2e-48   2.7e-45       1     121 [.    2431    2550 ..    2431    2552 .. 0.94

  Alignments for each domain:
  == domain 1  score: 153.3 bits;  conditional E-value: 1.2e-48
       PROCT    1 ivltvsftpgsvslsayklteeGyewgkknkdlasenpegfepsfsekvqllLsdrilGfflvPeegvWnysfmgakfs..ekmkyelkldiPkeFy 95  
                  +++tvsftpgsvsl++++lt++Gy+wg +nkdl s++p+gf++s+ ek+qllLsdri+G+flvP++++Wnysf+g++fs  ek+ +++k+d+P +Fy
  KHJ33101.1 2431 VTMTVSFTPGSVSLASWALTPAGYKWGVENKDLGSDQPQGFSTSMGEKCQLLLSDRIRGYFLVPNNNIWNYSFIGSSFSsvEKKPIHVKIDTPIPFY 2527
                  79****************************************************************************9888999************ PP

       PROCT   96 delHRpthFlqfaeleeeeeleadqe 121 
                  ++ HRp hF++fae+e+   +  d++
  KHJ33101.1 2528 SAEHRPLHFQSFAEIED---TYFDRD 2550
                  ***************44...444444 PP

>> Hom_end_hint  Hom_end-associated Hint
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.4   0.0   2.7e-13   6.1e-10       1     114 [.    1539    1643 ..    1539    1694 .. 0.85
   2 ?   -3.3   1.6       3.1   6.9e+03      80     151 ..    2242    2290 ..    2238    2321 .. 0.56

  Alignments for each domain:
  == domain 1  score: 39.4 bits;  conditional E-value: 2.7e-13
                    CEETT-EEEBTTS-EEEGGG--TT-EEEBTTSSEEEEEE--EEEEEEEEEEE-SSSBHHSSST-SEEEEETT-EEEEEEE-EEEEEEEEESTEEE CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hom_end_hint    1 cFakgTevlmadGsdksiedievgekvmGkdGkpreVvalprgvetmYevkektkhraeeeesllsfvcnanHkLvlrtpqkiklterklrgkky 95  
                    c+akgT +l  dG+  ++e+++ g+ +mG dG +r+  +++ g++++Y++k+ +         l ++v++ nH Lvl+ ++ ++ t++ +  + y
    KHJ33101.1 1539 CLAKGTLLLRPDGTTVTVEEVKEGDLLMGPDGGSRRAFNIVSGRDKLYRIKMGN--------DLEDLVVTPNHILVLHRQRPLEHTSQPK--HGY 1623
                    9*************************************************9887........36789**************999999874..567 PP

                    EEEEEEEEEEEE-TT.S-EE CS
                    xxxxxxxxxxxxxxx.xxxx RF
  Hom_end_hint   96 tsVtyfalekekted.grvi 114 
                     +V+ +++ +++t++  +++
    KHJ33101.1 1624 LQVAEKNIIDSQTSNeIENV 1643
                    99999999988888722334 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 3.1
                    E-EEEEEEEEESTEEEEEEEEEEEEEEE-TTS-EEEEEEEEEEEEE.GGGTTHHHHHHHHHHHTS-SSSEEE CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hom_end_hint   80 pqkiklterklrgkkytsVtyfalekektedgrvieivkevtksfehesegkekaaekakeFastidkeeie 151 
                    +q  ++++++l++++ t Vt +++++ + ed     i+ ++t +fe+++ ++++                 e
    KHJ33101.1 2242 QQAAEIEKQQLEQQQLTAVT-TRTQNVHGED-----IIVTTTSQFEQQTFASKT-----------------E 2290
                    56666777777777777773.3333333333.....344444444444333333.................2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       819  (0.0456802); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.28u 0.28s 00:00:01.56 Elapsed: 00:00:00.48
# Mc/sec: 16053.65
//
Query:       KHJ33102.1  [L=320]
Description: putative myb dna-binding domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.3e-11   42.8   0.5    0.00013   22.1   0.6    2.3  2  Myb_DNA-binding  Myb-like DNA-binding domain
    4.4e-11   42.8   0.2    1.5e-08   34.8   0.0    2.4  2  Myb_DNA-bind_6   Myb-like DNA-binding domain
  ------ inclusion threshold ------
       0.12   12.6   0.2        9.8    6.4   0.1    2.3  2  Parvo_coat_N     Parvovirus coat protein VP1


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   2.7e-07    0.0016       2      43 ..     226     267 ..     225     270 .. 0.86
   2 !   22.1   0.6   2.1e-08   0.00013       2      41 ..     275     316 ..     274     320 .] 0.94

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 2.7e-07
                      SSSBHHHHHHHHHHHHHHTTC..HHHHHHHHTSS-HHHHHHHHH CS
  Myb_DNA-binding   2 gkWteeEdelLleavkkhGnr..WkkIaerlggRtekqcrsrwr 43 
                       k+t+e+d lL+++ ++  ++  Wk Ia+ ++gR+    + r+ 
       KHJ33102.1 226 LKFTPEDDALLVDLKEN--KSltWKQIADFFPGRSSGTLQVRYC 267
                      69************999..5566************988888876 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 2.1e-08
                      SSSBHHHHHHHHHHHHHHT.TCHHHHHHHHT.SS-HHHHHHH CS
  Myb_DNA-binding   2 gkWteeEdelLleavkkhG.nrWkkIaerlg.gRtekqcrsr 41 
                       +Wtee  ++L  a++ +  ++W+ Ia+++g g t  +c+++
       KHJ33102.1 275 TQWTEETIQKLRTALHDYEqEKWRIIAQKVGtGFTSTACKEK 316
                      58*****************************99******998 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   0.0   2.5e-12   1.5e-08       1      60 []     228     285 ..     228     285 .. 0.94
   2 !   11.6   0.2   4.4e-05      0.26       1      38 [.     277     316 ..     277     319 .. 0.91

  Alignments for each domain:
  == domain 1  score: 34.8 bits;  conditional E-value: 2.5e-12
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwknkLrpkisrkkwskeedirL 60 
                     +t+e+d +L++l e+ +  Wk+Ia+ ++ R++ +++ r+++kL++  ++++w++e +++L
      KHJ33102.1 228 FTPEDDALLVDLKENKSLTWKQIADFFPGRSSGTLQVRYCTKLKA--KTTQWTEETIQKL 285
                     79*************************55************9976..99*****999987 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 4.4e-05
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygn.dWknIaealn.rRtpkqcfdr 38 
                     Wtee  ++L+    +y++ +W+ Ia+  +   t+++c+++
      KHJ33102.1 277 WTEETIQKLRTALHDYEQeKWRIIAQKVGtGFTSTACKEK 316
                     ****************9879******99667999999886 PP

>> Parvo_coat_N  Parvovirus coat protein VP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1    0.0016       9.8      37      51 ..       8      22 ..       2      31 .. 0.75
   2 ?    3.8   0.0      0.01        63      43      63 ..     224     244 ..     220     245 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0016
  Parvo_coat_N 37 lksGknPYlkfnaaD 51
                   ++G+nPY+ ++ + 
    KHJ33102.1  8 HEQGHNPYIDYSSHT 22
                  679********9764 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.01
  Parvo_coat_N  43 PYlkfnaaDqelldelKddts 63 
                   P lkf+  D+ ll +lK+++s
    KHJ33102.1 224 PKLKFTPEDDALLVDLKENKS 244
                   89****************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1028  (0.0573373); expected 358.6 (0.02)
Passed bias filter:                      614  (0.0342462); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2255.58
//
Query:       KHJ33103.1  [L=646]
Description: putative potassium ion channel yvc1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.5e-08   33.4  24.1    7.5e-08   31.9  24.1    1.7  1  Ion_trans    Ion transport protein
    2.9e-05   22.9  17.8    0.00064   18.5  17.8    2.2  1  PKD_channel  Polycystin cation channel


Domain annotation for each model (and alignments):
>> Ion_trans  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9  24.1   8.4e-12   7.5e-08      24     243 ..     284     493 ..     264     494 .. 0.76

  Alignments for each domain:
  == domain 1  score: 31.9 bits;  conditional E-value: 8.4e-12
                 SSSSHHHHC...HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHCHSHHHHHHHHHHHHHHHHH.......HHHH...............HHHHHHHH CS
   Ion_trans  24 yfpedelek...tileilelvftaiftlemllkilalgllikkrYlrdpwnilDflvvlpsllsl.......vlse...............esllllsv 97 
                  +          +i+ei+  +ft  f+ + l ki+  g+     Y++  wn++ ++  ++   sl                           ++l++s+
  KHJ33103.1 284 VNR-----SgdlDIVEIILHIFTFGFLSDELSKIWKVGY----WYIGF-WNVFNLFLYTLLTTSLtlrlialG--HpvgkdhlrekfnelsYNFLAFSA 370
                 222.....23459**************************....99998.9*************9966655550..055555667777888899****** PP

                 HHHH.GGGGGGHHHCHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCSCCSTSSSTTTSSSSSSHHHHHHHHHHHHTTSSH CS
   Ion_trans  98 lrlf.rvlrllklisrleglrtlvtalirsvkdllnvlllllvvlfifaligvqlfkgklreknecaktwenpnngntnFdnfftallwlfrlmttegw 195
                 + ++ r+l  l  i+ ++++ ++++ +++s   ++  ll +++v+f+ a ig+                           d+  ++ ++++r+mt    
  KHJ33103.1 371 PMFWmRLLLYLDSIRFFGTMLIVLK-VMMSESLIFFALLTVIIVGFLQAFIGLDAA------------------------DSHTDSTYFILRTMTNA-- 442
                 *******************999888.666666666666666778888888885544........................66788999999999966.. PP

                 HHHHHHHHHHS.....HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Ion_trans 196 gdilyatldek.....skvaliyfvifiilgsflllNlliaviadnfqelter 243
                   ++  ++ +      + ++ i++ if +l++ +llN+lia+ ++++q++t++
  KHJ33103.1 443 --VMLSPEFSGfdnfaPPFGAILYYIFTFLITTVLLNILIALFNSAYQDITDN 493
                 ..33333333335667999999***************************9975 PP

>> PKD_channel  Polycystin cation channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5  17.8   7.2e-08   0.00064     212     425 ..     291     489 ..     280     490 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 7.2e-08
                  HHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHH-SSS----HHHHHHHHHHHHHHHHHHH CS
  PKD_channel 212 llievvfvvfvlyfvveeilkirkerasylrsvwnlldlaivvlsvvlivlail...revlakkllkkveaekeefldFrevaqldqllriilavlvf 306
                   ++e+++ +f + f  +e+ ki+k +  y+  +wn+ +l+++ l + ++ l+++   + v  ++l +k+ + + +fl F ++ ++  ll ++      
   KHJ33103.1 291 DIVEIILHIFTFGFLSDELSKIWKVGYWYI-GFWNVFNLFLYTLLTTSLTLRLIalgHPVGKDHLREKFNELSYNFLAFSAPMFWMRLLLYL------ 381
                  5679*********************98887.5899999988887776666555411156666777777778888888888888887665544...... PP

                  HHHHGGGGG------------------------HHH.HHHHHHHHHHHHHHHSSSS-STTSSHHHHHHHHHHHHTT---HHHHHHH-TTHHHHHHHHH CS
  PKD_channel 307 lttlkllkvlrfnktlslltktlaralkdvlgfalv.ivilflayaqlgvllfGtqasnfsnlvksiltlfrlilgdfqytelesgnrvLGpllllal 403
                           +rf+ t+  + k++++  + ++ fal+ ++i+ +  a++g+    ++++  + + +++ +    ++ + +++ +++    +G +l+ ++
   KHJ33103.1 382 -------DSIRFFGTMLIVLKVMMS--ESLIFFALLtVIIVGFLQAFIGLDAADSHTDSTYFILRTMTNA---VMLSPEFSGFDNFAPPFGAILYYIF 467
                  .......445677777766666543..4455555540556677778888888888888888888888888...7777888899999************ PP

                  HHHHHHHHHHHHHHHHHT-XXX CS
  PKD_channel 404 vflvifillnlflaiindsyee 425
                   fl+  +lln+++a+ n++y+ 
   KHJ33103.1 468 TFLITTVLLNILIALFNSAYQD 489
                  ********************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (646 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       947  (0.0528195); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 4510.55
//
Query:       KHJ33104.1  [L=1310]
Description: putative cation-transporting atpase 4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-19   70.4   0.0    2.9e-19   69.3   0.0    1.6  1  E1-E2_ATPase   E1-E2 ATPase
    1.6e-13   51.4   0.1    1.8e-06   28.4   0.1    3.3  2  Hydrolase      haloacid dehalogenase-like hydrolase
     0.0052   16.8   0.0      0.031   14.4   0.0    2.2  2  Cation_ATPase  Cation transport ATPase (P-type)
  ------ inclusion threshold ------
      0.016   14.9   0.8      0.076   12.7   0.0    2.5  3  Hydrolase_3    haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.3   0.0   6.4e-23   2.9e-19       5     180 ..     258     474 ..     254     475 .. 0.92

  Alignments for each domain:
  == domain 1  score: 69.3 bits;  conditional E-value: 6.4e-23
                   -EEEEE-TTS-EEEEGGG--TTSEEEE...ETT-B--SEEEEEEE-SEEE-TTTS---S-EE-.................G-TTEE-TT-EEEE... CS
  E1-E2_ATPase   5 ptakvirdgteeeidakelvpGDivll...kagdrvpaDgrivegsaevdesaLTGEslpvek.................ekgdmvfsGtvvvs... 78 
                      +v+r +++eei++++l pGD+v +   k+ + v++D+ +v+gsa v+e++L GEs+p  k                 +k++ +++Gt v++   
    KHJ33104.1 258 YDIWVFRKNKWEEIRSNKLLPGDLVSVgrtKEDSGVACDMLLVQGSAIVNEAMLSGESTPLLKdsillrppnarleplglDKNSFLYGGTKVLQith 354
                   567899*******************9844356888************************************************************** PP

                   ..................-EEEEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTTHHHHHHHHHHHH CS
  E1-E2_ATPase  79 ..................geakavVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvflialllgkslaeallralallva 157
                                       a avVt+tg +t  g ++r + +++++ +    ++  ++ +l +++++++ +v+   + + ++  + +l  + ++++
    KHJ33104.1 355 tnneekpkllsgvptppdNGAMAVVTKTGFETSQGSLVRTMIYSTERVSANNAEALLFILFLLIFAIAASWYVWDEGVKKDRKRSKLMLDCILIITS 451
                   *****************98888**********************9999999999999999999999998888888888888877799999******* PP

                   HS-TTHHHHHHHHHHHHHHHHHH CS
  E1-E2_ATPase 158 aiPcaLplavplalalgarrlak 180
                   ++P+ Lp+ ++la+ +++++l++
    KHJ33104.1 452 VVPPELPMELSLAVNTSLAALSR 474
                   *********99999888888776 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.1   4.1e-10   1.8e-06       1     156 [.     491     754 ..     491     771 .. 0.73
   2 !   18.2   0.0   5.3e-07    0.0024     161     209 ..     816     868 ..     791     869 .. 0.78

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 4.1e-10
                 SSEEEEESBTTTBCHHHHHHHHHHHH..........................CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH...ETTTE... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx..........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxx... RF
   Hydrolase   1 iktvvfDkdGTLttgepsvedvivsa..........................alalaaaletgsehpigkalvaaakarsgaltgfat...figrg... 67 
                 +++ +fDk+GTLt ge  v++ i+ +                                                  + +    t  a+           
  KHJ33104.1 491 VDVACFDKTGTLT-GEDLVVEGIAGLelsetgsgqklqtnsanihiipvaqaS----------------------METILVLATAHAVvklD---Egdi 563
                 5789*********.998888888888566433333333222222222222221......................22222222222221110...1233 PP

                 ............................................................................HHHHTHHHHHHHH..HCHHHHHH CS
                 ............................................................................xxxxxxxxxxxxx..xxxxxxxx RF
   Hydrolase  68 ............................................................................ayaigkpewltal..dippdlga 88 
                                                                                                +g pe + ++  +ip+++++
  KHJ33104.1 564 vgdpmekatltsigwtlgkndtlscqksttadslnalnsvqikrrfqfssalkrqssiaiitnqnpgsnkkirstfLGVKGAPETIMKMliKIPTNYEE 662
                 333444444444445566667888888888888888888888888899999999999999999999999999999999999999999999********* PP

                 HHHHHHHHCHHHHHH..........................TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxx..........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  89 aigsaqsqgrtvall..........................qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraanqlG 156
                 +     ++g  v  l                          + +  + + ++ p  +k++a++ ++ L++   +vv++tgd+p ta ++a +++
  KHJ33104.1 663 TYKHFTRKGSRVLALafkflatdselsigkinelkreeaesELHFAGFLVLHCP--LKEDAKKSIQMLNESSHRVVMITGDSPLTACHVAYEVD 754
                 ***********9999********************9877554455555555555..*******************************9999998 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 5.3e-07
                 SEEEEHHCES....STTTSHHHHHHHHHHHTSTGGGEEEEESSHHHHHHHHHT CS
                 xxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 161 daviasdiet....vakpspegkvaaireLqgkpeevamVGDgvnDaaalaaA 209
                 d +i ++i       a +sp++k++++  L+  +  ++m GDg nD+ al++A
  KHJ33104.1 816 DKEILKTIYRnswvYARVSPKQKEEILMGLKNLGYYTLMAGDGTNDVGALKQA 868
                 455555555567889***************955555****************9 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   6.9e-06     0.031      15      86 ..     559     651 ..     539     656 .. 0.80
   2 ?   -1.1   0.0      0.45     2e+03      44      65 ..    1214    1235 ..    1164    1242 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 6.9e-06
  Cation_ATPase  15 devkllGnktEsALlvlaekl.............gldteelreetkkvqeipFnssrKrmsvvlkle........pekkvrlyvKGApeiilk 86 
                    de +++G++ E A l  +                + d  ++ ++ ++ + ++F+s  Kr+s++  ++        +  +  l vKGApe i+k
     KHJ33104.1 559 DEGDIVGDPMEKATLTSIGWTlgkndtlscqkstTADSLNALNSVQIKRRFQFSSALKRQSSIAIITnqnpgsnkKIRSTFLGVKGAPETIMK 651
                    666789999999977776666577777777766666666777779999***************9999999*965555566688********97 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.45
  Cation_ATPase   44 eetkkvqeipFnssrKrmsvvl 65  
                     e ++k++ +pF+ + K  +++ 
     KHJ33104.1 1214 EINEKMRLVPFSTEFKLTMTAT 1235
                     458999********99988875 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.36   1.6e+03      18      53 ..     719     754 ..     716     762 .. 0.79
   2 ?   12.7   0.0   1.7e-05     0.076     206     233 ..     852     879 ..     817     893 .. 0.89
   3 ?   -4.0   0.4       2.1   9.5e+03      68      94 ..    1280    1306 ..    1278    1308 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.36
                  HHHHHHHHHHHHTTSEEEEE-SS-HHHHHHHHHHCC CS
  Hydrolase_3  18 ektkeaikklkekgikvviATGRslravlpvleelg 53 
                  e +k+ i+ l e  + vv  TG s+ ++ +v+ e++
   KHJ33104.1 719 EDAKKSIQMLNESSHRVVMITGDSPLTACHVAYEVD 754
                  677889999999999999999998888877776666 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 1.7e-05
                  EEEEESSGGGHHHHHHSSEEEEETTS-H CS
  Hydrolase_3 206 viafGDgeNDieMLeaaglgvAmgnase 233
                  ++  GDg ND+  L++a +gvA+ n+s+
   KHJ33104.1 852 TLMAGDGTNDVGALKQAHIGVALLNGSQ 879
                  6788*********************986 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 2.1
                   CTTTEEEEE--B-HHHHHHHHHHHHHT CS
  Hydrolase_3   68 dekgkilykstiskedvkeiikllken 94  
                   d++++i ++++is+++v+e+ k l ++
   KHJ33104.1 1280 DHRNQISSEEEISQAAVEELEKKLAQK 1306
                   678899999999999999998888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1052  (0.0586759); expected 358.6 (0.02)
Passed bias filter:                      635  (0.0354175); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.86u 0.28s 00:00:01.14 Elapsed: 00:00:00.42
# Mc/sec: 9447.19
//
Query:       KHJ33105.1  [L=309]
Description: putative an1-like zinc finger [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-20   73.5  27.5    2.7e-11   43.5   8.2    2.2  2  zf-AN1        AN1-like Zinc finger
    0.00034   20.8  22.8      0.002   18.3   7.8    2.7  2  IBR           IBR domain, a half RING-finger domain
  ------ inclusion threshold ------
        1.8    9.1   7.7        1.1    9.8   0.6    3.2  3  zf-H2C2_2     Zinc-finger double domain
        2.6    8.5  21.3        6.3    7.2   8.0    2.3  2  Transp_Tc5_C  Tc5 transposase C-terminal domain


Domain annotation for each model (and alignments):
>> zf-AN1  AN1-like Zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   8.2   5.9e-15   2.7e-11       1      38 [.      23      60 ..      23      62 .. 0.96
   2 !   36.1  11.3   1.2e-12   5.4e-09       1      38 [.      90     131 ..      90     132 .. 0.89

  Alignments for each domain:
  == domain 1  score: 43.5 bits;  conditional E-value: 5.9e-15
      zf-AN1  1 CsfksCkkkdflpfkCryCgkvFClkHrlpedHdCkkl 38
                C+ k C+++dflpf+C++Cg +FCl+Hr +++H+C+ +
  KHJ33105.1 23 CQLKFCSRLDFLPFQCESCGYTFCLDHRSETAHQCTRA 60
                9**********************************975 PP

  == domain 2  score: 36.1 bits;  conditional E-value: 1.2e-12
      zf-AN1   1 CsfksCkkkdflp....fkCryCgkvFClkHrlpedHdCkkl 38 
                 C+ ++Ck+ + ++    ++C +C++++ClkHrl+++HdC +l
  KHJ33105.1  90 CASSNCKTIIGTSlsisVHCTSCNQSYCLKHRLKDKHDCCNL 131
                 999*******5555577**********************876 PP

>> IBR  IBR domain, a half RING-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   7.1    0.0011       4.8      38      57 ..      30      55 ..       8      59 .. 0.73
   2 !   18.3   7.8   4.4e-07     0.002      16      55 ..      85     123 ..      69     130 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0011
         IBR 38 s.....vtCskCgfefCfnCkkew.H 57
                +      +C++Cg+ fC+++++e  H
  KHJ33105.1 30 RldflpFQCESCGYTFCLDHRSETaH 55
                24455578************987635 PP

  == domain 2  score: 18.3 bits;  conditional E-value: 4.4e-07
         IBR  16 pnlkwCprpdCeaiieksegcksvtCskCgfefCfnCkke 55 
                 +  ++C +++C++ii  s +  sv+C++C++++C++++ +
  KHJ33105.1  85 EMERYCASSNCKTIIGTSLS-ISVHCTSCNQSYCLKHRLK 123
                 3359**********988777.5688**********99844 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.6   0.00025       1.1      14      24 ..      35      45 ..      31      45 .. 0.94
   2 ?    1.1   0.2      0.14   6.2e+02       8      17 ..      48      57 ..      46      59 .. 0.89
   3 ?    0.2   0.0      0.27   1.2e+03      15      24 ..     107     116 ..     101     116 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00025
   zf-H2C2_2 14 pyeCplCdkaF 24
                p++C++C+++F
  KHJ33105.1 35 PFQCESCGYTF 45
                8*********9 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.14
   zf-H2C2_2  8 kHtgekpyeC 17
                 H++e+ ++C
  KHJ33105.1 48 DHRSETAHQC 57
                5********* PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.27
   zf-H2C2_2  15 yeCplCdkaF 24 
                 ++C +C+ ++
  KHJ33105.1 107 VHCTSCNQSY 116
                 68****9876 PP

>> Transp_Tc5_C  Tc5 transposase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   5.3    0.0016       7.4      29      63 .]      22      57 ..      16      57 .. 0.87
   2 ?    7.2   8.0    0.0014       6.3      26      62 ..      91     128 ..      79     129 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0016
  Transp_Tc5_C 29 dCkiegCselafi..kCarCkellCFdHfvvsekhlC 63
                  +C+++ Cs l f+  +C  C  ++C dH   ++ h C
    KHJ33105.1 22 HCQLKFCSRLDFLpfQCESCGYTFCLDHRS-ETAHQC 57
                  7***********7668************87.677776 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0014
  Transp_Tc5_C  26 tsedCkiegCselaf.ikCarCkellCFdHfvvsekhl 62 
                   +s +Ck    ++l++ ++C  C+++ C +H +  ++ +
    KHJ33105.1  91 ASSNCKTIIGTSLSIsVHCTSCNQSYCLKHRLKDKHDC 128
                   4567764444444444**************99655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1018  (0.0567795); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2270.88
//
Query:       KHJ33106.1  [L=258]
Description: putative ribosomal protein s5 domain 2-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-33  116.1   0.2    2.1e-33  115.6   0.2    1.2  1  RNase_PH  3' exoribonuclease family, domain 1


Domain annotation for each model (and alignments):
>> RNase_PH  3' exoribonuclease family, domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.6   0.2   1.2e-37   2.1e-33       1     132 []      22     158 ..      22     158 .. 0.90

  Alignments for each domain:
  == domain 1  score: 115.6 bits;  conditional E-value: 1.2e-37
                 EEEEEEEEESSSSTTSEEEEEEECCEEEEEEEEEEEEE........E-TCCG--CC....EEEECCCCECCCCEC-C...S...HHHHHHHHHHHHHHC CS
    RNase_PH   1 elRslsietgvlsqanGSaylelGdtkvlasvtgpiee........rpseerddae....galdveveyapfasgerrregrpsdeeielsrlleralr 87 
                 elR l++++ ++++a+GS+yl++G+tkv+++vtgp+e         +      +a+      ++v + +a f++++r+r+ r++++  el++++  a+ 
  KHJ33106.1  22 ELRHLTAQISTQASADGSSYLKMGNTKVICTVTGPSEGklasrqtiT------TAGggdkADIQVLISIAGFSTVDRKRKTRNDKRIFELQNIIAGAFA 114
                 79**********************************98766433221......222444334*****************9******************* PP

                 CTC-CCGCCTCEEEEEEEEEECCCS-CHHHCHHHHHHHHHCTCEE CS
    RNase_PH  88 psillekkpkstididitvlssdggslldalinaaslALadagip 132
                 +si ++ +p s i i++ +ls+dg s+l+alina++lAL+dagip
  KHJ33106.1 115 QSIFTNLYPYSVISITLDILSQDG-SMLAALINATTLALVDAGIP 158
                 ************************.*******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       538  (0.0300073); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 2053.67
//
Query:       KHJ33107.1  [L=69]
Description: putative f0-atpase subunit k protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.2e-27   93.6   0.2    7.8e-27   93.4   0.2    1.0  1  ATP19     ATP synthase subunit K


Domain annotation for each model (and alignments):
>> ATP19  ATP synthase subunit K
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.4   0.2   4.3e-31   7.8e-27       1      67 [.       1      68 [.       1      69 [] 0.88

  Alignments for each domain:
  == domain 1  score: 93.4 bits;  conditional E-value: 4.3e-31
                XXXX---STTSS--S-SHHHHHHHHH--XXXXXXXXXX.XX...XXXXXXXXXXXXXXXXXXXXXXXX CS
       ATP19  1 MgaaYtIaGravkshyLAlgtLgttglivylamggskk.kkaaaappinasssdEedfIknFlaeaek 67
                M+++YtIaGr+++sh+LA+ tL t+++ ++l  +g++k kk a+ ppinasss+Ee fIk+Fl++ae+
  KHJ33107.1  1 MVQMYTIAGRQIGSHVLAMITLSTIFGTTALFASGGSKtKKLAQGPPINASSSEEESFIKDFLKSAET 68
                9************************8776665555555388888*********************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       291  (0.0162307); expected 358.6 (0.02)
Passed bias filter:                      234  (0.0130515); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.19s 00:00:00.55 Elapsed: 00:00:00.37
# Mc/sec: 564.69
//
Query:       KHJ33108.1  [L=334]
Description: putative siroheme synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-40  137.1   0.1    8.4e-40  136.6   0.1    1.2  1  CENP-L    Kinetochore complex Sim4 subunit Fta1
  ------ inclusion threshold ------
       0.93    9.7   6.1       0.89    9.7   1.2    2.2  2  PBECR4    phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4


Domain annotation for each model (and alignments):
>> CENP-L  Kinetochore complex Sim4 subunit Fta1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.6   0.1   9.4e-44   8.4e-40       2     162 ..     137     296 ..     136     297 .. 0.94

  Alignments for each domain:
  == domain 1  score: 136.6 bits;  conditional E-value: 9.4e-44
      CENP-L   2 fthLPLLllrmpaslkkavtdfLsttFDcrvspLrlssasLvsaleswlatlsvaarra.........lqslvkdlqltlsFavppeapglktlditip 91 
                 f h+PLLll+mp +l+k +td+L++tFD+r+s+L ++++ L  ++e++++++ + + ++         +++++kd++l l+F +p+ ++ lkt+di++p
  KHJ33108.1 137 FHHFPLLLLKMPVKLQKSFTDYLASTFDTRISSLFIGEECLKDCFEKYISDVCLYQLSNdenmemnikIENVIKDTVLRLGFDLPNGSTLLKTIDIQVP 235
                 89**************************************************9944444567889999******************************* PP

      CENP-L  92 aedlreflragedsseeddttndeesqpFleaLasylkkhlalnldhpavrvskvscgafvlseegRlKla 162
                 ++dl++++r  ++           ++ +F+e +  yl+ hlal++++ +vr++++sc+af+l  eg++Kl+
  KHJ33108.1 236 SKDLSNMIRMSKT----------ASRVQFFEVIGDYLRAHLALDIQNSKVRITRISCAAFILDAEGKFKLT 296
                 *********7764..........5689******************************************97 PP

>> PBECR4  phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   1.2    0.0001      0.89      13      41 ..     110     139 ..     107     141 .. 0.92
   2 ?    2.0   0.3     0.023   2.1e+02      91     161 ..     184     255 ..     174     262 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0001
      PBECR4  13 Lankeylivy.rkkklkelevrFskenFpH 41 
                 ++n++y  ++ ++k++ +++++F k+ F+H
  KHJ33108.1 110 YENTKYRAIFlKDKDISNYNIDFTKNGFHH 139
                 6899999999999***************** PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.023
      PBECR4  91 ildsnsfvfefikkfskikadyliekekknvkgilglvfdengk......dkfyvsnflleknieikkktkkekkvl 161
                    s++++++   ++ +++++  ie+  k++  +l l+fd  +        ++ v++ ++++n+++++kt+   +++
  KHJ33108.1 184 Y-ISDVCLYQ-LSNDENMEMNIKIENVIKDT--VLRLGFDLPNGstllktIDIQVPS-KDLSNMIRMSKTASRVQFF 255
                 4.57778888.89999999999999999965..555555533333577766666666.4444456677777666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       667  (0.0372023); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.37
# Mc/sec: 2693.09
//
Query:       KHJ33109.1  [L=954]
Description: hypothetical protein EV44_g5064 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.9e-05   22.6  12.7    0.00013   21.8  12.7    1.3  1  Plasmodium_HRP  Plasmodium histidine-rich protein (HRPII/III)
    0.00041   20.2  10.9     0.0015   18.4  10.9    1.9  1  DUF4573         Domain of unknown function (DUF4573)


Domain annotation for each model (and alignments):
>> Plasmodium_HRP  Plasmodium histidine-rich protein (HRPII/III)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8  12.7   1.5e-08   0.00013      54     195 ..      86     227 ..      72     254 .. 0.55

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 1.5e-08
  Plasmodium_HRP  54 aadahhahhaadahhahhaadahhahhaadahhahhaadahhahhaadahhahhaadaahahhaadahhahhaadahhaadahhaayahhahhaa 148
                     a+    a h+++   a  a     a h+++   a  a +   a h ++   a + ++  +a h  +   a h  ++  a +      a  a++  
      KHJ33109.1  86 AKKIEEADHVTEIDEADQAKKIEEADHVTEIDEADQAKKIEEADHVTEIDEADQVTEIDEADHVKKIEEADHVKESEEADQVTEIDEADQAKKIE 180
                     23334444444444555555555555555555555555555566666666666666666666666555566666655555555555555666666 PP

  Plasmodium_HRP 149 dahhaadahhaadahhaadahhaadshtahhaadahhaadahhadda 195
                     +a h ++   a +a++  +a+  ++  +a  a+  + a++a++ ++a
      KHJ33109.1 181 EADHVTEIDEAGQAKKIEEADQVTEIDEADQAKKIKEADQAKKIEEA 227
                     66666666666666666555555555555555555555555444443 PP

>> DUF4573  Domain of unknown function (DUF4573)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4  10.9   1.6e-07    0.0015      10     166 ..      79     235 ..      75     250 .. 0.91

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1.6e-07
     DUF4573  10 eiqPlkgvkeieppqpggkddplgaeekkkdlravteveplkgvaeieplkavseiqPlravserdplgaveeieppraasemkPlktaeniepleaar 108
                 ei+  ++ k+ie    + ++d     +k++++  vte++      +ie +  v+ei+    v e+d    v++ie+   + e +   ++ +i+    a+
  KHJ33109.1  79 EINEADQAKKIEEADHVTEIDEADQAKKIEEADHVTEIDEADQAKKIEEADHVTEIDEADQVTEIDEADHVKKIEEADHVKESEEADQVTEIDEADQAK 177
                 56667889999999999999999999**************99999***999************************999999999999999999999999 PP

     DUF4573 109 elePeeavgkieqlqlvetipkenesseiePlegsqevepaeevqlieplgeveqiqp 166
                 ++e    v +i+ +   ++i+   ++ ei+ +   +++  a + + ie  g+v++++ 
  KHJ33109.1 178 KIEEADHVTEIDEAGQAKKIEEADQVTEIDEADQAKKIKEADQAKKIEEAGQVKESEE 235
                 9999999999999999999999999999999999999999999999999999888764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (954 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1699  (0.0947627); expected 358.6 (0.02)
Passed bias filter:                      236  (0.013163); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.80u 0.25s 00:00:01.05 Elapsed: 00:00:00.44
# Mc/sec: 6486.98
//
Query:       KHJ33110.1  [L=197]
Description: putative 50s ribosomal protein l24 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.6e-17   62.3   1.6    3.6e-17   62.3   1.6    1.6  2  Ribosomal_L28  Ribosomal L28 family
  ------ inclusion threshold ------
       0.12   11.9   0.2       0.21   11.0   0.2    1.4  1  CENP_C_N       Kinetochore assembly subunit CENP-C N-terminal


Domain annotation for each model (and alignments):
>> Ribosomal_L28  Ribosomal L28 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.78     7e+03      12      20 ..      13      26 ..      11      39 .. 0.49
   2 !   62.3   1.6   4.1e-21   3.6e-17       4      59 ..      60     117 ..      58     118 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.78
                   -------S.....- CS
  Ribosomal_L28 12 fGnnvshs.....k 20
                   +G+n+ +s     k
     KHJ33110.1 13 IGKNYCKSfssttK 26
                   56666555433330 PP

  == domain 2  score: 62.3 bits;  conditional E-value: 4.1e-21
                    TTT-.-----------S-...-SSS-BTTEEEEEEEE.TTTEEEEEEEEHHHHHH--. CS
  Ribosomal_L28   4 eltG.kkpqfGnnvshskn.kTkRtwkPNlqkvrlwseelgrkvrikvstkcLRtidk 59 
                    +l+G +k++fGn vs++++ kT+R w+PN+q + l+se+l ++++i+++t++LRt++k
     KHJ33110.1  60 GLYGtQKIRFGNMVSEKNEiKTRRHWRPNVQVKELYSESLCKNISIRITTRVLRTLRK 117
                    58999************7779***********************************98 PP

>> CENP_C_N  Kinetochore assembly subunit CENP-C N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.2   2.4e-05      0.21     169     208 ..       3      43 ..       1      45 [. 0.90

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 2.4e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXX CS
    CENP_C_N 169 ssvaqkretytfenSvnmlsSsteislK.tkKrLnfeDkdi 208
                 ss +q+r+ +  +n     sS+t+i  K tk+rL fe  ++
  KHJ33110.1   3 SSSSQQRWLVIGKNYCKSFSSTTKILAKsTKQRLKFEHNEV 43 
                 7889*********************9886899*****8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1451.24
//
Query:       KHJ33111.1  [L=251]
Description: putative protein rot1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-88  293.3   0.0      1e-87  293.1   0.0    1.0  1  Rot1      Chaperone for protein-folding within the ER, fungal


Domain annotation for each model (and alignments):
>> Rot1  Chaperone for protein-folding within the ER, fungal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  293.1   0.0   5.7e-92     1e-87       1     209 []      25     249 ..      25     249 .. 0.93

  Alignments for each domain:
  == domain 1  score: 293.1 bits;  conditional E-value: 5.7e-92
        Rot1   1 lvGtWssksnkvltGpgfydpveekliePsltGisysFteDGfyEealyrvvanpknpsCpkavlqfqHGtyeleangslvltPievDGRqllsdpCkk 99 
                 lvGtW+sks+++ltG  fydp+++ +iePs+tGisysFt+DGfyEea+yr+v np++psCpka+lqfqHG++  + +gsl+ltP++vDGRql+s+pC+ 
  KHJ33111.1  25 LVGTWASKSAATLTGAAFYDPIHDVFIEPSHTGISYSFTADGFYEEAYYRAVPNPSKPSCPKAILQFQHGKFIENLDGSLTLTPFAVDGRQLVSNPCS- 122
                 89***********************************************************************************************7. PP

        Rot1 100 kkstytrynqselfkkyevlvdeyhgvkrlnlyqfdgspmqplylaykppqmlPtetlnptekase...kvkrsles.......eeklkknavkkke.. 186
                 k+++ytrynqsel+k+y+v++d+y ++ rl+l +fdg+++ p+ylaykppqmlPt tlnp++++++   kvkr+ e+       e +l+kna   k+  
  KHJ33111.1 123 KHAVYTRYNQSELMKNYRVSIDSYMKIPRLDLHKFDGAKLPPMYLAYKPPQMLPTVTLNPISRSTSsvkKVKRTSEQkhiieglEIPLNKNADLLKRni 221
                 579***********************************************************9999888888988778999999777777776665556 PP

        Rot1 187 .....eslnadklwwvgvlllavgsval 209
                        ++ d +ww g++l+ +g++++
  KHJ33111.1 222 rpspiLAFDPDIIWWGGIFLTLLGGAVY 249
                 666666678***************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 1909.08
//
Query:       KHJ33112.1  [L=539]
Description: putative 3-phytase a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.2e-61  207.4   0.0    5.2e-61  207.1   0.0    1.1  1  His_Phos_2  Histidine phosphatase superfamily (branch 2)


Domain annotation for each model (and alignments):
>> His_Phos_2  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  207.1   0.0   2.9e-65   5.2e-61       2     383 .]     144     501 ..     143     501 .. 0.94

  Alignments for each domain:
  == domain 1  score: 207.1 bits;  conditional E-value: 2.9e-65
                 EEEEEEEEE--SBB-SHHHHHHHHHHHHHHHH.........HHCHHTGCCGGGGT.........--SSSTTS.B-HHHHHHHHHHHHHHHHHCHTCCHT CS
  His_Phos_2   2 LksvvvviRHGdRtPkqkvkksvtspiflsllkkhkeKlkqlktalekkghfpgtyrkveveklqlilkwggelthaGrkqaeelGrqfrqrYplgLlr 100
                 ++++++++RHG+R P+  ++  + ++i+ +++         ++ta+  +++f ++         +++l+++  l+ +G+kq++++G++f  rY+  + r
  KHJ33112.1 144 ITFAQILSRHGARDPTLHRTQIYHKLIDDIQS---------NATAYSDQFAFIKDF--------NYTLGADM-LSVFGQKQMVDSGIRFFDRYR-TISR 223
                 789*****************************.........8***********877........********.*********************.9999 PP

                 TSS--TTEEEEEESSHHHHHHHHHHHHHHCHCCC---S-TTSTTGGG-TTTTCCCEEEHHHHCCCCHHCTTSHHTCHHHCHHHTGGHCHHHHCHCCCCC CS
  His_Phos_2 101 lhltykdlkirassegRviaSAaafakGllglegeltdllskdkdllddsnaakdlldeakkklkelltegaeacpafewpikvakrvdelvkylkedm 199
                 +     +++iras+++Rvi+SA+++++G++++       +++d+  +   + +  +++e   + ++++t ++  c++fe+ ++ ++ + ++ + +++++
  KHJ33112.1 224 E----ITPFIRASGQSRVIESAQNWTQGFHKARM-----QDSDSNVREEYPYNILIISE---ETGSNNTLDHGLCQKFEN-APISEIGPNAKSIWASIF 309
                 9....58***********************9999.....99******************...77777778899*******.****************** PP

                 HHHHHHHCHHHCTTEEEE-HHHHHHHHHHHHHHHH..HHC.T-TTGGGCTH..HCHHHHHHHHHHHHHHHC........TTTCCCCHHHHHHHHHHHHH CS
  His_Phos_2 200 deniakrleqlcpgesnllakerwdklercfyekn..kfd.iskicdlydemkydalhnrylkdleelyklakvipqEygigpeeklkiGllllnpllk 295
                 +++ia rl++++pg  n++ +++ d+++ c +e+   +f+ +s++c+l++e   +++ ++y++ l ++y++          g+++++++G+++ n+l++
  KHJ33112.1 310 TPSIAARLNSNMPGV-NFTGENVIDLMSICPFETVtnEFGlMSPFCNLFSE--DEWHAYDYYQTLGKYYEY--------SWGNPLGPTQGVGFTNELIA 397
                 **************8.*******************87555479********..*****************9........******************** PP

                 HHCTSSSEECCS...........CCCECS-SEEEEEE-HHHHHHHHHHCTTTTTBTTB.SSS......TTT..HCCCS-CT-EEEEEEEEETCTTTEEE CS
  His_Phos_2 296 kilndlqrtree...........atperhvrlrlyfthdshiysllnaLglpeelagedslaa.....ldrlsaspelpymsqivfelyedssekkfyv 378
                 +++++++ +++               ++   l+++fthd++++s+++a+gl++++++++++       l+++s+s+++ ++s+ +fe++++   ++++v
  KHJ33112.1 398 RMTSKPVIDHTCtnstldnnpetFPISNSTVLYADFTHDNTMISIFSAMGLYNSTPPLSNTTLesaevLKGFSTSWMTSFGSRTYFEKMKCHGINEEMV 496
                 *********97699*******65444566677888***********************8777799**************************766679** PP

                 EEEEC CS
  His_Phos_2 379 rllls 383
                 r++++
  KHJ33112.1 497 RIIVN 501
                 **987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (539 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.21s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 4185.38
//
Query:       KHJ33113.1  [L=394]
Description: putative glycosyltransferase family 15 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   7.8e-113  377.0   7.4   8.9e-113  376.8   7.4    1.0  1  Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase


Domain annotation for each model (and alignments):
>> Glyco_transf_15  Glycolipid 2-alpha-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  376.8   7.4    5e-117  8.9e-113      56     324 ..      72     352 ..      26     353 .. 0.94

  Alignments for each domain:
  == domain 1  score: 376.8 bits;  conditional E-value: 5e-117
  Glyco_transf_15  56 e...nAtllalvrnselakilrsikkvekrFnkkfnYpyvfindepftekfkekieklveeadvefgeipkeewsyPefideekaakareelad 146
                          nAtllalv+n+el  ++ s++++ek +n+kfnYp++f nd pfte+fk++++  ++ ad ++ +ipke+w++P++i+ee  +++ + l +
       KHJ33113.1  72 FnriNATLLALVQNEELDGMIDSMRDLEKTWNSKFNYPWTFFNDVPFTEEFKRRTRAETK-ADCSYELIPKEHWEMPSWINEELYQESVKILQE 164
                      04569**************************************************99999.**********************99998887776 PP

  Glyco_transf_15 147 ..iaygdsesyrhmcRyysGlfykhellkkydyYwRvePdiklycdieyDvfkymkdekkiygFtlslkeieetiktlWdstkkflkenkefie 238
                        + yg  +sy++mcR++sG+fykh++l +++yYwRveP+++++cd++yDvf+ym+d++k ygFt++l++   +i+tlW++t+kf+++++e+++
       KHJ33113.1 165 ndVRYGALRSYHQMCRWNSGFFYKHPALANFQYYWRVEPKVHFFCDVDYDVFRYMQDNNKTYGFTINLYDSPGSIPTLWPETVKFMAQHPEYLH 258
                      67******************************************************************************************** PP

  Glyco_transf_15 239 eknslsflsdddqd........tynlCeFwsnfeigdldffrseayekfFeylDskGgffYerWgdapvhsiavslllpkdkihffedigyshd 324
                      e+nsl++l+d+ +         +y++C+Fwsnfei+dl ++rs+aye++F++lD++GgffYerWgdapvhsiav l+ + +++h+f+digy+h 
       KHJ33113.1 259 ERNSLRWLTDSTTRpehnlkanGYSTCHFWSNFEIADLSLWRSQAYEHYFDHLDRAGGFFYERWGDAPVHSIAVGLFEDSSRVHWFRDIGYQHI 352
                      ********99887678889999**********************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2851.03
//
Query:       KHJ33114.1  [L=966]
Description: putative exportin 1-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-29  102.7   3.1    4.6e-29  101.4   0.9    3.0  2  Xpo1            Exportin 1-like protein
    4.3e-08   33.0   0.3    1.3e-07   31.4   0.3    1.9  1  IBN_N           Importin-beta N-terminal domain
  ------ inclusion threshold ------
      0.051   13.5   2.0          2    8.4   0.0    4.1  3  UME             UME (NUC010) domain
      0.061   12.8   0.1       0.26   10.8   0.0    2.0  2  Ribosomal_S5_C  Ribosomal protein S5, C-terminal domain


Domain annotation for each model (and alignments):
>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       0.7   3.1e+03      30      83 ..      34      88 ..      31     102 .. 0.70
   2 !  101.4   0.9     1e-32   4.6e-29       3     149 .]     105     246 ..     103     246 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.7
                HHHHHHCT.HHHHHHHHHHHHHHHHHHHT.SHTTTSCHHHHHHHHHHHHHHHHHH CS
        Xpo1 30 dllsllssspsglelllriLkvlpeEiad.fsrskleqerrndlkdllrsnvqki 83
                ++l+++++s ++ +l++ iL++ +e  ++ f  ++l+ + + dl++  ++ ++ +
  KHJ33114.1 34 QFLESFQKSTEAWQLTIGILNSQAEAEVKlFAATTLRGKITYDLNQISTETLPSL 88
                6889999999999999999999887444448888887777777766655555555 PP

  == domain 2  score: 101.4 bits;  conditional E-value: 1e-32
                 HHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCT.HHHHHHHHHHHHHHHHHHHTSHTTTSCHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH CS
        Xpo1   3 flrnklaealaelflqeypnnWpsffddllsllssspsglelllriLkvlpeEiadfsrskleqer.rndlkdllrsnvqkilelllqileqsqskkqs 100
                  +r +l+++la l++q+   +W++++++++s+l ++++g  ++l +LkvlpeE+++ ++ +l++++ ++++ +ll++n+  +++ll ++ ++s++    
  KHJ33114.1 105 PIRVQLCVCLAILAIQM--ISWQNVLPTIVSSLGNDENGHSCILDFLKVLPEEVTEGRKINLTEDElQKRTTELLTNNIAPVAQLLVNYAQSSVE---- 197
                 6999*************..8*************************************************************************98.... PP

                 HHHHHHHHHHHHHHTTTS-HHHHHTSCHHHHHHHHCCSCCCHHHHHHHH CS
        Xpo1 101 selveavLkclsswvswidiglivnnpllnllfqlLsdpelreaavecL 149
                 +  +   +++++sw+++i+i+ +vn+pllnl+f++L +p  +eaa++cL
  KHJ33114.1 198 AAQNPHLINVITSWLREIPISDVVNSPLLNLVFNALRNPAAFEAAADCL 246
                 788889999***************************************8 PP

>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.3   2.9e-11   1.3e-07       1      72 [.      32      96 ..      32      98 .. 0.97

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 2.9e-11
                HHHHHHHHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHCGSXHHHHHHHHHHHHHHH CS
       IBN_N  1 AekqLkqlekqpgflsallqilanseselevRqlAalyLknlitkhWsdeeekqslpseekeqIrnnllnll 72
                A++ L+ ++k+ +++++ + il +++   ev+++Aa++L+ +it+  +      +++ e+  ++r+++l ll
  KHJ33114.1 32 AHQFLESFQKSTEAWQLTIGILNSQAEA-EVKLFAATTLRGKITYDLN------QISTETLPSLRDQILGLL 96
                7899************************.*******************......***************987 PP

>> UME  UME (NUC010) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.16   7.1e+02      39      60 ..      95     116 ..      77     126 .. 0.78
   2 ?    8.4   0.0   0.00044         2      33      74 ..     456     497 ..     440     523 .. 0.88
   3 ?   -0.1   0.0      0.19   8.5e+02      50      80 ..     655     685 ..     605     699 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.16
         UME  39 liklagssissalpqimacLqs 60 
                 l+k     +++++ q+++cL +
  KHJ33114.1  95 LLKTHTATVRPIRVQLCVCLAI 116
                 4455555688888899999965 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00044
         UME  33 ikaleeliklagssissalpqimacLqsaleidelrsaalsv 74 
                 + +++++ +++ ++ +++lpqim +L +   +d+lr a++ v
  KHJ33114.1 456 LFSMRAMGRMVDKEENIVLPQIMPILVQLPLHDKLRFATIMV 497
                 66999999********************99999999998866 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.19
         UME  50 alpqimacLqsaleidelrsaalsvWatlls 80 
                 + p ++++L++ ++   +++  ++ W+ ++ 
  KHJ33114.1 655 IFPILSTILKTFINFTPICERICRNWRYMVI 685
                 34456999******************99985 PP

>> Ribosomal_S5_C  Ribosomal protein S5, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.62   2.8e+03      22      34 ..     314     326 ..     299     329 .. 0.77
   2 ?   10.8   0.0   5.8e-05      0.26      23      44 ..     407     428 ..     405     437 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.62
                     S-HHHHHHHHHHT CS
  Ribosomal_S5_C  22 aggavravlelaG 34 
                       + v a+le++G
      KHJ33114.1 314 FRPIVEAILECCG 326
                     568899*****99 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 5.8e-05
                     -HHHHHHHHHHT--SEE---BS CS
  Ribosomal_S5_C  23 ggavravlelaGikDvlakslg 44 
                     g++ ++ +e++G++ +l+k+lg
      KHJ33114.1 407 GDVLKDCCEVMGVTECLTKVLG 428
                     78999****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (966 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       601  (0.0335211); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.28s 00:00:01.00 Elapsed: 00:00:00.43
# Mc/sec: 6813.65
//
Query:       KHJ33115.1  [L=237]
Description: putative 5-formyltetrahydrofolate cyclo-ligase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-27   96.9   0.1    2.3e-27   96.1   0.1    1.4  1  5-FTHF_cyc-lig  5-formyltetrahydrofolate cyclo-ligase family


Domain annotation for each model (and alignments):
>> 5-FTHF_cyc-lig  5-formyltetrahydrofolate cyclo-ligase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.1   0.1   1.3e-31   2.3e-27       1     181 [.       3     222 ..       3     227 .. 0.84

  Alignments for each domain:
  == domain 1  score: 96.1 bits;  conditional E-value: 1.3e-31
                     HHHHHHHHHHHHHTS-HHHHHHHHHHHHHHHHTSHHHHH-SEEEE----.TTS---HHHHHHHHHTTEEEEEEEECSSC..........TEECEE CS
  5-FTHF_cyc-lig   1 KqelRkqllaalralseeevaaesealsqrieslkesqeakrvalyvsv.kgeidtkelikklleegkevllPrvrles..........gslkvv 84 
                     K++lR  ++++l++++ ++++++s  +++ +++ +++q+a+r+ +y+s+  ge++t+++++++l+ gk+v++P++ + s          +s+++v
      KHJ33115.1   3 KKQLRLLIKQKLSKVTSDSIKEQSFLVTNLVTKNVQYQNARRIGIYLSMpVGEVQTDSIVRDALKCGKQVFIPYIYEASkketinlhhkSSMDMV 97 
                     89***********************************************779******************************************* PP

                     EEEECCCCCCCCCHCTS..........SCE--TTECCBCGGGG-SEEEE--SEE.....ETTS-EE-SSTTHHHHHHHHHTS.T-........SS CS
  5-FTHF_cyc-lig  85 rlttlkeedslesgkyg..........lkePeeeeerelalekldlvlvPgvAf.....dkeGaRlGkGkGyyDrflarlkg.ga........gd 155
                     +l +l++ +sl++ ++g            e   ++ re++ e ld+++vPgvAf     ++   RlG+GkGyyD fl ++++ ++        ++
      KHJ33115.1  98 KLNSLADYESLQRDRWGipvidsktfdQRECIIQNSREQN-EGLDIIFVPGVAFqidprSNYVKRLGHGKGYYDSFLHQYHAkFHpksqfssnLK 191
                     *****************77777666665555555555553.5************5533334567***************9987541222222246 PP

                     --EEEEE--GGGEES.....-----ST---- CS
  5-FTHF_cyc-lig 156 kpltvglaldeqlve.....rlPleehDvpv 181
                     kp + gl l+eq +       +P+e hD ++
      KHJ33115.1 192 KPPLYGLSLKEQFLPidheiGIPMETHDHSL 222
                     7778888888888766555568888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.36
# Mc/sec: 1960.39
//
Query:       KHJ33116.1  [L=103]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1056  (0.058899); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 757.69
//
Query:       KHJ33117.1  [L=428]
Description: putative protein-er retention protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-95  318.1  12.9      8e-95  317.9  12.9    1.0  1  EXS       EXS family


Domain annotation for each model (and alignments):
>> EXS  EXS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  317.9  12.9   4.5e-99     8e-95       1     330 [.      18     401 ..      18     402 .. 0.89

  Alignments for each domain:
  == domain 1  score: 317.9 bits;  conditional E-value: 4.5e-99
         EXS   1 lplpyrvlllvvlglllwalnlhvlsklginyalifeldpr....sslsyrqlyelaalllllllllllllll.....saevdalellpllllllllll 90 
                 lplpyrv+l vv+g++ w+l+l+++s ++i+++l+++ +++    s + y ++y+la +l++ l+l+l+l+++     s+ v+ +++lp+ +ll+l+ +
  KHJ33117.1  18 LPLPYRVALAVVFGVWAWGLALQYFSLIKIDVPLLINPQREviqaSPPAYISTYRLAFTLTAPLVLSLFLFWSlshgnSSLVIYYDFLPISYLLILIGI 116
                 69**********************************9976555569999*****************99999997766666666899************* PP

         EXS  91 lllplnilyrssrrrflrtllrillaplapve...fadfllaDiltSlakvlgDlaltvclya....sswsee.....drkcgsssvvvplllslPyli 177
                 lllp++ l++++r rf+ tl+ri +++la+++   fad++laD+ltS+ak+++Dl++++c++          +     +r cgs+ +++p+++++Pyli
  KHJ33117.1 117 LLLPIRPLCSPGRSRFISTLRRISIGGLAQTKdgkFADIMLADVLTSYAKIIADLFVVLCMFLskesR----SatarpNRSCGSQ-YLIPIITAIPYLI 210
                 *****************************999999***************************534431....2345558899888.9************ PP

         EXS 178 RfrQclreyrd.......tkkrphllNalKYatafpvivlsalqrlsksd.......esestlrvlwllaalvnslysfiWDvtmDWgLlkllk..... 257
                 R+rQcl+e+++       ++  +hl+NalKY+t+fpvi+lsal+++++s+        ++++++++wl+a+++ns ysf+WDv++DW+L  l+      
  KHJ33117.1 211 RLRQCLIEFFRahstgglDSGVRHLANALKYTTGFPVIALSALYHNVSSNlteesdgLTRKSVYYCWLTAIFINSSYSFYWDVAKDWDLA-LFPafsec 308
                 **********9999887744458**********************9999999999998899999**************************.77755566 PP

         EXS 258 .........s...........knwflRdellypkkwvYylaivldlvlRftWslklsshlhsiqeselgvfllellEvlRRwvWvffRvEnEh 330
                          s           ++++lR++l++p k +Yylai+ldl+lRf+W+++ls+    +++se g++ll+++Ev RRw+W+f+R ++E+
  KHJ33117.1 309 lhinkhskfSnqynvprhrkkTSFGLRPRLFLPYKEFYYLAIFLDLFLRFSWLINLSPLTVYFANSEGGITLLQFAEVGRRWMWIFLRSDAEW 401
                 6666555550555566666667899**********************************9999*****************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (428 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 3111.30
//
Query:       KHJ33118.1  [L=383]
Description: putative developmental regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-91  304.7   0.1    6.4e-91  304.7   0.1    1.5  2  Velvet    Velvet factor


Domain annotation for each model (and alignments):
>> Velvet  Velvet factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.3      0.28     5e+03      86      88 ..      36      38 ..       3      86 .. 0.47
   2 !  304.7   0.1   3.6e-95   6.4e-91       1     249 [.     113     370 ..     113     371 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.28
                --- CS
      Velvet 86 ass 88
                a+s
  KHJ33118.1 36 ANS 38
                111 PP

  == domain 2  score: 304.7 bits;  conditional E-value: 3.6e-95
                 EEEEEEE---EEE---SS-S-----BS--EEEEEEEETTT-SB--GGG---TTEEEEEEEEETTSSSB--EE--.---------...------------ CS
      Velvet   1 ysLevvQqPkrARmCgfgdkdrrpidPppvvqLrvtdaetnsevdveeldssffvvtvdLwsedgtkevnlvkssssasssiss..easssssqssees 97 
                 y+L vvQqP+rARmCgfgdkdrrpi+Ppp+v+L+vtd +t++e d++++++ +fv++vdLws+d+++evnlv++ +s++++++s  +  s   ++++ +
  KHJ33118.1 113 YQLVVVQQPQRARMCGFGDKDRRPITPPPCVKLIVTDLDTGKESDFNTIEHGMFVLNVDLWSADKKSEVNLVQNYNSQATYSQSygQ--SNGQTYPSPN 209
                 99**********************************************************************999999888888432..3332222222 PP

                 -.....---------------------------------------------EESEEE--EEE-EEEE-TT--EEEEEE---EEESS-EEEEEEEEEEE- CS
      Velvet  98 s.....sspksqassaessapsssaapsaqeekekkeatlssssnqasskltrnLiGslvasafrlkdpedkpgifFvfqDLSVRteGtFrLrfrlvnv 191
                       ++++++ +++ + +p+ s+++     +++ +++  + +n+a++++trnLiGsl+asafrl+dpedk gi+Fv+qDLSVRteG FrLrf++vnv
  KHJ33118.1 210 GysqppTPQQIYFNTSGQLSPYPSRSY-----SSQDSNHRIHINNPAQGMFTRNLIGSLAASAFRLTDPEDKIGIWFVLQDLSVRTEGDFRLRFSFVNV 303
                 233333333444444444444444333.....444445555667888**************************************************** PP

                 B-S.........--B--S..SEEEEEEEEE---EEEE-TTT--------HHHHHHHHTT----XXXX CS
      Velvet 192 gae.........avaveekegsapvlaevfSdpFtVysakkFpGvlesTaLskalakqGikipiRkd 249
                 ++          ++  + ++g++pvla++fSd+F Vysak+FpGv+esT+Ls+++a+qGikipiRkd
  KHJ33118.1 304 SEIspppctqngTNGLSLNKGKSPVLARCFSDVFSVYSAKRFPGVVESTPLSRCFATQGIKIPIRKD 370
                 **999****99967777778*********************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      257  (0.0143343); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2799.65
//
Query:       KHJ33119.1  [L=1256]
Description: putative cytoplasmic response regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.4e-20   72.3   0.0    9.8e-20   71.1   0.0    1.6  1  HATPase_c     Histidine kinase-, DNA gyrase B-, and HSP90-lik
    2.7e-17   63.0   0.1    6.4e-17   61.7   0.1    1.7  1  Response_reg  Response regulator receiver domain
    8.1e-10   38.6   0.1    2.5e-09   37.0   0.1    2.0  1  HisKA         His Kinase A (phospho-acceptor) domain
  ------ inclusion threshold ------
      0.068   13.5   0.0       0.15   12.3   0.0    1.6  1  GAF_2         GAF domain


Domain annotation for each model (and alignments):
>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   0.0   2.2e-23   9.8e-20       2     111 ..     756     874 ..     755     875 .. 0.89

  Alignments for each domain:
  == domain 1  score: 71.1 bits;  conditional E-value: 2.2e-23
                 HHHHHHHHHHHHHHHHHHHHSTTTEEEEEEEE........EE....TEEEEEEEESSSSSTTHHHT.GTCSTTCHHCSTCHTSTSSSHHHHHHHHHHHH CS
   HATPase_c   2 dekrLrqiisnlvdNavkfatkageieveika........se....ddlvisveDnGiGipkedlk.klfekfsqddstkrggggtGlGlsivkklvel 87 
                 d+   r+i+ nl +Na+k+ t +g i+v++++        ++      l+++++D+G+Gi+++ lk +l ++f+q   +++ + g GlGlsivk++v  
  KHJ33119.1 756 DKGAWRRILMNLFSNAMKY-TLSGFIKVSLNVelpinspaDKepnySMLQLKISDSGRGISEDFLKlELYKPFTQ---EDSLSPGAGLGLSIVKAIVHD 850
                 566779*************.99*********988887665225778999*****************88888****...555678***********9999 PP

                 TTTEEEEEEETTTEEEEEEEEESS CS
   HATPase_c  88 mgGeiwvesepgrGttftftlple 111
                 ++G+i+++sepg Gt++t+++pl+
  KHJ33119.1 851 LNGKISFSSEPGTGTEVTVRIPLK 874
                 *********************997 PP

>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.7   0.1   1.4e-20   6.4e-17       1     111 [.    1127    1243 ..    1127    1244 .. 0.92

  Alignments for each domain:
  == domain 1  score: 61.7 bits;  conditional E-value: 1.4e-20
                    EEEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHH..ESEEEEESSCSSSEHHHHHHHHHHCT.....TTSEEEEEESSTSHHHHHH CS
  Response_reg    1 vlivdDdplvrellrqlleeegyeevaeaedgkealellkeek..vdlillDinmpgmdGlellkeireed.....pelpviiltahseeedave 88  
                    +l+v+D++++++ll   + + ++ +  +a +g eal+ +k++   +d i++Di+mp m+G+e  k+ir+ +     + +  i+lt++++e++++e
    KHJ33119.1 1127 ILLVEDNEINLRLLIATMHRLKL-KYVTALNGLEALNAYKQNMgrFDAIFMDISMPIMSGIESSKHIRTFEeennlKPVTLIALTGAANESTRTE 1220
                    89*****************9999.889999*********887667**********************99886555555999************** PP

                    HHHCTESEEEESSG-HHHHHHHH CS
  Response_reg   89 alkagaddflsKpfdpeeLlkal 111 
                    a++ g+d +l+Kp+ ++ ++++l
    KHJ33119.1 1221 AFSNGIDLYLTKPVPMKTIRSML 1243
                    ****************9999876 PP

>> HisKA  His Kinase A (phospho-acceptor) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   0.1   5.6e-13   2.5e-09       2      65 ..     605     667 ..     604     669 .. 0.94

  Alignments for each domain:
  == domain 1  score: 37.0 bits;  conditional E-value: 5.6e-13
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHC..T-HSSCHHHHHHHHHHHHHHHHHHHHHHHHCCHH CS
       HisKA   2 lgrflagvaHELrtPLsailgnaeaLkregklteelkeyletiesearrldhlvedlLdlsrie 65 
                 + +f+++++HELr PL+++l+ +e L+++ +l++ + ++ + i  +++ l++ ++ +Ld+s++ 
  KHJ33119.1 605 KIDFISSISHELRSPLHGVLASVEYLRES-DLDDFQIDMANNIYTSSKILLDTINHVLDFSKLN 667
                 779***********************995.89999999***********************985 PP

>> GAF_2  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.4e-05      0.15      69     138 .]     118     190 ..     113     190 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.4e-05
                 EEES-GGG-S-HHHHHHHHHTT--EEEEEE.-T.TS---EEEEES.......--HHHHHHHHHHHHHHHHHHH CS
       GAF_2  69 vilndleedpdkkglpaghaglrsflavPl.is.egrvvGvlnlyankppa.fdeedlelLeelaeqiaiaie 138
                 +++ ++ +d + k  + + + ++s+++vPl     g ++G ++++ +kp++ +  + +e+L+e+a++i+  +e
  KHJ33119.1 118 IFIGNISTDVRYKKFAPSLPLMKSMAVVPLkSVmHGMIIGTFSIVDSKPREdLPKDKIEFLSEMATTISEHLE 190
                 6788888888888888899999********766789*******976666666****************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.75u 0.27s 00:00:01.02 Elapsed: 00:00:00.42
# Mc/sec: 8898.52
//
Query:       KHJ33120.1  [L=438]
Description: putative bar domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-50  170.9   8.2    4.8e-50  170.4   8.2    1.1  1  BAR              BAR domain
    0.00028   20.1   3.2    0.00046   19.4   3.2    1.4  1  BAR_2            Bin/amphiphysin/Rvs domain for vesicular tra
  ------ inclusion threshold ------
       0.62   10.4  13.5       0.31   11.4   9.8    2.1  2  OmpH             Outer membrane protein (OmpH-like)
       0.69   10.3   3.3        1.1    9.6   2.3    1.8  2  PMEI             Plant invertase/pectin methylesterase inhibi
        6.7    6.0  16.4      0.081   12.3   8.6    1.8  2  GBP_C            Guanylate-binding protein, C-terminal domain


Domain annotation for each model (and alignments):
>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.4   8.2   1.3e-53   4.8e-50       1     235 [.       3     226 ..       3     229 .. 0.96

  Alignments for each domain:
  == domain 1  score: 170.4 bits;  conditional E-value: 1.3e-53
         BAR   1 lkKafnRasqlleekvgkaekTkLDedFeelerrldvteklieklvkelkeylqanpgarakqivleklkeqplelLaesmieagkelgedssfgkale 99 
                 ++K+f+R++q+++ek+g++ kT+ +++F+ le +++  ++ +e+l+k+++ y++++ +    +    k k +p +++++ mi++g+++ +ds+fg +l+
  KHJ33120.1   3 INKKFDRVKQWAGEKMGAEAKTNVSDQFKGLETEMNLRHEGMERLHKSMTVYVKSLSTRSEGED---KEKRLPIGYMGQMMIQHGEDFDSDSEFGRCLI 98 
                 68****************************************************8888777776...669***************************** PP

         BAR 100 kygeavkklaqteeelekrvetnfldplrellekefkeiqkerkklehkrlDyDaakarlkklktkkskkakdeekaeeelrkAqqkfeesneelkaeL 198
                 ++g+a++++a  +e+   +++  +l+ l+++l +++ke+q +rkkle++rl+yDa+ ++++k+k+++ +        eeelr+ ++k+ees+e++ +++
  KHJ33120.1  99 SMGRANDRVARYQESYVSNATCGWLESLERSL-AMMKEYQAARKKLENRRLAYDASLSKMQKSKKEDFRM-------EEELRSQKAKYEESSEDVLRRM 189
                 ********************************.*******************************888877.......********************** PP

         BAR 199 pnllalevefvnqlqafveaqldfhkqaaqlleqlqq 235
                 +++ + e++ + +l +f+ea+l++++++ + l +l++
  KHJ33120.1 190 QDIKEAEADSLADLGQFLEAELEYYDRCRDELIRLKR 226
                 ******************************9988876 PP

>> BAR_2  Bin/amphiphysin/Rvs domain for vesicular trafficking
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   3.2   1.3e-07   0.00046     177     280 ..     120     221 ..      16     227 .. 0.79

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.3e-07
       BAR_2 177 kefnkkLeellnqefkkvhelrkkVeesRlkfdtlrseveekekpeteeedkklleklEDefvsateeAvvvmkeilds.sklisllklfqkaqleYfe 274
                  +  + Le+ l+  +k+ +  rkk e+ Rl +d   s++++ +k+e    ++++l+++  ++ +  e+    m+ i ++ +  + +l +f +a leY+ 
  KHJ33120.1 120 CGWLESLERSLA-MMKEYQAARKKLENRRLAYDASLSKMQK-SKKEDFR-MEEELRSQKAKYEESSEDVLRRMQDIKEAeADSLADLGQFLEAELEYYD 215
                 555556666665.47889999******************88.7777766.899***********************9862568999************* PP

       BAR_2 275 kcvkkl 280
                 +c ++l
  KHJ33120.1 216 RCRDEL 221
                 **9998 PP

>> OmpH  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.37   1.3e+03      17      56 ..      19      58 ..      16      85 .. 0.72
   2 ?   11.4   9.8   8.6e-05      0.31       8      91 ..     127     211 ..     125     222 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.37
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS CS
        OmpH 17 gkaaqeqlekkfkklqaeleakekelqklqeelqkkakkl 56
                g +a++++ ++fk l++e++ + + +++l + +  + k+l
  KHJ33120.1 19 GAEAKTNVSDQFKGLETEMNLRHEGMERLHKSMTVYVKSL 58
                6788999999999999999988888888888886655555 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 8.6e-05
                 HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHTTTS.-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        OmpH   8 qkileespegkaaqeqlekkfkklqaeleakekelq...klqeelqkkakklekeekeqelqkkeqelqqkqqqkaqelqkkqqell 91 
                 ++ l+ ++e++aa+++le+ + +++a l +++k+ +   +++eel  +++k   ee  +++ +++q+++++ +    +l +  +++l
  KHJ33120.1 127 ERSLAMMKEYQAARKKLENRRLAYDASLSKMQKSKKedfRMEEELRSQKAK--YEESSEDVLRRMQDIKEAEADSLADLGQFLEAEL 211
                 566899***************999999999999887333456666544433..6677777999999999944444477777665554 PP

>> PMEI  Plant invertase/pectin methylesterase inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.83     3e+03      70      88 ..      78     108 ..      18     147 .. 0.59
   2 ?    9.6   2.3    0.0003       1.1      51     125 ..     151     224 ..     125     254 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.83
                 H............HHHHHHHHHHHHHHHHHH CS
        PMEI  70 k............aaledClelyedavdeLe 88 
                 +            + +  Cl  ++ a d++ 
  KHJ33120.1  78 QmmiqhgedfdsdSEFGRCLISMGRANDRVA 108
                 0444444444444445566666666666644 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0003
                 HHHHHHHHHHS......-HH....HHHHHHHHHHHHHHHHHHHHHHHHH-HH.....HHHHHHHHHHHHHHHHHHHHTTS CS
        PMEI  51 aaaiskllkkskkkklkkkk....aaledClelyedavdeLedalaalkrskrk.vddaqtwlsaaltdqdtCedgfkea 125
                  a +sk++ kskk+     +    + l++ +  ye++ +++ + ++++k+ +++ ++d+ + l a l++ d C+d++ + 
  KHJ33120.1 151 DASLSKMQ-KSKKE-----DfrmeEELRSQKAKYEESSEDVLRRMQDIKEAEADsLADLGQFLEAELEYYDRCRDELIRL 224
                 33334442.22222.....122347899999999999999888888888888888*********************9543 PP

>> GBP_C  Guanylate-binding protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.9       1.1     4e+03     236     265 ..      21      50 ..       5      70 .. 0.46
   2 ?   12.3   8.6   2.3e-05     0.081     174     271 ..     129     226 ..     112     270 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.1
       GBP_C 236 akeksleehvkqLkekleeereklleeqer 265
                 + + ++ ++ k L+  ++   e +++ +++
  KHJ33120.1  21 EAKTNVSDQFKGLETEMNLRHEGMERLHKS 50 
                 333333444444444443333333333222 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 2.3e-05
       GBP_C 174 aeevLqeflkskeaveeailqtdkaltakekeieaeqakaeaaeaekelleekqkeeeqrmeakeksleehvkqLkekleeereklleeqerllekkl 271
                 + ++++e+   ++++e+  l+ d +l + +k ++++   +e+++ +k+  ee+ ++  +rm++ ++   + ++ L + le+e e + +  ++l+  k+
  KHJ33120.1 129 SLAMMKEYQAARKKLENRRLAYDASLSKMQKSKKEDFRMEEELRSQKAKYEESSEDVLRRMQDIKEAEADSLADLGQFLEAELEYYDRCRDELIRLKR 226
                 56789999999***********************************************************************9999998888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1306  (0.0728429); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3126.04
//
Query:       KHJ33121.1  [L=327]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       631  (0.0351944); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2570.41
//
Query:       KHJ33122.1  [L=356]
Description: hypothetical protein EV44_g0631 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-23   81.2   8.0    1.2e-22   80.6   8.0    1.3  1  PIG-Y     Phosphatidylinositol N-acetylglucosaminyltransferas
  ------ inclusion threshold ------
      0.069   13.5   0.2        3.4    8.0   0.0    2.3  2  DUF3619   Protein of unknown function (DUF3619)
      0.099   13.2   2.7        1.2    9.7   0.3    2.3  2  DUF1218   Protein of unknown function (DUF1218)
       0.38   11.0   0.1       0.38   11.0   0.1    2.7  3  DUF2956   Protein of unknown function (DUF2956)


Domain annotation for each model (and alignments):
>> PIG-Y  Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.6   8.0   2.6e-26   1.2e-22       1      70 []     273     350 ..     273     350 .. 0.99

  Alignments for each domain:
  == domain 1  score: 80.6 bits;  conditional E-value: 2.6e-26
       PIG-Y   1 Gyallltsvllfivgmyavl..fskllrlgeaplsppvladd......ryYcylvpllipvtlvfvianWvGlKfFrh 70 
                 G++ll++++++f+vgm ++l  +s+++++ge+p++pp+l+dd      +yY  l++l+ ++++v+v + WvG+K+Frh
  KHJ33122.1 273 GWVLLFVTWIVFVVGMGSCLgvWSWAWDVGETPYAPPELEDDptlpivGYYPALIILTSVMAWVWVTVAWVGMKYFRH 350
                 9*****************************************9999999****************************9 PP

>> DUF3619  Protein of unknown function (DUF3619)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.6     0.037   1.6e+02      29      62 ..      59      92 ..      46     110 .. 0.75
   2 ?    8.0   0.0   0.00075       3.4      27      88 ..     231     288 ..     226     297 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.037
     DUF3619 29 aaAReqAlarkkpeaaaravaaalalagagaslt 62
                ++ R+ A+a ++++  ++   +++al g+ga+  
  KHJ33122.1 59 RSNRSLAVAMQQKNRRRKGSLRKTALLGRGAQRE 92
                4679999999999999999999999999999844 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00075
     DUF3619  27 RLaaAReqAlarkkpeaaaravaaalalagagasltlgeeeagswlrrlalalpllalvvgL 88 
                  L+ AR+++++++k+  +++ + ++++ a +++   ++ + +++w+  + l++++++ vvg+
  KHJ33122.1 231 ALSRARHRSVQHAKSPLSMSGLTQNPIPALESE---WDYS-ETEWWGWVLLFVTWIVFVVGM 288
                 5899*********98888888888887777755...3333.689***************998 PP

>> DUF1218  Protein of unknown function (DUF1218)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.3   0.00026       1.2      31      52 ..     269     290 ..     237     301 .. 0.80
   2 ?    3.2   0.1     0.029   1.3e+02      34      51 ..     326     343 ..     310     346 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00026
     DUF1218  31 krtlavvlfvlswivfaiAval 52 
                 + +++ vl++++wivf++++  
  KHJ33122.1 269 TEWWGWVLLFVTWIVFVVGMGS 290
                 789**************99865 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.029
     DUF1218  34 lavvlfvlswivfaiAva 51 
                 l ++ +v++w+++++A++
  KHJ33122.1 326 LIILTSVMAWVWVTVAWV 343
                 678899**********97 PP

>> DUF2956  Protein of unknown function (DUF2956)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.5       0.6   2.7e+03      42      59 ..      69      89 ..      58     117 .. 0.52
   2 ?   11.0   0.1   8.6e-05      0.38      62      99 ..     249     286 ..     230     288 .. 0.69
   3 ?   -1.2   1.7      0.54   2.4e+03      83      99 ..     331     347 ..     326     349 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.6
     DUF2956 42 qqkekaReadkarkkql....k 59
                qqk++ R+ +  rk +l     
  KHJ33122.1 69 QQKNRRRKGS-LRKTALlgrgA 89
                3444433332.22222222221 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 8.6e-05
     DUF2956  62 ekeeeeeeeeeseeetevekakllpwlLLvlsWlgfiv 99 
                  +  +++     e+e   +++++  w+LL ++W++f+v
  KHJ33122.1 249 MSGLTQNPIPALESEWDYSETEWWGWVLLFVTWIVFVV 286
                 444555555666777888999***************86 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.54
     DUF2956  83 kllpwlLLvlsWlgfiv 99 
                 ++++w+ + ++W+g+ +
  KHJ33122.1 331 SVMAWVWVTVAWVGMKY 347
                 6789*********9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2564.25
//
Query:       KHJ33123.1  [L=461]
Description: putative cation efflux family protein family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-11   44.2  16.3    2.5e-11   43.7  16.3    1.1  1  Cation_efflux  Cation efflux family


Domain annotation for each model (and alignments):
>> Cation_efflux  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.7  16.3   1.4e-15   2.5e-11       7     199 .]     161     373 ..     157     373 .. 0.72

  Alignments for each domain:
  == domain 1  score: 43.7 bits;  conditional E-value: 1.4e-15
  Cation_efflux   7 anlilalvelivgllt.nSlalladafhslsdlvsllllllalk.....lsrkppderfpfGygrlevlgalvsgllllglavfllleaiqkli.. 94 
                    +++  a+v l v++ + +Slal+a +   ++d++s ++++++ +     +  k ++ r+pfG++r+evl+++  +++ll++++ l+++++ ++i  
     KHJ33123.1 161 CCVCHAFVALYVYYSApGSLALTALSHLIFFDAISATICVIVDVlcnfeV-WKRSSIRHPFGLERAEVLAGFAMSVFLLFMGFDLISHNLRHAIen 255
                    56666777777777777999999999999999999999999999555432.255679*************************************** PP

  Cation_efflux  95 ............kegereihaglalvvalvslvvnlalllilrragrklrsaalkaaalhvlgDal.......tslgvlvsalvillfnlksg... 168
                                ++ + +  ++ a+++++++++++ ++l  + r        +l+ ++++ l  +l       t +  l+ +l+ ++         
     KHJ33123.1 256 lgshssthhpqsENRVSLSSIDSAVILSIIATLISAFGLKNHSR-----IGKTLRYSCISFLPSILsnpshflTLASSLIMLLLPIFS----Vsmy 342
                    *******5544444444445555555555555555555555555.....555555555555555554441111555555555555554....4556 PP

  Cation_efflux 169 plaDpvaslligliilysalkllkeslseLl 199
                    +++D ++  li++ ++  +++ +    ++Ll
     KHJ33123.1 343 HWIDLIFCTLIAISMFALGVHFAIAQGLILL 373
                    9*******************99999988886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       758  (0.0422779); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3455.62
//
Query:       KHJ33124.1  [L=293]
Description: putative alpha and gamma adaptin binding protein p34 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-12   48.4   2.4      2e-12   47.8   2.4    1.3  1  Adaptin_binding  Alpha and gamma adaptin binding protein p34
  ------ inclusion threshold ------
      0.035   13.7   0.2      0.076   12.6   0.2    1.5  1  Fzo_mitofusin    fzo-like conserved region
       0.06   12.9   0.3       0.18   11.4   0.1    1.8  2  Trimer_CC        Trimerisation motif
       0.19   10.6   0.0       0.31    9.9   0.0    1.4  1  Amidase          Amidase


Domain annotation for each model (and alignments):
>> Adaptin_binding  Alpha and gamma adaptin binding protein p34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8   2.4   4.5e-16     2e-12       3     120 ..     173     287 ..     171     288 .. 0.87

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 4.5e-16
  Adaptin_binding   3 qGieRirEaLethmWsg.lelkkqtaslsnrnaslet...........eadeaqlekeeeeqdpsqpastepdksaaesesadaeflfggdeaa 84 
                       G++R++EaL++++W++  el + ++++++ +    +           ea +  +e++e++  + q++   + ks+a+s+            + 
       KHJ33124.1 173 MGLDRLKEALQSNDWENnYELGDYDNDIEELD----EfdvgdfsgfkiEAAQVGKEMQEMRIGICQNQGSTEMKSEASSNY-----------EE 251
                      69*************98678877655444444....35666****************************999999888885...........68 PP

  Adaptin_binding  85 rledlesllsklqqakdnvrnlpdeeRkkeAakval 120
                      ++e+le ++sk++ ++d+++ lp++e+k++ ak++ 
       KHJ33124.1 252 EVEKLEAIVSKINLIRDSTADLPNAEKKRMVAKLVS 287
                      9********************************985 PP

>> Fzo_mitofusin  fzo-like conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   1.7e-05     0.076      93     148 ..     219     273 ..     212     280 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.7e-05
  Fzo_mitofusin  93 hqvqqelsstfarlcqqvdetekeleee.ikelekeiekleevqkkakllrnkasll 148
                     qv +e++++   +cq+   t  e+++e  ++ e+e+ekle++ +k +l+r+ +  l
     KHJ33124.1 219 AQVGKEMQEMRIGICQNQGST--EMKSEaSSNYEEEVEKLEAIVSKINLIRDSTADL 273
                    69**************86655..55555156899*****************988776 PP

>> Trimer_CC  Trimerisation motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       0.6   2.7e+03      42      50 ..     175     183 ..     174     184 .. 0.85
   2 ?   11.4   0.1   4.1e-05      0.18      13      36 ..     238     261 ..     232     264 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.6
                 HHHHHHHHH CS
   Trimer_CC  42 LDrLEetvq 50 
                 LDrL e+ q
  KHJ33124.1 175 LDRLKEALQ 183
                 89**99887 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 4.1e-05
                 XXXXXXXX--HHHHHHHHHHHHHH CS
   Trimer_CC  13 sgtpssdavSRLEEelrkLqatVQ 36 
                 s+  +s+a S  EEe+ kL a+V 
  KHJ33124.1 238 STEMKSEASSNYEEEVEKLEAIVS 261
                 666689****************96 PP

>> Amidase  Amidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0     7e-05      0.31     228     269 ..     218     259 ..     197     282 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 7e-05
                 HHCTT---TT-EEEEEGGGCSS---CCHHHHHHHHHHHHHCT CS
     Amidase 228 aeelkkslkglriGvvkedgvasldpevqravekalkaLeea 269
                 a++++k+ +++riG+ +++g ++++ e   ++e+ +++Le+ 
  KHJ33124.1 218 AAQVGKEMQEMRIGICQNQGSTEMKSEASSNYEEEVEKLEAI 259
                 57889999*******************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       808  (0.0450667); expected 358.6 (0.02)
Passed bias filter:                      565  (0.0315132); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2122.36
//
Query:       KHJ33125.1  [L=158]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0072   16.4   0.2     0.0072   16.4   0.2    1.9  2  ArfGap        Putative GTPase activating protein for Arf
  ------ inclusion threshold ------
       0.85    9.2   7.1       0.17   11.4   1.8    2.2  2  TF_Zn_Ribbon  TFIIB zinc-binding
        1.6    9.1  10.4          4    7.8   2.0    2.5  2  eIF3g         Eukaryotic translation initiation factor 3 subu


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.8      0.24   1.4e+03      35      43 ..      64      72 ..      58      80 .. 0.80
   2 !   16.4   0.2   1.2e-06    0.0072      15      86 ..      82     151 ..      73     157 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.24
                E-HHHHHHH CS
      ArfGap 35 lCieCsgvH 43
                 C +C g H
  KHJ33125.1 64 FCKRCNGHH 72
                699999998 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 1.2e-06
                 B-TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC- CS
      ArfGap  15 vCaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklp 86 
                  C +Cg+++ +   ++++++ C +C g Hrs  ++    r ++l + ++e++++ ++ g+++++++l a+  
  KHJ33125.1  82 SCGNCGSTN-HLEDISMATTKCRNCRGPHRSD-SRRCLARPTRLGTPTKEQMKTYRQAGEREFQAVLRARAA 151
                 699998877.46788999999**********8.677789***************************999875 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.3      0.12     7e+02       3       8 ..      65      70 ..      63      74 .. 0.66
   2 ?   11.4   1.8   2.8e-05      0.17       3      27 ..      83     108 ..      81     113 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.12
                  ETTTTC CS
  TF_Zn_Ribbon  3 CPnCgs 8 
                  C+ C++
    KHJ33125.1 65 CKRCNG 70
                  666665 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 2.8e-05
                   ETTTTCEECHEETSTTCEEESSS.SB CS
  TF_Zn_Ribbon   3 CPnCgstnlveDpergelvCtdC.Gl 27 
                   C nCgstn +eD + +++ C +C G+
    KHJ33125.1  83 CGNCGSTNHLEDISMATTKCRNCrGP 108
                   99*********************886 PP

>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   2.0   0.00067         4      94     120 ..      53      78 ..      21      83 .. 0.79
   2 ?    5.7   1.9    0.0031        18     101     114 ..      96     109 ..      78     119 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00067
       eIF3g  94 kaklkkkekklvkCriCkgdHfTskCP 120
                 ++  k k++ +  C+ C+g+H T +C 
  KHJ33125.1  53 ARPFK-KQQPIEFCKRCNGHHPTKNCS 78 
                 44555.4577789*************5 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0031
       eIF3g 101 ekklvkCriCkgdH 114
                 +  + kCr+C+g H
  KHJ33125.1  96 SMATTKCRNCRGPH 109
                 334589******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       750  (0.0418317); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.20s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1220.19
//
Query:       KHJ33126.1  [L=204]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1661.66
//
Query:       KHJ33127.1  [L=203]
Description: putative 40s ribosomal protein s8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-53  179.6   0.6    3.7e-53  179.4   0.6    1.0  1  Ribosomal_S8e  Ribosomal protein S8e


Domain annotation for each model (and alignments):
>> Ribosomal_S8e  Ribosomal protein S8e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.4   0.6   2.1e-57   3.7e-53       1     137 []       1     189 [.       1     189 [. 1.00

  Alignments for each domain:
  == domain 1  score: 179.4 bits;  conditional E-value: 2.1e-57
                    XXXBXXCCCSEESSTEEXXXSSXXXCCSBXXXXXXXEESSHEEEEEEETTCEEEEEEESESEEEEEETTTTEEEEEEEEEEECSSSTCHHHHTTC- CS
  Ribosomal_S8e   1 mgisrdskhkrkltGgkakllrkkrkielgrkekatklgaervkvvrvrgGkrkkralrlkkanvthpeekvtkklkIlgVkknpsnneyvrlgvl 96 
                    mgisrds+hkr+++G+k++ +rkkr++e gr+e++t++g +rv+ vr+rgG+rk+ralrl+++n+++++e++++k++++ V  +psnne+vr+++l
     KHJ33127.1   1 MGISRDSRHKRSASGAKRSYYRKKRAFEAGRQESNTRIGPKRVHLVRTRGGNRKFRALRLDSGNFSWASEGISRKVRVIVVAFHPSNNELVRTNTL 96 
                    99********************************************************************************************** PP

                    -TTEEEEEESHH....................................................HHHHHHTTEEEEEEESEHHHHSSEEEEEE CS
  Ribosomal_S8e  97 tKgaiievdvse....................................................LgevtqsgkvvAqvtsrPgqdGcvnavlL 137
                    tK+a+++vd+++                                                    L++++++g+++A+v+srPgq+G++++++L
     KHJ33127.1  97 TKSAVVQVDAAPfrqwyeahygqnlgrrrqqkagqevaapekksnsvekkhnerftklgkiepaLEKQFEAGRLFAVVASRPGQSGRCDGYIL 189
                    ********************************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.18s 00:00:00.58 Elapsed: 00:00:00.33
# Mc/sec: 1832.33
//
Query:       KHJ33128.1  [L=708]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.3e-99  331.3   0.4    6.9e-99  330.6   0.4    1.3  1  ABC_membrane_2  ABC transporter transmembrane region 2
    2.4e-17   63.7   0.0    5.1e-17   62.7   0.0    1.6  1  ABC_tran        ABC transporter
    0.00021   21.2   0.0     0.0021   17.9   0.0    2.4  2  AAA_21          AAA domain, putative AbiEii toxin, Type IV TA
  ------ inclusion threshold ------
      0.024   15.1   0.1       0.34   11.4   0.0    2.2  2  AAA_23          AAA domain
       0.17   11.6   0.0       0.39   10.5   0.0    1.5  1  AAA_29          P-loop containing region of AAA domain
        0.4   11.1   2.4       0.51   10.7   0.1    2.3  3  AAA_16          AAA ATPase domain


Domain annotation for each model (and alignments):
>> ABC_membrane_2  ABC transporter transmembrane region 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  330.6   0.4  2.3e-102   6.9e-99       1     269 []      98     366 ..      98     366 .. 1.00

  Alignments for each domain:
  == domain 1  score: 330.6 bits;  conditional E-value: 2.3e-102
  ABC_membrane_2   1 LlkilipklkskeallllvlllllvlrtllsvlvaqldgklvkalvaknvraFvlsllkfallavpasfvnsalkYltqkLalafRkrLtkhlls 95 
                     Llki++p+++ske++ll+ ++lll++rtl+s+ va +dg+lv++l++++ r+F+l +++++l+a+pa+++ns+l+Y+++kL+l++R+rLt+h+++
      KHJ33128.1  98 LLKICVPGWRSKELRLLINHSLLLLIRTLISLKVAAMDGALVSCLIRGKGRDFLLGIIWWMLIAIPATITNSMLSYHQCKLSLQYRTRLTNHIHD 192
                     89********************************************************************************************* PP

  ABC_membrane_2  96 eYlknrtyYkvsnlderidnpDqritqDvekFtsslssLlsglvkpildvilftfiLwslsgtlgllllllyvllatvilriigpplgklvaeee 190
                     +Yl+n+t+Y++s+ld+ri+n Dq+it Dv++F++sl++L+ +l+kp ld++++t+iL +++g +gl+++ l v l+++++r+++pp+gk+va+e+
      KHJ33128.1 193 KYLSNMTFYSLSALDDRIKNTDQLITVDVSNFSKSLAELYGNLAKPTLDMLIYTYILSKNVGGEGLFFMSLLVQLSANLMRALTPPFGKYVADEA 287
                     *********************************************************************************************** PP

  ABC_membrane_2 191 klegefRylhsrlitnaEeIAFyrGeevEkkqlqrrfkslidnlrrilsrrlrlgiieafvlkYlasilgyvlvalpif 269
                     +legefR++hsr+ ++ EeIA+y+G+evEk++l++ + +li+++++il+rr+++g++e+f++kY++++lg+vl+++p+f
      KHJ33128.1 288 RLEGEFRFEHSRIVDYGEEIALYNGHEVEKDTLDKGYFTLIKHVNYILRRRFTHGFMEDFIIKYIWGALGLVLCSVPVF 366
                     *****************************************************************************98 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.7   0.0   1.7e-20   5.1e-17       2     137 .]     479     622 ..     478     622 .. 0.87

  Alignments for each domain:
  == domain 1  score: 62.7 bits;  conditional E-value: 1.7e-20
                 EEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH..............HHHTCHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxx RF
    ABC_tran   2 knvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren..............esdeeie 86 
                 + +s+++k+g+ + ++G+nG+GKS+L+++l gl     G++           ++   +++ ++pq p l  ++ +r++                d+++ 
  KHJ33128.1 479 QALSFTMKPGTHLLVLGPNGCGKSSLFRILGGLWPVYGGKV-----------RKPPLSQVFYVPQRPYLSAGT-LRQQiiypdshldmrrkgITDADLL 565
                 679**************************************...........788888999999999988888.7777898888887777787888899 PP

                 HHHHHSTTGGTTCBGESTTS......GGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  87 kalsklglkelkdtvvkssp......ssLSgGqkqrvalarallkkpkllllDEpta 137
                 +++s l+l++l ++ v+  +        LS G +qrva+ar++ ++pk  +lDE+t+
  KHJ33128.1 566 NIMSILDLNHLVENFVQGWDteaewrDILSVGLQQRVAMARLFYNRPKYAILDECTS 622
                 9999999999777776433356677799***************************96 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0       0.2     6e+02     164     218 ..     380     444 ..     278     462 .. 0.59
   2 !   17.9   0.0   7.1e-07    0.0021       4      50 ..     493     527 ..     491     558 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.2
      AAA_21 164 e..........rigllnifadyfgfakekrllqrlvrslklveielsdlgegeeliasvderlre 218
                 +            +  ++f++ ++ +ke++ l ++++++ +     sd++ g  + ++v++ + +
  KHJ33128.1 380 RtesfvtnrrlLLSSSDAFGRVMFSYKEITELAGYTSRVATLLKVMSDIKSGHFEKTLVSDSNSD 444
                 33333333333455667777777777777777777777777777777777777666666666555 PP

  == domain 2  score: 17.9 bits;  conditional E-value: 7.1e-07
      AAA_21   4 liGpNgsGKSnLLdaldllarldrdvegltdelsggggirkipslld 50 
                 + GpNg+GKS+L+++l +l+            +  gg+ rk p ++ 
  KHJ33128.1 493 VLGPNGCGKSSLFRILGGLW------------PVYGGKVRKPPLSQV 527
                 78**************9995............445555555555544 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00012      0.34      23      39 ..     492     508 ..     477     543 .. 0.88
   2 ?    1.2   0.1      0.15   4.4e+02     117     162 ..     652     695 ..     572     708 .] 0.60

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00012
      AAA_23  23 lItGpNGaGKTTildAi 39 
                 l+ GpNG+GK+++++ +
  KHJ33128.1 492 LVLGPNGCGKSSLFRIL 508
                 788**********9865 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.15
      AAA_23 117 leqfisellgskkiilnlilflgqer........feefelkdkkerleelekel 162
                 l+++ s+l          ++f gq++        +++++l+d+k++le   ++ 
  KHJ33128.1 652 LWKYHSKL----------LQFDGQGSyvftqldaEKRLQLEDEKDELEMRLRQV 695
                 44444444..........333333333333333355555555555443322222 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00013      0.39      17      39 ..     483     505 ..     477     506 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00013
      AAA_29  17 ieidlkgatlltGpsGsGKSTll 39 
                 +++++    l+ Gp+G GKS+l+
  KHJ33128.1 483 FTMKPGTHLLVLGPNGCGKSSLF 505
                 5666666899**********996 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0         2   5.9e+03      74     106 ..      36      63 ..      19     129 .. 0.50
   2 ?   10.7   0.1   0.00017      0.51      21      42 ..     486     506 ..     475     509 .. 0.76
   3 ?   -2.0   0.1       1.4   4.1e+03      81     115 ..     669     702 ..     666     705 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2
      AAA_16  74 qalareellrqlldeaesaeleawrekleeala 106
                 +++ + +l+ +ll++     ++a +e+ e+al+
  KHJ33128.1  36 RTIYF-TLFLALLNR----IHAAVSEQKEAALS 63 
                 44433.455555544....22222222222222 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00017
      AAA_16  21 sgrpelvllsGesGvGKsslvr 42 
                 +++   +l+ G+ G+GKssl r
  KHJ33128.1 486 KPG-THLLVLGPNGCGKSSLFR 506
                 444.799************976 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 1.4
      AAA_16  81 llrqlldeaesaeleawrekleealaavpelagae 115
                 +++ql++e++  +le+ +++le +l++vpe+++ +
  KHJ33128.1 669 VFTQLDAEKRL-QLEDEKDELEMRLRQVPEIERRI 702
                 57788888666.99999999999999999887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (708 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.61u 0.31s 00:00:00.92 Elapsed: 00:00:00.42
# Mc/sec: 5071.10
//
Query:       KHJ33129.1  [L=455]
Description: putative fructose-bisphosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.7e-79  264.1   0.2    1.1e-78  263.7   0.2    1.1  1  6PF2K         6-phosphofructo-2-kinase
    1.3e-35  122.9   0.0    2.2e-35  122.1   0.0    1.4  1  His_Phos_1    Histidine phosphatase superfamily (branch 1)
    4.1e-05   23.8   0.0    7.5e-05   22.9   0.0    1.4  1  AAA_33        AAA domain
  ------ inclusion threshold ------
      0.012   15.4   0.0      0.029   14.2   0.0    1.7  1  Adeno_E3_CR1  Adenovirus E3 region protein CR1
      0.068   12.6   0.0       0.19   11.2   0.0    1.6  1  KTI12         Chromatin associated protein KTI12


Domain annotation for each model (and alignments):
>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  263.7   0.2   2.9e-82   1.1e-78       5     222 ..      16     230 ..      12     231 .. 0.97

  Alignments for each domain:
  == domain 1  score: 263.7 bits;  conditional E-value: 2.9e-82
                 HHHHT..S-EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHHHHHHSS---GGGGSTT-HHHHHHHHHHHHHHHHHHHHHHHTS--SEEEEE CS
       6PF2K   5 tvtnlknsklvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgkyrreaskalsdaeffrpdneealklreklalaalkdllaylneeegqvaifD 103
                 +++n +++++++v+vGLpargK++i++k +ryl+wl+++tkvFnvg yrr+ + +   a+ff+ +n+e+ +lr+ +a +a+k++l++++ e+g ++i D
  KHJ33129.1  16 SMSNVEDTQICVVMVGLPARGKSLIAQKACRYLRWLSINTKVFNVGYYRRKQAAK-PPASFFDVNNPEGERLRRAAAEEAVKEMLQWFK-EGGIIGILD 112
                 678999********************************************98877.6799****************************9.99******* PP

                 S---SHHHHHHHHHHHHHTT-EEEEEEEE--HHHHHHHHHHHHTTTSGGGTTS-HHHHHHHHHHHHHHHHTT-----TTTTTTSEEEEEETTTTEEEEE CS
       6PF2K 104 AtNttrerRklilefveennlkvlflesicsdeeiikeNikevklsspDYkdketeeaikdflkRlenyekqyeplddeedeelsyIkvidvgkslvvn 202
                 AtN+++ rRk+i+e + e+n+++lf+es c+d+++i +Ni evk+sspDY ++++eea  df  R++nyek+ye +  +++++l+y+k+++vg+++++n
  KHJ33129.1 113 ATNSSISRRKWIKEKCDEQNVETLFVESKCDDQDLILSNILEVKTSSPDYDGQDPEEAARDFCDRISNYEKVYETIG-DQEKHLTYLKIMNVGSQVIIN 210
                 ****************************************************************************9.7899***************** PP

                 ---SHHHHHHHHHHTT---S CS
       6PF2K 203 nvqgylqsrivyyllNihlk 222
                  +q+ylqsr+vyyl+N+h k
  KHJ33129.1 211 AIQDYLQSRVVYYLMNLHIK 230
                 *****************976 PP

>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.1   0.0   6.2e-39   2.2e-35       1     191 [.     234     422 ..     234     425 .. 0.91

  Alignments for each domain:
  == domain 1  score: 122.1 bits;  conditional E-value: 6.2e-39
                 EEEEE---BTTB--....TT----B-HHHHHHHHHHHHHHTT.....S---EEEE-SSHHHHHHHHHHHHCTT--EEE-GGGS----GGGTT-B.HHHH CS
  His_Phos_1   1 lyLvRHGetewnaegrlqgrtdvpLteeGreqAealaerlag.....epidaiysSplkRarqTaeliaealglpveldegLrEidfGdweglttaeia 94 
                 ++L RHGe+ wn+ g+++g  d++L+++G+e A+ l e +++      ++  +++S+lkR++ Ta+++      +  ++++L+E+d G+++++t+aei+
  KHJ33129.1 234 IWLSRHGESVWNVLGKIGG--DADLSPRGEEYARLLPELVNKslrgeSRPLNVWTSTLKRTIATARHLPSY--FNQLQWKALDELDSGVCDNMTYAEIK 328
                 89************96665..888***********999855544325556666***************987..558899******************** PP

                 HH..HSHHHHHHHHH-GGG-BS-BHHHHHHHHHHHHHHHHHHTTTSEEEEEE-HHHHHHHHHHHHT--GGGGGGB---TT-EEEEEE-SS-EEEEEE CS
  His_Phos_1  95 eeypeeleawlrdpadvrppggEsledvaaRvaaaleelaarhegetvlvVsHggvirallarllglpleelrrleldnaslsvlefdeggwrlvrl 191
                 e+ype++ea+++d++++r+ ggEs++dv+ R+++++ el+++++   +l+V+H++++r+++a+l++ +  + + ++++ ++l +++ ++ g++++ +
  KHJ33129.1 329 EKYPEDFEARDHDKYNYRYRGGESYRDVVIRLEPIIMELERSEN---ILIVTHQAILRCIYAYLMDKDHVKSPWMNVPLHTLIKITPKAYGCEVEMF 422
                 ***************************************99986...******************************************99999876 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   2.1e-08   7.5e-05       2     109 ..      27     145 ..      26     157 .. 0.80

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 2.1e-08
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdt.....lrrrlfg......tdqqsktdytrvldrlyqilnelarkalsagrnvildatnlsrrerarfl 89 
                 v++vGlp+ GKs  a++ ++ l +  +++ +     +rr+ ++       d+++++     +  + + ++e+++   + g+  ildatn s ++r+++ 
  KHJ33129.1  27 VVMVGLPARGKSLIAQKACRYLRWLSINTKVfnvgyYRRKQAAkppasfFDVNNPEGERLRRAAAEEAVKEMLQWFKEGGIIGILDATNSSISRRKWIK 125
                 89*********************99999999666643332222345555444444443445567889999***999999999***************** PP

      AAA_33  90 klarrlgvpvrivvvetdee 109
                 +   +++v+ + v  ++d++
  KHJ33129.1 126 EKCDEQNVETLFVESKCDDQ 145
                 ********999999999876 PP

>> Adeno_E3_CR1  Adenovirus E3 region protein CR1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0     8e-06     0.029      34      71 ..     119     156 ..      93     175 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 8e-06
  Adeno_E3_CR1  34 eedgdlkklCegekkkteeikvsCnkqnLtLlnvtkty 71 
                   ++ ++ k+ C++++++t  ++ +C++q+L+L n+ + +
    KHJ33129.1 119 SRRKWIKEKCDEQNVETLFVESKCDDQDLILSNILEVK 156
                   678899***********9999***********996433 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   5.2e-05      0.19       4      86 ..      27     121 ..      26     165 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.2e-05
                 EEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH.........TTSSS--GGGHHHHHHHHHHHHHHHHTT.S....EEEE-S---SHHHH CS
       KTI12   4 vvltGlPssGKstrakeLakaleeekrsvvviddeslg........iekdsykdsakekalRsslrsavkrdLskek....vVIvDslnyikgfR 86 
                 vv+ GlP+ GKs +a++  ++l+   ++  v +   ++         +  ++++ + e+  R++  +avk+ L+  k    + I+D++n   + R
  KHJ33129.1  27 VVMVGLPARGKSLIAQKACRYLRWLSINTKVFNVGYYRrkqaakppASFFDVNNPEGERLRRAAAEEAVKEMLQWFKeggiIGILDATNSSISRR 121
                 89*********************955555555555554443334555566688999999999999999999997432222256788888766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (455 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       533  (0.0297284); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3416.16
//
Query:       KHJ33130.1  [L=417]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (417 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3052.44
//
Query:       KHJ33131.1  [L=776]
Description: putative actin cytoskeleton organization protein app1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-28   99.5   0.0    3.5e-28   97.8   0.0    2.0  1  DUF2183   Uncharacterized conserved protein (DUF2183)


Domain annotation for each model (and alignments):
>> DUF2183  Uncharacterized conserved protein (DUF2183)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.8   0.0     2e-32   3.5e-28       1      99 []     372     468 ..     372     468 .. 0.97

  Alignments for each domain:
  == domain 1  score: 97.8 bits;  conditional E-value: 2e-32
     DUF2183   1 ffYvSaspwnlyplleeFleenglPkgslllrdlsltlksllkekstaehKraeiekiletfperkfiliGDsgqkdpeiYaeiakefpeqikaiyIRd 99 
                 ++YvS+spw+l+p+l +F++ ++lP gs++l++++  l+++l+   ++e+K+ +i kil++fp+r+fil+GDs+++d+e+Y +i+ ++p++i +++IRd
  KHJ33131.1 372 IHYVSNSPWQLFPTLLHFFKGAELPFGSYHLKSYTGMLQGILE--PASERKKPTIMKILSDFPDRSFILVGDSSEADLEVYCDIVLANPGRIMMVLIRD 468
                 69*********************************88899997..589**************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (776 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1164  (0.0649228); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.26s 00:00:00.91 Elapsed: 00:00:00.43
# Mc/sec: 5452.54
//
Query:       KHJ33132.1  [L=342]
Description: putative pre-mrna-splicing factor 18 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.4e-53  178.3   0.0    8.4e-53  178.3   0.0    2.3  2  Prp18            Prp18 domain
    3.2e-12   45.8   0.7    3.2e-12   45.8   0.7    2.2  2  PRP4             pre-mRNA processing factor 4 (PRP4) like
  ------ inclusion threshold ------
      0.089   13.2   2.4       0.18   12.3   2.4    1.5  1  DUF1963          Domain of unknown function (DUF1963)
          4    7.2  18.3        8.5    6.1  18.3    1.6  1  Selenoprotein_S  Selenoprotein S (SelS)


Domain annotation for each model (and alignments):
>> Prp18  Prp18 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   3.8      0.54   2.4e+03      24      58 ..      59      93 ..      30     132 .. 0.70
   2 !  178.3   0.0   1.9e-56   8.4e-53       2     142 ..     196     333 ..     195     334 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.54
       Prp18 24 ksvegkkesatlkqtkedlkpLlkklkkkkleedi 58
                k +++++e++ ++  ke+ ++L ++ +++k+e++ 
  KHJ33132.1 59 KRKREEEEAKLVQRRKEKQRKLAEESRQQKIEREA 93
                22244455555666666667777777777776654 PP

  == domain 2  score: 178.3 bits;  conditional E-value: 1.9e-56
       Prp18   2 sflkkllkewekeleerseeekksvegkkesatlkqtkedlkpLlkklkkkkleedileklveivkalqkreyvkAndaYlklaIGnaaWPiGVtmvgi 100
                 s+++++++ewe++l+++++   +++++k+++++++q++e++ pL++k++k +l+++ile +veivka+q+r+yv+And Yl+l+IG+aaWPiGVtmvgi
  KHJ33132.1 196 SYFTMVMTEWESALNKEKR---DTFASKAAHNAMHQSRESMVPLFRKFEKGDLDDSILEPIVEIVKAAQDRRYVDANDGYLRLSIGKAAWPIGVTMVGI 291
                 799************9855...58999************************************************************************ PP

       Prp18 101 hersarekisskkvahvlndettRkyiqalkRlltfaqkkyp 142
                 hersarek++++++ hv+ de tRk++q++kR+l+faq ++p
  KHJ33132.1 292 HERSAREKLHESDKGHVMGDEITRKFLQSIKRCLSFAQVRWP 333
                 ****************************************98 PP

>> PRP4  pre-mRNA processing factor 4 (PRP4) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   1.7       1.4   6.4e+03      21      26 ..      98     103 ..      96     103 .. 0.81
   2 !   45.8   0.7   7.1e-16   3.2e-12       3      29 .]     128     154 ..     127     154 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.4
        PRP4  21 dRreRL 26 
                  Rr+RL
  KHJ33132.1  98 NRRKRL 103
                 59***8 PP

  == domain 2  score: 45.8 bits;  conditional E-value: 7.1e-16
        PRP4   3 rrLRelGEPitLFGEthadRreRLrkL 29 
                 ++LR++GEPi LFGE+h++R++R +kL
  KHJ33132.1 128 QKLRQMGEPIKLFGESHKQRLRRFHKL 154
                 79**********************998 PP

>> DUF1963  Domain of unknown function (DUF1963)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.4     4e-05      0.18      84     173 ..      37     128 ..      11     149 .. 0.55

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 4e-05
                 B-S-EEEEE.EE.EEE---TT.STTHHHHHTS-HHHHHHGGGG......GHHHHHHHHHHT..--SSEEES----SS--S-TT......TTTT-EEEEE CS
     DUF1963  84 ledefklsf.el.eeekislp.dyrfeellleeleeeeeeeae......eleeeyleeyeeeseeghklgGypeftqedpreaaeeekeqesdwtlLlq 173
                  +++++ ++ e+ ++ k +l  + + ee+ ++ ++  +e   +      e  ++ +e  ++e++++ k +G p+++qed+ +    e+++ sd + L+q
  KHJ33132.1  37 RQKQYAAEQrEIeAKRKAKLLeKRKREEEEAKLVQRRKE---KqrklaeESRQQKIEREAAEERNRRKRLGLPDLVQEDKQKI---EENDISD-EELFQ 128
                 344444444333322222222123333333333333333...13446664444555555557999999**********99998...2222222.23333 PP

>> Selenoprotein_S  Selenoprotein S (SelS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1  18.3    0.0019       8.5      64     121 ..      35      91 ..      23     125 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0019
  Selenoprotein_S  64 resdksaaaldpdvvvkrqealeaaRlrmqeeldakaekfkekkkqleeekRrqkiem 121
                       e +k+ aa + + ++kr+ +l   R+r  ee  + +++ kek+++l ee R+qkie 
       KHJ33132.1  35 SERQKQYAAEQREIEAKRKAKLLEKRKRE-EEEAKLVQRRKEKQRKLAEESRQQKIER 91 
                      33444555567788899999998888775.4445679999****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2229  (0.124324); expected 358.6 (0.02)
Passed bias filter:                      560  (0.0312343); expected 358.6 (0.02)
Passed Vit filter:                        83  (0.00462937); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 2362.18
//
Query:       KHJ33133.1  [L=789]
Description: putative pentatricopeptide repeat domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (789 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       839  (0.0467957); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 5643.01
//
Query:       KHJ33134.1  [L=160]
Description: putative duf866-domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-60  204.0   0.0    1.2e-60  203.9   0.0    1.0  1  DUF866          Eukaryotic protein of unknown function (DUF86
  ------ inclusion threshold ------
       0.09   12.7   0.9        3.3    7.7   0.0    2.2  2  Zn_ribbon_SprT  SprT-like zinc ribbon domain


Domain annotation for each model (and alignments):
>> DUF866  Eukaryotic protein of unknown function (DUF866)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.9   0.0   1.4e-64   1.2e-60       2     154 ..       4     157 ..       3     158 .. 0.98

  Alignments for each domain:
  == domain 1  score: 203.9 bits;  conditional E-value: 1.4e-64
                 EEEEEEEESEEEEE--T....T--EEEEEEETTSS.-EEEEEEE-TT-BEE-TTSS-EESEEE--SSSS--EEEEEE-.-TTTTEEEGGTS-EEEEEEE CS
      DUF866   2 Lqikaelenvtslepad.eeedfeytfkvkctsCreehpkevsisreekveisgsrgeanfvvkcklckressisikketeksytaedsgkfktilefd 99 
                 ++++ael++vt+l+p+d +  +f+ytf++kctsCr +hp+++ isr+e++ ++g+rgeanfv+kck+ckress++i++ ++k+y++e+++k ++ilefd
  KHJ33134.1   4 VYLTAELNGVTDLRPRDdSGFSFWYTFRIKCTSCRDIHPNPIGISRFESKVMKGGRGEANFVWKCKSCKRESSATIIA-APKAYQQESKTKRQKILEFD 101
                 6899*************9999*********************************************************.99****************** PP

                 EESEEEEEE---S-EEEEET.TS-EEEEE--TS.-EEEEETTTTEEEEEEEEEEEE CS
      DUF866 100 crGlelvefkpeggwkvesa.sgtkfedvdLsegeWydYdekageeVsitelevei 154
                  rGlel+ef peg+w ++++ sgt+f+++dLsegeW+dYde +geeVsi +l+++i
  KHJ33134.1 102 IRGLELIEFIPEGEWLANGIsSGTQFASIDLSEGEWFDYDESSGEEVSIVDLKWDI 157
                 ******************************************************98 PP

>> Zn_ribbon_SprT  SprT-like zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.2     0.008        72       2      15 ..      29      39 ..      26      43 .. 0.75
   2 ?    7.7   0.0   0.00036       3.3       2      16 ..      63      77 ..      62      81 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.008
  Zn_ribbon_SprT  2 kyvYrCtgCgreyt 15
                    ++  +Ct+C+   +
      KHJ33134.1 29 TFRIKCTSCR---D 39
                    55568****9...4 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00036
  Zn_ribbon_SprT  2 kyvYrCtgCgreyth 16
                     +v++C +C+re+ +
      KHJ33134.1 63 NFVWKCKSCKRESSA 77
                    69********99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1236.58
//
Query:       KHJ33135.1  [L=779]
Description: putative transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-05   23.2   0.0    0.00013   21.9   0.0    1.7  1  PAS       PAS fold
     0.0085   16.2   8.5     0.0085   16.2   8.5    1.9  2  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> PAS  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   1.5e-08   0.00013       2      81 ..     534     608 ..     534     625 .. 0.84

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 1.5e-08
                 HHHHHHHHSSSEEEEEETTSBEEEECHHHHHHHSSTHHHCTTSBGGGGBSTTHHHHHHHHHHHHHHHTT-ECCCCEEEEC CS
         PAS   2 dlraileslpdpifvvDedgrilyvNaaaeellGlsreevlgkslldliheeddaelaelleqlleqgeesrageisfkl 81 
                 ++++++++  +p++v ++ g+i+ vN++++ ++G++ + +lgk  +  i++      ++ + +  e+++ +++ +++f  
  KHJ33135.1 534 EYESFMHHCCTPTLVCRRTGEITAVNQEFTMMTGWRKDVLLGKEPNLNINT-----GKSTVVKTSEHASGATTRRVTFVA 608
                 5889999999************************************99987.....677777777777777777777766 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   8.5   9.4e-07    0.0085       1      31 [.     115     146 ..     115     155 .. 0.86
   2 ?   -3.5   0.1       1.3   1.2e+04      26      36 ..     678     687 ..     676     689 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 9.4e-07
                 SS-HHHHHCT---STSSSS-HHHHHCT..HHHC CS
     Zn_clus   1 haCdnCrkkKvKCdakkPaCsnCkkln..leCt 31 
                 +aC  C + +  C  ++P C++C+k++    C+
  KHJ33135.1 115 RACYACQRAHLTCGDERP-CQRCIKRGlaDVCQ 146
                 59****************.********766676 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.3
                 CTHHHCCCCTC CS
     Zn_clus  26 lnleCtfyses 36 
                 +++eC+ +++s
  KHJ33135.1 678 NEKECE-NENS 687
                 568898.7665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (779 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       850  (0.0474092); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.42
# Mc/sec: 5529.94
//
Query:       KHJ33136.1  [L=372]
Description: putative eukaryotic protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   5.5e-128  426.4   1.2   6.8e-128  426.1   1.2    1.1  1  Q_salvage    Potential Queuosine, Q, salvage protein family
  ------ inclusion threshold ------
      0.055   13.4   0.5       0.15   12.1   0.0    1.8  2  SoDot-IcmSS  Substrate of the Dot/Icm secretion system, putat


Domain annotation for each model (and alignments):
>> Q_salvage  Potential Queuosine, Q, salvage protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  426.1   1.2  7.6e-132  6.8e-128       1     282 []      86     372 .]      86     372 .] 0.98

  Alignments for each domain:
  == domain 1  score: 426.1 bits;  conditional E-value: 7.6e-132
   Q_salvage   1 lhpkkakestvdfifvvdlLNFsFWsekeeeerfaveykgkkytgYwsLvaalkraleegipitdpeflskete...eelkkvfrsateeeiplleeRl 96 
                 lhpk+++e+tvdfif++dlLNFsFWse+++eerf+++yk++++tgYwsLvaal+ralee+ipit+p+f+ +e+e   + lk vfrsat eeipl++eR+
  KHJ33136.1  86 LHPKAKDETTVDFIFTMDLLNFSFWSENTSEERFSIKYKDQNWTGYWSLVAALQRALEENIPITSPKFWVNEDEctdKILKYVFRSATPEEIPLFQERI 184
                 79**999******************************************************************999899******************** PP

   Q_salvage  97 ellreagkvllekfdgsfvnlikkanksaakLvnlvveefpsFrDeavyegkkvrlyKRAqilvaDlwaafegeglgefedidkltmfADyrvpqvLrq 195
                 ++lr+agk+l+ekf+gsf+ ++k an+sa++Lvnl++++fp+F+D+ ++e++++r++KRAqi+vaDlwaaf+ge +gef+di++lt+fADyr+pq+L++
  KHJ33136.1 185 NILRQAGKILTEKFNGSFLGCVKVANNSAVRLVNLLASNFPCFNDVFNFEERRIRFLKRAQICVADLWAAFDGEYYGEFHDIEQLTIFADYRIPQILNT 283
                 *************************************************************************************************** PP

   Q_salvage 196 lgvLeyseeLekklkekellesgseeeveiRacsiwavelireeiekkkeeakekvnailiDffLwdlakeleke.e...iphhrtrsiyY 282
                 lg+L+ys++Le+++++k+l+esg+ +e++iR+csiw+veli +ei ++++e k  vn+i++DffL+dl k++ek+ +   +phhrtrsi+Y
  KHJ33136.1 284 LGCLSYSPPLENTIRSKKLIESGHMWEIQIRGCSIWCVELIIKEILRHHSEFK--VNSIMVDFFLYDLIKNWEKTdQrinLPHHRTRSIWY 372
                 *************************************************9988..***************9999862566*********** PP

>> SoDot-IcmSS  Substrate of the Dot/Icm secretion system, putative
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.6e-05      0.15      44      98 ..      17      72 ..       9     107 .. 0.88
   2 ?   -1.8   0.1       0.3   2.6e+03     142     169 ..     332     359 ..     324     363 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.6e-05
                 HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHTTT.SSS-GGGSHHHHHHH CS
  SoDot-IcmSS 44 kfLtavleaLdassiepeekarvlagamllvrkqieeeyr.vltkpsnsllyksLt 98
                  fL    ++ d +s++ ee + vl ga ++ ++ i+ +++    k ++s+ly+++t
   KHJ33136.1 17 AFLRHQDKEFDFKSTKLEETTSVLDGAEYVFHNAIDVSLNlQGVKMTASMLYNKMT 72
                 57788888889899999*********************99667899*******987 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.3
                  S-CCBSSTTTTTSTCHHHHHHHHHHHHH CS
  SoDot-IcmSS 142 kqslkkkhilseiagyklesvlkllidm 169
                  +  +k + i+ +  +y+l++ +++  ++
   KHJ33136.1 332 HSEFKVNSIMVDFFLYDLIKNWEKTDQR 359
                  5667777777777777777777766555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2862.90
//
Query:       KHJ33137.1  [L=93]
Description: hypothetical protein EV44_g3522 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       844  (0.0470746); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 756.47
//
Query:       KHJ33138.1  [L=609]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (609 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       949  (0.052931); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 4463.32
//
Query:       KHJ33139.1  [L=925]
Description: putative plasma membrane atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-46  158.6   2.9    1.2e-46  158.6   2.9    3.1  4  E1-E2_ATPase     E1-E2 ATPase
      9e-16   58.8   0.1    3.1e-15   57.0   0.1    2.0  1  Hydrolase        haloacid dehalogenase-like hydrolase
    7.2e-12   44.8   0.0    1.6e-11   43.7   0.0    1.6  1  Cation_ATPase_N  Cation transporter/ATPase, N-terminus
  ------ inclusion threshold ------
      0.014   15.1   1.4      0.015   15.1   0.1    1.7  2  Hydrolase_3      haloacid dehalogenase-like hydrolase
      0.016   14.0   5.6       0.04   12.7   5.6    1.6  1  O-antigen_lig    O-antigen ligase like membrane protein


Domain annotation for each model (and alignments):
>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.33   1.2e+03     107     145 ..     110     148 ..     100     163 .. 0.59
   2 !  158.6   2.9   3.2e-50   1.2e-46       4     181 .]     182     361 ..     179     361 .. 0.98
   3 ?   -0.6   0.0      0.23   8.2e+02      50      79 ..     557     586 ..     548     590 .. 0.83
   4 ?   -5.4   1.7         5   1.8e+04     124     145 ..     838     859 ..     832     872 .. 0.52

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.33
                   ---HHHHHHHHHHHH.HHHHHHHHHHHHHHS-STTTSSTT CS
  E1-E2_ATPase 107 kktplqkkldklgkv.lvpvvlliallvflialllgksla 145
                    k + ++++ k+ ++ l p+ ++++++++l+a  l++++ 
    KHJ33139.1 110 MKEEKENMVLKFLGYfLGPIQFVMVAAAILAA-GLQDWVD 148
                   55566777778887735556655555555554.4444444 PP

  == domain 2  score: 158.6 bits;  conditional E-value: 3.2e-50
                   --EEEEE-TTS-EEEEGGG--TTSEEEEETT-B--SEEEEEEE-S..EEE-TTTS---S-EE-G-TTEE-TT-EEEE-EEEEEEEE-TTTSTTTTTS CS
  E1-E2_ATPase   4 pptakvirdgteeeidakelvpGDivllkagdrvpaDgrivegsa..evdesaLTGEslpvekekgdmvfsGtvvvsgeakavVtatgedtelgkia 98 
                   + +a v+r+g++ e+d++++vpGDi+ +++g ++paDg i+ + a  +vd+saLTGEsl v+k++gd +f+++ v++gea +++  tg +t++g++a
    KHJ33139.1 182 ALKASVLREGRIYEVDTADVVPGDILHIEEGTIIPADGNIITEDAflQVDQSALTGESLTVDKHRGDGCFASSCVKRGEAFMIIASTGDSTFVGRAA 278
                   66899******************************************************************************************** PP

                   TTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTTHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHT CS
  E1-E2_ATPase  99 rlveeakskktplqkkldklgkvlvpvvlliallvflialllgkslaeallralallvaaiPcaLplavplalalgarrlakk 181
                   +lv++a+s + ++++ l+ +gkvl ++v+l +l+v++  +++ k+++++l  +la+ ++ +P +Lp++v++++a+ga+ lakk
    KHJ33139.1 279 TLVSQASSGTGHFTEVLNGIGKVLLILVILTLLVVWISSFYRSKPIVTILEYTLAITIIGVPVGLPAVVTTTMAVGAAYLAKK 361
                   ********************************************99899999*****************************97 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.23
                   EE-TTTS---S-EE-G-TTEE-TT-EEEE- CS
  E1-E2_ATPase  50 vdesaLTGEslpvekekgdmvfsGtvvvsg 79 
                   +   +LTG+++ + +e+  ++  Gt++ + 
    KHJ33139.1 557 LSIKMLTGDAVGIARETSRQLGLGTNIYNA 586
                   56789****************999999875 PP

  == domain 4  score: -5.4 bits;  conditional E-value: 5
                   HHHHHHHHHHHHS-STTTSSTT CS
  E1-E2_ATPase 124 pvvlliallvflialllgksla 145
                   +v ++++l++++ +++ g++  
    KHJ33139.1 838 AVDIIATLFTIFGWFVGGQTSL 859
                   4445555555555555444433 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.0   0.1   8.6e-19   3.1e-15       3     210 .]     379     651 ..     377     651 .. 0.64

  Alignments for each domain:
  == domain 1  score: 57.0 bits;  conditional E-value: 8.6e-19
                 EEEEESBTTTBCHHHHHHH..HHHHH.....CHHHHHHHHHH....HHCHHHHHHHHHHHHH...HHHHHHHHHETTTEHHHHTHHHHHHHH...HCHH CS
                 xxxxxxxxxxxxxxxxxxx..xxxxx.....xxxxxxxxxxx....xxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxx RF
   Hydrolase   3 tvvfDkdGTLttgepsved..vivsa.....alalaaaletg....sehpigkalvaaakar...sgaltgfatfigrgayaigkpewltal...dipp 84 
                  ++ Dk+GTLt+ + s+ d  +         +l l a l+ +        i ka+ +a  +    +                  k + ++ +   ++++
  KHJ33139.1 379 ILCTDKTGTLTKNKLSLADpfT--VPgvepdDLMLTACLAASrkkkGIDAIDKAFLRALRKYsraK--------------SVLPKYRVVEFHpfdPVSK 461
                 6899**********88888541..222455545555555555322222233333333333332221..............2222222222223334444 PP

                 HHHHHHHHHHHHCHHHHHH...............................................TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEE CS
                 xxxxxxxxxxxxxxxxxxx...............................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  85 dlgaaigsaqsqgrtvall...............................................qaralavftiadplkvkpeaaeavasLkaagie 136
                 +++a ++s q++  + +                                                 + ++l++    dp  ++ ++a +v++ k  g+ 
  KHJ33139.1 462 KVRAIVESPQGERIICVKGsplfvlktveedhpipeeidlayknkvaefatrgfrslgvarkrgegSWEILGIMPCFDP--PRHDTARTVNEAKTLGLS 558
                 44444444444444443334444444444444444444444445555555555558888999887777***********..****************** PP

                 EEEEESSEHHHHHHHHHHTT...............GGGESEEEEHHCES................STTTSHHHHHHHHHHHTSTGGGEEEEESSHHHHH CS
                 xxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxx................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 137 vvlltgdnpetaeraanqlG...............ddyfdaviasdiet................vakpspegkvaaireLqgkpeevamVGDgvnDaa 204
                 + +ltgd    a+++ +qlG                            +                +a++ p++k  +++ Lq ++  vam GDgvnDa+
  KHJ33139.1 559 IKMLTGDAVGIARETSRQLGlgtniynaerlglggG------------GdmpgsevydfveaadgFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAP 645
                 ********************8876666655555552............13334444444446899*****************99999************ PP

                 HHHHTT CS
                 xxxxxx RF
   Hydrolase 205 alaaAg 210
                  l++A+
  KHJ33139.1 646 SLKRAD 651
                 ****98 PP

>> Cation_ATPase_N  Cation transporter/ATPase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.7   0.0   4.6e-15   1.6e-11      11      69 .]      83     140 ..      82     140 .. 0.96

  Alignments for each domain:
  == domain 1  score: 43.7 bits;  conditional E-value: 4.6e-15
  Cation_ATPase_N  11 ekLetdlenGLtqaeaaerlkkyGpNelkekkkkslwvkllkqftnplvilLlvaalvs 69 
                      ++L+td+ +GLt+ae+  r+kkyG N++ +++k++++ k+l  f  p+  ++++aa+++
       KHJ33139.1  83 DQLQTDPRTGLTEAEVLLRRKKYGANQM-KEEKENMVLKFLGYFLGPIQFVMVAAAILA 140
                      589*************************.99999**********************985 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.2       1.5   5.3e+03     129     164 ..      24      59 ..      11      72 .. 0.68
   2 ?   15.1   0.1   4.1e-06     0.015     206     244 ..     634     672 ..     620     683 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.5
                  EEESHHHHHCHCSESEEEEES-HHHHHHHHHHHHHH CS
  Hydrolase_3 129 eeidseeeledeeiakililkdkekldelekelksk 164
                  ++i  ++++++e    i + ++++++d l++el+s+
   KHJ33139.1  24 NNIPRDSQETNEARKSIHFMDEEDDMDALIDELDSD 59 
                  444444455554555555888888888888888776 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 4.1e-06
                  EEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEE- CS
  Hydrolase_3 206 viafGDgeNDieMLeaaglgvAmgnaseevkkaAdyvtk 244
                  v+  GDg ND + L++a++g+A++ +s+ + +aAd v  
   KHJ33139.1 634 VAMTGDGVNDAPSLKRADTGIAVEGSSDAARSAADIVFL 672
                  6778*******************************9975 PP

>> O-antigen_lig  O-antigen ligase like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   5.6   1.1e-05      0.04     166     241 ..     291     367 ..     271     388 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.1e-05
  O-antigen_lig 166 wfysaNelssilllllpivllyllkkkks.ikfiiillllillllllGTKvalfGliiiliialillliklilkkkk 241
                    + ++ N ++++ll+l+++ ll +  + ++  k i+++l ++l+++++G  v+l +++ +++++ +++l k+  + +k
     KHJ33139.1 291 FTEVLNGIGKVLLILVILTLLVVWISSFYrSKPIVTILEYTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQK 367
                    4566799**************999999999***************************************93333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (925 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       737  (0.0411066); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.72u 0.25s 00:00:00.97 Elapsed: 00:00:00.41
# Mc/sec: 6807.44
//
Query:       KHJ33140.1  [L=180]
Description: putative ormdl family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-57  192.5   4.0    2.8e-57  192.3   4.0    1.0  1  ORMDL     ORMDL family


Domain annotation for each model (and alignments):
>> ORMDL  ORMDL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.3   4.0   1.6e-61   2.8e-57       1     136 []      35     169 ..      35     169 .. 0.99

  Alignments for each domain:
  == domain 1  score: 192.3 bits;  conditional E-value: 1.6e-61
       ORMDL   1 nkntewvnskglwviyiviilllkllllalpgvseevawtltnlvhnlvtyillHwikGtPfetadqgeydeltlWEQidegeqytptrkfLtvvPivL 99 
                 n n++wvn+kg+w+i++v+i++lk+l++++pg+s+e++wtltn+++++++++++Hw++G Pfe+ ++g+yd+l++WEQid+g+qytp++kfL++vPi+L
  KHJ33140.1  35 NLNANWVNAKGAWTIHLVLIICLKVLFDIIPGISQETSWTLTNISYMFGSFLMFHWVRGVPFEF-NAGAYDNLNMWEQIDNGAQYTPAKKFLLSVPILL 132
                 88**************************************************************.********************************** PP

       ORMDL 100 fllsthytkydlelfvinlivllvvvipKlpfmhrvR 136
                 fllsthyt+ydl +f+in++++l vvipKlp  hr+R
  KHJ33140.1 133 FLLSTHYTHYDLMYFTINFLAVLGVVIPKLPYSHRTR 169
                 ***********************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1342.75
//
Query:       KHJ33141.1  [L=314]
Description: putative krueppel c2h2-type zinc finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.1e-05   23.8  15.2    0.00049   20.4   3.4    2.7  2  zf-C2H2    Zinc finger, C2H2 type
     0.0026   18.4  13.4      0.079   13.8   3.8    2.8  2  zf-C2H2_4  C2H2-type zinc finger
  ------ inclusion threshold ------
       0.11   12.8   2.2       0.28   11.5   2.2    1.6  1  zf-C2H2_8  C2H2-type zinc ribbon


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   3.4   8.1e-08   0.00049       1      23 []      29      53 ..      29      53 .. 0.93
   2 !    8.4   4.1   0.00054       3.2       2      23 .]      59      80 ..      59      80 .. 0.94

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 8.1e-08
                EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCp..dCgksFkrksnLkrHirtH 23
                + C+  +Cgk+F+r+++L+rH   H
  KHJ33141.1 29 FACSfsGCGKCFSRSEHLQRHALNH 53
                679999***************9988 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00054
                EETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2  2 kCpdCgksFkrksnLkrHirtH 23
                +C  C   F+r+++L rH+ +H
  KHJ33141.1 59 TCLRCMTHFRRRDLLDRHMARH 80
                6899999**************9 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   3.8   1.3e-05     0.079       1      23 [.      29      53 ..      29      54 .. 0.94
   2 !    9.3   2.2   0.00037       2.2       2      23 ..      59      80 ..      58      81 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.3e-05
   zf-C2H2_4  1 fkCpi..CgksFsskkaLlrHlkth 23
                f C++  Cgk Fs++++L+rH ++h
  KHJ33141.1 29 FACSFsgCGKCFSRSEHLQRHALNH 53
                7899999***************999 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00037
   zf-C2H2_4  2 kCpiCgksFsskkaLlrHlkth 23
                +C  C + F++++ L rH+++h
  KHJ33141.1 59 TCLRCMTHFRRRDLLDRHMARH 80
                5999*****99999*******9 PP

>> zf-C2H2_8  C2H2-type zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   2.2   4.7e-05      0.28      29      87 ..      22      78 ..       2      87 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.7e-05
   zf-C2H2_8 29 qslegklfrcstascaetfpsmqelvahtklhykpnryfkcencllrfrthrslfkhlh 87
                + +  k+f cs + c ++f   + l  h+  h   +    c  c+  fr    l +h+ 
  KHJ33141.1 22 ENVVKKKFACSFSGCGKCFSRSEHLQRHALNHKDGD--NTCLRCMTHFRRRDLLDRHMA 78
                567789*************99999999997776655..47999*****99888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2289.73
//
Query:       KHJ33142.1  [L=634]
Description: putative arginyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     4e-100  335.1   3.5   5.8e-100  334.6   3.5    1.2  1  tRNA-synt_1d     tRNA synthetases class I (R)
    1.9e-28   99.0   0.1    5.8e-28   97.5   0.1    1.9  2  DALR_1           DALR anticodon binding domain
    7.6e-08   32.8   0.0    5.7e-07   30.0   0.0    2.4  2  Arg_tRNA_synt_N  Arginyl tRNA synthetase N terminal domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1d  tRNA synthetases class I (R)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  334.6   3.5  9.6e-104  5.8e-100      17     348 ..     150     502 ..     137     503 .. 0.97

  Alignments for each domain:
  == domain 1  score: 334.6 bits;  conditional E-value: 9.6e-104
                   SST-EEEEE----BTTS--BHHHHHHHHHHHHHHHHHHHCT-EEEEEE--B-SSTCHHHHHHHHHHHTTTTTTS-----SCCCHHHHHHHHCCCSHC CS
  tRNA-synt_1d  17 rekkkvvvdfssPniakemhvGhLrstiiGdavsrlleflGydvirlnhvGDWGtqfGlLiaylekkqdekllqeqelqdLeafykeakkdydeeei 113
                     kk+++++fssPniak++h+GhLrstiiG+++s+l+e +G+dv+r+n++GDWG+q+GlL+++++k++dek+lq  ++++L ++y++++kd++ e  
    KHJ33142.1 150 LGKKRIIIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEGAGWDVVRVNYLGDWGKQYGLLAIGFDKYGDEKALQLDPINHLYEIYVKINKDLAAEKD 246
                   5689****************************************************************************************98887 PP

                   ...................CCHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHHHHHHHHHCT---EC.--CC.CCCCCHHHHHHHHHCTT-EEECTTC CS
  tRNA-synt_1d 114 ...................faerarnyvvkLqsgdedirklwkllvditrtelqklydrldvtlie.rGes.lykeslneivkelkkkglvkesdGa 189
                                      + e+ar y++ + ++de     w++  +++ ++++++y+rl+++  +  Ges + +e+++ + +++ + g+ +es+Ga
    KHJ33142.1 247 sikeleavgrdtkdlkengLDEQARRYFKAMTDNDETAIAQWSRFRELSIKRYRETYARLNISFDDySGESqVKQEKMDWAAQKMAEMGITEESEGA 343
                   789************************************************************98889***************************** PP

                   EEEEECCC.....TSSCCE.ECC-TTS-B-HHHHHHHHHHHHHHTT--SEEEEEEECCCHHHHHHHHHHHHCTTSSTTTSEEEEEEE--EE-TTSSB CS
  tRNA-synt_1d 190 lvvfldef.....gkrlgv.vvqksDGgylytttDiaaakerkeelkadkvlyvidsrqslhlqqiflilkkigyvpeskdlehanfGmvlgkdkkk 280
                    +v+ +++     gk+l + +++k+DG+ ly+t+Di+ + +rke+ ++d+++yv+ s q+lhl+q+f i+  +g+   +k+++h nfG+vlg     
    KHJ33142.1 344 IIVDFSKHipgkaGKSLERpLIKKRDGTALYLTRDISEVLQRKEKYNFDHMIYVVASAQDLHLKQLFKIIELMGFTQLAKKVQHVNFGLVLG----- 435
                   ******999***9******9*******************************************************999************76..... PP

                   SBCSSSTC-BHHHHHHHHHHHHHHHHCCCCCCTS-CCCCHCHHHHHHHHHHHHCCCCTS-TTS-EE-- CS
  tRNA-synt_1d 281 fktrkGetvkLadlLdealeralqlikeknkdkvlqadelekvaeavgvgaikyaDlsknrindyifd 348
                   ++trkG + +L+d+L +  e+  + +++knk k  q +++ + a+++g++++ ++D+s +rin+y+f+
    KHJ33142.1 436 MSTRKGTVKFLDDILRDVAEKMHE-VMQKNKTKYEQIEDPLATADTLGISSVMVQDMSGKRINNYEFN 502
                   9*******************9888.******************************************8 PP

>> DALR_1  DALR anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0       2.7   1.6e+04      63      78 ..     448     463 ..     433     471 .. 0.63
   2 !   97.5   0.1   9.7e-32   5.8e-28       1     119 []     517     634 .]     517     634 .] 0.98

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 2.7
                 HHHHHHHHHHHHHHHH CS
      DALR_1  63 eylyeLaatfhkfYnk 78 
                 + l ++a+++h++ +k
  KHJ33142.1 448 DILRDVAEKMHEVMQK 463
                 4555666666655444 PP

  == domain 2  score: 97.5 bits;  conditional E-value: 9.7e-32
                 HHHHHHHHHHHHHHTTCTTCCCCHCCHCCS-SHHHHHHHHHHHTHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHCTSTTSCTHHH.HHHHHHHHH CS
      DALR_1   1 vqyahaRiksilrkaeeegekleeealalleeeeekeLlkalaqfpevleeaaeelephklaeylyeLaatfhkfYnkervlkeeeeelaaaRLaLvka 99 
                 +qyahaR++si rka+ ++++  +++l++l+e++  +L++ l q+p+v+++a+++lep ++++yl+++ +  ++ Y+  rv+++e+e + +aR+aL  a
  KHJ33142.1 517 LQYAHARLCSITRKAGLSDDDIFSADLSFLTEPQAHNLIRVLSQYPDVVQNALKTLEPATILTYLFKMTHILSSSYDILRVVGSEKELM-KARMALYTA 614
                 6******************99999999999999*****************************************************977.********* PP

                 HHHHHHHHHHHTT----S-- CS
      DALR_1 100 vrqvLangLdlLGieapekm 119
                  r vL+ng++lLG++++e+m
  KHJ33142.1 615 SRIVLSNGMRLLGLSPVERM 634
                 *******************9 PP

>> Arg_tRNA_synt_N  Arginyl tRNA synthetase N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   9.6e-11   5.7e-07       4      85 .]      36     114 ..      33     114 .. 0.94
   2 ?   -0.7   0.0      0.37   2.2e+03      53      74 ..     450     472 ..     422     473 .. 0.85

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 9.6e-11
                      HHHHHHHHHHHHSS-HHHHGGG-E-.SSGGG-SEEEEGGGG--TT-..-HHHHHHHHHHT---TTTEEEEEEETT.EEEEEE CS
  Arg_tRNA_synt_N   4 keaiaealkkaagadleeeeiviekpknpkfGDyatnvamqlakklkknPreiAeeiaeklekseiiekvevagpGFiNffL 85 
                      +++++  l k++g d++++ ++++ ++  ++GD+ +++  +  +  +k+P+e+A+e++ek+++s+ + k  v+g  F++ff+
       KHJ33142.1  36 RAHLTSILTKVTGVDESIVYPALQWTQTLEKGDLILPI--PALRIKGKKPNELASEWIEKFPESTLVHKPSVSGT-FLQFFF 114
                      678888999999999*********99***********7..99999*****************************9.****96 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.37
                      HHHHHHHHHHT---TTT.EEEEE CS
  Arg_tRNA_synt_N  53 PreiAeeiaekleksei.iekve 74 
                       r++Ae+  e ++k+++ +e++e
       KHJ33142.1 450 LRDVAEKMHEVMQKNKTkYEQIE 472
                      5899****999999998788776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (634 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       852  (0.0475208); expected 358.6 (0.02)
Passed bias filter:                      597  (0.033298); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 4391.93
//
Query:       KHJ33143.1  [L=1195]
Description: putative phd-finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.2e-16   58.9  17.4    6.7e-09   35.5   7.7    2.6  2  PHD           PHD-finger
      2e-05   24.8   5.6     0.0015   18.7   0.6    3.3  3  zf-HC5HC2H    PHD-like zinc-binding domain
  ------ inclusion threshold ------
      0.038   14.1   5.4       0.38   10.9   1.1    3.0  3  zf-HC5HC2H_2  PHD-zinc-finger like domain
      0.089   12.4  11.4       0.24   11.0   0.2    3.4  3  PHD_2         PHD-finger
       0.58   10.5   5.6         17    5.8   0.1    2.8  2  zf-RING-like  RING-like domain
          2    8.4  13.6       0.16   11.9   0.6    3.1  3  C1_1          Phorbol esters/diacylglycerol binding domain (C


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   7.7   2.2e-12   6.7e-09       1      51 [.     801     848 ..     801     849 .. 0.90
   2 !   28.4   2.1   3.6e-10   1.1e-06       2      47 ..     932     978 ..     930     979 .. 0.90

  Alignments for each domain:
  == domain 1  score: 35.5 bits;  conditional E-value: 2.2e-12
                 SBTTTTSTTSTTSCEEEET..TTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   1 rCavCkkksdeeeelvqCd..gCkrwfHqkClkppleseekpegewlCekCke 51 
                 +Ca+C++    ++e+v+Cd  +C+r+fH kC++pp  ++  pe  w+C++C+ 
  KHJ33143.1 801 FCAACGG----NGEVVCCDgdTCRRSFHFKCVDPPIMPDALPE-TWFCNECRV 848
                 7******....9******7437**************9888887.*******86 PP

  == domain 2  score: 28.4 bits;  conditional E-value: 3.6e-10
                 BTTTTS.TTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSST CS
         PHD   2 CavCkk.ksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCe 47 
                 C+ C+  ++  +++++qC  C+   H +Cl++pl +e+   + w+C+
  KHJ33143.1 932 CHRCGLqAEAPDRFIIQCSFCNLYWHLDCLDIPLAKEPSAGRPWQCQ 978
                 8899986666699**********************9999999****7 PP

>> zf-HC5HC2H  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       1.1   3.3e+03      49      64 ..     459     474 ..     453     493 .. 0.78
   2 !   18.7   0.6   5.1e-07    0.0015      26      66 ..     789     828 ..     774     831 .. 0.82
   3 !    6.7   0.0    0.0028       8.5      14      66 ..     908     961 ..     899     965 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.1
  zf-HC5HC2H  49 ciqCskkkCkkafHvt 64 
                  i+C +k+C +a  +t
  KHJ33143.1 459 KINCFEKNCLEAVKIT 474
                 699******9988766 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 5.1e-07
  zf-HC5HC2H  26 dvekikkerkklkCylCkkkvGaciqCskkkCkkafHvtCa 66 
                 + +    + ++  C  C  + G ++ C+  +C+++fH++C 
  KHJ33143.1 789 NGNYGTYDDNDDFCAACGGN-GEVVCCDGDTCRRSFHFKCV 828
                 5555556678889*******.*******************6 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0028
  zf-HC5HC2H  14 eeekeiemeeiedvekikkerkklkCylCkkk....vGaciqCskkkCkkafHvtCa 66 
                 ++ +   +e++++++k +++ k   C  C  +       +iqCs   C+ ++H+ C 
  KHJ33143.1 908 TNRSG-WEETPDNFRKKDSKGKPILCHRCGLQaeapDRFIIQCSF--CNLYWHLDCL 961
                 44443.468889999999999999*****95533345689****9..*********6 PP

>> zf-HC5HC2H_2  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.4   4.2e+03      67      83 ..     458     474 ..     424     493 .. 0.82
   2 ?   10.9   1.1   0.00013      0.38      54      85 ..     798     828 ..     778     833 .. 0.83
   3 ?    3.6   0.1     0.024        71      51      84 ..     922     960 ..     900     968 .. 0.69

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.4
  zf-HC5HC2H_2  67 aciqCskkeCktafHvt 83 
                   ++i+C +k+C +a  +t
    KHJ33143.1 458 LKINCFEKNCLEAVKIT 474
                   68999999998876655 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00013
  zf-HC5HC2H_2  54 lkekCllCkkrkGaciqCskkeCktafHvtCa 85 
                     + C+ C   +G  + C  ++C+++fH  C 
    KHJ33143.1 798 NDDFCAACGG-NGEVVCCDGDTCRRSFHFKCV 828
                   46779***99.5*******************6 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.024
  zf-HC5HC2H_2  51 kerlkekCllCkkr.......kGaciqCskkeCktafHvtC 84 
                   k+ +k k +lC++          + iqCs   C+ ++H  C
    KHJ33143.1 922 KKDSKGKPILCHRCglqaeapDRFIIQCSF--CNLYWHLDC 960
                   4444444444444444467778899*****..*******99 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   2.2    0.0045        13       3      36 .]     810     847 ..     808     847 .. 0.85
   2 ?    0.3   0.1      0.18   5.4e+02      23      35 ..     923     935 ..     922     936 .. 0.82
   3 ?   11.0   0.2     8e-05      0.24       4      33 ..     946     978 ..     944     979 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0045
       PHD_2   3 pllsCd..kCsvaVHasCYGvskesdgee..WlCrrCe 36 
                  ++ Cd   C+ ++H +C   + ++d+ +  W C+ C+
  KHJ33143.1 810 EVVCCDgdTCRRSFHFKCVDPPIMPDALPetWFCNECR 847
                 578888889*********9999888886678******6 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.18
       PHD_2  23 kesdgeeWlCrrC 35 
                 k+s+g++ lC rC
  KHJ33143.1 923 KDSKGKPILCHRC 935
                 677888999***9 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 8e-05
       PHD_2   4 llsCdkCsvaVHasCYGvskesdgee...WlCr 33 
                 +++C+ C++  H +C  ++  ++      W C+
  KHJ33143.1 946 IIQCSFCNLYWHLDCLDIPLAKEPSAgrpWQCQ 978
                 89**************99866654334459997 PP

>> zf-RING-like  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   2.0     0.011        33      12      29 ..     812     829 ..     802     839 .. 0.88
   2 ?    5.8   0.1    0.0056        17      13      29 ..     948     962 ..     946     973 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.011
  zf-RING-like  12 vrCsnesCnvrlHvdCfq 29 
                   v C  ++C++++H +C++
    KHJ33143.1 812 VCCDGDTCRRSFHFKCVD 829
                   67999***********97 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0056
  zf-RING-like  13 rCsnesCnvrlHvdCfq 29 
                   +Cs   Cn  +H dC++
    KHJ33143.1 948 QCS--FCNLYWHLDCLD 962
                   688..8*********97 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   2.8     0.037   1.1e+02      10      43 ..     798     828 ..     792     830 .. 0.80
   2 ?   -2.1   0.1       1.3   3.8e+03      12      18 ..     841     847 ..     835     852 .. 0.67
   3 ?   11.9   0.6   5.2e-05      0.16       9      44 ..     927     962 ..     919     969 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.037
                 S--B-TTT-SB--SSSS-EEEETTT--EE-CCCC CS
        C1_1  10 qptfCkhCgeflwgkekqglkCswCkllvHkkCh 43 
                 +  fC+ Cg      e +++  ++C++++H kC+
  KHJ33143.1 798 NDDFCAACGGNG---EVVCCDGDTCRRSFHFKCV 828
                 567899998877...666666689*********7 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.3
                 -B-TTT- CS
        C1_1  12 tfCkhCg 18 
                  fC++C+
  KHJ33143.1 841 WFCNECR 847
                 4566664 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 5.2e-05
                 SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCT CS
        C1_1   9 kqptfCkhCgeflwgkekqglkCswCkllvHkkChe 44 
                  +p  C  Cg + +   + +++Cs C+l+ H +C+ 
  KHJ33143.1 927 GKPILCHRCGLQAEAPDRFIIQCSFCNLYWHLDCLD 962
                 56778*******9669999***************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       899  (0.0501422); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.77u 0.28s 00:00:01.05 Elapsed: 00:00:00.44
# Mc/sec: 8088.38
//
Query:       KHJ33144.1  [L=703]
Description: putative chromatin remodeling complex protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.1e-64  216.0   0.2    6.8e-62  209.4   0.0    3.0  2  SNF5      SNF5 / SMARCB1 / INI1


Domain annotation for each model (and alignments):
>> SNF5  SNF5 / SMARCB1 / INI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.014   2.5e+02      42      73 ..      44      75 ..      33      94 .. 0.80
   2 !  209.4   0.0   3.8e-66   6.8e-62       1     237 []     135     361 ..     135     361 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.014
        SNF5 42 qtlveDldlpeeaavveeiskqireqleeyag 73
                + l++  + +++++  +ei++++r+q+++y +
  KHJ33144.1 44 RDLIHTAAAEKDQQNRKEIQTNLRNQIDDYRK 75
                56777777777788999*************55 PP

  == domain 2  score: 209.4 bits;  conditional E-value: 3.8e-66
        SNF5   1 qaekpetLvPiridldidkyrlrDtFlwNlhetlitpeqFaqtlveDldlpeea..avveeiskqireqleeyagvalhelasekkesatpaekkesee 97 
                 qae+ e+LvPir+++d+dk++lrDtF+wNlh+++i+++ Fa +lveD++l   +  +vve++++q+r ql+++      ++   k++s +         
  KHJ33144.1 135 QAEQIEELVPIRLEVDWDKIKLRDTFTWNLHDRVISTDLFAAQLVEDFGLAVPPanTVVEQVQHQVRGQLNDF----YPQVYI-KEDSLD--------- 219
                 899*********************************************998666669****************....222211.111111......... PP

        SNF5  98 dtpkakiseeeekeeke.nkddelRvlikldiqigsklltDkfEWdllsplntpEeFAkqlcadlgLsgefvtaiaHaIrEqvlkykksllesgllvag 195
                             + +++ +k++e+R+likl+i+ig ++l+DkfEW+++++ln+pEeFA++++++l+Lsgef+taiaH+IrEq++ +++sl+        
  KHJ33144.1 220 -----------PELPYTaYKNEEMRILIKLSITIGPHTLEDKFEWEINNHLNSPEEFAQSMTRELSLSGEFTTAIAHCIREQCQLFTRSLY-------- 299
                 ...........123445599***********************************************************************........ PP

        SNF5 196 lkkleagwrfd........................eelaeefepkleelskeelekrekerereir 237
                      +g++fd                        +++ +e+ p+l+el++++l++ e+  +re+r
  KHJ33144.1 300 ----IVGHPFDgrpledadlissflpsplptvlrpQQQLREYGPYLYELTEADLKRSEIIYSREQR 361
                 ....8888888888888999999999999999997669*************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (703 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       768  (0.0428356); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 4835.99
//
Query:       KHJ33145.1  [L=678]
Description: putative duf1941 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.5e-62  209.8   2.9      9e-62  209.3   2.9    1.1  1  Neurochondrin  Neurochondrin
  ------ inclusion threshold ------
        2.7    7.9   6.0         21    5.0   0.2    3.0  3  DUF3361        Domain of unknown function (DUF3361)


Domain annotation for each model (and alignments):
>> Neurochondrin  Neurochondrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.3   2.9     1e-65     9e-62      10     469 ..      50     541 ..      42     581 .. 0.88

  Alignments for each domain:
  == domain 1  score: 209.3 bits;  conditional E-value: 1e-65
  Neurochondrin  10 clklLrgkknDterfaaLlLvtkvvknsdidaknk..ravfeavgfkFldrLlktksapsdc..nervyralavailacFca..eeelashsevve 99 
                      klL ++k+Dt+rfa+ ++++ v++n+ + +     r ++e ++ kFldrLl+++  ++     ++ + ++a+++l+ F +  +++   ++++v 
     KHJ33145.1  50 KIKLLFQTKDDTSRFAGFAILKTVLENEKVIKDSDriRVLWETIPPKFLDRLLRAQLNENISkqDANSMNDIAISVLHVFVNllPDNSMIEQRLVA 145
                    4577888888*****************99765543114556*************99866655558899**************95555667899*** PP

  Neurochondrin 100 rIPtllevllkasdedntemvddayecLkavaatprGakaliasgavsaliqiyseqsyaldealalllllvsksesssweekelellaviakiae 195
                    r+P l+  l+++    ++++   ++++L a++++ +G  ++++  ++s li i+ +++++l+ +  +++++ s+ +     + e  +  +++ i  
     KHJ33145.1 146 RVPSLVIALTNTPS--ERKV--TILKILLAIVSHLEGSIEFLNVQNISPLISIVTQEPLVLNLFHFAWVNVASNGD-----RVEIVREGIDKLIPC 232
                    **********9988..3444..4789********************************************988766.....557788899999*** PP

  Neurochondrin 196 dfesaedaskfellelLaallpslrsellleslqgqewlesLnkgvanilksklspsqrdpalkLaaallev...lgsqwlftdek.....gkkfl 283
                     + +++d+++ +ll+++a+llp+l  e+ ++ + +++wl+ L   ++n++  k ++++r++++ L a+ll++      ++lf +++       +f+
     KHJ33145.1 233 LILQFKDTDEITLLNFIAELLPKL--EP-AVLSYQPKWLNPLVGIIRNLVVKKSTKEGRKAYTTLTASLLSIwtsSCANLLFENSSsknldLRPFS 325
                    ************************..77.5666779************************************8875567999998878887789** PP

  Neurochondrin 284 llllelalvevrltlee....kkseevekkeevltacfsliehiieyllr......eeqslldeaqklklvtilkeafgavleyLrdvke...... 363
                    +  ++l+l+++r+t+ +    ++  ++++ +++l+a+f +i+  ++ ll+      +  ++l +  +l+l++ + e+f++++e++rd+ +      
     KHJ33145.1 326 YVFVSLLLIDIRSTISTllpeLNNSSYLEISQRLSAAFDIISSFLGVLLQsldtpnHSTLKLTPDLLLRLRKDIAETFSLTIEFMRDRWDasiaga 421
                    *************98888877999************************999987533334455********************************* PP

  Neurochondrin 364 ....................ekikdsv....fvlAsvrvlgawLaeetsa.lrkevseLldfllkvaresfkeadpakadtregeqpldalrllLp 434
                                        e++ + v    +++A+ r+l++w++e++++ lr e  +L d  ++++++  ++    +++       ld++  +  
     KHJ33145.1 422 aglhpsarstplgsrlgltwESMSNHVstdpLLFAATRALAIWIREDENEnLRCESAGLMDMWIDLYERRSND----QDI-------LDIRYSIAL 506
                    ********************66666666677************************************998888....344.......999999*** PP

  Neurochondrin 435 alchltveeegreillaeggdealveyllfqfelv 469
                    al+++     g+e++l + g+++ ++ l +    +
     KHJ33145.1 507 ALEGVMSIYDGVESFLIQDGWKVFANDLNHIIRYT 541
                    ************************99777655444 PP

>> DUF3361  Domain of unknown function (DUF3361)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.2    0.0024        21      59      82 ..      28      51 ..      13      61 .. 0.84
   2 ?    4.2   0.4    0.0042        38      44     126 ..      87     174 ..      80     181 .. 0.79
   3 ?   -2.1   0.0      0.37   3.3e+03     112     135 ..     605     628 ..     580     651 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0024
     DUF3361 59 asivnksaadasilqrslaiLesi 82
                   +++++ ++++++ slaiLe+i
  KHJ33145.1 28 KPSISSQNVEQKVVEDSLAILEKI 51
                557889999*************98 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0042
     DUF3361  44 ivsWdtlsdeFikkias.ivnks..aad.asilqrslaiLesivlnsselyelvekevt..lesLiehLqssnqeiqtnalaLlnALll 126
                  v W+t+ ++F+ +     +n++  ++d +s+   ++++L  +v       +++e+ +   ++sL+  L ++ +e + + l +l A++ 
  KHJ33145.1  87 RVLWETIPPKFLDRLLRaQLNENisKQDaNSMNDIAISVLHVFVNLLP-DNSMIEQRLVarVPSLVIALTNTPSERKVTILKILLAIVS 174
                 588**********998624666687777678888999**998877666.6788888876568999999999999988888888888765 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.37
     DUF3361 112 eiqtnalaLlnALllkaddskrke 135
                 e q   l L  ALl+ka d   k+
  KHJ33145.1 605 EFQIAMLQLSLALLTKAADGMTKR 628
                 456667777777887777655444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (678 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       698  (0.0389313); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.31s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 4743.86
//
Query:       KHJ33146.1  [L=325]
Description: putative cytochrome c peroxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.7e-47  160.3   0.0    7.8e-47  159.9   0.0    1.2  1  peroxidase  Peroxidase


Domain annotation for each model (and alignments):
>> peroxidase  Peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.9   0.0   4.4e-51   7.8e-47       1     229 []      10     246 ..      10     246 .. 0.93

  Alignments for each domain:
  == domain 1  score: 159.9 bits;  conditional E-value: 4.4e-51
                 HHHHHHHCCCC....TTTHCHHHHHHHHHHHTT.......SSTTSCHHHTCCHHCSGGGTTTHHHHHHHHHHHHHCTT.....S-HHHHHHHHHHHHHH CS
  peroxidase   1 vrafvkaalka....drdmgpsllrlafhdcfv.......gGcdgsvlllepektapaNaslrkgldvldaikakleaacpgvvScADlialaardave 88 
                 vr++++++l++    d+++gp l+rla+h++++       gG +g+ ++ e+e  +paNa+l++++ +l+++k+++++     +++ADl++la+ +a+e
  KHJ33146.1  10 VRKEIAKLLHKpgydDGSAGPVLVRLAWHSAGTydfetdtGGSNGAGMRYEAEGGDPANAGLEHARVFLEPVKEAYPW-----ITYADLWTLAGVVAIE 103
                 5778888888888889**************************************************************.....**************** PP

                 CTT--..--EE---S-SSGGGS-S....-.-TS-HHHHHHHHHHHT--HHHHHHHHGGGGC-EESHH...........SS-GGGT....HHS....... CS
  peroxidase  89 laggplvpvslGRrDatessasev.snlPdptasvdelrdkfarkgltdeelvaLsGaHtiGkahcssfsrlyaaadpaldaayaaekCasgntelvdl 186
                 ++ggp++p++ GR+D  ++s+      lPd  + +++lr  f r+g++d+e+vaLsGaH +G++h     r           +++           + +
  KHJ33146.1 104 EMGGPSIPWKGGRTDYVDDSKLPPrGRLPDAAQGAEHLRFIFYRMGFNDQEIVALSGAHNLGRCHMD---RS----------GFE----------GAWV 179
                 *****99**************777799**************************************43...22..........222..........2344 PP

                 .EETS-STHHHHHHCC........................T-EEEHHHHHHHHSCCCHHHHHHCCC- CS
  peroxidase 187 dtptkfdnsyfknlle........................krgllrsDqvllsdsetralvekyaes 229
                 ++pt+f+n+yf+ ll+                        + ++l++D +l +d e+r++ve ya++
  KHJ33146.1 180 NNPTRFSNQYFRLLLSlqwlkkklsngveqyvnydedsetELMMLPTDIALTQDHEFRKWVEIYARD 246
                 589*************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2519.86
//
Query:       KHJ33147.1  [L=343]
Description: putative 8-amino-7-oxononanoate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.5e-31  108.3   0.0    5.1e-31  108.1   0.0    1.0  1  Aminotran_1_2  Aminotransferase class I and II


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.1   0.0   2.9e-35   5.1e-31      53     361 ..       2     314 ..       1     316 [. 0.91

  Alignments for each domain:
  == domain 1  score: 108.1 bits;  conditional E-value: 2.9e-35
                    HHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEEESS-THHHHHHHHTTSE.EEEEEBEETTTTEE-HHHHHHHHTTHHCTTE CS
  Aminotran_1_2  53 lakflgrseklklkreaavvvgsGagaliealifllklnpgdeilvpdptyasyknilrlsgge.vvryplyseedfhldlealeealkeapegnk 147
                    la+f+         + +a+++ sG++a+ ++++ + +  +gd+i+ ++  +as++++l+ls+++   +++       h+ l +l ++++++ + ++
     KHJ33147.1   2 LAEFHE--------APSALLFNSGFDANTSLFACIPQ--KGDVIIYDAYIHASVHEGLKLSRATkKCSFN-------HNSLSHLRNLISDQIQLEP 80 
                    678888........666*********98877666665..*************************999***.......*************999999 PP

                    ......TEEEEEEESS-TTT--B--HHHHHHHHHHHHHT.TEEEEEEETTTTCBSSSSHTHHH.HGGSTTSTTEEEEEESSSTTSSGGG-EEEEEE CS
  Aminotran_1_2 148 ......ktkvilvesphNPtGtvatleeleklldlakky.nlllfvDeaYagfvfgsldavat.ranveeepnllivgslsKafGlaGeRvGyilg 235
                          k  +++ve  ++++G++a+l e+ +l++    + n +l+vDea++ + +g+ +   +  ++++ ++  + + +++Ka+++ G   + il+
     KHJ33147.1  81 glvdgsKSIFVAVEALYSMDGDMAPLREIIELVEKSFPQgNSYLIVDEAHSNGIYGENGRGLVhSLGLQGKIF-ARLHTFGKALACNG---AVILC 172
                    ********************************98765555****************77433434666666665.9*************...***** PP

                    EHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHHS..............TEEEECCSCSSEEEEEETHH CS
  Aminotran_1_2 236 naavvsqlrklsrpflsssllqaavaaalsdallkqs..eleemrqrlqkrrkelrdeLael..............glkvlasqsgmflltdlsae 315
                    +  v+++l + + pf++++++++  + a++++   ++   ++   ++l+++ ++l+d+L  l               ++  ++ s +f+l   +++
     KHJ33147.1 173 DNLVREYLINYAKPFIYTTSMSYPSLVAIKTVYTLMRqgTTQPLISHLKTLIDYLFDQLSLLspftthpitkdvllSIPLKIPLSPIFPLLTPNPY 268
                    *****************9999999999999998888867888999**************666********************************** PP

                    CHHHHHHHHHHTCTEEEEEGGGGTS...TTEEEEEC.TTS-HHHHHHHHH CS
  Aminotran_1_2 316 takelskkLleevgvyvtpgtsftv...pgrlRitv.Aglteeeleelve 361
                       +l+  ++   g++v+++ ++tv   ++r+Ri++ +g t +e+++lv+
     KHJ33147.1 269 ---DLASHCQAA-GYLVRAIMPPTVpigTQRIRICLhSGNTFKEVDNLVH 314
                    ...*********.**********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       327  (0.0182386); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2399.92
//
Query:       KHJ33148.1  [L=1282]
Description: putative sister chromatid cohesion and dna repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-05   23.4   0.8      0.033   14.4   0.0    5.1  5  HEAT      HEAT repeat
     0.0015   17.9   0.7      0.014   14.7   0.0    2.8  3  Gcn1_N    Generalcontrol nonderepressible 1 (Gcn1) N-terminal
  ------ inclusion threshold ------
      0.013   15.9   0.1       0.34   11.3   0.0    3.4  2  HEAT_2    HEAT repeats
      0.069   12.9   0.0       0.24   11.2   0.0    2.0  1  Rtt106_N  Histone chaperone Rtt106 N-terminal domain
       0.17   12.4   2.0        1.3    9.6   0.0    3.5  4  HEAT_EZ   HEAT-like repeat
        0.2   11.2   2.8       0.61    9.6   0.0    3.2  5  NopRA1    Nucleolar pre-ribosomal-associated protein 1


Domain annotation for each model (and alignments):
>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.97   2.9e+03       7      31 .]      72      96 ..      71      96 .. 0.85
   2 ?    2.2   0.0     0.093   2.8e+02       2      27 ..     337     362 ..     336     363 .. 0.87
   3 !   14.4   0.0   1.1e-05     0.033       4      28 ..     463     487 ..     460     490 .. 0.87
   4 ?   -1.9   0.0       1.9   5.8e+03       4      29 ..     789     814 ..     788     815 .. 0.83
   5 ?   -1.3   0.0       1.3   3.7e+03       1      13 [.    1123    1136 ..    1123    1138 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.97
                HHHT-SSHHHHHHHHHHHHHHHHCS CS
        HEAT  7 kllsDpspeVReaAakaLgalaevl 31
                +ll + +  VR+ +a +L+++++++
  KHJ33148.1 72 NLLGHRDKGVRAFTACCLVDILKIC 96
                6778888899999999****99987 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.093
                 HHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgal 27 
                 +P l + l  ++ + R  A ++Lg++
  KHJ33148.1 337 IPQLEQELFADDVQLRLLATETLGDI 362
                 899988888999999*********99 PP

  == domain 3  score: 14.4 bits;  conditional E-value: 1.1e-05
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                  l + l+D++ +VR +A+ka+g ++
  KHJ33148.1 463 SLAEKLNDSDEKVRLSAVKAVGGFS 487
                 678889***************9875 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 1.9
                 HHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgalae 29 
                 ++++++s ++pe+ +a++k L++l++
  KHJ33148.1 789 AIIQNISEKHPEIFQASLKELCKLIQ 814
                 68889999999999999998888765 PP

  == domain 5  score: -1.3 bits;  conditional E-value: 1.3
                  HHHHHHHHH.T-SS CS
        HEAT    1 llPlllkll.sDps 13  
                  ++P ll++l ++p+
  KHJ33148.1 1123 IFPRLLHMLaHHPD 1136
                  78******978887 PP

>> Gcn1_N  Generalcontrol nonderepressible 1 (Gcn1) N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.26   7.8e+02      45     146 ..      39     139 ..      34     145 .. 0.66
   2 !   14.7   0.0   4.6e-06     0.014      66     135 ..     416     485 ..     408     517 .. 0.85
   3 ?   -2.7   0.1       0.9   2.7e+03      64      97 ..     784     817 ..     770     842 .. 0.51

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.26
      Gcn1_N  45 vsalakhltfllksgvevpkkvvdaivkGladkKp......pvRrlwalrvGevlwnleee.llsssvaaskfaeavlpkLektlkevvanPlpaaqsg 136
                 +++l+k+l  l +++ ev k+ +++++k+la + +       vR  +a+++ ++l  ++++   ++s      ++++++ +++++  + +nP  a  ++
  KHJ33148.1  39 LETLSKELIDLSDEQEEVHKTSLSKVAKELAGQNLlghrdkGVRAFTACCLVDILKICAPDaPFTPS-----QLKEIFTLFITSILPALSNPSHAYNQQ 132
                 6789999999999999999999999999998876633222346777777777777777765333333.....367777777777777777777655554 PP

      Gcn1_N 137 lvseayvvla 146
                      yv+ +
  KHJ33148.1 133 H---KYVLAS 139
                 4...555555 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 4.6e-06
      Gcn1_N  66 vvdaivkGladkKppvRrlwalrvGevlwnleee.llsssvaaskfaeavlpkLektlkevvanPlpaaqs 135
                 v++++    +dk + +R  w+++vG +l +++    lss++ +++f++++++kL ++ ++v  +++ a+ +
  KHJ33148.1 416 VYQSFFSRKNDKSVVIRSSWTTAVGRILVTAAGGiGLSSNE-EKSFVKSLAEKLNDSDEKVRLSAVKAVGG 485
                 566666677999********************997555554.799************99999888887765 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 0.9
      Gcn1_N  64 kkvvdaivkGladkKppvRrlwalrvGevlwnle 97 
                 +++++ai++ +++k p +  + + ++++++++ +
  KHJ33148.1 784 SATANAIIQNISEKHPEIFQASLKELCKLIQANA 817
                 3344444444444444444444444444444444 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.52   1.5e+03       2      27 ..     338     362 ..     317     371 .. 0.71
   2 ?   11.3   0.0   0.00011      0.34      31      58 ..     459     486 ..     437     552 .. 0.59

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.52
      HEAT_2   2 daLlqalendpdpevrraairaLgri 27 
                 ++L q l    d ++r  a ++Lg+i
  KHJ33148.1 338 PQLEQEL-FADDVQLRLLATETLGDI 362
                 5556666.566666666666666654 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00011
      HEAT_2  31 ealpaLvellededpavRraaaeaLgai 58 
                 + ++ L e l+d+d+ vR  a++a g +
  KHJ33148.1 459 SFVKSLAEKLNDSDEKVRLSAVKAVGGF 486
                 4477777777777777777777777744 PP

>> Rtt106_N  Histone chaperone Rtt106 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   8.1e-05      0.24       1      38 [.     666     703 ..     666     710 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 8.1e-05
    Rtt106_N   1 MteSFldkLPaeLrskvskItsvlPdSlSiFqelYnfA 38 
                 Mt+  +    a L   +   t+vlPdS  i q+l  fA
  KHJ33148.1 666 MTDKNIKEVKAKLELPIKWFTKVLPDSIAIDQDLHKFA 703
                 56666666666777778889*****************9 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.3   6.8e+03      23      52 ..      58      89 ..      49      89 .. 0.78
   2 ?   -2.9   0.1       3.6   1.1e+04      17      34 ..     200     217 ..     192     220 .. 0.78
   3 ?   -1.0   0.1      0.91   2.7e+03      23      53 ..     330     360 ..     327     362 .. 0.67
   4 ?    9.6   0.0   0.00042       1.3      10      53 ..     438     484 ..     436     484 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.3
     HEAT_EZ 23 qplvpeilpaLl..alLnddsdeVRaaAagaL 52
                ++ ++++ ++L+  +lL + ++ VRa +a +L
  KHJ33148.1 58 KTSLSKVAKELAgqNLLGHRDKGVRAFTACCL 89
                56667777888888999999999999999887 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3.6
     HEAT_EZ  17 gepellqplvpeilpaLl 34 
                 ++  l +++v++i++++l
  KHJ33148.1 200 EAQSLPSGVVDVIVAQFL 217
                 566777889*******98 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.91
     HEAT_EZ  23 qplvpeilpaLlalLnddsdeVRaaAagaLg 53 
                 +p+++ ++p+L + L  d+   R  A  +Lg
  KHJ33148.1 330 PPVLQNVIPQLEQELFADDVQLRLLATETLG 360
                 5677888888885555555577777777777 PP

  == domain 4  score: 9.6 bits;  conditional E-value: 0.00042
     HEAT_EZ  10 aLGr...laggepellqplvpeilpaLlalLnddsdeVRaaAagaLg 53 
                 a+Gr    a+g+  l + + +  ++ L+  Lnd++ +VR  A+ a g
  KHJ33148.1 438 AVGRilvTAAGGIGLSSNEEKSFVKSLAEKLNDSDEKVRLSAVKAVG 484
                 6677666666888888889999********************99865 PP

>> NopRA1  Nucleolar pre-ribosomal-associated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00021      0.61      58     103 ..      98     141 ..      46     161 .. 0.66
   2 ?   -3.8   0.0       2.6   7.7e+03      19      49 ..     329     358 ..     324     361 .. 0.82
   3 ?   -2.6   0.0       1.1   3.3e+03     129     188 ..     682     744 ..     666     751 .. 0.60
   4 ?   -1.2   0.0      0.42   1.3e+03       4      51 ..     790     837 ..     788     861 .. 0.67
   5 ?   -3.6   0.1       2.3   6.7e+03      18      58 ..     967    1009 ..     960    1041 .. 0.60

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00021
      NopRA1  58 seeeekeprlpslialflaralriltnPehplYekvnrfllsrpel 103
                  + + +  +l  + +lf++ +l++l+nP+h  Y++ ++++l++   
  KHJ33148.1  98 PDAPFTPSQLKEIFTLFITSILPALSNPSH-AYNQQHKYVLAS-LT 141
                 455556688*******************98.599999999984.44 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2.6
      NopRA1  19 Alavlskllasleesssfkektqlllllsel 49 
                 +  vl++++ +le++  f +  ql ll +e 
  KHJ33148.1 329 SPPVLQNVIPQLEQEL-FADDVQLRLLATET 358
                 5568999999999999.99999999998775 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 1.1
      NopRA1 129 rsWiLrlladGlrtksDlkll...krrrvfelllslynspllda.klrelilelllratriegg 188
                 ++W+ ++l d++  ++Dl+ +   + r    +ll +   p +d   + + i el  r+++ + +
  KHJ33148.1 682 IKWFTKVLPDSIAIDQDLHKFaklHDR-RSYQLLRFAIDPRSDFiTVYKAIKELTKRIQSNQTA 744
                 569999999999999999966332222.333444444444444334555555555555555555 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.42
      NopRA1   4 lvlsLssedeeirrlAlavlskllasleesssfkektqlllllselle 51 
                 ++ + s +++ei +++l+ l kl+++  +s++ ++   ++  l++l  
  KHJ33148.1 790 IIQNISEKHPEIFQASLKELCKLIQANAPSNTKPNDVAIVETLKSLAL 837
                 6778999*****************999988853344444444444444 PP

  == domain 5  score: -3.6 bits;  conditional E-value: 2.3
      NopRA1   18 lAlavlskllasleesssfkektqlllllselletllask....s 58  
                  +A+++l + l s+e+++  +  + l + + +ll+tl++++    +
  KHJ33148.1  967 YAIKILVSRLRSIETNE--ETAKALAIPVFRLLNTLIEKNgeisK 1009
                  67777777777777666..44555566666666666655544431 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       873  (0.0486921); expected 358.6 (0.02)
Passed bias filter:                      660  (0.0368119); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.86u 0.33s 00:00:01.19 Elapsed: 00:00:00.47
# Mc/sec: 8239.17
//
Query:       KHJ33149.1  [L=361]
Description: putative protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.6e-48  163.4   0.0    9.9e-47  159.5   0.0    2.0  2  Pkinase         Protein kinase domain
    8.5e-28   97.3   0.0    1.8e-27   96.3   0.0    1.5  1  Pkinase_Tyr     Protein tyrosine kinase
     0.0028   17.0   0.2        1.3    8.3   0.1    2.2  2  Kinase-like     Kinase-like
      0.008   15.0   0.0      0.014   14.2   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase
  ------ inclusion threshold ------
      0.024   14.0   0.2      0.036   13.4   0.2    1.2  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.033   1.2e+02       4      21 ..      26      43 ..      23      50 .. 0.81
   2 !  159.5   0.0   2.8e-50   9.9e-47      21     264 .]      72     347 ..      68     347 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.033
                EEEEEEESSEEEEEEEET CS
     Pkinase  4 leklGeGsfGkVykavek 21
                l+ +GeG+f++V+ a+++
  KHJ33149.1 26 LQLIGEGTFSRVILATSA 43
                689*********999854 PP

  == domain 2  score: 159.5 bits;  conditional E-value: 2.8e-50
                 TTTTEEEEEEEEECHCHCHHHH....HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH.HHSS--HHHHHHHHHHHHHHHHHH CS
     Pkinase  21 ketgkivAvKkikkekakkkke....kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladlle.rkgslseeeakkiakqilegleyl 114
                 k+++k vAvK+ +   +  ++      ++ rEi+ilk ++hp iv+l+ +  e+++ +l+l+y++gg+l+++ + ++ +l ++ +++i+++++++++yl
  KHJ33149.1  72 KKSDKLVAVKICEYVANGCESGnfmeISAKREIEILKDINHPSIVHLKAWSIEETRTILILDYCPGGDLFKVASeHHDILVPDLVRRIFAELVAAVQYL 170
                 68899*******9999988776778799**********************************************5555699****************** PP

                 HHTTEE-SS-SGGGEEEE.T.....TTE..........EEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCB.SHHHHHHHHHHHHHHHHHSS-S CS
     Pkinase 115 HskgiiHrDlKpeNiLid.e.....kge..........lKitDFGlakelessskltsfvgtseYlAPEvlkeney.skkvDvWslGvilyelltgkpp 196
                 H+++i+HrD+K eNiL++ +     + +          + ++DFGl+++++ ++klt  +g+ +Y APEv+ +++y ++ +D WslGv+ly ll  + p
  KHJ33149.1 171 HARKIVHRDIKLENILVNlSyhdleR-QqdwskypfsvVTLSDFGLSQRIDDDEKLTISCGSDDYAAPEVIMGQPYdGRVTDAWSLGVLLYALLESRLP 268
                 ******************65555551.15677788888**************************************9999******************* PP

                 TTTSSHHHHHHHHHHT.HHHHHHHCT........SHH...HHHTTS...........-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 197 fsgekgkekvekeldq.lekilkilg........etkeklpeasei...........seeakdllkkllkkdpkkRltaeellqhpyl 264
                 f    +++k+++ + +  + i+++          +                        e   l+++ l +  ++R++ +++ + +++
  KHJ33149.1 269 FDPAPHTSKNSRPCSRtSHLIARVEWrwfkyadpTA---------QlqndpkdscrhALEGAILITEGLLRRARDRWSLDQIARTEWV 347
                 **8877777777666633444444335554443322.........1334555556777777788888888899999999999999985 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.3   0.0     5e-31   1.8e-27       7     203 ..      29     266 ..      24     287 .. 0.80

  Alignments for each domain:
  == domain 1  score: 96.3 bits;  conditional E-value: 5e-31
                  EEEESSEEEEEEEEET.........................TTTSSEEEEEEEEESTTSSHHHHHHHHH.....HHHHHHTS-BTTB--EEEEEESSS CS
  Pkinase_Tyr   7 lGeGafGkVvegtlkg.........................ekekkevkVavKtlkeeateeekeelle.....eakimkklkhpnivkllgvctkee 74 
                  +GeG+f++V+ +t                            e++k++  VavK+++  a+  e+ +++e     e++i+k+++hp iv+l ++ ++e 
   KHJ33149.1  29 IGEGTFSRVILATSAIsdevsfngrhlvnqhlkplphkpfsERKKSDKLVAVKICEYVANGCESGNFMEisakrEIEILKDINHPSIVHLKAWSIEET 126
                  5566666665555544455555555566666666666666678899999******9888888888887544455************************ PP

                  SEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE...............TTEEEE-STTTHEETTTSS CS
  Pkinase_Tyr  75 pllivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse...............nkvvkisDfGLardiekdd 157
                  +++++++y++gGdL k   ++ ++ l  + + ++ +++ ++++yL+++k+vHrd+   N+L++                 +vv +sDfGL+++i +d+
   KHJ33149.1 127 RTILILDYCPGGDLFKVASEH-HDILVPDLVRRIFAELVAAVQYLHARKIVHRDIKLENILVNLsyhdlerqqdwskypFSVVTLSDFGLSQRIDDDE 223
                  *****************9999.555555555578899**************************88999********99999*************6665 PP

                  EEEETTSSTSGGGGS-HHHHHHSEEEHH.HHHHHHHHHHHHHHTTSS CS
  Pkinase_Tyr 158 eyvkkeeaklpvkWmapEslkekkftsk.sDvWsfGvllwEiftlge 203
                  + + +     +  + apE+++ + +  + +D Ws Gvll+ +++ ++
   KHJ33149.1 224 KLTIS---CGSDDYAAPEVIMGQPYDGRvTDAWSLGVLLYALLE-SR 266
                  55544...45568***********985439**********9987.44 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.1   0.00036       1.3     145     177 ..     156     187 ..     138     191 .. 0.81
   2 !    6.5   0.0    0.0013       4.6     231     269 ..     250     285 ..     246     294 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00036
  Kinase-like 145 arlllTlqlirlaanLqakglvhgkftvdnlll 177
                   r +  ++l+  +++L+a+ +vh +++ +n+l 
   KHJ33149.1 156 VRRIF-AELVAAVQYLHARKIVHRDIKLENILV 187
                  55555.899*********************985 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0013
  Kinase-like 231 ldaWqlGlviyriwclklPltlateeakeewkfklckki 269
                  +daW lG+  y +    lP++ a    k++   ++c + 
   KHJ33149.1 250 TDAWSLGVLLYALLESRLPFDPAPHTSKNS---RPCSRT 285
                  8*******************9776666555...666655 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   3.8e-06     0.014     312     364 ..     160     221 ..     155     251 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.8e-06
  Pkinase_fungal 312 lrDaIkghrsLflkagiLHrDiSenNilit.........dskke....gerkglLiDLDlakelsd 364
                     +++ +++ + L+   +i+HrDi  +Nil++         +   +    +     L+D+ l   ++d
      KHJ33149.1 160 FAELVAAVQYLH-ARKIVHRDIKLENILVNlsyhdlerqQ---DwskyPFSVVTLSDFGLSQRIDD 221
                     5677899999**.****************96666553331...23333555555666666666655 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2     1e-05     0.036     103     154 ..     138     190 ..      99     199 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1e-05
         Kdo 103 qdLedllakwae.laeelkrallkavgrliaklhragvnHadlyaknillqqe 154
                  dL +++ ++++ l   l r+++ ++ ++++ lh++++ H+d+   nil++  
  KHJ33149.1 138 GDLFKVASEHHDiLVPDLVRRIFAELVAAVQYLHARKIVHRDIKLENILVNLS 190
                 5788888888888888999999999999*********************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       309  (0.0172346); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2632.51
//
Query:       KHJ33150.1  [L=542]
Description: hypothetical protein EV44_g6017 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.049   14.0   0.0       0.16   12.3   0.0    1.9  1  ATG_C      Autophagy-related protein C terminal domain
       0.21   11.9   2.6        1.4    9.3   0.0    2.7  2  Corazonin  Pro-corazonin


Domain annotation for each model (and alignments):
>> ATG_C  Autophagy-related protein C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.8e-05      0.16       5      46 ..     120     161 ..     118     174 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.8e-05
       ATG_C   5 asqPedlreGlqqAysslskglksaaqtilavpsevaeskga 46 
                 ++qP+ +re l+ A+ +l+++++s+ +++ +v+s+ + +++ 
  KHJ33150.1 120 KEQPTPMRESLALAMGNLKTQVSSTNTDFSKVKSRSEPKSDE 161
                 79******************************9987766544 PP

>> Corazonin  Pro-corazonin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00015       1.4      28      51 ..      31      54 ..       5      71 .. 0.86
   2 ?    1.2   0.8     0.051   4.5e+02      68     115 ..     142     187 ..     128     204 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00015
   Corazonin 28 hrlndlglsdlydlqdkssdrrLe 51
                  ++  ++ dlyd+ d++ drrL 
  KHJ33150.1 31 STTSKSSFNDLYDVSDNEEDRRLR 54
                4567789***************97 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.051
   Corazonin  68 rsvalnlaredsdsedsseerslnlnnnnnvlnslspkkrnhqsnelf 115
                 +s+++  ++++s+se++  + ++++ +++   +    ++r +q+n l 
  KHJ33150.1 142 SSTNTDFSKVKSRSEPK--SDENKVLGEDTGIKARRSQRRMRQTNTLT 187
                 33444444444444444..44445556789999999999999999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (542 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       657  (0.0366445); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3902.43
//
Query:       KHJ33151.1  [L=960]
Description: putative ddt domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-27   96.2   1.6    1.5e-26   92.9   0.0    3.1  3  WAC_Acf1_DNA_bd  ATP-utilising chromatin assembly and remodel
    1.9e-16   60.4   0.2    1.9e-16   60.4   0.2    2.9  3  WSD              Williams-Beuren syndrome DDT (WSD), D-TOX E 
    5.1e-16   58.7   4.4    9.4e-16   57.9   4.4    1.5  1  DDT              DDT domain
    9.2e-10   37.8   0.1    2.2e-09   36.6   0.1    1.6  1  WHIM1            WSTF, HB1, Itc1p, MBD9 motif 1
  ------ inclusion threshold ------
      0.091   13.0   0.2       0.35   11.1   0.1    2.1  2  Gluconate_2-dh3  Gluconate 2-dehydrogenase subunit 3
       0.17   12.0   4.8       0.26   11.4   3.6    1.9  2  DUF4517          Domain of unknown function (DUF4517)


Domain annotation for each model (and alignments):
>> WAC_Acf1_DNA_bd  ATP-utilising chromatin assembly and remodelling N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.9   0.0     5e-30   1.5e-26      22     101 .]       1      80 [.       1      80 [. 0.98
   2 ?    0.9   0.0      0.21   6.4e+02      15      51 ..     387     424 ..     384     439 .. 0.72
   3 ?   -2.8   0.4       3.2   9.5e+03      47      76 ..     679     710 ..     674     721 .. 0.68

  Alignments for each domain:
  == domain 1  score: 92.9 bits;  conditional E-value: 5e-30
  WAC_Acf1_DNA_bd  22 ldlykqkvftceitgksnltyfeAlesEkeaskeleekfpealkkpvlelvqfstrsrlddLvedvyeelkerffvgEeV 101
                      +++ykq++f c+itg+s+l++feAl+sE++ ++e+ee+fpealk p+l+ vqf+t+sr+d+Lv+ +yee++ ++++gE V
       KHJ33151.1   1 MEFYKQRRFICQITGHSGLSFFEALKSEQAGAQEVEEAFPEALKGPILRRVQFQTISRIDSLVDLIYEEFRADYYPGEIV 80 
                      689***************************************************************************87 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.21
  WAC_Acf1_DNA_bd  15 yeeylerldlykqkvftce.itgksnltyfeAlesEke 51 
                      +++++e ++l +++v++ce +t+ ++   +  +esE++
       KHJ33151.1 387 FDDFVEAMQLSSEHVYECElFTEIHCAVLKMLVESEQD 424
                      6899***************4344455555555566665 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 3.2
  WAC_Acf1_DNA_bd  47 esEkeaskeleekfpealkk..pvlelvqfst 76 
                      ++E++++ +l++k p++ ++  +vl+ +q+++
       KHJ33151.1 679 QQERKDNSQLDSKRPKNARQyaKVLKEIQKKQ 710
                      67889999999999988875225565555544 PP

>> WSD  Williams-Beuren syndrome DDT (WSD), D-TOX E motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1         1   3.1e+03      63      63 ..     252     252 ..     185     297 .. 0.52
   2 ?   -2.9   0.2       3.2   9.6e+03      44      44 ..     678     678 ..     638     714 .. 0.57
   3 !   60.4   0.2   6.3e-20   1.9e-16       2      96 ..     734     857 ..     733     860 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1
         WSD  63 g 63 
                 +
  KHJ33151.1 252 N 252
                 2 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3.2
         WSD  44 e 44 
                 +
  KHJ33151.1 678 N 678
                 1 PP

  == domain 3  score: 60.4 bits;  conditional E-value: 6.3e-20
         WSD   2 rlkpLGkDRfyrrYwlfd..................kgtgrlfveepsegdievllekre..........ekesekrr.eeeeeeevleegewavyssk 71 
                 r++ LG+DRf +rY++f+                  + +g +++++p + + e   e +           + ++ +r+ +ee+ ++v++  +w +y+++
  KHJ33151.1 734 RTRILGRDRFWNRYFWFErngmpygglpdsstahadYANGCIWIQGPGDLEREGFIEMKGeqqneylkkfKMTVPERKkTEEGLTSVYNLYQWGYYEDP 832
                 6789********************************9999999999988776655544445678999999666666777999999************** PP

         WSD  72 eqleeLiesLnprgvREsaLkeale 96 
                 e ++eLi++L+ rg  E++L+++l+
  KHJ33151.1 833 EAVDELIAWLDIRGSNEQKLHKELK 857
                 ***********************97 PP

>> DDT  DDT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9   4.4   3.2e-19   9.4e-16       2      59 ..     362     420 ..     361     421 .. 0.92

  Alignments for each domain:
  == domain 1  score: 57.9 bits;  conditional E-value: 3.2e-19
         DDT   2 dfgdlLmvweFLhvFgelLgLspftlddlesALlsqdpmgp.seLlaeihiaLLkallr 59 
                 +++ +L++w+ L+vF+e+L L++ft+dd+++A++ +++    +eL++eih+a+Lk+l++
  KHJ33151.1 362 SVSGFLETWDLLNVFCEVLVLDSFTFDDFVEAMQLSSEHVYeCELFTEIHCAVLKMLVE 420
                 67889*****************************88875559**************985 PP

>> WHIM1  WSTF, HB1, Itc1p, MBD9 motif 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.6   0.1   7.3e-13   2.2e-09       4      46 .]     541     583 ..     541     583 .. 0.97

  Alignments for each domain:
  == domain 1  score: 36.6 bits;  conditional E-value: 7.3e-13
                 -GGG-CCCCCSTCCCS-HHHHHHHHHHHHHHHCCC-CCHHHHH CS
       WHIM1   4 dpllpdeLakggYyeLspeeklkiLkiLcdlllsssavReeie 46 
                 d+++++e+ak++Y++L+++ ++k+L iLc l +++ a+R+++e
  KHJ33151.1 541 DQEPTPETAKKEYSNLNVNLRIKALEILCLLIVDTQAIRNYME 583
                 67899*************************************8 PP

>> Gluconate_2-dh3  Gluconate 2-dehydrogenase subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       3.5     1e+04      23      61 ..     441     479 ..     435     491 .. 0.75
   2 ?   11.1   0.1   0.00012      0.35      66     132 ..     786     844 ..     781     846 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 3.5
  Gluconate_2-dh3  23 gakeagvaafidrqladaplppeqeayrkglaaldayar 61 
                      ++ e+g ++ i   + +  l+p++++ r ++a +++ + 
       KHJ33151.1 441 SDNELGEPKSILTTISEPDLEPKRRTTRSSMAMIEQSSS 479
                      556677777777777777888889999999999998765 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00012
  Gluconate_2-dh3  66 ksFveldgaqqdalLealekeaeakgtgealeasaeahfFsllreltlegyftspigggnalgwrli 132
                      + F e++g+qq ++L++++       + +    ++ ++  + + +l  +gy+ +p ++ + ++w  i
       KHJ33151.1 786 EGFIEMKGEQQNEYLKKFKMTVP---E-R----KKTEEGLTSVYNLYQWGYYEDPEAVDELIAWLDI 844
                      78*****************8832...2.2....223456899***************9999***776 PP

>> DUF4517  Domain of unknown function (DUF4517)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   3.6   8.6e-05      0.26      37     111 ..     173     252 ..     170     259 .. 0.73
   2 ?   -3.4   0.0       3.3   9.7e+03      54      89 ..     394     430 ..     385     437 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 8.6e-05
     DUF4517  37 khrYeieftlpknllk..eldgelgasvsaepvpnlnlrilev...ktkeedglevtlelkahkekllkeelllaseedk 111
                 +++Y+i++++p++ll   +++ +++++ +++++pn+  +  +    + ++  + e+++ l ++k k   ++ +++s++++
  KHJ33151.1 173 AKKYHIDIRIPHHLLFknKANEKKNKVNQTKKTPNIDGKAYNSqkkSIQNGRHSELKVILETQKSKQNLDHQQVKSKKQN 252
                 689***********543477777778889999999999998886553444467777777777777766666666666555 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 3.3
     DUF4517  54 ldgelgasvsaepvpnlnlrilev.ktkeedglevtl 89 
                 ++ +++ + ++e    +++ +l++  ++e+dg ++ +
  KHJ33151.1 394 MQLSSEHVYECELFTEIHCAVLKMlVESEQDGGKILV 430
                 4555666677777777888887776555556666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (960 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1695  (0.0945396); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.75u 0.29s 00:00:01.04 Elapsed: 00:00:00.45
# Mc/sec: 6393.45
//
Query:       KHJ33152.1  [L=867]
Description: putative chloride channel protein 5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      1e-88  298.0  27.0      1e-88  298.0  27.0    1.5  2  Voltage_CLC  Voltage gated chloride channel


Domain annotation for each model (and alignments):
>> Voltage_CLC  Voltage gated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.1      0.24   4.2e+03      90     100 ..     177     188 ..     160     193 .. 0.60
   2 !  298.0  27.0   5.8e-93     1e-88       2     353 ..     265     649 ..     264     650 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 0.24
                  HHHHHHHHH.HH CS
  Voltage_CLC  90 lvaaGaAAG.iA 100
                  l+++G+AAG +A
   KHJ33152.1 177 LILTGMAAGtLA 188
                  555565555233 PP

  == domain 2  score: 298.0 bits;  conditional E-value: 5.8e-93
                  HHHHHHHCCCCC-GGGSC-SHHHHHHHCTTSS--..-HHHHHHHHHHHHHHHHCTT-S-BTHHHHHHHHHHHHHHHHHHTT..--SHHHHH.HHHHHH CS
  Voltage_CLC   2 ggllagllvklvapeaagsGipevkaalngvkgp..lslrvllvkflasvltvgsGlslGreGplvqiGAavgsglsrllkl.srndrdrr.lvaaGa 95 
                  +++ a++lvk +a +a+ sGipe+k++l g+ ++  + +++l++k l+++l+v+sG+ lG+eGplv++++++++++ rl+k  ++n++++r +++a+a
   KHJ33152.1 265 FATTASFLVKEYAIYAKHSGIPEIKTILGGFIIRrfMGIWTLIIKSLGLCLAVASGMWLGKEGPLVHVACCCAKMFMRLFKNiNHNEARKReVISAAA 362
                  78899************************************************************************996655999999999****** PP

                  HHHHHHHHT-HHHHHHHHCTTTSTSS--TTHHHHHHHHHHHHHHHHHHCTTS-S......-.T---...--GGGHHHHHHHHHHHHHHHHHHHHHHHH CS
  Voltage_CLC  96 AAGiAAaFnaPlgGvlfalEevsrefslrallpvfvasvvaalvlrlllgeepa......fgeveslfalsllelilfvllGilgGllgalfvrlllk 187
                  A Gi++aF++P+gGvlf+lE++s +f  ++++ +fv+++++a++l+++  + +       ++ v+    ++ +e+i+f+llGi+gG++g+lf++l++k
   KHJ33152.1 363 ATGISVAFGSPIGGVLFSLEQLSYYFPDKTMWQSFVCAMTGAVILQAF--DPFRsgklvmYQ-VTYSNGWHGFEMIPFFLLGIFGGIYGGLFIKLNMK 457
                  ***********************99999********************..333322333333.555558***************************** PP

                  HHHHHHCHHCHHHH.HHHHHHHHHHHHHHHCCCSCC.CSSSSCCHHHHHCTT-S-...............HHHHHH...HHHHHHHHHHHHHCTT-CS CS
  Voltage_CLC 188 verlfrkleklkik.krlepalvgllvgllglllpasvlgggyeliasllegstl...............llsllllllllllkllataltlgsgvpg 269
                  ++ ++++   + ++ +++++a+v+ll++l+ ++    +   + el+ sl++++++                 s +ll+++++l ++++++t+g+++p+
   KHJ33152.1 458 IAMWRKNTS-W-LPdPIIQVAIVALLTALINFPNIY-MRAQSSELLYSLFADCSKvtedqfglcktgsatVSSTILLVFAAILGFFLASITFGLQIPA 552
                  **9888773.3.444788***************988.7778888899999888889999999999999988888999999****************** PP

                  BSHHHHHHHHHHHHHHHHHHHHHH-C............TSSC....HHHHHHCCTHHHHHCCS-HHHHHHHHHHCC--GCCHHHHHHHHHHHHHHHC CS
  Voltage_CLC 270 GifaPsLviGAalGrlvglvlalllp............gaass.dpgafalvGmaaflagvtrapltaiviviEltgdlelllplmlavliAkavad 353
                  Gi++Ps++iGA+ Gr++g ++++++              + ++ +pg++a+vG+aa l+gvtr++++++vi++Eltg+l+++lp+m+av+++k+++d
   KHJ33152.1 553 GIILPSMTIGALSGRAIGILMEIWVRsfpnyflfancePDIPCvTPGTYAVVGAAAALGGVTRMTVSIVVIMFELTGALTYVLPIMIAVMLSKWIGD 649
                  ************************6678899999****889999**************************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (867 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.42
# Mc/sec: 6171.81
//
Query:       KHJ33153.1  [L=71]
Description: putative te1b-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.25s 00:00:00.58 Elapsed: 00:00:00.38
# Mc/sec: 565.49
//
Query:       KHJ33154.1  [L=84]
Description: putative cofilin tropomyosin-type actin-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.1e-26   90.2   0.0    9.4e-26   90.0   0.0    1.0  1  Cofilin_ADF      Cofilin/tropomyosin-type actin-binding prote
  ------ inclusion threshold ------
       0.16   12.5   0.0        0.2   12.3   0.0    1.1  1  Pur_ac_phosph_N  Purple acid Phosphatase, N-terminal domain


Domain annotation for each model (and alignments):
>> Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.0   0.0   1.1e-29   9.4e-26      48     120 ..       4      77 ..       2      78 .. 0.97

  Alignments for each domain:
  == domain 1  score: 90.0 bits;  conditional E-value: 1.1e-29
                  T-EEEEEEEEEECCS.ECCEEEEEEEEE--TTS-HHHHHHHHHHHHHHHHHCTTSEEEEEE-CGGCCSHHHHHH CS
  Cofilin_ADF  48 eprYavydveyehdd.eskrsklvfIswvPdsapikqkmlyasskdalkkelkgisveieatdldelteeelke 120
                   pr+a+yd++ye ++ e+ r+k+vfIsw+Pd+a i+ km+yasskd lk++l+gi+ e++a+d+de++++++++
   KHJ33154.1   4 GPRFAIYDFNYELSSgEGSRNKIVFISWSPDDAAIQAKMIYASSKDGLKRALEGIASEFQANDEDEIEYQSVLK 77 
                  59************999*****************************************************9987 PP

>> Pur_ac_phosph_N  Purple acid Phosphatase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.2e-05       0.2      14      69 ..      25      79 ..      13      82 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.2e-05
  Pur_ac_phosph_N 14 tsmtvsWitpektkksvvrygtssdalestaeatsstyettnyksgyshkatltgL 69
                     + + +sW  ++++ ++++ y+ s+d l+++ e+  s+++  n+++++ ++ +l++ 
       KHJ33154.1 25 KIVFISWSPDDAAIQAKMIYASSKDGLKRALEGIASEFQ-ANDEDEIEYQSVLKNI 79
                     45679******************************9997.5899999998888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (84 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       380  (0.0211947); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.18s 00:00:00.54 Elapsed: 00:00:00.34
# Mc/sec: 748.76
//
Query:       KHJ33155.1  [L=585]
Description: putative heat shock protein 60 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-86  290.8  12.2    3.3e-86  289.9  12.2    1.4  1  Cpn60_TCP1  TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  289.9  12.2   1.9e-90   3.3e-86       1     485 [.      54     555 ..      54     561 .. 0.93

  Alignments for each domain:
  == domain 1  score: 289.9 bits;  conditional E-value: 1.9e-90
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHH....HHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPa....akllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegye 95 
                 la++v+ttlGPkG+++++++++g++++T+DG+t++k++ +++      a+l++++a++++e +GDGTtt+++La+++ +e+ k +aag +p ++++g++
  KHJ33155.1  54 LAKAVATTLGPKGRNVLIESSYGSPKITKDGVTVAKSIVLKDKFenlgARLIQDVASKTNETAGDGTTTATVLARAIFSETVKNVAAGCNPMDLRRGIQ 152
                 799************************************************************************************************ PP

                 HHHHHHHHHHHHHXEEBXSCSTT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHHHCHCCCSEECSCCCEECCCCEECECTTSEEE..SEEEESS--SS CS
  Cpn60_TCP1  96 kalekaleaLkeiaveisseekdreeLlkvartslsskltskeaeelsklvvdAvklieenekeldlgrikvvkieggsledselv..eGlvldkgvls 192
                  a+++++e+L++++++i ++    ee+++va++s++++       +++kl++ A+          ++g+ +v+++++g+ ++ el+  eG+ +d+g++s
  KHJ33155.1 153 AAVDAVVEYLQSNKRDITTS----EEIAQVATISANGD------THIGKLIASAM---------EKVGKEGVITVKEGKTMEDELEvtEGMRFDRGFVS 232
                 *************9999887....9*************......9**********.........79**************65555555*********** PP

                 T.......TSSCEEECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECEEEESS-B-HHHHHHHHHCT-EEE-S-... CS
  Cpn60_TCP1 193 p.......dmpkklenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnvvvcqkgiddlalhflakngilalrrv... 281
                 p       + + ++e++ +ll +++++  ++                        + + le+ +++ +++v+++++id +al+++  n++++  +v   
  KHJ33155.1 233 PyfitdtkSQKVEFEKPLILLSEKKISAVQD------------------------IIPALEASTQLRRPLVIIAEDIDGEALAVCILNKLRGQLQVaav 307
                 *9999765556666*****************........................9******************************************* PP

                 ........-HHHHHHHHHHHT--EBSCG.....GGGGCGC-EEEEEEEECCETTCCEEEEE....................................CE CS
  Cpn60_TCP1 282 ........kkkdlerlakatGatavssl.....edltpeelGtakkveeekigsekttiie....................................ev 331
                         +k+ l +l ++t+at++++      e+ tp+ lG+ +++   +i++e+t+i++                                      
  KHJ33155.1 308 kapgfgdnRKSILGDLGILTNATVFTDEldiklEKATPDLLGSTGSI---TITKEDTIILNgegskdaisqrceqirgiindastsdyekeklqerlAK 403
                 **************************99788888888888*******...***********88888888887777777777766666666655555533 PP

                 SSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHHHHCCCCTSXCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHH CS
  Cpn60_TCP1 332 ksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakklkeyaksvsgeeqlaieafakALevipktLaeNaGldpievlak 430
                 +sg++a+i+++g++++++ e++++  dAln++++a+e e+++pGGG ++l++a++     ks + ++ql+i ++++A++++++t++eNaG+++  v+ k
  KHJ33155.1 404 LSGGVAVIKVGGSSEVEVGEKKDRFVDALNATRAAVE-EGILPGGGTALLKAASQALVDVKSANFDQQLGISIIKNAITKPARTIIENAGIEGSVVVGK 501
                 9************************************.************9988877999999************************************ PP

                 HHHHHHTTXTTEEEETTTTCEEECCCCTXEEEHHHHHHHHHHHHHHHHHHHCEEE CS
  Cpn60_TCP1 431 lraahnkgekelgidvesgeiidlveagvvDplkvkrqalksAteaastiLride 485
                 l+++  ++  + g+d ++ge++d+++ g+vDp+kv+r +l  A+ +as++ +++ 
  KHJ33155.1 502 LMDEFGSDF-NRGYDSAKGEYVDMISTGIVDPFKVVRTGLVDASGVASLLGTTEV 555
                 ***998888.*************************************98766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       527  (0.0293937); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.21s 00:00:00.81 Elapsed: 00:00:00.39
# Mc/sec: 4548.21
//
Query:       KHJ33156.1  [L=155]
Description: putative ubiquitin-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-31  110.3   1.1    1.2e-31  110.1   1.1    1.0  1  Blt1       Blt1 N-terminal domain
      0.004   16.9   0.1      0.006   16.3   0.1    1.4  1  ubiquitin  Ubiquitin family


Domain annotation for each model (and alignments):
>> Blt1  Blt1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.1   1.1   1.3e-35   1.2e-31       1     150 []       6     149 ..       6     149 .. 0.87

  Alignments for each domain:
  == domain 1  score: 110.1 bits;  conditional E-value: 1.3e-35
        Blt1   1 FaksflaalDsrpvklsadhveDprsyparvpytLprlskphpempkkvkkaaapgssksitvhlksarnpalelsldnvalattsvkdlkeavqervk 99 
                 Faksfla+l+s p+k+s+++veDp++yp+r  +tLp++ +p+p+         ++ +++ + vhl s rnp l+ +l++ ++   ++ ++k+++++   
  KHJ33156.1   6 FAKSFLATLNSYPTKISSEYVEDPKKYPLRATFTLPKHTQPQPKKR-----DLKSHTTSVLNVHLISQRNPPLDHTLSSQPINM-TMLEIKNTLSKM-- 96 
                 9**************************************9987544.....34455566799*****************99766.5789******99.. PP

        Blt1 100 eaetkvpldkikiLykkkPvsg.ktlaevlas....esevleggkevElgvmvlgG 150
                       p +kik+L++kkPv + k l+++la      ++ +e g++v+lgvmvlgG
  KHJ33156.1  97 ---IDAPPEKIKLLHNKKPVVDnKQLKDLLATnieqIDTHVEIGDTVNLGVMVLGG 149
                 ...66799************776********94422234567899**********9 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   6.6e-07     0.006      19      57 ..      84     122 ..      57     136 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 6.6e-07
                 SBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGH CS
   ubiquitin  19 dtveelKekiaekegipaeqqrLiysGkvLedertleey 57 
                  t++e+K+ +++  + p+e+++L+++ k+  d++ l+++
  KHJ33156.1  84 MTMLEIKNTLSKMIDAPPEKIKLLHNKKPVVDNKQLKDL 122
                 599**********************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1173.37
//
Query:       KHJ33157.1  [L=385]
Description: hypothetical protein EV44_g0322 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       662  (0.0369234); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2990.46
//
Query:       KHJ33158.1  [L=209]
Description: putative translation machinery-associated protein 20 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-20   74.2   0.2    1.4e-20   73.7   0.2    1.2  1  Pre-PUA   Pre-PUA-like domain
    3.7e-11   42.8   0.3    1.3e-05   25.0   0.0    2.2  2  PUA       PUA domain


Domain annotation for each model (and alignments):
>> Pre-PUA  Pre-PUA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.7   0.2   1.6e-24   1.4e-20       1      87 []       2      93 ..       2      93 .. 0.93

  Alignments for each domain:
  == domain 1  score: 73.7 bits;  conditional E-value: 1.6e-24
     Pre-PUA  1 fkkkfkvksntqlksSdrrkLraklleqfpslseeqleellpkkeevkvvklqgehvelyvvdge.......plffqdregellPtlytlwkyP 87
                fkk+ + +s+t +ksS +r+Lra++++ +p+l  ++++e++pkke+++ +k+  e+v lyv  +        plffq+ +++llP+l++++++P
  KHJ33158.1  2 FKKDISSGSKTRVKSSIQRGLRAQIIQVYPLL-APHIDEIIPKKEQLEALKIP-ERVVLYVLPSTssppvgiPLFFQHMNDTLLPHLKLVHRFP 93
                8999****************************.********************.*******54444566666*********************9 PP

>> PUA  PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   1.5e-09   1.3e-05       2      31 ..      98     127 ..      97     140 .. 0.90
   2 !   15.8   0.2   1.1e-06      0.01      31      72 ..     155     197 ..     151     199 .. 0.88

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 1.5e-09
                 EEEE-HHHHHHHHTT-EEEGGGEEEEETT- CS
         PUA   2 rvvvddgAvkallsgasLlapGvvevegdf 31 
                  v +d+gA++++lsga L+apG+++ +g +
  KHJ33158.1  98 SVRIDRGAIRFVLSGATLMAPGLTSKGGRL 127
                 789*********************988876 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 1.1e-06
                 --TTSEEEEEETT.SCEEEEEEESS-HHHHHHHCTSEEEEEEE CS
         PUA  31 feegdvVaivded.gelvavGlanysseelakikggksveier 72 
                 + +g+ V+i++e+  e++avG+    ++++++  +g++ve  +
  KHJ33158.1 155 LLKGEPVVICAEGkKEACAVGILTSGTKDIKEKGKGPVVEEGH 197
                 558*********769*********************9998655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       264  (0.0147247); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1685.23
//
Query:       KHJ33159.1  [L=744]
Description: putative glyoxal oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.7e-41  140.6   0.0    2.6e-40  138.1   0.0    2.2  2  Glyoxal_oxid_N  Glyoxal oxidase N-terminus
      2e-23   82.5   0.1    3.8e-23   81.6   0.1    1.5  1  DUF1929         Domain of unknown function (DUF1929)
    2.8e-14   53.3  49.7    3.7e-07   30.5  22.7    2.9  2  Chitin_bind_1   Chitin recognition protein


Domain annotation for each model (and alignments):
>> Glyoxal_oxid_N  Glyoxal oxidase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.1   0.0   4.3e-44   2.6e-40      44     240 .]     270     490 ..     242     490 .. 0.86
   2 ?   -1.5   0.0       0.2   1.2e+03      72     132 ..     530     602 ..     528     617 .. 0.55

  Alignments for each domain:
  == domain 1  score: 138.1 bits;  conditional E-value: 4.3e-44
  Glyoxal_oxid_N  44 CtaHsveydvatnavrplkvltdtwcssgalladGtlvqtGGfk..........dgerkvrllspc......eecdwvelke.elaekRwyatnq 121
                      +a s eyd+ +n+  pl+ +t+++cs ga ladG++v+ GG +          dg +++r+l+ +      +   w+e  + +l++ Rwyat q
      KHJ33159.1 270 HYAMSAEYDLGSNQPIPLSYSTNAFCSGGAYLADGRVVSVGGNApldfinptvgDGFKAIRTLNRSpsdrslDGQAWEEPANrKLSTARWYATAQ 364
                     4799**************************************6433333344449********9887786665567**988779*********** PP

  Glyoxal_oxid_N 122 iLpdgrvivvGG...........rrafsyefvpkeekseekavelpfLketedkeennLYPfvhllpdgnlfifankrsilldykknkvvrefpk 205
                     ++pdg+v+v  G            ++ ++e+++++++ + +++ +++L + +      +YPfv+llpdgnlf++  k++ ++++ +n++vr++p 
      KHJ33159.1 365 TMPDGSVFVASGslngldpskpqNNNPTFEMLNRDGSPRGQSIPMDILVKNQ---PYYMYPFVNLLPDGNLFVMVAKQAQVFNVGQNAIVRQLPD 456
                     *********9884444444433335679********************9876...579************************************* PP

  Glyoxal_oxid_N 206 lpggernyPssgssvlLplklkeeaseaevlvCGG 240
                     lpg+ r+yP++g sv+Lpl+  +++ +aev++CGG
      KHJ33159.1 457 LPGEFRTYPNTGGSVMLPLSS-ANNWKAEVVICGG 490
                     ********************5.6799********9 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.2
  Glyoxal_oxid_N  72 galladGtlvqtGGfkdgerkvrllspc.......eecdwv.elkeelaek...Rwy.atnqiLpdgrvivvG 132
                     g+ll+dGt v   G + g++  rl++         ++++ v +  ++la++   R y +   +L dg+v++vG
      KHJ33159.1 530 GTLLPDGTSVWLNGGNRGAQGFRLMANPtlgallyDQTKPVgQRFSTLASSgipRLYhSCALLLLDGTVMIVG 602
                     6677777777777777777777776543344444422221101122333322225441445566777777777 PP

>> DUF1929  Domain of unknown function (DUF1929)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.6   0.1   6.4e-27   3.8e-23       1      96 []     641     743 ..     641     743 .. 0.88

  Alignments for each domain:
  == domain 1  score: 81.6 bits;  conditional E-value: 6.4e-27
     DUF1929   1 RPkissv.ptevkyg.etftvtvsvekeaeevkvslvrpgfvTHsvnmdqRlveLev.....setgytvtvtaPpnanvapPGyymlFvvndgvpSvgk 92 
                 RP+  ++ +++v+ + ++f+++++v + ++++k++l++ g+vTHs++m++R+++L+      ++t+++++v+ Ppn+nvapPG+y+++vv dg+p+vg+
  KHJ33159.1 641 RPSNLAFsTKTVQANgSEFKISCDVPAGTQNIKIALYHGGYVTHSLHMGHRMLFLDNtgfqaGATRQNLNVRGPPNSNVAPPGPYVVYVVADGIPAVGE 739
                 676666645556665599*******99999**************************97766544499******************************** PP

     DUF1929  93 wVkv 96 
                 +V+v
  KHJ33159.1 740 FVQV 743
                 **97 PP

>> Chitin_bind_1  Chitin recognition protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8  19.0   4.3e-10   2.6e-06       1      38 []      81     124 ..      81     124 .. 0.93
   2 !   30.5  22.7   6.3e-11   3.7e-07       1      38 []     167     208 ..     167     208 .. 0.95

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 4.3e-10
                    B-SGGCTT---....STT-EE-TTSBEEBSHHHHS..TT--BS- CS
  Chitin_bind_1   1 eCGkqaggatC....plnvCCSqyGyCGttsdyCg..agCqsnC 38 
                    +CGk+ ++a+C    p ++CCS+ G CG+ts +C+  +gCq +C
     KHJ33159.1  81 RCGKDFNNANCdpfgPYGACCSEDGHCGSTSSHCSslNGCQHGC 124
                    6*********************************54477****9 PP

  == domain 2  score: 30.5 bits;  conditional E-value: 6.3e-11
                    B-SGGCTT---...STT-EE-TTSBEEBSHHHHSTT--BS.- CS
  Chitin_bind_1   1 eCGkqaggatC...plnvCCSqyGyCGttsdyCgagCqsn.C 38 
                    +CG++ +++ C    +++CCS+yG+CG+t+ +Cg+gCq++ C
     KHJ33159.1 167 TCGAKYNNTICgnwVNGNCCSMYGFCGNTDGHCGEGCQNGgC 208
                    6**********888889*********************9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (744 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      208  (0.0116013); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 5513.58
//
Query:       KHJ33160.1  [L=522]
Description: putative cytidine deaminase-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      6e-11   42.1   0.8    3.4e-06   26.9   0.1    2.7  3  dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-
    0.00021   21.1   0.1     0.0015   18.3   0.0    2.1  2  MafB19-deam      MafB19-like deaminase
  ------ inclusion threshold ------
      0.014   15.0   6.5      0.014   15.0   6.5    2.1  2  SR-25            Nuclear RNA-splicing-associated protein


Domain annotation for each model (and alignments):
>> dCMP_cyt_deam_1  Cytidine and deoxycytidylate deaminase zinc-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.1   6.5e+03      75      83 ..      54      62 ..      42      67 .. 0.75
   2 !   13.0   0.1   1.2e-05      0.07       6      70 ..     243     324 ..     239     370 .. 0.90
   3 !   26.9   0.1   5.6e-10   3.4e-06      70      99 ..     425     454 ..     389     456 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.1
                     EEEEE--BH CS
  dCMP_cyt_deam_1 75 lyvtlePCs 83
                     l+ t++PC 
       KHJ33160.1 54 LIHTHFPCD 62
                     56699***7 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 1.2e-05
                      HHHHHHHHHHHHHH.TTTSCSEEEEEEETTEEEEEEESBHHCCTG...............TTB-HHHHHHHHHHHH.TSSCE CS
  dCMP_cyt_deam_1   6 kllelalkaakeaq.kcsnfkVGavivkngeiistgyngepaggs...............ktiHAEvnAilkaakn.ggskl 70 
                      k+++la ++a+e++   +  ++G v+vk+ +  s g   + ag                 + +HA + Ai+ +a+  ++ +l
       KHJ33160.1 243 KWMNLAWTLARESKeSGQGEEIGVVVVKRSKGCSSGRVVTVAGDArwlnwpsehrlvkgnPAAHAVMRAIAMVATAiRHQDL 324
                      7899*********9999999********99**********99999**************************99988665454 PP

  == domain 3  score: 26.9 bits;  conditional E-value: 5.6e-10
                      ETTEEEEEEE--BHHHHHHHHHHT-SEEEE CS
  dCMP_cyt_deam_1  70 legatlyvtlePCsmCakaiiqsgikkvvv 99 
                       +g  +y+t+ePC mC++a+i+s+  +vv+
       KHJ33160.1 425 CHGLEIYCTHEPCIMCSMAMIHSRFTRVVF 454
                      47889***********************98 PP

>> MafB19-deam  MafB19-like deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.11   6.5e+02       6      60 ..     244     314 ..     240     329 .. 0.65
   2 !   18.3   0.0   2.6e-07    0.0015      69     101 ..     424     456 ..     406     503 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.11
  MafB19-deam   6 afrkalaevekatki.kedkigavivkdkkviargsn...............ekelnakataHaEiaalqq 60 
                  +++ a  ++++  +  +++ ig v+vk +k   +g                 ++ ++ ++ aHa + a+  
   KHJ33160.1 244 WMNLAWTLARESKESgQGEEIGVVVVKRSKGCSSGRVvtvagdarwlnwpseHRLVKGNPAAHAVMRAIAM 314
                  66666666666554414678999999999988888877788866666666655555666666666666544 PP

  == domain 2  score: 18.3 bits;  conditional E-value: 2.6e-07
  MafB19-deam  69 rlddatlyvtlepCdmCagaivqaglkklvyga 101
                     ++ +y t+epC mC  a++ ++  ++v+  
   KHJ33160.1 424 LCHGLEIYCTHEPCIMCSMAMIHSRFTRVVFER 456
                  5567889**********************9865 PP

>> SR-25  Nuclear RNA-splicing-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   4.3      0.52   3.1e+03      29      70 ..     116     156 ..     102     160 .. 0.33
   2 ?   15.0   6.5   2.4e-06     0.014      48      82 ..     320     354 ..     294     385 .. 0.49

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.52
       SR-25  29 rsssasksqsrkassasekeeerskekkkkkrrrssssssss 70 
                 ++s a +s+++  +s  + e+e ++e ++    + +ss+++s
  KHJ33160.1 116 SNSQALRSRGE-ICSGIHLETESKRELDQTSLSSDQSSQEDS 156
                 11122222221.112222222222222222222222222222 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 2.4e-06
       SR-25  48 eeerskekkkkkrrrssssssssssssssssssss 82 
                 ++++ k+kkk++ ++++ss ssssss ssss sss
  KHJ33160.1 320 RHQDLKRKKKETVETTNSSISSSSSSFSSSSPSSS 354
                 22333333333333333333333333333222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (522 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       896  (0.0499749); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.39
# Mc/sec: 3988.47
//
Query:       KHJ33161.1  [L=678]
Description: putative annexin anxc4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-09   37.3   3.6    0.00018   21.5   0.1    4.1  4  Annexin    Annexin
  ------ inclusion threshold ------
      0.076   13.2   0.1        9.1    6.5   0.0    2.8  3  DUF2407_C  DUF2407 C-terminal domain


Domain annotation for each model (and alignments):
>> Annexin  Annexin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.21   1.9e+03      17      42 ..     365     390 ..     348     394 .. 0.78
   2 !    7.1   0.5   0.00061       5.5      17      63 ..     447     495 ..     440     498 .. 0.81
   3 !   21.5   0.1     2e-08   0.00018       5      54 ..     523     572 ..     519     583 .. 0.90
   4 !    5.9   0.0    0.0015        14      29      53 ..     627     651 ..     623     653 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.21
                 HHHHHHHHHHSTHHHHHHHHHHHHHH CS
     Annexin  17 ektlieIlatRsnaqlqaifeeYkkk 42 
                    li+Il   ++ ++ + + +Ykk 
  KHJ33161.1 365 MAPLISILPGLTHTEILDLRSQYKKI 390
                 556899999999999********997 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.00061
                 HHHHHHHHHHSTHHHHHHHHHHHH.HHHSS-HHHHHHHHS-HH.HHHHH CS
     Annexin  17 ektlieIlatRsnaqlqaifeeYk.kkygkdLekdIksetsGd.fekll 63 
                  + lie l+ R+n++++ i++ ++ kky ++L   +k e+  d f+k++
  KHJ33161.1 447 RELLIESLIGRTNEEIKLIKDGFRdKKYHNSLTLCLKTELREDkFKKAI 495
                 5679999****************846899***99999888643266665 PP

  == domain 3  score: 21.5 bits;  conditional E-value: 2e-08
                 HHHHHHSSSSSCHHHHHHHHHHSTHHHHHHHHHHHHHHHSS-HHHHHHHH CS
     Annexin   5 lLkkamkglGtdektlieIlatRsnaqlqaifeeYkkkygkdLekdIkse 54 
                 +L+ a+k++   e+++++I+  Rs+ +l++  ++Y+ +y ++  k I ++
  KHJ33161.1 523 ELRNAVKQKRGGETAVMKIILLRSKTHLRELLKAYNLMYERNFAKEILKK 572
                 799****************************************9999765 PP

  == domain 4  score: 5.9 bits;  conditional E-value: 0.0015
                 HHHHHHHHHHHHHHHSS-HHHHHHH CS
     Annexin  29 naqlqaifeeYkkkygkdLekdIks 53 
                  ++ ++i+ e+++ y+ +L+ ++ +
  KHJ33161.1 627 RPHFEKIRSEFRHLYNTELQTAVAE 651
                 58999***************99865 PP

>> DUF2407_C  DUF2407 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0     0.001       9.1      10      33 ..     374     396 ..     371     416 .. 0.78
   2 ?    3.3   0.0    0.0095        85      10      61 ..     456     509 ..     453     559 .. 0.71
   3 ?   -2.1   0.0      0.44   3.9e+03      17      32 ..     631     646 ..     619     656 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.001
   DUF2407_C  10 GfseeeieaLRsqFrsiygseetp 33 
                 G+++ ei +LRsq+++i  ++  +
  KHJ33161.1 374 GLTHTEILDLRSQYKKIVRTT-GK 396
                 9***************99833.33 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.0095
   DUF2407_C  10 GfseeeieaLRsqFrsiygseetpdtmpsdleeeee..eelreLEerWidstan 61 
                 G ++eei+ ++  Fr  + +++ +    ++l e++   + +  LEe+ ++++ +
  KHJ33161.1 456 GRTNEEIKLIKDGFRDKKYHNSLTLCLKTELREDKFkkAIMLVLEEKQMEESPD 509
                 7799***********99988888877888777766544678899*****99873 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.44
   DUF2407_C  17 eaLRsqFrsiygseet 32 
                 e++Rs Fr++y++e +
  KHJ33161.1 631 EKIRSEFRHLYNTELQ 646
                 789******9995543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (678 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       677  (0.0377601); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.38
# Mc/sec: 5285.80
//
Query:       KHJ33162.1  [L=95]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (95 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       275  (0.0153383); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.33u 0.21s 00:00:00.54 Elapsed: 00:00:00.34
# Mc/sec: 825.34
//
Query:       KHJ33163.1  [L=129]
Description: hypothetical protein EV44_g4114 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 954.01
//
Query:       KHJ33164.1  [L=2893]
Description: putative upf0648 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.6e-180  601.1  19.2   1.6e-180  601.1  19.2    2.9  3  Apt1         Golgi-body localisation protein domain
   9.6e-179  596.4  21.4   9.6e-179  596.4  21.4    2.3  2  Fmp27        Mitochondrial protein from FMP27
     6e-151  503.6  20.0     6e-151  503.6  20.0    2.9  3  Fmp27_WPPW   RNA pol II promoter Fmp27 protein domain
    4.2e-57  192.6   0.1    1.6e-56  190.7   0.0    2.2  2  Fmp27_GFWDK  RNA pol II promoter Fmp27 protein domain
      3e-46  157.2   1.4      7e-46  156.0   0.4    2.3  2  DUF2405      Domain of unknown function (DUF2405)
    2.8e-30  105.1   0.5    2.6e-29  102.0   0.1    3.2  2  Fmp27_SW     RNA pol II promoter Fmp27 protein domain
  ------ inclusion threshold ------
       0.57   10.1   4.1        1.6    8.6   0.1    3.1  3  CheZ         Chemotaxis phosphatase, CheZ


Domain annotation for each model (and alignments):
>> Apt1  Golgi-body localisation protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.6   1.9       5.7   1.5e+04     103     142 ..    1835    1876 ..    1823    1926 .. 0.56
   2 !  601.1  19.2  6.3e-184  1.6e-180       1     478 []    2188    2727 ..    2188    2727 .. 0.82
   3 ?   -4.3  10.4       2.4     6e+03     336     391 ..    2763    2818 ..    2732    2885 .. 0.38

  Alignments for each domain:
  == domain 1  score: -5.6 bits;  conditional E-value: 5.7
        Apt1  103 lqerirqleeikehfqiesk.yldkegw.edrlklekelaec 142 
                  lq+++++     ++ +i+++  +++e+  +d+++l+++ +  
  KHJ33164.1 1835 LQKQMKSHILSLRNAEIRASqDIQNEKYrADLEQLKRQYQLF 1876
                  333333333333333333333333333334444444444333 PP

  == domain 2  score: 601.1 bits;  conditional E-value: 6.3e-184
        Apt1    1 vvqrtsaslrydkyntlrlkyndesvsseeeee.......ekrvdelsvefpklratanSsQYyalydivtdLLlysePlekerserlekimlasdf 90  
                  vvq+tsaslrydkyntlrlkynde v se+ +e        +r+d+++vefpk++a++nS+QYya+y+iv+dLL+yseP+ek+r+e leki+lasdf
  KHJ33164.1 2188 VVQKTSASLRYDKYNTLRLKYNDE-VTSETISEnklnpkgINRMDRVWVEFPKVHAICNSAQYYAMYIIVMDLLMYSEPQEKTRNELLEKIILASDF 2283
                  89********************99.5555444469************************************************************** PP

        Apt1   91 sdleglpemvkklqerirqleeikehfqieskyldkegwedrlklekelaeceeeLfllmkaittsqlrkkekskskslsaalrwsisadeivWhll 187 
                  sdl+g+pem+++lqerirqleei+++f ++ + ld+++wed l l++++++ce+eLf++mkaittsq rk+++sk+++l   lrw+i++++i Whl+
  KHJ33164.1 2284 SDLRGVPEMIMTLQERIRQLEEIRTNF-FNLNSLDEKDWEDKLLLDRDINSCENELFFMMKAITTSQ-RKYDTSKTSGL---LRWNIASEQIKWHLM 2375
                  ***********************9998.67888**********************************.9**********...*************** PP

        Apt1  188 dddgeplaelqLknaeydrtdnsdgsnsnrleigslqglNllpnaiypellspy.....edepedkkkpmlrvywkmlepvgGipvlehfevnlfPl 279 
                  +d+ epl+e+qL++aeydrtdn+dgs+ n+++i+++ glNllp+aiype+l+py     +  + d++++mlrvyw+mle+++Gipv++hf v+lfP+
  KHJ33164.1 2376 RDNAEPLLEFQLQRAEYDRTDNYDGSHNNLIQISKITGLNLLPDAIYPEILAPYldingKAFNGDSNQKMLRVYWYMLEAIAGIPVMDHFDVKLFPM 2472
                  **********************************************************9778899******************************** PP

        Apt1  280 kiqLeeevgkklfeYiFPkrdsdaqea...............s..mvkess.......seeddesdeesessssss.....ssssssassssssssr 347 
                  kiqLe+++gkklf+YiFP++d++ q++                  ++k  +       +  d++s+++s+ +++ +     +s  + ++ ++  ss+
  KHJ33164.1 2473 KIQLERDIGKKLFDYIFPGSDNKYQSSfmvekmelikddleeDglNLK--KsinlpkeQ-FDEQSNTNSSFQTE-TverrpESMLNFEQGQNIASSK 2565
                  *********************999999877766655554443033222..022233321.11112111111112.1323342222222222222222 PP

        Apt1  348 ssslelrlkpt................................sstssssssessssssskkrsseesslessaserv.........kssrasddle 403 
                  ++s       +                                s+ts  ++s  ++++s++++ +   s+  s+s+r          k+++ sddl+
  KHJ33164.1 2566 KNS-------KnlgiqsldrqhfrlfqshqmitpglrisskksSKTSDGNNSPIRRTESFQTQHA---SIYDSKSKRFalsrhnsklKIEQSSDDLT 2652
                  222.......0333445567789999999999999999777665555555555555555543332...22222333333444444445556****** PP

        Apt1  404 emksRaskymtfayikipsvvlclSYkgkkeknledvhdlvfrlPtleyrnktwsnldLalalKkdvikallsht 478 
                  +m+ Ras+ymtfa++ki+svvlclSYkgk+e+nled+h+lvfrlP leyrnktwsnldLala+K+dvik+l+sht
  KHJ33164.1 2653 KMMGRASSYMTFANVKINSVVLCLSYKGKSERNLEDIHNLVFRLPDLEYRNKTWSNLDLALAFKRDVIKSLISHT 2727
                  **************************************************************************8 PP

  == domain 3  score: -4.3 bits;  conditional E-value: 2.4
        Apt1  336 ssassssssssrssslelrlkptsstssssssessssssskkrsseesslessase 391 
                  +   + s+  s++s++ +++++t++ s++s+++ sss+ s +rs++ ss  s+ ++
  KHJ33164.1 2763 EAPFDYSDAASSPSASVNKRTSTNERSNNSERSVSSSQNSIQRSHSYSSNISNMKN 2818
                  22222222222222222221222222222222222222222222222222222222 PP

>> Fmp27  Mitochondrial protein from FMP27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  596.4  21.4  3.7e-182  9.6e-179       1     877 []      17     887 ..      17     887 .. 0.92
   2 ?   -1.9   0.9      0.24   6.3e+02     671     741 ..    1648    1711 ..    1633    1743 .. 0.72

  Alignments for each domain:
  == domain 1  score: 596.4 bits;  conditional E-value: 3.7e-182
       Fmp27   1 vlasivllllirlitgisikrigylslrritittkd.vkIeIrslrlrl....fanptwlridnlelldvrvskkkdrekkseeskseeped....... 87 
                 +++s+vl++++r++tgisi+rigy+slrri++++k  vk+eIr l++++    fa+ptwl+i+ ++ l ++v+ k +++ k++++ +  ++        
  KHJ33164.1  17 YISSFVLFATLRILTGISIQRIGYFSLRRISYSPKAgVKVEIRCLGFHIhrptFAQPTWLSIVLTG-LAITVDLKMTEREKNQDKRQRRKHHgyasqlq 114
                 799***************************************************************.*****666666666666666666668999999 PP

       Fmp27  88 .....ksksnsnlkeklsltppkellkrlvrtllriinavdihirntsisdedvhetiigslsltvderkkkvdr............eeekaefeilvr 169
                      k +++ ++k++ +lt  k +lkrl+r++ ++i++vd++++n++is+++v++ +ig +++ vd+r ++               ++++ae+ i+ r
  KHJ33164.1 115 drldeKCSETLRSKTWQQLTVIKDRLKRLHRNI-KWIRMVDLVVTNSTISLTNVGTIQIGNFTMVVDTRARMMGQgrthlppeglekQKQPAEWVITAR 212
                 9*******************************8.************************************999999*********************** PP

       Fmp27 170 nveftvdgkea.eildectlslkgklsidlsggLrdlevslklgrlniplddlenlvkqlkkskeekdeesvkaeerdeksledqseeleepg.skdek 266
                 +++ft +g+ + eild++tl+++g ls +l +gLrd+++slklgr++ip+ddl ++ ++++ + ++ ++++    ++++++ ++  e++++    k+++
  KHJ33164.1 213 SILFTAEGENPvEILDHATLNIQGLLSREL-DGLRDTSISLKLGRVHIPYDDLNKCIDRYQLFYNSLQKNK--LLQTMDVFDDQVLEKIDKNNfRKENM 308
                 ********7778******************.********************************99999996..45557777777777888887444444 PP

       Fmp27 267 kvekvakslelvssllrliseiqikvenlglsdipfsslddlssvsdyvsakevslnlsrldkksPgfkmlfkpddipvqlllaltslkvsldknshke 365
                  ++ + +s el+ss+lr+i+eiq+ ++ +g++++   +     ++++++s+kev+++l rld+ksP+++m+f p+di++q+l+a++s+ +++ ++  k+
  KHJ33164.1 309 GQKHF-ESTELISSVLRGIKEIQFVASYVGFMKRLSLIQSNGLPICLNISMKEVGIDLNRLDQKSPAHRMYFSPKDIAHQALVAALSIAIGI-DGDVKT 405
                 45555.5***********************************************************************************77.999*** PP

       Fmp27 366 deileIPsatltgktnllsktvs.sdtvtakefqnlilelnltlssPtiDldheqlslllsllknikllkkskslkkkkksrrllsllsellpkvnlKf 463
                 +++++IP+at+t++t+ +sk+v+ +  ++a+e++ ++l++n++++sP++Dld++ql l+ls++k  +  +++ +  +k+k      l+s++lpk+n+Kf
  KHJ33164.1 406 ERLAYIPMATTTIRTTFISKIVEsTGRNSADERNANMLFANVVVTSPSVDLDPKQLALVLSISK--IRPRSMDNFIEKRKY----CLISRILPKANVKF 498
                 ***********************************************************99988..899999999999999....************** PP

       Fmp27 464 sieepvlrihlpekgksk....fnllissisvlsfdlesshtdyasesellyklitrlelsssqlyysnnkgvkheilkldslelkvqlnllpnlkvka 558
                 s++epv+ri+lp+ +k+      +l+iss s++s+d+essh   +s + l+y l ++++l+s++lyy++ +g   e+l+++slelk q n+  +l v +
  KHJ33164.1 499 SMHEPVIRITLPSVEKNVqkdgLDLIISSVSSVSLDIESSH---SSLGDLHYGLVSTFRLQSLALYYQTFSGAHYELLDIESLELKTQINAKSELYVVV 594
                 *****************9***********************...******************************************************* PP

       Fmp27 559 sgslntlsldlseleilkgindvvrqlrrqvrnrlnlsveqkyfndeikekredltnseekesenstlkeklfrrlPswlsslkfelsslsldlgcrsv 657
                 +g l t+s+++++ ei++gi++++rq++ +v+  ++  +++ +f                        k ++ r+lPswl ++ +++ ++s+++++   
  KHJ33164.1 595 TGVLKTFSVHMVRPEINDGIHQILRQISFDVESENE-TPKRNAF------------------------KLNFVRALPSWLVNFSLQIDDFSIEIAG--- 665
                 ****************************99944444.4444566........................****************************... PP

       Fmp27 658 lipkiiydstldeevsdfsrgvslklrklsveykklklslgnsvkqireftrsssssesdsd.....dkspresdselsDlssldstasisledevdes 751
                            dee+s+ +rgv+l+l+++ +ey    ++ +++vk  r+ +rs +   sdsd      k ++ ++++ + ++ l+ +++ sle ++ es
  KHJ33164.1 666 ----------IDEEISGQTRGVALQLESWIAEYHVSEIE-NTEVKPRRRLSRSLN---SDSDikckrQKTKSFKSQNSTHGRKLSIQMK-SLEVFIVES 749
                 ..........*****************************.777777777766666...55655577555559999999***********.********* PP

       Fmp27 752 ddklesrpflsLpsfdikvstlsdksgpklrlnleikeidgryslfklfciiyalsllksffpkpiktvkrksskdevqelskpstk............ 838
                  +k+e  p + +p++++++st+sdk gp + + l ik  +++ sl+++++ ++a  +lk++f++  +   ++++k+++ +  ++  +            
  KHJ33164.1 750 LQKWEQDPLIAMPKLEFTFSTTSDKHGPVFDIFLYIKHLLIDCSLYRYYACLVACMVLKRAFMQTNTDL-HEDEKSQSIKNLEI--Ndglspikcqvsn 845
                 ***************************************************************444443.44444444444444..4559********* PP

       Fmp27 839 ...vkkdkkslkellkldvklksiavivrLpndvpllleidn 877
                     ++ +k ++e +++d+ +  +++++++p d+p++l+i+n
  KHJ33164.1 846 tqnSQEFSKFVREQISIDFGAALLQIRAQMPSDPPIMLQIYN 887
                 *88445556789****************************97 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.24
       Fmp27  671 evs.dfsrgvslklrklsveykklklslgnsvkqireftrsssssesdsddkspresdselsDlssldstas 741 
                  +++ d  +g+ +kl+++  +   +k++  ++++   ++t+s +s++ +       + + +l ++   + ta+
  KHJ33164.1 1648 DINaDSVTGLKIKLENFMLDAHQRKEE--LEAYEKGHKTQSKTSGMKMH------QAQLDLISVDIRAITAK 1711
                  3446999********************..88888889999999888777......67777777777777777 PP

>> Fmp27_WPPW  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  503.6  20.0  2.3e-154    6e-151       1     483 []    1656    2175 ..    1656    2175 .. 0.92
   2 ?   -2.1   4.5      0.51   1.3e+03     286     401 ..    2471    2603 ..    2459    2646 .. 0.70
   3 ?   -7.0   2.9         7   1.8e+04      62      78 ..    2785    2802 ..    2768    2818 .. 0.35

  Alignments for each domain:
  == domain 1  score: 503.6 bits;  conditional E-value: 2.3e-154
  Fmp27_WPPW    1 GlKakvdsfklDLHQRreelttvnkklnkqkkvsklkinegeidlksaDiRavsasfketsveeikesslsslsseqssessesdlsrfeipdnDls 97  
                  GlK+k+++f+lD HQR+eel+ ++k+ ++q+k+s++k++++++dl s+DiRa++a++ ets ++   +    + +  ++++++s +s+f+ p nDls
  KHJ33164.1 1656 GLKIKLENFMLDAHQRKEELEAYEKGHKTQSKTSGMKMHQAQLDLISVDIRAITAKIPETSSDKLDLAIC--SAQIFQTDEKNSGQSHFDSPGNDLS 1750
                  9**********************************************************99998877665..4444556788889999********* PP

  Fmp27_WPPW   98 WiDmdDFveldwiepeesnpkikilPLaysPrftYfRqtdegdkiqvdekrispFgnektHdCilgkendpervqkelleeRleeleeqiekleekl 194 
                  WiD dD veldwi p++++ ++kilPL+y+Pr+tYfRqtd++ ++q +  + +pFg e tH+C+++k+++p   q el ++R+++l++q++++  +l
  KHJ33164.1 1751 WIDKDDLVELDWIRPSNKSLETKILPLVYAPRLTYFRQTDQE-NLQENGCNQNPFGSELTHFCTMTKDDNPLWEQYELTKRRKDQLQKQMKSHILSL 1846
                  *****************************************9.5555555677******************************************** PP

  Fmp27_WPPW  195 eelelkseke..deelkeeieelekeikelkeklefletlledlkeseesse..........eeeskskelsaastsesfseldelasseesaseFk 279 
                  +++e + +++  +e++++++e+l+++ + +++k +fle++l+++++    ++          +++  +++l++  ts+s++ ++  +  ++s s+F+
  KHJ33164.1 1847 RNAEIRASQDiqNEKYRADLEQLKRQYQLFRDKNQFLESMLKSFERCVPINDhlnllekdlfSKSYGEQSLENIGTSSSEEFNT--ELLAKSRSDFN 1941
                  ***********9**********************************99888889999998765555445555444444433333..6899******* PP

  Fmp27_WPPW  280 nRFiihniqlkwnnslRnillrylhqvsqrrgfvyymsrkavkfiedlveeqekskkkkskekeesseksssede......esneeleerieelled 370 
                  nRF+ihn+qlkwnn lRni+lry+h  sqr+g+vyy+sr+avkfi+d+v+eq++ k++k+++++++ e +++++       +s ++  + ++e+l++
  KHJ33164.1 1942 NRFVIHNMQLKWNNLLRNIILRYIHHASQRQGIVYYLSRRAVKFILDIVQEQKRPKESKREKEDKKIEPKTNSSTfghgidSSCQNASHYFNEILSE 2038
                  ******************************************************9998887733333333333335778888899************ PP

  Fmp27_WPPW  371 vkk........................aeefeaqnsylvrLIaPQiqlqSeknpksvvlvtakdielkivsiedkervsddvsglverRfgvlldda 443 
                  +kk                        +++f + nsy+++LIaPQiqlqSeknp ++vlvtak++e k+++i+d++rv d++sglv+r+f+v++d++
  KHJ33164.1 2039 AKKfvhtlekdfndsdahneamensdiSKDFLPMNSYHLHLIAPQIQLQSEKNPMAIVLVTAKGMEAKVIEIMDRDRVLDNISGLVQRKFSVEMDSI 2135
                  *99********************************************************************************************** PP

  Fmp27_WPPW  444 qfFvlkkkdfskksesllsgnkyGaekgssWpPWvplEvc 483 
                  qfFv+++k+fs++ +s++sgn+yGa+++s+WpPWvp+Ev+
  KHJ33164.1 2136 QFFVTHQKWFSSQILSMYSGNHYGAPADSAWPPWVPMEVM 2175
                  **************************************98 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.51
  Fmp27_WPPW  286 niqlkwnnslRnillrylhqvsqrrgfvyymsrkavkfiedlveeqekskkkkske.keesseksssedeesneeleerieelledvkk........ 373 
                   ++++++ ++ + l++y+   s+++ ++++m +k +++i+d +ee   + kk+ +  ke+ +e+s+++++ ++e++e r e +l+  +         
  KHJ33164.1 2471 PMKIQLERDIGKKLFDYIFPGSDNKYQSSFMVEK-MELIKDDLEEDGLNLKKSINLpKEQFDEQSNTNSSFQTETVERRPESMLNFEQGqniasskk 2566
                  5777888889999999999999999999999998.56666666666665544333345555555666666666666666666444332223444445 PP

  Fmp27_WPPW  374 ...........aeefeaqnsylvrLIaPQiqlqSeknpk 401 
                              ++f   +s+  ++I+P + + S+k  k
  KHJ33164.1 2567 nsknlgiqsldRQHFRLFQSH--QMITPGLRISSKKSSK 2603
                  566666666655666666665..5677777777776655 PP

  == domain 3  score: -7.0 bits;  conditional E-value: 7
  Fmp27_WPPW   62 veeikesslsslss.eqs 78  
                  ++e  ++s++s ss ++s
  KHJ33164.1 2785 TNERSNNSERSVSSsQNS 2802
                  111111111111111111 PP

>> Fmp27_GFWDK  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0       6.1   1.6e+04      51      74 ..     820     843 ..     811     851 .. 0.77
   2 !  190.7   0.0   6.3e-60   1.6e-56       1     156 []    1250    1410 ..    1250    1410 .. 0.97

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 6.1
  Fmp27_GFWDK  51 eaeeeesfysvtvertltsvKlys 74 
                  e+e+++s+ +++++  l+++K+ +
   KHJ33164.1 820 EDEKSQSIKNLEINDGLSPIKCQV 843
                  4566699999**********9865 PP

  == domain 2  score: 190.7 bits;  conditional E-value: 6.3e-60
  Fmp27_GFWDK    1 DYplplvhvp...seqskslkalklkgdlviaEelveseeslRkievplvpsaeaeee...esfysvtvertltsvKlysdlevdiesseptrltW 90  
                   DYplp++hvp   ++qs+ l+a++lk+++vi+Ee++ + es R++e+++vp   ++++   +  ++++++rt+++vK ysd++vdi++++ptr+tW
   KHJ33164.1 1250 DYPLPFIHVPsvkPNQSSCLPAWSLKANFVIGEEFC-NCESSRNVEIEIVPPRDNNKGtpsQGRFAINISRTISAVKSYSDINVDINTANPTRITW 1344
                   9*********99999********************5.558************999999888899******************************** PP

  Fmp27_GFWDK   91 GksyqpaiqqvmqaldkftkppvDpSpklgfWDKirllfhgkielkvkkdgelelalkgsrdPYki 156 
                   G+s+qpaiq++m+ +++ftkp++DpS+++gfWDKir+ fh++++l++k+dg+++l lkgsr+PY+i
   KHJ33164.1 1345 GSSFQPAIQDMMMTIENFTKPQIDPSDRIGFWDKIRYSFHSRVNLAWKNDGDVHLLLKGSRNPYEI 1410
                   ****************************************************************97 PP

>> DUF2405  Domain of unknown function (DUF2405)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.0   0.4   2.7e-49     7e-46       2     152 ..     903    1060 ..     902    1061 .. 0.98
   2 ?   -3.8   0.0       4.2   1.1e+04      19      55 ..    2106    2142 ..    2096    2147 .. 0.70

  Alignments for each domain:
  == domain 1  score: 156.0 bits;  conditional E-value: 2.7e-49
     DUF2405    2 klirlyvesptvkkvwarllsikdlrvdlre.......kkseeeksidveteairlriPhkfvvykiidniittvKaikqlkhrfktskneevlepk 91  
                  k++rl   +p++++vwa+++sik++rvd+re          + ek id+++ea r++iPh++vv++++dn+++t+K+++ql+hr+ +s+++   ++ 
  KHJ33164.1  903 KFLRLGSGAPRIRQVWAKIISIKNFRVDYREsqftgedGVIKAEKYIDINAEATRIAIPHQLVVHQVVDNLVNTLKSVEQLHHRLLHSEKSVTENKC 999 
                  78999999****************************99999******************************************************** PP

     DUF2405   92 eekpkklPkiklkskrllfeleDDpFEaeLglIyriGlvEqkeRlakeeaFeekvkkiree 152 
                   ++pk++Pk+ +++k+llfeleD+ FE++Lg+Iyr+G++Eq +Rla+++ F+ k++k++ee
  KHJ33164.1 1000 SVEPKQFPKVLIRVKALLFELEDGLFEWKLGVIYRTGILEQAQRLARKAVFNVKARKVKEE 1060
                  *********************************************************9986 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 4.2
     DUF2405   19 rllsikdlrvdlrekkseeeksidveteairlriPhk 55  
                  ++++i d    l++ +   +++++ve+++i++ + h+
  KHJ33164.1 2106 KVIEIMDRDRVLDNISGLVQRKFSVEMDSIQFFVTHQ 2142
                  5555555555555556677899999999999999887 PP

>> Fmp27_SW  RNA pol II promoter Fmp27 protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.0   0.1     1e-32   2.6e-29       1     103 []    1131    1232 ..    1131    1232 .. 0.96
   2 ?   -3.2   0.1       5.5   1.4e+04      14      51 ..    2612    2649 ..    2609    2677 .. 0.61

  Alignments for each domain:
  == domain 1  score: 102.0 bits;  conditional E-value: 1e-32
    Fmp27_SW    1 arerLqehnsksWirrikaakekqkeeikeirerlygkeelskedkdknekilplpkrppLlrltiedldleldkpsfpledlpdFlhdvGkGvPkd 97  
                  a+e+L e+ s+sW+rri++a  + k +++e+re+++g++e  +ed +++e+ l++p+rp+L++++i++l ++++kp+fpl +lp+F+++vGkG+P+d
  KHJ33164.1 1131 AYEKLLEFDSQSWKRRIDQAFFRTKAKMRELREAFWGADE-LPEDVKSDEETLQVPQRPALMEVYISNLYIKIEKPTFPLAELPNFINRVGKGMPHD 1226
                  789*************************************.5777777778********************************************** PP

    Fmp27_SW   98 teYslL 103 
                  ++Y+lL
  KHJ33164.1 1227 MKYALL 1232
                  ****98 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 5.5
    Fmp27_SW   14 irrikaakekqkeeikeirerlygkeelskedkdknek 51  
                  irr +++++++ + + ++++r+  + ++sk + +++++
  KHJ33164.1 2612 IRRTESFQTQHASIYDSKSKRFALSRHNSKLKIEQSSD 2649
                  67788888888888888877777776666666665554 PP

>> CheZ  Chemotaxis phosphatase, CheZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       3.5   9.1e+03     134     159 ..     968     993 ..     941    1017 .. 0.64
   2 ?    1.0   0.1      0.13   3.3e+02      28     112 ..    1958    2050 ..    1946    2064 .. 0.71
   3 ?    8.6   0.1   0.00061       1.6      74     147 ..    2227    2304 ..    2210    2332 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 3.5
                 XXXXXXXXXXXXXXXXXXXXXXXXXX CS
        CheZ 134 QvikkvielvkeveskLvqlllease 159
                 Qv+ ++++ +k+ve+   +ll + ++
  KHJ33164.1 968 QVVDNLVNTLKSVEQLHHRLLHSEKS 993
                 55555555555555444444443333 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.13
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXX CS
        CheZ   28 lekaaeeipdardrLeyvielTeqAAertldav.ekalpladklkeeakeleeewerllerelekee.......frelvkeveaflkeveekt 112 
                   +   + i+ a++r   v  l  +A +  ld+v e+  p  +k ++e k++e++ ++ +  +   ++       f+e+++e ++f++++e++ 
  KHJ33164.1 1958 RNIILRYIHHASQRQGIVYYLSRRAVKFILDIVqEQKRPKESKREKEDKKIEPKTNSSTFGHGIDSScqnashyFNEILSEAKKFVHTLEKDF 2050
                  555667899999**99****************977888999999********99887665554433412233335666666666666555544 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.00061
                  XXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXX CS
        CheZ   74 akeleeewerllere..lekeefrelvkeveaflkeveektealkkqLleilmaQdfqDLtG..Qvikkvielvkeve 147 
                  ++++++ w ++ + +  +++ ++ +++  v+++l  +e + ++ ++ L  i++a df DL G   +i  + e ++++e
  KHJ33164.1 2227 INRMDRVWVEFPKVHaiCNSAQYYAMYIIVMDLLMYSEPQEKTRNELLEKIILASDFSDLRGvpEMIMTLQERIRQLE 2304
                  5666777777776663345777888888999999999999999999***************93335555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2893 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1104  (0.0615762); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.34u 0.36s 00:00:01.70 Elapsed: 00:00:00.53
# Mc/sec: 16541.33
//
Query:       KHJ33165.1  [L=232]
Description: putative mrna turnover protein 4 -like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.3e-26   90.7   0.0    1.5e-25   89.0   0.0    1.9  2  RL10P_insert   Insertion domain in 60S ribosomal protein L10P
    1.1e-17   64.0   0.0    1.7e-17   63.4   0.0    1.3  1  Ribosomal_L10  Ribosomal protein L10


Domain annotation for each model (and alignments):
>> RL10P_insert  Insertion domain in 60S ribosomal protein L10P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.52   4.7e+03      18      32 ..     105     119 ..      97     120 .. 0.80
   2 !   89.0   0.0   1.6e-29   1.5e-25       1      71 []     125     207 ..     125     207 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.52
  RL10P_insert  18 lelaPgsiepeLrkl 32 
                   ++  P+ i+  ++kl
    KHJ33165.1 105 TNRDPDAIIAYFQKL 119
                   556799999999998 PP

  == domain 2  score: 89.0 bits;  conditional E-value: 1.6e-29
  RL10P_insert   1 AraGtiAtedviipagplela............PgsiepeLrklglptklkkGkivleedylvckkGetltseqaqlLklLgi 71 
                   AraGt+At++++ipag + ++            ++siepeLrklg+pt+l+kGki+l++dy+vck+G  l+s+q+++Lkl+g+
    KHJ33165.1 125 ARAGTVATRQFTIPAGVVMSRggeiadedditmAHSIEPELRKLGVPTSLVKGKIILQNDYTVCKAGALLDSRQTRILKLFGV 207
                   9***************999999***********************************************************98 PP

>> Ribosomal_L10  Ribosomal protein L10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.4   0.0   1.9e-21   1.7e-17       8      99 ..      25     120 ..      18     121 .. 0.92

  Alignments for each domain:
  == domain 1  score: 63.4 bits;  conditional E-value: 1.9e-21
                    CCCCCCCCCCTTSSEEEEEE-TTS-HHHHHHCCCHHHHHGCEEEEESCCCCCCCCHCCTSS..S.....SCGCCSSSEEEEEESS-TCHHHHCCCC CS
  Ribosomal_L10   8 elvkelkellkkyksvvvvdyegltvaqlqelRkklrengaelkvvKntlmrrAleetgeee.k.....lkellkgpvalvftnedpvalakvlee 97 
                    +++++++++l++y +++v +++ ++++ l+++R++l++  ++l+++K ++m +Al+ t+ee+ +     l+++l+g+v+l+ftn dp a++ ++++
     KHJ33165.1  25 KVFANVRNSLDSYLYCWVYSVDSMRNTYLKDVRNELSD--CRLFFGKTKVMAKALGLTPEEAyQtntdqLAKYLNGNVGLLFTNRDPDAIIAYFQK 118
                    7899*********************************5..6*******************964488889************************998 PP

                    CH CS
  Ribosomal_L10  98 fa 99 
                     +
     KHJ33165.1 119 LS 120
                    75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 1619.05
//
Query:       KHJ33166.1  [L=402]
Description: putative u1 small nuclear ribonucleoprotein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.2e-25   89.1   4.2    2.2e-25   89.1   4.2    1.8  2  U1snRNP70_N  U1 small nuclear ribonucleoprotein of 70kDa MW N
    9.3e-17   60.6   0.2    4.2e-16   58.5   0.2    2.0  1  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
    1.4e-05   25.1   0.0    2.4e-05   24.4   0.0    1.3  1  RRM_7        RNA recognition motif


Domain annotation for each model (and alignments):
>> U1snRNP70_N  U1 small nuclear ribonucleoprotein of 70kDa MW N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.1   4.2   3.7e-29   2.2e-25       2      93 .]       4      93 ..       3      93 .. 0.95
   2 ?   -2.8   0.1       1.8   1.1e+04      26      75 ..     142     148 ..     133     154 .. 0.43

  Alignments for each domain:
  == domain 1  score: 89.1 bits;  conditional E-value: 3.7e-29
  U1snRNP70_N  2 kLPpnLlkLFaprpplpylppldydpekrktkkkitGvaaflselkedeeeqeppektetkeekkererkekkekkeekleealeeydPkeD 93
                 +LPpnLl+LF+prpp++y+pp+d++ e+r+t ++itGvaafl+ l+e+ +++++ ++te++ ++++r + ek+e++++ l+e  + y+P+eD
   KHJ33166.1  4 QLPPNLLALFTPRPPVRYIPPSDHPSEDRRT-ASITGVAAFLPYLQEY-KDKDNYQPTESWLQRHDRLKLEKRERQNQLLTEVSKLYKPQED 93
                 79*****************************.99***********876.66666777**********************************9 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.8
  U1snRNP70_N  26 dpekrktkkkitGvaaflselkedeeeqeppektetkeekkererkekke 75 
                  +p+k+                                           k+
   KHJ33166.1 142 KPNKK-------------------------------------------KK 148
                  11111...........................................11 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   0.2     7e-20   4.2e-16       1      70 []     104     182 ..     104     182 .. 0.95

  Alignments for each domain:
  == domain 1  score: 58.5 bits;  conditional E-value: 7e-20
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.........TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.........etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 l+V  L++d+te++L+  F+ fGpi++i++v d         +++k++g+afV +e + d+++Al+ ++g  ++gr++k
  KHJ33166.1 104 LIVARLSYDATEKDLESEFGRFGPIERIRIVVDthqdekpnkKKKKHRGYAFVVYEREKDMRAALDGCDGVSIKGRRIK 182
                 67999***************************99998888778899******************************996 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0     4e-09   2.4e-05       7      71 ..     107     172 ..     101     190 .. 0.82

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 4e-09
       RRM_7   7 GGlPiDiteeelkatfkefgkv.lvdwPkkaeskkkaaenskaakgyvflvfedeksvkaLleact 71 
                   l  D te++l++ f++fg++ ++     +++++k ++++k ++gy+f+v+e+ek ++a l+ c 
  KHJ33166.1 107 ARLSYDATEKDLESEFGRFGPIeRIRIVVDTHQDEKPNKKKKKHRGYAFVVYEREKDMRAALDGCD 172
                 56789***************9844666666666666666778899*****************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3031.85
//
Query:       KHJ33167.1  [L=553]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (553 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       349  (0.0194657); expected 358.6 (0.02)
Passed bias filter:                      242  (0.0134977); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 4352.65
//
Query:       KHJ33168.1  [L=187]
Description: putative transferase hexapeptide domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.7e-10   38.8  16.8    1.1e-05   24.9   1.1    3.6  3  Hexapep    Bacterial transferase hexapeptide (six repeats)
    3.9e-05   23.3  13.6       0.83    9.5   5.2    3.7  4  Hexapep_2  Hexapeptide repeat of succinyl-transferase


Domain annotation for each model (and alignments):
>> Hexapep  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   3.1   6.5e-06     0.058       4      35 ..      39      73 ..      37      74 .. 0.92
   2 !    8.8   0.2   0.00015       1.3      13      29 ..      85     101 ..      82     103 .. 0.50
   3 !   24.9   1.1   1.2e-09   1.1e-05       4      35 ..     105     136 ..     104     137 .. 0.95

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 6.5e-06
                EETTEEE-T...TEEEETTEEE-TTEEEETTEEEE CS
     Hexapep  4 IGsnvlIgp...faviggnVkIGdnvkIgagvvig 35
                +Gsn++I+p      + g ++IG+ ++I + ++ig
  KHJ33168.1 39 LGSNTVIHPrckLNSLNGSIIIGNCCIISERCRIG 73
                79*******9999999*************999997 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00015
                 TEEEETTEEE-TTEEEE CS
     Hexapep  13 faviggnVkIGdnvkIg 29 
                 ++vi + V++ ++++++
  KHJ33168.1  85 GVVIENSVVVEPGAIVE 101
                 34444444444444444 PP

  == domain 3  score: 24.9 bits;  conditional E-value: 1.2e-09
                 EETTEEE-TTEEEETTEEE-TTEEEETTEEEE CS
     Hexapep   4 IGsnvlIgpfaviggnVkIGdnvkIgagvvig 35 
                 IG++++I  +++ig ++++G+++k+g+ + ++
  KHJ33168.1 105 IGEGSVIEVNSKIGKGAILGKHCKVGPSCEVA 136
                 9**************************99885 PP

>> Hexapep_2  Hexapeptide repeat of succinyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   2.8   0.00053       4.7       3      26 ..      38      66 ..      37      68 .. 0.86
   2 !    9.5   5.2   9.2e-05      0.83       3      34 .]      65     102 ..      58     102 .. 0.89
   3 !    8.0   1.5   0.00027       2.4       3      28 ..     104     131 ..     104     133 .. 0.91
   4 !    5.6   0.1    0.0015        13       3      15 ..     122     134 ..     114     140 .. 0.65

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00053
                EE-TT-EE-TT-EE....S.EEE-TT-EE CS
   Hexapep_2  3 iIGdnCliGanagi....G.vslGdncvv 26
                + G n++i++++      G +++G+ c++
  KHJ33168.1 38 SLGSNTVIHPRCKLnslnGsIIIGNCCII 66
                789**********7677955*******98 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 9.2e-05
                 EE-TT-EE-TT-E.E.....SEEE-TT-EE-TT-EE-S CS
   Hexapep_2   3 iIGdnCliGanag.i.....GvslGdncvvgaGvvita 34 
                 iI ++C iG  ++ +     Gv +++ +vv++G ++ a
  KHJ33168.1  65 IISERCRIGLQSEpTqadaeGVVIENSVVVEPGAIVEA 102
                 56689********9566778*************99875 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.00027
                 EE-TT-EE-TT-EE..SEEE-TT-EE-T CS
   Hexapep_2   3 iIGdnCliGanagi..GvslGdncvvga 28 
                 +IG+ ++i +n+ i  G +lG+ c+vg+
  KHJ33168.1 104 RIGEGSVIEVNSKIgkGAILGKHCKVGP 131
                 6999*********9888********985 PP

  == domain 4  score: 5.6 bits;  conditional E-value: 0.0015
                 EE-TT-EE-TT-E CS
   Hexapep_2   3 iIGdnCliGanag 15 
                 i G+ C +G++++
  KHJ33168.1 122 ILGKHCKVGPSCE 134
                 4566666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       283  (0.0157845); expected 358.6 (0.02)
Passed bias filter:                      234  (0.0130515); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1411.27
//
Query:       KHJ33169.1  [L=356]
Description: putative air1 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       575  (0.0320709); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2796.02
//
Query:       KHJ33170.1  [L=215]
Description: hypothetical protein EV44_g1312 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0017   18.2   0.6     0.0036   17.2   0.6    1.6  1  Chromo    Chromo (CHRromatin Organisation MOdifier) domain


Domain annotation for each model (and alignments):
>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.6     2e-07    0.0036       3      48 ..     136     179 ..     134     184 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2e-07
                 EEEEEEEEEETTEEC..EEEEEEETTSTGGGTEEEEGGGCSSHSHHHH CS
      Chromo   3 VerIidhrtdkdgle..leYlVKWkglpysentWEpeenlekcfqeli 48 
                 V+rI+  + ++ g++     lVKWkg+   e tWE++ nle    +++
  KHJ33170.1 136 VDRILRAERVRRGRKwvRRVLVKWKGFV--EPTWEDRVNLEAN--KAL 179
                 9****555555555559**********6..67********955..545 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       594  (0.0331307); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1531.69
//
Query:       KHJ33171.1  [L=139]
Description: hypothetical protein EV44_g4052 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00028   20.7   0.5     0.0027   17.5   0.2    2.0  2  Exo_endo_phos_2  Endonuclease-reverse transcriptase
  ------ inclusion threshold ------
       0.16   11.7   0.0       0.21   11.2   0.0    1.2  1  Imm64            Immunity protein 64


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.2   3.1e-07    0.0027      62     118 ..       2      57 ..       1      58 [. 0.84
   2 ?    1.7   0.0     0.024   2.2e+02      47      66 ..     100     119 ..      66     129 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 3.1e-07
  Exo_endo_phos_2  62 efleehslsllnllksgptfkssngsstiDltltsdnlals...kleleeedlgSDHrpi 118
                      ++l+++  sl+++++ +pt+++    +++Dl++++++l+ +   +  +++ d++SDH p 
       KHJ33171.1   2 KWLDAKYFSLISEVD-VPTHNR---GNVLDLCFATHSLLAKgvsSYVQHDLDTTSDHIPL 57 
                      688888888888877.788844...689**************9988888899*****985 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.024
  Exo_endo_phos_2  47 gsedtdssargeeLieflee 66 
                      +++ ++ ++r+eeL+++l++
       KHJ33171.1 100 NKSPSNIDKRAEELVNILQS 119
                      44333348999999999986 PP

>> Imm64  Immunity protein 64
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   2.4e-05      0.21      94     134 ..      79     119 ..      61     126 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.4e-05
       Imm64  94 iekekeflgllldikeeeLleekskeeiesiteelievfee 134
                 i+++k  + lll+i+  e l++ks  +i++ +eel++++++
  KHJ33171.1  79 INEKKFQFLLLLNISRMEPLQNKSPSNIDKRAEELVNILQS 119
                 44444458999**************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       365  (0.0203581); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 995.55
//
Query:       KHJ33172.1  [L=334]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
        1.3    9.5   6.0        5.2    7.5   0.0    2.8  2  eIF3g           Eukaryotic translation initiation factor 3 su


Domain annotation for each model (and alignments):
>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0   0.00029       5.2      97     119 ..     195     216 ..     141     220 .. 0.87
   2 ?    1.9   3.3     0.015   2.7e+02     103     115 ..     237     249 ..     225     260 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00029
       eIF3g  97 lkkkekklvkCriCkgdHfTskC 119
                  k k++ l  C+ C+g+H T +C
  KHJ33172.1 195 FK-KQQPLEFCKRCNGHHPTKNC 216
                 45.4566789************* PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.015
       eIF3g 103 klvkCriCkgdHf 115
                  + kCr+C+g H 
  KHJ33172.1 237 AVTKCRNCGGPHR 249
                 4589********5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       889  (0.0495845); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2428.39
//
Query:       KHJ33173.1  [L=360]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2568.04
//
Query:       KHJ33174.1  [L=163]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       985  (0.0549389); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1196.75
//
Query:       KHJ33175.1  [L=318]
Description: putative transcription initiation factor tfiid subunit 11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-31  107.7   0.1    5.1e-31  106.6   0.1    1.6  1  TAFII28   hTAFII28-like protein conserved region
  ------ inclusion threshold ------
       0.14   12.2   1.5       0.18   11.8   0.0    1.9  3  UL17      Uncharacterized UL17


Domain annotation for each model (and alignments):
>> TAFII28  hTAFII28-like protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.6   0.1   5.7e-35   5.1e-31       2      86 .]     172     281 ..     171     281 .. 0.93

  Alignments for each domain:
  == domain 1  score: 106.6 bits;  conditional E-value: 5.7e-35
     TAFII28   2 LlenfdeeqlnRYevfrrsklnkaavkklvnsvlsqsvsqnvaivvaglaKvFvgeiveeArevqeew....ees.....................gpl 75 
                 L+++f++eq++RYe++r+skl++++v+++vn++lsqs +q+v+++v+++aKvF+g+++e+Ar+vq+ew    +e+                     gpl
  KHJ33175.1 172 LTRAFNKEQWQRYEAWRSSKLSDSVVRRIVNQTLSQSAPQQVILAVRSVAKVFAGDMIERARKVQTEWleisGENpglpflkvedssipkqkekrrGPL 270
                 8899****************************************************************65553338999999999999999999967** PP

     TAFII28  76 qpehlreayrr 86 
                 +p+hlrea+rr
  KHJ33175.1 271 MPDHLREAFRR 281
                 *********97 PP

>> UL17  Uncharacterized UL17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0     2e-05      0.18      27      92 ..      10      74 ..       6      84 .. 0.77
   2 ?   -4.0   0.1       1.7   1.6e+04      38      47 ..     165     174 ..     156     180 .. 0.66
   3 ?   -2.8   0.0      0.74   6.7e+03      59      81 ..     259     281 ..     255     286 .. 0.55

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2e-05
        UL17 27 vskrswdttvyhrrrkhlprrrapcgp.qrpaeipkrrkkaavllfwhdlcwlfrrlffpredsepl 92
                 s  s   t++h+   h+ +rr    p   pa   krrk +   l +  ++  +r+  fp e +   
  KHJ33175.1 10 FSTASSSNTIFHQSIPHMSKRRQLENPpSAPA--NKRRKASMAPLNFSSIAHPLRQTSFPSERTSQS 74
                57778899**********99998665515555..6999999999999*************9876544 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 1.7
        UL17  38 hrrrkhlprr 47 
                   rr+hl  r
  KHJ33175.1 165 EERRRHLLTR 174
                 5566776554 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 0.74
        UL17  59 ipkrrkkaavllfwhdlcwlfrr 81 
                 ipk+++k    l+   l   frr
  KHJ33175.1 259 IPKQKEKRRGPLMPDHLREAFRR 281
                 55555555554554445555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1079  (0.0601818); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2295.19
//
Query:       KHJ33176.1  [L=254]
Description: hypothetical protein EV44_g1310 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       517  (0.028836); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.20s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 2026.94
//
Query:       KHJ33177.1  [L=427]
Description: putative trna-guanine transglycosylase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-63  214.0   0.0    3.9e-63  213.7   0.0    1.0  1  TGT       Queuine tRNA-ribosyltransferase


Domain annotation for each model (and alignments):
>> TGT  Queuine tRNA-ribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.7   0.0   2.2e-67   3.9e-63       3     349 ..      21     391 ..      18     392 .. 0.86

  Alignments for each domain:
  == domain 1  score: 213.7 bits;  conditional E-value: 2.2e-67
                 EEEEEEEETT.EEEEESEEEEBETTSSBTTB-HHHHH.H...T.TES-EEEEHHHHHHTTTHHHHHHTTHHHHHHT--S-EEEE-SHHHHHHH...EEE CS
         TGT   3 aRlGklelph.gtietPafmpvgtqgtvkgltpdelkee...l.gaqiilsntyhlelrpgeelvakagglhkflgwdkpiltdsggfqvfsl...kki 93 
                  RlG+l  ++ +++ tP+f+ ++++g +++++pd++ ++   l g+++ l++ ++ ++  ++ +     +lhkf++++++++t     + + +   +  
  KHJ33177.1  21 PRLGQLFCKGrKPVPTPNFFHIASRGVIPHIAPDVVLSSdiqLeGVHMALEDFVQNKVCTSDMIPYPNLSLHKFTAMSDNVITLLAPRRTPAVsavHGN 119
                 69******99899*********************994333333358888888776665555555555559**********9999888887766534466 PP

                 ESSEEEEE-TTTS-EEEE-HHHHHHHHHHHT-SEEE-------S..S--HHHHHHHHHHHHHHHHHHHHHH..SE.EEEEE--TT-HHHHHHHHHHHHH CS
         TGT  94 teegvsfqsridGskvlltpeesieiqeklgsDiimalddvvps..paskkrveksverTlrwldrcleah..qa.lfgivqGglyedlreesaeelak 187
                 ++ g+++ +   G  ++++++++i++ ++l++Dii++++d v++  +  kkr+ k+v rT +wl ++l +   +  +f+++ + ++ + ++ +++ +++
  KHJ33177.1 120 SDSGIPIYTCR-GF-QTVSNKDYISCSRALSPDIIISMAD-VSYglKPGKKRLAKMVSRTQNWLSEILLENreNLaIFAPILP-IDSQDQNGYLNFISD 214
                 9*********6.**.**********************999.555457789*****************955557777*******.88889********98 PP

                 H--SEEEE-SSSSSSHHHHHHHHHHHHGGGS-TTS-EE.ETTB-SHHHHHHHHHTT--EEEESHHHHHHHTTEEEE.....................TT CS
         TGT 188 rdfdgyaigGlsvgeekeellevveavtellpedkpry.lmGvgtPedlleavalGvDmfdcvyptrtarngralt.....................se 264
                   ++   i+Gl++++  ++ll  +  +t++   +  r+ l  + +P d+l+ ++lG+D+f+++++   +++g alt                     + 
  KHJ33177.1 215 EVAE--KISGLAFYD--SNLLLDLPITTNNT--KILRLtLDEPSSPIDILKRISLGIDIFTVPFISFSTDAGIALTfrfprplpvdenihseklqaiPL 307
                 7444..6********..77777778888888..67788799999********************************88877777766665544444444 PP

                 EEEETTSGGGTT--SBSSSS--SHHHHH-BHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHT CS
         TGT 265 gelnlknakyaedfspldegCsCytCknytraylhhllktkemlgaiLltiHNlhyylelfkriReaIkegtfeefveefarkye 349
                 g ++++ +++a++++pl ++C+Cy Ck ++ray++hll +kemlg++Ll+iHN+h++ ++f +iRe+I++g+f+   + fa++y+
  KHJ33177.1 308 G-VDMWLSCHATSLTPLAPECHCYSCKYHHRAYIQHLLSAKEMLGWVLLQIHNHHILTTFFTSIRESISQGHFDTDYQIFANTYS 391
                 5.**************************************************************************999998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 3231.53
//
Query:       KHJ33178.1  [L=375]
Description: putative origin recognition complex subunit 6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-29  103.1   1.9    1.8e-29  103.1   1.9    2.0  2  ORC6      Origin recognition complex subunit 6 (ORC6)


Domain annotation for each model (and alignments):
>> ORC6  Origin recognition complex subunit 6 (ORC6)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.1   1.9     1e-33   1.8e-29       2     191 ..      10     196 ..       9     247 .. 0.76
   2 ?   -0.8   2.4     0.041   7.3e+02     294     329 ..     275     350 ..     270     373 .. 0.67

  Alignments for each domain:
  == domain 1  score: 103.1 bits;  conditional E-value: 1e-33
        ORC6   2 sdllpthsgglpkkllslassLynlSlskkvvlkneeEiARchiCaelAaekLkekldlpysvkkiPlppkaykklldlfrqsLsnsssatstPsksps 100
                 ++l+p+hs++ p+ l++la+sL  +S+ +k +l++eeE+AR+++Ca lA+e+Lk kldlp    ++P+pp+ay+kl+++    L +++     Ps++++
  KHJ33178.1  10 ENLIPRHSNSIPSILIDLANSLFVQSR-SKCILRAEEEVARAYACANLACERLKGKLDLPLIEPRPPIPPRAYEKLYAYISGKLDPKT-----PSRKRK 102
                 689************************.*********************************99*******************999999.....877777 PP

        ORC6 101 spstdpkslrkqlfsTPtKsktlktalsa.......sksssplkrrrklaneedgeeeeed..apswvstsir..dsrpeisrtlspskslgdesilfn 188
                 +p       +++ +sT+ +++++k+ ++         ++  pl + +   + + ++e +++   p wv ++ir  ++  ++ +   p++ +g+esil  
  KHJ33178.1 103 QP-------TSSKTSTAISVTPSKSIQPWsmlrekpKTKAEPLNKSTVEKDCDISNEAKMEflIPLWVLPTIRllCKHMQTPKV-APHVLAGVESILCL 193
                 77.......555556666666666665554455365556666665555555555666666667899999999999555544444.6**********976 PP

        ORC6 189 dss 191
                 +  
  KHJ33178.1 194 PIP 196
                 533 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.041
        ORC6 294 redvdewiklv.eewikgeeWfrei.......................................ekkydyfdgaee 329
                 ++dv+ wik + ++  k  +W r+i                                        ++ydy  ++++
  KHJ33178.1 275 ESDVNAWIKEIeDGGWKELDWWRNIfeiaghqsyeysedelghdipvedkicsdgesdfkknevNNRYDYLSEDRK 350
                 589999**99986677779999999999998888777777777777666666666666555555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       618  (0.0344693); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2705.40
//
Query:       KHJ33179.1  [L=439]
Description: putative u3 small nucleolar rna associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.2e-30  103.9  18.9    9.2e-30  102.8  18.9    1.6  1  Sof1         Sof1-like domain
    1.1e-27   95.7   6.5    7.9e-06   26.5   0.1    6.6  7  WD40         WD domain, G-beta repeat
    2.5e-10   40.5   0.1      0.073   13.4   0.0    4.4  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
      0.019   14.0   0.0       0.25   10.2   0.0    2.7  4  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p


Domain annotation for each model (and alignments):
>> Sof1  Sof1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.8  18.9     2e-33   9.2e-30       1      86 [.     352     437 ..     352     438 .. 0.99

  Alignments for each domain:
  == domain 1  score: 102.8 bits;  conditional E-value: 2e-33
        Sof1   1 AkAseklgvlsaReraaleyreaLkekykhmpeikrIarhRhvPkaikkakkekremkeaekrKeenrrkhskkgsvprkserkkk 86 
                 A+As++ g++sa++r+aley+eaL e+y+hmpei+rI+rhRh+Pk++kka+++k+e+++a+kr++en+r+h+kk+ ++rk er+k+
  KHJ33179.1 352 ANASKREGIKSAKQRQALEYNEALCERYAHMPEIRRIKRHRHIPKVVKKAREIKTEELKAIKRRQENERRHTKKQFEKRKDERTKM 437
                 8***********************************************************************************97 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   4.1e-06     0.018       8      38 .]      61      93 ..      55      93 .. 0.79
   2 !   18.9   0.0   4.7e-07    0.0021       6      38 .]     102     134 ..      97     134 .. 0.88
   3 ?   -2.7   0.1       3.1   1.4e+04      14      29 ..     155     170 ..     151     172 .. 0.51
   4 ?    4.2   0.0      0.02        89      13      38 .]     197     223 ..     188     223 .. 0.67
   5 ?    1.4   0.0      0.15   6.8e+02      15      38 .]     241     265 ..     236     265 .. 0.85
   6 !   25.8   0.0   2.9e-09   1.3e-05       4      38 .]     273     308 ..     271     308 .. 0.92
   7 !   26.5   0.1   1.8e-09   7.9e-06       9      37 ..     312     350 ..     309     351 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.1e-06
                ESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40  8 tGH.ssvtslafspdgaw.lasGsdDgtvriWd 38
                +GH ++v+ +a +p +   +asGs Dg v++Wd
  KHJ33179.1 61 KGHvDGVYTMAKDPQSLQrFASGSGDGVVKVWD 93
                699888998875555555589**88*******9 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 4.7e-07
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                   t+H + v +l++  d+++l+++s D+ ++++d
  KHJ33179.1 102 NTTAHeNIVKGLCWTNDKKLLTCAS-DRYIKLYD 134
                 5689*7779************9889.******98 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 3.1
                 EEEEEETTSSEEEEEE CS
        WD40  14 tslafspdgawlasGs 29 
                 tsl+ +++ + +a++s
  KHJ33179.1 155 TSLSHHRSLNSFAAAS 170
                 4444444445555555 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.02
                 EEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40  13 vtslafspdgaw.lasGsdDgtvriWd 38 
                 +t+++f++  +  las   D+++ ++d
  KHJ33179.1 197 ITAVSFNQIETSiLASTATDRSIILYD 223
                 6666555555551554455****9998 PP

  == domain 5  score: 1.4 bits;  conditional E-value: 0.15
                 EEEEETTSSE.EEEEETTSEEEEEE CS
        WD40  15 slafspdgaw.lasGsdDgtvriWd 38 
                 +++++p  a+ +a + +D++++i+d
  KHJ33179.1 241 AISWNPMEAFnFAVANEDHNIYIFD 265
                 67888888888888999******98 PP

  == domain 6  score: 25.8 bits;  conditional E-value: 2.9e-09
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 l +l+ H   v ++ fsp g  l+sGs+D+tvr+W+
  KHJ33179.1 273 LNVLKDHvAAVMDIEFSPTGEELVSGSYDRTVRLWS 308
                 567899*888*************************5 PP

  == domain 7  score: 26.5 bits;  conditional E-value: 1.8e-09
                 SSSS..........EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   9 GHss..........vtslafspdgawlasGsdDgtvriW 37 
                 GHs           v s+++ pd ++++sGsdDg++r+W
  KHJ33179.1 312 GHSRdiyhtkrmqrVFSCRWTPDAKFILSGSDDGNIRLW 350
                 6622445555577788999******************** PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   4.8e-05      0.22      29      68 ..      91     136 ..      77     140 .. 0.78
   2 ?    1.2   0.0       0.1   4.7e+02      35      75 ..     191     232 ..     175     247 .. 0.74
   3 !   13.4   0.0   1.6e-05     0.073      10      89 ..     252     331 ..     242     331 .. 0.85
   4 !   11.8   0.0   5.2e-05      0.23      36      71 ..     321     356 ..     314     374 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.8e-05
  ANAPC4_WD40  29 vwtl.......eedkedsevrsLaWkpdgklLavaysdgevrlldae 68 
                  vw+l       +++++++ v++L+W +d klL  a sd  ++l+d +
   KHJ33179.1  91 VWDLisreetwNTTAHENIVKGLCWTNDKKLLTCA-SDRYIKLYDPY 136
                  555555555555589999**********9999876.78899999866 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.1
  ANAPC4_WD40  35 dkedsevrsLaWkp.dgklLavaysdgevrlldaesgkvvhs 75 
                  ++   +++++++++ + ++La    d ++ l+d  +   + +
   KHJ33179.1 191 PNATDTITAVSFNQiETSILASTATDRSIILYDLRTSMPLAK 232
                  567778999999872457899999999999999988766655 PP

  == domain 3  score: 13.4 bits;  conditional E-value: 1.6e-05
  ANAPC4_WD40  10 iAlatedgellvfRl.ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  +A+a+ed ++++f + ++ r  ++  +++   v +++++p g+ L+ +  d +vrl +  +g+    +++k+ ++v +  W
   KHJ33179.1 252 FAVANEDHNIYIFDMrKMTRALNV-LKDHVAAVMDIEFSPTGEELVSGSYDRTVRLWSRMKGHSRDIYHTKRMQRVFSCRW 331
                  699999999999987567888888.6788999*******************************999999999998888777 PP

  == domain 4  score: 11.8 bits;  conditional E-value: 5.2e-05
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgk 71 
                  k+ ++v s +W pd k++  + +dg++rl  a+  k
   KHJ33179.1 321 KRMQRVFSCRWTPDAKFILSGSDDGNIRLWRANASK 356
                  67789999*********************9887654 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.45     2e+03     203     224 ..      81     102 ..      78     108 .. 0.75
   2 ?   -2.2   0.0      0.34   1.5e+03      65      97 ..     194     226 ..     176     235 .. 0.85
   3 ?   10.2   0.0   5.6e-05      0.25     152     215 ..     244     308 ..     238     340 .. 0.90
   4 ?   -0.2   0.0     0.086   3.9e+02     188     220 ..     324     356 ..     308     365 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.45
    Ge1_WD40 203 atasedGevkffqvyledeeep 224
                 a  s dG+vk + +   +e+ +
  KHJ33179.1  81 ASGSGDGVVKVWDLISREETWN 102
                 778999****999887776655 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.34
    Ge1_WD40  65 kgevldlafahvsskillavdekgslfvykvee 97 
                 +++++ ++f  ++++il++     s+++y++++
  KHJ33179.1 194 TDTITAVSFNQIETSILASTATDRSIILYDLRT 226
                 667888999999999999999999999998875 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 5.6e-05
    Ge1_WD40 152 gdkaeiwsvdmiaskygsgelsveeieegllkieehs.liveaafspdGtalatasedGevkffq 215
                 ++ +e +++++ ++++++   +  +++++l  +++h   +++  fsp G  l   s d +v+++ 
  KHJ33179.1 244 WNPMEAFNFAVANEDHNIYIFDMRKMTRALNVLKDHVaAVMDIEFSPTGEELVSGSYDRTVRLWS 308
                 667899**********************99999999559***********************995 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.086
    Ge1_WD40 188 sliveaafspdGtalatasedGevkffqvyled 220
                   + +  ++pd   +   s dG +++++ + ++
  KHJ33179.1 324 QRVFSCRWTPDAKFILSGSDDGNIRLWRANASK 356
                 457778889999999999*******99987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1145  (0.063863); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 3177.37
//
Query:       KHJ33180.1  [L=818]
Description: hypothetical protein EV44_g4587 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (818 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1052  (0.0586759); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 5765.16
//
Query:       KHJ33181.1  [L=316]
Description: putative glyoxylase i [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.1e-38  131.4   0.1    3.8e-19   69.1   0.1    2.2  2  Glyoxalase    Glyoxalase/Bleomycin resistance protein/Dioxyge
    1.2e-15   57.7   0.0    3.1e-06   27.4   0.0    3.5  3  Glyoxalase_4  Glyoxalase/Bleomycin resistance protein/Dioxyge
    6.4e-06   26.1   4.2        1.1    9.2   0.1    4.2  4  Glyoxalase_2  Glyoxalase-like domain
    6.5e-05   23.3   0.5      0.094   13.1   0.0    2.4  2  Pfk_N         Phosphofructokinase N-terminal domain yeast
    0.00083   20.1   0.0       0.21   12.4   0.0    3.1  2  Glyoxalase_6  Glyoxalase-like domain
      0.004   17.3   0.0        3.5    7.7   0.0    3.1  2  Glyoxalase_3  Glyoxalase-like domain
      0.006   16.6   0.6        0.4   10.8   0.1    2.6  2  CppA_N        CppA N-terminal
     0.0098   15.7   0.0       0.56   10.1   0.0    2.7  2  DUF3081       Protein of unknown function (DUF3081)
  ------ inclusion threshold ------
       0.14   12.1   0.0        4.4    7.3   0.0    2.7  3  MoaF          MoaF N-terminal domain


Domain annotation for each model (and alignments):
>> Glyoxalase  Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.1   0.1   1.9e-22   3.8e-19       1     128 []      12     144 ..      12     144 .. 0.89
   2 !   60.4   0.0   9.7e-20   1.9e-16       2     128 .]     166     306 ..     165     306 .. 0.93

  Alignments for each domain:
  == domain 1  score: 69.1 bits;  conditional E-value: 1.9e-22
                 EEEEEEEEESHHHHHHHHHHHHHTSEEEEEEEE......EEST..EEEEEEEEETTTSEEEEEEEECCTTSCTHHCCBSC....TSEEEEEEEEEHCHH CS
  Glyoxalase   1 gidhvallvgdleksldFYtkvLGfklvkktdn......teet..eglriaffhaggghielvlneapsgaakhvkkiee....tvhhvafialdvedv 87 
                 +++h++++v+d+ ks++FY+  LG+klv+k++          +  ++  i    + +g iel++n  +++++  v +  +     + ++++++ +v+++
  KHJ33181.1  12 KLNHTMIRVKDPNKSIKFYEF-LGMKLVRKYEQpearfdL--YfmGFDSIKHSSDREGLIELTHNYGTETDDDYVVS--TgndnPFLGFGHTCISVDNI 105
                 689****************98.**********76655441..15577788888999******************944..24578999************ PP

                 HHHHHHHHHTTGEEEEEEECHHCTEEEEEEEEETTSEEEEE CS
  Glyoxalase  88 gkaldrlkeagvkvvaepgrhyfgalysfyfrDpdGillei 128
                  +a+dr+++ag+++ +++++  ++++ +  ++DpdG+++ei
  KHJ33181.1 106 QAACDRIEKAGYSFQKKLNDGSMKNIAF--VTDPDGYWVEI 144
                 ***************************6..9*********7 PP

  == domain 2  score: 60.4 bits;  conditional E-value: 9.7e-20
                 EEEEEEEESHHHHHHHHHHHHHTSEEEEEEEE..............EEST.EEEEEEEEETTTSEEEEEEEECCTTSCTHHCCBSC.TSEEEEEEEEEH CS
  Glyoxalase   2 idhvallvgdleksldFYtkvLGfklvkktdn..............teet.eglriaffhaggghielvlneapsgaakhvkkiee.tvhhvafialdv 84 
                 ++h+ ++v+++e+sl+FY+++LG+kl+   +               +  t +  + + + + +g +el+++  ++  a + ++  + + +++++i+ +v
  KHJ33181.1 166 MNHTNIRVKNYEASLKFYQEILGMKLIGSLELkqenfnlyflgysnENITiTDKDLTSLASREGILELTWAYGTEQNAEFKYHNGNdKPQGFGHICISV 264
                 79**************************99999999********99444458888999**********************96644369*********** PP

                 CHHHHHHHHHHHTTGEEEEEEECHHCTEEEEEEEEETTSEEEEE CS
  Glyoxalase  85 edvgkaldrlkeagvkvvaepgrhyfgalysfyfrDpdGillei 128
                 ++++ a++r++   vk  + +    ++++ +    DpdG+++e+
  KHJ33181.1 265 DNLENACQRFENLNVKWKKRLVEGRMKNIAF--LLDPDGYWIEV 306
                 ******************************6..9********96 PP

>> Glyoxalase_4  Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   1.6e-09   3.1e-06       2     101 ..      15     126 ..      14     134 .. 0.78
   2 !   24.1   0.0   1.7e-08   3.3e-05       1      92 [.     167     280 ..     167     295 .. 0.78
   3 !   13.5   0.0   3.2e-05     0.063       2      55 ..     259     309 ..     258     312 .. 0.85

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 1.6e-09
                   EEEEE-S-HHHHHHHHHH.TT-EESS--E.EETTTTEEEEEEEETT......EEEEEEEESSTT.......-THHH....TS-EEEEEEEEES-HHH CS
  Glyoxalase_4   2 QigivVeDleaavarfsallGvgpwqryrdepqevdlafallgsgs......vqieLieplegp.......eflae....hgeglhhlaywvddlda 81 
                   ++ i V+D  + +++++  lG++  ++y+++++++dl+f+   s +        ieL ++  ++       +           g+ h ++ vd+++a
    KHJ33181.1  15 HTMIRVKDPNKSIKFYE-FLGMKLVRKYEQPEARFDLYFMGFDSIKhssdreGLIELTHNYGTEtdddyvvS---TgndnPFLGFGHTCISVDNIQA 107
                   89999************.7******************88766554333445666888887776556544553...04446889************** PP

                   HHHHHCTTTEEEEEEEE-GG CS
  Glyoxalase_4  82 avarleeqGfevvqkgvrag 101
                   a++r e++G+++ qk+ ++g
    KHJ33181.1 108 ACDRIEKAGYSF-QKKLNDG 126
                   **********95.5555555 PP

  == domain 2  score: 24.1 bits;  conditional E-value: 1.7e-08
                   EEEEEE-S-HHHHHHHHHH.TT-EESS--E.EETTTTEEEEEEEETTEEE...EEEEESSTT...........-THHH...........TS-EEEEE CS
  Glyoxalase_4   1 dQigivVeDleaavarfsallGvgpwqryrdepqevdlafallgsgsvqi...eLieplegp...........eflae...........hgeglhhl 72 
                   +++ i V++ ea +++++++lG++ +   + ++++++l+f+ ++++++ i   +L +  + +           e   +           +  g+ h+
    KHJ33181.1 167 NHTNIRVKNYEASLKFYQEILGMKLIGSLELKQENFNLYFLGYSNENITItdkDLTSLASREgileltwaygtE---QnaefkyhngndKPQGFGHI 260
                   59999******************************999999998988777555455544444455544444431...0445666688999******* PP

                   EEEES-HHHHHHHHCTTTEE CS
  Glyoxalase_4  73 aywvddldaavarleeqGfe 92 
                   ++ vd+l+ a++r+e+  ++
    KHJ33181.1 261 CISVDNLENACQRFENLNVK 280
                   **************998776 PP

  == domain 3  score: 13.5 bits;  conditional E-value: 3.2e-05
                   EEEEE-S-HHHHHHHHHH.TT-EESS--E.EETTTTEEEEEEEETTEEEEEEEE CS
  Glyoxalase_4   2 QigivVeDleaavarfsallGvgpwqryrdepqevdlafallgsgsvqieLiep 55 
                   +i+i V++le a +rf++ l+v +w++  +e +  ++af+l  +g   ie+i++
    KHJ33181.1 259 HICISVDNLENACQRFEN-LNV-KWKKRLVEGRMKNIAFLLDPDG-YWIEVIQN 309
                   9****************9.**8.5555567777778999999999.78999987 PP

>> Glyoxalase_2  Glyoxalase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.1   0.00075       1.5       3     113 ..      15     144 ..      13     147 .. 0.62
   2 !    9.2   0.1   0.00056       1.1       6      27 ..     171     192 ..     166     198 .. 0.86
   3 ?   -1.3   0.0      0.97   1.9e+03      59      68 ..     198     207 ..     190     235 .. 0.69
   4 !    6.3   0.0    0.0044       8.8      68     114 ..     263     307 ..     246     312 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00075
                   ----EES-HHHHHHHHHHTT---EEEE-....SSEEEETTS-.EE.....EEHHHHHH.....----..---S--SS-EEEE.....EES-HHHHHH CS
  Glyoxalase_2   3 lillvvkdieeskkFYedvlelkikldf....Genvsfetgf.al.....kedlkeli.....nlde..siaeqsnnfeLyF.....evedvdaflq 77 
                    +++ vkd ++s kFYe  l +k+   +     ++  +  gf ++     +e+l el+     ++d+   + +  +n  L+F      v++++a+ +
    KHJ33181.1  15 HTMIRVKDPNKSIKFYE-FLGMKLVRKYeqpeARFDLYFMGFdSIkhssdREGLIELThnygtETDDdyVVSTGNDNPFLGFghtciSVDNIQAACD 110
                   67889999999999997.4555554443111144555666776675544444455555666543333224555778888999433334689999999 PP

                   HH..GGGS-EEEEEEE-TTS-EEEEEE-TT--EEEE CS
  Glyoxalase_2  78 klkeaeniellhelkekpWgqrvirfyDpDkhiiEi 113
                   ++++a+   + ++l+     + ++ + DpD+  +Ei
    KHJ33181.1 111 RIEKAG-YSFQKKLNDG-SMKNIAFVTDPDGYWVEI 144
                   997776.5555555544.456799999****99998 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00056
                   -EES-HHHHHHHHHHTT---EE CS
  Glyoxalase_2   6 lvvkdieeskkFYedvlelkik 27 
                   + vk+ e s kFY+++l +k++
    KHJ33181.1 171 IRVKNYEASLKFYQEILGMKLI 192
                   789***************9975 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.97
                   --SS-EEEEE CS
  Glyoxalase_2  59 qsnnfeLyFe 68 
                   +++nf+LyF 
    KHJ33181.1 198 KQENFNLYFL 207
                   6788999984 PP

  == domain 4  score: 6.3 bits;  conditional E-value: 0.0044
                   EES-HHHHHHHH..GGGS-EEEEEEE-TTS-EEEEEE-TT--EEEEE CS
  Glyoxalase_2  68 evedvdaflqklkeaeniellhelkekpWgqrvirfyDpDkhiiEig 114
                    v++++++ q++ e+ n+++ ++l e    + ++ + DpD+  iE+ 
    KHJ33181.1 263 SVDNLENACQRF-ENLNVKWKKRLVEGRM-KNIAFLLDPDGYWIEVI 307
                   689999999999.5556999998888776.579999*********95 PP

>> Pfk_N  Phosphofructokinase N-terminal domain yeast
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.0   4.7e-05     0.094      17      53 ..      24      59 ..      13      66 .. 0.81
   2 !    7.9   0.1     0.002         4      14      50 ..     174     212 ..     165     218 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.7e-05
       Pfk_N 17 eelikfYkklGfkvvksyskeantkselkGvstdslk 53
                +++ikfY+ lG+k+v++y++ +  + +l  +  ds+k
  KHJ33181.1 24 NKSIKFYEFLGMKLVRKYEQPE-ARFDLYFMGFDSIK 59
                679***************9987.56677666677776 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.002
       Pfk_N  14 ekyeelikfYkk.lGfkvvksyskeant.kselkGvstd 50 
                 ++ye+++kfY++ lG+k++ s + ++++ +    G s++
  KHJ33181.1 174 KNYEASLKFYQEiLGMKLIGSLELKQENfNLYFLGYSNE 212
                 79********9857*****99986655413344676665 PP

>> Glyoxalase_6  Glyoxalase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0    0.0001      0.21      60     101 ..      96     139 ..      15     145 .. 0.66
   2 ?    4.3   0.0     0.034        67       6     101 ..     173     301 ..     168     307 .. 0.56

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.0001
  Glyoxalase_6  60 vHldlavedldaevarlvalGArvlreprdgthgr..vlaDPeG 101
                    H+ ++v++++a+++r++++G + +++ +dg  ++   ++DP+G
    KHJ33181.1  96 GHTCISVDNIQAACDRIEKAGYSFQKKLNDGSMKNiaFVTDPDG 139
                   69******************************999********9 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.034
  Glyoxalase_6   6 aadpaalaaFwaaalgweveree................................aaledpegvgpaaedaatllfqrvpe..............pa 56 
                   +++ +a  +F++++lg+++                                    + + +            t +                    + 
    KHJ33181.1 173 VKNYEASLKFYQEILGMKLIGSLelkqenfnlyflgysnenititdkdltslasrEGILE---------L--TWAY----GteqnaefkyhngndKP 254
                   566777788888888887766665666666666666666664444433322222211111.........1..1111....01122335553333322 PP

  Glyoxalase_6  57 knrvHldlavedldaevarlvalGArvlreprdgthgr..vlaDPeG 101
                   +   H+ ++v++l+ +++r ++l  +  ++  +g+ ++   l DP+G
    KHJ33181.1 255 QGFGHICISVDNLENACQRFENLNVKWKKRLVEGRMKNiaFLLDPDG 301
                   33478888888888888888888777777777776666777777777 PP

>> Glyoxalase_3  Glyoxalase-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0076        15       1     101 [.      13     118 ..      13     187 .. 0.63
   2 !    7.7   0.0    0.0018       3.5       3      53 ..     259     308 ..     253     311 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0076
  Glyoxalase_3   1 lDHvvlavpdleeaaarfarrlGftvtpggehpglgtaNalvmfgd........gYlElla.vdpeapaperprlfgldrlakgeglhtlalrtddi 88 
                   l H+++ v+d+++ ++ + + lG++++ + e p+     + + f+         g +El   +  e++    +  ++ +  +   g+ + ++++d+i
    KHJ33181.1  13 LNHTMIRVKDPNKSIKFY-EFLGMKLVRKYEQPEARFDLYFMGFDSikhssdreGLIELTHnYGTETDD---DYVVSTGNDNPFLGFGHTCISVDNI 105
                   568888888888877765.88888888777777754444444444333333333344444422222222...3333333333446777778888888 PP

  Glyoxalase_3  89 dataarlraaGvd 101
                   +a+ +r ++aG++
    KHJ33181.1 106 QAACDRIEKAGYS 118
                   8888888887765 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0018
  Glyoxalase_3   3 HvvlavpdleeaaarfarrlGftvtpggehpglgtaNalvmf.gdg.YlElla 53 
                   H+ + v++le+a +rf + l+++  ++ +  +   +N  + + +dg  +E+++
    KHJ33181.1 259 HICISVDNLENACQRF-ENLNVKWKKRLVEGR--MKNIAFLLdPDGyWIEVIQ 308
                   ****************.887888777666666..7888888866776799886 PP

>> CppA_N  CppA N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.033        66       3      28 ..      15      39 ..      13      48 .. 0.86
   2 !   10.8   0.1    0.0002       0.4       5      28 ..     170     193 ..     166     217 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.033
      CppA_N  3 tpvlrvnnrdlniafyqetlGlklls 28
                + ++rv + ++ i+fy e lG+kl+ 
  KHJ33181.1 15 HTMIRVKDPNKSIKFY-EFLGMKLVR 39
                5689************.68****996 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.0002
      CppA_N   5 vlrvnnrdlniafyqetlGlklls 28 
                  +rv n +   +fyqe lG+kl+ 
  KHJ33181.1 170 NIRVKNYEASLKFYQEILGMKLIG 193
                 689******************984 PP

>> DUF3081  Protein of unknown function (DUF3081)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   0.00028      0.56      11      51 ..     110     154 ..     100     182 .. 0.75
   2 ?    2.7   0.0     0.054   1.1e+02      11      44 ..     275     308 ..     267     314 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00028
     DUF3081  11 ekvktkGekt...eneyklegieatedfDGYtvfL.adkdvsltl 51 
                 +++++ G  +    n+  +++i  ++d+DGY v +  +++v+lt 
  KHJ33181.1 110 DRIEKAGYSFqkkLNDGSMKNIAFVTDPDGYWVEIiGQRNVDLTQ 154
                 67777776551114557899************9751567888875 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.054
     DUF3081  11 ekvktkGekteneyklegieatedfDGYtvfLad 44 
                 e+++ k +k+  e  +++i    d+DGY + + +
  KHJ33181.1 275 ENLNVKWKKRLVEGRMKNIAFLLDPDGYWIEVIQ 308
                 55555555666666788999999*****987655 PP

>> MoaF  MoaF N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.3   4.5e+03      62      76 ..      39      53 ..       8      65 .. 0.67
   2 ?    1.3   0.0      0.16   3.1e+02      54      83 ..     120     149 ..      97     164 .. 0.80
   3 ?    7.3   0.0    0.0022       4.4      42      82 ..     272     310 ..     262     314 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.3
                EE-EEEECCTTEEEE CS
        MoaF 62 aeyeatevregiYfv 76
                 +ye  e r ++Yf 
  KHJ33181.1 39 RKYEQPEARFDLYFM 53
                456666667777776 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.16
                 TTTTEEEEEE-EEEECCTTEEEEEEEETTS CS
        MoaF  54 eekeesgeaeyeatevregiYfvdflkker 83 
                 ++k + g+ +  a+  +++ Y+v+++ + +
  KHJ33181.1 120 QKKLNDGSMKNIAFVTDPDGYWVEIIGQRN 149
                 5577889999999999*******9997765 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0022
                 ..EETTEEEEEETTTTEEEEEE-EEEECCTTEEEEEEEETT CS
        MoaF  42 effdadtlrWteeekeesgeaeyeatevregiYfvdflkke 82 
                 + f++ +++W++  +  +g+ +  a+ ++++ Y+++++++e
  KHJ33181.1 272 QRFENLNVKWKK--RLVEGRMKNIAFLLDPDGYWIEVIQNE 310
                 44688899****..99*********************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       548  (0.030565); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2354.97
//
Query:       KHJ33182.1  [L=168]
Description: putative mitochondrial import receptor subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-44  150.3   0.2    3.2e-44  150.1   0.2    1.0  1  MAS20     MAS20 protein import receptor
     0.0065   16.8   0.7        1.2    9.5   0.7    2.5  1  Nif11     Nif11 domain
  ------ inclusion threshold ------
       0.14   12.1   1.3       0.21   11.5   1.3    1.2  1  RRF       Ribosome recycling factor
       0.17   12.4   0.0        0.2   12.2   0.0    1.2  1  Cas_Cas6  CRISPR associated protein Cas6
       0.18   11.3   0.0         11    5.5   0.0    2.0  2  TMEM219   Transmembrane 219


Domain annotation for each model (and alignments):
>> MAS20  MAS20 protein import receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.1   0.2     9e-48   3.2e-44       2     128 ..      13     143 ..      12     144 .. 0.97

  Alignments for each domain:
  == domain 1  score: 150.1 bits;  conditional E-value: 9e-48
       MAS20   2 gvaaaaflgYcvYFDrkRrsdpefkkklrerrkkqakaakeeeeaekaekkk..kealeeakee.lptdaeevekfFleevqlGEellaq.geeeeaae 96 
                 ++aa+++l Y+vYFD++Rr+dpef+++lr++ k+qa+aakee+e++  ++++  ++a+++ak+e +ptd  e+e++F+++v++GE l  + +e+ eaa+
  KHJ33182.1  13 STAATGLLTYAVYFDYRRRNDPEFRRQLRRNTKRQARAAKEEAESQIVRQRQdiEAAVKMAKAEgFPTDVGEKESYFMQQVARGEGLGISgNENIEAAL 111
                 689********************************************999999*99*******************************99978999**** PP

       MAS20  97 hlynAlkvcpqPqeLlqilqktlPeevfelll 128
                 ++y+Alkv+p+P++L++i+++t+P+ v+++l+
  KHJ33182.1 112 CFYKALKVYPTPSDLISIYDRTVPKAVLDILA 143
                 ******************************97 PP

>> Nif11  Nif11 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.7   0.00033       1.2      16      42 ..      33      79 ..      23      84 .. 0.58

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00033
       Nif11 16 Dpalreqlkacsdheev....................valAkeaGye 42
                Dp++r ql+  ++++++                    v++Ak++G+ 
  KHJ33182.1 33 DPEFRRQLRRNTKRQARaakeeaesqivrqrqdieaaVKMAKAEGFP 79
                55555555555544444444444444444444444449999999996 PP

>> RRF  Ribosome recycling factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.3   5.9e-05      0.21      88     141 ..      38      92 ..      32      97 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 5.9e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC.S-HHHHHHHHHHHHH CS
         RRF  88 eErrkelvkeakkaaekakvairniRrdankklkklekk.iseDdvkkaekeiqk 141
                 ++ r+++ ++a++a e+a  +i + R+d++ ++k ++ + + +D  +k    +q+
  KHJ33182.1  38 RQLRRNTKRQARAAKEEAESQIVRQRQDIEAAVKMAKAEgFPTDVGEKESYFMQQ 92 
                 5679999**************************8665556999988877766666 PP

>> Cas_Cas6  CRISPR associated protein Cas6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   5.6e-05       0.2      57      85 ..      25      62 ..       5     116 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.6e-05
                EE...-TTSTTHHHHHHHHHHHHHHHHHSS........ CS
    Cas_Cas6 57 yl...spddeeFsellkenlkkkykalygee......k 85
                y+   + +d+eF ++l++n+k++ +a  +e       +
  KHJ33182.1 25 YFdyrRRNDPEFRRQLRRNTKRQARAAKEEAesqivrQ 62
                3322255****************999987765544442 PP

>> TMEM219  Transmembrane 219
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0    0.0091        32      10      42 ..       4      36 ..       3      42 .. 0.89
   2 ?    5.5   0.0     0.003        11      77     135 ..      50     108 ..      37     118 .. 0.68

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0091
     TMEM219 10 PlvvFlvcllllaitllslgvyikvkelknpdi 42
                P  v  ++l+  a +ll+ +vy+     ++p+ 
  KHJ33182.1  4 PSTVVAITLSTAATGLLTYAVYFDYRRRNDPEF 36
                6678899*****************999999985 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.003
     TMEM219  77 lsesvasaelsaslknvsvaieltlllsksfvgl.snnvtllsatvkGselGlkGaaake 135
                 +++  a+++ +++ +++  a+++      + +++ +++++ ++  ++G+ lG++G++  e
  KHJ33182.1  50 AAKEEAESQIVRQRQDIEAAVKMAKAE-GFPTDVgEKESYFMQQVARGEGLGISGNENIE 108
                 444455556666669999999998554.3344331566777888889********88655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1465  (0.0817112); expected 358.6 (0.02)
Passed bias filter:                      975  (0.0543812); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.28s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 1296.92
//
Query:       KHJ33183.1  [L=649]
Description: putative exocyst complex component exo84 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-65  220.6   2.3    1.8e-65  220.6   2.3    2.3  3  Exo84_C       Exocyst component 84 C-terminal
    8.5e-12   45.0   4.5    8.5e-12   45.0   4.5    2.3  3  Vps51         Vps51/Vps67
  ------ inclusion threshold ------
       0.27   10.8   7.7       0.82    9.2   3.4    2.3  2  Exonuc_VII_L  Exonuclease VII, large subunit
        0.8   10.2  12.3       0.35   11.4   5.3    2.5  2  APG6_N        Apg6 coiled-coil region
        1.7    8.7   4.8       0.41   10.7   1.2    1.9  2  Spore_III_AB  Stage III sporulation protein AB (spore_III_AB)
        2.5    8.5  10.7       0.34   11.3   2.0    2.5  3  Fez1          Fez1
        4.1    8.2   7.9         14    6.5   4.2    2.3  2  BBP1_N        Spindle pole body component BBP1, Mps2-binding 


Domain annotation for each model (and alignments):
>> Exo84_C  Exocyst component 84 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.7      0.51   1.3e+03      32      79 ..     141     188 ..     127     205 .. 0.50
   2 ?   -3.4   0.2       2.7   6.9e+03      54      74 ..     377     397 ..     362     404 .. 0.46
   3 !  220.6   2.3   7.2e-69   1.8e-65       1     204 [.     441     640 ..     441     641 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.51
     Exo84_C  32 klkklskklkdeeavlqdlislkveqrreelasklsrel.lsknevkkl 79 
                  +++++++l++ + ++++ ++ +  q+r++l++ +s+e    k+e+ +l
  KHJ33183.1 141 DINDYQRSLQNLRDRASKDLQQNFYQNRRQLIK-ISKEAeKLKEEMRAL 188
                 444555555554444555555555555555553.333220233333333 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.7
     Exo84_C  54 kveqrreelasklsrellskn 74 
                 + ++++eel + l  e+ ++n
  KHJ33183.1 377 NFKKQVEELRKGLRSEMETSN 397
                 333333444433333333333 PP

  == domain 3  score: 220.6 bits;  conditional E-value: 7.2e-69
     Exo84_C   1 rwvedlldeldieiarrkFeeAVdlleklesklkklskklkdeeavlqdlislkveqrreelasklsrellsk.nevkklksnvslLirLgledkArel 98 
                 rw+e+++d ldi+ia ++F+ AV l+e    k ++l+k+lk++ +v+q++is+k+++r+++la  +++el+++ n  kk+k nv++L+rLg+ed+Are+
  KHJ33183.1 441 RWIESQVDSLDIDIALQRFDAAVVLIE----KFNSLAKSLKSN-VVAQEFISFKTSERATKLAGLITKELVENhNLPKKVKCNVNWLTRLGFEDRAREV 534
                 7*************************8....588999999997.89************************976156788******************** PP

     Exo84_C  99 fLenrsnliqkrirqikfegdlslYitqlavvrFtlikntveefqecFkenkskmsSalvkWakeevdkfvkllerqllndeklse...ecikiarkqa 194
                 +Le+rs++i+kr+rq+ fegdl+   +++++++Ft+i+ntv  fq cF+    +++Sa+vkW+keev+ f+ +l rql++++++s+    c+++ar++a
  KHJ33183.1 535 YLETRSDIIRKRSRQCIFEGDLHRHTWEVSFIYFTIIRNTVITFQMCFPS---SLMSACVKWVKEEVEGFNTILLRQLSSTKRGSStwdLCLNQAREHA 630
                 *************************************************8...8**************************9996652326********* PP

     Exo84_C 195 deLkevGLDf 204
                 + L evGLDf
  KHJ33183.1 631 NILFEVGLDF 640
                 *********9 PP

>> Vps51  Vps51/Vps67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   4.5   3.3e-15   8.5e-12       1      84 [.     119     202 ..     119     205 .. 0.95
   2 ?   -2.9   0.2         3   7.6e+03      22      39 ..     380     397 ..     369     405 .. 0.59
   3 ?   -2.2   0.1       1.8   4.5e+03      16      43 ..     414     441 ..     412     447 .. 0.64

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 3.3e-15
       Vps51   1 ldspdfdaeayvrellakstlkellkveasllseiraldselkalVydnYskLisasdtIrkmksemdkldqklselkqaiski 84 
                 l++p+  ++ ++++ll  ++ +++  +++sl+    +  ++l+++ y+n ++Li++s++ +k+k+em+ l++ +s+lk + + +
  KHJ33183.1 119 LQDPNLRPDIFIASLLDDASEQDINDYQRSLQNLRDRASKDLQQNFYQNRRQLIKISKEAEKLKEEMRALKNLMSDLKINTTAL 202
                 5789999***********************************************************************998765 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3
       Vps51  22 kellkveasllseirald 39 
                 k++ ++++ l+se ++ +
  KHJ33183.1 380 KQVEELRKGLRSEMETSN 397
                 455555555555555554 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 1.8
       Vps51  16 lakstlkellkveasllseiraldselk 43 
                 l+k++l e+l   +++l ei  ++++l+
  KHJ33183.1 414 LKKADLLETLSDVKDMLIEIDGKQQNLR 441
                 5566666666666666666666666655 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   3.4   0.00032      0.82     140     221 ..     140     220 ..     132     275 .. 0.60
   2 ?    3.3   0.1      0.02        50     180     267 ..     370     458 ..     325     494 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00032
  Exonuc_VII_L 140 pdkaeleeqleelerrlekaikrlleekkqrleklasrlkspeellerkrqrldeleerleralkkqlkkkrerleelkerl 221
                   +d+++++++l++l++r +k +++++ +++++l k++++ ++ +e +++ ++ +++l+ + ++ l+ + +++++++e + + +
    KHJ33183.1 140 QDINDYQRSLQNLRDRASKDLQQNFYQNRRQLIKISKEAEKLKEEMRALKNLMSDLKINTTA-LRAASSQNNTDFEGFVSGM 220
                   46788899999999999999999999999998888766644444444444443333333333.3333333333333333222 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.02
  Exonuc_VII_L 180 speellerkrqrldeleerleralkkqlkkkrerleelkerlk..ekleekkerlkklkerlelleekkerleeleeklealsplkvLkr 267
                   ++++l+ + +++++el++ l+++++ + +k++e+l+ +++r     k ++  e+l+++k+ l +++ k+++l+ +e+++++l+ + +L+r
    KHJ33183.1 370 EKQSLIINFKKQVEELRKGLRSEME-TSNKSKETLNYFASRDPglLKKADLLETLSDVKDMLIEIDGKQQNLRWIESQVDSLDIDIALQR 458
                   4455666667777777777777444.4445555555555333223222233344455555555789999999999999999988888877 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   5.3   0.00014      0.35      20     103 ..     137     218 ..     133     233 .. 0.85
   2 ?    2.5   0.6     0.079     2e+02      12      85 ..     387     455 ..     371     464 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00014
      APG6_N  20 qaekerdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwr 103
                 ++e+++++Y++ l++l+++++++   +++  + +++l k++ke e+l ee+++l++  ++l+    al++ +++ + + e f++
  KHJ33183.1 137 ASEQDINDYQRSLQNLRDRASKDL--QQNFYQNRRQLIKISKEAEKLKEEMRALKNLMSDLKINTTALRAASSQNNTDFEGFVS 218
                 68999**************88865..7889999999999999999999999999999999999999999988888877777765 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.079
      APG6_N  12 eeldkqleqaekerdaYeeflkklkkekkeeek.........qdeeleeleeeleklekeeeelleeLkelekereeleaela 85 
                 ++l +++e+++k +++++                        ++ +l e+  +++++  e + ++++L+ +e++ ++l+ ++a
  KHJ33183.1 387 KGLRSEMETSNKSKETLN--------------YfasrdpgllKKADLLETLSDVKDMLIEIDGKQQNLRWIESQVDSLDIDIA 455
                 333333333333333333..............144455555566788888888999999999999999999999999998876 PP

>> Spore_III_AB  Stage III sporulation protein AB (spore_III_AB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.2   0.00016      0.41      24      99 ..     165     246 ..     132     253 .. 0.80
   2 ?   -3.9   0.1         5   1.3e+04     134     148 ..     380     394 ..     369     409 .. 0.51

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00016
                   XHHHHHHHHHHHHHHHHHHHHHH-SS-HHH......HHHHHHHCS-TTHHHHHHHHHHHHH.STSS-HHHHHHHHHHHHGGG CS
  Spore_III_AB  24 krrlkeleelkralellegeirygatpLpe......aleklaeksesplseffeevaerleekegesfeeaweeavekllkk 99 
                    +  ++l ++ +  e l+ e+r  ++ + +      al+  +++ + +++ f++ +++r ++++  + + +w+++++ l+k 
    KHJ33183.1 165 YQNRRQLIKISKEAEKLKEEMRALKNLMSDlkinttALRAASSQNNTDFEGFVSGMSKREKRSSVADRTAIWNSQLQALWKM 246
                   555566666666666667777766666655555555778888888899999********7778***************9986 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 5
                   HHHHHHHHHHHHHHH CS
  Spore_III_AB 134 eeleeeieeareeak 148
                   +++ee  + +r e++
    KHJ33183.1 380 KQVEELRKGLRSEME 394
                   333333333333333 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   2.0   0.00013      0.34      40     134 ..     142     244 ..     137     277 .. 0.74
   2 ?    1.9   0.5      0.11   2.7e+02     127     156 ..     372     401 ..     336     410 .. 0.69
   3 ?    1.1   1.7      0.19   4.8e+02      31      61 ..     373     403 ..     361     518 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00013
        Fez1  40 lrelraklee.keeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaalesdeakaqrqe........aee 129
                 + + + +l++ ++++ k+l++++ +  ++l ++ +e ++ k+e   l++ ++ l+ +++ lr + s+++ ++ e  ++ ++++++r++        +++
  KHJ33183.1 142 INDYQRSLQNlRDRASKDLQQNFYQNRRQLIKISKEAEKLKEEMRALKNLMSDLKINTTALRAASSQNN-TDFEGFVSGMSKREKRSSvadrtaiwNSQ 239
                 55666677653688899999999999999********************************99777754.55666666666677776654444444334 PP

        Fez1 130 leelk 134
                 l++l 
  KHJ33183.1 240 LQALW 244
                 44444 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.11
        Fez1 127 aeeleelkreverlraeLkeerqkkeeqas 156
                 ++ + + k++ve+lr+ L+ e +++++ ++
  KHJ33183.1 372 QSLIINFKKQVEELRKGLRSEMETSNKSKE 401
                 344556677777777777777666655443 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.19
        Fez1  31 seivalkaqlrelrakleekeeeikeleesl 61 
                 s i++ k q+ elr+ l+++ e+ ++ +e+l
  KHJ33183.1 373 SLIINFKKQVEELRKGLRSEMETSNKSKETL 403
                 4444444444444444444444444444333 PP

>> BBP1_N  Spindle pole body component BBP1, Mps2-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   4.2    0.0054        14      48     132 ..     147     232 ..     132     242 .. 0.67
   2 ?    2.7   0.1     0.076     2e+02      42      75 ..     390     432 ..     376     490 .. 0.68

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0054
      BBP1_N  48 seesrsRsnSwsgldssfyk.kydLLedseeeeqddskrkkklesLlspvelkpkevsneankeptD..TFankknnnrskaesldde 132
                 ++ ++ R  + + l+++fy+ + +L++ s+e e+  +++ + l++L+s  ++++ +   ++ +++tD   F     ++r+k +s+ d+
  KHJ33183.1 147 RSLQNLRDRASKDLQQNFYQnRRQLIKISKEAEK-LKEEMRALKNLMSDLKINTTALRAASSQNNTDfeGFVSG-MSKREKRSSVADR 232
                 3333444444456899999735677777555555.58888999***********99999999999993346655.4555555555554 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.076
      BBP1_N  42 knkeksseesrsRsnSwsgldssfykkydLLed.........s 75 
                 ++++++s++s+   n +   d+ + kk dLLe          +
  KHJ33183.1 390 RSEMETSNKSKETLNYFASRDPGLLKKADLLETlsdvkdmliE 432
                 44455556666666778899***********993333333331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1443  (0.0804841); expected 358.6 (0.02)
Passed bias filter:                      695  (0.038764); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 4392.55
//
Query:       KHJ33184.1  [L=4363]
Description: putative dynein heavy cytoplasmic [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     3e-126  420.8   0.4   1.9e-125  418.2   0.0    2.7  2  AAA_6           Hydrolytic ATP binding site of dynein motor r
     6e-123  411.4   9.6     6e-123  411.4   9.6    4.6  3  DHC_N1          Dynein heavy chain, N-terminal region 1
   4.3e-116  388.3   8.1   4.3e-116  388.3   8.1    5.1  3  DHC_N2          Dynein heavy chain, N-terminal region 2
    2.8e-73  245.7   0.6    2.8e-73  245.7   0.6    4.0  3  AAA_9           ATP-binding dynein motor region
    1.7e-66  224.2   0.0    6.4e-66  222.3   0.0    2.1  1  AAA_8           P-loop containing dynein motor region D4
    1.1e-42  145.6   0.0    5.4e-36  123.8   0.0    4.6  4  AAA_7           P-loop containing dynein motor region
    5.5e-39  134.2  11.2    1.1e-38  133.2  11.2    1.4  1  MT              Microtubule-binding stalk of dynein motor
    5.1e-30  104.3   0.1    4.7e-11   42.8   0.0    6.6  5  AAA_5           AAA domain (dynein-related subfamily)
    9.1e-30  103.2   0.0    6.2e-28   97.3   0.0    3.4  2  Dynein_heavy    Dynein heavy chain region D6 P-loop domain
    2.5e-26   92.4   0.0    6.2e-26   91.2   0.0    1.7  1  AAA_lid_11      Dynein heavy chain AAA lid domain
      5e-16   59.2   2.7     0.0064   16.8   0.0    6.8  6  AAA_22          AAA domain
    2.7e-14   53.3   0.1    1.5e-13   51.0   0.0    2.4  1  Dynein_AAA_lid  Dynein heavy chain AAA lid domain
    1.2e-13   51.6   0.0     0.0021   18.5   0.0    5.4  4  AAA             ATPase family associated with various cellula
    1.6e-09   38.1   0.3       0.43   10.7   0.0    5.0  4  AAA_33          AAA domain
    7.3e-09   36.2   1.7        1.8    8.9   0.0    6.6  5  AAA_16          AAA ATPase domain
      1e-08   35.8   1.1      0.016   15.7   0.0    5.7  4  AAA_18          AAA domain
    7.2e-08   32.6   0.5    0.00011   22.4   0.0    3.7  2  AAA_lid_1       AAA+ lid domain
    6.7e-06   25.4   0.0      0.035   13.2   0.0    3.6  3  T2SSE           Type II/IV secretion system protein
    0.00027   20.4   1.1          1    8.7   0.0    3.9  3  Mg_chelatase    Magnesium chelatase, subunit ChlI
    0.00045   20.0   1.8       0.41   10.3   0.0    4.9  5  IstB_IS21       IstB-like ATP binding protein
    0.00053   19.8   0.2         24    4.6   0.0    4.6  4  AAA_30          AAA domain
    0.00088   18.5  18.8    0.00088   18.5  18.8    2.4  1  Taxilin         Myosin-like coiled-coil protein
    0.00093   18.9   0.0        2.3    8.0   0.0    3.6  3  AAA_29          P-loop containing region of AAA domain
    0.00093   19.7   5.0        2.4    8.7   0.0    4.9  3  ABC_tran        ABC transporter
     0.0013   18.4   0.1       0.13   11.8   0.0    3.3  2  AAA_25          AAA domain
     0.0019   18.6   3.4       0.29   11.5   0.0    4.6  4  AAA_19          AAA domain
     0.0027   17.5   0.5         22    4.7   0.0    4.6  4  AAA_24          AAA domain
     0.0042   17.5   0.2         30    5.1   0.0    5.0  4  RNA_helicase    RNA helicase
     0.0051   16.9  14.0       0.23   11.6   0.0    5.9  4  COG2            COG (conserved oligomeric Golgi) complex comp
  ------ inclusion threshold ------
       0.01   15.2   1.0      0.088   12.2   0.0    2.6  2  TraF_2          F plasmid transfer operon, TraF, protein
      0.018   14.4   3.9        4.1    6.7   0.0    4.6  5  FtsK_SpoIIIE    FtsK/SpoIIIE family
      0.071   13.1   9.6       0.49   10.4   0.2    6.0  4  LOH1CR12        Tumour suppressor protein
       0.79    9.7   7.7        4.2    7.3   7.7    2.3  1  CHAD            CHAD domain
        1.8    8.6  16.3       0.15   12.1   3.2    4.2  3  DUF3867         Protein of unknown function (DUF3867)
        3.5    7.3  10.6        2.9    7.6   0.0    3.7  3  AAA_11          AAA domain
          6    6.8   6.8         32    4.4   0.0    4.0  3  NACHT           NACHT domain


Domain annotation for each model (and alignments):
>> AAA_6  Hydrolytic ATP binding site of dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  418.2   0.0  3.7e-128  1.9e-125       1     327 []    1913    2252 ..    1913    2252 .. 0.95
   2 ?   -2.6   0.1       4.2   2.1e+03     191     232 ..    3197    3239 ..    3193    3254 .. 0.79

  Alignments for each domain:
  == domain 1  score: 418.2 bits;  conditional E-value: 3.7e-128
       AAA_6    1 YgyeYlgnserLviTpltdrcyltltqAlklklggapaGpagtGKtEtvkdLakalakqvvvfncsdqldykslgkifkGlaqsGaWgCfdeFnrie 97  
                  Yg+eYlg++erLv Tpltdrc+ltltqAl  +lgg+p+GpagtGKtE+vk L+ +l+++++vf c+d++d++s+g+if G++q+GaWgCfdeFnr+e
  KHJ33184.1 1913 YGFEYLGVTERLVRTPLTDRCFLTLTQALCQRLGGSPYGPAGTGKTESVKALGVQLGRFTLVFCCDDTFDFQSMGRIFLGICQVGAWGCFDEFNRLE 2009
                  9************************************************************************************************ PP

       AAA_6   98 levLSvvaqqiktiqqalke....kkkkfvfegkeiklnksvgifitmnpgyagrteLPdnLkalfRpvammvPdlelIaeimLfseGfkeakelak 190 
                   ++LS+v+qq+++iq  lk+     k+++++ g++ik+++++gifit+npgyagr++LPdnLk+lfR+vam  Pd elIae+mL+s+Gf++ak+l+k
  KHJ33184.1 2010 ERILSAVSQQLQNIQLGLKKgiqdAKSQIELLGRQIKVDTNTGIFITLNPGYAGRSNLPDNLKKLFRSVAMSKPDKELIAEVMLYSQGFSQAKNLSK 2106
                  **************976554221178899******************************************************************** PP

       AAA_6  191 klvtlykllseqlskqdhydfglralksvlkaagelkre.....epees....eeelllralrdvnlpklvaeDvplfkglisdlFpgvelpesdye 278 
                  + v +++ +s +lskq hydfglralksvl+  g+lkr      +++ +    e +++++++r++  pkl+++Dv++++++ ++ Fpgv  +  + +
  KHJ33184.1 2107 QAVPFFDKCSAMLSKQAHYDFGLRALKSVLVSSGSLKRVrlvsqTKNLTedefEPQIIVQSIRETIAPKLIKSDVEIMRSIEAESFPGVYYHPANLD 2203
                  *************************************9755543222222334779***************************************** PP

       AAA_6  279 eleeaieevlkekklqleekfvekviqlyetlkvrhgvmlvGetgsgKt 327 
                  el++ai  +++ek+l ++e+++ k++qly++++++hgvm+vG++g+gK+
  KHJ33184.1 2204 ELKDAICYIAHEKNLVVNETWMLKILQLYQIQMIHHGVMMVGDSGTGKS 2252
                  ************************************************8 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 4.2
       AAA_6  191 klvtlykllseql.skqdhydfglralksvlkaagelkreepe 232 
                  ++v+ly+  +e l ++q+h + gl  l   +  + +l+ +  e
  KHJ33184.1 3197 QFVKLYEEKREDLeEQQRHLNVGLEKLRDTVDKVRDLRISLAE 3239
                  7899*********44678*******999998888888765444 PP

>> DHC_N1  Dynein heavy chain, N-terminal region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  411.4   9.6  1.2e-125    6e-123       1     557 [.     285     856 ..     285     860 .. 0.92
   2 ?    2.5   0.8      0.09        45     145     303 ..    1495    1667 ..    1489    1675 .. 0.71
   3 ?    1.3   0.3      0.21   1.1e+02     213     299 ..    3393    3519 ..    3360    3523 .. 0.73

  Alignments for each domain:
  == domain 1  score: 411.4 bits;  conditional E-value: 1.2e-125
      DHC_N1   1 vnaleslvieWikqIkevlkedsdgrkegplaEieFWrsreanLssieeqlkspevkkvlkvLkaakssyleafkaldtelkkaleeAkdnvkyLktLe 99 
                 +n+l+slv+ Wik+I+ ++k+++d+ ++++ +Ei+FW ++e++L++i +ql+ + v++++++Lk ak++ ++   ++dt+l++a++++++++++++++ 
  KHJ33184.1 285 LNSLQSLVNGWIKSIQGITKMSRDPGSGSATQEINFWLNMESALERIGTQLNGEGVRLTMEILKIAKRYQATVSFRIDTGLNEASDKVQKYNQLMRDF- 382
                 689*****************************************************************777767788*********************. PP

      DHC_N1 100 kpledLest.dleeikellpsllnairliwkiSryYntperivsLlekisnqlieqckkylnpeelfgqeveeaikklkeaielleawkeeyeektrek 197
                  pl++L+s+ +l++i+++l++++ +++++++i+  Y + +r++ L+e+is +l +q+++ l++++l++ e +e+++ + ++ ++++ w+e ++ +  + 
  KHJ33184.1 383 -PLDELLSAtSLSKIQDALNQIFAHLNKKLRIC-PY-PIRRALLLVEAISFDLNSQLHSLLHGRSLMHIEYREFKNLMLATESIWKVWDENVK-EFTNV 477
                 .******955***********************.**.9*****************************99999********************4.77766 PP

      DHC_N1 198 leespkekpwefdeksiFarldafleRlekllelfetieqfsklekv..ggtkgkelegq...................ieeileefeeaveklksksy 275
                  +e ++ ++ +f   +i  +   f  Rl+++  ++e++eq++k   +  g         +                   ++ ++e +++a++ l+  ++
  KHJ33184.1 478 AREVTRRRNEKFIPIKINPKHADFQARLKYVSIFRENHEQLQKTIVSvlGA--------KtgegknasneivlieemgdVDAVEE-VQQAYAALN--NV 565
                 666666677777777777788********************6554445422........12222333577999888888777666.899******..** PP

      DHC_N1 276 dvLdvsaee...feadfkeFkerikdlerrlqaiinqafedasslesalellrkfesllerpkikaaleekytdllqmykeeleavkklfekqkenps. 370
                 d+Ldv+ e+   + ++   ++er++++e++++a++++++++a++ ++++ ++ kf+ l+ rpki++a++e++t+l++++k+++ +++++f++q  + + 
  KHJ33184.1 566 DLLDVTPEGtriWVQAEITYNERTSRVENSIIARLRDRLATAKTSNEMFRVFSKFNALFVRPKIRGAITEYQTQLIDNVKRDISSLHERFKQQYGHSEs 664
                 *******************************************************************************************96555448 PP

      DHC_N1 371 .aplakn.mPpvaGaiiwarqlerrieepmekfee.egegllkteegkkvkkkynelakkLkeyerklfeeWleeveekseeklkrpLLvredettk.. 464
                  a+++ + +Ppv+Gaiiwarq+er+++ +m+++e+ +g++++ ++eg+k++++   ++kkL+  +r +fe+Wl++v++k+ + ++r L+++++  ++  
  KHJ33184.1 665 hAMAQLRdLPPVSGAIIWARQIERQLDGYMKRVEDvLGHDWALHSEGQKLQSESSLFRKKLD--TRPIFEAWLHDVQAKQISISGR-LFNINK-IRSan 759
                 99999999**************************99**************************..***********99888886666.****77.44457 PP

      DHC_N1 465 ...llevNFdpellallrEvkylqrlgfevPesakniakqeeklrkyaesLellvreynrilesllpver..pLlaeelkeldaklepGltklnWnsl 557
                     l+vNFdp+++al++E+++l +l+f vP+s++ni k++++++++a sL+++ r++ +i ++++++     Ll+++++e +  +++G+  l+W+s 
  KHJ33184.1 760 nllELSVNFDPQIIALFKETRNLLWLNFAVPHSINNISKEAKRVYPFAVSLMETTRTFAQISRKISQMADvsILLSGYINEAHGFIAKGTI-LKWESF 856
                 899889***********************************************************9987777*******************.****97 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.09
      DHC_N1  145 ekisnqlieqckkylnpee.......lfgqeveeaikklkeaielleawkeeyeektrekle......espkekpwefdeksiFarldafleRlekl 228 
                  e+i +++i+q++  +  ee       ++  +    + + ++  +l++ w++ +  k+ e+l+         ++   ef++++  +  +  l+R++ l
  KHJ33184.1 1495 EAIIKDIITQAQGEMALEEflkqvreVWT-NYPLELVNYQNKCRLIRGWDDLF-AKCSENLNslqamkH--SPYCKEFEDEA--SSWEDKLNRVHVL 1585
                  68999999999999999995555555553.22355667888889*********.5***99996643212..34445886555..6899********* PP

      DHC_N1  229 lel.fetieqfsklekv..ggtkgkelegq....ieeileefeeaveklksksydvLd.vsaeefeadfkeFkerikdlerrl 303 
                   ++ +++++q+  le v  g+  +k+l        ++i+ ef  +++k+ + ++ vLd ++ ++ ++  ++  e  +++++ l
  KHJ33184.1 1586 FDVwIDVQRQWVYLEGVftGNADIKHLLPIessrFQNINSEFFALMKKVCKQPF-VLDvLNISGVQKSLERLAELLNKIQKAL 1667
                  *99457888999999999876777777665667799999999999999985555.7773444446666666666655555555 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.21
      DHC_N1  213 siFarldafleRlekllelfetieqf.......................................sklekvggtkgkelegqieeileefeeavekl 270 
                    F++++   + +  l + ++++ ++                                       ++++k + +    l +qie i++e+ ++  k+
  KHJ33184.1 3393 FTFEKVNRASKACGPLVQWVQAQVEYseildrvgplrnevmfleeqaldtkaraksvegtlkklgESIAKYK-IEYAALISQIEAIKNEMSRVQFKV 3488
                  447888888888888888888888887777777777777777777777777777777666643333333334.666667777999999999998888 PP

      DHC_N1  271 ksksydvLd.vsaee..feadfkeFkerikdl 299 
                    +s+ +L+ +s+e+  +e+  k+F+++i+ l
  KHJ33184.1 3489 D-RSVRLLEsLSSERirWENSSKSFETQIATL 3519
                  8.899999977777799************976 PP

>> DHC_N2  Dynein heavy chain, N-terminal region 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   1.0      0.94   4.7e+02     205     229 ..    1093    1117 ..    1084    1143 .. 0.87
   2 !  388.3   8.1  8.7e-119  4.3e-116       1     397 []    1369    1771 ..    1369    1771 .. 0.96
   3 ?   -2.5   1.3       4.3   2.1e+03     244     293 ..    3209    3257 ..    3189    3328 .. 0.61

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.94
                  HHHHHHHHHHHHHHHHHHHHHHHHH CS
      DHC_N2  205 eewekklsrlqeildewlkvQrkWl 229 
                  +++ekk+ +++ ++++wl++Q+ W 
  KHJ33184.1 1093 TAIEKKIDEISLYVNKWLQFQSLWD 1117
                  6789********************4 PP

  == domain 2  score: 388.3 bits;  conditional E-value: 8.7e-119
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
      DHC_N2    1 leeikkelellkklwdlvsewqekleewkktpfkeldveeleeevkellkklkklpkalkewevakelkekieefkevlplieelrnpalrerHwke 97  
                  l++i +e+ +++++w+++s ++++l++  +t ++ +++++l++ +++l k  k++p +++++ +++++++ ++++++v p+i++l+++++r+rHw++
  KHJ33184.1 1369 LSSILEEVHDFRSVWSALSTIWKSLNDLRDTLWNGVQPRKLRSAIDNLIKMTKEMPSRMRQYAAFEHIQNVLRQLLKVNPIISDLKSESIRDRHWQK 1465
                  56899******************************************************************************************** PP

                  XXXXX..XXXXXXXX.XXXXXXXXXXX.X.XXXXXXXXXXXXX-HHHHHHHHHHHHHHTS---EEEE-SSS.TEEE..THHHHHHHHHHHHHHHHTC CS
      DHC_N2   98 lsellgvikdpdseesltlgdllelgl.l.eeeieeisekAtkEaslekalkkieeewkelefelteykdsgvfilkgvdeiielledhivklqsmk 192 
                  + + l+ +k+++s  s+tlgd+++ +l + e  i++i+++A++E++le+ lk+++e w+++ +el++y+++ +++++g+d++++++++++++lq+mk
  KHJ33184.1 1466 IYKSLKPGKRYSSI-SMTLGDVWDTNLvVsEAIIKDIITQAQGEMALEEFLKQVREVWTNYPLELVNYQNK-CRLIRGWDDLFAKCSENLNSLQAMK 1560
                  *****755655555.7***********646888***********************************988.************************* PP

                  SSSTT..THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT.TH.HHHHHTHHHHHHHHHHHHHHHHHHHHHHTTSGGGG...STTHHHHHHHHH CS
      DHC_N2  193 sspyvkpfeeeveewekklsrlqeildewlkvQrkWlyLepifsse.dirkqlpeeakrFksvdkewkkimkevskdpnvleatskpgllekleeln 288 
                   spy+k+fe+e+++we+kl+r++ ++d+w++vQr+W+yLe++f+++ di++ lp e++rF+++++e+  +mk+v k+p vl++ +++g++++le+l 
  KHJ33184.1 1561 HSPYCKEFEDEASSWEDKLNRVHVLFDVWIDVQRQWVYLEGVFTGNaDIKHLLPIESSRFQNINSEFFALMKKVCKQPFVLDVLNISGVQKSLERLA 1657
                  *****99**************************************66*******************************9****99************ PP

                  HHHHHHHHHHHHHHHHHHHHSTTHHHH-HHHHHHHHHTTTTSGGGHHHHHHHHSSEEEESE.....EEEEEETTS-EEEEE.......E.EEEHHHH CS
      DHC_N2  289 eqlekiqksLneyLekkRlafpRFyFlsddeLleilsqskdpsavqphlkkcFegiaslefeekkeitgmiskegEkvelse.....argnveeWLn 380 
                  e+l+kiqk+L eyLe++R +fpRFyF++d++Llei+++s+d  ++++hlkk+F g++ l ++e++ i g+ skegE+v+l++        ++ +WL 
  KHJ33184.1 1658 ELLNKIQKALGEYLERERVSFPRFYFVGDEDLLEIIGNSNDTLRISKHLKKMFAGLSGLILQEDHIISGFTSKEGEEVKLRKeisliKVPKINDWLA 1754
                  ********************************************************************************9899996444899**** PP

                  HHHHHHHHHHHHHHHHH CS
      DHC_N2  381 eleeemkktlkellkea 397 
                   le+ mk tl ell+ea
  KHJ33184.1 1755 LLESGMKLTLAELLAEA 1771
                  ************99875 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 4.3
                  THHHHHHHHHHHHHHHHHHHHHHTTSGGGG...STTHHHHHHHHHHHHHH CS
      DHC_N2  244 lpeeakrFksvdkewkkimkevskdpnvleatskpgllekleelneqlek 293 
                  l e+++  +   ++ ++++ +v++  ++  a +k++l++k ee+ne+l++
  KHJ33184.1 3209 LEEQQRHLNVGLEKLRDTVDKVRDL-RISLAEKKNELQQKNEEANEKLQR 3257
                  3333333333333333333333332.222222222233333333333333 PP

>> AAA_9  ATP-binding dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       1.4     7e+02      24      52 ..    3050    3080 ..    3040    3090 .. 0.75
   2 ?   -2.8   2.9       5.5   2.8e+03     157     184 ..    3230    3257 ..    3202    3264 .. 0.82
   3 !  245.7   0.6   5.6e-76   2.8e-73       3     220 .]    3578    3796 ..    3576    3796 .. 0.98

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.4
                  ...SSEEEEESSSTTHHHHHHH......HEE CS
       AAA_9   24 s..erwPlliDPqgqankwiknkekeklkvi 52  
                  +  +r  ll+D q++  +w  ++  ++l+++
  KHJ33184.1 3050 EgaQRQGLLLDSQEELYRWFTQQIVQNLHIV 3080
                  1459999**************9866666643 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 5.5
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       AAA_9  157 vkkerpeleekkeeliqeeaenkkqlke 184 
                  v+  r +l ekk+el q+++e +++l++
  KHJ33184.1 3230 VRDLRISLAEKKNELQQKNEEANEKLQR 3257
                  4555678899999999999999999886 PP

  == domain 3  score: 245.7 bits;  conditional E-value: 5.6e-76
                  HH.HT--STHHHHHHHHHHH..SSEEEEESSSTTHHHHHHH.......HEESTTSTTHHHHHHHHHHTTSEEEESTT.SSHHSTTHHHHTTCCEE.. CS
       AAA_9    3 WnlqgLPsDelsieNaiivtkserwPlliDPqgqankwiknk.ekeklkviklsdkkflktLenairfGkplliedvgeeldpiLepvLekeiikkg 98  
                  W+ + LP D+l++eNaii+++ +r+Pl+iDP+g+ +++i+++ + ++l+++++ d++f+k+Le+++rfG+p+li+d+ e ldp+L++vL+ke++k+g
  KHJ33184.1 3578 WHENSLPVDDLCTENAIILKRFNRYPLIIDPSGRVIEYIQKEiKGKSLTITSFLDDSFIKQLESSLRFGNPILIQDA-EYLDPVLNHVLNKEYQKTG 3673
                  *99*****************99*******************999999******************************.*****************85 PP

                  .CEEEESSSE.EE--SSCEEEEEESSTTSHHHHHHHHHSEEEE---SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       AAA_9   99 .rkliklgdkeieysenFrLylttklsnphyspeiaakvtlinFtvteeGLedqlLaevvkkerpeleekkeeliqeeaenkkqlkeledklLeeLs 194 
                   r li+lg+++i++s+ F++yl t++++  ++p++++++t++nFtvt+++L+ q L+ev+k+erp+++e++++li+ + e+k+ l++le++lL+ L+
  KHJ33184.1 3674 gRVLIQLGKQQIDFSPAFKIYLFTRDPSAIFPPDVCSRTTFVNFTVTQSSLQTQSLNEVLKSERPDIDERRSNLIKLQGEFKIYLRQLEKQLLQALN 3770
                  5************************************************************************************************ PP

                  HSSSSSSTHHHHHHHHHHHHHHHHHH CS
       AAA_9  195 eaegniLedeelietLeksKktaeei 220 
                  e++gniL+d+++ietLe+ Kk+a++i
  KHJ33184.1 3771 ESRGNILDDDKVIETLENLKKEAADI 3796
                  ***********************987 PP

>> AAA_8  P-loop containing dynein motor region D4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.3   0.0   1.3e-68   6.4e-66       2     260 .]    2923    3201 ..    2922    3201 .. 0.94

  Alignments for each domain:
  == domain 1  score: 222.3 bits;  conditional E-value: 1.3e-68
       AAA_8    2 dLvlfedaiehlarilRvlrqprghaLlvGvgGsGrqsltkLAafiaelelfqievtkkykekefredlkkllkkagikqkevvfllsdnqiieesf 98  
                  +Lvlf+d++eh++ri Rv rqp+gh++l+Gv GsG+ +l++  a +++l++fqi+++ ky+ ++f++dl+ +l++ g+k+++++f+++++++++  f
  KHJ33184.1 2923 SLVLFNDVLEHVLRIDRVFRQPQGHLILIGVSGSGKTTLSRFVAWMNGLKVFQIKIHGKYSSEDFDDDLRDVLRRSGCKGEKICFIMDESNVLDSGF 3019
                  79*********************************************************************************************** PP

       AAA_8   99 ledinnlLntGevpnLfskeekeeiieelrkeakkq.gvedskesllnffikrvrenLhivlcmspvgeafrsrlrkfpsLvncttidwfqeWPeea 194 
                  le +n+lL++ evp Lf+ +e++++++++++ a++q    ds+e+l++ f++++ +nLhiv++m+p  e + s++ + p+L n ++++wf  W ++a
  KHJ33184.1 3020 LERMNTLLANAEVPGLFEGDEFAALMTACKEGAQRQgLLLDSQEELYRWFTQQIVQNLHIVFTMNPPEEGLSSKAATSPALFNRCVLNWFGDWSDQA 3116
                  **********************************99446789******************************************************* PP

       AAA_8  195 LleVaekvl....................eeeeeieeelkesivkvlvevhssveelsekfleelkrkiyvtpksylellktykkl 260 
                  L +V+ ++                     + e +++++++e+ ++ +v++h s ++ + k+++   r +y+tp+++l+++ ++ kl
  KHJ33184.1 3117 LFQVGMELTqsvdldranyiapdsipvayQ-ELNLPASHREAFINSMVYIHLSLHRFNSKLFKYQGRITYLTPRHFLDFVAQFVKL 3201
                  *******99666666666666555554422.79999**********************************************9987 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.42   2.1e+02      12      55 ..    1923    1966 ..    1918    1977 .. 0.78
   2 !   11.9   0.0   0.00024      0.12      31      59 ..    2236    2264 ..    2216    2302 .. 0.84
   3 !  123.8   0.0   1.1e-38   5.4e-36       8     178 ..    2578    2751 ..    2573    2754 .. 0.92
   4 ?    1.6   0.0      0.34   1.7e+02      33      52 ..    2945    2964 ..    2924    3006 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.42
       AAA_7   12 ilVptvdtvrysyllelllknkkpvllvGptGtGKtviikdllk 55  
                   lV t  t r+   l++ l ++     +Gp+GtGKt  +k l  
  KHJ33184.1 1923 RLVRTPLTDRCFLTLTQALCQRLGGSPYGPAGTGKTESVKALGV 1966
                  5677777777777788888888888889********99988655 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00024
       AAA_7   31 knkkpvllvGptGtGKtviikdllkkldk 59  
                    ++ v++vG++GtGK+v  k ll++l+k
  KHJ33184.1 2236 MIHHGVMMVGDSGTGKSVSWKLLLQALQK 2264
                  45789******************999985 PP

  == domain 3  score: 123.8 bits;  conditional E-value: 1.1e-38
       AAA_7    8 kfseilVptvdtvrysyllelllknkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiiesklekrrk...gvygPp.ggk 100 
                    +++++pt dtvr + +l   l+++kp++l+Gp G+GKt+++ + l+kl+  ++ ++ +nfs+ t++  l ++++++ e r+     ++ P   g+
  KHJ33184.1 2578 TQTNVVIPTLDTVRHEDILYSWLAEHKPLILCGPPGSGKTMTLFSALRKLP--NMEVVGLNFSSATTPDLLIKTLDQYCEYRKTlngVILSPTqIGR 2672
                  56799**********************************************..9**************************99854425566654689 PP

       AAA_7  101 klvvFvDDlnmpakekygaqppiellRqlldyggwYdrkklefkeikdvqlvaamgppg.ggrneitpRllrhfnvlai 178 
                   lv+F D++n+pa++kyg+q +i +lRql+d++g++ +++ ++ ++  +q+v+a++pp   gr+ + +R+lrh+ +l +
  KHJ33184.1 2673 WLVLFCDEINLPAPDKYGTQRAISFLRQLIDQNGFWRTSDKSWVTLDRIQFVGACNPPTdAGRTALGARFLRHVPLLMV 2751
                  99******************************************************986379***********988776 PP

  == domain 4  score: 1.6 bits;  conditional E-value: 0.34
       AAA_7   33 kkpvllvGptGtGKtviikd 52  
                  + +++l+G +G+GKt++ + 
  KHJ33184.1 2945 QGHLILIGVSGSGKTTLSRF 2964
                  66899**********98654 PP

>> MT  Microtubule-binding stalk of dynein motor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.2  11.2   2.1e-41   1.1e-38       3     338 ..    3216    3547 ..    3214    3552 .. 0.90

  Alignments for each domain:
  == domain 1  score: 133.2 bits;  conditional E-value: 2.1e-41
          MT    3 lengllklqstaaqvddlkaklaaqevelkqknedadkliqvvgvetekvskekaiadeeekkvavinkevkkkqkdceedlakaepallaaqealn 99  
                  l+ gl kl+ t ++v dl+  la ++ el+qkne+a++ +q +  + +     ka + e ++ ++  ++ev++++    +dlakaepa+  a ++++
  KHJ33184.1 3216 LNVGLEKLRDTVDKVRDLRISLAEKKNELQQKNEEANEKLQRMLSDQKEAETRKATSLEIQVALEKQETEVAERREIVLNDLAKAEPAVQEAAKSVQ 3312
                  788**************************************9999999999999999999999999999**************************** PP

          MT  100 tlnktnltelksfgsppdavvnvaaavmvllaprgkvpkdrswkaakivmakvdafldslinf.dkenihenc.lkaikeylndpefepefiksksl 194 
                   ++++ ltel+s+  pp+ v     av  ll       k   wka + v+ + d f+  ++ + + e++ ++  +k  ++yl++ +f  e ++  s 
  KHJ33184.1 3313 NIKRQHLTELRSMSNPPQGVKLALDAVCTLLGH-----KVDNWKAVQAVVRR-DDFIANIVLYkNDEKMTKSLrMKMRNDYLSNDDFTFEKVNRASK 3403
                  ********************9999999999964.....4568*****99876.667777666625566666651566678***************** PP

          MT  195 aaaglcswvinivrfyevycdvepkrqalekanaelaaaqeklaaikakiaelnanlaeltaafekatadklkcqqeaeatartislanrlvgglas 291 
                  a++ l  wv   v + e+   v p r  +   +++  +++ +   +   + +l + +a+   ++    ++    ++e    +  +  + rl+  l+s
  KHJ33184.1 3404 ACGPLVQWVQAQVEYSEILDRVGPLRNEVMFLEEQALDTKARAKSVEGTLKKLGESIAKYKIEYAALISQIEAIKNEMSRVQFKVDRSVRLLESLSS 3500
                  **************************998888888778888888888899999999999998888888887788888999999999999******** PP

          MT  292 envrwaeavenfksqektlcgdvllitafvsyvgfftkkyrqelldr 338 
                  e +rw ++ + f +q  tl gdvl+ +af++y g+f +++r++++d 
  KHJ33184.1 3501 ERIRWENSSKSFETQIATLVGDVLVAAAFLAYSGLFDQQFRKNMMDE 3547
                  *********************************************96 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.1     0.004         2      63     138 .]    1994    2075 ..    1950    2075 .. 0.83
   2 !   42.8   0.0   9.4e-14   4.7e-11       1     132 [.    2240    2374 ..    2240    2380 .. 0.92
   3 !   20.2   0.0   9.5e-07   0.00047       1     128 [.    2605    2736 ..    2605    2744 .. 0.79
   4 !   22.4   0.0   1.9e-07   9.5e-05       1     137 [.    2947    3103 ..    2947    3104 .. 0.83
   5 ?    0.3   0.1       1.3   6.3e+02      65     103 ..    3288    3326 ..    3254    3349 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.004
                  --G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..-SSSEEE---.............-EEEEEESS--.-TT-TTHHHHTT- CS
       AAA_5   63 aregeilvlDEveraesevlnsLlslleerrllleeggelvkaknddller.......frviatanpldrslnelspalrsRf 138 
                  ++ g+  ++DE++r+e  +l+++ + l + +l l +g +  k + + l  r       + ++ t np + ++++l  +l+++f
  KHJ33184.1 1994 CQVGAWGCFDEFNRLEERILSAVSQQLQNIQLGLKKGIQDAKSQIELLG-RqikvdtnTGIFITLNPGYAGRSNLPDNLKKLF 2075
                  5678899**************************9999999988776443.34899*9999*********99999999999987 PP

  == domain 2  score: 42.8 bits;  conditional E-value: 9.4e-14
                  EEEEE--SSSSHHHHHHHGGGGB.....S--EEEEE--TT--HHHHH--B--.........--------............G-SEEEEESGGG--HH CS
       AAA_5    1 dvlLvGppGtgKselaerlaaal.....nreveyvqltrdtteedlkgrreikngttslvdsplvraar............egeilvlDEveraese 80  
                  +v++vG++GtgKs  ++ l++al        ++ +  ++ +++e l g ++  + t++++d+ ++   r            + +i+++++v+   +e
  KHJ33184.1 2240 GVMMVGDSGTGKSVSWKLLLQALqkvegIEGIFHIIDPKVMSKEALYGNLD--STTREWTDGLFTSILRkiidnlrgeetrRHWIIFDGDVD---PE 2331
                  599********************988766778999999*************..7**************************************...** PP

                  HHHHHHHHHHSSEEE..-SSSEEE---......-EEEEEESS--.-TT-TTH CS
       AAA_5   81 vlnsLlslleerrllleeggelvkaknddllerfrviatanpldrslnelsp 132 
                  +++ L+s+l+++++l+ ++ge+ + + +     +r++++ ++l+     ++ 
  KHJ33184.1 2332 WVENLNSVLDDNKILTLPNGERLSLPTN-----VRIMFEVETLK----YATL 2374
                  *************************998.....9****999988....4444 PP

  == domain 3  score: 20.2 bits;  conditional E-value: 9.5e-07
                  EEEEE--SSSSHHHHHHHGGGGB.S--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG--HHHHHHHHHHHHSSEE CS
       AAA_5    1 dvlLvGppGtgKselaerlaaal.nreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEveraesevlnsLlslleerrl 94  
                  +++L GppG+gK++   + ++ l n ev+  ++++ tt++ l+  ++   + ++  ++++    +  +  +l+ DE++   ++  ++   +   r+l
  KHJ33184.1 2605 PLILCGPPGSGKTMTLFSALRKLpNMEVVGLNFSSATTPDLLIKTLDQYCEYRKTLNGVILSPTQigRWLVLFCDEINLPAPDKYGTQRAISFLRQL 2701
                  589************999999999***********************767777777888888888334457778****9999988888777777777 PP

                  E..-SSSEEE---......-EEEEEESS--..-TT CS
       AAA_5   95 lleeggelvkaknddllerfrviatanpld.rsln 128 
                     +g+++++ k+   l r+++++++np+   ++ 
  KHJ33184.1 2702 IDQNGFWRTSDKSWVTLDRIQFVGACNPPTdAGRT 2736
                  7677777776666436666********99844443 PP

  == domain 4  score: 22.4 bits;  conditional E-value: 1.9e-07
                  EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG--HHHHHHHHHHHHSSEEE CS
       AAA_5    1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEveraesevlnsLlslleerrll 95  
                  +++L+G +G+gK++l++ +a + + +v+ + ++ ++++ed+   ++           +l r++   e+  +++DE + ++s  l+++++ll + +++
  KHJ33184.1 2947 HLILIGVSGSGKTTLSRFVAWMNGLKVFQIKIHGKYSSEDFDDDLR----------DVLRRSGCkgEKICFIMDESNVLDSGFLERMNTLLANAEVP 3033
                  79********************************************..........89998888333334456**********************99 PP

                  ..-SSSEEE---...................................-EEEEEESS--....-TT-TTHHHHTT CS
       AAA_5   96 leeggelvkaknddller.............................frviatanpld...rslnelspalrsR 137 
                      g +  a       +                             +++++t+np++    s++  spal  R
  KHJ33184.1 3034 GLFEGDEFAALM----TAckegaqrqgllldsqeelyrwftqqivqnLHIVFTMNPPEeglSSKAATSPALFNR 3103
                  443333333333....22334788999*******************************7766666667777666 PP

  == domain 5  score: 0.3 bits;  conditional E-value: 1.3
                  G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..-SSSEE CS
       AAA_5   65 egeilvlDEveraesevlnsLlslleerrllleeggelv 103 
                  e + +vl+++ +ae++v+++  s+ + +r +l e++   
  KHJ33184.1 3288 ERREIVLNDLAKAEPAVQEAAKSVQNIKRQHLTELRSMS 3326
                  77789*****************99999999988877655 PP

>> Dynein_heavy  Dynein heavy chain region D6 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.62   3.1e+02      15     107 ..    3607    3711 ..    3603    3720 .. 0.75
   2 !   97.3   0.0   1.2e-30   6.2e-28       2     119 .]    4035    4151 ..    4034    4151 .. 0.96

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.62
                    -THHHHHHHHHHTT--EEEEETTSHHHHHHHHHHHHHHHHT-EEEEE-GGG-CCCHH.HHHHH..................HHTT-EEEE.EEES CS
  Dynein_heavy   15 dptesleklakklkklvksvslGqgqeeeaekalekaakegsWvlLqNchlapswlk.eLekileel...........eeklhssfRlwl.tsep 96  
                    dp+ ++ ++ +k  k  ks+++ +  ++   k le++ + g+ +l+q+   +   l+  L+k  +++           + + +++f+++l t +p
    KHJ33184.1 3607 DPSGRVIEYIQKEIKG-KSLTITSFLDDSFIKQLESSLRFGNPILIQDAEYLDPVLNhVLNKEYQKTggrvliqlgkqQIDFSPAFKIYLfTRDP 3700
                    6777777777765555.7788888888888899999999999999999999987777455555444466666666755667789*****989999 PP

                    -TTS-HHHHHT CS
  Dynein_heavy   97 spkfPislLqs 107 
                    s+ fP ++  +
    KHJ33184.1 3701 SAIFPPDVCSR 3711
                    999**988665 PP

  == domain 2  score: 97.3 bits;  conditional E-value: 1.2e-30
                    TTS-EEEEE-TT--THHHHHHHHHHTT--EEEEETTSHHHH.HHHHHHHHHHHHT-EEEEE-GGG-CCCHHHHHHH.......HHTT-EEEEEEE CS
  Dynein_heavy    2 pttPvlfilspgadptesleklakklkklvksvslGqgqee.eaekalekaakegsWvlLqNchlapswlkeLekileeleeklhssfRlwltse 95  
                    +++P+l++ spg d++ ++e+l ++++++++++++G++++   a+ka+ +aa++g+Wvl++N+hlap wl++Lek ++  + k h++fRl+l++e
    KHJ33184.1 4035 ANIPILLCSSPGFDASYKIENLVSRTHTVCTNIAMGSNEGIaSADKAVASAASNGTWVLVKNVHLAPTWLQSLEKRMS--ALKPHTNFRLFLSME 4127
                    689***********************************99779*********************************97..56779********** PP

                    S-TTS-HHHHHTSEEEEE---SSH CS
  Dynein_heavy   96 pspkfPislLqssikvtnepPkgl 119 
                    +spk+Pi++L+ s  +++e+P g+
    KHJ33184.1 4128 TSPKIPINFLRASRVLMYEQPAGV 4151
                    *********************985 PP

>> AAA_lid_11  Dynein heavy chain AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.2   0.0   1.2e-28   6.2e-26       1     164 []    4152    4329 ..    4152    4329 .. 0.85

  Alignments for each domain:
  == domain 1  score: 91.2 bits;  conditional E-value: 1.2e-28
                  HHHHHHHHCT.-HHHHT..........HHHHHHHHHHHHHHHHHGGGGTT.TS-SS-----HHHHHHHHHHHHHHHHHCSS.......GGS-HHHHH CS
  AAA_lid_11    1 kanllraysn.esekideeffeekeeefkkllfsLcffHavvqeRrkFgp.lGwnipYeFnesdleisvevlkmyldeyee.......kevpwealk 88  
                  +an+++++ + +s ++++     +  e ++l+  L+f+Hav+qeR ++ p lGw+  +eFn+sd+e++  ++++++++++        +++pw+ ++
  KHJ33184.1 4152 RANMKDSMLAlSS-RSKK-----DPVERNRLYLLLSFLHAVIQERLRYAPsLGWSGFWEFNDSDYECCAFIIDTWVEKVAFsrtniapHKLPWDMIR 4242
                  6788888876433.2332.....4567899******************8758************************888778999999********* PP

                  HHHHHTTTSTT--SHHHHHHHHHHHHHHSSGGGGSTT...........-....T...E---SSHHHHHHHHCTS-SS--CCCCTS-TTH CS
  AAA_lid_11   89 yligeinYGGrvtDdwDrrllktyleeffseevleee.........yks....geykipeeksleeyleyieslpladspevfglhena 164 
                  +li e +YGG++ ++ D + l+ +++++f++ ++e+            s    +   +p+ +s +++ ++i++lp+ ++p+ +gl +na
  KHJ33184.1 4243 ILIIE-TYGGKIDNETDFNQLSRLVNSVFRSVAFEDGhnliegladK-SnpeeEALAVPTGTSFDDFYDWIQKLPEREPPTYLGLPANA 4329
                  ***98.6***************************7665555554331.1444466788999**************************98 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       8.7   4.3e+03      37      78 ..    1826    1871 ..    1810    1883 .. 0.69
   2 ?    5.6   0.0     0.036        18      11      49 ..    1950    1979 ..    1947    2026 .. 0.78
   3 !   13.2   0.0   0.00016     0.079      10      70 ..    2243    2314 ..    2239    2325 .. 0.84
   4 !   16.8   0.0   1.3e-05    0.0064       6      60 ..    2604    2650 ..    2601    2663 .. 0.90
   5 !   16.0   0.0   2.2e-05     0.011       4     104 ..    2944    3045 ..    2941    3087 .. 0.59
   6 ?   -2.0   0.2       8.1     4e+03     100     121 ..    3311    3330 ..    3202    3336 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 8.7
      AAA_22   37 e...erpevv.fvtlpsstsskdllrellralglelkaerlsseel 78  
                  e   ++++v+ +  ++++++ + ++r+++++l  e+ ++r+  e l
  KHJ33184.1 1826 ElynQEVKVLkLLAATVLGDITLIRRKVCEQLITECVHQRDVIEKL 1871
                  1455677777788889999*************99999855555555 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.036
      AAA_22   11 tGesGtGKTtllrrlleqldeeakaeeerpevvfvtlps 49  
                  +G++GtGKT +++ l  ql         ++ ++ +++  
  KHJ33184.1 1950 YGPAGTGKTESVKALGVQL---------GRFTLVFCCDD 1979
                  6**************9999.........66666666655 PP

  == domain 3  score: 13.2 bits;  conditional E-value: 0.00016
      AAA_22   10 vtGesGtGKTtllrrlleqldeeakaee.........erpevvfvtlpsst.sskdl.lrellralglelka 70  
                   +G sGtGK+++ + ll+ l++++ +e          +++e ++ +l s t +++d  ++ +lr++ ++l +
  KHJ33184.1 2243 MVGDSGTGKSVSWKLLLQALQKVEGIEGifhiidpkvMSKEALYGNLDSTTrEWTDGlFTSILRKIIDNLRG 2314
                  68*********************9999999999999999999999999999977764488888888776666 PP

  == domain 4  score: 16.8 bits;  conditional E-value: 1.3e-05
      AAA_22    6 gilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrel 60  
                  + l+++G++G+GKT++l   l++l+        + evv  + +s t+++ l + l
  KHJ33184.1 2604 KPLILCGPPGSGKTMTLFSALRKLP--------NMEVVGLNFSSATTPDLLIKTL 2650
                  5689********************8........9************999998776 PP

  == domain 5  score: 16.0 bits;  conditional E-value: 2.2e-05
      AAA_22    4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka.........erlsseell.ealeqalrara 90  
                   +g+l+++G sG+GKTtl r ++  +         + +v+ +++ ++ ss+d+  +l   l +++ +         e + ++  + e+++  l ++ 
  KHJ33184.1 2944 PQGHLILIGVSGSGKTTLSRFVAWMN---------GLKVFQIKIHGKYSSEDFDDDLRDVLRRSGCKgekicfimdESNVLDSGFlERMNTLLANAE 3031
                  79*****************9999888.........66666666666665555544444444444444344777777333333333366666666555 PP

      AAA_22   91 vielliiDEaqhlr 104 
                  v++l+  DE+  l+
  KHJ33184.1 3032 VPGLFEGDEFAALM 3045
                  55555555555554 PP

  == domain 6  score: -2.0 bits;  conditional E-value: 8.1
      AAA_22  100 aqhlrseealeeLrsllnlsrk 121 
                  +q++ + ++l+eLrs++n   +
  KHJ33184.1 3311 VQNI-KRQHLTELRSMSN-PPQ 3330
                  3455.6888888888888.444 PP

>> Dynein_AAA_lid  Dynein heavy chain AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   0.0   2.9e-16   1.5e-13       6     128 ..    2443    2564 ..    2439    2565 .. 0.95

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 2.9e-16
  Dynein_AAA_lid    6 eklvepclefvrkkckeivpvtdlnlvqslcrllealldefeekeeesadeeleeeeleevleklflfalvWSiGatldedsrekfdeflrel 98  
                      +++++ +l+ + k+ ++i+++t  +++ +l++ll+++++++ e++++++d +l+++++e+++ k +l al+WS+ + +   + +   ++l  l
      KHJ33184.1 2443 DNFITIALDHA-KNYSHIMKFTIARVLSTLFSLLNKVIRNIIEYNNQNVDFPLDPDQIESYVAKKLLLALIWSLTGDCPRVDSKAYGDYLSGL 2534
                      57888889999.********************************************************************************* PP

  Dynein_AAA_lid   99 leealklppeegtvyDyffdketgkWkpWe 128 
                      ++  +++ +++ ++ Dy +     +W pW+
      KHJ33184.1 2535 ITFGSPIIEDDSSIIDYDVTLPMAEWSPWQ 2564
                      99555555*********************8 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0     0.013       6.3       4      31 ..    1950    1977 ..    1949    2027 .. 0.85
   2 ?    2.3   0.0      0.41   2.1e+02       1      35 [.    2241    2280 ..    2241    2327 .. 0.69
   3 !   18.5   0.0   4.2e-06    0.0021       1     126 [.    2606    2744 ..    2606    2748 .. 0.65
   4 !   16.1   0.0   2.3e-05     0.012       1      67 [.    2948    3012 ..    2948    3032 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.013
                  ESSTTSSHHHHHHHHHHHHTHEEEEEET CS
         AAA    4 yGppGtGKTllakavakelgvefleisg 31  
                  yGp GtGKT  +ka+  +lg+  l + +
  KHJ33184.1 1950 YGPAGTGKTESVKALGVQLGRFTLVFCC 1977
                  9**************9999866555544 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.41
                  EEEESSTTSSHHHHHHHHHHHHT.HE....EEEEETTTCS CS
         AAA    1 vllyGppGtGKTllakavakelg.ve....fleisgsell 35  
                  v+++G  GtGK+   k + + l+ ve    ++ i  ++++
  KHJ33184.1 2241 VMMVGDSGTGKSVSWKLLLQALQkVEgiegIFHIIDPKVM 2280
                  6899****************98533222234444444444 PP

  == domain 3  score: 18.5 bits;  conditional E-value: 4.2e-06
                  EEEESSTTSSHHHHHHHHHHHH.THEEEEEETTTCSSS........STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHH CS
         AAA    1 vllyGppGtGKTllakavakel.gvefleisgsellsk........yvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnq 88  
                  ++l+GppG GKT++  +  ++l ++e++ ++ s+ +             e  k +++++ +  +  +  +lf DEi   a+++       ++r+++ 
  KHJ33184.1 2606 LILCGPPGSGKTMTLFSALRKLpNMEVVGLNFSSATTPdlliktldQYCEYRKTLNGVILSPTQIGRWLVLFCDEINLPAPDK-----YGTQRAISF 2697
                  589************99999986566666666666622344445665556666666666554444445***********9999.....445555665 PP

                  HHHHHHHTTTS.........SSTEEEEEEESS.GGGSTHHHHSTTSSE CS
         AAA   89 Llteldgvkkk.........eskvivigatnr.pdkldpallrgRfdr 126 
                  L + +d+              +++ ++ga+n   d    al   Rf r
  KHJ33184.1 2698 LRQLIDQNGFWrtsdkswvtLDRIQFVGACNPpTDAGRTALG-ARFLR 2744
                  555555433224556788887779999999984444445555.56665 PP

  == domain 4  score: 16.1 bits;  conditional E-value: 2.3e-05
                  EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETG CS
         AAA    1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEi 67  
                  ++l+G  G GKT+l + va   g ++++i+ +       ++  +++r+++++   k ++ ++++DE 
  KHJ33184.1 2948 LILIGVSGSGKTTLSRFVAWMNGLKVFQIKIHGKY--SSEDFDDDLRDVLRRSGCKGEKICFIMDES 3012
                  589*****************************999..6689999******99655555699999994 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0       2.4   1.2e+03       6      25 ..    1951    1971 ..    1950    1984 .. 0.84
   2 !    9.7   0.0    0.0018      0.92       2      54 ..    2241    2302 ..    2241    2328 .. 0.72
   3 !   10.7   0.0   0.00086      0.43       3      29 ..    2607    2634 ..    2606    2666 .. 0.86
   4 !   10.6   0.1   0.00097      0.48       3      20 ..    2949    2966 ..    2948    2977 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 2.4
      AAA_33    6 GlpGsGKstlaerllkklg.a 25  
                  G++G+GK+  ++ l  +lg +
  KHJ33184.1 1951 GPAGTGKTESVKALGVQLGrF 1971
                  9********999998888853 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0018
      AAA_33    2 vllvGlpGsGKstlaerllkklg........avllssdtlrr.rlfgtdqqsktdytrvldr 54  
                  v++vG +G+GKs   + ll++l+        + +++  ++++ +l+g+ + +++++t+ l+ 
  KHJ33184.1 2241 VMMVGDSGTGKSVSWKLLLQALQkvegiegiFHIIDPKVMSKeALYGNLDSTTREWTDGLFT 2302
                  89********************9999999955556666666689999888888877774433 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 0.00086
      AAA_33    3 llvGlpGsGKstlaerllkklg.avlls 29  
                  +l+G+pGsGK+  + + l+kl+ ++++ 
  KHJ33184.1 2607 ILCGPPGSGKTMTLFSALRKLPnMEVVG 2634
                  89*******************9988876 PP

  == domain 4  score: 10.6 bits;  conditional E-value: 0.00097
      AAA_33    3 llvGlpGsGKstlaerll 20  
                  +l+G++GsGK+tl++ ++
  KHJ33184.1 2949 ILIGVSGSGKTTLSRFVA 2966
                  89************9886 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.083        41      13      62 ..    1938    1979 ..    1935    2088 .. 0.61
   2 !    7.9   0.0    0.0074       3.7      26      89 ..    2240    2312 ..    2227    2453 .. 0.79
   3 ?    5.3   0.0     0.048        24      26      52 ..    2605    2631 ..    2591    2743 .. 0.69
   4 !    8.9   0.0    0.0036       1.8      18      42 ..    2939    2963 ..    2929    2967 .. 0.77
   5 ?    1.3   0.0      0.81     4e+02     116     164 ..    2984    3032 ..    2969    3036 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.083
      AAA_16   13 lsalervrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdq 62  
                  ++al++   g+p     +G++G+GK+  v++l  +l +     l   cd+
  KHJ33184.1 1938 TQALCQRLGGSP-----YGPAGTGKTESVKALGVQLGRFT---LVFCCDD 1979
                  566666666666.....9***********99987777653...3333333 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0074
      AAA_16   26 lvllsGesGvGKsslvrellralekd..............ggif...lrgkcdqlesaipysalaqalareellrqlldea 89  
                   v+ +G+sG+GKs   + ll+al+k                      l+g+ d+ +++     +++ l++ ++lr++ d++
  KHJ33184.1 2240 GVMMVGDSGTGKSVSWKLLLQALQKVegiegifhiidpkvM--SkeaLYGNLDSTTRE-----WTDGLFT-SILRKIIDNL 2312
                  68889***************877776888544444443220..133355555555333.....7888855.7777777763 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.048
      AAA_16   26 lvllsGesGvGKsslvrellralekdg 52  
                   ++l G++G+GK+  + ++lr l   +
  KHJ33184.1 2605 PLILCGPPGSGKTMTLFSALRKLPNME 2631
                  57899*********9977777776653 PP

  == domain 4  score: 8.9 bits;  conditional E-value: 0.0036
      AAA_16   18 rvrsgrpelvllsGesGvGKsslvr 42  
                  rv ++  + ++l+G sG+GK++l r
  KHJ33184.1 2939 RVFRQPQGHLILIGVSGSGKTTLSR 2963
                  666655599*************976 PP

  == domain 5  score: 1.3 bits;  conditional E-value: 0.81
      AAA_16  116 asrllellkrllallsrderplvlvlDdlqwadeaslqllaaLlrlles 164 
                  ++++ + l++ l+++ ++++++ +++D+   +d++ l+ + +Ll+++e 
  KHJ33184.1 2984 SEDFDDDLRDVLRRSGCKGEKICFIMDESNVLDSGFLERMNTLLANAEV 3032
                  4899*************9999**************99999999988775 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0      0.37   1.8e+02       5      67 ..    1951    2023 ..    1950    2040 .. 0.62
   2 ?    0.5   0.0       1.7   8.4e+02       2      81 ..    2242    2326 ..    2241    2354 .. 0.70
   3 !    9.4   0.0    0.0029       1.4       2      44 ..    2607    2653 ..    2606    2664 .. 0.77
   4 !   15.7   0.0   3.3e-05     0.016       2      62 ..    2949    3025 ..    2948    3064 .. 0.74

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.37
      AAA_18    5 GtpGvGKttlakeLskrl.gf..........gvnlrdvakenglllevdpe........aldeskrldedkldklldaleen 67  
                  G++G+GKt+  k+L   l  f           ++++  ++                    +de++rl+e  l +++++l+++
  KHJ33184.1 1951 GPAGTGKTESVKALGVQLgRFtlvfccddtfDFQSMGRIFL---------GicqvgawgCFDEFNRLEERILSAVSQQLQNI 2023
                  9*************777734466555554432222222222.........12222334456777777777777777777765 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 1.7
      AAA_18    2 lltGtpGvGKttlakeLskrl.gf.......gvnlrdvakenglllevdpealdeskrldedkldklldaleenssaleegknlvidg 81  
                  +  G +G+GK+   k L + l ++       +++  +v +++ l+   d    + ++ l +  l k++d+l++    ++  +++++dg
  KHJ33184.1 2242 MMVGDSGTGKSVSWKLLLQALqKVegiegifHIIDPKVMSKEALYGNLDSTTREWTDGLFTSILRKIIDNLRGE---ETRRHWIIFDG 2326
                  66899******999999665545566688887777777777777777777744445666677777777777775...35556656655 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.0029
      AAA_18    2 lltGtpGvGKt.tlakeLskrlgf...gvnlrdvakenglllevdpe 44  
                  +l+G+pG+GKt tl  +L+k+ ++   g n ++  + + l  + d++
  KHJ33184.1 2607 ILCGPPGSGKTmTLFSALRKLPNMevvGLNFSSATTPDLLIKTLDQY 2653
                  79********9688888877658899988888877777776666666 PP

  == domain 4  score: 15.7 bits;  conditional E-value: 3.3e-05
      AAA_18    2 lltGtpGvGKttlakeLskrlgf................gvnlrdvakenglllevdpealdeskrldedkldklld 62  
                  +l G++G+GKttl++ ++ ++g+                 + lrdv++ +g+  e   +  des++ld ++l++  +
  KHJ33184.1 2949 ILIGVSGSGKTTLSRFVAWMNGLkvfqikihgkyssedfDDDLRDVLRRSGCKGEKICFIMDESNVLDSGFLERMNT 3025
                  799**************999955666666666666666666666666666666666666666666666666555544 PP

>> AAA_lid_1  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   2.2e-07   0.00011      16      94 ..    2799    2877 ..    2784    2882 .. 0.80
   2 ?    6.0   0.0     0.027        13      47      92 ..    4234    4277 ..    4220    4283 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 2.2e-07
   AAA_lid_1   16 flptaikfhyvfnlrdlsnifqgllfssaevlkapl.dlirlylheservygdkmveekdlellekvtlevakkffddve 94  
                  f p  i+ hy++  r+l+   +g+  s   +   ++  lir++ he+ r+++d++v e++ +  +     +   ff  ++
  KHJ33184.1 2799 FTP-KIQPHYIYSPRELTRWVRGIYESIRPLETLTIeSLIRIWAHEALRLFQDRLVSENERQWTNEAVHRISNEFFPSID 2877
                  555.5899***************988776665556526********************9998888777777777877766 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.027
   AAA_lid_1   47 lkapldlirlylheservygdkmveekdlellekvtlevakk.ffdd 92  
                   k p+d+ir+ + e+   yg k+ +e d+++l ++   v +   f+d
  KHJ33184.1 4234 HKLPWDMIRILIIET---YGGKIDNETDFNQLSRLVNSVFRSvAFED 4277
                  488*********997...****************9877665414666 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.21   1.1e+02     108     156 ..    2218    2265 ..    2211    2294 .. 0.74
   2 !   13.2   0.0   7.1e-05     0.035     109     156 ..    2583    2630 ..    2565    2634 .. 0.83
   3 ?    5.3   0.0     0.017       8.6     117     146 ..    2936    2962 ..    2910    2972 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.21
       T2SSE  108 lgaeealkekiaevlrkavrerglilvsGgTgsGKttllyallkeinks 156 
                  l+++e+   ki ++ +  + ++g+++  G  g+GK+++   ll+ ++k 
  KHJ33184.1 2218 LVVNETWMLKILQLYQIQMIHHGVMM-VGDSGTGKSVSWKLLLQALQKV 2265
                  55556666666666666655666555.59**********9999999987 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 7.1e-05
       T2SSE  109 gaeealkekiaevlrkavrerglilvsGgTgsGKttllyallkeinks 156 
                  ++   ++ + +++l + ++e++ +++ G+ gsGKt +l ++l ++++ 
  KHJ33184.1 2583 VIPTLDTVRHEDILYSWLAEHKPLILCGPPGSGKTMTLFSALRKLPNM 2630
                  555556667889999999************************999876 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.017
       T2SSE  117 kiaevlrkavrerglilvsGgTgsGKttll 146 
                  +i++v r++   +g +++ G  gsGKttl 
  KHJ33184.1 2936 RIDRVFRQP---QGHLILIGVSGSGKTTLS 2962
                  578999999...****************85 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.049        24      22      48 ..    2238    2264 ..    2232    2276 .. 0.83
   2 !    8.7   0.0    0.0021         1      24      48 ..    2605    2629 ..    2597    2636 .. 0.76
   3 ?    2.9   0.0      0.13        62      24      41 ..    2947    2964 ..    2939    2971 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.049
  Mg_chelatase   22 gHnlllvGppGsGKtmlakrlpsllpp 48  
                    +H +++vG +G+GK++  k l + l +
    KHJ33184.1 2238 HHGVMMVGDSGTGKSVSWKLLLQALQK 2264
                    599************988877666655 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0021
  Mg_chelatase   24 nlllvGppGsGKtmlakrlpsllpp 48  
                     l+l+GppGsGKtm        lp+
    KHJ33184.1 2605 PLILCGPPGSGKTMTLFSALRKLPN 2629
                    599***********76555555555 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.13
  Mg_chelatase   24 nlllvGppGsGKtmlakr 41  
                    +l+l+G +GsGKt l + 
    KHJ33184.1 2947 HLILIGVSGSGKTTLSRF 2964
                    89************9875 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1       1.6   7.8e+02      53      71 ..    1950    1968 ..    1935    1973 .. 0.92
   2 ?    0.7   0.0      0.78   3.9e+02      47      61 ..    2238    2252 ..    2209    2266 .. 0.80
   3 !   10.3   0.0   0.00083      0.41      41      62 ..    2597    2618 ..    2585    2677 .. 0.91
   4 ?    0.2   0.0       1.1   5.5e+02      48      64 ..    2946    2962 ..    2932    2979 .. 0.82
   5 ?    1.1   0.0      0.58   2.9e+02      81     128 ..    3357    3404 ..    3340    3422 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.6
   IstB_IS21   53 lGpsGvGKshlaialgvea 71  
                   Gp+G+GK+    algv+ 
  KHJ33184.1 1950 YGPAGTGKTESVKALGVQL 1968
                  59*************9985 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.78
   IstB_IS21   47 kenivllGpsGvGKs 61  
                  +++++++G sG+GKs
  KHJ33184.1 2238 HHGVMMVGDSGTGKS 2252
                  7899**********8 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.00083
   IstB_IS21   41 lsfiekkenivllGpsGvGKsh 62  
                   s++++++ ++l+Gp+G GK+ 
  KHJ33184.1 2597 YSWLAEHKPLILCGPPGSGKTM 2618
                  58******************95 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 1.1
   IstB_IS21   48 enivllGpsGvGKshla 64  
                    ++l+G sG GK+ l+
  KHJ33184.1 2946 GHLILIGVSGSGKTTLS 2962
                  5689**********997 PP

  == domain 5  score: 1.1 bits;  conditional E-value: 0.58
   IstB_IS21   81 vrvedLveelkrarrdgklaralkrllkvdllilDdlgllpldqaeae 128 
                  vr +d+++++ + ++d+k+++ l+  ++ d l  Dd+ ++++++a+++
  KHJ33184.1 3357 VRRDDFIANIVLYKNDEKMTKSLRMKMRNDYLSNDDFTFEKVNRASKA 3404
                  67789999**********************************998765 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.2     0.095        47      25      38 ..    1951    1964 ..    1941    1969 .. 0.90
   2 ?    1.6   0.0      0.39   1.9e+02      21      45 ..    2241    2265 ..    2215    2278 .. 0.86
   3 ?    4.6   0.0     0.048        24      21      40 ..    2606    2626 ..    2596    2650 .. 0.71
   4 ?    3.0   0.0      0.15        73      13      36 ..    2940    2963 ..    2936    2972 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.095
      AAA_30   25 GpAGtGKttalkal 38  
                  GpAGtGKt ++kal
  KHJ33184.1 1951 GPAGTGKTESVKAL 1964
                  9*********9987 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.39
      AAA_30   21 avltGpAGtGKttalkalreaweaa 45  
                  ++++G  GtGK+ + k l +a+++ 
  KHJ33184.1 2241 VMMVGDSGTGKSVSWKLLLQALQKV 2265
                  5789**********99998888765 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.048
      AAA_30   21 avltGpAGtGKttalkal.re 40  
                   +l Gp+G+GKt++l ++ r+
  KHJ33184.1 2606 LILCGPPGSGKTMTLFSAlRK 2626
                  6899********988654144 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.15
      AAA_30   13 lltsgdrvavltGpAGtGKttalk 36  
                  +  +++   +l G+ G+GKtt+ +
  KHJ33184.1 2940 VFRQPQGHLILIGVSGSGKTTLSR 2963
                  6667777899***********876 PP

>> Taxilin  Myosin-like coiled-coil protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5  18.8   1.8e-06   0.00088      91     298 ..    3199    3519 ..    3193    3521 .. 0.89

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 1.8e-06
     Taxilin   91 kqrareeeekrkelaekfqakLkdiqaqieekserneklreenaelteKlkslieqye..lreehfekllktkelelqlaeaKlqqadallkeeqek 185 
                  +++ +e+ e  +e + +++  L+++++++++ ++ + +l+e+++el++K ++  e+ +  l +++  ++ k+  le+q+a +K          e+e 
  KHJ33184.1 3199 VKLYEEKREDLEEQQRHLNVGLEKLRDTVDKVRDLRISLAEKKNELQQKNEEANEKLQrmLSDQKEAETRKATSLEIQVALEKQ---------ETEV 3286
                  667777888888889999************************************988766899999*****************9.........3333 PP

     Taxilin  186 kkrekeyllkeakeltkkvkalketekelkeqlnl.............................................................. 220 
                   +r +e +l+++ + +  v+++ +  ++ k q                                                                 
  KHJ33184.1 3287 AER-REIVLNDLAKAEPAVQEAAKSVQNIKRQHLTelrsmsnppqgvklaldavctllghkvdnwkavqavvrrddfianivlykndekmtkslrmk 3382
                  322.333355555555555555555555544433336666666****************************************************** PP

     Taxilin  221 ...........................................................YaeKfeefqdtLakSnelFatFkkEmekmtkktkklEk 258 
                                                                              +++ + +++tL+k  e +a++k E   + ++++ ++ 
  KHJ33184.1 3383 mrndylsnddftfekvnraskacgplvqwvqaqveyseildrvgplrnevmfleeqaldTKARAKSVEGTLKKLGESIAKYKIEYAALISQIEAIKN 3479
                  **********************************************************999************************************ PP

     Taxilin  259 etnlwkskfektnkallemaeertekkkeieklkkkiqkL 298 
                  e ++++ k + + + l ++  er ++++  ++++ +i +L
  KHJ33184.1 3480 EMSRVQFKVDRSVRLLESLSSERIRWENSSKSFETQIATL 3519
                  *************************************988 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.054        27      19      37 ..    2236    2253 ..    2226    2264 .. 0.82
   2 ?    0.9   0.0      0.75   3.7e+02      25      41 ..    2606    2623 ..    2599    2632 .. 0.79
   3 !    8.0   0.0    0.0046       2.3      20      38 ..    2943    2961 ..    2933    2962 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.054
      AAA_29   19 idlkgatlltGpsGsGKST 37  
                  +  +g ++++G+sG+GKS 
  KHJ33184.1 2236 MIHHG-VMMVGDSGTGKSV 2253
                  44467.99*********95 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.75
      AAA_29   25 tlltGpsGsGKS.TllDA 41  
                   +l Gp GsGK+ Tl+ A
  KHJ33184.1 2606 LILCGPPGSGKTmTLFSA 2623
                  5799*******8566655 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0046
      AAA_29   20 dlkgatlltGpsGsGKSTl 38  
                  +++g  +l+G sGsGK+Tl
  KHJ33184.1 2943 QPQGHLILIGVSGSGKTTL 2961
                  4578899***********8 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0     0.014       7.1      14      40 ..    2241    2267 ..    2237    2309 .. 0.87
   2 ?    1.7   0.0      0.68   3.4e+02      13      34 ..    2605    2627 ..    2599    2644 .. 0.80
   3 !    8.7   0.0    0.0048       2.4      13      67 ..    2947    3004 ..    2942    3079 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.014
                  EEEEESTTSSHHHHHHHHTTSS--SEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   14 vaivGenGaGKStLlkllagllkpteG 40  
                  v +vG++G+GKS   kll++ l++ eG
  KHJ33184.1 2241 VMMVGDSGTGKSVSWKLLLQALQKVEG 2267
                  789*****************9999777 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.68
                  EEEEEESTTSSHH.HHHHHHTTS CS
                  xxxxxxxxxxxxx.xxxxxxxxx RF
    ABC_tran   13 kvaivGenGaGKS.tLlkllagl 34  
                   + + G+ G+GK+ tL+++l +l
  KHJ33184.1 2605 PLILCGPPGSGKTmTLFSALRKL 2627
                  57899********6677777665 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.0048
                  EEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGG...B-HHHCCHCEEEE-SS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxx RF
    ABC_tran   13 kvaivGenGaGKStLlkllagllkpteGeilldgkdlke...qeleslrkeigvlpqe 67  
                   + ++G +G+GK+tL + +a +   +  +i++ gk ++e   ++l+ + +++g+  ++
  KHJ33184.1 2947 HLILIGVSGSGKTTLSRFVAWMNGLKVFQIKIHGKYSSEdfdDDLRDVLRRSGCKGEK 3004
                  5789************999988888888888887777766766666666666666666 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   0.00026      0.13      23      54 ..    2593    2624 ..    2584    2704 .. 0.84
   2 ?    2.2   0.0      0.23   1.1e+02      34      93 ..    2946    2998 ..    2934    3060 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00026
      AAA_25   23 rwlvkgllpagelallaGapgtGKttlaldla 54  
                  ++++  +l++++  +l+G+pg+GKt+ + +  
  KHJ33184.1 2593 EDILYSWLAEHKPLILCGPPGSGKTMTLFSAL 2624
                  678999********************988765 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.23
      AAA_25   34 elallaGapgtGKttlaldlalavatGkpwlg.pvapeqgkVlyvsaEdsedelrrRlrav 93  
                  +  +l+G +g+GKttl  +  +a++ G +++  +    +gk      Ed  d+lr  lr+ 
  KHJ33184.1 2946 GHLILIGVSGSGKTTL--SRFVAWMNGLKVFQiK---IHGKYSS---EDFDDDLRDVLRRS 2998
                  56799*********96..5677788888888832...3444333...44444444444443 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.2         4     2e+03      17      29 ..    1951    1963 ..    1950    1970 .. 0.85
   2 ?   -0.5   0.0       2.8   1.4e+03     105     138 ..    2217    2247 ..    2198    2270 .. 0.67
   3 !   11.5   0.0   0.00058      0.29       8      39 ..    2601    2632 ..    2594    2644 .. 0.83
   4 ?    2.9   0.0      0.26   1.3e+02       9      32 ..    2944    2966 ..    2938    2978 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 4
      AAA_19   17 aGpGtGKTrvlkh 29  
                  +++GtGKT+ +k+
  KHJ33184.1 1951 GPAGTGKTESVKA 1963
                  899*****99876 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 2.8
      AAA_19  105 llivDEfqdvdelqyrLlkallgekkklllvGDp 138 
                   l+v E+ +++ lq   ++ +    + +++vGD 
  KHJ33184.1 2217 NLVVNETWMLKILQLYQIQMIH---HGVMMVGDS 2247
                  5666666666666655555555...446666664 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 0.00058
      AAA_19    8 lkekvllvtaGpGtGKTrvlkhivallvelgg 39  
                  +++k+l++ ++pG+GKT +l  +++ l +++ 
  KHJ33184.1 2601 AEHKPLILCGPPGSGKTMTLFSALRKLPNMEV 2632
                  6789****************999988877665 PP

  == domain 4  score: 2.9 bits;  conditional E-value: 0.26
      AAA_19    9 kekvllvtaGpGtGKTrvlkhiva 32  
                  ++++l++++  G+GKT++    va
  KHJ33184.1 2944 PQGHLILIGVSGSGKTTL-SRFVA 2966
                  68899**********975.44455 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0       0.1        50       8      33 ..    1950    1979 ..    1949    2014 .. 0.83
   2 ?   -1.3   0.0         3   1.5e+03       5      21 ..    2241    2257 ..    2240    2266 .. 0.83
   3 ?    4.7   0.0     0.044        22       5      36 ..    2606    2640 ..    2603    2681 .. 0.80
   4 ?    2.7   0.0      0.18        90       5      19 ..    2948    2962 ..    2946    2988 .. 0.91

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.1
      AAA_24    8 yGpsgiGKTtlakel....gpkplfidtek 33  
                  yGp+g+GKT ++k l    g  +l++ +++
  KHJ33184.1 1950 YGPAGTGKTESVKALgvqlGRFTLVFCCDD 1979
                  9************99888777777776665 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 3
      AAA_24    5 iliyGpsgiGKTtlake 21  
                  ++++G+sg+GK+ + k 
  KHJ33184.1 2241 VMMVGDSGTGKSVSWKL 2257
                  6889********87665 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.044
      AAA_24    5 iliyGpsgiGKTtlakel...gpkplfidtekGlk 36  
                  +++ Gp+g+GKT+++ ++    p+  ++ ++ +++
  KHJ33184.1 2606 LILCGPPGSGKTMTLFSAlrkLPNMEVVGLNFSSA 2640
                  5799**********999977777777777766665 PP

  == domain 4  score: 2.7 bits;  conditional E-value: 0.18
      AAA_24    5 iliyGpsgiGKTtla 19  
                  ++++G sg+GKTtl 
  KHJ33184.1 2948 LILIGVSGSGKTTLS 2962
                  579**********96 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0      0.65   3.2e+02       4      23 ..    1950    1969 ..    1949    1992 .. 0.89
   2 ?    5.1   0.0      0.06        30       1      25 [.    2241    2265 ..    2241    2299 .. 0.82
   3 ?    2.0   0.0      0.54   2.7e+02       2      17 ..    2607    2622 ..    2606    2639 .. 0.83
   4 ?    1.1   0.0         1     5e+02       2      62 ..    2949    3015 ..    2948    3034 .. 0.54

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.65
  RNA_helicase    4 yGpsgeGKStlakeLakall 23  
                    yGp+g+GK+  +k L  +l 
    KHJ33184.1 1950 YGPAGTGKTESVKALGVQLG 1969
                    8***********99987765 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.06
  RNA_helicase    1 iwlyGpsgeGKStlakeLakallkk 25  
                    ++++G+sg+GKS+  k L +al+k 
    KHJ33184.1 2241 VMMVGDSGTGKSVSWKLLLQALQKV 2265
                    6899***************999964 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.54
  RNA_helicase    2 wlyGpsgeGKStlake 17  
                    +l+Gp+g GK+++  +
    KHJ33184.1 2607 ILCGPPGSGKTMTLFS 2622
                    79*********98766 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 1
  RNA_helicase    2 wlyGpsgeGKStlakeLakall.kklklkkkdsvysrnpeddfw.....dgYtgqevvvidDfgqvk 62  
                    +l G sg GK+tl++ +a     k ++ k ++++ s   +dd       +g++g++++ i D ++v 
    KHJ33184.1 2949 ILIGVSGSGKTTLSRFVAWMNGlKVFQIKIHGKYSSEDFDDDLRdvlrrSGCKGEKICFIMDESNVL 3015
                    68999********998553333133333333333334444443211123466666666666655555 PP

>> COG2  COG (conserved oligomeric Golgi) complex component, COG2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   0.00046      0.23      47     129 ..    1369    1453 ..    1365    1456 .. 0.91
   2 ?    4.7   2.6     0.059        30      62     102 ..    3221    3261 ..    3146    3290 .. 0.56
   3 ?    2.6   0.3      0.26   1.3e+02      60     114 ..    3449    3507 ..    3447    3522 .. 0.83
   4 ?   -0.7   0.2       2.7   1.4e+03      25      52 ..    3744    3771 ..    3740    3813 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00046
        COG2   47 lelvnedyadFvslSghLvglqeeleevesplaaar..kkvesvreklsereeeveskleeakeleekrellklllkldevvekl 129 
                  l+++ e+++dF s+ ++L  + ++l+ ++  l + +  +k++s++++l ++ +e+ s++++ ++ e  +++l+ llk++  ++ l
  KHJ33184.1 1369 LSSILEEVHDFRSVWSALSTIWKSLNDLRDTLWNGVqpRKLRSAIDNLIKMTKEMPSRMRQYAAFEHIQNVLRQLLKVNPIISDL 1453
                  567889*************************987663379*************************************99887766 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.059
        COG2   62 ghLvglqeeleevesplaaarkkvesvreklsereeevesk 102 
                  ++L++  ++++ ++ +la+ ++++++ +e+ +e+ +++ s 
  KHJ33184.1 3221 EKLRDTVDKVRDLRISLAEKKNELQQKNEEANEKLQRMLSD 3261
                  23444444444444444444444444444444444443333 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.26
        COG2   60 lSghLvglqeeleevesplaaarkkvesvreklsereeeveskleeakeleekr....e 114 
                  + g L+ l e++ + + + aa+ +++e++++++s+ + +v+  ++  ++l ++r    +
  KHJ33184.1 3449 VEGTLKKLGESIAKYKIEYAALISQIEAIKNEMSRVQFKVDRSVRLLESLSSERirweN 3507
                  567899999999999*****************************999999998865543 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 2.7
        COG2   25 gvpLeslrrdLeaylkllekellelvne 52  
                  + +L +l+ + + yl +lek+ll+  ne
  KHJ33184.1 3744 RSNLIKLQGEFKIYLRQLEKQLLQALNE 3771
                  5678899999999999999999999997 PP

>> TraF_2  F plasmid transfer operon, TraF, protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00018     0.088      33     192 ..     903    1074 ..     877    1086 .. 0.78
   2 ?   -0.4   0.8       1.2   5.8e+02      39      84 ..    3219    3268 ..    3211    3289 .. 0.61

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00018
      TraF_2   33 vdnlvDkiDdlsdildgleaavnaasadetqvdeaaddlnalLedlggdgylkasagvglavaipndrlggalflkayleaiaradvl......... 120 
                  v   +D++ +++ ++ +  a  ++ s+d++++++++d ++ + ++l+ ++y++    +g +v   n+r++ al+++ + ++++ ++v+         
  KHJ33184.1  903 V--KTDTLASINITIQKSLAELETCSYDSVSFKQRLDCIQMAVDQLSLENYVN----LGYSVREMNSRIKKALLARLRKSISVWTNVFekkplegpn 993 
                  4..3455555555555555566666777777****************999766....89999**************************999999887 PP

      TraF_2  121 eesdiqslsdlq........eddlnssvyvk.aaavtelglayakevslggqqlsvGvtpklqrldlykyvvsvndfddsd 192 
                  ++s    ls+           ++l   ++++ ++++++ +l++a++ +++  +  +Gv  +l +++ ++y+++++d++d +
  KHJ33184.1  994 DDSRRRNLSNSSslsskaptLKRLVHEISMRnQVIYLDPPLNFARASWFSQLHEWIGVVCNLRKIKASRYQITLSDTNDIE 1074
                  333333333333666677899999999999835889***************************************999654 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.2
      TraF_2   39 kiDdlsdildgleaavnaasad....etq.vdeaaddlnalLedlggdgyl 84  
                   +++l d++d++++   +++++    + q  +ea ++l++ L+d ++ ++ 
  KHJ33184.1 3219 GLEKLRDTVDKVRDLRISLAEKknelQ-QkNEEANEKLQRMLSDQKEAETR 3268
                  577889999988888888888744322.13556666666666665555533 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       8.3   4.1e+03     108     188 ..    1763    1846 ..    1747    1857 .. 0.68
   2 ?    3.2   0.1     0.095        47      34      82 ..    2232    2280 ..    2215    2289 .. 0.68
   3 ?    1.4   0.0      0.35   1.7e+02      30      56 ..    2595    2620 ..    2562    2624 .. 0.83
   4 ?    6.7   0.0    0.0082       4.1      15      55 ..    2919    2961 ..    2909    2964 .. 0.81
   5 ?   -2.7   0.8       5.9   2.9e+03     107     158 ..    3214    3265 ..    3201    3310 .. 0.58

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 8.3
                    HHHHHHHHHHHHH.HHHHHTT-SSHHHHHHHHHHHHHTT-...--B-TT-......................-----------B- CS
  FtsK_SpoIIIE  108 aleeLvkemeery.alfreagvrsiaaydgeiaedpldif...gdvflvlDnyddlaaeneritsLsnqgpsygvhvlvtagrel 188 
                    +l+eL++e  + y  +f ++ +++ a+ ++ ia++p +i       +  l   ++l++ n +  +L nq  +    +++t  + +
    KHJ33184.1 1763 TLAELLAEAVDIYsPIFTAEEINEAAF-NDYIAKYPSQITilaTQAVWTLEVEKALEENNSKLQELYNQEVKVLKLLAATVLGDI 1846
                    788888888888878999999999988.777777777764110333334444444444444888888888777777777665555 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.095
                    EGGGS-.S.EEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSS CS
  FtsK_SpoIIIE   34 dlkkmash.llvaGatgsGKStalntLilSlatthtPeeVqliliDykgv 82  
                     +++m  h ++ +G +g+GKS+  + L+++l  + +  e  + +iD+k +
    KHJ33184.1 2232 YQIQMIHHgVMMVGDSGTGKSVSWKLLLQAL-QKVEGIEGIFHIIDPKVM 2280
                    445555332789***********99777765.445555555666666655 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.35
                    EEEEEGGGS-.SEEEE--TTSSHHHHH CS
  FtsK_SpoIIIE   30 plvldlkkmashllvaGatgsGKStal 56  
                    +l++ l+++   l+++G +gsGK+ +l
    KHJ33184.1 2595 ILYSWLAEHK-PLILCGPPGSGKTMTL 2620
                    5556666666.79***********987 PP

  == domain 4  score: 6.7 bits;  conditional E-value: 0.0082
                    --TTEEEEEEETTS-EEEEEGGGS-...SEEEE--TTSSHHHH CS
  FtsK_SpoIIIE   15 ssqlpvalgkeisgnplvldlkkma..shllvaGatgsGKSta 55  
                    +  + + l+ ++ +++l +d +     +hl+++G +gsGK+t 
    KHJ33184.1 2919 EVDVSLVLFNDVLEHVLRIDRVFRQpqGHLILIGVSGSGKTTL 2961
                    555667788999999999998877679**************95 PP

  == domain 5  score: -2.7 bits;  conditional E-value: 5.9
                    HHHHHHHHHHHHHHHHHHHTT-SSHHHHHHHHHHHHHTT---B-TT-..... CS
  FtsK_SpoIIIE  107 raleeLvkemeeryalfreagvrsiaaydgeiaedpldifgdvflvlDnydd 158 
                    r l+  ++++++   + r+ ++   +++++  ++ ++  ++++ +++D +++
    KHJ33184.1 3214 RHLNVGLEKLRDTVDKVRDLRISLAEKKNELQQKNEEANEKLQRMLSDQKEA 3265
                    3333333444444444444444444444444444444444444444444444 PP

>> LOH1CR12  Tumour suppressor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1      0.66   3.3e+02      50     110 ..     345     407 ..     324     412 .. 0.80
   2 ?    0.1   0.1       1.5   7.4e+02      78     113 ..     890     925 ..     861     943 .. 0.76
   3 ?   -0.2   0.1       1.9   9.5e+02      63     105 ..    1411    1452 ..    1405    1456 .. 0.84
   4 ?   10.4   0.2   0.00099      0.49      56     114 ..    3444    3499 ..    3433    3502 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.66
    LOH1CR12  50 dqaklverik.evdakiitllaelrekqkqyasyaealskvnelsd.qlsriqiiledivpll 110
                 +  k+++r + +v+ +i t l+e  +k ++y++ +  +   + ls+  ls+iq+ l++i + l
  KHJ33184.1 345 EILKIAKRYQaTVSFRIDTGLNEASDKVQKYNQLMRDFPLDELLSAtSLSKIQDALNQIFAHL 407
                 55667777652689999********************987777875379*********98766 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 1.5
    LOH1CR12  78 qyasyaealskvnelsdqlsriqiiledivpllEtl 113
                    ++a ++s +++  d l++i+i +++ ++ lEt 
  KHJ33184.1 890 FIREFATSVSLLQVKTDTLASINITIQKSLAELETC 925
                 3467999999999999***************99985 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 1.9
    LOH1CR12   63 akiitllaelrekqkqyasyaealskvnelsdqlsriqiiled 105 
                    i +l++ ++e+  +  +ya a++ ++++  ql +++ i+ d
  KHJ33184.1 1411 SAIDNLIKMTKEMPSRMRQYA-AFEHIQNVLRQLLKVNPIISD 1452
                  568889999999999999997.699999999999999999876 PP

  == domain 4  score: 10.4 bits;  conditional E-value: 0.00099
    LOH1CR12   56 erikevdakiitllaelrekqkqyasyaealskvnelsdqlsriqiiledivpllEtln 114 
                  +r k+v+  +++l +++ + +    +ya+ +s+++ +++++sr+q  ++  v llE l 
  KHJ33184.1 3444 ARAKSVEGTLKKLGESIAKYK---IEYAALISQIEAIKNEMSRVQFKVDRSVRLLESLS 3499
                  566666666666666555444...47899999************************986 PP

>> CHAD  CHAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   7.7    0.0085       4.2      45     156 ..    3208    3317 ..    3200    3380 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0085
                  SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHH.HTS-TTTCGGGHHHHHHHHHHHHHHHHHHH.....HHHTSHHHHHHHHHHHHHHT--S CS
        CHAD   45 vldkeeaaalekelrwlaraLGeaRDldVllerllsrleerlpaaeqealerllkrlekerkrararvl.....aaLdsaryqalldaldallaaer 136 
                  +l +e+ ++l+  l +l  +  ++RDl + l++ +++l+ +++++   a e+l++ l+++++++ +++       aL+ +++++++++ + +l+ + 
  KHJ33184.1 3208 DL-EEQQRHLNVGLEKLRDTVDKVRDLRISLAEKKNELQ-QKNEE---ANEKLQRMLSDQKEAETRKATsleiqVALE-KQETEVAERREIVLN-DL 3297
                  56.78999*********************9988888873.33333...445555555555555444522233533333.333555555555553.33 PP

                  --TSBHHHHHHHHHHHHHHH CS
        CHAD  137 leaepaaaalekrlrkayrk 156 
                  ++aepa ++++k ++   r+
  KHJ33184.1 3298 AKAEPAVQEAAKSVQNIKRQ 3317
                  33666666666666555544 PP

>> DUF3867  Protein of unknown function (DUF3867)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.2       2.3   1.2e+03      79     134 ..    1154    1210 ..    1137    1290 .. 0.58
   2 ?   12.1   3.2    0.0003      0.15      31     153 ..    3161    3296 ..    3153    3313 .. 0.80
   3 ?    2.9   0.4       0.2     1e+02      39     102 ..    3359    3422 ..    3349    3491 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 2.3
     DUF3867   79 ekqlkslgidlkslnknveyesirkslsfqekykekikeksv.ieykikndkndlki 134 
                   k + +l id ++++++v+ +  + + ++  k+++++  +   + ++i+  + dl+i
  KHJ33184.1 1154 SKSFGHLVIDYEQVQTKVNAKYDQWQHEIVTKFAARLGFRAReVYSEIEKARKDLEI 1210
                  555555555544444444433333333333333333332221011223333333222 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 0.0003
     DUF3867   31 slaeGkltlsdfskkiseYmee.nnisqekflniqkkllerYGldeeelekqlkslgidlkslnknve.............yesirkslsfqekyke 113 
                  s+   +l+l  f +k+++Y+     ++   fl+   ++++ Y    e+le+q ++l++ l++l   v+              e  +k+ + +ek ++
  KHJ33184.1 3161 SMVYIHLSLHRFNSKLFKYQGRiTYLTPRHFLDFVAQFVKLYEEKREDLEEQQRHLNVGLEKLRDTVDkvrdlrislaekkNELQQKNEEANEKLQR 3257
                  45556899***********9662678999******************************99999988888889966666655555666666666666 PP

     DUF3867  114 kikeksvieykikndkndlkilleeenvilisekkidlsD 153 
                   ++ ++ +e+  k    ++++ le+++  +   ++i l+D
  KHJ33184.1 3258 MLSDQKEAET-RKATSLEIQVALEKQETEVAERREIVLND 3296
                  6655555444.46667789999999999999999999998 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.2
     DUF3867   39 lsdfskkiseYmeennisqekflniqkkllerYGldeeelekqlkslgidlkslnknveyesir 102 
                    df+ +i+ Y ++  +++   ++++++ l+   +  e++++  k++g  ++ ++ +vey++i 
  KHJ33184.1 3359 RDDFIANIVLYKNDEKMTKSLRMKMRNDYLSNDDFTFEKVNRASKACGPLVQWVQAQVEYSEIL 3422
                  579*********************************************9999999999988775 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.2       4.7   2.3e+03      24      40 ..    1951    1967 ..    1945    1973 .. 0.85
   2 ?    7.6   0.0    0.0058       2.9      11      43 ..    2597    2629 ..    2587    2656 .. 0.78
   3 ?   -0.8   6.1       2.1   1.1e+03     151     204 ..    3236    3298 ..    3175    3327 .. 0.45

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 4.7
      AAA_11   24 GPPGtgKTktivellsq 40  
                  GP GtgKT  + +l  q
  KHJ33184.1 1951 GPAGTGKTESVKALGVQ 1967
                  9*******998877655 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0058
      AAA_11   11 ksalseseitliqGPPGtgKTktivellsqlls 43  
                  +s l e++  ++ GPPG+gKT t+ + l++l +
  KHJ33184.1 2597 YSWLAEHKPLILCGPPGSGKTMTLFSALRKLPN 2629
                  5566666667899*************9999943 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 2.1
      AAA_11  151 klkkskekskskleqerrklkkerkelskeleeaeesle.........eevldeaeivltTls 204 
                  +l+++k++ ++k+e+ ++kl++  ++ ++  +++  sle         +ev ++ eivl  l+
  KHJ33184.1 3236 SLAEKKNELQQKNEEANEKLQRMLSDQKEAETRKATSLEiqvalekqeTEVAERREIVLNDLA 3298
                  111111111112222222222222111111111111111222222222555555555544333 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.2       2.4   1.2e+03       3      26 ..    2241    2264 ..    2239    2272 .. 0.83
   2 ?    3.3   0.0      0.14        72       2      17 ..    2605    2620 ..    2604    2636 .. 0.86
   3 ?    4.4   0.0     0.063        32       3      18 ..    2948    2963 ..    2947    2969 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 2.4
                  EEEEC-TTTCHHHHHHHHHHHHCT CS
       NACHT    3 vilqGeaGsGKTtLlqklalawae 26  
                  v++ G++G GK++  + l +a+++
  KHJ33184.1 2241 VMMVGDSGTGKSVSWKLLLQALQK 2264
                  7899********988877777765 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.14
                  CEEEEC-TTTCHHHHH CS
       NACHT    2 lvilqGeaGsGKTtLl 17  
                  ++il G++GsGKT+ l
  KHJ33184.1 2605 PLILCGPPGSGKTMTL 2620
                  68999********977 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.063
                  EEEEC-TTTCHHHHHH CS
       NACHT    3 vilqGeaGsGKTtLlq 18  
                  +il G +GsGKTtL +
  KHJ33184.1 2948 LILIGVSGSGKTTLSR 2963
                  689**********965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (4363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1322  (0.0737353); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        96  (0.00535445); expected 17.9 (0.001)
Passed Fwd filter:                        53  (0.0029561); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              36  [number of targets reported over threshold]
# CPU time: 2.12u 0.35s 00:00:02.47 Elapsed: 00:00:00.58
# Mc/sec: 22469.50
//
Query:       KHJ33185.1  [L=182]
Description: putative er membrane duf1077 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-45  152.3   6.6    6.8e-45  151.9   6.6    1.1  1  DUF1077   Protein of unknown function (DUF1077)


Domain annotation for each model (and alignments):
>> DUF1077  Protein of unknown function (DUF1077)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.9   6.6   3.8e-49   6.8e-45       3     114 ..      55     166 ..      53     169 .. 0.97

  Alignments for each domain:
  == domain 1  score: 151.9 bits;  conditional E-value: 3.8e-49
     DUF1077   3 keekeelkakkaweialapakslpmnlfmlYmsGnslqifsimmvlmllvnpikallsvnkaFkkleseksksklllqklvyvllqllllalglyklns 101
                 ++e++ lk kkawe+alap+k+lpm++fm+YmsGn++qifsimmv+m++++pi+ ll++n+aF k+es++ ks+l++ k vyvl+q+l+l+lg++k+++
  KHJ33185.1  55 AAEMDVLKLKKAWEVALAPVKQLPMTAFMMYMSGNTMQIFSIMMVVMAFKTPIMGLLAINQAFGKFESDTIKSQLVMVKGVYVLMQILALGLGVWKVDR 153
                 578899********************************************************************************************* PP

     DUF1077 102 mGLLPttssDwla 114
                 mGLLPtt+sDw+ 
  KHJ33185.1 154 MGLLPTTRSDWVY 166
                 ***********85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1402.93
//
Query:       KHJ33186.1  [L=329]
Description: putative serine threonine-protein phosphatase pp2a catalytic subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.1e-37  127.9   0.6    1.1e-36  127.2   0.6    1.3  1  Metallophos      Calcineurin-like phosphoesterase
  ------ inclusion threshold ------
      0.033   13.8   0.0      0.047   13.3   0.0    1.2  1  Glyco_hydro_65N  Glycosyl hydrolase family 65, N-terminal dom
      0.084   13.3   0.2       0.19   12.2   0.2    1.6  1  STPPase_N        Serine-threonine protein phosphatase N-termi


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.2   0.6   1.9e-40   1.1e-36       2     201 ..      71     262 ..      70     265 .. 0.92

  Alignments for each domain:
  == domain 1  score: 127.2 bits;  conditional E-value: 1.9e-40
                  EEEEEESBTBTTCCTHHHHHHHHHHHHHHH.TTESEEEEESTSSSSSHHHHHHHHH.HHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddllre.ekpdlvllaGDlvdrgdlekellel.laalvkypipvylllGNHe........gfeeellnkygylg 89 
                  +++v+gD+H     gq++dl++l++   ++   ++l++  GD+vdrg ++ e++ l +a +++ p ++ +l+GNHe        gf++e+l+kyg+  
   KHJ33186.1  71 PVTVCGDIH-----GQFHDLMELFRIGGPNpDTNYLFM--GDYVDRGYYSVETVTLlVALKIRHPLRITILRGNHEsrqitqvyGFYDECLRKYGN-- 159
                  699******.....**********99955524567777..*******666666666599999999999***************************9.. PP

                  HHHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEETHHHHHHHHHHHSCHHHHCC...HHHHHHHHHHTTCSEEEEEESSESSCSSSCSCCHHH CS
  Metallophos  90 ifsepwrsdaevfnnlplaslgsgslkvlllhGg.spellvsldklgslnleleapepg...dewlkdlekrekadwvivlgHsplyrgsgylfgdea 183
                    +++w+ +++ f++lpl +l+++  ++++lhGg sp + ++ld+++sl++ +e+p++g   d++++d        ++   g+   +rg+gy+fg++ 
   KHJ33186.1 160 --ANVWKFFTDLFDFLPLTALIDN--QIFCLHGGlSPSI-DTLDNIRSLDRKQEVPHEGpmcDLLWSD--------PDDRCGWGISPRGAGYTFGQDI 244
                  ..889*******************..********77777.****************************........99999999999*********** PP

                  HHHHHHHTTESEEEEESS CS
  Metallophos 184 ledllkkygvdlvisGHt 201
                   e +  ++g+ lv ++H+
   KHJ33186.1 245 SEAFNHNNGLTLVARAHQ 262
                  *****************7 PP

>> Glyco_hydro_65N  Glycosyl hydrolase family 65, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   7.9e-06     0.047      26      96 ..     134     204 ..     132     209 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 7.9e-06
                      E----TTTT--.-EEETT-EE-T........TSSS-EE----EEEEEEEEETTEE--GGGS.....EEEEEEEEEE CS
  Glyco_hydro_65N  26 tRgafeeeysdpgtyiaGvYdreiseeanGypeeneelvnlpdwlglrlrvdgeeldldeg.....eildyereLd 96 
                      +Rg++e     + t + G+Yd+     ++G +++++    l d+l+l+  +d++ + l  g     + ld  r+Ld
       KHJ33186.1 134 LRGNHES--R-QITQVYGFYDEC--LRKYGNANVWKFFTDLFDFLPLTALIDNQIFCLHGGlspsiDTLDNIRSLD 204
                      5999999..4.59*******999..68**************************99999766666666666666666 PP

>> STPPase_N  Serine-threonine protein phosphatase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   3.2e-05      0.19      21      41 ..      42      62 ..      30      64 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 3.2e-05
   STPPase_N 21 qLseaEIrqlCakareiFLsQ 41
                qL e +++ lC kare++ ++
  KHJ33186.1 42 QLAEVDVQRLCEKAREVLQDE 62
                799**************9776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2539.21
//
Query:       KHJ33187.1  [L=429]
Description: putative o-acetylhomoserine -lyase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   9.9e-146  485.1   0.0   1.1e-145  485.0   0.0    1.0  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
    6.8e-08   32.2   0.0    1.2e-07   31.4   0.0    1.3  1  DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
    1.8e-07   30.7   0.0      3e-07   30.0   0.0    1.3  1  Aminotran_1_2    Aminotransferase class I and II
    1.1e-06   27.9   0.8    3.1e-06   26.4   0.3    1.9  2  Aminotran_5      Aminotransferase class-V
     0.0011   18.3   0.0     0.0022   17.3   0.0    1.5  1  Beta_elim_lyase  Beta-eliminating lyase
     0.0032   16.1   0.1     0.0047   15.5   0.1    1.2  1  Met_gamma_lyase  Methionine gamma-lyase
  ------ inclusion threshold ------
      0.028   13.1   0.0      0.039   12.6   0.0    1.2  1  SepSecS          O-phosphoseryl-tRNA(Sec) selenium transferas
      0.065   12.1   0.0        0.1   11.4   0.0    1.2  1  GDC-P            Glycine cleavage system P-protein
       0.16   12.2   0.0        0.5   10.6   0.0    1.8  2  Asparaginase_C   Glutaminase/Asparaginase C-terminal domain


Domain annotation for each model (and alignments):
>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  485.0   0.0  5.6e-149  1.1e-145       1     381 [.       9     426 ..       9     427 .. 0.98

  Alignments for each domain:
  == domain 1  score: 485.0 bits;  conditional E-value: 5.6e-149
                      HHHHHHTTTTCHTTTTBSS--B---SBBBESSHHHH...CTTCSSS-SBTTT--HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHTTS-TT CS
  Cys_Met_Meta_PP   1 eTllvhagqekdeqtgavavpiyltstykfkdvdea...fageekgyeYsRsgnptrsvleeriaaLeggeaalavssGmaAiaaailallkaG 91 
                      eTl++hagqe d++t+a+avpiy+++++ f+d++++   f+ ee+g+ YsR+ npt+sv+e+riaaLe+g aa+a ssG+aA++++i al+++G
       KHJ33187.1   9 ETLQLHAGQEIDTATNARAVPIYASTSFAFNDSAHGarlFNLEENGFLYSRISNPTVSVFEKRIAALEKGIAAVASSSGQAAQFMTIAALAHTG 102
                      69*********************************99********************************************************* PP

                      EEEEEESTSSHHHHHHHHHTHHHTTCEEEEESTTSHHHHHHHCCTTEEEEEEESS-TTTT----HHHHHHHHHHTT-EEEEEGTTTHT.TTS-G CS
  Cys_Met_Meta_PP  92 deivvsddlYggtqrllkkvlkklgievkfvdtsdleelekaikentklvylEtptnpllkvvDiekiaklakkagvlvvvDntfasp.llqrp 184
                      d+i+++++lYggt++++k +l++lgi++kf++ +++e++  ai++ntk++y+E+++np l+v+Di++ia++a+++gv++vvDntf ++ +++rp
       KHJ33187.1 103 DNIISTSNLYGGTYNQFKVFLPRLGIHTKFIEGDKAEDFSMAIDKNTKAIYIESIGNPRLNVPDIRAIANIAHDHGVPLVVDNTFGAGgFFVRP 196
                      **************************************************************************************998***** PP

                      GGGT-SEEEEETTTTTTCSSS--EEEEEESSCHHHHHHHHHHH................................HHHT-B--HHHHHHHHHHH CS
  Cys_Met_Meta_PP 185 lklgaDivvhSaTKylgGhsdvvaGvivvkgkeelkkelkflq................................nalGavlspfdawlllrGl 246
                      +++gaDivvhSaTK++gGh+++++G+iv++g+++++k+  +++                                ++lG++l+pf+a++l++G+
       KHJ33187.1 197 IEHGADIVVHSATKWIGGHGTTIGGIIVDSGNFDWGKNGDRFPemvqpspgyhglkfwetfgpacfatrvrveilRDLGSTLNPFAAFQLIQGV 290
                      **************************************99998999************************************************ PP

                      TTHHHHHHHHHHHHHHHHHHHHTSTTEEEEE-TTSTTSTTHHHHHHHSSS.G-SEEEEEESSHHHHHHHHHHC-SSSEECSS-SSSS-EEEETT CS
  Cys_Met_Meta_PP 247 kTLslRlerhqenAlkvAefLekhpkvekvyYpglpshpqhelakkqlkg.aggvlsFelkseeekakkfvdnlklfslaeslGgveslielpa 339
                      +TLslR erh +nAl +A++L+k+p++++v+Ypgl++h +h lakk+l++ +g++l F + +++++ +++vd lk++s+++++G++++l+++p+
       KHJ33187.1 291 ETLSLRAERHGQNALILAQWLQKQPHISWVSYPGLETHYSHVLAKKYLRNgFGSILNFGVLGGSKAGSRVVDGLKMISNLANVGDAKTLAIHPW 384
                      ***********************************************9761566**************************************** PP

                      TTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHH CS
  Cys_Met_Meta_PP 340 smthasipkeereaagvtddliRlsvGiEdvdDliaDlkqal 381
                      ++th ++++ e++a+gvt+dliR+svGiE++dD+i+D++q+l
       KHJ33187.1 385 TTTHSQMTDLEKIASGVTEDLIRISVGIEHIDDIIHDISQSL 426
                      ****************************************98 PP

>> DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0     6e-11   1.2e-07      21     145 ..      58     185 ..      44     204 .. 0.85

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 6e-11
                      S...SHHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHTTTTTT-EEEEESSS-THHHHH....HHHTT-EEEEE-B-TTTSSB-GGGCGGG CS
  DegT_DnrJ_EryC1  21 s...gpeveeFEkafaaylgvkhaiavssGtaAlhlaLralgvgpgdeVIvpsltFvatana....vlelgakpvfvDvdpdtynidpaaieaa 107
                      s   +p+v+ FEk++aa  +   a+a ssG aA  +++ al  + gd +I +s+ + +t n       +lg  + f++ d      ++++   a
       KHJ33187.1  58 SrisNPTVSVFEKRIAALEKGIAAVASSSGQAAQFMTIAALAHT-GDNIISTSNLYGGTYNQfkvfLPRLGIHTKFIEGD------KAEDFSMA 144
                      33559************************************988.**************99722224699*******999......6789999* PP

                      --TTEEEEEEB-GGG...B---HHHHHHHHHHCT-EEEEE- CS
  DegT_DnrJ_EryC1 108 itertkaIlpVhlyG...qvadmdalkaiaakhglkvieDa 145
                      i ++tkaI +  +     +v d+ a+ +ia++hg++++ D 
       KHJ33187.1 145 IDKNTKAIYIESIGNprlNVPDIRAIANIAHDHGVPLVVDN 185
                      ********87666543224459999999**********996 PP

>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   1.5e-10     3e-07      52     237 ..      71     226 ..      58     249 .. 0.79

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 1.5e-10
                    HHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEEES....S-THHHHHHHHTTSEEEEEEBEETTTTEE-HHHHHHHHTTHH CS
  Aminotran_1_2  52 alakflgrseklklkreaavvvgsGagaliealifllklnpgdeilvpdp....tyasyknilrlsggevvryplyseedfhldlealeealkeap 143
                    ++a + +           a v +s  +a++ + i++l + +gd+i++ +     ty ++k  l   g+    ++       +  +e++  a+++  
     KHJ33187.1  71 RIAALEK--------GI-AAVASSSGQAAQFMTIAAL-AHTGDNIISTSNlyggTYNQFKVFLPRLGIHTKFIE-------GDKAEDFSMAIDK-- 147
                    4554444........55.5667777788888888888.88******9997222245555666666788888888.......78999********.. PP

                    CTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTTTCBSSSSHTHHHHGGSTTSTTEEEEEESSSTTSSGGG-EEEEEEEH CS
  Aminotran_1_2 144 egnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsldavatranveeepnllivgslsKafGlaGeRvGyilgna 237
                         tk i++es+ NP    ++ +++++++++a+ +++ l+vD +++++ f        +  +e++ + ++v s  K  G  G  +G i++++
     KHJ33187.1 148 ----NTKAIYIESIGNPR---LNVPDIRAIANIAHDHGVPLVVDNTFGAGGFF-------VRPIEHGAD-IVVHSATKWIGGHGTTIGGIIVDS 226
                    ....99***********7...666667777777******************98.......666777766.********************9987 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.3   1.6e-09   3.1e-06     129     210 ..     138     219 ..      82     223 .. 0.83
   2 ?   -1.7   0.0      0.54   1.1e+03     106     139 ..     371     404 ..     359     412 .. 0.82

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 1.6e-09
                  GGGHHHH--TTEEEEEEESBETTTTEB--HHHHHHHHHHTT-EEEEE-TTTTTTS---HHHHTESEEEEETTTTTSSTT-EE CS
  Aminotran_5 129 ldelekllnektklvaithvsnvtGtiqpveeigklakkkgalvlvDaaqavghipidvkklgvDflafsghKllgPtGiGv 210
                   +++  +++++tk+++i  + n   ++ ++ +i+++a+++g+ ++vD + ++g   +   + g+D+++ s+ K +g  G+++
   KHJ33187.1 138 AEDFSMAIDKNTKAIYIESIGNPRLNVPDIRAIANIAHDHGVPLVVDNTFGAGGFFVRPIEHGADIVVHSATKWIGGHGTTI 219
                  4678899************************************************************************986 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.54
                  HHHHHHHTEEEEEEEBETTSCBEGGGHHHH--TT CS
  Aminotran_5 106 qelakrtgakvkvipldeegeldldelekllnek 139
                  +++ +++++ ++ ++ ++ +  dl+++++ ++e+
   KHJ33187.1 371 ANVGDAKTLAIHPWTTTHSQMTDLEKIASGVTED 404
                  6778889999999999999999999999988876 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   1.1e-06    0.0022      31     212 ..      62     227 ..      57     317 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.1e-06
                      -HHHHHHHHHHHHHTT-SEEEEES-HHHHHHHHHHHH--TTEEEEEETT-HHHHSSTTHHHHC...C--EEEEE-EBTTTBE-HHHHHHHS--S CS
  Beta_elim_lyase  31 dktvnrLedavaelfgkeaalfvpqGtaAnsillkillqrgeevivtepahihfdetgaiael...agvklrdlknkeaGkmdlekleaaikev 121
                      ++tv ++e+++a+l    aa+   +G aA  + +++l++ g+++i t  ++ +  +  + +++    g++ + +++++     +e++  ai++ 
       KHJ33187.1  62 NPTVSVFEKRIAALEKGIAAVASSSGQAAQFMTIAALAHTGDNIIST--SNLYGGTYNQFKVFlprLGIHTKFIEGDK-----AEDFSMAIDK- 147
                      78899999999999888899999999999999999999999999866..56665555555544333677777777777.....8888889998. PP

                      -TTS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEEETTHHHHHHHHTS-CHHHHTTSSEEEEESSS...TT--SS-EEEEE-H CS
  Beta_elim_lyase 122 gaheekiklisltvTnntagGqvvsleelrevaaiakkygiplhlDgARfanaakslgeivkemfsyvDsvtmslkK...dllanvGgvlafrd 212
                           ++k+i+++   n      + +  +r++a+ia+++g+pl++D     n   + g  v+ +  ++D+v+ s++K   + ++ +Gg+++ + 
       KHJ33187.1 148 -----NTKAIYIESIGN----PRLNVPDIRAIANIAHDHGVPLVVD-----NTFGAGGFFVRPIEHGADIVVHSATKwigGHGTTIGGIIVDSG 227
                      .....799***998777....589**********************.....56778899999999**********9977666788999998655 PP

>> Met_gamma_lyase  Methionine gamma-lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   2.3e-06    0.0047     146     238 ..     139     225 ..      90     234 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.3e-06
  Met_gamma_lyase 146 eavkeaikektkliliqrskGyserkslsieeieeiiklvkeinedvivfvdncyGefveekePtevGadliaGsliknpGGgiaktGGyiaG 238
                      e  + ai ++tk i i  s G    + l++ +i+ i ++ ++  + v + vdn +G       P+e Gad++  s  k +GG  +++GG i+ 
       KHJ33187.1 139 EDFSMAIDKNTKAIYIE-SIG---NPRLNVPDIRAIANIAHD--HGVPLVVDNTFGAGGFFVRPIEHGADIVVHSATKWIGGHGTTIGGIIVD 225
                      45566777888888885.666...466888888877776554..5667789****9999999***************************9985 PP

>> SepSecS  O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0     2e-05     0.039     169     196 ..     163     189 ..     133     248 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2e-05
                 B----HHHHHHHHHCCT--EEEEGCCCC CS
     SepSecS 169 rspDdvkeiakiCaeydvPhlvNgAYai 196
                 ++pD +++ia+i ++++vP++v + ++ 
  KHJ33187.1 163 NVPD-IRAIANIAHDHGVPLVVDNTFGA 189
                 6899.*******************9986 PP

>> GDC-P  Glycine cleavage system P-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   5.2e-05       0.1     146     259 ..      94     210 ..      75     220 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.2e-05
                 HHHH-SSS--EEEEETTS-HHHHHHHHHHHGGGT-..EEEEE-GGG--S-...S-EEEEEEEE.S-TTSB----HHHHHHHHHTT-EEEEEE-TTGGGT CS
       GDC-P 146 aaraskkkakkvvvdkkvhpqtlevlktrakglgi..eivevdlteekvtdkekevagvlvqy.pnteGriedlkelvekakkkkslvvvaadllaLtl 241
                 + +a  +  ++++  ++++  t +  k     lgi  + +e d +e+  +   k++ ++ +    n   ++ d++++++ a+++ + +vv     a + 
  KHJ33187.1  94 TIAALAHTGDNIISTSNLYGGTYNQFKVFLPRLGIhtKFIEGDKAEDFSMAIDKNTKAIYIESiGNPRLNVPDIRAIANIAHDHGVPLVVDNTFGAGGF 192
                 3344444556777778888888888888777776622457777777777778899999988761566789***************************** PP

                 B--HHHHT-SEEEEE-TT CS
       GDC-P 242 lkpPgelgaDivvGsaqr 259
                 +  P e gaDivv sa +
  KHJ33187.1 193 FVRPIEHGADIVVHSATK 210
                 *************99865 PP

>> Asparaginase_C  Glutaminase/Asparaginase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       3.7   7.4e+03      48      59 ..      74      85 ..      59     107 .. 0.59
   2 ?   10.6   0.0   0.00025       0.5       6      58 ..     131     184 ..     128     203 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 3.7
                    HHTTT-EEEEEE CS
  Asparaginase_C 48 akargivvvats 59
                    a ++gi  va+s
      KHJ33187.1 74 ALEKGIAAVASS 85
                    335555555554 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00025
                     E--TT--HHHHHHHHHTT--EEEEEEBTTTB--H.HHHHHHHHHHTTT-EEEEE CS
  Asparaginase_C   6 klhpgmdtkvlkallkkgakGvvlegtGvGnlps.allealkeakargivvvat 58 
                     k++ g +++ +  +++k+ k++ +e+ G+  l+  +++  ++ a ++g+++v+ 
      KHJ33187.1 131 KFIEGDKAEDFSMAIDKNTKAIYIESIGNPRLNVpDIRAIANIAHDHGVPLVVD 184
                     5667788888999********************779999999999******985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3190.94
//
Query:       KHJ33188.1  [L=768]
Description: putative glycosyltransferase family 39 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-87  292.4  14.9      6e-87  291.3  14.9    1.6  1  PMT       Dolichyl-phosphate-mannose-protein mannosyltransfer
    1.8e-69  233.3   6.0    1.8e-69  233.3   6.0    2.4  2  PMT_4TMC  C-terminal four TMM region of protein-O-mannosyltra
    1.9e-19   70.2   0.1    5.9e-19   68.6   0.1    1.7  2  MIR       MIR domain
  ------ inclusion threshold ------
       0.07   12.7   0.3       0.18   11.4   0.3    1.6  1  DUF334    Domain of unknown function (DUF334)
        0.2   11.8   1.9        3.2    7.9   0.5    3.1  3  RAMP4     Ribosome associated membrane protein RAMP4


Domain annotation for each model (and alignments):
>> PMT  Dolichyl-phosphate-mannose-protein mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  291.3  14.9   1.7e-90     6e-87       2     244 ..      57     305 ..      56     306 .. 0.98

  Alignments for each domain:
  == domain 1  score: 291.3 bits;  conditional E-value: 1.7e-90
         PMT   2 iltllallirlwrlslpnsvvfdevhfgkfasdYlehsffmdvhpplgkmllalggyLagkdgnftfesigaeyypenvpyvslRlfsallgslivplv 100
                 i+t+la+++r+w +s pn+vvfdevhfgkfas+Yle++ff+dvhpp+gk+l+al g++ g+dg f fe+ig++y ++nvpyv++R+++allg+l+vp+v
  KHJ33188.1  57 IITILAFVTRFWGISHPNEVVFDEVHFGKFASYYLERTFFFDVHPPFGKLLFALMGWFVGYDGRFHFENIGDSYISNNVPYVAYRALPALLGALTVPVV 155
                 89************************************************************************************************* PP

         PMT 101 yltllelgfskltallaallvllenslitlsryilldspLlfftllsmyclvkfe..rkapfsrswwlwllltgvalglavsvKwvglftvllvgllli 197
                 ++++ e+g+   +++l+a l l++n++i ++r+illd++L+f + +s++c+vkf+  r++pf r+ww+wllltg++l++++s+K+vglf+++ +g+ ++
  KHJ33188.1 156 FNIMWESGYTLPACILSACLILFDNAHIGQTRLILLDATLIFAMSCSLLCYVKFYkeRHEPFGRKWWKWLLLTGLSLSCVISTKYVGLFAFVTIGSAVA 254
                 *************************************************************************************************** PP

         PMT 198 welwqllg....dkslllksivkhllaralaliviPvtlylavftvhfwll 244
                 ++lw ll     + +l+l + + h++ara+aliv+P+++yl++f vhf +l
  KHJ33188.1 255 IDLWDLLDinrsQGALSLPEFIRHFTARAIALIVVPFLFYLLWFQVHFAVL 305
                 *******98777677777777***************************987 PP

>> PMT_4TMC  C-terminal four TMM region of protein-O-mannosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   3.8       2.5   8.9e+03     125     125 ..     240     240 ..     194     304 .. 0.49
   2 !  233.3   6.0   5.1e-73   1.8e-69       1     197 [.     541     761 ..     541     762 .. 0.94

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 2.5
    PMT_4TMC 125 Y 125
                 Y
  KHJ33188.1 240 Y 240
                 2 PP

  == domain 2  score: 233.3 bits;  conditional E-value: 5.1e-73
    PMT_4TMC   1 FlkkflelqkamltsnnalteshpyaSepyeWplllrgisywtkneekkqiyllGNpvlwwlstiallvfvllllalllrrqrgvkdl.eeeetrllns 98 
                 Fl+k++elq+am+ +nnalt+shpyaS+p++Wp+llrg+s+wtkn++++qiy+lGNpv+wwl++++l+vf+++++a++l+ +rgv+ l +++++rl+ s
  KHJ33188.1 541 FLQKWFELQRAMFFHNNALTSSHPYASQPFMWPFLLRGVSFWTKNDTRQQIYFLGNPVGWWLTSSLLAVFIGIIGADQLSIRRGVDSLdTRSRMRLYSS 639
                 9***************************************************************************************5555555**** PP

    PMT_4TMC  99 glflllgwalhylPfflmgRvlflhhYlpAllfailllaalldfllkslkkslkkk.........................klvklivvvvllvlviav 172
                 ++f++l+wa+hylPf+lmgR+lflhhYlpA+l+++l+++a+l+f++  + +                               + ++i++vv+l++vi+ 
  KHJ33188.1 640 TGFFFLAWAMHYLPFYLMGRQLFLHHYLPAHLASTLVTGAILEFIFCVRLTD---GdfleddkkgtltknkparlkipnqdLSSSWIALVVILTIVIGG 735
                 *********************************************9332222...2467999*****************998999************** PP

    PMT_4TMC 173 FiffspltyGlpgts.eevkklkwls 197
                 +++f+pltyG+pg+s ++v+++kwls
  KHJ33188.1 736 WYYFLPLTYGFPGLSpSQVQARKWLS 761
                 ***************9********96 PP

>> MIR  MIR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0   0.00064       2.3      65      94 ..     334     362 ..     326     368 .. 0.82
   2 !   68.6   0.1   1.7e-22   5.9e-19      12     176 ..     352     506 ..     350     516 .. 0.92

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00064
         MIR  65 likwgkvyRlkHlaTgryLaseeekkspls 94 
                 +i++ +v+ +kH  T +yL+s+ + + pl+
  KHJ33188.1 334 TIDYLDVIQIKHKETNSYLHSHPD-RYPLR 362
                 56666899**************99.66665 PP

  == domain 2  score: 68.6 bits;  conditional E-value: 1.7e-22
         MIR  12 fHshqdeyltiseqqqkqevflritlypsadaanssraLWeievvqkdawrgglikwgkvyRlkHlaTgryLaseeekksplseseddqkevsaygleg 110
                  Hsh d+y+    + + +++ +++t yp  d +n+    W i ++  + + g+ +k+++++Rl+H+aT   L  ++   sp + ++++ ++vs  ++ +
  KHJ33188.1 352 LHSHPDRYPLRYDDGRISSQGQQVTGYPYSDTNNH----WQILPIDNNVTLGRPVKNNDIVRLRHIATNTVLLTHDV-ASPYYPTNQEFTTVSIEDASN 445
                 4********9999999999999*************....**************************************.*******99999999999965 PP

         MIR 111 fegdnDkveifekksttgmksaklvprdsyvrlqHvvtgcwLhstsvklkkekfekvqqkvicake 176
                  + +    ++fe + ++g++ +++++ +  ++l+H  t+ +++++s +l++++ +  qq+v  +k+
  KHJ33188.1 446 QRVN---DTLFEIRIENGKQGQEFKSFSGHFKLIHFPTKVAMWTNSKPLPDWGYK--QQEVNGNKN 506
                 5444...7899999*****************************************..***977666 PP

>> DUF334  Domain of unknown function (DUF334)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.3   4.9e-05      0.18     144     221 ..     586     666 ..     576     671 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.9e-05
      DUF334 144 qkrqkqlftg..igamllvfmlfalimtigrdfmsflh.vdvlqnaiasklkasegfisvlwyiayglpyvlaiglfigly 221
                 ++rq+  f g  +g  l   +l  +i  ig d +s+   vd l+     +l +s gf+ + w + y   y++   lf+  y
  KHJ33188.1 586 DTRQQIYFLGnpVGWWLTSSLLAVFIGIIGADQLSIRRgVDSLDTRSRMRLYSSTGFFFLAWAMHYLPFYLMGRQLFLHHY 666
                 689998888766899999999999999********9754**************************9777888888887766 PP

>> RAMP4  Ribosome associated membrane protein RAMP4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.19   6.8e+02      29      47 ..      46      64 ..      29      65 .. 0.74
   2 ?    7.9   0.5    0.0009       3.2      37      53 ..     237     253 ..     234     254 .. 0.86
   3 ?   -1.0   0.0      0.52   1.8e+03      34      51 ..     718     735 ..     699     737 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.19
       RAMP4 29 kkekkspvgpwlLglfiFV 47
                + e ++ ++  ++ +++FV
  KHJ33188.1 46 EPEWDYRISLSIITILAFV 64
                4567899***********9 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0009
       RAMP4  37 gpwlLglfiFVViGSai 53 
                 ++  +glf+FV iGSa+
  KHJ33188.1 237 STKYVGLFAFVTIGSAV 253
                 56679**********97 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.52
       RAMP4  34 spvgpwlLglfiFVViGS 51 
                  + + ++L++++ +ViG+
  KHJ33188.1 718 LSSSWIALVVILTIVIGG 735
                 455778999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (768 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.40
# Mc/sec: 5710.06
//
Query:       KHJ33189.1  [L=415]
Description: putative nuclear pore protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-08   34.4  13.0       0.16   12.9   0.1    4.9  4  WD40      WD domain, G-beta repeat
    5.7e-05   22.2   0.1     0.0059   15.6   0.0    2.9  3  Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping prot


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.1   0.00022         2       6      37 ..      17      47 ..      12      48 .. 0.81
   2 !    9.0   0.9   0.00031       2.8       6      37 ..      60      95 ..      52      95 .. 0.78
   3 !   12.9   0.1   1.8e-05      0.16       6      37 ..     248     284 ..     245     285 .. 0.88
   4 !    8.6   0.2   0.00041       3.7      15      38 .]     371     394 ..     343     394 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00022
                EEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  6 tltGHss.vtslafspdgawlasGsdDgtvriW 37
                +  GH + v++  f+++g+ + +Gs Dgt+++ 
  KHJ33189.1 17 H--GHRDmVSATTFNSYGNRFGTGSVDGTIKVH 47
                4..8944699999*******989********95 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00031
                EEESS.SSEEEEEEETTSSE..EEEE.ETTSEEEEE CS
        WD40  6 tltGH.ssvtslafspdgaw..lasG.sdDgtvriW 37
                ++++H s ++ +++ p   +  l+++   Dg+ riW
  KHJ33189.1 60 SWSAHsSEIHQIQWLPATIYpnLIASlAADGKFRIW 95
                5789*666****77777777997766656******* PP

  == domain 3  score: 12.9 bits;  conditional E-value: 1.8e-05
                 EEESSSS.EEEEEEETTSSE....EEEEETTSEEEEE CS
        WD40   6 tltGHss.vtslafspdgaw....lasGsdDgtvriW 37 
                 +l+GH++ v+++a+sp +      +a+ ++Dg +r++
  KHJ33189.1 248 ELSGHKGlVRDIAWSPGNVRghdvIATVCKDGYLRVF 284
                 589**8889****99999999998788899*****97 PP

  == domain 4  score: 8.6 bits;  conditional E-value: 0.00041
                 EEEEETTSSEEEEEETTSEEEEEE CS
        WD40  15 slafspdgawlasGsdDgtvriWd 38 
                  + f+ dg ++ + sdDg+v +W+
  KHJ33189.1 371 KVEFDADGLLIGTTSDDGKVSLWK 394
                 3449999999744589*******6 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.016   1.4e+02     183     215 ..      16      48 ..       3      75 .. 0.76
   2 !   15.6   0.0   6.6e-07    0.0059      75     220 ..     138     290 ..     119     304 .. 0.78
   3 ?    1.4   0.0     0.014   1.3e+02     193     215 ..     372     394 ..     347     399 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.016
    Ge1_WD40 183 kieehsliveaafspdGtalatasedGevkffq 215
                 +  +  +++ ++f + G    t s dG++k + 
  KHJ33189.1  16 QHGHRDMVSATTFNSYGNRFGTGSVDGTIKVHN 48 
                 444455888999*****************9875 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 6.6e-07
    Ge1_WD40  75 hvsskillavdekgslfvykveeve...skllvslllkveapietvvsesdrviWCPyipeedaeesdddeaskl.lvltrgdkaeiwsvdmiaskygs 169
                 +++++ l+ +d +gs++ y+ ++ e   s + ++  +  e+p     + s ++ + P ++ + + + ++  ++ l lv++    a +w    i+   + 
  KHJ33189.1 138 FSRHSFLALIDRSGSVVAYENNDPEnleSWVEIDSFVACEKPAR-GEEISFKIAFDPNLSPTYTAIMQGVPKDALgLVVAAMYTASVWRTREITHSVSL 235
                 455677889999*******9865432337899999999999865.4678899*******999777655544444438999999***********99998 PP

    Ge1_WD40 170 gelsveeieegllkieehs.liveaafspdGt....alatasedGevkffqvyled 220
                 g+ + +e ++  ++++ h  l+ + a+sp       ++at ++dG+++ f+v+   
  KHJ33189.1 236 GSETRKEFYR-AIELSGHKgLVRDIAWSPGNVrghdVIATVCKDGYLRVFKVWTPS 290
                 8877777765.68999997689999999964322238***************9765 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.014
    Ge1_WD40 193 aafspdGtalatasedGevkffq 215
                   f +dG  + t+s dG+v +++
  KHJ33189.1 372 VEFDADGLLIGTTSDDGKVSLWK 394
                 5799***************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 3267.34
//
Query:       KHJ33190.1  [L=507]
Description: putative protein spg20 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-52  178.5   7.1    2.3e-52  178.0   7.1    1.2  1  Senescence  Senescence-associated protein


Domain annotation for each model (and alignments):
>> Senescence  Senescence-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.0   7.1   1.3e-56   2.3e-52       1     183 []     231     409 ..     231     409 .. 0.96

  Alignments for each domain:
  == domain 1  score: 178.0 bits;  conditional E-value: 1.3e-56
  Senescence   1 ivkgadvisrgivktsnllakgiqkgaeyyiskskpsekPlefsprtrkalrkvrkvsgqaakvsaktvggvgdaagrvgaavaksvkkkgtksseees 99 
                 iv+ a+ +sr iv++s+ ++k++q++a+++++k+kp++kPl+f p+t+++++k+rk+++ a+++s+ ++g+v+++a+++ga++ k++++k +    +  
  KHJ33190.1 231 IVSKAALASRFIVTSSSQVTKTLQSQADSFTKKTKPNSKPLKFEPTTHARIEKARKLTEDAVTISSLAAGQVQKYAQNFGASLTKRSNSKSK----SGV 325
                 8999**********************************************************************************777664....556 PP

  Senescence 100 kpgksekktaagevlnasldafstvldgleeaakqllsatsdattkvvehkYGeeAgevtrdvletagNvglvyvdvrgvgrka 183
                 +p  ++  + +++++n+sl a+st++dg+++a++ lls ts+a+t+vv+hkYG+eAge++++++++++N+glvy+d++gv+r+a
  KHJ33190.1 326 GPDGKPIANFKPGLINKSLVAISTIADGIDQAGRSLLSGTSTAVTTVVSHKYGPEAGEISKNIGGGVRNCGLVYIDATGVTRRA 409
                 66667899**************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 3711.34
//
Query:       KHJ33191.1  [L=797]
Description: putative c6 transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-12   47.2   0.0    6.9e-12   45.0   0.0    2.3  2  Fungal_trans  Fungal specific transcription factor domain
    2.5e-06   27.5   9.8    5.8e-06   26.3   9.8    1.6  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
       0.56   10.2   4.2        1.2    9.2   4.2    1.5  1  zf-C2HC5      Putative zinc finger motif, C2HC5-type


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.0   1.1e-15   6.9e-12       6     263 ..     123     384 ..     114     388 .. 0.61
   2 ?   -3.6   0.0      0.77   4.6e+03     110     148 ..     711     751 ..     705     754 .. 0.64

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 1.1e-15
  Fungal_trans   6 snfhpqfpilhkpsflpkt.......ssenssksayaspllllailalGalfsesetkesnssltses..qefiafplraeili...hedfsspsss 90 
                    +f+  +p+lh p+f +           +  +   +    lll +l l a+f +  ++  +++  +    +ef+a pl+         +    + +s
    KHJ33191.1 123 LHFSTEMPFLHPPTFRNRMrqaamprDPNLVTADLEEGRVLLLGVLTLTARFHPGLASHHSPNGLDPLaaSEFYAAPLA----NalgPTIRHLSQPS 215
                   3455666999999999999665555322222222223333334444444444444444433333332244445555554....04443334445555 PP

  Fungal_trans  91 lwilqsLlllelyektssdralher.hhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLP 186
                   ++ +q+Ll+l lye   ++  ++++ +     +   + +    + y          + e+e rrR+ w++F++D++++   +rp++++ + + ++LP
    KHJ33191.1 216 IENVQALLMLGLYEWSQTRGLSAWLnV---GHQPINDSRTPLPSTYPR------DGAMEKEVRRRTLWSCFIMDRMLSAGKNRPTMISIERLAVQLP 303
                   8*************9999977777633...333444444444445555......667889*************************99********** PP

  Fungal_trans 187 cddddlwesddaseetlvetk......lsneeksrkiasfllaLkkilskiagsllsiekqlqqrdlqseklswveelerald 263
                   c+dd + ++ +  ++     k       + +   +   s  l+L +i ++++++l+s + + +      +k s++ +l+r+l+
    KHJ33191.1 304 CSDDQFLFAHNGPTSLFSP-KwmtpneKNVPAPDEGVLSCYLRLVEIFGDLSDWLHSGGRKGEKLPPW-DKASKMYTLRRRLK 384
                   ****666665555544444.357555322223333344455677777777888777777776666666.77777777777666 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.77
  Fungal_trans 110 ralherhhgvavrlarslgLhrnpsyvgkks..lwklweee 148
                   +++h ++++ a++ +  + L +n+++ ++ +  ++ +w++ 
    KHJ33191.1 711 QSQHPMTFSSAISSSIVPPLLDNKNSASDNDdqSFFRWIDS 751
                   67788888888887777777666666554445677777765 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   9.8   9.7e-10   5.8e-06       2      34 ..      22      55 ..      21      59 .. 0.94

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 9.7e-10
                S-HHHHHCT---STSSSS..-HHHHHCTHHHCCCC CS
     Zn_clus  2 aCdnCrkkKvKCdakkPa..CsnCkklnleCtfys 34
                aC +Cr+ KvKC  + P+  C++C+++n eCt y+
  KHJ33191.1 22 ACARCRRSKVKCVNNGPNstCKSCAQYNRECT-YP 55
                9*************999999************.76 PP

>> zf-C2HC5  Putative zinc finger motif, C2HC5-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   4.2    0.0002       1.2      10      42 ..      13      47 ..       5      50 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0002
    zf-C2HC5 10 rHpLleaapnClnC..GkiiCakeglskpCsfCgs 42
                 H+++     C  C   k+ C+ +g++++C +C++
  KHJ33191.1 13 PHKMVRSSIACARCrrSKVKCVNNGPNSTCKSCAQ 47
                59999999******7779***************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (797 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.45
# Mc/sec: 5361.67
//
Query:       KHJ33192.1  [L=547]
Description: putative duf1237 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.2e-179  597.6   0.0   1.4e-179  597.4   0.0    1.0  1  Glyco_hydro_125  Metal-independent alpha-mannosidase (GH125)


Domain annotation for each model (and alignments):
>> Glyco_hydro_125  Metal-independent alpha-mannosidase (GH125)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  597.4   0.0  7.7e-184  1.4e-179       1     416 []      94     526 ..      94     526 .. 0.99

  Alignments for each domain:
  == domain 1  score: 597.4 bits;  conditional E-value: 7.7e-184
                      SHHHHHHHHHHHHHHHHHTEEEETT.....................EEEE--BSS-SEEHHHHHHHHGGGGGGTTTSGGGHHHHHHHHHHHHHH CS
  Glyco_hydro_125   1 dpdlarlfenafpntldttvkwkeka...................eltfvitGDidamWlRDsanqlasYlpllkedeklaslirgvinlqary 75 
                      ++dlarlfen+fpntldttv+w+ +                    +++f++tGDi+a+WlRDsanql +Ylpl+k d+ + +li g+in+qa++
       KHJ33192.1  94 NKDLARLFENSFPNTLDTTVRWHVDGsiekahlddishqeekwqgAQSFIVTGDINAEWLRDSANQLIQYLPLAKYDPGIYNLILGAINTQAEF 187
                      589**********************99******************************************************************* PP

                      HHH-TT-SEE-..SS...SS---SS..--BS-TT.....EEE----HHHHHHHHHHHHHHHHHH---TT--HHHHHHHHHHHHHHHHGG..... CS
  Glyco_hydro_125  76 ilispYanaFqppeesglkkteneaaqkdkvepeydeelvfeckyelDSlaaflqlsseyyeatgdleffeekwvkaveaildvleeqqegtyd 169
                      +++spY+naFqpp+ s+l++t+n+  q+d v+p+y+++ vfeckyelDSla+fl ls++++++tg++ef++++w+ka+++il+v+++q+e+t+d
       KHJ33192.1 188 VIESPYCNAFQPPRASNLRATSNG--QRDVVHPAYEPSFVFECKYELDSLAHFLLLSNSFHNHTGSTEFITSRWLKALKSILTVIDQQSESTFD 279
                      *********************998..56****************************************************************** PP

                      ..GHHH.H-----B-SSSSGGGS-HHHHT-S----.SSS---SB-TTS-B-SSSEEHHHHHHHHHHHHHHHHHHHHTS--.HHHHHHHHHHHHH CS
  Glyco_hydro_125 170 edgkkvlksaYtfqretnratetlsneglGnpvkentGlvrsaFRpSDDatifqflipaNmmlaveLeklaeileklaekelakearklakeir 263
                      +++ + +k+ Ytf+r+t+++tetls +g+Gnp++++tGlvrsaFRpSDDati++flipaN+++aveL+++a+il++++++ lak ++  a+ i+
       KHJ33192.1 280 ATSGEFKKNIYTFKRQTDQGTETLSLSGVGNPLNSGTGLVRSAFRPSDDATILGFLIPANAQMAVELQRTAKILHSTQNSFLAKVLEVRAQVIK 373
                      ***************************************************************************999988************* PP

                      HHHHHHSEEEETTTEEEE-SEE-SSS-EE----SSSS-STTHHHHTSS-TT-HHHHHHHHHHTST.TSTTEEE-SS-EEE--TTS-TTEEEHHH CS
  Glyco_hydro_125 264 egiekhavvehkkfgkiyAyEvDGyGsallmDDanvPsLLslpllgyvkkddevYqnTrkfvlsk.anpYflkGkalsgiGgphvglgkaWpma 356
                      +g+++h+vv+h+k+g+++AyEvDGyGs+++mDDanvPsLL+lpllg+v+k++ vYqnTrk++l+k  npY+l+G++++giGgphvgl++aWpm+
       KHJ33192.1 374 DGVWNHGVVNHQKYGRVFAYEVDGYGSHIMMDDANVPSLLALPLLGFVEKNNVVYQNTRKMLLEKqGNPYYLTGQEFHGIGGPHVGLRHAWPMS 467
                      ****************************************************************999*************************** PP

                      HHHHHHT---HHHHHHHHHHHHHTSTTSSS--SEEETTEEEEES-S-BHHHHHHHHHHHH CS
  Glyco_hydro_125 357 livqaltsdddeeiaellklllkstaglglvhEsvnvdnekkftRswFawanslfgelil 416
                      l+vqa+tsddd+ei ++l+++l+s+  lgl+hE++nv+ ++ ftR+wFawans+f++li+
       KHJ33192.1 468 LLVQAMTSDDDNEILNCLTMVLDSSP-LGLIHEAINVNFNRIFTRPWFAWANSVFAQLII 526
                      ************************97.*******************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (547 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 3572.65
//
Query:       KHJ33193.1  [L=81]
Description: hypothetical protein EV44_g3312 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       348  (0.0194099); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.43
# Mc/sec: 569.25
//
Query:       KHJ33194.1  [L=397]
Description: hypothetical protein EV44_g5964 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.20s 00:00:00.67 Elapsed: 00:00:00.35
# Mc/sec: 3375.54
//
Query:       KHJ33195.1  [L=1169]
Description: putative dna repair protein rhp26 rad26 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      4e-64  216.5   4.1    6.5e-64  215.9   0.1    2.3  2  SNF2_N        SNF2 family N-terminal domain
    7.5e-19   68.1   0.2    3.8e-18   65.8   0.0    2.4  2  Helicase_C    Helicase conserved C-terminal domain
    1.1e-05   25.5   0.0    1.1e-05   25.5   0.0    3.2  3  ResIII        Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
       0.27   11.3   6.0       0.17   11.9   3.7    1.8  1  Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C
       0.62   10.3   9.8        6.4    7.1   1.3    3.5  3  ABC_tran_CTD  ABC transporter C-terminal domain
        9.8    5.2  18.5        1.2    8.2   8.4    2.5  2  Atg14         Vacuolar sorting 38 and autophagy-related subun


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.7     0.037   1.1e+02     231     303 ..      82     159 ..      67     183 .. 0.75
   2 !  215.9   0.1   2.2e-67   6.5e-64      50     350 .]     410     714 ..     392     714 .. 0.94

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.037
                 -TTTT--HHHHHHHTHHHHH.HHHHHHHHHHHTT-S.TTEE---GGGT...--S---EEEEEEEEE--HHHHHHHH.. CS
                 xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx.xxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 231 reepfgekqtfdkllqrpie.aqaekgrsrLlqllq.rlmlrrakkdv...eknlPpkteeiiflklskverksYnrl 303
                 +e+ +++k+  +  ++ +   a+++ + +rL++ l+ ++++ r  ++v   + ++ + ++ i+ ++   +er+ Y r 
  KHJ33195.1  82 HEDELDSKRLEKIKINIEKLeAKKRTQKQRLNNTLNnSTVWDRCTREVenlNNEIRNLKKDITDIESRIEERHQYGRE 159
                 6666666666666665544348999999*****9986799********755556999999999999999999999844 PP

  == domain 2  score: 215.9 bits;  conditional E-value: 2.2e-67
                 HHHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH.............. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............. RF
      SNF2_N  50 eakqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkk.............. 134
                 e+++++ GGi+ DemGLGKT+qv+++++ +++   ++       +l +p++++ Pa++l+qW+ne++++++++++ +l+ +g+ +              
  KHJ33195.1 410 ELYSQQVGGIIGDEMGLGKTIQVISFLAGLHY---SK-------KLTKPVIVITPATVLQQWVNEFHKWWPPMRVSILHSSGSGMmnlrlenklddrtk 498
                 678999**********************4433...33.......3569**********************************999************** PP

                 ........-----------------EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHH CS
                 ........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 135 ........mkkkntkvapklladydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlyg 225
                         ++ + +++ +k+ ++ +v++ttY  l++ a      + l ++ew + vlDEgh+++n ++ ++  +++L+t nr+i++GTP+qn+l +l++
  KHJ33195.1 499 vygaskkkSSAHVKRIVDKIIHKGHVLLTTYAGLQTYA------NILLDIEWGYAVLDEGHKIRNPNTAVTIYCKELKTPNRIIISGTPMQNNLVELWS 591
                 *****9886666778999*****************999......8****************************************************** PP

                 HHHHH-TTTT--HHHHHHHTHHHHH............HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH........... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 226 LlkfLreepfgekqtfdkllqrpie............aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkal 312
                 L++f+ +  +g+  +f++ +++pi+             +a+k++++L +++++++l r k dv  +lP+kte+++f+kl+k +r +Y+         +l
  KHJ33195.1 592 LFDFIYPMRLGTLVSFRQTFETPIKqggyanstnlqiMTATKCAEELKTVISPYLLQRLKIDVASDLPKKTEQVLFVKLTKPQRDAYE--------RFL 682
                 ***********************************9999*************************************************........677 PP

                 .........HHHHHH-HHH-HHHHHHHHHHHHH---XX CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 313 akllkrseaalkssskskekilelllelrqacnhpqlv 350
                 a+  ++s ++ + +s      l+ +  l+++cnhp+l+
  KHJ33195.1 683 ASEEVSSIMNGTRQS------LYGIDILKKICNHPDLI 714
                 777777777777777......9*************985 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.2       2.1   6.4e+03      20      56 ..      77     112 ..      65     119 .. 0.69
   2 !   65.8   0.0   1.3e-21   3.8e-18       4     111 .]     736     847 ..     733     847 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2.1
                 EEEESSHHHHHHHHHHHHHTTSTEEEEST.TSTHHHHH CS
  Helicase_C  20 lifvntidrlekvklllekkgikvavlhg.elpqnere 56 
                 l++++  d+l+  +  lek +i++ +l + + +q++r+
  KHJ33195.1  77 LLMIEHEDELD--SKRLEKIKINIEKLEAkKRTQKQRL 112
                 66777777887..3334677899999988556777765 PP

  == domain 2  score: 65.8 bits;  conditional E-value: 1.3e-21
                 HHHHHHH.HHTTTTSEEEEEESSHHHHHH.HHHHHHHT.TSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSH CS
  Helicase_C   4 eallell.kleeeggkilifvntidrlek.vklllekk.gikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlprnv 97 
                 +++ +ll   +  ++k+l+f++ +++l+   +++ ++   +++++++g+++ + r+  +++fn + +++ +L++t+v++ G++++++n V +fd+++n+
  KHJ33195.1 736 KIVEKLLqLWKGFNHKTLLFCQGVQMLDLlENFI-KNIgCYNYLRMDGRTNIKLRQTLVDKFNkSPDIHvFLLTTKVGGLGVNLTGANRVLIFDPDWNP 833
                 55555554457899*************8744444.33347***********************6678888***************************** PP

                 HHHHHHHTTSSSTT CS
  Helicase_C  98 tsyiqriGRtgRag 111
                 ++ iq++ R++R g
  KHJ33195.1 834 STDIQARERAWRLG 847
                 ************86 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   1.9      0.38   1.1e+03      55     122 ..      68     150 ..      48     181 .. 0.65
   2 !   25.5   0.0   3.6e-09   1.1e-05       5     169 ..     398     581 ..     394     583 .. 0.74
   3 ?   -3.6   0.8       3.3     1e+04     105     105 ..     914     914 ..     848     955 .. 0.50

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.38
                 ........-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHHTH.............. CS
      ResIII  55 e.......kflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqsldadseee..........e 122
                 e       + l++ ++ +l ++ le++k  +++    ++k +++++ +++ ++st ++ +  +++ l++++++            
  KHJ33195.1  68 ErditnraNLLMIEHEDELDSKRLEKIKINIEKLE--AKKRTQKQRLNNTLNNSTVWDRCTREVENLNNEIRNLkkditdiesrI 150
                 24444455899999999999999999988888775..344444444444446667777777777777776644344454454443 PP

  == domain 2  score: 25.5 bits;  conditional E-value: 3.6e-09
                 -HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHG....................GGGTGG... CS
      ResIII   5 reyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleef....................kkflseayk 83 
                  +yQ+  i+ l e +   ++  g+i  + G GKT+  +++ + l+ ++k  k ++++   ++l+q+ +ef                    +  l+++ +
  KHJ33195.1 398 FNYQKIGIQWLGELY--SQQVGGIIGDEMGLGKTIQVISFLAGLHYSKKLTKPVIVITPATVLQQWVNEFhkwwppmrvsilhssgsgmmNLRLENKLD 494
                 566776666666555..58889999999*****************99999999999999***********66666666666666666665333333333 PP

                 .GEEEESSS-B--..............-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.TTTHHH.HHT---SEEEEEESS- CS
      ResIII  84 eigkkvsgdkkka.......kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakkswrei.lekfkeavllglTATp 169
                 + +k++   kkk+         k +++ ++l+tt+  l+          + ll+ +  + + DE H+++  ++   i  + +k   ++ +++Tp
  KHJ33195.1 495 DRTKVYGASKKKSsahvkriVDKIIHKGHVLLTTYAGLQTYA-------NILLDIEWGYAVLDEGHKIRNPNTAVTIyCKELKTPNRIIISGTP 581
                 333333333333355555567788999999999999999888.......889999999***********9888888766777888888888888 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 3.3
                 S CS
      ResIII 105 k 105
                 k
  KHJ33195.1 914 K 914
                 1 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   3.7   5.8e-05      0.17      46     108 ..      90     150 ..      79     152 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 5.8e-05
  Baculo_PEP_C  46 qLnalsedlksllaeldtrldtlltnLtdalnalq..dtlrneLtnlnsiltnLlssvtNinstL 108
                   +L++++ ++++    l+++  t+ ++L+++ln+ +  d  + e +nln+++ nL  ++t i+s +
    KHJ33195.1  90 RLEKIKINIEK----LEAKKRTQKQRLNNTLNNSTvwDRCTREVENLNNEIRNLKKDITDIESRI 150
                   55555555555....5556777788888888877777************************9866 PP

>> ABC_tran_CTD  ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   1.3    0.0021       6.4       8      33 ..      89     114 ..      86     122 .. 0.89
   2 ?    6.6   0.4    0.0031       9.1       8      37 ..     127     156 ..     123     168 .. 0.86
   3 ?   -1.6   0.0       1.1   3.4e+03       3      22 ..    1133    1152 ..    1132    1156 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0021
  ABC_tran_CTD   8 releeleaeIeaLEeeiaeleaelad 33 
                   ++le++   Ie+LE+++ +  ++l++
    KHJ33195.1  89 KRLEKIKINIEKLEAKKRTQKQRLNN 114
                   89*****************9999986 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0031
  ABC_tran_CTD   8 releeleaeIeaLEeeiaeleaeladpely 37 
                   re e+l +eI  L ++i+++e ++++   y
    KHJ33195.1 127 REVENLNNEIRNLKKDITDIESRIEERHQY 156
                   99********************99987766 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 1.1
  ABC_tran_CTD    3 sykeqreleeleaeIeaLEe 22  
                    + k+  e++++ ++ ++LE 
    KHJ33195.1 1133 TSKQTTEFKKMLDKVARLEF 1152
                    5799999*********9995 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   8.4   0.00039       1.2      21      86 ..      88     153 ..      59     163 .. 0.85
   2 ?    1.9   2.4     0.032        96      42     122 ..     256     349 ..     243     364 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00039
       Atg14  21 perlyelrerlaklksekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqel 86 
                 ++rl++ ++ + kl ++k + k++++  l++ +  ++ +++++n+++ +++lk++i d+++r++e 
  KHJ33195.1  88 SKRLEKIKINIEKLEAKKRTQKQRLNNTLNNSTVWDRCTREVENLNNEIRNLKKDITDIESRIEER 153
                 789******************************9999999********************999985 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.032
       Atg14  42 kkkiekalegke...eaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklk...........kRrsdleslq 122
                 k++i+k+ e +e   +++ +ed+   ++++++++ s+i + +e ++ +++k +   + i e k  l + +d +            kRrs  +  +
  KHJ33195.1 256 KRRIQKLSEDPEdhfQSCPEEDNYSVESDQINSKSSEIDEYSESTSPISHKNEPICETITEDKVDLTGADDGNEltyqsrlkswvKRRSA-ARKK 349
                 56677777777777788899999999*****************************************99999888777777777544444.3333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1374  (0.0766356); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.82u 0.25s 00:00:01.06 Elapsed: 00:00:00.42
# Mc/sec: 8386.43
//
Query:       KHJ33196.1  [L=1644]
Description: putative bah domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-18   66.6   1.4      2e-18   66.6   1.4    4.8  5  zf-HC5HC2H_2  PHD-zinc-finger like domain
      2e-17   63.2   0.0    6.1e-17   61.6   0.0    1.9  1  BAH           BAH domain
    3.4e-11   42.8  59.7      6e-06   26.1   9.1    6.3  6  PHD           PHD-finger
    7.4e-09   35.0   7.5    7.4e-09   35.0   7.5    5.4  6  PHD_2         PHD-finger
     0.0024   17.7  54.9     0.0038   17.1   4.8    6.2  6  C1_1          Phorbol esters/diacylglycerol binding domain (C
  ------ inclusion threshold ------
      0.046   14.5   0.0       0.13   13.1   0.0    1.8  1  ELM2          ELM2 domain
        1.2    9.2  39.5          1    9.3   5.3    4.7  4  Prok-RING_1   Prokaryotic RING finger family 1


Domain annotation for each model (and alignments):
>> zf-HC5HC2H_2  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   2.4    0.0059        15      55      86 ..     361     392 ..     346     398 .. 0.84
   2 ?   -2.8   0.2       2.8   7.2e+03      38      64 ..     774     800 ..     768     803 .. 0.71
   3 ?   -0.8  11.2      0.65   1.7e+03      52      85 ..     964     998 ..     942    1031 .. 0.80
   4 !   66.6   1.4   7.8e-22     2e-18      13      99 ..    1090    1176 ..    1085    1204 .. 0.86
   5 ?   -4.4   0.1         7   1.8e+04      50      62 ..    1297    1309 ..    1288    1310 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0059
  zf-HC5HC2H_2  55 kekCllCkkr..kGaciqCskkeCktafHvtCal 86 
                    ++C  C+k   +  ++ C+   C++++H++C+ 
    KHJ33196.1 361 VKSCKRCNKYcaSNDSVDCAV--CQNTYHMICIN 392
                   578999999866677899998..*********85 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.8
  zf-HC5HC2H_2  38 vaerepvdvekikkerlkekCllCkkr 64 
                   +++ +  d +k+ +++   +C +C+++
    KHJ33196.1 774 EHDDSAYDNNKVIRKKKVFQCKFCNTK 800
                   555566677777777788899999875 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.65
  zf-HC5HC2H_2  52 erlkekCllCkkr...kGaciqCskkeCktafHvtCa 85 
                   ++   +C++C++    +  ci C++  C+ + H +C 
    KHJ33196.1 964 QENMMSCAVCSEIeplTDQCISCKD--CRMTVHRNCY 998
                   445789******9666667777776..*********5 PP

  == domain 4  score: 66.6 bits;  conditional E-value: 7.8e-22
  zf-HC5HC2H_2   13 lkktsderwvHvlCallvpevsfsnvaerepvd.vekikkerlkekCllCkkr.kGaciqCskkeCktafHvtCalaaglvmeledlek 99  
                    lk+t++++wvHv+Ca+++pev+f n +  ep + +  i+++r+k  C +Ck++ +Gac+ C++  C+   Hv Ca++ag+ + +e l+ 
    KHJ33196.1 1090 LKRTANNNWVHVTCAVFTPEVKFGNSKALEPSEgIPLIPASRYKGICEVCKSNsRGACVSCHE--CHIPVHVECAHQAGYLLGFEVLPV 1176
                    89*************************************************9879*******9..**************9988877654 PP

  == domain 5  score: -4.4 bits;  conditional E-value: 7
  zf-HC5HC2H_2   50 kkerlkekCllCk 62  
                    k+e +k+ C++C+
    KHJ33196.1 1297 KPEITKKVCVTCD 1309
                    4566889999996 PP

>> BAH  BAH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.6   0.0   2.4e-20   6.1e-17       3     118 ..     208     320 ..     206     323 .. 0.86

  Alignments for each domain:
  == domain 1  score: 61.6 bits;  conditional E-value: 2.4e-20
                 EETTGEEEEEETTSTTEEEEEEEEEEEEETTST.CEEEEEEEEEEECGGGSTTTTHCCCT.TEEEEEEEEEEEEGGGEEEEEEEEEHHHHCTECCHCHH CS
         BAH   3 yavGdfVyfddtstdepyqirrIeeLkenakne.eaeatvlvdwflrpeetksalklrqk.rElfltrqseilplaairgkcrVvllsdleeaqnylpk 99 
                 ++v+d Vy+ ++   epy+ +rI e+  + +++ +    ++++wf+rp+++   ++ ++  r +++t +sei pl++ rgkc++ ++s++ +++ +l  
  KHJ33196.1 208 LQVNDHVYLISEPPGEPYYLGRIMEFLHANNDSsQPIDSLRLNWFYRPKDI---GRKANDtRQVYATMHSEISPLTSLRGKCQIKHKSEIDKLD-DL-R 301
                 79*********************997555555537788899**********...55555559********************************.55.3 PP

                 CSTTEEEEEEEEETTTTEE CS
         BAH 100 klddtFycslvydptaktf 118
                 + +d F ++ ++d++  +f
  KHJ33196.1 302 RTPDCFWYEKLFDRYIHRF 320
                 6*********999976666 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   9.1   2.3e-09     6e-06       2      51 ..     364     412 ..     363     413 .. 0.92
   2 ?    0.1   0.2       0.3   7.7e+02      40      51 ..     788     799 ..     779     800 .. 0.66
   3 !   23.9  11.7   1.1e-08   2.8e-05       2      51 ..     970    1016 ..     969    1017 .. 0.87
   4 ?   -0.2   0.0      0.36   9.2e+02      22      35 ..    1096    1109 ..    1095    1114 .. 0.83
   5 !    9.6  10.7   0.00033      0.84       1      31 [.    1135    1163 ..    1135    1166 .. 0.92
   6 ?    0.3   0.2      0.26   6.8e+02      38      50 ..    1389    1401 ..    1381    1403 .. 0.66

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 2.3e-09
                 BTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   2 CavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCke 51 
                 C+ C+k   ++++ v C  C++++H+ C++ppl +++     w C  C++
  KHJ33196.1 364 CKRCNK-YCASNDSVDCAVCQNTYHMICINPPLLKKPSRGFAWACGPCSK 412
                 99****.9**************************7777666*******85 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.3
                 HSSTBSSTTTHT CS
         PHD  40 pegewlCekCke 51 
                 +++ ++C+ C++
  KHJ33196.1 788 KKKVFQCKFCNT 799
                 444899999975 PP

  == domain 3  score: 23.9 bits;  conditional E-value: 1.1e-08
                  BTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD    2 CavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCke 51  
                  CavC++ +   ++ ++C++C+ ++H +C+++ ++  ++ + +w+C+ C +
  KHJ33196.1  970 CAVCSEIEPLTDQCISCKDCRMTVHRNCYGVVDN--RNLS-KWTCDMCAN 1016
                  ******66679*********************88..3333.7******86 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.36
                  SCEEETTTSSSTHS CS
         PHD   22 krwfHqkClkpple 35  
                  ++w+H++C  ++ e
  KHJ33196.1 1096 NNWVHVTCAVFTPE 1109
                  58******988765 PP

  == domain 5  score: 9.6 bits;  conditional E-value: 0.00033
                  SBTTTTSTTSTTSCEEEETTTSCEEETTTSS CS
         PHD    1 rCavCkkksdeeeelvqCdgCkrwfHqkClk 31  
                  +C+vCk+  +  +  v+C++C+  +H++C +
  KHJ33196.1 1135 ICEVCKS--NSRGACVSCHECHIPVHVECAH 1163
                  6******..78******************75 PP

  == domain 6  score: 0.3 bits;  conditional E-value: 0.26
                  SHHSSTBSSTTTH CS
         PHD   38 ekpegewlCekCk 50  
                  + ++  ++C +C+
  KHJ33196.1 1389 NSKSIAYQCHQCH 1401
                  3444489999996 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.6         4     1e+04       6      11 ..     363     368 ..     360     368 .. 0.67
   2 ?    1.0   1.3      0.13   3.2e+02       5      35 ..     377     410 ..     373     411 .. 0.73
   3 ?   -1.4   0.1      0.71   1.8e+03      31      36 .]     838     843 ..     830     843 .. 0.76
   4 !   35.0   7.5   2.9e-12   7.4e-09       2      36 .]     981    1015 ..     980    1015 .. 0.95
   5 ?   -3.0   0.1       2.2   5.7e+03      24      35 ..    1020    1031 ..    1018    1031 .. 0.77
   6 ?    2.1   7.6     0.054   1.4e+02       4      19 ..    1147    1162 ..    1144    1165 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 4
       PHD_2   6 sCdkCs 11 
                 sC++C+
  KHJ33196.1 363 SCKRCN 368
                 466664 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.13
       PHD_2   5 lsCdkCsvaVHasCYGvskesdgee...WlCrrC 35 
                 + C+ C+   H+ C   +  ++      W C  C
  KHJ33196.1 377 VDCAVCQNTYHMICINPPLLKKPSRgfaWACGPC 410
                 78************87655555443556888877 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.71
       PHD_2  31 lCrrCe 36 
                 lCrrC+
  KHJ33196.1 838 LCRRCA 843
                 79**95 PP

  == domain 4  score: 35.0 bits;  conditional E-value: 2.9e-12
       PHD_2    2 npllsCdkCsvaVHasCYGvskesdgeeWlCrrCe 36  
                  ++ +sC+ C++ VH++CYGv+++    +W+C+ C+
  KHJ33196.1  981 DQCISCKDCRMTVHRNCYGVVDNRNLSKWTCDMCA 1015
                  788***********************99******6 PP

  == domain 5  score: -3.0 bits;  conditional E-value: 2.2
       PHD_2   24 esdgeeWlCrrC 35  
                  ++++++++C  C
  KHJ33196.1 1020 PQVSVQYKCVLC 1031
                  55677899*999 PP

  == domain 6  score: 2.1 bits;  conditional E-value: 0.054
       PHD_2    4 llsCdkCsvaVHasCY 19  
                   +sC +C + VH +C 
  KHJ33196.1 1147 CVSCHECHIPVHVECA 1162
                  69*************5 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   4.7   2.7e-05      0.07      11      44 ..     361     392 ..     355     394 .. 0.91
   2 ?   -1.8   0.2       1.2     3e+03      25      35 ..     788     798 ..     782     800 .. 0.75
   3 !   17.1   4.8   1.5e-06    0.0038       9      48 ..     965    1003 ..     961    1007 .. 0.88
   4 ?    4.6   1.6     0.012        31       9      47 ..    1006    1045 ..    1000    1051 .. 0.84
   5 !    9.3   7.9   0.00039      0.99      11      46 ..    1133    1165 ..    1129    1168 .. 0.91
   6 ?    0.1   0.4      0.29   7.5e+02      26      35 ..    1392    1401 ..    1384    1403 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.7e-05
                 --B-TTT-SB--SSSS-EEEETTT--EE-CCCCT CS
        C1_1  11 ptfCkhCgeflwgkekqglkCswCkllvHkkChe 44 
                  + Ck C++ +   +   + C++C+ ++H  C++
  KHJ33196.1 361 VKSCKRCNKYC--ASNDSVDCAVCQNTYHMICIN 392
                 578********..*****************9975 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.2
                 SS-EEEETTT- CS
        C1_1  25 ekqglkCswCk 35 
                  k  ++C+ C+
  KHJ33196.1 788 KKKVFQCKFCN 798
                 57789999997 PP

  == domain 3  score: 17.1 bits;  conditional E-value: 1.5e-06
                  SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS-S CS
        C1_1    9 kqptfCkhCgeflwgkekqglkCswCkllvHkkChekvpk 48  
                  ++++ C+ C e+   +  q+++C++C+++vH +C+  v++
  KHJ33196.1  965 ENMMSCAVCSEIE-PLTDQCISCKDCRMTVHRNCYGVVDN 1003
                  56889****9976.89******************988876 PP

  == domain 4  score: 4.6 bits;  conditional E-value: 0.012
                  SS--B-TTT-SB--SSSS-EEEETTT--EE-CC.CCTTS- CS
        C1_1    9 kqptfCkhCgeflwgkekqglkCswCkllvHkk.Chekvp 47  
                   ++ +C+ C++    + ++ +kC  C + + ++ C+e ++
  KHJ33196.1 1006 LSKWTCDMCANDKNPQVSVQYKCVLCPIEFTERkCAESLK 1045
                  56678******9966*************999888999876 PP

  == domain 5  score: 9.3 bits;  conditional E-value: 0.00039
                  --B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS CS
        C1_1   11 ptfCkhCgeflwgkekqglkCswCkllvHkkChekv 46  
                  ++ C+ C++     +  +++C++C++ vH +C++++
  KHJ33196.1 1133 KGICEVCKSNS---RGACVSCHECHIPVHVECAHQA 1165
                  67899**9999...99****************9986 PP

  == domain 6  score: 0.1 bits;  conditional E-value: 0.29
                  S-EEEETTT- CS
        C1_1   26 kqglkCswCk 35  
                  + +++C++C+
  KHJ33196.1 1392 SIAYQCHQCH 1401
                  67899***98 PP

>> ELM2  ELM2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   4.9e-05      0.13       2      20 ..     512     529 ..     511     603 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.9e-05
        ELM2   2 RVGpkYQAeiPdllepeer 20 
                 R+Gp++QA +P + ++   
  KHJ33196.1 512 RIGPRHQANVPAWYGRP-V 529
                 9***********98754.4 PP

>> Prok-RING_1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   7.2    0.0071        18       5      35 ..     362     391 ..     359     393 .. 0.90
   2 ?    9.3   5.3    0.0004         1       5      36 ..     968     999 ..     964    1004 .. 0.86
   3 ?   -2.7   0.1       2.3   5.9e+03       4      16 ..    1025    1037 ..    1023    1039 .. 0.81
   4 ?    8.3   6.9   0.00082       2.1       4      39 ..    1133    1166 ..    1130    1172 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0071
  Prok-RING_1   5 kkCpvCgkelkeedDiVvCpeCgtpyHraCy 35 
                  k+C+ C+k  +++ D V C +C   yH  C 
   KHJ33196.1 362 KSCKRCNKYCASN-DSVDCAVCQNTYHMICI 391
                  68*****998887.9************9995 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0004
  Prok-RING_1   5 kkCpvCgkelkeedDiVvCpeCgtpyHraCye 36 
                   +C vC++     d  + C +C    Hr+Cy 
   KHJ33196.1 968 MSCAVCSEIEPLTDQCISCKDCRMTVHRNCYG 999
                  58****987777788****************5 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 2.3
  Prok-RING_1    4 gkkCpvCgkelke 16  
                   + kC +C  e++e
   KHJ33196.1 1025 QYKCVLCPIEFTE 1037
                   679****999986 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.00082
  Prok-RING_1    4 gkkCpvCgkelkeedDiVvCpeCgtpyHraCyekag 39  
                   + +C+vC+ + + +   V C eC  p H +C ++ag
   KHJ33196.1 1133 KGICEVCKSNSRGA--CVSCHECHIPVHVECAHQAG 1166
                   668******98888..*****************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1644 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1185  (0.066094); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.94u 0.27s 00:00:01.21 Elapsed: 00:00:00.47
# Mc/sec: 10440.64
//
Query:       KHJ33197.1  [L=875]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-35  121.9  23.4    1.2e-28  100.0  18.4    2.1  2  TRP       Transient receptor potential (TRP) ion channel
    6.5e-20   71.9   0.0    1.2e-19   71.1   0.0    1.4  1  TRP_N     ML-like domain


Domain annotation for each model (and alignments):
>> TRP  Transient receptor potential (TRP) ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.2     1e-09     9e-06      30      83 ..     252     305 ..     215     309 .. 0.85
   2 !  100.0  18.4   1.3e-32   1.2e-28     131     408 ..     321     590 ..     307     606 .. 0.84

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 1e-09
         TRP  30 aaahvaasvlslflyfQsvafigmlsvnyPpvlaawtqnfaWsmglirvsfmqk 83 
                 ++  ++  + + +  +Q+v+++++l++nyP+++++ ++ +aWs++ ++ sf q+
  KHJ33197.1 252 LLRLITPGFADCLQHIQFVVLTAGLKINYPGFYQPIVSKLAWSILAFNYSFFQN 305
                 666677778899999************************************997 PP

  == domain 2  score: 100.0 bits;  conditional E-value: 1.3e-32
         TRP 131 r..GikrvaekagiestnafmtgllffliliallvvlvllfKlllellark.klikedrlkefrknwlgilkgallrlilifffqllvlclfeft..qr 224
                 +  G++++ +  gi +t+ ++ ++ + l++i+++ ++ + + +++++  rk + i+e++l+   kn+   ++ ++  ++  f  +l+ l+lf++t  ++
  KHJ33197.1 321 GtfGLEKLSQLIGIAQTENLWNSMAISLLAIIATSLMTIQVGFFIRWTNRKlNDIQEEDLRS--KNMPFSIGNIIRIIFNYFLLPLVALSLFQLTiaSK 417
                 145******************************************87766644455566654..8888888888888888999************5333 PP

         TRP 225 dsaavvvlAvillalflgvllffafrvlitarkskrlhknpaylLysdkkvlnkyGflyeqyrasrywffvpllvylfvkalfialaqgsGkvQviall 323
                 + + +v lA +ll+ ++g++++++  +++t +k         + L++d +++  +G ly+ y   +  f+++ ++++fv+++ i++ q+sG++Q ++l 
  KHJ33197.1 418 SPTYTVGLALFLLLFIVGLAIWLLNVIISTKQK---------SYLFDDLRTVLLFGSLYCTYSDHATSFVAIPIMLTFVRGVAIGAIQASGITQLVLLA 507
                 335566788888888888877777777766666.........37******************************************************* PP

         TRP 324 iiEllylvlliwlrPyed.krtnvlniiisvvkvlnvilllaFseefglseivktvvGvvlivinavlalvlliliivnaiialls 408
                 ++E++ +  +  +rP+++  + n+ +i +s+++++n +l++ F  +++++e  k+ +G+ +++i    ++vl++  ++nai  +l+
  KHJ33197.1 508 VCEVITILTVHGFRPFQSyTSMNAYHISFSAIRLINLLLMISFDPSLDVNEGSKGWIGYAILLIY---SIVLILGFLLNAIQRILE 590
                 ****************984689*************************************999998...556666666666665555 PP

>> TRP_N  ML-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   0.0   1.3e-23   1.2e-19       2     138 ..      15     203 ..      14     204 .. 0.87

  Alignments for each domain:
  == domain 1  score: 71.1 bits;  conditional E-value: 1.3e-23
       TRP_N   2 vtssfenClens.........qftaskfdvtf...tpdnk....tvvfnvtgt....................................ssienkavtl 48 
                 ++++f+nCl++          q+++++++v f   + +++    tv++nvtg+                                    + + nk++tl
  KHJ33197.1  15 AFVDFRNCLSERtlhdqplalQLVPQFVNVIFnssS-PDHnlniTVWVNVTGStagsaprltlppandtnywnsnntasggkieaipspD-VINKQTTL 111
                 7899****666456777999************6632.3336999*******************************************954.55666*** PP

       TRP_N  49 elkveaygyevvnetvdpCdanvkglCPlgpgfkinasgvlkvseevvseipsi........aYsipdldatvrvriystgeateiaCvsatitngkt 138
                 ++++++++y+ ++e+v +Cd   +g CPlgp   ++ + +l  +  v +++p +        +Y+++++ + ++v +y ++ea+ei+C+s  it++ +
  KHJ33197.1 112 YNSINFLNYKQFSEYVPFCDYVENGACPLGPI--WSSH-NL--PMGVPERFPHFgfsynsysTYALASIAGLLKV-KYGDKEASEIGCISIIITPEIS 203
                 *******************************9..4444.34..44455899*9999*******************.77678**************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (875 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 6033.55
//
Query:       KHJ33198.1  [L=526]
Description: putative oxysterol-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-87  293.9   0.0    1.8e-79  267.3   0.0    2.1  2  Oxysterol_BP  Oxysterol-binding protein


Domain annotation for each model (and alignments):
>> Oxysterol_BP  Oxysterol-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  267.3   0.0     1e-83   1.8e-79       1     272 [.      44     325 ..      44     329 .. 0.94
   2 !   25.0   0.3   4.3e-10   7.8e-06     313     357 ..     328     374 ..     325     392 .. 0.81

  Alignments for each domain:
  == domain 1  score: 267.3 bits;  conditional E-value: 1e-83
                   HHHCCHTTSTT-BCCCS---GGGEEEEEHHHHHHHCCTTCHHHHHHHC.SSHHHHHHHHHHHHHHCCCGCTSTSSSEEE---TT-EEEEEETT.... CS
  Oxysterol_BP   1 slwsilkkciGkDLskislPvffneplSlLqrlaedleyselLdkaakeddsleRlayVaaFalSsyastikrrlkKPFNPlLGEtfelvred.... 93 
                   +++s+l+  +G DLs+++lP+f++ep+S+L+r+++++ ++elL    + +d+++R++ V++F++S+++ ++   +kKP+NP+LGEtf+++++     
    KHJ33198.1  44 HIISQLR--PGADLSRVVLPTFILEPRSMLERITNFMAHPELLLPLPQIEDPIQRFISVVRFYMSGWHIKP-PGVKKPLNPILGETFSCYWQFsdnt 137
                   589****..***************************************999********************.799****************545686 PP

                   CEEEEEEEEEETTTTEEEEEEEE..CTEEEEEEEEEEEEE-SSEEEEEE-SEEEEEEEEE....SEEEEEEE--EEEEE-TTTTS-EEEEEEEEEEE CS
  Oxysterol_BP  94 kgfrfiaEQVsHhPpvsAfhaes..egweldgeikvkskflgkslevkpeGtahlellkk....sgehYtwtkpttivhniivgklwvelsgeveit 184
                   kg+ +i+EQ+sHhPp s+++++   +++++dg +k++skflg+s+   +eG+a+l++l++    ++e+Y +t+p++++++ii+gkl +el++++ ++
    KHJ33198.1 138 KGY-YISEQTSHHPPKSSYFYMIpeHYIRIDGCLKPRSKFLGNSAASLMEGIAVLRFLNRggsfKKESYIVTQPNMYARGIIFGKLKFELGDHSFVR 233
                   777.*****************999899******************************77678889******************************** PP

                   ETTT--EEEEEEE---SSS---SSEEEEEEEE.TTS-EEEEEEEETTTEEEEEETTSTTS--EEEEETT-....BSXXGCGSSTTBCCCCCCH CS
  Oxysterol_BP 185 nhstgdkakleFkkkglfsskksnkvegkvkd.kkkevlyeisGkwdeelyikkkktekkeeeedaseks....kvkekeeqeefeseklWka 272
                     + g +a++eFk+kg+f+ +++n++ g +k+ +++e lye+sG+w++e++ik++kt+kke   +a++++     v+++eeq e+es++lW +
    KHJ33198.1 234 CPEHGLSADIEFKTKGYFG-GAYNNIGGSIKNdRTGEILYELSGSWSGEMKIKDSKTGKKEVLFNATKAKhtppLVRPIEEQGERESNRLWLK 325
                   888***************5.89*********7699***********************99999888888445679****************87 PP

  == domain 2  score: 25.0 bits;  conditional E-value: 4.3e-10
                   HHHHTT-HHHHHHHHHHHHHHHHHHHHHH.CCTT----SSEEEEE.T CS
  Oxysterol_BP 313 raleegdideAeeeKkrlEekQRerrker.eekkewkpkwFekek.d 357
                   +a++e++++ A+ eK+++E+ QR+++++r e+  +w+p +F+ ++ +
    KHJ33198.1 328 QAIRERNHELATYEKSKIEDMQRDEAAKRiEDGVKWHPHLFRPVQaE 374
                   6899*************************755549******998841 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (526 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       457  (0.0254894); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3693.92
//
Query:       KHJ33199.1  [L=342]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-15   57.6   4.0    1.6e-15   57.6   4.0    2.6  2  SNARE_assoc  SNARE associated Golgi protein


Domain annotation for each model (and alignments):
>> SNARE_assoc  SNARE associated Golgi protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   4.0     9e-20   1.6e-15       4     119 ..     118     232 ..     111     233 .. 0.93
   2 ?    0.7   0.1     0.039     7e+02      24      40 ..     259     275 ..     253     295 .. 0.71

  Alignments for each domain:
  == domain 1  score: 57.6 bits;  conditional E-value: 9e-20
  SNARE_assoc   4 evllvaaGvlfglllgtlvtslgallGaslayllgrylgrkalrrkllsekrvkalerlverygflallllrllpivPrdlvnyvaGltr.vsfkrFf 100
                  ++ l++ G++fg+  g+++++ ++++G++ +++++r ++ k+++r +++ +r++al++ +e+ g ++l ++rl+p +P++l+n+++++++ v++  F+
   KHJ33199.1 118 STTLTISGFVFGFPNGWFIVASATICGSLASFYASRTIFLKYVNRLVGQDRRFEALASVLEKDGLKILCMIRLCP-LPFSLSNAALSTFPtVKPISFT 214
                  6678999********************************************************************.79*****9988864399***** PP

  SNARE_assoc 101 latfiGsipwalvyaylGs 119
                  lat+i ++p++l+++++Gs
   KHJ33199.1 215 LATAI-TSPKLLIHVFIGS 232
                  *****.89*********97 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.039
  SNARE_assoc  24 slgallGaslayllgry 40 
                  ++g+++G+++++++ ++
   KHJ33199.1 259 FAGVIIGSTVGWFIYQR 275
                  56777777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2523.14
//
Query:       KHJ33200.1  [L=210]
Description: putative splicing factor u2af subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.5e-08   32.8  19.3    4.7e-07   29.6   2.5    2.9  3  zf-CCCH    Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    0.00048   19.9   0.0    0.00078   19.2   0.0    1.4  1  RRM_1      RNA recognition motif. (a.k.a. RRM, RBD, or RNP do
     0.0058   16.6   3.3     0.0058   16.6   3.3    3.2  3  zf_CCCH_4  Zinc finger domain
  ------ inclusion threshold ------
      0.019   15.6   3.2       0.62   10.8   0.2    2.4  2  Torus      Torus domain
        3.4    7.9   8.3       0.49   10.6   1.1    2.4  2  zf-CCCH_3  Zinc-finger containing family


Domain annotation for each model (and alignments):
>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   2.5   1.3e-10   4.7e-07       4      26 ..      16      38 ..      14      39 .. 0.92
   2 ?   -1.5   0.1      0.75   2.7e+03      15      19 ..      84      88 ..      84      88 .. 0.78
   3 !   12.0   4.8   4.3e-05      0.16       2      25 ..     143     166 ..     142     168 .. 0.89

  Alignments for each domain:
  == domain 1  score: 29.6 bits;  conditional E-value: 1.3e-10
                HCBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH  4 elCrffmrtGyCkyGdrCkFaHg 26
                ++C f+++ G+C++GdrC++ H+
  KHJ33200.1 16 VNCSFYYKIGACRHGDRCSRKHV 38
                79********************8 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.75
                -TTGG CS
     zf-CCCH 15 CkyGd 19
                Ck+G+
  KHJ33200.1 84 CKFGE 88
                99985 PP

  == domain 3  score: 12.0 bits;  conditional E-value: 4.3e-05
                 HCHCBCHHHHHS--TTGGG-SSBS CS
     zf-CCCH   2 ktelCrffmrtGyCkyGdrCkFaH 25 
                 ++e C++ + +  C +G++C+F+H
  KHJ33200.1 143 FREACCRLNSGEGCVRGGFCNFIH 166
                 6899******55************ PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   2.2e-07   0.00078      21      69 ..      85     133 ..      72     134 .. 0.93

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 2.2e-07
                 TTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  21 kfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 kfG+i+++ ++ ++++   g  + +F+ +++A+kA +aln + +  r++
  KHJ33200.1  85 KFGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKACDALNSRWYAARPI 133
                 8***********9****************************99887776 PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   3.3   1.6e-06    0.0058       1      15 [.      18      33 ..      18      34 .. 0.96
   2 ?    0.1   0.0      0.26   9.4e+02       9      13 ..      84      88 ..      83      88 .. 0.77
   3 ?    4.1   1.0     0.015        53       9      19 .]     156     166 ..     155     166 .. 0.95

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.6e-06
   zf_CCCH_4  1 Ckfflq.GtCkkGdkC 15
                C f+ + G C++Gd+C
  KHJ33200.1 18 CSFYYKiGACRHGDRC 33
                99************** PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.26
   zf_CCCH_4  9 CkkGd 13
                Ck+G+
  KHJ33200.1 84 CKFGE 88
                99996 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.015
   zf_CCCH_4   9 CkkGdkCrFaH 19 
                 C +G  C+F+H
  KHJ33200.1 156 CVRGGFCNFIH 166
                 99********9 PP

>> Torus  Torus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   0.00017      0.62      69      98 ..      14      44 ..       8      51 .. 0.75
   2 ?    5.1   0.4      0.01        37      71      92 ..     146     167 ..     134     180 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00017
                T--B-HH.HHHT--SSGGG-SSB-S---SS- CS
       Torus 69 esyfClf.FarGlCakGkkCeylHrlPteed 98
                +++ C f +  G C +G +C+  H  P+ ++
  KHJ33200.1 14 DKVNCSFyYKIGACRHGDRCSRKHVKPSYSQ 44
                45556550566*************9998765 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.01
                 -B-HHHHHT--SSGGG-SSB-S CS
       Torus  71 yfClfFarGlCakGkkCeylHr 92 
                  +C   +   C++G  C+++Hr
  KHJ33200.1 146 ACCRLNSGEGCVRGGFCNFIHR 167
                 5566556667***********8 PP

>> zf-CCCH_3  Zinc-finger containing family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.1   0.00014      0.49       6      30 ..      16      41 ..      11      56 .. 0.80
   2 ?    1.1   0.4      0.12   4.4e+02      15      28 ..     155     168 ..     141     176 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00014
   zf-CCCH_3  6 ddcyffyy.stctkGdscpfrheeaa 30
                 +c f+y    c  Gd+c+ +h + +
  KHJ33200.1 16 VNCSFYYKiGACRHGDRCSRKHVKPS 41
                57999995379***********9865 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.12
   zf-CCCH_3  15 tctkGdscpfrhee 28 
                  c +G  c f h +
  KHJ33200.1 155 GCVRGGFCNFIHRK 168
                 47777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1460.26
//
Query:       KHJ33201.1  [L=508]
Description: hypothetical protein EV44_g4599 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       883  (0.0492498); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 3771.36
//
Query:       KHJ33202.1  [L=305]
Description: hypothetical protein EV44_g3362 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-08   33.0   0.0    8.2e-08   32.0   0.0    1.5  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type
    0.00084   19.0   1.5     0.0015   18.2   1.5    1.4  1  zf-C2H2_10       C2H2 zinc-finger


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0   9.1e-12   8.2e-08       3      85 ..      65     147 ..      63     161 .. 0.94

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 9.1e-12
  Retrotran_gag_2   3 kkdakalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsalg 85 
                      k+d+  + +I + + d ++++ + + tak+ Wd+Lke+y  +sa+    l++++  l ++++ ++ ++++kl+e+  +++ ++
       KHJ33202.1  65 KQDKNIRIAISQLVPDVVFHNFDCTYTAKQCWDNLKEFYFPNSAEDIDDLLQEFWGLTIEDDVDIDEFVQKLTEIRAKINLID 147
                      789999999******************************************************************99999876 PP

>> zf-C2H2_10  C2H2 zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   1.5   1.7e-07    0.0015       3      20 ..     230     247 ..     229     250 .. 0.91

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 1.7e-07
  zf-C2H2_10   3 kitCSYChetGHtRAkCe 20 
                 +++C YC+  GH R +C+
  KHJ33202.1 230 NKKCAYCNRRGHLRESCF 247
                 79************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1081  (0.0602934); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.21s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2472.79
//
Query:       KHJ33203.1  [L=254]
Description: hypothetical protein EV44_g5927 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.35
# Mc/sec: 2155.99
//
Query:       KHJ33204.1  [L=334]
Description: putative 26s proteasome regulatory subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-32  111.0   0.0    6.3e-32  110.0   0.0    1.5  1  JAB         JAB1/Mov34/MPN/PAD-1 ubiquitin protease
    5.9e-11   42.8   0.4    1.2e-10   41.8   0.4    1.5  1  MitMem_reg  Maintenance of mitochondrial structure and functi
    1.4e-07   31.3   0.0    2.5e-07   30.5   0.0    1.4  1  Prok-JAB    Prokaryotic homologs of the JAB domain


Domain annotation for each model (and alignments):
>> JAB  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.0   0.0     1e-35   6.3e-32       3     117 ..      33     143 ..      31     144 .. 0.96

  Alignments for each domain:
  == domain 1  score: 110.0 bits;  conditional E-value: 1e-35
                 SCEEEEEHHHHHHHHHHHHHHHHHTS--EEEEEEEESSSEEEEEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHCTT.SEEEEEEEESSSS-SS CS
         JAB   3 vqavhleslvllkildhalrtekeeeevmGlliGelnddttveitnvfalpfeetekdvdavsldqeylekksellkklrgr.ervvGWYhshpditvw 100
                  ++v ++sl+llk+l+h + +     evmGl++Ge+ dd tv++++vfa+p+++t  +v+av+++ +  ++++++l ++ gr e vvGWYhshp++++w
  KHJ33204.1  33 SETVYISSLALLKMLRHGRAGVPM--EVMGLMLGEFIDDFTVRVVDVFAMPQSGTGVSVEAVDPVFQ--TNMMDMLRQT-GRpETVVGWYHSHPGFGCW 126
                 689*********************..**************************************999..*********9.999**************** PP

                 --HHHHHHHHHHHHHST CS
         JAB 101 lsevdvrtqalyqrmde 117
                 ls+vd++tq++++++++
  KHJ33204.1 127 LSSVDINTQQSFEHLTP 143
                 ************99876 PP

>> MitMem_reg  Maintenance of mitochondrial structure and function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   0.4   1.9e-14   1.2e-10       1      78 [.     178     294 ..     178     322 .. 0.89

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 1.9e-14
  MitMem_reg   1 Eaeei..gvehllkpsiqdasstlstglnrqyyslki.......................................lqerldlikdYlkkveegelpvn 58 
                 E+++   +++hl+kps q    +l++glnr+yys++i                                       l++ + l++ Y k+v e+   ++
  KHJ33204.1 178 EPRQStsNLGHLNKPSLQ----SLIHGLNRHYYSIAInyrktaleenmlmnlhkhvwteglqmedfrtesarnrdrLKKLVGLAEGYEKRVREEMELSK 272
                 8999999***********....**********************************************************************8876677 PP

  MitMem_reg  59 he.ilrnlqkllnllP..hlet..e 78 
                 ++  +r+++k++   P  hle+  +
  KHJ33204.1 273 EQlKTRYVGKMD---PkkHLEEvgK 294
                 778*********...9877777332 PP

>> Prok-JAB  Prokaryotic homologs of the JAB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   4.2e-11   2.5e-07       4      91 ..      42     134 ..      39     157 .. 0.77

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 4.2e-11
    Prok-JAB   4 vlsalvaharrahpeEtcGlllgkeseseevivvplvnewsn....rfeipdpedslarlkf...earerglevvgiwHSHpggsarPSetDrrd 91 
                 +l ++++h r+  p E  Gl+lg+  ++  v+vv++  ++++    +  +++ +  +++ ++   + + r ++vvg +HSHpg +   S+ D+++
  KHJ33204.1  42 ALLKMLRHGRAGVPMEVMGLMLGEFIDDFTVRVVDVFAMPQSgtgvS--VEAVDPVFQTNMMdmlRQTGRPETVVGWYHSHPGFGCWLSSVDINT 134
                 5789*********************9999999999875555588552..433444444444456899***************9887777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       761  (0.0424452); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 2851.75
//
Query:       KHJ33205.1  [L=461]
Description: putative histone deacetylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-83  280.1   0.4    4.3e-83  279.3   0.1    1.5  2  Hist_deacetyl  Histone deacetylase domain
  ------ inclusion threshold ------
       0.14   12.6   0.1        2.8    8.3   0.0    2.3  2  UvrA_DNA-bind  UvrA DNA-binding domain


Domain annotation for each model (and alignments):
>> Hist_deacetyl  Histone deacetylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  279.3   0.1   4.7e-87   4.3e-83       1     306 [.      39     329 ..      39     330 .. 0.94
   2 ?   -2.5   0.0       0.3   2.7e+03      36      54 ..     358     376 ..     353     436 .. 0.64

  Alignments for each domain:
  == domain 1  score: 279.3 bits;  conditional E-value: 4.7e-87
                    SCCGTHHHHHHHHHHHHT.THHHHCCE.EE-----HHHHTTTS-HHHHHHHHCHHHHCHHT.TTHCCHHHCCTSTSSSSSTHCTTTCCHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl   1 hpenpkRlsaileslaesvglldelelliqpseatkeellkvHskeYlelleslsnelkkkeeakekeleeiasklldddtpvspktlkaallavg 96 
                    hp++p+R++ + +sl+ ++g  +++e + ++++at++e++++H+++Y+++l++++ +  ++       ++e  + ++ dd+pv++++++ + +++g
     KHJ33205.1  39 HPMKPHRIR-LAHSLIMNYGTYHHME-IYRAKPATRHEMTQFHTDDYIDFLQKVTPDNMDHY------FKEQGKYNVGDDCPVFDGLFEFCGISAG 126
                    89*******.99********998777.6*************************998876665......222222346899**************** PP

                    HHHHHHHHHHTTSSSEEEETT.SS--TT-BTTB-BTTBSS-HHHHHHHHHHHCC-SS-EEEEE-SSS--HHHHHHCTT-TTEEEEEEEE-CCTSTT CS
                    xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl  97 avleavdavlsgsvkaafvlv.rPpgHHakaseasGFClvNnvaiaikylqakhelkrvailDvDvHhGnGteeafysdpdvltlSiHryegifyP 191
                    +++e++ ++ +g  k++++++  ++ HHak+seasGFC+vN+++++i +l + +  krv+++D+DvHhG+G+eeafy +++v+t+S+H+y++ ++P
     KHJ33205.1 127 GSMEGAARINRG--KCDIAINwAGGLHHAKKSEASGFCYVNDIVLGIIELLR-F-KKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 217
                    **********99..9***********************************99.3.36********************************966.9** PP

                    SS--TT---SGGGTTSEEEEEE-TT-BHHHHHHHHHHCHHHHHCCH--SEEEEEE-STTBTTSTT-S-BB-HHHHHHHHHHHCCCHGS-G.EEEEE CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl 192 gtgaledlgegkgkgfnlnvpleegtgdeeylkvfeeilrpvleefkPdlilvsaGfDalkgdplgelnlsvegykeltkklaeladkvkkvvlll 287
                    gtg+l d+g g+gk++++n+pl++g++de+y ++fe ++++v++ ++P++i++++G D+l+gd+lg +nls++g+++++k ++++     ++++l+
     KHJ33205.1 218 GTGELRDIGVGQGKNYSVNFPLRDGIDDETYKSIFEPVIKNVMHYYQPEAIVLQCGGDSLSGDRLGCFNLSMRGHANCVKFVKSFNI---PTLVLG 310
                    *************************************************************************************98...99**** PP

                    -S---HHHHHHHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl 288 eGGYnlealaravtavlsa 306
                    +GGY+++++ar +++ + +
     KHJ33205.1 311 GGGYTMRNVARTWAYETGV 329
                    *************998876 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.3
                    HHHHTTTS-HHHHHHHHCH CS
                    xxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl  36 keellkvHskeYlellesl 54 
                    ++ ++++ skeYl+++ + 
     KHJ33205.1 358 SSNMENANSKEYLKKITEQ 376
                    5566666777777776322 PP

>> UvrA_DNA-bind  UvrA DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.037   3.3e+02      70      97 ..     237     264 ..     223     267 .. 0.78
   2 ?    8.3   0.0   0.00031       2.8      23      73 ..     364     414 ..     350     428 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.037
                    ...............---HHHHHHHHHH CS
  UvrA_DNA-bind  70 veyksggrkrsyektfeGvipnlerryr 97 
                    +  ++g    +y+  fe vi+n+++ y+
     KHJ33205.1 237 FPLRDGIDDETYKSIFEPVIKNVMHYYQ 264
                    45555778899*************9997 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00031
                    .TT-HHHHHHHHHHHTTTS------------S-THHHHH----........ CS
  UvrA_DNA-bind  23 skkssyyrqlleavaehygidldtpfkeLpeeqkdilLyGsgeekikveyk 73 
                     ++++y +++ e+v e+++ ++ +p  +L+e  + ++L G++e++   +  
     KHJ33205.1 364 ANSKEYLKKITEQVIENLKRTTFVPSVQLTEVPRTTILGGTDEDEAIANDM 414
                    57899************************************9876655444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       687  (0.0383178); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.37
# Mc/sec: 3738.44
//
Query:       KHJ33206.1  [L=405]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-24   86.5  19.7    1.2e-19   70.7   4.6    2.9  3  PAP2_3    PAP2 superfamily


Domain annotation for each model (and alignments):
>> PAP2_3  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0     0.045   8.1e+02      40      67 ..      30      58 ..      16      64 .. 0.77
   2 !   70.7   4.6   6.7e-24   1.2e-19      15     148 ..     187     315 ..     177     322 .. 0.86
   3 !   22.4   4.6   4.6e-09   8.2e-05     151     189 ..     335     373 ..     326     374 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.045
      PAP2_3 40 hfqvtllvlvllf.lrrrerlreflttll 67
                 +++++++lvl + + rr+ ++ f t+  
  KHJ33206.1 30 EPLMVFTILVLSMfITRRKNYKIFSTSNH 58
                56777888888776888898988887755 PP

  == domain 2  score: 70.7 bits;  conditional E-value: 6.7e-24
      PAP2_3  15 eaalnk.lllahpalavilalaYaslhfqvtllvlvllf..lrrrerlreflttlllatllgllvyalfPaagPrll.eeagfvdtvaaaslagalrdg 109
                 e  +++ ++++h ++ ++l+  Ya +h++ t+ ++ + +  ++  + +  +++t+ l++ll++++++++P+++Prll +e+gf d v  ++ ++     
  KHJ33206.1 187 ENEVQQwFMQNHESFLTVLNRSYALIHIPGTVGFIGWYYyaAPSHATFATVRRTMTLTNLLAFVIFIMYPCMPPRLLpREYGFLDSVGRNNSES----- 280
                 66788977889999***********************99444455668899**************************88888888666665555..... PP

      PAP2_3 110 asravllrgtienglaafPSlHvawallvalalwrlrrk 148
                     ++++g+  n laa+PS+H+++a++++ ++++++  
  KHJ33206.1 281 ----IWMSGKYVNLLAAMPSMHFGYAFCIGCTMIYHSGV 315
                 ....9999999********************99988765 PP

  == domain 3  score: 22.4 bits;  conditional E-value: 4.6e-09
      PAP2_3 151 lrvlalllnvlmivatvatgnHYlvDviaGvalalvaia 189
                 + +l++ ++ +++++++at+nHY +D++++++++l+a++
  KHJ33206.1 335 YIALGIWYPSWILITIIATANHYYLDACVAFIVVLIAFL 373
                 6688999*****************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       894  (0.0498633); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3014.77
//
Query:       KHJ33207.1  [L=516]
Description: putative cytochrome p450 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-48  166.1   0.0    1.6e-48  165.7   0.0    1.0  1  p450      Cytochrome P450


Domain annotation for each model (and alignments):
>> p450  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.7   0.0   8.7e-53   1.6e-48       4     446 ..      53     496 ..      51     508 .. 0.82

  Alignments for each domain:
  == domain 1  score: 165.7 bits;  conditional E-value: 8.7e-53
                 ESEHHCCHCHHHHTT.TCCHHHHHHHHHHHH-.SEEEEEE.TTEEEEEEESHHHHHHHHCTSTTTTCEESSHHHHHHHHHTTTTSSSTTCGHHHHHHHH CS
        p450   4 ptplplvgnllqlgr.keelhevlrklqkkyg.pifrlkl.gskpvvvlsgpeavkevlikkgeefsgrpdeallatsrkpfkgkgvlfangekwkklR 99 
                 p+ lp++gn l + r ++el++ ++k+++ +g ++f++ + g  p vvl++p+  + vl++++  f++    ++++ ++    g+g+++a+ e wk +R
  KHJ33207.1  53 PDTLPFLGNGLVFLRdRHELFSWFVKCERLFGfETFTISFpGLPPCVVLNDPKNLEFVLKNES-LFAK---GSFFRERSWDLFGNGIINADNELWKIQR 147
                 6789*****9999998***************54888886516699*****************6.3333...46888888899***************** PP

                 HHHHHHHTSHSTT.THHHHHHHHHHHHHHHHHCCCCHCSEEETHHHHHHHHHHHHHHHHHSSHHHTTTSSHHHHHHHHHHHHHH.HHHCHHHHCCCCCH CS
        p450 100 rfltptltsfgkl.sleelveeeaedlveklrkkagesselditellskaaldvigsilFgarfdlledeklselvkaveelss.llskssvqllllfp 196
                 r  ++ l + + +      + ++ ++ v++l++  ++   +d+  ++ + ++  +g++++++++    d+ +s++ ++   + +  ++++ ++l  lf+
  KHJ33207.1 148 RAGLRFLNKANMRvLTDLALPKYLQQTVQRLESLENSI--VDLDIIFHELTTLLMGRLAYNMEIH-HSDS-FSKAFDFASGITEdRFKNPLWKLTELFS 242
                 *9888777663333455567889999999999999999..**********************988.5555.8899999999965344444433333333 PP

                 HHTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCHCHC........SCSSCSHHHHHHHHCTTCTCTSSSSHHHHHH.HHHHHHHHHHHHHHHHHHHHH CS
        p450 197 llkylptkllrklkeavkklkdlldklieerretldsa........kksrrdfldalllakkekkgesklsdeelaa.tvlellfaGvdTtsstlswaL 286
                       +k+++ + e+ k +  ++   ++++r++  s+         +s  ++++ l+         ++++de+++a  +l  l aG dTt  +l w++
  KHJ33207.1 243 -----GKKFRKAVAEI-KLFGSYIVSNVTQQRKSKGSNrqesedcfGSSSGTLINSLI---------DEIKDENVVAdAALSYLSAGRDTTGQALIWTI 326
                 .....45555555555.77777777666666666555524333333223333333333.........4577888766267899**************** PP

                 HHHHHSHHHHHHHHHHHHHHCCTTT.........T-HHHHCCT-HHHHHHHHHHHHHSCSSTTEEEEESSSCEEETT.EEE-TT-EEEEEHHHHHT-TT CS
        p450 287 yeLaknPevqeklreEidevlgdkr.........eptyddlqklpyldavikEtLRlhpvvplllpRevtkdvvirg.ylipkGtevivnlyalhrdpe 375
                 y+L+knP+ ++  r  +++ l++ +           ++   + lpyl av +E+LRl p+vpl + +e+ +++ +++  ++ k+++v  +++a++r+  
  KHJ33207.1 327 YLLMKNPDKMNTARDHVEKLLNEYKlsstdsqglDTSIFRPSALPYLVAVFHESLRLFPPVPLEI-KECQEPTILPDgTFLAKDSIVCWCIWAINRSSL 424
                 *********************999989888888888888889********************666.**********99********************* PP

                 TS.SSTTS--GGGGB-TTSCTESSCTT--TTEEGGGS-TTHHHHHHHHHHHHHHHHHHEEEEESTSTSGGEE CS
        p450 376 vf.pnPeeFdpeRFldekgnskrksfaflPFGaGpRnCiGerlArmelklflatlLqnFevelqpetdpppi 446
                 ++ +++e+F+peR+ ++++ + r+ f+f  F  GpR+C+G+ +A+  +  ++at++ +F++el +++d   +
  KHJ33207.1 425 IWgDDAETFRPERWINDEVFKPRSAFEFPVFNGGPRICLGKTMAENLVVQVIATMILQFNFELLDDSDRVSK 496
                 *******************8889***************************************9887776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (516 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       533  (0.0297284); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3642.17
//
Query:       KHJ33208.1  [L=459]
Description: putative udp-n-acetyl-glucosamine-1-p transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-33  115.2  10.7    2.8e-33  115.2  10.7    2.9  3  Glycos_transf_4  Glycosyl transferase family 4


Domain annotation for each model (and alignments):
>> Glycos_transf_4  Glycosyl transferase family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.6     0.051   9.2e+02      24      38 ..      36      50 ..      12     104 .. 0.41
   2 !  115.2  10.7   1.5e-37   2.8e-33       3     159 ..     144     317 ..     142     318 .. 0.86
   3 ?   -0.5   0.4     0.062   1.1e+03     100     133 ..     411     446 ..     376     451 .. 0.63

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.051
  Glycos_transf_4 24 karlKlilqilaali 38
                      a + + + ++aa  
       KHJ33208.1 36 FASIAFSVIAFAASY 50
                     333333332222222 PP

  == domain 2  score: 115.2 bits;  conditional E-value: 1.5e-37
  Glycos_transf_4   3 lllltillilllGflDDvlglkarlKlilqilaalililtld..lslttlglllt.....qvlielglilavlltllvivgvtNavNliDGldG 89 
                      +++l++  i++lG+ DD++++++r+K+++  +a++++++++   +++t++ +++        l++lg +++++++ ++i++  N++N+++G++G
       KHJ33208.1 144 SAILSLQSICILGIGDDLFDIRWRHKFFIPGVASIPIMIVYFvdFGVTQIVVPVPlrpylGSLLDLGFFYYIYMVAVAIFCP-NSINILAGING 236
                      5667777899**************************99998866677777776667787779********************.*********** PP

  Glycos_transf_4  90 laagvsiiialalvvla...........avdgrsellllalallgallGfllfNrypAkvFmGDsgslflGlvlavlailg 159
                      +++++s+iia++lv+             a+d++  +l+++l ++g+ l+++++N+ypA+vF+GD++ +f+G+v+a++ ilg
       KHJ33208.1 237 IEVTQSLIIAFLLVLNDcfylrgpyphpATDSHLFSLYMLLPFIGVSLALWWHNWYPARVFVGDTYCYFAGMVFAAVGILG 317
                      *********9999887799899996655555555555555666666677****************************9987 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.062
  Glycos_transf_4 100 lalvvlaavd.grsellllalallgallG.fllfNr 133
                      l+lv++   + ++ ++ +l++ l   llG f+++N+
       KHJ33208.1 411 LWLVIFGPQKeNKLAMQILVFQLFLGLLGlFVRHNC 446
                      344444422223333344444444455667888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       499  (0.027832); expected 358.6 (0.02)
Passed bias filter:                      221  (0.0123264); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 3702.60
//
Query:       KHJ33209.1  [L=375]
Description: putative amid-like mitochondrial oxidoreductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-32  112.7   0.1    3.3e-32  111.9   0.1    1.3  1  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
    3.6e-09   37.1   0.9    1.9e-08   34.7   0.1    2.2  2  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase
     0.0016   17.8   0.1     0.0031   16.8   0.1    1.5  1  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
     0.0097   15.9   0.6        4.7    7.2   0.0    3.0  3  NAD_binding_9  FAD-NAD(P)-binding
  ------ inclusion threshold ------
       0.12   11.5   0.1        1.6    7.8   0.1    2.4  2  K_oxygenase    L-lysine 6-monooxygenase (NADPH-requiring)


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.9   0.1   9.2e-36   3.3e-32       6     293 ..      15     303 ..       3     303 .. 0.84

  Alignments for each domain:
  == domain 1  score: 111.9 bits;  conditional E-value: 9.2e-36
                  E--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHH.HCHHHHHHHHHHHHH...HHHHCHHHHCCCCHCCTCEEEEESCEEEEETEEECTCEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   6 iGgGpAGlaaaltlaqagakvtlvelegtclnggcll.skallgvaedaeias...evvkklnqgielllgeevvkidpgkkkvklekkkegdeekia 99 
                  iG  ++ l+ al+ +q  ++v+lv + +t++++ +     ++ g  +d++ ++   e ++k++  +e++lg  ++++d+  k+v+++++k   e++ +
   KHJ33209.1  15 IGVTHGILKHALKNNQLDYNVVLV-SSTTHHYWNMASvRAIVPGQFSDEKLFAsipEGLQKYGDIVEFVLG-LATQLDTSTKTVTIKTDK--GERQQQ 108
                  44455556667777789*******.99999999887734444555555555558**8899***********.**************7766..5789** PP

                  ESEEEE---EEE-BCTCTTC.TTBEECCSECHHHHHHCCSS-T.....SEEEEES-SHHHHHHHHHH...HHHT-EEEEEESSSSSSTTS-HHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 100 ydklvlAtGssprdlgipGvaenvgklvrtldsaealklkllp.....krivvvGgGyiGvElAaal...aklgkevtlveardrllraldkelsaal 189
                  yd l++AtGs+++   i       +++ + ++ ++++ ++ ++     k i++ GgG++GvE+A++l     l+ke+ l+ a+++ll +  + ++ a+
   KHJ33209.1 109 YDILIIATGSRAKGKEISPW----YTSPSGYEATKEILHDFQDkvrnsKTIAIGGGGPTGVETAGELgyeYGLQKEISLITAGSKLLTSGTSGMASAA 202
                  ***********999877755....34445555555555555555667899****************876788899************9999******* PP

                  HHHHHHTTEEEEESCEEEEEEETTE.EEEEEETTSCEEEESEEEE-S-EEES-HHCSHCCT-EEEETTEEE--TTSBES.STTEEE-GGGCTECCSS- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 190 eealekeGvevklgtsvkeidgnge.klevvledgeeidadlvvvavGvrpstelleeklglelderggivvdeflrtn.vpgiyaiGDvaggkggpe 285
                   ++l+k  v++  gt+v+++++ ++ + e+ l+dg++  +dl +   G  p+t+++  ++ l  +e  ++ vd f r++   +i+a+GDv+  +  p 
   KHJ33209.1 203 DHELKKLHVNIIYGTKVTDVKPTSNgQTELLLSDGTTKTVDLYLPTLGSMPNTDFV-PEAYL--NESKYLMVDNFFRVKnASDIWAAGDVT--DLEPP 295
                  ***********************997777**************************9.66666..77***********966***********..89999 PP

                  -HHHHHHH CS
                  xxxxxxxx RF
  Pyr_redox_2 286 laqaAvqq 293
                  + + A +q
   KHJ33209.1 296 QYVYAEKQ 303
                  98888775 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1      0.27   9.5e+02       2      15 ..       5      18 ..       4      38 .. 0.81
   2 !   34.7   0.1   5.4e-12   1.9e-08       2      78 ..     155     234 ..     154     237 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.27
                EEEECSSHHHHHHH CS
   Pyr_redox  2 vvvvGgGyiglElA 15
                ++++G++y+g+ + 
  KHJ33209.1  5 ILILGASYVGIGVT 18
                89********9765 PP

  == domain 2  score: 34.7 bits;  conditional E-value: 5.4e-12
                 EEEECSSHHHHHHHHHH...HHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEECSEEEEEEEEETTSEEEEEE CS
   Pyr_redox   2 vvvvGgGyiglElAgal...aelgkkVtvversdkllrllDeeaskilqeklekngievllntkveeiegsedgvesvkl 78 
                 +++ GgG +g+E Ag+l     l+k+++++ +++kll      ++++   +l+k++++++++tkv+ ++ +++g +++ l
  KHJ33209.1 155 IAIGGGGPTGVETAGELgyeYGLQKEISLITAGSKLLTSGTSGMASAADHELKKLHVNIIYGTKVTDVKPTSNGQTELLL 234
                 7899*************9766788*************999999**************************99999555665 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   8.7e-07    0.0031     107     290 ..      89     272 ..      85     287 .. 0.71

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 8.7e-07
  Pyr_redox_3 107 vkkedegfevetske..tyeAkkviiAtGefdk.....PnklnipGeeklvkhyskvkefhkyagqkvvViG.gknSavDaAlelvrk...gaeVtvv 193
                  ++ + ++ +++t+k+  + + + +iiAtG   k     P +++ +G e +++  + +++   +++ k + iG g+ ++v++A el  +    +e++++
   KHJ33209.1  89 LDTSTKTVTIKTDKGerQQQYDILIIATGSRAKgkeisPWYTSPSGYEATKEILHDFQDK--VRNSKTIAIGgGGPTGVETAGELGYEyglQKEISLI 184
                  566778899*****944556667*****98765223336666777777667777777766..66666666651678********954444489***** PP

  Pyr_redox_3 194 trgseiekeesdpsyslkpdienrleelvkeekikvlfnaevkeikekee.eykvktedgkkvevkddvvlatGykpdlsflkkslfeldedgrpvlt 290
                  t gs++ ++       +      +l++l    ++++++ ++v+++k +++ + ++  +dg++ +  d ++  +G  p+++f+ ++ +  +e+++ +++
   KHJ33209.1 185 TAGSKLLTSG---TSGMASAADHELKKL----HVNIIYGTKVTDVKPTSNgQTELLLSDGTTKT-VDLYLPTLGSMPNTDFVPEAYL--NESKYLMVD 272
                  ****999986...456778888899887....4899*********9765516688899987644.4666777899999999975444..445555555 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.0    0.0056        20     117     155 ..      79     118 ..      59     119 .. 0.82
   2 ?   -0.8   0.3      0.37   1.3e+03       2      18 ..     157     173 ..     156     188 .. 0.78
   3 !    7.2   0.0    0.0013       4.7     114     148 ..     208     244 ..     196     251 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0056
  NAD_binding_9 117 vevhraevvdleeradgqavlladg.aslaadaVvLAlGh 155
                    ve++ + +++l+++ +++++ +++g ++ ++d +++A+G 
     KHJ33209.1  79 VEFVLGLATQLDTSTKTVTIKTDKGeRQQQYDILIIATGS 118
                    7888999***************9994567*********95 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.37
  NAD_binding_9   2 ivGaGprGlavlerLla 18 
                    i G+Gp+G+ ++ +L  
     KHJ33209.1 157 IGGGGPTGVETAGELGY 173
                    669******99988865 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0013
  NAD_binding_9 114 gvtvevh.raevvdleeradgq.avlladgaslaada 148
                    +++v+++  ++v+d++++ +gq ++ll+dg++ ++d 
     KHJ33209.1 208 KLHVNIIyGTKVTDVKPTSNGQtELLLSDGTTKTVDL 244
                    4566665367***********97899*****999986 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.1   0.00043       1.6     134     231 ..      95     193 ..      72     202 .. 0.65
   2 ?   -0.7   0.0      0.17   6.1e+02     112     319 ..     212     235 ..     202     243 .. 0.55

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00043
  K_oxygenase 134 tveskdaegeeeelearnlvlgvGtepkiPevleklegkervvHsseylerkee.llakkriaVvGsGqSaaeifedllrrqk.kvelklvtrseale 229
                  tv+ k+++g e++ +   l++++G+++k  e+   +++ +    ++e+l++ ++  +++k+ia+ G+G ++ e + +l  ++  ++e++l+t +++l 
   KHJ33209.1  95 TVTIKTDKG-ERQQQYDILIIATGSRAKGKEISPWYTSPSGYEATKEILHDFQDkVRNSKTIAIGGGGPTGVETAGELGYEYGlQKEISLITAGSKLL 191
                  444444555.4566667888999977654444444443344555566666654436788899999999999999999999855378999999888776 PP

  K_oxygenase 230 pl 231
                   +
   KHJ33209.1 192 TS 193
                  65 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.17
  K_oxygenase 112 qvrfgeeveevepdeeeeeelltveskdaegeeeelearnlvlgvGtepkiPevleklegkervvHsseylerkeellakkriaVvGsGqSaaeifed 209
                  ++ +g++v++v+p ++                                                                                  
   KHJ33209.1 212 NIIYGTKVTDVKPTSN---------------------------------------------------------------------------------- 227
                  3445555555555555.................................................................................. PP

  K_oxygenase 210 llrrqkkvelklvtrsealeplddspfvneifsPeyvdyfyslpeekreallkeqkatnykgvdaelieelyeelyeqkvkgeerlrllpnrevesae 307
                                                                                                                    
   KHJ33209.1   - --------------------------------------------------------------------------------------------------   -
                  .................................................................................................. PP

  K_oxygenase 308 aegkgeveltlr 319
                      g++el l+
   KHJ33209.1 228 ----GQTELLLS 235
                  ....44444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.37
# Mc/sec: 3054.56
//
Query:       KHJ33210.1  [L=529]
Description: putative duf895 domain membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-12   47.6  26.5    1.1e-12   47.6  26.5    1.5  1  MFS_1     Major Facilitator Superfamily
    2.6e-09   37.0   6.9    2.6e-09   37.0   6.9    2.8  3  UNC-93    Ion channel regulatory protein UNC-93


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6  26.5   1.2e-16   1.1e-12      39     351 ..     107     450 ..      70     452 .. 0.76

  Alignments for each domain:
  == domain 1  score: 47.6 bits;  conditional E-value: 1.2e-16
       MFS_1  39 tlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllll.fa....sslw.lllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagf 130
                 +ly+ ++a++ ++ G++++ +G r +l +g +++++  + ll+ ++    ss++ + +++ ++ G++a++l++a +++++ + ++ ++g +++++ a f
  KHJ33210.1 107 ALYS-TFAFFGFFSGPIINFLGIRITLAIGGVGYCVYtASLLTsVIhpdnSSVYaFNIFGGAFLGFCAALLWTAQGTIMVSYPHEHQKGHYFAWFWAIF 204
                 4444.689*****************************5555555325788889999******************************************* PP

       MFS_1 131 slGailgpllggllasslg.....Wravfyilaivsllafvlfllllpeepperkrkspkeeekgtgpaplvpawkallkdpvlwillialllfffgfs 224
                 ++Ga+lg l+  +   ++       + +++i+ ++++l+ vl+l+l  ++++ r  +s + +   + p+ +++++++  + +   + +++++lf +++s
  KHJ33210.1 205 NMGAVLGSLVPLAQNFHVTqnrtvNQNTYIIFLVLMILGSVLALCLCNAKNVVRDDNSRVIL--MKNPTVCSELIGMWETIK---FEWTVIFLFPMFWS 298
                 *******999887664444777888889**************99999999999999999888..344444444444444444...46788888888999 PP

       MFS_1 225 g..lltllplylqevlgls..glllaglllallalvgailallagrlsdr.......lgrrrrlllallllllaalglallavt............... 297
                 +  ++t+         ++s  +  l++ll+  +++++   a+++g+ +d         gr +  +l+ +  ll+ +g+++  ++               
  KHJ33210.1 299 SnwFYTYQQN-GINAAHFStrAKALNSLLYYSAQILA---AFFLGYCLDSdyksrvwRGRVNLVFLFTVTSLLWGIGYLWQRTYtrktvtdqsfsptdw 393
                 6433333333.56666666**6688888899999999...66788888777777777888888888889999999999998888888888888877755 PP

       MFS_1 298 ..ssavllllvlvliGfglgfvfpsllalasdla.ppeeagtasglfntagslggal 351
                    +++  l++++++G   ++ ++s+  ++  l  + ++ + ++g++  ++s+g+a+
  KHJ33210.1 394 ksPNYAGPLILYICYGAYDALWQASVYWYMGALSnSGRRIANYIGFYKGLQSAGSAV 450
                 544444444455555555555433332222222223377888888888888888775 PP

>> UNC-93  Ion channel regulatory protein UNC-93
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   6.9   2.9e-13   2.6e-09      46     144 ..     108     214 ..     103     231 .. 0.84
   2 ?   -0.5   0.4     0.099   8.9e+02      23      72 ..     310     359 ..     288     379 .. 0.67
   3 ?   -3.2   0.1      0.66   5.9e+03     128     148 ..     466     486 ..     443     492 .. 0.54

  Alignments for each domain:
  == domain 1  score: 37.0 bits;  conditional E-value: 2.9e-13
      UNC-93  46 iyavftvanlvapsvvdlltakwalvigallyaifqlgFlll....nkyyly....issallGvgaallwtgqGsyLsenstretiernssilwallks 136
                 +y++f+++ +++ +++++l+ +++l ig++ y +++++ l       + ++y    ++ a+lG+ aallwt+qG+ +++  ++++ ++  + +wa++++
  KHJ33210.1 108 LYSTFAFFGFFSGPIINFLGIRITLAIGGVGYCVYTASLLTSvihpDNSSVYafniFGGAFLGFCAALLWTAQGTIMVSYPHEHQKGHYFAWFWAIFNM 206
                 79**********************************9998642222333333224489***************************************** PP

      UNC-93 137 slliGgif 144
                   ++G+++
  KHJ33210.1 207 GAVLGSLV 214
                 99999876 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.099
      UNC-93  23 ieslaekspgkiekkaGYyslaiiyavftvanlvapsvvdlltakwalvi 72 
                 i++++ ++++k  +   Yys+ i+ a+f   +l + +  ++  +++ lv+
  KHJ33210.1 310 INAAHFSTRAKALNSLLYYSAQILAAFFLGYCLDSDYKSRVWRGRVNLVF 359
                 66666666666666667888888888888888876666666666655554 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 0.66
      UNC-93 128 silwallksslliGgiflilv 148
                 +  ++ll+ slli + ++++ 
  KHJ33210.1 466 ASNFGLLSGSLLIAAPMIFFK 486
                 344566666777777666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (529 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       853  (0.0475766); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.45
# Mc/sec: 3517.31
//
Query:       KHJ33211.1  [L=125]
Description: putative endothelin-converting enzyme 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.7e-05   23.3   0.0    0.00011   22.7   0.0    1.3  1  Methyltransf_11  Methyltransferase domain
  ------ inclusion threshold ------
      0.037   14.7   0.0      0.075   13.7   0.0    1.6  1  Methyltransf_25  Methyltransferase domain
       0.17   11.7   0.2        1.4    8.7   0.2    2.0  1  Methyltransf_8   Hypothetical methyltransferase


Domain annotation for each model (and alignments):
>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   1.9e-08   0.00011      39      93 ..       6      71 ..       1      74 [. 0.81

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 1.9e-08
                     CHHT-EEEETTEECCCTSS-TT-EEEEEEES-CCC-.C............CHHHHHHHHHHHEEEEEE CS
  Methyltransf_11 39 seeglkvefvvadaeklpfednsfDlvvssevlhhv.e............dpekalkeiaRvLkpgGl 93
                     s    + e+ v+d+++l +ed+s+D+ + + +l+ + +            ++  ++++i+RvLk gG+
       KHJ33211.1  6 SSL--ETEWSVMDVRELDLEDESVDFAIDKGTLDAFlHgslwdppedvakNVGLYVDQIMRVLKLGGK 71
                     333..4789**********************99999834555666666669999*************7 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.3e-05     0.075      40      97 .]       4      70 ..       1      70 [. 0.66

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.3e-05
                     HHHHTTTTEEEEESBCCGBSSSTTTEEEEEEESTGG.......GSSHHHHHH....HHHHHHHHEEEEE CS
  Methyltransf_25 40 raeeeglnvefvqgdaedlpfedgsfDlvvssgalh.......hlsdedlek....alkeiarvLkpgG 97
                     ++  ++l+ e+ ++d+++l++ed+s+D+ +  g+l        + ++ed++k    ++++i rvLk gG
       KHJ33211.1  4 KY--SSLETEWSVMDVRELDLEDESVDFAIDKGTLDaflhgslWDPPEDVAKnvglYVDQIMRVLKLGG 70
                     44..45789*********************966666333343211223333344547777788887776 PP

>> Methyltransf_8  Hypothetical methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.2   0.00023       1.4     105     154 ..       9      72 ..       4      91 .. 0.67

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00023
                     STTEEES-TTS-S--TT-EEEEE........EES--......-SS-HHHHHHHHHHHEEEEEEE CS
  Methyltransf_8 105 nervvacdlakvPledesvdvav........fclsl......mgtnladflkeanrvlkvGGll 154
                     + +  + d++++ ledesvd a+        +  sl      +++n+  ++ ++ rvlk GG +
      KHJ33211.1   9 ETEWSVMDVRELDLEDESVDFAIdkgtldafLHGSLwdppedVAKNVGLYVDQIMRVLKLGGKW 72 
                     5666788999999999999999833222211112333333333566677788888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       353  (0.0196888); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 928.68
//
Query:       KHJ33212.1  [L=192]
Description: putative arp2 3 complex 21 kda subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-72  242.4   0.0    3.2e-72  242.2   0.0    1.0  1  P21-Arc   ARP2/3 complex ARPC3 (21 kDa) subunit


Domain annotation for each model (and alignments):
>> P21-Arc  ARP2/3 complex ARPC3 (21 kDa) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.2   0.0   1.8e-76   3.2e-72       1     174 []       1     192 []       1     192 [] 0.97

  Alignments for each domain:
  == domain 1  score: 242.2 bits;  conditional E-value: 1.8e-76
     P21-Arc   1 mpayhssfneee...evrlvgnlallplktkvrgpapka.............deeeediidealelFranvlfrnfeikgeaDrvLiYlilfisecLkk 83 
                 mpay+s fne++   +++++g+++llpl+t+vrgpa +              ++e++d++de+l+lFran++frnfei+g+aDr+L+Y+il+isecL+k
  KHJ33212.1   1 MPAYNSIFNEDSshqTTQNIGKFPLLPLRTRVRGPAFTLplcdlpahlspdpNDESYDVLDEVLSLFRANTFFRNFEIQGPADRLLVYGILWISECLSK 99 
                 9********9943447899******************999***********999********************************************* PP

     P21-Arc  84 lkkstskeeaekelatlale.nfaiPgdagfpLnslyekpkskeeadllrqYlkqlrqelalrllervyedd.ekpskwWlafakrkFmnksL 174
                 ++ s++ +ea+ke++++al+ nf+iPgd++fpLn+l+++p+s +ea++lrqYl qlrqela rll+r+y+++ +kpskwWl+f+krkFm+ksL
  KHJ33212.1 100 IRGSMNVREAQKEIQNIALDvNFSIPGDPSFPLNQLFNSPSSPQEAETLRQYLCQLRQELASRLLARIYAEGpDKPSKWWLSFSKRKFMGKSL 192
                 ********************9************************************************99889*****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       452  (0.0252106); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.28s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1382.43
//
Query:       KHJ33213.1  [L=678]
Description: hypothetical protein EV44_g1942 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      0.005   16.7   9.0      0.066   13.1   0.5    3.7  3  Shugoshin_N  Shugoshin N-terminal coiled-coil region
  ------ inclusion threshold ------
       0.31   11.6   3.7       0.65   10.6   2.8    2.1  1  LsmAD        LsmAD domain
        4.7    7.6  10.5         33    4.9   0.9    4.2  3  TSC22        TSC-22/dip/bun family
        7.5    6.3  21.6      0.031   14.1   7.7    2.7  2  DUF724       Protein of unknown function (DUF724)


Domain annotation for each model (and alignments):
>> Shugoshin_N  Shugoshin N-terminal coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.5   1.5e-05     0.066      22      41 ..      22      41 ..      21      43 .. 0.93
   2 !    6.4   0.1    0.0018         8      20      36 ..      52      68 ..      52      69 .. 0.95
   3 ?   -0.3   0.3      0.22   9.8e+02      18      42 ..     117     141 ..     115     143 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.5e-05
  Shugoshin_N 22 kirelekevseLlsENlnLR 41
                 k++ele+++ +L++ N++L 
   KHJ33213.1 22 KVKELENTNQQLIYDNVSLQ 41
                 89****************95 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0018
  Shugoshin_N 20 slkirelekevseLlsE 36
                 s+ki++le + s+L +E
   KHJ33213.1 52 SQKISDLEDKASRLERE 68
                 79************998 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.22
  Shugoshin_N  18 alslkirelekevseLlsENlnLRe 42 
                  als+++ e e+ +s  ++EN  LR+
   KHJ33213.1 117 ALSAQVVENETQLSAKIKENHLLRS 141
                  6888888889999988999999998 PP

>> LsmAD  LsmAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   2.8   0.00014      0.65      12      64 ..      44      95 ..      34     101 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00014
       LsmAD 12 YTtkldksspeykereaeAeriArEIessastnahvaeerglkvddsgldEEd 64
                Y  +l++ss++ ++ e +A+r++rE +s+  +  +v+ee + + d+  +  E+
  KHJ33213.1 44 YKNSLEESSQKISDLEDKASRLERESKSQGLELCRVQEEYNITNDHL-EQKEK 95
                8889*************************************954433.44444 PP

>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.9    0.0074        33      21      44 ..      21      44 ..      15      54 .. 0.84
   2 ?    4.8   0.2    0.0081        36      21      37 ..      53      69 ..      45      72 .. 0.88
   3 ?    1.4   0.7     0.089     4e+02      15      43 ..     114     142 ..     112     155 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0074
       TSC22 21 ekIkeLeernseleeENslLkala 44
                +k+keLe++n++l ++N  L+a  
  KHJ33213.1 21 KKVKELENTNQQLIYDNVSLQAEY 44
                589**************9998765 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0081
       TSC22 21 ekIkeLeernseleeEN 37
                +kI +Le++ s+le+E 
  KHJ33213.1 53 QKISDLEDKASRLERES 69
                79*************96 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.089
       TSC22  15 eVevLkekIkeLeernseleeENslLkal 43 
                 e+  L  +++e e + s+  +EN+lL+++
  KHJ33213.1 114 EITALSAQVVENETQLSAKIKENHLLRSH 142
                 566778888999999999999*****976 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   7.7     7e-06     0.031     106     186 ..      21     102 ..      14     104 .. 0.84
   2 ?   -2.7   6.1      0.98   4.4e+03     124     171 ..     107     176 ..     101     182 .. 0.46

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 7e-06
      DUF724 106 klleerkklekk.ieeeesekrkleeeidelekkilelerqlallkekkeaadkeiarlkseaekleeeledveqeFeavas 186
                 k+ +e+++ +++ i ++ s +++++++++e ++ki++le ++ +l ++ +++  e++r++ e +  +++le+ e++F ++as
  KHJ33213.1  21 KKVKELENTNQQlIYDNVSLQAEYKNSLEESSQKISDLEDKASRLERESKSQGLELCRVQEEYNITNDHLEQKEKQFTELAS 102
                 44455555555515566667789999****************************************************9998 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.98
      DUF724 124 ekrkleeeidelekkilelerqlallk.......................ekkeaadkeiarlkseaekle 171
                 +k + ++ei  l+ +++e e+ql + k                       + + +++++i++  +++++++
  KHJ33213.1 107 DKIRHKKEITALSAQVVENETQLSA-KikenhllrshnkllaingqsrqnKSQVTNQSQICKNDVKERSID 176
                 3444444555555555555555432.223444444555555555533333344455555555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (678 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2144  (0.119583); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.75u 0.28s 00:00:01.03 Elapsed: 00:00:00.44
# Mc/sec: 4582.96
//
Query:       KHJ33214.1  [L=503]
Description: putative alanine aminotransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.2e-43  147.4   0.0      8e-43  147.0   0.0    1.1  1  Aminotran_1_2    Aminotransferase class I and II
  ------ inclusion threshold ------
      0.094   12.0   0.0       0.14   11.4   0.0    1.2  1  Beta_elim_lyase  Beta-eliminating lyase
       0.11   11.0   0.0       0.17   10.4   0.0    1.2  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.0   0.0   1.3e-46     8e-43      30     349 ..     125     482 ..     110     486 .. 0.89

  Alignments for each domain:
  == domain 1  score: 147.0 bits;  conditional E-value: 1.3e-46
                    HHHHHTSTTST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEEESS-THHHHHHHHTTSEEEEEEBEET CS
  Aminotran_1_2  30 galaggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgdeilvpdptyasyknilrlsggevvryplyse 125
                     + a g++  y+ + g pe+++ +a fl r+ + + +++  + ++sGa+++ + l  +++  p + +lvp p y+ y+  l l g+ + +y l+++
     KHJ33214.1 125 LLKAVGSVGAYTASNGIPEVRQSIANFLERRDGYPADPK-DIYLSSGASSAVNNLLNIICDKPTTGVLVPIPQYPLYTATLSLLGARLAPYYLDES 219
                    567889999******************************.********99999999999899********************************** PP

                    TTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTTTCBSSSS..HTHHH.......HGGSTTSTT CS
  Aminotran_1_2 126 edfhldlealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsl..davat.......ranveeepn 212
                    ++++ dlea++ a+kea+e+   ++ i++ +p NPtG+ ++ e++++++d+a k++l+++ De+Y++ vf+ +  ++ ++       +++  + ++
     KHJ33214.1 220 KGWGTDLEAIKGAYKEATENGTDVRAIVIINPGNPTGASLSMEDIRAVIDFAAKKKLVVMADEVYQTNVFKGKfySFKRVlrdlqkqHPGTYDNVE 315
                    ***********************************************************************8766666668777766666666667 PP

                    EEEEEESSSTT.SSGGG-EEE..EEE.EHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHH........HHHHHHHHHHHHHHHHHHHHHHS. CS
  Aminotran_1_2 213 llivgslsKaf.GlaGeRvGy..ilg.naavvsqlrklsrpflsssllqaavaaalsdallkqs........eleemrqrlqkrrkelrdeLael. 295
                    l+ + s+sK + G  G R Gy  ++g ++av +q+ kl++  l + ++++ +++++ ++++k s        e e+    l+k++  l++++++  
     KHJ33214.1 316 LASLHSVSKGMvGECGQRGGYfeLVGfDPAVQQQIYKLVSITLCPPATAQCLVEMMVNPPQKGSpsyelyetEYENIFNSLKKKAYALYEAFKQMe 411
                    ***********9*********44466788***************888888888888888888888*****9999******************999* PP

                    TEEEECCSCSSEEEEEETHH....CHHHHHHH............HHHTCTEEEEEGGGGTS...TTEEEEEC.T CS
  Aminotran_1_2 296 glkvlasqsgmflltdlsae....takelskk............Lleevgvyvtpgtsftv...pgrlRitv.A 349
                    g+++ ++q+ m+l+  ++      +a +                Lle  g+ v+pg+ f+    + ++R t+ A
     KHJ33214.1 412 GVECDEPQGSMYLFPTINLPpkaiEAAK---LqgrtpdnfyairLLEATGICVVPGSGFGQkegTLHFRTTFlA 482
                    ***********99988776664663333...2444777777779****************98666678888765 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.4e-05      0.14     109     167 ..     224     281 ..     178     283 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.4e-05
                      E-HHHHHHHS--S-TTS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEE CS
  Beta_elim_lyase 109 mdlekleaaikevgaheekiklisltvTnntagGqvvsleelrevaaiakkygiplhlD 167
                       dle+++ a ke  +   ++++i++ +  n   G  +s+e +r+v ++a k+++ ++ D
       KHJ33214.1 224 TDLEAIKGAYKEATENGTDVRAIVIINPGNP-TGASLSMEDIRAVIDFAAKKKLVVMAD 281
                      5899999999997777888999999888884.8************************99 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   2.8e-05      0.17      97     181 ..     196     289 ..     162     292 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 2.8e-05
                      ESTSSHHHHHHHHHTHHHTTCEEEEESTTSHHHHHHHCCT......TEEEEEEESS-TTT...T----HHHHHHHHHHTT-EEEEEGTTTHTTT CS
  Cys_Met_Meta_PP  97 sddlYggtqrllkkvlkklgievkfvdtsdleelekaike......ntklvylEtptnpl...lkvvDiekiaklakkagvlvvvDntfaspll 181
                      +  lY  t +ll   l    ++ +    +dle+++ a ke       ++++ +  p+np+   l++ Di++++++a k++++v+ D ++ + ++
       KHJ33214.1 196 QYPLYTATLSLLGARLAPYYLDESKGWGTDLEAIKGAYKEatengtDVRAIVIINPGNPTgasLSMEDIRAVIDFAAKKKLVVMADEVYQTNVF 289
                      4567777777777777777777766666777777766666333333457899999999975558899********************9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (503 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       481  (0.026828); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 3735.37
//
Query:       KHJ33215.1  [L=460]
Description: putative 2-oxoisovalerate dehydrogenase subunit alpha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-86  289.9   0.0    2.2e-86  289.5   0.0    1.1  1  E1_dh           Dehydrogenase E1 component
    0.00097   18.9   0.1      0.005   16.6   0.1    2.2  1  TPP_enzyme_C    Thiamine pyrophosphate enzyme, C-terminal TPP
  ------ inclusion threshold ------
       0.09   11.6   0.0       0.13   11.0   0.0    1.2  1  XFP_N           XFP N-terminal domain
       0.11   11.6   0.0       0.29   10.3   0.0    1.8  1  DXP_synthase_N  1-deoxy-D-xylulose-5-phosphate synthase


Domain annotation for each model (and alignments):
>> E1_dh  Dehydrogenase E1 component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  289.5   0.0   4.8e-90   2.2e-86       4     298 ..     107     409 ..     104     411 .. 0.96

  Alignments for each domain:
  == domain 1  score: 289.5 bits;  conditional E-value: 4.8e-90
                 HHHHHHHHHHHHHHHTTSS-S-----TT-HHHHHHHHHTS-TTSEEEESS--HHHHHHTT--HHHHHHHHTT-TTTSSGTT-..-E..BTT..BEEE-S CS
       E1_dh   4 vllrrvedaldalykrkkrigfyhlsagqealkvgiaaalekeDliiteYReagvllarglsleeilaeltgkvkgkggsrh.elmyaekesrilggng 101
                 ++   ++d ++ +++r++ri+fy+++ g+e + vg+a  lekeD+i+++YRe gvl  rg s+ee++++l  ++k++g +r  +++y+++  +i ++++
  KHJ33215.1 107 MIEISIMDTIMFDAQRQGRISFYITCHGEEGISVGSASVLEKEDVIFSQYRESGVLKQRGFSIEEFMSQLFANRKDSGRGRNmPVHYGSRALNIHTISS 205
                 5566799******************************************************************************************** PP

                 STTTHHHHHHHHHHHHH......HHTS---EEEEEEGGGTT-HHHHHHHHHHHHTT--EEEEEEEESEETTEEHHHH-S---GGG..TTTTS-EEEEET CS
       E1_dh 102 ivgaqvplvaGialaak......iegkkevailliGDgAanqGdvyealnlaalwklpvifvveNNkygisTeaekasaskeladrargvgipglrVdg 194
                 ++++q p++aG+a+a k       +   +v+++++G+gAa++Gd+++aln+aa+ ++pv+f+++NN+y+isT++ ++++ + +a r+  +gi  +rVdg
  KHJ33215.1 206 PLATQIPHAAGAAYALKmqrlidPNIPPRVVVCYFGEGAASEGDFHAALNIAATRSCPVLFICRNNGYAISTPTLEQYRGDGIASRGISYGIETIRVDG 304
                 *****************666655556789********************************************************************** PP

                 TSHHHHHHHHHHHHHHHHTTT.--EEEEEEE--SS-SSTTSHSHSSSHHHHHHHHHHHH-HHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHHHHHH CS
       E1_dh 195 nDplavyeAvkfAaeraregk.gpllielvtYRyggHsesDdpstyrtreeveevrkkkdpiqrlkelLvkkgvvseeelkeiekevrkeveeavkkae 292
                 nD++av+e++  A++ a + + +p+lie+++YR+ +Hs+sDd+ +yr+r eve+++  ++pi+rl+++L k+g++++e++++ + +++ke+  a+++ae
  KHJ33215.1 305 NDVVAVREVTARARNLALKDNcRPILIEAMSYRVSHHSTSDDSFAYRARVEVEDWKLRDNPITRLRKYLEKRGIWNDEQEENTRIRLKKEILTAFARAE 403
                 *****************886659**************************************************************************** PP

                 HS---- CS
       E1_dh 293 skkele 298
                 ++k++ 
  KHJ33215.1 404 EEKKPS 409
                 **9986 PP

>> TPP_enzyme_C  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   1.1e-06     0.005      24      91 ..     201     280 ..     186     333 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.1e-06
                   ETTTS-TTTHHHHHHHHHHH..........STTSEEEEEEEHHHHHHT..GGGHHHHHHTT-SEEEEEEE-SBCCCHHHH CS
  TPP_enzyme_C  24 sgglgtmGyglpaAiGakla..........kpdrevvaivGDGgflmi..lqelatavrrnlpitvvvlnNegygmtggq 91 
                   +++ + +  ++p A Ga+ a           p r vv++ G G+      + +l  a+ r  p+++++ nN++   t   
    KHJ33215.1 201 HTISSPLATQIPHAAGAAYAlkmqrlidpnIPPRVVVCYFGEGAASEGdfHAALNIAATRSCPVLFICRNNGYAISTPTL 280
                   4466666677777777776434446674433569**********987774688888888888*********987655554 PP

>> XFP_N  XFP N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0     3e-05      0.13     156     252 ..     231     322 ..     203     341 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3e-05
       XFP_N 156 nPdlivacvvGdGeaetGPlatswhsnkflnPaedGavlPilelnGykisnptilarisdeelkklfeGlGyepafvededteslhkllaevldkav 252
                  P  +v+c  G+G a  G     +h+   +  +++  vl i   nGy is pt+  +   + + +    +G e+  v+++d  +++++ a   + a+
  KHJ33215.1 231 IPPRVVVCYFGEGAASEGD----FHAALNIAATRSCPVLFICRNNGYAISTPTL-EQYRGDGIASRGISYGIETIRVDGNDVVAVREVTARARNLAL 322
                 47889**********9996....677788999*********************7.556777888888889999999999999999988887766655 PP

>> DXP_synthase_N  1-deoxy-D-xylulose-5-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   6.4e-05      0.29     114     178 ..     208     278 ..     201     335 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 6.4e-05
  DXP_synthase_N 114 stsisaalGlavardlkge......kkkvvaviGDgaltgGmafealnnigelkkkllvilNdNemsiskn 178
                     +t i  a G a a +++         + vv+  G+ga + G  + aln +++ +  +l i  +N  +is++
      KHJ33215.1 208 ATQIPHAAGAAYALKMQRLidpnipPRVVVCYFGEGAASEGDFHAALNIAATRSCPVLFICRNNGYAISTP 278
                     5788889999999887774344444599*************************************999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (460 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       519  (0.0289475); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3361.39
//
Query:       KHJ33216.1  [L=1278]
Description: putative patched sphingolipid transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-81  272.4   6.2    3.3e-81  272.4   6.2    1.6  2  NPC1_N          Niemann-Pick C1 N terminus
    6.4e-76  256.1  16.7    1.5e-75  254.8  16.5    1.5  1  Patched         Patched family
    9.2e-50  168.4   9.2    9.2e-50  168.4   9.2    2.9  2  Sterol-sensing  Sterol-sensing domain of SREBP cleavage-activ
    2.1e-06   27.7   1.1    4.6e-06   26.6   1.1    1.5  1  Folate_rec      Folate receptor family
    0.00033   19.7   9.1    0.00033   19.7   9.1    2.3  2  MMPL            MMPL family
  ------ inclusion threshold ------
      0.019   12.6  10.9      0.036   11.7  10.9    1.4  1  ACR_tran        AcrB/AcrD/AcrF family


Domain annotation for each model (and alignments):
>> NPC1_N  Niemann-Pick C1 N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  272.4   6.2   1.1e-84   3.3e-81       2     244 .]      29     263 ..      28     263 .. 0.96
   2 ?   -2.8   0.1       1.2   3.6e+03      82     122 ..     897     937 ..     894     953 .. 0.74

  Alignments for each domain:
  == domain 1  score: 272.4 bits;  conditional E-value: 1.1e-84
      NPC1_N   2 grCalygeCgkksifgkelpcpyngpakelseearelLkelCpelfkeetkvCCdeeqletLkknlklaeellsrCpaClknflnlfCeftCspdqskF 100
                 grC ++g+Cg + +f+  lpc++ng ak+++ ++r+ L+elC+ +++ +++vCCde+q++tL++nl++a++++s+CpaC++nf+nlfC+ftCsp+qs F
  KHJ33216.1  29 GRCSIRGNCGGEGFFSPPLPCVDNGLAKKPTPSFRSSLVELCGPKWS-TGYVCCDEDQINTLSQNLDKAKSFISTCPACKENFYNLFCTFTCSPNQSLF 126
                 89********************************************9.*************************************************** PP

      NPC1_N 101 lnvtktekkkeekeavkevdyliseefaekfydSCkdvkfpatngkamdlicGgaakknaqkwlkflgdekanggsPfqinfklseeeeeeeegmepln 199
                 +nvt++e+   +k+ v+e+d+li+ e+++++++SCk+vkf+atn++amd+i+Gga  kn++++l+flg+++++ gsPfqinf+  e++++ e++m pl 
  KHJ33216.1 127 INVTDAES-YGSKHRVTELDQLITGEYGSGLFESCKNVKFGATNTNAMDFIGGGA--KNYTELLSFLGKKNPLFGSPFQINFP--EPNKYLEKDMMPLP 220
                 ******95.55899*****************************************..***************99*********..799*********** PP

      NPC1_N 200 eetlkCnesldessaCsCvDCeesCpakpelpelkesfkvggldg 244
                 ++++kC  ++de+++C+C+DC+++Cpa +e+p+ + s+++g+l++
  KHJ33216.1 221 MAPRKCY-DEDEKFRCACIDCPSVCPALTEIPPSR-SCHIGRLPC 263
                 *******.99***************7666666554.6*****998 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.2
      NPC1_N  82 knflnlfCeftCspdqskFlnvtktekkkeekeavkevdyl 122
                 +n  + +C+   s +q++ +n+ + e+k+ +++++ ++ + 
  KHJ33216.1 897 RNHQQQLCSRFTSCEQNSLTNILEQERKRPDTSYIASTTAS 937
                 67778888888888899999999888877777777776554 PP

>> Patched  Patched family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  254.8  16.5   5.1e-79   1.5e-75     159     809 ..     529    1241 ..     499    1242 .. 0.80

  Alignments for each domain:
  == domain 1  score: 254.8 bits;  conditional E-value: 5.1e-79
     Patched  159 aivlqyflkldeee.veelskeyerelek.llkdkyase..hievsilhsqiledelqrnaktllpflvvtiaiLlvfsiivsvvlssd......al 245 
                  +i  ++ ++ ++    +e + ++e++l + ll+ +++     + +s+ ++ +le+el++  +t +  +v++ +i+l+++++   + + +      + 
  KHJ33216.1  529 IITTWIVTNHPQGSlDNEKAMDWEESLRSsLLEFQEEALsrGLRLSFSTEISLEQELNKSTNTDARIIVLSYIIMLIYASLALGSPALSprsiinNP 625 
                  555566666555441567889999999761455444433448*************************************999874444433455577 PP

     Patched  246 kidwvrskpilailgvlspvlAivsslGlllwlGfrfns.ivtvtPFLvLaiGvDdmflmvaawkrteakls...vkkrigealseagvaitiTslT 338 
                   +  v +k  + i+g+l  +++i++s+Gl ++ G++    i  v+PF+vLa+GvD++fl+v++++ ++ +++   v+ ri+++l   g++i+   +T
  KHJ33216.1  626 AKTIVEMKLTIGIVGILIVLMSISASVGLFSFAGVKVTLiIAEVIPFIVLAVGVDNIFLIVHEFDCVNISHTdalVEDRIARTLGRIGPSILFSAIT 722 
                  899********************************99861568**********************9999999999********************** PP

     Patched  339 dvlsFgiGaittlpaiqlFciytavailfdfiYqitffaavlaiaakaeaegrhsllliiekeespsklqeiesessekdddkskeaeelkskffre 435 
                  + + F +Ga   +pa++ F+iy+a a++++ i q+t+f ++la+ +++  ++r  ++++i  + +  +lq  ++ + + +     + e+l ++f+r+
  KHJ33216.1  723 ETFIFSLGAFVGMPAVKNFAIYAAGAVFINAILQVTMFVSILALNQRRTEDNRADCFPCIRIKSAGIQLQDSSDLHNVSSRPYDCQDESLLRQFIRK 819 
                  ***********************************************************997777777777766665553334555556999***** PP

     Patched  436 iyapfllnksvrlvvlllfvvylaiaiyGcvnikegLepkklvledsplvevlkliekeiwkeg.......lqvevvvnNppd.l...tikesrdrl 521 
                  iy+p +l+k+ +l++++ f+  ++  i  + ++  gL+   ++  ds+lv+++++i  + ++ g        q++v   N    l   +++ ++++l
  KHJ33216.1  820 IYTPSILKKKAKLAIIFGFLSIFSAGIALIPEVSLGLDQRDALPRDSYLVPYFSDI-YQYFNSGppvyfvsRQLNVTKRNHQQqLcsrFTSCEQNSL 915 
                  *********************999999999**************************.5555666111111145555555533212111123333444 PP

     Patched  522 eelveefentpy.algkkstkfwlreyekflkqseleveeledeee...........................ewskeelesflkaaenslwkkdlv 590 
                   +++e+  + p  +     t  w+ +y  +l    l+   +e  ++                           +w+ +  ++     ++  +++ + 
  KHJ33216.1  916 TNILEQERKRPDtSYIASTTASWIDDYFLWLDP-SLDSCCVESGKTcfknrsppwnitlfgmpeggefihylrKWIAAPTNEDCPLGGKAAYSSSVI 1011
                  4444444444441444567889*******9988.566666666666789999***********9976666665556666666666666667777777 PP

     Patched  591 wdnesdeettelkkfrftla.lkdlseptdrtkllkelRsiadkeselnvtvfdedaafadqlltilpstiqnivlallcmfvvallfipelitvlv 686 
                  +d   +++t   ++fr     l+  +++ +  ++ +++ +  +ke+++nv  +   + f dq+ ti +   + +  a++++f+++ +++ ++ t++v
  KHJ33216.1 1012 ID--VEKKTILASQFRSSHTpLRSQKDFIEAYSSSRRIAELISKENNINVFPYSVFYIFFDQYSTIVSLSTTLLGYAFVLIFLISSILLGSFQTAFV 1106
                  77..5555555666776555455555666656666666666678888************************************************** PP

     Patched  687 itlsivsidigviGflslWgvdLDpismitiimsiGfsvdlsaHiayafvrsekd..........dakeRvvealealgwPvvqgalST.ilgvlvL 772 
                  +t++++ i + +iG +++  + L +is++++i+++G  v++ aHia af+  + +          d ++R+  al  +g  v+ g + T +lgv vL
  KHJ33216.1 1107 VTFTVIMIVVDIIGTMAIFNISLNAISLVNLIICVGIGVEFCAHIARAFMFPSRSiieqaknkfrDRDARAWTALVGVGGSVFSGITVTkLLGVTVL 1203
                  **********************************************99974433334444557899999****************9988578***** PP

     Patched  773 lfvdsymvqvFfktvvLv.vvigllHgLlilPillslf 809 
                  +f  s +  ++   ++L  v++  +H+L++lP++lslf
  KHJ33216.1 1204 AFTRSKIFDIYYFRIWLAlVLFAGIHALIFLPVVLSLF 1241
                  **********98888886255688************98 PP

>> Sterol-sensing  Sterol-sensing domain of SREBP cleavage-activation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.4   9.2   3.1e-53   9.2e-50       2     152 ..     630     783 ..     629     784 .. 0.97
   2 ?   -6.7  11.3         6   1.8e+04       9      63 ..    1104    1157 ..    1098    1226 .. 0.77

  Alignments for each domain:
  == domain 1  score: 168.4 bits;  conditional E-value: 3.1e-53
                     HHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHCHHHHHHHHTTTCH...HHHHHHHHHHHCCCCHHCCCHHH CS
  Sterol-sensing   2 vkskfgLglagviivllsvasslgllaylgltltliilevlPflvlavgvdnifvlvkavqrtsrslde...seriaealgevgpsilltsltel 93 
                     v+ k+++g++g++ivl+s+ +s+gl+++ g+++tlii+ev+Pf+vlavgvdnif++v++++ ++ s+++   ++ria++lg++gpsil +++te+
      KHJ33216.1 630 VEMKLTIGIVGILIVLMSISASVGLFSFAGVKVTLIIAEVIPFIVLAVGVDNIFLIVHEFDCVNISHTDalvEDRIARTLGRIGPSILFSAITET 724
                     789*********************************************************998888877778*********************** PP

                     HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTXXTTTXXXX CS
  Sterol-sensing  94 lalllgaltdvpavqeFclfaavavlvdFllqitfFvavLsldirreeserldvlcclk 152
                     +++ lga++ +pav++F+++aa av+++ +lq+t+Fv++L+l++rr+e++r+d+++c++
      KHJ33216.1 725 FIFSLGAFVGMPAVKNFAIYAAGAVFINAILQVTMFVSILALNQRRTEDNRADCFPCIR 783
                     *********************************************************97 PP

  == domain 2  score: -6.7 bits;  conditional E-value: 6
                      HHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHCHHHHHH CS
  Sterol-sensing    9 glagviivllsvasslgllaylgltltliilevlPflvlavgvdnifvlvkavqr 63  
                      +++ +++v++ v+  +g +a+++++l+ i+l v   + + +gv+    + +a+  
      KHJ33216.1 1104 AFVVTFTVIMIVVDIIGTMAIFNISLNAISL-VNLIICVGIGVEFCAHIARAFMF 1157
                      788899999999999**************99.99899999999977777777654 PP

>> Folate_rec  Folate receptor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   1.1   1.5e-09   4.6e-06       2     117 ..      49     170 ..      48     181 .. 0.81

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 1.5e-09
                 EESS.SSSESSXBSBSTGGGGGGG.GTTS.BSSBHHHHHHTTSSSXTTTSS.TTTTSCXXHHHHHHHHHHHHHHHHXSCCGGGEEE......TCCEEEX CS
  Folate_rec   2 Cleg.kkhkelpspeeklleeCsp.yken.sCCtsetseelssdesilanfrwerCgelsqeCekfleqlecfyecsphlglwikp......erkeril 91 
                 C+++   +k++ps  + l e+C p +++   CC ++++++ls++  + ++f      +  ++C++ + +l c + csp+++l+i+        +k+r++
  KHJ33216.1  49 CVDNgLAKKPTPSFRSSLVELCGPkWSTGyVCCDEDQINTLSQNLDKAKSF-----ISTCPACKENFYNLFCTFTCSPNQSLFINVtdaesyGSKHRVT 142
                 6555235678888889999999753887768***********999887766.....57779**********************7777789996666666 PP

                 SEE..EXHHHHHHHHHHTTTSEES.S.T CS
  Folate_rec  92 kvp..LCeelCdawfeaCkedltcssnw 117
                 ++   +  e+   +fe+Ck+  + ++n+
  KHJ33216.1 143 ELDqlITGEYGSGLFESCKNVKFGATNT 170
                 66555999***********988776654 PP

>> MMPL  MMPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   9.1   1.1e-07   0.00033     171     305 ..     638     770 ..     629     778 .. 0.81
   2 ?    2.9  12.7     0.015        44     149     306 ..    1083    1245 ..    1067    1263 .. 0.77

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 1.1e-07
        MMPL 171 llplltvvvsllaalglvlilalllglelstfvlgllvvlliavGtDYallLvsRyreelaagedr..eeaviravastgkvvtaaGltvaiamlgLvv 267
                 ++ +l v++s+ a++gl      ++g++++  ++     +++avG+D   l+v  +      + d+  e+ ++r+++++g+ ++++++t  + +   ++
  KHJ33216.1 638 IVGILIVLMSISASVGL----FSFAGVKVTLIIAEVIPFIVLAVGVDNIFLIVHEFDCVNISHTDAlvEDRIARTLGRIGPSILFSAITETFIFSLGAF 732
                 56688999999999999....3456999*******************7666666664333333332225679****************98777777789 PP

        MMPL 268 arlpvlaqvGvaialGvlvdvlivlTllPAllvllGra 305
                 + +p+++++++++a +v++ + + +T+  ++l+l  r+
  KHJ33216.1 733 VGMPAVKNFAIYAAGAVFINAILQVTMFVSILALNQRR 770
                 9*******************************998777 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.015
        MMPL  149 evvtlvvilviLlivyrSlvaallplltvvvsllaalglvlila.lllglelstfvlgllvvlliavGtDYallLvsR..yreelaagedreeavir 242 
                     ++v+i++i  i+++S+ +a+++  tv++ ++  +g+++i++  l+++ l + ++   + + + + ++ a ++ sR  + ++ ++ +dr++ + +
  KHJ33216.1 1083 LGYAFVLIFLISSILLGSFQTAFVVTFTVIMIVVDIIGTMAIFNiSLNAISLVNLIICVGIGVEFCAHIARAFMFPSRsiIEQAKNKFRDRDARAWT 1179
                  4568899**************************9999996555414555666666655555666666777788999995334444444566667889 PP

        MMPL  243 avastgkvvtaaGltva..iamlgLvvarlpvlaqvGvaialGv.lvdvlivlTllPAllvllGraa 306 
                  a+ ++g+ v ++G+tv   + +  L+++r +++    + i l++ l++   +l +lP +l+l+G  +
  KHJ33216.1 1180 ALVGVGGSV-FSGITVTklLGVTVLAFTRSKIFDIYYFRIWLALvLFAGIHALIFLPVVLSLFGGNG 1245
                  999999997.79999972245566*********9999998888526788999999999999999775 PP

>> ACR_tran  AcrB/AcrD/AcrF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7  10.9   1.2e-05     0.036     333     399 ..    1078    1145 ..    1048    1241 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.2e-05
                  HHHHHH.HHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHTT--BCHHHHHHHHHHHHHHH CS
    ACR_tran  333 VvktLl.eaivLvvlvvflFLqnlratlipaiavPlsllgtfavlkalgfslNlltLfgLvlAiGlvv 399 
                   ++tLl  a vL++l+  + L++++++ +++ +v + ++  +  ++++++slN+++L+ L + +G+ v
  KHJ33216.1 1078 LSTTLLgYAFVLIFLISSILLGSFQTAFVVTFTVIMIVVDIIGTMAIFNISLNAISLVNLIICVGIGV 1145
                  4555543799*********************9999999999999*********************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1023  (0.0570584); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.90u 0.33s 00:00:01.23 Elapsed: 00:00:00.48
# Mc/sec: 8024.01
//
Query:       KHJ33217.1  [L=628]
Description: putative mitochondrial rho gtpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.1e-34  117.4   0.0    5.1e-34  116.1   0.0    1.7  1  EF_assoc_2      EF hand associated
    1.1e-28   98.7   0.6      2e-28   97.8   0.6    1.5  1  EF_assoc_1      EF hand associated
    2.8e-24   85.5   0.0    3.2e-16   59.3   0.0    2.2  2  Ras             Ras family
    1.1e-13   51.5   0.0    5.6e-09   36.3   0.0    2.4  2  Roc             Ras of Complex, Roc, domain of DAPkinase
    2.3e-09   37.3   0.0    5.3e-05   23.3   0.0    3.0  2  MMR_HSR1        50S ribosome-binding GTPase
    2.3e-08   33.3   2.2    0.00049   19.8   0.1    2.8  2  EF-hand_6       EF-hand domain
    3.2e-08   32.5   2.9     0.0045   16.4   0.1    2.8  2  EF-hand_1       EF hand
      1e-07   32.3   0.9     0.0006   20.2   0.2    2.6  2  EF-hand_7       EF-hand domain pair
    1.1e-05   25.6   0.2       0.34   10.9   0.0    3.3  4  Dynamin_N       Dynamin family
    7.1e-05   22.5   0.0      0.056   13.2   0.0    2.4  2  AAA_29          P-loop containing region of AAA domain
     0.0001   22.7   0.0       0.19   12.1   0.0    2.5  2  AAA_16          AAA ATPase domain
    0.00023   21.4   0.0       0.37   11.0   0.0    2.8  2  AAA_28          AAA domain
    0.00039   20.2   3.6     0.0063   16.4   0.2    2.7  2  EF-hand_10      EF hand
    0.00039   19.8   5.1      0.066   12.7   2.1    2.8  2  EF-hand_5       EF hand
     0.0022   18.3   0.0       0.24   11.7   0.0    2.4  2  AAA_22          AAA domain
     0.0038   17.0   0.0       0.11   12.2   0.0    2.5  2  AAA_24          AAA domain
     0.0054   17.1   0.0       0.26   11.7   0.0    2.7  2  RNA_helicase    RNA helicase
      0.007   15.9   0.0        8.2    5.9   0.1    3.1  3  GTP_EFTU        Elongation factor Tu GTP binding domain
  ------ inclusion threshold ------
      0.017   15.0   0.0        1.9    8.3   0.0    3.2  3  RsgA_GTPase     RsgA GTPase
      0.023   14.6   0.0        1.6    8.6   0.0    2.3  2  Ploopntkinase3  P-loop Nucleotide Kinase3
      0.041   14.1   0.0         17    5.6   0.1    2.8  3  AAA_33          AAA domain
      0.043   14.3   0.0        9.2    6.8   0.0    2.6  2  ABC_tran        ABC transporter
      0.057   12.6   0.0       0.68    9.0   0.0    2.2  2  DUF815          Protein of unknown function (DUF815)
      0.067   13.7   0.1        1.8    9.1   0.2    2.7  2  AAA_18          AAA domain
      0.068   13.3   0.0       0.11   12.6   0.0    1.3  1  DUF3426         Protein of unknown function (DUF3426)
       0.11   11.6   0.0        3.5    6.6   0.1    2.3  2  MCM             MCM P-loop domain
       0.22   10.9   0.0         21    4.3   0.0    2.2  2  FtsK_SpoIIIE    FtsK/SpoIIIE family


Domain annotation for each model (and alignments):
>> EF_assoc_2  EF hand associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.1   0.0   7.7e-37   5.1e-34       1      87 []     220     306 ..     220     306 .. 0.98

  Alignments for each domain:
  == domain 1  score: 116.1 bits;  conditional E-value: 7.7e-37
  EF_assoc_2   1 kpLseeeledikevvskklpegveeegltlkGFlllnklfiekGrhettWtvLrkFgYddsLsLkeeflhPkldvpedssveLspkG 87 
                 k+Ls+++le+ik++++  +p+++ ++g+++ GF++lnk+++ekGrhet+W++LrkF+Y+dsLsLke+flhPk+++pe+ss+eLsp+G
  KHJ33217.1 220 KSLSSDDLENIKSSLKAVFPNSNIKKGIDQIGFIHLNKMYAEKGRHETIWIILRKFHYTDSLSLKESFLHPKFEIPEYSSAELSPAG 306
                 5799*********************************************************************************98 PP

>> EF_assoc_1  EF hand associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.8   0.6   3.1e-31     2e-28       1      74 [.     344     417 ..     344     418 .. 0.94

  Alignments for each domain:
  == domain 1  score: 97.8 bits;  conditional E-value: 3.1e-31
  EF_assoc_1   1 WaeaefpsstvtneegavtlqGwLaqWsltTlldvkttleyLaYlGypssslseeettsAlkvtrprkldrkkk 74 
                 W e++fpsstv+ne+g++tlqGwLaqWs+tT+  ++ttl+yLaYlG++ ++ +   ttsAlk+t+ rk++++++
  KHJ33217.1 344 WLETSFPSSTVRNEAGYITLQGWLAQWSMTTFASPSTTLSYLAYLGFEPATGPRIATTSALKITKARKRRQRSG 417
                 9**********************************************97766777799************9976 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.3   0.0   4.9e-19   3.2e-16       2     160 ..       6     167 ..       5     169 .. 0.86
   2 !   24.2   0.0   3.1e-08     2e-05       4     135 ..     428     558 ..     425     585 .. 0.78

  Alignments for each domain:
  == domain 1  score: 59.3 bits;  conditional E-value: 4.9e-19
                 EEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHHH CS
         Ras   2 lvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikrv 100
                 + + Gd+++GK+sl+++ vkd F  ++++T+  + ++       ++v+ +i DT    + ++  ++ +r++++illvy+  ++ s+e+v+ ++  + r 
  KHJ33217.1   6 ICVCGDEGTGKSSLITSLVKDVFVMNKIQTVLPQITIPPSIGTPENVTTTIVDTTTLPHERETLRKELRKSNVILLVYA--DHYSYERVALFWMPFFRS 102
                 7799***************************545555555555899*********999988888999***********6..99*******999999999 PP

                 STTTSEEEEEEETTTGGG....G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras 101 aeenvpivLvGnKvDlee....kravsteegeelakelg.lkfletSAktnenveeafeellrei 160
                    n+p+vL++nK+Dl       ++v+ e    +a+ ++    + tSA++++nv+e+f  + +++
  KHJ33217.1 103 LGVNIPVVLCANKSDLPAngstAQVVEDEMLPMMAEFKEiDSCIRTSAREHHNVNEVFFLCQKAV 167
                 9999************9888866777777777777777745689**************9887765 PP

  == domain 2  score: 24.2 bits;  conditional E-value: 3.1e-08
                 EEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHH.HHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHHHS CS
         Ras   4 lvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslr.elyyrdaegillvyditsresfenvkkwveeikrva 101
                 ++G  + GK+sll  f +  F++ y +Ti   + ++++e++g +    i    G  e   l  ++ +  +++i  +yd ++ +sf+++ ++ e+  +  
  KHJ33217.1 428 ILGAPSSGKSSLLDAFLNRPFDTLYRPTIRPRSAVNSVELHGGKQCYLIIEELGELEPAILDnPTKLDACDVICYTYDSSDPDSFSHIVSLREKYPQLD 526
                 89***************************************66655666677787777777515667778899999**************999987766 PP

                 TTTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHT CS
         Ras 102 eenvpivLvGnKvDleekravsteegeelakelg 135
                 e  +p +  + K+D +++ + s+ + +e+   l+
  KHJ33217.1 527 E--IPAIYTALKADQDKTTQRSELQPHEYTMALN 558
                 5..9999999999998866655555555554444 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3   0.0   8.4e-12   5.6e-09       1     119 [.       5     117 ..       5     118 .. 0.85
   2 !   12.7   0.0   0.00016      0.11       4      35 ..     428     459 ..     426     476 .. 0.85

  Alignments for each domain:
  == domain 1  score: 36.3 bits;  conditional E-value: 8.4e-12
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE.GHHHHCHH.H CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd.srssenlk.e 97 
                 +++++Gd+g+GK+sl++++v+d f  ++ +t+  +++     +i +       ++v+  i Dt    + r++ +  lr++++++lvy    s+e++   
  KHJ33217.1   5 RICVCGDEGTGKSSLITSLVKDVFVMNKIQTVLPQITIPP--SIGT------PENVTTTIVDTTTLPHERETLRKELRKSNVILLVYAdHYSYERVAlF 95 
                 689***************************9987775432..2333......2468899***************************9725577777538 PP

                 HHHHHHHHCSSS-EEEEEE-TT CS
         Roc  98 WlkelkkvagkspvilvgnkiD 119
                 W+  +++ + ++pv+l++nk D
  KHJ33217.1  96 WMPFFRSLGVNIPVVLCANKSD 117
                 ********************99 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00016
                 EESSTTSSHHHHHHCHCT-CCC-EEETTTTEE CS
         Roc   4 lvGdsgvGKtsllkrfvedkfsekekstigvd 35 
                 ++G  ++GK+sll+ f+++ f++ +++ti   
  KHJ33217.1 428 ILGAPSSGKSSLLDAFLNRPFDTLYRPTIRPR 459
                 89************************999655 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0     8e-08   5.3e-05       1      93 [.       5      90 ..       5     115 .. 0.69
   2 !   10.9   0.0   0.00055      0.36       3      23 ..     427     447 ..     425     536 .. 0.84

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 8e-08
                EEEEEESTTSSHHHHHHHHHTS....TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETTTTCSHHH CS
    MMR_HSR1  1 evaivGrpNvGKStLinaltge....kaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflaleeadlillvvdaseeklkpl 93
                ++++ G   +GKS+Li +l+++    + i +  p+ T+ +  g+ +  +   ++vDt  l +   e++ l+k+++   ++++illv     + ++ +
  KHJ33217.1  5 RICVCGDEGTGKSSLITSLVKDvfvmNKIQTVLPQITIPPSIGTPE--NVTTTIVDTTTLPH---ERETLRKELR---KSNVILLVYA-D-H-YSYE 90
                689******************8665456778999*********988..8899*******766...4445555555...5777777764.3.2.3333 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00055
                 EEEESTTSSHHHHHHHHHTST CS
    MMR_HSR1   3 aivGrpNvGKStLinaltgek 23 
                  i+G p +GKS+L+ a +++ 
  KHJ33217.1 427 YILGAPSSGKSSLLDAFLNRP 447
                 79**************99974 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.3    0.0002      0.13       2      25 ..     190     213 ..     189     225 .. 0.87
   2 !   19.8   0.1   7.4e-07   0.00049       2      27 ..     310     335 ..     309     342 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.0002
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrka 25 
                 l+++F l Dkd dG+++ +E+ ++
  KHJ33217.1 190 LKRIFYLCDKDQDGYLNDQEMEHF 213
                 799**************9999876 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 7.4e-07
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrkalr 27 
                 + ++F lfDkd+dG +d  El ++++
  KHJ33217.1 310 FVDLFLLFDKDNDGGLDGTELEALFS 335
                 789******************99987 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.1   6.8e-06    0.0045       2      25 ..     190     213 ..     189     217 .. 0.90
   2 !   15.5   0.5   1.3e-05    0.0087       3      26 ..     311     334 ..     309     336 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 6.8e-06
                 HHHHHHHHTTTSSSEEEHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkel 25 
                 lk+iF + DkD+dG+++ +E+ ++
  KHJ33217.1 190 LKRIFYLCDKDQDGYLNDQEMEHF 213
                 799*****************9876 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 1.3e-05
                 HHHHHHHTTTSSSEEEHHHHHHHH CS
   EF-hand_1   3 keiFrefDkDgdGkIdfeEfkell 26 
                  ++F +fDkD+dG +d  E+ +l+
  KHJ33217.1 311 VDLFLLFDKDNDGGLDGTELEALF 334
                 578*****************9887 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.2     9e-07    0.0006       3      47 ..     189     228 ..     188     245 .. 0.80
   2 !    9.7   0.0    0.0017       1.1       7      28 ..     313     334 ..     310     348 .. 0.89

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 9e-07
   EF-hand_7   3 klkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdeele 47 
                 +lk++F + D+d+dgyl+ +e++++  k     + +++ls++ le
  KHJ33217.1 189 ALKRIFYLCDKDQDGYLNDQEMEHFQSK-----CFDKSLSSDDLE 228
                 699********************99998.....445555554443 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0017
   EF-hand_7   7 aFkelDtdgdgyldkeellrll 28 
                  F ++D+d+dg ld +el+ l+
  KHJ33217.1 313 LFLLFDKDNDGGLDGTELEALF 334
                 6889**************9765 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.1   0.00054      0.36       1      26 [.       6      31 ..       6      77 .. 0.87
   2 ?   -1.6   0.0       3.8   2.5e+03      97     137 ..      48      84 ..      29      92 .. 0.68
   3 ?   -2.7   0.0         8   5.3e+03      25      47 ..     393     415 ..     386     422 .. 0.75
   4 !   10.9   0.0   0.00052      0.34       3      23 ..     428     448 ..     426     565 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00054
                EEEEEBTTTTHHHHHHHHHTS--S-- CS
   Dynamin_N  1 iavvGsqSsGKSSvlnaLlgedilpr 26
                i+v+G+   GKSS++ +L+++ +  +
  KHJ33217.1  6 ICVCGDEGTGKSSLITSLVKDVFVMN 31
                89*****************9887655 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 3.8
                 ETTS-SEEEEE---B-SSSGTTSHHHHHHHSTTEEEEEEEE CS
   Dynamin_N  97 sllvkgltlvDlPGldsvnkrdqelvkeyikkadiilavts 137
                 ++ + + t+vD+   +  ++++ e +++ ++k+++il+v +
  KHJ33217.1  48 TPENVTTTIVDT---TTLPHER-ETLRKELRKSNVILLVYA 84 
                 555666677776...2223333.677888888888888754 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 8
                 ---SSS---S-EEEEECCT---C CS
   Dynamin_N  25 prgpnptTrrplelqlgeeeeas 47 
                  +gp + T   l++++ ++ + +
  KHJ33217.1 393 ATGPRIATTSALKITKARKRRQR 415
                 48999999999999998877744 PP

  == domain 4  score: 10.9 bits;  conditional E-value: 0.00052
                 EEEBTTTTHHHHHHHHHTS-- CS
   Dynamin_N   3 vvGsqSsGKSSvlnaLlgedi 23 
                 ++G+ SsGKSS+l+a l +++
  KHJ33217.1 428 ILGAPSSGKSSLLDAFLNRPF 448
                 6899*************9986 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0098       6.5      26      39 ..       7      20 ..       2      33 .. 0.85
   2 !   13.2   0.0   8.4e-05     0.056      25      42 ..     426     443 ..     413     445 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0098
      AAA_29 26 lltGpsGsGKSTll 39
                 + G+ G+GKS+l+
  KHJ33217.1  7 CVCGDEGTGKSSLI 20
                578**********9 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 8.4e-05
      AAA_29  25 tlltGpsGsGKSTllDAi 42 
                 + + G+  sGKS+llDA+
  KHJ33217.1 426 CYILGAPSSGKSSLLDAF 443
                 6799*************7 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0056       3.7      27      46 ..       6      25 ..       2      40 .. 0.86
   2 !   12.1   0.0   0.00029      0.19      20      47 ..     415     446 ..     405     479 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0056
      AAA_16 27 vllsGesGvGKsslvrellr 46
                + + G+ G+GKssl+++l +
  KHJ33217.1  6 ICVCGDEGTGKSSLITSLVK 25
                5689***********98865 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 0.00029
      AAA_16  20 rsgrp....elvllsGesGvGKsslvrellra 47 
                 rsgr      l+++ G++ +GKssl++++l++
  KHJ33217.1 415 RSGRVernvVLCYILGAPSSGKSSLLDAFLNR 446
                 55555555578999**************9975 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0077       5.1       1      22 [.       5      26 ..       5      40 .. 0.81
   2 !   11.0   0.0   0.00056      0.37       3      23 ..     427     452 ..     425     472 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0077
      AAA_28  1 kivitGgestGKTtlleaLaar 22
                +i++ G e+tGK++l+  L ++
  KHJ33217.1  5 RICVCGDEGTGKSSLITSLVKD 26
                79**************999765 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00056
      AAA_28   3 vitGgestGKTtlleaLaar.....g 23 
                 +i+G++s+GK++ll a+ +r      
  KHJ33217.1 427 YILGAPSSGKSSLLDAFLNRpfdtlY 452
                 89************999877554433 PP

>> EF-hand_10  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.2   9.5e-06    0.0063      25      47 ..     192     214 ..     190     216 .. 0.92
   2 ?    3.9   0.1     0.075        50      26      45 ..     313     332 ..     309     335 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 9.5e-06
  EF-hand_10  25 kLFkkcDkSksgrLegeEieeFy 47 
                  +F  cDk ++g+L+++E+e+F 
  KHJ33217.1 192 RIFYLCDKDQDGYLNDQEMEHFQ 214
                 68999*****************5 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.075
  EF-hand_10  26 LFkkcDkSksgrLegeEiee 45 
                 LF   Dk ++g L+g E+e 
  KHJ33217.1 313 LFLLFDKDNDGGLDGTELEA 332
                 77778************996 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.1    0.0062       4.1       4      23 ..     193     212 ..     190     214 .. 0.81
   2 !   12.7   2.1   9.9e-05     0.066       1      24 [.     310     333 ..     310     334 .. 0.92

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0062
                 HHHHH-SS-SSCE-HHHHHH CS
   EF-hand_5   4 tFqaiDlNgDGkIskeELkt 23 
                  F   D+++DG+++ +E + 
  KHJ33217.1 193 IFYLCDKDQDGYLNDQEMEH 212
                 57777***********9875 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 9.9e-05
                 HHHHHHHH-SS-SSCE-HHHHHHH CS
   EF-hand_5   1 lkdtFqaiDlNgDGkIskeELktl 24 
                 ++d+F  +D+++DG ++  EL++l
  KHJ33217.1 310 FVDLFLLFDKDNDGGLDGTELEAL 333
                 5799*****************985 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   0.00036      0.24       8      72 ..       6      68 ..       2      92 .. 0.73
   2 ?    3.9   0.0     0.089        59       8      29 ..     426     447 ..     421     486 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00036
      AAA_22  8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevv..fvtlpsst.sskdllrellralglelkaer 72
                ++v+G  GtGK+ l+  l++          ++ ++v   +t+p s  +++++ + ++  ++l++++e+
  KHJ33217.1  6 ICVCGDEGTGKSSLITSLVKDVFVM-----NKIQTVlpQITIPPSIgTPENVTTTIVDTTTLPHERET 68
                79***************99986322.....45555567566555555888888888888888888722 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.089
      AAA_22   8 lvvtGesGtGKTtllrrlleql 29 
                 +++ G + +GK+ ll  +l++ 
  KHJ33217.1 426 CYILGAPSSGKSSLLDAFLNRP 447
                 6899**************9986 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   0.00017      0.11       2      29 ..       3      30 ..       2      34 .. 0.85
   2 ?    1.9   0.0      0.24   1.6e+02       6      26 ..     427     447 ..     423     455 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00017
      AAA_24  2 klkiliyGpsgiGKTtlakelgpkplfi 29
                +++i++ G++g+GK++l+++l ++++++
  KHJ33217.1  3 AVRICVCGDEGTGKSSLITSLVKDVFVM 30
                689*****************96666665 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.24
      AAA_24   6 liyGpsgiGKTtlakelgpkp 26 
                  i G + +GK++l+  + ++p
  KHJ33217.1 427 YILGAPSSGKSSLLDAFLNRP 447
                 699***********9996665 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   0.00039      0.26       1      23 [.       6      28 ..       6      59 .. 0.85
   2 ?    2.3   0.0      0.32   2.2e+02       1      20 [.     426     445 ..     426     464 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00039
  RNA_helicase  1 iwlyGpsgeGKStlakeLakall 23
                  i+++G++g+GKS+l+++L+k++ 
    KHJ33217.1  6 ICVCGDEGTGKSSLITSLVKDVF 28
                  79******************987 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.32
  RNA_helicase   1 iwlyGpsgeGKStlakeLak 20 
                   +++ G++  GKS+l + + +
    KHJ33217.1 426 CYILGAPSSGKSSLLDAFLN 445
                   5899**********998765 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.1     0.012       8.2       4      34 ..       4      34 ..       1      71 [. 0.80
   2 ?    4.4   0.0     0.037        24     120     183 ..     104     158 ..      78     177 .. 0.69
   3 ?    1.2   0.0      0.34   2.2e+02       2      24 ..     422     444 ..     421     448 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.012
                EEEEEEESTTSSHHHHHHHHHHHTTSSCHHH CS
    GTP_EFTU  4 rnigiighvDhGKtTLtdrLlyktgaiskkg 34
                + i+++g+  +GK++L+ +L+++   ++k +
  KHJ33217.1  4 VRICVCGDEGTGKSSLITSLVKDVFVMNKIQ 34
                689******************9887777755 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.037
                 HTTTEEEEEEESCGST..HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTBTHHH CS
    GTP_EFTU 120 kegvpiivfiNKmDrl..kaelkeiveevkqklsrkeeklekygekgekevpvvfgSalkgegvkt 183
                  +++p++++ NK D +  +++ + + +e+   +      + +++e +    +++++Sa +  +v++
  KHJ33217.1 104 GVNIPVVLCANKSDLPanGSTAQVVEDEML-PM------MAEFKEID----SCIRTSAREHHNVNE 158
                 57899**********985444444444433.33......22222222....355555555555554 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.34
                 CEEEEEEEESTTSSHHHHHHHHH CS
    GTP_EFTU   2 rirnigiighvDhGKtTLtdrLl 24 
                 +++ + i+g   +GK++L+d+ l
  KHJ33217.1 422 NVVLCYILGAPSSGKSSLLDAFL 444
                 5778999*************977 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0    0.0029       1.9     102     122 ..       6      26 ..       2      40 .. 0.83
   2 ?    2.0   0.0      0.26   1.7e+02      46      98 ..     106     164 ..      66     169 .. 0.75
   3 ?   -0.3   0.0       1.3   8.8e+02     103     121 ..     427     445 ..     405     457 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0029
                  EEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpe 122
                  ++++G  G GKS+Li +l+ +
   KHJ33217.1   6 ICVCGDEGTGKSSLITSLVKD 26 
                  5789*************9976 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.26
                  T-EEEEEEE-GGG--HHH.......HHHHHHHHHHHTTSEEEE--TTTHTTHHHHHHHCT CS
  RsgA_GTPase  46 giepvivlnKiDlleeee.......eleelkeelealgyevllvsaktkegleelkellk 98 
                  +i++v++ nK Dl  + +       e+  +++e+++++ +++ +sa+++++++e+  l++
   KHJ33217.1 106 NIPVVLCANKSDLPANGStaqvvedEMLPMMAEFKEID-SCIRTSAREHHNVNEVFFLCQ 164
                  7999*********9988855555555555566666663.455666666667666666655 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 1.3
                  EEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase 103 vlvGqSGvGKStLinallp 121
                   ++G    GKS+L++a+l+
   KHJ33217.1 427 YILGAPSSGKSSLLDAFLN 445
                  57788889******98765 PP

>> Ploopntkinase3  P-loop Nucleotide Kinase3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.078        52       6      33 ..       6      34 ..       1      60 [. 0.79
   2 ?    8.6   0.0    0.0024       1.6       4      32 ..     424     453 ..     421     486 .. 0.70

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.078
  Ploopntkinase3  6 iylvGqPGaGkstlmaeltk.gfdrskve 33
                    i + G+ G+Gks l+++l k  f+ +k++
      KHJ33217.1  6 ICVCGDEGTGKSSLITSLVKdVFVMNKIQ 34
                    7899************9986245555554 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0024
  Ploopntkinase3   4 rliylvGqPGaGkstlm.aeltkgfdrskv 32 
                      l y++G+P +Gks l+ a l ++fd    
      KHJ33217.1 424 VLCYILGAPSSGKSSLLdAFLNRPFDTLYR 453
                     589***********9983557788876544 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1     0.026        17       3      21 ..       7      25 ..       6      76 .. 0.92
   2 ?   -2.7   0.0       9.3   6.2e+03      73      97 ..      55      78 ..      49      90 .. 0.68
   3 ?    5.5   0.0     0.027        18       2      39 ..     426     462 ..     425     555 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.026
      AAA_33  3 llvGlpGsGKstlaerllk 21
                 ++G  G+GKs l+++l+k
  KHJ33217.1  7 CVCGDEGTGKSSLITSLVK 25
                68**************996 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 9.3
      AAA_33 73 vildatnlsrrerarflklarrlgv 97
                +i+d t l ++er+ ++k +r+ +v
  KHJ33217.1 55 TIVDTTTL-PHERETLRKELRKSNV 78
                55665544.7788888887777774 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.027
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdtlrrrlfg 39 
                  ++ G+p sGKs l++  l ++++ +l  +t+r r ++
  KHJ33217.1 426 CYILGAPSSGKSSLLDAFL-NRPFDTLYRPTIRPRSAV 462
                 6789************999.778888888887766554 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0     0.014       9.2      14      34 ..       6      26 ..       3      76 .. 0.84
   2 ?    4.6   0.0     0.067        44      15      32 ..     427     444 ..     419     450 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.014
                EEEEESTTSSHHHHHHHHTTS CS
                xxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 14 vaivGenGaGKStLlkllagl 34
                + + G+ G+GKS+L+  l + 
  KHJ33217.1  6 ICVCGDEGTGKSSLITSLVKD 26
                6789***********999876 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.067
                 EEEESTTSSHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxx RF
    ABC_tran  15 aivGenGaGKStLlklla 32 
                  i+G   +GKS+Ll +++
  KHJ33217.1 427 YILGAPSSGKSSLLDAFL 444
                 79************9986 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0     0.001      0.68      53      77 ..       3      27 ..       1      40 [. 0.86
   2 ?    0.8   0.0      0.33   2.2e+02      55      76 ..     422     446 ..     404     453 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.001
      DUF815 53 annvLLwGarGtGKSslvkallney 77
                a  + + G+ GtGKSsl+ +l++++
  KHJ33217.1  3 AVRICVCGDEGTGKSSLITSLVKDV 27
                6678899************999875 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.33
      DUF815  55 nvLL...wGarGtGKSslvkallne 76 
                 nv+L    Ga  +GKSsl+ a ln+
  KHJ33217.1 422 NVVLcyiLGAPSSGKSSLLDAFLNR 446
                 5544222699999******999886 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.2    0.0027       1.8       1      21 [.       6      26 ..       6      40 .. 0.85
   2 ?    1.1   0.0      0.82   5.5e+02       3      17 ..     428     442 ..     427     474 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.0027
      AAA_18  1 IlltGtpGvGKttlakeLskr 21
                I+++G  G+GK++l   L k 
  KHJ33217.1  6 ICVCGDEGTGKSSLITSLVKD 26
                9**************999886 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.82
      AAA_18   3 ltGtpGvGKttlake 17 
                 + G+p +GK++l ++
  KHJ33217.1 428 ILGAPSSGKSSLLDA 442
                 789*******99876 PP

>> DUF3426  Protein of unknown function (DUF3426)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00017      0.11      47     113 ..     492     557 ..     468     583 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00017
     DUF3426  47 rdielisiessslrekageanlvlegtlrNradkpqalpaleltLtDaqgqvvarrvlspaeyllan 113
                 +++++ ++  ++  + +++  +   ++lr ++++  ++pa+  +L+ +q+++ +r +l+p ey++a 
  KHJ33217.1 492 TKLDACDVICYTYDSSDPDS-FSHIVSLREKYPQLDEIPAIYTALKADQDKTTQRSELQPHEYTMAL 557
                 55555555555666555556.66678999**********************************6652 PP

>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.1    0.0053       3.5      57      78 ..       3      24 ..       1      36 [. 0.82
   2 ?    2.3   0.0      0.11        76      41      77 ..     407     443 ..     396     453 .. 0.66

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0053
                S-EEEEEESSTSTHHHHHHHHH CS
         MCM 57 dinvllvgdpgtaKsqlLkyve 78
                 + ++++gd gt+Ks l+ ++ 
  KHJ33217.1  3 AVRICVCGDEGTGKSSLITSLV 24
                688**************98765 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.11
                 H---EBBBSSSSBBCSS-EEEEEESSTSTHHHHHHHH CS
         MCM  41 fggvkkkledktklrgdinvllvgdpgtaKsqlLkyv 77 
                  ++ k++++++   r  +   ++g p+ +Ks lL + 
  KHJ33217.1 407 TKARKRRQRSGRVERNVVLCYILGAPSSGKSSLLDAF 443
                 44444444443334444555578***********865 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.1     0.038        25      42      68 ..       6      32 ..       2      37 .. 0.82
   2 ?    4.3   0.0     0.032        21      44      60 ..     428     444 ..     418     445 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.038
                  EEEE--TTSSHHHHHHHHHHHHHTT-- CS
  FtsK_SpoIIIE 42 llvaGatgsGKStalntLilSlattht 68
                  + v+G  g+GKS  + +L+  + ++++
    KHJ33217.1  6 ICVCGDEGTGKSSLITSLVKDVFVMNK 32
                  679************999977776665 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.032
                   EE--TTSSHHHHHHHHH CS
  FtsK_SpoIIIE  44 vaGatgsGKStalntLi 60 
                   ++Ga+ sGKS  l +++
    KHJ33217.1 428 ILGAPSSGKSSLLDAFL 444
                   99**********99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (628 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       615  (0.034302); expected 358.6 (0.02)
Passed bias filter:                      575  (0.0320709); expected 358.6 (0.02)
Passed Vit filter:                        82  (0.0045736); expected 17.9 (0.001)
Passed Fwd filter:                        27  (0.00150594); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              27  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.42
# Mc/sec: 4517.85
//
Query:       KHJ33218.1  [L=701]
Description: putative ser thr protein phosphatase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.9e-49  164.6   0.1    2.5e-48  163.3   0.0    1.7  2  DUF2433         Protein of unknown function (DUF2433)
    0.00044   20.8   0.0     0.0011   19.5   0.0    1.7  1  Metallophos     Calcineurin-like phosphoesterase
    0.00069   19.8   0.0     0.0023   18.2   0.0    1.8  1  Metallophos_2   Calcineurin-like phosphoesterase superfamily 
  ------ inclusion threshold ------
      0.052   14.5   1.1       0.31   12.0   0.1    2.8  3  LytR_C          LytR cell envelope-related transcriptional at
        2.6    7.1  17.5        4.4    6.4  17.5    1.3  1  SOG2            RAM signalling pathway protein


Domain annotation for each model (and alignments):
>> DUF2433  Protein of unknown function (DUF2433)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.3   0.0     7e-52   2.5e-48       1     124 []     280     411 ..     280     411 .. 0.97
   2 ?   -2.7   0.1       1.7   6.1e+03      51      70 ..     428     447 ..     418     462 .. 0.73

  Alignments for each domain:
  == domain 1  score: 163.3 bits;  conditional E-value: 7e-52
     DUF2433   1 YgssyNefsvnpsleayrsklakskakfaevwetvkkeveaaid..eaqrklLenalevvekiPtiak......eeakkneastskekeesafknlWnf 91 
                 YgssyNefsvnp+l++yr+kla+ska+f++vw+tvk+ev+ ai   +aq++lL+nal +vek+P++a       +++  ++a+   + +esafkn+Wnf
  KHJ33218.1 280 YGSSYNEFSVNPNLDHYRGKLAASKASFNDVWDTVKGEVQPAIAqnDAQQNLLQNALGIVEKMPSTALggnpfgGPVGGSSATGAGQVDESAFKNMWNF 378
                 9***************************************99988899******************9999999999999999999************** PP

     DUF2433  92 NLcDaaygslvldikegrigaelrsqGfnfayr 124
                 NL+Da++g+lvldi++gri++e+r+qGfnf++r
  KHJ33218.1 379 NLADATFGWLVLDIQDGRIATEMRAQGFNFSHR 411
                 *******************************98 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.7
     DUF2433  51 LenalevvekiPtiakeeak 70 
                  ++a +v++++P++++++a+
  KHJ33218.1 428 TNSANSVANNVPVSTAQAAS 447
                 56788899999999986655 PP

>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   3.1e-07    0.0011       2      75 ..      45     154 ..      44     265 .. 0.70

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 3.1e-07
                  EEEEEESBTBTTCCTHHHHHHHHHHHHHHHTTESEEEEEST..SSSSSHHHHHHHHHHHHHHHH.................................. CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddllreekpdlvllaGD..lvdrgdlekellellaalvky.................................. 63 
                  r+l+i+D+      g+l++l++l +++    ++d+++++GD  ++d  +l+   ++ l+++ +y                                  
   KHJ33218.1  45 RVLCIADVR-----GNLRSLNELAKQA----RADYIIHTGDfgFYDSQSLDRIAEKTLKHVAQYspllsdsvkksivtpggpvktrfdaselplselp 133
                  89*******.....**********999....99**********9999977775555577776666666555544444444444444444444445555 PP

                  .........TSEEEEEC-TTS CS
  Metallophos  64 .........pipvylllGNHe 75 
                           ++pvy++ G +e
   KHJ33218.1 134 qflnsslklDVPVYTVWGACE 154
                  555555666777777777666 PP

>> Metallophos_2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   6.3e-07    0.0023       2      75 ..      45     167 ..      44     211 .. 0.67

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 6.3e-07
  Metallophos_2   2 klaiiSDlHsnldaleavlealkevgvdaiihaGD..................................................l.eeeepevle 46 
                    +++ i+D+++nl+ l++++++ +++  d+iih+GD                                                  l   e p++l+
     KHJ33218.1  45 RVLCIADVRGNLRSLNELAKQ-ARA--DYIIHTGDfgfydsqsldriaektlkhvaqyspllsdsvkksivtpggpvktrfdaseLpLSELPQFLN 137
                    6899*****999999999888.455..9*******7777777777777777777777777777777776666666666665555523344457788 PP

  Metallophos_2  47 ellela.pvlaVrGNnDeevveedvlreaa 75 
                      l+l  pv++V G +++  v e++   + 
     KHJ33218.1 138 SSLKLDvPVYTVWGACEDVRVLEKFRSGEY 167
                    888877999999999983323333333333 PP

>> LytR_C  LytR cell envelope-related transcriptional attenuator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.8     1e+04      23      61 ..     225     261 ..     211     274 .. 0.45
   2 ?   12.0   0.1   8.7e-05      0.31      17      72 ..     395     448 ..     393     455 .. 0.80
   3 ?   -1.9   0.0       1.9   6.8e+03      36      63 ..     510     535 ..     498     541 .. 0.55

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.8
      LytR_C  23 LeerGftvgevgnagnadeettivy.reaaaaaakalaaa 61 
                 L + G + ++++n   +++et+i++ +  a  a + l ++
  KHJ33218.1 225 LLQMG-ELVDTANRVYDPTETRIFItH--ASPAREGLLNQ 261
                 44455.233323322223348888732..22233333333 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 8.7e-05
      LytR_C  17 arvadaLeerGftvgevgnagnadee....ttivyreaaaaaakalaaalglgelqedsv 72 
                 +r+a++++++Gf+ +  gn ++++++    t i++      +a+++a+ ++++++q++s 
  KHJ33218.1 395 GRIATEMRAQGFNFSHRGNKQHSSHQapssTAITN------SANSVANNVPVSTAQAASA 448
                 689*************7776666666999677773......7889999999998777665 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.9
      LytR_C  36 agnadeettivyreaaaaaakalaaalg 63 
                 a+n+ ++tt +++++  + a++l+ +l+
  KHJ33218.1 510 AEND-KSTTLINGTSS-NGADTLSPSLK 535
                 3333.34777763322.36667776665 PP

>> SOG2  RAM signalling pathway protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  17.5    0.0012       4.4     231     357 ..     400     525 ..     386     558 .. 0.62

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0012
        SOG2 231 plrsdqipfnl....srsrrssssgnsaspaangaqsetsersasssgvqssasstPlgegstsppgalsrqslsttgststltsssksrsssrsntna 325
                  +r + ++f+     + s+++++s++ ++++an   ++ + ++a++     sa   P  ++st++  +++++ +s++++ + +  s    ss++s++++
  KHJ33218.1 400 EMRAQGFNFSHrgnkQHSSHQAPSSTAITNSANSVANNVPVSTAQA----ASALRPPSPQSSTTH-FNPNQPRPSQPNNPRIPAASEAPPSSTASQQKS 493
                 3333322222222333455555555555555555545555543333....444454555555655.7888888999999999******99999999999 PP

        SOG2 326 sastprslattpappasaesfastlt.asrint 357
                 +a +p+s++t+p+ p  ae+ +st+  + ++++
  KHJ33218.1 494 NAPAPQSNVTQPS-PEKAENDKSTTLiNGTSSN 525
                 9999999999998.4444443333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (701 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       725  (0.0404373); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 4632.12
//
Query:       KHJ33219.1  [L=621]
Description: putative catabolite repression protein crec [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.3e-11   42.1  15.1    6.5e-05   23.6   0.3    5.7  5  WD40          WD domain, G-beta repeat
    9.3e-10   38.7   0.0     0.0011   19.2   0.0    3.5  3  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
    0.00025   21.0   0.1     0.0023   17.8   0.0    2.0  2  eIF2A         Eukaryotic translation initiation factor eIF2A
      0.009   14.6   0.0      0.016   13.7   0.0    1.3  1  Cytochrom_D1  Cytochrome D1 heme domain
  ------ inclusion threshold ------
      0.031   14.2   0.0        5.6    7.0   0.0    2.7  2  PD40          WD40-like Beta Propeller Repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.019        66       9      38 .]     299     328 ..     291     328 .. 0.74
   2 !   10.5   0.0   0.00025       0.9       8      37 ..     380     410 ..     373     411 .. 0.77
   3 !   23.6   0.3   1.8e-08   6.5e-05      12      38 .]     427     453 ..     415     453 .. 0.79
   4 !    8.5   1.0    0.0011       3.8       6      38 .]     462     500 ..     457     500 .. 0.74
   5 ?    0.4   0.1       0.4   1.4e+03      25      38 .]     589     602 ..     574     602 .. 0.72

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.019
                 SSSSEEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40   9 GHssvtslafspdgawl.asGsdDgtvriWd 38 
                  H  v+ +++ p ++ l ++++ Dg++ ++d
  KHJ33219.1 299 QH-AVSEIRWIPGSDSLfLAAHTDGSLVVYD 328
                 56.67778777777776258999******98 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00025
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +   + ++++afspd++ la  ++ gt+ri 
  KHJ33219.1 380 KFSnQRINAFAFSPDNRHLAVVCEGGTLRIV 410
                 434235*************98888*****95 PP

  == domain 3  score: 23.6 bits;  conditional E-value: 1.8e-08
                 S.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 s.vtslafspdgawlasGsdDgtvriWd 38 
                 + + ++++spdg+++++G+ D  v iW+
  KHJ33219.1 427 GfI-CVCWSPDGKYILTGGQDDLVSIWS 453
                 238.***********************5 PP

  == domain 4  score: 8.5 bits;  conditional E-value: 0.0011
                 EEESS.SSEEEEE....EETTSSEEEEE..ETTSEEEEEE CS
        WD40   6 tltGH.ssvtsla....fspdgawlasG..sdDgtvriWd 38 
                  + GH s+vt+++     ++d+++ + G  ++D+ + +Wd
  KHJ33219.1 462 RCQGHhSWVTAVSfdpwRCDDSNYRF-GsvGEDCRLLLWD 500
                 56899899****98888556666655.5235799999998 PP

  == domain 5  score: 0.4 bits;  conditional E-value: 0.4
                 EEEEETTSEEEEEE CS
        WD40  25 lasGsdDgtvriWd 38 
                 ++++++ g++r Wd
  KHJ33219.1 589 ILTSCRSGHLRTWD 602
                 345666*******8 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.9   0.0    0.0092        33      37      73 ..     298     335 ..     270     347 .. 0.81
   2 !   19.2   0.0   3.1e-07    0.0011      28      80 ..     377     425 ..     362     431 .. 0.87
   3 !   10.7   0.0   0.00014      0.51      43      89 ..     430     475 ..     426     477 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0092
  ANAPC4_WD40  37 edsevrsLaWkp.dgklLavaysdgevrlldaesgkvv 73 
                  +++ v++++W p +++l+  a+ dg++ ++d e+ +  
   KHJ33219.1 298 NQHAVSEIRWIPgSDSLFLAAHTDGSLVVYDKEKDDAA 335
                  568999****87467888999**********9998765 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 3.1e-07
  ANAPC4_WD40  28 rvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                   +w++    ++++++++a++pd++ Lav+++ g++r++d  ++k++ ++s   
   KHJ33219.1 377 SIWKF----SNQRINAFAFSPDNRHLAVVCEGGTLRIVDYLKEKLLGNFSSYY 425
                  57777....7899********************************99998765 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 0.00014
  ANAPC4_WD40  43 sLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  +++W+pdgk +  + +d  v++ + ++ ++v  ++ +++  vt +++
   KHJ33219.1 430 CVCWSPDGKYILTGGQDDLVSIWSFSEYRIVARCQGHHS-WVTAVSF 475
                  689*****************************9998877.4777665 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.11   4.1e+02      70     137 ..     263     334 ..     253     347 .. 0.77
   2 !   17.8   0.0   6.5e-07    0.0023      30     153 ..     355     477 ..     331     480 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.11
                 TSS-EEEEESSSSCEEEEEEC......SCEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEE CS
       eIF2A  70 kskefaviyGkmpakvslfdl......kvkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkk 137
                 +++++ +i G++  ++  ++       +++++  +++++   i + p    + la    + G+l ++d++k + 
  KHJ33219.1 263 SQHHIDIIMGFSSGEIIWYEPisqkytRLNKKGIINQHAVSEIRWIPGSDSLFLAAH--TDGSLVVYDKEKDDA 334
                 567788999999999999998665444499999999999999999999999999974..679999999886554 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 6.5e-07
                 TT-CEEEEEEEEEESSSTT--EEECCEESSS.EEEEEE-TTSS-EEE.EESSSSCEEEEEECSCEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EE CS
       eIF2A  30 ktnksyygetelyliklkkkksevvelkkegpihdvaWspkskefav.iyGkmpakvslfdlkvkviskleeqkrNtiffspkgklvllaGfgnlaGel 127
                 +++++    ++++  + k +++++ + +++  i ++a sp+++++av ++G   + v+  + k+   ++       ++ +sp gk++l++G  +l   +
  KHJ33219.1 355 NSEQILHVDKSVHSKNQKFNPVSIWKFSNQ-RINAFAFSPDNRHLAVvCEGGTLRIVDYLKEKLLGNFSSYYGGFICVCWSPDGKYILTGGQDDL---V 449
                 556666677777777777778888888888.6********999997527999999999999999999999999999*******************...9 PP

                 EEEETTTTEEEEEEE..-TT--EEEE-T CS
       eIF2A 128 eiwdvkkkkkiakae..aanatlvewsp 153
                 +iw  ++++ +a+ +  +++ t v ++p
  KHJ33219.1 450 SIWSFSEYRIVARCQghHSWVTAVSFDP 477
                 9**9999999987642266667776665 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   4.6e-06     0.016       8      87 ..     400     476 ..     393     491 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 4.6e-06
                   EEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEEEEEEE--T CS
  Cytochrom_D1   8 vvverdagkvalldgdskeilavletgyalHisrvfasdgRyvyvigRDgkvtliDLwakeivaevkiGlnarsvavSqd 87 
                   vv   + g ++++d  +++ l ++ + y   i +  ++dg+y+++ g D  v++  + + +iva+  +G  +   avS d
    KHJ33219.1 400 VV--CEGGTLRIVDYLKEKLLGNFSSYYGGFICVCWSPDGKYILTGGQDDLVSIWSFSEYRIVARC-QGHHSWVTAVSFD 476
                   44..45689*******************************************************96.6888888888855 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.013        46       8      24 ..     383     399 ..     380     401 .. 0.80
   2 ?    7.0   0.0    0.0016       5.6      16      23 ..     433     440 ..     425     441 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.013
                 SS.EEEEEE-TTSSEEE CS
        PD40   8 pgnegaPsfSPDGkrla 24 
                 ++ + a++fSPD + la
  KHJ33219.1 383 NQRINAFAFSPDNRHLA 399
                 556789******99886 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0016
                 E-TTSSEE CS
        PD40  16 fSPDGkrl 23 
                 +SPDGk++
  KHJ33219.1 433 WSPDGKYI 440
                 ******99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (621 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       511  (0.0285013); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.61u 0.24s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4331.69
//
Query:       KHJ33220.1  [L=81]
Description: hypothetical protein EV44_g0257 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       349  (0.0194657); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 591.99
//
Query:       KHJ33221.1  [L=493]
Description: putative homoserine o-acetyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      4e-43  147.9   0.0      1e-42  146.6   0.0    1.6  1  Abhydrolase_1  alpha/beta hydrolase fold
    0.00018   22.2   0.3    0.00033   21.3   0.3    1.4  1  Abhydrolase_6  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.6   0.0   1.1e-46     1e-42       1     255 [.      71     440 ..      71     441 .. 0.93

  Alignments for each domain:
  == domain 1  score: 146.6 bits;  conditional E-value: 1.1e-46
                    SEEEEE-STTTCGGG..GTTGHHHHHHHHT....TSEEEEEEETTSTTSSSTTTGB...........CHHSHHHHHHHHH..HH.HHHCTTSSEE. CS
  Abhydrolase_1   1 pvlvilhGlpgssdv..waerglapaLakd....gfdvillDlrGvgySspapacin..........ddygtasvaddld..ri.ldalgddklt. 76 
                    +v+v++h+l+gs+d+  w++++++ +  +     +f+vi+++++G++y+s++p +            +++++ +++dd++  ++ ld lg+++++ 
     KHJ33221.1  71 NVIVVCHALTGSADIrdWWGPLIG-GPGRIfdltKFFVICMNSLGSPYGSASPVTYKdgdskkgiygPEFPLTTIRDDVNfhKLlLDELGVKRVAa 165
                    79******************9997.444446688*******************9988***********************99667*********** PP

                    EEEETHHHHHHHHHHHHHGGGEEEEEEESE....CSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHH..... CS
  Abhydrolase_1  77 lvGhSmGGmialayaaeyperVkalvllga....idpaaslieaqrqqaksfpdffdgyaadcarnpagplladelaaleqrhrlvdalkf..... 163
                    ++G+SmGGm++l++a   ++++++++ +++    +++ +s++eaqrq ++ +p+++dgy+  ++++++g+ +a+++a+l++r+  +++  f     
     KHJ33221.1 166 VIGGSMGGMLVLEWAYFGKDYIRCIAPIATsgrhSAWGISWGEAQRQCIYADPKYNDGYYSFEEPPSSGLGAARMSALLTYRSWDSFEARFsrkps 261
                    **********************************************************************************998888888***** PP

                    .....................................................HCHHHCCHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHC CS
  Abhydrolase_1 164 .....................................................pdkskrfpssgsdnasslatgalksieqwpttdsaklllrlre 206
                                                                         p+ sk+ + ++s +  s++ +++k  +++ t++sa+++lr+ +
     KHJ33221.1 262 dvskmtpaldfdssspgdihlaihndghiskqslnnstpsktktnkgerpvscPLESKDQNANDSVPKLSPKIEHVK--SPALTHFSAQSYLRYKG 355
                    ***********************************************999999888888888888888888888865..56789999999999999 PP

                    ...............................THHHHS....EEEEEEETTCSSSCHHHHHHHHHCHTS.EEEEEEETCSSSHHHH CS
  Abhydrolase_1 207 ...............................lknvla....ptlvisgtsDplvppkaledlaqllpk.krlvvisdagHlafle 255
                                                   ++++la    p+lv++++sD+l+  +++e+la+++p+  + +++s +gH+afl+
     KHJ33221.1 356 tqfakrfdancyisisrkldthdlsrsrsssITEALAmieqPALVLGIESDGLFNFSQQEELASAIPNsRLDKIDSIEGHDAFLL 440
                    9999999999*********************5555556666*************99************999999********985 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.3   3.7e-08   0.00033       1     126 [.      73     251 ..      72     288 .. 0.53

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 3.7e-08
                    EEEE--GC.......GCHHHH.....HHHHCCT.....CEEEEE--TTS..TS-GGCS--HHH.......C.........HHH....HHHHCCTT. CS
  Abhydrolase_6   1 vlllHGagss..assWlvapL.....aallaag.....vhvlapDlpGh..Grsdpppldled.......l.........adl....aalldelaa 62 
                    ++++H++ +s   ++W ++pL     +           + v+++   G   G  + +p ++ d       +         +d+      lldel  
     KHJ33221.1  73 IVVCHALTGSadIRDW-WGPLiggpgR-----IfdltkFFVICMNSLGSpyG--SASPVTYKDgdskkgiYgpefplttiRDDvnfhKLLLDEL-- 158
                    6788885555555555.4466333332.....13333456699999999988..4444333332222222022222222255513333366666.. PP

                    .TTSE.EEEEETCHHHHHHHHHHCC...............................EEEEES-..----TTT....S----TTHHHHHHTT-C.CC CS
  Abhydrolase_6  63 gggpv.vlvGHSlGGalalaaapla.............................lvvgvlldppptalpagl....laaalelllallallrl.la 123
                    g ++v  ++G S+GG+l+l+    a                             ++ +++ dp    + +g+     ++   l +a++++l +   
     KHJ33221.1 159 GVKRVaAVIGGSMGGMLVLE---WAyfgkdyirciapiatsgrhsawgiswgeaQRQCIYADP---KYNDGYysfeEPPSSGLGAARMSALLTyRS 248
                    588888**************...8877777766666666666666666666666555666666...333333333222222222222222222223 PP

                    CHC CS
  Abhydrolase_6 124 wls 126
                    w+s
     KHJ33221.1 249 WDS 251
                    332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (493 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 3393.47
//
Query:       KHJ33222.1  [L=433]
Description: putative duf1682 domain proteiin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   2.6e-104  348.9   2.3     3e-104  348.7   2.3    1.0  1  DUF1682     Protein of unknown function (DUF1682)
  ------ inclusion threshold ------
        9.3    6.6  15.8         16    5.9  15.8    1.3  1  OmpH        Outer membrane protein (OmpH-like)


Domain annotation for each model (and alignments):
>> DUF1682  Protein of unknown function (DUF1682)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  348.7   2.3  3.3e-108    3e-104       1     323 []      70     424 ..      70     424 .. 0.98

  Alignments for each domain:
  == domain 1  score: 348.7 bits;  conditional E-value: 3.3e-108
     DUF1682   1 nfklEilllvllllyvlnyfiGkrkNkkiAkkwaaahkpllesnFalvgfd...........aekksslllkeseseftlyatGRrnvasllvtlkLlk 88 
                 +f +E+++l++l +++++++iG++kN+k++k+++a + p l+++F l+gf+           +e+ ++++ ++s+sef++yatGR+n+a+l+++++Llk
  KHJ33222.1  70 EFVQEAIILAFLSIIIIVHLIGTSKNRKKVKNIVAVLGPSLHKEFGLLGFGtspsekndawnQEDVEDIIREKSPSEFASYATGRQNIAFLDININLLK 168
                 699***********************************************************999999******************************* PP

     DUF1682  89 RqdllslllelvlslffesvaapkDrveievyledgk.....................amdgfVfavvkKkemkklrkdrydlesltktkdnsklpeel 166
                 R+ +lsl++e ++s+ffes+aap++++e+++y++dgk                     ++dgfV+a+v+K+++k+lr+drydl slt+tkdnsklp+++
  KHJ33222.1 169 RYSPLSLFVEAAMSVFFESIAAPTEQIEATIYPFDGKetlllpktslaigesrkhfnsNFDGFVWAIVNKDNLKNLRDDRYDL-SLTSTKDNSKLPNWA 266
                 ***********************************************************************************.*************** PP

     DUF1682 167 vvmsEsaevtealltpellkalnkagklleyliitDqpskkpetke..serkrlilslrlpssssdleelspllklvlrliDklakraklrpevlkklk 263
                 ++msEs+e+te llt+el+ a++k++++l+yliitDqp+++p + e  +++kr++l l++ps   +++ + p+++++l l+D+l+++a++rpe+ +k++
  KHJ33222.1 267 TIMSESSEITELLLTSELITAIEKSNEMLNYLIITDQPIDQPVKLEdtTPKKRIYLGLKIPSAG-EYSCILPIFNYFLCLTDSLVQHAHFRPEISRKIR 364
                 ********************************************6668999**********554.8*******************99************ PP

     DUF1682 264 ktReevekklkkeaeeekaEeaqekkeeekkkereeklaklspeeqrKyeekerkkeakK 323
                 +tRee+++k++k +ee kaEe++ ++e++kk +r+  l+ l++++q+Ky+eke++ke++K
  KHJ33222.1 365 ATREEAIRKILKSQEELKAEERNLEREKAKKLKRDLDLKALDSKAQKKYLEKEKEKEMRK 424
                 ***********************************************************9 PP

>> OmpH  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9  15.8    0.0017        16       8      93 ..     347     432 ..     345     433 .] 0.84

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0017
                 HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS.-HHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHH CS
        OmpH   8 qkileespegkaaqeqlekkfkklqaeleakekelqklqeelqkkakklekeekeqelqkkeqelqqkqqqka..qelqkkqqellkp 93 
                 ++++++   + ++  ++ +++++   ++ + ++el++++++l+++++k  k ++  +l+++  + q+k+ +k+  +e++k q++l+++
  KHJ33222.1 347 DSLVQHAHFRPEISRKIRATREEAIRKILKSQEELKAEERNLEREKAK--KLKRDLDLKALDSKAQKKYLEKEkeKEMRKSQKKLVQK 432
                 677888888889999********99*****************987777..66677778888888888777777779999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1662  (0.092699); expected 358.6 (0.02)
Passed bias filter:                      533  (0.0297284); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 3090.10
//
Query:       KHJ33223.1  [L=401]
Description: putative arrestin domain conatining protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-12   48.6   0.0    3.1e-12   47.1   0.0    1.8  3  Arrestin_C  Arrestin (or S-antigen), C-terminal domain


Domain annotation for each model (and alignments):
>> Arrestin_C  Arrestin (or S-antigen), C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0      0.74   1.3e+04      36      54 ..      47      65 ..      34      86 .. 0.73
   2 ?   -2.9   0.0      0.48   8.6e+03     117     131 ..      98     112 ..      87     113 .. 0.74
   3 !   47.1   0.0   1.7e-16   3.1e-12       2     131 ..     185     340 ..     184     343 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 0.74
                EEEEEEEEEEEEEEESS.. CS
  Arrestin_C 36 vkkikvslvqhvdvcafnr 54
                +  ++++l ++ +++ + +
  KHJ33223.1 47 ISLVRICLLRRETIHPSAE 65
                5568888888888887754 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.48
                 SEEEEEEEEEEEEEB CS
  Arrestin_C 117 sggelslelPivlgs 131
                 s + + ++lP+vl++
  KHJ33223.1  98 SESIVLMDLPFVLFI 112
                 66678899****986 PP

  == domain 3  score: 47.1 bits;  conditional E-value: 1.7e-16
                 ---EEEEEEES-SEEETT--EEEEEEEE......E.-SSSEEEEEEEEEEEEEEEESS..SEEEEEEEEEE.EEE---B-TTEE.EEEEEEE.--.... CS
  Arrestin_C   2 dgkvsleaslpkkgyvpGetipvtvkid......n.dskkkvkkikvslvqhvdvcafnrsnkkeknvvak.sdsvkvtsaakdkletevelqiP.... 88 
                 d+ v+l +slp+ +y p + ++v vk+       n   k++++ki+vs+++ +++  ++++ ++  + +ak ++sv+  + +++ + +++ l++P    
  KHJ33223.1 185 DHLVTLGISLPRCSYGPMDIVSVYVKLSpnldwiNkARKVSIQKITVSIEEEITFNPEGDEPTRRVKEIAKhTHSVGA-RLPETGYMANLALTFPlkdp 282
                 7889**********************999888885366799******************************8888888.66666788899999998888 PP

                 ...........--B--.....---S---EEEEEEEEEEEEEEESSEEEEEEEEEEEEEB CS
  Arrestin_C  89 ...........eeltp.....ssarnvelikvsYklkvkltlsgsggelslelPivlgs 131
                            +++ p     s ++++ l+k++++l+vk+ ls  +++++l  Piv++ 
  KHJ33223.1 283 rnaidgfirrgKSAFPlllvsSFTTSSTLYKIDFYLRVKAYLS-GARDVTLRHPIVVCP 340
                 999999998884444445555666899****************.567*********975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       357  (0.0199119); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 3169.06
//
Query:       KHJ33224.1  [L=162]
Description: putative peptidyl-prolyl cis-trans isomerase-like 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.1e-49  167.9   0.0    2.4e-49  167.7   0.0    1.0  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.7   0.0   1.3e-53   2.4e-49       2     157 ..       3     154 ..       2     155 .. 0.92

  Alignments for each domain:
  == domain 1  score: 167.7 bits;  conditional E-value: 1.3e-53
  Pro_isomerase   2 vdietsskGrivieLfadkaPktvenFlklvkegfYdgttFhRvikgfmvqgGdptgktsageqekkggesi..raipdEitsklkh.krGalama 94 
                    v+++t+  G+i+ie+f +++Pkt+enFl+l+ +++Yd++ FhR+i++fmvq+G p +  +       gg si  ++++dEi+++l+h  rG+++ma
     KHJ33224.1   3 VTLNTN-CGNIKIEIFCESVPKTAENFLALCASNYYDNSPFHRLIPNFMVQTGAPPSMPK-------GGSSIweEPFEDEIRPTLRHnARGIVSMA 90 
                    688997.***********************************************999733.......222333369******99999899****** PP

  Pro_isomerase  95 rtgkepnsagsqFfItlkeaphldgkytvFGkVv..eGmdvvekiekvetde.erpkknvkivsae 157
                    ++g  p ++gsqFfI++++aphldgk+tvFG+V+  e++d++ kie++e+d+  rpkk++ki+s++
     KHJ33224.1  91 NKG--PATNGSQFFICFQKAPHLDGKNTVFGHVIgdESLDTLAKIEETEVDKkYRPKKEIKIISVT 154
                    *97..8*********************************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1206.01
//
Query:       KHJ33225.1  [L=496]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-05   24.9   8.6    2.9e-05   24.1   8.6    1.4  1  CFEM      CFEM domain


Domain annotation for each model (and alignments):
>> CFEM  CFEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   8.6   1.6e-09   2.9e-05       3      66 .]       5      71 ..       3      71 .. 0.86

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 1.6e-09
                TTS-GGGTCGGG---TTSS..S-...TT-HH.HHHH-HHHHHHHHHHHHHH--THHHHHHHHHHHHHHH CS
        CFEM  3 salPkCaqdClaeavkkss.gCa...kddta.CiCtnaklqseitdCvtaaCtaeealaavnaasslCa 66
                 +lPkC   C+   +  s+  C+    +++  C+C+++k+q+++++C+  +C++ e +   ++ + +Ca
  KHJ33225.1  5 GKLPKCCMGCVLPIL--SDlHCNmgnVTELViCFCSDSKVQKNVSECTGTNCSNRELKHSEELLQVICA 71
                689**********99..7778*9543334448*************************999999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       910  (0.0507558); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3476.53
//
Query:       KHJ33226.1  [L=181]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       207  (0.0115455); expected 358.6 (0.02)
Passed bias filter:                      205  (0.011434); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1413.79
//
Query:       KHJ33227.1  [L=104]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        2.1    8.3   6.5        3.6    7.5   6.5    1.7  1  zf-CCHC_6  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   6.5    0.0002       3.6       3      19 ..      12      27 ..      10      63 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0002
   zf-CCHC_6  3 KCknCGAFGHtarSkrC 19
                KC+nCG   H+  S+rC
  KHJ33227.1 12 KCRNCGG-PHRSDSRRC 27
                9*****9.5******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1547  (0.0862848); expected 358.6 (0.02)
Passed bias filter:                      674  (0.0375927); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 759.83
//
Query:       KHJ33228.1  [L=191]
Description: hypothetical protein EV44_g0467 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1486.58
//
Query:       KHJ33229.1  [L=125]
Description: putative simnilar to protein from sclerotinia sclerotiorum [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.19s 00:00:00.55 Elapsed: 00:00:00.34
# Mc/sec: 1094.60
//
Query:       KHJ33230.1  [L=427]
Description: hypothetical protein EV44_g3331 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.38   11.2   2.2         69    4.0   2.2    3.3  1  KIF1B     Kinesin protein 1B
        9.7    6.8  29.8        9.2    6.9   3.7    3.4  3  Stc1      Stc1 domain


Domain annotation for each model (and alignments):
>> KIF1B  Kinesin protein 1B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   2.2    0.0077        69      34      40 ..     380     398 ..     296     404 .. 0.66

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0077
       KIF1B  34 s............DPFyEs 40 
                 +            DPF Es
  KHJ33230.1 380 QnnvvqsqsrfqiDPFLES 398
                 1122233345555777777 PP

>> Stc1  Stc1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   6.2     0.015   1.3e+02      54      84 ..      10      40 ..       3      41 .. 0.93
   2 ?    6.9   3.7     0.001       9.2      46      84 ..     113     150 ..      98     151 .. 0.88
   3 ?    6.7   9.4    0.0012        11       1      84 [.     145     225 ..     145     226 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.015
                E-SSS--EEESTTS-HHHHHS.SS---HHHH CS
        Stc1 54 eCsaCqktkpldeFsksqrrkpdaarCkdCv 84
                +Cs C+k ++ + F +++ ++   ++C++C 
  KHJ33230.1 10 TCSRCRKNLSPSCFLRNEECNLYYKTCIECR 40
                8********************99999****5 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.001
                 S-----EEE-SSS--EEESTTS-HHHHHS.SS---HHHH CS
        Stc1  46 takqateleCsaCqktkpldeFsksqrrkpdaarCkdCv 84 
                 t+++   ++C+ C+k  + d F++ +r k   ++C +C 
  KHJ33230.1 113 TSNNSNLVHCKGCKKNCAPDLFTNLTRGK-TFKQCGNCR 150
                 55566679*********************.8899*9996 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0012
                 E-SSS--EEETTTS-HHHHHTTTTEEEE-S-.......----TTTS-----EEE-SSS--EEESTTS-HHHHHS.SS---HHHH CS
        Stc1   1 kCkeckkkkplseFSkkqlkklekklaeekakvkkakskikCkectakqateleCsaCqktkpldeFsksqrrkpdaarCkdCv 84 
                 +C +c++ k+  +  ++ l++ ++++    +++ +++++++ +    +++t + C  C++    ++F++++ +   +a+C +C 
  KHJ33230.1 145 QCGNCRQRKNSRRHPESLLAQPNENRLY--STILPVNAQTNITLNEVSETTTILCRKCKRNCVPESFANATSNL-PHATCFNCR 225
                 5999999999999999999988555543..4566666666666666667799*******************999.99******5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (427 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1015  (0.0566122); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3203.13
//
Query:       KHJ33231.1  [L=496]
Description: putative duf1776-domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.8e-82  275.6   0.5    6.1e-82  275.3   0.5    1.1  1  DUF1776       Fungal family of unknown function (DUF1776)
     0.0055   16.7   0.1      0.013   15.5   0.1    1.5  1  P_proprotein  Proprotein convertase P-domain


Domain annotation for each model (and alignments):
>> DUF1776  Fungal family of unknown function (DUF1776)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  275.3   0.5   6.8e-86   6.1e-82       2     296 .]     124     426 ..     123     426 .. 0.96

  Alignments for each domain:
  == domain 1  score: 275.3 bits;  conditional E-value: 6.8e-86
     DUF1776   2 rkdvvlvlGsptePltRsialDLerrGFiVfvtvesaeeeklvesedredIrplsvdd.dpssieasleefaqslesphvalpgakphvlrLkgvilvP 99 
                 r +vv+++G+p eP tRsi+lDLerrGFiV+++ + +eee+ v++e+r+dI++l +d  +p ++++s+e+fa +l+sph+a+pgak h  +++++i++P
  KHJ33231.1 124 RLEVVVIAGQPGEPYTRSISLDLERRGFIVYIVCSTNEEERIVQNEARPDIKSLALDIrNPLNAKSSMERFAAYLQSPHAAFPGAKFHCYTMRSLIVIP 222
                 679*******************************************************9**************************************** PP

     DUF1776 100 slsyptgpietiplsswaselnerllspiltlqallplltsra.............kqkakiivvnpsissslnlpfhapEalvssalsalfevLkrel 185
                 ++ +pt pi+++ ls++ ++ln+rll+pi+++q++lpl+++ +               k+ i+v++psi+ss+n++fh pEa + sals+++ vL++e+
  KHJ33231.1 223 TSRFPTIPIAKLDLSTLSDLLNTRLLQPIIMIQNFLPLFQN-LpfthsdikseillDSKPSILVLTPSIISSINPAFHLPEASITSALSSFTSVLEQEV 320
                 ****************************************7.5699**********9****************************************** PP

     DUF1776 186 rphnidvtqikLGnldlan.gsqsnskiasvagsevlsWsesaralygpnyvsilskaisaksirrgsslreLhnalfdllegsskkrvvyvGkgarly 283
                  p+ i+vt+++LGn+dl+  +++ ++   + + +e l W+e++r+ yg ny  + s+     + ++ s lr L++a++d+++ + k+++++vG g+ +y
  KHJ33231.1 321 TPLSISVTHLQLGNFDLSLfSPHNRKITIQSQRAETLQWDENTRNNYGRNYTVSTSN-----KWGNQSNLRVLNKAVLDAMY-NQKGGIMRVGSGSVIY 413
                 *****************9855555555667778889******************996.....66699***************.889************* PP

     DUF1776 284 slvgkllpeglve 296
                 +++gk++p++l++
  KHJ33231.1 414 GFIGKWVPRSLIS 426
                 *********9985 PP

>> P_proprotein  Proprotein convertase P-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   1.4e-06     0.013       6      60 ..     323     383 ..     319     388 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.4e-06
                   EEEEEEESSGGGEEEEEE-TTS-EEEEE---TT....---SS-EEEEEEE..ESTTTTS-- CS
  P_proprotein   6 vsvnithtrrgdlritLvsPsGtrsvLlnrrgk....dksrsgfldwtfm..sthlwgera 60 
                   +s+++th  +g+  + L+sP + +++++++r +    d++ ++++  +++  + + wg+++
    KHJ33231.1 323 LSISVTHLQLGNFDLSLFSPHNRKITIQSQRAEtlqwDENTRNNYGRNYTvsTSNKWGNQS 383
                   57999**************************999999666666665555533667787765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 3796.27
//
Query:       KHJ33232.1  [L=343]
Description: putative dna damage response protein wss1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.1e-58  195.5   0.1    1.6e-57  194.7   0.1    1.4  1  WLM       WLM domain
    0.00026   20.3   4.4    0.00061   19.0   4.4    1.6  1  zf-RanBP  Zn-finger in Ran binding protein and others
  ------ inclusion threshold ------
       0.11   12.5   0.6       0.22   11.5   0.6    1.5  1  DUF45     Protein of unknown function DUF45


Domain annotation for each model (and alignments):
>> WLM  WLM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.7   0.1   2.7e-61   1.6e-57       3     189 ..       8     197 ..       6     199 .. 0.85

  Alignments for each domain:
  == domain 1  score: 194.7 bits;  conditional E-value: 2.7e-61
         WLM   3 iseikvlkkkpekeaalellkriakdvqpimkkhkfkVglLtElaPkeanlLGlNvnkGekieLrLRtdkddkeflpyesimgtllHELaHnvygpHda 101
                 is++++l k p++++a  ++k++a+ v+pim+ + ++Vg+LtE++P+++nlLGlN  +G+ki+LrLR ++d+++flp+e+i +t+lHEL+HnvygpHd+
  KHJ33232.1   8 ISRYAHLDKFPREKEAIFIIKKVASLVRPIMRARSWRVGTLTEFYPEQHNLLGLNYGQGNKICLRLRYAEDKNRFLPFENITDTMLHELCHNVYGPHDE 106
                 7899*********************************************************************************************** PP

         WLM 102 kFyallkeLekeveelkakGlk.egflkeGkrlggkevrnksa.....eeeeekealekagiagkgarlGgrseektrskasareliaaAaerR 189
                 kF+al+++L+ e+eel +kG++ egfl+eG+rlgg++  +  +     ++++ ++++++ + +++ +r             ++r+ +++A +rR
  KHJ33232.1 107 KFHALWDQLRVELEELVSKGYTgEGFLSEGHRLGGHKLGSGFDprvvaRRAAAAAEQRQMRARNSYQRFNNM---AIPVLSDMRNFVLSALQRR 197
                 *************************************99887766543333333333333333333333322...3356677777777777777 PP

>> zf-RanBP  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   4.4     1e-07   0.00061       5      25 ..     308     328 ..     306     333 .. 0.91

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1e-07
                 EE-SSS--EEESSSSB-TTT- CS
    zf-RanBP   5 WdCskClvqNfawstkCvaCq 25 
                 W C++C++qN+   ++C+aC 
  KHJ33232.1 308 WSCPTCTLQNPMNFLACEACN 328
                 ********************6 PP

>> DUF45  Protein of unknown function DUF45
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.6   3.7e-05      0.22     170     193 ..      92     115 ..      82     124 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.7e-05
       DUF45 170 vvHElaHlleknHskrFwalvekl 193
                 ++HEl+H ++  H ++F al ++l
  KHJ33232.1  92 MLHELCHNVYGPHDEKFHALWDQL 115
                 68*****************98886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2712.47
//
Query:       KHJ33233.1  [L=147]
Description: putative mynd domain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-09   35.5  16.0    1.5e-08   34.6  15.1    1.8  2  zf-MYND   MYND finger
  ------ inclusion threshold ------
      0.081   10.8   6.0      0.089   10.7   6.0    1.0  1  PolC_DP2  DNA polymerase II large subunit DP2


Domain annotation for each model (and alignments):
>> zf-MYND  MYND finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.3     0.011        95       8      17 ..      60      69 ..      56      73 .. 0.80
   2 !   34.6  15.1   1.7e-12   1.5e-08       1      38 []      65     106 ..      65     106 .. 0.92

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.011
                B-SCE-TTTS CS
     zf-MYND  8 ealkkCagCk 17
                ++ kkCa C+
  KHJ33233.1 60 PERKKCASCN 69
                5678*****6 PP

  == domain 2  score: 34.6 bits;  conditional E-value: 1.7e-12
                 -TTT--.....B-SCE-TTTS-SEESSHHHHHHCHHHHCCCH CS
     zf-MYND   1 CavCgk....aealkkCagCksvfYCskeCqradwksHkteC 38 
                 Ca+C+     + +lkkC++C+sv YC +eCq+ d k+Hk+ C
  KHJ33233.1  65 CASCNItstdNIPLKKCSKCQSVAYCTRECQKIDFKRHKKTC 106
                 999999777677777**************************9 PP

>> PolC_DP2  DNA polymerase II large subunit DP2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   6.0   9.9e-06     0.089     613     688 ..      57     134 ..      27     142 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 9.9e-06
    PolC_DP2 613 eveiarrkCkkCgketlea....rCeeCgekteeklvCkkceeeveeekcekcekeakavkkkkidlkellekaleklge 688
                 ++  +r+kC +C+ +++ +    +C++C++    + +C+k++ + ++++c  + +  ++  + ++++++  ++  ++++e
  KHJ33233.1  57 SITPERKKCASCNITSTDNiplkKCSKCQSVAYCTRECQKIDFKRHKKTCVTAAQLYSS--TANFNMETRNKNGSKNMKE 134
                 6677899******99986433338********9999***99999999888776665554..4555666666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1341  (0.074795); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1185.28
//
Query:       KHJ33234.1  [L=555]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       853  (0.0475766); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 4368.42
//
Query:       KHJ33235.1  [L=252]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.7e-12   45.1   0.2    1.8e-11   43.9   0.0    1.6  2  Exo_endo_phos_2  Endonuclease-reverse transcriptase
  ------ inclusion threshold ------
       0.76    9.5   5.2        1.7    8.4   5.2    1.6  1  DNA_RNApol_7kD   DNA directed RNA polymerase, 7 kDa subunit
        1.4    9.1  11.9        3.6    7.8   3.0    2.6  2  zf-CCHC          Zinc knuckle
        5.3    6.6   8.9        7.6    6.1   0.9    2.9  3  zf-ribbon_3      zinc-ribbon domain
        5.4    7.5   9.1         14    6.2   9.1    1.7  1  MGC-24           Multi-glycosylated core protein 24 (MGC-24),


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       1.2   4.5e+03      18      25 ..      93     100 ..      74     116 .. 0.48
   2 !   43.9   0.0   4.9e-15   1.8e-11       3     119 .]     127     232 ..     126     232 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.2
  Exo_endo_phos_2  18 estlekll 25 
                      +s+l++ +
       KHJ33235.1  93 SSQLQENT 100
                      22222222 PP

  == domain 2  score: 43.9 bits;  conditional E-value: 4.9e-15
  Exo_endo_phos_2   3 iisvYippsdelenlestlekllselkspkiiilGDfNakhplWgsedtdssargeeLiefleehslsllnllksgptfkssngsstiDltlts 96 
                      +++vY  p+d      s++++ll+ +++ k+i +GDfN    +W+ + ++   +gee++++ e+++l++l   +  pt++     +t+Dl++t+
       KHJ33235.1 127 FLNVYKAPHD-----PSAVQSLLDWKPTLKTIAIGDFNSVYWAWKPSANSYYGQGEEIERWAEKYNLTCLIVGE--PTHRV---GNTLDLVFTN 210
                      6789999999.....778888888887669***************977777*****************777766..66633...689******* PP

  Exo_endo_phos_2  97 dnlalskleleeedlgSDHrpil 119
                       + +   +  +ee ++ DH+pi+
       KHJ33235.1 211 ISETMA-WAGTEECMTNDHLPIC 232
                      ****99.99999*********96 PP

>> DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   5.2   0.00047       1.7       3      24 ..       9      32 ..       8      37 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00047
                    -SSS--B----SS..S----SSS- CS
  DNA_RNApol_7kD  3 CgeCgaevslkkg..dpiRCkeCG 24
                    Cg+Cg+++  k +  ++ +C++CG
      KHJ33235.1  9 CGNCGSSNHTKDNclAATKCRNCG 32
                    *******9977765599******9 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   3.0     0.001       3.6       2      16 ..       8      22 ..       7      22 .. 0.92
   2 ?    5.7   1.6    0.0046        16       2       9 ..      27      34 ..      27      34 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.001
                CTSSSSSSSSTTTTS CS
     zf-CCHC  2 kCynCGepGHiardC 16
                 C nCG+  H + +C
  KHJ33235.1  8 SCGNCGSSNHTKDNC 22
                699**********99 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0046
                CTSSSSSS CS
     zf-CCHC  2 kCynCGep 9 
                kC+nCG+p
  KHJ33235.1 27 KCRNCGGP 34
                7*****86 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.5    0.0054        19      15      24 ..       5      14 ..       4      16 .. 0.82
   2 ?    6.1   0.9    0.0021       7.6      16      25 ..      25      34 ..      24      42 .. 0.78
   3 ?   -2.6   0.0       1.1     4e+03      20      23 ..     230     233 ..     230     235 .. 0.57

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0054
  zf-ribbon_3 15 ddnvCpyCGt 24
                 +++ C +CG+
   KHJ33235.1  5 RAPSCGNCGS 14
                 7889999996 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0021
  zf-ribbon_3 16 dnvCpyCGtk 25
                 +++C +CG++
   KHJ33235.1 25 ATKCRNCGGP 34
                 5788888875 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 1.1
  zf-ribbon_3  20 pyCG 23 
                  p CG
   KHJ33235.1 230 PICG 233
                  5566 PP

>> MGC-24  Multi-glycosylated core protein 24 (MGC-24), sialomucin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   9.1    0.0038        14       1     112 [.       2     124 ..       2     131 .. 0.60

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0038
      MGC-24   1 eCkslesCesCveaesenstCvW.leCkgeekskcsenstvedCsvvnvtelcsaaskst...........pkptnstaktttkpss..tttstsvats 85 
                 +C++  sC +C  +++++++C+  ++C+   ++  +++s   +C +  + + ++++++             +   + +a+ ++ +++   ++ ts++ +
  KHJ33235.1   2 NCSRAPSCGNCGSSNHTKDNCLAaTKCR---NCGGPHRSDSRKCLARPTRSGAPTKEQMGiyrqagdreyqAVLRARAAEENAVSIEnmNAELTSSQLQ 97 
                 5999*****************8625777...66667777777788777776666666655555555443331112222222222222002222333355 PP

      MGC-24  86 gttnttvtptsqparkstFDaAsFiGG 112
                  +t+tt   ++     st Da s   G
  KHJ33235.1  98 ENTKTTDNIQASHVEDSTRDARSLFNG 124
                 557777777777778999999995544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (252 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1017  (0.0567237); expected 358.6 (0.02)
Passed bias filter:                      588  (0.032796); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1803.68
//
Query:       KHJ33236.1  [L=217]
Description: putative gtp-binding nuclear protein gsp1 ran [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-48  164.8   0.0    1.5e-48  164.5   0.0    1.1  1  Ras           Ras family
    7.9e-29  100.3   0.1      2e-28   99.0   0.0    1.6  2  Roc           Ras of Complex, Roc, domain of DAPkinase
    8.1e-11   41.7   0.0    1.1e-10   41.2   0.0    1.2  1  Arf           ADP-ribosylation factor family
    0.00061   19.2   0.0     0.0008   18.8   0.0    1.2  1  Gtr1_RagA     Gtr1/RagA G protein conserved region
    0.00082   19.4   0.0     0.0016   18.5   0.0    1.5  1  MMR_HSR1      50S ribosome-binding GTPase
     0.0025   18.2   0.1      0.018   15.4   0.1    2.1  1  RNA_helicase  RNA helicase
  ------ inclusion threshold ------
      0.023   14.2   0.1      0.041   13.3   0.1    1.3  1  Pox_A32       Poxvirus A32 protein
      0.034   13.3   1.9        1.6    7.8   0.1    2.6  3  G-alpha       G-protein alpha subunit
      0.035   13.6   0.0      0.062   12.8   0.0    1.3  1  AAA_7         P-loop containing dynein motor region
      0.052   13.3   0.1      0.089   12.5   0.1    1.4  1  AAA_24        AAA domain
      0.079   13.0   0.1       0.17   11.9   0.1    1.6  2  TsaE          Threonylcarbamoyl adenosine biosynthesis protei
      0.096   12.6   0.1        8.5    6.3   0.0    2.1  2  RsgA_GTPase   RsgA GTPase
       0.11   12.9   0.1        0.2   12.0   0.0    1.5  2  AAA_16        AAA ATPase domain
       0.12   12.7   0.0       0.22   11.8   0.0    1.5  1  ArgoMid       Mid domain of argonaute
       0.12   11.8   0.0        0.2   11.1   0.0    1.4  1  SRPRB         Signal recognition particle receptor beta subun
       0.12   12.5   0.2       0.22   11.7   0.2    1.4  1  AAA_33        AAA domain
       0.17   11.1   0.5       0.28   10.4   0.0    1.6  2  Septin        Septin


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.5   0.0   1.4e-51   1.5e-48       1     160 [.      12     168 ..      12     170 .. 0.98

  Alignments for each domain:
  == domain 1  score: 164.5 bits;  conditional E-value: 1.4e-51
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 KlvlvGd+++GKt+++ r+ +++F+++y++T+gv+ +   ++++  ++++++wDTAGqe+f  lr+ yy ++++ ++++d+tsr +++nv +w++++ r
  KHJ33236.1  12 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLGFSTNYGNIQFDVWDTAGQEKFGGLRDGYYINGNCGIIMFDVTSRITYKNVPNWHRDLVR 110
                 99************************************************************************************************* PP

                 HSTTTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras 100 vaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellrei 160
                 v+e n+pivL GnKvD++e r+v++++   ++++++l+++++SAk+n+n+e+ f  l+r++
  KHJ33236.1 111 VCE-NIPIVLTGNKVDVKE-RKVKAKTIT-FHRKKNLQYYDISAKSNYNFEKPFLWLARKL 168
                 ***.7*************6.***998865.***************************9986 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.0   0.0   1.9e-31     2e-28       1     119 [.      12     125 ..      12     126 .. 0.91
   2 ?   -1.9   0.0       3.5   3.7e+03      54      70 ..     140     156 ..     127     167 .. 0.61

  Alignments for each domain:
  == domain 1  score: 99.0 bits;  conditional E-value: 1.9e-31
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE..GH.HHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd..sr.ssenlk 96 
                 K+vlvGd+g+GKt+++kr+++++f++k+ +t+gv+++   +++        +  ++++++WDtaGqe+f  l++ y+ + ++ i+++d  sr +++n+ 
  KHJ33236.1  12 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLGFST--------NYGNIQFDVWDTAGQEKFGGLRDGYYINGNCGIIMFDvtSRiTYKNVP 102
                 99**********************************9876532........235799*******************************65334679*** PP

                 HHHHHHHHHCSSS-EEEEEE-TT CS
         Roc  97 eWlkelkkvagkspvilvgnkiD 119
                 +W ++l +v++++p++l gnk+D
  KHJ33236.1 103 NWHRDLVRVCENIPIVLTGNKVD 125
                 **********************9 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 3.5
                 TCEEEEEEEE-SGGCTT CS
         Roc  54 kkvklniWDtaGqerfr 70 
                 +k +l+ +D++ + +++
  KHJ33236.1 140 RKKNLQYYDISAKSNYN 156
                 33467888877776665 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.0     1e-13   1.1e-10      15     140 ..      11     139 ..       3     167 .. 0.82

  Alignments for each domain:
  == domain 1  score: 41.2 bits;  conditional E-value: 1e-13
                 EEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEEEEEE....EETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHC CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvt.tvPTigfnveel....eiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkall 108
                 ++++l+G  ++GKtT +k+  ++e+++  + T+g +v+ l    ++ n++f vwD  Gqek   l + Y+ + +  i + D++ r   ++  +  + l+
  KHJ33236.1  11 FKLVLVGDGGTGKTTFVKRHLTGEFEKkYIATLGVEVHPLgfstNYGNIQFDVWDTAGQEKFGGLRDGYYINGNCGIIMFDVTSRITYKNVPNWHRDLV 109
                 799***************999998876489********873333579***********************************99998888888888888 PP

                 TSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHT CS
         Arf 109 eeeelkevallvlaNKqDlpealseeelrell 140
                 +    +++++++ +NK D++e   +++  +  
  KHJ33236.1 110 RV--CENIPIVLTGNKVDVKERKVKAKTITFH 139
                 76..5689***********9877665544333 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   7.6e-07    0.0008       1     130 [.      12     133 ..      12     162 .. 0.71

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 7.6e-07
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsi.iFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletl 98 
                 k++L+G +g GKt+  +  +  ++  + + +lg+ ++    +  ++gn+++++wD  Gqe+f      ++  +i  n+g+++  fDv+sr   +++ ++
  KHJ33236.1  12 KLVLVGDGGTGKTTFVKRhLTGEFEKKYIATLGVEVHPLGFST-NYGNIQFDVWDTAGQEKFGGL---RDGYYINGNCGIIM--FDVTSRITYKNVPNW 104
                 799**********987661556677788889999888877776.79****************987...69999*9***9876..699977444443333 PP

   Gtr1_RagA  99 keilealrqyspeakvfvlihKmDliqedere 130
                     + l+++ +++ +    +K+D  +++ ++
  KHJ33236.1 105 ---HRDLVRVCENIPIVLTGNKVDVKERKVKA 133
                 ...33444445555555555666665554444 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   1.5e-06    0.0016       2      93 ..      13     101 ..      12     123 .. 0.72

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 1.5e-06
                 EEEEESTTSSHHHHHHH.HHTS.TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHH.HHHHHHHHHHCTSEEEEEEETTTTCSHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLina.ltge.kaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseek.glgkaflaleeadlillvvdaseeklkpl 93 
                  ++vG   +GK+t++++ ltge + +  ++ g+  ++  +  ++++ ++ ++Dt+G  e    +  gl++ +  + ++ +i++ v ++  ++k++
  KHJ33236.1  13 LVLVGDGGTGKTTFVKRhLTGEfEKKYIATLGVEVHPLGFSTNYGNIQFDVWDTAG-QE----KFgGLRDGYYINGNCGIIMFDVTSR-ITYKNV 101
                 689************8736788778899999******999999999**********.54....4469999999888888888877744.334333 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   1.7e-05     0.018       2     101 ..      14     136 ..      13     139 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.7e-05
  RNA_helicase   2 wlyGpsgeGKStlake.Lakallkkl..................klkkkdsvysrnpeddfw...dgYt..gqevvvidDfgqvkdee.npsdlael 73 
                   +l+G+ g+GK+t++k+ L+ +++kk+                  + +   +v+  + +++f    dgY   g+  ++++D+ ++ + +  p++  +l
    KHJ33236.1  14 VLVGDGGTGKTTFVKRhLTGEFEKKYiatlgvevhplgfstnygNIQ--FDVWDTAGQEKFGglrDGYYinGNCGIIMFDVTSRITYKnVPNWHRDL 108
                   799***********9878888888889***********999875222..3333333333332334999877888899*****9999888999***** PP

  RNA_helicase  74 irlvsstpyplnmasleekgtlftSkvv 101
                   +r++++ p+ l   +++ k++ +++k +
    KHJ33236.1 109 VRVCENIPIVLTGNKVDVKERKVKAKTI 136
                   *******************999999887 PP

>> Pox_A32  Poxvirus A32 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   3.9e-05     0.041      13      35 ..      10      32 ..       6      44 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.9e-05
     Pox_A32 13 pFrlalvGgsGsGktvyLlsLlr 35
                 F+l+lvG  G Gkt++++  l+
  KHJ33236.1 10 TFKLVLVGDGGTGKTTFVKRHLT 32
                6****************997554 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.1    0.0015       1.6      23      42 ..      10      29 ..       2      41 .. 0.88
   2 ?   -1.2   0.0      0.83   8.8e+02     186     213 ..      40      70 ..      34      71 .. 0.81
   3 ?    4.1   0.1     0.021        22     267     294 ..     112     139 ..     106     172 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0015
                EEEEEEEESTTSSHHHHHHH CS
     G-alpha 23 evkllllGqseSGKsTilkq 42
                ++kl+l+G ++ GK+T++k 
  KHJ33236.1 10 TFKLVLVGDGGTGKTTFVKR 29
                579**************995 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.83
                 ----SEEEEEEEC....T-TEEEEEEEE-SSH CS
     G-alpha 186 lktvGisetkfev....dsklefrivdvgGqr 213
                 + t+G++ + + +    + +++f ++d++Gq 
  KHJ33236.1  40 IATLGVEVHPLGFstnyG-NIQFDVWDTAGQE 70 
                 678999999987777756.899********96 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.021
                 GTTSEEEEEEE-HHHHHHHCCCS-GGGC CS
     G-alpha 267 lkntpiiLflnKlDileeKlkkgklsky 294
                  +n+pi+L  nK+D+ e+K+k + ++ +
  KHJ33236.1 112 CENIPIVLTGNKVDVKERKVKAKTITFH 139
                 689*****************88866553 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   5.9e-05     0.062      35      63 ..      12      40 ..       9      50 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 5.9e-05
       AAA_7 35 pvllvGptGtGKtviikd.llkkldkekyl 63
                +++lvG+ GtGKt+ +k+ l+ +++ +ky+
  KHJ33236.1 12 KLVLVGDGGTGKTTFVKRhLTGEFE-KKYI 40
                5789**************6666666.4444 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   8.4e-05     0.089       4      22 ..      12      30 ..      10      82 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 8.4e-05
      AAA_24  4 kiliyGpsgiGKTtlakel 22
                k++++G+ g+GKTt++k+ 
  KHJ33236.1 12 KLVLVGDGGTGKTTFVKRH 30
                899*************986 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   0.00016      0.17      21      41 ..      12      32 ..       1      41 [. 0.78
   2 ?   -3.6   0.0       9.8     1e+04      67      75 ..     104     112 ..      97     127 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00016
                EEEEEESTTSSHHHHHHHHHH CS
        TsaE 21 vilLeGdLGaGKTtlvrglak 41
                 ++L Gd G+GKTt+v+  + 
  KHJ33236.1 12 KLVLVGDGGTGKTTFVKRHLT 32
                389*************98665 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 9.8
                 EEEE-TT-S CS
        TsaE  67 yHfDlYRle 75 
                 +H Dl R+ 
  KHJ33236.1 104 WHRDLVRVC 112
                 788887774 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0     0.008       8.5     102     118 ..      13      29 ..       3      45 .. 0.81
   2 ?    4.4   0.0     0.031        32      45      92 ..     113     159 ..      92     170 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.008
                  EEEECSTTSSHHHHHHH CS
  RsgA_GTPase 102 svlvGqSGvGKStLina 118
                   vlvG  G GK+t++++
   KHJ33236.1  13 LVLVGDGGTGKTTFVKR 29 
                  69************975 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.031
                  TT-EEEEEEE-GGG--HHHHHHHHHHHHHHTTSEEEE--TTTHTTHHH CS
  RsgA_GTPase  45 kgiepvivlnKiDlleeeeeleelkeelealgyevllvsaktkeglee 92 
                  ++i++v+  nK+D+ e++    ++ +  ++ +++ + +sak++ ++e+
   KHJ33236.1 113 ENIPIVLTGNKVDVKERKV-KAKTITFHRKKNLQYYDISAKSNYNFEK 159
                  68999*********99999.6666777788889999999998887776 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00019       0.2      27      54 ..      13      41 ..       9      85 .. 0.82
   2 ?   -2.9   0.0       7.5   7.9e+03      98     104 ..     190     196 ..     138     212 .. 0.57

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00019
      AAA_16 27 vllsGesGvGKsslv.rellralekdggi 54
                ++l+G+ G+GK++ v r+l  ++ek+++ 
  KHJ33236.1 13 LVLVGDGGTGKTTFVkRHLTGEFEKKYIA 41
                689************77777788888543 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 7.5
      AAA_16  98 rekleea 104
                 +++l+++
  KHJ33236.1 190 DAQLLAS 196
                 2222222 PP

>> ArgoMid  Mid domain of argonaute
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0    0.0002      0.22      23      63 ..      84     124 ..      80     149 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.0002
     ArgoMid  23 kWAilcfasqrkvkenkledfikqlvkiskdvgisleekpe 63 
                 ++ i++f+ ++++ ++++ +  + lv++++++ i l++++ 
  KHJ33236.1  84 NCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLTGNKV 124
                 5789****************************999998765 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00019       0.2       6      96 ..      13     105 ..       9     145 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00019
                 EEEE-STTSSHHHHHHHHHHSS---B---SS-EEETTG......GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHH CS
       SRPRB   6 vllvGlsdsGKTslftrLttdsvkktvtSqessaalkv...ksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevA 96 
                 ++lvG   +GKT++ +r +t++++k +++     ++ +   ++  + ++++ D  G+ek+   l + +  + +   ++f v S i  k+v +  
  KHJ33236.1  13 LVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLgfsTNYGNIQFDVWDTAGQEKFG-GLRDGYYINGNCGIIMFDVTSRITYKNVPNWH 105
                 789******************999999887433333333356778899***********96.58888888888888999999999999987644 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   0.00021      0.22       3      20 ..      14      31 ..      13      44 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00021
      AAA_33  3 llvGlpGsGKstlaerll 20
                +lvG  G+GK+t+++r+l
  KHJ33236.1 14 VLVGDGGTGKTTFVKRHL 31
                789*************98 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00026      0.28       4      25 ..      10      31 ..       8      68 .. 0.87
   2 ?   -2.2   0.1       1.9     2e+03     142     181 ..     112     149 ..     105     160 .. 0.57

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00026
                EEEEEEEEBTTSSCCCCCCTTS CS
      Septin  4 eftlmvvGesglGkttlintlf 25
                +f l++vG+ g+Gktt+++  +
  KHJ33236.1 10 TFKLVLVGDGGTGKTTFVKRHL 31
                699***************8655 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.9
                 S-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT------- CS
      Septin 142 vnliPviaKaDtltkeElkefKkkireeleeeeikiyklp 181
                 +  iP++   + +  +E k   k+i +  +++++++y+  
  KHJ33236.1 112 CENIPIVLTGNKVDVKERKVKAKTI-TFHRKKNLQYYD-I 149
                 5556777666666666665444444.444666777776.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       484  (0.0269954); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1562.83
//
Query:       KHJ33237.1  [L=143]
Description: hypothetical protein EV44_g1974 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.06   13.9   0.1       0.14   12.7   0.1    1.7  1  RHS_repeat  RHS Repeat


Domain annotation for each model (and alignments):
>> RHS_repeat  RHS Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   7.9e-06      0.14      19      37 ..      16      34 ..      13      35 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 7.9e-06
  RHS_repeat 19 tYtYDaqGrlttlTdpdGr 37
                 ++Y+++G++t+lT+++++
  KHJ33237.1 16 KLRYNERGNPTGLTTAQTT 34
                589*************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1127.30
//
Query:       KHJ33238.1  [L=949]
Description: putative serine threonine protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.3e-69  231.9   0.1    1.4e-68  231.1   0.1    1.4  1  Pkinase         Protein kinase domain
      8e-40  136.7   0.1    1.1e-39  136.2   0.1    1.2  1  Pkinase_Tyr     Protein tyrosine kinase
    3.6e-12   46.2   0.0    1.9e-09   37.2   0.0    2.2  2  Kinase-like     Kinase-like
    1.9e-11   44.0   0.2    4.4e-05   23.6   0.0    3.0  2  POLO_box        POLO box duplicated region
     0.0043   16.4   0.0     0.0083   15.5   0.0    1.4  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0065   15.5   0.1     0.0065   15.5   0.1    2.0  2  Haspin_kinase   Haspin like kinase domain
  ------ inclusion threshold ------
       0.12   11.1   0.0       0.12   11.1   0.0    2.0  3  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.1   0.1   5.4e-72   1.4e-68       1     264 []      61     323 ..      61     323 .. 0.91

  Alignments for each domain:
  == domain 1  score: 231.1 bits;  conditional E-value: 5.4e-72
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                 y++ + lG+G+f+++y++ +++t +++A+K++k +  +kk+e+k+++E++i+ k++  niv++ ++f+ ++  y+vle++++g+l+d++++++ ++e e
  KHJ33238.1  61 YKTGQLLGRGGFAVCYEGQNTATYQKYALKIVKSHMPQKKMEQKFQTELQIHSKMNQANIVEFHKAFSYQKCTYIVLELCPNGSLMDMVKKRKYVTEPE 159
                 678999********************************************************************************************* PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.....BCTTTSCGGGS-HHHH..TTSCBSHHHHHHHHHHHHHHHH CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.....ltsfvgtseYlAPEvl..keneyskkvDvWslGvilyell 191
                 +++++ q++ +++y+H kgiiHrDlK  Ni++d++ ++K++DFGla+ l s+++      t+ +gt++Y+APE+l  ++ +++++vD+WslG+i++ +l
  KHJ33238.1 160 VRFWTVQMAGAIKYMHGKGIIHRDLKMGNIFLDKNMNVKVGDFGLAALLMSGKDlqacrRTTLCGTPNYIAPEILskDKGGHDHAVDIWSLGIIIFAML 258
                 *********************************999*****************99********************8555778***************** PP

                 HSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS....-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 192 tgkppfsgekgkekvekeldqlekilkilgetkeklpeasei....seeakdllkkllkkdpkkRltaeellqhpyl 264
                 tgkppf++ + +e +++  ++           +  +p+ ++     see kdl+++ll+  p++R+  ++++qh ++
  KHJ33238.1 259 TGKPPFQSATADEIYRRARER-----------DYYWPKFNTSeniiSEETKDLVSELLQ-APQERPEPDKIVQHAFF 323
                 *******66665544443333...........34444444333346************8.69************998 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.2   0.1   4.5e-43   1.1e-39       3     257 ..      63     319 ..      61     321 .. 0.85

  Alignments for each domain:
  == domain 1  score: 136.2 bits;  conditional E-value: 4.5e-43
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH.HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee.keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekek 99 
                  +g+ lG+G f+  +eg+ +     + +k a+K++k+++ +++ ++++ +e++i +k+++ niv+++ + + ++ ++iv+e++++G+L ++++k+  + 
   KHJ33238.1  63 TGQLLGRGGFAVCYEGQNT----ATYQKYALKIVKSHMPQKKmEQKFQTELQIHSKMNQANIVEFHKAFSYQKCTYIVLELCPNGSLMDMVKKR--KY 154
                  6789************999....889999*****999888775899**********************************************98..88 PP

                  SBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE..EETTSSTSGGGGS-HHHHHHSE..EEHHHHHHHHHH CS
  Pkinase_Tyr 100 ltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey..vkkeeaklpvkWmapEslkekk..ftsksDvWsfGv 193
                  +t  ++  +++q+A +++y++ k ++Hrdl   N++l++n+ vk++DfGLa  +++ ++    ++++     +++apE+l++ k    ++ D+Ws G+
   KHJ33238.1 155 VTEPEVRFWTVQMAGAIKYMHGKGIIHRDLKMGNIFLDKNMNVKVGDFGLAALLMSGKDLqaCRRTTLCGTPNYIAPEILSKDKggHDHAVDIWSLGI 252
                  999999999*********************************************8877773344555556789********9998899********** PP

                  HHHHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BBTTS....BHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 194 llwEiftlgespypglkneevlekl.kegkrlekpekc....peelyelmkkcweedpeeRptfselve 257
                  +++ ++t g+ p+++ ++ e++++  ++++  +k ++     +ee ++l+++ + + p+eRp+  ++v+
   KHJ33238.1 253 IIFAMLT-GKPPFQSATADEIYRRArERDYYWPKFNTSeniiSEETKDLVSE-LLQAPQERPEPDKIVQ 319
                  *******.****************9555565554443300013344444444.4456888888777765 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0017       4.3      13      68 ..      60     113 ..      53     127 .. 0.85
   2 !   37.2   0.0   7.5e-13   1.9e-09     149     286 ..     163     310 ..     138     311 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0017
  Kinase-like  13 tlvrgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlkeqelairl 68 
                  t++ g+ll++g++ v++e ++ +t ++ a+k+  ++s+ ++k++e+  + el+i+ 
   KHJ33238.1  60 TYKTGQLLGRGGFAVCYEGQNTATYQKYALKI--VKSHMPQKKMEQKFQTELQIHS 113
                  7899**************************97..5778889999998888888876 PP

  == domain 2  score: 37.2 bits;  conditional E-value: 7.5e-13
  Kinase-like 149 lTlqlirlaanLqakglvhgkftvdnllldekgglmlggft..aLvragtkvvl.seve....kgfaPpEllgsrggytrknktkmthkldaWqlGlv 239
                   T+q+   + +++ kg++h +++  n++ld++  +++g+f+  aL   g+  ++   +       +  pE+l++        k    h++d W lG+ 
   KHJ33238.1 163 WTVQMAGAIKYMHGKGIIHRDLKMGNIFLDKNMNVKVGDFGlaALLMSGKDLQAcRRTTlcgtPNYIAPEILSK-------DKGGHDHAVDIWSLGII 253
                  5899999999****************************995449999**9999743333455556777788877.......555778*********** PP

  Kinase-like 240 iyriwclklPltlateeakeew.........kfklck.kipekvkaLlkkfLqlsqe 286
                  i+ +   k P++ at + +            kf+  +  i+e+ k L+ ++Lq +qe
   KHJ33238.1 254 IFAMLTGKPPFQSATADEIYRRarerdyywpKFNTSEnIISEETKDLVSELLQAPQE 310
                  ***********9988765544467888899*****995689************9998 PP

>> POLO_box  POLO box duplicated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.2   1.9e-06    0.0048       1      20 [.     606     625 ..     606     626 .. 0.94
   2 !   23.6   0.0   1.7e-08   4.4e-05      10      40 ..     777     827 ..     774     855 .. 0.71

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.9e-06
                 CTTSEEEEEETTS-EEEEET CS
    POLO_box   1 stkygigyqLsdgtvgVnFn 20 
                 ++kyg+gy Ls+g+vg  F+
  KHJ33238.1 606 TNKYGLGYILSNGSVGTIFK 625
                 79**************9995 PP

  == domain 2  score: 23.6 bits;  conditional E-value: 1.7e-08
                 ETTS-EEEEETTTEEEEEETTTTEEEEE-T....................T CS
    POLO_box  10 LsdgtvgVnFnDhtkiilspdgkavtyidr....................q 40 
                 + dg +++nF Dhtkiils+dgk  ++++                     +
  KHJ33238.1 777 FDDGHLQFNFPDHTKIILSADGKWCDFYHLsleaaqdlhekgvlspqaldE 827
                 579******************986655544355555555555555555555 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   3.2e-06    0.0083      98     155 ..     138     195 ..     114     213 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 3.2e-06
         Kdo  98 rlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqee 155
                 +l +  +L d+++k + + e   r    + + +i+ +h  g+ H+dl + ni+l+++ 
  KHJ33238.1 138 ELCPNGSLMDMVKKRKYVTEPEVRFWTVQMAGAIKYMHGKGIIHRDLKMGNIFLDKNM 195
                 466677888999884444444444444588999*********************9986 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   2.5e-06    0.0065     168     257 ..     117     208 ..      87     218 .. 0.72
   2 ?   -2.8   1.0      0.87   2.2e+03      55     146 ..     484     571 ..     437     578 .. 0.59

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.5e-06
  Haspin_kinase 168 qdkvlkek.....pdfyseqqlflvlllkdkGtdLeevklkswkqalsi.fwqi..vkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsR 255
                    q+     +       f  ++  ++vl+l  +G+ ++ vk +++ +  ++ fw +  +  ++    k    HRdL+++ni +dkn+nv + d+ l+ 
     KHJ33238.1 117 QA-----NivefhKAFSYQKCTYIVLELCPNGSLMDMVKKRKYVTEPEVrFWTVqmAGAIKYMHGK-GIIHRDLKMGNIFLDKNMNVKVGDFGLAA 206
                    33.....24444467777888899999999999999998888888777757855114445544444.578**********************9987 PP

  Haspin_kinase 256 le 257
                    l 
     KHJ33238.1 207 LL 208
                    76 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.87
  Haspin_kinase  55 dkikkklrnsesllslnsqeev..kdfdevilsqilelckikkilneadlasllndseklssevyqtkekdkevvlKviplevledvtiskels 146
                    +++    ++++s + ln++e+   +d ++ +  +++++ +i+ i ++++ +    +++ +s+e + + +k++   +Kv+p +  +d++ s++ +
     KHJ33238.1 484 NNAAFNISKKKSTYKLNKSEPEakQDVNDQLAVNMFNKLDINDIKRDHRREC---EANSISREPFSIFHKKDG--VKVVP-DSKPDFILSRLRR 571
                    3444455666666666666655566677777777777777744443333222...255566666666664433..46666.4666666666555 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       1.7   4.3e+03     154     193 ..      67     108 ..      62     126 .. 0.60
   2 ?   11.1   0.0   4.7e-05      0.12     325     399 ..     176     249 ..     168     257 .. 0.74
   3 ?   -3.0   1.3      0.93   2.4e+03     219     267 ..     453     501 ..     426     534 .. 0.49

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 1.7
  Pkinase_fungal 154 vgRg..TtcwrarkegergkeyvvKdsWrdaerk.sEaelLkk 193
                      gRg   +c++++++ +  ++y +K++     +k  E+++  +
      KHJ33238.1  67 LGRGgfAVCYEGQNTATY-QKYALKIVKSHMPQKkMEQKFQTE 108
                     566633478888886555.578888876544333356555444 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 4.7e-05
  Pkinase_fungal 325 kagiLHrDiSenNilitdskkegerkglLiDLDlakelsddsses..garertGTleFmaievlkgee..HsyrhDLES 399
                      +gi+HrD  ++Ni +      ++ +  + D+ la  l   +  +   + +  GT++++a e+l++ +  H +  D+ S
      KHJ33238.1 176 GKGIIHRDLKMGNIFLD-----KNMNVKVGDFGLAALLMSGKDLQacRRTTLCGTPNYIAPEILSKDKggHDHAVDIWS 249
                     689*************9.....4566677788887776643222211336678************86567998888766 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 0.93
  Pkinase_fungal 219 aeiRkgldvtkaekfrskrkvvsssssqelsskaevklkksesskkvek 267
                     +++R++ ++ + ++++s++   +++  +e +++a+ +  k++s  k +k
      KHJ33238.1 453 NSLRSSNRIGTTQRVKSQKLNSQAQIGEEKKNNAAFNISKKKSTYKLNK 501
                     4555555555554444433222222222233333333333333222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (949 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       835  (0.0465726); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.69u 0.23s 00:00:00.92 Elapsed: 00:00:00.38
# Mc/sec: 7506.24
//
Query:       KHJ33239.1  [L=977]
Description: putative aminopeptidase 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.2e-87  293.0   0.4    1.1e-86  291.2   0.0    2.1  2  ERAP1_C         ERAP1-like C-terminal domain
    1.6e-86  289.4   0.6    2.7e-86  288.7   0.6    1.4  1  Peptidase_M1    Peptidase family M1 domain
    1.5e-48  165.5   1.6    2.9e-48  164.5   0.6    1.9  2  Peptidase_M1_N  Peptidase M1 N-terminal domain


Domain annotation for each model (and alignments):
>> ERAP1_C  ERAP1-like C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.31   1.9e+03       4      17 ..     209     222 ..     208     242 .. 0.86
   2 !  291.2   0.0   1.9e-90   1.1e-86       1     314 [.     631     948 ..     631     949 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.31
                 ESGGG-SSSEEEE- CS
     ERAP1_C   4 lNdddtGyyrVnYd 17 
                 lNd + G+yr  Y 
  KHJ33239.1 209 LNDKMAGFYRSTYK 222
                 8*********9994 PP

  == domain 2  score: 291.2 bits;  conditional E-value: 1.9e-90
                 -EEESGGG-SSSEEEE-HHHHHHHHHHHHGGGS-HHHHHHHHHHHHHHHHTTSS-HHHHHHGGG.GGGG--SHHHHHHHHHHHHHHHHHHT.TST.THH CS
     ERAP1_C   1 lvllNdddtGyyrVnYdeeslaalleqllskklspldRaglisdafalaragelsaadlldlllgylanEtdylvwsqalsqlatlkslls.adp.lya 97 
                 ++++N+d++G yr++Y+ ++l++l++++++++l+++dRag+i+da+a a +g+ +++ +ldll+g+ ++E++++vws++ls+l++++s++  +d+ +++
  KHJ33239.1 631 FFKINADHSGIYRTSYSSQRLEKLGKAAKDGLLTVEDRAGMIADAAAVAASGYSKTSGVLDLLKGF-SEEKEFVVWSEILSRLSRIQSTWIfEDQqVRD 728
                 79************************999*************************************.8********************99985556*** PP

                 HHHHHHHHHHHHHHHHHHH..T.TTS-HHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHCSTT-.S-HHHHHHHHHHHHHHS-HHHHHHHHHHHHC-S CS
     ERAP1_C  98 alkaflrklleplaeklgw..epgeshldaqlrslllsaacaagdpevveearklfkawlegddl.ippdlrwavycalaanggeaewdallerykdts 193
                 +l++f r+l+++ a+k gw  ++++ h ++q++s+l++ a+ +gdp+ +++a+++f+++++gd + i+p++r++v+ +++++gg++e++++l+ yk+++
  KHJ33239.1 729 GLEKFQRDLVSQKAHKAGWifKESDGHIEQQMKSILFGSAGLSGDPDIIKAAQQMFAKFAQGDVSaIHPNIRGSVFGIVLKYGGKEEYESILKTYKNSK 827
                 *******************8656699*********************************9996555*****************************9988 PP

                 SHHHHHHHHHHHCC-S-HHHHHHHHHHCTTT..S-GGGHHHHHHHH.HSTTHHHHHHHHHHHCHCCHHHHTS.STSCHHHHHHHHHTT--SHHHHHHHH CS
     ERAP1_C 194 apsekeaalralaatpdpellerllnfvlesdevrnqdlrallaglannpegrellwefvkenwdalakrws.ggeildrivkgllpgftseeelaeie 291
                 +++e+++alr+l+  +dpel++r+l + + s+ev+ qd++ ++++l+++p+g ++l  +++enw++l++r++ g ++l+++v+++++ f+s+++l++ie
  KHJ33239.1 828 NSDERNTALRSLGRARDPELIKRTLSMPF-SNEVKEQDIYLPISALRSHPAGIQALYTWMTENWEELVRRLPpGLSMLGSVVSMCTSAFNSQADLERIE 925
                 88**************************9.99**************999**********************8345599********************* PP

                 HHHCHTT--GGGHHHHHHHHHHH CS
     ERAP1_C 292 affadkdtpglrrtlkqaletvr 314
                 +ff++k t+g++++l+q+l+++r
  KHJ33239.1 926 EFFSSKSTKGFDQSLAQSLDNIR 948
                 **********************8 PP

>> Peptidase_M1  Peptidase family M1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  288.7   0.6   4.5e-90   2.7e-86       1     218 []     340     557 ..     340     557 .. 0.99

  Alignments for each domain:
  == domain 1  score: 288.7 bits;  conditional E-value: 4.5e-90
                   HHHHHHHHHHHHHHHHHTS--SSSEEEEEEESSTTSSEEEETTEEEEEGGGC-SSTTTS-HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGGHHHHH CS
  Peptidase_M1   1 yalevtkkllefleeyfkvpYplpkldlvalpdfsagAMEnwglityreelllvdpenssesdkrsvaeviaHElaHqWfGnlVtmkwWddlwLnEG 97 
                   ++le ++++l+f+e++f+ ++plpk+d+va+pdf+agAMEnwglityr   l++d ++s ++ k++vaev+ HElaHqWfGnlVtm+ Wd lwLnEG
    KHJ33239.1 340 FSLELAARTLDFYEKKFDSNFPLPKMDMVAIPDFAAGAMENWGLITYRVVDLIFDDKTSGAAVKERVAEVVQHELAHQWFGNLVTMDFWDGLWLNEG 436
                   789********************************************************************************************** PP

                   HHHHHHHHHHHHHSCCCHCHHHHHHHCHHHHHHHHTSTTHHHSSGG-GSHHHHHHTSSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHCTTEEE CS
  Peptidase_M1  98 fatyleylildklepewevseqllleeveealsedaldeshpitqevekpseidevFdsiaYeKGasllrmlekllgeevFqkglksYlkefkykna 194
                   fat++++++++ ++pew+v+e+++++++++als d+l++shpi++ v++++e++++Fd+i+Y+KG+++lrm++k lge++F+kg++ Yl++++y+n+
    KHJ33239.1 437 FATWMSWYSCNTFYPEWKVWESYVTDNLQSALSLDSLRSSHPIEVPVKRADEVSQIFDAISYSKGSCVLRMISKHLGEDTFMKGIRLYLRKHAYGNT 533
                   ************************************************************************************************* PP

                   -HHHHHHHHHHCCCSCHHTHHHHH CS
  Peptidase_M1 195 etedlwdaleealnkdisevmdtw 218
                   +t dlwdal+ea+++d++++md w
    KHJ33239.1 534 QTGDLWDALSEASGEDVKNIMDIW 557
                   **********************99 PP

>> Peptidase_M1_N  Peptidase M1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.5   0.6   4.9e-52   2.9e-48       2     186 .]     116     305 ..     115     305 .. 0.89
   2 ?   -1.2   0.0      0.33   1.9e+03      95     110 ..     633     648 ..     565     653 .. 0.76

  Alignments for each domain:
  == domain 1  score: 164.5 bits;  conditional E-value: 4.9e-52
                     EEEEEEEEEEETTTTEEEEEEEEEEEESS-ECEEEEEESSEEEECEEEEECTTCTCEEEEEEEECTTTTCEEEEECCEEETTCEEEEEEEEEEE- CS
  Peptidase_M1_N   2 pehYdldlkidlkektfkGsvtitlqlkeatseivldakdlkiksvslsaevksesvkidfkieqkdeelltiklkeslqqtskytLeieyegel 96 
                     p+hYd++l++++k+ t++G ++i+l+++e++++i+l++ +l+i++ ++++ +   s +    ++++  +   ++++++l +  +++L+i+++g+l
      KHJ33239.1 116 PRHYDITLEPNFKDLTYDGFISIDLDVVEDSTSISLNTLELEIQDTKIFSGSDLIS-SSPAHNYDESIQTSKFSFEKPLPKGATAQLQIKFKGQL 209
                     99*****************************************9999994444444.3333455555555788899999999************* PP

                     BSSSSEEEEEEEEE.TSCEEEEEEEE-TTTTGGGTS-B--STTSEBEEEEEEEEETTSEEEESSECCCEEEET.....TCEEEEEEEEEESBEGG CS
  Peptidase_M1_N  97 ndklaGlykstYtd.kgekkvvvvTqfeatdARsafPCfDePsvKAtftisikapkeetalSnmpeeesekle.....ngqkiteFeqtpkmstY 185
                     ndk+aG+y+stY++ +g + v+++Tq+eatdAR+afPCfDeP+ KA+fti+++a+k+ t lSnm++ ++++ +       +k ++F+++p mstY
      KHJ33239.1 210 NDKMAGFYRSTYKNsDGSQGVLATTQMEATDARRAFPCFDEPALKAEFTITLIADKDLTCLSNMDVASQKDVKssisgTIKKAVKFNKSPLMSTY 304
                     **************88889**************************************************999966633334599*********** PP

                     G CS
  Peptidase_M1_N 186 L 186
                     L
      KHJ33239.1 305 L 305
                     9 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.33
                     E-BSSSSEEEEEEEEE CS
  Peptidase_M1_N  95 elndklaGlykstYtd 110
                     ++n +  G+y+++Y  
      KHJ33239.1 633 KINADHSGIYRTSYSS 648
                     5899999999999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (977 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 6841.07
//
Query:       KHJ33240.1  [L=236]
Description: putative 26s proteasome non-atpase regulatory subunit 9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.7e-27   92.9   0.2    1.3e-26   92.4   0.2    1.2  1  Nas2_N      Nas2 N_terminal domain
    2.5e-08   33.6   0.0    4.5e-08   32.8   0.0    1.5  1  PDZ_6       PDZ domain
    1.4e-07   31.9   0.0    3.2e-07   30.7   0.0    1.5  2  GRASP55_65  GRASP55/65 PDZ-like domain
    6.9e-07   29.5   0.0    1.4e-06   28.5   0.0    1.5  1  PDZ_2       PDZ domain
     0.0044   17.3   0.0      0.008   16.5   0.0    1.5  1  PDZ         PDZ domain


Domain annotation for each model (and alignments):
>> Nas2_N  Nas2 N_terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.4   0.2   3.5e-30   1.3e-26       2      79 .]      31     108 ..      30     108 .. 0.98

  Alignments for each domain:
  == domain 1  score: 92.4 bits;  conditional E-value: 3.5e-30
      Nas2_N   2 keLekkkdeiekeieelsevLesqnvgmdgplvDeegFPrsDidvvavrtaRnriiclqNDlkelmkeieealaelha 79 
                 ++L++kkd++e+ei++l  vL+s+nv+m++pl++ +g+Pr+D+dv+ +rt+R ri+ l NDlk+lm+ ie+++++++a
  KHJ33240.1  31 SQLQAKKDNLESEIRALGGVLDSHNVDMKTPLLTLDGYPRADLDVALIRTTRARINYLVNDLKDLMNIIEKRIHDHFA 108
                 79**************************************************************************96 PP

>> PDZ_6  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.0   1.3e-11   4.5e-08       2      56 .]     148     203 ..     147     203 .. 0.94

  Alignments for each domain:
  == domain 1  score: 32.8 bits;  conditional E-value: 1.3e-11
       PDZ_6   2 VtaVdpgsPAdrAGlrvGDiilsvNGqp.veglsladvaallrgsagesvvlvvrr 56 
                 V +V+++sPA+ AGl++GD+i s+  ++ +++  l+ +++ ++g+ ++ + l+v r
  KHJ33240.1 148 VNSVVENSPAASAGLQIGDLIKSFSYVNiTNHDGLKRLSECVQGNKDKDIILTVLR 203
                 89**************************77888888*****************987 PP

>> GRASP55_65  GRASP55/65 PDZ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       3.2   1.2e+04      74      90 ..      87     103 ..      81     107 .. 0.78
   2 !   30.7   0.0     9e-11   3.2e-07      44     127 ..     145     233 ..     134     234 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 3.2
                 SSSSSTSCSHHHHTTTS CS
  GRASP55_65  74 gllkgeedlselveahe 90 
                  l+++ +dl++++e++ 
  KHJ33240.1  87 YLVNDLKDLMNIIEKRI 103
                 56778899999998865 PP

  == domain 2  score: 30.7 bits;  conditional E-value: 9e-11
                 -EEEEEEBTTSHHHHHT--TTTEEEEEEE.SSSS...STSCSHHHHTTTSSS-EEEEEEETTTTEEE...EEEE---TTSSSSTTTSEEE CS
  GRASP55_65  44 vwhvldvlegsPaakagLvpksDYiiGldkgllk...geedlselveaheekelkLlvYnsesdevr...evtvkpsrewGgegalGcdv 127
                   +v  v e+sPaa+agL+   D i  ++   ++   g + lse v+ +++k++ L v    +   r     t+ p+++wGg+g++Gc++
  KHJ33240.1 145 FAKVNSVVENSPAASAGLQ-IGDLIKSFSYVNITnhdGLKRLSECVQGNKDKDIILTVLRPLDSLRRkelTLTLRPTQNWGGKGLIGCHI 233
                 5688899**********97.78999999985555344888999***************865444333211477889************87 PP

>> PDZ_2  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0   3.9e-10   1.4e-06      16      72 ..     146     207 ..     140     217 .. 0.81

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 3.9e-10
                 EEEEEE-TTSGGGGT.--TT-EEEEETTB--SSHHHHH..HHHHTS-TT-EEEEEEEE...T CS
       PDZ_2  16 vlvvsVkeggPaakaglkagDvilkvdgkkvksledli..slllkkkpGdtVkltvlR...d 72 
                 + v sV e++Paa agl++gD i ++  + +++ + l+  s++ ++ +++++ ltvlR    
  KHJ33240.1 146 AKVNSVVENSPAASAGLQIGDLIKSFSYVNITNHDGLKrlSECVQGNKDKDIILTVLRpldS 207
                 5799***************************7666666337777**************6542 PP

>> PDZ  PDZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   2.2e-06     0.008      27      61 ..     145     179 ..     138     202 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 2.2e-06
                 SEEEEEECTTSHHHHHTSSTTEEEEEETTEETTTS CS
         PDZ  27 gifvsevlpggaaeadglkvGDkIlsvNgvdvenv 61 
                  + v++v+++++a+ +gl++GD I s   v+++n+
  KHJ33240.1 145 FAKVNSVVENSPAASAGLQIGDLIKSFSYVNITNH 179
                 6789******8888888*******99888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1828.12
//
Query:       KHJ33241.1  [L=112]
Description: putative shwachman-bodian-diamond syndrome protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-24   85.0   1.0    3.2e-24   84.8   1.0    1.1  1  SBDS      Shwachman-Bodian-Diamond syndrome (SBDS) protein
  ------ inclusion threshold ------
       0.18   12.2   0.6        1.3    9.4   0.1    2.2  3  FERM_f0   N-terminal or F0 domain of Talin-head FERM


Domain annotation for each model (and alignments):
>> SBDS  Shwachman-Bodian-Diamond syndrome (SBDS) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.8   1.0   3.6e-28   3.2e-24       2      86 ..       6      96 ..       5      98 .. 0.95

  Alignments for each domain:
  == domain 1  score: 84.8 bits;  conditional E-value: 3.6e-28
                -EEEEEEETTEEEEEEE.-HHHHHHHHCTT---HHHHBSSSS-EEETTTT.....EE--HHHHHHHHS---HHHHHHHHHHHSEEE--HHH CS
        SBDS  2 vsivrykkgkkrFeiav.yknklleyregkeidLsevlqsekiFtnaskG.....etaskselekafgteskdeiikeILkkGeiqvsaee 86
                + +v+yk+++ +F+i++ + + +++++ +k+i+L+++++++kiF+++++G     +task++le++fgt+  +++ik+I++kG++q+s+  
  KHJ33241.1  6 QIKVHYKGKDDDFIIFIdDIKLANSWKTDKSISLAHFVSAFKIFVTHKHGaqgslDTASKATLENEFGTSVIEDVIKIIIEKGTMQESEAA 96
                579**************9999999***************************************************************9976 PP

>> FERM_f0  N-terminal or F0 domain of Talin-head FERM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.069   6.2e+02      36      65 ..       8      37 ..       4      54 .. 0.68
   2 ?   -1.8   0.0      0.45     4e+03      45      58 ..      45      58 ..      34      71 .. 0.73
   3 ?    9.4   0.1   0.00014       1.3      21      47 ..      74     100 ..      61     108 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.069
     FERM_f0 36 aeaelgnakdygLFladedpkkgvWlener 65
                + +  g+ +d+ +F+ d    ++   +++ 
  KHJ33241.1  8 KVHYKGKDDDFIIFIDDIKLANSWKTDKSI 37
                445567789999999887665554444444 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.45
     FERM_f0 45 dygLFladedpkkg 58
                 + +F++++ + +g
  KHJ33241.1 45 AFKIFVTHKHGAQG 58
                57788888777774 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00014
     FERM_f0  21 ettVydacklirekiaeaelgnakdyg 47 
                 + +++d++k+i ek +++e + a+ yg
  KHJ33241.1  74 TSVIEDVIKIIIEKGTMQESEAAERYG 100
                 45799**************99999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       506  (0.0282224); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 839.84
//
Query:       KHJ33242.1  [L=203]
Description: putative opa3-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-42  143.5   0.1    3.9e-42  143.0   0.0    1.3  1  OPA3             Optic atrophy 3 protein (OPA3)
  ------ inclusion threshold ------
        5.2    7.0  12.8       0.42   10.5   2.4    2.1  2  Ax_dynein_light  Axonemal dynein light chain


Domain annotation for each model (and alignments):
>> OPA3  Optic atrophy 3 protein (OPA3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.0   0.0   4.4e-46   3.9e-42       1     120 [.       4     167 ..       4     175 .. 0.93

  Alignments for each domain:
  == domain 1  score: 143.0 bits;  conditional E-value: 4.4e-46
        OPA3   1 lpllKLaslavRtlsKPianrikaqakehprfrkvcirlaqalhrlemrlrlrllgdekaa...................................... 61 
                 lpl+KLasl+vR++sK++ n ikaqa+ehp+fr+++ r++q++h+++mr+ + ll++ ++                                       
  KHJ33242.1   4 LPLFKLASLFVRHISKYGGNWIKAQAQEHPKFREYAQRYGQKMHQINMRMAVTLLKN-STVdkrvkektepslnnkeqkhveevpslkdtvkekfhqkd 101
                 79*******************************************************.333356689999***************************** PP

        OPA3  62 .......rkirpLseekAvelGAellgEafifsvagglilyEywrssrkeakkeeevkeeleelee 120
                        rk+rpL+e kAvel+A++lg+ f+++vag+li yEy+rs+++++ ++e++++  ++lee
  KHJ33242.1 102 vpssvwkRKFRPLPEGKAVELFANVLGDSFVLLVAGTLISYEYMRSKARPDINSEKIADLYDKLEE 167
                 *******************************************************99999555543 PP

>> Ax_dynein_light  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   2.9     0.018   1.6e+02     126     180 ..      37      95 ..      15     101 .. 0.61
   2 ?   10.5   2.4   4.6e-05      0.42     116     163 ..     154     200 ..     140     203 .] 0.82

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.018
  Ax_dynein_light 126 kkikeLeeekeelekqvaelkakleal....ekrekerrqeeekkheeeieflkksnqq 180
                      +  ++  ++  +++ ++a +  k +++    +++ +  ++++e+kh ee+  lk + ++
       KHJ33242.1  37 EYAQRYGQKMHQINMRMAVTLLKNSTVdkrvKEKTEPSLNNKEQKHVEEVPSLKDTVKE 95 
                      44444455555555555554444444400004455556789999999999999988665 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 4.6e-05
  Ax_dynein_light 116 qaeqgkselekkikeLeeekeelekqvaelkaklealekrekerrqee 163
                      ++ ++ ++l +k++eL  ++++le++++e+k kleale    e ++e+
       KHJ33242.1 154 NS-EKIADLYDKLEELSGRERDLENENNEVKIKLEALETTLIEVKNEK 200
                      44.4578899999*************************9988877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1697  (0.0946511); expected 358.6 (0.02)
Passed bias filter:                      645  (0.0359752); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 1709.57
//
Query:       KHJ33243.1  [L=680]
Description: putative ph response protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.1e-19   68.0   0.0    6.1e-18   65.3   0.0    2.4  3  Arrestin_N  Arrestin (or S-antigen), N-terminal domain
    7.9e-08   32.8   0.5    0.00032   21.2   0.2    3.3  3  Arrestin_C  Arrestin (or S-antigen), C-terminal domain


Domain annotation for each model (and alignments):
>> Arrestin_N  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.3   0.0   6.8e-22   6.1e-18       3     145 ..      43     194 ..      41     195 .. 0.86
   2 ?   -2.7   0.0      0.62   5.5e+03      42      74 ..     362     399 ..     342     404 .. 0.55
   3 ?   -1.8   0.0      0.33   2.9e+03      98     125 ..     441     471 ..     439     482 .. 0.76

  Alignments for each domain:
  == domain 1  score: 65.3 bits;  conditional E-value: 6.8e-22
                 EEES-SEEEEETT--EEEEEEE-CCCCTT.CEEEEEEEEEEEESSSSTTTT....CCCEEEEEEEEEEEEESTSSSSS.SSSSH..HHHHHHH-TTEEE CS
  Arrestin_N   3 ieldkrdevyhpgetvdGkvlleteelkkarkvkielsgkartgweeseva....gktfrkdltlkkkqeyleteksllkskkd..sqekLpkGehafp 95 
                 i+ d++++ y+pg++v+G+v+l+  ++ +++ ++++l+g++r+ ++ +  +    +     +++ +++q++ +  +sl++++ +  ++ +L +G ++f 
  KHJ33243.1  43 IRPDEPHRKYSPGDAVKGTVVLTVFKPTRITHLTVCLHGYVRVFKSPNGANepfvDPGLAATQNPQNSQYFGNGHASLFQDEITlcGEGRLDAGIYEFK 141
                 6679***************************************99988877899866666667777778999999999999765225677********* PP

                 EEE---TT.S--SECSGEEEEEEEEEEEEECCC..E--C.CCEEEEEEEEEEB CS
  Arrestin_N  96 FsfelPkn.lpsSfeGkaggvrYevkvtldrpw..kidkkkkkvftVirkldl 145
                 F + +P++ lp+S+ +++g++ Y +++t++rp+  +  +++++ ++ ++k+d+
  KHJ33243.1 142 FELLFPPKdLPTSIDFERGTISYLITATITRPTliNATNSCDRKISLVEKVDV 194
                 *****99879***********************66555568999999999986 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.62
                 EEEESSSSTTTT.......CCCEEEEEEEEEEEEESTSSS CS
  Arrestin_N  42 kartgweeseva.......gktfrkdltlkkkqeyletek 74 
                  +r g+ +s  a       +k  ++   lk +++y+++++
  KHJ33243.1 362 LYRQGRIDS--ApfqhpspQKNAKEAARLKHEEYYPKSKT 399
                 333333333..23355665777777788888777877776 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.33
                 E---TTS--SECSGEEEE...EEEEEEEEEC CS
  Arrestin_N  98 felPknlpsSfeGkaggv...rYevkvtldr 125
                 +++P+++ +++ G  g++   +Y ++v ld 
  KHJ33243.1 441 IKVPEHVFPTIHGVPGQIvtfKYNIEVCLDL 471
                 7899999999999999875557888888775 PP

>> Arrestin_C  Arrestin (or S-antigen), C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0   0.00056       5.1      13     129 ..      49     194 ..      47     199 .. 0.76
   2 !   21.2   0.2   3.6e-08   0.00032       2     116 ..     320     473 ..     319     484 .. 0.79
   3 ?   -0.9   0.0      0.23     2e+03      55      88 ..     522     558 ..     497     582 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00056
                 -SEEETT--EEEEEEEEE-SSSEEEEEEEEEEEEEEEESS....................SEEEEEEEEEEEEE---.....B-TTEE.EEEEEEE.-- CS
  Arrestin_C  13 kkgyvpGetipvtvkidndskkkvkkikvslvqhvdvcafnr..................snkkeknvvaksdsvkv.....tsaakdkletevelqiP 88 
                  + y pG++++ tv ++  +  ++ +++v+l  +v+v+ + +                  +++ + n  a+ +++++      +   + +e+++el +P
  KHJ33243.1  49 HRKYSPGDAVKGTVVLTVFKPTRITHLTVCLHGYVRVFKSPNganepfvdpglaatqnpqNSQYFGNGHASLFQDEItlcgeGRLDAGIYEFKFELLFP 147
                 5779*************9999******************988999999999998888887677777777777777777788755666667777888887 PP

                 .--B-----S---EEEEEEEEEEEEEEE.......SSEEEEEEEEEEEE CS
  Arrestin_C  89 .eeltpssarnvelikvsYklkvkltls.......gsggelslelPivl 129
                  ++l+ s   + e  ++sY +  ++t         ++ +++sl   + +
  KHJ33243.1 148 pKDLPTSI--DFERGTISYLITATITRPtlinatnSCDRKISLVEKVDV 194
                 45555555..788888888888887766666665435556666555555 PP

  == domain 2  score: 21.2 bits;  conditional E-value: 3.6e-08
                 ---EEEEEEES-SEEETT--EEEEEEEEE-SS.SEEEEEEEEEEEEEEEESS.........SEEEEEEEEEEEEE---..................... CS
  Arrestin_C   2 dgkvsleaslpkkgyvpGetipvtvkidndsk.kkvkkikvslvqhvdvcafnr.......snkkeknvvaksdsvkv..................... 71 
                 d++++ ++ l+k+g  pG+ ip+++++++++  ++++ + ++l ++ ++ +          ++k+  +   ++    +                     
  KHJ33243.1 320 DQTITAKIELQKSGCLPGDIIPLKIHLKHKKViRSMHGVIITLYRQGRIDSAPFqhpspqkNAKEAARLKHEE----Yypksktglsglsltsagscsi 414
                 567899**********************7666599**********9999888557786665333333333333....2344488888888888888888 PP

                 ...............B-TTEE.EEEEEEE.----B-----.S---EEEEEEEEEEEEEEES CS
  Arrestin_C  72 ...............tsaakdkletevelqiPeeltpssa.rnvelikvsYklkvkltlsg 116
                                ++ +++ ++  +++++Pe + p+     +++++ +Y ++v+l+l+g
  KHJ33243.1 415 frkdlaqtfapividPKTFTAIIN--TSIKVPEHVFPTIHgVPGQIVTFKYNIEVCLDLGG 473
                 999999999999987777777777..9**********77657899**************96 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.23
                 SEEEEEEEEEEEEE---.B-TTEE.EEEEEEE...-- CS
  Arrestin_C  55 snkkeknvvaksdsvkv.tsaakdkletevel..qiP 88 
                 s ++eknvv++ +  +v ++++++ ++ +ve   qiP
  KHJ33243.1 522 SIRREKNVVTSVFEITVgSEDSTRYWKSKVENsaQIP 558
                 6778999999988888874444444443333233555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (680 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4775.79
//
Query:       KHJ33244.1  [L=377]
Description: putative mrna splicing factor rna helicase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-17   64.1   1.6    1.7e-17   64.1   1.6    3.7  4  Hep_59    Hepatocellular carcinoma-associated antigen 59
  ------ inclusion threshold ------
      0.032   14.3   1.0       0.23   11.5   1.0    2.4  1  DUF1013   Protein of unknown function (DUF1013)


Domain annotation for each model (and alignments):
>> Hep_59  Hepatocellular carcinoma-associated antigen 59
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.4      0.13   1.1e+03      33      54 ..      30      51 ..      13      70 .. 0.50
   2 ?    0.8   0.5      0.09   8.1e+02      19      64 ..      78     126 ..      75     131 .. 0.59
   3 !   64.1   1.6   1.9e-21   1.7e-17       2     106 .]     127     235 ..     126     235 .. 0.64
   4 ?   -2.0   1.7      0.69   6.2e+03       5       5 ..     305     305 ..     238     356 .. 0.56

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.13
      Hep_59 33 eqeeeeekeseassksedaede 54
                + e+++e+++++ss++ d++++
  KHJ33244.1 30 KGENDTEEDTKDSSTEIDSDKN 51
                2222333333333333333333 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.09
      Hep_59  19 IeeeLakrkgk...skqeqeeeeekeseassksedaedelyevpehlkv 64 
                 I+++L++r+      k++ ++ + ke+  +++++++++ l +++++l++
  KHJ33244.1  78 IRQRLKHRRIGgmgIKNQAQNTTIKEEIVEEAEKESSEGLHSIKNKLRI 126
                 7788888776666633444444444444444445455558888888876 PP

  == domain 3  score: 64.1 bits;  conditional E-value: 1.9e-21
      Hep_59   2 Ftkqtgkrd.vdkhMekYIeeeLakrkgk........skqeqeeeeekeseassksedaede..lyevpehlkv..sskkeeeea.....lsnqmlggI 82 
                 Ft qtg +   d+hM++Y++++Lakr+++        +            + s+++++a ++    +++++ ++  s+ +++  +      +  +lg +
  KHJ33244.1 127 FTRQTGVIGdADRHMMAYVDSQLAKRSSQglqhssltQ------------KISEHQSSAVNNvpSSKISSSTNQksSEISKN--KinvapRQPVTLGML 211
                 9*****9988***************9877443333321............22222222222211123333333311111222..1334556777***** PP

      Hep_59  83 pEVdLgieaklkNieetekakrkl 106
                 +E+dLg+ea+ +N+++te+a+r+l
  KHJ33244.1 212 QEIDLGDEARERNVKMTEQATRRL 235
                 **********************97 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 0.69
      Hep_59   5 q 5  
                 q
  KHJ33244.1 305 Q 305
                 2 PP

>> DUF1013  Protein of unknown function (DUF1013)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.0   2.6e-05      0.23     108     133 ..     194     219 ..      87     225 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.6e-05
     DUF1013 108 hwnsanikpkdPvtlgLcsqkdLdaa 133
                  +n  n+ p++Pvtlg+ +++dL  +
  KHJ33244.1 194 SKNKINVAPRQPVTLGMLQEIDLGDE 219
                 46899*****************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1357  (0.0756874); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 2728.54
//
Query:       KHJ33245.1  [L=423]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.045   14.0   0.0       0.91    9.8   0.1    2.2  2  DUF4263   Domain of unknown function (DUF4263)


Domain annotation for each model (and alignments):
>> DUF4263  Domain of unknown function (DUF4263)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   5.1e-05      0.91      66     142 ..      59     136 ..      48     138 .. 0.72
   2 ?    1.7   0.0     0.015   2.7e+02       2      65 ..     171     225 ..     170     272 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 5.1e-05
     DUF4263  66 gniapseelsgai.sQikkylllldknkek..geeladlrntseleeglgikainpkgiliiGrreeleekekresfelf 142
                  +++ ++ +++a+ +Q++k+++ + ++ ++   ++++   +++  + ++++k in k++l+ G +  +    k ++++l+
  KHJ33245.1  59 STLTTKASINHAVkNQVNKTFANIAQKGHQrsPNKIN--ISQNHSTVKISAKIINKKSVLLGGDMRLFLRISKDHDWRLL 136
                 467777888888856******9999887774445555..4555555689***************9555555668888875 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.015
     DUF4263   2 ssEkkwqkffeknpwllypiisefpikevdfksDfllidslngnivlvEikkpdknlltkekkk 65 
                 ++E++ qk++++n  l    +++++++    +sD+++ +     +vlv + +p+  ++ +e++ 
  KHJ33245.1 171 KDEETRQKLLNNNEGLA---LQNAKLEP---ASDLIIYRI---ATVLVALRTPNGTVIVEETNL 225
                 68999999999999999...44444433...359999987...999999999999999866655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1024  (0.0571142); expected 358.6 (0.02)
Passed bias filter:                      668  (0.0372581); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3002.94
//
Query:       KHJ33246.1  [L=223]
Description: hypothetical protein EV44_g3266 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       320  (0.0178482); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1652.87
//
Query:       KHJ33247.1  [L=953]
Description: putative dbl homology (dh-domain) [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.2e-26   91.7   0.5    2.1e-25   90.0   0.1    2.1  2  RhoGEF    RhoGEF domain


Domain annotation for each model (and alignments):
>> RhoGEF  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.0   0.1   1.2e-29   2.1e-25       1     182 []     247     485 ..     247     485 .. 0.85
   2 ?   -1.7   0.0      0.16     3e+03      77     138 ..     763     843 ..     707     845 .. 0.62

  Alignments for each domain:
  == domain 1  score: 90.0 bits;  conditional E-value: 1.2e-29
                 HHHHHHHHHHHHHHHHHHHHHHTHCCCHHCTCCHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHH................................... CS
      RhoGEF   1 vikElleTErsYvrdLkvlvevylkplselevlseeeikiiFsnieeilelhrsflleeLeerl................................... 64 
                 +++E+++TE+sYv d k l++vy+  l ++  +s++ + +i  n++eilelh +++l +L++++                                   
  KHJ33247.1 247 ILEEIISTEESYVADVKFLMNVYVTLLASMPCISSNLRASITRNLNEILELH-EEILGDLHQVIpfseytesncvklpsrklgghqrwrsldavpenst 344
                 689*********************99998889********************.99999999*99************************99999999888 PP

                 ..........HHHTTSS-S-SHHHHHHHHSTHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGG............TT--HHHHTTHHHHH CS
      RhoGEF  65 ......k...eseeqkeaqsigdvflkfadkfkkYseYcsnypnalkllkelskknkkfkafleeaeerpec............skldLeslLikPvqR 142
                       +    + e   a ++++vf k ++ +  Y+eY ++y+ ++k + +  +++++ k+f + +e+ +              + +++ +lL+kP+qR
  KHJ33247.1 345 gvswlqEipgMTIEPRVAAKVANVFGKKINRLFIYEEYGAKYEMMIKDIGTTHRTIPQWKTFQKGLEALASSlasiscqqdntkKAMTIGDLLVKPIQR 443
                 87777615554556677999*********99999*****************555555555555555555444555555555555*************** PP

                 HHHHHHHHHHHHHTS-TT.SHHH.HHHHHHHHHHHHHHHHHH CS
      RhoGEF 143 lprYpLLLkellkntpes.hpdy.ealkkaleaikevaseiN 182
                 +++Y+LL++ellk+tp    pd    ++ ++  ++e +s iN
  KHJ33247.1 444 ICKYQLLISELLKQTPVCdCPDShLSIETVMMRLREATSAIN 485
                 ***************987345664688888888888888877 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.16
                 HHHHHHHHSTHHH...HHHHHHCHHHHHHHHHH.......................HHHHHHHHHHHHHHHHTSGGGTT--HHHHTTH CS
      RhoGEF  77 gdvflkfadkfkk...YseYcsnypnalkllke.......................lskknkkfkafleeaeerpecskldLeslLik 138
                 +++++k++         s+++++  +a+ + ke                       +s++++ f ++ +e  +++  ++ +Lesl ++
  KHJ33247.1 763 SSMMRKLS----VasiASNFTKQSGSAIFTHKElnnsnspathndgivnnnkssleSSSRQQSF-QIPDE--KENVSHRNSLESLAVM 843
                 33333333....2233777777777777777776666666666666666666655333344444.33333..4555577788877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (953 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       662  (0.0369234); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.23s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 6329.93
//
Query:       KHJ33248.1  [L=175]
Description: hypothetical protein EV44_g3071 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-17   61.1   0.6    9.4e-17   60.5   0.6    1.3  1  zf-CSL    CSL zinc finger
    4.8e-12   45.8   0.2    8.1e-12   45.1   0.2    1.4  1  DnaJ      DnaJ domain


Domain annotation for each model (and alignments):
>> zf-CSL  CSL zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.5   0.6     1e-20   9.4e-17       2      59 .]     111     170 ..     110     170 .. 0.97

  Alignments for each domain:
  == domain 1  score: 60.5 bits;  conditional E-value: 1e-20
                 EEEGGGSEEETTTTEEEEEETTSSE..EEEEHHHHHTT....--EEEETTSSEEEEEE-- CS
      zf-CSL   2 eveledfefdeeeesyyypCRCgde..FelteedleegaegaevvvqCssCSLwikVkfa 59 
                 +++le++e de+++ +y++CRCg+   + + e+dle  +++ e+ v+C++CSL++kV fa
  KHJ33248.1 111 TIDLEELESDEHNKLWYKSCRCGNGqgYLILEKDLEAAVHDQEIYVECRGCSLMLKVLFA 170
                 799*********************99*******************************985 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.1   0.2     9e-16   8.1e-12       1      63 []      14      86 ..      14      86 .. 0.86

  Alignments for each domain:
  == domain 1  score: 45.1 bits;  conditional E-value: 9e-16
                HHHHHHTSSTT......G-HHHHHHHHHHHHHHHSTTTSCCHH..HHHHHHH..HHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskd......asedeIkkaYrklalkyHPDknpkdp..eaeekFk..eineAyevLsdpekRkqYD 63
                +yYeiLg+s++       s++++++aYr   l++HPDk +++   ++++ F   +i++A+++L dp ++++YD
  KHJ33248.1 14 TYYEILGLSEEfqkspsISSKKLRAAYRHTLLQHHPDKTSSSItrRNRQTFTvdQISQAFSTLLDPLSKAKYD 86
                69********966666556999***************99665556777778666******************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1222.31
//
Query:       KHJ33249.1  [L=290]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       629  (0.0350828); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2134.23
//
Query:       KHJ33250.1  [L=273]
Description: putative signal recognition particle protein sec65 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-31  107.9   0.0    6.5e-31  107.1   0.0    1.4  1  SRP19     SRP19 protein


Domain annotation for each model (and alignments):
>> SRP19  SRP19 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.1   0.0   3.6e-35   6.5e-31       1      93 [.      70     159 ..      70     160 .. 0.96

  Alignments for each domain:
  == domain 1  score: 107.1 bits;  conditional E-value: 3.6e-35
                 EEECCCCBTTS-CCCT--S-CCCSBSS--HHHHHHHHHHCTSCEEEEEEECTTSSTTCCEEEEEC-..........SS-CHHHHHHHHHHHHH CS
       SRP19   1 viYPvYldskktrkeGRrvpkelavenPtaqeiaealkalglevvvepeksyPrdwanpGrVrvklkedgkevnekiknkkellkkiaellke 93 
                 +iYP+Y+d+ ++r++GR v kelavenP a+ei++a+ + gle+v+ep+k +P+dwanpGrVrv+l+      n ++knk++l++ i+e+lk+
  KHJ33250.1  70 CIYPIYFDKLRSRRQGRMVGKELAVENPMAREIVNACGRQGLETVFEPTKFHPKDWANPGRVRVNLR---GGRNLSVKNKHHLYILISEHLKA 159
                 8*****************************************************************6...566889***************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      260  (0.0145016); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 2004.66
//
Query:       KHJ33251.1  [L=87]
Description: hypothetical protein EV44_g3460 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.034   14.4   0.1       0.25   11.6   0.1    2.2  1  DND1_DSRM  double strand RNA binding domain from DEAD END PRO
      0.066   13.9   0.0       0.17   12.6   0.0    1.6  1  dsrm       Double-stranded RNA binding motif


Domain annotation for each model (and alignments):
>> DND1_DSRM  double strand RNA binding domain from DEAD END PROTEIN 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   2.8e-05      0.25       6      71 ..      16      77 ..      12      82 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.8e-05
   DND1_DSRM  6 lLeelCeknkwgsPvYelhs.eagpdgkllflYkVvipgietslkgvvvifmpdklastkeeAkela 71
                 Lee C++   ++Pv+++ s  +g   +   +++V  ++i+  +      + ++ l++  e+A e+a
  KHJ33251.1 16 ELEERCREAHISPPVFHIMSdRRGGRTAWSSTVTVQGQTIAARF-----WYDGQYLSNAIEDAAEHA 77
                599*****************999988777767777666666662.....244455555555555444 PP

>> dsrm  Double-stranded RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.9e-05      0.17       2      67 .]      14      81 ..      13      81 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.9e-05
                HHHHHHHHHHTTSEEEEEEEEEESSTSSSEEEEEEEEETTEEEEEEEE...SSHHHHHHHHHHHHHHHH CS
        dsrm  2 KskLqeycqkkgkppnyeyvseegpphslpkFvvtvkvngklygsGvg...snKKeAeqsAAedalekL 67
                +++L+e c+  +  p+   + ++   +  + ++ tv+v g+++++ +    +    A  +AAe+al +L
  KHJ33251.1 14 RRELEERCREAHISPPVFHIMSDRRGGR-TAWSSTVTVQGQTIAARFWydgQYLSNAIEDAAEHALDYL 81
                6889999999996666666666666666.79*********99997766666567799999***999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 650.20
//
Query:       KHJ33252.1  [L=625]
Description: putative tyrosine-protein phosphatase non-receptor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      6e-60  202.7   0.1    1.6e-57  194.8   0.1    3.0  1  Y_phosphatase    Protein-tyrosine phosphatase
    1.2e-11   45.0   0.0    6.1e-11   42.8   0.0    2.1  3  Rhodanese        Rhodanese-like domain
  ------ inclusion threshold ------
      0.028   14.4   0.1       0.07   13.1   0.1    1.6  1  Y_phosphatase3   Tyrosine phosphatase family
       0.06   13.2   0.0       0.17   11.7   0.0    1.8  1  DSPc             Dual specificity phosphatase, catalytic doma
       0.14   12.3   0.1       0.66   10.1   0.0    2.2  2  PTPlike_phytase  Inositol hexakisphosphate


Domain annotation for each model (and alignments):
>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.8   0.1   4.3e-61   1.6e-57       3     235 .]     267     587 ..     265     587 .. 0.84

  Alignments for each domain:
  == domain 1  score: 194.8 bits;  conditional E-value: 4.3e-61
                    GGSSSTTS-B-CTTEEEB.TTTTTTTTEEEEEEEEECTEEEEEEEEE---GGGHHHHHHHHHHTT--EEEEESBSEETTEESS---S-SSTSSEEE CS
  Y_phosphatase   3 eknRykdilpydksrVkl.kssegpsdYInAnyikgykkekkyIatQgPlkstvedFWrmvwqekvkvivmLtsleekgrekcaqYwpeeeeesle 97 
                    +knRy++i py++srVkl +  eg++dY+nA++ik ++++k+yIa QgPl+ t+edFW+++w++ v+vivmLt ++e g+ kc++Yw+ ++     
     KHJ33252.1 267 SKNRYNNIWPYEHSRVKLlSRPEGACDYVNASHIKASRSNKRYIASQGPLPATFEDFWSVIWEQGVQVIVMLTAEKEGGQLKCHNYWSAQN----- 357
                    79****************877888999**********9**************************************************444..... PP

                    ETTEEEEEE............EEEEEESSEEEEEEEEEETTTTE.........................EEEEEEEEEESSS-SSSSGSCCHHHH. CS
  Y_phosphatase  98 ygkikvtlk...........ekekedekeyvlrelevkkkkees.........................eerevkqlqytnWpdhgvpesaksll. 156
                    yg++ +++             +e   + + ++ ++e ++ +++s                           +e++q++y +Wpd g+p ++ +ll 
     KHJ33252.1 358 YGHFLLETLsenrvplearpRNEV-SRRRATIIDIEASRVATRSgqpvsegphvtirkfalshkglpssPVHEITQIHYCSWPDFGAPVNPCDLLg 452
                    333333333222223223343333.333444444444444444477899999999999999999999997789***************99999885 PP

                    .....HHHHHHHHHH.............STTSS-EEEECSSSSHHHHHHHHHHHHHHHHHHHSE.EEHHH.......................... CS
  Y_phosphatase 157 .....klirkveksk.............eaksgpvvVhCsaGvgRtgtfvaldillqqleaeee.vdvlq.......................... 207
                         +li++                   +++ p++VhCsaG+gRtgtf+++d ++++l+++++ +++++                          
     KHJ33252.1 453 lvelsNLIQRT---AaaptqnpridepeGEDTPPMLVHCSAGCGRTGTFCTIDSVIDILKRQRKeMSIKSvmkfphssflnghhsgkikntlpmid 545
                    55444444444...266699******9988999****************************77778888888899********************* PP

                    ..............HHHHHHTTSTTSS-SHHHHHHHHHHHHH CS
  Y_phosphatase 208 ..............ivkelrkqRpgmvqtleqyiflyevile 235
                                  +v+  r+qR +mvq+l q++ +ye++le
     KHJ33252.1 546 dgwiwdgdmdlvekTVEDFRSQRLSMVQNLRQFVLCYETVLE 587
                    **************************************9986 PP

>> Rhodanese  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.8   0.0   1.7e-14   6.1e-11       5     106 ..      10     124 ..       7     125 .. 0.87
   2 ?   -3.9   0.0         5   1.8e+04      16      30 ..     129     143 ..     127     146 .. 0.74
   3 ?   -2.0   0.0       1.4   5.1e+03      25      58 ..     294     323 ..     286     359 .. 0.68

  Alignments for each domain:
  == domain 1  score: 42.8 bits;  conditional E-value: 1.7e-14
   Rhodanese   5 lkellekgkvallDvRppeeYekghIpgAvnv..skdtlsrakkseapllelpeellel....gidnkktvvvycdgggr.aaaa..aallkk...lGy 91 
                 + e + + +  llD R +++Y++++I+gA+n+  + + l+r++++ ++l ++++  +e+    ++ + k ++ y++ +++ + +    ++lkk    G+
  KHJ33252.1  10 VIEQFPDSSLLLLDLRVFPQYSQSRIKGALNLciPTTLLKRPSFNLQKLSDTFTNKEEKekflQWPKAKYIIMYDAASNQkKDSGpaLHTLKKfiiEGW 108
                 55666566667***********************99999999999999999999999999999*****************6666676668887889999 PP

   Rhodanese  92 kn.vsvldGGfkawke 106
                 k   ++l  Gfk++++
  KHJ33252.1 109 KGtSYILQDGFKEFAK 124
                 888**********986 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 5
   Rhodanese  16 llDvRppeeYekghI 30 
                 l+D Rp+ e + + I
  KHJ33252.1 129 LVDSRPFKEIQSSKI 143
                 8999*9999555555 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 1.4
   Rhodanese  25 Yek.ghIpgAvnvskdtlsrakkseapllelpeel 58 
                 Y   +hI+ +++      +r   s++pl +++e++
  KHJ33252.1 294 YVNaSHIKASRSN-----KRYIASQGPLPATFEDF 323
                 5444788887776.....55555555555555555 PP

>> Y_phosphatase3  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1     2e-05      0.07     121     139 ..     480     500 ..     471     508 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2e-05
  Y_phosphatase3 121 e..pvlfHCtaGKDRTGvlaa 139
                     +  p+l+HC+aG  RTG ++ 
      KHJ33252.1 480 DtpPMLVHCSAGCGRTGTFCT 500
                     2469*************9886 PP

>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   4.8e-05      0.17      75      92 ..     483     500 ..     475     522 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.8e-05
                 EEEEEESSSSSHHHHHHH CS
        DSPc  75 kvlVHCqaGisRSatlii 92 
                   lVHC aG  R++t+++
  KHJ33252.1 483 PMLVHCSAGCGRTGTFCT 500
                 579************985 PP

>> PTPlike_phytase  Inositol hexakisphosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.4   4.9e+03      28      50 ..     224     246 ..     214     276 .. 0.72
   2 ?   10.1   0.0   0.00018      0.66     121     151 ..     459     501 ..     453     506 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.4
                      T--.HHHHHHHHHHHHHHHHT-S CS
  PTPlike_phytase  28 lkeytgisaeeleklearlkeev 50 
                       ++y +i++eel  + ++l + v
       KHJ33252.1 224 SHKYLRIEQEELATMTKALSSKV 246
                      35677888888888877776665 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00018
                      HHHHHHTS-T............T-EEEEE-SSSSHHHHHHHHH CS
  PTPlike_phytase 121 lvsilkeape............ktalvfnCqmGrgRTTtamvi 151
                      l++  + ap+            +++++++C++G gRT t+ +i
       KHJ33252.1 459 LIQRTAAAPTqnpridepegedTPPMLVHCSAGCGRTGTFCTI 501
                      5555555544566677777777999************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (625 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 4308.54
//
Query:       KHJ33253.1  [L=534]
Description: hypothetical protein EV44_g6054 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    0.00018   21.4   2.5    0.00028   20.8   2.5    1.3  1  zf-CCHC       Zinc knuckle
    0.00059   19.6   4.1    0.00088   19.0   4.1    1.3  1  zf-CCHC_2     Zinc knuckle
  ------ inclusion threshold ------
      0.015   15.2   0.5      0.033   14.1   0.5    1.5  1  zf-CCHC_3     Zinc knuckle
      0.028   14.1   1.6      0.059   13.1   1.6    1.5  1  zf-CCHC_5     GAG-polyprotein viral zinc-finger
       0.29   11.2   5.0       0.81    9.7   0.8    2.6  2  Xpo1          Exportin 1-like protein
       0.44   10.6   2.5       0.61   10.1   1.0    2.0  2  Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   2.5   9.5e-08   0.00028       2      17 ..     407     422 ..     406     423 .. 0.93

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 9.5e-08
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                  C+ C + GH+a++Cp
  KHJ33253.1 407 HCFLCKQKGHWANNCP 422
                 7**************9 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   4.1   2.9e-07   0.00088       6      21 .]     408     423 ..     407     423 .. 0.98

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 2.9e-07
   zf-CCHC_2   6 ChiCgkkGHyIqdCPt 21 
                 C +C++kGH+ ++CPt
  KHJ33253.1 408 CFLCKQKGHWANNCPT 423
                 ***************8 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.5   1.1e-05     0.033       7      37 ..     408     439 ..     404     441 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.1e-05
   zf-CCHC_3   7 CQkClkkGHwtYECkn.agerkytkRpsrtqq 37 
                 C  C +kGHw+  C+  a+++   +Rps  q+
  KHJ33253.1 408 CFLCKQKGHWANNCPTaAQKKSQFTRPSDGQP 439
                 556************966666666***97776 PP

>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   1.6     2e-05     0.059       2      21 ..     405     424 ..     404     431 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2e-05
                 --B-TTT-SSBS-TTT---S CS
   zf-CCHC_5   2 pglCpRCkkgkHwardChsk 21 
                 ++ C  Ck+  Hwa++C   
  KHJ33253.1 405 ENHCFLCKQKGHWANNCPTA 424
                 789**************765 PP

>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.8   0.00027      0.81      54     102 ..      48      96 ..      41     108 .. 0.79
   2 ?    2.7   0.2      0.04   1.2e+02      21      97 ..     259     350 ..     243     391 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00027
                 HHHHTSHTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH CS
        Xpo1  54 eEiadfsrskleqerrndlkdllrsnvqkilelllqileqsqskkqsse 102
                 e+  ++  s  +++ +n+++  +rs+++ + e+l + l+ ++s+k+++ 
  KHJ33253.1  48 EDKLKIMASVIKNQVENKIESKMRSEFESMTEILKKTLNDMNSTKNNPA 96 
                 5555566666778889**************************9984443 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.04
                 TTTSTTHHHHHHHHHCT...............HHHHHHHHHHHHHHHHHHHTSHTTTSCHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
        Xpo1  21 pnnWpsffddllsllsss..............psglelllriLkvlpeEiadfsrskleqer.rndlkdllrsnvqkilelllqileqsqsk 97 
                   +W ++++ +++ l+++              p+  e  l++L+++    ++  +  +++   +++++d ++++++ +l  + + l++ +++
  KHJ33253.1 259 NPTWLDLVEAIIQVLKKHqtlysqmtqfarmaPKYEEDKLQFLRRIRNAYYQLPSIHQSSLAvKEAFRDHMQQHLPLVLLHMGNKLSTKSTA 350
                 56777888888888888777777777777777777777788888888888886665555555577777777777777776666666655543 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.0   0.00021      0.61      34     101 ..      20      88 ..      15      96 .. 0.87
   2 ?   -3.3   0.0       2.9   8.8e+03      76      85 ..     219     228 ..     212     234 .. 0.51

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00021
  Baculo_PEP_C  34 aqlatlldaietqLnalsedlksllaeldtrldtlltnLtdal.nalqdtlrneLtnlnsiltnLlssv 101
                   + l+t +d +e++++++ ed++++   ++++l+ +++ +++++ n+++ ++r+e ++++ il   l+++
    KHJ33253.1  20 GSLNTRIDILEQKFEEVIEDIEKSNRLVEDKLKIMASVIKNQVeNKIESKMRSEFESMTEILKKTLNDM 88 
                   578999*********************************988758899*********999998766655 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.9
  Baculo_PEP_C  76 lnalqdtlrn 85 
                   l+++q++l++
    KHJ33253.1 219 LAQIQEQLKT 228
                   3333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1984  (0.110659); expected 358.6 (0.02)
Passed bias filter:                      668  (0.0372581); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 3673.65
//
Query:       KHJ33254.1  [L=164]
Description: hypothetical protein EV44_g3199 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.031   14.4   0.1      0.059   13.5   0.1    1.4  1  TetR_C_34   Tetracyclin repressor-like, C-terminal domain
      0.046   13.8   1.0       0.25   11.4   0.8    1.9  2  TPR_MLP1_2  TPR/MLP1/MLP2-like protein
      0.087   11.4   1.2      0.099   11.2   1.2    1.0  1  FapA        Flagellar Assembly Protein A
      0.099   12.5   0.8        0.5   10.3   0.1    2.2  3  DELLA       Transcriptional regulator DELLA protein N termina


Domain annotation for each model (and alignments):
>> TetR_C_34  Tetracyclin repressor-like, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   1.3e-05     0.059      24      56 ..      15      47 ..      11      50 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.3e-05
   TetR_C_34 24 asvLEhnvsvealvafKrallerlerlaaller 56
                +s LE+nv  e lv+ K +++++l+rl++  er
  KHJ33254.1 15 SSDLERNVVFELLVELKDRYMRDLNRLKENTER 47
                799************************998776 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0     0.098   4.4e+02      38      61 ..      27      50 ..      12      53 .. 0.72
   2 ?   11.4   0.8   5.5e-05      0.25      27      71 ..      61     105 ..      36     113 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.098
  TPR_MLP1_2 38 akeaqqkYerelvkhaedvkelqa 61
                + e +++Y r l+  +e+++ l++
  KHJ33254.1 27 LVELKDRYMRDLNRLKENTERLNK 50
                556666777777777777776665 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 5.5e-05
  TPR_MLP1_2  27 lqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelka 71 
                  + ++ ++ +++k+a+  Ye+ + k  + ++++++lr+e  ++k+
  KHJ33254.1  61 PEAKCSQHFDLLKTAELGYENKISKLMDVTQQISKLRTEGLSAKK 105
                 456789999*****************************9755554 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.2   2.2e-05     0.099     337     430 ..      29     120 ..       7     134 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.2e-05
        FapA 337 eklkeleeeleeleeeleklkkk.ikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeeleskkeeakikvnk.eiypgvkik 430
                 e  ++  ++l++l+e++e+l+k  i+ ++k    ++ e+++++ ++ l+++   +++++++l++  +++++   ++ +++k k++   +++ v+++
  KHJ33254.1  29 ELKDRYMRDLNRLKENTERLNKVwIAAVEK----NMPEAKCSQHFDLLKTAELGYENKISKLMDVTQQISKLRTEGLSAKKAKIQTtVLFSMVELS 120
                 333677788888888888888887666666....55678899999999999999999999999999999998888866667777763456666665 PP

>> DELLA  Transcriptional regulator DELLA protein N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.8   8.1e+03      50      63 ..      15      29 ..      11      33 .. 0.50
   2 ?    0.0   0.0      0.18   8.2e+02      15      38 ..      37      60 ..      35      66 .. 0.77
   3 ?   10.3   0.1   0.00011       0.5       5      29 ..      75      99 ..      70     118 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.8
       DELLA 50 PSdl.sswvesmLse 63
                 Sdl  + v  +L e
  KHJ33254.1 15 SSDLeRNVVFELLVE 29
                455533344455555 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.18
       DELLA 15 dladVAqkLEqLemvlgaaqedgl 38
                dl+   ++ E+L++v +aa e+++
  KHJ33254.1 37 DLNRLKENTERLNKVWIAAVEKNM 60
                6677778999**999988877665 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.00011
       DELLA  5 avlGYkvrssdladVAqkLEqLemv 29
                a+lGY  + s l+dV q++ +L + 
  KHJ33254.1 75 AELGYENKISKLMDVTQQISKLRTE 99
                89******************99765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       945  (0.0527079); expected 358.6 (0.02)
Passed bias filter:                      551  (0.0307323); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1271.35
//
Query:       KHJ33255.1  [L=680]
Description: putative ste like transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.2e-56  187.8   0.1    9.1e-56  187.0   0.1    1.4  1  STE            STE like transcription factor
    4.2e-11   42.7  12.7    2.3e-06   27.7   2.0    2.8  2  zf-C2H2        Zinc finger, C2H2 type
    3.4e-08   33.5   4.9    3.4e-08   33.5   4.9    3.0  3  zf-H2C2_2      Zinc-finger double domain
    1.2e-07   32.0  10.2    0.00041   20.9   1.1    2.7  2  zf-C2H2_4      C2H2-type zinc finger
    0.00056   20.1   0.8      0.013   15.8   0.3    2.5  2  zf-C2H2_jaz    Zinc-finger double-stranded RNA-binding
     0.0012   18.8   5.6     0.0015   18.4   0.3    2.6  2  zf-C2H2_6      C2H2-type zinc finger
  ------ inclusion threshold ------
      0.018   15.3   0.3      0.045   14.0   0.3    1.6  1  zinc_ribbon_9  zinc-ribbon
       0.24   11.7   4.1       0.47   10.8   4.1    1.5  1  zf-Di19        Drought induced 19 protein (Di19), zinc-bindin
       0.75   10.3   2.6        1.7    9.1   0.9    2.3  2  zf-met         Zinc-finger of C2H2 type
        5.2    7.1   6.0        5.1    7.1   0.5    2.4  2  zf-C2HC_2      zinc-finger of a C2HC-type


Domain annotation for each model (and alignments):
>> STE  STE like transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.0   0.1   5.1e-59   9.1e-56       1     110 []      49     157 ..      49     157 .. 0.99

  Alignments for each domain:
  == domain 1  score: 187.0 bits;  conditional E-value: 5.1e-59
         STE   1 qvirrykleeeegfiscvlwknlfyitgtdivkilvykleafGrkitdkkkfeeGifsdlrnlkigvdavleepksefldllyknkclrtqkkqkvfyw 99 
                 q irr+ l++ e ++scvlw+nlf+i+gtdiv++l+++++afGr ++++kkfeeGifsdlrnlk g+da+leepks fld+lykn+c+rtqkkqkvfyw
  KHJ33255.1  49 QYIRRFLLPTGE-YVSCVLWNNLFHISGTDIVRCLSFRFQAFGRPVKNSKKFEEGIFSDLRNLKSGTDASLEEPKSGFLDFLYKNNCIRTQKKQKVFYW 146
                 679********9.************************************************************************************** PP

         STE 100 fsvphdklfld 110
                 +svphd+lfld
  KHJ33255.1 147 YSVPHDRLFLD 157
                 *********98 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   3.2   5.2e-07   0.00093       1      23 []     546     570 ..     546     570 .. 0.96
   2 !   27.7   2.0   1.3e-09   2.3e-06       1      23 []     576     598 ..     576     598 .. 0.99

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 5.2e-07
                 EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                 + Cp   Cg+ Fkr ++LkrH rtH
  KHJ33255.1 546 HSCPipTCGRLFKRLEHLKRHVRTH 570
                 689999******************9 PP

  == domain 2  score: 27.7 bits;  conditional E-value: 1.3e-09
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 y+Cp+C+k F+r++nL +H rtH
  KHJ33255.1 576 YVCPHCNKAFSRSDNLAQHKRTH 598
                 9*********************9 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.3      0.59   1.1e+03      12      26 .]     543     559 ..     539     559 .. 0.85
   2 !   33.5   4.9   1.9e-11   3.4e-08       1      25 [.     562     586 ..     562     587 .. 0.96
   3 ?   -0.5   0.1       1.1     2e+03       1       9 [.     590     598 ..     590     604 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.59
   zf-H2C2_2  12 ekpyeCp..lCdkaFkt 26 
                 +k + Cp   C+  Fk+
  KHJ33255.1 543 QKSHSCPipTCGRLFKR 559
                 67899**999**99985 PP

  == domain 2  score: 33.5 bits;  conditional E-value: 1.9e-11
   zf-H2C2_2   1 nLrrHirkHtgekpyeCplCdkaFk 25 
                 +L+rH r+Ht+e+py Cp C+kaF+
  KHJ33255.1 562 HLKRHVRTHTQERPYVCPHCNKAFS 586
                 79**********************8 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 1.1
   zf-H2C2_2   1 nLrrHirkH 9  
                 nL +H r+H
  KHJ33255.1 590 NLAQHKRTH 598
                 7999***** PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   2.3   1.7e-05     0.031       2      23 ..     547     570 ..     546     571 .. 0.94
   2 !   20.9   1.1   2.3e-07   0.00041       1      23 [.     576     598 ..     576     599 .. 0.96

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.7e-05
   zf-C2H2_4   2 kCpi..CgksFsskkaLlrHlkth 23 
                  Cpi  Cg+ F++ ++L+rH++th
  KHJ33255.1 547 SCPIptCGRLFKRLEHLKRHVRTH 570
                 799999*****************9 PP

  == domain 2  score: 20.9 bits;  conditional E-value: 2.3e-07
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 + Cp+C+k Fs++++L +H +th
  KHJ33255.1 576 YVCPHCNKAFSRSDNLAQHKRTH 598
                 89********************9 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.14   2.6e+02       6      24 ..     552     570 ..     551     570 .. 0.91
   2 !   15.8   0.3   7.1e-06     0.013       2      24 ..     576     598 ..     575     599 .. 0.93

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.14
                  TTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz   6 lCdKyFksenaldnHlkSK 24 
                  +C + Fk  + l+ H++++
   KHJ33255.1 552 TCGRLFKRLEHLKRHVRTH 570
                  799************9986 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 7.1e-06
                  CBBTTTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHlkSK 24 
                  + C++C+K F+ + +l +H++++
   KHJ33255.1 576 YVCPHCNKAFSRSDNLAQHKRTH 598
                  77******************986 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.8      0.12   2.2e+02       6      25 ..     552     571 ..     546     573 .. 0.87
   2 !   18.4   0.3   8.6e-07    0.0015       2      24 ..     576     598 ..     576     601 .. 0.95

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.12
   zf-C2H2_6   6 vCsksFpslqaLggHkksHr 25 
                 +C++ F+ l  L  H ++H 
  KHJ33255.1 552 TCGRLFKRLEHLKRHVRTHT 571
                 8********99999999995 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 8.6e-07
   zf-C2H2_6   2 heCsvCsksFpslqaLggHkksH 24 
                 ++C+ C+k F+  ++L  Hk++H
  KHJ33255.1 576 YVCPHCNKAFSRSDNLAQHKRTH 598
                 89********************* PP

>> zinc_ribbon_9  zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.3   2.5e-05     0.045      10      31 ..     565     585 ..     564     585 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2.5e-05
  zinc_ribbon_9  10 rfVsvspdedsdvlCPhCgggF 31 
                    r+V+ ++ e + v CPhC+  F
     KHJ33255.1 565 RHVRTHTQERPYV-CPHCNKAF 585
                    8999999999999.*****998 PP

>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   4.1   0.00026      0.47       6      49 ..     551     595 ..     544     600 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00026
     zf-Di19   6 PyCgk.eltvkeLveHvedeHrveskevvCPvCaekvt..kdlvaHl 49 
                 P Cg+     + L +Hv + H+ +++++vCP C +  +  ++l++H 
  KHJ33255.1 551 PTCGRlFKRLEHLKRHVRT-HT-QERPYVCPHCNKAFSrsDNLAQHK 595
                 5699944556889999999.65.567899****98755226999995 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.98   1.8e+03       5      21 ..     552     568 ..     551     571 .. 0.85
   2 ?    9.1   0.9   0.00095       1.7       1      21 [.     576     596 ..     576     598 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.98
      zf-met   5 lCnvtfnsesqlksHlq 21 
                  C + f+   +lk H +
  KHJ33255.1 552 TCGRLFKRLEHLKRHVR 568
                 69999**********87 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00095
      zf-met   1 fyCelCnvtfnsesqlksHlq 21 
                 + C+ Cn+ f+   +l +H +
  KHJ33255.1 576 YVCPHCNKAFSRSDNLAQHKR 596
                 78*****************76 PP

>> zf-C2HC_2  zinc-finger of a C2HC-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.6     0.095   1.7e+02       6      21 ..     551     567 ..     548     569 .. 0.77
   2 ?    7.1   0.5    0.0028       5.1       5      22 ..     578     596 ..     577     597 .. 0.93

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.095
   zf-C2HC_2   6 pkCgRsF.npdrlekHe 21 
                 p CgR F   + l +H+
  KHJ33255.1 551 PTCGRLFkRLEHLKRHV 567
                 79*****6666666665 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0028
   zf-C2HC_2   5 CpkCgRsF.npdrlekHep 22 
                 Cp+C+  F  +d l+ H++
  KHJ33255.1 578 CPHCNKAFsRSDNLAQHKR 596
                 *****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (680 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       758  (0.0422779); expected 358.6 (0.02)
Passed bias filter:                      571  (0.0318478); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 4868.06
//
Query:       KHJ33256.1  [L=315]
Description: putative nuclear transcription factor y [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.9e-28   96.7   4.7    2.1e-27   95.5   4.7    1.7  1  CBFB_NFYA  CCAAT-binding transcription factor (CBF-B/NF-YA) s
  ------ inclusion threshold ------
        5.4    6.9  22.2        7.2    6.5  22.2    1.2  1  TFIIA      Transcription factor IIA, alpha/beta subunit


Domain annotation for each model (and alignments):
>> CBFB_NFYA  CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.5   4.7   2.4e-31   2.1e-27       2      56 .]     190     245 ..     189     245 .. 0.98

  Alignments for each domain:
  == domain 1  score: 95.5 bits;  conditional E-value: 2.4e-31
   CBFB_NFYA   2 plyVNakQynrIlkRReaRakleaelkl.rkarkkylheSRhkhAmrRpRgpgGRF 56 
                 plyVNakQ++rIlkRR aR+kle++l+  +k rk+ylheSRh+hAmrRpRgpgGRF
  KHJ33256.1 190 PLYVNAKQFHRILKRRVARQKLEENLRAtSKLRKPYLHESRHNHAMRRPRGPGGRF 245
                 9***************************9**************************9 PP

>> TFIIA  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5  22.2   0.00081       7.2      56     221 ..       7     207 ..       2     312 .. 0.34

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.00081
       TFIIA  56 qspqfvlqlpqslkqalq..asaaaasqapastsqslpslvipagksvqsltanssaataatfslpakleppvqipagvtlqtasg........qlykv 144
                 q+pq++++ +++ + ++   +sa+++ ++p+ ts+ +p l +p+++       +  ++++ ++ +p +++   q+  g+t q a          q y+ 
  KHJ33256.1   7 QTPQQTQHGHSQGHLQATysNSAQHQGSNPSMTSSPQPILPQPDQQ-------SHPMHQQLNYPTPYGVSH-HQLQYGMTPQAAAIaataaatgQGYQY 97 
                 3333333333333322222122221222222222222222222222.......222233333333434433.333344444444432222222233333 PP

       TFIIA 145 nv....qasgaqqiaaqplqqvvqqsqgsaaqssvaalqaqsqqaqalaepqqqlekq.................qqqqqqqqqqqqqqqvqqqqqe.. 220
                 n+     a++  ++   +++q ++q+++++ ++++a++q+q +  ++++ p  q+  q                        ++ q+q        e  
  KHJ33256.1  98 NIqgtgIAQSSPRMSGINVKQELSQGSPKQLNNQMAHVQSQGRRVAQMSSPAVQAP-QpimnhgpprsmippmagS------HHLQHQP-------Elg 182
                 33223222222222222333333344555555555555555333333333333322.1133333322221111110......1111111.......111 PP

       TFIIA 221 ........................e 221
                                          
  KHJ33256.1 183 elasdesplyvnakqfhrilkrrvA 207
                 1111122222222222222221111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2455.88
//
Query:       KHJ33257.1  [L=750]
Description: putative pyridine nucleotide-disulfide oxidoreductase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.3e-05   22.1   0.0     0.0003   20.4   0.0    1.8  1  Peptidase_S41  Peptidase family S41


Domain annotation for each model (and alignments):
>> Peptidase_S41  Peptidase family S41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   1.7e-08    0.0003       1     110 [.     367     566 ..     367     580 .. 0.69

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 1.7e-08
                    EEEEEEES-BCC....THHHHHHHHHHHHHHTTSSEEEEE-TTB-EBEHHHHHHHHHCCSSSSEEEEEECTTSEEE.................... CS
  Peptidase_S41   1 kiGyiripsfse....ktkeelakalkelkkknvkglilDlRnNgGGlldeavelaslflddglivstrgrdgkkk.................... 72 
                    +++++ i sf++    +t++ ++  ++e  + +  ++i+Dl++N GG+l   ++  + f++  +   + + +  +                     
     KHJ33257.1 367 DVAVLVIFSFQAksvlQTQSVIQTLIAECLSLGKTKMIIDLSSNSGGNLVVGYDTFRQFFPTIEQPGYSRFRLHEAlkiitkqiskiasnfsftst 462
                    68999*****7777888888888888888889***************************9954444444333333345777778888888888777 PP

                    ......................................................EEEHTCSS-S....................TT-BSSEEEEEE CS
  Peptidase_S41  73 ......................................................kksktekase....................evqykgplvvLv 94 
                                                                                   +                    +  +  ++++L 
     KHJ33257.1 463 nptdydyyqtpfnyrfdlnetnekflsyedkfsprkfngdeftsnmrwdledptM--------TsstwgsginvtgygdrknfiQPFKPENIILLH 550
                    7777777777777777777766666666666666555555555544444333330........144444555555555555566677788888888 PP

                    -TTBBTHHHHHHHHHH CS
  Peptidase_S41  95 negsaSaseifagalk 110
                    ++ +aS   if+++++
     KHJ33257.1 551 DGVCASTCAIFSEFMR 566
                    8888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (750 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.23s 00:00:00.83 Elapsed: 00:00:00.39
# Mc/sec: 5703.51
//
Query:       KHJ33258.1  [L=759]
Description: hypothetical protein EV44_g3270 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0031   17.3   1.3      0.018   14.9   0.0    2.5  2  gag_pre-integrs  GAG-pre-integrase domain


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.2     0.042   7.5e+02      46      64 ..     441     459 ..     436     460 .. 0.78
   2 !   14.9   0.0     1e-06     0.018      20      44 ..     723     747 ..     712     756 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.042
  gag_pre-integrs  46 gllpglkisksevCeaCql 64 
                       l ++++is++++C +C +
       KHJ33258.1 441 LLSSRNTISDKNKCLICKK 459
                      45577899*********75 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1e-06
  gag_pre-integrs  20 nkssinlWHrRLGHpsfsrlkkLfk 44 
                      ++++++  HrR+GHps++r  +L+ 
       KHJ33258.1 723 SENELRQLHRRFGHPSVRRFVNLMT 747
                      5789999************999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (759 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       813  (0.0453455); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.42
# Mc/sec: 5484.48
//
Query:       KHJ33259.1  [L=261]
Description: hypothetical protein EV44_g1477 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      259  (0.0144459); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.21s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1997.62
//
Query:       KHJ33260.1  [L=764]
Description: hypothetical protein EV44_g1149 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.029   13.5   0.4      0.085   11.9   0.3    1.8  2  COG4      COG4 transport protein


Domain annotation for each model (and alignments):
>> COG4  COG4 transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.13   2.4e+03       6      63 ..     371     428 ..     368     450 .. 0.77
   2 ?   11.9   0.3   4.7e-06     0.085     177     215 ..     462     502 ..     431     546 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.13
        COG4   6 esLlelfleeFekAakenDkaeitrffkLFpligreeeGLdlYskyvceivaerarke 63 
                 e+L  lf+++  + a  +D a+    +  +++  ++e G +++ ++v +  +e+ +++
  KHJ33260.1 371 ERLEALFRRAYSSFAPTKDNAAAIAPTGCLDQMWWNEIGKKKFNNFVQTSSIETDEAI 428
                 7899999999999999999999888888888889999998888888887666665554 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 4.7e-06
        COG4 177 esseeeegvdpreidalleEislmlsrwelYs..rFlaskl 215
                  +see++++  +eid++l+Eis++l+  ++Y   r l+s l
  KHJ33260.1 462 LQSEEDKAIHEKEIDEVLKEISQLLETLASYQqiRHLSSNL 502
                 5799999************************7335666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (764 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       972  (0.0542138); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.27s 00:00:00.97 Elapsed: 00:00:00.42
# Mc/sec: 5469.39
//
Query:       KHJ33261.1  [L=136]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       547  (0.0305092); expected 358.6 (0.02)
Passed bias filter:                      245  (0.013665); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.21s 00:00:00.55 Elapsed: 00:00:00.35
# Mc/sec: 1178.66
//
Query:       KHJ33262.1  [L=139]
Description: hypothetical protein EV44_g1321 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.072   12.7  19.2       0.22   11.2  19.2    1.7  1  Lebercilin     Ciliary protein causing Leber congenital amaur
        1.7    9.0   8.5        3.6    7.9   0.9    2.0  2  TINF2_N        TERF1-interacting nuclear factor 2 N-terminus
        2.9    6.4  11.1        3.3    6.2  11.1    1.0  1  Peptidase_S46  Peptidase S46
        5.2    4.9   8.7        5.8    4.7   8.7    1.0  1  V_ATPase_I     V-type ATPase 116kDa subunit family


Domain annotation for each model (and alignments):
>> Lebercilin  Ciliary protein causing Leber congenital amaurosis disease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2  19.2   4.9e-05      0.22       9     123 ..       7     125 ..       5     135 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4.9e-05
  Lebercilin   9 rllkikeLqnelaelqskleelrkE.nklLkrlqkrqekaLskyedteaeLpqlla....rhneEvrvlrerlRksqekerelekklkekeaellrlkd 102
                 r+ k+ e + +++e  +++e +++E n+++++l k q+++ ++  ++e e++q  +    +h eEvr+ re++R++qe+ re e +l++ ea  +   +
  KHJ33262.1   7 RTAKMLEYERQAEERMREMEIMNEErNRMVEELIKIQQEQ-DRIAQEEYEIAQYYEaealKHAEEVRIHREEVRRHQERIREHEARLRDHEATAEAFAK 104
                 6678888888999999999999888789999999999877.78888889998887644447******************************99888777 PP

  Lebercilin 103 klkklkkLsedknLaereeLq 123
                  + + ++  +d++   ++ L 
  KHJ33262.1 105 IIATPSQQTRDRQVSFQASLG 125
                 777666666666665555555 PP

>> TINF2_N  TERF1-interacting nuclear factor 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   1.7    0.0047        21      74     114 ..      15      55 ..       6      66 .. 0.85
   2 ?    7.9   0.9    0.0008       3.6      58     113 ..      67     124 ..      56     127 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0047
     TINF2_N  74 akstkkkdekveeaqenflklvqsLledpeerekflqeefp 114
                 +++++++ +++e ++e+ +++v++L++ ++e+++  qee +
  KHJ33262.1  15 ERQAEERMREMEIMNEERNRMVEELIKIQQEQDRIAQEEYE 55 
                 367889999**************************999876 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0008
     TINF2_N  58 dlkaiqshlerlrasaa..kstkkkdekveeaqenflklvqsLledpeerekflqeef 113
                 ++++++ h e++r +++  +++++++++ e++ e f+k++ + ++++ +r+  +q  +
  KHJ33262.1  67 HAEEVRIHREEVRRHQEriREHEARLRDHEATAEAFAKIIATPSQQTRDRQVSFQASL 124
                 555666666666665556688999***************************9999765 PP

>> Peptidase_S46  Peptidase S46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2  11.1   0.00073       3.3     317     435 ..       4     118 ..       2     135 .. 0.73

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.00073
                    HHHHHTTHHHHHHHHHHHHHHHHHHCT-H.HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHH.....HH-HHHHHH CS
  Peptidase_S46 317 ealkkkkvlekkqaeeaalrawlkkdpekkekygkalselealvkekrklaersalleeaessgsellslarklvrlaeere.kpdaereeeyqer 411
                    ++ ++ k+le  +++e+++r++   ++e+    +++++el ++++e++++a++++ + +     +e l+ a+++    ee + +++  re+e++ r
     KHJ33262.1   4 RGTRTAKMLEYERQAEERMREMEIMNEER----NRMVEELIKIQQEQDRIAQEEYEIAQYYE--AEALKHAEEVRIHREEVRrHQERIREHEARLR 93 
                    57788899999999999999988887775....57899999999999999988887775544..45777777666555554413555688888999 PP

                    HHHHHHHHCHHHH.CS--HHHHHHH CS
  Peptidase_S46 412 alealekelerid.kdldaevdkav 435
                    ++ea+ +++++i  ++ +++ d++v
     KHJ33262.1  94 DHEATAEAFAKIIaTPSQQTRDRQV 118
                    9999999888887456666677766 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   8.7    0.0013       5.8      30     119 ..      16     109 ..       3     136 .. 0.47

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0013
  V_ATPase_I  30 rrcdemerklrfleeeieklekavikeeeaeesleapeekeldeleeelekleeel....kelnenleklkkelnelvelkavlekakefleee 119
                 r+ +e  r++++++ee +++ ++ ik ++++++ +++e +  + +e+e  k+ ee+    +e+++++e+++++  +l +++a  e  ++++++ 
  KHJ33262.1  16 RQAEERMREMEIMNEERNRMVEELIKIQQEQDRIAQEEYEIAQYYEAEALKHAEEVrihrEEVRRHQERIREHEARLRDHEATAEAFAKIIATP 109
                 4555555555556555555555555544432222222222222223333333333211113455555555555555555555555555555433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2191  (0.122204); expected 358.6 (0.02)
Passed bias filter:                      577  (0.0321825); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.20s 00:00:00.63 Elapsed: 00:00:00.34
# Mc/sec: 1238.50
//
Query:       KHJ33263.1  [L=418]
Description: putative uracil-dna glycosylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.6e-23   81.2   0.1    1.3e-22   80.4   0.1    1.4  1  UDG       Uracil DNA glycosylase superfamily


Domain annotation for each model (and alignments):
>> UDG  Uracil DNA glycosylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.4   0.1   7.5e-27   1.3e-22       4     151 ..     126     287 ..     123     291 .. 0.90

  Alignments for each domain:
  == domain 1  score: 80.4 bits;  conditional E-value: 7.5e-27
                 -CTT-SEEEEESSTCHH.HHHHSSSS.-STT.--HHHHHHH.CCCCCCCHHG................CTEEEEESSS....SEC.GCTTCCCCTCCHH CS
         UDG   4 gppdakvvivGeaPgae.edatglpFsgrag.nllrkllne.aglkrdlese................qgvyitnvvkcrppgnr.dtptsaeikacap 82 
                 + p +k vi+G++P+++ ++a+gl Fs+++    +++l n+ + lk+d++++                qgv+++n+++    + r ++ +s+  +++++
  KHJ33263.1 126 PLPTVKAVILGQDPYHNfSQAHGLSFSVKPPtAPPPSLRNIfIALKNDYPNNfrpppqntgqltpwanQGVLLLNTCL----TVRaHEANSHA-NRGWE 219
                 567899**********************666266667777788999988888**************************....866699*****.***** PP

                 .HHHHHHHHHH.....SSEEEEESHHHHHH..HHHHSCESCCCSCT.SEEEEES-SSTTTTT..TTTSHHHHHHHHH CS
         UDG  83 .lleeeiellk.....prlivllGktaakallgeklgklrgklleakirvlplphPsplnrn..ffksnpelkaeaw 151
                  ++++ i+++        +++++G+ a k++         +k+ ++++ vl + hPspl+++  +f++ +++k+++w
  KHJ33263.1 220 aFTQRVIDIVAkrrtsGVVFLAWGTPARKRV---------DKVDKTRHLVLLSVHPSPLSASrgWFECGHFRKTNEW 287
                 ***********99995666***********8.........8888888****************************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (418 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1491  (0.0831614); expected 358.6 (0.02)
Passed bias filter:                      562  (0.0313459); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.37
# Mc/sec: 3351.54
//
Query:       KHJ33264.1  [L=493]
Description: putative f-box domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-11   42.9   0.2    9.8e-11   41.4   0.2    1.9  1  F-box-like       F-box-like
    3.2e-05   23.7   0.3    8.1e-05   22.4   0.3    1.8  1  F-box            F-box domain
  ------ inclusion threshold ------
      0.014   15.3   0.2      0.029   14.2   0.2    1.5  1  F-box_4          F-box
      0.045   13.7   0.3       0.12   12.3   0.3    1.7  1  Cytokin_check_N  Cdc14 phosphatase binding protein N-terminus
      0.089   12.9   0.0       0.21   11.7   0.0    1.6  1  MIT              MIT (microtubule interacting and transport) 


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.2   2.7e-14   9.8e-11       2      47 ..     195     243 ..     194     244 .. 0.90

  Alignments for each domain:
  == domain 1  score: 41.4 bits;  conditional E-value: 2.7e-14
  F-box-like   2 srLPdEiLlqIFsy...LppsdLlrlalVCrrWrrvaldtplLWrrlvl 47 
                 ++LPdEiL++I+     L+  + +r+a+VC++ + ++++++++Wrr+++
  KHJ33264.1 195 ASLPDEILVHILMSlaiLDVASFVRIAQVCKKLAYLVATEQQIWRRICI 243
                 79**********633448999***************************7 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.3   2.3e-08   8.1e-05       2      37 ..     193     231 ..     192     242 .. 0.91

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 2.3e-08
                 HHHHS-HHHHHHHHHTS-HHH...HHHHCTT-HHHHHHH CS
       F-box   2 tlsrLPsevlrhILerLplsd...llalrrVSkgwrili 37 
                 +l +LP+e+l hIL +L   d    +++++V+k++  l+
  KHJ33264.1 193 PLASLPDEILVHILMSLAILDvasFVRIAQVCKKLAYLV 231
                 6889******************************98887 PP

>> F-box_4  F-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.2   8.2e-06     0.029       3      39 ..     192     231 ..     190     241 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 8.2e-06
     F-box_4   3 dsLssLPlevlqhia...slLDsfsLsqLslvskllrevc 39 
                 + L sLP e+l hi+   ++LD  s++++++v+k+l  + 
  KHJ33264.1 192 CPLASLPDEILVHILmslAILDVASFVRIAQVCKKLAYLV 231
                 6799**********7333689*************998765 PP

>> Cytokin_check_N  Cdc14 phosphatase binding protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.3   3.4e-05      0.12      18      65 ..     125     171 ..     119     175 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.4e-05
  Cytokin_check_N  18 seeiverfk.klYPdeeeleIlslqdenecDLDpdflvkdvFesdnlvr 65 
                       + + +++k k +P e++++++ l+     DL  df  + +F++++lv 
       KHJ33264.1 125 DHRVDRKYKnKYFPTEKSIQVVDLKST--QDLKSDFPNEAIFDKKDLVE 171
                      566777876267799*********976..59***************996 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   5.9e-05      0.21       1      31 [.      92     122 ..      92     124 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5.9e-05
         MIT   1 ldkAlelvkkAveeDnagnyeeAlelYkeal 31 
                 l +Al+  + Av+++  gn  e l+lY++a 
  KHJ33264.1  92 LATALDHYELAVKREDDGNLGESLDLYRKAF 122
                 5789999**********************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (493 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       645  (0.0359752); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.21s 00:00:00.72 Elapsed: 00:00:00.36
# Mc/sec: 4082.15
//
Query:       KHJ33265.1  [L=887]
Description: putative glycosyl hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.9e-139  465.5   0.2   4.7e-139  464.3   0.2    1.6  1  Glyco_hydro_92   Glycosyl hydrolase family 92
    1.2e-51  176.0   3.1    2.3e-51  175.0   3.1    1.5  1  Glyco_hydro_92N  Glycosyl hydrolase family 92 N-terminal doma


Domain annotation for each model (and alignments):
>> Glyco_hydro_92  Glycosyl hydrolase family 92
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  464.3   0.2  5.2e-143  4.7e-139       2     461 ..     320     867 ..     319     868 .. 0.92

  Alignments for each domain:
  == domain 1  score: 464.3 bits;  conditional E-value: 5.2e-143
                     HHHHHHHHTTT--HHHHHHHHHHHHHHH.HTTEEEES.S-HHHHHHHHHHHHHHTTSSEE--EE-TTE-TTTSSEEE.S--EESEEHHHHTTTHH CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_92   2 ArknleaEipdldfekvraaareaWnek.Lskieveg.gtedqkttFYtalYhallapneysdvdgeYsglddkvhkegksYttfslWDtyRaqh 94 
                     A++  ++Eip++++++v+++a++ Wn++ Lski+ ++ ++++++++FYt+lYh+ l+p++ ++ + ++   +++  + +++Yt   +WDt+R+++
      KHJ33265.1 320 ACSFKQNEIPGWNLSTVVENAKNVWNNEvLSKITTTDlSNQTRLEMFYTGLYHTALMPTDKTGQNPHWE--TNE-PTYDDYYT---FWDTFRCLN 408
                     9999******9************************8856************************888887..333.12235566...********* PP

                     HHHHHH-HHHHHHHHHHHHHHHHHHSS--SEESSS.B---S-S-THHHHHHHHHHTT--...-S-HHHHHHHHHHHHHB-S-TT..........T CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxx.........x RF
  Glyco_hydro_92  95 plltlldperasdmvrslldiykeggwlpdwrlsnsetavmgGsnadvvladayvkgir...dfdvekayealvkdaeeepeaad.........k 177
                     +ll l+ pera+ ++rs +di+++++++pd+r+  ++++v+gGs ad+vladayvkg++   +++  +ay+a++++ae +p++++         k
      KHJ33265.1 409 SLLLLILPERAAGIIRSSIDIWRHERFMPDGRSGFYNGQVQGGSDADNVLADAYVKGLKggiNWK--DAYAAMKTNAELTPYNTNdagdptssvK 501
                     ***********************88********************************98855555..***********88844445899999*99 PP

                     BTTT.HHHHHHHSS--T..TTTTHHHHHHHHHHHHHHHHHHHHHTT-HHH.HHHHTTGGGGGGGEETT......TTCE--B-TTS-B-SS--TT- CS
                     xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_92 178 errg.lesylklgYvpakedesesvsrtlEyaydDfaiaqlAkalgkkedaekylkrsknwrnlfdpe......tgfmrprnadGtwaepfdpse 265
                     e+rg l ++lk+g+++   + s+svsrt+Ey+++Df++aqlAk  + +e+++kyl+rs+ w+ +++++      tgf++p  adG+   +++p  
      KHJ33265.1 502 EGRGaLPDWLKYGWITP--RFSRSVSRTVEYSLNDFSVAQLAKDFE-PESYQKYLNRSAGWQYIWQHDlyslnyTGFLAPLFADGARDPKYSPAG 593
                     999999**********9..559***********************7.89**************************************98888876 PP

                     -.....STTSS.SS-HHHHTT--TT-HHHHHHHHTSHHHHHHHHHHHS----TTG.....HHHHHHHTSS-TT-GGGTTGGGGGGGT.T-HHHHH CS
                     xx....xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx RF
  Glyco_hydro_92 266 dp....eegft.EgnawqysffvphDvagLielmGGkeafvkrLdslfeeeekks.....edsaglsgqydhgNEpsfhtpylYnya.gapwktq 349
                      +    + ++t E+ aw+ys++vphD+++Li++mGG++ +++rLd++f + +++s      ++ + +++y++gNEpsf+tp lYny+ g+++k+ 
      KHJ33265.1 594 CDggceAVSYTyEALAWEYSWTVPHDMQTLISFMGGPNLTESRLDAMFIPGGRSSgvgigGNNGVGDTLYNPGNEPSFSTPLLYNYIqGRQYKSV 688
                     658996346888************************************8777777899999999999********************9******* PP

                     HHHHHHHHHSB-SSTT-BSSTTTSSTTHHHHHHHHHTEE-SSTTS-EEEE---SSSEEEEE-GGG-EEEEE-...TT-................. CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxx................. RF
  Glyco_hydro_92 350 ervreildelynntpdGlpGndDaGqmsawyvfsalGlYpvapgspeyllgsPlfekvtirlengktltiea...knn................. 424
                      r+r++++++y+++++GlpGn+D+G++ +w++++++GlYpv +++p+yl++sP+f+++++++++gk l+i++     n                 
      KHJ33265.1 689 LRSRQVVNTYYSSGRSGLPGNSDSGAIDSWMMWQMIGLYPV-VTQPVYLITSPWFNNLNMTVGDGKFLHITStivG-Nkknslkqsqshqmmkfr 781
                     *****************************************.****************************885551.15568999999******* PP

                     .................................................BTTB-EEEEEEETTEE---.EEEHHHHHT-EEEEEEEE CS
                     .................................................xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_92 425 .................................................saenvyvqsvtlnGkplkk.wlthediakGgtLefelg 461
                                                                      + +  yvq++++nG+ +++ wl+h+di++GgtLef+lg
      KHJ33265.1 782 tnfrrspltphpeephpedaisvsevsskdnsttpmgafdipengaqsdN-QPWYVQNLRVNGQLWNRsWLSHSDIQDGGTLEFVLG 867
                     ********************************************999743.456************777****************98 PP

>> Glyco_hydro_92N  Glycosyl hydrolase family 92 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.0   3.1   2.6e-55   2.3e-51       1     237 []      47     313 ..      47     313 .. 0.89

  Alignments for each domain:
  == domain 1  score: 175.0 bits;  conditional E-value: 2.6e-55
  Glyco_hydro_92N   1 yVnpliGTggg........ghtfpgatlPfGmvklspdtr...enwdsqagYeyddssitgFshthlsGtggg.dlgdvslmPttgevkldpgk 82 
                      yV p+ GT+g+        g++fpg+ lPfG vkl+pdt+     ++++agY+ +d+++tgFs+th sGtggg  +g vs+mP+ +  +++   
       KHJ33265.1  47 YVKPFLGTEGTrpgtafngGNIFPGVVLPFGSVKLGPDTTcytPFTEANAGYT-PDGNVTGFSLTHVSGTGGGpVYGVVSQMPLPSLANVN--- 136
                      9*******9999****************************98555999*****.9******************************988765... PP

  Glyco_hydro_92N  83 kkkdkeeyrsrfskedetaspgyYsvtlddygikaelTateragllrftFpkgkeanilvdlsdsl.ssd.......kvsngsikv.vddreis 167
                         d+ +y+++  +  ++as+gyY+ t+ + gi +el+at+ +g+l+++Fp++  ++ilvd+s+ l + +        + ng+i+v +d r+++
       KHJ33265.1 137 -LIDNLTYEAPR-RGLDEASVGYYKSTFLN-GIVTELAATRNVGMLQYSFPSE--SHILVDVSHYLpT-TeggyqsqFYANGKISVsDDGRTYQ 224
                      .34677777765.57899************.********************86..89********954.4599999999*******99****** PP

  Glyco_hydro_92N 168 Gyrtsrg.fglagsykvYfvarfskpfksfgvwkggevt.............egaksasgk........elgayvsFdtkegetvevrvGiS 237
                      Gy+ ++g f++ +sy+vYf+ +f+  + +++v++g  ++             ++++s+sg         ++ga++sF t   ++v+++vGiS
       KHJ33265.1 225 GYGIYKGaFSEIPSYQVYFCGEFDSVPIDAKVFSGIYTDpyspaelkaqpeySESRSVSGGpsnylfgrRVGAVFSFGT---QNVKSKVGIS 313
                      ************************99999****655555666666666666655555555588888888**********...99*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (887 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       297  (0.0165653); expected 358.6 (0.02)
Passed bias filter:                      254  (0.014167); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.41
# Mc/sec: 6531.19
//
Query:       KHJ33266.1  [L=983]
Description: putative morphogenesis protein msb1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-162  542.1   0.9   2.2e-162  541.1   0.0    1.9  2  DUF1708   Domain of unknown function (DUF1708)


Domain annotation for each model (and alignments):
>> DUF1708  Domain of unknown function (DUF1708)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  541.1   0.0  1.2e-166  2.2e-162       2     431 .]      44     507 ..      43     507 .. 0.96
   2 ?   -4.0   2.2      0.33     6e+03     298     382 ..     863     950 ..     837     953 .. 0.55

  Alignments for each domain:
  == domain 1  score: 541.1 bits;  conditional E-value: 1.2e-166
     DUF1708   2 vereevkelihliteelKargldtpfllLpFrpesdpsalrtflrnfFpkgqeegsslkgeellqelrktdiltLisvlkylWsrlpggvvgwdaYeeF 100
                 ve+eev+el+h +  e+Kargldtpf++Lp+rp+sdpsa+rtf+rn+F++      +l+g++l+qelr+t+++ L+ v+k++Wsrlpggvvgw+aYe F
  KHJ33266.1  44 VEPEEVQELLHGCLLEVKARGLDTPFVFLPYRPTSDPSAARTFIRNYFEQ------KLRGDQLVQELRLTSSMALCTVMKWCWSRLPGGVVGWEAYELF 136
                 89***********************************************5......59***************************************** PP

     DUF1708 101 kkkEkeselprdaFltfipkslssearasivydFldLlvaiaahgkknglggrklsrlaglwAFehkdkgnsfeeglkswskaadAlshLflayLrsll 199
                 +++E +s+++r +F+tf+p s++s+ r++i++dF+dLl+aiaah+k nglggrklsrlag+wAF+++d gn fe+g+++w++aa+A+shLf+ayLrsl+
  KHJ33266.1 137 RVGELDSNMARYSFATFVPLSVDSDTRSKIIFDFFDLLSAIAAHSKVNGLGGRKLSRLAGWWAFDQSDGGNCFEGGYTKWTSAANATSHLFFAYLRSLS 235
                 *************************************************************************************************** PP

     DUF1708 200 pekeketeg.sklprsLqkllqeteYPPekstllqsstlltvplvvlivdkvsptpfaLLrrakktlkfdnkdaFeareddalLkelfkeledivkals 297
                 p+++k  +g s lp sLqkll+et+YPP+  +++qs+t    p+v +iv+++sptpfaLLrra++         F++r++d++L e++ e+ d+v++l+
  KHJ33266.1 236 PDSSKGLNGiSILPVSLQKLLEETDYPPKPLKRMQSKT----PRVLMIVETISPTPFALLRRANR---------FQYRDEDKALMEFA-EYMDPVESLT 320
                 *********999****************999999****....***********************.........**************.********** PP

     DUF1708 298 eeskrvlkaissanqsq..ss..stsledaswsrfkdigfeagl..eeee........................rpttpsWadflssgl.......... 356
                 +e++rvl+ iss+nqsq  +s   +++ d swsrf+d+gf++g   ++ e                        rpttpsWa+flssg+          
  KHJ33266.1 321 DECRRVLDLISSENQSQpfNSkeLEGMVDLSWSRFEDLGFSDGFdfKK-EeeidfakryplisektnlaknamgRPTTPSWAEFLSSGFandlksvpsp 418
                 *****************96334577889***************96533.23699********************************************* PP

     DUF1708 357 ................kssqsdkkelelkeelepgelasvsrvdiddyFiwvWlsslsseetsekkalfGrslvieteikgfkkWlvveeq 431
                                 +ss+s+    +++++lepgelas++++ +dd+F+wvW+ssl+ ee  e+ka+fGr++++et i++ ++Wl +ee+
  KHJ33266.1 419 lllppdlslppieirsQSSHSHA-VDTNDSQLEPGELASIAKFYLDDAFWWVWISSLAAEELPERKAAFGRCALVETIIPD-GRWLLIEEK 507
                 **************766666665.5567788************************************************88.8******95 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 0.33
     DUF1708 298 eeskrvlkaissanqsqss.....stsledaswsrfkdigfeagleeeerpttpsWadflssglkssqsdkkelelkeelepgelasvsr 382
                 +e+k   ka+s+ +q  ++     ++s++d++ s    + f++ ++e ++ +    a+f+++g +s   d ++ e++ + e++ +++v+r
  KHJ33266.1 863 NEAKEAQKAFSNFDQGLTEdfsgaEKSVKDNDISV--TSRFQQEDNELRKSAEDQQAHFKENGSESGMADGAREEEEINGEESIEIRVAR 950
                 34444444444333333222333444444444333..45555554344455666667787778887777776655555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (983 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       763  (0.0425568); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.42
# Mc/sec: 7040.27
//
Query:       KHJ33267.1  [L=261]
Description: putative solute carrier family 25 member 40 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.4e-42  141.0   0.1    3.2e-20   71.8   0.0    2.9  3  Mito_carr        Mitochondrial carrier protein
  ------ inclusion threshold ------
      0.079   12.1   0.0       0.17   11.1   0.0    1.5  1  Serine_protease  Gammaproteobacterial serine protease


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.061   5.4e+02      75      89 ..       2      16 ..       1      18 [. 0.87
   2 !   65.1   0.0   4.5e-22   4.1e-18       5      95 ..      31     119 ..      29     121 .. 0.94
   3 !   71.8   0.0   3.6e-24   3.2e-20       3      96 ..     149     251 ..     147     252 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.061
                HHHHHHHHHHHHHHH CS
   Mito_carr 75 vapasalkfvlyetl 89
                 +pa+ ++f+ y+ l
  KHJ33267.1  2 GIPANIIYFTGYDWL 16
                589*********987 PP

  == domain 2  score: 65.1 bits;  conditional E-value: 4.5e-22
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 +++ l++G+ a ++a++++ P+++++tr+q+++  +++  ++++++ ++ki+ ++G + l+rGl+ +l r +p s+++++ ye+l + ++k
  KHJ33267.1  31 AWAPLVSGSSARILAGTAVSPIEMLRTRMQAASVGENH--FSRTVEGIQKIIADNGYSYLWRGLTLTLWRDVPFSGIYWTGYEFLTKKFTK 119
                 68899***************************999765..666******************************************999876 PP

  == domain 3  score: 71.8 bits;  conditional E-value: 3.6e-24
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.........CCCSSTTTSCSS.........HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqt.........qkksskksksaa.........ildvlkkiykeeGlrglyrGllpnllrvapasalkf 83 
                 ++++ ++l+G+l+ga+a+++t+P+dv Ktr q+                   ++         +++ l +i++eeGl+gl+rG++p+ l+vapa a++ 
  KHJ33267.1 149 VKFTDSFLSGALSGAFASFLTMPFDVGKTRRQVfvgkedlmnR---------RYnlaapeerpMIRFLWHIFQEEGLSGLWRGWIPRALKVAPACAIMI 238
                 68899****************************6554433321.........33345567777************************************ PP

                 HHHHHHHHHHCTT CS
   Mito_carr  84 vlyetlkrlllkk 96 
                 ++ye  k+ ++++
  KHJ33267.1 239 SSYEIGKQSFYRM 251
                 ******9999875 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   1.8e-05      0.17     159     195 ..     138     173 ..     121     184 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 1.8e-05
  Serine_protease 159 vedeiakflkindelynkllaGalsGviAtvlttifn 195
                      v+++i++      +++  +l+GalsG+ A++lt +f 
       KHJ33267.1 138 VNEKISRENE-AVKFTDSFLSGALSGAFASFLTMPFD 173
                      5566665544.3578999****************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1976.71
//
Query:       KHJ33268.1  [L=76]
Description: putative mitochondrial carrier [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      8e-07   28.9   0.0    8.8e-07   28.8   0.0    1.1  1  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.0   4.9e-11   8.8e-07       3      46 ..      15      58 ..      13      70 .. 0.84

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 4.9e-11
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCS CS
   Mito_carr  3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksa 46
                ls+ ++++++  +  +++l++tP+dvv++rlq+q   ++++ ++
  KHJ33268.1 15 LSAGQKMISAISGSFLSSLLVTPFDVVRIRLQSQIPPYSSNAKN 58
                67889999999999*******************99888876654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       265  (0.0147805); expected 358.6 (0.02)
Passed bias filter:                      216  (0.0120475); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 584.65
//
Query:       KHJ33269.1  [L=260]
Description: hypothetical protein EV44_g0250 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1302  (0.0726198); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2017.23
//
Query:       KHJ33270.1  [L=822]
Description: putative cysteinyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   7.2e-117  390.0   0.0   1.2e-116  389.3   0.0    1.3  1  tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
    3.6e-07   29.3   0.6     0.0075   15.1   0.0    2.8  3  tRNA-synt_1g  tRNA synthetases class I (M)
     0.0035   17.8   0.0     0.0096   16.4   0.0    1.8  1  DALR_2        DALR domain
     0.0041   16.1   0.1       0.33    9.8   0.1    2.3  2  tRNA-synt_1f  tRNA synthetases class I (K)


Domain annotation for each model (and alignments):
>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  389.3   0.0  2.7e-120  1.2e-116       4     292 ..      46     472 ..      43     480 .. 0.94

  Alignments for each domain:
  == domain 1  score: 389.3 bits;  conditional E-value: 2.7e-120
                   -SBTTEEEEEEEEEBTTS--BHHHHHHHHHHHHHHHHHHH.TT-EEEEEEEBB--SHHHHHHHHHTTS-............................ CS
  tRNA-synt_1e   4 pleekkvtlYvCGptvydashlGhaRslvafDilrrilqa.lgYdvqfvqnvtDidDkiikrareeeks............................ 71 
                   p+ee+kv++Y CGptvyd+shlGhaR++v++Di+rri+++ +g++v+fv n+tD+dDkii++ar++++                             
    KHJ33270.1  46 PIEEGKVSWYACGPTVYDHSHLGHARNYVSTDIIRRIMRDyFGFKVRFVMNITDVDDKIILKARRHKLLeleklkpyteselvklaaiafnsyalvn 142
                   7899***********************************99************************99999*************************** PP

                   ..............................................................................................HHH CS
  tRNA-synt_1e  72 ..............................................................................................vke 74 
                                                                                                                 +++
    KHJ33270.1 143 lpdiikfdeseeltienfnsrrdnvygrvlaggslggdgnpgdieakikmhlanltsasdaikkkkifggadevllpyldtlykdsidgkdhgiFTK 239
                   ************************************************************************************************* PP

                   HHHHHHHHHHHHHHHTT----SB--BGGGGHHHHHHHHHHHHHTTSEEE-TTS-EEE-GGG-T....TTTTTTT--HHHHHHT----S-.....-S- CS
  tRNA-synt_1e  75 laekfieefkkdleaLnvlkptleprvsekvdeiielvekliekgyaYavsdgdvyfdvskke....eYgklskqnleelelgaegevs.....eek 162
                   ++++++e+f++d++aLnvl+p++ +rv+e v++i+ +v+++i+kg+aY+++ g vyfd +++e    +Y+kl +++ ++  l++e e++      +k
    KHJ33270.1 240 VTKYWEEQFMTDMDALNVLRPDFITRVTEFVPQIVSFVDQIIKKGFAYETD-GSVYFDITAFEkagnRYAKLRPESRNDKALQEEAEGTlsknlGGK 335
                   *************************************************99.9****98776422227****998888777777666666688889* PP

                   SSTT-EEEEEE--TTS--B--TTSSEEE-SSHHHHHHHHHHH-SSEEEEEEEGGGTTTHHHHHHHHHHHHS...S...S--EEEEEEE--EEETTBE CS
  tRNA-synt_1e 163 kdkkDfaLWkaskegepswdsPwgkGRPGWhieCsvmaskllgseidihsGGiDLafPhhenelaqseaaf...d...kqlvkyflhnghlkiegek 253
                   +++ DfaLWk+sk+gep w+sPw++GRPGWhieCsvmas +lgs++dihsGGiDLafPhh+nelaqsea+f   +   +++v+yflh ghl+i g k
    KHJ33270.1 336 RNTGDFALWKKSKAGEPVWPSPWSEGRPGWHIECSVMASYILGSQMDIHSGGIDLAFPHHDNELAQSEAYFcqnGqkpHNWVNYFLHMGHLSIAGSK 432
                   *********************************************************************98333222347***************** PP

                   --TTTT---BHHHHHT.TS-HHHHHHHHHSS-TTS-EEE- CS
  tRNA-synt_1e 254 msksLknfitikdvlk.kfdprqlRllllsahyrsqldfk 292
                   msksLknf ti+d+l+ +++pr +R+++l  ++++ ++ +
    KHJ33270.1 433 MSKSLKNFQTIRDALQnEYTPRRMRIVFLMGRWNDGVEIS 472
                   ***************836****************988876 PP

>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.7e-06    0.0075      12      86 ..      63     136 ..      56     142 .. 0.78
   2 ?   -1.7   0.0      0.21   9.3e+02     105     209 ..     278     319 ..     239     334 .. 0.54
   3 !   11.1   0.0   2.6e-05      0.12     313     358 ..     418     464 ..     405     496 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.7e-06
                   S---HHHHHHHHHHHHHHHHHHHT.T-EEEEEEEE---SHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHTT---S CS
  tRNA-synt_1g  12 gklHlGhllevisaDifaRykrlr.geevlfvcgtDehGtpielkAekegvtpeelvekvheeikelfkklnisfd 86 
                   ++ HlGh+++++s+Di+ R  r   g +v fv        +i lkA+++++   e  + ++e  +el k   i+f+
    KHJ33270.1  63 DHSHLGHARNYVSTDIIRRIMRDYfGFKVRFVMNITDVDDKIILKARRHKLLELEKLKPYTE--SELVKLAAIAFN 136
                   678******************9876*******998888899999999988766665555544..344445555555 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.21
                   HHHHHTT-EEEEEEEEEEETTTTEEE-GGG-EE........-TTS-EE-TTSSB-E................EEE.EEEEEE-GGGGHHHHHHHH.H CS
  tRNA-synt_1g 105 kklkekgliyekeieqlycpkderflpdryvegtCPkckseeargdqceecgkkleptelinpksaisgskpevketehlffklskfekklkewiee 201
                    ++ +kg+ ye++ +                                                                ++f++ +fek+ +++ + 
    KHJ33270.1 278 DQIIKKGFAYETDGS----------------------------------------------------------------VYFDITAFEKAGNRYAKL 310
                   445555555555555................................................................555555555555555532 PP

                   H-TT.SHHH CS
  tRNA-synt_1g 202 eeke.leen 209
                   + ++   + 
    KHJ33270.1 311 RPESrNDKA 319
                   222222223 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 2.6e-05
                   S-EEEE--EEE--------------HHHHHHH.H-HHHHHHHHHHHS CS
  tRNA-synt_1g 313 kkvvaheyltvegkKlSkSrgvvvkakealer.ldadllRYylaaea 358
                   +     ++l + g+K+SkS +++ ++++al++ +++  +R ++++ +
    KHJ33270.1 418 NYFLHMGHLSIAGSKMSKSLKNFQTIRDALQNeYTPRRMRIVFLMGR 464
                   5566789**********************9999*******9888733 PP

>> DALR_2  DALR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   2.1e-06    0.0096       5      60 ..     528     584 ..     524     587 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 2.1e-06
                 HHTBT--HHHHHHHHHHHHHHHHH.HHHTT-HHHHHHHHHHHHHHHGGGT-S-S-HH CS
      DALR_2   5 aMdDDFNTaeAiavlFelakeiNr.alkeedkaaasalkallrelaevLGllqeepe 60 
                 +++D F T+ A+  + el++e+N     +++  + +al+a  r + ++ G++  +++
  KHJ33270.1 528 SLEDSFDTPRAMRIISELIREANIyISSQNQLLDIQALEASARWITKIIGIFGLDAN 584
                 68999*******************644444445556666666666777776665554 PP

>> tRNA-synt_1f  tRNA synthetases class I (K)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.1   7.3e-05      0.33      29      72 ..      57     101 ..      48     112 .. 0.89
   2 !    3.7   0.0    0.0054        24     278     327 ..     429     479 ..     387     507 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 7.3e-05
  tRNA-synt_1f  29 sGispSGliHiGnlrevltadlvaralrkr.geevrlilisDdmD 72 
                    G ++  + H+G +r+ +++d+++r +r+  g +vr+++ + d+D
    KHJ33270.1  57 CGPTVYDHSHLGHARNYVSTDIIRRIMRDYfGFKVRFVMNITDVD 101
                   566666789*******************99899**********99 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0054
  tRNA-synt_1f 278 ggekmssSkGnvltledwlev.aepevlrflilrrkPkkakkldldleilr 327
                    g+kms+S  n+ t++d+l+  ++p  +r ++l  + +  ++++ d++i++
    KHJ33270.1 429 AGSKMSKSLKNFQTIRDALQNeYTPRRMRIVFLMGRWNDGVEISADMKIMA 479
                   345**************9974378889999999999999999999987764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (822 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1032  (0.0575604); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.41
# Mc/sec: 5989.77
//
Query:       KHJ33271.1  [L=360]
Description: putative giy-yig catalytic domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.5e-13   49.0   0.0    1.5e-12   47.6   0.0    1.7  1  GIY-YIG         GIY-YIG catalytic domain
    5.5e-06   26.5   4.3    1.7e-05   24.9   4.3    1.8  1  FANCL_C         FANCL C-terminal domain
    0.00029   21.0   1.6     0.0007   19.8   1.6    1.7  1  zf-HC5HC2H      PHD-like zinc-binding domain
     0.0011   19.3   2.2     0.0039   17.5   0.5    2.4  2  zf-RING-like    RING-like domain
     0.0017   18.6   5.9     0.0017   18.6   5.9    2.1  2  zf-RING_2       Ring finger domain
      0.002   18.0   1.0     0.0037   17.1   1.0    1.4  1  PHD_Oberon      PHD - plant homeodomain finger protein
     0.0052   16.6   0.2      0.096   12.5   0.0    2.7  2  GAGA            GAGA factor
     0.0062   16.7   1.3      0.012   15.7   1.3    1.5  1  zf-HC5HC2H_2    PHD-zinc-finger like domain
  ------ inclusion threshold ------
      0.012   15.7   2.4      0.012   15.7   2.4    2.5  2  DNA_ligase_ZBD  NAD-dependent DNA ligase C4 zinc finger domai
      0.029   14.0   3.0      0.092   12.4   3.0    1.9  1  Zn_ribbon_17    Zinc-ribbon, C4HC2 type
      0.033   13.9   0.4       0.29   10.9   0.0    2.5  2  YdjO            Cold-inducible protein YdjO
       0.35   11.2   3.6        1.2    9.5   3.6    1.9  1  zf-rbx1         RING-H2 zinc finger domain
       0.36   10.7   4.0       0.26   11.2   1.2    2.1  2  zf-C3HC4_5      Zinc finger, C3HC4 type (RING finger)
       0.37   10.7   5.4       0.85    9.6   5.4    1.7  1  PHD             PHD-finger
        1.4    8.5   4.9        9.7    5.8   2.1    3.1  2  TF_Zn_Ribbon    TFIIB zinc-binding


Domain annotation for each model (and alignments):
>> GIY-YIG  GIY-YIG catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6   0.0   1.2e-15   1.5e-12       2      72 ..       9      83 ..       8      85 .. 0.93

  Alignments for each domain:
  == domain 1  score: 47.6 bits;  conditional E-value: 1.2e-15
                -EEEEEEET.TT--EEEEEESSHHHHHHHHHHHHHHT--S-H..S.STEEEE.EEEE----HHHHHHHHHHHHHH CS
     GIY-YIG  2 ggvYiirsk.enkliYvGstknlekRlkqHnagkkakytrkk..gkkpfeli.ileifptksealelEkklikky 72
                +++Y++rs+ + + +Y+Gst n+ +Rl qHn   k+++ r+   + +p+e++ ++ +f+++  al++E+++++ +
  KHJ33271.1  9 YCCYLLRSIpRPSSVYIGSTPNPTRRLEQHNGLIKGGAVRTSrtRLRPWEMTcVVSGFSSHIAALQFEWAWQNPH 83
                89*****99777778************************99999********9******************9976 PP

>> FANCL_C  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   4.3   1.4e-08   1.7e-05       2      63 ..     218     276 ..     217     280 .. 0.86

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 1.4e-08
                 --S-SSS--SS-TT-----B--S-TT----B-SGGGHHHHHHHHSSS-TTT--EEE-TTT-S CS
     FANCL_C   2 eveCgiCyayrldsgevpdisCdnekCnkkfHsaCLkeWlrslkesrqsfdvlfGeCPyCkk 63 
                 e  C+iC +    +++   ++C n+ Cn   H +CL  ++    e   s+  + GeCP C++
  KHJ33271.1 218 EGTCPICKSDLE-HNQGIYTVCPNPACNSVTHMTCLSKYFLD--EDDDSLLPVKGECPACHS 276
                 668****98766.8888899*******************965..5567888899******75 PP

>> zf-HC5HC2H  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   1.6   5.9e-07    0.0007      21      68 ..     203     254 ..     189     275 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 5.9e-07
  zf-HC5HC2H  21 meeiedvekikkerkklkCylCkkk....vGaciqCskkkCkkafHvtCake 68 
                   ++e+ ++i   +++ +C +Ck+     +G+   C ++ C++  H+tC  +
  KHJ33271.1 203 RPHVEKAKNIFDFEQEGTCPICKSDlehnQGIYTVCPNPACNSVTHMTCLSK 254
                 567889999999999********5555559*******************876 PP

>> zf-RING-like  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.85     1e+03      21      43 .]     202     224 ..     197     224 .. 0.81
   2 !   17.5   0.5   3.3e-06    0.0039      13      43 .]     237     274 ..     231     274 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.85
  zf-RING-like  21 vrlHvdCfqhyirthsskkCpkC 43 
                   +r Hv+ +++ +  +++ +Cp C
    KHJ33271.1 202 QRPHVEKAKNIFDFEQEGTCPIC 224
                   566888888889889999***99 PP

  == domain 2  score: 17.5 bits;  conditional E-value: 3.3e-06
  zf-RING-like  13 rCsnesCnvrlHvdCfqhyirthss.......kkCpkC 43 
                    C+n  Cn+  H  C+ +y+  + +        +Cp+C
    KHJ33271.1 237 VCPNPACNSVTHMTCLSKYFLDEDDdsllpvkGECPAC 274
                   6*******************776666777777778887 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.3       3.9   4.6e+03      23      37 ..     137     151 ..     129     153 .. 0.81
   2 !   18.6   5.9   1.5e-06    0.0017       2      43 ..     220     274 ..     219     275 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 3.9
   zf-RING_2  23 HvfhreClerwlrss 37 
                 H+f ++ +++w +++
  KHJ33271.1 137 HFFSKDVFDKWSKNC 151
                 889999999998766 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 1.5e-06
   zf-RING_2   2 eCpICleelssadsvl.llp...CgHvfhreClerw.lrssst........CPlC 43 
                 +CpIC ++l+ ++ +  ++p   C+ v h +Cl+++ l +           CP+C
  KHJ33271.1 220 TCPICKSDLEHNQGIYtVCPnpaCNSVTHMTCLSKYfLDEDDDsllpvkgeCPAC 274
                 7********98888552333446**9*********8455555599999999**** PP

>> PHD_Oberon  PHD - plant homeodomain finger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   1.0   3.1e-06    0.0037      25     123 ..     214     302 ..     199     308 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 3.1e-06
  PHD_Oberon  25 gFCkeCsCviCskfddekdtsswikCeevvseediCghvcHldCalreekagtvkkggsikldvefyCraCdkksellglvkkvlevakearsvdelvk 123
                 +F +e +C iC+  d e++   +  C      +  C  v+H++C l+++     +++  + l v+  C aC++++  + +vk++    ++++++++l k
  KHJ33271.1 214 DFEQEGTCPICK-SDLEHNQGIYTVC-----PNPACNSVTHMTC-LSKYFL---DEDDDSLLPVKGECPACHSVTRWIDVVKELSLRLRSSKDIENLLK 302
                 5778889****5.6999*********.....6799*********.444433...3456778888999****************9999999999998875 PP

>> GAGA  GAGA factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.0     8e-05     0.096       7      31 ..     201     225 ..     196     230 .. 0.87
   2 ?    0.7   0.0      0.39   4.7e+02      27      35 ..     271     279 ..     266     290 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 8e-05
                 S-SS-----CCCCTTS--EE-TTT- CS
        GAGA   7 krkdgllkiksksqsEqPAtCPiCq 31 
                 ++++ ++k k+    Eq  tCPiC+
  KHJ33271.1 201 NQRPHVEKAKNIFDFEQEGTCPICK 225
                 56788999****************8 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.39
                 -TTT--EES CS
        GAGA  27 CPiCqAviR 35 
                 CP C+ v R
  KHJ33271.1 271 CPACHSVTR 279
                 *******98 PP

>> zf-HC5HC2H_2  PHD-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   1.3     1e-05     0.012      40      87 ..     202     254 ..     189     276 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1e-05
  zf-HC5HC2H_2  40 erepvd.vekikkerlkekCllCkkr....kGaciqCskkeCktafHvtCala 87 
                   +r +v+  ++i + + + +C +Ck+     +G+   C +  C+++ H+tC ++
    KHJ33271.1 202 QRPHVEkAKNIFDFEQEGTCPICKSDlehnQGIYTVCPNPACNSVTHMTCLSK 254
                   444555578888888999******988999********************876 PP

>> DNA_ligase_ZBD  NAD-dependent DNA ligase C4 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.7   2.4   9.7e-06     0.012       1      25 [.     220     243 ..     220     244 .. 0.96
   2 ?    3.9   0.8     0.046        55       1       7 [.     270     276 ..     270     279 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 9.7e-06
  DNA_ligase_ZBD   1 hCPvCGsavvReegeaiyRCtnlsC 25 
                     +CP+C s +++++ +  + C+n+ C
      KHJ33271.1 220 TCPICKSDLEHNQ-GIYTVCPNPAC 243
                     7************.9********** PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.046
  DNA_ligase_ZBD   1 hCPvCGs 7  
                     +CP+C+s
      KHJ33271.1 270 ECPACHS 276
                     5*****9 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   3.0   7.7e-05     0.092       6      46 ..     220     272 ..     215     277 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.7e-05
  Zn_ribbon_17   6 sCayCelav...kgrvvlcg..vCeHvlHasCarewfendd.......laeCp 46 
                   +C +C+  +   +g +++c+  +C+ v+H  C+++ f  +d       ++eCp
    KHJ33271.1 220 TCPICKSDLehnQGIYTVCPnpACNSVTHMTCLSKYFLDEDddsllpvKGECP 272
                   79999887733357789996336*************65444356655556666 PP

>> YdjO  Cold-inducible protein YdjO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00024      0.29      34      52 ..     213     231 ..     210     237 .. 0.88
   2 ?   -0.4   0.1      0.82   9.8e+02      41      47 ..     270     276 ..     265     280 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00024
        YdjO  34 FsfeeePtCplCkseMvke 52 
                 F fe+e tCp+Cks+++++
  KHJ33271.1 213 FDFEQEGTCPICKSDLEHN 231
                 99************98765 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.82
        YdjO  41 tCplCks 47 
                  Cp C+s
  KHJ33271.1 270 ECPACHS 276
                 7****98 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   3.6     0.001       1.2      11      54 ..     218     274 ..     211     275 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.001
     zf-rbx1  11 eeacieckapgdee......cpvvlGeCgHaFHlhCiskWlkt.........rkvCPlc 54 
                 e++c+ ck++ +++      cp    +C+ + H+ C+sk++           + +CP c
  KHJ33271.1 218 EGTCPICKSDLEHNqgiytvCPNP--ACNSVTHMTCLSKYFLDedddsllpvKGECPAC 274
                 678999999988888887555554..5************9877799999999999**99 PP

>> zf-C3HC4_5  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.2   0.00022      0.26       2      39 ..     219     257 ..     218     265 .. 0.84
   2 ?   -1.3   0.1       1.8   2.1e+03       3       9 ..     270     276 ..     268     282 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00022
  zf-C3HC4_5   2 eiCPvCkssrYlnpdlefli.npeCYhkmCesCvdRlFs 39 
                  +CP+Cks+   n+ +  +  np+C      +C  + F 
  KHJ33271.1 219 GTCPICKSDLEHNQGIYTVCpNPACNSVTHMTCLSKYFL 257
                 58*************977655****98888888888775 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.8
  zf-C3HC4_5   3 iCPvCks 9  
                  CP C+s
  KHJ33271.1 270 ECPACHS 276
                 5999998 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   5.4   0.00071      0.85       2      49 ..     221     274 ..     220     277 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00071
                 BTTTTS.TTSTTSCEEEET..TTSCEEETTTSSSTHSHHSHHSS...TBSSTTT CS
         PHD   2 CavCkk.ksdeeeelvqCd..gCkrwfHqkClkppleseekpeg...ewlCekC 49 
                 C +Ck+  +++++   +C    C++  H++Cl+    +e++++    +  C+ C
  KHJ33271.1 221 CPICKSdLEHNQGIYTVCPnpACNSVTHMTCLSKYFLDEDDDSLlpvKGECPAC 274
                 ******7666688888896336**********8766544444335556666666 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   2.1    0.0081       9.7       2      24 ..     220     240 ..     219     247 .. 0.81
   2 ?    1.8   0.0      0.14   1.7e+02       3      10 ..     271     278 ..     269     284 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0081
                   EETTTTCEECHEETSTTCE.EESS CS
  TF_Zn_Ribbon   2 kCPnCgstnlveDpergel.vCtd 24 
                   +CP+C+s+   +++++g + vC++
    KHJ33271.1 220 TCPICKSD---LEHNQGIYtVCPN 240
                   7******7...5666777769985 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.14
                   ETTTTCEE CS
  TF_Zn_Ribbon   3 CPnCgstn 10 
                   CP C+s +
    KHJ33271.1 271 CPACHSVT 278
                   *****964 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       764  (0.0426125); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2680.50
//
Query:       KHJ33272.1  [L=400]
Description: putative atp-dependent rna helicase fal1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.1e-42  144.3   0.2    5.4e-42  143.5   0.2    1.3  1  DEAD           DEAD/DEAH box helicase
    2.6e-33  114.7   0.1    6.6e-33  113.4   0.0    1.7  2  Helicase_C     Helicase conserved C-terminal domain
    0.00032   20.5   0.1    0.00048   19.9   0.1    1.3  1  AAA_30         AAA domain
     0.0025   18.2   0.1      0.023   15.0   0.1    2.1  2  AAA_19         AAA domain
     0.0027   17.7   0.0     0.0051   16.8   0.0    1.5  1  ResIII         Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.046   13.1   0.0      0.093   12.1   0.0    1.4  1  TniB           Bacterial TniB protein
      0.052   13.4   0.0      0.087   12.7   0.0    1.4  1  Helicase_RecD  Helicase
      0.054   13.5   0.1       0.21   11.6   0.0    2.1  2  Flavi_DEAD     Flavivirus DEAD domain
       0.22   11.8   0.9       0.95    9.7   0.9    1.9  1  AAA_22         AAA domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.5   0.2   2.7e-45   5.4e-42       2     173 ..      51     213 ..      50     216 .. 0.94

  Alignments for each domain:
  == domain 1  score: 143.5 bits;  conditional E-value: 2.7e-45
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdi 100
                 ++Q++ai +i +g+d +++a+ G+GKT+ f+i +lq + + +  ++++al+++PtreLa q+ + +  +++y++++++++igg++  ++++kld g +i
  KHJ33272.1  51 AVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVI-D-TAIRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHI 147
                 69*********************************999.4.466777**************************************************** PP

                 EEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 101 vvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdv 173
                 v gtpgr++d++++++l+++q+++lVlDEad+ll+ gf+++i  + + lp          qv+v+SATlp dv
  KHJ33272.1 148 VSGTPGRVADMIRRRNLRTRQIKMLVLDEADELLNRGFREQIYDVYRYLP-------PATQVVVVSATLPYDV 213
                 *************************************************4.......4557*********666 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       5.5   1.1e+04      14      30 ..      92     108 ..      83     132 .. 0.66
   2 !  113.4   0.0   3.3e-36   6.6e-33       2     111 .]     252     360 ..     251     360 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 5.5
                 TTTSEEEEEESSHHHHH CS
  Helicase_C  14 eeggkilifvntidrle 30 
                  ++ ++l+ ++t++ + 
  KHJ33272.1  92 IRETQALVLSPTRELAT 108
                 46778888888888443 PP

  == domain 2  score: 113.4 bits;  conditional E-value: 3.3e-36
                 HHHHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHH CS
  Helicase_C   2 kleallellkleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvts 99 
                 k+++l++l+  +    +++if+nt+++++  ++ ++e  +++v  +hge+pq+er+ i+++f++g+s+vLi+tdv +rGid+++v+lVin+dlp n ++
  KHJ33272.1 252 KFDTLCDLY-DTLTITQAVIFCNTRRKVDWlTDKMREA-NFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNREN 348
                 677888887.788999************7666666433.6*********************************************************** PP

                 HHHHHTTSSSTT CS
  Helicase_C 100 yiqriGRtgRag 111
                 yi+riGR gR+g
  KHJ33272.1 349 YIHRIGRSGRFG 360
                 **********86 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.1   2.4e-07   0.00048       4      98 ..      51     178 ..      48     205 .. 0.65

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 2.4e-07
      AAA_30   4 aeQaaavealltsgdrvavltGpAGtGKttalkal..reaweaa.ggrviglAptgkaAkvLa....................eelgieastiakllkr 79 
                 a Q++a+ ++++++d  +++++  GtGKt + +    + + +a  + + ++l+pt + A +++                    +               
  KHJ33272.1  51 AVQSRAIVQICKGRD--TIAQAQSGTGKTATFSISmlQVIDTAIrETQALVLSPTRELATQIQsvvmalgdymnvqchaciggT--------------- 132
                 67************9..9**********9765443304444444568899************9444333333333222222220............... PP

      AAA_30  80 lk............................grarlepg.tllivDEag 98 
                  +                            +  r + + ++l+ DEa 
  KHJ33272.1 133 -NvgedirkldygqhivsgtpgrvadmirrRNLRTR-QiKMLVLDEAD 178
                 .12333333334444666777777777754323333.45999999985 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   1.1e-05     0.023       2      68 ..      54     120 ..      53     205 .. 0.66
   2 ?    0.8   0.0      0.29   5.8e+02      42      78 ..     265     299 ..     250     381 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.1e-05
      AAA_19   2 reave.alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgae 68 
                  +a+   +k +  +  a  GtGKT +    +  ++++  +   + l++++t+  a +++  + alg  
  KHJ33272.1  54 SRAIVqICKGRDTIAQAQSGTGKTATFSISMLQVIDTAIR-ETQALVLSPTRELATQIQSVVMALGDY 120
                 5566438888999999*************99999999955.59***************9988555443 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.29
      AAA_19  42 peeillvaftgrAakelrerlaalgaeatTiHrlall 78 
                   + ++ + t+r ++ l++++++++   + +H+   +
  KHJ33272.1 265 ITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGE--M 299
                 578899999************9999888888865..3 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   2.6e-06    0.0051      25     147 ..      64     183 ..      48     211 .. 0.56

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 2.6e-06
                 SEEEEEESTTSTHHHHH.HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG........GEEEESSS-B--.......-SEEEEEHHHHHHTH CS
      ResIII  25 krglikmaTGtGKTlva.aklierllkkgkeekflflvprkslleqtleefkkflseayke....igkkvsgdkkkakekdstnkkilvttiqsldads 118
                 +  + ++  GtGKT +  +++ + + ++ +e ++l+l p+++l  q ++ ++ + +  + +    ig+   g+  ++     +  + +v+ +    ad+
  KHJ33272.1  64 RDTIAQAQSGTGKTATFsISMLQVIDTAIRETQALVLSPTRELATQIQSVVMALGDYMNVQchacIGGTNVGEDIRK----LDYGQHIVSGTPGRVADM 158
                 457889999*******9555555566666666***************966555444333223323333222222222....344444444444444444 PP

                 ........HHHTTT-SEEEEETGGGTTS. CS
      ResIII 119 eeeeeeseellrdrfdviiiDEaHrlgak 147
                       +  l+  ++++++ DEa  l   
  KHJ33272.1 159 ----IRRRNLRTRQIKMLVLDEADELLNR 183
                 ....1445555555667777777777764 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.7e-05     0.093     113     158 ..     162     205 ..     148     209 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4.7e-05
        TniB 113 rllrelkvrvLiiDEihnllagsarkqreflnalksLgnelkipiv 158
                 r lr+ ++++L++DE ++ll+  +  ++++  + ++L    ++ +v
  KHJ33272.1 162 RNLRTRQIKMLVLDEADELLN--RGFREQIYDVYRYLPPATQVVVV 205
                 679*****************5..55556677777777766666665 PP

>> Helicase_RecD  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   4.4e-05     0.087       3      99 ..      69     177 ..      67     208 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4.4e-05
  Helicase_RecD   3 tAdRGRGKSaalGlalaaliaegk..snilvtapskenvktlfeflakglealglke...........eekkkkaekaelrvr.kqrieyiapdel 84 
                    +A+ G+GK+a+  + + ++i ++   ++ lv +p++e ++++ + + +  + ++++              +k +  ++ ++   ++  + i+ ++l
     KHJ33272.1  69 QAQSGTGKTATFSISMLQVIDTAIreTQALVLSPTRELATQIQSVVMALGDYMNVQChaciggtnvgeDIRKLDYGQHIVSGTpGRVADMIRRRNL 164
                    6999****************9987789**********99999999977777776666778877666542222222223333334555555555555 PP

  Helicase_RecD  85 lklkeqadllvvDEA 99 
                     ++  q ++lv DEA
     KHJ33272.1 165 RTR--QIKMLVLDEA 177
                    553..5788999998 PP

>> Flavi_DEAD  Flavivirus DEAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0    0.0001      0.21       2      53 ..      61     114 ..      60     143 .. 0.76
   2 ?   -2.1   0.0       1.6   3.3e+03      42     106 ..     225     290 ..     200     296 .. 0.53

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.0001
                 XX--EEEEE--TTS-TTTTH...HHHHHHHHHHTT--EEEEESSHHHHHHHHHHT CS
  Flavi_DEAD   2 rkkkltvldlhPGaGktrkv...lpelvkeaierrlrtlvLaPtrvvlaemeeal 53 
                 +k++ t+ ++  G+Gkt  +   + +++++ai r+ ++lvL+Ptr  ++ ++  +
  KHJ33272.1  61 CKGRDTIAQAQSGTGKTATFsisMLQVIDTAI-RETQALVLSPTRELATQIQSVV 114
                 5788899999*******987222344455555.67899*******9998887654 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.6
                 SHHHHHHHHHHTTTS-EEE-------------SEEEEEHHHHHHHHHH..T------SEEEEETTT- CS
  Flavi_DEAD  42 trvvlaemeealkglevryktsavkeektgrelvdvmchatftkrlls..pvrkknyeliimDeahf 106
                  r+ ++  e  l+gl+  +   + kee + + l d+    t+t+ ++     rk+++    m ea f
  KHJ33272.1 225 VRILVKRDELTLEGLKQYFI-AVEKEEWKFDTLCDLYDTLTITQAVIFcnTRRKVDWLTDKMREANF 290
                 44444444444444443222.2222333444555555555666655542234445555555556555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.9   0.00048      0.95      13     108 ..      71     188 ..      66     208 .. 0.55

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00048
      AAA_22  13 esGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka....................erlsseell.ealeqalrara 90 
                 +sGtGKT +    + q  ++ +++e ++ v++ t    t  +++  +l   ++++++a                               ++++ +r+r 
  KHJ33272.1  71 QSGTGKTATFSISMLQV-IDTAIRETQALVLSPTRELATQIQSVVMALGDYMNVQCHAciggtnvgedirkldygqhiV-----SGTpGRVADMIRRRN 163
                 67777777776666664.3333333444444444444445555555555555555555777777777777777444442.....333334444444444 PP

      AAA_22  91 v....ielliiDEaqhlrs...eea 108
                      i++l++DEa+ l +    e+
  KHJ33272.1 164 LrtrqIKMLVLDEADELLNrgfREQ 188
                 444446**********643133333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2772.01
//
Query:       KHJ33273.1  [L=547]
Description: putative trna (adenine-n -)-methyltransferase catalytic subunit trm61 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-57  193.1   3.3    1.2e-21   77.6   0.0    4.7  4  GCD14     tRNA methyltransferase complex GCD14 subunit


Domain annotation for each model (and alignments):
>> GCD14  tRNA methyltransferase complex GCD14 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.6   0.0   6.6e-26   1.2e-21       1      62 [.     139     200 ..     139     205 .. 0.98
   2 !   36.3   0.0   2.6e-13   4.7e-09      65     111 ..     222     268 ..     206     283 .. 0.89
   3 !   16.4   0.0   3.2e-07    0.0057     113     132 ..     305     324 ..     292     330 .. 0.89
   4 !   59.5   0.3   2.2e-20   3.9e-16     140     246 ..     360     513 ..     339     514 .. 0.83

  Alignments for each domain:
  == domain 1  score: 77.6 bits;  conditional E-value: 6.6e-26
       GCD14   1 gfvyvlaptPeLWtlaLphrtqilytaDisliimkLelkpGsvvvesGtGsgslshaiartv 62 
                 gfv++l ptPe Wt +Lphrtq++yt+D s i ++L+ +pGs+ +e+G+Gsgs++ha ar+v
  KHJ33273.1 139 GFVHILPPTPENWTSSLPHRTQVVYTPDYSYILHRLRARPGSRLIEAGAGSGSFTHASARAV 200
                 8***********************************************************98 PP

  == domain 2  score: 36.3 bits;  conditional E-value: 2.6e-13
       GCD14  65 tGhlftfefheqraekareefrehelsqlvtvthrDvckeGfdeevs 111
                  G+++++efheqr+ek ++e ++h+l+++v +  rDvc+eGf  +v+
  KHJ33273.1 222 FGKVWSYEFHEQRYEKLQKEIEDHGLESIVEIVSRDVCTEGFLINVQ 268
                 59****************************************66664 PP

  == domain 3  score: 16.4 bits;  conditional E-value: 3.2e-07
       GCD14 113 kvDavfLDlPaPweaiphaa 132
                  + avfLDlPaPw a+ph++
  KHJ33273.1 305 LASAVFLDLPAPWLALPHLT 324
                 578***************87 PP

  == domain 4  score: 59.5 bits;  conditional E-value: 2.2e-20
       GCD14 140 grlCsfsPCieqvqrtceaLrelgfteietlevllrtyevrkskleeidlaekrleenerkriekakrrka..skdakvedkssks...stevllkPv. 232
                   +C+fsPCieqvqrt+  +r lg+++ie +e+ ++++e+r++++  +  +++r +++   ++e+a  r    +k +k+++++++    s+++++k   
  KHJ33273.1 360 VHICTFSPCIEQVQRTVSSMRRLGWVDIEIVELSQKRHEIRRERIGLSIKGAQRGQQVTPVNVEEAVARLLevEKTTKAYQERGTNaisSDKLVAKGEp 458
                 579******************************************999999888888877777766555443356666666666545667777777667 PP

       GCD14 233 .........................................selkghtgyLtfat 246
                                                           e+k+ht+yL+fa+
  KHJ33273.1 459 ddeipieskhykenpsrrenfiknlvenksykdgrlvhrteAEVKTHTSYLVFAV 513
                 7888899999999999999999999999999******99999************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (547 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       423  (0.0235931); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3826.57
//
Query:       KHJ33274.1  [L=500]
Description: putative splicing factor 3a subunit 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.2e-77  257.8   0.7    1.1e-76  256.7   0.1    1.8  2  DUF3449          Domain of unknown function (DUF3449)
    4.4e-27   94.4   0.6    4.4e-27   94.4   0.6    1.9  2  SF3A3            Pre-mRNA-splicing factor SF3A3, of SF3a comp
    3.6e-13   49.1   0.1    7.5e-13   48.1   0.1    1.6  1  SF3a60_bindingd  Splicing factor SF3a60 binding domain
    9.8e-08   32.1   2.6    2.2e-05   24.7   0.6    2.5  2  zf-met           Zinc-finger of C2H2 type
    4.9e-07   29.9  10.8    1.2e-06   28.7   1.5    2.9  3  zf-C2H2_jaz      Zinc-finger double-stranded RNA-binding
    3.6e-05   23.8   8.1      0.058   13.4   0.7    3.5  3  PRP9_N           Pre-mRNA-splicing factor PRP9 N-terminus
     0.0016   18.8   1.8      0.085   13.2   0.2    2.8  3  zf-C2H2_2        C2H2 type zinc-finger (2 copies)
  ------ inclusion threshold ------
       0.11   12.4   0.1        0.3   11.0   0.1    1.7  1  zf-LYAR          LYAR-type C2HC zinc finger
       0.12   13.3   1.1         27    6.0   0.1    2.7  2  zf-C2H2_4        C2H2-type zinc finger
       0.12   12.3   0.0       0.33   10.9   0.0    1.7  1  DUF951           Bacterial protein of unknown function (DUF95
       0.33   10.6   1.3       0.73    9.5   1.3    1.5  1  Desulfoferrod_N  Desulfoferrodoxin, N-terminal domain
        0.7   10.5   2.5         15    6.3   0.1    2.7  2  zf-C2H2          Zinc finger, C2H2 type


Domain annotation for each model (and alignments):
>> DUF3449  Domain of unknown function (DUF3449)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       1.6   2.4e+03      71     117 ..     224     274 ..     214     285 .. 0.67
   2 !  256.7   0.1   7.4e-80   1.1e-76       2     184 .]     313     499 ..     312     499 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.6
                 XXXXXXXXXXXXXXX..XXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXX CS
     DUF3449  71 wdgkPipyWLykLhg..LgkeykCeiCgn..avYkGrkaFekHFseerHae 117
                 w+++ ip W   +     g +++   C++  +++k  ++++ H   ++H++
  KHJ33274.1 224 WENNDIPGWKLEVPApsKGGNFSSKWCADceKEFKNENVYKAHLPGKKHIK 274
                 566666666555443113345666667642257888899999999999986 PP

  == domain 2  score: 256.7 bits;  conditional E-value: 7.4e-80
                 HHHHHHHHHHTHHHHHHHHHHHHHHHT--HHHHHHH.............HH--SS--B-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3449   2 elkikklaellskeieetkenverkqaltaeereee.eeeeeeek....keeeedeeeeeeeekiynplnlplgwdgkPipyWLykLhgLgkeykCeiC 95 
                 e+++k+la ++s+e+++++ nverkq++t++er+ e ++  ++++    + +++++ e++++++iynpl+lpl+wdgkPip+WLykLhgLg+e++CeiC
  KHJ33274.1 313 EYRTKRLAAAMSQERSDSRVNVERKQGMTERERQMElDALFADNApttvH-NRDSDGESDTDDRIYNPLKLPLAWDGKPIPFWLYKLHGLGVEFRCEIC 410
                 99**********************************63333333344322.3334444688899*********************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3449  96 gnavYkGrkaFekHFseerHaeglkcLgientklfkeitkiedaleLweklkkekkkekakeeeeveveDeeGnvmskkvYedLkkqgl 184
                 gn+vY+Gr+aF+kHF+e+rH++glkcLgi+nt+lf+eit i+da++Lw+k++++k k+k +e + v++eD++Gnvm++kvY dL+kqgl
  KHJ33274.1 411 GNYVYMGRRAFDKHFNETRHIYGLKCLGITNTTLFREITDIADAVKLWDKIQRDKIKNKKDEGSIVQMEDADGNVMPEKVYYDLQKQGL 499
                 ****************************************************************************************8 PP

>> SF3A3  Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       5.1   7.6e+03      10      25 ..      86     101 ..      80     110 .. 0.66
   2 !   94.4   0.6   2.9e-30   4.4e-27       1      79 []     127     210 ..     127     210 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 5.1
       SF3A3  10 kylDLnelyeeylnlk 25 
                 +  ++++++++y n +
  KHJ33274.1  86 QLGEIKSFHQRYPNEP 101
                 4556677888887755 PP

  == domain 2  score: 94.4 bits;  conditional E-value: 2.9e-30
       SF3A3   1 lFsgeEqyGkylDLnelyeeylnlkeik.ldYlqYLesfdkf....seipkkqkkskeYkeYlkeLleYLesfikrtqpLedld 79 
                 +F+geE++Gk+lDL++++e ylnl++ik l+YlqYL+ fd+f     +i++++k++++Y +Y+ eL++YLe+f++rt+pLedld
  KHJ33274.1 127 MFTGEESFGKFLDLTTIHEMYLNLPGIKrLSYLQYLDAFDTFtppqMSIKRHDKTTDQYFTYVGELVKYLEDFMRRTRPLEDLD 210
                 7*************************977*************99988899*******************************986 PP

>> SF3a60_bindingd  Splicing factor SF3a60 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.1   0.1     5e-16   7.5e-13       1      27 []      73      99 ..      73      99 .. 0.99

  Alignments for each domain:
  == domain 1  score: 48.1 bits;  conditional E-value: 5e-16
  SF3a60_bindingd  1 sisggDpFseFYkrLkeIKdyHrkYPN 27
                     sis+g+p++eFY++L+eIK +H++YPN
       KHJ33274.1 73 SISTGEPLEEFYRQLGEIKSFHQRYPN 99
                     8*************************9 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.6   1.5e-08   2.2e-05       2      25 .]     249     272 ..     248     272 .. 0.98
   2 !    7.1   0.1    0.0051       7.6       1      21 [.     405     426 ..     405     426 .. 0.94

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 1.5e-08
      zf-met   2 yCelCnvtfnsesqlksHlqGKkH 25 
                 +C  C + f++e+++k+Hl GKkH
  KHJ33274.1 249 WCADCEKEFKNENVYKAHLPGKKH 272
                 9*********************** PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0051
      zf-met   1 fyCelC.nvtfnsesqlksHlq 21 
                 f Ce+C n ++ ++ +++ H++
  KHJ33274.1 405 FRCEICgNYVYMGRRAFDKHFN 426
                 79******************87 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   1.5   7.7e-10   1.2e-06       3      26 ..     249     272 ..     247     273 .. 0.95
   2 ?   -2.4   0.3       4.4   6.5e+03       9      15 ..     282     288 ..     281     288 .. 0.86
   3 !    7.2   0.1    0.0043       6.4       2      26 ..     405     430 ..     404     431 .. 0.92

  Alignments for each domain:
  == domain 1  score: 28.7 bits;  conditional E-value: 7.7e-10
                  BBTTTTBBBSSHHHHHCCTTSHHH CS
  zf-C2H2_jaz   3 YCvlCdKyFksenaldnHlkSKkH 26 
                  +C  C+K Fk+en++++Hl +KkH
   KHJ33274.1 249 WCADCEKEFKNENVYKAHLPGKKH 272
                  6999******************** PP

  == domain 2  score: -2.4 bits;  conditional E-value: 4.4
                  BBBSSHH CS
  zf-C2H2_jaz   9 KyFksen 15 
                  + Fk+en
   KHJ33274.1 282 RNFKNEN 288
                  89***98 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0043
                  CBBTTTT.BBBSSHHHHHCCTTSHHH CS
  zf-C2H2_jaz   2 fYCvlCd.KyFksenaldnHlkSKkH 26 
                  f C++C    +   +a+d+H++  +H
   KHJ33274.1 405 FRCEICGnYVYMGRRAFDKHFNETRH 430
                  8999999999999**********999 PP

>> PRP9_N  Pre-mRNA-splicing factor PRP9 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   1.2   0.00013       0.2       2      29 ..       3      30 ..       2      38 .. 0.92
   2 !   13.4   0.7   3.9e-05     0.058      69     127 ..      33      96 ..      28     116 .. 0.78
   3 ?    0.6   0.0      0.34     5e+02      61      97 ..     175     211 ..     172     225 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00013
      PRP9_N  2 lleerrslleeleviEdaIssRlqRnPe 29
                +lee+r + e+le +E++Is+R+  +P 
  KHJ33274.1  3 ILEEQRFIHEDLERLEQGISDRVAEEPR 30
                79*********************99885 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 3.9e-05
      PRP9_N  69 kqillQqhEinlFledykkklksleklkeeadseelkdke.....kslekfkelleeikekekd 127
                 +  l  +h i+ Fl++++++ k+l ++ ++ad  + k+ +     + le+f ++l eik+ ++ 
  KHJ33274.1  33 RERLNRDHQISSFLDRIQSQSKRLLEIYKDADGARSKEIQsistgEPLEEFYRQLGEIKSFHQR 96 
                 5566779********************8877766666655999999************987665 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.34
      PRP9_N  61 skkskrsrkqillQqhEinlFledykkklksleklke 97 
                  k++ ++  q  +   E+ ++led++++ + le+l +
  KHJ33274.1 175 IKRHDKTTDQYFTYVGELVKYLEDFMRRTRPLEDLDR 211
                 6888999999999999************999998864 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       8.3   1.2e+04      30      46 ..     183     199 ..     177     203 .. 0.74
   2 !   13.2   0.2   5.7e-05     0.085      52      81 ..     249     278 ..     243     287 .. 0.84
   3 ?    3.7   0.0      0.05        75      47      76 ..     401     431 ..     394     437 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 8.3
   zf-C2H2_2  30 reylvdleglleylrek 46 
                 ++y++++ +l++yl++ 
  KHJ33274.1 183 DQYFTYVGELVKYLEDF 199
                 57788888899988765 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 5.7e-05
   zf-C2H2_2  52 eClyCekefkslealreHmkkkgHckinee 81 
                  C  Cekefk+ + +++H+  k+H k ++ 
  KHJ33274.1 249 WCADCEKEFKNENVYKAHLPGKKHIKAAQA 278
                 6************************98653 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.05
   zf-C2H2_2  47 ieekleClyCeke.fkslealreHmkkkgHc 76 
                 +  +++C +C++     ++a+ +H ++ +H 
  KHJ33274.1 401 LGVEFRCEICGNYvYMGRRAFDKHFNETRHI 431
                 55679*****999788**************6 PP

>> zf-LYAR  LYAR-type C2HC zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1    0.0002       0.3       3      18 ..     250     266 ..     249     267 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0002
     zf-LYAR   3 CiDCsktFdg.deykaH 18 
                 C DC k+F++ + ykaH
  KHJ33274.1 250 CADCEKEFKNeNVYKAH 266
                 9*********8889999 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.1      0.03        45       2      20 ..     249     267 ..     248     268 .. 0.91
   2 ?    6.0   0.1     0.018        27       1      20 [.     405     425 ..     405     427 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.03
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHl 20 
                 +C  C k F++ + ++ Hl
  KHJ33274.1 249 WCADCEKEFKNENVYKAHL 267
                 699*******999999996 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.018
   zf-C2H2_4   1 fkCpiC.gksFsskkaLlrHl 20 
                 f+C+iC + ++  ++a+ +H+
  KHJ33274.1 405 FRCEICgNYVYMGRRAFDKHF 425
                 89****999999999999997 PP

>> DUF951  Bacterial protein of unknown function (DUF951)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00022      0.33      26      52 ..     400     426 ..     395     428 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00022
      DUF951  26 GadiklkClgcgrevmlpRskfekkik 52 
                 G  + ++C+ cg+ v + R+ f+k+++
  KHJ33274.1 400 GLGVEFRCEICGNYVYMGRRAFDKHFN 426
                 5667789*****************976 PP

>> Desulfoferrod_N  Desulfoferrodoxin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   1.3   0.00049      0.73       7      16 ..     405     414 ..     402     416 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00049
                      EE-TTT--EE CS
  Desulfoferrod_N   7 YkCevCGniV 16 
                      ++Ce+CGn V
       KHJ33274.1 405 FRCEICGNYV 414
                      8*******98 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.1      0.01        15       3      20 ..     250     267 ..     250     267 .. 0.92
   2 ?    3.4   0.3     0.082   1.2e+02       1      17 [.     405     422 ..     405     431 .. 0.60

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.01
                 ETTTTEEESSHHHHHHHH CS
     zf-C2H2   3 CpdCgksFkrksnLkrHi 20 
                 C dC k Fk+   +k+H+
  KHJ33274.1 250 CADCEKEFKNENVYKAHL 267
                 99********99999995 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.082
                 EEETTTT.EEESSHHHHH CS
     zf-C2H2   1 ykCpdCg.ksFkrksnLk 17 
                 ++C++Cg +++  +  + 
  KHJ33274.1 405 FRCEICGnYVYMGRRAFD 422
                 89*****84444333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       869  (0.048469); expected 358.6 (0.02)
Passed bias filter:                      574  (0.0320152); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3460.17
//
Query:       KHJ33275.1  [L=104]
Description: hypothetical protein EV44_g3296 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.076   13.3   1.0        0.4   11.0   0.3    2.2  3  HTH_Tnp_Tc3_2  Transposase


Domain annotation for each model (and alignments):
>> HTH_Tnp_Tc3_2  Transposase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0     0.021   3.8e+02       4      29 ..       9      35 ..       6      37 .. 0.82
   2 ?   11.0   0.3   2.2e-05       0.4      54      71 ..      35      52 ..      30      53 .. 0.90
   3 ?   -3.0   0.0      0.49   8.8e+03      50      56 ..      78      84 ..      75      91 .. 0.72

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.021
  HTH_Tnp_Tc3_2  4 IvrlvrkdPritlreLanelkee.Gks 29
                     rl+r   ++++ e+a+e++++ G+s
     KHJ33275.1  9 AHRLIRTGKFKSAPEVAKEFSKVeGTS 35
                   56889999999*********9998876 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 2.2e-05
  HTH_Tnp_Tc3_2 54 lLskknrkaRLeFAkehl 71
                    L++ +r+ RL++A++hl
     KHJ33275.1 35 SLKPWHRAVRLKWAQQHL 52
                   68999************8 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 0.49
  HTH_Tnp_Tc3_2 50 rkkplLs 56
                   rkkp L 
     KHJ33275.1 78 RKKPDLN 84
                   7777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 814.50
//
Query:       KHJ33276.1  [L=313]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
        8.3    7.2   7.9       0.66   10.7   0.4    2.9  3  Synthase_beta  ATP synthase F1 beta subunit


Domain annotation for each model (and alignments):
>> Synthase_beta  ATP synthase F1 beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.3      0.26   4.6e+03      46      49 .]      28      31 ..       6      47 .. 0.54
   2 ?   10.7   0.4   3.7e-05      0.66      22      42 ..     179     199 ..     172     201 .. 0.89
   3 ?   -1.2   0.1       0.2   3.5e+03      11      21 ..     213     223 ..     209     241 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.26
  Synthase_beta 46 LLnR 49
                    LnR
     KHJ33276.1 28 TLNR 31
                   3332 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 3.7e-05
  Synthase_beta  22 sslsssaprlpspssarraSP 42 
                    s +sss+p+++ ps a++aS 
     KHJ33276.1 179 SNISSSNPKVSKPSWAEKASA 199
                    679****************96 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.2
  Synthase_beta  11 LRSSsrRsaak 21 
                    +R S  R+++k
     KHJ33276.1 213 IRASPPRGQSK 223
                    57777788777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       520  (0.0290033); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2241.22
//
Query:       KHJ33277.1  [L=205]
Description: hypothetical protein EV44_g1322 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.053   12.0   0.5      0.091   11.2   0.0    1.5  2  ABC_export  Putative ABC exporter


Domain annotation for each model (and alignments):
>> ABC_export  Putative ABC exporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   5.1e-06     0.091     294     337 ..      33      77 ..      19      85 .. 0.79
   2 ?   -2.1   0.4     0.052   9.4e+02     281     304 ..      89     112 ..      87     125 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.1e-06
  ABC_export 294 keGkvses.kkkkkkvkkvkgikrgkGAkaifyKqlleykrsskf 337
                  ++  +++ kkkkkk++++  i+ ++G  +i yK +l ++r +  
  KHJ33277.1  33 DSDLSEAIdKKKKKKIRQLNEINGREGLGPIDYKDMLAQIRVNLS 77 
                 5554554569******************************98765 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.052
  ABC_export 281 esaedkeemikavkeGkvseskkk 304
                 ++a ++++ ++++k Gk + ++ k
  KHJ33277.1  89 AKAFKYYSTRRNQKRGKRQPQSNK 112
                 68999999********99975332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       934  (0.0520944); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1588.59
//
Query:       KHJ33278.1  [L=1856]
Description: putative transcriptional corepressor of histone genes [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.019   15.0   0.3      0.094   12.8   0.3    2.2  1  VPR              VPR/VPX protein
      0.077   13.2   0.6        2.3    8.4   0.0    3.1  3  TPR_9            Tetratricopeptide repeat
      0.091   13.2   0.3         21    5.8   0.0    3.6  3  TPR_17           Tetratricopeptide repeat
       0.34   10.6   6.8      0.068   12.9   2.2    2.3  2  TPR_11           TPR repeat
       0.51   10.6   5.1    1.3e+02    3.1   0.8    5.0  4  TPR_2            Tetratricopeptide repeat
        4.3    7.7   6.0         73    3.7   0.1    3.7  4  Phage_T7_Capsid  Phage T7 capsid assembly protein


Domain annotation for each model (and alignments):
>> VPR  VPR/VPX protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3   3.2e-05     0.094      14      54 ..    1449    1489 ..    1441    1526 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.2e-05
         VPR   14 qrEpfdeWleetleeikeeAvkHfprelliavwnyiyeetg 54  
                   +E ++ ++ e ++++++e ++H++ +++ +v    ye+ +
  KHJ33278.1 1449 YEEEWSSYIIEQVRQLRKEDKQHWQHRMISRVASLLYENDE 1489
                  6899******************************9999864 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.81   2.4e+03      11      42 ..      30      61 ..      27      63 .. 0.87
   2 ?    8.4   0.0   0.00078       2.3      23      66 ..     157     200 ..     146     203 .. 0.85
   3 ?    0.5   0.0      0.23   6.8e+02       7      38 ..    1186    1217 ..    1186    1218 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.81
       TPR_9 11 weralavverllllaPddpeerrdRGlllaql 42
                 e al+ ++  l l+++ p+ +   + ++++l
  KHJ33278.1 30 IEDALKLYQVALKLHSQGPDQYENAAKAYQEL 61
                67899999999999999999999999999886 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00078
       TPR_9  23 llaPddpeerrdRGlllaqlGclsaAladLeaylalapdapdae 66 
                 + +  d +++r  +++ a lG  +  + +Lea+l++++d+  ae
  KHJ33278.1 157 VSDESDTDLWRRIARVSAMLGSKRISRYCLEAALEVDDDPTVAE 200
                 55778999*****************************8877765 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.23
       TPR_9    7 reedweralavverllllaPddpeerrdRGll 38  
                  +++d  +a  +  + l+ ++d++e ++  +l+
  KHJ33278.1 1186 QSDDIRVASNYMRLHLQCNSDHWETWYHLALC 1217
                  57889999999999*************99986 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.4   4.2e+03      12      30 ..     429     447 ..     427     449 .. 0.87
   2 ?    2.8   0.0     0.063   1.9e+02       6      23 ..    1201    1218 ..    1201    1236 .. 0.91
   3 ?    5.8   0.0    0.0069        21       1      23 [.    1332    1354 ..    1332    1357 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.4
      TPR_17  12 nadaynnLAelllknGdlm 30 
                 n+d+ +++Ae l+k  +++
  KHJ33278.1 429 NVDSATQYAEQLEKFAQSD 447
                 99********999888876 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.063
      TPR_17    6 leldPnnadaynnLAell 23  
                  l+++ ++++ ++ LA ++
  KHJ33278.1 1201 LQCNSDHWETWYHLALCF 1218
                  78*************986 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0069
      TPR_17    1 lylkaleldPnnadaynnLAell 23  
                  l++ +l+  P+n+  +++LA++l
  KHJ33278.1 1332 LFRASLRERPDNWINHYMLAKCL 1354
                  688999**************987 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   2.2   2.3e-05     0.068       9      40 ..      29      60 ..      29      61 .. 0.96
   2 ?   -2.9   0.2       1.9   5.8e+03      14      24 ..     469     479 ..     469     480 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.3e-05
      TPR_11  9 kyeeAieaYkkAlkldPdnaeayynLGlayyk 40
                ++e+A++ Y+ Alkl ++ ++ y n ++ay++
  KHJ33278.1 29 QIEDALKLYQVALKLHSQGPDQYENAAKAYQE 60
                78****************************97 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.9
      TPR_11  14 ieaYkkAlkld 24 
                 i+++++Al+l+
  KHJ33278.1 469 IKELQEALALK 479
                 8999****997 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1     0.079   2.4e+02      17      30 ..      30      43 ..      29      46 .. 0.88
   2 ?    3.1   0.8     0.044   1.3e+02      16      29 ..      50      63 ..      49      65 .. 0.91
   3 ?    2.3   0.0     0.075   2.2e+02       2      32 ..     164     194 ..     163     196 .. 0.92
   4 ?   -0.8   0.0      0.74   2.2e+03      20      34 .]    1329    1343 ..    1326    1343 .. 0.90

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.079
       TPR_2 17 yeeAleafekAlel 30
                 e+Al++++ Al+l
  KHJ33278.1 30 IEDALKLYQVALKL 43
                699**********9 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.044
       TPR_2 16 dyeeAleafekAle 29
                +ye A++a+++ l+
  KHJ33278.1 50 QYENAAKAYQELLK 63
                8**********997 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.075
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldP 32 
                 +++ +++++ + lg     + ++e+Ale d 
  KHJ33278.1 164 DLWRRIARVSAMLGSKRISRYCLEAALEVDD 194
                 5799************************886 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 0.74
       TPR_2   20 AleafekAleldPnn 34  
                  A+++f+++l+  P+n
  KHJ33278.1 1329 AAKLFRASLRERPDN 1343
                  99***********97 PP

>> Phage_T7_Capsid  Phage T7 capsid assembly protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1     0.025        73      28      70 ..      55      97 ..      48     102 .. 0.83
   2 ?    1.7   0.0       0.1   3.1e+02      25      82 ..     419     472 ..     415     493 .. 0.70
   3 ?    2.6   0.0     0.055   1.7e+02      12      73 ..     836     897 ..     829     911 .. 0.89
   4 ?   -3.9   0.4       5.6   1.7e+04      69     112 ..    1701    1743 ..    1696    1750 .. 0.65

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.025
  Phage_T7_Capsid 28 qealveqyvesvveyaGGrekfqailshleaenkdaaesleaa 70
                      +a  e    +v +y   + +fq++++h e e  daa +le a
       KHJ33278.1 55 AKAYQELLKSEVFRYPESESEFQRVYNHPEFEYVDAAIALELA 97
                     556666667899*************************999977 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.1
  Phage_T7_Capsid  25 irGqealveqyvesvveyaGGrekfqailshleaenkdaaesleaalerrDlatvkai 82 
                      ir ++ l+++ v+s  +ya   ekf++  + +     d + s+ + l  +Dl t+k +
       KHJ33278.1 419 IRNRDTLADENVDSATQYAEQLEKFAQSDEVV----FDFVGSILKKLDIHDLGTIKEL 472
                      66777888888888888888888887665554....4555555556666666666654 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.055
  Phage_T7_Capsid  12 eaaGyskafvdsyirGqealveqyvesvveyaGGrekfqailshleaenkdaaesleaaler 73 
                        +Gys +    ++r  e +ve    s    +  + + +++l+ l+a ++ +++sl  al++
       KHJ33278.1 836 LSIGYSTQVFSCHLRSIEVIVEDLRSSNYTESAEDSRQHKLLNWLKALDDLLVKSLTMALNE 897
                      579*********************999888888888999******************99975 PP

  == domain 4  score: -3.9 bits;  conditional E-value: 5.6
  Phage_T7_Capsid   69 aalerrDlatvkaiinlageslakkfGkkpkrsvtkrakPakpk 112 
                       a +++   + v  +  + ++ + kk+G+  +r+v +ra  a ++
       KHJ33278.1 1701 ATINSSKTQNVVGVATVPTKERPKKIGVS-RREVLRRAESAVNR 1743
                       55555555666666667778888999985.78999999875443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1856 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       610  (0.0340231); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.91u 0.26s 00:00:01.17 Elapsed: 00:00:00.41
# Mc/sec: 13431.92
//
Query:       KHJ33279.1  [L=546]
Description: putative purine-cytosine permease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.6e-27   94.4  30.9    1.1e-26   93.6  30.9    1.3  1  Transp_cyt_pur  Permease for cytosine/purines, uracil, thiami
  ------ inclusion threshold ------
      0.014   14.9   0.4      0.094   12.2   0.3    2.3  2  4HB_MCP_1       Four helix bundle sensory module for signal t


Domain annotation for each model (and alignments):
>> Transp_cyt_pur  Permease for cytosine/purines, uracil, thiamine, allantoin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.6  30.9   1.3e-30   1.1e-26      10     378 ..      93     466 ..      84     514 .. 0.85

  Alignments for each domain:
  == domain 1  score: 93.6 bits;  conditional E-value: 1.3e-30
  Transp_cyt_pur  10 ktlnlfsiWlganlnintwvigalglalgLnwwqsvlviivgnligaifvallglaGakyGlpfpilsRasfGirgsllplllrvviaivwfgvq 104
                     +++n+f +W +   ++ ++ +g lg+ +gL + q++++ii+g+++g +  a+ g  G+k+Gl+  +++R+sfG +g+ + +l+ +v+  ++ +v+
      KHJ33279.1  93 SVFNMFLMWWSLTCHVGALPMGMLGPDFGLTFRQCLAAIIIGAFLGSACSASCGTLGPKLGLRAIATARYSFGFYGAKVCSLINIVTGAGYATVN 187
                     789******************************************************************************************** PP

  Transp_cyt_pur 105 awiGsealllmlgkifgkwleiggailgtsltelvtffifwvvslvivllgvskirkffviaallvpvaafgfliwalvkaegGpvldkavklgk 199
                     a+++++ l+++ ++  +    ig +il+  l  ++++f+f v++ +++++++ ++ ++  +  ++   + +    +  + +++G+ l+       
      KHJ33279.1 188 AVVVGQLLSSVTEQKLS--PSIG-CILIGVLSYVISIFGFKVIHSYVKYAWIGSFIVLCILLGQICSKVDISRKATQTGLPHVGAFLS------- 272
                     ************98877..7999.******************************9999999999988888888888888888877777....... PP

  Transp_cyt_pur 200 selflsavagvlagfatlilnapDFtryaktkkssvkiqlvavpllftlllligilvaaaakaayganawspldilakfdet............. 281
                        fl   +   ++ at+ + a+D+  + +  + + ki ++ +++ + +++++ i++a ++ +a++++   ++++   + ++             
      KHJ33279.1 273 ---FL---TINFSSSATWGTVAADYFCNYPANTPKWKIYFLMIFGIVLPTSFTAIVGACLGNIAFNVTSETGSNLTSYAYPVfaeayhdhglggi 361
                     ...33...344455555555556********************************************99999988888888899999999***** PP

  Transp_cyt_pur 282 ........agvllililvalaqlgvnisanllsagldlaallPkkinikrgsliaavialvivpwkllsssskl..ftaflsllavflspvagvi 366
                             + + +il l+ ++ l+ ni    +s gl ++ l         + ++  +ia++i+++  ++ ++ +  + +f+s+l++   +++ ++
      KHJ33279.1 362 lrvsyypdVLSRIILTLLSFSVLANNIVV-NYSVGLSFQLLGD-CFHAVPRFIWSLLIAILITVLAVIGRENLSniVANFVSMLGYWAISFTLIL 454
                     ****9987777777777777666655555.5899999998877.555556788999999999999999999888889999999999999999999 PP

  Transp_cyt_pur 367 iadyfvvrrgyl 378
                     +++  v rr+  
      KHJ33279.1 455 GIEDGVFRRRSG 466
                     986655555543 PP

>> 4HB_MCP_1  Four helix bundle sensory module for signal transduction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.3   1.1e-05     0.094      13      60 ..     415     462 ..     411     467 .. 0.88
   2 ?   -1.1   0.0      0.13   1.1e+03       2      32 ..     472     502 ..     471     503 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.1e-05
   4HB_MCP_1  13 lllallliivGvvGlyslkkinknletmYedrllpikdlgeikanlre 60 
                 ll+a+l+++++v+G  +l++i +n+ +m   + ++ + +  i++ + +
  KHJ33279.1 415 LLIAILITVLAVIGRENLSNIVANFVSMLGYWAISFTLILGIEDGVFR 462
                 799******************************999999888876665 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.13
   4HB_MCP_1   2 lkirkKLillflllallliivGvvGlyslkk 32 
                 +++ +KL  +++++a+ll+   + Gl+++++
  KHJ33279.1 472 WNVPSKLPWGIAAMAALLVSYLAGGLTGMSQ 502
                 57889**************999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       639  (0.0356406); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.38
# Mc/sec: 4333.98
//
Query:       KHJ33280.1  [L=172]
Description: putative microsomal signal peptidase 18 kda subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.9e-07   30.4   0.0    4.1e-07   29.9   0.0    1.3  1  Peptidase_S24  Peptidase S24-like


Domain annotation for each model (and alignments):
>> Peptidase_S24  Peptidase S24-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0   2.3e-11   4.1e-07       2      49 ..      45      95 ..      44     123 .. 0.85

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 2.3e-11
                   XXSSTTCCTXXTTXEEEEECTS...---TTSEEEEEETTCE-EEEEEEEEE CS
  Peptidase_S24  2 vpGdSMeptlldGdlilVdkfs...epkrGdivvfrlpgeeeayiKrvigl 49
                   v ++SMep ++ Gdl++    +   e k G+ivv  ++g+++ +++r++++
     KHJ33280.1 45 VLSGSMEPAFQRGDLLFLWNRNfleETKVGEIVVYSVKGKDIPIVHRLVRK 95
                   88****************9777899***********************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1299.45
//
Query:       KHJ33281.1  [L=131]
Description: hypothetical protein EV44_g3258 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       564  (0.0314574); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.19s 00:00:00.58 Elapsed: 00:00:00.36
# Mc/sec: 1082.57
//
Query:       KHJ33282.1  [L=353]
Description: putative guanine nucleotide-binding protein alpha subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   4.3e-122  407.7   4.9   5.1e-122  407.4   4.9    1.0  1  G-alpha       G-protein alpha subunit
    3.9e-15   55.7   2.3    2.6e-10   40.0   0.1    2.5  2  Arf           ADP-ribosylation factor family
     0.0007   19.4   0.1      0.003   17.4   0.0    2.0  2  zf-CHC2       CHC2 zinc finger
      0.002   17.5   4.2      0.056   12.8   0.1    2.8  2  Gtr1_RagA     Gtr1/RagA G protein conserved region
  ------ inclusion threshold ------
      0.012   15.8   1.3        1.2    9.4   0.1    2.8  2  Roc           Ras of Complex, Roc, domain of DAPkinase
      0.019   14.7   0.0      0.045   13.5   0.0    1.7  1  AAA_29        P-loop containing region of AAA domain
      0.087   12.0   0.1       0.14   11.3   0.1    1.3  1  NB-ARC        NB-ARC domain
      0.094   12.2   0.0        1.2    8.7   0.0    2.3  2  GTP_EFTU      Elongation factor Tu GTP binding domain
      0.095   11.8   0.1       0.19   10.8   0.1    1.5  1  MCM           MCM P-loop domain
       0.11   12.6   0.1        7.5    6.7   0.0    2.5  2  MMR_HSR1      50S ribosome-binding GTPase
       0.14   11.5   0.0       0.31   10.4   0.0    1.5  1  FtsK_SpoIIIE  FtsK/SpoIIIE family


Domain annotation for each model (and alignments):
>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  407.4   4.9  3.1e-125  5.1e-122       2     354 .]      14     342 ..      13     342 .. 0.98

  Alignments for each domain:
  == domain 1  score: 407.4 bits;  conditional E-value: 3.1e-125
                 XXXXXXXXXXXXXXXXXXE..EEEEEEEESTTSSHHHHHHHHHHHCS----HHHHHCCHHHHHHHHHHHHHHHHHHHHHTT.......HHHC-SS-SCC CS
     G-alpha   2 rtssaidkslkaerkarkkkrevkllllGqseSGKsTilkqlkllykkgfseeelatwraviqlnivrsiktilealesleselsesfelqelkerldp 100
                  ++++i+++lk+++  +++  e+k+lllG++eSGKsTilkq+kl++++g+s++e+++++++i++n+v+s++ ilea+esle +l     +q+ + +++ 
  KHJ33282.1  14 ARNEEIENQLKKDKLMQRN--EIKMLLLGAGESGKSTILKQMKLIHEGGYSRDERESFKEIIFSNTVQSMRVILEAMESLELPL----YDQKAEYHVQT 106
                 6899***********9999..**********************************************************99999....9********** PP

                 CS-HCHHHH..........HHCCHHC-HCHHHHHHHHCCSHHHHHHHCCGCCTT--TTHHHHHCTHHHHCSTT----CHHHHCS-----SEEEEEEECT CS
     G-alpha 101 lkkveasliaklssateeeqeiefnpraevgedikaLwndpgiqelyerrnkiklednaeyFlddleritspdYlptddDilkarlktvGisetkfevd 199
                 ++   a++           + ++++p   vg++i aLw+d g+q +++r+++++l+d+a+y++d+++rit+ dY+p+d+D+l++r+kt+Gi+et+f ++
  KHJ33282.1 107 IFMQPAQI-----------EGDNLPP--AVGNAIAALWQDAGVQDCFKRSREYQLNDSARYYFDNIDRITQADYMPNDQDVLRSRVKTTGITETTFIIG 192
                 **999998...........99*****..**********************************************************************9 PP

                 -TEEEEEEEE-SSHHHHHGTCCCTTTECEEEEEEEGGGTT-B-SS-TTSBHHHHHHHHHHCCCC-GGGTTSEEEEEEE-HHHHHHHCCCS-GGGCCTT- CS
     G-alpha 200 sklefrivdvgGqrserkkWvpffddvdaiiFlvslsefdqvlyedekvnrleeslklFkeicnnkllkntpiiLflnKlDileeKlkkgklskyfpsy 298
                  +l++r++dvgGqrserkkW+++f++v++i+Flv++se+dq+l+ede+vnr++e+l+lF++icn++++ +t+iiLflnK+D ++eKl  +++++yfp++
  KHJ33282.1 193 -DLTYRMFDVGGQRSERKKWIHCFENVTTILFLVAISEYDQLLFEDETVNRMQEALTLFDSICNSRWFIKTSIILFLNKIDRFKEKLPVSPMKNYFPDF 290
                 .************************************************************************************************** PP

                 -H.CCHHHHHHHHHHHHHHCCCCCCESGGSCEEEEEE-TT-HHHHHHHHHHHHHHH CS
     G-alpha 299 egrkndlesvlkylrnkFeeihkeksnnrrkiythftsatdtkevqkviesvrdti 354
                 eg ++d+  +++y+ n+F++++     ++++iythft+atdt +++ v+++v+d+i
  KHJ33282.1 291 EG-GEDYTLACEYILNRFVSLNH---HETKQIYTHFTCATDTSQIRFVMSAVNDII 342
                 *9.******************65...66779**********************997 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.3   8.9e-06     0.014       7      35 ..      27      54 ..      20      59 .. 0.84
   2 !   40.0   0.1   1.6e-13   2.6e-10      40     128 ..     176     274 ..     167     285 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 8.9e-06
                GGTT.TTEEEEEEEESTTSSHHHHHHHHH CS
         Arf  7 klklkkkelrilllGLDnaGKtTilkklk 35
                kl++ ++e+++lllG  ++GK+Tilk++k
  KHJ33282.1 27 KLMQ-RNEIKMLLLGAGESGKSTILKQMK 54
                4444.88*******************997 PP

  == domain 2  score: 40.0 bits;  conditional E-value: 1.6e-13
                 EECSSSSSEEEEEEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CT..........THHHHHHHHHHHCTSGCCTTSEEEEEEE-TTST CS
         Arf  40 vttvPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadre..........RleeakeeLkalleeeelkevallvlaNKqDlp 128
                  + v T+g +  +  i +l+++++DvGGq++ R+ W + fe++++++f+v  ++ +          R++ea + ++++ +++   +  ++++ NK+D  
  KHJ33282.1 176 RSRVKTTGITETTFIIGDLTYRMFDVGGQRSERKKWIHCFENVTTILFLVAISEYDqllfedetvnRMQEALTLFDSICNSRWFIKTSIILFLNKIDRF 274
                 45678999999***************************************87654323333344459******************************75 PP

>> zf-CHC2  CHC2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.3   2.1e+03      50      79 ..     207     236 ..     204     249 .. 0.61
   2 !   17.4   0.0   1.8e-06     0.003      27      73 ..     291     337 ..     268     348 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.3
     zf-CHC2  50 pekqfyyCfgCgagGdaikFlmeieklsfv 79 
                 ++k+  +Cf   ++   +  ++e+++l f+
  KHJ33282.1 207 ERKKWIHCFENVTTILFLVAISEYDQLLFE 236
                 678888888655544444445556666665 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 1.8e-06
     zf-CHC2  27 kkgkdyvalCPFHeektpsftvspekqfyyCfgCgagGdaikFlmei 73 
                   g+dy+  C +  ++  s++ +++kq+y  f+C +  + i+F+m+ 
  KHJ33282.1 291 EGGEDYTLACEYILNRFVSLNHHETKQIYTHFTCATDTSQIRFVMSA 337
                 5799****************************************975 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   1.2     0.012        19       1      17 [.      35      51 ..      35      97 .. 0.86
   2 !   12.8   0.1   3.4e-05     0.056      21     127 ..     165     277 ..     157     293 .. 0.69

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.012
   Gtr1_RagA  1 kvLLmGksgsGKtsmrs 17
                k+LL+G ++sGK+++ +
  KHJ33282.1 35 KMLLLGAGESGKSTILK 51
                89***********9964 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 3.4e-05
   Gtr1_RagA  21 dnylardtlrlga...tidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDve.........sreleedletlkeilealrq 107
                 + y+++d   l +   t+ ++++++ + g lt  ++D+gGq++  ++       + f+nv  +++++ ++         +    + +++  ++++ + +
  KHJ33282.1 165 ADYMPNDQDVLRSrvkTTGITETTF-IIGDLTYRMFDVGGQRSERKKW-----IHCFENVTTILFLVAISeydqllfedE--TVNRMQEALTLFDSICN 255
                 6677777766664112556666666.89*************9987775.....799*************96766666431..33333333333334433 PP

   Gtr1_RagA 108 ys..peakvfvlihKmDliqed 127
                      + ++  +++K+D  +e+
  KHJ33282.1 256 SRwfIKTSIILFLNKIDRFKEK 277
                 33114567888999*9999876 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   0.00073       1.2       1      20 [.      35      54 ..      35     114 .. 0.65
   2 ?    4.7   0.1     0.021        34      28     119 ..     171     272 ..     158     273 .. 0.55

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00073
                EEEEESSTTSSHHHHHHCHC CS
         Roc  1 KvvlvGdsgvGKtsllkrfv 20
                K++l+G +++GK+++lk++ 
  KHJ33282.1 35 KMLLLGAGESGKSTILKQMK 54
                89**************9863 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.021
                 EETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTT.T-HHHHCTSCEEEEE....EE.....GHHHHCHHHHHHHHHHHCS.....SS-E CS
         Roc  28 ekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrs.lhplylreaalailv....yd.....srssenlkeWlkelkkvag.....kspv 111
                  +  +   ++t+ +t+     ++  + +++++++D++Gq   r+   +++ +   +++lv    yd     +++ ++++e l+ +++ ++     k+ +
  KHJ33282.1 171 DQDVLRSRVKTTGITE-----TTFIIGDLTYRMFDVGGQRSERKkWIHCFENVTTILFLVaiseYDqllfeDETVNRMQEALTLFDSICNsrwfiKTSI 264
                 5555555554444432.....23345678999*******887763778888877777776333333444433344555655555555555222223456 PP

                 EEEEE-TT CS
         Roc 112 ilvgnkiD 119
                 il  nkiD
  KHJ33282.1 265 ILFLNKID 272
                 66677776 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   2.8e-05     0.045      20      39 ..      30      50 ..      21      67 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.8e-05
      AAA_29 20 dlkg.atlltGpsGsGKSTll 39
                ++++  +ll G+ +sGKST+l
  KHJ33282.1 30 QRNEiKMLLLGAGESGKSTIL 50
                3455689*************9 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   8.8e-05      0.14       9      77 ..      25      92 ..      15     109 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 8.8e-05
                HHHHHCTTTSCSEEEEEEESTTSSHHHHHHHHC..CSHCCCCCCBTEEEEEEEESXXHHHHHHHXXHHHHH CS
      NB-ARC  9 iekLlekdelqslvvalvGmgGvGKttlakqil..nksdevegrFdsvawvvvsktdkseeiletilkeLs 77
                ++kL++ +e++   + l G g +GK+t++kq+   ++    + + +s+  +  s+t++s +++ + ++ L+
  KHJ33282.1 25 KDKLMQRNEIK---MLLLGAGESGKSTILKQMKliHEGGYSRDERESFKEIIFSNTVQSMRVILEAMESLE 92
                47899999999...99*************996411332333446667777777777777777666666665 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.11   1.8e+02       4      36 ..      34      66 ..      31     107 .. 0.69
   2 ?    8.7   0.0   0.00073       1.2     122     142 ..     261     281 ..     177     343 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.11
                EEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHH CS
    GTP_EFTU  4 rnigiighvDhGKtTLtdrLlyktgaiskkgek 36
                +++ ++g  ++GK+T++ ++   ++   ++ e+
  KHJ33282.1 34 IKMLLLGAGESGKSTILKQMKLIHEGGYSRDER 66
                6788899999******99875444443333344 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00073
                 TTEEEEEEESCGSTHHHHHHH CS
    GTP_EFTU 122 gvpiivfiNKmDrlkaelkei 142
                 ++ ii+f+NK+Dr k++l  +
  KHJ33282.1 261 KTSIILFLNKIDRFKEKLPVS 281
                 4569**********8887654 PP

>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   0.00012      0.19      48      86 ..      24      61 ..      17      82 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00012
                BSSSSBBCSS-EEEEEESSTSTHHHHHHHHHHHSSSEEE CS
         MCM 48 ledktklrgdinvllvgdpgtaKsqlLkyveklapravy 86
                ++dk   r +i++ll+g    +Ks++Lk+++ + +++ y
  KHJ33282.1 24 KKDKLMQRNEIKMLLLGAGESGKSTILKQMKLI-HEGGY 61
                5677889**********************9954.44444 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.045        74       2      19 ..      36      53 ..      35      85 .. 0.86
   2 ?    6.7   0.0    0.0046       7.5      32     113 ..     180     269 ..     159     270 .. 0.64

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.045
                EEEEESTTSSHHHHHHHH CS
    MMR_HSR1  2 vaivGrpNvGKStLinal 19
                ++++G   +GKSt+++++
  KHJ33282.1 36 MLLLGAGESGKSTILKQM 53
                5789999*******9987 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0046
                 SSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETTTTCSHH...HHHHHHHHHHH.............TTSEEEEEEE CS
    MMR_HSR1  32 tTrdinegrvklkgkeielvDtpGliegaseekglgkaflaleeadlillvvdaseeklkp...ldeeleellee.............akkplilvln 113
                 +T+ i+e ++ +++  +++ D+ G     se+k+  + f+   ++  il++v +s e +++   +de++++++e               k  +il ln
  KHJ33282.1 180 KTTGITETTFIIGDLTYRMFDVGG-QR--SERKKWIHCFE---NVTTILFLVAIS-E-YDQllfEDETVNRMQEAltlfdsicnsrwfIKTSIILFLN 269
                 6777777777778899********.33..34444455555...367899999888.4.4442225777777764455555555555554445555555 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00019      0.31      40      59 ..      34      53 ..      10      55 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00019
                  .SEEEE--TTSSHHHHHHHH CS
  FtsK_SpoIIIE 40 shllvaGatgsGKStalntL 59
                    +l++Ga +sGKSt l+ +
    KHJ33282.1 34 IKMLLLGAGESGKSTILKQM 53
                  4699*************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       794  (0.0442858); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 2615.09
//
Query:       KHJ33283.1  [L=175]
Description: putative effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0049   16.5   0.0     0.0063   16.2   0.0    1.2  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   3.5e-07    0.0063     194     237 ..       7      52 ..       1      57 [. 0.83

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 3.5e-07
       RVT_2 194 kdlgkvskfLGieiaq..eaggiklsladyiakvvkkfeltdaktv 237
                  +lg+++ fLG+ i++  ++ ++ l +++y ++v+ kf++ +ak  
  KHJ33283.1   7 TNLGEMKMFLGMRITRdrKNQTLWLDQQQYFERVLTKFGIPNAKHR 52 
                 479***********995456677889**************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 1453.87
//
Query:       KHJ33284.1  [L=852]
Description: putative duf221 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-76  257.7  25.3    1.2e-76  257.7  25.3    1.9  2  RSN1_7TM   Calcium-dependent channel, 7TM region, putative ph
    3.1e-38  131.0   1.3    3.1e-38  131.0   1.3    2.7  2  RSN1_TM    Late exocytosis, associated with Golgi transport
    7.4e-35  120.8   0.2    1.3e-34  120.0   0.2    1.4  1  PHM7_cyt   Cytosolic domain of 10TM putative phosphate transp
     0.0011   17.9   3.0     0.0011   17.9   3.0    2.6  3  Anoctamin  Calcium-activated chloride channel


Domain annotation for each model (and alignments):
>> RSN1_7TM  Calcium-dependent channel, 7TM region, putative phosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.34   1.5e+03     125     166 ..     363     404 ..     352     424 .. 0.81
   2 !  257.7  25.3   2.6e-80   1.2e-76       1     273 [.     431     706 ..     431     707 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.34
    RSN1_7TM 125 ptsipkllaeslpkasnFfityillqglagaaleLlqlvkli 166
                 +++i++   +++p+ s+ fit   ++ + +++ +Ll   +l 
  KHJ33284.1 363 DEKIIDARKNQYPSTSTAFITMESISVCQIIVQTLLDPLPLH 404
                 678899999999999999999988888888888888777765 PP

  == domain 2  score: 257.7 bits;  conditional E-value: 2.6e-80
    RSN1_7TM   1 rklivtlllvlliifwiipvafvgllsnletltkvlpflkkilelskkllsvvtgllPtlllslllallpiilrllsklqGalsrselelsvvskyfaF 99 
                 r++i+t+++++l+ifw++pva+++ l ++ +++++lp l+kil++++ l s+v++ lPtl++sll++++p+++ +ls+ qG++s++++els++sk+f+F
  KHJ33284.1 431 RAWIITIFITVLTIFWVVPVAALAGLLDICSIQRFLPKLAKILNSHDILKSLVQTGLPTLVVSLLNICVPFLYDFLSNQQGMISQGDVELSLISKNFFF 529
                 689************************************************************************************************ PP

    RSN1_7TM 100 lvvnvFlvftlagtalslleeiid...nptsipkllaeslpkasnFfityillqglagaaleLlqlvklilflikrkflsktprdlaerytkppsfdyg 195
                 +++nvFl ft+agta+++++++ d   ++t  + +la s+++++ Ff ++illqg+++++l+Ll+++++ l+ i+r + sk prd +e++ +pp f+yg
  KHJ33284.1 530 TFFNVFLTFTVAGTATKFWSTLQDslkDTTFLALKLAGSVQQVAVFFTNFILLQGVGFIPLRLLEFGSVSLYPIMR-MYSKSPRDHWELT-QPPVFKYG 626
                 ******************98888877799999*******************************************8.677********77.******** PP

    RSN1_7TM 196 teypkvllifvialiYsviaP..lilpfaliyfllgylvykyqllyvydtkyesgGklwpralnrllvglvlfqllligl 273
                  ++p  +l+ +++++Ys++    ++l f++iyf+ +y++ykyqlly+++++++++  +wp++++r+l+gl +fq++++g+
  KHJ33284.1 627 FYLPSAILVYILCIVYSILPAgyMVLFFGIIYFINSYYTYKYQLLYAMNHPQHATEGAWPMICYRILLGLCVFQIVMAGI 706
                 *******************9999*******************************************************97 PP

>> RSN1_TM  Late exocytosis, associated with Golgi transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.0   1.3     7e-42   3.1e-38       2     154 ..      25     200 ..      24     202 .. 0.80
   2 ?   -1.2   0.7      0.34   1.5e+03      87     105 ..     434     452 ..     425     465 .. 0.71

  Alignments for each domain:
  == domain 1  score: 131.0 bits;  conditional E-value: 7e-42
     RSN1_TM   2 lltslvinlvlalvflllFlilRkknkrvYaprtylkgeeertpplpqkglfgWipallkisdeeilekaGLDayvflrflkmlikiflvlavlalivL 100
                 ++++l+++l+l+l+ l+ F++lR+++k++Ya+r+  + + ++ p+lp ++++gWip l +++++++le+aGLDayvfl f+km+i++f++++++a++vL
  KHJ33284.1  25 IYVQLILSLALGLAGLFGFCFLRPRWKSLYAARKCRSIRASTLPELP-DSFLGWIPVLHSVTEDQVLETAGLDAYVFLAFFKMSIRLFSTIFFIAIAVL 122
                 899******************************99876777777777.*************************************************** PP

     RSN1_TM 101 lPvn.......................atggegedskesk..sgldklsisnvsegsnrlwahvvvayiftglvlylly 154
                  P+n                       +t +  ++++ s   s++     ++v  +  +lwa+++++y+ftgl++y+++
  KHJ33284.1 123 APINnhfdwlptpgdpqghrnlsetniFTYNYYQSESASItsSSVAITDNEDV-PDPTYLWAYLIFTYVFTGLAIYFMT 200
                 ****8888887776666666655555522222222222112233344444444.4555******************987 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.34
     RSN1_TM  87 kiflvlavlalivLlPvna 105
                  i ++++vl+++ ++Pv a
  KHJ33284.1 434 IITIFITVLTIFWVVPVAA 452
                 4666777777778888876 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.0   0.2   2.8e-38   1.3e-34       2     176 .]     223     420 ..     222     420 .. 0.92

  Alignments for each domain:
  == domain 1  score: 120.0 bits;  conditional E-value: 2.8e-38
    PHM7_cyt   2 rTvlvtgiPkelrseeklkeffeelypgkvvesvqivrdvkkldklveerekavrkleaalskykkngkklpkkr........................ 76 
                 rT+ ++g+P++lrse k+ke +e++ +gkv esv+i+r++k ld+l ++r++++rklea+++ y+ ++++ +++                         
  KHJ33284.1 223 RTFKLSGVPSKLRSESKIKEVIENFGIGKV-ESVSIARNWKYLDRLLDQRTRLLRKLEAVWTIYLNQKRHIENNSsenrtlylqngnqtpqaeeehlld 320
                 8999*************************8.*******************************9988877665555899********************* PP

    PHM7_cyt  77 ............pthklgflglkligkkvdaidyyrekleeldeeieeerekvkkkplgaaFvtfesersaaavakqakcaaqiqqssnptlkpkkwtv 163
                             p++k+ +  l+  +++vdaid+y+ekl++lde+i ++r++ ++  ++ aF+t+es++  + +         +q+ ++p   p ++ +
  KHJ33284.1 321 qgqnsielddcrPKKKVYLGILCWRSREVDAIDFYEEKLRSLDEKIIDARKN-QYPSTSTAFITMESISVCQII---------VQTLLDPL--PLHLLA 407
                 ************99999876666679************************95.6999*********99877766.........68889997..789*** PP

    PHM7_cyt 164 elAPePrDviWeN 176
                 +lAP+P D+iW+N
  KHJ33284.1 408 KLAPAPADIIWQN 420
                 ************9 PP

>> Anoctamin  Calcium-activated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.17   7.5e+02     243     305 ..     184     317 ..      90     332 .. 0.55
   2 !   17.9   3.0   2.5e-07    0.0011     108     221 ..     420     543 ..     411     586 .. 0.77
   3 ?   -3.2   2.7      0.63   2.8e+03     160     160 ..     684     684 ..     605     733 .. 0.49

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.17
   Anoctamin 243 egcleelkeqLaiilvtkqllnnilevllPyl...........keklkk.................................................. 280
                 +  ++ +++ Lai+++t q+ + i++v + yl           k                                                       
  KHJ33284.1 184 YLIFTYVFTGLAIYFMTSQT-KLIIKVRQRYLgchssvtyrtfK----Lsgvpsklrseskikevienfgigkvesvsiarnwkyldrlldqrtrllrk 277
                 44555666777777777776.46666666666555544433330....134444444444455555555555555555555555555555555555555 PP

   Anoctamin 281 ...............kkkesekdekeeeeskkltqaekey 305
                                ++++se+     ++ ++  qae+e+
  KHJ33284.1 278 leavwtiylnqkrhiENNSSENRTLYLQNGNQTPQAEEEH 317
                 5555555554333332224455555555555555555555 PP

  == domain 2  score: 17.9 bits;  conditional E-value: 2.5e-07
   Anoctamin 108 efyyppwkrrlfrllvslplvlllicl...avvgvlilrclalqelvssvke......lls.flptvlnlvlililnevykklaiwltdlEnhrtqsey 196
                 ++y p+++r ++ +++++ +++l i+    +     +l + ++q ++ ++ +      +l+ ++ t l  +++++ln  +  l  +l +      q ++
  KHJ33284.1 420 NTYLPRYNRIIRAWIITIFITVLTIFWvvpVAALAGLLDICSIQRFLPKLAKilnshdILKsLVQTGLPTLVVSLLNICVPFLYDFLSNQQGMISQGDV 518
                 56889***9999999999665544444223333344445566788888887765555533347777788****************************** PP

   Anoctamin 197 ekslilKvflfqfvnsylslfyiaF 221
                 e sli K f+f+f+n +l + + + 
  KHJ33284.1 519 ELSLISKNFFFTFFNVFLTFTVAGT 543
                 *****************98776554 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 0.63
   Anoctamin 160 f 160
                  
  KHJ33284.1 684 A 684
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (852 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       896  (0.0499749); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.68u 0.24s 00:00:00.92 Elapsed: 00:00:00.41
# Mc/sec: 6269.98
//
Query:       KHJ33285.1  [L=554]
Description: putative 4-coumarate- ligase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.3e-95  319.2   0.0    4.1e-95  318.9   0.0    1.1  1  AMP-binding    AMP-binding enzyme
    1.4e-14   54.8   0.0    2.9e-14   53.8   0.0    1.5  1  AMP-binding_C  AMP-binding enzyme C-terminal domain
  ------ inclusion threshold ------
      0.056   12.2   0.0      0.085   11.6   0.0    1.2  1  Herpes_ORF11   Herpesvirus dUTPase protein


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  318.9   0.0   6.8e-99   4.1e-95       1     422 [.      22     443 ..      22     444 .. 0.88

  Alignments for each domain:
  == domain 1  score: 318.9 bits;  conditional E-value: 6.8e-99
                  HHHHHHHST.TSEEEEECCSTEEEEHHHHHHHHHHHHHHHH.HTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTES CS
  AMP-binding   1 leeqaaktp.dkvalvdsgegqtlTYreldervnrlAagLr.slGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseak 96 
                  +e++ +++p +kv l+ds +++++T++++++ + ++++ ++   + k gd+ a+++pn+++   ++ ++l aG+v++p np++t +el ++l+ds+ak
   KHJ33285.1  22 FERRDREFPdQKVILIDSITNRSYTFGQVERTALEFGKNIKaIWNWKCGDVLAVYSPNCVDIPSIIWGTLWAGGVLSPSNPNYTLAELVFQLKDSGAK 119
                  78999999*88999999999*********************778****************************************************** PP

                  EEEETCTCCCHHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS......-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHH CS
  AMP-binding  97 vliatvdselleklleaaakleavklvivldadellkeeelkeeeeseekae......kpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanv 188
                  +l+  +++ +l+ +++a +++   ++ i+l  de  k ++++++  ++  a       +  ++    ++dla+++Y+SGTTG+PKGVmlsh n+v+ v
   KHJ33285.1 120 ALV--TQKSCLAVAKKACQEVGIDSSRIILIGDE--KDDCSQFKHFKDFLALkrslnvD--RTTVDPKKDLAFLVYSSGTTGRPKGVMLSHSNIVSDV 211
                  ***..99999777777777777777777777655..44555555555555424566432..33235569****************************9 PP

                  HHHH.HHHCSCCTT.......T-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHHHHCCCHHCHHH CS
  AMP-binding 189 aslk.letrfklke.......ddvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvleallesgalkaakk 278
                    ++ +e + kl++       +d+ l +lp++hi+gl + +  + + G ++v+++k+++   k ++++i+++++t+ ++vP ++  l++s+  +    
   KHJ33285.1 212 LMAHaIE-EGKLRWnggvgndGDKTLGFLPFFHIYGLLCIVHHSTYLGLCMVVIEKFDFN--K-FCAAIQNYRITYANVVPPIVLLLAKSPIVS---- 301
                  9987533.4334334566778****************999*****************993..3.56***********************98887.... PP

                  HCCGTT-SEEEEESS-EBHHHHHHHHHHHTCEEEEEEEEGGGSSECEE.CHCTTTCTSTTS-BEE-TTEEEEEE-TTTSCBEETTSEEEEEEEETTS- CS
  AMP-binding 279 akdlsslrlvllggeplspellrffralfgeevlegYGlTEttgvvtv.lpleedkkklgsvGkplpgvevkivDeetgepvpdgeeGellvrgpgvm 375
                  ++dlsslr++ +g++pl +el+++++a+ + +v +gYGl+Et++v++   + e+  +++gsvG  lp+  +k v e+ g++vp g++Gel+v+gp+v+
   KHJ33285.1 302 RYDLSSLRMLNSGAAPLTRELVEALYARIKVPVKQGYGLSETSPVTHLqSW-ENWYSTIGSVGSLLPNLTAKYVSED-GKEVPVGHTGELWVKGPNVF 397
                  77********9******************99***************76445.444489******************9.9******************* PP

                  SEBTT-HHHHHHHEEETCCEEEEEEEEEEETTSEEEEEEECCCEEEE CS
  AMP-binding 376 kgYlkkpeataeafdsegrwlrTGDlgrldedGyleivgRkkdlikl 422
                   gY ++ eat+ a++ e+++++TGD+g+ d+ G+++i++R+k+lik 
   KHJ33285.1 398 LGYINNVEATQNAIT-EDGYFKTGDVGYQDKSGNFYITDRSKELIKY 443
                  **************9.867**************************97 PP

>> AMP-binding_C  AMP-binding enzyme C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.8   0.0   4.8e-18   2.9e-14       1      76 []     452     531 ..     452     531 .. 0.90

  Alignments for each domain:
  == domain 1  score: 53.8 bits;  conditional E-value: 4.8e-18
                    HHHHHHHSSTTEEEEEEE-----.TTS---EEEEEE------..HHHHHHHHHHHHT-TTTS-S.EEEE-S---B-TTS- CS
  AMP-binding_C   1 evEsalvshpaVaeaaVvGvpde.vkGealvafVvlkdgsea..leeeLkahvrkelgpyavpk.kvvfvdelpktrsGK 76 
                    e+E  l++hp++++aaV+G++d+    e + a+Vvl++++++   +e+++ +++++++ ++  +  v+fv+e+pkt sGK
     KHJ33285.1 452 ELEGLLITHPNIEDAAVIGIQDNeQATELPRAYVVLRRDVAPsgEAEKIMNWLKERVANHKQLRgGVRFVKEIPKTNSGK 531
                    799********************5555*********8774333568***************9999**************9 PP

>> Herpes_ORF11  Herpesvirus dUTPase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   1.4e-05     0.085     240     307 ..      50     115 ..      41     134 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.4e-05
  Herpes_ORF11 240 tveavLafslnpypilvwlkdaatvfilYpgpevvvPpkeetrveynntyeagtpskitaviifgeaa 307
                   ++++ L f  n++ i +w +    v+++Y++++v +P   + ++++ ++++ + p+ + a ++f++++
    KHJ33285.1  50 VERTALEFGKNIKAIWNWKCGD--VLAVYSPNCVDIPSIIWGTLWAGGVLSPSNPNYTLAELVFQLKD 115
                   5678899***************..*******************************9999988888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 4099.33
//
Query:       KHJ33286.1  [L=619]
Description: putative peptidyl-prolyl-cis-trans isomerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-46  158.9   0.1    2.6e-46  157.8   0.1    1.6  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso
    5.6e-09   36.5   0.0    0.00051   20.8   0.0    4.1  4  WD40           WD domain, G-beta repeat
    9.4e-06   25.9   0.0      0.013   15.8   0.0    3.6  3  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
  ------ inclusion threshold ------
      0.025   13.6   0.3       0.51    9.3   0.1    2.3  2  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.8   0.1   5.9e-50   2.6e-46       3     157 ..     471     617 ..     469     618 .. 0.92

  Alignments for each domain:
  == domain 1  score: 157.8 bits;  conditional E-value: 5.9e-50
  Pro_isomerase   3 dietsskGrivieLfadkaPktvenFlklvkegfYdgttFhRvikgfmvqgGdptgktsageqekkggesi..raipdEitsklkh.krGalamar 95 
                     i+ts  G+i+i+Lf+d aPk+venF+ + k+g+Y+ t+FhRvi++fm+q Gdp g+++        gesi  ++++dE+ s+lkh k+++++ma+
     KHJ33286.1 471 IIHTS-YGDIHIRLFPDAAPKAVENFVLHSKNGYYNDTIFHRVIRKFMIQCGDPLGDGTG-------GESIwgKEFEDEF-STLKHdKPYTVSMAN 557
                    58995.**************************************************9663.......333444689****.89999899******* PP

  Pro_isomerase  96 tgkepnsagsqFfItlkeaphldgkytvFGkVveGmdvvekiekvetdeerpkknvkivsae 157
                    +g  pn++gsqFfIt++++p+ld+k+t+F + ++G+dv+ kie++++ +e+p+ ++ki ++e
     KHJ33286.1 558 AG--PNTNGSQFFITTEKTPWLDNKHTIFARAIQGLDVIHKIENARVYKEKPEVDIKIFNIE 617
                    98..8****************************************99999*******98765 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00059       2.7      21      38 .]      78      95 ..      65      95 .. 0.82
   2 !   20.8   0.0   1.1e-07   0.00051       4      38 .]     104     139 ..     101     139 .. 0.87
   3 ?    1.3   0.0      0.16   7.2e+02      14      38 .]     261     286 ..     247     286 .. 0.74
   4 ?   -3.6   0.0         4   1.8e+04       7      25 ..     387     402 ..     383     406 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00059
                TSSEEEEEETTSEEEEEE CS
        WD40 21 dgawlasGsdDgtvriWd 38
                  ++l+++s Dg v++W+
  KHJ33286.1 78 LTDFLITSSVDGVVKFWK 95
                4567*************6 PP

  == domain 2  score: 20.8 bits;  conditional E-value: 1.1e-07
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++++++H + + s++ s dg+ +a+++ D+t++++d
  KHJ33286.1 104 VKEYRAHtGEIKSVSSSTDGRSFATAGSDKTIKMFD 139
                 789****777*************97655*****998 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.16
                 EEEEEETTSSEEE.EEETTSEEEEEE CS
        WD40  14 tslafspdgawla.sGsdDgtvriWd 38 
                 tsl  sp+g+ ++  +  D+ +r+++
  KHJ33286.1 261 TSLTISPSGSQFCiISYPDRRIRLFN 286
                 88888999999642456699999987 PP

  == domain 4  score: -3.6 bits;  conditional E-value: 4
                 EESS...SSEEEEEEETTSSEE CS
        WD40   7 ltGH...ssvtslafspdgawl 25 
                 + G+   +++t +      a+ 
  KHJ33286.1 387 YQGQpqkKGITTV------AMA 402
                 6677654559999......443 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0     3e-06     0.013      35      90 ..     108     161 ..      86     163 .. 0.89
   2 ?    2.0   0.0     0.056   2.5e+02      51      91 ..     169     212 ..     165     213 .. 0.80
   3 ?    3.2   0.0     0.025   1.1e+02      35      79 ..     254     299 ..     240     309 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 3e-06
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                   ++ +e++s++ + dg+ +a a sd +++++d+ + ++++ +s++s+   +c+ W 
   KHJ33286.1 108 RAHTGEIKSVSSSTDGRSFATAGSDKTIKMFDVVTFDLLSMISMEST--PKCVCWI 161
                  67889****************************************99..7999996 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.056
  ANAPC4_WD40  51 klLavaysdg.evrllda..esgkvvhslsvksekavtclgWge 91 
                  +lLav+ + + +++++d   e++  +h+++  + + vt + +++
   KHJ33286.1 169 SLLAVSNEANsHIQIYDGggENQAPIHTITRLHRSIVTLMAFND 212
                  689998765549****954489999***9999999999998875 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.025
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLa.vaysdgevrlldaesgkvvhslsvk 79 
                  +k++ + +sL  +p+g+ ++ ++y d ++rl++  +gk+ ++++ +
   KHJ33286.1 254 KKNKVSPTSLTISPSGSQFCiISYPDRRIRLFNFLTGKLYRTYDES 299
                  455566679999999976652689**************99988655 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.014        61     194     216 ..      74      96 ..      60     113 .. 0.74
   2 ?    9.3   0.1   0.00011      0.51     186     227 ..     109     158 ..      96     185 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.014
    Ge1_WD40 194 afspdGtalatasedGevkffqv 216
                 +++p    l t+s dG+vkf++ 
  KHJ33286.1  74 TMTPLTDFLITSSVDGVVKFWKK 96 
                 55566667899**********74 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00011
    Ge1_WD40 186 ehs.liveaafspdGtalatasedGevkffqvylede.......eeprCL 227
                  h+ +i + + s+dG + ata +d ++k+f v  +d        ++p+C+
  KHJ33286.1 109 AHTgEIKSVSSSTDGRSFATAGSDKTIKMFDVVTFDLlsmismeSTPKCV 158
                 45558999999*********************988765566665677776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (619 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 4556.21
//
Query:       KHJ33287.1  [L=227]
Description: hypothetical protein EV44_g6232 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0046   17.5   6.8     0.0046   17.5   6.8    2.4  2  HIP1_clath_bdg   Clathrin-binding domain of Huntingtin-intera
  ------ inclusion threshold ------
        1.1    7.4   7.0       0.27    9.4   1.3    2.0  2  Fusion_gly       Fusion glycoprotein F0
        1.4    7.2  14.9        2.1    6.6  14.9    1.3  1  WDCP             WD repeat and coiled-coil-containing protein
        2.2    8.2  14.3       0.06   13.2   4.4    2.7  3  Sec8_exocyst     Sec8 exocyst complex component specific doma
        4.7    5.0  15.9        5.5    4.8  15.9    1.1  1  V_ATPase_I       V-type ATPase 116kDa subunit family


Domain annotation for each model (and alignments):
>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   6.8   1.3e-06    0.0046      35      91 ..      19      75 ..       3      84 .. 0.89
   2 ?    2.4  11.1     0.069   2.5e+02      18      98 ..     108     187 ..      96     188 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.3e-06
  HIP1_clath_bdg 35 elerlkeeaerkleeqkeelekLkreleakraelarlkssLesseqsgeqlssqlaa 91
                    ++++lk++++ k  ++ +e+ kLkr+le+++ el ++ks +es e ++++ ++ la+
      KHJ33287.1 19 NMNELKRQTSIKKVNKGSEIAKLKRDLENSKSELREAKSLIESLEDKNKKYKKMLAE 75
                    7999********************************************999998886 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.069
  HIP1_clath_bdg  18 arqaqeeverekkeleeelerlkeeaerkleeqkeelekLkreleakraelarlkssLesseqsgeqlssqlaaLqaEkes 98 
                     +r++   ++ + k+l++ +   +++ +  ++ q +e +  k+e+++++ + ++  +s +++e+ +e+ls+  a L++ k++
      KHJ33287.1 108 TREQNTILKSKTKDLSKLFIMDRKDVQTTEKSQDFENN-TKKEIAEQKLDKDERDESCDENEKFEETLSEMFARLEQKKDK 187
                     55555555555566666666666666666667777655.8*************************************9986 PP

>> Fusion_gly  Fusion glycoprotein F0
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   1.3   7.5e-05      0.27     424     473 ..      24      73 ..       7      82 .. 0.87
   2 ?    1.3   0.4     0.022        79     362     474 ..      98     209 ..      78     213 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 7.5e-05
                 --B---SHHHHHHHHHHHHHHHHHHHHHHHHHCCCCTCCCHHHHHTTXXX CS
  Fusion_gly 424 gppisveevdisaelskvnesleqskdlleesnkiLdsvnkkllstaivi 473
                 + + s+++v+  +e++k + +le+sk +l+e++ +++s + k+++ + ++
  KHJ33287.1  24 KRQTSIKKVNKGSEIAKLKRDLENSKSELREAKSLIESLEDKNKKYKKML 73 
                 55678999999*****************************9999888776 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.022
                 EE-TTTS-EEETTT-SEE---TT..-S-EEE-TTT-SEEEETTEEEE--S-SS-TTTTCCGS----B---SHHHHHHHHHHHHHHHHHHHHHHHHHCCC CS
  Fusion_gly 362 vAncksvtCtcgtkkrpIiqkae..kgltyisnddcdtvsvdgivlklskklanveaknlsiklgppisveevdisaelskvnesleqskdlleesnki 458
                 +  c+ + C   ++++++  k +    l +++ +d++t +    +++ + k + +e+k+ + + +     e+  ++  ls++++ leq kd++ +  k+
  KHJ33287.1  98 LKRCEDLLCDTREQNTILKSKTKdlSKLFIMDRKDVQTTE-KSQDFENNTKKEIAEQKLDKDERDE-SCDENEKFEETLSEMFARLEQKKDKVPNL-KK 193
                 5567777787777776665443311345567777777765.4566777776666666555544333.34466679999999999999999998764.56 PP

                 CTCCCHHHHHTTXXXX CS
  Fusion_gly 459 Ldsvnkkllstaiviv 474
                 L+  + +++s+++ i+
  KHJ33287.1 194 LSPYGSWNQSMEVTII 209
                 7888888887777765 PP

>> WDCP  WD repeat and coiled-coil-containing protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6  14.9   0.00059       2.1     451     623 ..      46     213 ..       4     220 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.00059
        WDCP 451 lssllnkaekkklieslskesqkqkrellltastsiqseksgrkLieeiksleqsplssvvdlsekassessvaletldaepvnrsaalasasstsdes 549
                  +s  ++ e k liesl  +++k k+ l   +  s+ ++ + ++Li+e k l ++++   +d+ e++   + ++ +t+d ++   +    ++ +++++ 
  KHJ33287.1  46 ENSKSELREAKSLIESLEDKNKKYKKMLAESQFVSSLEKMESQSLIDETKDLLKRCEDLLCDTREQN---TILKSKTKDLSKLFIMDRKDVQTTEKSQD 141
                 3445567788999999988877666665556666777888999*******99999999999966644...55555555555444444333333333333 PP

        WDCP 550 srpespkvekkknlekekeaeqlskelerlsekltevqqsLseltdllqngkksspvYplsqdppyvhityqks 623
                    +++k   +++l+k+++ ++ + e e+  e+l+e+  +L + +d + n kk sp Y + ++   v+i+ q+ 
  KHJ33287.1 142 FENNTKKEIAEQKLDKDER-DESCDENEKFEETLSEMFARLEQKKDKVPNLKKLSP-YGSWNQSMEVTIIAQNL 213
                 3333333333444444433.344556677777777777778888888888777665.66666666677777765 PP

>> Sec8_exocyst  Sec8 exocyst complex component specific domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   4.4   1.7e-05      0.06      86     132 ..      36      82 ..      24      88 .. 0.82
   2 ?    0.4   0.2      0.15   5.4e+02      82     118 ..      85     121 ..      76     129 .. 0.72
   3 ?   -0.5   0.5      0.28     1e+03      79     128 ..     134     183 ..     130     195 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.7e-05
  Sec8_exocyst  86 ekvselKesleeakkklstkkkeLkelnarsakykevieiLdaieel 132
                   +++++lK++le++k++l + k+ ++ l+++++kyk+++   + ++ l
    KHJ33287.1  36 SEIAKLKRDLENSKSELREAKSLIESLEDKNKKYKKMLAESQFVSSL 82 
                   5799*********************************9755555554 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.15
  Sec8_exocyst  82 qesqekvselKesleeakkklstkkkeLkelnarsak 118
                   +esq+ + e K+ l+  +  l++++++ + l+ +++ 
    KHJ33287.1  85 MESQSLIDETKDLLKRCEDLLCDTREQNTILKSKTKD 121
                   3688899999999999999998888876666666555 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.28
  Sec8_exocyst  79 ssiqesqekvselKesleeakkklstkkkeLkelnarsakykevieiLda 128
                   ++ ++sq+  ++ K++++e k +  +++++ +e ++   +++e+   L++
    KHJ33287.1 134 QTTEKSQDFENNTKKEIAEQKLDKDERDESCDENEKFEETLSEMFARLEQ 183
                   55567777777777777777766666666666666666666666666655 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  15.9    0.0015       5.5       7     149 ..      27     170 ..      21     211 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0015
  V_ATPase_I   7 glvqfrDlnedvnafqrkfvkevrrcdemerklrfleeeieklekavikeeeaeesleapeekeldeleeelekleeelkelnenleklkkelnelvel 105
                 + ++  +  +++++++r+  ++   + e +  ++ le++ +k++k+ ++++  ++ ++ ++++ +de ++ l++ e+ l +++e+++ lk+++++l +l
  KHJ33287.1  27 TSIKKVNKGSEIAKLKRDLENSKSELREAKSLIESLEDKNKKYKKMLAESQFVSSLEKMESQSLIDETKDLLKRCEDLLCDTREQNTILKSKTKDLSKL 125
                 556666667788899999999999999***************99988888887888888899999999999*************************999 PP

  V_ATPase_I 106 kavlekakefleeeeeeeeeeeseeeeee.keeeeeeeseeeeee 149
                   + +k  +  e++++ e+++++e +e++ +++e++e+ +e+e+ 
  KHJ33287.1 126 FIMDRKDVQTTEKSQDFENNTKKEIAEQKlDKDERDESCDENEKF 170
                 888888777777664444444444443443444444444333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2665  (0.148642); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.40
# Mc/sec: 1713.89
//
Query:       KHJ33288.1  [L=380]
Description: putative camp-dependent protein kinase a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.7e-65  219.3   0.0      7e-65  219.0   0.0    1.1  1  Pkinase         Protein kinase domain
    2.1e-32  112.4   0.0    2.8e-32  112.0   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    0.00077   18.5   0.0    0.00095   18.2   0.0    1.1  1  Haspin_kinase   Haspin like kinase domain
     0.0054   16.7   0.0      0.026   14.5   0.0    1.8  2  APH             Phosphotransferase enzyme family
      0.009   15.4   0.0      0.014   14.7   0.0    1.2  1  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.018   13.8   0.0       0.03   13.1   0.0    1.2  1  Pkinase_fungal  Fungal protein kinase
      0.063   12.3   0.0       0.12   11.5   0.0    1.4  1  Seadorna_VP7    Seadornavirus VP7


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.0   0.0   2.7e-68     7e-65       3     264 .]      59     322 ..      57     322 .. 0.92

  Alignments for each domain:
  == domain 1  score: 219.0 bits;  conditional E-value: 2.7e-68
                 EEEEEEEESSEEEEEEE.....ETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS CS
     Pkinase   3 kleklGeGsfGkVykav.....eketgkivAvKkikkekakkkke.kkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgs 94 
                  ++ lG+G+f++V  ++     +++++k +A+K+++k +    k+ ++v +E kil+ l   p+iv+l+ +f++ ++ly++l+y++gge++++l++ + 
  KHJ33288.1  59 LIKILGTGTFARVWLVKlahpaKEDQDKVYALKVLRKVDVIRLKQvDHVNNERKILADLAgYPFIVNLITSFSDRESLYMLLDYCPGGEVFSHLRKAKR 157
                 5789*********7765333335788999***********999999***************************************************** PP

                 --HHHHHHHHHHHHHHHHHHH.HTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHH CS
     Pkinase  95 lseeeakkiakqilegleylH.skgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvilyellt 192
                 ++e+ ++++a++i+  leylH s+g+ +rDlKpeNiL+de+g++K++DFG+ k + +++ + + +gt+eY+APEv+++++++++vD+Ws G++l+e+lt
  KHJ33288.1 158 FDEDCVRFYAAEIVLILEYLHeSRGVAYRDLKPENILLDEEGHVKLVDFGFGKFIGHRE-TYTLCGTPEYIAPEVIQSKGHTTAVDWWSFGILLFEFLT 255
                 *********************8899********************************98.99************************************* PP

                 SS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT.....HHHHHTSGGG CS
     Pkinase 193 gkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt.....aeellqhpyl 264
                 g ppf+++++  +v+k         +il+ +   +p + ++s+eakd++ +l+++d++kRl+     a+ +++hp++
  KHJ33288.1 256 GYPPFWHKSNPLDVYK---------QILN-NPIIFPVDVDLSPEAKDIILQLCTVDRTKRLGnivggAARVKSHPFF 322
                 ******5555443333.........3443.35679999************************999999*******98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.0   0.0   1.1e-35   2.8e-32       3     249 ..      59     305 ..      57     307 .. 0.88

  Alignments for each domain:
  == domain 1  score: 112.0 bits;  conditional E-value: 1.1e-35
                  EEEEEEEESSEEEEEEEEET.TTTSSEEEEEEEEEST..TSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkg.ekekkevkVavKtlke..eateeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkke 96 
                  l k lG G+f++V+  +l +  ke+++   a+K+l++    + ++ +++ +e ki+ +l   p iv+l+   +++e+l+++++y++gG++ ++Lrk  
   KHJ33288.1  59 LIKILGTGTFARVWLVKLAHpAKEDQDKVYALKVLRKvdVIRLKQVDHVNNERKILADLaGYPFIVNLITSFSDRESLYMLLDYCPGGEVFSHLRKA- 155
                  6789*************9997777777788*****7522456677889999********99***********************************8. PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTT.EEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHH CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskk.lvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGv 193
                   ++++ + +  +a+++   +eyL++ + +  rdl   N+Ll+e+ +vk+ DfG  + i ++++y+         +++apE++++k  t++ D WsfG+
   KHJ33288.1 156 -KRFDEDCVRFYAAEIVLILEYLHESRgVAYRDLKPENILLDEEGHVKLVDFGFGKFIGHRETYTLC----GTPEYIAPEVIQSKGHTTAVDWWSFGI 248
                  .89999999999***********97653789***************************777777644....4679*********************** PP

                  HHHHHHTTSSGTTTTS.HHHHHHHHH.HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS CS
  Pkinase_Tyr 194 llwEiftlgespypgl.kneevlekl.kegkrlekpekcpeelyelmkkcweedpeeR 249
                  ll+E +t g  p+++  ++ +v++++ ++    +   + ++e ++++ +  + d ++R
   KHJ33288.1 249 LLFEFLT-GYPPFWHKsNPLDVYKQIlNNPIIFPVDVDLSPEAKDIILQLCTVDRTKR 305
                  *******.****999868899***9956666678888899999999888777777777 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   3.7e-07   0.00095     146     256 ..      97     211 ..       5     221 .. 0.72

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 3.7e-07
  Haspin_kinase 146 slkelkslklvkgtypglllllqdkvlkek..pdfyseqqlflvlllkdkGtdLeev.klkswkqalsifw..qivkiLyvaEtkfeFEHRdLhld 236
                     ++ lk++  v+    ++l  l  +    +  + f + + l+++l    +G+  +++ k k +++    f+  +iv iL    ++     RdL+ +
     KHJ33288.1  97 DVIRLKQVDHVNNE-RKILADLAGYPFIVNliTSFSDRESLYMLLDYCPGGEVFSHLrKAKRFDEDCVRFYaaEIVLILEYLHESRGVAYRDLKPE 191
                    23344444444444.3333333333222225566677777999999999*******988899987666677457999999999999********** PP

  Haspin_kinase 237 niLvdknlnvtlidlklsRl 256
                    niL+d++++v l+d+  +++
     KHJ33288.1 192 NILLDEEGHVKLVDFGFGKF 211
                    **************987765 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.18   4.6e+02      22      89 ..      87     153 ..      61     168 .. 0.61
   2 !   14.5   0.0     1e-05     0.026     162     195 ..     172     208 ..     139     212 .. 0.68

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.18
                 -EEEEEE-TT.....S-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SSHHHHH CS
         APH  22 ryvlrrnppa.....raaeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllrklsaa 89 
                  y+l++ ++      +   ++ +e ++l+ La+ ++    ++ + t+  +++ l+ l+ y+pg  +    + +
  KHJ33288.1  87 VYALKVLRKVdvirlKQVDHVNNERKILADLAGYPF----IVNLITSFSDRESLYMLLDYCPGGEVFS--HLR 153
                 455555444333222244555566666666666644....6666679999999999999999988777..344 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 1e-05
                 S.....SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT CS
         APH 162 g.....elptvllHgDlhpgNllvdpddgrvtGviDfed 195
                       ++++++  +Dl+p N+l+d ++g+v  ++Df++
  KHJ33288.1 172 LileylHESRGVAYRDLKPENILLD-EEGHV-KLVDFGF 208
                 344456699****************.66666.6****96 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   5.6e-06     0.014     150     244 ..     167     254 ..     146     267 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 5.6e-06
  Kinase-like 150 TlqlirlaanLq.akglvhgkftvdnllldekgglmlggft..aLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriw 244
                   ++++ +  +L+ ++g+   +++++n+llde+g ++l +f+  + +   + + l  +++ +  pE++ s+g          t ++d W  G+  +   
   KHJ33288.1 167 AAEIVLILEYLHeSRGVAYRDLKPENILLDEEGHVKLVDFGfgKFIGHRETYTLCGTPE-YIAPEVIQSKGH---------TTAVDWWSFGILLFEFL 254
                  4778888899983589*********************9876115555555555555555.556788888776.........77899999999888765 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.2e-05      0.03     315     400 ..     170     246 ..     165     252 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.2e-05
  Pkinase_fungal 315 aIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHsyrhDLESf 400
                      + +++ L++  g+  rD   +Nil+      +e +  L+D+ + k +++    ++  +  GT+e++a ev++ + H+   D  Sf
      KHJ33288.1 170 IVLILEYLHESRGVAYRDLKPENILLD-----EEGHVKLVDFGFGKFIGH----RETYTLCGTPEYIAPEVIQSKGHTTAVDWWSF 246
                     5778999*******************9.....678889***********5....344679*************999**99887766 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   4.5e-05      0.12     154     186 ..     174     205 ..     160     208 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.5e-05
  Seadorna_VP7 154 LmdfhsestnllhGDcnpenlmcDknGylklvD 186
                   L+ +h es ++ + D +pen++ D+ G +klvD
    KHJ33288.1 174 LEYLH-ESRGVAYRDLKPENILLDEEGHVKLVD 205
                   78889.999999********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       356  (0.0198561); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 3150.83
//
Query:       KHJ33289.1  [L=636]
Description: putative methylenetetrahydrofolate reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.2e-111  372.6   0.0   2.3e-111  371.7   0.0    1.4  2  MTHFR     Methylenetetrahydrofolate reductase


Domain annotation for each model (and alignments):
>> MTHFR  Methylenetetrahydrofolate reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  371.7   0.0  1.3e-115  2.3e-111       4     286 ..       9     292 ..       6     293 .. 0.98
   2 ?   -3.6   0.0      0.31   5.5e+03     133     164 ..     386     421 ..     383     424 .. 0.65

  Alignments for each domain:
  == domain 1  score: 371.7 bits;  conditional E-value: 1.3e-115
                 HHHT.SS-EEEEEE---SSHHHHHHHHHHHHHHGGGG-SEEEE---CCCTTHHHHHHHHHHHHHHH-S-EEEEEESTTS-HHHHHHHHHHHHHCT--EE CS
       MTHFR   4 qaleegkalisfEffpPkteegernLleridrleevkplfvdvTwgaggstaeltssiakviqqelgleailhlTctdaskeeldkalekakelGirni 102
                 +a ++g++++sfEffpPkt++g++nL++r+dr++ ++p f+d+Twgagg+ a+lt++++ v+q++ gle+++hlTctd+ ke++d+al+ a+ +G+ ni
  KHJ33289.1   9 EAEKSGHPTFSFEFFPPKTAQGVQNLYDRMDRMHGLGPSFIDITWGAGGNIAQLTVEMVGVAQSYYGLETCMHLTCTDMGKEKVDNALKGAYGAGCTNI 107
                 5566999******************************************************************************************** PP

                 EEE--S--TT-GGC---S----SHHHHHHHHHHHHCGGSEEEEEE-TT--TT-S-HHHHHHHHHHHHHCT--EEEEEE-S-HHHHHHHHHHHHHCT-SS CS
       MTHFR 103 lALrGDppkdedkweekeeefkyaldLvrlireeygdlfdigvaaYPevhpeaksleadlkylkeKvdaGAdfiitQlffdvdkflkfveqvreagidi 201
                 lALrGDpp++++kw++  ++f+ya+dLv++ir++ygd+fdigva+YPe+   ++++e  l +lkeK+daG+ fi+tQ+f+d  +fl++v++vr++gi++
  KHJ33289.1 108 LALRGDPPRQQEKWTAADGGFHYAKDLVKYIRQKYGDYFDIGVAGYPEGCDDQDDPELLLDHLKEKIDAGGTFIVTQMFYDGSNFLEWVSKVRAKGISV 206
                 *************************************************************************************************** PP

                 -EEEEE---SSHHHHHHHHHHHT----HHHHCCCTCHCT-HHHHHHHHHHHHHHHHHHHHHCT.--EEEEE-TT--HHHHHHHHHC CS
       MTHFR 202 piipgimpiksykslkrlaklskvkiPqelldrleeikdddeavkkigielavemvkkllaeg.vkglHlytlnkekaileileql 286
                 piipgimpi++y+s+ r+a+  ++kiP +  ++l+++k+dd+av++ig+ l+ e+++++la+g +++lH+yt+n+++a++++l++l
  KHJ33289.1 207 PIIPGIMPINTYASFIRRANHMGCKIPPKWAKALQDVKNDDAAVRSIGTVLVAELCRNILASGlIHHLHFYTMNLAQATKMVLDEL 292
                 ***********************************************************************************987 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.31
                 HHHHHCGGSEEEEEE-TT--T....T-S-HHHHHHH CS
       MTHFR 133 ireeygdlfdigvaaYPevhp....eaksleadlky 164
                 i e +  +++ gv+++P +++    ea+ ++++l  
  KHJ33289.1 386 IAEIFVKYLQGGVDSFPWGETpitcEADCIKSELID 421
                 555566789999****97665445455556666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (636 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.37
# Mc/sec: 5205.28
//
Query:       KHJ33290.1  [L=883]
Description: putative saff domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.5e-48  164.0   0.0    8.1e-48  163.2   0.0    1.4  1  muHD         Muniscin C-terminal mu homology domain
    1.9e-11   44.1   0.3    4.9e-11   42.8   0.3    1.8  1  FCH          Fes/CIP4, and EFC/F-BAR homology domain
    6.6e-06   26.0   3.9    6.6e-06   26.0   3.9    1.7  2  BAR_3        BAR domain of APPL family
     0.0016   18.1   3.6     0.0028   17.3   3.6    1.3  1  BAR          BAR domain
  ------ inclusion threshold ------
      0.021   13.9   5.4      0.059   12.5   5.4    1.7  1  Atg14        Vacuolar sorting 38 and autophagy-related subuni
      0.044   14.1   0.7       0.14   12.5   0.7    1.8  1  Phage_TAC_4  Phage tail assembly chaperone


Domain annotation for each model (and alignments):
>> muHD  Muniscin C-terminal mu homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.2   0.0   2.7e-51   8.1e-48       2     262 ..     579     882 ..     578     883 .] 0.90

  Alignments for each domain:
  == domain 1  score: 163.2 bits;  conditional E-value: 2.7e-51
                 EEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEE--SSS----...-SEEEEEEETGGGEEEEEE-TTTE...EEEETTEEEE-TTTTBT-E.EEEEEEE CS
        muHD   2 gLnasiiEtvnAwFkdgevtkskvvGelaLaynaspaasltl...pdkltvrlenfeklekvapNpafvte.ekqkdgeykinlsalarktktvalkYq 96 
                 gLn siiEtv+  F ++ +    + Ge+a++ n  +++++ l     + t++l+n+++l+ ++pN+ +v+   ++ ++++ inls + +k  + +++Y+
  KHJ33290.1 579 GLNCSIIETVSCSFDGETPVLCTINGEIAFTHNLATDTNTGLsttRGHDTIKLHNISTLDILLPNKLLVQPiSSEYKDQFLINLSLIPSKF-LTGFTYR 676
                 9********************************9998886666668999********************88888999**************.******* PP

                 EES......---SEEEEEEEEE-SSEEEEEEEEEE-TTTT--E.EEEEEEEEEEEB-SS-EEEEEESSS--B-SSS-EEEEE-SSEEEETT---EEEEE CS
        muHD  97 vhadpskasascPlilkpvWkleehqasviltyslnpslaiasavtLenlvlvvnldgsratsvqskPqatfskeksrvtWklpeleltsdsdegklla 195
                 + +++ ++ +  P+ +k+ Wk+++++  ++l+yslnp+++++ ++   nl+l++++ ++ a+s+q+kP++t+ k+k+ v+W+l +++l+  +  +k +a
  KHJ33290.1 677 IPSSDISK-SPLPILIKSLWKYQANKLGLVLEYSLNPAFSTT-PISFINLILIAHYANTPASSCQTKPSGTHLKDKNLVYWRLGDITLDGTK--HKAVA 771
                 **977755.789*************************75554.49****************************************9998887..8**** PP

                 EEEESS---.-SS-EEEEEEE---S-SS-....---EEE..........................EEESSS-T.....................T---- CS
        muHD 196 rfsteesae.kpgkVevkFeveegatlsr....lgisll..........................eqkkeedPfa.................aeegktw 246
                 rfs +es   +pg+Ve+k+e++++ + s                                     eq++e dPfa                   e ++w
  KHJ33290.1 772 RFSGTESVIpEPGHVEAKWELNASVEASLlstyK----NlggdgvrimrllkssdtaieesteekEQMNEGDPFAdklvevdttqpkaskinRVENQNW 866
                 ***9888766************777666654550....24555555556689999999999999666999********************9977789** PP

                 EE-EEEEEEEEEEEE. CS
        muHD 247 kevptkrklvaGkYls 262
                 +++pt+ klv+GkY+s
  KHJ33290.1 867 QDIPTSMKLVSGKYIS 882
                 **************98 PP

>> FCH  Fes/CIP4, and EFC/F-BAR homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.8   0.3   1.6e-14   4.9e-11       3      76 ..      23      94 ..      21      95 .. 0.95

  Alignments for each domain:
  == domain 1  score: 42.8 bits;  conditional E-value: 1.6e-14
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT----TT.-.....HHHHHHHHHHHHHHHHHHHHHH CS
         FCH  3 kvlqkrleqgialledlqeflkeRaeiEkeYakkLqkLakkylkrr.kkkseestlvtawtvlleeteklaqshl 76
                 +l++r+++ ++ + +++++l+eR +iE+ Ya +L+kL+k+ l+       + + + + w++l++ te++a+sh 
  KHJ33290.1 23 AKLNDRVKKITKVNLEIADWLQERRKIEEIYATSLRKLSKRQLNDVwG---HMGVFEKPWKQLMTATEDIAKSHN 94
                6899****************************************8777...78*********************5 PP

>> BAR_3  BAR domain of APPL family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   3.9   2.2e-09   6.6e-06      24     193 ..      22     201 ..      19     241 .. 0.89
   2 ?   -2.8   0.0       1.4   4.1e+03      22      61 ..     276     315 ..     269     325 .. 0.48

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 2.2e-09
       BAR_3  24 leelekklkkllKlckrlieagkaysaaqkqfaqsLrelkkeskgdeetd.....esLkkfsellqelenehtilldqaqrsikkpLekFrke..dlke 115
                 + +l++++kk++K   ++ +  ++  +  +  a+sLr+l+k + +d   +     +  k+++++ + +++ h+ +++ +++ +  pL +F++   ++ +
  KHJ33290.1  22 VAKLNDRVKKITKVNLEIADWLQERRKIEEIYATSLRKLSKRQLNDVWGHmgvfeKPWKQLMTATEDIAKSHNYFANCIEKDVELPLRNFATTndEMAN 120
                 789****************************************777655555666***********************************986336889 PP

       BAR_3 116 vkekkkkFdkesekleaaleknaqlskk...kkeseleeadnelkatrkkfhqasldyvlqinelqerkkfeiletllsfm 193
                 v++ + +      +le a++kn +ls+k     +s++e a+n l+a+r++   ++   + ++++l+er+  ++ + l ++ 
  KHJ33290.1 121 VTTMRGNISSLARELEDAQTKNDRLSRKggkASASKVEAASNRLQAARQQWDVQAAFVFESLQALDERRVNHLRDLLTQYQ 201
                 99***********************9973335788999**************99999999********9888888777775 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.4
       BAR_3  22 aeleelekklkkllKlckrlieagkaysaaqkqfaqsLre 61 
                   +   ++++kkl + +  l+   k++ + +++ + sL++
  KHJ33290.1 276 IQARMETSEIKKLQRMGTLLTRRRKSVQSVFRSASPSLKK 315
                 3333334444454444444444444444444444444444 PP

>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   3.6   9.5e-07    0.0028      88     217 ..      68     201 ..      21     211 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 9.5e-07
         BAR  88 lgedss.fgkalekygeavkklaqteeelekrvetnfldplrell..ekefkeiqkerkklehkrlDyDaakarlkklktkkskkakde.ekaeeelrk 182
                  ++ ++ f k  +++  a +++a+  + +   +e+++  plr+++  ++e+ ++  +r + +++   + +a+++  +l +k  k + ++ e+a + l+ 
  KHJ33290.1  68 VWGHMGvFEKPWKQLMTATEDIAKSHNYFANCIEKDVELPLRNFAttNDEMANVTTMRGNISSLARELEDAQTKNDRLSRKGGKASASKvEAASNRLQA 166
                 344444455778899999*************************9733689***************************9987776666669********* PP

         BAR 183 AqqkfeesneelkaeLpnllalevefvnqlqafve 217
                 A+q+ + ++  + ++L+ l + +v+++++l + ++
  KHJ33290.1 167 ARQQWDVQAAFVFESLQALDERRVNHLRDLLTQYQ 201
                 ***************************66655444 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   5.4     2e-05     0.059      54     186 ..     113     249 ..      78     257 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2e-05
       Atg14  54 eaeqledkiknkkakleelksliadlrerlqelkdk.lsqlkkeieekkkklaklsdklkkRrsdleslqneleerrkkqiaklqdaikrieqklssls 151
                  ++++ +++ + + ++++l  + +d + ++ +l+ k  +   +++e+++++l++ +++     +      + l err ++++ l+++++++e  + +l+
  KHJ33290.1 113 TTNDEMANVTTMRGNISSLARELEDAQTKNDRLSRKgGKASASKVEAASNRLQAARQQWDVQAAFVFESLQALDERRVNHLRDLLTQYQTHEADHIQLN 211
                 444555555555555665555555555555554433134555666666666666666666666655566679*************************** PP

       Atg14 152 sktles...rsslcselaklyglrrtsyergkwvfskn 186
                 ++  es   ++ ++s+ a++ + ++t+  + k+++ k 
  KHJ33290.1 212 REAVEStlkSLIEISTEAEIKNWSQTDGAKKKNFKTKG 249
                 ******99999999999999999999999999998766 PP

>> Phage_TAC_4  Phage tail assembly chaperone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.7   4.6e-05      0.14      27     119 ..     103     202 ..      96     207 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.6e-05
  Phage_TAC_4  27 kakveftfkamdrkelaeleeereqseakeeekaaae.......edleasidkglaldaelikevatGWdldeefneenielLvekfpgaleailaaY 117
                  ++++ +   a +++e+a+++  r++      e  +a+        +  +  +++++   + +++  + Wd++++f  e+++ L e+ ++ l+ +l++Y
   KHJ33290.1 103 DVELPLRNFATTNDEMANVTTMRGNISSLARELEDAQtkndrlsRKGGKASASKVEAASNRLQAARQQWDVQAAFVFESLQALDERRVNHLRDLLTQY 200
                  455555555558899999999998443333332232233556663334455677888899999*********************************** PP

  Phage_TAC_4 118 de 119
                  + 
   KHJ33290.1 201 QT 202
                  96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (883 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       834  (0.0465168); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.71u 0.25s 00:00:00.96 Elapsed: 00:00:00.43
# Mc/sec: 6170.54
//
Query:       KHJ33291.1  [L=879]
Description: putative at hook domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-42  143.5   6.0    5.4e-21   75.0   0.0    2.7  2  BIR       Inhibitor of Apoptosis domain
  ------ inclusion threshold ------
      0.065   13.3   0.1         18    5.4   0.0    2.8  2  zf-BED    BED zinc finger


Domain annotation for each model (and alignments):
>> BIR  Inhibitor of Apoptosis domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.0   0.0     6e-25   5.4e-21       1      72 [.      16     103 ..      16     104 .. 0.84
   2 !   68.2   3.5     8e-23   7.2e-19       1      72 [.     129     201 ..     129     202 .. 0.94

  Alignments for each domain:
  == domain 1  score: 75.0 bits;  conditional E-value: 6e-25
         BIR   1 RlatFkkn....................WpeskkeakpsaeeLaeaGFyytptseskdnvqCfyCklaldgweedDdpleeHkkhspkCefl 72 
                 Rla+F k                     Wp++    ++sa++La+ GFyy p+ +s+dnv Cf+C++ ldgwee+D+p+ eH++hsp+C+++
  KHJ33291.1  16 RLASFLKVhpvskrrasntslkgpkslkWPHK----FLSASDLAKSGFYYLPSLTSPDNVVCFLCHKLLDGWEETDNPFVEHLRHSPNCGWA 103
                 6666644456666666666667777777**65....58999*************************************************97 PP

  == domain 2  score: 68.2 bits;  conditional E-value: 8e-23
         BIR   1 RlatFkknWpeskkeak.psaeeLaeaGFyytptseskdnvqCfyCklaldgweedDdpleeHkkhspkCefl 72 
                 R+atF ++Wp++ k+ + ++ ++++eaG+ ytpt +s+d+v+C yC l++d+w ++D+p ++H++ sp+C+f+
  KHJ33291.1 129 RKATFADRWPHEDKKGWkCHVKQMIEAGWSYTPTLQSDDMVTCNYCALTFDNWGKNDKPSDKHYESSPDCPFF 201
                 99********8887776377799************************************************98 PP

>> zf-BED  BED zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0    0.0035        31      15      41 ..      69      96 ..      59      97 .. 0.75
   2 ?    5.4   0.0    0.0021        18       4      23 ..     157     175 ..     155     182 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0035
                S--EETTTTEE----SSTHH.HHHHHHH CS
      zf-BED 15 qkavCryCgkilsrgggttn.LkrHLrr 41
                 ++vC  C+k l++  +t n +  HLr+
  KHJ33291.1 69 DNVVCFLCHKLLDGWEETDNpFVEHLRH 96
                68********999986665547777776 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0021
                 TSSS----GGSS--EETTTT CS
      zf-BED   4 WkyftpvslkeqkavCryCg 23 
                 W+y   ++  + +++C+yC 
  KHJ33291.1 157 WSYTPTLQ-SDDMVTCNYCA 175
                 55555555.6889******6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (879 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1154  (0.064365); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.41
# Mc/sec: 6508.43
//
Query:       KHJ33292.1  [L=370]
Description: putative cell division protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      4e-45  154.2   0.0      1e-44  152.9   0.0    1.6  2  Pkinase         Protein kinase domain
    2.2e-18   66.5   0.0    3.6e-18   65.8   0.0    1.3  1  Pkinase_Tyr     Protein tyrosine kinase
     0.0014   17.5   0.0     0.0023   16.8   0.0    1.2  1  Pkinase_fungal  Fungal protein kinase
  ------ inclusion threshold ------
      0.043   13.7   0.0        0.4   10.6   0.0    2.0  2  APH             Phosphotransferase enzyme family
      0.057   12.8   0.0      0.094   12.1   0.0    1.2  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
       0.15   11.7   0.0       0.25   10.9   0.0    1.4  1  FTA2            Kinetochore Sim4 complex subunit FTA2


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.2      0.57   1.7e+03      25      56 ..      13      44 ..       9      48 .. 0.82
   2 !  152.9   0.0   3.5e-48     1e-44       3     264 .]      84     369 ..      82     369 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.57
                EEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS CS
     Pkinase 25 kivAvKkikkekakkkkekkvlrEikilkklk 56
                  v  K +++e+++++++ ++l+E   ++k++
  KHJ33292.1 13 SDVSKKALEREQREDSHKIAILQERDAFNKSE 44
                56788999999999999999999999888765 PP

  == domain 2  score: 152.9 bits;  conditional E-value: 3.5e-48
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEE.EEEE--TTEBHHHHHHHHSS--HHHH CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdely.lvleyveggeladllerkgslseeea 100
                 + + + +G ++ Vy++       + A+K+i++ ++ + +  +   Eikil +l+hp i++++++f+++++++ +v+ y +   l dl++ +++++++ +
  KHJ33292.1  84 NCHLISSGFSSDVYRCG------KAALKVIRQTHNIEPH--NPELEIKILSSLSHPSIIKFIKSFRNSENFLvIVFPYQPLA-LCDLYS-DQAIPKTLL 172
                 55667778888888887......79******99998855..5889*********************9777653888888855.*****8.689****** PP

                 HHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCS......BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHH CS
     Pkinase 101 kkiakqilegleylHskgiiHrDlKpeNiLid.ekgelKitDFGlakelesssk......ltsfvgtseYlAPEvl.keneyskkvDvWslGvilyell 191
                 + i+k i++gl+ylH+++iiHrD+Kp+NiL+  ++g  +i+DFG a +   s +      +  +vg+  Y+APE l +++ y+++ D+W++G +l+e l
  KHJ33292.1 173 RAIFKDIFSGLKYLHDRKIIHRDIKPSNILLAsSSGPARICDFGTAWHPVLSLPfepsshKFLEVGSTAYRAPETLfGNRAYDTSLDLWACGAVLAESL 271
                 ********************************88888*******99876665555665557778************9999******************9 PP

                 HS..S-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS.......................-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 192 tg..kppfsgekgkekvekeldqlekilkilg.etkeklpeasei.......................seeakdllkkllkkdpkkRltaeellqhpyl 264
                  +  kp+f++++  ++  ++l  + +++k+lg +tke++pea  +                       ++  +dl+++l+ ++ + Rlta+++l+h ++
  KHJ33292.1 272 RNppKPLFQSREA-HEDGNQLCLILSMFKTLGtPTKESWPEACAFstppfewykefpkrdwsviltgvDSLGIDLVSNLVVWESNMRLTAANVLDHAFF 369
                 8744567774444.4344444446788888888899999999999***********************9***************************998 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.8   0.0   1.2e-21   3.6e-18      28     206 ..      99     278 ..      82     301 .. 0.80

  Alignments for each domain:
  == domain 1  score: 65.8 bits;  conditional E-value: 1.2e-21
                  EEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSS.EEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTE CS
  Pkinase_Tyr  28 evkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeep.llivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskkl 124
                  + k a+K+++++++ e  ++   e+ki+++l+hp i+k++    ++e+ l+iv+ y +   L +   +   +++  + l  +  ++ +G++yL+++k+
   KHJ33292.1  99 CGKAALKVIRQTHNIE-PHNPELEIKILSSLSHPSIIKFIKSFRNSENfLVIVFPYQPLA-LCDLYSD---QAIPKTLLRAIFKDIFSGLKYLHDRKI 191
                  668899*998777766.777788*********************8887466667776665.5554444...4688888889999************** PP

                  EEST-SGGGEEEEETT.EEEE-STTTHEETTTSSEE...EETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHHHHHHHHHHTTSSGTT CS
  Pkinase_Tyr 125 vHrdlaarNvLlsenk.vvkisDfGLardiekddey...vkkeeaklpvkWmapEslkekk.ftsksDvWsfGvllwEiftlgespy 206
                  +Hrd+   N+Ll++++  ++i+DfG a +   +      ++k  +  +  + apE+l+ ++ + ++ D W+ G +l E + +  +p+
   KHJ33292.1 192 IHRDIKPSNILLASSSgPARICDFGTAWHPVLSLPFepsSHKFLEVGSTAYRAPETLFGNRaYDTSLDLWACGAVLAESLRNPPKPL 278
                  ************985549*******9987644443312145555566789******99877699999***********988777665 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   7.7e-07    0.0023     305     343 ..     168     206 ..     159     221 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 7.7e-07
  Pkinase_fungal 305 pkellea.lrDaIkghrsLflkagiLHrDiSenNilitds 343
                     pk ll+a ++D   g++ L+ + +i+HrDi   Nil+  s
      KHJ33292.1 168 PKTLLRAiFKDIFSGLKYLH-DRKIIHRDIKPSNILLASS 206
                     6778877368999*******.***************9844 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.12   3.5e+02       3      27 ..      86     110 ..      84     174 .. 0.77
   2 ?   10.6   0.0   0.00013       0.4     163     196 ..     186     218 ..     154     220 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.12
                 EEE--.SSCEEEEEEETT--EEEEE CS
         APH   3 relsggasnrtylvttpagryvlrr 27 
                 + +s+g+s+++y+++ +a +++ + 
  KHJ33292.1  86 HLISSGFSSDVYRCGKAALKVIRQT 110
                 6799**********99654444433 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00013
                 SS-EEEE-SS-SGGGEEEC....TTEEEEE---TT- CS
         APH 163 elptvllHgDlhpgNllvd..pddgrvtGviDfeda 196
                   ++ ++H+D++p N+l+   +++ r   + Df++a
  KHJ33292.1 186 LHDRKIIHRDIKPSNILLAssSGPAR---ICDFGTA 218
                 557789*************7666666...7899887 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.1e-05     0.094     109     155 ..     162     207 ..     153     216 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.1e-05
         Kdo 109 lakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqee 155
                 + + + ++++l ra++k++    + lh++++ H+d+ + nill    
  KHJ33292.1 162 YSD-QAIPKTLLRAIFKDIFSGLKYLHDRKIIHRDIKPSNILLASSS 207
                 444.348899999******************************8775 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   8.3e-05      0.25     169     215 .]     167     219 ..     108     219 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 8.3e-05
        FTA2 169 eqeelevsqlpkllrdlkklhklgIvvrDlkeenyi......dgkLvDlsaai 215
                  ++ l  ++++++ + lk lh   I++rD+k++n++        +++D+++a+
  KHJ33292.1 167 IPKTLLRAIFKDIFSGLKYLHDRKIIHRDIKPSNILlasssgPARICDFGTAW 219
                 5667778899************************9844443335799999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 3054.42
//
Query:       KHJ33293.1  [L=69]
Description: hypothetical protein EV44_g3321 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0011   19.3   0.0     0.0012   19.2   0.0    1.1  1  RNA_pol_3_Rpc31  DNA-directed RNA polymerase III subunit Rpc3


Domain annotation for each model (and alignments):
>> RNA_pol_3_Rpc31  DNA-directed RNA polymerase III subunit Rpc31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   6.6e-08    0.0012       3      57 ..       4      55 ..       2      67 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 6.6e-08
  RNA_pol_3_Rpc31  3 ggrgrgggrsgnleelpwglgeelgeepdtapselfPpl.slpvakplteeersqv 57
                     +g  rg+g++g+l++ +w+   +++ ++d++p+ l+P+  +    ++l ++  +++
       KHJ33293.1  4 RG--RGRGSAGGLKGATWD--YDPTLKLDAKPTDLYPKAsASDCDRKLASKTFQEA 55
                     44..55556899*******..779**************977777777777665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (69 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       220  (0.0122706); expected 358.6 (0.02)
Passed bias filter:                      166  (0.00925874); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 502.10
//
Query:       KHJ33294.1  [L=765]
Description: putative telomerase-binding protein est1a protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-11   44.2   3.8    1.6e-11   44.2   3.8    2.0  2  EST1_DNA_bind    Est1 DNA/RNA binding domain
  ------ inclusion threshold ------
      0.033   12.7   0.0      0.053   12.1   0.0    1.2  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
      0.066   13.4   0.0       0.19   11.9   0.0    1.7  1  Baculo_LEF-10    Baculovirus late expression factor 10 (LEF-1


Domain annotation for each model (and alignments):
>> EST1_DNA_bind  Est1 DNA/RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.13     8e+02      62     185 ..     235     364 ..     203     422 .. 0.67
   2 !   44.2   3.8   2.7e-15   1.6e-11       1     276 [.     425     696 ..     425     702 .. 0.68

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.13
                    -TT-HHHHHHHHHHHHHTT---HHHHHHHHHHTTHHHHHHHHSTTTT..TSSTTGHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHH...HH CS
  EST1_DNA_bind  62 kirkklekgenkqskeskqektpeellkrliilFlrlhgklftgtsfkdelerevlkklqillseslkernlk.daslllkmllinifaie...nl 153
                    + r+kl   ++++ k      t e+l+ r+ + +++l+++  +  sf +   ++v++ l+++ + ++++ + + ++++l  +   +++ ++   ++
     KHJ33294.1 235 AERRKLSMVLQPGIK----PLTQEQLIARVKSIYVELVAIETKCISF-HSKPDSVVRALTQQTDPNSARNLNHdGIQKLIALHRKLLYHYHdffLA 325
                    445555555554444....4677888888888899999888888888.778888888888888777775544443333333333344444433222 PP

                    H-S--SXXXXXXXXX..........XXXXHHHHHHHHHHHHH CS
  EST1_DNA_bind 154 kdkssgeeskektll..........llrlalrfifelfglll 185
                    ++   ++ + +   +          l+r+ +  ++el+ +ll
     KHJ33294.1 326 TQHPLASIPVR---RlaskyamparLWRHGIHSFLELLRHLL 364
                    22222222221...1122444444555555555555555555 PP

  == domain 2  score: 44.2 bits;  conditional E-value: 2.7e-15
                    HHHHHHHHHHH-TTBHHHHHHHHHHHHHTT-HHHHHHHHHHHHHBSB--TTHHHHHHHHHT-TT-HHHHHHHHHHHHHTT---HHHHHHHHHHTTH CS
  EST1_DNA_bind   1 AlrYYllAaellPsnGepyNQlgviaiysedkldavYyylRSllssnpfptAkeNLellfekirkklekgenkqskeskqektpeellkrliilFl 96 
                    A+ +Y +A++  P+ G+ y++++++a  +   ++  +yy  Sl+s +pf +A+e+ ++lfe i++ + +   +            ++  +l ilF+
     KHJ33294.1 425 ARDWYIMASNNSPTTGRLYHHMAILARPN--AIEQLFYYSKSLCSPKPFFSARESILTLFEPILEDNLEL--ID-----------DKHLTLDILFV 505
                    789**********************9865..9*******************************8754444..32...........345566668** PP

                    HHHHHHHSTTTT..TSSTTGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH........HHH-S--SXXXXXXXXX.........XXXX..H CS
  EST1_DNA_bind  97 rlhgklftgtsfkdelerevlkklqillseslkernlkdaslllkmllinifaie........nlkdkssgeeskektll.........llrl..a 173
                    + hg+lft++ +  + +  +++ ++ +l  + k  ++  +s+  +m +in  a+         +lk   ++ee  ++++          +     +
     KHJ33294.1 506 KAHGILFTNSLM--DKFTLIVQMITHQLHHHVKMMKFF-RSQSYHMAIINCVALLeygaksnnLLKLILKNEE--SNVIDmeqnetelqN--ElgS 594
                    ************..555555666666666666665555.5555555555555555333336542222222222..222222344445343..2557 PP

                    HHHHHHHHHHHHHHTGGGTTT.....-SS-THHHHHHHHHHHHHTT-HHHHHHHHT-HHHHHHHHHHHHHHHH-..---------------S..S- CS
  EST1_DNA_bind 174 lrfifelfglllekvetlealkrdketpsatrvLpalrvylswlksnkslledvekdeklvsslsdllnellss..ellnksfdvekdpkrd..yl 265
                    ++ ++ l + +l+++   + l     +++   +    +v+   ++  ++ ++ + k+   ++sl + ln +  s  +l +   d+  +p++d    
     KHJ33294.1 595 FARALNLSNSFLASIIGVTCL----CESDTLPYIHVTLVFIFHIAMYPKTIA-YIKNGFPWESLATKLNGFFLSnyNLTRIEDDEFPNPEDDkiRP 685
                    777777777777777777766....556777777777777777777776663.4455556888888888877666755555555555554445589 PP

                    -HHHHHTTTBG CS
  EST1_DNA_bind 266 leEDielkgFs 276
                    l+ED+ ++gF+
     KHJ33294.1 686 LPEDYAMRGFV 696
                    *********96 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   8.8e-06     0.053     130     205 ..     154     229 ..     134     233 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 8.8e-06
                      HHHHCCTTEEEEEEESS-TTTT----HHHHHHHHHHTT-EEEEEGTTTHTTTS-GGGGT-SEEEEETTTTTTCSSS CS
  Cys_Met_Meta_PP 130 lekaikentklvylEtptnpllkvvDiekiaklakkagvlvvvDntfaspllqrplklgaDivvhSaTKylgGhsd 205
                      +++  + ntk +++E    p+   vD  +ia++a +++   ++ nt      + plk g  +   ++T  ++G ++
       KHJ33294.1 154 VQRRSNGNTKSIWVEGDVAPTRTSVDQSNIASVAIARKRNQFLQNTARPSTHSTPLKSGLQLLNSAGTTNIEGTNE 229
                      5677788*************************************************************99999876 PP

>> Baculo_LEF-10  Baculovirus late expression factor 10 (LEF-10)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.1e-05      0.19       9      31 ..     481     503 ..     473     509 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.1e-05
  Baculo_LEF-10   9 llngiLkDnlfLvdnkYlilnvl 31 
                    l   iL+Dnl L+d+k+l+l++l
     KHJ33294.1 481 LFEPILEDNLELIDDKHLTLDIL 503
                    6788****************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (765 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       564  (0.0314574); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 5234.50
//
Query:       KHJ33295.1  [L=358]
Description: putative methyltransferase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.3e-24   84.5   0.0    1.2e-23   83.7   0.0    1.3  1  Methyltransf_23  Methyltransferase domain
    9.6e-09   35.8   0.0    3.5e-08   34.0   0.0    2.1  1  Methyltransf_25  Methyltransferase domain
    1.6e-06   28.6   0.0    3.6e-06   27.5   0.0    1.6  1  Methyltransf_11  Methyltransferase domain
    1.6e-06   28.0   0.0      0.012   15.4   0.0    2.3  2  Methyltransf_31  Methyltransferase domain
    4.3e-05   24.2   0.0    0.00059   20.5   0.0    2.6  1  Methyltransf_12  Methyltransferase domain
      0.004   17.3   0.0     0.0074   16.4   0.0    1.4  1  FtsJ             FtsJ-like methyltransferase
  ------ inclusion threshold ------
      0.016   14.7   0.0      0.028   13.8   0.0    1.4  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
      0.017   14.6   0.0      0.053   13.0   0.0    1.8  1  Methyltransf_4   Putative methyltransferase
       0.03   13.9   0.0      0.089   12.3   0.0    1.7  2  MTS              Methyltransferase small domain
      0.049   13.0   0.0        4.2    6.6   0.0    2.8  2  Ubie_methyltran  ubiE/COQ5 methyltransferase family
      0.093   12.5   0.0       0.16   11.7   0.0    1.3  1  Methyltransf_16  Lysine methyltransferase


Domain annotation for each model (and alignments):
>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.7   0.0   7.4e-27   1.2e-23       8     163 ..     108     274 ..      96     275 .. 0.81

  Alignments for each domain:
  == domain 1  score: 83.7 bits;  conditional E-value: 7.4e-27
  Methyltransf_23   8 elsdklerllpklraggrvLdiGcGtGillevl.rengf.svtgvDlspeaveiae.kakkaqkdqfdeqeaaepqgkfdlIvlrevlehvpdp 98 
                       l+  ++  +p  + +++vLd+G+GtGi++ ++   ++  ++ gvDlsp++ e+++ +  ++++d +  + + +p ++f++I+ r+    ++d+
       KHJ33295.1 108 NLCGHRLHYAPIGNNPQNVLDMGTGTGIWAIEMgDLYPSaNILGVDLSPIQPEWVPpNVVFMVDDIE--SPWLKPHDYFEYIHGRHIVMAIKDW 199
                      4555556677889********************5444446**************9777777777777..88999******************** PP

  Methyltransf_23  99 pellrqiatllkpgGylllseplasl..........kedrllldwlylvpag..rhisffsarslkelleeaGlevv 163
                      p l+r+++++lkpgG+++l+e+   +          ++ + ++ w+ +++      i+f  a+ l+e+l++aG+ ++
       KHJ33295.1 200 PLLMRRAFDHLKPGGWIELQEIH--HypqcddgsmpANHEVAQFWKVINEGLaaLGINFNAAHLLEEMLRDAGFINI 274
                      *********************63..233567788865666677788876433535559999999*********9765 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.0   2.2e-11   3.5e-08       1      97 []     126     214 ..     126     214 .. 0.88

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 2.2e-11
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCG.BSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHHE CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeeglnvefvqgdaed.lpfedgsfDlvvssgalhhlsdedlekalkeiarvL 93 
                      vLd+G+GtG +++++ + +++a+++gvD+s+ + e +        +nv f++ d+e+ +  +++ f +++ ++ +  +  +d++ ++++++++L
       KHJ33295.1 126 VLDMGTGTGIWAIEMGDLYPSANILGVDLSPIQPEWVP-------PNVVFMVDDIESpWLKPHDYFEYIHGRHIV--MAIKDWPLLMRRAFDHL 210
                      9******************99**********9988654.......5779******996667888*******6334..45579************ PP

                      EEEE CS
  Methyltransf_25  94 kpgG 97 
                      kpgG
       KHJ33295.1 211 KPGG 214
                      ***9 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.0   2.2e-09   3.6e-06       1      94 [.     127     216 ..     127     218 .. 0.90

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 2.2e-09
                      EEET-TTSHHHHHHHHTT..SEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCC..TSS-TT-EEEEEEES-CCC-CCHHHHHHHHHHHEEE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg..arvvgvDlskemlklakekaseeglkvefvvadaek..lpfednsfDlvvssevlhhvedpekalkeiaRvLkp 90 
                      Ld+G+GtG+ a ++ + +  a+++gvDls+ + +++     ++  +v f+v d+e+  l  + ++f  +  ++ ++ ++d+  +++ +   Lkp
       KHJ33295.1 127 LDMGTGTGIWAIEMGDLYpsANILGVDLSPIQPEWV-----PP--NVVFMVDDIESpwL-KPHDYFEYIHGRHIVMAIKDWPLLMRRAFDHLKP 212
                      8**************9999**************888.....33..4899******9322.3457****************************** PP

                      EEEE CS
  Methyltransf_11  91 gGll 94 
                      gG++
       KHJ33295.1 213 GGWI 216
                      **97 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   7.5e-06     0.012       5      38 ..     124     156 ..     121     158 .. 0.93
   2 !   10.3   0.0   0.00028      0.45      55     117 ..     165     226 ..     161     270 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 7.5e-06
  Methyltransf_31   5 lrvlDlGCGtGeltfelaeelgpkaevvGiDise 38 
                       +vlD G+GtG  ++e+   l+p a++ G+D s+
       KHJ33295.1 124 QNVLDMGTGTGIWAIEMG-DLYPSANILGVDLSP 156
                      58****************.99**********997 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00028
  Methyltransf_31  55 nveFeqgdiee..leklledekfDlilsnevlnaladpdkileeiervlkpggilliedprllae 117
                      nv F + die+  l+     + f +i+ + +++a++d +  ++++++ lkpgg + ++++++  +
       KHJ33295.1 165 NVVFMVDDIESpwLK---PHDYFEYIHGRHIVMAIKDWPLLMRRAFDHLKPGGWIELQEIHHYPQ 226
                      899********7333...349*********************************99999984433 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   3.6e-07   0.00059       1      99 []     127     216 ..     127     216 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 3.6e-07
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhlkdirevldnirklLk 94 
                      L+ G+GtG  + ++ +  p ++++gvD+sp +         ++ +  n ++ ++++++  l++ ++f +++  + + ++kd+  +++++ ++Lk
       KHJ33295.1 127 LDMGTGTGIWAIEMGDLYPSANILGVDLSPIQP--------EWVPP-NVVFMVDDIESPWLKPHDYFEYIHGRHIVMAIKDWPLLMRRAFDHLK 211
                      89****************************999........55553.334444444445566669***************************** PP

  Methyltransf_12  95 pgGrl 99 
                      pgG++
       KHJ33295.1 212 PGGWI 216
                      ***86 PP

>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   4.5e-06    0.0074      21      73 ..     122     176 ..      84     200 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 4.5e-06
                 TT-EEEECT-TTSHHHHHHCCT.T.-SEEEEEESSSSHHH...TTEEEECS-CCCS CS
        FtsJ  21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmapl...pgvttiqgditdp 73 
                 + ++v+D g ++G w+  +      ++++++vDl p++p    p+v ++  di +p
  KHJ33295.1 122 NPQNVLDMGTGTGIWAIEMGDLYP-SANILGVDLSPIQPEwvpPNVVFMVDDIESP 176
                 4588***************99965.6***********998899**********886 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.7e-05     0.028     161     195 ..     122     157 ..     109     166 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.7e-05
        PrmA 161 egeevlDvGtGSGiLaiaaakLg.akkvvavDiDev 195
                 + ++vlD+GtG+Gi ai    L   +++++vD+ ++
  KHJ33295.1 122 NPQNVLDMGTGTGIWAIEMGDLYpSANILGVDLSPI 157
                 5689*************9988752679*****9886 PP

>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   3.3e-05     0.053       4      34 ..     125     155 ..     122     160 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.3e-05
                     EEEEET-TTSHHHHHHHHHSTTSEEEEEES- CS
  Methyltransf_4   4 vvleiGcGkGeflvalAkknPdknflGiEir 34 
                      vl++G+G G + +++    P+ n+lG++++
      KHJ33295.1 125 NVLDMGTGTGIWAIEMGDLYPSANILGVDLS 155
                     589*************************975 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   5.5e-05     0.089      32      64 ..     123     155 ..     112     158 .. 0.89
   2 ?   -4.1   0.0       6.2     1e+04     121     134 ..     202     215 ..     201     218 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 5.5e-05
                 CSEEEEET-TTSHHHHHHHHHTTC.EEEEEESB CS
         MTS  32 sgkvlDlGcGaGvlgaalakespeaevtlvdvd 64 
                  ++vlD+G+G+G+ ++++ + +p+a++  vd +
  KHJ33295.1 123 PQNVLDMGTGTGIWAIEMGDLYPSANILGVDLS 155
                 468***********************9999975 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 6.2
                 HHHHHHHHEEEEEE CS
         MTS 121 liaeAkeaLkegGe 134
                 l++ A ++Lk+gG 
  KHJ33295.1 202 LMRRAFDHLKPGGW 215
                 5788999****995 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0    0.0026       4.2      46      81 ..     121     155 ..     106     160 .. 0.84
   2 ?    2.8   0.0     0.037        61     197     217 ..     255     275 ..     179     284 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0026
                      --TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES- CS
  Ubie_methyltran  46 krgakvlDvagGtgDlafklsdsvgekgkvvvlDin 81 
                       ++++vlD+ +Gtg +a+++ d    + ++ ++D++
       KHJ33295.1 121 NNPQNVLDMGTGTGIWAIEMGDLY-PSANILGVDLS 155
                      6789***************99865.56677777776 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.037
                      HS--HHHHHHHHHHTTEEEEE CS
  Ubie_methyltran 197 afPdqetlkeliedaGfksve 217
                      +f  ++ l+e+++daGf +++
       KHJ33295.1 255 NFNAAHLLEEMLRDAGFINIT 275
                      466667788888888887765 PP

>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   9.8e-05      0.16      46      82 ..     122     158 ..     104     177 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 9.8e-05
  Methyltransf_16  46 sklsvlELGsGtGlvGlavaellpeakviltDleell 82 
                      ++++vl++G GtG+  + +  l+p+a+++  Dl+ ++
       KHJ33295.1 122 NPQNVLDMGTGTGIWAIEMGDLYPSANILGVDLSPIQ 158
                      678*************************999988754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2623.03
//
Query:       KHJ33296.1  [L=517]
Description: putative s-adenosyl-l-methionine-dependent methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.1e-20   72.0   0.0    6.4e-20   71.3   0.0    1.2  1  Methyltransf_2   O-methyltransferase domain
      0.008   16.9   0.0      0.019   15.6   0.0    1.7  1  Methyltransf_25  Methyltransferase domain
  ------ inclusion threshold ------
      0.054   13.0   0.0       0.13   11.8   0.0    1.6  1  Sigma70_r4       Sigma-70, region 4


Domain annotation for each model (and alignments):
>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.3   0.0   1.1e-23   6.4e-20      65     207 ..     330     483 ..     315     486 .. 0.94

  Alignments for each domain:
  == domain 1  score: 71.3 bits;  conditional E-value: 1.1e-23
                     EEEEET-TTSHHHHHHHHH-TT-EEEEEE-HHHHHHHHHHS-----TTEEEEES-TTT.S-----SEEEEESSGGGS-HHHHHHHHHHHHHH--T CS
  Methyltransf_2  65 slvDvGGGtGalakaivsayPtikvivfDlpeVveaAkehlsageeervefvgGdffk.dslPeaDaillkrvlhDwsdekcvklLkrvkkalpa 158
                      +vD+GG  G +  a +s++P+++ iv D p  +++A    s ++++r++f+  df   +++  aD++++ ++ h +sd     +L+++  al++
      KHJ33296.1 330 LVVDIGGSHGFVSIALASKFPQLRFIVQDTPATIASASPL-SKDLSKRIQFQIHDFHTiQKVKGADVYFFRWIFHNHSDRLAIPMLRNLIPALKN 423
                     469**********************************997.9**************865899********************************* PP

                     T-EEEEEE----TTS---HHHHHH...........HHHHHHCSS-----HHHHHHHHHHC CS
  Methyltransf_2 159 gGkvivveavlgadpsgeletelv...........dlimlvqteGkeRteaeyeellsea 207
                     g +vi+ +  l++  s  +++  +           dl ml   + +eR+e+ey++l+++a
      KHJ33296.1 424 GARVIINDYCLPEPASMATKSSCIdpieekilrsmDLAMLSLLNSQERDETEYRMLFKSA 483
                     ************99999998888889999999999**********************987 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   3.2e-06     0.019       1      96 [.     331     424 ..     331     424 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.2e-06
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHHEE CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeeglnvefvqgdaedlpfedgsfDlvvssgalhhlsdedlekalkeiarvLk 94 
                      v+d+G  +G +++ala ++++ +++  D +++ ++ a    ++ + +++f+ +d+++++  +   D+ + +  +h  sd+ +  +l+++  +Lk
       KHJ33296.1 331 VVDIGGSHGFVSIALASKFPQLRFIVQD-TPATIASASPLSKDLSKRIQFQIHDFHTIQKVK-GADVYFFRWIFHNHSDRLAIPMLRNLIPALK 422
                      89*****************999999999.58889999999988888************9665.89**999766888888888899999999999 PP

                      EE CS
  Methyltransf_25  95 pg 96 
                      +g
       KHJ33296.1 423 NG 424
                      86 PP

>> Sigma70_r4  Sigma-70, region 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.2e-05      0.13      15      46 ..     175     208 ..     171     209 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.2e-05
                 HHH..TTT--HHHHHHHHTS-HHHHHHHHHHHHH CS
  Sigma70_r4  15 lrf..geglTleEIgerlgiSrerVrqiekrAlr 46 
                  +f   e  T+++I++r g+S+  Vr+ ++ A+ 
  KHJ33296.1 175 KSFpiHETATFAQISKRVGLSELNVRRFLRHAMT 208
                 566667889********************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3662.78
//
Query:       KHJ33297.1  [L=443]
Description: putative homoserine o-acetyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-43  148.5   0.0    4.2e-43  147.8   0.0    1.3  1  Abhydrolase_1  alpha/beta hydrolase fold
  ------ inclusion threshold ------
      0.016   14.8   0.0      0.028   14.1   0.0    1.4  1  Esterase       Putative esterase
      0.065   13.8   0.0      0.087   13.4   0.0    1.3  1  Abhydrolase_6  Alpha/beta hydrolase family


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.8   0.0     7e-47   4.2e-43       1     237 [.      70     404 ..      70     431 .. 0.90

  Alignments for each domain:
  == domain 1  score: 147.8 bits;  conditional E-value: 7e-47
                    SEEEEE-STTTCGGG..........GTTGHHHHH..HHHTTSEEEEEEETTSTTSSSTTTGB.........CHHSHHHHHHHHH...HHHHHCTTS CS
  Abhydrolase_1   1 pvlvilhGlpgssdv..........waerglapa..LakdgfdvillDlrGvgySspapacin........ddygtasvaddld...rildalgdd 73 
                    +v++++ Gl +ss+           w+e++++++  L+ d+++vi+ +++G +++s++p +i+        +++++ +++d+++   r+ld+lg++
     KHJ33297.1  70 NVILLHTGLSASSHAhsteknsqlgWWENFIGSGkcLDTDKYFVICSNVLGGCHGSTGPGSIDpsdgqryaTRFPILTIQDIVRaqfRLLDHLGVK 165
                    699********99999999*********999865116666********************************************96666******* PP

                    SEE.EEEETHHHHHHHHHHHHHGGGEEEEEEESE....CSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH CS
  Abhydrolase_1  74 klt.lvGhSmGGmialayaaeyperVkalvllga....idpaaslieaqrqqaksfpdffdgyaadcarnpagplladelaaleqrhrlvdalkfp 164
                    +l   vG SmGGm++la+  ++per+ ++v+++a     +++++++++qrq ++ +p++++g+++   +++ g++la+e a++++r+        p
     KHJ33297.1 166 RLFaSVGSSMGGMQSLAAGVLFPERIEKIVSISActrsQPYSIAIRHTQRQVLMMDPNWNRGFYYGSVPPHVGMKLAREIATITYRSG-------P 254
                    ****************************************************************************************.......* PP

                    CHHHCCHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHC...................................................... CS
  Abhydrolase_1 165 dkskrfpssgsdnasslatgalksieqwpttdsaklllrlre...................................................... 206
                    ++++rf +++ d+++ +a + ++ ie++ ++   k++l+++                                                       
     KHJ33297.1 255 EWEQRFGRMRADPQKPPALCPDFLIETYLDHSGEKFCLDYDAnsllylskamdlfdlggasyaqklvienkcyeqkkfglelpkssyqehlessmd 350
                    ******************************************999999999999999999999999999999999999999999999999999999 PP

                    ....................THHHHS....EEEEEEETTCSSSCH.HHHHHHHHC.H CS
  Abhydrolase_1 207 ....................lknvla....ptlvisgtsDplvpp.kaledlaql.l 237
                                        l    +    ++lvi+ +sD l+p  +++e  ++l l
     KHJ33297.1 351 knsvllnsrtrtppldvvraLE---SlkehNILVIGVESDILFPSwQQKEIVEALkL 404
                    9999999999999988844444...35559999999999999999888888877753 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   4.7e-06     0.028     102     149 ..     148     200 ..     134     258 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 4.7e-06
                 HHHHHHHHCSEECCC.....EEEEEETHHHHHHHHHHHCSTTTCCEEEEES-- CS
    Esterase 102 Llplldanfrtapdg.....ravaGqSmGGlgALilalkhpdrFgsvssfSpi 149
                 + ++++a+fr  +        a +G+SmGG+ +L +++  p+r   + s S+ 
  KHJ33297.1 148 IQDIVRAQFRLLDHLgvkrlFASVGSSMGGMQSLAAGVLFPERIEKIVSISAC 200
                 567788888888777777777889***************************55 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   1.4e-05     0.087      43     155 ..     144     267 ..      71     309 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.4e-05
                    CS--HHH.CHHHHHHHCCTT..TTSE.EEEEETCHHHHHHHHHHCC....EE.EEES-..----TTTS----TTHHHHHHTT-CCCCHCCH...S- CS
  Abhydrolase_6  43 ppldled.ladlaalldelaagggpv.vlvGHSlGGalalaaapla..lvvg.vlldppptalpagllaaalelllallallrllawlsre...pl 130
                    p l+ +d ++++ +lld+l+   ++    vG S+GG+ +laa+ l   ++++ v +++    ++    + a+++ ++       + w ++    ++
     KHJ33297.1 144 PILTIQDiVRAQFRLLDHLG--VKRLfASVGSSMGGMQSLAAGVLFpeRIEKiVSISA---CTRSQPYSIAIRHTQRQVLMMD-PNWNRGFyygSV 233
                    22444332233355888884..6666577********999966666884455666666...2222222222222222222222.344433333334 PP

                    HSCCCCHHH...C......CCCHCHCCCGHHHHC CS
  Abhydrolase_6 131 prlfladed...a......daawrarlarlaall 155
                    p++   +++   a       ++w +r+ r++a  
     KHJ33297.1 234 PPHVGMKLAreiAtityrsGPEWEQRFGRMRADP 267
                    4444333333231333445666666666666443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (443 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3139.55
//
Query:       KHJ33298.1  [L=406]
Description: putative solute carrier protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.2e-95  318.7  28.3    5.1e-95  318.4  28.3    1.0  1  SLC35F         Solute carrier family 35
    1.1e-08   34.4   6.0    1.1e-08   34.4   6.0    1.5  2  CRT-like       CRT-like, chloroquine-resistance transporter-l
     0.0041   17.3  38.8       0.15   12.2  12.7    2.4  2  EamA           EamA-like transporter family
  ------ inclusion threshold ------
      0.084   13.0   1.3       0.12   12.5   1.3    1.1  1  Tropomyosin_1  Tropomyosin like
       0.15   12.0   1.1       0.56   10.1   1.1    2.0  1  UPF0139        Uncharacterised protein family (UPF0139)
        1.4    7.9   0.0        1.4    7.9   0.0    2.9  3  FUSC-like      FUSC-like inner membrane protein yccS


Domain annotation for each model (and alignments):
>> SLC35F  Solute carrier family 35
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  318.4  28.3   1.7e-98   5.1e-95       2     298 ..      62     358 ..      61     359 .. 0.99

  Alignments for each domain:
  == domain 1  score: 318.4 bits;  conditional E-value: 1.7e-98
      SLC35F   2 tkkllislalGqvlsllitataltskylaekkinaPvlqtflnyvllalvytgillfrrgaeklleilkrkwykylllalvdveanylvvkayqytslt 100
                 t++++ +lalGqvl+l+it+t+++s+ l  +++++P++qt++ny+ l+++y+++++++ g+ k++ +l   ++ky +l+++dve+ny+ v ay+yt+l+
  KHJ33298.1  62 TRDFWLVLALGQVLALCITSTNTFSTLLVLHGTSIPTFQTLFNYIALIIIYATYTVYKYGFVKWFRLLVDDGWKYAILSFLDVEGNYFTVLAYRYTNLL 160
                 899************************************************************************************************ PP

      SLC35F 101 svqlldcfaipvvlvlswlflkvryrlvkiigvvvcilGvvllvvsdvlagrransgsnpvlGdllvlaGatlyavsnvleeylvkklslvellgllgl 199
                 s+ql++ +ai++v+++s  fl+vry++ +++g+++c  G+++l++sd ++g++++ +s +++Gdl+ l+Gat y++snv+ee++v+k + +e+lg+lgl
  KHJ33298.1 161 SAQLVNFWAIVCVVIISVTFLHVRYKWAQLSGIFICCSGMGILLISDHITGTNGGETSSKMKGDLFGLVGATFYGLSNVFEEWFVSKRPIYEVLGMLGL 259
                 *************************************************************************************************** PP

      SLC35F 200 fGaiisaiqlailerkelkaihWdaeiallfvgfalvlfllysllpilikktsatsvnlslltsdlyslliglflfhykvswlyllafvviliGlilys 298
                 fG ii ++  ai++r++ +   W+ eia + +gf+++l  +ysl+p++++++sa ++++sllt +++ ++igl lf+y +++ly++af++i+iGl++y 
  KHJ33298.1 260 FGVIINGVTAAIFDRQSFMIAVWNLEIAGYIAGFTISLTSFYSLAPLILRMASAVFFDISLLTGNFWGVIIGLNLFGYTIHYLYPIAFILIIIGLVVYF 358
                 **************************************************************************************************5 PP

>> CRT-like  CRT-like, chloroquine-resistance transporter-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   6.0   3.7e-12   1.1e-08      37     176 ..     101     244 ..      76     278 .. 0.83
   2 ?   -5.0   1.3       3.5   1.1e+04     322     334 .]     345     357 ..     337     357 .. 0.74

  Alignments for each domain:
  == domain 1  score: 34.4 bits;  conditional E-value: 3.7e-12
    CRT-like  37 tnfvyvpiffavvlykllltndipketrsfp.krkFaimgaLDavsgilvvigavstsGslqvllnqaiipitllasllllkerysliqylGAlviilg 134
                 t f y+ +  ++  y+++    + + +  +   +k+ai+++LD  + +++v++  +t     +l+n  +i+  +++s+ +l+ ry+++q+ G ++   g
  KHJ33298.1 101 TLFNYIALIIIYATYTVYKYGFVKWFRLLVDdGWKYAILSFLDVEGNYFTVLAYRYTNLLSAQLVNFWAIVCVVIISVTFLHVRYKWAQLSGIFICCSG 199
                 3455666666666777776666777777665259***************************************************************** PP

    CRT-like 135 vvvvlipsllgessegn...klvfnllllisviPvalSnvykeia 176
                 + ++li++ ++++++g+   k+  +l+ l+    + lSnv+ e  
  KHJ33298.1 200 MGILLISDHITGTNGGEtssKMKGDLFGLVGATFYGLSNVFEEWF 244
                 ******999998887643337777888888888888888887765 PP

  == domain 2  score: -5.0 bits;  conditional E-value: 3.5
    CRT-like 322 aglliillGlvlY 334
                 +++++i++Glv+Y
  KHJ33298.1 345 IAFILIIIGLVVY 357
                 5678888888888 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2  12.7   5.1e-05      0.15      25     136 ..      91     204 ..      66     206 .. 0.64
   2 !   10.9  18.1   0.00013      0.38       1     135 [.     221     357 ..     221     359 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.1e-05
        EamA  25 lrkvspltltfvrfliagillliiallkegkl....aklslkdwllllllgllgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltl 119
                 l+ +s  t+ ++   ia i+  +++ + +  +    + l   +w++ ++l++   v ++++ + a ++t+   a l+++ + v+++i+sv +l+ + ++
  KHJ33298.1  91 LHGTSIPTFQTLFNYIALIIIYATYTVYKYGFvkwfRLLVDDGWKY-AILSF-LDVEGNYFTVLAYRYTNLLSAQLVNFWAIVCVVIISVTFLHVRYKW 187
                 3333333322222224444444444444444443333344445666.55554.45667789999*********************************** PP

        EamA 120 kqllgivlillGvllil 136
                  ql gi+++  G  ++l
  KHJ33298.1 188 AQLSGIFICCSGMGILL 204
                 *******9998876654 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00013
        EamA   1 llgillallaalfwaiyfvlskillrkvspltltfvrfliagillliiallkegkl...aklslkdwllllllgllgtvlafllffyalkktsasnasl 96 
                 ++g+l+ l++a f++++ v+  ++++k + ++++++  l++ i+  ++a++++++    a+++l+   +++ +  ++ + +++l    l+  sa +  +
  KHJ33298.1 221 MKGDLFGLVGATFYGLSNVFEEWFVSKRPIYEVLGMLGLFGVIINGVTAAIFDRQSfmiAVWNLEIAGYIAGFT-ISLTSFYSLAPLILRMASAVFFDI 318
                 589*********************************************99999999877777776555544444.6888888999999*********** PP

        EamA  97 itslePvftlilsvlllgekltlkqllgivlillGvlli 135
                  +++   + +i++  l+g ++  +  ++++li++G+++ 
  KHJ33298.1 319 SLLTGNFWGVIIGLNLFGYTIHYLYPIAFILIIIGLVVY 357
                 ************************************986 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.3     4e-05      0.12      79     127 ..       8      56 ..       3      62 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4e-05
  Tropomyosin_1  79 trkiqlLEeeleesdkkLkettekLretdvkaeelERkvkaLeqerdew 127
                    tr   +L ee e+s+++ ++  +  +e ++++e +E   +aLe+++ +w
     KHJ33298.1   8 TRNFAVLNEENEQSSRSTNDPSTTTQEEEINSEVVEHGLEALENSKTAW 56 
                    678899****************************************999 PP

>> UPF0139  Uncharacterised protein family (UPF0139)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.1   0.00019      0.56      25      62 ..     162     200 ..     150     210 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00019
     UPF0139  25 dltpdymnllgm.ifsllglmlklkwcaWvalvcslisf 62 
                 ++ +++++++++ i+s++ l +++kw+   ++++++  +
  KHJ33298.1 162 AQLVNFWAIVCVvIISVTFLHVRYKWAQLSGIFICCSGM 200
                 5678899999962689999****************9765 PP

>> FUSC-like  FUSC-like inner membrane protein yccS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   1.4      0.83   2.5e+03      21      40 ..     162     181 ..     149     206 .. 0.55
   2 ?    7.9   0.0   0.00048       1.4      78     105 ..     227     254 ..     210     257 .. 0.90
   3 ?    2.5   0.9     0.022        65      14      45 ..     335     366 ..     326     370 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.83
   FUSC-like  21 pypwlfvlglllstflftml 40 
                 ++ + f++++ ++++++t l
  KHJ33298.1 162 AQLVNFWAIVCVVIISVTFL 181
                 55555555555544444433 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00048
   FUSC-like  78 lllGalwYgllsllwsllfpnrpvqqsL 105
                  l+Ga++Ygl +++  ++ ++rp+ + L
  KHJ33298.1 227 GLVGATFYGLSNVFEEWFVSKRPIYEVL 254
                 589********************99887 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.022
   FUSC-like  14 livqlllpypwlfvlglllstflftmlgalGq 45 
                 +  ++ + yp++f+l+++++ + f   g+lG+
  KHJ33298.1 335 FGYTIHYLYPIAFILIIIGLVVYFLSGGVLGE 366
                 56678899**********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1180  (0.0658152); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 2725.95
//
Query:       KHJ33299.1  [L=631]
Description: putative c6 transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.9e-24   84.1   0.3    1.4e-23   83.3   0.3    1.3  1  Fungal_trans  Fungal specific transcription factor domain
     0.0057   16.9   1.3      0.013   15.8   1.3    1.6  1  TSC22         TSC-22/dip/bun family
  ------ inclusion threshold ------
      0.052   13.4   2.8       0.62   10.0   0.2    2.4  2  Shugoshin_N   Shugoshin N-terminal coiled-coil region
       0.16   11.6   2.5       0.27   10.9   2.5    1.2  1  Lebercilin    Ciliary protein causing Leber congenital amauro


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.3   0.3   3.1e-27   1.4e-23       1     194 [.     114     294 ..     114     339 .. 0.82

  Alignments for each domain:
  == domain 1  score: 83.3 bits;  conditional E-value: 3.1e-27
  Fungal_trans   1 ldrffsnfhpqfpilhkpsflpkt....ssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwi 93 
                   l+++   +h  +pilh p+fl+++    +  +  ++      ll+++la+G+lf ++++++++++ ++    fi      + ++++++s+ ++ l +
    KHJ33299.1 114 LHSYYNSIHLVMPILHWPTFLNEYenvyKIGSFQNALPEWISLLYTVLAVGSLFNKEQAAQQTNKGRE----FI----DISLTQSDNWSDDFT-LDH 201
                   578888999999************98654444444444555677*****************9888887....55....555555666666666.999 PP

  Fungal_trans  94 lqsLlllelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcddd 190
                     +  l ++++     ++++ r++ +av++++++ L+ +  +++       + e  e+rrR+ww+++++D++i+l +Grpp+++d++i+++LP   +
    KHJ33299.1 202 ARAAILTSIFLVEINLKSAARRWLAIAVSISQEIDLQTEVGSWS------TS-E-LEMRRRVWWGVYIWDRQISLEYGRPPFIKDTDISVNLPTAAE 290
                   998888888888888888999**********************9......44.4.6*************************************9999 PP

  Fungal_trans 191 dlwe 194
                   d ++
    KHJ33299.1 291 DHQI 294
                   7665 PP

>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   1.3   2.9e-06     0.013      22      48 ..       6      32 ..       4      40 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 2.9e-06
       TSC22 22 kIkeLeernseleeENslLkalaspeq 48
                ++++Le++++++++ENs+L++++s++ 
  KHJ33299.1  6 QVQDLEKQIAQIKRENSYLRSIVSQQN 32
                899*******************99875 PP

>> Shugoshin_N  Shugoshin N-terminal coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.2   0.00014      0.62      22      44 ..       6      28 ..       5      29 .. 0.92
   2 ?    3.9   0.2     0.011        48       6      19 ..      29      42 ..      26      44 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00014
  Shugoshin_N 22 kirelekevseLlsENlnLReli 44
                 ++++lek ++++++EN  LR+ +
   KHJ33299.1  6 QVQDLEKQIAQIKRENSYLRSIV 28
                 69******************966 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.011
  Shugoshin_N  6 lrqNreLAKsNsal 19
                 ++qN+++ K N  +
   KHJ33299.1 29 SQQNKQICKENEGQ 42
                 79*********865 PP

>> Lebercilin  Ciliary protein causing Leber congenital amaurosis disease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   2.5     6e-05      0.27      19      59 ..       6      46 ..       3      49 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 6e-05
  Lebercilin 19 elaelqskleelrkEnklLkrlqkrqekaLskyedteaeLp 59
                ++++l+++++++++En  L+ +   q+k++ k ++ ++ L 
  KHJ33299.1  6 QVQDLEKQIAQIKRENSYLRSIVSQQNKQICKENEGQQALF 46
                89****************************98777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (631 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       778  (0.0433934); expected 358.6 (0.02)
Passed bias filter:                      625  (0.0348597); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.40
# Mc/sec: 4681.93
//
Query:       KHJ33300.1  [L=264]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       748  (0.0417201); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.21s 00:00:00.66 Elapsed: 00:00:00.36
# Mc/sec: 2198.26
//
Query:       KHJ33301.1  [L=90]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        1.6    8.6   6.6        2.9    7.8   6.6    1.7  1  zf-CCHC_6  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   6.6   0.00016       2.9       3      19 ..       7      22 ..       5      58 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00016
   zf-CCHC_6  3 KCknCGAFGHtarSkrC 19
                KC+nCG   H+  S+rC
  KHJ33301.1  7 KCRNCGG-PHRSDSRRC 22
                9*****9.5******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (90 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1023  (0.0570584); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 687.78
//
Query:       KHJ33302.1  [L=119]
Description: hypothetical protein EV44_g4794 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       302  (0.0168442); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.20s 00:00:00.57 Elapsed: 00:00:00.36
# Mc/sec: 987.19
//
Query:       KHJ33303.1  [L=345]
Description: hypothetical protein EV44_g1317 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2530.57
//
Query:       KHJ33304.1  [L=468]
Description: putative meiotic recombination protein ski8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-24   84.8  10.2    1.5e-07   32.0   0.5    7.5  7  WD40            WD domain, G-beta repeat
    4.1e-14   52.6   5.2    7.8e-14   51.7   5.2    1.4  1  Ribosomal_L32p  Ribosomal L32p protein family
    1.6e-13   50.7   1.1    0.00046   20.4   0.0    4.8  5  ANAPC4_WD40     Anaphase-promoting complex subunit 4 WD40 dom
    3.5e-05   22.9   0.1       0.36    9.8   0.0    3.2  3  Ge1_WD40        WD40 region of Ge1, enhancer of mRNA-decappin
    3.7e-05   23.7   0.0    0.00074   19.4   0.0    2.6  3  eIF2A           Eukaryotic translation initiation factor eIF2
    8.7e-05   21.2   0.1     0.0019   16.8   0.1    2.3  2  Cytochrom_D1    Cytochrome D1 heme domain
    0.00086   18.7   0.1        2.7    7.2   0.0    3.6  3  Nbas_N          Neuroblastoma-amplified sequence, N terminal
     0.0081   15.5   0.9      0.014   14.8   0.9    1.4  1  zf-ribbon_3     zinc-ribbon domain
     0.0085   15.1   0.1       0.17   10.8   0.1    2.4  2  PALB2_WD40      Partner and localizer of BRCA2 WD40 domain
  ------ inclusion threshold ------
      0.031   13.6   0.0        2.7    7.2   0.0    2.9  3  WD40_like       WD40-like domain
      0.034   13.8   0.4      0.057   13.0   0.4    1.3  1  CNH             CNH domain
      0.035   12.7   0.1       0.46    9.1   0.0    2.2  2  Nup160          Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.25   3.8e+02       8      28 ..     162     183 ..     154     191 .. 0.78
   2 !    9.6   0.2    0.0012       1.8       5      37 ..     201     235 ..     198     236 .. 0.77
   3 !   20.1   0.0   5.6e-07   0.00083      12      38 .]     264     291 ..     254     291 .. 0.86
   4 !   11.0   0.0   0.00043      0.65       4      38 .]     299     334 ..     296     334 .. 0.78
   5 !    8.2   0.0    0.0032       4.8      12      37 ..     350     375 ..     338     376 .. 0.79
   6 !   32.0   0.5   9.7e-11   1.5e-07       2      38 .]     381     418 ..     380     418 .. 0.91
   7 ?    0.2   0.0       1.1   1.6e+03       8      37 ..     426     462 ..     421     463 .. 0.51

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.25
                 ESS.SSEEEEEEETTSSEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasG 28 
                 ++H s++ sla+ p   + asG
  KHJ33304.1 162 DAHiSDIFSLAVTPKYILSASG 183
                 48*99*****999999887766 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.0012
                 EEEE.SSSS.EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   5 rtlt.GHss.vtslafspdgawlasGsdDgtvriW 37 
                 +tl+ +H+   +++a+s+dg+  +s++  g v++W
  KHJ33304.1 201 QTLSgAHKIgCHHIATSRDGRHAVSAGFGGEVKVW 235
                 566624432459999*******998888******* PP

  == domain 3  score: 20.1 bits;  conditional E-value: 5.6e-07
                 S.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 s.vtslafspdgawlasGsdDgtvriWd 38 
                 + ++++a s+dg+++as s+Dg + +Wd
  KHJ33304.1 264 GeIWAIAISDDGQYMASTSYDGRINVWD 291
                 149*************9999*******9 PP

  == domain 4  score: 11.0 bits;  conditional E-value: 0.00043
                 EEEEESSSSE.EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGHssv.tslafspdgawlasGsdDgtvriWd 38 
                 +r++++ +s   +l+ s+dg++ asG+++gtv++++
  KHJ33304.1 299 IREFETNGSFgMCLDLSRDGRLTASGHENGTVYVFN 334
                 566665533334999*******99*********987 PP

  == domain 5  score: 8.2 bits;  conditional E-value: 0.0032
                 SEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvriW 37 
                 +v+ +afsp+g+ la+++d g + ++
  KHJ33304.1 350 PVRTVAFSPHGTRLAAAGDAGIIALY 375
                 5999***********99966666555 PP

  == domain 6  score: 32.0 bits;  conditional E-value: 9.7e-11
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++  +tGH  ++ sl++s  g +l+sGs Dg+v++W+
  KHJ33304.1 381 EQVANFTGHsAWIFSLDWSYTGEYLLSGSSDGKVKVWS 418
                 67889****666****************99*******5 PP

  == domain 7  score: 0.2 bits;  conditional E-value: 1.1
                 ESS..SS..EEEEE....EETTSSEEEEEETTSEEEEE CS
        WD40   8 tGH..ss..vtsla....fspdgawlasGsdDgtvriW 37 
                 t+H  ++   +s++    + ++ +++++G   +++ ++
  KHJ33304.1 426 TTHgeTGktLWSVKwlpkTGRNERFVTAGA-SRSISLY 462
                 455432255899963333333334455555.7777765 PP

>> Ribosomal_L32p  Ribosomal L32p protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7   5.2   5.3e-17   7.8e-14       1      45 [.      92     138 ..      92     147 .. 0.93

  Alignments for each domain:
  == domain 1  score: 51.7 bits;  conditional E-value: 5.3e-17
                     S--SS---HHHHHHHGGG.T-----.-EEEETTTCCEECTTC-BTTT CS
  Ribosomal_L32p   1 AVPKrKtSksrrrkRrah.wklkap.nlvecpncgelklpHrvcpsc 45 
                     AVPK+KtS+s++r+R+ + ++lk   +l++c+ cg++k++H++cp+c
      KHJ33304.1  92 AVPKKKTSHSKKRSRQRAgKALKDVtALNKCSGCGHVKRSHVLCPYC 138
                     9**************88868*****9********************* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       7.8   1.2e+04      54      72 ..     179     197 ..     173     209 .. 0.77
   2 ?    5.9   0.1      0.01        16      34      70 ..     259     295 ..     229     307 .. 0.81
   3 !   10.8   0.0   0.00031      0.46      43      76 ..     311     344 ..     296     348 .. 0.88
   4 !   20.4   0.0   3.1e-07   0.00046      40      90 ..     350     399 ..     345     399 .. 0.94
   5 !   13.1   0.2   5.9e-05     0.089      41      77 ..     393     429 ..     387     442 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 7.8
  ANAPC4_WD40  54 avaysdgevrlldaesgkv 72 
                    a   +++++++ es+++
   KHJ33304.1 179 LSASGASAIKIYSTESADI 197
                  5566677899999998765 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.01
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrlldaesg 70 
                   +++ +e+ ++a + dg+ +a    dg++++ d   g
   KHJ33304.1 259 GENKAGEIWAIAISDDGQYMASTSYDGRINVWDLVAG 295
                  5788999***********************9998766 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 0.00031
  ANAPC4_WD40  43 sLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  +L  + dg+l a ++++g+v +++ e+g+++ sl
   KHJ33304.1 311 CLDLSRDGRLTASGHENGTVYVFNNETGRMIYSL 344
                  678899************************9887 PP

  == domain 4  score: 20.4 bits;  conditional E-value: 3.1e-07
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                   vr +a++p g+ La a + g + l+d+++g+ v +++ +s   + +l+W+
   KHJ33304.1 350 PVRTVAFSPHGTRLAAAGDAGIIALYDVKHGEQVANFTGHSA-WIFSLDWS 399
                  799**********************************99999.59999995 PP

  == domain 5  score: 13.1 bits;  conditional E-value: 5.9e-05
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlldaesgkvvhsls 77 
                  + sL W+  g+ L  + sdg+v++ ++ +  +v +  
   KHJ33304.1 393 IFSLDWSYTGEYLLSGSSDGKVKVWSIDQRSCVTTHG 429
                  779*************************999987654 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0   0.00024      0.36     146     216 ..     223     292 ..     139     301 .. 0.78
   2 !    8.5   0.0   0.00059      0.88     190     220 ..     351     381 ..     307     392 .. 0.73
   3 ?    0.9   0.1      0.11   1.7e+02     190     220 ..     393     423 ..     381     447 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00024
    Ge1_WD40 146 llvltrgdkaeiwsvdmiaskygsgelsveeieegllkieehs.liveaafspdGtalatasedGevkffqv 216
                  +    g ++++w ++ i++k ++g    e +eeg +  e+++ +i   a+s dG  +a +s dG +  + +
  KHJ33304.1 223 AVSAGFGGEVKVWRLSKIENKGENG--GEEWVEEGSILGENKAgEIWAIAISDDGQYMASTSYDGRINVWDL 292
                 5555567788999999998876665..456788899888888779**********************99976 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00059
    Ge1_WD40 190 iveaafspdGtalatasedGevkffqvyled 220
                 + + afsp Gt la+a   G++ ++ v   +
  KHJ33304.1 351 VRTVAFSPHGTRLAAAGDAGIIALYDVKHGE 381
                 77889********************997655 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.11
    Ge1_WD40 190 iveaafspdGtalatasedGevkffqvyled 220
                 i +  +s  G  l   s+dG+vk + + +  
  KHJ33304.1 393 IFSLDWSYTGEYLLSGSSDGKVKVWSIDQRS 423
                 5555566667777777777777777765443 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.4   2.1e+03     106     136 ..     214     241 ..     186     256 .. 0.80
   2 ?    0.4   0.0      0.35   5.2e+02     123     146 ..     283     307 ..     252     323 .. 0.73
   3 !   19.4   0.0     5e-07   0.00074      79     169 ..     324     416 ..     320     422 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.4
                 EEE-TTSSEEEEE-TTSSS-EEEEEETTTTE CS
       eIF2A 106 iffspkgklvllaGfgnlaGeleiwdvkkkk 136
                 i  s  g+  + aGfg   Ge+++w  +k++
  KHJ33304.1 214 IATSRDGRHAVSAGFG---GEVKVWRLSKIE 241
                 5667788888999998...788888877665 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.35
                 SS-EEEEEETT.TTEEEEEEE-TT- CS
       eIF2A 123 laGeleiwdvk.kkkkiakaeaana 146
                   G++++wd    +kki ++e   +
  KHJ33304.1 283 YDGRINVWDLVaGRKKIREFETNGS 307
                 4799*****9988999999887654 PP

  == domain 3  score: 19.4 bits;  conditional E-value: 5e-07
                 SSSSCEEEEEECS.CEEEEEEEE..ES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT-..-EEEE-TTSSEEEEEE-TTT-SS CS
       eIF2A  79 Gkmpakvslfdlk.vkvisklee..qkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaana..tlvewspdgryvlTattaprlrv 169
                 G+ + +v++f+++ +++i++l    ++  t+ fsp+g+ ++ aG    aG ++++dvk+ +++a++    a   +++ws++g+y+l  ++  +++v
  KHJ33304.1 324 GHENGTVYVFNNEtGRMIYSLPGlvRPVRTVAFSPHGTRLAAAGD---AGIIALYDVKHGEQVANFTGHSAwiFSLDWSYTGEYLLSGSSDGKVKV 416
                 77788899999855999999985337889**********999985...377************9987555411678**********9888777665 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   1.3e-06    0.0019      43     202 ..     271     421 ..     265     434 .. 0.72
   2 !    4.2   0.0    0.0085        13      13      66 ..     368     421 ..     362     455 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.3e-06
                   -TT.SSEEEEEETTSEEEEEESSSSS.EEEEEE.-SSEEEEEEE--TTSEEEEEEEETTEEEEEETTT--EEEEEE--EE-SSSS---EEEEEE-SS CS
  Cytochrom_D1  43 fasdgRyvyvigRDgkvtliDLwake.ivaevk.iGlnarsvavSqddryvivgnYlPgqlvildaetLelvkvisargltvderesRVaaivaspe 137
                    + dg y+   + Dg++++ DL a + +++e +  G+    ++ S d+r+++ g  + g++ +++ et  ++  ++     v     R +a  + ++
    KHJ33304.1 271 ISDDGQYMASTSYDGRINVWDLVAGRkKIREFEtNGSFGMCLDLSRDGRLTASG-HENGTVYVFNNETGRMIYSLPGLVRPV-----RTVAF-SPHG 360
                   6899*******************988777887526999************9887.689**********99999888766555.....55543.3333 PP

                   SSEEEEEETTTTEEEEEE-SSSSSEEEEEEE--SSEEEEEE-TTSSEEEEEEGGGTEEEEEETTT CS
  Cytochrom_D1 138 rpefvvnlkdtgeillvdysdlknlktrtieaakflhDggldpdkRYflaaanaedkvavvdtke 202
                    +  + +  d+g i l d + +++++ ++ +   ++    +++++ Y+l++  ++ kv+v+  ++
    KHJ33304.1 361 TR--LAAAGDAGIIALYDVKHGEQVA-NFTGHSAWIFSLDWSYTGEYLLSGS-SDGKVKVWSIDQ 421
                   33..6777777777777777776654.4455555666677777777777743.233666655544 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0085
                   GGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEESSS CS
  Cytochrom_D1  13 dagkvalldgdskeilavletgyalHisrvfasdgRyvyvigRDgkvtliDLwa 66 
                   dag +al d ++ e++a++ ++ a   s   +  g y++  + Dgkv++  + +
    KHJ33304.1 368 DAGIIALYDVKHGEQVANFTGHSAWIFSLDWSYTGEYLLSGSSDGKVKVWSIDQ 421
                   89999***************************99************99876655 PP

>> Nbas_N  Neuroblastoma-amplified sequence, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.014        22     225     270 ..     204     249 ..     171     257 .. 0.86
   2 !    7.2   0.0    0.0018       2.7     231     264 ..     265     298 ..     255     310 .. 0.80
   3 ?    2.1   0.0     0.065        96     234     265 ..     353     384 ..     349     394 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.014
      Nbas_N 225 kaeekdgvfkmslspdgtllavihfsgklsiwdipslkqrgeweqe 270
                  +  k g  +++ s dg       f g++ +w +  ++++ge   e
  KHJ33304.1 204 SGAHKIGCHHIATSRDGRHAVSAGFGGEVKVWRLSKIENKGENGGE 249
                 4667889999***************************999987655 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0018
      Nbas_N 231 gvfkmslspdgtllavihfsgklsiwdipslkqr 264
                  ++ +++s dg  +a   + g++++wd+ + +++
  KHJ33304.1 265 EIWAIAISDDGQYMASTSYDGRINVWDLVAGRKK 298
                 48899**********************8765554 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.065
      Nbas_N 234 kmslspdgtllavihfsgklsiwdipslkqrg 265
                  +++sp gt+la+   +g ++++d+   +q +
  KHJ33304.1 353 TVAFSPHGTRLAAAGDAGIIALYDVKHGEQVA 384
                 46789999999999999999999987665555 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.9   9.3e-06     0.014       3      22 ..     120     138 ..     118     142 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 9.3e-06
  zf-ribbon_3   3 vrCPnCGaplssddnvCpyC 22 
                  ++C+ CG++ + + + CpyC
   KHJ33304.1 120 NKCSGCGHV-KRSHVLCPYC 138
                  58*******.********** PP

>> PALB2_WD40  Partner and localizer of BRCA2 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.065        97     295     350 ..     278     333 ..     258     334 .. 0.72
   2 !   10.8   0.1   0.00012      0.17     294     350 ..     362     417 ..     336     418 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.065
  PALB2_WD40 295 aaavltsGaiavWdlllghctalllpesdesWslvrWsgtdsqlla.GqkdGsvlvy 350
                  a+    G i vWdl+ g+ + +   e++ s+ +    + d +l a G+++G+v+v+
  KHJ33304.1 278 MASTSYDGRINVWDLVAGRKK-IREFETNGSFGMCLDLSRDGRLTAsGHENGTVYVF 333
                 566666799********9985.44556666666665555555555438999999997 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00012
  PALB2_WD40 294 laaavltsGaiavWdlllghctalllpesdesWslvrWsgtdsqllaGqkdGsvlvy 350
                   aa   +G ia++d+  g+  a ++ +s   +sl  Ws t   ll+G  dG+v v+
  KHJ33304.1 362 RLAAAGDAGIIALYDVKHGEQVANFTGHSAWIFSL-DWSYTGEYLLSGSSDGKVKVW 417
                 56777889*************99999988777775.8*****************997 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.34   5.2e+02       2      31 ..     265     294 ..     264     304 .. 0.85
   2 ?    7.2   0.0    0.0018       2.7       6     112 ..     312     421 ..     309     430 .. 0.62
   3 ?    5.7   0.0    0.0054       8.1       3      37 ..     393     427 ..     391     443 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.34
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlkles 31 
                 ei++i is +g++++  + d ++ v +l  
  KHJ33304.1 265 EIWAIAISDDGQYMASTSYDGRINVWDLVA 294
                 89*************999999999988765 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0018
   WD40_like   6 idiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldddlilvvtlD.Gtillslleneeevenekieed.istv..kviddklliGtn 100
                 +d+s++g l + G ++ ++ v++ e++ +++++ ++   v  v +      l ++ D G i l++++++e+v n   + + i     +++++ ll G++
  KHJ33304.1 312 LDLSRDGRLTASGHENGTVYVFNNETGRMIYSLPGLVRPVRTVAFSPHGTRLAAAGDaGIIALYDVKHGEQVANFTGHSAwIFSLdwSYTGEYLLSGSS 410
                 577777777777777777777777777777777777777777777777766666666566777777777766665544441333222466667777777 PP

   WD40_like 101 kGsiyvfskdlq 112
                  G++ v+s d q
  KHJ33304.1 411 DGKVKVWSID-Q 421
                 7777777666.2 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.0054
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsi 37 
                 i+s+d s  g+++l G+ d k++v ++++   v+ 
  KHJ33304.1 393 IFSLDWSYTGEYLLSGSSDGKVKVWSIDQRSCVTT 427
                 89**************************9998886 PP

>> CNH  CNH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.4   3.8e-05     0.057      33     169 ..      59     197 ..      44     224 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.8e-05
         CNH  33 eklssvtqlaVleelnlllllsd..kqLyvydlsaLeekeeesqlakkksenltqklpetkgchffairngyskekfLvvavkskivllewneplkkfk 129
                  +l +++ l +l  ln+ +++ +  + L+   l+a+ +k+++  ++k+ ++++ + l+++   +++++  + +++ +L+ ++ + ++l  ++ + k++ 
  KHJ33304.1  59 QHLRKFQNLRLLS-LNISVSVNKwfCDLWESILRAVPKKKTSH-SKKRSRQRAGKALKDVTALNKCSGCGHVKRSHVLCPYCVKVLELTDPYLKSKQY- 154
                 5566678888888.89999998899999999999999999665.4555566688888888888888888899********************988888. PP

         CNH 130 kklrefqvp..aevfsisvl.kpklcvgvakgFelvnldegaa 169
                  ++ +++    + +fs++v+ k+ l  + a+ +++++ ++++ 
  KHJ33304.1 155 LSYHTIDDAhiSDIFSLAVTpKYILSASGASAIKIYSTESADI 197
                 88888888889*********66666655599999998887665 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.068     1e+02      34      62 ..     272     300 ..     229     325 .. 0.84
   2 ?    9.1   0.0   0.00031      0.46     231     258 ..     403     431 ..     377     454 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.068
                 TCEESSEEEEESSSSEEEEEE.EETTEEE CS
      Nup160  34 tagvvyfrksnsynrfilWrvltdgktLe 62 
                 ++++ y  ++++++r+  W++++++k++ 
  KHJ33304.1 272 SDDGQYMASTSYDGRINVWDLVAGRKKIR 300
                 46667777888888888888888888876 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00031
                 TEEEEEETT-EEEEEETTTTEEEEE.EE- CS
      Nup160 231 tylfalsrdgkLrvWnlltgkclat.idl 258
                  yl++ s+dgk++vW+++  +c+ t +++
  KHJ33304.1 403 EYLLSGSSDGKVKVWSIDQRSCVTThGET 431
                 689999*****************996665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 3042.39
//
Query:       KHJ33305.1  [L=159]
Description: putative dynein light chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-32  111.9   0.1    2.2e-32  111.3   0.1    1.2  1  Tctex-1   Tctex-1 family


Domain annotation for each model (and alignments):
>> Tctex-1  Tctex-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.3   0.1   1.2e-36   2.2e-32       8     103 .]       8     158 ..       6     158 .. 0.95

  Alignments for each domain:
  == domain 1  score: 111.3 bits;  conditional E-value: 1.2e-36
                 HHHHHHHCTSSS--CCCHHHHHHHHHHHHHHHHHHHTS.SS....SCEEEEEEEEEETTTS...................................... CS
     Tctex-1   8 ealesalesaesYdhekveqwnstiinsilkalksestele..lpryKfivnvtivqkkgq...................................... 66 
                  a++ al+++e Y+h+k+e+wn+tiinsil++l+ses++++   p++K++vn+ti+q                                          
  KHJ33305.1   8 SACNLALGETEYYEHSKTESWNTTIINSILRSLISESSSSTggGPSFKYTVNSTIIQ---Ylvptsaiqrakaiqetstpksqraeattstsatntntk 103
                 69**********************************7766678**************...4445899******************************** PP

                 ...............-EEEEEEEES-TTT-EEEEEEE...CTTSEEEEEEEEEEE CS
     Tctex-1  67 ...............gmhsasgaywdektDgmvsfky...enkgldvvvtvfwva 103
                                gmhsa+gayw+ektDgm+sfky   ++kgldv+++++w+a
  KHJ33305.1 104 neatgtdgrphvgrrGMHSATGAYWNEKTDGMWSFKYeggDSKGLDVIISIVWIA 158
                 *************************************9999************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1008  (0.0562218); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1268.63
//
Query:       KHJ33306.1  [L=343]
Description: putative cell division control protein 10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   4.8e-112  373.8   0.3   5.7e-112  373.6   0.3    1.0  1  Septin        Septin
    6.6e-08   32.6   0.0    1.5e-07   31.5   0.0    1.6  1  MMR_HSR1      50S ribosome-binding GTPase
    2.3e-06   27.1   0.0    3.9e-06   26.3   0.0    1.4  1  AIG1          AIG1 family
    3.7e-05   23.7   0.2    0.00036   20.5   0.0    2.2  2  RsgA_GTPase   RsgA GTPase
    0.00026   21.1   0.5       0.69    9.9   0.2    2.5  2  Dynamin_N     Dynamin family
    0.00034   20.2   0.6      0.013   15.1   0.1    2.4  2  GTP_EFTU      Elongation factor Tu GTP binding domain
      0.005   17.1   0.0       0.01   16.1   0.0    1.6  1  AAA_22        AAA domain
     0.0051   17.2   0.0      0.013   15.9   0.0    1.9  1  AAA_16        AAA ATPase domain
     0.0086   15.3   0.1      0.015   14.5   0.1    1.3  1  NB-ARC        NB-ARC domain
  ------ inclusion threshold ------
       0.01   15.3   0.1      0.049   13.1   0.0    2.0  2  AAA_7         P-loop containing dynein motor region
      0.015   15.8   0.9      0.026   15.1   0.9    1.8  1  ABC_tran      ABC transporter
      0.027   13.7   1.0      0.073   12.2   1.0    1.9  1  G-alpha       G-protein alpha subunit
      0.043   13.8   0.3       0.33   10.9   0.0    2.2  2  Microtub_bd   Microtubule binding
       0.05   13.8   0.0       0.11   12.8   0.0    1.5  1  Roc           Ras of Complex, Roc, domain of DAPkinase
      0.055   12.5   0.0        0.1   11.7   0.0    1.4  1  T2SSE         Type II/IV secretion system protein
      0.064   12.6   0.0       0.15   11.4   0.0    1.5  1  FtsK_SpoIIIE  FtsK/SpoIIIE family
       0.09   13.3   0.2       0.17   12.3   0.2    1.5  1  AAA_23        AAA domain


Domain annotation for each model (and alignments):
>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  373.6   0.3  5.4e-115  5.7e-112       1     277 [.      36     311 ..      36     315 .. 0.98

  Alignments for each domain:
  == domain 1  score: 373.6 bits;  conditional E-value: 5.4e-115
                 XEEEEEEEEEEBTTSSCCCCCCTTSSSS------------------S-EEEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHHHHHHHHHHH CS
      Septin   1 kgieftlmvvGesglGkttlintlfetdlieeekleeasekkkktveikkkkvvieedgvklnltviDtpgfGdavdnskswepiveyideqfeeylre 99 
                 +g++f++++vG+ glGk+tlint+f+++li+++   ++ e  ++t+ei++ +++iee+gv+l+l+++Dtpg+Gd+v+n+++w+piv+yi++q+++ylr+
  KHJ33306.1  36 RGFQFNIICVGQTGLGKSTLINTIFASHLIDSKGRLTPDEPVRSTTEIQTVSHIIEENGVRLRLNIVDTPGYGDQVNNDRCWDPIVKYIKDQHSAYLRK 134
                 69************************************************************************************************* PP

                 CTSS--.SS-----EEEEEEEE-TTSSSS-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT--------SSSS-SCCHHHHHHH CS
      Septin 100 esklkR.kkivDkRvHaclyfisPtghglkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeikiyklpdeeededeeakelsek 197
                 e +++R + i+D+R+H+cl+fi+P+gh lkp+d+ ++kkls+ vn++PviaK+D+lt eE ++fK++i+ee++ +++ki+  +d +e +dee + l+ +
  KHJ33306.1 135 ELTAQReRYIQDTRIHCCLFFIQPSGHALKPIDIVVLKKLSDVVNVVPVIAKSDSLTLEEQSAFKERIKEEFAFHNLKIFP-YDNDEFDDEE-RALNAQ 231
                 ******8889***********************************************************************.9*99999999.99**** PP

                 HHHC-SEEB-SSSSEEEESSSEEEEEEETTEEEETT-TTT-SCCHHHHHHHHHCHHHHHHHHHHTHHHHHHHHHH-XXXX CS
      Septin 198 lkeslPfaivgsneliekkgkkvrgRkypWGvvevenekhsdFlkLrklllkthledLkevteellYetyRseklsklke 277
                 +k+ +Pfa+vgs++ i   gk+vrgR+ +WGv++ve+e+h++F+ Lr++l++thl+dL+e+t++++Yet+R++ l +lke
  KHJ33306.1 232 IKNIIPFAVVGSENSIIVGGKQVRGRQNRWGVINVEDENHCEFVYLRNFLTRTHLQDLIETTSQIHYETFRAKSLLALKE 311
                 **************************************************************************998876 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   1.4e-10   1.5e-07       2     101 ..      42     174 ..      41     190 .. 0.53

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 1.4e-10
                 EEEEESTTSSHHHHHHHHHT.....STE.EESSST.TSSSSEEEEE..EEETT..EEEEEEECGGC................SS...HHHHHH...HHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltg.....eka.ivsdkp.gtTrdinegr..vklkg..keielvDtpGl................ie...gaseek...glg 67 
                 +++vG++  GKStLin+++      +k   + d+p   T++i++    ++++g   ++++vDtpG                 i+   +a  +k     +
  KHJ33306.1  42 IICVGQTGLGKSTLINTIFAshlidSKGrLTPDEPvRSTTEIQTVShiIEENGvrLRLNIVDTPGYgdqvnndrcwdpivkyIKdqhSAYLRKeltAQR 140
                 899***************9833332222133333333444443332113333333569*******5555555555555444322111222222112233 PP

                 HHHHHHHCTSEEEEEEETTTTCSHHHHHHHHHHH CS
    MMR_HSR1  68 kaflaleeadlillvvdaseeklkpldeeleell 101
                 +++ +  + +  l+ ++ s + lkp+d  + + l
  KHJ33306.1 141 ERYIQDTRIHCCLFFIQPSGHALKPIDIVVLKKL 174
                 3333344567777777655556777776666655 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.0   3.7e-09   3.9e-06       2      68 ..      41     115 ..      40     132 .. 0.74

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 3.7e-09
                 EEEEESSTTSSHHHHHHHHHTS--SS--TTTS...--..-SS-EEEEE..EETT..EEEEEEE--SCCCTTCCHHC CS
        AIG1   2 tivlvGktgnGkSaTgNsilgkkaFesklsaq...sv..tkkcqkksr..twdg..kkinViDTPglfdlsvsadk 68 
                 +i+ vG+tg GkS+ +N+i  ++  +sk + +   +v  t++ q++s   +++g   ++n++DTPg  d  v++d+
  KHJ33306.1  41 NIICVGQTGLGKSTLINTIFASHLIDSKGRLTpdePVrsTTEIQTVSHiiEENGvrLRLNIVDTPGYGDQ-VNNDR 115
                 89**************************8754222453377888888853444455679*******8764.44444 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   3.4e-07   0.00036     101     160 ..      41     106 ..      15     110 .. 0.71
   2 ?    0.6   0.0      0.43   4.6e+02      44      85 ..     175     219 ..     159     243 .. 0.63

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 3.4e-07
                  EEEEECSTTSSHHHHHHHHCTT-----S--------------SEEEEEETT.TEE.....EESS-S CS
  RsgA_GTPase 101 tsvlvGqSGvGKStLinallpelelktgevseklgrGkhTTtavellelae.ggl.....liDtPG 160
                   ++ vGq+G GKStLin++  ++ +  +   + ++  + TT  +++ ++ e +g+     ++DtPG
   KHJ33306.1  41 NIICVGQTGLGKSTLINTIFASHLIDSKGRLTPDEPVRSTTEIQTVSHIIEeNGVrlrlnIVDTPG 106
                  35679**************99877777776777788888888777766544344333333889998 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.43
                  HTT-EEEEEEE-GGG--HHH...HHHHHHHHHHHTTSEEEE--TT CS
  RsgA_GTPase  44 ekgiepvivlnKiDlleeee...eleelkeelealgyevllvsak 85 
                  +  +++v v+ K D l+ ee     e++kee++  +++++  +++
   KHJ33306.1 175 SDVVNVVPVIAKSDSLTLEEqsaFKERIKEEFAFHNLKIFPYDND 219
                  4557888899****9998884433444555555556666655444 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.2   0.00066      0.69       1      28 [.      42      68 ..      42      88 .. 0.80
   2 !    8.9   0.0    0.0014       1.5     100     129 ..      96     128 ..      75     133 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00066
                EEEEEBTTTTHHHHHHHHHTS--S---S CS
   Dynamin_N  1 iavvGsqSsGKSSvlnaLlgedilprgp 28
                i+ vG++  GKS+++n +  +++   ++
  KHJ33306.1 42 IICVGQTGLGKSTLINTIFASHL-IDSK 68
                788***************99984.4444 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0014
                 S-SEEEEE---B-SSSGTTS..HHHHHHH.STT CS
   Dynamin_N 100 vkgltlvDlPGldsvnkrdq..elvkeyi.kka 129
                 + +l++vD+PG+ ++ ++d   + + +yi +++
  KHJ33306.1  96 RLRLNIVDTPGYGDQVNNDRcwDPIVKYIkDQH 128
                 67899*******998888888999999995444 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   1.2e-05     0.013       5      82 ..      41     109 ..      39     114 .. 0.75
   2 ?    3.2   0.1     0.053        56     121     165 ..     176     219 ..     164     297 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.2e-05
                 EEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEE.TTCSSEEEEEEEESSSGG CS
    GTP_EFTU   5 nigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisle.ketkkylinliDtPGHvd 82 
                 ni+ +g +  GK+TL+ ++ +++ ++sk g           +++E  r  T   ++ ++  +++ + ++n++DtPG  d
  KHJ33306.1  41 NIICVGQTGLGKSTLINTIFASHLIDSK-G---------RLTPDEPVRSTTEIQTVSHIIeENGVRLRLNIVDTPGYGD 109
                 9999****************88777776.2.........2467788887774333333332589999*********877 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.053
                 TTTEEEEEEESCGST.HHHHHHHHHHHHHHHHHHHHHHHHHHHTTT CS
    GTP_EFTU 121 egvpiivfiNKmDrl.kaelkeiveevkqklsrkeeklekygekge 165
                   v+++ +i K D l  +e +  +e +k+++    ++l+ ++++++
  KHJ33306.1 176 DVVNVVPVIAKSDSLtLEEQSAFKERIKEEFAF--HNLKIFPYDND 219
                 55889**********766677777888888833..33333444433 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   9.5e-06      0.01       8      37 ..      42      71 ..      39     157 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 9.5e-06
      AAA_22  8 lvvtGesGtGKTtllrrlleqldeeakaee 37
                ++++G++G GK+tl+++++ ++ +++k + 
  KHJ33306.1 42 IICVGQTGLGKSTLINTIFASHLIDSKGRL 71
                89*****************99977655544 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.2e-05     0.013      25      63 ..      40      79 ..      20     249 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.2e-05
      AAA_16 25 elvllsGesGvGKsslvrellralekd.ggiflrgkcdql 63
                 +++++G+ G GKs+l+++++ +   d +g ++  + +++
  KHJ33306.1 40 FNIICVGQTGLGKSTLINTIFASHLIDsKGRLTPDEPVRS 79
                4789**************9998554441455555555555 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.1   1.5e-05     0.015       6      43 ..      27      62 ..      23      69 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.5e-05
                HHHHHHHHCTTTSCSEEEEEEESTTSSHHHHHHHHCCS CS
      NB-ARC  6 ekviekLlekdelqslvvalvGmgGvGKttlakqilnk 43
                 ++  kLl k ++q + +  vG  G+GK+tl++ i+ +
  KHJ33306.1 27 SQIERKLL-KRGFQ-FNIICVGQTGLGKSTLINTIFAS 62
                57889999.99999.889999**************987 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   4.6e-05     0.049      33      84 ..      39      92 ..      25     112 .. 0.75
   2 ?   -0.8   0.0      0.89   9.4e+02     126     155 ..     121     153 ..     115     167 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.6e-05
       AAA_7 33 kkpvllvGptGtGKtviikd.llkkld.kekylsltinfsaqtsanqlqdiies 84
                + ++++vG+tG GK+++i++ + ++l  ++  l+    + ++t+ +++ +iie+
  KHJ33306.1 39 QFNIICVGQTGLGKSTLINTiFASHLIdSKGRLTPDEPVRSTTEIQTVSHIIEE 92
                46899***************7666654155555556666666666666666665 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.89
       AAA_7 126 lRqlldyggwYdrkklefk...eikdvqlvaam 155
                 ++ + d++  Y rk+l+ +   +i+d+ + ++ 
  KHJ33306.1 121 VKYIKDQHSAYLRKELTAQrerYIQDTRIHCCL 153
                 677789999999999855433379999998885 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.9   2.4e-05     0.026      16      50 ..      44      78 ..      39     339 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2.4e-05
                EEESTTSSHHHHHHHHT.TSS--SEEEEEETTCEGG CS
                xxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx RF
    ABC_tran 16 ivGenGaGKStLlklla.gllkpteGeilldgkdlk 50
                 vG++G GKStL++++   +l + +G+++ d ++++
  KHJ33306.1 44 CVGQTGLGKSTLINTIFaSHLIDSKGRLTPD-EPVR 78
                59************98615566788888444.3333 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.0     7e-05     0.073      11      76 ..      29     103 ..      21     301 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 7e-05
                 XXXXXXXXXE..EEEEEEEESTTSSHHHHHHHHH...HHCS--........--HHHHHCCHHHHHHHHHHHHHHHHH CS
     G-alpha  11 lkaerkarkkkrevkllllGqseSGKsTilkqlk...llykkg........fseeelatwraviqlnivrsiktile 76 
                 +  erk  k+ ++++++++Gq + GKsT+++ +    l+  kg         s+ e++t   +i +n vr   +i++
  KHJ33306.1  29 I--ERKLLKRGFQFNIICVGQTGLGKSTLINTIFashLIDSKGrltpdepvRSTTEIQTVSHIIEENGVRLRLNIVD 103
                 3..34556667899*****************9974434444447766666555556677777777777774444443 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00032      0.33      74      98 ..      29      54 ..      18      75 .. 0.81
   2 ?    0.3   0.1      0.57     6e+02      47      91 ..     201     252 ..     175     302 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00032
                 HHHHHH.TT--EEEEEEES....... CS
  Microtub_bd 74 lvqsal.dgynvcifaygqTGsGKty 98
                 +    l +g +++i+++gqTG GK+ 
   KHJ33306.1 29 IERKLLkRGFQFNIICVGQTGLGKST 54
                 4455567899**************84 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.57
                  TTTEEEE-S..EEEECTT.....HCCCCCCCCHHHHHHHHTT--EEEEEEES CS
  Microtub_bd  47 kkkkefsFd..rvfeses.....eqeevfeeisqlvqsaldgynvcifaygq 91 
                  + k+ef F   ++f+ ++     e+  +  +i+ ++  a+ g++ +i+  g+
   KHJ33306.1 201 RIKEEFAFHnlKIFPYDNdefddEERALNAQIKNIIPFAVVGSENSIIVGGK 252
                  4455555543377877766666677788888889999999888888888776 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0    0.0001      0.11       2      65 ..      42     106 ..      41     117 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.0001
                 EEEESSTTSSHHHHHHCHCT-CCC-EE.ETTTTEEEEE.EECGGSGGCTTBTTTTCEEEEEEEE-S CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfseke.kstigvdflt.kevtkikgvendkkvkkvklniWDtaG 65 
                 +++vG++g GK++l++ +  ++  +++ + t    + + +e+++++++ + ++  +++lni Dt G
  KHJ33306.1  42 IICVGQTGLGKSTLINTIFASHLIDSKgRLTPDEPVRStTEIQTVSHIIE-ENGVRLRLNIVDTPG 106
                 899*************9888777555404555444433244555555544.445569999999987 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   9.5e-05       0.1     115     151 ..      27      61 ..       7      95 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 9.5e-05
       T2SSE 115 kekiaevlrkavrerglilvsGgTgsGKttllyallk 151
                 ++  +++l++    + +i+  G Tg GK+tl++++ +
  KHJ33306.1  27 SQIERKLLKRG--FQFNIICVGQTGLGKSTLINTIFA 61 
                 44444555555..799*****************9864 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00014      0.15      40      64 ..      40      64 ..      12      69 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00014
                  .SEEEE--TTSSHHHHHHHHHHHHH CS
  FtsK_SpoIIIE 40 shllvaGatgsGKStalntLilSla 64
                   +++ +G tg GKSt +nt+ +S +
    KHJ33306.1 40 FNIICVGQTGLGKSTLINTIFASHL 64
                  699*****************99966 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   0.00017      0.17      25     175 ..      45     205 ..      28     237 .. 0.53

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00017
      AAA_23  25 tGpNGaGKTTildAikla.Lygetprlsrks..grgfeksdveiese...gkvkay.veltfenkdgrytrsiererelskkkgkttkkaklelleide 116
                 +G++G GK+T+++ i    L   ++rl +++  +     s  ei++     + +++ ++l++ ++ g   +  + +  + ++  +++ k++ +    +e
  KHJ33306.1  45 VGQTGLGKSTLINTIFAShLIDSKGRLTPDEpvR-----STTEIQTVshiIEENGVrLRLNIVDTPG---YGDQVNNDRCWDPIVKYIKDQHSAYLRKE 135
                 6**************9975899999888866331.....3333333311122222224444333333...44445556666666666666666666667 PP

      AAA_23 117 leqfisellgskkiilnlilflgqer.........feefelkdkke.......rleelekeleeledekkllekl 175
                 l+ + +++++ + i   l+++++++                k+ ++         ++ +  lee++++k+ ++++
  KHJ33306.1 136 LTAQRERYIQDTRIHCCLFFIQPSGHalkpidivvL-----KKLSDvvnvvpvIAKSDSLTLEEQSAFKERIKEE 205
                 777777777666666666666666663333222220.....2222244455444444444444555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        83  (0.00462937); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 2540.85
//
Query:       KHJ33307.1  [L=115]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       462  (0.0257683); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 944.21
//
Query:       KHJ33308.1  [L=199]
Description: putative guanylate kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-63  212.9   0.0    3.1e-63  212.7   0.0    1.0  1  Guanylate_kin    Guanylate kinase
    6.2e-05   23.5   0.4    0.00028   21.3   0.4    1.9  1  AAA_16           AAA ATPase domain
    0.00014   21.9   0.1    0.00037   20.5   0.1    2.0  1  MMR_HSR1         50S ribosome-binding GTPase
    0.00026   21.6   0.9     0.0014   19.2   0.3    2.2  2  AAA_18           AAA domain
    0.00081   19.3   0.1      0.002   18.0   0.0    1.7  2  RsgA_GTPase      RsgA GTPase
      0.005   17.1   0.1     0.0067   16.7   0.1    1.6  1  AAA_22           AAA domain
  ------ inclusion threshold ------
       0.01   16.0   0.2      0.063   13.4   0.2    2.0  1  AAA_33           AAA domain
      0.012   15.7   0.1        4.4    7.4   0.0    2.4  2  ADK              Adenylate kinase
       0.02   14.6   0.1       0.62    9.7   0.0    2.1  2  Thymidylate_kin  Thymidylate kinase
      0.028   15.0   0.3      0.044   14.3   0.3    1.7  1  ABC_tran         ABC transporter
      0.047   13.3   0.0       0.06   12.9   0.0    1.2  1  DUF2110          Uncharacterized protein conserved in archaea
      0.051   14.0   0.6       0.55   10.7   0.0    2.3  2  AAA_17           AAA domain
      0.058   13.6   0.6        2.4    8.4   0.1    2.3  2  AAA_28           AAA domain
       0.06   13.2   0.4        2.5    7.9   0.0    2.3  2  dNK              Deoxynucleoside kinase
       0.18   12.2   0.3       0.69   10.3   0.3    2.2  1  AAA              ATPase family associated with various cellul
       0.19   11.9   1.3       0.28   11.4   0.5    1.7  1  T3SS_needle_E    Type III secretion system, cytoplasmic E com


Domain annotation for each model (and alignments):
>> Guanylate_kin  Guanylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.7   0.0   2.8e-66   3.1e-63       3     180 ..      16     197 ..      14     199 .] 0.98

  Alignments for each domain:
  == domain 1  score: 212.7 bits;  conditional E-value: 2.8e-66
                    SEEEEESTTTSSHHHHHHHHHHHSTTTEEE--EEESS---TTS-TTTSEEE--HHHHHHHHHTTTEEEEEEETTEEEEEEHHHHHHHHHTTSEEEE CS
  Guanylate_kin   3 rpvvlvgpsgaGksslkkaLlselpekfgvsvshtTrdprkgevdGkdYyFvskeemekdiskneflEaaefsgnlygtsveaieevlekgkiviL 98 
                    rp+v++gpsg+Gk +l + Ll+++p+ f+  +shtTr+pr ge dG++YyF+s+ee+e+ i++ +f+E+a+fsgn ygts+++i+++l++++  +L
     KHJ33308.1  16 RPLVISGPSGVGKGTLCNLLLTRYPSVFATTISHTTRTPRVGELDGREYYFISNEEFERLIQHGAFVEHAQFSGNRYGTSKNTINQILNENRVPVL 111
                    9*********************************************************************************************** PP

                    E--CHHHHHHHHTTTTEEEEEEEESSHHHHHHHHTTSSSSHHHHHHHHHHHHHHHHGGG..C..SSEEEEESSHHHHHHHHHHHHH CS
  Guanylate_kin  99 DvdiqavkqlrkaelspiivFikppslkelqrrlksrgkeqeeklakrlaaaekelqey..e..fdvvivnddleealkklkelle 180
                    D+++++vkq+++ +++++++Fi+ppsl+ l++rl++rg+e+ee+++krla+a++e++++  e  +d++ivnd+le+a+++l++++ 
     KHJ33308.1 112 DIEMEGVKQIKESQIAARYIFIAPPSLDILEQRLRGRGTEKEESIQKRLAQAQNEIAYAatEgaHDIIIVNDNLEQAYAHLEKFIF 197
                    ********************************************************998777*********************996 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.4   2.5e-07   0.00028      25     149 ..      16     190 ..       5     198 .. 0.61

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 2.5e-07
      AAA_16  25 elvllsGesGvGKsslvrellralekd....................ggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawreklee 103
                 + +++sG+sGvGK +l + ll+++                       + +f                       +e ++ l ++ +  e+++++    +
  KHJ33308.1  16 RPLVISGPSGVGKGTLCNLLLTRYPSVfattishttrtprvgeldgrEYYF---------------------ISNEEFERLIQHGAFVEHAQFSGNRYG 93 
                 7899*****************977754333333333333333333321222.....................122344444444333333333333333 PP

      AAA_16 104 ala...................................................avpelagaeasrllellkrllallsrderplvlvlDdlqwade 149
                 + +                                                    + e + ++ +rl+++ ++++  ++++++ +++v D+l++a +
  KHJ33308.1  94 TSKntinqilnenrvpvldiemegvkqikesqiaaryifiappsldileqrlrgRGTEKEESIQKRLAQAQNEIAYAATEGAHDIIIVNDNLEQAYA 190
                 322555556666666666666677777777777788888888877776666644444444444499999999999777777889********98865 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.1   3.3e-07   0.00037       3      51 ..      19      67 ..      17     197 .. 0.91

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 3.3e-07
                EEEESTTSSHHHHHHHHHTS..TEEESSSTTSSSSEEEEEEEETTEEEEEE CS
    MMR_HSR1  3 aivGrpNvGKStLinaltge..kaivsdkpgtTrdinegrvklkgkeielv 51
                +i G + vGK tL n l+ +   + ++ +  tTr+++ g+++  g+e++++
  KHJ33308.1 19 VISGPSGVGKGTLCNLLLTRypSVFATTISHTTRTPRVGELD--GREYYFI 67
                789**************999777899*************998..7777665 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.3   1.2e-06    0.0014       2     120 ..      19     155 ..      18     164 .. 0.67
   2 ?    1.3   0.1      0.41   4.5e+02      57      93 ..     157     195 ..     150     197 .. 0.67

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 1.2e-06
      AAA_18   2 lltGtpGvGKttlakeLskrlgf.........gvnlrdvakenglllevdpe....aldeskrldedkldklldaleenssaleegknlvidghlaele 87 
                 +++G++GvGK tl++ L  r  +         ++  +  + e + +     e      +e++rl ++   + + ++ +n+  ++  kn  i ++l+e++
  KHJ33308.1  19 VISGPSGVGKGTLCNLLLTR--YpsvfattisHTTRTPRVGELDGR-----EyyfiSNEEFERLIQHGAFVEHAQFSGNR--YGTSKN-TINQILNENR 107
                 699**************666..333465555522222222222222.....13333357888888888888888888876..577777.6777777776 PP

      AAA_18  88 .seaakdikk.............vvLtasp.eelleRlekRgyeeaki 120
                  +  ++++ +             +++  +  ++l +Rl+ Rg+e+ + 
  KHJ33308.1 108 vPVLDIEMEGvkqikesqiaaryIFIAPPSlDILEQRLRGRGTEKEES 155
                 3555555555888888999999666666559***********887654 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.41
      AAA_18  57 ldklldaleenss..aleegknlvidghlaeleseaakd 93 
                 +++l +a +e++   +++ ++ +++ + l++ + +  k+
  KHJ33308.1 157 QKRLAQAQNEIAYaaTEGAHDIIIVNDNLEQAYAHLEKF 195
                 334444444444456799999999999999999988876 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   1.8e-06     0.002      99     123 ..      14      39 ..       5      63 .. 0.74
   2 ?   -3.1   0.0       5.8   6.5e+03      73     135 ..     161     172 ..     150     192 .. 0.48

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 1.8e-06
                  T.SEEEEECSTTSSHHHHHHHHCTT- CS
  RsgA_GTPase  99 d.ktsvlvGqSGvGKStLinallpel 123
                  d +  v+ G+SGvGK tL n ll + 
   KHJ33308.1  14 DiRPLVISGPSGVGKGTLCNLLLTRY 39 
                  556689****************9864 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 5.8
                  HHTTSEEEE--TTTHTTHHHHHHHCTTSEEEEECSTTSSHHHHHHHHCTT-----S------- CS
  RsgA_GTPase  73 ealgyevllvsaktkegleelkellkdktsvlvGqSGvGKStLinallpelelktgevseklg 135
                  +++                                                    +e+  +  
   KHJ33308.1 161 AQA---------------------------------------------------QNEIAYAAT 172
                  222...................................................222222222 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.1   5.9e-06    0.0067       7      37 ..      17      47 ..      12     187 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 5.9e-06
      AAA_22  7 ilvvtGesGtGKTtllrrlleqldeeakaee 37
                 lv+ G+sG+GK tl++ ll +++ + + + 
  KHJ33308.1 17 PLVISGPSGVGKGTLCNLLLTRYPSVFATTI 47
                589*******************988766555 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   5.6e-05     0.063       3     135 ..      19     165 ..      18     187 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 5.6e-05
      AAA_33   3 llvGlpGsGKstlaerllkklg...avllssdtlrr.rlfgtdqqsktdytr..vldrlyqilnelarkalsagrnvil.datnls..rrer....... 85 
                 ++ G++G+GK tl   ll + +   a+++s  t r+ r+ + d  ++ + +     +rl+q+  ++++ a+ +g+ + +  +t  +  +++r       
  KHJ33308.1  19 VISGPSGVGKGTLCNLLLTRYPsvfATTISHTT-RTpRVGELDG-REYYFISneEFERLIQH-GAFVEHAQFSGNRYGTsKNTINQilNENRvpvldie 114
                 578***************999999777777766.5515554444.44444431133445555.478888888887776657775554433333555555 PP

      AAA_33  86 .arflklarrlgvpvrivvvetdeetlkeRlakRaangddrsevpeealdr 135
                  + + ++ + + +++ i +  ++ + l++Rl+ R  +++++++  +++ ++
  KHJ33308.1 115 mEGVKQIKESQIAARYIFIAPPSLDILEQRLRGRGTEKEESIQKRLAQAQN 165
                 255555555444556667777788999999999999988888777776665 PP

>> ADK  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0039       4.4       1      21 [.      20      40 ..      20      49 .. 0.86
   2 ?    6.0   0.0     0.011        12      96     138 ..     121     166 ..     111     170 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0039
                EEESTTSSHHHHHHHHHHHHT CS
                xxxxxxxxxxxxxxxxxxxxx RF
         ADK  1 llGaPgaGKGtqaeklvkkyg 21
                + G+ g GKGt ++ l ++y 
  KHJ33308.1 20 ISGPSGVGKGTLCNLLLTRYP 40
                5799************99986 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.011
                 HHHHTSEESEEEEEE--HHHHHHHHHT...GSHHHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxx RF
         ADK  96 leeekvkldlvleldvpeevlveRltg...DneetvkkRletykkq 138
                 ++e+++   +++    + ++l +Rl g   ++ee+++kRl++ +++
  KHJ33308.1 121 IKESQIAARYIFIAPPSLDILEQRLRGrgtEKEESIQKRLAQAQNE 166
                 5556666666666666779999999999999*********997765 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00055      0.62       2      85 ..      21     111 ..      20     113 .. 0.75
   2 ?    3.3   0.1     0.053        60     120     171 ..     130     180 ..     109     193 .. 0.56

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00055
                      EESTTSSHHHHHHHHHHHHHHTTE.EEEESSSTTSHHHHH.HHHHHH.TCS---HHH......HHHHHHHHHHHTTHHHHHHHHHTT-EEEE CS
  Thymidylate_kin   2 EGlDGaGKttqaellkerlkeegikvvltrepggteiGek.irelll.keeeleeqt......eallfaadriehleekikpalkqgktviv 85 
                       G  G+GK t ++ll  r+++      +++  ++ ++Ge+  re+    +ee+e++       e+  f+ +r+ +  + i + l+++++ ++
       KHJ33308.1  21 SGPSGVGKGTLCNLLLTRYPSVFAT-TISHTTRTPRVGELdGREYYFiSNEEFERLIqhgafvEHAQFSGNRYGTSKNTINQILNENRVPVL 111
                      6899******************975.666666666677763355555567888877777788888889888888888888888887776655 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.053
                      EEEEEESSHHHHHTSCCTTSSTTTSHHHHHHHHHHHHHHHHHHHHTTSTEEE CS
  Thymidylate_kin 120 ltflldvdpevalkRlakrdeldeeeeeqldflrkvrerylelakederili 171
                      ++f+   + ++  +Rl+ r++ ++ee  q++  +   e ++++ +    i+i
       KHJ33308.1 130 YIFIAPPSLDILEQRLRGRGT-EKEESIQKRLAQAQNEIAYAATEGAHDIII 180
                      55555567788899*****99.444444444444444444444443333333 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.3     4e-05     0.044      14      37 ..      18      41 ..       9     176 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 4e-05
                EEEEESTTSSHHHHHHHHTTSS-- CS
                xxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 14 vaivGenGaGKStLlkllagllkp 37
                ++i G++G GK tL++ll+  +  
  KHJ33308.1 18 LVISGPSGVGKGTLCNLLLTRYPS 41
                7899**************998865 PP

>> DUF2110  Uncharacterized protein conserved in archaea (DUF2110)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   5.3e-05      0.06     100     166 ..     114     184 ..      68     191 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 5.3e-05
     DUF2110 100 elkpLgegspeqiaerFGlvqhlplevevee....veeeekeiearltdeqvdrlyewkkgkedrlivnsa 166
                 e++   + + +qia r+ ++   +l +  ++      e+e++i++rl+++q +  y  ++g +d +ivn  
  KHJ33308.1 114 EMEGVKQIKESQIAARYIFIAPPSLDILEQRlrgrGTEKEESIQKRLAQAQNEIAYAATEGAHDIIIVNDN 184
                 55556678999*********999999877655554345677788************************975 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00049      0.55       2      20 ..      22      40 ..      21      50 .. 0.85
   2 ?    0.9   0.1      0.51   5.7e+02     101     135 ..     125     156 ..     107     159 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00049
                E-TTSSHHHHHHHHHHHHT CS
      AAA_17  2 GgPGsGKgtqceklvekyg 20
                G+ G+GKgt+c+ l  +y 
  KHJ33308.1 22 GPSGVGKGTLCNLLLTRYP 40
                99*********99988885 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.51
                 ..SEEEEEE--HH.HHHHHHHHHTTST-TS-SHHHH CS
      AAA_17 101 kpdaiilleadpe.eilerrlkdrtrgrdddneesi 135
                 ++ a  ++ a+p  +ile+rl+    gr  + eesi
  KHJ33308.1 125 QIAARYIFIAPPSlDILEQRLR----GRGTEKEESI 156
                 4444344444544488888885....6666666666 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.1    0.0021       2.4       3      27 ..      19      43 ..      17      54 .. 0.84
   2 ?    3.4   0.0     0.073        82     109     151 ..     127     170 ..      94     187 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0021
      AAA_28  3 vitGgestGKTtlleaLaargypvv 27
                vi+G+++ GK tl++ L  r  +v+
  KHJ33308.1 19 VISGPSGVGKGTLCNLLLTRYPSVF 43
                9***************988866555 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.073
      AAA_28 109 ydl.vfllppapeidddgeRredleereaiderlrealrelgip 151
                  ++ +f+ pp+ +i +   R  + e+ e i++rl +a +e+ + 
  KHJ33308.1 127 AARyIFIAPPSLDILEQRLRGRGTEKEESIQKRLAQAQNEIAYA 170
                 34458888888888888999999999999999999988887765 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0022       2.5       1      23 [.      18      40 ..      18      53 .. 0.84
   2 ?    3.5   0.1     0.051        57     124     154 ..     128     159 ..      68     171 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0022
                EEEEESTTSSHHHHHHHHHCCST CS
         dNK  1 ivveGnIgaGKstlvklLskklg 23
                +v++G+ g+GK tl +lL  +++
  KHJ33308.1 18 LVISGPSGVGKGTLCNLLLTRYP 40
                69**************9988775 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.051
                 SEEEEEE-.-HHHHHHHHHHCTTCCCTTS-HH CS
         dNK 124 dlliYLka.sletclerikkRgreeekkield 154
                    i++   sl+ +++r++ Rg e+e+ i+++
  KHJ33308.1 128 ARYIFIAPpSLDILEQRLRGRGTEKEESIQKR 159
                 5566766415788899**********999875 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.3   0.00061      0.69       2      26 ..      19      43 ..      18     191 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00061
                EEESSTTSSHHHHHHHHHHHHTHEE CS
         AAA  2 llyGppGtGKTllakavakelgvef 26
                +++Gp G+GK +l++ + +   + f
  KHJ33308.1 19 VISGPSGVGKGTLCNLLLTRYPSVF 43
                689*************999964333 PP

>> T3SS_needle_E  Type III secretion system, cytoplasmic E component of needle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.5   0.00025      0.28       4      37 ..     141     174 ..     139     177 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00025
                    HHHHHCCCCTHHHHHHHHHHHHHHHHHHHHHCCT CS
  T3SS_needle_E   4 LEdrLrhapgeqakelqdrLeaArarLkqalssp 37 
                    LE rLr    e+ +++q+rL++A+++++ a+  +
     KHJ33308.1 141 LEQRLRGRGTEKEESIQKRLAQAQNEIAYAATEG 174
                    9*******999****************9988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       864  (0.0481901); expected 358.6 (0.02)
Passed bias filter:                      633  (0.0353059); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 1475.70
//
Query:       KHJ33309.1  [L=125]
Description: putative 60s ribosomal protein l22 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.1e-45  153.6   0.7    2.5e-45  153.3   0.7    1.0  1  Ribosomal_L22e  Ribosomal L22e protein family


Domain annotation for each model (and alignments):
>> Ribosomal_L22e  Ribosomal L22e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.3   0.7   1.4e-49   2.5e-45       1     109 []      13     121 ..      13     121 .. 0.98

  Alignments for each domain:
  == domain 1  score: 153.3 bits;  conditional E-value: 1.4e-49
  Ribosomal_L22e   1 kkklkftidcskpvedkildvaefekfLkerikvngktgnlgdkveieregkskvtvtsevkfskrylkyltkkyLkkkqlrdwlrvvasskesY 95 
                     k+++kf+i++s+pv+dkildv++fekfL+e+ikv+g++gnlgd v+i++ g+ k++v ++++fs+rylkyl kk+Lkk+qlrdwlrvv++ k  Y
      KHJ33309.1  13 KVTRKFIINASQPVSDKILDVSAFEKFLQEKIKVDGRVGNLGDIVQISQIGDGKIEVIAHTQFSGRYLKYLSKKFLKKQQLRDWLRVVSTAKGVY 107
                     6789******************************************************************************************* PP

  Ribosomal_L22e  96 eLryfnieedeeee 109
                     eLr+fn+++d+e++
      KHJ33309.1 108 ELRFFNVQNDAEDD 121
                     **********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       662  (0.0369234); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 997.88
//
Query:       KHJ33310.1  [L=213]
Description: putative ppe family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       885  (0.0493614); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1623.81
//
Query:       KHJ33311.1  [L=1023]
Description: putative ran-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.021   15.5   1.1      0.021   15.5   1.1    4.8  5  NUP50     NUP50 (Nucleoporin 50 kDa)


Domain annotation for each model (and alignments):
>> NUP50  NUP50 (Nucleoporin 50 kDa)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   1.1   1.2e-06     0.021      29      67 ..       5      53 ..       2      57 .. 0.81
   2 ?   -2.5   0.4      0.47   8.5e+03      52      66 ..     116     130 ..      98     133 .. 0.67
   3 ?   -2.7   0.8      0.57     1e+04      55      65 ..     444     454 ..     420     469 .. 0.57
   4 ?   -1.8   0.1      0.29   5.1e+03      55      71 .]     588     604 ..     564     604 .. 0.76
   5 ?   -3.5   0.7         1   1.8e+04      47      65 ..     666     679 ..     661     685 .. 0.55

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.2e-06
                XXXXSHHHHCS-S-S---TT..........T--XXXXXXXXXXXXXXXX CS
       NUP50 29 kkAseevLakRkIkkakrrv..........sssapseaasssafsgFsg 67
                ++A+++++a R Ik+ak ++          s+s++s +++ss  + F+g
  KHJ33311.1  5 QRANAAQMAARNIKMAKGKHlrrpglaqkeSTSTQSLSTPSSETGLFGG 53
                67*******************9999988665555557777777777776 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.47
                 XXXXXXXXXXXXXXX CS
       NUP50  52 apseaasssafsgFs 66 
                 ++++++ s++ +gFs
  KHJ33311.1 116 TSQTSQISQKLNGFS 130
                 222667777888887 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 0.57
                 XXXXXXXXXXX CS
       NUP50  55 eaasssafsgF 65 
                 +++s+++++ F
  KHJ33311.1 444 TSSSTPTANLF 454
                 33444444444 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 0.29
                 XXXXXXXXXXXXXXXX. CS
       NUP50  55 eaasssafsgFsgfgkp 71 
                 ++++ +  +gF +f++p
  KHJ33311.1 588 TNEKVKEINGFEAFKTP 604
                 677888999***99986 PP

  == domain 5  score: -3.5 bits;  conditional E-value: 1
                 TTT--XXXXXXXXXXXXXX CS
       NUP50  47 rvsssapseaasssafsgF 65 
                  ++     +++++s++s+F
  KHJ33311.1 666 SKD-----QPSEKSKSSSF 679
                 222.....34566666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1023 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1001  (0.0558313); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.27s 00:00:01.01 Elapsed: 00:00:00.43
# Mc/sec: 7105.44
//
Query:       KHJ33312.1  [L=835]
Description: putative duf1212 domain membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-66  223.7  20.4    1.2e-64  218.0   2.3    2.8  3  ThrE      Putative threonine/serine exporter
    8.2e-14   51.8  28.7    1.6e-12   47.7   9.7    3.4  3  ThrE_2    Threonine/Serine exporter, ThrE
  ------ inclusion threshold ------
      0.057   13.6   0.5        3.9    7.7   0.1    2.8  2  UPF0767   UPF0767 family


Domain annotation for each model (and alignments):
>> ThrE  Putative threonine/serine exporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.0   2.3   1.9e-68   1.2e-64       2     240 ..     402     644 ..     401     645 .. 0.96
   2 !   14.1   5.8   3.9e-06     0.023     108     198 ..     667     754 ..     661     762 .. 0.79
   3 ?    0.1   0.3     0.071   4.2e+02     119     178 ..     757     816 ..     754     824 .. 0.85

  Alignments for each domain:
  == domain 1  score: 218.0 bits;  conditional E-value: 1.9e-68
        ThrE   2 lilrlGeiLlesGaetyrvedtmkriaralgleevevfvtptsiivsvdeeeesittvrrv.rsrgvnleklsevnelsreiaageisleeaeerLdeI 99 
                 ++l+l+++L+++Ga+t+r+e+++++ ar+l++ + +++++p ++i+s+d+ e++ ++v+ v   + +nl+ l +v+e+++e++++ is+eea++rLd+I
  KHJ33312.1 402 YLLKLCRALMAFGAPTHRLEEYLRMSARVLEV-QGSFLYIPGCMIISFDDAETHSNEVKLVkVVQALNLGLLVDVHEIYKEVVHDVISVEEATQRLDKI 499
                 689*****************************.9**************86777777799998999********************************** PP

        ThrE 100 erskpryprwlvvlaaglaaaafallf.ggdwidflvaflagllggllrlll.akrglnsfvleavaaflasllallavslglgln...pdaiiigsil 193
                 + s+p y++w+ +l++g+a+a++a+ + +g+ id++++f++g ++g+l++++ +k  l+++v+e++a +++s+la++++s++   n   ++ai+++s++
  KHJ33312.1 500 NGSSPLYNPWTITLIYGFASAFVAPWAfQGRYIDMPICFVLGSIVGFLQHVVaPKCDLYNNVFEIAATVITSFLARAFGSIQN-GNvfcFSAIAQSSLA 597
                 *************************988************************99**************************863.334567********* PP

        ThrE 194 lLvPGlpltnavrDllsgdlvsGlaRlveailialaiafGivlalsl 240
                 l++PG++++++ ++++s+ l++G++R+v++i+++++++fGi++++++
  KHJ33312.1 598 LMLPGYIVLCGCLEIQSKSLIAGSVRMVYGIIYSFFLGFGISVGTAF 644
                 ********************************************987 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 3.9e-06
        ThrE 108 rwlvvlaaglaaaafallfggdwidflvaflagllggllrlll.akrglnsfvleavaaflasllallavslglglnpdaiiigsillLvPG 198
                 +w+ v ++ l+a   +l+ ++++ +++v+ ++g+ g+++++l+ +++     ++++++a++++ll+ + +++  +  ++a+i+ ++l+LvP 
  KHJ33312.1 667 KWVFVPIFTLCA---GLVNHARFRQLPVMIIIGFAGYIVNFLTfKRFPSSAQISNTLGALTVGLLGNFYGRMR-HGVAAAAIVPALLVLVPS 754
                 555555555544...55667888888888888888888888887999*******************9999974.3336*************6 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.071
        ThrE 119 aaafallfggdwidflvaflagllggllrlllakrglnsfvleavaaflasllallavsl 178
                 aa+ +ll+g +  d + +  +++ g  +  +++   ln++v+++  +++  +++l+++ +
  KHJ33312.1 757 AASGSLLAGLSSADKITTGTTSINGTSTVAVTSTEDLNKIVFNVGNSMVQIAIGLTVGLF 816
                 677788999999999999999999999999999999999999999999999998877664 PP

>> ThrE_2  Threonine/Serine exporter, ThrE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.023   1.4e+02      46      90 ..     401     445 ..     387     474 .. 0.76
   2 !    5.5  10.9    0.0029        17      12     127 ..     517     642 ..     510     647 .. 0.75
   3 !   47.7   9.7   2.6e-16   1.6e-12       3     128 ..     669     820 ..     667     821 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.023
      ThrE_2  46 sialasflaalaigllsellArriktPvtvflipgllplvPGlaa 90 
                 ++ l    a +a+g   + l  ++++++ v+ + g +  +PG  +
  KHJ33312.1 401 NYLLKLCRALMAFGAPTHRLEEYLRMSARVLEVQGSFLYIPGCMI 445
                 555556667788888888899999******************865 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0029
      ThrE_2  12 favifnvpk......rallvagllGa.vgwlvylllmelgvsialasflaalaigllsellArriktPvtvflipg...llplvPGlaaYktvlslvqg 100
                 fa +f +p+       +++++ +lG+ vg+l  +++ +++   ++  ++a+++ ++l++ ++ ++   v++f+ ++   l  + PG  +    l++ ++
  KHJ33312.1 517 FASAFVAPWafqgryIDMPICFVLGSiVGFLQHVVAPKCDLYNNVFEIAATVITSFLARAFGSIQNGNVFCFSAIAqssLALMLPGYIVLCGCLEIQSK 615
                 55555555444442235677777776167777777888**999*****************************987655599****************99 PP

      ThrE_2 101 nleeavengiealliagalavGlvlvs 127
                 +l      ++  ++  + l +G+++ +
  KHJ33312.1 616 SLIAGSVRMVYGIIYSFFLGFGISVGT 642
                 977766666666666666666666544 PP

  == domain 3  score: 47.7 bits;  conditional E-value: 2.6e-16
      ThrE_2   3 ilafiaalgfavifnvpkrallvagllGavgwlvylllme.lgvsialasflaalaigllsellArriktPvtvflipgllplvP.GlaaYktvlslv. 98 
                 +++ i++l+ +++++++ r+l+v+ ++G +g++v++l  + + +s  +++ l+al++gll+++++r+ +  +   ++p+ll lvP G+aa  ++l+ + 
  KHJ33312.1 669 VFVPIFTLCAGLVNHARFRQLPVMIIIGFAGYIVNFLTFKrFPSSAQISNTLGALTVGLLGNFYGRMRHGVAAAAIVPALLVLVPsGIAASGSLLAGLs 767
                 7999*********************************999899******************************************65666666666663 PP

      ThrE_2  99 ......qgn..................leeavengiealliagalavGlvlvsl 128
                       +                     + +++ g ++++ia++l vGl++++l
  KHJ33312.1 768 sadkitT-GttsingtstvavtstedlNKIVFNVGNSMVQIAIGLTVGLFMSTL 820
                 4344431.0444455555666666665677888899999**********99876 PP

>> UPF0767  UPF0767 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1     0.021   1.3e+02      14      29 ..     530     546 ..     522     556 .. 0.85
   2 ?    7.7   0.1   0.00065       3.9       6      32 ..     677     703 ..     671     719 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.021
     UPF0767  14 pyvtlPvaavvGvi.Gy 29 
                 +y+ +P+ +v+G+i G+
  KHJ33312.1 530 RYIDMPICFVLGSIvGF 546
                 7***********75265 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00065
     UPF0767   6 lallrtyapyvtlPvaavvGviGynlE 32 
                 +a l + a++  lPv +++G+ Gy + 
  KHJ33312.1 677 CAGLVNHARFRQLPVMIIIGFAGYIVN 703
                 56788999****************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (835 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1053  (0.0587317); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.26s 00:00:00.99 Elapsed: 00:00:00.44
# Mc/sec: 5653.79
//
Query:       KHJ33313.1  [L=192]
Description: putative dynactin subunit 5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.8e-05   23.6  10.5      0.001   18.7   1.6    4.7  5  Hexapep     Bacterial transferase hexapeptide (six repeats)
    0.00012   21.8   5.0     0.0006   19.5   0.2    3.1  3  Hexapep_2   Hexapeptide repeat of succinyl-transferase
     0.0058   15.6   0.0     0.0074   15.3   0.0    1.2  1  Fucokinase  L-fucokinase
  ------ inclusion threshold ------
      0.079   12.9   0.0       0.63   10.0   0.0    2.2  2  DUF1416     Protein of unknown function (DUF1416)


Domain annotation for each model (and alignments):
>> Hexapep  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.2     0.064   2.9e+02       3      17 ..      32      46 ..      28      48 .. 0.52
   2 ?    1.0   0.0     0.088   3.9e+02      23      35 ..      70      82 ..      70      83 .. 0.89
   3 !    9.9   1.1   0.00013       0.6       2      29 ..      97     123 ..      96     124 .. 0.91
   4 !   18.7   1.6   2.3e-07     0.001       3      34 ..     115     146 ..     113     148 .. 0.92
   5 ?   -2.7   0.0       1.3   5.8e+03      20      23 ..     164     167 ..     161     168 .. 0.56

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.064
                EEETTEEE-TTEEEE CS
     Hexapep  3 vIGsnvlIgpfavig 17
                ++G +++I + ++i+
  KHJ33313.1 32 ILGGKTVIQAEVIIR 46
                444555555555554 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.088
                -TTEEEETTEEEE CS
     Hexapep 23 GdnvkIgagvvig 35
                G+++  ++g+ ++
  KHJ33313.1 70 GRYCFFARGCELR 82
                99*******9876 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00013
                 EEEETTEEE-TTEEEETTEEE-TTEEEE CS
     Hexapep   2 tvIGsnvlIgpfaviggnVkIGdnvkIg 29 
                 ++I ++v++g+++v+ + + IG++v Ig
  KHJ33313.1  97 LRISDHVFVGSGSVV-EAALIGSHVNIG 123
                 5799***********.8899*******9 PP

  == domain 4  score: 18.7 bits;  conditional E-value: 2.3e-07
                 EEETTEEE-TTEEEETTEEE-TTEEEETTEEE CS
     Hexapep   3 vIGsnvlIgpfaviggnVkIGdnvkIgagvvi 34 
                  IGs+v Ig  ++ig  ++I d+v+I  g+v+
  KHJ33313.1 115 LIGSHVNIGTRCIIGKFAIIKDYVRILDGSVV 146
                 69************************999998 PP

  == domain 5  score: -2.7 bits;  conditional E-value: 1.3
                 EEE- CS
     Hexapep  20 VkIG 23 
                 V+IG
  KHJ33313.1 164 VVIG 167
                 5665 PP

>> Hexapep_2  Hexapeptide repeat of succinyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.39   1.8e+03      17      32 ..      30      45 ..      24      46 .. 0.72
   2 ?    3.0   0.0      0.02        89       6      16 ..     101     111 ..      97     118 .. 0.64
   3 !   19.5   0.2   1.3e-07    0.0006       2      32 ..     120     152 ..     119     153 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.39
                SEEE-TT-EE-TT-EE CS
   Hexapep_2 17 GvslGdncvvgaGvvi 32
                 ++lG + v++a v+i
  KHJ33313.1 30 NIILGGKTVIQAEVII 45
                4888888888886665 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.02
                 TT-EE-TT-EE CS
   Hexapep_2   6 dnCliGanagi 16 
                 d +++G+ +++
  KHJ33313.1 101 DHVFVGSGSVV 111
                 66666666664 PP

  == domain 3  score: 19.5 bits;  conditional E-value: 1.3e-07
                 EEE-TT-EE-TT-EE.S.EEE-TT-EE-TT-EE CS
   Hexapep_2   2 viIGdnCliGanagi.G.vslGdncvvgaGvvi 32 
                 v IG +C+iG++a+i   v + d++vv ++ v+
  KHJ33313.1 120 VNIGTRCIIGKFAIIkDyVRILDGSVVPPNMVV 152
                 78*************978***********9997 PP

>> Fucokinase  L-fucokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.6e-06    0.0074     281     336 ..      99     158 ..      59     166 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.6e-06
  Fucokinase 281 lessvsvgegsviehsslkgnvsigsnsivsglelessee....slelpddtilqtlslk 336
                 ++ +v vg gsv+e   ++++v+ig+++i+    + ++         +p ++++ + s++
  KHJ33313.1  99 ISDHVFVGSGSVVEAALIGSHVNIGTRCIIGKFAIIKDYVrildGSVVPPNMVVPSFSIV 158
                 678999************************999999764466666666666666666665 PP

>> DUF1416  Protein of unknown function (DUF1416)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00014      0.63      15      64 ..      32      77 ..      13      82 .. 0.68
   2 ?    0.2   0.0      0.15   6.7e+02      32      44 ..     132     144 ..     106     149 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00014
     DUF1416 15 dvekeaviqGkvtrdgepvggayvRLL.dssgeFtaevvtsaeGefrFfaa 64
                 +  ++viq     ++  + g   R    +sge  a+ v+ ++G++ Ffa+
  KHJ33313.1 32 ILGGKTVIQ-----AEVIIRGDLLRTYpSTSGEMLANQVAVSTGRYCFFAR 77
                233444444.....44455555666551568******************97 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.15
     DUF1416  32 pvggayvRLLdss 44 
                 ++   yvR+Ld+s
  KHJ33313.1 132 AIIKDYVRILDGS 144
                 5566799999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       259  (0.0144459); expected 358.6 (0.02)
Passed bias filter:                      240  (0.0133861); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1438.18
//
Query:       KHJ33314.1  [L=837]
Description: putative ap-1 complex subunit gamma-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   5.6e-144  480.6   2.6   7.4e-144  480.2   2.6    1.1  1  Adaptin_N        Adaptin N terminal region
    2.2e-20   73.0   0.3    5.7e-20   71.7   0.3    1.7  1  Alpha_adaptinC2  Adaptin C-terminal domain
    3.6e-09   36.9   5.0    1.3e-05   25.3   0.0    4.1  4  Cnd1             non-SMC mitotic condensation complex subunit
    7.1e-06   26.3   0.4        0.1   13.0   0.0    3.9  5  HEAT_2           HEAT repeats
    7.1e-05   22.5   0.1      0.017   14.7   0.1    2.8  3  DUF3730          Protein of unknown function (DUF3730)
    8.7e-05   22.5   0.9        1.8    9.0   0.0    4.2  3  HEAT             HEAT repeat
  ------ inclusion threshold ------
      0.042   13.4   0.7        2.9    7.4   0.0    3.1  4  CLASP_N          CLASP N terminal


Domain annotation for each model (and alignments):
>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  480.2   2.6  2.9e-147  7.4e-144       1     520 [.      26     587 ..      26     590 .. 0.95

  Alignments for each domain:
  == domain 1  score: 480.2 bits;  conditional E-value: 2.9e-147
                 XHHHCCHHHHHHCCSSS...-SCHHHHHHHHHHHHHHHCT---GHHHHHHHCCCCSS-CHHHHHHHHHHHHHCTTSCCHHCCCCHHHHHHCCSSSHHHH CS
   Adaptin_N   1 eekriqqelaeilnsnk...dddekkkeavkkliylialGedvsflffevvklvaskdfelKrlvYlylellaeesedlalLvtnslqkDlkdpnqlir 96 
                 e+++iq+e+a+i+ s++   +d++ ++++v+kl+yl++lGe+++f+++e++kl+as +f +Krl+Yl  +ll++e++++++Lvtnsl++Dl+++nq+i+
  KHJ33314.1  26 ERAVIQKESAAIRASFReesGDSNVRRNNVAKLLYLFTLGERTHFGQIECLKLLASPRFADKRLGYLGTMLLLDENQEVLTLVTNSLKNDLNHSNQYIV 124
                 5789****************9****************************************************************************** PP

                 HHHHHHHCCC--CCCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCTT-SSHHHHHHHHHHHHHH........HCCCCCCC CS
   Adaptin_N  97 glALrvLssirvpelaedlapaikkllkdrspyvrkkAalailklykkdpdllrkqlveeikellsdkdpgvvlaAvalleei........kkndrlll 187
                 glAL++L++i + e+++dl+p+i++ll+  +py+rkkAal+++++ kk pdl++++ +e+ + l+sd+++gv+l+ ++l +++        +  +++ +
  KHJ33314.1 125 GLALCTLGNIASIEMSRDLFPEIENLLSTANPYIRKKAALCAMRICKKVPDLQEHF-FEKAETLISDRNHGVLLCGLTLVTSLceadieadEEGEENIV 222
                 *****************************************************996.**************************6655555322222222 PP

                 ....HHHHHHHCCHHHHH...............HCS-HHHHHHHHHHHCC---SSHHHH..HHHHHHHCGGCG.......CSSCHHHHHHHHHCCHCCC CS
   Adaptin_N 188 ....kllpklvrrLcnll...............teldpwlqvkiiklltrlarqepeerskkellesllnllq.......ssnnaVlletvnlivelap 260
                      l  +lv+     l               +++dp+lqvki++ll+ lar +pe +   e ++++l++++       +++n++l+e+v +i +++ 
  KHJ33314.1 223 ekfrPLTGSLVQT----LkalassgyapehdviGITDPFLQVKILQLLRVLARGDPETS---EQINDILAQVAtntdstkNVGNSILYEAVLTILDIEA 314
                 3444444555555....15556*******************************999999...469999999999999********************** PP

                 CSTHHHCCHHCHHHHHHSSCCTCHHHHHCHHHHHHHHXXTTTT.TTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHHHHHHHHHHTTSSXXHHHHH CS
   Adaptin_N 261 knelivlavnaLvrllsskdenlryvaLrtllkivkkepkavq.hldlkifllktdddvsirlkaldlllklvdesNvkeivkeLkkyvkevadedfks 358
                 ++ l+vl vn+L+++ls++d+n+ryvaL+tl k+v  ep+avq h+++++++l+ d+d+sir++aldl+++l++esNv+ +++eL+ ++ evad +fk 
  KHJ33314.1 315 DSGLRVLGVNILGKFLSNRDNNIRYVALNTLIKVVAVEPNAVQrHRNTILECLR-DPDISIRRRALDLSFTLINESNVRLLIRELLAFL-EVADSEFKP 411
                 ******************************************************.**********************************.********* PP

                 HHHHHHHHHHHHSCCHHHHHHHHHHHHHTTXXHHHHHHHHHHHHHHHHHSTTTSTTCHHHHCCTCCG.XXSHHHHHHHHHHHHHTTTTXTT........ CS
   Adaptin_N 359 klvkaIgrlaekfatdaewvldvllellslsgesvkdeivevirdliqkvpelheeiiekLaellek.ieseearaaaiWllGeygelvsn........ 448
                  + ++Ig+ a++f ++++w++d++l++lsl+g++vk++i++++++li ++pe + ++++kL+  l+k i++e +  a  W++Gey++ +          
  KHJ33314.1 412 IMTSQIGIAADRFSPNTRWHIDTMLRVLSLAGNYVKEQILSSFIRLIATTPEFQTYAVQKLYTSLKKdITQEGLTLAGTWCIGEYADALLSgaqydkee 510
                 *******************************************************************9******************************* PP

                 .........HHHHHHCTTTTTTTSXHHHHHHHHHHHHHHHHCXGCC.THXHHHHHHHHHHHXXSHHHHHHHHHHHHHH CS
   Adaptin_N 449 .....te.sasdllrslaekfvlesekvklqiltalvKlyltspdketqekliqlvlslatssdlevrdRaveylqll 520
                      +e ++ dl++s++++ +++   +  +i t+++Kl ++++d  + ++++ ++ + +ts+d+ev++Ravey +l+
  KHJ33314.1 511 pineiKEkDVVDLFSSILNSSYATLI-ITEYITTSMMKLTTRFSDPAQIDRIRRILHNNTTSLDVEVQQRAVEYGNLF 587
                 ****9777***********9988766.8899*******************************************9987 PP

>> Alpha_adaptinC2  Adaptin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.7   0.3   2.2e-23   5.7e-20       4     108 ..     730     834 ..     727     836 .. 0.93

  Alignments for each domain:
  == domain 1  score: 71.7 bits;  conditional E-value: 2.2e-23
                      EEEEETTEEEEEEEEETTSTTEEEEEEEEEE-S.SS-EEEEEEEEEEBTTCEEEEEEES-S-B-TTCEEEEEEEEEEESCTTS-EEEEEEEEEE CS
  Alpha_adaptinC2   4 vlyekddlqIgfkfekperpgqiritlsftNks.sqpisnfsfqaavpkslklqlqppsstvlppnpggqitqvllienpskkplrmrlrisyk 96 
                        yek++lq++f +++ ++ g++++ ++f+N s  + isn+ +qaavpk++klql ++s t+l+p  g++++q ++i + ++ plr+rl+i y+
       KHJ33314.1 730 SCYEKNELQLTFLLQR-NSEGTVQVLAKFKNISpISSISNLILQAAVPKTQKLQLHAISNTNLLP--GTEASQLMKIMGSKGPPLRLRLKIAYL 820
                      68**************.****************99*****************************9..*************************** PP

                      .CTC..EEEEEEEEE CS
  Alpha_adaptinC2  97 .vgq..aikeqidvl 108
                         +  ++++q+d++
       KHJ33314.1 821 hT-SigQVQDQVDWS 834
                      53.336899998886 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.35   8.9e+02      65     125 ..      21      81 ..      17      90 .. 0.71
   2 ?    0.2   0.1      0.27   6.8e+02      64      89 ..      93     119 ..      73     125 .. 0.73
   3 !   25.3   0.0   5.1e-09   1.3e-05       4     141 ..     125     287 ..     122     307 .. 0.74
   4 !    9.6   0.3   0.00034      0.87      27      90 ..     327     391 ..     323     458 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.35
        Cnd1  65 klleDenprVvanalaalteisek..senaiynllpdiisklsdalnecsewgqitilefLls 125
                 k + De + +++ + a+     e+  ++n   n++ ++++ +   l e +  gqi+ l++L+s
  KHJ33314.1  21 KTIADERAVIQKESAAIRASFREEsgDSNVRRNNVAKLLYLFT--LGERTHFGQIECLKLLAS 81 
                 5677888888777777666666665333566666666666666..8899999***99999987 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.27
        Cnd1  64 akll.eDenprVvanalaalteiseks 89 
                  ++l  Den++V +++ ++l++ ++ s
  KHJ33314.1  93 GTMLlLDENQEVLTLVTNSLKNDLNHS 119
                 455549*********999998766555 PP

  == domain 3  score: 25.3 bits;  conditional E-value: 5.1e-09
        Cnd1   4 alairtlgcirvpnlveylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteisekse.......naiyn 95 
                 +la+ tlg i   ++   l +++++ L+  +py+Rk aa++  ++ ++    ++ f+++ ++l++D n+ V    l++ t + e +        ++i++
  KHJ33314.1 125 GLALCTLGNIASIEMSRDLFPEIENLLSTANPYIRKKAALCAMRICKKVPDLQEHFFEKAETLISDRNHGVLLCGLTLVTSLCEADIeadeegeENIVE 223
                 79**********************************************9999*******************9888888877777733123334456666 PP

        Cnd1  96 llpdiisklsdalne..................csewgqitilefLlsyipkdkqeaeslvekl 141
                  ++ +  +l++ l+                   + + +  + l++L++  p++++++++++ ++
  KHJ33314.1 224 KFRPLTGSLVQTLKAlassgyapehdvigitdpFLQVKILQLLRVLARGDPETSEQINDILAQV 287
                 6666666666644445556666666677764444444555555555555555555555555555 PP

  == domain 4  score: 9.6 bits;  conditional E-value: 0.00034
        Cnd1  27 rkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanal.aalteisekse 90 
                  k L+ +d  +R  a+ +++k++  +   ++ + ++++++l+D++ +++  al +++t i+e + 
  KHJ33314.1 327 GKFLSNRDNNIRYVALNTLIKVVAVEPNAVQRHRNTILECLRDPDISIRRRALdLSFTLINESNV 391
                 56677777777777777777777777777777777777777777777777665245555555543 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0     4e-05       0.1       3      59 ..     111     170 ..     109     185 .. 0.79
   2 ?   -2.4   0.0       2.5   6.4e+03      11      42 ..     255     290 ..     253     297 .. 0.51
   3 !    8.5   0.1     0.001       2.6      33      82 ..     323     378 ..     303     384 .. 0.72
   4 ?   -3.1   0.0       4.2   1.1e+04      33      53 ..     562     582 ..     546     588 .. 0.54
   5 ?   -3.5   0.0       5.7   1.5e+04      55      78 ..     656     679 ..     653     681 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 4e-05
      HEAT_2   3 aLlqalendpdpevrraairaLgrign....pealpaLvellededpavRraaaeaLgaig 59 
                  L + l n++++++   a+ +Lg+i++    ++++p + +ll++++p++R+ aa  + +i 
  KHJ33314.1 111 SLKNDL-NHSNQYIVGLALCTLGNIASiemsRDLFPEIENLLSTANPYIRKKAALCAMRIC 170
                 566778.899999999999999988753222699********************9887774 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.5
      HEAT_2  11 dpdpevrr.aairaLgrignp...ealpaLvelled 42 
                 dp+ +v++ + +r+L+r +++   ++ ++L +++++
  KHJ33314.1 255 DPFLQVKIlQLLRVLARGDPEtseQINDILAQVATN 290
                 555555544666666654333222445555555544 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.001
      HEAT_2  33 lpaLvellededpavRraaaeaLgai......gdpealpaLkellddddddvvRea 82 
                 +++L ++l++ d ++R+ a ++L ++      + ++  +  +e+l+d+d +++R+a
  KHJ33314.1 323 VNILGKFLSNRDNNIRYVALNTLIKVvavepnAVQRHRNTILECLRDPDISIRRRA 378
                 56677778888888888888888766443332235566888888888877777765 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 4.2
      HEAT_2  33 lpaLvellededpavRraaae 53 
                 +++L++  ++ d +v++ a+e
  KHJ33314.1 562 RRILHNNTTSLDVEVQQRAVE 582
                 333333334445556666655 PP

  == domain 5  score: -3.5 bits;  conditional E-value: 5.7
      HEAT_2  55 LgaigdpealpaLkellddddddv 78 
                 Lg+  ++ + ++L+++l+++d + 
  KHJ33314.1 656 LGKNSSQNNTDLLADILNSTDAPT 679
                 566667777888888887776655 PP

>> DUF3730  Protein of unknown function (DUF3730)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.79     2e+03       5      51 ..     113     156 ..     111     164 .. 0.76
   2 !   14.7   0.1   6.5e-06     0.017     103     155 ..     163     211 ..     140     226 .. 0.84
   3 !    4.3   0.0    0.0097        25      18      68 ..     230     295 ..     223     316 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.79
     DUF3730   5 lsalekssnpelvllllkglpsLarhkfcvpevlpfikvLssrtase 51 
                  + l +s n+ +v l l +l+++a+++ ++  + p i++L+s+ a++
  KHJ33314.1 113 KNDLNHS-NQYIVGLALCTLGNIASIE-MSRDLFPEIENLLST-ANP 156
                 5667777.9999999999999999999.777788888888877.455 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 6.5e-06
     DUF3730 103 AaslrdickhrPdqngedLvdaysavLvetesqvseaqalglelleaLcsaev 155
                 A + ++ick+ Pd   e ++   + ++   +++++ + ++gl l+ +Lc+a++
  KHJ33314.1 163 ALCAMRICKKVPDL-QEHFFEKAETLI---SDRNHGVLLCGLTLVTSLCEADI 211
                 344699********.999*********...********************953 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.0097
     DUF3730  18 llllkglpsLarhk.............fcvpevlpfikvLssrt..asellqavalrllaklwkgm 68 
                  +l+++l +La+ +             f  +++l++++vL+ ++  +se++  +++++ +++ + +
  KHJ33314.1 230 GSLVQTLKALASSGyapehdvigitdpFLQVKILQLLRVLARGDpeTSEQINDILAQVATNTDSTK 295
                 578999999999999999999999999999*************99999999999999988876554 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00071       1.8       1      30 [.     143     172 ..     143     173 .. 0.93
   2 ?    1.6   0.0      0.17   4.3e+02       7      28 ..     328     349 ..     323     351 .. 0.80
   3 !    7.3   0.1    0.0026       6.5       3      21 ..     361     379 ..     360     381 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00071
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaev 30 
                 l+P + +lls  +p +R+ Aa++  +++++
  KHJ33314.1 143 LFPEIENLLSTANPYIRKKAALCAMRICKK 172
                 689999*****************9999986 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.17
                 HHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   7 kllsDpspeVReaAakaLgala 28 
                 k ls  + ++R+ A+++L +++
  KHJ33314.1 328 KFLSNRDNNIRYVALNTLIKVV 349
                 66889999*********97765 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0026
                 HHHHHHHT-SSHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAa 21 
                 +++l++l+Dp+ ++R+ A+
  KHJ33314.1 361 NTILECLRDPDISIRRRAL 379
                 579************9997 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0011       2.9      90     157 ..     138     206 ..     101     236 .. 0.80
   2 ?    1.8   0.0     0.059   1.5e+02     171     196 ..     354     378 ..     278     392 .. 0.71
   3 ?    2.6   0.1     0.034        86      37      74 ..     353     390 ..     324     456 .. 0.62
   4 ?   -1.5   0.0      0.59   1.5e+03      35      71 ..     441     478 ..     428     482 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0011
     CLASP_N  90 pmveillptLlkllgdtKkiisqnanqalaallsnas.fsprilqvlsvalqdKnvqpReysaiwLkil 157
                 +m++ l+p + +ll+     i+++a+ +   ++++++ ++++ +   +++++d+n+   ++ +++++ l
  KHJ33314.1 138 EMSRDLFPEIENLLSTANPYIRKKAALCAMRICKKVPdLQEHFFEKAETLISDRNHGVLLCGLTLVTSL 206
                 478999*******************************555555************98777766666555 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.059
     CLASP_N 171 sllldliekslkkgleDanptVReta 196
                 ++ ++ +++++ ++l D++ ++R+ a
  KHJ33314.1 354 NA-VQRHRNTILECLRDPDISIRRRA 378
                 33.45566777778888887777766 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.034
     CLASP_N  37 gnvpedaveelleclkqlleailkalssLrttlsstgc 74 
                  n+ + + +++lecl++    i + +++L+ tl++++ 
  KHJ33314.1 353 PNAVQRHRNTILECLRDPDISIRRRALDLSFTLINESN 390
                 35666666666666666666666666666666666554 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 0.59
     CLASP_N  35 ikgn.vpedaveelleclkqlleailkalssLrttlss 71 
                 ++gn v+e+  ++++ ++ ++ e  + a+++L+t+l +
  KHJ33314.1 441 LAGNyVKEQILSSFIRLIATTPEFQTYAVQKLYTSLKK 478
                 56788999999999999999999999999999998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (837 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       698  (0.0389313); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.74u 0.29s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 5612.95
//
Query:       KHJ33315.1  [L=426]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.11   12.3   1.1       0.19   11.5   1.1    1.4  1  zf-CCHC_4  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_4  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.1   1.1e-05      0.19      31      48 ..     247     264 ..     246     265 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 1.1e-05
   zf-CCHC_4  31 rsfCyiCgvlGHsdkrCd 48 
                 +s+C  C ++GH +++C+
  KHJ33315.1 247 QSVCNFCSYIGHREEECR 264
                 589**************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1339  (0.0746835); expected 358.6 (0.02)
Passed bias filter:                      555  (0.0309554); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3026.31
//
Query:       KHJ33316.1  [L=122]
Description: hypothetical protein EV44_g4013 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       244  (0.0136092); expected 358.6 (0.02)
Passed bias filter:                      232  (0.0129399); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 961.23
//
Query:       KHJ33317.1  [L=183]
Description: putative tsa family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.1e-25   87.7   0.0    7.1e-25   87.4   0.0    1.0  1  Redoxin   Redoxin


Domain annotation for each model (and alignments):
>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.4   0.0     4e-29   7.1e-25       3     147 .]      32     182 ..      30     182 .. 0.89

  Alignments for each domain:
  == domain 1  score: 87.4 bits;  conditional E-value: 4e-29
                 TSBB---E.CCEETTCEEEEEHHH.HTTSEEEEEEESTTT-HHHHHTHH..HHHTHHHHHHCSTTTEEEEEESSSHHHHHHHHH.....TT-TSEEEE- CS
     Redoxin   3 gdkaPdft.lplaatdgnsvslse.fkgkkvvvnfvpgafcPtCsaehp..yleklaellkekgvdvvavvadndafvkefwgk.....eglkfpvlsD 92 
                 g+++Pd+  l + ++ gn+v l+e   + k+++++vp+af+P Cs++h+  y+++     k k+  +v+vva+nd+fv+++w++     ++  +++l D
  KHJ33317.1  32 GERIPDIDvLVE-DSPGNKVRLREvIGNDKALIIGVPAAFSPSCSNSHIpgYIKHQ----KLKDAGKVFVVAVNDPFVTKAWASsldpnKSSGIRFLGD 125
                 8999*9996444.69*********999999******************99888876....669999**********************98888****** PP

                 TTSHHHHHTT-TTEEE.GGG...EEE-EEEEEEETTEEEEEEESSSCHT.STTSHHHHH CS
     Redoxin  93 gsaaftkalGlrleedaseg...lrtpryavidedgkvvylevepepet.eesnaeavl 147
                 ++a+ft+al+l+   d  +    lr++rya+ ++ gk+++++vep++++ ++  ae+vl
  KHJ33317.1 126 PTAKFTEALDLA--FDGRAIfggLRSKRYALQIDSGKIKAMYVEPDNTGlNVTAAEKVL 182
                 **********66..55444457*************************879999998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       246  (0.0137208); expected 358.6 (0.02)
Passed bias filter:                      243  (0.0135535); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1460.26
//
Query:       KHJ33318.1  [L=519]
Description: putative ibr domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.1e-22   79.1  44.6    5.4e-13   49.0   4.8    4.8  4  IBR           IBR domain, a half RING-finger domain
    0.00053   19.8   6.3    0.00053   19.8   6.3    4.4  4  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    0.00096   19.4   5.0    0.00096   19.4   5.0    4.1  3  zf-RING_2     Ring finger domain
     0.0036   17.7   0.1      0.012   16.0   0.0    1.9  2  UN_NPL4       Nuclear pore localisation protein NPL4
  ------ inclusion threshold ------
      0.013   15.3   4.7      0.013   15.3   4.7    4.9  4  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> IBR  IBR domain, a half RING-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   3.9     0.019        69      26      55 ..     138     166 ..     134     170 .. 0.67
   2 !    5.1   0.1    0.0073        26       4      33 ..     165     195 ..     164     202 .. 0.80
   3 !   49.0   4.8   1.5e-16   5.4e-13       2      62 .]     208     274 ..     207     274 .. 0.86
   4 !   35.7  16.4   2.1e-12   7.5e-09      12      58 ..     291     338 ..     278     344 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.019
         IBR  26 CeaiieksegcksvtCskCgfefCfnCkke 55 
                 C+  +e++++ + +   kCg+++C++C + 
  KHJ33318.1 138 CDICYEDDSDLQ-SFALKCGHRYCIHCYRH 166
                 663444444433.34668*********865 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0073
         IBR   4 eklklkksles.dpnlkwCprpdCeaiieks 33 
                  +++ +k l++ +  +++C + +C++i+  +
  KHJ33318.1 165 RHYLSQKILDEgEAARIQCAKEGCKRIMDAK 195
                 5667777788877889***********9765 PP

  == domain 3  score: 49.0 bits;  conditional E-value: 1.5e-16
         IBR   2 kyeklklkkslesdpnlkwCprpdCeaiieksegcks.......vtCskCgfefCfnCkkewHeglsC 62 
                 +y++l++++++e++++++wCp+pdC ++ie   ++k+       vtC  C+++fCf C+ + H+++ C
  KHJ33318.1 208 RYNELLTRTYVEDKEKIRWCPAPDCVNAIECGIKKKDldkvvptVTCL-CRYRFCFGCGLADHQPAPC 274
                 8****************************554443334446777****.****************999 PP

  == domain 4  score: 35.7 bits;  conditional E-value: 2.1e-12
         IBR  12 les.dpnlkwCprpdCeaiieksegcksvtCskCgfefCfnCkkew..He 58 
                  ++ + n+k Cp   C++ iek+ gc+++tC+kC++efC+ C+  w  H+
  KHJ33318.1 291 ANWiSANTKECP--RCNSTIEKNGGCNHMTCRKCKHEFCWMCMGLWseHG 338
                 45557899****..9*******************************6554 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   6.3   1.5e-07   0.00053       1      32 [.     138     170 ..     138     188 .. 0.84
   2 ?   -0.9   3.0      0.44   1.6e+03      14      25 ..     253     264 ..     236     274 .. 0.82
   3 ?    2.1   0.2     0.051   1.8e+02      28      41 .]     292     304 ..     290     304 .. 0.83
   4 !    6.9  13.9    0.0016       5.6       1      32 [.     301     337 ..     301     346 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 1.5e-07
                 -TTT-S--SS-E..E-TTS--B-CHHHHHHHHC CS
    zf-C3HC4   1 CpiCleeakepn.elleCkHsfCskCirkilks 32 
                 C iC e  ++ +  +l+C+H++C +C+r++l++
  KHJ33318.1 138 CDICYEDDSDLQsFALKCGHRYCIHCYRHYLSQ 170
                 9*******9998899***************996 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.44
                 E-TTS--B-CHH CS
    zf-C3HC4  14 lleCkHsfCskC 25 
                 +  C+ +fC+ C
  KHJ33318.1 253 TCLCRYRFCFGC 264
                 778999*****9 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.051
                 HHHHCTSSB--TTT CS
    zf-C3HC4  28 kilksrkkvkCPlC 41 
                 ++++  ++++CP C
  KHJ33318.1 292 NWIS-ANTKECPRC 304
                 7888.88888**** PP

  == domain 4  score: 6.9 bits;  conditional E-value: 0.0016
                 -TTT-S--SS-E......E-TTS--B-CHHHHHHHHC CS
    zf-C3HC4   1 CpiCleeakepn.....elleCkHsfCskCirkilks 32 
                 Cp C ++++++      +  +CkH+fC +C+  + + 
  KHJ33318.1 301 CPRCNSTIEKNGgcnhmTCRKCKHEFCWMCMGLWSEH 337
                 999****9999899999999***********988874 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   5.0   2.7e-07   0.00096       2      37 ..     137     171 ..     136     194 .. 0.84
   2 ?   -1.6  10.6      0.97   3.5e+03       7      43 ..     242     304 ..     236     305 .. 0.66
   3 ?    4.0  14.7     0.017        62       2      40 ..     300     344 ..     299     345 .. 0.73

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 2.7e-07
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrss 37 
                 +C IC+e+ s+ +s   l+CgH ++ +C +++l ++
  KHJ33318.1 137 MCDICYEDDSDLQSFA-LKCGHRYCIHCYRHYLSQK 171
                 8****96666555555.56***********999765 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.97
   zf-RING_2   7 leelssadsvlllpCgHvfhreCl............erwlrssst..............CPlC 43 
                  ++l++   ++++ C++ f++ C             ++wl++++               CP C
  KHJ33318.1 242 KKDLDKVVPTVTCLCRYRFCFGCGladhqpapcelvKKWLKKCEDdsetanwisantkeCPRC 304
                 55555444555445*9*******7688888888888666666655566666666666678877 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.017
   zf-RING_2   2 eCpICleelssads...vlllpCgHvfhreClerwlrssst...C 40 
                 eCp C + ++++     +++ +C+H f++ C+  w ++  +   C
  KHJ33318.1 300 ECPRCNSTIEKNGGcnhMTCRKCKHEFCWMCMGLWSEHGTSwynC 344
                 8****99997665523333447**********9999877664444 PP

>> UN_NPL4  Nuclear pore localisation protein NPL4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       2.2     8e+03       8      23 ..     180     196 ..     179     200 .. 0.70
   2 !   16.0   0.0   3.5e-06     0.012       3      64 ..     394     454 ..     392     459 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2.2
                 EEEE.TTEEEEEEE-TT CS
     UN_NPL4   8 RvqS.adGikRieisek 23 
                 R+q  ++G kRi   ++
  KHJ33318.1 180 RIQCaKEGCKRIMDAKS 196
                 6774269****976665 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 3.5e-06
                 ---EEEEEETTEEEEEEE-TTSBHHHHHHHHHHHSS-STTT-EEESSTTCGCCCSSSSSSCC CS
     UN_NPL4   3 eeiiiRvqSadGikRieisekstlktllekvaeelkfsengfslylernkttelvssssksv 64 
                 e+ ++  qSa+ ++ ie++   t+++ l++ ++ lk + + f+ yl rn  te+  +++k +
  KHJ33318.1 394 EKKMVQLQSASCMSWIEVQYLNTASQALQSCRQTLKWT-YAFAFYLARNNLTEIFEDNQKDL 454
                 7788999******************************9.***************86666666 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   4.7   3.6e-06     0.013       1      34 [.     137     171 ..     137     173 .. 0.85
   2 ?    4.5   1.9    0.0086        31      12      29 ..     250     267 ..     243     274 .. 0.85
   3 ?    0.5   0.6      0.15   5.4e+02      32      40 .]     295     304 ..     290     304 .. 0.71
   4 ?   -1.7  16.8      0.78   2.8e+03      12      30 ..     316     334 ..     300     340 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.6e-06
  zf-C3HC4_2   1 kCpiCldmlkdpsvvt..pCgHvfCqkCilrsLeek 34 
                 +C iC++  +d   ++  +CgH++C  C + +L++k
  KHJ33318.1 137 MCDICYEDDSDL-QSFalKCGHRYCIHCYRHYLSQK 171
                 8*****998884.44447**************9986 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0086
  zf-C3HC4_2  12 psvvtpCgHvfCqkCilr 29 
                 p+v+  C  +fC  C l 
  KHJ33318.1 250 PTVTCLCRYRFCFGCGLA 267
                 77889**********875 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.15
  zf-C3HC4_2  32 eekn.eCPlC 40 
                 +++  eCP C
  KHJ33318.1 295 SANTkECPRC 304
                 55555****9 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 0.78
  zf-C3HC4_2  12 psvvtpCgHvfCqkCilrs 30 
                  ++  +C+H fC +C+  +
  KHJ33318.1 316 HMTCRKCKHEFCWMCMGLW 334
                 3566799999999998664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (519 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1254  (0.0699426); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3561.25
//
Query:       KHJ33319.1  [L=328]
Description: putative oxidation resistance protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-27   94.2   0.3      1e-14   55.0   0.0    2.9  3  TLD       TLD


Domain annotation for each model (and alignments):
>> TLD  TLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1     0.094   1.7e+03      96     122 ..      62      91 ..      54     104 .. 0.71
   2 !   35.5   0.0   5.8e-13     1e-08       2      63 ..     133     197 ..     132     217 .. 0.93
   3 !   55.0   0.0   5.6e-19     1e-14      66     139 .]     255     327 ..     245     327 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.094
         TLD  96 fsLwidsslekgtsrhs..etfe.ngllsg 122
                  s   ++++++g +++   +++  +++l++
  KHJ33319.1  62 GSVSFNDDFDDGFCSQAkrTSYFpSPSLCP 91 
                 566789999999999988855551556664 PP

  == domain 2  score: 35.5 bits;  conditional E-value: 5.8e-13
         TLD   2 lyssskdgsslstllekie....nkgptlllikdekkyifGaflsqpwkssnkkfygdsesflfsl 63 
                 +ys +kdg  l tl++k+     ++g+++l+++d ++++fGa+l++  + + + f+g++e+fl+  
  KHJ33319.1 133 VYSLEKDGACLGTLYKKCSelegGQGGFVLVVEDGRGDLFGAYLNEAPRVEPN-FFGNGECFLWRA 197
                 7*********************999***********************99998.*********976 PP

  == domain 3  score: 55.0 bits;  conditional E-value: 5.6e-19
         TLD  66 kfkvykstgknkaylntssdglgfGggqpkfsLwidsslekgtsrhsetfengllsgaseerfkikdiEVWglg 139
                 +fk +  +g n++ ++++ ++l++Ggg+++++Lw+d+++++g s+h+ tf+n++ls ++ e+f++  +EVW+lg
  KHJ33319.1 255 RFKAFPFSGVNDYLMLCEANYLSIGGGDGHYGLWLDDTFDRGISSHCLTFGNEPLS-EEGEKFEVIGVEVWSLG 327
                 688999999***********************************************.59************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       281  (0.0156729); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2357.14
//
Query:       KHJ33320.1  [L=1417]
Description: putative translation repressor antiviral protein ski3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.6e-28   96.7  13.7    4.8e-06   27.1   0.0    9.0 10  TPR_16      Tetratricopeptide repeat
    7.7e-24   82.4  20.7      0.014   16.2   0.1   14.2 14  TPR_14      Tetratricopeptide repeat
    1.3e-23   81.1  48.2     0.0016   18.4   0.1   17.2 18  TPR_2       Tetratricopeptide repeat
    1.9e-21   74.4  37.9     0.0024   17.9   0.0   15.7 16  TPR_8       Tetratricopeptide repeat
    3.5e-20   72.3  18.0     0.0015   19.0   1.5   11.2 10  TPR_19      Tetratricopeptide repeat
    1.3e-19   69.1  22.6      0.073   13.5   0.0   15.1 16  TPR_17      Tetratricopeptide repeat
    9.6e-19   66.4  48.8    6.3e-05   22.6   0.1   14.7 16  TPR_1       Tetratricopeptide repeat
    2.4e-15   55.9  13.5      0.023   14.4   0.0   10.9 10  TPR_11      TPR repeat
      4e-15   55.9  39.2       0.01   16.1   0.0   13.1 11  TPR_12      Tetratricopeptide repeat
    6.3e-10   39.0  21.9       0.11   13.2   0.0   12.4 12  TPR_6       Tetratricopeptide repeat
    5.7e-08   32.8   7.6       0.51   10.5   0.0    6.6  6  TPR_9       Tetratricopeptide repeat
    5.8e-07   29.1  27.0      0.013   15.5   0.1   12.6 12  TPR_7       Tetratricopeptide repeat
    0.00013   22.1  28.9      0.012   15.9   1.1    8.7 10  ANAPC3      Anaphase-promoting complex, cyclosome, subunit 3
     0.0015   18.6   0.0     0.0045   17.1   0.0    1.9  1  TPR_22      Tetratricopeptide repeat
     0.0033   16.7   8.8       0.15   11.3   0.1    5.1  5  TPR_15      Tetratricopeptide repeat
     0.0039   16.3   0.6          6    5.8   0.1    4.0  4  ChAPs       ChAPs (Chs5p-Arf1p-binding proteins)
     0.0045   17.0  13.5        7.7    6.7   0.1    7.4  7  Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
     0.0064   16.8   5.3       0.86   10.0   0.0    5.6  5  TPR_20      Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.049   14.1   9.8       0.19   12.2   0.0    4.3  4  BTAD        Bacterial transcriptional activator domain
      0.095   12.7   8.6        8.1    6.6   0.2    4.9  4  TPR_3       Tetratricopeptide repeat
       0.41   10.1   4.1       0.79    9.2   0.0    3.6  5  SHNi-TPR    SHNi-TPR
       0.45   10.6  12.0         59    3.8   0.0    7.1  8  MIT         MIT (microtubule interacting and transport) domai
        9.6    6.2  19.8        8.9    6.3   0.1    7.8  7  TPR_10      Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   6.2e-09   4.8e-06      10      68 .]      17      72 ..       9      72 .. 0.96
   2 !   21.7   0.0     3e-07   0.00023      12      62 ..     439     486 ..     417     491 .. 0.91
   3 ?    3.2   0.0      0.18   1.4e+02      15      51 ..     594     627 ..     590     628 .. 0.89
   4 !   15.9   0.0     2e-05     0.015       2      46 ..     659     700 ..     658     714 .. 0.91
   5 ?    1.2   0.2      0.79   6.2e+02      34      55 ..     729     750 ..     702     764 .. 0.71
   6 ?    0.3   0.1       1.5   1.1e+03       1      24 [.     733     756 ..     733     778 .. 0.70
   7 !   17.3   0.0   7.1e-06    0.0055       2      61 ..     993    1050 ..     992    1056 .. 0.88
   8 !    9.1   0.3    0.0026       2.1       9      66 ..    1161    1229 ..    1154    1231 .. 0.81
   9 !    8.4   0.2    0.0044       3.4       1      49 [.    1201    1246 ..    1201    1249 .. 0.93
  10 ?   -1.2   0.0       4.4   3.4e+03      21      44 ..    1258    1278 ..    1235    1284 .. 0.54

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 6.2e-09
      TPR_16 10 agdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapdap 68
                  +y+dA+a  + +++++   P+++ Al +lg a+ ++  +++A++ yr a++  p++p
  KHJ33320.1 17 TERYEDAVADCRDLIAAH---PRNYLALVFLGFALSKLDKYQDAEETYRLAIQVKPNEP 72
                579***************...********************************999987 PP

  == domain 2  score: 21.7 bits;  conditional E-value: 3e-07
      TPR_16  12 dyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalr 62 
                 + ++A   +e +l+rd   P    Al + g+++ +  ++++A++++++al+
  KHJ33320.1 439 NHPEAKSIFENLLERD---PSSTPALIGIGLIYEEEEDYDAAIEFFDRALK 486
                 688999**********...******************************95 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.18
      TPR_16  15 dAaaaleaalkrdpssPdaaeAllllgdaalrqgrla 51 
                 +A++ ++ a ++    +    A+  l++++++qg+++
  KHJ33320.1 594 RARKCFQKAFELS---SSEISAAERLARIFAEQGEWE 627
                 89999*9999999...88889*************987 PP

  == domain 4  score: 15.9 bits;  conditional E-value: 2e-05
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalr 46 
                 ala a l+  dy + +a ++aal+     Pd+++++ +lg+++  
  KHJ33320.1 659 ALAVAELNKHDYGKSIASFQAALRIS---PDDYHSWVGLGESYHN 700
                 789999********************...************9975 PP

  == domain 5  score: 1.2 bits;  conditional E-value: 0.79
      TPR_16  34 aeAllllgdaalrqgrlaeAaa 55 
                 + + + l+++  ++ +++eA+a
  KHJ33320.1 729 WLSKYMLANVNRELANYDEAIA 750
                 5566777777777777777775 PP

  == domain 6  score: 0.3 bits;  conditional E-value: 1.5
      TPR_16   1 lalaraalragdyddAaaaleaal 24 
                 ++la+  +++ +yd+A+a ++ +l
  KHJ33320.1 733 YMLANVNRELANYDEAIAGYQGVL 756
                 667777777777777777666655 PP

  == domain 7  score: 17.3 bits;  conditional E-value: 7.1e-06
      TPR_16    2 alaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaal.rqgrlaeAaalyraal 61  
                  +l++++l + dy  A +a+++a  +d   Pd a+A+ + g +a    g+++eA  ly  al
  KHJ33320.1  993 NLGTLYLLQSDYLLANEAFTRAQSSD---PDFAHAWVGQGILAIiLTGDMKEAHTLYTHAL 1050
                  68999999******************...**************966699999977776655 PP

  == domain 8  score: 9.1 bits;  conditional E-value: 0.0026
      TPR_16    9 ragdyddAaaaleaalkrdpssPd...........aaeAllllgdaalrqgrlaeAaalyraalraapd 66  
                   +g yd+A++  e+al + +++             +  A+l+ g+a++ +g  + A+++++ al+++ +
  KHJ33320.1 1161 SLGFYDEAIENGEIALQLSAEDAGnkiseesrqkcRLSAYLAVGLAHYNLGQIDSALQYFLPALEESNN 1229
                  56778888888888888887777788888888888889**********************988877765 PP

  == domain 9  score: 8.4 bits;  conditional E-value: 0.0044
      TPR_16    1 lalaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgr 49  
                  la ++a++++g+ d A+ ++  al+       + +A  ll++++++qg+
  KHJ33320.1 1201 LAVGLAHYNLGQIDSALQYFLPALEES---NNNSRAVCLLAQVLWAQGD 1246
                  57899**********************...88999************98 PP

  == domain 10  score: -1.2 bits;  conditional E-value: 4.4
      TPR_16   21 eaalkrdpssPdaaeAllllgdaa 44  
                     ++++   Pd++e  lllg +a
  KHJ33320.1 1258 FDCIESH---PDHVECILLLGIIA 1278
                  4555666...77777777777666 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00092      0.72       1      43 [.       4      46 ..       4      47 .. 0.93
   2 !   11.9   0.0   0.00043      0.34       7      44 .]      44      81 ..      40      81 .. 0.90
   3 ?    2.9   0.0      0.31   2.5e+02       3      38 ..     425     461 ..     423     467 .. 0.81
   4 !   14.3   0.3   6.9e-05     0.054       7      42 ..     464     499 ..     459     501 .. 0.91
   5 ?    2.3   0.0      0.53   4.1e+02      13      41 ..     553     581 ..     549     584 .. 0.85
   6 ?    2.9   0.0      0.33   2.6e+02       6      44 .]     580     619 ..     575     619 .. 0.82
   7 !   11.4   0.0   0.00062      0.49       4      42 ..     657     695 ..     654     697 .. 0.90
   8 ?    3.6   0.0      0.19   1.5e+02       5      28 ..     733     756 ..     729     772 .. 0.81
   9 ?   -1.1   0.0       6.3   4.9e+03      12      26 ..     843     857 ..     839     859 .. 0.87
  10 ?    3.9   0.0      0.16   1.2e+02       8      42 ..     927     962 ..     921     964 .. 0.78
  11 ?    0.4   0.1       2.1   1.6e+03       4      39 ..     991    1026 ..     988    1031 .. 0.83
  12 ?   -0.3   0.0       3.5   2.7e+03       7      34 ..    1155    1182 ..    1151    1184 .. 0.79
  13 !   16.2   0.1   1.8e-05     0.014       3      43 ..    1199    1239 ..    1197    1240 .. 0.96
  14 ?    7.2   0.0     0.014        11       6      42 ..    1236    1275 ..    1232    1277 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00092
      TPR_14  1 peallalaeallalGdpdeAiallrralalaPddaeawlllaq 43
                p+a l+l e+    +++++A+a +r+++a++P +  a+ +l++
  KHJ33320.1  4 PKAILKLIEVSIKTERYEDAVADCRDLIAAHPRNYLALVFLGF 46
                578899999999**************************99986 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00043
      TPR_14  7 laeallalGdpdeAiallrralalaPddaeawlllaql 44
                l+ al  l+++++A++ +r a++  P++++aw  l +l
  KHJ33320.1 44 LGFALSKLDKYQDAEETYRLAIQVKPNEPQAWQGLIKL 81
                7889999*************************999875 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.31
      TPR_14   3 allalaeallalG.dpdeAiallrralalaPddaeaw 38 
                 all  a +++++  ++ eA  +++ +l+++P++  a+
  KHJ33320.1 425 ALLGTALVYYQSPkNHPEAKSIFENLLERDPSSTPAL 461
                 67777888888853899**************997776 PP

  == domain 4  score: 14.3 bits;  conditional E-value: 6.9e-05
      TPR_14   7 laeallalGdpdeAiallrralalaPddaeawllla 42 
                 ++ ++++ +d+d+Ai+ ++ral++  ++ +++ ++a
  KHJ33320.1 464 IGLIYEEEEDYDAAIEFFDRALKKEAGNIRVRAEYA 499
                 57789***************************9998 PP

  == domain 5  score: 2.3 bits;  conditional E-value: 0.53
      TPR_14  13 alGdpdeAiallrralalaPddaeawlll 41 
                 ++ d ++A a++ +al+++ ++a a++ l
  KHJ33320.1 553 NRKDRKGAYAYFLAALKTNLNFAPAYTIL 581
                 6778999************9999998766 PP

  == domain 6  score: 2.9 bits;  conditional E-value: 0.33
      TPR_14   6 alaealla.lGdpdeAiallrralalaPddaeawlllaql 44 
                  l+ +++    d ++A++++++a +l  ++  a  +la++
  KHJ33320.1 580 ILGIFYADyCKDKKRARKCFQKAFELSSSEISAAERLARI 619
                 566666653578899**********************985 PP

  == domain 7  score: 11.4 bits;  conditional E-value: 0.00062
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawllla 42 
                 ++ala a+l+  d+ ++ia +++al+  Pdd   w  l+
  KHJ33320.1 657 HAALAVAELNKHDYGKSIASFQAALRISPDDYHSWVGLG 695
                 689****************************88877776 PP

  == domain 8  score: 3.6 bits;  conditional E-value: 0.19
      TPR_14   5 lalaeallalGdpdeAiallrral 28 
                 ++la + ++l ++deAia ++ +l
  KHJ33320.1 733 YMLANVNRELANYDEAIAGYQGVL 756
                 89***************9777655 PP

  == domain 9  score: -1.1 bits;  conditional E-value: 6.3
      TPR_14  12 lalGdpdeAiallrr 26 
                 l++G+ deA +++ +
  KHJ33320.1 843 LRAGNNDEAYDIFSE 857
                 689*******99876 PP

  == domain 10  score: 3.9 bits;  conditional E-value: 0.16
      TPR_14   8 aeallal.GdpdeAiallrralalaPddaeawllla 42 
                 a+a  ++ + ++ Ai++++r ++   ++ e+w +l+
  KHJ33320.1 927 ADAKNRSsRYLKVAIRCFKRSIEIEAGNSEFWNALG 962
                 5555444144688*******************9997 PP

  == domain 11  score: 0.4 bits;  conditional E-value: 2.1
      TPR_14    4 llalaeallalGdpdeAiallrralalaPddaeawl 39  
                  +  l+ ++l + d+  A +++ ra + +Pd+a aw 
  KHJ33320.1  991 WSNLGTLYLLQSDYLLANEAFTRAQSSDPDFAHAWV 1026
                  66678888888888889999************9996 PP

  == domain 12  score: -0.3 bits;  conditional E-value: 3.5
      TPR_14    7 laeallalGdpdeAiallrralalaPdd 34  
                  +a+  l lG +deAi+  + al+l  +d
  KHJ33320.1 1155 IARCQLSLGFYDEAIENGEIALQLSAED 1182
                  6778899********9877777776665 PP

  == domain 13  score: 16.2 bits;  conditional E-value: 1.8e-05
      TPR_14    3 allalaeallalGdpdeAiallrralalaPddaeawlllaq 43  
                  a+la + a+++lG+ d A++++  al+   ++ +a  llaq
  KHJ33320.1 1199 AYLAVGLAHYNLGQIDSALQYFLPALEESNNNSRAVCLLAQ 1239
                  89999***********************************9 PP

  == domain 14  score: 7.2 bits;  conditional E-value: 0.014
      TPR_14    6 alaeallalGd...pdeAiallrralalaPddaeawllla 42  
                  +la++l+a+Gd    + A+ +l ++++ +Pd+ e  lll+
  KHJ33320.1 1236 LLAQVLWAQGDkgsRESARSYLFDCIESHPDHVECILLLG 1275
                  69*******98777888***************99888886 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0      0.37   2.9e+02      12      34 .]      15      37 ..      12      37 .. 0.88
   2 !   15.4   0.1   1.9e-05     0.015       3      33 ..      40      70 ..      38      71 .. 0.94
   3 ?   -1.6   0.0       5.1   3.9e+03      21      30 ..     130     139 ..     127     140 .. 0.74
   4 ?    1.4   0.0      0.58   4.5e+02      15      33 ..     438     456 ..     425     457 .. 0.89
   5 !   18.4   0.1     2e-06    0.0016       3      30 ..     460     487 ..     459     491 .. 0.91
   6 ?   -0.1   0.3       1.8   1.4e+03      14      31 ..     554     571 ..     552     574 .. 0.84
   7 !    7.8   0.1     0.005       3.9      14      31 ..     589     606 ..     581     608 .. 0.88
   8 ?   -2.1   0.0       7.6   5.9e+03       6      18 ..     615     627 ..     612     628 .. 0.88
   9 !   13.7   0.0   6.7e-05     0.052       4      34 .]     657     687 ..     656     687 .. 0.94
  10 ?   -1.0   0.1       3.3   2.6e+03       4      31 ..     691     718 ..     689     720 .. 0.81
  11 ?    5.3   0.3     0.033        25       5      25 ..     733     753 ..     729     756 .. 0.88
  12 ?   -0.4   0.1       2.2   1.7e+03      18      30 ..     791     803 ..     790     806 .. 0.88
  13 ?   -1.0   0.1       3.3   2.5e+03       2      14 ..     909     921 ..     908     924 .. 0.86
  14 ?    1.2   0.0      0.65   5.1e+02      18      31 ..     938     951 ..     932     954 .. 0.82
  15 !   12.0   0.0   0.00023      0.18       1      33 [.     988    1020 ..     988    1021 .. 0.94
  16 ?    2.8   0.0       0.2   1.6e+02      14      30 ..    1036    1052 ..    1032    1053 .. 0.90
  17 ?    6.2   0.1     0.017        13       6      31 ..    1154    1179 ..    1149    1182 .. 0.87
  18 !   12.7   0.2   0.00014      0.11       3      34 .]    1199    1230 ..    1198    1230 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.37
       TPR_2 12 yklgdyeeAleafekAleldPnn 34
                +k  +ye+A+++++  ++  P+n
  KHJ33320.1 15 IKTERYEDAVADCRDLIAAHPRN 37
                6789***********99999976 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 1.9e-05
       TPR_2  3 alynlGlayyklgdyeeAleafekAleldPn 33
                al  lG a+ kl++y++A+e ++ A++  Pn
  KHJ33320.1 40 ALVFLGFALSKLDKYQDAEETYRLAIQVKPN 70
                7889***********************9998 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 5.1
       TPR_2  21 leafekAlel 30 
                 +  ++kAlel
  KHJ33320.1 130 RTQYKKALEL 139
                 5678888887 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.58
       TPR_2  15 gdyeeAleafekAleldPn 33 
                 +++ eA+  fe  le dP 
  KHJ33320.1 438 KNHPEAKSIFENLLERDPS 456
                 6889*************96 PP

  == domain 5  score: 18.4 bits;  conditional E-value: 2e-06
       TPR_2   3 alynlGlayyklgdyeeAleafekAlel 30 
                 al  +Gl+y++  dy+ A+e+f++Al+ 
  KHJ33320.1 460 ALIGIGLIYEEEEDYDAAIEFFDRALKK 487
                 68899*********************97 PP

  == domain 6  score: -0.1 bits;  conditional E-value: 1.8
       TPR_2  14 lgdyeeAleafekAleld 31 
                 ++d + A ++f +Al+ +
  KHJ33320.1 554 RKDRKGAYAYFLAALKTN 571
                 688899*********966 PP

  == domain 7  score: 7.8 bits;  conditional E-value: 0.005
       TPR_2  14 lgdyeeAleafekAleld 31 
                  +d ++A+++f+kA el 
  KHJ33320.1 589 CKDKKRARKCFQKAFELS 606
                 6899**********9995 PP

  == domain 8  score: -2.1 bits;  conditional E-value: 7.6
       TPR_2   6 nlGlayyklgdye 18 
                 +l+++ +++g++e
  KHJ33320.1 615 RLARIFAEQGEWE 627
                 89*********97 PP

  == domain 9  score: 13.7 bits;  conditional E-value: 6.7e-05
       TPR_2   4 lynlGlayyklgdyeeAleafekAleldPnn 34 
                 + +l+ a +++ dy + ++ f++Al++ P++
  KHJ33320.1 657 HAALAVAELNKHDYGKSIASFQAALRISPDD 687
                 5689*************************97 PP

  == domain 10  score: -1.0 bits;  conditional E-value: 3.3
       TPR_2   4 lynlGlayyklgdyeeAleafekAleld 31 
                 +  lG++y + g+   A +a+  A +l+
  KHJ33320.1 691 WVGLGESYHNCGRNMAATKALLHAQKLE 718
                 8899****99999888888888877775 PP

  == domain 11  score: 5.3 bits;  conditional E-value: 0.033
       TPR_2   5 ynlGlayyklgdyeeAleafe 25 
                 y+l+++ ++l +y+eA++ ++
  KHJ33320.1 733 YMLANVNRELANYDEAIAGYQ 753
                 99**************98765 PP

  == domain 12  score: -0.4 bits;  conditional E-value: 2.2
       TPR_2  18 eeAleafekAlel 30 
                 e+A+ea e+Al l
  KHJ33320.1 791 ERAVEAIEEALLL 803
                 79*********87 PP

  == domain 13  score: -1.0 bits;  conditional E-value: 3.3
       TPR_2   2 ealynlGlayykl 14 
                  a ynlG++ yk+
  KHJ33320.1 909 IAFYNLGWIEYKA 921
                 589******9985 PP

  == domain 14  score: 1.2 bits;  conditional E-value: 0.65
       TPR_2  18 eeAleafekAleld 31 
                 + A+++f++++e++
  KHJ33320.1 938 KVAIRCFKRSIEIE 951
                 67*********986 PP

  == domain 15  score: 12.0 bits;  conditional E-value: 0.00023
       TPR_2    1 aealynlGlayyklgdyeeAleafekAleldPn 33  
                  a+ + nlG +y+ + dy  A eaf +A + dP+
  KHJ33320.1  988 AQTWSNLGTLYLLQSDYLLANEAFTRAQSSDPD 1020
                  678**************************9998 PP

  == domain 16  score: 2.8 bits;  conditional E-value: 0.2
       TPR_2   14 lgdyeeAleafekAlel 30  
                   gd +eA+ ++  Ale+
  KHJ33320.1 1036 TGDMKEAHTLYTHALEI 1052
                  6999***********98 PP

  == domain 17  score: 6.2 bits;  conditional E-value: 0.017
       TPR_2    6 nlGlayyklgdyeeAleafekAleld 31  
                   ++++ + lg y+eA+e  e Al+l 
  KHJ33320.1 1154 DIARCQLSLGFYDEAIENGEIALQLS 1179
                  67999***************999996 PP

  == domain 18  score: 12.7 bits;  conditional E-value: 0.00014
       TPR_2    3 alynlGlayyklgdyeeAleafekAleldPnn 34  
                  a+ + Gla+y+lg+ + Al++f  Ale   nn
  KHJ33320.1 1199 AYLAVGLAHYNLGQIDSALQYFLPALEESNNN 1230
                  78899*****************9888877765 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       7.3   5.7e+03      12      28 ..      15      31 ..      13      35 .. 0.83
   2 !   13.2   0.1    0.0001     0.081       3      33 ..      40      70 ..      38      71 .. 0.93
   3 ?    1.1   0.0       0.8   6.2e+02      15      33 ..     438     456 ..     430     457 .. 0.84
   4 !   17.9   0.0   3.1e-06    0.0024       2      29 ..     459     486 ..     458     486 .. 0.93
   5 ?   -2.2   0.1       8.9     7e+03      15      30 ..     555     570 ..     552     573 .. 0.80
   6 !   10.9   0.2   0.00055      0.43       1      32 [.     575     607 ..     575     609 .. 0.92
   7 !    8.8   0.0    0.0027       2.1       7      34 .]     660     687 ..     657     687 .. 0.88
   8 ?    6.8   0.0     0.011       8.8       2      33 ..     689     720 ..     688     721 .. 0.93
   9 ?    4.5   0.2     0.065        50       5      22 ..     733     750 ..     731     756 .. 0.90
  10 ?   -1.3   0.1       4.5   3.5e+03      18      29 ..     791     802 ..     790     804 .. 0.86
  11 ?   -0.5   0.0       2.6     2e+03      17      32 ..     937     952 ..     928     954 .. 0.85
  12 !    8.6   0.0    0.0031       2.5       1      33 [.     988    1020 ..     988    1021 .. 0.96
  13 ?    1.5   0.0      0.58   4.5e+02       4      31 ..    1025    1053 ..    1022    1053 .. 0.76
  14 ?   -1.1   0.0       3.9     3e+03       7      22 ..    1155    1170 ..    1153    1181 .. 0.85
  15 !   11.4   0.1   0.00039       0.3       2      33 ..    1198    1229 ..    1197    1230 .. 0.89
  16 ?    1.2   0.0      0.72   5.6e+02       3      19 ..    1233    1249 ..    1231    1267 .. 0.59

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 7.3
                HHTT-HHHHHHHHHHHH CS
       TPR_8 12 lklgdyeeAkeyyekal 28
                +k+++ye A++ ++  +
  KHJ33320.1 15 IKTERYEDAVADCRDLI 31
                6889*******998765 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 0.0001
                HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  3 ayynlgsiylklgdyeeAkeyyekaleldpd 33
                a++ lg +++kl +y+ A+e+y+ a++ +p+
  KHJ33320.1 40 ALVFLGFALSKLDKYQDAEETYRLAIQVKPN 70
                67889************************98 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.8
                 T-HHHHHHHHHHHHHHHHH CS
       TPR_8  15 gdyeeAkeyyekaleldpd 33 
                 +++ eAk+ +e  le dp+
  KHJ33320.1 438 KNHPEAKSIFENLLERDPS 456
                 56669************96 PP

  == domain 4  score: 17.9 bits;  conditional E-value: 3.1e-06
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekale 29 
                 +a+  +g+iy++ +dy++A+e++ +al+
  KHJ33320.1 459 PALIGIGLIYEEEEDYDAAIEFFDRALK 486
                 57888*********************97 PP

  == domain 5  score: -2.2 bits;  conditional E-value: 8.9
                 T-HHHHHHHHHHHHHH CS
       TPR_8  15 gdyeeAkeyyekalel 30 
                 +d + A +y+  al+ 
  KHJ33320.1 555 KDRKGAYAYFLAALKT 570
                 67788999****9986 PP

  == domain 6  score: 10.9 bits;  conditional E-value: 0.00055
                 CCHHHHHHHHH.HHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiy.lklgdyeeAkeyyekaleldp 32 
                 a+ay  lg  y +  +d++ A ++++ka el+ 
  KHJ33320.1 575 APAYTILGIFYaDYCKDKKRARKCFQKAFELSS 607
                 689999**9999******************986 PP

  == domain 7  score: 8.8 bits;  conditional E-value: 0.0027
                 HHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   7 lgsiylklgdyeeAkeyyekaleldpdn 34 
                 l+ + l++ dy +++++++ al+++pd+
  KHJ33320.1 660 LAVAELNKHDYGKSIASFQAALRISPDD 687
                 777778999*****************96 PP

  == domain 8  score: 6.8 bits;  conditional E-value: 0.011
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ++++ lg  y++ g+  +A +++ +a +l+++
  KHJ33320.1 689 HSWVGLGESYHNCGRNMAATKALLHAQKLERE 720
                 79**************************9876 PP

  == domain 9  score: 4.5 bits;  conditional E-value: 0.065
                 HHHHHHHHHTT-HHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAke 22 
                 y+l+++ ++l +y+eA++
  KHJ33320.1 733 YMLANVNRELANYDEAIA 750
                 9***************97 PP

  == domain 10  score: -1.3 bits;  conditional E-value: 4.5
                 HHHHHHHHHHHH CS
       TPR_8  18 eeAkeyyekale 29 
                 e A+e++e+al 
  KHJ33320.1 791 ERAVEAIEEALL 802
                 89********96 PP

  == domain 11  score: -0.5 bits;  conditional E-value: 2.6
                 HHHHHHHHHHHHHHHH CS
       TPR_8  17 yeeAkeyyekaleldp 32 
                 ++ A+ ++++ +e++ 
  KHJ33320.1 937 LKVAIRCFKRSIEIEA 952
                 5679*********986 PP

  == domain 12  score: 8.6 bits;  conditional E-value: 0.0031
                  CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8    1 aeayynlgsiylklgdyeeAkeyyekaleldpd 33  
                  a+ + nlg +yl + dy  A e++ +a + dpd
  KHJ33320.1  988 AQTWSNLGTLYLLQSDYLLANEAFTRAQSSDPD 1020
                  689*****************************8 PP

  == domain 13  score: 1.5 bits;  conditional E-value: 0.58
                  HHHHHHHH.HHTT-HHHHHHHHHHHHHHH CS
       TPR_8    4 yynlgsiy.lklgdyeeAkeyyekaleld 31  
                  ++  g +  + +gd++eA   y +ale++
  KHJ33320.1 1025 WVGQGILAiILTGDMKEAHTLYTHALEIS 1053
                  555554444678***************95 PP

  == domain 14  score: -1.1 bits;  conditional E-value: 3.9
                  HHHHHHHTT-HHHHHH CS
       TPR_8    7 lgsiylklgdyeeAke 22  
                  ++++ l+lg y+eA+e
  KHJ33320.1 1155 IARCQLSLGFYDEAIE 1170
                  78899999*9****98 PP

  == domain 15  score: 11.4 bits;  conditional E-value: 0.00039
                  CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8    2 eayynlgsiylklgdyeeAkeyyekaleldpd 33  
                  +ay+  g+++ +lg++++A +y+  ale + +
  KHJ33320.1 1198 SAYLAVGLAHYNLGQIDSALQYFLPALEESNN 1229
                  69*********************999887665 PP

  == domain 16  score: 1.2 bits;  conditional E-value: 0.72
                  HHHHHHHHHHHTT-HHH CS
       TPR_8    3 ayynlgsiylklgdyee 19  
                  a ++l+++++ +gd+ +
  KHJ33320.1 1233 AVCLLAQVLWAQGDKGS 1249
                  55667777776666543 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1      0.42   3.3e+02      25      57 ..       4      36 ..       3      42 .. 0.78
   2 !   16.0   0.4   1.7e-05     0.013       5      64 ..      18      77 ..      14      81 .. 0.90
   3 ?    4.0   0.0     0.092        72      24      58 ..     422     457 ..     406     465 .. 0.70
   4 !   19.0   1.5   1.9e-06    0.0015       3      67 ..     470     535 ..     468     536 .. 0.88
   5 ?    0.5   0.0       1.2     9e+02       9      46 ..     594     631 ..     591     639 .. 0.83
   6 ?    6.5   0.0     0.016        12       6      55 ..     669     718 ..     665     725 .. 0.88
   7 ?    0.4   0.1       1.2   9.3e+02       6      37 ..     744     775 ..     740     776 .. 0.91
   8 ?    1.9   0.0      0.42   3.3e+02       3      45 ..    1000    1043 ..     990    1057 .. 0.74
   9 ?    4.1   0.0     0.084        65      26      46 ..    1150    1170 ..    1134    1171 .. 0.87
  10 !   16.0   0.1   1.6e-05     0.013       5      40 ..    1211    1246 ..    1209    1249 .. 0.96

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.42
      TPR_19 25 aearllLAeallalgqldeAealLdalpeedpd 57
                + a l L+e+ +++ ++++A a + +l ++ p 
  KHJ33320.1  4 PKAILKLIEVSIKTERYEDAVADCRDLIAAHPR 36
                678899**************9877766666665 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 1.7e-05
      TPR_19  5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddaryasL 64
                ++y++A+a  + ++++ p n  a+  L  al +l  +++Ae++   + + +p+++++++ 
  KHJ33320.1 18 ERYEDAVADCRDLIAAHPRNYLALVFLGFALSKLDKYQDAEETYRLAIQVKPNEPQAWQG 77
                79***************************************************9777643 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.092
      TPR_19  24 naearllLAeallal.gqldeAealLdalpeedpdd 58 
                 + +a+l+ A +++++ ++  eA+ + + l+e dp +
  KHJ33320.1 422 HIAALLGTALVYYQSpKNHPEAKSIFENLLERDPSS 457
                 556666667777777777777777777777777764 PP

  == domain 4  score: 19.0 bits;  conditional E-value: 1.9e-06
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLda.lpeedpddaryasLlAk 67 
                 +e+dy++A++++ +al+++++n ++r+ +A a   +g+++  ++ L + l e+d ++ +y++LlA+
  KHJ33320.1 470 EEEDYDAAIEFFDRALKKEAGNIRVRAEYAWAKALNGDFAMGKQELYKcLTEMDGKNLQYRDLLAQ 535
                 689************************************999988754277777778999999987 PP

  == domain 5  score: 0.5 bits;  conditional E-value: 1.2
      TPR_19   9 eAlalleqalqedpknaearllLAeallalgqldeAea 46 
                 +A + +++a++ +     a+ +LA++  ++g+++  e 
  KHJ33320.1 594 RARKCFQKAFELSSSEISAAERLARIFAEQGEWELVEV 631
                 6888899999999999999999*********9986555 PP

  == domain 6  score: 6.5 bits;  conditional E-value: 0.016
      TPR_19   6 dyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeed 55 
                 dy   +a +++al  +p++   + +L e + + g+  +A ++L  +++ +
  KHJ33320.1 669 DYGKSIASFQAALRISPDDYHSWVGLGESYHNCGRNMAATKALLHAQKLE 718
                 78888999***************************999999988777665 PP

  == domain 7  score: 0.4 bits;  conditional E-value: 1.2
      TPR_19   6 dyaeAlalleqalqedpknaearllLAealla 37 
                 +y+eA+a ++ +l +  +   + ++L++al++
  KHJ33320.1 744 NYDEAIAGYQGVLCQRKGEYGVSIALIQALVE 775
                 79*************99999999999999986 PP

  == domain 8  score: 1.9 bits;  conditional E-value: 0.42
      TPR_19    3 aegdyaeAlalleqalqedpknaearllLAeallal.gqldeAe 45  
                   + dy  A +++++a + dp+ a a+ +  ++ + l g+ +eA 
  KHJ33320.1 1000 LQSDYLLANEAFTRAQSSDPDFAHAWVGQGILAIILtGDMKEAH 1043
                  57788889999999999999999998876444433336666665 PP

  == domain 9  score: 4.1 bits;  conditional E-value: 0.084
      TPR_19   26 earllLAeallalgqldeAea 46  
                   ++ + A+++l+lg +deA++
  KHJ33320.1 1150 LIKSDIARCQLSLGFYDEAIE 1170
                  567789*************86 PP

  == domain 10  score: 16.0 bits;  conditional E-value: 1.6e-05
      TPR_19    5 gdyaeAlalleqalqedpknaearllLAeallalgq 40  
                  g+ ++Al+++  al+e+++n++a  lLA++l+a+g+
  KHJ33320.1 1211 GQIDSALQYFLPALEESNNNSRAVCLLAQVLWAQGD 1246
                  899*******************************97 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1     0.018        14       3      34 .]      28      59 ..      26      59 .. 0.92
   2 ?    4.6   0.0     0.066        52       2      29 ..      61      88 ..      60      92 .. 0.91
   3 !   10.9   0.0   0.00065       0.5       2      34 .]     447     479 ..     446     479 .. 0.95
   4 ?    5.3   0.0     0.039        30       2      32 ..     481     511 ..     480     513 .. 0.91
   5 ?    3.5   0.3      0.14   1.1e+02       2      33 ..     564     596 ..     563     597 .. 0.87
   6 ?   -0.9   0.0       3.5   2.8e+03       1      29 [.     598     626 ..     598     628 .. 0.87
   7 ?   -0.2   0.0       2.2   1.7e+03      13      32 ..     654     673 ..     649     675 .. 0.86
   8 !   13.5   0.0   9.4e-05     0.073       2      32 ..     677     707 ..     676     709 .. 0.95
   9 ?   -2.1   0.1       8.6   6.7e+03      17      33 ..     733     749 ..     731     750 .. 0.89
  10 ?    1.2   0.1      0.79   6.2e+02      13      26 ..     908     921 ..     892     929 .. 0.74
  11 !    9.9   0.0    0.0013      0.99       1      22 [.     943     964 ..     943     969 .. 0.91
  12 ?    5.7   0.2     0.029        23       4      29 ..     979    1004 ..     977    1008 .. 0.86
  13 ?   -0.3   0.0       2.3   1.8e+03       2      22 ..    1011    1031 ..    1010    1043 .. 0.79
  14 ?   -2.0   0.1         8   6.2e+03      20      33 ..    1204    1217 ..    1199    1218 .. 0.61
  15 ?    1.6   0.0      0.59   4.6e+02       5      28 ..    1223    1246 ..    1219    1251 .. 0.84
  16 ?    2.9   0.0      0.23   1.8e+02       5      28 ..    1260    1283 ..    1257    1290 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.018
      TPR_17  3 lkaleldPnnadaynnLAelllknGdlmtArq 34
                +  ++ +P n  a+  L+ +l+k+ ++++A++
  KHJ33320.1 28 RDLIAAHPRNYLALVFLGFALSKLDKYQDAEE 59
                678999************************96 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.066
      TPR_17  2 ylkaleldPnnadaynnLAelllknGdl 29
                y+ a++  Pn + a++ L +l++ +G+ 
  KHJ33320.1 61 YRLAIQVKPNEPQAWQGLIKLYEAQGND 88
                7889********************9985 PP

  == domain 3  score: 10.9 bits;  conditional E-value: 0.00065
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtArq 34 
                 +++ le+dP++ +a+   + ++++  d++ A++
  KHJ33320.1 447 FENLLERDPSSTPALIGIGLIYEEEEDYDAAIE 479
                 89****************************986 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.039
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                 + +al+++  n  +  ++A++ + nGd+++ 
  KHJ33320.1 481 FDRALKKEAGNIRVRAEYAWAKALNGDFAMG 511
                 89*************************9875 PP

  == domain 5  score: 3.5 bits;  conditional E-value: 0.14
      TPR_17   2 ylkaleldPnnadaynnLAelll.knGdlmtAr 33 
                 +l al+ + n a+ay+ L+ +++   +d+++Ar
  KHJ33320.1 564 FLAALKTNLNFAPAYTILGIFYAdYCKDKKRAR 596
                 889999999*************86778888887 PP

  == domain 6  score: -0.9 bits;  conditional E-value: 3.5
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdl 29 
                 +++ka el  +   a   LA++++++G++
  KHJ33320.1 598 CFQKAFELSSSEISAAERLARIFAEQGEW 626
                 788999999999999999********986 PP

  == domain 7  score: -0.2 bits;  conditional E-value: 2.2
      TPR_17  13 adaynnLAelllknGdlmtA 32 
                 ++++  LA++ l+++d+++ 
  KHJ33320.1 654 SWPHAALAVAELNKHDYGKS 673
                 788999**********9876 PP

  == domain 8  score: 13.5 bits;  conditional E-value: 9.4e-05
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                 ++ al++ P++  ++  L+e +++ G+ m A
  KHJ33320.1 677 FQAALRISPDDYHSWVGLGESYHNCGRNMAA 707
                 799*************************988 PP

  == domain 9  score: -2.1 bits;  conditional E-value: 8.6
      TPR_17  17 nnLAelllknGdlmtAr 33 
                 ++LA++ +++ ++++A+
  KHJ33320.1 733 YMLANVNRELANYDEAI 749
                 79999999999***998 PP

  == domain 10  score: 1.2 bits;  conditional E-value: 0.79
      TPR_17  13 adaynnLAelllkn 26 
                 + a++nL+++ +k+
  KHJ33320.1 908 SIAFYNLGWIEYKA 921
                 899*******9876 PP

  == domain 11  score: 9.9 bits;  conditional E-value: 0.0013
      TPR_17   1 lylkaleldPnnadaynnLAel 22 
                 ++++++e++  n++++n L+++
  KHJ33320.1 943 CFKRSIEIEAGNSEFWNALGVV 964
                 79*****************986 PP

  == domain 12  score: 5.7 bits;  conditional E-value: 0.029
      TPR_17    4 kaleldPnnadaynnLAelllknGdl 29  
                  ++l l+  +a  + nL++l+l + d+
  KHJ33320.1  979 RSLYLNERSAQTWSNLGTLYLLQSDY 1004
                  678888999************99887 PP

  == domain 13  score: -0.3 bits;  conditional E-value: 2.3
      TPR_17    2 ylkaleldPnnadaynnLAel 22  
                  +++a   dP+ a a+   + l
  KHJ33320.1 1011 FTRAQSSDPDFAHAWVGQGIL 1031
                  7899999********876665 PP

  == domain 14  score: -2.0 bits;  conditional E-value: 8
      TPR_17   20 AelllknGdlmtAr 33  
                  + +++++G+ + A+
  KHJ33320.1 1204 GLAHYNLGQIDSAL 1217
                  55566777776665 PP

  == domain 15  score: 1.6 bits;  conditional E-value: 0.59
      TPR_17    5 aleldPnnadaynnLAelllknGd 28  
                  ale   nn+ a ++LA++l  +Gd
  KHJ33320.1 1223 ALEESNNNSRAVCLLAQVLWAQGD 1246
                  789999***********9855555 PP

  == domain 16  score: 2.9 bits;  conditional E-value: 0.23
      TPR_17    5 aleldPnnadaynnLAelllknGd 28  
                  ++e +P++++   +L+ + l   d
  KHJ33320.1 1260 CIESHPDHVECILLLGIIALFDQD 1283
                  9***************99876555 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0       1.1   8.2e+02      14      25 ..      17      28 ..      14      37 .. 0.81
   2 !   18.6   0.1   1.5e-06    0.0011       3      33 ..      40      70 ..      38      71 .. 0.92
   3 ?   -3.0   0.0       9.7   7.6e+03       2      16 ..      73      87 ..      72      87 .. 0.89
   4 ?   -1.6   0.2       3.7   2.9e+03      24      30 ..     133     139 ..     132     140 .. 0.81
   5 !   22.6   0.1     8e-08   6.3e-05       3      29 ..     460     486 ..     459     491 .. 0.93
   6 ?    4.7   0.2     0.038        30      15      31 ..     590     606 ..     584     608 .. 0.87
   7 !   10.0   0.0   0.00076       0.6       6      34 .]     659     687 ..     655     687 .. 0.92
   8 ?    1.7   0.0      0.33   2.6e+02       4      31 ..     691     718 ..     689     720 .. 0.86
   9 ?    4.1   0.5     0.058        45       5      24 ..     733     752 ..     730     753 .. 0.89
  10 ?   -2.7   0.2       7.8   6.1e+03      18      29 ..     791     802 ..     790     803 .. 0.84
  11 ?   -0.3   0.1       1.4   1.1e+03       3      13 ..     910     920 ..     908     922 .. 0.84
  12 ?    1.7   0.0      0.33   2.6e+02      20      31 ..     940     951 ..     940     954 .. 0.90
  13 !   14.5   0.0   3.1e-05     0.024       1      34 []     988    1021 ..     988    1021 .. 0.96
  14 ?   -1.1   0.0       2.6     2e+03      15      30 ..    1037    1052 ..    1035    1053 .. 0.91
  15 ?   -0.3   0.0       1.4   1.1e+03       7      22 ..    1155    1170 ..    1151    1179 .. 0.81
  16 !   10.5   0.2   0.00054      0.42       3      28 ..    1199    1224 ..    1198    1230 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 1.1
                TT-HHHHHHHHH CS
       TPR_1 14 lgkydeAleyye 25
                 ++y++A+++++
  KHJ33320.1 17 TERYEDAVADCR 28
                689*******97 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 1.5e-06
                HHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1  3 alynlGnayfklgkydeAleyyekALelnPn 33
                al  lG a+ kl ky++A+e y+ A+++ Pn
  KHJ33320.1 40 ALVFLGFALSKLDKYQDAEETYRLAIQVKPN 70
                66679*************************8 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 9.7
                HHHHHHHHHHHHTT- CS
       TPR_1  2 kalynlGnayfklgk 16
                +a+ +l  +y  +g+
  KHJ33320.1 73 QAWQGLIKLYEAQGN 87
                7999999******97 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 3.7
                 HHHHHHH CS
       TPR_1  24 yekALel 30 
                 y+kALel
  KHJ33320.1 133 YKKALEL 139
                 8889887 PP

  == domain 5  score: 22.6 bits;  conditional E-value: 8e-08
                 HHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALe 29 
                 al ++G++y + ++yd A+e++++AL+
  KHJ33320.1 460 ALIGIGLIYEEEEDYDAAIEFFDRALK 486
                 7899**********************8 PP

  == domain 6  score: 4.7 bits;  conditional E-value: 0.038
                 T-HHHHHHHHHHHHHHS CS
       TPR_1  15 gkydeAleyyekALeln 31 
                 ++ + A ++++kA el 
  KHJ33320.1 590 KDKKRARKCFQKAFELS 606
                 78899********9985 PP

  == domain 7  score: 10.0 bits;  conditional E-value: 0.00076
                 HHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   6 nlGnayfklgkydeAleyyekALelnPnn 34 
                  l++a +++ +y + ++ ++ AL++ P++
  KHJ33320.1 659 ALAVAELNKHDYGKSIASFQAALRISPDD 687
                 589999*********************96 PP

  == domain 8  score: 1.7 bits;  conditional E-value: 0.33
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALeln 31 
                 + +lG  y++ g+   A ++   A +l+
  KHJ33320.1 691 WVGLGESYHNCGRNMAATKALLHAQKLE 718
                 899**********999999988887775 PP

  == domain 9  score: 4.1 bits;  conditional E-value: 0.058
                 HHHHHHHHHTT-HHHHHHHH CS
       TPR_1   5 ynlGnayfklgkydeAleyy 24 
                 y l+n+ ++l +ydeA++ y
  KHJ33320.1 733 YMLANVNRELANYDEAIAGY 752
                 889**************866 PP

  == domain 10  score: -2.7 bits;  conditional E-value: 7.8
                 HHHHHHHHHHHH CS
       TPR_1  18 deAleyyekALe 29 
                 + A+e+ e+AL 
  KHJ33320.1 791 ERAVEAIEEALL 802
                 7899******95 PP

  == domain 11  score: -0.3 bits;  conditional E-value: 1.4
                 HHHHHHHHHHH CS
       TPR_1   3 alynlGnayfk 13 
                 a+ynlG + +k
  KHJ33320.1 910 AFYNLGWIEYK 920
                 99****99887 PP

  == domain 12  score: 1.7 bits;  conditional E-value: 0.33
                 HHHHHHHHHHHS CS
       TPR_1  20 AleyyekALeln 31 
                 A+ ++++ +e++
  KHJ33320.1 940 AIRCFKRSIEIE 951
                 9*********96 PP

  == domain 13  score: 14.5 bits;  conditional E-value: 3.1e-05
                  HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1    1 akalynlGnayfklgkydeAleyyekALelnPnn 34  
                  a+++ nlG +y+ + +y  A e++ +A + +P++
  KHJ33320.1  988 AQTWSNLGTLYLLQSDYLLANEAFTRAQSSDPDF 1021
                  789**************************99996 PP

  == domain 14  score: -1.1 bits;  conditional E-value: 2.6
                  T-HHHHHHHHHHHHHH CS
       TPR_1   15 gkydeAleyyekALel 30  
                  g+ +eA   y  ALe+
  KHJ33320.1 1037 GDMKEAHTLYTHALEI 1052
                  899***********98 PP

  == domain 15  score: -0.3 bits;  conditional E-value: 1.4
                  HHHHHHHTT-HHHHHH CS
       TPR_1    7 lGnayfklgkydeAle 22  
                  ++ + ++lg ydeA+e
  KHJ33320.1 1155 IARCQLSLGFYDEAIE 1170
                  57788888889***98 PP

  == domain 16  score: 10.5 bits;  conditional E-value: 0.00054
                  HHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_1    3 alynlGnayfklgkydeAleyyekAL 28  
                  a+   G+a+++lg+ d Al+y+  AL
  KHJ33320.1 1199 AYLAVGLAHYNLGQIDSALQYFLPAL 1224
                  67788****************96555 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.4   0.00044      0.34       7      42 .]      51      86 ..      45      86 .. 0.91
   2 ?    2.1   0.0      0.21   1.6e+02      11      23 ..     127     139 ..     125     139 .. 0.85
   3 ?    4.0   0.2     0.053        41       1      23 [.     465     487 ..     465     495 .. 0.87
   4 ?    0.8   0.0       0.5   3.9e+02      13      42 .]     595     624 ..     593     624 .. 0.90
   5 !   14.4   0.0   2.9e-05     0.023       9      40 ..     669     700 ..     664     702 .. 0.93
   6 ?    0.5   0.2      0.66   5.1e+02       5      18 ..     740     753 ..     736     756 .. 0.77
   7 ?    4.3   0.0     0.043        33      13      37 ..     940     964 ..     937     967 .. 0.94
   8 ?    1.0   0.0      0.45   3.5e+02      23      41 ..     983    1001 ..     977    1002 .. 0.86
   9 ?    1.5   0.1      0.32   2.5e+02       6      28 ..    1161    1183 ..    1160    1184 .. 0.85
  10 !   11.3   0.2   0.00026      0.21       1      42 []    1204    1245 ..    1204    1245 .. 0.98

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00044
      TPR_11  7 qGkyeeAieaYkkAlkldPdnaeayynLGlayykqG 42
                + ky +A e Y+ A++ +P+ + a+ +L ++y +qG
  KHJ33320.1 51 LDKYQDAEETYRLAIQVKPNEPQAWQGLIKLYEAQG 86
                669***********************9999999998 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.21
      TPR_11  11 eeAieaYkkAlkl 23 
                 +++ ++YkkAl+l
  KHJ33320.1 127 NGSRTQYKKALEL 139
                 77899******98 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.053
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkl 23 
                 G +y e  +y++Aie + +Alk 
  KHJ33320.1 465 GLIYEEEEDYDAAIEFFDRALKK 487
                 78899999************985 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.5
      TPR_11  13 AieaYkkAlkldPdnaeayynLGlayykqG 42 
                 A ++++kA +l+++  +a   L+ ++++qG
  KHJ33320.1 595 ARKCFQKAFELSSSEISAAERLARIFAEQG 624
                 899***********9999999999999988 PP

  == domain 5  score: 14.4 bits;  conditional E-value: 2.9e-05
      TPR_11   9 kyeeAieaYkkAlkldPdnaeayynLGlayyk 40 
                 +y ++i+++++Al+++Pd+   + +LG+ y++
  KHJ33320.1 669 DYGKSIASFQAALRISPDDYHSWVGLGESYHN 700
                 7999**************************96 PP

  == domain 6  score: 0.5 bits;  conditional E-value: 0.66
      TPR_11   5 yeqGkyeeAieaYk 18 
                 +e+ +y+eAi+ Y+
  KHJ33320.1 740 RELANYDEAIAGYQ 753
                 566689****9998 PP

  == domain 7  score: 4.3 bits;  conditional E-value: 0.043
      TPR_11  13 AieaYkkAlkldPdnaeayynLGla 37 
                 Ai ++k+ +++   n e++++LG++
  KHJ33320.1 940 AIRCFKRSIEIEAGNSEFWNALGVV 964
                 9**********************87 PP

  == domain 8  score: 1.0 bits;  conditional E-value: 0.45
      TPR_11   23 ldPdnaeayynLGlayykq 41  
                  l++ +a  ++nLG +y+ q
  KHJ33320.1  983 LNERSAQTWSNLGTLYLLQ 1001
                  89999********999866 PP

  == domain 9  score: 1.5 bits;  conditional E-value: 0.32
      TPR_11    6 eqGkyeeAieaYkkAlkldPdna 28  
                  ++G y+eAie+ + Al+l+ ++a
  KHJ33320.1 1161 SLGFYDEAIENGEIALQLSAEDA 1183
                  5788*******999999988876 PP

  == domain 10  score: 11.3 bits;  conditional E-value: 0.00026
      TPR_11    1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykqG 42  
                  G a y +G+++ A++ +  Al+ +++n +a + L++++++qG
  KHJ33320.1 1204 GLAHYNLGQIDSALQYFLPALEESNNNSRAVCLLAQVLWAQG 1245
                  8899*************************************9 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.1    0.0025         2      14      75 ..      15      68 ..       5      70 .. 0.72
   2 ?    4.6   0.0     0.053        41      40      75 ..     418     454 ..     401     456 .. 0.80
   3 !   16.1   0.0   1.3e-05      0.01      16      73 ..     437     486 ..     422     486 .. 0.72
   4 ?    2.3   0.0      0.26   2.1e+02      21      62 ..     594     627 ..     577     638 .. 0.68
   5 !   10.2   0.2   0.00093      0.72       8      69 ..     659     719 ..     654     723 .. 0.87
   6 ?    5.7   0.1     0.024        19       8      30 ..     734     756 ..     728     777 .. 0.79
   7 ?    0.3   0.0       1.1   8.7e+02      31      57 ..     896     920 ..     889     927 .. 0.77
   8 !    8.3   0.3    0.0036       2.8      43      71 ..     986    1014 ..     975    1020 .. 0.84
   9 ?    5.0   0.0     0.038        29      15      32 ..    1035    1052 ..    1020    1057 .. 0.59
  10 ?    6.8   0.1      0.01         8       5      35 ..    1151    1181 ..    1147    1188 .. 0.83
  11 !    8.2   0.3    0.0039         3       4      60 ..    1198    1246 ..    1195    1249 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0025
      TPR_12 14 rrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75
                 + +ry++A + ++  ++++     p ++l   +l  Lg ++++l++y++A+e ++ a++++
  KHJ33320.1 15 IKTERYEDAVADCRDLIAAH-----PRNYL---ALVFLGFALSKLDKYQDAEETYRLAIQVK 68
                56667777777777776666.....55544...78999999999999999999999988775 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.053
      TPR_12  40 dhpltattlrnLgrlyral.gryeeAlelleealaia 75 
                 ++ + +++l + + +y+++ +++ eA +++e  l+++
  KHJ33320.1 418 NSSEHIAALLGTALVYYQSpKNHPEAKSIFENLLERD 454
                 55567889999999988777******99999887765 PP

  == domain 3  score: 16.1 bits;  conditional E-value: 1.3e-05
      TPR_12  16 lgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeala 73 
                  +++ eA +++e  le+         p    +l+++g +y++ ++y++A+e++ +al+
  KHJ33320.1 437 PKNHPEAKSIFENLLERD--------PSSTPALIGIGLIYEEEEDYDAAIEFFDRALK 486
                 455556666666665555........445679************************95 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.26
      TPR_12  21 eAlellekaleiarrllGpdhpltattlrnLgrlyralgrye 62 
                  A+++++ka e+ +         ++++   L+r++ ++g++e
  KHJ33320.1 594 RARKCFQKAFELSS--------SEISAAERLARIFAEQGEWE 627
                 47777777777772........35666666666666666665 PP

  == domain 5  score: 10.2 bits;  conditional E-value: 0.00093
      TPR_12   8 nlaavlrrlgrydeAlellekaleia.rrllGpdhpltattlrnLgrlyralgryeeAlelle 69 
                  la++++   +y ++++ +++al+i    +  + + ++ ++++n gr   a++ +  A++l +
  KHJ33320.1 659 ALAVAELNKHDYGKSIASFQAALRISpDDY--HSWVGLGESYHNCGRNMAATKALLHAQKLER 719
                 4999**********************8888..779************9988887777777665 PP

  == domain 6  score: 5.7 bits;  conditional E-value: 0.024
      TPR_12   8 nlaavlrrlgrydeAlellekal 30 
                  la+v r+l +ydeA++ ++ +l
  KHJ33320.1 734 MLANVNRELANYDEAIAGYQGVL 756
                 5999***********99998775 PP

  == domain 7  score: 0.3 bits;  conditional E-value: 1.1
      TPR_12  31 eiarrllGpdhpltattlrnLgrlyra 57 
                 +i++++   d+++ +++ +nLg++ ++
  KHJ33320.1 896 AIYTSA--NDKHAKSIAFYNLGWIEYK 920
                 567666..5566999********9776 PP

  == domain 8  score: 8.3 bits;  conditional E-value: 0.0036
      TPR_12   43 ltattlrnLgrlyralgryeeAlelleea 71  
                    a+t  nLg+ly+++ +y  A e++++a
  KHJ33320.1  986 RSAQTWSNLGTLYLLQSDYLLANEAFTRA 1014
                  47899999999999999999999999998 PP

  == domain 9  score: 5.0 bits;  conditional E-value: 0.038
      TPR_12   15 rlgrydeAlellekalei 32  
                    g++ eA +l+ +alei
  KHJ33320.1 1035 LTGDMKEAHTLYTHALEI 1052
                  256666666666666665 PP

  == domain 10  score: 6.8 bits;  conditional E-value: 0.01
      TPR_12    5 alnnlaavlrrlgrydeAlellekaleiarr 35  
                  + + +a + + lg ydeA+e+ e al++  +
  KHJ33320.1 1151 IKSDIARCQLSLGFYDEAIENGEIALQLSAE 1181
                  5567999999****************99855 PP

  == domain 11  score: 8.2 bits;  conditional E-value: 0.0039
      TPR_12    4 talnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgr 60  
                  +a+  ++++++ lg+ d Al+++  ale        +    +++ + L+++++a+g+
  KHJ33320.1 1198 SAYLAVGLAHYNLGQIDSALQYFLPALEES-----NN---NSRAVCLLAQVLWAQGD 1246
                  6787899*******************7766.....22...46788888888888887 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0         2   1.5e+03       3      32 ..       7      36 ..       5      37 .. 0.80
   2 ?    0.5   0.0       1.5   1.2e+03       3      28 ..      41      66 ..      40      70 .. 0.84
   3 !   13.2   0.0   0.00014      0.11       2      33 .]     425     457 ..     424     457 .. 0.92
   4 !   11.4   0.0   0.00051       0.4       2      29 ..     460     487 ..     459     491 .. 0.90
   5 ?    1.1   0.0      0.97   7.6e+02       3      19 ..     537     552 ..     535     555 .. 0.88
   6 ?   -0.8   0.1       3.9     3e+03      13      25 ..     582     601 ..     558     604 .. 0.65
   7 ?   -1.7   0.0       7.8   6.1e+03       9      32 ..     663     686 ..     660     687 .. 0.77
   8 ?    4.0   0.1      0.12        95       4      26 ..     733     755 ..     731     756 .. 0.88
   9 ?   -0.9   0.0       4.5   3.5e+03       2      13 ..     910     921 ..     910     942 .. 0.75
  10 ?    1.5   0.0      0.75   5.8e+02       5      32 ..     993    1020 ..     993    1020 .. 0.92
  11 ?    4.9   0.2     0.061        48       2      23 ..    1199    1220 ..    1198    1221 .. 0.93
  12 ?    1.9   0.0      0.55   4.3e+02      10      33 .]    1241    1267 ..    1232    1267 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 2
                HHHHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6  3 lyklalsyrklgdtdkAlealerlikeYPd 32
                 +kl +  +k+ ++++A++  ++li  +P 
  KHJ33320.1  7 ILKLIEVSIKTERYEDAVADCRDLIAAHPR 36
                5666666677569*************9996 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 1.5
                HHHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6  3 lyklalsyrklgdtdkAlealerlik 28
                l  l+ ++ kl+++++A e+++  i+
  KHJ33320.1 41 LVFLGFALSKLDKYQDAEETYRLAIQ 66
                666899999999*********98776 PP

  == domain 3  score: 13.2 bits;  conditional E-value: 0.00014
                 HHHHHHHHHHHH.HHHHHHHHHHHHHHHH-TT- CS
       TPR_6   2 Alyklalsyrkl.gdtdkAlealerlikeYPdS 33 
                 Al+  al y++  +++ +A+ ++e+l+++ P S
  KHJ33320.1 425 ALLGTALVYYQSpKNHPEAKSIFENLLERDPSS 457
                 9*********8657*****************98 PP

  == domain 4  score: 11.4 bits;  conditional E-value: 0.00051
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAlealerlike 29 
                 Al  ++l y++  d+d+A+e ++r +k+
  KHJ33320.1 460 ALIGIGLIYEEEEDYDAAIEFFDRALKK 487
                 78899******66************997 PP

  == domain 5  score: 1.1 bits;  conditional E-value: 0.97
                 HHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkA 19 
                 +y+ ++++ +  dt+kA
  KHJ33320.1 537 QYRYGMCLWNI-DTTKA 552
                 7**********.99999 PP

  == domain 6  score: -0.8 bits;  conditional E-value: 3.9
                 H.......HHHHHHHHHHHH CS
       TPR_6  13 l.......gdtdkAlealer 25 
                 +       +d+ +A++ +++
  KHJ33320.1 582 GifyadycKDKKRARKCFQK 601
                 0444455679999***9998 PP

  == domain 7  score: -1.7 bits;  conditional E-value: 7.8
                 HHHH.HHHHHHHHHHHHHHHHH-TT CS
       TPR_6   9 syrk.lgdtdkAlealerlikeYPd 32 
                 + ++   d+ k+++ ++  ++  Pd
  KHJ33320.1 663 AELNkH-DYGKSIASFQAALRISPD 686
                 555545.88899*******999998 PP

  == domain 8  score: 4.0 bits;  conditional E-value: 0.12
                 HHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   4 yklalsyrklgdtdkAlealerl 26 
                 y+la   r+l ++d+A++ ++ +
  KHJ33320.1 733 YMLANVNRELANYDEAIAGYQGV 755
                 99*******77*******99965 PP

  == domain 9  score: -0.9 bits;  conditional E-value: 4.5
                 HHHHHHHHHHHH CS
       TPR_6   2 Alyklalsyrkl 13 
                 A+y+l++  +k+
  KHJ33320.1 910 AFYNLGWIEYKA 921
                 89******9996 PP

  == domain 10  score: 1.5 bits;  conditional E-value: 0.75
                  HHHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6    5 klalsyrklgdtdkAlealerlikeYPd 32  
                  +l+ +y+ + d+  A ea+ r  ++ Pd
  KHJ33320.1  993 NLGTLYLLQSDYLLANEAFTRAQSSDPD 1020
                  5899****99***********9999987 PP

  == domain 11  score: 4.9 bits;  conditional E-value: 0.061
                  HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6    2 AlyklalsyrklgdtdkAleal 23  
                  A++  +l++++lg+ d Al+++
  KHJ33320.1 1199 AYLAVGLAHYNLGQIDSALQYF 1220
                  88899******99*******98 PP

  == domain 12  score: 1.9 bits;  conditional E-value: 0.55
                  HHHH...HHHHHHHHHHHHHHHH-TT- CS
       TPR_6   10 yrkl...gdtdkAlealerlikeYPdS 33  
                  + ++   g  + A+ +l ++i+++Pd+
  KHJ33320.1 1241 LWAQgdkGSRESARSYLFDCIESHPDH 1267
                  333356577789*************96 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.2    0.0078         6       6      65 ..      15      74 ..      10      76 .. 0.94
   2 !   10.5   0.0   0.00066      0.51       5      60 ..     434     489 ..     431     534 .. 0.77
   3 ?    4.7   0.0     0.042        33       6      59 ..     665     718 ..     660     724 .. 0.87
   4 ?    4.0   0.1     0.071        55      20      61 ..     979    1020 ..     977    1025 .. 0.93
   5 ?   -1.7   0.0       4.2   3.3e+03      25      53 ..    1098    1126 ..    1092    1129 .. 0.83
   6 ?    3.8   0.1     0.084        65      31      63 ..    1199    1231 ..    1196    1240 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0078
       TPR_9  6 ireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapda 65
                i  e++e a a +  l++ +P+    +   G++l +l+ ++ A +    ++++ p+ p+a
  KHJ33320.1 15 IKTERYEDAVADCRDLIAAHPRNYLALVFLGFALSKLDKYQDAEETYRLAIQVKPNEPQA 74
                7889***************************************************99987 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00066
       TPR_9   5 aireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalap 60 
                 +++++++++a  + e ll  +P +   +   Gl++++ +++ aA++ ++++l ++ 
  KHJ33320.1 434 YQSPKNHPEAKSIFENLLERDPSSTPALIGIGLIYEEEEDYDAAIEFFDRALKKEA 489
                 57777788888888888888888888888888888888888888888888876553 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.042
       TPR_9   6 ireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylala 59 
                 ++++d+ + +a  +  l + Pdd + +   G  ++  G+  aA ++L ++  l+
  KHJ33320.1 665 LNKHDYGKSIASFQAALRISPDDYHSWVGLGESYHNCGRNMAATKALLHAQKLE 718
                 67889999999999******************************9998887665 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.071
       TPR_9   20 rllllaPddpeerrdRGlllaqlGclsaAladLeaylalapd 61  
                  r l+l+ ++++ +   G l+  + ++  A +++ ++ + +pd
  KHJ33320.1  979 RSLYLNERSAQTWSNLGTLYLLQSDYLLANEAFTRAQSSDPD 1020
                  789**********************************99998 PP

  == domain 5  score: -1.7 bits;  conditional E-value: 4.2
       TPR_9   25 aPddpeerrdRGlllaqlGclsaAladLe 53  
                  +P+d + r    l l+q++++  Al+dL 
  KHJ33320.1 1098 NPRDLSSRHLTTLFLEQVNDIPSALKDLS 1126
                  6777777777788999***********96 PP

  == domain 6  score: 3.8 bits;  conditional E-value: 0.084
       TPR_9   31 errdRGlllaqlGclsaAladLeaylalapdap 63  
                   ++  Gl+++ lG++  Al+ +  +l+ + ++ 
  KHJ33320.1 1199 AYLAVGLAHYNLGQIDSALQYFLPALEESNNNS 1231
                  56789*************999877777666554 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0     0.009         7       1      33 [.      40      70 ..      40      73 .. 0.83
   2 ?   -1.6   0.0       4.6   3.6e+03       6      22 ..     382     398 ..     379     409 .. 0.84
   3 !   15.5   0.1   1.7e-05     0.013       1      33 [.     460     490 ..     460     493 .. 0.86
   4 ?   -0.7   0.0       2.4   1.9e+03       2      32 ..     578     607 ..     577     611 .. 0.77
   5 ?    2.6   0.0      0.22   1.8e+02       4      16 ..     615     627 ..     612     630 .. 0.91
   6 ?   -0.8   0.0       2.7   2.1e+03      14      34 ..     669     689 ..     658     690 .. 0.80
   7 ?    2.4   0.1      0.25   1.9e+02       5      31 ..     735     761 ..     733     779 .. 0.77
   8 ?   -0.2   0.0       1.7   1.3e+03      14      29 ..     936     951 ..     932     957 .. 0.77
   9 ?    0.6   0.0      0.91   7.1e+02       1      15 [.     990    1004 ..     990    1020 .. 0.78
  10 ?    2.3   0.0      0.27   2.1e+02      13      30 ..    1037    1054 ..    1035    1060 .. 0.85
  11 ?    0.6   0.1      0.93   7.2e+02       5      20 ..    1155    1170 ..    1153    1185 .. 0.84
  12 ?    2.3   0.1      0.28   2.1e+02       1      30 [.    1199    1226 ..    1199    1232 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.009
       TPR_7  1 aLlnLarlysrlGdyeeAielyeqsLaltkdpe 33
                aL+ L+ + s+l +y++A+e y+   a+   p+
  KHJ33320.1 40 ALVFLGFALSKLDKYQDAEETYRL--AIQVKPN 70
                688899999**************9..7766665 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 4.6
       TPR_7   6 arlysrlGdyeeAiely 22 
                 ++ y++l +ye  ++l 
  KHJ33320.1 382 GEFYQNLEEYESVVDLM 398
                 789********988875 PP

  == domain 3  score: 15.5 bits;  conditional E-value: 1.7e-05
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkdpe 33 
                 aL  ++ +y+++ dy+ Aie++ +  al k+ +
  KHJ33320.1 460 ALIGIGLIYEEEEDYDAAIEFFDR--ALKKEAG 490
                 577799******************..8887766 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 2.4
       TPR_7   2 LlnLarlysr.lGdyeeAielyeqsLaltkdp 32 
                 +  L+  y + + d ++A +++++  a++ + 
  KHJ33320.1 578 YTILGIFYADyCKDKKRARKCFQK--AFELSS 607
                 5567788888888999********..887665 PP

  == domain 5  score: 2.6 bits;  conditional E-value: 0.22
       TPR_7   4 nLarlysrlGdye 16 
                 +Lar++ ++G++e
  KHJ33320.1 615 RLARIFAEQGEWE 627
                 79**********8 PP

  == domain 6  score: -0.8 bits;  conditional E-value: 2.7
       TPR_7  14 dyeeAielyeqsLaltkdped 34 
                 dy + i  ++++L++  d+++
  KHJ33320.1 669 DYGKSIASFQAALRISPDDYH 689
                 89999******8888888775 PP

  == domain 7  score: 2.4 bits;  conditional E-value: 0.25
       TPR_7   5 LarlysrlGdyeeAielyeqsLaltkd 31 
                 La++ ++l +y+eAi  y+ +L  +k 
  KHJ33320.1 735 LANVNRELANYDEAIAGYQGVLCQRKG 761
                 677778899999999888875554444 PP

  == domain 8  score: -0.2 bits;  conditional E-value: 1.7
       TPR_7  14 dyeeAielyeqsLalt 29 
                 + + Ai+++++s++++
  KHJ33320.1 936 YLKVAIRCFKRSIEIE 951
                 5667*******99876 PP

  == domain 9  score: 0.6 bits;  conditional E-value: 0.91
       TPR_7    1 aLlnLarlysrlGdy 15  
                  +++nL+ ly  + dy
  KHJ33320.1  990 TWSNLGTLYLLQSDY 1004
                  689**********99 PP

  == domain 10  score: 2.3 bits;  conditional E-value: 0.27
       TPR_7   13 GdyeeAielyeqsLaltk 30  
                  Gd++eA +ly+ +L++  
  KHJ33320.1 1037 GDMKEAHTLYTHALEISV 1054
                  9***********888765 PP

  == domain 11  score: 0.6 bits;  conditional E-value: 0.93
       TPR_7    5 LarlysrlGdyeeAie 20  
                  +ar++ +lG y+eAie
  KHJ33320.1 1155 IARCQLSLGFYDEAIE 1170
                  79999**********8 PP

  == domain 12  score: 2.3 bits;  conditional E-value: 0.28
       TPR_7    1 aLlnLarlysrlGdyeeAielyeqsLaltk 30  
                  a+l+ + ++ +lG+ + A++++    al++
  KHJ33320.1 1199 AYLAVGLAHYNLGQIDSALQYFLP--ALEE 1226
                  78999****************987..5555 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.1    0.0039         3      22      78 ..       3      60 ..       1      63 [. 0.89
   2 ?   -0.6   0.1         2   1.5e+03      27      46 ..     121     140 ..      90     144 .. 0.54
   3 ?    2.0   0.0      0.31   2.4e+02      29      80 ..     429     482 ..     409     484 .. 0.64
   4 ?    5.4   0.0     0.027        21       4      65 ..     439     503 ..     436     514 .. 0.81
   5 ?    6.2   0.5     0.015        12       2      69 ..     471     540 ..     470     542 .. 0.83
   6 ?   -2.0   0.2       5.7   4.4e+03      38      65 ..     591     619 ..     551     629 .. 0.64
   7 ?    2.4   0.1      0.25   1.9e+02      48      78 ..     720     751 ..     695     755 .. 0.77
   8 ?   -1.1   0.0       2.8   2.2e+03      30      49 ..     995    1014 ..     980    1057 .. 0.67
   9 ?    3.0   0.0      0.15   1.2e+02      63      77 ..    1156    1170 ..    1154    1173 .. 0.92
  10 !   15.9   1.1   1.5e-05     0.012       5      70 ..    1165    1245 ..    1164    1260 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0039
                -HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHH CS
      ANAPC3 22 spedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaa 78
                sp++++ l ++  ++++y+ A   +r++    +++  +++ ++ +l kL+ky++A+ +
  KHJ33320.1  3 SPKAILKLIEVSIKTERYEDAVADCRDLiAAHPRNYLALVFLGFALSKLDKYQDAEET 60
                6777778888899999************99999999*******************986 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 2
                 HHHHHHHHHTT-HHHHHHHH CS
      ANAPC3  27 yllAlclylngqykrAyell 46 
                  l+A++  ++ qyk+A+ell
  KHJ33320.1 121 ILFAKTNGSRTQYKKALELL 140
                 23355555666677777666 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.31
                 HHHHHHHTT-.HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3  29 lAlclylngq.ykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                  Al++y++ + + +A  +++++ + +++s  +++ ++  + + + y+ Ai  ++
  KHJ33320.1 429 TALVYYQSPKnHPEAKSIFENLlERDPSSTPALIGIGLIYEEEEDYDAAIEFFD 482
                 477777765546677777777777777777777777777777777777766655 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.027
                 -HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-H..HHHHHHHHH CS
      ANAPC3   4 nyknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnsksl..gcrylfAqc 65 
                 n+ +A  ++e ll++++ s  ++   +l + + ++y+ A+e++++a k++  ++  ++ y +A++
  KHJ33320.1 439 NHPEAKSIFENLLERDPSSTPALIGIGLIYEEEEDYDAAIEFFDRAlKKEAGNIrvRAEYAWAKA 503
                 67777788899998888888888888999999999999999999999988888855555555555 PP

  == domain 5  score: 6.2 bits;  conditional E-value: 0.015
                 TT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT..SHHHC-HHHHHHHHHHHHHT CS
      ANAPC3   2 qnnyknAiflaerllaaetespedayllAlclylngqykrAyellrka..klnskslgcrylfAqcllkL 69 
                  ++y+ Ai +++r+l++e+ +   +  +A +  lng++    + l k+  + ++k+l++r l+Aq+++ +
  KHJ33320.1 471 EEDYDAAIEFFDRALKKEAGNIRVRAEYAWAKALNGDFAMGKQELYKCltEMDGKNLQYRDLLAQTQYRY 540
                 578**********************************87664444444344499999********99876 PP

  == domain 6  score: -2.0 bits;  conditional E-value: 5.7
                 -HHHHHHHHHCT.SHHHC-HHHHHHHHHH CS
      ANAPC3  38 qykrAyellrka.klnskslgcrylfAqc 65 
                 + krA + ++ka +l s+ + ++  +A+ 
  KHJ33320.1 591 DKKRARKCFQKAfELSSSEISAAERLARI 619
                 44566666666655555555555555555 PP

  == domain 7  score: 2.4 bits;  conditional E-value: 0.25
                 CT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHH CS
      ANAPC3  48 ka.klnskslgcrylfAqcllkLkkyeeAiaa 78 
                 ++ ++ +++  + y +A +  +L +y+eAia 
  KHJ33320.1 720 ETkQKFGETWLSKYMLANVNRELANYDEAIAG 751
                 444445555578999**************985 PP

  == domain 8  score: -1.1 bits;  conditional E-value: 2.8
                  HHHHHHTT-HHHHHHHHHCT CS
      ANAPC3   30 AlclylngqykrAyellrka 49  
                  +  ++l+++y  A e + +a
  KHJ33320.1  995 GTLYLLQSDYLLANEAFTRA 1014
                  55666666666666655555 PP

  == domain 9  score: 3.0 bits;  conditional E-value: 0.15
                  HHHHHHTT-HHHHHH CS
      ANAPC3   63 AqcllkLkkyeeAia 77  
                  A+c+l L+ y+eAi 
  KHJ33320.1 1156 ARCQLSLGFYDEAIE 1170
                  9************96 PP

  == domain 10  score: 15.9 bits;  conditional E-value: 1.5e-05
                  HHHHHHHHHHHH..............HHH--HHHHHHH.HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT CS
      ANAPC3    5 yknAiflaerll.............aaetespedayll.AlclylngqykrAyellrka.klnskslgcrylfAqcllkLk 70  
                  y++Ai  +e +l             ++ ++   +ayl  +l++y++gq ++A++++ +a ++ +++ ++  l+Aq+l +++
  KHJ33320.1 1165 YDEAIENGEIALqlsaedagnkiseESRQKCRLSAYLAvGLAHYNLGQIDSALQYFLPAlEESNNNSRAVCLLAQVLWAQG 1245
                  566666666666666655555544434444444566644************************************998774 PP

>> TPR_22  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   5.8e-06    0.0045       2      91 .]     143     229 ..     142     229 .. 0.90

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 5.8e-06
      TPR_22   2 GtelaeklgrhlitpqealkkLlkilskkeqeevsklvsrerlklsandpdyqikinslaWevykdsevdelynqLvnivddDeeRrkle 91 
                  +++ + l  +l  p ++ +++ + ++  e+e++  l+ + r +l a   + +i +     ev+++s+++ ly+q++n  d++  Rr++e
  KHJ33320.1 143 TSPIFDFLQGRLPPPAQTYQQIAQNIEFDEKERINSLIGERRTRLGARIGQVTIEVK---REVMSTSDLEFLYTQIINWSDEEGVRRQYE 229
                 56777778888889999999***************************9999888765...69************************9987 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1      0.12        91     149     195 ..      41      87 ..       7     106 .. 0.79
   2 ?   -3.9   0.0       7.8     6e+03      13      32 ..     122     141 ..     114     144 .. 0.77
   3 !   11.3   0.1   0.00019      0.15     107     189 ..     421     501 ..     369     515 .. 0.76
   4 ?   -1.5   0.1       1.5   1.2e+03     150     193 ..     733     776 ..     696     780 .. 0.74
   5 ?    4.3   0.1     0.025        19     218     275 ..    1201    1258 ..    1107    1263 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.12
      TPR_15 149 llaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgr 195
                 l+ ++ + ++ ++ ++A + yr A++++p++ ++ ++l+ l+   g+
  KHJ33320.1  41 LVFLGFALSKLDKYQDAEETYRLAIQVKPNEPQAWQGLIKLYEAQGN 87 
                 555666677889999*******************9999976655555 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 7.8
      TPR_15  13 klatllykqgdvkkAlevLk 32 
                  +a++   ++++kkAle L 
  KHJ33320.1 122 LFAKTNGSRTQYKKALELLL 141
                 56777778999999999985 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 0.00019
      TPR_15 107 frsprlLssalellerakdydriaellksleeeeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdsselraallWl 189
                  +   lL  al +++  k+ ++ ++++++l e++   +s   l+  + +y++e + daA++ + +Al++++++  +ra++ W+
  KHJ33320.1 421 EHIAALLGTALVYYQSPKNHPEAKSIFENLLERD--PSSTPALIGIGLIYEEEEDYDAAIEFFDRALKKEAGNIRVRAEYAWA 501
                 3555678899999999999999999999966544..4788899999************************************6 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 1.5
      TPR_15 150 laraelyrqegqtdaAlrdyreAlalapdsselraallWlliDl 193
                 +++a+++r+ ++ d+A+  y+ +l    ++  +  al+ +l+++
  KHJ33320.1 733 YMLANVNRELANYDEAIAGYQGVLCQRKGEYGVSIALIQALVES 776
                 57899999999999999999999999999999988888888876 PP

  == domain 5  score: 4.3 bits;  conditional E-value: 0.025
      TPR_15  218 gplaaAlllLgrpkkALeylrkqakenrkdplwllaYADaleqagradeAwrlRrqvw 275 
                  ++ + A   Lg+ + AL+y+   ++e +++       A +l ++g+  + ++ R +++
  KHJ33320.1 1201 LAVGLAHYNLGQIDSALQYFLPALEESNNNSRAVCLLAQVLWAQGDKGSRESARSYLF 1258
                  3445566667777777777777777777776666777777777766666666665555 PP

>> ChAPs  ChAPs (Chs5p-Arf1p-binding proteins)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.1    0.0077         6     200     283 ..       4      87 ..       1     117 [. 0.75
   2 ?    0.2   0.0      0.37   2.9e+02     171     230 ..     426     488 ..     400     511 .. 0.78
   3 ?    2.4   0.0     0.078        61     241     285 ..     586     627 ..     567     633 .. 0.85
   4 ?    1.7   0.0      0.13     1e+02     253     287 ..     673     707 ..     659     717 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0077
                 GGGHHHHHHHHHHTT-HHHHHHHHHHHH-SSS-HHHHHHHHHHHHHHS.S--HHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT- CS
       ChAPs 200 pevvillarvllladeEvdavkllneeleeeekdaelLllqaefllsk.kkeelAlevakravksaPsefktWalLvkvYikled 283
                 p+++  l++v + +++  dav    + ++ +++++  L+    f lsk +k++ A e+ + a+++ P+e + W  L k Y ++++
  KHJ33320.1   4 PKAILKLIEVSIKTERYEDAVADCRDLIAAHPRNYLALVFL-GFALSKlDKYQDAEETYRLAIQVKPNEPQAWQGLIKLYEAQGN 87 
                 66666677788888888888888888888888887666554.565555267799**************************87653 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.37
                 HHHHHHHHHHHHT-HHHHHHHHHHHHTT-GGGHHHHHHHHHHTT-HHH...HHHHHHHHH-SS CS
       ChAPs 171 LvetllklvrltkrydralellekLkeeepevvillarvllladeEvd...avkllneeleee 230
                 L  t l + +  k++ +a +++e+L e++p  +  l+ + l+ +eE d   a++   ++l++e
  KHJ33320.1 426 LLGTALVYYQSPKNHPEAKSIFENLLERDPSSTPALIGIGLIYEEEEDydaAIEFFDRALKKE 488
                 4445566788999******************99999999999888854334677777777655 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.078
                 HHHHHHSS--HHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HH CS
       ChAPs 241 aefllskkkeelAlevakravksaPsefktWalLvkvYikledie 285
                 a+++ +kk+   A ++ ++a +++ se +   +L++++ +++++e
  KHJ33320.1 586 ADYCKDKKR---ARKCFQKAFELSSSEISAAERLARIFAEQGEWE 627
                 666666655...89*****************************98 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.13
                 HHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHH CS
       ChAPs 253 AlevakravksaPsefktWalLvkvYikledienA 287
                  ++  + a +++P +++ W+ L ++Y + +    A
  KHJ33320.1 673 SIASFQAALRISPDDYHSWVGLGESYHNCGRNMAA 707
                 444457899*****************988765544 PP

>> Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.33   2.6e+02      12      35 ..      15      38 ..      14      42 .. 0.91
   2 !    6.7   0.1    0.0098       7.7       6      37 ..      43      74 ..      38      85 .. 0.91
   3 ?    0.2   0.0       1.1   8.3e+02      15      33 ..     438     456 ..     433     461 .. 0.90
   4 ?    3.4   0.0      0.11        82      16      34 ..     473     491 ..     471     496 .. 0.90
   5 ?    2.1   0.0      0.27   2.1e+02       7      34 ..     660     687 ..     659     689 .. 0.94
   6 ?    4.2   0.2     0.059        46       8      38 ..    1204    1234 ..    1200    1240 .. 0.81
   7 ?   -2.8   0.0       9.1   7.1e+03      19      33 ..    1252    1266 ..    1251    1273 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.33
                HHHT-HHHHHHHHHHHHHHTTS-H CS
  Fis1_TPR_C 12 yklgeYseArryvdalLeiEPenr 35
                +k  +Y++A   ++ l++ +P+n 
  KHJ33320.1 15 IKTERYEDAVADCRDLIAAHPRNY 38
                6899******************95 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0098
                HHHHHHHHHT-HHHHHHHHHHHHHHTTS-HHH CS
  Fis1_TPR_C  6 ylAlGhyklgeYseArryvdalLeiEPenrQa 37
                +l ++  kl +Y++A +  +  +++ P+  Qa
  KHJ33320.1 43 FLGFALSKLDKYQDAEETYRLAIQVKPNEPQA 74
                78999************************999 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 1.1
                 T-HHHHHHHHHHHHHHTTS CS
  Fis1_TPR_C  15 geYseArryvdalLeiEPe 33 
                 +++ eA+   + lLe +P+
  KHJ33320.1 438 KNHPEAKSIFENLLERDPS 456
                 7899*************97 PP

  == domain 4  score: 3.4 bits;  conditional E-value: 0.11
                 -HHHHHHHHHHHHHHTTS- CS
  Fis1_TPR_C  16 eYseArryvdalLeiEPen 34 
                 +Y+ A ++ d+ L++E +n
  KHJ33320.1 473 DYDAAIEFFDRALKKEAGN 491
                 8***************999 PP

  == domain 5  score: 2.1 bits;  conditional E-value: 0.27
                 HHHHHHHHT-HHHHHHHHHHHHHHTTS- CS
  Fis1_TPR_C   7 lAlGhyklgeYseArryvdalLeiEPen 34 
                 lA++ +  ++Y ++    +a L+i P+ 
  KHJ33320.1 660 LAVAELNKHDYGKSIASFQAALRISPDD 687
                 89************************85 PP

  == domain 6  score: 4.2 bits;  conditional E-value: 0.059
                  HHHHHHHT-HHHHHHHHHHHHHHTTS-HHHH CS
  Fis1_TPR_C    8 AlGhyklgeYseArryvdalLeiEPenrQaq 38  
                   l+hy lg+ + A++y    Le   +n+ a 
  KHJ33320.1 1204 GLAHYNLGQIDSALQYFLPALEESNNNSRAV 1234
                  468*************999999988887765 PP

  == domain 7  score: -2.8 bits;  conditional E-value: 9.1
                  HHHHHHHHHHHHTTS CS
  Fis1_TPR_C   19 eArryvdalLeiEPe 33  
                   Ar y+  ++e +P+
  KHJ33320.1 1252 SARSYLFDCIESHPD 1266
                  69***********98 PP

>> TPR_20  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.78   6.1e+02       7      74 ..      23      88 ..      18      93 .. 0.81
   2 ?   -1.0   0.0       2.8   2.2e+03       8      47 ..     478     517 ..     442     529 .. 0.67
   3 ?    0.4   0.0       1.1   8.3e+02      35      71 ..     554     606 ..     549     619 .. 0.79
   4 !   10.0   0.0    0.0011      0.86       6      55 ..     672     721 ..     668     734 .. 0.90
   5 ?    0.8   0.0      0.83   6.5e+02      14      50 ..    1223    1262 ..    1197    1269 .. 0.60

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.78
      TPR_20  7 elaeleaalaanpddldarldlAlallaagryeeAleqLleilkrdrkweddaarkqllkifealgsq 74
                 +a+ ++ +aa+p ++ a + l  al +  +y++A e     ++   k ++ +a + l+k+ ea g++
  KHJ33320.1 23 AVADCRDLIAAHPRNYLALVFLGFALSKLDKYQDAEETYRLAIQ--VKPNEPQAWQGLIKLYEAQGND 88
                5788899999*********99*9999999999999887655555..4555688888899988888875 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.8
      TPR_20   8 laeleaalaanpddldarldlAlallaagryeeAleqLle 47 
                 ++ +++al+++  ++  r ++A a + +g+ +   ++L++
  KHJ33320.1 478 IEFFDRALKKEAGNIRVRAEYAWAKALNGDFAMGKQELYK 517
                 4445566666777777676666666666666666666655 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 1.1
      TPR_20  35 agryeeAleqLleilkrdrkw................eddaarkqllkifeal 71 
                 +++++ A + +l+ lk+++++                ++++ark + k fe+ 
  KHJ33320.1 554 RKDRKGAYAYFLAALKTNLNFapaytilgifyadyckDKKRARKCFQKAFELS 606
                 56777788888888888888888888888888888879999999999999975 PP

  == domain 4  score: 10.0 bits;  conditional E-value: 0.0011
      TPR_20   6 pelaeleaalaanpddldarldlAlallaagryeeAleqLleilkrdrkw 55 
                 +++a+++aal  +pdd+   + l + ++  gr+ +A ++Ll+  k +r+ 
  KHJ33320.1 672 KSIASFQAALRISPDDYHSWVGLGESYHNCGRNMAATKALLHAQKLERET 721
                 57999************************************987766665 PP

  == domain 5  score: 0.8 bits;  conditional E-value: 0.83
      TPR_20   14 alaanpddldarldlAlallaagr...yeeAleqLleilk 50  
                  al+++ ++  a + lA++l a+g+   +e A + L++ ++
  KHJ33320.1 1223 ALEESNNNSRAVCLLAQVLWAQGDkgsRESARSYLFDCIE 1262
                  5566666666666666666666541114555555555554 PP

>> BTAD  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00024      0.19      66     124 ..       8      66 ..       4      71 .. 0.92
   2 ?    0.7   0.1       0.8   6.3e+02      66     118 ..     658     710 ..     656     720 .. 0.87
   3 ?   -2.4   0.1       7.7     6e+03      26      84 ..     742     799 ..     737     804 .. 0.66
   4 ?    4.2   0.1      0.07        54      57     112 ..    1192    1247 ..    1154    1253 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00024
                 HHHHHHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
        BTAD  66 ealaeaelrlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYerlrr 124
                  +l+e  ++ +r+e+a+a+ ++l+a+hP +  +   l  Al ++++ ++A e+Y+ + +
  KHJ33320.1   8 LKLIEVSIKTERYEDAVADCRDLIAAHPRNYLALVFLGFALSKLDKYQDAEETYRLAIQ 66 
                 57899999**********************************************98765 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.8
                 HHHHHHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHH CS
        BTAD  66 ealaeaelrlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeALev 118
                 +ala ael   ++ + +a  +a+++  P +  ++  l + ++ +Gr+ +A ++
  KHJ33320.1 658 AALAVAELNKHDYGKSIASFQAALRISPDDYHSWVGLGESYHNCGRNMAATKA 710
                 67788889999999*********************************999776 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 7.7
                 HHHHHHHHTT--SSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHH CS
        BTAD  26 aelleaAlalwrGpaladleagewleaererleelrlealealaeaelrlGraeealae 84 
                 ++ +++A+a ++G + +   ++    a +++l e++l+ +e+ +    +++ra ea++e
  KHJ33320.1 742 LANYDEAIAGYQGVLCQRKGEYGVSIALIQALVESALDGVEKGLF-GYAIERAVEAIEE 799
                 566777888888887777777777777777777777777776654.4555555555554 PP

  == domain 4  score: 4.2 bits;  conditional E-value: 0.07
                  HHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-H CS
        BTAD   57 leelrlealealaeaelrlGraeealaelealvaehPlrErlhrqlmrAlarsGrq 112 
                   ++ rl+a+ a   a+  lG+++ al++   +++e + + r++++l + l ++G++
  KHJ33320.1 1192 RQKCRLSAYLAVGLAHYNLGQIDSALQYFLPALEESNNNSRAVCLLAQVLWAQGDK 1247
                  46779*****************************************9999999986 PP

>> TPR_3  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.2      0.01       8.1      15      29 ..      52      64 ..      44      66 .. 0.88
   2 ?    2.8   0.2      0.16   1.2e+02      15      25 ..     472     482 ..     470     487 .. 0.89
   3 ?   -2.5   0.0       6.9   5.3e+03      16      30 ..     744     757 ..     744     758 .. 0.84
   4 ?    5.0   0.1     0.032        25       7      24 ..    1203    1220 ..    1196    1228 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.01
                T-HHHHHHH..HHHH CS
       TPR_3 15 kkyqeArelfsYall 29
                +kyq+A+e+  Y+l+
  KHJ33320.1 52 DKYQDAEET--YRLA 64
                8********..9998 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.16
                 T-HHHHHHH.. CS
       TPR_3  15 kkyqeArelfs 25 
                 ++y+ A+e+f+
  KHJ33320.1 472 EDYDAAIEFFD 482
                 79*******98 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 6.9
                 -HHHHHHH..HHHHH CS
       TPR_3  16 kyqeArelfsYalla 30 
                 +y+eA+  ++ ++l+
  KHJ33320.1 744 NYDEAIAGYQ-GVLC 757
                 7*****9998.7776 PP

  == domain 4  score: 5.0 bits;  conditional E-value: 0.032
                  HHHHHHHTT-HHHHHHH. CS
       TPR_3    7 yAaefynkkkyqeArelf 24  
                  ++ + yn ++++ A+++f
  KHJ33320.1 1203 VGLAHYNLGQIDSALQYF 1220
                  48999************4 PP

>> SHNi-TPR  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0     0.001      0.79       6      24 ..       9      27 ..       5      29 .. 0.88
   2 ?   -1.4   0.0       2.1   1.7e+03      24      33 ..     133     142 ..     131     145 .. 0.81
   3 ?   -3.0   0.3       6.5   5.1e+03      14      28 ..     471     485 ..     470     486 .. 0.69
   4 ?   -1.8   0.0       2.9   2.2e+03       7      24 ..     735     752 ..     734     753 .. 0.82
   5 ?   -2.2   0.0       3.7   2.9e+03      15      30 ..    1163    1178 ..    1160    1178 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.001
    SHNi-TPR  6 lLGEislEnenFpqAveDl 24
                +L E+s+ +e++++Av D 
  KHJ33320.1  9 KLIEVSIKTERYEDAVADC 27
                677**************95 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.1
    SHNi-TPR  24 lrkaLeLreq 33 
                 ++kaLeL + 
  KHJ33320.1 133 YKKALELLLP 142
                 9******876 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 6.5
    SHNi-TPR  14 nenFpqAveDlrkaL 28 
                  e ++ A+e +++aL
  KHJ33320.1 471 EEDYDAAIEFFDRAL 485
                 566788888777777 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 2.9
    SHNi-TPR   7 LGEislEnenFpqAveDl 24 
                 L++++ E  n+++A+  +
  KHJ33320.1 735 LANVNRELANYDEAIAGY 752
                 788888889*****9866 PP

  == domain 5  score: -2.2 bits;  conditional E-value: 3.7
    SHNi-TPR   15 enFpqAveDlrkaLeL 30  
                  +++++A+e+ + aL+L
  KHJ33320.1 1163 GFYDEAIENGEIALQL 1178
                  68******98888876 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1       3.4   2.7e+03      19      32 ..      53      66 ..      49      67 .. 0.85
   2 ?   -0.4   0.0       1.6   1.2e+03      26      36 ..     132     142 ..     127     144 .. 0.86
   3 ?    2.5   0.0       0.2   1.6e+02      14      32 ..     468     486 ..     461     495 .. 0.80
   4 ?   -0.1   0.0       1.3     1e+03       9      32 ..     659     682 ..     656     683 .. 0.89
   5 ?   -2.6   0.3       7.8   6.1e+03      19      28 ..     744     753 ..     741     753 .. 0.86
   6 ?    3.5   0.0     0.096        75      18      33 ..    1037    1052 ..    1036    1072 .. 0.86
   7 ?   -2.0   0.0         5   3.9e+03      25      51 ..    1163    1193 ..    1159    1196 .. 0.59
   8 ?    3.8   0.0     0.075        59      29      46 ..    1215    1232 ..    1214    1240 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 3.4
         MIT 19 nyeeAlelYkeale 32
                +y++A e Y+ a++
  KHJ33320.1 53 KYQDAEETYRLAIQ 66
                89999999999997 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 1.6
         MIT  26 lYkealelLlq 36 
                  Yk+alelLl+
  KHJ33320.1 132 QYKKALELLLP 142
                 69******997 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.2
         MIT  14 eDnagnyeeAlelYkeale 32 
                 ++++++y++A+e +  al+
  KHJ33320.1 468 YEEEEDYDAAIEFFDRALK 486
                 6778888888888887774 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 1.3
         MIT   9 kkAveeDnagnyeeAlelYkeale 32 
                   Av e n+++y + +  ++ al+
  KHJ33320.1 659 ALAVAELNKHDYGKSIASFQAALR 682
                 579****************99986 PP

  == domain 5  score: -2.6 bits;  conditional E-value: 7.8
         MIT  19 nyeeAlelYk 28 
                 ny+eA+  Y+
  KHJ33320.1 744 NYDEAIAGYQ 753
                 9*****9997 PP

  == domain 6  score: 3.5 bits;  conditional E-value: 0.096
         MIT   18 gnyeeAlelYkealel 33  
                  g+ +eA  lY++ale+
  KHJ33320.1 1037 GDMKEAHTLYTHALEI 1052
                  7899**********96 PP

  == domain 7  score: -2.0 bits;  conditional E-value: 5
         MIT   25 elYkealelLlqalk.e.kne..errellre 51  
                    Y ea+e    al+   +++  +  e  r+
  KHJ33320.1 1163 GFYDEAIENGEIALQlSaEDAgnKISEESRQ 1193
                  5688888888888884332223344444444 PP

  == domain 8  score: 3.8 bits;  conditional E-value: 0.075
         MIT   29 ealelLlqalke.kneerr 46  
                  +al+++l+al e +n ++r
  KHJ33320.1 1215 SALQYFLPALEEsNN-NSR 1232
                  79*********8544.443 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.1       1.4   1.1e+03      16      31 ..      18      33 ..      16      34 .. 0.82
   2 ?    4.7   0.0     0.036        28       8      31 ..      44      67 ..      40      68 .. 0.90
   3 ?    0.0   0.1       1.1   8.6e+02       8      30 ..     464     486 ..     460     487 .. 0.85
   4 ?   -2.1   0.0       5.2     4e+03       8      31 ..     581     605 ..     577     606 .. 0.80
   5 ?    0.8   0.1      0.63   4.9e+02       8      26 ..     735     753 ..     731     757 .. 0.81
   6 ?   -0.7   0.0       1.9   1.5e+03      15      31 ..    1036    1052 ..    1031    1054 .. 0.83
   7 ?    6.3   0.1     0.011       8.9       2      30 ..    1197    1225 ..    1196    1226 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.4
      TPR_10 16 grydeAealleealai 31
                 ry++A+a++++ +a+
  KHJ33320.1 18 ERYEDAVADCRDLIAA 33
                5999999999998886 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.036
      TPR_10  8 LanalrqrgrydeAealleealai 31
                L+ al+++ +y++Ae+ ++ a+++
  KHJ33320.1 44 LGFALSKLDKYQDAEETYRLAIQV 67
                99**************99999875 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 1.1
      TPR_10   8 LanalrqrgrydeAealleeala 30 
                 ++ ++ +  +yd+A +++++al 
  KHJ33320.1 464 IGLIYEEEEDYDAAIEFFDRALK 486
                 6888888899**********995 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 5.2
      TPR_10   8 Lanal.rqrgrydeAealleealai 31 
                 L++ +    ++ ++A++ +++a ++
  KHJ33320.1 581 LGIFYaDYCKDKKRARKCFQKAFEL 605
                 77777777889999******99875 PP

  == domain 5  score: 0.8 bits;  conditional E-value: 0.63
      TPR_10   8 LanalrqrgrydeAealle 26 
                 Lan+ r++ +ydeA a ++
  KHJ33320.1 735 LANVNRELANYDEAIAGYQ 753
                 9999999999999987655 PP

  == domain 6  score: -0.7 bits;  conditional E-value: 1.9
      TPR_10   15 rgrydeAealleealai 31  
                  +g+ +eA  l+ +al+i
  KHJ33320.1 1036 TGDMKEAHTLYTHALEI 1052
                  68899**********98 PP

  == domain 7  score: 6.3 bits;  conditional E-value: 0.011
      TPR_10    2 AsslnNLanalrqrgrydeAealleeala 30  
                  +s++   + a++++g+ d A++++  al+
  KHJ33320.1 1197 LSAYLAVGLAHYNLGQIDSALQYFLPALE 1225
                  7889999****************988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1417 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 0.92u 0.27s 00:00:01.19 Elapsed: 00:00:00.49
# Mc/sec: 8721.61
//
Query:       KHJ33321.1  [L=762]
Description: putative glycoside hydrolase family 5 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.4e-21   74.9   0.0    1.2e-20   73.8   0.0    1.6  1  Glyco_hydro_5_C  Glycoside hydrolase family 5 C-terminal doma
    3.3e-13   49.7   6.3    7.4e-09   35.4   2.7    2.8  2  Cellulase        Cellulase (glycosyl hydrolase family 5)


Domain annotation for each model (and alignments):
>> Glyco_hydro_5_C  Glycoside hydrolase family 5 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.8   0.0   1.4e-24   1.2e-20       1      87 []     641     730 ..     641     730 .. 0.93

  Alignments for each domain:
  == domain 1  score: 73.8 bits;  conditional E-value: 1.4e-24
  Glyco_hydro_5_C   1 RPyPakvaGtplsfsfdlktgeftlewtadkssaedseTeIflPelhyp.kgrkvevsggkwey....deerqtlyvvwahsepgeqhtvtV 87 
                      RP+P+++ Gt+l+++f+l++++ftle  +d+++++d +TeI+lPe+h+p + +++ vs+g+w++    ++e   ++++w+  e g++ +++V
       KHJ33321.1 641 RPFPIATCGTILNYGFNLRDCTFTLETLKDTTIDSDLPTEIYLPEFHFPkNRCDIIVSSGEWTInsddSNEGISQCLKWWMPE-GRH-HIKV 730
                      9************************************************7777***********99866688899******99.855.8877 PP

>> Cellulase  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   2.7   8.2e-13   7.4e-09      27     134 ..      70     251 ..      50     263 .. 0.80
   2 !   14.1   0.1   2.6e-06     0.024     147     253 ..     378     510 ..     363     542 .. 0.68

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 8.2e-13
                 HHHHHHHT-SEEEEEEECTGGTTSSTTTGCTHHHHHHHHHHHHHHHHTT-EEEEEEESS...........TTT......CSSSSTTTTHHHHHHH.... CS
   Cellulase  27 idevkdagfntvRlpvswgelvenapdykvdenslerveevvkyakenglyvildiHse...........egw......ltkadgnssedtaeef.... 104
                 ++ +k++g+nt+R  ++w+ + +++p + +d+++++   e++  ak  g+y++ d+H++           + w      l+++++ ++e          
  KHJ33321.1  70 FSRLKSWGYNTIRYIFTWEAIESAGPRI-YDDDWIQHTIEILRIAKGYGFYIFMDPHQDvwsrfsggsgaPMWtlyacgLNPQKFVETE-----Aalvh 162
                 5689**************9999999999.*****************************9888888888886667665553333333332.....23344 PP

                 .............................................................HHHHHHHHHHHHTTTTTTEEEESSSS--ST CS
   Cellulase 105 .............................................................fkklwtqiAerykkndevvifelmNEPhgn 134
                                                                              f+k     A  +  +++v+++e mNEP+ +
  KHJ33321.1 163 ntysnpsnfpkmiwstnytrlacqtiftlffagrdfapnciidgkniqdflqdhfigalsyFAK-KIHEAGDL-EDNPVIGWESMNEPNRG 251
                 4555566667777788888889999999999999999999999999999999999999888777.55558889.9*************984 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 2.6e-06
                 HHHHHHHHHHHHHHHHTTSSEEEEECHHHHTBHHHHHCTSGSSSSTTEEEEEEEETTTHH.HTGCGS.......................HSCTHHHHH CS
   Cellulase 147 evkayaeeaikaIRavgpnrliivegnswsgnldgavlndPndsqdnliysvHfYgpsdf.aqtefg.......................kdltdktnl 221
                   ++y+ +  +aIR+++++ +++++ +  ++ +  ++ +d  d + +++y++H+Y+++   +++++                             ++ +
  KHJ33321.1 378 YFMEYYRKHRDAIREHHKKSILFCQPPVLEKPPLIKGTKD--D-DPKMVYAPHYYDGVTLmTKKWNRfwnvdvlgvlrgryshpimaiklG----ESAI 469
                 5678999999****************99988666644443..3.5699********77650444555***************999965553....4555 PP

                 HHHHHHHHHHHHHT......TSEEEEEEEESS.TTSSH..H CS
   Cellulase 222 aqrledaakylvek......gipviigEfGgs.nadgd..l 253
                 +++++d  k ++++      + p +++EfG   ++d++   
  KHJ33321.1 470 RNCFRDQLKAIRQEgldnmgNHPCVLTEFGIPyDMDNQyaY 510
                 55555555555554111132458999999987555554541 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (762 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       314  (0.0175135); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 5340.00
//
Query:       KHJ33322.1  [L=710]
Description: putative rho gtpase activator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-27   96.4   0.0      3e-27   95.3   0.0    1.5  1  RhoGAP    RhoGAP domain
  ------ inclusion threshold ------
      0.091   11.7   0.0      0.091   11.7   0.0    2.2  3  XRN_M     Xrn1 helical domain


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.3   0.0   3.3e-31     3e-27       1     143 [.     385     527 ..     385     531 .. 0.92

  Alignments for each domain:
  == domain 1  score: 95.3 bits;  conditional E-value: 3.3e-31
                 BHHHHHHHHHHHHHTTTSTTTTTS-S-HHHHHHHHHHHHHTGGGCT..TTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHHHHTSSSHHHHHHHHH CS
      RhoGAP   1 PiivekcvefiekrgldtegiyRvsgskarvkelreafdkgkavds..dleeedvhavaslLKrfLrelpepLltkelyeelieaaksedeeerlealk 97 
                 P++ ++ +++++ +g d+eg+yRv+gs  ++k+ r +fd++ + ++  +++ +d++ + s+LK +Lrelp+ Ll+k   +++    +  d e+  + l 
  KHJ33322.1 385 PAFPWRAIDYLNFKGSDVEGLYRVPGSGPEIKKWRRRFDQELDINLfeQDDLYDINIIGSMLKAWLRELPDELLPKLVQDRIA--RECADSEKVPQLLV 481
                 6667789************************************998999999************************8888888..34466777778899 PP

                 HHHTTS-HHHHHHHHHHHHHHHHHHHTHHHH---HHHHHHHHHHHH CS
      RhoGAP  98 ellekLPkenrdtLryLlehLkrvaenskenkMtaknLaivfaPtL 143
                 + l++L++ n+ +L ++  hL+ + ++s++nkM+ +nL+i+f+P++
  KHJ33322.1 482 DELSNLSPFNYYLLFAITCHLSLLLAHSDKNKMDYRNLCICFQPCM 527
                 99******************************************87 PP

>> XRN_M  Xrn1 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.5      0.17   1.5e+03      81     114 ..     262     295 ..     229     322 .. 0.47
   2 ?   -1.7   0.0      0.12     1e+03     303     327 ..     354     378 ..     343     382 .. 0.84
   3 ?   11.7   0.0     1e-05     0.091      27     154 ..     525     654 ..     520     665 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.17
       XRN_M  81 rkrkeredrkekklakeeeaskedaaneeaavae 114
                 r+r++ ++++ +++  +++++++  +n ++ +++
  KHJ33322.1 262 RDRSKDRSKEYSNRSAKDNSKSQIITNLHKEMNK 295
                 2222222222222222222222222222222222 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.12
       XRN_M 303 gvaklPfidekrLlealakleeeLt 327
                  v+ lP ++++rL    +kle++  
  KHJ33322.1 354 KVINLPLVQQTRLTRISKKLEDSRD 378
                 6999***********9999998755 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 1e-05
       XRN_M  27 PsLeiregaidlllkvYkkelk..klggyltdngevkldrveklvslvgkveekifrkrkeredrkekklakeeeaskedaaneeaavaeeklseskva 123
                 P+++i+ +++  l++ ++++ k  k++ + ++++++ +d+++ l sl g   +   +  +e+ +r +++ ++ +++ ++++ ++++++++++++++++ 
  KHJ33322.1 525 PCMKIDAVCFRFLVCNWRDCWKgcKTEPFYIEQEYMLFDQAQSLGSLFGRRPNVTLELANEEPRRSTSSSESVNSTITSEDHKKHHNNQKSQKNQKNIP 623
                 9*******************98778999**********************9888777777777888888888888888888888888888999999999 PP

       XRN_M 124 ksaeaeaeaeaeaeaeakaekekrekaekel 154
                  +++ ++++  +++++  +++++++k  +++
  KHJ33322.1 624 IHKSSQSQTIISIKTTGLDKNDECNKRVATN 654
                 8888888888888888888887777765554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (710 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1369  (0.0763567); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.26s 00:00:00.99 Elapsed: 00:00:00.43
# Mc/sec: 4976.15
//
Query:       KHJ33323.1  [L=189]
Description: putative ulp1 protease family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.2e-15   56.2   0.0    7.5e-15   55.3   0.0    1.4  1  Peptidase_C48  Ulp1 protease family, C-terminal catalytic dom


Domain annotation for each model (and alignments):
>> Peptidase_C48  Ulp1 protease family, C-terminal catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.3   0.0   4.2e-19   7.5e-15      78     184 ..      19     119 ..       6     133 .. 0.84

  Alignments for each domain:
  == domain 1  score: 55.3 bits;  conditional E-value: 4.2e-19
                    .-GGG-SEEEEEEEC.........TTEEEEEEEETCCCEEEEE-TTS-SSH.HHHHHHHHHHHHHHHHHCCCCCSTT-.GGGEEEEEEE-----SS CS
  Peptidase_C48  78 edlfdkdiiyiPined........gkHWvlliinlpdktililDSlislhtvkkenrpinnlkpyLleealkkkqkqldltpfeierltkvpqqkn 165
                    +d+ ++ ++++Pin          g+HW+ll +++ d+t  ++DSl  +++ ++   + n+l + + ++              + ++l+  pqq+n
     KHJ33323.1  19 PDFSQTTHVFLPINDArsvtlaegGSHWSLLLVSIIDGTAFHYDSLMPSNY-NEARLATNKLSILIGRNL-------------QFVNLDDSPQQEN 100
                    6899999*******9999*********************************.555555555555555553.............459999******* PP

                    CCCHHHHHHHHHHHHHCTH CS
  Peptidase_C48 166 sgDCGiyvlkfiellaega 184
                    s DCGiyv+  +++l+ ++
     KHJ33323.1 101 SNDCGIYVCIQMRYLLLKR 119
                    *************998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1537.38
//
Query:       KHJ33324.1  [L=1299]
Description: putative powdery mildew-specific protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1086  (0.0605723); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.81u 0.28s 00:00:01.09 Elapsed: 00:00:00.46
# Mc/sec: 8551.83
//
Query:       KHJ33325.1  [L=125]
Description: hypothetical protein EV44_g3363 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       295  (0.0164538); expected 358.6 (0.02)
Passed bias filter:                      273  (0.0152267); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 910.36
//
Query:       KHJ33326.1  [L=873]
Description: putative atp-dependent rna helicase dbp7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-42  144.9   0.1    3.9e-42  144.0   0.1    1.5  1  DEAD           DEAD/DEAH box helicase
    1.5e-20   73.6   0.0    5.8e-20   71.7   0.0    2.1  2  Helicase_C     Helicase conserved C-terminal domain
    1.6e-15   57.0   0.0      4e-15   55.8   0.0    1.7  1  DUF4217        Domain of unknown function (DUF4217)
    5.6e-07   29.7   0.4    1.6e-06   28.2   0.0    1.9  2  ResIII         Type III restriction enzyme, res subunit
     0.0058   15.9   0.0       0.02   14.1   0.0    1.8  2  ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.0   0.1   1.1e-45   3.9e-42       1     175 [.     274     469 ..     274     470 .. 0.91

  Alignments for each domain:
  == domain 1  score: 144.0 bits;  conditional E-value: 1.1e-45
                 -HHHHHHHHHHHTTC.EEEEEESTTSSHHHHHHHHHHHHHHHS.......TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEE.EEETTSSHHHH CS
                 xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilggg.dvlvaaeTGsGKTlaflipvlqivyet.......kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvl.liiggvaardq 90 
                 t+iQ++aipli++++ d +++aeTGsGKT+a+l+p++q+++e        ++++g  a+i++PtreL++q+++ l k++  +   v   +igg++++++
  KHJ33326.1 274 TAIQKAAIPLIIKNDdDAFIQAETGSGKTMAYLLPIVQRIIEIssqgiqlHRDSGLFAIILAPTRELCKQIATVLDKLLRCAPWIVGtTVIGGESKQSE 372
                 79**********6644*************************999****999*****************************6554444388********* PP

                 HHHHHTTCSEEEEEHHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTT..........SE.EEEEESSBSHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..........xx.xxxxxxxxxxxxxx RF
        DEAD  91 lskldngvdivvgtpgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklq..........rq.vivlSATlpkdvkk 175
                 ++++++g++i+++tpgrl+d+l st+ l+++ vr+lVlDE drl++ gf++++++i+++l+++    + +          r+  i++SAT+  +v++
  KHJ33326.1 373 KARIRKGINILIATPGRLLDHLgSTEVLKVDTVRWLVLDEGDRLMELGFEQELKQIVEKLNNKFIMNNVSralksdslpkRRvNILCSATMVMNVQR 469
                 ********************9999************************************887777664469999999984459*******988876 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0         3   1.1e+04      20      58 ..     332     376 ..     323     386 .. 0.52
   2 !   71.7   0.0   1.6e-23   5.8e-20      13     111 .]     570     675 ..     538     675 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 3
                 EEEESSHHHHHH....HHHHHHHT......TSTEEEESTTSTHHHHHHH CS
  Helicase_C  20 lifvntidrlek....vklllekk......gikvavlhgelpqnereei 58 
                 +i ++t++ +++    ++             + ++v+ ge +q+e+ +i
  KHJ33326.1 332 IILAPTRELCKQiatvLDK----LlrcapwIVGTTVIGGESKQSEKARI 376
                 6777777766555223122....11222444555555555555555544 PP

  == domain 2  score: 71.7 bits;  conditional E-value: 1.6e-23
                 TTTTSEEEEEESSHHHHHH......HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHH CS
  Helicase_C  13 eeeggkilifvntidrlek......vklllekkgikvavlhgelpqnereeileqfnkgesd.vLiatdvaerGidipkvnlVinfdlprnvtsyiqri 104
                 e+e++  l f+ t d++ k      + + ++++ + + +lhg+l+qn r ++l++f   +   v+ +tdva+rG+d+p+v++Vi +d+p+  ++  +r+
  KHJ33326.1 570 ENEEKPNLPFISTLDEMTKdtvahgIAISNKSNTVIMHRLHGSLTQNTRTATLKSFSTSTEPcVMFCTDVASRGLDLPNVDYVIEYDPPFCADDHLHRV 668
                 55555667788888866555665555566777799999*******************989999************************************ PP

                 TTSSSTT CS
  Helicase_C 105 GRtgRag 111
                 GRt+Rag
  KHJ33326.1 669 GRTARAG 675
                 *****97 PP

>> DUF4217  Domain of unknown function (DUF4217)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.8   0.0   1.1e-18     4e-15       2      59 ..     735     794 ..     734     795 .. 0.96

  Alignments for each domain:
  == domain 1  score: 55.8 bits;  conditional E-value: 1.1e-18
     DUF4217   2 qqkleslcakdrdlkelAqkAfvsyvraYsvhlake..iFrvkkLdlealAksfGLleaP 59 
                 q  +e+++  +++  e+A+++f+s +raY++h a e  iF++ +L+l++lAk+f+L++ P
  KHJ33326.1 735 QLDVERWVQDSPKYLEMARRGFQSQIRAYATHVAGErhIFNITTLHLGHLAKAFALRDKP 794
                 7789*****************************************************988 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.3       1.3   4.8e+03      78      98 ..      57      82 ..      29     122 .. 0.55
   2 !   28.2   0.0   4.6e-10   1.6e-06       8     163 ..     277     438 ..     259     439 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.3
                TGG.....GEEEESSS-B--....... CS
      ResIII 78 lseayke.igkkvsgdkkka.....ke 98
                ++++  e +++ v+g++ +a     + 
  KHJ33326.1 57 SKNY-LEgAEELVNGENSNAkkrrrSD 82
                3333.3346666666666664433322 PP

  == domain 2  score: 28.2 bits;  conditional E-value: 4.6e-10
                 HHHHHHHHT......TTSEEEEEESTTSTHHHHH.HHHHHHH-S..............-EEEEESSHHHHHHHHHHGGGGTGG....GEEE.ESSS-B- CS
      ResIII   8 QeeaienlleklkskrdkrglikmaTGtGKTlva.aklierllkkgkee.........kflflvprkslleqtleefkkflseaykeigkk.vsgdkkk 95 
                 Q+ ai  ++     k+d  ++i+++TG+GKT+ + + +++r+ +  ++           +++l+p+++l++q  + + k+l +a   +g+  + g++k+
  KHJ33326.1 277 QKAAIPLII-----KNDDDAFIQAETGSGKTMAYlLPIVQRIIEISSQGiqlhrdsglFAIILAPTRELCKQIATVLDKLLRCAPWIVGTTvIGGESKQ 370
                 333333332.....8999****************88899999887665588******999**************9998888888666444414444444 PP

                 -........-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS....TTTHHHHHT---SEEE CS
      ResIII  96 a.kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak...kswreilekfkeavll 163
                 + k++ ++ ++il++t  +l  ++      +e l+ d+   ++ DE  rl +    ++ ++i+ek+++++++
  KHJ33326.1 371 SeKARIRKGINILIATPGRLLDHL----GSTEVLKVDTVRWLVLDEGDRLMELgfeQELKQIVEKLNNKFIM 438
                 4667789*****************....99999*****************9976655999999999888775 PP

>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.57     2e+03      73     107 ..     425     459 ..     423     474 .. 0.78
   2 !   14.1   0.0   5.6e-06      0.02      80     153 ..     604     676 ..     593     690 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.57
  ERCC3_RAD25_C  73 LkeyakklkkpyiyGetseaerlkilqkfkknpkv 107
                    Lk++ +kl++++i+ ++s+a +++ l k + n  +
     KHJ33326.1 425 LKQIVEKLNNKFIMNNVSRALKSDSLPKRRVNILC 459
                    88999999*****9999999888888777766555 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 5.6e-06
  ERCC3_RAD25_C  80 lkkpyiyGetseaerlkilqkfkknpkvntiflskvgDtsiDlPeanvliqisshfgsrrqeaqrlGriLrakk 153
                    +  + ++G+ +++ r++ l++f ++++  ++f   v+   +DlP+   +i  +  f +      r+Gr  ra k
     KHJ33326.1 604 VIMHRLHGSLTQNTRTATLKSFSTSTEPCVMFCTDVASRGLDLPNVDYVIEYDPPFCAD-DHLHRVGRTARAGK 676
                    5556689*******************************************998888764.56778888887755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (873 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 5940.98
//
Query:       KHJ33327.1  [L=204]
Description: putative transcriptional factor b3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.096   12.7   6.2       0.65   10.1   2.0    2.5  2  DZR          Double zinc ribbon
        4.7    6.8  13.0        1.6    8.3   0.1    3.9  4  zf-ribbon_3  zinc-ribbon domain


Domain annotation for each model (and alignments):
>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   2.0   7.2e-05      0.65      13      43 ..       2      40 ..       1      41 [. 0.79
   2 ?    4.3   0.1    0.0046        41      28      37 ..     164     173 ..     135     196 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 7.2e-05
         DZR 13 rfCseCgtklkavaa........edrCpsCgekvdpear 43
                ++C+ C t+ ++v           + C +C ++++++++
  KHJ33327.1  2 KYCPSCMTNCPSVLFdhpseatpYEICRNCRSPLNSGWN 40
                79******976444466778888999****999998876 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.0046
         DZR  28 edrCpsCgek 37 
                 + +Cp C++ 
  KHJ33327.1 164 NSVCPYCKAL 173
                 4455555544 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   1.5    0.0055        49       2       8 ..       1       7 [.       1       7 [. 0.92
   2 ?   -1.0   0.1      0.15   1.3e+03      17      20 ..       9      12 ..       8      13 .. 0.50
   3 ?    0.7   0.1     0.042   3.8e+02      18      25 ..      27      34 ..      26      41 .. 0.73
   4 ?    8.3   0.1   0.00018       1.6      13      23 ..     161     171 ..     158     174 .. 0.76

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.0055
  zf-ribbon_3 2 tvrCPnC 8
                +++CP+C
   KHJ33327.1 1 MKYCPSC 7
                799***9 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.15
  zf-ribbon_3 17 nvCp 20
                 ++Cp
   KHJ33327.1  9 TNCP 12
                 5666 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.042
  zf-ribbon_3 18 vCpyCGtk 25
                 +C +C ++
   KHJ33327.1 27 ICRNCRSP 34
                 68888554 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.00018
  zf-ribbon_3  13 ssddnvCpyCG 23 
                   ++ +vCpyC 
   KHJ33327.1 161 GERNSVCPYCK 171
                  57788999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       879  (0.0490267); expected 358.6 (0.02)
Passed bias filter:                      577  (0.0321825); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1566.06
//
Query:       KHJ33328.1  [L=115]
Description: hypothetical protein EV44_g3375 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.62    8.9   4.0       0.67    8.8   4.0    1.0  1  VPS38     Vacuolar protein sorting 38


Domain annotation for each model (and alignments):
>> VPS38  Vacuolar protein sorting 38
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   4.0   3.7e-05      0.67     186     269 ..       2      88 ..       1     102 [. 0.68

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 3.7e-05
                 HHHHHHHHHHHHHHHHHHHHHHS--S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.....HHHHHHH--S-THHHHHHHHH CS
       VPS38 186 eYtsqveeElqeisekveelikseekkelwslkelqkaieqlkksiekkklklkrLessleee.....nskteessesqeeslnddYgn 269
                  +++q+++E++++s    ++ ++ +  + +++k   +  +  +++ e+ +++ krL++++e e     n + e s +++  + n dY++
  KHJ33328.1   2 SFWEQIQKEMEQLSDEHASQANKDNAASEGTMKD--ERAKLCEMERERFRNQHKRLQRTDEREwdvkaNREHEYSASNSGATRNADYAS 88 
                 5799**********98888888777777765554..45556667777778888888888777777765445555555555556666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1821  (0.101567); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 862.18
//
Query:       KHJ33329.1  [L=309]
Description: putative f-box domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-27   95.4   0.2    3.3e-27   94.4   0.2    1.5  1  DUF1769   Protein of unknown function (DUF1769)


Domain annotation for each model (and alignments):
>> DUF1769  Protein of unknown function (DUF1769)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.4   0.2   1.9e-31   3.3e-27       1      54 [.      89     143 ..      89     144 .. 0.98

  Alignments for each domain:
  == domain 1  score: 94.4 bits;  conditional E-value: 1.9e-31
     DUF1769   1 GddllfGndfdrpirdrlPpgfsaalkfak.fiDpglegDlyadkPylyspllss 54 
                 G dllfGndf++pirdrlPpgf++a++++k fiDpglegD+yadkPyly+pl ss
  KHJ33329.1  89 GGDLLFGNDFENPIRDRLPPGFNTAFRIVKwFIDPGLEGDIYADKPYLYGPLGSS 143
                 78***************************************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       297  (0.0165653); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.17s 00:00:00.62 Elapsed: 00:00:00.35
# Mc/sec: 2644.65
//
Query:       KHJ33330.1  [L=361]
Description: putative glycylpeptide n-tetradecanoyltransferase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-16   59.3   0.0    3.3e-15   56.4   0.0    1.9  1  Abhydrolase_1  alpha/beta hydrolase fold
    1.1e-12   47.8   0.0    6.7e-12   45.2   0.0    1.9  1  Hydrolase_4    Serine aminopeptidase, S33
    1.6e-11   45.3   0.0    2.5e-11   44.6   0.0    1.3  1  Abhydrolase_6  Alpha/beta hydrolase family
    0.00043   20.4   0.0     0.0035   17.4   0.0    2.1  2  Abhydrolase_4  TAP-like protein
     0.0011   18.5   0.0       0.87    9.0   0.0    2.3  2  Peptidase_S9   Prolyl oligopeptidase family
     0.0017   17.2   0.0     0.0024   16.8   0.0    1.1  1  DUF1100        Alpha/beta hydrolase of unknown function (DUF1
     0.0086   16.0   0.0        4.1    7.3   0.0    2.2  2  UPF0227        Uncharacterised protein family (UPF0227)
  ------ inclusion threshold ------
      0.073   12.6   0.0       0.13   11.7   0.0    1.4  1  Lipase_2       Lipase (class 2)
      0.081   13.0   0.0       0.14   12.3   0.0    1.3  1  Thioesterase   Thioesterase domain
       0.15   11.8   0.0       0.21   11.3   0.0    1.2  1  PGAP1          PGAP1-like protein


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.4   0.0   1.9e-18   3.3e-15       3     255 ..      69     338 ..      68     339 .. 0.67

  Alignments for each domain:
  == domain 1  score: 56.4 bits;  conditional E-value: 1.9e-18
                    EEEE-STTTCGGGGTTGHHHHHHHHT.TSEEEEEEETTSTTSSSTTTGB.CHHSHHHHHHHHHHHHHHCT...TSSEEEEEETHHHHHHHHHHHHH CS
  Abhydrolase_1   3 lvilhGlpgssdvwaerglapaLakd.gfdvillDlrGvgySspapacinddygtasvaddldrildalg...ddkltlvGhSmGGmialayaaey 94 
                    lv++ Gl+    +w ++ l ++ ++  ++ v+++D rG g+S++++     +y+t  +a d+  ildal+   +++++++G SmGGmi+ + a + 
     KHJ33330.1  69 LVFVMGLGSIKTSWQRQTLKYGHEQGdKYSVLIFDNRGIGKSDKPIL----RYSTSEMALDVIEILDALKwtkQRQVHIIGISMGGMIGQEIAYLI 160
                    788889999999999999999988778*******************8....59999999999999888752226789******************* PP

                    GGGEEEEEEESE....CSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHH..........HCHHHCCHHHHH. CS
  Abhydrolase_1  95 perVkalvllga....idpaaslieaqrqqaksfpdffdgyaadcarnpagplladelaaleqrhrlvdalkf..........pdkskrfpssgs. 175
                    p+r+ +l l+++     ++   ++  q ++++ +p+++++ + d  ++ + + + +e   +e+++    ++++             + r+  ++  
     KHJ33330.1 161 PQRICSLNLMATaakiENTTTFFENMQTRIRMLVPKTLENSITDSSKTLFSDEWLNEPDCTEVPSP-GTPNVEfppsgkygkfSTNYERYAAHELc 255
                    ************666333334444444455566666666555555555555555555444444422.22222246655555553333333333321 PP

                    HHCHHHHHHHHHHHHHHHHCCHHHHHHHHHCTHHHHS.....EEEEEEETTCSSSCHHHHHHHHHC.HTSEEEEEEETCSSSHHHH CS
  Abhydrolase_1 176 dnasslatgalksieqwpttdsaklllrlrelknvla.....ptlvisgtsDplvppkaledlaql.lpkkrlvvisdagHlafle 255
                     +    a+g ++++ q  +  ++++  ++ +  ++        ++v++gt D++++  ++e+l ++  p+ + ++ +++gH  +le
     KHJ33330.1 256 KRLDPEAFGRKGFLLQLIAAGWHYKSPEQLK--EIGDkvgrdRIMVLHGTADRMITVPHGEKLIEWlQPG-TAIIKEGTGHGFILE 338
                    3445555555666666666666665555555..4444555588888888888888887777776665777.888888888877666 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   0.0   3.8e-15   6.7e-12      31     235 ..      96     336 ..      92     339 .. 0.72

  Alignments for each domain:
  == domain 1  score: 45.2 bits;  conditional E-value: 3.8e-15
  Hydrolase_4  31 GfavyalDhrGhGrsegkrghvpsfddyvdDlaafvekvkeehpelplfllGhSmGGliallyllrypdkvaglilsaPalkikaklk.appllklll 127
                   ++v+++D+rG G+s+ k     s++++  D+ ++++++k ++++ ++ ++G SmGG+i ++++   p+++  l l+a+a ki++ +  +  ++  ++
   KHJ33330.1  96 KYSVLIFDNRGIGKSD-KPILRYSTSEMALDVIEILDALKWTKQR-QVHIIGISMGGMIGQEIAYLIPQRICSLNLMATAAKIENTTTfFENMQTRIR 191
                  699************6.55557799**************965555.599***********************************88755555555555 PP

  Hydrolase_4 128 kllgkllpklqv..............................snnlkadslsrdpevvaayeadplv.hgk....itvrlllelldamkrleeraaki 190
                   l+ k+l +                                 + + k  + s + e   +y+a++l+ + +     + ++ll+l+ a+ + ++  +  
   KHJ33330.1 192 MLVPKTLENSITdssktlfsdewlnepdctevpspgtpnvefPPSGKYGKFSTNYE---RYAAHELCkRLDpeafGRKGFLLQLIAAGWHYKSPEQLK 286
                  55555555555588889999999999999999999976666644444444444444...445555553333111145677888888887777776666 PP

  Hydrolase_4 191 t.......lPllllhGeaDkvvdpeasrelyerlgskdktlklypglyHell 235
                  +         +++lhG+aD+ +     ++l+e l+    t  + +g  H  +
   KHJ33330.1 287 EigdkvgrDRIMVLHGTADRMITVPHGEKLIEWLQP--GTAIIKEGTGHGFI 336
                  655554445599999999999999999998888774..66666666666655 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.6   0.0   1.4e-14   2.5e-11       1     213 [.      69     339 ..      61     344 .. 0.64

  Alignments for each domain:
  == domain 1  score: 44.6 bits;  conditional E-value: 1.4e-14
                    EEEE--GC.....GCHHHHHHHHCCT...CEEEEE--TTSTS-GGCS--HHH...CHHHHHHHCCTT...TTSEEEEEETCHHHHHHHHHHCC... CS
  Abhydrolase_6   1 vlllHGagssassWlvapLaallaag...vhvlapDlpGhGrsdpppldled...ladlaalldelaa.gggpvvlvGHSlGGalalaaapla... 86 
                    ++++ G+gs ++sW+   L ++++++   + vl++D +G G sd p l ++    ++d+ ++ld+l+    ++v+++G S+GG+++++    a   
     KHJ33330.1  69 LVFVMGLGSIKTSWQRQTL-KYGHEQgdkYSVLIFDNRGIGKSDKPILRYSTsemALDVIEILDALKWtKQRQVHIIGISMGGMIGQE---IAyli 160
                    6788899999****53344.555555777888*********9*999999988778899999999998889999***************...66666 PP

                    ...EE..EEES-..----TTTS----TTHHHHHHTT-CCCCH..CCH.....S-HSCCCCHHH.........CCCCHCHCCCGHH........... CS
  Abhydrolase_6  87 .lvvg..vlldppptalpagllaaalelllallallrllawl..sre.....plprlfladed.........adaawrarlarla........... 152
                     ++++   l+++   a+ + +   ++e ++++++ l++ ++           ++++++l+++d         +    ++ +   +           
     KHJ33330.1 161 pQRICslNLMAT---AAKIENTTTFFENMQTRIRMLVPKTLEnsI-TdssktLFSDEWLNEPDctevpspgtP----NVEF---Ppsgkygkfstn 245
                    765666788888...888888888888888888877775555331.123334444566666666533222110....1111...112222333333 PP

                    .........................HHCC.HHCHTTCCHHTT-TTGC.....EEE.CTT-C..HHHHCHHCCCH..STTEEETCE...SSS.-HHH CS
  Abhydrolase_6 153 .........................alla.glgllpaaawadlpvpl.....lvl.ggeDp..lvprllerlla..qagarlpvvlpgaGH.lphl 211
                                             +l a g+ + +++ ++ +   +     +vl g++D+  +vp    + l   ++  +  ++ +g+GH ++++
     KHJ33330.1 246 yeryaahelckrldpeafgrkgfllQLIAaGWHYKSPEQLKEIGDKVgrdriMVLhGTADRmiTVP--HGEKLIewLQPGTA-IIKEGTGHgFILE 338
                    33333333344333333333333332222233344566666666666999987776799**88777..55777774444444.9999****55444 PP

                    HS CS
  Abhydrolase_6 212 ee 213
                     e
     KHJ33330.1 339 -E 339
                    .4 PP

>> Abhydrolase_4  TAP-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.44   7.9e+02       3      26 ..     209     231 ..     206     237 .. 0.85
   2 !   17.4   0.0   1.9e-06    0.0035      14      78 ..     273     338 ..     260     355 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.44
  Abhydrolase_4   3 vfgaalaesllsCagwpvspqrpr 26 
                    +f++++ +++  C   p ++++++
     KHJ33330.1 209 LFSDEWLNEP-DCTEVPSPGTPNV 231
                    5999******.5******999876 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 1.9e-06
  Abhydrolase_4  14 sCagwpvspqrprdestakg.aapvLllqnerDpaTPyegakklakalggavlvtvegeGHgalaa 78 
                      agw +++ ++ +e+ +k+   ++++l ++ D +     ++kl + l+ ++ +++eg+GHg++ +
     KHJ33330.1 273 IAAGWHYKSPEQLKEIGDKVgRDRIMVLHGTADRMITVPHGEKLIEWLQPGTAIIKEGTGHGFILE 338
                    4689************976637****************************************9864 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0016       2.8      50      77 ..     125     152 ..      82     158 .. 0.85
   2 !    9.0   0.0   0.00049      0.87     144     171 ..     295     328 ..     278     346 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0016
                   HHHHHHHHTTS--GGGEEEEEETHHHHH CS
  Peptidase_S9  50 aaaealakegyvdserlaitGgSyGGyl 77 
                   +++e l + ++++++++ i G S GG+ 
    KHJ33330.1 125 DVIEILDALKWTKQRQVHIIGISMGGMI 152
                   4566666669****************85 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00049
                   -EEEEEEETT-SSS-THHHHHHHHHHH......- CS
  Peptidase_S9 144 pplLlihGlaDdrvppaealklvaaLq......k 171
                    +++++hG+aD  +++ +++kl++ Lq      k
    KHJ33330.1 295 DRIMVLHGTADRMITVPHGEKLIEWLQpgtaiiK 328
                   589*********************9996554444 PP

>> DUF1100  Alpha/beta hydrolase of unknown function (DUF1100)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   1.3e-06    0.0024     196     292 ..      72     170 ..      58     195 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.3e-06
     DUF1100 196 saGldslqtdmyrlfrdylakkd..iamltidlpsvGasskwkltedssllhqavlkeladvpyvdhtrvgliGfrfGanvavrlaflesekvkavval 292
                   Gl s++t + r   +y  +++   ++l  d   +G s k  l   +s +  +v++ l  + +   ++v +iG  +G+ +   +a+l ++++ +   +
  KHJ33330.1  72 VMGLGSIKTSWQRQTLKYGHEQGdkYSVLIFDNRGIGKSDKPILRYSTSEMALDVIEILDALKWTKQRQVHIIGISMGGMIGQEIAYLIPQRICSLNLM 170
                 46899999988887777765554237899***************************************************************9776543 PP

>> UPF0227  Uncharacterised protein family (UPF0227)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0023       4.1      42      83 ..     122     163 ..     110     208 .. 0.81
   2 !    6.5   0.0    0.0039         7     134     172 ..     294     335 ..     276     349 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0023
     UPF0227  42 pqqalkeleklvaelgddnillvGssLGGyyatrlgerfglr 83 
                 ++  + e+  +++ ++++++ ++G s+GG   + ++ +  +r
  KHJ33330.1 122 MALDVIEILDALKWTKQRQVHIIGISMGGMIGQEIAYLIPQR 163
                 5555566777788888899************99998776655 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0039
     UPF0227 134 perilvllskqDevldy...rravaefraaaeiveddgdHaf 172
                 ++ri+vl++++D ++ +   ++ ++ +++   i+++++ H+f
  KHJ33330.1 294 RDRIMVLHGTADRMITVphgEKLIEWLQPGTAIIKEGTGHGF 335
                 79*************998889999****************99 PP

>> Lipase_2  Lipase (class 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   7.3e-05      0.13      47      90 ..     112     154 ..      67     163 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 7.3e-05
    Lipase_2  47 tslerlekCeyvkqlRklilaVlkyTgakkvdivahsmGvpiaR 90 
                 +++ r  + e    + +++   lk+T++++v i++ smG++i  
  KHJ33330.1 112 KPILRYSTSEMALDVIEILD-ALKWTKQRQVHIIGISMGGMIGQ 154
                 55555555555555555444.4789****************975 PP

>> Thioesterase  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   7.7e-05      0.14      54      89 ..     128     162 ..     117     189 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 7.7e-05
                   HHHHHHHHH-SSSSEEEEEETHHHHHHHHHHHHHHH CS
  Thioesterase  54 eyaealrqiqpegPyalfGhSlGgllAfevArqLes 89 
                   e+++al++++++  ++++G S+Gg++ +e+A    +
    KHJ33330.1 128 EILDALKWTKQR-QVHIIGISMGGMIGQEIAYLIPQ 162
                   789999*****9.9****************976655 PP

>> PGAP1  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00012      0.21      79     112 ..     129     160 ..     117     212 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00012
       PGAP1  79 IlslysssekeptsviliGHSmGGivaraaltlk 112
                 Il+    + +++++v +iG SmGG++ + ++ l 
  KHJ33330.1 129 ILDAL--KWTKQRQVHIIGISMGGMIGQEIAYLI 160
                 44444..678999*************99877654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 2806.73
//
Query:       KHJ33331.1  [L=154]
Description: putative agglutinin ssa-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-10   40.9   6.8    7.2e-08   33.1   0.5    2.7  3  RicinB_lectin_2  Ricin-type beta-trefoil lectin domain-like


Domain annotation for each model (and alignments):
>> RicinB_lectin_2  Ricin-type beta-trefoil lectin domain-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.048   8.6e+02      59      87 ..       6      35 ..       3      37 .. 0.75
   2 !   33.1   0.5     4e-12   7.2e-08       2      88 ..      46     136 ..      45     137 .. 0.83
   3 !   17.5   1.0   2.8e-07    0.0051       4      58 ..      96     153 ..      96     154 .] 0.86

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.048
                     SSEEEEEETTTT.EEEEECGCS-STTEEEE CS
  RicinB_lectin_2 59 dgtyrivnkasg.kvLdvaggstanGtnvq 87
                      g y+iv+ +++    + +ggst++G  v 
       KHJ33331.1  6 PGIYEIVPFQTPkFSCNSWGGSTNEGEEVK 35
                     578999999999445777878889888876 PP

  == domain 2  score: 33.1 bits;  conditional E-value: 4e-12
                      CGEEEE....CETTTTEEEEECTSSSEEEECGCCTBCTTEEEEEE-TTT-GGCEEEEECCESS...EEEEEETTTTEEEEECGCS-STTEEEEE CS
  RicinB_lectin_2   2 nQqWtl....gsggdgyytiknvasgkvLdvaggstanganvqqwtcsgaanqqWrledtgdg...tyrivnkasgkvLdvaggstanGtnvqq 88 
                      n  W++    gsg+d  y i nv++g +L+++g  t+    +   +  ++++ +W+l++++++    +++ +  s   L+v ++++a+Gt+v+ 
       KHJ33331.1  46 NTLWEValasGSGADAEYYIINVKNGYFLAATGVTTN---ITCKHSIPTDPSIRWKLRPATTNgydVWQVDSLSSYGQLNVRESGQASGTDVIS 136
                      678***98744666778*****************999...66677777*********554444456****************8899*****986 PP

  == domain 3  score: 17.5 bits;  conditional E-value: 2.8e-07
                      EEEE...CETTTTEEEEECTSSSEEEECGCCTBCTTEEEEEE-TTT-GGCEEEEECCE CS
  RicinB_lectin_2   4 qWtl...gsggdgyytiknvasgkvLdvaggstanganvqqwtcsgaanqqWrledtg 58 
                      +W+l   +++g +++++ + +s   L+v ++++a+g+ v  ++ s+++n++W++++ g
       KHJ33331.1  96 RWKLrpaTTNGYDVWQVDSLSSYGQLNVRESGQASGTDVISYQISSTDNTKWYFDPVG 153
                      69996533444457***************************************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1175.22
//
Query:       KHJ33332.1  [L=124]
Description: putative sucrose transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 926.75
//
Query:       KHJ33333.1  [L=803]
Description: hypothetical protein EV44_g5356 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.013   15.7   0.5        3.5    7.9   0.0    3.4  3  PPR_2     PPR repeat family


Domain annotation for each model (and alignments):
>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0002       3.5      17      46 ..     375     404 ..     371     407 .. 0.85
   2 ?    3.9   0.0    0.0035        64      24      38 ..     452     466 ..     450     475 .. 0.81
   3 ?   -2.4   0.0      0.33   5.9e+03      10      33 ..     708     731 ..     703     733 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0002
       PPR_2  17 gkveeAfklfneMkkrglePnsyTysilik 46 
                 ++++eA+  f++ kk+g +Pn   y  +++
  KHJ33333.1 375 RDIHEAWAAFMQYKKKGGQPNLDMYLAMFQ 404
                 6899*****************887777776 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.0035
       PPR_2  24 klfneMkkrglePns 38 
                 +l++eM + gl+P +
  KHJ33333.1 452 DLYSEMLRSGLKPKN 466
                 79**********965 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 0.33
       PPR_2  10 IsglckkgkveeAfklfneMkkrg 33 
                 + +l+  +++ee ++ + +M +++
  KHJ33333.1 708 MRCLALVKDYEEILRTLVWMAQNS 731
                 555556789999999999998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (803 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.41
# Mc/sec: 5846.94
//
Query:       KHJ33334.1  [L=265]
Description: putative proteasome component c5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-29  101.2   1.1      9e-29  100.3   0.4    1.7  2  Proteasome  Proteasome subunit


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.3   0.4     5e-33     9e-29       2     154 ..      40     194 ..      39     200 .. 0.92
   2 ?   -2.3   0.0      0.15   2.6e+03     158     190 .]     218     250 ..     208     250 .. 0.75

  Alignments for each domain:
  == domain 1  score: 100.3 bits;  conditional E-value: 5e-33
                 HHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEET........TEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHH CS
  Proteasome   2 kkGttvvGikgkdgvvlaadkratagskllskstveKifkidd........higvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaakl 92 
                 ++G+++++i g+d++++a+d+r+t+g  + s+ t  K+fki          +++++++G aaD+++l + + + +++yr+++g+ ++v+    ++a++l
  KHJ33334.1  40 DNGGSTLAISGSDFAIIAGDTRSTSGYNINSRYT-PKVFKIGGttssqddaTLVLSVVGFAADGQALKEEIDRVIKMYRYQHGKSMSVK----ACAQRL 133
                 68***************************99996.******86222222225799**********************************....99**** PP

                 HHHHHHCTTTTTSEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHH CS
  Proteasome  93 qaytqrsgrrpfgvslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekey 154
                 +  ++++++ p++v ++++g+de+g+  +y+ dp Gsy +e ++ a+G ++  ++++l++++
  KHJ33334.1 134 SIILYQKRFFPYYVTAILGGLDEDGRGAVYSYDPVGSYERE-QCRAAGAAASLIMPFLDNQV 194
                 *****************************************.5****************998 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.15
                 BSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEEE CS
  Proteasome 158 ltleeavelavkalkealerdklsgknievavi 190
                 l + e + l++ a  +a+er    g+++++ +i
  KHJ33334.1 218 LPRSEVEALVKDAFDSAVERHIEVGDGLQMMII 250
                 556788889999999999998888888777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       565  (0.0315132); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2152.84
//
Query:       KHJ33335.1  [L=411]
Description: putative rna- rbd [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.1e-60  202.2   0.0    8.2e-60  201.5   0.0    1.3  1  YTH           YT521-B-like domain
     0.0018   18.1   0.0     0.0066   16.3   0.0    1.8  2  RRM_occluded  Occluded RNA-recognition motif


Domain annotation for each model (and alignments):
>> YTH  YT521-B-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  201.5   0.0   9.2e-64   8.2e-60       2     166 .]     185     382 ..     184     382 .. 0.89

  Alignments for each domain:
  == domain 1  score: 201.5 bits;  conditional E-value: 9.2e-64
                 EEEEEEESHHHHHHHHHHHCEEEEEHHHHHHHHHHHHCS.EEEEEEEETTTSEEEEEEEEE........SEEBTTS-...................... CS
         YTH   2 ryFilKslseedlekSvetgvWatqkhnekkLdqafrtsekVyLiFsvnksgeFfGyArmas..ssssssavelassaseesase.............. 84 
                 ++F++Ksl+ +dle+Sv++++Watq+hnek+L++af+ts++V+LiFs+nksge+fGyA+m+s  ++++++ +e++++a++ ++                
  KHJ33335.1 185 KFFVVKSLTVDDLELSVKNKIWATQSHNEKVLNEAFKTSDNVFLIFSANKSGEYFGYAKMTSpiNDDPAAMIEFTPNAQSAKDPVppkiilspasgyvp 283
                 8*************************************************************987888899999999555544449************* PP

                 ...........GGCC--TTEE.........................EEEEEEEEEEEEEEGHHCCCHCHCCCTT.BGCG--TTEEE-HHHHHHHHHHHC CS
         YTH  85 ...sidasaeessfweaeskkeeas..............eeskswgkpFkveWistkrlpfsrtrhlrnpwnenreVkvsrdgtelepsvGrqLlelfe 166
                    +id+ +++++fwe  ++ e ++                 k wgkpF+veWist rlpf+rtr+lrnpwn+nreVk++rdgtele s+G++L+ lf+
  KHJ33335.1 284 kgrIIDDLNRGTVFWEVIRDGERDEeadeiesdkstpeePPPKIWGKPFEVEWISTVRLPFHRTRGLRNPWNSNREVKIARDGTELETSIGKRLVALFH 382
                 ***77777777777777666544446777777777776677899****************************************************996 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   7.4e-07    0.0066      17      67 ..      67     116 ..      57     119 .. 0.91
   2 ?   -2.2   0.0      0.43   3.9e+03      38      53 ..     251     266 ..     249     266 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 7.4e-07
  RRM_occluded  17 riralveekegeikkivLvpdheGAivefkdekiagkasLaLdgsefegkk 67 
                    +r++++e+ + ++ ++L ++ ++A+  f+de + + a L ++ s+f+  +
    KHJ33335.1  67 LVRHVCKET-HGLESLFLISKSNCAFANFQDEDACAIAHLRIHDSRFHSVR 116
                   588999999.************************************98765 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.43
  RRM_occluded  38 heGAivefkdekiagk 53 
                     +A++ef+ +++ +k
    KHJ33335.1 251 DPAAMIEFTPNAQSAK 266
                   5689****99999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 3016.09
//
Query:       KHJ33336.1  [L=1941]
Description: putative phosphatidylinositol 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.8e-41  140.5   0.1    1.5e-38  133.1   0.1    2.5  1  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
      7e-30  103.8   0.7      7e-30  103.8   0.7    2.0  2  PI3Ka           Phosphoinositide 3-kinase family, accessory d
  ------ inclusion threshold ------
      0.073   12.4   0.0       0.13   11.6   0.0    1.3  1  DUF4135         Domain of unknown function (DUF4135)


Domain annotation for each model (and alignments):
>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.1   0.1   2.5e-42   1.5e-38       2     249 ..    1684    1889 ..    1683    1890 .. 0.96

  Alignments for each domain:
  == domain 1  score: 133.1 bits;  conditional E-value: 2.5e-42
                      EEEEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHHHHHHHHHCHC CS
  PI3_PI4_kinase    2 sagiykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekkgvpptasveslrvaldk 94  
                       + i+kvgdd+rqd l +q++  + e+ ++ +++      + +y+v +++++cg+i ++++s + + l +e                      
      KHJ33336.1 1684 QSAIFKVGDDCRQDVLALQMIAAFREIFQNVGLDVY----VFPYRVTATAPGCGVIDVLPNSISRDMLGREAV-------------------- 1752
                      5789*******************************9....*******************************98.................... PP

                      HCCHHHHHCCHHHHHHTSSTTHHHHHHHHHSSSHH..HHHHHHHHHHHHHHHHHHHHHHHT-TT--TTTEEEETTTSEEEESSTTTCCTCSHC CS
  PI3_PI4_kinase   95 kklkkekklkfekrtalkpksgllqeFvkkspsae..ewlearkqFvrslaklsvldyilgngDRhldNilvdktsgklihIDfGlilpdewk 185 
                                          +gl+++Fv+k+ +++   ++ear++Fv+s+a +s+++y+l+  DRh++Ni++ ++ g+++hIDfG++++ ++ 
      KHJ33336.1 1753 --------------------NGLYDYFVSKYGNEDslRFQEARSNFVKSMAAYSIISYLLQFKDRHNGNIMI-DDAGHIVHIDFGFCFDIAPG 1824
                      ....................89*********99964489999******************************.***************99999 PP

                      SSSS-.SSSSSS-THHHHHHT...STTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCSSC CS
  PI3_PI4_kinase  186 llpfpqekvPfrltrelvlai...dpskdeglfresceealealrrdqnlltrllkkavkdglilwe 249 
                        +f  e+ Pf+lt e+++++   ++ + ++lf+e+ ++a+ a r+ ++ l ++  +++++gl++++
      KHJ33336.1 1825 GVKF--ERAPFKLTSEMIAVMggnTDHQIFKLFEELSVRAFLASRQYTQQLSQIVLLMMDSGLPCFK 1889
                      9999..59*************9888999999*********************************986 PP

>> PI3Ka  Phosphoinositide 3-kinase family, accessory domain (PIK domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.1       1.6   9.5e+03      43      95 ..     359     408 ..     352     415 .. 0.69
   2 !  103.8   0.7   1.2e-33     7e-30      16     181 ..    1400    1568 ..    1389    1572 .. 0.89

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 1.6
                 SGGGHHHHHTTS-SSSHHHHHHHHHHHTTSHHTTHHHHTTTTSTTS--HHHHH CS
       PI3Ka  43 nkkaltklLqsvkwseesevkealelldsWaeididdaLeLLdskfkdesvre 95 
                 ++ al  +L++v++++ +    ++ +l sW e   +d +++ d + ++   r+
  KHJ33336.1 359 KAGALVCFLNCVTFNKITV---EVDVLISWLESTLADPIQMADKMLANIVLRS 408
                 5667888999999998883...4555667777777777777666666666665 PP

  == domain 2  score: 103.8 bits;  conditional E-value: 1.2e-33
                  HCHS-TTS---HHHHHHHHHTHHHHCTSGGGHHHHHTTS-SSSHHHHHHHHHHHTTSHHTTHHHHTTTTSTTS--.HHHHHHHHHHHHHSHHHHHHH CS
       PI3Ka   16 iiakdPltkltaeekeliwkfryylknnkkaltklLqsvkwseesevkealelldsWaeididdaLeLLdskfkd.esvreyavkvLekasdeelll 111 
                  ++ + P+tkl  e + l+ kf    ++n++a+ +lL     s  ++v  +l+ l +W++++++ a+ ++ +++ + ++v +ya + Le+   +  ++
  KHJ33336.1 1400 LFMRFPSTKLHREIRLLLLKFPEKATSNPEAIQSLLG---DSLPDDVSSQLKYLLYWEPVNPVSAITYFLPQYRNePYVLQYAMRALESHPVDVTFF 1493
                  66777*******************************8...566788999**************************9********************* PP

                  HHHHHHHHHGGSSSSSSHHHHHHHHHHHHSHHHHHHHHHHHHHHH.......HCCTHHHHHHHHHHHHHHHCHHHHH CS
       PI3Ka  112 YllQLVqalkyepikdsalaefLlkralknkrlghfffWyLksei.......edkevserfksllesylrklskslk 181 
                  Y++Q+Vqal+y+    ++++++++++a+++++++h+++W++k+++          +++++++++++++++++sk++k
  KHJ33336.1 1494 YVPQIVQALRYD--TLGYIERYIIETAKISQLFAHQIIWNMKANSfkdedsqIPDSLKPTLDKVMSRMIKEFSKNAK 1568
                  ************..99*****************************99954432333477788888888888887765 PP

>> DUF4135  Domain of unknown function (DUF4135)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.1e-05      0.13     129     175 ..    1772    1819 ..    1741    1914 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.1e-05
     DUF4135  129 eeeverfYrraGallallyllggtDlheeNl.iasgeqpvliDlEtll 175 
                  +e+ ++f + + a+  ++yll+ +D h++N+ i +++++v iD+  ++
  KHJ33336.1 1772 QEARSNFVKSMAAYSIISYLLQFKDRHNGNImIDDAGHIVHIDFGFCF 1819
                  556678888899999****************999*********98888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1941 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.98u 0.29s 00:00:01.27 Elapsed: 00:00:00.44
# Mc/sec: 13326.99
//
Query:       KHJ33337.1  [L=166]
Description: hypothetical protein EV44_g3434 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-08   34.6   0.1    4.3e-08   33.1   0.0    1.8  2  Integrase_H2C2  Integrase zinc binding domain


Domain annotation for each model (and alignments):
>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.45     8e+03      32      47 ..      62      77 ..      55      81 .. 0.58
   2 !   33.1   0.0   2.4e-12   4.3e-08       4      36 ..     132     166 .]     130     166 .] 0.95

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.45
  Integrase_H2C2 32 ryyWpgmrkdvkkyvk 47
                    +++  ++++ + + +k
      KHJ33337.1 62 TFHQTSLTEAISQACK 77
                    4555555555555555 PP

  == domain 2  score: 33.1 bits;  conditional E-value: 2.4e-12
  Integrase_H2C2   4 slrkeilkeaHds..agHlGiektlerlrrryyWp 36 
                     +l  +il + H+s  +gH+G+ ktl++l+r+y+Wp
      KHJ33337.1 132 NLSLKILCRSHSSipTGHPGRVKTLDLLQRTYWWP 166
                     67789*****************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       856  (0.0477439); expected 358.6 (0.02)
Passed bias filter:                      745  (0.0415528); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1254.14
//
Query:       KHJ33338.1  [L=485]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.4e-86  289.0   0.1    6.5e-81  272.0   0.0    2.3  2  AFG1_ATPase     AFG1-like ATPase
    4.8e-05   23.8   0.0     0.0069   16.8   0.0    2.5  2  AAA_16          AAA ATPase domain
      6e-05   23.1   0.0    0.00019   21.5   0.0    1.8  1  AAA_14          AAA domain
    9.6e-05   22.8   0.3    0.00052   20.4   0.0    2.3  2  AAA             ATPase family associated with various cellula
     0.0061   16.8   0.0      0.017   15.4   0.0    1.9  1  AAA_22          AAA domain
     0.0062   16.5   0.1       0.12   12.2   0.0    2.9  2  ATPase_2        ATPase domain predominantly from Archaea
     0.0067   16.4   0.0      0.013   15.4   0.0    1.5  1  TsaE            Threonylcarbamoyl adenosine biosynthesis prot
  ------ inclusion threshold ------
      0.027   14.5   0.3       0.23   11.4   0.0    2.5  2  AAA_5           AAA domain (dynein-related subfamily)
      0.034   14.1   0.0      0.086   12.8   0.0    1.6  1  NACHT           NACHT domain
      0.036   13.9   2.0        2.2    8.1   0.2    2.9  3  Bac_DnaA        Bacterial dnaA  protein
      0.044   13.2   0.0        0.1   12.0   0.0    1.5  1  Mg_chelatase    Magnesium chelatase, subunit ChlI
      0.048   13.4   0.2       0.11   12.2   0.2    1.6  1  FlgO            FlgO protein
      0.075   12.5   0.1       0.23   11.0   0.0    1.8  2  AAA_7           P-loop containing dynein motor region
      0.093   13.1   0.0       0.51   10.7   0.0    2.3  2  RNA_helicase    RNA helicase
      0.093   13.2   0.5        3.7    8.0   0.0    3.1  3  UDPG_MGDP_dh_C  UDP-glucose/GDP-mannose dehydrogenase family,
       0.32   11.3   1.5         19    5.6   0.1    2.5  2  Cas6_N          Cas6 N-terminal domain


Domain annotation for each model (and alignments):
>> AFG1_ATPase  AFG1-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  272.0   0.0   5.8e-84   6.5e-81       5     340 ..      41     406 ..      38     411 .. 0.90
   2 !   14.5   0.0   1.1e-05     0.012     330     361 ..     446     477 ..     437     478 .. 0.89

  Alignments for each domain:
  == domain 1  score: 272.0 bits;  conditional E-value: 5.8e-84
  AFG1_ATPase   5 qryekelqrgeivadaaqaeavealdrlteelaaqdlarks...............salgklfgrkrksvep.......vrglYlwGgvGrGKtylmd 80 
                  + y+ +++ g  ++d+ q  +v++l+rl +el+  +  r s               ++l  +++++ + +++       ++glYl+G vG GKt+lmd
   KHJ33338.1  41 KEYDLRVAAGYLRNDNFQRGIVQELQRLHDELQVYKPSRVSrlkikhseqlhmslyKKLSSILFKHSEVENAlavaghmPKGLYLYGDVGCGKTMLMD 138
                  67999999999*******************888888877777888888899986664444445555544332223333379***************** PP

  AFG1_ATPase  81 lffeslpvek..krrvhfhafmarvhdeltklr....kekdplaivadrlaeearvlCfDEfevsDiadamllsrLleaLfargvtlvaTSNiaPedL 172
                  lf+e lp ++  k r hfh+f+++ h++++k r    +  d ++ va ++ae  ++lCfDEf+ +D+adam+l r le L+  gv lv+TSN+ P+dL
   KHJ33338.1 139 LFYETLPAKTvsKSRFHFHNFIQDAHKRIHKIRlkhgNDIDEIPLVAAEIAEMGTILCFDEFQCTDVADAMILRRFLETLMSYGVILVTTSNRHPDDL 236
                  *******9854499*****************99988778899******************************************************** PP

  AFG1_ATPase 173 ykdglqrqrFLpaIdlleshlevlevdggvDYRlrklrqaevylapldeaaeaaldklfkelts..gepeaestlevkaRklrvraaagdlvrfsfae 268
                  y++g+qr+ F+p Idll++ l v+++++gvDYR    +   vy +pld++a ++ ++ fk l +   ++ ++++ +v +Rk+ v+++ g  + f+f e
   KHJ33338.1 237 YRNGIQRESFIPCIDLLKNCLSVINLNSGVDYRKIPRPSSDVYYTPLDSHAISHAERWFKYLGDfpNDAPHSESKTVWGRKIFVPRVSGRSAMFKFDE 334
                  ***************************************************************9955566677899********************** PP

  AFG1_ATPase 269 lceaarsqsdYlalaerfhtvlledVpvltkakedaarRfiaLvDelYdadvklvvsaevaleelyeagrle 340
                  l  +++s+ dY++l++ + +++++d+ ++t  ++d arRfi+ +D++Y+a + +v+   v++++l+   +  
   KHJ33338.1 335 LIGRPMSAADYIELTKSYDAFIVTDIYGMTFQERDLARRFITFLDAVYEARAIVVLTSAVEFKQLFLSRDEV 406
                  ****************************************************************99877655 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 1.1e-05
  AFG1_ATPase 330 leelyeagrlefefeRtaSRLlelqsedylar 361
                   + ++++++ +f f R++SRL e+ s+++++r
   KHJ33338.1 446 KSSIFSGDEEKFAFSRALSRLSEMGSQEWVNR 477
                  56789999*********************998 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   6.2e-06    0.0069      13      63 ..     110     159 ..     106     177 .. 0.74
   2 ?    4.1   0.0     0.049        54     135     166 ..     191     222 ..     176     226 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 6.2e-06
      AAA_16  13 lsalervrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdql 63 
                 ++al  v+ + p  ++l+G+ G+GK+ l++ +++ l ++ +   r +++ +
  KHJ33338.1 110 ENALA-VAGHMPKGLYLYGDVGCGKTMLMDLFYETLPAKTVSKSRFHFHNF 159
                 56665.778889**********************99999322244444443 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.049
      AAA_16 135 rplvlvlDdlqwadeaslqllaaLlrlleskp 166
                   ++l++D++q  d a++++l+ +l++l s  
  KHJ33338.1 191 MGTILCFDEFQCTDVADAMILRRFLETLMSYG 222
                 4589*******************999876545 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   1.7e-07   0.00019       8     102 ..     126     231 ..     120     235 .. 0.70

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 1.7e-07
      AAA_14   8 tGaRrvGKTtllkqlikell...vkkesilyinldderdkkladpe........kllelileklkeekktylflDEiqevpewekal.kslvdeg.knl 93 
                  G   +GKT+l+  ++++l    v+k+++ + n+ ++  k++ + +        ++  l+ +++  e  t+l++DE q  + +  ++ ++++++  + +
  KHJ33338.1 126 YGDVGCGKTMLMDLFYETLPaktVSKSRFHFHNFIQDAHKRIHKIRlkhgndidEI-PLVAAEIA-EMGTILCFDEFQCTDVADAMIlRRFLETLmSYG 222
                 56668******988887766***************999976664433334422122.22222233.5899********999988765155555445667 PP

      AAA_14  94 dvivtGSns 102
                  ++vt Sn 
  KHJ33338.1 223 VILVTTSNR 231
                 888888885 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   4.7e-07   0.00052       1     116 [.     123     237 ..     123     247 .. 0.67
   2 ?   -1.0   0.3       1.9   2.2e+03      75      98 ..     416     439 ..     363     459 .. 0.71

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 4.7e-07
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSS...........STTHHHHHHHHHHHHHHHTSTS.EEEEEETGGGHHHHHTTCCCHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellsk...........yvgesekkirelfkeakekakp.silfiDEidalaksrsgseseeeervvn 87 
                 ++lyG  G+GKT+l+    ++l ++ ++ s   +  +           +  +  ++i e+   a e a+  +il +DE+     ++           + 
  KHJ33338.1 123 LYLYGDVGCGKTMLMDLFYETLPAKTVSKSRFHFH-NfiqdahkrihkIRLKHGNDIDEIPLVAAEIAEMgTILCFDEFQCTDVAD-----------AM 209
                 58*******************96555555554444.40111111111155555555555555555555455999999999888888...........88 PP

                 HHHHHHHHTTTSSSTEEEEEEESS.GGGST CS
         AAA  88 qLlteldgvkkkeskvivigatnr.pdkld 116
                  L ++l+ + ++   vi+++++nr pd+l 
  KHJ33338.1 210 ILRRFLETLMSY--GVILVTTSNRhPDDLY 237
                 888999999886..6999999999877765 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.9
                 TTCCCHHHHHHHHHHHHHHHHTTT CS
         AAA  75 sgseseeeervvnqLlteldgvkk 98 
                 ++++ + +e+v + + +++d+++ 
  KHJ33338.1 416 NEKTLTTGEEVEDSMRNMMDDLNL 439
                 445556667777777777777655 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.5e-05     0.017       8      51 ..     123     176 ..     119     228 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.5e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaee..........erpevvfvtlpsst 51 
                 l+++G +G+GKT+l+  + e+l++    +           +++++ ++ l++++
  KHJ33338.1 123 LYLYGDVGCGKTMLMDLFYETLPAKTVSKSrfhfhnfiqdAHKRIHKIRLKHGN 176
                 79*******************986544444666666666555555565555555 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   0.0   0.00011      0.12      23      65 ..     123     167 ..      80     216 .. 0.84
   2 ?    1.1   0.1      0.28   3.2e+02     142     172 ..     371     398 ..     273     451 .. 0.56

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00011
    ATPase_2  23 yfiYGpegsGKtaLlkeiienl..edkdkyviyyialreesiskl 65 
                 +++YG  g+GKt L+  ++e l  +  +k ++ + ++ +++ +++
  KHJ33338.1 123 LYLYGDVGCGKTMLMDLFYETLpaKTVSKSRFHFHNFIQDAHKRI 167
                 689*****************9965666667777777766665555 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.28
    ATPase_2 142 vkeLlnliesltkekhlcvviclsSeglfie 172
                    ++++++     ++++ +++l+S   f +
  KHJ33338.1 371 ARRFITFLDA---VYEARAIVVLTSAVEFKQ 398
                 3333333333...555555555555544444 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   1.2e-05     0.013      21      59 ..     114     160 ..      86     201 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.2e-05
                 E........EEEEESTTSSHHHHHHHHHHHTT------TTTTSEEEE CS
        TsaE  21 v........ilLeGdLGaGKTtlvrglakalgveevkSPTFtlveeY 59 
                 +        ++L+Gd+G+GKT+l+  + ++l  ++v+   F   +  
  KHJ33338.1 114 AvaghmpkgLYLYGDVGCGKTMLMDLFYETLPAKTVSKSRFHFHNFI 160
                 0333335559********************99888877777766655 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00021      0.23       2      76 ..     123     202 ..     122     218 .. 0.60
   2 ?   -0.3   0.2      0.84   9.4e+02      29      92 ..     387     444 ..     368     483 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00021
                 EEEE--SSSSHHHHHHHGGGGB...S--EEEEE--TT--HHHHH--B--..........--------...G-SEEEEESGGG CS
       AAA_5   2 vlLvGppGtgKselaerlaaal...nreveyvqltrdtteedlkgrreik.ngttslvdsplvraar...egeilvlDEver 76 
                 + L G+ G+gK++l++ + + l   + +     ++ +++ ++ k   +i+ + +    + plv aa+    g il++DE++ 
  KHJ33338.1 123 LYLYGDVGCGKTMLMDLFYETLpakTVSKSRFHFHNFIQDAH-KRIHKIRlKHGNDIDEIPLV-AAEiaeMGTILCFDEFQC 202
                 679*******************76633333334444443332.22222224444444555555.333344999999999874 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.84
                 EEE--TT--HHHHH--B--.........--------G-SEEEEESGGG--HHHHHHHHHHHHSS CS
       AAA_5  29 yvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEveraesevlnsLlslleer 92 
                 +v lt+  + ++l+ +r+      + ++ ++ ++++e+ ++  +Eve   +++++ L+  +e+ 
  KHJ33338.1 387 IVVLTSAVEFKQLFLSRD------EVKERKIIQEGNEKTLTTGEEVEDSMRNMMDDLNLNMEDI 444
                 444444455555555555......6677777777778888888888877777777777666654 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   7.6e-05     0.086       4      42 ..     124     160 ..     122     174 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 7.6e-05
                 EEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEEEET CS
       NACHT   4 ilqGeaGsGKTtLlqklalawaegklpqgafklvFflsl 42 
                  l G+ G+GKT+L+  + +++ +++  +   ++ F+ + 
  KHJ33338.1 124 YLYGDVGCGKTMLMDLFYETLPAKTVSKS--RFHFHNFI 160
                 589*********************99995..56665554 PP

>> Bac_DnaA  Bacterial dnaA  protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       3.5   3.9e+03      69      85 ..      51      67 ..      41      79 .. 0.66
   2 ?    8.1   0.2    0.0019       2.2      34      58 ..     120     144 ..     105     238 .. 0.71
   3 ?    4.3   0.1     0.028        31      90     152 ..     344     407 ..     327     432 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 3.5
                EEEHHHHHHHHHHHHHT CS
    Bac_DnaA 69 YltaeeFlnelvkalrd 85
                Yl  ++F + +v+ l+ 
  KHJ33338.1 51 YLRNDNFQRGIVQELQR 67
                77788888877777765 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0019
                 S--EEEE-SSSSSHHHHHHHHHHHH CS
    Bac_DnaA  34 ynPlfiygevGlGktHLlkaignev 58 
                    l++yg+vG Gkt L++    ++
  KHJ33338.1 120 PKGLYLYGDVGCGKTMLMDLFYETL 144
                 45699************98655544 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.028
                 HHHHHHTT-SEEEEE-GGGGTT-HH.HHHHHHHHHHHHHTTT-EEEEEESS-TTT-SS--HHHH CS
    Bac_DnaA  90 efkeklrkvDvLliDDiqflagkek.tqeelfhtfnalleegkqvvlssDrsPkeleeledrlr 152
                 ++ e  ++ D+ ++ Di  ++ +e+     +++ ++a++e+   vvl+s  + k+l    d ++
  KHJ33338.1 344 DYIELTKSYDAFIVTDIYGMTFQERdLARRFITFLDAVYEARAIVVLTSAVEFKQLFLSRDEVK 407
                 555667889********988766642788999999*************9888888766555555 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   9.1e-05       0.1      10      51 ..     108     149 ..     100     169 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 9.1e-05
  Mg_chelatase  10 eakraleiaaaGgHnlllvGppGsGKtmlakrlpsllpplse 51 
                   e ++al +a      l l+G  G+GKtml   + + lp+ + 
    KHJ33338.1 108 EVENALAVAGHMPKGLYLYGDVGCGKTMLMDLFYETLPAKTV 149
                   567788888777889****************99999998765 PP

>> FlgO  FlgO protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   9.8e-05      0.11      31      88 ..     415     471 ..     368     477 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 9.8e-05
        FlgO  31 dlqktstLGrqlaEsliselqqrgykvvelkltnsisvteegefvlsRdlkelsakhn 88 
                   +kt t G+ +++s+ + +   ++++ ++k++ si+  +e  f++sR l++ls++ +
  KHJ33338.1 415 GNEKTLTTGEEVEDSMRNMMDDLNLNMEDIKKS-SIFSGDEEKFAFSRALSRLSEMGS 471
                 56788899***********************99.9******************99765 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0    0.0002      0.23      34      72 ..     121     159 ..     109     167 .. 0.87
   2 ?   -2.7   0.1       3.2   3.5e+03      99     115 ..     427     443 ..     417     447 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0002
       AAA_7  34 kpvllvGptGtGKtviikdllkkldkekylsltinfsaq 72 
                 k + l+G++G+GKt+++  + ++l+ ++++   + f++ 
  KHJ33338.1 121 KGLYLYGDVGCGKTMLMDLFYETLPAKTVSKSRFHFHNF 159
                 557899*******************99999999998765 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 3.2
       AAA_7  99 gkklvvFvDDlnmpake 115
                 + ++  ++DDln+ + +
  KHJ33338.1 427 EDSMRNMMDDLNLNMED 443
                 56777889999988776 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00046      0.51       1      26 [.     123     148 ..     123     182 .. 0.78
   2 ?   -1.8   0.0       3.6     4e+03      15      38 ..     430     453 ..     428     460 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00046
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   ++lyG+ g+GK++l++ + ++l  k 
    KHJ33338.1 123 LYLYGDVGCGKTMLMDLFYETLPAKT 148
                   69**************9999887655 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 3.6
  RNA_helicase  15 akeLakallkklklkkkdsvysrn 38 
                   +++++++l  +++++kk+s++s+ 
    KHJ33338.1 430 MRNMMDDLNLNMEDIKKSSIFSGD 453
                   566777788788888888887754 PP

>> UDPG_MGDP_dh_C  UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.3   1.4e+03      55      87 ..      15      48 ..       8      59 .. 0.76
   2 ?    0.8   0.0       0.6   6.7e+02      21      58 ..      60      97 ..      57     116 .. 0.73
   3 ?    8.0   0.0    0.0033       3.7      58      83 ..     375     400 ..     342     418 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.3
                    EEES-C.HHHHTT-SEEEE-S--GGGGGS-HHHH CS
  UDPG_MGDP_dh_C 55 evvdsl.eealkgadaiviltehdefkeldlakl 87
                    ++ + l ++ +k +da v+  +h  +ke+dl  +
      KHJ33338.1 15 TLNSRLkSQDVKVIDATVVKNDHGPIKEYDLRVA 48
                    5555565678899999999999999999887655 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.6
                    HHHHHHHHCTSEEEEE-S.STHHCCCCHHGGBTCCEEES CS
  UDPG_MGDP_dh_C 21 diieeLleegaevkiyDP.kvkeeaveaeleekgvevvd 58
                     i++eL++ + e+++y P +v++ +++++ +  ++++++
      KHJ33338.1 60 GIVQELQRLHDELQVYKPsRVSRLKIKHSEQ-LHMSLYK 97
                    58999*************7788888888665.3444333 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0033
                     S-CHHHHTT-SEEEE-S--GGGGGS- CS
  UDPG_MGDP_dh_C  58 dsleealkgadaiviltehdefkeld 83 
                      ++ +a+ +a aiv+lt   efk+l 
      KHJ33338.1 375 ITFLDAVYEARAIVVLTSAVEFKQLF 400
                     36789*******************73 PP

>> Cas6_N  Cas6 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1     0.043        48      30      59 ..      61      91 ..      56     111 .. 0.79
   2 ?    5.6   0.1     0.017        19      38      89 ..     390     440 ..     382     459 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.043
                SSGGGHHHHH---TT-SEEE---BS.TTSB- CS
      Cas6_N 30 lspslsklvesrekyKplrisvlkd.ngrrl 59
                ++++l+ l  + + yKp r+s lk    ++l
  KHJ33338.1 61 IVQELQRLHDELQVYKPSRVSRLKIkHSEQL 91
                678899999999************9444444 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.017
                 HH---TT-SEEE---BSTTSB--S------EE-SSSSEEEEEEEESSSCCTT CS
      Cas6_N  38 vesrekyKplrisvlkdngrrlyaegkkkvrlkagerlsfslsfaledvvee 89 
                 ++s   +K l+ s  ++++r++++eg++k +l+ ge+++ s+  ++ d++ +
  KHJ33338.1 390 LTSAVEFKQLFLSRDEVKERKIIQEGNEK-TLTTGEEVEDSMRNMMDDLNLN 440
                 6788899****************777666.5666666666666665555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       728  (0.0406046); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.61u 0.30s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 3226.03
//
Query:       KHJ33339.1  [L=229]
Description: putative j-type co-chaperone mitochondrial [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-13   51.5   0.8    4.5e-13   49.5   0.4    2.1  2  HSCB_C           HSCB C-terminal oligomerisation domain
    1.3e-06   28.5   0.0    3.7e-06   27.0   0.0    1.8  1  DnaJ             DnaJ domain
  ------ inclusion threshold ------
      0.018   14.9   0.4      0.037   13.9   0.4    1.5  1  HU-CCDC81_bac_2  CCDC81-like prokaryotic HU domain 2


Domain annotation for each model (and alignments):
>> HSCB_C  HSCB C-terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.28   1.7e+03      52      73 ..     114     135 ..      89     136 .. 0.74
   2 !   49.5   0.4   7.6e-17   4.5e-13       3      73 ..     150     219 ..     148     222 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.28
                 TT-HHHHHHHHHHHHHHHHHHH CS
      HSCB_C  52 kkdleaaadllrrlrYlekike 73 
                 ++ ++ ++  l+r +Yl ++++
  KHJ33339.1 114 NEAFAVLKSPLSRAQYLLSLRQ 135
                 4466788888999999998876 PP

  == domain 2  score: 49.5 bits;  conditional E-value: 7.6e-17
                 HHHHHHHHHHHHHHHCGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHH CS
      HSCB_C   3 pefLmevMelrEeleeaeeaadkeeleelkaeveerieeleaeleeafekkdleaaadllrrlrYlekike 73 
                 +++L +vM +rE+++ a++  + ++l +lk+e+e+ ++++e+++++af+++dl+aa+++++ l+Y+ ++k 
  KHJ33339.1 150 SDILSKVMNIRERIDAARSC-SIATLGKLKNEIEQNVKQSETQVAKAFDNDDLQAAKRQTIFLQYWMSVKS 219
                 689**************877.88*************************999***************99875 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   6.1e-10   3.7e-06      16      62 ..      81     129 ..      74     129 .. 0.87

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 6.1e-10
                 HHHHHHHHHHHHHSTTTS..CCHHHHHHHHHHHHHHHHHHTSHHHHHHH CS
        DnaJ  16 eIkkaYrklalkyHPDkn..pkdpeaeekFkeineAyevLsdpekRkqY 62 
                  +++++ kl  + HPD++  +++++a ++   ineA+ vL+ p +R+qY
  KHJ33339.1  81 ALRQEFLKLQAQAHPDRHanTSKESAGHESTLINEAFAVLKSPLSRAQY 129
                 57899***********884344559999********************9 PP

>> HU-CCDC81_bac_2  CCDC81-like prokaryotic HU domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.4   6.1e-06     0.037       3      55 ..     133     185 ..     132     188 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 6.1e-06
  HU-CCDC81_bac_2   3 LansiaeaegisyeeAlqkiekeveelkqeLeeegrveleniGeLslneegkl 55 
                      L +s +++e+i+   A + i + v +++++++   ++++  +G+L+   e+++
       KHJ33339.1 133 LRQSNIKEEEINRSIAESDILSKVMNIRERIDAARSCSIATLGKLKNEIEQNV 185
                      67888999****************************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       933  (0.0520386); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 1740.59
//
Query:       KHJ33340.1  [L=530]
Description: putative nonsense-mediated mrna decay protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-39  135.0   0.9    7.8e-39  133.5   0.0    2.2  2  Smg4_UPF3       Smg-4/UPF3 family
    2.3e-06   27.3   0.0    1.7e-05   24.6   0.0    2.3  2  RRM_1           RNA recognition motif. (a.k.a. RRM, RBD, or R
  ------ inclusion threshold ------
      0.092   12.8   0.0        0.2   11.7   0.0    1.6  1  Tecti-min-caps  Tectiviridae, minor capsid
       0.15   12.1   1.1       0.42   10.7   0.0    2.3  2  RRM_3           RNA binding motif


Domain annotation for each model (and alignments):
>> Smg4_UPF3  Smg-4/UPF3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.5   0.0   1.7e-42   7.8e-39       3     174 .]       7     173 ..       5     173 .. 0.91
   2 ?   -3.4   2.1       1.8   8.2e+03     124     154 ..     182     215 ..     178     238 .. 0.48

  Alignments for each domain:
  == domain 1  score: 133.5 bits;  conditional E-value: 1.7e-42
   Smg4_UPF3   3 ktKvviRrLPPnLteeefleavsd..kplpetvdykyFvpGklskdslkeskysrayinfkdpedlvqfakkfdghvFvDskgnes......paivefA 93 
                 + K++iRrLPP Lt eef +++++  + ++++vd+ +F pGk+skd++k+s+++ray++++d++  +++a+ +++ +F+D+k++ +      p+++e+A
  KHJ33340.1   7 RLKIIIRRLPPGLTREEFTSTLGPewDVGQGRVDWAAFKPGKISKDPSKPSRPTRAYLHLTDESYTITLAEIVRNSTFEDAKNTFYnqsligPPTIEYA 105
                 78*********************8899*******************************************************8888999********** PP

   Smg4_UPF3  94 pyqkvpkkkkkkkdakqgtIekDpeylaFleslekeeeekeseseeeklaeeaeekekekeakkekktttpLleylkekka 174
                 p+  +p+++  + d++ gtI++D+e++aFle l ++ +e+       + + +        ++k+ek t tpL++yl +kka
  KHJ33340.1 106 PFGYIPSDR-IRVDTRAGTIDQDSEFMAFLEGLVHPIKEQ--GP---EISTD--V-----NSKQEKITVTPLVQYLIDKKA 173
                 *******99.************************888772..22...22211..1.....45679***********99985 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.8
   Smg4_UPF3 124 eslekeeeekeseseeeklaeeaeekekek...e 154
                 +sl+k+e+++++ ++ + ++   +e ++++   +
  KHJ33340.1 182 KSLKKQEAHSSKGKNVKDANLGPDEIKNRRetkA 215
                 6666666664444433333333233222222221 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.29   1.3e+03       1      15 [.      10      24 ..      10      30 .. 0.85
   2 !   24.6   0.0   3.7e-09   1.7e-05       8      57 ..     432     476 ..     428     479 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.29
                EEEESETTTSSHHHH CS
       RRM_1  1 lfVgnLppdvteeeL 15
                ++++ Lpp +t+ee 
  KHJ33340.1 10 IIIRRLPPGLTREEF 24
                689*********986 PP

  == domain 2  score: 24.6 bits;  conditional E-value: 3.7e-09
                 TTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHH CS
       RRM_1   8 pdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAle 57 
                 + +te+ L++ ++ fG+++ ++  r      kgfa+V+F ++e  +kA++
  KHJ33340.1 432 QGITEHLLRQAMERFGEVTMVDFDR-----RKGFAYVNFLDSEGFKKAMA 476
                 679***************6666666.....7*****************97 PP

>> Tecti-min-caps  Tectiviridae, minor capsid
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   4.6e-05       0.2      19      60 ..     104     145 ..      92     166 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.6e-05
                     ----------------B------S----S--S----SS---- CS
  Tecti-min-caps  19 paptetmpllnyrvegriagiqqarqfmpflqgphravaeqt 60 
                      ap   +p    rv+ r   i+q  +fm fl+g    + eq 
      KHJ33340.1 104 YAPFGYIPSDRIRVDTRAGTIDQDSEFMAFLEGLVHPIKEQG 145
                     578888999999*********************999998885 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.7      0.83   3.7e+03      65      73 ..     209     217 ..     165     242 .. 0.51
   2 ?   10.7   0.0   9.4e-05      0.42      11      55 ..     432     476 ..     423     488 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.83
                 CTSSEEEEE CS
       RRM_3  65 kdaevtlel 73 
                 +  e ++e 
  KHJ33340.1 209 NRRETKAEK 217
                 222333333 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 9.4e-05
                 SS--HHHHHHHCHCCS-ECEEEE-TTSSEEEEEESSHHHHHHHHH CS
       RRM_3  11 kelsredikellsklgevayvdyekgdkegevrFkedeeakkale 55 
                 + ++ + ++++++++gev  vd+ + +  ++v F ++e  kka+ 
  KHJ33340.1 432 QGITEHLLRQAMERFGEVTMVDFDRRKGFAYVNFLDSEGFKKAMA 476
                 566778899****************************99999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1280  (0.0713927); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 3705.45
//
Query:       KHJ33341.1  [L=941]
Description: putative blumeria specific protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.84    9.2  11.8        3.5    7.2   0.2    4.1  4  CobU       Cobinamide kinase / cobinamide phosphate guanyltra


Domain annotation for each model (and alignments):
>> CobU  Cobinamide kinase / cobinamide phosphate guanyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.2    0.0002       3.5      61     127 ..     440     509 ..     430     517 .. 0.74
   2 ?   -1.4   0.3     0.086   1.5e+03      30      83 ..     580     635 ..     573     679 .. 0.55
   3 ?    6.7   0.5   0.00027       4.8      54     118 ..     713     775 ..     709     780 .. 0.73
   4 ?   -0.6   0.0     0.047   8.4e+02     133     159 ..     829     855 ..     790     858 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0002
        CobU  61 ldlaealkeeekkevvLvDcltlwltnllleeeaek......veekleeeveellealkelkatvvlVsnEvg 127
                 + l++ +++e++ +  ++D l+l ++n l + e+e        +e++++e++ell    + +++++ + nEv 
  KHJ33341.1 440 ETLEKEINSEPH-KKEIIDLLGLQIQNRLIALENEVvknqeiNSESVKKEITELLGL--QIQNRLIAIENEVA 509
                 567778877766.8899*************998776865554445555555555544..57789*******96 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.086
        CobU  30 ATaealDeemaeRiarHrerR..paeWetveepldlaealkeeekkevvLvDcltl 83 
                 AT ++ D+   eR+ + + r    ++++ + e +++ +a +++ ++ +  vD +t+
  KHJ33341.1 580 ATNQSYDDTKMERMVEVKTRKfvAETFRKISEVSQMLAATNHSVENLMSRVDNVTT 635
                 77777755555555554444444555555555444444443333344555666554 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.00027
        CobU  54 WetveepldlaealkeeekkevvLvDcltlwltnllleeeaekveekleeeveellealke.lkat 118
                 ++t ++ ++l++al++   ++  +++clt  l  l+ +++ ++ +++l++++++l+e++ e  +++
  KHJ33341.1 713 FKTNQNIKKLTTALED---ERKSIIECLTSKLDGLVSSDNLHTYKTQLDTQIQTLVEKCVEeYTKK 775
                 4555555566666644...45699**************99998999*******9998875414443 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 0.047
        CobU 133 enalgrlfrdllGrlnqrlaaeadevv 159
                  n+++++f+++ G l + +a++ d+ +
  KHJ33341.1 829 VNRVTNKFQEQNGGLSELIATHVDRSF 855
                 4789999************99999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (941 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2613  (0.145742); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.21u 0.28s 00:00:01.49 Elapsed: 00:00:00.50
# Mc/sec: 5682.66
//
Query:       KHJ33342.1  [L=566]
Description: putative serine arginine repetitive matrix protein 1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       844  (0.0470746); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 3808.13
//
Query:       KHJ33343.1  [L=1097]
Description: putative copper resistance-associated p-type atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.3e-48  164.1   0.4    4.6e-47  159.9   0.0    2.4  2  E1-E2_ATPase  E1-E2 ATPase
    1.5e-30  107.1   0.0    1.3e-29  104.0   0.0    2.1  2  Hydrolase     haloacid dehalogenase-like hydrolase
    9.5e-08   32.4   0.2    9.8e-07   29.1   0.1    2.8  4  HMA           Heavy-metal-associated domain
      0.001   18.8   1.7     0.0039   17.0   0.1    2.7  3  Hydrolase_3   haloacid dehalogenase-like hydrolase
     0.0039   17.6   0.0     0.0081   16.6   0.0    1.5  1  HAD           haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.038   1.4e+02     145     172 ..     329     359 ..     292     366 .. 0.77
   2 !  159.9   0.0   1.3e-50   4.6e-47      12     181 .]     515     699 ..     499     699 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.038
                   T...HHHHHHHHHHHHHS-TTHHHHHHHHHH CS
  E1-E2_ATPase 145 a...eallralallvaaiPcaLplavplala 172
                   +   ++l+ra+ +l +aiP  ++ ++ + ++
    KHJ33343.1 329 ReqfRILIRAIITLAIAIPTMIIGIIYMNFV 359
                   1444889999999999999999888777665 PP

  == domain 2  score: 159.9 bits;  conditional E-value: 1.3e-50
                   TTS-EEEEGGG--TTSEEEEETT-B--SEEEEEEE-SEEE-TTTS---S-EE-G-TTEE-TT-EEEE-EEEEEEEE-TTTSTTTTTSTTS------- CS
  E1-E2_ATPase  12 dgteeeidakelvpGDivllkagdrvpaDgrivegsaevdesaLTGEslpvekekgdmvfsGtvvvsgeakavVtatgedtelgkiarlveeakskk 108
                   d++  +i+++ l++GD+v++  g++ p Dg iv+g+++++es+LTGEs+ ++k+ gd+vfsGt+++  ++++++t t  +t+l++i++ v+e + k+
    KHJ33343.1 515 DNNPNDIPVDHLEIGDLVKVLCGESPPFDGFIVNGETSFNESSLTGESRVIKKKVGDKVFSGTINKFSPITVRITSTLGTTMLDEIIKIVREGQTKR 611
                   667778******************************************************************************************* PP

                   -HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTT...............HHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHT CS
  E1-E2_ATPase 109 tplqkkldklgkvlvpvvlliallvflialllgksla...............eallralallvaaiPcaLplavplalalgarrlakk 181
                   +p+++++d+l+k++vp+++lia+++++++l +  s                  +l +a+a++v+a+Pc+L+la+p+al +g + +ak+
    KHJ33343.1 612 APIERIADRLTKFFVPMICLIAIITWFFWLGIVMSKKlpaelldssiesrisWSLQFAIAVVVIACPCGLALAAPTALYVGSSIAAKN 699
                   *****************************9977776677899999999*99555566**************************99986 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.18   6.5e+02     150     195 ..     172     224 ..     143     228 .. 0.69
   2 !  104.0   0.0   3.7e-33   1.3e-29       3     210 .]     718     972 ..     716     972 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.18
                 HHHHH.TT......GGGESEEEEHHCES.STTTSHHHHHHHHHHHTSTGGGEEE CS
                 xxxxx.xx......xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 150 raanq.lG......ddyfdaviasdiet.vakpspegkvaaireLqgkpeevam 195
                 +a++q lG      +++++ + +s i++ + ++++++   ai+e++ k   +++
  KHJ33343.1 172 AAIEQkLGnkpwikKHIINPITNSVIVEfFDEAKKDQIINAIEEIGYKA-VIVA 224
                 677777888555533333333344444489**************96544.4444 PP

  == domain 2  score: 104.0 bits;  conditional E-value: 3.7e-33
                 EEEEESBTTTBCHH.HHHHHHHHHH...........CHHHHHHHHHHHHCHHHHHHHHHHHHH...HHHHHHHHHETTTE.............HHHHTH CS
                 xxxxxxxxxxxxxx.xxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxx.............xxxxxx RF
   Hydrolase   3 tvvfDkdGTLttge.psvedvivsa...........alalaaaletgsehpigkalvaaakar...sgaltgfatfigrg.............ayaigk 73 
                  +vfDk+GTLt g  p+v+    ++            l++  a+e+ s+h i+ka+ a++  +   +  ++ + ++ g+g             ++ +g+
  KHJ33343.1 718 HIVFDKTGTLTIGGdPEVTN---YRilsdgeserrlILSITNAIEIHSNHIIAKAILAFCARHnfeRMGTSCIVEISGKGmkgkvlmrsmgyqEVIVGN 813
                 69*********776455555...333335644444444445555555*********9999999776666699999***************9*99999** PP

                 HHHHHHH..HCHHHHHHHHHHHHHHCHHHHHH..................TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHH CS
                 xxxxxxx..xxxxxxxxxxxxxxxxxxxxxxx..................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  74 pewltal..dippdlgaaigsaqsqgrtvall..................qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetaeraa 152
                 + +l +   +i    ++ ig++  +g++ al                   + +++a+f i+dp  ++pea +++++L+++gi v++l+gdn+ t + + 
  KHJ33343.1 814 EALLYDYgvEIDASSQSLIGKWKLEGQSIALTatrtfykesmleqeykknNWKLVALFGISDP--IRPEAFDVIKALRERGIGVWMLSGDNQITTNVVG 910
                 9999999*************************************99999888***********..********************************** PP

                 HHTTGGGESEEEEHHCES...STTTSHHHHHHHHHHHT............STGGGEEEEESSHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 153 nqlGddyfdaviasdiet...vakpspegkvaaireLq............gkpeevamVGDgvnDaaalaaAg 210
                 +++G           i +   +a+++p +k ++i+ Lq             + + +amVGDg+nD++al aA+
  KHJ33343.1 911 SHIG-----------IRVeniIAGVLPGQKAEKIKFLQqslkssdislgrQNRSFIAMVGDGINDSPALTAAD 972
                 ****...........444469****************99******9998877999****************98 PP

>> HMA  Heavy-metal-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0         5   1.8e+04      12      23 ..      19      30 ..      17      30 .. 0.88
   2 !   29.1   0.1   2.7e-10   9.8e-07       2      62 .]     160     219 ..     159     219 .. 0.91
   3 ?   -1.8   0.0       1.2   4.4e+03      16      33 ..     258     275 ..     244     302 .. 0.72
   4 ?   -2.2   0.0       1.6   5.9e+03      35      49 ..     724     738 ..     719     751 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 5
         HMA 12 CaakvekvLsel 23
                C +k++ +L++l
  KHJ33343.1 19 CISKIQNTLAKL 30
                999999999986 PP

  == domain 2  score: 29.1 bits;  conditional E-value: 2.7e-10
         HMA   2 vrvsgmhCagCaakvekvLselpgVesvkvdlatktvtVeg.daestklrkiieaiekagyk 62 
                 ++vsgm+C++C a++e+ L + p +++  ++  t++v Ve+ d++++   +ii+aie++gyk
  KHJ33343.1 160 LAVSGMTCTACTAAIEQKLGNKPWIKKHIINPITNSVIVEFfDEAKK--DQIINAIEEIGYK 219
                 68***************************************544442..77**********7 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 1.2
         HMA  16 vekvLselpgVesvkvdl 33 
                 +  +Ls+++g++++k   
  KHJ33343.1 258 ILNSLSSFNGISEIKPTI 275
                 778999999999987654 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 1.6
         HMA  35 tktvtVegdaestkl 49 
                 t+t+t+ gd+e t++
  KHJ33343.1 724 TGTLTIGGDPEVTNY 738
                 69*********9876 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.48   1.7e+03      77     113 ..     199     235 ..     186     256 .. 0.71
   2 ?   -2.5   0.0      0.95   3.4e+03      17      43 ..     878     904 ..     875     923 .. 0.72
   3 !   17.0   0.1   1.1e-06    0.0039     203     250 ..     952     999 ..     927    1004 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.48
                  --B-HHHHHHHHHHHHHTTCEEEEEESSEEEESTT.T CS
  Hydrolase_3  77 stiskedvkeiikllkennveillytedkvyvlnkek 113
                  + +++++ ++ii++++e + +++++  d+v++l  e+
   KHJ33343.1 199 EFFDEAKKDQIINAIEEIGYKAVIVAVDHVTTLATEN 235
                  4567778888999999999888888888888887722 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.95
                  -HHHHHHHHHHHHTTSEEEEE-SS-HH CS
  Hydrolase_3  17 sektkeaikklkekgikvviATGRslr 43 
                   +++ ++ik l+e+gi v   +G +  
   KHJ33343.1 878 RPEAFDVIKALRERGIGVWMLSGDNQI 904
                  677788999999999988887776555 PP

  == domain 3  score: 17.0 bits;  conditional E-value: 1.1e-06
                  GGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEE--GGGTH CS
  Hydrolase_3 203 leeviafGDgeNDieMLeaaglgvAmgnaseevkkaAdyvtksnnedG 250
                  ++ ++ +GDg ND + L+aa++g+A+g++s+ +++ A  v  + + ++
   KHJ33343.1 952 RSFIAMVGDGINDSPALTAADVGIAIGSGSNIAISSAEIVLVTSDLHS 999
                  3457889*******************************9988777655 PP

>> HAD  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   2.3e-06    0.0081      86     187 ..     877     968 ..     853     969 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 2.3e-06
         HAD  86 ldpgalellaahraaGdrvvvvSgglrplvepllaelg..adevlatelevddrltgelglegkpvrgegkvaalrewlaaegegidleevvayGDsps 182
                 ++p+a ++++a r++G+ v+++Sg +++ +  +  + g  +++++a       +l g+    +k+ + ++ +++ +  l+++++      +  +GD+++
  KHJ33343.1 877 IRPEAFDVIKALRERGIGVWMLSGDNQITTNVVGSHIGirVENIIAG------VLPGQ--KAEKIKFLQQSLKSSDISLGRQNRSF----IAMVGDGIN 963
                 469********************************************......99999..66666666433333333334444333....7777***** PP

         HAD 183 Dlpll 187
                 D p+l
  KHJ33343.1 964 DSPAL 968
                 *9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1097 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       650  (0.0362541); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.78u 0.29s 00:00:01.07 Elapsed: 00:00:00.46
# Mc/sec: 7149.07
//
Query:       KHJ33344.1  [L=312]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.23   11.5   2.2       0.58   10.2   1.0    1.9  2  TcdB_toxin_midC  Insecticide toxin TcdB middle/C-terminal reg


Domain annotation for each model (and alignments):
>> TcdB_toxin_midC  Insecticide toxin TcdB middle/C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0     0.064   1.2e+03      80     124 ..      45      90 ..      36      97 .. 0.80
   2 ?   10.2   1.0   3.2e-05      0.58      89     133 ..     112     153 ..     104     166 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.064
  TcdB_toxin_midC  80 vDeYGeplksvsvaYpRrkkpeanPypdt.lpeelwessvdeqQtk 124
                       De+ +   ++   Y R+  ++++P  +  +p  + ++s++++Q  
       KHJ33344.1  45 KDEFSREEATAFQVYLRQVISKVAPHDSLpTPTPIPSKSFHKKQSE 90 
                      6788888888888899999889999777678888889999999975 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 3.2e-05
  TcdB_toxin_midC  89 svsvaYpRrk.kpeanPypdtlpeelwessvdeqQtklrltetess 133
                      s +++Yp    +p++n    ++ ++ w+ + ++ Q+k r+t++++ 
       KHJ33344.1 112 STAIHYPTHVtQPREN----STTQSSWATVTRNSQKKARVTKDNNT 153
                      6789999887444444....567899***************98764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       934  (0.0520944); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2345.04
//
Query:       KHJ33345.1  [L=318]
Description: hypothetical protein EV44_g6091 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-77  260.3   6.8      2e-77  259.9   6.8    1.1  1  HVSL      Uncharacterised conserved protein
  ------ inclusion threshold ------
      0.046   14.1   0.3       0.45   10.9   0.0    2.6  3  C1-set    Immunoglobulin C1-set domain


Domain annotation for each model (and alignments):
>> HVSL  Uncharacterised conserved protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  259.9   6.8   2.2e-81     2e-77       1     232 [.      45     310 ..      45     314 .. 0.94

  Alignments for each domain:
  == domain 1  score: 259.9 bits;  conditional E-value: 2.2e-81
        HVSL   1 PpLPssfhdlyastvrtsteddpslhqGrkRsiphveGnWpthvYlewkpseeekellsellkkleekleeevklhslltsdlgaplplHiSLSrplvl 99 
                 PpLP++fhdlyast+r st+ddpslh+Gr+R  phv GnWpth+Ylew+ps+ e+ell++l+  ++ek   ++++hsllts+l+aplplH+SLSrp+ +
  KHJ33345.1  45 PPLPAKFHDLYASTKRLSTKDDPSLHGGRVRISPHVVGNWPTHIYLEWHPSTIERELLHQLIMTIQEKD-CSFQVHSLLTSELKAPLPLHVSLSRPIQI 142
                 9******************************************************************99.9**************************** PP

        HVSL 100 rthqkdsfldslkkelkssakrrFevsfsglkwvsndektRsFlvlrvksp.endeLkklleavnkvleefglpply...................... 175
                 +t+qkds+ +sl+++++ s +++Fe+sf++l+wvsn+ek+R+Fl+lr +s  +ndeL++ll+++n++++++gl ply                      
  KHJ33345.1 143 TTKQKDSISTSLRQAIECSSVQPFEISFTKLEWVSNFEKSRWFLILRTSSRhGNDELQSLLQICNNIVQRHGLLPLYedpkyfrnvtsrleklshiqss 241
                 *****************88999*************************9887578********************************************* PP

        HVSL 176 ..................kdeaFHiSiawslgepseeekeellselekaledaekeeelkqleikveevkvkiGn 232
                                     + FH+Siawsl+ p    ++++ + +e++  ++e++e +++l+ k+e++k+kiGn
  KHJ33345.1 242 niatcsdenhklkstsnsTFNTFHVSIAWSLNPP----SQNIVECMENT--NEENFEIISKLKAKFEHIKLKIGN 310
                 ***************9998899**********98....55555555422..23458999***************9 PP

>> C1-set  Immunoglobulin C1-set domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0     5e-05      0.45      10      66 ..      68     124 ..      60     128 .. 0.84
   2 ?   -1.2   0.2      0.31   2.8e+03      53      79 ..     259     282 ..     237     288 .. 0.57
   3 ?   -0.8   0.1      0.22     2e+03      28      65 ..     264     298 ..     257     303 .. 0.54

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 5e-05
                 HTTTSEEEEEEEEEEEBSS-EEEEEEETTEEESTTEEEEEEEEETTSEEEEEEEEEE CS
      C1-set  10 elakkkntLtClvtgfyppdikvtWlkngqevtegvkttepskesdstyqllskLev 66 
                 +l++ ++ +  +v g  p +i ++W     e +  ++   +++e+d ++q++s L+ 
  KHJ33345.1  68 SLHGGRVRISPHVVGNWPTHIYLEWHPSTIERELLHQLIMTIQEKDCSFQVHSLLTS 124
                 4556777777899999*********99998888879999***************986 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.31
                 ETTSEEEEEEEEEEEHHHHHTTSEEEE CS
      C1-set  53 esdstyqllskLevtpsewesgdeytC 79 
                 ++ +t++++   +++p    s++ ++C
  KHJ33345.1 259 STFNTFHVSIAWSLNP---PSQNIVEC 282
                 3334444444444444...55555555 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.22
                 S-EEEEEEETTEEESTTEEEEEEEEETTSEEEEEEEEE CS
      C1-set  28 pdikvtWlkngqevtegvkttepskesdstyqllskLe 65 
                  ++++ W  n  +++  v+  e +  +++ + ++skL+
  KHJ33345.1 264 FHVSIAWSLNPPSQNI-VECMENT--NEENFEIISKLK 298
                 5677777666544442.2222222..245677777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       857  (0.0477997); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 2487.66
//
Query:       KHJ33346.1  [L=276]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       321  (0.017904); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2101.31
//
Query:       KHJ33347.1  [L=99]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.05   13.5   1.2      0.084   12.7   1.2    1.4  1  zf-CCHC_6  Zinc knuckle
      0.065   13.3   0.2      0.084   12.9   0.2    1.2  1  ArfGap     Putative GTPase activating protein for Arf


Domain annotation for each model (and alignments):
>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.2   9.4e-06     0.084       3      19 ..       5      20 ..       3      38 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 9.4e-06
   zf-CCHC_6  3 KCknCGAFGHtarSkrC 19
                KC+nCG   H+  S+rC
  KHJ33347.1  5 KCRNCGG-PHRSDSRRC 20
                9*****9.5******** PP

>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   9.4e-06     0.084      36      99 ..       6      68 ..       2      86 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 9.4e-06
                -HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG-TTCGHHH CS
      ArfGap 36 CieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekrskssskek 99
                C +C g Hrs  ++    r ++    ++e+l+  ++ g+++++++l ak+ +e+   +++s+++
  KHJ33347.1  6 CRNCGGPHRSD-SRRCLARPTRSGAPTKEQLKNYRQAGEREFQALLRAKVAEESAAAADNSNSN 68
                9*********8.667788999999**************************98888855555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1043  (0.0581739); expected 358.6 (0.02)
Passed bias filter:                      578  (0.0322383); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 805.87
//
Query:       KHJ33348.1  [L=433]
Description: hypothetical protein EV44_g2457 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      260  (0.0145016); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.37
# Mc/sec: 3494.55
//
Query:       KHJ33349.1  [L=156]
Description: putative duf1687 domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-26   91.6   0.0    7.6e-26   91.1   0.0    1.2  1  DUF1687   Protein of unknown function (DUF1687)


Domain annotation for each model (and alignments):
>> DUF1687  Protein of unknown function (DUF1687)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.1   0.0   4.3e-30   7.6e-26       1     125 [.       2     141 ..       2     144 .. 0.85

  Alignments for each domain:
  == domain 1  score: 91.1 bits;  conditional E-value: 4.3e-30
     DUF1687   1 FrtlqkspdvitlFhnakspaSnkllklLkkasakasekakedq.........ereefelevtekfPTlDQlktilsyvgkska.........ksvlks 81 
                 Fr++ k++dvitlFhna+sp+S ++++++kkas+ a+++++ ++         +r++f+le+tek+PT DQl+ il+y+++ +          ++ +++
  KHJ33349.1   2 FRFH-KTLDVITLFHNANSPESRAVYQIMKKASEYATANSSGNNtmrnsrgfeRRSQFKLEITEKMPTRDQLRCILDYIQRVPLfkanvidgrERYVEE 99 
                 8999.9*************************9999887777666899********************************98877764445555566666 PP

     DUF1687  82 afpelseilkkfkkdeeskkklkelvkedlFkrplvVDWdngki 125
                  +p    ++k  k++  ++  l+  ++ d+F+rp+vVDW +g++
  KHJ33349.1 100 VTPVIGAVVKGAKNE--FDAFLRMKANPDNFHRPMVVDWSRGRA 141
                 666777777776666..8888898999************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.21s 00:00:00.59 Elapsed: 00:00:00.35
# Mc/sec: 1319.25
//
Query:       KHJ33350.1  [L=457]
Description: putative transcription initiation factor tfiid subunit 6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.4e-26   90.8   0.0    1.6e-25   89.2   0.0    1.9  1  TAF6_C         TAF6 C-terminal HEAT repeat domain
    3.9e-20   71.8   0.1    8.1e-20   70.8   0.1    1.6  1  TAF            TATA box binding protein associated factor (TA
    0.00021   21.6   0.2     0.0004   20.7   0.2    1.5  1  Histone        Core histone H2A/H2B/H3/H4
  ------ inclusion threshold ------
      0.051   13.9   0.0       0.13   12.6   0.0    1.7  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a


Domain annotation for each model (and alignments):
>> TAF6_C  TAF6 C-terminal HEAT repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.2   0.0   3.7e-29   1.6e-25       1      90 []     279     371 ..     279     371 .. 0.94

  Alignments for each domain:
  == domain 1  score: 89.2 bits;  conditional E-value: 3.7e-29
      TAF6_C   1 vltcllakklgak..seledhwaLRdfAAslLakilkkysssyktLkprvtrtllkvlldpkkslgtlyGallglaal.Geeavrklvlpnlk 90 
                 vltcl+++++g +  + ++ +++LRd+AAsl+++i+kk+s+s+++L+ r++rt+ kv+ldp +++g lyGa+ g+a++ G++a+ +lvlpnlk
  KHJ33350.1 279 VLTCLVGRNVGGStmDGTKSQFQLRDMAASLIGQIAKKFSKSSTELRARLARTCVKVFLDPVRTPGELYGAINGIASVgGPSAIATLVLPNLK 371
                 79********77644677777*********************************************************88***********96 PP

>> TAF  TATA box binding protein associated factor (TAF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.8   0.1   1.8e-23   8.1e-20       3      66 .]       7      70 ..       5      70 .. 0.97

  Alignments for each domain:
  == domain 1  score: 70.8 bits;  conditional E-value: 1.8e-23
                ---HHHHHHHHHHTT---B-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SSB-HHHHHHHH- CS
         TAF  3 ilpkesvkviAeslGitnLsdeaaalLaedveyrlkeivqeaakfmrhskRqkLtvaDvdsALr 66
                +++ + ++++Aes+Gi+ L++ea ++L+++veyr+ +++ ea++fmr++kR++L ++D+ +ALr
  KHJ33350.1  7 VWNPDNIRDVAESVGISMLNEEAVRILTQEVEYRVGQVIVEAMRFMRQGKRTTLGTQDIAQALR 70
                688899*********************************************************9 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.2     9e-08    0.0004      72     130 ..      14      71 ..      12      72 .. 0.91

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 9e-08
                 HHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHHHH CS
     Histone  72 reivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlArrl 130
                 r++ + ++   ++  eav +l++ +E+   ++  eA++ +++ KR T+  +Di  A+r 
  KHJ33350.1  14 RDVAE-SVGISMLNEEAVRILTQEVEYRVGQVIVEAMRFMRQGKRTTLGTQDIAQALRV 71 
                 56665.677789999******************************************95 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.9e-05      0.13      17      65 .]      21      69 ..      13      69 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.9e-05
                   TXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF 17 darkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65
                   ++ +++++A  ++++ ve  + ++  eA + + + kr t+  ++i++A+
     KHJ33350.1 21 GISMLNEEAVRILTQEVEYRVGQVIVEAMRFMRQGKRTTLGTQDIAQAL 69
                   5667899****************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       533  (0.0297284); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3285.17
//
Query:       KHJ33351.1  [L=244]
Description: putative thymidylate kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-39  135.8   0.0    1.6e-39  135.5   0.0    1.1  1  Thymidylate_kin  Thymidylate kinase
  ------ inclusion threshold ------
      0.012   15.6   0.3       0.15   12.1   0.0    2.1  2  AAA_14           AAA domain
      0.047   13.1   0.0       0.11   11.9   0.0    1.6  1  Arf              ADP-ribosylation factor family
      0.056   13.3   0.0       0.83    9.5   0.0    2.1  1  dNK              Deoxynucleoside kinase
       0.12   12.6   0.0        5.9    7.2   0.0    2.2  2  AAA_22           AAA domain
       0.17   12.0   0.0       0.33   11.1   0.0    1.7  1  AAA_33           AAA domain


Domain annotation for each model (and alignments):
>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.5   0.0   5.3e-43   1.6e-39       1     185 []      26     210 ..      26     210 .. 0.91

  Alignments for each domain:
  == domain 1  score: 135.5 bits;  conditional E-value: 5.3e-43
                      EEESTTSSHHHHHHHHHHHHHHTTE..EEEESSSTTSHHHHHHHHHHHTCS---HHHHHHHHHHHHHHTTHHHHHHHHHTT-EEEEES-HHHHH CS
  Thymidylate_kin   1 iEGlDGaGKttqaellkerlkeegik.vvltrepggteiGekirelllkeeeleeqteallfaadriehleekikpalkqgktvivdRylfSsl 93 
                      iEGlD+aGKttq++ l ++l   g++   l+++++ ++iG +i+++l++ + +++++++llf+a+r ++ ++ ik++++ g+t+++dRy++S++
       KHJ33351.1  26 IEGLDRAGKTTQVKRLCDKLYLLGLNvKTLRFPDRASPIGLMINNYLQNLTHMDDHAIHLLFSANR-WERANWIKENINAGYTIVCDRYHLSGV 118
                      8*************************999*************************************.*************************** PP

                      HHHHTTTTTTCHHHHHHGGGTTS.E-SEEEEEESSHHHHHTSCCTTSSTTTSHHHHHHHHHHHHHHHHHHHH...TTSTEEEEETTS-HHHHHH CS
  Thymidylate_kin  94 aYqgakegvdldlvlslnedvll.kPdltflldvdpevalkRlakrdeldeeeeeqldflrkvrerylelak...ederiliidasksieevhe 183
                      aY+  k++  l   + l  d++l  Pd++++ld++pe a  R++++ e++    e+++f++++r+ +l l++   +d+ + iida +++  v++
       KHJ33351.1 119 AYSVGKNNPSLTKEWALASDIGLpCPDAIIFLDISPEDASVRAEFGTEKY----EKKEFQQQIRKIFLHLLDsisNDTLVRIIDAGQPVLTVES 208
                      *****9998999999999***99*************************55....5555555555555555544214777889********9999 PP

                      HH CS
  Thymidylate_kin 184 eI 185
                      +I
       KHJ33351.1 209 QI 210
                      88 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.9e-05      0.15       4      49 ..      23      63 ..      20      87 .. 0.72
   2 ?    1.5   0.1     0.093   2.8e+02      36      98 ..     161     223 ..     145     233 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4.9e-05
      AAA_14  4 ilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladp 49
                 +vi+G+ r+GKTt +k+l ++l+      l +n+++ r+ ++a p
  KHJ33351.1 23 FIVIEGLDRAGKTTQVKRLCDKLY-----LLGLNVKTLRFPDRASP 63
                689*****************9999.....66666666666555544 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.093
      AAA_14  36 inldderdkkladpekllelileklke..ekktylflDEiqevpewekalkslvdegknldvivt 98 
                  ++ +e+++k++ ++++ +++l +l +  +++ + ++D  q v ++e+ +   + ++  +d i++
  KHJ33351.1 161 AEFGTEKYEKKEFQQQIRKIFLHLLDSisNDTLVRIIDAGQPVLTVESQIFATISDT--VDSIIS 223
                 455555555555444666777776333445777789999998888877776666655..555555 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.7e-05      0.11      16      36 ..      23      43 ..      15      56 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.7e-05
                EEEEEESTTSSHHHHHHHHHH CS
         Arf 16 rilllGLDnaGKtTilkklkl 36
                 i++ GLD aGKtT +k+l +
  KHJ33351.1 23 FIVIEGLDRAGKTTQVKRLCD 43
                58999************9976 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00028      0.83       1     186 [.      24     205 ..      24     224 .. 0.55

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00028
                 EEEEESTTSSHHHHHHHHHCCSTCEEEE-HHHHCCSSSSHHHHHHHHSHHHHHHHHHHHHHHHHHHHH..HCHHSSS-EEEEES-HHHHHHTHHHHHHH CS
         dNK   1 ivveGnIgaGKstlvklLskklgvkvfeEpvdkwtnvqknlLekfYkdpsrwsfalqtyvllsrlkqq..lealatkqvvvleRsiysdryiFakalae 97 
                 iv+eG   aGK+t vk+L +kl    ++    ++ ++++  + ++ ++  +  ++++++++   + +   ++a   k++  + ++i  dry    ++++
  KHJ33351.1  24 IVIEGLDRAGKTTQVKRLCDKLYLLGLNVKTLRF-PDRASPIGLMINNYLQNLTHMDDHAIHLLFSANrwERANWIKENINAGYTIVCDRYHLSGVAYS 121
                 7899999999999999999998666666666666.6666666666666666666666555444443330023323344444555555555555555555 PP

                 TTSS-HHHHHHHHHHHHHHHHHCCH-SEEEEEE--HHHHHHHHHHCTTCCCTTS-HHHHHHHHHHHHHHHTSGGCS-.EEEEETSS.-TT CS
         dNK  98 kgtlseeelkiykelldnlleelakpdlliYLkasletclerikkRgreeekkieldYlekLhekyeewlkklnevp.vlvidveeldlv 186
                  g+ +++  k ++   d     l+ pd +i+L++s+e    r +   +++ek   +++ +++ + + + l+++++ + v +id+ +  l 
  KHJ33351.1 122 VGKNNPSLTKEWALASDIG---LPCPDAIIFLDISPEDASVRAEFGTEKYEK---KEFQQQIRKIFLHLLDSISNDTlVRIIDAGQPVLT 205
                 5554444444433333333...355899999999999888888777777765...34445555555555555444443445554444444 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0     0.002       5.9       5      29 ..      21      45 ..      18      86 .. 0.90
   2 ?    3.7   0.0     0.024        71      71     127 ..     170     234 ..     105     236 .. 0.67

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.002
      AAA_22  5 agilvvtGesGtGKTtllrrlleql 29
                  ++v+ G   +GKTt ++rl ++l
  KHJ33351.1 21 GAFIVIEGLDRAGKTTQVKRLCDKL 45
                5799****************98876 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.024
      AAA_22  71 erlsseellealeqalrarav.ielliiDEaqh.lr.seealeeLrsllnl.....srkgvqliL 127
                 +   ++++++ + + l++ +  + + iiD  q  l+ + +++ ++++ ++       +k+++++L
  KHJ33351.1 170 KKEFQQQIRKIFLHLLDSISNdTLVRIIDAGQPvLTvESQIFATISDTVDSiisglFKKQIKMVL 234
                 22223333344444444444488899999999966466999999999888777777777777766 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00011      0.33       2      76 ..      24     111 ..      23     181 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00011
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdtlrr..rlfg..........tdqqsktdytrvldrlyqil.nelarkalsagrnvild 76 
                 +++ Gl  +GK+t ++rl+ kl    l+  tlr+  r  +          +  + +   +++l++++++  ++ ++++  ag++++ d
  KHJ33351.1  24 IVIEGLDRAGKTTQVKRLCDKLYLLGLNVKTLRFpdRASPiglminnylqNLTHMDDHAIHLLFSANRWErANWIKENINAGYTIVCD 111
                 67899999***********999988888888554322222333333222222223333445555544432024555666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       622  (0.0346924); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1750.98
//
Query:       KHJ33352.1  [L=779]
Description: putative duf907 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     2e-168  560.5  32.8   2.8e-168  560.1  32.8    1.2  1  TRP             Transient receptor potential (TRP) ion channe
    8.8e-42  142.8   0.8    1.8e-41  141.8   0.8    1.5  1  TRP_N           ML-like domain
  ------ inclusion threshold ------
      0.011   16.2   0.1       0.02   15.3   0.1    1.4  1  E1_DerP2_DerF2  ML domain
        1.8    8.6   9.3       0.18   11.9   0.2    3.2  3  Ac76            Orf76 (Ac76)


Domain annotation for each model (and alignments):
>> TRP  Transient receptor potential (TRP) ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  560.1  32.8  6.2e-172  2.8e-168       1     426 []     171     613 ..     171     613 .. 0.95

  Alignments for each domain:
  == domain 1  score: 560.1 bits;  conditional E-value: 6.2e-172
         TRP   1 vkwvtaviaglallasnasavastlgnsnaaahvaasvlslflyfQsvafigmlsvnyPpvlaawtqnfaWsmglirvsfmqkiinwyvqstgGtatlv 99 
                 v+wvtaviaglal+a   sav+s+lg+sn+aahva+++lslf+yfQ++a+ig+++v++Pp++++wtqnf+W+mg+i+v+fmq+i++wy++stgG++t++
  KHJ33352.1 171 VGWVTAVIAGLALMA---SAVTSGLGHSNTAAHVASNALSLFGYFQAQAIIGLTAVHLPPIVQSWTQNFQWTMGIIHVKFMQSIATWYQKSTGGSPTSL 266
                 89*************...********************************************************************************* PP

         TRP 100 lsssstssvsv.kral......................krgeskslpesssklvrGikrvaekagiestnafmtgllffliliallvvlvllfKlllel 175
                 l+s +t+sv+v kr+l                      kr++ +s+p   s +vrGikrva++agiestn+f+tgl ff+i+i+l++++v+lf++ +el
  KHJ33352.1 267 LNSLTTTSVQVeKRSLstiskrsvdytlklyarafelsKRAD-SSVPG--SYVVRGIKRVAFRAGIESTNLFLTGLSFFCIFIVLTICCVVLFRAYCEL 362
                 ***********7355555555566888888877665533211.13333..33359******************************************** PP

         TRP 176 larkklikedrlkefrknwlgilkgallrlilifffqllvlclfeftqrdsaavvvlAvillalflgvllffafrvlitarkskrlhknpaylLysdkk 274
                  +++k++k+d++++fr+ w  +lkg+++r++li+++q+++lcl+eftq ds+a+v+lA+++++ ++g+l+++a++v+++a++s+++hknpay+Lysd+ 
  KHJ33352.1 363 AIKMKWMKSDKFQDFRNGWFVVLKGIMFRMVLIGYPQMTILCLWEFTQVDSPAEVILAIFFFFGMTGTLAWAAMKVIRIAKRSVEMHKNPAYILYSDPA 461
                 *************************************************************************************************** PP

         TRP 275 vlnkyGflyeqyrasrywffvpllvylfvkalfialaqgsGkvQvialliiEllylvlliwlrPyedkrtnvlniiisvvkvlnvilllaFseefglse 373
                  lnk+Gfly+q+ra++y+f++p+l y+++k++f+a++q+sG+vQ+iall+iE++ l+ ++++rP++dk+tn +n++i+vv++ln+i+ll+F++ f ++ 
  KHJ33352.1 462 ALNKWGFLYVQFRATAYYFILPTLTYILIKSVFVAFGQNSGTVQAIALLLIEAVILIGASVIRPWMDKSTNSFNVAIAVVNFLNTIFLLVFTDMFSQPG 560
                 *************************************************************************************************** PP

         TRP 374 ivktvvGvvlivinavlalvlliliivnaiiallsknpdrryrpakddresfl 426
                 iv++v+Gv+++++nav++lvllil+++ +++a++++npd ry+p+ ddr+sf+
  KHJ33352.1 561 IVTGVMGVIFFIYNAVFSLVLLILVLIATVYAIIRQNPDSRYQPMSDDRASFI 613
                 **************************************************996 PP

>> TRP_N  ML-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.8   0.8   3.9e-45   1.8e-41       2     139 .]      30     166 ..      29     166 .. 0.96

  Alignments for each domain:
  == domain 1  score: 141.8 bits;  conditional E-value: 3.9e-45
       TRP_N   2 vtssfenClensqftaskfdvtftpdnktvvfnvtgtssienkavtlelkveaygyevvnetvdpCdanvkglCPlgpgfkinasgvlkvseevvseip 100
                 +++s++ C++ns+ftas f+v ftp+nkt++f++ g+ssi+++ v + ++v aygy+vv++ +dpC++++ g+CP+++g +i++ ++++ +++++++ip
  KHJ33352.1  30 ESKSLNACQDNSSFTASLFNVIFTPKNKTITFDIVGVSSIQGN-VSFAIEVRAYGYTVVKRVLDPCEMGLPGMCPMSTG-QIDILSNIQLEDNTINQIP 126
                 789****************************************.***********************************.******************* PP

       TRP_N 101 siaYsipdldatvrvriystg.eateiaCvsatitngktv 139
                 +iaY +pdlda v+v i++t     ++aCv+a+++ng+tv
  KHJ33352.1 127 GIAYGVPDLDANVKVIINATAnPDVSLACVEANLSNGQTV 166
                 ***************9998444789*************97 PP

>> E1_DerP2_DerF2  ML domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   0.1   4.6e-06      0.02      29     132 ..      54     160 ..      32     162 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 4.6e-06
                     ECTSEEEEEEEEEECSSBBSSEEEEEEEEETTEEEEE-BSSEETCHHHHHHTTTT-SSSB-TCEEEEEEEEEE........S-CCCHSC.....E CS
  E1_DerP2_DerF2  29 krgqnltisadgstsdeissglkaevevkvggwikvpfelpetddaCkvlelgegleCPikageyvtytlslp........lpselpng.....k 110
                     ++++++t+++ g   + i  +++  +ev++ g  +v  +     d C+   +g +  CP++ g+  ++  +++        +p + + +     +
      KHJ33352.1  54 PKNKTITFDIVG--VSSIQGNVSFAIEVRAYG-YTVVKR---VLDPCE---MGLPGMCPMSTGQI-DILSNIQledntinqIPGIAYGVpdldaN 138
                     345555555555..55566677779*****99.777777...679***...69**********88.77777776677777755555555777999 PP

                     EEEEEEEEECTTEEEEEEEEEE CS
  E1_DerP2_DerF2 111 yrvelelldedgkeltCvkidv 132
                     ++v + ++ + + +l+Cv++++
      KHJ33352.1 139 VKVIINATANPDVSLACVEANL 160
                     999999999999******9986 PP

>> Ac76  Orf76 (Ac76)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.8      0.12   5.3e+02      23      40 ..     331     348 ..     324     360 .. 0.83
   2 ?   -2.0   0.2       0.8   3.6e+03      16      45 ..     526     556 ..     509     563 .. 0.62
   3 ?   11.9   0.2   3.9e-05      0.18      20      76 ..     576     626 ..     555     627 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.12
        Ac76  23 lsellltllllfvlFiil 40 
                 +++l+lt l +f +Fi+l
  KHJ33352.1 331 STNLFLTGLSFFCIFIVL 348
                 7899**********9985 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.8
        Ac76  16 ildkneklsellltll.llfvlFiillnvyy 45 
                  +dk +++ ++ + ++  l  +F+++   ++
  KHJ33352.1 526 WMDKSTNSFNVAIAVVnFLNTIFLLVFTDMF 556
                 4788877777766655256677777766555 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 3.9e-05
        Ac76  20 neklsellltllllfvlFiillnvyyikteStpadlytekakkikKkrdledafDai 76 
                        +  +ll++vl   +  ++  +++S  + +  + a  ik + +l   +Da+
  KHJ33352.1 576 V------FSLVLLILVLIATVYAIIRQNPDSRYQPMSDDRASFIKSQTQLTTELDAL 626
                 2......222233333333344455569***************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (779 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1086  (0.0605723); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.30s 00:00:00.95 Elapsed: 00:00:00.42
# Mc/sec: 5531.11
//
Query:       KHJ33353.1  [L=248]
Description: putative tpr repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.2e-23   80.0   1.3    2.1e-22   78.8   0.7    1.8  2  Sdh5      Flavinator of succinate dehydrogenase


Domain annotation for each model (and alignments):
>> Sdh5  Flavinator of succinate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   0.7   1.2e-26   2.1e-22       1      59 [.      66     123 ..      66     138 .. 0.91
   2 ?   -1.4   0.0      0.13   2.3e+03      58      73 .]     195     210 ..     193     210 .. 0.86

  Alignments for each domain:
  == domain 1  score: 78.8 bits;  conditional E-value: 1.2e-26
                 HHHHHHHH.--SSHHHHHTTTTHHHHHTTT--HHHHHHHHHHHTS--HHHHHHHHT-.- CS
        Sdh5   1 raRllyrsrrRGmlElDllLgrFaekhlatlseeeldaferLLdleDpdLldwltgrke 59 
                 raRlly+sr+RG+lE DllL++Fae+hl +++e +l++++ +Ld++D+d+++w+t+  +
  KHJ33353.1  66 RARLLYQSRKRGTLESDLLLSTFAEAHLRDMTELQLAQYDLFLDENDWDIYYWATQD-P 123
                 79*****************************************************98.4 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.13
                 .---S-HHHHHHHHHH CS
        Sdh5  58 keepedaelaallekl 73 
                 +++p +++++++l++l
  KHJ33353.1 195 RPVPMRWKNSEILAML 210
                 48999*******9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.50
# Mc/sec: 1481.12
//
Query:       KHJ33354.1  [L=279]
Description: hypothetical protein EV44_g2195 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1477  (0.0823805); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1995.41
//
Query:       KHJ33355.1  [L=423]
Description: putative developmental regulatory protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.23   12.2   6.8       0.84   10.4   6.5    2.0  1  BBP1_N    Spindle pole body component BBP1, Mps2-binding prot


Domain annotation for each model (and alignments):
>> BBP1_N  Spindle pole body component BBP1, Mps2-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   6.5   4.7e-05      0.84      33     118 ..     198     311 ..     185     336 .. 0.55

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 4.7e-05
      BBP1_N  33 TNyklk....kkeknkeksseesrsRsnSwsgldssfykkyd.LLedseeeeqd...........dskrkkklesLlspvelkpkevsne......... 106
                 TN++++     +e  ++ + +++  R +Swsg+  + + ky+ LL++ +++e++           d ++++ +++L+ + +        +         
  KHJ33355.1 198 TNFQYEiapaSSEIASSPEYTDQVFRPSSWSGQGLTSFSKYQyLLSP-MQKETNisqenthkksiDYSSNQYSSNLRFSSD--------Stidenqktk 287
                 7888876665555566667788999*******999888888835566.666666333333333332222222222221111........1111111112 PP

      BBP1_N 107 ............ankeptDTFank 118
                             ++ +    +++k
  KHJ33355.1 288 iptnskklrhysSVADISSAYQRK 311
                 233333333333344444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1298  (0.0723967); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3150.87
//
Query:       KHJ33356.1  [L=66]
Description: hypothetical protein EV44_g3689 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       267  (0.0148921); expected 358.6 (0.02)
Passed bias filter:                      191  (0.0106531); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.23s 00:00:00.55 Elapsed: 00:00:00.36
# Mc/sec: 550.50
//
Query:       KHJ33357.1  [L=161]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      259  (0.0144459); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.18s 00:00:00.54 Elapsed: 00:00:00.33
# Mc/sec: 1451.70
//
Query:       KHJ33358.1  [L=510]
Description: putative rab9 effector protein with kelch motifs protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-37  125.7  11.5    2.2e-06   27.1   0.2    6.3  6  Kelch_1   Kelch motif
      4e-37  125.6  11.3    2.4e-06   27.4   0.0    6.3  6  Kelch_5   Kelch motif
    1.5e-34  117.1  13.0    2.3e-08   34.0   0.1    6.4  6  Kelch_6   Kelch motif
    3.6e-34  116.4   5.4    4.8e-06   26.7   0.1    6.5  6  Kelch_3   Galactose oxidase, central domain
      1e-32  111.9  13.8    1.2e-05   25.2   0.1    6.4  6  Kelch_4   Galactose oxidase, central domain
    1.2e-32  110.6  13.6    1.8e-06   27.7   0.0    6.5  6  Kelch_2   Kelch motif


Domain annotation for each model (and alignments):
>> Kelch_1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.1   1.4e-05     0.041       5      30 ..     206     231 ..     204     235 .. 0.84
   2 !   25.8   0.0   1.9e-09   5.7e-06       5      41 ..     256     292 ..     252     293 .. 0.93
   3 !   24.1   0.0   6.4e-09   1.9e-05       2      35 ..     304     337 ..     303     350 .. 0.83
   4 !   27.1   0.2   7.5e-10   2.2e-06       1      42 [.     363     404 ..     363     404 .. 0.95
   5 !   22.0   0.0     3e-08   9.1e-05       1      36 [.     411     446 ..     411     451 .. 0.91
   6 !   15.9   0.0   2.4e-06    0.0072       1      29 [.     461     489 ..     461     492 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.4e-05
                 EEEEEETTEEEEEEEBCSSSBEEEEE CS
     Kelch_1   5 agavvvggkiYviGGsdggnalssve 30 
                 ++++ vg  iY++GG+d+ ++ +++ 
  KHJ33358.1 206 HTSTLVGSNIYIFGGCDSRCCFNDLT 231
                 77888999**********99999875 PP

  == domain 2  score: 25.8 bits;  conditional E-value: 1.9e-09
                 EEEEEETTEEEEEEEBCSSSBEEEEEEEETTTTEEEE CS
     Kelch_1   5 agavvvggkiYviGGsdggnalssvevyDpetntWre 41 
                  ++++vg k+ ++GG+dg+ + ++v+v+D+++  W++
  KHJ33358.1 256 MTCTAVGKKLVIFGGGDGPAYYNDVYVLDTVNFRWSK 292
                 689********************************85 PP

  == domain 3  score: 24.1 bits;  conditional E-value: 6.4e-09
                 BBSEEEEEETTEEEEEEEBCSSSBEEEEEEEETT CS
     Kelch_1   2 ragagavvvggkiYviGGsdggnalssvevyDpe 35 
                 r+ ++a+  +  iY++GG+dg++al++++++D+ 
  KHJ33358.1 304 RRAHTACLWRSGIYIFGGGDGSQALNDIWRLDVA 337
                 677888888889********************86 PP

  == domain 4  score: 27.1 bits;  conditional E-value: 7.5e-10
                 BBBSEEEEEETTEEEEEEEBCSSSBEEEEEEEETTTTEEEEE CS
     Kelch_1   1 aragagavvvggkiYviGGsdggnalssvevyDpetntWrel 42 
                 ar +++a  vg k+ + GGsdgg++  +v+++D+et+ ++++
  KHJ33358.1 363 ARGYHTANMVGSKLIIYGGSDGGECFQDVWIFDVETHVFTQV 404
                 6899*********************************99875 PP

  == domain 5  score: 22.0 bits;  conditional E-value: 3e-08
                 BBBSEEEEEETTEEEEEEEBCSSSBEEEEEEEETTT CS
     Kelch_1   1 aragagavvvggkiYviGGsdggnalssvevyDpet 36 
                 +r  ++++ vg +++viGG+dg  ++++v  ++++t
  KHJ33358.1 411 PRLSHTSTIVGSYLFVIGGHDGVDYSNDVLLLNLVT 446
                 6889*************************9999887 PP

  == domain 6  score: 15.9 bits;  conditional E-value: 2.4e-06
                 BBBSEEEEEETTEEEEEEEBCSSSBEEEE CS
     Kelch_1   1 aragagavvvggkiYviGGsdggnalssv 29 
                 +r ++++v ++ ++ viGG+dg +  s+v
  KHJ33358.1 461 PRGYHSSVLHDSRLIVIGGFDGREVFSDV 489
                 799*******************9999887 PP

>> Kelch_5  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0     9e-05      0.27       5      25 ..     203     223 ..     199     238 .. 0.80
   2 !   22.2   0.1   3.4e-08    0.0001       2      39 ..     250     285 ..     249     288 .. 0.92
   3 !   27.4   0.0   7.9e-10   2.4e-06       2      40 ..     301     337 ..     301     339 .. 0.95
   4 !   23.6   0.0   1.2e-08   3.6e-05       2      42 .]     361     399 ..     361     399 .. 0.94
   5 !   20.1   0.4   1.5e-07   0.00046       4      39 ..     411     444 ..     410     446 .. 0.95
   6 !   23.3   0.0   1.5e-08   4.6e-05       2      37 ..     459     492 ..     458     495 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 9e-05
     Kelch_5   5 RaghcavtvsekiYvyGGkvg 25 
                 ++ h +  v+++iY++GG ++
  KHJ33358.1 203 IRAHTSTLVGSNIYIFGGCDS 223
                 67899999**********775 PP

  == domain 2  score: 22.2 bits;  conditional E-value: 3.4e-08
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvgrdgsvsddvyvLdl 39 
                 P+p++     +v+ k+ ++GG +g    +++dvyvLd+
  KHJ33358.1 250 PTPLRAMTCTAVGKKLVIFGGGDG--PAYYNDVYVLDT 285
                 89999999999************6..**********97 PP

  == domain 3  score: 27.4 bits;  conditional E-value: 7.9e-10
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvgrdgsvsddvyvLdlp 40 
                 P+ R+ h a+ + + iY++GG +g  +++ +d+++Ld+ 
  KHJ33358.1 301 PSKRRAHTACLWRSGIYIFGGGDG--SQALNDIWRLDVA 337
                 899********************6..***********96 PP

  == domain 4  score: 23.6 bits;  conditional E-value: 1.2e-08
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvgrdgsvsddvyvLdlpsf 42 
                 P +R +h a +v++k+++yGG +g  g+ + dv+++d++++
  KHJ33358.1 361 PKARGYHTANMVGSKLIIYGGSDG--GECFQDVWIFDVETH 399
                 67899******************6..************985 PP

  == domain 5  score: 20.1 bits;  conditional E-value: 1.5e-07
     Kelch_5   4 pRaghcavtvsekiYvyGGkvgrdgsvsddvyvLdl 39 
                 pR +h + +v+++++v+GG +g   ++s+dv+ L+l
  KHJ33358.1 411 PRLSHTSTIVGSYLFVIGGHDG--VDYSNDVLLLNL 444
                 8********************6..*********997 PP

  == domain 6  score: 23.3 bits;  conditional E-value: 1.5e-08
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvgrdgsvsddvyvL 37 
                 P+pR +h++v +++ ++v+GG++g   +v++dv vL
  KHJ33358.1 459 PQPRGYHSSVLHDSRLIVIGGFDG--REVFSDVKVL 492
                 9**********************6..8888887666 PP

>> Kelch_6  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.1    0.0013       3.9       4      19 ..     205     220 ..     204     231 .. 0.92
   2 !   21.6   0.0   6.5e-08    0.0002       5      41 ..     256     291 ..     252     298 .. 0.92
   3 !   34.0   0.1   7.7e-12   2.3e-08       2      45 ..     304     349 ..     303     350 .. 0.92
   4 !   23.6   0.1   1.5e-08   4.4e-05       4      50 .]     366     412 ..     363     412 .. 0.89
   5 !   22.7   0.1   2.8e-08   8.5e-05       1      46 [.     411     458 ..     411     462 .. 0.87
   6 !   13.1   0.1     3e-05     0.089       2      32 ..     462     491 ..     461     494 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0013
     Kelch_6   4 ghslvsvggkiYifGG 19 
                 +h++++vg+ iYifGG
  KHJ33358.1 205 AHTSTLVGSNIYIFGG 220
                 6999***********9 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 6.5e-08
     Kelch_6   5 hslvsvggkiYifGGytdsspylnkvwvydpetksWe 41 
                  ++++vg k++ifGG ++   y+n+v+v+d  + +W+
  KHJ33358.1 256 MTCTAVGKKLVIFGGGDG-PAYYNDVYVLDTVNFRWS 291
                 57889*************.7****************8 PP

  == domain 3  score: 34.0 bits;  conditional E-value: 7.7e-12
     Kelch_6   2 raghslvsvggkiYifGGytdsspylnkvwvyd...petksWeqlpp 45 
                 r +h+++++ + iYifGG ++ s++ln++w++d   + t+sW+ ++p
  KHJ33358.1 304 RRAHTACLWRSGIYIFGGGDG-SQALNDIWRLDvadINTMSWKLISP 349
                 779******************.9**********77777******998 PP

  == domain 4  score: 23.6 bits;  conditional E-value: 1.5e-08
     Kelch_6   4 ghslvsvggkiYifGGytdsspylnkvwvydpetksWeq.lpplpvpr 50 
                 +h++  vg+k+ i+GG+++ ++ + +vw++d+et++++q ++p+ +pr
  KHJ33358.1 366 YHTANMVGSKLIIYGGSDG-GECFQDVWIFDVETHVFTQvITPISYPR 412
                 89999**************.9999**************9448877777 PP

  == domain 5  score: 22.7 bits;  conditional E-value: 2.8e-08
     Kelch_6   1 praghslvsvggkiYifGGytdsspylnkvwvydpetksWeq...lppl 46 
                 pr++h++++vg++++++GG ++   y+n+v+++++ t+ W++    +++
  KHJ33358.1 411 PRLSHTSTIVGSYLFVIGGHDG-VDYSNDVLLLNLVTMLWDKrriYGQP 458
                 699*******************.8****************975554555 PP

  == domain 6  score: 13.1 bits;  conditional E-value: 3e-05
     Kelch_6   2 raghslvsvggkiYifGGytdsspylnkvwv 32 
                 r +hs+v++++++ ++GG ++  + +++v v
  KHJ33358.1 462 RGYHSSVLHDSRLIVIGGFDG-REVFSDVKV 491
                 559****************99.677777765 PP

>> Kelch_3  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   0.00015      0.44       3      45 ..     214     257 ..     212     261 .. 0.81
   2 !   24.7   0.0   7.1e-09   2.1e-05       1      47 [.     262     310 ..     262     311 .. 0.89
   3 !   24.3   0.0   8.9e-09   2.7e-05       4      46 ..     316     369 ..     315     370 .. 0.80
   4 !   22.3   0.0   3.8e-08   0.00011       1      47 [.     373     418 ..     373     420 .. 0.94
   5 !   26.7   0.1   1.6e-09   4.8e-06       1      48 [.     421     469 ..     421     470 .. 0.94
   6 ?    4.1   0.0      0.02        60       2      26 ..     472     494 ..     471     503 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00015
     Kelch_3   3 rlyifGGlgddgqdrlndvyvydldtntWaei...aslppaRagha 45 
                  +yifGG++  ++ + nd+ v+d d+ ++ +    ++ p++ +  +
  KHJ33358.1 214 NIYIFGGCD--SRCCFNDLTVLDADAFYFSRPfvcGDGPTPLRAMT 257
                 59*******..************99888887777788888876555 PP

  == domain 2  score: 24.7 bits;  conditional E-value: 7.1e-09
     Kelch_3   1 gdrlyifGGlgddgqdrlndvyvydldtntWaei....aslppaRaghaat 47 
                 g +l+ifGG +  g  ++ndvyv+d+++  W +     ++ p+ R+ h+a+
  KHJ33358.1 262 GKKLVIFGGGD--GPAYYNDVYVLDTVNFRWSKPklggDRNPSKRRAHTAC 310
                 679********..99************88***88889555688******99 PP

  == domain 3  score: 24.3 bits;  conditional E-value: 8.9e-09
     Kelch_3   4 lyifGGlgddgqdrlndvyvydl...dtntWaei..........aslppaRaghaa 46 
                 +yifGG +  g ++lnd +++d+   +t +W+ i           s p aR +h+a
  KHJ33358.1 316 IYIFGGGD--GSQALNDIWRLDVadiNTMSWKLIsppcsglaidKSKPKARGYHTA 369
                 7*******..***********88877999***887555666665666778888886 PP

  == domain 4  score: 22.3 bits;  conditional E-value: 3.8e-08
     Kelch_3   1 gdrlyifGGlgddgqdrlndvyvydldtntWaeiaslpp.aRaghaat 47 
                 g +l i+GG +  g+++  dv+ +d++t+ ++++ ++ + +R +h++t
  KHJ33358.1 373 GSKLIIYGGSD--GGECFQDVWIFDVETHVFTQVITPISyPRLSHTST 418
                 5789*******..*********************999888******98 PP

  == domain 5  score: 26.7 bits;  conditional E-value: 1.6e-09
     Kelch_3   1 gdrlyifGGlgddgqdrlndvyvydldtntWa..ei.aslppaRaghaata 48 
                 g +l+++GG +  g d++ndv++++l+t  W+  +i +++p++R +h++++
  KHJ33358.1 421 GSYLFVIGGHD--GVDYSNDVLLLNLVTMLWDkrRIyGQPPQPRGYHSSVL 469
                 679********..*******************99889**********9875 PP

  == domain 6  score: 4.1 bits;  conditional E-value: 0.02
     Kelch_3   2 drlyifGGlgddgqdrlndvyvydl 26 
                  rl ++GG++  g+++ +dv v+ l
  KHJ33358.1 472 SRLIVIGGFD--GREVFSDVKVLEL 494
                 5899******..****999977766 PP

>> Kelch_4  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.3   4.1e-06     0.012       5      36 ..     206     235 ..     203     237 .. 0.91
   2 !   19.8   0.1   1.9e-07   0.00057       6      43 ..     257     292 ..     256     294 .. 0.92
   3 !   25.2   0.1   4.1e-09   1.2e-05       2      45 ..     304     348 ..     303     352 .. 0.80
   4 !   21.5   0.1   5.8e-08   0.00017       1      39 [.     363     399 ..     363     409 .. 0.88
   5 !   20.3   0.0   1.3e-07    0.0004       1      48 [.     411     459 ..     411     460 .. 0.90
   6 !   14.1   0.0   1.2e-05     0.034       1      31 [.     461     489 ..     461     495 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4.1e-06
     Kelch_4   5 hsatsipdgtiylfGGrgedgtllndlylldl 36 
                 h++t ++  +iy+fGG+ +   ++ndl +ld+
  KHJ33358.1 206 HTSTLVG-SNIYIFGGCDSR-CCFNDLTVLDA 235
                 9*****7.7**********9.7*******996 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 1.9e-07
     Kelch_4   6 satsipdgtiylfGGrgedgtllndlylldlstntWrr 43 
                 ++t+++  ++++fGG  ++ + +nd+y+ld+ + +W++
  KHJ33358.1 257 TCTAVG-KKLVIFGGGDGP-AYYNDVYVLDTVNFRWSK 292
                 899**6.79999*******.7**********9999975 PP

  == domain 3  score: 25.2 bits;  conditional E-value: 4.1e-09
     Kelch_4   2 RaghsatsipdgtiylfGGrgedgtllndlyll...dlstntWrrlg 45 
                 R+ h+a+ + +  iy+fGG  +  ++lnd+++l   d+ t +W+ ++
  KHJ33358.1 304 RRAHTACLW-RSGIYIFGGGDGS-QALNDIWRLdvaDINTMSWKLIS 348
                 777******.58**********8.9********44444555776665 PP

  == domain 4  score: 21.5 bits;  conditional E-value: 5.8e-08
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedgtllndlylldlstn 39 
                 +R++h+a  ++  +++++GG  + g+++ d++++d++t 
  KHJ33358.1 363 ARGYHTANMVG-SKLIIYGGSDG-GECFQDVWIFDVETH 399
                 7*********7.79999******.69**********995 PP

  == domain 5  score: 20.3 bits;  conditional E-value: 1.3e-07
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedgtllndlylldlstntW..rrl.gslP 48 
                 pR +h++t ++  +++++GG  +    +nd+ ll+l t  W  rr+ g++P
  KHJ33358.1 411 PRLSHTSTIVG-SYLFVIGGHDGV-DYSNDVLLLNLVTMLWdkRRIyGQPP 459
                 8*********7.7**********9.5***************6555599998 PP

  == domain 6  score: 14.1 bits;  conditional E-value: 1.2e-05
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedgtllndl 31 
                 pR++hs++   d +++++GG  +  ++++d+
  KHJ33358.1 461 PRGYHSSVLH-DSRLIVIGGFDGR-EVFSDV 489
                 9*********.589999***9997.788886 PP

>> Kelch_2  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1     5e-06     0.015       5      38 ..     206     236 ..     204     237 .. 0.93
   2 !   11.7   0.0   6.9e-05      0.21       3      44 ..     254     292 ..     252     297 .. 0.86
   3 !   17.6   0.1   9.1e-07    0.0027       2      48 ..     304     350 ..     303     351 .. 0.82
   4 !   27.7   0.0   5.9e-10   1.8e-06       1      45 [.     363     404 ..     363     407 .. 0.95
   5 !   22.7   0.1   2.2e-08   6.6e-05       1      44 [.     411     451 ..     411     452 .. 0.95
   6 !   20.2   0.1   1.4e-07   0.00043       1      35 [.     461     492 ..     461     495 .. 0.94

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 5e-06
     Kelch_2   5 hsssvpggkiyvvGGahtdnpnlsssdvhvldle 38 
                 h+s+ +g+ iy++GG    ++ + ++d+ vld +
  KHJ33358.1 206 HTSTLVGSNIYIFGGC---DSRCCFNDLTVLDAD 236
                 99**************...************975 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 6.9e-05
     Kelch_2   3 gghsssvpggkiyvvGGahtdnpnlsssdvhvldlekhvWee 44 
                   ++++ +g k++++GG    +++ + +dv+vld+   +W++
  KHJ33358.1 254 RAMTCTAVGKKLVIFGGG---DGPAYYNDVYVLDTVNFRWSK 292
                 567999************...*************98777776 PP

  == domain 3  score: 17.6 bits;  conditional E-value: 9.1e-07
     Kelch_2   2 rgghsssvpggkiyvvGGahtdnpnlsssdvhvld...lekhvWeevtpl 48 
                 r  h+++ +++ iy++GG    +++ + +d++ ld    ++ +W++ +p+
  KHJ33358.1 304 RRAHTACLWRSGIYIFGGG---DGSQALNDIWRLDvadINTMSWKLISPP 350
                 778****************...9999999999986222677888777765 PP

  == domain 4  score: 27.7 bits;  conditional E-value: 5.9e-10
     Kelch_2   1 rrgghsssvpggkiyvvGGahtdnpnlsssdvhvldlekhvWeev 45 
                 +rg h++ ++g+k++++GG+   ++++ + dv+++d e+hv++ v
  KHJ33358.1 363 ARGYHTANMVGSKLIIYGGS---DGGECFQDVWIFDVETHVFTQV 404
                 5999****************...*******************976 PP

  == domain 5  score: 22.7 bits;  conditional E-value: 2.2e-08
     Kelch_2   1 rrgghsssvpggkiyvvGGahtdnpnlsssdvhvldlekhvWee 44 
                 +r  h+s+ +g+ ++v+GG+   +++++s+dv  l+l +  W++
  KHJ33358.1 411 PRLSHTSTIVGSYLFVIGGH---DGVDYSNDVLLLNLVTMLWDK 451
                 6789****************...*******************96 PP

  == domain 6  score: 20.2 bits;  conditional E-value: 1.4e-07
     Kelch_2   1 rrgghsssvpggkiyvvGGahtdnpnlsssdvhvl 35 
                 +rg hss+  +++++v+GG+   ++ +++sdv vl
  KHJ33358.1 461 PRGYHSSVLHDSRLIVIGGF---DGREVFSDVKVL 492
                 79******************...*********887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       342  (0.0190752); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3979.92
//
Query:       KHJ33359.1  [L=247]
Description: putative mitochondrial hypoxia responsive domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-05   25.0   3.6    1.6e-05   25.0   3.6    2.0  2  HIG_1_N       Hypoxia induced protein conserved region
  ------ inclusion threshold ------
      0.015   15.5   0.6       0.68   10.2   0.0    2.3  2  Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
      0.038   13.4   0.0        0.5    9.7   0.0    2.0  2  Cas_Csy2      CRISPR-associated protein (Cas_Csy2)
       0.05   13.8   0.2      0.094   12.9   0.2    1.5  1  DUF4079       Protein of unknown function (DUF4079)


Domain annotation for each model (and alignments):
>> HIG_1_N  Hypoxia induced protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.43   1.9e+03      12      26 ..      27      41 ..      21      55 .. 0.69
   2 !   25.0   3.6   3.6e-09   1.6e-05       9      51 ..     126     163 ..     118     164 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.43
     HIG_1_N 12 tvgalvrglrsmkrg 26
                 +++ + g+++ +r+
  KHJ33359.1 27 GLAVGFVGVYAAQRR 41
                566777888888877 PP

  == domain 2  score: 25.0 bits;  conditional E-value: 3.6e-09
     HIG_1_N   9 ilatvgalvrglrsmkrgdsk...qsnrlmraRiaaQaftvlalva 51 
                   at+ a v  +        k   ++++l +aR++aQ++t+++l+a
  KHJ33359.1 126 SMATAFAIVNRS--------KyltRAQKLVQARVYAQGLTLAVLIA 163
                 344444444444........234479******************97 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00015      0.68      25      74 ..      60     109 ..      44     118 .. 0.90
   2 ?    3.1   0.5     0.023   1.1e+02      37      65 ..     218     246 ..     191     247 .] 0.67

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00015
                   CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTS-TCCCCC CS
  Seryl_tRNA_N  25 kadvdelleldekrrelqveleelqaerNelskeIgkakkkkedaeelia 74 
                   + ++ +++++d++ r+ ++  +  q+ r  +s eI+ + ++k   ++l++
    KHJ33359.1  60 SGTFSAIISADKASRSYEFNRNPYQRYRDLASLEIEHLEAQKPTLQRLKD 109
                   678999************************************98888876 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.023
                   HHHHHHHHHHHHHHHHHHHHHHCCCCCCT CS
  Seryl_tRNA_N  37 krrelqveleelqaerNelskeIgkakkk 65 
                   + r+++ +  + +++ N +sk+I ka ++
    KHJ33359.1 218 QERKIEERKLKDKNNENHVSKTIPKAPQS 246
                   33444444444466678899999998776 PP

>> Cas_Csy2  CRISPR-associated protein (Cas_Csy2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.029   1.3e+02      27      88 ..      31      92 ..      26      98 .. 0.86
   2 ?    9.7   0.0   0.00011       0.5     136     222 ..      98     184 ..      89     192 .. 0.68

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.029
    Cas_Csy2 27 aflGavhaLerklaeaeaelklkgvgvvchdvqlqtykgkefvrsfkltrnPlkkdgktaai 88
                +f+G+  a  r+ + ++  l++k++ v +  +     +++++ rs +  rnP ++  + a++
  KHJ33359.1 31 GFVGVYAAQRRFKTIRDLTLQMKAFLVTSSGTFSAIISADKASRSYEFNRNPYQRYRDLASL 92
                6999999999999999999********9998888888888899*********9988777765 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00011
    Cas_Csy2 136 kiekvklielee..deeekakelrrllrrllpgfalverrdllaeeleelqeeapead..aldalLdlaalnhtaekdeegekveWeakkk 222
                 +++k++l++l++   +++    ++ ++ ++  +fa+v+r++ l+++ + +q+ +  a+  +l++l+ +aa++++  k+    + +We+ k 
  KHJ33359.1  98 EAQKPTLQRLKDwgSKNRYYIVTASWIASMATAFAIVNRSKYLTRAQKLVQA-RVYAQglTLAVLIATAAFEVRDAKSG---EGRWETVKV 184
                 567778888877433333334578899999**************96666664.44444115666666666666555554...558887665 PP

>> DUF4079  Protein of unknown function (DUF4079)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   2.1e-05     0.094      20     112 ..      30     179 ..      11     183 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.1e-05
     DUF4079  20 vaylGwqtrqrrlqsk.......................................................aerkekip.....kkvrdeHvklgslll 58 
                 v+++G+ + qrr ++                                                        +     ++     ++ ++     +s++ 
  KHJ33359.1  30 VGFVGVYAAQRRFKTIrdltlqmkaflvtssgtfsaiisadkasrsyefnrnpyqryrdlasleiehleaqK---PTLQrlkdwGSKNRYYIVTASWIA 125
                 566666666666666666677777777777777777777777666666666666666666666666664331...222222221222222334567889 PP

     DUF4079  59 llvvlgaigglvllylrrgklfpssHlyaGlavvvLlalsaalvpeiqkgksta 112
                 ++++++ai+     + r++kl++   +  Gl+++vL+a +a+ v + ++g+ ++
  KHJ33359.1 126 SMATAFAIVNRSKYLTRAQKLVQARVYAQGLTLAVLIATAAFEVRDAKSGEGRW 179
                 999999999999999***************************999999988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       920  (0.0513135); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 1842.50
//
Query:       KHJ33360.1  [L=228]
Description: putative manganese superoxide dismutase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-34  117.2   0.2    8.2e-34  115.8   0.1    1.7  2  Sod_Fe_C  Iron/manganese superoxide dismutases, C-terminal do
    5.7e-31  106.8   1.9    9.8e-31  106.1   1.9    1.4  1  Sod_Fe_N  Iron/manganese superoxide dismutases, alpha-hairpin


Domain annotation for each model (and alignments):
>> Sod_Fe_C  Iron/manganese superoxide dismutases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.34     3e+03      77      90 ..      58      71 ..      51      89 .. 0.73
   2 !  115.8   0.1   9.2e-38   8.2e-34       1     102 []     125     226 ..     125     226 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.34
                HHHTT-HHHHHHHH CS
    Sod_Fe_C 77 ldyqnkradYieaf 90
                ++++n+ + Y++++
  KHJ33360.1 58 IHHKNHHQTYVNNL 71
                55677777777664 PP

  == domain 2  score: 115.8 bits;  conditional E-value: 9.2e-38
                 --HHHHHHHHHHHSSHHHHHHHHHHHHHHSSSSEEEEEEEETT.TEEEEEEEETTTBGGGGTTCEEEEEE-SGGGTHHHHTT-HHHHHHHHGGGBBHHH CS
    Sod_Fe_C   1 psgelaeaieedfgslekfkkefkaaalavfgsGwawLvldkk.kkLeivttknqdnplvkeakplLalDvwehAYyldyqnkradYieafwnvvnWke 98 
                 p g+l+ aie++f+s+ +fk+++++a ++++gsGw+wL ++++ ++L+i t +nqd p+  + +plL++D wehAYyl+yqn++ +Y++++w+v+nWk+
  KHJ33360.1 125 PAGKLKLAIEQTFKSFPDFKTSLNSALAGIQGSGWGWLLQNRQtGQLSISTYPNQD-PVEPTFVPLLGIDAWEHAYYLQYQNRKVEYFSRIWDVINWKK 222
                 789*************************************99867***********.6888899*********************************** PP

                 HHHH CS
    Sod_Fe_C  99 veer 102
                 veer
  KHJ33360.1 223 VEER 226
                 *987 PP

>> Sod_Fe_N  Iron/manganese superoxide dismutases, alpha-hairpin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.1   1.9   1.1e-34   9.8e-31       3      81 ..      36     114 ..      34     115 .. 0.98

  Alignments for each domain:
  == domain 1  score: 106.1 bits;  conditional E-value: 1.1e-34
                 -----SS-TTTTTTTS-HHHHHHHHHTHHHHHHHHHHHHHHCHHHHCHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTB CS
    Sod_Fe_N   3 eLpeLpYaydaLePhisketlelHhdkHhktYvnnlNkalekleeakkkleelvlkklekalrnnagghvnHslfwknl 81 
                 +Lp+LpY+y+aLeP is +++e+Hh+ Hh+tYvnnlN   e+le+a +k++  ++++l + +++n+ggh+nHslfw++l
  KHJ33360.1  36 TLPDLPYDYAALEPSISGHIMEIHHKNHHQTYVNNLNIFTEQLETAIAKQDVSKQTNLLSSIKFNGGGHMNHSLFWESL 114
                 8****************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 1845.65
//
Query:       KHJ33361.1  [L=185]
Description: putative dna replication complex gins protein psf3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-21   76.0   0.0    4.2e-21   75.4   0.0    1.2  1  Sld5      GINS complex protein


Domain annotation for each model (and alignments):
>> Sld5  GINS complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.4   0.0   2.4e-25   4.2e-21       2     109 .]      45     162 ..      44     162 .. 0.99

  Alignments for each domain:
  == domain 1  score: 75.4 bits;  conditional E-value: 2.4e-25
                 EEEHHHHHHHH......HTTSCCCHHCHHHCHHHHHHCCCHHTTSSSSTTTTTTHHHHHHHHHHHHT.HCHHHHHHHHHHHHHHHHHHHTHCHHHHHH. CS
        Sld5   2 eLPlWlaelLk......rqrrveieppewlspesleailedetkssdlpslpphflelavkllelardldelkrllrdllevRlakirkfaenledaa. 93 
                 eLPlWlae+L+       ++ v++++p  l p++++a+++d+t++ dl++l p+f+ l+ ++lel+++ +e+ ++l + + +R+ +i+++a++ ++++ 
  KHJ33361.1  45 ELPLWLAEILAvsstssAKSLVTLDLPSSLAPRVINALKADPTSV-DLHALAPNFYGLGARILELFEE-EEICNVLIQAWQTRAIEINDHARYAAANQr 141
                 8********************************************.*********************9.****************************** PP

                 .....HTS-TCCHCCS-HHHH CS
        Sld5  94 .....gggggellsglseeEk 109
                      g +g e+l+gl+e Ek
  KHJ33361.1 142 ngigfGDEGLEFLRGLDEAEK 162
                 *******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       343  (0.019131); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1481.59
//
Query:       KHJ33362.1  [L=181]
Description: putative nuclear cap binding protein subunit 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.8e-16   57.5   0.0    1.4e-15   56.9   0.0    1.3  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.9   0.0   7.6e-20   1.4e-15       1      69 [.      55     124 ..      55     125 .. 0.97

  Alignments for each domain:
  == domain 1  score: 56.9 bits;  conditional E-value: 7.6e-20
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 l+VgnL++++tee+++elFsk+G+ik++ +  d  ++++ gf+fVe+ ++ dA ++++   g+kl+ r +
  KHJ33362.1  55 LYVGNLSFYTTEEQIHELFSKCGEIKRLIMGLDrFNKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERII 124
                 8*********************************************************9999**999977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1321.85
//
Query:       KHJ33363.1  [L=884]
Description: putative nuclear pore complex protein an-nup82 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.13   12.2   0.0          2    8.3   0.0    2.3  2  NT5C      5' nucleotidase, deoxy (Pyrimidine), cytosolic type


Domain annotation for each model (and alignments):
>> NT5C  5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0   0.00011         2      59     107 ..      27      75 ..       5      84 .. 0.85
   2 ?    1.0   0.0     0.019   3.4e+02       4      34 ..     446     476 ..     443     493 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00011
        NT5C  59 epglFadlepipgarevLeeladegrlvvitaallqfydavkekveWld 107
                     F+ + +++g+  +++++++ +  + ++++    + av++++ W d
  KHJ33363.1  27 IDSQFSYMTALNGSNSSIKRITKPSARRCLAHRGTEIFVAVGKEIRWAD 75 
                 55679*******************************999********87 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.019
        NT5C   4 vlvDlDgvladlygkmlevankrfeatllpe 34 
                 + +DlDgv a+ + k + ++ k+  +++ p 
  KHJ33363.1 446 ICLDLDGVEAQWLSKSRTRIWKQMTQAEIPS 476
                 789************9999999888877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (884 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.23s 00:00:00.85 Elapsed: 00:00:00.37
# Mc/sec: 7083.53
//
Query:       KHJ33364.1  [L=310]
Description: putative 60s acidic ribosomal protein p0 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-23   80.7   0.1    1.1e-22   79.8   0.1    1.5  1  RL10P_insert   Insertion domain in 60S ribosomal protein L10P
    7.1e-23   80.6   0.0    2.1e-22   79.1   0.0    1.7  2  Ribosomal_L10  Ribosomal protein L10
    9.2e-18   64.6   2.3    9.2e-18   64.6   2.3    1.9  2  Ribosomal_60s  60s Acidic ribosomal protein


Domain annotation for each model (and alignments):
>> RL10P_insert  Insertion domain in 60S ribosomal protein L10P
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.1   1.8e-26   1.1e-22       1      71 []     110     179 ..     110     179 .. 0.99

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 1.8e-26
  RL10P_insert   1 AraGtiAtedviipagplelaPgsiepeLrklglptklkkGkivleedylvckkGetltseqaqlLklLgi 71 
                   AraG+iA++dv++pag+++++Pg++ +++++lg+ptk+ +G+i++++d +++++G+++++++a+lL++L+i
    KHJ33364.1 110 ARAGAIAPDDVFVPAGNTGMEPGKT-SFFQALGVPTKIARGTIEITTDLKLVEAGNKVGASEATLLNMLKI 179
                   9************************.*******************************************98 PP

>> Ribosomal_L10  Ribosomal protein L10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.1   0.0   3.5e-26   2.1e-22       3      96 ..       6     102 ..       4     105 .. 0.92
   2 ?   -2.4   0.0      0.87   5.2e+03      56      84 ..     246     277 ..     242     286 .. 0.66

  Alignments for each domain:
  == domain 1  score: 79.1 bits;  conditional E-value: 3.5e-26
                    CCCHCCCCCCCCCCCTTSSEEEEEE-TTS-HHHHHHCCCHHHHHGCEEEEESCCCCCCCCHCCTSS..S...SCGCCSSSEEEEEESS-TCHHHHC CS
  Ribosomal_L10   3 kekKeelvkelkellkkyksvvvvdyegltvaqlqelRkklrengaelkvvKntlmrrAleetgeee.k...lkellkgpvalvftnedpvalakv 94 
                     e+K++++++lk ll++yks+++v +++++++q++e+R++lr++ + + ++Knt++rrA+++   ++ +   l +++kg+v++vftn d + + ++
     KHJ33364.1   6 SENKANYFDKLKGLLEEYKSIFIVGVDNVSSQQMHEIRQSLRGD-GVVLMGKNTMVRRAIKGFIPDApEyerLLPFVKGNVGFVFTNCDLNTIRDK 100
                    689****************************************9.*****************888863477899***************9999887 PP

                    CC CS
  Ribosomal_L10  95 le 96 
                    + 
     KHJ33364.1 101 IL 102
                    75 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.87
                    CCCCCCCHCCTSS.S...SCGCCSSSEEEEEE CS
  Ribosomal_L10  56 tlmrrAleetgeeek...lkellkgpvalvft 84 
                    ++++ A+e+   + +   lk+ +++p a++ +
     KHJ33364.1 246 KVLSVAIETDYSWPEieeLKDRIANPDAYAAS 277
                    56666776655543234588888887777665 PP

>> Ribosomal_60s  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.87   5.2e+03      50      58 ..     106     114 ..      90     119 .. 0.52
   2 !   64.6   2.3   1.5e-21   9.2e-18       2      88 .]     231     309 ..     230     309 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.87
                    XXXXXXXXX CS
  Ribosomal_60s  50 aaaaaaaaa 58 
                    +aa+a a+a
     KHJ33364.1 106 VAAPARAGA 114
                    233333322 PP

  == domain 2  score: 64.6 bits;  conditional E-value: 1.5e-21
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XX--SS--STTT CS
  Ribosomal_60s   2 ptaenikkvlkaagveveaarvkllvkalegkdieellangaaklaaaaaaaaaaaaaaaaaaaaeekkkeeeeeEeedddmGfgLF 88 
                    pt  ++ +++ +++++v+++++++++++ e +++++ +an+ a+     aa+a+ ++++  a+++ e+k+ee+e Ee+d+dmGfgLF
     KHJ33364.1 231 PTLPSVIHSIVNSYKKVLSVAIETDYSWPEIEELKDRIANPDAY-----AASAPVVEEK--AEEKVEEKEEEKE-EESDEDMGFGLF 309
                    89999************************************977.....4455555433..3334444444444.59********** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1038  (0.057895); expected 358.6 (0.02)
Passed bias filter:                      775  (0.0432261); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2279.91
//
Query:       KHJ33365.1  [L=943]
Description: putative related to rna-splicing regulatory protein phosphatase cyt- mitochondrial [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.1e-50  170.2   0.0    1.2e-49  169.5   0.0    1.3  1  RNB       RNB domain


Domain annotation for each model (and alignments):
>> RNB  RNB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.5   0.0   6.4e-54   1.2e-49       1     325 [.     433     792 ..     433     793 .. 0.85

  Alignments for each domain:
  == domain 1  score: 169.5 bits;  conditional E-value: 6.4e-54
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB   1 RkdlrdllvitIdpedakdlDdAisieklp.ngnyelgVhIADvshyvkegspldkearkratsvyLpekvvpMLPqelsedlcSLnpgedrlalsvli 98 
                 R dl+d  +++Id++da +lDd++s+e ++  +++++++h+AD+++ ++++ +  k+a++r+++v Lp+  vpML +++ ++ +SL +g+ +l++s+ +
  KHJ33365.1 433 RIDLKDINTFCIDDADALELDDGLSLEATDsLDEFWVHIHVADPTSILDPHGKESKYAQTRGNTVFLPGCKVPMLDHDIVMNHMSLAEGKLCLTISAKL 531
                 89*************************9995449*****************************************************999888888877 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........................xxxxxxxxxxxxxxxxxxxxxxxxxxx.. RF
         RNB  99 dvdekgevlsveiylsvIkskarltydevqdlleqkdekeekk...........................taedLellyelakalrkkRlkkgalef.. 168
                 + +  ge+l+ +i++ +  ++  +t++ ++++ ++ d+k+                              ++++L+ l++l +a     +kkga+    
  KHJ33365.1 532 NYK--GELLDSKINPRILGKVICITPKTFAEVNNNSDRKT--PisfsvgpriiaqipsrilagkdqlsekQQSELQILNKLGEARTLLLQKKGATFSli 626
                 777..****************************8888765..24579***********************99************999999997765567 PP

                 xxxxxxxxxxxxxx.........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx RF
         RNB 169 dspeikllldedkg.........................nrielkveeetkahslveelmllANelvArflseleipailrih.eepsnekledlikla 241
                 +  + k+ + ++++                          +i  ++  +++  + ++ +m lA +++A+++ +++ip+++ri  ++ s++kl+++++l 
  KHJ33365.1 627 EHDSLKIYFMNSNHqvisnncffpktdptievrlprsyqDSIIGHPVTKNSCGTAMSAFMQLAGQIAADWCRKRNIPIPYRIAlSQVSSQKLAEFHHLK 725
                 45556666655555567777777776677777777554444446666777799999**************************82455566666666666 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 242 kklglklednsskknlqeslekleeee.aeqllselllrllkeakyssepvgHfgLaleeYthfTSPirRYpDlvvhrllkalla 325
                                    l  le+ee + ++l   +l l+   ++s ep++H +La+e Y+++TSP+rR+ D+vvh++++a+++
  KHJ33365.1 726 I------------------LPFLEKEEiVPNSLISEYLALIGPVHLSAEPAPHPALAMEAYAKVTSPLRRFLDMVVHWQINAAIK 792
                 6..................555555555556666677889*****************************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (943 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 6449.52
//
Query:       KHJ33366.1  [L=604]
Description: putative glycosyltransferase family 22 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-39  136.9  24.4    1.6e-39  136.4  24.4    1.2  1  Glyco_transf_22  Alg9-like mannosyltransferase family


Domain annotation for each model (and alignments):
>> Glyco_transf_22  Alg9-like mannosyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.4  24.4   8.8e-44   1.6e-39      43     403 ..      56     415 ..      10     421 .. 0.78

  Alignments for each domain:
  == domain 1  score: 136.4 bits;  conditional E-value: 8.8e-44
  Glyco_transf_22  43 ltWEyspkygi..RSylfllllalpyrllaelvadskiavlyapRlllallsalidyylfravcrkygseiakialllslsswglfvfstrtfs 134
                      +++++ +  g   RS +  l+la + +++a++++ + +   +++R  ++ll+al+ ++   a++r yg+   ++++ll+ s+++++++ +rt++
       KHJ33366.1  56 QNYDHFSFPGAvpRSFVGSLALATVSKPFALMTGANGYETQLIVRGSMGLLNALSILRYKHALARAYGQDAGRWFVLLLASQFHVVYYASRTLP 149
                      66666666655236777789999999******************************************************************** PP

  Glyco_transf_22 135 nslemlltsialyllsellsrenksssnekylvavlliavlavliRptsallwlplvlflllrlvkkrsktflfliialvllvlllvlvlvili 228
                      n ++  lt++al  ++   ++  +    +++   ++l++++++++R + a+l++  +l++l  l  +     l+++i ++l+++++ l+++ +i
       KHJ33366.1 150 NMFAFFLTTLALRDFLP--LQAWNAP--KRHKRGIFLMVFATIVFRSEIAILLFAQLLYML--LHPR-M--SLEVMIPVCLRSASFSLLITFVI 234
                      ***************96..3444444..47999****************************..3333.2..25689****************** PP

  Glyco_transf_22 229 DslfYgkfvftplnflkyNvlsnlsslyGvhPwyfYllqnlpnilgvlllavllgllvllsrkvsr.lllllltilltLlvysllpHKElRFll 321
                      D++f+++ ++++l  + +Nv++ +ss +G  P+y+Y++  lp +l+  ++ +ll ++ l++  + r l  ++ + +l +++ys++pHKElRF++
       KHJ33366.1 235 DTYFWQRPIWPELCGFYFNVIQGKSSDWGISPFYYYFSYLLPKLLLNPFISILLIPYGLKKSVIRRrLREIITPSILYVIFYSFQPHKELRFII 328
                      *******************************************99999999999999997777888899************************* PP

  Glyco_transf_22 322 pvl.Plillsaavlltrlsresakvskklsllvllllfnvvlalllgl.......vhqagvillvevmseleetkrknrkekketssvyv 403
                      +v+ P+    + v+   ++++s+   ++  l  + l+++v+ + ++++       ++  g + ++ +++++ +++  n  e ++ ++++v
       KHJ33366.1 329 YVAvPFTASASIVAAYIWNHRSKSFFYR--LASVTLVASVLCSSFFSTwmlfissLNYPGGH-AISQLNHILKEASLNFSESQISTHIDV 415
                      **97876655444444554222222222..33333344444333333300000002222222.347777777777777777777777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (604 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 4189.22
//
Query:       KHJ33367.1  [L=523]
Description: putative trna methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.054   14.4   0.1        2.6    9.0   0.0    3.3  3  WD40      WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.52   9.3e+03      25      36 ..     129     140 ..     109     140 .. 0.63
   2 ?    1.2   0.0     0.045   8.1e+02       9      36 ..     260     290 ..     248     290 .. 0.64
   3 ?    9.0   0.0   0.00015       2.6       9      38 .]     306     337 ..     295     337 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.52
                 EEEEETTSEEEE CS
        WD40  25 lasGsdDgtvri 36 
                 ++   +D+++r+
  KHJ33367.1 129 IIVTREDKSIRV 140
                 333456888886 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.045
                 SS.SSEEEEE..EETTSSEEEEEETTSEEEE CS
        WD40   9 GH.ssvtsla..fspdgawlasGsdDgtvri 36 
                 GH s  t+++      +++l+++++D ++r+
  KHJ33367.1 260 GHvSMLTDVKlaKVGGKSYLITSDRDEHIRV 290
                 7733356663333334455899999999997 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00015
                 SS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgaw.lasGsdDgtvriWd 38 
                 GH  +v+ l+ +  ++  l+sG+ D+ + +Wd
  KHJ33367.1 306 GHtEFVSRLCIPETKPKiLISGGGDNELFVWD 337
                 997779999977777773569977*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1030  (0.0574488); expected 358.6 (0.02)
Passed bias filter:                      597  (0.033298); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 3725.71
//
Query:       KHJ33368.1  [L=762]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.015   16.1   0.9      0.015   16.1   0.9    4.5  5  WD40      WD domain, G-beta repeat
       0.13   11.2   0.2        0.7    8.8   0.0    2.0  2  Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping prot


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       1.7   1.5e+04      11      29 ..     195     205 ..     187     208 .. 0.70
   2 ?   -1.0   0.3      0.45     4e+03       3      14 ..     407     421 ..     405     462 .. 0.70
   3 ?    0.7   0.0      0.13   1.1e+03       2      35 ..     513     547 ..     512     550 .. 0.60
   4 ?   16.1   0.9   1.7e-06     0.015       2      38 .]     565     602 ..     564     602 .. 0.84
   5 ?   -1.6   0.1      0.69   6.2e+03      12      28 ..     669     685 ..     663     690 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.7
                 SSEEEEEEETTSSEEEEEE CS
        WD40  11 ssvtslafspdgawlasGs 29 
                 +++ts+        ++s+s
  KHJ33368.1 195 NPITSI--------ISSSS 205
                 579999........76654 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.45
                 EEEEEESSSS...EE CS
        WD40   3 clrtltGHss...vt 14 
                 +++++t H+    vt
  KHJ33368.1 407 KIHHYTPHNAektVT 421
                 688888884345565 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.13
                 EEEEEEESSSS..EEEEEEETTSSEEE..EE.ETTSEEE CS
        WD40   2 qclrtltGHss..vtslafspdgawla..sG.sdDgtvr 35 
                 +clr l++H++  ++ +af     + +  s+ s D+ +r
  KHJ33368.1 513 SCLRLLDAHNNklISEQAF----EFAIncSSiSADKRLR 547
                 699999***4458877754....3333212233577666 PP

  == domain 4  score: 16.1 bits;  conditional E-value: 1.7e-06
                 EEEEEEESSSSE.EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGHssv.tslafspdgawlasGsdDgtvriWd 38 
                 + l+tl+GH+   +++++ +dg  +a+++ D++++iWd
  KHJ33368.1 565 EILKTLDGHNTFgNACDWADDGWTVATSGQDQKIKIWD 602
                 6799*****8888***66555555*************9 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 0.69
                 SEEEEEEETTSSEEEEE CS
        WD40  12 svtslafspdgawlasG 28 
                 ++t+++f+ dg+ l  +
  KHJ33368.1 669 DITGFDFCNDGQDLYVA 685
                 599**999999866555 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0     0.045     4e+02     239     264 ..     513     539 ..     509     555 .. 0.83
   2 ?    8.8   0.0   7.9e-05       0.7     258     293 ..     587     623 ..     566     656 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.045
    Ge1_WD40 239 ssllfldnhkee.sdeqfWrfaitgad 264
                 s+l +ld h+++   eq + fai +++
  KHJ33368.1 513 SCLRLLDAHNNKlISEQAFEFAINCSS 539
                 8999*******8679999*****9986 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 7.9e-05
    Ge1_WD40 258 faitgadnnselklWscelWtClqtikfaps.iessl 293
                 ++++++ +++ +k+W +  W+ +q i +    i++++
  KHJ33368.1 587 WTVATSGQDQKIKIWDARKWSTVQGICLPVAvIPTQM 623
                 6899999******************988655255544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (762 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.24s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 5472.25
//
Query:       KHJ33369.1  [L=773]
Description: putative fungal specific transcription factor domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0066   16.3   1.8      0.054   13.3   0.2    2.6  3  CxC3      CxC3 like cysteine cluster associated with KDZ tran
  ------ inclusion threshold ------
      0.039   14.4   1.4         11    6.6   0.2    2.9  2  Sod_Fe_N  Iron/manganese superoxide dismutases, alpha-hairpin


Domain annotation for each model (and alignments):
>> CxC3  CxC3 like cysteine cluster associated with KDZ transposases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.2     6e-06     0.054      51     100 ..     414     464 ..     401     470 .. 0.75
   2 ?    0.9   0.0     0.044     4e+02      81      93 ..     679     691 ..     662     697 .. 0.79
   3 ?   -3.7   0.0       1.2   1.1e+04      59      71 ..     708     720 ..     702     729 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 6e-06
        CxC3  51 Csavrea.kledyiesGfwpgspdessylfseelLllwyhlkhktpgtSer 100
                 C+   +  ++e      +w+ ++++ s+l+ ee+L +w  l +++ + ++ 
  KHJ33369.1 414 CDLFQQNrTIESHNIKKYWLTTISQISTLYNEEFLSMWRFLDKQSESLTKF 464
                 55544443556666668***************************9965544 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.044
        CxC3  81 eelLllwyhlkhk 93 
                 +++++ w+hl h 
  KHJ33369.1 679 RNVMQCWHHLCHH 691
                 689*******764 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 1.2
        CxC3  59 ledyiesGfwpgs 71 
                 ++ y+esG w   
  KHJ33369.1 708 ITRYMESGVWVPE 720
                 6789****99654 PP

>> Sod_Fe_N  Iron/manganese superoxide dismutases, alpha-hairpin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.2    0.0012        11      21      59 ..     311     349 ..     303     362 .. 0.87
   2 ?    5.4   0.1    0.0028        25      20      42 ..     679     704 ..     667     724 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0012
                 HHHHHHHHTHHHHHHHHHHHHHHCHHHHCHCCHHHHHHH CS
    Sod_Fe_N  21 etlelHhdkHhktYvnnlNkalekleeakkkleelvlkk 59 
                 e l+ H +k hk Y+  + +++++++++ +++++l++++
  KHJ33369.1 311 ECLHRHSEKNHKNYISMAEEIISNIKLELSNIDTLISQH 349
                 567889*************************99999774 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0028
                 HHHHH.HHHHTHHHHHHHH..HHHHH CS
    Sod_Fe_N  20 ketle.lHhdkHhktYvnn..lNkal 42 
                 +++++ +Hh  Hhkt ++n  +N+++
  KHJ33369.1 679 RNVMQcWHHLCHHKTPIDNtiVNALI 704
                 4555548**********994446665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (773 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.46
# Mc/sec: 5033.97
//
Query:       KHJ33370.1  [L=86]
Description: putative protein transport protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-33  113.4   2.5    4.9e-33  113.2   2.5    1.0  1  Yos1      Yos1-like
  ------ inclusion threshold ------
      0.032   13.0   0.4      0.038   12.7   0.4    1.0  1  MCLC      Mid-1-related chloride channel (MCLC)


Domain annotation for each model (and alignments):
>> Yos1  Yos1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.2   2.5   5.5e-37   4.9e-33       1      80 []       5      86 .]       5      86 .] 0.98

  Alignments for each domain:
  == domain 1  score: 113.2 bits;  conditional E-value: 5.5e-37
        Yos1  1 LgslleaalLliNaiaiLsedRfLariglssssaesafges..eeasvkakiinliaavrtlmripLiviNilvivyelvlG 80
                +g+l+++++Ll+NaiaiLsedRfLar+g+s++ +e++fg+    +as+k+k+inl++++rtlmripLi+iN+++i+ye+ lG
  KHJ33370.1  5 FGNLIYLSVLLVNAIAILSEDRFLARVGWSNAIVEPSFGAVglGDASIKSKLINLMTSIRTLMRIPLIIINTVIIIYEIALG 86
                799************************************99999***********************************998 PP

>> MCLC  Mid-1-related chloride channel (MCLC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.4   4.2e-06     0.038     280     345 ..      10      80 ..       7      85 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4.2e-06
        MCLC 280 yyelllvnpillvpptkala.vtftnfvtep.lkyigkgtgef...ikalmkeipvllqipvlvilalavl 345
                 y  +llvn i ++   + la v ++n ++ep +  +g g   +   +  lm  i +l++ip+++i ++ ++
  KHJ33370.1  10 YLSVLLVNAIAILSEDRFLArVGWSNAIVEPsFGAVGLGDASIkskLINLMTSIRTLMRIPLIIINTVIII 80 
                 7889**************99789*******94456777665441114469***********9999887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      189  (0.0105416); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 632.09
//
Query:       KHJ33371.1  [L=375]
Description: putative actin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   4.4e-150  499.8   0.0   1.7e-149  497.9   0.0    1.7  1  Actin     Actin


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  497.9   0.0  9.6e-154  1.7e-149       2     407 .]       3     375 .]       2     375 .] 0.98

  Alignments for each domain:
  == domain 1  score: 497.9 bits;  conditional E-value: 9.6e-154
       Actin   2 devsavVlDnGssttraGyagedaPkavipslvgkprgrkvea.....klyvgdealtkrpelevrspvedGvvedwdaveelwehvlkeelkvdpeeh 95 
                 +ev a+V+DnGs++++aG+ag+daP+av+ps+vg+pr++  +      + yvgdea++kr+ l++r+p+e+Gvv++wd++e++w+h++++el+v peeh
  KHJ33371.1   3 EEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMIgmgqkDSYVGDEAQSKRGILTLRYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEH 101
                 689************************************9887999999************************************************** PP

       Actin  96 pllltepplnppkqrekalEivfEkfkvpalylaksavlsafasgkstglvvDsGasvtsvvpVldGyvLkkairrsdlgGkaLteqlkellssknvev 194
                 p+llte+p np+++rek+++ivfE+f+ pa+y++ +avls++asg++tg+v+DsG++vt+vvp+++G++L +ai+r+d++G++Lt++l+++l ++    
  KHJ33371.1 102 PVLLTEAPINPKSNREKMTQIVFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHVVPIYEGFSLPHAIARVDMAGRDLTDYLMKILAER---- 196
                 **********************************************************************************************8.... PP

       Actin 195 tprylikkkkvveaessaekeelekltesyktleeeevleeiKesvcevsedpeg..deeksssspeksYeLPDgseiklgeeRfkvpEiLFdpsligs 291
                                           ++ ++t++e+e++++iKe++c+v+ d+e+  +++++sss eksYeLPDg++i++g+eRf++pE+LF+ps +g 
  KHJ33371.1 197 --------------------------GYTFSTTAEREIVRDIKEKLCYVALDFEQeiQTASQSSSLEKSYELPDGQVITIGNERFRAPEALFQPSVLGL 269
                 ..........................9***************************977777778************************************ PP

       Actin 292 esaleeekskllgiselivaainacdvdlrpeLlanivvtGGnsllpglteRlekelaqlaskgvkvkiiapeeerkysaWiGGSiLAslgtfqqlwvs 390
                 es          gi+  ++++i++cdvd+r++L+ niv++GG++++pg+++R++ke+++la++++kvkiiap+ erkys+WiGGSiLAsl+tfqq+w+s
  KHJ33371.1 270 ESG---------GIHVTTFNSIMKCDVDVRKDLYGNIVMSGGTTMYPGISDRMQKEITALAPSSMKVKIIAPP-ERKYSVWIGGSILASLSTFQQMWIS 358
                 ***.........*************************************************************.************************* PP

       Actin 391 kqEYeEqGssvverkck 407
                 kqEY+E G+s+v+rkc+
  KHJ33371.1 359 KQEYDEAGPSIVHRKCF 375
                 ****************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2631.70
//
Query:       KHJ33372.1  [L=1071]
Description: putative sec8 exocyst complex component specific domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-46  157.7   2.8    1.7e-46  157.7   2.8    2.3  2  Sec8_exocyst  Sec8 exocyst complex component specific domain
    2.3e-08   33.7   2.8    2.3e-08   33.7   2.8    2.4  2  Vps54_N       Vacuolar-sorting protein 54, of GARP complex
     0.0014   18.7   1.2     0.0056   16.7   1.2    2.1  1  YcbB          YcbB domain
  ------ inclusion threshold ------
       0.22   11.7  12.5       0.92    9.6   0.1    4.1  4  Vps51         Vps51/Vps67
       0.53   10.4   4.0        0.4   10.8   0.7    2.6  2  Swi5          Swi5
       0.87    9.6   2.5        3.6    7.6   0.1    3.1  3  HetR_C        Heterocyst differentiation regulator C-terminal
        5.3    7.8   9.1          1   10.1   0.3    4.1  4  Occludin_ELL  Occludin homology domain


Domain annotation for each model (and alignments):
>> Sec8_exocyst  Sec8 exocyst complex component specific domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.7   2.8   6.5e-50   1.7e-46       2     141 ..      81     220 ..      80     221 .. 0.98
   2 ?   -3.6   0.5       3.7   9.5e+03      73     123 ..     475     527 ..     463     529 .. 0.56

  Alignments for each domain:
  == domain 1  score: 157.7 bits;  conditional E-value: 6.5e-50
  Sec8_exocyst   2 LkevlnkikeeWpavlsddanpvelalsllDdssvGlahrlkefkqlkkqieeaLqevvnehhqaFnssiasYskilssiqesqekvselKesleea 98 
                   + +vl++ik+eWp + ++d+ pv++a++llD+ssvG+ah++++f+q+++ ++++L+ +v+++hq+Fnssi++Y+ki+ s+q++q++v++lK+s+ ++
    KHJ33372.1  81 IVAVLENIKREWPSMCEKDCVPVQIAIQLLDTSSVGRAHEYRQFEQTHRYLQDSLKAIVHQNHQGFNSSIGTYHKIQTSLQSAQKRVRNLKDSMIQS 177
                   56799******************************************************************************************** PP

  Sec8_exocyst  99 kkklstkkkeLkelnarsakykevieiLdaieelkkvpdkieq 141
                   k+++  +++eLk+l++ s++y+++i++L++ieel+ vpd++e+
    KHJ33372.1 178 KANIASTDPELKKLATASQQYSDLIQVLSEIEELRLVPDQLEA 220
                   *****************************************96 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 3.7
  Sec8_exocyst  73 sYskilssiqesqek.vselKesleeak.kklstkkkeLkelnarsakykevi 123
                   sY  +   i es+++    l++++++ +   +s+++ + ++++a+ ++++e+i
    KHJ33372.1 475 SYVTTDADIYESNQTkSGLLRQDIKKEQlFRFSDTDIKSNQMEAEFQELEEII 527
                   56666666666654403345565554331345666666667777777777766 PP

>> Vps54_N  Vacuolar-sorting protein 54, of GARP complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   2.8   8.9e-12   2.3e-08      36     155 ..     120     239 ..     105     276 .. 0.93
   2 ?    2.1   0.4     0.037        95      25      96 ..     754     826 ..     744     845 .. 0.69

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 8.9e-12
     Vps54_N  36 evkklksqhdvvskklsqlilekreefvkelseveeiekelkesvvickngrraLdlakkeltrtsLellakskkrqllkkllktltaikelrelekrl 134
                 e  ++++ h+++++ l+  + ++++ f++ ++  ++i+  l+++ + ++n +  + ++k +++ t+ el    +  q   +l + l++i elr +  +l
  KHJ33372.1 120 EYRQFEQTHRYLQDSLKAIVHQNHQGFNSSIGTYHKIQTSLQSAQKRVRNLKDSMIQSKANIASTDPELKKLATASQQYSDLIQVLSEIEELRLVPDQL 218
                 567999********************************************************************************************* PP

     Vps54_N 135 eelleeedysaAiqllletkq 155
                 e  ++e+ +  A+++l    +
  KHJ33372.1 219 EARISEKRFMTAVDILQAALR 239
                 ***************987655 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.037
     Vps54_N  25 ddelsyesiekevkklksqhdvvskklsqlilekre..efvkelseveeiekelkesvvickngrraLdlakke 96 
                 ++  + ++ie+ev +l +q + +s +l + il++++  ++    + ++ +  ++ke   i +n+     +a k+
  KHJ33372.1 754 NN-FDEKQIEEEVSQLIQQTNRISIQLDDIILDRETisSLCMLYASMKWLAVKIKELRYITQNTNDSSRTAVKN 826
                 44.78889***********************9876511333334556666666666666666555555555555 PP

>> YcbB  YcbB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   1.2   2.2e-06    0.0056      39     134 ..     132     230 ..     111     231 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2.2e-06
        YcbB  39 lpslkeiyeelaekk...easeeeiekevkaieqRiRRaikkalknlAslGledysnpkfeeYasklFdfkevrkkmkelekksesskgkinvkkFieg 134
                 + slk i ++  +       + ++i++ ++++++R+R    + +++ A+++ +d + +k  + ++++ d  +v ++++el+   ++ +++i+ k+F+++
  KHJ33372.1 132 QDSLKAIVHQNHQGFnssIGTYHKIQTSLQSAQKRVRNLKDSMIQSKANIASTDPELKKLATASQQYSDLIQVLSEIEELRLVPDQLEARISEKRFMTA 230
                 556777766666655544445789999**********9999999**************************************999999********986 PP

>> Vps51  Vps51/Vps67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   1.0    0.0013       3.4      28      81 ..     121     174 ..     104     180 .. 0.88
   2 ?    9.6   0.1   0.00036      0.92      33      76 ..     179     224 ..     175     226 .. 0.83
   3 ?   -0.6   0.2      0.54   1.4e+03      13      46 ..     495     531 ..     485     532 .. 0.81
   4 ?   -3.3   0.1       3.9   9.9e+03      63      78 ..     761     776 ..     759     782 .. 0.55

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0013
       Vps51  28 easllseiraldselkalVydnYskLisasdtIrkmksemdkldqklselkqai 81 
                 +++ ++  r l+ +lka+V +n++ + s   t +k+++++++ ++++ +lk+++
  KHJ33372.1 121 YRQFEQTHRYLQDSLKAIVHQNHQGFNSSIGTYHKIQTSLQSAQKRVRNLKDSM 174
                 4667899999****************************************9887 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00036
       Vps51  33 seiraldselkalVy..dnYskLisasdtIrkmksemdkldqklse 76 
                 ++i  +d elk l    + Ys+Li++ ++I++++   d+l++++se
  KHJ33372.1 179 ANIASTDPELKKLATasQQYSDLIQVLSEIEELRLVPDQLEARISE 224
                 6788888888877542289***************999999999886 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.54
       Vps51  13 rellakstl...kellkveasllseiraldselkalV 46 
                 r+ ++k+ l   ++++ + +++++e ++l++ ++++V
  KHJ33372.1 495 RQDIKKEQLfrfSDTDIKSNQMEAEFQELEEIIRSTV 531
                 5666677766668999999999999999999999988 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 3.9
       Vps51  63 mksemdkldqklselk 78 
                 +++e+++l q+++ ++
  KHJ33372.1 761 IEEEVSQLIQQTNRIS 776
                 5555556666555555 PP

>> Swi5  Swi5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.7   0.00015       0.4       2      73 ..     164     235 ..     162     237 .. 0.96
   2 ?   -3.8   0.1       5.7   1.5e+04       7      23 ..     760     776 ..     756     781 .. 0.58

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00015
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTSHCGGGHH CS
        Swi5   2 eaeikeleeqleelekelaelkeelkekkdpeetvkrhIklLheYNEiKDvgqgLigliAeargvrikevfe 73 
                 ++++++l++ + + ++++a+++ elk+ +++++  ++ I+ L e  E++ v  +L  +i e+r ++ +++++
  KHJ33372.1 164 QKRVRNLKDSMIQSKANIASTDPELKKLATASQQYSDLIQVLSEIEELRLVPDQLEARISEKRFMTAVDILQ 235
                 789999**************************************************************9986 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 5.7
                 HHHHHHHHHHHHHHHHH CS
        Swi5   7 eleeqleelekelaelk 23 
                 ++ee++++l ++ + ++
  KHJ33372.1 760 QIEEEVSQLIQQTNRIS 776
                 55566666666655554 PP

>> HetR_C  Heterocyst differentiation regulator C-terminal Hood domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.1      0.55   1.4e+03      29      50 ..     203     224 ..     197     249 .. 0.74
   2 ?    7.6   0.1    0.0014       3.6      33      57 ..     505     529 ..     495     532 .. 0.83
   3 ?   -2.7   0.0       2.3   5.8e+03       8      28 ..     695     715 ..     689     720 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.55
      HetR_C  29 kvlrvleeldippekleqalee 50 
                 +vl  +eel + p++le  ++e
  KHJ33372.1 203 QVLSEIEELRLVPDQLEARISE 224
                 5666778888888888776665 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0014
      HetR_C  33 vleeldippekleqaleeldeiire 57 
                  + + di ++++e  ++el+eiir+
  KHJ33372.1 505 RFSDTDIKSNQMEAEFQELEEIIRS 529
                 45678******************96 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 2.3
      HetR_C   8 imvedtaryfrlmrdwaerkp 28 
                 +++ +  ryf     w +  +
  KHJ33372.1 695 LIIAQMKRYFEHCNAWFKSLT 715
                 6788889***99999977655 PP

>> Occludin_ELL  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.52   1.3e+03      69      92 ..     115     138 ..      76     144 .. 0.73
   2 ?   10.1   0.3   0.00041         1      14      69 ..     143     201 ..     135     224 .. 0.73
   3 ?   -1.9   0.2       2.3   5.8e+03      32      45 ..     514     527 ..     465     564 .. 0.65
   4 ?   -0.8   0.0         1   2.7e+03      17      68 ..     704     752 ..     697     778 .. 0.50

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.52
  Occludin_ELL  69 lkkdpeyqekkkrceyLkekLshi 92 
                   + + +ey++ ++ ++yL++ L+ i
    KHJ33372.1 115 VGRAHEYRQFEQTHRYLQDSLKAI 138
                   556788888899999999888877 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00041
  Occludin_ELL  14 kaeFnkeYkeYkelhaeleevskkfseLerelkelkegsk....eykkieeeilqeykkl 69 
                    + Fn+   +Y++++++l++++k++++L++ + ++k +      e kk++    q+y++l
    KHJ33372.1 143 HQGFNSSIGTYHKIQTSLQSAQKRVRNLKDSMIQSKANIAstdpELKKLATA-SQQYSDL 201
                   578999***********************77766665544444466666665.5666554 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 2.3
  Occludin_ELL  32 eevskkfseLerel 45 
                   ++++++f+eLe+ +
    KHJ33372.1 514 NQMEAEFQELEEII 527
                   44444444444333 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 1
  Occludin_ELL  17 FnkeYkeYkelhaeleevskkfseLerelkelkegskeykkieeeilqeykk 68 
                   F++  + +k+l ++++e  + + +L++ l + + +   ++++++++++++k 
    KHJ33372.1 704 FEHCNAWFKSLTSNVREPGNVVLKLSASLASKPGD---IQDLMKNLWDSLKT 752
                   45555555666666666666666666555544333...33333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1071 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1299  (0.0724525); expected 358.6 (0.02)
Passed bias filter:                      729  (0.0406604); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.83u 0.29s 00:00:01.11 Elapsed: 00:00:00.44
# Mc/sec: 7274.42
//
Query:       KHJ33373.1  [L=499]
Description: putative glucan synthesis regulatory protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.4e-31  108.0   0.0    8.2e-31  107.2   0.0    1.5  1  SMI1_KNR4  SMI1 / KNR4 family (SUKH-1)


Domain annotation for each model (and alignments):
>> SMI1_KNR4  SMI1 / KNR4 family (SUKH-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.2   0.0   4.6e-35   8.2e-31       1     132 [.     159     334 ..     159     335 .. 0.90

  Alignments for each domain:
  == domain 1  score: 107.2 bits;  conditional E-value: 4.6e-35
                 ---HHHHHHHHHHHTS---HHHHHHHHHHTSEEEEETTSEEETTEEEEEE-THHHHS.......................................... CS
   SMI1_KNR4   1 pateedlqefekdlgikLPndyreflkltnGgelfgesnglifglkllsldeieeer..................................eesrsss. 64 
                 ++t +dl+e+e +l+++LP d+re+l+ ++G+e +g   g+ifg +ll+++ei +e+                                  +     s 
  KHJ33373.1 159 GCTCNDLNELEHQLDCSLPLDVRESLQVHDGQERGGLPTGIIFGSMLLDCEEIVQEWenwkkvnqayltepvnynpavpvkafggsssssrN-----Si 252
                 7******************************9999999**************8888878889999999999999999999999987533320.....25 PP

                 ..........HHHCCCHHH.HHHCHHCCSSTTEEEEEEETTCEEEECEEEE..TTTTEEEECC.HHHGG-EEEESSHHHHHH CS
   SMI1_KNR4  65 ..........eeladdkek.kkiprqralphgwipfatdgggnyicidlsp..qgeegqvilf.rdddekfqiadsfgdfll 132
                           e la+++++ + ++++ ++++ wip+++d+ggn +++dl+p   g++gqvilf rd+d k++++ s+++fl+
  KHJ33373.1 253 sqpqnplwrqELLARQDSQpPDAIQRVYAHPAWIPLVRDWGGNNLAVDLAPgpAGRWGQVILFgRDYDCKYVVSRSWSAFLA 334
                 6777888898888******999999999999********************************9999*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3660.28
//
Query:       KHJ33374.1  [L=710]
Description: putative metallopeptidase rxlr effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   3.3e-152  507.9   0.0     5e-152  507.3   0.0    1.2  1  Peptidase_M3  Peptidase family M3
  ------ inclusion threshold ------
      0.088   12.9   0.7        5.1    7.2   0.2    3.0  3  F_actin_bind  F-actin binding
        0.1   12.9   0.2       0.52   10.6   0.1    2.2  2  Rx_N          Rx N-terminal domain


Domain annotation for each model (and alignments):
>> Peptidase_M3  Peptidase family M3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  507.3   0.0  8.4e-156    5e-152       8     457 ..     238     708 ..     232     709 .. 0.97

  Alignments for each domain:
  == domain 1  score: 507.3 bits;  conditional E-value: 8.4e-156
                   HHHHHHHHHHHCTTTCCSS..THHHHHHHHHHHHHHHHHHHTT-SSHHHHHHTTSTT-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC...CT CS
  Peptidase_M3   8 relRkeayeashskaaeqrntlensklleellklraelAkllgyesyaelaledkmaknpetvldfleelvkklrpllekelkllkelkkke...lg 101
                    e+R +++ +s +k++      +n++l++e+++lr+e A+llgy+++a+++++dkmak p tv +fl +l+++l+p + ke+k l e+k ++   +g
    KHJ33374.1 238 SETRMKMMLESENKCN------QNVPLFRETIILRDEAARLLGYPNHAAFRIADKMAKDPATVNKFLGDLRERLTPGGAKEIKHLMEIKTEDlknRG 328
                   69************99......78*****************************************************************99999944 PP

                   -S....SS--CCCHHHHHHHHHCCCCS--CCCCGGG-BHHHHHHCHHHHHHHHHTEEEEEETTS.............--SSTT-EEEEEEET..TT- CS
  Peptidase_M3 102 le....gelqpwDvaYYsekqreekydldqeelkeyfpletvleGllelfeeLfGikfveekdak...........gevwhedVrkleVvde.ilse 182
                   le    g+++ wD ++Y + + e+++++d+++++eyfpl+ +++G+l++fe LfG +f e+ d++           + vwhedV++++V+++  + +
    KHJ33374.1 329 LEasndGNYYLWDSRFYHRLMVEKEFSIDEQKIAEYFPLQSTIKGMLKIFEDLFGFEFIEISDENraktsstgkaeDIVWHEDVKVFAVWNDeGEGG 425
                   4444689********************************************************999*************************999999 PP

                   EEEEEEEEEEC--TTS-SS-EEEEEE--B..TTS-B--EEEEEEEEE---BTTS--B--HHHHHHHHHHHHHHHHHHC--BSSGGGSTT-S-CCCCC CS
  Peptidase_M3 183 gligeiylDlyerkgKrggAasfglvksr..edgtrqlpviylllNftkpsskkPsLLtldevetLfHEfGHsmHsllsrteysnvsgtnvpidfvE 277
                    ++g++ylDl++r+gK+ +Aa+f+l++++   +gtr++p+++l++Nf+kp+++kPsLL++dev tLfHE+GH++H+l +rt++s+++gt+v +dfvE
    KHJ33374.1 426 DFVGYLYLDLHPRPGKYAHAANFSLQPGFtyPNGTRRYPATALVCNFSKPTKEKPSLLKHDEVVTLFHELGHGIHDLSARTQFSQFHGTSVVRDFVE 522
                   ****************************97669**************************************************************** PP

                   HHHHHHHHGGGSHHHHHCC-B-TTT--B--HHHHHHHHCCCCTTHHHHHHHHHHHHHHHHHCTT-TCCGHH....HHHHHHHHHHCTTSCTTBT... CS
  Peptidase_M3 278 lpSqlmEnlltepevlkslskhyetgeaipeelleklikaknvnaalellrqlvfaafdqelHeeaeeeqilkkdlletyaelrkkflglpvap... 371
                   +pSq++En++++p++lkslskhy++ge+ip+el++kli ak+vn+al +lrql+f+  d+ +H+ +++e++ +++++e y+elr +++g++ ++   
    KHJ33374.1 523 APSQMLENWCWTPLQLKSLSKHYSSGESIPDELIDKLIGAKHVNDALLNLRQLHFGIYDMFIHTPKDHEEVMSFKFSELYNELRTQISGIKGPEalg 619
                   *****************************************************************************************99999999 PP

                   ....TSSGGGC-CCCHTSS-TTTTCHHHHHHHHHHHHHHCCHHCCTT-CCHHHHHHHHTTTTTTSS-HHHHHHCCCSS---SHHHHHHCT CS
  Peptidase_M3 372 ....deasqasFghlfahgYaanYYsylyaevlaldifekffeedplnretGeryrkeiLsrGgskdplellkkflgrepsadallkalg 457
                       + + qa+Fghl+ +gY+a+YY+yl ++v+++d+f+++f++dp + + G+ryr  +L++Ggs+d++++l +flgr ps ++++k+lg
    KHJ33374.1 620 mknnWGNGQATFGHLM-GGYDAGYYGYLSSQVYSTDMFYSVFKKDPRDGKEGRRYRHMVLEKGGSQDEMKTLVDFLGRAPSNEPFYKELG 708
                   9999999999*****7.****************************99999*************************************997 PP

>> F_actin_bind  F-actin binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.2   0.00085       5.1      10     101 ..      34     125 ..      24     127 .. 0.75
   2 ?    0.7   0.0     0.089   5.3e+02       4      70 ..     110     171 ..     107     187 .. 0.60
   3 ?    2.0   0.0     0.035   2.1e+02      61      87 ..     595     623 ..     549     631 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.00085
  F_actin_bind  10 elvelleaalsnlkesvsssq....esaqllqlldkvenlhssCsgyvdsipphakFaFrellsrLesqsreLrsavgsknssenekllqdlqstv 101
                   e++++l+a+l+n +e+vs ++    ++ +l++ ++ + +l++   g+ + ++  ak  +r++ s+ e  ++e  +  g    ++  +l+++++++v
    KHJ33374.1  34 EICNELKATLDNVTENVSVEKanfaNTVKLMAEAEDLASLKTRLIGFYQAVSTDAK--LRDASSKAEEIMDEFSIEAGM--REDIFTLVNAVYQAV 125
                   67889999999999999988885555566666677788888888888889999999..999999999999998866554..333345666666665 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.089
  F_actin_bind   4 skesiLelvelleaalsnlkesvsssqesaqllqlldkvenlhssCsgyvds...ipp.hakFaFrellsr 70 
                    +e i +lv+++ +a+++ k++   +          + ++ l ++ ++y+ +   i +   + +F+e+  r
    KHJ33374.1 110 MREDIFTLVNAVYQAVKTGKSN---EDL------NPESLRLLEKEQNSYIRNglgIEKgEKRDRFKEIKKR 171
                   6889999999999999998888...331......2355555555555666555555554444444444444 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.035
  F_actin_bind  61 kFaFrellsrLesqsreLr..savgskns 87 
                    F+F el++ L +q   ++   a g kn+
    KHJ33374.1 595 SFKFSELYNELRTQISGIKgpEALGMKNN 623
                   5*************999987655565655 PP

>> Rx_N  Rx N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   8.7e-05      0.52      60      83 ..      89     112 ..      87     148 .. 0.82
   2 ?   -2.4   0.0         1   6.1e+03      18      32 ..     163     177 ..     134     181 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 8.7e-05
        Rx_N  60 elrdlaydaeDvlDefetealrrk 83 
                 +lrd++ +ae ++Def++ea+ r+
  KHJ33374.1  89 KLRDASSKAEEIMDEFSIEAGMRE 112
                 79******************9887 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1
        Rx_N  18 kllkgvkeeleklkd 32 
                  ++k++k+ l +l+ 
  KHJ33374.1 163 DRFKEIKKRLSQLQI 177
                 444555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (710 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 4900.85
//
Query:       KHJ33375.1  [L=331]
Description: putative 3-ketoacyl- reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-36  125.9   0.2    3.7e-36  124.4   0.1    1.6  2  adh_short        short chain dehydrogenase
    5.4e-19   68.7   0.0      7e-19   68.3   0.0    1.1  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
    1.4e-06   28.4   0.1    3.6e-06   27.0   0.1    1.7  1  KR               KR domain
  ------ inclusion threshold ------
      0.099   11.8   0.2       0.13   11.4   0.2    1.2  1  Polysacc_synt_2  Polysaccharide biosynthesis protein


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.4   0.1   8.2e-40   3.7e-36       3     188 ..      55     246 ..      53     252 .. 0.92
   2 ?   -1.5   0.0      0.33   1.5e+03     134     158 ..     264     288 ..     261     295 .. 0.82

  Alignments for each domain:
  == domain 1  score: 124.4 bits;  conditional E-value: 8.2e-40
                 EEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT....TSEEEEEE-TTT.SHHHHHHHHHHHHHHHSSESEEEE---S..S--SSGG CS
   adh_short   3 vlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee....gakalaiqvDvt.dreevealvekavkklgkldvLvnNAGi..tgsgpfs 94 
                 ++vtGas+G+G+++a +la++G+++++v+r+++kle++ +e+ ++    g ++ ++++D + +r+e  + +++ v+    + +LvnN+G   + ++pf 
  KHJ33375.1  55 AVVTGASDGLGKEYAIQLAQKGFSLILVSRTASKLEALSTEITQKfvgsGIQVKTLAMDFShNRQEDYDKFQALVD-EHDVGILVNNVGQshSIPVPFI 152
                 89******************************************999888899*******9544444444444444.468**********888899999 PP

                 GCSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHH CS
   adh_short  95 elseeewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmak 188
                  + +ee++++i++N+ +++++t+ v+p m+++++G I +++S  g+ p + +a Ys sKa++++++ +l  el+++++ v  v   lv T+m k
  KHJ33375.1 153 LTPKEEVRDIIAINVIATLKVTQIVAPGMVQRKRGLILTMGSFGGLLPTPLLATYSGSKAFLQQWSTALGGELKSSNVDVELVISYLVTTAMSK 246
                 9999****************************************************************************************86 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.33
                 EEEGGGTSB-TTBHHHHHHHHHHHH CS
   adh_short 134 vsSvagkvpvagvaaYsAsKaavag 158
                 v S +g+ + a+  aY+++ +  +g
  KHJ33375.1 264 VLSKIGRSGGAQNMAYTSTPFWGHG 288
                 77999***********998665555 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.3   0.0   1.6e-22     7e-19       1     180 [.      59     246 ..      59     270 .. 0.87

  Alignments for each domain:
  == domain 1  score: 68.3 bits;  conditional E-value: 1.6e-22
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGH.HHHHHHHHHHTTSE.E....EE--TTSHHHHH.HHHHHHHHHHSSEEEEEE-----EGCSS-GGGH CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneea.kkrveelaeelgae.v....lecDVtdeeqve.alveevvekfgklDilvnnagiapklkgpflet 90 
                   Ga  g+G++ A +la++G +++l+ +  ++ ++  +e+++++  + +    l++D +++ q + + ++++v+++  + ilvnn+g ++++  pf+ t
    KHJ33375.1  59 GASDGLGKEYAIQLAQKGFSLILVSRTASKlEALSTEITQKFVGSgIqvktLAMDFSHNRQEDyDKFQALVDEH-DVGILVNNVGQSHSIPVPFILT 154
                   899************************99988888888888653333447799999876554414455555553.899******************* PP

                   -HHHHHHHHHHHTHHHHHHHHHHHH.HCTSC.CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGG CS
  adh_short_C2  91 sreefdraldvnlyslfllakaalp.lmkeg.gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaas 180
                   ++ee+++++++n+ +++++++ ++p +++++ g i+++ s+g+   +p  + y+ +Ka l++ + +l  el + ++ v  v   ++ T +++
    KHJ33375.1 155 PKEEVRDIIAINVIATLKVTQIVAPgMVQRKrGLILTMGSFGGLLPTPLLATYSGSKAFLQQWSTALGGELKSSNVDVELVISYLVTTAMSK 246
                   *************************8666667******************************************************999865 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.1   8.1e-10   3.6e-06       2     156 ..      53     214 ..      52     230 .. 0.65

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 8.1e-10
                 EE.EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS...--HHHHHHHHHHHHTT-EEEE----TT-HHHHH.HHHHHHHHHSS---EEEE------..-- CS
          KR   2 ty.litGGlGgLGlelarwlaekgarhlvllsRsa.aadedskaliaelealgaevevvaaDvsdkdave.alleeikaeeppikGvihaAgvlr..dk 95 
                 ty ++tG+  gLG+e a +la+kg  +l+l+sR+a + ++ s++ ++++  +g++v+++a+D s++ +     ++++  +e+ +   ++  g ++    
  KHJ33375.1  53 TYaVVTGASDGLGKEYAIQLAQKGF-SLILVSRTAsKLEALSTEITQKFVGSGIQVKTLAMDFSHNRQEDyDKFQALV-DEHDVGILVNNVGQSHsiPV 149
                 55379*******************7.6999****83455667788899999************986553302222222.22334434444443331133 PP

                 -TTT--HHHHHHHHTTTTHHHHHHHHHTTT....S--SEEEEEEEHHHHH--TT-HHHHHHHHHH CS
          KR  96 lleemtaedleqvlapKvkGawnLhelled....esldffvlfSSiagllgsagqanYaaaNafl 156
                 ++  + +e+++ ++a  v ++  + +++++    ++  +++++ S +gll ++  a+Y+   afl
  KHJ33375.1 150 PFILTPKEEVRDIIAINVIATLKVTQIVAPgmvqRKRGLILTMGSFGGLLPTPLLATYSGSKAFL 214
                 44555566666666666666666666666555545555666666666666666666666666665 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   2.9e-05      0.13       2     114 ..      56     176 ..      55     185 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.9e-05
                      EEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--...TT-HHHHHHHTT..T-SEEEE------... CS
  Polysacc_synt_2   2 lvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigd...vrdkerlekaleelkvdvvfhaAAlKh... 89 
                      +vtGa+  +G+e   q+++k   ++il++r+  kl ++++e+++++  + ++v+++++  +    +d ++ + +++e++v ++++     h   
       KHJ33375.1  56 VVTGASDGLGKEYAIQLAQKGF-SLILVSRTASKLEALSTEITQKFVGSGIQVKTLAMDFShnrQEDYDKFQALVDEHDVGILVNNVGQSHsip 148
                      69**************998876.68899*************999*9999998886555333111356778889999999998888777766555 PP

                      HHHH...HHSHHHHHHHHHHHHHHHHHH CS
  Polysacc_synt_2  90 VPlv...eenpleaiktNvlgtenviea 114
                      VP +    e++ + i  Nv++t +v ++
       KHJ33375.1 149 VPFIltpKEEVRDIIAINVIATLKVTQI 176
                      5654333556667788888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       708  (0.0394891); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 2613.69
//
Query:       KHJ33376.1  [L=130]
Description: hypothetical protein EV44_g3524 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       284  (0.0158403); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 939.31
//
Query:       KHJ33377.1  [L=215]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0034   17.4   0.4       0.92    9.5   0.2    2.2  2  DUF1451     Zinc-ribbon containing domain
     0.0047   16.7   0.0     0.0069   16.1   0.0    1.1  1  EMC3_TMCO1  Integral membrane protein EMC3/TMCO1-like
  ------ inclusion threshold ------
      0.037   13.8   0.8       0.13   12.0   0.8    2.1  1  DUF508      Domain of unknown function (DUF508)
       0.15   12.2   0.1        0.5   10.6   0.0    1.9  2  DUF3168     Protein of unknown function (DUF3168)


Domain annotation for each model (and alignments):
>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0016         7      24      74 ..      69     119 ..      47     126 .. 0.87
   2 !    9.5   0.2   0.00021      0.92      26      56 ..     126     156 ..     120     201 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0016
     DUF1451  24 klseaeeltkeelelvaeylkrDleeaarsleeskeeleewlsldleliee 74 
                 ++++a++  +++ +++ +yl +D++e+ ++ + +++ l+  ls+ l++i++
  KHJ33377.1  69 FTNQASQPLDDDSSQMYSYLPKDIREIIEQRRRRERALHVRLSICLSVISN 119
                 5677788888999**********************9999999999999987 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00021
     DUF1451  26 seaeeltkeelelvaeylkrDleeaarslee 56 
                 + +++++kee++lv++yl++ +e +a+s ++
  KHJ33377.1 126 VYKNDMEKEEADLVRNYLQQAIELLAASDNA 156
                 6789****************99988887665 PP

>> EMC3_TMCO1  Integral membrane protein EMC3/TMCO1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.5e-06    0.0069      23      94 ..     110     195 ..     106     196 .. 0.92

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.5e-06
  EMC3_TMCO1  23 vgiltgllsellqkllidkkkmeke.qkrekelqkrarelqk.............ngdklklkklekrqeelmedqsemmmdqmkp 94 
                 ++i+ +++s++ + ll++k+ meke  ++ ++++++a+el               + + lk k++ + +  ++++  ++++ ++k+
  KHJ33377.1 110 LSICLSVISNIESTLLVYKNDMEKEeADLVRNYLQQAIELLAasdnapksppiphQTKPLKSKSFSQGKDIIKNKALNLSSTTLKS 195
                 68999*****************998678999********9999***********9999***************9999999998886 PP

>> DUF508  Domain of unknown function (DUF508)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.8   2.9e-05      0.13      95     136 ..      98     140 ..      23     151 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.9e-05
      DUF508  95 arqlkdaklnPrlsyCiGelnyknskP.vlsedlkktlaelaa 136
                  r+ ++  l+ rls C+  ++ ++s   v ++d++k  a+l +
  KHJ33377.1  98 QRRRRERALHVRLSICLSVISNIESTLlVYKNDMEKEEADLVR 140
                 34556668****************9862789******999976 PP

>> DUF3168  Protein of unknown function (DUF3168)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00011       0.5      12      80 ..       7      77 ..       1     110 [. 0.77
   2 ?   -1.1   0.0      0.47   2.1e+03      52      86 ..     119     153 ..     111     161 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00011
     DUF3168 12 vtalvggrvyd.rapqgaalPyivlgpvqsrdasalcg...dgaevrvqldvwarepgraeaka.laaavraaL 80
                v al  +   +  +p++a++P +++  ++s++++++++   +++  r +l+ +a  p++++a++  ++++++ L
  KHJ33377.1  7 VPALPTD-TRPtLPPPPAPAPSASFSLPNSTPLNFTSVnecNTQSTRHTLTPVA--PSKRAAQNtFTNQASQPL 77
                5555555.3556799*********************887778888888998888..666666540455555555 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.47
     DUF3168  52 evrvqldvwarepgraeakalaaavraaLddaala 86 
                 ++  +l v++    + ea+ +++  ++a++  a++
  KHJ33377.1 119 NIESTLLVYKNDMEKEEADLVRNYLQQAIELLAAS 153
                 66677788887788888999999999999666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       782  (0.0436165); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 1593.75
//
Query:       KHJ33378.1  [L=747]
Description: putative ring finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-26   92.9   0.0    3.1e-26   91.5   0.0    1.7  1  BRAP2         BRCA1-associated protein 2
    1.8e-17   63.4  10.2    5.2e-17   61.9  10.2    1.8  1  zf-UBP        Zn-finger in ubiquitin-hydrolases and other pro
    2.7e-08   34.0   9.7    2.7e-08   34.0   9.7    2.1  1  zf-RING_2     Ring finger domain
    5.6e-07   29.3   9.8    1.5e-06   28.0   9.8    1.8  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    7.7e-05   22.6   5.3     0.0005   20.0   5.3    2.4  2  zf-RING_UBOX  RING-type zinc-finger
    8.2e-05   22.4   8.8    0.00029   20.7   8.8    2.0  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
      9e-05   22.7   6.4    0.00027   21.1   6.4    1.9  1  zf-rbx1       RING-H2 zinc finger domain
    9.5e-05   22.1   4.5    0.00032   20.4   4.5    2.0  1  zf-RING_11    RING-like zinc finger
    0.00083   19.3   8.0    0.00083   19.3   8.0    2.1  1  zf-RING_5     zinc-RING finger domain
     0.0011   19.0   6.3     0.0033   17.5   6.3    1.7  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
      0.003   17.4   7.4      0.003   17.4   7.4    2.4  2  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
       0.45    9.8   6.5       0.92    8.8   6.5    1.4  1  DUF4407       Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> BRAP2  BRCA1-associated protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.5   0.0   2.1e-29   3.1e-26       4      94 ..     239     330 ..     237     334 .. 0.96

  Alignments for each domain:
  == domain 1  score: 91.5 bits;  conditional E-value: 2.1e-29
       BRAP2   4 vsrstllcilavPsylsladllkFvg.svlekvseiriirdgkenrymvLikfkdqesadeFykefngkkFssleeevChvvfvkevevtes 94 
                 +++st+lci avPsyl+++ +l ++g ++ e+vs+ir++ +++  ry vL+kf+d ++a+++++++ng++F+++e+e+C+vvf+k+v ++++
  KHJ33378.1 239 KGESTILCIPAVPSYLTPSYFLAWIGeKTREQVSHIRMVTTERLARYLVLMKFRDVNTAKTWKENWNGRAFNNTEPETCNVVFIKTVSFSTP 330
                 5789*********************99************************************************************99875 PP

>> zf-UBP  Zn-finger in ubiquitin-hydrolases and other protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.9  10.2   3.5e-20   5.2e-17       1      60 [.     424     482 ..     424     484 .. 0.95

  Alignments for each domain:
  == domain 1  score: 61.9 bits;  conditional E-value: 3.5e-20
                 -TTTH--.SSEEEETTT--EEE-TTTT-HHHHHHHHH---EEEETTT--EEETTTTEEBE CS
      zf-UBP   1 CseCnsenknlWlCLkCghvgCgrksnghalkHyeetrHplavdlstlsvycyscddeve 60 
                 Cs+C+ + ++lW+CL Cg+vgCgr++ gha++H++++ H++a++++t+ v++y++d  v+
  KHJ33378.1 424 CSTCDCA-DDLWICLICGNVGCGRYKGGHAKDHWKQSAHCFALEIETQYVWDYAEDVWVH 482
                 *****55.9**********************************************98876 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   9.7   1.8e-11   2.7e-08       2      44 .]     361     401 ..     360     401 .. 0.88

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 1.8e-11
   zf-RING_2   2 eCpICleelssadsvl.llpCgHvfhreClerwlrssstCPlCr 44 
                 +Cp+Cle+++++  +l +l C+Hvfh+ Cl +w  ss  CP+Cr
  KHJ33378.1 361 TCPVCLERMDDTTGLLtIL-CQHVFHCACLLKWKDSS--CPVCR 401
                 7********9999977466.************98666..****9 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   9.8   9.8e-10   1.5e-06       2      40 .]     362     400 ..     361     400 .. 0.87

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 9.8e-10
  zf-C3HC4_2   2 CpiCldmlkdps..vvtpCgHvfCqkCilrsLeekneCPlC 40 
                 Cp+Cl+++ d++   ++ C+Hvf+  C+l++  + ++CP+C
  KHJ33378.1 362 CPVCLERMDDTTglLTILCQHVFHCACLLKW--KDSSCPVC 400
                 ********997522667*************9..778***** PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   5.3   3.4e-07    0.0005       1      35 [.     362     394 ..     362     403 .. 0.76
   2 ?   -0.7   0.2      0.98   1.5e+03       1       6 [.     397     402 ..     397     415 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 3.4e-07
  zf-RING_UBOX   1 CpIClelftdP..lv..lpCGHtFCreCl..welskslega 35 
                   Cp+Cle ++d   l+  l C+H+F+  Cl  w       + 
    KHJ33378.1 362 CPVCLERMDDTtgLLtiL-CQHVFHCACLlkW-------KD 394
                   *********887844224.**********544.......23 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.98
  zf-RING_UBOX   1 CpICle 6  
                   Cp+C+ 
    KHJ33378.1 397 CPVCRH 402
                   999986 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   8.8   1.9e-07   0.00029       1      41 []     362     400 ..     362     400 .. 0.97

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.9e-07
                 -TTT-S--SS-E...E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn..elleCkHsfCskCirkilksrkkvkCPlC 41 
                 Cp+Cle + +++   ++ C+H f+++C++k+ +     +CP+C
  KHJ33378.1 362 CPVCLERMDDTTglLTILCQHVFHCACLLKWKD----SSCPVC 400
                 ************9999***************99....78***9 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   6.4   1.8e-07   0.00027      13      55 .]     361     401 ..     357     401 .. 0.87

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 1.8e-07
     zf-rbx1  13 acieckapgdeecpvvlGeCgHaFHlhCiskWlktrkvCPlcr 55 
                 +c+ c +  d+++ + +  C+H+FH  C+ kW ++  +CP+cr
  KHJ33378.1 361 TCPVCLERMDDTTGLLTILCQHVFHCACLLKWKDS--SCPVCR 401
                 6999999999987777779*************765..9****8 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   4.5   2.1e-07   0.00032       2      29 .]     362     389 ..     361     389 .. 0.97

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 2.1e-07
  zf-RING_11   2 CsICLeefkpgqalfilpCsHtFHfkCI 29 
                 C +CLe + +   l +  C H+FH+ C+
  KHJ33378.1 362 CPVCLERMDDTTGLLTILCQHVFHCACL 389
                 ***************************5 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   8.0   5.6e-07   0.00083       2      44 .]     362     402 ..     361     402 .. 0.96

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 5.6e-07
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCrk 44 
                 C++C e++ ++ +  +  C+H+f+ +Cl k +  +  Cp+Cr+
  KHJ33378.1 362 CPVCLERMDDTTGLLTILCQHVFHCACLLKWK--DSSCPVCRH 402
                 ********************************..*******95 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   6.3   2.2e-06    0.0033      34      80 ..     361     403 ..     358     407 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 2.2e-06
                 --TTCSTTTTTS-.EEEBTTS-EEEHHHHHHHHHHHSTSSB-TTTSSB CS
  zf-ANAPC11  34 tcpsckfpGddcp.lvlGkckhnfhlhcilkwletetskglcpmcrqt 80 
                 tcp c    dd + l+   c+h+fh  c+lkw ++      cp+cr t
  KHJ33378.1 361 TCPVCLERMDDTTgLLTILCQHVFHCACLLKWKDS-----SCPVCRHT 403
                 8****98877765277778*************764.....69***987 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   7.4     2e-06     0.003       4      45 ..     361     402 ..     358     405 .. 0.74
   2 ?   -2.8   4.8       3.9   5.9e+03       4      23 ..     423     442 ..     420     446 .. 0.67

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 2e-06
                 B-TTTSSSBS-.EEETT..EEEEEE-HHHHHHHHHTT-B-TTT-- CS
  zf-C3HC4_3   4 eCviClerprn.vvllp..CgHlvlCeeCaekllkrkkkCpiCrr 45 
                 +C++Cler  + + ll   C+H++ C +C+ k+  ++ +Cp+Cr 
  KHJ33378.1 361 TCPVCLERMDDtTGLLTilCQHVFHC-ACLLKW--KDSSCPVCRH 402
                 7******965523333344****666.477777..99*******7 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 3.9
                 B-TTTSSSBS-EEETTEEEE CS
  zf-C3HC4_3   4 eCviClerprnvvllpCgHl 23 
                 +C+ C  ++  +++l Cg +
  KHJ33378.1 423 LCSTCDCADDLWICLICGNV 442
                 67777777777777777765 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   6.5   0.00062      0.92     145     252 ..     538     642 ..     500     652 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00062
     DUF4407 145 lqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakldatarlaalraelaeleaerake.raasqaaaaaddG 242
                 l ++++++++ +++l +  ++e++ ++ +          +a++  ++l+a++ + ++lk++l+ +a   ++++++ae ++e+a++  ++ +++++ + G
  KHJ33378.1 538 LTSQLESQREYFEDLINRSTAEANKASFAA----SSAARSATKVHEELKALEHAHNNLKSELTLQAHELKREKQRAEKTTEMARTfSKNLAEERRVSEG 632
                 455555555566666666666655544222....2235667778889999999999999998855555555555555566665551566677888899* PP

     DUF4407 243 llarlealdr 252
                 l++r+e l++
  KHJ33378.1 633 LMQRIEYLNQ 642
                 ******9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (747 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1712  (0.0954878); expected 358.6 (0.02)
Passed bias filter:                      582  (0.0324614); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.75u 0.26s 00:00:01.01 Elapsed: 00:00:00.45
# Mc/sec: 5016.23
//
Query:       KHJ33379.1  [L=514]
Description: putative prenyltransferase and squalene oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-37  126.9  20.5    7.3e-10   38.4   0.7    6.2  6  Prenyltrans  Prenyltransferase and squalene oxidase repeat


Domain annotation for each model (and alignments):
>> Prenyltrans  Prenyltransferase and squalene oxidase repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.9   0.9    0.0051        91      34      44 .]     145     155 ..     144     155 .. 0.94
   2 !   13.6   0.0   2.3e-06      0.04      13      44 .]     172     203 ..     169     203 .. 0.95
   3 !   24.3   0.0     1e-09   1.8e-05       2      44 .]     212     254 ..     211     254 .. 0.90
   4 !   38.4   0.7   4.1e-14   7.3e-10       8      44 .]     279     315 ..     277     315 .. 0.98
   5 !   28.3   0.4   6.1e-11   1.1e-06       2      43 ..     326     368 ..     325     369 .. 0.95
   6 !   29.6   0.2   2.4e-11   4.3e-07       3      41 ..     401     442 ..     400     445 .. 0.95

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.0051
                  HHHHHHHHHCT CS
  Prenyltrans  34 ywalaaLallG 44 
                  yw+l++La +G
   KHJ33379.1 145 YWCLNGLATMG 155
                  9*******998 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 2.3e-06
                  HSHTTS-BBSSTTSSBBHHHHHHHHHHHHHCT CS
  Prenyltrans  13 cQnedGGwggrpgsesdtyytywalaaLallG 44 
                  +Qn  GG+gg     s+++ ty  ++aLa++G
   KHJ33379.1 172 IQNVTGGFGGGFAQISHLAPTYAIILALAIVG 203
                  799***************************98 PP

  == domain 3  score: 24.3 bits;  conditional E-value: 1e-09
                  HHHHHHHHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHHHHCT CS
  Prenyltrans   2 dvekavefLlscQnedGGwggrpgsesdtyytywalaaLallG 44 
                  d++ +  +L s  ++dGG++ + ++e d++++y+a+ +++ll+
   KHJ33379.1 212 DRKAMWKWLGSLKQPDGGFQMSVDGEEDVRGAYCAVVIMSLLN 254
                  67777789999**************99*************985 PP

  == domain 4  score: 38.4 bits;  conditional E-value: 4.1e-14
                  HHHHHHSHTTS-BBSSTTSSBBHHHHHHHHHHHHHCT CS
  Prenyltrans   8 efLlscQnedGGwggrpgsesdtyytywalaaLallG 44 
                  e++  cQ  +GG + rp+ e++++yt++ala+L++lG
   KHJ33379.1 279 EWISQCQTFEGGISARPDAEAHGAYTFCALACLCMLG 315
                  7**********************************98 PP

  == domain 5  score: 28.3 bits;  conditional E-value: 6.1e-11
                  HHHHHHHHHHHHSH.TTS-BBSSTTSSBBHHHHHHHHHHHHHC CS
  Prenyltrans   2 dvekavefLlscQn.edGGwggrpgsesdtyytywalaaLall 43 
                  +++ ++ +L  +Q  ++GG++gr ++ +d++y+ w+  ++ l+
   KHJ33379.1 326 NIDLLISWLSARQYaPEGGFSGRTNKLVDGCYSHWVGGCWPLI 368
                  7899***********************************9886 PP

  == domain 6  score: 29.6 bits;  conditional E-value: 2.4e-11
                  HHHHHHHHHHHSH...TTS-BBSSTTSSBBHHHHHHHHHHHH CS
  Prenyltrans   3 vekavefLlscQn...edGGwggrpgsesdtyytywalaaLa 41 
                  +e +++++l c++   + GG+++ p ++sdty+t+++la+L+
   KHJ33379.1 401 REGLIRYILCCCQdmsKRGGLRDKPSHRSDTYHTCYVLAGLS 442
                  7899*************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 3444.39
//
Query:       KHJ33380.1  [L=115]
Description: hypothetical protein EV44_g3879 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
       0.12   11.6   0.6       0.15   11.2   0.6    1.2  1  ABC_sub_bind  ABC transporter substrate binding protein


Domain annotation for each model (and alignments):
>> ABC_sub_bind  ABC transporter substrate binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.6   8.5e-06      0.15      59      88 ..       3      33 ..       1      45 [. 0.90

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 8.5e-06
                  T--SEEEEESHHHHHHHHHH-SS.S-EEEEE CS
  ABC_sub_bind 59 ekpdlivgiatpaaqilksatkn.iPiVfaa 88
                  +++d+ ++i+t+ + i+k+ +++ iPiV+ +
    KHJ33380.1  3 HDIDIAIAISTTLSMIIKKIGIQqIPIVICT 33
                  789*****************9999****986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 900.02
//
Query:       KHJ33381.1  [L=476]
Description: hypothetical protein EV44_g0454 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   13.0   4.2       0.19   12.3   0.0    2.4  2  LPMO_10   Lytic polysaccharide mono-oxygenase, cellulose-degr


Domain annotation for each model (and alignments):
>> LPMO_10  Lytic polysaccharide mono-oxygenase, cellulose-degrading
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.1e-05      0.19     149     194 .]     187     250 ..      79     250 .. 0.70
   2 ?    0.7   1.9      0.04   7.2e+02      37     124 ..     289     384 ..     257     432 .. 0.48

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.1e-05
                 S...........CCTCEEEEEEEEET..SS--EEEEEEEEEEE.TSTSS.....SEEEEEEEEE CS
     LPMO_10 149 a...........pskeatyyrkvklP..egrtgehvllqvWqyvtanst.....qeaFynCaDv 194
                 +           +s e   ++ +klP  +g  g   +++vW++ t ++      +e++ +C+D+
  KHJ33381.1 187 KrakslgfssaaESPEVLCQTILKLPldAGSNGTYTIYWVWDWPTLDEAgkifkNETYTSCIDI 250
                 034556666665333333333455555599*************77755377777*********8 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.04
                 H....................HTHGHHHTTTG-EEET.............SHHHHSSTT-TTTTTTHHHTT....GGGGT.TSTS--...EEEESESEE CS
     LPMO_10  37 C....................ggaavqyeensvekek.............rlkaappdgglcgagdsrpneaggksglde.rgawakpvqttytegsei 101
                                      +              +              ++++ p+   c a++  +n+          +g++++   +++ eg+++
  KHJ33381.1 289 HtiaiskkvsrikinqektvaE-------K------EsmrkefkgevsvkDVETGNPRISECKANK--KNN--------LiPGSNNG---NNLDEGKVF 361
                 1223333333333322111111.......1......112221122232223333333333333333..222........12333444...667777777 PP

                 EEEEEESS-S-EEEEEEEEE-TT CS
     LPMO_10 102 efeveltapHktghfefyitkec 124
                   +  +ta+  +++ + ++ k++
  KHJ33381.1 362 SATGVMTAKNGKDKANTFAVKDQ 384
                 77777777776666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       960  (0.0535445); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3600.45
//
Query:       KHJ33382.1  [L=484]
Description: putative glycosyltransferase family 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-26   94.0   0.0    1.7e-26   93.5   0.0    1.2  1  Glyco_tranf_2_3  Glycosyltransferase like family 2
    2.1e-06   27.3   0.0    7.3e-06   25.6   0.0    1.8  1  Glyco_transf_21  Glycosyl transferase family 21
    2.4e-05   24.2   0.0    5.3e-05   23.1   0.0    1.5  1  Glycos_transf_2  Glycosyl transferase family 2


Domain annotation for each model (and alignments):
>> Glyco_tranf_2_3  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.5   0.0   2.9e-30   1.7e-26       3     229 ..      54     289 ..      52     290 .. 0.88

  Alignments for each domain:
  == domain 1  score: 93.5 bits;  conditional E-value: 2.9e-30
  Glyco_tranf_2_3   3 dlavlVptfneed.vlgevlesllaqeyprvevvvvvdesdaet.levaeelaaalpdvrvrvvvnarnlgstgksralnealravksdlvllv 94 
                      d++v++pt++++  +l++ l s+la+   ++e+ +v+++++ e  +++ +     l+++ +rv  + +   +  k+  + ea++ vk+ ++++ 
       KHJ33382.1  54 DVTVIIPTIHNNFeELRDPLQSILAC--QPFELLLVTTTDKYEKlINFTKS----LEATNIRVF-QVQ---IANKRKQVCEAIPKVKTSIIVMA 137
                      79********99779**********7..99*******88775551566655....777788965.445...35689999*************** PP

  Glyco_tranf_2_3  95 DdDtvvePdtlkrllqffltpkvgavgtpvflln.rstlvsal.....galefaerhlrflaarralg.vltlnGsgslirrevlkele..... 176
                      DdD+ + ++++++ll+ f+++++gavg ++++++ rs  +sal     ga ++++r+++++a++   g + +++G+++++r+e+lk +      
       KHJ33382.1 138 DDDVTWPKTIIPWLLAPFEDQRIGAVGPNQRVKRlRSGPLSALifnwlGAAYIERRNFEISATHGIDGgTSCMSGRTCAFRAEILKSPLflhgf 231
                      ********************************9746666555555555999*************999857************************ PP

  Glyco_tranf_2_3 177 ...gldp.lflltdDyelglrlrragfrtayvpgaavrevfp.sslkayikqrnRwvy 229
                         ++++   +  dD++++++l +++++t +++ ++++ +++ ++  ++  q+ Rw++
       KHJ33382.1 232 kneRWGRyHLNADDDNFITRWLVAHRWKTWIQYNKETEIETTlENNIKFLYQCSRWAR 289
                      ***9***999*********************9999999998856799999******86 PP

>> Glyco_transf_21  Glycosyl transferase family 21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.0   1.2e-09   7.3e-06      16     173 .]     116     289 ..     108     289 .. 0.71

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 1.2e-09
  Glyco_transf_21  16 npKvnnllqaleaakydllvisDsdvrvkpdyLeellaaledpkvglVtslpvgsdakg......laaaleaafl.ntlagvlqa.kl.sglgf 100
                       +K  ++  a++++k++++v++D+dv+ +++ +  lla++ed+++g V    ++ + ++      + + l aa++   +  + +     +g+++
       KHJ33382.1 116 ANKRKQVCEAIPKVKTSIIVMADDDVTWPKTIIPWLLAPFEDQRIGAVGPNQRVKRLRSgplsalIFNWLGAAYIeRRNFEISAThGIdGGTSC 209
                      5566678899999***********************************99999888776454444333334444432333333333234699** PP

  Glyco_transf_21 101 avGksmalrreaLea...iGGf..ealade.L.A.eDyalgkllraaGlkvvlspapiaqtsvpr..rsslrallaRqlrWar 173
                      + G ++a+r e+L++   + Gf  e ++++ L A +D +++++l a+ +k+++  +   +t++++  ++ + ++l +  rWar
       KHJ33382.1 210 MSGRTCAFRAEILKSplfLHGFknERWGRYhLnAdDDNFITRWLVAHRWKTWIQYNK--ETEIETtlENNI-KFLYQCSRWAR 289
                      **************94444555222333322344478999**********9999885..455554434333.48999999986 PP

>> Glycos_transf_2  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.0   8.9e-09   5.3e-05       1     167 [.      56     223 ..      56     224 .. 0.90

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 8.9e-09
                      EEEEEESS-.TTTHHHHHHHHHHHGGCCEEEEEEEEES-.SSCHHHHHGGGCHC-TTEEEEEESSS-HHHHHHHHHHHH--SSEEEEEESSEEE CS
  Glycos_transf_2   1 svviptyNe.ektlletlesllaqdpypdfeiivvDDgS.tDetveileelakedprvrvirreenvGkagalnaglraatgdyilflDaDdep 92 
                      +v+ipt     ++l+  l s+la    + fe+++v   +  +++ ++ ++l     ++rv++      k + + +++ ++++ +i+  D+D+++
       KHJ33382.1  56 TVIIPTIHNnFEELRDPLQSILAC---QPFELLLVTTTDkYEKLINFTKSLE--ATNIRVFQVQIA-NKRKQVCEAIPKVKTSIIVMADDDVTW 143
                      5899985555*************8...9999999999886677777777775..599999999999.9************************** PP

                      -TTHHHHHHHHHHH.TTCEEEEEEEEEECCCCCCCHC-SS.....EEEECCHCCCCHCCCCCCSTTCSTCCCEEEEHHHH CS
  Glycos_transf_2  93 dpdwleklvealekdgadvvlgqrprifgetdeiernkrv.....generlyfkerkrslkgnlsfeigsaallrreale 167
                      ++  ++ l++++e+ + ++v ++ ++++  +++ +   ++     + + r ++    + ++g++s+++g  +++r e+l+
       KHJ33382.1 144 PKTIIPWLLAPFEDQRIGAVGPNQRVKRLRSGPLSALIFNwlgaaYIERRNFEISATHGIDGGTSCMSGRTCAFRAEILK 223
                      **************999999999999999999999988889***99999999999999999**************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       575  (0.0320709); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.37
# Mc/sec: 3962.71
//
Query:       KHJ33383.1  [L=336]
Description: putative hydroxyisocaproate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-55  187.6   0.0    1.6e-55  187.2   0.0    1.1  1  2-Hacid_dh_C   D-isomer specific 2-hydroxyacid dehydrogenase,
    1.6e-17   63.4   0.0    2.9e-17   62.6   0.0    1.4  1  2-Hacid_dh     D-isomer specific 2-hydroxyacid dehydrogenase,
  ------ inclusion threshold ------
      0.092   12.9   0.1       0.25   11.5   0.0    1.7  2  NAD_binding_2  NAD binding domain of 6-phosphogluconate dehyd


Domain annotation for each model (and alignments):
>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.2   0.0   2.6e-59   1.6e-55       2     178 .]     121     295 ..     120     295 .. 0.96

  Alignments for each domain:
  == domain 1  score: 187.2 bits;  conditional E-value: 2.6e-59
                   HHHHHHHTTHHHHHHHHHTTCC.HTTCCGSBS-GTTSEEEEES-SHHHHHHHHHHHHTT-EEEEESSSHHHHHCHHHHTCEECSHHHHHHH-SEEEE CS
  2-Hacid_dh_C   2 alllallrrlaeadeevregew.ksekallgkelsgktvGiiGlGrIGqavakrlkafgmkviaydrskkkeeeeeelgvelvsleellaesDivsl 97 
                    l++ +lrr++  + +vr+gew   ++  +g++  gk +Gi+G+G IG+ va+r+kafg+++ +++rs+ + e   ++g+++vs+++l+++sDi+sl
    KHJ33383.1 121 FLMIGALRRIHLPYLAVRAGEWrGGSTFQPGHDPDGKLLGILGMGGIGRDVAHRAKAFGLRIQYHNRSQLPPE--LDQGASYVSFDQLIKTSDIISL 215
                   699*******************76677889**************************************99877..55699***************** PP

                   -S--STTTTTSBSHHHHHCSTTTEEEEESS-GGGB-HHHHHHHHHTTSCCEEEES--SSSSSGTCHHHHHSTTEEE-SS-T CS
  2-Hacid_dh_C  98 hlpltpetrhlinaeelakmkkgailiNtaRGglvdeeaLleaLksgkiagaalDvfeeeplpedspllelpnviltPHia 178
                   ++ lt et+++i++ee+++mkkg++l+NtaRG+l+de+aL++aL+sgk+  a+lDv+e+ep  ++ +ll+ p+v+l PH++
    KHJ33383.1 216 NCSLTRETEKIIGKEEFDAMKKGVVLVNTARGKLIDEAALVDALDSGKVYSAGLDVYENEPQIHK-KLLSNPHVMLLPHVG 295
                   ***************************************************************77.*************97 PP

>> 2-Hacid_dh  D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.6   0.0   4.9e-21   2.9e-17      49     129 ..      59     322 ..      11     326 .. 0.92

  Alignments for each domain:
  == domain 1  score: 62.6 bits;  conditional E-value: 4.9e-21
                 S......-BSHHHHHHH.TT--EEEESSSSCTTB-HHHHHHTT-EEEE-TTTTHHHHHHHH...................................... CS
                 x......xxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...................................... RF
  2-Hacid_dh  49 t......kvtaevleal.pkLkviaragvGvDnvDldaakerGilVtnvpgystesvAElt...................................... 102
                        +++ ++++ l  ++++i++ g+G+D +D++a+++rGi V+n+p++  +++A++t                                      
  KHJ33383.1  59 AssvltgPFDTKIISSLpRSVRFICHNGAGYDDIDVEACSARGIRVSNTPTAVNQATADMTiflmigalrrihlpylavragewrggstfqpghdpdgk 157
                 1344444799*******999******************************************************************************* PP

                 ................................................................................................... CS
                 ................................................................................................... RF
  2-Hacid_dh 103 ................................................................................................... 102
                                                                                                                    
  KHJ33383.1 158 llgilgmggigrdvahrakafglriqyhnrsqlppeldqgasyvsfdqliktsdiislncsltretekiigkeefdamkkgvvlvntargklideaalv 256
                 *************************************************************************************************** PP

                 .......................................T-BHHHHHHHHHHHHHHHHHHHTTCCG CS
                 .......................................xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  2-Hacid_dh 103 .......................................aaTeeaqeniaeeaaenlvaflkgesp 129
                                                          T e+ +++   +++n+++++k++s+
  KHJ33383.1 257 daldsgkvysagldvyenepqihkkllsnphvmllphvgTGTVETERKMELLVIKNIESAMKTGSL 322
                 **************************************999********************99875 PP

>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.87   5.2e+03      37      65 ..      96     126 ..      91     131 .. 0.61
   2 ?   11.5   0.0   4.1e-05      0.25       2      96 ..     159     251 ..     158     269 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.87
                    HHHHTTEEE-SSHHHHHHHC..SEEEE-SSS CS
  NAD_binding_2  37 elvaegakaaesieelvasl..dvvitmvka 65 
                    +  a+g+++ +++ ++ ++    ++++m+ a
     KHJ33383.1  96 ACSARGIRVSNTPTAVNQATadMTIFLMIGA 126
                    5556666666666655444466677777765 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 4.1e-05
                    EEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTTEEE-SSHHHHHHHCSEEEE-SSSHHHHHHHHHS.HCCC--TT-EEEE-S---HHH CS
  NAD_binding_2   2 igfiGlGvMGsnmalnllkagykvavynrtkekveelvaegakaaesieelvasldvvitmvkagkavdevieg.llealkkgdilidgstssped 96 
                    +g++G+G +G+  a + ++ g ++  +nr+  ++   +++ga  + s  +l+++ d++ +  + +++++++i +  ++a+kkg +l++++  +  d
     KHJ33383.1 159 LGILGMGGIGRDVAHRAKAFGLRIQYHNRS--QLPPELDQGA-SYVSFDQLIKTSDIISLNCSLTRETEKIIGKeEFDAMKKGVVLVNTARGKLID 251
                    699*************************99..5566678888.5567899*********************9988999999999999877655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2379.30
//
Query:       KHJ33384.1  [L=401]
Description: hypothetical protein EV44_g1977 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-24   84.8   0.2    8.7e-24   84.0   0.2    1.4  1  MUG113      Meiotically up-regulated gene 113
    4.5e-23   81.7   0.3    1.2e-22   80.4   0.3    1.7  1  T5orf172    T5orf172 domain
  ------ inclusion threshold ------
      0.045   13.6   0.5       0.43   10.4   0.1    2.4  2  zf-primase  Primase zinc finger


Domain annotation for each model (and alignments):
>> MUG113  Meiotically up-regulated gene 113
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.0   0.2   1.5e-27   8.7e-24       1      77 []     291     389 ..     291     389 .. 0.93

  Alignments for each domain:
  == domain 1  score: 84.0 bits;  conditional E-value: 1.5e-27
      MUG113   1 lKIGrTnnverRlnelnrqcpskltllryyppss...........pnahrlErllhleLkdkrlrdekcdc......EwFevpa.....eslkavirkw 77 
                 lKIGr++nv rR+n++n+qc ++l l+ryyp+++           pn++++Erl+h+e +++r + +kc+       EwFev+a     + + +vi++w
  KHJ33384.1 291 LKIGRAQNVYRRMNQWNKQCGYHLSLVRYYPYQPssshqklpttvPNVNKVERLIHIEIAHMRASFGKCGTcgkvhkEWFEVEAsqsavHAVDEVIKRW 389
                 7*****************************************************************777767************876666666678888 PP

>> T5orf172  T5orf172 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.4   0.3     2e-26   1.2e-22      11     103 .]     281     390 ..     273     390 .. 0.84

  Alignments for each domain:
  == domain 1  score: 80.4 bits;  conditional E-value: 2e-26
    T5orf172  11 sege...tillKIGrtsnvqrRlkelsk...........yptkppselevvaekevrkvpnahrvErlihkeLadrryrvkcdcgk...ehrEwFevs. 91 
                 ++++   tillKIGr++nv rR+++++k           yp++p+s+ + +       vpn+ +vErlih e a++r  +  +cg+    h+EwFev+ 
  KHJ33384.1 281 NHNNrkeTILLKIGRAQNVYRRMNQWNKqcgyhlslvryYPYQPSSSHQKLP----TTVPNVNKVERLIHIEIAHMRASFG-KCGTcgkVHKEWFEVEa 374
                 33334569***************************99988888888777554....579****************888884.3333558*******999 PP

    T5orf172  92 ....leevdevvrriv 103
                     ++ vdev++r+v
  KHJ33384.1 375 sqsaVHAVDEVIKRWV 390
                 9999***********6 PP

>> zf-primase  Primase zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   7.2e-05      0.43       8      34 ..      23      53 ..      18      63 .. 0.76
   2 ?    0.3   0.0      0.11   6.5e+02      28      36 ..     307     315 ..     302     319 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 7.2e-05
  zf-primase  8 lCkatkkdgkkCgswvnkr....kgeyCdfH 34
                +C++ + dgkkC++++ k     kg yC  H
  KHJ33384.1 23 TCQGLTTDGKKCRRPISKPipghKGGYCWQH 53
                7**************9986222134456666 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.11
  zf-primase  28 geyCdfHvq 36 
                  ++C +H++
  KHJ33384.1 307 NKQCGYHLS 315
                 579****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       717  (0.0399911); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3049.99
//
Query:       KHJ33385.1  [L=108]
Description: hypothetical protein EV44_g3642 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.034   13.6   0.0      0.061   12.7   0.0    1.5  1  HTH_Tnp_ISL3  Helix-turn-helix domain of transposase family I
      0.077   13.0   0.1       0.32   11.0   0.0    1.9  2  HTH_1         Bacterial regulatory helix-turn-helix protein, 


Domain annotation for each model (and alignments):
>> HTH_Tnp_ISL3  Helix-turn-helix domain of transposase family ISL3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   6.8e-06     0.061      28      46 ..      31      49 ..      15      54 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 6.8e-06
  HTH_Tnp_ISL3 28 rsvkavArqlgvSwtTVwr 46
                  + v+a+Ar + +S+ TVw 
    KHJ33385.1 31 KDVSAAARAYKLSEETVWE 49
                  679***************6 PP

>> HTH_1  Bacterial regulatory helix-turn-helix protein, lysR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.17   1.5e+03      23      39 ..      11      27 ..       9      29 .. 0.78
   2 ?   11.0   0.0   3.6e-05      0.32      15      38 ..      32      55 ..      29      59 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.17
                HTS-HHHHHHHHHHHHH CS
       HTH_1 23 LglsqpavsrqikrLEe 39
                L   q+a+ ++i +LE+
  KHJ33385.1 11 LEARQAAIEAAILDLEN 27
                55568999999999997 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 3.6e-05
                SHHHHHHHHTS-HHHHHHHHHHHH CS
       HTH_1 15 sftrAAeeLglsqpavsrqikrLE 38
                 +++AA++  ls  +v+ q+ +L 
  KHJ33385.1 32 DVSAAARAYKLSEETVWEQVIDLG 55
                689****************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1153  (0.0643092); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 873.34
//
Query:       KHJ33386.1  [L=1286]
Description: putative cyanobacterial phytochrome b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.2e-28   97.6   0.0    9.9e-28   96.7   0.0    1.4  1  PHY           Phytochrome region
    5.4e-19   68.8   0.3    1.6e-18   67.3   0.3    1.8  2  HATPase_c     Histidine kinase-, DNA gyrase B-, and HSP90-lik
    1.9e-15   57.0   0.0    1.2e-14   54.5   0.0    2.4  1  Response_reg  Response regulator receiver domain
    3.7e-11   42.9   0.2    9.3e-11   41.6   0.2    1.7  1  HisKA         His Kinase A (phospho-acceptor) domain
    2.9e-10   40.9   0.0    7.2e-10   39.6   0.0    1.7  1  GAF           GAF domain
    2.6e-09   37.7   0.0    7.7e-09   36.2   0.0    1.9  1  PAS_2         PAS fold
  ------ inclusion threshold ------
      0.025   14.4   0.0      0.071   12.9   0.0    1.8  1  HATPase_c_3   Histidine kinase-, DNA gyrase B-, and HSP90-lik
      0.088   13.1   0.0       0.32   11.3   0.0    1.9  1  PAS_9         PAS domain


Domain annotation for each model (and alignments):
>> PHY  Phytochrome region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.7   0.0   4.4e-31   9.9e-28       5     171 ..     516     684 ..     512     696 .. 0.94

  Alignments for each domain:
  == domain 1  score: 96.7 bits;  conditional E-value: 4.4e-31
                 HHHHHHHHHHSSSHHHHHTTTCCHHHHHTT-SEEEEEETTEEEEEESS--HHHHHHHHHHHHHTTTTSEEEESBCCCTSGGGG..CCCCCHSEEEEEEE CS
         PHY   5 eeklvealareedleeglvdespnlldlvkadGaalllegklltlGetPseeairkllqwlereseeevfstdsLseayPeaa..aladvasGllaisl 101
                  +kl +  a+++d+ e +++++++ll++ +a+   l ++g    +G + ++++   + +  e+++ + ++s++++  ++P+++     +v+ Gll+++l
  KHJ33386.1 516 TRKLFNTNATKKDTSEFVFASTDDLLKIFSAEFGLLSIQGVNKIIGSCKKQQEAFTVQKYFETRKVTSIISSQDIRSDFPDLKcpTGFEVITGLLVLPL 614
                 56888999999*********************************************************************876227789********** PP

                 SSTTTEEEEEEE-CEEEEEEEESSSGGCCCCCCTCCCCSHHCHHHCCCCCETTEBS---HHHHHHHHHHH CS
         PHY 102 sskeseyllWfRpevvqtvkWgGdpekaaeaddagsrlsPRkSFeawketvrgrslpWeeveleaarelr 171
                 s++ +++ll+fR+e+v +vkW+G+p ++ +++ + +++sPR+SF+ wke+v g+s+ W++  +eaa  l 
  KHJ33386.1 615 SASGNDFLLFFRKEQVLEVKWAGNPYDKITQHFDIDQISPRRSFKVWKEKVIGKSREWNDEQIEAAVTLC 684
                 ******************************9999********************************9886 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.3   0.3     7e-22   1.6e-18       1     110 [.     818     948 ..     818     950 .. 0.90
   2 ?   -3.0   0.0       4.5     1e+04      65      86 ..    1099    1120 ..    1083    1148 .. 0.74

  Alignments for each domain:
  == domain 1  score: 67.3 bits;  conditional E-value: 7e-22
                 EHHHHHHHHHHHHHHHHHHHHSTTTEEEEEEEEEE.....TEEEEEEEESSSSSTTHHHT....................GTCSTTCHHCSTCHTSTSS CS
   HATPase_c   1 gdekrLrqiisnlvdNavkfatkageieveikase.....ddlvisveDnGiGipkedlk....................klfekfsqddstkrggggt 74 
                 gd++rLrq+i nl+ N+++f t+ g +++++  ++      +++i +eD+G+Gi+ ++++                    klf++f     ++++ +  
  KHJ33386.1 818 GDQRRLRQAIFNLIANSMQF-TTHGFVWIQVLLKSdiiggARIEIMIEDSGCGISDQEIEemfrdldnviielnvpdenrKLFGNFLP---SRSENQKL 912
                 79******************.65666666555533467779***********************************************...5666789* PP

                 SHHHHHHHHHHHHTTTEEEEEEETTTEEEEEEEEES CS
   HATPase_c  75 GlGlsivkklvelmgGeiwvesepgrGttftftlpl 110
                 GlGl+ v ++v+ m+G+++++se+g+G++f++++++
  KHJ33386.1 913 GLGLATVLRIVRIMNGKLRIKSEKGKGSRFIIEVDF 948
                 ********************************9986 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 4.5
                  CSTCHTSTSSSHHHHHHHHHHH CS
   HATPase_c   65 dstkrggggtGlGlsivkklve 86  
                  ++++++++ + lG++i k+++ 
  KHJ33386.1 1099 SNESSNTSLEKLGFAIRKEVSP 1120
                  4577888999999999988765 PP

>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.0   5.2e-18   1.2e-14       1     111 [.    1129    1255 ..    1129    1256 .. 0.90

  Alignments for each domain:
  == domain 1  score: 54.5 bits;  conditional E-value: 5.2e-18
                    EEEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHH..ESEEEEESSCSSSEHHHHHHHHHHCTTT...............SEEEEEE CS
  Response_reg    1 vlivdDdplvrellrqlleeegyeevaeaedgkealellkeek..vdlillDinmpgmdGlellkeireedpe...............lpviilt 78  
                    vl+++Dd ++++++++ l ++g  +v+++ +g e+ + + e+k  +d+il+Di+mp +dG++ +k+ir  +++               +p+++++
    KHJ33386.1 1129 VLLAEDDFVNCKIIHKRLGKSGH-KVHQTVNGGECAKVYAEKKdlFDVILMDIQMPIVDGMKSTKMIRSFENNdpknvlskharsngrVPILAVS 1222
                    89*********************.999999999999988777779**********************998833344677788889999******* PP

                    SSTSHHHHHHHHHCTESEEEESSG-HHHHHHHH CS
  Response_reg   79 ahseeedavealkagaddflsKpfdpeeLlkal 111 
                    a   e+ ++ +++ g d+ ++Kp+d ++L + l
    KHJ33386.1 1223 ASLCEDKRQIYIDTGFDGWIMKPIDFKRLNTLL 1255
                    ***************************998765 PP

>> HisKA  His Kinase A (phospho-acceptor) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.2   4.1e-14   9.3e-11       5      67 .]     710     771 ..     707     771 .. 0.95

  Alignments for each domain:
  == domain 1  score: 41.6 bits;  conditional E-value: 4.1e-14
                 HHHHHHHHHHHHHHHHHHHHHHHHC..T-HSSCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH CS
       HisKA   5 flagvaHELrtPLsailgnaeaLkregklteelkeyletiesearrldhlvedlLdlsrieag 67 
                 +la+ aHELrtPL+ai+ ++e+ ++ ++l++e + +l +    ++ l  +++dlLdl++ e+g
  KHJ33386.1 710 LLANSAHELRTPLNAIINYLEIAME-APLDQETRHNLGQSCYASKSLIYVINDLLDLTKAEQG 771
                 89********************877.49*******************************9987 PP

>> GAF  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.6   0.0   3.2e-13   7.2e-10       3     110 ..     339     482 ..     337     505 .. 0.67

  Alignments for each domain:
  == domain 1  score: 39.6 bits;  conditional E-value: 3.2e-13
                 HHHHHHHHHHHHHHHTESEEEEEE..EEETT.EEE.....................CEEEEECCEEEET.....TSHHHH...........HHHHHSSS CS
         GAF   3 eelldtvveelrellgadrvalyl..pdydG.lhy.....................dipqasrwlfmkn.....grgicg...........qvlatgqp 61 
                 ++ +++++  ++el+g +rv++y+  ++y+G + +                     dip+++r l+++n          +             +  + +
  KHJ33386.1 339 DTFCRILAGIVKELTGFHRVMIYQfdASYNGrV-VsevldphvsrqcnlyfllrtsDIPPQARRLYQVNkvvvlY----DrenvtsrliyrSRADFKNS 432
                 799********************9996677740.234555666777777889999*9999999977777433220....23223333222233333344 PP

                 EEESTGGTSTTHHTT...HHHHHHHHTTESEEEEEEEEETTEEEEEEEEEE...S CS
         GAF  62 lvipdstpdprfaqy...nrrdllenmgirsslvvPlvndgelwGllvlhn...p 110
                 l ++       ++++    + ++l+nm +rss+++++ + ++lwGl+++h    +
  KHJ33386.1 433 LDLSY-----SYLRAispIHIKYLNNMAVRSSMSMSINSLNHLWGLIACHAygsK 482
                 44443.....233335556777999*************************95431 PP

>> PAS_2  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.0   3.4e-12   7.7e-09       1      67 [.     137     207 ..     137     259 .. 0.81

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 3.4e-12
                 HHC--CCC-SEE-TTSEEEEEETT...TTEEEEEETTHHHHCSS-CCCCTTTC.CCCCSECTTHHHHCCHS CS
       PAS_2   1 aylekIqrggliQPfGcllavdek...slrvlqvSeNaaemLglteekllgtd.lralltassaalLekal 67 
                 ++ e+I+ +++iQ+fG+l+a++e+   +l++l vSeN +e+ g ++++l++ d + ++l +++++ L + +
  KHJ33386.1 137 CEDEPIHAPEAIQSFGALIALKESqsrKLMILIVSENSNEIIGYSPQELFQLDcFTDILAEQNVDILMDRI 207
                 899******************998666799***************99997766346667677666666554 PP

>> HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.2e-05     0.071       4      55 ..     824     880 ..     821     888 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.2e-05
  HATPase_c_3   4 ekAlaelvdNsldAdaen...vkievnknr..gktgeivieDdGkGmseeelknalr 55 
                  ++A++ l+ Ns++   +    +++ ++ +   g+  ei ieD G G+s +e+++++r
   KHJ33386.1 824 RQAIFNLIANSMQFTTHGfvwIQVLLKSDIigGARIEIMIEDSGCGISDQEIEEMFR 880
                  689**********77776766666666655657889*****************9986 PP

>> PAS_9  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00014      0.32      11      60 ..     165     221 ..     154     253 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00014
       PAS_9  11 grilyaNeaalrllGyspeevlgksitdlfvtdpeanerlraaleqgrk........k 60 
                  +il ++e  ++++Gysp+e+ + ++++ +  ++++ + l + ++  r+        +
  KHJ33386.1 165 LMILIVSENSNEIIGYSPQELFQLDCFTDI-LAEQNVDILMDRIKLTRNaditdygpE 221
                 5899*********************99888.788888888888887775555555441 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       716  (0.0399353); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.77u 0.23s 00:00:01.00 Elapsed: 00:00:00.37
# Mc/sec: 10391.58
//
Query:       KHJ33387.1  [L=674]
Description: putative transmembrane amino acid transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-59  200.3  28.4    4.9e-59  200.1  28.4    1.1  1  Aa_trans  Transmembrane amino acid transporter protein


Domain annotation for each model (and alignments):
>> Aa_trans  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.1  28.4   2.7e-63   4.9e-59       2     408 ..     269     666 ..     268     667 .. 0.90

  Alignments for each domain:
  == domain 1  score: 200.1 bits;  conditional E-value: 2.7e-63
    Aa_trans   2 tssalsavlnlikaivGaGvLaLPyAfkqlGlivGlillllvallslytlllLvkcsktlasgkrnksYgdlgyrllGpkgkliidlailvqlfGvgvs 100
                 +s+  ++++n ++  +G G+L+LP  fk +G+i+G+++l l+al++++t+ lL+kc +    +++  +++d++   +G+k++ +++l+++++l+ ++v+
  KHJ33387.1 269 QSTLPQTIFNSTNVLIGIGILSLPLGFKYAGWIPGILILSLAALITSLTAKLLAKCIDL---DPSLITFADIALISYGEKARNLTSLLFTLELVAACVG 364
                 68899*****************************************************5...69*********************************** PP

    Aa_trans 101 yliligdllpaifesffdtlllsnvyfilisaliiipLslipnlskLsylSllalvsslyyivilvlvvaelvklelkgvseetv.....kkasklkgl 194
                  +il++d+l+ ++++      +  + + +  +lii+pL+++p l+ Ls++S+++++s +++  +l++++  ++k +  g  +e++      +  +  ++
  KHJ33387.1 365 SIILFADTLNFLIPG------VGVLGWKVLCGLIIMPLNFLP-LRLLSFTSFIGIFSCICI--VLSIIIDGIIKPNSPGSLREPAktylfPE--NWNTI 452
                 **************9......699*****************9.9**************985..44444444444444444444443332344..44599 PP

    Aa_trans 195 flaigiivFAftghavlleiqnelkdpskfkkmtkvlllsiilatvlyilvGlvGYltFGnevkgnillnlpkss....ilivivnlllvlhlilsfpl 289
                 fl++g ++  ++gh ++++i+ ++++p k++   +++ ++++++++l +l+++ G l+FGn v  +i  n  ++     ++ v+   ++++  i+ +pl
  KHJ33387.1 453 FLSLGLFMSPWGGHSIFPNIYRDMRHPHKYT---RAVRITFTFTYFLDLLAAVPGILMFGNGVTNEISANILNTPgyprFFSVFLSTAIAIIPITKIPL 548
                 *****************************88...9********************************99999988999********************* PP

    Aa_trans 290 qlhplrqvvenllikkeavagasekeapkskll....rlvirlllvvityliAlsvpslakvlslvGatsstplsfilPalfhlkliktekksleklvk 384
                 + +pl++ ve l   k   ++ s+ +++ s l     +  +r++l+++++li++++p+++ ++++ G+ ++t++++ilP +f+lkl+++e+   +k+  
  KHJ33387.1 549 NSSPLISTVESLTGLKASTKCGSDVHPTISPLTkdllKASTRVALIILFVLISVLFPNFDTIVGFMGSALCTTICVILPLIFYLKLFGNEISMKQKI-- 645
                 **************9966777777777665443444499***************************************************9555555.. PP

    Aa_trans 385 kkildlicivlglllvfyglavli 408
                    + ++ i ++ ++++ g+++++
  KHJ33387.1 646 ---FYYCLIAISTAVAISGTIAAF 666
                 ...4689***********999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (674 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       746  (0.0416086); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.38
# Mc/sec: 5285.92
//
Query:       KHJ33388.1  [L=698]
Description: putative chitin deacetylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-15   56.5   0.0    4.8e-15   55.6   0.0    1.4  1  Polysacc_deac_1  Polysaccharide deacetylase


Domain annotation for each model (and alignments):
>> Polysacc_deac_1  Polysaccharide deacetylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.6   0.0   2.7e-19   4.8e-15       7     118 ..     497     613 ..     493     615 .. 0.90

  Alignments for each domain:
  == domain 1  score: 55.6 bits;  conditional E-value: 2.7e-19
                      TEEEEEEEESSCSCHHHHHHHHHHCT--EEEEE-HHH....HCH-HHHHHHHHHTTEEEEE--SS--EGGGSHHH.HHHHHHHHHHHHHHHHHS CS
  Polysacc_deac_1   7 ksvalTfDdgprdntteilpvLkkykvkatffviggl....vedypdevremaasGveignHtinhsnlkrlsee.evrreierakdalrkalg 95 
                      +s a   Ddg +++ ++++++  + ++k tff +g        ++    + m ++G++++ H+++h+ ++ l +   ++ ei++  +a++++lg
       KHJ33388.1 497 NSFAFAIDDGDPKFAQRVVSTISEAGIKVTFFTVGAAlrdtSTNLTGVYKGMLDAGHQVAYHSFTHPPMEGLPSLaAIDWEINQDMQAVQEKLG 590
                      6677889*****************************8455444449999********************999876599**************** PP

                      ----EEE-GGGEE-HHHHHHHHH CS
  Polysacc_deac_1  96 reprlfryPygsasatvlevare 118
                        +++fr+P+g   a+v++ +++
       KHJ33388.1 591 IASKYFRPPFGTEGARVRQRLQS 613
                      ****************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (698 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       307  (0.0171231); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.22s 00:00:00.77 Elapsed: 00:00:00.38
# Mc/sec: 5528.55
//
Query:       KHJ33389.1  [L=720]
Description: hypothetical protein EV44_g2986 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.9e-25   87.2   7.1    9.9e-25   87.2   7.1    2.7  3  Uds1      Up-regulated During Septation


Domain annotation for each model (and alignments):
>> Uds1  Up-regulated During Septation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.9      0.32   5.7e+03      64      91 ..      60      89 ..      55     110 .. 0.43
   2 ?   -2.6   1.4      0.33   5.9e+03      50      67 ..     383     400 ..     344     441 .. 0.57
   3 !   87.2   7.1   5.5e-29   9.9e-25       3     127 ..     476     591 ..     474     594 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.32
        Uds1 64 skksak..ssaarsnskssreslakaeeel 91
                s+k+++  +++++sn+ + + +++++ ee 
  KHJ33389.1 60 SNKNKHpiKKQNSSNELQVNLNEEQKSEET 89
                333333332222233333222333333332 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.33
        Uds1  50 lrdaarsLsrlyssskks 67 
                 +r++ + +s+l+s+++ s
  KHJ33389.1 383 VRHSSEDISELKSDDRGS 400
                 344444444444333333 PP

  == domain 3  score: 87.2 bits;  conditional E-value: 5.5e-29
        Uds1   3 lLvetAlvdsqefeiLsleeVeelkkelkaLeerlealrkkLaletklrdaarsLsrlyssskksakssaarsnskssreslakaeeelaeserkvdel 101
                  L+++Al ++ +fe+Ls  +V++l+kel+aL+er+e lrk+   +++lr+ ++sL+++ +s++++      ++ +++s e l+k e +l+e++r +d+ 
  KHJ33389.1 476 HLQNQALSQAFRFEVLSSRDVASLSKELRALDERCEFLRKT---HHSLRNDRQSLHARLCSNLRN------QRVGRFSCEVLLKLEVNLSELDRCIDAC 565
                 699**************************************...*********************......78999999******************** PP

        Uds1 102 aselekleeraaevrrrLLeHtAavL 127
                  s++e +e+r++++r++LLeH+Aa+ 
  KHJ33389.1 566 VSKFELAENRRMRLRQKLLEHVAAAA 591
                 ***********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (720 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1041  (0.0580624); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4950.91
//
Query:       KHJ33390.1  [L=246]
Description: hypothetical protein EV44_g3291 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       785  (0.0437838); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1809.27
//
Query:       KHJ33391.1  [L=226]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.11   12.5   0.0       0.17   11.8   0.0    1.3  1  Peptidase_C3    3C cysteine protease (picornain 3C)
       0.11   12.0   0.0        1.6    8.2   0.0    2.2  2  Glycoprotein_B  Herpesvirus Glycoprotein B ectodomain


Domain annotation for each model (and alignments):
>> Peptidase_C3  3C cysteine protease (picornain 3C)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.9e-05      0.17      66     128 ..      40     102 ..      29     110 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.9e-05
                   E-TT--EEEEEEEEESSS--B---GGGS-SS---EEEEEEEE-SSSSTTEEEEEEEEEEEEEE CS
  Peptidase_C3  66 vdqegmpldlaivklkrgekfkdirkylaarikkgkpvvllinnneagrlivsveavtakgki 128
                     q g ++ l   + +r ek kd +k++++     k+    in+++ ++++ s +a++ k  +
    KHJ33391.1  40 TSQSGINSCLGYSRTQRSEKGKDKSKHYSTSGAMDKTSHRSINKDKSENTTSSTKAISDKKLL 102
                   5677888888888899*************88888999999*****************988766 PP

>> Glycoprotein_B  Herpesvirus Glycoprotein B ectodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.023     2e+02      41      87 ..     109     156 ..     103     161 .. 0.81
   2 ?    8.2   0.0   0.00017       1.6      68     102 ..     182     216 ..     167     225 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.023
                     HHHHTT-HHHHHHHHHTS.---EEEETTEEEE---EE--SSSEEE-S- CS
  Glycoprotein_B  41 kelskinPssvlsaiygr.avaakllGDvlavskCvevdqesvklqks 87 
                     +e +k++P+sv   ++++  +++ l+G +  v +  ++  ++ + +++
      KHJ33391.1 109 HEWRKLSPASVRRVMVKKlYISSSLVGKIKPVHSSFALSPSNSEAREE 156
                     7899********999988459999999998888887777776666655 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00017
                     EEEE---EE--SSSEEE-S------------SS-E CS
  Glycoprotein_B  68 vlavskCvevdqesvklqksmrvseseklCYsRPl 102
                     vl+v   ++++q +v++ ksm   e + +C +RP 
      KHJ33391.1 182 VLTVPAFIQIEQGKVEVSKSMLSDEIKRVCSVRPA 216
                     7899999***************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       758  (0.0422779); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1731.32
//
Query:       KHJ33392.1  [L=649]
Description: putative pheromone processing carboxypeptidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   9.7e-113  377.7   0.0   1.3e-112  377.3   0.0    1.1  1  Peptidase_S10  Serine carboxypeptidase


Domain annotation for each model (and alignments):
>> Peptidase_S10  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  377.3   0.0    7e-117  1.3e-112       5     417 ..      48     468 ..      44     469 .. 0.90

  Alignments for each domain:
  == domain 1  score: 377.3 bits;  conditional E-value: 7e-117
                    ST-SSEEEEEEEECSTTTTEEEEEEEEE-SSGTTTS-EEEEE--TTTB-THHHHHHTTSSEEEE.TTTTSEEEE-TT-GGGCSEEEEE--STTSTT CS
  Peptidase_S10   5 etvnfkqysGYldveeeedkslFYwfveseknpeedplvlWLnGGPGCsSldGlleElGPfrvn.kdstkkleenpysWnkvanvlfldqPvGvGF 99 
                      +  k+++G+++v  e+ ++lF+w++++++  +++ lv+WLnGGPGCsS dG+l+E+GP+rv+ ++++++le+n  sW++ +n++f+d+P+G+GF
     KHJ33392.1  48 SGPLLKMHAGHIEVLPEHHSNLFFWLFQNRHIANKQRLVIWLNGGPGCSSEDGALMEIGPYRVRtTSDGQHLEYNDGSWDEFSNLMFVDNPIGTGF 143
                    456689*********************************************************96444699************************* PP

                    -EETTSSGS--SHHHHHHHHHHHHHHHHHHSTCGTTSEEEEEEETTHHHHHHHHHHHHHTHCCH--SSTSEEEEEEEESE-SBHHHHHCCHHHHHH CS
  Peptidase_S10 100 SysntksdvktddeevaedlyefLkkffekfpeyksrdfyitGESYaGhyvPalakeilkknkkekkkkinLkGlligNglideaeqvnsyvefay 195
                    Sy++t+s + ++ +e+a+++++fL+++f+ fp+++++d+y++GES+aG+ +P++ak+il++nk+  ++k  LkG+ligNg+i ++eq+++y+ +ay
     KHJ33392.1 144 SYTDTDS-YVHGLTEMASQFLTFLESWFKLFPQFEQDDIYLAGESFAGQHIPYIAKAILDRNKAA-NQKWGLKGMLIGNGWIAPEEQYKAYLAYAY 237
                    ****977.58****************************************************995.89**************************** PP

                    HTTSSH.HHHH.HHHHHHHEET...........HHHHHHHHHHHHHHHHHHHHH....HHHHCHCEETTETTSEETTSSEEHHHCTTCCCCTTTTT CS
  Peptidase_S10 196 ehglis.eeey.eslkkacekk...........eeleqesekcanllekaskva....vekenkglnvynileeccklkaelkksstdaqggedpy 274
                    e+g+++ ++e+ ++++++   +            + + ++++c++ l+k+ + +     + e ++ln+y+++ ++          + +++g+++p 
     KHJ33392.1 238 ERGIVErDSEIaKKIESQ---QaiclkelneegGKDRVDIKSCEEILQKILRATqttgPDGELQCLNMYDVRLRD----------TFPSCGMNWPP 320
                    *****9433330333322...2455777988884455567778877777777545555555666***********..........6799******* PP

                    CHHHHHHHHTSHHHHHHTT--.TTSSS--SB-HHHHHHCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-STT-HHHHHHHHHHTECTTECCSCCCE CS
  Peptidase_S10 275 desyvekylnkkeVrkalhvn.asvkkweecndsvfeqleddisksveeileellesglrvliynGdvDlicnvlgteawikklelsgkkefrpwe 369
                    d s+v++yl +k+V +alh++ ++   w+ecn +v ++ +++ sk++++il++l+++ +++++++G  D+icn +gte++i++++++g k+f+   
     KHJ33392.1 321 DLSSVTTYLRRKDVIEALHIDpQKRTGWKECNGDVGSAFKKTNSKPSIQILPQLIAE-IPIVLFSGYEDMICNHIGTEELISNMQWNGGKGFELSA 415
                    *********************9999**********888888999*************.*********************************98766 PP

                    EEE.....TTTCESEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHHHHHH CS
  Peptidase_S10 370 vsp.....kkengqvaGyvkeyenltfltvkgaGHmvPedkpeealqllerfi 417
                     +      ++ +g+ aG+++e +nlt++  ++++HmvP+d ++++ ++l+rf+
     KHJ33392.1 416 GTWaprrdWEFEGKPAGFWQEARNLTYVLFYNSSHMVPFDFARRTRDMLDRFM 468
                    65566778*******************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 4797.29
//
Query:       KHJ33393.1  [L=107]
Description: putative duf431 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.5e-27   94.4   0.0    7.7e-27   94.2   0.0    1.0  1  RNA_Me_trans  Predicted SAM-dependent RNA methyltransferase


Domain annotation for each model (and alignments):
>> RNA_Me_trans  Predicted SAM-dependent RNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.2   0.0   4.3e-31   7.7e-27       1     104 [.       5     104 ..       5     106 .. 0.93

  Alignments for each domain:
  == domain 1  score: 94.2 bits;  conditional E-value: 4.3e-31
  RNA_Me_trans   1 kyviEhleeelseWvllEYrhiakevgaen..liltslskasleslpeelkslaklelekesveellkelkevkkekvclLDpkaekelspedaeef 95 
                   ky++Ehl++el +W++lEY +iake++++   ++l+s++  sl  lp+ l++++ +++ ++sve + ++    +kekvclLDp+a+k+l+ped++++
    KHJ33393.1   5 KYIVEHLDHELGPWSELEYLTIAKECHEAGdlFCLSSVPI-SLV-LPDYLENTPGFTADNRSVEIMHAT----DKEKVCLLDPSAPKQLQPEDGDAY 95 
                   69*************************99557*******9.677.9*****************655544....69********************** PP

  RNA_Me_trans  96 dvflfGGIl 104
                   +vflfGGIl
    KHJ33393.1  96 NVFLFGGIL 104
                   ********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       198  (0.0110436); expected 358.6 (0.02)
Passed bias filter:                      196  (0.010932); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.21s 00:00:00.55 Elapsed: 00:00:00.35
# Mc/sec: 904.08
//
Query:       KHJ33394.1  [L=203]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1645.68
//
Query:       KHJ33395.1  [L=413]
Description: putative dtdp-d-glucose -dehydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-70  237.4   0.0    3.1e-70  237.2   0.0    1.0  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
    5.2e-57  193.1   0.1    7.5e-57  192.6   0.1    1.2  1  Epimerase        NAD dependent epimerase/dehydratase family
    8.5e-22   77.6   0.0    8.4e-21   74.4   0.0    2.0  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
    2.2e-19   69.6   0.0    2.8e-19   69.2   0.0    1.1  1  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
      3e-19   69.2   0.0    4.1e-19   68.8   0.0    1.1  1  RmlD_sub_bind    RmlD substrate binding domain
    4.8e-18   65.3   0.3    4.8e-17   62.0   0.3    2.0  1  NAD_binding_4    Male sterility protein
    4.8e-05   23.3   0.0    8.2e-05   22.6   0.0    1.3  1  NAD_binding_10   NAD(P)H-binding
     0.0046   16.4   0.0        1.9    7.9   0.1    2.3  2  adh_short        short chain dehydrogenase
  ------ inclusion threshold ------
      0.017   15.0   0.0      0.031   14.2   0.0    1.4  1  KR               KR domain


Domain annotation for each model (and alignments):
>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.2   0.0   1.5e-73   3.1e-70       1     330 [.      57     365 ..      57     367 .. 0.90

  Alignments for each domain:
  == domain 1  score: 237.2 bits;  conditional E-value: 1.5e-73
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHTTSHH CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklhkgDltDssslerllaevqpdevynLAAqshVdvsfekPe 96 
                    LiTG+aGfi  +la++L   + + ++iv  +++ + +++++ +     ++++n+++++gD+t+ s++ + l+++++d+++++AAqshVd sf ++ 
     KHJ33395.1  57 LITGGAGFIACWLARHLTLTYADSYNIVSFDKLDYCSTLNNTRA---LNNKRNFNFYHGDITNPSEVMDCLEQYNIDTIFHFAAQSHVDLSFGNSY 149
                    9***********************************99999875...45679******************************************** PP

                    HHHHHHTHHHHHHHHHHHHCT..TTSEEEEEEEGGGG-S-S..SSSB-TTS-----SHHHHHHHHHHHHHHHHHHHH---EEEEEE-EEESTTS-T CS
  GDP_Man_Dehyd  97 ytaevnvlGtlrLLeairalglekkvrfyqaStsEvYGkvq..evpqtEttpfyPrsPYaaaKlyadwivvnyreayglfavngilfnhesprrge 190
                    +++ +nv Gt+ LLe ++++g++   +f+++St+EvYG+v+  e    Ett + P++PYaa+K++a+++v++y+++++l++++ +  n ++p++  
     KHJ33395.1 150 AFTHTNVYGTHVLLESAKKIGIK---KFIHISTDEVYGEVRddEDDLLETTILAPTNPYAASKAAAEMLVHSYQKSFKLPVIIVRSNNVYGPHQ-- 240
                    *********************96...9*************83355578*********************************************6.. PP

                    TSCCCHHHHHHHHHHTTS-C-EECTTTT-EEEEEEHHHHHHHHHHHHHCSS---EEE-TT-EEECHHCHHCCHHCCCHHHHHH............T CS
  GDP_Man_Dehyd 191 tfvtrkitravarialgkqevlylGnldakRdwghvkDyveamwlmlqqdkpedyviatgethsvrefvelaflelgktiewegkgeeevgrakes 286
                     ++++ i+++    ++ +q+v+  G++ ++R ++++ D ++a++++l++++         + ++v+++ e+++++l  ++ ++ +     +  + s
     KHJ33395.1 241 -YPEKIIPKFS-LLLHRRQPVVLHGDGTPTRRYLFAGDAADAFDTILHKGS-------MDQIYNVGSCDEISNMDLCFKLLKHFDI---PH--TTS 322
                    .7777776665.567778899999*************************98.......6899*************98877654322...22..233 PP

                    TGGCCCEECGG--SS--SB--B-THHHHHHH----SS-HHHHHH CS
  GDP_Man_Dehyd 287 gkvvvevdpkyfrpgevdlllgdaskakeeLgWkpkvsfeelvr 330
                    ++ +  ++  ++rp ++++++ d +k++ +LgW++k+sf e+++
     KHJ33395.1 323 EQLQKWIKHTHDRPFNDHRYAVDGTKLR-KLGWEQKTSFSEGLS 365
                    4444568889*****************9.9***********986 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.6   0.1   3.8e-60   7.5e-57       1     241 []      56     297 ..      56     297 .. 0.96

  Alignments for each domain:
  == domain 1  score: 192.6 bits;  conditional E-value: 3.8e-60
                 EEEETTTSHHHHHHHHHHHHCT...SEEEEEES-STTTTCHHCHHC......EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekg...yevigldrlssasntarledl......elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfiek 90 
                 il+tG++Gfi   l+++l       y+++ +d+l + s  ++ + l      +++++d+t++s++ + ++++++d+++h+Aa+++v+ s+ +  +f ++
  KHJ33395.1  56 ILITGGAGFIACWLARHLTLTYadsYNIVSFDKLDYCSTLNNTRALnnkrnfNFYHGDITNPSEVMDCLEQYNIDTIFHFAAQSHVDLSFGNSYAFTHT 154
                 8****************98776778*************99999999***************************************************** PP

                 HTHHHHHHHHHHHHHTCTEEEEEEEGGGGTSCSSSSBSTCSTTS--.--SSHHHHHHHHHHHHHHHHHHHHT-EEEEEEESEEESTTS-TTSTTSHHHH CS
   Epimerase  91 nlqgtlnlleaarkagvkrllflsSsevYGkdaeqpkeettltgpl.kpnspYaaaKlageklveayaaqyglnaiilrlfnlyGprngegevsrvipa 188
                 n+ gt  lle a+k g+k+++++s++evYG++ +  +e+++l++ + +p++pYaa+K+a+e lv++y+++++l++ii+r  n+yGp+   + ++++ip+
  KHJ33395.1 155 NVYGTHVLLESAKKIGIKKFIHISTDEVYGEVRD--DEDDLLETTIlAPTNPYAASKAAAEMLVHSYQKSFKLPVIIVRSNNVYGPH---QYPEKIIPK 248
                 **********************************..78888777778****************************************...88******* PP

                 HHHHHHTTSSSEEEETTST-EEEEEEHHHHHHHHHHHHHHHTT-STTEEEEES CS
   Epimerase 189 lirkilegkqevtllgdgtalRdflyveDvaeaillvlehvdagdkgeiyniG 241
                 +   +++++ +v+l gdgt+ R +l++ D+a+a+ ++l +   g   +iyn+G
  KHJ33395.1 249 FSLLLHRRQ-PVVLHGDGTPTRRYLFAGDAADAFDTILHK---GSMDQIYNVG 297
                 ********9.******************************...77788****9 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.4   0.0   4.2e-24   8.4e-21       1     226 [.      56     294 ..      56     332 .. 0.78

  Alignments for each domain:
  == domain 1  score: 74.4 bits;  conditional E-value: 4.2e-24
                      EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT..T-SEEEE------HHHHH CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleelkvdvvfhaAAlKhVPlve 94 
                      +l+tG++G i   l r+++ + + +  +++ d l   +  +++++  +k++++++     gd+++ +++ ++le++++d++fh AA  hV l  
       KHJ33395.1  56 ILITGGAGFIACWLARHLTLTYADSYNIVSFDKLDYCSTLNNTRALNNKRNFNFY----HGDITNPSEVMDCLEQYNIDTIFHFAAQSHVDLSF 145
                      89****************9998888888888888877777777666666666666....9********************************** PP

                      HSHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEGGG................SS--SHHHHHHHHHHHHHHHGGG--SSS--EEEEEEE-EET CS
  Polysacc_synt_2  95 enpleaiktNvlgtenvieaaieagvkkvvliStDKA................vnPtnvmGatKrlaekllqalakeseekktkfvvvRfGNVl 172
                       n +   +tNv+gt+ ++e a++ g+kk++ iStD                    Ptn + a+K++ae+l+ +++k+    k  +++vR  NV 
       KHJ33395.1 146 GNSYAFTHTNVYGTHVLLESAKKIGIKKFIHISTDEVygevrddeddllettiLAPTNPYAASKAAAEMLVHSYQKSF---KLPVIIVRSNNVY 236
                      ***********************************86333333333333333257*****************999988...899********** PP

                      TGT...TSSHHHHHHHHHTTSSEEES.-TT-EEEEE-HHHHHHHHHHHHHH--SS-EE CS
  Polysacc_synt_2 173 gSr...GSviplFkkqikeggpvtvT.dpemtRyfmtieeavqLvlqalalakggeif 226
                      g +     +ip+F   +++ +pv +  d + tR ++   +a++   + l++++  +i+
       KHJ33395.1 237 GPHqypEKIIPKFSLLLHRRQPVVLHgDGTPTRRYLFAGDAADAFDTILHKGSMDQIY 294
                      987333579****999999999987424455665555555555555555555555555 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.0   1.4e-22   2.8e-19       1     224 [.      57     280 ..      57     292 .. 0.83

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 1.4e-22
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrlee.lkevrvlDlrespelleelskvnvkk...viegDvtdkdkleealeg..vdvvihlaslvdvagkl.tedeimkvn 92 
                 ++tGgaGF+   l ++L  +     ++ ++D+ +  ++l++++ +n+k    + +gD+t+ +++ + le+  +d ++h a+ + v   + ++  + + n
  KHJ33395.1  57 LITGGAGFIACWLARHLTLTYAdSYNIVSFDKLDYCSTLNNTRALNNKRnfnFYHGDITNPSEVMDCLEQynIDTIFHFAAQSHVDLSFgNSYAFTHTN 155
                 69**************965544499*********99999****99999889999**************9633678****999999875415557889** PP

   3Beta_HSD  93 vkGTrnvleacvkagvrvlvYtSsaevvgpnslgeeilngdEeleyesl...hqdaypesKalaEklvlkaNgrtlknggrlyTcaLRpagiyGegd.. 186
                 v+GT+ +le+++k g++++++ S+ ev g+      ++  dE+  +e++   ++++y+ sKa aE lv +          +l  + +R+  +yG+ +  
  KHJ33395.1 156 VYGTHVLLESAKKIGIKKFIHISTDEVYGE------VR-DDEDDLLETTilaPTNPYAASKAAAEMLVHSYQK-----SFKLPVIIVRSNNVYGPHQyp 242
                 *****************************9......33.455555444444699************9987766.....347889**********97633 PP

   3Beta_HSD 187 kllvpllkqlaklglalfkigdeevlsdrvYvgNvawa 224
                 +++ p +  l++ ++ ++  gd   +  + ++g  a+a
  KHJ33395.1 243 EKIIPKFSLLLHRRQPVVLHGDGTPTRRYLFAGDAADA 280
                 67788888888888888888888777777777777665 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.8   0.0   2.1e-22   4.1e-19       2     279 ..      55     365 ..      54     372 .. 0.84

  Alignments for each domain:
  == domain 1  score: 68.8 bits;  conditional E-value: 2.1e-22
                    EEEEESTTSHHHHHHHHHCTT...TSEEEEEE-TT.....................T--TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHH CS
  RmlD_sub_bind   2 kilvtGanGqlGseLakqlae...eglevlaltre.....................eldltdaeavaellkeakpdvvvnaAAytavDkaEseeea 73 
                    +il+tG+ G ++  La+ l+    + ++++++++                      + d+t++++v+++l++ + d + + AA   vD    ++ a
     KHJ33395.1  55 NILITGGAGFIACWLARHLTLtyaDSYNIVSFDKLdycstlnntralnnkrnfnfyHGDITNPSEVMDCLEQYNIDTIFHFAAQSHVDLSFGNSYA 150
                    69999***999999999887522256667777666999999999**************************************************** PP

                    HHHHHTHHHHHHHHHHHHCT-.EEEEEEEGGGS-S-..TTS-B-TTS----SSHHHHHHHHHHHHHHHH-S....SEEEEEE-SEESS..SSS-HH CS
  RmlD_sub_bind  74 ayavnaeavealAeaaaavga.lLihvStDyVFdGe..kkrpYeeddetsPlnvYGrtKlaGEqavlaagk....kalivRtswvyge..kgknfv 160
                      + n+ +++ l e a+++g+ ++ih+StD V+      ++   e+   +P n Y+++K+a E  v +++k     ++ivR   vyg   + +  +
     KHJ33395.1 151 FTHTNVYGTHVLLESAKKIGIkKFIHISTDEVYGEVrdDEDDLLETTILAPTNPYAASKAAAEMLVHSYQKsfklPVIIVRSNNVYGPhqYPEKII 246
                    ********************945**********8764455569************************97662222579********8755889999 PP

                    HHHHHHHHH-SEEEEESS-EE--EEHHHHHHHHHHHHHHCHH.GGG-EEEE---BS-EEHHHHHHHHHHHHCHTT...SEEEEE-CCCS--SS--- CS
  RmlD_sub_bind 161 ktmlrlakereelkvvaDqlgsPTsardlAevllqllekaaeekelagvyHlanegetswlefArailkeagads...eevkpistaeyptpAkRP 253
                     ++  l+++r+++ +  D  g+PT     A   +++ ++++++ ++ ++y +++ +e+s +++  + lk+++  +   e+++   ++   +p +  
     KHJ33395.1 247 PKFSLLLHRRQPVVLHGD--GTPTRRYLFAGDAADAFDTILHKGSMDQIYNVGSCDEISNMDLCFKLLKHFDIPHttsEQLQKWIKHTHDRPFNDH 340
                    999999999999888777..9***********************************************9999877555566655555555555555 PP

                    SBE-B--HHHHHCCT----BHHHHHH CS
  RmlD_sub_bind 254 anSvLdtekleatfgiklrewrealk 279
                    +++  d +kl++ +  + +++ e+l 
     KHJ33395.1 341 RYA-VDGTKLRKLGWEQKTSFSEGLS 365
                    554.4777777777777777777665 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.0   0.3   2.4e-20   4.8e-17      59     208 ..     104     237 ..      58     259 .. 0.79

  Alignments for each domain:
  == domain 1  score: 62.0 bits;  conditional E-value: 2.4e-20
                    TTTEEEEE--TTSGGGG--HHHHHHH.HHH--EEEE--SS-S.STTSSE...EHHHHHHHHHHHHHHHTSSS--.-EEEEEEGGGTTS-TTT--SS CS
  NAD_binding_4  59 aerikvveGDlseprlGLseedlqel.aeevdviihsaAtvnfdepyke...llrvNveGtrevlelakklkklkvllhvSTayvngeregeveek 150
                    +++  +++GD+++p      e ++ l + ++d i+h aA+ ++d +  +   +  +Nv Gt+ +le akk+  +  ++h+ST  v+ge ++     
     KHJ33395.1 104 KRNFNFYHGDITNPS-----EVMDCLeQYNIDTIFHFAAQSHVDLSFGNsyaFTHTNVYGTHVLLESAKKIGIK-KFIHISTDEVYGEVRDD---- 189
                    556667777777776.....33334435689*************98877444778****************999.*******8888888854.... PP

                    S-H......HHH--EEEETTTCCCHHHHHHHHHHHHHHHHHHHH---EEEEEE-EEE- CS
  NAD_binding_4 151 vyeegekeekldederaklkglpntYeqsKalaEklvrearrrsglpvvivRpsiitg 208
                              +d++ +++    +n Y  sKa+aE+lv++++++ +lpv+ivR  +++g
     KHJ33395.1 190 ----------EDDLLETTILAPTNPYAASKAAAEMLVHSYQKSFKLPVIIVRSNNVYG 237
                    ..........7999999999**********************************9998 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   4.1e-08   8.2e-05      35     143 ..     101     232 ..      93     245 .. 0.73

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 4.1e-08
                     HHCTTTCEEEE--TT-CCHHHHHHTT-..SEEEES---TCC.....HHHH..........HHHHHHHHHHCT--EEEEEEETTTTSGCGCHHHHH CS
  NAD_binding_10  35 leaeeglevvegdvtdvedlaealkga..daVvsalggggk.....deeg..........aknivdaakeagvkRfvlvsaigvgdevpgefgew 112
                     l ++ + +  +gd+t+++++ + l+++  d+++  +++++      +  +          +  +++ ak+ g+k+f+ +s+  v+ ev ++ +++
      KHJ33395.1 101 LNNKRNFNFYHGDITNPSEVMDCLEQYniDTIFHFAAQSHVdlsfgN--SyafthtnvygTHVLLESAKKIGIKKFIHISTDEVYGEVRDDEDDL 193
                     55667888999*************96611566655544444344431..044555567889999*********************9999998887 PP

                     HHHCC....HHHHHHHHHHHHHHHH...S.SSEEEEEEE CS
  NAD_binding_10 113 nkell....kaylaakraaeellra...s.gldwTivrp 143
                      ++++    ++y+a k+aae l+ +   s +l   ivr 
      KHJ33395.1 194 LETTIlaptNPYAASKAAAEMLVHSyqkSfKLPVIIVRS 232
                     766433343788888888888875544455888888885 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.0     0.003         6       1      71 [.      54     127 ..      54     166 .. 0.79
   2 !    7.9   0.1   0.00093       1.9     147     168 ..     203     224 ..     198     236 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.003
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEE.EESCHHHHHHHHHHHHHT..TSEEEEEE-TTTSHHHHHHHHHHH CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvv.vdrseekleevakelkee..gakalaiqvDvtdreevealveka 71 
                 k +l+tG+++ I   +a++l    a+ +  v+  + +   ++++ +++  ++++ ++++D+t+ +ev + +e+ 
  KHJ33395.1  54 KNILITGGAGFIACWLARHLTLTYADSYNiVSFDKLDYCSTLNNTRALnnKRNFNFYHGDITNPSEVMDCLEQY 127
                 689***************99765555444355555556667777776666889**************9999886 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00093
                 HHHHHHHHHHHHHHHHHHHHHG CS
   adh_short 147 aaYsAsKaavagltrslakela 168
                  +Y+AsKaa ++l++s +k ++
  KHJ33395.1 203 NPYAASKAAAEMLVHSYQKSFK 224
                 68*************9998766 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   1.6e-05     0.031       4      93 ..      57     140 ..      55     179 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.6e-05
                 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE------ CS
          KR   4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlr 93 
                 litGG+G ++  lar+l    a +  ++s ++    +  +++++l++   + ++++ D++++++v  +le+++     i  ++h A  ++
  KHJ33395.1  57 LITGGAGFIACWLARHLTLTYADSYNIVSFDKLDYCSTLNNTRALNN-KRNFNFYHGDITNPSEVMDCLEQYN-----IDTIFHFAAQSH 140
                 9***************************9994433333445555544.5699*******************97.....999999987654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 2995.02
//
Query:       KHJ33396.1  [L=466]
Description: putative seryl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.9e-37  127.9   0.2    7.5e-37  127.0   0.0    1.5  2  tRNA-synt_2b    tRNA synthetase class II core domain (G, H, P
    2.8e-16   59.7   8.4    2.8e-16   59.7   8.4    1.7  2  Seryl_tRNA_N    Seryl-tRNA synthetase N-terminal domain
  ------ inclusion threshold ------
        2.7    6.8   6.2       0.45    9.4   0.2    2.0  2  Cytochrom_C552  Cytochrome c552


Domain annotation for each model (and alignments):
>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.91   5.4e+03     105     105 ..      77      77 ..      26     128 .. 0.55
   2 !  127.0   0.0   1.2e-40   7.5e-37       1     178 [.     224     410 ..     224     411 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.91
                   G CS
                   x RF
  tRNA-synt_2b 105 m 105
                   m
    KHJ33396.1  77 M 77 
                   2 PP

  == domain 2  score: 127.0 bits;  conditional E-value: 1.2e-40
                   EEEEETT.SEEEEE-SSSHHHHHHHHHHHEEEBGGSSEEEEEEEEEEBTTTS....TBCTTTB-SEEEEEEEEEEESGGGHHHHHHHHHHHHHHHHH CS
                   xxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b   1 Ykledrn.dreyiLkPtneetfvelirdevlrskrLPlklyqiqtkyRdEks....dsrGLlRvreFhqkdgyvfhaeaslddslrdlikaisrife 92 
                   Yk+ d   +++++L++t+e+++ + + de++  k+LP++++ ++++yR+E+     d  G++Rv++F++ +++v  +++++ ++++d++   +++++
    KHJ33396.1 224 YKVIDGVaQNDKYLIATSEQPISAFHADEWIIAKDLPIRYAGFSSCYRREAGshgrDAWGIFRVHQFEKIEQFVLTSPEKSFEMFEDMMAISEEFYQ 320
                   56665444689****************************************66887777************************************** PP

                   HTT.SCEEEEEEGTTSCBTTSEEEEEEEEETTTSEEEEEEEEEEEETHHHHHTTE...EEECTTSSEEEEEEEEEE.EEHHHHHHHHHHH CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx RF
  tRNA-synt_2b  93 rlglefraiielmsaksadykdkkefeavsesltkgieigtiqklgtrlserlga...tvldennreksvimicaa.igveRllsaileq 178
                   +lg+++r +  + +a +  +++k+++ea+++ ++ + e+++++++ +++s++l++   t l+ + r+k v++++ + +++eR l+++le+
    KHJ33396.1 321 SLGIPYRIVAIVSGALNNAAAKKYDLEAWFPYQGEYKELVSCSNCTDYQSRALEIrfgTKLQTEIRKKYVHALNSTlCATERALCCLLEN 410
                   *****9988888999999*************************************6655577788***********999*********98 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.7   8.4   4.7e-20   2.8e-16       1     108 []       1     112 [.       1     112 [. 0.96
   2 ?   -3.0   0.0       1.5   8.7e+03      85     100 ..     211     226 ..     207     230 .. 0.74

  Alignments for each domain:
  == domain 1  score: 59.7 bits;  conditional E-value: 4.7e-20
                   ---H.HHHHH...-HHHHHHHHCCCTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTS-TCCCCCCCHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N   1 MLDi.klire...npeavkeklkkRgedkadvdelleldekrrelqveleelqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkel 93 
                   MLDi +++ e   +p+++ke+++kR++ ++ vde+++l+e  r++q ++ +++++ N ++k+Ig + k+ke+a++l+++  e  +e k+l +  +  
    KHJ33396.1   1 MLDIyDFLIEkggDPKKIKESQRKRFAPEEAVDEVIALYEDHRKTQYAATQVNSKINDIQKQIGIKRKAKENADDLMKQKLEFEKEKKELLDSAAIK 97 
                   8998345566899************************************************************************************ PP

                   HHHHHHHHCTS---- CS
  Seryl_tRNA_N  94 eaeleklllaiPNip 108
                   e  l+ ++ +i+Ni+
    KHJ33396.1  98 ELHLKRKIKTIGNIV 112
                   *************96 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.5
                   HHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N  85 aleaelkeleaelekl 100
                   a++a+l++ ++el k+
    KHJ33396.1 211 AKTAQLEQFDEELYKV 226
                   5678888888888876 PP

>> Cytochrom_C552  Cytochrome c552
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   1.6     0.081   4.8e+02     293     362 ..      51     123 ..      27     129 .. 0.47
   2 ?    9.4   0.2   7.4e-05      0.45     103     171 ..     337     406 ..     330     407 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.081
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT--HHHHH...HHHHHHHHHHHHHHHHHSSTTHHHHSHHH CS
  Cytochrom_C552 293 qveaiqervaelklraedalvkahkeakkaedagateeelk...earelirkaqwrldfvaAensagfHaPee 362
                     qv+++ +++ ++  +  +a  +a   +k+  + +++++el     ++el+ k   +++  +  +s+ +H++ee
      KHJ33396.1  51 QVNSKINDIQKQIGIKRKAKENADDLMKQKLEFEKEKKELLdsaAIKELHLKRKIKTIGNIVHESVPVHNDEE 123
                     2222222222222222222222222233333333333333223355555656666666666666666666655 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 7.4e-05
                     HHHHHHHHCSSBCCCCTTT--S-S-HHHHB-TTTHHB----H.HHHHHHHHTT---CTTS-HHHHHHHHH CS
  Cytochrom_C552 103 eekgeedyfstkyaevgkeivnsvgCadCHdpkdmeLritrp.tlkralealgvdevkkatrqekrtlvC 171
                     ++ ++++y  + +  ++ e ++ v+C++C d ++ +L i+   +l+  +++  v+  +++     r+l C
      KHJ33396.1 337 NNAAAKKYDLEAWFPYQGEYKELVSCSNCTDYQSRALEIRFGtKLQTEIRKKYVHALNSTLCATERALCC 406
                     556667999999***************************9987888888888888777666666777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (466 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1143  (0.0637515); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.38
# Mc/sec: 3639.07
//
Query:       KHJ33397.1  [L=378]
Description: putative solute carrier family 35 member e3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-08   33.0  24.2    6.1e-08   32.3  24.2    1.2  1  TPT         Triose-phosphate Transporter family
    3.1e-05   24.2  14.5    3.1e-05   24.2  14.5    2.4  2  EamA        EamA-like transporter family
  ------ inclusion threshold ------
       0.22   11.6   1.9       0.28   11.3   0.1    2.0  2  Tuberculin  Theoretical tuberculin protein


Domain annotation for each model (and alignments):
>> TPT  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3  24.2     1e-11   6.1e-08       8     290 .]      76     365 ..      72     365 .. 0.80

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 1e-11
         TPT   8 llWYllnvvfni....lnKkilnvf...pyPltvsavqllvgsvlilvlwalglkkrpkisse..flkailplalvktlghvlavvslskvaVSfthtv 97 
                 ++W ++n++  i    +nK i++        lt +a++++++++    l++l   + + ++ +   +k i+pla++ +l  +l ++sl+  +V f ++ 
  KHJ33397.1  76 IVWMVVNTLATIgivfTNKAIFSDSslrLTQLTFAAFHFFITWLT---LFTLSRSQFAMFTPKkgAVKDIFPLAIAMALNVILPNLSLAFSTVTFYQVA 171
                 67888876654333339*****98833334566777777777777...444444444444444469********************************* PP

         TPT  98 KasePiFtvilsrlllgeklsllvylsLlpivgGvalasvtE......lsFnl...igfisAlisnltfslrnifsKkllkklkdldalnlfaiitils 187
                 + +     +i+  +l++ +l+ + +l+L+p   Gv + s  +      ++ +    +g+i A++  +++sl  i+     kk  ++++++l+   + l+
  KHJ33397.1 172 RILLTPTVAIMNYILYKATLPRKAILALVPACLGVGMVSYYDskpssdVNVKTtssLGIIFACAGIFASSLYTIWISSYHKK-LNMNSMQLLYNQAPLA 269
                 *99888899*****************************98651111113332222267788888878888877777666666.3599999999999999 PP

         TPT 188 lllllPvallvegvlktpsllkstkvslkevllllllsgvlfhlynqvaymvLervspvthsvantvKrvvvIvlsvlvfknpvsllnaiGtavaivGv 286
                 ++lll v+ +v+    +p+ ++       + +ll+++sg++  l n+  + +++++ pv+ +v   vK   ++++   + +  vs   +iG+ +a+ G+
  KHJ33397.1 270 AFLLLYVIPFVDT---FPTWTEVP----VNRWLLIMMSGLFASLINMSQFFIIAQTGPVSSTVVGHVKTCSIVAIGWSISGRAVSDKALIGVIIALGGI 361
                 9999999999999...66666665....567999***************************************************************** PP

         TPT 287 flYs 290
                 + Ys
  KHJ33397.1 362 ITYS 365
                 ***8 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3  15.8     0.029   1.7e+02      14     136 ..      85     210 ..      72     211 .. 0.69
   2 !   24.2  14.5   5.2e-09   3.1e-05       2     134 ..     228     363 ..     227     366 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.029
        EamA  14 waiyfvlskillrkv.....spltltfvrfliagillliiallkegklaklslkdwllllllgllgtvlafllffyalkktsasnasli.tslePvftl 106
                   i++v++ +++ +        lt++++ f+i  + l+ ++  +   +  +++ +++ ++ l+ ++++l  +l + +l  +++++  ++ ++l+P  ++
  KHJ33397.1  85 ATIGIVFTNKAIFSDsslrlTQLTFAAFHFFITWLTLFTLSRSQFAMF-TPKKGAVKDIFPLA-IAMALNVILPNLSLAFSTVTFYQVArILLTP-TVA 180
                 445555553333333012225567777777766666665554444444.66666677777777.69999999999**********9999555555.566 PP

        EamA 107 ilsvlllgekltlkqllgivlillGvllil 136
                 i+ ++l++ +l  k +l++v + lGv +++
  KHJ33397.1 181 IMNYILYKATLPRKAILALVPACLGVGMVS 210
                 7799999*******************9997 PP

  == domain 2  score: 24.2 bits;  conditional E-value: 5.2e-09
        EamA   2 lgillallaalfwaiyfvlskillrkv..spltltfvrfliagillliiallkegkl..aklslkdwllllllgllgtvlafllffyalkktsasnasl 96 
                 lgi++a ++ + +++y++ +    +k+  ++++l+  +  +a++lll ++++ +  +   + +++ wll++  gl+++++ +  +f  +  t++   ++
  KHJ33397.1 228 LGIIFACAGIFASSLYTIWISSYHKKLnmNSMQLLYNQAPLAAFLLLYVIPFVDTFPtwTEVPVNRWLLIMMSGLFASLINM-SQFFIIAQTGPVSSTV 325
                 69******************9998887446678888888899999999999999998899999999**************95.7777777777888899 PP

        EamA  97 itslePvftlilsvlllgekltlkqllgivlillGvll 134
                 + ++    ++ +++ + g  ++ k l+g++++l G++ 
  KHJ33397.1 326 VGHVKTCSIVAIGWSISGRAVSDKALIGVIIALGGIIT 363
                 ***********************************985 PP

>> Tuberculin  Theoretical tuberculin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.2      0.43   2.6e+03      11      20 ..      27      36 ..      25      37 .. 0.85
   2 ?   11.3   0.1   4.8e-05      0.28      17      34 .]     308     325 ..     307     325 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.43
  Tuberculin 11 seSvskNGsQ 20
                s+ v++ Gs 
  KHJ33397.1 27 SGTVGRDGSS 36
                7899**9995 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 4.8e-05
  Tuberculin  17 NGsQaRlvAdvGPeSaTv 34 
                 N sQ  ++A +GP S+Tv
  KHJ33397.1 308 NMSQFFIIAQTGPVSSTV 325
                 5589999**********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       733  (0.0408835); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.20s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2978.34
//
Query:       KHJ33398.1  [L=221]
Description: hypothetical protein EV44_g1701 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-30  106.0   8.7    3.6e-29  101.4   1.3    2.1  2  CENP-H       Centromere protein H (CENP-H)
    0.00085   19.9   3.1    0.00085   19.9   3.1    2.2  2  YabA         Initiation control protein YabA
  ------ inclusion threshold ------
       0.16   12.2   2.2       0.16   12.3   0.7    1.8  2  ATP-synt_DE  ATP synthase, Delta/Epsilon chain, long alpha-he
       0.69   10.1   7.2      0.082   13.1   1.7    1.9  2  DUF3340      C-terminal domain of tail specific protease (DUF
        4.4    7.8  14.4        4.5    7.8   5.9    3.1  2  ZapB         Cell division protein ZapB
        9.3    7.0  10.3        3.6    8.3   0.9    2.7  2  PMC2NT       PMC2NT (NUC016) domain


Domain annotation for each model (and alignments):
>> CENP-H  Centromere protein H (CENP-H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   1.1   0.00056       1.7      29      94 ..      12      81 ..       4      85 .. 0.87
   2 !  101.4   1.3   1.2e-32   3.6e-29       2     112 .]     103     218 ..     102     218 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00056
      CENP-H 29 ltevekenlrlkrknrelaael.lelakekesek...eklkeelekleaelkksrqrwrvvknvasaiiv 94
                lt+ e ++l+  ++  el +e+ le+ak k +++   +  +  +++++  l k+r+  +v  nv+  +i+
  KHJ33398.1 12 LTQEENQILESYNQLLELHQEVaLEKAKSKLKRDepvHVSELDISEAQDALLKARALFQVRSNVTESVII 81
                6788888888889999******88999999999998755778899*******************999997 PP

  == domain 2  score: 101.4 bits;  conditional E-value: 1.2e-32
      CENP-H   2 lplieqrdelssellklsqelrelqeeltevekenlrlkrknrelaaell.elakekesek....eklkeelekleaelkksrqrwrvvknvasaiivg 95 
                   l+e+rdels +l +ls++ ++lq+el ++e+en+rl+ +n +l++++l  l+  ++++k    ++  +el+++ + +k +r+rw++vk+++s++ivg
  KHJ33398.1 103 IRLLEKRDELSFSLSQLSRKFSNLQDELLKLEVENIRLTSENSKLTTSMLdFLEASSSKDKnndsSQSLQELDEISSAVKFARRRWKIVKGIVSGLIVG 201
                 5799*********************************************5244444433336688889999**************************** PP

      CENP-H  96 SgVdWaeDekLrelVld 112
                 Sg+dW +D+kL ++Vl+
  KHJ33398.1 202 SGIDWSRDPKLLDIVLE 218
                 ***************95 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.8     0.088   2.6e+02      35      54 ..      14      33 ..       2      65 .. 0.58
   2 !   19.9   3.1   2.8e-07   0.00085       6      75 ..     105     176 ..     100     180 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.088
                HHHHHHHHHHHHHHHHHHXX CS
        YabA 35 leenaeLeleneklrerlee 54
                 een+ Le  n+ l  ++e 
  KHJ33398.1 14 QEENQILESYNQLLELHQEV 33
                45555555555555444422 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 2.8e-07
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH....XXXXXXXXXXXXXXXXXXXXXXX CS
        YabA   6 lfdkleeleeqleelleeleelkeelaelleenaeLeleneklrerl....eeeekkekekkkelsegkenLar 75 
                 l++k +el+ +l++l++++++l++el +l  en +L+ en+kl + +    e   +++k+k++++s++ ++L +
  KHJ33398.1 105 LLEKRDELSFSLSQLSRKFSNLQDELLKLEVENIRLTSENSKLTTSMldflE--ASSSKDKNNDSSQSLQELDE 176
                 5677789999***********************************9977431..44444555555666666654 PP

>> ATP-synt_DE  ATP synthase, Delta/Epsilon chain, long alpha-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.7   5.3e-05      0.16      11      45 ..      34      71 ..      32      72 .. 0.87
   2 ?   -3.1   0.0       3.4     1e+04      26      40 ..     171     185 ..     160     190 .. 0.55

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 5.3e-05
                 HHHHHHHHHHH....HHHHSS-HHHHHHHHHHHHHHHHH CS
  ATP-synt_DE 11 AkerAeerLee....asddnidyarAqaaLrRAlaRlqv 45
                 A+e+A+ +L+     +  ++ d  +Aq aL +A+a +qv
   KHJ33398.1 34 ALEKAKSKLKRdepvH-VSELDISEAQDALLKARALFQV 71
                 899*******999952.555***************9998 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 3.4
                  SS-HHHHHHHHHHHH CS
  ATP-synt_DE  26 nidyarAqaaLrRAl 40 
                   +++ +   a + A+
   KHJ33398.1 171 LQELDEISSAVKFAR 185
                  355555555555454 PP

>> DUF3340  C-terminal domain of tail specific protease (DUF3340)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.3      0.33   9.7e+02      89     104 ..      32      47 ..       3      83 .. 0.53
   2 ?   13.1   1.7   2.7e-05     0.082      53     130 ..      96     174 ..      86     184 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.33
     DUF3340  89 rlarenerekakglkp 104
                 + a+e+++ k k+ +p
  KHJ33398.1  32 EVALEKAKSKLKRDEP 47 
                 1222222222222222 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 2.7e-05
     DUF3340  53 klleediawlkerkekktvsLnekkrkaereeqeakrlarenerekakglkplksl.lleknlekeeelekedekeaee 130
                 +++++d+ +l e++++ ++sL    rk  + ++e  +l+ en r + ++ k  +s+ +  ++ ++++++++++++++e 
  KHJ33398.1  96 SIYQQDLIRLLEKRDELSFSLSQLSRKFSNLQDELLKLEVENIRLTSENSKLTTSMlDFLEASSSKDKNNDSSQSLQEL 174
                 67899999999***********************************999999888844444444444444445555544 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   1.3     0.037   1.1e+02      33      57 ..       8      32 ..       4      75 .. 0.70
   2 ?    7.8   5.9    0.0015       4.5      17      62 ..     106     151 ..     100     189 .. 0.71

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.037
        ZapB 33 eneelkeenreleeeneqlkeerea 57
                en  l++e +++ e+ +ql e +++
  KHJ33398.1  8 ENPILTQEENQILESYNQLLELHQE 32
                4444555555555444444444443 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0015
        ZapB  17 idtitlLqmeieeLkeeneelkeenreleeeneqlkeereawqerl 62 
                 +++ ++L++ +++L ++ ++l++e  +le en +l  e ++++  +
  KHJ33398.1 106 LEKRDELSFSLSQLSRKFSNLQDELLKLEVENIRLTSENSKLTTSM 151
                 5566666666666666666666666666666666666666655544 PP

>> PMC2NT  PMC2NT (NUC016) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.9    0.0012       3.6      28      80 ..      11      63 ..       4      66 .. 0.79
   2 ?    2.5   2.7     0.078   2.3e+02      28      67 ..     139     179 ..     110     191 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0012
      PMC2NT 28 sldeqserllslinsllklaaskseisassklededdveekfksvvdvvDsll 80
                 l+++++++l++ n+ll+l+++    +a+skl+  + v  +  +++++ D ll
  KHJ33398.1 11 ILTQEENQILESYNQLLELHQEVALEKAKSKLKRDEPVHVSELDISEAQDALL 63
                68899*****************9999887555555555556666999999987 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.078
      PMC2NT  28 sldeqserllslinsllklaaskseisas.sklededdvee 67 
                 +l++++++l +++ ++l++ +sk+++++s ++l+++d++++
  KHJ33398.1 139 RLTSENSKLTTSMLDFLEASSSKDKNNDSsQSLQELDEISS 179
                 46778888888888888888888777666566677777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1166  (0.0650343); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1622.76
//
Query:       KHJ33399.1  [L=449]
Description: putative tubulin alpha chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.2e-67  226.2   0.0    6.1e-67  225.6   0.0    1.3  1  Tubulin    Tubulin/FtsZ family, GTPase domain
    3.5e-50  169.4   0.1      6e-50  168.6   0.1    1.4  1  Tubulin_C  Tubulin C-terminal domain
     0.0052   16.5   0.0      0.012   15.3   0.0    1.6  2  Tubulin_3  Tubulin domain


Domain annotation for each model (and alignments):
>> Tubulin  Tubulin/FtsZ family, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  225.6   0.0     1e-70   6.1e-67       1     196 [.       3     213 ..       3     214 .. 0.99

  Alignments for each domain:
  == domain 1  score: 225.6 bits;  conditional E-value: 1e-70
                 EEEEEEEHHHHHHHHHHHHH...HHHCH................HHHT.....TTEEEEE....EEESBHHHHHTS-GS........EEEE--CCCCTT CS
     Tubulin   1 eiivigvGqcGnqignelwellakehgiqsdg............dslesfFsesgkveyiprsvaidtdpqvlneikags..elfnpnklllgkegagn 85 
                 e+i ++vGq+G+qi+n++wel++ ehgiq+dg            + +++fFse+g+++y+pr++ +d++p+v++e+++g+  +lf+p+++++gke+a+n
  KHJ33399.1   3 EVISVNVGQAGCQIANSCWELYCLEHGIQPDGyltekrkaaepdEGFSTFFSETGQGKYVPRTIYCDLEPNVVDEVRTGTyrSLFHPEQMITGKEDASN 101
                 799*****************************************9****************************************************** PP

                 C--TT-HHHHHHHHHHTHHHHHHHHTT-SE.SEEEEEEETTSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE--.GG.G-HHHHHHHHHHHHHHHHT-SE CS
     Tubulin  86 ngaggypevgkeaaeeileeirkevekcdslqgffitaslgGGTGSGlgpvilevlkeeypkalvvtvvvlPs.efsevvvepynailalkelieesda 183
                 n+a+g+++vgke+++++l++ir  +++c  lqgf++++s+gGGTGSG+g++++e+l+ ++ k++++ ++v+P  ++ ++vvepyn+il++++  e+sd+
  KHJ33399.1 102 NYARGHYTVGKELIDQVLDKIRHVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDFGKKVKLEFCVYPApQTATSVVEPYNSILTTHTTLEHSDC 200
                 **************************************************************************999********************** PP

                 EEEEEHHHHHCCS CS
     Tubulin 184 vividNdaLlkil 196
                  +++dN+a+++i+
  KHJ33399.1 201 SFMVDNEAIYDIC 213
                 ************9 PP

>> Tubulin_C  Tubulin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.6   0.1     1e-53     6e-50       1     125 [.     263     392 ..     263     393 .. 0.99

  Alignments for each domain:
  == domain 1  score: 168.6 bits;  conditional E-value: 1e-53
                 TTC-EEEEEEESSSCTTTTTCS-HHHHHHHHHTCSGGGBSSSTSTTTSSEEEEEEEEEESSSHHHHHHHHHHHHHTTTS-BSTTSTTTEEEEEEECECT CS
   Tubulin_C   1 PrlhFlltsyaPlvsaekaavektsvqdvtrallepknimvkvdprkgkylaiallirGdvepkevnkavqrikekkkaqfveWiptgikvalnkkspy 99 
                 Pr+hF+l++y+P++s +ka++e++svq++  +++ep+n+mvk+dpr+gky+a++ll+rGdv+pk+v++av+++k+k+++qfv+W+ptg+k++++ ++p+
  KHJ33399.1 263 PRIHFPLVAYSPVISTAKASHESNSVQEISMSCFEPNNQMVKCDPRNGKYMATCLLYRGDVVPKDVHAAVATLKTKRTIQFVDWCPTGFKIGICFQPPQ 361
                 9************************************************************************************************** PP

                 -TTTS.....SCEEEEEEEEGGGHHHHHHHH CS
   Tubulin_C 100 vkkqs.....kvsvlmlaNttsiaelfkrll 125
                 ++++      +++v+ml+Ntt+i+e+++ l+
  KHJ33399.1 362 MVPNGdladvNRAVCMLSNTTAISEAWSALS 392
                 ****99*********************9876 PP

>> Tubulin_3  Tubulin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   2.1e-06     0.012      42     106 ..     107     165 ..      78     205 .. 0.76
   2 ?   -3.7   0.0       1.4   8.1e+03      33     114 ..     397     411 ..     381     434 .. 0.55

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.1e-06
   Tubulin_3  42 dwsvGeeLfeeldkehdlldrdlrpfaeecdqlrglqvftgvddaWG.Gfaakylerlrdeygkks 106
                 +++vG+eL ++      +ld+ +r  a++c  l+g+ vf +     G Gf+a  +erl  ++gkk 
  KHJ33399.1 107 HYTVGKELIDQ------VLDK-IRHVADNCSGLQGFLVFHSFGGGTGsGFGALLMERLSVDFGKKV 165
                 45666666543......4664.9******************99887769***************96 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.4
   Tubulin_3  33 lnskllpfedwsvGeeLfeeldkehdlldrdlrpfaeecdqlrglqvftgvddaWGGfaakylerlrdeygkksilvWvlal 114
                 l                                                                    y+k++ + W ++ 
  KHJ33399.1 397 LM-------------------------------------------------------------------YSKRAFVHWYVGE 411
                 33...................................................................4444444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3297.92
//
Query:       KHJ33400.1  [L=305]
Description: hypothetical protein EV44_g1221 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       520  (0.0290033); expected 358.6 (0.02)
Passed bias filter:                      210  (0.0117129); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2186.04
//
Query:       KHJ33401.1  [L=240]
Description: hypothetical protein EV44_g0143 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.8e-05   22.4   4.4    0.00085   19.2   4.4    2.4  1  Pga1      GPI-Mannosyltransferase II co-activator


Domain annotation for each model (and alignments):
>> Pga1  GPI-Mannosyltransferase II co-activator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   4.4   4.8e-08   0.00085      70     167 ..      79     213 ..       6     221 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 4.8e-08
        Pga1  70 lndlksdetyqvkicWtAidPisikdldhlvv...............................psstlfegtesdea.rlfvefkvkadsYpl....le 132
                 l+ +++   y+ +icWtA++P s++ + + +v                               +  + ++  e ++   l +++ + ad Y +    ++
  KHJ33401.1  79 LHGISQRHRYEARICWTATQPTSFQLVTYDFVevlqsldlkfslekysmsrklgssglntignKYFQDLKVSELNASsSLLLQIFAAADYYTTnaslMQ 177
                 667889999****************99999999999999999999999999999999998654333333333334445899999999999999666666 PP

        Pga1 133 dkekvpinvsviklklgi.pvdLYsiivylillvil 167
                   + v++++ +   +l i p  L  +i+y+++lv+ 
  KHJ33401.1 178 YPQPVQVEIILDPYFLNIvPKSLIPTIAYILILVVG 213
                 677777777777788885599999999999988864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 1910.37
//
Query:       KHJ33402.1  [L=629]
Description: putative protein phosphatase 2c domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-35  122.6   0.1    9.7e-31  107.3   0.0    2.7  2  PP2C      Protein phosphatase 2C
     0.0022   17.7   0.0     0.0055   16.4   0.0    1.7  1  PP2C_2    Protein phosphatase 2C


Domain annotation for each model (and alignments):
>> PP2C  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.1   8.6e-06     0.077      27      71 ..     210     260 ..     191     293 .. 0.73
   2 !  107.3   0.0   1.1e-34   9.7e-31      84     249 ..     404     575 ..     354     584 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 8.6e-06
                 TTCCCCCCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHCHTTH......H CS
        PP2C  27 sssgkssvsffavfdghggseaakyarehleeilksqksfeele......k 71 
                 s sg  +v  f+vfdghgg e++++ +++l e +++  +  el+      k
  KHJ33402.1 210 STSGGPQVFCFGVFDGHGGNECSEFLKNNLYEYIEKTADLFELKctsqeiK 260
                 4566778889*********************99999888888774333332 PP

  == domain 2  score: 107.3 bits;  conditional E-value: 1.1e-34
                 HHHHHHHHHHHCHCCT-EEEEEEEEEETTE............EEEEEESS-EEEEEETTEEE.EECS---STTSHHHHHHHHHTT--EEE...CCEEET CS
        PP2C  84 tdeelksskantepsksGstavvalirgtk............lyvAnvGDSravLcrkgnak.keltedHkpsdedEreRIeeaggsvsn...gegrvn 166
                  d ++++ + nte    Gsta+++li+  +            + vA+vGD+r++Lc+  +   k +t+ H+ps++dE +R++++  s+     ge r+ 
  KHJ33402.1 404 KDTNIQK-IGNTERFLGGSTASIVLISTPTptpfwhpsspstMVVAHVGDTRIILCDTATGLaKPCTKNHHPSSPDESNRLRRYATSFVTdsfGEERIS 501
                 3344443.444588999**********9999***************************99999*******************987766666999***** PP

                 TTBSBSB-EE-GGGTCCCCCCSTSB---EEEEEEE-TT.EEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH CS
        PP2C 167 gsLavsRalGDlelkpketeeqlvsaePdvtsvkltee.defliLacdGlwdvlsdqeavdlvrdelekkkspeevaeelvdea 249
                 g  a++Ra+GD ++k+       vsaePd++ ++l     ++l+L++dG+   l+dqe+vd+v++  +    pe+ a+e+v +a
  KHJ33402.1 502 GL-ANTRAFGDIHSKR-----IGVSAEPDICRIELMAAeYSMLVLVSDGVSGSLNDQEIVDIVKEAKT----PEQGAREVVGFA 575
                 97.************9.....79**************99************************99877....666666666655 PP

>> PP2C_2  Protein phosphatase 2C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   6.2e-07    0.0055     105     183 ..     441     553 ..     419     576 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 6.2e-07
      PP2C_2 105 tpdeivalqiGDGaivvrdrdgevqllgepdsgeyanq.........ttfltsedaeeel...........................rirrlk..ledg 165
                 +p ++v++++GD+ i++ d++  +  +++++++  +           t f+t++  +ee+                           ri   +  + ++
  KHJ33402.1 441 SPSTMVVAHVGDTRIILCDTATGLAKPCTKNHHPSSPDesnrlrryaTSFVTDS-FGEERisglantrafgdihskrigvsaepdicRI---ElmAAEY 535
                 57889**********999999888888885443333333344455577788887.555556***********************66444...433688* PP

      PP2C_2 166 dalllmTDGlanslrdee 183
                 ++l+l++DG++ sl d+e
  KHJ33402.1 536 SMLVLVSDGVSGSLNDQE 553
                 ***********9997655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (629 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       902  (0.0503096); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.24s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 4518.10
//
Query:       KHJ33403.1  [L=333]
Description: putative iron transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-72  242.9  10.4    4.7e-72  242.8  10.4    1.0  1  FTR1      Iron permease FTR1 family
  ------ inclusion threshold ------
       0.56    9.5  10.2        1.1    8.6   3.6    2.3  2  ThrE      Putative threonine/serine exporter


Domain annotation for each model (and alignments):
>> FTR1  Iron permease FTR1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.8  10.4   5.2e-76   4.7e-72       2     299 ..       8     316 ..       7     323 .. 0.94

  Alignments for each domain:
  == domain 1  score: 242.8 bits;  conditional E-value: 5.2e-76
        FTR1   2 faiflvvlregleaslivsvllallkq.........tqretdklqvwagialavllalaigqafasitaalqkdkalieeellegvlsliavvviswmi 91 
                 + if+vv+re+le ++ivsvll +lk+          +r+++  qvw+g+a ++l++l  g++++++++ l++  + + e ++eg +++ a+v+is ++
  KHJ33403.1   8 VPIFFVVFRETLETAIIVSVLLIFLKKlfndpaandRLRKSLTQQVWLGAAIGLLICLMAGGGLITAFYVLGNTTWQKYEYIYEGSFAIFASVIISILG 106
                 679***************************9999988889999*****************************999************************ PP

        FTR1  92 lwmrrvgkklkeeveqklakavaeiknrekaa.qkgekgsekwalfilsFlivlREGlEavLfvaaivaytvkrvsalilgvvlGaliavvlglliyrg 189
                  + +r ++k++e+++ kl+ka++  +   + +  + +++ ek+ +fi++F+++lREGlEav+fva+++ +++  +sa++l+vv+G+l +  +g+l+yrg
  KHJ33403.1 107 AALLR-VSKMQEKWRMKLSKALENSSPIPRSKrAIFKNWCEKYVMFIVPFITILREGLEAVIFVAGVSFSAP--ASAVPLPVVMGMLSGGFVGWLLYRG 202
                 *****.****************988666666679**************************************..9************************ PP

        FTR1 190 lvklslqsffilegflLllvaagLfsvgtlel...lekaeacngkdyiefkkskslskisllslllvaflavereg...leivlaliGwantgplg.li 281
                 + +   + ++i+++ +L+lvaagLfs + +++   + ++ a  g+d+ e++ ++++++i++ s++++++  ++++g   + +++ l+Gw+n++++g +i
  KHJ33403.1 203 GKSSKIKFVLIVSTAILYLVAAGLFSRA-VWFfqqQNWNVA-VGGDAAEVGAGPGSYDIDQ-SVWHINYASPYINGggaWGVLNSLVGWQNSATYGsVI 298
                 ****************************.776221445555.8******************.************************************* PP

        FTR1 282 vyaavwlvvlillgllli 299
                 +y+ +w+v++i + l+ +
  KHJ33403.1 299 SYNCYWVVIIIGFLLMRY 316
                 ********9998777655 PP

>> ThrE  Putative threonine/serine exporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.5    0.0019        17     125     177 ..      54     107 ..      48     128 .. 0.81
   2 ?    8.6   3.6   0.00012       1.1     115     178 ..     167     230 ..     163     250 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0019
        ThrE 125 lfggdwidflvaflagllggllrlll.akrglnsfvleavaaflasllallavs 177
                  +g+ +  +++ +++g+l+ +++ l  + ++ ++++ e   a++as++++++++
  KHJ33403.1  54 WLGAAIGLLICLMAGGGLITAFYVLGnTTWQKYEYIYEGSFAIFASVIISILGA 107
                 678888888999999999999998887889999999999999999999887766 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00012
        ThrE 115 aglaaaafallfggdwidflvaflagllggllrlllakrglnsfvleavaaflasllallavsl 178
                 + +a+++f+  + + ++ +++ +l g+++g+l +   k++ ++fvl + +a+l  + a l+ + 
  KHJ33403.1 167 IFVAGVSFSAPASAVPLPVVMGMLSGGFVGWLLYRGGKSSKIKFVLIVSTAILYLVAAGLFSRA 230
                 5678889999999999999***************************************999884 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       960  (0.0535445); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2406.93
//
Query:       KHJ33404.1  [L=605]
Description: putative multicopper oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.5e-41  139.8   8.7    7.6e-38  129.3   0.6    3.5  3  Cu-oxidase_2  Multicopper oxidase
    3.9e-40  136.6   8.0    9.3e-39  132.1   2.9    3.0  3  Cu-oxidase_3  Multicopper oxidase
    1.4e-33  116.3   1.5    1.4e-31  109.8   0.0    3.1  3  Cu-oxidase    Multicopper oxidase
     0.0014   18.7   0.1         27    4.9   0.0    4.1  4  Cupredoxin_1  Cupredoxin-like domain


Domain annotation for each model (and alignments):
>> Cu-oxidase_2  Multicopper oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   2.2     4e-05      0.18      24     121 ..      43     125 ..      16     141 .. 0.73
   2 ?   -1.0   0.0      0.29   1.3e+03      38      80 ..     198     241 ..     171     259 .. 0.68
   3 !  129.3   0.6   1.7e-41   7.6e-38       1     135 [.     355     490 ..     355     492 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4e-05
                   ETCCTTTSSEEEEEETTEEEEEEEEE-SSS.-EEEEESS-EEEEEEEEECCCCCCTCCSSGCCGSSCBSEEEE-TTEEEEEEEES.S-EEEEEEESS CS
  Cu-oxidase_2  24 ngeefsentnvitlpkgevveiviqnntkl.pHPfHlHGhdfqvlgrgpgndpeedpksynlenpvrrdtvqvppggwvairfkadnpGvwllHCHi 119
                    +++++   +v+t+  g+ + + ++n+    + ++H+HG       +               + + +     +ppg+++++ f+++++G + +H+H 
    KHJ33404.1  43 INNKWP--PPVMTATLGDQIVVNVENQLGNqTTTLHFHGIYHNGTTHM--------------DGAAQVTQCGIPPGAKFTYNFTVNQAGTYWYHSHD 123
                   555666..7899999999999999997776689999999833333222..............33344455789***********************6 PP

                   HH CS
  Cu-oxidase_2 120 lw 121
                     
    KHJ33404.1 124 KG 125
                   65 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.29
                   ETTEEEEEEEEE-SSS.-EEEEESS-EEEEEEEEECCCCCCTCC CS
  Cu-oxidase_2  38 pkgevveiviqnntkl.pHPfHlHGhdfqvlgrgpgndpeedpk 80 
                   + g++  i + n + +  + + ++Gh+f +++ ++ ++++++ +
    KHJ33404.1 198 KPGKTYLIHLVNIGAFaGQFIWFEGHNFTIVEVDGISTSPAEAE 241
                   5555555555555555555666899****998877664444444 PP

  == domain 3  score: 129.3 bits;  conditional E-value: 1.7e-41
                   XXS-SCCCCCCCEEEEEEEEEEEETCCTTTSSEEEEEETTEEEEEEEEE-SSS-EEEEESS-EEEEE...EEEECCCCCCTCCSSGC.CGSSCBSEE CS
  Cu-oxidase_2   1 dvppklptllqltsgneeaseitngeefsentnvitlpkgevveiviqnntklpHPfHlHGhdfqvl...grgpgndpeedpksynl.enpvrrdtv 93 
                   +vppk+ptl+++ s+++  +   +++ ++e  + ++++  +++eiv++n ++++HPfHlHGh+fq +   + g+g+ ++e+ k++++ + p+rrdt+
    KHJ33404.1 355 YVPPKVPTLYSVMSTGNLSQ---DPRVYGEFSHSFVIDRMKTIEIVLNNLDTGKHPFHLHGHSFQTVivsKDGEGKYDPEKAKEIQYpTIPMRRDTI 448
                   689**********8888777...99****************************************9966544455566667777777789******* PP

                   EE-TTEEEEEEEES.S-EEEEEEESSHHHHHTT-EEEEEEEC CS
  Cu-oxidase_2  94 qvppggwvairfkadnpGvwllHCHilwHldqGmalqfvvrp 135
                    ++p+g+v++rf+ dnpGvwl+HCHi+wH++qG+ ++f++ p
    KHJ33404.1 449 VLHPQGHVVLRFTSDNPGVWLFHCHIEWHVSQGLIATFIEAP 490
                   ***************************************987 PP

>> Cu-oxidase_3  Multicopper oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.1   2.9   2.1e-42   9.3e-39       2     118 ..      25     141 ..      24     142 .. 0.98
   2 ?   -1.4   0.1      0.49   2.2e+03      34      58 ..     391     415 ..     385     426 .. 0.60
   3 !    5.8   0.0    0.0031        14      75     113 ..     450     487 ..     445     491 .. 0.90

  Alignments for each domain:
  == domain 1  score: 132.1 bits;  conditional E-value: 2.1e-42
                   EEEEEEECTTEESEEEEEECTSSBS-EEEEETT-EEEEEEEE-S.SS-B-EEEET--S-GG.....GSCSGGG-B-TT-EEEEEEE--S-SEEEEEE CS
  Cu-oxidase_3   2 vtektvsplggterevitvNgqfpgptievregdtvvvnvtNkl.dentsihwhGlqqrktswmDGvpgvtqcpiqpgesftyrftvkqqagtlwYh 97 
                   +t+ +++p+g  er++i++N+++p p ++++ gd++vvnv+N+l +++t++h+hG+ +++t++mDG+++vtqc i+pg++fty+ftv+q agt+wYh
    KHJ33404.1  25 ITWVRANPDGAFERPTIGINNKWPPPVMTATLGDQIVVNVENQLgNQTTTLHFHGIYHNGTTHMDGAAQVTQCGIPPGAKFTYNFTVNQ-AGTYWYH 120
                   789999**************************************999******************************************.******* PP

                   E--TTHHHTT-EEEEEEE-HH CS
  Cu-oxidase_3  98 shlslqqaaGlaGaiiiedke 118
                   sh ++q+ +Gl  +++i d++
    KHJ33404.1 121 SHDKGQYPDGLRAPFVITDPN 141
                   ******************987 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.49
                   T-EEEEEEEE-S.SS-B-EEEET--S CS
  Cu-oxidase_3  34 gdtvvvnvtNkl.dentsihwhGlqq 58 
                    +t+++ v N+l + +   h+hG   
    KHJ33404.1 391 MKTIEI-VLNNLdTGKHPFHLHGHSF 415
                   556666.5577754556666666543 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0031
                   B-TT-EEEEEEE--S-SEEEEEEE--TTHHHTT-EEEEE CS
  Cu-oxidase_3  75 iqpgesftyrftvkqqagtlwYhshlslqqaaGlaGaii 113
                   + p+ +++ rft ++  g  ++h h++++  +Gl  ++i
    KHJ33404.1 450 LHPQGHVVLRFTSDN-PGVWLFHCHIEWHVSQGLIATFI 487
                   679999999****99.*************99**998876 PP

>> Cu-oxidase  Multicopper oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1     0.014        62     105     140 ..      92     123 ..      53     137 .. 0.85
   2 !  109.8   0.0   3.1e-35   1.4e-31       2     158 ..     149     295 ..     148     296 .. 0.92
   3 ?   -0.3   0.0      0.24   1.1e+03      82      98 ..     405     425 ..     392     486 .. 0.71

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.014
                 EEESCEEE-TTEEEEEEEEE-SSSEEEEEEEEGSSS CS
  Cu-oxidase 105 vevdsldIavGqrysvlvtanqapgnYwivasgrsn 140
                 ++v++  I +G  ++  +t nq  g+Yw++    ++
  KHJ33404.1  92 AQVTQCGIPPGAKFTYNFTVNQ-AGTYWYHS---HD 123
                 678888899************9.******99...44 PP

  == domain 2  score: 109.8 bits;  conditional E-value: 3.1e-35
                 EEEEEEEEETCBCTTSCBC.HSSCHCHHHHHTT--SEEEETTBSS.......CTTTTSGGGEEEEETTEEEEEEEESSS-BEEEEETSB-EEEEEETCE CS
  Cu-oxidase   2 eyvitlsDwyhkdakelekellasgkapadtppvpdavlingkggfnatladkdgaslatltvepgktyrlriinvsaddslnfsIeGHkltVvevDgv 100
                 e ++ +sDwyh+ ++++    + s+++p++++pvp+a l+n              +++ ++ v+pgkty+++++n++a    ++++eGH++t+vevDg 
  KHJ33404.1 149 ELILSVSDWYHEEMTTIIP-RFLSKNNPTGAEPVPQAALLND-------------TQNLKIGVKPGKTYLIHLVNIGAFAGQFIWFEGHNFTIVEVDGI 233
                 578999*************.77777889**************.............34789*************************************** PP

                 TTSEEEESCEEE-TTEEEEEEEEE-SS.SEEEEEEEE...GSSSCHHHHTTSEEEEEEEEST CS
  Cu-oxidase 101 yvepvevdsldIavGqrysvlvtanqa.pgnYwivas...grsnlieafengtaaailryse 158
                  + p+e +++ ++++qrys+l++++++ + nY+i as     ++  +++ n++ +++l y+e
  KHJ33404.1 234 STSPAEAERIYLSAAQRYSILLKTKDDiSTNYAIIASmdtDLFDVLPEDLNYNSTGFLIYDE 295
                 ************************9977*********8874556688999999999999986 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.24
                 BEEEEETSB-EEEEEE....T CS
  Cu-oxidase  82 slnfsIeGHkltVvev....D 98 
                  ++f ++GH+++ v v    +
  KHJ33404.1 405 KHPFHLHGHSFQTVIVskdgE 425
                 588999999987665556441 PP

>> Cupredoxin_1  Cupredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1     0.015        66      69      97 ..      98     126 ..       4     131 .. 0.71
   2 ?   -3.8   0.0       3.2   1.4e+04      35      54 ..     241     260 ..     234     268 .. 0.78
   3 !    4.9   0.0    0.0061        27      69     102 ..     387     419 ..     377     421 .. 0.84
   4 !    4.8   0.0    0.0068        31      68     100 ..     448     481 ..     427     484 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.015
  Cupredoxin_1  69 vlapgktttitiaplkpGeYeftcdmhmd 97 
                    ++pg+++t +++  ++G+Y ++   + +
    KHJ33404.1  98 GIPPGAKFTYNFTVNQAGTYWYHSHDKGQ 126
                   58999999999999******999877665 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 3.2
  Cupredoxin_1  35 skievkagekvklkiknkdk 54 
                   ++i + a ++ ++ +k kd+
    KHJ33404.1 241 ERIYLSAAQRYSILLKTKDD 260
                   67888888888888888886 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.0061
  Cupredoxin_1  69 vlapgktttitiaplkpGeYeftcdmhmdakGkl 102
                   v++  kt +i +++l+ G+++f+   h++ + ++
    KHJ33404.1 387 VIDRMKTIEIVLNNLDTGKHPFHLHGHSF-QTVI 419
                   788889*****************999998.6555 PP

  == domain 4  score: 4.8 bits;  conditional E-value: 0.0068
  Cupredoxin_1  68 kvlapgktttitiaplkpGeYeftcdmhmd.akG 100
                    vl p+   ++ ++ ++pG + f+c +     +G
    KHJ33404.1 448 IVLHPQGHVVLRFTSDNPGVWLFHCHIEWHvSQG 481
                   4789999******************987655566 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4245.33
//
Query:       KHJ33405.1  [L=1253]
Description: putative ef hand domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-35  121.3   0.0    1.6e-15   57.0   0.0    4.7  4  EF-hand_4   Cytoskeletal-regulatory complex EF hand
    2.8e-10   40.5   0.0    4.5e-07   30.2   0.0    4.3  3  EF-hand_7   EF-hand domain pair
    2.1e-08   33.1   0.1       0.37   10.4   0.0    5.4  5  EF-hand_1   EF hand
    1.6e-06   27.6   0.1       0.48   10.5   0.1    5.3  5  EF-hand_6   EF-hand domain
    1.4e-05   24.9   0.0    3.1e-05   23.8   0.0    1.6  1  UBA         UBA/TS-N domain
  ------ inclusion threshold ------
       0.47   10.6   4.1       0.18   11.9   0.3    2.3  2  DUF1192     Protein of unknown function (DUF1192)


Domain annotation for each model (and alignments):
>> EF-hand_4  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   4.2e-05      0.13      14      72 ..      25      84 ..      14      93 .. 0.84
   2 !   45.4   0.0   2.1e-15   6.2e-12       9      92 ..     150     233 ..     142     241 .. 0.92
   3 !   57.0   0.0   5.2e-19   1.6e-15      10      96 ..     293     382 ..     287     387 .. 0.86
   4 ?   -1.4   0.0      0.75   2.2e+03      12      29 ..    1166    1183 ..    1160    1207 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 4.2e-05
   EF-hand_4 14 eifsglkpe.dnkltgdkvapvlknskleedklekiwdladidedgkldfeefciamrli 72
                ++f+  ++e    +tg+ +   ++++++e   l +iw++ad ++ g l    f i++rli
  KHJ33405.1 25 HLFRQADSEgIGVVTGEAAVKFFEKTRIEPRILGEIWQIADKENRGLLTPAGFGIVLRLI 84
                5665554441468999*******************************************9 PP

  == domain 2  score: 45.4 bits;  conditional E-value: 2.1e-15
   EF-hand_4   9 ikkyweifsglkpednkltgdkvapvlknskleedklekiwdladidedgkldfeefciamrlifdlvngeikdvPselPewlv 92 
                   +y ++f+   +    l+g+++ +v++ + l+++ l +iw+lad ++ g l+ +ef+iam+li  l  g+++ +P++lP  l 
  KHJ33405.1 150 ATQYADLFEKSGSYGGILSGEHAKQVFERAGLPNEVLGRIWSLADTEQKGALEANEFIIAMHLIASLKKGQMRLLPNTLPPGLY 233
                 67899999999999******************************************************************8775 PP

  == domain 3  score: 57.0 bits;  conditional E-value: 5.2e-19
   EF-hand_4  10 kkyweifsglkped.nkltgdkvapvlknskleedklekiwdladidedgkldfeefciamrlifdl..vngeikdvPselPewlvpesk 96 
                  k+  if++l++ +   +tgd+v p +++skl+ed l++iwdladi++ g+l  eef++am li       +  k++Ps+lP  lvp s 
  KHJ33405.1 293 VKFDSIFNSLDKANrGFITGDEVVPFFNESKLPEDTLAQIWDLADINSAGRLSREEFAVAMYLIRLQraKRDGRKSLPSKLPANLVPPSM 382
                 58889*****98772589*********************************************9543113456799***********986 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 0.75
   EF-hand_4   12 yweifsglkpednkltgd 29  
                  +  ifsgl+ ++ +lt++
  KHJ33405.1 1166 WDSIFSGLDATEPHLTES 1183
                  3469****9999999876 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.18   5.4e+02       6      23 ..      59      76 ..      19     101 .. 0.66
   2 ?    2.9   0.0     0.051   1.5e+02       2      27 ..     184     209 ..     183     238 .. 0.81
   3 !   30.2   0.0   1.5e-10   4.5e-07       6      70 ..     297     353 ..     292     354 .. 0.89

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.18
   EF-hand_7  6 eaFkelDtdgdgyldkee 23
                e+++  D+ ++g l+++ 
  KHJ33405.1 59 EIWQIADKENRGLLTPAG 76
                445666666666666655 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.051
   EF-hand_7   2 eklkeaFkelDtdgdgyldkeellrl 27 
                 e+l +++ + Dt + g l+ +e+  +
  KHJ33405.1 184 EVLGRIWSLADTEQKGALEANEFIIA 209
                 57788899999999999999996533 PP

  == domain 3  score: 30.2 bits;  conditional E-value: 1.5e-10
   EF-hand_7   6 eaFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkly 70 
                  +F++lD+ ++g+++ +e+  ++         +skl+++ l ++++  D ++ G++s++EF  ++
  KHJ33405.1 297 SIFNSLDKANRGFITGDEVVPFFN--------ESKLPEDTLAQIWDLADINSAGRLSREEFAVAM 353
                 57****************776888........67778999*********************9888 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.53   1.6e+03       5      21 ..      26      42 ..      23      50 .. 0.79
   2 ?    1.4   0.0     0.094   2.8e+02       3      18 ..      58      73 ..      56      77 .. 0.87
   3 !    8.1   0.0   0.00071       2.1       4      27 ..     188     211 ..     185     213 .. 0.90
   4 !    5.4   0.2    0.0052        15       2      23 ..     295     316 ..     294     321 .. 0.88
   5 !   10.4   0.0   0.00012      0.37       3      27 ..     330     354 ..     328     356 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.53
                HHHHHTTTSSSEEEHHH CS
   EF-hand_1  5 iFrefDkDgdGkIdfeE 21
                +Fr +D  g G ++ e 
  KHJ33405.1 26 LFRQADSEGIGVVTGEA 42
                69*********999875 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.094
                HHHHHHHTTTSSSEEE CS
   EF-hand_1  3 keiFrefDkDgdGkId 18
                 ei++++Dk + G ++
  KHJ33405.1 58 GEIWQIADKENRGLLT 73
                69*********99987 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.00071
                 HHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1   4 eiFrefDkDgdGkIdfeEfkellk 27 
                 +i++++D+ + G ++ +Ef+ ++ 
  KHJ33405.1 188 RIWSLADTEQKGALEANEFIIAMH 211
                 79******************9996 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.0052
                 HHHHHHHHTTTSSSEEEHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfk 23 
                 ++ iF+ +Dk + G+I+ +E +
  KHJ33405.1 295 FDSIFNSLDKANRGFITGDEVV 316
                 899*****************87 PP

  == domain 5  score: 10.4 bits;  conditional E-value: 0.00012
                 HHHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1   3 keiFrefDkDgdGkIdfeEfkellk 27 
                  +i++++D +  G++++eEf  ++ 
  KHJ33405.1 330 AQIWDLADINSAGRLSREEFAVAMY 354
                 689******************9996 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.47   1.4e+03       3      20 ..      24      41 ..      22      49 .. 0.83
   2 ?    2.8   0.0     0.048   1.4e+02       4      30 ..      59      84 ..      56      85 .. 0.88
   3 ?    4.7   0.0     0.011        34       4      27 ..     188     211 ..     186     217 .. 0.89
   4 !   10.5   0.1   0.00016      0.48       1      25 [.     294     318 ..     294     323 .. 0.88
   5 ?    0.9   0.0      0.19   5.8e+02       4      25 ..     331     352 ..     328     355 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.47
   EF-hand_6  3 reaFklfDkdgdGkidae 20
                 ++F++ D +g G ++ e
  KHJ33405.1 24 GHLFRQADSEGIGVVTGE 41
                589**********99976 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.048
   EF-hand_6  4 eaFklfDkdgdGkidaeElrkalrkal 30
                e++++ Dk++ G ++++ +  +lr + 
  KHJ33405.1 59 EIWQIADKENRGLLTPAGFGIVLR-LI 84
                788999****************99.55 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.011
   EF-hand_6   4 eaFklfDkdgdGkidaeElrkalr 27 
                 +++ l D++  G + a+E++ a+ 
  KHJ33405.1 188 RIWSLADTEQKGALEANEFIIAMH 211
                 578899**************9996 PP

  == domain 4  score: 10.5 bits;  conditional E-value: 0.00016
   EF-hand_6   1 elreaFklfDkdgdGkidaeElrka 25 
                 +++++F+ +Dk + G+i+ +E++ +
  KHJ33405.1 294 KFDSIFNSLDKANRGFITGDEVVPF 318
                 5899*****************9755 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.19
   EF-hand_6   4 eaFklfDkdgdGkidaeElrka 25 
                 ++++l D +  G +++eE+  a
  KHJ33405.1 331 QIWDLADINSAGRLSREEFAVA 352
                 78899999***********765 PP

>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0     1e-08   3.1e-05       8      37 .]    1220    1249 ..    1218    1249 .. 0.95

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 1e-08
                  HHHHTTS-HHHHHHHHHHTTTSHHHHHHHH CS
         UBA    8 rLveMGFdreevveALratgnNeErAveyL 37  
                   L  MG+ r e++ AL++ ++N+E A+++L
  KHJ33405.1 1220 KLTGMGYQRTEALVALESFDYNLEKAANFL 1249
                  799**************************9 PP

>> DUF1192  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.3       4.4   1.3e+04      32      45 ..     594     607 ..     593     611 .. 0.78
   2 ?   11.9   0.3   5.9e-05      0.18      24      46 ..     628     650 ..     626     656 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 4.4
     DUF1192  32 LeaEIaRleaaiak 45 
                 L+ E +Rle ++++
  KHJ33405.1 594 LRIEAERLESTLQN 607
                 77899999998875 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 5.9e-05
     DUF1192  24 ELeerIalLeaEIaRleaaiakk 46 
                  L+erI+lL +EIa l++ ++++
  KHJ33405.1 628 NLKERISLLNSEIAQLRTLLENA 650
                 69****************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1580  (0.0881254); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.13u 0.31s 00:00:01.44 Elapsed: 00:00:00.51
# Mc/sec: 7425.98
//
Query:       KHJ33406.1  [L=299]
Description: putative 40s ribosomal protein s0 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.2e-26   91.5   0.3      2e-15   56.6   0.1    2.1  2  Ribosomal_S2  Ribosomal protein S2
    4.1e-07   31.3   5.5    7.3e-07   30.5   5.5    1.5  1  40S_SA_C      40S ribosomal protein SA C-terminus


Domain annotation for each model (and alignments):
>> Ribosomal_S2  Ribosomal protein S2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.0   2.3e-12   2.1e-08       1      98 [.      20     115 ..      20     119 .. 0.92
   2 !   56.6   0.1   2.2e-19     2e-15     147     212 ..     119     184 ..     114     186 .. 0.94

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 2.3e-12
  Ribosomal_S2   1 LLeagvhfGhqtrrwnpkmkpyIyger.ngihiidlektlaalrraykvvkevaakggkilfvgtkkqakeavkeaakrangyyvnerWlgGtLTNf 96 
                   LL+a++h+G  +++ + +m  y+ ++r +g+ ii++ kt +++  a++++   + +   i  ++ +   ++av + a+ ++++ +  r+++G +TN+
    KHJ33406.1  20 LLSAQCHIG--AKNLQVHMDGYLWKTRpDGVNIINIGKTWEKIVLAARIIAA-IDNPADICVISARSYGQRAVLKFAAHTGAVAIAGRFTPGNFTNY 113
                   89*******..5678899******999679********************86.578899999**********************************8 PP

  Ribosomal_S2  97 kt 98 
                    t
    KHJ33406.1 114 IT 115
                   65 PP

  == domain 2  score: 56.6 bits;  conditional E-value: 2.2e-19
  Ribosomal_S2 147 klPdlvvvldpkkekiavkEakklgipviaivDtnvdpdlvdypIpaNddsirsiklilgvladai 212
                   k P l+vv+dp+ +  a+kEa+ ++ipvia++Dt++ ++ vd +Ip N++   ++ li  +la+ +
    KHJ33406.1 119 KEPRLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAVGLIWWMLAREV 184
                   78************************************************************9987 PP

>> 40S_SA_C  40S ribosomal protein SA C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   5.5   8.2e-11   7.3e-07       1      85 [.     205     285 ..     205     299 .] 0.74

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 8.2e-11
    40S_SA_C   1 fFYRdPEeiekeeqaaaekalvkkeeqeewtapveftepevadWaeegvavpsvpaaaaaaaaevkaaedwsaqpatedWsaapt 85 
                 +FYRdPE +e++e  a e+++   e  +  ++p++f+++  adW++++++ + ++ aa+     ++a  +w+ ++  +dW a+ +
  KHJ33406.1 205 YFYRDPETEENKE--AIEEKVPDVEVGTSINDPTAFAAG-NADWEVSAATNSGFVGAATNV-PGAPAGISWDGAADGADWGAGAA 285
                 9***********9..45555466666799*****88765.69***9998888877766555.67889999*999999***96332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       358  (0.0199677); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 2104.04
//
Query:       KHJ33407.1  [L=433]
Description: hypothetical protein EV44_g1955 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.5e-07   28.3   7.2    8.5e-07   28.3   7.2    3.0  2  DUF2722       Protein of unknown function (DUF2722)
  ------ inclusion threshold ------
      0.013   14.9   0.7      0.023   14.2   0.7    1.3  1  Zn_peptidase  Putative neutral zinc metallopeptidase
        6.5    7.0   9.4        2.6    8.2   0.5    2.6  2  Adeno_E3      Adenovirus E3 protein


Domain annotation for each model (and alignments):
>> DUF2722  Protein of unknown function (DUF2722)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   7.2   1.4e-10   8.5e-07      90     181 ..      66     163 ..      60     186 .. 0.71
   2 ?   -6.5  13.3         3   1.8e+04     332     412 ..     263     386 ..     246     422 .. 0.43

  Alignments for each domain:
  == domain 1  score: 28.3 bits;  conditional E-value: 1.4e-10
     DUF2722  90 kLrteqErTKqeYYklEianknLeilktAlqAqiPvnlIpqlf....vgns.delseealeaqaqsgaq.aqsasqaqksqsksestglvaseqvgdt 181
                 kLr+e E+T qe  klE  + +  +l+t l+ +iP+ lIp  f     g s +  +e  ++++aq ++q +q ++  qksq   +++   ++  + dt
  KHJ33407.1  66 KLRQEEEKTRQEALKLEQRKVEQDMLNTSLREGIPPFLIPMFFagisGGSSpTTCTEMFQNQLAQVHQQqQQHQNSLQKSQLSAQAPITTNQLYQTDT 163
                 8******************************************6632122212233333445555444304445566777766666666665544444 PP

  == domain 2  score: -6.5 bits;  conditional E-value: 3
     DUF2722 332 iqfhhwkpeeeseg.......................................esssasqtkshkRrkssssfesidlnsas.eilkpaikfensaias 390
                 i fh w+p +                                           + ++  +   h++++ + +  s +    + +il+p+i +++s+  +
  KHJ33407.1 263 IHFHYWQPPTTQTEkccvhqstnslgkcktssiftlfqpssdndsppkkrktlKNQLPAPLPTHQQQQQQ-QRYSTNFSKLNtSILNPPITRQPSNTKQ 360
                 7777777765544445555555555555555555555555555555555544422222222222222222.2222233333334455555555544443 PP

     DUF2722 391 qe....keddddddddekerkkeeek 412
                 +     +e +d+ +  +++ + e+ +
  KHJ33407.1 361 IGyslgRELSDYSEPINNQCNIEKSS 386
                 33000022222222222222222222 PP

>> Zn_peptidase  Putative neutral zinc metallopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.7   3.8e-06     0.023      49     147 ..     111     211 ..      91     214 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.8e-06
  Zn_peptidase  49 llfGvdlsallglgqesstaeaaaqssegtaee..aedeqkefvsvvladtedtWtqifkekgktyqkpklvlfsrvvrsaCGtassatGPfyCPad 143
                   +  G  +++ + + q++  +  ++q++++++ +  +  +q+ ++++ l +t++  +q++++  +  q+ +  + +  ++ +C +  ++ G   CP+ 
    KHJ33407.1 111 ISGGSSPTTCTEMFQNQLAQVHQQQQQHQNSLQksQLSAQAPITTNQLYQTDTRSNQLYQTDTRSNQQYTGSVLRPLTSNSCSKQMTINGSHLCPKV 207
                   444666777777556655555555555555555115567888999***************999999999998999********************98 PP

  Zn_peptidase 144 rkvy 147
                    k y
    KHJ33407.1 208 AKSY 211
                   8877 PP

>> Adeno_E3  Adenovirus E3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   2.8     0.033     2e+02       8      80 ..     118     189 ..     111     199 .. 0.55
   2 ?    8.2   0.5   0.00044       2.6      38      68 ..     317     345 ..     274     355 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.033
    Adeno_E3   8 sygllllqpglyniyqivsktktlpliqnttns.tlplpetnkletnlkqrfsrdllesnttt...ktGGelrGlpt 80 
                 +   +++q+ l +++q  ++++    +q++  s  +p+  tn+l   + +  s +l++++t      tG  lr l +
  KHJ33407.1 118 TTCTEMFQNQLAQVHQQQQQHQN--SLQKSQLSaQAPIT-TNQL--YQTDTRSNQLYQTDTRSnqqYTGSVLRPLTS 189
                 55567888888888887776554..23333322034433.4443..3333334455555554322257877776655 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00044
    Adeno_E3  38 tnstlplpetnkletnlkqrfsrdllesntt 68 
                  + ++plp t++ + +++qr+s ++++ nt+
  KHJ33407.1 317 NQLPAPLP-THQ-QQQQQQRYSTNFSKLNTS 345
                 24466788.888.99************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1722  (0.0960455); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3044.00
//
Query:       KHJ33408.1  [L=203]
Description: putative arp2 3 complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-47  162.3   0.0    1.2e-47  162.1   0.0    1.0  1  P16-Arc   ARP2/3 complex 16 kDa subunit (p16-Arc)


Domain annotation for each model (and alignments):
>> P16-Arc  ARP2/3 complex 16 kDa subunit (p16-Arc)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.1   0.0   6.8e-52   1.2e-47       1     148 []      15     203 .]      15     203 .] 0.94

  Alignments for each domain:
  == domain 1  score: 162.1 bits;  conditional E-value: 6.8e-52
                 XXXXXXXXXXXXXX...XXXXXXXXXXXXX---GGGGTHHHHHHHHHHS--HHHHHHHTSS---S-S-HHHHHHHHHHHHHHHHTS-GGGHHHHHH... CS
     P16-Arc   1 afRkidvDaldedk...fkeeelapespeeseaevqqkesevrsllrsgdaeeALkaalknppygakeqaakeralqlvlevLssikasdiekavk... 93 
                 ++R+i++D ld+d+   f+ ++l+++  ++se+e+++  +++r+llr+gdae+AL++al+ +py+++ +++ke++l++v+evL+sikas++++++k   
  KHJ33408.1  15 NWRTINIDILDPDSstrFDPSTLHSSGVPVSEDEINSIGQQIRQLLRGGDAEGALRSALEFAPYSSS-STVKETHLATVVEVLQSIKASEMTPLLKriy 112
                 7************6689********9999************************************99.7***************************999 PP

                 ..HS-HHHHHHHHHHHHHHTT---..----..................................SHHHHHHHHHHHTT-SHHHHHHTT--X.. CS
     P16-Arc  94 ..sldkeeldvLmkYiYkgmesps..ekss..................................avLLsWhekvvevaGvgsIvrvltdrrtV 148
                   + + e+ld+LmkY+Y+gm+s    +  +                                  +vLLsWhekvve+aG+g+I r++td+r+V
  KHJ33408.1 113 hhDTGVETLDTLMKYLYRGMASYGsgK--NnsnirksaiaqqnigfpptigrhgvsnessgaamSVLLSWHEKVVETAGLGCIGRCMTDWRKV 203
                 866779**************8777443..334799********************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1529.85
//
Query:       KHJ33409.1  [L=365]
Description: putative vacuolar atp synthase subunit d [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   5.7e-108  361.4   0.0   6.4e-108  361.2   0.0    1.0  1  vATP-synt_AC39  ATP synthase (C/AC39) subunit


Domain annotation for each model (and alignments):
>> vATP-synt_AC39  ATP synthase (C/AC39) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  361.2   0.0  3.6e-112  6.4e-108       1     336 []      13     361 ..      13     361 .. 0.94

  Alignments for each domain:
  == domain 1  score: 361.2 bits;  conditional E-value: 3.6e-112
                     HHHHHHHHGGGS--HHHHHHHTTS.-HHHHHHHHHTSGGGGG--.....SSSHHHHHHHHHHHHHHHTTTGGGGS-H.HHHHHHHHHHHHHHHHH CS
  vATP-synt_AC39   1 leArvramrsglLteedyenLlqcesledvkryLketdYgnfladelseplsrsdiekalreklarefnklreqapgpsrefldyllyrydidNv 95 
                     +e++vr++r+glLt ++y+nL+qc++++d+k++L  + Yg+fl++ ++ + s+s +  + ++kl++ef++++++a+g++ +f+dy++y+y+idN+
      KHJ33409.1  13 IEGIVRGYRNGLLTGQNYSNLTQCDTIDDLKLQL-GPIYGDFLISLPP-NPSTSMLASKTTDKLISEFRYVQANAVGSLAKFMDYITYGYMIDNI 105
                     689*******************************.589*********8.5666*************************55*************** PP

                     HHHHHHHHH.T--GGGS-..--.S..S.SS-HHHHHHHHHSSSHHHHHHHHH.T-HHHHHHHH.H....HCC...--SHHHHHHHHHHHHHHHHH CS
  vATP-synt_AC39  96 klllrgklsgdldleeleeklhpl..g.elsaldldklieaksveelyeall.gtpyakylee.a....ldeleetgdleiienaLdkayledll 181
                      ll++g+l++ +d +el++++hpl  + +++ l++     a+++eely+++l +tp+a+y++  +    ldel++    ei++n+L+k+yled++
      KHJ33409.1 106 ALLITGTLHE-RDIKELLNRCHPLgwFeTMPVLSV-----ATNIEELYNSVLvETPLAPYFKGsLshedLDELNI----EIVRNTLYKNYLEDFH 190
                     *********7.666************88*******.....***********************669999999999....**************** PP

                     HH....HHTSS-HH...HHHHHHHHHHHHHHHHHHHTTTSS......T...--SS-S--HHHHHHHHTT-G.....GG..GGSSTSSTTGGGTT- CS
  vATP-synt_AC39 182 kf....ckklggetaeilreilgfeiDlrniniilrskkygelskedrkkllipggslypeglealaeaedveellaal.kyteygelleealee 271
                     +f     + +g +tae++++il+fe+D+r+ini+l+s++ +elsk+dr+kl++++g+lypeg+++l++a+dve ++ al   ++y+ ++e+a  +
      KHJ33409.1 191 NFvntnSEMSGTPTAEVMNDILEFEADRRAINITLNSFG-TELSKADRRKLYPKFGRLYPEGTQMLSRADDVEGVRLALdGVSDYKHFFESAGLA 284
                     **65432234477**************************.99************************************************76555 PP

                     ............-S..HHHHHHHHHHHHHHHHHTTTSSSTSTHHHHHHHHHHHHHHHHHHHHHHHHHHT--SHHHHGG CS
  vATP-synt_AC39 272 ............ags.lksledaldealvkllkkafrqqfsvgvfyaYlklkeqEirnlrwIaegiaqglpkekIrey 336
                                 ++s +ksled++++++++++  af+ qf+++++ya++kl+eqE+rn++wIae+iaq+ +k++I +y
      KHJ33409.1 285 qnssgagnmsggGSSdIKSLEDLFYQREMEIAAGAFTRQFTYAIVYAWVKLREQEVRNITWIAECIAQN-QKDRIGNY 361
                     789*********5555*****************************************************.*****886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2606.06
//
Query:       KHJ33410.1  [L=505]
Description: putative nucleolar protein 58 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-80  269.8   0.1    2.4e-80  269.3   0.1    1.2  1  Nop       snoRNA binding domain, fibrillarin
    1.5e-20   73.3   1.2    3.1e-20   72.3   1.2    1.6  1  NOP5NT    NOP5NT (NUC127) domain


Domain annotation for each model (and alignments):
>> Nop  snoRNA binding domain, fibrillarin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  269.3   0.1   2.7e-84   2.4e-80       1     208 [.     173     389 ..     173     415 .. 0.90

  Alignments for each domain:
  == domain 1  score: 269.3 bits;  conditional E-value: 2.7e-84
                 HHHHHHHHHHHHHHHHHHHHTTTSTCHHHHS-SHHHHHHHHHHCCCCHCCT.HHTT.HH..HHHHHHHHHHCHHHH-SSS-S-HHHHHHHHHHHHHHHH CS
         Nop   1 lldeidkeintlhkrvrewYswhFpELeslvkdnleYakvvkligneredlekkeedee..lakevimaakvtastsmgaelseedlknikelcdrvle 97 
                 lld++dke+nt+++rv+ewY+whFpE+ ++++dnl+Ya+v+ + g  r++++k++  ++  l++e+ +++k +a+ smg+e+++edl+ni+ l+++v+ 
  KHJ33410.1 173 LLDDLDKELNTYAMRVKEWYGWHFPEMGKILNDNLAYARVILKSG-MRQNCSKTD--LSdiLPEEIEATIKAAAEVSMGTEITDEDLENIQLLAEQVVG 268
                 689******************************************.999*98874..3345999999999999999*********************** PP

                 HHHHHHHHHHHHHHHHHHHSHHHHHHCHHHHHHHHHHHHSSHHHHHCS-HHHHTTTT-HHHHCCCHH.T---SSSCHHHCSHHHHHTS-CCCHHHHHHH CS
         Nop  98 leelrkelleYlesrmsaiAPNlsaLvGeevaarLishaGgLtnLakmPastiqilGaekalfralk.kkntpkyGliyhselvqkatppklkkkiaRl 195
                 ++e+r++l++Yl+ rm+aiAPNl+++vGe v+arLi+h G+L+nLak PastiqilGaekalfralk k++tpkyGliyh++lv++a + k+k+kiaR+
  KHJ33410.1 269 FTEYRQQLSSYLTARMNAIAPNLTQMVGELVGARLIAHSGSLMNLAKSPASTIQILGAEKALFRALKtKHDTPKYGLIYHASLVGQA-TGKNKGKIARM 366
                 *******************************************************************888***************77.99********* PP

                 HHHHHHHHHHHH..........H CS
         Nop 196 laaKvalaaRiD..........a 208
                 laaK+a+ +R+D           
  KHJ33410.1 367 LAAKAAIGIRVDalsdwsaegeG 389
                 ************55444433330 PP

>> NOP5NT  NOP5NT (NUC127) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   1.2   3.5e-24   3.1e-20       1      65 []       5      69 ..       5      69 .. 0.98

  Alignments for each domain:
  == domain 1  score: 72.3 bits;  conditional E-value: 3.5e-24
      NOP5NT  1 fiLfEtaaGYaLfkv.kdkkllkkddlvkdsvsdlekfsklvkLkaFqkFesaaeALenanaiseG 65
                fiL Et+aGYaL+k+ k +kllkk+dlv++ v ++e +++l+kLk+F+kF+saa+ALe+++a++eG
  KHJ33410.1  5 FILSETSAGYALLKSrKGTKLLKKTDLVDE-VGTAEGINELLKLKNFVKFDSAATALEEVAALVEG 69
                9**************7778***********.**********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1139  (0.0635284); expected 358.6 (0.02)
Passed bias filter:                      588  (0.032796); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 3654.69
//
Query:       KHJ33411.1  [L=310]
Description: putative ribosomal protein s15 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-23   83.0   0.4    6.3e-23   80.8   0.2    2.1  2  Ribosomal_S15  Ribosomal protein S15


Domain annotation for each model (and alignments):
>> Ribosomal_S15  Ribosomal protein S15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.11   1.9e+03       4      14 ..     190     200 ..     187     201 .. 0.83
   2 !   80.8   0.2   3.5e-27   6.3e-23       6      80 ..     221     299 ..     217     300 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.11
                    HHHHHSSSTT- CS
  Ribosomal_S15   4 likefqrhekD 14 
                     i++f+rh++D
     KHJ33411.1 190 CIEKFGRHNTD 200
                    499******98 PP

  == domain 2  score: 80.8 bits;  conditional E-value: 3.5e-27
                    HHHSSSTT-TSSHHHHHHHHHHHHHHHHHHHHC..TTT-HHHHHHHHHHHHHHHHHHHHHHHH-H..HHHHHHHHHCTS CS
  Ribosomal_S15   6 kefqrhekDtGspevqiallterInnltehlke..nkkDkhsrrgLlklvskRrkllkYLkrkdv..erYkklieklgl 80 
                    ++  r+  DtGs+evqia+lt++I+ l + l+    kkDk ++r+L++lv++R+kllkYL+rk++   r+k+l+++lgl
     KHJ33411.1 221 EKCPRAGPDTGSSEVQIAILTAKIRVLANNLELagAKKDKINKRNLRLLVHRRQKLLKYLRRKERggGRWKHLVNTLGL 299
                    56678889*********************98876689*****************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       659  (0.0367561); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2470.03
//
Query:       KHJ33412.1  [L=348]
Description: putative methyltransferase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.7e-09   36.3   0.0    1.4e-08   35.3   0.0    1.6  1  Methyltransf_11  Methyltransferase domain
    6.6e-08   32.6   0.0    1.1e-07   31.8   0.0    1.3  1  Methyltransf_23  Methyltransferase domain
    1.4e-06   28.9   0.0    3.5e-06   27.6   0.0    1.7  1  Methyltransf_25  Methyltransferase domain
      3e-06   27.9   0.0    6.2e-06   26.9   0.0    1.6  1  Methyltransf_12  Methyltransferase domain
    0.00065   19.5   0.0     0.0045   16.8   0.0    2.1  2  Methyltransf_31  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   3.8e-12   1.4e-08      20      92 ..     119     191 ..      86     195 .. 0.71

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 3.8e-12
                      EEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCCTSS-TT-EEEEEEES-CCC-CCHHHHHHHHHHHEEEEE CS
  Methyltransf_11  20 rvvgvDlskemlklakekaseeglkvefvvadaeklpfednsfDlvvssevlhhvedpekalkeiaRvLkpgG 92 
                      r+++ + s ++l++  +   ++++++     d+e+lp++ nsfD+v+ss+++h+++++ ++l++i  +Lkp+ 
       KHJ33412.1 119 RITAAESSGKLLNRDADLPFNKEIHLCREIIDMENLPYNPNSFDAVLSSMSMHWINELPSVLSQINNILKPDA 191
                      44455545555533322222222233336789***************************************96 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.0   3.1e-11   1.1e-07      11     164 ..      70     247 ..      53     248 .. 0.65

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 3.1e-11
  Methyltransf_23  11 dklerllpklraggrvLdiGcGtGillevl.reng.............fsvtgvDlspeaveiae............kakkaqkdqfdeqeaae 78 
                      +++ rl + +r+   +Ld+G+++ + ++ l ++n+               +t+ + s ++ ++ +            +++ ++       + ++
       KHJ33412.1  70 RLVGRLHDIKRQFPHILDFGANSCNIARALtQKNPysnpgdsllstkiLRITAAESSGKLLNRDAdlpfnkeihlcrEIIDME-------NLPY 156
                      33344445578888999999999999999944444222223332222135555555555444433554333322222222222.......3333 PP

  Methyltransf_23  79 pqgkfdlIvlrevlehvpdppellrqiatllkpgGylllseplasl.kedrllldwlylvpag...rhi.sffsarslkelleeaGlevve 164
                      + ++fd + ++++++++  +p++l+qi+++lkp++ +l  + + +   e+r  l+ + +  +g    hi  + + r+++ ll++aG+++++
       KHJ33412.1 157 NPNSFDAVLSSMSMHWINELPSVLSQINNILKPDAPFLAAMLGGDTlFELRTSLQLADQERRGgisPHIsPLADVRDMGGLLQKAGFKMLT 247
                      888**************************************98776445555555554444555776777999**************9876 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0   9.9e-10   3.5e-06       1      96 [.      85     190 ..      85     190 .. 0.72

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 9.9e-10
                      EEEET-TTSHHHHHHHCT............STSSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakr............lgkakvtgvDiseemleaareraeeeglnvefvqgdaedlpfedgsfDlvvssgalhhlsdedl 82 
                      +Ld+G+ + ++++al ++             +  ++t+ + s ++l++ +    ++++++  +  d+e+lp++ +sfD+v+ss+++h+++  +l
       KHJ33412.1  85 ILDFGANSCNIARALTQKnpysnpgdsllsTKILRITAAESSGKLLNRDADLPFNKEIHLCREIIDMENLPYNPNSFDAVLSSMSMHWIN--EL 176
                      56666666666666666655554444432213466677777777776665555556666667889*****************99999988..89 PP

                      HHHHHHHHHHEEEE CS
  Methyltransf_25  83 ekalkeiarvLkpg 96 
                      + +l++i ++Lkp+
       KHJ33412.1 177 PSVLSQINNILKPD 190
                      ************96 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   1.7e-09   6.2e-06       1      97 [.      86     191 ..      86     193 .. 0.90

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 1.7e-09
  Methyltransf_12   1 LeiGcGtGsllrallekl............pdieytgvDispsai.edakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhlkd 81 
                      L++G+++ +++ral +k+            + +++t+ + s + +  da   ++k++ ++ + ++ e+l       ++sfD+v++s  +h++++
       KHJ33412.1  86 LDFGANSCNIARALTQKNpysnpgdsllstKILRITAAESSGKLLnRDADLPFNKEIHLCREIIDMENLPYN----PNSFDAVLSSMSMHWINE 175
                      8****************************99**************778888888888888777777777743....35**************** PP

  Methyltransf_12  82 irevldnirklLkpgG 97 
                      + +vl++i + Lkp++
       KHJ33412.1 176 LPSVLSQINNILKPDA 191
                      **************97 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.48   1.7e+03       7      53 ..      85     105 ..      80     112 .. 0.60
   2 !   16.8   0.0   1.2e-06    0.0045      62     109 ..     147     195 ..     131     218 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.48
  Methyltransf_31   7 vlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgl 53 
                      +lD G+++ ++                          Ar+ +qk+ +
       KHJ33412.1  85 ILDFGANSCNI--------------------------ARALTQKNPY 105
                      45555555555..........................5555555554 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 1.2e-06
  Methyltransf_31  62 dieelekl.ledekfDlilsnevlnaladpdkileeiervlkpggilli 109
                      +i ++e+l +++++fD +ls   ++ +++++++l +i + lkp+  +l+
       KHJ33412.1 147 EIIDMENLpYNPNSFDAVLSSMSMHWINELPSVLSQINNILKPDAPFLA 195
                      455566666**********************************987775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2773.01
//
Query:       KHJ33413.1  [L=930]
Description: putative ap-2 complex subunit alpha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-97  326.2   6.8    4.7e-97  325.7   6.8    1.1  1  Adaptin_N        Adaptin N terminal region
    2.9e-44  149.8   0.0    8.3e-44  148.4   0.0    1.8  1  Alpha_adaptin_C  Alpha adaptin AP2, C-terminal domain
    3.9e-15   56.1   0.0    8.8e-15   55.0   0.0    1.6  1  Alpha_adaptinC2  Adaptin C-terminal domain
  ------ inclusion threshold ------
      0.023   14.8   0.3       0.24   11.5   0.1    2.5  2  Xpo1             Exportin 1-like protein
      0.088   11.3   3.4      0.055   12.0   1.2    1.7  2  Proteasom_PSMB   Proteasome non-ATPase 26S subunit
       0.13   12.4   0.8       0.43   10.8   0.2    2.2  2  RTP1_C1          Required for nuclear transport of RNA pol II


Domain annotation for each model (and alignments):
>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  325.7   6.8  1.6e-100   4.7e-97      82     521 ..      56     523 ..      47     526 .. 0.94

  Alignments for each domain:
  == domain 1  score: 325.7 bits;  conditional E-value: 1.6e-100
                 HHHHHHCCSSSHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHT-SSH..HHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCTT-SSHHHHHHHHHHHHH CS
   Adaptin_N  82 nslqkDlkdpnqlirglALrvLssirvpelaedlapaikkllkdrsp..yvrkkAalailklykkdpdllrkqlveeikellsdkdpgvvlaAvallee 178
                 ++++kDl+d n+l+ +lAL+++++++ +e+ e+l +++ +ll ++++  +v+kkAal++l+ly+  pd++++q++e+i++l++d d+gv l++++l   
  KHJ33413.1  56 QCIRKDLEDHNELFNCLALNAIANVGGREMGEALSNEVHRLLISPTSksFVKKKAALTLLRLYRRHPDIVQPQWAERIISLMDDIDMGVALSVTSLVMA 154
                 579****************************************999889************************************************** PP

                 H.HCCCCCCCHHHHHHHCCHHHHH............HCS-HHHHHHHHHHHCC---SSHHHH..HHHHHHHCGGCG............CSSCHHHHHHH CS
   Adaptin_N 179 i.kkndrlllkllpklvrrLcnll............teldpwlqvkiiklltrlarqepeerskkellesllnllq............ssnnaVlletv 252
                 + + +++l++    k ++r++++l             ++ pw+qvk+++ll+ + ++e++    +++ esl++ l+            +++naVl+e++
  KHJ33413.1 155 LaQDHPDLYKGSYVKAASRMKRILidneyasdylyyRVPCPWIQVKFLRLLQYYPASEDSHIR-DLIRESLQKILNlalempknvqqnNAQNAVLFEAI 252
                 *77777777788889999**************************************9998884.3444455555556679******************* PP

                 HHCCHCCCCSTHHHCCHHCHHHHHHSSCCTCHHHHHCHHHHHHHHX..XTTTT.TTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHHHHHHHHHHT CS
   Adaptin_N 253 nlivelapknelivlavnaLvrllsskdenlryvaLrtllkivkke..pkavq.hldlkifllktdddvsirlkaldlllklvdesNvkeivkeLkkyv 348
                 nli++l+ +++l++++  +L+++++s+++n+ry+ L+++ +++ +    + ++ h+ +++ +lk d+d+s+r+k ldll+ ++d+sN++ iv eL+ y+
  KHJ33413.1 253 NLIIHLDTEQALMEQISHRLGKFIQSRETNVRYLGLEAMTHLAARAetLDPIKqHQSIILSSLK-DRDISVRRKGLDLLYSMCDQSNAQPIVGELLLYL 350
                 *******************************************99866567778**********.********************************** PP

                 TSSXXHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTXXHHHHHHHHHHHHHHHHHSTTTSTTCHHHHCCTCCG.XXSHHHHHHHHHHHHHTTTTX CS
   Adaptin_N 349 kevadedfksklvkaIgrlaekfatdaewvldvllellslsgesvkdeivevirdliqkvpelheeiiekLaellek.ieseearaaaiWllGeygelv 446
                  + ad  +++++v +I++l+ek+atd++w++d+ l+l+s +g++v+d+++++i+++i+++++l+ ++++++++++++  ++e++++   ++lGe+g l+
  KHJ33413.1 351 -QNADFAIREEMVLKIAILTEKYATDVQWYVDITLRLISMAGDHVSDAVWHRIIQIITNNEDLQVYAAQNVLQFIKTdFCHETLVKIGGYILGEFGHLI 448
                 .666888******************************************************************************************** PP

                 TT.....HHHHHHCTTTTTTTSXHHHHHHHHHHHHHHHHCXGCC.THXHHHHHHHHHHHXXSHHHHHHHHHHHHHHC CS
   Adaptin_N 447 sn.te.sasdllrslaekfvlesekvklqiltalvKlyltspdketqekliqlvlslatssdlevrdRaveylqlls 521
                  +  + s+ +++  l++k++ ++  +k+ il++++K+ +++p  e++++l+ +++ +++++d e+++Ra+eyl l s
  KHJ33413.1 449 AEdPNcSPIEQFMALQSKLHGCTSSTKAIILSSFIKFVNLFP--EIKPRLLCVFKAYSHTLDPELQQRACEYLALAS 523
                 *964578999********************************..7999*************************9976 PP

>> Alpha_adaptin_C  Alpha adaptin AP2, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.4   0.0   2.8e-47   8.3e-44       1     107 [.     781     890 ..     781     896 .. 0.96

  Alignments for each domain:
  == domain 1  score: 148.4 bits;  conditional E-value: 2.8e-47
  Alpha_adaptin_C   1 FleptelssedFfkrWkqlggapreaqkifklk...aaekeideetvrkvleGfrlavlenvdpnpenivgagvlhtsesgkvgcLlrlepNkq 91 
                      F+ep+elss+dFfkrWkq+ggapreaq+if+lk   ++++  + +++rk  eGfr+++l++vdpn++nivga+vlhtse gk+gcLlrlepN+ 
       KHJ33413.1 781 FMEPAELSSDDFFKRWKQIGGAPREAQRIFGLKngkDKDRVFTDSFIRKTAEGFRWGILDGVDPNKNNIVGASVLHTSECGKFGCLLRLEPNYG 874
                      9*******************************988889999***************************************************** PP

  Alpha_adaptin_C  92 akmvrltiRatkeavp 107
                      ++m+rltiRat+e+v 
       KHJ33413.1 875 TQMIRLTIRATDESVL 890
                      *************996 PP

>> Alpha_adaptinC2  Adaptin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.0   0.0     3e-18   8.8e-15       2     111 .]     669     775 ..     668     775 .. 0.89

  Alignments for each domain:
  == domain 1  score: 55.0 bits;  conditional E-value: 3e-18
                      EEEEEEETTEEEEEEEEETTSTTEEEEEEEEEE-SSS-EEEEEEEEEEBTTCEEE.EEEES-S-B-.TTCEEEEEEEEEEESCTTS-EEEEEEE CS
  Alpha_adaptinC2   2 evvlyekddlqIgfkfekperpgqiritlsftNkssqpisnfsfqaavpkslklq.lqppsstvlp.pnpggqitqvllienpskkplrmrlri 93 
                      e++lye+ ++qIg+++e+  r++++++ ++f+Nk+++ +++f+++++   s k +   ++++  +    +g q +q++++e+++ ++ ++++ri
       KHJ33413.1 669 EGILYEDGQIQIGIRSEY--RGQMACVIIYFSNKAPSALTSFTTTFDLDPSEKNNlTWEMKGLPETtLYSGSQSQQMIMFEAKRIFEKSPTVRI 760
                      799***************..****************************9999999545666666664449************************ PP

                      EEECTCEEEEEEEEEEE- CS
  Alpha_adaptinC2  94 sykvgqaikeqidvlkfp 111
                      sy+   a++ q  +lk+p
       KHJ33413.1 761 SYL---AGALQALTLKLP 775
                      ***...777887777776 PP

>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.28   8.3e+02       2      37 ..     104     142 ..     103     161 .. 0.77
   2 ?   11.5   0.1     8e-05      0.24      67     116 ..     211     277 ..     206     298 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.28
                 HHHHHHHHHHHHHHHHHHT...TTTSTTHHHHHHHHHCT CS
        Xpo1   2 kflrnklaealaelflqey...pnnWpsffddllsllss 37 
                 +f+++k a++l +l+++     + +W + + +l++ + +
  KHJ33413.1 104 SFVKKKAALTLLRLYRRHPdivQPQWAERIISLMDDIDM 142
                 799*************99777788888888888877665 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 8e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC.................HHHHHHHHHHHHHHHHTT CS
        Xpo1  67 errndlkdllrsnvqkilelllqileqsqskk.................qsselveavLkclsswvs 116
                 +++++++dl+r+++qkil+l l++ ++ q+++                 +++ l e++ + l+++++
  KHJ33413.1 211 SEDSHIRDLIRESLQKILNLALEMPKNVQQNNaqnavlfeainliihldTEQALMEQISHRLGKFIQ 277
                 67899***********************998865555555555555555555555555555555555 PP

>> Proteasom_PSMB  Proteasome non-ATPase 26S subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0      0.75   2.2e+03     201     230 ..     130     159 ..     114     162 .. 0.84
   2 ?   12.0   1.2   1.8e-05     0.055     131     229 ..     236     336 ..     216     344 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.75
  Proteasom_PSMB 201 lekllkeldgeDvLvqldalelltelAegk 230
                      e++++ +d+ D+ v l++  l+  lA+ +
      KHJ33413.1 130 AERIISLMDDIDMGVALSVTSLVMALAQDH 159
                     688999999999999999999999999854 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 1.8e-05
  Proteasom_PSMB 131 kalreedlsvae..eairllskllkqeagleelkskLkallkr.ndivRariYelavelakkSaealsivtellekllkeldgeDvLvqldalel 222
                     k ++++++++a   eai+l+ +l  ++a +e+++++L + ++  +  vR+   e +++la+  ++ l+ +++  + +l++l+++D+ v+ + l+l
      KHJ33413.1 236 KNVQQNNAQNAVlfEAINLIIHLDTEQALMEQISHRLGKFIQSrETNVRYLGLEAMTHLAARAET-LDPIKQHQSIILSSLKDRDISVRRKGLDL 329
                     6667777777753389*********************9998875888*************98765.5555558999******************* PP

  Proteasom_PSMB 223 ltelAeg 229
                     l ++  +
      KHJ33413.1 330 LYSMCDQ 336
                     *998874 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.8   5.5e+03      23      73 ..     114     161 ..     101     163 .. 0.64
   2 ?   10.8   0.2   0.00014      0.43       8      80 ..     276     347 ..     270     375 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.8
     RTP1_C1  23 LrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLadvfpe 73 
                 L +l +++   + + +++ ++ +++ + d d  v L++ +++ aLa+ +p+
  KHJ33413.1 114 LLRLYRRH---PDIVQPQWAERIISLMDDIDMGVALSVTSLVMALAQDHPD 161
                 33333333...4567777777777777788887888888888888877765 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00014
     RTP1_C1   8 lqdpllpvrahglvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLadvfpee.vlklLl 80 
                 +q+ +  vr  gl  +++l+ + +  ++  i++  +++l++Lkd d  v  +   +L +++d  +++ ++ +Ll
  KHJ33413.1 276 IQSRETNVRYLGLEAMTHLAARAE--TLDPIKQHQSIILSSLKDRDISVRRKGLDLLYSMCDQSNAQpIVGELL 347
                 899999**************9998..9999999999**********9999999999999999876541455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (930 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.42
# Mc/sec: 6615.79
//
Query:       KHJ33414.1  [L=500]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.074   13.5   0.1       0.16   12.4   0.1    1.5  1  NPV_P10   Nucleopolyhedrovirus P10 protein
        1.4    9.4   4.8        7.8    6.9   0.1    2.7  2  eIF3g     Eukaryotic translation initiation factor 3 subunit 


Domain annotation for each model (and alignments):
>> NPV_P10  Nucleopolyhedrovirus P10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   1.8e-05      0.16      30      66 ..      13      50 ..       7      62 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.8e-05
     NPV_P10 30 vqenlpdvtelnekLd.aqsaqLaeletkvenIqdiLn 66
                + ++l d+t + ++L+ a  a L++  t ++nI++iL 
  KHJ33414.1 13 LPKELADITAIRQRLErAWRARLQTCTTMISNIDSILA 50
                678999*********945799****************8 PP

>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.1   0.00087       7.8      97     120 ..     314     336 ..     291     339 .. 0.81
   2 ?    2.8   1.2     0.017   1.5e+02     104     114 ..     357     367 ..     348     377 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.00087
       eIF3g  97 lkkkekklvkCriCkgdHfTskCP 120
                  k k++ +  C+ C+g+H T +C 
  KHJ33414.1 314 FK-KQQPIEFCKRCNGHHPTKNCS 336
                 45.4567789*************5 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.017
       eIF3g 104 lvkCriCkgdH 114
                 + kCr+C+g H
  KHJ33414.1 357 TTKCRNCGGPH 367
                 479******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3419.34
//
Query:       KHJ33415.1  [L=134]
Description: hypothetical protein EV44_g0538 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       319  (0.0177924); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1007.68
//
Query:       KHJ33416.1  [L=380]
Description: putative er membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-08   34.1  10.0    5.7e-08   32.9  10.0    1.7  1  WSC       WSC domain
  ------ inclusion threshold ------
      0.092   12.7   0.1       0.19   11.8   0.1    1.4  1  FixQ      Cbb3-type cytochrome oxidase component FixQ
        0.4   10.2   2.3       0.66    9.5   2.0    1.5  1  Stevor    Subtelomeric Variable Open Reading frame


Domain annotation for each model (and alignments):
>> WSC  WSC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9  10.0   9.5e-12   5.7e-08      13      82 .]      37     100 ..      29     100 .. 0.88

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 9.5e-12
         WSC  13 rllgpssasdstmtpekCaafCkakgykyagledgseCyCgnslpaaavkassssCnasCsGdssqtCGg 82 
                 ++++++s+s+  ++++ C++fC  + y++a+l+++ +C+C+n +pa+++      C+ +C+G++ + CGg
  KHJ33416.1  37 NTSDSNSNSSVYQSNGLCSDFCI-QDYAFAILQNQ-NCWCSNYFPASTTTG----CTLKCPGYPFEKCGG 100
                 5677889999999*********9.67*******88.*********965544....**************8 PP

>> FixQ  Cbb3-type cytochrome oxidase component FixQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   3.1e-05      0.19       5      34 ..     232     261 ..     229     265 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.1e-05
        FixQ   5 alrgfadswgllflvllfygvviyafrpgn 34 
                 + +++a ++gl++lv++f+ +v+  +r ++
  KHJ33416.1 232 TGAAVALTAGLVILVAVFCSLVYLYLRRQK 261
                 6678999*************9998888877 PP

>> Stevor  Subtelomeric Variable Open Reading frame
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   2.0   0.00011      0.66     164     265 ..     163     265 ..     146     267 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00011
      Stevor 164 tliglaaakaaavaakvalsaealkklasslsilnlfsesslesalk..aavsaaaasdlagtaasaassafepygiaalvllilavvliiLYiwlyrR 260
                 +l +  +++++ +++ +a+s ++l+ + + ++ ++ +s s l+ +++  a  s+++   l++++a++  ++  + +++a +++++av   ++Y++l+r 
  KHJ33416.1 163 SLSSSSLTSTTGISS-TATSVTSLTWTPTPVTSIKTISGSGLTVTVTptAPPSSSTSIALSQNVAKTGLTTGAAVALTAGLVILVAVFCSLVYLYLRRQ 260
                 444444444444444.4555555555666677777777777777777545566677777777888889999999999999999999999*********9 PP

      Stevor 261 RKnSw 265
                 + nS 
  KHJ33416.1 261 KENSL 265
                 99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1051  (0.0586201); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 2839.68
//
Query:       KHJ33417.1  [L=704]
Description: putative amp-binding enzyme [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.3e-81  273.1   0.0      4e-81  272.8   0.0    1.1  1  AMP-binding  AMP-binding enzyme


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  272.8   0.0   2.2e-85     4e-81      16     422 ..      80     552 ..      65     553 .. 0.80

  Alignments for each domain:
  == domain 1  score: 272.8 bits;  conditional E-value: 2.2e-85
                  E.........CCSTEEEEHHHHHHHHHHHHHHHHH....TTSSTT-E.EEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEEE CS
  AMP-binding  16 d.........sgegqtlTYreldervnrlAagLrs....lGvkkgdr.VaillpnspewvvallailkaGavvvplnptltaeelayiledseakvli 99 
                  +         +++++ +TY+e+  r  ++++gL +    lG+++++  V+i+++n+pew +a+la+++ ++  v l++tl++e+ ++i+ +s+  ++i
   KHJ33417.1  80 SrswnvasqsYDDYKFITYGEVAIRKGNFGKGLVElhqnLGITDEKYgVGIWSQNRPEWQIADLACMSQSLYSVSLYDTLGPEATEHIIVNSDLVCVI 177
                  2444455556789********************842333577655558************************************************** PP

                  ETCTCCC.HHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS.....................-TSCCCS-BTTSEEEEEEE--SSSS-E CS
  AMP-binding 100 atvdsel.leklleaaakleavklvivldadellkeeelkeeeeseekae.....................kpeeeeelkpddlayiiYTSGTTGkPK 175
                     +s++ +++ll+ a+++++ kl+i+ d+ +    e+  ++++   + +                      + + ++++p+dl++i YTSGT G PK
   KHJ33417.1 178 ---SSIDhISALLKLAPRVPKLKLIICFDSLDDG--ERPGSSKKIILN-DiakdsnikiysmkevealgvnSKIPFNPPRPNDLITINYTSGTSGIPK 269
                  ...4566689999999988888888888865544..333333333322.134567899999**********5557889******************** PP

                  EEEEEHHHHHHHHHHHH.HHHCSCCTTT-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHH..... CS
  AMP-binding 176 GVmlshrnlvanvaslk.letrfklkeddvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvleal..... 267
                  GV l+h+n++a ++s+  + t+  l ++++++s+lplahif+  +++ +++++G++++++++d       l++++++l++  ++gvPr+++++     
   KHJ33417.1 270 GVALTHANAMAGICSARtIATT--L-PSETLISYLPLAHIFER-VAEQGCFMVGSSIGYFRGDVL----GLVDDMKTLHPAGFVGVPRLFNRFgsvir 359
                  ***************7543332..3.689*************6.*****************9998....257*********************88865 PP

                  ...HHCCCHHCHHHHC........................................CGTT-SEEEEESS-EBHHHHHHHHHHHTCEEEEEEEEGGGSS CS
  AMP-binding 268 ...lesgalkaakkak........................................dlsslrlvllggeplspellrffralfgeevlegYGlTEttg 322
                     +e+ +++                                               l  l  +++g +pl p++++f+ra f +++ +gYGlTEt +
   KHJ33417.1 360 artVEATDFS-----GmiarhiinakiaklelppgqatvkhliydyilarklrtsvGLENLNCMVTGSAPLDPNVMQFLRAAFARPFCQGYGLTETYA 452
                  5552222222.....012222334444555555555555555666655544444444445555899******************************** PP

                  ECEECHCTTTCTSTTS-BEE-TTEEEEEE-TTTSCBEETTSE...EEEEEEETTS-SEBTT-HHHHHHHEEETCCEEEEEEEEEEETTSEEEEEEECC CS
  AMP-binding 323 vvtvlpleedkkklgsvGkplpgvevkivDeetgepvpdgee...GellvrgpgvmkgYlkkpeataeafdsegrwlrTGDlgrldedGyleivgRkk 417
                    t +++ +d  ++g +G + p  e+ +    ++e++ ++ +   Gell+rg++v++ Y+k+p++t++a+  +++++rTGD++++d  G+++i++R+k
   KHJ33417.1 453 LGT-CQHAND-FTVGNCGMVAPSLEICLQSIPEMEYLVTDSPyprGELLIRGHSVFREYHKDPAETQRALL-PDGFFRTGDIAEIDNLGRIKIIDRLK 547
                  **9.774555.7899**********************98888888*************************9.767***********99********** PP

                  CEEEE CS
  AMP-binding 418 dlikl 422
                  +++kl
   KHJ33417.1 548 NVLKL 552
                  ***98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (704 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       277  (0.0154498); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 5291.93
//
Query:       KHJ33418.1  [L=195]
Description: hypothetical protein EV44_g3414 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       408  (0.0227564); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1484.70
//
Query:       KHJ33419.1  [L=518]
Description: putative diacylglycerol acyltransferase dgat2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-22   78.9  14.1    6.4e-22   78.4  14.1    1.4  1  MBOAT     MBOAT, membrane-bound O-acyltransferase family
     0.0036   17.5   0.6       0.01   16.1   0.6    1.8  1  MBOAT_2   Membrane bound O-acyl transferase family
  ------ inclusion threshold ------
      0.018   15.1   2.3      0.018   15.1   2.3    2.2  2  Pox_I5    Poxvirus protein I5


Domain annotation for each model (and alignments):
>> MBOAT  MBOAT, membrane-bound O-acyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.4  14.1   1.1e-25   6.4e-22     103     338 ..     276     492 ..     186     503 .. 0.83

  Alignments for each domain:
  == domain 1  score: 78.4 bits;  conditional E-value: 1.1e-25
       MBOAT 103 lllvGPilsyseymsfvesplsrllytakrnfavalyalflgltylilieyvlskicakdftifkmlssaqllmrsvimrilllllllfllifdflglw 201
                 ++  +P+l y+    ++++p +r+ +      + +  +++l ++ +i+  +  + +  + +++ + l+  ++l+r +   ++ l+++l  ++  f +  
  KHJ33419.1 276 YFWWAPTLVYQP--VYPRTPKIRWIFV----AKRLAEVFSLNAFMWIASAQYAAPVLRNSLDKIATLDLISILERLMKLSTISLVIWLAGFFALFQS-F 367
                 456789999995..99********986....5566666777777799999999999********************************998777776.5 PP

       MBOAT 202 lvalgedilsGlgvngarldrvadrniygdwenavsfsefwraWNipvhkWLlryvYkplgskkfklnkslatlatFlfsAvwHglalgyliwfvlrvl 300
                 l+al+e++++G            dr +y+dw+n+ s+  +wr+WN pv+ + +r++Y pl s         a +++FlfsAv H+l  g+  +   +++
  KHJ33419.1 368 LNALAEIMRFG------------DREFYKDWWNSPSVGVYWRTWNKPVYHFMKRHIYMPLIS--QQGGAKKANIIVFLFSAVLHELLVGI-PTHNIIGV 451
                 ***********............99***********************************63..3333467889************9955.45888999 PP

       MBOAT 301 lllveklimrlvalsnlkfdr...rrailsnvifwlgaflg 338
                 +++  +l+ +lva +   +     + +il+n ifw+++ l+
  KHJ33419.1 452 AFMGMMLQLPLVAITAPLEKIkgiNGKILGNCIFWISFTLI 492
                 99999999999997776654311145678888888876543 PP

>> MBOAT_2  Membrane bound O-acyl transferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.6   1.7e-06      0.01       4      67 ..     382     441 ..     380     455 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.7e-06
     MBOAT_2   4 lfgslleayslrrfWgrfWHqlfrrglkstakkilrlllgsklarylqllvaFllSGllHaagd 67 
                 ++++++++ s+  +W r+W++ + +++k++++ +l +++g       + +++Fl+S++lH+++ 
  KHJ33419.1 382 FYKDWWNSPSVGVYW-RTWNKPVYHFMKRHIYMPLISQQGG---AKKANIIVFLFSAVLHELLV 441
                 78999**********.789***************9999997...2348899*********9865 PP

>> Pox_I5  Poxvirus protein I5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   2.3     3e-06     0.018      14      73 ..      87     144 ..      77     146 .. 0.86
   2 ?   -0.8   0.1      0.28   1.7e+03      51      74 ..     348     371 ..     331     372 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3e-06
      Pox_I5  14 lLmllmvisggalvvkeiaPyrlltlrsatanrvvrvlelvailifiPGtiiLYaaYvrk 73 
                 l++l++++ ++ l++ +++ y +l+    +  r   +l  va+l++iP+ +  + aYv +
  KHJ33419.1  87 LMVLVLIVGNLRLMMENFKKYGVLICVQCHNYRSQDILLGVALLLVIPCHL--FLAYVVE 144
                 456667888899*************************************85..5588765 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.28
      Pox_I5  51 lelvailifiPGtiiLYaaYvrkL 74 
                 l  ++++i + G  +L+ +++ +L
  KHJ33419.1 348 LSTISLVIWLAGFFALFQSFLNAL 371
                 567888899999999988887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       774  (0.0431703); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3696.03
//
Query:       KHJ33420.1  [L=647]
Description: putative wd repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.8e-32  110.8  22.8    3.4e-06   27.7   0.0    7.6  7  WD40         WD domain, G-beta repeat
    1.8e-13   50.6   0.1       0.53   10.6   0.0    6.0  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0096   15.8   0.0       0.22   11.4   0.0    2.4  2  eIF2A        Eukaryotic translation initiation factor eIF2A


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0   0.00079       4.7      10      38 .]      99     126 ..      86     126 .. 0.82
   2 !   17.3   0.2   1.1e-06    0.0063       6      37 ..     135     167 ..     130     168 .. 0.86
   3 !   27.7   0.0   5.8e-10   3.4e-06       2      38 .]     172     209 ..     171     209 .. 0.93
   4 !   23.1   0.9   1.5e-08   9.2e-05       5      38 .]     217     251 ..     213     251 .. 0.89
   5 !   13.7   0.0   1.5e-05      0.09       1      38 []     255     294 ..     255     294 .. 0.81
   6 !   10.4   0.1   0.00016      0.95       7      34 ..     304     333 ..     299     336 .. 0.72
   7 !   20.8   0.9   8.3e-08    0.0005       8      37 ..     375     405 ..     364     406 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00079
                 SSSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  10 HssvtslafspdgawlasGsdDgtvriWd 38 
                 H +v+ +a+ p+g+ l++Gs  g   +W+
  KHJ33420.1  99 H-PVNVVAWTPEGRRLLTGSSSGEFTLWN 126
                 5.6999*************9899999997 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 1.1e-06
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +  +H   +++l++s++ +wl+s++ Dg ++ W
  KHJ33420.1 135 IMQAHdVAIRALSYSHSDDWLLSADHDGLIKYW 167
                 557895559***************88******9 PP

  == domain 3  score: 27.7 bits;  conditional E-value: 5.8e-10
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++++++ GH + +++lafsp+ a ++++sdD t++i+d
  KHJ33420.1 172 NNVKVIQGHgDAIRDLAFSPNDAKFVTASDDSTLKIFD 209
                 789999***666************************98 PP

  == domain 4  score: 23.1 bits;  conditional E-value: 1.5e-08
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  +l GH  +  s++++p + +l+sGs+D+ v++Wd
  KHJ33420.1 217 SVLNGHgWDAKSVDWHPTKGLLVSGSKDHLVKLWD 251
                 57899*44489***********************9 PP

  == domain 5  score: 13.7 bits;  conditional E-value: 1.5e-05
                 TEEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 
                 g+cl+tl GH + +t   f p + + la++ +D+t ri+d
  KHJ33420.1 255 GRCLTTLHGHkNTITKTIFEPVKGLcLATSARDQTARIFD 294
                 68********8889877666666665778889******98 PP

  == domain 6  score: 10.4 bits;  conditional E-value: 0.00016
                 EESS.SSEEEEEEETTSSE.EEEEETTSEE CS
        WD40   7 ltGH.ssvtslafspdgaw.lasGsdDgtv 34 
                 l+GH + +t l ++p  +  l++G+ Dgt+
  KHJ33420.1 304 LKGHeKEITTLIWHPIVSSlLSTGGGDGTI 333
                 78999999999555544444567877***9 PP

  == domain 7  score: 20.8 bits;  conditional E-value: 8.3e-08
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 
                  +H ++v+sl ++p g+ lasGs D++ ++W
  KHJ33420.1 375 HAHeFPVWSLHWHPLGHILASGSNDRSTKFW 405
                 356666************************* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0   0.00089       5.3      35      65 ..      95     125 ..      87     129 .. 0.88
   2 ?    3.9   0.0     0.011        65      35      63 ..     137     165 ..     129     171 .. 0.86
   3 !   10.4   0.0    0.0001       0.6       2      70 ..     147     213 ..     146     222 .. 0.86
   4 !   10.6   0.0   8.9e-05      0.53      38      86 ..     223     270 ..     217     276 .. 0.87
   5 ?    1.5   0.0      0.06   3.6e+02      34      62 ..     304     333 ..     279     339 .. 0.66
   6 !   10.0   0.0   0.00014      0.85      34      62 ..     374     402 ..     363     410 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00089
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrll 65 
                  +k+++ v+ +aW p+g+ L  + s ge  l 
   KHJ33420.1  95 NKNKHPVNVVAWTPEGRRLLTGSSSGEFTLW 125
                  678999********************98875 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.011
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevr 63 
                  +++d  +r+L++++++  L  a +dg ++
   KHJ33420.1 137 QAHDVAIRALSYSHSDDWLLSADHDGLIK 165
                  56999*********************987 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 0.0001
  ANAPC4_WD40   2 swcptmDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesg 70 
                  s++ + D +  a +dg +     n+++v  +  ++++  +r+La++p++  ++ a +d++++++d   g
   KHJ33420.1 147 SYSHSDDWLLSADHDGLIKYWQPNFNNVKVI--QGHGDAIRDLAFSPNDAKFVTASDDSTLKIFDFAGG 213
                  6778888888888888888888888888888..899****************************97655 PP

  == domain 4  score: 10.6 bits;  conditional E-value: 8.9e-05
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtc 86 
                  +   +s+ W+p   lL+ + +d  v+l d  +g+++ +l+ +++ ++t+
   KHJ33420.1 223 GWDAKSVDWHPTKGLLVSGSKDHLVKLWDPRTGRCLTTLHGHKN-TITK 270
                  556789********************************998887.4665 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 0.06
  ANAPC4_WD40  34 edkedsevrsLaWkpd.gklLavaysdgev 62 
                   +++++e++ L W+p   +lL  +  dg++
   KHJ33420.1 304 LKGHEKEITTLIWHPIvSSLLSTGGGDGTI 333
                  467888999999998525666777777766 PP

  == domain 6  score: 10.0 bits;  conditional E-value: 0.00014
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgev 62 
                  +++++  v sL+W+p g++La + +d + 
   KHJ33420.1 374 NHAHEFPVWSLHWHPLGHILASGSNDRST 402
                  556778899**************999765 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0   3.7e-05      0.22      57     164 ..      96     202 ..      85     217 .. 0.81
   2 ?    1.7   0.0     0.035   2.1e+02      62     107 ..     226     269 ..     212     324 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.7e-05
                 ESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEEC...SCEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT.TTEEEEEEE-TT--EEEE CS
       eIF2A  57 kkegpihdvaWspkskefaviyGkmpakvslfdl...kvkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvk.kkkkiakaeaanatlvew 151
                 k++ p+  vaW p+++++  + G +  + +l++    + + i++ +  +  ++ +s ++  +l a    l   ++ w+ + +  k+ + +     ++ +
  KHJ33420.1  96 KNKHPVNVVAWTPEGRRL--LTGSSSGEFTLWNGtgfNFETIMQAHDVAIRALSYSHSDDWLLSADHDGL---IKYWQPNfNNVKVIQGHGDAIRDLAF 189
                 456789999999999996..58999999999999444589999999999999999999999999987766...99999988777788888888899999 PP

                 -TTSSEEEEEE-T CS
       eIF2A 152 spdgryvlTatta 164
                 sp++  ++Ta+  
  KHJ33420.1 190 SPNDAKFVTASDD 202
                 9999999999865 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.035
                 EEEEEE-TTSS-EEEEESSSSCEEEEEECSCEEEEEEEEES--EEE CS
       eIF2A  62 ihdvaWspkskefaviyGkmpakvslfdlkvkviskleeqkrNtif 107
                 ++ v W p++   +++ G  +  v+l+d +     ++ + ++Nti 
  KHJ33420.1 226 AKSVDWHPTK--GLLVSGSKDHLVKLWDPRTGRCLTTLHGHKNTIT 269
                 5677787764..47899************98888888899999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (647 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       479  (0.0267165); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 4681.37
//
Query:       KHJ33421.1  [L=609]
Description: putative fyve phd zinc finger [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-07   30.9   9.1    1.8e-07   30.9   9.1    2.7  2  PHD             PHD-finger
      3e-07   30.7   6.7      3e-07   30.7   6.7    3.7  3  zf-RING_2       Ring finger domain
    2.7e-06   27.5  20.0    2.8e-05   24.3  10.5    3.1  2  zf-rbx1         RING-H2 zinc finger domain
    8.7e-06   25.7   2.2    8.7e-06   25.7   2.2    2.6  2  zf-ANAPC11      Anaphase-promoting complex subunit 11 RING-H2
    1.5e-05   24.8   5.1    1.5e-05   24.8   5.1    3.1  3  Prok-RING_4     Prokaryotic RING finger family 4
     0.0001   22.0   2.5     0.0001   22.0   2.5    3.2  4  zf-C3HC4_2      Zinc finger, C3HC4 type (RING finger)
    0.00029   20.6   3.3    0.00029   20.6   3.3    3.8  2  zf-C3HC4_3      Zinc finger, C3HC4 type (RING finger)
     0.0058   16.6   5.6     0.0058   16.6   5.6    3.5  4  zf-RING_5       zinc-RING finger domain
  ------ inclusion threshold ------
      0.013   15.4   5.6      0.013   15.4   5.6    3.0  3  zf-C3HC4        Zinc finger, C3HC4 type (RING finger)
       0.31   11.0  12.2       0.28   11.1   5.8    3.0  3  Prok-RING_1     Prokaryotic RING finger family 1
       0.59    9.8  10.3      0.094   12.4   4.8    2.5  2  zf-P11          P-11 zinc finger
        1.8    8.8   9.9       0.34   11.1   0.8    2.6  2  FANCL_C         FANCL C-terminal domain
        1.8    8.6  11.8        2.7    8.1   4.6    2.7  2  DZR             Double zinc ribbon
          2    8.5  15.7        1.2    9.2   2.6    3.9  3  zf-RING_UBOX    RING-type zinc-finger


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   4.2      0.49   6.3e+02      20      50 ..      57      81 ..      44      83 .. 0.78
   2 !   30.9   9.1   1.4e-10   1.8e-07       2      50 ..     130     173 ..     129     174 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.49
                TTSCEEETTTSSSTHSHHSHHSSTBSSTTTH CS
         PHD 20 gCkrwfHqkClkppleseekpegewlCekCk 50
                 C++  H+ Cl+   +   +++   +C+ C+
  KHJ33421.1 57 PCNHFLHNHCLQEWSQ---ISN---TCPLCR 81
                5**********98755...443...677776 PP

  == domain 2  score: 30.9 bits;  conditional E-value: 1.4e-10
                 BTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTH CS
         PHD   2 CavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCk 50 
                 C +C++ s ++e l++Cd C+  +H++C+ ++    ++p g+w+C +C 
  KHJ33421.1 130 CPICNE-SRNPEVLILCDACDANYHTYCVCLD----DVPLGNWFCMECA 173
                 ******.9**********************99....568889******6 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.2      0.37   4.8e+02       2      11 ..       7      16 ..       6      22 .. 0.79
   2 !   30.7   6.7   2.4e-10     3e-07      16      44 .]      53      81 ..      42      81 .. 0.85
   3 ?    2.2   9.2      0.19   2.4e+02       3      30 ..     130     157 ..     128     175 .. 0.74

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.37
   zf-RING_2  2 eCpICleels 11
                eC IC+ +l+
  KHJ33421.1  7 ECIICTLNLD 16
                9****87775 PP

  == domain 2  score: 30.7 bits;  conditional E-value: 2.4e-10
   zf-RING_2 16 vlllpCgHvfhreClerwlrssstCPlCr 44
                ++++pC+H+ h +Cl++w + s+tCPlCr
  KHJ33421.1 53 AVIKPCNHFLHNHCLQEWSQISNTCPLCR 81
                44679***********************9 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.19
   zf-RING_2   3 CpICleelssadsvlll.pCgHvfhreCl 30 
                 CpIC +e  +++ ++l+  C   +h  C+
  KHJ33421.1 130 CPIC-NESRNPEVLILCdACDANYHTYCV 157
                 ****.67777777776647*988998886 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3  10.5   2.2e-08   2.8e-05      16      55 .]      43      81 ..       6      81 .. 0.86
   2 !    7.2   1.9    0.0049       6.2      11      41 ..     127     157 ..     122     159 .. 0.91

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 2.2e-08
     zf-rbx1 16 eckapgdeecpvvlGeCgHaFHlhCiskWlktrkvCPlcr 55
                 ck+++ +  + v+  C+H  H hC+++W + +++CPlcr
  KHJ33421.1 43 PCKNNDLR-AVAVIKPCNHFLHNHCLQEWSQISNTCPLCR 81
                46666666.778888************************8 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0049
     zf-rbx1  11 eeacieckapgdeecpvvlGeCgHaFHlhCi 41 
                  ++c+ c+++ + e+ + + +C  ++H+ C+
  KHJ33421.1 127 ADPCPICNESRNPEVLILCDACDANYHTYCV 157
                 589**********9****************7 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   2.2   6.8e-09   8.7e-06      37      83 ..      43      86 ..       5      88 .. 0.82
   2 ?    3.6   1.1     0.055        71      35      61 ..     130     157 ..     120     166 .. 0.80

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 6.8e-09
                TCSTTTTTS-EEEBTTS-EEEHHHHHHHHHHHSTSSB-TTTSSB--B CS
  zf-ANAPC11 37 sckfpGddcplvlGkckhnfhlhcilkwletetskglcpmcrqtfkl 83
                 ck        v+  c+h +h+hc+++w +     + cp+crq+f+l
  KHJ33421.1 43 PCKNNDLRAVAVIKPCNHFLHNHCLQEWSQ---ISNTCPLCRQSFNL 86
                566666667779999*************65...5578*******987 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.055
                 -TTCSTTTTTS-EEEBT.TS-EEEHHHH CS
  zf-ANAPC11  35 cpsckfpGddcplvlGk.ckhnfhlhci 61 
                 cp c+   +   l+l   c+ n+h++c+
  KHJ33421.1 130 CPICNESRNPEVLILCDaCDANYHTYCV 157
                 999988776555555444*********8 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       5.5   7.1e+03       1       7 [.       8      14 ..       8      35 .. 0.72
   2 !   24.8   5.1   1.1e-08   1.5e-05       8      40 ..      50      84 ..      42      88 .. 0.83
   3 ?    2.7   0.8     0.091   1.2e+02      31      39 ..     128     136 ..     120     143 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 5.5
  Prok-RING_4  1 CvlCgeq 7 
                 C++C+ +
   KHJ33421.1  8 CIICTLN 14
                 8888876 PP

  == domain 2  score: 24.8 bits;  conditional E-value: 1.1e-08
  Prok-RING_4  8 ekkailepCgHlvCkeCfdsk.dls.sCPlCqrri 40
                 + +a+++pC+H + ++C++++ + s +CPlC++ +
   KHJ33421.1 50 RAVAVIKPCNHFLHNHCLQEWsQISnTCPLCRQSF 84
                 57899****************76667******986 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.091
  Prok-RING_4  31 ssCPlCqrr 39 
                    CP+C++ 
   KHJ33421.1 128 DPCPICNES 136
                  47****975 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.4       4.2   5.3e+03       1       9 [.       7      15 ..       7      17 .. 0.74
   2 !   22.0   2.5   8.2e-08    0.0001      13      40 .]      53      80 ..      46      80 .. 0.91
   3 ?   -2.4   4.9       3.4   4.3e+03       2      18 ..     130     145 ..     129     161 .. 0.63
   4 ?   -3.4   0.3         7   8.9e+03      22      27 ..     168     173 ..     166     174 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 4.2
  zf-C3HC4_2  1 kCpiCldml 9 
                +C iC   l
  KHJ33421.1  7 ECIICTLNL 15
                699997655 PP

  == domain 2  score: 22.0 bits;  conditional E-value: 8.2e-08
  zf-C3HC4_2 13 svvtpCgHvfCqkCilrsLeekneCPlC 40
                 v++pC+H  ++ C++++ + +n CPlC
  KHJ33421.1 53 AVIKPCNHFLHNHCLQEWSQISNTCPLC 80
                4789*************999999***** PP

  == domain 3  score: -2.4 bits;  conditional E-value: 3.4
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpC 18 
                 CpiC ++ + p v++ C
  KHJ33421.1 130 CPICNESRN-PEVLILC 145
                 999998865.7777755 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 7
  zf-C3HC4_2  22 fCqkCi 27 
                 fC +C 
  KHJ33421.1 168 FCMECA 173
                 999996 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.1      0.61   7.8e+02       2      10 ..       5      13 ..       4      22 .. 0.74
   2 !   20.6   3.3   2.3e-07   0.00029       8      47 ..      44      84 ..      43      87 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.61
                GSB-TTTSS CS
  zf-C3HC4_3  2 deeCviCle 10
                d+eC+iC  
  KHJ33421.1  5 DQECIICTL 13
                567888864 PP

  == domain 2  score: 20.6 bits;  conditional E-value: 2.3e-07
                TSSS..BS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B- CS
  zf-C3HC4_3  8 Cler..prnvvllpCgHlvlCeeCaekllkrkkkCpiCrrpi 47
                C+++  ++ +v+ pC+H+ l ++C++++ + +++Cp+Cr++ 
  KHJ33421.1 44 CKNNdlRAVAVIKPCNHF-LHNHCLQEWSQISNTCPLCRQSF 84
                6665335557888*****.*********99*********986 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.2       5.1   6.5e+03      37      42 ..       6      11 ..       4      13 .. 0.79
   2 !   16.6   5.6   4.6e-06    0.0058      14      44 .]      52      82 ..      34      82 .. 0.86
   3 ?    1.3   0.1      0.26   3.3e+02      35      43 ..     126     134 ..     117     137 .. 0.80
   4 ?   -3.6   2.2       9.2   1.2e+04      23      33 ..     143     153 ..     142     159 .. 0.64

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 5.1
   zf-RING_5 37 avCpiC 42
                ++C iC
  KHJ33421.1  6 QECIIC 11
                789999 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 4.6e-06
   zf-RING_5 14 kfyltsCgHifCekClkkllekeavCpiCrk 44
                 +++ +C H+++++Cl++ ++ +++Cp+Cr+
  KHJ33421.1 52 VAVIKPCNHFLHNHCLQEWSQISNTCPLCRQ 82
                48999************************97 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.26
   zf-RING_5  35 keavCpiCr 43 
                 + + CpiC+
  KHJ33421.1 126 EADPCPICN 134
                 6688****7 PP

  == domain 4  score: -3.6 bits;  conditional E-value: 9.2
   zf-RING_5  23 ifCekClkkll 33 
                 i+C++C  ++ 
  KHJ33421.1 143 ILCDACDANYH 153
                 67888866555 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       3.7   4.7e+03       1       7 [.       8      14 ..       8      24 .. 0.81
   2 ?   15.4   5.6     1e-05     0.013      13      41 .]      54      80 ..      31      80 .. 0.84
   3 ?   -3.2   7.2       6.2   7.9e+03       1      22 [.     130     156 ..     130     172 .. 0.61

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.7
                -TTT-S- CS
    zf-C3HC4  1 CpiClee 7 
                C+iC+ +
  KHJ33421.1  8 CIICTLN 14
                9999755 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 1e-05
                .E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4 13 elleCkHsfCskCirkilksrkkvkCPlC 41
                 + +C+H ++++C++++ +   +++CPlC
  KHJ33421.1 54 VIKPCNHFLHNHCLQEWSQ--ISNTCPLC 80
                588****************..9999**** PP

  == domain 3  score: -3.2 bits;  conditional E-value: 6.2
                 -TTT-S--SS-E...E-TTS...--B- CS
    zf-C3HC4   1 CpiCleeakepn..elleCk...HsfC 22 
                 CpiC e    ++    + C+   H++C
  KHJ33421.1 130 CPICNESRNPEVliLCDACDanyHTYC 156
                 *****9999988444444543335555 PP

>> Prok-RING_1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       3.1   3.9e+03       4      13 ..       5      14 ..       3      16 .. 0.77
   2 ?    2.3   0.0      0.12   1.6e+02       4      15 ..      74      85 ..      71      91 .. 0.85
   3 ?   11.1   5.8   0.00022      0.28       4      34 ..     127     156 ..     124     159 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 3.1
  Prok-RING_1  4 gkkCpvCgke 13
                 +++C +C  +
   KHJ33421.1  5 DQECIICTLN 14
                 689****865 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.12
  Prok-RING_1  4 gkkCpvCgkelk 15
                  + Cp+C++ ++
   KHJ33421.1 74 SNTCPLCRQSFN 85
                 578******997 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 0.00022
  Prok-RING_1   4 gkkCpvCgkelkeedDiVvCpeCgtpyHraC 34 
                   + Cp+C++  ++e  ++ C++C + yH  C
   KHJ33421.1 127 ADPCPICNESRNPE-VLILCDACDANYHTYC 156
                  679******99998.7899**********99 PP

>> zf-P11  P-11 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   4.8   7.3e-05     0.094       5      43 ..      44      82 ..      41      85 .. 0.84
   2 ?   -1.7   0.2       1.9   2.4e+03      36      42 ..     128     134 ..     126     136 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.3e-05
                BTTTSS--SSEEE-SSSEEEHHHHHHHHHHSSBETTTSS CS
      zf-P11  5 CksCWfkdksLveCsdHYLClrClqllLsvserCpiCkk 43
                Ck    +  ++++  +H+L  +Clq   ++s+ Cp+C++
  KHJ33421.1 44 CKNNDLRAVAVIKPCNHFLHNHCLQEWSQISNTCPLCRQ 82
                555555566778888**********************86 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.9
                 SBETTTS CS
      zf-P11  36 erCpiCk 42 
                 + CpiC 
  KHJ33421.1 128 DPCPICN 134
                 78****6 PP

>> FANCL_C  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.8   0.00026      0.34      27      53 ..      57      86 ..      47      88 .. 0.78
   2 ?    1.1   2.6      0.35   4.5e+02       4      37 ..     129     157 ..     126     168 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00026
                T----B-SGGGHHHHHHHHS...SS-TTT- CS
     FANCL_C 27 kCnkkfHsaCLkeWlrslke...srqsfdv 53
                 Cn+  H++CL+eW +  ++    rqsf++
  KHJ33421.1 57 PCNHFLHNHCLQEWSQISNTcplCRQSFNL 86
                5*************8754442226888876 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.35
                 S-SSS--SS-TT-----B--S-TT----B-SGGG CS
     FANCL_C   4 eCgiCyayrldsgevpdisCdnekCnkkfHsaCL 37 
                  C+iC   r        i Cd   C  ++H+ C+
  KHJ33421.1 129 PCPICNESRN---PEVLILCDA--CDANYHTYCV 157
                 6999988777...444678885..7777777664 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   4.6    0.0021       2.7       3      48 ..      65     148 ..      64     149 .. 0.88
   2 ?    6.2   6.2     0.008        10       1      48 [.     130     172 ..     130     173 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0021
         DZR   3 qCgeelppdarfCseCgtklkavaa.....................................edrCpsCgek.vdpearfCpeC 48 
                 +C +e ++ +++C+ C+++ + v+                                      +d Cp C+e+ +++    C++C
  KHJ33421.1  65 HCLQEWSQISNTCPLCRQSFNLVEVldtvngaiissytvkdkkqeatldlptwtqddneedeADPCPICNESrNPEVLILCDAC 148
                 899****************775555778999*****************************************555555569999 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.008
         DZR   1 CpqCgee.lppdarfCseCgtklkavaaedrCpsCgekvdpearfCpeC 48 
                 Cp C+e  +p+  + C++C ++       + C+ C  +v+++  fC eC
  KHJ33421.1 130 CPICNESrNPEVLILCDACDANYH-----TYCV-CLDDVPLGNWFCMEC 172
                 9***9984666677*********6.....9997.************999 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   2.6   0.00093       1.2      14      39 .]      55      78 ..      43      78 .. 0.81
   2 ?    1.3   0.2      0.29   3.7e+02       1       9 [.      77      85 ..      77      91 .. 0.88
   3 ?    3.4   3.6     0.062        80       1      21 [.     130     156 ..     130     188 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00093
  zf-RING_UBOX 14 l.pCGHtFCreClwelskslegafkCP 39
                    pC H ++ +Cl   +++++ + +CP
    KHJ33421.1 55 IkPCNHFLHNHCL---QEWSQISNTCP 78
                  339**********...89999999999 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.29
  zf-RING_UBOX  1 CpIClelft 9 
                  Cp C+++f+
    KHJ33421.1 77 CPLCRQSFN 85
                  *******97 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.062
  zf-RING_UBOX   1 CpIClelftdP..lvlpCG......HtFC 21 
                   CpIC+e+  +P  l+l C       Ht+C
    KHJ33421.1 130 CPICNESR-NPevLIL-CDacdanyHTYC 156
                   *****977.6765335.433336667777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (609 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       827  (0.0461264); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.60u 0.23s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 4360.99
//
Query:       KHJ33422.1  [L=375]
Description: putative 50s ribosomal subunit l30 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-34  117.6   0.0    8.4e-34  116.9   0.0    1.4  1  MRP-L46   39S mitochondrial ribosomal protein L46
  ------ inclusion threshold ------
       0.15   12.1   0.0       0.31   11.1   0.0    1.6  1  NUDIX     NUDIX domain


Domain annotation for each model (and alignments):
>> MRP-L46  39S mitochondrial ribosomal protein L46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.9   0.0   9.4e-38   8.4e-34       2     119 .]      88     226 ..      87     226 .. 0.96

  Alignments for each domain:
  == domain 1  score: 116.9 bits;  conditional E-value: 9.4e-38
                 EEEEE-B--B--SB-----HHHHHH....HHHHHHHHHHT----HHHHTTHHHHHHHHHHH---------.....----HHHHHHHHHHHHHHS..... CS
     MRP-L46   2 aikagliLsRpPvvtrelspfEkefYkYqkellerlelefskyfyfkkgtlaelkfkelkkklterdeevardigkpdlrqererndeqeikspks... 97 
                 +i++g+iLsRpP++t++++pfE++f++Yqk+l+erl+++fs+yfyfkk+t+a++++   k k++er + +a++ g+++++ + ++nde  ik++     
  KHJ33422.1  88 EIHSGVILSRPPLLTPKPHPFENAFFFYQKRLNERLAIPFSRYFYFKKDTPANTDW---KIKIKERGGVPAKELGTYNAYGKYAWNDELLIKEKHMvep 183
                 69******************************************************...*********************************9988888 PP

                 .................................----S-SSTT CS
     MRP-L46  98 ..yeealeeda...................rvikpasRvTeaD 119
                     ++l +da                    v+ p sR+TeaD
  KHJ33422.1 184 efITNQLVKDArvcvtedgvvvqdeaarleGVEMPRSRITEAD 226
                 88777777777999999**********9999***********9 PP

>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   3.5e-05      0.31      17      59 ..     242     283 ..     236     363 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.5e-05
                 EEEEEESSSSTTTEESSEEECBTTSHHHHHHHHHHHHHHSEEE CS
       NUDIX  17 vLlvrrskkpfpgWelPgGkvepgEtpeeAArREleEEtGlea 59 
                 + lv rs k+++ W +P G+v   E++  AA R ++E  Gl+ 
  KHJ33422.1 242 LYLVVRS-KDTKLWGFPSGEVLGKENLHKAAERIIAESCGLNM 283
                 6777788.677779********999***********9999844 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2819.20
//
Query:       KHJ33423.1  [L=187]
Description: putative peptidylprolyl isomerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-32  109.7   0.0    1.1e-31  109.0   0.0    1.4  1  FKBP_C    FKBP-type peptidyl-prolyl cis-trans isomerase


Domain annotation for each model (and alignments):
>> FKBP_C  FKBP-type peptidyl-prolyl cis-trans isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.0   0.0     6e-36   1.1e-31       2      94 .]      36     127 ..      35     127 .. 0.96

  Alignments for each domain:
  == domain 1  score: 109.0 bits;  conditional E-value: 6e-36
                 SCBB-TTCEEEEEEEEEET.TSSEEEEHCCHTSEEEEETTSSSSCHHHHHHHTTSBTT-EEEEEEEGGGTTTTTTBCTTTB.TTSEEEEEEEEE CS
      FKBP_C   2 keeakegdtVtvhykgkle.dgkvfdssrsrakplefkvGsgqvikGfeealegmkvGekrtltippelaYgekglaggvippnatLvFeveLl 94 
                 +++ k+gdt+ vhy g+l+  gk fdss++r+kpl+f+vG+g vikG++e l  m+ G+krtltippe +Yg+  + +  ip+ +tL+Fe eL+
  KHJ33423.1  36 ERKSKKGDTIFVHYRGTLQsSGKQFDSSYDRGKPLSFTVGKGMVIKGWDENLIDMCIGDKRTLTIPPEFGYGSSSMGP--IPASSTLIFETELV 127
                 5679***************99*******************************************************55..***********995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1405.32
//
Query:       KHJ33424.1  [L=321]
Description: hypothetical protein EV44_g5213 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       732  (0.0408277); expected 358.6 (0.02)
Passed bias filter:                      563  (0.0314016); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2472.58
//
Query:       KHJ33425.1  [L=815]
Description: putative sulfate transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.5e-76  255.0  11.8    9.5e-76  255.0  11.8    1.5  1  Sulfate_transp  Sulfate permease family
    9.2e-18   64.0   0.0    2.2e-17   62.8   0.0    1.6  1  STAS            STAS domain
    0.00052   20.3   0.0     0.0014   18.9   0.0    1.7  1  STAS_2          STAS domain
     0.0052   17.2   2.7     0.0052   17.2   2.7    3.0  3  MFS_MOT1        Molybdate transporter of MFS superfamily


Domain annotation for each model (and alignments):
>> Sulfate_transp  Sulfate permease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.0  11.8   2.1e-79   9.5e-76       2     364 ..     210     597 ..     209     615 .. 0.92

  Alignments for each domain:
  == domain 1  score: 255.0 bits;  conditional E-value: 2.1e-79
  Sulfate_transp   2 kgDliaGitvallaiPqalayal.laglppiygLyssvvpqlvyalfGtsrqlavGpvavlslivgeiiakv......aeeepekgieiattltl 89 
                     kgDli+++t+a++ +P+al+ya  la++ pi gLys v+ +l+ya+fG+s+q+++Gp+a  sl+vg++++ +      ++++ +++  +a +++ 
      KHJ33425.1 210 KGDLISALTMASFYLPMALSYAAnLAHISPINGLYSFVFNPLIYAIFGSSPQMILGPEAPGSLLVGSMVRTLvdqgeiLDDDIQSHGIVAGIIIS 304
                     79**********************************************************************88888877778888889999999 PP

  Sulfate_transp  90 laGviqvllGllRLgflveflseavlsGfiaGaaivillsqikvllgle......rvskkeslvsvlsslftnlekvnlakvvlgllllvvLlvt 178
                     l+G + +++Gl RLgfl +++s++ l+Gfi ++++vi++ q+   lgl          +++++   l+ +f+nl+k++  ++ ++++ +v +++ 
      KHJ33425.1 305 LTGSFILVAGLCRLGFLESVVSRPFLRGFICAIGVVIAVDQLIPELGLAdladlmGDVSHGNTTGKLRFIFQNLNKISAITCSVSGVSFVTIMFF 399
                     9***********************************************98776554568999********************************* PP

  Sulfate_transp 179 kellkklkkl..lvipapaelvavivatlvsaifelkreagvkivgeipsg.lpelslp....kvdwsllsallpdalaialvglleaiavsksl 266
                     +  +k+l+ +  + + +p  +++v+++ l+++ f + +  g  i+g+++s+  p +s++      ++ l+++ + +a++ial+g++e+  +++sl
      KHJ33425.1 400 RIAKKRLQRRypMIVYIPDRFLIVVISALLTWHF-RWDMMGLEILGNVKSNsEPIFSVHwpfkTSNMRLIRESMGTAFSIALLGFFESSVAARSL 493
                     *99999988899999*******************.8999***********94555788887877788899*****************99999999 PP

  Sulfate_transp 267 dk......kkgykvdsnkELvAlGfsNilsslfgglpatgafsrsavnikaGaktqlsglvsalvvllvllvltplleyiPkavLaaiiivagkg 355
                      +       +g ++++n+ELvAlG++N++++ f +lpa+g++ rs vn ++G+kt++s+++++++ ++ +l+l pl++y+PkavL ++i+v+ ++
      KHJ33425.1 494 SNeekncvLQGITLSPNRELVALGLANLVGGSFCALPAFGGYGRSKVNTSTGGKTPMSSVFLSMIAAISVLYLLPLFHYLPKAVLCSMITVVSWS 588
                     88321122346799********************************************************************************* PP

  Sulfate_transp 356 lLvelkelk 364
                     l++e ++ +
      KHJ33425.1 589 LIEETPHDV 597
                     999877664 PP

>> STAS  STAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.8   0.0   4.9e-21   2.2e-17       4     103 ..     670     779 ..     669     794 .. 0.90

  Alignments for each domain:
  == domain 1  score: 62.8 bits;  conditional E-value: 4.9e-21
                 EEECTTEEEEEEEEEESHHHHHHHHHHHHHHHHCCC...............-SEEEEEEEEEEEE-HHHHHHHHHHHHHHHHTT-EEEEES--HHHHHH CS
        STAS   4 aeeiegililrldgpidfanaesfkeklkravgeeperve.......kkeslkslildlsavsfiDssGvraLkeilkelkrigvevvlvnikpevrek 95 
                 +e+ieg+li+++++p++fan +++k++l+r + +++ +v+       ++e  +++i+d+ +v+ iD sG ++L+ei+k ++ +gv+++++ + pe    
  KHJ33425.1 670 LEFIEGCLIVKISEPLTFANTGQLKSRLRRLEIYGSTDVHpalprvrSPEHNRNIIFDIHGVTEIDGSGTQVLEEIVKAYREQGVRIFFCRCPPEGSAV 768
                 6899*******************************************89999*****************************************986655 PP

                 ...HHHTTCGG CS
        STAS  96 ...lektgffd 103
                    ++++g+ d
  KHJ33425.1 769 fkkFRRSGIID 779
                 22377777666 PP

>> STAS_2  STAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   3.1e-07    0.0014       3      75 ..     681     770 ..     679     774 .. 0.75

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 3.1e-07
      STAS_2   3 LsGeldldtaaelreqlleal.................aag.aevvvDlsgvervDsaalalLlalartarargrrlvlrglppalrrlld 75 
                 +s+ l+ ++  +l+++l+++                    + + +  D +gv+++D ++ ++L + +++ r++g r+ + + pp+  +++ 
  KHJ33425.1 681 ISEPLTFANTGQLKSRLRRLEiygstdvhpalprvrspE-HnRNIIFDIHGVTEIDGSGTQVLEEIVKAYREQGVRIFFCRCPPEGSAVFK 770
                 555666666666666666655556666666666666533.2479999**********************************9998777775 PP

>> MFS_MOT1  Molybdate transporter of MFS superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.3     0.022        98      73     109 ..     304     339 ..     283     341 .. 0.80
   2 !   17.2   2.7   1.2e-06    0.0052      19     111 .]     488     589 ..     474     589 .. 0.76
   3 ?   -3.5   0.3         3   1.4e+04      74      79 ..     621     626 ..     609     648 .. 0.47

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.022
    MFS_MOT1  73 illGlvllllgltgllerllrliPksvlgglllgaGl 109
                  l+G+++l+ gl++ l  l +++ +++l+g +++ G+
  KHJ33425.1 304 SLTGSFILVAGLCR-LGFLESVVSRPFLRGFICAIGV 339
                 35788888888887.8899999********9999997 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 1.2e-06
    MFS_MOT1  19 ialaala...........slsltalllsvGlmnlltglfggvPmchgAgglaaqyrfgartgaagillGlvllllgltgllerllrliPksvlgglllg 106
                 +a  +l+           +ls+++ l+ +Gl+nl++g f ++P   g g    +   g +t ++ ++l+++  +  l   l  l +++Pk+vl  ++ +
  KHJ33425.1 488 VAARSLSneekncvlqgiTLSPNRELVALGLANLVGGSFCALPAFGGYGRSKVNTSTGGKTPMSSVFLSMIAAISVL--YLLPLFHYLPKAVLCSMITV 584
                 444444457777788888999********************997655555555544588888888888776655444..5799**************99 PP

    MFS_MOT1 107 aGleL 111
                 + ++L
  KHJ33425.1 585 VSWSL 589
                 99887 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 3
    MFS_MOT1  74 llGlvl 79 
                 +++l++
  KHJ33425.1 621 FYSLTM 626
                 222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (815 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       690  (0.0384851); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.39
# Mc/sec: 6217.10
//
Query:       KHJ33426.1  [L=182]
Description: putative pyruvate dehydrogenase dihydrolipoamide acetyltransferase component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-14   51.0   0.6    1.3e-13   50.5   0.6    1.2  1  DUF5353   Family of unknown function (DUF5353)
  ------ inclusion threshold ------
      0.036   14.2   0.4      0.044   13.9   0.4    1.1  1  LicD      LicD family


Domain annotation for each model (and alignments):
>> DUF5353  Family of unknown function (DUF5353)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   0.6   1.4e-17   1.3e-13       2      60 ..     116     174 ..     115     179 .. 0.90

  Alignments for each domain:
  == domain 1  score: 50.5 bits;  conditional E-value: 1.4e-17
     DUF5353   2 kdnpvvvgNavlvavlsagLGfgAYrkyarGeLtwkvvglwagavGafavgdyyvskyl 60 
                  ++ + v N v+v +l +gL+fg Yr y +G+L+wkv+g+w+g+ Gafa++++ +  ++
  KHJ33426.1 116 DKDHIPVFNIVAVIALCSGLSFGLYRTYIAGQLNWKVLGIWTGIAGAFAIANFNLTLFF 174
                 55667788*******************************************99887776 PP

>> LicD  LicD family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.4   4.9e-06     0.044      91     158 ..      41     107 ..      13     127 .. 0.55

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.9e-06
        LicD  91 dsglyiDIfpldyvpkskllikkkkekeklkkklalkkslskkdkkelkkkillkkksfklkklnkkk 158
                  s + +DI+p+  vp + + +++++ k ++++++++ +s   + k ++ k+ + +++++k++  ++ k
  KHJ33426.1  41 VSSVDVDITPVHTVPTEFK-FQSVDAKTQENYLHEEHQSDEIQAKVTEEKHEKAAQSCEKKSIAKRGK 107
                 6899***********8654.444444444333333322222222222222222233333332222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1560  (0.0870099); expected 358.6 (0.02)
Passed bias filter:                      651  (0.0363099); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.35
# Mc/sec: 1579.01
//
Query:       KHJ33427.1  [L=1090]
Description: putative garp complex component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-51  172.6   0.3    1.4e-50  171.2   0.3    1.8  1  Vps54     Vps54-like protein
    6.1e-08   32.3   1.8    6.1e-08   32.3   1.8    1.8  2  Vps54_N   Vacuolar-sorting protein 54, of GARP complex
    0.00068   19.5   2.9     0.0019   18.0   0.9    2.5  2  DUF2451   Protein of unknown function C-terminus (DUF2451)
  ------ inclusion threshold ------
       0.24   11.4   3.2       0.49   10.4   0.6    2.9  3  LURAP     Leucine rich adaptor protein


Domain annotation for each model (and alignments):
>> Vps54  Vps54-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.2   0.3   3.2e-54   1.4e-50       2     134 .]     811     945 ..     810     945 .. 0.98

  Alignments for each domain:
  == domain 1  score: 171.2 bits;  conditional E-value: 3.2e-54
       Vps54   2 ekfvvvesallllkmieeYlelakelpslaseilsrllelLklfNsrtcqliLgAgAtrsagLktItakhLalasqslslvialipyvkealerhl..e 98 
                 e+f++++sa+l+l +++++l+l + +ps+++ei+s++l++L+lfNsr++qliLgAgAtrsagLk+It+khLalasq+ls+++ lip+++e+++rh+  +
  KHJ33427.1 811 ESFLLPNSAILCLYGLASFLHLNTGIPSMTPEIASSILSYLTLFNSRCTQLILGAGATRSAGLKNITTKHLALASQALSFISILIPHIQEFVRRHSsfS 909
                 89**********************************************************************************************999 PP

       Vps54  99 eksqesllaefdkvkrdyqehqneihaKLvsImedr 134
                 ++s+++ll+efdk+kr+y eh+++i +KLv+Im  r
  KHJ33427.1 910 SSSNATLLSEFDKIKREYLEHRKSISDKLVDIMAGR 945
                 99*******************************876 PP

>> Vps54_N  Vacuolar-sorting protein 54, of GARP complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   1.8   1.4e-11   6.1e-08      38     155 ..     266     383 ..     254     393 .. 0.94
   2 ?   -3.1   0.0      0.82   3.7e+03      89     117 ..     968     995 ..     919    1007 .. 0.68

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 1.4e-11
     Vps54_N  38 kklksqhdvvskklsqlilekreefvkelseveeiekelkesvvickngrraLdlakkeltrtsLellakskkrqllkkllktltaikelrelekrlee 136
                 +kl+ ++d ++ +l + i   +++f + l+ ++e+++e   s++  k+ r+ L +  ++++ t L+++  +++r+ lk+l kt  +++++ e  k+ + 
  KHJ33427.1 266 EKLSWYMDTIEIHLVNSISSASKSFFAALGSLRELHQETSISINRLKTLRKDLLSLDEDMALTGLKIVNMKQRRENLKQLSKTIIQLQTIMEGIKNCKY 364
                 678999********************************************************************************************* PP

     Vps54_N 137 lleeedysaAiqllletkq 155
                 l+ee+d  +A++ +   ++
  KHJ33427.1 365 LIEEGDVENALDSIDSLEN 383
                 ********99987766555 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.82
     Vps54_N  89 aLdlakkeltrtsLellakskkrqllkkl 117
                 ++++ +ke t+t  ++l+k+  +q+ +++
  KHJ33427.1 968 YMETLTKE-TNTLYRVLSKHLPKQAVNQI 995
                 33334444.55666666666666666655 PP

>> DUF2451  Protein of unknown function C-terminus (DUF2451)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       0.2   8.9e+02      58      85 ..     341     368 ..     330     374 .. 0.82
   2 !   18.0   0.9   4.3e-07    0.0019      12     172 ..     886    1042 ..     878    1048 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.2
     DUF2451  58 iykavasrllnleslleaianvkWdvke 85 
                  +k++++ +++l+ ++e i+n+k+ ++e
  KHJ33427.1 341 NLKQLSKTIIQLQTIMEGIKNCKYLIEE 368
                 568899999***************9987 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 4.3e-07
     DUF2451   12 ESliflaeqleslkpvlesll...pekkrglleeFyeqtvsavadlrepiykavasrllnle.slleaianvkWdvkevatehssYvdqllkevesf 104 
                  ++l+f++ ++  +++++++      +++++ll+eF  ++     + r+ i +++   +   +   ++++ +++W  +  ++  ++Y ++l+ke +++
  KHJ33427.1  886 QALSFISILIPHIQEFVRRHSsfsSSSNATLLSEFD-KIKREYLEHRKSISDKLVDIMAGRTiAHTKSMRSIDWSKE--RDGVNHYMETLTKETNTL 979 
                  555555555555555555443222555888888885.6666666777777755555555444588999******876..577889************ PP

     DUF2451  105 skklqelkerlklpeevkkalweaavevvtetLvegyskvkkcseeGRalMqlDvqqllakleklski 172 
                   + l++     +lp+++ + +++ ++e   e+  +++++v+ +se  +  M+ Dv+ +  k+  l k+
  KHJ33427.1  980 YRVLSK-----HLPKQAVNQIMQPVFENYKEQWSKAFGEVSLVSEMAKERMLRDVEWFKDKMAYLDKS 1042
                  *****9.....79********************************************99999887765 PP

>> LURAP  Leucine rich adaptor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.89     4e+03      39      68 ..     122     151 ..     117     155 .. 0.75
   2 ?   10.4   0.6   0.00011      0.49      19      83 ..     330     391 ..     312     414 .. 0.76
   3 ?   -2.2   0.0      0.87   3.9e+03      63     104 ..     902     944 ..     879     949 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.89
       LURAP  39 lqqllainegieavkWlleekgtltsrcss 68 
                 l q+ a++ +++++k   ee gtl+s+  s
  KHJ33427.1 122 LSQVGALHGALQSMKESEEEYGTLSSKKPS 151
                 567777788888888888888888887665 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00011
       LURAP  19 eklrklklelanlraidvkllqqllainegieavkWlleekgtltsrcssltsslysldesedts 83 
                  k+ ++k+   nl+ +  k + ql +i egi   k+l+ee g +    +s+  sl  l + +d+s
  KHJ33427.1 330 LKIVNMKQRRENLKQLS-KTIIQLQTIMEGIKNCKYLIEE-GDVENALDSID-SLENLASGKDSS 391
                 58999999999999987.55669***************98.67777777764.455665555555 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.87
       LURAP  63 tsrcsslts.slysldesedtslrGsynslqdgsdkldgisvG 104
                   r ss++s s  +l ++ d+ +r  ++  +  sdkl +i  G
  KHJ33427.1 902 VRRHSSFSSsSNATLLSEFDKIKREYLEHRKSISDKLVDIMAG 944
                 5566777651556678888898998888888888888777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1090 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       708  (0.0394891); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.74u 0.26s 00:00:01.00 Elapsed: 00:00:00.44
# Mc/sec: 7492.62
//
Query:       KHJ33428.1  [L=718]
Description: putative dna replication licensing factor mcm5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   6.4e-106  352.5   0.5   1.7e-105  351.1   0.1    1.8  2  MCM              MCM P-loop domain
    3.9e-35  120.4   0.3    7.5e-35  119.5   0.3    1.4  1  MCM_OB           MCM OB domain
    7.2e-28   96.8   2.8    9.4e-28   96.5   1.5    2.0  2  MCM_lid          MCM AAA-lid domain
    2.6e-16   60.1   0.0    5.5e-16   59.0   0.0    1.6  1  MCM_N            MCM N-terminal domain
    1.4e-06   27.9   0.0    0.00038   19.9   0.0    2.4  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    2.6e-05   24.2   0.0    5.3e-05   23.2   0.0    1.5  1  AAA_5            AAA domain (dynein-related subfamily)
    0.00032   20.6   0.1     0.0019   18.1   0.0    2.4  2  AAA_3            ATPase family associated with various cellul
  ------ inclusion threshold ------
      0.037   13.7   0.1       0.45   10.2   0.1    2.2  1  Sigma54_activat  Sigma-54 interaction domain
       0.09   13.2   0.1       0.33   11.4   0.0    2.0  2  AAA              ATPase family associated with various cellul
       0.14   11.9   0.2       0.28   10.9   0.2    1.4  1  AAA_30           AAA domain


Domain annotation for each model (and alignments):
>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  351.1   0.1  9.6e-109  1.7e-105       2     224 .]     305     527 ..     304     527 .. 0.99
   2 ?   -1.3   0.1      0.52   9.4e+02       5      47 ..     597     639 ..     595     657 .. 0.77

  Alignments for each domain:
  == domain 1  score: 351.1 bits;  conditional E-value: 9.6e-109
                 HHHHHHHHTSSTHHHHHHHHSSTTSSS-HHHHHHHHHHHH---EBBBSSSSBBCSS-EEEEEESSTSTHHHHHHHHHHHSSSEEEEESSSSSSSHSSSE CS
         MCM   2 veeikelakekdiieklvksiapsiyghedvkkaillqlfggvkkkledktklrgdinvllvgdpgtaKsqlLkyveklapravytsgkgssaagLtaa 100
                 ++e+ e+++++di+++l+++iapsiyg++d+kkai+++lfgg+kk l+d++klrgdinvll+gdpgtaKsqlLk+vek+ap a+ytsgkgssaagLta+
  KHJ33428.1 305 EQEFLEISRRPDIYSILANCIAPSIYGNQDIKKAIACLLFGGSKKILPDGMKLRGDINVLLLGDPGTAKSQLLKFVEKVAPIAIYTSGKGSSAAGLTAS 403
                 68999********************************************************************************************** PP

                 EEEESSSSSEEEEETHHHHTTTSEEEEESGGGSTCHHHHHHHHHHHHSEEEEESSSCEEEEE--EEEEEEE--SSSSCCTTS-HHHHSSSSHHHHHHSS CS
         MCM 101 vvrdeetgefvleaGalvladkGvcciDefdkmkeedrsalhEamEqqtisiaKaGivatLnartsvlaAanpkagrydkkksvaeninlsaalLsrFD 199
                 v+rd +t+ef+le+Ga+vlad+G++ciDefdkm++edr+a+hEamEqqtisiaKaGi+++LnartsvlaAanp++gryd+ k+  eni++++++LsrFD
  KHJ33428.1 404 VQRDASTREFYLEGGAMVLADGGIVCIDEFDKMRDEDRVAIHEAMEQQTISIAKAGITTILNARTSVLAAANPIFGRYDDLKTPGENIDFQTTILSRFD 502
                 *************************************************************************************************** PP

                 EEEEE-SSTTHHHHHHHHHHHHHHH CS
         MCM 200 lifvllDkvdeekDeelaehivslh 224
                 +if+++D++d+ +De++a+h++ +h
  KHJ33428.1 503 MIFIVKDEHDRGRDEKMAKHVMGIH 527
                 *********************9876 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.52
                 HHHHHTSSTHHHHHHHHSSTTSSS-HHHHHHHHHHHH---EBB CS
         MCM   5 ikelakekdiieklvksiapsiyghedvkkaillqlfggvkkk 47 
                 i++l++  +i+e+l+k     i  +++v +ai l l ++++  
  KHJ33428.1 597 IRQLEAIIRITESLAKLSLSPIASESHVDEAIRLFLASTMDAV 639
                 6777777889999999999*************99998877654 PP

>> MCM_OB  MCM OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.5   0.3   4.2e-38   7.5e-35       2     125 ..     125     260 ..     124     261 .. 0.94

  Alignments for each domain:
  == domain 1  score: 119.5 bits;  conditional E-value: 4.2e-38
                 XGG--GGGTTSEEEEEEEEEEE---EEEEEEEEEEETTT-.-EEES---.......-SB-........TTT-HHH-EEE-GGGSEEEEEEEEEEE---- CS
      MCM_OB   2 lRdlrsehigklvkveGivtrasevkpklkkavfeckkcgktvevelee.......PrkCe......ekeCeskdpfkletekskfvdfqklklQEspe 87 
                 +R+l++ +i++lv v+Giv+ as  ++k++ ++++ck+c++t+ + ++        Pr C+      e++C+  dpf++++e+s+fvd+q +klQE+p+
  KHJ33428.1 125 IRNLDALTISRLVIVPGIVIGASVPSSKATALHIQCKNCRQTKILPVTGgfagislPRVCDrpkmpgEDSCP-MDPFVVVHESSQFVDQQIIKLQEAPD 222
                 8***************************************9888766656777777****999999999***.8************************* PP

                 ---------EEEEEEEGGGTT---TT-EEEEEEEEEEE CS
      MCM_OB  88 evpaGelPrslevileddlvdkvkPGdrvevtGiyral 125
                 +vp+GelPr++ + ++++l+++v PG+r++++Gi++++
  KHJ33428.1 223 QVPVGELPRHVLISTDRYLTNRVVPGTRCKIMGIFSIY 260
                 ***********************************987 PP

>> MCM_lid  MCM AAA-lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       7.3   1.3e+04      30      55 ..     101     131 ..      91     132 .. 0.68
   2 !   96.5   1.5   5.3e-31   9.4e-28       2      86 ..     545     634 ..     544     635 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 7.3
                 HHHHHHHH..TSS...TSSSST--HHHHHHH CS
     MCM_lid  30 YvelRkee..eds...krksipitvRqLesl 55 
                 Y ++R+    e++   ++++  i+ R+L++l
  KHJ33428.1 101 YSSVRDVVipEHQlllHSSAGEISIRNLDAL 131
                 6666665555222345567888999999886 PP

  == domain 2  score: 96.5 bits;  conditional E-value: 5.3e-31
                 HHHHHHHHHHHTT--BETCHHHHHHHHHHHHHHHHH.....TSSTSSSST--HHHHHHHHHHHHHHHHHHTSSSE-HHHHHHHHHHHHHH CS
     MCM_lid   2 llrkYiayarekikPklseeakeklseaYvelRkee.....edskrksipitvRqLesliRLseAlAklrlsevvteedveeairllkes 86 
                 ++++Yi+y+++++ P+ls+ea+ekls+++v++Rk+      e ++r+sipit RqLe++iR++e+lAkl+ls +++e++v+eairl+ +s
  KHJ33428.1 545 KMKRYISYCKSRCAPRLSPEAAEKLSSHFVSIRKQVhraelEANTRSSIPITIRQLEAIIRITESLAKLSLSPIASESHVDEAIRLFLAS 634
                 79********************************998887755689****************************************9887 PP

>> MCM_N  MCM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.0   0.0   3.1e-19   5.5e-16       1      86 [.      26     106 ..      26     155 .. 0.91

  Alignments for each domain:
  == domain 1  score: 59.0 bits;  conditional E-value: 3.1e-19
       MCM_N   1 qekFedFLeefkddsededgekkYrdqlqemaerekttLevdlddLaafdeeLaeailenpkeylplleealkevvkklepsykdd 86 
                 q++ e+F+ +f     + d+ ++Yrdq++e++  +++   vd+ +L +f+eeLa++++++p e++pl+e+alk++ +++  s+ +d
  KHJ33428.1  26 QNQLEQFILQF-----RLDNVFIYRDQIRENILVKQYYCDVDVGHLISFNEELAHRLTTEPAEIIPLFEAALKRCTQRIVYSSVRD 106
                 6789*******.....8899********************************************************9998877666 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0     0.005       8.9      21      47 ..     359     385 ..     354     414 .. 0.86
   2 !   19.9   0.0   2.1e-07   0.00038      98     159 ..     416     477 ..     407     501 .. 0.92

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.005
  Mg_chelatase  21 GgHnlllvGppGsGKtmlakrlpsllp 47 
                   G  n+ll+G pG+ K+ l k ++++ p
    KHJ33428.1 359 GDINVLLLGDPGTAKSQLLKFVEKVAP 385
                   7889**************999988877 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 2.1e-07
  Mg_chelatase  98 kpGeislahnGvLfLDElpefkrkvlevLRePledgevtisrakakvefparfqlvaamNpc 159
                   + G++ la  G++ +DE+ +++ +   ++ e +e+++++i++a  ++   ar+ ++aa+Np 
    KHJ33428.1 416 EGGAMVLADGGIVCIDEFDKMRDEDRVAIHEAMEQQTISIAKAGITTILNARTSVLAAANPI 477
                   57999*******************************************************96 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   2.9e-08   5.3e-05       1     123 [.     362     477 ..     362     487 .. 0.83

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 2.9e-08
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--..........--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..- CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreik.ngttslvdsplvraaregeilvlDEveraesevlnsLlslleerrlllee 98 
                 +vlL+G+pGt+Ks+l + + ++  +++ ++   ++ +++ l+ +++ + + ++ + ++ ++     g i+++DE++++++e   + +  +e++++++++
  KHJ33428.1 362 NVLLLGDPGTAKSQLLKFVEKV--APIAIYTSGKGSSAAGLTASVQRDaSTREFYLEGGAM-VLADGGIVCIDEFDKMRDEDRVAIHEAMEQQTISIAK 457
                 69*************9999998..799999*************999875333334444444.588*******************************988 PP

                 SSSEEE---......-EEEEEESS- CS
       AAA_5  99 ggelvkaknddllerfrviatanpl 123
                  g  +  ++      ++v+a+anp 
  KHJ33428.1 458 AGITTILNAR-----TSVLAAANPI 477
                 7766555553.....7888888875 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       2.6   4.6e+03      15      39 ..     202     226 ..     199     242 .. 0.81
   2 !   18.1   0.0   1.1e-06    0.0019       2     113 ..     363     477 ..     362     483 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2.6
       AAA_3  15 lvkalakaldlefkriqftpdllPs 39 
                 +v++ ++ +d ++ ++q +pd +P 
  KHJ33428.1 202 VVHESSQFVDQQIIKLQEAPDQVPV 226
                 5777889999999999999999996 PP

  == domain 2  score: 18.1 bits;  conditional E-value: 1.1e-06
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkkGpvf.an..llladeinrappktqsalleameerqvtve..g 95 
                 vll g PG+ak +l k + k+  + +           + ++ +   +++++ef ++ G+++ a+  ++  de ++     + a+ eame+++++++  g
  KHJ33428.1 363 VLLLGDPGTAKSQLLKFVEKVAPIAIYTSG--KGSSAAGLTASVQRDASTREFYLEGGAMVlADggIVCIDEFDKMRDEDRVAIHEAMEQQTISIAkaG 459
                 678888888888888888777666554332..233456667777778888********976233559*************************9987225 PP

       AAA_3  96 ethklpepflvlatqnPi 113
                  t+ l+    vla+ nPi
  KHJ33428.1 460 ITTILNARTSVLAAANPI 477
                 6889*************8 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.1   0.00025      0.45      84     142 ..     415     475 ..     353     504 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00025
                      -BEHHHHHTTTSEEEEETGGGS-HHHHHHHHHHHHHSEE..ESBTSSSEEE--EEEEEEES CS
  Sigma54_activat  84 ekkGlfekadgGtlfLDeigelplelQekLlrvlqegev..ervGsskeikvdvriiaatn 142
                       + G++  adgG++ +De  ++  e  + + ++++++++   + G ++  ++ + ++aa+n
       KHJ33428.1 415 LEGGAMVLADGGIVCIDEFDKMRDEDRVAIHEAMEQQTIsiAKAGITTILNARTSVLAAAN 475
                      567999****************************999752268899999999999998887 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0        10   1.8e+04      79      98 ..      19      38 ..      17      43 .. 0.74
   2 ?   11.4   0.0   0.00018      0.33       1      75 [.     363     445 ..     363     486 .. 0.60

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 10
                CHHHHHHHHHHHHHHHHTTT CS
         AAA 79 seeeervvnqLlteldgvkk 98
                ++ + r++nqL +++ +++ 
  KHJ33428.1 19 DDTRGRIQNQLEQFILQFRL 38
                67788999999988877776 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00018
                 EEEESSTTSSHHHHHHHHHHHHTHEE.EEEETTTCS.SSSTTHHHHHHHHHHHHHHHTS..TSEEEEEETGGGHHHHH....T CS
         AAA   1 vllyGppGtGKTllakavakelgvef.leisgsell.skyvgesekkirelfkeakeka..kpsilfiDEidalaksr....s 75 
                 vll G pGt K+ l k v k + + +  + +gs+        ++ +++re+  e  ++   +  i+ iDE+d++  ++    +
  KHJ33428.1 363 VLLLGDPGTAKSQLLKFVEKVAPIAIyTSGKGSSAAgLTASVQRDASTREFYLEGGAMVlaDGGIVCIDEFDKMRDEDrvaiH 445
                 79******************9986653455566655222334444455555544333336455***********666632221 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   0.00016      0.28      21     120 ..     363     456 ..     355     461 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00016
      AAA_30  21 avltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLaeelgieastiakllkrlkgrarlepgtllivDEagmvdtkqlaallkaaekagakv 119
                 ++l G +Gt K+ +lk +++++  a    i  + +g  A+ L+++++ +ast + +l   +g++ l++g ++ +DE   +  ++  a+ +a+e++ +++
  KHJ33428.1 363 VLLLGDPGTAKSQLLKFVEKVAPIA----IYTSGKGSSAAGLTASVQRDASTREFYL--EGGAMVLADGGIVCIDEFDKMRDEDRVAIHEAMEQQTISI 455
                 6899***************999966....678999999**************99999..4455678899***********9999999999999987776 PP

      AAA_30 120 i 120
                  
  KHJ33428.1 456 A 456
                 5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (718 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 4856.54
//
Query:       KHJ33429.1  [L=1263]
Description: putative dead deah box helicase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-27   96.8   0.0    2.2e-27   96.0   0.0    1.5  1  DEAD        DEAD/DEAH box helicase
    5.5e-19   68.7   0.2    1.7e-18   67.2   0.2    1.9  1  DUF1998     Domain of unknown function (DUF1998)
    5.1e-13   49.3   0.0    2.2e-12   47.3   0.0    2.1  1  Helicase_C  Helicase conserved C-terminal domain
    1.1e-06   28.8   2.0    1.6e-06   28.2   0.0    2.1  2  ResIII      Type III restriction enzyme, res subunit
    0.00096   19.5   0.1    0.00096   19.5   0.1    2.1  2  CDT1        DNA replication factor CDT1 like


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.0   0.0     6e-31   2.2e-27       2     172 ..     478     652 ..     477     656 .. 0.89

  Alignments for each domain:
  == domain 1  score: 96.0 bits;  conditional E-value: 6e-31
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTST.SEEEEE..ETTSSHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxx..xxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyid.lrvlli..iggvaardqlskldng 97 
                 + Qaea++++ +g +v+va  T sGK+l++++pvl+++   + +++++al++ Pt++La+++ + lk++++y++ l++++i  + g+++   +++++ +
  KHJ33429.1 478 AHQAEAMNNLHDGYHVIVATSTSSGKSLIYQVPVLHEL---ECDRNTRALYIFPTKALAQDQKRSLKEMISYMRgLEEVMIetFDGDTEMIYRNRIRDE 573
                 68*********************************999...699999*************************55488886644669999*******999 PP

                 CSEEEEEHHHHHHHH....HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTST.TTSEEEEEESSBSHH CS
                 xxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx RF
        DEAD  98 vdivvgtpgrlddll....stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgk.lqrqvivlSATlpkd 172
                  +i++++p++l+  +    ++ +  l++++f+V+DE++ +    f+ ++  i+++l++i++     + ++i +SAT+ + 
  KHJ33429.1 574 GRIIFTNPDMLHITIlpqeERWRSFLKNLKFVVVDEIHVYNGL-FGSHVALIMRRLRRICAALGnHHLKFISCSATVANP 652
                 ************9666965344444*****************9.*************999987757777*******9865 PP

>> DUF1998  Domain of unknown function (DUF1998)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.2   0.2   4.7e-22   1.7e-18       1      83 []    1082    1180 ..    1082    1180 .. 0.90

  Alignments for each domain:
  == domain 1  score: 67.2 bits;  conditional E-value: 4.7e-22
     DUF1998    1 lehalinalplflqcdesdlgteckapedep...............rkrpariliydavp..gGaGiaekaaelleellraalelieecdCeeaGCp 80  
                  +eha+++++p f+ + ++d++teck+  +e+               rkrpar+++yd+++  gG+G+++ka+e++  ll++a+++i+ c+C  +GC 
  KHJ33429.1 1082 AEHAILSLVPNFVISMPGDVRTECKVGLKEFvvakarknrreeyspRKRPARLTFYDTKGgvGGSGLSTKAFEFIHLLLQQAVKRIDCCHCL-EGCV 1177
                  69***********************555544555555667788999**************999***********************999**8.**** PP

     DUF1998   81 aCl 83  
                  +C+
  KHJ33429.1 1178 ECV 1180
                  **8 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.3   0.0   6.1e-16   2.2e-12       5     110 ..     707     818 ..     703     819 .. 0.85

  Alignments for each domain:
  == domain 1  score: 47.3 bits;  conditional E-value: 6.1e-16
                 HHHHHHHHTTTTSEEEEEESSHHHHHH.....HHHHHHHT........TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEE CS
  Helicase_C   5 allellkleeeggkilifvntidrlek.....vklllekk........gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVin 90 
                  +++l+    +g +++ f++ ++ +e       +                +v  + g  + ++r++i +q+ +g+   +iat+++e G+di +++ Vi 
  KHJ33429.1 707 LFCQLI---LRGARVIAFCKVRKGCEAlvgaiKHE----LkdlgrpecMSRVMGYRGGYTPQDRRQIERQMFEGKLMGIIATTALELGVDIGSLDAVIT 798
                 455665...899***********997664333111....123456667799999********************************************* PP

                 SSSSSSHHHHHHHHTTSSST CS
  Helicase_C  91 fdlprnvtsyiqriGRtgRa 110
                 +++p++++++ q++GR+gR 
  KHJ33429.1 799 VGFPYSIANLRQQSGRAGRR 818
                 *******************6 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.7       0.7   2.5e+03      58     120 ..      31     108 ..      15     146 .. 0.55
   2 !   28.2   0.0   4.5e-10   1.6e-06       3     147 ..     475     616 ..     473     650 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.7
                 EEEESSHHHHHHHHHHG...GGGTGG......GEEEESSS-B--..................-SEEEEEHHHHHHTH.. CS
      ResIII  58 lflvprkslleqtleef...kkflseayke..igkkvsgdkkka...........kekdstnkkilvttiqsldadsee 120
                  ++v++k++++ t + +    + ls+++++  ++ ++++ +k++           +e+++ ++k    +i++l+++s++
  KHJ33429.1  31 TLVVHTKEVIKSTPSSLsllPQ-LSNDDDDdgTNANYHKPNKIQatgpqngldfnEEQNNLSIKTKNQQIEKLSKSSKK 108
                 5677777777777766622212.22222224555555555555555555565533233333333333344455555433 PP

  == domain 2  score: 28.2 bits;  conditional E-value: 4.5e-10
                 EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG.......GEEEESSS-B--.. CS
      ResIII   3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseayke...igkkvsgdkkka.k 97 
                 +++ +Q+ea++nl       +  +++++  T +GK+l++   + + l+  ++ ++l + p+k+l +  ++ +k+++s  +       + ++gd++++ +
  KHJ33429.1 475 KFYAHQAEAMNNLH------DGYHVIVATSTSSGKSLIYQVPVLHELECDRNTRALYIFPTKALAQDQKRSLKEMISYMRGLeevMIETFDGDTEMIyR 567
                 68899999999995......6679***************55555555556778****************999999987654377777889999999988 PP

                 ......-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS. CS
      ResIII  98 ekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak 147
                 ++ +++ +i++t+ ++l+  +   +ee+ +   ++ +++++DE H +++ 
  KHJ33429.1 568 NRIRDEGRIIFTNPDMLHITI-LPQEERWRSFLKNLKFVVVDEIHVYNGL 616
                 99999*************999.778888888888888********98874 PP

>> CDT1  DNA replication factor CDT1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.3         1   3.7e+03      64      97 ..      90     131 ..      86     150 .. 0.64
   2 !   19.5   0.1   2.7e-07   0.00096       2      68 ..     159     226 ..     158     317 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1
        CDT1  64 lkqekqlkefgssgkakaskyelviePnleddl........k 97 
                 l+++ +++++++ +k++++k+e ++ P l++          +
  KHJ33429.1  90 LSIKTKNQQIEKLSKSSKKKIEGDLDPELTKITsndtfgtsQ 131
                 566677778888899999999999999886655555555442 PP

  == domain 2  score: 19.5 bits;  conditional E-value: 2.7e-07
        CDT1   2 PskYevLlelFkaldtivsmlenrketit.fakvkkaVermsrksfeekhLaqiktvyPeayklkqek 68 
                 P  +++L+++ +al+ +  + ++rk+  t f+ +k aVe+ +++  e +++aqi ++ P+ +k+ +  
  KHJ33429.1 159 PEFFQRLEKTHQALNLVFTFCCTRKRLATkFDTIKSAVEAHINHPLEIQEVAQIVALRPTGIKFTYVD 226
                 667899*******************987769********************************99443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       801  (0.0446762); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.79u 0.26s 00:00:01.05 Elapsed: 00:00:00.42
# Mc/sec: 8941.38
//
Query:       KHJ33430.1  [L=418]
Description: putative aureobasidin resistance protein aur1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-24   85.3  13.9      4e-24   85.3  13.9    2.0  2  PAP2_3    PAP2 superfamily
    4.7e-09   36.1   5.5    4.7e-09   36.1   5.5    2.3  3  PAP2      PAP2 superfamily


Domain annotation for each model (and alignments):
>> PAP2_3  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   2.4      0.19   1.7e+03      40      84 ..      63     109 ..      36     145 .. 0.61
   2 !   85.3  13.9   4.5e-28     4e-24      18     190 .]     148     327 ..     134     327 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.19
      PAP2_3  40 hfqvtllvlvllf.lrrrerlreflttlllatll.gllvyalfPaag 84 
                 +++++++v+ l + ++    l+  +++ll+a+ll  ++  +++P+++
  KHJ33430.1  63 LILIVITVFCLSVsRAPGPILKTGAASLLIAVLLiPVTRQFFLPVLP 109
                 33344444444442333344444444555444442566666666666 PP

  == domain 2  score: 85.3 bits;  conditional E-value: 4.5e-28
      PAP2_3  18 lnklllahpa.lavilala.Yaslhfqvtllvlvllf.lrrrerlreflttlllatllgllvyalfPaagPrlleeagfvdtvaaaslagalrdgasra 113
                 l ++l ah++ + ++la++ Y +lhf  +++ ++l+f ++ +  +  f+ t+ ++++ g+++ + fP+ +P++ + +g+  +  + + +    +  + +
  KHJ33430.1 148 LSNILSAHQHsVLDLLAWIpYGILHFGGPFVWAALMFvCAPPGTVPVFAQTFGYLNIAGVAIQLIFPCSPPWYESMYGLAPANYSIKGSP-AGLRRIDE 245
                 55677788877999999999***************************************************9886666666555555555.33444444 PP

      PAP2_3 114 vllrgtienglaa.......fPSlHvawallvalalwrlrrkrllrvlalllnvlmivatvatgnHYlvDviaGvalalvaial 190
                 + + +  ++++ a       fPSlH + a+l a+++ +  +k   r+ +++++++m++at+++ +HY+vD+++G +la++a+++
  KHJ33430.1 246 LFGVDLYTSSFTAsplvfgaFPSLHSGNAVLEAFFMSHCFPKL--RLPVIIYAMWMWWATMYLSHHYAVDLVGGGMLAAIAFYI 327
                 44445444555545555677*********************99..************************************986 PP

>> PAP2  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       0.8   7.2e+03      86     101 ..      61      76 ..      32      77 .. 0.62
   2 ?   -2.7   1.8      0.51   4.5e+03      66      96 ..      88     115 ..      85     174 .. 0.62
   3 !   36.1   5.5   5.2e-13   4.7e-09      52     128 ..     262     329 ..     243     336 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.8
        PAP2  86 llalillllavlvals 101
                  ++ ++++ +++ ++s
  KHJ33430.1  61 KYLILIVITVFCLSVS 76 
                 3444444445555555 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.51
        PAP2  66 alalllalllrrkrkkig.....lvllalillllav 96 
                 a++l+++ll++  r+++      l        ++++
  KHJ33430.1  88 ASLLIAVLLIPVTRQFFLpvlpiL--------TWVL 115
                 555555555555555543222221........2222 PP

  == domain 3  score: 36.1 bits;  conditional E-value: 5.2e-13
        PAP2  52 akesfPSgHsafafalalllalllrrkrkkiglvllalillllavlvalsRlylgvHflsDvlaGlliGialaalay 128
                 ++  fPS Hs +a++ a+++++ ++++r +         ++++a +++++ +yl +H+  D+++G +++++ +++a+
  KHJ33430.1 262 VFGAFPSLHSGNAVLEAFFMSHCFPKLRLP---------VIIYAMWMWWATMYLSHHYAVDLVGGGMLAAIAFYIAK 329
                 56789*************************.........9*************************999999988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (418 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3023.93
//
Query:       KHJ33431.1  [L=429]
Description: putative eukaryotic translation initiation factor 3 subunit e [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-44  150.8   0.5    6.5e-44  149.6   0.1    1.9  2  eIF3_N    eIF3 subunit 6 N terminal domain
    4.6e-14   52.8   0.1    1.3e-13   51.3   0.1    1.8  1  PCI       PCI domain


Domain annotation for each model (and alignments):
>> eIF3_N  eIF3 subunit 6 N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.6   0.1   7.3e-48   6.5e-44       2     132 ..      10     140 ..       9     141 .. 0.99
   2 ?   -3.1   0.0       1.1   9.6e+03      26      36 ..     316     326 ..     297     349 .. 0.52

  Alignments for each domain:
  == domain 1  score: 149.6 bits;  conditional E-value: 7.3e-48
      eIF3_N   2 LtskllpyLDrHLvfpLLeflsekeiydeeellkaklellkkTnmvdyaadlykelegeeevpeelekkreevleeleeleeeaekvlelledeevvsn 100
                 L++kl+ yLDrHL++pLL+f++++e++++ e+ +a +ellkkTnm+dy+ +ly++leg ee p+e+++k+ ++++el ++ ee++k+++ll +e+vv+n
  KHJ33431.1  10 LLPKLVCYLDRHLIYPLLQFVADQEEEPSIETIRAMFELLKKTNMTDYVSSLYCQLEGIEEPPKEFNEKKVQIVAELGRFVEESQKITDLLGREDVVNN 108
                 99************************************************************************************************* PP

      eIF3_N 101 lrsdkkqnlefLkeehgitpemidalykfakF 132
                  rsdk++n++fLk++hg+t+e ++ ly+f++F
  KHJ33431.1 109 FRSDKVANMDFLKSQHGVTIEEVNILYDFGNF 140
                 *******************************9 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.1
      eIF3_N  26 eiydeeellka 36 
                 +  ++ee+l+ 
  KHJ33431.1 316 KLTEAEEVLRT 326
                 22233444444 PP

>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   0.1   1.5e-17   1.3e-13       2     104 ..     296     399 ..     295     400 .. 0.90

  Alignments for each domain:
  == domain 1  score: 51.3 bits;  conditional E-value: 1.5e-17
                 HHHHHHHHHHHTS.HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTTT CS
         PCI   2 sysdllkalrsgn.lsgfseelkdleeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIrdgeirakidqesg 99 
                 +++d++kal+    ++++++ l + ee l  d +la   +s+ + +r+   ++++ki+++i++++l+  l+l++de Ek++v+lIrd +++akid ++g
  KHJ33431.1 296 PITDFVKALYIDFdFEEAQKKLTEAEEVLRTDFFLALKSDSFIDAARHLISESYCKIHHRIDIKDLSARLGLNQDEGEKWIVNLIRDTRLDAKIDYKEG 394
                 56777777776555***********8888888899999999999999999999********************************************** PP

                 EEEEC CS
         PCI 100 ivvfk 104
                 +v ++
  KHJ33431.1 395 TVLMN 399
                 **986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       554  (0.0308997); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3304.57
//
Query:       KHJ33432.1  [L=246]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       945  (0.0527079); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 1968.96
//
Query:       KHJ33433.1  [L=201]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1511.85
//
Query:       KHJ33434.1  [L=160]
Description: putative isochorismatase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.4e-17   62.8   0.0    7.1e-17   62.1   0.0    1.4  1  Isochorismatase  Isochorismatase family


Domain annotation for each model (and alignments):
>> Isochorismatase  Isochorismatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   0.0     4e-21   7.1e-17      34     174 ..       2     120 ..       1     121 [. 0.90

  Alignments for each domain:
  == domain 1  score: 62.1 bits;  conditional E-value: 4e-21
  Isochorismatase  34 lkaarkagipviftrdvheleevkgdlderkaaphfkpgttgaelvpelaplegdvvvdKtrfsafagtdldeiLkelgiktivlaGiatdvCV 127
                      l+aa  ++ipv +t+++ +                     +  e + el+ +     vdK  fs++ ++ +    +++   +i ++Gi+ ++C+
       KHJ33434.1   2 LQAASILSIPVYATTQNRN---------------------RLGETCSELNLKNAIENVDKMAFSMW-TPAVARHFRRETPAEIAIVGIESHICI 73 
                      5677777888888888888.....................66666667777777789*********.*************************** PP

  Isochorismatase 128 eatardaldlGyevvvvsDAvaalspelhdaalkrlkqafatvitte 174
                        t++d+l +G++v++++D+v+++++e+   alkrl++ +a+v+t+e
       KHJ33434.1  74 TLTTLDLLANGHKVYILADGVSSRNREEIPLALKRLQAEGAVVTTSE 120
                      *********************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1246.19
//
Query:       KHJ33435.1  [L=253]
Description: hypothetical protein EV44_g4304 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       960  (0.0535445); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 2029.93
//
Query:       KHJ33436.1  [L=180]
Description: putative cytosolic fe-s cluster assembling factor nbp35 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.1e-55  187.3   0.7    3.5e-55  187.1   0.7    1.0  1  ParA         NUBPL iron-transfer P-loop NTPase
    2.3e-08   34.1   0.0    3.2e-08   33.7   0.0    1.4  1  CbiA         CobQ/CobB/MinD/ParA nucleotide binding domain
    2.3e-08   34.1   0.1    2.1e-07   31.0   0.0    2.0  2  AAA_31       AAA domain
    2.4e-05   23.8   0.0    2.9e-05   23.5   0.0    1.4  1  MipZ         ATPase MipZ
    0.00017   20.9   0.2     0.0094   15.2   0.2    2.1  2  ArsA_ATPase  Anion-transporting ATPase
     0.0042   16.7   0.0     0.0081   15.8   0.0    1.5  2  AAA_25       AAA domain
  ------ inclusion threshold ------
      0.049   13.4   0.0      0.067   13.0   0.0    1.3  1  CLP1_P       mRNA cleavage and polyadenylation factor CLP1 P-
      0.072   12.6   0.1       0.49    9.8   0.1    1.9  2  CBP_BcsQ     Cellulose biosynthesis protein BcsQ


Domain annotation for each model (and alignments):
>> ParA  NUBPL iron-transfer P-loop NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.1   0.7   1.6e-58   3.5e-55       2     139 ..      42     178 ..      41     180 .] 0.96

  Alignments for each domain:
  == domain 1  score: 187.1 bits;  conditional E-value: 1.6e-58
        ParA   2 vkkviavlSgKGGVGKStvavnlAlaLakkglkvgllDaDiyGpsiprllgveeekpeqsekkliPveakgikvmSigfllesedeavvwrGpmkskai 100
                 v+kviav+S+KGGVGKSt+avnlAl+ ++ g+++g+lD+Di+Gpsip+l+++++e   + +++l+P++++g+k+mS+g+l+  e+++vvwrG m++ka+
  KHJ33436.1  42 VEKVIAVSSAKGGVGKSTIAVNLALEYTRLGFRTGVLDTDIFGPSIPTLMNLSGEPRLSPNNRLLPLSNYGVKTMSMGYLVG-ESAPVVWRGLMIMKAL 139
                 899***************************************************855555889******************9.**************** PP

        ParA 101 kqllkdvewgelDyLiiDlPPGtgDeqltvaqklplaga 139
                 +qll++v+wg lD+Li+DlPPGtgD+qlt++q++ l+g+
  KHJ33436.1 140 QQLLHEVDWGGLDVLILDLPPGTGDTQLTITQQIILDGI 178
                 **********************************98886 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.0   1.4e-11   3.2e-08       1      51 [.      46      96 ..      46     169 .. 0.80

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 1.4e-11
                EEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEEEESSCCCCHHTTEB-H CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA  1 iaiastkGGvGKTtlaanLaralarrglrVllvDaDpqannlaileglend 51
                ia+ s kGGvGK+t+a+nLa    r g+r+ ++D+D  +++  +l+ l+++
  KHJ33436.1 46 IAVSSAKGGVGKSTIAVNLALEYTRLGFRTGVLDTDIFGPSIPTLMNLSGE 96
                7999********************************999998876666665 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0   9.4e-11   2.1e-07       2      39 ..      44      81 ..      43      91 .. 0.95
   2 ?    1.1   0.0      0.14   3.1e+02     106     130 ..     138     163 ..     107     175 .. 0.78

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 9.4e-11
      AAA_31  2 kvIaianqKGGvGKTTtsvnlaaalaklgkkvLlvDlD 39
                kvIa++  KGGvGK+T +vnla   ++lg ++ + D D
  KHJ33436.1 44 KVIAVSSAKGGVGKSTIAVNLALEYTRLGFRTGVLDTD 81
                9*********************************9999 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.14
      AAA_31 106 ilkellekvkde.YDyiiiDcpPsLg 130
                 +l++ll++v+    D+ i+D pP  g
  KHJ33436.1 138 ALQQLLHEVDWGgLDVLILDLPPGTG 163
                 46667777765448999999999765 PP

>> MipZ  ATPase MipZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   1.3e-08   2.9e-05       2      40 ..      45      83 ..      44     176 .. 0.86

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 1.3e-08
                EEEE--SSTTSSHHHHHHHHHHHHHTTT--EEEEE--TT CS
        MipZ  2 vivlgnekGGsGksttavhvavaLlkkGarvaaidldlr 40
                vi ++  kGG Gkst+av +a   ++ G+r +++d d+ 
  KHJ33436.1 45 VIAVSSAKGGVGKSTIAVNLALEYTRLGFRTGVLDTDIF 83
                89999******************************9985 PP

>> ArsA_ATPase  Anion-transporting ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.2   4.2e-06    0.0094       7      38 ..      50      81 ..      43      87 .. 0.87
   2 ?    3.8   0.0     0.012        28     112     138 ..     138     165 ..     127     174 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 4.2e-06
                 EESTTSSHHHHHHHHHHHHHHTTS-EEEEE-S CS
  ArsA_ATPase  7 gGKGGVGKttvsaatavklsekgkkvllistD 38
                 + KGGVGK+t++  +a++ ++ g ++ ++ tD
   KHJ33436.1 50 SAKGGVGKSTIAVNLALEYTRLGFRTGVLDTD 81
                 67***********************9999998 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.012
                  HHHHHHHHHHCSSSSEEEEESBS.CCHT CS
  ArsA_ATPase 112 sfeellkyvkeeeydvvvlDtaP.TGht 138
                  ++++ll++v+    dv++lD +P TG+t
   KHJ33436.1 138 ALQQLLHEVDWGGLDVLILDLPPgTGDT 165
                  68889999999999********988887 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   3.6e-06    0.0081      32      59 ..      43      71 ..      30     107 .. 0.85
   2 ?   -2.1   0.0       1.1   2.4e+03     126     149 ..     135     157 ..     113     158 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 3.6e-06
      AAA_25 32 agelallaGapgtGKttlaldlalava.t 59
                ++ +a+  + +g+GK+t+a++lal+++ +
  KHJ33436.1 43 EKVIAVSSAKGGVGKSTIAVNLALEYTrL 71
                66788889****************99953 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.1
      AAA_25 126 ltadvdaleaaieevegvrlvviD 149
                 +  ++++l  +++   g++++++D
  KHJ33436.1 135 IMKALQQLLHEVDW-GGLDVLILD 157
                 55677788888887.888888888 PP

>> CLP1_P  mRNA cleavage and polyadenylation factor CLP1 P-loop
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0     3e-05     0.067       4      41 ..      54      89 ..      52     159 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3e-05
      CLP1_P  4 dsGKSTlarlLlNyalrkgrkpvyvDlDvGqseispPg 41
                 +GKST+a +L+ + +r g ++ ++D+D+  ++i    
  KHJ33436.1 54 GVGKSTIAVNLALEYTRLGFRTGVLDTDIFGPSIP--T 89
                59**************************9877743..3 PP

>> CBP_BcsQ  Cellulose biosynthesis protein BcsQ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   0.00022      0.49       2      37 ..      44      79 ..      43      83 .. 0.89
   2 ?    0.6   0.0      0.14   3.1e+02     107     133 ..     137     168 ..     104     175 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00022
    CBP_BcsQ  2 kvlalqGvRGGvGttsllaaLawalhelgesvlviD 37
                kv+a++  +GGvG++++++ La    +lg +  v+D
  KHJ33436.1 44 KVIAVSSAKGGVGKSTIAVNLALEYTRLGFRTGVLD 79
                689999*******************99998877777 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.14
    CBP_BcsQ 107 aalkelkeqyrw.....illDlpagasaltre 133
                 +al++l ++ +w     ++lDlp g+ +++ +
  KHJ33436.1 137 KALQQLLHEVDWggldvLILDLPPGTGDTQLT 168
                 45555554444444333889999988776554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       276  (0.0153941); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1325.00
//
Query:       KHJ33437.1  [L=515]
Description: putative transcription factor aatf che-1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.3e-26   91.6   0.4    3.3e-26   91.6   0.4    3.1  3  TRAUB      Apoptosis-antagonizing transcription factor, C-ter
    5.5e-22   79.0   6.8    5.5e-22   79.0   6.8    2.9  2  AATF-Che1  Apoptosis antagonizing transcription factor


Domain annotation for each model (and alignments):
>> TRAUB  Apoptosis-antagonizing transcription factor, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.16   1.5e+03      34      54 ..     221     241 ..     187     245 .. 0.50
   2 ?   -2.8   0.1         1   9.3e+03      51      51 ..     317     317 ..     286     342 .. 0.49
   3 !   91.6   0.4   3.6e-30   3.3e-26       1      85 []     415     501 ..     415     501 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.16
       TRAUB  34 kkkkkkkkvDtkaSKGRklrY 54 
                 ++ +k      +a K+ ++r+
  KHJ33437.1 221 SQAAKVDAEKGRAIKSQQMRF 241
                 222221222357777777777 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1
       TRAUB  51 k 51 
                 k
  KHJ33437.1 317 K 317
                 1 PP

  == domain 3  score: 91.6 bits;  conditional E-value: 3.6e-30
       TRAUB   1 YqqLLkelvekksaessaa.asds...rqllalqklrkkkkkkkkvDtkaSKGRklrYevheklqNFmapeergkweeeqidelfasLl 85 
                 Yq LLkelve++ +e s+   + s   +q+  ++++++ k + k vD++aSKGRk+r++vheklqNF ape+r++we+ ++++lfasLl
  KHJ33437.1 415 YQMLLKELVEQRRSELSSMpVT-SttdNQIKPWTAIKEPKVR-KVVDKRASKGRKMRFTVHEKLQNFAAPEDRSSWEQLAVNRLFASLL 501
                 9************998854222.2245677779999999999.79*******************************************8 PP

>> AATF-Che1  Apoptosis antagonizing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   4.0     0.063   5.7e+02      49     127 ..     131     218 ..      89     224 .. 0.55
   2 !   79.0   6.8   6.1e-26   5.5e-22       1     139 []     227     347 ..     227     347 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.063
   AATF-Che1  49 eefeealeeaekalkklleslleLreelleqneikkla.....................eskeeeekkkskrkrkkkkkeetsleelwkeleklekalk 126
                 +++ee++ +  k+++k  +++++L                                   +s++++++   ++  ++++ke  + +e+ + +e+ +ka+ 
  KHJ33437.1 131 SDLEEQIPSKVKNTSKYSKEVTSLE------------GenklpknhetdhldnnysdisDSSDSDHDRCDSNFSNRNDKEIIKRSEIQRFMEEDQKAIL 217
                 2233333333333333333333333............02222222222333366666665555566666666666777777777888888888777776 PP

   AATF-Che1 127 p 127
                 +
  KHJ33437.1 218 S 218
                 5 PP

  == domain 2  score: 79.0 bits;  conditional E-value: 6.1e-26
   AATF-Che1   1 DaeKGkaVknQlklwDslLelRIklQkaltaanqLpqpetlkeflesseefeealeeaekalkklleslleLreelleqneikklaeskeeeekkkskr 99 
                 DaeKG+a+k+Q++ +DslL++R+ lQkal a+n+L + ++ +++ +++    + +e+ae+a+ kl++ l+e+r++l  ++++            ++++r
  KHJ33437.1 227 DAEKGRAIKSQQMRFDSLLNTRMELQKALIAVNSLTTFQDDNSIFSKD----KPYEAAEEAALKLWNRLFEFRNNL--SKPT------------TTHER 307
                 89**********************************988888887755....9***********************..3332............22345 PP

   AATF-Che1 100 krkkkkkeetsleelwkeleklekalkpfrnatldkWseK 139
                  rk   ++++ ++ +w+++++le+a    r+++++kWs K
  KHJ33437.1 308 ARKIITSDQKLSSAMWEKMKNLESASIDDRQKIIEKWSIK 347
                 554444544555669**********************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1388  (0.0774165); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3632.11
//
Query:       KHJ33438.1  [L=341]
Description: putative duf455 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-68  230.9   1.3    3.5e-68  230.7   1.3    1.0  1  DUF572    Family of unknown function (DUF572)
  ------ inclusion threshold ------
       0.13   12.7   3.7       0.25   11.8   3.7    1.4  1  FlgN      FlgN protein


Domain annotation for each model (and alignments):
>> DUF572  Family of unknown function (DUF572)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  230.7   1.3   3.9e-72   3.5e-68       1     274 [.       8     321 ..       8     337 .. 0.82

  Alignments for each domain:
  == domain 1  score: 230.7 bits;  conditional E-value: 3.9e-72
      DUF572   1 kYyPPDfdpski.......palrekar.lknrqlvvRlmaPfnmrCktC..geyIykGvkFNarKekVgnetYlgipIfrFyikCtrClneitfkTDPk 89 
                 +Y+PPD +  k+       +al+++ar +++++l+vR+++P++++C+tC   ++I++Gv+FNa+K+k g   Y++ pI++F++k+++C+++i+++TDPk
  KHJ33438.1   8 RYVPPDQEGIKTgnqlhgkHALGARARkISQGILTVRFEMPYSIWCTTCpkPTIIGQGVRFNAEKKKEGY--YYSSPIYSFRMKHAACGGWIEIRTDPK 104
                 7*******9999***************9*********************9889*************9999..*************************** PP

      DUF572  90 ntdYvveeGatRnfkaekleeeea..kreekekeeeeaedamkklEkrtkdskkemealesLeeLqelnqrqakvdfdanlelrkefreekkereeeee 186
                 nt Yvv+eGa++  ++  + +ee   k   ++++++ +++a+++lE+++++++  ++a+++LeeL++l+++q+++++++n +lr+ fre +k+re+e +
  KHJ33438.1 105 NTAYVVTEGARK--RDCGEDKEEChiKLLTEKERDTLRKNAFAALEHNVNEKQICAQAKKRLEELHDLSEKQWDDPYEKNKRLRNTFREGRKQRERESK 201
                 ***********9..777655555444777777778889************************************************************* PP

      DUF572 187 deealkekislekikllpedeedekkaklle.gkte..............slfasseesaksakk.kpt.kkesskekkkeslekklskltkkkad... 265
                  ++ l+ek+s    +llped++d k+a l+e g  +              s+f+ss  + ++    + + k e ++ +k +    ++ ++t+++ d   
  KHJ33438.1 202 INSSLQEKMSF-GYDLLPEDSNDVKRAGLVEfGVVDidlaikkatskplfSIFDSSLVPMSNPPIlRRKnKAEEASLRKTAAIVAEIHNNTRAAIDpfl 299
                 *********88.*******************76666878888888888885555555544443333333232444444455555555555554444666 PP

      DUF572 266 .............sslvvrKkk 274
                               ++v+rK++
  KHJ33438.1 300 pgnrssnfassklLTGVKRKQP 321
                 6666666666655555555554 PP

>> FlgN  FlgN protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   3.7   2.8e-05      0.25      24      83 ..     131     191 ..     125     210 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.8e-05
                 HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--.SCHHHHHHHHCT CS
        FlgN  24 lleeEteaLkagdieaLeelleekqellekleqleqkrakllaelgls.aeeatlsellak 83 
                 l+e+E++ L+++  +aLe+ ++ekq ++++ ++le+  + + ++   + ++++ l++  ++
  KHJ33438.1 131 LTEKERDTLRKNAFAALEHNVNEKQICAQAKKRLEELHDLSEKQWDDPyEKNKRLRNTFRE 191
                 89*********************************99999888888887777777777664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       809  (0.0451224); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2535.81
//
Query:       KHJ33439.1  [L=289]
Description: putative splicing factor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-06   28.1   0.0    2.5e-06   27.2   0.0    1.5  1  Tudor_3       DNA repair protein Crb2 Tudor domain
    0.00057   19.9   0.0     0.0012   18.9   0.0    1.5  1  DUF4537       Domain of unknown function (DUF4537)
  ------ inclusion threshold ------
      0.013   15.6   1.0      0.022   14.8   1.0    1.3  1  DUF2730       Protein of unknown function (DUF2730)
      0.047   13.7   2.0      0.087   12.8   2.0    1.5  1  FlxA          FlxA-like protein
      0.057   13.9   2.1      0.095   13.2   2.1    1.4  1  APG6_N        Apg6 coiled-coil region
       0.14   12.4   2.5        1.1    9.5   0.1    2.2  2  DUF5082       Domain of unknown function (DUF5082)
       0.14   12.2   0.5       0.27   11.3   0.5    1.4  1  Fis1_TPR_C    Fis1 C-terminal tetratricopeptide repeat
       0.37   11.2   1.8       0.71   10.3   1.8    1.5  1  CCDC-167      Coiled-coil domain-containing protein 167
       0.39   11.3   2.6       0.87   10.2   2.1    1.9  2  Syntaxin-6_N  Syntaxin 6, N-terminal
        1.1    9.2   3.6         18    5.3   0.1    3.1  4  PKcGMP_CC     Coiled-coil N-terminus of cGMP-dependent protei


Domain annotation for each model (and alignments):
>> Tudor_3  DNA repair protein Crb2 Tudor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.0   1.4e-09   2.5e-06       3      50 ..     103     152 ..     101     154 .. 0.88

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 1.4e-09
                 GEEEEE-SSSS--EEEEEEEEEEE-SSS.EEEEEETTS.-EEEEETTSEE CS
     Tudor_3   3 nrVfAlfkGkkraYYPAtclgvsssgsq.rykVrFdDg.tpeevdskqvr 50 
                 + V+A + + ++++YPA++ + ++s++   y V+F  + ++e++ +k ++
  KHJ33439.1 103 DTVLAKWHSGDKGFYPARITSITGSSTApVYIVKFRSYnATETLRAKDIK 152
                 68************************99********99667777776666 PP

>> DUF4537  Domain of unknown function (DUF4537)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   6.5e-07    0.0012      46     102 ..      89     147 ..      75     159 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 6.5e-07
     DUF4537  46 ialedakehslkvgDkVLAlhdpeeqeYvPGiVlagp.sakeeeltVrfydgk.kakvp 102
                  a+++ +  s kv+D+VLA++ +++  ++P+ ++++  s++   + V+f + + +++++
  KHJ33439.1  89 TAVDEEVPSSFKVNDTVLAKWHSGDKGFYPARITSITgSSTAPVYIVKFRSYNaTETLR 147
                 55666667899***********************9998888889999987655344455 PP

>> DUF2730  Protein of unknown function (DUF2730)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   1.0   1.2e-05     0.022      34      90 ..       4      60 ..       2      65 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.2e-05
     DUF2730 34 dleklaekveendkrlteletkvenLPtakdlekLkllladlrgelkaleaevrqls 90
                ++++l+++++e++ +l++++  ++  P +++l++Lk++l+++   ++a+ ae++ +s
  KHJ33439.1  4 QIATLENEIKEYKVQLETVQLGLQADPENSELQELKTELEQVISLTEATIAELKPVS 60
                678999***************************************999999998876 PP

>> FlxA  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   2.0   4.9e-05     0.087      16      72 ..       2      60 ..       1      91 [. 0.76

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.9e-05
        FlxA 16 asqiasLqkQiknlqkqLkelses..deltkeekkkqqqliqaQIqqlqaQIaqlqqqq 72
                ++qia+L+++ik+++ qL+ ++     +  + e ++ + ++++ I+  +a Ia l+   
  KHJ33439.1  2 SNQIATLENEIKEYKVQLETVQLGlqADPENSELQELKTELEQVISLTEATIAELKPVS 60
                78*****************988876444444568899***************9987655 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   2.1   5.3e-05     0.095      14      73 ..       1      59 [.       1      80 [. 0.86

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 5.3e-05
      APG6_N 14 ldkqleqaekerdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLkel 73
                + +q++++e+e+++Y+  l++++   + +  +++el+el+ ele++ +  e+ ++eLk +
  KHJ33439.1  1 MSNQIATLENEIKEYKVQLETVQLGLQAD-PENSELQELKTELEQVISLTEATIAELKPV 59
                7899*******************774444.3689***********************965 PP

>> DUF5082  Domain of unknown function (DUF5082)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.3     0.073   1.3e+02      90     108 ..       5      23 ..       1      29 [. 0.45
   2 ?    9.5   0.1   0.00064       1.1       5      56 ..      32      85 ..      28      90 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.073
     DUF5082  90 idaieeEIerLenqiseaq 108
                 i+ +e+EI++++ q+++ q
  KHJ33439.1   5 IATLENEIKEYKVQLETVQ 23 
                 3344444444444444443 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00064
     DUF5082  5 isklqaqiaelrseiaaleekIerLk..eaktklsdekeslkqkkkklekplns 56
                 s+lq+ + el++ i+ +e  I++Lk  ++ t++s++++ +k+k +  ++p+++
  KHJ33439.1 32 NSELQELKTELEQVISLTEATIAELKpvSVPTAVSKKQAPAKEKWSRENHPAFK 85
                5789999*******************8888899999999999998888887766 PP

>> Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.5   0.00015      0.27      14      48 ..      12      46 ..       9      48 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00015
                HT-HHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHH CS
  Fis1_TPR_C 14 lgeYseArryvdalLeiEPenrQaqsLkeliedki 48
                ++eY+  ++ v+  L+ +Pen+  q+Lk+ +e+ i
  KHJ33439.1 12 IKEYKVQLETVQLGLQADPENSELQELKTELEQVI 46
                6899999**********************999766 PP

>> CCDC-167  Coiled-coil domain-containing protein 167
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   1.8   0.00039      0.71       4      50 ..       3      48 ..       1      60 [. 0.72

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00039
    CCDC-167  4 seIdkleeklascrerLeaverrlrkeelseeeResleeEeaslkeq 50
                ++I +le+++++++ +Le+v   l+ +   +e  ++l++E++++ + 
  KHJ33439.1  3 NQIATLENEIKEYKVQLETVQLGLQADPENSE-LQELKTELEQVISL 48
                69********************9986544433.46666666665544 PP

>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   2.1   0.00049      0.87      13      80 ..       4      80 ..       1      97 [. 0.62
   2 ?   -1.6   0.0       2.2     4e+03       6      25 ..      91     110 ..      89     114 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00049
  Syntaxin-6_N 13 slnkaeslyrrwe.rlledtss.s...tseeldetrteLrkalrsiewdledLeetv..riv..eknpskfkideke 80
                  ++ ++e+ +++++ +l +++   +   +++el+e++teL++ ++  e ++ +L+ +    +v  ++ p+k k + + 
    KHJ33439.1  4 QIATLENEIKEYKvQLETVQLGlQadpENSELQELKTELEQVISLTEATIAELKPVSvpTAVskKQAPAKEKWSREN 80
                  56677777777743444443333134489************************975422222223334555555554 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.2
  Syntaxin-6_N   6 vkeeVqkslnkaeslyrrwe 25 
                   v eeV +s + + +++++w+
    KHJ33439.1  91 VDEEVPSSFKVNDTVLAKWH 110
                   88999999999999999996 PP

>> PKcGMP_CC  Coiled-coil N-terminus of cGMP-dependent protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.033        59      15      32 ..       3      20 ..       1      23 [. 0.86
   2 ?    0.6   0.1      0.29   5.2e+02      23      31 ..      34      42 ..      32      43 .. 0.85
   3 ?    5.3   0.1      0.01        18      12      28 ..      41      57 ..      40      58 .. 0.96
   4 ?   -2.9   0.0       3.7   6.6e+03       3       9 ..     146     152 ..     145     152 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.033
   PKcGMP_CC 15 krlaekdeEIqELrskLD 32
                +++a  + EI+E + +L 
  KHJ33439.1  3 NQIATLENEIKEYKVQLE 20
                799999********9995 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.29
   PKcGMP_CC 23 EIqELrskL 31
                E qEL++ L
  KHJ33439.1 34 ELQELKTEL 42
                89****988 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.01
   PKcGMP_CC 12 ELEkrlaekdeEIqELr 28
                ELE+ ++  ++ I+EL+
  KHJ33439.1 41 ELEQVISLTEATIAELK 57
                9***************9 PP

  == domain 4  score: -2.9 bits;  conditional E-value: 3.7
   PKcGMP_CC   3 lllKDER 9  
                 l++KD++
  KHJ33439.1 146 LRAKDIK 152
                 7899987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       843  (0.0470188); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2082.20
//
Query:       KHJ33440.1  [L=294]
Description: putative enoyl- hydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.4e-77  258.0   0.0    8.5e-77  257.8   0.0    1.0  1  ECH_1          Enoyl-CoA hydratase/isomerase
    6.2e-37  127.8   0.8    1.3e-32  113.7   0.1    2.1  2  ECH_2          Enoyl-CoA hydratase/isomerase
  ------ inclusion threshold ------
      0.079   12.6   0.0       0.12   12.0   0.0    1.2  1  DUF4255        Protein of unknown function (DUF4255)
      0.085   12.8   0.0          1    9.3   0.0    2.2  2  Peptidase_S49  Peptidase family S49


Domain annotation for each model (and alignments):
>> ECH_1  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.8   0.0   1.9e-80   8.5e-77       5     250 ..      48     293 ..      44     294 .] 0.97

  Alignments for each domain:
  == domain 1  score: 257.8 bits;  conditional E-value: 1.9e-80
                 TEEEEEE--CGCTTEE-HHHHHHHHHHHHHHHHSTTECEEEEEEBTSEEEEEB-HHHHHHHHCHHHHHHHCCHHHHHHHHHH.SSSEEEEEE-SEEETH CS
       ECH_1   5 gvaviklnrPeavNalsaelltEliqalekleddksvravvLtGgdkaFaaGadlkemaeeekakqallkeevlelwtklyt.vpkpviaavnGaaigG 102
                 gv +i+lnrP a+Nals  ++ E+ +al++++ ++ v a++LtG++k FaaGad+kem +   ++ + + +++ elw++ +t v+kpviaav+G+a+gG
  KHJ33440.1  48 GVGQITLNRPSALNALSTPMMIEIGEALQRFDRNPIVAAIILTGSQKSFAAGADIKEMSNL--SFSEAYTNSFIELWSAFTTsVKKPVIAAVSGHALGG 144
                 89**********************************************************7..8**************9865289************** PP

                 HHHHHHHSSEEEEETTTEEE-GGGGGTS--CTTCHHHHHHHHHHHHHHHHHHHT-EEEHHHHHHCTSSSEEESG.GGHHHHHHHHHHHHHHSCHHHHHH CS
       ECH_1 103 GlelalacDiviaadnasfglnelklGlipgaggtqilarkvGkskAeeilllgkkisaqealkvGlvdkvvpe.eqlleealelaeklaekspaalrq 200
                 G+elal+cDi+++ ++a fg++e+klG+ipgagg+q+l+r++Gks+A+e++l+g+ +s+ ea ++G+  + +   ++l e +l+laek+a++s++a+ +
  KHJ33440.1 145 GCELALMCDIIYCTESAIFGQPEIKLGTIPGAGGSQRLTRAIGKSRAMELILTGETFSGREAVNMGVAARSFGSwDDLIEGTLKLAEKIAKHSRLAVMA 243
                 ********************************************************************9988888************************ PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHCTSHHHHHHHHHHHTCSH----- CS
       ECH_1 201 lkealnakledalaeqleaeaklfestfskddikeGlqaflEkrkpefed 250
                 +ke +n+  +  l e++e e++lf+s+f ++d k G++af+Ek+kpe++ 
  KHJ33440.1 244 AKEVVNKSQDLPLREGIEYERRLFHSLFGSADQKIGMKAFVEKKKPEWTH 293
                 ************************************************86 PP

>> ECH_2  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.7   0.1   2.8e-36   1.3e-32       2     170 ..      50     214 ..      49     224 .. 0.91
   2 !   13.0   0.0   1.2e-05     0.053     251     319 ..     228     293 ..     220     294 .] 0.91

  Alignments for each domain:
  == domain 1  score: 113.7 bits;  conditional E-value: 2.8e-36
                 EEEEE--GGGTT-B-HHHHHHHHHHHHHHCC-TT-SEEEEEESSSSECE--B--HHHHHHHHCS-THHHHHHHHHHHHHHHHHC-SS-EEEEE-BEEET CS
       ECH_2   2 gvitLnrpkalNaLslemvralkealkewekddevklvvlkgagekafCAGgDvralyeaakegkkeeeeffreeYklnyliatypkpvvalmdGivmG 100
                 g itLnrp+alNaLs++m+ ++ eal+++++++ v++++l+g+ +k+f AG D++++ +   +++ +  + f e ++  +   +++kpv+a + G ++G
  KHJ33440.1  50 GQITLNRPSALNALSTPMMIEIGEALQRFDRNPIVAAIILTGS-QKSFAAGADIKEMSNLSFSEAYT--NSFIELWS--AFTTSVKKPVIAAVSGHALG 143
                 78****************************************5.5**************99997755..34555544..456789************** PP

                 HHHHHHTTSSEEEE-TT-EEE--GGGGT----TTHHHHHHCSST.THHHHHHHH---B-HHHHHHTTS--E CS
       ECH_2 101 gGvGlsvhgsfrvvtertvfAmPEtaIGlfPDvGgsyfLsrlpg.elGlylalTGarlkgadalaaglath 170
                 gG+ l++ + +   te+++f  PE+++G +P  Ggs  L+r+ g + ++ l lTG++++g++a+++g+a  
  KHJ33440.1 144 GGCELALMCDIIYCTESAIFGQPEIKLGTIPGAGGSQRLTRAIGkSRAMELILTGETFSGREAVNMGVAAR 214
                 *****************************************97647799*******************976 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 1.2e-05
                 HHHHHHHHS-HHHHHHHHHHHHHHTTT--HHHHHHHHHHHHHHHHHHSSHHHHHHHHTTS-------SS CS
       ECH_2 251 ktletlkkrsPtslkvtleqlrrgrklsslaevlrmElrlalrllaekDfveGvrallvdkdkkPkWkp 319
                 k +e+++k+s +++ ++ e ++++++l  l+e ++ E rl ++l+ + D   G +a + +k kkP+W++
  KHJ33440.1 228 KLAEKIAKHSRLAVMAAKEVVNKSQDLP-LREGIEYERRLFHSLFGSADQKIGMKAFV-EK-KKPEWTH 293
                 67899**********************7.*************************9975.55.58***87 PP

>> DUF4255  Protein of unknown function (DUF4255)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.7e-05      0.12      98     151 ..      71     129 ..      53     137 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.7e-05
     DUF4255  98 LgralqaLhdnpvlprealpa.....aglaeqperlrialeslsleelselWsalggky 151
                 +g+alq + +np++ +  l++     a+ a+ +e   +++ ++ ++++ elWsa+ ++ 
  KHJ33440.1  71 IGEALQRFDRNPIVAAIILTGsqksfAAGADIKEMSNLSFSEAYTNSFIELWSAFTTSV 129
                 89************************99***************************7654 PP

>> Peptidase_S49  Peptidase family S49
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00023         1       5      40 ..     129     164 ..     125     166 .. 0.93
   2 ?    0.9   0.0     0.089     4e+02     113     146 ..     191     225 ..     182     232 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00023
                    TT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE CS
  Peptidase_S49   5 akkPvvasaenvaaSggYylasaadkivanpstivg 40 
                     kkPv+a +++ a  gg  la ++d i+ + s+i g
     KHJ33440.1 129 VKKPVIAAVSGHALGGGCELALMCDIIYCTESAIFG 164
                    69*****************************99977 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.089
                    HHHCHHCCHEEEHHHHHHTTSSSE.ETSHHHHHHH CS
  Peptidase_S49 113 qvdkiAegrvltgqqAlklgLvde.lgtvddavae 146
                    +++ i +g+ ++g++A++ g + +  g++dd+++ 
     KHJ33440.1 191 AMELILTGETFSGREAVNMGVAARsFGSWDDLIEG 225
                    56667789***********9976427888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2170.91
//
Query:       KHJ33441.1  [L=731]
Description: putative arm repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-55  187.5   1.8    4.8e-55  186.2   1.8    1.7  1  RIX1      rRNA processing/ribosome biogenesis


Domain annotation for each model (and alignments):
>> RIX1  rRNA processing/ribosome biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.2   1.8   2.7e-59   4.8e-55       1     186 [.       6     211 ..       6     213 .. 0.98

  Alignments for each domain:
  == domain 1  score: 186.2 bits;  conditional E-value: 2.7e-59
        RIX1   1 klrvllnrLsstppkelpsilstlashkllceellkselee........lvhklvtrilsLlqskspegrwaGvcLakvtveesgeellssgstWlral 91 
                 +lrvl+ ++ss p+ elps+l++l++++l c+ l +s++++        lvhkl+tr+++Ll++k+pegr+++++L+k+ ++ +g+  l+ +++W+r+l
  KHJ33441.1   6 DLRVLCDQISSVPVVELPSLLPSLSQKILYCKGLVTSSTSQsdtpgvsvLVHKLKTRLTTLLNGKQPEGRFVAIVLIKAFIDIGGWDALKTSGPWVRGL 104
                 59*********************************9999999********************************************************* PP

        RIX1  92 lsiLekpdppavlelaistlsriftltrgkptltREiltpnlpkfitallqlleee............letvlealstllplhPttfRpfankirslll 178
                 lsiL kpdp +++el+i+tl++++ l++++p+l+REi+tp+lp+++t++l+l++              l+ +l++++tl+p++ ++ Rpf+++ir  + 
  KHJ33441.1 105 LSILGKPDPFISKELCIITLTKLYILIYNYPNLVREIATPTLPTYVTTCLNLISTVsskrvssvpstlLKAILHSFCTLIPRYASIYRPFSSQIRLHIG 203
                 ******************************************************76******************************************* PP

        RIX1 179 sllasses 186
                  lla+s+s
  KHJ33441.1 204 PLLAPSSS 211
                 ****9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (731 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       517  (0.028836); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.40
# Mc/sec: 5470.83
//
Query:       KHJ33442.1  [L=500]
Description: putative aldehyde dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.9e-181  602.6   0.1   4.4e-181  602.4   0.1    1.0  1  Aldedh    Aldehyde dehydrogenase family
  ------ inclusion threshold ------
      0.013   15.0   0.0       0.11   12.0   0.0    2.1  1  DUF1487   Protein of unknown function (DUF1487)


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  602.4   0.1  4.9e-185  4.4e-181       1     462 []      28     494 ..      28     494 .. 0.99

  Alignments for each domain:
  == domain 1  score: 602.4 bits;  conditional E-value: 4.9e-185
                 EET-SS.SEEEEEETTTCEEEEEEE-B-HHHHHHHHHHHHHHHH..HHTTS-HHHHHHHHHHHHHHHHHTHHHHHHHHHHHH---HHHHHHHHHHHHHH CS
      Aldedh   1 wveses.etievinPatgeviakvpaataedvdaavaaAkeafk..awaklpaeeRaeiLrkaadlleerkeelaeletletGkplaearaeveeaidv 96 
                 wv+s++ +ti +inP++++ i++v +a+a+dvd avaaA++af+  +w++lp++eR+++L  + dl++++++ la++et+++Gk++a+a+++v+++ +v
  KHJ33442.1  28 WVKSSDgQTITTINPTDESGITSVYSASAKDVDTAVAAARKAFQdpSWSDLPPTERGNLLISLSDLVKKHAHTLATIETWDNGKTIASASGDVKSVSEV 126
                 999999778**********************************9889**************************************************** PP

                 HHHHHHHHHHHSEEEEEECTTEEEEEEEEE-SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHTTS-TTSEEE--SSTCC CS
      Aldedh  97 lryyaelaeklegevlpssegklalvrrePlGvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeeaglPkgvlnvvtgsgse 195
                 lryy ++a+k++g+v+ + + +l+++ +eP+Gv+g+I+PWNfPll+aawkl pala+GNtvvlK ae+tpls+l+la+l++e+g+P+gv+n+++g+g+e
  KHJ33442.1 127 LRYYGGYADKIHGQVIDTGPARLSYTIKEPVGVCGQIIPWNFPLLMAAWKLGPALACGNTVVLKAAEQTPLSILYLANLIKEVGFPPGVVNILNGYGRE 225
                 ******************99******************************************************************************* PP

                 HHHHHHH-TTESEEEEES-HHHHHHHHHHHHCTTSEEEEEE---EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHH CS
      Aldedh 196 vgealvehpevdkvsftGstevgrkiakaaaknlkrvtlElGGknplivledaDldkaveaivkgafgnaGQvCiaasrllvqesiydefveklveaak 294
                 +g a+++h ++dk+ ftGst +g++i+k a++++k++tlE+GGk+pl++++da+l++av+++  g+++n+GQvC+a+sr+lvqesiyd f+  ++++++
  KHJ33442.1 226 AGVAIATHSGIDKIGFTGSTVTGKEIMKMASGTMKNITLETGGKSPLLIFDDANLEQAVKWAHIGIMYNQGQVCTATSRILVQESIYDSFLTLFKKRVQ 324
                 *************************************************************************************************** PP

                 T-.-BS-TTSTT-SB---SSHHHHHHHHHHHHHHHHTTSEEEE-TT..E.SB-SSSTTEE--EEEES-TTTSHHHHS---SSEEEEEEESSHHHHHHHH CS
      Aldedh 295 kl.kvgdpldedtdvGPliseaqlekvekyveeakeegaklllGge..reeaglekgyfvePtvlanvtpdmriaqeEiFGPVlsvikfkdeeeaieia 390
                 ++  vgdp+ e+t  GP++++aq+e+v +y++ +keega+l+ Gge   + +++ kg+f++Pt++++v+p+m+i++eE+FGP +++ +f++eeea++ia
  KHJ33442.1 325 EVsVVGDPFSESTFQGPQVTKAQYERVLSYIKCGKEEGATLVSGGEpfSQAKKDGKGFFITPTIFTDVKPSMKIFREEVFGPFVVINSFETEEEALKIA 423
                 *9889*****************************************998899999******************************************** PP

                 HSSSEESEEEEE-SBHHHHHHHHHHS-SSEEEESSSST--TTTSEB--CGGGEES-BSHHHHHHHTEEEEEE CS
      Aldedh 391 NdteyGLaagvftkdleraervaerleaGnvyiNdsttgaaealpfgGvkqSglGreggkegleeytevktv 462
                 Ndt yGL+++vftkd++ra+rva+++e G+v+iN+s++++ +  pfgGvkqSg+Gre g++gl  yt++k+v
  KHJ33442.1 424 NDTTYGLGSAVFTKDITRAHRVARKIESGMVWINSSNDSSFKV-PFGGVKQSGIGRELGEAGLAGYTQIKSV 494
                 ******************************************9.**************************97 PP

>> DUF1487  Protein of unknown function (DUF1487)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.2e-05      0.11       8     170 ..     272     460 ..     268     467 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.2e-05
     DUF1487   8 mvifedgDlnsale..alveslkePfaegavatvlveesirdefvervrsklkplseevaeHpsylkale..kidelkaktisa............... 87 
                 ++if+d+ l++a++  ++    ++   + a   +lv+esi d+f+ + +++++++s      p   ++ +  ++ + + +++                 
  KHJ33442.1 272 LLIFDDANLEQAVKwaHIGIMYNQGQVCTATSRILVQESIYDSFLTLFKKRVQEVSVV--GDPFSESTFQgpQVTKAQYERVLSyikcgkeegatlvsg 368
                 578999999999873233344456667888999****************999987643..222222222211333333333333344455555556677 PP

     DUF1487  88 .......ksesakakasPilVldvt..hsflgdkptg.vvTlhtFrnakEvvkllakeslkfasvsvwneklaavyelvarlnvdvftiNCak 170
                        k++ +    +P + +dv+   + + ++  g  v +  F + +E+ k+++  +  + s +v+ + ++ ++ ++ ++++ ++ iN  +
  KHJ33442.1 369 gepfsqaKKDGKGFFITPTIFTDVKpsMKIFREEVFGpFVVINSFETEEEALKIANDTTYGLGS-AVFTKDITRAHRVARKIESGMVWINSSN 460
                 9977665555556667999999997223457665444388999999999999999999998888.7899999999999999999999999766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 3856.95
//
Query:       KHJ33443.1  [L=334]
Description: putative splicing factor 3b subunit 4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-33  114.5   0.0    1.1e-15   57.2   0.1    2.2  2  RRM_1           RNA recognition motif. (a.k.a. RRM, RBD, or R
     0.0021   17.7   0.4       0.23   11.2   0.1    2.5  2  OB_RNB          Ribonuclease B OB domain
     0.0086   16.2   0.0      0.066   13.3   0.0    2.2  2  RRM_7           RNA recognition motif
     0.0094   15.5   0.0       0.14   11.8   0.0    2.2  2  RRM_5           RNA recognition motif. (a.k.a. RRM, RBD, or R
  ------ inclusion threshold ------
      0.053   13.6   0.0        2.2    8.4   0.0    2.3  2  Cas_Cas2CT1978  CRISPR-associated protein (Cas_Cas2CT1978)
       0.18   11.8   0.2        7.1    6.7   0.1    2.4  2  CMV_1a_C        Cucumber mosaic virus 1a protein C terminal


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.0   1.3e-18   3.7e-15       1      70 []      15      85 ..      15      85 .. 0.98
   2 !   57.2   0.1   3.7e-19   1.1e-15       1      69 [.     103     172 ..     103     173 .. 0.96

  Alignments for each domain:
  == domain 1  score: 55.5 bits;  conditional E-value: 1.3e-18
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70
                +++gn+ + vt++ + el+ + G+i+++ l++d  t++++g++fVeF s+edAe A + +n   l g++++
  KHJ33443.1 15 VYIGNIDERVTDSLIWELMLQAGRIVNVHLPKDrVTQTHQGYGFVEFISEEDAEYAARIMNQVRLFGKPIR 85
                8*************************************************************999999885 PP

  == domain 2  score: 57.2 bits;  conditional E-value: 3.7e-19
                 EEEESETTTSSHHHHHHHHHTTSCE.EEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpi.ksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 lf+gnL   v+e+ L++ Fs fG   +  k+ rde+g skg++fV +++ e+ ++A++++ng+ l+++ +
  KHJ33443.1 103 LFIGNLDAMVDEKALYDTFSRFGTLqSQPKIARDENGLSKGYGFVSYTNFEASDDAIANMNGQYLMNKDV 172
                 8************************7889*************************************9976 PP

>> OB_RNB  Ribonuclease B OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0     0.011        34       2      15 ..      48      61 ..      48      70 .. 0.80
   2 !   11.2   0.1   7.8e-05      0.23       7      53 ..     141     188 ..     138     192 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.011
                EEEE-SSS-EEEEE CS
      OB_RNB  2 tvrahkkGFGFlip 15
                +v+ + +G+GF++ 
  KHJ33443.1 48 RVTQTHQGYGFVEF 61
                588899******85 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 7.8e-05
                 SSS-EEEEECT..TEEEEE-HHHHTTS-TT-EEEEEEEE.SSSEEEEEE CS
      OB_RNB   7 kkGFGFlipde.gkeDifippeqmkkamhGDrVlvritk.gdrrgrreg 53 
                 +kG+GF++    + +D  i + + ++ m++D V v+    +d +g+r g
  KHJ33443.1 141 SKGYGFVSYTNfEASDDAIANMNGQYLMNKD-VSVQYAYkKDGKGERHG 188
                 79*******99********************.66766665777777766 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0       0.3     9e+02       4      57 ..      15      61 ..      13      77 .. 0.60
   2 !   13.3   0.0   2.2e-05     0.066       4      59 ..     103     151 ..     100     175 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.3
       RRM_7  4 vFvGGlPiDiteeelkatfkefgk.vlvdwPkkaeskkkaaenskaakgyvflvf 57
                v++G +   +t++ +++ + + g+ v v  Pk   +        ++++gy f+ f
  KHJ33443.1 15 VYIGNIDERVTDSLIWELMLQAGRiVNVHLPKDRVT--------QTHQGYGFVEF 61
                667777777777777776666665234666654322........33345555544 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 2.2e-05
       RRM_7   4 vFvGGlPiDiteeelkatfkefgkvlvdwPkkaeskkkaaenskaakgyvflvfed 59 
                 +F+G l + ++e++l++tf++fg+++   Pk a+ ++  +      kgy f+ +++
  KHJ33443.1 103 LFIGNLDAMVDEKALYDTFSRFGTLQS-QPKIARDENGLS------KGYGFVSYTN 151
                 7**********************9975.477666654443......5777777765 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   4.6e-05      0.14      59      98 ..      49      88 ..       9     123 .. 0.79
   2 ?    1.9   0.0     0.052   1.5e+02      64      98 ..     142     176 ..      87     183 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.6e-05
       RRM_5 59 flktkketalvqmgdasaveravqHLnnaklfgkrleval 98
                + +t +++ +v+  ++ ++e a   +n ++lfgk+++v  
  KHJ33443.1 49 VTQTHQGYGFVEFISEEDAEYAARIMNQVRLFGKPIRVNK 88
                567899****************************999863 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.052
       RRM_5  64 ketalvqmgdasaveravqHLnnaklfgkrleval 98 
                 k++ +v   +  a + a+  +n++ l +k + v+ 
  KHJ33443.1 142 KGYGFVSYTNFEASDDAIANMNGQYLMNKDVSVQY 176
                 6788999999999999*******999999887765 PP

>> Cas_Cas2CT1978  CRISPR-associated protein (Cas_Cas2CT1978)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0   0.00075       2.2      24      48 ..      11      36 ..       5      62 .. 0.70
   2 ?    2.9   0.0     0.039   1.2e+02      22      43 ..      97     118 ..      93     151 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00075
                    EETTEEEEEE-HHHHHHH.HHHHHHH CS
  Cas_Cas2CT1978 24 vragVyvgrvsarVrekl.werveek 48
                     +a Vy+g++ +rV ++l we + ++
      KHJ33443.1 11 KEATVYIGNIDERVTDSLiWELMLQA 36
                    5799***********98626655544 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.039
                     EEEETTEEEEEE-HHHHHHHHH CS
  Cas_Cas2CT1978  22 lEvragVyvgrvsarVreklwe 43 
                     +Ev a +++g++ a+V ek + 
      KHJ33443.1  97 VEVGAELFIGNLDAMVDEKALY 118
                     79**************998665 PP

>> CMV_1a_C  Cucumber mosaic virus 1a protein C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.049   1.5e+02      16      37 ..      25      46 ..      17      58 .. 0.82
   2 ?    6.7   0.1    0.0024       7.1      33      64 ..     159     190 ..     139     196 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.049
    CMV_1a_C 16 ankevletyrrvddlvnvhlad 37
                ++  ++e + +   +vnvhl +
  KHJ33443.1 25 TDSLIWELMLQAGRIVNVHLPK 46
                4567999************975 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0024
    CMV_1a_C  33 vhladGrWlvPedfeysvGynerGlGpkrdde 64 
                 +   +G++l+ +d+  +  y + G G+++ de
  KHJ33443.1 159 IANMNGQYLMNKDVSVQYAYKKDGKGERHGDE 190
                 45679************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       513  (0.0286129); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2491.37
//
Query:       KHJ33444.1  [L=332]
Description: putative duf410 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-84  282.8   0.0    3.6e-84  282.6   0.0    1.1  1  DUF410    Protein of unknown function (DUF410)


Domain annotation for each model (and alignments):
>> DUF410  Protein of unknown function (DUF410)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  282.6   0.0     2e-88   3.6e-84       1     255 []      38     301 ..      38     301 .. 0.98

  Alignments for each domain:
  == domain 1  score: 282.6 bits;  conditional E-value: 2e-88
      DUF410   1 qkkydeAidllyqgalellkakqygsgaDLalllvevyekaevevdeeskdrliellskfpaeeperkkfikaaikwSakkgekkaGdpeLhhllakll 99 
                 +k++++Aid+l+++a++ll+ak++gsg+DL+l+l+evy +ae+++d+++k++l++ll++f+++ep+rkkf+ a+i wS k+g+ +aGdpeLhh++++ +
  KHJ33444.1  38 SKDWNSAIDILFNVAKSLLEAKKGGSGGDLCLMLIEVYIQAELSPDSDNKAKLVTLLHLFDSDEPTRKKFVGAMIGWSVKFGPFPAGDPELHHIVGSIY 136
                 5899*********************************************************************************************** PP

      DUF410 100 lkegeleeAerhlllgtddsaeelakllvewaeegeeseadlfiaRavLqylllgnvkaAnklldeflkkleskessll.......te..rvfp.lpll 188
                 + e +++eAerhl lgt+ds+e lakl ++w++ +e+++a+ ++aRav++yll+gn+++A ++l+ fl++l++ ++s         ++  ++fp  pll
  KHJ33444.1 137 ADELDVYEAERHLTLGTKDSPEILAKLEYKWYSDNESHTAAQYAARAVFPYLLAGNIRDADRSLQVFLSNLTTTNKSVPvqsissnNAdvQIFPsIPLL 235
                 ***************************************************************************9766999997622689******** PP

      DUF410 189 nFlqlllltiqrkskelFkkLkekYkpslkrdpslkeylekIgelyFgikpprqqsnglqdmmssLl 255
                 nFl+ll+l+iq+ +++ F++L+++Y  ++k+   +++ l+++gelyFgi++prq +n+l+d++++++
  KHJ33444.1 236 NFLSLLILVIQKSNPNIFRQLVDRYLIQIKELRIWDDTLTRLGELYFGIERPRQ-GNPLMDILGGFF 301
                 *****************************************************9.9*********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       583  (0.0325172); expected 358.6 (0.02)
Passed bias filter:                      555  (0.0309554); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 2551.65
//
Query:       KHJ33445.1  [L=569]
Description: putative autophagy related lipase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-06   26.4   0.0    1.1e-05   25.3   0.0    1.5  1  Lipase_3  Lipase (class 3)


Domain annotation for each model (and alignments):
>> Lipase_3  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   6.3e-10   1.1e-05      48      84 ..     290     327 ..     254     332 .. 0.73

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 6.3e-10
                 HHHHHHHHHH.HHHHTT-EEEEEEEETHHHHHHHHHHH CS
    Lipase_3  48 reqvlkelkr.llekypeysivvtGHSLGgalAlLaal 84 
                 ++   + l + + + yp+ si++tGHSLGg++ ++++l
  KHJ33445.1 290 YYVAGRHLYKnITSLYPNSSIWFTGHSLGGSIGSMIGL 327
                 444444554449999*****************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.38
# Mc/sec: 4479.16
//
Query:       KHJ33446.1  [L=608]
Description: putative transcriptional repressor rco-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-59  195.8  11.8      1e-08   35.7   0.1    7.4  7  WD40            WD domain, G-beta repeat
    1.7e-17   63.5   6.2    3.4e-17   62.5   6.2    1.5  1  Tup_N           Tup N-terminal
    5.6e-16   58.6   0.0     0.0048   17.2   0.0    5.9  5  ANAPC4_WD40     Anaphase-promoting complex subunit 4 WD40 dom
    2.7e-06   26.9   0.0       0.11   11.8   0.0    4.7  6  WD40_like       WD40-like domain
    4.2e-06   25.9   0.1       0.81    8.6   0.0    5.4  6  Ge1_WD40        WD40 region of Ge1, enhancer of mRNA-decappin
     0.0038   15.9   0.1       0.64    8.6   0.0    2.8  3  Nup160          Nucleoporin Nup120/160
     0.0056   15.3   0.3       0.13   10.8   0.1    2.5  2  Cytochrom_D1    Cytochrome D1 heme domain
  ------ inclusion threshold ------
      0.037   14.5   0.5      0.071   13.5   0.5    1.4  1  DUF3037         Protein of unknown function (DUF3037)
      0.045   13.2   0.9      0.068   12.6   0.9    1.1  1  Golgin_A5       Golgin subfamily A member 5
      0.075   12.3   0.0         19    4.4   0.0    3.0  3  Nbas_N          Neuroblastoma-amplified sequence, N terminal
      0.081   12.9   0.2         22    5.2   0.0    4.1  5  PD40            WD40-like Beta Propeller Repeat
       0.22    9.8   0.0       0.32    9.2   0.0    1.1  1  Gp58            gp58-like protein


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0     3e-07   0.00045       3      38 .]     295     329 ..     293     329 .. 0.87
   2 !   29.0   0.0   8.6e-10   1.3e-06      13      38 .]     352     377 ..     340     377 .. 0.92
   3 !   35.7   0.1   6.8e-12     1e-08       5      38 .]     385     419 ..     381     419 .. 0.94
   4 !   27.2   0.1   3.3e-09   4.9e-06      12      38 .]     426     460 ..     421     460 .. 0.81
   5 !   29.6   0.0   5.8e-10   8.7e-07       8      37 ..     474     504 ..     468     505 .. 0.92
   6 !   35.5   0.1   7.8e-12   1.2e-08       1      38 []     521     559 ..     521     559 .. 0.94
   7 !   19.5   0.0   8.7e-07    0.0013       5      38 .]     567     601 ..     563     601 .. 0.90

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 3e-07
                 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 +++tl  H s v++++fs dg+++a+G+ +++  i+d
  KHJ33446.1 295 LVHTL-QHESvVCCVRFSFDGKYVATGC-NRSAQIYD 329
                 68898.595647****************.**999998 PP

  == domain 2  score: 29.0 bits;  conditional E-value: 8.6e-10
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 ++s++fspdg++la+G +D+ +r+Wd
  KHJ33446.1 352 IRSVCFSPDGRYLATGAEDKLIRVWD 377
                 89***********************9 PP

  == domain 3  score: 35.7 bits;  conditional E-value: 6.8e-12
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  t++GH ++++sl+f +dg+ +asGs D+tvr+Wd
  KHJ33446.1 385 NTFSGHeQDIYSLDFARDGRTIASGSGDRTVRLWD 419
                 589***999****************99*******9 PP

  == domain 4  score: 27.2 bits;  conditional E-value: 3.3e-09
                 S........EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 s........vtslafspdgawlasGsdDgtvriWd 38 
                          vt +a spd +++a+Gs D++vr+Wd
  KHJ33446.1 426 IltlsiedgVTTVAISPDTKFVAAGSLDKSVRVWD 460
                 3444445559************************9 PP

  == domain 5  score: 29.6 bits;  conditional E-value: 5.8e-10
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +GH +sv+s+afsp+g+ l+sGs D+t+++W
  KHJ33446.1 474 DGHkDSVYSVAFSPNGKDLVSGSLDKTIKMW 504
                 6**777************************* PP

  == domain 6  score: 35.5 bits;  conditional E-value: 7.8e-12
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g+c++t++GH ++v s+a  pdg+w++sGs+D+ v +Wd
  KHJ33446.1 521 GRCIKTFEGHkDFVLSVALTPDGNWMLSGSKDRGVQFWD 559
                 68********666*************************9 PP

  == domain 7  score: 19.5 bits;  conditional E-value: 8.7e-07
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                   l GH +sv s+a sp+g  +a+Gs D   riW+
  KHJ33446.1 567 LMLQGHkNSVISVAPSPSGGSFATGSGDMRARIWS 601
                 5689**99999**************99*******5 PP

>> Tup_N  Tup N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.5   6.2   2.2e-20   3.4e-17       1      76 [.      18      86 ..      18      87 .. 0.96

  Alignments for each domain:
  == domain 1  score: 62.5 bits;  conditional E-value: 2.2e-20
       Tup_N  1 RlnelLdavkqEfdalsqeasslkaqkdeyelkiqsqiqElqqirqtlyeLeeahrkikqqYEeeiarLkaeLesr 76
                RlnelL+ +k+Ef++ ++          eye+++++qiqE++++r+++y +e++h ++kq+Y+ee++rL++eLe+r
  KHJ33446.1 18 RLNELLEGIKAEFETQAR-------TSGEYEHSMAQQIQEMHAVREKVYAMEQTHLALKQKYDEELSRLHRELEAR 86
                9*************9887.......678**********************************************98 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0073        11      29      78 ..     296     341 ..     277     351 .. 0.78
   2 !   17.0   0.0   3.7e-06    0.0055      34      81 ..     345     392 ..     333     394 .. 0.86
   3 !   17.2   0.0   3.2e-06    0.0048      37      85 ..     390     436 ..     386     440 .. 0.89
   4 !    9.6   0.0   0.00074       1.1       5      66 ..     442     505 ..     438     510 .. 0.79
   5 ?    2.1   0.0      0.16   2.4e+02      36      81 ..     529     574 ..     519     589 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0073
  ANAPC4_WD40  29 vwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                  v t    +++s v +++++ dgk  a +++  + +++d+ +g+ +  l+ 
   KHJ33446.1 296 VHT---LQHESVVCCVRFSFDGKYVATGCNR-SAQIYDIVTGQKICVLQD 341
                  333...47889999***************76.579****99998876655 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 3.7e-06
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  e+  d  +rs++++pdg+ La + +d  +r+ d+ s  + +++s +++
   KHJ33446.1 345 ETVGDLYIRSVCFSPDGRYLATGAEDKLIRVWDIASRSIRNTFSGHEQ 392
                  4567889********************************999987765 PP

  == domain 3  score: 17.2 bits;  conditional E-value: 3.2e-06
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavt 85 
                  +++ + sL +  dg+ +a +  d +vrl d+e+g+ + +ls+++   vt
   KHJ33446.1 390 HEQDIYSLDFARDGRTIASGSGDRTVRLWDIETGHNILTLSIEDG--VT 436
                  678999*******************************99999887..55 PP

  == domain 4  score: 9.6 bits;  conditional E-value: 0.00074
  ANAPC4_WD40   5 ptmDLiAlatedgellvfRlngqrvwtl..eedkedsevrsLaWkpdgklLavaysdgevrlld 66 
                  p    +A ++ d++++v  +n   +++     d+++ +v s+a++p+gk L+ +  d ++++ +
   KHJ33446.1 442 PDTKFVAAGSLDKSVRVWDTNSGYLVERleGPDGHKDSVYSVAFSPNGKDLVSGSLDKTIKMWE 505
                  556666777777777777777666666688889999*******************999999865 PP

  == domain 5  score: 2.1 bits;  conditional E-value: 0.16
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  +++  v s+a  pdg+ +  + +d  v++ d  sg +   l+ +++
   KHJ33446.1 529 GHKDFVLSVALTPDGNWMLSGSKDRGVQFWDPRSGITQLMLQGHKN 574
                  5667789999*******************99999977766666665 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       2.6   3.8e+03     122     146 ..      46      70 ..      42      88 .. 0.70
   2 ?    0.1   0.0      0.26   3.9e+02       5      39 ..     307     340 ..     303     345 .. 0.84
   3 ?   -0.6   0.0      0.45   6.8e+02       4      33 ..     353     382 ..     350     390 .. 0.85
   4 !   11.8   0.0   7.3e-05      0.11       2      36 ..     393     427 ..     392     436 .. 0.89
   5 !    6.0   0.0    0.0043       6.4       4      66 ..     436     502 ..     433     508 .. 0.81
   6 ?    0.8   0.0      0.16   2.4e+02       4      47 ..     535     578 ..     533     580 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.6
   WD40_like 122 seIkeikiennkiysLsesafivfd 146
                  +I+e++  ++k+y++ ++++   +
  KHJ33446.1  46 QQIQEMHAVREKVYAMEQTHLALKQ 70 
                 57999999999***99999986533 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.26
   WD40_like   5 sidiskkgslilyGgkddkctvlkleslesvsive 39 
                  + +s++g++++ G ++  ++++++ +++++ +++
  KHJ33446.1 307 CVRFSFDGKYVATGCNR-SAQIYDIVTGQKICVLQ 340
                 5789*********9987.58999999999988765 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.45
   WD40_like   4 YsidiskkgslilyGgkddkctvlklesle 33 
                  s+ +s++g +++ G++d+ ++v ++ s  
  KHJ33446.1 353 RSVCFSPDGRYLATGAEDKLIRVWDIASRS 382
                 58889******************9998865 PP

  == domain 4  score: 11.8 bits;  conditional E-value: 7.3e-05
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlkleslesvs 36 
                 +iYs+d+ ++g  i+ G+ d ++++ ++e+++ + 
  KHJ33446.1 393 DIYSLDFARDGRTIASGSGDRTVRLWDIETGHNIL 427
                 7*****************************99875 PP

  == domain 5  score: 6.0 bits;  conditional E-value: 0.0043
   WD40_like   4 YsidiskkgslilyGgkddkctvlkleslesvsive...sfedSvifvklldddlilv.vtlDGtil 66 
                  ++ is++ ++++ G+ d+ ++v +++s+ +v  +e   + +dSv  v +  + + lv ++lD ti 
  KHJ33446.1 436 TTVAISPDTKFVAAGSLDKSVRVWDTNSGYLVERLEgpdGHKDSVYSVAFSPNGKDLVsGSLDKTIK 502
                 57999*************************999886232699***9999998876555268888885 PP

  == domain 6  score: 0.8 bits;  conditional E-value: 0.16
   WD40_like   4 YsidiskkgslilyGgkddkctvlkleslesvsivesfedSvif 47 
                  s+ + ++g+ +l G+kd  ++  + +s+++  ++++ ++Svi 
  KHJ33446.1 535 LSVALTPDGNWMLSGSKDRGVQFWDPRSGITQLMLQGHKNSVIS 578
                 5889999***********************************95 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0       0.1   1.5e+02     183     207 ..     298     322 ..     287     337 .. 0.82
   2 !    8.6   0.0   0.00054      0.81     186     218 ..     348     380 ..     326     392 .. 0.81
   3 ?    2.3   0.0     0.044        65     189     217 ..     393     421 ..     385     426 .. 0.84
   4 ?    2.1   0.0     0.053        79     185     216 ..     430     461 ..     421     469 .. 0.83
   5 ?    3.1   0.0     0.026        38     189     233 ..     479     530 ..     469     542 .. 0.72
   6 ?    0.1   0.0      0.21   3.1e+02     185     215 ..     528     559 ..     514     574 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.1
    Ge1_WD40 183 kieehsliveaafspdGtalatase 207
                  ++++s + +  fs dG  +at ++
  KHJ33446.1 298 TLQHESVVCCVRFSFDGKYVATGCN 322
                 45677899999***********997 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00054
    Ge1_WD40 186 ehsliveaafspdGtalatasedGevkffqvyl 218
                  +  i +  fspdG  lat +ed +++ + +  
  KHJ33446.1 348 GDLYIRSVCFSPDGRYLATGAEDKLIRVWDIAS 380
                 455688899********************9975 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.044
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqvy 217
                  i +  f+ dG ++a  s d +v+++ + 
  KHJ33446.1 393 DIYSLDFARDGRTIASGSGDRTVRLWDIE 421
                 57777899******************985 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.053
    Ge1_WD40 185 eehsliveaafspdGtalatasedGevkffqv 216
                 + +  +++ a+spd   +a+ s d  v+ +  
  KHJ33446.1 430 SIEDGVTTVAISPDTKFVAAGSLDKSVRVWDT 461
                 445568999*******************9975 PP

  == domain 5  score: 3.1 bits;  conditional E-value: 0.026
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqvylede.......eeprCLheWkPh 233
                  + + afsp+G  l   s d ++k++ +            +  rC+  +  h
  KHJ33446.1 479 SVYSVAFSPNGKDLVSGSLDKTIKMWELVAPRGghpnnvpKGGRCIKTFEGH 530
                 678899********************98764322333344444566555555 PP

  == domain 6  score: 0.1 bits;  conditional E-value: 0.21
    Ge1_WD40 185 eehs.liveaafspdGtalatasedGevkffq 215
                 e h   + + a++pdG  +   s+d  v+f+ 
  KHJ33446.1 528 EGHKdFVLSVALTPDGNWMLSGSKDRGVQFWD 559
                 55544688999*******************95 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.43   6.5e+02     229     254 ..     360     385 ..     346     396 .. 0.81
   2 !    4.2   0.0    0.0092        14     229     258 ..     402     431 ..     379     437 .. 0.82
   3 !    8.6   0.0   0.00043      0.64     222     254 ..     437     468 ..     427     480 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.43
                 TTTEEEEEETT-EEEEEETTTTEEEE CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkcla 254
                 +  yl++   d+ +rvW++++ ++  
  KHJ33446.1 360 DGRYLATGAEDKLIRVWDIASRSIRN 385
                 5678888899*********9988755 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0092
                 TTTEEEEEETT-EEEEEETTTTEEEEEEE- CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclatidl 258
                 +  ++++ s d+++r+W+++tg  + t ++
  KHJ33446.1 402 DGRTIASGSGDRTVRLWDIETGHNILTLSI 431
                 5567888899***********998887655 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.00043
                 ET.........TTTEEEEEETT-EEEEEETTTTEEEE CS
      Nup160 222 avavvei....gqtylfalsrdgkLrvWnlltgkcla 254
                 +     +    + ++++a s+d+ +rvW++++g +++
  KHJ33446.1 437 T-----VaispDTKFVAAGSLDKSVRVWDTNSGYLVE 468
                 3.....333459******************9987775 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.1   8.7e-05      0.13      29      94 ..     342     409 ..     321     411 .. 0.77
   2 !    6.5   0.1    0.0017       2.6      15      95 ..     371     451 ..     366     469 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 8.7e-05
                   EEEE-STTEEE.EEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SS..EEEEEEE--TTSEEEEE CS
  Cytochrom_D1  29 avletgyalHi.srvfasdgRyvyvigRDgkvtliDLwakeivaevkiGl..narsvavSqddryvivg 94 
                   +++et ++l i s+ f++dgRy+ + + D  + + D+  + i ++   G   +  s++ + d+r ++ g
    KHJ33446.1 342 ETVETVGDLYIrSVCFSPDGRYLATGAEDKLIRVWDIASRSIRNTF-SGHeqDIYSLDFARDGRTIASG 409
                   5799*****664999*********************9887766554.4541145688888999988877 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0017
                   TEEEEEETTT-SEEEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEEEEEEE--TTSEEEEEE CS
  Cytochrom_D1  15 gkvalldgdskeilavletgyalHisrvfasdgRyvyvigRDgkvtliDLwakeivaevkiGlnarsvavSqddryvivgn 95 
                     +++ d  s +i +++ ++ +   s  fa+dgR +   + D +v l D+ + + + ++ i      va+S d ++v++g+
    KHJ33446.1 371 KLIRVWDIASRSIRNTFSGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIETGHNILTLSIEDGVTTVAISPDTKFVAAGS 451
                   557777778888888888888778899*************************998888888888889************97 PP

>> DUF3037  Protein of unknown function (DUF3037)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.5   4.8e-05     0.071      52     116 ..      18      82 ..      12      83 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 4.8e-05
     DUF3037  52 aleeelkaleeicegekaagpiakldlaerfrwltaprstviqtsevhtgltedpeaelerLfee 116
                  l+e l+ +++  e +++ + + ++++a+ ++++ a r+ v  + ++h +l+++ ++el rL +e
  KHJ33446.1  18 RLNELLEGIKAEFETQARTSGEYEHSMAQQIQEMHAVREKVYAMEQTHLALKQKYDEELSRLHRE 82 
                 577888888888888888778889**************************************987 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.9   4.5e-05     0.068      90     158 ..      18      86 ..      13      93 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.5e-05
   Golgin_A5  90 slreqlqeleeqleeerkakeeveaelerlkeelryleeelvrskatlqsrikdrekeieklrnqlttk 158
                  l+e l+ ++ ++e++ +++ e+e+ ++++ +e+++++e ++   +t  +  ++ ++e+++l+++l  +
  KHJ33446.1  18 RLNELLEGIKAEFETQARTSGEYEHSMAQQIQEMHAVREKVYAMEQTHLALKQKYDEELSRLHRELEAR 86 
                 5678899999********************************9999998888999*********99865 PP

>> Nbas_N  Neuroblastoma-amplified sequence, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.013        19     235     275 ..     355     395 ..     337     399 .. 0.89
   2 ?    3.3   0.0     0.028        42     229     260 ..     432     463 ..     426     471 .. 0.92
   3 ?   -0.1   0.0       0.3   4.5e+02     227     258 ..     475     506 ..     465     511 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.013
      Nbas_N 235 mslspdgtllavihfsgklsiwdipslkqrgeweqeeqpgy 275
                 + +spdg  la+      + +wdi s   r +++ +eq  y
  KHJ33446.1 355 VCFSPDGRYLATGAEDKLIRVWDIASRSIRNTFSGHEQDIY 395
                 678*********9999999*************999999766 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.028
      Nbas_N 229 kdgvfkmslspdgtllavihfsgklsiwdips 260
                 +dgv  +++spd   +a+  +  ++ +wd  s
  KHJ33446.1 432 EDGVTTVAISPDTKFVAAGSLDKSVRVWDTNS 463
                 7***************************9876 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.3
      Nbas_N 227 eekdgvfkmslspdgtllavihfsgklsiwdi 258
                   kd v+ +++sp+g  l    +   + +w++
  KHJ33446.1 475 GHKDSVYSVAFSPNGKDLVSGSLDKTIKMWEL 506
                 679***************99999999999986 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.015        22      16      24 ..     357     365 ..     353     365 .. 0.94
   2 ?   -3.3   0.0       6.5   9.7e+03      19      24 ..     402     407 ..     399     407 .. 0.84
   3 ?   -3.2   0.0         6     9e+03      15      21 ..     439     445 ..     436     447 .. 0.78
   4 ?    0.4   0.0      0.44   6.6e+02      15      21 ..     484     490 ..     481     493 .. 0.85
   5 ?    1.0   0.0      0.29   4.3e+02      15      23 ..     538     546 ..     536     547 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.015
                 E-TTSSEEE CS
        PD40  16 fSPDGkrla 24 
                 fSPDG++la
  KHJ33446.1 357 FSPDGRYLA 365
                 9******97 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 6.5
                 TSSEEE CS
        PD40  19 DGkrla 24 
                 DG+++a
  KHJ33446.1 402 DGRTIA 407
                 9***97 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 6
                 EE-TTSS CS
        PD40  15 sfSPDGk 21 
                 ++SPD k
  KHJ33446.1 439 AISPDTK 445
                 89***76 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.44
                 EE-TTSS CS
        PD40  15 sfSPDGk 21 
                 +fSP+Gk
  KHJ33446.1 484 AFSPNGK 490
                 8*****8 PP

  == domain 5  score: 1.0 bits;  conditional E-value: 0.29
                 EE-TTSSEE CS
        PD40  15 sfSPDGkrl 23 
                 +++PDG+++
  KHJ33446.1 538 ALTPDGNWM 546
                 689*****8 PP

>> Gp58  gp58-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0   0.00022      0.32     144     211 ..      15      80 ..       7      87 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00022
        Gp58 144 klalinetieGirreyqdadrelsssyqagieGlkatlasdklglkaeiqasaqgLsqkyddeirkLs 211
                   a +ne +eGi+ e++    + s +y+ ++    +++++ +  + a ++++   L+qkyd+e+++L+
  KHJ33446.1  15 ANARLNELLEGIKAEFET-QARTSGEYEHSMAQQIQEMHAVREKVYA-MEQTHLALKQKYDEELSRLH 80 
                 56899**********976.566899******9999999998866665.788999***********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (608 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       734  (0.0409393); expected 358.6 (0.02)
Passed bias filter:                      587  (0.0327403); expected 358.6 (0.02)
Passed Vit filter:                        81  (0.00451782); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.74u 0.24s 00:00:00.98 Elapsed: 00:00:00.41
# Mc/sec: 4406.61
//
Query:       KHJ33447.1  [L=549]
Description: putative transcription factor bzip [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0055   16.7   0.8       0.01   15.8   0.8    1.4  1  EMP24_GP25L      emp24/gp25L/p24 family/GOLD
  ------ inclusion threshold ------
      0.022   14.9   1.2      0.053   13.7   1.2    1.6  1  FlaG             FlaG protein
      0.024   14.7  14.8      0.024   14.7  14.8    2.0  2  bZIP_2           Basic region leucine zipper
      0.042   14.2   1.2       0.11   12.8   1.2    1.7  1  TSC22            TSC-22/dip/bun family
       0.18   10.6   0.6       0.26   10.2   0.6    1.2  1  LMBR1            LMBR1-like membrane protein
       0.19   11.6   2.9       0.35   10.8   2.9    1.4  1  Prefoldin        Prefoldin subunit
       0.29   11.1   5.2       0.57   10.2   5.2    1.4  1  Prefoldin_2      Prefoldin subunit
       0.32   10.8   3.7       0.33   10.8   2.0    1.9  1  DivIC            Septum formation initiator
       0.36   10.9  21.5      0.085   13.0   7.0    2.7  2  G_path_suppress  G-protein pathway suppressor
       0.58   10.3  16.1        1.7    8.8  16.1    1.7  1  bZIP_1           bZIP transcription factor
        8.3    5.8   8.2         52    3.2   8.2    2.0  1  PIEZO            Piezo


Domain annotation for each model (and alignments):
>> EMP24_GP25L  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.8   6.1e-06      0.01      97     151 ..     374     425 ..     323     431 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 6.1e-06
  EMP24_GP25L  97 vgseasdykdsakkekletleselkkleekldsikreqkylrereerlrdtnest 151
                  +++   ++k+   +  +e+l+s++k le++++++k+e +++r   +rlrd++  t
   KHJ33447.1 374 QRR---KEKEKEANLAIEKLQSQVKDLEKNMEKLKTERNFYRSERDRLRDIMLRT 425
                  322...244455577899********************************87655 PP

>> FlaG  FlaG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   1.2   3.2e-05     0.053      11      58 ..     367     414 ..     357     436 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 3.2e-05
                 HHHHHS-----SS-------HHHHHHHHHHHHHHHTTSS--EEEEEEE CS
        FlaG  11 kqqkseeekaekaeeekevseeeleeaveklnkklsslnteleFsvde 58 
                   ++   ++++++e+e+++  e+l++ v++l+k++++l+te +F   e
  KHJ33447.1 367 GASARFRQRRKEKEKEANLAIEKLQSQVKDLEKNMEKLKTERNFYRSE 414
                 44555567778888888889999*********************8776 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7  14.8   1.4e-05     0.024       6      54 .]     359     407 ..     355     407 .. 0.96
   2 ?   -1.8   0.9         2   3.3e+03       2      12 ..     468     478 ..     467     478 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.4e-05
                 XXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2   6 rerRrkNreAarrsRekkkakeeeleervkeLeeeNaqLrqkveqLeke 54 
                 +e+R +N  A++r+R+++k+ke+e    +++L+++   L+++ e+L++e
  KHJ33447.1 359 NEKRARNAGASARFRQRRKEKEKEANLAIEKLQSQVKDLEKNMEKLKTE 407
                 78999******************************************98 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2
                 XXXXXXXXXXX CS
      bZIP_2   2 ddeyrerRrkN 12 
                 ++e++ +Rr+N
  KHJ33447.1 468 SEEDESKRRGN 478
                 899******98 PP

>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.2   6.9e-05      0.11      16      42 ..     387     413 ..     384     420 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6.9e-05
       TSC22  16 VevLkekIkeLeernseleeENslLka 42 
                 +e L++++k+Le+++++l++E +++++
  KHJ33447.1 387 IEKLQSQVKDLEKNMEKLKTERNFYRS 413
                 799**********************97 PP

>> LMBR1  LMBR1-like membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.6   0.00016      0.26     174     265 ..     335     455 ..     333     545 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00016
       LMBR1 174 llilllGyGlvelPrslwr.................eiksdldeelkklyfeaaklntekeeaereledllkevkklrksisesdplrkyleeilkkvP 255
                 +l++ +  Gl  +P ++ +                 +++++++e+ k +++ ++kl+++ ++ e+++e       kl+++ ++    r+ l +i+  +P
  KHJ33447.1 335 VLTITTNQGLYTIPVDVHHasrlanekrarnagasaRFRQRRKEKEKEANLAIEKLQSQVKDLEKNME-------KLKTERNFYRSERDRLRDIMLRTP 426
                 57899999*********999999999999999999988888888888898999999955555555555.......555555555555666677777666 PP

       LMBR1 256 eeiaeklks...................n 265
                 e+    +++                   +
  KHJ33447.1 427 ETRYVAMQTpqsppqiprsfpdqletfsG 455
                 65555555455555544433333322431 PP

>> Prefoldin  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.9   0.00022      0.35      72     114 ..     380     422 ..     379     425 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00022
                 EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Prefoldin  72 eksleeAiellkkkleelekqlekleeeleklkdqittleanl 114
                 ek+++ Aie l+ ++++lek++ekl+ e ++ +++ + l++++
  KHJ33447.1 380 EKEANLAIEKLQSQVKDLEKNMEKLKTERNFYRSERDRLRDIM 422
                 788999***************************9999998876 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   5.2   0.00035      0.57      66      98 ..     375     407 ..     370     410 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00035
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2  66 eLeerketlekeiktlekqleklekeleelkee 98 
                  + +e++++++  i++l++q ++lek++e+lk+e
   KHJ33447.1 375 RRKEKEKEANLAIEKLQSQVKDLEKNMEKLKTE 407
                  56899999***********************97 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.0    0.0002      0.33      18      52 ..     386     420 ..     381     432 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.0002
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XX CS
       DivIC  18 aykqlkqeiaalqaelaklkaeneeLeaevkdLks 52 
                 a+ +l++++++l+++++klk e++   +e ++L++
  KHJ33447.1 386 AIEKLQSQVKDLEKNMEKLKTERNFYRSERDRLRD 420
                 78899***************************974 PP

>> G_path_suppress  G-protein pathway suppressor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   6.5     0.059        96      96     253 ..      98     281 ..      90     324 .. 0.54
   2 ?   13.0   7.0   5.2e-05     0.085      34      74 ..     368     408 ..     355     410 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.059
  G_path_suppress  96 KEqselaalqqaaa...q...........................vflpqvqqrqkllsmqgsphhqqrlqk................pgpqvn 143
                       E+sel++++q ++   +                           +             m+          +                +++  +
       KHJ33447.1  98 NESSELMIINQNPNlklNacsprifsgrqslisststtdsnsgslL------------WMT----------RpmltpkspsraihisrATTSGT 169
                      5666777776666643323334433334433333322222222221............111..........02222222222233333444444 PP

  G_path_suppress 144 vlkrkrspsppqltqayykqpalspgyaeksqqksdegraearvstnkslaqYppsgqlfyptvaphqklpppqtssqadarl..qtiY..qlq 233
                       +  + sp   +++q++ ++p+ +++   + +   + +  + + +t++ + +Yp+s  +  p++++ q l++   s+ ++ ++   ++Y  ++ 
       KHJ33447.1 170 LDAEESSPFMGSSKQIHTSEPSSTASLESSLN--ASSSISGQQNPTQRLSKNYPKSNHGGIPGSLNLQSLSNAPLSKIPSPSTstTSSYnpPTS 261
                      44444444444444455555554433333333..222223346778888889999999988888887777766667666555444788866666 PP

  G_path_suppress 234 sslalplrkqlevanqpspl 253
                      +++ ++l +q   a+++ p+
       KHJ33447.1 262 QNSPVSLIHQGGKASPSNPY 281
                      67777776665555555554 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 5.2e-05
  G_path_suppress  34 eeerlrrErEerkkedvmtLeetkeqIlklekkLaeLkeeK 74 
                      +  r r+ r e++ke ++++e  + q++ lek++++Lk e+
       KHJ33447.1 368 ASARFRQRRKEKEKEANLAIEKLQSQVKDLEKNMEKLKTER 408
                      6789**********************************996 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8  16.1     0.001       1.7       9      61 ..     361     420 ..     355     422 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.001
                 XX--HHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   9 rkqkNReaArrsRqRKqae.......ieeLerrvkaLekeNksLkseleelkkevekLks 61 
                 ++++N  a +r+RqR++++       ie+L+++vk Lek +++Lk e + ++ e++ L++
  KHJ33447.1 361 KRARNAGASARFRQRRKEKekeanlaIEKLQSQVKDLEKNMEKLKTERNFYRSERDRLRD 420
                 6789***********99864555555889999************9999999999998886 PP

>> PIEZO  Piezo
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   8.2     0.032        52      77     193 ..     359     517 ..     352     545 .. 0.69

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.032
       PIEZO  77 adlraskilasrGaeLfeakikkevkarkeeekksleqlkrqmerikakqqkikkg.........................................kk 134
                 ++ ra +  as  +   +++ +ke +  +e+ + ++++l ++me++k++ + ++++                                         ++
  KHJ33447.1 359 NEKRARNAGASARFRQRRKEKEKEANLAIEKLQSQVKDLEKNMEKLKTERNFYRSErdrlrdimlrtpetryvamqtpqsppqiprsfpdqletfsgTQ 457
                 566777777777777788888999999999999****************99888887888888888887777777777777777776666665554422 PP

       PIEZO 135 eseeee.lakeeeeeeeeaeeekkksekkkwwrPwvdhasvvrsgdYylFesdseeeeee 193
                 ++ + +   ++ee+e++++ + +++++  +++ P +++++++ s +Y + +  ++ ++  
  KHJ33447.1 458 QTISGRhDINSEEDESKRRGNIRDSFTDASFVVPSMSQPDLKASTGYSMIDIAQNTQHLY 517
                 222222122233333444555555556777777999999999999999988766665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (549 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1445  (0.0805957); expected 358.6 (0.02)
Passed bias filter:                      668  (0.0372581); expected 358.6 (0.02)
Passed Vit filter:                       106  (0.00591221); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.67u 0.22s 00:00:00.89 Elapsed: 00:00:00.39
# Mc/sec: 4261.36
//
Query:       KHJ33448.1  [L=154]
Description: putative upf0220 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.017   15.2   3.1      0.019   15.0   3.1    1.1  1  Nop16     Ribosome biogenesis protein Nop16


Domain annotation for each model (and alignments):
>> Nop16  Ribosome biogenesis protein Nop16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   3.1   1.1e-06     0.019      83     156 ..      32     116 ..       3     144 .. 0.59

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.1e-06
       Nop16  83 e............eesdekklskgearieRDeeGki.vkviegkkkkeneled.pleeleedeekeeeeekkkktevvkeLekeaare 156
                              +++dek++  +   ++RD++G+i + ++     +++++ +   e++e++e+ eee+++++  + +k+L++ ++re
  KHJ33448.1  32 PtikrgistclenQKADEKSIVDNSEIVIRDDNGEIqIGIVAT---SSSPMPSfGDEDVEQHEAREEEKDRQRLVDAIKNLQRNRNRE 116
                 0222333345555899999****************85556665...444444433344444444444444455566667777766664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1056  (0.058899); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1217.39
//
Query:       KHJ33449.1  [L=231]
Description: putative nucleolar protein 16 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-63  213.1  12.6    4.9e-63  212.9  12.6    1.0  1  Nop16     Ribosome biogenesis protein Nop16


Domain annotation for each model (and alignments):
>> Nop16  Ribosome biogenesis protein Nop16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.9  12.6   2.8e-67   4.9e-63       1     210 []       5     217 ..       5     217 .. 0.91

  Alignments for each domain:
  == domain 1  score: 212.9 bits;  conditional E-value: 2.8e-67
       Nop16   1 rqrrkarssvkkakkrkksklkkkvnilgnpiiaenWdkkkTlkqNYkrLGLvaklnapaGgvekklskanekeekekkkleeeesdekklskgearie 99 
                 +q++k+rss++k++   k k +kk++ilgn+iia+nWd+kkTl+qNY++LGL+++ln+++Ggvek  s +++++++  +k +++++  k +++gear+e
  KHJ33449.1   5 LQKKKRRSSNPKIRL--KPK-SKKLKILGNSIIAANWDHKKTLSQNYRNLGLTSRLNSTTGGVEKLISGTQSNSST-LSKFQISNTILKGIEPGEARVE 99 
                 69**********994..555.57*********************************************98776665.57889999************** PP

       Nop16 100 RD.eeGkivkviegkkkkeneledpleeleedeekeeeee........kkkktevvkeLekeaarekakkerhlsereeewlerLvekhGdDyeaMarD 189
                 RD  +Gki++vi++ k+k+n+l+d +++ +e+e+  ++ +         +++++++++Le++a+r  +kk+r+lsere+ w+e+Lv ++Gd+ye+MarD
  KHJ33449.1 100 RDpLSGKILRVIHQ-KSKSNPLNDLISSESEEETICKD-KnfsdhsnyINTENNIIRQLEEQASRVPEKKQRKLSEREQIWIENLVTQYGDEYEKMARD 196
                 **************.9********77775544444444.4599***9988889********************************************** PP

       Nop16 190 rkLNpmqqtegdlkrrikkwk 210
                  kLNpmqqt++d++rri+kwk
  KHJ33449.1 197 SKLNPMQQTSADIRRRIEKWK 217
                 ********************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1191  (0.0664287); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1685.12
//
Query:       KHJ33450.1  [L=86]
Description: putative 50s ribosomal protein l30 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-13   50.4   0.2    1.9e-13   50.1   0.2    1.1  1  Ribosomal_L30  Ribosomal protein L30p/L7e


Domain annotation for each model (and alignments):
>> Ribosomal_L30  Ribosomal protein L30p/L7e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.2     1e-17   1.9e-13       2      51 .]       5      54 ..       4      54 .. 0.98

  Alignments for each domain:
  == domain 1  score: 50.1 bits;  conditional E-value: 1e-17
                   EEEE-S-STTS-HHHHHHHHHTT-SSTTEEEE--SSHHHHHHHHHCCCGE CS
  Ribosomal_L30  2 fVtrirsiigvppkvrktLqlLgLrkingtvvklntpsirGmLkkVkhlV 51
                   ++t+irs ig++++ r +L++LgLrk+ +tv+++ +p+ +G++  Vk+lV
     KHJ33450.1  5 RITLIRSGIGLTKRSRGVLEALGLRKRMKTVFLPVSPEAAGQIMRVKELV 54
                   8************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       284  (0.0158403); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.24s 00:00:00.58 Elapsed: 00:00:00.38
# Mc/sec: 680.39
//
Query:       KHJ33451.1  [L=193]
Description: hypothetical protein EV44_g3074 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       287  (0.0160076); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1459.85
//
Query:       KHJ33452.1  [L=136]
Description: hypothetical protein EV44_g3162 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       237  (0.0132188); expected 358.6 (0.02)
Passed bias filter:                      205  (0.011434); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 1019.60
//
Query:       KHJ33453.1  [L=683]
Description: hypothetical protein EV44_g4711 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-22   79.2   0.0    5.4e-22   78.1   0.0    1.6  1  Alpha-amylase_C  Alpha amylase, C-terminal all-beta domain
    3.4e-17   62.6   0.0    8.4e-17   61.3   0.0    1.7  1  CBM_48           Carbohydrate-binding module 48 (Isoamylase N
    8.6e-15   55.1   0.1    3.5e-11   43.3   0.0    2.3  2  Alpha-amylase    Alpha amylase, catalytic domain


Domain annotation for each model (and alignments):
>> Alpha-amylase_C  Alpha amylase, C-terminal all-beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.1   0.0     9e-26   5.4e-22       6      95 ..     590     679 ..     587     680 .. 0.95

  Alignments for each domain:
  == domain 1  score: 78.1 bits;  conditional E-value: 9e-26
                      ETTSSEEEEEECTTTEEEEEEE-SSSSEEECEEESSSSSEEEEETTCTTSGCCTTT-.SSTSS-EEEECT..TCBSEEEEEEESTTEEEEEEE CS
  Alpha-amylase_C   6 deenkviaFeRgdgekllvvfNfhpsnsrqdyrvgvpaagkyrdvlntdaeeyggsg.lgntgkvvtvdd..dgransltltlpprsalvlkv 95 
                       + +++i+FeR +   l+ vfNf+p+ s++dy++gv+++g+y ++l td+e++gg g +  + k++t+++  dgr+n++++++p+r+a ++++
       KHJ33453.1 590 KKSDNIIVFERAG---LVWVFNFNPQRSFSDYKIGVEKEGTYLVILTTDSEKFGGFGrISTDIKHFTSPSpwDGRKNQMQVYIPARTATIFAL 679
                      5679*********...*****************************************9*******************************9976 PP

>> CBM_48  Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.3   0.0   1.4e-20   8.4e-17       2      83 ..      57     141 ..      56     142 .. 0.96

  Alignments for each domain:
  == domain 1  score: 61.3 bits;  conditional E-value: 1.4e-20
                 SEEEEESSCEEEEEEEE-TTSSEEEEEECGTTTEEECCB-EEECGGCEEEEEEET.....TSTTTT.EEEEEEEETTSCEEEE--TT CS
      CBM_48   2 lGahvsedekgvnfrvwapnAekVslvldfnnwdaeeiplkrrrtggvWelflpg.....dlphgslrYkyrvkgpsgekklllDPy 83 
                 +G++v++ ++++++r+wapnA+++ l++dfn+w+ +++pl+ r++ gv+e+ lp+     ++ph+s ++k+ +  psge+  +++++
  KHJ33453.1  57 FGFNVNDSNNDITYREWAPNATEAFLIGDFNDWNRQSHPLT-RDKYGVFEIKLPAinsqpAIPHNS-KVKISLIIPSGERIERIPAW 141
                 8****98779*******************************.69*********************8.*****************999 PP

>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.0   5.8e-15   3.5e-11      10      80 ..     208     279 ..     205     296 .. 0.93
   2 !    9.5   0.0   0.00011      0.67     144     185 ..     311     368 ..     285     497 .. 0.67

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 5.8e-15
                    CCCCCCCT-SCEEE-B-CE.-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TT CS
  Alpha-amylase  10 LdYlkeLGvtaiwlsPifk.spqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsde 80 
                    L+ +k LG +ai l  +++ + +a +gY ++ + +   ++G  edlkeLi+kahe+g+ v+lD+V  H s++
     KHJ33453.1 208 LQRIKLLGYNAIQLMAVMEhAYYASFGYQVTSFFAASSRYGVPEDLKELIDKAHELGLVVLLDVVHSHASKN 279
                    7789**************9777899********************************************986 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00011
                    B-TTTCCCCCCCCCCCCCCCTTT.-SEEEETTCCCTTT.CCCC..............H CS
  Alpha-amylase 144 Lnteneevrkelkdvvkfwlekg.idGfRlDvvkhvsk.veal..............e 185
                    +n+ n ev + l   ++fw++k   dGfR D v  +   ++++               
     KHJ33453.1 311 FNYGNYEVLRFLLSNLRFWMDKYnFDGFRFDGVTSMLYtHHGIgtgfsggyheyfgpC 368
                    688999999999999******999*******887654402333555555555554432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (683 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       350  (0.0195214); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 4714.94
//
Query:       KHJ33454.1  [L=389]
Description: putative zn 2cys6 transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.3e-09   35.6   8.7    2.2e-08   34.1   8.7    1.9  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.1   8.7   1.2e-12   2.2e-08       3      36 ..      18      50 ..      16      53 .. 0.91

  Alignments for each domain:
  == domain 1  score: 34.1 bits;  conditional E-value: 1.2e-12
                -HHHHHCT---STSSSS-HHHHHCTHHHCCCCTC CS
     Zn_clus  3 CdnCrkkKvKCdakkPaCsnCkklnleCtfyses 36
                Cd C++ Kv+Cd++kP+C++C++l+ +C  ys  
  KHJ33454.1 18 CDICSSSKVRCDKQKPTCGRCERLGQPCL-YSPA 50
                ****************************9.7765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       931  (0.051927); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2944.04
//
Query:       KHJ33455.1  [L=276]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.36
# Mc/sec: 2267.70
//
Query:       KHJ33456.1  [L=256]
Description: putative 40s ribosomal protein s1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-89  298.7   4.4    2.1e-89  298.4   4.4    1.0  1  Ribosomal_S3Ae  Ribosomal S3Ae family
     0.0042   17.6   0.3      0.054   14.0   0.0    2.3  2  SUI1            Translation initiation factor SUI1
  ------ inclusion threshold ------
      0.037   13.6   0.2        1.2    8.7   0.1    2.1  2  DGCR6           DiGeorge syndrome critical region 6 (DGCR6) p
      0.071   13.1   0.5       0.38   10.8   0.0    2.3  2  NEMO            NF-kappa-B essential modulator NEMO


Domain annotation for each model (and alignments):
>> Ribosomal_S3Ae  Ribosomal S3Ae family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  298.4   4.4   4.8e-93   2.1e-89       3     202 .]      17     221 ..      15     221 .. 0.99

  Alignments for each domain:
  == domain 1  score: 298.4 bits;  conditional E-value: 4.8e-93
                     ----S-TCCSEEEEEEEB-TTSSSSEEEEEEEE--BSSSESHHSHTT-EEEEESHHHHTCSHTSSSEEEEEEEEEEESSEEEEEEEEEEE-HHHH CS
  Ribosomal_S3Ae   3 kkkvvDkfkkKeWydvkaPslfgkreiGktlvnrtqgtkiaseklkgrvvevslaDLtndekeqafrklklkieevqgknaltnFkgmeltrDkl 97 
                     kkk+ D+f++K+Wy+vkaPs f+ r++Gktlvnrt+g k+a+++lkgr++evslaDL++de ++afrk+klk+eevqgkn+ltnF+g+++t+Dkl
      KHJ33456.1  17 KKKTLDPFTRKDWYQVKAPSSFQIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDE-DHAFRKIKLKVEEVQGKNCLTNFHGLDFTSDKL 110
                     89**********************************************************8.779****************************** PP

                     HHH--SSB-EEEEEEEEEESSSEEEEEEEEEEE-ST.T.....B---HHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHTTTHHHHHHHHHHTTTS CS
  Ribosomal_S3Ae  98 rslvrkwsslIeaivdvktkDgyllrvfvvafTkkr.n.....sYakssqkkaIrkkmveilteeaseldlkelvkklipeslgkeiekeakkIy 186
                     rslvrkw++lIea+++vkt+D+yl+r+f++afTk+r n     +Ya +sq++aIrkkm+ei+++eas+++l++l  klipe +g+eiek+++ Iy
      KHJ33456.1 111 RSLVRKWQTLIEANITVKTTDDYLIRLFAIAFTKRRpNqikktTYAATSQIRAIRKKMTEIMQREASSCTLTQLTAKLIPEVIGREIEKATQGIY 205
                     ************************************989******************************************************** PP

                     -EEEEEEEEEEEEE-S CS
  Ribosomal_S3Ae 187 plrnveirKvkvlkkP 202
                     pl+nv+irKvk+lk+P
      KHJ33456.1 206 PLQNVHIRKVKLLKAP 221
                     **************98 PP

>> SUI1  Translation initiation factor SUI1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   1.2e-05     0.054       3      50 ..      82     129 ..      80     138 .. 0.90
   2 ?    0.9   0.0      0.15   6.8e+02      10      36 ..     160     186 ..     157     191 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.2e-05
        SUI1   3 pkihirleqrggrKkvTtvsgleafgidlkklakelkkkfacsgsvvk 50 
                 +ki++++e+ +g+ ++T  +gl+    +l +l++++++   ++ +v  
  KHJ33456.1  82 RKIKLKVEEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANITVKT 129
                 69********************999999*****************943 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.15
        SUI1  10 eqrggrKkvTtvsgleafgidlkklak 36 
                 + r  rKk+T +   ea    l +l  
  KHJ33456.1 160 QIRAIRKKMTEIMQREASSCTLTQLTA 186
                 557779999999998888877777765 PP

>> DGCR6  DiGeorge syndrome critical region 6 (DGCR6) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.018        80      50      86 ..      56      90 ..      27     100 .. 0.74
   2 ?    8.7   0.1   0.00027       1.2      13      73 ..     147     208 ..     136     220 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.018
       DGCR6 50 LAlalldgtvfeivkgLleiqhltekhLykqRlklen 86
                 A+  l g +fe+  +L ++q+ +++   k +lk+e+
  KHJ33456.1 56 NANDALKGRIFEV--SLADLQKDEDHAFRKIKLKVEE 90
                36778999****8..899*********9999999986 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00027
       DGCR6  13 seeqqerhYfllseLqklvkelpsslqqRlsyelLsdLAlalldgtv.feivkgLleiqhlt 73 
                  ++ ++  Y  +s+++++ k++ + +q+  s  +L++L   l+ + +  ei k+ + i  l+
  KHJ33456.1 147 PNQIKKTTYAATSQIRAIRKKMTEIMQREASSCTLTQLTAKLIPEVIgREIEKATQGIYPLQ 208
                 45667889**********************************99988346666555554444 PP

>> NEMO  NF-kappa-B essential modulator NEMO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   8.4e-05      0.38      22      56 ..      54      88 ..      50      99 .. 0.89
   2 ?   -1.1   0.1      0.43   1.9e+03      43      52 ..     242     251 ..     239     254 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 8.4e-05
        NEMO 22 lkqsNqalkeRlEeLsawqekqkeerefleeklre 56
                lk  N+alk+R+ e s    ++ e+  f + kl+ 
  KHJ33456.1 54 LKNANDALKGRIFEVSLADLQKDEDHAFRKIKLKV 88
                89**************************9999984 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.43
        NEMO  43 qkeereflee 52 
                 q+ eref e+
  KHJ33456.1 242 QRVEREFKEQ 251
                 899****987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       884  (0.0493056); expected 358.6 (0.02)
Passed bias filter:                      551  (0.0307323); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.18s 00:00:00.64 Elapsed: 00:00:00.36
# Mc/sec: 2105.27
//
Query:       KHJ33457.1  [L=132]
Description: hypothetical protein EV44_g2487 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       789  (0.0440069); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1061.93
//
Query:       KHJ33458.1  [L=407]
Description: hypothetical protein EV44_g3445 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       707  (0.0394333); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.34
# Mc/sec: 3552.95
//
Query:       KHJ33459.1  [L=580]
Description: putative histone acetyltransferase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.7e-32  109.8   0.0    9.8e-32  108.8   0.0    1.6  1  Radical_SAM_C    Radical_SAM C-terminal domain
    3.7e-16   59.9   0.0    1.1e-15   58.4   0.0    1.8  1  Radical_SAM      Radical SAM superfamily
    5.6e-09   36.2   0.0      1e-08   35.4   0.0    1.5  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    6.4e-06   26.1   0.0    1.6e-05   24.8   0.0    1.6  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
      0.003   17.9   0.0     0.0065   16.9   0.0    1.5  1  Acetyltransf_7   Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Radical_SAM_C  Radical_SAM C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.8   0.0   2.7e-35   9.8e-32       2      81 ..     332     411 ..     331     412 .. 0.98

  Alignments for each domain:
  == domain 1  score: 108.8 bits;  conditional E-value: 2.7e-35
  Radical_SAM_C   2 dgvKlypllvikgTeLaelyksgeykplsleeyvdlvadilellppdirvhRltgdipkelliagpwhknlreliekrlk 81 
                    dg+K+yp+lvi+gT+L+el++ g++k ++++ ++d+va+il+l+pp++r++R+++dip++l+ +g++++nlrel+++r+k
     KHJ33459.1 332 DGLKIYPTLVIRGTGLYELWRTGRFKNYTPNALIDIVARILALVPPWVRIYRVQRDIPMPLVTSGVENGNLRELALSRMK 411
                    9******************************************************************************7 PP

>> Radical_SAM  Radical SAM superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.4   0.0   3.1e-19   1.1e-15       9     158 ..     126     314 ..     115     323 .. 0.82

  Alignments for each domain:
  == domain 1  score: 58.4 bits;  conditional E-value: 3.1e-19
                  S--TTTSCCTT................HHHHHHHHHHHHHHHHHHHHHHH...HHTTSEEEEEESSTGGGSTTHHHHHHHHHHTC............. CS
                  xxxxxxxxxxx................xxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............. RF
  Radical_SAM   9 lrCsfCarpet................vrregrgrslsveeileevkelk...aekgvkevilgggepllypdfvellerlakla............. 74 
                  + C++C+ + +                + r  r+r+ + e+    v+++k   ++ ++ e i++gg+ +  p+ +++ +                   
   KHJ33459.1 126 NICVYCPGGPDsdfeystqsytgyeptSMRAIRARYDPFEQARGRVDQIKslgHSVDKVEYIIMGGTFMSLPESYRDEFISQLHNalsgyqgkdvdec 223
                  34*************************55566666666666555554444433888866666667767777777666666666557899999999999 PP

                  .....CCTEEEEEEECSSCHG...HHHHHHHHHTT-SEEEEEEBSSSHHHHHHHHTCTSHHHHHHHHHHHHHHTTSETEEEEEEEBTTTSHH CS
                  .....xxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM  75 .....vpgiritvetngtlpd...eeklerllelgvdrvslgleaaddekvlklmnrghtfeevlealeklreagikrvvdrivglpGende 158
                        ++i+++ +t +t+pd     +l  +l++g++r+++g++++ ++ v + +nrght+++v e++ + ++ag+k+v+++++ lp++  e
   KHJ33459.1 224 vaageMSNIKCVGITIETRPDyclQPHLSSMLRYGCTRLEIGVQSLYED-VARDTNRGHTVSAVAETFCLSKDAGFKVVSHMMPDLPNVGVE 314
                  999999*******************************************.*********************************999988764 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   0.0   2.9e-12     1e-08       3     117 .]     419     556 ..     417     556 .. 0.77

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 2.9e-12
                     HHHHHHHHHTHHHHHHHHHHH...HHHHHHSTTC...EEEEEEETTE...EEEEEEEEEEET........TSTTEEEEEEEEE..........SG CS
  Acetyltransf_1   3 dlvellvesffppnedaseee...feesfsleae...gllvaeedge...liGfisllkipd........ekggvayieslaV..........sp 70 
                     d+++ +v + +  n+ ++  +   ++++    a+   ++++a+ed++   liG ++l+k  +          +++  +++l+V          +p
      KHJ33459.1 419 DVRTREVGINEVKNKIRPTQVelvRRDY---VANggwETFLAYEDPKqdiLIGLLRLRKCSQkytfrpelVGQPTSLVRELHVygsavpvharDP 510
                     6666666666644444444444557777...4441256666999977788************99999999666777788888888888*****66 PP

                     GG.TTSSHHHHHHHHHHHHHHHT.TESEE.EEEEETTEHHHHHHHHHTTE CS
  Acetyltransf_1  71 ey.rgkGlGsaLlealeeraree.gikki.vlaveedndaairlYeklGF 117
                     +  +++G+G++L+e++e++ar e   +ki v+    +  +++ +Y+klG+
      KHJ33459.1 511 KKfQHQGYGTLLMEQAEKIARCEhRSTKIsVI----SGIGTRDYYRKLGY 556
                     655********************888999555....99*******88**8 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   4.5e-09   1.6e-05      61     107 ..     511     557 ..     510     566 .. 0.87

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 4.5e-09
  Acetyltransf_10  61 peyrgqGigkaLleaveeeaekdgikl.eltvnaspyavpfYeklGFk 107
                      +++++qG+g+ L+e++e+ a+ ++++  +++v +    +++Y+klG+ 
       KHJ33459.1 511 KKFQHQGYGTLLMEQAEKIAR-CEHRStKISVISGIGTRDYYRKLGYW 557
                      789****************95.555555******************96 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   1.8e-06    0.0065      34      74 ..     511     556 ..     453     556 .. 0.73

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 1.8e-06
                     GGGTTSSHHHHHHHHTT..SEEEEE.EEEETHH.....HHHHHHHHTTE CS
  Acetyltransf_7  34 peyrgkGiGraLleaae..kgiile.qlelnae.....kaikfYeklGF 74 
                     ++++ +G+G+ L+e ae    ++ +  ++   +      ++++Y+klG+
      KHJ33459.1 511 KKFQHQGYGTLLMEQAEkiARCE-HrSTKI--SvisgiGTRDYYRKLGY 556
                     38***********9522243443.212222..1233446688******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (580 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4011.56
//
Query:       KHJ33460.1  [L=329]
Description: putative succinyl- synthetase alpha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.9e-27   93.5   4.4    1.1e-26   93.3   1.2    2.2  2  CoA_binding    CoA binding domain
    3.2e-23   82.2   0.2    5.8e-23   81.4   0.2    1.4  1  Ligase_CoA     CoA-ligase
    3.4e-08   33.4   0.1    5.9e-08   32.6   0.1    1.4  1  Succ_CoA_lig   Succinyl-CoA ligase like flavodoxin domain
     0.0033   17.9   0.0     0.0073   16.8   0.0    1.6  1  CoA_binding_2  CoA binding domain


Domain annotation for each model (and alignments):
>> CoA_binding  CoA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.3   1.2   2.5e-30   1.1e-26       2      96 .]      39     131 ..      38     131 .. 0.99
   2 ?    0.9   0.1      0.16   7.4e+02       2      43 ..     177     219 ..     176     240 .. 0.76

  Alignments for each domain:
  == domain 1  score: 93.3 bits;  conditional E-value: 2.5e-30
                  TTEEEEEETTTSHHHHHHHHHHHHHHECEEEEEEC-TTTTTCEETTEEEESCHHHHHHHCTTTEEEEES-HHHHHHHHHHHHHTT-SEEEEESST CS
  CoA_binding   2 kdtkviviGagglgiaglyhfkeklkygikavfgvnprkvgtevlglpvyksvdeleektevdvavitvPaesaqeavdelveagikgiviiteg 96 
                  k+tkvi +G++g+  +g++h  + ++yg+++v+g+np+k+gt +l+lpv+ +v++++++t+++++ i+vP++ a+++++e++ a+i+++v+iteg
   KHJ33460.1  39 KETKVIYQGFTGK--QGTFHATKAIEYGTQVVGGTNPKKAGTLHLDLPVFATVSDAVKSTGATASAIFVPPPVAAASIEEAITAEIPLVVCITEG 131
                  89***********..******************************************************************************97 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.16
                  TTEEEEEETTTSHHHHHHHHHHHHHHECEEEEEEC-TT.TTTC CS
  CoA_binding   2 kdtkviviGagglgiaglyhfkeklkygikavfgvnpr.kvgt 43 
                  k+++++++  +g+ + +++++  + + g + v+g++++ + gt
   KHJ33460.1 177 KRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLVIGIGGDpFSGT 219
                  5677888888888888888888888999999999988754444 PP

>> Ligase_CoA  CoA-ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.4   0.2   1.3e-26   5.8e-23       1     153 []     184     307 ..     184     307 .. 0.96

  Alignments for each domain:
  == domain 1  score: 81.4 bits;  conditional E-value: 1.3e-26
                 EESSHHHHHHHHHHHHHT..............T--BSEEEE-TSS--..........HHHHHHHHHHHHS-TT-SEEEEEEEESSSEHHHHHHHHHHHH CS
  Ligase_CoA   1 lvnGGtLayeamdlikealgdvasnkklknvlgseqheiidlGddaftkGrpHPmiDptkriealkklaadpevkvilldivlGygahedpaaellkai 99 
                 ++++GtL+yea++++++a              g +q+ +i++G+d f          +t++i++lk++++d+e+++i++ +++G g++e+ aae+lk  
  KHJ33460.1 184 VSRSGTLTYEAVNQTTQA--------------GLGQSLVIGIGGDPFS---------GTNFIDCLKIFLEDKETDGIIMIGEIG-GSAEEDAAEFLKIN 258
                 689***************..............***************8.........***************************.***********987 PP

                 HHTT...--S-EEEEEECTTHH.....HHHHHHHTTTSSEEE-SSHHHHHHHHH CS
  Ligase_CoA 100 keakaegrelpvvarvaGteadpqelseqakaleeagveiasskaqalraakav 153
                 ++++     +pvv+++aG +a+p++++++a+a+ ++g   a+sk  +l+aa+++
  KHJ33460.1 259 NSMN-----KPVVSFIAGISAPPGRRMGHAGAIVSGGKGGADSKISTLEAAGVI 307
                 7775.....9***************************************99875 PP

>> Succ_CoA_lig  Succinyl-CoA ligase like flavodoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.1   1.3e-11   5.9e-08       1     106 [.     178     286 ..     178     310 .. 0.82

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 1.3e-11
  Succ_CoA_lig   1 pGkialisqSGalalalldwaasrglgfskvvslGn..eadvdvadlleylaedpetkvillylEsird....grkflsaarraarkkpvvvlksGr 91 
                   +G+i+++s SG+l  + ++++++ glg s v+ +G    + +++ d+l+ + ed+et+ i++  E  +     +++fl++  +++  kpvv + +G 
    KHJ33460.1 178 RGRIGIVSRSGTLTYEAVNQTTQAGLGQSLVIGIGGdpFSGTNFIDCLKIFLEDKETDGIIMIGEIGGSaeedAAEFLKINNSMN--KPVVSFIAGI 272
                   69*********************************955689**********************9965542223777777777775..*****99998 PP

  Succ_CoA_lig  92 seagaraaashtgal 106
                   s+   r  + h ga+
    KHJ33460.1 273 SAPPGRR-MGHAGAI 286
                   7654443.3455555 PP

>> CoA_binding_2  CoA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   1.6e-06    0.0073      34     114 ..      72     161 ..      50     163 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.6e-06
                    SSS-.SEETT.EES----T......T--EEEE-S-HHHHGGGHHHHHHH--SEEEE-TT.---HHHHHHHHH....TT-EEE.ES-HHHH CS
  CoA_binding_2  34 npke.eeilg.ekvyaslaed..pepvdlvdvftppeatpeivkealalgakavwlqpg.sedeeaaelaee....agirvvgdrCilve 114
                    npk+ ++++   +v+a+++++   +   +  +f+pp ++++ ++ea++++++ v++  + + + +++++ +      + r+vg++C++++
     KHJ33460.1  72 NPKKaGTLHLdLPVFATVSDAvkSTGATASAIFVPPPVAAASIEEAITAEIPLVVCITEgVPQHDMIRITDIlktqSKTRLVGPNCPGLI 161
                    6776544444478999999744677788999******************99998888764556666655554555789999*****9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       499  (0.027832); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2521.75
//
Query:       KHJ33461.1  [L=490]
Description: putative mrna cap guanine-n7 methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-68  231.7   0.0    4.2e-45  154.3   0.0    2.8  2  Pox_MCEL         mRNA capping enzyme
    9.5e-09   35.9   0.1    7.2e-07   29.9   0.0    3.2  2  Methyltransf_12  Methyltransferase domain
    1.1e-08   35.7   0.0     0.0012   19.5   0.0    2.6  2  Methyltransf_25  Methyltransferase domain
    1.3e-06   28.3   0.0    0.00015   21.6   0.0    2.3  2  Methyltransf_31  Methyltransferase domain
    4.2e-06   26.7   0.0    8.5e-06   25.7   0.0    1.5  1  Methyltransf_23  Methyltransferase domain
    2.2e-05   25.0   0.0       0.31   11.7   0.0    2.5  2  Methyltransf_11  Methyltransferase domain
     0.0031   16.7   0.0     0.0056   15.9   0.0    1.3  1  NNMT_PNMT_TEMT   NNMT/PNMT/TEMT family
     0.0033   16.4   0.0     0.0056   15.6   0.0    1.4  1  Methyltransf_9   Protein of unknown function (DUF1698)
  ------ inclusion threshold ------
      0.021   13.6   0.1      0.021   13.6   0.1    1.8  2  Raftlin          Raftlin
       0.12   11.8   0.6        1.7    8.0   0.0    2.5  3  Methyltransf_4   Putative methyltransferase


Domain annotation for each model (and alignments):
>> Pox_MCEL  mRNA capping enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.3   0.0   2.3e-48   4.2e-45       4     206 ..     100     343 ..      97     365 .. 0.78
   2 !   74.0   0.0   6.2e-24   1.1e-20     205     332 ..     369     489 ..     364     490 .] 0.91

  Alignments for each domain:
  == domain 1  score: 154.3 bits;  conditional E-value: 2.3e-48
    Pox_MCEL   4 aetesevtdlvathynerpetgellkkRiastiiylrnlnNyiKslLiseyasktkl...............desnklkvLdldcgkGgDLeKyekg.. 85 
                 a+ +++++d+v++hyn+ pe g+    +++s+i+ lr++nN++Ks++i+++  ++++                ++  ++vLd++cgkGgDL K++ +  
  KHJ33461.1 100 ANATKGIHDAVKQHYNAVPERGR-DWRKTSSRIKGLRSFNNWVKSVIIQKFSPNEDFkpsvkynddafseksSTNTGISVLDIGCGKGGDLGKWQLApq 197
                 567899****************5.44557899******************98776654444444333332212234589****************9844 PP

    Pox_MCEL  86 eIsklvatDiaeesieeckeRY.......nklrsek....kskyykFdaelirsdsfvssvrevfed..............yelkfdivslQFaiHYsF 159
                  ++ +v++D+a+ si ++keR+       +  rs++    k ++  F  e++  d+f +s++++                   + fd+vs+ F++HY+F
  KHJ33461.1 198 PVELYVGIDPADISITQAKERFrqmasrdRGSRSGRgihgKLHQRLFYGEFYVQDCFGESIEKIPIIrkvgfdgsgrpssfGGGGFDVVSMMFCMHYAF 296
                 59********************887766522333321111223344666************986422458899999999766789************** PP

    Pox_MCEL 160 eseekartvlrNvaellasGGkvlgTtpdgdelskltvkklkviekd 206
                 e e kar +l+Nva  l++GG+++g +p++d+ls++++k   +++ +
  KHJ33461.1 297 ENEMKARLMLKNVAGALKKGGRFIGCIPNSDVLSEQVKKFNARMKTK 343
                 *********************************99998887776533 PP

  == domain 2  score: 74.0 bits;  conditional E-value: 6.2e-24
    Pox_MCEL 205 kdlpsfgNsiyvvkfeeekiev....plfGakYeynledvvkdvpEyivkfealvklaeeYgleLvdkkdfaeiieesikke.lkklikrvskleerks 298
                 +d++s+gN iy+v+f  e++e+    p++G kY+++l ++v++vpEy+v+ e ++++ae+++le+ ++k+f +i e + ++e l  l +r+        
  KHJ33461.1 369 EDTASWGNGIYKVRFPGETPEDgifrPPYGWKYSFYLHEAVEEVPEYVVPWEMFRAIAEDFNLEMQYHKPFLDIWEAEKDDEvLGPLSERMG------- 460
                 5899**************99999999****************************************************87777888888888....... PP

    Pox_MCEL 299 tknfeelnrsalkstlgkdeeealsyYlvfvfeK 332
                        +r+++   ++k+e ea+s+Y++f f K
  KHJ33461.1 461 -----VRQRDRGPLLISKEEIEAASFYVAFCFYK 489
                 .....3466677778*****************99 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0     4e-10   7.2e-07       1      99 []     179     319 ..     179     319 .. 0.90
   2 ?   -1.0   0.1       1.7     3e+03      36      66 ..     338     368 ..     328     377 .. 0.67

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 4e-10
  Methyltransf_12   1 LeiGcGtGsllralleklpdieyt.gvDispsaiedakeklakrennnnnnvelealdlldldgg............................. 64 
                      L+iGcG G  l  +  + +++e++ g+D+   +i++ake++++   ++      + ++ ++l+++                             
       KHJ33461.1 179 LDIGCGKGGDLGKWQLAPQPVELYvGIDPADISITQAKERFRQMASRDRGSRSGRGIH-GKLHQRlfygefyvqdcfgesiekipiirkvgfdg 271
                      8********9999988888888777******************999887777777777.455555789************************** PP

  Methyltransf_12  65 .........ssfDlvvasnvlhhl....kdirevldnirklLkpgGrl 99 
                               + fD+v + +++h+      + r +l+n++ +Lk+gGr+
       KHJ33461.1 272 sgrpssfggGGFDVVSMMFCMHYAfeneMKARLMLKNVAGALKKGGRF 319
                      **************************86666799************86 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.7
  Methyltransf_12  36 akeklakrennnnnnvelealdlldldggss 66 
                      a+ k++ ++++ +n+ + ++++ ++ ++g++
       KHJ33461.1 338 ARMKTKLEKDQAVNQHDSKNNEESEGEEGEA 368
                      4555555666677777777777777766644 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   6.8e-07    0.0012       1      43 [.     178     221 ..     178     237 .. 0.87
   2 !   13.5   0.0   4.8e-05     0.086      59      97 .]     277     317 ..     266     317 .. 0.83

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 6.8e-07
                      EEEET-TTSHHHHHHHCTS.TSSEEEEEESSHHHHHHHHHHHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrl.gkakvtgvDiseemleaareraee 43 
                      vLd+GcG+G ++ +++ +  + + ++g+D+++  + +a+er+++
       KHJ33461.1 178 VLDIGCGKGGDLGKWQLAPqPVELYVGIDPADISITQAKERFRQ 221
                      9***********9877664358999****************975 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 4.8e-05
                      SSSTTTEEEEEEESTGGG.SSHH.HHHHHHHHHHHHEEEEE CS
  Methyltransf_25  59 pfedgsfDlvvssgalhh.lsde.dlekalkeiarvLkpgG 97 
                      +f  g fD+v +++++h+ +++e +++ +lk++a +Lk+gG
       KHJ33461.1 277 SFGGGGFDVVSMMFCMHYaFENEmKARLMLKNVAGALKKGG 317
                      678899***********9887662445699**********9 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   8.5e-08   0.00015       3      51 ..     174     222 ..     172     226 .. 0.89
   2 ?    4.3   0.0     0.017        31      91     136 ..     303     355 ..     275     374 .. 0.63

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 8.5e-08
  Methyltransf_31   3 kglrvlDlGCGtGeltfelaeelgpkae.vvGiDiseeaielArenaqkl 51 
                       g++vlD+GCG+G ++ ++  ++ +  e +vGiD    +i++A+e+ ++ 
       KHJ33461.1 174 TGISVLDIGCGKGGDLGKWQ-LAPQPVElYVGIDPADISITQAKERFRQM 222
                      6899***************9.77777779****************99875 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.017
  Methyltransf_31  91 dkileeiervlkpggilliedpr..llaelpakveeeskay.....evvegak 136
                         l+++  +lk+gg+++ + p+  +l+e+ +k+ + +k +     +v +++ 
       KHJ33461.1 303 RLMLKNVAGALKKGGRFIGCIPNsdVLSEQVKKFNARMKTKlekdqAVNQHDS 355
                      557899************99998666666666665555544554433333333 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   4.7e-09   8.5e-06      20     125 ..     172     339 ..     148     365 .. 0.65

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 4.7e-09
  Methyltransf_23  20 lraggrvLdiGcGtGillevl..rengfs.vtgvDlspeaveiae........................kakkaqkdqfdeqeaaepqg..... 81 
                       ++g +vLdiGcG+G  l     ++++++ ++g+D+ ++ +  a+                        +                  +     
       KHJ33461.1 172 TNTGISVLDIGCGKGGDLGKWqlAPQPVElYVGIDPADISITQAKerfrqmasrdrgsrsgrgihgklhQ------------------Rlfyge 247
                      68889**********77766646888886266****9887776644444444444444444444444440..................044444 PP

  Methyltransf_23  82 ..................................kfdlIvlrevlehvp.d...ppellrqiatllkpgGylllseplasl..........k 125
                                                         fd+++++++++    +       l+++a  lk gG+++ + p+++            
       KHJ33461.1 248 fyvqdcfgesiekipiirkvgfdgsgrpssfgggGFDVVSMMFCMHYAFeNemkARLMLKNVAGALKKGGRFIGCIPNSDVlseqvkkfnaR 339
                      4444444444444444444445555555555566*********99875425543446799*****************998766555544332 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   0.00017      0.31       1      41 [.     179     222 ..     179     239 .. 0.88
   2 !   10.8   0.0   0.00034       0.6      56      95 ..     277     320 ..     256     321 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00017
                      EEET-TTSHHHHHHH...HTTSEEEEEES-HHHHHHHHHHCCHH CS
  Methyltransf_11   1 LdvGcGtGrlaeala...krgarvvgvDlskemlklakekasee 41 
                      Ld+GcG+G  + +++   + ++ +vg+D+++  +++ake+ ++ 
       KHJ33461.1 179 LDIGCGKGGDLGKWQlapQPVELYVGIDPADISITQAKERFRQM 222
                      8***********999664444*****************998875 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00034
                      SS-TT-EEEEEEES-CCC-....CCHHHHHHHHHHHEEEEEEEE CS
  Methyltransf_11  56 pfednsfDlvvssevlhhv....edpekalkeiaRvLkpgGllv 95 
                       f  + fD+v + +++h+      + +  lk++a  Lk+gG+++
       KHJ33461.1 277 SFGGGGFDVVSMMFCMHYAfeneMKARLMLKNVAGALKKGGRFI 320
                      577788********999999765577889************997 PP

>> NNMT_PNMT_TEMT  NNMT/PNMT/TEMT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   3.1e-06    0.0056     159     215 ..     283     338 ..     279     371 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 3.1e-06
                     EEEEEEESSHHHH-SSHHHHHHHHHHHHTTEEEEEEEEEEEECS-SEEEETTEEEE- CS
  NNMT_PNMT_TEMT 159 advvvtifcleaacedleeylralrnlasllkpGGhlvlggvleeseynvGekkfsl 215
                     +dvv+ +fc+ +a e+  + +  l+n+a++lk+GG+++   + +++  +   kkf+ 
      KHJ33461.1 283 FDVVSMMFCMHYAFENEMKARLMLKNVAGALKKGGRFIG-CIPNSDVLSEQVKKFNA 338
                     8************************************84.33444444444444554 PP

>> Methyltransf_9  Protein of unknown function (DUF1698)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   3.1e-06    0.0056     109     164 ..     168     226 ..      88     231 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.1e-06
                     GGS.--TT-EEEEET-TTSHHH..HHHHHCT-SEEEEE---HHHHHHHH.HHHCCTTTT CS
  Methyltransf_9 109 phlsdlkgrtildvGcgnGyhl..wrmvgegaklvvGidPselfliqfe.avrkllged 164
                     +  s  +g ++ld+Gcg+G  l  w+++ +  +l vGidP+ + ++q +   r++ + d
      KHJ33461.1 168 EKSSTNTGISVLDIGCGKGGDLgkWQLAPQPVELYVGIDPADISITQAKeRFRQMASRD 226
                     5556667889********976444******************99998641566666655 PP

>> Raftlin  Raftlin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   1.1      0.44   7.8e+02     191     235 ..      53      96 ..      11     162 .. 0.42
   2 ?   13.6   0.1   1.2e-05     0.021     137     217 ..     298     375 ..     285     390 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.44
     Raftlin 191 kkkrsssedkvslenekpgalsgk.sseagaeeeaeseegkkgegp 235
                 + krs+s    ++++  + a  g+ ++e+ +++++e e++ ++   
  KHJ33461.1  53 ELKRSTSPPYRKQKRPGKRARIGDaEREQIRQRRLEREKELEA--A 96 
                 1111111111111111111111110111111122222211111..1 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 1.2e-05
     Raftlin 137 dqkiikelikkvqeaasrGlkFvgvipqyasqsksansssltsgaaeseeardekkkrsssedkvslenekpgalsgksse 217
                 ++ +++ ++k v  a ++G +F+g+ip+ +  s+ ++  +    +++++ ++d+  ++++s+++ ++e e+ +a +++s+ 
  KHJ33461.1 298 NEMKARLMLKNVAGALKKGGRFIGCIPNSDVLSEQVKKFNA---RMKTKLEKDQAVNQHDSKNNEESEGEEGEAEDTASWG 375
                 4556777899******************9977666665554...4555555666667777777777777766666666655 PP

>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1         2   3.7e+03      83     133 ..      61     113 ..      60     128 .. 0.67
   2 ?    8.0   0.0   0.00097       1.7       4      47 ..     177     221 ..     174     226 .. 0.80
   3 ?    1.0   0.0      0.14   2.5e+02      98     150 ..     304     354 ..     297     376 .. 0.59

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2
                     ---SGGG..GGGSTTSHHHHHHHHHHEEEEEEEEEEESHHHHHHHHHHHHHCS CS
  Methyltransf_4  83 PwfKkrh..hKrRllqpellkelarvLkkgGvlelaTDveeyaeemlkvleee 133
                     P+ K+++  ++ R+   e+ +  +r+L+ + +le+a    + ++ + + ++++
      KHJ33461.1  61 PYRKQKRpgKRARIGDAEREQIRQRRLEREKELEAAAAAANATKGIHDAVKQH 113
                     55555543345678888888888888888888888777777777777777766 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00097
                     EEEEET-TTSHHHHH..HHHHSTTSEEEEEES-HHHHHHHHHHHHH CS
  Methyltransf_4   4 vvleiGcGkGeflva..lAkknPdknflGiEirvkvvakvlkkiea 47 
                      vl+iGcGkG+ l +  lA  +P  +++Gi+    ++ ++ ++ ++
      KHJ33461.1 177 SVLDIGCGKGGDLGKwqLA-PQPVELYVGIDPADISITQAKERFRQ 221
                     689*******998652144.47999******999999999888765 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.14
                     HHHHHHHHHEEEEEEEEEEESHHHHHHHHHHHHHCSTTEEESSCCCSCCTCHC CS
  Methyltransf_4  98 ellkelarvLkkgGvlelaTDveeyaeemlkvleeeplferlskeeeleeepl 150
                      +lk++a +LkkgG +      +++  e +k++++  + + l+k+++++++  
      KHJ33461.1 304 LMLKNVAGALKKGGRFIGCIPNSDVLSEQVKKFNARMKTK-LEKDQAVNQH-D 354
                     5789999999999998765555555555555555553333.2222222222.2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1193  (0.0665402); expected 358.6 (0.02)
Passed bias filter:                      615  (0.034302); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 3389.65
//
Query:       KHJ33462.1  [L=1460]
Description: putative rna recognition domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-19   69.9  12.7    1.9e-19   69.2  12.7    1.4  1  zf-RING_4     RING/Ubox like zinc-binding domain
    5.2e-07   29.4   6.8    1.1e-06   28.4   6.8    1.6  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    3.4e-06   26.8   0.0    1.2e-05   25.0   0.0    2.1  1  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    0.00028   20.3   3.1    0.00028   20.3   3.1    3.1  3  Rtf2          Rtf2 RING-finger
     0.0004   20.6   9.4    0.00078   19.7   9.4    1.5  1  zf-RING_2     Ring finger domain
     0.0015   18.3   8.7      0.024   14.5   4.1    2.4  2  Prok-RING_4   Prokaryotic RING finger family 4
     0.0099   15.8   9.2       0.02   14.9   9.2    1.5  1  zf-RING_5     zinc-RING finger domain
  ------ inclusion threshold ------
      0.028   14.5   3.2      0.062   13.4   3.2    1.6  1  zf-UDP        Zinc-binding RING-finger
       0.03   14.2   6.4      0.077   12.9   6.4    1.6  1  Baculo_IE-1   Baculovirus immediate-early protein (IE-0)
       0.07   13.8   0.1       0.64   10.7   0.1    2.8  1  EST1          Telomerase activating protein Est1
      0.075   12.7   0.0       0.17   11.5   0.0    1.5  1  SET_assoc     Histone lysine methyltransferase SET associated
      0.094   12.7   0.0       0.24   11.4   0.0    1.7  1  Nup35_RRM_2   Nup53/35/40-type RNA recognition motif
       0.22   11.7   3.5       0.57   10.3   3.5    1.6  1  FYVE          FYVE zinc finger
       0.29   11.0  10.4       0.69    9.8  10.4    1.7  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
        4.6    7.4   7.3        5.2    7.2   5.6    2.0  2  zf-RING_UBOX  RING-type zinc-finger
          8    6.4   9.4         16    5.4   9.4    1.5  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2  12.7   1.7e-22   1.9e-19       1      48 []      15      62 ..      15      62 .. 0.99

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 1.7e-22
   zf-RING_4  1 cplCdeeldetdkdlkpCeCgyqiClfCyhrileeeegrCPaCreeYk 48
                cplC+ee+d +dk++ pC+CgyqiC+fCy++i+++ +g CPaCr++Y+
  KHJ33462.1 15 CPLCVEEFDLSDKNFWPCPCGYQICQFCYNNIKNNINGLCPACRRPYD 62
                9**********************************************7 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   6.8   9.9e-10   1.1e-06       2      49 ..      12      63 ..      11      64 .. 0.90

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 9.9e-10
                GSB-TTTSSS....BS-EEETTEEEEEE-HHHHHHHHH.TT-B-TTT--B--E CS
  zf-C3HC4_3  2 deeCviCler....prnvvllpCgHlvlCeeCaekllk.rkkkCpiCrrpiek 49
                +e C++C e+    ++n+  +pCg++ +C+ C +++++  +  Cp Crrp+++
  KHJ33462.1 12 EESCPLCVEEfdlsDKNFWPCPCGYQ-ICQFCYNNIKNnINGLCPACRRPYDE 63
                689******666669***********.*********99999*********986 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   1.1e-08   1.2e-05      16      69 ..     143     201 ..     122     202 .. 0.83

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 1.1e-08
                 HHHHHTTSCEEEEEEEEE.....TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  16 kelFskfGpiksiklvrd.....etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 +++F+++G+i++i ++++     +tg      +V+F+ kedA+++++a+ng + g+r l
  KHJ33462.1 143 EKYFGQYGKIVKIVVSNKrqgdsSTGGQSLGVYVTFARKEDAARCIAAVNGSQNGDRIL 201
                 579***************96666555555568*******************99888866 PP

>> Rtf2  Rtf2 RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   3.1   2.5e-07   0.00028     117     207 ..      15     108 ..       5     137 .. 0.80
   2 ?   -3.0   0.3       3.4   3.8e+03     192     203 ..    1016    1028 ..     993    1066 .. 0.58
   3 ?   -1.4   3.4       1.1   1.2e+03     178     236 ..    1112    1152 ..    1082    1178 .. 0.39

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 2.5e-07
        Rtf2 117 CpltglemngktkfvalrkCGcVfsekalkevk...sevClvCgkeykeedviplnptkeelellkarleeekakkkkkkkakkkkkakakgsk 207
                 Cpl   e++   k +   +CG  + +    ++k   +  C+ C  +y+e+++     t ee ++ ka+++++++kk+++++++++k + ++ + 
  KHJ33462.1  15 CPLCVEEFDLSDKNFWPCPCGYQICQFCYNNIKnniNGLCPACRRPYDEKNIEWKVVTPEEIAQFKANVQKNAKKKQEQRQKEAQKREVESMNR 108
                 *********************776666666666333666*************88888999*********9988777766665555555444443 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.4
        Rtf2  192 kkkakkk.kkaka 203 
                  k+++kk+ +++k+
  KHJ33462.1 1016 KSSQKKQrQAQKE 1028
                  2222211011111 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 1.1
        Rtf2  178 lkarleeekakkkkkkkakkkkkakakgskaeaeaaskssseasesskagkkkekkkek 236 
                  ++ +++++++ +kk + +k ++ +++                   s++++++k++k+++
  KHJ33462.1 1112 VSSKMQKKALDAKKISGEKIQSLTAT------------------DSASTENVKTEKEKE 1152
                  11112222222211111111111111..................112222222222222 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   9.4     7e-07   0.00078       2      44 .]      14      58 ..      13      58 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 7e-07
   zf-RING_2  2 eCpICleelssadsvl.llpCgHvfhreClerwlrssst..CPlCr 44
                +Cp+C ee++ +d+    +pCg+ +++ C ++ ++++++  CP+Cr
  KHJ33462.1 14 SCPLCVEEFDLSDKNFwPCPCGYQICQFCYNN-IKNNINglCPACR 58
                8********88888552459**********99.88888889****9 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.1    0.0097        11      25      42 ..       7      24 ..       4      29 .. 0.79
   2 !   14.5   4.1   2.2e-05     0.024      14      43 ..      32      64 ..      24      66 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0097
  Prok-RING_4 25 fdskdlssCPlCqrrisk 42
                 f ++d +sCPlC ++++ 
   KHJ33462.1  7 FIDEDEESCPLCVEEFDL 24
                 6678899*****999875 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 2.2e-05
  Prok-RING_4 14 epCgHlvCkeCfdskdls...sCPlCqrrisks 43
                  pCg  +C+ C+++ +++    CP C+r  +++
   KHJ33462.1 32 CPCGYQICQFCYNNIKNNingLCPACRRPYDEK 64
                 59*************9998899*****987665 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   9.2   1.8e-05      0.02       2      44 .]      15      59 ..      14      59 .. 0.95

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.8e-05
   zf-RING_5  2 CnkCfekl.skeekfyltsCgHifCekClkkll.ekeavCpiCrk 44
                C+ C e++  ++++f+  +Cg  +C+ C ++ + + +  Cp+Cr+
  KHJ33462.1 15 CPLCVEEFdLSDKNFWPCPCGYQICQFCYNNIKnNINGLCPACRR 59
                9*******999999*******************9*********95 PP

>> zf-UDP  Zinc-binding RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   3.2   5.6e-05     0.062       8      62 ..      12      63 ..       6      75 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 5.6e-05
      zf-UDP  8 gqiCqiCgddvgltedgelFvacnecafpvcrpcyeyerkdgnqsCPqCktrykr 62
                ++ C +C ++ +l++  + F  c  c++ +c+ cy+  + + n  CP C+  y  
  KHJ33462.1 12 EESCPLCVEEFDLSD--KNFWPC-PCGYQICQFCYNNIKNNINGLCPACRRPYDE 63
                667889999888865..458888.5*************************99976 PP

>> Baculo_IE-1  Baculovirus immediate-early protein (IE-0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   6.4   6.9e-05     0.077      81     135 ..      13      65 ..       5      70 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 6.9e-05
  Baculo_IE-1  81 yqcnicedtsa.eerflkPneccGykicnlcyanlwkfstvyPvcPvcktsfksss 135
                    c +c + +   ++ + P   cGy+ic+ cy n+ +  ++   cP c+  + +++
   KHJ33462.1  13 ESCPLCVEEFDlSDKNFWP-CPCGYQICQFCYNNIKN--NINGLCPACRRPYDEKN 65 
                  5688887765314444445.359***********975..78899****99987765 PP

>> EST1  Telomerase activating protein Est1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00057      0.64       6      50 ..      67     112 ..      64     290 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00057
                 HHHHTHHHHHHHHHHHHHHHH----.---H.HHHHHHHHHHHHHHH CS
        EST1   6 lWrkvyyevikllkkqlknldsapk.kkkkpvekrklklklvkflk 50 
                  W++v  e i  +k+ ++++ ++++ +++k ++kr+++++ +k+l 
  KHJ33462.1  67 EWKVVTPEEIAQFKANVQKNAKKKQeQRQKEAQKREVESMNRKHLS 112
                 5*******************98888889999************996 PP

>> SET_assoc  Histone lysine methyltransferase SET associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00016      0.17      35      57 ..     173     195 ..     170     201 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00016
   SET_assoc  35 GyYivFndskeAerCfraedgtk 57 
                 G Y++F+ +++A rC  a++g++
  KHJ33462.1 173 GVYVTFARKEDAARCIAAVNGSQ 195
                 99*****************9976 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00021      0.24       7      51 ..     129     186 ..     127     188 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00021
  Nup35_RRM_2   7 sGydtelielVle...hFasfGeIvkhyvp..........kevsvmyvkfesekdaek 51 
                  sG++  +i   l+   +F ++G+Ivk+ v+          +++  +yv+f+ + da++
   KHJ33462.1 129 SGIPEQEILSTLRgekYFGQYGKIVKIVVSnkrqgdsstgGQSLGVYVTFARKEDAAR 186
                  5667777766666788***********************7667779*******99986 PP

>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   3.5   0.00051      0.57       6      48 ..       9      84 ..       6     109 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00051
                ..--SB-TTT--B--SSS--EE-TTT--EE-STTS-EEE.EE.................................G CS
        FYVE  6 dsevkkCeiCakkFsllrrrhhCrlCGkvvCekCssklvall.................................e 48
                d++ ++C+ C ++F l+ +      CG  +C+ C ++  +++                                 +
  KHJ33462.1  9 DEDEESCPLCVEEFDLSDKNFWPCPCGYQICQFCYNNIKNNInglcpacrrpydekniewkvvtpeeiaqfkanvQ 84
                677899**************9999***********99887776666666666666555555555555555555540 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8  10.4   0.00062      0.69       1      41 []      15      57 ..      15      57 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00062
                -TTT-S--SS-E....E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4  1 CpiCleeakepn...elleCkHsfCskCirkilksrkkvkCPlC 41
                Cp+C ee+   +    + +C+ ++C+ C+ +i + + +  CP C
  KHJ33462.1 15 CPLCVEEFDLSDknfWPCPCGYQICQFCYNNIKN-NINGLCPAC 57
                *******9877777899*****************.66666**** PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   5.6    0.0046       5.2       1      29 [.      15      45 ..      15      55 .. 0.79
   2 ?   -1.6   0.1       2.6     3e+03       1       9 [.      54      62 ..      54      73 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0046
  zf-RING_UBOX  1 CpIClelft......dPlvlpCGHtFCreClwels 29
                  Cp C e+f+       P   pCG  +C+ C     
    KHJ33462.1 15 CPLCVEEFDlsdknfWP-C-PCGYQICQFCYN--N 45
                  ***********988877.4.8*********93..3 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.6
  zf-RING_UBOX  1 CpIClelft 9 
                  Cp C+ +++
    KHJ33462.1 54 CPACRRPYD 62
                  ******998 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   9.4     0.014        16       2      40 .]      15      57 ..      14      57 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.014
  zf-C3HC4_2  2 CpiCldmlkdpsvvt....pCgHvfCqkCilrsLeekn.eCPlC 40
                Cp+C++++    + +    pCg + Cq C     ++ n  CP C
  KHJ33462.1 15 CPLCVEEFDLS-DKNfwpcPCGYQICQFCYNNIKNNINgLCPAC 57
                ******99875.3334778*************8777778***** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1460 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1503  (0.0838307); expected 358.6 (0.02)
Passed bias filter:                      560  (0.0312343); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 1.01u 0.29s 00:00:01.30 Elapsed: 00:00:00.49
# Mc/sec: 8951.39
//
Query:       KHJ33463.1  [L=484]
Description: putative proteasome regulatory particle subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-55  186.4   0.6    6.3e-55  185.5   0.6    1.5  1  RPN7      26S proteasome subunit RPN7
    1.4e-13   51.3   0.0    3.2e-13   50.1   0.0    1.6  1  PCI       PCI domain
  ------ inclusion threshold ------
        3.5    8.0   5.1        5.6    7.3   0.4    3.2  2  TPR_2     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.5   0.6   1.1e-58   6.3e-55       1     174 []     101     274 ..     101     274 .. 0.99

  Alignments for each domain:
  == domain 1  score: 185.5 bits;  conditional E-value: 1.1e-58
                 -HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHCT-HHHHHHHHHTCCCC--SHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHH CS
        RPN7   1 DekwveelrkknekeleeLdaelkdakenlgkeeirrakldlaehYlkigdleeAlkaysrireyctslkhkidmllnlirvaiffndwdlvskyleka 99 
                 De+++e+lrk+n++ le++++e ++a e+ g++e+++ak ++ae+ ++igd+e A+ ay++++e++  l+ kid++l++ir++if++d+ lv+k +++a
  KHJ33463.1 101 DEAFYEKLRKENDEALEKFKKEEEEAAEKAGDTEVQAAKGQRAEYLAMIGDKERAITAYEELFEKTGILGTKIDIVLAIIRMGIFYGDKLLVKKLIDRA 199
                 899************************************************************************************************ PP

                 HCSSS---.HHHHHHHHHHHHHHHHHTT-HHHHHHHHCTS-GGGT.TTT--HHHHHHHHHHHHHHH--HHHHHHH CS
        RPN7 100 kellekggdwerknrlkvyeGlallairkfkeAaellldilstftskellsyedlavyavlcalatldRkdLkak 174
                 k l+e+ggdw+r+nrlk+y+Gl+ll+ir+++  a llld+lstfts+el+sy+ l++y+vl++ ++l+R d+k+k
  KHJ33463.1 200 KILVESGGDWDRRNRLKAYQGLHLLTIRQYEASAPLLLDSLSTFTSYELCSYSSLVIYSVLVGSVSLKRGDFKSK 274
                 ************************************************************************986 PP

>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.0   5.4e-17   3.2e-13       2      99 ..     341     439 ..     340     445 .. 0.93

  Alignments for each domain:
  == domain 1  score: 50.1 bits;  conditional E-value: 5.4e-17
                 HHHHHHHHHHHTSHHHHHHHHHHHHHHHH.HHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTTT CS
         PCI   2 sysdllkalrsgnlsgfseelkdleeell.addglaqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIrdgeirakidqesg 99 
                 ++  l+++l++g++++f  +l+++e  +l +d++l+++   +++++r+r+++q+ ++y+ + le++a+ +++sv+ +++ l+k+I+ ++i ++id+++g
  KHJ33463.1 341 PFAKLVRSLYTGSYQSFFGALAEVETGFLrQDRYLYEHHGWFVREMRLRAYQQLLQSYRVVGLESMANDFGVSVEFLDNDLAKFIAAQRIPCTIDRVNG 439
                 6789********************776662577899*************************************************************98 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.4      0.14   8.1e+02      12      26 ..     107     121 ..      97     122 .. 0.74
   2 ?    7.3   0.4   0.00093       5.6       6      29 ..     141     164 ..     137     166 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.14
       TPR_2  12 yklgdyeeAleafek 26 
                   +++ +eAle f+k
  KHJ33463.1 107 KLRKENDEALEKFKK 121
                 4566779****9997 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.00093
       TPR_2   6 nlGlayyklgdyeeAleafekAle 29 
                 ++++ ++  gd e+A+ a+e+  e
  KHJ33463.1 141 QRAEYLAMIGDKERAITAYEELFE 164
                 589999**************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1035  (0.0577277); expected 358.6 (0.02)
Passed bias filter:                      646  (0.036031); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 3524.47
//
Query:       KHJ33464.1  [L=561]
Description: putative mfs monocarboxylic acid transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.8e-15   56.1  23.8    2.8e-15   56.1  23.8    2.3  2  MFS_1         Major Facilitator Superfamily
    2.1e-09   37.3   7.0    2.1e-09   37.3   7.0    1.9  2  Nodulin-like  Nodulin-like


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.1  23.8   3.1e-19   2.8e-15       1     343 [.      42     483 ..      42     484 .. 0.79
   2 !    2.4  15.2    0.0067        60      91     219 ..     412     544 ..     404     555 .. 0.61

  Alignments for each domain:
  == domain 1  score: 56.1 bits;  conditional E-value: 3.1e-19
       MFS_1   1 lllaaflsalarsilgpalpl.alaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllf.....ass......... 84 
                 l+ a+f s +a si +++l   +l++ l ++ +++++++ +  ++ ++++ ++G+l dr+ +  + l ++++f+lg  +++f     a +         
  KHJ33464.1  42 LFSAVFSSLCAGSISTFSLYGhLLQTRLKYTQTQVNTVALAAQITLCLSVSFIGYLCDRVQPAFISLSSAITFGLGYSVAAFtykygA-Nsvyeniqps 139
                 6889999999999999999999**************************************9999************555556334441.2355556666 PP

       MFS_1  85 ...lwlllvlrvlqGlgagalfpagaaliadwfpk.eergraigllsagfslGailgpllggllasslg..........Wravfyilaivsllafvlfl 169
                    +w+++++ v+ Gl++ +++ + ++  a+ f   ++rg+a++   a+f+l+      +g+ l    +          + +  +++ ++++ + v f+
  KHJ33464.1 140 alsVWIMVIAFVMIGLATTMMYLSTITTCAKNFRNdKHRGLALASPIAAFGLSGFWQSQIGSKLFIEHSlngkkgdvdvFKYFIFLAFLLTVAGTVGFF 238
                 77699******************************9********9999999999888777775553333469**9*99877666666666666666444 PP

       MFS_1 170 lllpeepperkrkspkeee......................................kgtgpaplvp.......awkallkdpvlwillialllfffgf 223
                 ll  +++ +   ++++++e                                      k        +           +++dp +w++ +++ll++   
  KHJ33464.1 239 LLRIVDENNLIDEATEQQErtrllgsnepsfnsrinynsrvdapnndemgnrskklsK----E---EmsrylnlKTATFVRDPTMWFFAVGFLLVSGTG 330
                 4444444444444444444799999999999999999999999999887755533321....2...244566667778888888999999999999999 PP

       MFS_1 224 sglltllplylqevlgls.......glllaglllallalvgailallagrlsdr............................lgrrrrlllalllllla 287
                  ++ t + +    +l++s       +  ++++ +++++l + +++l++g l d                             ++r  +l+ + lll+++
  KHJ33464.1 331 DAFITNMGTV-IGTLDFSsqdpnklS-TIVATQVSIVSLSSTAARLIFGSLTDIfapapslnfdhysvhssthhkfcpsnfsISRNVFLIGSALLLSAG 427
                 9999999996.************987.8999999********************888888887777777777777776664444444444444444444 PP

       MFS_1 288 alglallavtssavllllvlvliGfglgfvfpsllalasdlappeeagtasglfnt 343
                  + la   + ++   +++v+ +iGfg+g v++++  ++s + + e+ gt  g+++t
  KHJ33464.1 428 QVVLAAGFAQNHMNRFWIVSTFIGFGYGAVYTLSPLIVSIVWGVENFGTNWGIITT 483
                 4444444444888888889*******************999999999999999886 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.0067
       MFS_1  91 lrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg......Wravfyilaivsllafv.lfllllpeepperkrk 182
                 +r +  +g+++l++ag++++a+ f++ +++  + ++s+++++G+   + l++l++s ++        +  +  ++v+++af+ l++  ++e   + ++ 
  KHJ33464.1 412 SRNVFLIGSALLLSAGQVVLAAGFAQ-NHMNRFWIVSTFIGFGYGAVYTLSPLIVSIVWgvenfgTNWGIITTTPVLCIAFWdLIYSKIYEAGARASNY 509
                 55555678888888888888888888.666666688888888888888888888766666777778888888888888886654333333333332222 PP

       MFS_1 183 spkeeekgtgpaplvpawkallkdpvlw....illialllf 219
                 +++      +  +++  +++ + +  +w    ++++a++l+
  KHJ33464.1 510 EHQS-----EYDEILC-YGKSCYSTTFWamavSVWVACALW 544
                 2222.....2333333.444444444555554444444444 PP

>> Nodulin-like  Nodulin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   7.0   2.3e-13   2.1e-09       1     187 [.      38     246 ..      38     263 .. 0.76
   2 ?   -2.6   0.1      0.35   3.2e+03     144     149 ..     455     460 ..     426     501 .. 0.62

  Alignments for each domain:
  == domain 1  score: 37.3 bits;  conditional E-value: 2.3e-13
  Nodulin-like   1 rWlvlvaaiwiqsiaGanylFsaySsalKsslgisQkqlnlLavakdlGkalGl.lsGllaevlplwvvllvgaamglvGYgvvwL.......vvte 89 
                   r++ l++a++   +aG+ ++Fs+y + l + l + Q+q+n++a+a ++   l + + G+l++++ ++++ l +a++  +GY v  +       +v e
    KHJ33464.1  38 RYTALFSAVFSSLCAGSISTFSLYGHLLQTRLKYTQTQVNTVALAAQITLCLSVsFIGYLCDRVQPAFISLSSAITFGLGYSVAAFtykyganSVYE 134
                   5788999*****************************************999988357******************999***9875512222224666 PP

  Nodulin-like  90 sia..klpywllfllillaanseawlnTaslvtcirnFpes..rgvvvgllkgyaGlsaaiytqlyeailgs..........daksllllvalvplv 172
                   +i+  +l +w ++++ ++ + +++ +  +++ tc +nF++   rg++++   +  Gls+   +q+ + ++ +          d  ++ +++a++ +v
    KHJ33464.1 135 NIQpsALSVWIMVIAFVMIGLATTMMYLSTITTCAKNFRNDkhRGLALASPIAAFGLSGFWQSQIGSKLFIEhslngkkgdvDVFKYFIFLAFLLTV 231
                   66433699******************************98622566666666778***998888766543332355556666666788888888877 PP

  Nodulin-like 173 vslvvlylvrevekl 187
                      v  +l+r v++ 
    KHJ33464.1 232 AGTVGFFLLRIVDEN 246
                   766666666666654 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.35
  Nodulin-like 144 aaiytq 149
                   +a+yt 
    KHJ33464.1 455 GAVYTL 460
                   333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (561 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       752  (0.0419432); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 4168.72
//
Query:       KHJ33465.1  [L=1863]
Description: putative ubiquitin-protein ligase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-74  251.3   0.0    3.2e-74  250.2   0.0    1.6  1  HECT      HECT-domain (ubiquitin-transferase)
  ------ inclusion threshold ------
        3.3    7.9   8.5         85    3.4   0.0    5.4  6  Arm       Armadillo/beta-catenin-like repeat


Domain annotation for each model (and alignments):
>> HECT  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  250.2   0.0   3.5e-78   3.2e-74       2     307 .]    1515    1863 .]    1514    1863 .] 0.91

  Alignments for each domain:
  == domain 1  score: 250.2 bits;  conditional E-value: 3.5e-78
                  HHHHHHT-GGGSSE........EESSTTSSSEEE-TTHHHHS............HHHHHHHHHHHHHTT--BSS-B-HHHHHHHTT..-.---TCHH CS
                  xxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxx RF
        HECT    2 llskelldpklglf........eeesedsgtlypkpssseee........llklfeflGkvlGkaiyeeilldlpfsraflkfllg..eekitledl 80  
                   +ske+ ++kl+l+        +e +  ++ l p p+s+e +         l+lf++lGk++++++++++++d++f++ f++       +  +l  +
  KHJ33465.1 1515 TVSKEFSKKKLKLWretdcnntDEFAFGARGLFPAPMSEE-QattengkrILHLFKMLGKFVARSMIDSRIIDVSFNPTFFRIGDAskAVSPSLGAV 1610
                  5789999999999955554444333334444555555444.169999*997799***************************986554455677889* PP

                  HHH-HHHHHHHHHHH..HS-GGG............................GT-BSEEEEETTEEEEEESSTTGGGSB--TTTHHHHHHHHHHHHHT CS
                  xxxxxxxxxxxxxxxxxxxxxxx.........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT   81 eeidpelakslkellslesntee.........................vedlaLtFtipenagasatieLipnGanipVtnenkkeYiklyvnyllk 152 
                  + +dp+lakslk ++++ + +++                         ++dl+L+Ft+p   g+s +ieL++nG++++V  + ++eY++++++++l 
  KHJ33465.1 1611 KTVDPQLAKSLKLIKKFVTGKKAidenpnltpaqkvreaeqlrvdgarIDDLGLDFTLP---GYS-SIELLSNGSQVSVSIDRVEEYLNKVIDMTLG 1703
                  *****************999998************************************...***.******************************* PP

                  GGGHHHHHHHHHHHHTTS-HHHHTTS-HHHHHHHHBCSSS.--HHHHHHTEEEETT--TTSHHHHHHHHHHHHS-HHHHHHHHHHHHSSSS--TTCG CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT  153 ksvekqleaflkGfsevipskalklfdaeelellisGedelidvedlrrnteykggynaesetiewlweilkefspeekrlfLqFvTgssrlPlgGf 249 
                   +v++q++af+ Gf++v+p +al++f+++el +l+   +e++++e+l++ +++++g+n +s+ i++l++ ++e++   +r+fLqF+Tgs++lP+gGf
  KHJ33465.1 1704 SGVQRQINAFRTGFTQVFPYSALSAFTPDELVMLFGRVEEDWSLETLMDSIKADHGFNMDSKSIKNLLQTMSELDLTARREFLQFTTGSPKLPIGGF 1800
                  *********************************9966666********************************************************* PP

                  GG-B--EEEEE-S......-TTS--EEEGGGTEEEE---SSHHHHHHHHHHHHHHH.H--XXX CS
                  xxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxx RF
        HECT  250 aelhpkftierksk....edetrLPtahTCfnlLklpdYsskeilkekLltAieet.egFels 307 
                  ++l+p ft++rk +    +++++LP+++TC+n+LklpdY++ e+++e+++tAi+e+   F+ls
  KHJ33465.1 1801 KSLTPMFTVVRKPSeppyTSDDYLPSVMTCVNYLKLPDYTNLEVMRERMTTAIREGqGAFHLS 1863
                  ***********999999999************************************5559986 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.1     0.077   6.9e+02      14      39 ..     300     330 ..     299     332 .. 0.82
   2 ?   -0.2   0.0      0.13   1.2e+03      12      40 ..     345     374 ..     345     375 .. 0.80
   3 ?    3.3   0.0      0.01        90       5      41 .]     378     414 ..     374     414 .. 0.89
   4 ?    3.4   0.0    0.0094        85       8      31 ..     423     445 ..     421     445 .. 0.87
   5 ?   -1.6   0.1      0.35   3.1e+03      18      33 ..     653     668 ..     644     668 .. 0.83
   6 ?   -1.3   0.0      0.28   2.5e+03       8      29 ..     902     923 ..     899     926 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.077
                 HHHHHHHTT.....TSSHHHHHHHHHHHHHH CS
         Arm  14 vppLvrLLs.....sedeevqeeAawALsNL 39 
                 v+ Lv+LL+      e++e+   A+++++NL
  KHJ33465.1 300 VKELVTLLQpseldEENTEMMLLACRCIANL 330
                 6779999999988888888888899999998 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.13
                 THHHHHHHHTT.TSSHHHHHHHHHHHHHHT CS
         Arm  12 GavppLvrLLs.sedeevqeeAawALsNLa 40 
                 Gavp+L++ L      ++ e+A+++L  ++
  KHJ33465.1 345 GAVPVLCQKLLeIHFIDLAEQALSTLEKIS 374
                 899999986666999999999999997665 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.01
                 HHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm   5 kdavieaGavppLvrLLssedeevqeeAawALsNLaa 41 
                    +++ G++ + ++ L+   +++q+ A+++ +N ++
  KHJ33465.1 378 PASIVREGGLTACLTYLDFFATSTQRTAVTTAANCCR 414
                 56689999**************************997 PP

  == domain 4  score: 3.4 bits;  conditional E-value: 0.0094
                 HHHTTHHHHHHHHTTTSSHHHHHH CS
         Arm   8 vieaGavppLvrLLssedeevqee 31 
                 vi+  ++p+L++ L s d++v+e+
  KHJ33465.1 423 VIRD-VMPILLNVLGSNDQKVVEQ 445
                 5555.89**************996 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 0.35
                 HHHTTTSSHHHHHHHH CS
         Arm  18 vrLLssedeevqeeAa 33 
                 +++Ls+ dee++ eA+
  KHJ33465.1 653 LKMLSNLDEEILIEAL 668
                 68999******99986 PP

  == domain 6  score: -1.3 bits;  conditional E-value: 0.28
                 HHHTTHHHHHHHHTTTSSHHHH CS
         Arm   8 vieaGavppLvrLLssedeevq 29 
                 + ++ +v++L++  +++de++ 
  KHJ33465.1 902 LLNSEIVRVLLDVFNNKDERLS 923
                 678999**********999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1863 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       652  (0.0363657); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.97u 0.31s 00:00:01.28 Elapsed: 00:00:00.49
# Mc/sec: 11467.33
//
Query:       KHJ33466.1  [L=554]
Description: putative smr domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-08   34.5   5.4    4.3e-08   33.4   5.4    1.6  1  DUF1771    Domain of unknown function (DUF1771)
    3.4e-06   26.7   2.6      9e-06   25.3   0.1    2.7  3  CUE        CUE domain
     0.0012   19.1   0.0     0.0034   17.7   0.0    1.8  1  Smr        Smr domain
     0.0051   16.4   2.0      0.014   14.9   2.0    1.8  1  4HB_MCP_1  Four helix bundle sensory module for signal transd
  ------ inclusion threshold ------
      0.059   13.0   0.0       0.14   11.7   0.0    1.6  1  DMA        DMRTA motif
       0.14   12.2   0.0       0.83    9.7   0.0    2.1  2  DUF498     Protein of unknown function (DUF498/DUF598)


Domain annotation for each model (and alignments):
>> DUF1771  Domain of unknown function (DUF1771)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   5.4   1.5e-11   4.3e-08       4      61 ..     390     452 ..     388     454 .. 0.93

  Alignments for each domain:
  == domain 1  score: 33.4 bits;  conditional E-value: 1.5e-11
     DUF1771   4 lRaeAdeharkrnelfekAaeAyrrGd.....gaaAkelseqGkehgekmeeanreAaeaIfe 61 
                 l ++   +++ r+++f+kA++AyrrG+      a A +++e+G+ ++ ++++    Aa+ I+ 
  KHJ33466.1 390 LKDQMTNLYESRDNAFAKASAAYRRGKsdrlmTAVATHYAEEGHSYNTQAKKVQSDAADLIAA 452
                 567778899**************************************************9976 PP

>> CUE  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       1.5   4.6e+03      14      28 ..      20      34 ..      20      34 .. 0.87
   2 !   25.3   0.1     3e-09     9e-06       6      38 ..     147     179 ..     143     182 .. 0.93
   3 ?   -0.2   0.0      0.29   8.6e+02       7      30 ..     301     324 ..     297     325 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.5
                TS-HHHHHHHHHHCT CS
         CUE 14 dldeevIravLrasn 28
                ++d++++ a L++++
  KHJ33466.1 20 SIDDSIVLAILSDYD 34
                5899*******9986 PP

  == domain 2  score: 25.3 bits;  conditional E-value: 3e-09
                 HHHHHHSTTS-HHHHHHHHHHCTTTHHHHHHHH CS
         CUE   6 etLkemFPdldeevIravLrasngnvEatinaL 38 
                 +tL  mFP l++ +I++ L+  ngn++ +i+ L
  KHJ33466.1 147 NTLIAMFPALEVFDIKYTLQKFNGNLDKAIDEL 179
                 799***************************987 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.29
                 HHHHHSTTS-HHHHHHHHHHCTTT CS
         CUE   7 tLkemFPdldeevIravLrasngn 30 
                 +L e FP+++  +Ir+ + ++++n
  KHJ33466.1 301 QLVEDFPSVSMLQIRKIYNSTQNN 324
                 66666*****99****99999988 PP

>> Smr  Smr domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.1e-06    0.0034       1      56 [.     460     533 ..     460     546 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.1e-06
                 EE-TT--HHHHHHHHHHHHHH................HHHTT-SEEEEE--STTSTT..HCHHHHHHHHHHHCS CS
         Smr   1 lDLhglrraealnvletflda................asakglrsvevihGkGahag..vgvLrpavmgwLagk 56 
                 lDLh l++++a ++ ++++                   s+    s ++i G+G+h++    +L pav ++L++ 
  KHJ33466.1 460 LDLHSLSVKDAVRIAREYVTTwwhelderasfennlkYSRDCSPSYKIIIGTGTHSKngISKLGPAVSKMLQRD 533
                 8********************888888887777776544456899**********7756999*********987 PP

>> 4HB_MCP_1  Four helix bundle sensory module for signal transduction
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   2.0   4.8e-06     0.014      42     136 ..     308     412 ..     293     455 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 4.8e-06
   4HB_MCP_1  42 edrllpikdlgeikanlrelradlleliltkdkae..........kdellkdieeleaeidkllekyektilteeEkelleefkeqlnaYrevrkkvle 130
                 + ++l+i+ + + ++n+  + +dll+ ++t+dk++          ++ +  ++e+++a +dk+ + + +++l ++  + + ++k+q+++ +e+r+++ +
  KHJ33466.1 308 SVSMLQIRKIYNSTQNNFSYSRDLLQALITSDKQQtpsgiqisflHNPISLNTERNNACVDKQKALITNSYLRKNGPQTVHNLKDQMTNLYESRDNAFA 406
                 667899**************************************99*************************************************9998 PP

   4HB_MCP_1 131 lakegk 136
                  a +  
  KHJ33466.1 407 KASAAY 412
                 876543 PP

>> DMA  DMRTA motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   4.8e-05      0.14       6      36 ..     148     178 ..     146     179 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.8e-05
         DMA   6 iLarvFPnhkrsvLelvLqrCkGDVvqAIEq 36 
                 +L+  FP  +  +++ +Lq ++G++ +AI+ 
  KHJ33466.1 148 TLIAMFPALEVFDIKYTLQKFNGNLDKAIDE 178
                 68888************************97 PP

>> DUF498  Protein of unknown function (DUF498/DUF598)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.56   1.7e+03      12      45 ..      76     113 ..      67     142 .. 0.66
   2 ?    9.7   0.0   0.00028      0.83       3      85 ..     454     540 ..     453     543 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.56
                 TTEEESSEEEE-SSSEEE-T...HCS.TTCEE.CHHHHH CS
      DUF498  12 ngvkysgsllvlpeeafawd...vak.aedlt.eeslel 45 
                 ++ +++++++ + e++ +w+   +a+ ++ ++ +e+++ 
  KHJ33466.1  76 GQIRVREDCAAT-ESLQDWNtqtAASsSSSISpDENIKC 113
                 556788999999.88999973321222333334444444 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00028
                 EEESSEEEETTEEESSEEEE-SSSEEE-THCS..TTCEECHHHHHHCT..T..SEEEEE-TTS....-----HHHHHHHHCCTSEEEEE CS
      DUF498   3 aygeggfelngvkysgsllvlpeeafawdvak..aedlteeslellellepkpellilGtGkr....qlplspevrealnelgigvevm 85 
                 +++ +++ l   +++ ++ +  e +++w+  +       e++l+     +p+   +i+GtG++    + +l p+v ++l++ g + ev 
  KHJ33466.1 454 QCSRNSLDLHSLSVKDAVRIAREYVTTWWH-EldERASFENNLKYSRDCSPSY-KIIIGTGTHskngISKLGPAVSKMLQRDGWKFEVS 540
                 578888888888999999999999999993.3223333377777776556644.5789***99988899999*************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       656  (0.0365888); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4226.97
//
Query:       KHJ33467.1  [L=196]
Description: hypothetical protein EV44_g1325 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.21s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1557.86
//
Query:       KHJ33468.1  [L=281]
Description: putative nadh-ubiquinone oxidoreductase kda subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.6e-44  149.7   0.0    8.2e-44  149.1   0.0    1.2  1  Complex1_30kDa  Respiratory-chain NADH dehydrogenase, 30 Kd s


Domain annotation for each model (and alignments):
>> Complex1_30kDa  Respiratory-chain NADH dehydrogenase, 30 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.1   0.0   4.6e-48   8.2e-44       2     121 ..     109     229 ..     108     230 .. 0.96

  Alignments for each domain:
  == domain 1  score: 149.1 bits;  conditional E-value: 4.6e-48
                     E--HHHHHHHHHHHHH...TT--EEEEEEEEETT..SSSEEEEEEEE--S-.-EEEEEE....-S-BEE--TTT-STHHHHHHHHHHHSHHBCTT CS
  Complex1_30kDa   2 vvepedllevakflkdeeelgfdvlsdltavDek..eerfevvyhllsleknerirvkvevdeeepevpSvtdlfpgadwyEREayDmfGivfeg 94 
                     +++p+ +++v +flk +++ +f++++d+tavD +  ++rfevvy+lls++ n rirvk+++de +p vpS+t+l+ ga+wyERE++D+fG+ f g
      KHJ33468.1 109 YISPSGVIPVFSFLKYNTAAEFTQVTDITAVDFPnrNQRFEVVYNLLSVRYNSRIRVKTYADELSP-VPSITSLYDGANWYEREVFDLFGVFFVG 202
                     789999**************************66679**********************9988788.**************************** PP

                     SSTSS-SSSSTTSSS-TTSTTS----- CS
  Complex1_30kDa  95 hpdlrrillpedfeghPLRkdfplsge 121
                     hpdlrri+++++f ghPLRkdfpl+g+
      KHJ33468.1 203 HPDLRRIMTDYGFDGHPLRKDFPLTGY 229
                     ************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       271  (0.0151152); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 2062.91
//
Query:       KHJ33469.1  [L=329]
Description: hypothetical protein EV44_g5892 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2460.15
//
Query:       KHJ33470.1  [L=342]
Description: putative deoxyribonuclease tatd [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-48  165.3   0.0      2e-48  165.0   0.0    1.1  1  TatD_DNase  TatD related DNase


Domain annotation for each model (and alignments):
>> TatD_DNase  TatD related DNase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.0   0.0   1.1e-52     2e-48      13     255 .]      41     340 ..      19     340 .. 0.89

  Alignments for each domain:
  == domain 1  score: 165.0 bits;  conditional E-value: 1.1e-52
                 TTTHHHHHHHHHHTTEEEEEEE-SSGGGHHHHHHHHTT.TTTEEEEE---GGGGGC.................C.CCHHHHHHHH.HHC.CCTSEEEEE CS
  TatD_DNase  13 eedreeileraeeagvaavvvvgtsskdskavlelakkypnkvyavlGiHPnevde.................asedlleelkel.anv.khskvvaiG 92 
                   d  +++ ra++ +  +++v+g++  +s+++++la++ypn +ya++G+HP+++++                 a    l++l  l +++ +   +va G
  KHJ33470.1  41 PPDLSSVITRAQRYNCDKLIVTGSDISSSQEAVRLAREYPNICYATVGVHPCSCTNftkgsspplsdpsssssAASVQLAQLSALaSSAkASGLAVAFG 139
                 55789999***********************************************************99887633333366766665563667899*** PP

                 EEEEET-CCCCCGHHHHHHHHHHHHHHHHHTTEEEEEEEES-HHHHHHHHHHCG.GCCSEEEETT--S-HHHHHHHHHTTEEEEE-GGGGTTTTHHHHH CS
  TatD_DNase  93 eiGLDyysreestkeaqeevFeeqlrlAkelklplviHlrkaeedlleilkeaa.eakakvvlHsfsgsaeeakkflklgyyislsglltfknakelre 190
                 eiGLDy + e   ke q e+Fe+ql++A +++lpl++H+r+a++d++++l++ + + ++++v+Hsf+gs  e+k+++++g++i+++g++ +  ++e  +
  KHJ33470.1 140 EIGLDYDRLELCSKEIQIEFFERQLSIAVQVQLPLFLHSRAAHTDFMRLLSSREtDLPLRGVVHSFTGSCVEMKELTSKGWHIGVNGCSLK--TSENCD 236
                 ******999999****************************************9756666****************************9888..7799** PP

                 HHHHS-GGGEEE---TTSSEE.......................................CCCTT.SE--GGGHHHHHHHHHHHHTS-HHHHHHHHHHH CS
  TatD_DNase 191 lvkavpldrlLiETDaPyltp.......................................kpyrg.krnepanvayvveklaelkaltleelaeitaeN 249
                 +v+a+pl+ l +ETD P+++                                        +      rnep+++ +v+ ++a++k+l+++ + e+++eN
  KHJ33470.1 237 VVRAIPLQYLHLETDGPWCEIrpshagaqvlsgiqekilvedgvqisdslkwmkkekwqdDCC-VkGRNEPCTISKVAWAVAAIKGLDIKVVVEAAWEN 334
                 *******************9999***************************9998887753222.348******************************** PP

                 HHHHHH CS
  TatD_DNase 250 akrlfk 255
                 ++++f+
  KHJ33470.1 335 SLKMFQ 340
                 ***995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2460.66
//
Query:       KHJ33471.1  [L=247]
Description: putative regulatory protein cys-3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-11   44.1  11.8    1.6e-11   44.1  11.8    1.7  2  bZIP_2     Basic region leucine zipper
     0.0049   16.9   9.8     0.0049   16.9   9.8    1.8  2  bZIP_1     bZIP transcription factor
  ------ inclusion threshold ------
      0.018   14.9   1.0      0.051   13.5   1.0    1.8  1  GIT_CC     GIT coiled-coil Rho guanine nucleotide exchange fa
      0.037   12.6   5.4      0.042   12.4   5.4    1.1  1  LCD1       DNA damage checkpoint protein
      0.049   14.0   0.2       0.11   12.8   0.2    1.6  1  TSC22      TSC-22/dip/bun family
       0.32   11.0   4.3       0.35   10.9   3.0    1.9  1  DUF2205    Short coiled-coil protein
       0.55   10.5   7.2       0.13   12.4   3.2    2.1  2  XhlA       Haemolysin XhlA
       0.75   10.0   7.6          2    8.6   7.6    1.8  1  Fib_alpha  Fibrinogen alpha/beta chain family


Domain annotation for each model (and alignments):
>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.1  11.8   7.3e-15   1.6e-11       3      54 .]     147     198 ..     145     198 .. 0.96
   2 ?   -3.7   0.0       5.8   1.3e+04      46      53 ..     217     224 ..     214     225 .. 0.57

  Alignments for each domain:
  == domain 1  score: 44.1 bits;  conditional E-value: 7.3e-15
                 XXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2   3 deyrerRrkNreAarrsRekkkakeeeleervkeLeeeNaqLrqkveqLeke 54 
                 ++++++Rr+N++A++r+R kkk++e+ le+ +ke++ + a+L+  +++Le+e
  KHJ33471.1 147 SAEEDKRRRNTAASARFRVKKKQREQALEKSAKEMSDKVAKLESHIKMLETE 198
                 5789**********************************************98 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 5.8
                 HHHHHHHH CS
      bZIP_2  46 qkveqLek 53 
                 +kv++L++
  KHJ33471.1 217 DKVKTLTQ 224
                 55666655 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   9.8   2.2e-06    0.0049       7      62 ..     150     205 ..     145     207 .. 0.93
   2 ?   -2.2   0.2       2.1   4.7e+03      36      40 ..     220     224 ..     216     237 .. 0.44

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 2.2e-06
                 XXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   7 ekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekLksk 62 
                 e ++ +N  a +r+R +K+++ ++Le+ +k+++ + ++L s ++ l+ e++ Lk+ 
  KHJ33471.1 150 EDKRRRNTAASARFRVKKKQREQALEKSAKEMSDKVAKLESHIKMLETENKWLKDL 205
                 558899*********************************************99975 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 2.1
                 HHHHH CS
      bZIP_1  36 kaLek 40 
                 k+L++
  KHJ33471.1 220 KTLTQ 224
                 44443 PP

>> GIT_CC  GIT coiled-coil Rho guanine nucleotide exchange factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   1.0   2.3e-05     0.051      31      65 ..     170     204 ..     165     205 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.3e-05
      GIT_CC  31 kiqqLlkvNtslsdelrlLQskvqkLqaeNaqlrd 65 
                 + q+L k+ +++sd++++L s ++ L++eN+ l+d
  KHJ33471.1 170 REQALEKSAKEMSDKVAKLESHIKMLETENKWLKD 204
                 6689**************************98875 PP

>> LCD1  DNA damage checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   5.4   1.9e-05     0.042      17      85 ..     167     238 ..      95     246 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.9e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHTTTTTT..HHHH------TT-.--SSS--THH CS
        LCD1  17 leklknskkqlkesheeelekLkkevqkleDekkFlenElrslset..ksqaskksaeedt.dnsssvskKk 85 
                 ++++++  ++  ++++++++kL++ ++ le+e+k l+  + ++++   +++++k+ ++ ++ ++++s+++K+
  KHJ33471.1 167 KKQREQALEKSAKEMSDKVAKLESHIKMLETENKWLKDLITDKNQHwlREDKVKTLTQWKHqKQKLSSEQKR 238
                 77888888999999***********************99999999876455555555444404444444555 PP

>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   5.1e-05      0.11      21      46 ..     183     208 ..     178     218 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 5.1e-05
       TSC22  21 ekIkeLeernseleeENslLkalasp 46 
                 +k++ Le++++ le+EN+ Lk l++ 
  KHJ33471.1 183 DKVAKLESHIKMLETENKWLKDLITD 208
                 68999****************99986 PP

>> DUF2205  Short coiled-coil protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   3.0   0.00016      0.35      19      62 ..     165     208 ..     141     224 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00016
     DUF2205  19 erLqqqakeLqssLqaLaervdeVkeehdKLesenrfLqqYIgd 62 
                  + +q+ ++L +s ++++++v +  +  + Le+en+ L + I d
  KHJ33471.1 165 VKKKQREQALEKSAKEMSDKVAKLESHIKMLETENKWLKDLITD 208
                 233457899***************999999*********99875 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       3.3   7.3e+03      19      34 ..     139     154 ..     136     158 .. 0.59
   2 ?   12.4   3.2     6e-05      0.13      19      56 ..     170     207 ..     164     208 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3.3
        XhlA  19 rvdkleekaaeaeeki 34 
                 +++++ + +ae +++ 
  KHJ33471.1 139 DINEISRQSAEEDKRR 154
                 4666666666666555 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 6e-05
        XhlA  19 rvdkleekaaeaeekiknleedlkklesnqkWlirtii 56 
                 r + le+ a e+  k+  le  +k le  +kWl+ +i+
  KHJ33471.1 170 REQALEKSAKEMSDKVAKLESHIKMLETENKWLKDLIT 207
                 4468*****************************98875 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   7.6   0.00089         2      43     117 ..     139     212 ..     137     237 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00089
                 CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHH CS
   Fib_alpha  43 eleeisnstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesneqk 117
                 +++eis+++ e ++  +++  s r + k+k+  +++++ks+ke+ +++++l+  i+  e++ + L++++ +++q+
  KHJ33471.1 139 DINEISRQSAEEDKRRRNTAASARFRVKKKQ-REQALEKSAKEMSDKVAKLESHIKMLETENKWLKDLITDKNQH 212
                 57899999999999********999999999.699********************************99988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2455  (0.136929); expected 358.6 (0.02)
Passed bias filter:                      665  (0.0370907); expected 358.6 (0.02)
Passed Vit filter:                        95  (0.00529868); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.52u 0.19s 00:00:00.71 Elapsed: 00:00:00.36
# Mc/sec: 2049.38
//
Query:       KHJ33472.1  [L=254]
Description: hypothetical protein EV44_g5441 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1850.86
//
Query:       KHJ33473.1  [L=161]
Description: putative family transcriptional regulator protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-54  184.8   0.1    1.3e-54  184.7   0.1    1.0  1  DUF1993   Domain of unknown function (DUF1993)


Domain annotation for each model (and alignments):
>> DUF1993  Domain of unknown function (DUF1993)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.7   0.1   7.2e-59   1.3e-54       1     161 []       4     160 ..       4     160 .. 0.97

  Alignments for each domain:
  == domain 1  score: 184.7 bits;  conditional E-value: 7.2e-59
                 HHHHCHHHHHHHHHHHHHHHHHHHCCHHHHC..HHHHHT--SSTTS--HHHHHHHHHHHHHHHHCHHCT-GS----S.-SSHHHHHHHHHHHHHHHHCS CS
     DUF1993   1 lydasvpvfikglknlsalLkkaeahaaakkidpeellearLapDMlpLsfQvqiatdtakkavarlagkeppsledeektfadlrariaktialLesv 99 
                 ly++svpv+ik lk+ls++L+k++ah a ++   ++l+++rLa DM +++fQ+q ++d+ak +++r+ + +p++led+ekt+++l++ri+kti++Lesv
  KHJ33473.1   4 LYQISVPVYIKNLKSLSKILEKGSAHEAVSN---DQLINTRLAADMENFTFQIQRVSDAAKFLAERVGKIAPVTLEDNEKTYEELQERIKKTIEILESV 99 
                 8*************************99886...99*************************************************************** PP

                 -GGGHCCCCCEEEE.C.CCCCEEEEHHHHHHHTHHHHHHHHHHHHHHHHHHCT----HHHHH CS
     DUF1993 100 dpekldakeekevelklggkeleftgeeyllefalPnfyFHlttaYaILRkkGVelGkaDyl 161
                 +++++ ++e  ev+++l+g++++f+ ++y+le+a PnfyFH++taYa+LRk+GV++Gk+Dyl
  KHJ33473.1 100 KESDFAGEE-DEVSFSLKGHDFKFSSKNYVLEWATPNFYFHFVTAYALLRKEGVNIGKKDYL 160
                 *****9865.67899**********************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1470  (0.0819901); expected 358.6 (0.02)
Passed bias filter:                      900  (0.050198); expected 358.6 (0.02)
Passed Vit filter:                        83  (0.00462937); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1191.52
//
Query:       KHJ33474.1  [L=333]
Description: putative short-chain dehydrogenase reductase family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.1e-28   97.2   0.0    1.1e-25   90.3   0.0    2.1  1  adh_short        short chain dehydrogenase
    4.4e-17   62.4   0.0    6.2e-15   55.4   0.0    2.1  1  adh_short_C2     Enoyl-(Acyl carrier protein) reductase
    1.6e-09   37.9   0.0    3.6e-09   36.8   0.0    1.5  1  KR               KR domain
  ------ inclusion threshold ------
      0.016   14.7   0.0      0.023   14.2   0.0    1.2  1  Epimerase        NAD dependent epimerase/dehydratase family
       0.15   11.2   0.0       0.28   10.3   0.0    1.5  1  Polysacc_synt_2  Polysaccharide biosynthesis protein


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.3   0.0     3e-29   1.1e-25       1     192 [.      24     239 ..      24     241 .. 0.83

  Alignments for each domain:
  == domain 1  score: 90.3 bits;  conditional E-value: 3e-29
                 SEEEEESTTSHHHHHHHHHHHHTT.-EEEEEESCHHHHHHHHHHHHHT..TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGC CS
   adh_short   1 kvvlvtGassGIGraiakelakeG.akvvvvdrseekleevakelkee..gakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfsel 96 
                 kv+++tG+++GIG+++a +la+++ a++++ +r++ ++ ++++++k++  +ak+ ++++D++d e+v+   ++  ++ ++ld+L  NAGi   + +   
  KHJ33474.1  24 KVIFITGGTRGIGYQTALALARKNpAHIYISGRNQTTADKALASIKSAvpSAKVSYLPCDLADLESVKSCAREFLNREKRLDLLFLNAGIM--V-TPAG 119
                 89*******************887255666************************************************************3..3.3334 PP

                 SHHH.HHHHHHHHTHHHHHHHHHHHHHHH.....HCTTEEEEEEEEGG................GTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGT.. CS
   adh_short  97 seee.wervievNltgvflltravlpaml.....kqssGrIvnvsSva................gkvpvagvaaYsAsKaavagltrslakelaptg.. 171
                 ++++ +e  + +N  g fllt+++lp++       +   rI+ vsS+a                  +++ ++  Y+ sK a + +t++lak+l+++   
  KHJ33474.1 120 KSKQgYEIQFGTNHIGHFLLTKLLLPTLEkttslPGTDVRIISVSSIAhyfapcqgivfselktEMESWLSMRRYGQSKLANILFTKQLAKQLKNQDsk 218
                 444449999******************9977666677889******9833333332222222212234556778*******************998777 PP

                 EEEEEEEESSBSSHHHHHHCT CS
   adh_short 172 irvnavaPGlvdTdmakelre 192
                 i  ++++PG+vdT++ + +++
  KHJ33474.1 219 ILAVSIHPGVVDTGLYEYIEK 239
                 *************99887765 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.4   0.0   1.7e-18   6.2e-15       3     184 ..      32     239 ..      30     271 .. 0.79

  Alignments for each domain:
  == domain 1  score: 55.4 bits;  conditional E-value: 1.7e-18
                   TTSHHHHHHHHHHHTT.-EEEEEESSGGH.HHHHHHHHHHTTSE.E..EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHH CS
  adh_short_C2   3 asgIGraiAkalaeeG.aevvltdlneea.kkrveelaeelgae.v..lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsree 94 
                    +gIG+++A ala++  a++ ++ +n+   +k++++++++++++ v  l+cD +d e+v+++++e  ++ ++lD l+ nagi+ +     +  s+++
    KHJ33474.1  32 TRGIGYQTALALARKNpAHIYISGRNQTTaDKALASIKSAVPSAkVsyLPCDLADLESVKSCAREFLNREKRLDLLFLNAGIMVT----PAGKSKQG 124
                   69**********9875599**********9999*******99666678************************************9....456699** PP

                   HHHHHHHHTHHHHHHHHHHHHHCTSC.......CEEEEEEEGGG................TSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEE CS
  adh_short_C2  95 fdraldvnlyslfllakaalplmkeg.......gsivnlssvga................ervvpnynaygaaKaalealtrylAvelgpkgiRvNa 168
                   ++  + +n  + fll+k +lp ++++        +i+ +ss++                   ++ +   yg +K a + +t++lA++l ++  ++ a
    KHJ33474.1 125 YEIQFGTNHIGHFLLTKLLLPTLEKTtslpgtdVRIISVSSIAHyfapcqgivfselkteMESWLSMRRYGQSKLANILFTKQLAKQLKNQDSKILA 221
                   *********************8887768886666799999997522222221111111111223344479******************997666655 PP

                   EE..E--BHCTGGGGSTT CS
  adh_short_C2 169 vs..pgpikTlaasgikg 184
                   vs  pg+++T + + i++
    KHJ33474.1 222 VSihPGVVDTGLYEYIEK 239
                   5444*******9998886 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.8   0.0     1e-12   3.6e-09       4      92 ..      27     114 ..      25     126 .. 0.87

  Alignments for each domain:
  == domain 1  score: 36.8 bits;  conditional E-value: 1e-12
                 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT..T-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE----- CS
          KR   4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal..gaevevvaaDvsdkdavealleeikaeeppikGvihaAgvl 92 
                 +itGG+ g+G ++a  la+k  +h+ + +R+ ++++d+   +a++++    a+v+++++D++d ++v+++ +e+ ++e+++   +  Ag++
  KHJ33474.1  27 FITGGTRGIGYQTALALARKNPAHIYISGRN-QTTADK--ALASIKSAvpSAKVSYLPCDLADLESVKSCAREFLNREKRLDLLFLNAGIM 114
                 7******************************.444443..466666655699*************************99999999998886 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   6.4e-06     0.023       1     159 [.      26     211 ..      26     226 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 6.4e-06
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC.........EEEE--TT-HH....HHHHHHHHH.T-SEEEE--S---HHHHHHSHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl.........elveldltdrs....alerlfkee.qpdavihlAavggvaassedpa 85 
                 i++tG+t  iG +++ al++k+   i ++ ++++ + ++l+ +         +   +dl d +    + ++++++e + d  ++ A++   +a  +++ 
  KHJ33474.1  26 IFITGGTRGIGYQTALALARKNPAHIYISGRNQTTADKALASIksavpsakvSYLPCDLADLEsvksCAREFLNREkRLDLLFLNAGIMVTPAGKSKQG 124
                 79********************444444433333333333434557******8888999988755556678888888**********666666666666 PP

                 HHHH..HHTHHHHHHHHHHH..........HHTCTEEEEEEE.GGGGTSCSSS.SBSTCSTTS----SSHHHHHHHHHHHHHHHHHHH CS
   Epimerase  86 dfie..knlqgtlnlleaar..........kagvkrllflsS.sevYGkdaeq.pkeettltgplkpnspYaaaKlageklveayaaq 159
                 + i+  +n +g   l + +            ++v r++ +sS ++ + + + +   e +t+ +++ + + Y+ +Kla    ++++a+q
  KHJ33474.1 125 YEIQfgTNHIGHFLLTKLLLptlekttslpGTDV-RIISVSSiAHYFAPCQGIvFSELKTEMESWLSMRRYGQSKLANILFTKQLAKQ 211
                 6665569999999999998877776655544455.*******66666777776459999999999************99998888776 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   7.9e-05      0.28       1      72 [.      26      93 ..      26     123 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 7.9e-05
                     EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHH CS
  Polysacc_synt_2  1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerleka 72
                     +++tG++  iG +    +++k+p++i++  r+ ++ ++   ++++ + + k+++      +d++d e+++++
       KHJ33474.1 26 IFITGGTRGIGYQTALALARKNPAHIYISGRNQTTADKALASIKSAVPSAKVSYL----PCDLADLESVKSC 93
                     78*******************************9999999999888888777444....3444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       620  (0.0345808); expected 358.6 (0.02)
Passed bias filter:                      571  (0.0318478); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 2502.90
//
Query:       KHJ33475.1  [L=498]
Description: putative glycosyltransferase family 31 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-10   39.8   0.0    6.1e-10   39.0   0.0    1.3  1  Fringe    Fringe-like
    2.7e-08   33.5   0.1    5.5e-08   32.5   0.1    1.4  1  DUF604    Protein of unknown function, DUF604


Domain annotation for each model (and alignments):
>> Fringe  Fringe-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.0   0.0   6.8e-14   6.1e-10      77     207 ..     213     335 ..     177     359 .. 0.74

  Alignments for each domain:
  == domain 1  score: 39.0 bits;  conditional E-value: 6.8e-14
      Fringe  77 aeydafleskkkWfchvDDDnyln.veaLlklLskynhtqdvylGkpsldrpieaterteenkkkkvkfwfatGGaGfclsralalkl..aPwasggrf 172
                 +  ++ +++++kWf+++DDD++   +++L+++Ls+y+ht   y+G    +               + +  fa GG+G+ +s   +++l  aP  ++ + 
  KHJ33475.1 213 MLNNHPTRDQRKWFVLIDDDTFFPyMHELQRVLSAYDHTLPYYIGTFTERMDWM----------LSNHAPFAYGGGGIFMSLPTIKQLsqAPCLQKNQ- 300
                 45567788999**********9963799*****************754332222..........334556889**********999983345333322. PP

      Fringe 173 vstsekirl.pdDctlGfiieelLgvslthsslfHs 207
                  ++s  ++    D  l  +i++  +++lth +l+H+
  KHJ33475.1 301 -DNSYVLNAdQGDRLLYNCIHRFTNITLTHLPLLHQ 335
                 .22222222156999********************8 PP

>> DUF604  Protein of unknown function, DUF604
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   0.1   6.2e-12   5.5e-08       9     102 ..     273     369 ..     266     375 .. 0.80

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 6.2e-12
      DUF604   9 mafGGgGfaiSyplakaLakvldeClerYpk...lyg...sddriqaClael.GvpltkekGfHqvDlrgdllGlLaahplaplvslHHldavepifPk 100
                  a+GGgG+ +S p  k+L+++   Cl++ ++   +      d+ +++C+  +  ++lt+ + +Hq+D  gd +G+  +   +p +slHH +  + + P+
  KHJ33475.1 273 FAYGGGGIFMSLPTIKQLSQA--PCLQKNQDnsyVLNadqGDRLLYNCIHRFtNITLTHLPLLHQLDQFGDPSGFYESGR-QP-LSLHHYKSWHRFSPE 367
                 69****************875..7998865322233312257789*****98359********************98764.56.5******99999987 PP

      DUF604 101 mt 102
                   
  KHJ33475.1 368 PA 369
                 65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (498 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       452  (0.0252106); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.21s 00:00:00.72 Elapsed: 00:00:00.35
# Mc/sec: 4207.45
//
Query:       KHJ33476.1  [L=714]
Description: putative gtp binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.13   12.2   0.1         17    5.5   0.0    2.5  2  STI1      STI1 domain


Domain annotation for each model (and alignments):
>> STI1  STI1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.003        53      13      32 ..      38      57 ..      27      57 .. 0.95
   2 ?    5.5   0.0   0.00093        17      14      30 ..     596     612 ..     593     614 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.003
        STI1 13 etrellsDPefvakleeiqs 32
                et+ellsD ++  +++e+q+
  KHJ33476.1 38 ETAELLSDTQVKEIVDEVQN 57
                89****************96 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.00093
        STI1  14 trellsDPefvakleei 30 
                 + ++l+DPef   l ++
  KHJ33476.1 596 VNQILQDPEFSELLTQL 612
                 57899999999998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (714 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       660  (0.0368119); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 4949.02
//
Query:       KHJ33477.1  [L=355]
Description: hypothetical protein EV44_g5485 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.22   10.1   2.6       0.29    9.7   2.6    1.1  1  TFIIF_alpha  Transcription initiation factor IIF, alpha subun


Domain annotation for each model (and alignments):
>> TFIIF_alpha  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   2.6   1.6e-05      0.29     357     429 ..      50     135 ..      40     181 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 1.6e-05
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXX...XXXXXXXXXXXXXXXXXXXXXXXX............XXXXXX... CS
  TFIIF_alpha 357 deedsddsDideedsvslvkakKkkekkkeekvdsnes...sagnsrparpspeqkdskskrkaa..........seeskspvsvp 429
                  +++d+dd+D+d+++s+sl+ +     + + + v s++s   s++ +r  +p+ ++  ++++  ++            + k p s+p
   KHJ33477.1  50 NSSDDDDDDDDHAASTSLLYNADAEAEINARDVRSSSSakvSSTLTRRIQPTSDAACASTTATTTitsckeilgcMSQKKRPLSSP 135
                  45678888888889999998887777677777766665222667788888888877766666555555555555534444555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2731.96
//
Query:       KHJ33478.1  [L=323]
Description: hypothetical protein EV44_g4315 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       845  (0.0471303); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2383.67
//
Query:       KHJ33479.1  [L=186]
Description: putative gpi anchored serine-threonine rich protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.022   14.8  13.1      0.044   13.9  13.1    1.5  1  CFEM           CFEM domain


Domain annotation for each model (and alignments):
>> CFEM  CFEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9  13.1   2.4e-06     0.044       9      65 ..      42      95 ..      34      96 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.4e-06
                GTCGGG---TTSS.S-TT-HHHHHH-HHHHHHHHHHHHHH--THHHHHHHHHHH.HHH CS
        CFEM  9 aqdClaeavkkssgCakddtaCiCtnaklqseitdCvtaaCtaeealaavnaas.slC 65
                + +C+ ++++  ++Ca++d+aC+C   + +++i +C+ ++C+++  l+av  ++ s+C
  KHJ33479.1 42 LDTCISSTTAIATACALTDYACLC---QKNTDILTCF-NNCPNDPRLSAVRSTQaSYC 95
                568****9987779**********...5567899998.78998888766655553888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1117  (0.0623013); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.46
# Mc/sec: 1217.95
//
Query:       KHJ33480.1  [L=469]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3433.68
//
Query:       KHJ33481.1  [L=757]
Description: putative origin recognition complex subunit 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-16   59.1   0.0    2.3e-15   57.2   0.0    2.1  1  AAA         ATPase family associated with various cellular ac
    1.9e-11   44.4   0.0      2e-09   37.9   0.0    2.7  3  AAA_22      AAA domain
    1.1e-10   41.5   1.4    2.4e-10   40.4   0.2    2.2  2  AAA_lid_10  AAA lid domain
    6.4e-10   39.7   0.0    1.1e-08   35.7   0.0    2.6  2  AAA_16      AAA ATPase domain
    1.6e-05   24.7   0.0    3.6e-05   23.6   0.0    1.6  1  BAH         BAH domain
      0.001   19.4   0.0     0.0025   18.1   0.0    1.7  1  AAA_19      AAA domain
     0.0071   16.6   0.8      0.072   13.3   0.1    2.3  2  AAA_28      AAA domain
     0.0076   16.1   0.7       0.04   13.7   0.0    2.1  2  AAA_11      AAA domain
     0.0094   15.2   0.3       0.37   10.0   0.0    2.6  3  DUF2075     Uncharacterized conserved protein (DUF2075)
  ------ inclusion threshold ------
      0.019   14.9   0.1      0.067   13.1   0.0    2.0  2  NACHT       NACHT domain
      0.035   14.3   0.1       0.17   12.0   0.0    2.2  2  AAA_33      AAA domain
      0.045   14.3   0.2       0.24   12.0   0.0    2.3  3  AAA_18      AAA domain
      0.046   12.9   0.4       0.16   11.1   0.0    2.0  2  PIF1        PIF1-like helicase
      0.059   13.1   0.1       0.13   12.0   0.1    1.5  1  AAA_30      AAA domain
      0.065   13.1   0.8       0.95    9.3   0.0    2.8  2  ATPase_2    ATPase domain predominantly from Archaea
      0.081   13.2   0.0       0.18   12.0   0.0    1.6  1  ssDBP       Single-stranded DNA-binding protein


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.2   0.0     2e-18   2.3e-15       1     129 [.     376     518 ..     376     521 .. 0.82

  Alignments for each domain:
  == domain 1  score: 57.2 bits;  conditional E-value: 2e-18
                 EEEESSTTSSHHHHHHHHHHHHT..........HEEEEEETTTCSSS............STTHHHHHHHHHHHHHHHTS....TSEEEEEETGGGHHHH CS
         AAA   1 vllyGppGtGKTllakavakelg..........vefleisgsellsk............yvgesekkirelfkeakeka....kpsilfiDEidalaks 73 
                 ++++G+pGtGKT++++ v+ +l+          ++f+ei+g+++++                 s+ +  +l+++  ++     +p+++++DE+d+l+++
  KHJ33481.1 376 IYISGTPGTGKTATVREVVAQLQaatlaeeldpFNFVEINGMKITDPtqsysilwealkGERISPTHALDLLQREFTNPsprrTPCVVLMDELDQLVTK 474
                 5899*****************95444444455577**********7789*****9997744445555556666543333577799************** PP

                 HTTCCCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHHHSTTSSEEEE CS
         AAA  74 rsgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallrgRfdrkie 129
                 +           + ++++++++   ++s++iv++++n++d +++ l  +++++++ 
  KHJ33481.1 475 N-----------QLVMYNFFNWPGLSHSHLIVLAVANTMDLPERTLS-NKISSRLG 518
                 *...........*********************************99.88887765 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       5.8   6.5e+03      51      71 ..     238     265 ..     225     298 .. 0.69
   2 !   37.9   0.0   1.8e-12     2e-09       4     112 ..     372     483 ..     369     507 .. 0.83
   3 ?    3.4   0.0     0.077        86      53     113 ..     609     681 ..     574     699 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 5.8
      AAA_22  51 tsskdllrellralglelka.......e 71 
                 +  ++l++++  ++ +++k+       +
  KHJ33481.1 238 EQAENLYQRIKAETMSRKKKliqkrntN 265
                 4566777777777777777766654443 PP

  == domain 2  score: 37.9 bits;  conditional E-value: 1.8e-12
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaee.erpevvfvtlpsstsskdllrellralglelkaerlsseell.ealeqalraravielliiDEa 100
                 t  ++++ G +GtGKT ++r+++ ql+++  aee  +  +v+++  + t++++ ++ l +al+ e+ + +    +ll + +++ + +r    +++ DE 
  KHJ33481.1 372 TGACIYISGTPGTGKTATVREVVAQLQAATLAEElDPFNFVEINGMKITDPTQSYSILWEALKGERIS-PTHALDLLqREFTNPSPRRTP-CVVLMDEL 468
                 6789**********************99999999888888999999999**************99999.555566665999999999999.******** PP

      AAA_22 101 qhlr...seealeeL 112
                 + l    +  +++++
  KHJ33481.1 469 DQLVtknQLVMYNFF 483
                 **9754335555554 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.077
      AAA_22  53 skdllrellralglelka....erlsseellealeqalrarav...ielliiDEaqhlr.s....eealeeLr 113
                  + ++r++ +a+ ++l +     +lss+ ll al+q  r+++    +   ++DEa +l  +     e++e+L 
  KHJ33481.1 609 IDIIRRAIKEATASPLQNylreLPLSSKLLLIALTQRTRRTGIgeeTLGEVLDEAKKLAkQntncRENFEFLL 681
                 45568889999999988888877788888888888888888889998999********862567888888883 PP

>> AAA_lid_10  AAA lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       7.7   8.7e+03      10      28 ..      78      96 ..      75     106 .. 0.69
   2 !   40.4   0.2   2.1e-13   2.4e-10      45      81 ..     548     584 ..     541     589 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 7.7
                ------------------- CS
  AAA_lid_10 10 sffyvnektgsailieaee 28
                s+  vn++t+s++ ++++ 
  KHJ33481.1 78 SMKTVNDNTESSQKNKIKG 96
                4556889999888887764 PP

  == domain 2  score: 40.4 bits;  conditional E-value: 2.1e-13
                 ------HHHHHHHHHHT-TTTTHHHHHHHHHHHHHHH CS
  AAA_lid_10  45 isddaieiasrkvAsvsgdarrAlkiCkrAvEiaekd 81 
                 +++daie asrkvA vsgdarr l iC+rAvE+ae +
  KHJ33481.1 548 VEKDAIEFASRKVAAVSGDARRVLDICRRAVELAESE 584
                 579*******************************976 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.7   0.0   9.5e-12   1.1e-08       2     150 ..     350     474 ..     349     496 .. 0.68
   2 ?   -3.0   0.0       7.4   8.3e+03     107     132 ..     559     583 ..     527     587 .. 0.65

  Alignments for each domain:
  == domain 1  score: 35.7 bits;  conditional E-value: 9.5e-12
      AAA_16   2 lvGReeeleqLlsale.rvrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawre 99 
                 l++Re+e + + s le ++ +g++ ++++sG +G+GK++ vre+  +l+++   +l+++ d +              + e+     ++++++    w +
  KHJ33481.1 350 LPCREDEFASVYSHLEaAIIEGTGACIYISGTPGTGKTATVREVVAQLQAA---TLAEELDPF-------------NFVEINGMKITDPTQSYSILWEA 432
                 89**************77788888************************998...688888888.............22233333334444445555555 PP

      AAA_16 100 kleealaavpelagaeasrllellkrllallsrderplvlvlDdlqwadea 150
                    e+++         +++ l+ll+r +   s+++ p v+++D+l+++ + 
  KHJ33481.1 433 LKGERIS---------PTHALDLLQREFTNPSPRRTPCVVLMDELDQLVTK 474
                 4444444.........36666666666655555566666666666666555 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 7.4
      AAA_16 107 avpelagaeasrllellkrllallsr 132
                  v++++g+ a+r+l+ ++r+++l+++
  KHJ33481.1 559 KVAAVSGD-ARRVLDICRRAVELAES 583
                 33333443.58999999999988886 PP

>> BAH  BAH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   3.3e-08   3.6e-05      31     109 ..     129     214 ..      78     221 .. 0.79

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 3.3e-08
                 ETTSTCEEEEEEEEEEECGGGS...TTTTHCCCTTEEEEEEEEEEEEGGGEEEEEEEEEHHHHCTECCHCH....HCSTTEEEEEE CS
         BAH  31 nakneeaeatvlvdwflrpeet...ksalklrqkrElfltrqseilplaairgkcrVvllsdleeaqnylp....kklddtFycsl 109
                 n+ +   + +v++ wf+  +++   ++++  + ++E++lt+++++++l++i g ++V++++ +++  ++ +     k + +F+c+ 
  KHJ33481.1 129 NSIRPGPNSKVNILWFSSHKDIcnkQKKRTDFLPNEIYLTPHKDSINLDTINGPVEVLSEELFNQKYPKTTskksAKFEAKFICRR 214
                 4444456789************864444445666*************************999998888887665666677777765 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   2.3e-06    0.0025       5      38 ..     368     401 ..     364     482 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 2.3e-06
      AAA_19   5 vealkekvllvtaGpGtGKTrvlkhivallvelg 38 
                 + + +  ++ + + pGtGKT +++++va l++++
  KHJ33481.1 368 IIEGTGACIYISGTPGTGKTATVREVVAQLQAAT 401
                 347788999*******************998765 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1      0.39   4.4e+02     121     146 ..     227     252 ..     201     265 .. 0.81
   2 !   13.3   0.1   6.4e-05     0.072       1      27 [.     375     402 ..     375     407 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.39
      AAA_28 121 idddgeRredleereaiderlrealr 146
                 +++ + R++++e++e++++r+++   
  KHJ33481.1 227 FVWEDIRPKTEEQAENLYQRIKAETM 252
                 357889**************998655 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 6.4e-05
      AAA_28   1 kivitGgestGKTtlleaLaar.gypvv 27 
                 +i+i+G+++tGKT ++++  a+ +  ++
  KHJ33481.1 375 CIYISGTPGTGKTATVREVVAQlQAATL 402
                 59**************998776555555 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.4      0.67   7.5e+02     122     148 ..     240     266 ..     180     301 .. 0.52
   2 !   13.7   0.0   3.6e-05      0.04      19      42 ..     375     398 ..     358     434 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.67
      AAA_11 122 kaqlakeiskeleklakelrafeeeee 148
                   +l ++i++e+ + +k+l ++ ++++
  KHJ33481.1 240 AENLYQRIKAETMSRKKKLIQKRNTNT 266
                 222222222222222222211111111 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 3.6e-05
      AAA_11  19 itliqGPPGtgKTktivellsqll 42 
                    i+G PGtgKT t+ e+++ql 
  KHJ33481.1 375 CIYISGTPGTGKTATVREVVAQLQ 398
                 56799*****************93 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.3         5   5.6e+03     319     330 ..     244     255 ..     220     275 .. 0.37
   2 !   10.0   0.0   0.00033      0.37       2      27 ..     374     399 ..     373     480 .. 0.71
   3 ?    2.6   0.0     0.059        66     182     235 ..     658     712 ..     617     728 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 5
     DUF2075 319 sedkeakskrkk 330
                 ++ ++a++ + k
  KHJ33481.1 244 YQRIKAETMSRK 255
                 222222221111 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00033
     DUF2075   2 avvlVtGvaGtGKtvvllnllaeled 27 
                 a++ ++G +GtGKt    +++a+l+ 
  KHJ33481.1 374 ACIYISGTPGTGKTATVREVVAQLQA 399
                 5789*****************99932 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.059
     DUF2075 182 alldgkkekakplss.qenfdirvfddleelkkalkeknkesgrsrlvatydakr 235
                 ++ld+ k+ ak++++ +enf++ ++ ++ ++ +   ++++ s   r++a ++a  
  KHJ33481.1 658 EVLDEAKKLAKQNTNcRENFEFLLTANPLQIPEIGTQRQNISSAPRVLAMSTAAM 712
                 6788888888888778******************9999999999***99998866 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0     6e-05     0.067       3      99 ..     376     477 ..     374     518 .. 0.68
   2 ?   -3.6   0.0       8.4   9.4e+03     109     134 ..     624     649 ..     615     667 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 6e-05
                 EEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEE.EETTTTTTS-....-HCHHHCCCCTS--SSS-C...CHHHHCCSCCCEEEEEE-STT-SS- CS
       NACHT   3 vilqGeaGsGKTtLlqklalawaegklpqgafklvFf.lslrelsrsgna.rsladllfsqlpepaapvse...vwavllelperlLlilDglDelvtd 96 
                 + + G +G GKT+ +++++ ++++ +l ++  ++ F+ ++  ++++++++   l + l  +   p  + +     +++   +++  + ++D lD+lvt+
  KHJ33481.1 376 IYISGTPGTGKTATVREVVAQLQAATLAEELDPFNFVeINGMKITDPTQSySILWEALKGERISPTHALDLlqrEFTNPSPRRTPCVVLMDELDQLVTK 474
                 6799*************************8867766633334444544444445555555544444433333334666677777778888888888887 PP

                 TCH CS
       NACHT  97 lgq 99 
                 ++ 
  KHJ33481.1 475 NQL 477
                 776 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 8.4
                 HHHHHCTTTTT--EEEEEEECCCHHH CS
       NACHT 109 Lselirkkllpeasllltvrpralrd 134
                 L++ +r+  l++  ll++++ r++r 
  KHJ33481.1 624 LQNYLRELPLSSKLLLIALTQRTRRT 649
                 67777774444445555555544433 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       4.1   4.6e+03      47      66 ..     243     262 ..     219     284 .. 0.55
   2 ?   12.0   0.0   0.00016      0.17       3      32 ..     377     406 ..     376     454 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 4.1
      AAA_33  47 dytrvldrlyqilnelarka 66 
                  y+r++ ++  + ++l++k+
  KHJ33481.1 243 LYQRIKAETMSRKKKLIQKR 262
                 33333333333333333322 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 0.00016
      AAA_33   3 llvGlpGsGKstlaerllkklgavllssdt 32 
                 ++ G pG+GK+  +++++++l+a +l++  
  KHJ33481.1 377 YISGTPGTGKTATVREVVAQLQAATLAEEL 406
                 778*******************99998765 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.3       5.5   6.2e+03     104     120 ..     241     257 ..     236     271 .. 0.73
   2 ?   12.0   0.0   0.00021      0.24       1      25 [.     376     413 ..     376     502 .. 0.63
   3 ?   -2.9   0.0       8.5   9.6e+03      16      79 ..     664     722 ..     655     724 .. 0.57

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 5.5
      AAA_18 104 eelleRlekRgyeeaki 120
                 e l++R+++   + +k+
  KHJ33481.1 241 ENLYQRIKAETMSRKKK 257
                 78999999988776664 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 0.00021
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.............g 25 
                 I ++GtpG+GKt   +e+   l+               
  KHJ33481.1 376 IYISGTPGTGKTATVREVVAQLQAatlaeeldpfnfvE 413
                 789**************966652224444444445441 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 8.5
      AAA_18  16 keLskrl.gfgvnlrdvakenglllevdpealdeskrldedkldklldaleenssaleegknlvi 79 
                 k L+k + ++ +n  ++++ n l +++     +++++   +++ + ++a ++      e++++v+
  KHJ33481.1 664 KKLAKQNtNCRENFEFLLTANPLQIPEIGT--QRQNISSAPRVLAMSTAAMNL----VEAGVIVL 722
                 556666656666666666666666655555..555555555555555554443....34555555 PP

>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.2       2.1   2.3e+03     242     286 ..     235     274 ..     221     291 .. 0.54
   2 ?   11.1   0.0   0.00015      0.16       5      48 ..     356     399 ..     353     403 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 2.1
                 .HHCHCCS---SS--...........EEEESSCCHHHHHHHHHHC CS
        PIF1 242 kieeivsevygdllqeltdkeyleerailcptnedvdeiNnyvls 286
                 k+ee +++ y+++ +e++     +++ +l+ ++++  ++Nn++ +
  KHJ33481.1 235 KTEEQAENLYQRIKAETM-----SRKKKLIQKRNTNTNTNNDLNN 274
                 555566666666555433.....3334444444444444444433 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00015
                 HHHHHHHHH......HCTS-EEEEESTTSSCHHHHHHHHHHCHC CS
        PIF1   5 eQkkvfdaiieavlnekgklfFvtGsgGtgKtflwkallkklrs 48 
                 e ++v+ +  +a+++  g  ++++G  GtgKt   ++++++l++
  KHJ33481.1 356 EFASVYSHLEAAIIEGTGACIYISGTPGTGKTATVREVVAQLQA 399
                 667899999999**********************9999999876 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   0.00011      0.13      13      45 ..     368     400 ..     363     411 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00011
      AAA_30  13 lltsgdrvavltGpAGtGKttalkalreaweaa 45 
                 +++++  +  + G +GtGKt +++++++ ++aa
  KHJ33481.1 368 IIEGTGACIYISGTPGTGKTATVREVVAQLQAA 400
                 55556668899***************9888776 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.3       5.5   6.1e+03      45     107 ..      24      87 ..      18     101 .. 0.71
   2 ?    9.3   0.0   0.00085      0.95      11      47 ..     364     400 ..     353     504 .. 0.68

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 5.5
    ATPase_2  45 edkdkyviyyialreesiskldefieeeeekkklekalgiavpkaeleeilk.eksklvfkaie 107
                 +d++  v y ++  ++s++   efi ee+++ ++ + +   v + e   +l+ +  k v+ + e
  KHJ33481.1  24 DDHNSAVNYDSDGGSYSETDHWEFIFEEKNDIFAGNEVPHLVVTEENTDFLSlSSMKTVNDNTE 87 
                 4566678888888888888888998899998888888877777777766766655555554444 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00085
    ATPase_2  11 leeilerepneiyfiYGpegsGKtaLlkeiienledk 47 
                 le  + +++   ++i G  g GKta ++e++ +l+  
  KHJ33481.1 364 LEAAIIEGTGACIYISGTPGTGKTATVREVVAQLQAA 400
                 56667789999********************999653 PP

>> ssDBP  Single-stranded DNA-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00016      0.18       4      33 ..     372     401 ..     369     435 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00016
       ssDBP   4 tasctyrsgtsgagkpytmaeayahlpgcd 33 
                 t +c y sgt g+gk  t+ e  a l    
  KHJ33481.1 372 TGACIYISGTPGTGKTATVREVVAQLQAAT 401
                 789********************9997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (757 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       902  (0.0503096); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        80  (0.00446204); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.69u 0.30s 00:00:00.99 Elapsed: 00:00:00.43
# Mc/sec: 5296.79
//
Query:       KHJ33482.1  [L=543]
Description: putative ran protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-52  178.5   0.0    2.3e-52  178.0   0.0    1.2  1  Pkinase          Protein kinase domain
    2.5e-30  105.7   0.0    3.3e-30  105.2   0.0    1.2  1  Pkinase_Tyr      Protein tyrosine kinase
     0.0018   17.7   0.0      0.065   12.5   0.0    2.3  2  Kinase-like      Kinase-like
     0.0048   16.3   0.0      0.012   15.0   0.0    1.6  2  Kdo              Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.028   14.3   0.0      0.047   13.6   0.0    1.2  1  APH              Phosphotransferase enzyme family
      0.034   13.1   0.0      0.064   12.2   0.0    1.3  1  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
      0.043   13.4   0.1      0.083   12.5   0.1    1.5  1  Choline_kinase   Choline/ethanolamine kinase
       0.11   11.4   0.0       0.11   11.4   0.0    1.5  2  Haspin_kinase    Haspin like kinase domain


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.0   0.0     1e-55   2.3e-52       2     255 ..      41     295 ..      40     302 .. 0.80

  Alignments for each domain:
  == domain 1  score: 178.0 bits;  conditional E-value: 1e-55
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.....HHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.....kkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgs 94 
                 e ++ +G+Gs+G+Vy av+++t+  +AvK ++k   +         k  lrEi++++  + hpn+v +y+++ e+d  y+vley+e g+l++ ++++g+
  KHJ33482.1  41 ELKKLIGTGSYGVVYLAVDNKTNACYAVKALNKVTSNGLPLderqrKFQLREIHLHHLASsHPNVVSMYKIVDEPDCTYVVLEYCEDGDLFTNITERGK 139
                 56899****************************98864332334457889*******9999******************************99997776 PP

                 .--HH.HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTE.EEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH....TTSCBSHHHHHHHHHHH CS
     Pkinase  95 .lsee.eakkiakqilegleylHskgiiHrDlKpeNiLidekge.lKitDFGlakelessskltsfvgtseYlAPEvl....keneyskkvDvWslGvi 186
                  +s++  ++ i+ qil+++e++H+ gi HrDlKpeNiL++++g  + ++DFGla+    s+  ++ +g+  Y++PE +    k + +  + DvWslGv+
  KHJ33482.1 140 fVSDDdLIRYIFGQILNAVEFCHNLGIYHRDLKPENILVSNNGAkVLLADFGLATLDAISE--DHGCGSTFYMSPECIdkskKVKFHCGPNDVWSLGVV 236
                 444442678999****************************77766**********988877..9**************8542223346788******** PP

                 HHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTH CS
     Pkinase 187 lyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlta 255
                 l++l++g++p+++ + ++++++ +                l++   is+ + ++++++++ +p+ R+ +
  KHJ33482.1 237 LLNLTCGQNPWKQASLDDSTYRAFLANP----------GFLQTILPISDGLNKIIQRIFDCNPQYRVDI 295
                 ************6554443333222211..........2223334467788888888888888777765 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.2   0.0   1.5e-33   3.3e-30       1     256 [.      40     299 ..      40     302 .. 0.84

  Alignments for each domain:
  == domain 1  score: 105.2 bits;  conditional E-value: 1.5e-33
                  EEEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST....TS..SHHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHH CS
  Pkinase_Tyr   1 lelgkklGeGafGkVvegtlkgekekkevkVavKtlke....ea..teeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkf 91 
                  lel+k +G G++G V+ +  +    k++   avK l++    +   +e++++  l+e+++ +   +hpn+v+++ ++ + + +++v+ey++ GdL + 
   KHJ33482.1  40 LELKKLIGTGSYGVVYLAVDN----KTNACYAVKALNKvtsnGLplDERQRKFQLREIHLHHLAsSHPNVVSMYKIVDEPDCTYVVLEYCEDGDLFTN 133
                  68999*************999....5555666676655211133113444444467888777669********************************* PP

                  HHHTCTTTSBHHHHHHHHH.HHHHHHHHHHHTTEEEST-SGGGEEEEETT.EEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE....EE CS
  Pkinase_Tyr  92 Lrkkekekltlkdllsfal.qvAkGmeyLeskklvHrdlaarNvLlsenk.vvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk....ft 183
                  ++++  + ++ +dl+++++ q+ +++e+ ++  + Hrdl   N+L+s+n  +v ++DfGLa          +++++  +  +m+pE+++++k      
   KHJ33482.1 134 ITER-GKFVSDDDLIRYIFgQILNAVEFCHNLGIYHRDLKPENILVSNNGaKVLLADFGLATLD-----AISEDHGCGSTFYMSPECIDKSKkvkfHC 225
                  ***9.9999999999987659**************************97669*********976.....77888899999********9998777444 PP

                  HHHHHHHHHHHHHHHHTTSSGTTTTS..HHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 184 sksDvWsfGvllwEiftlgespypgl..kneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselv 256
                     DvWs Gv+l  + + g++p+++   ++++  ++l +   l++   +++ l++++++ ++ +p+ R ++ +l 
   KHJ33482.1 226 GPNDVWSLGVVLLNLTC-GQNPWKQAslDDSTYRAFLANPGFLQTILPISDGLNKIIQRIFDCNPQYRVDIISLK 299
                  578***********998.*****998535556667779999999999*******************999877665 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0      0.03        67      12      45 ..      38      71 ..      33     113 .. 0.85
   2 !   12.5   0.0   2.9e-05     0.065     152     253 ..     153     250 ..     135     292 .. 0.71

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.03
  Kinase-like 12 rtlvrgellkkgdrsvvfevkdqetgeplavkvf 45
                 +tl  ++l++ g  +vv+++ d++t+   avk  
   KHJ33482.1 38 KTLELKKLIGTGSYGVVYLAVDNKTNACYAVKAL 71
                 78999*********************99999864 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 2.9e-05
  Kinase-like 152 qlirlaanLqakglvhgkftvdnllldekg.glmlggftaLvragtkvvlseve.kgfaPpEllgsrggytrknktkm.thkldaWqlGlviyriwcl 246
                  q+++ +   +++g+ h +++++n+l  ++g ++ l +f+   +  +           +  pE + +       +k+k+   + d+W lG+v + + c 
   KHJ33482.1 153 QILNAVEFCHNLGIYHRDLKPENILVSNNGaKVLLADFGL-ATLDAISEDHGCGsTFYMSPECIDKS------KKVKFhCGPNDVWSLGVVLLNLTCG 243
                  78888889999***************99994599999984.44444444234442556899999983......3444414578*************** PP

  Kinase-like 247 klPltla 253
                  + P  +a
   KHJ33482.1 244 QNPWKQA 250
                  *998754 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   5.4e-06     0.012     119     167 ..     146     191 ..     127     200 .. 0.83
   2 ?   -2.9   0.0       1.5   3.5e+03      93     110 ..     366     383 ..     357     394 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 5.4e-06
         Kdo 119 lkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDld 167
                 l r ++ ++  +++  h++g++H+dl + nil+ +++   a++ l D+ 
  KHJ33482.1 146 LIRYIFGQILNAVEFCHNLGIYHRDLKPENILVSNNG---AKVLLADFG 191
                 5566677888889999******************998...999999985 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.5
         Kdo  93 lllterlegaqdLedlla 110
                 ++l+ +l++++dLe+  +
  KHJ33482.1 366 AILVNQLDQISDLETAGK 383
                 6899999*****998655 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   2.1e-05     0.047     167     205 ..     165     202 ..     153     214 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.1e-05
                 EEE-SS-SGGGEEEC..TTEEEEE---TT-EEEECCHHH CS
         APH 167 vllHgDlhpgNllvdpddgrvtGviDfedaglgpplyDl 205
                 ++ H+Dl+p N+lv  ++ +v  + Df++a+l  +  D 
  KHJ33482.1 165 GIYHRDLKPENILVSNNGAKV-LLADFGLATLDAISEDH 202
                 678************444444.588******99888885 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.8e-05     0.064     259     319 ..     129     185 ..     116     191 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.8e-05
  Pox_ser-thr_kin 259 kvkeeiaaelGfaslveyikfifLqiaLLyikiyelpdcenflhvDlkPdniLifdskekl 319
                      ++ ++i+++  f+s  + i++if qi    +   e        h DlkP+niL+ ++  k+
       KHJ33482.1 129 DLFTNITERGKFVSDDDLIRYIFGQIL-NAV---EFCHNLGIYHRDLKPENILVSNNGAKV 185
                      566777788889999*********873.333...443334579***********9997665 PP

>> Choline_kinase  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   3.7e-05     0.083     138     175 ..     151     194 ..      97     203 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.7e-05
                     HHCHGG-EEEE-S......--SGGGEEE.-CTTEEEE--GTT-E CS
  Choline_kinase 138 leelespvvfcHn......DlqegNillnkeekklvlIDFEYag 175
                     + ++ + v fcHn      Dl ++Nil++++  k+ l DF  a+
      KHJ33482.1 151 FGQILNAVEFCHNlgiyhrDLKPENILVSNNGAKVLLADFGLAT 194
                     4567778999998888888*********************7665 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   4.8e-05      0.11     185     257 ..     119     196 ..      35     211 .. 0.66
   2 ?   -3.8   1.0         2   4.5e+03       4      39 ..     412     447 ..     409     467 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.8e-05
  Haspin_kinase 185 flvlllkdkGtdLeev....klks.wkqalsifwqivkiLyvaE..tkfeFEHRdLhldniLvdkn.lnvtlidlklsRle 257
                    ++vl+  + G+  +++    k+ s  + +  if qi   L ++E   ++   HRdL+ +niLv +n  +v l d+ l+ l 
     KHJ33482.1 119 YVVLEYCEDGDLFTNItergKFVSdDDLIRYIFGQI---LNAVEfcHNLGIYHRDLKPENILVSNNgAKVLLADFGLATLD 196
                    556666666655555544232222022334455554...4444422688999***********999558999***999876 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 2
  Haspin_kinase   4 slsleslksrssqsslkhktshssLqkfsssssess 39 
                     + ++ ++++s ++ ++ k s+ s   +ss+s  ++
     KHJ33482.1 412 ASEFSDITNESNNEVVQSKNSQCSQSVLSSKSDYKA 447
                    555556666666677777777766666655554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (543 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       499  (0.027832); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 4040.99
//
Query:       KHJ33483.1  [L=235]
Description: putative ankyrin repeat domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-35  121.7   5.1      4e-14   53.0   0.1    3.9  3  Ank_2     Ankyrin repeats (3 copies)
    3.9e-32  109.9   4.6    7.9e-07   29.2   0.0    5.2  6  Ank_5     Ankyrin repeats (many copies)
    1.2e-28   99.1   7.2    1.6e-08   34.9   0.0    4.7  5  Ank_4     Ankyrin repeats (many copies)
    7.2e-26   87.4   0.7    0.00034   20.8   0.0    6.3  6  Ank_3     Ankyrin repeat
    6.1e-22   77.0   1.6      2e-06   28.0   0.0    6.2  6  Ank       Ankyrin repeat


Domain annotation for each model (and alignments):
>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.0   0.1   1.1e-17     4e-14       1      83 []       9     104 ..       9     104 .. 0.81
   2 !   38.9   0.2   2.8e-13   9.9e-10      11      82 ..      88     171 ..      86     172 .. 0.89
   3 !   44.6   0.1   4.4e-15   1.6e-11       1      83 []     111     205 ..     111     205 .. 0.84

  Alignments for each domain:
  == domain 1  score: 53.0 bits;  conditional E-value: 1.1e-17
       Ank_2   1 LhlAakngnlelvklLl..egadpn..k.ngktaLhyAakngnleivklLleh.......adndgrtpLhyAars..ghleivklLlekgadinlkd 83 
                 Lh Aa++g    v+ +l  + + +n  + +++ a+h+A++++++eiv lL++        +d +g+tpL++Aa+   g +eiv+lLl k+adin+k+
  KHJ33483.1   9 LHEAARDGRARDVESILneNPKLANqrDdDNRLAVHWAISSNQKEIVNLLVSTeyfdpdaQDGSGWTPLMIAASLkeG-EEIVDLLLGKNADINAKN 104
                 899***9977899999953222233443699********************9556676666688*********88855.5*******999****996 PP

  == domain 2  score: 38.9 bits;  conditional E-value: 2.8e-13
       Ank_2  11 elvklLl.egadpn.k..ngktaLhyAakngnleivklLleh........adndgrtpLhyAarsghleivklLlekgadinlk 82 
                 e+v+lLl ++ad+n k   g+taLh+ +++ n+++++ +l+h         d+ g  p+h Aa  g+  +v+lL+++++ in+ 
  KHJ33483.1  88 EIVDLLLgKNADINaKnfAGQTALHLIVSKKNIDLARRFLNHkpaasarlCDKRGLYPIHRAAAVGSVPLVELLIKHNSPINAA 171
                 79*****999999984699************9*********9999886666699*********99**********998888876 PP

  == domain 3  score: 44.6 bits;  conditional E-value: 4.4e-15
       Ank_2   1 LhlAakngnlelvklLl.eg..adpn....k.ngktaLhyAakngnleivklLleh......adndgrtpLhyAarsghleivklLlekgadinlkd 83 
                 Lhl ++++n +l + +l ++  a  +    +  g+ ++h Aa  g++ +v+lL++h      ad +g+tpLh+A+ +gh +++  Ll+ g+d +++d
  KHJ33483.1 111 LHLIVSKKNIDLARRFLnHKpaA--SarlcDkRGLYPIHRAAAVGSVPLVELLIKHnspinaADISGQTPLHHAIAEGHGDTALSLLKAGVDTKKRD 205
                 8999999989*******633342..23343258**********************99998777799*********************8899987765 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   2.4e-06    0.0084      18      54 ..       7      44 ..       2      46 .. 0.92
   2 !   14.9   0.0   6.8e-06     0.024      21      56 .]      44      80 ..      40      80 .. 0.94
   3 !   29.2   0.0   2.2e-10   7.9e-07       8      55 ..      65     113 ..      58     114 .. 0.90
   4 !   26.9   0.1   1.2e-09   4.3e-06       5      53 ..      95     146 ..      92     147 .. 0.94
   5 !   28.5   0.1   3.9e-10   1.4e-06      13      56 .]     139     182 ..     134     182 .. 0.94
   6 !   23.4   0.0   1.5e-08   5.5e-05      15      56 .]     174     215 ..     171     215 .. 0.96

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 2.4e-06
       Ank_5 18 tpLhvAakygaadvvrlLl.argadlnltdsrGltald 54
                 pLh Aa+ g+a+ v+ +l +++  +n++d+++++a++
  KHJ33483.1  7 FPLHEAARDGRARDVESILnENPKLANQRDDDNRLAVH 44
                69*******************************99986 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 6.8e-06
       Ank_5 21 hvAakygaadvvrlLl.argadlnltdsrGltaldlA 56
                h+A++ +  ++v+lL+  +  d++++d++G+t+l +A
  KHJ33483.1 44 HWAISSNQKEIVNLLVsTEYFDPDAQDGSGWTPLMIA 80
                9********************************9776 PP

  == domain 3  score: 29.2 bits;  conditional E-value: 2.2e-10
       Ank_5   8 dvnrldgggntpLhvAak.ygaadvvrlLlargadlnltdsrGltaldl 55 
                 d++++dg g tpL++Aa+ +   ++v lLl  +ad+n++++ G+tal+l
  KHJ33483.1  65 DPDAQDGSGWTPLMIAASlKEGEEIVDLLLGKNADINAKNFAGQTALHL 113
                 89999*************888888888888*****************97 PP

  == domain 4  score: 26.9 bits;  conditional E-value: 1.2e-09
       Ank_5   5 g.padvnrldgggntpLhvAakygaadvvrlLl..argadlnltdsrGltal 53 
                 g +ad+n+++  g+t+Lh+ +++ + d++r++l  ++ a+++l+d+rGl ++
  KHJ33483.1  95 GkNADINAKNFAGQTALHLIVSKKNIDLARRFLnhKPAASARLCDKRGLYPI 146
                 5589********************************************9997 PP

  == domain 5  score: 28.5 bits;  conditional E-value: 3.9e-10
       Ank_5  13 dgggntpLhvAakygaadvvrlLlargadlnltdsrGltaldlA 56 
                 d++g  p+h Aa  g+ ++v+lL+++++ +n+ d +G+t+l++A
  KHJ33483.1 139 DKRGLYPIHRAAAVGSVPLVELLIKHNSPINAADISGQTPLHHA 182
                 57789************************************998 PP

  == domain 6  score: 23.4 bits;  conditional E-value: 1.5e-08
       Ank_5  15 ggntpLhvAakygaadvvrlLlargadlnltdsrGltaldlA 56 
                  g+tpLh+A+  g+ d ++ Ll+ g+d++ +ds+ ++al+lA
  KHJ33483.1 174 SGQTPLHHAIAEGHGDTALSLLKAGVDTKKRDSDEKLALELA 215
                 689*************************************99 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.1   9.2e-06     0.033       4      55 .]       8      59 ..       8      59 .. 0.87
   2 !   29.2   0.0   2.8e-10     1e-06       2      43 ..      40      81 ..      39      86 .. 0.92
   3 !   21.1   0.1   9.6e-08   0.00034      11      54 ..      84     126 ..      80     127 .. 0.88
   4 !   26.1   0.1   2.5e-09   9.1e-06       3      55 .]     109     162 ..     108     162 .. 0.95
   5 !   34.9   0.0   4.4e-12   1.6e-08       4      49 ..     145     189 ..     142     197 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 9.2e-06
       Ank_4  4 aLhyaaisgrlelvrlLlekgad.inaqdnrsGetalhiAakrgnveilklLl 55
                +Lh aa +gr + v+++l+ ++   n + +++ + a+h A++ +++ei+ lL+
  KHJ33483.1  8 PLHEAARDGRARDVESILNENPKlANQR-DDDNRLAVHWAISSNQKEIVNLLV 59
                699***************7655526666.9999****************9996 PP

  == domain 2  score: 29.2 bits;  conditional E-value: 2.8e-10
       Ank_4  2 ltaLhyaaisgrlelvrlLlek.gadinaqdnrsGetalhiAa 43
                + a h+a++s++ e+v lL+++   d++aq ++sG+t+l iAa
  KHJ33483.1 40 RLAVHWAISSNQKEIVNLLVSTeYFDPDAQ-DGSGWTPLMIAA 81
                6789****************99559*****.***********8 PP

  == domain 3  score: 21.1 bits;  conditional E-value: 9.6e-08
       Ank_4  11 sgrlelvrlLlekgadinaqdnrsGetalhiAakrgnveilklL 54 
                 ++ +e+v+lLl k+adina  n  G+talh  +++ n++ ++ +
  KHJ33483.1  84 KEGEEIVDLLLGKNADINAK-NFAGQTALHLIVSKKNIDLARRF 126
                 66689**************9.999*************9998866 PP

  == domain 4  score: 26.1 bits;  conditional E-value: 2.5e-09
       Ank_4   3 taLhyaaisgrlelvrlLlekgadinaq.dnrsGetalhiAakrgnveilklLl 55 
                 taLh  +++ +++l+r+ l++++   a+ ++++G+ ++h+Aa  g+v  ++lL+
  KHJ33483.1 109 TALHLIVSKKNIDLARRFLNHKPAASARlCDKRGLYPIHRAAAVGSVPLVELLI 162
                 79********************99888889***********************8 PP

  == domain 5  score: 34.9 bits;  conditional E-value: 4.4e-12
       Ank_4   4 aLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAakrgnve 49 
                 ++h+aa+ g ++lv+lL+ ++  ina  ++sG+t+lh+A+  g+ +
  KHJ33483.1 145 PIHRAAAVGSVPLVELLIKHNSPINAA-DISGQTPLHHAIAEGHGD 189
                 79************************8.************999965 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.0    0.0041        15       5      23 ..       8      26 ..       5      32 .. 0.80
   2 !    9.4   0.0   0.00049       1.8       2      30 ..      39      67 ..      38      68 .. 0.83
   3 !   20.8   0.0   9.6e-08   0.00034       2      31 .]      73     102 ..      72     102 .. 0.95
   4 !   12.1   0.0   6.6e-05      0.24       2      26 ..     107     131 ..     106     135 .. 0.89
   5 !   16.5   0.0   2.5e-06    0.0088       2      31 .]     142     170 ..     141     170 .. 0.92
   6 !   14.5   0.0   1.1e-05     0.039       2      28 ..     175     200 ..     174     202 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0041
       Ank_3  5 pLhlAarsgnl.eivkfLle 23
                pLh+Aar g+  + v+ +l+
  KHJ33483.1  8 PLHEAARDGRArD-VESILN 26
                9*********944.777776 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00049
       Ank_3  2 GetpLhlAarsgnleivkfLlenkgadvn 30
                ++ + h+A++s+  eiv +L+     d++
  KHJ33483.1 39 NRLAVHWAISSNQKEIVNLLVSTEYFDPD 67
                67789***************986666665 PP

  == domain 3  score: 20.8 bits;  conditional E-value: 9.6e-08
       Ank_3   2 GetpLhlAarsgnle.ivkfLlenkgadvna 31 
                 G+tpL++Aa+    e iv++Ll  k+ad+na
  KHJ33483.1  73 GWTPLMIAASLKEGEeIVDLLLG-KNADINA 102
                 9*************87*******.9****96 PP

  == domain 4  score: 12.1 bits;  conditional E-value: 6.6e-05
       Ank_3   2 GetpLhlAarsgnleivkfLlenkg 26 
                 G+t+Lhl ++  n+++++ +l++k 
  KHJ33483.1 107 GQTALHLIVSKKNIDLARRFLNHKP 131
                 9*********************765 PP

  == domain 5  score: 16.5 bits;  conditional E-value: 2.5e-06
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgadvna 31 
                 G +p+h+Aa  g++++v++L++ ++ ++na
  KHJ33483.1 142 GLYPIHRAAAVGSVPLVELLIK-HNSPINA 170
                 899*******************.8988885 PP

  == domain 6  score: 14.5 bits;  conditional E-value: 1.1e-05
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgad 28 
                 G+tpLh+A+  g+ + +  Ll+  g+d
  KHJ33483.1 175 GQTPLHHAIAEGHGDTALSLLK-AGVD 200
                 9*************99999999.7887 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.16   5.7e+02       5      13 ..       8      16 ..       6      36 .. 0.74
   2 !    9.2   0.0   0.00049       1.8       6      31 ..      43      70 ..      38      71 .. 0.84
   3 !   28.0   0.0   5.5e-10     2e-06       2      31 ..      73     104 ..      72     105 .. 0.84
   4 !    8.3   0.0   0.00095       3.4       2      23 ..     107     129 ..     106     138 .. 0.79
   5 !   13.3   0.1   2.5e-05     0.089       2      31 ..     142     172 ..     141     173 .. 0.89
   6 !   10.2   0.0   0.00023      0.84       2      14 ..     175     187 ..     174     206 .. 0.69

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.16
                HHHHHHHHT CS
         Ank  5 PLHlAatng 13
                PLH Aa+ g
  KHJ33483.1  8 PLHEAARDG 16
                9****9544 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00049
                HHHHHHHTTHHHHHHHH.TT.TSTTCBT CS
         Ank  6 LHlAatngkkriiklLL.hG.Anlnald 31
                 H+A++ ++k+i+ lL+     +++a+d
  KHJ33483.1 43 VHWAISSNQKEIVNLLVsTEyFDPDAQD 70
                5****9999********53347999998 PP

  == domain 3  score: 28.0 bits;  conditional E-value: 5.5e-10
                 SBBHHHHHH.HHTTHHHHHHHH.TTTSTTCBT CS
         Ank   2 GnTPLHlAa.tngkkriiklLL.hGAnlnald 31 
                 G+TPL++Aa    +++i+ lLL + A++na++
  KHJ33483.1  73 GWTPLMIAAsLKEGEEIVDLLLgKNADINAKN 104
                 9******99544559*******555*****98 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.00095
                 SBBHHHHHHHHTTHHHHHHHH.T CS
         Ank   2 GnTPLHlAatngkkriiklLL.h 23 
                 G T+LHl ++ ++ + ++ +L h
  KHJ33483.1 107 GQTALHLIVSKKNIDLARRFLnH 129
                 99*****7888888888888755 PP

  == domain 5  score: 13.3 bits;  conditional E-value: 2.5e-05
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnlnald 31 
                 G +P H+Aa  g++  ++lL+ h + +na d
  KHJ33483.1 142 GLYPIHRAAAVGSVPLVELLIkHNSPINAAD 172
                 889****99999999******9987789988 PP

  == domain 6  score: 10.2 bits;  conditional E-value: 0.00023
                 SBBHHHHHHHHTT CS
         Ank   2 GnTPLHlAatngk 14 
                 G TPLH A+ +g+
  KHJ33483.1 175 GQTPLHHAIAEGH 187
                 99******97777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       317  (0.0176809); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1750.21
//
Query:       KHJ33484.1  [L=245]
Description: putative mannose phospho-dolichol synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-32  113.1   0.0    1.4e-32  112.8   0.0    1.1  1  Glycos_transf_2  Glycosyl transferase family 2
      4e-11   43.2   0.0    6.4e-11   42.6   0.0    1.3  1  Glyco_tranf_2_3  Glycosyltransferase like family 2
    1.3e-06   28.1   0.0    1.9e-06   27.6   0.0    1.2  1  Glyco_tranf_2_2  Glycosyltransferase like family 2
     0.0084   15.6   0.0      0.015   14.8   0.0    1.3  1  Glyco_transf_21  Glycosyl transferase family 21


Domain annotation for each model (and alignments):
>> Glycos_transf_2  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.8   0.0   3.1e-36   1.4e-32       1     169 [.      10     183 ..      10     184 .. 0.96

  Alignments for each domain:
  == domain 1  score: 112.8 bits;  conditional E-value: 3.1e-36
                      EEEEEESS-TTTHHHHHHHHHHH...GGCCEEEEEEEEES-SSCHHHHHGGGCH.C-TTEEEEEESSS-HHHHHHHHHHHH--SSEEEEEESSE CS
  Glycos_transf_2   1 svviptyNeektlletlesllaq...dpypdfeiivvDDgStDetveileelak.edprvrvirreenvGkagalnaglraatgdyilflDaDd 90 
                      sv+ ptyNe  +l+  +  ll+    + y+++e+i+vDDgS+D+t++++ +l k + p+v++  r+ + G+++a+ +gl++atg++++++DaD 
       KHJ33484.1  10 SVILPTYNERRNLPVITW-LLNKtftEQYLNWELIIVDDGSPDGTQAVANQLIKaYAPHVILKPRPGKLGLGTAYVHGLKYATGNFVIIMDADF 102
                      8********999999999.77777999******************************************************************* PP

                      EE-TTHHHHHHHHHHH.....TTCEEEEEEEEEECCCCCCCHC-SSEEEECCHCCCCHCCCCCCSTTCSTCCCEEEEHHHHHC CS
  Glycos_transf_2  91 epdpdwleklvealekd....gadvvlgqrprifgetdeiernkrvgenerlyfkerkrslkgnlsfeigsaallrrealeel 169
                       ++p+++ +++ + +      g+d+v g+r++ +g+ + +   ++    +r+ +   + +l +++++ +gs++l+++++l+++
       KHJ33484.1 103 SHHPKFILRMISKQKTLssngGYDIVTGTRYAGDGGVYGWDLKRK--IVSRGANLFADTFLRPGVTDLTGSFRLYKKSVLQKV 183
                      ************998877777********************9997..7********************************997 PP

>> Glyco_tranf_2_3  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6   0.0   1.4e-14   6.4e-11       4     205 ..       9     213 ..       6     225 .. 0.80

  Alignments for each domain:
  == domain 1  score: 42.6 bits;  conditional E-value: 1.4e-14
  Glyco_tranf_2_3   4 lavlVptfneed...vlgevlesllaqeyprvevvvvvdesdaetlevaeelaaalpdvrvrvvvnarnlgstgksralnealravksdlvllv 94 
                      ++v+ pt+ne +   v++ +l+ + + +y + e+++v+d+s ++t +va +l +a+     +v+ ++r +g+ g  +a++++l+ +++ +v+++
       KHJ33484.1   9 YSVILPTYNERRnlpVITWLLNKTFTEQYLNWELIIVDDGSPDGTQAVANQLIKAYAP---HVILKPR-PGKLGLGTAYVHGLKYATGNFVIIM 98 
                      79********9988888889999999999***********************999965...5788999.8999********************* PP

  Glyco_tranf_2_3  95 DdDtvvePdt.lkrllqff.ltp..kvgavgtpvfllnrstl.vsalgalefaerhlrflaar..ralgvltlnGsgslirrevlkelegldpl 181
                      D+D   +P + l+++  +  l++  ++++v++ +++  +  + ++ l + ++  r + +l+a+  ++ gv+ l+Gs+ l+  +vl+    ++++
       KHJ33484.1  99 DADFSHHPKFiLRMISKQKtLSSngGYDIVTGTRYAGDGGVYgWD-LKR-KIVSRGA-NLFADtfLRPGVTDLTGSFRLYKKSVLQKVIESTES 189
                      **********4455555546455789*****99999887766344.333.3333333.222221246789999999999999999999888887 PP

  Glyco_tranf_2_3 182 flltdDyelglrlrragfrtayvp 205
                      +  t   e+ +r+++ g  +a vp
       KHJ33484.1 190 KGYTFQMEMMVRAKAMGCTVAEVP 213
                      888888899999888888777665 PP

>> Glyco_tranf_2_2  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.0   4.1e-10   1.9e-06       1     112 [.      10     120 ..      10     134 .. 0.80

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 4.1e-10
  Glyco_tranf_2_2   1 svviplraseerhyieervlqkakyy.deeielivvddgSsekfleevssii.dlnllvylkdeddkayslaaarNrGaskaesdlvlFlDaDc 92 
                      sv++p ++++++  +   +l+k++     + eli+vddgS++ +  + +++i +   +v lk  + k  +l+ a   G ++a +++v+ +DaD 
       KHJ33484.1  10 SVILPTYNERRNLPVITWLLNKTFTEqYLNWELIIVDDGSPDGTQAVANQLIkAYAPHVILKPRPGK-LGLGTAYVHGLKYATGNFVIIMDADF 102
                      79**********9999999999986434689************999888765156678899998766.788899999****************7 PP

  Glyco_tranf_2_2  93 fissDkfekilklitikklr 112
                         +  + ++++  + k l+
       KHJ33484.1 103 SHHPKFILRMIS--KQKTLS 120
                      766666666655..555555 PP

>> Glyco_transf_21  Glycosyl transferase family 21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   3.2e-06     0.015      23     116 ..      84     183 ..      76     192 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 3.2e-06
  Glyco_transf_21  23 lqaleaakydllvisDsdvrvkpdyLeellaaled....pkvglVtslpvgsdakglaaaleaaflntlagvlqa.kls.glgfavGksmalrr 110
                      +++l++a  ++++i D+d    p+++ ++  + ++     +  +Vt++ ++ d    + +l++ +++ +a++++  +l  g+   +G++ ++++
       KHJ33484.1  84 VHGLKYATGNFVIIMDADFSHHPKFILRMISKQKTlssnGGYDIVTGTRYAGDGGVYGWDLKRKIVSRGANLFADtFLRpGVTDLTGSFRLYKK 177
                      789999***********************98754333257899************9999*******9999999996554599************ PP

  Glyco_transf_21 111 eaLeai 116
                      ++L+++
       KHJ33484.1 178 SVLQKV 183
                      ***986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1743.89
//
Query:       KHJ33485.1  [L=298]
Description: hypothetical protein EV44_g5917 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0071   15.8   0.9     0.0095   15.4   0.9    1.2  1  SAC3_GANP        SAC3/GANP family
  ------ inclusion threshold ------
      0.046   13.7   0.1      0.083   12.9   0.1    1.4  1  CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family


Domain annotation for each model (and alignments):
>> SAC3_GANP  SAC3/GANP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.9   1.1e-06    0.0095     138     256 ..     132     249 ..      96     272 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.1e-06
                 -CHHHHHHHHHHHHHHHHHHHHHH....---TTHHHHHHHHHHHTTT-HHHHHHHCTS.-HHHHTSHHHHHHHHHHHHH--TTHHHHHHHHTTS-HHHH CS
   SAC3_GANP 138 deqqnleqLqkclqsLlelYddlrkkk.eelpneaefrayylLlnlrdpdilrevqel.pseilkspevqlalklvaalqennyvrffklvkevsylqa 234
                    + +++++   + +l+l + ++  +   +++++ef++y +L  + ++d l+e+  + ++  ++++++  +    +al+++n+  f+k+ ++v    a
  KHJ33485.1 132 RLSISIKHMESFHTAILHLLKSMHPVQpLASTEKQEFVSYLVLDLACRQDELAEAYFVrNQYQIHDTKIDAV---LKALTHDNFFLFWKVKRTVDGHRA 227
                 5567788888888888999999987777888999*********66666666666555515555667777655...6899******************** PP

                 HHHGGGHHHHHHHHHHHHHHHS CS
   SAC3_GANP 235 cllerhfnevRrkalkalsray 256
                  l+e   +e+R++ lk+l r+y
  KHJ33485.1 228 KLMEFAEDELRKQTLKCLGRSY 249
                 *********************9 PP

>> CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   9.3e-06     0.083      45     108 ..     201     262 ..     168     273 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 9.3e-06
  CSN8_PSD8_EIF3K  45 ltLetlLeeanyakfwstlksddlsadltadvagl.eelvReeiaklvgkaYesIsadvlaelLg 108
                       ++ ++L   n+  fw+ +k +   +   a+  ++ e+  R++++k++g++Y  +    l+++++
       KHJ33485.1 201 DAVLKALTHDNFFLFWK-VKRT-V-DGHRAKLMEFaEDELRKQTLKCLGRSYLIMDLPSLEKYTQ 262
                      567899***********.7765.4.55555555555****************9998888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2340.59
//
Query:       KHJ33486.1  [L=245]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1974.39
//
Query:       KHJ33487.1  [L=670]
Description: putative duf803 domain membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.6e-60  202.2  11.6    1.4e-58  198.3   5.7    2.1  2  Mg_trans_NIPA  Magnesium transporter NIPA
      2e-05   24.8  20.3    5.3e-05   23.4   0.2    3.1  3  EamA           EamA-like transporter family
  ------ inclusion threshold ------
      0.016   14.7   0.2      0.016   14.7   0.2    2.0  2  SLC35F         Solute carrier family 35
      0.099   12.6   7.8        5.7    6.9   0.0    2.9  2  DUF4345        Domain of unknown function (DUF4345)


Domain annotation for each model (and alignments):
>> Mg_trans_NIPA  Magnesium transporter NIPA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.3   0.00048       2.2       4      34 ..      49      79 ..      47      89 .. 0.88
   2 !  198.3   5.7   3.2e-62   1.4e-58      45     292 ..     140     384 ..     121     387 .. 0.96

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00048
  Mg_trans_NIPA  4 liGvlLavssslfigssfilkkkgllrlark 34
                   +iG+  a+s++++i+ ++++++ +++++ ++
     KHJ33487.1 49 TIGIFTAISGNILISFALNIQRLAHIKIHER 79
                   689***********************98765 PP

  == domain 2  score: 198.3 bits;  conditional E-value: 3.2e-62
  Mg_trans_NIPA  45 aylkevlWwaGlltmavGeaanfaayafaPatLvtPLGalsvivsavlasllLkekLkllgllGcllailGstvlvihaPkeeeieslkevadllv 140
                    +yl +++Ww G+ +m++Gea+nf ay+faPa++v+PLG +++i   v+a +lLkek++l +  G+++ai+G++++v+ a +ee+    +e+ + + 
     KHJ33487.1 140 SYLCSPYWWIGIFLMTLGEAGNFLAYGFAPASIVSPLGVVAIISNCVIAPILLKEKFRLRDFWGVIVAIAGAITVVMSAKQEEQKLGPHEIIEAIL 235
                    7*********************************************************************************************** PP

  Mg_trans_NIPA 141 dpaflvyvilvvvvvlvlilyveprkGktnilvyitlcsllgsltvisvkalgiaikltlaGkaqlkyalawilllvlvicvvlqinyLnkaldif 236
                      +f vy+++++   + ++   +pr+G + i + ++l+ llg +t +s k+l+ ++  tl     l +++ ++l+lvl+ + vlq++yLnkal+ f
     KHJ33487.1 236 RTEFKVYMVVTL-FLIGILAWASPRYGGKTIFIDLGLVGLLGGYTALSTKGLSSMLSSTLW--RALATPISYMLILVLIGTAVLQVRYLNKALQQF 328
                    **********99.6677888899*********************************99995..789****************************** PP

  Mg_trans_NIPA 237 ntsivtPvyyvlfttlvivasailfkefleasvddvlgelsGfllvllgvfllhat 292
                    + + v Pv y+ ft +vi+ s il+++  + sv++ +  + G+ll +lgv l+++ 
     KHJ33487.1 329 DSTQVIPVQYLTFTLSVIIGSTILYRDMDKISVENAVKFMGGCLLAFLGVWLITSG 384
                    ****************************************************9875 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.2       2.4   1.1e+04     119     136 ..      46      63 ..      43      66 .. 0.76
   2 !   23.4   0.2   1.2e-08   5.3e-05      70     136 ..     149     215 ..     132     216 .. 0.94
   3 !    8.7   9.3   0.00043       1.9      61     135 ..     299     381 ..     243     383 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.4
        EamA 119 lkqllgivlillGvllil 136
                 +++ +gi+ ++ G +li+
  KHJ33487.1  46 WSSTIGIFTAISGNILIS 63 
                 677788888888887776 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 1.2e-08
        EamA  70 lgllgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvllil 136
                 +g++ ++l+    f a    +as++s++  ++ +   +++ +ll+ek+ l+++ g++++++G++ ++
  KHJ33487.1 149 IGIFLMTLGEAGNFLAYGFAPASIVSPLGVVAIISNCVIAPILLKEKFRLRDFWGVIVAIAGAITVV 215
                 7999999********************************************************9887 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.00043
        EamA  61 lkdwllllllgllgtvlaf.llffyalkktsasnaslitslePvftlilsvlllgekltlkq.......llgivlillGvlli 135
                  +++ ++l+l l+gt++ +   +++al+  +++++ ++++l+  +++i+++ +l   + +++       + g++l++lGv+li
  KHJ33487.1 299 ATPISYMLILVLIGTAVLQvRYLNKALQQFDSTQVIPVQYLTFTLSVIIGSTILYRDMDKISvenavkfMGGCLLAFLGVWLI 381
                 466788999999*******445689*****************************99998876111111145667777777766 PP

>> SLC35F  Solute carrier family 35
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.2   3.6e-06     0.016      73     147 ..     147     218 ..     136     231 .. 0.86
   2 ?   -0.4   0.5      0.15   6.7e+02      79     125 ..     269     320 ..     223     373 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 3.6e-06
      SLC35F  73 wykylllalvdveanylvvkayqytsltsvqlldcfaipvvlvlswlflkvryrlvkiigvvvcilGvvllvvsd 147
                 w+  ++l  +   +n+l   ay ++    v+ l   ai    v++ ++lk ++rl  + gv+v i+G +++v+s 
  KHJ33487.1 147 WWIGIFLMTLGEAGNFL---AYGFAPASIVSPLGVVAIISNCVIAPILLKEKFRLRDFWGVIVAIAGAITVVMSA 218
                 77777777777778886...888888888999999************************************9985 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.15
      SLC35F  79 lalvdveanylvvkayqytsltsvqlldcfaipvvlvlswl.....flkvry 125
                 l+lv + + y  + +    s++s +l  + a+p+  +l  +     +l+vry
  KHJ33487.1 269 LGLVGLLGGYTALSTKGLSSMLSSTLWRALATPISYMLILVligtaVLQVRY 320
                 5666666666666666666666666666666654322222200111444554 PP

>> DUF4345  Domain of unknown function (DUF4345)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   5.4    0.0056        25      11     117 ..     204     310 ..     200     312 .. 0.81
   2 ?    6.9   0.0    0.0013       5.7      35      66 ..     355     386 ..     336     391 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0056
     DUF4345  11 lvliaiGllgllagaaliag.avgvelenatldselRflaglllglGllllwaipriekrraalrllalviflgglgRliSlaldglpsaflivalvvE 108
                 +++++ G+  ++  a++ +  + + e  +a l++e++ ++++ l l  +l+wa pr    ++ ++ l+lv +lgg   l +  l  + s  l+ al+  
  KHJ33487.1 204 VIVAIAGAITVVMSAKQEEQkLGPHEIIEAILRTEFKVYMVVTLFLIGILAWASPRY-GGKTIFIDLGLVGLLGGYTALSTKGLSSMLSSTLWRALATP 301
                 5555555555555555555556677888999*************************9.78889999999999999999999999999999999999998 PP

     DUF4345 109 lvlapllll 117
                 +  +++l+l
  KHJ33487.1 302 ISYMLILVL 310
                 888888776 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0013
     DUF4345  35 elenatldselRflaglllglGllllwaipri 66 
                 + +++++++ ++f++g+ll++  ++l++  r+
  KHJ33487.1 355 DMDKISVENAVKFMGGCLLAFLGVWLITSGRP 386
                 46789*************99999999987776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (670 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       881  (0.0491383); expected 358.6 (0.02)
Passed bias filter:                      579  (0.032294); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.42
# Mc/sec: 4747.62
//
Query:       KHJ33488.1  [L=486]
Description: putative caf1 family ribonuclease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-14   54.3   0.0    1.5e-07   30.9   0.0    2.2  2  CAF1      CAF1 family ribonuclease


Domain annotation for each model (and alignments):
>> CAF1  CAF1 family ribonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.0   7.1e-09   0.00013       5      82 ..     118     219 ..     114     257 .. 0.68
   2 !   30.9   0.0   8.4e-12   1.5e-07     214     319 .]     280     382 ..     274     382 .. 0.66

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 7.1e-09
                 GHHHHHHHHHHHHHH-SEEEEEEEES-SS-----------HHHHHHHHHHHTTTB-EEEEEEEEEEEETTTTE.......................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......................... RF
        CAF1   5 NfkellpeilkaikeasFvAiDlEftGlsegerkesladsleerYeklkqaaesfsilqlGlscfsedkekkek......................... 78 
                 N++e ++ +++   ++ +vA+  Ef G+  ++     +   + +Y+ ++ ++   ++ qlG+s+f+ed e+                            
  KHJ33488.1 118 NLHEEIDLLRRIAVSCPYVAMNAEFPGV-VARPMGAFNGRSDYHYQCMRCNVDLINMYQLGISLFTEDGESPPPiiqssalgmdstearkygpvihipt 215
                 5566665555555699***********9.4666777888999***********************9888876557778888888666666666665555 PP

                 .EEE CS
                 xxxx RF
        CAF1  79 eykv 82 
                 +++ 
  KHJ33488.1 216 TWQF 219
                 4444 PP

  == domain 2  score: 30.9 bits;  conditional E-value: 8.4e-12
                 THHHHHHHHHHH.T----SSHHHHHHHHHHH-SSEEEHHHHHTSTTTTTT-S--SHHHH......HHHTTSTTS--.......--EEE-TTS------. CS
                 xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
        CAF1 214 gllDllflyqtf.yaeLPesleeFkaklselFPgiiDtKylakneelearleassLeel......feklkkenskskdassseekkesekkkaasees. 304
                 g +Dl +l + + + +LP++   F + ++++FP+++D Kyl+k     ++ ++++L +l       ++l  + + ++      ++ ++         + 
  KHJ33488.1 280 GAYDLGHLTKVLsVLPLPDDETGFDTIMKKFFPSVFDIKYLIK-----EAIRRHQLGQLtpldsgTNELMAKLEAKPG----LDHLADCL-------Kv 362
                 568*******998999**************************4.....233444444442222224444333333322....11111111.......12 PP

                 .....---HHHHHHHHHHHH CS
                 .....xxxxxxxxxxxxxxx RF
        CAF1 305 .....aHeAGyDafmTGlvf 319
                      +H+AG  +++TG +f
  KHJ33488.1 363 krvgpQHQAGSNSLLTGKLF 382
                 223459***********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 3827.54
//
Query:       KHJ33489.1  [L=73]
Description: hypothetical protein EV44_g5320 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       197  (0.0109878); expected 358.6 (0.02)
Passed bias filter:                      182  (0.0101512); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.22s 00:00:00.54 Elapsed: 00:00:00.35
# Mc/sec: 622.26
//
Query:       KHJ33490.1  [L=1025]
Description: putative arm repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-38  130.3  10.7    4.2e-37  127.5   1.4    3.7  3  Xpo1      Exportin 1-like protein
    0.00084   19.4   0.0        8.5    6.9   0.0    4.8  5  HEAT      HEAT repeat
  ------ inclusion threshold ------
      0.017   15.1   1.4       0.68    9.9   0.3    3.7  3  FerA      FerA (NUC095) domain


Domain annotation for each model (and alignments):
>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.5   1.4   7.1e-41   4.2e-37       1     141 [.     103     250 ..     103     265 .. 0.90
   2 !    5.5   1.3    0.0028        17      46     130 ..     285     382 ..     263     387 .. 0.57
   3 ?   -0.1   0.0      0.15     9e+02      28     120 ..     641     747 ..     638     769 .. 0.71

  Alignments for each domain:
  == domain 1  score: 127.5 bits;  conditional E-value: 7.1e-41
                 THHHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCT........HHHHHHHHHHHHHHHHHHHT..SHTTTSCHHHHHHHHHHHHHH.HHHHHHHHHH CS
        Xpo1   1 pkflrnklaealaelflqeypnnWpsffddllsllsss.......psglelllriLkvlpeEiad..fsrskleqerrndlkdllrsn.vqkilelllq 89 
                 p++++nkl ++l+ lf++ y + W+sffd +l l+  +        +g++l+lriL ++++Ei+d  +srs++ ++ +++lkd++r++ v+ki++++++
  KHJ33490.1 103 PAHIQNKLTQTLTLLFMKSYKHGWESFFDYFLTLTCFQndgvrnnIKGTMLYLRILGSIHDEIGDvhISRSNEDNRCNSELKDAMRARdVPKIVSSWQE 201
                 689*****************************7765444588888999******************99999998888********************** PP

                 HHHHHHHCCHHHHHHHHHHHHHHHHTTTS-HHHHHTSCHHHHHHHHCCSCCC CS
        Xpo1  90 ileqsqskkqsselveavLkclsswvswidiglivnnpllnllfqlLsdpel 141
                 il ++q++   +++ve +Lk++++wvswidi+li+n++lln+lfq++++ + 
  KHJ33490.1 202 ILTYWQNQ---DDVVETCLKVIGKWVSWIDISLIMNQDLLNTLFQFVGQNNQ 250
                 ******97...8***********************************54443 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0028
                 HHHHHHHHHHHHT..SHTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC......HHHHHHHHHHHHHHHHTT....TS-HHHHHT.SCHHH CS
        Xpo1  46 lriLkvlpeEiad..fsrskleqerrndlkdllrsnvqkilelllqileqsqskk......qsselveavLkclsswvs....widiglivn.nplln 130
                 l++  v+++ i +   ++ + +++ ++dl ++ ++ ++ +++ + +il++ q+++      q ++l+++ L  l +++s    +i  + i + +++l+
  KHJ33490.1 285 LNLGEVISQLIRSppLHELRTTSSYDTDLAETVAKLINNVISDVVKILDEAQNQSqtevqmQAQQLIQSFLPLLLRFLSdeydEICSTVIPSlTEFLT 382
                 44444555555445433333334445555555555455555555555555554444455999999999999999999987666666666666555555 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.15
                 HHHHHHHHCT.HHHHHHHHHHHHHHHHHHHTSHTTTSCHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHCC.............HHHHHHHHHHHHHH CS
        Xpo1  28 fddllsllssspsglelllriLkvlpeEiadfsrskleqerrndlkdllrsn.vqkilelllqileqsqskk.............qsselveavLkcls 112
                 f+++ s +s+ ++ +e+     +++ e +++  + + e ++  +l+  l+++ v++ l  l +  ++++ k+             + ++++e +L  l+
  KHJ33490.1 641 FESIGSISSATEIPVENQVLYVRTIIEPLFSEIERNIEPSKSGNLQSILQVHhVMMALGYLAHGFSAWVPKNatallapskvvreEFARVAEVILISLE 739
                 555556666666666666666677777777744468889999999999999999999999999999999888777777666666655666666665555 PP

                 HHTTTS-H CS
        Xpo1 113 swvswidi 120
                 +  s +di
  KHJ33490.1 740 ALKSSFDI 747
                 55555555 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       2.2   1.3e+04      15      28 ..     211     224 ..     208     226 .. 0.79
   2 ?    0.4   0.0      0.18   1.1e+03      13      28 ..     254     269 ..     247     271 .. 0.87
   3 !    6.9   0.0    0.0014       8.5       1      29 [.     354     382 ..     354     384 .. 0.90
   4 !    5.2   0.0    0.0053        32       2      31 .]     558     587 ..     557     587 .. 0.91
   5 ?   -2.4   0.1       1.5   8.7e+03      15      28 ..     746     759 ..     739     762 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 2.2
                 HHHHHHHHHHHHHH CS
        HEAT  15 eVReaAakaLgala 28 
                 +V e+++k +g+ +
  KHJ33490.1 211 DVVETCLKVIGKWV 224
                 78999999999866 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.18
                 SHHHHHHHHHHHHHHH CS
        HEAT  13 speVReaAakaLgala 28 
                 + +VR+ A+ ++++++
  KHJ33490.1 254 DGKVRDIAIGTFTEIV 269
                 669*********9997 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0014
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 +lPlll+ lsD+  e+ ++++ +L++++ 
  KHJ33490.1 354 FLPLLLRFLSDEYDEICSTVIPSLTEFLT 382
                 69****************99999998875 PP

  == domain 4  score: 5.2 bits;  conditional E-value: 0.0053
                 HHHHHHHHT-SSHHHHHHHHHHHHHHHHCS CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgalaevl 31 
                 l  +++  ++++ +VR  A + + +++++l
  KHJ33490.1 558 LEQFVQFVHHSHIRVRTRAWYLFSRFVKHL 587
                 77889999*******************986 PP

  == domain 5  score: -2.4 bits;  conditional E-value: 1.5
                 HHHHHHHHHHHHHH CS
        HEAT  15 eVReaAakaLgala 28 
                 ++R aA  ++ +l+
  KHJ33490.1 746 DIRTAARACFSRLM 759
                 69999999999987 PP

>> FerA  FerA (NUC095) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.3   0.00011      0.68       8      39 ..     310     340 ..     306     350 .. 0.86
   2 ?    0.9   0.0     0.073   4.4e+02       4      29 ..     505     530 ..     503     541 .. 0.84
   3 ?   -1.6   0.0      0.46   2.7e+03      10      28 ..     785     803 ..     777     808 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00011
        FerA   8 eeelaslvlklLdqlieDcskpLpelegkpnv 39 
                 +++la++v+kl++++i+D+ k L e ++++ +
  KHJ33490.1 310 DTDLAETVAKLINNVISDVVKILDEAQNQS-Q 340
                 689*****************9999998776.4 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.073
        FerA   4 AkvseeelaslvlklLdqlieDcskp 29 
                 A v++e+la l+ k++d  i++  +p
  KHJ33490.1 505 ASVAAERLAVLISKMIDAGIASYTHP 530
                 78999************999987666 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.46
        FerA  10 elaslvlklLdqlieDcsk 28 
                 +  ++ l lLdq++ + +k
  KHJ33490.1 785 DEVAMSLRLLDQVVFSFKK 803
                 44567899****9987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1025 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       962  (0.0536561); expected 358.6 (0.02)
Passed bias filter:                      674  (0.0375927); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.79u 0.28s 00:00:01.07 Elapsed: 00:00:00.45
# Mc/sec: 6841.45
//
Query:       KHJ33491.1  [L=554]
Description: putative cytosolic j-domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      5e-38  126.1   9.6      1e-05   25.3   0.3    8.9  8  TPR_2            Tetratricopeptide repeat
    6.1e-36  120.8  13.5    3.9e-08   32.8   0.5    8.2  8  TPR_1            Tetratricopeptide repeat
      2e-27   94.6  14.2    1.9e-06   27.5   0.1    7.4  7  TPR_11           TPR repeat
    5.8e-27   93.6   5.1    9.6e-27   92.9   3.6    2.2  2  DnaJ             DnaJ domain
      1e-23   83.6   4.3    3.7e-06   27.5   0.0    6.3  6  TPR_16           Tetratricopeptide repeat
    3.8e-18   65.8  16.3     0.0023   18.4   0.1    6.6  6  TPR_19           Tetratricopeptide repeat
    3.7e-17   61.6  11.3    0.00017   22.1   0.0    8.7  8  TPR_14           Tetratricopeptide repeat
    5.1e-17   60.6  16.9     0.0039   17.3   0.2    8.5  8  TPR_8            Tetratricopeptide repeat
    8.9e-17   61.2  14.2    5.6e-05   23.3   1.1    6.3  6  TPR_12           Tetratricopeptide repeat
    1.2e-13   50.4  13.7      0.001   19.3   0.4    7.8  7  TPR_17           Tetratricopeptide repeat
    1.9e-13   50.4   6.8    2.6e-05   24.4   0.4    4.7  5  ANAPC3           Anaphase-promoting complex, cyclosome, subun
    2.2e-13   50.2   8.7    0.00028   21.0   0.0    5.4  6  TPR_9            Tetratricopeptide repeat
    1.7e-12   46.4  16.3      0.026   14.5   0.0    7.4  7  TPR_7            Tetratricopeptide repeat
    1.7e-07   30.8   6.2      0.011   14.9   0.0    3.6  3  TPR_15           Tetratricopeptide repeat
      2e-07   31.2  19.6        1.1   10.1   0.0    8.5  8  TPR_6            Tetratricopeptide repeat
    0.00016   22.1   3.5        1.9    8.9   0.1    4.4  4  BTAD             Bacterial transcriptional activator domain
    0.00018   21.3  17.1        0.6   10.1   0.0    6.8  6  TPR_10           Tetratricopeptide repeat
     0.0012   18.4  11.2      0.017   14.5   1.6    3.2  3  SNAP             Soluble NSF attachment protein, SNAP
     0.0017   18.8   2.0       0.92   10.3   0.0    4.2  3  TPR_4            Tetratricopeptide repeat
     0.0023   17.3   1.1       0.64    9.5   0.0    4.1  3  SHNi-TPR         SHNi-TPR
     0.0079   16.2   6.9          3    8.0   0.1    4.5  4  MIT              MIT (microtubule interacting and transport) 
  ------ inclusion threshold ------
       0.01   15.2   0.2        3.1    7.1   0.0    3.0  3  Coatomer_E       Coatomer epsilon subunit
      0.012   15.9  10.4        2.4    8.5   0.1    4.8  5  TPR_20           Tetratricopeptide repeat
      0.013   15.6  10.9        2.2    8.4   0.2    5.2  5  Fis1_TPR_C       Fis1 C-terminal tetratricopeptide repeat
      0.019   13.9   7.3      0.031   13.2   0.7    3.3  4  NARP1            NMDA receptor-regulated protein 1
      0.036   13.4   1.1       0.18   11.1   0.3    2.3  2  TPR_MalT         MalT-like TPR region
      0.054   12.5   0.5       0.19   10.7   0.0    2.0  3  ChAPs            ChAPs (Chs5p-Arf1p-binding proteins)
      0.059   13.1  13.1       0.33   10.6   0.1    4.6  5  TPR_21           Tetratricopeptide repeat-like domain
      0.065   13.3   0.4      0.065   13.3   0.4    3.3  3  SRP_TPR_like     Putative TPR-like repeat
       0.12   10.7   0.9       0.43    8.9   0.8    2.0  2  SMG1             Serine/threonine-protein kinase smg-1


Domain annotation for each model (and alignments):
>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.3   4.7e-08   2.8e-05       1      33 [.      70     102 ..      70     103 .. 0.95
   2 !    9.9   0.2    0.0014      0.82       1      33 [.     104     136 ..     104     137 .. 0.83
   3 !   10.1   0.0    0.0012      0.73       2      26 ..     139     163 ..     138     164 .. 0.91
   4 ?    1.5   0.0      0.67     4e+02       3      17 ..     220     234 ..     219     236 .. 0.84
   5 !   24.5   0.0     3e-08   1.8e-05       1      34 []     255     288 ..     255     288 .. 0.96
   6 !   20.4   0.0   6.1e-07   0.00036       7      33 ..     307     333 ..     302     334 .. 0.91
   7 !   25.3   0.3   1.7e-08     1e-05       2      33 ..     340     371 ..     339     372 .. 0.94
   8 ?    7.0   0.0     0.012       7.3      13      34 .]     385     406 ..     384     406 .. 0.93

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 4.7e-08
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPn 33 
                 ae++ + G+ +yk++dy++A+e + kA++  P 
  KHJ33491.1  70 AEIYKCAGNKHYKAKDYKKAIEEYTKAVQRQPS 102
                 79999************************9996 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0014
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPn 33 
                 a +l+n++ ay+ +g+y  Al++  kA  l+P+
  KHJ33491.1 104 ATYLNNRAAAYISNGQYSLALDDSIKACLLEPQ 136
                 5789****************9986666666665 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.0012
       TPR_2   2 ealynlGlayyklgdyeeAleafek 26 
                 ++l +l+++y  lg++++Al+ + +
  KHJ33491.1 139 KILLRLARIYTSLGRPQDALDTYLR 163
                 7899****************99976 PP

  == domain 4  score: 1.5 bits;  conditional E-value: 0.67
       TPR_2   3 alynlGlayyklgdy 17 
                 +  ++G++y+k+g+ 
  KHJ33491.1 220 WQLMRGEVYLKMGNV 234
                 56789********96 PP

  == domain 5  score: 24.5 bits;  conditional E-value: 3e-08
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPnn 34 
                 +eal  +G+++ ++g+ ++A+ +f++Al  dP++
  KHJ33491.1 255 PEALVLRGRVLSAQGENDKAITHFRQALNCDPDY 288
                 699*****************************85 PP

  == domain 6  score: 20.4 bits;  conditional E-value: 6.1e-07
       TPR_2   7 lGlayyklgdyeeAleafekAleldPn 33 
                  G++ yk+g++ eA+e + +Ale+d  
  KHJ33491.1 307 EGNVDYKAGRFSEAIEKYSEALEIDQS 333
                 6999********************976 PP

  == domain 7  score: 25.3 bits;  conditional E-value: 1.7e-08
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPn 33 
                 ++l n++l++++l++y+ A++++e+A+ ldP 
  KHJ33491.1 340 KLLLNRALCHLRLKNYKAAIADCERAIILDPS 371
                 5799***************************7 PP

  == domain 8  score: 7.0 bits;  conditional E-value: 0.012
       TPR_2  13 klgdyeeAleafekAleldPnn 34 
                 ++gd++ A++ +++  eldP +
  KHJ33491.1 385 QSGDWAGAVREWKELQELDPSD 406
                 58******************86 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.7   3.1e-07   0.00019       1      33 [.      70     102 ..      70     103 .. 0.94
   2 !   14.7   0.3   3.4e-05      0.02       3      32 ..     106     135 ..     104     137 .. 0.83
   3 !   12.8   0.0   0.00013      0.08       2      25 ..     139     162 ..     138     164 .. 0.91
   4 ?    1.0   0.1      0.69   4.1e+02       7      16 ..     224     233 ..     221     235 .. 0.89
   5 !   22.0   0.0   1.7e-07    0.0001       1      34 []     255     288 ..     255     288 .. 0.95
   6 !   16.8   0.0   7.5e-06    0.0045      12      34 .]     312     334 ..     306     334 .. 0.92
   7 !   32.8   0.5   6.6e-11   3.9e-08       2      34 .]     340     372 ..     339     372 .. 0.95
   8 ?   -2.0   0.0       6.3   3.7e+03       6      19 ..     471     484 ..     469     484 .. 0.84

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 3.1e-07
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnPn 33 
                 a++++  Gn ++k ++y++A+e y kA++ +P+
  KHJ33491.1  70 AEIYKCAGNKHYKAKDYKKAIEEYTKAVQRQPS 102
                 7889999************************97 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 3.4e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHST CS
       TPR_1   3 alynlGnayfklgkydeAleyyekALelnP 32 
                  l+n+++ay ++g+y  Al++  kA  l+P
  KHJ33491.1 106 YLNNRAAAYISNGQYSLALDDSIKACLLEP 135
                 69******************9666666666 PP

  == domain 3  score: 12.8 bits;  conditional E-value: 0.00013
                 HHHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyye 25 
                 k+l +l+ +y +lg++++Al+ y 
  KHJ33491.1 139 KILLRLARIYTSLGRPQDALDTYL 162
                 7899*****************996 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.69
                 HHHHHHHTT- CS
       TPR_1   7 lGnayfklgk 16 
                 +G +y+k+g+
  KHJ33491.1 224 RGEVYLKMGN 233
                 89*******8 PP

  == domain 5  score: 22.0 bits;  conditional E-value: 1.7e-07
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnPnn 34 
                 ++al  +G ++  +g+ d+A+ ++++AL  +P++
  KHJ33491.1 255 PEALVLRGRVLSAQGENDKAITHFRQALNCDPDY 288
                 589999**************************97 PP

  == domain 6  score: 16.8 bits;  conditional E-value: 7.5e-06
                 HHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  12 fklgkydeAleyyekALelnPnn 34 
                 +k g++ eA+e y++ALe++ +n
  KHJ33491.1 312 YKAGRFSEAIEKYSEALEIDQSN 334
                 799*****************987 PP

  == domain 7  score: 32.8 bits;  conditional E-value: 6.6e-11
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 k l n+++++++l++y+ A++++e+A+ l+P++
  KHJ33491.1 340 KLLLNRALCHLRLKNYKAAIADCERAIILDPSY 372
                 6799***************************97 PP

  == domain 8  score: -2.0 bits;  conditional E-value: 6.3
                 HHHHHHHHTT-HHH CS
       TPR_1   6 nlGnayfklgkyde 19 
                  +G ay  l ++++
  KHJ33491.1 471 DIGEAYETLSDPEK 484
                 5899***9999986 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8   1.8   4.9e-09   2.9e-06       1      42 []      77     118 ..      77     118 .. 0.97
   2 !   13.1   0.1   9.5e-05     0.057       3      42 .]     113     152 ..     112     152 .. 0.94
   3 ?   -1.6   0.0       3.7   2.2e+03      35      42 .]     225     232 ..     224     235 .. 0.65
   4 !   21.8   0.0   1.8e-07   0.00011       1      29 [.     262     290 ..     262     292 .. 0.92
   5 !   27.5   0.1   3.1e-09   1.9e-06       1      31 [.     308     338 ..     308     341 .. 0.90
   6 ?    5.3   0.1     0.027        16       8      27 ..     353     372 ..     350     376 .. 0.87
   7 !    6.8   0.0     0.009       5.4       6      27 ..     385     406 ..     385     409 .. 0.92

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 4.9e-09
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykqG 42 
                 G+  y+  +y++Aie+Y kA++  P++a+ ++n+++ay  +G
  KHJ33491.1  77 GNKHYKAKDYKKAIEEYTKAVQRQPSSATYLNNRAAAYISNG 118
                 999***********************************8877 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 9.5e-05
      TPR_11   3 ayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykqG 42 
                 ay + G+y  A+ +  kA+ l P+++ +++ L+ +y  +G
  KHJ33491.1 113 AYISNGQYSLALDDSIKACLLEPQDPKILLRLARIYTSLG 152
                 799******************************9997776 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 3.7
      TPR_11  35 GlayykqG 42 
                 G++y+k+G
  KHJ33491.1 225 GEVYLKMG 232
                 66666666 PP

  == domain 4  score: 21.8 bits;  conditional E-value: 1.8e-07
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnae 29 
                 G+++ +qG++++Ai+++++Al+ dPd+ +
  KHJ33491.1 262 GRVLSAQGENDKAITHFRQALNCDPDYRD 290
                 788899********************966 PP

  == domain 5  score: 27.5 bits;  conditional E-value: 3.1e-09
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeay 31 
                 G++ y+ G++ eAie+Y++Al++d++n +  
  KHJ33491.1 308 GNVDYKAGRFSEAIEKYSEALEIDQSNKSTN 338
                 9*************************96655 PP

  == domain 6  score: 5.3 bits;  conditional E-value: 0.027
      TPR_11   8 GkyeeAieaYkkAlkldPdn 27 
                  +y++Ai++ ++A+ ldP++
  KHJ33491.1 353 KNYKAAIADCERAIILDPSY 372
                 5899**************98 PP

  == domain 7  score: 6.8 bits;  conditional E-value: 0.009
      TPR_11   6 eqGkyeeAieaYkkAlkldPdn 27 
                 + G++ +A+ ++k+  +ldP++
  KHJ33491.1 385 QSGDWAGAVREWKELQELDPSD 406
                 68******************97 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       7.9   4.7e+03      37      55 ..     174     192 ..     161     194 .. 0.62
   2 !   92.9   3.6   1.6e-29   9.6e-27       1      63 []     427     489 ..     427     489 .. 0.99

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 7.9
                 HHHHHHHHHHHHHHHHHTS CS
        DnaJ  37 peaeekFkeineAyevLsd 55 
                   a+ + + i+ A + L+d
  KHJ33491.1 174 APAKAMLQHIQVAEDALKD 192
                 3566667777777777776 PP

  == domain 2  score: 92.9 bits;  conditional E-value: 1.6e-29
                 HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ   1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63 
                 dyY++Lgv+kda++++IkkaYrk a+ +HPDknp+d++aee+Fk i eAye+LsdpekR++YD
  KHJ33491.1 427 DYYKLLGVEKDADASQIKKAYRKAAIVHHPDKNPDDETAEERFKDIGEAYETLSDPEKRRRYD 489
                 8*************************************************************9 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.2     1e-06   0.00062       4      55 ..      77     126 ..      76     132 .. 0.92
   2 !   11.1   0.0   0.00082      0.49      31      61 ..     135     165 ..     129     172 .. 0.85
   3 !   16.7   0.0   1.4e-05    0.0083      16      66 ..     240     287 ..     222     289 .. 0.82
   4 ?    1.1   0.0       1.1   6.5e+02      12      27 ..     287     302 ..     286     303 .. 0.89
   5 !   27.5   0.0   6.2e-09   3.7e-06       4      66 ..     308     371 ..     306     373 .. 0.89
   6 ?    3.0   0.0      0.27   1.6e+02       5      31 ..     381     407 ..     378     414 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 1e-06
      TPR_16   4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa.a 55 
                 ++ +++a+dy +A++ ++ a+ r+   P  a  l++++ a+  +g + +A+ +
  KHJ33491.1  77 GNKHYKAKDYKKAIEEYTKAVQRQ---PSSATYLNNRAAAYISNGQYSLALdD 126
                 56689*******************...**********************9855 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00082
      TPR_16  31 PdaaeAllllgdaalrqgrlaeAaalyraal 61 
                 P+++  ll l++++  +gr ++A++ y++  
  KHJ33491.1 135 PQDPKILLRLARIYTSLGRPQDALDTYLRID 165
                 99999******************98777754 PP

  == domain 3  score: 16.7 bits;  conditional E-value: 1.4e-05
      TPR_16  16 AaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapd 66 
                 A++ +  +l+ +    +++eAl l+g+++ +qg+ ++A+  +r al ++pd
  KHJ33491.1 240 AQNIAMSLLRTN---NADPEALVLRGRVLSAQGENDKAITHFRQALNCDPD 287
                 555555667777...66888**************************99998 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 1.1
      TPR_16  12 dyddAaaaleaalkrd 27 
                 dy+dA+++l+++ k+ 
  KHJ33491.1 287 DYRDAVKYLRIVQKQE 302
                 8********9999875 PP

  == domain 5  score: 27.5 bits;  conditional E-value: 6.2e-09
      TPR_16   4 araalragdyddAaaaleaalkrdpssPd.aaeAllllgdaalrqgrlaeAaalyraalraapd 66 
                 ++  ++ag++ +A++ + +al+ d s    +   ll++++++lr++++++A+a +++a+  +p+
  KHJ33491.1 308 GNVDYKAGRFSEAIEKYSEALEIDQSNKStNSKLLLNRALCHLRLKNYKAAIADCERAIILDPS 371
                 77889************9999988555558****************************999886 PP

  == domain 6  score: 3.0 bits;  conditional E-value: 0.27
      TPR_16   5 raalragdyddAaaaleaalkrdpssP 31 
                 +a  ++gd++ A++ ++++ ++dps++
  KHJ33491.1 381 TATGQSGDWAGAVREWKELQELDPSDS 407
                 555689*****************8776 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   0.6   0.00016     0.097       3      44 ..      82     123 ..      80     125 .. 0.93
   2 !   17.3   0.1   8.7e-06    0.0052      21      51 ..     134     164 ..     128     180 .. 0.88
   3 ?   -0.5   0.0         3   1.8e+03      37      52 ..     199     214 ..     198     225 .. 0.75
   4 !   18.3   0.2   4.3e-06    0.0026       6      60 ..     236     291 ..     228     297 .. 0.88
   5 !   18.4   0.1   3.8e-06    0.0023       2      46 ..     312     360 ..     311     371 .. 0.84
   6 !   11.9   0.1    0.0004      0.24       5      62 ..     353     410 ..     350     417 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.00016
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAeallalgqldeA 44 
                 +++dy  A++ +++a q  p +a  + + A a++++gq+  A
  KHJ33491.1  82 KAKDYKKAIEEYTKAVQRQPSSATYLNNRAAAYISNGQYSLA 123
                 789********************9999************987 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 8.7e-06
      TPR_19  21 dpknaearllLAeallalgqldeAealLdal 51 
                 +p+++ ++l+LA+++ +lg++++A ++  ++
  KHJ33491.1 134 EPQDPKILLRLARIYTSLGRPQDALDTYLRI 164
                 8***********************9998777 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 3
      TPR_19  37 algqldeAealLdalp 52 
                 al  ld+Ae+lL +  
  KHJ33491.1 199 ALHALDQAEKLLGTGV 214
                 677899****997765 PP

  == domain 4  score: 18.3 bits;  conditional E-value: 4.3e-06
      TPR_19   6 dyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpdd.ar 60 
                  + +A+++  ++l  ++ ++ea+ l  ++l a+g+ d+A+    ++++ dpd   +
  KHJ33491.1 236 SLGDAQNIAMSLLRTNNADPEALVLRGRVLSAQGENDKAITHFRQALNCDPDYrDA 291
                 578999999*******************************************5344 PP

  == domain 5  score: 18.4 bits;  conditional E-value: 3.8e-06
      TPR_19   2 laegdyaeAlalleqalqedpk....naearllLAeallalgqldeAea 46 
                 +++g++ eA++ +++al+ d      n+ ++l+ A ++l l+++++A+a
  KHJ33491.1 312 YKAGRFSEAIEKYSEALEIDQSnkstNSKLLLNRALCHLRLKNYKAAIA 360
                 589**************88554456688888888*************97 PP

  == domain 6  score: 11.9 bits;  conditional E-value: 0.0004
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddarya 62 
                 ++y +A+a  e+a+  dp +  ar   A a  ++g+++ A +  ++l+e dp d+ +a
  KHJ33491.1 353 KNYKAAIADCERAIILDPSYTKARKTKATATGQSGDWAGAVREWKELQELDPSDSSIA 410
                 68***************************************************95544 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0    0.0033         2       3      38 ..      72     107 ..      70     115 .. 0.82
   2 ?    7.4   0.1     0.015       9.1       7      44 .]     110     147 ..     105     147 .. 0.89
   3 !   10.8   0.1    0.0013      0.75       2      27 ..     139     164 ..     138     180 .. 0.88
   4 ?    1.9   0.0      0.91   5.5e+02       4      39 ..     221     259 ..     217     261 .. 0.84
   5 !   22.1   0.0   2.9e-07   0.00017       1      41 [.     255     295 ..     255     296 .. 0.94
   6 ?    4.5   0.0      0.13        77      11      31 ..     311     331 ..     308     338 .. 0.84
   7 !    8.6   0.1    0.0064       3.8       3      39 ..     341     377 ..     339     383 .. 0.87
   8 ?    3.6   0.0      0.25   1.5e+02      13      39 ..     385     411 ..     382     414 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0033
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeaw 38 
                  +++++  ++ + d+++Ai+ + +a++++P++a+++
  KHJ33491.1  72 IYKCAGNKHYKAKDYKKAIEEYTKAVQRQPSSATYL 107
                 5666777788999******************99876 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.015
      TPR_14   7 laeallalGdpdeAiallrralalaPddaeawlllaql 44 
                 +a+a+  +G++  A++   +a+ l P+d+ ++l+la++
  KHJ33491.1 110 RAAAYISNGQYSLALDDSIKACLLEPQDPKILLRLARI 147
                 6999********9999777777889***********96 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 0.0013
      TPR_14   2 eallalaeallalGdpdeAiallrra 27 
                 + ll+la+++  lG+p++A++ + r+
  KHJ33491.1 139 KILLRLARIYTSLGRPQDALDTYLRI 164
                 6799****************998876 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.91
      TPR_14   4 llalaeallalGd...pdeAiallrralalaPddaeawl 39 
                 +l+++e++l  G+   + +A +++  +l+++ +d+ea+ 
  KHJ33491.1 221 QLMRGEVYLKMGNvnsLGDAQNIAMSLLRTNNADPEALV 259
                 5899*******9977788899999999999999998875 PP

  == domain 5  score: 22.1 bits;  conditional E-value: 2.9e-07
      TPR_14   1 peallalaeallalGdpdeAiallrralalaPddaeawlll 41 
                 peal +++++l a+G+ d+Ai+++r+al  +Pd ++a  +l
  KHJ33491.1 255 PEALVLRGRVLSAQGENDKAITHFRQALNCDPDYRDAVKYL 295
                 799******************************99987765 PP

  == domain 6  score: 4.5 bits;  conditional E-value: 0.13
      TPR_14  11 llalGdpdeAiallrralala 31 
                  + +G++ eAi+ + +al+ +
  KHJ33491.1 311 DYKAGRFSEAIEKYSEALEID 331
                 5679**************976 PP

  == domain 7  score: 8.6 bits;  conditional E-value: 0.0064
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawl 39 
                 +ll +a  +l+l ++++Aia ++ra+ l+P+   a+ 
  KHJ33491.1 341 LLLNRALCHLRLKNYKAAIADCERAIILDPSYTKARK 377
                 567788899*********************9988886 PP

  == domain 8  score: 3.6 bits;  conditional E-value: 0.25
      TPR_14  13 alGdpdeAiallrralalaPddaeawl 39 
                 ++Gd+++A++  +++ +l+P+d  +  
  KHJ33491.1 385 QSGDWAGAVREWKELQELDPSDSSIAK 411
                 58******************9987665 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.2   0.00079      0.47      13      33 ..      82     102 ..      77     103 .. 0.89
   2 ?    7.0   0.3     0.013       7.7       2      34 .]     105     137 ..     104     137 .. 0.92
   3 !    8.0   0.0     0.006       3.6       2      25 ..     139     162 ..     138     164 .. 0.89
   4 ?    0.1   0.0       2.1   1.3e+03       6      17 ..     223     234 ..     221     236 .. 0.84
   5 !   15.2   0.0   3.1e-05     0.019       2      33 ..     256     287 ..     255     288 .. 0.94
   6 ?    5.6   0.1     0.035        21      13      33 ..     313     333 ..     308     334 .. 0.89
   7 !   17.3   0.2   6.5e-06    0.0039       2      33 ..     340     371 ..     339     372 .. 0.93
   8 ?   -1.4   0.0       6.4   3.8e+03       7      20 ..     472     485 ..     471     488 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00079
                 HTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  13 klgdyeeAkeyyekaleldpd 33 
                 k +dy++A+e y ka++ +p+
  KHJ33491.1  82 KAKDYKKAIEEYTKAVQRQPS 102
                 679**************9996 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.013
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                  +++n + +y++ g+y  A     ka+ l+p++
  KHJ33491.1 105 TYLNNRAAAYISNGQYSLALDDSIKACLLEPQD 137
                 6899**********************9999985 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.006
                 CHHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyye 25 
                 +++++l++iy +lg+ + A  +y 
  KHJ33491.1 139 KILLRLARIYTSLGRPQDALDTYL 162
                 6899*************9999886 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 2.1
                 HHHHHHHHTT-H CS
       TPR_8   6 nlgsiylklgdy 17 
                 + g +ylk+g+ 
  KHJ33491.1 223 MRGEVYLKMGNV 234
                 7899******95 PP

  == domain 5  score: 15.2 bits;  conditional E-value: 3.1e-05
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ea+++ g++++ +g+ ++A+  +++al  dpd
  KHJ33491.1 256 EALVLRGRVLSAQGENDKAITHFRQALNCDPD 287
                 7999***********************99998 PP

  == domain 6  score: 5.6 bits;  conditional E-value: 0.035
                 HTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  13 klgdyeeAkeyyekaleldpd 33 
                 k g++ eA+e y +ale+d++
  KHJ33491.1 313 KAGRFSEAIEKYSEALEIDQS 333
                 569****************87 PP

  == domain 7  score: 17.3 bits;  conditional E-value: 6.5e-06
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 ++++n ++++l l++y++A++ +e+a+ ldp+
  KHJ33491.1 340 KLLLNRALCHLRLKNYKAAIADCERAIILDPS 371
                 6789***********************99996 PP

  == domain 8  score: -1.4 bits;  conditional E-value: 6.4
                 HHHHHHHTT-HHHH CS
       TPR_8   7 lgsiylklgdyeeA 20 
                 +g +y++l d e+ 
  KHJ33491.1 472 IGEAYETLSDPEKR 485
                 899*****999985 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   1.1   4.6e-05     0.027       3      66 ..      70     125 ..      68     131 .. 0.87
   2 !   15.8   0.5   2.1e-05     0.013       3      69 ..     104     162 ..     102     164 .. 0.91
   3 ?    0.3   0.0       1.5   8.8e+02      27      60 ..     200     233 ..     196     236 .. 0.78
   4 !   16.1   0.0   1.8e-05     0.011      10      74 ..     225     284 ..     218     287 .. 0.69
   5 !   23.3   1.1   9.4e-08   5.6e-05      10      71 ..     308     365 ..     303     366 .. 0.88
   6 !   11.7   0.3   0.00041      0.24       5      30 ..     341     366 ..     336     382 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 4.6e-05
      TPR_12   3 atalnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAle 66 
                 a ++   ++ ++++++y +A+e + ka++++     p     at+l+n + +y   g+y  Al+
  KHJ33491.1  70 AEIYKCAGNKHYKAKDYKKAIEEYTKAVQRQ-----PS---SATYLNNRAAAYISNGQYSLALD 125
                 5666667777899**************8888.....75...6********************97 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 2.1e-05
      TPR_12   3 atalnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelle 69 
                 at lnn+aa++   g+y  Al+   ka   +  ll+p+ p    +l  L+r+y  lgr+++Al+ + 
  KHJ33491.1 104 ATYLNNRAAAYISNGQYSLALDDSIKA---C--LLEPQDPK---ILLRLARIYTSLGRPQDALDTYL 162
                 677889*********************...8..77799988...7*******************996 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 1.5
      TPR_12  27 ekaleiarrllGpdhpltattlrnLgrlyralgr 60 
                  +al++a++llG+        +   g++y+++g+
  KHJ33491.1 200 LHALDQAEKLLGTGVQRPRKWQLMRGEVYLKMGN 233
                 6899999999998887777788888888887776 PP

  == domain 4  score: 16.1 bits;  conditional E-value: 1.8e-05
      TPR_12  10 aavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealai 74 
                 ++v++++g+       l  a +ia +ll +++ +  ++l   gr+++a+g+ ++A+ ++++al+ 
  KHJ33491.1 225 GEVYLKMGN----VNSLGDAQNIAMSLLRTNN-ADPEALVLRGRVLSAQGENDKAITHFRQALNC 284
                 566666666....3344444445544444444.56788999999999999999999999999986 PP

  == domain 5  score: 23.3 bits;  conditional E-value: 9.4e-08
      TPR_12  10 aavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleea 71 
                 ++v +++gr+ eA+e + +alei ++   +     +  l n + ++++l++y++A++  e+a
  KHJ33491.1 308 GNVDYKAGRFSEAIEKYSEALEIDQSNKST----NSKLLLNRALCHLRLKNYKAAIADCERA 365
                 8999********************988444....5689*****************9876666 PP

  == domain 6  score: 11.7 bits;  conditional E-value: 0.00041
      TPR_12   5 alnnlaavlrrlgrydeAlellekal 30 
                 +l n+a++++rl++y  A++ +e+a+
  KHJ33491.1 341 LLLNRALCHLRLKNYKAAIADCERAI 366
                 6779********************96 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       7.7   4.6e+03      23      34 .]      80      91 ..      70      91 .. 0.57
   2 !   19.3   0.4   1.7e-06     0.001       2      32 ..      93     123 ..      92     125 .. 0.94
   3 !   11.3   0.0   0.00062      0.37       4      33 ..     129     158 ..     128     159 .. 0.92
   4 ?    6.3   0.0     0.024        14       9      33 ..     251     275 ..     245     276 .. 0.86
   5 ?    0.9   0.0       1.3   7.7e+02       2      12 ..     278     288 ..     277     292 .. 0.88
   6 !   10.5   0.5    0.0011      0.64       2      33 ..     324     359 ..     323     360 .. 0.83
   7 ?    3.2   0.0      0.23   1.4e+02       2      32 ..     362     392 ..     361     394 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 7.7
      TPR_17 23 llknGdlmtArq 34
                ++k++d+++A++
  KHJ33491.1 80 HYKAKDYKKAIE 91
                347777777764 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 1.7e-06
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                 y+ka+++ P++a  +nn+A ++ +nG++  A
  KHJ33491.1  93 YTKAVQRQPSSATYLNNRAAAYISNGQYSLA 123
                 9**************************9877 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 0.00062
      TPR_17   4 kaleldPnnadaynnLAelllknGdlmtAr 33 
                 ka  l+P +++ +  LA+++ ++G++++A+
  KHJ33491.1 129 KACLLEPQDPKILLRLARIYTSLGRPQDAL 158
                 677789**********************96 PP

  == domain 4  score: 6.3 bits;  conditional E-value: 0.024
      TPR_17   9 dPnnadaynnLAelllknGdlmtAr 33 
                 +  +++a+ +++++l+ +G+ ++A+
  KHJ33491.1 251 NNADPEALVLRGRVLSAQGENDKAI 275
                 55689*****************997 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 1.3
      TPR_17   2 ylkaleldPnn 12 
                 +++al +dP++
  KHJ33491.1 278 FRQALNCDPDY 288
                 889******96 PP

  == domain 6  score: 10.5 bits;  conditional E-value: 0.0011
      TPR_17   2 ylkaleld....PnnadaynnLAelllknGdlmtAr 33 
                 y +ale+d     +n++++ n+A ++l++++++ A+
  KHJ33491.1 324 YSEALEIDqsnkSTNSKLLLNRALCHLRLKNYKAAI 359
                 778899984444666******************997 PP

  == domain 7  score: 3.2 bits;  conditional E-value: 0.23
      TPR_17   2 ylkaleldPnnadaynnLAelllknGdlmtA 32 
                 +++a+ ldP++ +a   +A++  + Gd++ A
  KHJ33491.1 362 CERAIILDPSYTKARKTKATATGQSGDWAGA 392
                 79************99999998888887776 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.2     0.024        14      30      55 ..      77     103 ..      62     107 .. 0.74
   2 !   24.4   0.4   4.4e-08   2.6e-05       3      80 ..      84     162 ..      82     164 .. 0.87
   3 !    8.8   0.0    0.0031       1.9      12      80 ..     206     279 ..     200     281 .. 0.83
   4 ?    2.2   0.1      0.36   2.2e+02      38      77 ..     287     329 ..     280     330 .. 0.76
   5 !   15.4   1.4   2.7e-05     0.016       5      64 ..     317     381 ..     313     394 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.024
                 HHHHHHTT-HHHHHHHHHCT.SHHHC- CS
      ANAPC3  30 AlclylngqykrAyellrka.klnsks 55 
                 +  +y++++yk+A+e + ka + +++s
  KHJ33491.1  77 GNKHYKAKDYKKAIEEYTKAvQRQPSS 103
                 6679***********999996665555 PP

  == domain 2  score: 24.4 bits;  conditional E-value: 4.4e-08
                 T-HHHHHHHHHHHH.HHH--HHHHHHH..HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3   3 nnyknAiflaerllaaetespedayll..AlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                 ++yk+Ai  + +++  +++ ++++yl   A ++ +ngqy  A++   ka  l+++++++++ +A+ +  L++ ++A++++ 
  KHJ33491.1  84 KDYKKAIEEYTKAV--QRQPSSATYLNnrAAAYISNGQYSLALDDSIKAcLLEPQDPKILLRLARIYTSLGRPQDALDTYL 162
                 68999999999999..4444444555367************************************************9976 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0031
                 HHHHH.HHH--HHHHHHH.HHHHHHTT-HHH...HHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3  12 aerllaaetespedayll.Alclylngqykr...Ayellrka.klnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                 ae+ll +  ++p    l  +++++++g+ ++   A++++ ++ ++n+ ++++++l +++l ++++ ++Ai+++ 
  KHJ33491.1 206 AEKLLGTGVQRPRKWQLMrGEVYLKMGNVNSlgdAQNIAMSLlRTNNADPEALVLRGRVLSAQGENDKAITHFR 279
                 7888887778888866655999999999554444999999999999*************************997 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.36
                 -HHHHHHHHHCTSHHHC-H...HHHHHHHHHHHHTT-HHHHHH CS
      ANAPC3  38 qykrAyellrkaklnsksl...gcrylfAqcllkLkkyeeAia 77 
                 +y  A ++lr  ++++k +   ++ y +++ + +++ky eA+ 
  KHJ33491.1 287 DYRDAVKYLRIVQKQEKMKgegNVDYKAGRFSEAIEKYSEALE 329
                 6777777777775555555667899999999999999999986 PP

  == domain 5  score: 15.4 bits;  conditional E-value: 2.7e-05
                 HHHHHHHHHHHH...HHH--HHHHHHH..HHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHH CS
      ANAPC3   5 yknAiflaerlla..aetespedayll..AlclylngqykrAyellrka.klnskslgcrylfAq 64 
                 + +Ai  ++ +l+  ++++s ++ +ll  Alc++++++yk A+  +++a  l+++  ++r ++A 
  KHJ33491.1 317 FSEAIEKYSEALEidQSNKSTNSKLLLnrALCHLRLKNYKAAIADCERAiILDPSYTKARKTKAT 381
                 56666666667756577888888888899*******************98888888888888876 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0086       5.2       7      51 ..      82     126 ..      78     128 .. 0.93
   2 !   17.2   1.6   7.3e-06    0.0044       3      73 .]     112     181 ..     111     181 .. 0.92
   3 ?   -2.3   0.0       8.8   5.2e+03      34      45 ..     223     234 ..     202     236 .. 0.75
   4 !    9.4   0.1     0.002       1.2      14      65 ..     240     291 ..     233     296 .. 0.91
   5 ?   -0.1   0.0       1.8   1.1e+03      38      60 ..     310     332 ..     307     346 .. 0.83
   6 !   21.0   0.0   4.6e-07   0.00028       4      64 ..     348     409 ..     346     416 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0086
       TPR_9   7 reedweralavverllllaPddpeerrdRGlllaqlGclsaAlad 51 
                  ++d+ +a++ +   ++ +P ++  +  R+ ++   G++s Al+d
  KHJ33491.1  82 KAKDYKKAIEEYTKAVQRQPSSATYLNNRAAAYISNGQYSLALDD 126
                 68999999999999*****************************98 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 7.3e-06
       TPR_9   3 aiaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalap..dapdaeairaqLn 73 
                 a++i++ +++ al  +    ll P+dp  ++  ++++  lG+++ A   L++yl+++p  +a d++ ++a+L+
  KHJ33491.1 112 AAYISNGQYSLALDDSIKACLLEPQDPKILLRLARIYTSLGRPQDA---LDTYLRIDPpaSAKDIAPAKAMLQ 181
                 689*****************************************77...789******998888888888885 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 8.8
       TPR_9  34 dRGlllaqlGcl 45 
                  RG ++ ++G++
  KHJ33491.1 223 MRGEVYLKMGNV 234
                 499999999986 PP

  == domain 4  score: 9.4 bits;  conditional E-value: 0.002
       TPR_9  14 alavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapda 65 
                 a  ++ +ll  +  dpe +  RG++l  +G   +A+  + ++l  +pd +da
  KHJ33491.1 240 AQNIAMSLLRTNNADPEALVLRGRVLSAQGENDKAITHFRQALNCDPDYRDA 291
                 55688999***************************************98887 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 1.8
       TPR_9  38 llaqlGclsaAladLeaylalap 60 
                 + ++ G++s+A++    +l+++ 
  KHJ33491.1 310 VDYKAGRFSEAIEKYSEALEIDQ 332
                 67899********9999998765 PP

  == domain 6  score: 21.0 bits;  conditional E-value: 4.6e-07
       TPR_9   4 iaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalap.dapd 64 
                 +++r +++ +a+a +er ++l+P     r   + +  q+G++++A+++     +l+p d   
  KHJ33491.1 348 CHLRLKNYKAAIADCERAIILDPSYTKARKTKATATGQSGDWAGAVREWKELQELDPsDSSI 409
                 69999*******************************************99999999944444 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.1     0.026        16      14      35 ..      85     104 ..      80     105 .. 0.85
   2 ?   -0.0   0.4         2   1.2e+03       2      19 ..     107     124 ..     106     125 .. 0.90
   3 !   14.5   0.0   4.4e-05     0.026       2      24 ..     141     163 ..     140     178 .. 0.94
   4 !   14.5   0.0   4.6e-05     0.028       1      26 [.     257     282 ..     257     290 .. 0.89
   5 ?   -1.4   0.0       5.3   3.2e+03      14      23 ..     287     296 ..     287     297 .. 0.89
   6 ?    6.5   0.0     0.016       9.5      12      31 ..     314     333 ..     312     336 .. 0.80
   7 !    9.3   0.1     0.002       1.2       2      32 ..     342     370 ..     341     374 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.026
       TPR_7  14 dyeeAielyeqsLaltkdpeda 35 
                 dy++Aie y++  a+ ++p+ a
  KHJ33491.1  85 DYKKAIEEYTK--AVQRQPSSA 104
                 9**********..998888765 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 2
       TPR_7   2 LlnLarlysrlGdyeeAi 19 
                 L+n a +y + G+y+ A+
  KHJ33491.1 107 LNNRAAAYISNGQYSLAL 124
                 7999**********9886 PP

  == domain 3  score: 14.5 bits;  conditional E-value: 4.4e-05
       TPR_7   2 LlnLarlysrlGdyeeAielyeq 24 
                 Ll+Lar+y +lG+ ++A++ y +
  KHJ33491.1 141 LLRLARIYTSLGRPQDALDTYLR 163
                 899*****************987 PP

  == domain 4  score: 14.5 bits;  conditional E-value: 4.6e-05
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsL 26 
                 aL+  +r+ s++G+ ++Ai++++q+L
  KHJ33491.1 257 ALVLRGRVLSAQGENDKAITHFRQAL 282
                 68888*******************55 PP

  == domain 5  score: -1.4 bits;  conditional E-value: 5.3
       TPR_7  14 dyeeAielye 23 
                 dy++A+++++
  KHJ33491.1 287 DYRDAVKYLR 296
                 8******985 PP

  == domain 6  score: 6.5 bits;  conditional E-value: 0.016
       TPR_7  12 lGdyeeAielyeqsLaltkd 31 
                  G+++eAie y ++L+++ +
  KHJ33491.1 314 AGRFSEAIEKYSEALEIDQS 333
                 69***********7776654 PP

  == domain 7  score: 9.3 bits;  conditional E-value: 0.002
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkdp 32 
                 Lln a ++ rl +y+ Ai  +e+  a+  dp
  KHJ33491.1 342 LLNRALCHLRLKNYKAAIADCER--AIILDP 370
                 89*********************..776665 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.3   0.00027      0.16     156     239 ..      80     163 ..      66     178 .. 0.79
   2 !   14.9   0.0   1.9e-05     0.011     140     181 ..     249     290 ..     215     296 .. 0.78
   3 ?    5.9   0.2     0.011       6.4     140     185 ..     333     378 ..     311     419 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00027
      TPR_15 156 yrqegqtdaAlrdyreAlalapdsselraallWlliDlgrrae.LrellkawkaraesdasLwgplaaAlllLgrpkkALeylrk 239
                 + ++ + ++A++ y +A++++p s++  ++   ++i  g++   L   +ka   +  +d+++ + la  +  Lgrp+ AL+ + +
  KHJ33491.1  80 HYKAKDYKKAIEEYTKAVQRQPSSATYLNNRAAAYISNGQYSLaLDDSIKACLLE-PQDPKILLRLARIYTSLGRPQDALDTYLR 163
                 5567778899999999999999999999999999999999988778888887754.89999999999999999999999986544 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1.9e-05
      TPR_15 140 eaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdsse 181
                  + + ++  l++r+++ +++g++d+A++ +r+Al+ +pd  +
  KHJ33491.1 249 RTNNADPEALVLRGRVLSAQGENDKAITHFRQALNCDPDYRD 290
                 345689999*****************************9766 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.011
      TPR_15 140 eaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdsselraa 185
                 ++ + ++  ll ra  +++  + +aA+ d ++A+ l+p  +++r++
  KHJ33491.1 333 SNKSTNSKLLLNRALCHLRLKNYKAAIADCERAIILDPSYTKARKT 378
                 33457788999****************************9999986 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.2    0.0024       1.4      10      33 .]      80     103 ..      80     103 .. 0.93
   2 !    7.9   0.0    0.0087       5.2       3      24 ..     141     162 ..     140     164 .. 0.92
   3 ?    0.2   0.0       2.6   1.5e+03       4      16 ..     222     234 ..     220     254 .. 0.68
   4 !   10.1   0.0    0.0018       1.1       1      28 [.     256     283 ..     256     288 .. 0.92
   5 ?   -0.9   0.0       5.7   3.4e+03      15      28 ..     287     300 ..     285     301 .. 0.84
   6 ?    0.6   0.0       1.9   1.1e+03      11      27 ..     312     328 ..     308     330 .. 0.78
   7 ?    7.6   0.0     0.011       6.5       3      27 ..     342     366 ..     340     372 .. 0.88
   8 ?   -0.8   0.0       5.2   3.1e+03      14      31 ..     387     404 ..     373     406 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0024
                 HHHHHHHHHHHHHHHHHHHH-TT- CS
       TPR_6  10 yrklgdtdkAlealerlikeYPdS 33 
                 ++k++d+ kA+e + + +++ P S
  KHJ33491.1  80 HYKAKDYKKAIEEYTKAVQRQPSS 103
                 58889*****************98 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0087
                 HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAleale 24 
                 l++la+ y +lg++++Al+++ 
  KHJ33491.1 141 LLRLARIYTSLGRPQDALDTYL 162
                 89********99*******995 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 2.6
                 HHHHHHHHHHHHH CS
       TPR_6   4 yklalsyrklgdt 16 
                 +++++ y+k+g+ 
  KHJ33491.1 222 LMRGEVYLKMGNV 234
                 7888888887553 PP

  == domain 4  score: 10.1 bits;  conditional E-value: 0.0018
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   1 dAlyklalsyrklgdtdkAlealerlik 28 
                 +Al ++++ + ++g+ dkA++ +++ ++
  KHJ33491.1 256 EALVLRGRVLSAQGENDKAITHFRQALN 283
                 79**********************9986 PP

  == domain 5  score: -0.9 bits;  conditional E-value: 5.7
                 HHHHHHHHHHHHHH CS
       TPR_6  15 dtdkAlealerlik 28 
                 d+++A+++l+ + k
  KHJ33491.1 287 DYRDAVKYLRIVQK 300
                 899******98765 PP

  == domain 6  score: 0.6 bits;  conditional E-value: 1.9
                 HHHHHHHHHHHHHHHHH CS
       TPR_6  11 rklgdtdkAlealerli 27 
                 +k+g+ ++A+e + + +
  KHJ33491.1 312 YKAGRFSEAIEKYSEAL 328
                 67779999999998766 PP

  == domain 7  score: 7.6 bits;  conditional E-value: 0.011
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAlealerli 27 
                 l+++al++++l+++ +A++  er i
  KHJ33491.1 342 LLNRALCHLRLKNYKAAIADCERAI 366
                 89****************9888876 PP

  == domain 8  score: -0.8 bits;  conditional E-value: 5.2
                 HHHHHHHHHHHHHHHH-T CS
       TPR_6  14 gdtdkAlealerlikeYP 31 
                 gd++ A++ +++l +  P
  KHJ33491.1 387 GDWAGAVREWKELQELDP 404
                 79*****99999988777 PP

>> BTAD  Bacterial transcriptional activator domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.1    0.0032       1.9      63     121 ..     105     163 ..      72     184 .. 0.90
   2 ?    4.3   0.0     0.085        51       7      34 ..     256     283 ..     252     289 .. 0.93
   3 ?    0.8   0.0      0.98   5.9e+02      12      34 ..     307     329 ..     298     333 .. 0.67
   4 ?    5.2   0.1     0.043        26      66     125 ..     345     402 ..     331     421 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0032
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHH CS
        BTAD  63 ealealaeaelrlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYer 121
                 + l  +a+a ++ G+++ al++  +++ ++P + +    l r +  +Gr ++AL +Y r
  KHJ33491.1 105 TYLNNRAAAYISNGQYSLALDDSIKACLLEPQDPKILLRLARIYTSLGRPQDALDTYLR 163
                 56788999999**********************************************76 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.085
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHT CS
        BTAD   7 ealvaagraalaagdpeeaaelleaAla 34 
                 ealv +gr ++a+g+ ++a+ ++++Al+
  KHJ33491.1 256 EALVLRGRVLSAQGENDKAITHFRQALN 283
                 68899*********************96 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.98
                 HHHHHHHTT-HHHHHHHHHHHHT CS
        BTAD  12 agraalaagdpeeaaelleaAla 34 
                 +g+   +ag++ ea+e++++Al+
  KHJ33491.1 307 EGNVDYKAGRFSEAIEKYSEALE 329
                 56666667777777777777765 PP

  == domain 4  score: 5.2 bits;  conditional E-value: 0.043
                 HHHHHHHHHTT-HHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
        BTAD  66 ealaeaelrlGraeealaelealvaehPlrErlhrqlmrAlarsGrqaeALevYerlrrl 125
                 +al   +lrl  +++a+a+ e+++ ++P   ++++   +A  +sG+ a A + +++l++l
  KHJ33491.1 345 RAL--CHLRLKNYKAAIADCERAIILDPSYTKARKTKATATGQSGDWAGAVREWKELQEL 402
                 334..4589999999999999999999999999999999999999999999999888654 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1       1.2   7.1e+02      13      37 ..      81      98 ..      70     101 .. 0.54
   2 ?    6.6   0.4     0.012       7.2       2      28 ..     104     130 ..     103     132 .. 0.88
   3 !    6.9   0.0    0.0095       5.7       6      22 ..     142     158 ..     140     162 .. 0.89
   4 !   10.1   0.0     0.001       0.6       9      31 ..     262     284 ..     257     284 .. 0.95
   5 ?   -0.2   0.0       1.7     1e+03      11      31 ..     310     330 ..     308     333 .. 0.66
   6 ?    2.7   0.1      0.21   1.3e+02      12      29 ..     349     366 ..     342     368 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 1.2
      TPR_10 13 rqrgrydeAealleealairrrllG 37
                ++        +++++a++ + +++ 
  KHJ33491.1 81 YKA-------KDYKKAIEEYTKAVQ 98
                344.......445555555555543 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.012
      TPR_10   2 AsslnNLanalrqrgrydeAealleea 28 
                 A+ lnN a+a+ + g+y  A+++ ++a
  KHJ33491.1 104 ATYLNNRAAAYISNGQYSLALDDSIKA 130
                 899**************9999876655 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0095
      TPR_10   6 nNLanalrqrgrydeAe 22 
                   La++++++gr ++A+
  KHJ33491.1 142 LRLARIYTSLGRPQDAL 158
                 569*************8 PP

  == domain 4  score: 10.1 bits;  conditional E-value: 0.001
      TPR_10   9 analrqrgrydeAealleealai 31 
                 +++l+++g+ d+A  ++++al++
  KHJ33491.1 262 GRVLSAQGENDKAITHFRQALNC 284
                 89*******************86 PP

  == domain 5  score: -0.2 bits;  conditional E-value: 1.7
      TPR_10  11 alrqrgrydeAealleealai 31 
                 + ++ gr+ eA + + eal+i
  KHJ33491.1 310 VDYKAGRFSEAIEKYSEALEI 330
                 556778888887766666665 PP

  == domain 6  score: 2.7 bits;  conditional E-value: 0.21
      TPR_10  12 lrqrgrydeAealleeal 29 
                 + ++++y++A a++e+a+
  KHJ33491.1 349 HLRLKNYKAAIADCERAI 366
                 66899************8 PP

>> SNAP  Soluble NSF attachment protein, SNAP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.8   0.3    0.0016      0.95      60     113 ..      68     123 ..      63     181 .. 0.73
   2 !   14.5   1.6   2.9e-05     0.017     129     267 ..     269     403 ..     233     416 .. 0.72
   3 ?   -0.2   0.1      0.91   5.4e+02     146     184 ..     435     475 ..     407     479 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0016
                 HHHHHHHHTT-HHHHHHHHHHHHHHHHHT...-HHHHHHHHHHHHHHHHHTT-HHHH CS
        SNAP  60 kaAecqeklkekdeaanayveAakcykkv...speeAvealekAieiytekgrfrra 113
                 + Ae+++ +++k+  a+ y +A + y k    +p ++++ l++ ++ y+++g+ + a
  KHJ33491.1  68 EEAEIYKCAGNKHYKAKDYKKAIEEYTKAvqrQP-SSATYLNNRAAAYISNGQYSLA 123
                 4567777777777777777777777766654222.4445555555667777776655 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 2.9e-05
                 --HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHH......HHHHHTT-HHHHHHHHHHHHHTTSS-TTTGGGHHHHHHHHHHHHHHTT-HHHHHHHHHG CS
        SNAP 129 gdlekAieaYekAaelyeqeeakalankcllkvA......elsaelekyekAieiyekvakkslennllkysvkeyflkaglcrLaagDvvaakralek 221
                 g+ +kAi ++++A +   + +   +   + +k        ++  + +++++Aie y++  +   +n+ +     + +l+ +lc+L  +++ aa   +e+
  KHJ33491.1 269 GENDKAITHFRQALNCDPDYRDAVKYLRIVQKQEkmkgegNVDYKAGRFSEAIEKYSEALEIDQSNKSTN---SKLLLNRALCHLRLKNYKAAIADCER 364
                 66667777777776653333333333333333330001114455667999******99988887777665...4679********************** PP

                 GG-----------HHHHHHHHHHHHTT-TTTHHHHHHHHTTSS--- CS
        SNAP 222 yeeldpsFassrEakllkdlleaveegdvekfteavkefDkiskld 267
                    ldps+++ r  k       a  +g++   + av+e++++++ld
  KHJ33491.1 365 AIILDPSYTKARKTK-------ATATGQSGDWAGAVREWKELQELD 403
                 ***********9875.......555555556666666666666666 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.91
                 HHTT-HHHHHHHHHHHHHHHHHTT..-HHHHHHHHHHHHHT CS
        SNAP 146 eqeeakalankcllkvAelsaele..kyekAieiyekvakk 184
                 e++   ++ +k++ k+A ++  ++  + e A e +++++++
  KHJ33491.1 435 EKDADASQIKKAYRKAAIVHHPDKnpDDETAEERFKDIGEA 475
                 45566677788888888776554445788888888888765 PP

>> TPR_4  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0      0.12        73       5      23 ..     142     160 ..     139     163 .. 0.88
   2 !   10.3   0.0    0.0015      0.92       1      26 []     255     280 ..     255     280 .. 0.94
   3 ?   -0.5   0.1       4.6   2.8e+03      13      24 ..     385     396 ..     380     398 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.12
       TPR_4   5 laLArallalGdldeAral 23 
                 l LAr +  lG++ +A+++
  KHJ33491.1 142 LRLARIYTSLGRPQDALDT 160
                 679*************987 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0015
       TPR_4   1 arallaLArallalGdldeAraller 26 
                 + al++++r+l a+G+ d A +++++
  KHJ33491.1 255 PEALVLRGRVLSAQGENDKAITHFRQ 280
                 6799****************999997 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 4.6
       TPR_4  13 alGdldeArall 24 
                 + Gd++ A + +
  KHJ33491.1 385 QSGDWAGAVREW 396
                 57******9976 PP

>> SHNi-TPR  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.16        98      17      29 ..      86      98 ..      84     100 .. 0.88
   2 !    9.5   0.0    0.0011      0.64       8      32 ..     308     332 ..     308     337 .. 0.85
   3 ?    0.1   0.0      0.93   5.6e+02      16      28 ..     354     366 ..     353     368 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.16
    SHNi-TPR 17 FpqAveDlrkaLe 29
                ++ A+e+++ka++
  KHJ33491.1 86 YKKAIEEYTKAVQ 98
                7889******997 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0011
    SHNi-TPR   8 GEislEnenFpqAveDlrkaLeLre 32 
                 G+++  +++F++A+e + +aLe+ +
  KHJ33491.1 308 GNVDYKAGRFSEAIEKYSEALEIDQ 332
                 67788899**************965 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.93
    SHNi-TPR  16 nFpqAveDlrkaL 28 
                 n++ A+ D ++a+
  KHJ33491.1 354 NYKAAIADCERAI 366
                 9*******99986 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.8     0.015       9.2      16      32 ..      82      98 ..      78      99 .. 0.92
   2 ?    1.2   0.0      0.65   3.9e+02      30      49 ..     274     292 ..     272     307 .. 0.50
   3 !    8.0   0.1     0.005         3      16      32 ..     313     329 ..     312     333 .. 0.92
   4 ?   -1.7   0.0       5.2   3.1e+03      17      33 ..     352     361 ..     339     381 .. 0.63

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.015
         MIT 16 nagnyeeAlelYkeale 32
                +a++y++A+e Y++a++
  KHJ33491.1 82 KAKDYKKAIEEYTKAVQ 98
                689************97 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.65
         MIT  30 alelLlqalkekneerrell 49 
                 a+ ++ qal++ ++  r+++
  KHJ33491.1 274 AITHFRQALNC-DPDYRDAV 292
                 44444444442.22333333 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.005
         MIT  16 nagnyeeAlelYkeale 32 
                 +ag ++eA+e+Y+eale
  KHJ33491.1 313 KAGRFSEAIEKYSEALE 329
                 5899***********98 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 5.2
         MIT  17 agnyeeAlelYkealel 33 
                  +       +Yk a+  
  KHJ33491.1 352 LK-------NYKAAIAD 361
                 44.......45555554 PP

>> Coatomer_E  Coatomer epsilon subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.033        20     190     259 ..      93     162 ..      82     190 .. 0.82
   2 ?   -0.9   0.0       1.4   8.5e+02     212     241 ..     266     295 ..     220     309 .. 0.70
   3 ?    7.1   0.0    0.0052       3.1     180     232 ..     321     370 ..     315     417 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.033
                 HHHHHHHS---HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT--HHHHHHHH CS
  Coatomer_E 190 fqelsekykstplllngkAvvslllgryeeAeslLkeaLdkdakdeetLiNlvvaaqhlgkdaevsernl 259
                 +    ++ +s    ln +A++ +  g+y  A     +a   +++d+  L  l    + lg+++++ + +l
  KHJ33491.1  93 YTKAVQRQPSSATYLNNRAAAYISNGQYSLALDDSIKACLLEPQDPKILLRLARIYTSLGRPQDALDTYL 162
                 55555667788899***************99887777777899*********************998887 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.4
                 HHTT-HHHHHHHHHHHHHH-TT-HHHHHHH CS
  Coatomer_E 212 lllgryeeAeslLkeaLdkdakdeetLiNl 241
                  ++g+ ++A +  ++aL+ d+ + ++   l
  KHJ33491.1 266 SAQGENDKAITHFRQALNCDPDYRDAVKYL 295
                 456778888899999999999998887655 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0052
                 TTHHHHHHHHHHHHHHHS---HHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-T CS
  Coatomer_E 180 gekiqdAyyifqelsekykstplllngkAvvslllgryeeAeslLkeaLdkda 232
                  ek+ +A+ i  + s+k ++++ ll  +A ++l l++y++A    + a+  d+
  KHJ33491.1 321 IEKYSEALEI--DQSNK-STNSKLLLNRALCHLRLKNYKAAIADCERAIILDP 370
                 4888999988..55788.789999999*************9877777665555 PP

>> TPR_20  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1      0.15        90       6      43 ..      88     125 ..      82     131 .. 0.90
   2 ?    6.3   0.0      0.02        12      18      48 ..     134     164 ..     128     189 .. 0.84
   3 ?    8.5   0.1    0.0041       2.4      15      60 ..     248     292 ..     238     304 .. 0.88
   4 ?    0.4   0.0       1.4   8.7e+02      31      61 ..     310     340 ..     307     350 .. 0.82
   5 ?   -2.2   0.1       9.2   5.5e+03      52      52 ..     403     403 ..     353     452 .. 0.56

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.15
      TPR_20   6 pelaeleaalaanpddldarldlAlallaagryeeAle 43 
                 + ++e  +a++ +p+      + A a++++g+y  Al+
  KHJ33491.1  88 KAIEEYTKAVQRQPSSATYLNNRAAAYISNGQYSLALD 125
                 57899999***************************998 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.02
      TPR_20  18 npddldarldlAlallaagryeeAleqLlei 48 
                 +p+d ++ l lA+ + + gr ++Al+  l+i
  KHJ33491.1 134 EPQDPKILLRLARIYTSLGRPQDALDTYLRI 164
                 79************************98876 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0041
      TPR_20  15 laanpddldarldlAlallaagryeeAleqLleilkrdrkweddaa 60 
                 l +n +d +a +   ++l a+g++++A++++ + l  d ++ +da+
  KHJ33491.1 248 LRTNNADPEALVLRGRVLSAQGENDKAITHFRQALNCDPDY-RDAV 292
                 568999*****************************999999.4444 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 1.4
      TPR_20  31 allaagryeeAleqLleilkrdrkweddaar 61 
                 ++++agr  eA+e+  e l+ d++ +    +
  KHJ33491.1 310 VDYKAGRFSEAIEKYSEALEIDQSNKSTNSK 340
                 68999*********99999999887665555 PP

  == domain 5  score: -2.2 bits;  conditional E-value: 9.2
      TPR_20  52 d 52 
                 d
  KHJ33491.1 403 D 403
                 1 PP

>> Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.2     0.098        58      11      32 ..      80     101 ..      79     104 .. 0.83
   2 ?   -0.6   0.0       2.3   1.4e+03       7      23 ..     110     126 ..     105     138 .. 0.72
   3 ?    1.1   0.0      0.72   4.3e+02      18      47 ..     272     301 ..     268     307 .. 0.72
   4 ?    4.3   0.0     0.071        42      12      37 ..     312     337 ..     311     339 .. 0.91
   5 ?    8.4   0.2    0.0036       2.2       7      38 ..     345     376 ..     340     383 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.098
                 HHHHT-HHHHHHHHHHHHHHTT CS
  Fis1_TPR_C  11 hyklgeYseArryvdalLeiEP 32 
                 hyk ++Y++A +      + +P
  KHJ33491.1  80 HYKAKDYKKAIEEYTKAVQRQP 101
                 9*********987777777766 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 2.3
                 HHHHHHHHT-HHHHHHH CS
  Fis1_TPR_C   7 lAlGhyklgeYseArry 23 
                  A +++  g+Ys A+  
  KHJ33491.1 110 RAAAYISNGQYSLALDD 126
                 68999999****99864 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.72
                 HHHHHHHHHHHHHTTS-HHHHHHHHHHHHH CS
  Fis1_TPR_C  18 seArryvdalLeiEPenrQaqsLkeliedk 47 
                 ++A    ++ L+++P+ r a +  ++++++
  KHJ33491.1 272 DKAITHFRQALNCDPDYRDAVKYLRIVQKQ 301
                 667777788999999999987766666655 PP

  == domain 4  score: 4.3 bits;  conditional E-value: 0.071
                 HHHT-HHHHHHHHHHHHHHTTS-HHH CS
  Fis1_TPR_C  12 yklgeYseArryvdalLeiEPenrQa 37 
                 yk g++seA +     Lei+ +n+  
  KHJ33491.1 312 YKAGRFSEAIEKYSEALEIDQSNKST 337
                 9*******************999875 PP

  == domain 5  score: 8.4 bits;  conditional E-value: 0.0036
                 HHHHHHHHT-HHHHHHHHHHHHHHTTS-HHHH CS
  Fis1_TPR_C   7 lAlGhyklgeYseArryvdalLeiEPenrQaq 38 
                  Al h++l++Y+ A   +++ + ++P+   a+
  KHJ33491.1 345 RALCHLRLKNYKAAIADCERAIILDPSYTKAR 376
                 6999*****************99999987776 PP

>> NARP1  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.1     0.081        49     201     253 ..      80     131 ..      69     160 .. 0.79
   2 ?   -0.8   0.0       0.9   5.4e+02      43      82 ..     260     302 ..     222     328 .. 0.63
   3 ?   13.2   0.7   5.2e-05     0.031     199     262 ..     346     409 ..     291     423 .. 0.78
   4 ?   -1.8   0.2       1.9   1.1e+03      50     101 ..     417     474 ..     410     486 .. 0.47

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.081
                 HHHHHT-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       NARP1 201 hydklgsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaevmeear 253
                 hy k ++++kA+e   ka++++p++  +  ++a  +   G+ + A +   +a 
  KHJ33491.1  80 HY-KAKDYKKAIEEYTKAVQRQPSSATYLNNRAAAYISNGQYSLALDDSIKAC 131
                 44.46788999999999999999999999999988888888777766555555 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.9
                 HHHHHHHHTT-HHHHHHHHHHHHHH-TT-C...HHHHHHHHHT CS
       NARP1  43 tkaelllkLgrkeeAeatyeaLlernpens...kYyeglekak 82 
                  ++++l + g++++A + +++ l+  p+ +   kY + ++k +
  KHJ33491.1 260 LRGRVLSAQGENDKAITHFRQALNCDPDYRdavKYLRIVQKQE 302
                 4566666666666666666666666665431114444444444 PP

  == domain 3  score: 13.2 bits;  conditional E-value: 5.2e-05
                 HHHHHHHT-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHCTTT-HHH CS
       NARP1 199 AqhydklgsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaevmeearklDlaDRyi 262
                 A  + +l++++ A+   ++ai  +p+ +    tKa+   ++Gd  +A++  +e ++lD  D  i
  KHJ33491.1 346 ALCHLRLKNYKAAIADCERAIILDPSYTKARKTKATATGQSGDWAGAVREWKELQELDPSDSSI 409
                 44455789999***********************************************999655 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 1.9
                 HTT-HHHHHHHHHHHH..HH-TT-CHHHHHHHHHT........SSS-HHHHHHHHHHTTT CS
       NARP1  50 kLgrkeeAeatyeaLl..ernpenskYyeglekak......klskedeeallalydelae 101
                 +L++k+  ++ y +Ll  e+ ++ s+  ++++ka       k  + d e  ++ ++++ e
  KHJ33491.1 417 ELEQKKSMRKDYYKLLgvEKDADASQIKKAYRKAAivhhpdK--NPDDETAEERFKDIGE 474
                 455566666666666522344444455555555554443221..2233333344444443 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3   0.00031      0.18     165     308 ..     142     283 ..     136     285 .. 0.81
   2 ?   -0.2   0.0      0.88   5.2e+02      86     116 ..     307     337 ..     291     368 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00031
    TPR_MalT 165 vllarialaqGdleeAetllekaeelaresnfhvdwlanaeevrvrlwlaqgdlaaaerwleaaelpsddd.nhflelelrnlar..vllalgryde.. 258
                 + lari+ + G+ ++A+++  +++  a ++++   + a+++ ++v+   a +d    + +l+a  + ++   + +++ ++ +l+r  v+l+ g+  +  
  KHJ33491.1 142 LRLARIYTSLGRPQDALDTYLRIDPPASAKDI-APAKAMLQHIQVA-EDALKDGTTGSMALHALDQAEKLLgTGVQRPRKWQLMRgeVYLKMGNVNSlg 238
                 56999999999999999999999999999999.5777788999985.8899998888889999877666543788777778888855667777776444 PP

    TPR_MalT 259 .AlellerLlkaaeelgrvrslieiliLqalalqaqgreeeAlaaLeqALe 308
                  A+ + ++Ll++  +        e+l+L+ ++l+aqg++++A+ + +qAL+
  KHJ33491.1 239 dAQNIAMSLLRTNNA------DPEALVLRGRVLSAQGENDKAITHFRQALN 283
                 499999999877554......45779***********************97 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.88
    TPR_MalT  86 qaeilvaqGrLheAletyeqalqlateqglq 116
                  +++  + Gr+ eA+e y +al+  + ++ +
  KHJ33491.1 307 EGNVDYKAGRFSEAIEKYSEALEIDQSNKST 337
                 5566666777777777777777755554443 PP

>> ChAPs  ChAPs (Chs5p-Arf1p-binding proteins)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00032      0.19     218     290 ..      88     160 ..      79     186 .. 0.93
   2 ?   -2.8   0.0         4   2.4e+03     222     266 ..     243     287 ..     234     298 .. 0.77
   3 ?   -1.9   0.0       2.1   1.3e+03     228     268 ..     333     373 ..     319     392 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00032
                 HHHHHHHHHH-SSS-HHHHHHHHHHHHHHSS--HHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHH CS
       ChAPs 218 davkllneeleeeekdaelLllqaefllskkkeelAlevakravksaPsefktWalLvkvYikledienALlt 290
                 +a++   ++++ ++++a  L  +a   +s+ +++lAl+ + +a  + P + k   +L+++Y++l+  ++AL t
  KHJ33491.1  88 KAIEEYTKAVQRQPSSATYLNNRAAAYISNGQYSLALDDSIKACLLEPQDPKILLRLARIYTSLGRPQDALDT 160
                 6788889999*******************************************************99999965 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 4
                 HHHHHH-SSS-HHHHHHHHHHHHHHSS--HHHHHHHHHHHHH-TT CS
       ChAPs 222 llneeleeeekdaelLllqaefllskkkeelAlevakravksaPs 266
                 +  + l+ ++ d e L+l+   l  + +++ A++  ++a ++ P 
  KHJ33491.1 243 IAMSLLRTNNADPEALVLRGRVLSAQGENDKAITHFRQALNCDPD 287
                 555667788888888888888888888888888888888888875 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 2.1
                 -SSS-HHHHHHHHHHHHHHSS--HHHHHHHHHHHHH-TT-H CS
       ChAPs 228 eeeekdaelLllqaefllskkkeelAlevakravksaPsef 268
                 ++++++++lLl +a   l  k+++ A++  +ra+ + Ps  
  KHJ33491.1 333 SNKSTNSKLLLNRALCHLRLKNYKAAIADCERAIILDPSYT 373
                 33344488888888888888888999999999998888865 PP

>> TPR_21  Tetratricopeptide repeat-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.5      0.31   1.9e+02     151     180 ..      75     104 ..      64     116 .. 0.74
   2 ?    0.2   0.0      0.86   5.2e+02     116     135 ..     141     160 ..     134     174 .. 0.86
   3 ?   10.6   0.1   0.00056      0.33     122     177 ..     234     286 ..     196     301 .. 0.70
   4 ?    6.0   0.1     0.015       8.9     152     181 ..     307     339 ..     287     356 .. 0.80
   5 ?   -2.8   0.2       7.1   4.2e+03      72      96 ..     423     447 ..     387     466 .. 0.55

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.31
      TPR_21 151 lrGDilvaqgkldeAraaYqaAlaaleeka 180
                   G+ +++ ++ ++A ++Y++A++++ ++a
  KHJ33491.1  75 CAGNKHYKAKDYKKAIEEYTKAVQRQPSSA 104
                 556667777888888888888888877664 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.86
      TPR_21 116 rlRLarvllaekkydeAlkt 135
                  lRLar++   +  ++Al t
  KHJ33491.1 141 LLRLARIYTSLGRPQDALDT 160
                 59***************987 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00056
      TPR_21 122 vllaekkydeAlktLeakkeeafaalvaelrGDilvaqgkldeAraaYqaAlaale 177
                 v    ++ + A+++L ++++   + ++  lrG +l+aqg++d+A +++++Al+   
  KHJ33491.1 234 VNSLGDAQNIAMSLLRTNNA---DPEALVLRGRVLSAQGENDKAITHFRQALNCDP 286
                 55555555555555554443...3455569*********************98655 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.015
      TPR_21 152 rGDilvaqgkldeAraaYqaAlaaleeka...r 181
                 +G++ ++ g++ eA ++Y++Al+  ++++   +
  KHJ33491.1 307 EGNVDYKAGRFSEAIEKYSEALEIDQSNKstnS 339
                 689999****************99888865551 PP

  == domain 5  score: -2.8 bits;  conditional E-value: 7.1
      TPR_21  72 taYaalaaLllAkaaveagdlaaAk 96 
                 +   ++ +Ll  ++ ++a ++++A 
  KHJ33491.1 423 SMRKDYYKLLGVEKDADASQIKKAY 447
                 3334444444444455555554443 PP

>> SRP_TPR_like  Putative TPR-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   1.0       2.7   1.6e+03      55      67 ..      80      92 ..      68     126 .. 0.64
   2 ?   -0.1   0.0       1.5   9.1e+02      30      64 ..     288     320 ..     282     322 .. 0.49
   3 ?   13.3   0.4   0.00011     0.065      27      65 ..     321     359 ..     319     366 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 2.7
  SRP_TPR_like 55 lYklkkykkalki 67
                  +Yk k ykka + 
    KHJ33491.1 80 HYKAKDYKKAIEE 92
                  5677777776543 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 1.5
  SRP_TPR_like  30 yeeaLkllkkgsalsedvrfEkaYvlYklkkykka 64 
                   y++a+k+l+  +  +e+++ E   v Yk  ++ +a
    KHJ33491.1 288 YRDAVKYLRIVQ-KQEKMKGE-GNVDYKAGRFSEA 320
                   555555554444.33333333.3345555555444 PP

  == domain 3  score: 13.3 bits;  conditional E-value: 0.00011
  SRP_TPR_like  27 lekyeeaLkllkkgsalsedvrfEkaYvlYklkkykkal 65 
                   +eky+eaL++ + ++++++++   +a  + +lk+yk+a 
    KHJ33491.1 321 IEKYSEALEIDQSNKSTNSKLLLNRALCHLRLKNYKAAI 359
                   79**********************************996 PP

>> SMG1  Serine/threonine-protein kinase smg-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.1   6.5e+02     321     336 ..     145     160 ..     144     209 .. 0.84
   2 ?    8.9   0.8   0.00072      0.43     508     621 ..     312     434 ..     264     440 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.1
        SMG1 321 nkLRTpLGkpqdTFtt 336
                  ++ T+LG+pqd   t
  KHJ33491.1 145 ARIYTSLGRPQDALDT 160
                 5788*******97554 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00072
        SMG1 508 qAaGkfekAaeeykelLkektevselkastrq.lkls.........ksesgedrktvllkdsecspevln.FvvaklmeCyqslgdWsslvewkqkele 595
                   aG+f +A+e+y+e L+ +++   ++++++  l+ +         k+   +  ++++l  s + + + +     +  +   ++ +W++l+e+  +  +
  KHJ33491.1 312 YKAGRFSEAIEKYSEALEIDQSN--KSTNSKLlLNRAlchlrlknyKAAIADCERAIILDPSYTKARKTKaTATGQSGDWAGAVREWKELQELDPSDSS 408
                 568**************997755..333333322222567799888555556666666666666666666367778889999***************** PP

        SMG1 596 lkedsedksfllrrdlvsnyirllsk 621
                 + ++ +++++ +++ + ++y +ll  
  KHJ33491.1 409 IAKELRTAELEQKKSMRKDYYKLLGV 434
                 ****9***********9999998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       710  (0.0396006); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        31  (0.00172904); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              30  [number of targets reported over threshold]
# CPU time: 0.74u 0.26s 00:00:01.00 Elapsed: 00:00:00.48
# Mc/sec: 3444.53
//
Query:       KHJ33492.1  [L=333]
Description: putative tbc domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-06   27.2   9.3    2.2e-05   22.9   8.9    2.3  2  SBE2      SBE2, cell-wall formation


Domain annotation for each model (and alignments):
>> SBE2  SBE2, cell-wall formation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    0.6   2.8    0.0069   1.2e+02     183     259 ..     156     233 ..      64     258 .. 0.70
   2 !   22.9   8.9   1.2e-09   2.2e-05     444     487 ..     274     317 ..     105     326 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.0069
        SBE2 183 vsestkdGsksalsksi.sv.ndtsaeksmnkarksyqeqfsskksqssllnlrqrsraksdkrsstlynlsnstsaiv 259
                  s+s +  ++++ ++ i s+ n tsa+ +  +  +s+     s++s++ l ++ ++s+++  + s+ +y+ls  t+++ 
  KHJ33492.1 156 HSKSITTSPERQIKRNIkSFgNGTSAQPAEQGELRSPI-WAKSQDSTGKLSSSGKQSNTRAMSWSTAMYDLSLETKRLT 233
                 34444444444443333255233444444444444443.4467788899999999999999999999999998888764 PP

  == domain 2  score: 22.9 bits;  conditional E-value: 1.2e-09
        SBE2 444 Gmedlilvsenkldvvshsrpswlppkdpeekklherqisksls 487
                  m d + +s++k  v+s +rpswlppkdp e k h ++ +k ++
  KHJ33492.1 274 MMIDPLPISKEKEAVLSRTRPSWLPPKDPAEEKRHIKEYQKMMA 317
                 5889999********************************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       722  (0.04027); expected 358.6 (0.02)
Passed bias filter:                      527  (0.0293937); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2381.42
//
Query:       KHJ33493.1  [L=132]
Description: putative mpr-like gpcr protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-30  106.9   2.7    1.4e-30  106.7   2.7    1.1  1  HlyIII    Haemolysin-III related
  ------ inclusion threshold ------
       0.52    9.9   7.8       0.16   11.5   3.0    2.0  2  DUF998    Protein of unknown function (DUF998)


Domain annotation for each model (and alignments):
>> HlyIII  Haemolysin-III related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.7   2.7   1.6e-34   1.4e-30     113     224 .]       1     112 [.       1     112 [. 0.97

  Alignments for each domain:
  == domain 1  score: 106.7 bits;  conditional E-value: 1.6e-34
      HlyIII 113 lilalgvlgiisklvplfsrpearplravlfillgllgvipllhlllvltqlgeaa.elalvllvlggvlylvGavfYalrvPErlkpgkfdivghsHq 210
                 +i +lg+++  ++++++f++p++rp+ra +fi++gl++++p++h  l l++l+ ++ ++ l+ lvl+g++y++Ga +Ya+r+PErl pg fdi+g+sHq
  KHJ33493.1   1 MIFTLGLACAAVTVFDRFRTPAWRPYRATMFIAMGLSAIFPVIH-GLKLYGLQGMQsRMGLKELVLEGIFYILGACLYAARWPERLNPGLFDIWGSSHQ 98 
                 57899***************************************.888888998999****************************************** PP

      HlyIII 211 iFHvfvvlgalfhy 224
                 iFH++v+++a fh+
  KHJ33493.1  99 IFHILVLIAAGFHF 112
                 **********9996 PP

>> DUF998  Protein of unknown function (DUF998)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   3.0   1.8e-05      0.16     112     179 ..       3      73 ..       1      79 [. 0.78
   2 ?    3.2   0.8    0.0065        58      46      94 ..      69     118 ..      49     132 .] 0.49

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 1.8e-05
      DUF998 112 aflalavavllla..saarrrawallrlvggvallllvaalvwllaa...aldgslllGlaerllvlaitawl 179
                 +   l +a+++++   ++r +aw+ +r++ ++a+ l +++ v ++++     + ++++Gl e +l  +++++ 
  KHJ33493.1   3 FT--LGLACAAVTvfDRFRTPAWRPYRATMFIAMGLSAIFPVIHGLKlygLQGMQSRMGLKELVLEGIFYILG 73 
                 44..445555555559999999999999999999999999999999999777778889999999988887765 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.0065
      DUF998  46 lvllgllvlalavgllra..argragragrlllavaglglvlag..vfptdpg 94 
                 +++lg+++ a  +    +   +g    +g+   +   l l++ag  +f + ++
  KHJ33493.1  69 FYILGACLYAARW--P-ErlNPGLFDIWGSSHQIFHILVLIAAGfhFFSLRTA 118
                 3333333333222..1.123444444555555555555555555444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1027.13
//
Query:       KHJ33494.1  [L=639]
Description: putative at hook domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.07   13.4   3.3       0.45   10.8   3.3    2.4  1  Rx_N      Rx N-terminal domain


Domain annotation for each model (and alignments):
>> Rx_N  Rx N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   3.3   2.5e-05      0.45       9      76 ..     497     564 ..     494     583 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 2.5e-05
        Rx_N   9 LadllaeeakllkgvkeeleklkdeLesiqavLedaeerqikdeavkeWlkelrdlaydaeDvlDefe 76 
                 L+  l ee k+  +++ee+ ++++e e++   L++  +++ + e   + l++l ++++++e  +D  +
  KHJ33494.1 497 LERRLREEQKKKLHLREEIMRIRKEREQVARQLDEIRQKHSQAEKETMYLENLNNAIHNLELTMDIAR 564
                 6678999*****************************************************98888655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (639 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2232  (0.124491); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.42
# Mc/sec: 4531.08
//
Query:       KHJ33495.1  [L=238]
Description: hypothetical protein EV44_g3337 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       697  (0.0388756); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1752.97
//
Query:       KHJ33496.1  [L=1072]
Description: putative phosphatidylserine decarboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.3e-55  186.1   0.0    9.2e-55  185.3   0.0    1.3  1  PS_Dcarbxylase  Phosphatidylserine decarboxylase
    1.9e-36  124.4   0.0    6.2e-18   65.0   0.0    2.5  2  C2              C2 domain
  ------ inclusion threshold ------
      0.062   13.8   0.4       0.23   11.9   0.1    2.1  2  EF-hand_7       EF-hand domain pair
       0.12   12.0   0.0       0.44   10.2   0.0    2.1  1  EF-hand_1       EF hand


Domain annotation for each model (and alignments):
>> PS_Dcarbxylase  Phosphatidylserine decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.3   0.0   2.1e-58   9.2e-55       1     188 [.     820    1014 ..     820    1021 .. 0.97

  Alignments for each domain:
  == domain 1  score: 185.3 bits;  conditional E-value: 2.1e-58
  PS_Dcarbxylase    1 lneffvrklkdgaRpi..dddpgaivsPaDgrilqigeieegsviqvKgityslrdLlgeasessadsfkngyfvviyLspgdyHryhaPvsg 91  
                      +neff rklk+g Rp   +++pg +vsPaD+r + + +i + + i+vKg +++++ Llg+a +++a+++kng + +++L+p+dyHr+h+Pv+g
      KHJ33496.1  820 FNEFFFRKLKPGSRPCsaPENPGIVVSPADCRSVVFNRIGDATQIWVKGREFTVERLLGNAYPQYAKNYKNGALGIFRLAPQDYHRFHVPVDG 912 
                      8***************98999999********************************************************************* PP

  PS_Dcarbxylase   92 kveerrhipGellsvnpsalkelrglftlneRvvlview..kGkvavvpvGatnvgsivlnvlkgdelkkGeelGyFqf.GStvvlvfeag.. 179 
                      ++e+ ++i+Ge+++vnp+a+++  +++ +n Rvv+ i++  +G+v+v+ vGa++vgs v+  ++g+++k+ eelGyF+f GSt+ l+fe+g  
      KHJ33496.1  913 VLEKPKTIEGEYYTVNPMAIRSALDVYGENVRVVIPINSvaHGRVIVICVGAMMVGSTVIVRKEGEHVKRAEELGYFKFgGSTILLLFEEGmm 1005
                      **************************************6679***********************************************9988 PP

  PS_Dcarbxylase  180 kfieslvek 188 
                      +f+e+lv +
      KHJ33496.1 1006 QFDEDLVAN 1014
                      777777765 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.0   0.0   1.4e-21   6.2e-18       2     103 .]      50     152 ..      49     152 .. 0.93
   2 !   56.9   0.0   4.5e-19     2e-15       3      96 ..     268     365 ..     266     373 .. 0.86

  Alignments for each domain:
  == domain 1  score: 65.0 bits;  conditional E-value: 1.4e-21
                 EEEEEEEEEESSSSSSTTSSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHH...HHTTHHH CS
          C2   2 klevtvieAknLpnkdkkgssdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplst...llsgeea 97 
                 +l++ vi+A+nL++kdk+g sdpy + +l g++++ T  i ++lnP Wn  +++++++ ++ +L   ++d+dr +k+d +G++ + +++    +++e +
  KHJ33496.1  50 ILKIMVIKARNLAAKDKNGLSDPYLTFTL-GDSRHSTYSIAKTLNPSWNVLIQMPISDTNSMVLNCVCWDKDR-FKKDYMGEFDLAIDDifsTNKTELE 146
                 699**************************.*******************************************.89999**********6666666666 PP

                 HEEEEH CS
          C2  98 egwypl 103
                  +w+pl
  KHJ33496.1 147 PKWFPL 152
                 699986 PP

  == domain 2  score: 56.9 bits;  conditional E-value: 4.5e-19
                 EEEEEEEEESSSSSST....TSSCEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESC.HTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHHTTHH CS
          C2   3 levtvieAknLpnkdk....kgssdpyvkvsldgkqkakTrviknslnPvWnekftfevae.leeakLeveVfdndrlskddfiGkveiplstllsgee 96 
                 + +++++  +Lp+ +     +  +dp+  +sl gk++++Trvi+ +lnPv++ek+ f+v + +++ +  ++V d+d+ls++df+  + +pl+ l ++++
  KHJ33496.1 268 VFLEIHKIIDLPPEKNvtrtSFDMDPFLIASL-GKKTQRTRVIRHNLNPVFDEKMIFQVLKhEQTYSFSFTVIDRDKLSGNDFVASTLLPLKALIDRAP 365
                 668899999**666334554445*********.************************88777*****************************99666554 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   5.1e-05      0.23       7      65 ..     505     562 ..     496     564 .. 0.81
   2 ?   -3.2   0.0       2.7   1.2e+04      21      46 ..     769     796 ..     764     801 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 5.1e-05
   EF-hand_7   7 aFkelDtdgdgyldkeellrllrkifqgagegsklsdeelellfkef..DtdkdG...visfdE 65 
                 + +++D+d +++++k el  +l         gs l +  ++ +f  f   +++d    ++sfdE
  KHJ33496.1 505 MLRQYDSDESNRISKVELTTMLD------TLGSTLKESTIDSWFSRFsnSSNCDEtspELSFDE 562
                 5688*************998888......8999999999******9977666665555666666 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2.7
   EF-hand_7  21 keellrllrkifqga..gegsklsdeel 46 
                 k  +++llr+++q+     ++++s+ e+
  KHJ33496.1 769 KKRIRKLLRSLSQKQgvKYDDPTSRAEI 796
                 5557789999998877777777777666 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   9.9e-05      0.44       2      27 ..     502     527 ..     501     529 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 9.9e-05
                 HHHHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkellk 27 
                 ++ + r +D D + +I++ E+ ++l 
  KHJ33496.1 502 WRSMLRQYDSDESNRISKVELTTMLD 527
                 789*******************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1072 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       756  (0.0421663); expected 358.6 (0.02)
Passed bias filter:                      613  (0.0341904); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.77u 0.20s 00:00:00.97 Elapsed: 00:00:00.40
# Mc/sec: 8058.67
//
Query:       KHJ33497.1  [L=292]
Description: putative coatomer subunit epsilon [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.3e-53  180.6  11.3    4.9e-53  180.4  11.3    1.0  1  Coatomer_E    Coatomer epsilon subunit
    1.1e-08   35.5   9.8    0.00023   21.6   1.4    3.8  4  TPR_19        Tetratricopeptide repeat
    4.6e-07   29.8   3.0       0.47   11.2   0.2    4.5  4  TPR_4         Tetratricopeptide repeat
    1.1e-06   28.8   1.0       0.81    9.9   0.1    3.7  4  ANAPC3        Anaphase-promoting complex, cyclosome, subunit 
      7e-06   26.4   4.1       0.21   12.5   0.0    5.4  5  TPR_14        Tetratricopeptide repeat
      4e-05   23.4   2.3       0.15   12.3   0.0    5.6  6  TPR_2         Tetratricopeptide repeat
    0.00025   20.7   0.4       0.58   10.1   0.0    4.7  5  TPR_1         Tetratricopeptide repeat
     0.0004   20.6   7.7        1.2    9.4   0.6    5.1  5  TPR_12        Tetratricopeptide repeat
    0.00068   19.7   1.2       0.19   11.7   0.0    3.1  3  SRP_TPR_like  Putative TPR-like repeat
     0.0025   18.4   1.7          2    9.1   0.1    3.9  4  TPR_16        Tetratricopeptide repeat
     0.0044   16.8   1.9        3.8    7.5   0.1    4.3  5  TPR_10        Tetratricopeptide repeat
     0.0046   17.1   0.2          5    7.6   0.0    4.2  4  TPR_8         Tetratricopeptide repeat
  ------ inclusion threshold ------
       0.01   16.4   1.0        3.3    8.5   0.0    4.1  3  TPR_6         Tetratricopeptide repeat
      0.029   14.8   0.2      0.074   13.4   0.2    1.7  1  RuvX          Holliday junction resolvase
      0.032   13.9   6.7      0.054   13.2   0.2    3.1  3  TPR_21        Tetratricopeptide repeat-like domain
      0.048   13.4   0.8        1.3    8.7   0.1    2.7  3  DUF4423       Domain of unknown function (DUF4423)
       0.14   11.9   1.0         14    5.5   0.1    3.9  5  TPR_11        TPR repeat


Domain annotation for each model (and alignments):
>> Coatomer_E  Coatomer epsilon subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.4  11.3   4.7e-56   4.9e-53       2     289 ..       7     285 ..       6     286 .. 0.94

  Alignments for each domain:
  == domain 1  score: 180.4 bits;  conditional E-value: 4.7e-56
                 X-TTHHHHHHHHTT-HHHHHHHHHS---SHHHHHHHHHHHHHHHHHTT-HHHHHHHS-TTS-HHHHHHHHHHHHHH-STTHHHHHHHHHHHHHS----S CS
  Coatomer_E   2 sdeLfdvrnefYlGaYqkaineadvaslseeekeerdvylyrsylAlgsaqiviseIkesaatelqAvrllaeylnspsrkeeilaelkeeladseies 100
                  deL  + n+f+ G Y k++ e++++ ++e++k    v++ r+++A+g+ ++v +e+k+++ +e  A+r+l e      ++ e+l e+++     + ++
  KHJ33497.1   7 DDELLTLYNTFHQGQYEKVL-ETNIEAMKEDNKIASHVLILRAKIAMGEFEEVFEEVKAATQPEHVAIRALVEITRG--NHTEALREIENL----QTVK 98 
                 599*****************.8***************************************************9999..677778777543....3323 PP

                 -HHHHHHHHHHHHHTT-HHHHHHHHTT-.-SHHHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHS- CS
  Coatomer_E 101 nevlrllaaivflkegdfddalkllkks.enLeavAlkvqillklhrvdlAekelkkmqdidedatltQLAqawvklavggekiqdAyyifqelsekyk 198
                   v  +l ++v+  +g+ ++al ll+   +nLeavAl vqi+l+ +r+dlA ke+  ++++++d+ l  LA++wv l  gg+k+q+A+y+f+el++ ++
  KHJ33497.1  99 -GVTIVLVGTVLHLAGKTEEALALLETHeGNLEAVALIVQIHLQQNRIDLALKEVSAAKKWAQDNLLINLADSWVGLRIGGDKYQQAFYVFEELAQAFS 196
                 .37778999999*************99989********************************************************************* PP

                 --H.HHHHHHHHHHHHTT-HHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT--HHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHHHHHHHH CS
  Coatomer_E 199 stp.lllngkAvvslllgryeeAeslLkeaLdkdakdeetLiNlvvaaqhlgkdaevsernlsqlklshpehklvkdlnekeaeFdrlvlqf 289
                 +t+   l  +A+ +++lgr +eAe  L++ L kd+ ++ +++N +v+++  gk+   +++ + +l    ++h + +d++ek+a Fd+++l++
  KHJ33497.1 197 TTSsQNLVSQAISEIHLGRLDEAEAALQQVLTKDKDYKLAIVNNIVLSTISGKN---VDQLVDELEAIDSDHIFLRDMREKDALFDQAALKY 285
                 99725799**********************************************...999****************************9987 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.98     1e+03      29      43 ..      43      57 ..      17      70 .. 0.54
   2 ?   -1.0   0.0       2.5   2.6e+03      36      45 ..      79      88 ..      51      96 .. 0.57
   3 !   21.6   1.4   2.2e-07   0.00023       4      57 ..     112     161 ..     109     167 .. 0.94
   4 !   16.1   0.3   1.1e-05     0.012       6      57 ..     180     232 ..     176     237 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.98
      TPR_19 29 llLAeallalgqlde 43
                 l  +a +a+g+++e
  KHJ33497.1 43 VLILRAKIAMGEFEE 57
                223566666666665 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.5
      TPR_19 36 lalgqldeAe 45
                +  g+ +eA 
  KHJ33497.1 79 ITRGNHTEAL 88
                4444444444 PP

  == domain 3  score: 21.6 bits;  conditional E-value: 2.2e-07
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpd 57 
                 +g+ +eAlalle       +n+ea +l ++++l+++++d A + ++a+ ++++d
  KHJ33497.1 112 AGKTEEALALLET----HEGNLEAVALIVQIHLQQNRIDLALKEVSAAKKWAQD 161
                 799**********....9***********************************9 PP

  == domain 4  score: 16.1 bits;  conditional E-value: 1.1e-05
      TPR_19   6 dyaeAlalleqalqedpk...naearllLAeallalgqldeAealLdalpeedpd 57 
                 +y++A   +e++ q+      +  +    A+  + lg+ldeAea+L++++ +d+d
  KHJ33497.1 180 KYQQAFYVFEELAQAFSTtssQNLVS--QAISEIHLGRLDEAEAALQQVLTKDKD 232
                 68888788888766644432122222..38999*******************999 PP

>> TPR_4  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.054        57       5      25 ..      72      92 ..      68      93 .. 0.84
   2 !   10.8   0.1   0.00063      0.66       9      25 ..     107     123 ..     106     124 .. 0.92
   3 ?   -1.6   0.0         6   6.3e+03      10      21 ..     138     149 ..     136     149 .. 0.81
   4 !   11.2   0.2   0.00044      0.47       7      26 .]     206     225 ..     203     225 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.054
       TPR_4  5 laLArallalGdldeAralle 25
                + +A +   +G++ eA++  e
  KHJ33497.1 72 AIRALVEITRGNHTEALREIE 92
                678999999********9876 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00063
       TPR_4   9 rallalGdldeAralle 25 
                  +l+++G  +eA+alle
  KHJ33497.1 107 TVLHLAGKTEEALALLE 123
                 69**************9 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 6
       TPR_4  10 allalGdldeAr 21 
                  +l++ + d A+
  KHJ33497.1 138 IHLQQNRIDLAL 149
                 689999999885 PP

  == domain 4  score: 11.2 bits;  conditional E-value: 0.00044
       TPR_4   7 LArallalGdldeAraller 26 
                 +A    +lG+ldeA+a+l++
  KHJ33497.1 206 QAISEIHLGRLDEAEAALQQ 225
                 5777789**********987 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0    0.0032       3.4      23      75 ..       6      58 ..       1      65 [. 0.86
   2 ?    5.5   0.0     0.019        20      23      81 ..      68     124 ..      58     125 .. 0.77
   3 !    7.0   0.0    0.0064       6.7      28      77 ..     104     150 ..     100     155 .. 0.86
   4 !    9.9   0.1   0.00077      0.81      38      81 ..     180     225 ..     178     237 .. 0.86

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0032
                HHHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT-HHHH CS
      ANAPC3 23 pedayllAlclylngqykrAyellrkaklnskslgcrylfAqcllkLkkyeeA 75
                ++d +l  +  +++gqy++ +e   +a ++++ +++++l+ ++ ++++++ee 
  KHJ33497.1  6 LDDELLTLYNTFHQGQYEKVLETNIEAMKEDNKIASHVLILRAKIAMGEFEEV 58
                566666667789***************9999999***************9996 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.019
                 HHHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHT.T-HHHHHHHH-S CS
      ANAPC3  23 pedayllAlclylngqykrAyellrkaklnskslgcrylfAqcllkL.kkyeeAiaaLek 81 
                 pe++   Al+   +g++++A++ ++++    + +g+ +++  + l L +k eeA+a+Le 
  KHJ33497.1  68 PEHVAIRALVEITRGNHTEALREIENL---QTVKGVTIVLVGTVLHLaGKTEEALALLET 124
                 666666788888899999999999999...455577777777777777*******99985 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0064
                 HHHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHHHTT-HHHHHH CS
      ANAPC3  28 llAlclylngqykrAyellrkaklnskslgcrylfAqcllkLkkyeeAia 77 
                 l + +l l+g+ ++A+ ll+++   + +l++  l+ q  l++++++ A++
  KHJ33497.1 104 LVGTVLHLAGKTEEALALLETH---EGNLEAVALIVQIHLQQNRIDLALK 150
                 66889999**************...8999999999999999999987775 PP

  == domain 4  score: 9.9 bits;  conditional E-value: 0.00077
                 -HHHHHHHHHCT.SHHHC-H.HHHHHHHHHHHHTT-HHHHHHHH-S CS
      ANAPC3  38 qykrAyellrka.klnsksl.gcrylfAqcllkLkkyeeAiaaLek 81 
                 +y++A+++++++ +  s++  + ++  A + + L++++eA+aaL+ 
  KHJ33497.1 180 KYQQAFYVFEELaQAFSTTSsQNLVSQAISEIHLGRLDEAEAALQQ 225
                 89**********77777666577777778889***********986 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0       0.3   3.2e+02       7      38 ..      45      74 ..      40      79 .. 0.79
   2 ?    2.8   0.0      0.26   2.8e+02       6      25 ..      73      92 ..      68      95 .. 0.82
   3 ?    2.5   0.0      0.32   3.4e+02       9      25 ..     107     123 ..     102     126 .. 0.85
   4 ?    3.2   0.2      0.19     2e+02       2      29 ..     130     156 ..     129     169 .. 0.77
   5 !   12.5   0.0    0.0002      0.21       8      36 ..     207     235 ..     203     239 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.3
      TPR_14  7 laeallalGdpdeAiallrralalaPddaeaw 38
                +++a  a G+++e  +  ++a +  P++ +++
  KHJ33497.1 45 ILRAKIAMGEFEEVFEEVKAATQ--PEHVAIR 74
                57888999****99999999965..8877665 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.26
      TPR_14  6 alaeallalGdpdeAiallr 25
                 +a ++ ++G++ eA++  +
  KHJ33497.1 73 IRALVEITRGNHTEALREIE 92
                6789999********99765 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.32
      TPR_14   9 eallalGdpdeAiallr 25 
                  +l  +G+++eA+all+
  KHJ33497.1 107 TVLHLAGKTEEALALLE 123
                 678889*********98 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.19
      TPR_14   2 eallalaeallalGdpdeAiallrrala 29 
                 ea +++++++l++ + d A++   +a +
  KHJ33497.1 130 EAVALIVQIHLQQNRIDLALKEVSAA-K 156
                 7889999*************999988.3 PP

  == domain 5  score: 12.5 bits;  conditional E-value: 0.0002
      TPR_14   8 aeallalGdpdeAiallrralalaPddae 36 
                 a  + +lG++deA+a+l+++l ++ d   
  KHJ33497.1 207 AISEIHLGRLDEAEAALQQVLTKDKDYKL 235
                 566789****************9998765 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0       2.6   2.7e+03      12      19 ..      17      24 ..      17      28 .. 0.76
   2 ?   -0.3   0.0       1.4   1.5e+03       8      25 ..      75      92 ..      73      94 .. 0.77
   3 ?    2.3   0.0      0.21   2.2e+02       8      25 ..     106     123 ..     103     124 .. 0.85
   4 ?    1.4   0.1      0.42   4.5e+02       9      30 ..     137     158 ..     137     162 .. 0.79
   5 ?   -0.4   0.1       1.6   1.7e+03      16      29 ..     180     193 ..     178     197 .. 0.83
   6 !   12.3   0.0   0.00014      0.15       7      33 ..     206     232 ..     202     233 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 2.6
       TPR_2 12 yklgdyee 19
                +++g+ye+
  KHJ33497.1 17 FHQGQYEK 24
                57999998 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 1.4
       TPR_2  8 GlayyklgdyeeAleafe 25
                +l+ + +g++ eAl+  e
  KHJ33497.1 75 ALVEITRGNHTEALREIE 92
                66667789*****98765 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.21
       TPR_2   8 GlayyklgdyeeAleafe 25 
                 G ++  +g+ eeAl+++e
  KHJ33497.1 106 GTVLHLAGKTEEALALLE 123
                 6788899*******9987 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.42
       TPR_2   9 layyklgdyeeAleafekAlel 30 
                 ++++++++ + Al+   +A + 
  KHJ33497.1 137 QIHLQQNRIDLALKEVSAAKKW 158
                 5899*********988777665 PP

  == domain 5  score: -0.4 bits;  conditional E-value: 1.6
       TPR_2  16 dyeeAleafekAle 29 
                 +y++A   fe+  +
  KHJ33497.1 180 KYQQAFYVFEELAQ 193
                 89999999999876 PP

  == domain 6  score: 12.3 bits;  conditional E-value: 0.00014
       TPR_2   7 lGlayyklgdyeeAleafekAleldPn 33 
                 ++ + ++lg+++eA++a++++l  d +
  KHJ33497.1 206 QAISEIHLGRLDEAEAALQQVLTKDKD 232
                 5777899***************99876 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.33   3.4e+02      12      22 ..      17      27 ..      17      36 .. 0.80
   2 ?   -2.7   0.0       5.8   6.1e+03      13      21 ..      80      88 ..      74      89 .. 0.73
   3 ?    1.9   0.0       0.2   2.2e+02       8      24 ..     106     122 ..     104     124 .. 0.85
   4 ?    0.4   0.0      0.61   6.4e+02      10      22 ..     138     150 ..     137     150 .. 0.89
   5 !   10.1   0.0   0.00055      0.58      13      34 .]     212     233 ..     205     233 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.33
                HHTT-HHHHHH CS
       TPR_1 12 fklgkydeAle 22
                f++g+y++ le
  KHJ33497.1 17 FHQGQYEKVLE 27
                67999999887 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 5.8
                HTT-HHHHH CS
       TPR_1 13 klgkydeAl 21
                  g++ eAl
  KHJ33497.1 80 TRGNHTEAL 88
                579999998 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.2
                 HHHHHHTT-HHHHHHHH CS
       TPR_1   8 GnayfklgkydeAleyy 24 
                 G +++  gk +eAl+  
  KHJ33497.1 106 GTVLHLAGKTEEALALL 122
                 7889999******9865 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.61
                 HHHHTT-HHHHHH CS
       TPR_1  10 ayfklgkydeAle 22 
                 +++++++ d Al+
  KHJ33497.1 138 IHLQQNRIDLALK 150
                 899********96 PP

  == domain 5  score: 10.1 bits;  conditional E-value: 0.00055
                 HTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  13 klgkydeAleyyekALelnPnn 34 
                 +lg++deA+++ +++L+ + ++
  KHJ33497.1 212 HLGRLDEAEAALQQVLTKDKDY 233
                 79**************999875 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0       0.8   8.5e+02      14      49 ..      17      50 ..      15      57 .. 0.67
   2 ?    1.6   0.0      0.33   3.5e+02       9      24 ..      74      89 ..      70      97 .. 0.81
   3 !    8.0   0.0    0.0033       3.4      51      69 ..     105     123 ..      98     130 .. 0.67
   4 ?   -0.6   0.0       1.6   1.7e+03       9      29 ..     135     155 ..     128     164 .. 0.69
   5 !    9.4   0.6    0.0012       1.2      47      72 ..     202     227 ..     177     232 .. 0.56

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.8
      TPR_12 14 rrlgrydeAlellekaleiarrllGpdhpltattlr 49
                +++g+y++ le   +a+   +++    h l +++ +
  KHJ33497.1 17 FHQGQYEKVLETNIEAMKEDNKI--ASHVLILRAKI 50
                57888888888777777766666..56666655555 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.33
      TPR_12  9 laavlrrlgrydeAle 24
                +a+v+  +g+++eAl+
  KHJ33497.1 74 RALVEITRGNHTEALR 89
                5888889999999997 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0033
      TPR_12  51 LgrlyralgryeeAlelle 69 
                  g++++++g++eeAl+lle
  KHJ33497.1 105 VGTVLHLAGKTEEALALLE 123
                 4666666666666666665 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 1.6
      TPR_12   9 laavlrrlgrydeAlelleka 29 
                 + ++++++ r d Al+   +a
  KHJ33497.1 135 IVQIHLQQNRIDLALKEVSAA 155
                 556777888888888766666 PP

  == domain 5  score: 9.4 bits;  conditional E-value: 0.0012
      TPR_12  47 tlrnLgrlyralgryeeAlelleeal 72 
                  l   ++    lgr++eA+++l+++l
  KHJ33497.1 202 NLVSQAISEIHLGRLDEAEAALQQVL 227
                 44444444455566666666666555 PP

>> SRP_TPR_like  Putative TPR-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.49   5.1e+02      95     115 ..      14      34 ..       8      38 .. 0.89
   2 !   11.7   0.0   0.00018      0.19       3     112 ..      57     168 ..      52     170 .. 0.91
   3 ?    4.1   0.0     0.042        44      28      77 ..     179     232 ..     172     244 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.49
  SRP_TPR_like  95 YklLskekkedelvvNllAvd 115
                   Y++  + ++e+ l+ N+ A++
    KHJ33497.1  14 YNTFHQGQYEKVLETNIEAMK 34 
                   999999999********9997 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00018
  SRP_TPR_like   3 eeyekilrlegkelkkfkvvaliklekyeeaLkllkkgsalsedvrfEkaYvlYklkkykkalkilkkveaeekvkvlksqvlYrlgsyekAYklLs 99 
                   e +e++  + ++e    +++  i+ + ++eaL+ +++ +++ + +++    vl    k ++al +l+  e++ ++  l  q+    +  + A k +s
    KHJ33497.1  57 EVFEEVKAATQPEHVAIRALVEITRGNHTEALREIENLQTVKGVTIVLVGTVLHLAGKTEEALALLETHEGNLEAVALIVQIHLQQNRIDLALKEVS 153
                   67899999999999999*******************************************************99999***************99996 PP

  SRP_TPR_like 100 kekk..edelvvNll 112
                     kk  +d+l +Nl+
    KHJ33497.1 154 AAKKwaQDNLLINLA 168
                   555433889999985 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.042
  SRP_TPR_like  28 ekyeeaLkllkkgs....alsedvrfEkaYvlYklkkykkalkilkkveaeekv 77 
                   +ky++a  + ++      ++s++  + +a  + +l ++ +a   l++v +++k 
    KHJ33497.1 179 DKYQQAFYVFEELAqafsTTSSQNLVSQAISEIHLGRLDEAEAALQQVLTKDKD 232
                   788888887777665666888899999999999999999999999998887754 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       2.2   2.3e+03       5      20 ..      76      91 ..      68      97 .. 0.60
   2 ?    1.5   0.1      0.45   4.7e+02      41      61 ..     106     126 ..     103     133 .. 0.76
   3 ?    4.7   0.3     0.047        49      22      64 ..     120     158 ..     112     162 .. 0.69
   4 !    9.1   0.1    0.0019         2       4      27 ..     207     230 ..     204     236 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 2.2
      TPR_16  5 raalragdyddAaaal 20
                +  + +g+ ++A++  
  KHJ33497.1 76 LVEITRGNHTEALREI 91
                3344455555555544 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.45
      TPR_16  41 gdaalrqgrlaeAaalyraal 61 
                 g ++  +g  +eA+al++ + 
  KHJ33497.1 106 GTVLHLAGKTEEALALLETHE 126
                 667788888999998888765 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.047
      TPR_16  22 aalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraa 64 
                 a+l+ +     + eA  l  +++l+q+r ++A+  + aa + +
  KHJ33497.1 120 ALLETH---EGNLEAVALIVQIHLQQNRIDLALKEVSAA-KKW 158
                 444444...667778888889999999999999888777.455 PP

  == domain 4  score: 9.1 bits;  conditional E-value: 0.0019
      TPR_16   4 araalragdyddAaaaleaalkrd 27 
                 a + + +g+ d+A+aal+++l +d
  KHJ33497.1 207 AISEIHLGRLDEAEAALQQVLTKD 230
                 566666799999999999999887 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       3.7   3.9e+03      25      38 ..      22      35 ..      21      37 .. 0.68
   2 ?    0.9   0.0      0.43   4.5e+02      14      24 ..      80      90 ..      75      96 .. 0.79
   3 ?    3.9   0.0     0.048        51       9      26 ..     106     123 ..     105     124 .. 0.90
   4 ?   -3.4   0.0       9.4   9.9e+03      12      22 ..     139     149 ..     137     151 .. 0.76
   5 !    7.5   0.1    0.0036       3.8      14      30 ..     212     228 ..     207     230 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 3.7
      TPR_10 25 leealairrrllGp 38
                +e++l++  ++  +
  KHJ33497.1 22 YEKVLETNIEAMKE 35
                68888877776655 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.43
      TPR_10 14 qrgrydeAeal 24
                 rg+++eA++ 
  KHJ33497.1 80 TRGNHTEALRE 90
                69******986 PP

  == domain 3  score: 3.9 bits;  conditional E-value: 0.048
      TPR_10   9 analrqrgrydeAealle 26 
                 + +l+  g+ +eA+alle
  KHJ33497.1 106 GTVLHLAGKTEEALALLE 123
                 7789999*********98 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 9.4
      TPR_10  12 lrqrgrydeAe 22 
                 + q++r d A+
  KHJ33497.1 139 HLQQNRIDLAL 149
                 77999998877 PP

  == domain 5  score: 7.5 bits;  conditional E-value: 0.0036
      TPR_10  14 qrgrydeAealleeala 30 
                 ++gr+deAea l+++l 
  KHJ33497.1 212 HLGRLDEAEAALQQVLT 228
                 68************995 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       3.7   3.9e+03       5      19 ..      43      57 ..      40      66 .. 0.76
   2 ?   -0.8   0.0       2.3   2.4e+03       8      25 ..     106     123 ..     103     124 .. 0.77
   3 ?    3.7   0.0     0.085        90       3      33 ..     131     161 ..     129     162 .. 0.84
   4 !    7.6   0.0    0.0048         5      13      29 ..     212     228 ..     207     233 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 3.7
                HHHHHHHHHTT-HHH CS
       TPR_8  5 ynlgsiylklgdyee 19
                +++ ++ + +g++ee
  KHJ33497.1 43 VLILRAKIAMGEFEE 57
                677888888999887 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 2.3
                 HHHHHHTT-HHHHHHHHH CS
       TPR_8   8 gsiylklgdyeeAkeyye 25 
                 g +++  g+ eeA + +e
  KHJ33497.1 106 GTVLHLAGKTEEALALLE 123
                 5667778999***98876 PP

  == domain 3  score: 3.7 bits;  conditional E-value: 0.085
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 a  ++ +i+l++++++ A +    a ++++d
  KHJ33497.1 131 AVALIVQIHLQQNRIDLALKEVSAAKKWAQD 161
                 667899************9998888888876 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.0048
                 HTT-HHHHHHHHHHHHH CS
       TPR_8  13 klgdyeeAkeyyekale 29 
                  lg+++eA+++++++l+
  KHJ33497.1 212 HLGRLDEAEAALQQVLT 228
                 69************997 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.32   3.3e+02      10      24 ..     109     123 ..     103     124 .. 0.78
   2 ?    0.6   0.0       1.1   1.1e+03      14      30 ..     179     195 ..     164     198 .. 0.78
   3 ?    8.5   0.0    0.0032       3.3       6      29 ..     206     229 ..     201     232 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.32
                 HHHHHHHHHHHHHHH CS
       TPR_6  10 yrklgdtdkAleale 24 
                 +  +g+t++Al++le
  KHJ33497.1 109 LHLAGKTEEALALLE 123
                 45567*******998 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHHH- CS
       TPR_6  14 gdtdkAlealerlikeY 30 
                 +++++A   +e+l + +
  KHJ33497.1 179 DKYQQAFYVFEELAQAF 195
                 5899**99***999877 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0032
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealerlike 29 
                 +a s + lg+ d+A +al++++++
  KHJ33497.1 206 QAISEIHLGRLDEAEAALQQVLTK 229
                 788999999************987 PP

>> RuvX  Holliday junction resolvase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2     7e-05     0.074      16      85 ..      64     133 ..      63     151 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 7e-05
                 EEE-S--SS---EEEEE---HHHHHHHHHHHHHHTT--EEEEE------SSS---SSTTHHHHHHHHHT. CS
        RuvX  16 AvsdplgilaspletierkskekdleelkelvkeeeveeiVvGlPlnldgsegesakkvrkfaeeLakrl 85 
                 A ++p+ +  ++l  i+r++++++l+e+++l + + v+ ++vG  l+l g+++e+ +  ++   +L+   
  KHJ33497.1  64 AATQPEHVAIRALVEITRGNHTEALREIENLQTVKGVTIVLVGTVLHLAGKTEEALALLETHEGNLEAVA 133
                 77889999999********99*********************************9999998888887765 PP

>> TPR_21  Tetratricopeptide repeat-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.48   5.1e+02     120     140 ..     106     126 ..      84     133 .. 0.77
   2 ?    1.8   0.8      0.16   1.7e+02     110     143 ..     128     159 ..     112     167 .. 0.73
   3 ?   13.2   0.2   5.1e-05     0.054      57     122 ..     183     246 ..     174     266 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.48
      TPR_21 120 arvllaekkydeAlktLeakk 140
                   vl  ++k++eAl++Le+ +
  KHJ33497.1 106 GTVLHLAGKTEEALALLETHE 126
                 5688889999****9999765 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.16
      TPR_21 110 elkalarlRLarvllaekkydeAlktLeakkeea 143
                 +l+a+a   + ++ l+++ +d Alk+++a+k+ a
  KHJ33497.1 128 NLEAVAL--IVQIHLQQNRIDLALKEVSAAKKWA 159
                 4555553..57999999*******9999887755 PP

  == domain 3  score: 13.2 bits;  conditional E-value: 5.1e-05
      TPR_21  57 kakeaaeeladeyggtaYaalaaLllAkaaveagdlaaAkaqLewvlekakdeelkalarlRLarv 122
                 +a   +eela++++ t   ++    +A +++  g l++A+a+L++vl k kd +l+ + ++ L  +
  KHJ33497.1 183 QAFYVFEELAQAFSTT--SSQNLVSQAISEIHLGRLDEAEAALQQVLTKDKDYKLAIVNNIVLSTI 246
                 5666789999999999..6666678999***************************99999988776 PP

>> DUF4423  Domain of unknown function (DUF4423)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.85   8.9e+02     100     141 ..      24      65 ..      15      68 .. 0.84
   2 ?    2.0   0.0      0.14   1.5e+02      14      40 ..      61      86 ..      47      98 .. 0.77
   3 ?    8.7   0.1    0.0012       1.3      82     140 ..     196     260 ..     189     278 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.85
     DUF4423 100 qmlelAiealervpkeeRdissltlaiskedyekikkeiref 141
                 ++le  iea+++++k   ++  l   i   ++e++ +e++++
  KHJ33497.1  24 KVLETNIEAMKEDNKIASHVLILRAKIAMGEFEEVFEEVKAA 65 
                 678889999999999999999999999999999999888876 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.14
     DUF4423 14 efeyfssWyypvirellplkdfkadpe 40
                e++   ++ +++ir+l+++  ++  +e
  KHJ33497.1 61 EVKAATQPEHVAIRALVEITRGN-HTE 86
                556667899**********9993.333 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.0012
     DUF4423  82 slttssevkseavrsyhkqmlelAiealervpkeeRdissltl......aiskedyekikkeire 140
                 s+t+s++  s+a++++h   l++A  al++v +++ d++  ++      +is ++ +++++e+++
  KHJ33497.1 196 STTSSQNLVSQAISEIHLGRLDEAEAALQQVLTKDKDYKLAIVnnivlsTISGKNVDQLVDELEA 260
                 5678999******************************9876542222225666666666666665 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.4   2.5e+03       6      12 ..      18      24 ..      17      28 .. 0.78
   2 ?   -3.5   0.0       8.7   9.2e+03       7      15 ..      81      89 ..      79      90 .. 0.83
   3 ?    1.5   0.0      0.22   2.4e+02       2      17 ..     107     122 ..     106     124 .. 0.80
   4 ?   -1.2   0.0       1.6   1.7e+03       3      16 ..     138     151 ..     137     155 .. 0.85
   5 ?    5.5   0.1     0.013        14       7      27 ..     213     233 ..     210     236 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.4
      TPR_11  6 eqGkyee 12
                 qG+ye+
  KHJ33497.1 18 HQGQYEK 24
                5999997 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 8.7
      TPR_11  7 qGkyeeAie 15
                +G+ +eA+ 
  KHJ33497.1 81 RGNHTEALR 89
                799999985 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.22
      TPR_11   2 dayyeqGkyeeAieaY 17 
                  +++  Gk eeA++ +
  KHJ33497.1 107 TVLHLAGKTEEALALL 122
                 577889*******976 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 1.6
      TPR_11   3 ayyeqGkyeeAiea 16 
                 +  +q++++ A+++
  KHJ33497.1 138 IHLQQNRIDLALKE 151
                 6789*****99985 PP

  == domain 5  score: 5.5 bits;  conditional E-value: 0.013
      TPR_11   7 qGkyeeAieaYkkAlkldPdn 27 
                 +G+++eA +a+++ l  d d+
  KHJ33497.1 213 LGRLDEAEAALQQVLTKDKDY 233
                 7***************99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       883  (0.0492498); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2078.37
//
Query:       KHJ33498.1  [L=1141]
Description: putative meiotically up-regulated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-24   86.1   0.0    4.5e-12   46.2   0.0    2.5  2  C2        C2 domain
  ------ inclusion threshold ------
       0.13   12.3   0.0       0.36   10.9   0.0    1.7  1  DUF2111   Uncharacterized protein conserved in archaea (DUF21


Domain annotation for each model (and alignments):
>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.2   0.0     5e-16   4.5e-12       4      94 ..     460     559 ..     457     568 .. 0.87
   2 !   37.5   0.0   2.6e-13   2.3e-09       6     103 .]     650     774 ..     645     774 .. 0.76

  Alignments for each domain:
  == domain 1  score: 46.2 bits;  conditional E-value: 5e-16
                 EEEEEEEESSSSSSTTSS....CEEEEEEEE..ECEEEEEE-SCSSSSSSEEEEEEEEEESC...HTTSEEEEEEEEECSSSTEEEEEEEEEEGHH.HH CS
          C2   4 evtvieAknLpnkdkkgs....sdpyvkvsl..dgkqkakTrviknslnPvWnekftfevae...leeakLeveVfdndrlskddfiGkveiplst.ll 92 
                  + +++  +L n+d  gs    +d+y+++s+   gk ++ Trvi++ lnP+W+e++ + +++   + +++L + ++d dr + dd iG+ve++l++ + 
  KHJ33498.1 460 WIIIHKVFGLSNQDRRGSdrggPDSYITISFskYGKPMYSTRVIQDDLNPIWEESCPLLINPaliKVDEQLSIDLWDCDRSTPDDQIGRVELSLQKmI- 557
                 5678888899999885555555**********99*************************************************************943. PP

                 TT CS
          C2  93 sg 94 
                 ++
  KHJ33498.1 558 KN 559
                 33 PP

  == domain 2  score: 37.5 bits;  conditional E-value: 2.6e-13
                 EEEEEESSSSSSTTSS..........................CEEEEEEEEECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTE CS
          C2   6 tvieAknLpnkdkkgs..........................sdpyvkvsldgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskd 78 
                  v++  nL+ ++++gs                           ++y+++ ++++ +++Tr+++ s +P++n +    +++ ++a +++ V d++  ++d
  KHJ33498.1 650 IVHKIVNLELQKINGSsgkrkdrdyepalksgdmeqeehknlASSYCTILINDELVYRTRTKNESSKPIFNTSTDRFIRDWHSAIITIVVRDQRIREHD 748
                 5566666655544333333444444444444445555555559*****************9988889****999999999999*********9997777 PP

                 EEEEEEEEEGHH.HHTTHHHHEEEEH CS
          C2  79 dfiGkveiplst.llsgeeaegwypl 103
                  ++G+v++++s+ l++ ++ ++wypl
  KHJ33498.1 749 PILGVVSLKVSDlLQNCSQVTRWYPL 774
                 7***********88888999****97 PP

>> DUF2111  Uncharacterized protein conserved in archaea (DUF2111)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0     4e-05      0.36      24      69 ..      15      60 ..       2      65 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 4e-05
     DUF2111 24 kgkvvdedYtgpvLeevleegkvikkvpkeGaYkGvpvvvaPikek 69
                k++ ++++ +  +L+e  ++g+   kvp++G Yk +++v+ P++ +
  KHJ33498.1 15 KNSTLNDSQSLDILDESRRKGEKKSKVPAKGLYKSKRIVIDPVTGD 60
                5667777788889******************************874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.73u 0.27s 00:00:01.00 Elapsed: 00:00:00.43
# Mc/sec: 8050.93
//
Query:       KHJ33499.1  [L=303]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       839  (0.0467957); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2285.75
//
Query:       KHJ33500.1  [L=119]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.26s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 940.57
//
Query:       KHJ33501.1  [L=414]
Description: putative c4-dicarboxylate transporter malic acid transport protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-76  257.6  43.9    1.9e-76  257.4  43.9    1.0  1  SLAC1        Voltage-dependent anion channel
  ------ inclusion threshold ------
        4.6    7.3   9.7         30    4.7   4.1    2.9  2  SH           Viral small hydrophobic protein
        7.3    5.3  20.1       0.39    9.5   3.5    3.2  3  LptF_LptG    Lipopolysaccharide export system permease LptF/L


Domain annotation for each model (and alignments):
>> SLAC1  Voltage-dependent anion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.4  43.9   3.1e-80   1.9e-76       1     323 [.      52     395 ..      52     396 .. 0.93

  Alignments for each domain:
  == domain 1  score: 257.4 bits;  conditional E-value: 3.1e-80
       SLAC1   1 hftpawFaivMGtgilalllkalp.a.rglriislilfllalvlfllllvlyllrfilypeavrkelrhpveslflgtfpmglltilnglll..vl.pg 94 
                 hft+aw+a++M+tg++a  l+ lp + +gl+ i+ ++f+l+++lf++++ l+++rf+++++++r+ + +p+e++f +tf+++l+t++++     v+ +g
  KHJ33501.1  52 HFTFAWYASTMSTGGIAFTLSVLPnRfPGLDEIGAAIFILNIFLFFIITGLMIARFVIFKGTFRHAFINPHEGFFSATFWLTLATMMSNSTVygVPhAG 150
                 8*******************65898459*******************************************************9998444333588777 PP

       SLAC1  95 ewlatlalvllWigvllslltavvvvfllftekeekleeitpawllpvvgllvvallgallaesqnpslqllgilvvslllwglGlllalvlfvlylyr 193
                 +wl+t++++++W +++l  + +++ + +lft+++  l ++ p w+lp++++++v++l++++a+ q+ +++l  ilv++l ++glG+++a+++++ly+ r
  KHJ33501.1 151 PWLVTALRYGFWAYTVLVTAHSIIYYNILFTNHKLVLTNVLPGWVLPIFPPMLVGTLASAIARLQEAEDALP-ILVAGLSYQGLGMMIAMFMYSLYFGR 248
                 ********************************9889*************************88888888887.************************** PP

       SLAC1 194 lithklppaelrptlfiplGplgqgalallllgkaapk.................aaevlkvlalllalflwglglfwllvavlsvls.lpvrlkfsls 274
                 l+t++lp+ + rp +fi++Gp+++++la++++++ +++                 +  +l +lal++++flw l+++++ +a+l++++ lp r +f+l 
  KHJ33501.1 249 LLTSGLPADMSRPAMFIAVGPPAFTSLAFIGMAQCVTQaeifetdiglegvdsalIEPMLLLLALIVSIFLWVLSFWFFSIALLATIEaLP-RNDFHLN 346
                 ************************************77689988888888887777777799**************************444.******* PP

       SLAC1 275 wWaftFPlgalalatielgkaleseafkvlgtillvllvlvwllvlvgt 323
                 w a++FP++++++ati++g+ l+s+++ ++gt+++++l+ +wll++ ++
  KHJ33501.1 347 WYAYVFPNVGFTIATIKIGQRLNSPGIVGVGTGMTAVLFGLWLLIVTCH 395
                 ********************************************99876 PP

>> SH  Viral small hydrophobic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.3    0.0058        35      12      43 ..      89     119 ..      84     130 .. 0.81
   2 ?    4.7   4.1    0.0051        30      14      32 ..     307     325 ..     304     335 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0058
          SH  12 flllillsliitlyvwiistityktavrhaal 43 
                 f+l i+l +iit  + i   + +k + rha +
  KHJ33501.1  89 FILNIFLFFIITG-LMIARFVIFKGTFRHAFI 119
                 8999999999996.458888999999999965 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0051
          SH  14 llillsliitlyvwiisti 32 
                 +l+ll+li+++++w++s  
  KHJ33501.1 307 MLLLLALIVSIFLWVLSFW 325
                 6899***********9965 PP

>> LptF_LptG  Lipopolysaccharide export system permease LptF/LptG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.1     0.019   1.2e+02     270     326 ..      47     105 ..       3     135 .. 0.58
   2 ?    9.5   3.5   6.4e-05      0.39     293     351 ..     153     211 ..     143     214 .. 0.91
   3 ?    2.8   4.3    0.0074        44     305     349 ..     309     362 ..     301     367 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.019
   LptF_LptG 270 aelhkrlalplaclvfal..iaaplglvkrrggrglrlliaillfvlyyvllslgkala 326
                  e  k +++++++  +    ia+ l++ ++r  +  ++  ai+++ ++++++++g  +a
  KHJ33501.1  47 KERLKHFTFAWYASTMSTggIAFTLSVLPNRFPGLDEIGAAIFILNIFLFFIITGLMIA 105
                 45566677777776666622444445555555554445555555555555555544443 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 6.4e-05
   LptF_LptG 293 glvkrrggrglrlliaillfvlyyvllslgkalaengvlppilaawlpnilflllglfl 351
                  ++  r+g+++  +++ +  ++yy +l++  +l   +vlp ++  ++p++l+  l++++
  KHJ33501.1 153 LVTALRYGFWAYTVLVTAHSIIYYNILFTNHKLVLTNVLPGWVLPIFPPMLVGTLASAI 211
                 56778***********************************************9999876 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.0074
   LptF_LptG 305 lliaillfvlyyvllslgkalaengvlpp.........ilaawlpnilflllgl 349
                 ll+a+++ ++ +vl++ ++++a   ++++         + a+ +pn+ f ++ +
  KHJ33501.1 309 LLLALIVSIFLWVLSFWFFSIALLATIEAlprndfhlnWYAYVFPNVGFTIATI 362
                 899999999999999999999999888888888888889999999999988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       949  (0.052931); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.37
# Mc/sec: 3354.01
//
Query:       KHJ33502.1  [L=507]
Description: hypothetical protein EV44_g3351 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.059   13.7   0.0       0.31   11.4   0.0    2.2  2  Ntox1     Putative RNase-like toxin, toxin_1


Domain annotation for each model (and alignments):
>> Ntox1  Putative RNase-like toxin, toxin_1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0      0.54   9.6e+03      28      40 ..      14      26 ..      11      30 .. 0.74
   2 ?   11.4   0.0   1.7e-05      0.31      15      54 ..      57      96 ..      52     106 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.54
       Ntox1 28 CsppPCPvlrveY 40
                 s   CP++ +  
  KHJ33502.1 14 HSYRACPNISLTI 26
                56778****9865 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 1.7e-05
       Ntox1 15 ghdvvvtpdGvekCsppPCPvlrveYkkelaaddelkeen 54
                 h+    ++ +e+  +pPCP   +    e++ dd++ ++ 
  KHJ33502.1 57 AHHQRNQDEMLERSYGPPCPMTPIYRSMEVNKDDDFENWP 96
                6888999999**************999**********994 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       796  (0.0443973); expected 358.6 (0.02)
Passed bias filter:                      564  (0.0314574); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3424.72
//
Query:       KHJ33503.1  [L=1192]
Description: putative dna excision repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-34  118.8   0.0      3e-34  117.5   0.0    1.8  1  XPG_N           XPG N-terminal domain
    2.8e-26   91.7   0.0    1.1e-25   89.8   0.0    2.2  1  XPG_I           XPG I-region
    9.9e-05   22.9   0.3      0.004   17.7   0.0    3.3  3  5_3_exonuc      5'-3' exonuclease, C-terminal SAM fold
     0.0069   17.0   0.1      0.025   15.2   0.0    1.9  2  HHH_5           Helix-hairpin-helix domain
  ------ inclusion threshold ------
      0.077   13.3   0.0       0.19   12.0   0.0    1.6  1  Transposase_20  Transposase IS116/IS110/IS902 family


Domain annotation for each model (and alignments):
>> XPG_N  XPG N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.5   0.0   8.3e-38     3e-34       1      99 [.       1      96 [.       1      98 [. 0.99

  Alignments for each domain:
  == domain 1  score: 117.5 bits;  conditional E-value: 8.3e-38
                X--TTHHHHHHHH-GEEEEEGGGGTTEEEEEEHHHHHHHHHHHSE.ETTEE-BS-HHHHHHHHHHHHHHHTTEEEEEEE--S--GGGHHHHHHHHHHHH CS
       XPG_N  1 MGikgLlkllkevaairsvsiealegkklaiDaslwlyrfliavreqlgnalentshlmglfsrllrlldfgikPifVFdgkapdlkkeelekrserrq 99
                MG+ gL+++l+++a  r+  + +l+ k+la+Das+w+y+fl+avr+++gnal n sh++g+f+r+++ll+fgikP+fVFdg+ap lk+++++ r++rr+
  KHJ33503.1  1 MGVTGLWPILEPSA--RPTPLPTLNRKRLAVDASIWIYQFLKAVRDKEGNALPN-SHIVGFFRRICKLLYFGIKPVFVFDGGAPVLKRQTIQSRRQRRE 96
                **************..**************************************.******************************************97 PP

>> XPG_I  XPG I-region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.8   0.0   3.1e-29   1.1e-25       2      94 .]     891     974 ..     890     974 .. 0.96

  Alignments for each domain:
  == domain 1  score: 89.8 bits;  conditional E-value: 3.1e-29
                 HHT--EEE-SS-HHHHHHHHHHTTSSSEEE-SSSHHHHTT-SEEEESTT.ECECTT..EEECEEEEEEHHHHHHHHT--HHHHHHHHHHHCET CS
       XPG_I   2 lmgipyvvApgEAEAqcayLqkkglvdaviseDsDlllFGapkvlrnlskkkskkkkekekkkvevidlekvlkelgltreqlidlaillgcD 94 
                  +gipy++Ap+EAEAqca+L++  lvd+v+++D D++lFG+++v++n++  +s+k        ve++   +++kel+l+re+li +a llg+D
  KHJ33503.1 891 FFGIPYITAPMEAEAQCAELVRLSLVDGVVTDDCDIFLFGGTRVYKNMF--NSNKY-------VECYLATDIEKELSLSRENLISMAHLLGSD 974
                 59**********************************************9..66665.......****************************99 PP

>> 5_3_exonuc  5'-3' exonuclease, C-terminal SAM fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.4       2.3   8.1e+03      41      76 ..     121     156 ..     102     174 .. 0.61
   2 ?    0.5   0.0      0.27   9.8e+02      54      91 ..     736     773 ..     714     777 .. 0.79
   3 !   17.7   0.0   1.1e-06     0.004       8      64 ..     966    1026 ..     960    1033 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2.3
  5_3_exonuc  41 leeilenldelkekklkekLeenkeearl..skkLati 76 
                  ee+ +   +++++k+  +Lee++e+  +   k+L+ +
  KHJ33503.1 121 EEELRK--RKIERNKRGLTLEEDEEQETFatDKELVYV 156
                 334444..356667788888888777554225666655 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.27
  5_3_exonuc  54 kklkekLeenkeearlskkLatiktdvpleleledlkl 91 
                  +l ++L enk++a    + ++i+tdv  e+ l++l+ 
  KHJ33503.1 736 TALTDNLIENKKSASPEFEEVQIQTDVITEIGLASLSR 773
                 468899********************999998887765 PP

  == domain 3  score: 17.7 bits;  conditional E-value: 1.1e-06
  5_3_exonuc    8 dlkaLvGDssDnipGvpgiGektAakLlkeygsleeilenl...d...elkekklkekLeenk 64  
                   ++ L G  sD  +G pgiG+ tA ++++e+ s+ +  +     +   ++++++ ++k+++n+
  KHJ33503.1  966 SMAHLLG--SDYTEGLPGIGPVTALEIISEFSSISDFAAWWrtaQystDIEQSNFRKKFRRNQ 1026
                  5556666..8999**********************9999552221223466677888888766 PP

>> HHH_5  Helix-hairpin-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1       3.9   1.4e+04      24      36 ..     390     402 ..     386     406 .. 0.76
   2 !   15.2   0.0   6.9e-06     0.025       6      31 ..     978    1002 ..     973    1012 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 3.9
                 -SHHHHHHS-HHH CS
       HHH_5  24 esvedlaaadvee 36 
                 ++++ +a++d+ e
  KHJ33503.1 390 DTLDSIASEDKTE 402
                 6999****99744 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 6.9e-06
                  TSTT--HHHHHHHHTTT--SHHHHHH CS
       HHH_5    6 svsGiGpktAlallsaGiesvedlaa 31  
                  +++GiGp+tAl ++s  ++s+ d+aa
  KHJ33503.1  978 GLPGIGPVTALEIISE-FSSISDFAA 1002
                  79**************.******986 PP

>> Transposase_20  Transposase IS116/IS110/IS902 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   5.4e-05      0.19       6      31 ..     978    1003 ..     974    1010 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 5.4e-05
  Transposase_20    6 sipGiGpvtaaallaeigdlrrfksa 31  
                       +pGiGpvta+++++e   ++ f  +
      KHJ33503.1  978 GLPGIGPVTALEIISEFSSISDFAAW 1003
                      68***************999999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1241  (0.0692175); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.78u 0.27s 00:00:01.05 Elapsed: 00:00:00.43
# Mc/sec: 8247.67
//
Query:       KHJ33504.1  [L=922]
Description: putative u3 snornp wd40 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.4e-07   30.5   0.1      0.022   15.0   0.0    5.8  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    6.2e-05   23.7  12.3         21    6.2   0.0    7.9  8  WD40         WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.21   1.9e+03      53      79 ..      37      63 ..      35      78 .. 0.69
   2 ?    0.1   0.0      0.11   9.9e+02      51      70 ..     144     163 ..     140     172 .. 0.85
   3 !   15.0   0.0   2.5e-06     0.022      27      81 ..     168     220 ..     147     279 .. 0.87
   4 ?    2.1   0.0     0.026   2.4e+02      42      70 ..     473     501 ..     465     515 .. 0.84
   5 ?    3.4   0.0      0.01        93      21      63 ..     517     559 ..     507     566 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.21
  ANAPC4_WD40 53 Lavaysdgevrlldaesgkvvhslsvk 79
                 La++ ++g +++ +  +g   ++  ++
   KHJ33504.1 37 LAIGRANGDIEIWNPLKGSWFQETVIH 63
                 899999999999998888777665554 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.11
  ANAPC4_WD40  51 klLavaysdgevrlldaesg 70 
                  + La ++ dg++ l++ ++ 
   KHJ33504.1 144 QSLAAGCTDGALVLYSTQDD 163
                  679************98876 PP

  == domain 3  score: 15.0 bits;  conditional E-value: 2.5e-06
  ANAPC4_WD40  27 qrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  q++     ++++ ++ s+ +++  ++ a ++ d+++r++d  +gk+++ +s +s 
   KHJ33504.1 168 QKLLVR-PSSKKAKIISITYQN-RNIVAAGCTDSTIRICDTRNGKLIRVMSLGSG 220
                  555444.678899999999986.5799********************99988776 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.026
  ANAPC4_WD40  42 rsLaWkpdgklLavaysdgevrlldaesg 70 
                  r L+ +p+gk L+v   ++++ l    + 
   KHJ33504.1 473 RLLKISPNGKWLCVIQPENQILLARLAQS 501
                  668999**************998776665 PP

  == domain 5  score: 3.4 bits;  conditional E-value: 0.01
  ANAPC4_WD40  21 vfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevr 63 
                  + R n + v ++   + ++ +++La++  +++L+v+   g v 
   KHJ33504.1 517 IDRQNDKLVSSGGLGSYSRVITQLAFSAHNRILVVSDLSGYVD 559
                  56778888888888888999***************99888875 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0     0.093   8.3e+02      13      38 .]      16      50 ..      10      50 .. 0.73
   2 !    5.4   0.0    0.0041        37       2      37 ..     112     158 ..     111     159 .. 0.80
   3 ?    4.0   0.0     0.011     1e+02      21      36 ..     188     203 ..     176     205 .. 0.82
   4 !    5.1   0.1    0.0052        47      11      38 .]     226     254 ..     211     254 .. 0.81
   5 !    6.2   0.0    0.0023        21       5      33 ..     263     291 ..     256     296 .. 0.81
   6 ?   -2.6   1.4       1.4   1.2e+04      13      13 ..     346     346 ..     311     387 .. 0.52
   7 ?   -0.1   0.0      0.23     2e+03      17      26 ..     476     485 ..     466     486 .. 0.88
   8 ?    0.7   0.0      0.12   1.1e+03      12      28 ..     535     552 ..     523     563 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.093
                EEEEEEETTSSE.........EEEEETTSEEEEEE CS
        WD40 13 vtslafspdgaw.........lasGsdDgtvriWd 38
                +++l fs+++           la G  +g + iW+
  KHJ33504.1 16 INALEFSHSHLKrhkltaplrLAIGRANGDIEIWN 50
                666666666555667667767788978*******8 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0041
                 EEEEEEESS.SSEEEEE..........EETTSSEEEEEETTSEEEEE CS
        WD40   2 qclrtltGH.ssvtsla..........fspdgawlasGsdDgtvriW 37 
                 q+lr  +G  + ++++a           +++++ la+G+ Dg + ++
  KHJ33504.1 112 QPLRQASGNhGEIWCFAaqpvsldhnaGQDYSQSLAAGCTDGALVLY 158
                 677777777577**999999999988877777779***99**99887 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.011
                 TSSEEEEEETTSEEEE CS
        WD40  21 dgawlasGsdDgtvri 36 
                 + + +a+G+ D t+ri
  KHJ33504.1 188 NRNIVAAGCTDSTIRI 203
                 5567999*99*****9 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.0052
                 SS..EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  11 ss..vtslafspdgawlasGsdDgtvriWd 38 
                 ++  v++++  +dg+ + sG+  g ++iWd
  KHJ33504.1 226 KDiiVWAIKALRDGTII-SGDSTGELKIWD 254
                 556579999999***97.7*66*******9 PP

  == domain 5  score: 6.2 bits;  conditional E-value: 0.0023
                 EEEESS.SSEEEEEEETTSSEEEEEETTSE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgt 33 
                 r+l +H ++v +l ++ dg+ ++sG++D+ 
  KHJ33504.1 263 RIL-AHkQDVLCLTTNLDGSAIFSGGMDRR 291
                 444.8*888*****9999999*****9*96 PP

  == domain 6  score: -2.6 bits;  conditional E-value: 1.4
                 E CS
        WD40  13 v 13 
                 +
  KHJ33504.1 346 I 346
                 1 PP

  == domain 7  score: -0.1 bits;  conditional E-value: 0.23
                 EEETTSSEEE CS
        WD40  17 afspdgawla 26 
                 + sp+g+wl+
  KHJ33504.1 476 KISPNGKWLC 485
                 68******95 PP

  == domain 8  score: 0.7 bits;  conditional E-value: 0.12
                 S.EEEEEEETTSSEEEEE CS
        WD40  12 s.vtslafspdgawlasG 28 
                   +t lafs +++ l+ +
  KHJ33504.1 535 RvITQLAFSAHNRILVVS 552
                 347999999999998743 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (922 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       381  (0.0212505); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 6421.19
//
Query:       KHJ33505.1  [L=192]
Description: putative f-box domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-07   31.3   1.3    3.2e-07   30.1   1.3    1.6  1  F-box-like  F-box-like
    1.9e-05   24.4   1.1    1.9e-05   24.4   1.1    1.8  2  F-box       F-box domain
     0.0055   16.6   0.2     0.0097   15.8   0.2    1.4  1  F-box_4     F-box
  ------ inclusion threshold ------
      0.018   14.8   3.0      0.047   13.4   3.0    1.8  1  RPEL        RPEL repeat


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   1.3   7.1e-11   3.2e-07       2      41 ..      22      60 ..      21      66 .. 0.92

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 7.1e-11
  F-box-like  2 srLPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplL 41
                ++LP E+L +I+syL+  dLl+++++  + r++ ld+ lL
  KHJ33505.1 22 PSLPSELLFHILSYLDIPDLLSISRTMHYLRTISLDP-LL 60
                89********************************998.76 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   1.1   4.3e-09   1.9e-05       3      29 ..      21      47 ..      19      64 .. 0.90
   2 ?   -3.5   0.1       2.4   1.1e+04      34      42 ..     177     185 ..     176     188 .. 0.70

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 4.3e-09
                HHHS-HHHHHHHHHTS-HHHHHHHCTT CS
       F-box  3 lsrLPsevlrhILerLplsdllalrrV 29
                l +LPse+l hIL++L+  dll+++r+
  KHJ33505.1 21 LPSLPSELLFHILSYLDIPDLLSISRT 47
                679*********************997 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.4
                 HHHHTTHHH CS
       F-box  34 rilidsdrl 42 
                 r++ids r 
  KHJ33505.1 177 RRMIDSSRS 185
                 778888775 PP

>> F-box_4  F-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.2   2.2e-06    0.0097       4      40 ..      20      56 ..      17      66 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 2.2e-06
     F-box_4  4 sLssLPlevlqhiaslLDsfsLsqLslvskllrevcs 40
                 L sLP e+l hi+s+LD   L+++s++ + lr ++ 
  KHJ33505.1 20 FLPSLPSELLFHILSYLDIPDLLSISRTMHYLRTISL 56
                5889*****************************9975 PP

>> RPEL  RPEL repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   3.0     1e-05     0.047       1      23 [.     110     132 ..     110     133 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1e-05
        RPEL   1 sLerKLshRPtreELvernILpe 23 
                 +L+r L++RPt+e L+e ++Lp+
  KHJ33505.1 110 RLKRQLERRPTVERLIELGVLPP 132
                 59*******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1398.97
//
Query:       KHJ33506.1  [L=958]
Description: putative coatomer subunit beta [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-97  326.9  11.3      2e-97  326.9  11.3    1.5  2  Adaptin_N        Adaptin N terminal region
    3.8e-59  198.6   2.0    8.6e-59  197.5   2.0    1.6  1  Coatamer_beta_C  Coatomer beta C-terminal region
    6.4e-57  191.1   0.1    1.6e-56  189.7   0.1    1.7  1  Coatomer_b_Cpla  Coatomer beta subunit appendage platform
    8.3e-12   45.4   5.7    3.9e-10   40.0   0.1    2.8  2  Cnd1             non-SMC mitotic condensation complex subunit
      4e-10   40.0   0.1     0.0081   16.5   0.0    4.9  4  HEAT_2           HEAT repeats
    2.9e-05   24.2   0.0     0.0001   22.4   0.0    2.0  2  Coatomer_g_Cpla  Coatomer subunit gamma-1 C-terminal appendag
    0.00026   21.0   0.1        2.5    8.6   0.0    4.8  4  HEAT             HEAT repeat
  ------ inclusion threshold ------
       0.02   15.3   0.2      0.074   13.4   0.2    2.0  1  AP4E_app_platf   Adaptin AP4 complex epsilon appendage platfo


Domain annotation for each model (and alignments):
>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  326.9  11.3  8.9e-101     2e-97       6     475 ..      23     493 ..      20     519 .. 0.95
   2 ?   -3.2   0.0      0.99   2.2e+03     251     312 ..     630     690 ..     619     736 .. 0.56

  Alignments for each domain:
  == domain 1  score: 326.9 bits;  conditional E-value: 8.9e-101
                 CHHHHHHCCSSS-SCHHHHHHHHHHHHHHHCT---GHHHHHHHCCCC.SS-CHHHHHHHHHHHHHCTTSCC.....HHCCCCHHHHHHCCSSSHHHHHH CS
   Adaptin_N   6 qqelaeilnsnkdddekkkeavkkliylialGedvsflffevvklva.skdfelKrlvYlylellaeesed.....lalLvtnslqkDlkdpnqlirgl 98 
                  qel+++l++    de k e++++++ ++++G++++ l+++++++v+ sk   lK+l+Y+y e++++++++     +++Lv+n +++Dl++pn++irg+
  KHJ33506.1  23 LQELRTALEKG--TDENKVETMRRILTIMLNGDSMPQLLMHIIRFVMpSKHKNLKKLLYFYYEICPKTDSNgklkqEMILVCNGIRNDLQHPNEYIRGN 119
                 589999*****..************************************************************************************** PP

                 HHHHHCCC--CCCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCT..T-SSHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC CS
   Adaptin_N  99 ALrvLssirvpelaedlapaikkllkdrspyvrkkAalailklykkdpdllrkqlveeikell..sdkdpgvvlaAvalleeikkndrlllkllpklvr 195
                 +Lr+L+++r+pel e l+   +++l++r+ yvrk+A+ ai+ +y+ +++l+++  ++e++  +  +++d+ ++++A+a+l +i +++++    l++l++
  KHJ33506.1 120 TLRFLCKLREPELIEPLLSSARSCLEHRHVYVRKNAVFAIASIYQHSESLIPD--APELIYTFleTESDTTCKRNAFAALLSI-CHEKA----LEYLTT 211
                 ***************************************************99..68888777688889**************.88888....9***** PP

                 CHHHHHHCS-HHHHHHHHHHHCC---SSHHHH..HHHHHHHCGGCGCSSCHHHHHHHHHCCHCCCCSTHHHCCHHCHHHHHH.SSCCTCHHHHHCHHHH CS
   Adaptin_N 196 rLcnllteldpwlqvkiiklltrlarqepeerskkellesllnllqssnnaVlletvnlivelapknelivlavnaLvrlls.skdenlryvaLrtllk 293
                  L+ + ++ d++lq++ ++++++ a+q+ + +   ++l+ +  ll+s +++V++e++  ++ + +++ ++++a++++++l+  + d+n+++++L++  +
  KHJ33506.1 212 VLDGI-SNADELLQLVELEFIRKDAAQNSQNK--TRYLRIIFDLLESNATTVVYEAASSLTAITSNPVAVKAAASKFIELCIkEADNNVKLIVLDRVDT 307
                 *9966.**************************..78*********************************************9999************** PP

                 HHHHXXTTTTTTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHHHHHHHHHHTTSSXXHH......HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHH CS
   Adaptin_N 294 ivkkepkavqhldlkifllktdddvsirlkaldlllklvdesNvkeivkeLkkyvkevaded......fksklvkaIgrlaekfatdaewvldvllell 386
                 +  +++  +  l ++i ++ +++d ++r+kald+ l++v+++Nv+e+v  Lkk+++++ d+d      +++ l++aI+++a+kf ++a++v+  l+e++
  KHJ33506.1 308 LRRNNEGILDGLIMEILRVLSSPDLDVRKKALDITLEMVSSKNVEEVVLLLKKELSKTVDQDfekndeYRQLLIYAIHQCAIKFSEVAASVVGLLMEFI 406
                 *****55555*********************************************888899999999******************************** PP

                 TTXXHHHHHHHHHHHHHHHHHSTTTSTTCHHHHCCTCCGXXSHHHHHHHHHHHHHTTTTXTT....HHHHHHCTTTTTTTSXHHHHHHHH CS
   Adaptin_N 387 slsgesvkdeivevirdliqkvpelheeiiekLaellekieseearaaaiWllGeygelvsnte.sasdllrslaekfvlesekvklqil 475
                  + ++s + +++++i+++++k+p+l+ +i+e+L+++l++++  +++++a+W++Gey+ ++s+++  ++++  sl e ++l+se+    +l
  KHJ33506.1 407 VDLNNSSAIDVISFIKEVVEKFPNLRPSIVERLVATLSEVRAGKVYRGALWIVGEYSLEASDIRdAWKKIRISLGEIPILASEQR---LL 493
                 ****************************************************************9***************99953...44 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.99
                 HHHHCCHCCCCSTHHHCCHHCHHHHHHSSCCTCHHHHHCHHHHHHHHX.....XTTTT.TTTCCCCSX CS
   Adaptin_N 251 tvnlivelapknelivlavnaLvrllsskdenlryvaLrtllkivkke.....pkavq.hldlkifll 312
                 +v+ + el +++el +        +l + +e+ r ++    +k++ ke     ++avq ++ l+i+ l
  KHJ33506.1 630 CVKILAELGQNQEL-E------AAFLADTREAFRTIVQAEENKLAAKEasekaKTAVQvDDVLQIRQL 690
                 44444444444442.1......2344444444444444444444444444444455555555555555 PP

>> Coatamer_beta_C  Coatomer beta C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.5   2.0   3.8e-62   8.6e-59       1     139 [.     681     816 ..     681     817 .. 0.96

  Alignments for each domain:
  == domain 1  score: 197.5 bits;  conditional E-value: 3.8e-62
  Coatamer_beta_C   1 vddlisfrqlkekkelseeeeedlveedlsqatgakkkeeefasklkkvvqLtGfsDpvYaEayvkvnqfDivLdvlivNqtketLqnltvela 94 
                      vdd++++rql++k+ ++ +   ++++ dl++atg+++++e+++skl++vvqLtGfsDpvYaEayvkv+qfDivLdvl+vNqt+etLqnl+ve+a
       KHJ33506.1 681 VDDVLQIRQLSKKNVDDGT---NEIQLDLEKATGGDSTTEDLTSKLSRVVQLTGFSDPVYAEAYVKVHQFDIVLDVLLVNQTTETLQNLSVEFA 771
                      79*********98866555...459********************************************************************* PP

  Coatamer_beta_C  95 tlgdlklvekpqsvtlaphdfakikatvkvsstetGvifGnivYd 139
                      tlgdlk+ve+p++ +l+phdf+++++t+kvsst+tGvifGn+vYd
       KHJ33506.1 772 TLGDLKVVERPTTQNLGPHDFQNFQSTIKVSSTDTGVIFGNVVYD 816
                      ********************************************9 PP

>> Coatomer_b_Cpla  Coatomer beta subunit appendage platform
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.7   0.1   7.3e-60   1.6e-56       1     126 [.     822     947 ..     822     948 .. 0.99

  Alignments for each domain:
  == domain 1  score: 189.7 bits;  conditional E-value: 7.3e-60
  Coatomer_b_Cpla   1 drnvvilndikidimdyikpakiseeeFremWaefeWEnkiavktkltdlkeyleelvkktnmklltpeeeleeeaeflsanlyaksvfgedal 94 
                      ++nvvilnd+++dimdyi+pa+++e++Fr+mW+efeWEnk+++++k  +lk++le+l+++tnm++ltp+++++++++flsanlya+svfgedal
       KHJ33506.1 822 ENNVVILNDVHVDIMDYIQPATCTETQFRSMWTEFEWENKVNINSKAISLKDFLEQLMASTNMSCLTPKASMKGDCQFLSANLYARSVFGEDAL 915
                      6899****************************************************************************************** PP

  Coatomer_b_Cpla  95 anvsiekeeegkisgvvRiRsktqgialslgd 126
                      an+sie+ e+g+++g+vRiRs++qg+alslg+
       KHJ33506.1 916 ANLSIEQGEDGSVTGFVRIRSRSQGLALSLGS 947
                      ******************************96 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.0   0.1   1.7e-13   3.9e-10       2     106 ..     116     221 ..     115     267 .. 0.78
   2 !    6.2   1.5    0.0042       9.4      18     155 ..     315     453 ..     297     459 .. 0.75

  Alignments for each domain:
  == domain 1  score: 40.0 bits;  conditional E-value: 1.7e-13
        Cnd1   2 iRalairtlgcirvpnlveylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselakll.eDenprVvanalaalteiseksenaiynllpd 99 
                 iR++ +r l+ +r p+l+e+l++  r++L+ ++ yVRk+a++++a ++++      +  + +++ l ++++++   na aal  i +++  + ++ + d
  KHJ33506.1 116 IRGNTLRFLCKLREPELIEPLLSSARSCLEHRHVYVRKNAVFAIASIYQHSESLIPDAPELIYTFLeTESDTTCKRNAFAALLSICHEKALEYLTTVLD 214
                 9**********************************************9999888888889999999889999**************9986677766666 PP

        Cnd1 100 iisklsd 106
                  is+  +
  KHJ33506.1 215 GISNADE 221
                 6666554 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0042
        Cnd1  18 lveylvepLrkrLkDedpyVRktaaivvakLilndmvkekg..flselakll.eD..enprVvanalaalteiseksenaiynllpdiisklsdalnec 111
                 +++ l+ ++ + L+ +d  VRk a+ + +++++ + v+e    + +el k + +D  +n++ +++ ++a+++++ k    + ++  +++  l + + ++
  KHJ33506.1 315 ILDGLIMEILRVLSSPDLDVRKKALDITLEMVSSKNVEEVVllLKKELSKTVdQDfeKNDEYRQLLIYAIHQCAIK----FSEVAASVVGLLMEFIVDL 409
                 6788888899999999999999999999999888888777754556777777422224566666666666666666....3444455555555555578 PP

        Cnd1 112 sewgqitilefLlsyipkdkqeaeslveklcprlqhansavvla 155
                 ++ + i +++f+ + ++k  +   s+ve+l++ l+ ++  +v +
  KHJ33506.1 410 NNSSAIDVISFIKEVVEKFPNLRPSIVERLVATLSEVRAGKVYR 453
                 899999999999999999999999*********99998888765 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   1.6e-05     0.036       8      59 ..     109     163 ..     104     171 .. 0.81
   2 !   16.5   0.0   3.6e-06    0.0081       8      72 ..     144     214 ..     141     220 .. 0.81
   3 !    9.3   0.0   0.00066       1.5      28      80 ..     241     298 ..     219     303 .. 0.82
   4 ?    3.0   0.0     0.061   1.4e+02      11      54 ..     292     341 ..     284     369 .. 0.63

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.6e-05
      HEAT_2   8 lendpdpevrraairaLgrignpealpaLvell....ededpavRraaaeaLgaig 59 
                 l ++p++++r +++r L ++++pe+++ L++ +    e+ + +vR++a+ a++ i 
  KHJ33506.1 109 L-QHPNEYIRGNTLRFLCKLREPELIEPLLSSArsclEHRHVYVRKNAVFAIASIY 163
                 5.79*********************999998884323456689*******999875 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 3.6e-06
      HEAT_2   8 lendpdpevrraairaLg..rignp....ealpaLvell.ededpavRraaaeaLgaigdpealpaLkelld 72 
                 l ++ + +vr++a+ a++   ++++    +a +++  +l + +d+   r+a  aL  i +++al+ L+  ld
  KHJ33506.1 144 L-EHRHVYVRKNAVFAIAsiYQHSEslipDAPELIYTFLeTESDTTCKRNAFAALLSICHEKALEYLTTVLD 214
                 5.78999***********652344334447788888899455789***********************9987 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00066
      HEAT_2  28 gnpealpaLvellededpavRraaaeaLgaigd.....pealpaLkellddddddvvR 80 
                 + +++l+++++lle+  + v ++aa +L ai +     ++a++   el+  + d  v+
  KHJ33506.1 241 NKTRYLRIIFDLLESNATTVVYEAASSLTAITSnpvavKAAASKFIELCIKEADNNVK 298
                 556899*************************744344478889999999888887776 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.061
      HEAT_2  11 dpdpevrraairaLg..rignp....ealpaLvellededpavRraaaea 54 
                  +d +v+  +++     r +n+     ++  ++++l+++d +vR+ a + 
  KHJ33506.1 292 EADNNVKLIVLDRVDtlRRNNEgildGLIMEILRVLSSPDLDVRKKALDI 341
                 55556666666666643344443333447788899999999999999873 PP

>> Coatomer_g_Cpla  Coatomer subunit gamma-1 C-terminal appendage platform
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       5.3   1.2e+04      28      53 ..     461     485 ..     459     491 .. 0.76
   2 !   22.4   0.0   4.5e-08    0.0001       2     109 ..     837     943 ..     836     948 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 5.3
                      EEEESS---HHHHHHHHHHHHT-EE- CS
  Coatomer_g_Cpla  28 tfaLssvksleeavdkliellgmqpl 53 
                      +++L + +++++a +k+  +lg  p+
       KHJ33506.1 461 EYSL-EASDIRDAWKKIRISLGEIPI 485
                      7889.679999999999988886665 PP

  == domain 2  score: 22.4 bits;  conditional E-value: 4.5e-08
                      GGEEE---S..-HHHHHHHH-STT-EEEEEEE.SS---HHHHHHHHHHHHT-EE-TTTT---SS-SEEEEEEEEEETTS-EEEEEEEEEE..SS CS
  Coatomer_g_Cpla   2 Dyikpvavs..nFeaaWeeleseaeavetfaL.ssvksleeavdkliellgmqplegsdkvpenassHtLklaGkfvggekvlvrarlalsssk 92 
                      Dyi+p+  +  +F+++W e e     ++++++ s+  sl++  ++l+ +++m+ l  +   + + +  + +l+  +v ge+ l+++++   +++
       KHJ33506.1 837 DYIQPATCTetQFRSMWTEFEW----ENKVNInSKAISLKDFLEQLMASTNMSCLTPKASMKGDCQFLSANLYARSVFGEDALANLSIEQGEDG 926
                      9****999888******99888....4667776799***********************99999999*************************** PP

                      .EEEEEEEEESSHHHHH CS
  Coatomer_g_Cpla  93 gvtlkltvRsedeevae 109
                      +vt  + +Rs ++ +a 
       KHJ33506.1 927 SVTGFVRIRSRSQGLAL 943
                      ************99875 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       1.7   3.7e+03       9      26 ..     109     126 ..     103     127 .. 0.82
   2 !    8.6   0.0    0.0011       2.5       7      30 ..     142     165 ..     136     166 .. 0.87
   3 ?    2.7   0.0     0.086   1.9e+02       3      29 ..     247     273 ..     246     274 .. 0.90
   4 ?    3.2   0.0     0.063   1.4e+02       5      21 ..     323     339 ..     320     346 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.7
                 HT-SSHHHHHHHHHHHHH CS
        HEAT   9 lsDpspeVReaAakaLga 26 
                 l++p+  +R ++++ L++
  KHJ33506.1 109 LQHPNEYIRGNTLRFLCK 126
                 899******999998876 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0011
                 HHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   7 kllsDpspeVReaAakaLgalaev 30 
                 ++l++ +  VR++A+ a++ ++++
  KHJ33506.1 142 SCLEHRHVYVRKNAVFAIASIYQH 165
                 6899999**************987 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.086
                 HHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLgalae 29 
                  ++  ll++++  V + Aa +L+a+ +
  KHJ33506.1 247 RIIFDLLESNATTVVYEAASSLTAITS 273
                 578999******************987 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.063
                 HHHHHT-SSHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAa 21 
                 +l+ ls+p+ +VR+ A+
  KHJ33506.1 323 ILRVLSSPDLDVRKKAL 339
                 46669*********997 PP

>> AP4E_app_platf  Adaptin AP4 complex epsilon appendage platform
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   3.3e-05     0.074       1      46 [.     841     886 ..     841     892 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.3e-05
  AP4E_app_platf   1 PltisteeFgklWlslsserkqklkssqvstlselkalleklslhv 46 
                     P+t +  +F  +W +++ e k++++s+++s+ + l++l+ + ++++
      KHJ33506.1 841 PATCTETQFRSMWTEFEWENKVNINSKAISLKDFLEQLMASTNMSC 886
                     7889999******************999998888899998887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (958 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       886  (0.0494171); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.76u 0.28s 00:00:01.04 Elapsed: 00:00:00.44
# Mc/sec: 6575.36
//
Query:       KHJ33507.1  [L=282]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-07   31.0   0.0    1.6e-07   30.8   0.0    1.2  1  Nuc_sug_transp  Nucleotide-sugar transporter
    0.00022   21.4  15.1      0.021   15.0   7.8    2.3  2  EamA            EamA-like transporter family
     0.0017   17.8   1.1     0.0029   17.0   1.1    1.4  1  TPT             Triose-phosphate Transporter family
     0.0068   16.0   4.7       0.41   10.1   4.7    2.2  1  SLC35F          Solute carrier family 35


Domain annotation for each model (and alignments):
>> Nuc_sug_transp  Nucleotide-sugar transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   3.7e-11   1.6e-07      82     167 ..      77     162 ..      54     280 .. 0.82

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 3.7e-11
  Nuc_sug_transp  82 dtlklavPsliYtvqnnllyvalsnLdaatyqvtyqlkilttalfsvllLkrklskkqWlslllLvaGvalvqlkqkeseesekaa 167
                       +   +P++  ++   l+ v+l  +  ++yq+t    ++   lfsv++L+r+l   qW++l+ +v+Gv +v l+ ++ ++++ + 
      KHJ33507.1  77 KVIFFGLPAMCDICGTTLMNVGLLFVAPSIYQMTRGALVFFVGLFSVIFLRRTLYLFQWFALFAVVLGVGIVGLAGASHDDQKATP 162
                     445567899999999***********************************************************999887776644 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   7.8   4.6e-06     0.021      61     135 ..      73     148 ..      56     150 .. 0.86
   2 !   10.8   0.7   9.3e-05      0.42       2      46 ..     188     237 ..     187     253 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 4.6e-06
        EamA  61 lkdwlll.lllgllgtvlafllffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvlli 135
                 l++w+ + + l +++ +++  l++ +l  + +s+  +     + f+ ++sv++l+ +l l+q+++++ ++lGv ++
  KHJ33507.1  73 LNGWKVIfFGLPAMCDICGTTLMNVGLLFVAPSIYQMTRGALVFFVGLFSVIFLRRTLYLFQWFALFAVVLGVGIV 148
                 566666544555588889999***************************************************9876 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 9.3e-05
        EamA   2 lgillallaalfwaiyfvlskillrkv..spltltfvrfliagill...l 46 
                 +gill+  a +f a+ fvl  ++l k+  +pl ++++  l+++i+    +
  KHJ33507.1 188 IGILLIAGAQIFTASQFVLEEYILGKFalEPLKAVGWEGLFGAIVTtlgM 237
                 79*********************9999899*************9975432 PP

>> TPT  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   1.1   6.6e-07    0.0029      70     138 ..      83     151 ..      56     176 .. 0.90

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 6.6e-07
         TPT  70 plalvktlghvlavvslskvaVSfthtvKasePiFtvilsrlllgeklsllvylsLlpivgGvalasvt 138
                   a++ ++g  l +v l  va S  ++ + +  +F  ++s ++l+ +l l  + +L  +v Gv +  + 
  KHJ33507.1  83 LPAMCDICGTTLMNVGLLFVAPSIYQMTRGALVFFVGLFSVIFLRRTLYLFQWFALFAVVLGVGIVGLA 151
                 469************************************************************998765 PP

>> SLC35F  Solute carrier family 35
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   4.7   9.1e-05      0.41     164     212 ..     189     240 ..      72     243 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 9.1e-05
      SLC35F 164 dllvlaGatlyavsn.vleeylvkklsl..vellgllglfGaiisaiqlail 212
                  +l++aGa +++ s  vleey++ k  l   + +g  glfGai++++ ++++
  KHJ33507.1 189 GILLIAGAQIFTASQfVLEEYILGKFALepLKAVGWEGLFGAIVTTLGMILM 240
                 4799*******9997589*****9876511567999********99887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       608  (0.0339115); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.36
# Mc/sec: 2323.36
//
Query:       KHJ33508.1  [L=981]
Description: putative chromo domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.8e-09   35.2   0.1      2e-08   34.0   0.1    1.7  1  Chromo    Chromo (CHRromatin Organisation MOdifier) domain
  ------ inclusion threshold ------
       0.05   13.0   0.0       0.11   11.9   0.0    1.4  1  Vel1p     Yeast-specific zinc responsive
       0.25   11.3   4.8       0.68    9.8   4.8    1.8  1  CSRNP_N   Cysteine/serine-rich nuclear protein N-terminus


Domain annotation for each model (and alignments):
>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.1   3.4e-12     2e-08       1      53 [.      34      83 ..      34      84 .. 0.94

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 3.4e-12
                EEEEEEEEEEEETTEECEEEEEEETTSTGGGTEEEEGGGCSSHSHHHHHHHHH CS
      Chromo  1 yeVerIidhrtdkdgleleYlVKWkglpysentWEpeenlekcfqelideFkk 53
                +eV +I+++  + ++    +l++W+g+p s +tWEp++++ +  + +i e+++
  KHJ33508.1 34 FEVKKILAENPNSKTA--TFLIQWEGYPVSRATWEPRKQIRHL-RSVINEWRQ 83
                69**************..**********************999.888999875 PP

>> Vel1p  Yeast-specific zinc responsive
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   1.8e-05      0.11     139     187 ..     695     743 ..     687     748 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.8e-05
       Vel1p 139 tGlanqllnattygvqvatclpgfaselldaptvnifnkdetlpsycea 187
                  Gl n+l++ ++y ++ + c+++f s ll+ap++   +++++l  +  a
  KHJ33508.1 695 WGLYNELFKLSQYYLNNSGCQKTFESVLLQAPSMINPDNEHELIRWFAA 743
                 699*****************************99888999999888766 PP

>> CSRNP_N  Cysteine/serine-rich nuclear protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   4.8   0.00011      0.68      50     127 ..     110     189 ..      72     205 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00011
     CSRNP_N  50 haieqkrlrreklrerlkeeklealklklsssdl..leeeeeealevddisdedldseaelddylflqplstkkrralLr 127
                  + + +++rr+  r+rl+++++++l+++l  ++   +e++e+  +++ddi ++ +++e e ++ + l p s ++rr ++ 
  KHJ33508.1 110 DERQSRKVRRAIKRKRLQKATKKELDWDLDFKSCvkTEKSENGLMTTDDIPENTIKKEPEEKNLVNLLPKSNRNRRKIIS 189
                 45677888899999999999999999886555540045555666799*****************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (981 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       962  (0.0536561); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.70u 0.27s 00:00:00.97 Elapsed: 00:00:00.47
# Mc/sec: 6278.81
//
Query:       KHJ33509.1  [L=212]
Description: putative ras gtpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      5e-63  211.5   0.2    6.4e-63  211.2   0.2    1.1  1  Ras          Ras family
    1.8e-35  121.8   0.2      3e-35  121.1   0.2    1.3  1  Roc          Ras of Complex, Roc, domain of DAPkinase
    5.1e-13   48.8   0.1    6.6e-13   48.5   0.1    1.1  1  Arf          ADP-ribosylation factor family
    7.3e-08   32.5   0.1    1.3e-07   31.7   0.1    1.4  1  MMR_HSR1     50S ribosome-binding GTPase
    0.00031   20.7   0.7      0.017   15.0   0.1    2.2  2  RsgA_GTPase  RsgA GTPase
    0.00053   19.4   0.1    0.00086   18.7   0.1    1.4  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
    0.00059   19.4   0.2     0.0031   17.1   0.1    2.0  2  GTP_EFTU     Elongation factor Tu GTP binding domain
     0.0023   18.2   0.1      0.018   15.3   0.0    2.2  1  AAA_22       AAA domain
  ------ inclusion threshold ------
       0.01   15.2   0.2      0.023   14.1   0.0    1.7  2  SRPRB        Signal recognition particle receptor beta subuni
      0.013   15.5   0.1       0.04   14.0   0.1    1.8  1  AAA_14       AAA domain
       0.02   15.3   0.1      0.031   14.7   0.1    1.5  1  AAA_16       AAA ATPase domain
      0.021   15.3   0.3      0.034   14.7   0.3    1.7  1  ABC_tran     ABC transporter
      0.026   14.2   0.1       0.06   13.1   0.1    1.7  1  AAA_24       AAA domain
      0.037   13.4   0.0       0.17   11.3   0.0    1.9  2  TniB         Bacterial TniB protein
      0.083   12.4   0.1       0.25   10.8   0.0    1.8  2  FeoB_N       Ferrous iron transport protein B
        0.1   12.7   0.1          2    8.6   0.0    2.2  2  SpoIIID      Stage III sporulation protein D
       0.11   12.2   0.7       0.19   11.5   0.5    1.6  2  AAA_21       AAA domain, putative AbiEii toxin, Type IV TA sy
       0.11   11.9   0.0       0.21   11.1   0.0    1.4  1  AAA_7        P-loop containing dynein motor region


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  211.2   0.2   6.4e-66   6.4e-63       1     161 [.      11     171 ..      11     172 .. 0.99

  Alignments for each domain:
  == domain 1  score: 211.2 bits;  conditional E-value: 6.4e-66
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 K+vl+Gds+vGK++ll rf++++F+ +++sTigv+f t++i+vd k++k +iwDTAGqe++++++++yyr+a g+llvydi++++++env++w++e+++
  KHJ33509.1  11 KVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRD 109
                 9************************************************************************************************** PP

                 HSTTTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHHH CS
         Ras 100 vaeenvpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 +a++n++i+LvGnK+Dl++ rav t+e++++a+e++l f+etSA ++ nve af+++l+ei+
  KHJ33509.1 110 HADSNIVIMLVGNKSDLRHLRAVPTDEAKAFASENNLSFIETSALDASNVELAFQNILTEIY 171
                 **********************************************************9986 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.1   0.2     3e-38     3e-35       1     119 [.      11     125 ..      11     126 .. 0.90

  Alignments for each domain:
  == domain 1  score: 121.1 bits;  conditional E-value: 3e-38
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 Kvvl+GdsgvGK+ ll+rf++++f+ ++kstigv+f+t+++ +++        k++k +iWDtaGqer+r++++ y+r+a  a+lvyd    +++en+ 
  KHJ33509.1  11 KVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSI-QVD-------AKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDiskHQTYENVT 101
                 9************************************9986.333.......36899*******************************76555679*** PP

                 HHHHHHHHHCSSS.-EEEEEE-TT CS
         Roc  97 eWlkelkkvagks.pvilvgnkiD 119
                 +Wlkel+++a+++ +++lvgnk D
  KHJ33509.1 102 RWLKELRDHADSNiVIMLVGNKSD 125
                 *********997626679****99 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.5   0.1   6.6e-16   6.6e-13      15     146 ..      10     147 ..       4     176 .. 0.80

  Alignments for each domain:
  == domain 1  score: 48.5 bits;  conditional E-value: 6.6e-16
                 EEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEEEE..EEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHC CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvt.tvPTigfnve..elei..knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkall 108
                 ++++l+G  + GK+ +l +++ +e++   + Tig +    ++++  k++k ++wD  Gqe+ R + + Y++   + + v D ++++  e+  + Lk+l 
  KHJ33509.1  10 FKVVLIGDSGVGKSNLLSRFTRNEFNLdSKSTIGVEFAtrSIQVdaKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELR 108
                 699*********************98548899986544114443449**************************************************87 PP

                 TSGCCTTSEEEEEEE-TTSTT..SS-HHHHHHHTTGGGSS CS
         Arf 109 eeeelkevallvlaNKqDlpe..alseeelrellgleelk 146
                 ++ + +++++++++NK Dl++  a+ ++e ++  + ++l+
  KHJ33509.1 109 DHAD-SNIVIMLVGNKSDLRHlrAVPTDEAKAFASENNLS 147
                 6665.67777888*****9853367777777766666665 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.7   0.1   1.3e-10   1.3e-07       1     110 [.      11     117 ..      11     123 .. 0.66

  Alignments for each domain:
  == domain 1  score: 31.7 bits;  conditional E-value: 1.3e-10
                 EEEEEESTTSSHHHHHHHHHTS.....TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT.TTCSHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge.....kaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflaleeadlillvvdas.eeklkpl 93 
                 +v+++G + vGKS L+++ t++        +    ++Tr i+         + +++Dt+G  e   + + ++ a+ +   a  +llv d+s +++++++
  KHJ33509.1  11 KVVLIGDSGVGKSNLLSRFTRNefnldSKSTIGVEFATRSIQVDAK---TIKAQIWDTAG-QE---RYRAITSAYYR--GAVGALLVYDISkHQTYENV 100
                 699*****************97443322233445577777777644...4678*******.54...34466777764..58899999999943356666 PP

                 HHHHHHHHHHTTSEEEE CS
    MMR_HSR1  94 deeleelleeakkplil 110
                  + l+el+++a+ ++++
  KHJ33509.1 101 TRWLKELRDHADSNIVI 117
                 66666665444444433 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   1.7e-05     0.017     102     122 ..      12      32 ..       9      73 .. 0.78
   2 ?    4.5   0.0      0.03        30      33      91 ..      98     160 ..      69     177 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.7e-05
                  EEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpe 122
                  +vl+G SGvGKS L+ +++ +
   KHJ33509.1  12 VVLIGDSGVGKSNLLSRFTRN 32 
                  69*************998876 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.03
                  HHHHHHHHHH...HHTT-EEEEEEE-GGG--HHH.HHHHHHHHHHHTTSEEEE--TTTHTTHH CS
  RsgA_GTPase  33 nlldrfLvla...eekgiepvivlnKiDlleeee.eleelkeelealgyevllvsaktkegle 91 
                  + ++r L ++    +++i +++v nK Dl + +   ++e k+  ++ +++++ +sa + +++e
   KHJ33509.1  98 ENVTRWLKELrdhADSNIVIMLVGNKSDLRHLRAvPTDEAKAFASENNLSFIETSALDASNVE 160
                  445555554411156788888888****99988866777888888888888888888777766 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.1   8.7e-07   0.00086       1     124 [.      11     127 ..      11     181 .. 0.67

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 8.7e-07
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsiiFdnylardt.lrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletl 98 
                 kv+L+G sg GK+ + s    n    d   ++g+   ++  +v   + ++ ++wD  Gqe++ + +    +++    vg+l+ V D+++++   + e+ 
  KHJ33509.1  11 KVVLIGDSGVGKSNLLSRFTRNEFNLDSkSTIGVEFATRSIQV-DAKTIKAQIWDTAGQERYRAIT----SAYYRGAVGALL-VYDISKHQ---TYENV 100
                 89****************9998877776145777777777777.47899***********998876....666777899987.99**9554...34444 PP

   Gtr1_RagA  99 keilealrqyspeakvfvli.hKmDli 124
                 ++ l++lr++     v +l+ +K Dl 
  KHJ33509.1 101 TRWLKELRDHADSNIVIMLVgNKSDLR 127
                 455555655554444444443677765 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.59   5.9e+02       5      25 ..      11      31 ..       9      41 .. 0.82
   2 !   17.1   0.1   3.2e-06    0.0031      54     185 ..      42     163 ..      33     198 .. 0.70

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.59
                EEEEEESTTSSHHHHHHHHHH CS
    GTP_EFTU  5 nigiighvDhGKtTLtdrLly 25
                ++++ig+   GK+ L+ r + 
  KHJ33509.1 11 KVVLIGDSGVGKSNLLSRFTR 31
                5889***********998765 PP

  == domain 2  score: 17.1 bits;  conditional E-value: 3.2e-06
                 SCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB..STHHHHHHHHHHH..HTTTEEEEEEESCGSTHHHHHHHHHHHHH CS
    GTP_EFTU  54 iTiksaaisleketkkylinliDtPGHvdFskevirglrvlDgavlvvdaveG..vepqteevlrlal..kegvpiivfiNKmDrlkaelkeiveevkq 148
                 i ++ a+ s++ + k+ + ++ Dt G + +   +++ +r + ga+lv d+++    e+ t+ + +l    + ++ i+++ NK D     l+ ++++  +
  KHJ33509.1  42 IGVEFATRSIQVDAKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHqtYENVTRWLKELRDhaDSNIVIMLVGNKSDLR--HLRAVPTDEAK 138
                 555555566666699999*******************************9966334444443333333003445577777****85..56667777776 PP

                 HHHHHHHHHHHHHHTTTTTEEEEEEBTTTTBTHHHHH CS
    GTP_EFTU 149 klsrkeeklekygekgekevpvvfgSalkgegvktll 185
                  +           +++ ++ +++ +Sal++ +v+  +
  KHJ33509.1 139 AF-----------ASE-NNLSFIETSALDASNVELAF 163
                 77...........122.35677888888877666333 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   1.8e-05     0.018       9     131 ..      13     123 ..      12     130 .. 0.50

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.8e-05
      AAA_22   9 vvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalraravielliiDEaqhlrs.e 106
                 v++G sG+GK+ ll r++++       +  +++++ v+ +  +  +  ++ +  ++ +     ++ + e ++a++ a  + av +ll+ D   h  + e
  KHJ33509.1  13 VLIGDSGVGKSNLLSRFTRNEF-----NLDSKSTIGVEFATRS-IQVDAKTIKAQIWD-----TAGQ-ERYRAITSAYYRGAVGALLVYDISKHQ-TyE 98 
                 89***************99863.....2356677766666665.33334444444442.....1122.223333333333333133333333333.234 PP

      AAA_22 107 ealeeLrsllnlsrkgvqliLvGtp 131
                 ++ ++L++l + +++++ + LvG  
  KHJ33509.1  99 NVTRWLKELRDHADSNIVIMLVGNK 123
                 4444444444444455555566555 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   2.3e-05     0.023       5     124 ..      11     126 ..       9     152 .. 0.74
   2 ?   -2.1   0.1       2.2   2.2e+03      23      47 ..     179     203 ..     163     207 .. 0.63

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.3e-05
                 EEEEE-STTSSHHHHHHHHHHSS---B---S.S-EEETTG.....GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHHH CS
       SRPRB   5 avllvGlsdsGKTslftrLttdsvkktvtSq.essaalkv..ksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAElly 100
                 +v+l+G s  GK  l+ r t ++++    S    ++a++    + k  k ++ D  G+e+ r   + +    + + g + v D +   +  ++v  +l 
  KHJ33509.1  11 KVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTiGVEFATRSiqVDAKTIKAQIWDTAGQERYRAITSAY---YRGAVGALLVYDISKH-QTYENVTRWLK 105
                 589*******************99877777766666666545577888999********999754444...4445555556665543.45566666666 PP

                 HHHHHHHHHTT---EEEEEE-TTS CS
       SRPRB 101 eilliteklkdavdiliACnKqel 124
                 e+  +      ++ i++  nK++l
  KHJ33509.1 106 ELRDHA---DSNIVIMLVGNKSDL 126
                 654333...366777777777776 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.2
                 HHHSS---B---SS-EEETTG...G CS
       SRPRB  23 LttdsvkktvtSqessaalkvksek 47 
                 L ++++++t +S  ++++l+ ++e+
  KHJ33509.1 179 LDNGETTQTNISAGTNISLSKTAEE 203
                 4455667777777666655554554 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1     4e-05      0.04       5     102 ..      12     124 ..      11     151 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4e-05
      AAA_14   5 lvitGaRrvGKTtllkqlikell.vkkesilyinldderdkkladpe..........kllelileklke.ekktylflD..Eiqevpewekalkslvde 89 
                 +v+ G   vGK+ ll ++ ++++  +++s++ +++ + + +  a++           + +++i + +++     +l+ D    q ++++ ++lk+l d+
  KHJ33509.1  12 VVLIGDSGVGKSNLLSRFTRNEFnLDSKSTIGVEFATRSIQVDAKTIkaqiwdtagqERYRAITSAYYRgAVGALLVYDisKHQTYENVTRWLKELRDH 110
                 57888899****************9***********999855443212223333343444555554322444555665533678889999999999998 PP

      AAA_14  90 g.knldvivtGSns 102
                   +n+ +++ G +s
  KHJ33509.1 111 AdSNIVIMLVGNKS 124
                 75677777776544 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.1   3.1e-05     0.031      27      52 ..      12      43 ..      11     183 .. 0.60

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 3.1e-05
      AAA_16 27 vllsGesGvGKsslvrellr...alekd.....g 52
                v+l+G+sGvGKs l+ ++ r       d     g
  KHJ33509.1 12 VVLIGDSGVGKSNLLSRFTRnefN--LDskstiG 43
                789************999874332..22334332 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.3   3.4e-05     0.034      13      42 ..      11      42 ..      10     198 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 3.4e-05
                EEEEEESTTSSHHHHHHHHTTSS--..SEEEE CS
                xxxxxxxxxxxxxxxxxxxxxxxxx..xxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkllagllkp..teGei 42
                kv+++G++G GKS Ll+ +++++ +   + +i
  KHJ33509.1 11 KVVLIGDSGVGKSNLLSRFTRNEFNldSKSTI 42
                689**************999987664444555 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   6.1e-05      0.06       4      41 ..      11      54 ..      10     120 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 6.1e-05
      AAA_24  4 kiliyGpsgiGKTtlakel......gpkplfidtekGlksldad 41
                k++++G+sg+GK+ l++++       ++   i +e  ++s+++d
  KHJ33509.1 11 KVVLIGDSGVGKSNLLSRFtrnefnLDSKSTIGVEFATRSIQVD 54
                89*****************6666665555555666655555555 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00017      0.17      38      63 ..      12      37 ..       8      72 .. 0.82
   2 ?   -0.6   0.0      0.75   7.5e+02     139     170 ..      97     130 ..      90     137 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00017
        TniB 38 lllvGdsnnGKtmivekFarlhppek 63
                ++l+Gds +GK+ ++++F+r++ + +
  KHJ33509.1 12 VVLIGDSGVGKSNLLSRFTRNEFNLD 37
                689****************9986544 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.75
        TniB 139 qreflnalksLgnel..kipivlvGteealralr 170
                  ++++  lk L ++   +i i lvG ++ lr+lr
  KHJ33509.1  97 YENVTRWLKELRDHAdsNIVIMLVGNKSDLRHLR 130
                 5566677777776551156667788887777665 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00026      0.25       2      56 ..      11      67 ..      10      77 .. 0.82
   2 ?   -1.2   0.0       1.3   1.3e+03     104     149 ..     113     159 ..      88     170 .. 0.56

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00026
                EEEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEEEEEEETT..EEEEEEE--- CS
      FeoB_N  2 tvalvGnpnvGkttlfnaltgakqkvgNwpGvtvekkegklklkg..keveivDlPG 56
                +v+l+G+  vGk+ l+ + t  + +    + + ve ++ +++++    +++i D  G
  KHJ33509.1 11 KVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAktIKAQIWDTAG 67
                799********************9999999999998888888766114556777766 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.3
                 TTSSEEEEEETHHHHHHTTEEE-H.HHHHHHHTS-EEEEBTTTTBTH CS
      FeoB_N 104 lgvpvvlalnmideaekkgieidl.kkLsekLgvpvvktsakkkegi 149
                  ++ ++l+ n++d  + + +  d+ k+++++ ++  ++tsa + +++
  KHJ33509.1 113 SNIVIMLVGNKSDLRHLRAVPTDEaKAFASENNLSFIETSALDASNV 159
                 34444444455555555555554313455555566666666665555 PP

>> SpoIIID  Stage III sporulation protein D
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.26   2.6e+02      27      52 ..      32      58 ..      20      74 .. 0.75
   2 ?    8.6   0.0     0.002         2      28      70 ..      88     131 ..      80     141 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.26
     SpoIIID 27 kvfgv.skstvhkDvterLkkinkkla 52
                ++f++ skst+  + + r  +++ k  
  KHJ33509.1 32 NEFNLdSKSTIGVEFATRSIQVDAKTI 58
                5565549*****999999999986543 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.002
     SpoIIID  28 vfgvskstvhkDvterLkkinkklakqvkevLeknkae.RhiRG 70 
                 v+++sk   + +vt  Lk++  +  +++  +L  nk++ Rh+R 
  KHJ33509.1  88 VYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDlRHLRA 131
                 799*********************************866***95 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.5   0.00019      0.19       3      19 ..      13      29 ..      11     109 .. 0.79
   2 ?   -1.1   0.0       1.4   1.4e+03     182     182 ..     126     126 ..      61     193 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00019
      AAA_21  3 vliGpNgsGKSnLLdal 19
                vliG+ g+GKSnLL  +
  KHJ33509.1 13 VLIGDSGVGKSNLLSRF 29
                9************9755 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1.4
      AAA_21 182 k 182
                 +
  KHJ33509.1 126 L 126
                 1 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00021      0.21      35      72 ..      11      49 ..       9      74 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00021
       AAA_7 35 pvllvGptGtGKtviikd.llkkldkekylsltinfsaq 72
                +v+l+G++G+GK+ ++++ + ++++ ++ +++ ++f  +
  KHJ33509.1 11 KVVLIGDSGVGKSNLLSRfTRNEFNLDSKSTIGVEFATR 49
                689***************666777777777777777544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       880  (0.0490825); expected 358.6 (0.02)
Passed bias filter:                      603  (0.0336327); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 1684.00
//
Query:       KHJ33510.1  [L=521]
Description: putative origin recognition complex subunit orc5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-70  238.0   0.1    1.8e-70  237.7   0.1    1.1  1  ORC5_C    Origin recognition complex (ORC) subunit 5 C-termin
    3.7e-08   33.9   0.0      1e-07   32.5   0.0    1.8  1  AAA_16    AAA ATPase domain
  ------ inclusion threshold ------
      0.066   12.3   0.1       0.11   11.5   0.1    1.3  1  T2SSE     Type II/IV secretion system protein


Domain annotation for each model (and alignments):
>> ORC5_C  Origin recognition complex (ORC) subunit 5 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.7   0.1   3.1e-74   1.8e-70       1     285 []     220     519 ..     220     519 .. 0.86

  Alignments for each domain:
  == domain 1  score: 237.7 bits;  conditional E-value: 3.1e-74
      ORC5_C   1 ihFppytreevleilskekpsngeeeeeeataklyerFvslvydslvkptardipelrsiceklWprFvaPildgelkpedfsrllaanralfrd.... 95 
                 i F++yt+ e+l+i+  +kp    +   e+t ++++rF s vydsl k+ +rd+ ++r++c +lWp F+ Pil+ e+ +++fsrl++ nr+lf++    
  KHJ33510.1 220 IFFQSYTKSELLKIILLTKPIPPLSSP-EDTFQIWSRFTSSVYDSLSKHSGRDLLSFRTLCLRLWPVFIHPILSDEIDVNSFSRLMVVNRSLFQNdyvl 317
                 78*************965444333333.569****************************************************************7777 PP

      ORC5_C  96 ....qgesalaeelvektaasssassasskssssklpeLpylaklLLiAAYLASynpprlDlrlFsktsgkskkrrkrrkgssqkskekakskkrkisq 190
                          + +++v++++++ +a  +++++++s +  Lp++++lLLiA+Y+AS+ p r+D+  F+k+s  + +rrk   g +++s++++  k+rki++
  KHJ33510.1 318 vhdiI----SPSSKVNNQTNEITAIINQKSQHTSIADLLPTYSRLLLIACYIASFSPVRNDTVTFTKSSTAK-RRRKG-YGLASTSSASGVVKSRKIPR 410
                 43331....23333366666666666677788888999*******************************433.44444.44455554555789****** PP

      ORC5_C 191 kllgPkaFpLeRllAIfqailpeeeaepseeess..e...........tlsvdvlsqiatLvslrllvrtsaaa.gdkldgsekwrvnVswevirelAr 275
                 kllg++ F LeR+lAIf+a+ ++++   +++e++  +           + +++v ++iatLvslrll+rt++ + +d ld+s+k+rv+++w+++r+lAr
  KHJ33510.1 411 KLLGAQGFVLERMLAIFHALCADSDFIVESDEKNflNnheaihsqlviNGNANVQTAIATLVSLRLLTRTGNPNiSDILDASIKYRVTIGWDMVRSLAR 509
                 ***********************9887777766665267899*****************************98899*********************** PP

      ORC5_C 276 svgfeleeYL 285
                 svg+e+e+YL
  KHJ33510.1 510 SVGIEIENYL 519
                 *********9 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   0.0   1.7e-11     1e-07       2     145 ..      19     172 ..      18     201 .. 0.55

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 1.7e-11
      AAA_16   2 lvGReeeleqLlsalervrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesa.......ipysalaqalareellrqlldeaesae 93 
                 +++Re+++++L+++++ ++  + ++++++G +++GK+ + +++l+++ +    f +  cd+ es          y+ + q ++    ++ +++e    e
  KHJ33510.1  19 FPCRERQIQALKTLIS-INGASNRNIIVHGLAATGKTVITKAILEEVAR----FYQSGCDRDESTssvksdnSKYDNIPQDIFS---YAFVNNE----E 105
                 89*************9.3333339********************86665....5777777774443344444444444444422...2222222....2 PP

      AAA_16  94 leawrekleeala.......avpelagaea..srllellkrll.allsrder......plvlvlDdlq 145
                   + r+ +e +++         ++ +g +a  s++l ++++ll +    + +       ++lvlD ++
  KHJ33510.1 106 CIDVRQLFEHTIGsichalnVENNNSGLLAniSDFLVQIQKLLeSWVGDR-KnvymekRFILVLDGID 172
                 22222222222222111111122222222245666666666665444443.24777656777777777 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   1.9e-05      0.11     116     154 ..      27      65 ..       9      70 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 1.9e-05
       T2SSE 116 ekiaevlrkavrerglilvsGgTgsGKttllyallkein 154
                 ++++ +++   +++ +i+v G   +GKt+++ a+l+e++
  KHJ33510.1  27 QALKTLISINGASNRNIIVHGLAATGKTVITKAILEEVA 65 
                 555555555556899*********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (521 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       677  (0.0377601); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.36
# Mc/sec: 4321.79
//
Query:       KHJ33511.1  [L=420]
Description: putative aromatic-l-amino-acid decarboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-87  292.2   0.0    5.3e-87  292.0   0.0    1.1  1  Pyridoxal_deC  Pyridoxal-dependent decarboxylase conserved do


Domain annotation for each model (and alignments):
>> Pyridoxal_deC  Pyridoxal-dependent decarboxylase conserved domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  292.0   0.0     3e-91   5.3e-87      44     374 ..       2     349 ..       1     350 [. 0.94

  Alignments for each domain:
  == domain 1  score: 292.0 bits;  conditional E-value: 3e-91
                    CSSH....HHHHHHHHHHHHHT-BTSSTTTSHHHHHHHHHHHHHHHHHTT--GGGTCC.T-EEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTS. CS
  Pyridoxal_deC  44 kllpagnslisllgdlLadainkngftweesPaltelevvvldwlaellglpeeflek.egggvlqvgssestllallAartkvikemkekgkelk 138
                    +++pa +s++++lg+l ++a  +  f+w  sPa+tele++vldwla+l++lpe f++   gggv+  ++se++l ++ Aar+k + e+  +   ++
     KHJ33511.1   2 AFFPASSSYPGILGELYSAAFTTPAFNWSCSPAMTELETIVLDWLAKLINLPECFQSSsTGGGVIHGSASEAILTVMTAAREKYLDEVTSHLTGTQ 97 
                    799*****************************************************9955***************************988755444 PP

                    HHHH....HCCEEEEEETTS-HHHHHHHHHHT-EEEEE--..BTTTBB-HHHHHHHHHHHHCTT.EEEEEEEEBS-TTT-BB--HHHHHHHHHH.. CS
  Pyridoxal_deC 139 eaei....ldklvlytsdqahssvekaalvlgvklrvipl..dengklrgaalekaieedkekGlipffvvatlGttvlgaFddlkelgdicek.. 226
                      e       ++++  s+  h s +kaa++lg++ ++ip+  ++n++++g +lek + e+k   l pff +atlGtt +++ dd + +   +++  
     KHJ33511.1  98 REEAmqykKSRMIALGSNSTHCSTQKAAKILGLRYISIPVypEDNYAMVGTNLEKVLSECKLLDLEPFFLTATLGTTATCSIDDFSSILSTLKRln 193
                    3333111145789999******************99999855789********************************************9999999 PP

                    .....CT-EEEEE-TTGGGGGGSGGGGGGGTTGGGESEEEEECCCCTS--SS-EEEEESSCCGCHHHH-EEECCCT.TT..TTTSEECCCGSSSSS CS
  Pyridoxal_deC 227 .....ydlwlHvDAAyaGsaficpeirhllkgieradSitvnphKlllvlldcsalivkdkealqqalqleaeYLehed..sdvaadlgtkaipls 315
                          +lw+HvDAAyaG+a++cpe++hl    e   S+++n hK+ll ++d+++l++++++ ++++l+++  YLe++   s+   d+++++ip++
     KHJ33511.1 194 llgqpGELWVHVDAAYAGAALVCPEFQHLTAAFEHFHSFNLNMHKWLLTNFDATCLFIRERKFIIECLSINRSYLENKAseSGQVIDYRDWQIPMG 289
                    9999999*********************************************************************87788999************ PP

                    GHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT.EEECSTTBSSEEEEEE CS
  Pyridoxal_deC 316 rrvrilklwfvlralGveglqnqirksvelakyleklirkder.feivaevelglVcFrl 374
                    rr+r+lk+wfvlr++Gv glq++ir++++l++ +++l++++ + f+i+a + +gl +F +
     KHJ33511.1 290 RRFRSLKIWFVLRSYGVTGLQAYIRNHIRLGEIFASLCNERADlFKIIAGPSFGLTVFTV 349
                    ********************************************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       599  (0.0334096); expected 358.6 (0.02)
Passed bias filter:                      555  (0.0309554); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.22s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 3209.24
//
Query:       KHJ33512.1  [L=197]
Description: putative synaptobrevin like protein ykt6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.4e-14   52.4   0.5      5e-14   51.9   0.5    1.2  1  Synaptobrevin  Synaptobrevin
    6.4e-13   48.6   0.0    1.2e-12   47.7   0.0    1.5  1  Longin         Regulated-SNARE-like domain
  ------ inclusion threshold ------
      0.073   12.6   0.0       0.15   11.6   0.0    1.4  1  DOT1           Histone methylation protein DOT1


Domain annotation for each model (and alignments):
>> Synaptobrevin  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   0.5   8.4e-18     5e-14       2      58 ..     135     191 ..     134     195 .. 0.96

  Alignments for each domain:
  == domain 1  score: 51.9 bits;  conditional E-value: 8.4e-18
                    XXHHHHHHHHHHCCCCHHCCHHHHCHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH CS
  Synaptobrevin   2 ndklakikaevdevkdimkeNidkvlergekldeLvdktenLqssaqqFkkqarklk 58 
                    +d+++ki++e+de+k ++++ i++vl+rgek+d+Lv k++ L+++++ F +qa+k++
     KHJ33512.1 135 ADSIMKIQKELDETKIVLHKTIESVLQRGEKIDDLVAKSDGLSAQSKMFYTQAKKQN 191
                    799***************************************************987 PP

>> Longin  Regulated-SNARE-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.7   0.0     2e-16   1.2e-12       3      79 ..      46     119 ..      41     123 .. 0.85

  Alignments for each domain:
  == domain 1  score: 47.7 bits;  conditional E-value: 2e-16
      Longin   3 lilkkishss..pqkltythdsytfhylaed.gltylviadesyprrlaFafLeeikreFlakygtaktadaadlrpyaf 79 
                 +++++    +  +q++ +++++ytfh + ++ g++ ++i+d++yp  +a+++L+++ +eFla ++  k++++++ +  +f
  KHJ33512.1  46 TVAER----TriGQRQDVEEQDYTFHAYGRSeGICGIIISDHAYPALVAHQLLSKVLDEFLALHP--KSEWSTSNPTLSF 119
                 55555....3468******999******9877*********************************..6778876666555 PP

>> DOT1  Histone methylation protein DOT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.5e-05      0.15       9      43 ..      22      56 ..      17      60 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.5e-05
                GGGGGS--SSGGG----B-HHHHHHHHHHTT--TT CS
        DOT1  9 aekLkkYkafsnevYGEllpeflsevldkvnlkke 43
                 ++L  Y  f+ + YGE ++ f ++v +++ +++ 
  KHJ33512.1 22 EKDLSAYSRFTRNNYGEFMTLFSKTVAERTRIGQR 56
                5789************************9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       824  (0.0459591); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1527.03
//
Query:       KHJ33513.1  [L=320]
Description: putative ras-like gtp-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.1e-39  133.2   0.0    1.4e-36  125.5   0.0    2.0  2  Ras          Ras family
    1.4e-30  106.0   0.0      2e-30  105.5   0.0    1.2  1  Roc          Ras of Complex, Roc, domain of DAPkinase
    3.5e-10   39.6   0.0      6e-10   38.8   0.0    1.4  1  Arf          ADP-ribosylation factor family
     0.0011   19.0   0.0      0.002   18.2   0.0    1.5  1  MMR_HSR1     50S ribosome-binding GTPase
     0.0075   16.7   0.0      0.011   16.1   0.0    1.3  1  AAA_16       AAA ATPase domain
  ------ inclusion threshold ------
      0.014   14.9   0.0       0.02   14.3   0.0    1.2  1  SRPRB        Signal recognition particle receptor beta subuni
      0.032   13.6   0.0      0.048   13.0   0.0    1.4  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
       0.06   13.2   0.1       0.13   12.1   0.1    1.6  1  RsgA_GTPase  RsgA GTPase
       0.13   12.0   0.1       0.31   10.7   0.0    1.6  2  AAA_24       AAA domain
       0.14   12.5   0.0       0.32   11.3   0.0    1.6  1  AAA_22       AAA domain
       0.23   11.0   0.1       0.37   10.3   0.1    1.3  1  AAA_7        P-loop containing dynein motor region


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.5   0.0   8.6e-40   1.4e-36       1     128 [.       8     142 ..       8     169 .. 0.90
   2 !    5.8   0.0    0.0056       9.1     139     160 ..     216     237 ..     196     239 .. 0.90

  Alignments for each domain:
  == domain 1  score: 125.5 bits;  conditional E-value: 8.6e-40
                 EEEEEESTTSSHHHHHHHHHHSSCSS.SCTTTSSEEEEEEEEEET..TEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFke.eyesTigvdfytkeievd..gkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwvee 96 
                 K+v++G+++vGKtsl++r+v+++F+  +  sT+g+ f+tk++  d  ++ v+l+iwDTAGqe+f+s+ +lyyr+a++++l+y+i + +sf+++  w+ e
  KHJ33513.1   8 KIVVLGSQGVGKTSLVHRYVRNQFQPaNISSTVGASFLTKKVLDDesDTVVRLQIWDTAGQERFRSISRLYYRGANACILCYSIMDLNSFTEMGVWLLE 106
                 9***********************8615679***********988667889************************************************ PP

                 HHHHSTTTSEEEEEEETTTGGG....G-SS-HHHHH CS
         Ras  97 ikrvaeenvpivLvGnKvDlee....kravsteege 128
                 ++r  + ++ + +vG+K+Dl +     r v +e+  
  KHJ33513.1 107 LRRNLPPDIILHVVGTKSDLVSrdpsLRRVPFERCI 142
                 ******99************9866665555555544 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0056
                 EEEBTTTTCTHHHHHHHHHHHH CS
         Ras 139 letSAktnenveeafeellrei 160
                  e+SA++ e+vee+f  ++r++
  KHJ33513.1 216 HEVSAESGEGVEEVFRVITRKL 237
                 59****************9987 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.5   0.0   1.2e-33     2e-30       1     119 [.       8     125 ..       8     126 .. 0.88

  Alignments for each domain:
  == domain 1  score: 105.5 bits;  conditional E-value: 1.2e-33
                 EEEEESSTTSSHHHHHHCHCT-CCC-EE.ETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfseke.kstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenl 95 
                 K+v++G +gvGKtsl++r+v+++f++ + +st+g++fltk+v   +     ++ + v+l+iWDtaGqerfrs+ +ly+r+a+++il+y     +s++++
  KHJ33513.1   8 KIVVLGSQGVGKTSLVHRYVRNQFQPANiSSTVGASFLTKKVL--DD----ESDTVVRLQIWDTAGQERFRSISRLYYRGANACILCYSimdLNSFTEM 100
                 9***********************9876379*********983..33....233579*****************************9964437789999 PP

                 HHHHHHHHHHCSSS-EE.EEEE-TT CS
         Roc  96 keWlkelkkvagkspvi.lvgnkiD 119
                   Wl el+++ + ++++ +vg+k D
  KHJ33513.1 101 GVWLLELRRNLPPDIILhVVGTKSD 125
                 9*********9988776599***99 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.0   3.7e-13     6e-10      12     128 ..       4     127 ..       1     134 [. 0.83

  Alignments for each domain:
  == domain 1  score: 38.8 bits;  conditional E-value: 3.7e-13
                 TTEEEEEEEESTTSSHHHHHHHHHHSSCEE..CSSSSSEEEEEEEE......TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHH CS
         Arf  12 kkelrilllGLDnaGKtTilkklkleelvt..tvPTigfnveelei......knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeake 102
                 + e++i++lG  + GKt +++++  ++++   ++ T+g    + ++        +++++wD  Gqe+ R++ + Y++  +a i +   +d + ++e+  
  KHJ33513.1   4 SLEAKIVVLGSQGVGKTSLVHRYVRNQFQPanISSTVGASFLTKKVlddesdTVVRLQIWDTAGQERFRSISRLYYRGANACILCYSIMDLNSFTEMGV 102
                 5689**********************99744499999976544444445655679*****************************************999 PP

                 HHHHHCTSGCCTTSEEEEEEE-TTST CS
         Arf 103 eLkalleeeelkevallvlaNKqDlp 128
                  L +l  ++   +++l v++ K Dl 
  KHJ33513.1 103 WLLELR-RNLPPDIILHVVGTKSDLV 127
                 998864.4445677788888888875 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   1.2e-06     0.002       1      71 [.       8      79 ..       8     136 .. 0.62

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 1.2e-06
                EEEEEESTTSSHHHHHHHHHTS...TEEESSST...TSSSSEEEEEEEETT.EEEEEEECGGCSSHHHHHHHHHHHHH CS
    MMR_HSR1  1 evaivGrpNvGKStLinaltge...kaivsdkp...gtTrdinegrvklkg.keielvDtpGliegaseekglgkafl 71
                +++++G   vGK++L+ + +++    a +s++    + T+++   + +     +++++Dt+G  e   + +++++ + 
  KHJ33513.1  8 KIVVLGSQGVGKTSLVHRYVRNqfqPANISSTVgasFLTKKVLDDESD--TvVRLQIWDTAG-QE---RFRSISRLYY 79
                589*****************9644434555444233778888777776..3378********.33...1123333333 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   6.8e-06     0.011      27      86 ..       9      75 ..       3     148 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 6.8e-06
      AAA_16 27 vllsGesGvGKsslv.rellralekd......ggiflrgkcdqlesaipy.salaqalareellrqll 86
                +++ G +GvGK+slv r ++++++ +      g+ fl+ k  + es++   +++++++ + e +r + 
  KHJ33513.1  9 IVVLGSQGVGKTSLVhRYVRNQFQPAnisstvGASFLTKKVLDDESDTVVrLQIWDTAGQ-ERFRSIS 75
                689************888888888889999988999888888887775553668888855.7777665 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.2e-05      0.02       4      64 ..       7      73 ..       4      84 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.2e-05
                -EEEEE-STTSSHHHHHHHHHHSS---B---S...S-EEETTG......GGTT-SEEEETT-GCCSH CS
       SRPRB  4 pavllvGlsdsGKTslftrLttdsvkktvtSq...essaalkv...ksekgskltliDfPGheklrq 64
                 +++++G +  GKTsl +r   ++++++ +S    +s +++kv   +s+   +l++ D  G+e++r+
  KHJ33513.1  7 AKIVVLGSQGVGKTSLVHRYVRNQFQPANISStvgASFLTKKVlddESDTVVRLQIWDTAGQERFRS 73
                57999******************9999998875544556667675566666778899******9996 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0     3e-05     0.048       1      63 [.       8      73 ..       8     137 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3e-05
   Gtr1_RagA  1 kvLLmGksgsGKtsm.rsiiFdnylardtlr.lgatidveksev.rflgnltlnlwDcgGqeafve 63
                k++ +G +g GKts+ ++ + +++++ ++ + +ga+  ++k    +    + l++wD  Gqe+f  
  KHJ33513.1  8 KIVVLGSQGVGKTSLvHRYVRNQFQPANISStVGASFLTKKVLDdESDTVVRLQIWDTAGQERFRS 73
                7899**********73567888899998865155554333332212345679**********9964 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   8.2e-05      0.13      97     132 ..       5      38 ..       1      49 [. 0.76

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 8.2e-05
                  CTTSEEEEECSTTSSHHHHHHHHCTT-----S---- CS
  RsgA_GTPase  97 lkdktsvlvGqSGvGKStLinallpelelktgevse 132
                  l+ k +v++G+ GvGK++L+ + + + + + +++s+
   KHJ33513.1   5 LEAK-IVVLGSQGVGKTSLVHRYVRN-QFQPANISS 38 
                  5555.4678***********999988.556666665 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00019      0.31       2      22 ..       6      26 ..       5      38 .. 0.87
   2 ?   -2.2   0.0       1.7   2.8e+03     156     172 ..      46      62 ..      28      76 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00019
      AAA_24  2 klkiliyGpsgiGKTtlakel 22
                ++ki++ G++g+GKT+l+ ++
  KHJ33513.1  6 EAKIVVLGSQGVGKTSLVHRY 26
                589**************9887 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.7
      AAA_24 156 tanelkeevDlvlranl 172
                 t++ l  e+D+v+r+++
  KHJ33513.1  46 TKKVLDDESDTVVRLQI 62 
                 68889999999999987 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0    0.0002      0.32       8      32 ..       9      33 ..       5      83 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.0002
      AAA_22  8 lvvtGesGtGKTtllrrlleqldee 32
                +vv G  G+GKT l+ r++++  + 
  KHJ33513.1  9 IVVLGSQGVGKTSLVHRYVRNQFQP 33
                7999**************9986433 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   0.00023      0.37      34      66 ..       7      39 ..       2      49 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00023
       AAA_7 34 kpvllvGptGtGKtviikdllkkldkekylslt 66
                 ++++ G++G+GKt+++++++++  +   +s t
  KHJ33513.1  7 AKIVVLGSQGVGKTSLVHRYVRNQFQPANISST 39
                578999*************76665444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2455.53
//
Query:       KHJ33514.1  [L=450]
Description: putative ubx domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      8e-09   35.6   0.0    1.5e-08   34.7   0.0    1.5  1  UBX       UBX domain


Domain annotation for each model (and alignments):
>> UBX  UBX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.0   8.6e-13   1.5e-08       4      80 ..     249     331 ..     246     332 .. 0.89

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 8.6e-13
                 SSEEEEEEEETTSTEEEEEEESSSBH.HHHHHHHHHHCCCCCTS...EE.EEETTTTEEGGCCC.CSBCCCCTTTSCEEEEEE CS
         UBX   4 edatrlqiRlpdGsrlvrrFkksdtl.esvyeyVdsklfekeep...Fq.LltsfPrreltksd.kktLsdlgllpnstlvle 80 
                  d+t l  Rl dGs+++ +F++ +tl ++v++y + ++   +++   F+  l+++P+r+++ ++  ++L dlg +p++tl+l+
  KHJ33514.1 249 HDTTFLLFRLFDGSTIRTKFPSAATLsNEVRNYLSENQPAISNQpyvFKhVLSPLPNRKIEAAEeTQSLRDLGCVPSATLILA 331
                 6788999**************99887469***********99999885435699***************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1150  (0.0641419); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 3093.73
//
Query:       KHJ33515.1  [L=486]
Description: putative histone-fold containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-47  159.1   0.1    6.5e-47  158.1   0.1    1.5  1  CENP-T_C  Centromere kinetochore component CENP-T histone fol
    8.6e-09   35.7   0.1    1.9e-08   34.6   0.1    1.5  1  CENP-S    CENP-S protein


Domain annotation for each model (and alignments):
>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.1   0.1   7.2e-51   6.5e-47       1     107 [.     373     480 ..     373     481 .. 0.98

  Alignments for each domain:
  == domain 1  score: 158.1 bits;  conditional E-value: 7.2e-51
    CENP-T_C   1 rgievpslPaavvkklakrfakasg.skaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkrqrkvtskttlfslaqryLPrEl 98 
                 +gi +pslPa+vvk+la +fak+ g +k k++ke+l+al++a+d+ffeq ++DL+aya HagRKtid+sDv++Lm+rqr+++sktt+f laq+yLPrEl
  KHJ33515.1 373 HGIPYPSLPAGVVKRLALTFAKTAGnRKPKINKETLEALMQATDWFFEQASDDLRAYAMHAGRKTIDDSDVVTLMRRQRQINSKTTPFFLAQKYLPREL 471
                 7999*********************************************************************************************** PP

    CENP-T_C  99 lqelrmeae 107
                 +qelrm+a+
  KHJ33515.1 472 IQELRMTAN 480
                 ******875 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.1   2.1e-12   1.9e-08      19      75 ..     396     452 ..     383     453 .. 0.89

  Alignments for each domain:
  == domain 1  score: 34.6 bits;  conditional E-value: 2.1e-12
      CENP-S  19 aaekeveatkqfiaaltelvykqlenlakDLeaFakHAkRstittdDvlLlaRrnes 75 
                 a +++ +++k++++al+  +    e+ ++DL a+a HA+R+ti+ +Dv+ l+Rr+++
  KHJ33515.1 396 AGNRKPKINKETLEALMQATDWFFEQASDDLRAYAMHAGRKTIDDSDVVTLMRRQRQ 452
                 556677899999******99999*******************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 3822.91
//
Query:       KHJ33516.1  [L=367]
Description: putative dna-binding protein hgh1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.7e-56  188.5   2.0    1.8e-54  184.4   0.0    3.1  4  DUF383      Domain of unknown function (DUF383)
    6.3e-19   67.6   0.8    1.2e-18   66.7   0.8    1.5  1  DUF384      Domain of unknown function (DUF384)
    0.00028   20.4   2.9      0.016   14.7   1.7    2.4  2  Arm_2       Armadillo-like
  ------ inclusion threshold ------
       0.12   12.1   0.0       0.24   11.1   0.0    1.5  1  Adeno_knob  Adenoviral fibre protein (knob domain)


Domain annotation for each model (and alignments):
>> DUF383  Domain of unknown function (DUF383)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.92   4.1e+03     104     121 ..       5      22 ..       3      27 .. 0.71
   2 ?    0.8   0.1     0.073   3.3e+02      13      31 ..      63      80 ..      52      93 .. 0.60
   3 !  184.4   0.0   3.9e-58   1.8e-54       3     188 ..      95     278 ..      93     280 .. 0.92
   4 ?    0.2   0.0      0.12   5.2e+02      25      59 ..     322     356 ..     316     364 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.92
      DUF383 104 lqkllpftehksiirRgG 121
                 l++l+ f++h ++  R+ 
  KHJ33516.1   5 LEELVSFISHGNTQIRQS 22 
                 678999**9955555554 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.073
      DUF383 13 acmLLsNltkeesiaaqll 31
                a  +L Nl++ +++++ ll
  KHJ33516.1 63 ALTILMNLSQDSEVQK-LL 80
                4556666666666655.33 PP

  == domain 3  score: 184.4 bits;  conditional E-value: 3.9e-58
      DUF383   3 ldskslladlacmLLsNltkeesiaaqlleaklkvsqtpeessksvkalekLldlfvkgatkdlnksanydylayvfanlsqlpegRelllepqesdke 101
                 +++++++   + mLLsNl+k+++ ++++l+++l   +  +   ++ k ++ +ld+fvkg+ ++ ++ +nydyl+yvf++l+ lpe+R++ll+pq++d+ 
  KHJ33516.1  95 ANPNEPNIAEITMLLSNLSKNDKFKRKFLNQNL--VS--KPYLSAGKPIDFILDIFVKGTIDSKDQVSNYDYLSYVFSDLAILPEIRKHLLTPQSYDQI 189
                 789999999********************7655..33..335689999*********999777777799****************************** PP

      DUF383 102 lplqkllpftehksiirRgGvastiKNccFekeahklLlseee..vdllpylllpLagpeeldeedqekLpeelqllpedKeRepdsdi 188
                 +p++kl++ft+h+s irR Gva++iKN+cFe e+h+ Ll+ +e  + llpylllpL+++ee+d  d+e++ ee+qllp++K+Re+d+ i
  KHJ33516.1 190 IPFSKLIVFTSHESRIRRLGVAGAIKNVCFEVESHQILLDTSEngLRLLPYLLLPLMDGEEYDTYDSEGMLEECQLLPDSKKREDDPMI 278
                 ***************************************95445699***************************************988 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.12
      DUF383  25 siaaqlleaklkvsqtpeessksvkalekLldlfv 59 
                 +i+++l++  ++ +++++e+s ++ a+++L++ f 
  KHJ33516.1 322 DICDRLVNVLMRDEEDTKEESGNKSAIVNLVEHFP 356
                 56777776656667777778889999999999987 PP

>> DUF384  Domain of unknown function (DUF384)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7   0.8   2.7e-22   1.2e-18       1      53 [.     285     337 ..     285     339 .. 0.97

  Alignments for each domain:
  == domain 1  score: 66.7 bits;  conditional E-value: 2.7e-22
      DUF384   1 sLllLcatrhgReyLRskgvYpilRelhkaekdeeveeaierlVqvLirdEse 53 
                 sLllL++tr gR+ LR+ +vYpi+R+lh+a +   v++ ++rlV+vL+rdE+ 
  KHJ33516.1 285 SLLLLTSTRAGRDQLRKIRVYPIIRQLHLAIESHCVKDICDRLVNVLMRDEED 337
                 8**************************************************97 PP

>> Arm_2  Armadillo-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.4   0.0    0.0049        22     134     180 ..       3      52 ..       1      61 [. 0.74
   2 !   14.7   1.7   3.6e-06     0.016     114     175 ..      62     126 ..      56     130 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0049
       Arm_2 134 syisellsLLskGnekikvqvLkvllnls...eNpamtrellsakvlssl 180
                 s ++el+s +s+Gn +i+   L +l+  s    N   t++ll +k l+ l
  KHJ33516.1   3 SDLEELVSFISHGNTQIRQSALELLVPYSckePNIFKTDQLLPVKRLAFL 52 
                 568899*******************9887321344557777777766655 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 3.6e-06
       Arm_2 114 agLklltnlsvtneyqhllv...syisellsLLskGnekikvqvLkvllnlseNpamtrellsak 175
                  +L++l+nls  +e q ll+   +++++l++ L++ ne    ++  +l+nls+N +  r++l+ +
  KHJ33516.1  62 NALTILMNLSQDSEVQKLLTcndDFLQTLFKQLANPNEPNIAEITMLLSNLSKNDKFKRKFLNQN 126
                 68*****************755579**********************************999865 PP

>> Adeno_knob  Adenoviral fibre protein (knob domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   5.3e-05      0.24      93     152 ..     104     161 ..      63     170 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 5.3e-05
                 --GGGSB-TTTS-B-SS--GGGEEEEEEEGGG-TTSEEEEEEEESGGGS--STT---SEE CS
  Adeno_knob  93 navgfmpnllaypktqsqtaknnivsqvylhgdktkpmiltitlngtsestetsevstys 152
                 +   ++ nl    k + +  ++n+vs+ yl   k   +il i ++gt +s +  +vs y 
  KHJ33516.1 104 EITMLLSNLSKNDKFKRKFLNQNLVSKPYLSAGKPIDFILDIFVKGTIDSKD--QVSNYD 161
                 33456789999999999999*****************************986..455553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 2875.15
//
Query:       KHJ33517.1  [L=328]
Description: putative cox1 assembly protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-46  157.4   0.0    5.9e-46  156.9   0.0    1.1  1  SURF1     SURF1 family


Domain annotation for each model (and alignments):
>> SURF1  SURF1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.9   0.0   3.3e-50   5.9e-46       2     176 .]      89     300 ..      88     300 .. 0.82

  Alignments for each domain:
  == domain 1  score: 156.9 bits;  conditional E-value: 3.3e-50
       SURF1   2 vpvvvlfgLGtWQlqRlkwkealiaeleerlaaeplplleka.lealeefeyrrvtvtGrfdhdkevlvgngqprv.....Gylvltplrleddgeavl 94 
                 +p v++f+LGtWQ+qRlkwk++lia+ e+rl ++plpl++++ +ea+++f+yrrv  +G+++hdke+lvg   prv     G+lv+tpl+++++g+ +l
  KHJ33517.1  89 IP-VTAFALGTWQVQRLKWKTNLIAKFEDRLVRPPLPLPPRVdPEAIHDFDYRRVFTKGHYRHDKEMLVG---PRVndgkdGFLVITPLERKENGTSIL 183
                 67.99*********************************9998766667**********************...99889999**********778***** PP

       SURF1  95 VnrGWvpaea..eklpka.....apegeevrevtGllr....kss.tpapeeesgewqvqsidvaalaealgaqkvlpvvl.................. 163
                 VnrGW+ ++   +kl  +      p+ +ev+ v+Gllr    k++ tp++++e+g++  ++ dv+++ae +g   +++v++                  
  KHJ33517.1 184 VNRGWIDKKFkdQKL--RdpimgCPQ-GEVQ-VEGLLRepfkKNMfTPDNSPEQGKF--YFPDVKQMAEIAG---SQTVWIeetmtpdlitswsreskg 273
                 ******997753333..246886444.4588.******9886666777544577755..***********87...444443333444555777777778 PP

       SURF1 164 ..............hlgYaltWfglaa 176
                               h++Y++tW++l+a
  KHJ33517.1 274 ipigrapevnlrnnHAQYIFTWYALSA 300
                 88888888889999***********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.21s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2656.31
//
Query:       KHJ33518.1  [L=274]
Description: hypothetical protein EV44_g4429 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-83  280.4   8.1    1.3e-83  280.2   8.1    1.0  1  CMS1        U3-containing 90S pre-ribosomal complex subunit
    0.00016   21.5   0.0    0.00032   20.5   0.0    1.3  1  DEAD        DEAD/DEAH box helicase
  ------ inclusion threshold ------
      0.095   12.8   0.0       0.16   12.1   0.0    1.4  1  ELMO_CED12  ELMO/CED-12 family
       0.29   11.3   1.3       0.41   10.8   0.2    1.9  2  YqaJ        YqaJ-like viral recombinase domain


Domain annotation for each model (and alignments):
>> CMS1  U3-containing 90S pre-ribosomal complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  280.2   8.1   2.9e-87   1.3e-83       8     252 .]      21     274 .]      14     274 .] 0.89

  Alignments for each domain:
  == domain 1  score: 280.2 bits;  conditional E-value: 2.9e-87
        CMS1   8 rkaenkekgkkkksek........kRskkkerkkgklketq.DvkaglteavalqdpelLadylaqklkriekDlsdveLeDkyisasaikDttsftkP 97 
                 +k   k+k kk+k+++        k+ k k+r     +et+ Dv++gl++++a +d + Lady+a++ k  e+Dls +eLeDkyisas i +t+s++kP
  KHJ33518.1  21 SKDRVKNKEKKRKRNEiqsstglvKKLKTKRRT--FENETKiDVETGLNNSFAEMDSQSLADYVAKRTKTYESDLSPIELEDKYISASFIVNTVSWQKP 117
                 344445666777766677777654333333333..2345667********************************************************* PP

        CMS1  98 rtldnlpdyleelsefakklvksaksngsPelLvltlaalRaaDlaralkklqtkdskvakLFakhikleesvtylkksrigiavGtpgRildLleees 196
                 r+l+nlp++le++se  kkl  ++k ng+P+ Lv++ a+lRa ++ar ++ + +k+ kvakLFakhik++es+++lk++r+giavGtp+Ri+dL+ +++
  KHJ33518.1 118 RSLENLPQFLEQYSEDVKKLWSASKKNGAPHSLVIACAGLRASEIARFIRRYPKKEAKVAKLFAKHIKIQESINFLKTNRTGIAVGTPQRIIDLIIDGT 216
                 *************************************************************************************************** PP

        CMS1 197 lsvdeLkrivlDasfvDkknrgildiretrkeviklLgakevkerle..ekkvkvvfy 252
                 l+vd+Lkri++Das++D+k+rgil+i+et+ +++klL+ ke++er+   + + k++fy
  KHJ33518.1 217 LRVDHLKRIIIDASHIDQKKRGILEIKETQVPLVKLLALKEIRERFVteKDNIKLIFY 274
                 *********************************************9843556778887 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   7.2e-08   0.00032      42     131 ..     140     231 ..     122     240 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 7.2e-08
                 S.TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEE.EEETTSSHHHHHHHHH.TTCSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHH CS
                 x.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  42 t.kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvl.liiggvaardqlskld.ngvdivvgtpgrlddllstgklnlsqvrflVlDEad 131
                   k++ +p  l+++     a ++++ ++++ k+   +v  l+ +  + ++ ++ l+ n++ i vgtp+r++dl+ +g+l++++++ +++D  +
  KHJ33518.1 140 AsKKNGAPHSLVIACAGLRASEIARFIRRYPKKEA-KVAkLFAKHIKIQESINFLKtNRTGIAVGTPQRIIDLIIDGTLRVDHLKRIIIDASH 231
                 25778888888888888889999999999999743.55537788889999999998566***************99**************666 PP

>> ELMO_CED12  ELMO/CED-12 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.6e-05      0.16      68     112 ..     119     163 ..     118     226 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.6e-05
  ELMO_CED12  68 gLenLlyfaenheeefqkllsessrrpseeeypfavasinvtsll 112
                 +LenL  f e+++e ++kl+s s+++ + ++  +a a++  +++ 
  KHJ33518.1 119 SLENLPQFLEQYSEDVKKLWSASKKNGAPHSLVIACAGLRASEIA 163
                 69*********************************9999988887 PP

>> YqaJ  YqaJ-like viral recombinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.51   2.3e+03      62      80 ..      51      71 ..      19      92 .. 0.75
   2 ?   10.8   0.2   9.2e-05      0.41      56     116 ..     171     247 ..      98     262 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.51
        YqaJ 62 raeyelatgdkvrd..sgglf 80
                r+++e++t+ +v+    ++++
  KHJ33518.1 51 RRTFENETKIDVETglNNSFA 71
                667777777777665444444 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 9.2e-05
        YqaJ  56 elEplaraeyelatgdkvrdsgglfespsdkflgaspDgii..................shasidalkrrllEikspfe 116
                 + E ++++++++ ++  +++s  ++++++  +++  p +ii                  +   id++kr++lEik    
  KHJ33518.1 171 KKEAKVAKLFAKHIK--IQESINFLKTNRTGIAVGTPQRIIdliidgtlrvdhlkriiiDASHIDQKKRGILEIKETQV 247
                 6799999***99999..88888999999999999999999988888888999998888755556688********8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1098  (0.0612416); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2189.45
//
Query:       KHJ33519.1  [L=301]
Description: putative macrophomate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.9e-27   93.5   0.2    1.4e-26   93.0   0.2    1.1  1  HpcH_HpaI  HpcH/HpaI aldolase/citrate lyase family


Domain annotation for each model (and alignments):
>> HpcH_HpaI  HpcH/HpaI aldolase/citrate lyase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.0   0.2   7.8e-31   1.4e-26      13     185 ..      45     236 ..      39     249 .. 0.88

  Alignments for each domain:
  == domain 1  score: 93.0 bits;  conditional E-value: 7.8e-31
                 HHHHHCTC--SEEEEESSTSSSHHHHHHHHHHHHHHHHHHHHCTTTSSEEEEE-SSTTHHHHHHHGGHHHTTSSEEEESS--SHHHHHHHHHHTSHTTT CS
   HpcH_HpaI  13 laekaaiagaDsvliDlEdavalaeKdaARvlvsealkqldalaaaasevvVRvnsldselikqdlevldlgaqvvlvPkvetaeealevvsalrepek 111
                 +a+++++ g D v+iD  +        +A +l+ ++++++++ ++ ++ ++VRv+s +s l+++   +ld+ga ++++P ++t+eea+ +vs +r++  
  KHJ33519.1  45 VARTVSVLGSDFVMIDALHTA-----IDAENLI-QLIQTINFTSEGNTVAIVRVPSANSDLLAH---ALDAGAAGIVFPHIDTPEEAALAVSKCRYACS 134
                 689999**********99988.....5665555.6999999999999*****************...*****************************987 PP

                 S---........................HCCC-EEEEEE-SHHHHHTHHHHHTSTTEEEEEE-HHHHHHHTT-TTSTTSHHHH....HHHHHHHHTTHC CS
   HpcH_HpaI 112 girg........................anketrllaqiEsaegvknaeeIaavegldgvflGaeDlsadlgtkrspegtevl....dareriltaara 182
                 g  +                        a+ ++ +++qiEs + v+nae+Ia+v+g+ ++++Ga Dl  +lg+  +++g++         ++++  +++
  KHJ33519.1 135 GGDRslspsaliagitdiapdglshthvADRNIAIICQIESPLSVQNAEKIASVPGVNVLMIGAGDLRLSLGLPVKASGEQENpiflRMVNQVIEVSKK 233
                 66557*******************************************************************999888776544445666777777776 PP

                 EEE CS
   HpcH_HpaI 183 agi 185
                  +i
  KHJ33519.1 234 LKI 236
                 666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       678  (0.0378158); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2104.91
//
Query:       KHJ33520.1  [L=211]
Description: hypothetical protein EV44_g3676 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.065   14.0   1.1       0.12   13.1   0.0    2.0  2  zf-RVT    zinc-binding in reverse transcriptase


Domain annotation for each model (and alignments):
>> zf-RVT  zinc-binding in reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.3      0.31   5.6e+03      24      32 ..      49      57 ..      12      62 .. 0.59
   2 ?   13.1   0.0   6.5e-06      0.12      43      80 ..     117     155 ..      92     159 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.31
      zf-RVT 24 Wkskappkv 32
                W+s+ p+k+
  KHJ33520.1 49 WESSWPHKH 57
                555555555 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 6.5e-06
      zf-RVT  43 rlptadnllkrgies.ssrCqlCgqeeEtieHlfleCpf 80 
                 ++  ++ l +r+++  +++ + Cg   E+++H +++Cp+
  KHJ33520.1 117 HIGLKSYLYRRKVPGvNNQSCPCGYPSENVKHTVMACPL 155
                 5667788999999976888999***************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       725  (0.0404373); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1707.13
//
Query:       KHJ33521.1  [L=208]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.35
# Mc/sec: 1777.45
//
Query:       KHJ33522.1  [L=190]
Description: hypothetical protein EV44_g3267 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.023   14.5   0.8       0.56   10.0   0.0    2.5  2  Soyouz_module  N-terminal region of Paramyxovirinae phosphopr
      0.032   14.2   0.2       0.27   11.3   0.0    2.0  2  Laminin_II     Laminin Domain II
       0.25   11.2   1.6       0.56   10.1   1.6    1.6  1  DUF919         Nucleopolyhedrovirus protein of unknown functi


Domain annotation for each model (and alignments):
>> Soyouz_module  N-terminal region of Paramyxovirinae phosphoprotein (P)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   9.3e-05      0.56       8      30 ..      43      65 ..      37      69 .. 0.86
   2 ?    2.0   0.3      0.03   1.8e+02      17      39 ..      77      99 ..      75     101 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 9.3e-05
  Soyouz_module  8 eIaeLlelgldvIesiqkaqekp 30
                   +I+ Lle  +++Ies+qk ++ +
     KHJ33522.1 43 AIERLLEEAIEIIESLQKPKTYS 65
                   89***************987765 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.03
  Soyouz_module 17 ldvIesiqkaqekpqkTlGkSaI 39
                   +++ ++iq+ + +++++ G   +
     KHJ33522.1 77 NKILQEIQSIKATISQSHGLARV 99
                   5899*************998766 PP

>> Laminin_II  Laminin Domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   4.4e-05      0.27      50     104 ..      33      95 ..      12     100 .. 0.89
   2 ?    1.0   0.0     0.068   4.1e+02      69     111 ..     121     159 ..     111     181 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 4.4e-05
                 XXXXXXXXXXXXXXX--TTTTTGGGHHHHHHHHHH...........HHHHHHHHHHHHHHHHH CS
  Laminin_II  50 ankairdArrsvkkLeklapqLldklkelkqleeasss........lsdniseikelIaqARk 104
                 a ka  dA++++  L ++a ++++ l++ k+ ++ s++        + ++i+ ik+ I+q   
  KHJ33522.1  33 ADKAFPDAGTAIERLLEEAIEIIESLQKPKTYSKSSHAektptmnkILQEIQSIKATISQSHG 95 
                 568899**********************9999998888899******************9765 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.068
                 TTTGGGHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHH.T--- CS
  Laminin_II  69 pqLldklkelkqleeassslsdniseikelIaqARkaAn.kikv 111
                 +++++k +e+ +l+++   l + i  +ke +  AR +An ++kv
  KHJ33522.1 121 QDIEEK-REIAKLSSE--ELVKRIG-LKEVV-GARHVANgQVKV 159
                 334444.444444333..2333333.46655.689999834444 PP

>> DUF919  Nucleopolyhedrovirus protein of unknown function (DUF919)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.6   9.4e-05      0.56      16      49 ..      59      92 ..      45      94 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 9.4e-05
      DUF919 16 aKrkltiksqHfErlkkitKnpkElqdlekklnk 49
                +K k + ks+H E+   + K  +E+q +  ++ +
  KHJ33522.1 59 QKPKTYSKSSHAEKTPTMNKILQEIQSIKATISQ 92
                5778889*********************988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       962  (0.0536561); expected 358.6 (0.02)
Passed bias filter:                      679  (0.0378716); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.35
# Mc/sec: 1625.43
//
Query:       KHJ33523.1  [L=203]
Description: hypothetical protein EV44_g3768 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1720.47
//
Query:       KHJ33524.1  [L=1145]
Description: putative dna damage-binding protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   2.7e-110  369.3   0.0   5.5e-110  368.3   0.0    1.5  1  MMS1_N       Mono-functional DNA-alkylating methyl methanesul
    9.4e-67  225.6   0.3    3.2e-66  223.9   0.1    2.0  2  CPSF_A       CPSF A subunit region
  ------ inclusion threshold ------
      0.015   15.6   0.0       0.27   11.6   0.0    3.3  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
      0.068   13.7   0.0         42    4.8   0.0    3.7  3  PQQ_3        PQQ-like domain
        0.1   12.3   0.0       0.22   11.3   0.0    1.4  1  T6SS-SciN    Type VI secretion lipoprotein, VasD, EvfM, TssJ,
       0.21   10.7   0.6       0.56    9.3   0.0    2.0  3  Zfx_Zfy_act  Zfx / Zfy transcription activation region


Domain annotation for each model (and alignments):
>> MMS1_N  Mono-functional DNA-alkylating methyl methanesulfonate N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  368.3   0.0  1.9e-113  5.5e-110       1     487 [.      73     579 ..      73     581 .. 0.91

  Alignments for each domain:
  == domain 1  score: 368.3 bits;  conditional E-value: 1.9e-113
      MMS1_N   1 DlLvvgsdsgelvflsynpeknqfetvhshetlgksgsrrsqpGqylavDPkgraiavsayekvflvyslkkkeilnrealllssplearksegvilsm 99 
                 D+L++g+ ++ ++++++n+e +++etv+  e+l++s++r+sq+ + ++vDP+g +++++++e+v++++++ k ++ + + + l+++ ++r+se+ ++++
  KHJ33524.1  73 DHLFIGTLRFSYFTVAWNSELKKLETVNLFENLSDSHMRESQSRDGCLVDPTGQYVMLELFEGVINLIKVTKPRKGR-GDDYLDKAEQIRLSELKVRAS 170
                 9*******************************************************************998865555.88888**************** PP

      MMS1_N 100 vFldpgykeednpiialleqdrrg.kteltlyewdlglnlvrkisktsepkk.......nldsganlLiplpk...p................ggvlVc 171
                 +Fl +++k   +p+iall+++ ++ +++l++y++   +++  +  +++   k        ld + ++Lip+pk                    gg++V+
  KHJ33524.1 171 TFLFTETK---QPKIALLYSEGKDgNVRLVTYQIVDDKGHYSS-FNPK---KdreneldGLDFSCSHLIPVPKgdrGqkrymvrnsavpkallGGIIVV 262
                 *******6...6*******655544899999999988888877.3332...234578998899999*******665056777788888999999***** PP

      MMS1_N 172 getiitykdildqedirkkswarPrrekatnfvawekldsfffllatedGdLylleiekdedsgkvvtsislkyfdtvsvasalvilksgfLfvasefG 270
                 +e+ +ty d+      +++ +++ ++e +++fvawekld+ ++lla+e+ +L+ l+i    d g +v ++++++++++ +as +v l +g +f+as+ G
  KHJ33524.1 263 SESNMTYLDDE-----SNAVIKYNLEE-PSIFVAWEKLDGLNYLLADEYARLFALTI--LVD-GPEVVGMKIRKLGKTTKASLMVLLSEGLVFIASHEG 352
                 *******9993.....44456678888.999**************************..666.589********************************* PP

      MMS1_N 271 dgqlyqieargeddknleliqtldNlaPilDfkvv.......kes.dlasegqdqiytcsGagkrgsLrelRsGieveelavseepgspitgvWtlkls 361
                 d+ql++++  +e +  ++liqt++N++PilDf+v+       +++ + +s+gq q++t+sGa++ gs+r++RsG+++e+ +++ e+++++tg+++lk++
  KHJ33524.1 353 DSQLVKVDLNSEHE-AIVLIQTFPNIGPILDFAVMdigglegENKlNDYSSGQVQLVTGSGANDCGSVRSVRSGVGLEDEGIL-ENLQGVTGIFSLKSH 449
                 **********9998.********************9998754333988**********************************8.55599********99 PP

      MMS1_N 362 sedeyddylvlSfvneTlvlsidgdgeveevtedsglllsvpTLaagnlgdgslvQVtpngirliradk...rvsewkppngksiiaaaangeqllval 457
                 +e+   d+l +S++ eT+v++++++g++ee + ++ ++l ++TL+a n+ +g+ +QVtp++++l    +      ew+pp+g++i+a++ n e+ll+al
  KHJ33524.1 450 QESRIMDILMISMPVETRVFEFSSEGSIEEAHYFKDFNLEETTLLAMNTINGQELQVTPSSVILAGEASkrlKSAEWRPPEGQQITAVSGNFENLLLAL 548
                 999999*************************8799***************************9888777875555************************ PP

      MMS1_N 458 sgrelvyfel.dlieevekkdleslsevscl 487
                 +g+ lv++++  ++ ev+ ++++s ++v+c+
  KHJ33524.1 549 NGTILVSLDIrYELHEVATREISSGDQVACI 579
                 **********6699999*****99******9 PP

>> CPSF_A  CPSF A subunit region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.1   3.2e+03      67     137 ..     689     732 ..     653     751 .. 0.52
   2 !  223.9   0.1   1.1e-69   3.2e-66       7     322 .]     797    1114 ..     791    1114 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.1
                 EEEEEEE-.....SS--EEEEEEEEEEEES----EEEETTEEEEE-SSEEEEEEE-TTS-EEEEEEEE-SS-EEEE CS
      CPSF_A  67 lvfeiiev.....petnrkLklvhkeevkgavtalaefqGrllvgvgqkvrvydlgedktLlrkafldtqlyvvsl 137
                  +f+ +e+     ++   + +++++  + + v +++ f                             d+++y+ ++
  KHJ33524.1 689 NIFATSEHpsliyGS---EGRIIYSAVTADNVISVCSF-----------------------------DNKVYADTI 732
                 555555544433322...33344444444444444444.............................444443333 PP

  == domain 2  score: 223.9 bits;  conditional E-value: 1.1e-69
                  E-T..TT-E.EEEE--T.TEEEEEEEE--B-SSTTT---B--EEEEEEE---SSS--E.EEEEEEEEEE-SS--EEEEEEEEEEEES----EEEETT CS
      CPSF_A    7 vdpiskeei.dsleLee.nEavlsvksvelessettkekkellvVGtafnlgedpaarsGrilvfeiievpetnrkLklvhkeevkgavtalaefqG 101 
                   + + + ++ +++ L++ +E +++v+  el+ s+t +  +e+++VGt+f++  + ++r Gril+f i++    +r+  l+++ ++k a++ +a ++G
  KHJ33524.1  797 AEDVLFGQVgREFLLDKsEEVIECVIQSELHTSHT-NSLAERFIVGTSFLENNESNER-GRILIFGIDQ----SRSPYLITSLNLKCACRRVAILNG 887 
                  555566667689999985777889*******8877.556****************999.**********....58********************** PP

                  EEEEE-SSEEEEEEE-TTS....-EEEEEEEE-SS-EEEEEEETTEEEEEESSS-EEEEEE-S.....SS--EEEEEEESS---EEEEEEE--SSSE CS
      CPSF_A  102 rllvgvgqkvrvydlgedk....tLlrkafldtqlyvvslkvlgnriivgDlmkSvtfveyde.....enyklilfardtqkrwvtaaeflvdgedt 189 
                  ++++++ ++v++y + e++     L + + +++++++++l    n+i+v+Dl+kS++++ey+       + +l+++ar++++ w+ta+ +l ++ ++
  KHJ33524.1  888 HIVAALIKTVVIYSYHETTtnsaYLTKICAYRCSTCPIDLAINDNIIAVADLQKSLVLLEYQPakkegNPDTLVEIARHYHSYWATAVSHL-ED-SS 982 
                  ****************99988899**************************************9999998999*******************.77.6* PP

                  EEEEETTSEEEEEE--TTSGGGTTTT.EEEEEEEEE-SS----E...EEEE.SSS--S-EEEEEE-TTS-EEEEEE.--HHHHHHHHHHHHHHHHHS CS
      CPSF_A  190 vlvaDkfgnlfvlrydpeasessdgdprleeraefhlgeivtslrkgslvpgeaesssspqllyatldGsigllvPliseeeyrrlqaLqqqLrkel 286 
                  +l +D++gnl++l ++ e  +  ++++rle + efhlge+v++++k+++ p+ +++++ p++++at +Gsi+ll   i  +++++l +Lq+++++++
  KHJ33524.1  983 YLESDQEGNLIILARNMEGVTL-EDRRRLELTGEFHLGEMVNRMQKIQVKPT-FNAVIIPRAFLATTEGSIYLLST-IAPSAQDLLIRLQSSIAANI 1076
                  ****************765555.5555*********************7666.78889**************6655.******************** PP

                  --SSS--HHHHS---....----.---EEHHHHHHHHH CS
      CPSF_A  287 khlgGldhrafRsyysp..kseevkgviDgdllerfld 322 
                  k+lg ++++++Rs+ ++  ++ e+ ++iDg+l+erfld
  KHJ33524.1 1077 KTLGNIEFNSYRSFLNMdrEASEPYRFIDGELIERFLD 1114
                  ***************99644444*************96 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.8   8.3e+03      40      81 ..     324     364 ..     307     371 .. 0.68
   2 ?   -3.3   0.0         4   1.2e+04      36      78 ..     516     558 ..     494     578 .. 0.69
   3 ?   -2.8   0.0       2.7   8.1e+03      47      66 ..     636     655 ..     626     660 .. 0.78
   4 ?   11.6   0.0   8.9e-05      0.27      12      59 ..     733     780 ..     698     790 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.8
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  ++r+L  k     L+v  s+g v + + e    + +++ +se
   KHJ33524.1 324 KIRKLG-KTTKASLMVLLSEGLVFIASHEGDSQLVKVDLNSE 364
                  444444.33445688889999999998888887777777766 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 4
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                  + +++ +s +W+p +     a+s +  +ll a +g+++ sl++
   KHJ33524.1 516 EASKRLKSAEWRPPEGQQITAVSGNFENLLLALNGTILVSLDI 558
                  5556667777887665555666666666666777777666655 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 2.7
  ANAPC4_WD40  47 kpdgklLavaysdgevrlld 66 
                  + +g  L va++dg v  ++
   KHJ33524.1 636 NISGPTLFVAMEDGIVLTFK 655
                  6789999*******997665 PP

  == domain 4  score: 11.6 bits;  conditional E-value: 8.9e-05
  ANAPC4_WD40  12 latedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysd 59 
                  ++ +++e+ ++R++ qr  ++ +   + +vr +a++p++++L  ++ +
   KHJ33524.1 733 IVATEEEVKISRIDTQRRTHIRTLPMGVTVRRIAYSPKERVLGLGCIK 780
                  4567899**************999*******************99976 PP

>> PQQ_3  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.014        42      15      39 ..     334     362 ..     325     363 .. 0.79
   2 ?   -1.1   0.0         1     3e+03      18      31 ..     636     649 ..     622     652 .. 0.80
   3 ?    3.8   0.1     0.028        85      11      35 ..     705     729 ..     701     729 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.014
       PQQ_3  15 ssp..avdgglvyvgtg..dGtlyAlDae 39 
                 +s+  ++++glv+++++  d  l+ +D +
  KHJ33524.1 334 ASLmvLLSEGLVFIASHegDSQLVKVDLN 362
                 45555889*********999999999975 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1
       PQQ_3  18 avdgglvyvgtgdG 31 
                  ++g +++v+ +dG
  KHJ33524.1 636 NISGPTLFVAMEDG 649
                 68899999998887 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.028
       PQQ_3  11 gpvnsspavdgglvyvgtgdGtlyA 35 
                 g++ +s++++++++ v + d+++yA
  KHJ33524.1 705 GRIIYSAVTADNVISVCSFDNKVYA 729
                 7999********************9 PP

>> T6SS-SciN  Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   7.3e-05      0.22      22      69 ..     462     510 ..     458     517 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 7.3e-05
                 --EEEEEEEES--HHHHHS-HHHHHHS.HHHHHGGGEEEEEEEEE-TT- CS
   T6SS-SciN  22 sPvvvrvyqLkddsaFeqadffslqdd.dkeaLgadlvavkevvlrPge 69 
                  Pv+ rv++ +++ + e+a +f+ ++  +++ L+ + ++ +e++++P  
  KHJ33524.1 462 MPVETRVFEFSSEGSIEEAHYFKDFNLeETTLLAMNTINGQELQVTPSS 510
                 69*******************888888688999**************75 PP

>> Zfx_Zfy_act  Zfx / Zfy transcription activation region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.4     4e+03       5      34 ..     563     590 ..     561     592 .. 0.85
   2 ?   -2.9   0.0      0.95   2.8e+03     234     260 ..     714     741 ..     700     759 .. 0.67
   3 ?    9.3   0.0   0.00019      0.56      13      79 ..     784     850 ..     778     900 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.4
  Zfx_Zfy_act   5 edveasdileeedvstesviipeqvLeaev 34 
                   +v + +i + ++v+   +++p+q L+  v
   KHJ33524.1 563 HEVATREISSGDQVA--CIFVPDQCLGIGV 590
                  578999999999999..9******998755 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.95
  Zfx_Zfy_act 234 ededlnvaeiadevymevivg.eeeaav 260
                   d+ ++v +++++vy + i+   ee+ +
   KHJ33524.1 714 ADNVISVCSFDNKVYADTIIVaTEEEVK 741
                  4567788889999999876540444433 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00019
  Zfx_Zfy_act  13 leeedvstesviipeqvLeaevaieesLdaahltvpddvLtsdl.isesvslpeqvlvaelvsesevg 79 
                  + +++ ++ s +i+e+vL  +v+ e  Ld+ + +v + v++s+l +s+++sl+e+++v  +  e++ +
   KHJ33524.1 784 VRNQETVSCSFVIAEDVLFGQVGREFLLDK-SEEVIECVIQSELhTSHTNSLAERFIVGTSFLENNES 850
                  445555558999****************99.8899999******556788******999886655533 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       349  (0.0194657); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.75u 0.26s 00:00:01.01 Elapsed: 00:00:00.45
# Mc/sec: 7634.33
//
Query:       KHJ33525.1  [L=353]
Description: putative 3-hydroxyisobutyrate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.7e-33  113.6   0.0    1.5e-32  113.0   0.0    1.3  1  NAD_binding_2    NAD binding domain of 6-phosphogluconate deh
    2.3e-23   82.7   0.0    3.9e-23   82.0   0.0    1.3  1  NAD_binding_11   NAD-binding of NADP-dependent 3-hydroxyisobu
  ------ inclusion threshold ------
      0.044   14.4   0.0      0.096   13.3   0.0    1.6  1  F420_oxidored    NADP oxidoreductase coenzyme F420-dependent
      0.066   12.1   0.0        0.1   11.5   0.0    1.2  1  OCD_Mu_crystall  Ornithine cyclodeaminase/mu-crystallin famil
       0.14   12.4   0.0       0.27   11.5   0.0    1.5  1  TrkA_N           TrkA-N domain


Domain annotation for each model (and alignments):
>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.0   0.0   4.2e-36   1.5e-32       1     158 []      35     219 ..      35     219 .. 0.92

  Alignments for each domain:
  == domain 1  score: 113.0 bits;  conditional E-value: 4.2e-36
                    EEEEE--SHHHHHHHHHH...HHTT-EEEEE-SSHHHHHHHHHTT........EEE-SSHHHHHHHCSEEEE-SSSHHHHHHHHHSHCCC-..... CS
  NAD_binding_2   1 kigfiGlGvMGsnmalnl...lkagykvavynrtkekveelvaeg........akaaesieelvasldvvitmvkagkavdevieglleal..... 80 
                    ++g+iGlG+MG nma+nl   l+a  +++++++++e +++++ e         +  a +++e++++ +v+it+++++++v+ev+++++++      
     KHJ33525.1  35 NYGLIGLGQMGFNMAKNLrsnLSASDSLYIFDVNHEPMNRFIRETkdfkngpiVYQAINVSEAADNSKVIITVLPDSPPVKEVYQQIFSKQplyhs 130
                    58****************888899******************9988999999988899999*************************8877778899 PP

                    ........-TT-EEEE-S---HHHHHHHHHHHHHTT...-EEEEEEEESHHHHHHHT-EEEEEEE-HHHHHHHHHHHHHHEE.EEEEE-E CS
  NAD_binding_2  81 ........kkgdilidgstsspedtrelakelkekg...lkfldaPVSGGeegAekGtLsimvGGseeafervkpvleaiga.kvthviG 158
                             +++++id+st++p +++e+a+ +++++     ++daP+SGG+  A + +L++m+G++++ +++++p+l+++g  +v+h+ G
     KHJ33525.1 131 nnsnnkgkPQNRLFIDCSTIDPITSKEIAQLAQQREegtSYYVDAPISGGVIAAMQSSLTFMLGCPDNLVSQITPILQKMGGkQVIHC-G 219
                    999999988999*****************9998887666789**************************************98456655.5 PP

>> NAD_binding_11  NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.0   0.0   1.1e-26   3.9e-23       5     122 .]     226     350 ..     223     350 .. 0.91

  Alignments for each domain:
  == domain 1  score: 82.0 bits;  conditional E-value: 1.1e-26
  NAD_binding_11   5 avKlvnnlllainlaaasEalvlaekaGldpekvlevinassgrsna......lenklpqrvlsrdfdpgFaldlmlKDlglalelareagaplp 93 
                     + Kl+nn+llai+ +a++Ea+ l+ k Gld+  +   in+s+gr++       ++ ++ ++++srd+  gF+l+lm KDl+la+  a+e+g++l 
      KHJ33525.1 226 VGKLANNYLLAISNIATAEAMRLGMKWGLDAGLLSHLINQSTGRCWPsavnnpVKGVVAHAPASRDYVGGFSLGLMKKDLSLAIISAKEVGIQLD 320
                     56*******************************************984444444666999*********************************** PP

  NAD_binding_11  94 llalaeqlyaaaaa.egggdaDhsaivrll 122
                     l++ a+++y+ a+  e  +++D+s i+r+l
      KHJ33525.1 321 LAERAREVYEDADTfENCKGRDFSVIYRYL 350
                     **********99883555889****99986 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.7e-05     0.096       2      70 ..      36     109 ..      35     130 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.7e-05
                    EEEETTSHHHHHHHHHHHHTTS-GGCEEEEEESSCCCHHHHHHHHC......-EEECECHHHHHHH-SEEEE-S- CS
  F420_oxidored   2 igiiGaGnmgealasgllaagaqpheivvansrnpekaeelaeelg......vkvtavdneeaaeeadvvvlavk 70 
                     g+iG G+mg+ +a++l ++  +  ++++  + n e ++ + +e +      +  +a + +eaa++++v++  ++
     KHJ33525.1  36 YGLIGLGQMGFNMAKNLRSNLSASDSLYIF-DVNHEPMNRFIRETKdfkngpIVYQAINVSEAADNSKVIITVLP 109
                    699************999886688888866.7777777777777777888997777778999**99999886555 PP

>> OCD_Mu_crystall  Ornithine cyclodeaminase/mu-crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   2.8e-05       0.1     132     207 ..      36     114 ..      28     119 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.8e-05
                      EEEE--SHHHHHHHHHHCCCS-.-SEEEEE-SSHHHHHHHHHHCCS...CTT-EEECSCHHHHTTSSEEEE----SS-S CS
  OCD_Mu_crystall 132 laiiGaGvqaetqlealkavld.ikevriydrdeeaaekfaenlqef..efevsackseeeavegadivvtvTaakapi 207
                       ++iG G +    ++ l+  l+  + + i+d+++e +++f+++ + f  +  v  + ++ ea+++  +++tv ++  p+
       KHJ33525.1  36 YGLIGLGQMGFNMAKNLRSNLSaSDSLYIFDVNHEPMNRFIRETKDFknGPIVYQAINVSEAADNSKVIITVLPDSPPV 114
                      689***************99997899********************544556778899**************9998776 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   7.6e-05      0.27       3      72 ..      38     110 ..      36     117 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 7.6e-05
                 EES-SHHHHHHHHHHHHTT...EEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGGESEEEE-SSS CS
      TrkA_N   3 iiGlGrvGrslaeeLsegg...kdvvvidkdeerveelreeglevvvgdatdeevLeeagiekadaviaatgd 72 
                 +iGlG++G ++a++L+++    ++ ++ d ++e ++++ +e  ++ +g    +++  +  +++ +++i++++d
  KHJ33525.1  38 LIGLGQMGFNMAKNLRSNLsasDSLYIFDVNHEPMNRFIRETKDFKNGPIVYQAINVSEAADNSKVIITVLPD 110
                 79***************7669977**************99998888888888888888888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (353 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2692.65
//
Query:       KHJ33526.1  [L=459]
Description: putative pre-mrna cleavage complex ii protein clp1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.8e-38  131.6   0.0    5.7e-38  130.6   0.0    1.5  1  CLP1_P       mRNA cleavage and polyadenylation factor CLP1 P-
    3.2e-35  120.2   0.4    5.3e-34  116.3   0.2    2.3  2  CLP1_N       N-terminal beta-sandwich domain of polyadenylati
    1.5e-30  106.0   0.0    2.9e-30  105.1   0.0    1.5  1  Clp1         Pre-mRNA cleavage complex II protein Clp1
    5.1e-05   23.3   0.1      0.013   15.6   0.0    2.4  2  MMR_HSR1     50S ribosome-binding GTPase
     0.0011   18.4   0.0     0.0043   16.5   0.0    1.8  2  TniB         Bacterial TniB protein
     0.0012   18.9   0.2       0.39   10.8   0.0    2.6  3  Dynamin_N    Dynamin family
     0.0042   16.8   0.0       0.47   10.2   0.0    2.3  2  PduV-EutP    Ethanolamine utilisation - propanediol utilisati
     0.0068   16.3   0.1        1.8    8.5   0.0    2.4  2  RsgA_GTPase  RsgA GTPase
     0.0069   16.1   0.0      0.012   15.3   0.0    1.4  1  AAA_24       AAA domain
  ------ inclusion threshold ------
      0.013   15.3   0.0      0.062   13.1   0.0    2.0  2  ATP_bind_1   Conserved hypothetical ATP binding protein
      0.022   15.1   0.0       0.05   14.0   0.0    1.6  1  AAA_16       AAA ATPase domain
      0.025   14.0   0.0       0.12   11.8   0.0    2.2  2  SRPRB        Signal recognition particle receptor beta subuni
      0.077   13.5   0.0       0.15   12.6   0.0    1.4  1  ABC_tran     ABC transporter
       0.13   11.1   0.0       0.21   10.4   0.0    1.3  1  AAA_35       AAA-like domain


Domain annotation for each model (and alignments):
>> CLP1_P  mRNA cleavage and polyadenylation factor CLP1 P-loop
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.6   0.0   4.4e-41   5.7e-38       1     187 [.     131     336 ..     131     337 .. 0.95

  Alignments for each domain:
  == domain 1  score: 130.6 bits;  conditional E-value: 4.4e-41
      CLP1_P   1 GpkdsGKSTlarlLlNyalrkgrkpvyvDlDvGqseispPgtislalverpi...........dveegfsldaplvyffGdtspsdnpslylalvkela 88 
                 Gp+++GK++l+++L  yalr+grkp+++++D   + +s+Pgt+ +++  + +           ++ + ++ + pl y++G +sp+dn++ly+ l+ +la
  KHJ33526.1 131 GPSNAGKTSLVKILTAYALRMGRKPMVINTDSKEGLLSIPGTMTAVPFASILdveqgwgssstSTTSPVPAKLPLCYYYGLESPEDNTKLYKPLLTRLA 229
                 99**********************************************9999889999998777777788899************************** PP

      CLP1_P  89 reveekleenkkakasgliIntpGwvk.gl.gaellleliealepdvvvvldqeellnelkrdlp......lskvkvvklpkspgvvqrsreerrelre 179
                  ++++++  + +++ sg+iI+tpG ++ g  g++l+ ++++ + +++++vl++e+l +el+r +       +++++++kl+ks+g v+r++e  r+ re
  KHJ33526.1 230 LAATSRMTDDTDVNVSGMIIDTPGVISqGKgGYDLISHIVSEFSVNIILVLGSERLHSELHRRFSslktntGESITLIKLDKSGGCVDRDEEYLRQSRE 328
                 **************************843348******************************998877777899************************* PP

      CLP1_P 180 erireYFy 187
                  +i+eYF 
  KHJ33526.1 329 CSIKEYFF 336
                 *******6 PP

>> CLP1_N  N-terminal beta-sandwich domain of polyadenylation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.3   0.2   4.1e-37   5.3e-34       1      92 []      28     117 ..      28     117 .. 0.98
   2 ?    1.7   0.0      0.23     3e+02      19      43 ..     365     389 ..     349     439 .. 0.75

  Alignments for each domain:
  == domain 1  score: 116.3 bits;  conditional E-value: 4.1e-37
                 EE-TTEEEEEEE-SSS-EEEEEEEE--EETTEE--TT-EEEE-TT-EEEEEESS-EEEEEES-EEEEEEES--SHHHHHHHHHHHHHHHHHH CS
      CLP1_N   1 eLekeselrfeveskeklkikllsGtaEifGtELaknkeytfskgtkfaiftwegcklevkgeaeseyvseetpmksylnlhlaLeklRqka 92 
                 e++++se+rf+++ ++++++++lsGtaEifGtE+a n+ y+f+ g+k++iftw+gc++evkge+e ey++eetpm +y+n+h+aLeklR+ka
  KHJ33526.1  28 EIQANSEWRFDIAVDQNIQVRILSGTAEIFGTEIALNHIYKFQ-GIKSSIFTWHGCRIEVKGECE-EYTAEETPMIQYANTHFALEKLREKA 117
                 6899***************************************.9*******************9.8**********************986 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.23
                 EEEEEEE--EETTEE--TT-EEEE- CS
      CLP1_N  19 kikllsGtaEifGtELaknkeytfs 43 
                 ++  + G  Eif +EL ++ e ++s
  KHJ33526.1 365 SLSFMPGGEEIFDQELYEKIEPNLS 389
                 556677999*********9997776 PP

>> Clp1  Pre-mRNA cleavage complex II protein Clp1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.1   0.0   2.3e-33   2.9e-30       1     117 []     343     452 ..     343     452 .. 0.95

  Alignments for each domain:
  == domain 1  score: 105.1 bits;  conditional E-value: 2.3e-33
                 ---EEEEEETTS-EEEEE-.------------.------TS-EEEE-.--GGGTTEEEEEESSSS....TCCTT--EEEEEEEEEEETTTTEEEEEESS CS
        Clp1   1 LsPysitvdfddlsiyrvgeeeaapssalPigeeekeseetklekveepsselqnsilavsqasakdseeevldssvlGFvyVtevdeekkkltvLsPv 99 
                 LsP++ +++fd++ iyr+  +e  + s++P g  e+  +++ +ek+e p+ ++ n+ilav++as  ds+e+++d+sv+GFvyV+ev+++k kl+vL+P+
  KHJ33526.1 343 LSPHTLQINFDEVFIYRI--KEINSLSFMPGG--EEIFDQELYEKIE-PNLSMMNCILAVMYASGADSQETIRDASVMGFVYVSEVNQKKGKLKVLAPM 436
                 8****************8..588899******..55677889****6.78************************************************* PP

                 SS.-S-SEEEEEEEE--- CS
        Clp1 100 pgrlpskalilgslkwpe 117
                 ++++ +++li+gs  wpe
  KHJ33526.1 437 NSKITERPLIWGS--WPE 452
                 *************..998 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0     1e-05     0.013       1      30 [.     126     155 ..     126     186 .. 0.87
   2 ?    5.4   0.0     0.015        19      48      82 ..     246     280 ..     218     326 .. 0.65

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1e-05
                 EEEEEESTTSSHHHHHHHHHTSTEEESSST CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltgekaivsdkp 30 
                 +v++vG +N+GK++L++ lt  + ++++kp
  KHJ33526.1 126 RVLVVGPSNAGKTSLVKILTAYALRMGRKP 155
                 699****************98766666666 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.015
                 EEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEE CS
    MMR_HSR1  48 ielvDtpGliegaseekglgkaflaleeadlillv 82 
                   ++DtpG+i++ + + +l  ++ +  ++++il++
  KHJ33526.1 246 GMIIDTPGVISQGKGGYDLISHIVSEFSVNIILVL 280
                 489*****887444444566555553333333333 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   3.4e-06    0.0043       8      53 ..      98     142 ..      93     154 .. 0.87
   2 ?   -1.6   0.0       1.2   1.5e+03      80     102 ..     214     236 ..     196     247 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 3.4e-06
        TniB   8 drwigyprakeilerLeeLleypkrkrmpnlllvGdsnnGKtmive 53 
                    i+y++ + +le+L+e  e  +++  p +l+vG+sn GKt++v+
  KHJ33526.1  98 TPMIQYANTHFALEKLREKAEESSNDG-PRVLVVGPSNAGKTSLVK 142
                 56799***********99988877776.9**************997 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.2
        TniB  80 kpdekrlyaaiLealgaplkara 102
                   d+ +ly+ +L++l   + +r 
  KHJ33526.1 214 PEDNTKLYKPLLTRLALAATSRM 236
                 457889*******9988765544 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0     0.013        17       1      19 [.     127     145 ..     127     158 .. 0.83
   2 !   10.8   0.0   0.00031      0.39      97     139 ..     241     283 ..     213     309 .. 0.74
   3 ?   -3.5   0.0       7.2   9.2e+03     128     140 ..     390     402 ..     373     411 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.013
                 EEEEEBTTTTHHHHHHHHH CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLl 19 
                 ++vvG  ++GK+S++  L+
  KHJ33526.1 127 VLVVGPSNAGKTSLVKILT 145
                 78************98776 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00031
                 ETTS-SEEEEE---B-SSSGTTSHHHHHHH.STTEEEEEEEETT CS
   Dynamin_N  97 sllvkgltlvDlPGldsvnkrdqelvkeyi.kkadiilavtsan 139
                 + +v+g+ ++D+PG++s+ k+  +l+ +++ + +  i++v+ ++
  KHJ33526.1 241 DVNVSGM-IIDTPGVISQGKGGYDLISHIVsEFSVNIILVLGSE 283
                 4555666.**********************54444444444443 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 7.2
                 TTEEEEEEEETTS CS
   Dynamin_N 128 kadiilavtsanh 140
                   + ilav++a+ 
  KHJ33526.1 390 MMNCILAVMYASG 402
                 5577899999875 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00036      0.47       3      28 ..     126     151 ..     125     175 .. 0.82
   2 ?    4.1   0.0     0.027        35      34      70 ..     242     279 ..     230     324 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00036
   PduV-EutP   3 killiGkvgsGKttLtqalkgeelkY 28 
                 ++l++G++++GKt+L + l+  +l+ 
  KHJ33526.1 126 RVLVVGPSNAGKTSLVKILTAYALRM 151
                 79****************99887764 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.027
   PduV-EutP  34 iefsdeviDtPGeylenrklysalivtsaeadv.ialv 70 
                 +++s ++iDtPG   + +  y  +  +  e +v i lv
  KHJ33526.1 242 VNVSGMIIDTPGVISQGKGGYDLISHIVSEFSVnIILV 279
                 788999******99999999998887777766523333 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0    0.0014       1.8      79     121 ..     100     146 ..      82     165 .. 0.67
   2 ?    5.5   0.1     0.012        15     140     162 ..     233     255 ..     231     259 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0014
                  EEE--TTTHTTHHHHHHHCTT.....SEEEEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase  79 vllvsaktkegleelkellkd.....ktsvlvGqSGvGKStLinallp 121
                  ++   a+t+ +le+l+e+ ++       +++vG+S +GK++L++ l+ 
   KHJ33526.1 100 MIQY-ANTHFALEKLREKAEEssndgPRVLVVGPSNAGKTSLVKILTA 146
                  4444.444556666665554411012457899***********99976 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.012
                  ---SEEEEEETTTEEEESS-SSS CS
  RsgA_GTPase 140 TTtavellelaegglliDtPGfr 162
                  T++ +   +++ +g++iDtPG+ 
   KHJ33526.1 233 TSRMTDDTDVNVSGMIIDTPGVI 255
                  6677777788899********85 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   9.4e-06     0.012       3      38 ..     125     169 ..     123     188 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 9.4e-06
      AAA_24   3 lkiliyGpsgiGKTtlakel.......gpkplfidtek..Glksl 38 
                  ++l++Gps +GKT+l+k l       g kp +i+t+   Gl s+
  KHJ33526.1 125 PRVLVVGPSNAGKTSLVKILtayalrmGRKPMVINTDSkeGLLSI 169
                 699****************999**************975566665 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   4.9e-05     0.062       1      33 [.     129     161 ..     129     168 .. 0.96
   2 ?   -1.2   0.0       1.1   1.4e+03      94     137 ..     247     287 ..     230     299 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.9e-05
  ATP_bind_1   1 vvGpaGsGKttfvgalseilelrgrsvavvNLD 33 
                 vvGp  +GKt++v+ l+ ++   gr++ v+N D
  KHJ33526.1 129 VVGPSNAGKTSLVKILTAYALRMGRKPMVINTD 161
                 89*****************************99 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.1
  ATP_bind_1  94 llfDtPGQielfthseslakiveeLesefalvvvyLvDsqrltd 137
                 +++DtPG i      + +  ++ ++ sef++ ++ ++ s+rl +
  KHJ33526.1 247 MIIDTPGVI---SQGKGGYDLISHIVSEFSVNIILVLGSERLHS 287
                 799999954...45556666667888888888887777777766 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   3.9e-05      0.05      12      50 ..     113     150 ..     108     186 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.9e-05
      AAA_16  12 LlsalervrsgrpelvllsGesGvGKsslvrellralek 50 
                 L++  e   s++++ vl++G+s  GK+slv+ l  ++ +
  KHJ33526.1 113 LREKAEES-SNDGPRVLVVGPSNAGKTSLVKILTAYALR 150
                 55555533.445589***************988876655 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   9.6e-05      0.12       4      26 ..     125     147 ..     122     164 .. 0.85
   2 ?   -2.2   0.0       1.9   2.4e+03      66      66 ..     264     264 ..     223     298 .. 0.55

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 9.6e-05
                 -EEEEE-STTSSHHHHHHHHHHS CS
       SRPRB   4 pavllvGlsdsGKTslftrLttd 26 
                 p+vl+vG+s++GKTsl + Lt  
  KHJ33526.1 125 PRVLVVGPSNAGKTSLVKILTAY 147
                 89****************99976 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.9
                 H CS
       SRPRB  66 l 66 
                 l
  KHJ33526.1 264 L 264
                 2 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   0.00011      0.15       9      33 ..     122     146 ..     116     164 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 0.00011
                 ETTSEEEEEESTTSSHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   9 kegekvaivGenGaGKStLlkllag 33 
                 + g +v +vG++ aGK++L+k+l+ 
  KHJ33526.1 122 NDGPRVLVVGPSNAGKTSLVKILTA 146
                 67899*****************985 PP

>> AAA_35  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00016      0.21      24      69 ..     117     162 ..     102     169 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00016
      AAA_35  24 yeeiekpGalirikapkkmGKtSLlarilakakqqgyktvsldlql 69 
                  ee +++G  + + +p++ GKtSL++ + a+a + g k ++++ ++
  KHJ33526.1 117 AEESSNDGPRVLVVGPSNAGKTSLVKILTAYALRMGRKPMVINTDS 162
                 5667788999999***********************9999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3244.04
//
Query:       KHJ33527.1  [L=588]
Description: putative argonaute sirna chaperone arc complex subunit arb1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     7e-135  450.2   0.1   1.1e-134  449.7   0.1    1.3  1  Arb1      Argonaute siRNA chaperone (ARC) complex subunit Arb
  ------ inclusion threshold ------
      0.063   13.8   0.2       0.26   11.8   0.0    2.1  2  YxiJ      YxiJ-like protein
       0.13   13.2   7.8       0.78   10.7   7.8    2.1  1  Dscam_C   Down syndrome cell adhesion molecule C terminal


Domain annotation for each model (and alignments):
>> Arb1  Argonaute siRNA chaperone (ARC) complex subunit Arb1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  449.7   0.1  1.8e-138  1.1e-134       4     400 .]     158     560 ..     155     560 .. 0.95

  Alignments for each domain:
  == domain 1  score: 449.7 bits;  conditional E-value: 1.8e-138
        Arb1   4 kkkkgkptGFEeyyadppltpaeyeeekklYdperpfvdRieeaIqryrarRrldserrniFnkYLslGGidttqrqfqGgldkeeleeldkeeiaeat 102
                 k kk+ +tGFEe++ad+p+ p+eyeee +lYd++r f +R++++Iqr+rarR+ld++r+niF+k+L+lGG++t ++qf+Ggld+e le+++++eia+++
  KHJ33527.1 158 KPKKKPVTGFEEFFADAPIRPDEYEEELELYDQTREFKERMQTCIQRFRARRKLDPTRANIFSKFLALGGVETDAKQFNGGLDRELLENSTASEIAAFQ 256
                 5566669******************************************************************************************** PP

        Arb1 103 atdvisedkkddsrfydpddkwevDFegVakgFLSsklpalvgle.eeqvekaidvirnFlnYllqHdVCPEYeddikaArkvCdkAkeElpkiaalla 200
                 atd+i++    + ++yd++dkw+vDFegVakgF+S++lpa++ ++ e q+e+++ vi+ FlnY+l+H VCPEY++d+ aAr++ d+A +El++i+++ +
  KHJ33527.1 257 ATDFIRTYPY-NPKYYDGSDKWVVDFEGVAKGFFSHRLPANFPVDsETQLEDYCMVIKGFLNYVLYHKVCPEYTADVLAARNIVDLAVKELWSIQRIAS 354
                 ********99.89************************************************************************************** PP

        Arb1 201 klPGdFntAcstlfggaykeyseeeswaeeeee.......ekglskekakkvfkaavaalgseeqaeklaekaeekkalavveeeeqglevveielpse 292
                 klPGdFn+A+s+lfgg+yk+ ++  +++ e ++       + g+s+ +a+++f++a+a+ g  eqa++      + +++ ++++e++ +ev+ei+ p++
  KHJ33527.1 355 KLPGDFNKAASILFGGRYKNVWGFGYPEGEDSKnedftftAGGFSQGRAEQIFMTAIAICGGTEQAAQ-----VDCSEIFIMKTEKKFYEVIEIQHPNS 448
                 *******************88888884333333456888899********************996665.....59************************ PP

        Arb1 293 evkeiyeelakkekkk.klkpvGklvvkpvviewenpsaaeedlakeeek.......eveflleedilellfvGmklelevceLncglkfidevldvlp 383
                  + ++y+++ + + k  ++kp+G+++++     w+np+ ++ed ++ee++        + f+le++il+ +f G+kle+ev eLn+g+k+id++  +l+
  KHJ33527.1 449 HIIDQYNRIIDLNCKVgQIKPLGSVKLRY----WKNPGVEQEDCTDEESDsenneldFEWFWLEDEILQDFFLGLKLEVEVKELNIGMKYIDSFVGILC 543
                 ********999665559************....************9998899**998889*************************************** PP

        Arb1 384 sfytflpnelmlgyKeP 400
                 sfyt+lpne+m++yKeP
  KHJ33527.1 544 SFYTYLPNEKMVNYKEP 560
                 ****************9 PP

>> YxiJ  YxiJ-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.4e-05      0.26      40      70 ..     304     332 ..     295     336 .. 0.83
   2 ?   -3.1   0.1       1.8   1.1e+04      14      36 ..     566     588 .]     557     588 .] 0.84

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.4e-05
        YxiJ  40 DfneyfmliagtLsyvlngkeqkipkkqikl 70 
                  +++y+m+i g L+yvl +k    p++  ++
  KHJ33527.1 304 QLEDYCMVIKGFLNYVLYHK--VCPEYTADV 332
                 6899***************9..666666555 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.8
        YxiJ  14 afPsediekleedlkkdftkddc 36 
                 + P+ed e + e+ ++df+ +dc
  KHJ33527.1 566 PAPTEDDETIDEKYHDDFEIEDC 588
                 66999999999999999998887 PP

>> Dscam_C  Down syndrome cell adhesion molecule C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   7.8   0.00013      0.78      43     110 ..      82     152 ..       6     157 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00013
     Dscam_C  43 rsvaslrqlrgngspepplppprnadvssssands.kesneisea.ecdrdqlvnrny.gvsirtmnskdg 110
                  s+++   ++    p+pp+p p + d++  s +d+ k s +i+e  + d dql  ++     +++  +kd+
  KHJ33527.1  82 NSISASGISTPLVIPNPPPPTPATVDIAVKSSDDAlKSSCDIAEViDVDVDQLASKKKkKKKKKNKTTKDD 152
                 34444444444455**************9999887477889*996489****9985540445556666765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1085  (0.0605165); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.45
# Mc/sec: 3935.56
//
Query:       KHJ33528.1  [L=134]
Description: hypothetical protein EV44_g4815 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.08   12.7   0.5       0.18   11.6   0.5    1.6  1  Asp4      Accessory secretory protein Sec Asp4


Domain annotation for each model (and alignments):
>> Asp4  Accessory secretory protein Sec Asp4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.5     1e-05      0.18      11      26 ..      43      58 ..      37      66 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1e-05
        Asp4 11 GrmeslkrrPaekekt 26
                 +mes++rr a kek 
  KHJ33528.1 43 QKMESMRRRDAAKEKK 58
                58************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 999.63
//
Query:       KHJ33529.1  [L=152]
Description: putative stress response rci peptide [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-19   68.1   6.9    7.2e-19   67.7   6.9    1.2  1  Pmp3      Proteolipid membrane potential modulator


Domain annotation for each model (and alignments):
>> Pmp3  Proteolipid membrane potential modulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.7   6.9     4e-23   7.2e-19       1      48 [.       5      53 ..       5      54 .. 0.98

  Alignments for each domain:
  == domain 1  score: 67.7 bits;  conditional E-value: 4e-23
        Pmp3  1 dillillaiilPPlaValksG.csadllinilLtllgylPgviHAfyii 48
                di+l l+ai++PP +V++k+G csad lini+L+ lg +Pg++HA+yii
  KHJ33529.1  5 DIFLGLIAILFPPFPVWVKRGlCSADSLINICLCALGGIPGILHAWYII 53
                89**********************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       413  (0.0230353); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1103.17
//
Query:       KHJ33530.1  [L=86]
Description: hypothetical protein EV44_g3913 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       295  (0.0164538); expected 358.6 (0.02)
Passed bias filter:                      238  (0.0132746); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.24s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 675.53
//
Query:       KHJ33531.1  [L=570]
Description: putative oxidoreductase-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (570 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3990.81
//
Query:       KHJ33532.1  [L=850]
Description: putative snf2 family domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-57  194.5   0.0    3.7e-57  193.6   0.0    1.4  1  SNF2_N      SNF2 family N-terminal domain
    2.1e-55  187.7   1.5    3.6e-55  186.9   0.7    1.8  2  Rad54_N     Rad54 N terminal
    5.2e-15   55.8   0.0    1.4e-14   54.3   0.0    1.8  1  Helicase_C  Helicase conserved C-terminal domain
    1.7e-08   34.7   0.0    2.9e-08   33.9   0.0    1.4  1  ResIII      Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.018   14.2   0.0        0.2   10.8   0.0    2.5  2  HDA2-3      Class II histone deacetylase complex subunits 2 a
       0.14   11.8   0.0       0.34   10.5   0.0    1.7  1  SWI2_SNF2   SWI2/SNF2 ATPase


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.6   0.0   1.2e-60   3.7e-57      52     349 ..     281     571 ..     251     572 .. 0.88

  Alignments for each domain:
  == domain 1  score: 193.6 bits;  conditional E-value: 1.2e-60
                 HHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH.....----------- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxx RF
      SNF2_N  52 kqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkk.....mkkkntkvapk 145
                 +++ +G+i+aDemGLGKT+q+++l++++ +++ +       +   + ++i +P+sl+++W ne+ +++ ++a++ ++ +g+ +     ++ +++ +a  
  KHJ33532.1 281 EEEANGCIMADEMGLGKTLQCITLMWTLLKQSPDPG-----KSTIQKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASkevlqQQLRQWAIASG 374
                 46789*********************6655333322.....34555579*******************************98899998889999999** PP

                 ------EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 146 lladydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkl 244
                  + +  v+i++Y++l+ ++      ++lk+ ++  + +DEgh+lkn++s++ +a++ L+ s+r+il+GTPiqn+l+++++L++f +++ +g++  f+k 
  KHJ33532.1 375 RAVTRPVIIVSYETLRLNV------EELKNTKIGLMLCDEGHRLKNGDSQTFTALNGLNVSRRVILSGTPIQNDLTEYFSLISFANPGLLGTRAEFRKK 467
                 ****************777......9************************************************************************* PP

                 THHHHH............HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH CS
                 xxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 245 lqrpie............aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskske 331
                 ++ pi             ++ +  +++Ll++++++++rr+++ ++k+lP k e+++f++ls+ ++ +Yn         ++ +  +++    k s     
  KHJ33532.1 468 YELPILkgrdaagsekdrEKGDLAIKELLEIVNKFIIRRTNDILSKYLPVKYEHVVFCNLSPFQLGLYN--------LFITSPEIQALLRGKGS----- 553
                 **************99988899999********************************************........33333333333333444..... PP

                 -HHHHHHHHHHHHH---X CS
                 xxxxxxxxxxxxxxxxxx RF
      SNF2_N 332 kilelllelrqacnhpql 349
                 + l+ +  l++ cnhp+l
  KHJ33532.1 554 QPLKAIGLLKKLCNHPDL 571
                 49999999******9987 PP

>> Rad54_N  Rad54 N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.9   0.7   1.2e-58   3.6e-55       4     181 .]      73     239 ..      70     239 .. 0.91
   2 ?   -3.3   0.0       2.9   8.6e+03      85     101 ..     464     480 ..     460     514 .. 0.55

  Alignments for each domain:
  == domain 1  score: 186.9 bits;  conditional E-value: 1.2e-58
     Rad54_N   4 slerLtkpFkvPasaastreserpaRkrrkvvsYagadgeeeeeesdkkeeekeeekrkdalaarklnkfpvfrlkdketvlkksFsvPlkkkkqkeve 102
                 s++rL kpFk+P+sa+ t++s++paRkrrkv +Y+gad  ++++ s+k++++    +++ ala+r++n+fpvf++kdke++++++F+vPl +k+++ ++
  KHJ33532.1  73 STDRLVKPFKCPGSATITSTSNKPARKRRKV-DYSGADDGKDDD-SEKPWTN----EDRLALANRDANRFPVFQVKDKEAIFRQRFAVPLVNKNSTIYN 165
                 689****************************.*****9987766.7899998....9****************************************** PP

     Rad54_N 103 elrppptLGtrkkvilvprpLhDPtdefAIVLYDPTvDdkekeeeeeeeekeeeeeekeekkkkkklphKsLaeiLGik 181
                 + rppptLG+r+++++++++LhDP++efAIVLYDPT D+k+k+ + +++++e++e + +      +++hKsLaeiLGik
  KHJ33532.1 166 PDRPPPTLGLRRGAVFIAKALHDPSGEFAIVLYDPTLDEKSKDLDVAKDNTETKEVKVD-----APIVHKSLAEILGIK 239
                 **************************************766666666655555544444.....389**********96 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.9
     Rad54_N  85 lkksFsvPlkkkkqkev 101
                 ++k++++P+ k  + + 
  KHJ33532.1 464 FRKKYELPILKGRDAAG 480
                 66666666655533332 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.3   0.0   4.7e-18   1.4e-14       6     110 ..     612     721 ..     607     722 .. 0.87

  Alignments for each domain:
  == domain 1  score: 54.3 bits;  conditional E-value: 4.7e-18
                 HHHHH..HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH...TTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHH CS
  Helicase_C   6 llell..kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn...kgesdvLiatdvaerGidipkvnlVinfdlprnvts 99 
                 l ++l   +   ++ki++++n++++l++++ l++++++ +++l+g+++  +r++ +++fn    +e+ +L+++++++ G+++ ++n ++ fd+++n++ 
  KHJ33532.1 612 LDRMLarIRYDTNDKIVLISNYTQTLDMFDRLCRERNYGSLRLDGTMNVTKRQKLVDRFNdpqGNEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPAA 710
                 44454555778999************99777777778***********************88335566******************************* PP

                 HHHHHTTSSST CS
  Helicase_C 100 yiqriGRtgRa 110
                  +q+  R++R 
  KHJ33532.1 711 DQQALARVWRD 721
                 *********96 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   0.0   9.6e-12   2.9e-08       3     170 ..     260     439 ..     258     440 .. 0.78

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 9.6e-12
                 EE-HHHHHHHHHHT........TTSEEE.EEESTTSTHHHHHHHHHHHH-S...........-EEEEESSHHHHHHHHHHGGGGTGG...........G CS
      ResIII   3 elreyQeeaienlleklks..krdkrgl.ikmaTGtGKTlvaaklierllkkgkee......kflflvprkslleqtleefkkflseayke.......i 85 
                  lr++Q+e ++ +   ++   +++ +g+ ++ + G GKTl ++ l++ llk+ +        k+++ +p  sl++ + +e+ k+l +++ +       +
  KHJ33532.1 260 VLRPHQIEGVKFMYRCVTGmiEEEANGCiMADEMGLGKTLQCITLMWTLLKQSPDPgkstiqKAIIACP-SSLVKNWANELVKWLGPDAIQpfaidgkA 357
                 5899999999988877666767777777367799*****************999889999966666555.57888888887666666654456654445 PP

                 EEEESSS-B--..........-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.T..TTHHHHHT---SEEEEEESS-S CS
      ResIII  86 gkkvsgdkkka...kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakk..swreilekfkeavllglTATpe 170
                 +k+v +++ ++    ++++ ++ ++++++++l  +        eel+++++ ++++DE Hrl+  +  ++++ l+ ++ + ++ l++Tp 
  KHJ33532.1 358 SKEVLQQQLRQwaiASGRAVTRPVIIVSYETLRLNV-------EELKNTKIGLMLCDEGHRLKNGDsqTFTA-LNGLNVSRRVILSGTPI 439
                 5555555555599999********************.......999999**************985325554.78888899999999995 PP

>> HDA2-3  Class II histone deacetylase complex subunits 2 and 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.36   1.1e+03     200     236 ..     194     229 ..     191     244 .. 0.78
   2 ?   10.8   0.0   6.5e-05       0.2      89     247 ..     605     746 ..     599     763 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.36
                 EEEE-SST--TTSHHHHHHH----------EEEEEET CS
      HDA2-3 200 liiafDssvdtsspsveslrtqnrkknklpiirlvpi 236
                 +i+  D+++d++s+++   + ++++k+ + +  +++ 
  KHJ33532.1 194 AIVLYDPTLDEKSKDLDVAKDNTETKE-VKVDAPIVH 229
                 57889**********999999888766.555555554 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 6.5e-05
                 T-HHHHHHHHHHHHHTTSS....EEEEEEE-STHHHHHHHHHHTTSSSEEEESSS--S--S---S-..................-SEEEEEEESS---T CS
      HDA2-3  89 tSgKFkvlndlvnliierkrksslnvlvvakskkeldLiEalllGkklkikrysgeklydekkkkskdtkknsrktkeklkkkihsltihllsttrqlt 187
                  SgK++vl +++  i  ++     +++++++  ++ld+ ++l   ++    r++g++  ++ +k              +  ++ +  ++++l +++   
  KHJ33532.1 605 YSGKMQVLDRMLARIRYDT---NDKIVLISNYTQTLDMFDRLCRERNYGSLRLDGTMNVTKRQKLV------------DRFNDPQGNEFIFLLSSKAGG 688
                 6************998887...568*******************************9999999988............222333345566666665553 PP

                 TTS--TT-S-EEEEEE-SST--TTSHHHHHHH----.------EEEEEETTSHHHHHHHHT CS
      HDA2-3 188 kdksllenikfdliiafDssvdtsspsveslrtqnr.kknklpiirlvpinSieHvkLcfk 247
                      l+ i ++ ++ fD++ +++ ++  + r  +  +k+++ ++r +++ +ie    +++
  KHJ33532.1 689 ---CGLNLIGANRLVLFDPDWNPAADQQALARVWRDgQKKDCFVYRFIATGTIEEKIFQRQ 746
                 ...3466666777888999999999998888875541445599999999999998766666 PP

>> SWI2_SNF2  SWI2/SNF2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00012      0.34       2     161 ..     265     442 ..     264     450 .. 0.56

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00012
   SWI2_SNF2   2 Qyravekavervke...gdrkgGviWHtqGSGKsltmvflakklle.e.elknpkv..vvvtDRkdLdkQlsktfaka......geekpkqaesrkeLk 87 
                 Q+ +v+ + + v+    ++ +g ++    G GK+l+ ++l+  ll+ + +  + ++   ++   + L k  ++++ k       +  + + + s++ L+
  KHJ33532.1 265 QIEGVKFMYRCVTGmieEEANGCIMADEMGLGKTLQCITLMWTLLKqSpDPGKSTIqkAIIACPSSLVKNWANELVKWlgpdaiQPFAIDGKASKEVLQ 363
                 555555555555444423333333445567777777766666666632233333332256666666666666666665222211111223455566666 PP

   SWI2_SNF2  88 ellek...esekiift..tiqKfeeeekeklevlsereniivlvDEaHRsqygelakkl.rkalpnaafigFTGTPilkk 161
                 ++l++   +s++ ++   +i  +e + + ++e+l++ +  ++l+DE+HR + g+ ++    + l+   ++ + GTPi+++
  KHJ33532.1 364 QQLRQwaiASGRAVTRpvIIVSYE-TLRLNVEELKNTKIGLMLCDEGHRLKNGDSQTFTaLNGLNVSRRVILSGTPIQND 442
                 666422222444444311333333.333468999999999************98777541578999999********864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (850 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.72u 0.27s 00:00:00.99 Elapsed: 00:00:00.43
# Mc/sec: 5947.23
//
Query:       KHJ33533.1  [L=393]
Description: putative constituent of 66s pre-ribosomal particles [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-45  155.7  34.2    1.3e-45  155.7  34.2    2.3  2  SURF6     Surfeit locus protein 6
    2.9e-17   63.0   2.2    2.9e-17   63.0   2.2    5.7  6  RRP14     60S ribosome biogenesis protein Rrp14


Domain annotation for each model (and alignments):
>> SURF6  Surfeit locus protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   8.0     0.022     2e+02      15      89 ..      37     114 ..      26     157 .. 0.51
   2 !  155.7  34.2   1.4e-49   1.3e-45       1     199 []     170     363 ..     170     363 .. 0.94

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.022
       SURF6  15 kekkkeekeeakkeeeekaeekkakeeaeakkskkkkkkkkeas.kkee..dlvFskldfedg.....aekkskkkkkkkkkk 89 
                 + kkk++ +e+ +++++++ + ++ ++a++  +++++k k e++ +  +  ++  + +++++      ++k s+++kk   +k
  KHJ33533.1  37 QWKKKKQTKEQTAAAQRAKLDPDSLKSAKDVMDERARKRKLEKKvE--AvdEILVTDIALKEVskhvlKQKISSNAKK---QK 114
                 2233333333333333333333333333333344444444433322..245777777777333122212222211111...22 PP

  == domain 2  score: 155.7 bits;  conditional E-value: 1.4e-49
       SURF6   1 eelleerrkkkeerkekkkeekeeakkeeeekaeekkakeeaeakkskkkkkkkkeaskkeedlvFskldfedgaekkskkkkkkk..kkkgptkkdpk 97 
                 +elle+rrkk+e r+++kke + +ak++ee++++++  ++++++++ ++++++   ++    +l+Fs+++f+dg+++++++++ k   +k+gp+  d+ 
  KHJ33533.1 170 QELLEARRKKEELRRAHKKELRLKAKADEEAQRHSAFISARSTDSSIESSAADPI-DN----SLTFSRVSFADGQQMTDDLNSFKAipRKRGPQ--DIA 261
                 69******************************99999999888885555554444.44....8***********************99999999..*** PP

       SURF6  98 qaLkkleakkakleelkeekrkeieekekWekalakaeGeKvkDDeklLkkalKrkekeKkkskkeWkeRkekvekkkaarqkKReeNikkRkeekkdk 196
                 + L   e+k++kl+ l+e+kr +ieeke W +a+++++GeK++++++lLkk+lKrkek+Kkks+ eW+eR+e+v+k +a rqkKReeN+k+R+e+k  k
  KHJ33533.1 262 TSLLVSEKKRQKLAGLDEKKRIDIEEKELWLNAKKRVHGEKLRNNTTLLKKTLKRKEKAKKKSESEWTERIEGVAKRQALRQKKREENLKQRRESKAVK 360
                 *************************************************************************************************99 PP

       SURF6 197 kkk 199
                 +k+
  KHJ33533.1 361 GKG 363
                 985 PP

>> RRP14  60S ribosome biogenesis protein Rrp14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.0   2.2   3.2e-21   2.9e-17       1      62 []       9      59 ..       9      59 .. 0.93
   2 ?   -3.7   5.9         2   1.8e+04      35      56 ..      94     115 ..      67     116 .. 0.79
   3 ?   -2.5   3.3      0.95   8.5e+03      33      48 ..     180     195 ..     164     205 .. 0.51
   4 ?   -3.9   0.3         2   1.8e+04      54      59 ..     269     274 ..     266     282 .. 0.64
   5 ?   -3.5   5.8       1.9   1.7e+04      37      49 ..     312     324 ..     291     341 .. 0.56
   6 ?   -9.3  12.0         2   1.8e+04      41      52 ..     346     357 ..     325     380 .. 0.53

  Alignments for each domain:
  == domain 1  score: 63.0 bits;  conditional E-value: 3.2e-21
       RRP14  1 rLeahnkfFdsLlslIPakfYlpkdeeeednskklkkqkkkkakkqtkeeskkaKraKLDPd 62
                rL++h+k+Fd+LlslIPak+Y++kd     ns+    q+kk  kkqtke++ +a raKLDPd
  KHJ33533.1  9 RLLEHAKSFDGLLSLIPAKHYYGKD-----NSE----QWKK--KKQTKEQTAAAQRAKLDPD 59
                799********************44.....555....9***..******************8 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2
       RRP14  35 lkkqkkkkakkqtkeeskkaKr 56 
                 lk+ +k   k+++  ++kk+K+
  KHJ33533.1  94 LKEVSKHVLKQKISSNAKKQKK 115
                 5667788888888999999886 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.95
       RRP14  33 kklkkqkkkkakkqtk 48 
                 ++l+ ++kk+   ++k
  KHJ33533.1 180 EELRRAHKKELRLKAK 195
                 1344444444444443 PP

  == domain 4  score: -3.9 bits;  conditional E-value: 2
       RRP14  54 aKraKL 59 
                 +Kr+KL
  KHJ33533.1 269 KKRQKL 274
                 355555 PP

  == domain 5  score: -3.5 bits;  conditional E-value: 1.9
       RRP14  37 kqkkkkakkqtke 49 
                 k  k+k+k++ k 
  KHJ33533.1 312 KTLKRKEKAKKKS 324
                 2223322222222 PP

  == domain 6  score: -9.3 bits;  conditional E-value: 2
       RRP14  41 kkakkqtkeesk 52 
                 ++++ +++ esk
  KHJ33533.1 346 REENLKQRRESK 357
                 222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2430  (0.135535); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.27s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 2703.40
//
Query:       KHJ33534.1  [L=1091]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.8e-13   48.5   0.5    1.9e-12   47.1   0.5    1.9  1  Integrase_H2C2  Integrase zinc binding domain
    1.4e-07   31.7   0.0    5.1e-07   29.9   0.0    1.9  2  rve             Integrase core domain


Domain annotation for each model (and alignments):
>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.5   2.1e-16   1.9e-12       3      55 ..     305     356 ..     303     359 .. 0.93

  Alignments for each domain:
  == domain 1  score: 47.1 bits;  conditional E-value: 2.1e-16
  Integrase_H2C2   3 kslrkeilkeaHdsagHlGiektlerlrrryyWpgmrkdvkkyvksCetCqrr 55 
                     ++++ ++l++aHd++g  ++e+tl++lr+ yyWp+m +dv++yv  C +C+++
      KHJ33534.1 305 HKEVSKVLTKAHDKGGYWSAEQTLKHLRE-YYWPRMASDVRNYVLDCLRCAKH 356
                     57889**********************86.99******************997 PP

>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0   5.7e-11   5.1e-07      18     117 ..     432     527 ..     424     529 .. 0.93
   2 ?   -2.6   0.0      0.65   5.8e+03      45      66 ..     658     681 ..     628     689 .. 0.69

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 5.7e-11
         rve  18 pdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpqdnGkvErfhrtlk 116
                 p++ +++++l+v+d fsr+++a++++   ++s v+++l   +++     p + +sDn++ + sk ++ fl  lg+ + + ++g  ++ G+vE+ + +++
  KHJ33534.1 432 PTKFRFSHVLAVIDYFSRFVWAFPCTGT-SSSEVVRCLAWLFSHISA--PVATYSDNQP-FGSKVVKSFLGGLGVIPIPVPVGAHRSVGMVEKHNDLVE 526
                 6778899*********************.999999999989999999..9********5.*********************************999988 PP

         rve 117 d 117
                 +
  KHJ33534.1 527 R 527
                 6 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.65
         rve  45 e..mdastvlalleravarfggve 66 
                 e  ++a+t+ a l+ a+++f+ +e
  KHJ33534.1 658 EekEMAKTIHAHLRTAISQFAISE 681
                 144688888999999999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1091 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       696  (0.0388198); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.24s 00:00:00.99 Elapsed: 00:00:00.43
# Mc/sec: 7628.71
//
Query:       KHJ33535.1  [L=199]
Description: putative vacuolar protein sorting-associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.1e-12   45.5   0.0    1.1e-11   45.2   0.0    1.1  1  Metallophos_2  Calcineurin-like phosphoesterase superfamily d


Domain annotation for each model (and alignments):
>> Metallophos_2  Calcineurin-like phosphoesterase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   0.0   6.2e-16   1.1e-11       3     151 ..       6     144 ..       5     166 .. 0.81

  Alignments for each domain:
  == domain 1  score: 45.2 bits;  conditional E-value: 6.2e-16
  Metallophos_2   3 laiiSDlH...snldaleavlealkevgvdaiihaGDleeeepevleellela.pvlaVrGNnDeevveedvlreaaelgtdlpeeaelelagekv 94 
                    +++i DlH   +++d+++++ + l   ++ + +++G+l  ++  + e l+++a ++++V+G+ D               +t+lp +++++ +  ++
     KHJ33535.1   6 VLVIGDLHipdRAIDIPAKFKKLLTPGKIGQTLCLGNL--TDKPTFEYLRSIApDLKIVKGRYD-------------VDATSLPLSQVVTHGLLRI 86 
                    79***********************************9..66669999999999**********.............89*****9999999***** PP

  Metallophos_2  95 lliHgdplgvkdalaellke.aeegsdvvvcGHtHvpevekeggvlvvnPGsvgeprd 151
                    +++ g +  ++ + + ll e ++ ++dv++ G tH+  + + ++  +vnPGs++++  
     KHJ33535.1  87 GFLEGFTTVAPLETDLLLAEaNKLDVDVLCWGGTHRFDAYELENKFFVNPGSATGAFP 144
                    *****9654444444444442234455**************************99843 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       271  (0.0151152); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1511.49
//
Query:       KHJ33536.1  [L=559]
Description: putative carboxylesterase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (559 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1099  (0.0612973); expected 358.6 (0.02)
Passed bias filter:                      217  (0.0121033); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 4235.31
//
Query:       KHJ33537.1  [L=179]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.14   12.2   3.5       0.29   11.1   3.5    1.5  1  DUF1451   Zinc-ribbon containing domain


Domain annotation for each model (and alignments):
>> DUF1451  Zinc-ribbon containing domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.5   1.6e-05      0.29     117     143 ..      49      75 ..      46      78 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 1.6e-05
     DUF1451 117 CekCgkelalkkteeippCpkCgateF 143
                 Ce C+  l++k+ +++p C +Cg+t+ 
  KHJ33537.1  49 CEICNGYLHIKNCSRVPSCGNCGSTNH 75 
                 ***********************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       641  (0.0357521); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 1499.37
//
Query:       KHJ33538.1  [L=711]
Description: putative shugoshin c terminal domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.8e-18   65.5   7.1      1e-17   63.7   7.1    2.1  1  Shugoshin_N  Shugoshin N-terminal coiled-coil region
    3.1e-09   36.4   6.5    3.1e-09   36.4   6.5    2.3  2  Shugoshin_C  Shugoshin C terminus


Domain annotation for each model (and alignments):
>> Shugoshin_N  Shugoshin N-terminal coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.7   7.1   1.2e-21     1e-17       1      45 []      17      61 ..      17      61 .. 0.98

  Alignments for each domain:
  == domain 1  score: 63.7 bits;  conditional E-value: 1.2e-21
  Shugoshin_N  1 lKrkylrqNreLAKsNsalslkirelekevseLlsENlnLRelil 45
                 lKrk++rqNr++A+ Ns++sl+ir+le+ +s LlsENl+LRe+il
   KHJ33538.1 17 LKRKFIRQNRDIARVNSTQSLRIRDLENDNSILLSENLSLREKIL 61
                 7******************************************96 PP

>> Shugoshin_C  Shugoshin C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   6.5   3.5e-13   3.1e-09       2      25 .]     462     485 ..     461     485 .. 0.98
   2 ?   -5.2   1.9         2   1.8e+04       4      10 ..     656     662 ..     656     663 .. 0.54

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 3.5e-13
  Shugoshin_C   2 RpsRrarkvvsYKEPSLnsKMRRP 25 
                  RpsRr r +vsY+EP+L+ KMRRP
   KHJ33538.1 462 RPSRRVRGSVSYAEPNLRQKMRRP 485
                  ***********************9 PP

  == domain 2  score: -5.2 bits;  conditional E-value: 2
  Shugoshin_C   4 sRrarkv 10 
                  sRr+r++
   KHJ33538.1 656 SRRNRRS 662
                  5666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (711 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1194  (0.066596); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.37
# Mc/sec: 5717.63
//
Query:       KHJ33539.1  [L=132]
Description: putative dash complex subunit dad2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.5e-31  108.0   1.3      3e-31  107.8   1.3    1.1  1  DASH_Dad2  DASH complex subunit Dad2
     0.0051   16.3   1.7     0.0054   16.2   1.7    1.1  1  Rogdi_lz   Rogdi leucine zipper containing protein
  ------ inclusion threshold ------
      0.054   13.3   0.8      0.085   12.6   0.8    1.3  1  DASH_Duo1  DASH complex subunit Duo1
      0.071   13.3   0.9       0.12   12.6   0.9    1.4  1  IFT20      Intraflagellar transport complex B, subunit 20


Domain annotation for each model (and alignments):
>> DASH_Dad2  DASH complex subunit Dad2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.8   1.3   6.6e-35     3e-31       2      99 .]      32     125 ..      31     125 .. 0.88

  Alignments for each domain:
  == domain 1  score: 107.8 bits;  conditional E-value: 6.6e-35
   DASH_Dad2   2 ariaeKraELeaLkqlrdlsdslakqleeLeeklstladgteavasVlanWqnvlraismaslkllqkaeeeaeeeeedeeeeeeeeplpetLVRIpv 99 
                 ari eK+ ELe+L+qlrdls++la+q+++Leekl+tl+dgte+va+Vl+nW++vl++i++a+ kl++  e++ e++   +    +e++lp+tLVRIp+
  KHJ33539.1  32 ARITEKKLELENLRQLRDLSAALAEQMQTLEEKLATLSDGTEVVATVLGNWHSVLQSINLATQKLPKPDENQMESNVPPS----TEQSLPQTLVRIPI 125
                 79***************************************************************955555444444433....3458********96 PP

>> Rogdi_lz  Rogdi leucine zipper containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   1.7   1.2e-06    0.0054      70     165 ..      24     116 ..       8     131 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.2e-06
    Rogdi_lz  70 lpk...ltlklnptkp..ivleqLtdlrtlltqaldlLdltlktgdelsksaqflssqLrllleslseAkalLkgppepelafpangwttesaashfeP 163
                  pk   l+ +++++k     l qL dl   l + +++L+ +l+t ++ +++ +++  + +++l+s++ A++ L +p e++ + ++       ++ + e+
  KHJ33539.1  24 CPKssiLHARITEKKLelENLRQLRDLSAALAEQMQTLEEKLATLSDGTEVVATVLGNWHSVLQSINLATQKLPKPDENQ-MESN-------VPPSTEQ 114
                 55555444444443334456899999999**********88888888877799999*********************954.3333.......1233333 PP

    Rogdi_lz 164 pl 165
                 +l
  KHJ33539.1 115 SL 116
                 33 PP

>> DASH_Duo1  DASH complex subunit Duo1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.8   1.9e-05     0.085       5      52 ..      40      87 ..      38      96 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.9e-05
   DASH_Duo1  5 EleqLrkinevienviesLkkaksniervketvestntLLdkWirIls 52
                Ele+Lr++++   ++ e++++ ++++ +++  +e + t L +W ++l+
  KHJ33539.1 40 ELENLRQLRDLSAALAEQMQTLEEKLATLSDGTEVVATVLGNWHSVLQ 87
                9******************************************99985 PP

>> IFT20  Intraflagellar transport complex B, subunit 20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.9   2.6e-05      0.12      80     117 ..      26      62 ..      17      65 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.6e-05
       IFT20  80 eqqqlqaliaekkaeleRlrvelesLqkveqeqkelie 117
                 +   l+a+i+ekk ele+lr +l+ L+ + +eq++++e
  KHJ33539.1  26 KSSILHARITEKKLELENLR-QLRDLSAALAEQMQTLE 62 
                 567899*************8.68889999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1349  (0.0752412); expected 358.6 (0.02)
Passed bias filter:                      882  (0.049194); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.35
# Mc/sec: 1125.26
//
Query:       KHJ33540.1  [L=1077]
Description: putative arm repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   7.4e-135  449.2   0.4   7.4e-135  449.2   0.4    3.2  3  CRM1_C          CRM1 C terminal
    1.6e-39  135.3  12.9    3.9e-39  134.1   6.0    4.2  4  Xpo1            Exportin 1-like protein
    1.4e-33  114.4   3.5    4.2e-33  112.8   3.5    1.9  1  CRM1_repeat_2   CRM1 / Exportin repeat 2
    9.2e-29   99.3   2.0    2.9e-28   97.7   0.9    2.6  2  CRM1_repeat_3   CRM1 / Exportin repeat 3
    1.1e-19   69.6   2.8    2.7e-19   68.4   2.8    1.7  1  CRM1_repeat     Chromosome region maintenance or exportin rep
    5.6e-14   51.8   0.1    2.4e-13   49.8   0.1    2.2  1  IBN_N           Importin-beta N-terminal domain
    0.00045   20.2  12.0       0.11   12.3   2.1    4.1  5  Sec7_N          Guanine nucleotide exchange factor in Golgi t
  ------ inclusion threshold ------
      0.038   14.6   0.3          2    9.0   0.0    3.9  3  Vac14_Fab1_bd   Vacuolar 14 Fab1-binding region
        0.1   12.8   1.1          1    9.6   0.1    3.0  3  Prolamin_like   Prolamin-like
       0.11   12.8   0.1        5.6    7.3   0.0    3.6  3  Importin_rep_4  Importin repeat
        0.3   11.0  12.3        0.3   11.0   0.0    4.9  6  DUF3385         Domain of unknown function (DUF3385)


Domain annotation for each model (and alignments):
>> CRM1_C  CRM1 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.3       0.8   1.3e+03     143     198 ..     106     160 ..     101     206 .. 0.73
   2 ?    1.0   0.8      0.12     2e+02     132     171 ..     547     586 ..     539     639 .. 0.68
   3 !  449.2   0.4  4.5e-138  7.4e-135       1     321 []     706    1034 ..     706    1034 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.8
      CRM1_C 143 llrainkkcfkallklpseqfklvidsivwafkHterdvaetgLnillellknvee 198
                 ll+++n   +++l +  +++  ++i+ i+ ++ Ht  +++e+ + il+ l ++v +
  KHJ33540.1 106 LLNKLNLVLISVLKQEWPHNWPTFINEIISSC-HTSLSICENNMAILRLLSEEVFD 160
                 78888888888888888888889999888655.79999999999998877777665 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.12
      CRM1_C 132 eyPehrveFfellrainkkcfkallklpseqfklvidsiv 171
                 +yP + + ++++l+ +++k f+ +++ ++    +  d+ +
  KHJ33540.1 547 QYPRFLKAHWKFLKTVVNKLFEFMHESHEGVQDMACDTFI 586
                 7899999999999999999999888765554444444444 PP

  == domain 3  score: 449.2 bits;  conditional E-value: 4.5e-138
      CRM1_C    1 QlgkiyldllklyklvseliseavaaegeiatktpkvrllrtvkkeiLkLietyiekaedleevlnnlveplleavLvdYkknvpeardaevLsllt 97  
                  Q+gkiyld+l++y+++s++iseava++geia k+p+vr+lrt+kkeiLkLietyieka+d e+v +n+v++ll+avLvdY++nvp+ardaevL++++
  KHJ33540.1  706 QIGKIYLDMLSMYRATSQMISEAVARDGEIAAKMPRVRGLRTIKKEILKLIETYIEKADDPEMVRTNIVPALLDAVLVDYNRNVPNARDAEVLKVMS 802 
                  9************************************************************************************************ PP

      CRM1_C   98 tlveklenlisdevpkileavfectldmikkdfeeyPehrveFfellrainkkcfkallklpseqfklvidsivwafkHterdvaetgLnillellk 194 
                  t+++kl++l++d+vp+i+e+vfectl+mi+kdf+e+Pehrv Ff llrain +cf+allkl+++qfk+vids++wa kH++r+v+ +gLn++lel++
  KHJ33540.1  803 TIITKLSSLMEDQVPTIMENVFECTLEMINKDFSEFPEHRVGFFTLLRAINLHCFPALLKLDNRQFKFVIDSCMWASKHDNREVEYAGLNMCLELIT 899 
                  ************************************************************************************************* PP

      CRM1_C  195 nveekkkeaanqFyknyylsllkevlkvltDtdhksgfklqaelLaklirlvesg.....sikvpllee...eqvtsnkvflseyvvellsnaFpnl 283 
                  n++e+++ ++n+F++++++ +l++v++vltDtdhk+gfk+q++lL +++++v+       +i+ p++++   + +tsnk+fl  +v++ll+naFpnl
  KHJ33540.1  900 NIAETDPATSNAFFQQFFIPILQDVFFVLTDTDHKAGFKSQSMLLSRMFYFVHPAdgatpKIQGPIYQPsqaPVGTSNKEFLGGFVATLLQNAFPNL 996 
                  ****************************************************98877777899999998887889********************** PP

      CRM1_C  284 sqkqveafvvglfelandlkkfkehlrDflislkefsg 321 
                  +  q+++fv+glf+l++++++fk +lrDfli+lkefsg
  KHJ33540.1  997 QLGQIKTFVEGLFTLNKSNDRFKLNLRDFLIQLKEFSG 1034
                  ************************************86 PP

>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.1   6.0   2.4e-42   3.9e-39       2     149 .]     104     248 ..     103     248 .. 0.98
   2 ?    1.7   0.0      0.15   2.4e+02     102     136 ..     747     781 ..     704     798 .. 0.77
   3 ?   -0.2   0.0      0.59   9.7e+02      71      97 ..     807     833 ..     796     848 .. 0.62
   4 ?   -3.2   0.1       4.8   7.8e+03      23      69 ..    1000    1050 ..     988    1055 .. 0.71

  Alignments for each domain:
  == domain 1  score: 134.1 bits;  conditional E-value: 2.4e-42
                 HHHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCT.HHHHHHHHHHHHHHHHHHHTSHTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH CS
        Xpo1   2 kflrnklaealaelflqeypnnWpsffddllsllssspsglelllriLkvlpeEiadfsrskleqerrndlkdllrsnvqkilelllqileqsqskkqs 100
                 + l+nkl+++l+  ++qe+p+nWp+f+++++s++++s+s +e+++ iL++l+eE++d+s +++++ ++++lk +++++++ i++l++++l++ ++    
  KHJ33540.1 104 RTLLNKLNLVLISVLKQEWPHNWPTFINEIISSCHTSLSICENNMAILRLLSEEVFDYSADQMTSTKTKNLKITMCAEFSSIFQLCSEVLNSATQ---- 198
                 679***************************************************************************************99997.... PP

                 HHHHHHHHHHHHHHTTTS-HHHHHTSCHHHHH.HHHCCSCCCHHHHHHHH CS
        Xpo1 101 selveavLkclsswvswidiglivnnpllnll.fqlLsdpelreaavecL 149
                 + l++a+L++l ++++wi++g+i+++p++++l  ++L+ pe+r+ +++cL
  KHJ33540.1 199 QGLIKATLETLLRFFNWIPLGYIFETPIIDTLrTRFLEMPEFRNVTLKCL 248
                 89******************************9****************8 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.15
                 HHHHHHHHHHHHHTTTS-HHHHHTSCHHHHHHHHC CS
        Xpo1 102 elveavLkclsswvswidiglivnnpllnllfqlL 136
                  + +++Lk ++ +++  d   +v ++++++l++++
  KHJ33540.1 747 TIKKEILKLIETYIEKADDPEMVRTNIVPALLDAV 781
                 577899******************99999998876 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.59
                 HHHHHHHHHHHHHHHHHHHHHHHHHHC CS
        Xpo1  71 dlkdllrsnvqkilelllqileqsqsk 97 
                 +l  l++++v++i+e ++++  ++ +k
  KHJ33540.1 807 KLSSLMEDQVPTIMENVFECTLEMINK 833
                 556666677666655555555444443 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 4.8
                  TSTTHHHHHHHHHCT.HHHHHHHHHHHHHHHHHHHT....SHTTTSCHHHH CS
        Xpo1   23 nWpsffddllsllssspsglelllriLkvlpeEiad....fsrskleqerr 69  
                  ++++f++ l+ l +s++    +l  +L  l+e  +d    +  +k++qer+
  KHJ33540.1 1000 QIKTFVEGLFTLNKSNDRFKLNLRDFLIQLKEFSGDnaelYADEKEQQERE 1050
                  567888888888888866666666666666666666555777777777774 PP

>> CRM1_repeat_2  CRM1 / Exportin repeat 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.8   3.5   2.6e-36   4.2e-33       1      68 []     402     469 ..     402     469 .. 0.98

  Alignments for each domain:
  == domain 1  score: 112.8 bits;  conditional E-value: 2.6e-36
  CRM1_repeat_2   1 rkqlYkeiLsqlrlvlierMakPeEVliveneeGeivretvkdtdtialYktmretLvyLthLdvedt 68 
                    rk++Y+e+Ls+lr+v+ie+M++PeEVliven+eGeivre+vk++dti+lYkt re+LvyLthLdv dt
     KHJ33540.1 402 RKHKYNEVLSNLRVVIIEKMVRPEEVLIVENDEGEIVREFVKESDTIQLYKTTRECLVYLTHLDVVDT 469
                    799**************************************************************997 PP

>> CRM1_repeat_3  CRM1 / Exportin repeat 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.7   0.9   1.8e-31   2.9e-28       1      51 []     482     532 ..     482     532 .. 0.99
   2 ?   -2.7   0.0       4.1   6.7e+03      31      46 ..     557     572 ..     556     575 .. 0.82

  Alignments for each domain:
  == domain 1  score: 97.7 bits;  conditional E-value: 1.8e-31
  CRM1_repeat_3   1 dgseWswnnlnkLCWAiGSISgamseedEkrfLvtvikdLLnLceekrgkd 51 
                    dgseWsw+n+n+LCWAiGSIS am+e++EkrfLvtvikdLL L+e+krgkd
     KHJ33540.1 482 DGSEWSWANCNTLCWAIGSISLAMNEDTEKRFLVTVIKDLLGLTEMKRGKD 532
                    79***********************************************98 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 4.1
  CRM1_repeat_3  31 rfLvtvikdLLnLcee 46 
                    +fL tv+++L++++ e
     KHJ33540.1 557 KFLKTVVNKLFEFMHE 572
                    6999*****9998765 PP

>> CRM1_repeat  Chromosome region maintenance or exportin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.4   2.8   1.7e-22   2.7e-19       3      37 .]     329     363 ..     327     363 .. 0.96

  Alignments for each domain:
  == domain 1  score: 68.4 bits;  conditional E-value: 1.7e-22
                  HHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH CS
  CRM1_repeat   3 llaalqYLvkISeVedrEiFKICLEYWnkLvseLY 37 
                  l +a+ YL++IS+++drEiFKICLEYW+kLv+eLY
   KHJ33540.1 329 LTHAHYYLIRISQIDDREIFKICLEYWCKLVQELY 363
                  789*******************************9 PP

>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.8   0.1   1.5e-16   2.4e-13       1      74 []      26      92 ..      26      92 .. 0.97

  Alignments for each domain:
  == domain 1  score: 49.8 bits;  conditional E-value: 1.5e-16
                HHHHHHHHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHCGSXHHHHHHHHHHHHHHHHH CS
       IBN_N  1 AekqLkqlekqpgflsallqilanseselevRqlAalyLknlitkhWsdeeekqslpseekeqIrnnllnllgs 74
                A+ +L+q+++ p++++++  il++ + + ++++l++++L n i  +W+       lp+e+ + Irn+++n +++
  KHJ33540.1 26 AQIALNQFKEDPDSWLLVDKILQDATFP-QTKYLGLQVLDNVIMTRWK------VLPKEQCQGIRNFVVNFIIQ 92
                6779************************.*******************......****************9986 PP

>> Sec7_N  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   2.1     7e-05      0.11      32     126 ..      55     148 ..      42     194 .. 0.79
   2 ?   -3.2   0.0       4.3   7.1e+03      68     100 ..     335     366 ..     313     369 .. 0.77
   3 ?    3.6   0.0     0.033        54      43     120 ..     544     622 ..     516     639 .. 0.78
   4 !    8.6   0.1     0.001       1.7      43     134 ..     752     851 ..     711     863 .. 0.69
   5 ?   -3.3   0.0       4.4   7.2e+03      33      48 ..     891     906 ..     870     934 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 7e-05
      Sec7_N  32 sktfsLeLlesvlsnhgdvfrkhpellqllkqklcplLlknlsespsfpvf.erslrivllLlkkfrseLktEievflsllilillesdsslwqrv 126
                 +k ++L+ l +v+ ++ +v+   +e+ q +++ ++++++++ s+++s ++  +++ ++ l+L++ +++e+     +f++++i    +s s  ++ +
  KHJ33540.1  55 TKYLGLQVLDNVIMTRWKVL--PKEQCQGIRNFVVNFIIQCSSSEESLKTQrTLLNKLNLVLISVLKQEWPHNWPTFINEIISSCHTSLSICENNM 148
                 7899****************..9*******************97777777624455677888899*****************99864433233333 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 4.3
      Sec7_N  68 lLlknlsespsfpvferslrivllLlkkfrseL 100
                  L+++  +  + ++f ++l+    L++++++e+
  KHJ33540.1 335 YLIRIS-QIDDREIFKICLEYWCKLVQELYNEM 366
                 566666.66677788888888888888887776 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.033
      Sec7_N  43 vlsnhgdvfrkhpellqllkqklcplLlknlsespsfpvferslrivllLlkkfrseLktEievflsllililles...ds 120
                 ++ ++++++++h ++l+ + +kl++++  +  e  +   +   ++i  +  ++f +   +E e f++++++ + ++   d 
  KHJ33540.1 544 IVGQYPRFLKAHWKFLKTVVNKLFEFMHESH-EGVQDMACDTFIKIAKQCKRHFVTLQPNETEPFIEEIVRNM-RKityDL 622
                 6667778888899999999999999888888.7677777777888888888888888889**********998.4445444 PP

  == domain 4  score: 8.6 bits;  conditional E-value: 0.001
      Sec7_N  43 vlsnhgdvfrkhpellqllkqklcplLlknls...espsfpvf.erslrivllLlkkfrseLktEievflsllililles.dssl....wqrvlaLeil 132
                 +l+  ++ + ++ +  ++++++++p+Ll  +    ++++++     +l++++++++k++s +++++ ++++ ++  +le+ ++ +    ++rv +  +l
  KHJ33540.1 752 ILKLIETYI-EKADDPEMVRTNIVPALLDAVLvdyNRNVPNARdAEVLKVMSTIITKLSSLMEDQVPTIMENVFECTLEMiNKDFsefpEHRVGFFTLL 849
                 444444444.33333578999999999998886663333332225699******************************999665555668888777777 PP

      Sec7_N 133 rr 134
                 r 
  KHJ33540.1 850 RA 851
                 65 PP

  == domain 5  score: -3.3 bits;  conditional E-value: 4.4
      Sec7_N  33 ktfsLeLlesvlsnhg 48 
                   + LeL+ ++ ++ +
  KHJ33540.1 891 LNMCLELITNIAETDP 906
                 5566677766665543 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0    0.0012         2      23      64 ..     557     598 ..     550     635 .. 0.79
   2 ?   -0.5   0.0       1.1   1.9e+03      57      84 ..     792     819 ..     785     828 .. 0.76
   3 ?   -1.8   0.0         3     5e+03      21      45 ..     913     937 ..     893     947 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0012
  Vac14_Fab1_bd  23 eyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlk 64 
                    ++l+++v+ +++ ++++ + v   ac+++  iak++k ++++
     KHJ33540.1 557 KFLKTVVNKLFEFMHESHEGVQDMACDTFIKIAKQCKRHFVT 598
                    799**********************************99876 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.1
  Vac14_Fab1_bd  57 vakgevlkllneifdalvklvaDsdesv 84 
                    +   evlk++++i + l++l+ D+ + +
     KHJ33540.1 792 ARDAEVLKVMSTIITKLSSLMEDQVPTI 819
                    5567889999999999999998876655 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 3
  Vac14_Fab1_bd  21 ikeyleeivkpvlkcfsDkdsrvRy 45 
                     ++++  i++ v+ +++D+d++  +
     KHJ33540.1 913 FQQFFIPILQDVFFVLTDTDHKAGF 937
                    4566667777788888888887655 PP

>> Prolamin_like  Prolamin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       7.4   1.2e+04      35      53 ..     450     468 ..     436     481 .. 0.74
   2 ?    9.6   0.1   0.00062         1      14      54 ..     564     604 ..     557     619 .. 0.77
   3 ?   -0.4   0.0      0.85   1.4e+03      36      56 ..     850     869 ..     848     883 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 7.4
  Prolamin_like  35 llkigkeCwpallkllvft 53 
                    l k+++eC   l++l v++
     KHJ33540.1 450 LYKTTRECLVYLTHLDVVD 468
                    5677888888877776655 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00062
  Prolamin_like  14 deilksilknkesvsreCCqallkigkeCwpallkllvftl 54 
                    ++ ++++ ++ e v++  C  + ki k+C +++++l++ ++
     KHJ33540.1 564 NKLFEFMHESHEGVQDMACDTFIKIAKQCKRHFVTLQPNET 604
                    4556666654436**********************988774 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.85
  Prolamin_like  36 lkigkeCwpallkllvftlpq 56 
                    + i+ +C+pallkl   ++ +
     KHJ33540.1 850 RAINLHCFPALLKL-DNRQFK 869
                    67899********9.556343 PP

>> Importin_rep_4  Importin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.9   3.2e+03       5      34 ..     263     292 ..     259     299 .. 0.72
   2 ?    0.1   0.0      0.63     1e+03      22      48 ..     547     573 ..     532     584 .. 0.83
   3 ?    7.3   0.0    0.0034       5.6       2      52 ..     884     935 ..     883     942 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.9
  Importin_rep_4   5 edaaRqsalEllvtlaenaPkmvrkeaeft 34 
                     +++   +  E+l+t+a+  P ++  +a++ 
      KHJ33540.1 263 DEKLISMFTEVLTTIANIIPLTLDLKATYN 292
                     555556667899999998888887777765 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.63
  Importin_rep_4  22 naPkmvrkeaefteklvvqvLslmtev 48 
                     + P+ ++ + +f +++v ++ ++m e 
      KHJ33540.1 547 QYPRFLKAHWKFLKTVVNKLFEFMHES 573
                     5799999*****************986 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0034
  Importin_rep_4   2 kdledaaRqsalEllvtlaenaPkmvrkeae.fteklvvqvLslmtevedde 52 
                     +++e a  ++ lEl++ +ae+ P++     + f+  ++++v  ++t+ ++++
      KHJ33540.1 884 REVEYAGLNMCLELITNIAETDPATSNAFFQqFFIPILQDVFFVLTDTDHKA 935
                     56666667789**************9986555**************998876 PP

>> DUF3385  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.2      0.84   1.4e+03     110     154 ..      66     111 ..      42     119 .. 0.59
   2 ?   -2.3   0.0       2.3   3.8e+03      24      42 ..     237     255 ..     226     260 .. 0.80
   3 ?   -2.2   0.0       2.1   3.4e+03     121     157 ..     272     309 ..     260     311 .. 0.56
   4 ?   11.0   0.0   0.00019       0.3      72     151 ..     502     583 ..     436     593 .. 0.77
   5 ?    4.2   0.1     0.022        36      60     147 ..     643     727 ..     622     732 .. 0.76
   6 ?   -0.6   0.1      0.65   1.1e+03     102     139 ..     792     829 ..     746     844 .. 0.64

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.84
     DUF3385 110 aimnifktlglkcvpfLdqiipallsvirtte.esnlrefllqqLa 154
                 +im+  k l  ++ + +++ + +++  ++++e + + + +ll++L+
  KHJ33540.1  66 VIMTRWKVLPKEQCQGIRNFVVNFIIQCSSSEeSLKTQRTLLNKLN 111
                 3466666677777777777777777777765514567778888886 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 2.3
     DUF3385  24 sqsirrevikllGilGALD 42 
                   + r+ ++k+l+ +G L 
  KHJ33540.1 237 MPEFRNVTLKCLTEIGGLE 255
                 6789999*********885 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2.1
     DUF3385 121 kcvpfLdqiipallsvir..tteesnlrefllqqLatLv 157
                 ++++++ +iip  l +    +t++  +++ ++q+La ++
  KHJ33540.1 272 EVLTTIANIIPLTLDLKAtyNTSN-ARDQEFIQNLALFI 309
                 455566667776665444113333.45556666666665 PP

  == domain 4  score: 11.0 bits;  conditional E-value: 0.00019
     DUF3385  72 mvglspsneeyyptvvinaLlrilkdpslsshhaavveaimnifkt..lglkc.vpfLdqiipallsvirtteesnlrefllq 151
                 +  + + +e  +  +vi+ Ll + + +  ++++a v + im+i+ +    lk   +fL+ ++++l++ +++++e  ++++  +
  KHJ33540.1 502 SLAMNEDTEKRFLVTVIKDLLGLTEMKRGKDNKAVVASNIMYIVGQypRFLKAhWKFLKTVVNKLFEFMHESHE-GVQDMACD 583
                 444566779999999*****************************984433555588**************9988.77776655 PP

  == domain 5  score: 4.2 bits;  conditional E-value: 0.022
     DUF3385  60 eeaaretdlsllmvglspsneeyyptvvinaLlrilkdpslsshhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlre 147
                 +++a+e  +s+lm     + + ++++ + n   +il+d+   +   +v+++ ++ ++++g+   p + +i  ++ls+ r t++  ++e
  KHJ33540.1 643 QKNAQERLISELMSYPNAAWDSIIEQAATNP--SILQDAETIKVIGNVMKTNVSACSSIGSYFYPQIGKIYLDMLSMYRATSQ-MISE 727
                 4556666677777777666677777777777..88888888888888888888888888888888999999999999998776.6655 PP

  == domain 6  score: -0.6 bits;  conditional E-value: 0.65
     DUF3385 102 shhaavveaimnifktlglkcvpfLdqiipallsvirt 139
                    a+v++++ +i+++l++ +   ++ i+ ++++++ +
  KHJ33540.1 792 ARDAEVLKVMSTIITKLSSLMEDQVPTIMENVFECTLE 829
                 45566777777777777777777777777777766554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1077 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       987  (0.0550505); expected 358.6 (0.02)
Passed bias filter:                      653  (0.0364214); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.79u 0.26s 00:00:01.05 Elapsed: 00:00:00.42
# Mc/sec: 7698.97
//
Query:       KHJ33541.1  [L=629]
Description: putative srf-type transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-24   83.2   0.2      1e-23   82.6   0.2    1.3  1  SRF-TF    SRF-type transcription factor (DNA-binding and dime


Domain annotation for each model (and alignments):
>> SRF-TF  SRF-type transcription factor (DNA-binding and dimerisation domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.6   0.2   5.6e-28     1e-23       2      48 .]      11      57 ..      10      57 .. 0.98

  Alignments for each domain:
  == domain 1  score: 82.6 bits;  conditional E-value: 5.6e-28
      SRF-TF  2 IeneraRqvtFsKRrnGLfKKAsELsvLcgvevavvvfspngklytf 48
                I+++r+R+vtF KR+ GLfKKA+ELsvLc+v+vav++f++n+kly++
  KHJ33541.1 11 IKDDRNRSVTFLKRKGGLFKKAHELSVLCSVDVAVIIFGSNKKLYEY 57
                99*******************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (629 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      242  (0.0134977); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 4458.67
//
Query:       KHJ33542.1  [L=1043]
Description: putative importin-beta domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-14   53.8   0.7    7.4e-14   51.4   0.2    2.6  2  IBN_N     Importin-beta N-terminal domain
  ------ inclusion threshold ------
       0.01   15.7   3.4       0.17   11.8   0.4    2.9  2  STAG      STAG domain
      0.026   14.6   0.6      0.026   14.6   0.6    3.2  3  Xpo1      Exportin 1-like protein
      0.043   13.1   0.1      0.096   11.9   0.1    1.5  1  GBP       Guanylate-binding protein, N-terminal domain


Domain annotation for each model (and alignments):
>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.4   0.2   1.6e-17   7.4e-14       1      70 [.      37     105 ..      37     109 .. 0.96
   2 ?   -1.7   0.0      0.62   2.8e+03      12      43 ..     136     168 ..     133     171 .. 0.80

  Alignments for each domain:
  == domain 1  score: 51.4 bits;  conditional E-value: 1.6e-17
                 HHHHHHHHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHCGSXHHHHHHHHHHHHH CS
       IBN_N   1 AekqLkqlekqpgflsallqilanseselevRqlAalyLknlitkhWsdeeekqslpseekeqIrnnlln 70 
                 A++qL+++e+q g++s+l+    n++++ evR++A+++Lkn ++k W++++++ s++s+ek++Ir+ ll+
  KHJ33542.1  37 ATQQLQEWETQRGYFSLLQAAYLNKSLPTEVRYIAIIQLKNGVDKFWRKSAKN-SISSDEKATIRSHLLD 105
                 89**********************************************77777.*************997 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.62
                 TCHHHHHHHHHHCTTSHHHHH.HHHHHHHHHHH CS
       IBN_N  12 pgflsallqilanseselevR.qlAalyLknli 43 
                 p+ l+ l+ i+  s +++ +R q + l+L +l+
  KHJ33542.1 136 PEVLPNLIKIIRESRHSNRLRlQRGMLMLLQLV 168
                 7889999**********9999777777776665 PP

>> STAG  STAG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.4   3.8e-05      0.17      26      92 ..     145     211 ..     139     219 .. 0.83
   2 ?    3.2   0.2     0.018        80      13      58 ..     641     685 ..     634     698 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.8e-05
        STAG  26 lvesahekglLydeelmenlltwltalSssklRpfRhtaTlialklqtaLvevakelskeleklqrq 92 
                 +++++ +++ L  +  m +ll+++ +l+s+ lR++R   Tlia +l+  L+e+ +e   + ++++  
  KHJ33542.1 145 IIRESRHSNRLRLQRGMLMLLQLVKELASARLRSLRSNFTLIAEELVFLLSEIYVENLVAWSTQKNE 211
                 6677777777777888999****************************99999998876666665555 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.018
        STAG  13 kkfrknlveFfeklvesahekglLydeelmenlltwltalSssklR 58 
                   f +++++++ ++ e a e+++L  ++++++l t +++l s++ R
  KHJ33542.1 641 LPFADHIISMLASFWELA-EEEYLLKQSIFSTLSTIVVSLQSASDR 685
                 568889999999999999.999999***************988766 PP

>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.6   5.9e-06     0.026       4      58 ..     115     173 ..     112     215 .. 0.77
   2 ?   -0.5   0.1      0.26   1.2e+03      62      89 ..     381     411 ..     317     426 .. 0.66
   3 ?   -1.6   0.0      0.55   2.4e+03      80      99 ..     709     733 ..     693     789 .. 0.63

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 5.9e-06
                 HHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCT.....HHHHHHHHHHHHHHHHHHHT CS
        Xpo1   4 lrnklaealaelflqeypnnWpsffddllsllsss....psglelllriLkvlpeEiad 58 
                 l  + a++l+++++ +ypn+Wp+++++l++ ++ s      +l+  + +L+ l +E+a+
  KHJ33542.1 115 LALQNALLLSKIVRIDYPNEWPEVLPNLIKIIRESrhsnRLRLQRGMLMLLQLVKELAS 173
                 5567799**********************777776566644455555555555566554 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.26
                 TTSCHHH.HHHHHHHHHHH..HHHHHHHHHH CS
        Xpo1  62 skleqer.rndlkdllrsn..vqkilelllq 89 
                  k eq++ +  ++++l s   +q++++ll +
  KHJ33542.1 381 IKVEQKKaTDLIRTQLLSDslIQQVANLLVT 411
                 4445555333444444444688888888765 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.55
                 HHHHHHHHHHHHHHHHHCC.....H CS
        Xpo1  80 vqkilelllqileqsqskk.....q 99 
                 +++ l+l+ ++le+ +s+      +
  KHJ33542.1 709 LEDALDLWANVLETTSSTVspeilS 733
                 5666777777777777665333330 PP

>> GBP  Guanylate-binding protein, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   2.1e-05     0.096     193     248 ..     354     409 ..     327     418 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.1e-05
                 HHHHHHHHHHHHHHESEEEEEEEE-SSHHHHCSTCGCSCBGGGS-HHHHHHHHHHH CS
         GBP 193 lqkanllRkcirkfFpkrkcFvldrPglkkalnakleelkedeldeeFkkqlkelv 248
                 l+  n lR cir +F+  + F    P  k++ ++  + ++ + l ++ ++q+++l+
  KHJ33542.1 354 LKGLNILRACIRMVFNPLQSFKYRSPEIKVEQKKATDLIRTQLLSDSLIQQVANLL 409
                 566799**********************************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1043 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       677  (0.0377601); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.30s 00:00:01.02 Elapsed: 00:00:00.45
# Mc/sec: 6931.65
//
Query:       KHJ33543.1  [L=204]
Description: putative type 1 phosphatases regulator ypi1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.2e-22   76.6  15.6    2.8e-21   75.1  13.4    2.7  2  PPI_Ypi1  Protein phosphatase inhibitor
  ------ inclusion threshold ------
       0.54    8.5   7.9       0.57    8.4   7.9    1.1  1  CDC45     CDC45-like protein
        8.7    4.8  16.0         10    4.5  16.0    1.1  1  Macoilin  Macoilin family


Domain annotation for each model (and alignments):
>> PPI_Ypi1  Protein phosphatase inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.39   2.3e+03       3      14 ..       9      37 ..       7      46 .. 0.45
   2 !   75.1  13.4   4.6e-25   2.8e-21       1      59 [.      61     121 ..      61     133 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.39
    PPI_Ypi1  3 rLrg.................eekkkkkk 14
                 Lrg                 ++++++++
  KHJ33543.1  9 TLRGgelapaipqtqhdyhlgQQQRSRSN 37
                55555555555544444444322333322 PP

  == domain 2  score: 75.1 bits;  conditional E-value: 4.6e-25
    PPI_Ypi1   1 vLrLrg..eekkkkkkkskrrVrWeedvvDNEgmnkkksKiCCIyhkprefdesSsessss 59 
                 vLrLrg  +++++ +++ +r+++W+e v++NEgmnkkksK+CCIyh pref+esS+essss
  KHJ33543.1  61 VLRLRGisSNQNSDRNNINRHIHWDESVINNEGMNKKKSKVCCIYHAPREFGESSEESSSS 121
                 7*****8777788888889***********************************8888876 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   7.9   9.6e-05      0.57     103     195 ..      80     179 ..      29     203 .. 0.49

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 9.6e-05
       CDC45 103 rivvfDDgdi.eeeleeereayealeeeeesd....eedeeeeeeddddeeeeeeeeedeedeeedee.eskkkrk...sksdeeee....sdddders 188
                 r + +D+  i +e +++++++++ + + + +     ee++++e+++d+  ++++e+ +  +d++++++ +s++++k   + s+   +    + +d+e +
  KHJ33543.1  80 RHIHWDESVInNEGMNKKKSKVCCIYHAPREFgessEESSSSEDSSDS--SDSSENCSGFNDNTKHSSpRSTHRSKaaaK-SH---RgrhhKCNDNEIK 172
                 456688888734556666665444444444432110222222222222..222222222222222222022222222221.11...1222322222222 PP

       CDC45 189 rkrrrse 195
                  ++++ +
  KHJ33543.1 173 YSKNKCN 179
                 2222222 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5  16.0    0.0017        10     262     381 ..      70     184 ..      15     201 .. 0.47

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0017
    Macoilin 262 akssrsdskkkhehnesvdsklqekeymenkskskrlsksessgsesellveesvkskssssssssnknskkasagsagssnssskkhsessksvtsss 360
                 ++   ++++++ +++ + d+ + ++e m nk ksk    ++++ +      ees++s+ ss+ss+   +s++ s+ + ++  ss+++  ++sk  ++s 
  KHJ33543.1  70 NQ---NSDRNNINRHIHWDESVINNEGM-NKKKSKVCCIYHAPREFG-ESSEESSSSEDSSDSSD---SSENCSGFNDNTKHSSPRST-HRSKAAAKSH 159
                 11...11112222223344444444433.233333333332222222.22233333333334443...34444444445555555543.3344444444 PP

    Macoilin 361 ....ssknskkqklpaGkssaalkd 381
                     ++ n++  k++  k +++++ 
  KHJ33543.1 160 rgrhHKCNDNEIKYSKNKCNTRQRS 184
                 3444888888888876666665443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1387  (0.0773607); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1467.05
//
Query:       KHJ33544.1  [L=266]
Description: putative oxidoreductase ucpa [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.4e-52  177.8   0.0    3.2e-52  177.4   0.0    1.1  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
    4.9e-39  133.8   0.1    7.5e-39  133.2   0.1    1.3  1  adh_short     short chain dehydrogenase
    1.4e-07   31.7   0.2      2e-07   31.1   0.2    1.2  1  KR            KR domain


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.4   0.0   5.4e-56   3.2e-52       4     233 ..      18     261 ..      12     262 .. 0.90

  Alignments for each domain:
  == domain 1  score: 177.4 bits;  conditional E-value: 5.4e-56
                   TSHHHHHHHHHHHTT-EEEEEESS......GGH..HHHHHHHHHHTTSE..E..EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GG CS
  adh_short_C2   4 sgIGraiAkalaeeGaevvltdln......eea..kkrveelaeelgae..v..lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfl 88 
                    gIGrai  ++ ++G++v++  l+       ++   ++++++++e++++  +  ++ D++ +++ ++l+e +v++fg++Dilv nag+++   ++fl
    KHJ33544.1  18 TGIGRAITLEYIRQGCNVAINHLDlpsdlhHKSslLAEIDAIQKEFDQAgrFieVAGDISIPNTGKELIEVTVREFGGIDILVSNAGVCQF--AQFL 112
                   7*******************8665211111333345678888889886666469*************************************..**** PP

                   GH-HHHHHHHHHHHTHHHHHHHHHHHH...HCTSCCEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGS CS
  adh_short_C2  89 etsreefdraldvnlyslfllakaalp...lmkeggsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgi 182
                   +++ + f+ +l +nl+++f++++aa++   l ++gg i+ +ss++a ++   +++y+ +Ka++ +l++++Av lg+++iR+Na  pg i+T+++++ 
    KHJ33544.1 113 DLDHDLFASTLGINLHGAFYTCQAAARqmaLQNRGGCIIGISSISALVGGGLQTHYTPTKAGVLSLMQSMAVALGKYKIRCNALLPGTINTQLNKND 209
                   ***************************65333455************************************************************99 PP

                   TTHHHHHHHHHHHSTTSS-B-HHHHHHHHHHHC.SGGGTT--SEEEEESTTG CS
  adh_short_C2 183 kgfdelleelearaplgrlgtpeevaeaalfLa.sdeasyitGqtlvvDgGl 233
                    +  e +e++e+r+plgr+g+p++ a  a+fLa  +++ y++G++l vDgGl
    KHJ33544.1 210 LEVTEKREYMESRIPLGRIGEPKDLAGPAVFLAcEELSGYVNGSQLLVDGGL 261
                   99******************************83467889***********7 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.2   0.1   1.3e-42   7.5e-39       1     190 [.       9     209 ..       9     214 .. 0.88

  Alignments for each domain:
  == domain 1  score: 133.2 bits;  conditional E-value: 1.3e-42
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEE..EESCHHHHHH...HHHHHHHT......TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvv..vdrseeklee...vakelkee......gakalaiqvDvtdreevealvekavkklgkldvLvnNAGit 88 
                 k + +tG+  GIGrai  e++++G++v++  +d  +++l++   +++e+ +       + +++ +++D++  +  ++l+e  v ++g++d+Lv NAG+ 
  KHJ33544.1   9 KSAAITGGITGIGRAITLEYIRQGCNVAInhLD-LPSDLHHkssLLAEIDAIqkefdqAGRFIEVAGDISIPNTGKELIEVTVREFGGIDILVSNAGVC 106
                 5689************************97333.33333321113344433333266667899************************************ PP

                 --SSGGGCSHHHHHHHHHHHTHHHHHHHHHHHHHHH.HCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHH CS
   adh_short  89 gsgpfselseeewervievNltgvflltravlpaml.kqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdm 186
                 ++++f +l+ + + +++ +Nl+g+f +++a++++m  ++++G I+ +sS+ ++v+   ++ Y+ +Ka+v +l++s+a  l +++ir+na+ PG ++T++
  KHJ33544.1 107 QFAQFLDLDHDLFASTLGINLHGAFYTCQAAARQMAlQNRGGCIIGISSISALVGGGLQTHYTPTKAGVLSLMQSMAVALGKYKIRCNALLPGTINTQL 205
                 ***********************************9999************************************************************ PP

                 HHHH CS
   adh_short 187 akel 190
                 +k+ 
  KHJ33544.1 206 NKND 209
                 9975 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.2   3.3e-11     2e-07       4     156 ..      12     175 ..      10     185 .. 0.80

  Alignments for each domain:
  == domain 1  score: 31.1 bits;  conditional E-value: 3.3e-11
                 EEETTTSHHHHHHHHHHHHHH....S-EEEEE-SS..--HHHHHHHHHHHHT...T-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE-------- CS
          KR   4 litGGlGgLGlelarwlaekg....arhlvllsRsaaadedskaliaeleal...gaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdk 95 
                  itGG+ g+G++++   +++g     +hl l s  +  +++  a+i+++++      +   va D+s ++  ++l+e   +e++ i   +  Agv + +
  KHJ33544.1  12 AITGGITGIGRAITLEYIRQGcnvaINHLDLPSDLH-HKSSLLAEIDAIQKEfdqAGRFIEVAGDISIPNTGKELIEVTVREFGGIDILVSNAGVCQFA 109
                 59************9999998533235677777763.333334455555543321336667789*********************************** PP

                 -TTT--HHHHHHHHTTTTHHHHHHHHHTTT.....S--SEEEEEEEHHHHH--TT-HHHHHHHHHH CS
          KR  96 lleemtaedleqvlapKvkGawnLhelled.....esldffvlfSSiagllgsagqanYaaaNafl 156
                 ++ +++ + +++ l   ++Ga    ++ ++     ++   ++ +SSi++l+g   q++Y+ + a +
  KHJ33544.1 110 QFLDLDHDLFASTLGINLHGAFYTCQAAARqmalqNRGGCIIGISSISALVGGGLQTHYTPTKAGV 175
                 *********************9887777665555577789*******************9877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2134.01
//
Query:       KHJ33545.1  [L=322]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.034   14.5   4.3       0.89    9.9   0.4    2.7  3  ATG_C     Autophagy-related protein C terminal domain
        0.1   13.1  11.5        0.2   12.2  11.2    1.6  1  DUF4786   Domain of unknown function (DUF4786)


Domain annotation for each model (and alignments):
>> ATG_C  Autophagy-related protein C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.1    0.0028        25      11      62 ..      66     117 ..      62     126 .. 0.92
   2 ?    9.9   0.4   9.9e-05      0.89      30      73 ..     134     177 ..     128     197 .. 0.80
   3 ?   -2.3   0.0      0.68   6.1e+03      66      94 ..     244     273 ..     223     274 .. 0.56

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0028
       ATG_C  11 lreGlqqAysslskglksaaqtilavpsevaeskgakgavkavvravPvavl 62 
                 +r+ ++ A  +++++l+   + i + +s+ ++ +  + ++k+v ++ P  v+
  KHJ33545.1  66 IRDTMEAAAAGIKDKLRIILTGINESNSKTSQTNRKTMTLKKVSHKKPEKVI 117
                 8999***************************************999998777 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 9.9e-05
       ATG_C  30 aqtilavpsevaeskgakgavkavvravPvavlrPligateavs 73 
                  q+ +a++++++++k+a+++ ++v+r+ P +  +P+++a+  + 
  KHJ33545.1 134 NQDSMANETKNQTKKTAQSSWTEVIRRNPKTHTKPTQIAVTRTV 177
                 5677899999*************************998866554 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.68
       ATG_C  66 igateavsktlqGvrnql.dpearkesedK 94 
                  +a+ea+ ++l+     l d +++ e   K
  KHJ33545.1 244 TAASEAARNLLLQEARVLkDLDMKLEPASK 273
                 456666666554433333355666655555 PP

>> DUF4786  Domain of unknown function (DUF4786)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2  11.2   2.3e-05       0.2      62     137 ..      93     166 ..      73     184 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.3e-05
     DUF4786  62 atetktpfkklpipfvsnGkPsrvyqwngavlkkalkkkpkfasvlaadrnrlldiesiptwrk.....gkaklkkplkpk 137
                 + +++t++k+++++ vs  kP++v  ++++ + + ++k+p++++++a++ +++++ + +++w +     +       + ++
  KHJ33545.1  93 SKTSQTNRKTMTLKKVSHKKPEKVIDLTTTQTRSDMEKRPTNQDSMANETKNQTKKTAQSSWTEvirrnP-------KTHT 166
                 345569********************************************************97444433.......2222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2126  (0.118579); expected 358.6 (0.02)
Passed bias filter:                      597  (0.033298); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.38
# Mc/sec: 2536.42
//
Query:       KHJ33546.1  [L=245]
Description: hypothetical protein EV44_g0606 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       281  (0.0156729); expected 358.6 (0.02)
Passed bias filter:                      192  (0.0107089); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1848.31
//
Query:       KHJ33547.1  [L=287]
Description: putative yip1 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-14   53.2  15.2    4.5e-14   52.5  15.2    1.4  1  Yip1      Yip1 domain
  ------ inclusion threshold ------
      0.043   13.6   6.2      0.069   12.9   6.2    1.3  1  DUF1282   Protein of unknown function (DUF1282)
        4.6    5.4  12.3        5.6    5.1  12.3    1.1  1  DUF2070   Predicted membrane protein (DUF2070)
        5.7    6.8   5.0         24    4.8   0.2    2.8  3  DUF4538   Domain of unknown function (DUF4538)


Domain annotation for each model (and alignments):
>> Yip1  Yip1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.5  15.2   9.9e-18   4.5e-14       8     148 ..      89     256 ..      82     280 .. 0.75

  Alignments for each domain:
  == domain 1  score: 52.5 bits;  conditional E-value: 9.9e-18
        Yip1   8 vfrrlkkepp................................................ilrapdlallllalltlllgllaslnlgqtlasgeevqglt 58 
                 +++++ ++++                                                 lr++dl+++l+++l l l+l ++            +++ +
  KHJ33547.1  89 IWSKMQQVLYpkylfggsmpttlrgtydtlratnreellglagrvvdteallegsmseGLRDWDLWGPLVFCLLLSLFLSFT------------AASEQ 175
                 5555555555555555555555555555555555555566666666666666677777889*********************............77889 PP

        Yip1  59 lssllgaiiggylglllgllllalllhliakllggkgsfkqtlsvvgyallPlilgaliaillllllgtllllvgllaliWslvllylgl 148
                 +s +++++++ ++   +g +++++ ++l    lgg++sf+q+++v+gy+l+P+++++l++++ l++     + + l++++Wsl++ +  l
  KHJ33547.1 176 KSLVFSGVFAMIW---IGEAVVTAQIKL----LGGNISFAQSICVIGYTLFPIVIASLLSVFHLPIVAR--IPIYLILIAWSLAAGVSIL 256
                 9999999999999...9**********9....*****************************99887775..7788888888876554443 PP

>> DUF1282  Protein of unknown function (DUF1282)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   6.2   1.5e-05     0.069      56     136 ..     168     249 ..     149     280 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.5e-05
     DUF1282  56 kltlassliisvvfylalgvlvlayliklmgrtydsqhsyskifafaayalvplflgglalglsllllva.lvslllllyvv 136
                 ++t as + + v +++++++ +  ++++   + ++++ s+++ + +++y+l+p++++ l+++  l +     + l+l+++++
  KHJ33547.1 168 SFTAASEQKSLVFSGVFAMIWIGEAVVTAQIKLLGGNISFAQSICVIGYTLFPIVIASLLSVFHLPIVARiPIYLILIAWSL 249
                 5677777777788888888999999999999****************************99876666554244455555544 PP

>> DUF2070  Predicted membrane protein (DUF2070)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  12.3    0.0012       5.6      18     138 ..     157     277 ..     148     287 .] 0.80

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0012
     DUF2070  18 llliillalligllaflssklfgillfglpalvaflltlpvlrilggrltykrslflalltelivviisllaillsallqalvllalvlslalvfalrl 116
                 l++ +ll+l++++ a   +k   +  ++  + +  ++++  +++lgg++   +s+ +   t++++vi sll+++   +++++ ++ ++++++l++++++
  KHJ33547.1 157 LVFCLLLSLFLSFTAASEQKSLVFSGVFAMIWIGEAVVTAQIKLLGGNISFAQSICVIGYTLFPIVIASLLSVFHLPIVARIPIYLILIAWSLAAGVSI 255
                 56677777777777665555333333333345555666677889*********************************99999***************** PP

     DUF2070 117 lvlvavsdesllkavlpaliqp 138
                 l    v +++++ av p ++  
  KHJ33547.1 256 LGGSGVVKNRVGIAVYPLFVFY 277
                 ************9998877654 PP

>> DUF4538  Domain of unknown function (DUF4538)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       2.4   1.1e+04       8      17 ..     178     187 ..     175     189 .. 0.78
   2 ?    4.8   0.2    0.0053        24      14      30 ..     211     227 ..     203     229 .. 0.82
   3 ?    3.3   0.1     0.016        70      16      26 ..     265     275 ..     254     276 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 2.4
     DUF4538   8 llvggvvgli 17 
                 l+++gv ++i
  KHJ33547.1 178 LVFSGVFAMI 187
                 7899999987 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0053
     DUF4538  14 vgliglalYPiiiaPll 30 
                 + +ig +l+Pi+ia ll
  KHJ33547.1 211 ICVIGYTLFPIVIASLL 227
                 789**********8665 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.016
     DUF4538  16 liglalYPiii 26 
                  +g+a+YP+++
  KHJ33547.1 265 RVGIAVYPLFV 275
                 59******987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2010.23
//
Query:       KHJ33548.1  [L=520]
Description: putative dead deah box dna helicase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-16   60.2   1.3    1.2e-08   35.3   0.1    2.5  2  Ran_BP1   RanBP1 domain


Domain annotation for each model (and alignments):
>> Ran_BP1  RanBP1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.1   6.5e-13   1.2e-08       2      44 ..     370     412 ..     369     418 .. 0.91
   2 !   23.5   0.1   2.9e-09   5.3e-05      42     116 ..     439     513 ..     424     519 .. 0.76

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 6.5e-13
                 ---SSTTEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEETT CS
     Ran_BP1   2 vksgEEdEevlfkqraKLfrfdaekkewkeRGvGdiKilkkkd 44 
                 +  gE dE ++ + raKLf  +++k++wkeRGvG +Ki+  k+
  KHJ33548.1 370 IDDGEADEVTILQIRAKLFAIESKKSGWKERGVGTLKINLPKN 412
                 6789**********************************97766 PP

  == domain 2  score: 23.5 bits;  conditional E-value: 2.9e-09
                 ETTT.TEEEEEEEETTTTEEEEEEEE-TTS-E.EESTTESSEEEEEEEE-TTSSSEEEEEEEEESSHHHHHHHHHHH CS
     Ran_BP1  42 kkdd.ekvRllmRrdqvlkvcaNhvitkemkl.kplagsdrslvwtaadaadeeakleqlaikfkkkeeadefkkkf 116
                 ++++ ++ Rl+mR++ + +v++N  i  em++ +  a+s  ++++ +a   ++e k+++l +k+ +  +++ f++++
  KHJ33548.1 439 ETNSaQAARLIMRQESTHRVILNTFILREMEFeEKSAVSSAQFLF-TAFEGEKEVKPVRLLLKMSEL-NSKLFRSEI 513
                 44445889************************5556667777777.566678899999999987654.445566555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1381  (0.077026); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.30s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 3393.77
//
Query:       KHJ33549.1  [L=162]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       519  (0.0289475); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.21s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1267.41
//
Query:       KHJ33550.1  [L=146]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1104.83
//
Query:       KHJ33551.1  [L=126]
Description: putative small nuclear ribonucleoprotein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-13   50.0   0.0    2.8e-13   49.3   0.0    1.3  1  LSM       LSM domain
  ------ inclusion threshold ------
        4.4    6.0   7.1        5.1    5.8   7.1    1.1  1  API5      Apoptosis inhibitory protein 5 (API5)


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.0   3.1e-17   2.8e-13       3      66 ..       7      70 ..       6      71 .. 0.94

  Alignments for each domain:
  == domain 1  score: 49.3 bits;  conditional E-value: 3.1e-17
                HHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEEE CS
         LSM  3 lkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivlis 66
                l   ++  ++velkng++l G L++ D +mNl +++v+ t++d+++  +l +v+++G+ni ++ 
  KHJ33551.1  7 LTAAQGFPMLVELKNGETLNGHLVSGDIWMNLTMKEVVQTSPDGDKFYRLAEVYVKGSNIKYLR 70
                566778899****************************************************985 PP

>> API5  Apoptosis inhibitory protein 5 (API5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   7.1   0.00057       5.1     482     519 .]      87     125 ..      62     125 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.00057
        API5 482 vppsgklsnkanessgkgrgsgsrgrgrg.gggrGrGrG 519
                 +  sg  s k  +++g +r ++ rgrgrg  +grGrGrG
  KHJ33551.1  87 QNNSGYKSGKGGSNRGDHRNNNDRGRGRGnARGRGRGRG 125
                 3556777788888899999999******76777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       425  (0.0237046); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 987.31
//
Query:       KHJ33552.1  [L=518]
Description: putative pentatricopeptide repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-17   61.9  14.6    8.3e-05   22.7   0.0    8.1 10  PPR_2     PPR repeat family
    5.5e-14   52.0   5.2     0.0018   18.3   0.0    5.6  7  PPR_3     Pentatricopeptide repeat domain
    3.6e-09   36.3  17.7      0.015   15.5   0.1    8.5 12  PPR       PPR repeat
    1.5e-06   27.8   2.6       0.26   10.6   0.0    4.0  4  PPR_long  Pentacotripeptide-repeat region of PRORP
    1.7e-05   24.4   0.0        1.7    8.4   0.0    4.2  3  PPR_1     PPR repeat
     0.0019   18.9   0.0          3    8.9   0.0    4.2  4  TPR_14    Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.033   14.7   0.1         10    6.7   0.0    3.3  4  TPR_19    Tetratricopeptide repeat
       0.45   10.7   3.0         15    6.0   0.2    3.2  3  TPR_2     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.32   7.1e+02      18      41 ..      77     100 ..      58     108 .. 0.76
   2 ?   -2.8   0.0       3.4   7.5e+03      24      33 ..     118     127 ..     117     132 .. 0.77
   3 !   11.1   0.1   0.00016      0.35       8      35 ..     137     164 ..     135     179 .. 0.86
   4 ?   -0.2   0.1      0.54   1.2e+03       9      28 ..     173     192 ..     168     196 .. 0.84
   5 !   17.2   0.0   1.9e-06    0.0042       6      39 ..     276     309 ..     272     320 .. 0.92
   6 ?    0.0   0.0      0.44   9.9e+02      12      47 ..     317     353 ..     313     356 .. 0.74
   7 !    9.6   0.1   0.00047       1.1       5      50 .]     346     391 ..     342     391 .. 0.87
   8 !   22.7   0.0   3.7e-08   8.3e-05       1      45 [.     377     423 ..     377     426 .. 0.89
   9 !   13.8   0.1   2.2e-05     0.049       5      33 ..     418     446 ..     417     448 .. 0.95
  10 ?   -0.2   0.1      0.54   1.2e+03      23      34 ..     478     489 ..     475     502 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.32
       PPR_2  18 kveeAfklfneMkkrglePnsyTy 41 
                   e+  +l++eM k g+  +s  y
  KHJ33552.1  77 SAESVRDLLSEMDKFGIIKDSQVY 100
                 5678889*******9997777666 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 3.4
       PPR_2  24 klfneMkkrg 33 
                 k+++eM+k+ 
  KHJ33552.1 118 KILSEMRKNW 127
                 8899**9985 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 0.00016
       PPR_2   8 tlIsglckkgkveeAfklfneMkkrgle 35 
                 +lI gl +++++e A+k f++M + ++ 
  KHJ33552.1 137 HLIIGLIRDRQYEVALKNFEQMLQDNID 164
                 7999******************999884 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.54
       PPR_2   9 lIsglckkgkveeAfklfne 28 
                  +  lc+ ++++e f+++++
  KHJ33552.1 173 FMYQLCESEEYDEVFSMLKY 192
                 56679**********99886 PP

  == domain 5  score: 17.2 bits;  conditional E-value: 1.9e-06
       PPR_2   6 yNtlIsglckkgkveeAfklfneMkkrglePnsy 39 
                 y +lI +++k +++++Af+ +  M k g+ P+++
  KHJ33552.1 276 YEALIEAYAKSKDLKSAFRALCIMAKAGFNPDAS 309
                 889*****************************86 PP

  == domain 6  score: 0.0 bits;  conditional E-value: 0.44
       PPR_2  12 glckkgk.veeAfklfneMkkrglePnsyTysilikg 47 
                 +l  ++k +  A+ +++e  + g   +    +++i +
  KHJ33552.1 317 CLSSDRKlPTHAWNVLDEIHSDGQIITITAVNVVIEA 353
                 55554444889*******9999988888888888765 PP

  == domain 7  score: 9.6 bits;  conditional E-value: 0.00047
       PPR_2   5 tyNtlIsglckkgkveeAfklfneMkkrglePnsyTysilikglck 50 
                 + N++I + + + +++eA+ ++++       Pn+ T++ +++gl k
  KHJ33552.1 346 AVNVVIEASVSQLNIDEAMVMYKKIHTICSGPNTATFNHILQGLSK 391
                 6799999999999999999999999998888999999999999976 PP

  == domain 8  score: 22.7 bits;  conditional E-value: 3.7e-08
       PPR_2   1 pdvvtyNtlIsglck..kgkveeAfklfneMkkrglePnsyTysili 45 
                 p++ t+N++++gl k      +eA+ l +eMk+ +++P+s Ty  li
  KHJ33552.1 377 PNTATFNHILQGLSKtvIPSKKEAMFLASEMKSLSIKPDSLTYDRLI 423
                 9*************954456899********************7666 PP

  == domain 9  score: 13.8 bits;  conditional E-value: 2.2e-05
       PPR_2   5 tyNtlIsglckkgkveeAfklfneMkkrg 33 
                 ty  lI  +++++++e+Af+ ++eM + g
  KHJ33552.1 418 TYDRLILICLREKDYEDAFRYLEEMIREG 446
                 8999*********************9987 PP

  == domain 10  score: -0.2 bits;  conditional E-value: 0.54
       PPR_2  23 fklfneMkkrgl 34 
                 ++++ eM+kr+ 
  KHJ33552.1 478 WEILAEMEKRSM 489
                 777788888765 PP

>> PPR_3  Pentatricopeptide repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.7   3.8e+03      18      45 ..      63      92 ..      60      96 .. 0.67
   2 !    5.8   0.0    0.0065        14       2      46 ..      84     128 ..      83     131 .. 0.86
   3 !    9.1   0.0    0.0006       1.4       1      46 [.     118     163 ..     118     167 .. 0.95
   4 !   14.5   0.0   1.2e-05     0.028      13      48 ..     271     306 ..     270     309 .. 0.93
   5 !    6.5   0.1     0.004         9       2      58 ..     331     387 ..     330     391 .. 0.90
   6 !   18.3   0.0     8e-07    0.0018       3      44 ..     404     445 ..     402     447 .. 0.92
   7 ?   -3.5   0.1         5   1.1e+04      36      44 ..     479     487 ..     478     490 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.7
       PPR_3 18 YthLLta..yanagnkklalevlermkkkg 45
                Y +L++a  +a+ g  + +   l +m k g
  KHJ33552.1 63 YAALIRAnaSAYFGSAESVRDLLSEMDKFG 92
                888887622556677777777777777665 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0065
       PPR_3   2 ilremerkgikldvvtYthLLtayanagnkklalevlermkkkgi 46 
                 +l em++ gi  d   Y   L a a   ++ l +++l +m+k+ i
  KHJ33552.1  84 LLSEMDKFGIIKDSQVYHYALLALAIHPDYLLRMKILSEMRKNWI 128
                 788999999988887777667777999***************977 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.0006
       PPR_3   1 silremerkgikldvvtYthLLtayanagnkklalevlermkkkgi 46 
                 +il em ++ i l+  ++ hL+ + ++ + ++ al+ +e+m ++ i
  KHJ33552.1 118 KILSEMRKNWITLSSDDWHHLIIGLIRDRQYEVALKNFEQMLQDNI 163
                 6999*************************************99877 PP

  == domain 4  score: 14.5 bits;  conditional E-value: 1.2e-05
       PPR_3  13 ldvvtYthLLtayanagnkklalevlermkkkgikP 48 
                 ld + Y +L++aya+ +++k a++ l  m k g +P
  KHJ33552.1 271 LDPYHYEALIEAYAKSKDLKSAFRALCIMAKAGFNP 306
                 57799**************************99998 PP

  == domain 5  score: 6.5 bits;  conditional E-value: 0.004
       PPR_3   2 ilremerkgikldvvtYthLLtayanagnkklalevlermkkkgikPtvvtyNailg 58 
                 +l+e+  +g  + +   +  ++a++ + n + a+   +++      P+  t+N il+
  KHJ33552.1 331 VLDEIHSDGQIITITAVNVVIEASVSQLNIDEAMVMYKKIHTICSGPNTATFNHILQ 387
                 68888888888889999999********************999999*********96 PP

  == domain 6  score: 18.3 bits;  conditional E-value: 8e-07
       PPR_3   3 lremerkgikldvvtYthLLtayanagnkklalevlermkkk 44 
                   em+   ik+d  tY  L+  + + +++++a++ le+m  +
  KHJ33552.1 404 ASEMKSLSIKPDSLTYDRLILICLREKDYEDAFRYLEEMIRE 445
                 579************************************665 PP

  == domain 7  score: -3.5 bits;  conditional E-value: 5
       PPR_3  36 evlermkkk 44 
                 e+l++m+k 
  KHJ33552.1 479 EILAEMEKR 487
                 788999886 PP

>> PPR  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.092   2.1e+02      14      31 .]      76      93 ..      70      93 .. 0.87
   2 ?   -1.5   0.1       1.8     4e+03      20      29 ..     117     126 ..     117     128 .. 0.83
   3 !    6.4   0.0    0.0056        12       3      31 .]     135     163 ..     134     163 .. 0.93
   4 ?   -0.1   0.1      0.66   1.5e+03       9      24 ..     176     191 ..     170     192 .. 0.84
   5 ?   -3.5   0.0       7.5   1.7e+04       3      12 ..     206     215 ..     205     220 .. 0.77
   6 !   12.0   0.1   9.1e-05       0.2       2      31 .]     275     304 ..     274     304 .. 0.92
   7 ?   -2.7   0.0       4.4   9.9e+03      17      30 ..     326     339 ..     323     339 .. 0.75
   8 ?    3.7   0.0     0.039        87       3      26 ..     347     370 ..     345     373 .. 0.90
   9 ?   -1.2   0.0       1.4   3.1e+03       2      12 ..     381     391 ..     380     392 .. 0.90
  10 ?   -2.7   0.2       4.2   9.3e+03      18      29 ..     399     410 ..     398     412 .. 0.79
  11 !   15.5   0.1   6.8e-06     0.015       2      30 ..     418     446 ..     417     446 .. 0.95
  12 ?   -2.9   0.1         5   1.1e+04      20      29 ..     478     487 ..     476     488 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.092
         PPR 14 GkleeAlelfkeMkekGi 31
                G  e + +l+ eM + Gi
  KHJ33552.1 76 GSAESVRDLLSEMDKFGI 93
                7778999********997 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.8
         PPR  20 lelfkeMkek 29 
                 ++++ eM+++
  KHJ33552.1 117 MKILSEMRKN 126
                 6899****97 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0056
         PPR   3 ynslIsgycknGkleeAlelfkeMkekGi 31 
                 +  lI g+ + +++e Al+ f++M++++i
  KHJ33552.1 135 WHHLIIGLIRDRQYEVALKNFEQMLQDNI 163
                 7789********************99876 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.66
         PPR   9 gycknGkleeAlelfk 24 
                  +c + +++e+++++k
  KHJ33552.1 176 QLCESEEYDEVFSMLK 191
                 589999*******987 PP

  == domain 5  score: -3.5 bits;  conditional E-value: 7.5
         PPR   3 ynslIsgyck 12 
                 +  l+++++k
  KHJ33552.1 206 WHFLMDSFGK 215
                 7779999998 PP

  == domain 6  score: 12.0 bits;  conditional E-value: 9.1e-05
         PPR   2 tynslIsgycknGkleeAlelfkeMkekGi 31 
                  y +lI +y+k+ +l+ A++ ++ M + G+
  KHJ33552.1 275 HYEALIEAYAKSKDLKSAFRALCIMAKAGF 304
                 5889*********************99886 PP

  == domain 7  score: -2.7 bits;  conditional E-value: 4.4
         PPR  17 eeAlelfkeMkekG 30 
                   A  +++e+ ++G
  KHJ33552.1 326 THAWNVLDEIHSDG 339
                 57888899988776 PP

  == domain 8  score: 3.7 bits;  conditional E-value: 0.039
         PPR   3 ynslIsgycknGkleeAlelfkeM 26 
                  n++I + ++  +++eA+ ++k++
  KHJ33552.1 347 VNVVIEASVSQLNIDEAMVMYKKI 370
                 59999****************986 PP

  == domain 9  score: -1.2 bits;  conditional E-value: 1.4
         PPR   2 tynslIsgyck 12 
                 t+n +++g++k
  KHJ33552.1 381 TFNHILQGLSK 391
                 9********98 PP

  == domain 10  score: -2.7 bits;  conditional E-value: 4.2
         PPR  18 eAlelfkeMkek 29 
                 eA+ l  eMk+ 
  KHJ33552.1 399 EAMFLASEMKSL 410
                 8888999**986 PP

  == domain 11  score: 15.5 bits;  conditional E-value: 6.8e-06
         PPR   2 tynslIsgycknGkleeAlelfkeMkekG 30 
                 ty  lI  + ++ ++e+A+++++eM+++G
  KHJ33552.1 418 TYDRLILICLREKDYEDAFRYLEEMIREG 446
                 78899**********************98 PP

  == domain 12  score: -2.9 bits;  conditional E-value: 5
         PPR  20 lelfkeMkek 29 
                  e++ eM+++
  KHJ33552.1 478 WEILAEMEKR 487
                 58999**987 PP

>> PPR_long  Pentacotripeptide-repeat region of PRORP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.086   1.9e+02      72     141 ..      41     113 ..      28     140 .. 0.73
   2 ?    4.0   0.0     0.012        28      28      64 ..     149     185 ..     143     196 .. 0.83
   3 !    9.2   0.1   0.00031      0.71      88     186 ..     237     335 ..     225     352 .. 0.75
   4 !   10.6   0.0   0.00012      0.26      96     187 ..     350     443 ..     326     451 .. 0.58

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.086
                 HHHHHHHHHHHH.TT----HHHHHHHHHHHHHT..T-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHHTT-H CS
    PPR_long  72 argfevfeamka.kgvspnEatvtalarlaaak..edgdlafelvkemekagvsPrLRsyaPaLaayckagda 141
                 +  +++ e++ + ++ +p    ++al+r  a++  + ++   +l +em k g+      y  aL a+    d 
  KHJ33552.1  41 NVIYQIVEHLITvRKEKPCSLHYAALIRANASAyfGSAESVRDLLSEMDKFGIIKDSQVYHYALLALAIHPDY 113
                 4457888887655788899999999999988876788899999999999999988888888888877665555 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.012
                 HHHHHHHHHHHHSSS---HHHHHHHHHHHHHC.HCST CS
    PPR_long  28 aaAlelydkavaegvrlaqyhynvllylcskaeaase 64 
                 + Al+ ++++ ++++ + +  +++++y + ++e+ +e
  KHJ33552.1 149 EVALKNFEQMLQDNIDVKPWLFDIFMYQLCESEEYDE 185
                 679***********************97778776554 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00031
                 --HHHHHHHHHHHHHTT-HHHHHHHHHHHH.HH-S---HHHHHHHHHHHHHTT-HHHHHHHHHHHHHCT----HHHHHHHHH.HHHHTT-HHHHHHHHH CS
    PPR_long  88 pnEatvtalarlaaakedgdlafelvkeme.kagvsPrLRsyaPaLaayckagdadkaleveehlkasgveleEaelaaLLk.vsakagredkvYelLh 184
                 p++ +++a    aa  +d +la ++ + ++ ++ ++P    y+ ++ ay k++d++ a+ +   ++++g +++ ++   LL  +s +     + +++L+
  KHJ33552.1 237 PSDGMLSAALNTAARYADPQLATSVASFLSaRSALDPY--HYEALIEAYAKSKDLKSAFRALCIMAKAGFNPDASNTRPLLAcLSSDRKLPTHAWNVLD 333
                 77888888888999999999999998888635567785..79999999999999999999999999999999999888888624555555555555555 PP

                 HH CS
    PPR_long 185 kl 186
                 ++
  KHJ33552.1 334 EI 335
                 55 PP

  == domain 4  score: 10.6 bits;  conditional E-value: 0.00012
                 HHHHHHHTT-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHHTT..-HHHHHHHHHHHHHCT----HHHHHHHHHHHHHTT-HHHHHHHHHHHH CS
    PPR_long  96 larlaaakedgdlafelvkemekagvsPrLRsyaPaLaayckag..dadkaleveehlkasgveleEaelaaLLkvsakagredkvYelLhklr 187
                 ++   +++ + d+a  + k++++    P   +++ +L+ ++k+     + a+   + +k+  ++++   +  L+ ++++  + +  +++L++++
  KHJ33552.1 350 VIEASVSQLNIDEAMVMYKKIHTICSGPNTATFNHILQGLSKTVipSKKEAMFLASEMKSLSIKPDSLTYDRLILICLREKDYEDAFRYLEEMI 443
                 3334444455666666666666666666666666666666665321344456666666666666666666666666666666666666666554 PP

>> PPR_1  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0   0.00078       1.7       6      33 ..     272     299 ..     270     300 .. 0.88
   2 ?    3.3   0.0     0.029        66       5      17 ..     377     389 ..     375     391 .. 0.93
   3 !    7.3   0.0    0.0017       3.7       3      33 ..     412     442 ..     410     443 .. 0.94

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00078
                 -HHHHHHHHHHHHHTS-HHHHHHHHHHH CS
       PPR_1   6 dvvTYNtLIdGlCkaGrvdeAfelfdeM 33 
                 d + Y  LI ++ k  +++ Af+ +  M
  KHJ33552.1 272 DPYHYEALIEAYAKSKDLKSAFRALCIM 299
                 7789******************987655 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.029
                 --HHHHHHHHHHH CS
       PPR_1   5 PdvvTYNtLIdGl 17 
                 P++ T+N ++ Gl
  KHJ33552.1 377 PNTATFNHILQGL 389
                 9*********998 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0017
                 ----HHHHHHHHHHHHHTS-HHHHHHHHHHH CS
       PPR_1   3 lkPdvvTYNtLIdGlCkaGrvdeAfelfdeM 33 
                 +kPd  TY  LI  + ++ + ++Af+ ++eM
  KHJ33552.1 412 IKPDSLTYDRLILICLREKDYEDAFRYLEEM 442
                 89***************************** PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.31     7e+02       4      31 ..     135     162 ..     132     170 .. 0.87
   2 ?    2.5   0.1      0.15   3.3e+02       6      29 ..     278     301 ..     273     316 .. 0.75
   3 ?   -2.8   0.0       7.8   1.8e+04      17      29 ..     360     372 ..     359     382 .. 0.77
   4 !    8.9   0.0    0.0014         3       4      31 ..     419     446 ..     416     458 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.31
      TPR_14   4 llalaeallalGdpdeAiallrralala 31 
                 +  l   l + ++++ A++ ++++l+++
  KHJ33552.1 135 WHHLIIGLIRDRQYEVALKNFEQMLQDN 162
                 778899999***************9965 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.15
      TPR_14   6 alaeallalGdpdeAiallrrala 29 
                 al ea++ + d++ A ++l  + +
  KHJ33552.1 278 ALIEAYAKSKDLKSAFRALCIMAK 301
                 799**************9976666 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 7.8
      TPR_14  17 pdeAiallrrala 29 
                  deA+ +++++  
  KHJ33552.1 360 IDEAMVMYKKIHT 372
                 799**99999865 PP

  == domain 4  score: 8.9 bits;  conditional E-value: 0.0014
      TPR_14   4 llalaeallalGdpdeAiallrralala 31 
                 + +l  ++l+  d+++A ++l+++++ +
  KHJ33552.1 419 YDRLILICLREKDYEDAFRYLEEMIREG 446
                 5678889*****************9965 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0    0.0045        10       1      21 [.     142     162 ..     142     172 .. 0.89
   2 ?   -1.5   0.1       1.7   3.8e+03      26      44 ..     277     292 ..     255     296 .. 0.71
   3 ?   -3.9   0.0         8   1.8e+04      40      50 ..     359     369 ..     355     371 .. 0.60
   4 ?    3.7   0.0     0.041        91       2      20 ..     427     445 ..     427     457 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0045
      TPR_19   1 llaegdyaeAlalleqalqed 21 
                 l+ + +y+ Al+ +eq+lq++
  KHJ33552.1 142 LIRDRQYEVALKNFEQMLQDN 162
                 57789*************986 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.7
      TPR_19  26 earllLAeallalgqldeA 44 
                 ea   L+ea+ ++++l+ A
  KHJ33552.1 277 EA---LIEAYAKSKDLKSA 292
                 44...44888888888877 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 8
      TPR_19  40 qldeAealLda 50 
                 ++deA+ + ++
  KHJ33552.1 359 NIDEAMVMYKK 369
                 55666665554 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.041
      TPR_19   2 laegdyaeAlalleqalqe 20 
                 l e+dy++A ++le+++ e
  KHJ33552.1 427 LREKDYEDAFRYLEEMIRE 445
                 5799***********9766 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.036        80      12      29 ..     143     160 ..     140     164 .. 0.86
   2 ?   -2.3   0.1         3   6.8e+03      10      23 ..     282     295 ..     281     296 .. 0.81
   3 ?    6.0   0.2    0.0065        15      10      29 ..     425     444 ..     424     447 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.036
       TPR_2  12 yklgdyeeAleafekAle 29 
                 ++  +ye Al+ fe+ l+
  KHJ33552.1 143 IRDRQYEVALKNFEQMLQ 160
                 67789**********997 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 3
       TPR_2  10 ayyklgdyeeAlea 23 
                 ay+k++d++ A +a
  KHJ33552.1 282 AYAKSKDLKSAFRA 295
                 89999999999765 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0065
       TPR_2  10 ayyklgdyeeAleafekAle 29 
                 ++++ +dye+A +++e+ ++
  KHJ33552.1 425 ICLREKDYEDAFRYLEEMIR 444
                 7899************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       763  (0.0425568); expected 358.6 (0.02)
Passed bias filter:                      565  (0.0315132); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.39
# Mc/sec: 3964.22
//
Query:       KHJ33553.1  [L=351]
Description: putative mfs transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-20   73.4  25.0    1.9e-20   73.1  25.0    1.1  1  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.1  25.0     1e-24   1.9e-20       1     293 [.      33     351 .]      32     351 .] 0.78

  Alignments for each domain:
  == domain 1  score: 73.1 bits;  conditional E-value: 1e-24
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllll.fasslwlllvlrvlqGlg 98 
                 +ll+af ++l+  i+  a+  +++++++i+++   l  +lyal+ ++++l+++++s+ +Grr ++ l+l + +l  ++l+ +++ +++l+++  l+G++
  KHJ33553.1  33 VLLTAFTATLGTPIYVGAIQ-IIQHEFHITVTLSVLPSSLYALALGFGALLTSSFSEIYGRRIIYQLTLPGALLL-TALAsISTKFFYLVLFKTLAGIF 129
                 5799999999999******9.9*****************************************************.55553668888************ PP

       MFS_1  99 agalfpagaaliadwfpk.eergrai..gllsagfslGailgpllgglla.sslgWravfyilaivsllafvlfllllpeepperkrkspkeeekgtgp 193
                 ++ ++++g+ ++ d++ + e+r   i   l+ +++  ++ +gp+++  l+ ++ +W++vf i  ++++++++ ++l +pe++ +     +  +    ++
  KHJ33553.1 130 SAPSLTVGVGVLNDMWDPtEDRDGIIvaVLFILTIIWATQIGPVASISLIeTWRNWQWVFHISSLLLVFCVI-AILIIPETYAPQIQR-QYAR----EH 222
                 ******************999999996556666889999***********77778**************966.445555555444444.4444....34 PP

       MFS_1 194 aplvp...............awkallkdpvlw.illialllfffgfsglltllplylqevlglsglllaglllallalvgailallagrlsdr...... 270
                  ++v+               ++ +ll  p l+   l+ +++ +++fs++ ++  l+  +v+g++  +++g+++a l l++  la+ +  l d+      
  KHJ33553.1 223 GGFVEyrrfswyvvvqtisrPLHMLLVEPILFpTGLVLAITQSVIFSYYIAYAYLF-ESVYGFT-QIQVGMTFAPLVLGS-LLAVPVVVLCDKclyqka 318
                 444444444444434444455667777776667677777788889999*******9.*******.788884444444444.336777777777666667 PP

       MFS_1 271 ..........lgrrrrlllallllllaalglal 293
                           + ++ rl+ a+ + +++ ++l++
  KHJ33553.1 319 lrqafdqnrkIAPEERLYPAMMSSFTMPISLFW 351
                 767766666666677777777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       702  (0.0391544); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 2844.00
//
Query:       KHJ33554.1  [L=310]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2211.02
//
Query:       KHJ33555.1  [L=255]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.018   15.4   1.9       0.16   12.3   0.3    2.5  2  ATG_C     Autophagy-related protein C terminal domain
      0.063   13.2   1.2       0.14   12.1   1.2    1.5  1  CK2S      Casein Kinase 2 substrate
        1.5    9.4  11.6        1.4    9.5  10.2    1.7  2  DUF4786   Domain of unknown function (DUF4786)


Domain annotation for each model (and alignments):
>> ATG_C  Autophagy-related protein C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1     0.064   3.8e+02      11      62 ..      66     117 ..      62     121 .. 0.86
   2 ?   12.3   0.3   2.7e-05      0.16      31      92 ..     135     196 ..     128     199 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.064
       ATG_C  11 lreGlqqAysslskglksaaqtilavpsevaeskgakgavkavvravPvavl 62 
                 +r+ ++ A   ++++l+   + + + +s+ ++ +  + ++k+v ++ P  v+
  KHJ33555.1  66 IRDKMEAAAARIKDKLRIILTGVNESNSKTSQTNRKTMTLKKVSHKKPEKVI 117
                 6777889999999999999999999999999999999999999998887666 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 2.7e-05
       ATG_C  31 qtilavpsevaeskgakgavkavvravPvavlrPligateavsktlqGvrnqldpearkese 92 
                 q+ +a++++++++k a+++ ++v+r+ P +  +P++ a+  ++   + v+ ++  e+ k++e
  KHJ33555.1 135 QDSMAIETKNQTKKAAQSSWTEVIRRNPKTHTKPTQTAVTHTAANHKPVSSTITVEETKQDE 196
                 6778999*******************************999999988888888888777766 PP

>> CK2S  Casein Kinase 2 substrate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.2   2.3e-05      0.14       9     107 ..       5     113 ..       3     128 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.3e-05
        CK2S   9 veeqrekWkellsesesll...eslsnlaeqlqalqnvklygtp..lrdfpdlqe.....rLrekqlealeevlakLrekleelqkvrdsleklvrdal 97 
                 +++ ++ +++ + +++++l   + lsn +e+++ + n++l+++    ++f  l e     ++r k  +a+ ++ +kLr  l+ +++ +++ ++  r+++
  KHJ33555.1   5 AQQSDDYYRNSQPNCVKQLsikQDLSNFIEKQARVFNTRLTEARrvIKQFTALYElisdpEIRDKMEAAAARIKDKLRIILTGVNESNSKTSQTNRKTM 103
                 567778888999999999955558*****************99888888888888888899************************************** PP

        CK2S  98 qlyeekadkl 107
                 +l++ + +k+
  KHJ33555.1 104 TLKKVSHKKP 113
                 *998766653 PP

>> DUF4786  Domain of unknown function (DUF4786)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.8   1.1e+04      78      92 ..      13      27 ..       8      55 .. 0.58
   2 ?    9.5  10.2   0.00023       1.4      61     135 ..      92     170 ..      68     194 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.8
     DUF4786 78 snGkPsrvyqwngav 92
                +n +P+ v q++++ 
  KHJ33555.1 13 RNSQPNCVKQLSIKQ 27
                566666666665443 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00023
     DUF4786  61 patetktpfkklpipfvsnGkPsrvyqwngavlkkalkkkpkfasvlaadrnrlldiesiptwrk.....gkaklkkplk 135
                  + +++t++k+++++ vs  kP++v  ++++   + + k+p++++++a + +++++ + +++w +     + ++  kp +
  KHJ33555.1  92 NSKTSQTNRKTMTLKKVSHKKPEKVIDLTTTQERSDMGKRPTDQDSMAIETKNQTKKAAQSSWTEvirrnP-KTHTKPTQ 170
                 3344569********************************************************98666644.33333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2008  (0.111997); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2023.69
//
Query:       KHJ33556.1  [L=497]
Description: putative fungal protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-08   32.4   0.0      1e-07   31.4   0.0    1.5  1  Whi5      Whi5 like


Domain annotation for each model (and alignments):
>> Whi5  Whi5 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   5.6e-12     1e-07       2      25 .]     186     209 ..     186     209 .. 0.98

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 5.6e-12
        Whi5   2 LktRLqlAmyKvqtGwedlsLdel 25 
                 L+tRL++Am Kv  Gw+++s+de+
  KHJ33556.1 186 LRTRLSYAMLKVSYGWQSNSIDEV 209
                 9*********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (497 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1010  (0.0563333); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.21s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3618.42
//
Query:       KHJ33557.1  [L=546]
Description: putative wd repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.9e-13   48.5   2.5      0.013   16.3   0.0    7.4  7  WD40         WD domain, G-beta repeat
    2.5e-08   34.1   0.0          6    7.2   0.0    6.3  7  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    0.00019   21.4   0.3       0.59   10.0   0.0    3.6  4  eIF2A        Eukaryotic translation initiation factor eIF2A
     0.0031   15.6   0.0     0.0096   14.0   0.0    1.7  2  IKI3         IKI3 family
  ------ inclusion threshold ------
      0.031   14.2   0.1         11    6.1   0.0    3.0  3  PD40         WD40-like Beta Propeller Repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.2    0.0047        17      17      38 .]     166     191 ..     127     191 .. 0.64
   2 ?    2.7   0.0     0.072   2.6e+02      14      29 ..     228     243 ..     215     247 .. 0.87
   3 ?    0.6   0.0      0.33   1.2e+03       6      29 ..     313     339 ..     308     340 .. 0.73
   4 ?    3.6   0.0     0.038   1.3e+02      13      37 ..     372     392 ..     363     392 .. 0.85
   5 !   16.3   0.0   3.7e-06     0.013       3      38 .]     397     443 ..     395     443 .. 0.76
   6 !    8.9   0.0   0.00083         3      15      37 ..     463     484 ..     457     485 .. 0.86
   7 ?   -0.1   0.0      0.59   2.1e+03      13      26 ..     519     532 ..     507     540 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0047
                 E....EETTSSEEE.EEETTSEEEEEE CS
        WD40  17 a....fspdgawla.sGsdDgtvriWd 38 
                 a     ++d++ la +Gs D   riW+
  KHJ33557.1 166 AhcafHPRDSNILAaAGS-DALARIWS 191
                 044445566666763567.*******5 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.072
                 EEEEEETTSSEEEEEE CS
        WD40  14 tslafspdgawlasGs 29 
                 t+l++ p+g++la +s
  KHJ33557.1 228 TALSWAPEGQYLAIAS 243
                 7899********9776 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.33
                 EEESSSSEEEEE...EETTSSEEEEEE CS
        WD40   6 tltGHssvtsla...fspdgawlasGs 29 
                 tl  H+ v  l    + ++ +++++G+
  KHJ33557.1 313 TLPSHNLVEQLLqavWTSNDDFIVCGG 339
                 566775565555666999******997 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.038
                 EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriW 37 
                 v++l    ++++la++sd g v+iW
  KHJ33557.1 372 VYDL----HSQLLATASDTGMVYIW 392
                 4566....8899************* PP

  == domain 5  score: 16.3 bits;  conditional E-value: 3.7e-06
                 EEEEEESSSS.EEEEEEETTSSE................EEEEETTSEEEEEE CS
        WD40   3 clrtltGHss.vtslafspdgaw................lasGsdDgtvriWd 38 
                 +++++t+H++ +t l       w                las+++Dg + iW+
  KHJ33557.1 397 PMYVFTAHQGvITQLT------WqslttldptsntkerlLASAGEDGAISIWN 443
                 7899****7756*995......4444444666666888789999********8 PP

  == domain 6  score: 8.9 bits;  conditional E-value: 0.00083
                 EEEEETTSSEEEEEETTSEEEEE CS
        WD40  15 slafspdgawlasGsdDgtvriW 37 
                 ++afspdg +las++   ++ iW
  KHJ33557.1 463 AIAFSPDGEFLASAT-SENLFIW 484
                 689*********998.8888888 PP

  == domain 7  score: -0.1 bits;  conditional E-value: 0.59
                 EEEEEEETTSSEEE CS
        WD40  13 vtslafspdgawla 26 
                 ++sl+++++g+ la
  KHJ33557.1 519 ICSLSWDSEGRRLA 532
                 89*******99886 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.64   2.3e+03      49      76 ..     174     201 ..     164     209 .. 0.79
   2 !    7.0   0.0     0.002       7.2      39      62 ..     225     248 ..     215     279 .. 0.78
   3 !    7.2   0.0    0.0017         6       1      53 [.     230     285 ..     230     296 .. 0.76
   4 ?    1.8   0.0     0.081   2.9e+02      43      90 ..     370     414 ..     312     416 .. 0.73
   5 ?    4.2   0.0     0.015        52      37      67 ..     404     444 ..     373     464 .. 0.62
   6 ?    4.5   0.0     0.012        44      42      60 ..     462     480 ..     448     484 .. 0.86
   7 !    6.9   0.0    0.0021       7.5      33      64 ..     511     541 ..     497     545 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.64
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhsl 76 
                  d ++La a sd   r+ + +s   ++s+
   KHJ33557.1 174 DSNILAAAGSDALARIWSLKSLSSLKSV 201
                  67899******99999998887766665 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.002
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgev 62 
                   + ++L+W p+g+ La+a + +e 
   KHJ33557.1 225 TQATALSWAPEGQYLAIASQPSET 248
                  56799************9876655 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0017
  ANAPC4_WD40   1 lswcptmDLiAlatedgellvfRlng.qrvwtl..eedkedsevrsLaWkpdgklL 53 
                  lsw p+   +A+a++ +e  ++R+++ ++  +l  ++ + ds v +++W+p+g+  
   KHJ33557.1 230 LSWAPEGQYLAIASQPSETGLSRVDFwREDASLvaSNFGIDSPVVNIQWNPSGTAC 285
                  58999999999999999999999986333333344678899999999999999754 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.081
  ANAPC4_WD40  43 sLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  ++ +    +lLa a + g v +    +   +  +++++   +t l+W+
   KHJ33557.1 370 QVVYDLHSQLLATASDTGMVYIWGKDD--PMYVFTAHQG-VITQLTWQ 414
                  555666677788888888777776544..4445556666.48888886 PP

  == domain 5  score: 4.2 bits;  conditional E-value: 0.015
  ANAPC4_WD40  37 edsevrsLaWk..........pdgklLavaysdgevrllda 67 
                  +++ +++L W+           +++lLa a +dg++++ ++
   KHJ33557.1 404 HQGVITQLTWQslttldptsnTKERLLASAGEDGAISIWNI 444
                  55556666664222222222257899999999999999876 PP

  == domain 6  score: 4.5 bits;  conditional E-value: 0.012
  ANAPC4_WD40  42 rsLaWkpdgklLavaysdg 60 
                   ++a++pdg++La a+s++
   KHJ33557.1 462 FAIAFSPDGEFLASATSEN 480
                  5799************987 PP

  == domain 7  score: 6.9 bits;  conditional E-value: 0.0021
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrl 64 
                  e++ ++ e+ sL+W  +g+ La ++++ ++ l
   KHJ33557.1 511 ESTLSEVEICSLSWDSEGRRLAYGMNN-RLAL 541
                  5556778999*************9854.5555 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.2   0.0    0.0098        35     138     162 ..     219     243 ..     206     265 .. 0.79
   2 !    5.2   0.0    0.0049        18     105     156 ..     229     283 ..     223     343 .. 0.59
   3 !   10.0   0.0   0.00017      0.59      94     163 ..     407     478 ..     371     485 .. 0.74
   4 ?   -3.0   0.0       1.5   5.5e+03       5      21 ..     516     532 ..     513     537 .. 0.68

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0098
                 EEEEE-TT--EEEE-TTSSEEEEEE CS
       eIF2A 138 iakaeaanatlvewspdgryvlTat 162
                 ++   a++at + w p+g+y++ a+
  KHJ33557.1 219 LSVSMATQATALSWAPEGQYLAIAS 243
                 5666788999999999999998775 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0049
                 EEEE-TTSSEEEEE-TTSSS-..EEEEEETTTTEEEEEEE.-TT--EEEE-TTSS CS
       eIF2A 105 tiffspkgklvllaGfgnlaG..eleiwdvkkkkkiakae.aanatlvewspdgr 156
                 ++ + p+g+++++a   +  G  ++++w ++     +++   +  + ++w+p+g+
  KHJ33557.1 229 ALSWAPEGQYLAIASQPSETGlsRVDFWREDASLVASNFGiDSPVVNIQWNPSGT 283
                 4555555555555555444443345555554333333333123334455555554 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00017
                 EEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT..TTEEEEEEE-.TT--EEEE-TTSSEEEEEE- CS
       eIF2A  94 viskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvk..kkkkiakaea.anatlvewspdgryvlTatt 163
                 vi++l  q+  t+   ++ k  lla  g+  G+++iw+    ++k+ a++   ++a  + +spdg++++ at+
  KHJ33557.1 407 VITQLTWQSLTTLDPTSNTKERLLASAGE-DGAISIWNIVlpNIKCRASMTMrSTAFAIAFSPDGEFLASATS 478
                 55555555555554444444444444444.59******999999988877651566789**********9997 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 1.5
                 SECEEEEEE-TTTTEEE CS
       eIF2A   5 kadkvklkWnkkGtsll 21 
                 +++ ++l+W+++G  l+
  KHJ33557.1 516 EVEICSLSWDSEGRRLA 532
                 56667777777777664 PP

>> IKI3  IKI3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.0   2.7e-06    0.0096     205     284 ..     221     302 ..     201     333 .. 0.85
   2 ?   -2.5   0.0      0.25   8.8e+02     125     145 ..     463     483 ..     443     489 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2.7e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXX.XXXXX CS
        IKI3 205 lslddskvtIsWRGDgeYfavssleaetgerralrvyeregaLdsvsekvdgleeaLaWrPsGs..liAstqrkkdk.sldvv 284
                 +s+  + + +sW   g+Y+a+ s  +etg    +  +  +  L +++   d+   +++W PsG   li s+q+++++ s +v+
  KHJ33557.1 221 VSMATQATALSWAPEGQYLAIASQPSETG-LSRVDFWREDASLVASNFGIDSPVVNIQWNPSGTacLIISPQNETTDaSITVI 302
                 567788999**************999999.677889999999*99999***************75579999986555244444 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.25
                 XXXXXXXXXXXXXXXXXXXXX CS
        IKI3 125 aaawspdeellalvtgeekvv 145
                 a+a spd+e la +t+e+ ++
  KHJ33557.1 463 AIAFSPDGEFLASATSENLFI 483
                 677788888888887777655 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0      0.01        37      13      29 ..     229     245 ..     227     251 .. 0.84
   2 ?    6.1   0.0    0.0031        11      12      24 ..     462     474 ..     457     474 .. 0.84
   3 ?   -3.0   0.0       2.2   7.9e+03      15      25 ..     523     533 ..     523     533 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.01
                 EEEE-TTSSEEEEEEEC CS
        PD40  13 aPsfSPDGkrlaFsSdR 29 
                 a s+ P G++la++S+ 
  KHJ33557.1 229 ALSWAPEGQYLAIASQP 245
                 569************85 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0031
                 EEEEE-TTSSEEE CS
        PD40  12 gaPsfSPDGkrla 24 
                 +a++fSPDG  la
  KHJ33557.1 462 FAIAFSPDGEFLA 474
                 789******8775 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 2.2
                 EE-TTSSEEEE CS
        PD40  15 sfSPDGkrlaF 25 
                 s++  G+rla+
  KHJ33557.1 523 SWDSEGRRLAY 533
                 68888****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       383  (0.021362); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3842.96
//
Query:       KHJ33558.1  [L=665]
Description: putative glycoside hydrolase family 16 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.4e-224  745.4   0.4   2.8e-224  745.2   0.4    1.0  1  SKN1      Beta-glucan synthesis-associated protein (SKN1)


Domain annotation for each model (and alignments):
>> SKN1  Beta-glucan synthesis-associated protein (SKN1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  745.2   0.4  1.6e-228  2.8e-224       3     501 .]     166     664 ..     164     664 .. 0.96

  Alignments for each domain:
  == domain 1  score: 745.2 bits;  conditional E-value: 1.6e-228
        SKN1   3 llseekekDDylhnpdpeakadkkkkvkdlklldkrgllnvlgllllvlgllllfivlPvltylgkkekestks.eaaeiltkaqvpllsairtslidp 100
                 l+ e+ ekDD+lhnpdp++     k  + +++++krg++nv+gl+l++lg+l+lfi++Pvlt++++     +++ +a   + + ++pll++ rt+lidp
  KHJ33558.1 166 LFPEDVEKDDWLHNPDPND-----KDNDGCDIFTKRGMANVGGLILICLGVLFLFIGYPVLTFVRSIIDPVSSAcAADPNCLSDTLPLLKNQRTGLIDP 259
                 567899*********9933.....344679**********************************776555443336667778899************** PP

        SKN1 101 dtPesaltrkskdgkklkLvfsDefnkegrtfydGdDqfwtavdlhYaatkdlewYdpdavttadGtLelrldafknhdLnyrsGmlqsWnklCftgga 199
                 dtP+sa t+ks+dgk lkLvfsDefn++grtfy+GdD +++avd++Y  t+dlewYdpdavtt+ GtL+l++daf+nh+LnyrsGm+q+WnklCf+gg+
  KHJ33558.1 260 DTPKSAFTKKSNDGKILKLVFSDEFNVDGRTFYEGDDAYFEAVDIWYGVTQDLEWYDPDAVTTSGGTLNLKFDAFQNHNLNYRSGMVQTWNKLCFKGGR 358
                 *************************************************************************************************** PP

        SKN1 200 levsvsLpgkgevsGlWPglWtmGnLgRpGylasteGvWPYsY.dsCDvGitpnqssadGlsylpGqrlsaCtCkgedhpspgvgRgaPeiDileaeve 297
                 le+s+sLpg+g+++G+WPg+W+mGnLgRpGy a+t+G+WPYsY d+CD+Git+nqs++dGls+lpG+rl+aCtC+ edhp+pg++R++PeiD+lea+  
  KHJ33558.1 359 LEASISLPGRGDIQGFWPGFWAMGNLGRPGYPATTDGTWPYSYwDKCDAGITANQSQSDGLSHLPGMRLPACTCSHEDHPTPGKSRSSPEIDALEASSG 457
                 *************************************************************************************************99 PP

        SKN1 298 teke......vgvasqslqvaPfdiwylpdydfveiydksvtalnsyaGgpfqqalsglttlnkewyeeegkkfqkygleykpnddekgyitWfvgdek 390
                 +         +g asqs+q aPfdi+y+pdy+++eiyd+++t++n+y+Ggp+q+alsg+t+ln+ewy  +g+++qkyg+eykp+   kg i+Wfvgde+
  KHJ33558.1 458 FMGPgeyggaTGLASQSFQAAPFDIFYQPDYEYIEIYDHNITSMNNYRGGPYQEALSGITWLNNEWY--DGNAYQKYGFEYKPG--PKGDISWFVGDEY 552
                 98888899999********************************************************..99***********97..99*********** PP

        SKN1 391 twtlkakalgpngnigqRliseepmsiilnlgisnnfaaidwkele..fpatlriDyvRlyqeedeesvgCDPedyptadYiekhkeaYenanltswee 487
                 t+++++++ +pngnigqR i+eepm+ii+n+g+sn+fa++ +++l   +pat+r+Dy+R+yq+e++ +++CDP ++pt+ Yi++h+e Y+n+nlt w++
  KHJ33558.1 553 TFKVDHRSTRPNGNIGQRIIPEEPMAIIINFGMSNSFATVFLHNLAqlMPATMRVDYIRIYQNEND-ELTCDPVGFPTTRYINSHPEPYKNPNLTLWSQ 650
                 *********************************************8889*************9996.8******************************* PP

        SKN1 488 agyefpknklldec 501
                 +gy++pkn+lld+c
  KHJ33558.1 651 TGYSWPKNRLLDKC 664
                 ************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (665 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4651.41
//
Query:       KHJ33559.1  [L=695]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.4e-17   61.8   0.2      2e-16   60.2   0.2    1.9  1  HA2            Helicase associated domain (HA2)
    1.2e-13   51.2   0.0    2.8e-13   50.0   0.0    1.6  1  OB_NTP_bind    Oligonucleotide/oligosaccharide-binding (OB)-f
    1.7e-12   47.7   0.3    7.9e-12   45.5   0.0    2.2  3  Helicase_C     Helicase conserved C-terminal domain
    3.5e-05   24.1   0.1     0.0001   22.6   0.1    1.8  1  AAA_22         AAA domain
    0.00024   20.9   0.3    0.00063   19.6   0.3    1.6  1  DEAD           DEAD/DEAH box helicase
     0.0077   15.8   0.3       0.13   11.9   0.1    2.5  2  cobW           CobW/HypB/UreG, nucleotide-binding domain
  ------ inclusion threshold ------
       0.01   15.5   0.0      0.018   14.8   0.0    1.3  1  AAA_30         AAA domain
      0.027   15.0   0.1       0.12   12.9   0.1    2.1  1  AAA_23         AAA domain
      0.042   14.2   0.0       0.13   12.6   0.0    1.8  1  AAA_19         AAA domain
      0.046   13.0   0.1        0.1   11.8   0.1    1.6  1  Zeta_toxin     Zeta toxin
      0.079   11.0   0.0       0.23    9.5   0.0    1.6  2  Herpes_ori_bp  Origin of replication binding protein
       0.11   11.5   0.1       0.31   10.0   0.1    1.7  1  T2SSE          Type II/IV secretion system protein
       0.21   12.1   1.0        1.9    9.0   0.3    2.7  2  ABC_tran       ABC transporter
       0.22   11.1   0.6       0.68    9.5   0.1    2.1  3  SRP54          SRP54-type protein, GTPase domain


Domain annotation for each model (and alignments):
>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.2   0.2   1.5e-19     2e-16       1     108 []     450     540 ..     450     540 .. 0.85

  Alignments for each domain:
  == domain 1  score: 60.2 bits;  conditional E-value: 1.5e-19
         HA2   1 AlelLvalgALdeegnlT.elGrkmaelPlsprlakmLlaaaeleegcldevitivAalsveeifleeneeekeeeeeeeekakkkrkeeekarrklah 98 
                 AlelL++lgALd+  +lT +lG +mae+ ++p+lak+Ll a+ +  +cl+e++ti+A++s +  ++  ++               ++k++e a+rk+a 
  KHJ33559.1 450 ALELLYSLGALDDYAKLTrPLGVRMAEIAVDPMLAKTLLSASSF--NCLSEILTIAAMISLDGGVWFHHDG--------------EKKRIETAQRKFAT 532
                 89****************99*********************666..**************75444444432..............35677777788888 PP

         HA2  99 kdaegDhltl 108
                 ++  gDhl+l
  KHJ33559.1 533 EE--GDHLML 540
                 88..999976 PP

>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.0   2.2e-16   2.8e-13       1      82 [.     613     690 ..     613     691 .. 0.96

  Alignments for each domain:
  == domain 1  score: 50.0 bits;  conditional E-value: 2.2e-16
                  HHHHHHHHHTTCEEEEEETTCCEEETTTCEEEEE-TTSTTTTT...TSSSEEEEEEEEES.SSEEEEEEEEE-HHHHHHHSTT CS
  OB_NTP_bind   1 lraillaGlypqiarkdpskkdyktartktrvfihpsSvlaknekekepewvvytelvet.tklylrdltaidpawLllfagq 82 
                  +r++l+ G++ + a+++p +  ++ ++++   + hpsS +++     + +wv+++  vet +k+++rd+t+id  wL+++a+ 
   KHJ33559.1 613 IRRCLTTGFFAHAAKMQPDGT-FRNVQGDLVLHAHPSSLMFN----RKADWVIFHAVVETgNKTFIRDVTKIDRSWLVEYAPG 690
                  899*************99997.*****9*************8....**************999****************9985 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       4.4   5.6e+03      57      75 ..     159     177 ..     152     205 .. 0.66
   2 !   45.5   0.0   6.2e-15   7.9e-12       6     110 ..     258     388 ..     251     389 .. 0.86
   3 ?   -2.9   0.0       6.6   8.5e+03      23      51 ..     572     597 ..     560     604 .. 0.55

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 4.4
                 HHHHHHHTTSSSEEEESGG CS
  Helicase_C  57 eileqfnkgesdvLiatdv 75 
                 +il++ ++++ +v+i++  
  KHJ33559.1 159 KILKRRRQNDLRVIISSAT 177
                 5556666666666666544 PP

  == domain 2  score: 45.5 bits;  conditional E-value: 6.2e-15
                 HHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHT........TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS. CS
  Helicase_C   6 llellkleeeggkilifvntidrlek.vklllekk........gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp. 94 
                 +l++ +++e++g+il+f++ ++++ek ++ l e+         +i  ++l++ lp ++++ ++e+  +++++v+ +t++ae +++i+++ +V++ ++  
  KHJ33559.1 258 VLDI-HMKESKGDILVFLTGREEIEKaIESLSEQAailgpkaqQIMPLPLYAGLPIEKQLYVFEEAPEDTRKVIFSTNIAEASVTIDGIVFVVDSGFLk 355
                 4444.6899***************99977774555566666669****************************************************997 PP

                 ...SSH..............HHHHHHHTTSSST CS
  Helicase_C  95 ...rnv..............tsyiqriGRtgRa 110
                    +n+              +s+ qr+GR+gR 
  KHJ33559.1 356 lraYNPtngidiltvtpiskASATQRAGRAGRT 388
                 76644488889999999999************6 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 6.6
                 ESSHHHHHHHHHHHHHTTSTEEEESTTST CS
  Helicase_C  23 vntidrlekvklllekkgikvavlhgelp 51 
                 vn + +l+  ++l e++gi+v    ++ +
  KHJ33559.1 572 VNIRAQLK--RYL-ERFGINVDETLSSRK 597
                 33333443..555.889999866555554 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.1     8e-08    0.0001       7     127 ..      38     173 ..      33     182 .. 0.78

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 8e-08
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaee.erpevvfvtlpsstsskdllrellralglelka..................erlsseell.ealeqa 85 
                 +++v+G++G+GKTt l ++leq        + ++ +++ vt p     ++++++++ ++g el +                  + l+   ll e l + 
  KHJ33559.1  38 VTIVVGQTGSGKTTQLPKFLEQG------GWcNQGKIIAVTQPRRLAATTVATRVAGEYGCELGKevgysirfedvtssatriKFLTDGLLLrEVLVDP 130
                 789*******************6......346678888999999999*************999999*******88888777774444444444677777 PP

      AAA_22  86 lraravielliiDEaqh..lrs....eealeeLrsllnlsrkgvqliL 127
                 l +r+   +++iDEa+   l s      +l+++ ++    + ++++i+
  KHJ33559.1 131 LLSRYN--VIMIDEAHErtL-StdilLGVLKKILKRRR--QNDLRVII 173
                 777777..********9444.55667777777766655..77777765 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.3   4.9e-07   0.00063      17     170 ..      39     179 ..      26     184 .. 0.67

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 4.9e-07
                 EEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTT.CSEEEEEHHHHHHHH.H CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx.x RF
        DEAD  17 vlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldng.vdivvgtpgrlddll.s 113
                  +v ++TGsGKT+     + q  +    ++g+ + +  P r  a  +++++   ++y ++++    ++v ++   +++ ++ ++i + t g l++ +  
  KHJ33559.1  39 TIVVGQTGSGKTTQLPKFLEQGGW---CNQGKIIAVTQPRRLAATTVATRVA--GEY-GCELG---KEVGYSIRFEDVTSSaTRIKFLTDGLLLREVlV 128
                 58999*******985555555443...4666555555565555555555553..333.22222...234445555555433499**********95524 PP

                 CTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 114 tgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp 170
                 +    ls+ +++ +DEa++   +   d +  +l+++ +   +  ++ +vi+ SATl+
  KHJ33559.1 129 DPL--LSRYNVIMIDEAHERTLS--TDILLGVLKKILKRRRQ--NDLRVIISSATLQ 179
                 455..*************97775..78888888888544444..4456*******98 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.1    0.0001      0.13       1      31 [.      37      71 ..      37      73 .. 0.84
   2 ?    1.0   0.0      0.22   2.8e+02     100     121 ..     330     351 ..     321     382 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.0001
                EEEEEEESTTCCHHHHHHHHH....CT--SS-EEE CS
        cobW  1 pvtvltGflGsGKTtLlnhll....enraglklav 31
                pvt+++G  GsGKTt l + l     +++g+ +av
  KHJ33559.1 37 PVTIVVGQTGSGKTTQLPKFLeqggWCNQGKIIAV 71
                79****************99976666777777776 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.22
                 HTTSHHHHHCCCECEEEEEEET CS
        cobW 100 afteeelksdltldavvavvDa 121
                 +f+++  ++++t+d++v+vvD+
  KHJ33559.1 330 IFSTNIAEASVTIDGIVFVVDS 351
                 5667777889***********8 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.4e-05     0.018      15      99 ..      33     145 ..      29     182 .. 0.61

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.4e-05
      AAA_30  15 tsgdrvavltGpAGtGKttalkal..reaweaaggrviglAptgkaAkvLa............eelg..ieastiakllkrlk.............gra 84 
                 t++  v++++G  G+GKtt l +   +  w ++g+ +++  p   aA ++a            +e+g  i+ + + +  +r k             +  
  KHJ33559.1  33 TETYPVTIVVGQTGSGKTTQLPKFleQGGWCNQGKIIAVTQPRRLAATTVAtrvageygcelgKEVGysIRFEDVTSSATRIKfltdglllrevlvD-P 130
                 5566799**************9986666899999767666676667777774444454444442333222333333333233344445679998852.4 PP

      AAA_30  85 rlepgtllivDEagm 99 
                  l++ +++++DEa  
  KHJ33559.1 131 LLSRYNVIMIDEAHE 145
                 566679999999964 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   9.4e-05      0.12      11      35 ..      26      52 ..      22     301 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 9.4e-05
      AAA_23 11 rdqeidF..skgltlItGpNGaGKTTi 35
                +d+ + +    ++t+++G++G+GKTT 
  KHJ33559.1 26 KDELLYLteTYPVTIVVGQTGSGKTTQ 52
                555555554559**************5 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   9.9e-05      0.13      11     122 ..      37     154 ..      31     172 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 9.9e-05
      AAA_19  11 kvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgr.Aakelrerlaalgae.....................atTiHrlalldfddlltea 87 
                 +v +v++  G+GKT+ l + ++   + ++    +i++v+  +r Aa  +++r+    +e                     at i               
  KHJ33559.1  37 PVTIVVGQTGSGKTTQLPKFLEQGGWCNQG---KIIAVTQPRRlAATTVATRV---AGEygcelgkevgysirfedvtssATRIK-------------- 115
                 6889**************999999988865...67777755554888888888...33335567666666555554432111111.............. PP

      AAA_19  88 lelle......eaeeekklqeee.llivDEfqdvdelqyrLl 122
                   +l       e    ++l +++ ++++DE+ + +     Ll
  KHJ33559.1 116 --FLTdglllrEVLV-DPLLSRYnVIMIDEAHERTLSTDILL 154
                 ..2223333323333.45557777999**9987665444444 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   8.1e-05       0.1      12      49 ..      33      71 ..      23      76 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 8.1e-05
  Zeta_toxin 12 sqerPklillgGqpGAGKselaellkdele..rqgnvvrl 49
                ++ +P+  +++Gq+G+GK++ + ++ ++ +  +qg+++ +
  KHJ33559.1 33 TETYPVT-IVVGQTGSGKTTQLPKFLEQGGwcNQGKIIAV 71
                5566765.5679***********99998877777777765 PP

>> Herpes_ori_bp  Origin of replication binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00018      0.23      47      99 ..      34      87 ..      27     144 .. 0.77
   2 ?   -1.9   0.0      0.48   6.1e+02     463     503 ..     167     205 ..     152     309 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00018
  Herpes_ori_bp 47 rtrpvlvvRApmGsGkttALiewLkev.ldsedlsvlvvsCRrsFtntlserfn 99
                   +t pv++v    GsGktt L ++L++   +++ + + v   Rr  + t+++r++
     KHJ33559.1 34 ETYPVTIVVGQTGSGKTTQLPKFLEQGgWCNQGKIIAVTQPRRLAATTVATRVA 87
                   688*********************985267888888888889999999998876 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.48
  Herpes_ori_bp 463 nkikvrldGkdlplsaedFcsFlsilredalaaerklrelr 503
                    n ++v +     +l+ae+F++F+ + + d+ a +++  + r
     KHJ33559.1 167 NDLRVIIS--SATLQAEAFLRFFMENHSDSSALNSDAETSR 205
                    33333333..3466677777777777777776666655444 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.1   0.00025      0.31     127     152 ..      34      59 ..      21      83 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00025
       T2SSE 127 rerglilvsGgTgsGKttllyallke 152
                 +++ + +v G TgsGKtt l   l++
  KHJ33559.1  34 ETYPVTIVVGQTGSGKTTQLPKFLEQ 59 
                 4566789***********99877765 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.3    0.0015       1.9      13      43 ..      38      69 ..      33     213 .. 0.77
   2 ?    0.1   0.0      0.83   1.1e+03      79     123 ..     561     621 ..     514     628 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0015
                EEEEEESTTSSHHHHH.HHHTTSS--SEEEEE CS
                xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLl.kllagllkpteGeil 43
                ++ +vG++G+GK+t l k l +    ++G+i 
  KHJ33559.1 38 VTIVVGQTGSGKTTQLpKFLEQGGWCNQGKII 69
                5679**********662555555566899982 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.83
                 H...........HHHTCHHHHHHHSTTGG.....TTCBGESTTSGGS-HHHHHHHHHHHHH CS
                 x...........xxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  79 n...........esdeeiekalsklglke.....lkdtvvksspssLSgGqkqrvalaral 123
                 n           + +++++++l+++g++       +++++++s   LS+ ++ r +l   +
  KHJ33559.1 561 NfinfkamlravNIRAQLKRYLERFGINVdetlsSRKDKQSNSIGGLSKSEQIRRCLTTGF 621
                 2444444555557778888899999988766666566666666699999999888887655 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1   0.00053      0.68       3      25 ..      38      60 ..      36      99 .. 0.77
   2 ?   -2.9   0.0       3.5   4.4e+03      83     127 ..     134     180 ..     131     185 .. 0.63
   3 ?   -2.8   0.0       3.2     4e+03      71     139 ..     254     322 ..     233     332 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00053
                EEEEEESTTSSHHHHHHHHHHHH CS
       SRP54  3 villvGlqGaGKTttlaKLaall 25
                v+++vG +G+GKTt l K  ++ 
  KHJ33559.1 38 VTIVVGQTGSGKTTQLPKFLEQG 60
                6899*************987665 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3.5
                 TSSEEEEEE--.SSTTHHHHHHHHHHHHHHH.SSSEEEEEEETTBHT CS
       SRP54  83 kidvvlvDTaG.rlqndkelmeelkkikkvv.kpdevllvldattgq 127
                 +++v+++D a  r  + + l+  lkki k   ++d  +++ +at++ 
  KHJ33559.1 134 RYNVIMIDEAHeRTLSTDILLGVLKKILKRRrQNDLRVIISSATLQA 180
                 68899999885255566667788888877662444455555555554 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 3.2
                 HHHHHHHHHHHTTSSEEEEEE--SSTTHHHHHHHHHHHHHHH.SSSEEEEEEETTBHTHHHHHHHHHHHH CS
       SRP54  71 vakeavekakeekidvvlvDTaGrlqndkelmeelkkikkvv.kpdevllvldattgqeavkqakaFkea 139
                  ++  ++   +e+   +lv  +Gr +++k+ +e l++ + ++  +++ ++ l   +g    kq + F+ea
  KHJ33559.1 254 AVQTVLDIHMKESKGDILVFLTGREEIEKA-IESLSEQAAILgPKAQQIMPLPLYAGLPIEKQLYVFEEA 322
                 444444444455555566667788888765.566777666663344566666666666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (695 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       488  (0.0272185); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 4709.21
//
Query:       KHJ33560.1  [L=383]
Description: putative copii-coated vesicle protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-35  122.5   0.1    3.6e-35  121.8   0.1    1.3  1  COPIIcoated_ERV  Endoplasmic reticulum vesicle transporter
    1.4e-22   79.8   0.0    2.3e-22   79.1   0.0    1.4  1  ERGIC_N          Endoplasmic Reticulum-Golgi Intermediate Com


Domain annotation for each model (and alignments):
>> COPIIcoated_ERV  Endoplasmic reticulum vesicle transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.8   0.1     4e-39   3.6e-35      50     216 ..     190     347 ..     177     350 .. 0.88

  Alignments for each domain:
  == domain 1  score: 121.8 bits;  conditional E-value: 4e-39
  COPIIcoated_ERV  50 kkegCrikGklevnkvaGnfhi.apgksfqeekrhvhdlssyekeklnfsHtihkLsfgeelpgekknPLdgtkkeeeekalmfqYflkvvptk 142
                        ++Cri G+l+vnkv G+fhi a g+ + e ++h+       ++ +nfsH+i++Lsfge +p+   nPLdgt +++e++  ++qYf+++vpt 
       KHJ33560.1 190 VGDSCRIFGSLDVNKVLGDFHItARGHGYLEFGNHLD------HNAFNFSHIINELSFGEYYPNL-LNPLDGTISTSEHHFQRYQYFVSIVPTI 276
                      3489*****************9456888989888886......468*****************99.5*******9999**************** PP

  COPIIcoated_ERV 143 yekl...dkkkietnqysvtehersleggkdesekglPGvffsYeisPlkvivkeerksflhfltslcaiiGGvltv 216
                      y+     +++ i+tnqy vt +++ +++       ++PG+ff+Y+i Pl ++++e r+ fl+fl++++ +++G+l+ 
       KHJ33560.1 277 YSIDtpySNNVITTNQYAVTDQSQVVDEF------SVPGIFFKYDIEPLLLETEEVREGFLQFLVKVVNVFSGALVA 347
                      *976432345799**********999974......59************************************9865 PP

>> ERGIC_N  Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.1   0.0   2.6e-26   2.3e-22       1      89 [.      21     108 ..      21     110 .. 0.98

  Alignments for each domain:
  == domain 1  score: 79.1 bits;  conditional E-value: 2.6e-26
                 XXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXX-EEEEEE--S--SEEEEEEEEEE.SS-GGGEEEEEEETTECE CS
     ERGIC_N   1 lrrfDafpKvpedltqktlsGgiislvcillilfLllselteylttevkeelvvdksrsekleinlditfpalpCellsldvqDesgeh 89 
                 +r+fDafpK + ++ ++t+ Gg +++++++++ +L++se++++++++  ++++++k  +++++inld+ + a++C  ++++vqD++g++
  KHJ33560.1  21 VRAFDAFPKAKPEYVTQTSGGGKWTVAMLIIASILVISEFKDWWHGYEIHSFSIEKGIGHDMQINLDMVI-AMSCPDVHINVQDAAGDR 108
                 589***********99******************************************************.****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2814.72
//
Query:       KHJ33561.1  [L=154]
Description: hypothetical protein EV44_g6357 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-05   25.1   0.6    0.00066   20.1   0.6    2.1  1  NuiA      Nuclease A inhibitor-like protein
  ------ inclusion threshold ------
       0.15   12.2   1.0       0.28   11.4   1.0    1.4  1  RloB      RloB-like protein


Domain annotation for each model (and alignments):
>> NuiA  Nuclease A inhibitor-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.6   7.4e-08   0.00066       3     102 ..      38     125 ..      36     154 .] 0.63

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 7.4e-08
                 HHHHHHHHHTTS-EESSSEE--EEEEESS-SSSSSTTHHHHHHT-TTTSSCEEE-HHHHTTCTT--SSTS-HHHHHHHHHHHHHHHHHTTHSSEEEEEE CS
        NuiA   3 lleqLeeltegLLymSeSdypfeviswevdakeltkekllketghpadtpvesveldeflrnalteeewyeeeekeeaqrfqtlvklLksnLtdlkvyR 101
                 + e L+++t +  y+S++d+pf ++ ++v+    ++  ++k+++hp+ t+ e +        +++ ++w+++ + +  ++  t++++ ++  ++++vy+
  KHJ33561.1  38 IPEALQQATLDAYYISDTDEPFVPVVLKVKDGMPDEISFAKLVNHPEPTNAEVQ--------IMDTNKWDPHGQYK--KIIDTVKEVVQN--EEIRVYQ 124
                 6789**************************989999999999999877766654........33344554443322..333333333333..2455555 PP

                 E CS
        NuiA 102 v 102
                 +
  KHJ33561.1 125 I 125
                 4 PP

>> RloB  RloB-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.0   3.1e-05      0.28      13     112 ..       5     137 ..       2     143 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.1e-05
        RloB  13 iYFkalkelrrerkina....gsntrsesekkksnpkklvekaiel................................kkekyeeeydkvwcVfDrDks 75 
                  Y+++l++ ++  ++++    ++ + +  +++ + p++l +                                     k  ++ e+++  + ++D++  
  KHJ33561.1   5 DYLNFLNKANEI-DVQNsngsKRLQLKSLDQSVEIPEALQQ----AtldayyisdtdepfvpvvlkvkdgmpdeisfaKLVNHPEPTNAEVQIMDTN-- 96 
                 677777644444.2222344332332222333333333333....1444588888888888888888888888888885566677777778899999.. PP

        RloB  76 kdfeaeaqkedvkeaikeakkk.....iklavSnpcFElWll 112
                  + + + q++++ +++ke  ++     +++  Sn + E+Wl+
  KHJ33561.1  97 -KWDPHGQYKKIIDTVKEVVQNeeirvYQIFLSNITSEYWLV 137
                 .5554467777777777777778888**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1184.89
//
Query:       KHJ33562.1  [L=479]
Description: putative set domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
       0.01   16.2   0.0      0.022   15.2   0.0    1.6  1  SET           SET domain
       0.12   11.2   0.0       0.19   10.5   0.0    1.3  1  Oxysterol_BP  Oxysterol-binding protein


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   2.4e-06     0.022     116     169 .]     189     261 ..      74     261 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 2.4e-06
                 EEEECCC....................GTTGGGCEEXSSSSEEEEEEEE.TTSSEEEEEESSXBXTTEEEEEXTT CS
                 xxxxxxx....................xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET 116 lksgnga....................gplarflNHsCdpNcnltvqnv.lrgprvavfAtrdIkkGeEltidYg 169
                 lk  +++                    +p ++++NHs +pN   ++++  ++g  + ++   + +++ E+ti+Yg
  KHJ33562.1 189 LKLHDWIqldawfrsrsldlpplgecmAPCIDMVNHSNEPNS--YYESTlEGGIALLLRPHVELEPNSEITITYG 261
                 4444444666666666666677777779**************..655544566666667777889*********8 PP

>> Oxysterol_BP  Oxysterol-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   2.1e-05      0.19      94     212 ..     164     285 ..     154     368 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 2.1e-05
                   CEEEEEEEEEETTTTEEEEEEEECTEEEEEEEEEEEEE-SSEEEEEE-SEEEEEE.....EEESEEEEEEE--EEEEE-TTTTS-EEEEEEEEEEEE CS
  Oxysterol_BP  94 kgfrfiaEQVsHhPpvsAfhaesegweldgeikvkskflgkslevkpeGtahlel.....lkksgehYtwtkpttivhniivgklwvelsgeveitn 185
                   ++f+f++E +   P    ++ e+++++l+  i+++ +f+ +sl++ p G+++        + ++ ++Y  +  +  +  ++   + +e   e++it 
    KHJ33562.1 164 EEFEFLTEVTRELPWCQKYWWEADKLKLHDWIQLDAWFRSRSLDLPPLGECMAPCidmvnHSNEPNSYYESTLEGGIALLLRPHVELEPNSEITITY 260
                   7899*********************************************996655443532346677888888888999999999999999999998 PP

                   TTT--EEEEEEE---SSS---SSEEEE CS
  Oxysterol_BP 186 hstgdkakleFkkkglfsskksnkveg 212
                    +t+++a++ ++ +g++ +++s+ ++ 
    KHJ33562.1 261 GETKSHAEMLYS-YGFI-DQESKILSL 285
                   88*******999.9988.455554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       513  (0.0286129); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3401.78
//
Query:       KHJ33563.1  [L=590]
Description: putative carboxylesterase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-92  309.6   0.2    4.1e-85  286.6   0.1    2.0  2  COesterase     Carboxylesterase family
    1.2e-10   41.6   0.1    2.1e-10   40.8   0.1    1.4  1  Abhydrolase_3  alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> COesterase  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  286.6   0.1   4.6e-89   4.1e-85       3     326 ..      31     368 ..      29     384 .. 0.89
   2 !   21.5   0.0     1e-08   9.3e-05     389     498 ..     385     492 ..     373     505 .. 0.86

  Alignments for each domain:
  == domain 1  score: 286.6 bits;  conditional E-value: 4.6e-89
                 SEEEETTEEEEEEEEEESTCSEEEEEEEEESSB---GGGTTS--BE----SSEEECBS---BESEECSSSSSCGHHCHHH................... CS
  COesterase   3 pvvetslGkvrGkrvklksekevdaFlGiPYAepPvgelRFkkPepaepwtgvrdAtkfspaCpqnaeksekeekeleaw................... 82 
                 ++v+ts G+v G +   +  +ev  +lGiPYA+pPvg+lRF++Pe+  + + +++Atkf+p+C+ +    e+ + e+  +                   
  KHJ33563.1  31 QTVSTSSGQVTGHDAGNN--NEVSEYLGIPYAKPPVGNLRFAAPEK-FESNAPINATKFAPSCYATPGSNETATPEQLLKanltsqvkeiqtiytdnnq 126
                 689************944..48************************.555779***********98876666665544447799*************** PP

                 BES---EEEEEE.ESSSSSTTSSEEEEEEE--STTTS-BGCG..S-THHHHHHHTSEEEEE----HHHHH-B-SSTTSBS-HHHHHHHHHHHHHHHHGG CS
  COesterase  83 vsEDCLyLnvyt.PkekkeakkklPVlVwihGggfqtgsase..ydgsaLaaegnvivVtinYRlGvlGFlstgdeeapGNvGllDqvlALrWVkenIa 178
                  sEDCLyLnv+t P+    ++kk  V+Vwi+Gg+f++gs s   y+g+++aa ++v+vV++nYRl+++GF +    + + NvG+lDq+lAL+WV++nI+
  KHJ33563.1 127 PSEDCLYLNVWTkPQV--GERKK-AVMVWIYGGAFTFGSTSItaYSGRNFAALEDVVVVSMNYRLNIFGFPAH--PNGTYNVGILDQRLALEWVRDNIE 220
                 ************7754..34444.8***************9888***************************99..67899******************* PP

                 GGTEEEEEEEEEEETHHHHHHHHHHHSGGGTTSBSEEEEES--TTSTTTSBSH..HHHHHHHHHHHTTS..-CSSHHHHHHHHHCS-HHHHHHCCGGSS CS
  COesterase 179 sFGGdpervtlfGesAGaasvsllllsplsrglfkraIlqSGsalspwaiqkk..arkrakklakkvgc..kassskelveclrsksaeelldaqekal 273
                 +FGGd +r+tlfG+sAG+asv++++    +    k +IlqSG+ +s    +++  a k   +  k++gc    s +++l++c+r+ks +++++a     
  KHJ33563.1 221 KFGGDASRITLFGQSAGSASVDYHSYAWATDPIAKAYILQSGTVFSWGLPNSQsmASKAWFTTSKNLGCgdAFSPQDKLLSCMRTKSPDDIYKAFPV-- 317
                 ********************************************99988888899999999********86667777******************88.. PP

                 SSSSTTC-SSS-B--SSSSSS-HHHHHHCGC.CSEEEEEEETTTTHHHHCCHST CS
  COesterase 274 easssklvsfaPvvdgdflpekPeellkseg.kvplliGvnkdegllflaylld 326
                   + s l +f+P+vd++++ ++ ++   ++  + p+l+G n+ eg lf + ++ 
  KHJ33563.1 318 GLPGSILGPFVPTVDNTVIFSNYSD---RKPaNLPVLVGNNDYEGGLFRTEYVI 368
                 89999***********999943333...32359**************9887665 PP

  == domain 2  score: 21.5 bits;  conditional E-value: 1e-08
                 HTHHHHHHHHHHHHHTT-SEEEEEEE--STTSSSTTTGSSBTTTTHHHHTTGGGTSGCSS-HHHHHHHHHHHHHHHHHHHHSSTTS.TTSS----B.TT CS
  COesterase 389 lfkapvlrtaklhasrgspvYlYsfdyrnssskkpkwmgvvhgdeleyvfglpllekeeftkedeklsrkmmtywtnFaktgnPnk.eeeekWpkytke 486
                  f++p+++ a++  + ++p + Y++     + +  ++ g+ h+ e++++f+    ++   t  +   ++ m   w+ Fak+  P++   e  Wp y++ 
  KHJ33563.1 385 EFTCPSSDRANASLAIKAPLWRYRYMGVFPNLELSPYSGSWHAAEVPLLFNEMPKTSP-STPFEVYTAKYMRGAWSAFAKN--PTNgLIEYGWPMYDPT 480
                 599**********************99998877778**************98777555.4455****************96..54446999******** PP

                 TBEEEEESSSSS CS
  COesterase 487 eekylkinlkpk 498
                 ++++++i+++++
  KHJ33563.1 481 KDTLVRIGNNNS 492
                 ********9986 PP

>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.1   2.4e-14   2.1e-10       1      89 [.     150     245 ..     150     303 .. 0.80

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 2.4e-14
                    EEEE--STTTS--TTTTHHHHHHHHHHHTSEEEEEE---T.......TTS-TTHHHHHHHHHHHHHHHTHHHHTETTCEEEEEEETHHHHHHHHHH CS
  Abhydrolase_3   1 lvyfHGGGfvlgsldthdalcrelakelgavvvsvdYrlA.......PehpfPaavedalaalrwlaeqawelgadpsrivlaGdSaGGnlaaava 89 
                    +v++ GG+f++gs +      r++a+  ++vvvs++Yrl        P+  +   + d   al+w++++ +++g d+sri+l+G+SaG   + + +
     KHJ33563.1 150 MVWIYGGAFTFGSTSITAYSGRNFAALEDVVVVSMNYRLNifgfpahPNGTYNVGILDQRLALEWVRDNIEKFGGDASRITLFGQSAGSASVDYHS 245
                    799************************************66666334666699****************99*****************76555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (590 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       308  (0.0171789); expected 358.6 (0.02)
Passed bias filter:                      273  (0.0152267); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4161.06
//
Query:       KHJ33564.1  [L=428]
Description: putative pp-loop atpase superfamily protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.5e-18   64.4   3.5    4.5e-18   64.4   3.5    4.2  5  zn-ribbon_14   Zinc-ribbon
    7.1e-17   61.8   0.0    1.4e-16   60.8   0.0    1.5  1  ATP_bind_3     PP-loop family
  ------ inclusion threshold ------
      0.052   12.3   0.0       0.12   11.2   0.0    1.6  2  tRNA_Me_trans  tRNA methyl transferase
        4.5    6.9  13.1      0.079   12.5   1.0    3.4  3  RecR           RecR protein


Domain annotation for each model (and alignments):
>> zn-ribbon_14  Zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.4      0.15   6.7e+02       2       7 ..       5      10 ..       4      12 .. 0.84
   2 ?    0.1   0.2      0.13   5.9e+02      12      19 ..      23      30 ..      22      32 .. 0.75
   3 ?    1.1   0.2     0.062   2.8e+02       1       8 [.     139     146 ..     139     152 .. 0.82
   4 ?   -4.0   0.4       2.4   1.1e+04       9      16 ..     278     285 ..     278     285 .. 0.84
   5 !   64.4   3.5     1e-21   4.5e-18       1      32 []     373     404 ..     373     404 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.15
  zn-ribbon_14  2 kCerCG 7 
                  +Ce+C 
    KHJ33564.1  5 NCEKCK 10
                  8****6 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.13
  zn-ribbon_14 12 qkiCkACv 19
                  qk+Ck C 
    KHJ33564.1 23 QKLCKRCF 30
                  77888775 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.062
  zn-ribbon_14   1 gkCerCGy 8  
                   g+C+ CG 
    KHJ33564.1 139 GNCTYCGV 146
                   79*****7 PP

  == domain 4  score: -4.0 bits;  conditional E-value: 2.4
  zn-ribbon_14   9 lSSqkiCk 16 
                   lS+++ C+
    KHJ33564.1 278 LSNNSNCQ 285
                   69999998 PP

  == domain 5  score: 64.4 bits;  conditional E-value: 1e-21
  zn-ribbon_14   1 gkCerCGylSSqkiCkACvLLegLnkgrpkla 32 
                   g+C +CGy+SSq+ CkAC+LLegLnk+rpk++
    KHJ33564.1 373 GTCVKCGYMSSQETCKACNLLEGLNKNRPKIE 404
                   69****************************95 PP

>> ATP_bind_3  PP-loop family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.8   0.0     3e-20   1.4e-16       2     167 ..      54     233 ..      53     247 .. 0.87

  Alignments for each domain:
  == domain 1  score: 60.8 bits;  conditional E-value: 3e-20
                 EEEE--SCHHHHHHHHHHHHHCTTTTT..EEEEEEEE-SSSTCHHHHHHHHHHHHHHTT-EEEEEE--H..........HHCTTSTCCCHHHHHHHHHH CS
  ATP_bind_3   2 vlvAvSgGlDSmaLllllaklkkklgi..klvaihvdhglreeskeeaelvkelckklnikleiekvdv..........akkkgknleeaARelRYevl 88 
                 ++++ SgG DS++   +l++l+++ +   +l+++ +d g++   ++  e+vk+ + +++++l+i   d           ++  +k+  +    +R ++l
  KHJ33564.1  54 IAIGASGGKDSTVVASVLKTLNERYHYglDLILLSIDEGIKGYRDDSLETVKRNAIQYEMPLKIVGYDElygwtmdqvvEAVGKKGNCTYCGVFRRQAL 152
                 789******************99877777999**********************************9999988887666344455566677899***** PP

                 HHCHHCCT.CEEE---BHHHHHHHHHHHHCCT--CCHHH-..S-SEEEETTCCEE-CCCT--HHHHHHHHHHTT---B--C CS
  ATP_bind_3  89 kealkkegievlllAhhadDqaEtfllrlargsglaglag..ikeaseiasirlvRPlLkvskeeleeylkekkikwveDe 167
                 ++ +k  gi++++++h+adD aEt++++l rg  ++   +  i +  +++++r   Pl   + +e+  y+++kk++++  e
  KHJ33564.1 153 DRGAKMLGITHVVTGHNADDLAETIIMNLLRGDLPRLARStnIITGDKLSEVRRSKPLKYAYEKEIVLYAHHKKLDYFSTE 233
                 *********************************99888772244556677888888*********************9765 PP

>> tRNA_Me_trans  tRNA methyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   2.7e-05      0.12       2     127 ..      53     171 ..      52     188 .. 0.70
   2 ?   -3.3   0.0      0.64   2.9e+03     248     292 ..     310     352 ..     300     379 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.7e-05
  tRNA_Me_trans   2 kvvvalSgGVDSsvaaallk...eqgyevigvflklweeedeegkeccaeedlkdaervaeklgiplevvdfekeykekvfeefleey.eeGrTPn 93 
                    +++++ SgG DS+v+a +lk   e+++    ++l  ++e      +   ++ l++++r a + ++pl++v + + y  + +++++e+  ++G+   
     KHJ33564.1  53 RIAIGASGGKDSTVVASVLKtlnERYHYGLDLILLSIDE---GI-KGYRDDSLETVKRNAIQYEMPLKIVGYDELYGWT-MDQVVEAVgKKGN--- 140
                    7999************99872214444444444444444...33.55788999*******************9999654.5666665413443... PP

  tRNA_Me_trans  94 PdvlCNkeiKfgallekakeelgadalatGHYar 127
                     +  C    + +al + ak  lg+  ++tGH a 
     KHJ33564.1 141 -CTYCGVF-RRQALDRGAKM-LGITHVVTGHNAD 171
                    .7788643.44455555555.8888888888775 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 0.64
  tRNA_Me_trans 248 agaeeplyVvekdakkntvlvgkgedeealaskklrvkelnwlae 292
                    + +++ +  +ek++++n+  v++g  +e   s ++++++ n +++
     KHJ33564.1 310 GASGGEMILLEKKLQENEKAVSNG--TELFSSLAITISQNNITEK 352
                    555666666777777777777773..3444444455555554443 PP

>> RecR  RecR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.4     0.054   2.4e+02      17      25 ..      24      32 ..      10      38 .. 0.81
   2 ?   -1.0   0.0      0.29   1.3e+03      11      26 ..     133     148 ..     129     152 .. 0.69
   3 ?   12.5   1.0   1.8e-05     0.079      12      35 ..     368     391 ..     366     392 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.054
                EE-TTT--E CS
        RecR 17 rhCsrCgnl 25
                + C+rC+ +
  KHJ33564.1 24 KLCKRCFIF 32
                78****976 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.29
                 HHHHH-EE-TTT--EE CS
        RecR  11 eakekvrhCsrCgnlt 26 
                 ea  k + C  Cg + 
  KHJ33564.1 133 EAVGKKGNCTYCGVFR 148
                 5555667899999775 PP

  == domain 3  score: 12.5 bits;  conditional E-value: 1.8e-05
                 HHHH-EE-TTT--EESSSS-CCCC CS
        RecR  12 akekvrhCsrCgnlteedlCaICs 35 
                  +++++ C +Cg ++ ++ C  C+
  KHJ33564.1 368 FRQTLGTCVKCGYMSSQETCKACN 391
                 689999*****************5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (428 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       940  (0.052429); expected 358.6 (0.02)
Passed bias filter:                      602  (0.0335769); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3215.89
//
Query:       KHJ33565.1  [L=912]
Description: putative wd repeat domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-21   76.6   9.7     0.0023   18.7   0.0    8.0  8  WD40             WD domain, G-beta repeat
    0.00073   19.8   0.1        8.9    6.7   0.0    4.4  4  ANAPC4_WD40      Anaphase-promoting complex subunit 4 WD40 do
     0.0012   18.7   0.0     0.0089   15.9   0.0    2.5  2  Exo_endo_phos_2  Endonuclease-reverse transcriptase
  ------ inclusion threshold ------
      0.041   12.9   0.3       0.78    8.6   0.1    2.9  3  Ge1_WD40         WD40 region of Ge1, enhancer of mRNA-decappi
      0.047   13.7   0.1        2.4    8.2   0.0    3.3  3  BBS2_Mid         Ciliary BBSome complex subunit 2, middle reg


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.2   1.6e-06    0.0058      10      37 ..     258     284 ..     248     285 .. 0.82
   2 !   18.7   0.0   6.4e-07    0.0023       2      37 ..     320     355 ..     319     356 .. 0.87
   3 !   15.0   0.0   9.6e-06     0.035       2      38 .]     361     398 ..     360     398 .. 0.81
   4 !    9.8   0.0   0.00043       1.5      11      38 .]     412     439 ..     402     439 .. 0.82
   5 ?    1.4   0.0       0.2     7e+02      13      37 ..     467     499 ..     450     500 .. 0.60
   6 !   10.3   0.0   0.00029         1       5      37 ..     508     543 ..     504     543 .. 0.80
   7 ?   -1.2   0.0       1.3   4.7e+03       6      16 ..     560     571 ..     556     579 .. 0.67
   8 ?    1.1   0.0      0.23   8.4e+02      18      36 ..     637     655 ..     625     657 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.6e-06
                 SSSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  10 HssvtslafspdgawlasGsdDgtvriW 37 
                    ++++ fs dg++la+++ D+ vr+W
  KHJ33565.1 258 N-AIWAMEFSLDGRYLATAGCDHIVRVW 284
                 3.59************97766******* PP

  == domain 2  score: 18.7 bits;  conditional E-value: 6.4e-07
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 ++lr++ GH ++v  + +s+++ +l ++s D+ +++W
  KHJ33565.1 320 KPLREYLGHnGDVLEVNWSKNNFLL-TSSLDKMIKLW 355
                 799******777****999998887.5777******* PP

  == domain 3  score: 15.0 bits;  conditional E-value: 9.6e-06
                 EEEEEEESSSS.EEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40   2 qclrtltGHss.vtslafspdgawl.asGsdDgtvriWd 38 
                 +cl+t+  ++  +ts+ f+p  + + +sGs D+ +r+W+
  KHJ33565.1 361 ECLTTF-CQKElITSITFHPTDDRFfLSGSLDCILRLWS 398
                 577777.455579****9999999626***********5 PP

  == domain 4  score: 9.8 bits;  conditional E-value: 0.00043
                 SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++t++af p+g+  ++Gs  g + ++d
  KHJ33565.1 412 DPITAVAFTPNGSIAIAGSSSGLCNLYD 439
                 56************999*8899998887 PP

  == domain 5  score: 1.4 bits;  conditional E-value: 0.2
                 EEEEE....EETTSSE.....EEEEETTSEEEEE CS
        WD40  13 vtsla....fspdgaw.....lasGsdDgtvriW 37 
                 +t+++     ++d++      l+s s D  +r++
  KHJ33565.1 467 ITGIKtlflPPDDQDTgdvsiLVS-SNDSRIRLY 499
                 666655544222222255554665.55*****98 PP

  == domain 6  score: 10.3 bits;  conditional E-value: 0.00029
                 EEEESS.SS...EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   5 rtltGH.ss...vtslafspdgawlasGsdDgtvriW 37 
                  ++ GH +    +   +fs dg+++++Gs++++ ++W
  KHJ33565.1 508 MKFQGHqNThsqI-KASFSCDGRYIICGSENRKTYMW 543
                 5688896444668.6679************9999999 PP

  == domain 7  score: -1.2 bits;  conditional E-value: 1.3
                 EEESSSS.EEEE CS
        WD40   6 tltGHss.vtsl 16 
                  +t+H+s vt  
  KHJ33565.1 560 MFTAHNSiVTTA 571
                 589**7746544 PP

  == domain 8  score: 1.1 bits;  conditional E-value: 0.23
                 EETTSSEEEEEETTSEEEE CS
        WD40  18 fspdgawlasGsdDgtvri 36 
                  ++dg+ +++++++g+++ 
  KHJ33565.1 637 SHDDGPIILTSDMNGSIKC 655
                 5899******999****96 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.045   1.6e+02      35      65 ..     254     284 ..     247     293 .. 0.87
   2 ?    3.5   0.0     0.024        85      37      89 ..     328     377 ..     316     380 .. 0.79
   3 !    6.7   0.0    0.0025       8.9      35      71 ..     408     444 ..     393     468 .. 0.83
   4 ?   -0.4   0.0       0.4   1.4e+03      53      81 ..     487     515 ..     481     547 .. 0.72

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.045
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrll 65 
                  +k+++ + +++++ dg+ La a  d  vr+ 
   KHJ33565.1 254 SKSGNAIWAMEFSLDGRYLATAGCDHIVRVW 284
                  57889999**************999999875 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.024
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  +++ v +++W++++ +L  +  d  ++l + + ++++ ++  k+   +t++++
   KHJ33565.1 328 HNGDVLEVNWSKNN-FLLTSSLDKMIKLWHPSRQECLTTFCQKEL--ITSITF 377
                  677899999*9886.5556667889**********9999954444..888887 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0025
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgk 71 
                  +++   ++++a+ p+g++   + s g ++l+d+ +++
   KHJ33565.1 408 CETPDPITAVAFTPNGSIAIAGSSSGLCNLYDIDQEN 444
                  477789**************************98765 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 0.4
  ANAPC4_WD40  53 Lavaysdgevrlldaesgkvvhslsvkse 81 
                  + v+ +d+++rl++ ++ ++  +++ +++
   KHJ33565.1 487 ILVSSNDSRIRLYKLKDSQLEMKFQGHQN 515
                  45677778888888877777777766655 PP

>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   2.5e-06    0.0089      14      70 ..     513     567 ..     497     586 .. 0.90
   2 ?   -2.5   0.0       1.2   4.3e+03      26      41 ..     634     651 ..     628     655 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 2.5e-06
  Exo_endo_phos_2  14 lenlestlekllselkspkiiilGDfNakhplWgsedtdssargeeLiefleehsls 70 
                       +n++s+++  +s  +  ++ii+G  N+k ++Wg +++ds+ ++  L+e++++h+  
       KHJ33565.1 513 HQNTHSQIKASFSCDG--RYIICGSENRKTYMWGAKSKDSDPKEPTLMEMFTAHNSI 567
                      4799999999999999..9****************99999*************9976 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.2
  Exo_endo_phos_2  26 selksp..kiiilGDfNa 41 
                      s++++   +ii++ D+N 
       KHJ33565.1 634 SRTSHDdgPIILTSDMNG 651
                      444444479*******95 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.1   0.00022      0.78     176     228 ..     245     298 ..     195     377 .. 0.77
   2 ?   -1.0   0.0      0.18   6.6e+02     187     221 ..     411     445 ..     400     462 .. 0.77
   3 ?   -0.1   0.0       0.1   3.7e+02     146     161 ..     487     502 ..     414     554 .. 0.49

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00022
    Ge1_WD40 176 eieegllkieehs.liveaafspdGtalatasedGevkffqvyledeeeprCLh 228
                 e++++ l +++    i    fs dG  lata  d +v+ + v  + ++++   h
  KHJ33565.1 245 ENDKSHLAVSKSGnAIWAMEFSLDGRYLATAGCDHIVRVWVVLSNPDDRRTFEH 298
                 44556677777754799999********************88766554444445 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.18
    Ge1_WD40 187 hsliveaafspdGtalatasedGevkffqvylede 221
                    i+  af+p+G    + s+ G+  ++ + +e+ 
  KHJ33565.1 411 PDPITAVAFTPNGSIAIAGSSSGLCNLYDIDQENG 445
                 3469999******988888999******9988876 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.1
    Ge1_WD40 146 llvltrgdkaeiwsvd 161
                 +lv ++ +++ +++++
  KHJ33565.1 487 ILVSSNDSRIRLYKLK 502
                 4444455555555443 PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.39   1.4e+03      10      46 ..     338     376 ..     332     415 .. 0.75
   2 ?    8.2   0.0   0.00068       2.4      10      39 ..     482     511 ..     477     525 .. 0.83
   3 ?    0.4   0.0      0.18   6.5e+02      64      98 ..     709     741 ..     707     746 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.39
    BBS2_Mid  10 dgeneLvvgsddfeirvfk..eeelvaeitetekvvsla 46 
                   +n L+ +s d  i++++  ++e ++++ ++e ++s++
  KHJ33565.1 338 SKNNFLLTSSLDKMIKLWHpsRQECLTTFCQKELITSIT 376
                 556778888889999888522567888888888887765 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00068
    BBS2_Mid  10 dgeneLvvgsddfeirvfkeeelvaeitet 39 
                  g+ +++v+s+d +ir++k ++   e++ +
  KHJ33565.1 482 TGDVSILVSSNDSRIRLYKLKDSQLEMKFQ 511
                 57789**************99999888755 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.18
    BBS2_Mid  64 vyekkerlWrvksknevvalaaydingdgtkeliv 98 
                 +y+++   Wr k +ne+++  + +++   t e+++
  KHJ33565.1 709 IYRQNVLNWRGKVSNEPMQNSQREESI--TPEIVI 741
                 8**************998766655553..555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (912 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       558  (0.0311228); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 6342.70
//
Query:       KHJ33566.1  [L=261]
Description: putative 60s ribosomal protein l8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.9e-21   73.4   0.4    1.6e-20   72.6   0.4    1.5  1  Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 famil


Domain annotation for each model (and alignments):
>> Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.6   0.4     9e-25   1.6e-20       8      90 ..     126     209 ..     119     214 .. 0.87

  Alignments for each domain:
  == domain 1  score: 72.6 bits;  conditional E-value: 9e-25
                     HHHHHHTEEEESHHHHHHHHHTTTESEEEEETTSSSGGHHHHHHHHHHHTTEEEEEESCHHHHHHHTTSSSE.CSEEEEEESTT CS
  Ribosomal_L7Ae   8 kkakkagklvlGlkevtkalergeaklvilAedvepeekkkllealckekevpyvkvkskkeLGelvgkkrp.vsalaikdegd 90 
                      ++kk+ ++++Gl++v+ ++e+++a lv++ +dv+p+e + +l+alc++++vpy ++k+k++LG++v+kk++ v a++ +  +d
      KHJ33566.1 126 DVSKKPYTVKYGLNHVVGLVENKKASLVLIPNDVDPIELVIFLPALCRKMGVPYAIIKGKARLGTVVHKKTAaVLAITEVRSED 209
                     568999****************************************************************75444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       934  (0.0520944); expected 358.6 (0.02)
Passed bias filter:                      593  (0.0330749); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2032.05
//
Query:       KHJ33567.1  [L=326]
Description: putative glycosyltransferase family 4 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.7e-26   90.9   0.0      9e-26   90.4   0.0    1.2  1  Glycos_transf_1  Glycosyl transferases group 1
    3.1e-24   85.9   0.2    4.8e-24   85.3   0.2    1.3  1  Glyco_trans_1_4  Glycosyl transferases group 1
    5.9e-05   23.4   0.0    0.00013   22.3   0.0    1.6  1  Glyco_trans_1_2  Glycosyl transferases group 1


Domain annotation for each model (and alignments):
>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.4   0.0   1.5e-29     9e-26      17     155 ..      64     203 ..      55     220 .. 0.87

  Alignments for each domain:
  == domain 1  score: 90.4 bits;  conditional E-value: 1.5e-29
                      EEEEESS-TTTTTHHHHHHHHHCCCCCHCSCEEEEEES.STTHHHHHHHHHHHCTTCGGGEEECCHSSSHHHHHHCESEEEEEESSBSS-HHHH CS
  Glycos_transf_1  17 iilsvgrlekeKgvdllikafallkkqlnpnvklviaGngeeekelkklaeelelsdnviflgevsredleellknadifvlpsisEgfGivll 110
                      +i++++rl ++Kg dll+ a++++ +  +p+v+++iaG+g++   l+++ e   l+d+v++lg + +e++  ++ + +i+++ps sE+fG+v++
       KHJ33567.1  64 TIVVISRLFYNKGTDLLVAAIPRILAS-HPKVRFIIAGSGPKAIDLEQMLERNVLQDRVEILGPIRHEEVRDVMVRGHIYLHPSLSEAFGTVIV 156
                      7999********************987.****************************************************************** PP

                      HHHHTT--EEEETTTTHCHHCHTTTSEEEE-TT..-HHHHHHHHHHH CS
  Glycos_transf_1 111 EAmaaglpviasnaggpaevvkdgetGllvkpn..naealaeairkl 155
                      EA ++gl v+++++gg++ev+  + t + ++++   ++a  +ai+ l
       KHJ33567.1 157 EAASCGLYVVCTQVGGIPEVLPAHMTVFAKPEEddLVAATGKAIAAL 203
                      ***********************998666666643334444444444 PP

>> Glyco_trans_1_4  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.3   0.2   7.9e-28   4.8e-24       3     130 ..      64     198 ..      62     206 .. 0.83

  Alignments for each domain:
  == domain 1  score: 85.3 bits;  conditional E-value: 7.9e-28
                      EEEEES---GG.GTHHHHHHHHHHHH.HH..EEEEEES---..HHHHHHHT..T-T.TEEEE---..THHHHHHHH-SEEEE--..---SHHHH CS
  Glyco_trans_1_4   3 vilfvGrleenvkgvdllleavpllrkkd..vrlvivGdgprpeeleelaa..gleerveftGfv..edlaellaaadvfvaPs..egfglkll 88 
                      +i+ ++rl  n kg dll+ a+p++++++  vr++i+G+gp++ +le++++   l++rve++G +  e++++++ + ++++ Ps  e fg +++
       KHJ33567.1  64 TIVVISRLFYN-KGTDLLVAAIPRILASHpkVRFIIAGSGPKAIDLEQMLErnVLQDRVEILGPIrhEEVRDVMVRGHIYLHPSlsEAFGTVIV 156
                      6999****557.**************88447*********96668998876666899********9899****************99******* PP

                      HHHHTT-EEEE-TGGGTTT--.TTSSEE--TT-HHHHHHHHHH CS
  Glyco_trans_1_4  89 EamaaglpvVatdvggiaevv.gengllvppgdpealaeailr 130
                      Ea+++gl vV+t+vggi+ev+     + ++  ++++l++a  +
       KHJ33567.1 157 EAASCGLYVVCTQVGGIPEVLpAHMTVFAK-PEEDDLVAATGK 198
                      *******************99743334443.356666665443 PP

>> Glyco_trans_1_2  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   2.1e-08   0.00013       1      89 [.     141     229 ..     141     232 .. 0.89

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 2.1e-08
  Glyco_trans_1_2   1 ivLnpsrsespnlrlfEaaacGafaltddaegleelftpgkevilfedleelaekiryllanpeerraiaeaarervlaehtydhraeq 89 
                      i+L+ps se + ++++Eaa cG  +++++  g++e +    +v+   ++++l+++ ++++a     + + e+ + +v++ ++++  a++
       KHJ33567.1 141 IYLHPSLSEAFGTVIVEAASCGLYVVCTQVGGIPEVLPAHMTVFAKPEEDDLVAATGKAIAALRANKVRTENFHDQVKKMYSWTDVAKR 229
                      79***********************************8775555555************998888888889999999999999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       519  (0.0289475); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 2248.40
//
Query:       KHJ33568.1  [L=598]
Description: putative phytoene synthase lycopene cyclase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-56  192.2   0.0    1.4e-56  191.9   0.0    1.1  1  SQS_PSY   Squalene/phytoene synthase


Domain annotation for each model (and alignments):
>> SQS_PSY  Squalene/phytoene synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.9   0.0   8.1e-61   1.4e-56       1     262 [.     294     586 ..     294     587 .. 0.88

  Alignments for each domain:
  == domain 1  score: 191.9 bits;  conditional E-value: 8.1e-61
                 XXHH-HHHHHHHTTS-HHHHHHHHHHHHHHHHHT-.-----........------------..................---------THHHHHHHHHH CS
     SQS_PSY   1 lraasksfylaslllppelRdalgalYafcreaddlvDdvseplqararldwwrdavdavya............e....dklkpprepvlralaqlirt 83 
                 l+++s+sfylas  +  ++R +l++lY+f r+addlvD+++++ +a ++ +++ + ++ +y+            e      ++++++    +  ql++t
  KHJ33568.1 294 LKKKSRSFYLASATFSGRMRIDLILLYSFYRVADDLVDNAETEIEAFQWINKLTRFLELAYSrhekkqekpkqlEktqfF-IQENFPQSTHLALQLLPT 391
                 6899************************************9999999999999999999998766665554444144431.3456666669999***** PP

                 HT--HHHHHHHHHHTS--SS-.............--SHHHHHHHHHHHHHHHHHHHHHHH-S.S-H........HHHHHHHHHHHHHHHHHHHHT---S CS
     SQS_PSY  84 yklpkellleliegmeadlef...........tryetlddLeeYcyrvagvVgelclrllgarrsd........ralaeaarrlGkalQltnilRdvpe 163
                 ++l++e++++l+eg+++dlef            ++++  dLe Y+ rvag+V e cl+l  +++++        r l +a++r+G+alQ++ni+Rd++ 
  KHJ33568.1 392 QYLSPEPFYDLLEGFKMDLEFlksrnenstrnFPIVDEHDLEIYALRVAGTVAESCLELAFHHSKSntpllqqiR-LKNAGKRMGVALQYVNICRDIVT 489
                 ********************9888888887667799**************************9555555665534.89999****************** PP

                 HHHHTT..S-HHHHHHHT--HHHHHHT-.-SHHHHHHHHHHHHHHHHHHHHHHHTGGGS.-HHHHHHHHHHHHHHHHHHHHHHHTTT-TTT------HH CS
     SQS_PSY 164 DaergrvyLPadvlkefgvseedllrkgvrsaelrallrrlaerArelldearellkqlpdrrarpalllavalyrailerieaadydvlsrrvklsll 262
                 Da++grvyLPa +lk +g++ +++l+++   +++++l  rl+e A + + +a   +  l + ++r ++++av+ y++i + +++ +y + ++r+ ++ +
  KHJ33568.1 490 DAKIGRVYLPALWLKDEGITYDQILSQP-SGPAIEKLRSRLLELAFKNYFNALSEMSEL-PSEVRSPMKVAVESYMEIARVLREGEYRLEDGRAIIPIW 586
                 ************************9888.7778**************************.777************************988899877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (598 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       723  (0.0403257); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4218.69
//
Query:       KHJ33569.1  [L=646]
Description: putative retinal pigment epithelial membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.7e-117  391.7   0.0   6.5e-117  391.5   0.0    1.0  1  RPE65     Retinal pigment epithelial membrane protein


Domain annotation for each model (and alignments):
>> RPE65  Retinal pigment epithelial membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  391.5   0.0  3.6e-121  6.5e-117       2     462 ..      19     603 ..      18     604 .. 0.82

  Alignments for each domain:
  == domain 1  score: 391.5 bits;  conditional E-value: 3.6e-121
                 S---S-EEEC--E..EEE---TT-.-EEEEEEEEE.ESCET.TCCSSSGGGSEEEEEEEEE...CTTEE..EEEEEE---HHHHHHHHHTS--SBSTT. CS
       RPE65   2 apvreevpeplevkvieGeiPawl.kGtllRnGpgkpevge.dgkvshwFDGdGmlhrfef...kdgkv..tyrnRfvrtdaylaerkagkslfdglp. 92 
                 ap++e+   + ++++ +G+iP++l  G+++RnG + p v++  g+ +hwFDGdGml+++ f   +dg+v  ++++R++ td+yl +     ++++++p 
  KHJ33569.1  19 APIHESPCLT-RCDF-TGNIPPELaGGQYVRNGGN-PLVNSdLGREAHWFDGDGMLSGVVFhraEDGSVvpEFVSRYILTDSYLMSVTLPSLRHPIIPs 114
                 5665444444.9999.7*******99*********.98888899*****************66544666689**************9988855544444 PP

                 ...................................TTSB-----SEEEEETTEEEEEETTCEEEEEETTTTEEEEE--CCC.................. CS
       RPE65  93 ...................................akkkknnantnvvyhggrllalteagkpyeidpetLetlgkvdldg.................. 138
                                                     +k++++antn++yh+gr+la++e+g+p ++ ++ Let+g++d  +                  
  KHJ33569.1 115 matlvnpastllhilgsvfrtllfvlfshlsgslqPMKRISVANTNILYHDGRALATCESGPPLRVLLPRLETVGWFDGYKvegepatetkvgepfgvs 213
                 445555555555555566666667777788888889*****************************************5533456888877766555555 PP

                 ..TTS-B.......-SS-EEETTCEEEEEEEECCTCECEEEEEEE-.T...T.-.EEEEEE.EECS.S...------EEE-SSEEEEEE--EECHC.HC CS
       RPE65 139 ..eseaf.......tAHpkvdpetgelynfglslgkppsvtysvfdvaaaid.k.srevki.klpgekl.kpayiHdfalTenyvvlvelplklnlkkg 224
                   +   f       tAHp+ dp t+el++f+ ++   p+v ys++ ++ +i+ +  +++++ + p +++ +++++Hd++l+++ +v+++lpl+l++++ 
  KHJ33569.1 214 vgN---FnilteriTAHPREDPITKELILFHSTFF-APFVYYSII-PSMHIKtNnIKPRSLiNTPIPGIkSAKMMHDMGLSRRSCVIMDLPLSLDPLNI 307
                 550...05556666*****************9997.554566666.4656553344455555888776779************************9987 PP

                 CCTCGGCEEE-TTS-EEEEEEETTT.T--GG...EEEEE--SEEEEEEEEEEET...........TCE.EEEEEEEE.SS....--STTS-CT.T---- CS
       RPE65 225 kksggdalewdpekptrfgvipRrg.ekegvakfrwfeteaffvfHtaNayeee..........edge.vvvdlcryeda..e.vldnlylenlrsrkg 308
                   +++++++++p++p+rfgv+pR + e +     rwfet+++++fHtaN++++           ++   v++ +cr+++a  +  ++n+  ++l+ +k 
  KHJ33569.1 308 V-QNKPIISYNPSEPSRFGVFPRWEpEAV-----RWFETSPCCIFHTANTWDDLslvsetlelsNNVTaVNMLVCRLTSAslVyNAGNIATPALETKKA 400
                 6.589*******************73433.....8****************988**********55555**********94433444444444432222 PP

                 .-...GG.TGGG-EEEEEEEEETTTTTCEECE.EEEEESS-EEEEE--GGGTTS--SEEEEEE-SSTTSS.....-..--EEEEEET............ CS
       RPE65 309 eakkeek.aeesqsrlrryrldlktgsateekeeaalsdrslEfPrinpaysgrkyryvYgasasggsdk.....askfdglvkvDl............ 389
                  +    +  ee+q+rl++yr+ l++ +++  ++++als++++EfP+i ++ s+ ++ry+Yg++ s+++++     a+k+d+l+k+D             
  KHJ33569.1 401 -S---VYpVEEEQCRLYYYRFLLSE-TQNIITHQFALSAIPFEFPTIPQNLSMSQARYIYGCTLSNSTFGtalggAAKIDCLAKIDSvmlldsarvspp 494
                 .2...22424789**********65.5555557*******************************99998899999778899999999************ PP

                 ....................-TTTE..............EE--EEEEESTTTSSTT-EEEEEEEEET...........TTEEEEEEEETTBCCC.SEEE CS
       RPE65 390 ....................etkgrea.........eghypgEpiFVPragateEDdGvllsvvlde...........eersellvldAktlte.vArv 447
                                     +     +         +g++++Ep FVPr+++++EDdG+lls+v+de           +++sel+++dA t+++  ++v
  KHJ33569.1 495 tpiigcvdnrsvaeiiksnnK-----NdsikifklpPGCFAQEPRFVPRNEGKSEDDGWLLSYVFDEsqinpdgfarpDAKSELWIIDAITMEKiGCKV 588
                 ******999999998865331.....1456788888888**************************999999999********************99*** PP

                 EESS---S--BEEEE CS
       RPE65 448 elpqrvpygfHGtfv 462
                 +lpqrvpyg+HG+++
  KHJ33569.1 589 KLPQRVPYGLHGSWF 603
                 **************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (646 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       327  (0.0182386); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 4407.00
//
Query:       KHJ33570.1  [L=568]
Description: putative phytoene dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      8e-24   84.7   0.0    4.5e-22   79.0   0.0    2.1  2  Amino_oxidase  Flavin containing amine oxidoreductase
    5.6e-14   52.1   0.1    1.5e-13   50.8   0.1    1.7  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain
    6.5e-10   39.1   0.0    2.7e-05   23.9   0.0    2.3  2  DAO            FAD dependent oxidoreductase
    2.8e-08   33.3   0.0    1.3e-05   24.7   0.0    2.4  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
    1.2e-06   28.0   2.8    0.00016   20.9   3.3    2.2  2  FAD_binding_2  FAD binding domain
    2.5e-06   26.5   0.2       0.01   14.6   1.2    2.2  2  HI0933_like    HI0933-like protein
    0.00043   20.8   1.7        0.2   12.2   1.1    2.6  2  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase
    0.00055   19.4   1.4     0.0009   18.7   1.4    1.3  1  FAD_oxidored   FAD dependent oxidoreductase
      0.009   15.3   1.2      0.022   14.0   1.2    1.6  1  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.024   13.8   2.2      0.027   13.6   1.4    1.5  2  GIDA           Glucose inhibited division protein A
       0.03   13.6   0.4      0.052   12.8   0.4    1.3  1  FAD_binding_3  FAD binding domain
      0.033   13.0   0.0       0.27   10.0   0.0    2.2  3  MCRA           MCRA family
      0.048   12.9   0.4      0.075   12.3   0.4    1.3  1  Thi4           Thi4 family


Domain annotation for each model (and alignments):
>> Amino_oxidase  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.0   0.0   3.3e-25   4.5e-22       2     262 ..      18     288 ..      17     389 .. 0.80
   2 ?    3.9   0.0     0.019        26     411     439 ..     470     496 ..     454     509 .. 0.76

  Alignments for each domain:
  == domain 1  score: 79.0 bits;  conditional E-value: 3.3e-25
                    HHHHHHHHHHHTTEEEEEEESSSSSBTTS-EEEETTEEEESS--EEETTTHHHHHHHHH....TTCCCCEEEESCCGCEEEEETTEECC..TTEEC CS
  Amino_oxidase   2 aGLaaArqLlsaGfdVtvlEardrvGGRirtvrsdGylielGamwftgagnpllellke....lgledslslpdpgapkrvlskggref..pgdls 91 
                     G+a A +L+ aG+ VtvlE +d +GGR++ ++ dG+ +++G++ +    + + e +++    l  ed++ +++ ++ + +++ +g++f    d  
     KHJ33570.1  18 GGIASAARLAKAGYAVTVLEKNDFTGGRCSLIHNDGFRFDQGPSLLLL-PQLFHETFNDldtsLAAEDVTLFKC-EPNYHIWFGDGKNFklSSDMA 111
                    6********************************************999.4444444555111255555555666.569999999999999966666 PP

                    HHHHHHHHHHH....HHHHH...CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHTSTT CS
  Amino_oxidase  92 pvpaewealle....qgals...aellsleeklrlgleallqktldeldldskslaesleelgrrepgdvevwdrliepelfaklefasglfagdp 180
                     + +e+ea+      +++ls    + +++e ++r+ l  ++   +  ++   +++   l +l+ +e+    + ++++++ l++ + f s +++   
     KHJ33570.1 112 VMKQEIEAFEGkdgfERYLSwlqEAHRHYEISVREVLHKNF---SSIFNMLRPNFFVNLFDLHPFESIYSRASRYFLTDRLRRVFTFGSMYMG--- 201
                    66666666666322211111335555555556666665555...555666666666666666666666655588899999999999******9... PP

                    TTCBHHHHTCCCCHHHHHTSCCCEETTHTHHHHHHHHH..TTTTEEEETSEEEEEEEEETTC...EEEEETTSTEEEESEEEE-S-H CS
  Amino_oxidase 181 selsaklalpllwelegfggslllprgGlsqlpealae..elrgldirlntrVkeikregdg...vtvtledgevveaDaVvvTvpl 262
                    ++  a    ++l+++++ ++++++p+gG+++++ al++  +++g++irl+++V++i + gdg    +v+l++ge +  D Vvv ++l
     KHJ33570.1 202 MSPMAAPGTYSLLQYTELAEGIWYPKGGFHAIVGALERicTRLGVEIRLSSPVSQILTTGDGkavTGVELSSGERLYSDLVVVNADL 288
                    66699*****************************************************6666577999999************9987 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.019
                    HHHHCHHCSTTEEE.SGGGCTTTTTS.HHH CS
  Amino_oxidase 411 dplakpegdprlffAGehtsreypgt.veg 439
                    +p  k  ++++++f G++t+   pgt v+ 
     KHJ33570.1 470 RPKTKHPQIKGVYFVGASTH---PGTgVPI 496
                    444444499***********...9998875 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.8   0.1   1.1e-16   1.5e-13       1      55 [.      12      66 ..      12      77 .. 0.91

  Alignments for each domain:
  == domain 1  score: 50.8 bits;  conditional E-value: 1.1e-16
                   EE--SHHHHHHHHHHHCCTEEEEEE-SSSSSSGGG-EECETTCEECTS---EEET CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagfdvlllekrdrlGGraasyevpgvrvdygahifhgs 55
                   +vGaG++G + A++Lakag+ v++lek+d +GGr++ ++++g+r+d g++ +  +
     KHJ33570.1 12 VVGAGVGGIASAARLAKAGYAVTVLEKNDFTGGRCSLIHNDGFRFDQGPSLLLLP 66
                   8************************************************998764 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   1.9e-08   2.7e-05       3      34 ..      11      44 ..       9     141 .. 0.84
   2 !   13.0   0.0   4.2e-05     0.058     130     199 ..     218     286 ..     198     303 .. 0.80

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 1.9e-08
                EEECTSHHHHHHHHHHHHTT..EEEEESSSSTTS CS
         DAO  3 viiGGGiiGlstAyeLarrg..Vtllekgdiags 34
                +++G+G+ G++ A  La++g  Vt+lek+d+ g 
  KHJ33570.1 11 IVVGAGVGGIASAARLAKAGyaVTVLEKNDFTGG 44
                8****************************77763 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 4.2e-05
                 TTSEEEEETTEEEEEHHHHHHHHHHHHHHTT-EEEESECEEEEEEEE..TCEEEEEEECT.EEE.EEEEE.EEE- CS
         DAO 130 gllgalfypdtgqvdpakltaalaraaealGveilegtevtgleeed..gkvwgverttp.gen.daada.vVna 199
                 +l+ +++yp +g    ++ + al r + +lGvei++ ++v  +  ++  + v+gv  + + ge+  + d  vVna
  KHJ33570.1 218 ELAEGIWYPKGGF---HAIVGALERICTRLGVEIRLSSPVSQILTTGdgKAVTGV--ELSsGERlYS-DLvVVNA 286
                 567899****999...999***********************9553345888888..3333887566.8856665 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   9.1e-09   1.3e-05       3      42 ..      10      48 ..       8     116 .. 0.89
   2 !    6.2   0.0    0.0038       5.2     188     233 ..     236     284 ..     230     286 .. 0.88

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 9.1e-09
                 EEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  3 vvviGgGpAGlaaaltlaqagakvtlvelegtclnggcll 42
                  +v+G+G++G+a a +la+ag+ vt++ +++ + +g+c+l
   KHJ33570.1 10 AIVVGAGVGGIASAARLAKAGYAVTVL-EKNDFTGGRCSL 48
                 58*************************.9999******98 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0038
                  HHHHHHHHTTEEEEESCEEEEEEETTE..EEE.EEETTSCEEEESEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxx..xxx.xxxxxxxxxxxxxxxx RF
  Pyr_redox_2 188 aleealekeGvevklgtsvkeidgnge..kle.vvledgeeidadlvvv 233
                  ale+  ++ Gve++l + v +i   g+   ++ v+l++ge++  dlvvv
   KHJ33570.1 236 ALERICTRLGVEIRLSSPVSQILTTGDgkAVTgVELSSGERLYSDLVVV 284
                  578888999*************98888877779***************8 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   3.3   1.2e-07   0.00016       2      36 ..      10      44 ..       9      49 .. 0.93
   2 ?    4.4   0.0     0.012        17     138     183 ..     228     273 ..     194     295 .. 0.87

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 1.2e-07
                   EEEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGS CS
  FAD_binding_2  2 viViGsGlAGLaAAleaaeaGlkvavvekeqefgg 36
                   +iV+G+G++G a+A+++a+aG  v+v+ek + +gg
     KHJ33570.1 10 AIVVGAGVGGIASAARLAKAGYAVTVLEKNDFTGG 44
                   69****************************99988 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.012
                    .HHHHHHHHHHHHHHTCTEEEEESEEEEEEEECTT..EEEEEEEEETT CS
  FAD_binding_2 138 vtghallarlvesarkagvdfqerteadeLivedg..rvtGavvenpe 183
                    +  ha++ +l + + ++gv+++ + ++ +++++++   vtG++++  +
     KHJ33570.1 228 GGFHAIVGALERICTRLGVEIRLSSPVSQILTTGDgkAVTGVELS--S 273
                    56799**************************974458*****998..3 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   1.2   7.5e-06      0.01       2      36 ..       9      43 ..       8      49 .. 0.91
   2 !    8.6   0.0   0.00047      0.65      93     160 ..     216     284 ..     212     286 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 7.5e-06
                 SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS- CS
  HI0933_like  2 dviviGgGaAGlmaAisaakrgkrVlllekakklg 36
                 + iv+G+G  G+  A+++ak+g  V++lek++ +g
   KHJ33570.1  9 TAIVVGAGVGGIASAARLAKAGYAVTVLEKNDFTG 43
                 579***************************98665 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00047
                  EEE-STTEEEETT.-CHHHHHHHHHHHHHHT-EEE-S--EEEEECETTE...EEEEE.TTEEEEESEEEE CS
  HI0933_like  93 lkeedsgrlFpvsdkaedivdallkelkeagvklrletevksvekeedgk..frvktkseeeleadklvl 160
                  ++e ++g  +p+    + iv al++ +++ gv++rl++ v+++ ++ dgk    v+++s+e+l +d +v+
   KHJ33570.1 216 YTELAEGIWYPKG-GFHAIVGALERICTRLGVEIRLSSPVSQILTTGDGKavTGVELSSGERLYSDLVVV 284
                  5666667777777.7789*************************877766511567778889999888887 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   1.1   0.00014       0.2       2      32 ..      10      40 ..       9      45 .. 0.93
   2 ?    6.2   0.0     0.011        15      45      79 ..     236     272 ..     231     275 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00014
                EEEECSSHHHHHHHHHHHHTTSEEEEEESSS CS
   Pyr_redox  2 vvvvGgGyiglElAgalaelgkkVtvversd 32
                ++vvG+G+ g+  A+ la+ g  Vtv+e +d
  KHJ33570.1 10 AIVVGAGVGGIASAARLAKAGYAVTVLEKND 40
                68**************************987 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.011
                 HHHHHHHHTTEEEECSEEEEEEEEETTS..EEEEEEE CS
   Pyr_redox  45 ilqeklekngievllntkveeiegsedg..vesvklk 79 
                 +l++  +++g+e++l++ v +i +++dg  v++v+l+
  KHJ33570.1 236 ALERICTRLGVEIRLSSPVSQILTTGDGkaVTGVELS 272
                 567777899*************977775579999986 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   1.4   6.5e-07    0.0009       3      38 ..      11      46 ..      10      55 .. 0.95

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 6.5e-07
  FAD_oxidored  3 vVvGGgpaGvaAAiaAaraGakvlLveergvlGGll 38
                  +VvG+g++G+a A   a+aG  v ++e++++ GG  
    KHJ33570.1 11 IVVGAGVGGIASAARLAKAGYAVTVLEKNDFTGGRC 46
                  7*********************************76 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   1.2   1.6e-05     0.022       1      31 [.      11      40 ..      11      44 .. 0.93

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.6e-05
  Pyr_redox_3  1 iIiGaGPaGlaaaielkkagledylilEkgn 31
                 i++GaG  G+a+a  l kag   +++lEk+ 
   KHJ33570.1 11 IVVGAGVGGIASAARLAKAGY-AVTVLEKND 40
                 89*******************.8******86 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   1.4     2e-05     0.027       2      31 ..      10      39 ..       9      52 .. 0.85
   2 ?   -3.7   0.0       3.4   4.7e+03     119     146 ..     255     284 ..     250     285 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2e-05
                EEEE-SSHHHHHHHHHHHHTT--EEEEES- CS
        GIDA  2 viViGgGhAGceAAlaaarlGakvlLithk 31
                 iV+G+G  G++ A+ +a++G+ v+ + ++
  KHJ33570.1 10 AIVVGAGVGGIASAARLAKAGYAVTVLEKN 39
                59**********************998544 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 3.4
                 EEEEECT..TEEEEEEETTS-EEEECEEEE CS
        GIDA 119 eelivee..kkvkgvvtedgetikakavvi 146
                 ++++++   k v+gv +++ge + ++ vv+
  KHJ33570.1 255 SQILTTGdgKAVTGVELSSGERLYSDLVVV 284
                 555444455789999999999999998886 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.4   3.8e-05     0.052       4      34 ..      10      40 ..       7      50 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.8e-05
                   EEEE--SHHHHHHHHHHHHTTHHEEEEESSS CS
  FAD_binding_3  4 VlIVGaGpaGlmlallLseaGvrvvlvekrs 34
                    ++VGaG  G+ +a  L++aG  v+++ek +
     KHJ33570.1 10 AIVVGAGVGGIASAARLAKAGYAVTVLEKND 40
                   689*************************975 PP

>> MCRA  MCRA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0    0.0002      0.27       2      56 ..       8      56 ..       7      87 .. 0.82
   2 ?   -0.2   0.0      0.24   3.2e+02     206     269 ..     231     291 ..     226     333 .. 0.79
   3 ?   -3.0   0.0       1.6   2.3e+03      67      93 ..     318     344 ..     293     351 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0002
                -EEEEE--SHHHHHHHHHHHHTT---GGGEEEE-SS-----------------CC CS
        MCRA  2 kkaylvGsGiasLaaAvyLirdakvpgenihileelkvaggsldgagdpekGyvl 56
                k+a +vG+G++++a+A+ L +     g  +++le+++ +gg +  ++++  G+ +
  KHJ33570.1  8 KTAIVVGAGVGGIASAARLAKA----GYAVTVLEKNDFTGGRCSLIHND--GFRF 56
                7899*************99775....689*************9987764..4544 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.24
                 HHCCHHHHHHHHHTT-EEE-SEEEEEEEEEEE.TTEEEEEEEEEEE.TTEEEEEE--TTEEEEE CS
        MCRA 206 eslilPlvkyLkeqgVdfqfntkVtdiefeeeeedkktvteielekeegeeetieleedDlvfv 269
                  +++  l++  ++ gV+++++  V++i ++   +d k vt++el++ e   + + + + Dlv +
  KHJ33570.1 231 HAIVGALERICTRLGVEIRLSSPVSQILTT---GDGKAVTGVELSSGERLYSDLVVVNADLVYA 291
                 66777778888899**************99...45789******98777777788888888875 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 1.6
                 HHHHHHHTTSB-SSSTTSBHHHHHHHH CS
        MCRA  67 eclwdLlssipSleepgasvldeieel 93 
                 + +w L ++ip l++++  ++de++e 
  KHJ33570.1 318 SFYWSLSRQIPELQTHNIFLADEYHES 344
                 56899999*****99999999999874 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   5.4e-05     0.075      17      55 ..       7      44 ..       1      53 [. 0.87

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 5.4e-05
                EEEEEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--T CS
        Thi4 17 esDvvivGaGssGLtaayylakkpdlkvailersvspGG 55
                +   ++vGaG  G+++a  lak+ +  v++le++   GG
  KHJ33570.1  7 KKTAIVVGAGVGGIASAARLAKA-GYAVTVLEKNDFTGG 44
                55679******************.********9877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       451  (0.0251548); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 4088.14
//
Query:       KHJ33571.1  [L=387]
Description: putative activator 1 41 kda subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.4e-19   68.1   0.1    1.3e-18   67.1   0.1    1.6  1  Rep_fac_C        Replication factor C C-terminal domain
    1.5e-16   61.0   0.4      9e-16   58.5   0.0    2.4  3  AAA              ATPase family associated with various cellul
    1.2e-13   51.2   0.1    1.4e-11   44.5   0.0    2.8  2  DNA_pol3_delta2  DNA polymerase III, delta subunit
      4e-10   39.9   0.0    1.1e-09   38.4   0.0    1.9  2  Rad17            Rad17 P-loop domain
    1.8e-06   28.5   0.3    0.00024   21.5   0.0    3.0  3  AAA_16           AAA ATPase domain
    4.8e-06   26.4   0.0    2.1e-05   24.3   0.0    2.0  2  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    2.4e-05   24.6   0.1    0.00061   20.1   0.0    2.7  2  AAA_22           AAA domain
    0.00015   21.7   0.0    0.00034   20.5   0.0    1.7  1  AAA_11           AAA domain
    0.00016   22.0   0.2    0.00047   20.4   0.2    1.8  1  AAA_assoc_2      AAA C-terminal domain
    0.00053   19.3   0.0    0.00089   18.6   0.0    1.3  1  DUF2075          Uncharacterized conserved protein (DUF2075)
     0.0012   18.8   0.0     0.0036   17.3   0.0    1.7  2  AAA_14           AAA domain
     0.0014   18.1   0.0      0.062   12.7   0.0    2.3  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
     0.0014   18.4   0.0      0.003   17.3   0.0    1.5  1  AAA_24           AAA domain
     0.0023   17.9   0.0      0.012   15.6   0.0    2.1  1  AAA_5            AAA domain (dynein-related subfamily)
     0.0038   16.4   0.0     0.0059   15.8   0.0    1.3  1  DUF815           Protein of unknown function (DUF815)
     0.0055   17.0   0.0       0.01   16.1   0.0    1.5  1  AAA_28           AAA domain
     0.0066   16.5   0.0       0.15   12.1   0.0    2.6  3  ResIII           Type III restriction enzyme, res subunit
     0.0069   15.9   0.0      0.014   14.9   0.0    1.5  1  AAA_7            P-loop containing dynein motor region
     0.0098   15.6   0.0      0.061   13.0   0.0    2.2  2  AAA_30           AAA domain
  ------ inclusion threshold ------
      0.012   16.0   0.2       0.33   11.3   0.0    2.7  3  AAA_19           AAA domain
       0.02   15.3   0.0       0.32   11.4   0.0    2.5  2  RNA_helicase     RNA helicase
      0.021   14.7   0.0       0.11   12.4   0.0    2.1  1  AAA_3            ATPase family associated with various cellul
      0.022   15.3   0.0       0.08   13.5   0.0    2.0  2  AAA_18           AAA domain
      0.085   12.3   0.0        3.6    7.0   0.0    2.5  2  PhoH             PhoH-like protein
       0.14   12.0   0.0       0.37   10.6   0.0    1.6  1  DUF4863          Domain of unknown function (DUF4863)


Domain annotation for each model (and alignments):
>> Rep_fac_C  Replication factor C C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.1   0.1   1.9e-21   1.3e-18       1      88 []     290     380 ..     290     380 .. 0.94

  Alignments for each domain:
  == domain 1  score: 67.1 bits;  conditional E-value: 1.9e-21
                 --HHHHHHHHHHHHH....T-HHHHHHHHHHHHHHC---HHHHHHHHHHHGCCS..S-HHHHHHHHHHHHHHHHHHHCTH-HHHHHHHHHHH CS
   Rep_fac_C   1 phpteieeileacln....gdfeeaykklrellvekGysaediltqlhrvvkeqeelpeaqkleilellgeiekrlveGasehlqlsallar 88 
                 +++++i+++l+a+++    + +++++++++ +lv++G+s+++i++ql++v+  +e + +  k++i   ++ei+krlv+G++ehl +++l +r
  KHJ33571.1 290 IPEETIQRLLQAMQPksnrAIYADVSNVVA-NLVADGWSGSQIISQLFEVILHNEYIADIHKNKITIIFSEIDKRLVDGSDEHLTILDLALR 380
                 5899*********889899999999999*7.*********************997799********99********************9875 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   0.0   1.3e-18     9e-16       1     127 [.      69     195 ..      69     200 .. 0.83
   2 ?   -1.7   0.0         5   3.6e+03      87     126 ..     226     269 ..     211     274 .. 0.66
   3 ?   -2.1   0.1       6.9   4.9e+03      48      69 ..     343     362 ..     326     372 .. 0.66

  Alignments for each domain:
  == domain 1  score: 58.5 bits;  conditional E-value: 1.3e-18
                 EEEESSTTSSHHHHHHHHHHHH......THEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS..........TS.EEEEEETGGGHHHHHTTCCCHHH CS
         AAA   1 vllyGppGtGKTllakavakel......gvefleisgsellskyvgesekkirelfkeakeka..........kp.silfiDEidalaksrsgseseee 82 
                 +l+yGppGtGKT+++ a+akel       +++le+++s+ +   ++   +ki+++ +   ++a           p +i+++DE+d+++++         
  KHJ33571.1  69 MLFYGPPGTGKTSTVLALAKELfgpelyRTRVLELNASDER--GISIVRSKIKDFARMQLSQAppqyrnrypcPPfKIIILDEADSMTQDA-------- 157
                 89*******************866555569999***99999..666666666666665444445667888998778***********9888........ PP

                 HHHHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHHHSTTSSEE CS
         AAA  83 ervvnqLlteldgvkkkeskvivigatnrpdkldpallrgRfdrk 127
                    +++L + +++++k    + +++++n++ ++ ++l  +R+++ 
  KHJ33571.1 158 ---QSALRRTMENYSK---ITRFCLICNYVTRIIDPLA-SRCSKF 195
                 ...*************...478*********9999999.888765 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 5
                 HHHHHHHHHTTTS.....SSTEEEEEEESSGGGSTHHHHSTTSSE CS
         AAA  87 nqLlteldgvkkk.....eskvivigatnrpdkldpallrgRfdr 126
                 ++L++  +g  +k     +s   +i a++  + ++ a   +R+++
  KHJ33571.1 226 EKLVNCAEGDLRKaitflQSAARLIEAATPLNLIEAADN-DRMEI 269
                 445555554444445555555778888888888888888.88876 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 6.9
                 HHHHHHHHTSTSEEEEEETGGG CS
         AAA  48 elfkeakekakpsilfiDEida 69 
                 e+++++ +++    +++ Eid+
  KHJ33571.1 343 EYIADIHKNK--ITIIFSEIDK 362
                 4444554444..6677788876 PP

>> DNA_pol3_delta2  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.5   0.0   1.9e-14   1.4e-11       2     162 ..      50     200 ..      49     201 .. 0.87
   2 ?   -1.8   0.0       3.2   2.3e+03      70      99 ..     279     306 ..     235     311 .. 0.62

  Alignments for each domain:
  == domain 1  score: 44.5 bits;  conditional E-value: 1.9e-14
  DNA_pol3_delta2   2 qeealkilskalksgrlahayLfeGdegigkkelalnlakallceeknetkpcgecksckkieqgkhpDvivieteekersikldqirelieel 95 
                      q++++++l++ l+s +l h +Lf+G+ g+gk ++ l+lak+l+  e  +t          +++  +   + +++++ k       q+ +   + 
       KHJ33571.1  50 QDHTITVLQRNLRSSNLPH-MLFYGPPGTGKTSTVLALAKELFGPELYRT-------RVLELNASDERGISIVRSKIK--DFARMQLSQAPPQY 133
                      78899*************9.79**********************999877.......456666666666777776666..66666677777777 PP

  DNA_pol3_delta2  96 srkpreskkkiiiiedaekmtksAaNalLktlEEPsenaifiLitsdtnklLktirSRcqelkfspl 162
                       ++      kiii+++a+ mt+ A+ al +t+E+ s+ + f Li +  +++++++ SRc +++f+ l
       KHJ33571.1 134 RNRYPCPPFKIIILDEADSMTQDAQSALRRTMENYSKITRFCLICNYVTRIIDPLASRCSKFRFKML 200
                      777777899*******************************************************976 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 3.2
  DNA_pol3_delta2  70 Dvivieteekersikldqirelieelsrkp 99 
                       v +ie+     +i+ ++i++l + ++ k+
       KHJ33571.1 279 TVKIIEEIAG--VIPEETIQRLLQAMQPKS 306
                      3333333333..888888888888777665 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.0   1.6e-12   1.1e-09       1      72 [.      27      94 ..      27     188 .. 0.77
   2 ?   -3.2   0.0       9.5   6.8e+03      23      34 ..     348     359 ..     337     374 .. 0.67

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 1.6e-12
       Rad17  1 lkedenelWfekykPekaeelavhkkkieevkewlkadvLesrkkriLLisGPsGCgkstvvkvLskel.gik 72
                +k++++++W+eky+P+++ ++    + i  +++ l+++ L++      L  GP+G gk+ +v  L+kel g++
  KHJ33571.1 27 IKDNQFQPWVEKYRPKTLSDVTAQDHTITVLQRNLRSSNLPHM-----LFYGPPGTGKTSTVLALAKELfGPE 94
                6899*************************************98.....99*****************983444 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 9.5
       Rad17  23 vhkkkieevkew 34 
                 +hk+ki  +   
  KHJ33571.1 348 IHKNKITIIFSE 359
                 677777655444 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   3.4e-07   0.00024      12      51 ..      54      93 ..      48     128 .. 0.76
   2 ?    2.4   0.0      0.26   1.8e+02     135     161 ..     131     167 ..      98     177 .. 0.68
   3 ?    0.9   0.1      0.73   5.2e+02      67     124 ..     240     303 ..     211     318 .. 0.59

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 3.4e-07
      AAA_16 12 LlsalervrsgrpelvllsGesGvGKsslvrellralekd 51
                ++ + +++rs+  + +l++G++G+GK+s v +l+++l + 
  KHJ33571.1 54 ITVLQRNLRSSNLPHMLFYGPPGTGKTSTVLALAKELFGP 93
                4555566777778********************9998776 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.26
      AAA_16 135 r.........p.lvlvlDdlqwadeaslqllaaLlrl 161
                 +         p  +++lD+++   ++ +++l+ ++++
  KHJ33571.1 131 PqyrnrypcpPfKIIILDEADSMTQDAQSALRRTMEN 167
                 14555555543469999*9999999999999988876 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.73
      AAA_16  67 ipy...sa.laqalareellrqlldeaesaeleawrekleealaavpelagaea....srllellk 124
                 i++   +a l++a++   l+++ +++  + ++e + +  + +++++ e+ag ++    +rll++++
  KHJ33571.1 240 ITFlqsAArLIEAATPLNLIEAADNDRMEIDRENDGR--LVTVKIIEEIAGVIPeetiQRLLQAMQ 303
                 4443433336777777777777777744433333333..444445556666655433566655554 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.0     3e-08   2.1e-05       2      57 ..      40      90 ..      39     105 .. 0.85
   2 ?   -1.6   0.0       2.9     2e+03      86     111 ..     143     168 ..     141     171 .. 0.89

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 3e-08
      RuvB_N  2 rPksleeyigqekvkeklkifieaakkreealdhvllyGpPGlGkttlakiiakel 57
                rPk+l++ ++q++       ++   + r+++l h+l+yGpPG Gkt+    +akel
  KHJ33571.1 40 RPKTLSDVTAQDHTI-----TVLQRNLRSSNLPHMLFYGPPGTGKTSTVLALAKEL 90
                899999999998764.....45556789999*****************99999997 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.9
      RuvB_N  86 dvlfideihrlsraveevlysamedf 111
                 +++ +de   +++ ++  l  +me++
  KHJ33571.1 143 KIIILDEADSMTQDAQSALRRTMENY 168
                 58899******************998 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   8.5e-07   0.00061       7     127 ..      68     176 ..      62     183 .. 0.72
   2 ?   -1.0   0.0       2.8     2e+03      73      87 ..     293     307 ..     224     376 .. 0.71

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 8.5e-07
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalrarav..ielliiDEaqhl 103
                 +++ +G++GtGKT ++  l+++l     +e  r +v++ +++ + + + +++++  +          +   l +a  q+ +++     +++i+DEa+ +
  KHJ33571.1  68 HMLFYGPPGTGKTSTVLALAKEL---FGPELYRTRVLELNASDERGISIVRSKIKDFARM-------Q---LSQAPPQYRNRYPCppFKIIILDEADSM 153
                 6889******************9...3444488888888888888888888888777774.......2...333333333333335558********** PP

      AAA_22 104 rseealeeLrsllnlsrkgvqliL 127
                  +++a + Lr+ +++ +k +++ L
  KHJ33571.1 154 -TQDAQSALRRTMENYSKITRFCL 176
                 .88888888777766555555544 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 2.8
      AAA_22  73 lsseellealeqalr 87 
                  + ++ll+a++  ++
  KHJ33571.1 293 ETIQRLLQAMQPKSN 307
                 455555555554444 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   4.7e-07   0.00034      14      43 ..      61     102 ..      47     215 .. 0.72

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 4.7e-07
      AAA_11  14 lsese..itliqGPPGtgKTktivellsqll..........s 43 
                 l++s+    l+ GPPGtgKT+t+++l ++l           +
  KHJ33571.1  61 LRSSNlpHMLFYGPPGTGKTSTVLALAKELFgpelyrtrvlE 102
                 4444455589******************99765555444440 PP

>> AAA_assoc_2  AAA C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.2   6.5e-07   0.00047       3      41 ..     216     273 ..     215     303 .. 0.77

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 6.5e-07
                  X.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....................X CS
  AAA_assoc_2   3 kklkleddalealaeladGDaRkaLnlLElaaeaaeak...................e 41 
                  ++++le+ + e l+++a+GD Rka++ L+ aa+  ea+                   +
   KHJ33571.1 216 ESIALEEGVSEKLVNCAEGDLRKAITFLQSAARLIEAAtplnlieaadndrmeidreN 273
                  57899************************99999987666666666664444444443 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   1.2e-06   0.00089       7     113 ..      72     166 ..      68     177 .. 0.80

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 1.2e-06
     DUF2075   7 tGvaGtGKtvvllnllaeleddeeertavylsvNhplvl..vlrealakkeekkkkkeafeklssfinnlsefkkaeekkeepkedvvivDEAhrlltk 103
                  G +GtGKt   l+l+ el   e++rt+v+ +   +++   ++r++++  +    + +  + + ++ n++            p+++++i DEA  +++ 
  KHJ33571.1  72 YGPPGTGKTSTVLALAKELFGPELYRTRVLELNASDERGisIVRSKIKDFA----RMQLSQAPPQYRNRYP----------CPPFKIIILDEADSMTQD 156
                 799****************99999999999988877764338999996555....6667777888888888..........***************997 PP

     DUF2075 104 sdqaekqsee 113
                 +++a +++ e
  KHJ33571.1 157 AQSALRRTME 166
                 6665555444 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0     5e-06    0.0036       7      93 ..      71     171 ..      67     178 .. 0.73
   2 ?   -3.0   0.0       9.4   6.7e+03      55      73 ..     343     360 ..     306     367 .. 0.64

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 5e-06
      AAA_14   7 itGaRrvGKTtllkqlikell...vkkesilyinldderdkkladpe..kllelileklke........ekktylflDEiqev.pewekalkslvdegk 91 
                   G+  +GKT  +  l+kel+     + ++l++n  der  ++  ++  ++ ++ l+++ +        +  ++++lDE+  + +++++al++ +++++
  KHJ33571.1  71 FYGPPGTGKTSTVLALAKELFgpeLYRTRVLELNASDERGISIVRSKikDFARMQLSQAPPqyrnrypcPPFKIIILDEADSMtQDAQSALRRTMENYS 169
                 679999****************999999*********9995543322223444444442224445555656788******865378*********9985 PP

      AAA_14  92 nl 93 
                 ++
  KHJ33571.1 170 KI 171
                 54 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 9.4
      AAA_14  55 lileklkeekktylflDEi 73 
                 ++ + ++ ++k  +++ Ei
  KHJ33571.1 343 EYIADIH-KNKITIIFSEI 360
                 2222222.35666666666 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   8.6e-05     0.062       3      59 ..      45     105 ..      43     127 .. 0.69
   2 ?    3.0   0.0     0.078        56     109     138 ..     144     172 ..     143     192 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 8.6e-05
  Mg_chelatase   3 kdvkGqeeakrale..iaaaGgHnlllvGppGsGKtmlakrlpsll..pplseeealevak 59 
                   +dv+ q+++ ++l+  +  +   ++l++GppG+GKt    +l++ l  p+l ++ +le ++
    KHJ33571.1  45 SDVTAQDHTITVLQrnLRSSNLPHMLFYGPPGTGKTSTVLALAKELfgPELYRTRVLELNA 105
                   666666666666652244455669***********86555554322237777777777665 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.078
  Mg_chelatase 109 vLfLDElpefkrkvlevLRePledgevtis 138
                   +++LDE+  +++++  +LR+ +e+ + +i+
    KHJ33571.1 144 IIILDEADSMTQDAQSALRRTMENYS-KIT 172
                   689*******************9864.444 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   4.2e-06     0.003       5      95 ..      69     171 ..      66     186 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 4.2e-06
      AAA_24   5 iliyGpsgiGKTtlakel........gpkplfidtekGlksldadkfpdieswedfldevvel..........aaeladyktlviDtideleelclaev 85 
                 +l yGp+g+GKT++++ l         +++ ++ ++++  +   +   +i   +df                 +   +++k++++D +d + + +   +
  KHJ33571.1  69 MLFYGPPGTGKTSTVLALakelfgpeLYRTRVLELNASDERGISIVRSKI---KDFARM---QlsqappqyrnRYPCPPFKIIILDEADSMTQDAQSAL 161
                 789***********999989999999889999988886644333333333...333222...133347777776667889**********999999999 PP

      AAA_24  86 irqnekaesk 95 
                 +r  e+ +++
  KHJ33571.1 162 RRTMENYSKI 171
                 8887776666 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.7e-05     0.012       1      91 [.      68     167 ..      68     170 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.7e-05
                 EEEEE--SSSSHHHHHHHGGGGB..S--EEEEE--TT--HHHHH--B--..........--------......G-SEEEEESGGG--HHHHHHHHHHHH CS
       AAA_5   1 dvlLvGppGtgKselaerlaaal..nreveyvqltrdtteedlkgrreik.ngttslvdsplvraar......egeilvlDEveraesevlnsLlslle 90 
                 ++l  GppGtgK++ +  la+ l     + +  l  + + e  +  ++ k ++ ++++ s +  + r        +i++lDE + + ++++++L + +e
  KHJ33571.1  68 HMLFYGPPGTGKTSTVLALAKELfgPELYRTRVLELNASDERGISIVRSKiKDFARMQLSQAPPQYRnrypcpPFKIIILDEADSMTQDAQSALRRTME 166
                 6899****************9997655555555555444444444444334555555555555555588999888999999999999999999987776 PP

                 S CS
       AAA_5  91 e 91 
                 +
  KHJ33571.1 167 N 167
                 5 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   8.2e-06    0.0059      19     104 ..      36     120 ..      19     126 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 8.2e-06
      DUF815  19 veevdevklddLvgidkqkealventeqfleglpannvLLwGarGtGKSslvkallneyaeeg...Lrlievekedlkelpklvellre 104
                 ve++++ +l+d++  d+  + l++n    l+  +  ++L++G  GtGK s+v al +e+   +    r++e++ +d + ++ + +++++
  KHJ33571.1  36 VEKYRPKTLSDVTAQDHTITVLQRN----LRSSNLPHMLFYGPPGTGKTSTVLALAKELFGPElyrTRVLELNASDERGISIVRSKIKD 120
                 5555555666666666666666555....55677789*********************9988855568888888877777766666665 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.4e-05      0.01       3      70 ..      70     136 ..      68     157 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.4e-05
      AAA_28   3 vitGgestGKTtlleaLaargypvv.pEaareileeklakgedalpwv.edllafaervleeqleeeaaa 70 
                  + G+++tGKT+++ aLa++    + pE +r+ + e+ a++e+ +  v  ++ +fa+++l ++  +++++
  KHJ33571.1  70 LFYGPPGTGKTSTVLALAKE---LFgPELYRTRVLELNASDERGISIVrSKIKDFARMQLSQAPPQYRNR 136
                 689***************86...44489999988888888888888887888889998888776666655 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   0.00021      0.15       7      50 ..      49      92 ..      43     102 .. 0.86
   2 ?    1.0   0.0      0.54   3.9e+02     122     159 ..     131     170 ..      94     177 .. 0.65
   3 ?   -1.8   0.0       3.8   2.7e+03      93     113 ..     343     362 ..     294     370 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00021
                HHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S CS
      ResIII  7 yQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllk 50
                 Q + i+ l  +l s +  ++l+  + GtGKT + ++l+++l+ 
  KHJ33571.1 49 AQDHTITVLQRNLRSSNLPHMLFYGPPGTGKTSTVLALAKELFG 92
                5777788888888888889*********************9985 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.54
                 .....HHHTTT-SEEEEETGGGTTS...TTTHHHHHT--- CS
      ResIII 122 eeeseellrdrfdviiiDEaHrlgak..kswreilekfke 159
                  ++++++    f++ii DEa  ++++  ++ r+ +e++++
  KHJ33571.1 131 PQYRNRYPCPPFKIIILDEADSMTQDaqSALRRTMENYSK 170
                 56667777777889*****988888644355555555444 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 3.8
                 -B--.......-SEEEEEHHH CS
      ResIII  93 kkkakekdstnkkilvttiqs 113
                 +++a  ++++++ i++++i++
  KHJ33571.1 343 EYIA-DIHKNKITIIFSEIDK 362
                 3333.6788889999988876 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.9e-05     0.014      31      71 ..      64     105 ..      45     118 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.9e-05
       AAA_7  31 knkkpvllvGptGtGKtviikdllkkld.kekylsltinfsa 71 
                 +n  ++l++Gp GtGKt+++  l k+l  +e y + +++++a
  KHJ33571.1  64 SNLPHMLFYGPPGTGKTSTVLALAKELFgPELYRTRVLELNA 105
                 4445899***************88887547888888877776 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.0   8.6e-05     0.061      14     114 ..      62     167 ..      55     175 .. 0.63
   2 ?   -0.8   0.0       1.4     1e+03      88     117 ..     277     307 ..     228     313 .. 0.61

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 8.6e-05
      AAA_30  14 ltsgdrvavltGpAGtGKttalkal.reaweaaggrvigl...AptgkaAkvLaeelg.ieastiakllkrlkgrarlepgtllivDEagmvdtkqlaa 107
                  +s+   ++  Gp+GtGKt ++ al +e++  + +r  +l   A+ ++    ++ ++  ++ + + +   ++++r  + p +++i DEa  + ++   a
  KHJ33571.1  62 RSSNLPHMLFYGPPGTGKTSTVLALaKELFGPELYRTRVLelnASDERGISIVRSKIKdFARMQLSQAPPQYRNRYPCPPFKIIILDEADSMTQDAQSA 160
                 55555567889*******966555538888888666655511144444444444444424555555555555566677778999999998887777777 PP

      AAA_30 108 llkaaek 114
                 l + +e+
  KHJ33571.1 161 LRRTMEN 167
                 7666665 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.4
      AAA_30  88 pgtllivDE.agmvdtkqlaallkaaekaga 117
                   t+ i+ E ag++  +++++ll+a++ ++ 
  KHJ33571.1 277 LVTVKIIEEiAGVIPEETIQRLLQAMQPKSN 307
                 3366777774456677777777777776554 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00047      0.33       9      33 ..      65      89 ..      58      99 .. 0.83
   2 ?    0.6   0.0       0.9   6.5e+02     103     126 ..     142     166 ..     115     178 .. 0.66
   3 ?   -0.5   0.0         2   1.4e+03      95     129 ..     272     306 ..     212     312 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00047
      AAA_19  9 kekvllvtaGpGtGKTrvlkhival 33
                + +++l  ++pGtGKT ++ +  ++
  KHJ33571.1 65 NLPHMLFYGPPGTGKTSTVLALAKE 89
                5578999***********9887766 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.9
      AAA_19 103 eellivDEfqdvd.elqyrLlkall 126
                  +++i DE+  ++ + q +L +++ 
  KHJ33571.1 142 FKIIILDEADSMTqDAQSALRRTME 166
                 34899***98877466666655554 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 2
      AAA_19  95 eeekklqeeellivDEfqdvd..elqyrLlkallgek 129
                 e++  l   ++ i+ E+  v   e+++rLl+a+ +++
  KHJ33571.1 272 ENDGRL--VTVKIIEEIAGVIpeETIQRLLQAMQPKS 306
                 222333..34667888887765678889999988665 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0       0.9   6.4e+02      53      88 ..       2      38 ..       1      48 [. 0.84
   2 ?   11.4   0.0   0.00045      0.32       2      23 ..      70      91 ..      69     122 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.9
  RNA_helicase 53 vvidDfgqvkdee.npsdlaelirlvsstpyplnmas 88
                  v ++D++++k+ +   +d++ +  +++ +++++ + +
    KHJ33571.1  2 VSFFDLKARKQAAaASNDVSSKTSAIKDNQFQPWVEK 38
                  6799******9998888*******9999999986655 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00045
  RNA_helicase  2 wlyGpsgeGKStlakeLakall 23
                  ++yGp+g+GK++++  Lak+l 
    KHJ33571.1 70 LFYGPPGTGKTSTVLALAKELF 91
                  79****************9987 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00015      0.11       1      88 [.      68     167 ..      68     174 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00015
       AAA_3   1 hvllegvPGlaktllvkalakal.dlefkriqftpdllPsdilGtevfeekekef...efkkGp.vfan........llladeinrappktqsalleam 86 
                 h+l+ g PG++kt +v alak l + e+ r ++  +l  sd  G++++++k k+f   ++++ p  + n        +++ de +  +  +qsal  +m
  KHJ33571.1  68 HMLFYGPPGTGKTSTVLALAKELfGPELYRTRV-LELNASDERGISIVRSKIKDFarmQLSQAPpQYRNrypcppfkIIILDEADSMTQDAQSALRRTM 165
                 99******************9763678888876.57999999999999998855511134333313322222222227778888888888888888888 PP

       AAA_3  87 ee 88 
                 e+
  KHJ33571.1 166 EN 167
                 76 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   0.00011      0.08       3      66 ..      71     167 ..      70     221 .. 0.72
   2 ?   -2.3   0.0       8.4     6e+03      28      44 ..     258     274 ..     224     321 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 0.00011
      AAA_18   3 ltGtpGvGKttlakeLskrlgf....................gvnlrdvakenglllevdpe..............aldeskrldedkldklldalee 66 
                   G+pG+GKt+   +L+k+l f                    +++ +++    ++ l++ p+               lde + + +d + +l +++e+
  KHJ33571.1  71 FYGPPGTGKTSTVLALAKEL-FgpelyrtrvlelnasdergiSIVRSKIKDFARMQLSQAPPqyrnrypcppfkiiILDEADSMTQDAQSALRRTMEN 167
                 57****************98.44577777777666666666644445555555555555555555556666666666666666666666666665555 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 8.4
      AAA_18  28 lrdvakenglllevdpe 44 
                 l++ a +++++++++++
  KHJ33571.1 258 LIEAADNDRMEIDREND 274
                 44444444444444444 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0     0.005       3.6      21      44 ..      68      91 ..      45     128 .. 0.74
   2 ?    2.5   0.1      0.12        83     122     140 ..     144     161 ..     142     173 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.005
                EEEEE--TTSSTTHHHHHHHHHHH CS
        PhoH 21 ivfaiGpaGtGKtylavalaveal 44
                 +   Gp GtGKt   +ala e++
  KHJ33571.1 68 HMLFYGPPGTGKTSTVLALAKELF 91
                56779********99998887766 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.12
                 EEEE-SGGG--HHHHHHHH CS
        PhoH 122 fvilDEAQnttkeqmkmfl 140
                 ++ilDEA ++t+      l
  KHJ33571.1 144 IIILDEADSMTQDAQSA-L 161
                 79********9876444.3 PP

>> DUF4863  Domain of unknown function (DUF4863)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00051      0.37       5      52 ..     281     329 ..     278     335 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00051
     DUF4863   5 ellaeiedltldkeleerLneeygpgs.elyedlaklirqgveegWvae 52 
                 ++++ei++  +++++++ L +  ++ + ++y+d+++++ + v++gW  +
  KHJ33571.1 281 KIIEEIAGVIPEETIQRLLQAMQPKSNrAIYADVSNVVANLVADGWSGS 329
                 7899***************99888755279****************765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      648  (0.0361426); expected 358.6 (0.02)
Passed Vit filter:                        97  (0.00541023); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 2588.24
//
Query:       KHJ33572.1  [L=435]
Description: hypothetical protein EV44_g0351 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-05   22.6   1.7    9.4e-05   22.6   1.7    1.8  2  Podoplanin  Podoplanin
  ------ inclusion threshold ------
      0.015   14.7   1.8      0.017   14.6   0.2    1.8  2  Rax2        Cortical protein marker for cell polarity
      0.021   13.6   0.1      0.041   12.7   0.0    1.4  2  Amnionless  Amnionless
      0.028   13.8   0.7      0.048   13.1   0.7    1.3  1  DUF5305     Family of unknown function (DUF5305)
       0.11   13.5   1.7       0.19   12.7   0.0    2.2  2  DUF5302     Family of unknown function (DUF5302)
       0.15   12.2   0.4        2.6    8.2   0.0    2.8  4  DUF2407_C   DUF2407 C-terminal domain
       0.27   10.8   1.0        0.5   10.0   1.0    1.4  1  Saf_2TM     SAVED-fused 2TM effector domain


Domain annotation for each model (and alignments):
>> Podoplanin  Podoplanin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.2       2.5   6.5e+03      92     114 ..      47      69 ..      38      81 .. 0.54
   2 !   22.6   1.7   3.7e-08   9.4e-05      86     155 ..     191     260 ..     165     264 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.5
                 XXXXXXXXXXXXXXXXXXXXXXX CS
  Podoplanin  92 akeesqstttlnvvtshstekvg 114
                  + + + tt++++v+  s+   +
  KHJ33572.1  47 VGYQVNLTTAQSTVSGLSIVLCQ 69 
                 34445555666666655554433 PP

  == domain 2  score: 22.6 bits;  conditional E-value: 3.7e-08
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Podoplanin  86 aestvkakeesqstttlnvvtshstekvgeetettvekdGLatvtLvgiivGvllaigfiggiiivvvrk 155
                   st  a  ++ + +t++  ts+st++ +       +k GL+t++++gi  G+     +ig i +v++r+
  KHJ33572.1 191 ITSTKSALLQTSTPATTSLSTSTSTSTSTSTSLSLKKKKGLSTASVIGIAFGIFSIFLLIGLIGLVLLRR 260
                 456666666666677777788888666666666667899***********99875555555555555555 PP

>> Rax2  Cortical protein marker for cell polarity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.49   1.2e+03      66      96 ..      54      85 ..      42      98 .. 0.74
   2 ?   14.6   0.2   6.5e-06     0.017     137     200 ..     207     270 ..     127     280 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.49
        Rax2 66 lgesttirglqvlslt.nshsssdlldknqvL 96
                ++ ++t++gl+++  + ++++s d +++ qvL
  KHJ33572.1 54 TTAQSTVSGLSIVLCQtSDKKSVDATNSWQVL 85
                467899999*9998884555556667777777 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 6.5e-06
        Rax2 137 ssifleksnsfssssdlk.kkkkklsrgfVVlIgLAlALgtvallgllgiilayirkkregyepa 200
                 +s+ ++ s+s s+s++l+ kkkk ls+  V++I++++   + +l+gl+g++l +    ++  + a
  KHJ33572.1 207 TSLSTSTSTSTSTSTSLSlKKKKGLSTASVIGIAFGI-FSIFLLIGLIGLVLLRRSSAKKRAQAA 270
                 22222233333333333359999*************9.789999******998866666655554 PP

>> Amnionless  Amnionless
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       1.7   4.4e+03     189     211 ..     130     152 ..     111     153 .. 0.75
   2 ?   12.7   0.0   1.6e-05     0.041     324     400 ..     210     287 ..     188     314 .. 0.65

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 1.7
  Amnionless 189 escsdpsgCeCgnselleeiCaa 211
                  s+ +   C+ +++++++ iC +
  KHJ33572.1 130 DSLDNFFLCTSHEDTTQNTICDY 152
                 56666778999999999999975 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 1.6e-05
  Amnionless 324 saeletsgasssdssaagapgesaglvlgivfglvlllllllillllllrrkgvl.rlpqllkspsrreeveelkakl 400
                 s++  ts+++s++ s  +++g s+++v+gi fg+  + ll+ ++ l+llrr++   r +  ++ + ++ + ++lk+++
  KHJ33572.1 210 STSTSTSTSTSTSLSLKKKKGLSTASVIGIAFGIFSIFLLIGLIGLVLLRRSSAKkRAQAAHSLSIKSFTKSHLKTEK 287
                 334444555555555445999*************66666666777777777777535555444444555555555443 PP

>> DUF5305  Family of unknown function (DUF5305)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.7   1.9e-05     0.048      83     141 ..     203     266 ..     188     283 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.9e-05
     DUF5305  83 teqtyeikkdetdeengeitetvtvkespslae.....gilliilgllaliglvvlirriifts 141
                 t  t++++++++ ++++++  + ++k+  s+a+     +++++i++l++liglv+l+r+  +++
  KHJ33572.1 203 TPATTSLSTSTSTSTSTSTSLSLKKKKGLSTASvigiaFGIFSIFLLIGLIGLVLLRRSSAKKR 266
                 6679999999999999999999999999999998865555666666666666666655533322 PP

>> DUF5302  Family of unknown function (DUF5302)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.5       2.3   5.8e+03      14      28 ..     258     272 ..     258     287 .. 0.72
   2 ?   12.7   0.0   7.5e-05      0.19      31      52 .]     327     348 ..     323     348 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 2.3
     DUF5302  14 LerKnakaasaaaha 28 
                 L r +ak++++aah+
  KHJ33572.1 258 LRRSSAKKRAQAAHS 272
                 667788888888886 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 7.5e-05
     DUF5302  31 gskvhgahGpaaakReFRRKSG 52 
                 ++ ++ga  +  + R+FRRKSG
  KHJ33572.1 327 AAGIKGATDNEVHLRDFRRKSG 348
                 57899999999**********9 PP

>> DUF2407_C  DUF2407 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.36   9.2e+02      79      99 ..      67      93 ..      41      95 .. 0.71
   2 ?   -3.6   0.0       4.4   1.1e+04       6      36 ..     119     149 ..     116     158 .. 0.76
   3 ?    8.2   0.0     0.001       2.6      79     118 ..     216     256 ..     188     264 .. 0.66
   4 ?   -1.6   0.0       1.1   2.8e+03       6      22 ..     399     415 ..     385     431 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.36
   DUF2407_C 79 e......nsvdseeskanedlliGlli 99
                       +svd+++s +  dll G+++
  KHJ33572.1 67 LcqtsdkKSVDATNSWQVLDLLSGFCL 93
                04444558999*************996 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 4.4
   DUF2407_C   6 LlsaGfseeeieaLRsqFrsiygseetpdtm 36 
                 L++aGf +   ++L + F  +  +++t++t 
  KHJ33572.1 119 LKDAGFNSTGDDSLDNFFLCTSHEDTTQNTI 149
                 7788888888888888888888877777765 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.001
   DUF2407_C  79 e.nsvdseeskanedlliGlliGfflglfalllllkeegll 118
                 + ++  s + k+++ l  + +iG+ +g+f+++ll+   gl+
  KHJ33572.1 216 StSTSTSLSLKKKKGLSTASVIGIAFGIFSIFLLIGLIGLV 256
                 1222334566778889999***********99998777666 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 1.1
   DUF2407_C   6 LlsaGfseeeieaLRsq 22 
                 L+++G+s+ee++ L   
  KHJ33572.1 399 LREEGMSAEEMARLEDE 415
                 67888888888877655 PP

>> Saf_2TM  SAVED-fused 2TM effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.0   0.00019       0.5      35      96 ..     201     266 ..     185     278 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00019
     Saf_2TM  35 ailgtdwalkialkla.ggslevsfssse..ipeivlaiilvigvllivvGav.llilryvneakr 96 
                  +  ++++l+ ++ +  ++s ++s+++++  + + v  i++ i+++++++G++ l +lr    +kr
  KHJ33572.1 201 TSTPATTSLSTSTSTStSTSTSLSLKKKKglSTASVIGIAFGIFSIFLLIGLIgLVLLRRSSAKKR 266
                 33333777777777777999*****9998889999****************763444444233333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       896  (0.0499749); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3101.79
//
Query:       KHJ33573.1  [L=1276]
Description: putative ph domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-08   34.2   0.2    1.3e-06   28.8   0.0    3.3  3  PH        PH domain
     0.0041   17.5   0.0      0.012   16.0   0.0    1.9  1  PH_9      Pleckstrin homology domain


Domain annotation for each model (and alignments):
>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.0   1.5e-10   1.3e-06       3     104 ..     114     228 ..     112     229 .. 0.90
   2 ?   -0.9   0.1      0.26   2.4e+03      17      37 ..     277     306 ..     265     340 .. 0.60
   3 ?    0.7   0.0     0.081   7.3e+02       6      37 ..     444     485 ..     432     543 .. 0.75

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 1.5e-10
                 EEEEEEEETSSSSC.......SEEEEEEEEETTEEEEESST....TCTTESSEEEEEESTTEEEEEEEC...TTSSSSTSEEEEEESTSSSTEEEEEEE CS
          PH   3 keGwLlkkgsgkkk.......swkkrwfvLkdsellyyknd....ksekdkepkgsislsncevvevva...tedpkrkfcfelriverngsrtyllqa 87 
                  eG++lk + ++         +w ++++ L +++l+++++      +   + + ++i+ls+++++ ++     ++++ + + +l i++ ++ ++yll++
  KHJ33573.1 114 QEGYFLKLDDQNTQgkpnpdrIWTECFAQLVGTVLSLWDAAeldiVGQDGEVLPKFINLSDASIKMIESlstRSQTDAPLQNVLSISTAGK-NRYLLHF 211
                 69998887777777788999************************999999999************9999**54488888888888888788.******* PP

                 SSHHHHHHHHHHHHHHH CS
          PH  88 sseeerkeWikaiqsai 104
                 +s  ++ +W + i+ a+
  KHJ33573.1 212 NSHHSLIQWTAGIRLAM 228
                 ************99886 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.26
                 SEEEEEEEEETTE...EEEESST......T CS
          PH  17 swkkrwfvLkdse...llyyknd......k 37 
                  w+++w+v++  +   ++ ++++      +
  KHJ33573.1 277 PWRRCWCVISPADekeVIKWQKQwkkspyD 306
                 699999999865556644444444554441 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.081
                 EEEEETSSSSC..SEEEEEEEEETTEEEEESST........T CS
          PH   6 wLlkkgsgkkk..swkkrwfvLkdsellyyknd........k 37 
                  +l+ gs + k  +w+kr   L+ ++++  ++d        +
  KHJ33573.1 444 LILEEGSLNWKesQWRKRMKELTAKRMIAIESDsradsrlgS 485
                 4557777777778**********9998888877555544443 PP

>> PH_9  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.3e-06     0.012      13     112 ..     123     222 ..     113     227 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.3e-06
        PH_9  13 eskgkktplkkrgWkevyavlkklvLylykdee....esesaetedlkslknakllgkirlhhaLaekasdYkkkshvFrLqtadgaeylfqtsdakev 107
                 +++++ +p  +r W e++a+l ++vL l    e     +  + ++++ +l++a    +i+++ +L+++++     ++v  + ta +  yl+  +++  +
  KHJ33573.1 123 DQNTQGKPNPDRIWTECFAQLVGTVLSLWDAAEldivGQDGEVLPKFINLSDA----SIKMIESLSTRSQTDAPLQNVLSISTAGKNRYLLHFNSHHSL 217
                 5677778889********************98844443333334444556666....9**********9888899************************ PP

        PH_9 108 qeWvd 112
                  +W  
  KHJ33573.1 218 IQWTA 222
                 99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       924  (0.0515366); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.28s 00:00:01.04 Elapsed: 00:00:00.43
# Mc/sec: 8958.14
//
Query:       KHJ33574.1  [L=200]
Description: putative rho gdp-dissociation inhibitor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.6e-65  219.0   0.9    5.4e-65  218.8   0.9    1.0  1  Rho_GDI   RHO protein GDP dissociation inhibitor


Domain annotation for each model (and alignments):
>> Rho_GDI  RHO protein GDP dissociation inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.8   0.9     3e-69   5.4e-65      12     195 .]      13     199 ..       3     199 .. 0.94

  Alignments for each domain:
  == domain 1  score: 218.8 bits;  conditional E-value: 3e-69
     Rho_GDI  12 eeekklklgpqkslkeqleldkdDesLrryKeqL.Lgsakvdleavetnepevkilkltilsserpdevleldlted..leklkkkaftlkegseyklk 107
                 e+++ +k+g++k+++e+++ld+dDe+++ryK +L Lg +  d  ++++n+p+ +i+ ++++ s+ + e++++dl+e+  +++lk+k+f++keg+++++ 
  KHJ33574.1  13 EQTEGFKVGEKKTIDEYQKLDADDEAMQRYKRSLgLGGDGKD--ISDPNDPRQCIILSLTMDSQGR-EPVTIDLSEKgsETTLKDKPFKIKEGTKFSMT 108
                 566899*******************************98876..66*******9999999988888.9999*99988778899**************** PP

     Rho_GDI 108 isFkvsneivsGlkYvqtvwktgvkvdkskemlGsysPqqee...yeyeleeeeaPsGllarGsYsakskfvDDDkkvyleleysfeikkd 195
                 ++Fkv++ei+sGl+Yvq v+++g++v k +em+Gsy+P++++   y++ ++ee+aPsG+larG+Y+a s+f+DDDkk++l++e++f+i+kd
  KHJ33574.1 109 AKFKVQHEILSGLHYVQIVKRKGIRVSKDQEMIGSYAPNTDKnpfYTKRFAEEDAPSGMLARGHYTAVSTFIDDDKKTHLQFEWAFDIAKD 199
                 ****************************************9999*********************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1635.94
//
Query:       KHJ33575.1  [L=562]
Description: hypothetical protein EV44_g5763 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.9e-05   23.9   0.6      7e-05   22.7   0.6    1.7  1  zf-CCHC      Zinc knuckle
     0.0073   15.7   0.2      0.041   13.3   0.2    2.4  1  Vps36-NZF-N  Vacuolar protein sorting 36 NZF-N zinc-finger do
  ------ inclusion threshold ------
       0.01   15.7   3.3      0.027   14.3   3.3    1.8  1  zf-CCHC_2    Zinc knuckle
      0.021   14.5   0.3      0.021   14.5   0.3    2.4  2  AGA2         A-agglutinin-binding subunit Aga2


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.6   1.6e-08     7e-05       2      18 .]      22      38 ..      21      38 .. 0.94

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 1.6e-08
                CTSSSSSSSSTTTTSTS CS
     zf-CCHC  2 kCynCGepGHiardCpk 18
                +C+nCG pGH+   Cp+
  KHJ33575.1 22 VCFNCGIPGHFVVACPH 38
                8***************8 PP

>> Vps36-NZF-N  Vacuolar protein sorting 36 NZF-N zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.2   9.2e-06     0.041      27      45 ..      10      32 ..       1      35 [. 0.74

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 9.2e-06
  Vps36-NZF-N 27 p....nastplPpClaCGvkpdl 45
                 p    na +p P+C +CG++  +
   KHJ33575.1 10 PqdrrNALNPPPVCFNCGIPGHF 32
                 234458999**********9765 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   3.3   6.1e-06     0.027       5      20 ..      22      37 ..      22      38 .. 0.96

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 6.1e-06
   zf-CCHC_2  5 vChiCgkkGHyIqdCP 20
                vC  Cg++GH++  CP
  KHJ33575.1 22 VCFNCGIPGHFVVACP 37
                8**************9 PP

>> AGA2  A-agglutinin-binding subunit Aga2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   1.2      0.22     1e+03      32      50 ..     208     227 ..     206     234 .. 0.74
   2 ?   14.5   0.3   4.7e-06     0.021      10      38 ..     530     558 ..     524     559 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.22
        AGA2  32 yYrSvtYvsn.Cdttttkae 50 
                  YrSvt  +n C++ +++++
  KHJ33575.1 208 SYRSVTTCENiCGSPSSTGK 227
                 5****998887986655544 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 4.7e-06
        AGA2  10 TPYStsTttilangksmvgVteyYrSvtY 38 
                 T++S+s t+  +n+   v +++ YrSv Y
  KHJ33575.1 530 TAFSVSDTSKNKNHACEVSIFAAYRSVSY 558
                 9**************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (562 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1079  (0.0601818); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.21s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 4397.36
//
Query:       KHJ33576.1  [L=810]
Description: putative ap-3 adaptor complex subunit beta [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.6e-96  321.9  12.7    8.3e-96  321.6  12.7    1.1  1  Adaptin_N     Adaptin N terminal region
    5.1e-17   62.4   1.1    4.8e-15   56.0   0.0    3.5  3  Cnd1          non-SMC mitotic condensation complex subunit 1
    3.2e-10   39.4   0.0      0.061   13.6   0.0    5.3  4  HEAT          HEAT repeat
    7.5e-09   35.9   0.5     0.0014   19.0   0.0    4.8  6  HEAT_2        HEAT repeats
    1.1e-06   28.8   0.4      0.077   13.3   0.3    2.9  2  Cohesin_HEAT  HEAT repeat associated with sister chromatid co
     0.0071   16.3   0.1       0.06   13.3   0.0    2.5  2  HTH_36        Helix-turn-helix domain
  ------ inclusion threshold ------
      0.068   13.7   0.1         19    5.9   0.0    4.1  5  HEAT_EZ       HEAT-like repeat
        0.1   12.5   3.6       0.71    9.8   0.5    2.9  2  Sec7_N        Guanine nucleotide exchange factor in Golgi tra
       0.15   12.0   0.0       0.57   10.2   0.0    2.0  1  Carla_C4      Carlavirus putative nucleic acid binding protei
        3.1    7.6  10.5        5.1    6.9  10.5    1.3  1  CNDH2_C       Condensin II complex subunit CAP-H2 or CNDH2, C


Domain annotation for each model (and alignments):
>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  321.6  12.7   4.6e-99   8.3e-96       6     520 ..      37     623 ..      32     627 .. 0.93

  Alignments for each domain:
  == domain 1  score: 321.6 bits;  conditional E-value: 4.6e-99
                 CHHHHHHCCSSS-SCHHHHHHHHHHHHHHHCT---GHHHHHHHCCCCSS-CHHHHHHHHHHHHHCTTSCCHHCCCCHHHHHHCCSSSHHHHHHHHHHHC CS
   Adaptin_N   6 qqelaeilnsnkdddekkkeavkkliylialGedvsflffevvklvaskdfelKrlvYlylellaeesedlalLvtnslqkDlkdpnqlirglALrvLs 104
                  ++++++l+s+  +d++ ++ ++k+i +++++++    f ++vk+vas ++e+K+lvY+yl   ae+++ lalL++n++qk+l+d n+ +r+lAL+++s
  KHJ33576.1  37 DSQIRKLLDSR--NDREILDGLRKVISMMYRSQPCLTFFSSIVKNVASPNIEIKKLVYIYLLSHAEQEQSLALLSINTIQKSLSDHNPQVRALALKTMS 133
                 578999*****..************************************************************************************** PP

                 CC--CCCHHHHHHHHHHHHT-SSHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCTT-SSHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHC CS
   Adaptin_N 105 sirvpelaedlapaikkllkdrspyvrkkAalailklykkdpdllrkqlveeikellsdkdpgvvlaAvalleeikkndrlllkllpklvrrLcnllte 203
                  irvp +++++  aikk l+d+sp+vr++Aalai+k+y++dp  l++ l   +  ll d+++ v +aAv+++ ei +++r+  +l++k++ +L + +t+
  KHJ33576.1 134 GIRVPVISKIVSLAIKKGLSDMSPSVRRAAALAIPKCYRLDPGMLSE-LQGYLSILLGDNQYNVAGAAVKAFMEI-CPERI--DLIHKHYYKLVKSITD 228
                 *********************************************88.588888888******************.*****..**************** PP

                 S-HHHHHHHHHHHCC---SSHHHH.....................................HHHHHHHCGGCGCSSCHHHHHHHHHCCHCCCCSTHHHC CS
   Adaptin_N 204 ldpwlqvkiiklltrlarqepeer...................................skkellesllnllqssnnaVlletvnlivelapknelivl 267
                 +d+w q+  +kl+  ++r+ +++                                    + + ll+s+++ll s+n aV+ ++v+++++l  ++  i  
  KHJ33576.1 229 MDEWSQLATLKLMITYSRKCFPKItrqvnkndkktkdfygdngveitgetqetiqilapDLEFLLKSIKSLLFSRNSAVIVAVVRCYIYLGTQDY-IDE 326
                 ******************999999999*************9999999998877777765337799************************999988.9** PP

                 CHHCHHHHHHSSCCTCHHHHHCHHHHHHHHXXTTTTTTTCCCCSXXTTSXHHHHHHHHHHHCCCXXTTTHHH...HHHHHHHHTTSSXXHHHHHHHHHH CS
   Adaptin_N 268 avnaLvrllsskdenlryvaLrtllkivkkepkavqhldlkifllktdddvsirlkaldlllklvdesNvke...ivkeLkkyvkevadedfksklvka 363
                  + aL  ll+ ++  ++  aL ++ +++  + +a + ++l +fl+ t+d+     ++l++l+ +    N ++   i++eL  ++++++   + +k+++a
  KHJ33576.1 327 SIGALMALLRGPQD-IQQTALFNIISVCLDK-PASFVRYLTYFLIHTTDSLRTMELKLEILTLIFPHCNFRIkslILNELEHFASNASQIKLAQKVIQA 423
                 **************.****************.999**********************************988888************************ PP

                 HHHHHHHSCCHHHHHHHHHHHHHTTXXHHHHHHHHHHHHHHHHHSTTTSTTCHHHHCCTCCGXXSHHHHHHHHHHHHHTTTTXTT...HHHHHHCTTTT CS
   Adaptin_N 364 IgrlaekfatdaewvldvllellslsgesvkdeivevirdliqkvpelheeiiekLaellekieseearaaaiWllGeygelvsntesasdllrslaek 462
                 Igr+a++  +  ++++ +ll  +++ ++ +++e+  vir liq+ p +++++i +L+++l++ ++++ara++iWl+Ge++ + s+++ a+d+lr l + 
  KHJ33576.1 424 IGRCAQSDSKTSSRCMHILLGKMKSVDQDLVEESTIVIRHLIQRDPGSQAKTIIRLIKHLQSTSNPKARASIIWLVGEFAGNDSDNNVAADVLRILVKG 522
                 ************************************************************************************855************ PP

                 TTTSXHHHHHHHHHHHHHHH.......................HCXGCC.THX...........................HHHHHHHHHHH.XXSHHHH CS
   Adaptin_N 463 fvlesekvklqiltalvKly.......................ltspdketqe...........................kliqlvlslat.ssdlevr 510
                 f +e e+vklqi+ +++K y                       +                                     l ++v+ la+ ++++++r
  KHJ33576.1 523 FAEEAEMVKLQIVLLAAKVYlhylnyleqensnlqsdgvsldnQ--------LeptgnrinedlktnlttstskfnhpivTLWNYVTLLARyDTSYDLR 613
                 ********************888877666666655555555551........0555555556666666677777888899************99***** PP

                 HHHHHHHHHH CS
   Adaptin_N 511 dRaveylqll 520
                 dR + y++l+
  KHJ33576.1 614 DRIRLYKSLF 623
                 ******9998 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.0   2.7e-18   4.8e-15       2     129 ..     124     247 ..     123     258 .. 0.93
   2 ?   -1.8   0.0       1.6   2.8e+03     112     146 ..     393     425 ..     334     460 .. 0.58
   3 ?    2.3   0.0     0.088   1.6e+02      41      91 ..     457     508 ..     445     538 .. 0.74

  Alignments for each domain:
  == domain 1  score: 56.0 bits;  conditional E-value: 2.7e-18
        Cnd1   2 iRalairtlgcirvpnlveylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteiseksenaiynllpdi 100
                 +Rala++t++ irvp +   ++  ++k+L+D +p VR+ aa+++ k ++ d    +++   l  ll D++ +V   a+ a++ei  +     + l ++ 
  KHJ33576.1 124 VRALALKTMSGIRVPVISKIVSLAIKKGLSDMSPSVRRAAALAIPKCYRLDPGMLSELQGYLSILLGDNQYNVAGAAVKAFMEICPER----IDLIHKH 218
                 9**********************************************77777777777799************************998....7788899 PP

        Cnd1 101 isklsdalnecsewgqitilefLlsyipk 129
                 ++kl++++++++ew+q   l+++++y  k
  KHJ33576.1 219 YYKLVKSITDMDEWSQLATLKLMITYSRK 247
                 999999999***************99765 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.6
        Cnd1 112 sewgqitilefLlsyipkdkqeaeslveklcprlq 146
                 +      il+ L ++ ++ +q   +l++k+++ + 
  KHJ33576.1 393 NFRIKSLILNELEHFASNASQ--IKLAQKVIQAIG 425
                 444444444444444444444..444444444433 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.088
        Cnd1  41 aaivvakLilndmvkekgflselakll.eDenprVvanalaalteiseksen 91 
                   iv+ +Li++d   + + + +l k l + +np+ +a+ + +  e + ++++
  KHJ33576.1 457 STIVIRHLIQRDPGSQAKTIIRLIKHLqSTSNPKARASIIWLVGEFAGNDSD 508
                 5689999*****9998887777777775889999999999999999988532 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   3.4e-05     0.061       2      25 ..     110     133 ..     110     135 .. 0.89
   2 !   11.7   0.0   0.00014      0.24       5      24 ..     148     167 ..     143     172 .. 0.87
   3 ?    4.7   0.0     0.024        43       8      29 ..     188     209 ..     181     210 .. 0.88
   4 ?    2.2   0.0      0.16   2.8e+02       5      28 ..     479     503 ..     476     505 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.4e-05
                 HHHHHHHHT-SSHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLg 25 
                 +++++k lsD +p+VR+ A+k++ 
  KHJ33576.1 110 INTIQKSLSDHNPQVRALALKTMS 133
                 5789****************9976 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00014
                 HHHHHT-SSHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaL 24 
                 + k lsD sp+VR+aAa+a+
  KHJ33576.1 148 IKKGLSDMSPSVRRAAALAI 167
                 6789**************98 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.024
                 HHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   8 llsDpspeVReaAakaLgalae 29 
                 ll D+  +V  aA+ka+ ++++
  KHJ33576.1 188 LLGDNQYNVAGAAVKAFMEICP 209
                 789*****************96 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.16
                 HHHHHT-.SSHHHHHHHHHHHHHHH CS
        HEAT   5 llkllsD.pspeVReaAakaLgala 28 
                 l+k l++ ++p+ R++ ++ +g++a
  KHJ33576.1 479 LIKHLQStSNPKARASIIWLVGEFA 503
                 6778877699999*********997 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   1.2e-05     0.021      33      86 ..     110     166 ..      80     167 .. 0.62
   2 !   19.0   0.0   7.7e-07    0.0014       6      86 ..     115     203 ..     109     205 .. 0.76
   3 !   11.1   0.0   0.00022      0.39       6      59 ..     150     208 ..     144     233 .. 0.75
   4 ?   -1.4   0.0       1.8   3.2e+03      36      76 ..     296     340 ..     287     347 .. 0.73
   5 ?   -0.1   0.0      0.71   1.3e+03       3      31 ..     403     431 ..     401     454 .. 0.75
   6 !    7.5   0.0    0.0031       5.5       4      55 ..     479     538 ..     461     551 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.2e-05
      HEAT_2  33 lpaLvellededpavRraaaeaLgaigdpe....alpaLkellddddddvvReaAaea 86 
                 ++++ + l+d++p vR+ a ++++ i+ p     +  a k+ l d + +v R+aAa a
  KHJ33576.1 110 INTIQKSLSDHNPQVRALALKTMSGIRVPViskiVSLAIKKGLSDMSPSV-RRAAALA 166
                 56677777777777777777777777643222114444455554444444.4444444 PP

  == domain 2  score: 19.0 bits;  conditional E-value: 7.7e-07
      HEAT_2   6 qalendpdpevrraairaLgrignp...ealpaLve.llededpavRraaaeaLgaig..dpealpaLkell...ddddddvvReaAaea 86 
                 + l +d +p+vr+ a++++  i+ p   +++ + ++  l+d +p vRraaa a+ ++   dp  l+ L+ +l   + d+ + v  aA++a
  KHJ33576.1 115 KSL-SDHNPQVRALALKTMSGIRVPvisKIVSLAIKkGLSDMSPSVRRAAALAIPKCYrlDPGMLSELQGYLsilLGDNQYNVAGAAVKA 203
                 445.8999************99999666777777766889999***********999755588888887744222567777777777766 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 0.00022
      HEAT_2   6 qalendpdpevrraairaLg...rignp....ealpaLvellededpavRraaaeaLgaig 59 
                 + l +d +p vrraa+ a+    r  +p    e++ +L  ll d   +v  aa++a  +i 
  KHJ33576.1 150 KGL-SDMSPSVRRAAALAIPkcyR-LDPgmlsELQGYLSILLGDNQYNVAGAAVKAFMEIC 208
                 456.78999999999999995532.333466678888888889999999999999877775 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 1.8
      HEAT_2  36 LvellededpavRraaaeaLgaigd....pealpaLkellddddd 76 
                 + +ll + ++av  a+++    +g+    +e++ aL +ll+ ++d
  KHJ33576.1 296 IKSLLFSRNSAVIVAVVRCYIYLGTqdyiDESIGALMALLRGPQD 340
                 566777788888888888777777633456688899998888876 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 0.71
      HEAT_2   3 aLlqalendpdpevrraairaLgrignpe 31 
                  L  +++n +  ++++++i+a+gr++  +
  KHJ33576.1 403 ELEHFASNASQIKLAQKVIQAIGRCAQSD 431
                 66777778888889999999999776543 PP

  == domain 6  score: 7.5 bits;  conditional E-value: 0.0031
      HEAT_2   4 LlqalendpdpevrraairaLgri.gnp.......ealpaLvellededpavRraaaeaL 55 
                 L++ l++ ++p+ r+ +i+  g++ gn+       ++l++Lv+    e ++v  +++  +
  KHJ33576.1 479 LIKHLQSTSNPKARASIIWLVGEFaGNDsdnnvaaDVLRILVKGFAEEAEMVKLQIVLLA 538
                 777888888888888888888865233344555556666666666667777777666655 PP

>> Cohesin_HEAT  HEAT repeat associated with sister chromatid cohesion
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   8.4e-05      0.15      21      41 ..     111     131 ..     110     131 .. 0.93
   2 !   13.3   0.3   4.3e-05     0.077      17      38 ..     142     163 ..     139     163 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 8.4e-05
                   HHHHHHHHSS-HHHHHHHHHH CS
  Cohesin_HEAT  21 dtiarrltDsspsVRdAaLel 41 
                   +ti++ l+D  p+VR+ aL++
    KHJ33576.1 111 NTIQKSLSDHNPQVRALALKT 131
                   89****************986 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 4.3e-05
                   HHHHHHHHHHHHSS-HHHHHHH CS
  Cohesin_HEAT  17 pevldtiarrltDsspsVRdAa 38 
                   ++v  +i++ l+D spsVR Aa
    KHJ33576.1 142 KIVSLAIKKGLSDMSPSVRRAA 163
                   57899****************8 PP

>> HTH_36  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   3.4e-05      0.06       8      42 ..      89     124 ..      86     152 .. 0.87
   2 ?   -0.9   0.0      0.89   1.6e+03      40      51 ..     474     485 ..     469     487 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.4e-05
      HTH_36   8 klllgslasfankngg.cfpsqetlakrlglsknTv 42 
                 kl++++l+s+a ++   +  s  t++k l  +  +v
  KHJ33576.1  89 KLVYIYLLSHAEQEQSlALLSINTIQKSLSDHNPQV 124
                 9**********999999999********98776665 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.89
      HTH_36  40 nTvsraikeLeq 51 
                 +T++r ik L  
  KHJ33576.1 474 KTIIRLIKHLQS 485
                 8*******9976 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.39   7.1e+02      35      50 ..     115     130 ..      96     133 .. 0.78
   2 ?    5.9   0.0     0.011        19       1      51 [.     157     203 ..     157     206 .. 0.81
   3 ?    0.2   0.0      0.64   1.2e+03      25      46 ..     323     343 ..     319     356 .. 0.59
   4 ?   -3.4   0.0       8.9   1.6e+04       9      20 ..     422     433 ..     418     458 .. 0.61
   5 ?   -1.8   0.0       2.8   4.9e+03      28      53 ..     478     500 ..     464     502 .. 0.67

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.39
     HEAT_EZ  35 alLnddsdeVRaaAag 50 
                 + L+d ++ VRa A+ 
  KHJ33576.1 115 KSLSDHNPQVRALALK 130
                 78999999****9986 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.011
     HEAT_EZ   1 wrvRraAawaLGrlaggepellqplvpeilpaLlalLnddsd.eVRaaAaga 51 
                 + vRraAa+a+      + +l++++++e+  +L  lL d ++ +V +aA+ a
  KHJ33576.1 157 PSVRRAAALAI----PKCYRLDPGMLSELQGYLSILLGD-NQyNVAGAAVKA 203
                 68*********....588899999999999999966655.555999999887 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.64
     HEAT_EZ  25 lvpeilpaLlalLnddsdeVRa 46 
                 +++e + aL+alL+ ++ ++++
  KHJ33576.1 323 YIDESIGALMALLRGPQ-DIQQ 343
                 56666666666664332.3333 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 8.9
     HEAT_EZ   9 waLGrlaggepe 20 
                  a+Gr+a+  + 
  KHJ33576.1 422 QAIGRCAQSDSK 433
                 577776655443 PP

  == domain 5  score: -1.8 bits;  conditional E-value: 2.8
     HEAT_EZ  28 eilpaLlalLnddsdeVRaaAagaLg 53 
                 ++++ L    ++++++ Ra  ++  g
  KHJ33576.1 478 RLIKHLQ---STSNPKARASIIWLVG 500
                 4555555...5577788999888776 PP

>> Sec7_N  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1     0.077   1.4e+02      78     135 ..      77     135 ..      52     138 .. 0.80
   2 ?    9.8   0.5   0.00039      0.71      40     114 ..     396     467 ..     356     492 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.077
      Sec7_N  78 sfpvferslrivllLlkkfrseLktEievflsllililles..dsslwqrvlaLeilrrl 135
                 +++v +  ++i  l++ +++s+ ++E +  l  ++ i  +s  d + + r+laL+++ ++
  KHJ33576.1  77 VKNVASPNIEIKKLVYIYLLSHAEQEQSLALLSINTIQ-KSlsDHNPQVRALALKTMSGI 135
                 55666667788889999999999999999998888888.66688899*******999876 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00039
      Sec7_N  40 lesvlsnhgdvfrkhpellqllkqklcplLlknlsespsfpvferslrivllLlkkfrseLktEievflsllili 114
                 ++s++ n  + f ++ ++++l  qk+++++ +++  +++ ++++r+++i+l  +k++ + L++E+ +++++li++
  KHJ33576.1 396 IKSLILNELEHFASNASQIKLA-QKVIQAIGRCA--QSDSKTSSRCMHILLGKMKSVDQDLVEESTIVIRHLIQR 467
                 4566666667787888888865.6999******9..688999****************************99975 PP

>> Carla_C4  Carlavirus putative nucleic acid binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00032      0.57      23      67 ..     134     178 ..     115     182 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00032
    Carla_C4  23 eiavdiikriaakivseGrskYarr.RRArsigRCeRCyRvyPpfv 67 
                  i v +i++i++  +++G s  +   RRA +++  ++CyR+ P++ 
  KHJ33576.1 134 GIRVPVISKIVSLAIKKGLSDMSPSvRRAAALA-IPKCYRLDPGML 178
                 56788999999999******9986527777665.79*******975 PP

>> CNDH2_C  Condensin II complex subunit CAP-H2 or CNDH2, C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  10.5    0.0029       5.1      78     168 ..     719     809 ..     694     810 .] 0.81

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0029
     CNDH2_C  78 lyqkeakerskarrklareeklkqalleeeeaeeeeevdeqeddddneaedgvdddddfgieleeeeddlkeseeeeeeeeeeeltYeeLv 168
                 +++k+ k   +++ + +++++l+ +l eee+++++ e+++ ++ dd  ++++ dd+d++++e+e++e +++e  ++++++ +++++Y+ L 
  KHJ33576.1 719 IHNKQLKSPRENSLNSSKYKTLDSWLAEEEDNNKSLEESDSAEIDDDLESSSNDDEDSSEGEEEDSEASCTEILKHKKNASDDDMEYNLLL 809
                 677888888888888899************9999988888766555555666777799999999999999999999999999999998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (810 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1243  (0.069329); expected 358.6 (0.02)
Passed bias filter:                      573  (0.0319594); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.71u 0.30s 00:00:01.01 Elapsed: 00:00:00.41
# Mc/sec: 5870.70
//
Query:       KHJ33577.1  [L=321]
Description: putative serine threonine-protein phosphatase pp2a catalytic subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-36  127.0   0.4    1.9e-36  126.5   0.4    1.3  1  Metallophos  Calcineurin-like phosphoesterase


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.5   0.4   1.1e-40   1.9e-36       2     201 ..      51     243 ..      50     246 .. 0.89

  Alignments for each domain:
  == domain 1  score: 126.5 bits;  conditional E-value: 1.1e-40
                  EEEEEESBTBTTCCTHHHHHHHHHHHH.HHHTTESEEEEESTSSSSSHHHHHHHHH.HHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddl.lreekpdlvllaGDlvdrgdlekellel.laalvkypipvylllGNHe........gfeeellnkygylg 89 
                  +++v+gD+H     gq++dl+++++    ++  ++l+l  GD+vdrg ++ e++ l ++ +++yp++v+l++GNHe        gf+ e+++kyg+  
   KHJ33577.1  51 PVTVVGDIH-----GQFYDLVEIFKIGgFCPDTNYLFL--GDYVDRGMFSVETISLlVCLKLRYPQRVHLIRGNHEsrgvtqsyGFYTECSRKYGN-- 139
                  799******.....**********7777566699****..*******6666666665**************************************9.. PP

                  HHHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEETHHHHHHHHHHHSCHHHHCC...HHHHHHHHHHTTCSEEEEEESSESS.........CS CS
  Metallophos  90 ifsepwrsdaevfnnlplaslgsgslkvlllhGg.spellvsldklgslnleleapepg...dewlkdlekrekadwvivlgHsply.........rg 174
                    +++w ++++ f++l l++ +++  +++++hGg sp + +s+d+++ +++++e+p++g   d+ ++d     ++           +         rg
   KHJ33577.1 140 --ANVWHYFTDMFDYLTLSVVIND--QIFCVHGGlSPSI-HSIDQVKVIDRFREIPHEGpmaDLVWSD-----PD-----------PerdefslspRG 216
                  ..889*******************..********77777.****************************.....33...........223444444467 PP

                  SSCSCCHHHHHHHHHHTTESEEEEESS CS
  Metallophos 175 sgylfgdealedllkkygvdlvisGHt 201
                  +gy+fg ++++++l  ++  +++++H+
   KHJ33577.1 217 AGYTFGAQVVKKFLTVNNMSHILRAHQ 243
                  99************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2504.66
//
Query:       KHJ33578.1  [L=208]
Description: putative duf323 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-43  147.9   0.4    4.3e-43  147.6   0.4    1.0  1  Methyltransf_33  Histidine-specific methyltransferase, SAM-de
  ------ inclusion threshold ------
       0.14   12.4   0.0       0.23   11.7   0.0    1.4  1  DUF4470          Domain of unknown function (DUF4470)


Domain annotation for each model (and alignments):
>> Methyltransf_33  Histidine-specific methyltransferase, SAM-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.6   0.4   4.8e-47   4.3e-43       2     156 ..      35     190 ..      34     197 .. 0.94

  Alignments for each domain:
  == domain 1  score: 147.6 bits;  conditional E-value: 4.8e-47
  Methyltransf_33   2 aedvlagLss..kpktlpskllYDarGselFeeitelpeYyptrtEiaiLqehaaeiaaai.paatlvelGsGsseKtrlLLealeaaekeltY 92 
                      +e+vl++L+s  +p+tlp+ llY+++G++lFee+t l+eYy+t++Ei+iL e a eia+ i + +++velGsG+++K+ +LL+++e+++k++ Y
       KHJ33578.1  35 KEEVLKSLRStsRPRTLPTMLLYNEQGLQLFEELTYLEEYYLTKAEIDILMESAREIASIItSGSMVVELGSGNLRKVIFLLKEFEKQKKKIDY 128
                      789*****7744779********************************************995566***************************** PP

  Methyltransf_33  93 vplDvseeaLeealealaaeypsleveglvgdyedglewlaslpeaederrlvlflGssigNle 156
                      ++lD+ +++L+++le+    ++ +++ gl+g+yedgl wl s   ++++++++l+lGss+g l+
       KHJ33578.1 129 YALDLCAKELNRTLEQAPP-FRYVSCYGLHGTYEDGLLWLGSAI-NRQRSKVILSLGSSLGTLN 190
                      ****************966.89*******************998.5899************876 PP

>> DUF4470  Domain of unknown function (DUF4470)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.6e-05      0.23      26      67 ..     103     142 ..      65     143 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.6e-05
     DUF4470  26 llgsgDlRhvlktiaslkpssksrklditlndneaeivaRnl 67 
                  lgsg lR+v++ + +   +++++k+d + +d +a+ + R+l
  KHJ33578.1 103 ELGSGNLRKVIFLLKEF--EKQKKKIDYYALDLCAKELNRTL 142
                 47**********99999..67888************999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       673  (0.037537); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 1695.55
//
Query:       KHJ33579.1  [L=303]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       648  (0.0361426); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2246.29
//
Query:       KHJ33580.1  [L=212]
Description: putative extracellular matrix protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-14   54.5   0.7    1.5e-14   54.5   0.7    2.4  2  GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anc


Domain annotation for each model (and alignments):
>> GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.7   8.2e-19   1.5e-14       7      93 .]      29     106 ..      23     106 .. 0.91
   2 ?   -1.8   2.3       0.3   5.4e+03      37      37 ..     164     164 ..     110     195 .. 0.56

  Alignments for each domain:
  == domain 1  score: 54.5 bits;  conditional E-value: 8.2e-19
  GPI-anchored   7 evvtagkpvtitWkdsgtdpgtvtlvLcagssnnlksvktiasgiknsdgsytwtvpaslesggaYflqivsesnegiynySdrFti 93 
                   ++vt gkp+ti+W++    +g+vt++L +g+s+nl +v tiasg+++  +sy w +++s++ +g+Y+++i + +     nyS +F i
    KHJ33580.1  29 ASVTTGKPFTISWAE---ASGPVTILLKSGPSTNLRTVSTIASGQTG--TSYVWIPDSSIP-SGTYAFEIDDANGV---NYSVQFPI 106
                   6899***********...58************************997..5******99998.599*****988885...******87 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.3
  GPI-anchored  37 s 37 
                   s
    KHJ33580.1 164 S 164
                   1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       747  (0.0416643); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1629.62
//
Query:       KHJ33581.1  [L=232]
Description: hypothetical protein EV44_g0303 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       353  (0.0196888); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1661.45
//
Query:       KHJ33582.1  [L=380]
Description: putative nadh oxidase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.4e-93  311.3   0.0    9.8e-93  311.1   0.0    1.0  1  Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase famil
  ------ inclusion threshold ------
      0.049   13.5   0.0       0.11   12.4   0.0    1.6  1  Tautomerase   Tautomerase enzyme


Domain annotation for each model (and alignments):
>> Oxidored_FMN  NADH:flavin oxidoreductase / NADH oxidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  311.1   0.0   1.1e-96   9.8e-93       1     340 [.       5     337 ..       5     339 .. 0.91

  Alignments for each domain:
  == domain 1  score: 311.1 bits;  conditional E-value: 1.1e-96
                   CCCS-EEETTEEESSSEEE----S-TTTTTCS.HHHHHHHHHHHHHHTT-SEEEEEEEESSCCC-SCTTSEE-SSGGGHHHHHHHHHHHHHTT-EEE CS
  Oxidored_FMN   1 kLFkPikignmtLknRivmapmtrlraldkgnvledlaaeyysqraeipvtliiteaafvnpksggfdnapgiwdeeqieewrklteavhengskvv 97 
                   +LFkP++ign +L+nR+vmap+tr ra  k  v+  ++ eyy qr++ p+tl+i+ea+ + p+ gg+dn pgiw+++qi +w+++t+avh+++++++
    KHJ33582.1   5 NLFKPLQIGNLKLQNRLVMAPLTRFRADAKH-VPLPFVSEYYVQRSSSPGTLLISEATIIAPEAGGYDNVPGIWSKDQIDSWKNVTKAVHDKECFIF 100
                   69*************************9999.7778************************************************************* PP

                   EEEE--GGGS..SCSTCEC..SS.ESSSSSTTT-.S...CS-EE--HHHHHHHHHHHHHHHHHHHHTT-SEEEEEE-CTSHHHHHH-TTT----STT CS
  Oxidored_FMN  98 vqlwhlGreakseyladqevdspsdpvaldaqeeesaeevykkeltkeeikqliqefveAAkraieAgfDgVeihganGYLlnqFlspksnkrtDey 194
                   +qlw lGr    e l+++   +  ++   + ++ +s+ +  +  lt+eei+++i  +++AAk+aieAgfDgVeih+a+GYL++qF +  sn+rtD +
    KHJ33582.1 101 LQLWALGRVGSLEVLKKEL--GENAKLVGPSKIGVSGGPS-PTPLTEEEIQNYIGFYAQAAKNAIEAGFDGVEIHAAHGYLIDQFTQEVSNDRTDSW 194
                   **************99999..5555577788888999999.99****************************************************** PP

                   SSSHHHHHHHHHHHHHHHHHHH-SSSEEEEEECE--STTS--HHHH.HHHHHHHCHCCEEEEEEETT-SSSSSTTS-TTTTHHHCCTTHHHHHHCCC CS
  Oxidored_FMN 195 gGslenRarFllevvdaVkeavgeervgyRlSpedvvekgldfaet.aqkivllkelekrlkdgkklalvhaaeprkrgagsvrteqekntefvkev 290
                   gGs+e+Ra+F++ev +aV+ea+g+e++g+R+Sp++ ++ +  + e    + +l++el+k      ++ ++ha+  r+ g   ++    ++++f+ ++
    KHJ33582.1 195 GGSIEKRAKFAIEVTKAVVEAIGAEKTGIRISPFSNFQGMG-VKEPkPLFSYLVQELKKL-----NITYLHAVCSRVSGIIDQEEG--EKLDFLINI 283
                   ************************************98665.555536677777776654.....569999999666655555444..899999999 PP

                   H..SSEEEE-SS--SHHHHHHHHHT..TS-SEEEESTHHHH-TTHHHHHHCCTC CS
  Oxidored_FMN 291 w..kkplitvgriadeekaaeivae..geadLvamgRefladpdlveklkkglp 340
                   w  ++p++ +g+++ ++ ++   +e  +++  v +gR+f+++pdlv+++++g+ 
    KHJ33582.1 284 WgdQNPFLIAGGFTPASAMEASDQEypDKNLAVVFGRYFISNPDLVFRIRHGID 337
                   94357************999999998788899*******************986 PP

>> Tautomerase  Tautomerase enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.3e-05      0.11      11      38 ..     196     223 ..     194     225 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.3e-05
                  S-HHHHHHHHHHHHHHHHHHHTS-GGG- CS
  Tautomerase  11 rsaeqKaeLaervTealvealgaprsai 38 
                  +s e++a++a +vT+a+vea+ga ++ i
   KHJ33582.1 196 GSIEKRAKFAIEVTKAVVEAIGAEKTGI 223
                  5779*******************88755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2912.75
//
Query:       KHJ33583.1  [L=753]
Description: putative oligosaccharyl transferase subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     6e-143  477.3  39.3   1.9e-137  459.2  37.8    2.3  2  STT3      Oligosaccharyl transferase STT3 subunit
  ------ inclusion threshold ------
       0.17   11.4   0.3       0.39   10.1   0.3    1.6  1  Rax2      Cortical protein marker for cell polarity


Domain annotation for each model (and alignments):
>> STT3  Oligosaccharyl transferase STT3 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  459.2  37.8  2.1e-141  1.9e-137       2     488 .]      22     511 ..      21     511 .. 0.92
   2 !   17.3   0.0     2e-07    0.0018     448     485 ..     532     570 ..     518     572 .. 0.93

  Alignments for each domain:
  == domain 1  score: 459.2 bits;  conditional E-value: 2.1e-141
                 HHHHHHHHHCCCCCHCC.CCCCCCT--S--SSCHHHHHHHCCCHHHT-C.....CCHHSSEETTSSTTT-EEESTTCCHCCC.CHHHHHHCCHHC.... CS
        STT3   2 lilvifalialvavasrdlFtdedglsylsefDpYYnyRltenllnnGfpGdvvikkknwfdhsqyyPpGsrvdygplivlLamlasaiinhsld.... 96 
                 l l+i+ l+a +a++sr lF++++++s+++efDp++n+R+t++l++nGf     + +  wfd+++++P+G rv++g+l+++L m++s++i+h+l+    
  KHJ33583.1  22 LRLIILCLVAAAAISSR-LFSVIRFESIIHEFDPWFNFRATKYLVQNGF-----YSFWDWFDDRTWHPLG-RVTGGTLYPGL-MVTSGVIYHALRalti 112
                 45677777777777888.*******************************.....****************.***********.**************** PP

                 .HHHHHHHHCCHHHHHHHHCHHHHHHHHHH.S-CCCHHHHHHHCCC-CCCCCTTSTT--STCCCCHHHHHHHHHHHHHHHHCCSTTCHHHHHHHHHHHH CS
        STT3  97 .vsirevclwlpallgsLlaIpiyflvrel.ksdiaGllAAlllaiaPgYlsrtvaGfyDtdmfeivlllfvlffflkaiktksnkislaviaaliifl 193
                  v+ir++c++l++++++L+a ++y++++e+ k   aGllAA++++iaPgY+sr+vaG+yD+++++i+ll+f++++++ka+k +s  +++ +++al++ +
  KHJ33583.1 113 pVDIRNICVLLAPVFSGLTAYAAYLFTNEIsKTSSAGLLAAIFMGIAPGYISRSVAGSYDNEAIAIFLLIFTFYLWIKALKLGS--VFWGALCALFYGY 209
                 ***************************99835578*************************************************..************* PP

                 HHTTSCCGGHHHHCCHHHHHHHHHCTTTS-CCHHHHHHHHHHHHHHH..CCCCCCCTTCHHHSTTTCHHCCCCHHHHHHHHCCCHHC..CCCCCHHCCC CS
        STT3 194 ivlaWggyailiyallllfilalLiigrfelklkiavtfsviiaflviaiivllflgfqvvavseiigalgifgllqlvafgsvvvlvaelkfyqfisl 292
                 +v+aWggy ++i++l++l++++l+ +grf+ ++++++++++ +++l+  +++++f+gf ++++se+++algifgllql+ f+++ +    + ++qf++l
  KHJ33583.1 210 MVSAWGGY-VFITNLIPLHVFVLICMGRFSPRVYVSYCTWYTLGTLA--SMQIPFVGFLPIRSSEHMSALGIFGLLQLIGFVEFIRD--SVPSKQFSVL 303
                 ********.**************************************..**************************************..********** PP

                 HHTT.HHHHTT--GGGHHHHHHHHHHHHCCCCCCTS-----TTHHHHHHHHHS---S--CCHHHCCSSSTTTTCCCHHHCHHCCHHCTCHHHHHHHHHH CS
        STT3 293 fqpgilsevlgligevvtalavlglialwlgilyslldleyaklkikiiilvsvwlpvgllaltkglrfliftvPlgiifvgllleflavfvkiysvsq 391
                 ++++ +  v  l+   + +l+v+g+ia+w+g++ysl+d+ yak++i+ii++vs+++p+ + a++++l +li+++P+g+++++++l +++vfv  ys+++
  KHJ33583.1 304 LKGF-VILVFLLALACLVLLTVTGVIAPWTGRFYSLWDTGYAKIHIPIIASVSEHQPTAWPAFFFDLNILIWLFPAGVYLCFQKLADEHVFVVVYSILA 401
                 **99.7777777799************************************************************************************ PP

                 HHHCCC-SCHCCCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHHH....HHHHH.........HHHHCT.TTTTHHH....TTHHHCHHHHHHHHHHHHH CS
        STT3 392 ilfsgvvvillmltllpvlallaavkiskifstykdekeakikv....aakav.........aptksnglkeslew....kantnrdsvvitwwdyghi 473
                  +fsgv+v+ lmltl+p ++++aa+++s+i+s+y +    +                     a++ +++  ++l +    +  + ++ +v  ++ ++++
  KHJ33583.1 402 SYFSGVMVR-LMLTLTPIVCISAALAMSNILSVYLAIDLPSTPLdstkT---MesdtslsrtAKVGKQNDIRALRIpfvgIFTSFSKILVAGAMTIYLL 496
                 *********.************************987765555532331...1455566667555556666666544323445668889999******* PP

                 HHHHHHHHHHHHCCS CS
        STT3 474 laveadrpVtfdggs 488
                 l+v++ ++Vt++++s
  KHJ33583.1 497 LFVIHCTWVTSNAYS 511
                 *************98 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 2e-07
                 TTTTHHH.TTHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
        STT3 448 lkeslew.kantnrdsvvitwwdyghilaveadrpVtfd 485
                   e+ +w ++nt++++ +++wwdyg+ +  +adrp+++d
  KHJ33583.1 532 YREAYQWlRQNTPENAKIMSWWDYGYQIGGMADRPTLVD 570
                 67999********************************99 PP

>> Rax2  Cortical protein marker for cell polarity
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.3   4.4e-05      0.39     155     188 ..     298     330 ..     240     341 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 4.4e-05
        Rax2 155 kkkkklsrgfVVlIgLAlALgtvallgllgiila 188
                 k+ + l +gfV+l+ L lAL++ +ll + g+i+ 
  KHJ33583.1 298 KQFSVLLKGFVILVFL-LALACLVLLTVTGVIAP 330
                 67777889******66.**************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (753 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       754  (0.0420548); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 5187.45
//
Query:       KHJ33584.1  [L=695]
Description: putative dynein intermediate chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-07   31.8   5.4      0.011   16.6   0.2    5.2  6  WD40      WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0         1   1.8e+04      13      29 ..      61      69 ..      59      72 .. 0.66
   2 ?   -0.8   0.0      0.19   3.5e+03      29      38 .]     334     345 ..     310     345 .. 0.74
   3 !    5.5   0.0    0.0019        34       5      38 .]     354     388 ..     350     388 .. 0.78
   4 !    7.0   0.4   0.00065        12       6      37 ..     402     436 ..     397     437 .. 0.76
   5 !   16.6   0.2   5.9e-07     0.011       6      38 .]     505     544 ..     501     544 .. 0.89
   6 ?   -2.4   0.0      0.59   1.1e+04      22      36 ..     639     653 ..     630     655 .. 0.77

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 1
                EEEEEEETTSSEEEEEE CS
        WD40 13 vtslafspdgawlasGs 29
                ++s+        l+sG+
  KHJ33584.1 61 ISSI--------LVSGD 69
                6677........88776 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.19
                 ET..TSEEEEEE CS
        WD40  29 sd..DgtvriWd 38 
                 s+  Dg v iW+
  KHJ33584.1 334 SYepDGLVQIWN 345
                 33579******8 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.0019
                 EEEESSSSEEEEEEETTSSEEE.EEETTSEEEEEE CS
        WD40   5 rtltGHssvtslafspdgawla.sGsdDgtvriWd 38 
                 +++ ++s+v    fsp ++ l+  G++ g v +Wd
  KHJ33584.1 354 YVFHAQSDVLTANFSPFHPNLIfGGCYSGQVLLWD 388
                 444445779999999999998746689*******9 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.00065
                 EEESS.SSEEEEE..EETTSSEEEEEETTSEEEEE CS
        WD40   6 tltGH.ssvtsla..fspdgawlasGsdDgtvriW 37 
                 t +GH  +v+s+     ++ + ++s+s Dg v  W
  KHJ33584.1 402 TGSGHtHPVYSINivGTQNANNIISCSTDGVVCGW 436
                 4579955599998887777777899999**99766 PP

  == domain 5  score: 16.6 bits;  conditional E-value: 5.9e-07
                 EEESS.SSEEEEEEETTSSE......EEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgaw......lasGsdDgtvriWd 38 
                 +++GH  +v s++f+p   +      ++s+s D +v++W+
  KHJ33584.1 505 SYRGHaAPVMSVDFHPTRGLvdlgdlVLSSSLDWSVKLWK 544
                 69***999************999997679999*******6 PP

  == domain 6  score: -2.4 bits;  conditional E-value: 0.59
                 SSEEEEEETTSEEEE CS
        WD40  22 gawlasGsdDgtvri 36 
                 g+ +a+G+ D  v i
  KHJ33584.1 639 GKRIATGGIDSCVTI 653
                 566999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (695 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       913  (0.0509231); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 5021.25
//
Query:       KHJ33585.1  [L=255]
Description: putative dna repair protein rad57 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-20   72.8   0.0    5.2e-20   71.8   0.0    1.3  1  Rad51     Rad51


Domain annotation for each model (and alignments):
>> Rad51  Rad51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.8   0.0   2.9e-24   5.2e-20     114     223 ..      15     192 ..       3     206 .. 0.93

  Alignments for each domain:
  == domain 1  score: 71.8 bits;  conditional E-value: 2.9e-24
                 TTHHHHHHH.HTHHHHHHS-EEEEEEETTTGGGCH------.....-THHHHHHHHHHHHHHHHHHHHH--EEEEEEE----................. CS
       Rad51 114 iehqeellq.qaaallaedkfallivDsvtalyRtdfsgrg.....elakRqqklgkllrtLrkladefevavvitnqvvaq................. 189
                  e+q ++l  q++  + +  ++lli+Ds++++yR++f  ++     ++akR   l kl   Lrkla e ++a+v++nqv ++                 
  KHJ33585.1  15 LESQDHILYfQVPVAVRRYGIRLLIIDSIASNYRAEFDRKDqkpsaNMAKRSADLIKLGYFLRKLAVELDIAIVVANQVADRvfenicentstsgalsp 113
                 49******99**************************98776444558**************************************************** PP

                 ................................---.------.............------HHHHHHHH-SEEEEEEE- CS
       Rad51 190 ................................vdgqaalfsa.............dpkkPigGlvlahasttRlalrkg 223
                                                 +d q  +f++             + k P++Gl+++++++ R+al+k+
  KHJ33585.1 114 esprttfcklsdakidvsdfadisqstskqlsLDHQQRWFTGwgdepyptsgvstQLKTPSLGLIWTNQIACRIALIKR 192
                 *****************************************************9999********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 2057.56
//
Query:       KHJ33586.1  [L=137]
Description: putative dna repair protein rad57 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.2e-05   22.0   0.1    9.5e-05   21.8   0.1    1.2  1  Rad51     Rad51
  ------ inclusion threshold ------
       0.15   11.3   0.2       0.24   10.7   0.2    1.2  1  ATPase    KaiC


Domain annotation for each model (and alignments):
>> Rad51  Rad51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.1   1.1e-08   9.5e-05      17      46 ..      94     123 ..      55     135 .. 0.88

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 1.1e-08
                 -EE--S-HHHHHHHTSSEESSSEEEEEEST CS
       Rad51  17 lqlttGskklDelLgGGietgsiteifGef 46 
                  +++t +  lD+ L+GGi+tgsitei Ge 
  KHJ33586.1  94 TKISTLDDGLDNGLRGGIPTGSITEITGER 123
                 469999**********************95 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.2   2.6e-05      0.24       6      27 ..     101     122 ..      93     123 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 2.6e-05
      ATPase   6 eglDeilkgGipegrvvlitGe 27 
                  glD+ l gGip g+++ itGe
  KHJ33586.1 101 DGLDNGLRGGIPTGSITEITGE 122
                 68999999*************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       213  (0.0118802); expected 358.6 (0.02)
Passed bias filter:                      206  (0.0114898); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1110.31
//
Query:       KHJ33587.1  [L=128]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.20s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 1044.22
//
Query:       KHJ33588.1  [L=500]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00045   20.1   0.0     0.0012   18.7   0.0    1.7  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   6.4e-08    0.0012      55     118 ..     363     420 ..     351     421 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 6.4e-08
  Exo_endo_phos_2  55 argeeLiefleehslsllnllksgptfkssngsstiDltltsdnlalskleleeedlgSDHrpi 118
                       +g+e++++ +e+ l +l   +  pt++     +t+Dl +t+ +     + + +e ++SDH+pi
       KHJ33588.1 363 GQGNEIEKWADENRLLCLIIGE--PTHRA---GNTLDLAWTKISEITA-WVDRDECMTSDHLPI 420
                      689*************666644..88855...578********99999.999999*******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       633  (0.0353059); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.18s 00:00:00.72 Elapsed: 00:00:00.35
# Mc/sec: 4274.71
//
Query:       KHJ33589.1  [L=310]
Description: hypothetical protein EV44_g2611 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-80  267.8   8.7    2.9e-57  193.7   3.1    2.1  2  MMU163    Mitochondrial protein up-regulated during meiosis
  ------ inclusion threshold ------
       0.16   12.0   0.2        0.3   11.2   0.2    1.3  1  Tom5      Mitochondrial import receptor subunit or translocas


Domain annotation for each model (and alignments):
>> MMU163  Mitochondrial protein up-regulated during meiosis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.7   3.1   3.2e-61   2.9e-57       7     140 ..      76     210 ..      72     230 .. 0.85
   2 !   78.3   0.6   5.5e-26   4.9e-22     182     248 ..     220     285 ..     207     286 .. 0.82

  Alignments for each domain:
  == domain 1  score: 193.7 bits;  conditional E-value: 3.2e-61
      MMU163   7 ekekdkkppdeRilkLGktlriLserLPtlLvnpLPqeiLsPsitLhLfPsthPhLPtvkGrvaYraalWtaPvaWgsvPlvgnvkLeilserivragt 105
                 e+ k+  + deR++kLGktlr+L+erLPtlL++pLP+++LsP itL+LfPsthPhLP+v+GrvaY+aalWt+P+aWg++Pl++nv+Leilser+++ + 
  KHJ33589.1  76 ESGKNGPKYDERTVKLGKTLRTLQERLPTLLQKPLPSKLLSPRITLNLFPSTHPHLPSVTGRVAYSAALWTSPIAWGRLPLISNVRLEILSERMIKHSH 174
                 455677789****************************************************************************************** PP

      MMU163 106 vleeeekeeedlgdeklvvrWktegkeskkkeeg.....g 140
                 ++ ++++    +  e+lvvrW+t++++++++++      +
  KHJ33589.1 175 LSCPSRS----YRPEQLVVRWRTTSNSHEQNSTAfiynsS 210
                 9999964....589**********8655555554554321 PP

  == domain 2  score: 78.3 bits;  conditional E-value: 5.5e-26
      MMU163 182 svllggdapifklekeeeftGlfifefDeeGRiathtiehadeakgwdrt..akvvtltdWLlgkakgs 248
                   l gg++   + +  ++ftGlfifefDeeGRi+thtieha+e+++w+r   akvv ltdWLlg +kgs
  KHJ33589.1 220 EWLGGGNK---NDDIGKDFTGLFIFEFDEEGRILTHTIEHAQEGGNWERGvgAKVVGLTDWLLGGMKGS 285
                 34444443...567789********************************989*************9986 PP

>> Tom5  Mitochondrial import receptor subunit or translocase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2   3.3e-05       0.3      26      42 ..     135     151 ..     132     152 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.3e-05
        Tom5  26 knfaaaaalLylsPfvi 42 
                 +  +a++a+L+ sP+++
  KHJ33589.1 135 TGRVAYSAALWTSPIAW 151
                 55689***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2370.44
//
Query:       KHJ33590.1  [L=714]
Description: putative glutaminase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-73  244.5   0.0    8.5e-73  243.7   0.0    1.4  1  DUF4965   Domain of unknown function (DUF4965)
    1.7e-65  220.5   4.3    2.2e-65  220.1   1.0    2.8  3  DUF1793   Domain of unknown function (DUF1793)
    1.1e-60  205.2   7.4    1.8e-60  204.6   7.4    1.3  1  DUF5127   Domain of unknown function (DUF5127)
  ------ inclusion threshold ------
      0.046   13.3   2.5       0.59    9.7   2.5    2.4  1  DUF4964   Domain of unknown function (DUF4964)


Domain annotation for each model (and alignments):
>> DUF4965  Domain of unknown function (DUF4965)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  243.7   0.0   1.9e-76   8.5e-73       2     174 .]     355     525 ..     354     525 .. 0.98

  Alignments for each domain:
  == domain 1  score: 243.7 bits;  conditional E-value: 1.9e-76
     DUF4965   2 ggekYadllalsvRqafaalelvskdetsevllflKeissngnvntvDviypalPlflylnpellkllLeplleyqesgkypkkfaahDlGtsYPnatg 100
                 gg++Y+ +++ls+Rqafa++ l +  + ++++lflKeiss+gn++tvDvi+pa+P+flylnpel+kllLepl+e+qe+gkyp+++a+hDlG++YP+  g
  KHJ33590.1 355 GGTDYQIITTLSARQAFASMVLLG--TPENPYLFLKEISSDGNCQTVDVIFPAIPIFLYLNPELVKLLLEPLYEHQEAGKYPNTYAIHDLGAHYPQFIG 451
                 89*********************5..459********************************************************************** PP

     DUF4965 101 qndgedeqmpveesGnmlimalayaqasgdasllekyydllkqWadYLvengldpanqlstddfagalanqtnL 174
                 + +g+de mp+ee+Gnm+im+l+yaq+ +d+++l ++y++lkqW  YL++++l+pa+qlstddf+g+lanqtnL
  KHJ33590.1 452 HPKGDDEGMPLEECGNMIIMTLSYAQRMNDTKYLMDHYPILKQWVGYLIDEALIPADQLSTDDFQGTLANQTNL 525
                 *************************************************************************8 PP

>> DUF1793  Domain of unknown function (DUF1793)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.3      0.49   2.2e+03     100     133 ..     268     301 ..     161     314 .. 0.66
   2 ?   -1.2   0.0      0.55   2.5e+03     127     162 ..     411     446 ..     406     449 .. 0.81
   3 !  220.1   1.0   4.9e-69   2.2e-65       1     166 []     531     700 ..     531     700 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.49
     DUF1793 100 tksdWelfaaavaskktreelissvakwvnetkt 133
                  +s+W +fa a    ++ ++ i++++++v+++++
  KHJ33590.1 268 INSNWPVFAFANNLGSVGKTSITTLYTIVHAQQN 301
                 3566666666665556666666666666666655 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.55
     DUF1793 127 wvnetktdrpftdlYdtegtgglpgfrarpvvGGhF 162
                 ++n +  +  +  lY+ ++ g++p+++a   +G+h+
  KHJ33590.1 411 YLNPELVKLLLEPLYEHQEAGKYPNTYAIHDLGAHY 446
                 66666667778889**999******99999999998 PP

  == domain 3  score: 220.1 bits;  conditional E-value: 4.9e-69
     DUF1793   1 iGikAmseiaellgeeedakkysaiaeeyikkweelai.dg..thlklaYdkedswsllYnlyaDkllglnlvpqsvyemqsafYktvaqkyGlplDsr 96 
                 i+i+Ams i++l+g+e+d +++++ia++yi+kweela+ ++  +h++laY++++s++llYnly D+llglnlvpq+vy+mqs+fY+t aq+yG+ lD+r
  KHJ33590.1 531 IAIEAMSAISDLTGHENDRQNFTNIAHDYISKWEELAVvNSdiPHTNLAYGNDSSYGLLYNLYGDRLLGLNLVPQRVYDMQSKFYPTIAQTYGIQLDTR 629
                 89************************************933469******************************************************* PP

     DUF1793  97 htytksdWelfaaavaskktreelissvakwvnetktdrpftdlYdtegtgglpg..frarpvvGGhFalLa 166
                 ++ tksdW++++aa++s +t++++is++a+wvn+t t+++ftd+Y++ +tg++    f+arpvvGGhFalLa
  KHJ33590.1 630 NLATKSDWQMWVAAISSFSTQRMFISKLANWVNNTVTNTAFTDMYNV-NTGDYWLgpFIARPVVGGHFALLA 700
                 **********************************************9.79999888**************97 PP

>> DUF5127  Domain of unknown function (DUF5127)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.6   7.4   3.9e-64   1.8e-60       1     226 [.     119     349 ..     119     350 .. 0.94

  Alignments for each domain:
  == domain 1  score: 204.6 bits;  conditional E-value: 3.9e-64
     DUF5127   1 tqtiftftaggkveltvtFlSPvlpddldrqSlpfsYltvevkstdgkshsVqvYsdisaewas.gdesqevewstt.tgglayhkvgrqnqevlsek. 96 
                 t+++f ++++gkv ++vtFlSP+ p+d++rqS+  +Yl+v+v+s dg++hsVq+Y disaew+   +++++v+ws++ ++g+a+hkv++qnq++ + + 
  KHJ33590.1 119 TRSTFIMNMDGKVCMNVTFLSPINPSDYKRQSIIGTYLEVTVSSIDGAEHSVQLYADISAEWVNpMNNKTSVKWSYEmENGVASHKVYQQNQSESNADy 217
                 89*************************************************************97788899*****8458****************998 PP

     DUF5127  97 .ndradwGyaylatkakss.ltyqsgedtevrkqFvkngklantkdtnfraisddwpvfalahdlgsvssesksvvfaiGyvrdpaiqylg....qnlr 189
                  +d a wGy+y++t a+ + ++yqsg+d+ vr++F + g+l nt+d  frai+++wpvfa+a +lgsv+++s +++++i +++++ + + g      ++
  KHJ33590.1 218 aDDGAHWGYWYWSTIAS-EsMSYQSGTDDVVRGNFRNYGSLPNTEDYVFRAINSNWPVFAFANNLGSVGKTSITTLYTIVHAQQNGVYFNGrdksAGVP 315
                 9**************55.55************************************************99899*****************9999999** PP

     DUF5127 190 pyWrskyssiedalsaflkdyaaalkrsealDkkira 226
                 ++W+s+++s  +++++f+kd +   ++  +lD+ki++
  KHJ33590.1 316 SFWTSYFESEIKMVDFFIKDRS---TETGSLDHKIST 349
                 *******************976...456677777766 PP

>> DUF4964  Domain of unknown function (DUF4964)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   2.5   0.00013      0.59      17      78 ..      27     103 ..      13     109 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00013
     DUF4964  17 keekkseLRaPayPLvtidpylsiW....sftdeLndesvkhwtgkd...........lpllgvlrVDGkvYrfmGk 78 
                 +++k s  R Pa+PL +  py++ W    +   +L  +   +wtg+            ++  g+++VD  v+ +mG+
  KHJ33590.1  27 TASKFSPARPPAIPLAVRSPYMNTWlnvgANGGNLSGSWPYFWTGSPagatrgtnnavTAWTGLIKVDNVVFTWMGS 103
                 56666778*****************4444455688888888888754111111111223567888888888888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (714 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 5083.84
//
Query:       KHJ33591.1  [L=366]
Description: putative 2-nitropropane dioxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-59  202.5   0.5    1.5e-59  202.1   0.5    1.2  1  NMO           Nitronate monooxygenase
    3.3e-11   42.8   0.2    2.9e-09   36.4   0.2    2.3  1  IMPDH         IMP dehydrogenase / GMP reductase domain
    2.6e-08   33.3   1.1      4e-08   32.7   1.1    1.2  1  FMN_dh        FMN-dependent dehydrogenase
    0.00021   20.5   0.3    0.00039   19.7   0.3    1.4  1  Glu_synthase  Conserved region in glutamate synthase
    0.00024   20.4   0.2    0.00034   19.9   0.2    1.2  1  DHO_dh        Dihydroorotate dehydrogenase
  ------ inclusion threshold ------
       0.11   11.7   0.0       0.23   10.6   0.0    1.5  1  NanE          Putative N-acetylmannosamine-6-phosphate epimer


Domain annotation for each model (and alignments):
>> NMO  Nitronate monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  202.1   0.5   5.1e-63   1.5e-59       2     331 .]      20     351 ..      19     351 .. 0.92

  Alignments for each domain:
  == domain 1  score: 202.1 bits;  conditional E-value: 5.1e-63
         NMO   2 slltellkikppvvqpgmggiskarLaaavsnaGgLGvlasgyltaDrlakeirkvka.ltdk..Pfgvnlflpkkdaadraekykkeleeaalelnie 97 
                 ++ t+llki++p+  +gm + +++rLaaav naGgLGvl++   t+  l+++i+++k  l+dk  Pfgv l+lp+     r             ++   
  KHJ33591.1  20 TPATDLLKINHPILLAGMNVAAGPRLAAAVTNAGGLGVLGGIGYTPQMLRDQINELKIfLIDKsaPFGVDLLLPQVGGSAR-----------KTNYDYT 107
                 6789************************************8889***********9964788889*********9888877...........3566666 PP

         NMO  98 egvrfyrkvevvldekvevvsfgfglpteevvarlkeagvvliptissvkearkvearGaDalivqGpeaGGhqGtpevgdkglfaLvpqvldavd... 193
                 +g   ++ + ++ + ++++   ++g+p+++vv+rl++ag++ + +i+  k++ k  ++G D++ +qG+e+GGh+G+ +     ++ L+p v++  +   
  KHJ33591.1 108 KGKL-DELITIIIESGAKLFVSAVGVPPQHVVDRLHAAGILYMNMIGHPKHVNKCLNLGVDIICAQGGEGGGHTGDIP-----TTVLIPAVVKLCKdkf 200
                 6766.67778888889999999*****************************************************554.....5788888888888888 PP

         NMO 194 .......iPviAaGGiidrrgvaaaLalGAsgvqigtrfLltkesdakdahkkklleaklddteltsavsGrpaRalatelleeleeakiatlalpeah 285
                        + viAaGGi +++ vaaaL lGAs+v +gtrf+lt+e++a++ah++++  +++dd + t  + Grp R+  +  ++  ee+++a ++  +++
  KHJ33591.1 201 spmsrkpVQVIAAGGIYNGQTVAAALMLGASAVWVGTRFILTDEAGASKAHQEAVRTSGFDDNVRTIIFTGRPLRVRTNAYIQDWEENRTAEIKELTKK 299
                 8*************************************************************************************9999999888777 PP

         NMO 286 ......elakkiraalveagnteegl.lwagqgidrldkiisvkeLiesLvee 331
                       ++  ++ + + e  + +++  +  g+++ ++d+  s+k+L+ +Lv++
  KHJ33591.1 300 giipveHEMENLPDDVDEE-KLDQMRpFLMGKAAAVVDEKKSAKDLVDELVND 351
                 8999999999999998888.99998636789*******************975 PP

>> IMPDH  IMP dehydrogenase / GMP reductase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.2   9.9e-13   2.9e-09      20     251 ..      15     251 ..       6     260 .. 0.78

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 9.9e-13
                 GSB--EESSTTEEESSSEEE-SSTTT-SHHHHHHHHHTTSEEEE-SS.S-HHHHHHHHHHHHTSTTSXBXTTSXB-EEEEE-..SSTTHHHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxx RF
       IMPDH  20 evdlktkltkkiklniPlvsaamdtvtesemAialareGgigvihkn.lsieeqaeevkkvkrspnaakdekgrllvgaavg..vkedalervkalvea 115
                   +l+t  t+ +k+n P++ a m+  ++ ++A a++++Gg+gv+     +++   ++++++k +   +    g  l    vg  +++ + +  k  +++
  KHJ33591.1  15 PQKLRTPATDLLKINHPILLAGMNVAAGPRLAAAVTNAGGLGVLGGIgYTPQMLRDQINELKIFLIDKSAPFGVDLLLPQVGgsARKTNYDYTKGKLDE 113
                 568999**************************************8864778888899999997755544444433333333301333344444555555 PP

                 T-SEEEEE-STSSSHHHHHHHHHHHHHTTTSEEEEEE.E-SHHHHHHHHHTT-SEEEE-SS-STTBHHHHHCSB---HHHHHHH.HHHHHCTCT-EEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx RF
       IMPDH 116 gvdvlvvdsahghsekvleavkeikkkveeveviaGn.vataegakaLieagadavkvGiGpGsiCttrvvagvGvpqltAvae.vaeaakkagvpvia 212
                  + +++   a+   + v    +++ ++++   ++  n +   + +++ ++ g+d++    G G   t  + + v +p +  +++   + ++++ v+via
  KHJ33591.1 114 LITIIIESGAKLFVSAVGVPPQHVVDRLHAAGILYMNmIGHPKHVNKCLNLGVDIICAQGGEGGGHTGDIPTTVLIPAVVKLCKdKFSPMSRKPVQVIA 212
                 56666666667666777666677777776666665552778899**************99****9************98887651456788889***** PP

                 ES---SHHHHHHHHHTT-SEEEESCCCTTBTTSSSEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       IMPDH 213 DGGikysgdivkAlaaGadavmlGsllagteEspgevil 251
                  GGi + + ++ Al +Ga+av +G  +  t+E+ +++  
  KHJ33591.1 213 AGGIYNGQTVAAALMLGASAVWVGTRFILTDEAGASKAH 251
                 ********************************9887655 PP

>> FMN_dh  FMN-dependent dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   1.1   1.3e-11     4e-08     224     317 ..     152     253 ..     141     266 .. 0.83

  Alignments for each domain:
  == domain 1  score: 32.7 bits;  conditional E-value: 1.3e-11
                 E-SHHHHHHHHHTTESEEEE--GGGTSSTT---HHHCHHHHHHHH..........SS-EEEESS--SHHHHHHHHHTT-SEEEESHHHHHHHHHHHHHH CS
      FMN_dh 224 vltaedakraveaGvdgivvSNHGGRqldgapatidvLpeiveavgg........rievlvDgGirrGsDvlkAlalGAdavllGRpflyglaagGeeG 314
                 + +++ +++++++Gvd+i      G    g ++t   +p++v+ +++         ++v++ gGi +G+ v+ Al lGA+av++G  f+    ag  + 
  KHJ33591.1 152 IGHPKHVNKCLNLGVDIICAQGGEGGGHTGDIPTTVLIPAVVKLCKDkfspmsrkPVQVIAAGGIYNGQTVAAALMLGASAVWVGTRFILTDEAGASKA 250
                 6789999**********999776666667778888899*****9975566666547*****************************99988766665555 PP

                 HHH CS
      FMN_dh 315 ver 317
                  ++
  KHJ33591.1 251 HQE 253
                 555 PP

>> Glu_synthase  Conserved region in glutamate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.3   1.3e-07   0.00039     251     307 ..     180     240 ..     152     250 .. 0.74

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 1.3e-07
                   B-.--HHHHHHHHHHHHHHT...T-GGG-EEEEESS--SHHHHHHHHHHT-SEEE-SHHHH CS
  Glu_synthase 251 aG.lPlelalaevdqtlkee...glrdrvsliadGglktgadvvkalalGAdavgigtaal 307
                   +G +P+ + +++v++  k++     r+ v++ia+Gg+  g+ v+ al+lGA av +gt  +
    KHJ33591.1 180 TGdIPTTVLIPAVVKLCKDKfspMSRKPVQVIAAGGIYNGQTVAAALMLGASAVWVGTRFI 240
                   333566666666666555442225799******************************9765 PP

>> DHO_dh  Dihydroorotate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.2   1.1e-07   0.00034     237     290 ..     200     253 ..     143     257 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 1.1e-07
                 HHHHTTT.S-EEEESS--SHHHHHHHHHHTECEEEESHHHHHHGTCHHHHHHHH CS
      DHO_dh 237 lykrlkkeipiIgvGGiesgeDalekieaGAslvqvytalvfegpkiakkikke 290
                 ++ + +k +++I+ GGi  g+ +   ++ GAs+v v+t ++ ++ + a+k ++e
  KHJ33591.1 200 FSPMSRKPVQVIAAGGIYNGQTVAAALMLGASAVWVGTRFILTDEAGASKAHQE 253
                 55677889*********************************9999998888876 PP

>> NanE  Putative N-acetylmannosamine-6-phosphate epimerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   7.7e-05      0.23      82     175 ..     135     238 ..     126     256 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 7.7e-05
                 HHHHHHHHHH--EEEEE-SSHHHHHHHHHTT-SEE...E-TTTTSSTTS-....SS--HHHHHH....HHHTT--EEEES---SHHHHHHHHTT--SEE CS
        NanE  82 eelikkikekyqllmaDistleeglvakklGvdiv...GttlsGytkeeek...aepDfalvka....lseaglkviaeGrintPekakkaieiGvdav 170
                 ++++ +++  + l m  i        + +lGvdi+   G    G+t++          ++l k+    +s + ++via G i   +  + a+ +G+ av
  KHJ33591.1 135 QHVVDRLHAAGILYMNMIGHPKHVNKCLNLGVDIIcaqGGEGGGHTGDIPTtvlIPAVVKLCKDkfspMSRKPVQVIAAGGIYNGQTVAAALMLGASAV 233
                 5789999****************************4444455677777766332223345555433334556677****999999999999******** PP

                 EE-HH CS
        NanE 171 vvGsa 175
                  vG+ 
  KHJ33591.1 234 WVGTR 238
                 **974 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       473  (0.0263818); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2546.39
//
Query:       KHJ33592.1  [L=86]
Description: putative nonribosomal peptide synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       240  (0.0133861); expected 358.6 (0.02)
Passed bias filter:                      215  (0.0119917); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 674.07
//
Query:       KHJ33593.1  [L=189]
Description: hypothetical protein EV44_g3825 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       723  (0.0403257); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.21s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1505.84
//
Query:       KHJ33594.1  [L=413]
Description: putative ph domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-21   76.8   5.6    1.3e-12   48.1   0.8    2.6  3  PH        PH domain
    1.4e-08   35.1   1.7    7.7e-05   23.0   1.2    3.2  2  PH_9      Pleckstrin homology domain
    9.5e-06   25.8   0.5    2.5e-05   24.5   0.5    1.7  1  PH_8      Pleckstrin homology domain
    2.1e-05   24.9   5.8       0.04   14.3   1.9    3.7  2  PH_11     Pleckstrin homology domain
  ------ inclusion threshold ------
      0.053   13.3   0.1       0.12   12.2   0.1    1.5  1  PH_13     Pleckstrin homology domain
       0.08   12.6   0.1       0.17   11.5   0.1    1.5  1  ComK      ComK protein


Domain annotation for each model (and alignments):
>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.1   0.8   4.4e-16   1.3e-12       1     103 [.      68     162 ..      68     164 .. 0.94
   2 ?   -2.8   0.0       3.1   9.3e+03      39      60 ..     190     211 ..     169     228 .. 0.62
   3 !   30.8   0.1   1.1e-10   3.2e-07       4      99 ..     309     398 ..     306     404 .. 0.80

  Alignments for each domain:
  == domain 1  score: 48.1 bits;  conditional E-value: 4.4e-16
                 EEEEEEEEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHH CS
          PH   1 vvkeGwLlkkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWika 99 
                 v+k+G ++k++ + k  wk  ++vL+  +l++ykn+   ++ +++++i+ls+++ v   ++++ kr + f l  +    sr+y+lqa s  + keW+  
  KHJ33594.1  68 VIKSGLVQKRTRKTK-AWKSIFLVLRPYSLSIYKNQ---REDKLRHKIHLSDLTAVTLLKDPKNKRQHIFGLFSP----SRNYHLQAQSWADVKEWVDL 158
                 6899*********99.********************...*****************999788**********555....69*****************9 PP

                 HHHH CS
          PH 100 iqsa 103
                 i++ 
  KHJ33594.1 159 IRKE 162
                 9986 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 3.1
                 TTESSEEEEEESTTEEEEEEEC CS
          PH  39 ekdkepkgsislsncevvevva 60 
                   dk+++++i+++   + +++ 
  KHJ33594.1 190 VIDKTMRNKIEIRRSIDGRRES 211
                 4567777777777777666654 PP

  == domain 3  score: 30.8 bits;  conditional E-value: 1.1e-10
                 EEEEE..EETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHH CS
          PH   4 eGwLl..kkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWika 99 
                 +G+Ll  + ++g + +wk +w+v++ +++  yk++   +++ p  +i+ls++    + ++ +++++ c++++++    ++++ ++a se+ + + + a
  KHJ33594.1 309 QGYLLwlRSRGGVR-QWKNMWVVIRCKSITCYKDE---SEYLPSIIIPLSSIINAVEIDPMSKTKNLCLQIITD----EKSFRFCAQSEDILDKSLGA 398
                 67844445555555.**********999*******...*************9998655355999999****888....59********9977665555 PP

>> PH_9  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   1.2   2.6e-08   7.7e-05      17     114 ..      75     159 ..      67     160 .. 0.81
   2 !    7.2   0.0    0.0021       6.2      22      51 ..     320     349 ..     315     387 .. 0.81

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 2.6e-08
        PH_9  17 kktplkkrgWkevyavlkklvLylykdeeesesaetedlkslknakllgkirlhhaLaekasdYkkkshvFrLqtadgaeylfqtsdakevqeWvdti 114
                 +k  +k + Wk++++vl+   L +yk+++e +  +   l++l  +          +L + ++  +k++h+F L   + ++y +q+++  +v+eWvd i
  KHJ33594.1  75 QKRTRKTKAWKSIFLVLRPYSLSIYKNQREDKLRHKIHLSDLTAV----------TLLKDPK--NKRQHIFGLFSPS-RNYHLQAQSWADVKEWVDLI 159
                 4455999********************888777777765554444..........5555554..79*******9776.689**************976 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0021
        PH_9  22 kkrgWkevyavlkklvLylykdeeesesae 51 
                 + r+Wk++++v++ + ++ ykde+e  ++ 
  KHJ33594.1 320 GVRQWKNMWVVIRCKSITCYKDESEYLPSI 349
                 679*******************99665554 PP

>> PH_8  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5   0.5   8.3e-09   2.5e-05       3      87 ..      73     161 ..      71     163 .. 0.80

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 8.3e-09
        PH_8   3 llkkrrkklqgyakRfFvLdlksstlsYyrddnssalrgkiplsla.iisa.....neekreiiidsGaevWeLkasnekdfqeWvealek 87 
                 l++kr +k++ ++  f vL  +  +ls y+++ + +lr+ki ls   ++       n++++ + + s  + ++L+a++ +d++eWv+ + k
  KHJ33594.1  73 LVQKRTRKTKAWKSIFLVL--RPYSLSIYKNQREDKLRHKIHLSDLtAVTLlkdpkNKRQHIFGLFSPSRNYHLQAQSWADVKEWVDLIRK 161
                 6788888999*99999999..9999*****************986535543232224444455689********************98876 PP

>> PH_11  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   1.9   1.3e-05      0.04       3      47 ..      72     117 ..      70     162 .. 0.60
   2 !    7.8   0.1    0.0014       4.3       3      50 ..     310     360 ..     308     401 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.3e-05
       PH_11   3 Gylkkkgsk..aWkrrwfavlkdgvLeyYksekkkvvkhviklSngs 47 
                 G ++k+  k  aWk  ++ vl++  L+ Yk++ +  ++h i+lS   
  KHJ33594.1  72 GLVQKRTRKtkAWKSIFL-VLRPYSLSIYKNQREDKLRHKIHLSDLT 117
                 55555555566*******.***********99888867766666433 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0014
       PH_11   3 Gylkkkgsk....aWkrrwfavlkdgvLeyYksekkkvvkhviklSngseak 50 
                 Gyl   +s+     Wk+ w+ v++   +  Yk+e +   + +i lS  ++a+
  KHJ33594.1 310 GYLLWLRSRggvrQWKNMWV-VIRCKSITCYKDESEYLPSIIIPLSSIINAV 360
                 77766677777779******.9999*********999988888888877664 PP

>> PH_13  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1     4e-05      0.12      79     134 ..     108     164 ..      92     175 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4e-05
                 SS-EETTSEE.EE--SSS-.----EEEEEESSEEEEEEESSHHHHHHHHHHHHHHHH CS
       PH_13  79 kkpiflnevl.vkkpsdksdssekvlklsdidkvitlkaesanersaWvkkikeAse 134
                 ++ i l++++ v   +d++++ ++++ l   ++ ++l+a+s  + ++Wv  i++ s+
  KHJ33594.1 108 RHKIHLSDLTaVTLLKDPKNKRQHIFGLFSPSRNYHLQAQSWADVKEWVDLIRKESR 164
                 56677777752677999**9******************************9988765 PP

>> ComK  ComK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   5.8e-05      0.17      13      63 ..     362     411 ..     357     412 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 5.8e-05
        ComK  13 ilpkydekkklvskvieeedeflvkqkplqiiekScryygssyegrkegtk 63 
                 i p+ ++ k+l+ ++i +e++f  + ++ +i++kS+  + s +++r+e+t 
  KHJ33594.1 362 IDPM-SKTKNLCLQIITDEKSFRFCAQSEDILDKSLGAIKSLIAQRRETTI 411
                 6677.788899************************************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3058.84
//
Query:       KHJ33595.1  [L=323]
Description: hypothetical protein EV44_g1740 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       706  (0.0393775); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2330.06
//
Query:       KHJ33596.1  [L=191]
Description: putative fungal protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0011   19.2   0.0     0.0017   18.6   0.0    1.3  1  UAF_Rrn10  UAF complex subunit Rrn10


Domain annotation for each model (and alignments):
>> UAF_Rrn10  UAF complex subunit Rrn10
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   9.2e-08    0.0017      65     112 ..      99     149 ..      74     157 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 9.2e-08
   UAF_Rrn10  65 dldlrvvqdyatelll....akykkliealdesslltlGllvekwvkdyltd 112
                 dl l++++ y++++      + +    ++ld ++l++lG+l e+ vkd++ +
  KHJ33596.1  99 DL-LKALHTYTSDFYSkttsNSGISDWKSLDGTALIALGILTEELVKDMIGE 149
                 45.6778887777655101144555689*********************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       610  (0.0340231); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1450.20
//
Query:       KHJ33597.1  [L=1003]
Description: putative glycosyl hydrolase family 65 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.2e-23   81.3   2.2    1.5e-18   66.8   0.1    2.2  2  Glyco_hydro_65m  Glycosyl hydrolase family 65 central catalyt
      6e-18   65.3   0.0    1.1e-17   64.5   0.0    1.4  1  Glyco_hydro_65N  Glycosyl hydrolase family 65, N-terminal dom
    6.5e-05   23.1   0.1    0.00031   20.9   0.1    2.2  1  F5_F8_type_C     F5/8 type C domain


Domain annotation for each model (and alignments):
>> Glyco_hydro_65m  Glycosyl hydrolase family 65 central catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.8   0.1   2.5e-22   1.5e-18      17     202 ..     409     590 ..     394     609 .. 0.81
   2 !   14.4   0.3   2.1e-06     0.013     265     328 ..     613     678 ..     592     698 .. 0.72

  Alignments for each domain:
  == domain 1  score: 66.8 bits;  conditional E-value: 2.5e-22
  Glyco_hydro_65m  17 rld...vgakGltGegYrGhvfWDtElfvlPlylltepevarnlLeyRynrleaArekAkekglk.G.AlyPwesasdGeEesqelhlnirsge 105
                      +l+   v+  Glt + Y+G+ fWD+ +++ P  ++t p+ a ++ +   +++++A e+Ak+ g   G AlyPw s++ G  ++        +g 
       KHJ33597.1 409 NLNddsVSVCGLTSDCYGGQNFWDAPTWMAPGISVTFPNYAEQINNLYKKQFPQALENAKAYGYPkGsALYPWTSGRYG-NCT-------ATGP 494
                      3434559999*****************************************************855549********99.666.......4555 PP

  Glyco_hydro_65m 106 wepdaseeeiHvnaaiayavvqYveatgDe.efle..eeglellvetarfWasraeldkdkgryeidgviGPdEYeenvdnNaytnliaawnle 196
                            + e+H n++ia  + q  ++tg + +f e  + +++++  +a    ++ +++++   + i +++ PdEY+++v+n a+t    a++l+
       KHJ33597.1 495 CV----DYEYHKNLDIALSLCQLKKITGNStQFWEgpKSAAKIVDSIATSMSHLLSYNHTTKSFWIYNMTDPDEYSNHVNNGAFTLAATAKVLS 584
                      44....89*******************98625554324566666678999999999999999***********************999999988 PP

  Glyco_hydro_65m 197 laleal 202
                      la +  
       KHJ33597.1 585 LANSLR 590
                      875443 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 2.1e-06
  Glyco_hydro_65m 265 tdlllkaegdkvlesqviKQaDvllllyl.lkeefseeqikanldfYepr.tvhdSslSalvhaiv 328
                       + + + e++++++s v+KQaDv+l  y+ ++ ++  +     l++Y  +   ++ ++  +++a +
       KHJ33597.1 613 SESNITLEYERMNNSVVVKQADVILIRYInYDTNYPVSRQVLDLNYYALKqFPNGPAMTYSIFASL 678
                      46678899********************97777888888888889996440345555555565555 PP

>> Glyco_hydro_65N  Glycosyl hydrolase family 65, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.5   0.0   1.8e-21   1.1e-17      19     227 ..      53     322 ..      41     323 .. 0.78

  Alignments for each domain:
  == domain 1  score: 64.5 bits;  conditional E-value: 1.8e-21
                      EE-SSEEE----TT....TT--........................-EEETT-EE-T........TSSS-E.....E----EEEEEEEEETTEE CS
  Glyco_hydro_65N  19 lGNGylGtRgafee....eysdp.......................gtyiaGvYdreiseeanGypeenee.....lvnlpdwlglrlrvdgee 80 
                      ++NGy G   a+ +    e   +                       +++++G+ d ++   ++++pe  ++     +  +p+ + + l++ g+e
       KHJ33597.1  53 VANGYVGAAMAAIGplfgE---GtyqtnhtkqkslntwplynpkitFATVSGFLDVQENATGYNFPELSRDgwdsfISGIPHPTSIILSFFGHE 143
                      89************44331...133455666778888899999999*********995555666666544322222899***********9999 PP

                      --GGGS..EEEEEEEEEETTTTEEEEEEEEE-TTS...-EEEEEEEEEE-SSSTTEEEEEEEEEESS--EEEEEEEEEETT--B.......... CS
  Glyco_hydro_65N  81 ldldeg..eildyereLdlreGvltrsltwrspag...kevrveserfvsladrhlaairlevtplnfsgevevesgldgdvan....ekh... 162
                      l+ +    ei+++ +++++r+Gv ++++tw+++      ++++ ++ + ++  ++l a++ +vt+ + + + +v++ ldg+ +     +     
       KHJ33597.1 144 LNDSVSitEISNFMSSINMRDGVNKWQFTWTPTVNsdkISFDIIYKVISHRVIPNLWAVEAQVTASD-DINGTVTDLLDGRSSLrsylN-Vkgm 235
                      65433344***********************7655555899************************85.88**************66551.1454 PP

                      ..........EEEEETTSS-EEEEEEEEEEEETTEE--SEE....................SEEEEEEEEEE-TT-EEEEEEEEEEEET CS
  Glyco_hydro_65N 163 kdprka....levrtresgitvavaartrveasgeklevee....................ekiaqtlsvelkagetvtleKyvavats 227
                      ++++++    ++++++++g++ ++a  ++ +  ++k +  +                    ++i+qt++v lk++e+ +++K+v++a++
       KHJ33597.1 236 DKSEDNnfhtIYSSVHPDGLENVTAWLVSGADFSNKYT--DlnsrrlaahgllhletervdSTIGQTFDVYLKKNEPAVFHKFVTIAST 322
                      3333336888*********7766655554444444333..13467788999***********************************997 PP

>> F5_F8_type_C  F5/8 type C domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.1   5.2e-08   0.00031      10      83 ..     863     938 ..     852     998 .. 0.71

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 5.2e-08
                   TTTGGGGGGSSSTTSSEEESSSSTT.EEEEEEEEEEEEEEEEEEEECSSTTSSEEEEEEEEEESSSSSEEEEEE......E CS
  F5_F8_type_C  10 gewpaaaaldGnkntaWsssssddk.qwlqvdLgkpkkidgvvtqgrqdggnayvksykiqvsddgetWttvkd......e 83 
                   ++  + aa+dG+++t+W +++++    ++  +  +p+ i+++++++     +  +k++ ++ s+   +W++  +      +
    KHJ33597.1 863 SGEFPLAAVDGSTATFWQPQKDNTAfLYINTKVITPTSIKKFIFYWG----SRHPKAVAVYASNMT-DWRDQEGyvmigqD 938
                   334689************7777765588888899*************....99**********996.89876665445541 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1003 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.69u 0.27s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 6924.27
//
Query:       KHJ33598.1  [L=141]
Description: hypothetical protein EV44_g3249 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0003   20.5   1.4    0.00046   19.9   1.4    1.3  1  zf-C2H2_10  C2H2 zinc-finger
  ------ inclusion threshold ------
      0.077   13.9   0.1       0.12   13.3   0.1    1.3  1  AIM3        Altered inheritance of mitochondria protein 3


Domain annotation for each model (and alignments):
>> zf-C2H2_10  C2H2 zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   1.4   5.1e-08   0.00046       4      20 ..      17      33 ..      15      36 .. 0.90

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 5.1e-08
  zf-C2H2_10  4 itCSYChetGHtRAkCe 20
                + C YC++ GH R +C+
  KHJ33598.1 17 KSCAYCKKRGHLRERCF 33
                68**************7 PP

>> AIM3  Altered inheritance of mitochondria protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   1.4e-05      0.12      17      61 ..      40      85 ..      37      95 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.4e-05
        AIM3 17 kGtksvaKsGyqagKkhykkskekreerdgk.ddsdeereededyd 61
                +Gtk  aK  y+a K +    k  r +r++  ++s+   + d d+d
  KHJ33598.1 40 DGTKWAAKNPYEADKIRKFRDKLARRKRKERsESSQLTTRPDTDTD 85
                7**************8877777666666443122222222233333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       727  (0.0405488); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1050.19
//
Query:       KHJ33599.1  [L=109]
Description: putative thioredoxin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.1e-27   94.6   0.1    3.7e-27   94.3   0.1    1.0  1  Thioredoxin    Thioredoxin
    7.5e-07   29.6   0.1    5.8e-06   26.7   0.1    1.9  1  Thioredoxin_2  Thioredoxin-like domain
      8e-07   28.9   0.0    9.2e-07   28.7   0.0    1.1  1  Thioredoxin_9  Thioredoxin
    0.00068   19.9   0.0       0.12   12.7   0.0    2.2  2  Thioredoxin_8  Thioredoxin-like
     0.0012   18.2   0.1     0.0013   18.1   0.1    1.1  1  OST3_OST6      OST3 / OST6 family, transporter family
     0.0026   17.5   0.1      0.042   13.6   0.1    2.0  2  Redoxin        Redoxin
  ------ inclusion threshold ------
      0.026   14.7   0.0      0.034   14.3   0.0    1.3  1  Thioredoxin_7  Thioredoxin-like
       0.05   13.6   0.0      0.083   12.9   0.0    1.3  1  HyaE           Hydrogenase-1 expression protein HyaE


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.3   0.1   1.6e-30   3.7e-27       5     102 ..       7     101 ..       3     102 .. 0.96

  Alignments for each domain:
  == domain 1  score: 94.3 bits;  conditional E-value: 1.6e-30
                  SSHHHHHHHHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEESS-HHHHHHHHHH CS
  Thioredoxin   5 ltkenFeeevakekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkkyegarekeklaaflk 102
                   ++++F++ +++ +k v+v+ yA+wCg+C+ + P++ek++e++  ++ +ak d+de ++l ++++++++Pt+ +f++g++ ++++ga++ +kl++++k
   KHJ33599.1   7 KSQAEFDAMIKA-HKYVVVDSYATWCGPCRVIGPVFEKFSENYP-QIYFAKFDTDEVQSLSEHLKIRAMPTFTFFHDGNKLDQVTGASP-DKLENTIK 101
                  56889******9.*******************************.********************************************.****9997 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.1   2.6e-09   5.8e-06       3     105 ..      17      96 ..      15     100 .. 0.80

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 2.6e-09
  Thioredoxin_2   3 gngkpvlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPt.ivfldgkeivarlp 97 
                    + +k+v+v+ ++++C+ C+ +  ++++             ++++ ++++a   ++e++           l++ +++r++Pt ++f dg+ ++++++
     KHJ33599.1  17 KAHKYVVVDSYATWCGPCRVIGPVFEKF------------SENYPQIYFAKFDTDEVQ----------SLSEHLKIRAMPTfTFFHDGN-KLDQVT 89 
                    679*****************99988887............566555555555555554..........899**********77799999.99**** PP

  Thioredoxin_2  98 Gyvpaeel 105
                    G+  +++l
     KHJ33599.1  90 GAS-PDKL 96 
                    *96.5555 PP

>> Thioredoxin_9  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   4.1e-10   9.2e-07      49     123 ..      27      98 ..       2     103 .. 0.82

  Alignments for each domain:
  == domain 1  score: 28.7 bits;  conditional E-value: 4.1e-10
                    --TT-HHHHHHHHHHHHHHHH-TTEEEEEE-HHHHHHHTTTTTT-SS--SSEEEEE-TT--EEEEEESS-HHHHH CS
  Thioredoxin_9  49 tedwCgDaavnvPvlakiaelnpnievkillrdenlelmdqyltngaraiPtliildeegeelgvwgerPaevqe 123
                     + wCg ++v+ Pv++k++e+ p+i +  +  de + l +  +    ra Pt+ ++ ++ +  +v g  P ++++
     KHJ33599.1  27 YATWCGPCRVIGPVFEKFSENYPQIYFAKFDTDEVQSLSEHLKI---RAMPTFTFFHDGNKLDQVTGASPDKLEN 98 
                    478*************************************9865...*********9988877888888888776 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   5.3e-05      0.12       2      31 ..      20      49 ..      19      53 .. 0.93
   2 !    8.2   0.0    0.0014         3      52      88 ..      43      78 ..      40      85 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 5.3e-05
                   SEEEEEE--SSSHHHHHHHHHHHHHHHHHH CS
  Thioredoxin_8  2 kvvlLyfgaswcppckaftpklkelyeklk 31
                   k+v++  +a+wc pc+ + p   +++e++ 
     KHJ33599.1 20 KYVVVDSYATWCGPCRVIGPVFEKFSENYP 49
                   8************************99986 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0014
                   HHGGGS-TTSEE.EE-TT-HHHHTT-S--TT-SEEEE CS
  Thioredoxin_8 52 kylkknkkpwlsvpfddkkrnklkkkynvkaiPtlvv 88
                   k+ ++  ++ ++  fd ++ + l +++++ a+Pt+  
     KHJ33599.1 43 KFSENY-PQIYFAKFDTDEVQSLSEHLKIRAMPTFTF 78
                   444444.889999*********************865 PP

>> OST3_OST6  OST3 / OST6 family, transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.1     6e-07    0.0013      46     107 ..      31      84 ..      10     104 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 6e-07
   OST3_OST6  46 CelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlllfppkkg 107
                 C +Cr + p fe+ ++ + +        ++Fak d de +++ ++l+++  P + +f+  ++
  KHJ33599.1  31 CGPCRVIGPVFEKFSENYPQ--------IYFAKFDTDEVQSLSEHLKIRAMPTFTFFHDGNK 84 
                 99999999999998887754........69***************************98443 PP

>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.1   1.9e-05     0.042      27      58 ..      18      48 ..       7      83 .. 0.85
   2 ?    2.8   0.0     0.039        87      91     128 ..      58      86 ..      53     103 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.9e-05
                TTSEEEEEEESTTT-HHHHHTHHHHHTHHHHH CS
     Redoxin 27 kgkkvvvnfvpgafcPtCsaehpyleklaell 58
                + k vvv ++++ +c++C+   p +ek++e +
  KHJ33599.1 18 AHKYVVVDSYAT-WCGPCRVIGPVFEKFSENY 48
                4677999*****.******9888999998875 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.039
                 E-TTSHHHHHTT-TTEEE.GGGEEE-EEEEEEETTEEE CS
     Redoxin  91 sDgsaaftkalGlrleedaseglrtpryavidedgkvv 128
                 +D+ ++++++l++r         ++p+++ + + +k+ 
  KHJ33599.1  58 TDEVQSLSEHLKIR---------AMPTFTFFHDGNKLD 86 
                 89999999999988.........999999988877765 PP

>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.5e-05     0.034      10      42 ..      12      44 ..       6      80 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.5e-05
                   HHHHHHHT--EEEEE--TT-HHHHHHHHHHHH- CS
  Thioredoxin_7 10 lakaaergkpvlvffgaswcftCqalerdflsd 42
                   ++++ + +k v v+  a+wc++C+++  +f++ 
     KHJ33599.1 12 FDAMIKAHKYVVVDSYATWCGPCRVIGPVFEKF 44
                   56788999*****************98888765 PP

>> HyaE  Hydrogenase-1 expression protein HyaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   3.7e-05     0.083      49     100 ..      36      89 ..      33      93 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.7e-05
                 HHHHHHCT-TTS-EEEEEE..THHHHHHHHHCCT-TSSSEEEEEETTEEEEEEE CS
        HyaE  49 vlpEllkaFpnalraavva..dreqeealaerfgvlktPsllflrdgeylgvla 100
                 v++ + ++F +   ++ +a  d+++ + l e+ +++ +P++ f+ dg+ l  + 
  KHJ33599.1  36 VIGPVFEKFSENYPQIYFAkfDTDEVQSLSEHLKIRAMPTFTFFHDGNKLDQVT 89 
                 5667788899888888888678888899*******************9887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 802.16
//
Query:       KHJ33600.1  [L=605]
Description: putative fyve zinc finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-20   72.8   2.5    1.9e-20   72.8   2.5    3.0  3  FYVE        FYVE zinc finger
    2.3e-06   27.8   3.0    2.3e-06   27.8   3.0    3.5  3  zf-RING_2   Ring finger domain
    0.00051   19.8   2.5    0.00051   19.8   2.5    3.3  3  zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
    0.00074   19.2   6.0    0.00074   19.2   6.0    3.1  3  zf-RING_11  RING-like zinc finger
      0.002   18.0   1.9      0.002   18.0   1.9    3.4  4  zf-C3HC4    Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.023   14.9   1.0      0.023   14.9   1.0    2.8  3  FYVE_2      FYVE-type zinc finger


Domain annotation for each model (and alignments):
>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.8   2.5   6.3e-24   1.9e-20       2      64 ..     196     288 ..     195     292 .. 0.86
   2 ?   -1.8   0.2       1.2   3.7e+03      10      19 ..     448     457 ..     443     494 .. 0.68
   3 ?   -0.4   2.8      0.45   1.3e+03       5      21 ..     551     567 ..     547     586 .. 0.69

  Alignments for each domain:
  == domain 1  score: 72.8 bits;  conditional E-value: 6.3e-24
                 ---...--SB-TTT--B--SSS--EE-TTT--EE-STTS-EEE.EE..............................GGGTEEEEEEE-HHHHH CS
        FYVE   2 kwkddsevkkCeiCakkFsllrrrhhCrlCGkvvCekCssklvall..............................ekeaeeksvrvCkeCla 64 
                 +w+ dsev+ C+iC+++Fs++ r+hhCr CG+vvC++Cs ++++ +                              e     ++vr+C+ C+ 
  KHJ33600.1 196 RWQLDSEVNACPICKSRFSFFLRKHHCRRCGRVVCDSCSPHRITIPfqyivqppaqgedslpqirrirqpdienssEYIGGGRQVRLCNPCVP 288
                 8******************************************999999999888888888888888887776655555556777******85 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.2
                 SB-TTT--B- CS
        FYVE  10 kkCeiCakkF 19 
                 ++C iC+++ 
  KHJ33600.1 448 DECWICHEEL 457
                 5677776654 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.45
                 ...--SB-TTT--B--S CS
        FYVE   5 ddsevkkCeiCakkFsl 21 
                 d s+ ++C iC ++F++
  KHJ33600.1 551 DCSDDAECAICLEEFEI 567
                 5567789********75 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   7.6     0.013        39       2      30 ..     205     234 ..     204     240 .. 0.71
   2 ?    0.6   0.8      0.26   7.6e+02       1      10 [.     448     457 ..     448     481 .. 0.77
   3 !   27.8   3.0   7.6e-10   2.3e-06       2      42 ..     557     598 ..     556     598 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.013
   zf-RING_2   2 eCpICleel...ssadsvlllpCgHvfhreCl 30 
                  CpIC +++    ++++++   Cg v + +C 
  KHJ33600.1 205 ACPICKSRFsffLRKHHCR--RCGRVVCDSCS 234
                 7****99994333333333..6*********6 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.26
   zf-RING_2   1 deCpICleel 10 
                 deC IC eel
  KHJ33600.1 448 DECWICHEEL 457
                 6899999887 PP

  == domain 3  score: 27.8 bits;  conditional E-value: 7.6e-10
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssst.CPl 42 
                 eC+IClee++ + ++ +l+C   fh +C++ w+++++  CP+
  KHJ33600.1 557 ECAICLEEFEIGVDMGRLECFCRFHLKCIRGWFKTRPGkCPI 598
                 8***************999*655**********999989**6 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   6.8      0.41   1.2e+03       2      26 ..     206     233 ..     205     238 .. 0.74
   2 ?   -1.4   0.5      0.73   2.2e+03       1       9 [.     449     457 ..     449     463 .. 0.83
   3 !   19.8   2.5   1.7e-07   0.00051       1      39 [.     557     598 ..     557     598 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.41
  zf-C3HC4_2   2 CpiCldmlkdpsvvt...pCgHvfCqkC 26 
                 CpiC  +++  ++      Cg v C +C
  KHJ33600.1 206 CPICKSRFSFFLRKHhcrRCGRVVCDSC 233
                 ****999885433334449999999999 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.73
  zf-C3HC4_2   1 kCpiCldml 9  
                 +C iC ++l
  KHJ33600.1 449 ECWICHEEL 457
                 699**9987 PP

  == domain 3  score: 19.8 bits;  conditional E-value: 1.7e-07
  zf-C3HC4_2   1 kCpiCldmlkdpsvvt..pCgHvfCqkCilrsLeekn.eCPl 39 
                 +C+iCl++++ ++++   +C  +f+ kCi+ + +    +CP+
  KHJ33600.1 557 ECAICLEEFEIGVDMGrlECFCRFHLKCIRGWFKTRPgKCPI 598
                 6*************9889*****************999***6 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.2       1.7   5.1e+03       2       8 ..     206     212 ..     206     214 .. 0.77
   2 ?    2.3   0.5     0.049   1.5e+02       1      13 [.     449     461 ..     449     469 .. 0.87
   3 !   19.2   6.0   2.5e-07   0.00074       1      29 []     557     585 ..     557     585 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.7
  zf-RING_11   2 CsICLee 8  
                 C IC + 
  KHJ33600.1 206 CPICKSR 212
                 9***665 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.049
  zf-RING_11   1 eCsICLeefkpgq 13 
                 eC IC ee+  +q
  KHJ33600.1 449 ECWICHEELPSCQ 461
                 9******987766 PP

  == domain 3  score: 19.2 bits;  conditional E-value: 2.5e-07
  zf-RING_11   1 eCsICLeefkpgqalfilpCsHtFHfkCI 29 
                 eC+ICLeef+ g  +  l+C   FH+kCI
  KHJ33600.1 557 ECAICLEEFEIGVDMGRLECFCRFHLKCI 585
                 9**************999**********9 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   7.1       2.2   6.5e+03       1      26 [.     206     234 ..     206     239 .. 0.77
   2 ?   -2.5   0.1       1.6   4.8e+03      21      26 ..     282     287 ..     281     289 .. 0.83
   3 ?   -3.7   0.3         4   1.2e+04       1       7 [.     450     456 ..     450     458 .. 0.82
   4 !   18.0   1.9   6.6e-07     0.002       1      39 [.     558     597 ..     558     598 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.2
                 -TTT-S--SS-E....E-TTS--B-CHHH CS
    zf-C3HC4   1 CpiCleeakepn...elleCkHsfCskCi 26 
                 CpiC++ ++          C+  +C +C 
  KHJ33600.1 206 CPICKSRFSFFLrkhHCRRCGRVVCDSCS 234
                 9***9988754444479999999999997 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.6
                 B-CHHH CS
    zf-C3HC4  21 fCskCi 26 
                 +C++C+
  KHJ33600.1 282 LCNPCV 287
                 799997 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 4
                 -TTT-S- CS
    zf-C3HC4   1 CpiClee 7  
                 C iC ee
  KHJ33600.1 450 CWICHEE 456
                 9999886 PP

  == domain 4  score: 18.0 bits;  conditional E-value: 6.6e-07
                 -TTT-S--SS-E...E-TTS--B-CHHHHHHHHCTSSB--T CS
    zf-C3HC4   1 CpiCleeakepn..elleCkHsfCskCirkilksrkkvkCP 39 
                 C+iClee+++ +    leC  +f+ kCir + k  +  kCP
  KHJ33600.1 558 CAICLEEFEIGVdmGRLECFCRFHLKCIRGWFK-TRPGKCP 597
                 **********9977789****************.99999*9 PP

>> FYVE_2  FYVE-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   1.0   7.8e-06     0.023      53      87 ..     202     235 ..     182     245 .. 0.84
   2 ?   -3.5   0.2       3.8   1.1e+04      55      62 ..     448     455 ..     442     464 .. 0.57
   3 ?    1.7   0.9     0.093   2.8e+02      50      80 ..     551     581 ..     529     592 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 7.8e-06
      FYVE_2  53 gethCilCleefkllvnskrqCldCklnvCkkCsv 87 
                 +++ C  C ++f +++  k++C  C   vC +Cs 
  KHJ33600.1 202 EVNACPICKSRFSFFLR-KHHCRRCGRVVCDSCSP 235
                 4689**********996.578************95 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 3.8
      FYVE_2  55 thCilCle 62 
                 ++C  C+e
  KHJ33600.1 448 DECWICHE 455
                 33444443 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.093
      FYVE_2  50 aklgethCilCleefkllvnskrqCldCkln 80 
                  +  + +C  Cleef++ v   r    C+++
  KHJ33600.1 551 DCSDDAECAICLEEFEIGVDMGRLECFCRFH 581
                 5667889**********99998877778776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       631  (0.0351944); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.57u 0.23s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 4379.56
//
Query:       KHJ33601.1  [L=529]
Description: putative glycoprotease family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.7e-47  161.3   0.1    2.7e-45  155.2   0.1    3.2  1  Peptidase_M22  Glycoprotease family
  ------ inclusion threshold ------
      0.029   14.2   0.0      0.071   12.9   0.0    1.7  1  YycC           YycC-like protein


Domain annotation for each model (and alignments):
>> Peptidase_M22  Glycoprotease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.2   0.1     3e-49   2.7e-45       8     271 .]     132     482 ..     125     482 .. 0.83

  Alignments for each domain:
  == domain 1  score: 155.2 bits;  conditional E-value: 3e-49
                    EEEEEE....SSSSHHHHHHHHHHHHHHHHHHHHHHH..................TSTGGGEEEEEEEEESS-HHHHHHHHHHHHHHHHHCT--EE CS
  Peptidase_M22   8 asqkelhakyGGvvPelasraHserllplieealaea..................glsledldaIavtkgPGlftgLrvGvsfAkglalalnkPlv 85 
                    +s+    ++yGG++P  a++ H+++l  l++ al++                   +  +++ + I +t+gPG+  +L  G  +Akgla++l++Pl+
     KHJ33601.1 132 TSD---NRAYGGIHPLAAHESHQKTLAGLLNLALEQIpepdhnasqslndtlkigNKLIRKPHFITATRGPGMRASLTTGFDTAKGLAVGLQIPLL 224
                    344...379****************************99*999999999988665455568899******************************** PP

                    EEEHHHHHHHCCHCT...SEC..............SSC.EEEEESSSTEEEEEECT.TEEEEEEEESSSEHHHHHHHHHHHHT..S.......... CS
  Peptidase_M22  86 gVnhleahalaarle...eke..............efP.vvllvsGghtqvylvke.gryeilgetlddaagealdkvarllglpy.......... 152
                    gVnh++ahal++rl    +                efP ++llvsGght + l+++  +++i+++t d a+g++ldk ar++ lp           
     KHJ33601.1 225 GVNHMQAHALTPRLVsaiN-AsknesnttatgikpEFPyLSLLVSGGHTLLALSRSiWDHTIIANTNDLALGDMLDKSARAI-LPTsyisqlssvm 318
                    *************985542.0345677888999999*********************************************9.7775566665555 PP

                    ..................SCCHHHHHHHCTCS.......EET....................................TEEE.CHHHHHHHHHHST CS
  Peptidase_M22 153 ..................pggpkieklakegkkiefprplkg....................................ldfsfsGlktavlkelek 194
                                                                                                  ++fsfsG+++++++ + k
     KHJ33601.1 319 ygraleeftfpessdvhsY----------------------TppkafpiarngsehgytwkitppyispgpegrakyfNQFSFSGIGSKAINIMVK 392
                    5555555444444444431......................04444444555566666666666666688********99**************44 PP

                    ..T.....HHHHHHHHHHHHHHHHHHHHHHHHHH...CTBSEEEEESGGGGXHHHHHCHCCHHHH..TT.SEEEXXXHHHHSSXCHHHHH CS
  Peptidase_M22 195 ..e.....vedlaasfqeavvdhlvekteralkl...pkakelvilGGvaankrLrealeeeaee..lg.lkliiPplkyctdnaamiaw 271
                      +     ++ la  +   +++hl +++++al+l    ++k lv++GGva+n+ Lr+ l++  +   ++ ++l+iP++++ctdnaamiaw
     KHJ33601.1 393 cpNmledeRRCLAKTVMTVAFEHLGSRVHAALNLehlSNVKVLVVSGGVASNRFLRKVLRTFLDTrgFShIELLIPSPELCTDNAAMIAW 482
                    45367799999*********************9988899999***************99876555354469******************9 PP

>> YycC  YycC-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   7.9e-06     0.071       9      48 ..     210     250 ..     205     253 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 7.9e-06
        YycC   9 eTAvkLskkLnvPLEhlMHmPkHILlqKlae.lekeeeeen 48 
                 +TA+ L+  L++PL  + Hm  H L  +l+  ++++++e+n
  KHJ33601.1 210 DTAKGLAVGLQIPLLGVNHMQAHALTPRLVSaINASKNESN 250
                 9************************9999762444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (529 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3742.14
//
Query:       KHJ33602.1  [L=2185]
Description: putative bifunctional pyrimidine biosynthesis protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     7e-110  365.5   0.3    4.2e-82  274.8   0.0    2.4  2  CPSase_L_D2      Carbamoyl-phosphate synthase L chain, ATP bi
    4.4e-48  162.3   0.0    1.1e-47  161.0   0.0    1.7  1  CPSase_sm_chain  Carbamoyl-phosphate synthase small chain, CP
    1.8e-45  154.6   0.0    4.1e-45  153.4   0.0    1.7  1  OTCace_N         Aspartate/ornithine carbamoyltransferase, ca
    4.8e-43  147.1   0.0    1.2e-42  145.8   0.0    1.8  1  GATase           Glutamine amidotransferase class-I
    7.8e-38  129.6   0.0    2.1e-37  128.2   0.0    1.8  1  CPSase_L_D3      Carbamoyl-phosphate synthetase large chain, 
    1.7e-29  102.9   0.0    3.6e-29  101.9   0.0    1.6  1  OTCace           Aspartate/ornithine carbamoyltransferase, As
    2.3e-17   63.0   0.0    7.2e-17   61.4   0.0    2.0  1  MGS              MGS-like domain
      5e-17   62.1   0.6    2.5e-08   33.7   0.1    2.5  2  Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
    1.1e-15   57.7   0.2      4e-08   33.0   0.0    2.6  2  ATP-grasp        ATP-grasp domain
    2.4e-10   40.3   0.0    1.5e-05   24.7   0.0    2.6  2  ATPgrasp_Ter     ATP-grasp in the biosynthetic pathway with T
    8.9e-07   29.1   1.3       0.12   12.4   0.1    3.6  3  ATP-grasp_3      ATP-grasp domain
    0.00014   21.7   0.2      0.011   15.5   0.2    2.5  1  Peptidase_C26    Peptidase C26
  ------ inclusion threshold ------
      0.041   13.6   0.4        5.2    6.8   0.0    3.3  3  GARS_A           Phosphoribosylglycinamide synthetase, ATP-gr


Domain annotation for each model (and alignments):
>> CPSase_L_D2  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  274.8   0.0     3e-85   4.2e-82       1     210 [.     565     768 ..     565     769 .. 0.99
   2 !   88.6   0.1   2.8e-28   3.8e-25       4     208 ..    1103    1300 ..    1100    1302 .. 0.89

  Alignments for each domain:
  == domain 1  score: 274.8 bits;  conditional E-value: 3e-85
                  SHHHHHHHHHHTT-BBSSEECSSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSSEEEEEE CS
  CPSase_L_D2   1 DkesakealkkinvpvvpssaapvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkgpkeiEve 98 
                  D+e +++ ++ i++++++s++a  +t+eea+++++eig+Pvii+aa++lGG+G+++a+ne+el  l++ka+a++      +qvl+e+s+kg+keiE+e
   KHJ33602.1 565 DRELFARSMESIGEKCAKSASA--TTIEEAIHVVREIGFPVIIRAAYALGGLGSGFANNESELLTLCSKAFAAS------PQVLIERSMKGWKEIEYE 654
                  9*********************..*************************************************9......8***************** PP

                  EEEETTS-EEEEEEEEECCEC..TCCCCEEEES-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEEEETTTTEEEEEEEESS--CCHHHHHHHHS-- CS
  CPSase_L_D2  99 vlrDakgnvitvcerenslql..rtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpkskeyyviEvNtRlsvesalaekaTGld 194
                  v+rD ++ +itvc++en+++l  +t+++i+vAPsqtL++e++++lr++av+v+r++gvvg+++++++l+p+skey++iEvN+Rls++sala+kaTG++
   KHJ33602.1 655 VVRDVHDVCITVCNMENFDPLgiHTGDSIVVAPSQTLSNEDYNMLRTTAVNVIRHLGVVGECNIQYALNPFSKEYCIIEVNARLSRSSALASKATGYP 752
                  ************************************************************************************************** PP

                  HHHHHHHHHTT--GCG CS
  CPSase_L_D2 195 lvkeaakialgekLee 210
                  l+++aak++lg++L++
   KHJ33602.1 753 LAFVAAKLGLGIPLHK 768
                  *************986 PP

  == domain 2  score: 88.6 bits;  conditional E-value: 2.8e-28
                   HHHHHHHHTT-BBSSEECSSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSSEEEEEEE CS
  CPSase_L_D2    4 sakealkkinvpvvpssaapvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkgpkeiEvev 99  
                   +++++l+ i+v+  + ++   ++l++a  + k++ yPv++++++ l G  m  +++e +l+  +k+a + ++    ++ v + k++++ keiE++ 
   KHJ33602.1 1103 KFSRMLDIIGVDQPKWKEL--TSLNDAKFFCKKVQYPVLVRPSYVLSGAAMNTVYSETDLEVYLKQAADVSR----DHPVVITKYIENAKEIEMDA 1192
                   6666677777777666666..89999*********************************************6....9******************9 PP

                   EEETTS-EEEEEEEEECCEC..TCCCCEEEES-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEEEETTTTEEEEEEEESS--CCHHHHHHHHS- CS
  CPSase_L_D2  100 lrDakgnvitvcerenslql..rtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpkskeyyviEvNtRlsvesalaekaTGl 193 
                   ++ ++g  +  +  e + +   + ++   + P q L++ + q+++ea+ k++ +++v+g  +++f+ +  ++++ viE N R s++ +  +k+ G+
   KHJ33602.1 1193 IA-KDGKLVGHFVSEHVENAgvHSGDATLILPPQDLERTTIQRIEEATRKIADALNVTGPFNIQFIAK--DNDIKVIECNVRASRSFPFVSKVMGV 1285
                   98.4566666666666655556********************************************99..69************************ PP

                   -HHHHHHHHHTT--G CS
  CPSase_L_D2  194 dlvkeaakialgekL 208 
                   dl+++a k  ++++L
   KHJ33602.1 1286 DLIEMATKAIMNAPL 1300
                   ******997666665 PP

>> CPSase_sm_chain  Carbamoyl-phosphate synthase small chain, CPSase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.0   0.0   8.1e-51   1.1e-47       3     127 ..      23     161 ..      22     162 .. 0.90

  Alignments for each domain:
  == domain 1  score: 161.0 bits;  conditional E-value: 8.1e-51
  CPSase_sm_chain   3 vLvLedGtvfeGksfg.akeavGEvvfnTgmtGYqeiltDpsYagqilvltypliGnyGv......needves...........ekikvaglvv 78 
                      +L L+dGt ++G+sfg +k+ +GE+vf+Tgm+GY+e+ltDpsY+gqilvltypl+GnyGv      +     +           ++i+vaglv+
       KHJ33602.1  23 CLELQDGTLYHGHSFGaRKSIAGELVFQTGMVGYPESLTDPSYRGQILVLTYPLVGNYGVpsreimD-----TmledlpahfesSQIHVAGLVI 111
                      699*************66999***************************************7655550.....2455555555559********* PP

  CPSase_sm_chain  79 relse.epsnwraeesLsewlkeekipgisgvDTRaLtkklrekgamkgv 127
                      +++s  ++s++ a +sL +wlke+++p+i+g+DTRaLtk+lrekg+m+g+
       KHJ33602.1 112 ASYSGeDYSHFLAISSLGSWLKEQGVPAICGIDTRALTKRLREKGSMLGR 161
                      ***9769****************************************997 PP

>> OTCace_N  Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.4   0.0     3e-48   4.1e-45       2     148 .]    1884    2024 ..    1883    2024 .. 0.96

  Alignments for each domain:
  == domain 1  score: 153.4 bits;  conditional E-value: 3e-48
                  -BSSGGGS-HHHHHHHHHHHHHHHHHHHTTT-STTTTT-EEEEEESS--HHHHHHHHHHHHHTTSEEEEEESTTTSCTTTGGSTTSSCHHHHHHHHH CS
    OTCace_N    2 hllsledlskeeieelldlaaelkekvkkekkekllkgktlallFeepStRTrvSfevAakrlGgkvlslseaediqlssvskgrkEsleDtarvls 98  
                  h+ls+++++++++++l++ a++++  v++e   ++lkg++l++lF+epStRT++Sf++A++rlGg+++ +s++     ss+skg  Esl+Dt+r+++
  KHJ33602.1 1884 HILSVDSFNRQNLHSLFTIAQDMRLGVQREGVLSTLKGRVLCTLFYEPSTRTSASFDAAMQRLGGRTVAVSTS----NSSTSKG--ESLADTIRTMG 1974
                  9**********************************************************************66....6778899..*********** PP

                  HHTSEEEEEESSHHHHHHHHHHHSSEEEEEEETSSB-HHHHHHHHHHHHH CS
    OTCace_N   99 ryvdaiviRhpgaeeleelakyasvpviNagdgdgeHPtQaLaDlltire 148 
                  +y+daiv+Rhp+++++   ak+++vp+iN+g+g+ eHPtQaL+Dl+tire
  KHJ33602.1 1975 CYCDAIVLRHPDESSAVIAAKFSTVPIINGGNGTYEHPTQALLDLFTIRE 2024
                  ***********8877888999***************************98 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.8   0.0   8.9e-46   1.2e-42       3     189 ..     235     411 ..     233     412 .. 0.94

  Alignments for each domain:
  == domain 1  score: 145.8 bits;  conditional E-value: 8.9e-46
                 EESSTSTHHHHHHHHHHTT-EEEEEETTSHHHHHHHTHHSTSEEEEEEESSCTT.TTTHHHHHHHHCT.STS-EEEETHHHHHHHHHTTTEEEEEECEE CS
      GATase   3 iDnydsvtenlvhalvelgvkvevvpidasaeeilellknpdgilvsgGpgspg.vegkieaikeare.nkiPiLGICLGmQllaiefgrkvvkekeke 99 
                 +D++  ++++ +++l+++gv+v + p+d ++     l k++dg+++s+Gpg+p+  e + ++i +a++ n++Pi+GICLG+Qlla + g++++k+k ++
  KHJ33602.1 235 VDVG--LKYSQLRCLLRRGVDVLICPWDFDFIPL--LGKECDGLFISNGPGDPAmLEMTSKNIARAIDiNRTPIFGICLGHQLLARAAGASTIKMK-YG 328
                 6777..99********************988777..479***************999999999999999***************************.** PP

                 EEEEEEEEEETTTCGGTTTTSEEEEEEEEEEEEESGCHHHTTEEEEEEEETTEEEEEEEEETTTEEEESSBTTSTTSTTHHHHHHHHHHH CS
      GATase 100 hhggtmrlgddetallyglknevierhrHryevnpkelepaglevtakseddeelmeiiekknpfvgvQFHPEststpegpellfnflik 189
                 ++g+++++++    ll+g  +++i++++H+++v+  +++ ++++ ++++++d+++++i+++++p+++vQFHPEs ++p+++e+lf+ +++
  KHJ33602.1 329 NRGQNIPCTN----LLTG--KCYITSQNHGFAVDS-STLTSEWTELFVNANDGSNEGIFHLHKPYFSVQFHPESAPGPKDTEFLFDIFLD 411
                 **********....5555..6*************8.**************************************************9986 PP

>> CPSase_L_D3  Carbamoyl-phosphate synthetase large chain, oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.2   0.0   1.5e-40   2.1e-37       2     122 .]     854     974 ..     853     974 .. 0.96

  Alignments for each domain:
  == domain 1  score: 128.2 bits;  conditional E-value: 1.5e-40
  CPSase_L_D3   2 elkeptdeRifaiaealrrglsveeiheltkidpwFLekleelvelekelkkkkk.eldeellreakklGfsDkqiaelleeeeeeevrelrkklgil 98 
                  el++p+d+R+faia+a+++g+sv++i e+tkid+wFL++l+ l ++ k l+++ + +++ +llr+ak+lGf Dkq+a++ + +++ ++r+lr ++gi 
   KHJ33602.1 854 ELQTPSDQRLFAIANAMHSGYSVDKIWEMTKIDKWFLTRLKGLSDFGKLLSNYCTeSVPIKLLRQAKQLGFCDKQLAKFFT-STDIAIRRLRIEAGIV 950
                  799************************************************998889999******************987.66677*********** PP

  CPSase_L_D3  99 pvykrvDtcAaeFeaetpYlYstY 122
                  p +k++Dt+AaeF+a t+YlY tY
   KHJ33602.1 951 PFVKQIDTVAAEFPAFTNYLYLTY 974
                  ***********************9 PP

>> OTCace  Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.9   0.0   2.6e-32   3.6e-29       2     156 ..    2031    2181 ..    2030    2182 .. 0.89

  Alignments for each domain:
  == domain 1  score: 101.9 bits;  conditional E-value: 2.6e-32
                  C.EEEEESS.TTSHHHHHHHHHHHHCT-EEEEES-TTSSH-HHHHHHHHHHHHHHT-EEEEESSCHHHHTT-SEEEE--SSETTCCGGHH...HHHH CS
      OTCace    2 glkiafvGd.kknnvanslikllarlgmdvvlvaPkglepdkevleeakknakksggsititedleeavkgaDvvytdvwvsmgeekere...erlk 94  
                  gl+i+f Gd k++++++sl+kll  ++++++lv+Pk+l    ev++ ++ +   ++  ++ te   e ++  Dv+y ++++     ker+   +++k
  KHJ33602.1 2031 GLTITFTGDlKHGRTVHSLVKLLQHYDVKIQLVSPKALALPSEVIKLIRLK--PNQLLVESTELTPEIISCSDVLYCTRIQ-----KERFkdiSEYK 2120
                  89***********************************99999999666553..345666666666699*************.....66664556677 PP

                  HHCC.CSB-HHHHHHS-TT-EEEE-S---BTTTB-HHHHTSTTBHHHHHHHHHHHHHHHHHHH CS
      OTCace   95 klkd.yqvteellklakkdaivlHcLPakrgeEvtdeVfdsprsvvfeqaeNrlhtikAllvl 156 
                  k ++ + +++  lk+ak+ +iv+H+LP  r++E+++e + ++r+++f+q++++l++++All+l
  KHJ33602.1 2121 KSENsFILNNRTLKDAKSTMIVMHPLP--RNQEIQEELDFDQRAAYFRQMRYGLYIRMALLAL 2181
                  77777**********************..********************************97 PP

>> MGS  MGS-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.4   0.0   5.2e-20   7.2e-17       1      95 []    1381    1479 ..    1381    1479 .. 0.93

  Alignments for each domain:
  == domain 1  score: 61.4 bits;  conditional E-value: 5.2e-20
                  THHHHHHHHHHTTCEEEEEHHHHHHHHHTT--EEECCCCHSTGSGGTHCHHHHHHHHTTSCCEEEEE--THHHHHH....CHHHHHHHHHHHTTSHE CS
         MGS    1 glvelakklkelgfellATgGTakllkeagipvtevvektgegerlggrveildaikngeidlvintlypfkatva....kdgykirraaenidIpl 93  
                  ++++ + kl++lg++l+AT GTa++l+e++++v  ++ +  ++++ + + ++++++ n+ idl+in++++++ ++     ++gy++rr+a++++ pl
  KHJ33602.1 1381 EMLPSILKLQNLGYKLFATAGTADFLQENNVNVHYLEILGIDNDEQKSEFSLTQHLINNMIDLYINLPSNNRYRRPsnyiSKGYQTRRMAVDYQTPL 1477
                  5889999*************************888888777777777788************************999*******************9 PP

                  ES CS
         MGS   94 pt 95  
                  +t
  KHJ33602.1 1478 VT 1479
                  98 PP

>> Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0     4e-09   5.5e-06      26     174 ..     590     736 ..     577     737 .. 0.89
   2 !   33.7   0.1   1.8e-11   2.5e-08      13     173 ..    1111    1269 ..    1106    1275 .. 0.85

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 4e-09
                      HHHHHHHHHC-SSEEEEESSSSTTTTEEEESSGGGHHHHHHHHHTT-SCEEEEE--.ESEEEEEEEEETSSCEEEEEEEEE-SSSSS-HHHHHC CS
  Dala_Dala_lig_C  26 ellekveeelgypvfVKpareGSSvGvskveseeelkeaieeafkydekvlvEeai.egreievavlgneklevsevgeivvkkgfydyeakys 118
                      e   +v+ e+g+pv++++a +   +G   +++e+el    ++af    +vl+E+ +   +eie  v+      v+ v   v + + +d    ++
       KHJ33602.1 590 EEAIHVVREIGFPVIIRAAYALGGLGSGFANNESELLTLCSKAFAASPQVLIERSMkGWKEIEYEVVR----DVHDVCITVCNMENFDPLGIHT 679
                      4566899**************99*********************************6679*******9....6777777778888889888889 PP

                      .TT-EEESS----HHHHHHHHHHHHHHHHHTT--SEEEEEEEE.ETTTEEEEEEEES CS
  Dala_Dala_lig_C 119 ddkaqlevpaklekeveekiqelalkaykaldlrGlaRvDffl.teegeivlnEvNt 174
                      +d++ +    +l++e ++ ++++a+++ + l++ G + + + l   + e  + EvN 
       KHJ33602.1 680 GDSIVVAPSQTLSNEDYNMLRTTAVNVIRHLGVVGECNIQYALnPFSKEYCIIEVNA 736
                      9999999999*******************************9955688899999995 PP

  == domain 2  score: 33.7 bits;  conditional E-value: 1.8e-11
                       EEEETTHHCH-H-.HHHHHHHHHC-SSEEEEESSSSTTTTEEEESSGGGHHHHHHHHH..TT-SCEEEEE--.ESEEEEE.EEEETSSCEEE CS
  Dala_Dala_lig_C   13 vvlekeeakeekk.ellekveeelgypvfVKpareGSSvGvskveseeelkeaieeaf..kydekvlvEeai.egreiev.avlgneklevs 99  
                       + +++ ++ke ++ +  +  +++++ypv+V+p+   S   ++ v se +l+ ++++a+  ++d+ v++ ++i +++eie+ a+ +++kl  +
       KHJ33602.1 1111 IGVDQPKWKELTSlNDAKFFCKKVQYPVLVRPSYVLSGAAMNTVYSETDLEVYLKQAAdvSRDHPVVITKYIeNAKEIEMdAIAKDGKLVGH 1202
                       5566666666554234455799**********************************96336899********99*****9556668888888 PP

                       EEEEEE-SSSSS-HHHHHC.TT-EEESS----HHHHHHHHHHHHHHHHHTT--SEEEEEEEEETTTEEEEEEEE CS
  Dala_Dala_lig_C  100 evgeivvkkgfydyeakysddkaqlevpaklekeveekiqelalkaykaldlrGlaRvDfflteegeivlnEvN 173 
                        v e+v + g+       s+d++ +  p +le+ + ++i+e+  k+ +al+++G   + f+ + +++i + E N
       KHJ33602.1 1203 FVSEHVENAGVH------SGDATLILPPQDLERTTIQRIEEATRKIADALNVTGPFNIQFIAK-DNDIKVIECN 1269
                       899999988886......567888999*******************************99876.8888888888 PP

>> ATP-grasp  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   6.7e-08   9.2e-05       7     138 ..     579     715 ..     573     737 .. 0.86
   2 !   33.0   0.0   2.9e-11     4e-08       4     159 ..    1111    1271 ..    1108    1275 .. 0.85

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 6.7e-08
                 -B-EEEEECCHHHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHC..GTTCEEEEE----SEEEEEEEEEETTC-EEE--EEEEEEETT CS
   ATP-grasp   7 pvprflaveskeeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqaleal..keekvivEefvpfekElsvlvvrsaeGetafypvvetvqedg 103
                 + ++ + +++ ee+ ++++e+g+pv+++ +  +  G G+ + ++e++l ++ + +  ++ +v++E  ++  kE+   vvr+++    ++  +e+    g
  KHJ33602.1 579 KCAKSASATTIEEAIHVVREIGFPVIIR-AAYALGGLGSGFANNESELLTLCSKAfaASPQVLIERSMKGWKEIEYEVVRDVHDVCITVCNMENFDPLG 676
                 67888899999*****************.8999**************99998888788999***********************999999999999888 PP

                 EEE...EEEECEE-.SCHHHHHHHHHHHHHHHHHTSSEE CS
   ATP-grasp 104 ilr...lsvapaev.sekaqkkaeeiakkiveeLggvGv 138
                 i     ++vap++  s+++ +  +++a +++++Lg+vG 
  KHJ33602.1 677 IHTgdsIVVAPSQTlSNEDYNMLRTTAVNVIRHLGVVGE 715
                 8743337888877615557777888899*********95 PP

  == domain 2  score: 33.0 bits;  conditional E-value: 2.9e-11
                  TT--B-EEEEECCHHHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHC....GTTCEEEEE----SEEEEEEEEEETTC-EEE--EE CS
   ATP-grasp    4 lglpvprflaveskeeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqaleal....keekvivEefvpfekElsvlvvrsaeGetafypvv 96  
                   g+  p++  ++s ++++ +++++++pv+v+ +    +G     v se dle  l+++    ++++v++ ++++  kE+ +  + +++G+ +   v 
  KHJ33602.1 1111 IGVDQPKWKELTSLNDAKFFCKKVQYPVLVR-PSYVLSGAAMNTVYSETDLEVYLKQAadvsRDHPVVITKYIENAKEIEM-DAIAKDGKLVGHFVS 1205
                  57889**************************.99999*************99888888888899***************75.556777876666666 PP

                  EEEE....ETTEEEEEEECEE-SCHHHHHHHHHHHHHHHHHTSSEEEEEEEEEETTCTEEEEEEESS CS
   ATP-grasp   97 etvq....edgilrlsvapaevsekaqkkaeeiakkiveeLggvGvfavElFvledgellvnElapR 159 
                  e+v+    ++g+  l + p++++++  +++ee ++ki+++L++ G f + +  + d+++ v E   R
  KHJ33602.1 1206 EHVEnagvHSGDATLILPPQDLERTTIQRIEEATRKIADALNVTGPFNIQFIAK-DNDIKVIECNVR 1271
                  66651112567788999********************************86666.999999887776 PP

>> ATPgrasp_Ter  ATP-grasp in the biosynthetic pathway with Ter operon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.0   5.9e-05     0.082      49     119 ..     699     772 ..     688     782 .. 0.77
   2 !   24.7   0.0   1.1e-08   1.5e-05      45     118 ..    1231    1305 ..    1173    1316 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 5.9e-05
  ATPgrasp_Ter  49 lielaerlaeefgldglvnvQvred..edgpkLLEiNpRasGGlg.ysalaGvnlpylalklllgleteeveep 119
                   l   a ++++++g+ g  n+Q+  +   ++++++E+N+R s      s ++G  l+ +a+kl lg + +++ + 
    KHJ33602.1 699 LRTTAVNVIRHLGVVGECNIQYALNpfSKEYCIIEVNARLSRSSAlASKATGYPLAFVAAKLGLGIPLHKISNS 772
                   5678999**************988732455**********96555156677******99999999866666554 PP

  == domain 2  score: 24.7 bits;  conditional E-value: 1.1e-08
  ATPgrasp_Ter   45 kdeelielaerlaeefgldglvnvQvrededgpkLLEiNpRasGGlg.ysalaGvnlpylalklllgleteevee 118 
                    + +++ e+++++a++++++g +n+Q+  +++  k++E N Ras  +  +s + Gv+l+++a k++++ + ++ ++
    KHJ33602.1 1231 TIQRIEEATRKIADALNVTGPFNIQFIAKDNDIKVIECNVRASRSFPfVSKVMGVDLIEMATKAIMNAPLVAYPP 1305
                    456788999***********************************998357788**********999976555554 PP

>> ATP-grasp_3  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.1   0.00075         1     114     159 ..     693     739 ..     580     741 .. 0.70
   2 !   12.4   0.1     9e-05      0.12       2     158 ..    1099    1272 ..    1098    1275 .. 0.71
   3 ?    4.1   0.0     0.031        42      38     116 ..    1809    1884 ..    1802    1901 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00075
                  --HHHHHHHHHHHHHTTSTT--EEEEEEEEESS...SEEEEEEESS-- CS
  ATP-grasp_3 114 telkeevvelaeevvekleglaGyvGvDlvlkd..eepyviEvNPRlt 159
                   e+ + ++++a +v+++l g++G   +   l+   +e ++iEvN+Rl 
   KHJ33602.1 693 NEDYNMLRTTAVNVIRHL-GVVGECNIQYALNPfsKEYCIIEVNARLS 739
                  355677889999999999.99999999999998989**********85 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 9e-05
                   TSHHHHHHHHTTT.S---.........-EE..SS--SSSEEEEESS-------B--SS--TTE...............EEEE---.SEEEEEEEEE CS
  ATP-grasp_3    2 sdKlktykkLkeagvkvP.....tkleaee..leeeekklvvKprdGaggesvrvveekeeaeaaieeve........lvqefie.GkplSvslls 81  
                   ++ +k+ + L+  gv  P     t l++++  ++++++++ v p++   g ++  v  + ++e  +++ +        ++ ++ie  k++ +++++
   KHJ33602.1 1099 ENRYKFSRMLDIIGVDQPkwkelTSLNDAKffCKKVQYPVLVRPSYVLSGAAMNTVYSETDLEVYLKQAAdvsrdhpvVITKYIEnAKEIEMDAIA 1194
                   677888888888888888665554444444223444899999999888888888888887888777777788888888999999845889999999 PP

                   .SSSEEEEEEEEEEEET....TEEEEEEES-..---HHHHHHHHHHHHHTTST...T--EEEEEEEEESS.SEEEEEEESS- CS
  ATP-grasp_3   82 dgekvlvlavnrqliekaekefvyaGnvtpi..etelkeevvelaeevvekle...glaGyvGvDlvlkdeepyviEvNPRl 158 
                   +  k +   v++ + +      v +G  t i  +++l++ +++ +ee+++k+    ++ G + + ++ kd+++ viE N R 
   KHJ33602.1 1195 KDGKLVGHFVSEHVEN----AGVHSGDATLIlpPQDLERTTIQRIEEATRKIAdalNVTGPFNIQFIAKDNDIKVIECNVRA 1272
                   7766555555554444....3788888886622334466677777777777765558999999****************995 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.031
                   ESS-------B--SS--TTE.......EEEE---SEEEEEEEEE.SSSEEEEEEEEEEEET....TEEEEEEES----H CS
  ATP-grasp_3   38 prdGaggesvrvveekeeaeaaieevelvqefieGkplSvsllsdgekvlvlavnrqliekaekefvyaGnvtpietel 116 
                   p +G+ g   rv+ ++++ +   +   l  e i Gk++S  l+ ++     ++ n  l+e +e++ +  Gn +p++ ++
   KHJ33602.1 1809 PKNGMRGAVQRVIFNEKTVCLDGK---LCNEVIHGKDMSPHLVEKHLIETSIVNNSLLLEVKETSSSNFGNKSPFKDQH 1884
                   678888888888888888886666...9****************998888888889999999999999******99776 PP

>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.2   8.1e-06     0.011      97     129 ..     293     325 ..     277     394 .. 0.54

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 8.1e-06
  Peptidase_C26  97 LiraalergvPilgiCrGlqllnvalGGtlyqd 129
                    + ra+  +++Pi+giC+G+qll+ a G ++ + 
     KHJ33602.1 293 IARAIDINRTPIFGICLGHQLLARAAGASTIKM 325
                    4455555789************99999776543 PP

>> GARS_A  Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       6.8   9.3e+03      14      68 ..     422     477 ..     417     478 .. 0.77
   2 ?    6.8   0.0    0.0038       5.2      10     105 ..     573     662 ..     565     707 .. 0.83
   3 ?    2.9   0.0     0.058        80       9     100 ..    1107    1194 ..    1101    1274 .. 0.65

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 6.8
                 T--B--EEEESSHHHHHHHHHHHSSSE.EEEEESC-GGGT-EEEESSHHHHHHHHH CS
      GARS_A  14 giptaeyeaftdpeeakeyieeataka.lVvKadglaagKgvivakseeealkavk 68 
                  ++t+ y   ++  ++k++ +e++ k  l++ + gl+ g+      s ++a+ka+k
  KHJ33602.1 422 LLKTPIYFRSEENTNIKNFYSELNVKKvLILGSGGLSIGQAGEFDYSGSQAIKALK 477
                 57889999999999999999998876626667788999988888888888888776 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0038
                 HHHTT--B--EEEESSHHHHHHHHHHHSSSEEEEEESC-GGGT-EEEESSHHHHHHHHHHHCTS-TTCCCCSSEEEEE---S.EEEEEEEEECTTEE CS
      GARS_A  10 lkkagiptaeyeaftdpeeakeyieeatakalVvKadglaagKgvivakseeealkavkeilekkkfGeagekvviEelleG.eEvsllalvdgktv 105
                 ++ +g + a+ ++ t  eea ++++e ++++ +++a+   +g g   a++e+e l+  ++ +       a+ +v+iE  ++G +E+   ++ d ++v
  KHJ33602.1 573 MESIGEKCAKSASATTIEEAIHVVREIGFPV-IIRAAYALGGLGSGFANNESELLTLCSKAFA------ASPQVLIERSMKGwKEIEYEVVRDVHDV 662
                 788888999**********************.9**99999***************99998885......99**********9668877777776665 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.058
                  HHHHTT--B--EEEESSHHHHHHHHHHHSSSEEEEEESC-GGGT-EEEESSHHHHHHHHHHHCTS-TTCCCCSSEEEEE---.SEEEEEEEEE CS
      GARS_A    9 llkkagiptaeyeaftdpeeakeyieeatakalVvKadglaagKgvivakseeealkavkeilekkkfGeagekvviEelle.GeEvsllalv 100 
                  +l+ +g+  ++++++t+ ++ak + ++++ ++  v+++ + +g  +  + se++   ++k+  +     +  + vvi +++e  +E+ + a+ 
  KHJ33602.1 1107 MLDIIGVDQPKWKELTSLNDAKFFCKKVQYPV-LVRPSYVLSGAAMNTVYSETDLEVYLKQAAD----VSRDHPVVITKYIEnAKEIEMDAIA 1194
                  67778999999999999999999999999999.7888877777666655555444333333332....3345677777776523566666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 1.05u 0.29s 00:00:01.34 Elapsed: 00:00:00.47
# Mc/sec: 13938.61
//
Query:       KHJ33603.1  [L=517]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0086   16.1   0.7       0.89    9.5   0.1    2.7  3  DUF3854   Domain of unknown function (DUF3854)


Domain annotation for each model (and alignments):
>> DUF3854  Domain of unknown function (DUF3854)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       0.5     9e+03      85     112 ..      10      37 ..       7      46 .. 0.75
   2 !    9.5   0.1     5e-05      0.89      15      65 ..     158     213 ..     153     268 .. 0.77
   3 !    4.1   0.0    0.0023        42      55      97 ..     377     419 ..     363     428 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 0.5
     DUF3854  85 iknVraaikrlgklleergckvkvikwe 112
                  + ++ a+ r  + l+++g + + i++e
  KHJ33603.1  10 STMIDIAKDRARSRLKRKGLSQNFINLE 37 
                 4577788888889999999888888886 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 5e-05
     DUF3854  15 itEGakKaaallsag..yvaialpGvtngyreekdeegekiekk...klipelekl 65 
                 i+E++k  aa ++a+   ++ia++Gv ++ +++  + +++ ++    +l + ++++
  KHJ33603.1 158 IIEAEKRRAAKITANlrTCTIAINGVQMVLSTDGADGNKEFSQGlliYLRAAIAQF 213
                 89********99976558***********976555444433332123455555555 PP

  == domain 3  score: 4.1 bits;  conditional E-value: 0.0023
     DUF3854  55 kkklipeleklakegreiliaFDqDtkpktiknVraaikrlgk 97 
                   ++ ++l +++ ++  ++i F +++   t++ V+a+ikr+++
  KHJ33603.1 377 TIEPASDLVTYHIPNVPVTIQFSNNKVFVTKEMVEAEIKRVTQ 419
                 3488899999******************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       935  (0.0521501); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3613.02
//
Query:       KHJ33604.1  [L=1598]
Description: putative swi2-snf2-related atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-64  216.9   0.3    7.1e-64  215.7   0.3    1.5  1  SNF2_N      SNF2 family N-terminal domain
    1.7e-19   70.2   1.0    9.3e-19   67.8   0.1    2.7  3  Helicase_C  Helicase conserved C-terminal domain
      2e-09   37.7   0.0      2e-09   37.7   0.0    3.0  4  ResIII      Type III restriction enzyme, res subunit
     0.0075   16.6   0.8       0.05   13.9   0.8    2.5  1  HSA         HSA


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.7   0.3   1.6e-67   7.1e-64      52     349 ..     748    1033 ..     742    1034 .. 0.86

  Alignments for each domain:
  == domain 1  score: 215.7 bits;  conditional E-value: 1.6e-67
                  HHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH-------------- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N   52 kqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapklla 148 
                  ++++ +GiLaDemGLGKT+q++al++++   +e            gp+L++vP+s++ +We e+++++++ ++  ++++ ++    k++++  k   
  KHJ33604.1  748 YANNTNGILADEMGLGKTIQTIALLAHLACVHE----------EWGPHLVIVPTSVILNWEMEFKKWCPGFKIMTYYGSIEE---RKKKRIGWKNKD 831 
                  67899*********************5555333..........3479**************************888888876...333467778888 PP

                  ---EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTT........T-- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxx RF
      SNF2_N  149 dydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreep........fge 237 
                    +v+it+Y+ + r++      +v+k++ w++++lDE+h++kn +s+  +++++++t+ r++ltGTP+qn+l++l++Ll fL+++         f +
  KHJ33604.1  832 MWNVCITSYQLIIRDQ------QVFKRRPWHYMILDEAHNIKNFNSQRWQTMLTFNTRARLLLTGTPLQNNLTELWSLLYFLMPSDgknqgvggFAD 922 
                  899**********999......9**********************999999999****************************985322223333889 PP

                  HHHHHHHTHHHHH...........HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HH CS
                  xxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  238 kqtfdkllqrpie...........aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaal 323 
                   q f++++++p+e           +++   +s+L+++l++++lrr k dvek++P k e+i f++lsk +r++Y              +l+r++ + 
  KHJ33604.1  923 LQEFQDWFKKPSEqilehgreqmdNESWGIISKLHKILRPYILRRLKVDVEKQMPAKFEHIEFCRLSKRQRELYD------------GFLNRDDTKE 1007
                  99******************6655555566789******************************************............4444444444 PP

                  HHHH-HHH-HHHHHHHHHHHHH---X CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  324 kssskskekilelllelrqacnhpql 349 
                  + ++ ++  i+++l++lr++cnhp+l
  KHJ33604.1 1008 TLAFGNNFSIINCLMQLRKVCNHPDL 1033
                  4444333469**************98 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.2      0.42   1.9e+03      19      75 ..     413     472 ..     395     483 .. 0.70
   2 ?   -4.1   0.0         4   1.8e+04      38      57 ..     802     824 ..     772     825 .. 0.66
   3 !   67.8   0.1   2.1e-22   9.3e-19       2     111 .]    1281    1393 ..    1280    1393 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.42
                 EEEEESSHHHHHHHHHHHHHT....TSTEEEESTTSTHHHHHHHHHHHH.TTSSSEEEESGG CS
  Helicase_C  19 ilifvntidrlekvklllekk....gikvavlhgelpqnereeileqfn.kgesdvLiatdv 75 
                 + + +n ++++e  + + +      ++ +    ++++q++ +e  ++f  + e d L++td 
  KHJ33604.1 413 MNVLINEKEEVE--SHVDSDDdikmNLDFSNSESNMSQESSDEDENKFSiDTEEDDLLTTDQ 472
                 556667777665..333222233336777777889*************97777778888875 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 4
                 HT...TSTEEEESTTSTHHHHHH CS
  Helicase_C  38 kk...gikvavlhgelpqneree 57 
                 kk   g+k+ +++g+++ +++++
  KHJ33604.1 802 KKwcpGFKIMTYYGSIEERKKKR 824
                 22455999999999998887765 PP

  == domain 3  score: 67.8 bits;  conditional E-value: 2.1e-22
                  HHHHHHHHH.HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSS..EEEESGGGTSSSTSTTESEEEESSSSS CS
  Helicase_C    2 kleallell.kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesd..vLiatdvaerGidipkvnlVinfdlpr 95  
                  kl++l +ll kl+  g+++lif++ ++ l+ ++ +l+ +g k+++l+g+++ ++r+   ++fn++++   ++++++ ++ Gi+++++++Vi++dl++
  KHJ33604.1 1281 KLQTLDRLLrKLQTGGHRALIFTQMTKVLDILEQFLNMHGHKYLRLDGSTKIEQRQILTDRFNNDTRIlaFILSSRSGGLGINLTGADTVIFYDLDW 1377
                  78899999999****************998888888899***********************9766555799************************* PP

                  SHHHHHHHHTTSSSTT CS
  Helicase_C   96 nvtsyiqriGRtgRag 111 
                  n++  +q  +R++R+g
  KHJ33604.1 1378 NPAMDKQCQDRCHRIG 1393
                  **************97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.9      0.88   3.9e+03      86     122 ..     396     444 ..     357     466 .. 0.57
   2 ?   -2.6   0.6         1   4.6e+03      72     117 ..     599     643 ..     580     656 .. 0.58
   3 !   37.7   0.0   4.6e-13     2e-09       3     169 ..     732     892 ..     730     894 .. 0.81
   4 ?   -4.2   0.0       3.2   1.4e+04      68     118 ..    1071    1118 ..    1068    1127 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.88
                 EEEESSS-B--.......-SEEEEEHHHHHHTH................. CS
      ResIII  86 gkkvsgdkkkakekdstnkkilvttiqsldadseee.............e 122
                   ++s++k ++ +k+  n+++l+ + +++ ++ +++             +
  KHJ33604.1 396 AVEKSQQKLQQ-HKACMNMNVLINEKEEVESHVDSDddikmnldfsnseS 444
                 22333333333.45666777777777777777766666666655555541 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1
                 HHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHHT CS
      ResIII  72 eefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqsldad 117
                 e+++k+++e+++ + +++++ +k+  +++++n ++ +++ +sl++d
  KHJ33604.1 599 EALTKITPENAQVEDGSLRNFSKIT-SEKTKNDNYSLINDESLKKD 643
                 4445555554443333333333333.55555555555566665555 PP

  == domain 3  score: 37.7 bits;  conditional E-value: 4.6e-13
                 EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.......-EEEEESSHHHHHHHHHHGGGGTGG......GEEEESSS-B--. CS
      ResIII   3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee..kflflvprkslleqtleefkkflseayke..igkkvsgdkkka. 96 
                 +lr+yQ   ++ l+  l   ++++g+++ + G GKT+  ++l ++l+  ++ e    l++vp+  +   ++ efkk+ +  +      ++++++kkk+ 
  KHJ33604.1 732 TLRKYQHYGLDWLA-GLY-ANNTNGILADEMGLGKTIQTIALLAHLACVHE-EwgPHLVIVPTSVI-LNWEMEFKKWCPGFK-ImtYYGSIEERKKKRi 825
                 57889988887665.555.799*****************999999998644.55899999998655.579******999854.3365566777777776 PP

                 .......-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS...TTTHHHHHT---SEEEEEESS- CS
      ResIII  97 kekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak..kswreilekfkeavllglTATp 169
                   k+++ +++++t++q + +d+       + ++r    ++i DEaH+++    + w+  l   +   +l lT+Tp
  KHJ33604.1 826 GWKNKDMWNVCITSYQLIIRDQ-------QVFKRRPWHYMILDEAHNIKNFnsQRWQTMLTF-NTRARLLLTGTP 892
                 7789999*************99.......899999999*********998744599997666.66788889***9 PP

  == domain 4  score: -4.2 bits;  conditional E-value: 3.2
                  HHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHHTH CS
      ResIII   68 eqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqsldads 118 
                  +q   ef +f +++y++ +  v +++      +++ k + + +iq+l a++
  KHJ33604.1 1071 SQVSLEFLNFVPTKYERSSDYVASRTAVL---SAQRKFMDLREIQRLRAQK 1118
                  57777899999999988777777777666...6667777777777777666 PP

>> HSA  HSA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.8   1.1e-05      0.05      10      50 ..     294     334 ..     291     347 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.1e-05
                 --HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-- CS
         HSA  10 thhdylLeeilwhakdfkeerkskrakakklaravakyhnn 50 
                 +h+d+l  ++  ++k +  e++++r+ ak++a a+a  + +
  KHJ33604.1 294 SHRDHLCRAVSSFRKLMLIEQRNHRQLAKRIAEACAEEWLR 334
                 7**********************************987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1598 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1295  (0.0722293); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.91u 0.30s 00:00:01.21 Elapsed: 00:00:00.45
# Mc/sec: 10627.15
//
Query:       KHJ33605.1  [L=161]
Description: putative nadh:ubiquinone oxidoreductase subunit protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-07   30.6   0.1    3.3e-07   30.3   0.1    1.3  1  NDUF_B8   NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASH


Domain annotation for each model (and alignments):
>> NDUF_B8  NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.1   1.8e-11   3.3e-07      54      96 ..      48      90 ..      26     142 .. 0.82

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 1.8e-11
     NDUF_B8 54 DglgaGDYPklpvvsaderDPyedWddrdlrrnwGelvhldld 96
                D  + G Y + p +  + rDP+ dW d+++rrn+Ge++h d d
  KHJ33605.1 48 DPGMNGGYVNPPRMKRQFRDPHADWWDKQERRNFGEPIHEDND 90
                3347899********************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       346  (0.0192983); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.44
# Mc/sec: 1111.49
//
Query:       KHJ33606.1  [L=339]
Description: hypothetical protein EV44_g5451 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.18s 00:00:00.64 Elapsed: 00:00:00.36
# Mc/sec: 2838.04
//
Query:       KHJ33607.1  [L=791]
Description: putative meiotically up-regulated 71 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-28   99.9   0.0    2.8e-23   82.6   0.0    2.3  2  Diphthami_syn_2  Diphthamide synthase
    1.6e-08   34.6   0.0     0.0014   18.7   0.0    3.5  3  Ribonuc_L-PSP    Endoribonuclease L-PSP


Domain annotation for each model (and alignments):
>> Diphthami_syn_2  Diphthamide synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.5e-06     0.014       2      69 ..       6      85 ..       5      99 .. 0.75
   2 !   82.6   0.0   3.2e-27   2.8e-23      69     205 ..     115     265 ..     105     280 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.5e-06
  Diphthami_syn_2  2 kvavlysGGkDsilaLykalke.sevesLvsvis......enke.....symfhvvnvhlvellaesvGiplikletaGe 69
                      v++l+sGGkDs ++L + +++ +++  L ++ +      +n++     s+m+ +v   ++ l   ++ ipl ++ ++G 
       KHJ33607.1  6 NVIALISGGKDSFFSLLHCMENgHKIVALGNLHPperfdvQNEDdsdlnSFMYQTVGHTVIPLYEKALDIPLYREPITGT 85
                     589******************98999999887542222222221222338899999999999999999999988888776 PP

  == domain 2  score: 82.6 bits;  conditional E-value: 3.2e-27
  Diphthami_syn_2  69 eeekevedLkgtlkkl.dveavviGaieseyqksriervCrelGlksvaPLWk......kdpeelleeiveekfevivvavkaegldeslLGrr 155
                      e e  v  L+ ++++  d++a+++Gai+s yq++rie v  +lGl s+  LW+      k++  l+e + ++k +++++ v+  gldes+L ++
       KHJ33607.1 115 ETECLVPLLRRIMNEHpDANALCTGAIYSTYQRTRIETVACRLGLISLSYLWQypllplKNSISLIEDMEKAKLDAMIIKVAGSGLDESFLWQK 208
                      4444555556666543269*********************************8555555688889999999********************998 PP

  Diphthami_syn_2 156 id.kklidelkklsekygidk....agegGeaetlvlDaP..lfkkrlevkelekkw 205
                      ++ k ++  ++k ++++g++      gegGe+etlvlD+P  lfk r+e+ + +k  
       KHJ33607.1 209 LTsKSTLKRIQKATQRFGVEDdgaiLGEGGEFETLVLDGPsyLFKSRIEILDSDKII 265
                      87366899***********86332258*************8889******9988764 PP

>> Ribonuc_L-PSP  Endoribonuclease L-PSP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   1.5e-07    0.0014      40     112 ..     361     433 ..     357     441 .. 0.83
   2 !    8.9   0.0   0.00016       1.5       4      37 ..     465     506 ..     463     526 .. 0.75
   3 ?    2.6   0.0     0.014   1.2e+02      69     114 ..     606     651 ..     604     656 .. 0.80

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 1.5e-07
                    SHHHHHHHHHHHHHHHHHHTT--GGGEEEEEEEESSGGGHHHHHHHHHHHSSSSTS--EEEEEE-S.BSGGG-S CS
  Ribonuc_L-PSP  40 dveeqtrqalenlkavLaaagaslsdvVkvtvFladiedfaevnevyaeafdelkeaParsaveVa.aLpkgak 112
                    +++e+++  ++ ++  L    ++ +dv    v+l ++++f+ +n+ y+ +f+ + ++Par+++ +  ++p++++
     KHJ33607.1 361 NINEEAKCLIDSISLRLIREKLKPNDVTSSIVLLRSMQNFELMNKLYGTLFSRP-NPPARVTISCGdNMPPRVN 433
                    667777777778888888888999******************************.7*******98524556665 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00016
                    STTTSSS-BSEEE.....ETT....EEEEEEE-SB-TTTSCB. CS
  Ribonuc_L-PSP   4 apaaaapYsqavk.....agn....lvyvsGqlpldpetgelv 37 
                    apa ++pYsqa+        +    +  +sGq+pl p+t++l 
     KHJ33607.1 465 APANIGPYSQAIIrssddG-DsdlcTASISGQIPLIPHTMKLP 506
                    78999*****887665530.144447899***********994 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.014
                    EEEEESSGGGHHHHHHHHHHHSSSSTS--EEEEEE-SBSGGG-SEE CS
  Ribonuc_L-PSP  69 vtvFladiedfaevnevyaeafdelkeaParsaveVaaLpkgakvE 114
                    +t +++ ++d+  +n+  ++  ++   +P  +aveV +Lp+  ++E
     KHJ33607.1 606 TTSLIKVLPDWSLFNYLSGDQRSNSRDPPPFFAVEVGELPRASAIE 651
                    5667777778888888877777777679************999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (791 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       459  (0.025601); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 5690.75
//
Query:       KHJ33608.1  [L=221]
Description: putative h2a domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0057   16.9   0.2      0.028   14.7   0.1    2.1  2  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
  ------ inclusion threshold ------
      0.072   13.5   0.1       0.18   12.2   0.1    1.6  1  DUF2805        Protein of unknown function (DUF2805)
      0.085   12.2  18.9       0.11   11.8  18.9    1.2  1  CDC27          DNA polymerase subunit Cdc27
       0.25   10.9  24.2       0.33   10.5  24.2    1.2  1  PPP4R2         PPP4R2
       0.42    9.5  14.1       0.58    9.0  14.1    1.2  1  DUF2722        Protein of unknown function (DUF2722)
        2.3    8.1  24.4        3.2    7.6  24.4    1.3  1  TFIIA          Transcription factor IIA, alpha/beta subunit


Domain annotation for each model (and alignments):
>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.099     3e+02       2      25 ..      24      48 ..      23      50 .. 0.90
   2 !   14.7   0.1   9.3e-06     0.028      41      65 .]      46      70 ..      42      70 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.099
                   XXXHHHHHHHHHCC.TTXS-B-HHH CS
  CBFD_NFYB_HMF  2 eLPiarvkkImksd.pdarkiakdA 25
                    LP++ v+++ k + p + +i + A
     KHJ33608.1 24 NLPKSVVTRLAKGAlPANTQIQSNA 48
                   69****************9999887 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 9.3e-06
                   HHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF 41 aseAaeickkekrKtikaehiklAv 65
                   +++A+ei+ +++rKt++a+++  A+
     KHJ33608.1 46 SNAANEIAAASDRKTVNANDVFTAL 70
                   57899***************99886 PP

>> DUF2805  Protein of unknown function (DUF2805)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   5.9e-05      0.18      35      68 ..      69     102 ..      67     105 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.9e-05
     DUF2805  35 elkassFklWrkrvsgrktKhkkkreeevsrfks 68 
                  l +s+F  Wr r +++ +Kh++  e+++++ ++
  KHJ33608.1  69 ALDESEFSGWRPRLEAELKKHTEIIEQRKEKVRL 102
                 5889*******************77776666655 PP

>> CDC27  DNA polymerase subunit Cdc27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8  18.9   3.8e-05      0.11     159     286 ..      70     210 ..      28     219 .. 0.54

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.8e-05
       CDC27 159 a...........akekaaketssakseskkk..saekskdaskettkekaekaasskaaslkkk..asaksnimksffkakpaekkkkteakeqkveee 242
                             +  + +k t+++++ ++k   ++   ++a+k+++ +  +  + + a+s k    + +  ++++++f + ++++ + +e++  ++++e
  KHJ33608.1  70 LdesefsgwrprLEAELKKHTEIIEQRKEKVrlKEIDGAPAAKKMKRAPVK--PVDDANSYKSDpvDINLTSSKSNGFLSSTNAELDGSEKEDDESKDE 166
                 145555555554333334444444433222200333344444444444444..3333333333300334456677888888888888888888888888 PP

       CDC27 243 seeekekedkeleddsaaeeeeeeekstkkekrrqkklessdee 286
                 se+e+++++++ ed+ + +e++e ++ ++ e++ q + e++d++
  KHJ33608.1 167 SEKEDHDKEDDDEDEGEDDEDDEDDEAVPIEEQEQEEEEETDNS 210
                 88888888888888887666666666666644444444444433 PP

>> PPP4R2  PPP4R2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5  24.2   0.00011      0.33     174     275 ..      92     207 ..      28     219 .. 0.40

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00011
      PPP4R2 174 ssqedsedvslvsipwvdekteselspfikeidsimsvnlgfedeeekeedd.....neseesaseseeiteekdesvkvee..........kdddeed 257
                   ++++e+v l +i+  ++ ++ +++p+ k +d  +s +++  d + ++++      +++ e + +++e+ e+kdes k ++          +dd++++
  KHJ33608.1  92 IIEQRKEKVRLKEIDGAPAAKKMKRAPV-KPVDDANSYKSDPVDINLTSSKSngflsSTNAELDGSEKEDDESKDESEKEDHdkedddedegEDDEDDE 189
                 3333444444444444444443333333.3444444444444444444443344443222333333333333333333333300000000002222222 PP

      PPP4R2 258 deedtdyveeeeddesed 275
                 d+e  + +e+e+++e+e 
  KHJ33608.1 190 DDEAVPIEEQEQEEEEET 207
                 222222222222222222 PP

>> DUF2722  Protein of unknown function (DUF2722)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0  14.1   0.00019      0.58     334     442 ..      75     208 ..      32     220 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00019
     DUF2722 334 fhhwkpeeeseg.................esssasqtksh........kRrkssssfesidlnsaseilkpaikfensaiasqekeddddddddekerk 407
                 f  w+p  e+e                  e  +a + k+         +   s  ++  +d+n +s+  +  ++  n +    ekedd+++d+ eke++
  KHJ33608.1  75 FSGWRPRLEAELkkhteiieqrkekvrlkEIDGAPAAKKMkrapvkpvDDANSY-KSDPVDINLTSSKSNGFLSSTNAELDGSEKEDDESKDESEKEDH 172
                 677777766666677777777777777774444444444401133222222333.55679999999777777777777777777777777776666554 PP

     DUF2722 408 ke..eekdkekdsikadddkdlsmdssineegetevd 442
                  +  +++d+ +d+  ++dd+ + ++++ +ee e+  d
  KHJ33608.1 173 DKedDDEDEGEDDEDDEDDEAVPIEEQEQEEEEE-TD 208
                 3300344444444444455555555554333222.22 PP

>> TFIIA  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6  24.4    0.0011       3.2     237     372 ..      54     209 ..      10     221 .] 0.47

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0011
       TFIIA 237 qvessqtdgaedaleeespv........legelsaeee.agaqkeelsreeidrireealkakelekeskkkkr.aeessla................. 308
                 +++  +t +a+d  +   +         le+el+++ e  +++ke+++ +eid        ak+++++  k    a     +                 
  KHJ33608.1  54 AASDRKTVNANDVFTALDESefsgwrprLEAELKKHTEiIEQRKEKVRLKEIDGA----PAAKKMKRAPVKPVDdA-----Nsyksdpvdinltssksn 143
                 2222223333322222111111222344444444433312334455555666665....22222222222222211.....022234577778888888 PP

       TFIIA 309 ..dlseilqlDGagddsdeeeeeeesdedsdsessdd...edeq..veEDplNSdDDvddeddddlfdtdn 372
                     s+ + lDG + ++de +++e+++ed+d+e++d+   ed +  ++++++      +++++++ ++tdn
  KHJ33608.1 144 gfLSSTNAELDGSEKEDDE-SKDESEKEDHDKEDDDEdegEDDEddEDDEAVPI----EEQEQEEEEETDN 209
                 888889999***7777776.4444444454422222211222222233333332....3333333344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1438  (0.0802053); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                       139  (0.0077528); expected 17.9 (0.001)
Passed Fwd filter:                        48  (0.00267723); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.75u 0.30s 00:00:01.05 Elapsed: 00:00:00.46
# Mc/sec: 1445.61
//
Query:       KHJ33609.1  [L=529]
Description: putative glycosyltransferase family 31 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-08   32.5   0.0    2.2e-07   30.5   0.0    1.9  1  DUF604    Protein of unknown function, DUF604
    1.9e-06   27.5   0.0    3.6e-06   26.6   0.0    1.4  1  Fringe    Fringe-like


Domain annotation for each model (and alignments):
>> DUF604  Protein of unknown function, DUF604
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   2.5e-11   2.2e-07       8      92 ..     298     388 ..     291     512 .. 0.75

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 2.5e-11
      DUF604   8 emafGGgGfaiSyplakaLakvldeC.....lerYpklyg..sddriqaClae.lGvpltkekGfHqvDlrgdllGlLaahplaplvslHHld 92 
                 ++afGG+G+ i  pla ++a+    C     +e  ++ +g   d  +  C+ e   ++lt  + +Hq+D+ gd +G+  +  ++pl slHH++
  KHJ33609.1 298 SQAFGGAGVFITIPLAFQIAQLYPICstnekIEESNTGWGpqGDILLRKCIYEnTDIRLTMLRDLHQLDIIGDPSGFYES-GISPL-SLHHFK 388
                 68*******************998885544466667777744577889***87468*********************976.68996.****86 PP

>> Fringe  Fringe-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0     4e-10   3.6e-06      77     207 ..     240     364 ..     203     369 .. 0.76

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 4e-10
      Fringe  77 aeydafleskkkWfchvDDDnyl.nveaLlklLskynhtqdvylGkpsldrpieaterteenkkkkvkfwfatGGaGfclsralalkl...aPwasggr 171
                   y+   +  +kW+++ DDD++  ++++L++   +ynh++ +y+G  s d    + +r+            a GGaG+ +   la ++    P++s+ +
  KHJ33609.1 240 FLYEDNSRPMRKWLVMCDDDTFFpSMNHLITRFLDYNHSEPLYIGTFSEDVN--NIQRHG---------SQAFGGAGVFITIPLAFQIaqlYPICSTNE 327
                 45666667778**********98578899999999**********9886643..323333.........3367*******9999876644489998877 PP

      Fringe 172 fvstsek.irlpdDctlGfiieelLgvslthsslfHs 207
                  +++s++      D+ l  +i e  +++lt    +H+
  KHJ33609.1 328 KIEESNTgWGPQGDILLRKCIYENTDIRLTMLRDLHQ 364
                 6666655155567*****************9999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (529 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 3879.58
//
Query:       KHJ33610.1  [L=326]
Description: putative wd-repeat protein pop3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.3e-41  138.1  20.1    5.9e-09   36.4   0.0    8.0  8  WD40           WD domain, G-beta repeat
    3.6e-13   49.6   0.2      0.027   14.7   0.0    4.9  5  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    4.4e-09   35.8   0.3       0.37    9.7   0.0    4.6  4  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping
    1.8e-07   30.2   1.2      0.018   13.7   0.2    4.0  4  Nup160         Nucleoporin Nup120/160
    1.3e-05   24.3   0.9      4e-05   22.7   0.0    2.3  3  PALB2_WD40     Partner and localizer of BRCA2 WD40 domain
     0.0014   17.0   0.0     0.0028   16.0   0.0    1.4  1  Frtz           WD repeat-containing and planar cell polarity 
  ------ inclusion threshold ------
      0.015   14.3   0.0      0.043   12.8   0.0    1.6  2  Coatomer_WDAD  Coatomer WD associated region
      0.019   14.7   1.5        2.2    8.0   0.1    3.6  4  Hira           TUP1-like enhancer of split


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0    0.0013       2.8      25      37 ..       5      17 ..       2      18 .. 0.78
   2 !   16.9   0.0   3.8e-06    0.0086       3      38 .]      24      59 ..      22      59 .. 0.85
   3 !   36.4   0.0   2.6e-12   5.9e-09       2      37 ..      66     102 ..      65     103 .. 0.92
   4 !   20.5   0.1   2.7e-07   0.00061       2      38 .]     108     144 ..     107     144 .. 0.91
   5 ?    5.4   0.0     0.017        38      13      37 ..     162     186 ..     148     186 .. 0.82
   6 !   26.0   0.2   5.2e-09   1.2e-05       3      37 ..     199     234 ..     198     235 .. 0.93
   7 !   30.1   0.8   2.5e-10   5.6e-07       5      38 .]     263     297 ..     259     297 .. 0.88
   8 ?    1.6   0.0      0.27     6e+02       3      20 ..     303     321 ..     301     325 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0013
                EEEEETTSEEEEE CS
        WD40 25 lasGsdDgtvriW 37
                l+++++D+t+r+W
  KHJ33610.1  5 LCTAGYDHTIRFW 17
                567777******* PP

  == domain 2  score: 16.9 bits;  conditional E-value: 3.8e-06
                EEEEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  3 clrtltGH.ss.vtslafspdgawlasGsdDgtvriWd 38
                c rt+  H +s v+ l+ spd+++la+++  ++++++d
  KHJ33610.1 24 CSRTI-QHpDSqVNRLSISPDKKYLAAAG-HRSIKLYD 59
                66776.587445**************99*.******98 PP

  == domain 3  score: 36.4 bits;  conditional E-value: 2.6e-12
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 ++l +++GH ++vt++af+ +g+w++++s+Dg v+iW
  KHJ33610.1  66 NPLLSFEGHnGNVTGIAFHCEGKWMVTSSEDGYVKIW 102
                 68999****555************************* PP

  == domain 4  score: 20.5 bits;  conditional E-value: 2.7e-07
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++r++  H ++v+++  +p++  ++s+++ g+vriWd
  KHJ33610.1 108 TLQRSYN-HsCPVNDVVIHPNQGEIISCDREGSVRIWD 144
                 6788985.9788*************************9 PP

  == domain 5  score: 5.4 bits;  conditional E-value: 0.017
                 EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriW 37 
                 v s+    dg+ l++G+  g+v++W
  KHJ33610.1 162 VASVTIATDGSTLCAGTNSGNVYVW 186
                 67888999********99******* PP

  == domain 6  score: 26.0 bits;  conditional E-value: 5.2e-09
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +++++++H + +t +  spd + la++s D+t +iW
  KHJ33610.1 199 PITHFSAHsNYITRVLLSPDVKHLATCSADHTTKIW 234
                 6789****777************************* PP

  == domain 7  score: 30.1 bits;  conditional E-value: 2.5e-10
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  tltGH  +v+++afs d+a+l++++ D+  r+Wd
  KHJ33610.1 263 STLTGHqRWVWDCAFSADSAYLVTACSDHYARLWD 297
                 689***777*************97655*******9 PP

  == domain 8  score: 1.6 bits;  conditional E-value: 0.27
                 EEEEEESS.SSEEEEEEET CS
        WD40   3 clrtltGH.ssvtslafsp 20 
                  +r + GH  +  ++a ++
  KHJ33610.1 303 IVRQYNGHhRGLVCVALND 321
                 68999***65555997555 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0058        13      33      70 ..      27      63 ..      13      72 .. 0.81
   2 !   14.7   0.0   1.2e-05     0.027      35      76 ..      72     113 ..      66     116 .. 0.89
   3 !    9.9   0.0   0.00039      0.88       4      64 ..     117     185 ..     114     213 .. 0.85
   4 ?   -0.4   0.0      0.64   1.4e+03      37      68 ..     206     237 ..     198     245 .. 0.82
   5 !   12.3   0.0   7.3e-05      0.16      36      86 ..     267     316 ..     256     321 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0058
  ANAPC4_WD40 33 eedkedsevrsLaWkpdgklLavaysdgevrlldaesg 70
                 + +++ds+v+ L+ +pd k La a +  +++l+d++s+
   KHJ33610.1 27 TIQHPDSQVNRLSISPDKKYLAAAGH-RSIKLYDIKST 63
                 557899****************8865.57999998876 PP

  == domain 2  score: 14.7 bits;  conditional E-value: 1.2e-05
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  ++++++v+++a++ +gk ++ + +dg v++ +  sg++ +s+
   KHJ33610.1  72 EGHNGNVTGIAFHCEGKWMVTSSEDGYVKIWETRSGTLQRSY 113
                  568899*****************************9987766 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00039
  ANAPC4_WD40   4 cptmDLiAlatedgellvfRlngqrvwtl........eedkedsevrsLaWkpdgklLavaysdgevrl 64 
                  cp +D +   ++ + + + R    r+w+l          ++ed  v s+    dg+ L+ +++ g+v +
   KHJ33610.1 117 CPVNDVVIHPNQGEIISCDREGSVRIWDLaenncshqLIPEEDIPVASVTIATDGSTLCAGTNSGNVYV 185
                  888998888888888999999999*****99999887678999**********************9865 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 0.64
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldae 68 
                  +++ ++ +  +pd k La   +d + ++ +++
   KHJ33610.1 206 HSNYITRVLLSPDVKHLATCSADHTTKIWEVK 237
                  56678888889999999999999999998876 PP

  == domain 5  score: 12.3 bits;  conditional E-value: 7.3e-05
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtc 86 
                  ++++ v + a++ d   L+ a+sd   rl d++++++v++++ ++    +c
   KHJ33610.1 267 GHQRWVWDCAFSADSAYLVTACSDHYARLWDIQTEEIVRQYNGHHRG-LVC 316
                  566778888999*****************************988774.555 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00024      0.53     178     216 ..      65     104 ..      44     135 .. 0.80
   2 ?    2.0   0.0     0.036        81     186     222 ..     158     194 ..     137     197 .. 0.75
   3 !    9.1   0.0   0.00025      0.56     183     224 ..     202     244 ..     186     249 .. 0.80
   4 !    9.7   0.0   0.00017      0.37     188     220 ..     270     302 ..     252     313 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00024
    Ge1_WD40 178 eegllkieehs.liveaafspdGtalatasedGevkffqv 216
                  + ll +e h  +++  af  +G  + t+sedG+vk +  
  KHJ33610.1  65 PNPLLSFEGHNgNVTGIAFHCEGKWMVTSSEDGYVKIWET 104
                 4578899999779************************975 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.036
    Ge1_WD40 186 ehsliveaafspdGtalatasedGevkffqvyledee 222
                 e+  + + ++++dG +l + ++ G v  + + +++e+
  KHJ33610.1 158 EDIPVASVTIATDGSTLCAGTNSGNVYVWYLVISEEK 194
                 444678889999******9999999999988877654 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 0.00025
    Ge1_WD40 183 kieehs.liveaafspdGtalatasedGevkffqvyledeeep 224
                 +++ hs  i+   +spd   lat+s+d + k + v  +++++p
  KHJ33610.1 202 HFSAHSnYITRVLLSPDVKHLATCSADHTTKIWEVKEVGQTSP 244
                 45566657***************************98887765 PP

  == domain 4  score: 9.7 bits;  conditional E-value: 0.00017
    Ge1_WD40 188 sliveaafspdGtalatasedGevkffqvyled 220
                   + + afs+d + l ta++d + +++ +  e+
  KHJ33610.1 270 RWVWDCAFSADSAYLVTACSDHYARLWDIQTEE 302
                 36899***********************98776 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0009         2     232     281 ..       4      47 ..       2      65 .. 0.80
   2 ?    1.9   0.0      0.03        67     228     253 ..     125     151 ..      85     180 .. 0.74
   3 ?    3.3   0.0     0.012        26     219     248 ..     207     237 ..     191     244 .. 0.81
   4 !   13.7   0.2     8e-06     0.018     227     255 ..     279     306 ..     268     312 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0009
                 EEEEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESEEESSSS CS
      Nup160 232 ylfalsrdgkLrvWnlltgkclatidllrdeeaqdessskstldpaessl 281
                 +l+++  d+++r W  l+g c +ti+ +      d+++ +++++p +++l
  KHJ33610.1   4 ILCTAGYDHTIRFWEALSGICSRTIQHP------DSQVNRLSISPDKKYL 47 
                 6899999*****************9999......5555556666666655 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.03
                 ..TTTEEEEEETT-EEEEEETTTTEEE CS
      Nup160 228 i.gqtylfalsrdgkLrvWnlltgkcl 253
                   +q  + +  r g +r+W+l+ + c 
  KHJ33610.1 125 HpNQGEIISCDREGSVRIWDLAENNCS 151
                 246777788889999999999999885 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.012
                 EEEET......TTTEEEEEETT-EEEEEETT CS
      Nup160 219 ldvavavvei.gqtylfalsrdgkLrvWnll 248
                 ++ +++v  + + ++l++ s d++ ++W ++
  KHJ33610.1 207 SNYITRVLLSpDVKHLATCSADHTTKIWEVK 237
                 45555555557889**************997 PP

  == domain 4  score: 13.7 bits;  conditional E-value: 8e-06
                 ..TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 227 eigqtylfalsrdgkLrvWnlltgkclat 255
                   +++yl+++++d+  r+W+++t  ++++
  KHJ33610.1 279 A-DSAYLVTACSDHYARLWDIQTEEIVRQ 306
                 3.99********************99986 PP

>> PALB2_WD40  Partner and localizer of BRCA2 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       1.8     4e+03     303     318 ..      13      28 ..       8      36 .. 0.78
   2 !   22.7   0.0   1.8e-08     4e-05     301     350 ..     137     186 ..     128     187 .. 0.96
   3 ?   -2.1   0.1      0.63   1.4e+03     306     327 ..     272     293 ..     259     319 .. 0.58

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.8
  PALB2_WD40 303 aiavWdlllghctall 318
                 +i +W+ l g c+  +
  KHJ33610.1  13 TIRFWEALSGICSRTI 28 
                 7899999999997654 PP

  == domain 2  score: 22.7 bits;  conditional E-value: 1.8e-08
  PALB2_WD40 301 sGaiavWdlllghctalllpesdesWslvrWsgtdsqllaGqkdGsvlvy 350
                  G++ +Wdl   +c+ +l+pe d   + v  ++  s+l aG + G+v+v+
  KHJ33610.1 137 EGSVRIWDLAENNCSHQLIPEEDIPVASVTIATDGSTLCAGTNSGNVYVW 186
                 59**********************************************96 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.63
  PALB2_WD40 306 vWdlllghctalllpesdesWs 327
                 vWd  ++  +a l++   ++++
  KHJ33610.1 272 VWDCAFSADSAYLVTACSDHYA 293
                 5666666656655555555543 PP

>> Frtz  WD repeat-containing and planar cell polarity effector protein Fritz
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.2e-06    0.0028     262     348 ..      78     165 ..      74     171 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.2e-06
        Frtz 262 vislafnpdedkLllGceDssviLydeerkitklvkaevvP.sliswhpdsaillvasergelqifDlaLspiriqllsedvePksvl 348
                 v   af  +   ++  +eD+ v ++++  ++ +    +  P + +  hp++  ++ ++  g ++i+Dla    ++ql+ e+  P   +
  KHJ33610.1  78 VTGIAFHCEGKWMVTSSEDGYVKIWETRSGTLQRSYNHSCPvNDVVIHPNQGEIISCDREGSVRIWDLAENNCSHQLIPEEDIPVASV 165
                 556667666666777899************999997777773679***********************************99997655 PP

>> Coatomer_WDAD  Coatomer WD associated region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   1.9e-05     0.043      27     159 ..      27     174 ..      22     193 .. 0.82
   2 ?   -3.3   0.0       1.5   3.4e+03     118     141 ..     283     306 ..     277     309 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.9e-05
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXX.XXXXXXXXXXXXXXXXXXXX CS
  Coatomer_WDAD  27 elgsieiypqslshnpngrfvlVcgdgeyiiyt.......alalrnkaygkgldfvwvssnrfavles.sksvkifknfkekktksikleyqvdki 114
                     ++  + +++ ls++p++++++  g+ ++++y         l   +   g+ +  ++  +++  v+ s  + vki    +++ ++s +++  v+++
     KHJ33610.1  27 TIQHPDSQVNRLSISPDKKYLAAAGHRSIKLYDikstnpnPLLSFEGHNGNVTGIAFHCEGKWMVTSSeDGYVKIWETRSGTLQRSYNHSCPVNDV 122
                    5667788999***********************999988866667788899999999999998888887*******999***************** PP

                    XX....XXXXXXXXXX.XXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXX CS
  Coatomer_WDAD 115 fg....GalLgvksegsvsfYDweqgklvrridvk...kvknVvwsddgelv 159
                    +     G ++  + egsv ++D+++++  +++  +   +v  V    dg+ +
     KHJ33610.1 123 VIhpnqGEIISCDREGSVRIWDLAENNCSHQLIPEediPVASVTIATDGSTL 174
                    *99********************99876655432222236666666665544 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.5
                    XXXXXXXXX.XXXXXXXXXXXXXX CS
  Coatomer_WDAD 118 alLgvksegsvsfYDweqgklvrr 141
                    +l  ++s++   ++D++++++vr+
     KHJ33610.1 283 YLVTACSDHYARLWDIQTEEIVRQ 306
                    57778888889999****999997 PP

>> Hira  TUP1-like enhancer of split
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.055   1.2e+02      17      46 ..      83     112 ..      78     133 .. 0.83
   2 ?    0.6   0.0      0.17   3.8e+02      29      45 ..     136     152 ..     122     158 .. 0.86
   3 ?    8.0   0.1   0.00098       2.2      12      55 ..     162     202 ..     152     231 .. 0.72
   4 ?   -0.8   0.0      0.46     1e+03      18      44 ..     278     304 ..     274     309 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.055
        Hira  17 LessgsyLlavtsvgllyvWnvkkkkvllp 46 
                 ++++g++++  +++g + +W +++ +++ +
  KHJ33610.1  83 FHCEGKWMVTSSEDGYVKIWETRSGTLQRS 112
                 689******************998887655 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.17
        Hira  29 svgllyvWnvkkkkvll 45 
                 ++g++ +W++ ++++ +
  KHJ33610.1 136 REGSVRIWDLAENNCSH 152
                 689*********99998 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.00098
        Hira  12 spasfLessgsyLlavtsvgllyvWnv...kkkkvllppvslaplls 55 
                  + + +++ gs L+a t++g++yvW +   ++k++l+p      + +
  KHJ33610.1 162 VASVTIATDGSTLCAGTNSGNVYVWYLvisEEKTSLIP------ITH 202
                 5667788899***************9955444444444......433 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 0.46
        Hira  18 essgsyLlavtsvgllyvWnvkkkkvl 44 
                 ++ + yL+   s+     W++++++++
  KHJ33610.1 278 SADSAYLVTACSDHYARLWDIQTEEIV 304
                 556678888888899999****99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       457  (0.0254894); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2405.77
//
Query:       KHJ33611.1  [L=374]
Description: hypothetical protein EV44_g1463 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.7e-05   23.5   0.1     0.0001   22.1   0.1    1.8  1  F-box       F-box domain
    0.00061   19.6   2.1     0.0013   18.6   2.1    1.5  1  F-box-like  F-box-like
     0.0023   18.1   0.3     0.0063   16.6   0.1    1.8  2  DUF1438     Protein of unknown function (DUF1438)
  ------ inclusion threshold ------
      0.032   14.1   0.2       0.37   10.7   0.0    2.6  3  F-box_4     F-box


Domain annotation for each model (and alignments):
>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.1   2.3e-08    0.0001       2      34 ..      33      65 ..      32      69 .. 0.95

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 2.3e-08
                HHHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHH CS
       F-box  2 tlsrLPsevlrhILerLplsdllalrrVSkgwr 34
                +l +LP+e+l  I ++Lp+s+l  l ++Sk +r
  KHJ33611.1 33 PLCSLPPEILVLIAQHLPPSSLAILTLCSKALR 65
                6899**************************998 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   2.1   2.9e-07    0.0013       2      32 ..      35      65 ..      34      66 .. 0.92

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 2.9e-07
  F-box-like  2 srLPdEiLlqIFsyLppsdLlrlalVCrrWr 32
                ++LP+EiL+ I ++Lpps+L+ l+l ++  r
  KHJ33611.1 35 CSLPPEILVLIAQHLPPSSLAILTLCSKALR 65
                79**********************9999765 PP

>> DUF1438  Protein of unknown function (DUF1438)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   1.4e-06    0.0063      29      75 ..     123     172 ..     111     189 .. 0.84
   2 ?   -3.2   0.0       1.8   8.2e+03      28      56 ..     319     346 ..     309     351 .. 0.64

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.4e-06
     DUF1438  29 lstrcsksetlclskeqshc.sedgwivdwdlyslcvlesvd..ylrsyr 75 
                 l +r s se +c+  e++h  ++ +w+  w ++s+   es+d  ylr+y 
  KHJ33611.1 123 LLARDSTSEIFCFRCERQHSpNKSDWVTPWRPWSWGNCESLDghYLRYYY 172
                 56789********999999735689****************988999986 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.8
     DUF1438  28 alstrcsksetlclskeqshcsedgwivd 56 
                 + s r+  +  + ++ + sh s+ +w+++
  KHJ33611.1 319 SNSRRIVVTTWQDFG-NLSHPSNSDWVAH 346
                 555555544444444.5689999999975 PP

>> F-box_4  F-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   8.2e-05      0.37       4      36 ..      33      65 ..      31      71 .. 0.94
   2 ?   -2.4   0.0      0.93   4.2e+03      33      72 ..     219     260 ..     216     267 .. 0.66
   3 ?   -0.7   0.0      0.29   1.3e+03      44      56 ..     320     332 ..     289     349 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 8.2e-05
     F-box_4  4 sLssLPlevlqhiaslLDsfsLsqLslvskllr 36
                 L+sLP e+l  ia+ L   sL  L+l sk lr
  KHJ33611.1 33 PLCSLPPEILVLIAQHLPPSSLAILTLCSKALR 65
                589***************************998 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.93
     F-box_4  33 kllrevcssllqergiVllkWekkkysk..gksswkikkkvw 72 
                 ++lr v ++++++r  +    ++  + +  g+s  ki+++ +
  KHJ33611.1 219 RTLRSVEAKIISNRLYIKAVRTRDCTDEtsGTSYEKIRRRLY 260
                 578888888888888888777776555443455556666665 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.29
     F-box_4  44 qergiVllkWekk 56 
                 ++r iV+ +W+  
  KHJ33611.1 320 NSRRIVVTTWQDF 332
                 5688888888865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 3025.19
//
Query:       KHJ33612.1  [L=606]
Description: hypothetical protein EV44_g2818 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.33   11.0   5.2      0.063   13.3   1.0    2.0  2  DUF4315   Domain of unknown function (DUF4315)


Domain annotation for each model (and alignments):
>> DUF4315  Domain of unknown function (DUF4315)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.2      0.49   8.8e+03      54      76 ..     277     299 ..     270     301 .. 0.64
   2 ?   13.3   1.0   3.5e-06     0.063       3      34 ..     357     388 ..     356     391 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.49
     DUF4315  54 allkamkegaapgpeaqkekeek 76 
                 all   ke+ +++++++++ ++k
  KHJ33612.1 277 ALLAYTKEKLMAQISSEESDKNK 299
                 67777777777777776654444 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 3.5e-06
     DUF4315   3 ekieaeieKakeKiselqarlkelekqktEaE 34 
                 +k+++e  K+++Kis++  +l+e+e q + +E
  KHJ33612.1 357 SKLQTENFKLRTKISDISDKLREIETQNQSKE 388
                 5999***********************99888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (606 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1224  (0.0682693); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.30s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4124.87
//
Query:       KHJ33613.1  [L=581]
Description: putative rad52 dna repair protein radc [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-59  199.7   0.0    3.6e-59  199.1   0.0    1.3  1  Rad52_Rad22  Rad52/22 family double-strand break repair prote


Domain annotation for each model (and alignments):
>> Rad52_Rad22  Rad52/22 family double-strand break repair protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.1   0.0     2e-63   3.6e-59       1     147 [.      32     178 ..      32     184 .. 0.98

  Alignments for each domain:
  == domain 1  score: 199.1 bits;  conditional E-value: 2e-63
  Rad52_Rad22   1 kietlqskLekklgpeyvsqregksgkkvaylegskviqlaNevFgfnGWsseiesievdeieeeqegqrysvkaealvrvtlkdGtyrediGfgtat 98 
                  +i+tlqs+Lek+lgpey+s+r g++g+kv+y+ ++k+iqlaN vFgfnGWss+i++ ++d+i+e+ ++ ++s++++++vrvtlkdGt++ediG+g+++
   KHJ33613.1  32 EIATLQSRLEKQLGPEYLSSRSGPGGQKVHYIAAEKCIQLANAVFGFNGWSSQIIDFQIDFIDENPQTLKVSLGLSVVVRVTLKDGTFHEDIGYGHVE 129
                  689*********************************************************************************************** PP

  Rad52_Rad22  99 nvpskgeafekakKeAvtdAlKrAllqfgnvlGnclydleqekkvkklk 147
                  n + k++afekakKe++tdAlKrAl++fgnvlGnc+yd+e+  +++k+k
   KHJ33613.1 130 NFKAKAAAFEKAKKEGTTDALKRALRNFGNVLGNCIYDKEYLRQISKVK 178
                  ******************************************9999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (581 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:01.01
# Mc/sec: 1738.95
//
Query:       KHJ33614.1  [L=817]
Description: putative aconitate mitochondrial [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   2.5e-142  475.1   0.0   3.3e-142  474.8   0.0    1.1  1  Aconitase    Aconitase family (aconitate hydratase)
    1.7e-38  131.9   0.0      3e-38  131.1   0.0    1.4  1  Aconitase_C  Aconitase C-terminal domain


Domain annotation for each model (and alignments):
>> Aconitase  Aconitase family (aconitate hydratase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  474.8   0.0  3.6e-146  3.3e-142       1     461 []      75     525 ..      75     525 .. 0.91

  Alignments for each domain:
  == domain 1  score: 474.8 bits;  conditional E-value: 3.6e-146
   Aconitase   1 ekiwdahlv..ee............eg...iayvpdrvllqdvtgvqalvdlaaareavrrlggtlatidhlvpvdlvidhsvgaeealeknledefer 82 
                 eki+++hl   ee            +g   ++ +pdrv++qd+++++al ++++++ +            ++vp+++++dh + ae +++ +l+++++ 
  KHJ33614.1  75 EKILYSHLDnpEEsllsntdnglhiRGnanLKLKPDRVAMQDASAQMALLQFMTCNLTS-----------TAVPTSIHCDHMIVAEGGADFDLQESITD 162
                 5777777665411344444445555333225555*********************9999...........***************************** PP

   Aconitase  83 nkeryefLksaakafgirvvppgqGIvHqvnlEyglalpgktvvgtDSHTtmigglGvlaiGvGgieaeavllgqplelkipkvvgvkltGklkegvta 181
                 nke ++fL+saa+++gi+++ppg+GI+Hq++lE+ +a p  +++gtDSHT+++ggl+ +aiGvGg++a+++++  p+elk+pk++gv+l+G+l++++++
  KHJ33614.1 163 NKEIFDFLESAARKYGIEFWPPGAGIIHQTVLEN-YAAPALMILGTDSHTPNAGGLASIAIGVGGADAVDAMVDAPWELKAPKILGVRLEGQLSDWTSP 260
                 **********************************.**************************************************************** PP

   Aconitase 182 kDlvlavigklrkkgvvgkvvEffGegvesLsledraTiaNMaaEvGAttglfpvdektleYLkatgreeaav.lveaydkaqalfelaadedaeydkv 279
                 kD++l+++gkl+++g++g+++E+fG+gv++Ls++++aTi+NM+aEvGAtt++fp+  + ++YL+ t+r + a+ + e +++  +l  laaded eyd+v
  KHJ33614.1 261 KDVILYLAGKLTVRGGTGYIIEYFGPGVNTLSATGMATITNMGAEVGATTSIFPYSPRHFHYLASTNRLSIAKkASEIFASPPKLNLLAADEDVEYDEV 359
                 ********************************************************************999984556666666666799********** PP

   Aconitase 280 leldlstlepsvagpkrPqdavplselvkkefkeelekeaaekaleyklkegtklkdgkvdiaaigSCTNssnedvraaagllakavekglkvkpgvkt 378
                 ++++lstlep+++gp++P+ ++pls +     ++++             +++++ k   +++++igSCTNss++d+++a +l+++a++ glk+ +  ++
  KHJ33614.1 360 ITINLSTLEPHINGPFTPDLSTPLSIF-----SSAV------------SSNKWPEK---ISAGLIGSCTNSSYQDMTRAEDLVKQATSVGLKPTA--DI 436
                 ************************333.....3445............56799999...*******************************88888..9* PP

   Aconitase 379 svaPGSevvkayleaeGlleiLekaGfevvgagCstCignsdrle....egeaivsssNRNFegRq..gpntrayLaSPelvvaaAlaG 461
                 +++PGSe+++a+l+++ +l ++e+aG  v++++C++Cig++ r +    + +ai +s+NRNF+gR+  +p+t++++aSPe+v+a++ aG
  KHJ33614.1 437 LITPGSEQIRATLQRDNTLATFEDAGGVVLANACGPCIGQWSRKNtsknHSNAIFTSYNRNFRGRNdgNPETMNFIASPEIVIAMSYAG 525
                 ******************************************9775544444**************76699999************998 PP

>> Aconitase_C  Aconitase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.1   0.0   3.4e-42     3e-38       3     129 ..     607     732 ..     605     734 .. 0.96

  Alignments for each domain:
  == domain 1  score: 131.1 bits;  conditional E-value: 3.4e-42
                  CCCCCTT--CHHHHSTGGGCCGHCCHHHCCCGGTTTCCCCTTTSBBSEEEETTTTEEEEHHHHHHHHHHTT--EEEE--SSBTBS---THHHHHHHHT CS
  Aconitase_C   3 kllklkGlttedeksnvdtdlkipkqfegtianiglgnelveekrankttdlddgekedvvdaaerykkegaklvviagknfGeGSSRehAAkalrll 100
                  +l k++G++t+d +s+++++lk+++++ +++an+ +g+ ++ + ++n ++d d     ++++ a+++k+++++++v+a++n+GeGS+RehAA+++r l
   KHJ33614.1 607 VLYKVSGKCTTDTISAAGPWLKYKGHLPNISANTLIGATNASTGEVNTAYDIDG-TRYSIPELAQKWKSQKISWLVVAEDNYGEGSAREHAALQPRYL 703
                  67899**********************************************966.666**************************************** PP

                  TEEEEEES-B-HHHHHHHHHTT-EEEEES CS
  Aconitase_C 101 GikaviaeSFerIfennliknglLplefk 129
                  G+++++a+S +rI+e+nl+k+g+Lpl+f 
   KHJ33614.1 704 GGRIILAKSLARIHETNLKKQGILPLTFV 732
                  **************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (817 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.42
# Mc/sec: 5850.84
//
Query:       KHJ33615.1  [L=307]
Description: putative uba ts-n domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00014   21.7   0.0    0.00041   20.2   0.0    1.8  2  UBA         UBA/TS-N domain
    0.00072   19.7   0.0     0.0023   18.1   0.0    1.9  1  UBX         UBX domain
      0.007   16.7   0.2      0.018   15.4   0.2    1.7  1  zf-C2H2_2   C2H2 type zinc-finger (2 copies)
  ------ inclusion threshold ------
      0.084   12.8   0.0       0.31   11.0   0.0    2.0  1  DUF4428     Domain of unknown function (DUF4428)
       0.25   11.1   4.2         18    5.2   3.0    2.8  2  ubiquitin   Ubiquitin family
       0.82    9.0  16.3       0.96    8.7  16.3    1.4  1  DUF4407     Domain of unknown function (DUF4407)
        3.1    8.3   9.7        4.4    7.8   9.7    1.3  1  SOBP        Sine oculis-binding protein


Domain annotation for each model (and alignments):
>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   1.6e-07   0.00041       4      37 .]       4      36 ..       3      36 .. 0.92
   2 ?   -3.0   0.0       2.8   7.2e+03       8      19 ..     292     303 ..     292     304 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 1.6e-07
                HHHHHHHHTTS-HHHHHHHHHHTTTSHHHHHHHH CS
         UBA  4 eaiqrLveMGFdreevveALratgnNeErAveyL 37
                + +++L+e G++r++++ AL   g++++ A+++L
  KHJ33615.1  4 TDLENLLEFGYPRNRAQLAL-KNGGSLQNALDWL 36
                5699****************.8888********9 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.8
                 HHHHTTS-HHHH CS
         UBA   8 rLveMGFdreev 19 
                 +L e GF +++v
  KHJ33615.1 292 TLREAGFVPSAV 303
                 68899**99988 PP

>> UBX  UBX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   8.8e-07    0.0023       5      79 ..     233     306 ..     229     307 .] 0.85

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 8.8e-07
                 SEEEEEEEETTSTEEEEEEESSSBHHHHHHHHHHHCCCCCTSEEEEETTTTEEGG.CCC.CSBCCCCTTTSCEEEEE CS
         UBX   5 datrlqiRlpdGsrlvrrFkksdtlesvyeyVdsklfekeepFqLltsfPrrelt.ksd.kktLsdlgllpnstlvl 79 
                 +++rl++ + +G+ l+++ ++++tl ++ + ++ ++ +  +  ++ t+fPr++++  +d +ktL ++g +p+++l++
  KHJ33615.1 233 TEARLRLQTSSGT-LTKTLPAETTLFELGQQIQAEAGQPVT--KFTTTFPRKTFSgTLDfSKTLREAGFVPSAVLIV 306
                 5788888888885.889999999999999999999988888..7889*******84678****************98 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.2   6.8e-06     0.018      13      83 ..      30     104 ..      22     118 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 6.8e-06
   zf-C2H2_2  13 eellehmskkhgffipereylvdleglleyl....rekieekleClyCekefkslealreHmkkkgHckineeee 83 
                 ++ l++++k+ +  ++e++ + ++++l + +    + ++ +++ C  C+k+ +s+ a+++H +  gH +++e++e
  KHJ33615.1  30 QNALDWLNKNESTTMQEQSVVCESNELSTDMtplkTGEVAKSMVCDDCGKKLRSMMAVQNHNRLSGHENFSESSE 104
                 566667777777777777777777776554411114567779***************************976543 PP

>> DUF4428  Domain of unknown function (DUF4428)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00012      0.31      21      39 ..      72      90 ..      61     101 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00012
     DUF4428 21 yvCkdClkKlseflsdvki 39
                 vC+dC kKl ++++++++
  KHJ33615.1 72 MVCDDCGKKLRSMMAVQNH 90
                69********999888876 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   3.0    0.0069        18       7      34 ..     140     170 ..     135     178 .. 0.79
   2 ?    4.2   0.0     0.014        37       8      39 ..     243     274 ..     236     305 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0069
                 TSEEEEEEEETTSBHHHHHHHHHHHHT...S CS
   ubiquitin   7 dgkkitleveesdtveelKekiaekeg...i 34 
                 ++k+  ++++++++v++ Ke++a++e+   i
  KHJ33615.1 140 QKKNEKIRMKSTKEVQDAKERLAQQEQmkaI 170
                 5667789*******************94444 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.014
                 SEEEEEEEETTSBHHHHHHHHHHHHTSSGGGE CS
   ubiquitin   8 gkkitleveesdtveelKekiaekegipaeqq 39 
                 + ++t +++ ++t+ el ++i+++ g p+ ++
  KHJ33615.1 243 SGTLTKTLPAETTLFELGQQIQAEAGQPVTKF 274
                 44678899999***************999876 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7  16.3   0.00038      0.96     130     234 ..     103     212 ..      20     263 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00038
     DUF4407 130 a......ltaelaeleaqiaalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakldatarlaalraelael 222
                 +       ++e a+  ++++a ++e +a++a +d+++++ ++++  +++++ +  + + +  ++ ka ++++q++l+++ ak + ++r++a+++ + + 
  KHJ33615.1 103 SeeiaplTEEEKAAKLEELRAKSREKKAQQAIIDKQEQKKNEKIRMKSTKEVQDAKERLAQQEQMKAIAKKRQEKLDDIAAKKRIQERISADKEARRK- 200
                 02333335666677777778999999999999999999999999988888877777777777778888888888888888886655555444433333. PP

     DUF4407 223 eaerakeraasq 234
                 +ae++k++++ q
  KHJ33615.1 201 KAEAQKAEREGQ 212
                 344443333333 PP

>> SOBP  Sine oculis-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   9.7    0.0017       4.4      97     254 ..      97     251 ..      32     306 .. 0.41

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0017
        SOBP  97 s..ksaspsssptssnsskplisvassskllaeksqepaslve.aplepkkqrkkkpglrkpkqvkagsskssetkagllqkqqkalplsaeleess.v 191
                 +  +++s +  p  ++++ ++++   + k+  +k q++   ++ +++++k + k++++ +  k++ a++++++   +++ q++ + ++ +++++e +  
  KHJ33615.1  97 EnfSESSEEIAPLTEEEKAAKLEELRA-KSREKKAQQAIIDKQeQKKNEKIRMKSTKEVQDAKERLAQQEQMKAIAKKR-QEKLDDIAAKKRIQERIsA 193
                 233555555555533333333333322.222222222222222022222222233333333333344444444433333.2222233333333333212 PP

        SOBP 192 pkpflrpppsiqelqsslpnqslpkiapppkpp..stlappsngaerppfsplleppksasenpp 254
                  k + r ++++q+        + +++a p +p+  +t++ +s+++  +   +l+ +  +  +  p
  KHJ33615.1 194 DKEARRKKAEAQK-------AEREGQAAPVEPSftRTMTASSQSTATEARLRLQTSSGTLTKTLP 251
                 2222222222222.......111222222221100222222222222222222222223333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3689  (0.205756); expected 358.6 (0.02)
Passed bias filter:                      723  (0.0403257); expected 358.6 (0.02)
Passed Vit filter:                       132  (0.00736237); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.73u 0.26s 00:00:00.99 Elapsed: 00:00:00.40
# Mc/sec: 2297.49
//
Query:       KHJ33616.1  [L=550]
Description: putative transmembrane amino acid transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-68  231.9  38.5    1.3e-68  231.7  38.5    1.0  1  Aa_trans         Transmembrane amino acid transporter protein
  ------ inclusion threshold ------
       0.14   12.1   3.9       0.17   11.9   0.1    3.0  3  Phage_holin_2_1  Bacteriophage P21 holin S


Domain annotation for each model (and alignments):
>> Aa_trans  Transmembrane amino acid transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.7  38.5   1.4e-72   1.3e-68       2     408 ..     147     536 ..     146     537 .. 0.94

  Alignments for each domain:
  == domain 1  score: 231.7 bits;  conditional E-value: 1.4e-72
    Aa_trans   2 tssalsavlnlikaivGaGvLaLPyAfkqlGlivGlillllvallslytlllLvkcsktlasgkrnksYgdlgyrllGpkgkliidlailvqlfGvgvs 100
                 +s+++sa++n++++i GaG+++ PyAf+q+Gl+ G+ill++ +++  +t+ l+v  sk      ++ s + + ++++G+ g +ii+l +  + fG +v+
  KHJ33616.1 147 KSGMRSAFMNMTNSILGAGIIGQPYAFRQAGLLSGIILLIMLTVMVDWTIGLIVINSKL----SGSTSLQGTMKHCFGRTGLIIISLGQWAFAFGGMVA 241
                 6899*****************************************************96....4899999999************************** PP

    Aa_trans 101 yliligdllpaifesffdt.........lllsnvyfilisaliiipLslipnlskLsylSllalvsslyyivilvlvvaelvklelkgvseetvkkask 190
                 + i++gd++p++f  +            l  ++v++++ ++li  pLsl +++skLs++S+la++s+++ i+i+v++ a +v+ e +g+ ++ +  +  
  KHJ33616.1 242 FGIIVGDTIPHVFLALWPGivnvsvlnfLISRRVVITVFVSLISYPLSLYRDISKLSKASTLAFISMMI-ILIAVVSQAPIVPAESRGTLDDSF--FMV 337
                 ***********9988765566668887555588888888899*************************98.8*********************87..666 PP

    Aa_trans 191 lkglflaigiivFAftghavlleiqnelkdpskfkkmtkvlllsiilatvlyilvGlvGYltFGnevkgnillnlpkssilivivnlllvlhlilsfpl 289
                 + g+f+ai++i FA +++++ l i+++lk+p     + +v++ s+ ++++ ++l++l+GY tFG+ ++gn+l+n+p+ +ili++++l+++l+++++ pl
  KHJ33616.1 338 KGGFFQAISVISFALVCQHNSLLIYDSLKTPTL-DRFARVTHYSTGVSMLACLLMALSGYITFGSLTQGNVLNNFPPDNILINLARLCFGLNMLTTLPL 435
                 699****************************99.8899************************************************************* PP

    Aa_trans 290 qlhplrqvvenllikkeavagasekeapkskllrlvirlllvvityliAlsvpslakvlslvGatsstplsfilPalfhlkliktekksleklvkkkil 388
                  ++++r+v+ n               +p++   ++ ++++lv+++++ +l+++ l+ v++l+Ga+s+  l++ilP+l +lkl + ++k++         
  KHJ33616.1 436 EAFVCREVMLNYWLA----------GEPFNIFIHISFTTFLVFSAMMFSLITCDLGVVFELIGAISACGLAYILPPLCYLKLSTRSWKTIPA------- 517
                 *********999854..........67888888***************************************************99855444....... PP

    Aa_trans 389 dlicivlglllvfyglavli 408
                  l+ci++g+l ++++l++++
  KHJ33616.1 518 -LACIIFGFLTMIISLSQTF 536
                 .58**************998 PP

>> Phage_holin_2_1  Bacteriophage P21 holin S
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.2      0.27   2.4e+03      36      52 ..     177     194 ..     172     194 .. 0.75
   2 ?   -3.4   0.1       1.2     1e+04      37      48 ..     467     478 ..     455     480 .. 0.79
   3 ?   11.9   0.1   1.8e-05      0.17      25      52 ..     505     532 ..     490     536 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.27
  Phage_holin_2_1  36 gvlgglv.igllTyltnl 52 
                      g+l+g++ +++lT+++ +
       KHJ33616.1 177 GLLSGIIlLIMLTVMVDW 194
                      788887526788998876 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.2
  Phage_holin_2_1  37 vlgglvigllTy 48 
                      v + +++ l+T+
       KHJ33616.1 467 VFSAMMFSLITC 478
                      778889999997 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 1.8e-05
  Phage_holin_2_1  25 dklspeeWsaigvlgglvigllTyltnl 52 
                       kls   W++i  l+ +++g+lT++++l
       KHJ33616.1 505 LKLSTRSWKTIPALACIIFGFLTMIISL 532
                      58999*******************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (550 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       661  (0.0368676); expected 358.6 (0.02)
Passed bias filter:                      268  (0.0149478); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 4125.08
//
Query:       KHJ33617.1  [L=1217]
Description: hypothetical protein EV44_g1653 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-50  170.0   0.2    1.6e-49  168.5   0.2    1.8  1  RasGEF    RasGEF domain
      1e-14   54.6   0.1    5.8e-14   52.2   0.1    2.4  1  RasGEF_N  RasGEF N-terminal motif
    1.2e-08   34.6   0.0    3.8e-08   33.1   0.0    1.9  2  SH3_9     Variant SH3 domain
    8.3e-07   28.5   0.0    1.9e-06   27.4   0.0    1.7  1  SH3_1     SH3 domain
    0.00094   18.8   0.0     0.0029   17.3   0.0    1.8  2  SH3_2     Variant SH3 domain
     0.0051   16.5   1.6        2.5    7.7   0.0    2.5  2  DUF4672   Domain of unknown function (DUF4672)


Domain annotation for each model (and alignments):
>> RasGEF  RasGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.5   0.2   5.4e-53   1.6e-49       1     176 [.     930    1115 ..     930    1116 .. 0.96

  Alignments for each domain:
  == domain 1  score: 168.5 bits;  conditional E-value: 5.4e-53
      RasGEF    1 elAeqltlieaelfskikpeellgsawsked..rspnveaviarfnrlsnwvaseilseeslkkRakviekfikiakecrklnNfnslmailsaLqs 95  
                  elA+qlt+  +++f++i+peell s+ sk++  ++pnv+a+ a+++ +s++v  +il++e++kkRa +++++ik+a++c +lnN++ ++ai++ ++s
  KHJ33617.1  930 ELARQLTICGMRIFCSIRPEELLASRLSKKSnpDAPNVKAMAAFSTDISQFVWDTILQQEDAKKRATILKHWIKVAQKCLELNNYDCMLAIVCSINS 1026
                  79**************************9995555************************************************************** PP

      RasGEF   96 spvsrLkktweavskkslktleeleelmspennfknyrealkssasskpciPflglyltdltfieegnpdtl.........egk.iNfeKr 176 
                  s++ rLkktweavs+++++++++l +++s+++n +++r++ +++    pc+Pf+g+yltdl f + gn+ t          e+k iNf+K+
  KHJ33617.1 1027 SSIIRLKKTWEAVSQRRKDLFQSLLSIASNDHNRSTLRQRQNNH--APPCLPFIGIYLTDLGFADLGNSPTRplpamgnreEQKvINFDKY 1115
                  *******************************************9..7899*****************888778999999998899****96 PP

>> RasGEF_N  RasGEF N-terminal motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.2   0.1     2e-17   5.8e-14       2     100 ..     753     840 ..     752     851 .. 0.81

  Alignments for each domain:
  == domain 1  score: 52.2 bits;  conditional E-value: 2e-17
    RasGEF_N   2 vkagtlekLierLtskrll.dddfletFLltyrsFttpaeLlekLieryeinppnnlesdesnswnsksssnirlrvlsvlkewvenhyydfsddkall 99 
                 + +g+l +L+erLt ++ + d +f++tF+lt+r F+tp+ + +kLi+r ++  +n+++           s  +r+r+ +v+k w+e h+ + +d    +
  KHJ33617.1 753 IIGGSLSALVERLTLNDSTpDVSFVSTFFLTFRLFVTPEVFASKLIDRSDYAGENSET-----------SHIVRMRIYNVFKNWLEFHWCNSTDYT-AI 839
                 579*************665166**************************9653333332...........2349****************9766654.44 PP

    RasGEF_N 100 s 100
                 s
  KHJ33617.1 840 S 840
                 4 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   0.0   1.3e-11   3.8e-08       1      47 [.      81     134 ..      81     136 .. 0.91
   2 ?   -2.4   0.0       1.5   4.6e+03       2      17 ..     443     458 ..     443     458 .. 0.88

  Alignments for each domain:
  == domain 1  score: 33.1 bits;  conditional E-value: 1.3e-11
       SH3_9   1 Alypyepredd.....eLsLqrGDvitvieesedgWlegs.l.tGrtGlvPany 47 
                 A+yp++p+++       L++++GD+i+v   + +gW +g+ l +G++G++P ny
  KHJ33617.1  81 AIYPFNPTHAPadnavTLEFNEGDIILVHTTHINGWADGTiLtNGERGWLPTNY 134
                 89*****9976679999**********************9558*********** PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.5
       SH3_9   2 lypyepreddeLsLqr 17 
                 +++++p++++ L L+r
  KHJ33617.1 443 ICDHDPQSTQLLLLNR 458
                 689*******999986 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   6.3e-10   1.9e-06       1      48 []      80     132 ..      80     132 .. 0.89

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 6.3e-10
                 EESSSBEXSS.....TTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEEG CS
       SH3_1   1 iAlYDYeaee.....sdELsfkkGDviivleksedgWwkgrlkgtgkeGliPs 48 
                 +A+Y++++++     +  L f++GD+i v+  + +gW +g   ++g++G+ P+
  KHJ33617.1  80 RAIYPFNPTHapadnAVTLEFNEGDIILVHTTHINGWADGTILTNGERGWLPT 132
                 699999999986434457*********************************95 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   9.6e-07    0.0029       8      55 ..      85     136 ..      78     137 .. 0.81
   2 ?   -3.7   0.0       3.4     1e+04       2      16 ..     440     454 ..     440     457 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 9.6e-07
                 B-SCGCCB.....--B-TTEEEEEE..EEEECTTEEEEEE..CCCEEEEEGCGEE CS
       SH3_2   8 yvgedkse.....LsfkkGdvikvlslgskdsdgwwegev..gGrvGlfPsslve 55 
                 ++++  +      L+f +Gd+i v     +  +gw  g+   +G +G+ P+++++
  KHJ33617.1  85 FNPTHAPAdnavtLEFNEGDIILVH---TTHINGWADGTIltNGERGWLPTNYCK 136
                 5555555567788***********9...7777799***8889**********975 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 3.4
                 EEESS-B-SCGCCB- CS
       SH3_2   2 vraiedyvgedkseL 16 
                 ++ i+d++++++ +L
  KHJ33617.1 440 IKIICDHDPQSTQLL 454
                 6889******99986 PP

>> DUF4672  Domain of unknown function (DUF4672)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   1.1    0.0018       5.5      50     139 ..     632     725 ..     624     736 .. 0.69
   2 !    7.7   0.0   0.00083       2.5      69     116 ..     916     963 ..     873     983 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0018
     DUF4672  50 appqseedevvdkk..ltllsaqednpdllkedrlqskqdegacvmhqecqiqsce.lsvaqesgpssPa.vtslasPPlcfsgflscvcqtfs 139
                 +p  +e +++ d+   lt ls+q+dn ++  + +  s  +eg+ +m+     +s+  ++  + +++++P    s++   + +s    c +q++s
  KHJ33617.1 632 VPITTESNNITDDLlpLTTLSTQDDNSEVSLKKKSISTTNEGCNIMYLSSLRNSDTsMTSMNSTRATTPDqGLSVTQSQISYSEISLCSSQSLS 725
                 5666777777776422689****************************87544444313333334444453135666666666666666666655 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00083
     DUF4672  69 aqednpdllkedrlqskqdegacvmhqecqiqscelsvaqesgpssPa 116
                   e np +l+ d l   ++ ++c m   c i+++el +++ s+ s P 
  KHJ33617.1 916 SGECNPTILDFDPLELARQLTICGMRIFCSIRPEELLASRLSKKSNPD 963
                 45778999999999999*******************998776666653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.75u 0.28s 00:00:01.03 Elapsed: 00:00:00.44
# Mc/sec: 8242.48
//
Query:       KHJ33618.1  [L=313]
Description: putative nuclear envelope protein cut8 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.4e-76  254.7   0.0    1.1e-75  254.4   0.0    1.1  1  Cut8      Cut8, nuclear proteasome tether protein


Domain annotation for each model (and alignments):
>> Cut8  Cut8, nuclear proteasome tether protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  254.4   0.0   5.9e-80   1.1e-75       2     240 ..      44     277 ..      41     278 .. 0.94

  Alignments for each domain:
  == domain 1  score: 254.4 bits;  conditional E-value: 5.9e-80
        Cut8   2 rkRkrlsledeeesqdsedetspskkkskpslss....sskkrsrtpkisgqpLplsrlLetLdkeqLqsllqslveehpeleqevskkapkpsiesll 96 
                 rkRk+     +++++d  + +s s+++s p++ +    +++k+ + ++isg +L+++rl etLd ++L+++lq+++e+hp++ +ev + ap+ps+e ++
  KHJ33618.1  44 RKRKA-----ADDDAD--SGMSISPTNSPPAFAPrslfRPQKKIKASNISGHSLSTHRLFETLDASSLRTVLQTICERHPDISSEVISLAPRPSVEAAI 135
                 45555.....333333..469999****9999998888778********************************************************** PP

        Cut8  97 elLkekkenilkslPykgdkeddyaYlRvkphLleFlncLsDfilnflppnetnlstsLkfldeatklvhkLPnfdnqshnyykdkcyeqlsnawltvi 195
                 e+L+ ++e++++++Py+g+  +dya++Rvk+hL+++++++ +f++++lpp e++++ sL+fld atk++h+LP+++++s+++yk+++y+++++aw++v+
  KHJ33618.1 136 EVLSGYQERLQAAFPYGGNPGSDYAFNRVKQHLTNLIDAVTEFTPHYLPPSEDQTTISLSFLDFATKVIHDLPEWESNSNQHYKENAYDEITRAWVLVV 234
                 *************************************************************************************************** PP

        Cut8 196 keaakdgggllkkleleeweekLkkhneesegklqkvlellkskl 240
                 +ea+k+ggg+  +++ ++w++ L khne+s+g++++++ +l s+l
  KHJ33618.1 235 SEASKRGGGF--QIHAGGWDQILTKHNEQSRGRMESAVRALGSHL 277
                 *********9..****************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2344.23
//
Query:       KHJ33619.1  [L=765]
Description: putative 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   5.1e-152  505.8   0.0   5.5e-147  489.2   0.0    2.3  2  Meth_synt_2  Cobalamin-independent synthase, Catalytic domain
   4.4e-112  374.6   0.0   1.4e-104  350.0   0.0    3.0  3  Meth_synt_1  Cobalamin-independent synthase, N-terminal domai
     0.0081   15.3   0.0      0.017   14.3   0.0    1.6  1  URO-D        Uroporphyrinogen decarboxylase (URO-D)
     0.0093   15.8   0.1        6.6    6.7   0.0    2.6  2  VbhA         Antitoxin VbhA
  ------ inclusion threshold ------
      0.049   13.9   0.3       0.12   12.6   0.3    1.6  1  Spore_GerAC  Spore germination B3/ GerAC like, C-terminal


Domain annotation for each model (and alignments):
>> Meth_synt_2  Cobalamin-independent synthase, Catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   5.2e-06     0.019     126     191 ..     159     226 ..     136     232 .. 0.74
   2 !  489.2   0.0  1.5e-150  5.5e-147       1     323 [.     435     758 ..     435     759 .. 1.00

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5.2e-06
                  EEE-HHHHHHTSEE-TTS-HH..HHHHHHHHHHHHHHHHHHHTT-SEEEEE-TTSSTT--SSGGGHHH CS
  Meth_synt_2 126 lltGpvtilnwsfvrddvdra..eaaaqialalrdevkdLeaaGikviQiDepalreGlplkkadwaa 191
                  ++ Gp++ l+ +    d++    + + ++ l+ +d + +L+a G++ +QiDep l + lp k+++  +
   KHJ33619.1 159 VIVGPISFLHLGKADRDQSVVpiDLIDKVFLVYQDLLMKLKAVGAQNVQIDEPILVQDLPEKVKSSFK 226
                  46677777777776666665411456678899999999***********************9976654 PP

  == domain 2  score: 489.2 bits;  conditional E-value: 1.5e-150
                  S-BB--SB---SS-----------------HHHHHHHHHHHHHHHHHHTT--SCBE-B-TT-SSTTHHHHTTSTTEE--SS--EEEETTEEE---EE- CS
  Meth_synt_2   1 lpTttiGSfPqtaevrearaevkkgelseeeyekaireeiekvvrrqeelgvDvlvhgepeRgdmveyfgealdgfaftkngwvqsygsrcvrppiiv 98 
                  +pTttiGSfPqt+e+r  r+++ +ge++ eeyek+i++eiek v+ qeel++DvlvhgepeR+dmv+yfge+l+g+aft++gwvqsygsrcvrppiiv
   KHJ33619.1 435 FPTTTIGSFPQTSEIRVQRNKFTRGEITSEEYEKFIESEIEKTVKIQEELDLDVLVHGEPERNDMVQYFGERLEGYAFTTHGWVQSYGSRCVRPPIIV 532
                  8************************************************************************************************* PP

                  SS---SS-SSTHHHHHHTTS-SS-BEEEEE-HHHHHHTSEE-TTS-HHHHHHHHHHHHHHHHHHHHHTT-SEEEEE-TTSSTT--SSG.GGHHHHHHH CS
  Meth_synt_2  99 gdvsrpaamtvkesalaqsltdkpvkglltGpvtilnwsfvrddvdraeaaaqialalrdevkdLeaaGikviQiDepalreGlplkk.adwaayldw 195
                  gd+srpa+mtvkes++a s+ +kp+kg+ltGp+t+l+wsf rddv+++ +a q+alalrdev dLeaaG+ viQ+DepalreGlpl+  ++++ayl+w
   KHJ33619.1 533 GDISRPAPMTVKESKYAVSISKKPMKGMLTGPITCLRWSFTRDDVHQSMQAEQLALALRDEVIDLEAAGVYVIQVDEPALREGLPLRAgKEREAYLKW 630
                  ****************************************************************************************99******** PP

                  HHHHHHHHHTTS-TTSEEEEEES-S--CCCHHHHHTT--SEEEESBSSS-SSGGGGTTTT---SEEEEBSS-TTSSS--THHHHHHHHHCHHCTS-ST CS
  Meth_synt_2 196 aveafrldtiaaaddtqvhtHlCyselndilsaiaaldvDvitieasrsdeellealeevkygrgvglGvydihsprvpsmeeiaalikkaldvapke 293
                  ave+frl+ ++++d+tq+h+H+Cyse++d  +aiaald+Dv++ie+s+sd +ll+++++  y+r++g+Gvydihsprvps  ei+++i+++l+ ++ +
   KHJ33619.1 631 AVESFRLSVSGVQDSTQIHSHFCYSEFQDFFHAIAALDADVLSIENSKSDAKLLKVFVDEAYPRHIGPGVYDIHSPRVPSEHEIRERIQEMLQFLRPD 728
                  ************************************************************************************************** PP

                  SB-BB-SS-STTS-HHHHHHHHHHHHHHHH CS
  Meth_synt_2 294 rlwvnPdCGLktrkreearaalknmvdaAk 323
                  +lw++PdCGLktrk++e++aal nmv+aAk
   KHJ33619.1 729 QLWIDPDCGLKTRKWPETKAALVNMVNAAK 758
                  *****************************8 PP

>> Meth_synt_1  Cobalamin-independent synthase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  350.0   0.0  3.8e-108  1.4e-104       2     307 ..       4     313 ..       3     319 .. 0.95
   2 ?    1.3   0.0     0.056     2e+02      14      59 ..     447     492 ..     437     500 .. 0.86
   3 !   19.5   0.0   1.6e-07   0.00056     147     264 ..     554     678 ..     536     696 .. 0.67

  Alignments for each domain:
  == domain 1  score: 350.0 bits;  conditional E-value: 3.8e-108
                  EB-S---SSTTTTHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHHHCTT-SBEEES---SS-HHHHHHHHTT---GGGTT.SSSSSHHHHHHHHHS CS
  Meth_synt_1   2 ssilGfPriGekRelkkalesywkgkiseeeLektakeLrakhwkkqkeagidlipvndfslYDhvLdtavllgaiPerfkleekkeeldtyFalaRG 99 
                  ssilGfPr+G +R+lkka+e+yw gkis+++L+++ak+Lr+ hwk+qk+ag+d+ip+ndf+lYD+vL     +ga P r+++ ++ +++d+yFa++RG
   KHJ33619.1   4 SSILGFPRMGVNRDLKKATEAYWGGKISQDDLLAEAKRLRLVHWKIQKDAGVDIIPSNDFALYDQVLHQIQDFGATPPRYTN-HGLNRVDEYFAMGRG 100
                  79******************************************************************************87.899************ PP

                  C....TTCT--EEEESTTSS-EEEE-BE-SS.----S.-THHHHHHHHHHHTTGGEEEEEE-HHHHHHT-EETTCC..-HCHHHHHHHHHHHHHHHHH CS
  Meth_synt_1 100 k....kdvaalemtkwFntnYHYlvPelekdtefkla.seklleevkeakalgieakpvllGpltflkLskakeek.veklellekLlpvYkelleeL 191
                  +     dv++lem+kwF++nYHY++P++++++efkl  + k++e++ eaka+gi ++pv++Gp++fl+L+ka++++ v +++l++k++ vY++ll +L
   KHJ33619.1 101 HqkdgIDVPSLEMVKWFDSNYHYVKPTFQDNQEFKLYsNPKAVEDFLEAKAAGIVTRPVIVGPISFLHLGKADRDQsVVPIDLIDKVFLVYQDLLMKL 198
                  *8888899***************************974679******************************99887799******************* PP

                  HHTT-SEEEEE-GGGGSSGCHHHHHHHHHHHHHHTC.CTTTSEEEEE--SS-.CCHHHHHTTSSTSEEEEETSSHCHHHHHHHHCTT.TTSEEEEEEE CS
  Meth_synt_1 192 keagvewvqidEPalvldlekeelealkeaYeelak.ekkelklllatyFdsvaealellaelpveglglDlvraeenlealkkaglpedkvLsaGvi 288
                  k+ g++ vqidEP+lv dl+++ ++++k +Ye++ +  ++ ++l+l+tyF+++ ++l++l   ++ +l++Dlvr++e+l  +++ ++  +++LsaGv+
   KHJ33619.1 199 KAVGAQNVQIDEPILVQDLPEKVKSSFKPIYEKFFSlGDQIPNLVLTTYFGDIVHNLDAL-PQNLYALHIDLVRNPEQLGPVAS-TIGPKTILSAGVV 294
                  ********************************98751567789****************9.7799******************9.999********** PP

                  -SSS-B---HHHHHHHHHH CS
  Meth_synt_1 289 dGrniWradlekalellee 307
                  dGrniW+++++ka+e++e+
   KHJ33619.1 295 DGRNIWKTNFQKAIEIVEA 313
                  ***************9986 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.056
                  THHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHHHCTT-SBEEES CS
  Meth_synt_1  14 RelkkalesywkgkiseeeLektakeLrakhwkkqkeagidlipvn 59 
                   e++   +++ +g+i++ee ek  ++  +k++k+q+e ++d+   +
   KHJ33619.1 447 SEIRVQRNKFTRGEITSEEYEKFIESEIEKTVKIQEELDLDVLVHG 492
                  57888999********************************997765 PP

  == domain 3  score: 19.5 bits;  conditional E-value: 1.6e-07
                  TGGEEEEEE-HHHHHHT-EETTCC.-HCHHHHHHHHHHHHHHHHHHHTT-SEEEEE-GGGGSSG....CHHHHHHHHHHHHHHT....CCTTTSEEEE CS
  Meth_synt_1 147 gieakpvllGpltflkLskakeekveklellekLlpvYkelleeLkeagvewvqidEPalvldl....ekeelealkeaYeela....kekkelklll 236
                     +k +l Gp+t l  s ++++  ++    e+L  + ++ + +L++agv ++q+dEPal   l     ke+ + lk a e+++      ++++++  
   KHJ33619.1 554 KKPMKGMLTGPITCLRWSFTRDDV-HQSMQAEQLALALRDEVIDLEAAGVYVIQVDEPALREGLplraGKEREAYLKWAVESFRlsvsGVQDSTQIHS 650
                  3456789************99988.7777889998888888889***************987773332233333333344433322223344445555 PP

                  E--SS-.CCHHHHHTTSSTSEEEEETSS CS
  Meth_synt_1 237 atyFdsvaealellaelpveglglDlvr 264
                  +  + ++++ ++++a+l+ + l+++  +
   KHJ33619.1 651 HFCYSEFQDFFHAIAALDADVLSIENSK 678
                  5556667777777777777776666555 PP

>> URO-D  Uroporphyrinogen decarboxylase (URO-D)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   4.8e-06     0.017     196     344 ..     600     755 ..     562     757 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 4.8e-06
                 TT-SEEEEEE.TTGGGS-HHH......HHHHTHHHHHHHHHHHHH.H--S-EEEEESSHH.HHHHHHTTS--SEEE--TTS-HHHHHH....SS....E CS
       URO-D 196 agAdaiqifD.swagllsped......feefvlpylkrivdevkaegpkvpvilfikgagaeiledlaelgadvlsldwtvdlkeaar....evgdkva 283
                 ag+ +iq+ + +  + l+ +       + +++++  +  v++v++ ++     +f+  + + +++++a l+advls++++ + ++  +    e + + +
  KHJ33619.1 600 AGVYVIQVDEpALREGLPLRAgkereaYLKWAVESFRLSVSGVQDSTQ--IHSHFCYSEFQDFFHAIAALDADVLSIENSKSDAKLLKvfvdEAYPRHI 696
                 556666666665555554333222233999999999999999999876..566666666777*******************888888899987778888 PP

                 EE--B-G.GGGG.S-HHHHHHHHHHHHT.T---SSSEEB-BSS---TTS-HHHHHHHHHHHH CS
       URO-D 284 lqGnldPialLl.gspeeiekevkeilekgaggkkgyilnlGhgippetppenvkalveavk 344
                   G  d +      s+ ei+++++e+l+    ++ + ++ + +g+     pe+ +alv+ v+
  KHJ33619.1 697 GPGVYDIH-SPRvPSEHEIRERIQEMLQF--LRPDQLWIDPDCGLKTRKWPETKAALVNMVN 755
                 89999995.6666***************5..6799***********************9997 PP

>> VbhA  Antitoxin VbhA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0018       6.6      19      46 ..      14      41 ..      12      41 .. 0.92
   2 !    6.3   0.0    0.0025       8.8      28      40 ..     454     466 ..     446     468 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0018
        VbhA 19 psaetvadleayvrGeIdadElvrrvra 46
                ++++++ ++eay  G+I+ d+l++++++
  KHJ33619.1 14 VNRDLKKATEAYWGGKISQDDLLAEAKR 41
                7899********************9985 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0025
        VbhA  28 eayvrGeIdadEl 40 
                 ++++rGeI+++E+
  KHJ33619.1 454 NKFTRGEITSEEY 466
                 6899********9 PP

>> Spore_GerAC  Spore germination B3/ GerAC like, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.3   3.2e-05      0.12      48     126 ..     398     493 ..     355     511 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.2e-05
                  EEEEEEE.EEEEEEE-SSSEEEEEEEEEEEE.EE..........-....----.-----HHHH.............HHHHHHHHHHHHHHHHHHHHTT CS
  Spore_GerAC  48 sveissskskikvkiengkpsfdikiklegd.ie..........e....skknlleeeelkel.............ekalekeiekeieealkklqey 117
                  + ++++++sk+ +++ n k +f i ik++ + ++          +    s           e+              ++ ek ie+eie+++k + e+
   KHJ33619.1 398 NPQVKERQSKVVPEMYNRKSEFPIRIKAQQKsLNlplfptttigSfpqtS-----------EIrvqrnkftrgeitSEEYEKFIESEIEKTVKIQEEL 484
                  3456778888*******************996668777655443133222...........22222223344445789999999999999***999** PP

                  ----S-HHH CS
  Spore_GerAC 118 ksDilgfge 126
                  + D+l  ge
   KHJ33619.1 485 DLDVLVHGE 493
                  ****97666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (765 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       575  (0.0320709); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 5289.81
//
Query:       KHJ33620.1  [L=401]
Description: putative aspartate cytoplasmic [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.3e-89  299.6   0.0    3.7e-89  299.4   0.0    1.0  1  Aminotran_1_2  Aminotransferase class I and II
  ------ inclusion threshold ------
       0.14   11.3   0.0       0.22   10.6   0.0    1.3  1  CoA_transf_3   CoA-transferase family III


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  299.4   0.0   4.1e-93   3.7e-89       2     363 .]      31     396 ..      30     396 .. 0.98

  Alignments for each domain:
  == domain 1  score: 299.4 bits;  conditional E-value: 4.1e-93
                    EEEESSSSSTTSTTSS.HHHHHHHHHHHHHHHHHTSTTST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-E. CS
  Aminotran_1_2   2 dvinLgsneylgdsgk.ptlpevakaekegalaggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgde. 95 
                    ++inLg+++y++d+gk + lp+v+ ae + + +++ ++ey  i+g  e+ +a a ++  s+ ++l+r a  + +sG+gal+   +fl ++ pg + 
     KHJ33620.1  31 EKINLGVGAYRDDKGKpYILPSVKLAESR-IISSNLNKEYAGITGVGEFTKAAAILAYGSNSTALDRVAITQSISGTGALRIGGAFLERFYPGAKk 125
                    79***************************.***********************************************************9999766 PP

                    EEEEESS-THHHHHHHHTTSEEEEEEBEETTTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTT CS
  Aminotran_1_2  96 ilvpdptyasyknilrlsggevvryplyseedfhldlealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYa 191
                    i++p+p++a++  +++ sg+ v +y++y++++ +ld+e+l+e++k+ap+g++   ++l++++hNPtG+++t e+++++ + + + n++ f+D+aY+
     KHJ33620.1 126 IYIPTPSWANHAAVFKDSGLVVEKYRYYNKDTIGLDFEGLIEDIKNAPKGSI---FLLHTCAHNPTGVDPTSEQWKEISSAISASNHFSFFDMAYQ 218
                    ****************************************************...***************************************** PP

                    TCBSSSS..HTHHHHGGSTTSTTEEEEEESSSTTSSGGG-EEEEEEEH.......HHHHHHHHHHHHHTS..SHHHHHHHHHHHHHHHHHHH...H CS
  Aminotran_1_2 192 gfvfgsl..davatranveeepnllivgslsKafGlaGeRvGyilgna.......avvsqlrklsrpfls..ssllqaavaaalsdallkqs...e 273
                    gf++g++  da ++r++v+e+ n+++++s++K++Gl+GeRvG++++++       +v sq+++l+rp++s  + ++++++a++l +++l  +   e
     KHJ33620.1 219 GFASGDTdkDAFPVRHFVSEGHNICLAQSFAKNMGLYGERVGAFSIVCadseekkRVESQIKILVRPLYSnpPIHGARIAAEILGNKELNSQwlrE 314
                    ******99999999********************************999***************************************9999**** PP

                    HHHHHHHHHHHHHHHHHHHHHS....TEEEECCSCSSEEEEEETHHCHHHHHHH..HHHTCTEEEEEGGGGTSTTEEEEECTTS-HHHHHHHHHHH CS
  Aminotran_1_2 274 leemrqrlqkrrkelrdeLael....glkvlasqsgmflltdlsaetakelskk..LleevgvyvtpgtsftvpgrlRitvAglteeeleelveal 363
                    l++m++r++++rk l+deL++l    +++++++q+gmf +t+l++       ++  L++e+ vy t+        ++Ri+vAg t+ ++++l+ a+
     KHJ33620.1 315 LKAMADRIITMRKLLKDELEALgskyDWSHITNQIGMFAYTGLTPD------QMerLAKEYSVYATK--------DGRISVAGITTGNVKRLAAAI 396
                    *******************999************************......5555***********........******************987 PP

>> CoA_transf_3  CoA-transferase family III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   2.5e-05      0.22     223     258 ..     361     396 ..     340     400 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 2.5e-05
  CoA_transf_3 223 nrdpaaapygvyrtkdgwvaiaaatdkqwaalckal 258
                   + ++ a+ y+vy+tkdg++++a  t  ++++l++a+
    KHJ33620.1 361 QMERLAKEYSVYATKDGRISVAGITTGNVKRLAAAI 396
                   44556778************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2850.78
//
Query:       KHJ33621.1  [L=604]
Description: putative bgh specific protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.42   10.6   3.4       0.22   11.5   0.2    2.3  2  HLH       Helix-loop-helix DNA-binding domain


Domain annotation for each model (and alignments):
>> HLH  Helix-loop-helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.4      0.65   1.2e+04      10      19 ..     101     110 ..      99     112 .. 0.81
   2 ?   11.5   0.2   1.2e-05      0.22       8      29 ..     178     212 ..     171     236 .. 0.67

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 0.65
                 HHHHHHHHHH CS
         HLH  10 rrRRdriNsa 19 
                 r RR+ +N+ 
  KHJ33621.1 101 RIRRRLMNNQ 110
                 7899999986 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 1.2e-05
                 HHHHHHHHHHHHHHHHHHCST................C CS
         HLH   8 rErrRRdriNsaleeLrellP................s 29 
                 +++    r+N+++++Lr+ +P                +
  KHJ33621.1 178 IDKS---RLNTSIARLRSAVPptgsstptlpgaskasT 212
                 5554...69************99998887777666652 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (604 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1620  (0.0903564); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.46
# Mc/sec: 3951.20
//
Query:       KHJ33622.1  [L=815]
Description: hypothetical protein EV44_g5295 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (815 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1186  (0.0661498); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.24s 00:00:00.89 Elapsed: 00:00:00.41
# Mc/sec: 6006.76
//
Query:       KHJ33623.1  [L=275]
Description: putative enoyl- hydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-54  183.9   0.0    4.3e-54  183.5   0.0    1.0  1  ECH_1     Enoyl-CoA hydratase/isomerase
    5.8e-27   95.1   0.1    3.2e-25   89.3   0.0    2.2  2  ECH_2     Enoyl-CoA hydratase/isomerase
  ------ inclusion threshold ------
      0.067   13.1   0.0      0.093   12.6   0.0    1.2  1  DoxD      TQO small subunit DoxD


Domain annotation for each model (and alignments):
>> ECH_1  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.5   0.0   7.1e-58   4.3e-54       5     248 ..      23     270 ..      20     272 .. 0.91

  Alignments for each domain:
  == domain 1  score: 183.5 bits;  conditional E-value: 7.1e-58
                 TEEEEEE--CGCTTEE-HHHHHHHHHHHHHHHHSTTECEEEEEEBTSEEEEEB-HHHHHHHHC....HHHHHHHCCHHHHHHHHHHSSSEEEEEE-SEE CS
       ECH_1   5 gvaviklnrPeavNalsaelltEliqalekleddksvravvLtGgdkaFaaGadlkemaeeek....akqallkeevlelwtklytvpkpviaavnGaa 99 
                 +++++ ++rP+ +Nal  +  + l   ++ +++++s+ ++++tG + aF+aGadlke  ++ +      +++++  +  l +  +  +kp+iaavnG +
  KHJ33623.1  23 SILLVMIDRPKSLNALRITDHFALDSIFNWFDTEPSLNVAIITGNGPAFCAGADLKEWKQNIEsggsVIDTSPRTGFGGLSR--RVGKKPIIAAVNGIC 119
                 7999******************************************************998773332334444444444444..4589*********** PP

                 ETHHHHHHHHSSEEEEETTTEEE-GGGGGTS--CTTCHHHHHHHHHHHHHHHHHHHT-EEEHHHHHHCTSSSEEESGGGHHHHHHHHHHHHHHSCHHHH CS
       ECH_1 100 igGGlelalacDiviaadnasfglnelklGlipgaggtqilarkvGkskAeeilllgkkisaqealkvGlvdkvvpeeqlleealelaeklaekspaal 198
                  gGG+e+++ +D+via++ a+f+l+e+k+G+ + ag+ ++l+r+vG+++A+ei+l+g+ +sa+e  ++G+v++vv + + + eal +a+ + ++sp+++
  KHJ33623.1 120 YGGGFEMVINADLVIADEAAQFALPEVKIGVAAIAGALPRLVRTVGRQRAMEICLTGRTLSAAEIREWGIVNTVVKNGECVAEALRMAQLICQNSPDSV 218
                 *************************************************************************************************** PP

                 HHHHHHHHHHHH..HHHHHHHHHHHHHHHHHCTSHHHHHHHHHHHTCSH--- CS
       ECH_1 199 rqlkealnakle..dalaeqleaeaklfestfskddikeGlqaflEkrkpef 248
                    ke +n   e  +a++    + +  f  + + +++ eG+++flEkr+p +
  KHJ33623.1 219 ICSKEGINLGWEnvSAEEGTKSLIRGTFMRMNNGKNMAEGVKSFLEKRNPVW 270
                 ***********9544555556677899***********************99 PP

>> ECH_2  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.3   0.0   5.4e-29   3.2e-25       3     179 ..      26     201 ..      24     226 .. 0.87
   2 !    5.2   0.0    0.0021        12     249     322 ..     203     275 .]     195     275 .] 0.78

  Alignments for each domain:
  == domain 1  score: 89.3 bits;  conditional E-value: 5.4e-29
                 EEEE--GGGTT-B-HHHHHHHHHHHHHHCC-TT-SEEEEEESSSSECE--B--HHHHHHHHCS-THHHHHHHHHHH.HHHHHHC-SS-EEEEE-BEEET CS
       ECH_2   3 vitLnrpkalNaLslemvralkealkewekddevklvvlkgagekafCAGgDvralyeaakegkkeeeeffreeYk.lnyliatypkpvvalmdGivmG 100
                 +++++rpk+lNaL  +   al+++++ ++++++ ++ +++g+g  afCAG D+++  +++++g +  ++  r+ +  l  ++   +kp++a ++Gi+ G
  KHJ33623.1  26 LVMIDRPKSLNALRITDHFALDSIFNWFDTEPSLNVAIITGNG-PAFCAGADLKEWKQNIESGGSVIDTSPRTGFGgLSRRV--GKKPIIAAVNGICYG 121
                 6789*************************************98.8*****************97554555666664155555..479************ PP

                 HHHHHHTTSSEEEE-TT-EEE--GGGGT----TTHHHHHHCSST.THHHHHHHH---B-HHHHHHTTS--EE--GGGHHH CS
       ECH_2 101 gGvGlsvhgsfrvvtertvfAmPEtaIGlfPDvGgsyfLsrlpg.elGlylalTGarlkgadalaaglathyvpseklea 179
                 gG  + +++ + ++ e ++fA PE++IG+    G+   L r+ g + ++ ++lTG++l++a++ + g+ + +v++ +  a
  KHJ33623.1 122 GGFEMVINADLVIADEAAQFALPEVKIGVAAIAGALPRLVRTVGrQRAMEICLTGRTLSAAEIREWGIVNTVVKNGECVA 201
                 ************************************999998665889*************************9987643 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0021
                 HHHHHHHHHHS-HHHHHHHHHHHHHHTTT--HHHHHHHHHHHHHHHHHH.SSHHHHHHHHTTS-------SSSSG CS
       ECH_2 249 akktletlkkrsPtslkvtleqlrrgrklsslaevlrmElrlalrllae.kDfveGvrallvdkdkkPkWkpatl 322
                 a ++++ + ++sP s+ ++ e ++ g +  s +e  +  +r +   +++ k+++eGv++ l +  ++P W p++l
  KHJ33623.1 203 ALRMAQLICQNSPDSVICSKEGINLGWENVSAEEGTKSLIRGTFMRMNNgKNMAEGVKSFLEK--RNPVWIPSKL 275
                 55678889999999999999999999888778887777777665555545********99844..69***99875 PP

>> DoxD  TQO small subunit DoxD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.6e-05     0.093      45     121 ..     115     191 ..     103     222 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.6e-05
        DoxD  45 pqasiikdlleivvlnrsllvtalvlftlvEiivGlllliGlltRlsslvafalalgialsayWlgstcedEyqigl 121
                  +++   + +e+v+    +  ++   f+l E+ +G+  + G l Rl+ +v  + a+ i l+   l ++ + E++i  
  KHJ33623.1 115 VNGICYGGGFEMVINADLVIADEAAQFALPEVKIGVAAIAGALPRLVRTVGRQRAMEICLTGRTLSAAEIREWGIVN 191
                 55555666678999999999999999************************************************954 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       270  (0.0150594); expected 358.6 (0.02)
Passed bias filter:                      254  (0.014167); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.45u 0.21s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2187.59
//
Query:       KHJ33624.1  [L=76]
Description: hypothetical protein EV44_g3838 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   12.8   0.0       0.13   12.7   0.0    1.1  1  ACP_PD    Acyl carrier protein phosphodiesterase


Domain annotation for each model (and alignments):
>> ACP_PD  Acyl carrier protein phosphodiesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   7.4e-06      0.13      32      73 ..      25      67 ..       7      74 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 7.4e-06
      ACP_PD 32 eealPerlqrllprmieedwLesYaelegieralqrma.rrlk 73
                +   Pe+++r+ +++ +e wLe+++    +er++ + + +r+k
  KHJ33624.1 25 MMNSPEDISRITKWIQKEGWLEQFRLSIEVERVVGQRQeERTK 67
                5678**********************99999999888777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.18s 00:00:00.54 Elapsed: 00:00:00.33
# Mc/sec: 684.76
//
Query:       KHJ33625.1  [L=601]
Description: putative s-adenosylmethionine-dependent methyltransferase superfamily domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.3e-77  257.2   0.0    1.5e-76  256.5   0.0    1.3  1  Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
    4.5e-09   36.7   0.2    1.3e-08   35.2   0.0    1.9  2  Methyltr_RsmF_N  N-terminal domain of 16S rRNA methyltransfer
  ------ inclusion threshold ------
       0.01   15.7   0.1       0.21   11.4   0.0    2.4  2  Methyltransf_31  Methyltransferase domain
      0.011   14.9   0.3      0.027   13.6   0.0    1.7  2  Fibrillarin      Fibrillarin
      0.093   13.0   0.0       0.18   12.1   0.0    1.4  1  DUF2431          Domain of unknown function (DUF2431)


Domain annotation for each model (and alignments):
>> Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  256.5   0.0   4.2e-80   1.5e-76       1     200 []     372     581 ..     372     581 .. 0.93

  Alignments for each domain:
  == domain 1  score: 256.5 bits;  conditional E-value: 4.2e-80
                      HHHH---TT-EEEESS-TTSHHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CTCCHHHHCC..EEEEEEEE--CCGGG CS
  Methyltr_RsmB-F   1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDaPCsgtgv 94 
                      +++Lapqe+e+ilD++aaPGgKTthia+l+kn+g+++A+d nk R+k ++ n++r+g +n+ v++ Dar ++kv+gg  fDr+LlDaPCsgtgv
       KHJ33625.1 372 VMALAPQENERILDMAAAPGGKTTHIAALIKNTGCIFANDSNKARAKGLIGNIHRMGAKNVVVCNHDARSFPKVIGG--FDRVLLDAPCSGTGV 463
                      589*************************************************************************9..*************** PP

                      TTT-TCHHHH--HHHHHHHHHHHHHHHHHHCCCE....EEEEEEEEEES--STTTTHHHHHHHHHH-TTEEEESSBST.TSTTSSECEEC.... CS
  Methyltr_RsmB-F  95 irrdpdvklrrkekdiaqlaklqkellsaaidll....kkgGvlvYsTCsvlveEneevieeaLkkredvelvetels.epkglklgeea.... 179
                      i +dp+vk+++++ d+ +l +lqk+ll aaid++    k+gG++vYsTCsv+veEne v+++aLkkr++++lv+t l  + +g +  +++    
       KHJ33625.1 464 IAKDPSVKTNKDNIDFLKLPHLQKQLLLAAIDSVdhgsKTGGYIVYSTCSVTVEENEGVVQYALKKRPNIKLVDTGLVfGREGFTAYRGKkfda 557
                      **************************************************************************97641333433333335688 PP

                      ...TSEEE-TTTTSS-SEEEEEEE CS
  Methyltr_RsmB-F 180 ...gtlrllPhtenkdgffiaklk 200
                          t+r++Ph +n dgff+ak++
       KHJ33625.1 558 kmsMTRRYYPHVHNLDGFFVAKFR 581
                      88889*****************96 PP

>> Methyltr_RsmF_N  N-terminal domain of 16S rRNA methyltransferase RsmF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.2       3.9   1.4e+04      20      39 ..      42      63 ..      25      75 .. 0.49
   2 !   35.2   0.0   3.6e-12   1.3e-08      15      89 ..     289     368 ..     278     369 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 3.9
                     HHHHH..H-----EEE--TTS. CS
  Methyltr_RsmF_N 20 flaal..eeprkkglRvNtlKi 39
                     f +    +e++kk ++ ++ Ki
       KHJ33625.1 42 FKKKRrkSEETKKVFKKDEKKI 63
                     3332222333344444444444 PP

  == domain 2  score: 35.2 bits;  conditional E-value: 3.6e-12
                      G.GHHHHHHHHH-----EEE--TTS..TTHHHHHHH..-SS--B-.TT-TTEEES---....TTSHHHHTTS-EE--TTT CS
  Methyltr_RsmF_N  15 e.eaeaflaaleeprkkglRvNtlKisveeleklse..efelepv.pwceeGfyleeeerp.gkhplheaGlyYiQEpSa 89 
                        ea af++a e+pr++ +R+NtlK+++++l++     +++lepv  w++ G  + e++ p g +p++ aG y +Q +S+
       KHJ33625.1 289 VkEAFAFFEANESPRPVVIRTNTLKTHRRDLAQSLMnrGVTLEPVgKWSKVGLQIFESNVPlGATPEYLAGHYILQAASS 368
                      448999***********************9998655589******77******999988777*****************8 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.062   2.2e+02      53     129 ..     199     273 ..     187     302 .. 0.65
   2 ?   11.4   0.0   5.8e-05      0.21       2     113 ..     378     513 ..     377     555 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.062
  Methyltransf_31  53 ldnveFeqgdiee.leklledekfDlilsnevl.naladpdkileeiervlkpggilliedprllaelp.akveeeskay 129
                         +e++++ i++ +e+    +  D++ ++++l  +l  + + + e +rvl++ + l+   ++  ae++ + +++ +++y
       KHJ33625.1 199 QADAELKEAAIQTnIEE----DIPDVLSDKALLaPDLQLLRSRITETIRVLENFSKLAQKGCS-RAEYIsQLLKDICTYY 273
                      44555555555555553....566888888777856666666666667777777776666666.4444447777778876 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 5.8e-05
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldnveFeqgdieeleklledekfDlilsnevl........... 84 
                      +++ r+lD +++ G +t  +a ++   + ++  D ++   +    n  + g +nv ++  d+ +++k +    fD +l ++++           
       KHJ33625.1 378 QENERILDMAAAPGGKTTHIAALIKNTGCIFANDSNKARAKGLIGNIHRMGAKNVVVCNHDARSFPKVI--GGFDRVLLDAPCsgtgviakdps 469
                      6799***************9988878899*************************************863..57******966655554455555 PP

  Methyltransf_31  85 ..........naladpdkile..............eiervlkpggilliedpr 113
                                          +              ++    k+gg+++ ++++
       KHJ33625.1 470 vktnkdnidfL---------KlphlqkqlllaaidSVDHGSKTGGYIVYSTCS 513
                      53333333332.........233333333355555777777888888888888 PP

>> Fibrillarin  Fibrillarin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2      0.59   2.1e+03     184     204 ..      50      70 ..      46      75 .. 0.82
   2 ?   13.6   0.0   7.6e-06     0.027      68     130 ..     377     441 ..     364     464 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.59
                  SSHHHHHHHHHHHHHHTTEEE CS
  Fibrillarin 184 kepeevfkeeveklkeeglkv 204
                  +e+++vfk++++k++++++  
   KHJ33625.1  50 EETKKVFKKDEKKIESSHIAK 70 
                  57899********99988765 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 7.6e-06
                  --TTSEEEEESTTTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHT..TSTTEEEEES-TTS CS
  Fibrillarin  68 ikkgskvLYlGaasGttvsHvsDivgeegvvyavefsprvlrelievak..kRknivPileDArk 130
                   ++++++L + aa G    H++ +++++g+++a +  +   + li   +    kn+v   +DAr 
   KHJ33625.1 377 PQENERILDMAAAPGGKTTHIAALIKNTGCIFANDSNKARAKGLIGNIHrmGAKNVVVCNHDARS 441
                  57899***************************************954431146899999999984 PP

>> DUF2431  Domain of unknown function (DUF2431)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.9e-05      0.18      47     165 ..     426     551 ..     397     554 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4.9e-05
     DUF2431  47 eLeeegvkvlfgVDatkleksklqeklkkekfdriifnFPhvggkstdvnrqvranq.............eLlvsffksakellsekpgeilvtlfege 132
                  + +++  v+++ Da+  +k         ++fdr++   P+ g++   ++  v++n+             +Ll + + s+ +  + + g i+ + ++  
  KHJ33625.1 426 RMGAKN-VVVCNHDARSFPK-------VIGGFDRVLLDAPCSGTGVIAKDPSVKTNKdnidflklphlqkQLLLAAIDSVDHGSKTG-GYIVYSTCSVT 515
                 444433.3667778887773.......4678***********************************999999999999999999999.99998888888 PP

     DUF2431 133 pytlwnik..dlareaglkvvrs.fkFdaeaypgYk 165
                   ++  ++  +l +++++k+v+    F +e +  Y+
  KHJ33625.1 516 VEENEGVVqyALKKRPNIKLVDTgLVFGREGFTAYR 551
                 777766662345555677765541466666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (601 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1412  (0.0787551); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.38
# Mc/sec: 4760.61
//
Query:       KHJ33626.1  [L=2588]
Description: putative gtpase-activator protein for ras-like gtpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.7e-33  114.4   0.3      5e-23   81.9   0.0    2.6  2  RasGAP       GTPase-activator protein for Ras-like GTPase
    1.3e-09   38.3   0.2    6.1e-09   36.2   0.2    2.2  1  CRAL_TRIO_2  Divergent CRAL/TRIO domain
  ------ inclusion threshold ------
       0.13   12.5   0.1        0.5   10.7   0.1    2.0  1  Phage_FRD3   Bacteriophage FRD3 protein
       0.52   10.2   2.7       0.81    9.6   0.1    2.6  3  DASH_Spc19   Spc19


Domain annotation for each model (and alignments):
>> RasGAP  GTPase-activator protein for Ras-like GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   6.7e-11     3e-07       1      68 [.    1245    1312 ..    1245    1316 .. 0.96
   2 !   81.9   0.0   1.1e-26     5e-23     103     208 .]    1316    1417 ..    1311    1417 .. 0.96

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 6.7e-11
      RasGAP    1 liseliklElessenpndllrsnsvvsklleeytkrpegqeyLkkilkpllqkil.ekedlnlelDPrk 68  
                  l+++li+ E++++en  +llr n+v +k+l  y k  +g  yLk  l+++l++++   +dl+lelDP +
  KHJ33626.1 1245 LLEALIEHEVAETENEAELLRRNCVATKILSIYGKW-KGALYLKLTLQKVLKRLIlTSQDLDLELDPAR 1312
                  6889********************************.*****************88***********75 PP

  == domain 2  score: 81.9 bits;  conditional E-value: 1.1e-26
      RasGAP  103 sqmleknldkLkelvneildsIfksleqlPvgiRiickqirekvkekfpdaseeeilnligsflflrfliPaivnPklfglvdkqiseeqrrnLtli 199 
                   ++l+kn  +L+ +++ ++d I++s+  +Pv+ R ic +i   v ++fp+a+    ++++g+f+flrf++Paiv+P+  glvd  +s+e+rr L+li
  KHJ33626.1 1316 TEELQKNALQLRVVTKVFIDDICNSTAHIPVSFRKICSIISSAVMKRFPEAK----FTAVGAFIFLRFFCPAIVAPDAEGLVDLPPSKEMRRGLLLI 1408
                  57899*******************************************9777....***************************************** PP

      RasGAP  200 aKllqnlan 208 
                  aK++qnlan
  KHJ33626.1 1409 AKIVQNLAN 1417
                  *******97 PP

>> CRAL_TRIO_2  Divergent CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.2   1.4e-12   6.1e-09       3     133 ..    1578    1711 ..    1576    1716 .. 0.87

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 1.4e-12
  CRAL_TRIO_2    3 pVfvfiaafllsskadldkllryvlhtladkivgkeyvlVyfhtglssenkpslswlkkvystlprrykknlkklyivhpstfvktllk...tvls 95  
                   p +++i +++ +++ d++ ll+ +l+t    ++ +++ ++++ t  +  n p+ s+++k+  + p ++ k+l k+yi++ ++ +++ +     +  
   KHJ33626.1 1578 PMICIILRNFDAETTDFELLLFGFLKTA-SRMWHRNFGILIDVTRYNGLNEPQDSLFRKLDLLTPTELSKQLSKIYIYNMNSVFRKCFRkilRFTA 1672
                   678999999988999*************.999*************************************************777666662224555 PP

  CRAL_TRIO_2   96 afvsskf.rkkvey..vsrleeLarkidrtqllkslPegvv 133 
                    + ss +  k+vey  + +l++L+ +  + q+  +lP+ + 
   KHJ33626.1 1673 KNESSALhPKNVEYhlIGSLQDLQLHFHLSQI--HLPKETI 1711
                   5778888788888877****************..***7765 PP

>> Phage_FRD3  Bacteriophage FRD3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00011       0.5       5      21 ..    2465    2481 ..    2461    2487 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00011
  Phage_FRD3    5 didivdfeyieeiirnr 21  
                   i ivdf+y+e+++rnr
  KHJ33626.1 2465 SISIVDFDYLEDVVRNR 2481
                  699*************9 PP

>> DASH_Spc19  Spc19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.1   4.8e+03       7      25 ..     144     162 ..     143     167 .. 0.87
   2 ?    9.6   0.1   0.00018      0.81       6      71 ..     399     465 ..     396     473 .. 0.88
   3 ?   -2.2   0.1      0.74   3.3e+03       8      28 ..     883     903 ..     881     907 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHHHHHH CS
  DASH_Spc19   7 SLrssvslLqssietLdsg 25 
                 S ++ ++lL++s ++Ld++
  KHJ33626.1 144 SYQNVINLLEQSPKILDDE 162
                 67899***********987 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00018
                 HHHHHHHHHHHHHHHHHHHHHT.THHHHHHHHHHH-------TTTHHHHHHHHHHHTTTHHHHHHHH CS
  DASH_Spc19   6 sSLrssvslLqssietLdsgvs.dfprlkkvLkttrvFeLipesdleaakaslaeeiePqieellek 71 
                 +S+++ vs+L+   + L+++ +  +  l+ +L+  r+F + +es l  +  +++ee++ ++ + + +
  KHJ33626.1 399 NSISKKVSFLEGLRKFLRNKNEiAVYCLTYILRVARHFRVNSESALLSYALDVQEEVQEAVFKRYAT 465
                 68888999999999999999997778899*****************************999777665 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.74
                 HHHHHHHHHHHHHHHHHHHTT CS
  DASH_Spc19   8 LrssvslLqssietLdsgvsd 28 
                 +++s++lL+ss+  ++++v++
  KHJ33626.1 883 MEQSIHLLSSSNVRIREAVRE 903
                 799*********999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       634  (0.0353617); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.18u 0.27s 00:00:01.45 Elapsed: 00:00:00.49
# Mc/sec: 16003.98
//
Query:       KHJ33627.1  [L=556]
Description: hypothetical protein EV44_g6409 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (556 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.20s 00:00:00.71 Elapsed: 00:00:00.36
# Mc/sec: 4584.71
//
Query:       KHJ33628.1  [L=896]
Description: putative intracellular protein transport protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.2e-101  340.0   0.0   1.2e-101  340.0   0.0    2.0  3  Uso1_p115_head  Uso1 / p115 like vesicle tethering protein, h
    3.2e-15   56.6  19.7    3.2e-15   56.6  19.7    2.9  2  Uso1_p115_C     Uso1 / p115 like vesicle tethering protein, C
  ------ inclusion threshold ------
        3.3    8.1  35.5        1.3    9.5  23.0    2.3  2  Fez1            Fez1
        6.5    5.2  22.1         12    4.4  22.1    1.3  1  Macoilin        Macoilin family


Domain annotation for each model (and alignments):
>> Uso1_p115_head  Uso1 / p115 like vesicle tethering protein, head region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1       1.2   5.4e+03      46      71 ..     119     144 ..     102     153 .. 0.51
   2 !  340.0   0.0  2.6e-105  1.2e-101       1     312 []     338     642 ..     338     642 .. 0.95
   3 ?   -3.7   0.2       1.2   5.2e+03     142     165 ..     762     785 ..     743     798 .. 0.49

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 1.2
  Uso1_p115_head  46 svqvfdlRvAaleclkayltnneelk 71 
                     +vq f  ++ +l++l a l++  e  
      KHJ33628.1 119 DVQDFYSKLCSLKLLAAILSSRTERT 144
                     33444444444444444444444444 PP

  == domain 2  score: 340.0 bits;  conditional E-value: 2.6e-105
  Uso1_p115_head   1 NaqlQeeFakidvp.dpslpseakaaeklklvlvidaLldlaLsaesvqvfdlRvAaleclkayltnneelkleflsraiegykesndetssass 94 
                     N++lQeeF++++v+     p +++++++l  ++vid Ll+++L +   + fd+R+Aa +c+ ayl++++ ++++fl raiegy +++d     + 
      KHJ33628.1 338 NSKLQEEFGQLQVTsL---PLDSHTEGSL--RYVIDGLLEITLNNPTLKDFDIRIAASNCITAYLYKHSIIRQHFLLRAIEGYMKGEDV----TP 423
                     899**********434...4455566555..9*******************************************************99....** PP

  Uso1_p115_head  95 nllealleldae.laldpykvwFasvillhlleeneeakelarsvklgdeesgeevvsliqtiselLitslraaadaRisigylmLLivWlfedp 188
                     n l++ll+++++ +  dpy++wFa+vi++hl+ ++++ k+l+ ++k+gd++sgee+++++q++++ L+++l+ +ad+Ri++gylmLL+ Wlfed 
      KHJ33628.1 424 NFLTILLQPSNDqAIVDPYRIWFAAVIFFHLIFDDSNVKSLVINLKEGDAASGEEEITCLQSLTGRLLMALKDGADERILTGYLMLLCGWLFEDS 518
                     *********9996779******************************************************************************* PP

  Uso1_p115_head 189 daVndfLsessnlqsLiqalsqsssedvlvqGLcaflLGviyefstkdspvsRadlhslltkrigrdnyiskiaqlredelfrkfeeepkl.sss 282
                     d+VndfL+e s+lq+Liq++ +++ ++ +vqGLca+lLG++yefstkdsp++R+++h++l +++g+d+yi+++ +lr+++ +r+fe  p+  + +
      KHJ33628.1 519 DSVNDFLGEASHLQFLIQVVLNKAIDSLIVQGLCALLLGILYEFSTKDSPIPRSTIHQILCSQLGKDKYIDRLLRLRSNSFLRDFEILPQKlNLA 613
                     **************************************************************************************999654665 PP

  Uso1_p115_head 283 kddtglpevyfdseFvelfkdnfsriqral 312
                     +   glpev+f++ Fve++kdnfsr+ ral
      KHJ33628.1 614 PI-GGLPEVFFEKLFVEFIKDNFSRLLRAL 642
                     55.*************************97 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 1.2
  Uso1_p115_head 142 deesgeevvsliqtiselLitslr 165
                     + es++ ++ ++q+ ++lL t l+
      KHJ33628.1 762 TRESNKTEICSLQKSINLLETELQ 785
                     233334444444444444444444 PP

>> Uso1_p115_C  Uso1 / p115 like vesicle tethering protein, C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.1  19.8         4   1.8e+04       9      75 ..     672     740 ..     663     769 .. 0.61
   2 !   56.6  19.7   7.2e-19   3.2e-15       6     123 ..     766     895 ..     761     895 .. 0.84

  Alignments for each domain:
  == domain 1  score: -5.1 bits;  conditional E-value: 4
  Uso1_p115_C   9 eaaslkdeneklkaelqslskalesleqk..eakkaaesqakeleaenkklekeleklraelkeekeke 75 
                  + ++ +++ e+++ +++ l++++ ++++   + k  ae++ +++++ nk l+++  kl  +l++e  + 
   KHJ33628.1 672 QLEEKQQLLERYEEDIKILTSKYDQEQSYhqNTKVTAEEELNKIKQANKLLKENESKLAIKLSQEHDQV 740
                  445566777778888888888887777777667777888888888888888874444444444443332 PP

  == domain 2  score: 56.6 bits;  conditional E-value: 7.2e-19
  Uso1_p115_C   6 leseaaslkdeneklkaelqslskalesleqk.........eakkaaesqakeleaenkklekeleklraelkeekekekek...qkEldDLLlllgD 91 
                   ++e  sl++  + l++elq ++++++ l+++         ++++ +++ +k++++  +k + +++k +      + kekek   q+El+DLL++++D
   KHJ33628.1 766 NKTEICSLQKSINLLETELQLSQTNAKHLQNAydllrisdkNNLELIDTLKKKVQDLEIKYNAAVKKSSNLEISLADKEKEKsltQAELEDLLIVFSD 863
                  5667778999999999999999999999999998777777767777788888888888888888888777666667777777788************* PP

  Uso1_p115_C  92 leeKvekykarLkelGeevsddedddeddeed 123
                   eeKv+kyk +Lk lGe+vsd ed+d d e++
   KHJ33628.1 864 VEEKVKKYKVKLKALGETVSDAEDEDVDAEDS 895
                  *****************************995 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5  23.0   0.00028       1.3      31     159 ..     663     799 ..     655     808 .. 0.76
   2 ?    3.9   5.0     0.014        63      35     108 ..     814     887 ..     804     895 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00028
        Fez1  31 seiv.alkaqlrelrakleekeeeikeleesleektle....levcenelqrkkseaellrekvekleeelkelreelselsleeeeaa...lesdeak 121
                  e+v +l+aql e ++ le+ ee ik l +++++ +        + e+el++ k+ ++ll+e+ +kl  +l++ ++++ +  +++ e+    +++d  +
  KHJ33628.1 663 REMVdSLRAQLEEKQQLLERYEEDIKILTSKYDQEQSYhqntKVTAEEELNKIKQANKLLKENESKLAIKLSQEHDQVVQEYKRQLEHLataAKKDVEQ 761
                 5777469*******************99999887665422213346899**************999999888887776664444333333334444455 PP

        Fez1 122 aqrqeaeeleelkreverlraeLkeerqkkeeqassFe 159
                 +++++++e+ +l+++++ l++eL++ + + ++ +++++
  KHJ33628.1 762 TRESNKTEICSLQKSINLLETELQLSQTNAKHLQNAYD 799
                 5566688999******************9999999887 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.014
        Fez1  35 alkaqlrelrakleekeeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsl 108
                 +lk ++++l+ k ++  ++ ++le sl +k++e    ++el+      + ++ekv+k++ +lk l e++s+++ 
  KHJ33628.1 814 TLKKKVQDLEIKYNAAVKKSSNLEISLADKEKEKSLTQAELEDLLIVFSDVEEKVKKYKVKLKALGETVSDAED 887
                 799***********************************************************999998888654 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4  22.1    0.0026        12     319     473 ..     692     845 ..     653     888 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0026
    Macoilin 319 kssssssssnknskkasagsagssnssskkhsessksvtsssssknskkqklpaGkssaalkdaaenslpnnqlskkdalvrLeadikkLkaeLqasrq 417
                 ++  +++s ++n+k ++ +  +  + + k ++e++++ +   s+++++  +    ++ ++l  aa++ + +++ s+k +++ L++ i+ L +eLq s+ 
  KHJ33628.1 692 SKYDQEQSYHQNTKVTAEEELNKIKQANKLLKENESKLAIKLSQEHDQVVQE-YKRQLEHLATAAKKDVEQTRESNKTEICSLQKSINLLETELQLSQT 789
                 2222333334666666666666666666666655555544444433333222.346666888999999999999************************* PP

    Macoilin 418 teqelrskissltseerslkselqqlkkendllqtklhelvsakqkdkqtlqqlek 473
                 + + l++ +++l  ++++  + +++lkk+ + l  k++ +v++  +   +l   ek
  KHJ33628.1 790 NAKHLQNAYDLLRISDKNNLELIDTLKKKVQDLEIKYNAAVKKSSNLEISLADKEK 845
                 **************9***999*****************999887766666655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (896 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2180  (0.121591); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.94u 0.29s 00:00:01.23 Elapsed: 00:00:00.48
# Mc/sec: 5609.59
//
Query:       KHJ33629.1  [L=968]
Description: putative 5 -3 exoribonuclease 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   7.3e-147  489.9   0.3   7.3e-147  489.9   0.3    2.3  2  XRN_M      Xrn1 helical domain
    1.2e-99  332.7   1.2    1.3e-99  332.5   0.0    1.7  2  XRN_N      XRN 5'-3' exonuclease N-terminus
  ------ inclusion threshold ------
       0.12   12.2   1.0        0.3   10.9   1.0    1.7  1  zf-CCHC_2  Zinc knuckle


Domain annotation for each model (and alignments):
>> XRN_M  Xrn1 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.3      0.52   3.1e+03      89     112 ..     114     137 ..      87     160 .. 0.45
   2 !  489.9   0.3  1.2e-150  7.3e-147       1     441 [.     325     836 ..     325     838 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.52
       XRN_M  89 rkekklakeeeaskedaaneeaav 112
                 ++++++ + +ea+++++  e+   
  KHJ33629.1 114 QRSRRFRSAKEAKEKADDREQYLK 137
                 222222222222221111111111 PP

  == domain 2  score: 489.9 bits;  conditional E-value: 1.2e-150
       XRN_M   1 kfdleriiDDfvFlcFFvGNDFLPhlPsLeiregaidlllkvYkkelkklggyltdngevkldrveklvslvgkveekifrkrkeredrkekklakeee 99 
                 kfdler++DD+vF+cFFvGNDFLPhlPsLeire+ id l+ ++++ ++++ggylt++g+v+l+r++ +++ ++  e++ifr+rk++edr+e + ++++ 
  KHJ33629.1 325 KFDLERALDDWVFMCFFVGNDFLPHLPSLEIRENGIDTLIAIWRDNIPTMGGYLTKDGQVDLKRAQIILQGLAIQEDAIFRRRKQIEDRREANNKRRKL 423
                 68***************************************************************************************9999999888 PP

       XRN_M 100 askedaaneeaavaeeklseskvak....................................................................saeaea 130
                 ++++d   + + + + ++s  k ++                                                                    + ++e+
  KHJ33629.1 424 EKDRDGRGRPNERLNLQESPPKNKNttnhrhsapsglpifapgelskeakaltydmvvnrgaiykanqanksaaaalkskmnanideknssafETNIEN 522
                 887776555444444333332222245678899*****************************************************9999877555555 PP

       XRN_M 131 eaeae.aeaeakaekekrekaekeleeseeeeeeeDkvrLgeeGykeRYYkekfevsseeieqrrevvqkYveGLcWvlrYYyqGvaSWkWfyPyhyaP 228
                 ++ +  +++++ ++ e++ + + e+ +++++e + D+vrL+eeGy eRYY++kf ++++++++r++v+++YveGL Wvl YY+qG++SW W+yPyhyaP
  KHJ33629.1 523 TKTTPsTSKRKASTLEHEITSQPETPQTADDEPQIDTVRLWEEGYAERYYEQKFGADPKDLNFRHKVAKAYVEGLAWVLLYYFQGCPSWDWYYPYHYAP 621
                 44443034444444455555556666777778889**************************************************************** PP

       XRN_M 229 FaSDlknladlkikFekgspfkpleqLmavlPaaskkalPkayqkLmtdpdSpiidlypedfeidlnGkrvaWqgvaklPfidekrLlealakleeeLt 327
                 Fa D+++++d++i+F+kg  f p+eqLm+vlPa s +a+Pk +++Lmt+p+S+iid+ypedfeidlnGk+ aWqgva+lPfid krLl+a+ak+++ L 
  KHJ33629.1 622 FAADFTEISDMEISFKKGRIFLPFEQLMGVLPAGSRQAIPKEFHHLMTSPESEIIDFYPEDFEIDLNGKKWAWQGVALLPFIDSKRLLDAMAKIYPRLP 720
                 *************************************************************************************************** PP

       XRN_M 328 eeEkkRNtrksdvlfvsktskkae.allaklsekekdeeklkideklseglngslalaeeavvekklssplk..elediednkvlcvkyelPkkddyvh 423
                 ++ ++RN++++dvl++ +++++ + ++++++++k++ + + k+++k+++gl+g +  +++ + ++ l spl+  +l+++ +++ ++v+y+ Pk   y+h
  KHJ33629.1 721 SDVAARNSVGKDVLLFAENNQLLYdEVAKNFYSKKQGSRNFKLNPKICQGLSGEIEKNDTYLPHSSLISPLTsgNLPNLDNDRSITVHYQMPKL-TYTH 818
                 ****************9999987647888999999999********************************99999******************9.99** PP

       XRN_M 424 iaellpgvvlpekvlkee 441
                 ++ ll g+ +p++vl+ +
  KHJ33629.1 819 KSMLLRGASIPPPVLTLA 836
                 **************9876 PP

>> XRN_N  XRN 5'-3' exonuclease N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  332.5   0.0  2.2e-103   1.3e-99       1     241 [.       1     253 [.       1     254 [. 0.90
   2 ?   -4.0   1.1       1.4   8.2e+03     114     152 ..     492     529 ..     482     544 .. 0.50

  Alignments for each domain:
  == domain 1  score: 332.5 bits;  conditional E-value: 2.2e-103
                 XXX-HHHHHHHHHSGGGEEE------................SSSS-EEEEEEETHHHHHHHHS-SSS-......--SSHHHHHHHHHHHHHHHHHHH- CS
       XRN_N   1 mGvpklfrwlserypkivkevieeee................eeekefdnLYlDmNgiihkcshkedkeekelskkpkteeeifkkifkyidrlvkivr 83 
                 mGvp+lfrwls++ypkiv+ viee+                 ++++efdnLYlDmNgi+h+csh+ed         pk+e+e++ +ifky dr+vk+vr
  KHJ33629.1   1 MGVPALFRWLSQKYPKIVSPVIEEQPrningqiipvdsrgpnPNGEEFDNLYLDMNGIVHPCSHPED------GPVPKNEDEMMVAIFKYTDRVVKMVR 93 
                 9*********************933345556666666667667788*******************44......559*********************** PP

                 EEEEEEEE------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT..-BB--------GGGSSTTSHHHHHHHHHHHHHHHHHHHH-GGGGG-E CS
       XRN_N  84 prkllylavDGvaPraKmnqqRsRRfrsakeakeekeekeelkeelekee..keeeeeeekfdsnvitpGtefmeklsealkafikkklkedpawknlk 180
                 prkll++a+DGvaPraKmnqqRsRRfrsakeake+++++e+  + +++ee  ++e e++  +dsn itpGt+fm+ l+++l+++i+ kl++d aw n+k
  KHJ33629.1  94 PRKLLMIAIDGVAPRAKMNQQRSRRFRSAKEAKEKADDREQYLKLFKSEEsnNKEPEKKIVWDSNEITPGTPFMDILAASLRYWIAFKLNTDLAWANMK 192
                 ***********************************88766666655555400445588889************************************** PP

                 EEEE-TTS-S-HHHHHHHHHHHHHTSTTS-TT-EEEEE---THHHHHHHHHT-SSEEEEEE CS
       XRN_N 181 vilsdaevpGEGEhKimefirkqrskpeydpntrhviyglDaDLillsLathepniliLre 241
                 vi+sd++vpGEGEhKimefir+qrs+p+++pntrhv+yglDaDLi+l+L thepn+ +Lre
  KHJ33629.1 193 VIISDSTVPGEGEHKIMEFIRSQRSSPDHNPNTRHVMYGLDADLIMLGLGTHEPNFRVLRE 253
                 ************************************************************9 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 1.4
                 HHHHHHHH.HHHHHHHHHHHT-BB--------GGGSSTTS CS
       XRN_N 114 eakeekee.keelkeelekeekeeeeeeekfdsnvitpGt 152
                  +k+++ + k++++ +++  ek+++  e+++++   tp+t
  KHJ33629.1 492 ANKSAAAAlKSKMNANID--EKNSSAFETNIENTKTTPST 529
                 333333222222222222..33333455555566666666 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.0   5.1e-05       0.3       5      14 ..     264     273 ..     264     273 .. 0.98

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 5.1e-05
   zf-CCHC_2   5 vChiCgkkGH 14 
                 vC++C++ GH
  KHJ33629.1 264 VCKLCNQTGH 273
                 8********* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (968 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       967  (0.053935); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.77u 0.33s 00:00:01.10 Elapsed: 00:00:00.49
# Mc/sec: 5890.20
//
Query:       KHJ33630.1  [L=254]
Description: hypothetical protein EV44_g4701 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.29   11.7   1.1        1.5    9.4   0.9    2.0  2  Ribosomal_L14e  Ribosomal protein L14


Domain annotation for each model (and alignments):
>> Ribosomal_L14e  Ribosomal protein L14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.9   8.2e-05       1.5      30      67 ..     140     181 ..     132     184 .. 0.65
   2 ?   -0.8   0.0      0.12   2.2e+03      13      36 ..     227     251 ..     225     253 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 8.2e-05
  Ribosomal_L14e  30 kawekadveekwaksawakklaar....ekraaltDFdRFkv 67 
                     +++    v+  +++ +w k+   +    +  +++tDF+ F +
      KHJ33630.1 140 EEFRGRTVKYSFEQEKWLKNFLVKrlnvAFEKNMTDFENFSL 181
                     55555666667777777775544411115667*******975 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.12
  Ribosomal_L14e  13 tkivl.klprgartgavkkawekad 36 
                     t+ v   +p+++++  + k+ e+ad
      KHJ33630.1 227 TSAVTsPIPKNMSSDDLVKETENAD 251
                     5566668999***999999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1879.33
//
Query:       KHJ33631.1  [L=310]
Description: hypothetical protein EV44_g3236 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      0.001   18.0   0.8     0.0013   17.7   0.8    1.3  1  NMDAR2_C       N-methyl D-aspartate receptor 2B3 C-terminus
  ------ inclusion threshold ------
        1.7    8.5  12.8        3.6    7.4   7.2    3.2  2  A2L_zn_ribbon  A2L zinc ribbon domain
        2.7    7.5   8.3        7.5    6.1   0.1    3.3  3  zf-FLZ         zinc-finger of the FCS-type, C2-C2
        5.5    7.6  16.6          3    8.5   5.4    2.5  2  Stc1           Stc1 domain


Domain annotation for each model (and alignments):
>> NMDAR2_C  N-methyl D-aspartate receptor 2B3 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.8     3e-07    0.0013     358     428 ..      88     156 ..      36     211 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 3e-07
                 XXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXX.XXX.XXXXXXXXXX.XXXXXXXXXXXXXXXXXXX CS
    NMDAR2_C 358 yskhkklkeKnglaspsesndrlkeksthCRsClskl.saygagsssvrspykrCdaCkklgnLYdisEDnl 428
                    +++l   + +   s +n +++++ +hC+ C+ +l +           ++k+C++C++  +LYd+s+D++
  KHJ33631.1  88 VVENSNLARETHQLDCSTTNITHTSNLIHCKGCRKNLdPKA-FHDLIQNKSFKQCNDCRH--DLYDVSDDDV 156
                 33333333333334455666777788899********5555.777778899********9..8*******87 PP

>> A2L_zn_ribbon  A2L zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.3     0.036   1.6e+02       2      12 ..       3      13 ..       2      14 .. 0.78
   2 ?    7.4   7.2    0.0008       3.6       1      27 [.     112     144 ..     112     145 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.036
  A2L_zn_ribbon  2 nlkvCsvCggn 12
                   ++++C++C  n
     KHJ33631.1  3 SNRICTKCFQN 13
                   5899****665 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0008
  A2L_zn_ribbon   1 snlkvCsvCggng......ilnseqgylvCieC 27 
                    snl++C++C++n       +l+++++  +C++C
     KHJ33631.1 112 SNLIHCKGCRKNLdpkafhDLIQNKSFKQCNDC 144
                    799********98333333477**********9 PP

>> zf-FLZ  zinc-finger of the FCS-type, C2-C2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.1    0.0017       7.5       4      22 ..      20      38 ..      17      44 .. 0.85
   2 ?    4.7   0.3    0.0048        21       8      26 ..     109     127 ..     102     132 .. 0.81
   3 ?   -0.2   0.4      0.16   7.2e+02      13      25 ..     138     150 ..     129     154 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0017
      zf-FLZ  4 saevetahfLsaCflCkkk 22
                +++vet++f ++C +C+ +
  KHJ33631.1 20 TKNVETNTFFRTCLICRNR 38
                56899***********965 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0048
      zf-FLZ   8 etahfLsaCflCkkkLgeg 26 
                 ++ + L +C  C+k+L+++
  KHJ33631.1 109 THTSNLIHCKGCRKNLDPK 127
                 56677899********986 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.16
      zf-FLZ  13 LsaCflCkkkLge 25 
                  ++C  C+ +L +
  KHJ33631.1 138 FKQCNDCRHDLYD 150
                 6899999999865 PP

>> Stc1  Stc1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   3.4     0.013        60      55      84 ..       7      36 ..       2      37 .. 0.89
   2 ?    8.5   5.4   0.00067         3      27      84 ..      89     145 ..      73     146 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.013
                -SSS--EEESTTS-HHHHHS.SS---HHHH CS
        Stc1 55 CsaCqktkpldeFsksqrrkpdaarCkdCv 84
                C+ C + kp  +++k+  +++   +C  C 
  KHJ33631.1  7 CTKCFQNKPSTNYTKNVETNTFFRTCLICR 36
                9*******************8888899995 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00067
                 EE-S-.......----TTTS--.---EEE-SSS--EEESTTS-HHHHHS.SS---HHHH CS
        Stc1  27 aeekakvkkakskikCkectak.qateleCsaCqktkpldeFsksqrrkpdaarCkdCv 84 
                  e +++  + ++++ C++         ++C+ C+k ++ ++F    ++k + ++C+dC 
  KHJ33631.1  89 VE-NSNLARETHQLDCSTTNIThTSNLIHCKGCRKNLDPKAFHDLIQNK-SFKQCNDCR 145
                 44.5666777788999877655144559***************999988.8999****6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       880  (0.0490825); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2309.81
//
Query:       KHJ33632.1  [L=372]
Description: putative ser thr protein phosphatase family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       387  (0.0215851); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2984.77
//
Query:       KHJ33633.1  [L=138]
Description: hypothetical protein EV44_g3924 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       395  (0.0220313); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1082.83
//
Query:       KHJ33634.1  [L=162]
Description: hypothetical protein EV44_g3547 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       741  (0.0413297); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.19s 00:00:00.58 Elapsed: 00:00:00.34
# Mc/sec: 1421.89
//
Query:       KHJ33635.1  [L=166]
Description: putative mitochondrial 37s ribosomal protein -t [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00011   22.2   0.2    0.00018   21.6   0.2    1.3  1  CHCH      CHCH domain


Domain annotation for each model (and alignments):
>> CHCH  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.2     1e-08   0.00018       1      33 [.      36      68 ..      36      69 .. 0.98

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 1e-08
                THHHHHHHHHHHHHCTSSTTTTHHHHHHHHHHH CS
        CHCH  1 CgeefkeylkClkdnsdefskCrkefeafkeCv 33
                C+  ++  l+C+ +n++++  C+++ +++++C+
  KHJ33635.1 36 CLSIMSSVLTCWASNGFNIVGCQNLETQLRSCM 68
                9999****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1262.47
//
Query:       KHJ33636.1  [L=473]
Description: putative citrate mitochondrial precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   4.8e-102  341.7   0.0   6.1e-102  341.4   0.0    1.1  1  Citrate_synt  Citrate synthase, C-terminal domain
  ------ inclusion threshold ------
      0.073   12.8   0.0       0.16   11.7   0.0    1.5  1  Eclosion      Eclosion hormone


Domain annotation for each model (and alignments):
>> Citrate_synt  Citrate synthase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  341.4   0.0  6.8e-106  6.1e-102       1     361 []      79     458 ..      79     458 .. 0.92

  Alignments for each domain:
  == domain 1  score: 341.4 bits;  conditional E-value: 6.8e-106
                   GGTTEEEEEESSEEEETTTTEEEETTEEHHHHH.........HHHS-HHHHHHHHHHSS---HHHHHHHHHHHHCTTS--HHHHHHHHCSSTTS-HH CS
  Citrate_synt   1 glrgvaaleteisevdgekgelrYRGydieeLa.........eekssfeevaylLltgelPtkeelkefkeelaearklpekvlealealpkdahpm 88 
                   g rg++al +e s +d ++  +r+RG +i+e +         +++   e  ++lLltge+Pt ++++++++++a+++++p+ v e +++ p+d+hpm
    KHJ33636.1  79 GARGIKALVWEGSVLDADQ-GIRFRGKTIPE-CqkllpkapgGQEPLPEGLFWLLLTGEIPTDQQVRDLSADWAARSEIPKFVEELIDRCPNDLHPM 173
                   67999**********9444.49*********.77*******6545556778999***************************9999999********* PP

                   HHHHHHHHHHHHHSTT......CTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS.--.---TTSSHHHHHHHHHHSS---HHHHHHHHHHHHH CS
  Citrate_synt  89 avlraavsalsaddee......seakeeseeaalrdalkliAklptiaaaiyrarlgrepl.epddklsyaenflymlrgkkpdeeeaklldlalvl 178
                   a+l++av al++++        + +k+e+++++++da++liAklptiaa+iy++ +++ ++   +++++y+ nf++ l     ++++++l++l+l++
    KHJ33636.1 174 AQLSIAVVALEHESAFakayskGMSKTEYWKHTYEDAMDLIAKLPTIAARIYQNIFKGGKVvPAQKDKDYSFNFANQLGF-GDNQQFVELMRLYLTI 269
                   *********6666555555555888888****************************98788456688***********54.6689************ PP

                   HS--SS.SHHHHHHHHHHTTT--HHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHSSGG........GHHHHHHHHHHTTTS--TTBC-SSSSS--HH CS
  Citrate_synt 179 haDHel.naSTfaarvvaStladlysaiaagigalkGplhgganeavlkmleeigsaev.......eveeylekvlakekerlpGfGHrvykksDpR 267
                   h DHe+ n+S+++a++v+S+l+ ++ ++aa++++l+Gplhg an++vl++l+++ +a++       ++++yl+++l+++ +++pG+GH+v++k+DpR
    KHJ33636.1 270 HTDHEGgNVSAHTAHLVGSALSSPMLSLAAALNGLAGPLHGLANQEVLNWLTKM-KASIgddisdeNIKDYLWSTLKSG-QVVPGYGHAVLRKTDPR 364
                   ******************************************************.77788999**************96.***************** PP

                   HHHHHHHHHHHHTCHTHHHHHHHHHHHHHHHHHHHHCHH.GCT-EB-THHHHHHHHHHTT--GGG.HHHHHHHHHHHHHHHHHHHHH.HT------E CS
  Citrate_synt 268 akilkelaeelaeekgkdpllklaeeleevapevlkeke.eknlypNvDfysgvlyralgipeel.ftvlfaisRvaGwlAhileql.adnkiiRPr 361
                   + +++e+ae++      dp++kl+++++++ap vl+e+  +kn+ypNvD++sgvl++++g++e+  +tvlf++sR++G++ +++  +     i+RP+
    KHJ33636.1 365 YIAQREFAEKHLP---ADPMYKLVSQVYKIAPGVLTEHGkTKNPYPNVDAHSGVLLQYYGLTESNfYTVLFGVSRAIGIMPQLIIDRaIGAPIERPK 458
                   ********99987...8*******************9999*********************99855******************9874446699996 PP

>> Eclosion  Eclosion hormone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.8e-05      0.16      34      51 ..      95     112 ..      86     117 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.8e-05
    Eclosion  34 aeaClkfkGkliPdCedi 51 
                 a+  ++f+Gk+iP+C+ +
  KHJ33636.1  95 ADQGIRFRGKTIPECQKL 112
                 78889**********975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (473 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.20s 00:00:00.73 Elapsed: 00:00:00.36
# Mc/sec: 3894.01
//
Query:       KHJ33637.1  [L=311]
Description: putative mitochondrial dna replication protein yhm2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.4e-29  100.3   3.5    3.2e-13   49.4   0.0    3.2  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   4.5e-10     8e-06      20      84 ..      33      90 ..      15     102 .. 0.78
   2 !   24.3   0.7   1.3e-09   2.3e-05      11      88 ..     114     193 ..     105     202 .. 0.73
   3 !   49.4   0.0   1.8e-17   3.2e-13       2      93 ..     209     299 ..     208     302 .. 0.91

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 4.5e-10
                HHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHH CS
   Mito_carr 20 tlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfv 84
                t++ +Pl+v+Kt + ++++ +       ++ +l++++   G++g+y+Gl+p     a+++++ ++
  KHJ33637.1 33 TSLGQPLEVIKTTMAANRSDN-------FVAALRRVWARGGVLGFYQGLIPWAWIEASSKGAVLL 90
                56889*********9999886.......999*******************977777666665554 PP

  == domain 2  score: 24.3 bits;  conditional E-value: 1.3e-09
                 HHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS..HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr  11 aGglagavatlvttPldvvKtrlqtqkksskksksaa..ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyet 88 
                  G+++g++++ +t+ + +    + + k++ ++++ ++  +++++  iy+++G+rg  +G+++  +r++ +++ +f+l   
  KHJ33637.1 114 GGVVGGMAQAYATMGFCTCMKTVEITKSKLASTGVKPpgTFSTFMDIYRKDGIRGINKGVNAVAIRQMTNWGSRFGLSRL 193
                 566666777777776655444444444444444444456************************************98655 PP

  == domain 3  score: 49.4 bits;  conditional E-value: 1.8e-17
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   2 elsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 +ls+++++la++l+g ++    +P++v+++ +q++k+  +  k+  ++++ + iy+++Gl glyrG++p++  ++ ++++++++ ++ k ++
  KHJ33637.1 209 PLSAWERILASALGGGLS-AWNQPIEVIRVEMQSKKEDPNRPKKMTVVNTAQYIYRSNGLQGLYRGVVPRIGLSVWQTVCMVAMGDMAKMYV 299
                 578999*******99996.579****************99999888**********************************999999988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2334.09
//
Query:       KHJ33638.1  [L=730]
Description: putative rna binding protein nrd1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-09   38.0   0.0      2e-09   37.1   0.0    1.5  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
    1.1e-09   38.9   0.0    2.4e-09   37.9   0.0    1.6  1  CTD_bind  RNA polymerase II-binding domain.


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0   2.2e-13     2e-09      10      66 ..     497     548 ..     490     552 .. 0.89

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 2.2e-13
                 SSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETT CS
       RRM_1  10 vteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklgg 66 
                  te+eL++lFs +G+++++ + rd     k++afV++ s+ dA  A++a+ ++ ++ 
  KHJ33638.1 497 GTEQELRQLFSRYGQVQTCVVNRD-----KRHAFVKMVSRADAVTAKDAMEKTRMPE 548
                 59**********************.....*********************9987765 PP

>> CTD_bind  RNA polymerase II-binding domain.
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.9   0.0   2.7e-13   2.4e-09       1      63 []      61     138 ..      61     138 .. 0.80

  Alignments for each domain:
  == domain 1  score: 37.9 bits;  conditional E-value: 2.7e-13
    CTD_bind   1 kLnllYLaNdvlq.............nskrkq......kdefapaFapvlpeafadaykkapekikkklkrllniWeernvf 63 
                 kL +lY++++v++             n    +          + + ++ lp +++d++++ap+++k+k+++l++iWe+ ++f
  KHJ33638.1  61 KLGVLYVVDSVTRkwteqaklagqtiN----StahdgtFAAGVHRVKELLPVLMNDIIHTAPNDQKEKIRKLIDIWEKGQTF 138
                 89***********55555555554443....0444345555699999999999*************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (730 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.42
# Mc/sec: 5167.62
//
Query:       KHJ33639.1  [L=317]
Description: putative endo alpha-1,4 polygalactosaminidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-78  262.6   0.0    3.1e-78  262.3   0.0    1.0  1  Glyco_hydro_114  Glycoside-hydrolase family GH114


Domain annotation for each model (and alignments):
>> Glyco_hydro_114  Glycoside-hydrolase family GH114
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  262.3   0.0   1.7e-82   3.1e-78       1     231 [.      87     312 ..      87     313 .. 0.97

  Alignments for each domain:
  == domain 1  score: 262.3 bits;  conditional E-value: 1.7e-82
  Glyco_hydro_114   1 twqyqlqgplets.pdavdvydiDlfdtsaatiaalkakgkkviCYfsaGevedwrpdaddfnpasvlgkkldgWpgerwldirtaakrsskvr 93 
                      +wq++l+++l+++ +d + vydiDlf ++a  i++l+a+++kviCYfsaG++e++rpd+d+f    + g +ldgWp+e wl+++     s++vr
       KHJ33639.1  87 RWQIVLNSTLTNQsFD-APVYDIDLFLNNARIISSLHANNRKVICYFSAGSYEPFRPDSDRF-HTRDKGLQLDGWPDEFWLNTN-----SRNVR 173
                      5******999987466.*********************************************.8999*****************.....899** PP

  Glyco_hydro_114  94 simkaridlaaakGfdgvepDnvDsyesndtgflltaadqlayvkflaaeaharglaiglknageliselvdafdfavnEecaeyseCdtyepf 187
                      +imk+r+++aa+ G+dgv+pDn+D++ +n +g++lt +++++y++fla eah+ glaiglknag ++++++d +++ +nE+c ++ eC++++pf
       KHJ33639.1 174 KIMKNRLRRAARIGCDGVDPDNIDAF-DNLNGLGLTTNHAIDYLRFLATEAHRLGLAIGLKNAGAIVTDVLDIMEWELNEQCLQFGECGKFQPF 266
                      **************************.799**************************************************************** PP

  Glyco_hydro_114 188 iaagkpVfhiEYp....vsaaedaaacaaasraagfstvvkdldLddk 231
                      ++ gkpVfhiEYp    + + + +++c+ +sra+gfst++k+ +Ld +
       KHJ33639.1 267 VDVGKPVFHIEYPeiipNFSMASSDYCR-DSRAQGFSTILKNIQLD-D 312
                      ***************9988899******.****************5.4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       502  (0.0279993); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2388.57
//
Query:       KHJ33640.1  [L=651]
Description: putative nucleolar gtp-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.4e-47  160.0   0.1    4.4e-47  160.0   0.1    2.1  2  NOG1_N          NOG1 N-terminal helical domain
    2.3e-27   94.7   6.3    5.3e-27   93.6   6.3    1.6  1  NOGCT           NOGCT (NUC087) domain
    2.5e-26   91.2   0.6      5e-26   90.3   0.6    1.6  1  NOG1            Nucleolar GTP-binding protein 1 (NOG1)
    1.5e-16   60.5   0.0    3.9e-16   59.1   0.0    1.8  1  MMR_HSR1        50S ribosome-binding GTPase
    3.7e-09   36.3   0.0    7.3e-09   35.3   0.0    1.5  1  FeoB_N          Ferrous iron transport protein B
    0.00016   21.6   0.3      0.074   13.0   0.1    3.2  3  RsgA_GTPase     RsgA GTPase
     0.0007   19.0   0.2     0.0007   19.0   0.2    1.8  2  Gtr1_RagA       Gtr1/RagA G protein conserved region
     0.0014   19.0   0.0       0.24   11.8   0.0    3.2  3  AAA_16          AAA ATPase domain
     0.0068   16.5   1.0          4    7.5   0.0    3.0  3  Dynamin_N       Dynamin family
  ------ inclusion threshold ------
      0.022   15.2   1.0       0.49   10.8   0.0    3.1  3  AAA             ATPase family associated with various cellula
       0.11   12.8   0.2       0.66   10.2   0.0    2.4  2  Roc             Ras of Complex, Roc, domain of DAPkinase
        3.1    6.4   4.3        5.8    5.5   4.3    1.4  1  Astro_capsid_N  Astrovirus capsid protein precursor
          4    7.9   0.0          4    7.9   0.0    3.3  1  AAA_23          AAA domain


Domain annotation for each model (and alignments):
>> NOG1_N  NOG1 N-terminal helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.0   0.1   3.2e-50   4.4e-47       2     160 .]       6     164 ..       5     164 .. 0.99
   2 ?   -3.1   0.9       4.7   6.5e+03      34      47 ..     605     618 ..     583     628 .. 0.54

  Alignments for each domain:
  == domain 1  score: 160.0 bits;  conditional E-value: 3.2e-50
      NOG1_N   2 ekiptvptseelidkalrrakraakttkkkkneikrlrnlearkvrtasntlsdkLeeivkkfPnldelhpFyrelldvlvdkdelkksLaqvkwarkl 100
                 + i  vpts e++d  l+r++r  +t  +++  i+r+rn+++rkv+++++t+s+k++ i++ fP+l+++hpF+++ll++l+d d++k++L+q+++a++l
  KHJ33640.1   6 KDIAPVPTSAEFLDIVLSRTQRRLPTQIRAGFTISRIRNFYTRKVKYTQETFSEKFSLILNGFPRLQDIHPFHKDLLNTLYDADHFKIALGQLSTAKHL 104
                 67999********************************************************************************************** PP

      NOG1_N 101 irkigkeyvnklkkaddkkeakelrreafgrvasvlkkvdkaldfLedvrkkLrkLpaiD 160
                 i+ ++++yv++lk+a+++ ++k+l+r+a+gr+a++ ++ ++ l +L +vr++L +Lp+iD
  KHJ33640.1 105 IEIVSRDYVRLLKYAQSLFQCKQLKRAALGRMATICRRLKDPLIYLDQVRQHLGRLPSID 164
                 ***********************************************************9 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 4.7
      NOG1_N  34 eikrlrnlearkvr 47 
                 +++r+++l +rk++
  KHJ33640.1 605 KAERAQKLSQRKMN 618
                 23333333333332 PP

>> NOGCT  NOGCT (NUC087) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.6   6.3   3.8e-30   5.3e-27       1      54 []     402     455 ..     402     455 .. 0.99

  Alignments for each domain:
  == domain 1  score: 93.6 bits;  conditional E-value: 3.8e-30
       NOGCT   1 rklerdleeenggagvYsvdlkkkYllkndewkyDiiPEildGkNvaDFidpdI 54 
                 rkl+rd+++enggagvY++dlk +Y+l+nd+wkyD+iPEi+dGkNv+DFidpdI
  KHJ33640.1 402 RKLARDIQDENGGAGVYNADLKSDYILENDDWKYDKIPEIYDGKNVYDFIDPDI 455
                 89***************************************************9 PP

>> NOG1  Nucleolar GTP-binding protein 1 (NOG1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.3   0.6   3.6e-29     5e-26       1      58 []     234     291 ..     234     291 .. 0.99

  Alignments for each domain:
  == domain 1  score: 90.3 bits;  conditional E-value: 3.6e-29
        NOG1   1 eIEkqAiaALkhladavlFllDpseecgysleeQlsLleeikelfankpvivvlnKiD 58 
                 +IE+q+i+A++hl++++l+++D+se+cgys++ Q++L+++ik+lfank v++v+nKiD
  KHJ33640.1 234 TIEMQSITAIAHLRSVILYFMDLSEQCGYSVQAQMQLFKSIKPLFANKLVFIVINKID 291
                 6********************************************************9 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.1   0.0   2.8e-19   3.9e-16       3     114 .]     171     289 ..     169     289 .. 0.71

  Alignments for each domain:
  == domain 1  score: 59.1 bits;  conditional E-value: 2.8e-19
                 EEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSS....HHHHHHHHHHHHHHHHCTSEEEEEEETTTT.CSHHHHHH CS
    MMR_HSR1   3 aivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgkeielvDtpGlie....gaseekglgkaflaleeadlillvvdasee.klkpldee 96 
                 +i G+pNvGKS++++++t++ + v+ +++tT+    g++++k  +++ +DtpG+++    + ++ ++ + +  a+ + ++il+ +d+se+ +++ +  +
  KHJ33640.1 171 LICGYPNVGKSSFLRSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDhpleEMNTIEMQSITAIAHLR-SVILYFMDLSEQcGYSVQ-AQ 267
                 799*************************************999**********874232122222233333333555.9*******9933444322.33 PP

                 HHHHHHH....TTSEEEEEEES CS
    MMR_HSR1  97 leellee....akkplilvlnk 114
                 ++ +++     a+k +++v+nk
  KHJ33640.1 268 MQLFKSIkplfANKLVFIVINK 289
                 3333211346777778888887 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   5.3e-12   7.3e-09       3     155 ..     170     334 ..     168     335 .. 0.74

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 5.3e-12
                 EEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEEEEEEETTEEEEEEE----..SSSSSSSHHHHHHHHHHHCTSSSEEEEEEE.....GGGHHHH CS
      FeoB_N   3 valvGnpnvGkttlfnaltgakqkvgNwpGvtvekkegklklkgkeveivDlPGi..Yslsayseeekvardflleeepdvvvnvvd.....atnlern 94 
                 + ++G pnvGk++++ ++t a+ +v  ++ +t     g++++k  +++ +D PGi  + l+++++ e  + + +++    v++  +d       +++ +
  KHJ33640.1 170 LLICGYPNVGKSSFLRSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGIldHPLEEMNTIEMQSITAIAH-LRSVILYFMDlseqcGYSVQAQ 267
                 6789***************************************************444567776666666666654.4578888888422222245566 PP

                 HHHHHHHHHT..TSSEEEEEETHHHHHHTTEEE-....HHHHHHHHTS-EEEEBTTTTBTHHHHHHH CS
      FeoB_N  95 LyLtlqllel..gvpvvlalnmideaekkgieid....lkkLsekLgvpvvktsakkkegieellka 155
                 ++L+  +  l  ++ v +++n+id+++ + ++ +    l+ L ++ +v+++++s +++egi+++++a
  KHJ33640.1 268 MQLFKSIKPLfaNKLVFIVINKIDVMRPEDLDNEtqtqLQDLLKSSDVEMLQLSCTTTEGIQDVKNA 334
                 666555544321677889********98776554100045555556799**************9976 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0     0.018        24      99     122 ..     167     190 ..     131     227 .. 0.82
   2 !   13.0   0.1   5.4e-05     0.074      49      99 ..     283     337 ..     272     341 .. 0.88
   3 ?   -1.7   0.0       1.7   2.3e+03     102     114 ..     637     649 ..     602     649 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.018
                  TSEEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase  99 dktsvlvGqSGvGKStLinallpe 122
                   +t +++G   vGKS+++ +++  
   KHJ33640.1 167 TRTLLICGYPNVGKSSFLRSITRA 190
                  48999*************999875 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 5.4e-05
                  EEEEEE-GGG--HHH....HHHHHHHHHHHTTSEEEE--TTTHTTHHHHHHHCTT CS
  RsgA_GTPase  49 pvivlnKiDlleeee....eleelkeelealgyevllvsaktkegleelkellkd 99 
                  + iv+nKiD++  e+    + ++l++ l++ ++e+l +s +t+eg++++k++  d
   KHJ33640.1 283 VFIVINKIDVMRPEDldneTQTQLQDLLKSSDVEMLQLSCTTTEGIQDVKNAACD 337
                  68**********99998877888899999********************987655 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1.7
                  EEEECSTTSSHHH CS
  RsgA_GTPase 102 svlvGqSGvGKSt 114
                   ++ G+ G+GK++
   KHJ33640.1 637 HLFSGKRGMGKTS 649
                  5799*******97 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.2     5e-07    0.0007       2     155 ..     170     323 ..     169     333 .. 0.66
   2 ?   -2.4   0.4       1.8   2.4e+03       3      14 ..     638     649 ..     636     651 .] 0.85

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 5e-07
   Gtr1_RagA   2 vLLmGksgsGKts.mrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqea.fveeylssqkeeifrnvg....vliyVfDvesreleed 94 
                 +L++G  + GK+s +rsi  + +  +   + + +  +   ++  ++ l ++ +D +G  +  +ee+ + + ++i   ++    v++y +D + +++  +
  KHJ33640.1 170 LLICGYPNVGKSSfLRSITRADVDVQPYAFTTKS--LFVGHF-DYKYLRFQAIDTPGILDhPLEEMNTIEMQSIT-AIAhlrsVILYFMDLS-EQCGYS 263
                 7889999999998446666666666555554444..444445.357899********865155554333333332.22223349*******9.778899 PP

   Gtr1_RagA  95 letlkeilealrqyspeakvfvlihKmDliqedereeifeerkeeireeieklekeeiqff 155
                 ++   ++++ ++    +  vf+ i+K+D ++ +  ++  +++ +++ + ++ +e+ ++++ 
  KHJ33640.1 264 VQAQMQLFKSIKPLFANKLVFIVINKIDVMRPEDLDNETQTQLQDLLKSSD-VEMLQLSCT 323
                 9999999999********************965555444444444444332.232244444 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.8
   Gtr1_RagA   3 LLmGksgsGKts 14 
                 L+ Gk+g GKts
  KHJ33640.1 638 LFSGKRGMGKTS 649
                 899********9 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   0.00017      0.24       9      47 ..     150     190 ..     148     232 .. 0.86
   2 ?   -1.1   0.0       1.6   2.1e+03      53     107 ..     261     330 ..     238     370 .. 0.60
   3 ?    3.2   0.0     0.076     1e+02      28      39 ..     638     649 ..     566     650 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00017
      AAA_16   9 leqLlsalervrsgrp..elvllsGesGvGKsslvrellra 47 
                 l+q+++ l+r+ s +p  + +l+ G++ vGKss +r++ ra
  KHJ33640.1 150 LDQVRQHLGRLPSIDPntRTLLICGYPNVGKSSFLRSITRA 190
                 678999999888888888******************99964 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1.6
      AAA_16  53 giflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleeala..................a 107
                 g+ ++++ + ++s  p+  +a+ l +  ++++++ +  +++ ++ +++l++ l+                  +
  KHJ33640.1 261 GYSVQAQMQLFKSIKPL--FANKLVF-IVINKIDVMRPEDLDNETQTQLQDLLKssdvemlqlsctttegiqD 330
                 44455555555444444..6666644.6666666665666666666666666665555444444444444442 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.076
      AAA_16  28 llsGesGvGKss 39 
                 l+sG +G+GK+s
  KHJ33640.1 638 LFSGKRGMGKTS 649
                 89*********8 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.0    0.0064       8.9       2      32 ..     171     201 ..     170     208 .. 0.79
   2 !    7.5   0.0    0.0029         4     106     167 ..     219     289 ..     209     290 .. 0.77
   3 ?   -2.6   0.2       3.6     5e+03      63      73 ..     498     508 ..     458     545 .. 0.44

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0064
                 EEEEBTTTTHHHHHHHHHTS--S---SSS-- CS
   Dynamin_N   2 avvGsqSsGKSSvlnaLlgedilprgpnptT 32 
                 +++G  + GKSS+l +++++d+ +     tT
  KHJ33640.1 171 LICGYPNVGKSSFLRSITRADVDVQPYAFTT 201
                 6899999***********9998665555555 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0029
                 EE---B-SSSGTTS.....HHHHHHHSTTEEEEEEEETTS-CCC-..CHHHHHHHHSTTBTT..EEEEEE- CS
   Dynamin_N 106 vDlPGldsvnkrdq.....elvkeyikkadiilavtsanhdlsns..ealflarevdpkgkr..tivvltk 167
                 +D+PG+ + + +++     + ++ +++ +++il+ ++ + ++  s   + +l ++++p   +  +++v++k
  KHJ33640.1 219 IDTPGILDHPLEEMntiemQSITAIAHLRSVILYFMDLSEQCGYSvqAQMQLFKSIKPLFANklVFIVINK 289
                 9*******999999778766666666**********99997655522666777888888777777777777 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 3.6
                 --CHHHHHHHH CS
   Dynamin_N  63 edfsevreeie 73 
                 e+ + +r+e +
  KHJ33640.1 498 EKCQLIRNEAK 508
                 22222222222 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00036      0.49       1     123 [.     170     338 ..     170     347 .. 0.69
   2 ?   -2.5   0.1       4.6   6.3e+03      27      74 ..     496     550 ..     487     570 .. 0.57
   3 ?    1.4   0.1       0.3   4.1e+02       2      13 ..     638     649 ..     637     650 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00036
                 EEEESSTTSSHHHHHHHHHHH.............H........THEEEEEETTTCSSS...............................STTHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavake.............l........gvefleisgsellsk...............................yvgesekkir 47 
                 +l++G p +GK+++ +++ +              l          +f  i+ + +l++                                 g s +   
  KHJ33640.1 170 LLICGYPNVGKSSFLRSITRAdvdvqpyafttksLfvghfdykYLRFQAIDTPGILDHpleemntiemqsitaiahlrsvilyfmdlseQCGYSVQAQM 268
                 5899***************99766655554433313333332225577777777776578888888888888899999999999999996677777777 PP

                 HHHHHHHHTS..TSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESS.GGGSTHHHHSTT CS
         AAA  48 elfkeakeka..kpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnr.pdkldpallrgR 123
                 +lfk++k     k + ++i  id + +++       +++++ qL   l+  + +   + + ++t++ ++++++a   +R
  KHJ33640.1 269 QLFKSIKPLFanKLVFIVINKIDVMRPED------LDNETQTQLQDLLKSSDVE--MLQLSCTTTEgIQDVKNAAC-DR 338
                 77777665556457***********8888......6677777777777777663..33444444444777776666.55 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 4.6
                 EEEETTTCSSS.STTHHHHHHHHHHHHHHHTS......TSEEEEEETGGGHHHHH CS
         AAA  27 leisgsellsk.yvgesekkirelfkeakeka......kpsilfiDEidalaksr 74 
                 ++ ++  ++++  +++s k+ + + ++a +k+      +   l +D  d + ++r
  KHJ33640.1 496 IREKCQLIRNEaKMKKSLKNRAIIPRTATRKNlsdmekQLDTLGFDTTDIISRTR 550
                 5555555553324444555555555555555556666333777788888888888 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.3
                 EEESSTTSSHHH CS
         AAA   2 llyGppGtGKTl 13 
                 l++G  G+GKT+
  KHJ33640.1 638 LFSGKRGMGKTS 649
                 89*********7 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00048      0.66       2     119 ..     170     291 ..     169     292 .. 0.63
   2 ?   -3.1   0.1       6.5     9e+03       3      14 ..     638     649 ..     636     649 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00048
                 EEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-S.....GGCTTTT-HHHH....CTSCEEEEEEE..G CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaG.....qerfrslhplyl....reaalailvyd..s 89 
                 ++++G  +vGK+s+l+++++ +++ +  +     f+tk++  + ++    + k ++++  Dt G      e++++++   +    + ++++++++d  +
  KHJ33640.1 170 LLICGYPNVGKSSFLRSITRADVDVQPYA-----FTTKSL-FVGHF----DYKYLRFQAIDTPGildhpLEEMNTIEMQSItaiaHLRSVILYFMDlsE 258
                 6899***************9999877544.....444443.22222....3467889999999955443366666543322111134556666667633 PP

                 H...HHHCHHHHHHHHHHHCSSS-EEEEEE-TT CS
         Roc  90 r...ssenlkeWlkelkkvagkspvilvgnkiD 119
                 +   s +   + +k++k    ++ v++v+nkiD
  KHJ33640.1 259 QcgySVQAQMQLFKSIKPLFANKLVFIVINKID 291
                 322233555678888888889999999999998 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 6.5
                 EEESSTTSSHHH CS
         Roc   3 vlvGdsgvGKts 14 
                 ++ G+ g+GKts
  KHJ33640.1 638 LFSGKRGMGKTS 649
                 67799******8 PP

>> Astro_capsid_N  Astrovirus capsid protein precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   4.3    0.0042       5.8       1      47 [.     578     623 ..     578     637 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0042
  Astro_capsid_N   1 GkarskararsqsrgrdkkvkvvvnsrnkakrvPkkdkrqksrkvrn 47 
                     Gk r+k+rarsqs  rd  v     +r ka r  k ++r+ +r  r+
      KHJ33640.1 578 GKMRAKSRARSQSNRRDDGVTNEL-ARSKAERAQKLSQRKMNRMARQ 623
                     899***************998877.8999999888888888887775 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0    0.0029         4       3      42 ..     149     190 ..     148     207 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0029
      AAA_23   3 kienfrsf..rdqeidFskgltlItGpNGaGKTTildAikla 42 
                  +  +r++  r  +id +    lI+G    GK+++l+ i+ a
  KHJ33640.1 149 YLDQVRQHlgRLPSIDPNTRTLLICGYPNVGKSSFLRSITRA 190
                 56678888745567************************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (651 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1132  (0.0631379); expected 358.6 (0.02)
Passed bias filter:                      578  (0.0322383); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.42
# Mc/sec: 4690.52
//
Query:       KHJ33641.1  [L=746]
Description: putative extracellular serine-rich protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.12   12.3   0.1       0.84    9.5   0.3    2.2  2  Polysacc_deac_1  Polysaccharide deacetylase


Domain annotation for each model (and alignments):
>> Polysacc_deac_1  Polysaccharide deacetylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.16   2.8e+03      28      43 ..     104     119 ..      96     129 .. 0.85
   2 ?    9.5   0.3   4.7e-05      0.84      63      93 ..     446     476 ..     440     486 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.16
                      HHHCT--EEEEE-HHH CS
  Polysacc_deac_1  28 Lkkykvkatffviggl 43 
                      L+ y+++  +fvi+++
       KHJ33641.1 104 LNGYGIPSEIFVIPKN 119
                      889**********987 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 4.7e-05
                      E--SS--EGGGSHHHHHHHHHHHHHHHHHHH CS
  Polysacc_deac_1  63 nHtinhsnlkrlseeevrreierakdalrka 93 
                      +Ht++h++ ++ + ++v +ei +++  ++++
       KHJ33641.1 446 SHTFTHEDQNNATYHDVSKEISWNRAWMNQV 476
                      7************************999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (746 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       378  (0.0210832); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.40
# Mc/sec: 5556.37
//
Query:       KHJ33642.1  [L=460]
Description: putative udp-glucose 4-epimerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.2e-35  120.2   0.1    4.8e-32  111.3   0.1    3.0  1  Epimerase        NAD dependent epimerase/dehydratase family
    2.6e-33  115.8   0.0    2.9e-31  109.1   0.0    3.2  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
    5.3e-08   32.3   0.0    1.1e-07   31.4   0.0    1.4  1  NAD_binding_4    Male sterility protein
    1.6e-07   30.6   0.3    5.7e-06   25.5   0.1    2.4  2  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
    1.8e-07   30.6   0.0    0.00035   19.8   0.0    3.0  2  Polysacc_synt_2  Polysaccharide biosynthesis protein
      0.001   18.4   0.0     0.0015   17.8   0.0    1.2  1  Pyr_redox_2      Pyridine nucleotide-disulphide oxidoreductas
  ------ inclusion threshold ------
      0.014   14.9   0.0      0.023   14.1   0.0    1.4  1  adh_short        short chain dehydrogenase
      0.016   15.1   0.0      0.057   13.3   0.0    1.8  1  KR               KR domain
      0.018   14.6   0.0      0.035   13.7   0.0    1.4  1  UDPG_MGDP_dh_N   UDP-glucose/GDP-mannose dehydrogenase family
      0.019   15.2   0.0      0.037   14.2   0.0    1.4  1  YpM              Yersinia pseudo-tuberculosis mitogen
       0.13   12.1   0.0       0.22   11.4   0.0    1.4  1  3HCDH_N          3-hydroxyacyl-CoA dehydrogenase, NAD binding
       0.18   11.4   0.0       0.27   10.8   0.0    1.2  1  DAO              FAD dependent oxidoreductase
       0.18   12.0   0.0       0.35   11.0   0.0    1.4  1  NAD_binding_2    NAD binding domain of 6-phosphogluconate deh
       0.19   12.0   0.0       0.37   11.0   0.0    1.5  1  TrkA_N           TrkA-N domain


Domain annotation for each model (and alignments):
>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.3   0.1   3.8e-35   4.8e-32       1     241 []      77     385 ..      77     385 .. 0.84

  Alignments for each domain:
  == domain 1  score: 111.3 bits;  conditional E-value: 3.8e-35
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC.................EEEE--TT-HHHHHHHHHH................HT-S CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl.................elveldltdrsalerlfke................eqpd 66 
                 i V+G+ G+iGs+++ +ll++gy+v+ +d+ s+++ t +++ l                 +++e+d++d++++++++++                 ++ 
  KHJ33642.1  77 IAVVGGLGYIGSHTCLELLRAGYNVLIIDNMSNSFDTTHDQILylarqyhkargqkvpqlSFYEADYRDEAKIREILSDytspilktpdmtqapnSRIV 175
                 689********************************99998888*****************999999999998888887622222222222111112455 PP

                 EEEE--S---HHHHHHSHHHHHHHHTHHHHHHHHHHHHHTCTEEEEEEEGGGGT................SCSS....SSBSTCSTTS--..--SSHHH CS
   Epimerase  67 avihlAavggvaassedpadfieknlqgtlnlleaarkagvkrllflsSsevYG................kdae....qpkeettltgpl..kpnspYa 143
                  vih+Aa+++v +s+e+p +++++n+ g  + +  +++ ++k ++f sS++vYG                + +e    q    +t++ p     ++pY+
  KHJ33642.1 176 GVIHFAAYKSVVESIENPLKYYDNNVSGLIKFCIILKEFNIKTFIFSSSATVYGskansevllreehcvhQ-TEsyydQFGIFKTNE-PGcsGLTNPYG 272
                 7*****************************************************99999998888877641.222322223334422.3347899**** PP

                 HHHHHHHHHHHHHHHHH.T-EEEEEEESEEESTT.......S-TTSTTSHHHHHHHHHHTTS.SSEEEET.......TST-EEEEEEHHHHHHHHHHHH CS
   Epimerase 144 aaKlageklveayaaqy.glnaiilrlfnlyGpr.......ngegevsrvipalirkilegk.qevtllg.......dgtalRdflyveDvaeaillvl 226
                 ++K ++e ++ ++a +  ++ +++lr+fn +G         ++ g +++++p ++ ++ +g+ + + ++g       dgta+Rd+++v D+a++++ + 
  KHJ33642.1 273 RSKWMSEAILSDIATADsDWAITALRYFNPIGCDgsgllgeDPRGIPTNLMP-VVMRVISGQiPGINIFGadypnthDGTAVRDYIHVTDLARGHISAF 370
                 *************99999**************99999*99778888******.555666777788888888899999********************** PP

                 HHHTT-STTEEEEES CS
   Epimerase 227 ehvdagdkgeiyniG 241
                 e   + +  ++yn+G
  KHJ33642.1 371 ESAVERKGFRTYNLG 385
                 **99988889***98 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.1   0.0   2.3e-34   2.9e-31       2     331 ..      79     447 ..      78     448 .. 0.71

  Alignments for each domain:
  == domain 1  score: 109.1 bits;  conditional E-value: 2.3e-34
                    EETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGC.....CEEEEE--TT-HHHHHHHHHHH................T- CS
  GDP_Man_Dehyd   2 iTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeelee.....nlklhkgDltDssslerllaev................qp 76 
                    + G+ G+iGs+++  Ll+ gy+v +i++ s+sf+t++ + l+  ++ ++ +     +l+++++D +D+++++++l+++                ++
     KHJ33642.1  79 VVGGLGYIGSHTCLELLRAGYNVLIIDNMSNSFDTTHDQILYLARQYHKARgqkvpQLSFYEADYRDEAKIREILSDYtspilktpdmtqapnsRI 174
                    78********************************997766654444333222223389******************98777777666666555567 PP

                    SEEEE--S---HHHHTTSHHHHHHHHTHHHHHHHHHHHHCT..TTSEEEEEEEGGGG-S-S..SSSB-TTS----..................... CS
  GDP_Man_Dehyd  77 devynLAAqshVdvsfekPeytaevnvlGtlrLLeairalglekkvrfyqaStsEvYGkvq..evpqtEttpfyP..................... 149
                      v+++AA + V +s+e+P +++++nv G ++   + ++ +++    f+++S+++vYG+ +  ev  +E++ ++                      
     KHJ33642.1 175 VGVIHFAAYKSVVESIENPLKYYDNNVSGLIKFCIILKEFNIK---TFIFSSSATVYGSKAnsEVLLREEHCVHQtesyydqfgifktnepgcsgl 267
                    78**********************************9999885...7************9734666788755444444555666666677788999 PP

                    -SHHHHHHHHHHHHHHHHHHHH---EEE.EEE-E..........EESTTS-TTSCCCHHHHHHHHHHTTS-C-EEC.T.TTT-EEEEEEHHHHHHH CS
  GDP_Man_Dehyd 150 rsPYaaaKlyadwivvnyreayglfavn.gilfn..........hesprrgetfvtrkitravarialgkqevlyl.G.nldakRdwghvkDyvea 232
                    ++PY+ +K +++ i  ++  a   +a++  ++fn           e pr     +  +++++v+r+  g+ + +++ G +  ++ d + v+Dy+++
     KHJ33642.1 268 TNPYGRSKWMSEAILSDIATADSDWAITaLRYFNpigcdgsgllGEDPR----GIPTNLMPVVMRVISGQIPGINIfGaDYPNTHDGTAVRDYIHV 359
                    *******************998766554389***999955444444444....4555555566666666655444433133345555555555555 PP

                    HHHHHHCSS-.--EE.E-TT-EEECHHCHHCCHHCCCHHHHHH............TTGGCCCEECGG--SS--SB--B-THHHHHHH----SS-HH CS
  GDP_Man_Dehyd 233 mwlmlqqdkp.edyv.iatgethsvrefvelaflelgktiewegkgeeevgrakesgkvvvevdpkyfrpgevdlllgdaskakeeLgWkpkvsfe 326
                     +l+  + ++ e  v     +t+++++ +  ++ ++ +              +++    +++++ +++r+g+v++ ++ +++a  eL Wk + s++
     KHJ33642.1 360 TDLARGHISAfESAVeRKGFRTYNLGSGIGYSVRDIIQA-------------VEKVFCCKIPTQIAPRRKGDVEMSVALPKRAGDELKWKTEKSLN 442
                    554222211101111012233444444444444443332.............22333457889999****************************** PP

                    HHHHH CS
  GDP_Man_Dehyd 327 elvre 331
                    + +++
     KHJ33642.1 443 DACKD 447
                    99987 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   8.2e-11   1.1e-07      25     192 ..     118     287 ..      79     300 .. 0.68

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 8.2e-11
                    EEEEE-SSSHHHHHHHHHHHT-SS-HHHHHHH.............HHTTTEEEEE--TTSGGGG--HHHHHHH.HHH--EEEE--SS-S.STTSSE CS
  NAD_binding_4  25 iyllvRaksgesaeeRleeelekkelfsallk.............elaerikvveGDlseprlGLseedlqel.aeevdviihsaAtvnfdepyke 106
                    i  l+R+  ++                                  + + +i+ +  D + p l  +  d+ +   +++  +ih aA  +++e++++
     KHJ33642.1 118 ILYLARQYHKAR-------------------GqkvpqlsfyeadyRDEAKIREILSDYTSPIL--KTPDMTQApNSRIVGVIHFAAYKSVVESIEN 192
                    333333332211...................11233444445555678899999999999995..5555555546888899***********9998 PP

                    ...EHHHHHHHHHHHHHHHTSSS--.-EEEEEEGGGTTS-TTT--SSS-H...............HHH--EEEETTTCCCHHHHHHHHHHHHHHHH CS
  NAD_binding_4 107 ...llrvNveGtrevlelakklkklkvllhvSTayvngeregeveekvyeege.........keekldederaklkglpntYeqsKalaEklvrea 190
                        ++ Nv G  + + + k+ + + ++++ S+a+v+g + +  +e +++e++         ++    ++++    gl+n Y +sK+++E ++ + 
     KHJ33642.1 193 plkYYDNNVSGLIKFCIILKEFNIK-TFIFSSSATVYGSKAN--SEVLLREEHcvhqtesyyDQFGIFKTNEPGCSGLTNPYGRSKWMSEAILSDI 285
                    5557788999999999999999888.*******999999995..355555555788888988777777777778899***************9987 PP

                    HH CS
  NAD_binding_4 191 rr 192
                    + 
     KHJ33642.1 286 AT 287
                    64 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.1   4.5e-09   5.7e-06       1     140 [.      78     247 ..      78     260 .. 0.78
   2 ?   -3.7   0.0       3.6   4.7e+03     206     229 ..     347     370 ..     342     376 .. 0.82

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 4.5e-09
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrleelkevrvlD...............................lrespelleelskvnvkkviegDvtdkdkleealegvd 68 
                 +v+Gg G++G++ + eL+r++   +v ++D                                  +   ++e++  ++ +  +  +++++++++a ++  
  KHJ33642.1  78 AVVGGLGYIGSHTCLELLRAG--YNVLIIDnmsnsfdtthdqilylarqyhkargqkvpqlSFYEADYRDEAKIREILSDYTSPILKTPDMTQAPNSRI 174
                 59*******************..5999*****************9999999888777666322233344455544555567778999999999998866 PP

   3Beta_HSD  69 v.vihlaslvdvag.kltedeimkvnvkGTrnvleacvkagvrvlvYtSsaevvgpnslgeeilngdEeleyes 140
                 v vih a++  v     +  ++++ nv G  +     ++ +++++++ Ssa v g   ++e +l  +E+  +++
  KHJ33642.1 175 VgVIHFAAYKSVVEsIENPLKYYDNNVSGLIKFCIILKEFNIKTFIFSSSATVYGSKANSEVLL-REEHCVHQT 247
                 669******999883556679********999999999******************66666666.556555443 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 3.6
   3Beta_HSD 206 igdeevlsdrvYvgNvawahilAa 229
                 + d  ++ d++ v  +a  hi A 
  KHJ33642.1 347 THDGTAVRDYIHVTDLARGHISAF 370
                 567788999999999999999886 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   2.7e-07   0.00035       1     128 [.      77     224 ..      77     238 .. 0.69
   2 !    5.5   0.0    0.0064       8.2     135     177 ..     268     308 ..     265     310 .. 0.93

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 2.7e-07
                      EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH.........-TTEEEE....E....--TT-HHHHHHHTT........T-SE. CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeieke...leeelkkkklkveivpvi....gdvrdkerlekaleel......kvdv. 80 
                      + v G+ G iGs+ + ++l+   + +i +++  ++ ++ +++   l    + +k + + vp +    +d rd+++++++l+++      ++d+ 
       KHJ33642.1  77 IAVVGGLGYIGSHTCLELLRAGYNVLI-IDNMSNSFDTTHDQilyL--ARQYHKARGQKVPQLsfyeADYRDEAKIREILSDYtspilkTPDMt 167
                      568899999999999999998876555.455555555555554432..2233333333344332222788888888888877622222212223 PP

                      .........EEE------HHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEE CS
  Polysacc_synt_2  81 .........vfhaAAlKhVPlveenpleaiktNvlgtenvieaaieagvkkvvliSt 128
                               v+h AA+K V    enpl+  ++Nv g  + + + +e ++k++++ S+
       KHJ33642.1 168 qapnsrivgVIHFAAYKSVVESIENPLKYYDNNVSGLIKFCIILKEFNIKTFIFSSS 224
                      3333344449**********999******************************9886 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0064
                      -SHHHHHHHHHHHHHHHGGG--SSS--EEEEEEE-EETTGTTS CS
  Polysacc_synt_2 135 tnvmGatKrlaekllqalakeseekktkfvvvRfGNVlgSrGS 177
                      tn +G +K ++e +l  +a+    ++ ++++ R+ N +g  GS
       KHJ33642.1 268 TNPYGRSKWMSEAILSDIATAD--SDWAITALRYFNPIGCDGS 308
                      799*************999988..789*************999 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.2e-06    0.0015     142     197 ..      68     130 ..      43     160 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.2e-06
                  T......SEEEEES-.SHHHHHHHHHHHHHT-EEEEEESSSSSSTTS-HHHHHHHHHHHHHTT CS
                  x......xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 142 p......krivvvGg.GyiGvElAaalaklgkevtlveardrllraldkelsaaleealekeG 197
                  p      + i+vvGg GyiG+ ++ +l ++g++v +++ +++   ++ +++   ++++++++G
   KHJ33642.1  68 PvyfpeeNFIAVVGGlGYIGSHTCLELLRAGYNVLIIDNMSNSFDTTHDQILYLARQYHKARG 130
                  34444656689***99****************************8888888888888888887 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   1.8e-05     0.023       3      51 ..      77     125 ..      75     156 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.8e-05
                 EEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEE CS
   adh_short   3 vlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegaka 51 
                 + v+G+ + IG  ++ el+++G++v+++d+ ++   ++++++  +++++
  KHJ33642.1  77 IAVVGGLGYIGSHTCLELLRAGYNVLIIDNMSNSFDTTHDQILYLARQY 125
                 789******************************9999999987664444 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   4.5e-05     0.057       5     145 ..      79     232 ..      76     237 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 4.5e-05
                 EETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHH......HHHHHHHTT-......EEEE----TT-HHHHHHHHHHHH........HHS...S CS
          KR   5 itGGlGgLGlelarwlaekgarhlvllsRsaaadedska......liaelealga......evevvaaDvsdkdavealleeik........aee...p 80 
                 ++GGlG +G +++  l++ g + l++   s++ d ++++      + ++     a      + ++++aD  d+++++++l++++         ++   +
  KHJ33642.1  79 VVGGLGYIGSHTCLELLRAGYNVLIIDNMSNSFDTTHDQilylarQYHK-----ArgqkvpQLSFYEADYRDEAKIREILSDYTspilktpdMTQapnS 172
                 89***********************976665444444442222112222.....133344678889999999999999977654111111111112347 PP

                 ---EEEE---------TTT--HHHHHHHHTTTTHHHHHHHHHTTTS--SEEEEEEEHHHHH--TT CS
          KR  81 pikGvihaAgvlrdklleemtaedleqvlapKvkGawnLhelledesldffvlfSSiagllgsag 145
                 +i Gvih A       +e  + e+  + +   v+G+     +l++ +++ f+ fSS a+++gs+ 
  KHJ33642.1 173 RIVGVIHFAAYKS--VVE--SIENPLKYYDNNVSGLIKFCIILKEFNIKTFI-FSSSATVYGSKA 232
                 8999999997643..333..34455667788888888888888888888887.566677777765 PP

>> UDPG_MGDP_dh_N  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.7e-05     0.035       3      41 ..      77     116 ..      76     143 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.7e-05
                     EEEE.--STTHHHHHHHHHHCTSEEEEE-S-HHHHHHHCT CS
  UDPG_MGDP_dh_N   3 isvi.GlGYvGlvtaavlaeighevigvDideekvdklns 41 
                     i+v+ GlGY+G  t++ l ++g +v+++D+ ++  d+ + 
      KHJ33642.1  77 IAVVgGLGYIGSHTCLELLRAGYNVLIIDNMSNSFDTTHD 116
                     5666379**********************98887776655 PP

>> YpM  Yersinia pseudo-tuberculosis mitogen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   2.9e-05     0.037      64     113 ..     188     238 ..     164     242 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.9e-05
         YpM  64 ndidkplkyedyytsgls.wiwkiknnssetsnysldatvhddkedsdvlt 113
                 + i++plky d   sgl  +   +k+ + +t  +s  atv+  k +s+vl 
  KHJ33642.1 188 ESIENPLKYYDNNVSGLIkFCIILKEFNIKTFIFSSSATVYGSKANSEVLL 238
                 5799************9615566799999********************96 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00017      0.22       2      48 ..      77     124 ..      76     156 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00017
                 EEEE--.SCCHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHHHHHHC CS
     3HCDH_N   2 vaviGa.GtmGagiaavfasagleVvlvdiseealekalekiekslek 48 
                 +av+G  G +G+     +++ag++V ++d  +++ ++ +++i    ++
  KHJ33642.1  77 IAVVGGlGYIGSHTCLELLRAGYNVLIIDNMSNSFDTTHDQILYLARQ 124
                 7899866***********************999999999998763333 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00021      0.27       2      70 ..      77     146 ..      77     161 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00021
                 EEEECT.SHHHHHHHHHHHHTT..EEEEESSSSTTSSGGGSSEEEEESSSSTHHSTHHHH.HHHHHHHHHHHH CS
         DAO   2 vviiGG.GiiGlstAyeLarrg..VtllekgdiagsgaSgrnsgllhsglrylpeasela.rlslealeelre 70 
                 ++++GG G+iG+ t +eL r+g  V++++  +  +  +++     l+ +++ ++ + +++ +ls++  ++++e
  KHJ33642.1  77 IAVVGGlGYIGSHTCLELLRAGynVLIIDNMSN-SFDTTHDQILYLARQYH-KARG-QKVpQLSFYEADYRDE 146
                 7899988***********999********9844.44888888888888776.4445.5555777777666655 PP

>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00027      0.35       6      43 ..      82     119 ..      77     136 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00027
                    --SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTTE CS
  NAD_binding_2   6 GlGvMGsnmalnllkagykvavynrtkekveelvaega 43 
                    GlG +Gs+ +l+ll+agy+v +++  ++++++  ++ +
     KHJ33642.1  82 GLGYIGSHTCLELLRAGYNVLIIDNMSNSFDTTHDQIL 119
                    8***********************99999998887764 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00029      0.37       2      39 ..      79     116 ..      77     130 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00029
                 EEES-SHHHHHHHHHHHH.TTEEEEEEESSHHHHHHHHH CS
      TrkA_N   2 iiiGlGrvGrslaeeLse.ggkdvvvidkdeerveelre 39 
                 ++ GlG +G++ + eL + g+ +v++id+  + +++  +
  KHJ33642.1  79 VVGGLGYIGSHTCLELLRaGY-NVLIIDNMSNSFDTTHD 116
                 7889*************9777.6******9888877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (460 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 3349.52
//
Query:       KHJ33643.1  [L=132]
Description: putative glycosyl transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       687  (0.0383178); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 996.56
//
Query:       KHJ33644.1  [L=503]
Description: putative zinc finger protein zpr1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   9.7e-113  373.3   0.1    1.7e-58  197.0   0.0    2.2  2  zf-ZPR1         ZPR1 zinc-finger domain
  ------ inclusion threshold ------
      0.012   15.7   3.4        1.4    9.0   0.5    2.6  2  zf-RRPl_C4      Putative ribonucleoprotein zinc-finger pf C4 
        2.4    8.5   4.4         25    5.2   0.9    2.9  2  Ribosomal_L32p  Ribosomal L32p protein family


Domain annotation for each model (and alignments):
>> zf-ZPR1  ZPR1 zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.4   0.0   2.5e-55   1.5e-51       1     159 []      70     226 ..      70     226 .. 0.95
   2 !  197.0   0.0   2.8e-62   1.7e-58       2     159 .]     290     454 ..     289     454 .. 0.92

  Alignments for each domain:
  == domain 1  score: 174.4 bits;  conditional E-value: 2.5e-55
     zf-ZPR1   1 slCpsCgkengetrllltkiPyfkeviimsfeCehCgyknnevksageieekGkritlkveseedlnrqvlkSetatveipeleleippgtlegrlttv 99 
                 slC++C+ e+g+trlllt+iPyf+evi++sf C+hC +kn+ev+ agei++kG++++l++++ edl+rqv+kS+t++v++ el++eipp   +g+lt+v
  KHJ33644.1  70 SLCMNCH-EDGVTRLLLTRIPYFREVILSSFFCPHCFFKNSEVQAAGEIQPKGCKYELRLTTLEDLARQVVKSDTCRVTFIELDVEIPP--GRGQLTNV 165
                 58****7.99*******************************************************************************..9******* PP

     zf-ZPR1 100 EGlLeqikeelekeegdqaer.ed..eekekieeflekleeliegee.pftlildDpagnSfie 159
                 EGlL+ i e+l   e +q+er e+  +   ki+e++ k + +ieg + pf l +dDpagnS+ie
  KHJ33644.1 166 EGLLRMILEDL---ELHQPERkEKliDVWVKINEIILKGNMMIEGASfPFRLEIDDPAGNSWIE 226
                 ***********...677888864457899***************9978**************96 PP

  == domain 2  score: 197.0 bits;  conditional E-value: 2.8e-62
     zf-ZPR1   2 lCpsCgkengetrllltkiPyfkeviimsfeCehCgyknnevksageieekGkritlkveseedlnrqvlkSetatveipeleleippgtlegrlttvE 100
                 +Cp C  + ++t++++++iP+fk+v+ims++C+hCgy++nevk++ge++ekGk+itl ve+++dl+r++lkSe++++e+pel+l+++pgtl+gr+ttvE
  KHJ33644.1 290 TCPGCT-KYCVTHMKMVEIPHFKQVVIMSTVCDHCGYRSNEVKTGGEVPEKGKKITLMVEDPSDLARDILKSESCALECPELSLSVNPGTLGGRFTTVE 387
                 7****5.99****************************************************************************************** PP

     zf-ZPR1 101 GlLeqikeeleke......egdqaer.ed.eekekieeflekleeliegeepftlildDpagnSfie 159
                 GlL+q++++l+++      ++d+a++    e+ e++++f+ kl+e+i+g+ +ft+il+Dp+g+S+++
  KHJ33644.1 388 GLLTQVRDDLHQHifnfgdNEDNANDsLPsETIETWTTFFGKLDEAIKGNLKFTVILTDPLGSSYVQ 454
                 **********9445665554444444533589*********************************97 PP

>> zf-RRPl_C4  Putative ribonucleoprotein zinc-finger pf C4 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.1    0.0013         8      39      91 ..      56     109 ..      33     116 .. 0.82
   2 ?    9.0   0.5   0.00024       1.4       6      64 ..     273     329 ..     269     339 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0013
  zf-RRPl_C4  39 lvpikelekislrdkLCtkCkeknekeke.ircetfeeylkklklCkeCkerve 91 
                 + p k+ + + + + LC +C+e   +     r   f+e +    +C +C  ++ 
  KHJ33644.1  56 YSPEKDQKVVEEIESLCMNCHEDGVTRLLlTRIPYFREVILSSFFCPHCFFKNS 109
                 56677888899999********9999777567788999999999**99976665 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00024
  zf-RRPl_C4   6 yClskklknlnetvy...CeaCeiyfkvknekqkvelvpikelekislrdkLCtkCkeknek 64 
                  C s+++   + + +   C+ C+ y       +++++v+i  ++++ + ++ C++C  + ++
  KHJ33644.1 273 ICESNEIVPDEVYSFpatCPGCTKYCV-----THMKMVEIPHFKQVVIMSTVCDHCGYRSNE 329
                 577777766443333555999999988.....78899999999*************988776 PP

>> Ribosomal_L32p  Ribosomal L32p protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.014        83      30      53 ..      89     111 ..      76     114 .. 0.83
   2 ?    5.2   0.9    0.0042        25      23      49 ..     301     327 ..     294     332 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.014
                     TTTCCEECTTC-BTTTTBSSSBXS CS
  Ribosomal_L32p  30 pncgelklpHrvcpscGyYkgrev 53 
                     p  +e++l+   cp+c + k+ ev
      KHJ33644.1  89 PYFREVILSSFFCPHC-FFKNSEV 111
                     56678999999*****.***9998 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0042
                     ---EEEETTTCCEECTTC-BTTTTBSS CS
  Ribosomal_L32p  23 apnlvecpncgelklpHrvcpscGyYk 49 
                       ++ve p  +++ +  +vc +cGy  
      KHJ33644.1 301 HMKMVEIPHFKQVVIMSTVCDHCGYRS 327
                     5578999999*************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (503 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       681  (0.0379832); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 3638.74
//
Query:       KHJ33645.1  [L=564]
Description: putative trna splicing endonuclease subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (564 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1426  (0.0795359); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.61u 0.31s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 3972.43
//
Query:       KHJ33646.1  [L=452]
Description: putative subunit of the trna splicing endonuclease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-24   85.6   0.0    5.2e-24   84.2   0.0    1.8  1  tRNA_int_end_N2  tRNA-splicing endonuclease subunit sen54 N-t
     0.0023   17.6   0.0     0.0059   16.3   0.0    1.7  1  tRNA_int_endo_N  tRNA intron endonuclease, N-terminal domain


Domain annotation for each model (and alignments):
>> tRNA_int_end_N2  tRNA-splicing endonuclease subunit sen54 N-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.2   0.0   5.9e-28   5.2e-24       1      72 []      73     164 ..      73     164 .. 0.95

  Alignments for each domain:
  == domain 1  score: 84.2 bits;  conditional E-value: 5.9e-28
  tRNA_int_end_N2   1 hdalsyeRvhsskslvraiwf....................prdrvvvvespkarGkhfktmGvs.ra.rrgrlwLlpeEaLYLvErGsldirw 72 
                      hdal++ R h +k+++r+++                     ++d+vv ve  +arG+hfk mG++  + ++ +lwLlpeEaLYLvErG ld++w
       KHJ33646.1  73 HDALAHIRSHAPKNHIRGFYYgdkrcanrekmfekqfrhglEDDHVVLVE--SARGPHFKIMGKMtTKsNNPKLWLLPEEALYLVERGFLDLWW 164
                      89************************************************..56*********885355999*********************9 PP

>> tRNA_int_endo_N  tRNA intron endonuclease, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   6.6e-07    0.0059      31      61 ..     139     170 ..     111     174 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 6.6e-07
                      CCTSSEEEEHHHHHHHHHTTSEEEE.TTSEEE CS
  tRNA_int_endo_N  31 lidepLqLslvEAlYLlekGklevv.kggepl 61 
                       ++ +L L ++EAlYL+e+G l++   ++e+ 
       KHJ33646.1 139 SNNPKLWLLPEEALYLVERGFLDLWwPSEESF 170
                      5667899***************9877777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.37
# Mc/sec: 3698.80
//
Query:       KHJ33647.1  [L=324]
Description: putative ribose 5-phosphate isomerase a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-45  153.3   0.0    2.3e-44  151.0   0.0    2.0  1  Rib_5-P_isom_A  Ribose 5-phosphate isomerase A (phosphoribois


Domain annotation for each model (and alignments):
>> Rib_5-P_isom_A  Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.0   0.0   1.3e-48   2.3e-44       2     162 ..      67     278 ..      66     290 .. 0.90

  Alignments for each domain:
  == domain 1  score: 151.0 bits;  conditional E-value: 1.3e-48
                     EEESSHHHHHHHHHTT--BE-GGCC...............................SSEEEEEE--SEEETTS-EE--TTS-HHHHHHHHHTEEE CS
  Rib_5-P_isom_A   2 gvptSeqteelaeelgipllsldev...............................eeidlaiDGaDevdedlnliKGgGgallrEKivaaaakk 65 
                     +vpt++q+++l+ e+g+pl s+d++                               e++d+a+DGaDe+de+ln+iKGgG++l++EK+va++akk
      KHJ33647.1  67 FVPTGHQSKQLIIEAGLPLGSIDSLppvkaqeteikpgevinvatgvtdlglkgkrESLDVAFDGADEIDEELNCIKGGGACLFQEKLVATSAKK 161
                     7***************************************************99988************************************** PP

                     EEEEEEGGGBESSTT.S.S-EEEEE-GGGHHHHHHHHHHTTT-EEEE-TE.TTTTEE-B-TTS-EEEEEESSSBSS...SH.............. CS
  Rib_5-P_isom_A  66 fiviadesKlveklg.k.fpvPveVlpfaleavarelekllggkpelRea.kgkdgpvvTdngnlilDvkfeekie...dp.............. 140
                     fi++ad++Kl ++l  + +++P+e+ p ++ +++r l +l   +p++R++ ++k+gpvvTdng +i+D+ f + ++   d+              
      KHJ33647.1 162 FICVADYRKLQPRLLsAwQSIPIEIAPTSAPTIKRILITLGSSDPKIRQGgSAKAGPVVTDNGMWIVDAPFPP-LAlkkDLkgsdpgdgslgtwe 255
                     *************66358*****************9998867999****98889*****************44.422344356666999999998 PP

                     .HHHHHHHHTSTTEEEESEE-S- CS
  Rib_5-P_isom_A 141 .eelekelksipGVvetGlFlgl 162
                      ++l ++lk+i+GV+e+GlF+g 
      KHJ33647.1 256 vDNLGRRLKRIVGVLEVGLFYGR 278
                     89******************984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       298  (0.0166211); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.21s 00:00:00.64 Elapsed: 00:00:00.36
# Mc/sec: 2713.06
//
Query:       KHJ33648.1  [L=545]
Description: putative translation initiation factor eif-2b subunit gamma [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-07   30.0   5.2    0.00084   19.0   0.6    3.7  4  Hexapep          Bacterial transferase hexapeptide (six repea
    3.4e-05   23.0   4.1    8.8e-05   21.6   4.1    1.6  1  Fucokinase       L-fucokinase
     0.0057   14.9   0.5     0.0088   14.2   0.5    1.2  1  DUF4954          Domain of unknown function (DUF4954)
  ------ inclusion threshold ------
      0.027   14.1   0.0      0.041   13.5   0.0    1.2  1  NTP_transferase  Nucleotidyl transferase
      0.045   14.1   0.0       0.14   12.5   0.0    1.9  2  NTP_transf_3     MobA-like NTP transferase domain
       0.12   12.5   0.0       0.27   11.4   0.0    1.5  1  DUF5554          Family of unknown function (DUF5554)
        7.1    6.5  11.0         46    3.9   4.9    3.7  3  Hexapep_2        Hexapeptide repeat of succinyl-transferase


Domain annotation for each model (and alignments):
>> Hexapep  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.7   4.3e-06     0.011       2      34 ..     429     460 ..     422     462 .. 0.88
   2 !   19.0   0.6   3.3e-07   0.00084       2      28 ..     446     477 ..     445     479 .. 0.94
   3 !   13.9   0.2   1.3e-05     0.034       2      32 ..     463     492 ..     462     496 .. 0.88
   4 ?    4.0   0.0     0.018        45       2      31 ..     480     508 ..     479     510 .. 0.65

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4.3e-06
                 EEEETTEEE-TTEEEETTEEE-TTEEEETTEEE CS
     Hexapep   2 tvIGsnvlIgpfaviggnVkIGdnvkIgagvvi 34 
                 + I +nv++   +vi   ++IG n+ I +g+++
  KHJ33648.1 429 CLIAENVIVEEKSVI-KECVIGANCQIKSGARL 460
                 778999999999999.8888**********987 PP

  == domain 2  score: 19.0 bits;  conditional E-value: 3.3e-07
                 EEEETTEEE-T.....TEEEETTEEE-TTEEE CS
     Hexapep   2 tvIGsnvlIgp.....faviggnVkIGdnvkI 28 
                 +vIG n++I +      ++++++V+IG+++k+
  KHJ33648.1 446 CVIGANCQIKSgarliRCILMEDVIIGKGCKL 477
                 89****************************95 PP

  == domain 3  score: 13.9 bits;  conditional E-value: 1.3e-05
                 EEEETTEEE-TTEEEETTEEE-TTEEEETTE CS
     Hexapep   2 tvIGsnvlIgpfaviggnVkIGdnvkIgagv 32 
                 +++ ++v+Ig+++++  ++++G+++ Ig+ +
  KHJ33648.1 463 CILMEDVIIGKGCKL-TGCILGKHSNIGEDS 492
                 67789**********.***********9865 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.018
                 EEEETTEEE-TTEEEETTEEE-TTEEEETT CS
     Hexapep   2 tvIGsnvlIgpfaviggnVkIGdnvkIgag 31 
                 +++G+++ Ig  +++  ++++ +n  I+ag
  KHJ33648.1 480 CILGKHSNIGEDSIL-QDCEVQENLLIEAG 508
                 566777777777777.77777777777766 PP

>> Fucokinase  L-fucokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   4.1   3.4e-08   8.8e-05     261     339 ..     427     503 ..     382     532 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 3.4e-08
  Fucokinase 261 saiknkkekk.......kesavvinSvlessvsvgegsviehsslkgnvsigsnsivsglelesseeslelpddtilqtlslklsk 339
                 s++              +e++v+ ++v+  +++++ g+ +  + l ++v ig+++ + g+ l ++++   + +d+ilq  +++++ 
  KHJ33648.1 427 SDC------LiaenvivEEKSVIKECVIGANCQIKSGARLIRCILMEDVIIGKGCKLTGCILGKHSN---IGEDSILQDCEVQENL 503
                 333......033334479999******************************************9877...**********999875 PP

>> DUF4954  Domain of unknown function (DUF4954)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.5   3.5e-06    0.0088     214     279 ..     437     502 ..     404     528 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.5e-06
     DUF4954 214 keapveiGegViledfiissGskikdgavisrcfvGqavklkkqfsaedsllfaNcqgengEavai 279
                  e+ + i e Vi  ++ i+sG+++    +++++++G+++kl+     + s +++ + ++ +E+  +
  KHJ33648.1 437 VEEKSVIKECVIGANCQIKSGARLIRCILMEDVIIGKGCKLTGCILGKHSNIGEDSILQDCEVQEN 502
                 344556677777777777777777777777777777777777777777777777777777776544 PP

>> NTP_transferase  Nucleotidyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.6e-05     0.041      20     144 ..      33     162 ..      13     165 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.6e-05
                      SSGGGSEETTETETTHHHHHHHHHTT-SEEEEEEETTTHHHHHHHHTTSGGGT...SEEEEEEESS--....BGGHHHHH..THHHHTTSSE.. CS
  NTP_transferase  20 lakklvpvlgkerliqatlsrlansgieeiivvltqehsflveeqlkegskfg...vevlialepegk....gtAdAval..aaelledeksde 104
                      + +k+++   + +++ ++++ + + gi++i ++  +  ++ +   l+++ +++   +    +l p g     +tA+ ++l  ++e+++ ++   
       KHJ33648.1  33 MNPKALLLIANRPMVWYPIEFCYRMGITNITLIAPPSSAPAIMVALNTNRHLTsfgLPKPNLLAPDGLdqntNTAQIFRLpqVREIIK-SD--- 122
                      667777777666**********************999999988888877766645544444444544467677888776521333333.33... PP

                      EEEEETTEEEESTTHHHHHHHHHTHSSTT.SEEEEEEESS- CS
  NTP_transferase 105 lvlvLggDhlikdayeeavkkaiekaakg.tvtfgivpvee 144
                       ++vL+ D++++   e +++  + k+ ++  v+f   + ++
       KHJ33648.1 123 -FIVLPCDIVCELGGESLLELWMGKETNIgSVAFTRGKSDR 162
                      .7******************999999999888887776665 PP

>> NTP_transf_3  MobA-like NTP transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   5.4e-05      0.14       1      53 [.      14      73 ..      14     166 .. 0.81
   2 ?   -2.8   0.0       2.7     7e+03      15      43 ..     370     396 ..     369     410 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 5.4e-05
                  EEEEEESS-TTT.......TT.THHHHCCCCCCHHHHHHHHHCTT.-CEEEEECSHCHHHH CS
  NTP_transf_3  1 aviLAGGrSsRm.......gg.dKallplggkpllervldalraagvdevvvvggdeevla 53
                  a+iL+G  +s +          +Kall ++++p++++ ++   ++g+ ++++++++++  a
    KHJ33648.1 14 AIILCG-PGSSFptfttnpDMnPKALLLIANRPMVWYPIEFCYRMGITNITLIAPPSSAPA 73
                  678884.4444434444332259*******************************9976655 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.7
                   THHHHCCCCCCHHHHHHHHHCTT.-CEEE CS
  NTP_transf_3  15 dKallplggkpllervldalraagvdevv 43 
                   +K+  +++  pll+ v  +l+++  + + 
    KHJ33648.1 370 NKLIRRVDSAPLLRSVSLQLAKL--ESID 396
                   79999999999999999999887..4444 PP

>> DUF5554  Family of unknown function (DUF5554)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0    0.0001      0.27      41      68 ..     110     137 ..      99     141 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0001
     DUF5554  41 yllpgvghilrtnfpvlpcvsschligg 68 
                 + lp v  i++++f vlpc   c l g 
  KHJ33648.1 110 FRLPQVREIIKSDFIVLPCDIVCELGGE 137
                 679********************99775 PP

>> Hexapep_2  Hexapeptide repeat of succinyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1       1.3   3.4e+03      23      32 ..     428     437 ..     427     443 .. 0.62
   2 ?    3.9   4.9     0.018        46       6      26 ..     444     477 ..     444     480 .. 0.65
   3 ?    2.9   0.0     0.036        92       3      29 ..     481     508 ..     479     509 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.3
                 T-EE-TT-EE CS
   Hexapep_2  23 ncvvgaGvvi 32 
                 +c ++ +v++
  KHJ33648.1 428 DCLIAENVIV 437
                 5666666665 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.018
                 TT-EE-TT-EE..S...........EEE-TT-EE CS
   Hexapep_2   6 dnCliGanagi..G...........vslGdncvv 26 
                 + C+iGan+ i  G           v++G++c++
  KHJ33648.1 444 KECVIGANCQIksGarlircilmedVIIGKGCKL 477
                 5799999998877444444333334888888875 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.036
                 EE-TT-EE-TT-EE.SEEE-TT-EE-TT CS
   Hexapep_2   3 iIGdnCliGanagi.GvslGdncvvgaG 29 
                 i G+ ++iG +++    ++ +n  ++aG
  KHJ33648.1 481 ILGKHSNIGEDSILqDCEVQENLLIEAG 508
                 5688899999888778888888888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (545 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       240  (0.0133861); expected 358.6 (0.02)
Passed bias filter:                      229  (0.0127726); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.37
# Mc/sec: 4411.62
//
Query:       KHJ33649.1  [L=613]
Description: putative adenosine deaminase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-23   84.0   0.0    3.7e-23   82.4   0.0    1.7  1  A_deaminase  Adenosine/AMP deaminase
  ------ inclusion threshold ------
      0.012   15.8   0.0       0.03   14.5   0.0    1.7  1  CxC7         CxC7 like cysteine cluster associated with KDZ t


Domain annotation for each model (and alignments):
>> A_deaminase  Adenosine/AMP deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.4   0.0   4.2e-27   3.7e-23       5     320 ..     151     583 ..     146     592 .. 0.85

  Alignments for each domain:
  == domain 1  score: 82.4 bits;  conditional E-value: 4.2e-27
                  EEEEEECCCSS-HHHHHHHHHHHCHT..SS-SCCCCCCCCHC.HCCHHHHCCHCCCHHCCCHHHT................................. CS
  A_deaminase   5 vdlHvHldgclnpktllrlakkkgikeldekvveedeklltl.qekfesLkeflydlsvdvlvlh................................. 68 
                  ++lH+H+++cl+ + l +la++k+      +   +  +++ l q  f  + ++ +   ++++ ++                                 
   KHJ33649.1 151 AHLHIHFNSCLSANFLVHLARNKDAMYISSTLPLTTTENMALaQISFMVMTLHEATHIINSEGVEvlvplgnvweedyipnswmpyekfhtqfdpydk 248
                  79*******************99988777776655555555415577888888888888888888999****************************** PP

                  ........................................................CCCCCCHHHHHHCCCCCHCTTCCCCCCCCSHHHHH....... CS
  A_deaminase  69 ........................................................wlievvrllavekakdlakdfvkylevifsPlfea....... 103
                                                                            + ++rl++ ++++d+++d  +y+e++  P f+        
   KHJ33649.1 249 wtgkgknyglertlaaetwlvekiqfsedeahnskqtcngiwekfnhrtkmmkglfAYESAFRLYTDACIRDFVEDNIQYAEIR--PNFMKsnslkkd 344
                  *******************************************************99999**********************86..999999999999 PP

                  ....HH-GCSTCCHHHHCCCCCCCCCCHCCT-..EEEEEECCETT..TCCGHCCCHH...HHHHCCCCCCCCCCCCC-TTSTTGGG.....HHHHHCC CS
  A_deaminase 104 ....tagpqlpelevvlkvvdgfdsvedeskv..kerlilvksrk..peewseeine...lasyyrdytvvnldllndekiepasl.....flklrae 185
                      ++g q   + v ++ ++ +++ ++e k     ++i +  r+   e+++ ++ne   l  +y+d  + ++dl + e+++   +     fl+ r++
   KHJ33649.1 345 dgngSIGNQGILEIVKDQTNKTINELQKEGKFfgGLKVIYCTPRSfqREQVAYALNEcieLKRKYKD-LICGFDLVGHEEKGNQLRlfipeFLDFRKK 441
                  9998777665555566778888888888866522568888888889866666555550005555666.9********988877766799999999999 PP

                  CCHTT-E..EEEEESSS....S-CH.HHHHHHHCS--SCECE-GGGGGSHHHHHHHHHCT-EEEE-HHHHCCCSST-TTTT-CHHHHHHTT-EEEE-- CS
  A_deaminase 186 agkstll..ltpHaGEa....ggle.hvveAllllkaerigHGvrlrkdpvLqyllalaqiplevcPlSNvalgafleyaenPlkeflerglnvslnt 276
                    +++l   +  H+GE+    g+++  + +A+ll +a+rigHG+ l+  p L++ l ++ i +e cP+SN  lg    ++ + l+ +l ++++ ++n+
   KHJ33649.1 442 CKEEGLDipFLFHCGETlihgGKVDgNLYDAILL-NAKRIGHGYCLARHPLLMEILKKKGIAIESCPISNEILGLTSVISGHHLPILLANNVPCTVNS 538
                  999987622689****8555334434799**998.*************************************************************** PP

                  BSCCCCT-SHHHH.HHHHHHHHT--HHHHHHHHHHHHHCSSS-HH CS
  A_deaminase 277 DDPlqfgttLiee.YaiaaqvfklseedlaelarNsvkqsflsad 320
                  D+    +++L+++ Y+++      + + +++la+ s+  s + a+
   KHJ33649.1 539 DNASFYKSSLSHDfYQVMIGSEAMTLQGWKQLAIWSLDHSCMGAN 583
                  ***********9956777777789999999999999999987665 PP

>> CxC7  CxC7 like cysteine cluster associated with KDZ transposases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   3.4e-06      0.03      11      58 ..     392     442 ..     387     446 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.4e-06
        CxC7  11 kefrvPfsliecsecgdifkdspvGy..vGdGrkGv.lrgfyst.idiPGyc 58 
                 +e +v ++l ec e  +++kd   G+  vG+  kG  lr f  + +d+   c
  KHJ33649.1 392 RE-QVAYALNECIELKRKYKDLICGFdlVGHEEKGNqLRLFIPEfLDFRKKC 442
                 44.699***************98898779*****962555544324555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.23s 00:00:00.80 Elapsed: 00:00:00.38
# Mc/sec: 4832.33
//
Query:       KHJ33650.1  [L=530]
Description: putative 3-ketosteroid reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0071   15.8   0.0      0.096   12.1   0.0    2.6  3  adh_short  short chain dehydrogenase


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0     0.029   5.2e+02       2      22 ..      19      39 ..      18      49 .. 0.88
   2 ?   -2.7   0.0      0.19   3.4e+03      75      87 ..     183     195 ..     144     210 .. 0.62
   3 !   12.1   0.0   5.3e-06     0.096      95     141 ..     257     309 ..     243     337 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.029
                EEEEESTTSHHHHHHHHHHHH CS
   adh_short  2 vvlvtGassGIGraiakelak 22
                +vlvtGa + +G+ i+ +++ 
  KHJ33650.1 19 IVLVTGARGYLGQGISTRIID 39
                69******9999999988765 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.19
                 HSSESEEEE---S CS
   adh_short  75 lgkldvLvnNAGi 87 
                 l ++dv+   AGi
  KHJ33650.1 183 LPRIDVILFTAGI 195
                 3777888888887 PP

  == domain 3  score: 12.1 bits;  conditional E-value: 5.3e-06
                 GCSHHHHHHHHHHHTHHHHHHHHHHHHHHH......HCTTEEEEEEEEGGGTS CS
   adh_short  95 elseeewervievNltgvflltravlpaml......kqssGrIvnvsSvagkv 141
                 +l+e    +v+  Nl+g +ll+++++p +       +q++G+I+ vsS+a++ 
  KHJ33650.1 257 NLDEPPLGEVFCSNLFGQYLLAHELMPLLSqpptsdAQHGGKIIWVSSIATHG 309
                 5555557789999***************999999999************9864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.59
# Mc/sec: 2697.79
//
Query:       KHJ33651.1  [L=1002]
Description: putative heat shock protein 70-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-61  208.4   7.4    1.6e-58  198.4   0.8    3.3  3  HSP70          Hsp70 protein
     0.0041   16.0   0.6      0.053   12.3   0.1    2.7  3  MreB_Mbl       MreB/Mbl protein
  ------ inclusion threshold ------
      0.085   12.5   0.4       0.29   10.8   0.1    2.0  2  Peptidase_M22  Glycoprotease family


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  198.4   0.8   2.6e-62   1.6e-58       1     396 [.      26     465 ..      26     479 .. 0.85
   2 !   22.8   0.9     4e-09   2.4e-05     494     594 ..     656     762 ..     637     767 .. 0.85
   3 ?   -5.4   9.8       1.3   7.9e+03     485     582 ..     892     993 ..     789    1001 .. 0.56

  Alignments for each domain:
  == domain 1  score: 198.4 bits;  conditional E-value: 2.6e-62
                 EEEEEEXSSEEEEEEEETTEE.EEEXXTTSXSSEESEEEEXT.......T..SEEETHHHHHCTTTTGGGEEEXGGGTTTXBTTSHHHHHHH.TTXSSE CS
       HSP70   1 viGiDLGttnsvvavmeggki.evianeegnrttPsvvaFtk.......k..erlvGeaAkrqavtnpkntvfsvKrliGrkfsdpevqkei.kelpyk 88 
                 viGiDLGt++   ++++ g + +++  + ++r   s +aF++       k  er+ G+ A   a + p ++  ++K l+G+  +++ v++   ++   k
  KHJ33651.1  26 VIGIDLGTEYIKATIVKPGIPlDIVLTKDSRRKELSAIAFKPeknlksgKfpERVYGSDAMALASRFPGDVYPNLKVLLGHGTENSIVKEYAlRHPKLK 124
                 79************999886439*****************973333333234578899999999999*****************999987541566678 PP

                 EEEET.TSBEEEEEEE..TTE.EEEHHHHHHHHHHHHHHHHHHHHTSB..EEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCC CS
       HSP70  89 vvkke.ngkavvevea..age.kftpeqisamvLkklketaeaylgkk..vtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldk 181
                 v++++ +g a  + ea  a+e ++t e+i am L++++++a+a  gk   ++d+vit+P++++ ++++a+  A+++AGL+vl ++ +  A+++ Y   +
  KHJ33651.1 125 VETQNvKGTAAFKSEAflAEEiSWTVEEILAMELQNVQKNAQALAGKGssIKDCVITIPPFYTIEEKRAILLAANLAGLHVLELISDGLAVGINYATTR 223
                 87664145555555431145599********************9987555*********************************************9988 PP

                 SS.......SCEEEEEEEEXSSXEEEEEEEEE......TTEE.......EEEEEEEETTXSHHHHHHHHHHHHHHHH.....HHHHSX...XGGGSHHH CS
       HSP70 182 kd.......kernvlvyDlGggtfdvSilele......kGvf.......evkaTagDthlGGedfDealvehlveef.....kkkegi...dlskdkka 252
                 +        k ++ l++D+G g++++S+l+++       G f       +v++   D +lGG+ f + +v+ +v++f      kk++i    l++d k+
  KHJ33651.1 224 TFsninnggKAETHLIFDMGAGSTKASVLKFQgrtvkdIGRFnktiqeiKVLGNGWDRTLGGNLFNSLIVNDMVTQFmtspaAKKKSInahALKNDGKV 322
                 877888999999******************98433333354433333337999*****************99999983333334556633357899*** PP

                 HHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTT CS
       HSP70 253 lqrlkeaaekaKkeLSsskqteinleietvdedgkdlseklsRakfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfg 351
                 + +l+++aek ++ LS+  +++++  +e + e + d++ k++R +fe+++e  + r+ ++++kal  a+l+ +++d+v+l GG++R P vq  ++ ++g
  KHJ33651.1 323 MAKLEKEAEKSRQILSA--NANTQTFFEGLYE-DIDFKYKITRVEFEKMAEAHVGRISQAIQKALDAAGLRIKDLDSVILHGGASRTPFVQRELERFIG 418
                 *****************..6777788999*99.9***************************************************************** PP

                 ..CHHBSSSHTTTHHHHHHHHHHHHHCTCGCSHCCEEEEBESS-EEE CS
       HSP70 352 ..kepsktvnpDeavaiGAAvqagvlsgeeevkdllllDvtpLslgi 396
                    +++++vn De    GA + ++ ls++++vk++ + D +    g+
  KHJ33651.1 419 dvNKLKTNVNSDESAVFGAGFRGATLSPSFRVKEIRVYDCMNYPSGV 465
                 9999***********************************98844444 PP

  == domain 2  score: 22.8 bits;  conditional E-value: 4e-09
                 EEEECCSSSBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...GGGSTHHHH......HHHHHHHHHHHCHTTSSCHHHHHHHH CS
       HSP70 494 itieaseglseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslekkleee...aekvseaek......ekvesaieeLkeeleeeekeeieakt 583
                  +i+   +l+++ei +m +   +++++d+ ++ + ea n++e++ y++++ l+e    a   +   +      +k +++ +++++ ++e+++ee+++++
  KHJ33651.1 656 TEIKGRPQLPASEISRMKERLAAFSSSDNLRRLRDEALNQLESFTYKVRDLLDEPdfiAASTE---QerttieSKSKDTSDWIYSGGTEASREEFRERL 751
                 46788889*********************************************9955322222...1345777888899999****9************ PP

                 HHHHHHHHHHH CS
       HSP70 584 eelkkvvekia 594
                 ++l++++++i 
  KHJ33651.1 752 QDLQEAISPIE 762
                 *****998875 PP

  == domain 3  score: -5.4 bits;  conditional E-value: 1.3
                 ETTTCCEEEEEE....ECCSSSBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHH..HHHHHHHHHHHCHTTSSCHH CS
       HSP70 485 dketgkeeeiti....easeglseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslekkleeeaekvseaek..ekvesaieeLkeeleeeeke 577
                 +++t+  +e +i    +++++ls+   ++m k + +s+e+  +++++iea+ +++++ +  +++++   e v+++++  e++++ +++ + +++e++k+
  KHJ33651.1 892 EEKTKSLQEANIrllvKNMQRLSKV-RNSMTKTKYKSHESTDEAEKSIEAESSSKTT-DIPRATFTFGDESVPSEAEmqEHLRKLESHKEGKVSESDKK 988
                 3333333333320000233333222.2233333333333333333333333322222.11111222122233322222233333333333333333333 PP

                 HHHHH CS
       HSP70 578 eieak 582
                 + ++k
  KHJ33651.1 989 KKQKK 993
                 32222 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.31   1.8e+03       3      22 ..      26      45 ..      24      63 .. 0.77
   2 !   12.3   0.1   8.8e-06     0.053      90     168 ..     172     258 ..     149     283 .. 0.76
   3 ?    0.3   0.0      0.04   2.4e+02     231     306 ..     354     430 ..     323     443 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.31
                EEEEEE-SSEEEEEETTTEE CS
    MreB_Mbl  3 dlgiDLGtantlvyvkgkgi 22
                 +giDLGt  + + +   gi
  KHJ33651.1 26 VIGIDLGTEYIKATIVKPGI 45
                69******887766665555 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 8.8e-06
                 -SS--EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT-.....-TT...SSS-EEEEEE-SS-EEEEEEETTEEE CS
    MreB_Mbl  90 slskprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGagl.....pve...epsgnmvvdiGggttevavislggiv 168
                   s +  vi++P   t  e+rA+  aa+ aG +  +li++ la  i         +++   +++ +++ d+G+g+t+ +v+ ++g +
  KHJ33651.1 172 GSSIKDCVITIPPFYTIEEKRAILLAANLAGLHVLELISDGLAVGINYATtrtfsNINnggKAETHLIFDMGAGSTKASVLKFQGRT 258
                 44567789**********************************98886432122224543337899****************988754 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.04
                 CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHHH-EEEESGGGGS....BTHHHHHHHHHSS-EEE-SS CS
    MreB_Mbl 231 lpkevevsseevrealkepvsaiveavkevLektppeLaadivdrgivltGGgall....kgldkllseetglpvkvaed 306
                 +  + +++  e +++ + +v +i +a++++L+++   + +d+   +++l GG++      ++l++++ +  +l+++v +d
  KHJ33651.1 354 IDFKYKITRVEFEKMAEAHVGRISQAIQKALDAAGLRI-KDL--DSVILHGGASRTpfvqRELERFIGDVNKLKTNVNSD 430
                 455678999999999****************9876443.454..468888888864222256777777777777766555 PP

>> Peptidase_M22  Glycoprotease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   4.8e-05      0.29      23      54 ..     366     397 ..     363     400 .. 0.93
   2 ?   -2.1   0.0      0.42   2.5e+03     190     226 ..     783     823 ..     683     833 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 4.8e-05
                    HHHHHHHHHHHHHHHHHHHHHHTSTGGGEEEE CS
  Peptidase_M22  23 elasraHserllplieealaeaglsledldaI 54 
                    e+ ++aH+ r+ ++i++al++agl+++dld +
     KHJ33651.1 366 EKMAEAHVGRISQAIQKALDAAGLRIKDLDSV 397
                    57799*************************88 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.42
                    HHHSTT......HHHHHHHHHHHHHHHHHHHHHHHHHHCTBSE CS
  Peptidase_M22 190 keleke......vedlaasfqeavvdhlvekteralklpkake 226
                    ke+  +      +e++a   +e+ v++l++ + +  ++p+++e
     KHJ33651.1 783 KET--KqliltiTEQIANDTKEHTVTDLTSQSLKPTESPSVEE 823
                    111..12233445556666666666666555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1002 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1830  (0.102069); expected 358.6 (0.02)
Passed bias filter:                      496  (0.0276647); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.82u 0.31s 00:00:01.12 Elapsed: 00:00:00.46
# Mc/sec: 6507.45
//
Query:       KHJ33652.1  [L=772]
Description: putative glycerol-3-phosphate o-acyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.9e-13   48.0   0.0    1.1e-11   44.4   0.0    2.2  1  Acyltransferase  Acyltransferase


Domain annotation for each model (and alignments):
>> Acyltransferase  Acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.4   0.0   6.3e-16   1.1e-11       7     133 ..      52     293 ..      46     295 .. 0.91

  Alignments for each domain:
  == domain 1  score: 44.4 bits;  conditional E-value: 6.3e-16
  Acyltransferase   7 lenlpekgpailvaN.Hqsy.lDvlllwlllyksngprnvviiakkellsipllgflmrllgfifidR.......................... 72 
                      + ++p+kgp+ilva  H    +D+l+l+  l +   +r  ++ia+k+  + +l+g+++r++g++++ R                          
       KHJ33652.1  52 SWKVPRKGPIILVAApHANQfVDPLILMKTLRTDCRRRASFLIAAKS-MDKWLIGWFARKVGAMPVARaldmvraadgtiympepdddpllirg 144
                      5578999**999875499989**********6555336666666666.556******************************************* PP

  Acyltransferase  73 ...................................................................................ksnaraagsle 83 
                                                                                                           + ++ ++++
       KHJ33652.1 145 fgtkfgtnqakvgdllvlptvhgiaanaeigeiisfeelrlkkpfrdraaitqltqkidcedsgvekladssgtvfkgssykiAPKVDQTKVYD 238
                      *****************************************************************************99999866677788889 PP

  Acyltransferase  84 niselleegklvviFPEGtrsregellpfkkGlvrlaakak.....kgvpivPva 133
                       + ++l++g  v+iFPEG+    +ellp k+G++ +a+ a       ++ i+P++
       KHJ33652.1 239 AVFDRLRSGGAVGIFPEGGSHDRTELLPLKAGVAIMALGALaadpdSNLKIIPCG 293
                      9999*********************************999999999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (772 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.41
# Mc/sec: 5666.42
//
Query:       KHJ33653.1  [L=415]
Description: putative peroxin-22-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       710  (0.0396006); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2972.52
//
Query:       KHJ33654.1  [L=458]
Description: putative ubiquinol-cytochrome-c reductase complex core protein mitochondrial precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-13   51.3   0.1      2e-13   50.5   0.1    1.3  1  Peptidase_M16    Insulinase (Peptidase family M16)
    3.5e-11   43.4   0.0    6.6e-11   42.5   0.0    1.5  1  Peptidase_M16_C  Peptidase M16 inactive domain
  ------ inclusion threshold ------
      0.011   14.9   0.3      0.059   12.5   0.0    2.1  3  M16C_assoc       Peptidase M16C associated


Domain annotation for each model (and alignments):
>> Peptidase_M16  Insulinase (Peptidase family M16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   0.1   3.4e-17     2e-13       9     137 ..      57     184 ..      50     193 .. 0.85

  Alignments for each domain:
  == domain 1  score: 50.5 bits;  conditional E-value: 3.4e-17
                    SSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSCHHHHHHHHHHTTCEEEEEEESSEEEEEEEEEGGGHHHHHHHHHHHHHSBTTSHHH CS
  Peptidase_M16   9 paktsavglvvdaGSryepkdlnGlAHllehmafkgTkkypsnklaeeleklGgslnAttsrentvYyvevlskdlekaldvladvfkaplleese 104
                      +t +++++ +aG ry +    G+A  l  +afk+T+k+++ ++++e e lGg+l++  +re  +  +++l++dl+   ++l++v+ +++++  e
     KHJ33654.1  57 AGPTTRLAVFAKAGTRYQTAP--GIAAGLSLFAFKNTNKRTALRITRESELLGGQLKSHHDREFVMLEAKFLRQDLPFFTELLSEVISETRFTTYE 150
                    5678899**********9875..************************************************************************* PP

                    HHHHHH.HHHHHHHHHCCHHHHHHHHHHHHHHTT CS
  Peptidase_M16 105 vererk.vvekeveavdaepekvveenlhaaayr 137
                    +e+++   ++   + +  + ++v+++  h+ a+ 
     KHJ33654.1 151 FEEQVApLLKLSQKRFTGNASEVALDVAHNVAFH 184
                    ***8875555555556666677777777766666 PP

>> Peptidase_M16_C  Peptidase M16 inactive domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   1.1e-14   6.6e-11       6     180 ..     207     378 ..     202     380 .. 0.83

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 1.1e-14
                      HHHHHHHHHSSGGGEEEEEEESS-HHHHHHHHHHHHTTSTHHSHCSGSCTSSSSSGGGSSEEEEEEEESSSSSEEEEEEEEEECT.CTHTTHHH CS
  Peptidase_M16_C   6 dlkefykkfYrpenmvlaivGdvdheelvkliekyfgdlkaskappakptgepltpatlkkppvvlkkldeeqahlslafegpsk.endeddla 98 
                       + ++    Y+ +n+ +++ G  d +el k++ ++f ++++     +  +++p    ++ +++ ++++     +++ +a++g s  + +     
       KHJ33654.1 207 TISQYSGIAYSKKNIAIIVNG-ADMDELAKWVGEFFTGVPSG---VSALSDKPT---KYYGGEERVHHPT--GNSIVIAYPGSSMlNGPSYTPE 291
                      5555555579***********.******************54...444444444...4777777777777..7************555555667 PP

                      HHHHHHHHHSS......TTSHHHHHHHTTTTSESEEEEEEEEESSCEEEEEEEEEECTTHHHHHHHHHHHHHHHHHHTS-HHHHHHHH CS
  Peptidase_M16_C  99 lavlntlLggg......mesrLytnlrekeglaysvsafndsyrdsglfgisatadpenveevvevilkelrklkkeglteeelerak 180
                      + vl+ lLgg         ++L  + + ++ +  s + ++  y+dsgl++i++ + pe + ++   ++k+l+++++ ++t+e+l++a+
       KHJ33654.1 292 IFVLAALLGGQstikwtKGFSLLAQAT-SHIPHLSTVTSHFAYSDSGLLSIHLNGSPEALRQASLEVKKTLKRVAEGQFTKEDLTKAI 378
                      88899999999******8888888888.888877777777789999***************************************998 PP

>> M16C_assoc  Peptidase M16C associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   9.9e-06     0.059     162     222 ..     116     179 ..     102     188 .. 0.82
   2 ?   -0.9   0.1      0.12   7.1e+02     131     161 ..     383     412 ..     379     437 .. 0.80
   3 ?   -2.1   0.0      0.28   1.6e+03      19      57 ..     412     451 ..     402     452 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 9.9e-06
  M16C_assoc 162 eegfvlsgkaLdrnvekmfeLlreilletkfdd...kerlkelvkesksrlensiassGhsyAm 222
                 +e+++l++k L + ++  +eLl+e++ et+f+    +e+   l+k s++r + + ++    +A 
  KHJ33654.1 116 REFVMLEAKFLRQDLPFFTELLSEVISETRFTTyefEEQVAPLLKLSQKRFTGNASEVALDVAH 179
                 67999**************************998888999999888888877766666555555 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.12
  M16C_assoc 131 yeeleqeiklktGGisasvsvssspedldky 161
                 ++ l++ ++ k G +s+++s+  ++++ + +
  KHJ33654.1 383 FKALDDAQNVKVGLLSTGTSILHNQKTYQ-F 412
                 78899999**********99999988655.3 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.28
  M16C_assoc  19 LaakkaslseeekekiveetkeLkerQekpds.edlscLP 57 
                  +++ ++++  + + +   +++L  ++++ ++  dl++LP
  KHJ33654.1 412 FEEIGKTITSVNADSLKVAAQKLLTKKATVSTvGDLHMLP 451
                 5677777777788888889999999999999999999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       423  (0.0235931); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3474.38
//
Query:       KHJ33655.1  [L=305]
Description: putative mitochondrial carrier protein yhm1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.9e-30  103.0   1.3    1.2e-15   57.2   0.0    3.2  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   6.8e-07     0.012       4      95 ..      14     107 ..      11     109 .. 0.67
   2 !   28.0   0.1   8.8e-11   1.6e-06       9      92 ..     128     202 ..     120     206 .. 0.84
   3 !   57.2   0.0   6.5e-20   1.2e-15       3      91 ..     212     296 ..     210     299 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 6.8e-07
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS.STTTSCSSHHHHHHHHH.HHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkks.skksksaaildvlkkiy.keeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 s+l++l  +g ag+++  v +P+d++  rl++++++ +++s+ ++++ v k+ +   + +++l+ Gl+ +    + ++  k +   +++++l+k
  KHJ33655.1  14 STLARLSGSGSAGIAELAVFHPVDTIAKRLMSNQSKiKSASQLNSVIFVEKSSFpPGQKFLSLFPGLGYAAGYKVLQRIYKYGGQPFMRDFLTK 107
                 677889999***************9988888766661455554444444444442466677777777777766666666666666666666655 PP

  == domain 2  score: 28.0 bits;  conditional E-value: 8.8e-11
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   9 llaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrl 92 
                  +aG+l g+ + ++  Pldv+K++ qt+++  + +        + +i+k+eG+ glyrG+  +  r+ap s++ f+   ++k +
  KHJ33655.1 128 SCAGSLIGI-GEIILLPLDVLKIKRQTNPEAFRGR-------GVVRIVKDEGF-GLYRGWQWTAARNAPGSFALFGGSAFTKGY 202
                 455555554.68999*****************985.......4779******9.*********************998888865 PP

  == domain 3  score: 57.2 bits;  conditional E-value: 6.5e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkr 91 
                  s++++++a+  +++++ lv +Pldv+Ktr+q+ +  + +      +++++k++k+eG++++++G++p+ll++ p+ +  f+l +tl+ 
  KHJ33655.1 212 ASWYQNFIASISGASASLLVSAPLDVIKTRIQNRNFDNPEG----GFKIISKMIKNEGISSFFKGMVPKLLMTGPKLVFSFWLAQTLIP 296
                 6899*******************************999885....599*********************************99888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2457.00
//
Query:       KHJ33656.1  [L=757]
Description: putative mak10 subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.9e-59  197.8   1.3    1.5e-58  197.0   0.8    1.7  2  Mak10     Mak10 subunit, NatC N(alpha)-terminal acetyltransfe


Domain annotation for each model (and alignments):
>> Mak10  Mak10 subunit, NatC N(alpha)-terminal acetyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.0   0.8   8.5e-63   1.5e-58       2     166 ..      63     220 ..      62     222 .. 0.96
   2 ?   -4.1   0.0      0.53   9.6e+03      67      93 ..     697     725 ..     693     734 .. 0.70

  Alignments for each domain:
  == domain 1  score: 197.0 bits;  conditional E-value: 8.5e-63
       Mak10   2 gqlvkdesFtLfeavsAleimdpkmDsgliapeleeeeedfdvsapllpeevlgimdrllasemaWhsgssLsqTvftclYveklllpspkalkeakfs 100
                 gq+++d++FtLfe+v+Aleim++kmD+g+++ + e++e+++d+s++llpeev+gi+d+ll++emaWh+g++L+qT+ft+l+++++l+ ++++++ea+f 
  KHJ33656.1  63 GQIIQDSNFTLFESVGALEIMNKKMDTGYLELG-ETMEDNYDFSKELLPEEVIGIIDQLLSHEMAWHMGHPLAQTIFTSLHIDRILHLCTSSINEAYF- 159
                 8*****************************999.889************************************************************9. PP

       Mak10 101 rkedeekektelelvdkvLrayvlalvkfcdlvleelskevlyeeEDfvtnkyglslleeieveev 166
                      ++++t+  l+++ Lray+++l+k+c +v++++++e++yeeEDfv+++++++ll++ie + +
  KHJ33656.1 160 -----DQDTTSERLMHRTLRAYCFGLIKTCCYVYHRINAEHFYEEEDFVSHTFNRNLLKDIELTSI 220
                 .....4577899************************************************998776 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 0.53
       Mak10  67 Whsg..ssLsqTvftclYveklllpspka 93 
                 W ++  ++L+  +ft + + +++++ +++
  KHJ33656.1 697 WIKDikNTLKACIFTKITISNITNIVKAS 725
                 66666677888888888777777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (757 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       727  (0.0405488); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.38
# Mc/sec: 5973.53
//
Query:       KHJ33657.1  [L=73]
Description: putative mitochondrial atp synthase epsilon chain domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.5e-23   80.5   1.2    9.7e-23   79.9   1.2    1.3  1  ATP-synt_Eps  Mitochondrial ATP synthase epsilon chain


Domain annotation for each model (and alignments):
>> ATP-synt_Eps  Mitochondrial ATP synthase epsilon chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.9   1.2   5.4e-27   9.7e-23       1      49 []       3      51 ..       3      51 .. 0.99

  Alignments for each domain:
  == domain 1  score: 79.9 bits;  conditional E-value: 5.4e-27
                  --TTTTS--HHHHHHHHHHHCCHSS-TTT--CCCCCS----EEEE--TT CS
  ATP-synt_Eps  1 saWRaaglsYnkYsniaAravRraLKeelraaAekreetelkytkwenG 49
                  +aW+a gl+YnkY+++aAr+vRr+LK++++  Aekr+et+l+++kw+nG
    KHJ33657.1  3 FAWKASGLTYNKYLSVAARVVRRSLKDDKKLIAEKRGETQLRFAKWTNG 51
                  69**********************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.21s 00:00:00.54 Elapsed: 00:00:00.35
# Mc/sec: 625.20
//
Query:       KHJ33658.1  [L=312]
Description: putative peroxisomal membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-52  175.1   2.1    8.8e-17   60.8   0.0    3.0  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.2   0.1   5.8e-19     1e-14       5      95 ..      14     100 ..      10     102 .. 0.94
   2 !   60.8   0.0   4.9e-21   8.8e-17       2      95 ..     111     211 ..     110     213 .. 0.95
   3 !   58.8   0.3   2.2e-20   3.9e-16       4      91 ..     216     300 ..     213     306 .. 0.92

  Alignments for each domain:
  == domain 1  score: 54.2 bits;  conditional E-value: 5.8e-19
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                  l++ +aG+ +g+++  +t+Pl ++ tr q+++++++k+    +++++k i++ eG rgly Gl  +l++++++++++   ye+++  + k
  KHJ33658.1  14 NLAHAIAGAGGGILSMALTYPLITLSTRAQVESSRANKN----FVEAVKLIIRREGGRGLYAGLDSALFGISVTNFVYYYWYEFTRAGFEK 100
                 57899******************************9885....9*****************************************998876 PP

  == domain 2  score: 60.8 bits;  conditional E-value: 4.9e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS........HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   2 elsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa........ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrl 92 
                 +l+++++++aG++ag++++l+t+P++v+ tr+ t k++++k+ s          +ld+l  ++++eG ++l++G++p+l+ v+ +  l+ +++e+lk++
  KHJ33658.1 111 SLTTVESIIAGAIAGSATVLLTNPIWVINTRITTRKQNHTKNISLDhkfikipsTLDTLVALIRDEGPLALFSGVVPALVLVI-NPILQYTIFEQLKNI 208
                 678899*********************************99998889**********************************99.**************9 PP

                 HCT CS
   Mito_carr  93 llk 95 
                 l++
  KHJ33658.1 209 LTR 211
                 987 PP

  == domain 3  score: 58.8 bits;  conditional E-value: 2.2e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkr 91 
                 +++  +l G++++++at+vt+P  ++K r+ ++++++k+++   + +v+++i+ eeG  gl++G++p++++++ +sa  f++ ++l +
  KHJ33658.1 216 TPTLAFLLGAFGKLIATSVTYPYITIKSRMHVAGREGKTEG---MGKVMRSIINEEGYQGLFKGIGPKVIQSVLTSAFLFAFKDVLYE 300
                 566789*******************************9977...99***********************************9887755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       563  (0.0314016); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2234.84
//
Query:       KHJ33659.1  [L=75]
Description: hypothetical protein EV44_g0259 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.095   11.7   0.0      0.096   11.7   0.0    1.0  1  Peptidase_C2  Calpain family cysteine protease


Domain annotation for each model (and alignments):
>> Peptidase_C2  Calpain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   5.4e-06     0.096      49     108 ..       2      59 ..       1      70 [. 0.78

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5.4e-06
  Peptidase_C2  49 ikqGelgdCwllaaiasltlkekllkrvvpkeqsfee..kyaGifhfrfwrfgewvdvvvDD 108
                   i+q +l  C + + ia l  ++   + ++p+++++ee  k++G fh  fw   +  + ++DD
    KHJ33659.1   2 INQKSLIYCGISSGIALLMPTPAEADDIIPSKTTVEEkeKWMGNFH--FWTEPK--NFYIDD 59 
                   78999999************************99955135666665..665443..445555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (75 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       288  (0.0160634); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 566.17
//
Query:       KHJ33660.1  [L=349]
Description: putative serine threonine protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-55  188.4   0.0    2.2e-55  187.9   0.0    1.3  1  Pkinase         Protein kinase domain
    1.7e-20   73.4   0.0    3.2e-20   72.5   0.0    1.5  1  Pkinase_Tyr     Protein tyrosine kinase
    1.4e-07   31.1   0.0    2.3e-07   30.4   0.0    1.3  1  Kinase-like     Kinase-like
    2.6e-05   23.3   0.6    3.7e-05   22.8   0.6    1.5  1  Haspin_kinase   Haspin like kinase domain
    2.7e-05   24.2   0.0      0.014   15.3   0.0    2.1  2  APH             Phosphotransferase enzyme family
    0.00012   21.7   0.2    0.00069   19.3   0.0    2.1  3  RIO1            RIO1 family
    0.00039   19.3   0.0    0.00067   18.6   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase
  ------ inclusion threshold ------
      0.021   13.9   0.0      0.035   13.2   0.0    1.3  1  Seadorna_VP7    Seadornavirus VP7


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.9   0.0   9.9e-59   2.2e-55       2     263 ..      85     342 ..      84     343 .. 0.90

  Alignments for each domain:
  == domain 1  score: 187.9 bits;  conditional E-value: 9.9e-59
                 EEEEEEEEESSEEEEEEE.ETTTTEEEEEEEEECHCHCHHHH......HHHHHHHHHHHHHS.....CTTB--EEEEEEESSEEEEEEE--TTEB.... CS
     Pkinase   2 ekleklGeGsfGkVykav.eketgkivAvKkikkekakkkke......kkvlrEikilkklk.....hpnivrlyevfeekdelylvleyvegge.... 84 
                 + le++GeG++G+V  ++ +k++++++++K + k+++  ++        +v  Ei++l  l+     hpni+++ ++fe++ ++y   e v++g+    
  KHJ33660.1  85 VILEEIGEGAYGQVKLVRyKKDNNRKMVIKYVTKRRILIDTWtrdrrlGTVPLEIHVLDFLRqgglqHPNIIEMTDFFEDEINYY--IETVPHGQpgmd 181
                 6789**********99863678899**********9876666667888999******9977666677************999999..477777766777 PP

                 HHHHHHHHSS--HHHHHHHHHHHHHHHHHHH.HTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCB.SHHHHHH CS
     Pkinase  85 ladllerkgslseeeakkiakqilegleylH.skgiiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvlkeney.skkvDvW 181
                 l+d++e ++++ e+e+++i+ q+++++ +lH +++i+HrD+K+eNi +d++g++K++DFG a+ ++++  ++ fvgt ++ APE+l++++y +k+ DvW
  KHJ33660.1 182 LFDYIELRTNMGEDECRNIFVQVAQAICHLHtKASIVHRDIKDENIVLDREGKIKLIDFGSAAYIKNGP-FDVFVGTIDFAAPEILSGKPYrGKEQDVW 279
                 ******99***********************6677********************************99.***************************** PP

                 HHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGG CS
     Pkinase 182 slGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpy 263
                 +lG++ly++++++ pfs   +++    e+++             kl  ++ ++e+ ++l++ +l+++ ++R t+ee+l+h +
  KHJ33660.1 280 ALGILLYTIVYKEKPFS---TTD----EIME------------GKLGIPYVMNEDNLSLIRAMLDRNVESRATIEEVLEHAW 342
                 *****************...322....3333............356778999****************************99 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.5   0.0   1.4e-23   3.2e-20       3     210 ..      86     299 ..      84     344 .. 0.73

  Alignments for each domain:
  == domain 1  score: 72.5 bits;  conditional E-value: 1.4e-23
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST.......TSSHHHHHHHHHHHHHH...HTS..-BTTB--EEEEEESSSSEEEEEE--TTE.. CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlke.......eateeekeelleeakim...kkl..khpnivkllgvctkeepllivteyvkgG.. 86 
                  + +++GeGa+G+V   ++k   ++++ k ++K +++        +++++   +  e++++   ++   +hpni++++ +  +e +++i  e v++G  
   KHJ33660.1  86 ILEEIGEGAYGQVKLVRYK---KDNNRKMVIKYVTKrrilidtWTRDRRLGTVPLEIHVLdflRQGglQHPNIIEMTDFFEDEINYYI--ETVPHGqp 178
                  6799***************...66666777777654233322123333344555577776222443349***********97777665..66777766 PP

                  ..BHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT.EEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE CS
  Pkinase_Tyr  87 ..dLlkfLrkkekekltlkdllsfalqvAkGmeyLeskk.lvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk 181
                    dL ++++ +  +++  ++  ++ +qvA+++ +L++k  +vHrd+   N++l+++ ++k+ DfG a  i++       +     + + apE+l+ k 
   KHJ33660.1 179 gmDLFDYIELR--TNMGEDECRNIFVQVAQAICHLHTKAsIVHRDIKDENIVLDREGKIKLIDFGSAAYIKNG----PFDVFVGTIDFAAPEILSGKP 270
                  679*****998..99*********************986599****************************333....344566789************ PP

                  EE.HHHHHHHHHHHHHHHHTTSSGTTTTSH CS
  Pkinase_Tyr 182 ft.sksDvWsfGvllwEiftlgespypglk 210
                  +  ++ DvW+ G+ll+ i+   e+p+++ +
   KHJ33660.1 271 YRgKEQDVWALGILLYTIVY-KEKPFSTTD 299
                  973568************98.677875543 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0     1e-10   2.3e-07     142     288 .]     194     331 ..     180     331 .. 0.80

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 1e-10
  Kinase-like 142 etiarlllTlqlirlaanLqak.glvhgkftvdnllldekgglmlggftaLvragtkvvl.seve.kgfaPpEllgsrggytrknktkmthkldaWql 236
                  e+ +r +  +q+ + + +L+ k  +vh +++ +n++ld++g+++l +f++    + +++    v    fa pE+l+ +  y+         + d+W+l
   KHJ33660.1 194 EDECRNIF-VQVAQAICHLHTKaSIVHRDIKDENIVLDREGKIKLIDFGSAAYIK-NGPFdVFVGtIDFAAPEILSGKP-YRG-------KEQDVWAL 281
                  67799998.9999******98637************************9865443.344312333367******99843.555.......467***** PP

  Kinase-like 237 GlviyriwclklPltlateeakeewkfklckkipekvkaLlkkfLqlsqedR 288
                  G+  y i   + P+    e ++ +  +     + e    L++ +L +++e R
   KHJ33660.1 282 GILLYTIVYKEKPFSTTDEIMEGK--LGIPYVMNEDNLSLIRAMLDRNVESR 331
                  **************9877766666..77777788888899999999999987 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.6   1.7e-08   3.7e-05     205     254 ..     194     243 ..      12     259 .. 0.87

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 1.7e-08
  Haspin_kinase 205 wkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlkls 254
                     +++ +if q+++ +    tk    HRd++ +ni +d+++++ lid+  +
     KHJ33660.1 194 EDECRNIFVQVAQAICHLHTKASIVHRDIKDENIVLDREGKIKLIDFGSA 243
                    479*******************************************9765 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0016       3.5      32     106 ..     130     212 ..      87     215 .. 0.70
   2 !   15.3   0.0   6.3e-06     0.014     165     198 ..     214     245 ..     212     247 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0016
                 S-HHHHHHHHHHHHHHHHTT-B--B-CTTB..S-EEETTEEEEEEE----EE-SS......HHHHHHHHHHHHHHHHHHCCHH CS
         APH  32 raaeeirrevallrlLakagvpvPevlagd..tddeeigllfalieyvpgrsllr......klsaaqlpellealgeflaalh 106
                 r   +++ e ++l++L++ g++ P ++ +     de +++   +  ++pg +l +      ++ +++ ++++ ++++++++lh
  KHJ33660.1 130 RRLGTVPLEIHVLDFLRQGGLQHPNIIEMTdfFEDEINYYIETVPHGQPGMDLFDyielrtNMGEDECRNIFVQVAQAICHLH 212
                 46668899*************9899985332245566666555555555555555555555566******************9 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 6.3e-06
                 -EEEE-SS-SGGGEEEC..TTEEEEE---TT-EE CS
         APH 165 ptvllHgDlhpgNllvdpddgrvtGviDfedagl 198
                 +++++H+D++  N+++d ++g++  +iDf+ a +
  KHJ33660.1 214 KASIVHRDIKDENIVLD-REGKI-KLIDFGSAAY 245
                 5789*************.77887.79****9876 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.48   1.1e+03      81     120 ..      83     121 ..      71     129 .. 0.62
   2 ?   -1.0   0.0      0.52   1.2e+03     106     119 ..     107     120 ..      84     173 .. 0.56
   3 !   19.3   0.0   3.1e-07   0.00069     100     153 ..     190     244 ..     176     250 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.48
                 TEEEEE--EETTEEGGBHHHCG.-HHHHHHHHHHHHHHHHH CS
        RIO1  81 hvlvmefigedgvaapklkdve.eeeeaeelyeevleemrk 120
                 + +++e ig  + a+ ++k v+ +++++++++ + + + r+
  KHJ33660.1  83 DFVILEEIG--EGAYGQVKLVRyKKDNNRKMVIKYVTKRRI 121
                 567777777..444444444443366777777666665554 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.52
                 HHHHHHHHHHHHHH CS
        RIO1 106 eaeelyeevleemr 119
                 ++++++ + + + r
  KHJ33660.1 107 NNRKMVIKYVTKRR 120
                 33333333332222 PP

  == domain 3  score: 19.3 bits;  conditional E-value: 3.1e-07
                 HCG-HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT.EEEE--GTTEE CS
        RIO1 100 dveeeeeaeelyeevleemrklykeaglvHaDLSeyNvlvded.kvviIDvsQav 153
                     e+e ++++ +v ++++ l ++a +vH D+ + N+++d++ k+ +ID++ a 
  KHJ33660.1 190 TNMGEDECRNIFVQVAQAICHLHTKASIVHRDIKDENIVLDREgKIKLIDFGSAA 244
                 3334899**********************************999******98765 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0     3e-07   0.00067     315     389 ..     204     269 ..     190     290 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 3e-07
  Pkinase_fungal 315 aIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkge 389
                     + ++   L++ka i+HrDi  +Ni++      +e k  LiD+  a  +++          +GT+ F a e+l+g+
      KHJ33660.1 204 VAQAICHLHTKASIVHRDIKDENIVLD-----REGKIKLIDFGSAAYIKN--GPF--DVFVGTIDFAAPEILSGK 269
                     5566678*******************9.....8999***********995..333..4689*******9999964 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.6e-05     0.035     143     188 ..     197     241 ..     186     246 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.6e-05
  Seadorna_VP7 143 tvniivaglkdLmdfhsestnllhGDcnpenlmcDknGylklvDPv 188
                     ni v   +++ ++h  +  ++h D++ en++ D+ G +kl+D +
    KHJ33660.1 197 CRNIFVQVAQAICHLH-TKASIVHRDIKDENIVLDREGKIKLIDFG 241
                   5677777788999999.8899***********************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       514  (0.0286686); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 2649.65
//
Query:       KHJ33661.1  [L=645]
Description: putative ribosome biogenesis protein kri1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-29  100.7   0.4    3.8e-29  100.7   0.4    4.2  5  Kri1_C    KRI1-like family C-terminal
    1.1e-24   87.0  12.7    1.1e-24   87.0  12.7    4.7  5  Kri1      KRI1-like family


Domain annotation for each model (and alignments):
>> Kri1_C  KRI1-like family C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.7   3.5         2   1.8e+04      62      83 ..      65      87 ..      58      92 .. 0.51
   2 ?   -3.3   0.0       1.2   1.1e+04       5      20 ..     294     309 ..     291     326 .. 0.77
   3 ?   -5.3   5.2         2   1.8e+04      77      81 ..     343     347 ..     314     366 .. 0.56
   4 ?   -1.4   0.5      0.31   2.8e+03      66      83 ..     487     504 ..     478     508 .. 0.49
   5 !  100.7   0.4   4.2e-33   3.8e-29       2      89 .]     507     593 ..     505     593 .. 0.92

  Alignments for each domain:
  == domain 1  score: -4.7 bits;  conditional E-value: 2
      Kri1_C 62 pYrdkekk.kkdkkklkkkkrlr 83
                +Y++k+++ +k ++kl+k++++ 
  KHJ33661.1 65 EYNKKREElQKLEEKLSKSQKNS 87
                45555433144455555555554 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.2
      Kri1_C   5 elvdeyykldledvig 20 
                 e++++ y+l +ed +g
  KHJ33661.1 294 EIFESAYNLRFEDPTG 309
                 6889999999998665 PP

  == domain 3  score: -5.3 bits;  conditional E-value: 2
      Kri1_C  77 kkkkr 81 
                 ++kk+
  KHJ33661.1 343 REKKE 347
                 22221 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 0.31
      Kri1_C  66 kekkkkdkkklkkkkrlr 83 
                 k+ k k k++ k+k+rl+
  KHJ33661.1 487 KKDKIKAKNDEKNKARLE 504
                 233344444444444444 PP

  == domain 5  score: 100.7 bits;  conditional E-value: 4.2e-33
      Kri1_C   2 kleelvdeyykldledvi.gdlkvrFkYrevspesFgLtareILladDkeLnefvglkklapYrdkekkkkdkkklkkkkrlrewrkev 89 
                 ++eelv+++  ld++ v+ ++++ rF+Yre+sp sFgLt+++IL+a+D+ Ln+f+glkkla++rd+ kk+kdkk+l+kk+rlr+wrke+
  KHJ33661.1 507 RIEELVESH--LDHNLVTdSKKRSRFRYRETSPVSFGLTPQDILMAPDTSLNQFAGLKKLASFRDPLKKRKDKKTLSKKSRLRQWRKET 593
                 689999999..77775553589*****************************************************************86 PP

>> Kri1  KRI1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   2.9     0.071   6.4e+02      16      38 ..      68      94 ..      56     122 .. 0.50
   2 ?   -3.2   1.1       1.4   1.3e+04      32      32 ..     180     180 ..     136     223 .. 0.61
   3 !   87.0  12.7   1.2e-28   1.1e-24       1     102 [.     344     456 ..     344     457 .. 0.96
   4 ?   -2.1   1.9      0.63   5.6e+03       8      22 ..     494     508 ..     477     524 .. 0.45
   5 ?   -1.7   0.4      0.49   4.4e+03      15      41 ..     572     598 ..     566     618 .. 0.49

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.071
        Kri1 16 rlkklkreeieeklekikkaag.....e 38
                + k+   +++eekl+k +k        +
  KHJ33661.1 68 K-KREELQKLEEKLSKSQKNSNkkygdK 94
                2.33344555555555555444222220 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.4
        Kri1  32 i 32 
                 i
  KHJ33661.1 180 I 180
                 1 PP

  == domain 3  score: 87.0 bits;  conditional E-value: 1.2e-28
        Kri1   1 erkeeekeekkeelkrlkklkreeieeklekikkaageeeaalkeleeeeledlldgdfDpekwdrkmkklFgeeyyaeede..............eek 85 
                 e+ke+e+++ +ee++rlk+lk ee+ee+++ ikk+ag   ++ k l+++e+ + ld+++D+ekw  +m klFgeeyya+++               + k
  KHJ33661.1 344 EKKEQEQKQLEEERNRLKRLKAEEMEERVKIIKKVAG--IRG-KMLTQDEIFKCLDEAWDNEKWTGEMGKLFGEEYYAAHEIesdhdskedinirkKIK 439
                 79***********************************..777.9999*******************************88778999**********9** PP

        Kri1  86 kPkwdddidikdivpdd 102
                 kPkwdddidi+di p++
  KHJ33661.1 440 KPKWDDDIDISDILPSF 456
                 *************9876 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 0.63
        Kri1   8 eekkeelkrlkklkr 22 
                 ++ +++++rl + ++
  KHJ33661.1 494 KNDEKNKARLERKRI 508
                 111122222222222 PP

  == domain 5  score: -1.7 bits;  conditional E-value: 0.49
        Kri1  15 krlkklkreeieeklekikkaageeea 41 
                 k+ k  k    +++l++ +k++  +e+
  KHJ33661.1 572 KKRKDKKTLSKKSRLRQWRKETFGDEN 598
                 444444444445555554444333444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (645 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2834  (0.158068); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.84u 0.28s 00:00:01.12 Elapsed: 00:00:00.44
# Mc/sec: 4442.20
//
Query:       KHJ33662.1  [L=152]
Description: hypothetical protein EV44_g0383 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       464  (0.0258799); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.20s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 1255.35
//
Query:       KHJ33663.1  [L=173]
Description: hypothetical protein EV44_g3733 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       254  (0.014167); expected 358.6 (0.02)
Passed bias filter:                      225  (0.0125495); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 1245.95
//
Query:       KHJ33664.1  [L=576]
Description: hypothetical protein EV44_g2106 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (576 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 4256.06
//
Query:       KHJ33665.1  [L=501]
Description: putative peptidase c1-like family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   5.9e-152  506.5   0.0   6.8e-152  506.2   0.0    1.0  1  Peptidase_C1_2  Peptidase C1-like family
    3.1e-06   27.4   0.1      0.045   13.8   0.1    2.4  2  Peptidase_C1    Papain family cysteine protease
  ------ inclusion threshold ------
       0.18   11.2   0.0       0.25   10.8   0.0    1.2  1  Amidohydro_3    Amidohydrolase family


Domain annotation for each model (and alignments):
>> Peptidase_C1_2  Peptidase C1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  506.2   0.0  1.1e-155  6.8e-152       2     438 .]      52     498 ..      51     498 .. 0.96

  Alignments for each domain:
  == domain 1  score: 506.2 bits;  conditional E-value: 1.1e-155
                     S-HHHHHHHHHHHCTSHHHHHHHHHHTTS-HHHHHB-HHHHHH-----SEE-SS-..S--B--BSSTHHHHHHHHHHHHHHHHHCT-SS--B-HH CS
  Peptidase_C1_2   2 ltkeklekfskefkadpknkvianaakksglleallnkkvkkelervFstevetd..evtnqkqsGRCWlFaalnvlRlkllkklklkefelsqa 94 
                     l++++++ +++++ +dpkn+++ +a++k + + +l+++++  ++++vF+t ++ +  ++tnqk+sGRCWlFa++nv+R++l+k+++l++felsqa
      KHJ33665.1  52 LSVSEIKFWEHQLLQDPKNRLALSALSKADPKAVLTSRSAVIRDQHVFNTVIPLEgaPITNQKSSGRCWLFASTNVFRVALMKRHNLDKFELSQA 146
                     6789999*********************************************99999************************************** PP

                     HHHHHHHHHHHHHHHHHHHHCCTS-TTSHHHHHHHH-TT-S-B-HHHHHHHHHHH---BGGGS-S-CHHHBHHHHHHHHHHHHHHHHHHHHHHHH CS
  Peptidase_C1_2  95 ylffwDklEkanyFleniietadepldsRlvkfllatpqqDGGqwdmlvslvekyGvvPkkvypesfnseasrelnelLnkklrkdaleLRklve 189
                     ylff+DklEk+nyFl+++++t++epld+Rl+++ll++p +DGGqwdm+v+lvekyG+vP+ +yp+sfn+++s+++++l+++klr++al+LR+ ++
      KHJ33665.1 147 YLFFYDKLEKSNYFLQQVLDTVHEPLDQRLMQTLLNQPVSDGGQWDMVVNLVEKYGLVPHVLYPDSFNATSSSSIDDLITTKLRENALRLRSFAS 241
                     ********************************************************************************************999 PP

                     TTTTC.HHHHHHHHHHHHHHHHHHHHHC---S...SSEEEEEE-TTS-EEEEEEE-HHHHHHHCTT........S-CCCEEEEE--T-TTS-TTE CS
  Peptidase_C1_2 190 egkdk.eeieakkeelleeifrllaialgePp...ktFdfeyrdkdknyhkekdltpkeFyekyvk........ldledkvslinaPtadkpynk 272
                     +g+++ eei++ k+++++ei+ +l ++lg Pp    +F + y dk+   h+ ++ tp  F+++             ++  +sl+n+P  +++yn 
      KHJ33665.1 242 SGTKSiEEISSIKDRMVREIHLILILTLGPPPapsTEFVWSYLDKNGIAHELRK-TPIAFASELESqksiritnSAVQSMISLVNDP--RNEYNT 333
                     98764399*********************99988789**************999.*****98764333433433568899*******..99**** PP

                     EEEETT--SSTT---EEEEE--HHHHHHHHHHHHHTT--EEEEE-TTTTEETTTTEE-TTSB-HHHHHT--S-S-HHHHHHTTS----EEEEEEE CS
  Peptidase_C1_2 273 lytvellgnvvggrkvlylnvevevlkklviaqlkdgeavwFGsdvgkemdrktGlldldlykleelldvdlklskAerldygeslmtHamvltg 367
                     l+tv+ lgn+vggr+++y+nv++++lk++ i+ l++g  ++FGsdvgk ++++tG++d  l ++e  ++v+l+++kAerl +ges+mtHamvlt+
      KHJ33665.1 334 LLTVDRLGNIVGGRSITYINVSISTLKNACIKMLQAGLPIFFGSDVGKYSNSSTGIMDDSLIDYELGFNVKLSMTKAERLMTGESAMTHAMVLTA 428
                     *********************************************************************************************** PP

                     EEE-TTSSEEEEEEE-SBTTTSTBTTEEEEEHHHHHHHEEEEEEEGGGS-HHHHHHHHS--EEE-TTSCCC CS
  Peptidase_C1_2 368 vdvdddgkvtkwkvEnsWGedsGekGyfvmsdewfdeyvyevvvdkkylpeellealeeepivLeaWDplg 438
                     v++ +dgk  +w+v nsWG  +G +G+fvmsd+w+de+vy++vv+ +++++e++++l+++p vL+ WDp+g
      KHJ33665.1 429 VHI-EDGKSVRWRVQNSWGSGAGVDGWFVMSDKWMDEFVYQAVVEPRFISQEVKDVLKTKPKVLPLWDPMG 498
                     ***.99****************************************************************8 PP

>> Peptidase_C1  Papain family cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   5.5e-05      0.33      16      54 ..     109     147 ..     105     156 .. 0.91
   2 !   13.8   0.1   7.5e-06     0.045     162     202 ..     418     459 ..     360     470 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 5.5e-05
                   ---B-TSSBTHHHHHHHHHHHHHHHHHHSSS---B-HHH CS
  Peptidase_C1  16 pvkdqgsCGsCWafsavgaledrlaiktkkklvslSeqe 54 
                   p+ +q+s G CW f++++++  +l+ +++ ++++lS+  
    KHJ33665.1 109 PITNQKSSGRCWLFASTNVFRVALMKRHNLDKFELSQAY 147
                   899***********************9999999999865 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 7.5e-06
                   SS-EEEEEEEEEEEET.TEEEEEEE-SBTTTSTBTTEEEEES CS
  Peptidase_C1 162 telnhavlivGygven.gkkyWivkNsWgtdwgekGYiriar 202
                   ++++ha+++     e+ ++  W v+NsWg+  g +G++ ++ 
    KHJ33665.1 418 SAMTHAMVLTAVHIEDgKSVRWRVQNSWGSGAGVDGWFVMSD 459
                   467787777777777624556*****************9986 PP

>> Amidohydro_3  Amidohydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   4.1e-05      0.25     357     438 ..     349     435 ..     303     436 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 4.1e-05
  Amidohydro_3 357 s...........tpvkellnagvkvalgsDapvgpfdpwprigaavmrktrrggevlrpdeelsleealalyTrgpAkalgledrkGtLevGa 438
                   +           +++  +l+ag+++ +gsD     + +++   + +m +   + + l+ + +ls+++a +l+T ++A +  +  ++ ++e G+
    KHJ33665.1 349 ItyinvsistlkNACIKMLQAGLPIFFGSD-----VGKYSNSSTGIMDDSLID-YELGFNVKLSMTKAERLMTGESAMTHAMVLTAVHIEDGK 435
                   34445555566688999*************.....****************99.8**********************9888777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (501 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       533  (0.0297284); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3492.34
//
Query:       KHJ33666.1  [L=342]
Description: putative ap1-like transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-05   25.3   8.3    3.4e-05   23.8   8.3    1.8  1  bZIP_1    bZIP transcription factor
  ------ inclusion threshold ------
      0.028   15.1   0.1      0.096   13.4   0.1    2.0  1  dsrm      Double-stranded RNA binding motif


Domain annotation for each model (and alignments):
>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   8.3   3.8e-09   3.4e-05       8      63 ..      99     154 ..      97     159 .. 0.92

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 3.8e-09
                 XXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   8 krkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekLkskv 63 
                 krk++NR a+r++R R+ ++   Le +v  Le   +s  +e++ l+ +++k ++++
  KHJ33666.1  99 KRKAQNRAAQRAFRDRRDKYLRGLEVKVLNLEIASESANNENSILRAQINKILEEL 154
                 9*******************************999999999999999999888765 PP

>> dsrm  Double-stranded RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   1.1e-05     0.096      41      65 ..      88     112 ..      55     113 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.1e-05
                 TEEEEEEEESSHHHHHHHHHHHHHH CS
        dsrm  41 gklygsGvgsnKKeAeqsAAedale 65 
                 g+++++ + ++K++A+++AA++a++
  KHJ33666.1  88 GRKPITSEPTSKRKAQNRAAQRAFR 112
                 788899999**************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1114  (0.062134); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2519.29
//
Query:       KHJ33667.1  [L=198]
Description: hypothetical protein EV44_g1961 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.23   11.7   2.0       0.46   10.8   1.2    2.0  2  DUF948      Bacterial protein of unknown function (DUF948)
       0.46   10.5   4.6       0.69   10.0   3.9    1.6  1  DUF1664     Protein of unknown function (DUF1664)
          2    8.2   7.2       0.63    9.9   1.4    2.5  2  3HCDH_N     3-hydroxyacyl-CoA dehydrogenase, NAD binding doma


Domain annotation for each model (and alignments):
>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.2   7.7e-05      0.46      39      87 ..      49      97 ..       8      99 .. 0.81
   2 ?   -1.5   0.0      0.52   3.1e+03      23      39 ..     100     116 ..      93     137 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 7.7e-05
      DUF948 39 ekqvdpilkevedllakvnelledvneklekvdplteavadlgesvsel 87
                 +  +++l++++++  +  +l  dv+++  + d+++ea++++  +++e+
  KHJ33667.1 49 SSMSKETLQKTAQMSLEKINLNHDVRKRKRDCDKVFEAIENVNSQLAEF 97
                444556666677765555558*********************9998876 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.52
      DUF948  23 klkktldeaaatieele 39 
                 +++++++ a+++i e++
  KHJ33667.1 100 NISRLIQDATRSILEIK 116
                 45555556666555555 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   3.9   0.00011      0.69      40     105 ..      45     110 ..      40     129 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00011
     DUF1664  40 sdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedves 105
                 s+ v+s+sk+  q  ++++  k +L++++ +  +  d++ e++++++++++e ++++s++ +d + 
  KHJ33667.1  45 SSNVSSMSKETLQKTAQMSLEKINLNHDVRKRKRDCDKVFEAIENVNSQLAEFQNNISRLIQDATR 110
                 678999999999999999**************************************9987666544 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   1.4   0.00011      0.63      39      89 ..      41      89 ..      30     113 .. 0.72
   2 ?    0.3   0.4     0.094   5.6e+02      26      66 ..     129     173 ..     118     187 .. 0.57

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00011
                HHHHHHHHHCCTTTTSS-HHHHCCCHHCEEEES-HHHHH.C-SEEEE-S-SS CS
     3HCDH_N 39 lekieksleklvekgklkeeeveaalarisfttdleeav.dadlviEavvEn 89
                ++ i+++++++ +k+ l+ ++++  l++i+ + d+++ + d+d v+Ea+  n
  KHJ33667.1 41 QALISSNVSSM-SKETLQ-KTAQMSLEKINLNHDVRKRKrDCDKVFEAIE-N 89
                33444455554.444444.688889*************99*******984.3 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.094
                 EEE-S-HHHHHHHHHHHHH....HHHCCTTTTSS-HHHHCCCHHC CS
     3HCDH_N  26 vlvdiseealekalekiek....sleklvekgklkeeeveaalar 66 
                 + +d +++a+e a+  +e+    + e+  ++ +l++e++e++ +r
  KHJ33667.1 129 QALDLQKQAVEIARLDLEErcldRQERHRREDRLQQEKFEERRKR 173
                 566777777777777777732222333333333444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2749  (0.153327); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 1376.70
//
Query:       KHJ33668.1  [L=360]
Description: putative s-adenosylmethionine-dependent methyltransferase-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.19s 00:00:00.64 Elapsed: 00:00:00.34
# Mc/sec: 3131.08
//
Query:       KHJ33669.1  [L=469]
Description: putative atp-dependent dna helicase recq qde3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-19   70.2   0.0      3e-19   69.4   0.0    1.3  1  DEAD          DEAD/DEAH box helicase
    2.5e-15   56.8   0.0    1.5e-12   47.9   0.0    2.6  2  Helicase_C    Helicase conserved C-terminal domain
    1.7e-10   41.5   1.8    5.9e-10   39.7   1.8    1.9  1  RecQ_Zn_bind  RecQ zinc-binding
      0.006   16.6   0.0      0.014   15.4   0.0    1.6  1  ResIII        Type III restriction enzyme, res subunit
      0.009   15.5   0.2      0.018   14.5   0.2    1.5  1  SQS_PSY       Squalene/phytoene synthase


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.4   0.0   8.4e-23     3e-19       2     173 ..      28     194 ..      27     196 .. 0.82

  Alignments for each domain:
  == domain 1  score: 69.4 bits;  conditional E-value: 8.4e-23
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTT... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx... RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldng... 97 
                 + Q+++i+ +l g+d++v+a+TG GK+l+f++p++         ++  +++v+P+ +L+ +++n l++++ +++ +++ +++ +++++ l++l+ g   
  KHJ33669.1  28 PLQRKVIEFALAGHDIFVQAATGFGKSLCFQFPAV--------IDHGITIVVSPLLSLMTDQVNALRNCGIEAG-TINGMTSYEERQQLLQDLSTGhpl 117
                 78*********************************........356699**********************977.566667777888888899777899 PP

                 CSEEEEEHHHHHHHHHCTSSH....CTTEEEEEEETHHHHHHT..TTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHH CS
                 xxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  98 vdivvgtpgrlddllstgkln....lsqvrflVlDEadrlldq..gfsdfinrilnqlpqitcdgklqrqvivlSATlpkdv 173
                 +++++ tp+++++   +++l+     +++  + +DEa++++++  +f++  ++ l+ ++    + +    vi+l+AT+ ++v
  KHJ33669.1 118 TRLLYVTPEQCANDAFRKHLKtvykQKELARIAIDEAHCISEWghDFRPSFKE-LKWFRANFPEVP----VICLTATAIEQV 194
                 **********999664555544533667777************7777777777.555544444444....*******98766 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.0     0.004        14      19      65 ..      68     114 ..      57     125 .. 0.77
   2 !   47.9   0.0   4.1e-16   1.5e-12      19     110 ..     271     364 ..     252     365 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.004
                 EEEEESSHH.HHHHHHHHHHHT.TSTEEEESTTSTHHHHHHHHHHHHTT CS
  Helicase_C  19 ilifvntid.rlekvklllekk.gikvavlhgelpqnereeileqfnkg 65 
                 ++++++  + + ++v+ l  ++ gi++ +++g ++ +er++ l++   g
  KHJ33669.1  68 TIVVSPLLSlMTDQVNAL--RNcGIEAGTINGMTSYEERQQLLQDLSTG 114
                 566666666444446677..5569*******************998765 PP

  == domain 2  score: 47.9 bits;  conditional E-value: 4.1e-16
                 EEEEESSHHHHHHHHHH...HHHTTSTEEEESTTSTHHHHHHHHHHHHTTS..SSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTTSSST CS
  Helicase_C  19 ilifvntidrlekvkll...lekkgikvavlhgelpqnereeileqfnkge..sdvLiatdvaerGidipkvnlVinfdlprnvtsyiqriGRtgRa 110
                  +i++ +++++e    l   l+ +gi + ++h+ l ++e++e+l+ + ++   +dv++at++ ++Gid ++v++Vi+ ++p++ + + q +GR+gR 
  KHJ33669.1 271 GIIYTIFRQDCEI---LasrLRANGIGAKPYHAGLRNEEKNETLRCWVENCvgYDVIVATTAFGMGIDKEDVRFVIHWQIPKSFEGFYQEAGRAGRD 364
                 4778888888855...42225677***********************86554489*****************************************6 PP

>> RecQ_Zn_bind  RecQ zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7   1.8   1.6e-13   5.9e-10       3      63 ..     378     438 ..     376     439 .. 0.78

  Alignments for each domain:
  == domain 1  score: 39.7 bits;  conditional E-value: 1.6e-13
  RecQ_Zn_bind   3 DvsrlrrlieqseesekekeaelekleamlaycentteCrrkllleyFgeeaaeeeCgn.CD 63 
                   D+ r+ + ++++ ++e    a++++l+a+++yce+t++Cr++++ +yFge+ + + C   CD
    KHJ33669.1 378 DRDRMFNRMNKDINDELYMIARYKSLQALVNYCEDTSTCRHQMITRYFGET-EVPLCDYaCD 438
                   555555556666666777778899**************************6.5556954498 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0     4e-06     0.014      25     168 ..      41     189 ..      23     192 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4e-06
                 SEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--............-SEEEEEHHHHHHTH CS
      ResIII  25 krglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkka.....kekdstnkkilvttiqsldads 118
                 + +++++aTG GK+l+ +++ + + +      ++++ p +sl+    ++++++  ea + i++ +s +++++     + ++  ++ ++vt +q ++ + 
  KHJ33669.1  41 HDIFVQAATGFGKSLC-FQFPAVIDHG----ITIVVSPLLSLMTDQVNALRNCGIEAGT-INGMTSYEERQQllqdlSTGHPLTRLLYVTPEQCANDAF 133
                 46889********987.5555556554....79***********************976.66666666666667888999999999*******999999 PP

                 ........HHHTTT-SEEEEETGGGTTS......TTTHHH...HHT---SEEEEEESS CS
      ResIII 119 eeeeeeseellrdrfdviiiDEaHrlgak.....kswrei...lekfkeavllglTAT 168
                   ++  ++ +++++   i iDEaH +++       s++e+     +f+e  ++ lTAT
  KHJ33669.1 134 --RKHLKTVYKQKELARIAIDEAHCISEWghdfrPSFKELkwfRANFPEVPVICLTAT 189
                 ..567778888888889********999765554366665554567888999999999 PP

>> SQS_PSY  Squalene/phytoene synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.2   5.1e-06     0.018      89     138 ..     377     431 ..     367     450 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 5.1e-06
                 HHHHHHHHHTS--SS-.......--SHHHHHHHHHHHHHHHHHHHHHHH-S.S-H CS
     SQS_PSY  89 ellleliegmeadlef.....tryetlddLeeYcyrvagvVgelclrllgarrsd 138
                 e  +++ + m +d++       ry +l++L++Yc+ +  + +++++r +g ++++
  KHJ33669.1 377 EDRDRMFNRMNKDINDelymiARYKSLQALVNYCEDTSTCRHQMITRYFGETEVP 431
                 55679999999999988888899***************************96554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       795  (0.0443416); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 3489.15
//
Query:       KHJ33670.1  [L=302]
Description: putative hd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-46  158.5   0.0      2e-46  157.9   0.0    1.3  1  HD_3      HD domain
    4.4e-10   39.6   0.0    7.8e-10   38.8   0.0    1.4  1  HD_2      HD containing hydrolase-like enzyme


Domain annotation for each model (and alignments):
>> HD_3  HD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.9   0.0   2.3e-50     2e-46       2     140 ..      70     213 ..      69     233 .. 0.91

  Alignments for each domain:
  == domain 1  score: 157.9 bits;  conditional E-value: 2.3e-50
        HD_3   2 ekLKfqkRqgwlqtgrvreesvaeHmwrvalmalllseelkekvdiarvikmfLiHDlvEiltgDiispdelakeekeeeekeaaerilkllpee.... 96 
                 e+LK+++R+gw+++g++++es+++Hm+r+alm+++++++l   +di+r++km+LiHD++E+l+gDi+++++++k ek+ +e  +++ ++k++ ++    
  KHJ33670.1  70 ERLKTTPREGWRRFGVKNAESISDHMYRMALMTMFAPQSLVGIIDIQRCTKMALIHDMAEALVGDITPVEGVSKSEKNWRESTTMDFLTKNILGNvdgg 168
                 89***********************************************************************************99999977776666 PP

        HD_3  97 .laeellalweEFeeretkeakfakdlDklepllqalekegdsla 140
                  +a++++a+w+E+e++et e+kf++d+Dk+e++lq++e+e+   +
  KHJ33670.1 169 nVANDIRAIWQEYEDGETLESKFVHDIDKVELILQMVEYERAFDC 213
                 899*************************************87755 PP

>> HD_2  HD containing hydrolase-like enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.0   8.7e-14   7.8e-10       2     146 ..      65     209 ..      64     214 .. 0.78

  Alignments for each domain:
  == domain 1  score: 38.8 bits;  conditional E-value: 8.7e-14
        HD_2   2 FfallsrlkyieR..walmrntreenvaeHslevaliahalalienkkfggkldaerlallalyHDasEiitGDlptpvKyanpeireaykevEee..a 96 
                 Ff+ll+rlk+  R  w      + e++++H +++al++++    + + + g +d++r+ ++al+HD++E+++GD+ tpv   +++ ++  ++      +
  KHJ33670.1  65 FFHLLERLKTTPRegWRRFGVKNAESISDHMYRMALMTMF----APQSLVGIIDIQRCTKMALIHDMAEALVGDI-TPVEGVSKSEKNWRESTTMDflT 158
                 9***********955555566999***********98765....45666789**********************9.88887776655554444433414 PP

        HD_2  97 eekllelLpeelreeyeella.deeaeeeekklvkaaDklsalikcleelk 146
                 ++ l +    ++ ++++ +++  e+ e+ e k+v+  Dk++ +++++e ++
  KHJ33670.1 159 KNILGNVDGGNVANDIRAIWQeYEDGETLESKFVHDIDKVELILQMVEYER 209
                 444444445789999999996577777889************999998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       465  (0.0259356); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2308.37
//
Query:       KHJ33671.1  [L=474]
Description: hypothetical protein EV44_g1145 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.022   14.6   0.1      0.043   13.7   0.1    1.5  1  DUF1601   Protein of unknown function (DUF1601)


Domain annotation for each model (and alignments):
>> DUF1601  Protein of unknown function (DUF1601)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   2.4e-06     0.043       2      23 ..     431     452 ..     430     459 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.4e-06
     DUF1601   2 gvkwqyleeqrLserLlvaIrr 23 
                 gvk+q+   qrL+erL + Ir+
  KHJ33671.1 431 GVKRQDESIQRLDERLKEMIRQ 452
                 9********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       845  (0.0471303); expected 358.6 (0.02)
Passed bias filter:                      553  (0.0308439); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3368.61
//
Query:       KHJ33672.1  [L=365]
Description: hypothetical protein EV44_g3489 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       629  (0.0350828); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2784.78
//
Query:       KHJ33673.1  [L=376]
Description: putative homoserine dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-48  165.2   0.0    1.7e-48  164.8   0.0    1.2  1  Homoserine_dh  Homoserine dehydrogenase
    3.9e-19   69.4   0.0    6.8e-19   68.7   0.0    1.4  1  NAD_binding_3  Homoserine dehydrogenase, NAD binding domain


Domain annotation for each model (and alignments):
>> Homoserine_dh  Homoserine dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.8   0.0   1.9e-52   1.7e-48       1     173 []     166     369 ..     166     369 .. 0.91

  Alignments for each domain:
  == domain 1  score: 164.8 bits;  conditional E-value: 1.9e-52
                    --HHHH.HHTCTTSEEEEEEEE--HHHHHHHHHHH...CHTT-HHHHHHHHHHTTSS-SSTHHHHTTHHHHHHHHHHHHHHCTTT-.-GGGSEE-- CS
  Homoserine_dh   1 Piiktl.keilsgdritrieGilngtlnyilteme...eegasfsevlkeaqelGyaeaDptdDveGlDaarKlailarlafglev.eledveveg 91 
                    Pi++tl ++i +gd+i +ieG+++gtl+++++ ++    +g ++s+ + +a++lGy+e+Dp+dD++GlD+arKl+ilarla gl+v ++++++v++
     KHJ33673.1 166 PILSTLnDLIETGDEIIKIEGVFSGTLSFLFNSFApvnGNGGKWSTEVTNAKNLGYTEPDPRDDLNGLDVARKLTILARLA-GLTVeSPTSFPVQS 260
                    9*********************************977644577**************************************.999977999***** PP

                    ST...............TS-HHH......HHHHHCTTEEEEEEEEE....CEEEEEEEEEETTSGGGHSSST-EEEEEEESSSEE..EEEEES-SS CS
  Homoserine_dh  92 is...............kltaed......ikeakeegkvlklvasa....vearVkpelvpkshplasvkgsenavlvetdrlge..lviqGpgaG 160
                    +                kl+++d        +a++egkv+++v+s+     e++V+++ +++s+p+a +kgs+n+++++t+r+ +  l+iqG+gaG
     KHJ33673.1 261 LIpkelenvvdgneflqKLPKFDaqmeqiKVAAENEGKVVRFVGSIsfatKEIKVGLHNFDRSNPIAMLKGSDNIISFYTKRYRDspLIIQGAGAG 356
                    888888888888888887777777766644456699*********8765449********************************99********** PP

                    HHHHHHHHHHHHH CS
  Homoserine_dh 161 aepTAsavlsDll 173
                    +++TA++v +Dl+
     KHJ33673.1 357 GDVTAMGVTGDLI 369
                    ***********97 PP

>> NAD_binding_3  Homoserine dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.7   0.0   7.5e-23   6.8e-19       1     117 []      20     158 ..      20     158 .. 0.86

  Alignments for each domain:
  == domain 1  score: 68.7 bits;  conditional E-value: 7.5e-23
                    --SHHHHHHHHHHHH---S.......SEEEEEEEEESSEEE-TT...........HHHHHT--CB---HHHHHHHH....S-EEEEE-S--HHHHT CS
  NAD_binding_3   1 GlGaiGsavleqlkrqqse.......ielelvavadrdsllskd...........rkallasealtldlddliahl....dpdvvVEcasseavae 74 
                    G G++Gs++l+ql+   ++        +l lv+v +++ ++ +d             +l +s+++ l+l+++++ l       ++V+++ss+ va+
     KHJ33673.1  20 GTGGVGSRFLAQLEYISKQrcehpssPKLSLVLVSRSS-KILYDeeynklpfeniYVRLENSQQKILKLPEIVDYLsaapSKTILVDNTSSQEVAD 114
                    89***********9888878899955555555555555.55555669****9999667778888888888888877888679************** PP

                    THHHHHHTTEEEE-S--CGGG.-HHHHHHHTSSSTTS--.EE-G CS
  NAD_binding_3  75 lvlkaLkagkdvvtankgala.dealyeeLreaaeangakiyve 117
                    +++++L++g+++vt+nk+a++ + +l++++++aa+ +ga++y+e
     KHJ33673.1 115 FYPRFLEKGISIVTPNKKAFSsSIELWKDIFSAASNSGAQVYHE 158
                    *********************9********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2911.71
//
Query:       KHJ33674.1  [L=459]
Description: putative hydroxymethylglutaryl- synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.6e-104  349.5   1.4     2e-104  349.1   1.4    1.1  1  HMG_CoA_synt_C  Hydroxymethylglutaryl-coenzyme A synthase C t
      4e-95  316.6   0.2    5.8e-95  316.1   0.2    1.3  1  HMG_CoA_synt_N  Hydroxymethylglutaryl-coenzyme A synthase N t


Domain annotation for each model (and alignments):
>> HMG_CoA_synt_C  Hydroxymethylglutaryl-coenzyme A synthase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  349.1   1.4  2.3e-108    2e-104       1     280 []     176     458 ..     176     458 .. 0.94

  Alignments for each domain:
  == domain 1  score: 349.1 bits;  conditional E-value: 2.3e-108
                     EEE-TT--EEEE----SEE---TT-S--EE-HHHHHHHHHHHHHHHHHHHHHH.......HHHHHHH.........------GGG-SEEEE--SS CS
  HMG_CoA_synt_C   1 ivfdrklrashmehayDFykPdlaseYPvvDGklslscYlkaldrcYksyskk.......vkkitkd.........adkeftlddfdyvifhsPf 79 
                     +v++++lr+s+m+hayDFykPdl+seYP+vDG++s++cY +a+d cYk y+++       +     +         a++++ ld+f+y+ifh+P+
      KHJ33674.1 176 LVVEPGLRGSYMQHAYDFYKPDLTSEYPIVDGHFSVKCYTEAVDACYKAYNERethlksiS-----NghtngdnshASHTTPLDRFNYMIFHAPT 265
                     5899***********************************************9954433322.....1233344543466778************* PP

                     HHHHHHHHHHHHHHHHHH.S-HHHHHHH-GGGGGGTT--GGGGGT-HHHHHHHHHHHHHHHHHHTGGGGHHHHHH---GGGHHHHHHHHHHHHS- CS
  HMG_CoA_synt_C  80 cklvqkslarllynDflanassdkeeevkekleekddlkldesltdkdlekallkiakelfkkkvkpsllvptevGnmYtaslyaalasllskvs 174
                     cklv ks+arllynD+l n+  d + ev +k++ +   ++  sltdk lek ++ ++k++f ++v ps+ +pt +GnmYtas+y+ ++slls+v 
      KHJ33674.1 266 CKLVAKSYARLLYNDYLLNPCADIFVEVPSKFKDM---DYSTSLTDKMLEKIFMGLTKKRFCERVLPSIEAPTMCGNMYTASVYSGIVSLLSNVD 357
                     *****************************999888...********************************************************* PP

                     HHHHTT-EEEEEEEETTTEEEEEEEEE-S--STTSHHHHHTTTTHHHHHHTSEEE-HHHHHHHHHHHHHHTT--SB---S-GGGS-TT-EEEEEE CS
  HMG_CoA_synt_C 175 adelagkriglfsYGsGlaaslfslrvkqdvsedsildiakvldlkkkLdsRkevtPeefeealelrekahlkknfkpqgsidsLaegtyyLeev 269
                     +  l+gkrig+fsYGsGla+slfs++v + +++     ++kvl+lk +L++R++v+P+ + e+ elr+k+hl+knf+p+gsi+++a+++yyL+++
      KHJ33674.1 358 SAALQGKRIGIFSYGSGLASSLFSCKVVGSTEK-----LQKVLNLKARLAARQTVSPKVYDEMCELRKKVHLQKNFIPSGSIETIAPNVYYLSNI 447
                     *****************************9999.....99******************************************************* PP

                     -TTS-EEEEE- CS
  HMG_CoA_synt_C 270 DdkfRRsYavk 280
                     Dd+fRR+Y+vk
      KHJ33674.1 448 DDMFRRTYEVK 458
                     ********987 PP

>> HMG_CoA_synt_N  Hydroxymethylglutaryl-coenzyme A synthase N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  316.1   0.2   6.5e-99   5.8e-95       1     174 []       4     175 ..       4     175 .. 0.99

  Alignments for each domain:
  == domain 1  score: 316.1 bits;  conditional E-value: 6.5e-99
  HMG_CoA_synt_N   1 rpkdvgilaleiylpaqyvdqaelekfdgveagkytiglgqtrmgfvsdredinslsltvvqkllertkldydaigrlevgtetiidksksvksv 95 
                     rp ++gi+a+eiy+p+q+vdqaelekfdgv++gkytiglgqt+m+f++dredi+s++ltv ++ll+++++d+++igrlevgtet++dksksvksv
      KHJ33674.1   4 RPANIGIKAIEIYFPSQCVDQAELEKFDGVSEGKYTIGLGQTKMSFCDDREDIYSFALTVCSNLLRKYEIDVNSIGRLEVGTETLLDKSKSVKSV 98 
                     699******************************************************************************************** PP

  HMG_CoA_synt_N  96 lmqlfeesgntdiegidtlnacyggtaalfnavnwiessawdgryalvvagdiaiydsgnarptggagavalligpdap 174
                     lmqlf +  nt+ieg+dt+nacyggt+a+fna+nwiessawdgr+a+v+agdia+y++gnarptggagavalligpdap
      KHJ33674.1  99 LMQLFAN--NTNIEGVDTINACYGGTNAVFNALNWIESSAWDGRDAIVIAGDIALYAKGNARPTGGAGAVALLIGPDAP 175
                     *****99..*********************************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 3406.15
//
Query:       KHJ33675.1  [L=1223]
Description: putative intermediate filament protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-49  168.5   2.1    2.6e-49  167.7   0.5    2.4  2  PXA       PXA domain
    1.6e-29  102.7   1.9    6.2e-29  100.8   0.0    3.0  4  Nexin_C   Sorting nexin C terminal
    2.3e-21   75.9   0.6    1.6e-20   73.2   0.6    2.4  2  PX        PX domain
      8e-11   42.3   4.0    9.5e-11   42.0   1.0    2.8  3  RGS       Regulator of G protein signaling domain
  ------ inclusion threshold ------
       0.13   12.0   0.9       0.36   10.6   0.9    1.9  1  Rbsn      Rabenosyn Rab binding domain


Domain annotation for each model (and alignments):
>> PXA  PXA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.7   0.5   7.3e-53   2.6e-49       1     181 [.     102     285 ..     102     286 .. 0.97
   2 ?   -3.1   0.0       1.8   6.5e+03     115     130 ..     938     963 ..     893     981 .. 0.58

  Alignments for each domain:
  == domain 1  score: 167.7 bits;  conditional E-value: 7.3e-53
         PXA   1 speldeelhellalilrdfVlsWYskissdeeFptevrsilrsviralanrlkkvDlaqllltrlldlltshlrdyrqaeekvkskkae......eesd 93 
                 s+ ++++l+e+l+li rdfV+sWYs is+++ F++ev++++r v+ +l+ rl  +Dla++l+ r++++lt+h+r y +ae++v++k  +      ee+d
  KHJ33675.1 102 SQAISDALNEILDLIARDFVNSWYSGISKSPVFTNEVDKAIRVVLVNLRGRLFVLDLAAILIARIVPILTAHFRGYYNAEREVRGKYLNrtvtesEELD 200
                 5789************************************************99********************************************* PP

         PXA  94 ldlaakffalephpalsavlrdieeskeaelaylrslverlLslllppedlesetvrtlvreilanvvlkplleklsdPdfinqliik 181
                 l++aa++++++ hpa+     ++++++  +++ylr++v++lL+ llp++ l+s+t+++lv e++++++l p++++lsdPd++nq++++
  KHJ33675.1 201 LAIAARYNNGKIHPAVC---LSYSDTRLLQQEYLRNVVKDLLPRLLPESYLASRTASALVNELVVCTILIPTIQLLSDPDTWNQIMES 285
                 ****************5...556788999********************************************************986 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.8
         PXA 115 d..........ieeskeaelaylrsl 130
                             ++ ++a ++ylr++
  KHJ33675.1 938 RrmvmklqtefLQKRRQALEKYLREI 963
                 13333333333334444556666654 PP

>> Nexin_C  Sorting nexin C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       3.9   1.4e+04      45      70 ..     691     723 ..     689     740 .. 0.60
   2 ?   -2.6   0.0       2.3   8.1e+03      48      69 ..     757     781 ..     724     789 .. 0.61
   3 ?   -1.5   0.1       1.1   3.8e+03      44      90 ..     928     972 ..     909     973 .. 0.65
   4 !  100.8   0.0   1.7e-32   6.2e-29       1     112 []    1093    1200 ..    1093    1200 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 3.9
     Nexin_C  45 klrdalWPdg.......eskaesaperseeekl 70 
                  lr++l+ ++       +s+++s+p+ s + k+
  KHJ33675.1 691 DLRNSLFDEEgcpspfrQSQNTSSPSSSVHRKR 723
                 688999965566666655555555444444443 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.3
     Nexin_C  48 dalWPdg.....eskaesaperseeek 69 
                 d l+Pd+     +  + + pe +e++k
  KHJ33675.1 757 DDLFPDEekfmsD--EHEDPEEDESDK 781
                 7899999555332..222223333333 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.1
     Nexin_C  44 kklrdalWPdgeskaesaperseeeklrtraearklLle..llpdalvs 90 
                 +++r++ +P   ++     + ++e  +++r++ +k L e  llp+ ++s
  KHJ33675.1 928 TSIRNSNFP---RRR-MVMKLQTEFLQKRRQALEKYLREilLLPEVCRS 972
                 667777777...222.223456666678888888888554678887776 PP

  == domain 4  score: 100.8 bits;  conditional E-value: 1.7e-32
     Nexin_C    1 WlrrqaltvlkqvlqqllgdtierwlkekiekltseeavaslikklrdalWPdgeskaesaperseeeklrtraearklLlellpdalvsvvGrkna 97  
                  Wlr++a+   ++vl+qllg+tier+++e+i+ l se++++++i  lrd++WPdg + ++++++r++++k ++++ea  +L +l+pd+++svvGr na
  KHJ33675.1 1093 WLRGRAV---VVVLHQLLGGTIERKVRENIKGLFSEDSIVRYIALLRDSIWPDG-ELKTEKKPRTSAQKVKSKTEASFMLATLIPDLAASVVGRVNA 1185
                  *****99...********************************************.77777799********************************** PP

     Nexin_C   98 eealkrifellQnpr 112 
                  ++a++rif++l+npr
  KHJ33675.1 1186 QAASRRIFATLNNPR 1200
                  *************95 PP

>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.54   1.9e+03      24      69 ..     203     248 ..     190     261 .. 0.82
   2 !   73.2   0.6   4.4e-24   1.6e-20      14     112 ..     882     981 ..     869     982 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.54
                 EEEEETTSSSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSS CS
          PX  24 yevelktgakewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlf 69 
                 +  ++++g+++  v  +Ysd   L+++ lr+ ++  +P l +++ +
  KHJ33675.1 203 IAARYNNGKIHPAVCLSYSDTRLLQQEYLRNVVKDLLPRLLPESYL 248
                 6667888888999999999999999999999998889988887765 PP

  == domain 2  score: 73.2 bits;  conditional E-value: 4.4e-24
                 ETTSSEEEEEEEEEETTS....SSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHHTSCHHHHSHHHHH CS
          PX  14 sgskkhsyylyevelktg....akewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrnsevlte 108
                 + +++  +y++e+ +k g    a +wt+ RrYs+F eLh++L++k+ +++   +P+++++ +    ++ef++krr++Le+yL+++l  pe ++s +l++
  KHJ33675.1 882 DDGREFAVYVIEINRKAGeqipAATWTIARRYSEFLELHQRLREKYTSIRNSNFPRRRMVMK---LQTEFLQKRRQALEKYLREILLLPEVCRSIELRS 977
                 35888999*********9****************************************9976...********************************** PP

                 HHHS CS
          PX 109 FLev 112
                 FL++
  KHJ33675.1 978 FLSE 981
                 **87 PP

>> RGS  Regulator of G protein signaling domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.2   7.8e+03      85     107 ..     100     122 ..      80     135 .. 0.55
   2 !   42.0   1.0   2.7e-14   9.5e-11       2     117 ..     415     550 ..     414     551 .. 0.91
   3 ?   -2.5   0.0       1.7     6e+03      64      97 ..     915     948 ..     901     967 .. 0.56

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.2
                 TTTTTTHHHHHHHHHHHHHHHHH CS
         RGS  85 psrklfeeaqeevfellekdsyp 107
                 + +++  +a +e+++l+++d ++
  KHJ33675.1 100 KESQAISDALNEILDLIARDFVN 122
                 44445555555566665555444 PP

  == domain 2  score: 42.0 bits;  conditional E-value: 2.7e-14
                 HHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTS...............SHHHHHHHHHHHHHHHHTSTTSTTSSTS-HHHHHHHHHHHCSS.. CS
         RGS   2 leslledqpgrslFreFlesefseenlsFwlaveefkka...............keqeelkkkakeIyneylapsspkelnidkklreelekrleke.. 83 
                 l ++l+d +g+ +F e++++++    ++Fw+ v++f++                +  e   k+  +Iy+ y+   s+ el+i++  r  ++++l+    
  KHJ33675.1 415 LVDILHDTSGLTYFMEYMDRQKLLTLVQFWIVVDGFRTPlesdfadddintaslSYTELDRKDLAQIYDCYF---SKLELKISDTSRRIVREFLKAGkd 510
                 679***********************************************9996333333444889******...*******************99999 PP

                 ......STTTTTTHHHHHHHHHHHHHHHHHHHHTSHHHHH CS
         RGS  84 ......qpsrklfeeaqeevfellekdsypkFlkselylr 117
                          rk   +aq++++++++++++ +F ks+l+ +
  KHJ33675.1 511 asprqyYLARKEILKAQTATLDVMQENYFLNFKKSDLFYK 550
                 99999988999999************************87 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.7
                 TSSTS-HHHHHHHHHHHCSSSTTTTTTHHHHHHH CS
         RGS  64 kelnidkklreelekrlekeqpsrklfeeaqeev 97 
                 + l++ ++lre+ ++  + + p r++  ++q+e 
  KHJ33675.1 915 EFLELHQRLREKYTSIRNSNFPRRRMVMKLQTEF 948
                 4455666666666655555544444444444432 PP

>> Rbsn  Rabenosyn Rab binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.9    0.0001      0.36       2      41 ..     809     848 ..     809     849 .. 0.96

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.0001
        Rbsn   2 LeEQkflveemIkqAkkarrfDEvatLeeNLkELqeEidr 41 
                 Le Q + + +m + A+  ++  E+ +L+++ + Lq+Ei r
  KHJ33675.1 809 LEAQDDVIDSMTRKAELTNNTAELRILKKSKTSLQREIRR 848
                 7889**********************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1022  (0.0570026); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.82u 0.27s 00:00:01.08 Elapsed: 00:00:00.47
# Mc/sec: 7865.93
//
Query:       KHJ33676.1  [L=329]
Description: hypothetical protein EV44_g5326 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-27   96.0  17.7    1.2e-27   96.0  17.7    2.6  4  DUF4078          Domain of unknown function (DUF4078)
  ------ inclusion threshold ------
        2.2    7.0   5.4       0.24   10.2   0.6    1.7  2  Glyco_hydro_65m  Glycosyl hydrolase family 65 central catalyt


Domain annotation for each model (and alignments):
>> DUF4078  Domain of unknown function (DUF4078)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   1.2         1   9.4e+03      71      75 ..      96     100 ..      77     114 .. 0.45
   2 ?   -2.4   0.1      0.71   6.3e+03       3      15 ..     129     141 ..     128     165 .. 0.75
   3 ?   -1.9   1.0      0.49   4.4e+03      61      74 ..     166     179 ..     146     186 .. 0.68
   4 !   96.0  17.7   1.4e-31   1.2e-27       1      86 []     220     305 ..     220     305 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1
     DUF4078  71 kRkae 75 
                  R + 
  KHJ33676.1  96 HRSKR 100
                 22222 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.71
     DUF4078   3 eelareeeesatp 15 
                 +++a++e+ + + 
  KHJ33676.1 129 QKWAEQEDAQSDS 141
                 6888888876654 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.49
     DUF4078  61 qRkkreelkekRka 74 
                  R++ e++k++Rk 
  KHJ33676.1 166 TRAEIEKIKRQRKV 179
                 45666666666665 PP

  == domain 4  score: 96.0 bits;  conditional E-value: 1.4e-31
     DUF4078   1 qmeelareeeesatppeevhYdaekEvRtkGvgfyaFskDeeeRkkqmeeLeelreeTeeqRkkreelkekRkaeleerlkkirer 86 
                 +meela+++++s+tppe+ hY+a+kEvRtkGvgfy+FskDe  R+++m++Le++r eTe++Rk+ree++++R  e+eer+k i+e+
  KHJ33676.1 220 KMEELAAKRDRSLTPPEMRHYEADKEVRTKGVGFYQFSKDEALREEEMKSLEQERIETEKRRKEREEKRKQRLLEIEERRKVIQEK 305
                 69*********************************************************************************986 PP

>> Glyco_hydro_65m  Glycosyl hydrolase family 65 central catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.4      0.11   9.5e+02     207     261 ..      83     138 ..      75     170 .. 0.63
   2 ?   10.2   0.6   2.7e-05      0.24     226     289 ..     249     315 ..     206     323 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.11
  Glyco_hydro_65m 207 eeaeklevkeeelekwekv...leklylpideelgviaqkdgflelaeldleeykala 261
                      e+++k+ev+e+ l++ ++     +k+y +++    v+++ ++ ++ ++  ++e ++++
       KHJ33676.1  83 EKRQKIEVDEAILHRSKRKmeaKAKIYAQMKR-GEVLENVETLVDFDQK-WAEQEDAQ 138
                      45577778887777655432225677777776.4777777777776653.44423333 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 2.7e-05
  Glyco_hydro_65m 226 leklylpideelgviaqkdgflelaeldleeykalagdet.dlllkaegdk..vlesqviKQaDvll 289
                          ++++++++ + +++ + le+++++ e+ ++  ++++ ++ll++e  +  ++e+ +iKQaD  l
       KHJ33676.1 249 KGVGFYQFSKDEALREEEMKSLEQERIETEKRRKEREEKRkQRLLEIEERRkvIQEKRIIKQADSFL 315
                      444589999999999999999********9976665555568899887654236899*******876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2184  (0.121814); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2319.02
//
Query:       KHJ33677.1  [L=289]
Description: putative trna (guanine-n -)-methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.1e-53  178.3   0.1    1.3e-52  177.8   0.1    1.2  1  Methyltransf_4   Putative methyltransferase
    0.00026   21.7   0.0    0.00089   19.9   0.0    2.0  2  Methyltransf_25  Methyltransferase domain
     0.0023   17.5   0.0     0.0037   16.8   0.0    1.3  1  MTS              Methyltransferase small domain
      0.006   16.4   0.0      0.012   15.4   0.0    1.5  1  Methyltransf_31  Methyltransferase domain
  ------ inclusion threshold ------
       0.01   15.8   0.0       0.02   14.9   0.0    1.5  1  Methyltransf_32  Methyltransferase domain
      0.033   14.9   0.0      0.068   13.9   0.0    1.5  1  Methyltransf_12  Methyltransferase domain
      0.062   13.9   0.1       0.31   11.7   0.0    2.2  3  Methyltransf_11  Methyltransferase domain
       0.16   11.9   0.0       0.32   10.9   0.0    1.4  1  Methyltransf_18  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.8   0.1   5.8e-56   1.3e-52       3     172 ..      98     275 ..      96     276 .. 0.98

  Alignments for each domain:
  == domain 1  score: 177.8 bits;  conditional E-value: 5.8e-56
                     EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHC........TTSSEEEEES-CCCHHHHCS-TTSEEEEEEES-----SGGG CS
  Methyltransf_4   3 pvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkieal........elkNlrilrgdalkvllelledgslekifilFPDPwfKkrh 89 
                       v++iGcG G++lvalA+  P++++lG+Eir++v ++v ++i+ l         +kN++++r + +k+l++++e+++l+kif++FPDP+fK r+
      KHJ33677.1  98 IEVADIGCGFGGLLVALAPVMPETLLLGMEIRSQVAEYVQERIKSLrvknktsgLYKNIACIRANTMKFLPNFFEKQQLSKIFLCFPDPHFKVRK 192
                     5789******************************************9999999889*************************************** PP

                     GGGSTTSHHHHHHHHHHEEEEEEEEEEESHHHHHHHHHHHHHCSTTEEESSCCCSCCTCHCHHCCCSSTTCCCCCCTTSS-EE CS
  Methyltransf_4  90 hKrRllqpellkelarvLkkgGvlelaTDveeyaeemlkvleeeplferlskeeeleeeplsvlriatkyeqkvqskgkeiye 172
                     hK R+++ +l +e+a++ ++gG+++++TDve+++++m+++++ +p f ++ + e++++e+++++r  t+++ kv+++++++y 
      KHJ33677.1 193 HKARIVSTTLNSEYAYITRPGGIIYTITDVEDLHKWMVNHFDMHPAFDKIPEVEQEADECVKIMRDKTEEGMKVERNKGPKYV 275
                     ******************************************************************************99885 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.9   6.4e+03      40      66 ..      18      44 ..      10      56 .. 0.69
   2 !   19.9   0.0     4e-07   0.00089       1      74 [.     100     186 ..     100     214 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.9
                     HHHHTTTTEEEEESBCCGBSSSTTTEE CS
  Methyltransf_25 40 raeeeglnvefvqgdaedlpfedgsfD 66
                     +a +e ++ +++++ a++ pf d++  
       KHJ33677.1 18 KATAEAPKKKYYRQRAHANPFSDHRLK 44
                     333456688888888888888887655 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 4e-07
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT.........TEEEEESBCCG.BS..SSTTTEEEEEEEST.G CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl.........nvefvqgdaed.lp..fedgsfDlvvssga.l 74 
                      v d+GcG G l+ ala  +++  ++g++i ++  e+++er+++ ++         n+ +++++  + lp  fe+++   +++++   
       KHJ33677.1 100 VADIGCGFGGLLVALAPVMPETLLLGMEIRSQVAEYVQERIKSLRVknktsglykNIACIRANTMKfLPnfFEKQQLSKIFLCFPdP 186
                      78****************999*******************99843333344557777777777766355666777777777665544 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   1.6e-06    0.0037      20      81 ..      83     146 ..      76     180 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.6e-06
                 HHHHHHHCHCC..TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC CS
         MTS  20 sklLletlpke..lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle 81 
                 s++L+e  pk+  ++ +v+D+GcG+G l +ala   pe+ +  +++  +  e  +e +++ +++
  KHJ33677.1  83 SDILAESRPKNltKNIEVADIGCGFGGLLVALAPVMPETLLLGMEIRSQVAEYVQERIKSLRVK 146
                 778888888885445569********************99999999999999988888877665 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   5.5e-06     0.012       2      55 ..      95     147 ..      94     174 .. 0.93

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 5.5e-06
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldn 55 
                      +k+++v D+GCG G l+ +la  + p+  + G +i  ++ e+ +e+ ++l ++n
       KHJ33677.1  95 TKNIEVADIGCGFGGLLVALA-PVMPETLLLGMEIRSQVAEYVQERIKSLRVKN 147
                      799******************.8889999********99999999999999887 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   8.7e-06      0.02      21      93 ..      92     160 ..      81     202 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 8.7e-06
  Methyltransf_32  21 akesgaltvvDvGaGkgYLsfvlalkekeyklkvvgidakeelvekaekraeklgkkfnkrlsfaelsieeat 93 
                      ++ +++++v+D+G+G g L  +la   +  ++ ++g++++++++e  ++r + l+  +++++s   ++i+ + 
       KHJ33677.1  92 KNLTKNIEVADIGCGFGGLLVALAP--VMPETLLLGMEIRSQVAEYVQERIKSLR--VKNKTSGLYKNIACIR 160
                      4557889*****************9..547899*********************9..8888888777777665 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0     3e-05     0.068       2      47 ..     102     147 ..     101     157 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3e-05
  Methyltransf_12   2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennn 47 
                      +iGcG G ll al++  p++ ++g++i +++ e  +e++++ + +n
       KHJ33677.1 102 DIGCGFGGLLVALAPVMPETLLLGMEIRSQVAEYVQERIKSLRVKN 147
                      9************************************999988665 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       4.5     1e+04      37      60 ..      20      41 ..      10      54 .. 0.62
   2 ?   11.7   0.0   0.00014      0.31       2      58 ..     102     167 ..     101     218 .. 0.75
   3 ?   -0.8   0.0       1.1   2.4e+03      48      64 ..     218     235 ..     190     259 .. 0.59

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 4.5
                     HCCHHT-EEEETTEECCCTSS-TT CS
  Methyltransf_11 37 kaseeglkvefvvadaeklpfedn 60
                      a+ ++   ++ +++a+  pf d+
       KHJ33677.1 20 TAEAPK--KKYYRQRAHANPFSDH 41
                     333333..3566667776677765 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00014
                      EET-TTSHHHHHHHHTT..SEEEEEES-HHHHHHHHHHCCHHT-.........EEEETTEECCCTSS- CS
  Methyltransf_11   2 dvGcGtGrlaealakrg..arvvgvDlskemlklakekaseegl.........kvefvvadaeklpfe 58 
                      d+GcG G l+ ala     + ++g+++  ++ ++++e+++  ++         ++ +++a+  k  f 
       KHJ33677.1 102 DIGCGFGGLLVALAPVMpeTLLLGMEIRSQVAEYVQERIKSLRVknktsglykNIACIRANTMK--FL 167
                      9*************77778899**********99999999988777777776665555555555..33 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.1
                      TTEECCCT.SS-TT-EEE CS
  Methyltransf_11  48 vvadaekl.pfednsfDl 64 
                         d+e+l +   n fD+
       KHJ33677.1 218 TITDVEDLhKWMVNHFDM 235
                      344555554455555554 PP

>> Methyltransf_18  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00014      0.32      13      67 ..      95     149 ..      90     164 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00014
  Methyltransf_18  13 ekgsrvaDiGtDHgylpiylvkegkakkviasDinegplekakeniekagledki 67 
                      +k+  vaDiG+  g l ++l+     +  + ++i+++  e  +e i++ ++++k 
       KHJ33677.1  95 TKNIEVADIGCGFGGLLVALAPVMPETLLLGMEIRSQVAEYVQERIKSLRVKNKT 149
                      56678*******************************************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2209.25
//
Query:       KHJ33678.1  [L=468]
Description: putative lipase or esterase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      4e-39  134.7   0.0    6.4e-39  134.0   0.0    1.3  1  Abhydrolase_3  alpha/beta hydrolase fold
    0.00037   19.5   0.0     0.0015   17.5   0.0    1.8  1  Say1_Mug180    Steryl acetyl hydrolase


Domain annotation for each model (and alignments):
>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.0   0.0   7.2e-43   6.4e-39       1     209 [.     160     391 ..     160     393 .. 0.89

  Alignments for each domain:
  == domain 1  score: 134.0 bits;  conditional E-value: 7.2e-43
                    EEEE--STTTS--TTTTHHHHHHHHHHHTSEEEEEE---TTTS-TTHHHHHHHHHHHHHHHTHH.HHT..ETTCEEEEEEETHHHHHHHHHHHHHH CS
  Abhydrolase_3   1 lvyfHGGGfvlgsldthdalcrelakelgavvvsvdYrlAPehpfPaavedalaalrwlaeqaw.elg..adpsrivlaGdSaGGnlaaavalrar 93 
                    ++y+HGG+  l+++ th+++ ++lak +g +++sv+YrlAP++pfPaa+ d+l a+  l+     +l+  + ps iv+aGdSaGGnl++a+++ + 
     KHJ33678.1 160 ILYIHGGALFLCDPITHRNVSQKLAKLTGGRAFSVRYRLAPQNPFPAALLDVLFAYMSLLYPPPgSLHtaVSPSDIVIAGDSAGGNLSLALLQLIL 255
                    69************************************************************9666665599********************8877 PP

                    HTT---..............EEEEEEESE-SST.........SSTTSHHHHHCHHTTTSSSSCHHHHHHHHHHHSSGGGGGSTTTSGGGCS-SST- CS
  Abhydrolase_3  94 degepk..............vagqvliyPvtdl.........ertesesikkaeeladgplltraaldlfwrlylpeadrddplaspllaedlsgl 166
                    + ++ +              +ag++  +P++d          ++      k+++e++ +++++++  +    +y+++  +++pl+spl+a++++g 
     KHJ33678.1 256 EIQRKSlkiawngeerdvpiPAGVATSSPWLDItsslpsiikNQAYDYLPKREKEYKPCSVWPTDPPR--KHMYVNDPLATHPLVSPLAAKNWNGS 349
                    7654446799*******************888877777666422222222334566999999999999..599**999**********9999**** PP

                    --EEEEEETT-TTHHHHHHHHHHHHHTT--EEEEEETTEETTG CS
  Abhydrolase_3 167 pptlvvvaefDplrdegeayaerlraagvevelieyegmvHgf 209
                    +p++++++++ +l de++  a +++++  +v l eye m+H+f
     KHJ33678.1 350 CPVYIATGWE-ILVDENKIGATHIASQDIKVILDEYEAMPHCF 391
                    *******998.*******************************9 PP

>> Say1_Mug180  Steryl acetyl hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   1.6e-07    0.0015     124     238 ..     159     289 ..     119     308 .. 0.58

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.6e-07
  Say1_Mug180 124 vllylHGGgfalklipvtlvfLsnlrklfpdm...ailvsDYtvtaakdqskkYplqvleslavydyl........vkskgfknvvvlGdSaGGnlvL 210
                   +ly+HGG + l  +p+t     n+ +++ ++         ++v      ++ +p  +l++l  y  l          + +  ++v+ GdSaGGnl L
   KHJ33678.1 159 TILYIHGGALFL-CDPITH---RNVSQKLAKLtggR----AFSVRYRLAPQNPFPAALLDVLFAYMSLlypppgslHTAVSPSDIVIAGDSAGGNLSL 248
                  466666666544.355443...44444444442222....23333333345666777777666665431111111144566789***********987 PP

  Say1_Mug180 211 slllk............lsklnkvv.lPkkaiaiSPWlnlt 238
                   ll               +  ++ v +P ++++ SPWl++t
   KHJ33678.1 249 ALLQLileiqrkslkiaWNGEERDVpIPAGVATSSPWLDIT 289
                  7664433344444333211123333489***********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.28s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3333.83
//
Query:       KHJ33679.1  [L=112]
Description: hypothetical protein EV44_g0297 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.06   13.7   0.0      0.071   13.5   0.0    1.1  1  FA_hydroxylase  Fatty acid hydroxylase superfamily


Domain annotation for each model (and alignments):
>> FA_hydroxylase  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0     4e-06     0.071      48     129 ..      12      93 ..       5      96 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 4e-06
  FA_hydroxylase  48 hplealllallllllllllgplsalllvlvlaallelliHsglhvslgwllerllatpraHrlHHskneegnfgvllslwDr 129
                     +++e++ + l++ll +l +gp+ +l+++ ++ +++ +  H  l+++ +  ++  l+ ++  + H  ++++ nf  l + +D 
      KHJ33679.1  12 SFIETWAVRLFILLGALTIGPWLLLIMYDAVLYIFRTTFHEFLQIKSTLSTQPHLKPSEISNSHFGEQQDINFNILEKTMDE 93 
                     6899999999999999*********************999996677777766668999999999999999999998888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 874.52
//
Query:       KHJ33680.1  [L=98]
Description: hypothetical protein EV44_g3701 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.035   13.2   0.2      0.039   13.1   0.2    1.0  1  Tuberin   Tuberin
      0.047   13.3   0.5       0.15   11.7   0.3    1.9  2  Apo-CIII  Apolipoprotein CIII (Apo-CIII)


Domain annotation for each model (and alignments):
>> Tuberin  Tuberin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   4.3e-06     0.039     186     258 ..      11      84 ..       6      93 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.3e-06
     Tuberin 186 Lcklvsdkkls.ekLkstpekfsrtdlqalvlpvLaalvsYhesLdkstqqelvkclesglkskcakqcvvalt 258
                 L ++ + k+ + +k k++ ++   +dl ++v + L+ +  Y ++++k +q  lv+c  + l+   a ++  a +
  KHJ33680.1  11 LPEMTEHKMAKnKKDKTVVKSEGGADLTDAVKSRLELMNPYLQNIEKDHQDCLVQCAVKELTLAHAAHAAHAAQ 84 
                 5566666666633444455557789*********************************9999999988877655 PP

>> Apo-CIII  Apolipoprotein CIII (Apo-CIII)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.16   1.4e+03      26      39 ..      11      24 ..       5      27 .. 0.80
   2 ?   11.7   0.3   1.7e-05      0.15       6      39 ..      43      78 ..      39      88 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.16
    Apo-CIII 26 LtsvqesqvaqqAr 39
                L ++ e ++a++ +
  KHJ33680.1 11 LPEMTEHKMAKNKK 24
                66889999999866 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 1.7e-05
    Apo-CIII  6 sLLgvmqgYvqqAsktaqdaLt..svqesqvaqqAr 39
                s L++m+ Y+q+  k  qd L    v+e  +a+ A+
  KHJ33680.1 43 SRLELMNPYLQNIEKDHQDCLVqcAVKELTLAHAAH 78
                6799*****************8567*******9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       879  (0.0490267); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 803.27
//
Query:       KHJ33681.1  [L=609]
Description: putative serine threonine-protein kinase ssp1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.1e-52  176.4   0.2    2.7e-36  125.3   0.0    2.2  2  Pkinase         Protein kinase domain
    3.3e-21   75.7   0.2    2.6e-18   66.2   0.1    3.8  2  Pkinase_Tyr     Protein tyrosine kinase
      7e-06   25.6   0.0    2.2e-05   23.9   0.0    1.7  1  Kinase-like     Kinase-like
    6.9e-05   21.8   0.0     0.0015   17.3   0.0    2.3  2  Pkinase_fungal  Fungal protein kinase
    0.00011   22.2   0.1     0.0016   18.4   0.0    2.3  2  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   0.2   1.5e-16   5.2e-13       1      85 [.      26     119 ..      26     143 .. 0.88
   2 !  125.3   0.0   7.5e-40   2.7e-36      93     264 .]     328     549 ..     309     549 .. 0.85

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 1.5e-16
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.......HHHHHHHHHHHHHSCTTB--EEEEEEE..SSEEEEEEE--TTEBH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.......kkvlrEikilkklkhpnivrlyevfee..kdelylvleyveggel 85 
                 ye ++++G+G  GkV  +++ etg+ vA+K+i++ ++k +         +k+ rEi+ilkk++h n+v l+ev+ +   +++y++le+ve ge+
  KHJ33681.1  26 YEIISEIGRGVHGKVKLGRNLETGDFVAIKIIQRFSKKRRLGrvtfspeNKTKREIAILKKVRHANVVGLLEVIDDpeLKKIYMILEHVELGEI 119
                 78899***************************9887777665688899999************************96668*********99875 PP

  == domain 2  score: 125.3 bits;  conditional E-value: 7.5e-40
                 SS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS....................BCTTTSCGGGS-HHHH.. CS
     Pkinase  93 gslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk....................ltsfvgtseYlAPEvl.. 169
                  +++ ++a++ ++ ++ gleylH +gi+HrD+Kp+N+L  ++ ++KitDFG++   +   +                    l + vgt+ + APE+   
  KHJ33681.1 328 PCFTIDQARSAFRDTVLGLEYLHYEGIVHRDIKPANLLWTKDHKVKITDFGVSYFGRPVRDdeteesiseadstdfdddieLAKTVGTPAFFAPELCct 426
                 468999**********************************************98877666567799******************************999 PP

                 ....TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHT.HHHHHHHCT...SHH...HHHTTS..........................- CS
     Pkinase 170 ....keneyskkvDvWslGvilyelltgkppfsgekgkekvekeldq.lekilkilg...etkeklpeasei..........................s 234
                     ++ ++++++D+WslG++ly+l++ + pf ++++ + +++++++ +   ++ l+   +++ +      +                          +
  KHJ33681.1 427 dldaEKPKITEQIDIWSLGITLYCLIFARIPFMAKDEWQLFRRIAKEeVYIPRQRLKavdNSSYS------LpgssskrlstsnspfreenelafefvD 519
                 999666777************************99999999888888322222223333222333......1444566899999999************ PP

                 HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 235 eeakdllkkllkkdpkkRltaeellqhpyl 264
                 +e+ dllk++l kdp +R+  +e+++hp+l
  KHJ33681.1 520 NELYDLLKRMLVKDPAQRIKLREVKRHPWL 549
                 *****************************7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.2   0.1   7.4e-22   2.6e-18       3     221 ..      28     473 ..      26     492 .. 0.87
   2 ?    1.8   0.0     0.034   1.2e+02     230     257 ..     518     545 ..     495     546 .. 0.87

  Alignments for each domain:
  == domain 1  score: 66.2 bits;  conditional E-value: 7.4e-22
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH........HHHHHHHHHHHHTS-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHH CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee........keelleeakimkklkhpnivkllgvct..keepllivteyvkgGdLlk 90 
                  + +++G+G  GkV  g+      ++   Va+K++++ +++++        +++  +e++i+kk++h n+v ll v+   + +++++++e v+ G++  
   KHJ33681.1  28 IISEIGRGVHGKVKLGRNL----ETGDFVAIKIIQRFSKKRRlgrvtfspENKTKREIAILKKVRHANVVGLLEVIDdpELKKIYMILEHVELGEIPW 121
                  6789*************99....788899999998766665433333333678889*********************877788***********9976 PP

                  HHHHT............................................................................................. CS
  Pkinase_Tyr  91 fLrkk............................................................................................. 95 
                      k                                                                                             
   KHJ33681.1 122 RK--Kgtaqiclyerrriereqigeqsyddekyfrmmerrrlrklaqraqisqsimesnpnywsleyghdededfstasrdntsgshifpsfeslfit 217
                  44..345899**************************************************************************************** PP

                  .................................................................................................. CS
  Pkinase_Tyr  96 .................................................................................................. 95 
                                                                                                                    
   KHJ33681.1 218 kpdsqissrtssrpasggisrthtplpveselsmidlenespetsqvilfqslnsshgsfpafntlrngcnidsnsgrgrspsmadsfishmssigdm 315
                  ************************************************************************************************** PP

                  ..........CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTH...EETTTSSEE..............EETTSST CS
  Pkinase_Tyr  96 ..........ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLa...rdiekddey..............vkkeeak 166
                              + +t+++  s   +   G+eyL+ + +vHrd+   N L +++++vki+DfG++   r + +d++                +  ++ 
   KHJ33681.1 316 phdtleedylYVPCFTIDQARSAFRDTVLGLEYLHYEGIVHRDIKPANLLWTKDHKVKITDFGVSyfgRPVRDDETEesiseadstdfdddIELAKTV 413
                  ********99999**************************************************98555334333332233322222222222223344 PP

                  SGGGGS-HHHHHHSE......EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTT CS
  Pkinase_Tyr 167 lpvkWmapEslkekk......ftsksDvWsfGvllwEiftlgespypglkneevleklkeg 221
                      + apE   +        +t++ D+Ws G++l+ ++  ++ p+   ++ ++++++ ++
   KHJ33681.1 414 GTPAFFAPELCCTDLdaekpkITEQIDIWSLGITLYCLIF-ARIPFMAKDEWQLFRRIAKE 473
                  566899***887666677788***************9987.89999999888888888554 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.034
                  SBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 230 cpeelyelmkkcweedpeeRptfselve 257
                  + +ely+l+k+ + +dp++R +++e+ +
   KHJ33681.1 518 VDNELYDLLKRMLVKDPAQRIKLREVKR 545
                  679*******************999865 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   6.3e-09   2.2e-05     159     252 ..     348     460 ..     342     473 .. 0.82

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 6.3e-09
  Kinase-like 159 nLqakglvhgkftvdnllldekgglmlggft......aLvragtkvvlseve................kgfaPpEllgsrggytrknktkmthkldaW 234
                  +L+ +g+vh ++++ nll+ ++ ++++++f+      + + + t+  +se                   +f  pEl+         +k k+t ++d W
   KHJ33681.1 348 YLHYEGIVHRDIKPANLLWTKDHKVKITDFGvsyfgrPVRDDETEESISEADstdfdddielaktvgtPAFFAPELCCTDLD---AEKPKITEQIDIW 442
                  89***************************97322222344555666667766999********9988878888899998555...6899********* PP

  Kinase-like 235 qlGlviyriwclklPltl 252
                   lG++ y +  + +P+  
   KHJ33681.1 443 SLGITLYCLIFARIPFMA 460
                  **********99999964 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1     0.023        83     183     212 ..      76     105 ..      62     241 .. 0.79
   2 !   17.3   0.0   4.3e-07    0.0015     310     363 ..     337     384 ..     331     426 .. 0.57

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.023
  Pkinase_fungal 183 erksEaelLkkaeergvegvarlvahedve 212
                     + k+E  +Lkk+++++v g+  ++ + +++
      KHJ33681.1  76 KTKREIAILKKVRHANVVGLLEVIDDPELK 105
                     4459****************9999988876 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 4.3e-07
  Pkinase_fungal 310 ealrDaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakels 363
                     +a+rD + g++ L+   gi+HrDi   N+l t     +++k  + D+ +     
      KHJ33681.1 337 SAFRDTVLGLEYLH-YEGIVHRDIKPANLLWT-----KDHKVKITDFGVSYFGR 384
                     79************.*****************.....33333333433333322 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0       0.1   3.7e+02      33      84 ..      73     122 ..      59     139 .. 0.75
   2 !   18.4   0.0   4.4e-07    0.0016     150     204 ..     334     388 ..     311     388 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.1
                 -HHHHHHHHHHHHHHHHTT-.B--B-CTTBS-EEETTEEEEEEE---.-EE-SS CS
         APH  33 aaeeirrevallrlLakagv.pvPevlagdtddeeigllfalieyvp.grsllr 84 
                 +++++ re a+l+ ++ a+v    ev++   d e +   + ++e v+ g++++r
  KHJ33681.1  73 PENKTKREIAILKKVRHANVvGLLEVID---DPELKK-IYMILEHVElGEIPWR 122
                 7899************999977778887...555554.5666666653677777 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 4.4e-07
                 HHHHHHHHHH--S...SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEEECCHH CS
         APH 150 eqvlaalaallpg...elptvllHgDlhpgNllvdpddgrvtGviDfedaglgpplyD 204
                 + ++ a++++++g      ++++H+D++p Nll++  d++v  + Df+ +  g p+ D
  KHJ33681.1 334 Q-ARSAFRDTVLGleyLHYEGIVHRDIKPANLLWT-KDHKV-KITDFGVSYFGRPVRD 388
                 4.677777777778888899***************.44444.5999999988888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (609 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 4435.47
//
Query:       KHJ33682.1  [L=202]
Description: putative methylene-fatty-acyl-phospholipid synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.4e-31  107.4   2.9    7.3e-31  106.7   2.9    1.4  1  PEMT      Phospholipid methyltransferase
  ------ inclusion threshold ------
       0.83   10.1   4.4          2    8.9   0.4    2.9  3  HRG       Haem-transporter, endosomal/lysosomal, haem-respons


Domain annotation for each model (and alignments):
>> PEMT  Phospholipid methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.7   2.9   8.1e-35   7.3e-31       4     105 ..      91     191 ..      88     192 .. 0.97

  Alignments for each domain:
  == domain 1  score: 106.7 bits;  conditional E-value: 8.1e-35
        PEMT   4 ilGlllialglllvlssiealgefgtfygdfFlelmdklvtsGiYrylnnPeyvgstlgflGlaLitgsaaglllallvllvylialkfvEephlakiY 102
                 +l ++l+a+g++lvlss++alg +gt++gd+F++l++++vt++++++++ P+y gstl+flG+++++g++ag++l+l +l+vylial+ +E+p++ +iY
  KHJ33682.1  91 ALSYILLAIGNTLVLSSMWALGFTGTYLGDYFGILKENMVTGFPFNITDAPMYYGSTLSFLGTSIYYGKPAGIILTLEILIVYLIALR-FEDPFTMEIY 188
                 6799************************************************************************************.********** PP

        PEMT 103 gkr 105
                 +kr
  KHJ33682.1 189 AKR 191
                 997 PP

>> HRG  Haem-transporter, endosomal/lysosomal, haem-responsive gene
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.4   0.00022         2       5      47 ..      52     111 ..      50     112 .. 0.80
   2 ?   -1.2   0.1      0.32   2.8e+03       5      18 ..     142     155 ..     141     157 .. 0.79
   3 ?    1.0   0.0     0.063   5.7e+02      11      26 ..     162     177 ..     160     185 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00022
         HRG   5 iaygifgsilglsaflvylvlaivnkqgvs................l.ptSfylsavWsl 47 
                 ++yg+ ++i +l +f  +l+  ++++q+ s                  ++ + ls+ W+l
  KHJ33682.1  52 ACYGLGVTIFSLGIFRDFLFERAIREQSTSlllstplfralsyillAiGNTLVLSSMWAL 111
                 69*************************554446677766666777745888888888876 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.32
         HRG   5 iaygifgsilglsa 18 
                 + yg + s+lg+s+
  KHJ33682.1 142 MYYGSTLSFLGTSI 155
                 56889999999875 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.063
         HRG  11 gsilglsaflvylvla 26 
                 g+il l + +vyl++ 
  KHJ33682.1 162 GIILTLEILIVYLIAL 177
                 899**********984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       520  (0.0290033); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1605.25
//
Query:       KHJ33683.1  [L=836]
Description: putative m protein repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-27   96.2  11.1    1.4e-27   96.2  11.1    6.5  7  TMF_TATA_bd   TATA element modulatory factor 1 TATA binding
    4.8e-12   45.7  17.0    4.8e-12   45.7  17.0    9.0  8  TMF_DNA_bd    TATA element modulatory factor 1 DNA binding
  ------ inclusion threshold ------
       0.24   10.8   3.7        4.1    6.8   0.1    2.9  3  Sp38          Zona-pellucida-binding protein (Sp38)
       0.36   11.5   5.1    1.2e+02    3.3   5.1    4.3  1  DUF3800       Protein of unknown function (DUF3800)


Domain annotation for each model (and alignments):
>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2       1.2   5.6e+03      68      68 ..     135     135 ..     107     195 .. 0.60
   2 ?    1.2   5.2     0.091   4.1e+02      12      84 ..     225     297 ..     218     299 .. 0.77
   3 ?    3.5  14.2     0.018        81      11      96 ..     311     396 ..     302     403 .. 0.82
   4 ?   -8.0  16.1         4   1.8e+04      20      94 ..     412     487 ..     402     489 .. 0.63
   5 ?    3.4   4.5      0.02        89      34      79 ..     527     576 ..     521     600 .. 0.57
   6 ?    2.0   1.9     0.054   2.4e+02      13      47 ..     562     596 ..     551     631 .. 0.66
   7 !   96.2  11.1     3e-31   1.4e-27       3     114 ..     722     833 ..     720     834 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.2
  TMF_TATA_bd  68 e 68 
                  +
   KHJ33683.1 135 Q 135
                  1 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.091
  TMF_TATA_bd  12 qlverlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlL 84 
                   l+++l+s +  lE++ ++   ++ +     ++  + ++k  +e  +l+ +++++ +lek+l++ +++   lL
   KHJ33683.1 225 ALIKKLQSDVAALETQRQEDSHSYDEKIDALQRKLQYMAKEASERANLTGNSASSGSLEKKLADKEHQIALLL 297
                  6899999999999998877777776666666666667777777888888899999999999999988876666 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.018
  TMF_TATA_bd  11 vqlverlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlLellGeksEeveE 96 
                    ++++l +++r+   E++++k+  e+ ++e + ++e + k+ +   +++++++ +++l++ +++ q + e+  ++++  + +v+E
   KHJ33683.1 311 LATIKKLRAQLREENKEITTMKSLHESAKKEASYTEERLKKMQSYEKQVNDQQQLINQLRNDIKSGQMENENNNKIIKDLKNRVNE 396
                  67899***************998777777766666655555556666788999999***********9999999999999999998 PP

  == domain 4  score: -8.0 bits;  conditional E-value: 4
  TMF_TATA_bd  20 eirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleel.ekeleelqeryetlLellGeksEev 94 
                  +++   + +a+l  + ++leae+++ + e  + +++   l ++++e + + e+e++   + +e+ Le+l ek+Ee 
   KHJ33683.1 412 SLQAERNRVAELLADKTNLEAEKKQEATEAESTIRNLRILINENEERARVkEQEMKMELQILESKLEVLREKAEEA 487
                  4444445555555666677777777777776666666655444444444314566666677888999999999986 PP

  == domain 5  score: 3.4 bits;  conditional E-value: 0.02
  TMF_TATA_bd  34 elerleaerdea.reeivklmkeneelkelk...keleelekeleelqer 79 
                  ++++le+ rdea ++eiv+  k  e+++++k   +ele+l+++++ lq++
   KHJ33683.1 527 KISNLERDRDEAfQKEIVTRRKAREAVQKAKyteEELEDLRAKISILQQE 576
                  56777777777646677777766666655541114444444444444443 PP

  == domain 6  score: 2.0 bits;  conditional E-value: 0.054
  TMF_TATA_bd  13 lverlsseirrlEgElaslkeelerleaerdeare 47 
                   +e l ++i  l+ E++ +k +   l+++ +ea+ 
   KHJ33683.1 562 ELEDLRAKISILQQEISGYKHNFDALQKKAKEAET 596
                  45777777777777777777777777777666653 PP

  == domain 7  score: 96.2 bits;  conditional E-value: 3e-31
  TMF_TATA_bd   3 stssagpsvqlverlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlLellGeksEeveELraD 100
                  st ++g s ql e++ss +++l  ++ +++e+++r++ +rdear+ei +l +e+e +k+++ ++ el+kele+++ ryet+L +lGeksEe++EL+ D
   KHJ33683.1 722 STTGTGISEQLAEKMSSMVHQLKCDKVAMQEDINRVKVQRDEARKEIDNLKHEVEVKKKADLRVIELQKELEDIKMRYETTLVILGEKSEEIDELKGD 819
                  7889999******************************************************************************************* PP

  TMF_TATA_bd 101 vaDlKemykeqveq 114
                  ++D+K my+++ve+
   KHJ33683.1 820 IQDIKIMYRDLVEK 833
                  ************97 PP

>> TMF_DNA_bd  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.7       0.1   4.6e+02      47      71 ..     113     137 ..     107     141 .. 0.63
   2 !    5.0   2.5    0.0055        25      32      70 ..     224     266 ..     218     269 .. 0.73
   3 !   45.7  17.0   1.1e-15   4.8e-12       1      73 [.     280     352 ..     280     353 .. 0.97
   4 ?   -2.8  14.3       1.4   6.5e+03       2      54 ..     354     418 ..     353     438 .. 0.73
   5 ?   -8.5  17.8         4   1.8e+04      13      73 ..     419     487 ..     409     489 .. 0.64
   6 ?    2.6   5.4      0.03   1.3e+02      28      74 .]     546     595 ..     540     595 .. 0.81
   7 ?    0.6   0.9      0.13   5.8e+02      38      71 ..     743     776 ..     733     779 .. 0.70
   8 ?   -1.4   0.1      0.54   2.4e+03       7      18 ..     806     817 ..     800     823 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.1
  TMF_DNA_bd  47 keikelkkkleklekeleeleerlk 71 
                 ++i++ ++k+++  +++e+ +   +
  KHJ33683.1 113 EDISKFSEKINENKESVESANIQVS 137
                 5566666666666666666655544 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0055
  TMF_DNA_bd  32 nntikkLrkknkelekeikelk....kkleklekeleeleerl 70 
                 ++ ikkL+++++ le++ +e +    +k++ l+++l+ + +++
  KHJ33683.1 224 EALIKKLQSDVAALETQRQEDShsydEKIDALQRKLQYMAKEA 266
                 678************7776654444488888887777666655 PP

  == domain 3  score: 45.7 bits;  conditional E-value: 1.1e-15
  TMF_DNA_bd   1 sslekklkeKDeqIaqLmeEGekLskkelklnntikkLrkknkelekeikelkkkleklekeleeleerlkea 73 
                 +slekkl+ K+ qIa L+eEG  Lskkel   +tikkLr++++e +kei+++k+  e+  ke +  eerlk++
  KHJ33683.1 280 GSLEKKLADKEHQIALLLEEGLTLSKKELSYLATIKKLRAQLREENKEITTMKSLHESAKKEASYTEERLKKM 352
                 589*******************************************************************986 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 1.4
  TMF_DNA_bd   2 slekklkeKDeqIaqLmeEGekLskkelklnntikkLrkknkelekeikelk............k 54 
                 s ek+++  ++ I+qL+   +  + ++  +n++ik L+  ++e  k  ++ +            +
  KHJ33683.1 354 SYEKQVNDQQQLINQLRNDIKSGQMENENNNKIIKDLKNRVNEFVKHDTKINtdllqkslqaerN 418
                 56899999999***********9**************9999999876666654444444444444 PP

  == domain 5  score: -8.5 bits;  conditional E-value: 4
  TMF_DNA_bd  13 qIaqLmeEGekL...skkel.klnntikkLrkknkele..keikelk..kkleklekeleeleerlkea 73 
                 ++a+L++  ++L   +k+e  + + ti +Lr  ++e+e    +ke++   +l+ le++le l+e+++ea
  KHJ33683.1 419 RVAELLADKTNLeaeKKQEAtEAESTIRNLRILINENEerARVKEQEmkMELQILESKLEVLREKAEEA 487
                 55666554444411145554145789************5533333323388888999999999999886 PP

  == domain 6  score: 2.6 bits;  conditional E-value: 0.03
  TMF_DNA_bd  28 elklnntikkLrkknkele...keikelkkkleklekeleeleerlkeae 74 
                  +k ++++ k + +++ele    +i+ l+++++ +  +++ l++++keae
  KHJ33683.1 546 RRKAREAVQKAKYTEEELEdlrAKISILQQEISGYKHNFDALQKKAKEAE 595
                 67888888899888888886666666677999999999999999999987 PP

  == domain 7  score: 0.6 bits;  conditional E-value: 0.13
  TMF_DNA_bd  38 Lrkknkelekeikelkkkleklekeleeleerlk 71 
                 L+ +   + ++i++ k + ++  ke+++l+ + +
  KHJ33683.1 743 LKCDKVAMQEDINRVKVQRDEARKEIDNLKHEVE 776
                 5555556677888888888888888888887655 PP

  == domain 8  score: -1.4 bits;  conditional E-value: 0.54
  TMF_DNA_bd   7 lkeKDeqIaqLm 18 
                 l eK e+I++L+
  KHJ33683.1 806 LGEKSEEIDELK 817
                 568999999986 PP

>> Sp38  Zona-pellucida-binding protein (Sp38)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.3    0.0094        42      74     104 ..     377     406 ..     339     415 .. 0.78
   2 ?   -1.8   0.0       0.4   1.8e+03      93     135 ..     536     583 ..     509     611 .. 0.63
   3 ?    6.8   0.1   0.00092       4.1      13      54 ..     727     768 ..     718     784 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.0094
        Sp38  74 sldtedttnkrllkakdrieeffrkqveilk 104
                  ++ e ++nk +++ k+r++ef +++++i +
  KHJ33683.1 377 QMENE-NNNKIIKDLKNRVNEFVKHDTKINT 406
                 33333.457788999**********999865 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.4
        Sp38  93 eeffrkqveilkkkfetlPeiyyvegslq.....vvridrcrPGfGkn 135
                 +e f+k++  ++k  e++ +  y e+ l+     +  +++   G+ +n
  KHJ33683.1 536 DEAFQKEIVTRRKAREAVQKAKYTEEELEdlrakISILQQEISGYKHN 583
                 566788888888888899998888887752111134445555566555 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.00092
        Sp38  13 sfvrklkkildklisdlscevselsykchsvkiqrrglqsel 54 
                  + ++l + +++++  l c+   ++    +vk+qr +  +e+
  KHJ33683.1 727 GISEQLAEKMSSMVHQLKCDKVAMQEDINRVKVQRDEARKEI 768
                 567899999**************************9999886 PP

>> DUF3800  Protein of unknown function (DUF3800)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   5.1     0.027   1.2e+02      44      78 ..     335     433 ..      55     836 .] 0.80

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.027
     DUF3800  44 y....................................................krlleriakflkkn...dlik......sdeesdesilivldk.... 77 
                 +                                                    k l +r+++f+k +             ++ e+++ + ++ dk    
  KHJ33683.1 335 HesakkeasyteerlkkmqsyekqvndqqqlinqlrndiksgqmenennnkiiKDLKNRVNEFVKHDtkiN--TdllqksLQAERNRVAELLADKtnle 431
                 14444444444444444444444445553333333333366666666665555555555555555533330..13333354444444444444443333 PP

     DUF3800  78 .k 78 
                  +
  KHJ33683.1 432 aE 433
                 21 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (836 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3372  (0.188075); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                       124  (0.00691617); expected 17.9 (0.001)
Passed Fwd filter:                        57  (0.00317921); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.64u 0.36s 00:00:02.00 Elapsed: 00:00:00.55
# Mc/sec: 4587.85
//
Query:       KHJ33684.1  [L=840]
Description: putative brct domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-34  117.4   0.5    2.9e-19   68.8   0.1    5.7  6  PTCB-BRCT      twin BRCT domain
    5.6e-32  109.6   0.4    3.1e-29  100.8   0.0    3.5  4  RTT107_BRCT_5  Regulator of Ty1 transposition protein 107 BRC
    1.2e-26   92.9   3.9    6.7e-07   29.6   0.0    6.4  6  BRCT           BRCA1 C Terminus (BRCT) domain
    6.3e-21   74.6   1.1    0.00025   21.4   0.0    6.3  6  BRCT_2         BRCT domain, a BRCA1 C-terminus domain
    1.2e-09   38.3   0.1       0.07   13.4   0.0    4.4  4  LIG3_BRCT      DNA ligase 3 BRCT domain


Domain annotation for each model (and alignments):
>> PTCB-BRCT  twin BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   1.2e-06    0.0042      13      63 .]      28      82 ..      17      82 .. 0.82
   2 !   14.3   0.0   8.4e-06      0.03       7      63 .]     115     173 ..     109     173 .. 0.82
   3 !    9.2   0.0   0.00033       1.2      11      63 .]     254     305 ..     249     305 .. 0.86
   4 !   68.8   0.1     8e-23   2.9e-19       2      63 .]     339     400 ..     338     400 .. 0.99
   5 ?    0.4   0.0      0.17   6.3e+02      33      62 ..     654     684 ..     639     685 .. 0.77
   6 ?   -2.4   0.0       1.4   4.9e+03       5      27 ..     738     760 ..     735     760 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.2e-06
                HHHHHHHHHHTT-EEES...SE.ETT-SEEEECSS-CHHHHHHHHCT-EEE-CHH CS
   PTCB-BRCT 13 rkslqklieamGaeysk...dl.tksvTHLicksgeGekyekAkkwgipvVsveW 63
                  +l+k +e  Gae+++   +   k+vTH i+++     y  A++  ipvV ++W
  KHJ33684.1 28 AIDLKKDLELQGAEVTTigaKIdVKNVTHIISETIDFPEYPIARQHMIPVVIPDW 82
                5678888899999888633356679****************************** PP

  == domain 2  score: 14.3 bits;  conditional E-value: 8.4e-06
                 CB-TTCHHHHHHHHHHTT-EEESSEETT-SEEEECSS-CHHHHHHHHCT..-EEE-CHH CS
   PTCB-BRCT   7 gysgddrkslqklieamGaeyskdltksvTHLicksgeGekyekAkkwg..ipvVsveW 63 
                  + + d++ +   + amG+  +  ltk +TH  + ++   k++ A + +  ++++ + W
  KHJ33684.1 115 DIPSGDKDAIIGAVLAMGGVETNSLTKLTTHICALTTDHPKCQQAIEKNlkCKIILPHW 173
                 5666778999999********************************87763366666666 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00033
                 TCHHHHHHHHHHTT-EEESSE.ETT-SEEEECSS-CHHHHHHHHCT-EEE-CHH CS
   PTCB-BRCT  11 ddrkslqklieamGaeyskdl.tksvTHLicksgeGekyekAkkwgipvVsveW 63 
                  ++k +++li+  G+ ++ ++ +     ++c    G+ y++A k gi+v ++ W
  KHJ33684.1 254 RSLKVIEDLIKGSGGLITSNVrN--ADIFVCHWRDGNDYRYASKAGINVGNLSW 305
                 557889999999*****999944..4569********************99998 PP

  == domain 4  score: 68.8 bits;  conditional E-value: 8e-23
                 EEEEECB-TTCHHHHHHHHHHTT-EEESSEETT-SEEEECSS-CHHHHHHHHCT-EEE-CHH CS
   PTCB-BRCT   2 vicvtgysgddrkslqklieamGaeyskdltksvTHLicksgeGekyekAkkwgipvVsveW 63 
                 +i++++y g++r++l++l+ a Gae++k +++++THLi ++ ++ek+++A++wgi+ ++++W
  KHJ33684.1 339 RITLSNYGGEARTYLENLVIAAGAEFTKSMKQDNTHLITARKNSEKCQAAQEWGIEMINHLW 400
                 79************************************************************ PP

  == domain 5  score: 0.4 bits;  conditional E-value: 0.17
                 TT-SEEEECS.S-CHHHHHHHHCT-EEE-CH CS
   PTCB-BRCT  33 ksvTHLicks.geGekyekAkkwgipvVsve 62 
                  s+THL ++s  + +k+ +A  +g  vVs +
  KHJ33684.1 654 SSCTHLAAPSiVRTKKFLCAIAFGPVVVSTD 684
                 58*****966268899999998887777765 PP

  == domain 6  score: -2.4 bits;  conditional E-value: 1.4
                 EECB-TTCHHHHHHHHHHTT-EE CS
   PTCB-BRCT   5 vtgysgddrkslqklieamGaey 27 
                  t + ++  ++ ++++ea+G+++
  KHJ33684.1 738 CTEVVPNTPETYKDIVEANGGTF 760
                 555566666788999*****986 PP

>> RTT107_BRCT_5  Regulator of Ty1 transposition protein 107 BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.73   2.6e+03      35      60 ..      31      61 ..      15      63 .. 0.74
   2 ?   -3.4   0.0       2.5   9.1e+03      77      91 ..      77      91 ..      69      98 .. 0.75
   3 !    4.7   0.0    0.0078        28      76     100 .]     167     191 ..     154     191 .. 0.88
   4 !  100.8   0.0   8.6e-33   3.1e-29       3     100 .]     603     703 ..     601     703 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.73
                   HHHHHHHTTEEE-S.....GCCT-SEEE-SS CS
  RTT107_BRCT_5 35 dkkkLrklGikivq.....eakkcntliApk 60
                    kk L+  G ++++     + k+++++i+  
     KHJ33684.1 31 LKKDLELQGAEVTTigakiDVKNVTHIISET 61
                   4667888888888888888999999999876 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.5
                   EE-CHHHHHHHHHTS CS
  RTT107_BRCT_5 77 ilspdfiedvLkkkk 91
                   ++ pd+i++ L ++k
     KHJ33684.1 77 VVIPDWISHSLMRNK 91
                   7899***99998665 PP

  == domain 3  score: 4.7 bits;  conditional E-value: 0.0078
                    EEE-CHHHHHHHHHTS---SGGGB- CS
  RTT107_BRCT_5  76 kilspdfiedvLkkkklldleeyll 100
                    ki+ p++ +d+Lk +k +d+ +yll
     KHJ33684.1 167 KIILPHWFDDCLKLGKRIDEAPYLL 191
                    89***********99999*999986 PP

  == domain 4  score: 100.8 bits;  conditional E-value: 8.6e-33
                    HHHHHHTSSSXXX--EEEEESSS.TT.....SSHHHHHHHHHTTEEE-SGCCT-SEEE-SS---SHHHHHHCCCTTEEE-CHHHHHHHHHTS---S CS
  RTT107_BRCT_5   3 kekkkkkkkskpevkiravlTgceeevn...kedsdkkkLrklGikivqeakkcntliApkilRTeKFLksLskapkilspdfiedvLkkkklldl 95 
                    ++++k+ k+ +p+ +i++v+Tg++++ +   ke+sd+kkLr+ Gi i+q+ ++c++l+Ap+i+RT+KFL++++++p ++s+df++++L++k+ +d+
     KHJ33684.1 603 SRSTKRLKNGHPPPEIKLVITGYKRWLQdhsKESSDTKKLRNAGILITQNVSSCTHLAAPSIVRTKKFLCAIAFGPVVVSTDFLDACLESKDTPDV 698
                    6788999999*****************99******************************************************************* PP

                    GGGB- CS
  RTT107_BRCT_5  96 eeyll 100
                     +yll
     KHJ33684.1 699 CDYLL 703
                    99986 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0     4e-07    0.0014       7      79 .]      11      87 ..       8      87 .. 0.89
   2 !   17.8   0.0   8.9e-07    0.0032       4      79 .]     104     178 ..     101     178 .. 0.92
   3 !   11.5   0.0   8.5e-05       0.3       4      79 .]     236     310 ..     233     310 .. 0.80
   4 !   29.6   0.0   1.9e-10   6.7e-07       6      78 ..     335     404 ..     333     405 .. 0.95
   5 !    8.2   0.0   0.00091       3.2      29      79 .]     642     690 ..     628     690 .. 0.83
   6 ?    2.1   0.0     0.073   2.6e+02       2      37 ..     727     776 ..     726     823 .. 0.68

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 4e-07
                TTEEEEE..EESTSSHHHHHHHHHHHHTTCEE....ESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHHH CS
        BRCT  7 hgckfvi..tgvldnftrdeleelikehGGkv....ttevskktthlvvgepesrslkylealklnipivheewlldci 79
                ++c+f+i  +++l+     +l++ ++++G+ v     +   k++th++  +   +  +y  a +++ip+v ++w+ +++
  KHJ33684.1 11 ENCVFAIvlCSTLQRSRAIDLKKDLELQGAEVttigAKIDVKNVTHIISETI--DFPEYPIARQHMIPVVIPDWISHSL 87
                79*****88888888888888***********88877777889999998888..99*******************9875 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 8.9e-07
                 TTTTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTSE..EEETHHHHHHH CS
        BRCT   4 llfhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgepesrslkylealklnip..ivheewlldci 79 
                 l+f+ +++ +     + ++d +   +  +GG  t++++k tth+ + ++  +  k+++a+++n +  i+ + w+ dc+
  KHJ33684.1 104 LIFSSVNISC-ADIPSGDKDAIIGAVLAMGGVETNSLTKLTTHICALTT--DHPKCQQAIEKNLKckIILPHWFDDCL 178
                 7999999999.9***********************************99..99*******999863379999999997 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 8.5e-05
                 TTTTTEEEEEEESTSSHHHHHH...HHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHHH CS
        BRCT   4 llfhgckfvitgvldnftrdel...eelikehGGkvttevskktthlvvgepesrslkylealklnipivheewlldci 79 
                 ++f+++k+ i +   +    +l   e+lik  GG +t+ v + + ++ ++ +   +  y  a k +i + + +wl+++i
  KHJ33684.1 236 TVFDKKKVMI-SDDLDLSQRSLkviEDLIKGSGGLITSNVRNADIFVCHWRD---GNDYRYASKAGINVGNLSWLYHLI 310
                 6899999999.33333333333566***********8888888888888888...789999**************9987 PP

  == domain 4  score: 29.6 bits;  conditional E-value: 1.9e-10
                 TTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHH CS
        BRCT   6 fhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgepesrslkylealklnipivheewlldc 78 
                 f+++ + + +++ ++ r++le+l+   G+ +t++ ++++thl++      s+k+++a++++i+ +++ w+ ++
  KHJ33684.1 335 FEKFRITL-SNYGGEARTYLENLVIAAGAEFTKSMKQDNTHLITARK--NSEKCQAAQEWGIEMINHLWIEES 404
                 78899999.99999*****************************9999..999******************886 PP

  == domain 5  score: 8.2 bits;  conditional E-value: 0.00091
                 HHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHHTTSEEEETHHHHHHH CS
        BRCT  29 ikehGGkvttevskktthlvvgepesrslkylealklnipivheewlldci 79 
                 +++ G  + t++ + +thl + +   r++k+l a++++  +v+ ++l +c+
  KHJ33684.1 642 LRNAGILI-TQNVSSCTHLAAPSI-VRTKKFLCAIAFGPVVVSTDFLDACL 690
                 55556666.455567999999999.9************************7 PP

  == domain 6  score: 2.1 bits;  conditional E-value: 0.073
                 TTTTTTTEEEEEEESTSSHHHHHHHHHHHHTTCEE...............E CS
        BRCT   2 kellfhgckfvitgvldnftrdeleelikehGGkv...............t 37 
                 k +l++++ +++t v  n t + ++++++ +GG++                
  KHJ33684.1 727 KHNLLRNVPIYCTEVVPN-TPETYKDIVEANGGTFgifrgrqiikkknpkD 776
                 578899999999666666.66777*********986666655555554443 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.1   0.0   0.00012      0.42       3      84 ..       8      98 ..       6      99 .. 0.82
   2 !   18.4   0.0   6.1e-07    0.0022      14      85 .]     114     190 ..     102     190 .. 0.89
   3 !    5.4   0.0    0.0069        25      20      70 ..     255     307 ..     243     316 .. 0.80
   4 !   21.4   0.0     7e-08   0.00025      16      82 ..     345     414 ..     335     417 .. 0.88
   5 !    5.9   0.0    0.0046        17      39      84 ..     652     701 ..     630     702 .. 0.72
   6 !    4.9   0.0    0.0097        35      19      78 ..     744     829 ..     727     836 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00012
      BRCT_2  3 klFeglrFYin..daepspsreklkklIeknGGev....vetitsavyiviaesneee...laekrkrrvvspkyIkdCikkgkllpleny 84
                +++e++ F i+  ++ +++   +lkk  e  G ev     +   ++v+++i+e+ +      a+++  +vv p++I +++ ++k   +++y
  KHJ33684.1  8 CIWENCVFAIVlcSTLQRSRAIDLKKDLELQGAEVttigAKIDVKNVTHIISETIDFPeypIARQHMIPVVIPDWISHSLMRNKEAGIRPY 98
                6889999999887777779999***********99776533335569999999987779********************999986666655 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 6.1e-07
      BRCT_2  14 daepspsreklkklIeknGGevvetitsavyiviaesneee.....laekrkrrvvspkyIkdCikkgkllplenyl 85 
                  ++ps +++ +   + + GG+ +++ t+ +++++a ++++       +++ k +++ p++ +dC+k gk ++  +yl
  KHJ33684.1 114 ADIPSGDKDAIIGAVLAMGGVETNSLTKLTTHICALTTDHPkcqqaIEKNLKCKIILPHWFDDCLKLGKRIDEAPYL 190
                 5688999********************99******9999999*9988899999*******************99996 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.0069
      BRCT_2  20 sreklkklIeknGGevvetitsavyiviaesneee..laekrkrrvvspkyIk 70 
                 s + +++lI+  GG ++++ ++a+++v++ +  ++   a+k++ +v + ++++
  KHJ33684.1 255 SLKVIEDLIKGSGGLITSNVRNADIFVCHWRDGNDyrYASKAGINVGNLSWLY 307
                 556789*****************999998877665777777777777766665 PP

  == domain 4  score: 21.4 bits;  conditional E-value: 7e-08
      BRCT_2  16 epspsreklkklIeknGGevvetitsavyiviaesneee...laekrkrrvvspkyIkdCikkgkllple 82 
                 + ++ r  l+ l+++ G e++++++++++++i++++++e   +a++ + + +++ +I+++ ++++++ l 
  KHJ33684.1 345 YGGEARTYLENLVIAAGAEFTKSMKQDNTHLITARKNSEkcqAAQEWGIEMINHLWIEESYARCEVQRLT 414
                 556899***************************9999999*999999**************999988665 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.0046
      BRCT_2  39 itsavyiviaesneee....laekrkrrvvspkyIkdCikkgkllpleny 84 
                   s+ +++ a+s   +     a   ++ vvs++++++C+++++  ++ +y
  KHJ33684.1 652 NVSSCTHLAAPSIVRTkkflCAIAFGPVVVSTDFLDACLESKDTPDVCDY 701
                 4444566666665555666667777899*************998888777 PP

  == domain 6  score: 4.9 bits;  conditional E-value: 0.0097
      BRCT_2  19 psreklkklIeknGGev..............veti...tsavyiviaesneee...........laekrkrrvvspkyIkdCikkgkl 78 
                 ++ e++k+++e+nGG++              +        + +++i+ + ++e            + +  +r+v ++++ d   +++l
  KHJ33684.1 744 NTPETYKDIVEANGGTFgifrgrqiikkknpK--DddePAEPVYLISGTIKQEknlwpkfakmaREGNMIPRIVITEWLLDTAMAQEL 829
                 677899**********9666655554433331..033222234444444444457777777776666666777777777776666655 PP

>> LIG3_BRCT  DNA ligase 3 BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.1    0.0006       2.1      39      78 ..      50      89 ..      43      92 .. 0.87
   2 !   13.4   0.0   1.9e-05      0.07      29      79 ..     130     181 ..     115     183 .. 0.87
   3 !    9.7   0.0   0.00029         1       6      76 ..     335     405 ..     334     409 .. 0.83
   4 ?    0.1   0.0      0.29     1e+03      34      79 ..     647     693 ..     642     695 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0006
   LIG3_BRCT 39 kekeaTHvvvskkeeskkekeksknakaVtaewiwesIkk 78
                + k++TH++++  +  +  ++ ++   +V+++wi +s  +
  KHJ33684.1 50 DVKNVTHIISETIDFPEYPIARQHMIPVVIPDWISHSLMR 89
                6789*******998888999999*************9866 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 1.9e-05
   LIG3_BRCT  29 AydGdlvkeekekeaTHvvvskke..eskkekeksknakaVtaewiwesIkkr 79 
                 A +G + +++ +k  TH+ +   +  + ++ +ek+ + k + ++w++++ k +
  KHJ33684.1 130 AMGG-VETNSLTKLTTHICALTTDhpKCQQAIEKNLKCKIILPHWFDDCLKLG 181
                 5666.6677788889***9997778899*********************9975 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00029
   LIG3_BRCT   6 Ftgvklfipksv.edykklrRYfiAydGdlvkeekekeaTHvvvskkeeskkekeksknakaVtaewiwesI 76 
                 F+  ++ +++   e+++ l+  +iA +++  k +++++ TH ++  k+ +k +++++ + + +   wi es 
  KHJ33684.1 335 FEKFRITLSNYGgEARTYLENLVIAAGAEFTK-SMKQDNTHLITARKNSEKCQAAQEWGIEMINHLWIEESY 405
                 55666666666557777888899999998877.888999******9999999999999**********9985 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.29
   LIG3_BRCT  34 lvkeekekeaTHvvvskke.eskkekeksknakaVtaewiwesIkkr 79 
                 ++  ++ +++TH  +++ +  +k   + + +  +V+ ++++++ + +
  KHJ33684.1 647 ILITQNVSSCTHLAAPSIVrTKKFLCAIAFGPVVVSTDFLDACLESK 693
                 55568899999999997763333445666777788888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (840 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.40
# Mc/sec: 6241.64
//
Query:       KHJ33685.1  [L=326]
Description: putative alkaline ceramidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   8.7e-100  333.5  14.5      1e-99  333.3  14.5    1.0  1  Ceramidase  Ceramidase


Domain annotation for each model (and alignments):
>> Ceramidase  Ceramidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  333.3  14.5  5.6e-104     1e-99       1     263 []      18     306 ..      18     306 .. 0.98

  Alignments for each domain:
  == domain 1  score: 333.3 bits;  conditional E-value: 5.6e-104
  Ceramidase   1 gyWgpvtStidwCEenYvvtpyiAEfvNTlsnllfillallgiynaakkklekrfllaylglalvGlgSalFHaTLkyetQllDelsmiyatalvlyav 99 
                 gyW pvtSt++wCEe+Y++t y+AE+vNT++nl+f++l+++g++n++k++++++f +a+lg+++vGlgS++FH+TLky++Ql+Delsmiy+++ ++ya+
  KHJ33685.1  18 GYWAPVTSTLNWCEEDYYATLYSAEIVNTVTNLIFFILGIKGLRNCIKYNHDSAFKIAFLGYLFVGLGSFAFHSTLKYSMQLVDELSMIYTVCFMCYAT 116
                 8************************************************************************************************** PP

  Ceramidase 100 fsekksrstrvllgvlltalavvvtllylvlkepvlhqvafalltvlvllrsiyliekkv...........................dksdeaakkevk 171
                 fs +ks+ ++++lg++l++l+  +tl y++lk p++hqvaf++l+v+vl+rs+y++e ++                            k+d +  ++++
  KHJ33685.1 117 FSLEKSKIFQKMLGFGLLFLSSSITLSYHYLKVPAFHQVAFGVLIVTVLFRSMYVMEFRIrkslrekyalafhkdsidlvssnysreIKNDIDMLNKMW 215
                 *********************************************************999999999999999************999556999****** PP

  Ceramidase 172 klallgliifllgfliWnlDnlfCstltrlrraiglplgvllelHgwWHiltgigayilivlleylrvekkgkedselelawpsrlgvlPev 263
                  ++ +gl++f+ gf+iWnlDn +Cstl+++r++iglp+g+lle+HgwWH +tg+++yi++v++++lr+ ++++++ e+ l+wps ++++Pev
  KHJ33685.1 216 LMVGFGLLLFVGGFVIWNLDNRYCSTLRHWRHNIGLPWGILLEGHGWWHAMTGYATYIYLVWGIWLRYYLNNRQR-EFGLHWPSIYFSIPEV 306
                 **************************************************************************8.8*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       829  (0.0462379); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2390.61
//
Query:       KHJ33686.1  [L=806]
Description: putative serine-threonine protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-54  185.6   0.0    1.9e-54  184.8   0.0    1.4  1  Pkinase          Protein kinase domain
    9.4e-23   80.8   0.0    2.1e-22   79.7   0.0    1.6  2  Pkinase_Tyr      Protein tyrosine kinase
  ------ inclusion threshold ------
      0.014   14.4   0.0      0.023   13.7   0.0    1.2  1  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.8   0.0   3.1e-58   1.9e-54       1     264 []     485     801 ..     485     801 .. 0.92

  Alignments for each domain:
  == domain 1  score: 184.8 bits;  conditional E-value: 3.1e-58
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS......CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH... CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk......hpnivrlyevfeekdelylvleyveggeladlle... 90 
                 y+++ +lG+G f+ V++a++ +t+k vA+K i+++++  k     l+E++il+kl+       ++i+r+ + fe+k +l++v+e ++ + l ++l+   
  KHJ33686.1 485 YHVQANLGKGMFSGVVRAMDVTTKKLVAIKLIRNNETMRKA---GLKEVEILQKLRdadpddKKHIIRFERQFEHKGHLCMVFENLSIN-LREVLKkfg 579
                 78899****************************99877755...6**********988777889***********************77.999999898 PP

                 HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTE.EEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHH CS
     Pkinase  91 rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekge.lKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslGvily 188
                 r++ ++ + ++ +a+q+l gl+ + + +i+H DlKp+NiL++++++ lKi+D+G a+ ++ ++    + +++ Y+APE++ + +y+ ++D+Ws+G++ly
  KHJ33686.1 580 RDVGINLRAVRAYAQQMLLGLSLIRKCNILHADLKPDNILVSKNRNlLKICDLGSASDASDNE-IAPYLVSRFYRAPEIIIGMPYDFAIDMWSVGCTLY 677
                 8889**************************************65556**************88.*********************************** PP

                 HHHHSS-STTTSSHHHHHHHHHHT.HHHHHHHCTSHH...HHHTTS...............................................-HHHHH CS
     Pkinase 189 elltgkppfsgekgkekvekeldq.lekilkilgetkeklpeasei...............................................seeakd 239
                 el+tgk +f g+++++  ++++d   + + k+l+  +++  + +e+                                                + ++d
  KHJ33686.1 678 ELYTGKILFTGRTNNQMLRSIMDCrGKLTSKMLKRARFAHIHFDEMgnfrsveqdkatgkdviktlfftkptrdlrtrllsttkglsetetkeISLFTD 776
                 **********9999997777777755556666666666666666668889999*************************************9888889** PP

                 HHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 240 llkkllkkdpkkRltaeellqhpyl 264
                 +l+++l+ +p+kR+t +e+l+hp++
  KHJ33686.1 777 FLDRCLALNPEKRITPTEALKHPFI 801
                 ***********************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.7   0.0   3.4e-26   2.1e-22       3     220 ..     487     700 ..     485     718 .. 0.87
   2 ?   -3.4   0.0      0.77   4.6e+03     234     251 ..     774     791 ..     755     795 .. 0.79

  Alignments for each domain:
  == domain 1  score: 79.7 bits;  conditional E-value: 3.4e-26
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-.....BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHH CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.k.....hpnivkllgvctkeepllivteyvkgGdLlkfLrk 94 
                  ++ +lG+G f+ Vv++       +++  Va+K ++++ t +  ++ l+e++i++kl +     +++i+++     ++++l++v+e ++  +L++ L+k
   KHJ33686.1 487 VQANLGKGMFSGVVRAMDV----TTKKLVAIKLIRNNETMR--KAGLKEVEILQKLrDadpddKKHIIRFERQFEHKGHLCMVFENLSI-NLREVLKK 577
                  6789***********9988....88999******7766665..8999******999434444458********************9987.89999999 PP

                  T.CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETT.EEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHH CS
  Pkinase_Tyr  95 k.ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenk.vvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWs 190
                    ++  ++l+ +  +a+q+  G++ + + +++H dl   N+L+s+n+ + ki+D G a+d  +    ++     ++  + apE++  + +  + D+Ws
   KHJ33686.1 578 FgRDVGINLRAVRAYAQQMLLGLSLIRKCNILHADLKPDNILVSKNRnLLKICDLGSASDA-S---DNEIAPYLVSRFYRAPEIIIGMPYDFAIDMWS 671
                  7345578899999*******************************976599*********99.2...23345667888999****************** PP

                  HHHHHHHHHTTSSGTTTTSHHHHHHHHHHT CS
  Pkinase_Tyr 191 fGvllwEiftlgespypglkneevleklke 220
                   G +l+E++t g+  ++g +n+++l+ + +
   KHJ33686.1 672 VGCTLYELYT-GKILFTGRTNNQMLRSIMD 700
                  **********.***********99998844 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.77
                  HHHHHHHHT-SSGGGS-- CS
  Pkinase_Tyr 234 lyelmkkcweedpeeRpt 251
                  +++++ +c++ +pe+R t
   KHJ33686.1 774 FTDFLDRCLALNPEKRIT 791
                  568899*********986 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   3.9e-06     0.023     296     321 ..     604     629 ..     571     634 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 3.9e-06
  Pox_ser-thr_kin 296 dcenflhvDlkPdniLifdskeklii 321
                       + n lh+DlkPdniL+ ++++ l+i
       KHJ33686.1 604 RKCNILHADLKPDNILVSKNRNLLKI 629
                      33478************999988877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (806 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       800  (0.0446204); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.42
# Mc/sec: 5819.59
//
Query:       KHJ33687.1  [L=311]
Description: putative solute carrier family 25 member 38 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.5e-52  174.3   2.2    8.5e-19   67.3   0.0    3.1  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7   0.0   4.5e-15   8.1e-11       3      95 ..       8      94 ..       6      96 .. 0.90
   2 !   64.1   0.1   4.8e-22   8.6e-18       3      93 ..     118     203 ..     116     206 .. 0.96
   3 !   67.3   0.0   4.8e-23   8.5e-19       4      93 ..     224     308 ..     221     311 .] 0.94

  Alignments for each domain:
  == domain 1  score: 41.7 bits;  conditional E-value: 4.5e-15
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHH.HHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr  3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiyk.eeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95
                +sv+ + + G+l+g++++++ +P d++Ktrlq +++ss       ++d+++ +   ++ +  ++rG +++ lr+ + sa++f + + l++ + k
  KHJ33687.1  8 KSVTGSSIPGLLSGICSAVLLQPADLLKTRLQQSGRSS-------LFDTFYDVSNsSHTVYQFWRGTTASALRTGIGSAIYFPSLNILRQKIAK 94
                677888999***********************999996.......899***999747889**********************999998888776 PP

  == domain 2  score: 64.1 bits;  conditional E-value: 4.8e-22
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 ls +++l++G++a ++a+++ +P+ ++K+r+ ++  ++k+     il +   i+k+eG +g++ G++++  r ap++++++++ye++k+ l
  KHJ33687.1 118 LSNFANLITGAIARSFAGFMLMPMTIIKVRFESNLYTYKS-----ILGAGIDILKTEGCKGFFAGVGATTARDAPYAGIYVLFYEQFKKKL 203
                 7889*********************************999.....*******************************************987 PP

  == domain 3  score: 67.3 bits;  conditional E-value: 4.8e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 s+  ++++G++a+ +at +t+P+d +Ktr+q+q+k + +     ++ + kki++eeG + ++ Gl+ ++ r a +sal ++lye ++r +
  KHJ33687.1 224 SASVNFASGMIAAGFATALTNPFDAIKTRIQLQPKVYPN-----VFYAAKKIMREEGPKPFFNGLGLRIARKALSSALAWTLYEEVIRRV 308
                 67789*******************************998.....9***************************************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2502.21
//
Query:       KHJ33688.1  [L=193]
Description: putative vacuolar protein-sorting-associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-53  180.4   0.6    2.1e-53  180.4   0.6    1.4  2  ESCRT-II    ESCRT-II complex subunit
  ------ inclusion threshold ------
      0.011   15.1   2.2       0.18   11.2   0.2    2.1  2  Caps_synth  Capsular polysaccharide synthesis protein


Domain annotation for each model (and alignments):
>> ESCRT-II  ESCRT-II complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.4   0.6   2.3e-57   2.1e-53       1     139 [.      13     161 ..      13     162 .. 0.94
   2 ?   -2.6   0.0      0.69   6.2e+03      70      89 ..     167     186 ..     163     190 .. 0.72

  Alignments for each domain:
  == domain 1  score: 180.4 bits;  conditional E-value: 2.3e-57
    ESCRT-II   1 eysFpPfFTlqpnlttrkkqlekWsslilaycrhhrifklslseaeeeeeeselFknkkinRrlsledirevleelvkkgraewv.............. 85 
                 +y FpPfFTlqpn+tt+++ql+kW+ +il+y+rhhr+fklsls+    + +selF++kk+ +rls+ed+ ev+e+++k+graew+              
  KHJ33688.1  13 YYFFPPFFTLQPNTTTKHAQLQKWTMFILSYARHHRLFKLSLSD----SLDSELFNHKKLGKRLSREDATEVIEFMRKQGRAEWInsgsskgnsssesa 107
                 599****************************************3....4567*********************************99999988888776 PP

    ESCRT-II  86 dkekskalvywrtpeewasliyewveetgqkgsvlTlyeLtegdetrgeefhgl 139
                 + ++ +++v+w+++eew+++i +wv+etgqk+ vlTlyeLteg+++ ++efhgl
  KHJ33688.1 108 GANSGVFWVWWKNVEEWGEAIADWVDETGQKNMVLTLYELTEGESSLSQEFHGL 161
                 66668999********************************************98 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.69
    ESCRT-II  70 revleelvkkgraewvdkek 89 
                 ++ l++lvk+g+a++ ++e+
  KHJ33688.1 167 QKALAKLVKRGKAQVFGQED 186
                 66788899999998886654 PP

>> Caps_synth  Capsular polysaccharide synthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.2     2e-05      0.18     139     183 ..       9      52 ..       6      59 .. 0.88
   2 ?    4.0   0.2     0.003        27      10      85 ..      69     148 ..      60     178 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2e-05
  Caps_synth 139 klpsellkkdfftfkssekksnkislssWtsfflaakknnpllsl 183
                 ++ps+++   fft+ ++++++++ +l++Wt f+l+  ++++l++l
  KHJ33688.1   9 EFPSYYFFPPFFTL-QPNTTTKHAQLQKWTMFILSYARHHRLFKL 52 
                 78999********9.777788899*********99999**99986 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.003
  Caps_synth  10 qkkseekkekvilkklkkklkkkleefdkkkkkeeenekk....IWvlWlqGldnaPeiVkkciksvkknaedyevvlLt 85 
                  k+  ++++  + ++++k+ + + ++  ++k ++ ++       ++++W+  +++  e +   +++  + +   ++  Lt
  KHJ33688.1  69 GKRLSREDATEVIEFMRKQGRAEWINSGSSKGNSSSESAGansgVFWVWWKNVEEWGEAIADWVDETGQKNMVLTLYELT 148
                 45555555566666666666666555544444443333333667******999999999988888776666555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       687  (0.0383178); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1456.66
//
Query:       KHJ33689.1  [L=461]
Description: hypothetical protein EV44_g3116 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       774  (0.0431703); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 3256.49
//
Query:       KHJ33690.1  [L=750]
Description: hypothetical protein EV44_g3111 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-17   64.0   0.0    2.5e-17   63.4   0.0    1.2  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.4   0.0   1.4e-21   2.5e-17       3     195 ..     259     453 ..     255     487 .. 0.81

  Alignments for each domain:
  == domain 1  score: 63.4 bits;  conditional E-value: 1.4e-21
       RVT_2   3 yrlvslPkdrkaigsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaaeee...lvvhqldvdsafLnaeldee..vy 96 
                  ++ + P + +   +r+v ++k+   +++  k+rlv+qG++    +    + aP i+ +s r+llala++ +   + ++  d++ a++++  + +  ++
  KHJ33690.1 259 VSISDIPLNSRIFNTRFVDKIKHPGTNKAFKKSRLVVQGYNDEG-KFMILTQAPTIQRSSQRILLALASMLQgngVNLYLRDISQAYVQSSTNLNriIF 356
                 456688*****************9999999**********9865.4455899****************9864222789999*******98766555488 PP

       RVT_2  97 vkqPpGfeidreeekvykLnkslyGlkqapllWnekid.kvLkklgferseaesGlyvrgtgegklivalyvddlliagsdikiledvkkelakkfklk 194
                 v++P     +  ++ v+++ k lyGl  a   W+ + + + ++kl++++s+    l      +   iv++  dd l  +++i   ++ k+   +kf  k
  KHJ33690.1 357 VQPPLEV--ELPPNTVWQVLKPLYGLAEARNHWFSTYHrHHIEKLEMSPSTYDPCLLYSI-KDCMGIVGMQTDDTLFLADKIFADKEQKELKIAKFLAK 452
                 8777655..556*********************98876267999******9998876655.677889*******9999988877777766666666665 PP

       RVT_2 195 d 195
                 d
  KHJ33690.1 453 D 453
                 5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (750 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.23s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 5504.50
//
Query:       KHJ33691.1  [L=155]
Description: hypothetical protein EV44_g3471 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1271.31
//
Query:       KHJ33692.1  [L=554]
Description: putative phosphoglucomutase 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.8e-33  112.8   0.0    1.4e-32  112.3   0.0    1.2  1  PGM_PMM_I    Phosphoglucomutase/phosphomannomutase, alpha/bet
    2.7e-25   88.8   0.0    7.6e-25   87.3   0.0    1.8  1  PGM_PMM_III  Phosphoglucomutase/phosphomannomutase, alpha/bet
    3.9e-14   53.1   0.0    7.8e-14   52.2   0.0    1.5  1  PGM_PMM_II   Phosphoglucomutase/phosphomannomutase, alpha/bet
    5.9e-07   29.6   0.0    1.2e-06   28.6   0.0    1.4  1  PGM_PMM_IV   Phosphoglucomutase/phosphomannomutase, C-termina


Domain annotation for each model (and alignments):
>> PGM_PMM_I  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.3   0.0   3.2e-36   1.4e-32       2     137 ..      14     154 ..      13     155 .. 0.95

  Alignments for each domain:
  == domain 1  score: 112.3 bits;  conditional E-value: 3.2e-36
                 GGBBTTCEEEECCHCTBSCCHHHHHHHHHHHHCHHCSTS-EEEEEE-S-TTHHHHHHHHHHHHHCCT-CEEEEE...EB-HHHHHHHHHHCCECEEEEE CS
   PGM_PMM_I   2 qkfgtsGlRgkvgegeltpelveklgqaiaeylkaeakkkkvvvGrDtRvssrelaealaaglaanGvevillg...llptPavsfairklkadagimi 97 
                 qk+gtsGlR+kv +++ +p++ e+++ +i+  +++  +++++v+G+D+R+ + e+++ +a++ aa Gv+++l+g   +l+tPa+s++irk+ka +gi +
  KHJ33692.1  14 QKPGTSGLRKKVVVFQ-QPHYSESFVTSIILSIPEGYEGSTLVIGGDGRYWNLEVIQLIAKISAAYGVKKLLIGqagILSTPAASHIIRKYKATGGILL 111
                 899**********997.********************************************************************************** PP

                 --TTS-TTCCC...EEEEETTTCE--CHHHHHHHHHHCCT-EE CS
   PGM_PMM_I  98 taSHnppeyng...iKvylsnGgpispeveekIeaiiekeeea 137
                 taSHn +++++   iK++ls+Ggp++++v++kI +  ++ +++
  KHJ33692.1 112 TASHNAGGPKNdfgIKYNLSHGGPAPESVTNKIFEVSKNLTSY 154
                 *****766665566*******************9999888765 PP

>> PGM_PMM_III  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.3   0.0   1.7e-28   7.6e-25       1     101 [.     296     397 ..     296     417 .. 0.85

  Alignments for each domain:
  == domain 1  score: 87.3 bits;  conditional E-value: 1.7e-28
                  HHHHHHHHHHHHHHCH.CSTTTC.EEEEETTS-THHHHHHHHTT-EEEEESSSCHHHHHHHHHTTECEEEETT.CEEEETTTBSS--HHHHHHHHHHH CS
  PGM_PMM_III   1 dgdqllallakyllee.klkpga.gvvktvmtslalervakklgiklvetkvGdkyvleemkeegavlGgEeS.ghiifldeattkDGilaallvlei 95 
                  +gd+l++++ ++ l    +k+g  g +++++ts+a++ vak++g+ ++e+++G+k++++++++++++++gEeS g+ +++ +  +kDG++a++++l+i
   KHJ33692.1 296 PGDSLAIIAHHAQLIPyFKKQGLyGFARSMPTSSAIDLVAKAKGLDCYEVPTGWKFFCALFDANKLSICGEESfGTSSNHIR--EKDGLWAVMAWLNI 391
                  5899999999877777855566669************************************************888888877..8************* PP

                  HHHHTS CS
  PGM_PMM_III  96 laetgk 101
                  +a  gk
   KHJ33692.1 392 IAGIGK 397
                  *94433 PP

>> PGM_PMM_II  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.2   0.0   1.7e-17   7.8e-14       2      99 ..     185     288 ..     184     291 .. 0.88

  Alignments for each domain:
  == domain 1  score: 52.2 bits;  conditional E-value: 1.7e-17
                 HHHHHGGGTS-....HHHHHHH.....T-EEEEE-TT-TTHHHHHHHHHH.TT-.EEEES-----TT-TTSS----TT-TTTTHHHHGGGGG-SEEEEE CS
  PGM_PMM_II   2 aYiealkekvd....seaikks.....glkvvidplhGaggeilkellke.lgv.dvvelnaepdpdfptkapnpeekealkllielvkkegadlglaf 89 
                 +Yi++lke++d    +    +      ++k+++d+lhG++g +   ++++ lg+      n+ p+pdf +++p+p+   + ++l+++v++ +  +g+a 
  KHJ33692.1 185 DYIHMLKEIFDfdliK----EFfrthpDFKILFDALHGVTGPYGCAIFEKeLGLpSSSVQNCIPSPDFNGGHPDPNM-TYAQSLVQAVDQGNIPFGAAS 278
                 7**********55543....43444579********************987999655569*****************.********************* PP

                 -TTS-BEEEE CS
  PGM_PMM_II  90 DgDaDRlgvv 99 
                 DgD+DR ++ 
  KHJ33692.1 279 DGDGDRNMIY 288
                 ******9985 PP

>> PGM_PMM_IV  Phosphoglucomutase/phosphomannomutase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   2.6e-10   1.2e-06      24      62 ..     477     519 ..     437     529 .. 0.83

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 2.6e-10
                 HCCCCCCCCGCCEEEE.EEEETTCCE...EEEEEEES.SHHHH CS
  PGM_PMM_IV  24 sikeglkilledGrrlavRpSGTepl...lrvyvEak.sdeel 62 
                 s ++gl ++l dG+r+++R SGT++    +r+y+E++ +d+e+
  KHJ33692.1 477 SSNQGLYVKLSDGTRFVIRLSGTGSSgatIRLYIERHtTDAET 519
                 579**********************************777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       342  (0.0190752); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.37
# Mc/sec: 4535.46
//
Query:       KHJ33693.1  [L=500]
Description: putative mitochondrial import inner membrane translocase subunit tim44 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-32  111.0   0.0    1.1e-31  109.9   0.0    1.6  1  Tim44     Tim44-like domain
  ------ inclusion threshold ------
        1.2    9.2   9.5       0.31   11.1   5.9    1.7  2  Med7      MED7 protein


Domain annotation for each model (and alignments):
>> Tim44  Tim44-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.9   0.0   1.2e-35   1.1e-31       2     147 .]     341     494 ..     340     494 .. 0.97

  Alignments for each domain:
  == domain 1  score: 109.9 bits;  conditional E-value: 1.2e-35
                 HHHHHHHHHH-TT--HHHHHHHHHHTHHH.HHHHHHHT-HHHHHHHB-HHHHHHHHHHHHHHHHTT-EE--EEEEEEEEEEEEEEEE..TTEEEEEEEE CS
       Tim44   2 asalaaikqrdpsFdkeeFleeakeayep.ileayakgDletLrkllteevyeefkaeikerakqgltldaellgirevdlkeakie..gdtavltvrf 97 
                 a ++++i+++dp+F+ e F++e++e++ p +l+ay+kgD etL+ +l+ + ++++ a  ke++ +gl++d ++l+ir+v++ +a+i   g+++v+++++
  KHJ33693.1 341 ALVIKKIREMDPTFQIEPFVQEMREYILPeVLDAYVKGDSETLKLWLSAAQFHVYDALSKEYTIAGLKSDGRILDIRNVEILSARILepGSVPVFILSC 439
                 6789**********************************************************************************99*********** PP

                 EEEEE-E.E-TTS.-EEEE-TT--EEEEEEEEEEE-...-S-G.GG-EEEEEEEE CS
       Tim44  98 rtqqisv.tddatGevveGdedkvvevrevwtfeRd...lgse.dpnWrLveiqa 147
                 rtq+++v ++ +t e+++G ed+++ v++++ ++R    ++++ +++WrL+e+q+
  KHJ33693.1 440 RTQEVHVyRKIKTNELAAGMEDRIQLVTYAIGVTRIqedIQNPeTRGWRLIELQK 494
                 *******9999************************999988888********985 PP

>> Med7  MED7 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   5.9   3.4e-05      0.31      15     100 ..      73     157 ..      61     166 .. 0.51
   2 ?   -2.0   0.1      0.35   3.1e+03      32      76 ..     261     302 ..     243     315 .. 0.53

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.4e-05
        Med7  15 teenlkklkelkeeaekeeeeeedesaae.......eqelelpkeLrvlipPeppk..egeYrvFGenwsl.......lkdklpsLeeqgieqlyeede 97 
                  +e++++  ++++++++ee+                +      ++ +  +pP+pp   ++ ++vF e+ +         k++++ L  +g +ql  e+e
  KHJ33693.1  73 AQEDKSN--STNQKTKSEED--------AsnfqrgnK-----KEQQKENQPPPPPHgeKSPWQVFTETLQSefnaskeWKESTKAL-AAGAQQLT-ENE 154
                 2222222..22222222222........123322221.....2223344688888555999*******998666666434444333.34666666.555 PP

        Med7  98 sed 100
                 s+ 
  KHJ33693.1 155 SVR 157
                 555 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.35
        Med7  32 eeeeeedesaaeeqelelpkeLrvli.pPeppkegeYrvFGenwsl 76 
                 ++ +e+ +    e   ++p++  +l+   + p+++++r F +  +l
  KHJ33693.1 261 SSGTENMH----EAARNNPSTNVYLTlHKDAPWKESWREFRDSNKL 302
                 22222222....2233344433355535577888999988887775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1466  (0.081767); expected 358.6 (0.02)
Passed bias filter:                      582  (0.0324614); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.30s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 3461.23
//
Query:       KHJ33694.1  [L=338]
Description: putative transcription initiation factor iib [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.4e-34  116.1   0.1    1.1e-17   63.8   0.2    2.3  2  TFIIB         Transcription factor TFIIB repeat
    1.6e-13   49.9   1.8    2.9e-13   49.1   1.8    1.4  1  TF_Zn_Ribbon  TFIIB zinc-binding
     0.0017   18.2   0.0        1.4    8.8   0.0    2.4  2  HTH_5         Bacterial regulatory protein, arsR family
  ------ inclusion threshold ------
      0.013   14.9   0.6       0.25   10.8   0.0    2.5  2  zf-ribbon_3   zinc-ribbon domain
       0.17   11.6   0.0        0.4   10.4   0.0    1.6  1  Sigma70_r4_2  Sigma-70, region 4
        0.2   11.2   0.0       0.95    9.0   0.0    2.2  2  Sigma70_r4    Sigma-70, region 4
       0.21   11.7   0.0         11    6.2   0.0    2.4  2  HTH_20        Helix-turn-helix domain


Domain annotation for each model (and alignments):
>> TFIIB  Transcription factor TFIIB repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.8   0.2   4.4e-21   1.1e-17       4      71 .]     128     195 ..     125     195 .. 0.97
   2 !   50.1   0.0   8.2e-17   2.1e-13       2      71 .]     236     305 ..     235     305 .. 0.98

  Alignments for each domain:
  == domain 1  score: 63.8 bits;  conditional E-value: 4.4e-21
                 HHHHTT--HHHHHHHHHHHHHHTTSTTTTSGCTTHHHTTHHHHHHTTTTSS--HHHHHHHSS--SHHH CS
       TFIIB   4 fadaleLpekVadaAkelaklaleekvlkGrspagiaAAclyiAcrkeevkrtqkeissvlqVsekti 71 
                  +da+  p+ V+d Ak l+k++ + k  kG+s+++i+A c++iAcrk    rt++ei ++++Vs+k+i
  KHJ33694.1 128 HCDAISAPKVVTDYAKLLYKQVDDAKAFKGKSQEAIIAGCIFIACRKGDAPRTFREIYALTKVSKKEI 195
                 59****************************************************************98 PP

  == domain 2  score: 50.1 bits;  conditional E-value: 8.2e-17
                 HHHHHHTT--HHHHHHHHHHHHHHTTSTTTTSGCTTHHHTTHHHHHHTTTTSS--HHHHHHHSS--SHHH CS
       TFIIB   2 krfadaleLpekVadaAkelaklaleekvlkGrspagiaAAclyiAcrkeevkrtqkeissvlqVsekti 71 
                 +rf+++l+L  +  +   +la++ ++ + l+Grsp ++aAAc+y+ + + +  +++keis+v+ Vs+ ti
  KHJ33694.1 236 ERFCSQLGLDFQFVKISGQLADKISNVGDLAGRSPLSVAAACIYMISHLMNKPKSPKEISEVAGVSDGTI 305
                 59*****************************************************************998 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.1   1.8   1.1e-16   2.9e-13       2      43 .]      18      61 ..      17      61 .. 0.95

  Alignments for each domain:
  == domain 1  score: 49.1 bits;  conditional E-value: 1.1e-16
                  EETTTTC.EE.CHEETSTTCEEESSSSBEEEECCCCCCCHHHHH CS
  TF_Zn_Ribbon  2 kCPnCgs.tn.lveDpergelvCtdCGlVlednsidegpewref 43
                  +CP+C   +  lve++++g++vC++CGlVl d+++d ++ewr+f
    KHJ33694.1 18 ICPECREvPPnLVEEFSSGDMVCGSCGLVLGDRIVDTRSEWRTF 61
                  7******8667********************************8 PP

>> HTH_5  Bacterial regulatory protein, arsR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0024       6.1      14      41 ..     177     204 ..     173     204 .. 0.92
   2 !    8.8   0.0   0.00056       1.4       7      33 ..     280     306 ..     278     315 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0024
                 SSEEHHHHHHHHTS-HHHHHHHHHHHHH CS
       HTH_5  14 gelcvcelaeelglsqstvShHLkkLre 41 
                  ++++ e+ + +++s+  + + +k+L++
  KHJ33694.1 177 APRTFREIYALTKVSKKEIGRTFKALEK 204
                 79*******************9999986 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00056
                 HHHHHTTSSEEHHHHHHHHTS-HHHHH CS
       HTH_5   7 ILklLaegelcvcelaeelglsqstvS 33 
                 +++ L++++++  e++e  g+s +t++
  KHJ33694.1 280 MISHLMNKPKSPKEISEVAGVSDGTIR 306
                 577899*******************97 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1      0.06   1.5e+02      17      22 ..      17      22 ..      15      26 .. 0.66
   2 ?   10.8   0.0   9.9e-05      0.25      13      26 .]      34      47 ..      31      47 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.06
  zf-ribbon_3 17 nvCpyC 22
                 ++Cp C
   KHJ33694.1 17 VICPEC 22
                 456665 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 9.9e-05
  zf-ribbon_3 13 ssddnvCpyCGtkl 26
                 ss+d+vC +CG +l
   KHJ33694.1 34 SSGDMVCGSCGLVL 47
                 79*********987 PP

>> Sigma70_r4_2  Sigma-70, region 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00016       0.4      28      47 ..     290     309 ..     289     310 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00016
                   -HHHHHHHHT--HHHHHHHH CS
  Sigma70_r4_2  28 sykEIAellgisegtVksrl 47 
                   s kEI+e+ g+s+gt+++++
    KHJ33694.1 290 SPKEISEVAGVSDGTIRTAY 309
                   78***************987 PP

>> Sigma70_r4  Sigma-70, region 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.84   2.1e+03      21      26 ..     179     184 ..     170     200 .. 0.53
   2 ?    9.0   0.0   0.00037      0.95      19      43 ..     287     311 ..     275     321 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.84
                 --HHHH CS
  Sigma70_r4  21 lTleEI 26 
                 +T+ EI
  KHJ33694.1 179 RTFREI 184
                 555555 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00037
                 TT--HHHHHHHHTS-HHHHHHHHHH CS
  Sigma70_r4  19 eglTleEIgerlgiSrerVrqiekr 43 
                 ++ + +EI+e+ g+S +++r   k+
  KHJ33694.1 287 KPKSPKEISEVAGVSDGTIRTAYKY 311
                 677889**************87765 PP

>> HTH_20  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0042        11      21      50 ..     175     204 ..     162     205 .. 0.92
   2 ?    2.7   0.0     0.052   1.3e+02      16      42 ..     281     306 ..     278     310 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0042
                 TCTTB-HHHHHHHHTS-HHHHHHHHHHHHH CS
      HTH_20  21 raegltaselaerldlskntlsyHLrvLee 50 
                 +++++t+ e+ ++  +sk+++ + +++Le+
  KHJ33694.1 175 GDAPRTFREIYALTKVSKKEIGRTFKALEK 204
                 689*************************96 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.052
                 HHHHSTCTTB-HHHHHHHHTS-HHHHH CS
      HTH_20  16 lraLaraegltaselaerldlskntls 42 
                  ++L  +++ +++e+ e  ++s+ t++
  KHJ33694.1 281 ISHL-MNKPKSPKEISEVAGVSDGTIR 306
                 6899.9*************99988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       673  (0.037537); expected 358.6 (0.02)
Passed bias filter:                      626  (0.0349155); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 2655.20
//
Query:       KHJ33695.1  [L=394]
Description: putative gtp-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-33  114.8   0.0    3.7e-33  113.6   0.0    1.7  1  YchF-GTPase_C  Protein of unknown function (DUF933)
    7.3e-17   61.5   0.0    2.4e-16   59.8   0.0    1.8  2  MMR_HSR1       50S ribosome-binding GTPase
    0.00087   18.8   0.0     0.0016   18.0   0.0    1.4  1  FeoB_N         Ferrous iron transport protein B
     0.0057   16.7   0.0      0.013   15.6   0.0    1.6  1  TGS            TGS domain


Domain annotation for each model (and alignments):
>> YchF-GTPase_C  Protein of unknown function (DUF933)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.6   0.0   8.3e-37   3.7e-33       1      82 [.     307     388 ..     307     390 .. 0.98

  Alignments for each domain:
  == domain 1  score: 113.6 bits;  conditional E-value: 8.3e-37
  YchF-GTPase_C   1 LitffTaGekevraWtikkgttapqaAgviHsDfekgFiraevikyedlvelgseaaakeagklrlegkdyvvqdgDiilfk 82 
                    L +ffT+G++evr+Wti++gt+apqaAgviH Dfek+Fi+a v++++ l+elg ea+++++gk+ ++gkdyvv+dgDi+l+k
     KHJ33695.1 307 LGSFFTTGPDEVRQWTIRNGTKAPQAAGVIHGDFEKTFIQAIVYNFSVLKELGDEAEVRAKGKILTKGKDYVVEDGDILLIK 388
                    679****************************************************************************998 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.8   0.0   5.3e-20   2.4e-16       3      87 ..      24     132 ..      22     170 .. 0.80
   2 ?   -1.3   0.0       0.5   2.3e+03      74      97 ..     221     245 ..     158     264 .. 0.68

  Alignments for each domain:
  == domain 1  score: 59.8 bits;  conditional E-value: 5.3e-20
                 EEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEE.................EEEEECGGCSSHHHHHHHHHHHHHHHHC.TSEEEEE CS
    MMR_HSR1   3 aivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgke.................ielvDtpGliegaseekglgkaflalee.adlillv 82 
                 +ivG  NvGKStL++a+t+      +++p++T+d++e rv + +++                 ++++D++Gl  gas++ glg+afl++++ +d+i+ v
  KHJ33695.1  24 GIVGLANVGKSTLFQAITKChLGNPANFPFATIDPEESRVIVPDERfdwlcekyqpksrvpahLTIYDIAGLTRGASTGAGLGNAFLSHIRaVDAIFQV 122
                 8******************857899**************994443356666666667777777********888*****************55****** PP

                 EETT.....T CS
    MMR_HSR1  83 vdas.....e 87 
                 v++       
  KHJ33695.1 123 VRCFddaeiI 132
                 *988543330 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.5
                 HCTSEEEEEEETTTT.CSHHHHHHH CS
    MMR_HSR1  74 eeadlillvvdasee.klkpldeel 97 
                   a+ +++++++se+  +++++++l
  KHJ33695.1 221 LTAKPVVYLINLSEKdYIRKKNKHL 245
                 3456677777777331333344444 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   3.6e-07    0.0016       5      44 ..      25      65 ..      21      72 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 3.6e-07
                EEESTTSSHHHHHHHHHTTSE.EEEESTTSSSEEEEEEEEE CS
      FeoB_N  5 lvGnpnvGkttlfnaltgakq.kvgNwpGvtvekkegklkl 44
                +vG  nvGk+tlf a+t+ +  + +N+p  t++ +e ++ +
  KHJ33695.1 25 IVGLANVGKSTLFQAITKCHLgNPANFPFATIDPEESRVIV 65
                89****************9963789********99987765 PP

>> TGS  TGS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   2.8e-06     0.013      13      58 ..     323     387 ..     311     389 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2.8e-06
                 EETTB-HHHHHHHHSTTHHHHEEEEEECS...................EEEETTSBB-SSEEEEE CS
         TGS  13 lprgatveDfAykIhrslakkfiyAlVnG...................qrvgldhvLedgdvveI 58 
                 +++g+ + ++A  Ih ++ k+fi A+V                        g d+v+edgd++ I
  KHJ33695.1 323 IRNGTKAPQAAGVIHGDFEKTFIQAIVYNfsvlkelgdeaevrakgkiLTKGKDYVVEDGDILLI 387
                 778888999*************************************9889************988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 2700.96
//
Query:       KHJ33696.1  [L=857]
Description: putative dynein heavy chain-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.069   13.3   0.1       0.22   11.7   0.1    1.8  2  Rad9_Rad53_bind  Fungal Rad9-like Rad53-binding
      0.092   12.6   4.5       0.24   11.3   4.5    1.6  1  GIT_CC           GIT coiled-coil Rho guanine nucleotide excha


Domain annotation for each model (and alignments):
>> Rad9_Rad53_bind  Fungal Rad9-like Rad53-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.94   8.5e+03      74      96 ..     443     466 ..     439     468 .. 0.68
   2 ?   11.7   0.1   2.4e-05      0.22      47      92 ..     510     556 ..     495     569 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.94
  Rad9_Rad53_bind  74 yvvrglekkisadekv.ircirGy 96 
                       +vr+lek++s+ ++  ++ + G+
       KHJ33696.1 443 SEVRALEKRVSELKALeVKTLEGH 466
                      578999999887554347777776 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 2.4e-05
  Rad9_Rad53_bind  47 ga.vevkkedvkyLdlriGdkvkvdmktyvvrglekkisadekvirc 92 
                       +  ++k +dvk Ld+++ +    + k  +v++l++k s+++  ++ 
       KHJ33696.1 510 EKdPDIKASDVKVLDIKVSEVKAPELKVSEVKALDEKTSEEKMLVKW 556
                      44389*************987777779************99988775 PP

>> GIT_CC  GIT coiled-coil Rho guanine nucleotide exchange factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   4.5   2.7e-05      0.24      20      52 ..     794     827 ..     792     838 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.7e-05
      GIT_CC  20 elKkalaaseakiqqLlkvNtslsdelrl.LQsk 52 
                 e+Kk ++ s++  qqL+k  ++++++l+  LQ++
  KHJ33696.1 794 EVKKRVSSSNSNPQQLQKNQQNQEQQLQDvLQES 827
                 9*************************98437765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (857 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1603  (0.0894082); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.32s 00:00:01.07 Elapsed: 00:00:00.48
# Mc/sec: 5397.01
//
Query:       KHJ33697.1  [L=357]
Description: putative hsc70 cochaperone [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.4e-21   73.5   0.2    2.6e-20   71.9   0.2    1.9  1  SGTA_dimer   Homodimerisation domain of SGTA
    1.3e-17   62.8   2.1    2.3e-05   24.0   0.1    3.3  3  TPR_1        Tetratricopeptide repeat
    3.5e-17   61.1   1.2    0.00022   21.1   0.0    3.4  3  TPR_2        Tetratricopeptide repeat
    3.4e-14   52.2   1.0    4.4e-07   29.5   0.1    3.5  3  TPR_11       TPR repeat
    4.9e-12   45.1   4.6     0.0018   18.4   0.2    3.7  3  TPR_8        Tetratricopeptide repeat
    4.6e-08   32.9   0.2     0.0028   17.9   0.1    3.2  2  TPR_17       Tetratricopeptide repeat
    2.1e-06   28.3   0.0     0.0073   16.9   0.5    2.3  2  TPR_16       Tetratricopeptide repeat
    8.2e-06   25.5   0.3       0.18   11.9   0.0    3.4  3  TPR_7        Tetratricopeptide repeat
    2.7e-05   24.6   0.0       0.78   10.7   0.0    3.6  3  TPR_14       Tetratricopeptide repeat
    2.9e-05   24.5   0.0     0.0035   17.8   0.0    2.5  2  TPR_19       Tetratricopeptide repeat
    4.2e-05   23.8   0.4      0.017   15.4   0.1    2.8  2  TPR_12       Tetratricopeptide repeat
    0.00039   20.3   3.3     0.0022   17.9   1.5    2.4  2  STI1         STI1 domain
     0.0011   18.8   0.0        1.3    9.0   0.0    3.4  3  TPR_10       Tetratricopeptide repeat
  ------ inclusion threshold ------
       0.01   15.5   0.2      0.025   14.3   0.2    1.7  1  XPC-binding  XPC-binding domain
      0.032   14.9   2.6          2    9.2   0.1    2.9  2  TPR_6        Tetratricopeptide repeat
      0.039   14.2   0.2      0.063   13.5   0.2    1.4  1  ANAPC3       Anaphase-promoting complex, cyclosome, subunit 3
      0.052   13.6   5.3       0.15   12.2   0.8    2.9  2  MIT          MIT (microtubule interacting and transport) doma
       0.11   12.0   2.0       0.31   10.6   0.0    2.6  3  SHNi-TPR     SHNi-TPR
       0.13   12.4   0.0        0.3   11.3   0.0    1.6  1  TPR_9        Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> SGTA_dimer  Homodimerisation domain of SGTA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.9   0.2   2.8e-23   2.6e-20       2      66 ..       5      64 ..       4      65 .. 0.92

  Alignments for each domain:
  == domain 1  score: 71.9 bits;  conditional E-value: 2.8e-23
  SGTA_dimer  2 kkrlalaIidFLstslkdgtvseDdaESleVAiqCIaeaFevdkedkaavkkakfggqsLleile 66
                k+rlal++idFL+tsl+dgt++ Dd++S+e+Ai+CI++ ++vd+++++ +     g++sLlei++
  KHJ33697.1  5 KQRLALSVIDFLNTSLSDGTLKGDDRDSVEIAINCISDIYNVDPAQEKVE-----GQRSLLEIYS 64
                79******************************************665544.....79******97 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.1   2.4e-08   2.3e-05       4      34 .]     111     141 ..     108     141 .. 0.93
   2 !   15.2   0.0   1.5e-05     0.014       4      34 .]     145     175 ..     142     175 .. 0.95
   3 !   21.9   0.1   1.1e-07   0.00011       2      29 ..     177     204 ..     176     208 .. 0.93

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 2.4e-08
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALelnPnn 34 
                 ++  Gna + +++y  A+e y kALe+ P+n
  KHJ33697.1 111 YKSQGNASMAKKNYTTAIELYTKALEIIPKN 141
                 8899*************************97 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALelnPnn 34 
                 l n+++ay   ++y+ A  + e A+e++P++
  KHJ33697.1 145 LSNRAAAYSASKDYKSACVDAETAVEIDPSY 175
                 89***************************97 PP

  == domain 3  score: 21.9 bits;  conditional E-value: 1.1e-07
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALe 29 
                 ka+ +lG+a f lg+y+   e+yek ++
  KHJ33697.1 177 KAWSRLGLARFALGDYKGSMEAYEKGIK 204
                 7************************998 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   2.3e-07   0.00022       2      34 .]     109     141 ..     108     141 .. 0.92
   2 !   16.5   0.0   7.1e-06    0.0067       2      33 ..     143     174 ..     142     175 .. 0.93
   3 !   20.9   0.1   2.8e-07   0.00026       2      31 ..     177     206 ..     176     208 .. 0.93

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 2.3e-07
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                 e +  +G+a +++++y  A+e++ kAle+ P+n
  KHJ33697.1 109 EDYKSQGNASMAKKNYTTAIELYTKALEIIPKN 141
                 667889************************987 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 7.1e-06
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPn 33 
                   l n++ ay +++dy+ A  + e A+e+dP 
  KHJ33697.1 143 IFLSNRAAAYSASKDYKSACVDAETAVEIDPS 174
                 5799***************************7 PP

  == domain 3  score: 20.9 bits;  conditional E-value: 2.8e-07
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleld 31 
                 +a+ +lGla ++lgdy+   ea+ek ++++
  KHJ33697.1 177 KAWSRLGLARFALGDYKGSMEAYEKGIKYE 206
                 69************************9986 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.1   4.6e-10   4.4e-07       1      39 [.     115     153 ..     115     156 .. 0.96
   2 !   14.4   0.0   2.4e-05     0.023      18      42 .]     166     190 ..     154     190 .. 0.90
   3 !   12.4   0.1    0.0001     0.094       1      23 [.     183     205 ..     183     208 .. 0.93

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 4.6e-10
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 G+a +++ +y+ Aie Y kAl++ P+n+ +++n+++ay 
  KHJ33697.1 115 GNASMAKKNYTTAIELYTKALEIIPKNPIFLSNRAAAYS 153
                 9999*********************************95 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 2.4e-05
      TPR_11  18 kkAlkldPdnaeayynLGlayykqG 42 
                 ++A+++dP++  a++ LGla +++G
  KHJ33697.1 166 ETAVEIDPSYTKAWSRLGLARFALG 190
                 68*******************9998 PP

  == domain 3  score: 12.4 bits;  conditional E-value: 0.0001
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkl 23 
                 G a +++G+y++++eaY+k +k+
  KHJ33697.1 183 GLARFALGDYKGSMEAYEKGIKY 205
                 8899****************997 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1     2e-05     0.019       8      34 .]     115     141 ..     113     141 .. 0.92
   2 !   11.6   0.1   0.00027      0.25       6      33 ..     147     174 ..     144     175 .. 0.92
   3 !   18.4   0.2   1.9e-06    0.0018       2      31 ..     177     206 ..     176     208 .. 0.93

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2e-05
                 HHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   8 gsiylklgdyeeAkeyyekaleldpdn 34 
                 g++ + +++y  A+e y kale+ p+n
  KHJ33697.1 115 GNASMAKKNYTTAIELYTKALEIIPKN 141
                 788899******************996 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00027
                 HHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyyekaleldpd 33 
                 n + +y+  +dy++A    e a+e+dp+
  KHJ33697.1 147 NRAAAYSASKDYKSACVDAETAVEIDPS 174
                 77889**********************7 PP

  == domain 3  score: 18.4 bits;  conditional E-value: 1.9e-06
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleld 31 
                 +a+ +lg++ + lgdy+ ++e+yek ++++
  KHJ33697.1 177 KAWSRLGLARFALGDYKGSMEAYEKGIKYE 206
                 79*************************986 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   2.9e-06    0.0028       1      32 [.     130     161 ..     130     162 .. 0.95
   2 !   11.4   0.0   0.00037      0.35       3      30 ..     166     193 ..     164     200 .. 0.90

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 2.9e-06
      TPR_17   1 lylkaleldPnnadaynnLAelllknGdlmtA 32 
                 ly+kale+ P+n+ ++ n+A +++  +d++ A
  KHJ33697.1 130 LYTKALEIIPKNPIFLSNRAAAYSASKDYKSA 161
                 7***************************9977 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00037
      TPR_17   3 lkaleldPnnadaynnLAelllknGdlm 30 
                 + a+e+dP++ +a+  L+ +   +Gd++
  KHJ33697.1 166 ETAVEIDPSYTKAWSRLGLARFALGDYK 193
                 789**********************986 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0    0.0001     0.098       3      65 ..     114     173 ..     112     175 .. 0.85
   2 !   16.9   0.5   7.8e-06    0.0073       3      59 ..     148     201 ..     146     209 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 0.0001
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa.alyraalraap 65 
                 +++a ++ ++y+ A+++++ al+     P ++ +l +++ a+ + ++++ A  ++   a++ +p
  KHJ33697.1 114 QGNASMAKKNYTTAIELYTKALEII---PKNPIFLSNRAAAYSASKDYKSACvDAE-TAVEIDP 173
                 788889999****************...*********************9984444.4446666 PP

  == domain 2  score: 16.9 bits;  conditional E-value: 7.8e-06
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyra 59 
                 +a a+ +++dy  A   +e+a++ d   P    A+  lg+a++++g++++  ++y++
  KHJ33697.1 148 RAAAYSASKDYKSACVDAETAVEID---PSYTKAWSRLGLARFALGDYKGSMEAYEK 201
                 677888899999999999*******...************************99986 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0    0.0017       1.6      13      28 ..     122     137 ..     111     142 .. 0.80
   2 ?   -0.0   0.1       1.2   1.2e+03       2      18 ..     145     161 ..     145     162 .. 0.89
   3 !   11.9   0.0   0.00019      0.18       1      31 [.     178     206 ..     178     210 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0017
       TPR_7  13 GdyeeAielyeqsLal 28 
                  +y +Aiely+++L++
  KHJ33697.1 122 KNYTTAIELYTKALEI 137
                 58**********7765 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 1.2
       TPR_7   2 LlnLarlysrlGdyeeA 18 
                 L+n a +ys+  dy+ A
  KHJ33697.1 145 LSNRAAAYSASKDYKSA 161
                 7899**********987 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 0.00019
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltkd 31 
                 a+++L+ ++++lGdy+   e ye+  ++ ++
  KHJ33697.1 178 AWSRLGLARFALGDYKGSMEAYEK--GIKYE 206
                 7899********************..98876 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0     0.017        16       7      35 ..     114     142 ..     108     146 .. 0.84
   2 !    8.5   0.1    0.0043       4.1       7      42 ..     148     183 ..     142     185 .. 0.93
   3 !   10.7   0.0   0.00083      0.78       2      29 ..     177     204 ..     176     210 .. 0.93

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.017
      TPR_14   7 laeallalGdpdeAiallrralalaPdda 35 
                  + a +a  ++ +Ai+l+ +al+  P+++
  KHJ33697.1 114 QGNASMAKKNYTTAIELYTKALEIIPKNP 142
                 567778999**************999986 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0043
      TPR_14   7 laeallalGdpdeAiallrralalaPddaeawllla 42 
                 +a+a+ a+ d++ A   ++ a++ +P+   aw +l+
  KHJ33697.1 148 RAAAYSASKDYKSACVDAETAVEIDPSYTKAWSRLG 183
                 799*****************************9887 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 0.00083
      TPR_14   2 eallalaeallalGdpdeAiallrrala 29 
                 +a+ +l+ a +alGd++++++++++ ++
  KHJ33697.1 177 KAWSRLGLARFALGDYKGSMEAYEKGIK 204
                 59**********************9886 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   3.7e-06    0.0035       2      44 ..     119     161 ..     118     163 .. 0.96
   2 !    7.2   0.0    0.0079       7.4       4      50 ..     155     201 ..     154     213 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 3.7e-06
      TPR_19   2 laegdyaeAlalleqalqedpknaearllLAeallalgqldeA 44 
                 +a ++y+ A++l+++al+  pkn+  + + A a+ a+++++ A
  KHJ33697.1 119 MAKKNYTTAIELYTKALEIIPKNPIFLSNRAAAYSASKDYKSA 161
                 67899***********************************988 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0079
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealLda 50 
                 ++dy +A    e a + dp +  a+ +L  a +alg+++  +++ ++
  KHJ33697.1 155 SKDYKSACVDAETAVEIDPSYTKAWSRLGLARFALGDYKGSMEAYEK 201
                 6789999999999************************9987776665 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   1.8e-05     0.017      10      64 ..     115     161 ..     108     174 .. 0.83
   2 ?    4.7   0.0      0.04        38       5      28 ..     178     201 ..     174     204 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.8e-05
      TPR_12  10 aavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeA 64 
                 +++ ++ ++y+ A+el+ kalei+     p++p     l n + +y+a+++y+ A
  KHJ33697.1 115 GNASMAKKNYTTAIELYTKALEII-----PKNPI---FLSNRAAAYSASKDYKSA 161
                 7777899*****************.....99866...9**************999 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.04
      TPR_12   5 alnnlaavlrrlgrydeAlellek 28 
                 a+++l+++ ++lg+y  + e +ek
  KHJ33697.1 178 AWSRLGLARFALGDYKGSMEAYEK 201
                 677788888888888877777775 PP

>> STI1  STI1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   1.5   2.3e-06    0.0022      15      51 ..     278     314 ..     276     315 .. 0.93
   2 ?    1.4   0.0      0.34   3.2e+02      13      23 ..     330     340 ..     327     347 .. 0.57

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 2.3e-06
        STI1  15 rellsDPefvakleeiqsNPqalqqymsDprimtvls 51 
                  + ++ P f ++ + ++sNP  l++ m++pr+ ++l+
  KHJ33697.1 278 NAVMNSPMFAKMSKNLMSNPGLLSNLMNNPRVAEMLG 314
                 578999**************************99987 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.34
        STI1  13 etrellsDPef 23 
                 +++ l++DP  
  KHJ33697.1 330 DLSSLMKDPNI 340
                 44555555543 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.068        64      12      37 ..     111     136 ..     108     142 .. 0.72
   2 !    9.0   0.0    0.0014       1.3       5      31 ..     145     171 ..     144     171 .. 0.95
   3 ?    1.9   0.0      0.24   2.3e+02       8      28 ..     182     202 ..     180     204 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.068
      TPR_10  12 lrqrgrydeAealleealairrrllG 37 
                 + ++g+   A + +  a++++ ++l+
  KHJ33697.1 111 YKSQGNASMAKKNYTTAIELYTKALE 136
                 77777777777788888888877776 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0014
      TPR_10   5 lnNLanalrqrgrydeAealleealai 31 
                 l+N a+a+++ ++y+ A  ++e a++i
  KHJ33697.1 145 LSNRAAAYSASKDYKSACVDAETAVEI 171
                 799*********************997 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.24
      TPR_10   8 LanalrqrgrydeAealleea 28 
                 L+ a +++g+y+++++ +e+ 
  KHJ33697.1 182 LGLARFALGDYKGSMEAYEKG 202
                 899999************985 PP

>> XPC-binding  XPC-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.2   2.7e-05     0.025       1      46 [.     277     317 ..     277     319 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.7e-05
  XPC-binding   1 LefLrnnpqFqqlRqlvqqnPqlLqplLqqlaqsnPqllqlIqqnq 46 
                  L++ +n+p+F+++ + + +nP lL+ l++     nP++++++ q+ 
   KHJ33697.1 277 LNAVMNSPMFAKMSKNLMSNPGLLSNLMN-----NPRVAEMLGQHG 317
                  67889**********************95.....899999988885 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1     0.055        52      10      26 ..     111     134 ..     106     140 .. 0.54
   2 ?    9.2   0.1    0.0022         2       5      25 ..     181     201 ..     177     204 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.055
                 HHHH.......HHHHHHHHHHHHH CS
       TPR_6  10 yrkl.......gdtdkAlealerl 26 
                 y+++       +++++A+e++ + 
  KHJ33697.1 111 YKSQgnasmakKNYTTAIELYTKA 134
                 555522222324666666666665 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0022
                 HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrklgdtdkAlealer 25 
                 +l+l++++lgd+  ++ea+e+
  KHJ33697.1 181 RLGLARFALGDYKGSMEAYEK 201
                 89******9**********97 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.2   6.7e-05     0.063       2      80 ..     121     200 ..     120     202 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 6.7e-05
                 TT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHHHHHTT-HHHHHHHH- CS
      ANAPC3   2 qnnyknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqcllkLkkyeeAiaaLe 80 
                 ++ny +Ai l+ ++l+  +++p  +   A ++  +++yk+A+  +++a +++++  +++  ++ + ++L+ y+    a+e
  KHJ33697.1 121 KKNYTTAIELYTKALEIIPKNPIFLSNRAAAYSASKDYKSACVDAETAvEIDPSYTKAWSRLGLARFALGDYKGSMEAYE 200
                 78*************9999999888889********************99999999***999999999999997777666 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.8   0.00016      0.15      17      33 ..     121     137 ..     103     160 .. 0.77
   2 ?    2.3   0.2      0.19   1.8e+02      18      33 ..     190     205 ..     188     208 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00016
         MIT  17 agnyeeAlelYkealel 33 
                 ++ny +A+elY++ale+
  KHJ33697.1 121 KKNYTTAIELYTKALEI 137
                 67778888888887775 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.19
         MIT  18 gnyeeAlelYkealel 33 
                 g+y+  +e+Y++++++
  KHJ33697.1 190 GDYKGSMEAYEKGIKY 205
                 89************97 PP

>> SHNi-TPR  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00032      0.31       4      30 ..     111     137 ..     108     138 .. 0.92
   2 ?   -0.4   0.1      0.88   8.3e+02      20      27 ..     154     161 ..     153     171 .. 0.72
   3 ?   -2.2   0.1       3.1     3e+03      11      25 ..     230     244 ..     230     245 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00032
    SHNi-TPR   4 ydlLGEislEnenFpqAveDlrkaLeL 30 
                 y  +G+ s+   n+++A+e ++kaLe+
  KHJ33697.1 111 YKSQGNASMAKKNYTTAIELYTKALEI 137
                 78899********************98 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.88
    SHNi-TPR  20 AveDlrka 27 
                 A++D+++a
  KHJ33697.1 154 ASKDYKSA 161
                 67777776 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 3.1
    SHNi-TPR  11 slEnenFpqAveDlr 25 
                 s+E+ n +q ++D++
  KHJ33697.1 230 SIESRNKDQSSSDYD 244
                 678888899****97 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00031       0.3       3      53 ..     150     200 ..     145     209 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00031
       TPR_9   3 aiaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLe 53 
                 a++  ++d+  a   +e  + ++P     +   Gl+++ lG++++ +++ e
  KHJ33697.1 150 AAYSASKDYKSACVDAETAVEIDPSYTKAWSRLGLARFALGDYKGSMEAYE 200
                 5789999**************************************999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       898  (0.0500865); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2585.50
//
Query:       KHJ33698.1  [L=237]
Description: putative upf0326 protein hag1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.9e-30  104.7   0.0    5.1e-30  104.3   0.0    1.1  1  Peptidase_C97  PPPDE putative peptidase domain
     0.0022   18.3   0.0     0.0046   17.3   0.0    1.5  1  LRAT           Lecithin retinol acyltransferase
  ------ inclusion threshold ------
      0.023   15.1   0.0      0.042   14.2   0.0    1.4  1  DUF778         Protein of unknown function (DUF778)


Domain annotation for each model (and alignments):
>> Peptidase_C97  PPPDE putative peptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.3   0.0   8.6e-34   5.1e-30       2     149 ..      25     164 ..      24     166 .. 0.93

  Alignments for each domain:
  == domain 1  score: 104.3 bits;  conditional E-value: 8.6e-34
                    EEEEEEEETT...TTHHHHHHHHHHSS-----EEEEEEETTEEEE--T......T-SEEESTT-STT-.S-SEEEEEEEE---HHHHHHHHHHHHT CS
  Peptidase_C97   2 kvelivyDlsldkkglarrvyptllGkkieGiyhtgvevygleyafggkekee.gGifelkpgttsegakpresieigeTevteeevraileelss 96 
                    k+++++yDl ++ k    + +++ +G    +  h+gv+++++eya+gg++ +  +Gi+ ++p+t  +g ++r++i +g T  +  e+++i++e s+
     KHJ33698.1  25 KIAINIYDLLPPGK---LSSILWACGS---ALLHSGVVINDREYAYGGHDSKGvTGIYYTPPRTVPPGGNFRCEILHGFTFQSLVEIDSIIKEASE 114
                    689*******6655...67788999*7...*******************99999****************************************** PP

                    T--GGG-BTTTB-HHHHHHHHHHHHHS----HHHHTHHHHHHTSHHHHHHTTT CS
  Peptidase_C97  97 eytgdkYnLiskNCnhFtdelvdfLtgkkiPewinrlarivlstptvklllpm 149
                     ++g++Yn+++ NCnhFt  l+++Lt+++ P+w+nr a+i+l+   + +++p+
     KHJ33698.1 115 VFQGTSYNILTMNCNHFTSFLLEKLTNRPGPSWLNRAASIGLA---LPCVVPK 164
                    ******************************************4...4556665 PP

>> LRAT  Lecithin retinol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   7.7e-07    0.0046      89     120 ..     103     134 ..      69     138 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 7.7e-07
                 --HHHHHHHHHHHTT-E-SCGHHCHHHHHHHH CS
        LRAT  89 lpneeviqrAeelvGeveYsllsnNCEhFvty 120
                  + +++i++A e    ++Y++l+ NC hF + 
  KHJ33698.1 103 VEIDSIIKEASEVFQGTSYNILTMNCNHFTSF 134
                 56799*******9999*************875 PP

>> DUF778  Protein of unknown function (DUF778)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0     7e-06     0.042     136     170 ..     109     143 ..     101     155 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 7e-06
      DUF778 136 lsssseefqgeeynLltanchsfvalaLnklryed 170
                 ++++se fqg++yn+lt nc  f +  L+kl+ + 
  KHJ33698.1 109 IKEASEVFQGTSYNILTMNCNHFTSFLLEKLTNRP 143
                 56788999********************9998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1721.10
//
Query:       KHJ33699.1  [L=651]
Description: hypothetical protein EV44_g6391 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (651 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       838  (0.0467399); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4542.31
//
Query:       KHJ33700.1  [L=761]
Description: putative abc transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-32  113.2   0.0    5.6e-32  111.1   0.0    2.0  2  ABC_tran      ABC transporter
    1.6e-19   70.6   9.9    1.6e-19   70.6   9.9    1.9  2  ABC_membrane  ABC transporter transmembrane region
    2.9e-05   23.6   0.5    0.00058   19.4   0.0    2.1  2  SMC_N         RecF/RecN/SMC N terminal domain
    0.00035   20.5   0.1     0.0018   18.2   0.0    2.1  2  RsgA_GTPase   RsgA GTPase
    0.00057   19.7   0.8     0.0021   17.8   0.0    2.3  3  AAA_15        AAA ATPase domain
  ------ inclusion threshold ------
      0.031   14.8   0.5      0.085   13.3   0.5    1.8  1  AAA_23        AAA domain
      0.033   14.4   0.1       0.63   10.3   0.1    2.4  1  SbcCD_C       Putative exonuclease SbcCD, C subunit
      0.036   13.4   0.1      0.068   12.4   0.1    1.3  1  Zeta_toxin    Zeta toxin
      0.052   13.8   0.6       0.46   10.7   0.3    2.7  2  AAA_22        AAA domain
       0.06   13.1   3.3       0.13   12.1   0.2    2.6  3  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
      0.094   12.5   0.9       0.23   11.2   0.3    2.0  2  AAA_29        P-loop containing region of AAA domain
       0.11   12.2   0.1       0.25   11.0   0.1    1.5  1  AAA_30        AAA domain


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0       1.5   2.2e+03      40     119 ..     350     430 ..     335     435 .. 0.61
   2 !  111.1   0.0   3.8e-35   5.6e-32       1     137 []     527     676 ..     527     676 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 1.5
                 EEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH...HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  40 Geilldgkdlkeqeleslrkeigvlpqepqlfpeltvren...esdeeiekalsklglkelkdtvvksspssLSgGqkqrval 119
                  +++   ++ +++ ++ +rk+i + ++   ++++ ++ +    e+++ ++++ ++l+ k++ ++   s    LS+G    + l
  KHJ33700.1 350 TKLHAHRAKKRRNFITMFRKQINIGEESLDFWSTASLFNMilyEKSRYVNAVKEHLESKNKYENS--SYLVDLSQGLIMALNL 430
                 44444444444455566666666666666666666555558877888899999999988844333..3558888887666666 PP

  == domain 2  score: 111.1 bits;  conditional E-value: 3.8e-35
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH.............HHHTC.. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............xxxxx.. RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren.............esdee.. 84 
                 lkn+s+    g++va+vGe+G GKSt+lkl+ + ++ ++G+i +dg+d+++ +++slr++ig++pq+p lf+++ + +n                 e  
  KHJ33700.1 527 LKNISFAAPSGKTVALVGETGGGKSTILKLIDRFYDVKAGSISIDGQDIRNVTTSSLRESIGFVPQDPILFNDT-IMNNiryaklsatneevF---Eac 621
                 79************************************************************************.788889998885544441...033 PP

                 .HHHHHHH.STTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 .xxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  85 .iekalsk.lglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                  ++++++k l+ ++  +++v++++ +LSgG+kqr+a+ar++lk+p+++llDE+t+
  KHJ33700.1 622 kASAIHEKiLNFPDGYESKVGDRGIKLSGGEKQRIAIARVILKRPEVILLDEATS 676
                 333333321333445689999999*****************************96 PP

>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   1.3       1.1   1.7e+03      29      66 ..      58      92 ..      40      98 .. 0.70
   2 !   70.6   9.9   1.1e-22   1.6e-19       3     274 .]     191     465 ..     189     465 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.1
                  HHSSTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ABC_membrane 29 lldkgdpetealnvysllllllglaqfilallqsylln 66
                  l+ ++dp++   +++sl+  ++ +++f++ +l++y+l 
    KHJ33700.1 58 LIYYSDPQF---SMVSLIEQFIRILSFLILFLYNYYLK 92
                  554455555...77777777888888888888888875 PP

  == domain 2  score: 70.6 bits;  conditional E-value: 1.1e-22
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHH.HHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTHHHHHHSC CS
  ABC_membrane   3 liillailagvlsplfplvlgrildtlldkgdpet.ealnvysllllllglaq..filallqsyllnvtgerlskrlrrklfkkilrqpmsffdtns 96 
                   l++++++ + +l++l+p  +g ++d+l+++++ +   ++ + ++++++l +a+  + ++ll+ +l+n + ++   +l +    ++++++  f+d++ 
    KHJ33700.1 191 LVVFCLMGSSALNILVPRQMGTMIDSLTKYAQGDHtYNIWLPLITYTALRFANggSGISLLRKWLWNPIEQHSYGALTTASHSHLMNLSSDFHDSKI 287
                   789**************************9665553255555555666555541156789************************************* PP

                   HHHHHHHHHHHHHHHHHHHCHHHHHHHH.HHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH CS
  ABC_membrane  97 vGellsrltndvsklrdglgeklglffq.slltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgirt 192
                   +++l++ +    ++++ +l   +++++  s+ + ++++ ++  +g+++ l+l+++++l+i+ s  +  +  k +++  +   k  ++ eEsl  + t
    KHJ33700.1 288 TSDLIQAIF-GGRSISLLLEAVFFQIIPmSIDLSLAICYLSSQFGPYMGLILMITIVLYIYTSTKLHAHRAKKRRNFITMFRKQINIGEESLDFWST 383
                   ********7.445577777777777775144455677889999****************************************************** PP

                   HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHHH CS
  ABC_membrane 193 VkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfailfgal 274
                     +f++  y+ +++ +a++e++++  k+ +++ l+   + l++ l  + +l+fG+++v  +  ++g+++++l+++a+l+g++
    KHJ33700.1 384 ASLFNMILYEKSRYVNAVKEHLESKNKYENSSYLVDLSQGLIMALNLLSVLCFGFYQVTYNGKTIGQFTTLLVYWAQLSGPM 465
                   ********************************************************************************97 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.1     0.083   1.2e+02      25      43 ..     538     556 ..     525     561 .. 0.82
   2 !   19.4   0.0   3.9e-07   0.00058     111     213 ..     568     720 ..     558     725 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.083
                 SEEEEEESTTSSHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxx RF
       SMC_N  25 sftaivGpNGSGKsnlldA 43 
                 +  a+vG+ G GKs +l  
  KHJ33700.1 538 KTVALVGETGGGKSTILKL 556
                 57799**********9875 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 3.9e-07
                 EEETTEEE-HHHHHHHHHCTT-STT......................................................CS-HHHHHHHHHHHHHHHHC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx......................................................xxxxxxxxxxxxxxxxxxxx RF
       SMC_N 111 ykingkevtkkevsellesagiske......................................................lLSgGektLvalaLlfAiqk 155
                 + i+g+++++   s+l es g+ ++                                                       LSgGek+ +a+a +     
  KHJ33700.1 568 ISIDGQDIRNVTTSSLRESIGFVPQdpilfndtimnniryaklsatneevfeackasaihekilnfpdgyeskvgdrgiKLSGGEKQRIAIARV----I 662
                 66777777777777777777777777777777777888888888888888888888888888999999999999999999********999987....3 PP

                 CS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 156 vkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklvgvtk 213
                  k+  + llDe  +  D +  k + + l++  k+   +++++r  ++ +ad ++ v+ 
  KHJ33700.1 663 LKRPEVILLDEATSSVDTETEKTIHKSLNKIFKDRTTLIVAHRLSTIMDADYIYVVMN 720
                 45555789*******************************************9998865 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       3.5   5.2e+03     114     150 ..     385     421 ..     384     426 .. 0.72
   2 !   18.2   0.0   1.2e-06    0.0018      85     143 ..     522     581 ..     512     587 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 3.5
                  HHHHHHCTT-----S--------------SEEEEEET CS
  RsgA_GTPase 114 tLinallpelelktgevseklgrGkhTTtavellela 150
                  +L n++l e++  +++v+e+l++      ++ l++l+
   KHJ33700.1 385 SLFNMILYEKSRYVNAVKEHLESKNKYENSSYLVDLS 421
                  8999999999999999999987655555555555555 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 1.2e-06
                  TTHTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S--------------S CS
  RsgA_GTPase  85 ktkegleelkellkd.ktsvlvGqSGvGKStLinallpelelktgevseklgrGkhTTta 143
                  ++k++l++++ +  + kt++lvG++G GKSt+++ ++   ++k g++s + +  ++ Tt+
   KHJ33700.1 522 TRKDTLKNISFAAPSgKTVALVGETGGGKSTILKLIDRFYDVKAGSISIDGQDIRNVTTS 581
                  5567788888777666********************************998888888776 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.4       1.9   2.9e+03     147     174 ..     124     151 ..      77     173 .. 0.48
   2 ?   -3.6   0.2       4.5   6.8e+03     178     197 ..     399     418 ..     345     422 .. 0.52
   3 !   17.8   0.0   1.4e-06    0.0021      25     174 ..     539     744 ..     527     758 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.9
      AAA_15 147 lpkekeeklekekeelkidkedlkklik 174
                 ++++ ++k +++k el  + ++ ++ i+
  KHJ33700.1 124 DYDLDTNKGNLNKSELLEKEDKSNDSIS 151
                 2222223333333333222222222222 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 4.5
      AAA_15 178 eslkkee...elknvlksaiikl 197
                 + +   +   e kn+++++++++
  KHJ33700.1 399 NAV---KehlESKNKYENSSYLV 418
                 122...13335555555555555 PP

  == domain 3  score: 17.8 bits;  conditional E-value: 1.4e-06
      AAA_15  25 ltvliGkNnsGKSsilealdlFlnnkekknkkvikiekedleifeniseskdikIdvef........................................ 83 
                 +  l+G+ + GKS+il+++d F + k       i i+ +d+++   +  s +  I +                                          
  KHJ33700.1 539 TVALVGETGGGKSTILKLIDRFYDVK----AGSISIDGQDIRNV--TTSSLRESIGFVPqdpilfndtimnniryaklsatneevfeackasaihekil 631
                 678*********************99....77778888888777..44444444444444477777777777777777777777777777777777888 PP

      AAA_15  84 ................................aekekakeyektlkskekkkadlllkkkesdlkktikdkklklkknelsdekisvekkkskkelpke 150
                                                 +       ++ +l++  +  ++   k + ++l k++kd+++ +        + s  ++ ++ +   +
  KHJ33700.1 632 nfpdgyeskvgdrgiklsggekqriaiarvilK-----RPEVILLDEATSSVDTETEKTIHKSLNKIFKDRTTLIV-----AHRLSTIMDADYIYVVMN 720
                 888888888888888888877776664443221.....22233333333444444445556666777777777765.....666666777777777777 PP

      AAA_15 151 keeklekekeelkidkedlkklik 174
                  e  ++  +++l +++ + kkl++
  KHJ33700.1 721 GEIIEKGTHKDLILENGKYKKLWS 744
                 777777777777777777777777 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.5   5.7e-05     0.085      14      39 ..     529     557 ..     516     705 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 5.7e-05
      AAA_23  14 eidF...skgltlItGpNGaGKTTildAi 39 
                 +i F   s + ++++G++G GK+Til  i
  KHJ33700.1 529 NISFaapSGKTVALVGETGGGKSTILKLI 557
                 688888888999**************877 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.1   0.00042      0.63      20      87 ..     635     689 ..     627     692 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00042
     SbcCD_C  20 dgkekelsrssgtlSGGekqflaylalaaalaalyssaegrepalrlvfLDEAFsklDeesiatllel 87 
                 dg e+++ ++  +lSGGekq +       a+a ++ +      ++++++LDEA s++D e+ +t+ + 
  KHJ33700.1 635 DGYESKVGDRGIKLSGGEKQRI-------AIARVILK------RPEVILLDEATSSVDTETEKTIHKS 689
                 5666666666777777777543.......33333333......689*************998887665 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   4.5e-05     0.068      15      57 ..     536     578 ..     523     582 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.5e-05
  Zeta_toxin  15 rPklillgGqpGAGKselaellkdelerqgnvvrldpDdlRel 57 
                 + k + l+G +G GKs++++l+++  + + + + +d+ d+R+ 
  KHJ33700.1 536 SGKTVALVGETGGGKSTILKLIDRFYDVKAGSISIDGQDIRNV 578
                 4578999*********************************985 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       4.1   6.1e+03      52      80 ..     113     141 ..      94     143 .. 0.82
   2 ?   10.7   0.3   0.00031      0.46       7      38 ..     539     591 ..     535     705 .. 0.61

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 4.1
      AAA_22  52 sskdllrellralglelkaerlsseelle 80 
                 +++++ +e++++++l++++ +l+++elle
  KHJ33700.1 113 GPESISSEIFSDYDLDTNKGNLNKSELLE 141
                 67889999******999998888888874 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00031
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaee.....................e 38 
                  ++++Ge+G GK+t l+ + + +d  a                         +
  KHJ33700.1 539 TVALVGETGGGKSTILKLIDRFYDVKAGSISidgqdirnvttsslresigfvP 591
                 5789***************9999876655556665555555555554444440 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1       1.3     2e+03      72     120 ..     106     155 ..      83     168 .. 0.73
   2 ?   12.1   0.2   8.5e-05      0.13       3      41 ..     541     579 ..     540     607 .. 0.65
   3 ?    0.0   0.0       0.4     6e+02     165     219 ..     614     668 ..     594     707 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.3
      AAA_21  72 yryglrlersqv.eeklssvetllesgllldkrsleeedvfnpeargirg 120
                  + +++++ + + +e +s+++ +  +g l +++ le+ed++n+  +  ++
  KHJ33700.1 106 LSLSINVGPESIsSEIFSDYDLDTNKGNLNKSELLEKEDKSNDSISAYYD 155
                 56677777777777888888888888888888888888877776655554 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 8.5e-05
      AAA_21   3 vliGpNgsGKSnLLdaldllarl.......drdvegltdelsgggg 41 
                 +l+G  g GKS++L+++d + ++       d         + ++++
  KHJ33700.1 541 ALVGETGGGKSTILKLIDRFYDVkagsisiD-------GQDIRNVT 579
                 79******************99865444442.......22222222 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.4
      AAA_21 165 rigllnifadyfgfakekrllqrlvrslklveielsdlgegeeliasvderlrer 219
                 +  ++++ ++ +   k++++ +++++++ +++i+ls  +++   ia+v++  +e+
  KHJ33700.1 614 NEEVFEACKASAIHEKILNFPDGYESKVGDRGIKLSGGEKQRIAIARVILKRPEV 668
                 7778888888888899999999999999999999988877777777776665554 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.3   0.00015      0.23      21      39 ..     535     554 ..     525     558 .. 0.83
   2 ?   -2.7   0.0       3.5   5.2e+03      36      41 ..     707     712 ..     707     721 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00015
      AAA_29  21 lkg.atlltGpsGsGKSTll 39 
                 ++g ++ l+G++G GKST+l
  KHJ33700.1 535 PSGkTVALVGETGGGKSTIL 554
                 4667899***********98 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 3.5
      AAA_29  36 STllDA 41 
                 ST++DA
  KHJ33700.1 707 STIMDA 712
                 9****9 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   0.00017      0.25      16      68 ..     536     589 ..     528     701 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00017
      AAA_30  16 sgdrvavltGpAGtGKttalkalreaweaa.g.grviglAptgkaAkvLaeelgi 68 
                 sg ++++l+G  G GK+t+lk + + ++ + g  ++ g    +     L+e++g+
  KHJ33700.1 536 SG-KTVALVGETGGGKSTILKLIDRFYDVKaGsISIDGQDIRNVTTSSLRESIGF 589
                 44.5899******************999884444444555555566667777664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (761 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       762  (0.042501); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.69u 0.31s 00:00:01.00 Elapsed: 00:00:00.45
# Mc/sec: 5058.00
//
Query:       KHJ33701.1  [L=254]
Description: putative mitochondrial ribosomal protein subunit s18 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0026   18.2   0.0     0.0053   17.2   0.0    1.5  1  Ribosomal_S11  Ribosomal protein S11


Domain annotation for each model (and alignments):
>> Ribosomal_S11  Ribosomal protein S11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.9e-07    0.0053      26     110 .]     159     252 ..     152     252 .. 0.70

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2.9e-07
  Ribosomal_S11  26 vksaGglgvkasrkssPyaaqlaaekaaekvldkG....ikavevkvkgpGpGreaalralar.aG....lkigriedvtPiPhdgirrpkkrr 110
                    +  aG lg+k s +    +a +    ++ ++ + G    i+++ev ++g G+Grea  r l    G     ki ++ d t +   g+r+p+ rr
     KHJ33701.1 159 SLCAGRLGFKHSGRKHYDSAFQLGTYVMARMQESGmnsyIERLEVYLRGFGAGREAVTRVLLGvEGkylrNKIVKVADSTRLKIGGTRSPNPRR 252
                    5578999999886444444555555555555566611116789****************98531342222468899999999999999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1869.87
//
Query:       KHJ33702.1  [L=446]
Description: putative 26s protease regulatory subunit 6a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.5e-40  136.2   0.0    1.8e-39  135.2   0.0    1.6  1  AAA             ATPase family associated with various cellula
    1.4e-16   60.1   0.3      3e-16   59.1   0.3    1.6  1  Prot_ATP_ID_OB  Proteasomal ATPase OB C-terminal domain
    2.2e-07   30.5   0.0    4.5e-07   29.6   0.0    1.5  1  AAA_lid_3       AAA+ lid domain
     0.0001   22.7   1.5      0.018   15.4   0.0    2.8  3  AAA_16          AAA ATPase domain
    0.00033   20.7   0.5     0.0014   18.6   0.1    2.3  2  AAA_5           AAA domain (dynein-related subfamily)
    0.00036   20.3   0.0    0.00087   19.1   0.0    1.6  1  RuvB_N          Holliday junction DNA helicase RuvB P-loop do
     0.0011   19.1   0.1       0.01   16.0   0.0    2.5  2  AAA_2           AAA domain (Cdc48 subfamily)
     0.0024   17.3   0.3      0.077   12.4   0.1    2.4  2  PhoH            PhoH-like protein
     0.0073   16.6   5.1      0.077   13.3   0.0    3.4  4  AAA_22          AAA domain
     0.0086   15.5   0.0      0.019   14.3   0.0    1.5  1  Mg_chelatase    Magnesium chelatase, subunit ChlI
     0.0091   15.2   0.0      0.024   13.8   0.0    1.7  1  DUF815          Protein of unknown function (DUF815)
  ------ inclusion threshold ------
      0.014   15.5   0.0      0.032   14.4   0.0    1.7  1  AAA_33          AAA domain
        0.1   12.1   0.0        0.3   10.6   0.0    1.8  1  AAA_7           P-loop containing dynein motor region
       0.17   11.6   2.0       0.17   11.6   0.1    2.0  2  IstB_IS21       IstB-like ATP binding protein
        0.5   10.1   4.6        0.6    9.9   0.0    2.6  3  AAA_11          AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.2   0.0   1.5e-42   1.8e-39       2     132 .]     231     363 ..     230     363 .. 0.96

  Alignments for each domain:
  == domain 1  score: 135.2 bits;  conditional E-value: 1.5e-42
                 EEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH...TTCCCHHHHHHHHHHHHHHHHTT CS
         AAA   2 llyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgvk 97 
                 l+yGppGtGKTlla+a a +++++fl++ g++l+++++g+++k +r++f+ akeka p i+fiDE+da++++r   ++s ++e +r++ +Ll++ldg+ 
  KHJ33702.1 231 LMYGPPGTGKTLLARACAAQTDATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKA-PAIIFIDELDAVGTKRfdsEKSGDREVQRTMLELLNQLDGFA 328
                 89*****************************************************9.****************997777889999************** PP

                 TSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETTS CS
         AAA  98 kkeskvivigatnrpdkldpallr.gRfdrkieiel 132
                 ++ +++ v++atnr+d ldpallr gR+drkie++l
  KHJ33702.1 329 SD-DRIKVLAATNRIDVLDPALLRsGRLDRKIEFPL 363
                 *7.66****************************985 PP

>> Prot_ATP_ID_OB  Proteasomal ATPase OB C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.1   0.3   2.5e-19     3e-16       1      57 []      96     172 ..      96     172 .. 0.99

  Alignments for each domain:
  == domain 1  score: 59.1 bits;  conditional E-value: 2.5e-19
                     EEEEEEE-TT....................SSEEEEE-TTS-EEEEEE-GGGSSST--TTEEEEEETTTTEEEEEE- CS
  Prot_ATP_ID_OB   1 VatVsEvldd....................teraiVktssdeevvvslagavpremLrpgDlVavdkdtgfifEkLP 57 
                     V++V+E+ld                     +++a++kts++++++++l g v+ + L+pgDl++v+kd++++++ LP
      KHJ33702.1  96 VGNVVELLDLdptaesqeeganidldatrvGKSAVIKTSTRQTIFLPLIGVVDLTLLKPGDLIGVNKDSYLVLDTLP 172
                     9********9******************************************************************9 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.0   3.7e-10   4.5e-07       2      42 ..     386     426 ..     385     429 .. 0.92

  Alignments for each domain:
  == domain 1  score: 29.6 bits;  conditional E-value: 3.7e-10
   AAA_lid_3   2 vdlkeLAerTeGySGADlaalcreAallAlrrgikeitmed 42 
                 v++ eLA+ T+ + GA l+a+c eA++ Alr g  +i+ e+
  KHJ33702.1 386 VNWPELARSTDEFGGAQLKAVCVEAGMIALRMGKNKIGHEH 426
                 8999***************************9988888877 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1         5     6e+03      34      43 ..     124     133 ..     122     139 .. 0.77
   2 !   15.4   0.0   1.5e-05     0.018      20      49 ..     223     252 ..     214     274 .. 0.77
   3 ?    5.5   0.0     0.017        20     121     149 ..     273     305 ..     256     329 .. 0.70

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 5
      AAA_16  34 GvGKsslvre 43 
                  vGKs+++++
  KHJ33702.1 124 RVGKSAVIKT 133
                 69*****976 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 1.5e-05
      AAA_16  20 rsgrpelvllsGesGvGKsslvrellrale 49 
                     p   l +G++G+GK+ l+r+++ +  
  KHJ33702.1 223 GIKAPKGALMYGPPGTGKTLLARACAAQTD 252
                 556778899***************996433 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.017
      AAA_16 121 ellkrllallsrderplvlvlDdlq.....wade 149
                  l+++++al+++ + p ++++D+l+     ++d+
  KHJ33702.1 273 KLVRDCFALAKE-KAPAIIFIDELDavgtkRFDS 305
                 567788889998.778*********777774444 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1       6.4   7.7e+03      80     103 ..      45      61 ..      34      78 .. 0.50
   2 !   18.6   0.1   1.2e-06    0.0014       3     135 ..     231     350 ..     229     352 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 6.4
                 HHHHHHHHHHHSSEEE..-SSSEE CS
       AAA_5  80 evlnsLlslleerrllleeggelv 103
                   +n+  +lle++        + +
  KHJ33702.1  45 VDINTRRRLLENDS-------QIM 61 
                 44444444444443.......333 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 1.2e-06
                 EEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------G-SEEEEESGGG--HHHHHHHHHH.HHSSEEE..-SS CS
       AAA_5   3 lLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraaregeilvlDEveraesevlnsLlsl.leerrllleegg 100
                 l+ GppGtgK+ la+  aa + ++++  ++++      l++     +g +  +d  +  + + ++i+++DE++ + ++ ++s  s   e +r +le ++
  KHJ33702.1 231 LMYGPPGTGKTLLARACAAQTDATFLKLAGPQ------LVQMFI-GDGAKLVRDCFALAKEKAPAIIFIDELDAVGTKRFDSEKSGdREVQRTMLELLN 322
                 899********************999999998......776666.35555555555555555899*******999988888877651344555555566 PP

                 SEEE---......-EEEEEESS--.-TT-TTHHHH CS
       AAA_5 101 elvkaknddllerfrviatanpldrslnelspalr 135
                 +l ++++dd   r+ v+a++n+ d     l+pal+
  KHJ33702.1 323 QLDGFASDD---RIKVLAATNRID----VLDPALL 350
                 666666654...688899999888....7777776 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   7.2e-07   0.00087      36      94 ..     230     296 ..     214     302 .. 0.75

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 7.2e-07
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvklkitsgPvleka..gdlaalltn...l...eekdvlfideih 94 
                  l+yGpPG Gkt la+  a++ ++++   +gP l +   gd a l+ +   l   ++  ++fide+ 
  KHJ33702.1 230 ALMYGPPGTGKTLLARACAAQTDATFLKLAGPQLVQMfiGDGAKLVRDcfaLakeKAPAIIFIDELD 296
                 69******************************99774336666554331113111445688888875 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   8.6e-06      0.01       7     104 ..     231     322 ..     227     332 .. 0.81
   2 ?   -3.5   0.0       8.2   9.8e+03      22      45 ..     368     390 ..     366     411 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 8.6e-06
                 EEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS..EEEEETGGG-------------HHHHHHHHHHH CS
       AAA_2   7 lllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpkessgadvSregVqrdLLqil 103
                 l+ gp g+Gkt+la+a a   ++    ++  +   +l +      + +  +  ++    a+e+   i+++DE+d +  k+  ++     +Vqr +L +l
  KHJ33702.1 231 LMYGPPGTGKTLLARACAAQTDA----TFLKLAGPQLVQ----MFIGDGAKLVRDCFALAKEKApaIIFIDELDAVGTKRFDSEKSGDREVQRTMLELL 321
                 6889999*****99999999995....788777777777....66666666666666667777777************86666667778********99 PP

                 H CS
       AAA_2 104 e 104
                  
  KHJ33702.1 322 N 322
                 6 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 8.2
                 HHHHHTT-....-EEEEEGGG--- CS
       AAA_2  22 alaellfvkkekkliradaselle 45 
                 a a++l++ +++k+++ +a +  e
  KHJ33702.1 368 ARAQILKI-HSRKMTVDEAVNWPE 390
                 66788885.888888888876665 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.1   6.4e-05     0.077      22      42 ..     230     250 ..     214     255 .. 0.87
   2 ?    2.3   0.0     0.083        99      75     117 ..     312     354 ..     283     359 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.4e-05
                 EEEE--TTSSTTHHHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavalave 42 
                   + Gp GtGKt+la a+a++
  KHJ33702.1 230 ALMYGPPGTGKTLLARACAAQ 250
                 5689**************987 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.083
                 ---TTTHHHHHHHTTTS-TTCHHHHHHTTSEEEEEGGGGTT-- CS
        PhoH  75 kvdpylrplydaLkdllgaekvekllekgkievaplaymRGrT 117
                  v+  +  l ++L+ + ++++++ l  +++i v++ a +R   
  KHJ33702.1 312 EVQRTMLELLNQLDGFASDDRIKVLAATNRIDVLDPALLRSGR 354
                 566778889999**************************99555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1       2.3   2.7e+03      99     112 ..      64      79 ..      11      96 .. 0.63
   2 ?   -1.9   0.1         3   3.6e+03      14      28 ..     123     137 ..     122     139 .. 0.84
   3 !   13.3   0.0   6.4e-05     0.077       9      30 ..     231     252 ..     225     268 .. 0.84
   4 ?    3.8   0.0     0.054        64      86     125 ..     282     335 ..     259     343 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 2.3
      AAA_22  99 Eaqhlr..seealeeL 112
                 E+q+l+  +++++e++
  KHJ33702.1  64 EFQRLTheKATMVEKI 79 
                 4444433224444444 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 3
      AAA_22  14 sGtGKTtllrrlleq 28 
                 + +GK+ ++++ ++q
  KHJ33702.1 123 TRVGKSAVIKTSTRQ 137
                 579******998876 PP

  == domain 3  score: 13.3 bits;  conditional E-value: 6.4e-05
      AAA_22   9 vvtGesGtGKTtllrrlleqld 30 
                 + +G++GtGKT+l+r  + q d
  KHJ33702.1 231 LMYGPPGTGKTLLARACAAQTD 252
                 569*************999985 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.054
      AAA_22  86 lraravielliiDEaqhlr.....s.........eealeeLrsllnl.srkgvql 125
                 ++++a ++++ iDE + +      s          ++le L +l  + s++ +++
  KHJ33702.1 282 AKEKA-PAIIFIDELDAVGtkrfdSeksgdrevqRTMLELLNQLDGFaSDDRIKV 335
                 34444.59*********98766651566777787888888877766666666665 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   1.6e-05     0.019      11      42 ..     216     247 ..     209     252 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.6e-05
  Mg_chelatase  11 akraleiaaaGgHnlllvGppGsGKtmlakrl 42 
                   a+r  +i +      l++GppG+GKt+la++ 
    KHJ33702.1 216 AERFKKIGIKAPKGALMYGPPGTGKTLLARAC 247
                   5555566666666789*************975 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0     2e-05     0.024      23     116 ..     188     295 ..     173     345 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2e-05
      DUF815  23 devklddLvgidkqkealve.......nteqfle.glpa.nnvLLwGarGtGKSslvkallneyaeegLrli..evekedlkelpklve...llrerpe 107
                  + k +d+ g+dkq e+lve        +e+f + g +a + +L++G  GtGK  l +a+ +++ ++ L+l   ++ +  + +  klv+   +l++++ 
  KHJ33702.1 188 PKEKYTDVGGLDKQIEELVEaivwpmkEAERFKKiGIKApKGALMYGPPGTGKTLLARACAAQTDATFLKLAgpQLVQMFIGDGAKLVRdcfALAKEKA 286
                 5556677778888887776511111114567765455553679***********************998875334445555555555542226788889 PP

      DUF815 108 rfilfvDDL 116
                   i+f+D L
  KHJ33702.1 287 PAIIFIDEL 295
                 999999988 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   2.7e-05     0.032       3      28 ..     231     256 ..     230     325 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.7e-05
      AAA_33   3 llvGlpGsGKstlaerllkklgavll 28 
                 l+ G+pG+GK+ la+  +++++a++l
  KHJ33702.1 231 LMYGPPGTGKTLLARACAAQTDATFL 256
                 799**************999997665 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00025       0.3      30      58 ..     224     252 ..     213     308 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00025
       AAA_7  30 lknkkpvllvGptGtGKtviikdllkkld 58 
                 +k+ k  l++Gp GtGKt++++ +  + d
  KHJ33702.1 224 IKAPKGALMYGPPGTGKTLLARACAAQTD 252
                 6778899**************99888877 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.2       4.1   4.9e+03      90     131 ..      10      54 ..       4      69 .. 0.60
   2 ?   11.6   0.1   0.00014      0.17      47      70 ..     227     250 ..     221     263 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 4.1
   IstB_IS21  90 lkrarrdgklaralkrllkv.dllilDd..lgllpldqaeaellf 131
                 l+r+++ g    +l+      +l i+Dd  + l ++d + ++ l+
  KHJ33702.1  10 LERDQSAGDKDVHLQDAESEkQLDIIDDeiYNLSTVDINTRRRLL 54 
                 555555555555555544332666777733344566666665555 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00014
   IstB_IS21  47 kenivllGpsGvGKshlaialgve 70 
                  ++ ++ Gp+G+GK+ la a + +
  KHJ33702.1 227 PKGALMYGPPGTGKTLLARACAAQ 250
                 5677899***********998876 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   2.5       1.4   1.7e+03     149     178 ..      41      83 ..       4      94 .. 0.41
   2 ?   -1.4   0.0       1.3   1.6e+03      77     105 ..     109     136 ..      94     140 .. 0.72
   3 ?    9.9   0.0    0.0005       0.6      17      39 ..     227     249 ..     214     287 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.4
      AAA_11 149 k.............eklkkskekskskleqerrklkkerkels 178
                 +             e+  + ++ + ++l++e+ ++ +++k++s
  KHJ33702.1  41 NlstvdintrrrllENDSQIMKSEFQRLTHEKATMVEKIKDNS 83 
                 1333333333222222222333333333333333333333333 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.3
      AAA_11  77 glldsegekykpkivRvgneeeriseavk 105
                    ++eg++++++  Rvg+++  i+++++
  KHJ33702.1 109 AESQEEGANIDLDATRVGKSA-VIKTSTR 136
                 45678899999********99.6666665 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.0005
      AAA_11  17 seitliqGPPGtgKTktivells 39 
                 ++ +l+ GPPGtgKT    +  +
  KHJ33702.1 227 PKGALMYGPPGTGKTLLARACAA 249
                 55689**********77666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       754  (0.0420548); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 3229.74
//
Query:       KHJ33703.1  [L=466]
Description: putative sialidase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (466 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 3193.97
//
Query:       KHJ33704.1  [L=651]
Description: putative c6 finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00019   21.4  12.5    0.00055   20.0  12.5    1.7  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain
     0.0023   17.3   0.1     0.0054   16.2   0.1    1.5  1  CHZ       Histone chaperone domain CHZ


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0  12.5   6.1e-08   0.00055       3      31 ..     570     600 ..     569     607 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 6.1e-08
                 -HHHHHCT---STSSSS-HHHHHCT...HHHC CS
     Zn_clus   3 CdnCrkkKvKCdakkPaCsnCkkln...leCt 31 
                 C++Crk K  Cd+++P C++Ck  +    +C 
  KHJ33704.1 570 CQRCRKSKKGCDRQRP-CQRCKDAGltaEQCI 600
                 ****************.*****9996655665 PP

>> CHZ  Histone chaperone domain CHZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1     6e-07    0.0054       8      22 ..     228     242 ..     226     245 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 6e-07
         CHZ   8 EIDtsNIIsgGRRTR 22 
                 EI+ +NI++gGRR R
  KHJ33704.1 228 EISLDNIVEGGRRKR 242
                 9************44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (651 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       976  (0.0544369); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4498.24
//
Query:       KHJ33705.1  [L=288]
Description: putative hsp90 associated co-chaperone [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-06   29.1   0.1    2.7e-06   28.3   0.1    1.4  1  CS        CS domain
  ------ inclusion threshold ------
       0.08   12.8   0.2       0.13   12.2   0.2    1.3  1  DUF4202   Domain of unknown function (DUF4202)


Domain annotation for each model (and alignments):
>> CS  CS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.1   3.1e-10   2.7e-06      12      76 .]      25      91 ..      10      91 .. 0.90

  Alignments for each domain:
  == domain 1  score: 28.3 bits;  conditional E-value: 3.1e-10
                EEEEEE-TTCTTTTTCEEEEEETTEEEEEE....TS.CEEEEECEBSS-BETTTEEEEEETTEEEEEEEB CS
          CS 12 Vvvtiyvkkvnikkkdvkvefkerslkvki....gk.eklliegeLfgpIdpeesswtieskkveitLkK 76
                +++ti v++v  + +d+k+++k++s+++      +k ++ +  + L+++Id++e +++ ++k++e++L+K
  KHJ33705.1 25 IYLTISVPDV--SPSDLKLDLKPQSITFAGnsssQKrNYQVTLD-LYAEIDTDETKINHTAKNIELVLRK 91
                789******9..*************9999888876667777676.************************9 PP

>> DUF4202  Domain of unknown function (DUF4202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   1.4e-05      0.13     103     149 ..      79     125 ..      53     135 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.4e-05
     DUF4202 103 eeeiervaalvrkeelkrdeetqlLEDvacLvFLedqfeeFakkhee 149
                 ++++++++ ++rk+elk++    l+ D   L FL+++f+++ +++e+
  KHJ33705.1  79 NHTAKNIELVLRKKELKEEYWPRLIKDNKKLHFLKTDFDKWVDEDEQ 125
                 34567788899******************************987744 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       878  (0.0489709); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2134.89
//
Query:       KHJ33706.1  [L=227]
Description: putative snf7 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-22   78.7   8.8    3.9e-22   78.7   8.8    2.0  2  Snf7        Snf7
  ------ inclusion threshold ------
      0.036   14.5   2.5         12    6.4   0.1    3.1  3  CRR7        Protein CHLORORESPIRATORY REDUCTION 7
      0.071   12.0   0.0        0.1   11.5   0.0    1.2  1  DUF4910     Domain of unknown function (DUF4910)
       0.13   12.4   4.6       0.39   10.9   4.5    1.9  1  GCN5L1      GCN5-like protein 1 (GCN5L1)
       0.58    9.4   5.1       0.23   10.7   3.1    1.4  2  Vps54_N     Vacuolar-sorting protein 54, of GARP complex
        2.3    8.7  10.1        1.4    9.4   0.2    3.4  4  RecX        RecX family


Domain annotation for each model (and alignments):
>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.7   8.8   1.3e-25   3.9e-22       4     160 ..      22     190 ..      19     198 .. 0.91
   2 ?    0.1   2.4      0.18   5.4e+02     132     149 ..     201     218 ..     196     226 .. 0.79

  Alignments for each domain:
  == domain 1  score: 78.7 bits;  conditional E-value: 1.3e-25
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-.........HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Snf7   4 rsLrkaerkldkkqeslekkikkleaelkklakkgn.........kdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqgaka 93 
                 + +r+++rkld+ +  ++  ++k +  + + ++  +         ++  ++++++ +r++kq ++l +++a+l++vs+++ ++ +  ++  + +++ ++
  KHJ33706.1  22 QLIRQNTRKLDRDIAATKVVENKAKTLIIQANRRAQrnpsnskqvEKDIRVFAREFIRARKQASRLATSKAQLNSVSMQVTEAFAVRKIEGSIRSSVRI 120
                 679************999999999999988777766678899999999*************************************************** PP

                 HHHHHHCTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTT-GGTTHHHHHHHHHHHHHHHHHCSH.....H CS
        Snf7  94 mkamnkkvdidkidklmdeiedqmekaeeisEalsrslddadeedEeeleaeLdaLeqelgdeell....d 160
                 mk +n+ v+++++  +m+e+++++ ka++i+E++++sl   d e+Eee e e+d++++e++ +e       
  KHJ33706.1 121 MKDINSLVRLPELTGTMQELSQELVKAGIIEEMIGDSLPE-DLEEEEEAETEIDKVLSEILSSEIGkiepT 190
                 **************************************65.99*****************99884344433 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.18
                 TT-GGTTHHHHHHHHHHH CS
        Snf7 132 ddadeedEeeleaeLdaL 149
                 ++++ee+Ee+ ea Ld +
  KHJ33706.1 201 TSVEEEEEEDAEAMLDHM 218
                 456999********9976 PP

>> CRR7  Protein CHLORORESPIRATORY REDUCTION 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1    0.0041        12      32      63 ..      19      50 ..      12      54 .. 0.89
   2 ?    0.1   0.0      0.38   1.1e+03      50      82 ..      76     108 ..      61     109 .. 0.78
   3 ?    6.0   0.2    0.0055        17      25      71 ..     136     185 ..     129     189 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0041
                HHHHHHHH-TTTS-HHHHH---HHHHHHHHHH CS
        CRR7 32 kLkelLekeqdelprdlaklesleeqaqyLld 63
                k ++l++++ ++l+rd+a+ + +e++a+ L+ 
  KHJ33706.1 19 KCNQLIRQNTRKLDRDIAATKVVENKAKTLII 50
                667899999********************985 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.38
                 H---HHHHHHHHHHH---EEEETTEEEEEEE-- CS
        CRR7  50 klesleeqaqyLldtaceLeigpggylqWYaVR 82 
                 ++ + ++qa++L ++  +L+  + ++   +aVR
  KHJ33706.1  76 EFIRARKQASRLATSKAQLNSVSMQVTEAFAVR 108
                 455678899999999999998888888888887 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0055
                 -HHHHHHHHHH..HHHH.-TTTS-HHHHH---HHHHHHHHHHH---EEEE CS
        CRR7  25 taeellekLke..lLek.eqdelprdlaklesleeqaqyLldtaceLeig 71 
                 t +el + L +  ++e+   d+lp+dl++ e+ e ++++ l+++   eig
  KHJ33706.1 136 TMQELSQELVKagIIEEmIGDSLPEDLEEEEEAETEIDKVLSEILSSEIG 185
                 678888888542378888899*************9999998887766665 PP

>> DUF4910  Domain of unknown function (DUF4910)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.4e-05       0.1     122     172 ..     138     183 ..     100     192 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.4e-05
                 HHHHH-GGGGGGEEEEEE--S--SSS-EEEE--TTSSSHHHHHHHHHHHHS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     DUF4910 122 tylsrneeklkkikaGlvltcvGdegalsykksrrgdaeiDrvvahvlkes 172
                   ls+     + +kaG++ +++Gd+    +++  + ++eiD+v+ ++l+++
  KHJ33706.1 138 QELSQ-----ELVKAGIIEEMIGDSLPEDLEEEEEAETEIDKVLSEILSSE 183
                 33333.....3699*********************************9876 PP

>> GCN5L1  GCN5-like protein 1 (GCN5L1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   4.5   0.00013      0.39      22      82 ..      36      96 ..      15     103 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00013
      GCN5L1 22 eaiesaaaltealvdklnsgvaeayanqkklekeakalqanvakfakqtdqWlalvesfns 82
                 a++ +++ +++l+ + n++ ++  +n k++ek+++ ++++  + +kq++  ++   ++ns
  KHJ33706.1 36 AATKVVENKAKTLIIQANRRAQRNPSNSKQVEKDIRVFAREFIRARKQASRLATSKAQLNS 96
                345567889999***************************************9999888886 PP

>> Vps54_N  Vacuolar-sorting protein 54, of GARP complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   3.1   7.7e-05      0.23       4     130 ..       4     127 ..       1     148 [. 0.77
   2 ?   -3.9   0.0       2.2   6.6e+03     179     191 ..     167     179 ..     154     182 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 7.7e-05
     Vps54_N   4 ieevyFdeefdpikyeLkklpddelsyesiekevkklks...qhdvvskklsqlilekreefvkelseveeiekelkesvvickngrra...Ldlakke 96 
                 i +v+F+++   +            +++ i +++ kl +   + +vv++k ++li++ +   +++ s+ +++ek+++  +++   +r++   L+++k +
  KHJ33706.1   4 IKAVFFKPDPQVQVRK---------CNQLIRQNTRKLDRdiaATKVVENKAKTLIIQANRRAQRNPSNSKQVEKDIRVFAREFIRARKQasrLATSKAQ 93 
                 5555665555555333.........344455555555431116789************************************9999985444999**** PP

     Vps54_N  97 ltrtsLellakskkrqllkkllktltaikelrel 130
                 l  +s+++  +   r++  ++ ++ + +k +++l
  KHJ33706.1  94 LNSVSMQVTEAFAVRKIEGSIRSSVRIMKDINSL 127
                 ***9**9999999999888888888888887765 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 2.2
     Vps54_N 179 lveekldsqLsev 191
                   e+++d++Lse+
  KHJ33706.1 167 EAETEIDKVLSEI 179
                 3455666666655 PP

>> RecX  RecX family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.7     0.049   1.5e+02      59      94 ..      21      56 ..      20      68 .. 0.80
   2 ?    0.4   0.1      0.28   8.3e+02      28      43 ..      72      87 ..      68      95 .. 0.77
   3 ?    9.4   0.2   0.00046       1.4      46      84 ..     138     177 ..     134     199 .. 0.77
   4 ?   -2.0   0.0       1.6   4.8e+03      62      83 ..     197     219 ..     192     224 .. 0.63

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.049
                HHHHHHHHTTS-HHHHHHHHHHHHHHHTTTS-HHHH CS
        RecX 59 eelieqaleeldeeeqarelaekklkklkkeedeke 94
                ++li q +++ld++ +a++++e k+k+l  ++++++
  KHJ33706.1 21 NQLIRQNTRKLDRDIAATKVVENKAKTLIIQANRRA 56
                57899999999***************9954444333 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.28
                HHHHHHHHHHHHH--- CS
        RecX 28 rfAesfvrsrlrsrgy 43
                 fA++f+r r++ ++ 
  KHJ33706.1 72 VFAREFIRARKQASRL 87
                5999999999986655 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00046
                 HHHHHHHHTTT--HHHHHHHHT.TS-HHHHHHHHHHHHHH CS
        RecX  46 rrikqeLkqkGiseelieqale.eldeeeqarelaekklk 84 
                 + + qeL + Gi ee+i + l  +l+eee+a+  + k l+
  KHJ33706.1 138 QELSQELVKAGIIEEMIGDSLPeDLEEEEEAETEIDKVLS 177
                 5789*****************9666666666665555544 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 1.6
                 HHHHHT.TS-HHHHHHHHHHHHH CS
        RecX  62 ieqale.eldeeeqarelaekkl 83 
                 i+q ++ e++eee+a++++   +
  KHJ33706.1 197 IAQNTSvEEEEEEDAEAMLDHMR 219
                 55555656677777777766554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1237  (0.0689944); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 1658.29
//
Query:       KHJ33707.1  [L=1147]
Description: putative glycerophosphodiester phosphodiesterase gde1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-72  244.8   0.0    2.6e-72  243.7   0.0    1.6  1  GDPD      Glycerophosphoryl diester phosphodiesterase family
    1.5e-24   86.4   2.0    2.5e-08   34.4   0.2    4.7  5  Ank_2     Ankyrin repeats (3 copies)
    3.6e-21   75.2   5.1    3.7e-09   36.9   0.0    6.2  7  Ank_4     Ankyrin repeats (many copies)
    4.6e-21   74.6   0.2    7.5e-08   32.5   0.0    5.6  5  Ank_5     Ankyrin repeats (many copies)
    1.5e-16   61.3  10.0    4.1e-10   40.1   0.1    4.0  4  SPX       SPX domain
    3.5e-15   54.6  10.0    4.8e-05   23.4   0.0    9.2 10  Ank_3     Ankyrin repeat
    2.5e-12   46.6   0.5      0.002   18.5   0.0    5.4  5  Ank       Ankyrin repeat


Domain annotation for each model (and alignments):
>> GDPD  Glycerophosphoryl diester phosphodiesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  243.7   0.0     1e-75   2.6e-72       1     258 [.     804    1122 ..     804    1123 .. 0.96

  Alignments for each domain:
  == domain 1  score: 243.7 bits;  conditional E-value: 1e-75
                  TTTTTTTSS........TTSHHHHHHHHHTT-SEEEEEEEE-TTS-EEE-SSSBSTTTCSCCCH.BGGGS-HHHHHTST.................. CS
        GDPD    1 HRGasgnlp........EnTlesfakAaelGadyiEfDvqlTkDgvpVvlHDfnldrttdvagrldvkdltleelkrld.................. 71  
                  HRG+++nl+        EnTl+sf++Aa lGa+y+EfDvqlTkD +pV++HDf + +t+ +a+   v+ ltle++ + +                  
  KHJ33707.1  804 HRGLGKNLTsnkslqlgENTLQSFIAAANLGANYVEFDVQLTKDHIPVIYHDFLVSETGIDAP---VHTLTLEQFLHVNdsmprtrrpsilsndsls 897 
                  ***************************************************************...******************************* PP

                  .....................................ECCTTCCCCSCCCSSGCCB...BHHHHHHH.HHHCCSEEEEEEECCCCCCCHHHHHHTCH CS
        GDPD   72 .....................................kiakenkaqlsenrvrlefpfptleevlkk.pqnvglnieikipmlseakeeeelqivke 130 
                                                       k  k+ ka++++n ++   pf+tlee++ k p++vg+nie k+pml+e + +e + + +e
  KHJ33707.1  898 snnhkvvrgsdrqrsmslnpsvteynmaermkhtrdfKL-KGFKANSRGNFIQ--APFTTLEEMFLKlPEHVGFNIEMKYPMLHEFEVHEMDAYTVE 991 
                  *************************88886666666444.6666666666664..7*********999***************************** PP

                  HHCCCCCSCHHTT..STTCSCEEEESTHHHHHHHHHTCTCTEEEEEEHHHHHHC-E....EECHCCCCCCCTCCCCHHCCCHCCCEB.CHHHHHHHT CS
        GDPD  131 ilksvdeilkkvlkkadkrkvifssfnpdilkllrekqpklpllflteggteaead...ssleraakfakadallgevsavaeglgdpdlVkraksr 224 
                  ++ +vd++l+kv + ++krk+ifssfnpd + +l+ kqp++p+lflt+ g +a  d   ssl +a++fa  ++llg+vsa++++ + p+lVk +k++
  KHJ33707.1  992 LNNFVDTVLSKVYDLGKKRKIIFSSFNPDVCLMLSFKQPSIPILFLTDAGVSAVSDiraSSLHEAIRFARRWNLLGIVSAAEPLCNSPRLVKVVKEN 1088
                  ************************************************************************************************* PP

                  T-EEEEBSB-THSHHHHHHHHCCC-SEEEES-HH CS
        GDPD  225 glvvhvytvnnedeeemkrlleagvdgvitDfpd 258 
                  glv++ y+  n+d  +++ +++ g+d+vi+D++ 
  KHJ33707.1 1089 GLVCVSYGSLNNDPIKVQKQVDEGIDAVIVDSVL 1122
                  ************9999999************986 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       6.6   1.7e+04      38      47 ..      95     104 ..      92     114 .. 0.56
   2 ?   -0.9   0.0      0.98   2.5e+03       4      49 ..     213     268 ..     211     289 .. 0.51
   3 !   14.7   0.0   1.4e-05     0.035      23      74 ..     360     433 ..     336     446 .. 0.66
   4 !   34.4   0.2   9.8e-12   2.5e-08      29      76 ..     456     510 ..     441     519 .. 0.81
   5 !   33.5   0.0   1.8e-11   4.7e-08      22      78 ..     515     581 ..     508     586 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 6.6
       Ank_2  38 nleivklLle 47 
                 n e+v++Lle
  KHJ33707.1  95 NDEVVRALLE 104
                 3356666664 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.98
       Ank_2   4 AakngnlelvklLlegadpn....k...ngktaLhyAakngnleivklLleh...a 49 
                 A+ n+nl+l++  le+++++           + L+ A++  ++ ++k+ le+   +
  KHJ33707.1 213 AIHNDNLSLLREVLENVNIDfnlpViqkLLTSLLQRAISCKSKLAIKYCLEKiisL 268
                 44454556666666443333324303322234444666665555566666654441 PP

  == domain 3  score: 14.7 bits;  conditional E-value: 1.4e-05
       Ank_2  23 n...k.ngktaLhyAakngnleivklLle...........h....ad...ndgrtpLhyAarsghleivklLle 74 
                     +  g+ +LhyAa+ +   i+++ ++           h    +d   n+  tpL +++  gh  + k Ll+
  KHJ33707.1 360 LvsrDkYGRIPLHYAAQLDFPIICQIVIKfmiswdlidpeHekevMDfedNEKLTPLDLSVTGGHATTTKALLD 433
                 13242599*********9865555555552222555544427677336567778*******99*******9994 PP

  == domain 4  score: 34.4 bits;  conditional E-value: 9.8e-12
       Ank_2  29 aLhyAakngnleivklLleh......adndgrtpLhyAarsghleivklLlek.g 76 
                  L +A+k + + i++lL+e       +d+ g+t+Lh+Aar+gh++++k+L+++ +
  KHJ33707.1 456 LLAIATKFNFTAIMELLVEDnininwQDKAGETALHVAARFGHTDCAKILFNCeN 510
                 6889*****99*******955666666699********************95532 PP

  == domain 5  score: 33.5 bits;  conditional E-value: 1.8e-11
       Ank_2  22 pn...k.ngktaLhyAakngnleivklLleh......adndgrtpLhyAarsghleivklLlekgad 78 
                 ++   k + +t+Lh+A+  g+l +v+lL+e+      +d++g+t+  +Aa  gh ei++ L e  +d
  KHJ33707.1 515 VElteKcFSWTPLHVACVDGHLPMVELLIEKganikkLDSSGWTAKEHAALRGHMEIARRLAEVTSD 581
                 444332688********************977666667799*****888889*******99976655 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       2.6   6.7e+03      12      26 ..      94     108 ..      87     122 .. 0.76
   2 ?   -0.3   0.0      0.69   1.8e+03       6      44 ..     211     251 ..     210     260 .. 0.74
   3 ?    2.2   0.1      0.12     3e+02       3      47 ..     243     289 ..     241     294 .. 0.82
   4 ?    3.9   0.0     0.033        85      17      44 ..     345     376 ..     335     378 .. 0.70
   5 ?    0.8   0.0      0.32   8.2e+02      32      55 .]     409     432 ..     395     432 .. 0.86
   6 !   26.7   0.1   2.4e-09   6.1e-06      14      54 ..     465     505 ..     455     506 .. 0.83
   7 !   36.9   0.0   1.4e-12   3.7e-09       2      54 ..     524     575 ..     523     576 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.6
       Ank_4  12 grlelvrlLlekgad 26 
                 ++ e+vr Lle + +
  KHJ33707.1  94 ENDEVVRALLELRSQ 108
                 688999999997755 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.69
       Ank_4   6 hyaaisgrlelvrlLlek.gadinaqdnrsGe..talhiAak 44 
                 ++a++  +l l+r  le+ ++d n    ++ +  ++l++A++
  KHJ33707.1 211 DQAIHNDNLSLLREVLENvNIDFNLP-VIQKLltSLLQRAIS 251
                 67899999999999999999999987.555443257777765 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.12
       Ank_4   3 taLhyaaisgrlel.vrlLlekgadinaqdnrsGetalhi.Aakrgn 47 
                 t L ++ais++ +l ++++lek +++ + d++ ++++lh+ ++++g+
  KHJ33707.1 243 TSLLQRAISCKSKLaIKYCLEKIISLEELDDIHQRNCLHRfVISIGR 289
                 667777888888887*******9******9999******94446665 PP

  == domain 4  score: 3.9 bits;  conditional E-value: 0.033
       Ank_4  17 vrlLlekgadinaq....dnrsGetalhiAak 44 
                 ++++le+   +++      +++G+ +lh+Aa+
  KHJ33707.1 345 LHFILENLLPVHRNalvsRDKYGRIPLHYAAQ 376
                 5666666666444333334899********95 PP

  == domain 5  score: 0.8 bits;  conditional E-value: 0.32
       Ank_4  32 nrsGetalhiAakrgnveilklLl 55 
                 +++ +t+l+  + +g+   +k Ll
  KHJ33707.1 409 DNEKLTPLDLSVTGGHATTTKALL 432
                 78899***********99988886 PP

  == domain 6  score: 26.7 bits;  conditional E-value: 2.4e-09
       Ank_4  14 lelvr.lLlekgadinaqdnrsGetalhiAakrgnveilklL 54 
                 + +++ lL+e +++in q ++ Getalh Aa++g+ +++k L
  KHJ33707.1 465 FTAIMeLLVEDNININWQ-DKAGETALHVAARFGHTDCAKIL 505
                 555442888*********.********************987 PP

  == domain 7  score: 36.9 bits;  conditional E-value: 1.4e-12
       Ank_4   2 ltaLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAakrgnveilklL 54 
                 +t+Lh a+ +g+l++v+lL+ekga+i +  ++sG+ta  +Aa+rg+ ei++ L
  KHJ33707.1 524 WTPLHVACVDGHLPMVELLIEKGANIKKL-DSSGWTAKEHAALRGHMEIARRL 575
                 69**************************9.*****************999865 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       1.2   3.1e+03      22      37 ..     212     228 ..     211     236 .. 0.79
   2 ?    3.2   0.0     0.045   1.2e+02       8      36 ..     359     387 ..     355     399 .. 0.79
   3 ?    4.9   0.0     0.014        35      13      44 ..     409     440 ..     406     447 .. 0.83
   4 !   32.5   0.0   2.9e-11   7.5e-08       2      42 ..     472     515 ..     471     523 .. 0.82
   5 !   26.8   0.0   1.8e-09   4.5e-06      16      54 ..     524     561 ..     509     563 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.2
       Ank_5  22 vAakygaadvvrlLl.a 37 
                 +A+++ +++++r+ l +
  KHJ33707.1 212 QAIHNDNLSLLREVLeN 228
                 69***********9943 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.045
       Ank_5   8 dvnrldgggntpLhvAakygaadvvrlLl 36 
                 ++  +d++g  pLh+Aa    + ++++ +
  KHJ33707.1 359 ALVSRDKYGRIPLHYAAQLDFPIICQIVI 387
                 56688999999******998888888877 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.014
       Ank_5  13 dgggntpLhvAakygaadvvrlLlargadlnl 44 
                 d+++ tpL +++ +g+a+  + Ll+++ + + 
  KHJ33707.1 409 DNEKLTPLDLSVTGGHATTTKALLDFQRHKGS 440
                 88999******************976666555 PP

  == domain 4  score: 32.5 bits;  conditional E-value: 2.9e-11
       Ank_5   2 lehgpadvnrldgggntpLhvAakygaadvvrlLl...argadl 42 
                 l ++++++n++d+ g+t+LhvAa+ g+ d++++L+   +  +d 
  KHJ33707.1 472 LVEDNININWQDKAGETALHVAARFGHTDCAKILFnceNQKVDV 515
                 55677******************************665555555 PP

  == domain 5  score: 26.8 bits;  conditional E-value: 1.8e-09
       Ank_5  16 gntpLhvAakygaadvvrlLlargadlnltdsrGltald 54 
                 + tpLhvA+  g++++v+lL++ ga+++  ds+G+ta +
  KHJ33707.1 524 W-TPLHVACVDGHLPMVELLIEKGANIKKLDSSGWTAKE 561
                 3.**********************************955 PP

>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.1   0.1   1.6e-13   4.1e-10       1      29 [.       1      29 [.       1      44 [. 0.93
   2 ?    3.9   1.0     0.017        43     183     210 ..      44      71 ..      30      95 .. 0.81
   3 !   21.3   0.0   8.5e-08   0.00022     336     372 ..      98     134 ..      77     147 .. 0.83
   4 ?   -1.3   0.1      0.62   1.6e+03     237     276 ..     166     204 ..     150     242 .. 0.57

  Alignments for each domain:
  == domain 1  score: 40.1 bits;  conditional E-value: 1.6e-13
         SPX  1 MKFakeLeenlvpEWrdaYldYkqLKKlI 29
                MKF++ L +n vpEW + Y+dYk+LKKlI
  KHJ33707.1  1 MKFGHNLARNKVPEWSSNYIDYKGLKKLI 29
                ****************************9 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.017
         SPX 183 ekeFferLdseLnkvetFykakeeefte 210
                  ++F+ +Ld  L+ v++Fy +k  +  +
  KHJ33707.1  44 LAKFLFFLDRNLEVVDNFYNKKFADISR 71 
                 579*****************99766655 PP

  == domain 3  score: 21.3 bits;  conditional E-value: 8.5e-08
         SPX 336 lkkafvelYrgLelLKsYqeLNrtAFrKIlKKfDKvt 372
                   +a++el  + + L+ + e+Nr +F KI+KK DK+ 
  KHJ33707.1  98 VVRALLELRSQFRNLQWFGEVNRRGFVKITKKMDKRF 134
                 6789*******************************97 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 0.62
         SPX 237 lyrwreifglksveaqvfessreldrgelseeardkevse 276
                  ++w +ifg+   +++  +s + +++  ++++++  + s+
  KHJ33707.1 166 INNWLSIFGDA-KNSEDAFSIHKSKSFTHESSSQKINLSK 204
                 45566666666.5555555555555554333222222211 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       5.1   1.3e+04      12      23 ..      93     104 ..      92     106 .. 0.82
   2 ?    2.2   0.1      0.15   3.9e+02       8      30 ..     212     234 ..     210     235 .. 0.92
   3 ?    1.8   0.0       0.2   5.2e+02       4      28 ..     244     267 ..     243     270 .. 0.85
   4 ?    4.1   0.0     0.038        97       5      23 ..     370     392 ..     366     400 .. 0.70
   5 ?   -1.5   0.0       2.5   6.5e+03       3      23 ..     413     433 ..     411     439 .. 0.86
   6 ?    3.2   0.1     0.073   1.9e+02       5      30 ..     456     480 ..     454     481 .. 0.86
   7 !   14.5   0.0   1.6e-05      0.04       2      29 ..     486     515 ..     485     517 .. 0.83
   8 !   23.4   0.0   1.9e-08   4.8e-05       3      29 ..     524     549 ..     522     551 .. 0.94
   9 ?   -0.0   0.0       0.8     2e+03       2      23 ..     556     577 ..     555     582 .. 0.84
  10 ?   -0.9   0.0       1.6   4.1e+03       4      15 ..    1051    1062 ..    1050    1067 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 5.1
       Ank_3  12 sgnleivkfLle 23 
                 + n e+v++Lle
  KHJ33707.1  93 NENDEVVRALLE 104
                 567789*****8 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.15
       Ank_3   8 lAarsgnleivkfLlenkgadvn 30 
                 +A++++nl++++  len ++d+n
  KHJ33707.1 212 QAIHNDNLSLLREVLENVNIDFN 234
                 6999*************9**998 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.2
       Ank_3   4 tpLhlAarsgnleivkfLlenkgad 28 
                 ++L +A+++ +   +k++le k + 
  KHJ33707.1 244 SLLQRAISCKSKLAIKYCLE-KIIS 267
                 67889999999999******.6765 PP

  == domain 4  score: 4.1 bits;  conditional E-value: 0.038
       Ank_3   5 pLhlAarsgnlei....vkfLle 23 
                 pLh+Aa  + + i    +kf++ 
  KHJ33707.1 370 PLHYAAQLDFPIIcqivIKFMIS 392
                 9**********753333777766 PP

  == domain 5  score: -1.5 bits;  conditional E-value: 2.5
       Ank_3   3 etpLhlAarsgnleivkfLle 23 
                  tpL l +  g+ +  k+Ll+
  KHJ33707.1 413 LTPLDLSVTGGHATTTKALLD 433
                 69**********999999998 PP

  == domain 6  score: 3.2 bits;  conditional E-value: 0.073
       Ank_3   5 pLhlAarsgnleivkfLlenkgadvn 30 
                 +L +A +++ ++i+++L+e  ++++n
  KHJ33707.1 456 LLAIATKFNFTAIMELLVE-DNININ 480
                 567888899999*******.9**999 PP

  == domain 7  score: 14.5 bits;  conditional E-value: 1.6e-05
       Ank_3   2 GetpLhlAarsgnleivkfLle..nkgadv 29 
                 Get+Lh+Aar+g+++ +k L++  n  +dv
  KHJ33707.1 486 GETALHVAARFGHTDCAKILFNceNQKVDV 515
                 9**************898888866666665 PP

  == domain 8  score: 23.4 bits;  conditional E-value: 1.9e-08
       Ank_3   3 etpLhlAarsgnleivkfLlenkgadv 29 
                 +tpLh+A+  g+l++v++L+e kga++
  KHJ33707.1 524 WTPLHVACVDGHLPMVELLIE-KGANI 549
                 8********************.9**98 PP

  == domain 9  score: -0.0 bits;  conditional E-value: 0.8
       Ank_3   2 GetpLhlAarsgnleivkfLle 23 
                 G+t+  +Aa+ g+ ei++ L e
  KHJ33707.1 556 GWTAKEHAALRGHMEIARRLAE 577
                 6777779*********999976 PP

  == domain 10  score: -0.9 bits;  conditional E-value: 1.6
       Ank_3    4 tpLhlAarsgnl 15  
                  + Lh+A+r+++ 
  KHJ33707.1 1051 SSLHEAIRFARR 1062
                  68******9875 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.011        29       1      14 [.     366     379 ..     366     397 .. 0.67
   2 ?    1.6   0.0      0.17   4.4e+02       4      23 ..     414     435 ..     412     446 .. 0.83
   3 ?   -3.1   0.0       5.2   1.3e+04      17      31 ..     468     483 ..     457     484 .. 0.69
   4 !   14.0   0.0     2e-05     0.052       2      21 ..     486     505 ..     485     515 .. 0.89
   5 !   18.5   0.0   7.7e-07     0.002       3      31 ..     524     553 ..     524     554 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.011
                 TSBBHHHHHHHHTT CS
         Ank   1 dGnTPLHlAatngk 14 
                 +G+ PLH+Aa+ + 
  KHJ33707.1 366 YGRIPLHYAAQLDF 379
                 6899*****95443 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.17
                 BHHHHHHHHTTHHHHHHHH..T CS
         Ank   4 TPLHlAatngkkriiklLL..h 23 
                 TPL l +t+g++  +k+LL  +
  KHJ33707.1 414 TPLDLSVTGGHATTTKALLdfQ 435
                 9****99****99999999552 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 5.2
                 HHHHHH.TTTSTTCBT CS
         Ank  17 iiklLL.hGAnlnald 31 
                 i +lL+ +  n+n +d
  KHJ33707.1 468 IMELLVeDNININWQD 483
                 7788887778888766 PP

  == domain 4  score: 14.0 bits;  conditional E-value: 2e-05
                 SBBHHHHHHHHTTHHHHHHH CS
         Ank   2 GnTPLHlAatngkkriiklL 21 
                 G T+LH+Aa++g+++++k L
  KHJ33707.1 486 GETALHVAARFGHTDCAKIL 505
                 89***************976 PP

  == domain 5  score: 18.5 bits;  conditional E-value: 7.7e-07
                 BBHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank   3 nTPLHlAatngkkriiklLL.hGAnlnald 31 
                 +TPLH+A+  g++ +++lL+ +GAn+  ld
  KHJ33707.1 524 WTPLHVACVDGHLPMVELLIeKGANIKKLD 553
                 6*******778899******99***86665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1147 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.40
# Mc/sec: 8576.36
//
Query:       KHJ33708.1  [L=118]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.08   13.2   0.0       0.11   12.7   0.0    1.3  1  Cas6_N    Cas6 N-terminal domain


Domain annotation for each model (and alignments):
>> Cas6_N  Cas6 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   6.4e-06      0.11      12      32 ..      37      57 ..      27      70 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 6.4e-06
                -EE--SSTTHHHHHHHHTSSG CS
      Cas6_N 12 DvilppltSKvskyillslsp 32
                 v lpp tSK+++ i+++l  
  KHJ33708.1 37 PVTLPPKTSKLARHIFSKLAT 57
                689**************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       243  (0.0135535); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 903.91
//
Query:       KHJ33709.1  [L=977]
Description: putative plasma membrane h+-atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.4e-39  132.8   0.1    9.4e-39  132.8   0.1    3.2  4  E1-E2_ATPase     E1-E2 ATPase
    5.9e-17   62.7   0.1    1.4e-16   61.5   0.0    1.7  2  Hydrolase        haloacid dehalogenase-like hydrolase
    1.8e-08   33.9   0.1    6.3e-08   32.2   0.0    1.9  2  Cation_ATPase_N  Cation transporter/ATPase, N-terminus
  ------ inclusion threshold ------
       0.02   14.7   0.0      0.038   13.7   0.0    1.4  1  Hydrolase_3      haloacid dehalogenase-like hydrolase
        2.8    7.8   6.6         19    5.1   0.4    2.7  2  FixP_N           N-terminal domain of cytochrome oxidase-cbb3


Domain annotation for each model (and alignments):
>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.8   0.1   2.6e-42   9.4e-39       6     181 .]     171     392 ..     168     392 .. 0.96
   2 !    3.9   0.0    0.0098        35      52      81 ..     586     615 ..     574     619 .. 0.85
   3 ?   -3.3   0.0       1.5   5.4e+03     115     136 ..     781     802 ..     759     816 .. 0.61
   4 ?   -4.5   0.6       3.7   1.3e+04     127     133 ..     906     912 ..     892     924 .. 0.41

  Alignments for each domain:
  == domain 1  score: 132.8 bits;  conditional E-value: 2.6e-42
                   EEEEE-TTS-EEEEGGG--TTSEEEEETT-B--SEEEEEE......................................E-S..EEE-TTTS---S-E CS
  E1-E2_ATPase   6 takvirdgteeeidakelvpGDivllkagdrvpaDgrive......................................gsa..evdesaLTGEslpv 62 
                   +++virdg e+ei+a+elvpGDiv+++ g++vpaD+ri++                                      g a   +d+sa+TGEsl+v
    KHJ33709.1 171 RTTVIRDGHEVEIKARELVPGDIVIVEDGNVVPADCRIISaydnpngwaeyqreleaqagesnnekddddeigekhgsGYAllAIDQSAMTGESLAV 267
                   589*************************************************************************9877789************** PP

                   E-G-TTEE-TT-EEEE-EEEEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTT......HHHHH.HH CS
  E1-E2_ATPase  63 ekekgdmvfsGtvvvsgeakavVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvflialllgksla......eallr.al 152
                   +k   d ++  t  ++g+a a+Vt+ ++ +++g+ a+lv+ a +++ +++ +++++g  l ++v++++l+ ++  +++  s+a      + ll+ al
    KHJ33709.1 268 DKYVADVIYYTTGCKRGKAYAIVTHSAKMSFVGRTASLVSGA-QDQGHFKAIMNSIGTALLVLVVAFILASWIGGFFHHLSIAtpqnssNNLLHyAL 363
                   ******************************************.9*********************************9999999999**666666** PP

                   HHHHHHS-TTHHHHHHHHHHHHHHHHHHT CS
  E1-E2_ATPase 153 allvaaiPcaLplavplalalgarrlakk 181
                    ll++ +P +Lp++++++la+ga+ lak+
    KHJ33709.1 364 ILLIVGVPVGLPVVTTTTLAVGAAYLAKE 392
                   *************************9985 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.0098
                   -TTTS---S-EE-G-TTEE-TT-EEEE-EE CS
  E1-E2_ATPase  52 esaLTGEslpvekekgdmvfsGtvvvsgea 81 
                     +LTG++ ++ ke+ +m+  Gt v + e 
    KHJ33709.1 586 VKMLTGDAIAIAKETCKMLALGTKVYNSER 615
                   579*********************998765 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 1.5
                   HHHHHHHHHHHHHHHHHHHHHS CS
  E1-E2_ATPase 115 ldklgkvlvpvvlliallvfli 136
                   l k+  + v++++l+al ++++
    KHJ33709.1 781 LPKIWIISVVLGILLALGTWVL 802
                   5555555555555555555554 PP

  == domain 4  score: -4.5 bits;  conditional E-value: 3.7
                   HHHHHHH CS
  E1-E2_ATPase 127 lliallv 133
                   +++++++
    KHJ33709.1 906 IAVTIVI 912
                   1111222 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.9     1e+04      94     125 ..     153     180 ..     113     231 .. 0.61
   2 !   61.5   0.0   3.8e-20   1.4e-16       1     210 []     408     675 ..     408     675 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.9
                 HHHCHHHHHHTTHHHHHHHHHHTHHBHTTHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  94 qsqgrtvallqaralavftiadplkvkpeaae 125
                 q++    ++    + +++++  +  v  +  e
  KHJ33709.1 153 QEKQAADVVA--SLKGDIALRTT--VIRDGHE 180
                 4444444444..55555555544..4443333 PP

  == domain 2  score: 61.5 bits;  conditional E-value: 3.8e-20
                 SSEEEEESBTTTBCHH.....HHHHHHHHHHCHHHHHHHHHH....HHCHHHHHHHHHHHHH.........HHHHHHHHHETTTE.............. CS
                 xxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxx.............. RF
   Hydrolase   1 iktvvfDkdGTLttge.....psvedvivsaalalaaaletg....sehpigkalvaaakar.........sgaltgfatfigrg.............. 67 
                 +++++ Dk+GTLt  +     p v + ++ + +   aal+ +    s  pi k  +   k           +     ++t +                 
  KHJ33709.1 408 VDVLCSDKTGTLTANQlsirdPFVAEGVDVNWMMAVAALASShnvkSLDPIDKVTILTLKRYprakeilsqG-----WRT-EK-Ftpfdpvskritavv 499
                 57999********99944555555555555544444444444577888888888888888887776444443.....444.11.123444447778877 PP

                 .......HHHHTHHHHHHHH.....HCHHHHHHHHHHHHHHCHHHHHH.......TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHH CS
                 .......xxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  68 .......ayaigkpewltal.....dippdlgaaigsaqsqgrtvall.......qaralavftiadplkvkpeaaeavasLkaagievvlltgdnpet 147
                        + a+g p+ +  l     ++++ +++++++  ++g  +  +       + ++l+++ + dp  +++++a ++a+ +  g+ v +ltgd  + 
  KHJ33709.1 500 vkdgvtyTCAKGAPKAILNLsncskEVSDMYKSKVTEFARRGFRSLGVavkegdgDWQLLGMLPMFDP--PREDTASTIAEAQVLGLSVKMLTGDAIAI 596
                 888888888888888888887677777777777777777777777777999998888***********..***************************** PP

                 HHHHHHHTT........GGGESEEEEHHCES........STTTSHHHHHHHHHHHTSTGGGEEEEESSHHHHHHHHHTT CS
                 xxxxxxxxx........xxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 148 aeraanqlG........ddyfdaviasdiet........vakpspegkvaaireLqgkpeevamVGDgvnDaaalaaAg 210
                 a+++ + l         ++ +++ +++++          +a++ pe+k ++++ Lq +++ +am GDgvnDa+ l++ +
  KHJ33709.1 597 AKETCKMLAlgtkvynsERLIHGGLSGTTQHdlvekadgFAEVFPEHKYQVVEMLQQRGHLTAMTGDGVNDAPSLKKSD 675
                 **8877744459777763333333333333367778888************************************9865 PP

>> Cation_ATPase_N  Cation transporter/ATPase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.5   5.4e+03      32      56 ..       3      27 ..       2      28 .. 0.77
   2 !   32.2   0.0   1.8e-11   6.3e-08      11      68 ..      70     126 ..      58     127 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.5
  Cation_ATPase_N 32 kyGpNelkekkkkslwvkllkqftn 56
                     ++G N+ +e +k   +  l++ ++n
       KHJ33709.1  3 QNGANTYEEDEKLGEYGNLVRYISN 27
                     899***9999888887777777666 PP

  == domain 2  score: 32.2 bits;  conditional E-value: 1.8e-11
  Cation_ATPase_N  11 ekLetdlenGLtqaeaaerlkkyGpNelkekkkkslwvkllkqftnplvilLlvaalv 68 
                      e L+td + GLt+ e++ r+kk G Nel   +k++++  +++ f+ p++++++ a+l+
       KHJ33709.1  70 EWLQTDWKLGLTTTEVEIRRKKIGFNEL-TTEKENMFLTFVSYFRGPILYVMELAVLL 126
                      5689999*********************.99999*********************998 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.1e-05     0.038     196     242 ..     648     694 ..     644     698 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.1e-05
                  HHHCT--GGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEE CS
  Hydrolase_3 196 akelnisleeviafGDgeNDieMLeaaglgvAmgnaseevkkaAdyv 242
                  +++l+     ++  GDg ND + L++++ g+A++ a+e +++a+d v
   KHJ33709.1 648 VEMLQQRGHLTAMTGDGVNDAPSLKKSDCGIAVEGATEAAQAASDIV 694
                  56666666778899*****************************9988 PP

>> FixP_N  N-terminal domain of cytochrome oxidase-cbb3, FixP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.4    0.0052        19      12      40 ..     774     802 ..     766     804 .. 0.83
   2 ?    4.8   1.1    0.0068        24      23      40 ..     902     919 ..     900     921 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0052
      FixP_N  12 IrElnnplPrWWlylFyativfavvYlil 40 
                 Ir    +lP+ W++  +++i++a++ ++l
  KHJ33709.1 774 IRPVEWQLPKIWIISVVLGILLALGTWVL 802
                 6666779****************998875 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0068
      FixP_N  23 WlylFyativfavvYlil 40 
                 W y   +tiv+a+vY +l
  KHJ33709.1 902 WGYSIAVTIVIAIVYHVL 919
                 9999***********886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (977 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       799  (0.0445647); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.41
# Mc/sec: 7098.69
//
Query:       KHJ33710.1  [L=168]
Description: hypothetical protein EV44_g3466 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.079   12.5   0.4        0.3   10.7   0.1    1.9  2  DUF1071   Protein of unknown function (DUF1071)


Domain annotation for each model (and alignments):
>> DUF1071  Protein of unknown function (DUF1071)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   1.7e-05       0.3     116     144 ..       8      37 ..       3      41 .. 0.86
   2 ?   -0.8   0.0     0.056     1e+03       3      21 ..     144     162 ..     129     165 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 1.7e-05
     DUF1071 116 yiyaGedlP.eedkPkkqlkkaeliekale 144
                  i+ Ged+P  ++kP++q+++ e+i+++++
  KHJ33710.1   8 MIFDGEDIPiRNNKPNSQTSDDENIDNETK 37 
                 59*******5569**********9998766 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.056
     DUF1071   3 fekLasidvsdkvekknel 21 
                 +++L   dv +kv++ n++
  KHJ33710.1 144 YNALIAKDVIKKVKHTNNM 162
                 6778888888888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       948  (0.0528752); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1228.39
//
Query:       KHJ33711.1  [L=319]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       848  (0.0472977); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2308.05
//
Query:       KHJ33712.1  [L=259]
Description: hypothetical protein EV44_g3389 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-25   89.1   0.7      2e-23   83.3   0.7    2.0  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
       0.11   11.9   0.0        0.2   11.1   0.0    1.3  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.3   0.7   2.3e-27     2e-23      10     211 ..      54     237 ..      45     252 .. 0.89

  Alignments for each domain:
  == domain 1  score: 83.3 bits;  conditional E-value: 2.3e-27
       RVT_2  10 kdrkaigsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaaeeelvvhqldvdsafLnaeldeevyvkqPpGfeidre 108
                 ++ ++i+ + vft k dd    kykarlv++G  q++ e+  +++a  + +   r+ la+a+              ++n e d+ev +  P Gf+  ++
  KHJ33712.1  54 NKTRPIPIKRVFTYKFDDDFFRKYKARLVIRGDLQIPTEK--DTYAAKLAVRLYRVALAIAS--------------YFNLEFDDEVLIHYPEGFKKPGR 136
                 5689*********************************995..78887776666777777764..............8999******************* PP

       RVT_2 109 eekvykLnkslyGlkqapllWnekidkvLkklgferseaesGlyvrgtgegklivalyvddllia..gsdikiledvkkelakkfklkdlgkvskfLGi 205
                   +v k  k+lyGl  +p+lW++ ++k+L+klg++  ++   +++      kli   yvdd+++    s+ ++++++k++l + + +++lg+++ fLG+
  KHJ33712.1 137 LLRVLKALKALYGLSVSPRLWYNYLSKTLEKLGLKYVPGSGYIFTNE----KLIDYFYVDDIVLFyhMSHREVFQELKNTLLEVYTIRYLGELKWFLGL 231
                 **************************************988888766....9*********998522677899************************** PP

       RVT_2 206 eiaqea 211
                  i+++ 
  KHJ33712.1 232 RIIRDR 237
                 **9875 PP

>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   2.3e-05       0.2     135     187 ..     149     213 ..     143     219 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.3e-05
                 T-TTHHHHHHHHHHHHHTT-T................TEEECTTEEEEEESSHHH..HHHHHHHH CS
       RVT_1 135 GsvlSPllfnlfmnellrelrkra..........kgvtllrYaDDililskskee..lqelleav 187
                 G+ +SP l+  ++++ l++l  ++          +++  + Y+DDi++++   ++  +qel +++
  KHJ33712.1 149 GLSVSPRLWYNYLSKTLEKLGLKYvpgsgyiftnEKLIDYFYVDDIVLFYHMSHRevFQELKNTL 213
                 999******************999*********999999**********9884333455554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 1979.20
//
Query:       KHJ33713.1  [L=913]
Description: putative wd repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-53  180.6   0.0    6.1e-53  179.2   0.0    1.8  1  DUF3337   Domain of unknown function (DUF3337)
    1.4e-18   66.9  12.8    0.00025   21.8   0.3    6.9  6  WD40      WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.021   13.5   1.5      0.034   12.8   0.4    1.8  2  Nup160    Nucleoporin Nup120/160
       0.21   10.5   1.0        1.5    7.7   0.3    2.3  3  Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping prot


Domain annotation for each model (and alignments):
>> DUF3337  Domain of unknown function (DUF3337)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.2   0.0   1.4e-56   6.1e-53       2     171 ..     759     911 ..     758     912 .. 0.94

  Alignments for each domain:
  == domain 1  score: 179.2 bits;  conditional E-value: 1.4e-56
     DUF3337   2 PkdtliiiseespesgnvrdlyrgtvgdlgedvdlleevlPsWllevllenkipikesvkisFvLlplpssklkedklpelek..knsrLtanrmLrvr 98 
                 P+ t+iii+ee  +sg+  dlyrgtv ++g+d++++e+ +P Wl+e+ll+nkip k+++k+sFvL+p+      ++ lp+++   +n+rL+anrmLrv+
  KHJ33713.1 759 PPLTTIIIQEE--TSGGCVDLYRGTVASVGKDMQMIEKRAPLWLGELLLKNKIPNKDPIKVSFVLQPW------KNLLPSIAGpdGNIRLNANRMLRVK 849
                 999********..9******************************************************......4579**9998899************ PP

     DUF3337  99 KileyvaeklekktkeskasseeeekeeedkklkpeeklellCndqvlpptmtLatvktfiWkssgDlvlhYr 171
                 Kil+y+ae++e+  +             +++++kpee+l+l+C dq lp++mtLat++t+iWk ++D+ l+Y+
  KHJ33713.1 850 KILAYIAERIESIPEIP-----------NASSMKPEEYLDLYCYDQKLPISMTLATLRTYIWKGGADVMLYYK 911
                 ***********543332...........2467****************************************8 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.1    0.0001      0.46       8      38 .]      21      52 ..      12      52 .. 0.90
   2 !    7.3   0.1    0.0021       9.5       8      37 ..      84     114 ..      77     115 .. 0.82
   3 !   17.4   0.0   1.3e-06    0.0058       9      38 .]     129     160 ..     122     160 .. 0.82
   4 !    8.7   0.0   0.00074       3.3      13      38 .]     183     206 ..     177     206 .. 0.84
   5 !   21.8   0.3   5.6e-08   0.00025       4      38 .]     213     248 ..     210     248 .. 0.88
   6 ?    2.9   0.1      0.05   2.2e+02       2      23 ..     253     274 ..     252     286 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0001
                ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38
                 GH  +v++la++++ + l sG++Dg +  W+
  KHJ33713.1 21 GGHrLGVNGLAVDSERSILYSGGRDGLICAWN 52
                499777***********************998 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0021
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 ++H  +v+++    +++ l+s+s D t++ W
  KHJ33713.1  84 EAHtHWVNDIILAFNNTVLVSASSDLTIKAW 114
                 4673369999999999***99988*****99 PP

  == domain 3  score: 17.4 bits;  conditional E-value: 1.3e-06
                 SSSS.EEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40   9 GHss.vtsla.fspdgawlasGsdDgtvriWd 38 
                  Hs+   +la   p ++w+asG+ D+++ iWd
  KHJ33713.1 129 QHSDyAKCLAaPGPQSNWVASGGLDRKICIWD 160
                 5644467888899******************9 PP

  == domain 4  score: 8.7 bits;  conditional E-value: 0.00074
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 +++l    +++ +asG+ D  vr+Wd
  KHJ33713.1 183 IYAL--AANQDIIASGGPDSIVRLWD 206
                 5555..678899*************9 PP

  == domain 5  score: 21.8 bits;  conditional E-value: 5.6e-08
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++++ GH ++++++  + +g+ ++++s D+t+++W+
  KHJ33713.1 213 VTKFVGHtDNIRDILINGSGDTIMTASSDQTIKVWN 248
                 67899**766*************99977*******8 PP

  == domain 6  score: 2.9 bits;  conditional E-value: 0.05
                 EEEEEEESS.SSEEEEEEETTSS CS
        WD40   2 qclrtltGH.ssvtslafspdga 23 
                 +c++tlt H  sv+sl  s+d+ 
  KHJ33713.1 253 RCMYTLTMHnESVWSL-HSDDSE 274
                 79*******777****.444444 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.22   9.8e+02     216     245 ..      84     114 ..      75     132 .. 0.80
   2 ?   12.8   0.4   7.5e-06     0.034     231     278 ..     233     274 ..     219     292 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.22
                 ECEEEEET......TTTEEEEEETT-EEEEE CS
      Nup160 216 alsldvavavvei.gqtylfalsrdgkLrvW 245
                 ++ ++ +++++ + ++t+l+++s+d ++++W
  KHJ33713.1  84 EAHTHWVNDIILAfNNTVLVSASSDLTIKAW 114
                 4556666677766899*************** PP

  == domain 2  score: 12.8 bits;  conditional E-value: 7.5e-06
                 TEEEEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESEEES CS
      Nup160 231 tylfalsrdgkLrvWnlltgkclatidllrdeeaqdessskstldpae 278
                 ++++++s+d++++vWn++  +c++t ++       +es+  +++d++e
  KHJ33713.1 233 DTIMTASSDQTIKVWNVTACRCMYTLTMH------NESVWSLHSDDSE 274
                 789**********************9999......3444444444444 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.64   2.9e+03     184     214 ..      83     114 ..      63     125 .. 0.79
   2 ?    7.7   0.3   0.00034       1.5     230     289 ..     205     264 ..     197     290 .. 0.72
   3 ?    0.1   0.0     0.067     3e+02     198     241 ..     301     347 ..     295     349 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.64
    Ge1_WD40 184 ieehs.liveaafspdGtalatasedGevkff 214
                 +e h+  + + +++ + t+l  as+d ++k +
  KHJ33713.1  83 VEAHThWVNDIILAFNNTVLVSASSDLTIKAW 114
                 55665467788888889999999999888877 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00034
    Ge1_WD40 230 WkPhdGkslssll.fldnhkeesdeqfWrfaitgadnnselklWscelWtClqtikfapsi 289
                 W P  G  ++ ++   dn+++    +    +i +a+ ++ +k+W++ + +C+ t+ ++ + 
  KHJ33713.1 205 WDPRSGSRVTKFVgHTDNIRDIL-INGSGDTIMTASSDQTIKVWNVTACRCMYTLTMHNES 264
                 77777777777663456666654.333445788899999***************9988763 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.067
    Ge1_WD40 198 dGtalatase.dGevkffqv..yledeeeprCLheWkPhdGkslssl 241
                 dG +la+a e dG+ k      y+  +++  C+ +W   d  s+ sl
  KHJ33713.1 301 DGITLAIAQEnDGVNKVIACedYIWTATSSSCINRWANVDTASIKSL 347
                 9******97539988876544499999*********99999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (913 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.66u 0.25s 00:00:00.91 Elapsed: 00:00:00.40
# Mc/sec: 6808.05
//
Query:       KHJ33714.1  [L=1006]
Description: putative leucine carboxyl methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-36  125.3   0.0    4.8e-36  124.8   0.0    1.2  1  Cupin_8   Cupin-like domain
    1.2e-19   71.0   0.0    2.1e-19   70.2   0.0    1.4  1  LCM       Leucine carboxyl methyltransferase
    5.1e-11   42.4   4.8    0.00056   19.9   0.1    5.2  5  Kelch_4   Galactose oxidase, central domain
    0.00015   21.7   1.8       0.17   11.9   0.0    4.7  4  Kelch_5   Kelch motif
    0.00023   20.7   0.0    0.00041   19.9   0.0    1.3  1  Cupin_4   Cupin superfamily protein
     0.0023   18.2   3.0     0.0035   17.6   0.1    2.9  2  Kelch_3   Galactose oxidase, central domain
       0.01   15.4   2.7        1.9    8.1   0.0    3.9  4  Kelch_1   Kelch motif
  ------ inclusion threshold ------
      0.018   15.3   0.9          8    6.9   0.2    3.8  4  Kelch_6   Kelch motif
      0.072   12.4   0.0       0.75    9.0   0.0    2.1  2  GPI       Glucose-6-phosphate isomerase (GPI)
      0.081   13.4   0.0       0.21   12.0   0.0    1.7  1  JmjC      JmjC domain, hydroxylase


Domain annotation for each model (and alignments):
>> Cupin_8  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.8   0.0   2.7e-39   4.8e-36       5     250 ..     718     944 ..     714     948 .. 0.86

  Alignments for each domain:
  == domain 1  score: 124.8 bits;  conditional E-value: 2.7e-39
     Cupin_8   5 freyvakskPviikgalkdwpalqkwtddeylleylkek.aedvkvsvektpdgeadsfkeneelkfvkpeeeemtfkdfldelearrdtrsepyayl. 101
                 f e++  +kP i++g+ + ++++ kw+      eylk++  ed+ +++++          e +++++++++++ m+f++f+++++++  + + +++++ 
  KHJ33714.1 718 FFEILNAEKPAIFEGL-DIGSCTAKWNP-----EYLKKNiGEDRDLTIHQAS-------TEYMDFNSKNFNYTSMKFGEFISQIDKGA-KLYLRSLSSd 802
                 5689999********9.78********7.....9999995567888886665.......334678899******************96.6667777777 PP

     Cupin_8 102 ....qnanlasefpelkedsdlpfateafgkkpeavnlWlGnsasvsslHkDhyeNlycvvrGrKkftLfpPsdapflyeaslsptedgtvvssvdve. 195
                       a+l+++fp++ +d+ lp   ++++++ ++  l+++    +++lH+D   N++c+++G+K+++Lf+Ps+ +++ +++      g+++ss++v  
  KHJ33714.1 803 npaqLPADLSKDFPRICSDFCLPEELSFVKQNSHSSPLRISG-PVIMWLHYDTLANVLCQIQGEKEILLFHPSEFKYFDIKP------GKSSSSINVFe 894
                 777568999********************************9.9**************************************......88999999873 PP

     Cupin_8 196 ...epdlekfprlkdakkalevtlnaGevLylPalWfHeVkslaeeplhlavnywydm 250
                    ++d ++fp      +++e+ l++G+v+y+P +W+H  +s   +++++avn+++++
  KHJ33714.1 895 sirRLDHKRFP------RPYEALLKPGDVIYIPPFWLHTLSSK--KGISVAVNVFFKN 944
                 33344444444......79999*******************99..99*********87 PP

>> LCM  Leucine carboxyl methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.2   0.0   1.2e-22   2.1e-19      17     187 ..      12     205 ..       2     206 .. 0.88

  Alignments for each domain:
  == domain 1  score: 70.2 bits;  conditional E-value: 1.2e-22
                 HTSSHTCCCCCCCHHHHHHHHCHCCCHCHHCHG.CHCCCCT--HHHHHHHHHHHHHHHHHHHHHH.HCTT.ESEEEEET-TT--HHHHHHHTT.....T CS
         LCM  17 dglidDplaeslvsaaglellerkadkelekek.eeekkekkapelnrgiavRtrffddllkaal.saag.irqvViLGAGlDtrayRlpwla.....g 107
                 +  i D+++ s+vs++++e    +  +e+++++ +++k +++ p +nrg+++R +++d+++ ++l +++   + v++LG+G+D+++++  +       +
  KHJ33714.1  12 QDFIIDTNNNSIVSKRSVER--LYFLDEPHYFRyFVKKPKRRNPLINRGYWLRIKAIDHIVCKFLsQNSSkRKIVINLGCGYDPLPWQCFSKYpdvckK 108
                 567889**********9996..666677888888899999*************************755553556778***********98877889999 PP

                 EEEEEEE-HHHHHHHHHHHHHSHHHHH..............EECSE..EE--TTS.HHHHHHHHHHTT-TTSEEEEEEESSGGGS-HHHHHHHHHHH CS
         LCM 108 lkvfEvDqpevlefKretlkelgaepk..............aelry..vpvDlrd.ddwpeaLaaagfdpekptawvaeGvlvYLtpeasdalleai 187
                   ++++D+ +++ +Kr+++++ + +++               + +y  v++Dl +  ++++ L +   +++   +++ae+ + Y++++a+d+l+++ 
  KHJ33714.1 109 AIFIDIDFRDLILRKRKLVQDVPDLNSdltnietsdefvllRSDQYlqVGCDLSNiAQLNDILSDIVDEADSSILFIAEVSITYMEADAADKLIRWA 205
                 99*********************9999********9999984444457*******9*********9888999**********************985 PP

>> Kelch_4  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0025       4.4      12      29 ..     372     388 ..     358     394 .. 0.86
   2 !   19.9   0.1   3.1e-07   0.00056       2      48 ..     414     460 ..     413     460 .. 0.87
   3 !    5.9   0.0    0.0072        13      14      38 ..     531     555 ..     526     558 .. 0.90
   4 !    6.2   0.1    0.0059        11       7      24 ..     580     597 ..     576     602 .. 0.69
   5 ?   -0.7   0.2      0.83   1.5e+03       6      21 ..     637     651 ..     634     653 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0025
     Kelch_4  12 dgtiylfGGrgedgtlln 29 
                 +++i++fGG g+  t+ln
  KHJ33714.1 372 RDRIAVFGGLGTS-TRLN 388
                 49**********9.8998 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 3.1e-07
     Kelch_4   2 RaghsatsipdgtiylfGGrgedgtllndlylldlstntWrrlgslP 48 
                 R++h++t ++d   +l+GGr ++g  l d++++      W+r+ +lP
  KHJ33714.1 414 RMCHTITDLGDMGAILVGGRKSPGVGLHDCWIYHKFLDIWERVDDLP 460
                 9**********9********************976666677666665 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0072
     Kelch_4  14 tiylfGGrgedgtllndlylldlst 38 
                 + +l GG + +g ++n ++++ l++
  KHJ33714.1 531 SGILAGGMNLEGVVMNKVWRWELKD 555
                 5789*****************9986 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.0059
     Kelch_4   7 atsipdgtiylfGGrged 24 
                 +t++  g+iylfGG+  +
  KHJ33714.1 580 CTVTHLGRIYLFGGIIKN 597
                 4444338*******9877 PP

  == domain 5  score: -0.7 bits;  conditional E-value: 0.83
     Kelch_4   6 satsipdgtiylfGGr 21 
                 s++si+  +i++ GG 
  KHJ33714.1 637 SIVSID-ENIVVMGGS 651
                 899**5.688888886 PP

>> Kelch_5  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.26   4.7e+02       2      37 ..     411     446 ..     410     448 .. 0.81
   2 ?    2.7   0.0     0.073   1.3e+02      19      40 ..     534     554 ..     533     555 .. 0.88
   3 !   11.9   0.0   9.7e-05      0.17       5      24 ..     576     595 ..     574     605 .. 0.89
   4 ?    0.1   0.2      0.48   8.7e+02      10      24 ..     638     652 ..     633     661 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.26
     Kelch_5   2 PppRaghcavtvsek.iYvyGGkvgrdgsvsddvyvL 37 
                 P++R++h +  +++   ++ GG+++  g +  d +++
  KHJ33714.1 411 PSSRMCHTITDLGDMgAILVGGRKS-PGVGLHDCWIY 446
                 7888888887777777889999997.89999999998 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.073
     Kelch_5  19 vyGGkvgrdgsvsddvyvLdlp 40 
                 + GG++  +g v ++v+++ l+
  KHJ33714.1 534 LAGGMNL-EGVVMNKVWRWELK 554
                 78****9.99999*****9886 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 9.7e-05
     Kelch_5   5 RaghcavtvsekiYvyGGkv 24 
                 R+g+c+vt+ + iY++GG++
  KHJ33714.1 576 RFGACTVTHLGRIYLFGGII 595
                 89****************98 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.48
     Kelch_5  10 avtvsekiYvyGGkv 24 
                 +v  +e+i v+GG +
  KHJ33714.1 638 IVSIDENIVVMGGST 652
                 55568********75 PP

>> Cupin_4  Cupin superfamily protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   2.3e-07   0.00041     131     212 ..     851     943 ..     828     976 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 2.3e-07
                 EE-SSEEEEEEEEC-EEEEEE-..........SCCCTTSSSEE--TTCCG--..S-SEEEEE-TT-EEEE-TT-EEEEEBBT-CCEEEEEECCE CS
     Cupin_4 131 HyDdyDVfllQleGrkrWrvyk..........ptvpelelkseeplkildef..epvedfvLepGDlLYlPrgviHqgvaedesltlSvglrap 212
                 HyD    +l Q++G+k   + +          p + +++ +  e++++ld++      +  L+pGD++Y+P+ + H  ++++ +++++v ++ +
  KHJ33714.1 851 HYDTLANVLCQIQGEKEILLFHpsefkyfdikPGKSSSSINVFESIRRLDHKrfPRPYEALLKPGDVIYIPPFWLHTLSSKK-GISVAVNVFFK 943
                 888888888888888887777777788887766666777777788888887654445699****************999987.88888876655 PP

>> Kelch_3  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.1   1.9e-06    0.0035       2      47 ..     373     420 ..     372     421 .. 0.84
   2 ?   -1.8   0.5       2.4   4.2e+03       3       9 ..     587     593 ..     586     594 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 1.9e-06
     Kelch_3   2 drlyifGGlgddgqdrlndvyvydl.dtntWaei...aslppaRaghaat 47 
                 dr+ +fGGlg  + +rln+ ++y+  d + + +    + +p+ R++h++t
  KHJ33714.1 373 DRIAVFGGLG--TSTRLNSRDEYSSiDQDIIGTNycsSASPSSRMCHTIT 420
                 89********..***********66376655544688999********98 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2.4
     Kelch_3   3 rlyifGG 9  
                 r+y+fGG
  KHJ33714.1 587 RIYLFGG 593
                 79***** PP

>> Kelch_1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0       0.2   3.7e+02      17      41 ..     430     455 ..     428     460 .. 0.79
   2 ?   -3.1   0.0       3.5   6.2e+03      18      32 ..     536     551 ..     534     554 .. 0.77
   3 !    8.1   0.0    0.0011       1.9       2      22 ..     576     596 ..     575     605 .. 0.87
   4 ?    3.4   0.2     0.032        57       6      21 ..     637     652 ..     634     662 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.2
                 EEEBCS.SSBEEEEEEEETTTTEEEE CS
     Kelch_1  17 iGGsdg.gnalssvevyDpetntWre 41 
                 +GG+ + g  l+++++y    + W++
  KHJ33714.1 430 VGGRKSpGVGLHDCWIYHKFLDIWER 455
                 899999***********765566655 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 3.5
                 EEBCS.SSBEEEEEEE CS
     Kelch_1  18 GGsdg.gnalssvevy 32 
                 GG++  g  ++ v+++
  KHJ33714.1 536 GGMNLeGVVMNKVWRW 551
                 6666688999999997 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.0011
                 BBSEEEEEETTEEEEEEEBCS CS
     Kelch_1   2 ragagavvvggkiYviGGsdg 22 
                 r ga+ v++ g+iY +GG   
  KHJ33714.1 576 RFGACTVTHLGRIYLFGGIIK 596
                 8899**************976 PP

  == domain 4  score: 3.4 bits;  conditional E-value: 0.032
                 EEEEETTEEEEEEEBC CS
     Kelch_1   6 gavvvggkiYviGGsd 21 
                 + v++++ i v+GGs 
  KHJ33714.1 637 SIVSIDENIVVMGGST 652
                 789***********96 PP

>> Kelch_6  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.99   1.8e+03      12      28 ..     373     388 ..     368     394 .. 0.82
   2 ?   -3.5   0.0       8.7   1.6e+04      24      35 ..     542     553 ..     534     555 .. 0.67
   3 ?    3.4   0.0     0.058     1e+02       4      22 ..     578     596 ..     575     613 .. 0.72
   4 ?    6.9   0.2    0.0045         8       5      21 ..     636     652 ..     633     656 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.99
     Kelch_6  12 gkiYifGGytdsspyln 28 
                 ++i +fGG++  s++ln
  KHJ33714.1 373 DRIAVFGGLGT-STRLN 388
                 7899*****99.56655 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 8.7
     Kelch_6  24 spylnkvwvydp 35 
                 +   nkvw++ +
  KHJ33714.1 542 GVVMNKVWRWEL 553
                 556799999865 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.058
     Kelch_6   4 ghslvsvggkiYifGGytd 22 
                 g  +v++ g+iY+fGG   
  KHJ33714.1 578 GACTVTHLGRIYLFGGIIK 596
                 444566669*******755 PP

  == domain 4  score: 6.9 bits;  conditional E-value: 0.0045
     Kelch_6   5 hslvsvggkiYifGGyt 21 
                  s+vs+++ i+++GG+t
  KHJ33714.1 636 ISIVSIDENIVVMGGST 652
                 699************98 PP

>> GPI  Glucose-6-phosphate isomerase (GPI)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.17   3.1e+02     124     149 ..     462     487 ..     459     507 .. 0.85
   2 ?    9.0   0.0   0.00042      0.75     115     163 ..     913     960 ..     909     975 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.17
         GPI 124 PnygHvsinigeedLvmanlvpkdag 149
                 P y H si ig + ++++   + ++g
  KHJ33714.1 462 PLYRHQSIRIGSNSVLVSIGRVDNCG 487
                 99**********99999888888887 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00042
         GPI 115 kartvvivPPnygHvsinigeedLvmanlvpkdagqdYdviakarGmaa 163
                 k ++v+++PP++ H ++   ++  v  n+  k+ ++ Y   +   G + 
  KHJ33714.1 913 KPGDVIYIPPFWLH-TLSSKKGISVAVNVFFKNLSKGYTNGKDVYGNRD 960
                 6789**********.5677777788999999999999977666666654 PP

>> JmjC  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00012      0.21      79     114 .]     906     940 ..     874     940 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00012
                 --EEEEE-TT-EEEE-TT-EEEEEESSSEEEEEEEE CS
        JmjC  79 pvyrfvqkpgefVfvfpgayHsvfnlgfniaeavnf 114
                 ++y+   kpg++++++p + H+ ++ +  i++avn+
  KHJ33714.1 906 RPYEALLKPGDVIYIPPFWLHT-LSSKKGISVAVNV 940
                 48999****************6.6777888888885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1006 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.70u 0.24s 00:00:00.94 Elapsed: 00:00:00.39
# Mc/sec: 7715.77
//
Query:       KHJ33715.1  [L=599]
Description: putative pp-loop family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      9e-44  149.4   0.0    2.9e-43  147.7   0.0    1.8  1  ATP_bind_3    PP-loop family
  ------ inclusion threshold ------
      0.014   14.6   0.0      0.026   13.6   0.0    1.4  1  NAD_synthase  NAD synthase
      0.095   12.6   0.0       0.41   10.5   0.0    2.0  2  DUF4452       Domain of unknown function (DUF4452)


Domain annotation for each model (and alignments):
>> ATP_bind_3  PP-loop family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.7   0.0   4.8e-47   2.9e-43       2     181 ..      55     298 ..      54     299 .. 0.95

  Alignments for each domain:
  == domain 1  score: 147.7 bits;  conditional E-value: 4.8e-47
                 EEEE--SCHHHHHHHHHHHHHCTTTTT.....EEEEEEEE-SSSTCHHHHHHHHHHHHHHTT-EEEEEE--H...HHCTTSTCCCHHHHHHHHHHHHCH CS
  ATP_bind_3   2 vlvAvSgGlDSmaLllllaklkkklgi.....klvaihvdhglreeskeeaelvkelckklnikleiekvdv...akkkgknleeaARelRYevlkeal 92 
                 + +A+SgG+DSmaL  l  +l+  +       k+  + +dhg+re s++ea  v+++ ++ +i+  i k+++   + +   n+e  AR++RY++l +a+
  KHJ33715.1  55 MGLAISGGVDSMALAFLCSNLQLYELPnyrrlKFHGFIIDHGVREGSEREALSVAKILANRGIPASIWKIKWqvrHPHLLPNFESLARKHRYRLLGKAC 153
                 569***********9999888654433667779***************************************776455699****************** PP

                 HCCT.CEEE---BHHHHHHHHHHHHCCT--CCHHH-S-SEEEE.......................................................T CS
  ATP_bind_3  93 kkegievlllAhhadDqaEtfllrlargsglaglagikeasei.......................................................a 136
                  +++i+ l+l+hh+dDqaE +++r++ g+  +gl+g+k++s i                                                        
  KHJ33715.1 154 FENKIDSLILGHHEDDQAELIMMRIIAGHRGRGLMGMKSRSAIpecygiygvhesgggmigsdincqysppisksilkissnqawqqnqnkvklleetG 252
                 *****************************************99*****************************************************988 PP

                 TCCEE-CCCT--HHHHHHHHHHTT---B--CGGGCTTSH.HHHHHH CS
  ATP_bind_3 137 sirlvRPlLkvskeeleeylkekkikwveDesNadekye.RnriRk 181
                 +i+++RPlL++sk+ l ++++  +i+w+eD+sN++ k++ Rn iR+
  KHJ33715.1 253 GIQIYRPLLNISKTRLVSTCEAYQIPWFEDKSNHNAKFTqRNTIRH 298
                 8*************************************99*****8 PP

>> NAD_synthase  NAD synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   4.4e-06     0.026      17     127 ..      51     165 ..      44     175 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.4e-06
                   TTSEEEEEE-SSHHHHHHHHHHHHHH.......TCGEEEEEE--SSSTTHHHHHHHHHHHHHHTSEEEE---HHHHHHHHH.HHHHHH-HHHHHHHH CS
  NAD_synthase  17 gakgvvlGlSGGvDSslvaalavkal.......gkenvlalllPssvsseedvedalalaenlgievktidikpivrafeq.elkeakedlakgNlk 105
                   + k++ l +SGGvDS   a l+ ++         + ++++ ++  +   e + ++al +a+ l  +    +i +i   +++ +l ++ e la    k
    KHJ33715.1  51 QQKKMGLAISGGVDSMALAFLCSNLQlyelpnyRRLKFHGFIID-HGVREGSEREALSVAKILANRGIPASIWKIKWQVRHpHLLPNFESLA---RK 143
                   56788899***************9878999999999*******5.45566777888888888887777777777665555545555555555...47 PP

                   HHHHHHHHHHHHHHHTEEEB-- CS
  NAD_synthase 106 aRiRmailyaianklnllvlgT 127
                    R R   +  + nk ++l+lg 
    KHJ33715.1 144 HRYRLLGKACFENKIDSLILGH 165
                   7888888888888888888885 PP

>> DUF4452  Domain of unknown function (DUF4452)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.35   2.1e+03     105     135 ..     266     297 ..     229     307 .. 0.73
   2 ?   10.5   0.0   6.9e-05      0.41     112     159 ..     356     403 ..     344     410 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.35
     DUF4452 105 lslssassay.ipasyqsqaselklhqPsatR 135
                   l s+ +ay ip   ++++++ k+ q  ++R
  KHJ33715.1 266 TRLVSTCEAYqIPWFEDKSNHNAKFTQRNTIR 297
                 45667777885555666667788888877776 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 6.9e-05
     DUF4452 112 sayipasyqsqaselklhqPsatRtrnaiPivnPstgisvssPpssvs 159
                 + +i+ +   +++ l+l q +a   r++i +v P++++++ss ++sv+
  KHJ33715.1 356 PNFINEKRLADSEYLRLFQIAAEILRKVISLVTPQEHVELSSLQTSVT 403
                 56766666666789*******************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (599 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.20s 00:00:00.75 Elapsed: 00:00:00.36
# Mc/sec: 5016.17
//
Query:       KHJ33716.1  [L=506]
Description: putative u4 u6 small nuclear ribonucleoprotein prp3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-73  246.8   3.7    3.2e-73  246.2   3.7    1.3  1  PRP3      pre-mRNA processing factor 3 (PRP3)
    3.4e-49  166.7   0.7    6.4e-49  165.8   0.7    1.5  1  DUF1115   Protein of unknown function (DUF1115)


Domain annotation for each model (and alignments):
>> PRP3  pre-mRNA processing factor 3 (PRP3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  246.2   3.7   3.6e-77   3.2e-73       1     223 []     123     338 ..     123     338 .. 0.91

  Alignments for each domain:
  == domain 1  score: 246.2 bits;  conditional E-value: 3.6e-77
        PRP3   1 npyldprlka...kvkkrkkralkfvekGkfikqaeqlrekaqleelkkeiaeeakkaglesdlklaekapkkeedevpndvEWWDavllkkkekkeal 96 
                 npy+d ++     ++k+r+ ++l f++kGk+i+qa++lr++a+le++kk+iae+++k g+++dl+++ k++     e+p+d+EWWD+ l+  k  +++ 
  KHJ33716.1 123 NPYFDMSFGGqtaTAKNRHAKQLIFNQKGKYIQQANALRRQAALEAMKKRIAESSRKIGIDEDLDTE-KNYIV---EAPPDIEWWDEGLVDGK--SYDC 215
                 89***88884466678899*********************************************965.88888...7788********99766..4555 PP

        PRP3  97 keeekkkekeeeeesklkkitnyveHPvplkppkektkpaakplyLTkkErKklRrqrRkekekekqdkirlGLepppepKvklsNLmrvlgdeavqdP 195
                  e++ +  k ++ +s    it y++HPv l+pp+ek++pa+kp++LT kE+ klRrqrR+++ ke+q+kirlGLep+p+pKvk  NLmrvlg+eav+dP
  KHJ33716.1 216 IENQ-NLLKIDTLDS---IITAYIQHPVLLEPPQEKNTPAPKPMFLTSKEQAKLRRQRRMADLKEQQAKIRLGLEPAPPPKVKKGNLMRVLGEEAVKDP 310
                 4333.3334555554...9******************************************************************************** PP

        PRP3 196 tkvEaeVreqmaeRekkHeerNeeRklt 223
                 t+vEa+V++++a+R ++H+e+Ne+Rklt
  KHJ33716.1 311 TAVEARVNREIAARYQAHLEMNEKRKLT 338
                 **************************98 PP

>> DUF1115  Protein of unknown function (DUF1115)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.8   0.7   7.1e-53   6.4e-49       2     146 .]     362     502 ..     361     502 .. 0.93

  Alignments for each domain:
  == domain 1  score: 165.8 bits;  conditional E-value: 7.1e-53
     DUF1115   2 vfriksLsnpkhrfkvdknAkqlsltGvvllgpkfnlvvveGgekaikkYkklmlrrikWteeer.edeeeeeekeaakekkeeeekdedekeeekdls 99 
                 vf+i+sL+n++hrfk+ knA+q++ltG+++++p+f+lvvveGge++i++Y+klml+r++Wte+++ +      ++ + +e+ +++ k+edek+e kdl+
  KHJ33716.1 362 VFKINSLANGSHRFKIAKNAEQNALTGICIMHPRFSLVVVEGGEHSIRQYRKLMLQRVNWTENSPtRI-----KEGTSAEALQDWLKAEDEKGELKDLA 455
                 9*************************************************************993222.....2233467899**************** PP

     DUF1115 100 nnkcelvweGevkkrnFkkwkfkeceteeearevLekkgvehywdla 146
                  nkc lv+eGevk r+F+kw  k+cet+++ar vL+++++e++w la
  KHJ33716.1 456 TNKCILVFEGEVKARAFRKWGTKVCETDSAARLVLQRSKMENFWALA 502
                 ********************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       995  (0.0554967); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.37
# Mc/sec: 4149.37
//
Query:       KHJ33717.1  [L=1091]
Description: putative ddhd domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-24   86.3   6.4    4.8e-23   82.5   0.0    3.3  2  DDHD      DDHD domain


Domain annotation for each model (and alignments):
>> DDHD  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   1.8      0.32   5.7e+03      88     162 ..      78     154 ..      50     217 .. 0.57
   2 !   82.5   0.0   2.7e-27   4.8e-23       1     219 [.     864    1064 ..     864    1067 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.32
        DDHD  88 lelkesltsigaalkqkvsglvsslsa..llnrslelaeeesaslaessksherasesskasqeskaaesstasssa 162
                 +++++s+ +ig+++++  ++l s+  +    +++ +++e++++ + +++  +er++++ ++    ++++++++ s++
  KHJ33717.1  78 SNYDKSFPEIGQDSTSTIHDLYSNSWGneSARNFEHMSENDETGELDEDIGTERNKDNMIHAYLADQTRHYKSFSNT 154
                 45555555666665555555555443223344445555555555555555555555544444443333333333332 PP

  == domain 2  score: 82.5 bits;  conditional E-value: 2.7e-27
        DDHD    1 ldFevedfFllGSPlGlflalrglera.............ktvkpaldvaqlkrpacqqlyNiFhpaDPvAyRlEPLlepkf.sklkPvsiprykrr 83  
                  +dF+++++F  GSP G+fl+l++++ +             ++++ + +  ++ ++a +++yN+ h +DP+AyRl++ +++k+ ++lk  ++p++   
  KHJ33717.1  864 FDFKTTNCFFAGSPAGFFLLLEQAKLSprrgsckpdaenfNDKIVTDEAGTFGCMALDNIYNVMHYNDPIAYRLNATVDRKYaESLKEAQLPTTSV- 959 
                  8*********************8885577899999998886677777799********************************999********999. PP

        DDHD   84 kllhlelkesltsigaalkqkvsglvsslsallnrslelaeeesaslaessksherasesskasqeskaaesstasssaksskaeekvelekvraln 180 
                  +l+         sig+a+++ + g++ +          l+++e++ +  ++++   + e + ++ +        +++          +  +k++ ln
  KHJ33717.1  960 GLF--------GSIGRAMRSITPGIIPTQ-------DILEDSEEPMNPLNTAHLPLNMEMEVHDFN--------REK----------IAEKKFNLLN 1023
                  544........344444444333333332.......113333333332222222222222222111........112..........22235789** PP

        DDHD  181 wwgRiDYaLq..egaleaeylsavasHasYWeseDvalFll 219 
                  ++g+iD+ ++   g+le++y++++ +H sYW + D++ +++
  KHJ33717.1 1024 DNGQIDWYMNsgRGPLEIQYINMLGAHSSYWMNSDFVRLVV 1064
                  *********988889**********************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1091 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       385  (0.0214736); expected 358.6 (0.02)
Passed bias filter:                      242  (0.0134977); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.23s 00:00:00.88 Elapsed: 00:00:00.38
# Mc/sec: 8666.23
//
Query:       KHJ33718.1  [L=429]
Description: putative protein-vacuolar targeting protein atg18 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
     0.0052   17.6   0.9        3.9    8.5   0.0    4.4  4  WD40         WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.012   15.9   0.0        0.3   11.4   0.0    3.1  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.33     3e+03      21      36 ..      11      25 ..       3      44 .. 0.47
   2 ?    0.2   0.0      0.19   1.7e+03       9      25 ..     117     136 ..     109     137 .. 0.56
   3 !    8.5   0.0   0.00043       3.9       5      34 ..     181     211 ..     177     216 .. 0.81
   4 ?    3.0   0.0     0.025   2.2e+02       9      36 ..     229     258 ..     220     260 .. 0.74

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.33
                TSSEEEEEETTSEEEE CS
        WD40 21 dgawlasGsdDgtvri 36
                d + la G+  +  ri
  KHJ33718.1 11 DYSCLAVGT-SRGFRI 25
                555555543.222222 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.19
                 SS.SS..EEEEEEETTSSEE CS
        WD40   9 GH.ss..vtslafspdgawl 25 
                 +  ++  ++++a s+d+ ++
  KHJ33718.1 117 TSpNPnaICAFASSSDNCYI 136
                 44333447777666666665 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00043
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtv 34 
                  +  +H s+ +++a + +g++la++s  gt+
  KHJ33718.1 181 NVVGAHrSPLSCIALNNEGTLLATASVTGTI 211
                 56779*999**************99964444 PP

  == domain 4  score: 3.0 bits;  conditional E-value: 0.025
                 SS..SSEEEEEEETTSSEEEEEETTSEEEE CS
        WD40   9 GH..ssvtslafspdgawlasGsdDgtvri 36 
                 G   s ++sl+f+ ++++l+ +s   tv+i
  KHJ33718.1 229 GTypSTIYSLSFNLSSTLLCVSSATDTVHI 258
                 555456************987776777777 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.57   5.1e+03      45      60 ..       7      22 ..       4      44 .. 0.77
   2 ?   -0.3   0.0      0.15   1.3e+03      49      82 ..      89     121 ..      53     128 .. 0.80
   3 ?    3.6   0.0    0.0094        84      38      77 ..     187     227 ..     179     232 .. 0.82
   4 ?   11.4   0.0   3.4e-05       0.3       5      69 ..     197     263 ..     193     281 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.57
  ANAPC4_WD40 45 aWkpdgklLavaysdg 60
                  +++d + Lav++s g
   KHJ33718.1  7 TFNQDYSCLAVGTSRG 22
                 5778888999999887 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.15
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhslsvksek 82 
                  + k Lav  +  e+ l+d+++ +++ ++s++ + 
   KHJ33718.1  89 NRKRLAVILE-EEIYLYDISNMTLLYTISTSPNP 121
                  5667777665.57899999999999998887664 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.0094
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdg.evrlldaesgkvvhsls 77 
                   s  +++a +++g+lLa a   g  +r+++  +g+ + +++
   KHJ33718.1 187 RSPLSCIALNNEGTLLATASVTGtIIRVFSLPKGTKLYQFR 227
                  566788999*********99999467999999998887775 PP

  == domain 4  score: 11.4 bits;  conditional E-value: 3.4e-05
  ANAPC4_WD40   5 ptmDLiAlatedgel.lvfRl.ngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaes 69 
                  ++  L+A a+ +g + +vf l +g +++++ + +  s++ sL+++ + +lL+v+ +  +v+++   +
   KHJ33718.1 197 NEGTLLATASVTGTIiRVFSLpKGTKLYQFRRGTYPSTIYSLSFNLSSTLLCVSSATDTVHIFRLTN 263
                  566789999988875268888899**************************************98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       345  (0.0192426); expected 358.6 (0.02)
Passed bias filter:                      261  (0.0145574); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 3275.20
//
Query:       KHJ33719.1  [L=779]
Description: putative dna repair helicase rad3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-56  189.5   2.9    6.5e-56  188.7   2.9    1.4  1  DEAD_2        DEAD_2
    2.1e-49  167.8   1.7    1.1e-43  149.1   0.5    2.5  2  HBB           Helical and beta-bridge domain
    8.1e-44  149.8   0.2    2.6e-42  144.9   0.0    2.8  3  Helicase_C_2  Helicase C-terminal domain
    0.00038   20.5   0.1     0.0081   16.2   0.0    2.5  1  ResIII        Type III restriction enzyme, res subunit
     0.0021   17.8   0.0       0.41   10.4   0.0    2.4  2  DEAD          DEAD/DEAH box helicase
     0.0047   16.4   0.3     0.0095   15.4   0.3    1.4  1  UvrD_C        UvrD-like helicase C-terminal domain
  ------ inclusion threshold ------
       0.03   14.6   0.2        4.2    7.6   0.0    2.8  2  AAA_22        AAA domain
      0.037   12.7   0.0       0.17   10.6   0.0    1.9  1  SNF2_N        SNF2 family N-terminal domain
       0.05   13.3   0.0         16    5.1   0.0    2.7  3  AAA_30        AAA domain
       0.15   11.3   0.1        8.5    5.5   0.0    2.5  3  DUF2075       Uncharacterized conserved protein (DUF2075)


Domain annotation for each model (and alignments):
>> DEAD_2  DEAD_2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.7   2.9   3.6e-59   6.5e-56       1     176 []      55     239 ..      55     239 .. 0.97

  Alignments for each domain:
  == domain 1  score: 188.7 bits;  conditional E-value: 3.6e-59
                 EEESSHHHHHHHHHHHHHHHHHCHH....HS---EEEE--CCCC-SCHHCCCHHCCCCHHHHHHHHHCCHHCCH......TTTTTT-SCCCCHHHHHHH CS
      DEAD_2   1 ycsRThsqleqvvkelkklesykkk....kekvkvviLgSRknlCineevkkekkekavneaCkelkkkkaeek......eekCsffenleelkklkkl 89 
                 ycsRT+s++e++++el+ l++y+++    +e+++ ++L+SRknlC+++ vk+ek+++ v+++C++l++  ++ek      +  C +++nl +lk+ ++l
  KHJ33719.1  55 YCSRTMSEIEKALAELRALMKYRAEqlgyEEEFRGLGLTSRKNLCLHPTVKREKSGAIVDAKCRSLTARFVKEKkergenVPICIYHDNL-DLKEPHNL 152
                 9**********************9889999**************************************999988899998899****999.89999*** PP

                 HHHC---CHHHHHHHHHCT--HHHHHHHHHCCTSEEEEEHHHHTSCCCHHHHHT..GCGCEEEECTCCCHHHHHHHCC-EEEECHHH CS
      DEAD_2  90 lleevvdiedlvelgeklklCPYylsrelledadiiilpYqyLldekireslkgislknsivilDEAhNiedvceeaasveiseesl 176
                 +  +v+++e l++++e+ k+CPY++sr++++++++ii++Y+yLld+ki+e++++  +k++iv++DEAhNi++vc+e++s++i+++sl
  KHJ33719.1 153 VDPGVYTLESLMRYCEQEKICPYFASRRMMSFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSTDITNDSL 239
                 *****************************************************7779**************************9986 PP

>> HBB  Helical and beta-bridge domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.1   0.5   6.2e-47   1.1e-43       2     190 .]     253     396 ..     252     396 .. 0.99
   2 !   17.2   0.0   1.8e-06    0.0032     118     165 ..     413     461 ..     408     470 .. 0.83

  Alignments for each domain:
  == domain 1  score: 149.1 bits;  conditional E-value: 6.2e-47
                 CHCHCCCCHHCCCCCCCHHHHHHHHHCCCCHHHHSTTTECCHCHHHHHCHCHHHCHHHHHHHHHHHHHHHHHHHCCHHCCCTCC-SHHHHHHHHHHHHH CS
         HBB   2 ikeaketdepklqdeysrLvegLreaeeereeeyvleeepilpdeileeavpglirsaehflsllkrlveygkarreekieksesPrsflsrlaeflla 100
                 i+e+ke+d++kl +ey +LvegL++a+e+++e+ ++++ p lpd++l+eavpg+ir+aehf+++lkr++ey+k+r+++++++se+P sfl +l+     
  KHJ33719.1 253 ISEMKEKDKEKLVNEYAKLVEGLKDASEAQAEDAFMSN-PALPDDLLTEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVRQVISETPPSFLAHLK----- 345
                 89************************************.*******************************************************..... PP

                 HHTS.TTTEEEEEE.STT.EECCCCS-TCCHHHHHHHCHCCCCCCTS-SSHHHHHHHHT....EEE.S..S.GGHCCCCCCCCCSHTCCC CS
         HBB 101 wlssdeedYvrlvskeegesLeavcldPskalrflkerlssllmsgtltpleeysdiiGleaklkkfpspfpkEnlivlfatdVsTkyke 190
                                      e ++++ +k+lrf++erlssl+++++l+++e+y+++                 +++++fat+V+T++k+
  KHJ33719.1 346 ---------------------EYTFIE-KKPLRFCAERLSSLVRTLELANIEDYQPL-----------------QEVATFATLVATYEKG 396
                 .....................******.*****************************.................*************986 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 1.8e-06
                 T.EECCCCS-TCCHHHHHHHCHCC.CCCCTS-SSHHHHHHHHT....EE CS
         HBB 118 gesLeavcldPskalrflkerlss.llmsgtltpleeysdiiGleaklk 165
                 ++ L+ +cld + a++++ +r ss +++sgt++ple y +i+G+ ++++
  KHJ33719.1 413 NPVLHFTCLDAAIAIKPVFDRFSSvIITSGTISPLEMYPKILGFSTVVQ 461
                 68999*****999999998886652789****************96654 PP

>> Helicase_C_2  Helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1      0.14   2.5e+02      17      58 ..     218     270 ..     201     289 .. 0.58
   2 ?   -2.7   0.0       3.3   5.9e+03      19      57 ..     313     348 ..     298     359 .. 0.67
   3 !  144.9   0.0   1.4e-45   2.6e-42       2     170 ..     508     680 ..     507     681 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.14
  Helicase_C_2  17 pSyklleevverlkeel............eskkieifveekeesrekvleeyke 58 
                     +++ + ++e l++              ++ +++i +  ke+++ek+++ey +
    KHJ33719.1 218 EAHNIDNVCIESLSTDItndslrkatrgaQNLEMKISEM-KEKDKEKLVNEYAK 270
                   444455555556655432222222222224445566666.999999***99998 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 3.3
  Helicase_C_2  19 yklleevverlkeeleskkieifveekeesrekvleeyk 57 
                    ++l++++e+lk++++    +++ e +  s+ + l+ey+
    KHJ33719.1 313 VAFLKRFIEYLKTRMK--VRQVISE-TPPSFLAHLKEYT 348
                   5788999999999874..4466666.6666666666665 PP

  == domain 3  score: 144.9 bits;  conditional E-value: 1.4e-45
  Helicase_C_2   2 lellevvpggvlvffpSyklleevverlkeel....eskkieifvee.keesrekvleeykek..kkkgaillavcrGklsEGidfsddllraviiv 91 
                    e+++ +p+g++vffpSy ++e++++ ++  +     +k + i+ve+ ++++++  le+y+++  +++gaill+v+rGk+sEGidf  +++r v+++
    KHJ33719.1 508 TEFSKLTPDGMVVFFPSYLYMESIISMWQGMGildeVWKYKLILVETpDAQETSLALETYRTAccNGRGAILLCVARGKVSEGIDFDHQYGRTVLCI 604
                   578999************************87444344444777776688999999******667******************************** PP

  Helicase_C_2  92 glPfpnpkdpeveakreyldekgkknsgkewylpealravnQaiGRliRhkdDygaivllDeRfakeeireklpkwlre 170
                   g+Pf+ +++  ++a+ e+l+e+ +  + +++   +a+r   Q++GR++R kdDyg++vl D+Rf +++  ++lp+w+++
    KHJ33719.1 605 GVPFQYTESRILKARLEFLRETYR-IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFLRKR--NQLPRWINQ 680
                   ************************.999**************************************98..88****986 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   4.5e-06    0.0081      26     144 ..      21     222 ..      11     255 .. 0.53

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 4.5e-06
                 EEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSH.HHHHHHHHHG................................................. CS
      ResIII  26 rglikmaTGtGKTlvaaklierllkkgkeekflflvprk.slleqtleef................................................. 74 
                 + +++m+ GtGKT+ +++li ++++ ++e + l+ + r+ s +e++l e+                                                 
  KHJ33719.1  21 HCVLEMPSGTGKTVSLLSLIVAYQQYYPEHRKLIYCSRTmSEIEKALAELralmkyraeqlgyeeefrglgltsrknlclhptvkreksgaivdakcrs 119
                 6789*********************99999777777665477888888884555555555555555555555555544444444444444444433333 PP

                 ..GGGTGG.......GEEEESSS-B--................................................-SEEEEEHHHHHHTH........H CS
      ResIII  75 ..kkflseayke...igkkvsgdkkka.........................................kekdstnkkilvttiqsldadseeeeeesee 127
                   ++f +e++++   +          +                                         +++  + +++++ +++ l  ++       e+
  KHJ33719.1 120 ltARFVKEKKERgenV----------PiciyhdnldlkephnlvdpgvytleslmryceqekicpyfaSRRMMSFCNVIIYSYHYLLDPK-----IAER 203
                 3211111111111110..........0122222222122222223333333333333333333333333333333444444444443333.....3333 PP

                 HHTTT-S..EEEEETGGGT CS
      ResIII 128 llrdrfd..viiiDEaHrl 144
                  +++ ++  ++++DEaH++
  KHJ33719.1 204 VSKELSKdcIVVFDEAHNI 222
                 3333222347777777776 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00023      0.41      10      74 ..      15      77 ..       8     104 .. 0.77
   2 ?    4.8   0.0     0.012        21      98     136 ..     185     225 ..     168     251 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00023
                HHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTS CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 10 lilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyi 74
                ++  gg+++++++ G+GKT   l  ++   y++   ++ k ++ + t + +e+ l +l+ ++ky 
  KHJ33719.1 15 TLDAGGHCVLEMPSGTGKTVSLLSLIV--AYQQYYPEHRKLIYCSRTMSEIEKALAELRALMKYR 77
                444799*************98655555..333345788899999999999999999999999983 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.012
                 CSEEEEEHHHHHHHH..HCTSSHCTTEEEEEEETHHHHHHT CS
                 xxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  98 vdivvgtpgrlddll..stgklnlsqvrflVlDEadrlldq 136
                 +++++     l+d    ++ + +ls+  ++V+DEa+++ + 
  KHJ33719.1 185 CNVIIYSYHYLLDPKiaERVSKELSKDCIVVFDEAHNIDNV 225
                 5666666666666333455555699999********99876 PP

>> UvrD_C  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.3   5.3e-06    0.0095     135     273 ..     226     389 ..     216     404 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 5.3e-06
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C 135 ilkrlvlgigkatveriseelkklglsltDfikedtleygeeFieliraleeknl..............elllkkiektaeerqalvskyadlfkelae 219
                  +++l ++i+++++++  +  ++l ++++++ ++d+ ++++e+++l++ l++  +                ll++  + + +r +++ ++ + f e+ +
  KHJ33719.1 226 CIESLSTDITNDSLRKATRGAQNLEMKISEMKEKDKEKLVNEYAKLVEGLKDASEaqaedafmsnpalpDDLLTEAVPGNIRRAEHFVAFLKRFIEYLK 324
                 688999**********************************************9999*************546777888888899999999999999988 PP

                 xxxxxxxxxxxxx.............xxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      UvrD_C 220 klaelkekseskr.............kkee...klenlreLysllkelekkeeeeeveeklneileiatL 273
                    ++++  ++               +k+      e+l +L+++l+ ++++++++     l+e+ + atL
  KHJ33719.1 325 TRMKVRQVISETPpsflahlkeytfiEKKPlrfCAERLSSLVRTLELANIEDYQP-----LQEVATFATL 389
                 8888888887777788998888888633335666788888888888877755554.....4555555555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0    0.0024       4.2       6      60 ..      20      77 ..      16     139 .. 0.69
   2 ?    3.9   0.0     0.034        61      88     117 ..     207     236 ..     195     251 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0024
      AAA_22  6 gilvvtGesGtGKTtllrrlleqldeeakaee....erpevvfvtlpsstsskdllrel 60
                g++v+  +sGtGKT++l  l   +++++ +e+     ++++++   +++ +++ l++  
  KHJ33719.1 20 GHCVLEMPSGTGKTVSLLSLIVAYQQYY-PEHrkliYCSRTMSEIEKALAELRALMKYR 77
                67777779************99997654.333467766666543333333444444444 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.034
      AAA_22  88 aravielliiDEaqhlrseealeeL.rslln 117
                 + ++  +++ DEa+++  + ++e L  ++ n
  KHJ33719.1 207 ELSKDCIVVFDEAHNI-DNVCIESLsTDITN 236
                 444467999*******.78887777555555 PP

>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   9.3e-05      0.17      64     192 ..      28     225 ..      17     244 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 9.3e-05
                 TTS--HHHHHHHHH.............................................HHTTTS---....................S-EEEE--H.H CS
                 xxxxxxxxxxxxxxxxx..........................................xxxxxxxxx.............xxxxxxxxxxxxxxxx.x RF
      SNF2_N  64 mGLGKTvqvlalilaqr..........................................akeekdkek.............krkdtlagptLivvPa.s 106
                  G GKTv +l+li a +                                                  +              ++++ + ++++ ++  s
  KHJ33719.1  28 SGTGKTVSLLSLIVAYQqyypehrkliycsrtmseiekalaelralmkyraeqlgyeeeF-------RglgltsrknlclhPTVKREKSGAIVDAKCrS 119
                 5899********997776666666666666666666665555555544444444433330.......03334433333444455555555888888888 PP

                 HHHHHHHHHHHH-TTS-EEE--SSHHHH........................-----------------EEEE-HHHHHHHT......TTS-S-S-SE. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
      SNF2_N 107 lldqWeneierhvsssalrvlvyggqkk........................mkkkntkvapklladydvvittYdvlsreaelqkkrsvlkqvewkr. 180
                 l    ++e     ++ ++ +++y+++                          +k    + +++++   +v+i +Y++l   +       v k+++ ++ 
  KHJ33719.1 120 LTARFVKEK--KERGENVPICIYHDNLDlkephnlvdpgvytleslmryceqEKICPYFASRRMMSFCNVIIYSYHYLLDPK---IAERVSKELSKDCi 213
                 888888874..45666667777777666789999999999999999999776444456788999999************666...33344445555551 PP

                 EEES-GGGT--T CS
                 xxxxxxxxxxxx RF
      SNF2_N 181 vvlDEghtlkns 192
                 vv DE+h++ n 
  KHJ33719.1 214 VVFDEAHNIDNV 225
                 567*****9985 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0    0.0091        16      20      55 ..      21      59 ..      12      98 .. 0.76
   2 ?   -2.3   0.0       1.7   3.1e+03      84     114 ..     206     236 ..     186     242 .. 0.77
   3 ?    4.9   0.0     0.011        20     136     175 ..     708     746 ..     704     759 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0091
      AAA_30 20 vavltGpAGtGKttalkalreaweaa.g..grviglApt 55
                 +vl+ p GtGKt +l +l  a+++     +++i ++ t
  KHJ33719.1 21 HCVLEMPSGTGKTVSLLSLIVAYQQYyPehRKLIYCSRT 59
                5789999*********99999998874355566655555 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.7
      AAA_30  84 arlepgtllivDEagmvdtkqlaallkaaek 114
                 ++l+++ +++ DEa  +d+  +++l + +++
  KHJ33719.1 206 KELSKDCIVVFDEAHNIDNVCIESLSTDITN 236
                 56777789999***99999888888777665 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.011
      AAA_30 136 vlrdlveaagigtaeLtevvRqkeseeraaalalregdae 175
                 ++r+  +++gi t +L+++ R+ke+ee++a ++l + d  
  KHJ33719.1 708 PFRSS-DQEGISTWSLEDLERFKEKEEEEAIKKLMTADGG 746
                 67777.5799********************9999877755 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0    0.0047       8.5      10      54 ..      28      70 ..      22      91 .. 0.66
   2 ?    3.0   0.0     0.028        50      83     102 ..     205     224 ..     179     266 .. 0.76
   3 ?   -3.8   0.0       3.1   5.6e+03     162     184 ..     701     725 ..     672     739 .. 0.60

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0047
     DUF2075 10 aGtGKtvvllnllaeleddeeertavylsvNhplvlvlrealakk 54
                +GtGKtv ll+l++++  ++ + ++  l+   + +  +++ala+ 
  KHJ33719.1 28 SGTGKTVSLLSLIVAY--QQYYPEHRKLIYCSRTMSEIEKALAEL 70
                6************999..444444444444445555555555443 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.028
     DUF2075  83 kkeepkedvvivDEAhrllt 102
                 +ke  k ++v++DEAh + +
  KHJ33719.1 205 SKELSKDCIVVFDEAHNIDN 224
                 566778899*******8766 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 3.1
     DUF2075 162 v..hLksqfRvaaseaviewvdall 184
                 +  ++++ fR++ +e ++ w  + l
  KHJ33719.1 701 FlrNMAQPFRSSDQEGISTWSLEDL 725
                 1456778888888888888854444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (779 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       832  (0.0464053); expected 358.6 (0.02)
Passed bias filter:                      617  (0.0344135); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.43
# Mc/sec: 5463.50
//
Query:       KHJ33720.1  [L=477]
Description: putative traf-type zinc finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-11   45.3  26.0    1.5e-06   28.7   5.1    4.5  4  zf-TRAF       TRAF-type zinc finger
    7.4e-07   28.9  10.2    7.4e-07   28.9  10.2    4.8  5  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    5.7e-06   26.6  10.1    5.7e-06   26.6  10.1    4.7  2  zf-RING_2     Ring finger domain
    1.1e-05   25.7   7.7    1.1e-05   25.7   7.7    3.5  1  zf-TRAF_2     TRAF-like zinc-finger
    2.9e-05   24.0  10.7    2.9e-05   24.0  10.7    3.1  4  zf-RING_UBOX  RING-type zinc-finger
    4.7e-05   23.2  11.5    4.7e-05   23.2  11.5    5.0  2  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    7.6e-05   22.5   7.6    7.6e-05   22.5   7.6    4.3  3  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    0.00018   21.4   8.4    0.00018   21.4   8.4    4.5  4  zf-RING_5     zinc-RING finger domain
      0.001   18.8   9.0      0.001   18.8   9.0    3.6  3  Prok-RING_4   Prokaryotic RING finger family 4
  ------ inclusion threshold ------
      0.016   15.2   0.7      0.016   15.2   0.7    3.0  2  Sina          Seven in absentia protein family
        0.2   12.0   0.9       0.62   10.4   0.9    1.8  1  TSC22         TSC-22/dip/bun family
        6.3    6.5  17.5        2.6    7.7   0.1    5.1  5  zf_UBZ        Ubiquitin-Binding Zinc Finger


Domain annotation for each model (and alignments):
>> zf-TRAF  TRAF-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   3.8   1.1e-06    0.0016       8      42 ..     146     178 ..     140     193 .. 0.85
   2 !    7.1   5.3    0.0057       8.6       4      42 ..     198     234 ..     195     235 .. 0.86
   3 !   28.7   5.1     1e-09   1.5e-06       5      60 .]     226     278 ..     226     278 .. 0.90
   4 ?   -0.4   0.0       1.3     2e+03      42      53 ..     320     331 ..     308     341 .. 0.73

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1.1e-06
                 SEEE-TT--S-BEEETTTCCCCCCTTSTTS--XXS CS
     zf-TRAF   8 apvpCpnecckkkilRkdlkdHlekdCkkaevkCk 42 
                  +v C  +cc  +i+R  + +H++k+C++  vkC+
  KHJ33720.1 146 LKVLC--PCCHAAISRSMIANHMSKYCPESLVKCP 178
                 57899..89*************************7 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0057
                 H-SSSEEE-TT--S-BEEETTTCCCCCCTTSTTS--XXS CS
     zf-TRAF   4 tCpfapvpCpnecckkkilRkdlkdHlekdCkkaevkCk 42 
                  C  +  +Cp+  ckk +l+ d+  H e+ C+ +   C+
  KHJ33720.1 198 CCLHYLSTCPD--CKKLLLQIDMTTHREDLCESRSSICE 234
                 46667779*87..9********************99996 PP

  == domain 3  score: 28.7 bits;  conditional E-value: 1e-09
                 -SSSEEE-TT--S-BEEETTTCCCCCCTTSTTS--XXSSXXXXSXXXXXHHHHHHT CS
     zf-TRAF   5 CpfapvpCpnecckkkilRkdlkdHlekdCkkaevkCkfkevGCkekvkrealqkH 60 
                 C     +C ++c+ + ilR +  +H + +C +ae++C +k+ GC+++++r++l++H
  KHJ33720.1 226 CESRSSIC-EKCGLE-ILRIKRVNHEK-ECLEAEIPCIWKDLGCEHQFPRKELENH 278
                 66666789.569988.9999999**88.***************************9 PP

  == domain 4  score: -0.4 bits;  conditional E-value: 1.3
                 SSXXXXSXXXXX CS
     zf-TRAF  42 kfkevGCkekvk 53 
                 kf e+GCk+   
  KHJ33720.1 320 KFLESGCKQFDR 331
                 79999**97544 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9  10.2     5e-10   7.4e-07       2      39 ..      85     121 ..      84     121 .. 0.98
   2 ?   -0.1   0.8      0.59   8.8e+02      35      40 .]     147     153 ..     139     171 .. 0.68
   3 ?   -1.0   4.3       1.1   1.7e+03       5      27 ..     186     210 ..     185     226 .. 0.78
   4 ?   -1.6   3.6       1.7   2.5e+03      21      32 ..     231     242 ..     205     252 .. 0.70
   5 ?   -1.4   0.0       1.5   2.2e+03      18      24 ..     266     272 ..     260     280 .. 0.83

  Alignments for each domain:
  == domain 1  score: 28.9 bits;  conditional E-value: 5e-10
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLeekneCPl 39 
                 C+iC+  l dp  +t C+H fC++C++ +L+++  CP+
  KHJ33720.1  85 CAICQCALIDP-ISTRCQHIFCSECLDNALSHSLTCPI 121
                 ***********.9************************6 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.59
  zf-C3HC4_2  35 n.eCPlC 40 
                 +  CP C
  KHJ33720.1 147 KvLCPCC 153
                 4456666 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 1.1
  zf-C3HC4_2   5 CldmlkdpsvvtpCgH..vfCqkCi 27 
                 C + +k    ++ C H  ++C +C 
  KHJ33720.1 186 CSELIKRKFSTQCCLHylSTCPDCK 210
                 7778888777778888556788885 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 1.7
  zf-C3HC4_2  21 vfCqkCilrsLe 32 
                 + C+kC l+ L+
  KHJ33720.1 231 SICEKCGLEILR 242
                 579999999886 PP

  == domain 5  score: -1.4 bits;  conditional E-value: 1.5
  zf-C3HC4_2  18 CgHvfCq 24 
                 C+H+f +
  KHJ33720.1 266 CEHQFPR 272
                 ****965 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6  10.1   3.8e-09   5.7e-06       3      44 .]      85     123 ..      83     123 .. 0.90
   2 ?   -1.4   0.4         2     3e+03      15      25 ..     258     270 ..     248     280 .. 0.63

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 3.8e-09
   zf-RING_2   3 CpICleelssadsvlllpCgHvfhreClerwlrssstCPlCr 44 
                 C+IC+++l ++ s++   C+H+f+ eCl++ l +s tCP+ r
  KHJ33720.1  85 CAICQCALIDPISTR---CQHIFCSECLDNALSHSLTCPIDR 123
                 ********9777766...*********************966 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2
   zf-RING_2  15 svl..llpCgHvf 25 
                  ++   l C H f
  KHJ33720.1 258 PCIwkDLGCEHQF 270
                 3442133699988 PP

>> zf-TRAF_2  TRAF-like zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   7.7   7.7e-09   1.1e-05       4      77 ..     206     282 ..     203     292 .. 0.81

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 7.7e-09
   zf-TRAF_2   4 CekCik..kkCkvkveasvsCelis.CkekCgavlhsCkeeehkllCpkekvpClnaeyGCPltlarkklakhlevC 77 
                 C  C k   +  ++++++  Ce  s   ekCg  + + k+ +h+  C ++++pC+ +  GC ++++rk+l++hl+ C
  KHJ33720.1 206 CPDCKKllLQIDMTTHREDLCESRSsICEKCGLEILRIKRVNHEKECLEAEIPCIWKDLGCEHQFPRKELENHLTGC 282
                 666655333455566677778765422456*********************************************99 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0  10.7     2e-08   2.9e-05       1      39 []      85     120 ..      85     120 .. 0.94
   2 ?   -2.2   1.0         3   4.4e+03      14      19 ..     149     155 ..     138     178 .. 0.57
   3 ?   -3.8   0.2       9.7   1.4e+04      20      24 ..     232     236 ..     231     239 .. 0.82
   4 ?   -2.7   0.2       4.4   6.5e+03      25      26 ..     260     261 ..     250     273 .. 0.48

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 2e-08
  zf-RING_UBOX   1 CpIClelftdPlv.lpCGHtFCreClwelskslegafkCP 39 
                   C IC+  + dP + + C+H+FC+eCl   ++ l+ +++CP
    KHJ33720.1  85 CAICQCALIDP-IsTRCQHIFCSECL---DNALSHSLTCP 120
                   ***********.6468**********...9*********9 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3
  zf-RING_UBOX  14 l.pCGHt 19 
                   l pC H 
    KHJ33720.1 149 LcPCCHA 155
                   5566664 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 9.7
  zf-RING_UBOX  20 FCreC 24 
                   +C++C
    KHJ33720.1 232 ICEKC 236
                   79998 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 4.4
  zf-RING_UBOX  25 lw 26 
                   +w
    KHJ33720.1 260 IW 261
                   22 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2  11.5   3.1e-08   4.7e-05       1      39 [.      85     120 ..      85     121 .. 0.97
   2 ?   -0.3   0.4      0.65   9.8e+02      14      22 ..     263     271 ..     252     281 .. 0.72

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 3.1e-08
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--T CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCP 39 
                 C+iC++ + +p  ++ C+H fCs+C+++ l+   + +CP
  KHJ33720.1  85 CAICQCALIDPI-STRCQHIFCSECLDNALS--HSLTCP 120
                 ************.******************..8899*9 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.65
                 E-TTS--B- CS
    zf-C3HC4  14 lleCkHsfC 22 
                  l C+H+f 
  KHJ33720.1 263 DLGCEHQFP 271
                 578****95 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   7.6   5.1e-08   7.6e-05       2      45 ..      82     124 ..      81     128 .. 0.93
   2 ?    2.9   0.9     0.068     1e+02      39      49 ..     149     159 ..     141     172 .. 0.75
   3 ?    0.1   1.3      0.49   7.3e+02      25      40 ..     232     252 ..     225     254 .. 0.78

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 5.1e-08
                 GSB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT-- CS
  zf-C3HC4_3   2 deeCviClerprnvvllpCgHlvlCeeCaekllkrkkkCpiCrr 45 
                 + +C iC+ +  + +  +C+H+ +C+eC+++ l+++ +Cpi r+
  KHJ33720.1  82 NLICAICQCALIDPISTRCQHI-FCSECLDNALSHSLTCPIDRS 124
                 689*******************.******************886 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.068
                 B-TTT--B--E CS
  zf-C3HC4_3  39 kCpiCrrpiek 49 
                  Cp+C++ i++
  KHJ33720.1 149 LCPCCHAAISR 159
                 47777776654 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.49
                 E-HHHHHHHHH.....TT-B- CS
  zf-C3HC4_3  25 lCeeCaekllk.....rkkkC 40 
                 +Ce+C  ++l+     ++k+C
  KHJ33720.1 232 ICEKCGLEILRikrvnHEKEC 252
                 8****9999887777666666 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   8.4   1.2e-07   0.00018       2      43 ..      85     123 ..      84     124 .. 0.93
   2 ?   -0.3   0.7      0.74   1.1e+03      37      43 ..     148     154 ..     139     172 .. 0.73
   3 ?   -1.0   1.2       1.2   1.8e+03      24      34 ..     232     247 ..     226     259 .. 0.71
   4 ?   -2.7   0.1       3.9   5.9e+03      20      30 ..     266     276 ..     263     283 .. 0.47

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 1.2e-07
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCr 43 
                 C +C + l    +++ t+C+HifC++Cl+++l  + +Cpi r
  KHJ33720.1  85 CAICQCAL---IDPISTRCQHIFCSECLDNALSHSLTCPIDR 123
                 99999999...999*************************965 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.74
   zf-RING_5  37 avCpiCr 43 
                 + Cp C+
  KHJ33720.1 148 VLCPCCH 154
                 5677775 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 1.2
   zf-RING_5  24 fCekClkkll.....e 34 
                 +CekC  + l     +
  KHJ33720.1 232 ICEKCGLEILrikrvN 247
                 7888877666555554 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 3.9
   zf-RING_5  20 CgHifCekClk 30 
                 C H f  k l 
  KHJ33720.1 266 CEHQFPRKELE 276
                 55555333333 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   9.0     7e-07     0.001       1      41 [.      85     127 ..      85     131 .. 0.88
   2 ?    2.7   0.3     0.078   1.2e+02      32      43 ..     149     160 ..     140     165 .. 0.78
   3 ?   -0.3   1.2      0.67     1e+03      30      38 ..     203     211 ..     194     217 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 7e-07
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCfdsk.dls.sCPlCqrris 41 
                  C +C+ +  ++i   C+H++C eC+d++  +s +CP+ ++ + 
   KHJ33720.1  85 CAICQCALIDPISTRCQHIFCSECLDNAlSHSlTCPIDRSILT 127
                  99************************9966669***9877665 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.078
  Prok-RING_4  32 sCPlCqrrisks 43 
                   CP C+  is+s
   KHJ33720.1 149 LCPCCHAAISRS 160
                  5****9998865 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.67
  Prok-RING_4  30 lssCPlCqr 38 
                  ls+CP C++
   KHJ33720.1 203 LSTCPDCKK 211
                  579999987 PP

>> Sina  Seven in absentia protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   1.8       2.1   3.1e+03      12      47 ..     147     177 ..     140     189 .. 0.64
   2 ?   15.2   0.7   1.1e-05     0.016       7      44 ..     249     286 ..     243     436 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.1
        Sina  12 slkfPckyaqsgCevtlpleekakHeeeckfrpysC 47 
                 ++ +Pc++a+++ +++  + +     + c    ++C
  KHJ33720.1 147 KVLCPCCHAAISRSMIANHMS-----KYCPESLVKC 177
                 688999999887774333322.....3455555555 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 1.1e-05
        Sina   7 ekvaeslkfPckyaqsgCevtlpleekakHeeeckfrp 44 
                 ek + + + Pc  ++ gCe+++p +e ++H + c+fr 
  KHJ33720.1 249 EKECLEAEIPCIWKDLGCEHQFPRKELENHLTGCDFRF 286
                 555667899***************************96 PP

>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.9   0.00041      0.62      17      39 ..     292     314 ..     290     320 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00041
       TSC22  17 evLkekIkeLeernseleeENsl 39 
                 evLk++Ik+L +++++l e N+l
  KHJ33720.1 292 EVLKKEIKDLRSNVRTLTETNQL 314
                 9****************999986 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.28   4.1e+02       2       8 ..     102     108 ..     101     118 .. 0.81
   2 ?    2.9   0.5     0.055        82       3      20 ..     148     165 ..     147     166 .. 0.87
   3 ?    7.7   0.1    0.0017       2.6       4      20 ..     205     221 ..     204     222 .. 0.94
   4 ?    4.3   0.2      0.02        30       4      20 ..     232     248 ..     230     249 .. 0.80
   5 ?   -2.2   0.4       2.3   3.4e+03       8      20 ..     266     278 ..     266     279 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.28
      zf_UBZ   2 tylCerC 8  
                 +++C++C
  KHJ33720.1 102 HIFCSEC 108
                 789**** PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.055
      zf_UBZ   3 ylCerCgkeipeselqEH 20 
                 +lC+ C++ i+ s+ + H
  KHJ33720.1 148 VLCPCCHAAISRSMIANH 165
                 68*********9998888 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0017
      zf_UBZ   4 lCerCgkeipeselqEH 20 
                 +C++C+k +++ +++ H
  KHJ33720.1 205 TCPDCKKLLLQIDMTTH 221
                 7*************999 PP

  == domain 4  score: 4.3 bits;  conditional E-value: 0.02
      zf_UBZ   4 lCerCgkeipeselqEH 20 
                 +Ce+Cg ei+  ++  H
  KHJ33720.1 232 ICEKCGLEILRIKRVNH 248
                 7*******997776666 PP

  == domain 5  score: -2.2 bits;  conditional E-value: 2.3
      zf_UBZ   8 CgkeipeselqEH 20 
                 C +++p  el+ H
  KHJ33720.1 266 CEHQFPRKELENH 278
                 9999**9999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       962  (0.0536561); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 3125.49
//
Query:       KHJ33721.1  [L=518]
Description: putative ulp1 protease family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-19   71.3   0.0    2.6e-19   69.9   0.0    1.7  1  Peptidase_C48  Ulp1 protease family, C-terminal catalytic dom
  ------ inclusion threshold ------
       0.01   14.6   0.2      0.028   13.2   0.1    1.8  1  Peptidase_C57  Vaccinia virus I7 processing peptidase


Domain annotation for each model (and alignments):
>> Peptidase_C48  Ulp1 protease family, C-terminal catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.9   0.0   2.9e-23   2.6e-19      14     205 ..     333     495 ..     312     501 .. 0.72

  Alignments for each domain:
  == domain 1  score: 69.9 bits;  conditional E-value: 2.9e-23
                    HHHHHHHH...CCCTCCCEEE--THHHHHHC..........SS.......TCHCHHHCTTCCCCC..S..-GGG-SEEEEEEEC.TTEEEEEEEET CS
  Peptidase_C48  14 llaerles...seskaervhflntffvskLtkavkdfkknkskkkfkeskkkdlyngvrrwtrkv..nkedlfdkdiiyiPinedgkHWvlliinl 104
                    + +e+l++   ++++ +     n+ff+  L                     k++ +   r ++++      l+++d +++Pi+  g+HW l ++  
     KHJ33721.1 333 NAREELSKfdiEPNSVPPFIAHNSFFYETLR--------------------KRGPKSLDRLMKRKgaPGVSLLEVDSVFVPICN-GSHWTLGVVRP 407
                    3334444443444444445566888888888....................333333333333332112289************.*********** PP

                    CCCEEEEE-TTS-SSH.HHHHHHHHHHHHHHHHHCCCCCSTT-.GGGEEEEEEE-----SSCCCHHHHHHHHHHHHHCTHHCHHHHHSS.HHHHHH CS
  Peptidase_C48 105 pdktililDSlislhtvkkenrpinnlkpyLleealkkkqkqldltpfeierltkvpqqknsgDCGiyvlkfiellaegapqessvtltekdvdsf 200
                      kti+++DS+++ ++      +i+++ ++L+ +  + +    ++ ++ i r   ++ q n++DCG++v++++ ++a g     ++   e+d+++ 
     KHJ33721.1 408 VAKTIEYFDSMGGNPS-----NFIHYMEIWLKHQLGEAY----SYDEWTIPRT-ACANQTNGYDCGVFVCTNAFCVAVGLDTLCYQ---ESDMTRQ 490
                    ****************.....9************97766....5667999998.99*********************999887644...6777776 PP

                    HHHHH CS
  Peptidase_C48 201 rkkla 205
                    rk +a
     KHJ33721.1 491 RKSIA 495
                    66665 PP

>> Peptidase_C57  Vaccinia virus I7 processing peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   3.1e-06     0.028     236     277 ..     390     431 ..     287     460 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.1e-06
  Peptidase_C57 236 vmfgfiYlshwkcvvfdkekklvlFydsgGniPeefkhyknf 277
                    v ++++  shw+  v     k++ ++ds G +P++f hy + 
     KHJ33721.1 390 VFVPICNGSHWTLGVVRPVAKTIEYFDSMGGNPSNFIHYMEI 431
                    7789**********************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       805  (0.0448993); expected 358.6 (0.02)
Passed bias filter:                      550  (0.0306766); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 3747.91
//
Query:       KHJ33722.1  [L=276]
Description: putative snare complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-10   41.2   4.6    1.2e-10   41.2   4.6    2.0  2  SNARE          SNARE domain
  ------ inclusion threshold ------
       0.16   10.8   9.7       0.13   11.1   2.8    2.3  2  Spc7           Spc7 kinetochore protein
        0.3   10.1   9.6      0.019   14.1   3.5    1.8  2  FUSC-like      FUSC-like inner membrane protein yccS
        0.3   10.9  10.4       0.18   11.6   5.6    2.1  2  RIFIN          Rifin
       0.34   11.0   9.7        7.3    6.8   0.7    3.4  3  Med9           RNA polymerase II transcription mediator compl
       0.41   10.2  11.4      0.073   12.6   1.9    2.1  2  Exonuc_VII_L   Exonuclease VII, large subunit
        4.6    7.1  15.8         14    5.6   9.9    3.2  2  Synaptobrevin  Synaptobrevin


Domain annotation for each model (and alignments):
>> SNARE  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       1.2   3.2e+03      18      32 ..     192     206 ..     192     207 .. 0.84
   2 !   41.2   4.6   4.6e-14   1.2e-10       1      53 []     221     273 ..     221     273 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHHHHC CS
       SNARE  18 eraqkeLkkavkyqk 32 
                 ++a ++L k  ++q+
  KHJ33722.1 192 DQALDNLSKSIQRQR 206
                 689999999999997 PP

  == domain 2  score: 41.2 bits;  conditional E-value: 4.6e-14
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXXXXXXXXXXXXXXXXXXXX CS
       SNARE   1 emvDrIdtnVenaqsnveraqkeLkkavkyqksnRklkciillilviillvvl 53 
                 e++D Id nV++ q+++++ +k+L   +++ k++ + k+i++li ++++l+++
  KHJ33722.1 221 EILDGIDENVDRHQTRLRQTMKQLETTARNVKNSKQIKIIAILITILVILIII 273
                 89*************************************************96 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.6    0.0077        20      96     178 ..       4      84 ..       2     106 .. 0.55
   2 ?   11.1   2.8     5e-05      0.13     135     201 ..     193     259 ..     179     264 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0077
        Spc7  96 freYmeadpdvkalmdnqfklvKtnarlqakkdWYeWRmqllegLkeglee.nlegleedkelLekqeeeldellpeleeekae 178
                 f +Y+ + + +k+ + ++   + +n++  ++ + +   + lle+L+eg+e+ n+e+ + ++   ++  + ++e+ ++l++++++
  KHJ33722.1   4 FNQYFLLADHIKLSLLERQVAIHSNTKSASQDSYL---SSLLESLREGIEKiNIEQSRLENLGDKDASQTIQEIQKNLQAQYDD 84 
                 56666666666666666666666666666666543...4555555555554223333333333334444555555555555544 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 5e-05
        Spc7 135 qllegLkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeL 201
                 q l++L ++++++ e   +   +L++q e ld + +++++++++l++++++l++ a++++++++ ++
  KHJ33722.1 193 QALDNLSKSIQRQRELSIQIGGELHEQVEILDGIDENVDRHQTRLRQTMKQLETTARNVKNSKQIKI 259
                 56777888888888888888889**************************************999776 PP

>> FUSC-like  FUSC-like inner membrane protein yccS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.4      0.28   7.2e+02     241     279 ..      38      80 ..      16      87 .. 0.59
   2 ?   14.1   3.5   7.4e-06     0.019     201     279 ..     174     253 ..     172     263 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.28
   FUSC-like 241 leraleeleqslellakq....nnekekellaalrallrnLrt 279
                 l+ +le+l++ +e+++ +    +n  +k++ + ++++ +nL++
  KHJ33722.1  38 LSSLLESLREGIEKINIEqsrlENLGDKDASQTIQEIQKNLQA 80 
                 4444444444444443222235666777777888888888775 PP

  == domain 2  score: 14.1 bits;  conditional E-value: 7.4e-06
   FUSC-like 201 afknsdvlfrfqrllelqakaceeiaqaillnkpyq.....hserleraleeleqslellakqnnekekellaalrallrnLrt 279
                 +f n+++l    r++++q +a+++++++i++++++         +  ++l++++++++     ++ + ++++++l++++rn+++
  KHJ33722.1 174 QFDNQQLLSYHSRIMNQQDQALDNLSKSIQRQRELSiqiggELHEQVEILDGIDENVDR----HQTRLRQTMKQLETTARNVKN 253
                 7999******************************9987766555556777777777777....56789999**********998 PP

>> RIFIN  Rifin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.2     0.076     2e+02     161     227 ..      44     110 ..      11     158 .. 0.54
   2 ?   11.6   5.6   7.1e-05      0.18     252     299 ..     227     274 ..     168     276 .] 0.64

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.076
       RIFIN 161 llkkllklselkekkleslitatnyknvtslvkaikeeyeescllklkkskaaltsakekekkeass 227
                  l++ ++  ++++++le+l ++   ++ +++ k ++++y++  ++  + + ++++s++ + ++++ss
  KHJ33722.1  44 SLREGIEKINIEQSRLENLGDKDASQTIQEIQKNLQAQYDDFITKFRDITPTKVMSNSLHINDAVSS 110
                 2222222222244556666666666666666666666666555553333333333333333333333 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 7.1e-05
       RIFIN 252 eaaaeataeaekaetaaveattaslqtaiiasivaivvIvLimvIIYL 299
                 +++ +  ++  +++++++e+t  +++++  + i+ai++ +L+++II L
  KHJ33722.1 227 DENVDRHQTRLRQTMKQLETTARNVKNSKQIKIIAILITILVILIIIL 274
                 44455556666778999************************9999944 PP

>> Med9  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.1     0.076     2e+02      17      36 ..      56      79 ..      37      90 .. 0.72
   2 ?    6.5   0.3    0.0034       8.6      52      72 ..     188     208 ..     180     213 .. 0.89
   3 ?    6.8   0.7    0.0028       7.3      40      70 ..     218     248 ..     214     256 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.076
        Med9 17 p....nlsskdletktgelrhkLk 36
                +    nl  kd ++ ++e+++ L+
  KHJ33722.1 56 QsrleNLGDKDASQTIQEIQKNLQ 79
                344556788888899999988877 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0034
        Med9  52 veeqeaeieeleeqlakKrel 72 
                 + +q++ +++l+++++++rel
  KHJ33722.1 188 MNQQDQALDNLSKSIQRQREL 208
                 579****************98 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0028
        Med9  40 elirelpgidrsveeqeaeieeleeqlakKr 70 
                 e+++ l+gid++v+  + ++++  +ql++  
  KHJ33722.1 218 EQVEILDGIDENVDRHQTRLRQTMKQLETTA 248
                 89999*********************99865 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   1.7    0.0057        15     169     256 ..      14      89 ..       2     118 .. 0.62
   2 ?   12.6   1.9   2.9e-05     0.073     121     245 ..      84     250 ..      82     267 .. 0.37

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0057
  Exonuc_VII_L 169 qrleklasrlk.speellerkrqrldeleerleralkkqlkkkrerleelkerl.kekleekkerlkklkerlelleekkerleeleekl 256
                    +l+ l+++++ +++++ +++ + l++l e+l++   ++++ +++rle+l ++  +++++e +++l+              +++  ++k 
    KHJ33722.1  14 IKLSLLERQVAiHSNTKSASQDSYLSSLLESLRE-GIEKINIEQSRLENLGDKDaSQTIQEIQKNLQ-------------AQYDDFITKF 89 
                   5666677777667777778888888888888887.55677788888888875443444444444443.............3333333333 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 2.9e-05
  Exonuc_VII_L 121 DfvAdlrapTPtaaAelvvpdkael.................eeqleelerrlekaikrll..................................ee 166
                   Df+ + r  TPt++ +  ++ ++ +                 +   ++            l                                  ++
    KHJ33722.1  84 DFITKFRDITPTKVMSNSLHINDAVssghvmetpersliglsT---KS------------LktsirgspntpitsktvrfsdspqrtnsslffpyRD 165
                   7888888888888888777444444554444444322222220...11............1111122222222222222222222222222222211 PP

  Exonuc_VII_L 167 kkqrle..kl.asrl.kspeellerkrqrldeleerleralkkq......lkkkrerleelkerlkekleekkerlkklkerlelleek 245
                   + + ++  ++ +++l +  +++++++ q+ld+l+++++r+ + +      l+++ e l+ +     e+++++++rl+++ ++le+++++
    KHJ33722.1 166 EPNSIDgsQFdNQQLlSYHSRIMNQQDQALDNLSKSIQRQRELSiqiggeLHEQVEILDGID----ENVDRHQTRLRQTMKQLETTARN 250
                   11111110111122212345555556666666666666643333222222222222222222....44444555554443444422222 PP

>> Synaptobrevin  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.3     0.082   2.1e+02      17      44 ..      43      72 ..      27      89 .. 0.73
   2 ?    5.6   9.9    0.0053        14      36      84 ..     216     273 ..     176     276 .] 0.47

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.082
                   CHHCCHHHHCHCCCCCHHHHCCC..CHHHH CS
  Synaptobrevin 17 dimkeNidkvlergekldeLvdk..tenLq 44
                   + ++e i+k+   + +l++L dk  ++++q
     KHJ33722.1 43 ESLREGIEKINIEQSRLENLGDKdaSQTIQ 72
                   567888999999999999998873345555 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0053
                    HCCCCHHHHHHHHHHHHHHHHHHHHHHHHTX.........XXXXXXXXXXXXXXXXXX CS
  Synaptobrevin  36 LvdktenLqssaqqFkkqarklkrkmwwknm.........kliiililvvlililiii 84 
                    L+++ e L    ++  ++ ++l+++m   +          +++ii il+ +++iliii
     KHJ33722.1 216 LHEQVEILDGIDENVDRHQTRLRQTMKQLETtarnvknskQIKIIAILITILVILIII 273
                    5555555555555555555555555543222233334443334444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1848  (0.103073); expected 358.6 (0.02)
Passed bias filter:                      754  (0.0420548); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.37
# Mc/sec: 2238.58
//
Query:       KHJ33723.1  [L=286]
Description: putative s-adenosylmethionine mitochondrial carrier protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.6e-45  151.2   9.5    4.7e-17   61.7   0.2    4.1  4  Mito_carr        Mitochondrial carrier protein
     0.0023   17.1   1.9      0.099   11.8   0.2    2.4  3  Serine_protease  Gammaproteobacterial serine protease


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   3.5e-09   3.1e-05       8      37 ..       3      32 ..       1      34 [. 0.93
   2 !   29.9   0.3   4.5e-11     4e-07      56      95 ..      35      74 ..      32      76 .. 0.93
   3 !   40.4   0.1   2.4e-14   2.1e-10       4      92 ..      99     187 ..      96     192 .. 0.82
   4 !   61.7   0.2   5.3e-21   4.7e-17       3      93 ..     197     281 ..     195     285 .. 0.93

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 3.5e-09
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC CS
   Mito_carr  8 ellaGglagavatlvttPldvvKtrlqtqk 37
                 ll+G+lag++  l  +Pld++Ktrlq+++
  KHJ33723.1  3 ALLSGALAGTTVDLSLYPLDTLKTRLQSSS 32
                689************************986 PP

  == domain 2  score: 29.9 bits;  conditional E-value: 4.5e-11
                HHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr 56 ykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95
                + + G++g yrG++ +++++ap +al f +ye++k l+  
  KHJ33723.1 35 IASGGFTGVYRGVGSAIVGSAPGAALFFCTYEFIKSLFSS 74
                6789********************************9975 PP

  == domain 3  score: 40.4 bits;  conditional E-value: 2.4e-14
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHH.HGGGTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGl.rglyrGllpnllrvapasalkfvlyetlkrl 92 
                  +l++++a++++ ++a  v  P+dv+K r q+ ++ss+    ++il   ++ +   G+ r lyrG++++++r +p ++++f l e++k +
  KHJ33723.1  99 APLQHIVAASFGEVAACAVRVPTDVIKQRAQAGQQSSSLVVLRSIL-SQRQAIGLSGVwRELYRGWTITVMREIPFTVIQFPLWESMKAY 187
                 5789****************************99998865554444.33444444444477**************************986 PP

  == domain 4  score: 61.7 bits;  conditional E-value: 5.3e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 ++++++ l G+++ga+a+ +ttPldv+Ktr+++ k++++      i + + +i+ ++G ++++ G+ p++l+++   a+ +++y+   ++l
  KHJ33723.1 197 ITAFESALFGSFSGAIAAGLTTPLDVLKTRMMLTKEKTN------IKSLFIQILSKNGPKAFFAGICPRILWISTGGAIFLGSYQWSFNYL 281
                 78899******************************9976......7889***********************************9877666 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.2   1.1e-05     0.099      15      67 ..      12      59 ..       2      68 .. 0.82
   2 ?   -3.7   0.0      0.57   5.1e+03      44      55 ..     153     164 ..     137     168 .. 0.73
   3 !    4.3   0.1    0.0021        19     176     205 ..     202     231 ..     185     242 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.1e-05
  Serine_protease 15 fsvsaltsPfkalLtnlqkdgsvlpsaysgGlfralYrGflayalagskrrav 67
                     ++v     P+ +l t+lq +  ++    sgG f ++YrG+++ a+ gs+ +a+
       KHJ33723.1 12 TTVDLSLYPLDTLKTRLQSSSGFIA---SGG-FTGVYRGVGS-AIVGSAPGAA 59
                     5566667899********9866665...678.99********.******9987 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 0.57
  Serine_protease  44 gGlfralYrGfl 55 
                       G+ r lYrG++
       KHJ33723.1 153 SGVWRELYRGWT 164
                      468999999986 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.0021
  Serine_protease 176 kllaGalsGviAtvlttifnsykDkkllas 205
                        l G  sG+iA+ ltt++  +k + +l+ 
       KHJ33723.1 202 SALFGSFSGAIAAGLTTPLDVLKTRMMLTK 231
                      556799***************999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       308  (0.0171789); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2117.88
//
Query:       KHJ33724.1  [L=105]
Description: hypothetical protein EV44_g3281 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (105 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       997  (0.0556082); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 803.43
//
Query:       KHJ33725.1  [L=444]
Description: hypothetical protein EV44_g3127 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.20s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 3495.12
//
Query:       KHJ33726.1  [L=290]
Description: hypothetical protein EV44_g3228 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       350  (0.0195214); expected 358.6 (0.02)
Passed bias filter:                      282  (0.0157287); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 2125.35
//
Query:       KHJ33727.1  [L=163]
Description: hypothetical protein EV44_g3908 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.17   11.7   1.0       0.39   10.6   0.3    1.9  2  DUF4817   Helix-turn-helix domain (DUF4817)


Domain annotation for each model (and alignments):
>> DUF4817  Helix-turn-helix domain (DUF4817)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.18   3.2e+03      18      28 ..      90     100 ..      85     101 .. 0.63
   2 ?   10.6   0.3   2.2e-05      0.39      11      33 ..     117     138 ..     116     145 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.18
     DUF4817  18 svtatqrafrr 28 
                   + + r+fr+
  KHJ33727.1  90 DTQDSMRKFRE 100
                 55667788876 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 2.2e-05
     DUF4817  11 aYykngesvtatqrafrrrFpnr 33 
                 +Yy+   +vta+   f++r+p +
  KHJ33727.1 117 IYYQGR-NVTAASASFNQRYPID 138
                 899988.**************44 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       844  (0.0470746); expected 358.6 (0.02)
Passed bias filter:                      600  (0.0334653); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.35
# Mc/sec: 1378.85
//
Query:       KHJ33728.1  [L=303]
Description: putative acyl binding family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.6e-23   81.2   0.0    8.9e-23   80.3   0.0    1.5  1  ACBP       Acyl CoA binding protein
      0.005   16.3   0.1      0.027   13.9   0.0    1.9  2  Rab5-bind  Rabaptin-like protein
  ------ inclusion threshold ------
      0.031   13.0   0.1      0.046   12.4   0.1    1.4  1  MSP1_C     Merozoite surface protein 1 (MSP1) C-terminus


Domain annotation for each model (and alignments):
>> ACBP  Acyl CoA binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.3   0.0   1.5e-26   8.9e-23       2      85 .]       7     101 ..       6     101 .. 0.88

  Alignments for each domain:
  == domain 1  score: 80.3 bits;  conditional E-value: 1.5e-26
                 HHHHHHHHHH.H....HSTS---HHHHHHHHHHHHHHHTSS--S..---.-TTSH........HHHHHHHHHHHTTT--HHHHHHHHHHHHHHHHC CS
        ACBP   2 eeFekavaavkklek.klkkkpsneeklelYglyKqateGdvnt..srP.saldf........kgkaKwdaWkalkglskeeAkkkYiellkelvk 85 
                 ++F +a+++vkk++k + + +p++e++l+lYglyKqa+eGdv+   +rP s+           k +aK+d+W++++g+s++eAk+kY+e l+e+++
  KHJ33728.1   7 RVFVHALNTVKKIPKaG-ALRPPPEDRLRLYGLYKQAMEGDVDGvmERPaSVGSGvyepedikKDRAKYDSWDSQRGISRTEAKRKYVEALIETMH 101
                 78********9999963.5678********************779559945444388889988999**************************9985 PP

>> Rab5-bind  Rabaptin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0     0.079   4.7e+02      16      60 ..      85     128 ..      46     146 .. 0.74
   2 !   13.9   0.0   4.5e-06     0.027     155     202 ..     204     251 ..     193     263 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.079
   Rab5-bind  16 eqEaelrdqvkklqellrraneqLekerkdkkeLedslkelseet 60 
                  +Ea+ r+ v +l e  +r+ +    +r    eLe   ++ ++++
  KHJ33728.1  85 RTEAK-RKYVEALIETMHRYANTTADARALVDELEFVWNQIKNNV 128
                 44554.455666666666666666666666666666666666655 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 4.5e-06
   Rab5-bind 155 eliesRtakdHlEekLkaEillLkeqiqaEkalkEnlEetlqleierl 202
                 el++ R + +H+  kL  E+  L+eqi + +  + +  +++++ i+r+
  KHJ33728.1 204 ELVKWRKSVEHTLVKLTTEVAALREQITSGREYRGKRRKSFAKWISRI 251
                 89********************************99999999988875 PP

>> MSP1_C  Merozoite surface protein 1 (MSP1) C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   7.7e-06     0.046     340     420 ..     170     249 ..      65     284 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.7e-06
      MSP1_C 340 dnedddeidqvatGeaesaaeenilsafeneydvvyl.kplagvykslkkqlekevstikedltdilnsrlkkrnyflevle 420
                 +++ddd i++ + G+ +  + +++l ++ ne++ + l k   +v ++l k l  ev +++e++t + + r k+r+ f + ++
  KHJ33728.1 170 KSQDDD-IERDINGRPIIIERDDVLFEGVNESKGIELvKWRKSVEHTLVK-LTTEVAALREQITSGREYRGKRRKSFAKWIS 249
                 466777.888899********************99761555667777765.899***********************87665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       806  (0.0449551); expected 358.6 (0.02)
Passed bias filter:                      685  (0.0382063); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.29s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2108.98
//
Query:       KHJ33729.1  [L=990]
Description: putative cytokinesis regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (990 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       702  (0.0391544); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 6764.08
//
Query:       KHJ33730.1  [L=490]
Description: putative f-box domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.4e-07   28.6   1.0    2.6e-06   27.2   1.0    1.8  1  F-box-like  F-box-like
     0.0004   20.2   1.6     0.0011   18.8   1.6    1.7  1  F-box       F-box domain


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   1.0   2.9e-10   2.6e-06       4      35 ..      17      48 ..      14      52 .. 0.91

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 2.9e-10
  F-box-like  4 LPdEiLlqIFsyLppsdLlrlalVCrrWrrva 35
                 P+E++l+I + L ++dLlrl+lVC +W++v 
  KHJ33730.1 17 VPHELCLKIVDELYLEDLLRLRLVCQSWYQVF 48
                6**********9999***************97 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   1.6   1.2e-07    0.0011       3      42 ..      14      53 ..      13      58 .. 0.90

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1.2e-07
                HHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHH CS
       F-box  3 lsrLPsevlrhILerLplsdllalrrVSkgwrilidsdrl 42
                +  +P e+ ++I   L l dll+lr+V+ +w+++ +s+ +
  KHJ33730.1 14 FNKVPHELCLKIVDELYLEDLLRLRLVCQSWYQVFCSIDI 53
                678999999**************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3693.64
//
Query:       KHJ33731.1  [L=303]
Description: putative powdery mildew-specific protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
     0.0045   15.9   0.5     0.0066   15.3   0.5    1.3  1  API5           Apoptosis inhibitory protein 5 (API5)
  ------ inclusion threshold ------
      0.012   15.3   2.9      0.023   14.4   2.9    1.4  1  ERK-JNK_inhib  ERK and JNK pathways, inhibitor
      0.051   13.8   5.8      0.059   13.5   3.9    2.1  2  K-box          K-box region
       0.11   12.4   1.0       0.21   11.5   1.0    1.4  1  DUF3439        Domain of unknown function (DUF3439)


Domain annotation for each model (and alignments):
>> API5  Apoptosis inhibitory protein 5 (API5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.5   1.5e-06    0.0066     123     172 ..      60     108 ..      46     155 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 1.5e-06
        API5 123 llkldakasltalfkqieteeetvRekvlkfireklftlkeellkpteem 172
                 l+ ld+++ l+ ++k++ +++++vR+k+++ i +++ ++k++  k + e+
  KHJ33731.1  60 LTSLDPATKLEKILKHLPQQQDVVRNKMIEIILDQIEEVKQKARK-ELEN 108
                 7889***********************************998873.3333 PP

>> ERK-JNK_inhib  ERK and JNK pathways, inhibitor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   2.9   5.2e-06     0.023      29      86 ..      71     127 ..      67     133 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5.2e-06
  ERK-JNK_inhib  29 kavksllkiddyekqyklveillkkilkvleeskekLekadilpesdfpkdeklkdAl 86 
                    k++k+l + +d   ++k++ei+l++i +v +++++ Le+++il+++   k+ek+++ l
     KHJ33731.1  71 KILKHLPQQQD-VVRNKMIEIILDQIEEVKQKARKELENNKILRDRLWAKEEKERERL 127
                    66788888777.6789**********************************99999866 PP

>> K-box  K-box region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   3.9   1.3e-05     0.059      44      92 ..      68     116 ..      58     116 .. 0.90
   2 ?   -3.4   0.0       2.6   1.2e+04      57      68 ..     188     199 ..     185     202 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.3e-05
       K-box  44 eLqqLEqqLekslkkiRsrKeqllleeieelkkkekqleeenkeLrekl 92 
                  L+++ ++L +    +R++  +++l++iee+k+k ++  e+nk Lr++l
  KHJ33731.1  68 KLEKILKHLPQQQDVVRNKMIEIILDQIEEVKQKARKELENNKILRDRL 116
                 577888888899999*******************************975 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.6
       K-box  57 kkiRsrKeqlll 68 
                 ++ R+ K+ql +
  KHJ33731.1 188 QNTRQIKDQLAQ 199
                 667777777765 PP

>> DUF3439  Domain of unknown function (DUF3439)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   1.0   4.7e-05      0.21      34      63 ..      37      67 ..      21      78 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.7e-05
     DUF3439 34 sgsgkpvrsiicptttttttttt.ttmpttt 63
                s s  pv+s++  t tttttt   t++  +t
  KHJ33731.1 37 SESTSPVQSLMSTTLTTTTTTHVlTSLDPAT 67
                78999****9988766666664413333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1327  (0.0740142); expected 358.6 (0.02)
Passed bias filter:                      625  (0.0348597); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2210.85
//
Query:       KHJ33732.1  [L=261]
Description: putative monothiol glutaredoxin-5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      3e-18   65.8   0.0    1.8e-17   63.3   0.0    2.3  3  Glutaredoxin  Glutaredoxin
    4.7e-08   33.0   0.0    1.5e-07   31.4   0.0    1.8  2  Thioredoxin   Thioredoxin


Domain annotation for each model (and alignments):
>> Glutaredoxin  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.35   3.1e+03      31      31 ..      65      65 ..      29      92 .. 0.49
   2 ?   -2.3   0.0      0.61   5.5e+03      35      52 ..     105     123 ..      98     125 .. 0.70
   3 !   63.3   0.0     2e-21   1.8e-17       1      60 []     178     242 ..     178     242 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.35
                  G CS
  Glutaredoxin 31 v 31
                  +
    KHJ33732.1 65 I 65
                  2 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.61
                   HHHHHHHHHHH.TSSSSSE CS
  Glutaredoxin  35 eeireelkels.gvrtvPq 52 
                   +++r+++++++  v++ P+
    KHJ33732.1 105 SKVRAAIEKNTnSVQAQPN 123
                   5889999999855555555 PP

  == domain 3  score: 63.3 bits;  conditional E-value: 2e-21
                   EEEEES.....TSSHHHHHHHHHHHHTTGGEEEEEGCCSHHHHHHHHHHHTSSSSSEEEETTEEE CS
  Glutaredoxin   1 vvlftk.....ptCpyCkkakrlLkelgvkfeeidvdkdeeireelkelsgvrtvPqvfidgkhv 60 
                   v+lf+k     p+C+++++++ lL+e+g+k+ ++++++de +r+ lke+++++t Pq++++g++v
    KHJ33732.1 178 VMLFMKgtpaaPQCGFSRQIVSLLRERGIKYGFFNILADETVRQGLKEFADWPTYPQLWVNGELV 242
                   89************************************************************987 PP

>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   1.6e-11   1.5e-07       6     101 ..      11     111 ..       7     113 .. 0.88
   2 ?   -3.6   0.0       1.3   1.1e+04      27      41 ..     188     202 ..     185     209 .. 0.77

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 1.6e-11
                  SHHHHHHHHTT..TSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTT....TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEESS-HHHHH CS
  Thioredoxin   6 tkenFeeevak..ekklvlveFyApwCghCkalaPeleklaeelkd....kvklakvdvdenedlakkyevegiPtlklfkngkevkkyegarekekl 97 
                  tke++++  ++  + +l ++ F  +w ++Ck ++ +le+la+ +          + vd++e  ++ + +++ ++P ++l ++ + +++++g+   +k+
   KHJ33732.1  11 TKEEWQAYASSipPTTLQIIYFKTEWAAPCKLMTTVLETLASSYPVtdplSTSWISVDAEEAIEVSDIFKIAAVPFVILRRDTQIIESISGSDA-SKV 107
                  677777777777679999**************************9888999999********************************99999876.666 PP

                  HHHH CS
  Thioredoxin  98 aafl 101
                  +a +
   KHJ33732.1 108 RAAI 111
                  6665 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 1.3
                  -TTSHHHHCHHHHHH CS
  Thioredoxin  27 ApwCghCkalaPele 41 
                  Ap Cg  +++ + l 
   KHJ33732.1 188 APQCGFSRQIVSLLR 202
                  889999998877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       977  (0.0544927); expected 358.6 (0.02)
Passed bias filter:                      628  (0.0350271); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 1960.97
//
Query:       KHJ33733.1  [L=1564]
Description: putative wd40 repeat-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-06   27.3   0.0    3.9e-06   26.1   0.0    1.6  1  Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping prot


Domain annotation for each model (and alignments):
>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.1   0.0   2.2e-10   3.9e-06     175     324 ..     714     876 ..     696     880 .. 0.81

  Alignments for each domain:
  == domain 1  score: 26.1 bits;  conditional E-value: 2.2e-10
    Ge1_WD40 175 eeieegllkieehsliveaafspdGtalatasedGevkffqvylede...............eeprCLheWkPhdGksl.ssllfldnhkeesdeqfWr 257
                 + +++  lki+    + + +fs d t++a   + G +kf+ +    +               ++p  + +  P   ks  +s++f+d+++        r
  KHJ33733.1 714 SYMKHNSLKINTGKAVKDFTFSEDDTTIASLDKAGRIKFWDIRGLTKreisypssdlqqtevKNPIVIFNSTPTIEKSRpTSIIFVDKIRPYQRGGALR 812
                 34566899**********************************866555789999999999999999*******988764389*********9999**** PP

    Ge1_WD40 258 faitgadnnselklWscelWtClqtikfapsiesslkaevlkaeldlsaeyLllsdlkrkvlyvlql 324
                 ++i g  +n+ l+lW  +l + +q i++  s   s +  +  +    s+  +++   +r+ +y l+l
  KHJ33733.1 813 YLIIGMMQNHTLQLWDISLGKTVQEINLPHS---SDSDAICSVVYHASTGMIVVGHPTRNSIYFLHL 876
                 **************************98666...334444455556666666666666667776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1564 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1200  (0.0669307); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.87u 0.25s 00:00:01.12 Elapsed: 00:00:00.41
# Mc/sec: 11440.06
//
Query:       KHJ33734.1  [L=356]
Description: hypothetical protein EV44_g3426 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00046   20.6   3.2    0.00093   19.6   3.2    1.5  1  eIF3g      Eukaryotic translation initiation factor 3 subunit
  ------ inclusion threshold ------
       0.27   11.2   5.1       0.74    9.8   5.1    1.8  1  zf-CCHC_3  Zinc knuckle


Domain annotation for each model (and alignments):
>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   3.2     1e-07   0.00093      73     123 ..     176     225 ..     137     227 .. 0.68

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 1e-07
       eIF3g  73 eevelkleeekeeekeeeekekaklkkkekklvkCriCk.gdHfTskCPykd 123
                 e  + ++e+++   +++++  k  ++k  +k+v+C  Ck   HfT kCP ++
  KHJ33734.1 176 ESCNTQIEKDE--YSKKKQYGKGDINKDGRKIVRCCKCKgKGHFTNKCPKRN 225
                 44444554333..3344555555566457789******9567*******876 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   5.1   8.3e-05      0.74       5      28 ..     206     227 ..     203     237 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 8.3e-05
   zf-CCHC_3   5 aaCQkClkkGHwtYECknagerky 28 
                 ++C kC +kGH+t  C++  ++k 
  KHJ33734.1 206 VRCCKCKGKGHFTNKCPK--RNKE 227
                 59***************5..4433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       598  (0.0333538); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.19s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2892.34
//
Query:       KHJ33735.1  [L=248]
Description: hypothetical protein EV44_g2573 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1900.88
//
Query:       KHJ33736.1  [L=174]
Description: hypothetical protein EV44_g3377 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       675  (0.0376485); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1342.30
//
Query:       KHJ33737.1  [L=432]
Description: putative 37s ribosomal protein s5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.7e-19   67.9   0.0    7.1e-19   67.0   0.0    1.5  1  Ribosomal_S5_C  Ribosomal protein S5, C-terminal domain
    6.3e-15   54.9   0.4    1.3e-14   53.9   0.4    1.6  1  Ribosomal_S5    Ribosomal protein S5, N-terminal domain


Domain annotation for each model (and alignments):
>> Ribosomal_S5_C  Ribosomal protein S5, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.0   0.0   7.9e-23   7.1e-19       2      72 .]     346     416 ..     345     416 .. 0.98

  Alignments for each domain:
  == domain 1  score: 67.0 bits;  conditional E-value: 7.9e-23
                     EEETTEEEEEEE--TT--EES-HHHHHHHHHHT--SEE---BS-SSHHHHHHHHHHHHHHTTTT-.-GGGG CS
  Ribosomal_S5_C   2 gkfgavkvllkpaprGtGiiaggavravlelaGikDvlakslgsrnpinvvkAtfeALkklrspeevaalR 72 
                     +k++av+v+l+++p+G+G+++++ ++++ ++aGi+D+ a++   rn++n+ kA+++AL ++  p+e+a+ R
      KHJ33737.1 346 AKVSAVRVKLMSRPPGFGLRCQHLIFEMARAAGIDDLAARVPHARNKMNTCKAAYKALLSQFIPDEIARGR 416
                     6999****************************************************************987 PP

>> Ribosomal_S5  Ribosomal protein S5, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.4   1.5e-18   1.3e-14       2      65 .]     270     333 ..     269     333 .. 0.98

  Alignments for each domain:
  == domain 1  score: 53.9 bits;  conditional E-value: 1.5e-18
                   EEEEEEEEEEEEEETTEEEEEEEEEEEEEETTTEEEEEEEEESSHHHHHHHHHHHHHHTEEE-- CS
  Ribosomal_S5   2 kekvlkikrvqkvtkgGrrtsfsalvvvGdgnGlvGlGvgkakevatAirkAiekAkknlvpvp 65 
                   k kvl+ +rv+++t+ G++   ++l+++G+g+G++GlG++k+ +  + ++ A++ A+kn+ p+p
    KHJ33737.1 270 KVKVLVQHRVSNQTRLGKVPGQYVLAIAGNGDGRLGLGEAKGGDGGQTVNLAKISAIKNMKPIP 333
                   78************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 3366.73
//
Query:       KHJ33738.1  [L=100]
Description: putative dash complex subunit dad3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.1e-30  103.4   0.1    6.5e-30  103.0   0.1    1.1  1  DASH_Dad3  DASH complex subunit Dad3


Domain annotation for each model (and alignments):
>> DASH_Dad3  DASH complex subunit Dad3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.0   0.1   3.6e-34   6.5e-30       1      71 [.      22      92 ..      22      94 .. 0.97

  Alignments for each domain:
  == domain 1  score: 103.0 bits;  conditional E-value: 3.6e-34
   DASH_Dad3  1 LspleqevLdeYerLaenlktLaselkeLasnsteeildgLReLErkiglvyTLlKaSVYsivlqqeedee 71
                L+pleq+v +eYerLa+n+ ++as lk++ +++ +e+ldgLR+LErk+glv+TLlKaSVYsivlqqe++++
  KHJ33738.1 22 LTPLEQDVIEEYERLARNMSKFASVLKDMGEKPITEVLDGLRQLERKTGLVFTLLKASVYSIVLQQEIYSG 92
                89*****************************************************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (100 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.27s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 750.50
//
Query:       KHJ33739.1  [L=557]
Description: putative g2 m phase checkpoint control protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-28   98.5   0.0    3.1e-28   97.7   0.0    1.5  1  LSM14     Scd6-like Sm domain
    8.2e-15   55.6   6.2    8.2e-15   55.6   6.2    3.2  3  FDF       FDF domain
    3.7e-06   27.0   0.0    7.7e-06   26.0   0.0    1.6  1  SM-ATX    Ataxin 2 SM domain
  ------ inclusion threshold ------
        2.2    9.0   8.4        5.4    7.8   8.4    1.6  1  GRP       Glycine rich protein family


Domain annotation for each model (and alignments):
>> LSM14  Scd6-like Sm domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.7   0.0     7e-32   3.1e-28       1      74 [.       3      76 ..       3      77 .. 0.98

  Alignments for each domain:
  == domain 1  score: 97.7 bits;  conditional E-value: 7e-32
       LSM14  1 efIGskislisksdirYeGilceinledstiaLqnvrsfGtegrkdneqippskevyeyivFrgsDikdLevle 74
                efIG++isl+sksdirY+G+l+ein+e st+aL+nv++ Gtegr+  +++ +++ +yeyi+Frg+D+kdL+++e
  KHJ33739.1  3 EFIGARISLVSKSDIRYVGTLHEINSETSTVALENVTMLGTEGRRPDNEVAALDSIYEYILFRGTDVKDLRIEE 76
                69******************************************99999***********************87 PP

>> FDF  FDF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       3.9   1.7e+04      41      71 ..     237     274 ..     222     281 .. 0.59
   2 ?    0.1   0.3      0.34   1.5e+03      49      85 ..     367     403 ..     340     410 .. 0.75
   3 !   55.6   6.2   1.8e-18   8.2e-15       3     103 ..     418     509 ..     416     510 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 3.9
                 ........XXXXXXXXXXXXXXXXXXXBXXBXXXXXXX CS
         FDF  41 n.......aatatatneqpgekvegvdkkksffDkiSs 71 
                 +       +a++  ++  ++    +v +k s +D +S+
  KHJ33739.1 237 TsgskgllKAAEMPAAPVQKIATPPVTAKLSTIDAKSD 274
                 13333555666666666666777777777777777775 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.34
                 XXXXXXXXXXXXBXXBXXXXXXXEEEXTTXXEEEXXX CS
         FDF  49 neqpgekvegvdkkksffDkiSsegnergaqehesee 85 
                 +++ g k+ + + +ks+  + S+ ++++++++h+ ++
  KHJ33739.1 367 DDNKGHKNPIKNYRKSSKSNASACAERTSRGNHKANG 403
                 4566777777778888888999999999999887665 PP

  == domain 3  score: 55.6 bits;  conditional E-value: 1.8e-18
                 SSS---HCCCCCTSSCCHHCCHHHCC-XXXXXXXXXX..XXXXXXXXXXXXXXXXXXXBXXBXXXXXXXEEEXTTXXEEEXXXHHHHHHHHHHH..HHT CS
         FDF   3 feeDFDFesanakFnkkevfeellkkaklkeeklaknenaatatatneqpgekvegvdkkksffDkiSsegnergaqeheseedddwreerklnt.etf 100
                 + eDFDF+sanakFnk+++ +e++  a + +  + k              +e+   ++k  sffD+iSse ++r++  ++++++++wr+e+++++ etf
  KHJ33739.1 418 PPEDFDFQSANAKFNKEDLIKEAISAAPITKSGPGK----------SPVENETPATYNKATSFFDNISSEVKDREEAGNTRPGGRKWRGEEQKKNlETF 506
                 569***********************9999966664..........34445556679999*********************************999*** PP

                 TXX CS
         FDF 101 Gvs 103
                 G +
  KHJ33739.1 507 GEE 509
                 *86 PP

>> SM-ATX  Ataxin 2 SM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   1.7e-09   7.7e-06       8      80 ..       1      74 [.       1      75 [. 0.92

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 1.7e-09
                HHTTTTSEEEEEETTS-EEEEEEEEE-T..T--EEEEEEEETTS.............-EEEEEEE-GGGEEEEXX CS
      SM-ATX  8 ltslvGkevevtvknGevyeGifstvslekdfsvvLkmarkvkkans..kssspssgeipdtliikakdivdiea 80
                +t ++G ++++  k++ +y G ++ +++   + v+L+++  + +++   +++    ++i++ +++++ d+ d+ +
  KHJ33739.1  1 MTEFIGARISLVSKSDIRYVGTLHEINS-ETSTVALENVTMLGTEGRrpDNEVAALDSIYEYILFRGTDVKDLRI 74
                689*************************.799************4445699*******************99865 PP

>> GRP  Glycine rich protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   8.4    0.0012       5.4      19      78 ..     474     537 ..     468     554 .. 0.56

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0012
         GRP  19 issevaaael........skeeksekeeevkdekyggggkh...ggGgygggggggngGGGykgggGgygg 78 
                 issev+ +e+            k   ee+ k+ + +g  +    ++Ggy g g+g+   GGy +g+G+ ++
  KHJ33739.1 474 ISSEVKDREEagntrpggR---KWRGEEQKKNLETFGEESIdnnHRGGYRGRGRGR---GGY-RGRGYSRN 537
                 7788888877555553222...3333344444444443332455889999988877...665.44455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (557 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       439  (0.0244855); expected 358.6 (0.02)
Passed bias filter:                      216  (0.0120475); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 4117.80
//
Query:       KHJ33740.1  [L=806]
Description: putative pumilio-family rna binding repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.8e-34  113.3   6.2    5.3e-05   22.7   0.0    9.6 10  PUF           Pumilio-family RNA binding repeat
  ------ inclusion threshold ------
      0.025   15.3   0.1       0.12   13.2   0.0    2.1  3  RraB          Regulator of ribonuclease activity B
      0.097   12.9   0.0       0.76   10.0   0.0    2.3  2  RasGEF        RasGEF domain
       0.16   10.8   3.1        8.3    5.2   2.1    2.1  2  Spc7          Spc7 kinetochore protein
       0.62    9.1   4.9        2.8    6.9   2.7    2.2  2  Atg14         Vacuolar sorting 38 and autophagy-related subun
        1.2    9.5   4.5         14    6.0   0.3    2.4  2  ABC_tran_CTD  ABC transporter C-terminal domain


Domain annotation for each model (and alignments):
>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.27     8e+02       2      16 ..      44      58 ..      43      59 .. 0.92
   2 ?    1.3   0.3      0.11   3.2e+02      11      31 ..     457     477 ..     452     481 .. 0.85
   3 !   22.7   0.0   1.8e-08   5.3e-05       8      32 ..     490     514 ..     484     517 .. 0.87
   4 !   21.3   0.0   4.9e-08   0.00015       2      33 ..     520     550 ..     519     552 .. 0.88
   5 !    5.6   0.0    0.0046        14      11      24 ..     565     578 ..     559     584 .. 0.89
   6 !    7.2   0.0    0.0014       4.3       8      28 ..     602     622 ..     596     629 .. 0.76
   7 !    9.1   0.0   0.00037       1.1      13      31 ..     643     661 ..     640     665 .. 0.88
   8 !   14.2   0.0   8.7e-06     0.026       8      31 ..     674     697 ..     668     701 .. 0.79
   9 !   22.6   0.0   1.8e-08   5.5e-05       6      28 ..     716     738 ..     716     744 .. 0.82
  10 ?   -2.0   0.0       1.3   3.8e+03       3      18 ..     749     764 ..     748     764 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.27
                HGGGHHHHHTSTTHH CS
         PUF  2 ikgnlvqLstdqyGn 16
                +k+++++Ls+ + Gn
  KHJ33740.1 44 LKKSVTTLSSSKLGN 58
                799*********998 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.11
                 TSTTHHHHHHHHHHHSCHHHH CS
         PUF  11 tdqyGnyvvQkllehateeqk 31 
                 +dq ++ ++Q+ l++ t+eqk
  KHJ33740.1 457 NDQQASIFLQQKLKVGTLEQK 477
                 5888999********999998 PP

  == domain 3  score: 22.7 bits;  conditional E-value: 1.8e-08
                 HHHTSTTHHHHHHHHHHHSCHHHHH CS
         PUF   8 qLstdqyGnyvvQkllehateeqkk 32 
                  L+++++Gn++vQ+++eh t+ q+ 
  KHJ33740.1 490 PLMVNRFGNFLVQRCFEHGTPAQVI 514
                 69****************9999875 PP

  == domain 4  score: 21.3 bits;  conditional E-value: 4.9e-08
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkkl 33 
                 i+g  + Ls d +G++vvQk ++ +++e++k 
  KHJ33740.1 520 IRGQTLNLSMDAFGCHVVQKAFD-SVPEDYKA 550
                 6788899****************.99999885 PP

  == domain 5  score: 5.6 bits;  conditional E-value: 0.0046
                 TSTTHHHHHHHHHH CS
         PUF  11 tdqyGnyvvQklle 24 
                 +++y+++v Qkl+e
  KHJ33740.1 565 IHRYACHVWQKLFE 578
                 79***********9 PP

  == domain 6  score: 7.2 bits;  conditional E-value: 0.0014
                 HHHTSTTHHHHHHHHHHHSCH CS
         PUF   8 qLstdqyGnyvvQkllehate 28 
                 + +    G+ vvQ+++e + e
  KHJ33740.1 602 EVALGETGSLVVQNIFENCLE 622
                 5666678**********9866 PP

  == domain 7  score: 9.1 bits;  conditional E-value: 0.00037
                 TTHHHHHHHHHHHSCHHHH CS
         PUF  13 qyGnyvvQkllehateeqk 31 
                 q+Gn+ +Q++ eh ++ ++
  KHJ33740.1 643 QFGNWCIQHICEHGVPADR 661
                 9************988776 PP

  == domain 8  score: 14.2 bits;  conditional E-value: 8.7e-06
                 HHHTSTTHHHHHHHHHHHSCHHHH CS
         PUF   8 qLstdqyGnyvvQkllehateeqk 31 
                 ++s dq+++ vv+k+l+  ++e  
  KHJ33740.1 674 EYSMDQFASKVVEKCLKIGGSEFL 697
                 7888************99655554 PP

  == domain 9  score: 22.6 bits;  conditional E-value: 1.8e-08
                 HHHHHTSTTHHHHHHHHHHHSCH CS
         PUF   6 lvqLstdqyGnyvvQkllehate 28 
                 l+++++dqyGny++Q++l+h+ +
  KHJ33740.1 716 LIEIASDQYGNYLIQYILTHSNP 738
                 579****************7554 PP

  == domain 10  score: -2.0 bits;  conditional E-value: 1.3
                 GGGHHHHHTSTTHHHH CS
         PUF   3 kgnlvqLstdqyGnyv 18 
                 +++ v+L   ++G++v
  KHJ33740.1 749 RKHMVSLRGSKFGSRV 764
                 56777777789***98 PP

>> RraB  Regulator of ribonuclease activity B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0         6   1.8e+04      34      54 ..      79      99 ..      74     109 .. 0.65
   2 ?   13.2   0.0   3.9e-05      0.12       8      49 ..     649     690 ..     646     699 .. 0.90
   3 ?   -3.7   0.0         6   1.8e+04      21      45 ..     726     750 ..     720     754 .. 0.67

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 6
        RraB 34 edlekfaeeleklgyevedae 54
                + +ek++++l++++  +++  
  KHJ33740.1 79 DPMEKLLAKLSQQQAAINQQH 99
                567777777777666555444 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 3.9e-05
        RraB   8 ldalledGddldkpreiehhfyfedeedlekfaeeleklgye 49 
                 ++++ e+G+  d++r i+h +  ++e  +++fa ++ ++ ++
  KHJ33740.1 649 IQHICEHGVPADRSRAIDHVIRYASEYSMDQFASKVVEKCLK 690
                 78999*****************************99887655 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 6
        RraB  21 preiehhfyfedeedlekfaeelek 45 
                 ++ i++ +  ++ +  e +a++++k
  KHJ33740.1 726 NYLIQYILTHSNPQHREIVAQHIRK 750
                 5667777777777777766666655 PP

>> RasGEF  RasGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   0.00025      0.76      34      76 ..     627     674 ..     554     685 .. 0.75
   2 ?   -0.6   0.0      0.45   1.3e+03      44      72 ..     722     750 ..     685     758 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00025
      RasGEF  34 pnveaviarfnrls.....nwvaseilseeslkkRakviekfikiake 76 
                 p +e v+a ++ ++     nw+++ i+++  + +R ++i ++i+ a e
  KHJ33740.1 627 PCIEEVLASIDIVAhgqfgNWCIQHICEHGVPADRSRAIDHVIRYASE 674
                 3344433333333333344*************************9986 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.45
      RasGEF  44 nrlsnwvaseilseeslkkRakviekfik 72 
                 ++  n++++ il+++++++R  v +++ k
  KHJ33740.1 722 DQYGNYLIQYILTHSNPQHREIVAQHIRK 750
                 5667899999**********888777655 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   2.1    0.0028       8.3     162     242 ..      25     105 ..      14     113 .. 0.82
   2 ?    4.4   0.0     0.005        15     199     240 ..     156     197 ..     124     203 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0028
        Spc7 162 eeel..dellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeq 242
                 ++ l  del+ +le++ a l++ +++l + +   ++  +++L +l++++++ ++e +  +k la+l +q ++++++ e+l+++
  KHJ33740.1  25 NSGLngDELVSSLEQNDALLKKSVTTLSSSK-LGNQAAPKKL-KLKHDISSGSSESDPMEKLLAKLSQQQAAINQQHEALRSS 105
                 54443489999****************9954.3456668888.69******************************99999876 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.005
        Spc7 199 eeLeelreelaelkaeieekkkelaelqeqleeleekieelk 240
                  eL  l+ el+++k +i++  +ela+ +  + +l+++i +++
  KHJ33740.1 156 GELTRLKFELEAAKGKIARMDQELAQTRITKHTLDQAIGSAS 197
                 589999999999999999999999999999999999887765 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   2.7   0.00095       2.8      35     122 ..      37     121 ..      30     125 .. 0.83
   2 ?    2.0   0.0     0.031        91      90     129 ..     158     197 ..     143     280 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.00095
       Atg14  35 ksekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklk.kRrsdleslq 122
                 ++++++l kk    l++ +    l +++  kk kl+   s  ++ ++ +++l +klsq++++i+++ + l++ +d++   R++d +s++
  KHJ33740.1  37 LEQNDALLKKSVTTLSSSK----LGNQAAPKKLKLKHDISSGSSESDPMEKLLAKLSQQQAAINQQHEALRSSDDSITySRTADYASAS 121
                 5677888888888888888....6777788888888888888888889****************************9977999988876 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.031
       Atg14  90 lsqlkkeieekkkklaklsdklkkRrsdleslqneleerr 129
                 l++lk e+e++k k+a+++++l++ r +   l + + ++ 
  KHJ33740.1 158 LTRLKFELEAAKGKIARMDQELAQTRITKHTLDQAIGSAS 197
                 6778889999999999999999988877666666665555 PP

>> ABC_tran_CTD  ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.3    0.0046        14      27      60 ..      67     102 ..      61     104 .. 0.76
   2 ?    4.5   0.4     0.014        42       6      26 ..     161     181 ..     157     191 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0046
  ABC_tran_CTD  27 leaeladpelysdp.ek.laelsaeleeleaeLeel 60 
                   l   +++ +  sdp ek la+ls+++++++++ e+l
    KHJ33740.1  67 LKHDISSGSSESDPmEKlLAKLSQQQAAINQQHEAL 102
                   566667777778887555999999999999999876 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.014
  ABC_tran_CTD   6 eqreleeleaeIeaLEeeiae 26 
                    ++ele+   +I+++++e+a+
    KHJ33740.1 161 LKFELEAAKGKIARMDQELAQ 181
                   689999999999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (806 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       759  (0.0423336); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 5597.78
//
Query:       KHJ33741.1  [L=203]
Description: hypothetical protein EV44_g2537 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-19   68.8   3.0    5.1e-19   67.8   3.0    1.5  1  DUF5572   Family of unknown function (DUF5572)


Domain annotation for each model (and alignments):
>> DUF5572  Family of unknown function (DUF5572)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.8   3.0   2.9e-23   5.1e-19       1      47 [.     120     166 ..     120     167 .. 0.98

  Alignments for each domain:
  == domain 1  score: 67.8 bits;  conditional E-value: 2.9e-23
     DUF5572   1 pyplsFaelveLIesGkpIPgIkqIPdtvleaqpsestaprRkKPWE 47 
                 pyp sFae+++LI+++ pIPgI++IP+tv+++q+s ++ap RkKPW+
  KHJ33741.1 120 PYPPSFAEIISLIAKNSPIPGIRDIPSTVIPEQASVAVAPMRKKPWD 166
                 8*********************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1582.43
//
Query:       KHJ33742.1  [L=871]
Description: putative glycoprotease family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.32   11.4   0.0       0.32   11.4   0.0    2.5  3  DUF5301   Domain of unknown function (DUF5300)


Domain annotation for each model (and alignments):
>> DUF5301  Domain of unknown function (DUF5300)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2      0.35   6.3e+03      46      70 ..      18      42 ..      14      61 .. 0.67
   2 ?   -2.5   0.2      0.41   7.3e+03      23      39 ..     189     207 ..     160     260 .. 0.55
   3 ?   11.4   0.0   1.8e-05      0.32      29      82 ..     752     808 ..     743     811 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.35
     DUF5301 46 kktkkeSvndqPnvdeyikvkleek 70
                +  +  S+  +P++++ + v+ + k
  KHJ33742.1 18 NVASSTSKTQDPEIKKSYQVEEKLK 42
                5556677777777777777765554 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.41
     DUF5301  23 ketev..kvtdkeeIkeil 39 
                 k+tev    +++ +I++ +
  KHJ33742.1 189 KNTEVksVTSSTPQIQRAM 207
                 3333321222333343333 PP

  == domain 3  score: 11.4 bits;  conditional E-value: 1.8e-05
     DUF5301  29 vtdkeeIkeilsilkkakktkkeSvndqP.nvdeyikvkleekekee..stlylYee 82 
                  t k++I+++ + ++++k+t+k++v  qP ++   i++++  + ++   +tly Y+ 
  KHJ33742.1 752 WTRKKSIHRFNHTFNQEKDTAKNTVLQQPgSFPYPITITIDRHGGNPmtKTLYCYKL 808
                 57899************************9999999****99988775589999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (871 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       766  (0.0427241); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 6137.77
//
Query:       KHJ33743.1  [L=227]
Description: hypothetical protein EV44_g5154 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       729  (0.0406604); expected 358.6 (0.02)
Passed bias filter:                      212  (0.0118244); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1682.19
//
Query:       KHJ33744.1  [L=527]
Description: hypothetical protein EV44_g1158 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.03   14.2   7.5      0.053   13.4   7.5    1.3  1  RIFIN     Rifin
      0.038   14.3   0.5      0.096   13.0   0.5    1.7  1  Orf78     Orf78 (ac78)


Domain annotation for each model (and alignments):
>> RIFIN  Rifin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   7.5     6e-06     0.053     183     312 ..     122     245 ..      78     250 .. 0.59

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 6e-06
       RIFIN 183 tnyknvtslvkaikeeyeescllklkkskaaltsakekekkeasskekikkkvekivekaekkaaaaaaeaaaeataeaekaetaaveattaslqtaii 281
                  + +  +  ++ + ++ + ++  ++++++  ++++ ++  +++ s++++ ++++++ ++ ++ka+a+ a+++++a a++++++taa+++t   l+ +  
  KHJ33744.1 122 ASVALSSATSSLLMAQLSMNS--AVSAAERSASIMVASAVDSVASANAAANEARAMLANEIQKAEASIASNNQAARASIIASQTAAMNTTKFALSLTFA 218
                 222223333333333332222..2333333334455556666667777888899999999999999999999999999******999999888877666 PP

       RIFIN 282 asivaivvIvLimvIIYLiLRYrRKkKmkkK 312
                 +    iv I    +  YLi+R r+++  k++
  KHJ33744.1 219 ILGSSIVTI----ISFYLIMRLRKRRTEKRQ 245
                 555555555....457999998776665554 PP

>> Orf78  Orf78 (ac78)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.5   1.1e-05     0.096      34      98 ..     178     243 ..     144     248 .. 0.64

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.1e-05
       Orf78  34 aenkkekksaaeknditekesn......aaekaqalnillisllavvcvl..vllyviyYfvilrerqkssvk 98 
                 +e +k ++s+a++n       +       a++++a+n   ++l   +++l   ++ +i++++i+r r+++++k
  KHJ33744.1 178 NEIQKAEASIASNN-------QaarasiIASQTAAMNTTKFALSLTFAILgsSIVTIISFYLIMRLRKRRTEK 243
                 22222222333333.......133455557888888888888888888875579************9988764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (527 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1527  (0.0851693); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 3589.39
//
Query:       KHJ33745.1  [L=490]
Description: putative kh domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-08   32.2   0.0      3e-05   23.8   0.0    2.7  2  KH_1      KH domain


Domain annotation for each model (and alignments):
>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0   0.00073        13      18      66 .]     149     205 ..     148     205 .. 0.77
   2 !   23.8   0.0   1.7e-09     3e-05      12      64 ..     257     319 ..     246     321 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.00073
                 GGHHHHHHHHHHT-EEEEES.STT..........T.-EEEEEE.SHHHHHHHHHHHHH CS
        KH_1  18 gGsnIkeIreetgakIkvpk.sedeg.......sderevtisG.speavekAkeliee 66 
                 +Gs+ k I++etga ++  + +  ++       +++  ++++  ++++ ekA+++iee
  KHJ33745.1 149 KGSTQKMIKDETGADVT-TRgNYYPDktmattaNPPLYLHVTStTKQGLEKAVAKIEE 205
                 89**************9.5324333367888877777788888888889999998875 PP

  == domain 2  score: 23.8 bits;  conditional E-value: 1.7e-09
                 HHHHTGGGHHHHHHHHHHT-EEEEESSTT.............T.-EEEEEE.SHHHHHHHHHHH CS
        KH_1  12 griIGkgGsnIkeIreetgakIkvpksedeg..........sderevtisG.speavekAkeli 64 
                   ++G gG+ +k+I++et +++++ + + +g          +++  +++ G +p  v+kAk+l 
  KHJ33745.1 257 AQVVGHGGAYVKHIQQETRCRVQIKG-RGSGfmehgtgqesDEPMYLHVAGpDPVEVQKAKDLC 319
                 5799*******************984.4444569999*977777778889*99999****9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       991  (0.0552736); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 3305.91
//
Query:       KHJ33746.1  [L=559]
Description: putative trna-splicing endonuclease subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-20   73.6   1.0    3.4e-20   71.9   1.0    1.9  1  tRNA_int_endo    tRNA intron endonuclease, catalytic C-termin
    2.5e-07   30.2   0.0     0.0004   20.0   0.0    2.6  2  tRNA_int_endo_N  tRNA intron endonuclease, N-terminal domain
  ------ inclusion threshold ------
      0.075   13.4   0.2       0.17   12.2   0.2    1.6  1  DUF4188          Domain of unknown function (DUF4188)


Domain annotation for each model (and alignments):
>> tRNA_int_endo  tRNA intron endonuclease, catalytic C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.9   1.0   5.8e-24   3.4e-20       1      78 [.     425     520 ..     425     524 .. 0.98

  Alignments for each domain:
  == domain 1  score: 71.9 bits;  conditional E-value: 5.8e-24
                    HHHHHHHHHHHHHTT-EEEECGGGTSSEEEETSCTTTSSCSEEEEEEETTSEE..................EHHHHHHHHHHHHHTTSEEEEEEET CS
  tRNA_int_endo   1 falkyavyrdLrekGyvvrsGlkFGadFrvYqrrpslehseylVvvvsedeel..................dwpdlsaavrlahsvkKklilaivd 78 
                    f ++y+vy+++r+ G+vvrsG+kF  d+++Y+r+p ++h+e+ V++++  ++                   +w  ls   r++ +vkK+l+l++vd
     KHJ33746.1 425 FMINYVVYHHFRSLGWVVRSGIKFSVDYLLYNRGPVFSHAEFSVLILPAYSHSywtstmslaeysrqkqhrTWAWLSCINRVISQVKKTLVLCYVD 520
                    789*************************************************9*****************************************97 PP

>> tRNA_int_endo_N  tRNA intron endonuclease, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0   0.00056       3.3       5      30 ..      86     111 ..      84     138 .. 0.85
   2 !   20.0   0.0   6.6e-08    0.0004      31      57 ..     363     390 ..     318     400 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00056
                      EETTEEEESSHHHHHHHHHTTT-SEE CS
  tRNA_int_endo_N   5 LsgdrvlvedeeaakrlyekgfYGkp 30 
                      L+ ++v+v     ++ l e+gfYGk 
       KHJ33746.1  86 LETRSVHVTEVRSIRGLWEQGFYGKG 111
                      78899*******************95 PP

  == domain 2  score: 20.0 bits;  conditional E-value: 6.6e-08
                      CCTSSEEEEHHHHHHHHHT.TSEEEETT CS
  tRNA_int_endo_N  31 lidepLqLslvEAlYLlek.Gklevvkg 57 
                      +++e LqL+++EA++L ++ G+l++ ++
       KHJ33746.1 363 RNEEHLQLTFEEAFFLSYAlGCLNIIET 390
                      67899*******************9854 PP

>> DUF4188  Domain of unknown function (DUF4188)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   2.9e-05      0.17      54      80 ..     474     499 ..     460     515 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.9e-05
     DUF4188  54 llvqYwrdvesLeafakseeHreawrk 80 
                 +  +Yw ++ sL +++++++Hr++ ++
  KHJ33746.1 474 YSHSYWTSTMSLAEYSRQKQHRTW-AW 499
                 5679*****************985.33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (559 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 4009.96
//
Query:       KHJ33747.1  [L=1496]
Description: putative 3-dehydroshikimate dehydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-08   33.5   2.8    2.2e-06   27.6   0.0    4.1  4  POT1      Telomeric single stranded DNA binding POT1/CDC13


Domain annotation for each model (and alignments):
>> POT1  Telomeric single stranded DNA binding POT1/CDC13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.3      0.12   2.1e+03      97     132 ..     601     632 ..     567     647 .. 0.61
   2 ?   -3.9   0.0      0.64   1.2e+04      62      75 ..     805     818 ..     804     825 .. 0.83
   3 !    3.1   0.0    0.0043        76      61      89 ..     951     979 ..     950     983 .. 0.92
   4 !   27.6   0.0   1.2e-10   2.2e-06       1     141 [.    1354    1487 ..    1354    1489 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.12
                 EEEEECCCTTSCEEEEECCCCCSTSTTCCCCSHCCH CS
        POT1  97 gfssswalFngnlnailletppilsskffelskeek 132
                   ++s++ ++g++n++l+e ++ + s  f  + +e+
  KHJ33747.1 601 ENNLSSPFYQGSENEVLEEQSYMYQS--F--TGNEY 632
                 445669999*****999666665554..2..33332 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 0.64
                 CCCCCCCGGCCCCE CS
        POT1  62 nfedLpivkkvgdi 75 
                 ++ed+ +v++vgd+
  KHJ33747.1 805 ELEDMEDVEEVGDM 818
                 689**********7 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.0043
                 CCCCCCCCGGCCCCEEECCCCEEEESTTS CS
        POT1  61 knfedLpivkkvgdiirlhraklqsynge 89 
                 +++ed+ +v++vgd+  ++ +++q++++e
  KHJ33747.1 951 EELEDMEDVEEVGDMEGVEGVEAQKIKDE 979
                 5789**********************997 PP

  == domain 4  score: 27.6 bits;  conditional E-value: 1.2e-10
                  CCCHHHHT.CTTEEEEEEEEEEEE.EECCC..SCCEEEEECCCCCTTTSCCHCTTTEEEEEEEECCCCCCCCGGCCCCEEECCCCEEEESTTSCECC CS
        POT1    1 fvdldkae.aekkvvnviGvVida.sfpkk..tggsdyvctfkivDpsknkgdendglrvvlFsknfedLpivkkvgdiirlhraklqsyngepqgl 93  
                  +++l+ ++ +++k  +v G+V +  + pk+   g +dyv tf i+Dps   ++  +  ++++F+++   Lp+v ++gd i l+++++   + ++  l
  KHJ33747.1 1354 YTPLKILSqHLNKKLDVLGIVASSpTIPKRvkGGPRDYVVTFDITDPS---IEPVSFTQIQIFRPYQDALPVV-EIGDGIILRNFQVLMNK-KNCRL 1445
                  677888888999999999999875355666768889************...99999*****************.***********996555.44444 PP

                  SEEEEEEE.CCCTTSCEEEEECCCCCSTSTTCCCCSHCCHHHHHHHHHH CS
        POT1   94 anigfsss.walFngnlnailletppilsskffelskeekkylkdlrkw 141 
                   +++   s w +   n +       +  ++ ++e sk e +y+++l  w
  KHJ33747.1 1446 KSMKQEGSgWIVVKRNGE------VQVKGP-PVEYSKAEIEYISELQTW 1487
                  444444444777777644......333333.677777777777777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2155  (0.120196); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                       202  (0.0112667); expected 17.9 (0.001)
Passed Fwd filter:                        56  (0.00312343); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 2.10u 0.40s 00:00:02.50 Elapsed: 00:00:00.62
# Mc/sec: 7218.99
//
Query:       KHJ33748.1  [L=1371]
Description: putative non-repetitive nucleoporin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   5.5e-100  335.1   2.6   7.1e-100  334.8   2.6    1.1  1  Nucleoporin_N  Nup133 N terminal like
    3.7e-50  171.3   6.6    6.8e-50  170.4   6.6    1.3  1  Nucleoporin_C  Non-repetitive/WGA-negative nucleoporin C-term
  ------ inclusion threshold ------
        4.4    7.2   5.5        1.3    8.8   0.1    2.9  4  HTH_38         Helix-turn-helix domain


Domain annotation for each model (and alignments):
>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  334.8   2.6  1.2e-103  7.1e-100       2     433 ..     115     572 ..     114     573 .. 0.92

  Alignments for each domain:
  == domain 1  score: 334.8 bits;  conditional E-value: 1.2e-103
                    E-SCEEEEEEE--HCHHHTTS--SS-EEEEEECTTTEEEEEETTEEEEEETTSSSS...EEEEEE----S---EEEEEE---SSSS-SSSCEEEEE CS
  Nucleoporin_N   2 etdfykvsklalPdelleelnhtesstkgglfpeigrawitvdnklflWnYnstasspstdtipydgeehtilavglLvkpkpgtfveevgllLvv 97 
                    +++f + + + +Pd+++e++nh+e st++glf+ei+ aw+t+dn ++lW+Y+++a    ++ i y++++++i+av+ Lvkp+ g+f ++v++lLvv
     KHJ33748.1 115 WSPFQRSKLYDIPDKIFEQYNHAEVSTMMGLFAEINHAWVTIDNCIYLWDYTDPA----PEIIGYEDQPNSITAVK-LVKPRGGVFISDVTHLLVV 205
                    6777777766*********************************************....9****************.******************* PP

                    CTTSEEEEECECCS----........----EEEEEEEE--EETT.TTEEEEEEETTTC-EEEEETTS.SEEEEEEC-SSS-CEEEEEEEEE-SSSS CS
  Nucleoporin_N  98 attgeivyweviysaasl........lstnelslfntdlsvssdgeivtqvinseptgriflagstg.rlyeltyrdssgwpslkckkicltkggl 184
                    att e+++++v++s +s+         + +++sl+ t +s+s  g +v  + +s +tgrif++ + +  +yelty++++ w++++c k+++++ g 
     KHJ33748.1 206 ATTAELILLGVSSSLGSTselsaqdsQKFKNVSLYATRMSLSIRGANVHVIEGSSDTGRIFFSAKADsSIYELTYQQEEKWFANRCGKVNHSSPGY 301
                    ***************9999988888778999**********************************999**************************** PP

                    -...--SSS--G----GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCEE-EEEEEEEHHHHHHHH.HHSCHTTTCGCTTT-EEEEEEES-TTT CS
  Nucleoporin_N 185 ssllsilpgvlsgasereeivqlridssrrilytlsskgvirvydlsasngesslksdidirqilleaitesliasaplaskslkildispvsaee 280
                    s    ++p ++s  ++ ++ivq+++d+sr++lytlss+++ir+y++ ++++  +++ d+  ++ l++    + i+++pl +++ +i +isp+s++e
     KHJ33748.1 302 S---TLVPALWS-TKPVDAIVQMVVDDSRGLLYTLSSESTIRTYHMDSPST-LKQVIDKKRQEFLRDI--SHMISHSPLLTNTMNICSISPISSKE 390
                    *...********.**********************************8876.4444444433333333..4459999******************* PP

                    SSCEEEEEEECSSSEEEEEEEEE.....EEECTTT-EEEEEEEEE.........EEEECCCCCSSSSSSSBECC-CC...SSETTCEEEEEEES-. CS
  Nucleoporin_N 281 ssllhlvaitsngvrlylllsss.....ssdspsalslvsvrfpp.........krlntysskllenkkksklllps...kiispgiflfvvfdk. 358
                     s+lhl+a t +g+rl+l+++++       ++p++++++++rfpp          ++++yss+  +++ +s  l+ +    +++pg  +f+v++k 
     KHJ33748.1 391 GSKLHLMATTTTGCRLFLSATRGygylsGQGAPQSMQVQHIRFPPrieprtssnFQQHSYSSEPATET-SSTALKLTrmgIRYPPGLHFFLVTKKd 485
                    **************************99999*****************96655544455555444444.666666668999*************** PP

                    ..-SEEEEEEEEE-TTTTSSS.........ESEEEECCS--SE-EEEEE--T--T--CCCCCCSSTTCTTTTS---.EEEETTTEEE CS
  Nucleoporin_N 359 ..ssavvlvslpdtgilkksq.........lvedasflpldgkwediislrksfdatilpsgyenesatqykePar.valltntGvv 433
                       ++++++s pdtg++  +          + e++ +++l++  edi   +ksf a+++p g++ne+a q+ +P + va+ltntG++
     KHJ33748.1 486 snGRDSLFLSGPDTGRIAAQArgitaqatrYFEQSCWIDLKSHAEDIGLVTKSFAASSQPLGFGNELAVQFDSPYQeVAILTNTGIH 572
                    999***************9999****************************************************************9 PP

>> Nucleoporin_C  Non-repetitive/WGA-negative nucleoporin C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.4   6.6   1.1e-53   6.8e-50     177     571 ..     805    1208 ..     702    1241 .. 0.83

  Alignments for each domain:
  == domain 1  score: 170.4 bits;  conditional E-value: 1.1e-53
                     XXXXXXXXXXXXXXXX.........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHHHHHHHHHHHHHH......HHHHHHHHHHXXXX CS
  Nucleoporin_C  177 lldLtklllkdlfapn.........lssiinrnisrgesieleatllqeicgslcsltdvllfraiErlrwake......qkdkklqnaiklle 255 
                     + ++ +l+++ lf+           + +i+nrni++g++i+++a +l+++cgs+cs++dv++f+a E+l++a+e        +k l+++ kl+ 
     KHJ33748.1  805 QKQFQDLTFETLFSSDqgrdlakvlVKAIVNRNIAKGSNIDTIADALRRRCGSFCSADDVVIFKAQEQLKKASEvgantdMGRKLLNESLKLFM 898 
                     444556666666666688899**9999***************************************************9999999********* PP

                     XXXXX.........XXXHHHHHHHHHHHHTSXHHHHHHHHHHHHH..HHHXSSSSXHHHH......HHHHHHH..................... CS
  Nucleoporin_C  256 kaydearkeqilkLlsigkleeaielaekledfralvellleianklasdkgederkelyekaeelekriely..................... 328 
                     +   +         l++g+l+ a +   +l+++ ++++l l  a+  +sd+g+ +    +e++   + r++ly                     
     KHJ33748.1  899 QVAGS---------LTFGNLQAATRQFSELQFYAGAINLALLVAQ--ESDRGNRALAWVNEDRPIGDTRMSLYefrkqcydlvhqilenidktc 981 
                     *****.........******************************9..999999999999999999999999999999999************** PP

                     .........................SSSXXHHHHHHHHHHHHHTTXGGGGGGX..XXTTHHHHHHHTX....XHHHHHHTHHHHXXSHHHHHHH CS
  Nucleoporin_C  329 .........................fekfgkaFayalYdwlisqgqqekLLdlkedtsfilpFLrekp....elakllWiydvkekdfeeAAei 393 
                                               ++ +++F y lY+w++ qg +++LL++  d++f+  FL + +    + a+llW ++  +++f+eAA++
     KHJ33748.1  982 gsepemldgrptlssikrnearqvvSDSDDELFQYDLYEWYLAQGWEKTLLSV--DSEFVVLFLVKSAsinvGRADLLWKFYQCRDNFFEAASV 1073
                     ************************999**************************..**********9999************************* PP

                     HHHHHSSSSXXXHHHHHH.HHHH..X---HHH................HGGGHHHHHHHHHHHHHHHH.......................H-T CS
  Nucleoporin_C  394 LysLalskeqlvlskrie.LSla..kLaqLaeleesekekkglekklekieellevaaiQddllalilpsiegaidekaeveLamekfgkklde 484 
                      + La s++ + ls+rie L++a  +   L++ ++++  +++ +     + ell+va+iQd++l++ +                       +d 
     KHJ33748.1 1074 QLGLAKSDFPIPLSRRIEyLCRAkaNASALSSHQTHNVGRQARQVLQYEVSELLDVANIQDEILQKLQ-----------------------CDP 1144
                     ***********************3334455554444444446666667899*****************.......................*** PP

                     T..S-HHHHHHHHHHHHHS---HHHHHHHTT.........TTTT-HHHHHHHHHHTT---HHH............HHHHHHHHHHHH CS
  Nucleoporin_C  485 rpalrqllkdelkklLkhkildasdLidlltLidtkeeeedplgefelALkvlkvsdlrneeeealekliWRRcvIrddWeelnetk 571 
                     r   +++ k +++  L+++i d++ L++ ++         dp  +f ++L++ +++++rne +            I   W++l++  
     KHJ33748.1 1145 R--CDNESKASITARLDGQIRDLTVLYNEFA---------DPASYFDICLTIYDAASHRNEAD------------ISATWQQLLDFT 1208
                     *..****************************.........***********************............*****9998855 PP

>> HTH_38  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.69   4.1e+03      18      32 ..     839     853 ..     836     856 .. 0.85
   2 ?    8.8   0.1   0.00022       1.3      23      36 ..    1230    1243 ..    1229    1245 .. 0.93
   3 ?   -1.5   0.0      0.38   2.3e+03      12      22 ..    1314    1324 ..    1313    1337 .. 0.84
   4 ?   -3.9   0.1         2   1.2e+04       5      17 ..    1351    1363 ..    1349    1365 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.69
      HTH_38  18 aeGlslreIArrLgr 32 
                 a+G ++ +IA  L r
  KHJ33748.1 839 AKGSNIDTIADALRR 853
                 7899999****9998 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00022
      HTH_38   23 lreIArrLgrspsT 36  
                  +r++Arr+grs sT
  KHJ33748.1 1230 IRDMARRIGRSEST 1243
                  79***********9 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.38
      HTH_38   12 eIerllaeGls 22  
                  +Ie++++e++ 
  KHJ33748.1 1314 VIEQWYEECMR 1324
                  7*******985 PP

  == domain 4  score: -3.9 bits;  conditional E-value: 2
      HTH_38    5 LsleeReeIerll 17  
                  Ls ++R  +e l 
  KHJ33748.1 1351 LSAQDRDLCEELK 1363
                  9999999999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.80u 0.28s 00:00:01.08 Elapsed: 00:00:00.42
# Mc/sec: 9786.64
//
Query:       KHJ33749.1  [L=176]
Description: putative histone lysine methyltransferase set7 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.2e-12   46.0   0.0    8.6e-11   42.5   0.0    2.0  1  SET       SET domain


Domain annotation for each model (and alignments):
>> SET  SET domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   4.8e-15   8.6e-11       1     169 []      31     144 ..      31     144 .. 0.77

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 4.8e-15
                 SCEEEESSXBXTTXEEEEEEECCEECHHHHHHHHHH....HTEEEEEXGGXXGGSXHHHHHHHTTSSHHHHHHHHHHHHHHHHHHTHHHHHHHXTTTSX CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET   1 GrGvfAtedIpkgeficeypeeiiltkdeadksele....aylfslpeapknlaftkelakasastllqklakdqkqaekedtdaalkasskaesdlna 95 
                 GrGvfA+edIp+ +++ e+ + ++l++ e++++  +    +y   +p                                                 +  
  KHJ33749.1  31 GRGVFASEDIPARSIL-EVSPVLVLNPKENEEHIRKtnlyNYTYNWP-------------------------------------------------Y-- 77 
                 9***************.9*************99999*9876666688.................................................1.. PP

                 XXHCCCCC.HCCCHEEEETEEEEEECCCGTTGGGCEEXS.SSSEEEEEEEETTSSEEEEEESSXBXTTEEEEEXTT CS
                 xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         SET  96 skpeagaf.saiagysidaralksgngagplarflNHsC.dpNcnltvqnvlrgprvavfAtrdIkkGeEltidYg 169
                   p+ +a  ++  ++s+++ a   g      ++++NHs  + N+ +  ++  +++ +++ ++rd+k+GeEl+i Yg
  KHJ33749.1  78 --PTLSALvENGKNSSMQTQAIILGL-----GSMFNHSAqEHNVGWKRDV--QNMIITYWTLRDVKAGEELCIHYG 144
                 ..222222344444556644444444.....57*****956688555555..99*********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       338  (0.0188521); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 1472.04
//
Query:       KHJ33750.1  [L=336]
Description: putative translation initiation factor eif4e3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.5e-54  181.7   0.0    1.3e-53  181.0   0.0    1.3  1  IF4E      Eukaryotic initiation factor 4E


Domain annotation for each model (and alignments):
>> IF4E  Eukaryotic initiation factor 4E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.0   0.0   7.4e-58   1.3e-53       1     159 []     141     298 ..     141     298 .. 0.93

  Alignments for each domain:
  == domain 1  score: 181.0 bits;  conditional E-value: 7.4e-58
                 EEEEEEEEEEE-TTT--SS-....SGGG-EEEEEEEEHHHHHHHHHHS--GGGB-SSEEEEEEETT--SSTTSHHHHS-EEEEEEE-----HHHHHHHH CS
        IF4E   1 pLkskWtlwfdsksksksen....yeeslkkvatfstveeFwslynnlkkpsklkvksdyhlFkkgikPmWEdpankkGGkwvirlkkkekldrlWeel 95 
                 pL+ +W++wf  +++  ++n    ye++l+++a fs+ e+F+++y++lk+ps+l++ sdyhlFkkg++P+WEd++n+kGGkw++rlkk +  dr+We+l
  KHJ33750.1 141 PLRYNWVVWF--RPPIAKSNgyiqYEKTLHPIAGFSNAEDFFTVYRHLKRPSALPPVSDYHLFKKGVRPVWEDNENRKGGKWIVRLKK-GLSDRYWEDL 236
                 799*******..444223333555***************************************************************9.99******** PP

                 HHHHHTT-SS--.-SEEEEEEEE-SSEEEEEEEES-TT-HHHHHHHHHHHHHT--------EEE CS
        IF4E  96 llaligeqleeeedeicGvvvsvRkkedrisiWtrdasdeekvekigeklkevlelpeekkley 159
                 ++a++g+q++e+++e+cG+v+svR+ ed++siW r++    +v ki+e++k++l++p+++k+e+
  KHJ33750.1 237 IFAIVGDQFAEASEEVCGAVLSVRNGEDILSIWARND--GGRVLKIRETMKRILGFPPDTKVEW 298
                 ************************************9..579******************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       685  (0.0382063); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.35
# Mc/sec: 2841.90
//
Query:       KHJ33751.1  [L=321]
Description: putative duf974 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-73  247.6   0.0    1.8e-73  247.4   0.0    1.1  1  DUF974    Protein of unknown function (DUF974)
  ------ inclusion threshold ------
       0.11   12.2   0.0       0.24   11.1   0.0    1.6  1  LRR_12    Leucine-rich repeat


Domain annotation for each model (and alignments):
>> DUF974  Protein of unknown function (DUF974)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.4   0.0     2e-77   1.8e-73       1     245 [.      68     317 ..      68     318 .. 0.92

  Alignments for each domain:
  == domain 1  score: 247.4 bits;  conditional E-value: 2e-77
      DUF974   1 LtLPqsFGsiylGetFscylcvnnesae.....kevrdvrikaelqtpsqr..leL.............eeseeeekekelepgeslqkvvshelkelG 79 
                 LtLP++FG +y+Ge Fsc+lc+nne+ +     k+++ v+i+ae++tp++   ++L             e+++ ++ + +l+pg+slqk+v+ elke+G
  KHJ33751.1  68 LTLPPAFGYAYVGEVFSCTLCANNEILPgniseKSINAVHIEAEIKTPNSGapIKLslspsssksektlEDKDVQTDGINLAPGQSLQKIVQVELKEEG 166
                 89************************9999**9*****************988455669999998888889999999********************** PP

      DUF974  80 nhvLavtVsYteatkeasgrtrtfrKlYkFqvkkpLsVrtkvteleskeaalreevvLeaqleNvtedaivlekvklepeeglkaeslneeekeeeeee 178
                 nhvL v+V+Y+e+  ++sgr+r+frKlY+F++k++LsVr+k+t+++sk+    ++++LeaqleN++e++i+l++v ++ ++g++++sln +  ++ + +
  KHJ33751.1 167 NHVLTVSVTYSENF-ATSGRVRNFRKLYQFVCKNCLSVRSKITAIPSKS---YKTWALEAQLENCGEENIILQNVIFNDQKGFRSKSLNLNFIKQADVH 261
                 **********9888.******************************9655...89***********************************6665555443 PP

      DUF974 179 eekeeekpvlqpgdvrqvlFlleeepkeeeaekeeeeakgrlilGkLdisWrsamGerGrLqTsqLs 245
                      e+p l pgdv+qv+Fl+ee ++      + e ++g+li+G +++ Wr++mG++G+L+T+ L+
  KHJ33751.1 262 -----ENPKLMPGDVQQVCFLIEEVDE------KPEIISGKLIFGTMSVYWRGTMGSKGHLTTDPLG 317
                 .....4599*************55444......6789**************************9985 PP

>> LRR_12  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   2.7e-05      0.24       5      15 ..     249     259 ..     246     261 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.7e-05
      LRR_12   5 hLqmNFInqAq 15 
                 +L +NFI+qA+
  KHJ33751.1 249 SLNLNFIKQAD 259
                 799*******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 2691.53
//
Query:       KHJ33752.1  [L=290]
Description: hypothetical protein EV44_g3523 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-14   53.4   0.0    4.6e-14   52.8   0.0    1.3  1  RNase_H   RNase H
    0.00025   20.9   0.2    0.00088   19.1   0.0    2.0  3  RVT_3     Reverse transcriptase-like


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   0.0   5.1e-18   4.6e-14       2     142 ..       3     146 ..       2     147 .. 0.70

  Alignments for each domain:
  == domain 1  score: 52.8 bits;  conditional E-value: 5.1e-18
                 .SEEEEEEEEEECTTTCEEEEEEECTT..E..EEEEEECCCCHHHHHHHHHHHHHHH.TT.SC.....SEEEEEES-HHHHHHHHCCCHHHHHTTSSSE CS
     RNase_H   2 kavvvYtDGsclgnpgeggagavlykegar..nisapleeaqtnnraELsAvieaLk.alksd.....ekvniytDSkYvvkgitqwvhrwkknawktt 92 
                 +++ vY+DG+   n+ ++g ++vly+ g +    s+ ++       aE++A+ + +k a+++      +++ ++tD + + + ++     +++++    
  KHJ33752.1   3 HDMHVYSDGAVT-NEDKAGGAFVLYQAGRKvlAESFGINYGVEPIDAEIIAISHGIKtAVQKApirfaTNIAVFTDNQTAANIVNGKNSLTSRKE---I 97 
                 5799******77.555555667777776444555566666677888***********655444788889999*****988884444333333322...2 PP

                 TTSSBHTTHHHHHHHHH..CHCSSEEEEEE-SCCSSSTHHHHHHHHHHHHHH CS
     RNase_H  93 seqkpvknkdlaellke..lakkkkvqlkwvkgHaGvpkgNemaDrlAkeaa 142
                  e +  k+++ ++  ++  ++++ ++   w++gHa+ p gNe+aDrlAk++a
  KHJ33752.1  98 LEIR--KSQEEWKSRSRfpHIQPGNIFACWIPGHANTP-GNEEADRLAKQGA 146
                 3332..334445444441146799*************8.***********98 PP

>> RVT_3  Reverse transcriptase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   9.9e-08   0.00088       3      94 ..      10     103 ..       8     120 .. 0.69
   2 ?   -2.6   0.0      0.52   4.7e+03     109     123 ..     130     144 ..     128     145 .. 0.78
   3 ?   -2.3   0.1      0.41   3.6e+03      79      98 ..     155     174 ..     149     182 .. 0.64

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 9.9e-08
       RVT_3   3 dgafkkksgaggagvvirdsnGevllagaeklqgkasveeAElqALlrGLqlalk....lgirrlvvegDsktvvqllngrekvksselanlldei 94 
                 dga++++  ++g + v+ ++ G+ +la +  ++ + ++  AE  A+ +G+++a++    +  +++ v +D++t ++ +ng+++++s++    +++ 
  KHJ33752.1  10 DGAVTNE-DKAGGAFVLYQA-GRKVLAESFGINYGVEPIDAEIIAISHGIKTAVQkapiRFATNIAVFTDNQTAANIVNGKNSLTSRKEILEIRKS 103
                 7766444.444444444443.43344333348****************9988876333257899******************98877765555544 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.52
       RVT_3 109 ipReqNrvAdalAkr 123
                  +  +N  Ad lAk+
  KHJ33752.1 130 ANTPGNEEADRLAKQ 144
                 55568999*****97 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.41
       RVT_3  79 rekvksselanlldeirkll 98 
                 ++k+ +  +++l+++ir+ +
  KHJ33752.1 155 DNKMSHAVVKKLINSIRSTM 174
                 34446666777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2097.64
//
Query:       KHJ33753.1  [L=89]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       291  (0.0162307); expected 358.6 (0.02)
Passed bias filter:                      225  (0.0125495); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.24s 00:00:00.58 Elapsed: 00:00:00.39
# Mc/sec: 688.23
//
Query:       KHJ33754.1  [L=236]
Description: putative u3 small nucleolar rna-associated protein utp11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-57  193.6  12.0      6e-57  193.4  12.0    1.0  1  Utp11     Utp11 protein
  ------ inclusion threshold ------
       0.06   13.6   0.1        0.2   11.9   0.1    2.0  1  DUF3247   Protein of unknown function (DUF3247)
      0.078   12.3   0.2       0.14   11.5   0.2    1.3  1  SLATT_5   SMODS and SLOG-associating 2TM effector domain fami


Domain annotation for each model (and alignments):
>> Utp11  Utp11 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.4  12.0     1e-60     6e-57       1     245 []      10     236 .]      10     236 .] 0.87

  Alignments for each domain:
  == domain 1  score: 193.4 bits;  conditional E-value: 1e-60
       Utp11   1 rrnHkERsQpaeRaklGlLEKkKDYklRAkdyhkKqaklkaLreKAaerNpDEFyfgMikskt.kkgvhv..ekekdrgnealsedqvkllktqDlnYv 96 
                 rr+ +ER Qp+eR+k+GlLEK+KDY+ RA+dy++K+aklkaLr+K+ e+NpDEFyfgM+++   k+g+    + + drgn+ ls+++v+llktqDl Y+
  KHJ33754.1  10 RRSYRERDQPKERKKWGLLEKHKDYSARARDYNEKKAKLKALRQKVLEKNPDEFYFGMMSRIGpKTGKDSsgTIAGDRGNQILSQEAVRLLKTQDLAYI 108
                 8***********************************************************9887777777778899*********************** PP

       Utp11  97 rtkraierkkiekleeelhlleaeakseakeskkkkknkhivFvdseee..akefdaaekfetepelleeeeeeekeerkenrkkvkqkekkkeklyke 193
                 r  r+i  k++ +le+ ++ +e             +++++++++++ ++   + f++ +  +t++++ e    + +  +++nr++++  + ++ekl  +
  KHJ33754.1 109 RNARNIVIKEVANLETAVKGIE-------------GQGRKVIYLEDGSDqlTEIFNNGQIHQTNEDNNE----SLELLDTKNRRRLQ--QCQAEKLRAK 188
                 *******************988.............3467899998655522445555554444444444....44555555555533..678999**** PP

       Utp11 194 LkarlerekqLkkaeqelelqralmkkgakkkvkkgkkkkaavykwkkeRkr 245
                 L  ++er+k+L++aeq l+lqra+m   ak+ +++g +k++ ++k++ eRkr
  KHJ33754.1 189 LVVARERLKALADAEQALDLQRAKM---AKSPTVGGINKHGIKFKVR-ERKR 236
                 *************************...9999***************.***9 PP

>> DUF3247  Protein of unknown function (DUF3247)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   3.4e-05       0.2      14      41 ..     118     145 ..     109     193 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.4e-05
                 HHHHHHHHHHCTTTT-EEEEEETTS-EE CS
     DUF3247  14 kiaelealvklldseervaleledGrql 41 
                 ++a+le+ vk ++++ r  + ledG+  
  KHJ33754.1 118 EVANLETAVKGIEGQGRKVIYLEDGSDQ 145
                 69***********************853 PP

>> SLATT_5  SMODS and SLOG-associating 2TM effector domain family 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   2.3e-05      0.14      79     110 ..      26      57 ..      25      65 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2.3e-05
     SLATT_5  79 sllessknykerAekfhkcaleLselynelrl 110
                 +lle+ k+y++rA+ +++   +L+ l ++  +
  KHJ33754.1  26 GLLEKHKDYSARARDYNEKKAKLKALRQKVLE 57 
                 5899***********************98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1164  (0.0649228); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 1829.20
//
Query:       KHJ33755.1  [L=658]
Description: putative peroxisomal abc transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-89  299.7   0.3    3.6e-89  298.7   0.3    1.5  1  ABC_membrane_2   ABC transporter transmembrane region 2
    1.2e-13   51.7   0.0    2.2e-13   50.9   0.0    1.4  1  ABC_tran         ABC transporter
  ------ inclusion threshold ------
       0.02   14.7   0.0      0.055   13.2   0.0    1.7  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
       0.05   14.0   0.0       0.11   12.9   0.0    1.5  1  AAA_16           AAA ATPase domain
      0.067   13.7   0.5        3.3    8.2   0.0    2.4  2  AAA_23           AAA domain
      0.072   12.8   0.0       0.13   12.0   0.0    1.3  1  Sigma54_activat  Sigma-54 interaction domain
      0.085   12.2   0.1       0.15   11.5   0.1    1.3  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.089   13.2   0.0       0.19   12.1   0.0    1.5  1  AAA              ATPase family associated with various cellul
       0.14   11.9   0.0       0.33   10.7   0.0    1.7  1  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
       0.14   11.9   0.1       0.33   10.7   0.1    1.5  1  AAA_29           P-loop containing region of AAA domain


Domain annotation for each model (and alignments):
>> ABC_membrane_2  ABC transporter transmembrane region 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  298.7   0.3     2e-92   3.6e-89       5     269 .]       1     267 [.       1     267 [. 0.99

  Alignments for each domain:
  == domain 1  score: 298.7 bits;  conditional E-value: 2e-92
  ABC_membrane_2   5 lipklkskeallllvlllllvlrtllsvlvaqldgklvkalvaknvraFvlsllkfallavpasfvnsalkYltqkLalafRkrLtkhllseYlk 99 
                     +ip++ ske++lll + ++l+lrt+ls++va+ldg++v+ lva+n r+F++ ++k++ + ++as++n+++k+l++k++++fR+rLt+++++ Yl+
      KHJ33755.1   1 MIPRWTSKETGLLLSHGVFLMLRTYLSLVVARLDGEIVRDLVAGNGRSFIWGIFKWCGIGSFASYTNAMIKFLQSKVSISFRTRLTRYIHDLYLN 95 
                     79********************************************************************************************* PP

  ABC_membrane_2 100 nr.tyYkvsnlde.ridnpDqritqDvekFtsslssLlsglvkpildvilftfiLwslsgtlgllllllyvllatvilriigpplgklvaeeekl 192
                     ++ +yY++ n+d+   + +Dq itqD++ F++s+++L+s++ kp++d+i+f+++L+ ++g+lgl+ l+++++l++++lr+++pp+gkl+a e ++
      KHJ33755.1  96 DNlNYYRLVNIDGgVGQGVDQFITQDLTHFCASAANLYSSIGKPFVDLIVFNYQLYCSLGPLGLTGLMSNYILTAILLRKMSPPFGKLKAVEVRK 190
                     999*********97789****************************************************************************** PP

  ABC_membrane_2 193 egefRylhsrlitnaEeIAFyrGeevEkkqlqrrfkslidnlrrilsrrlrlgiieafvlkYlasilgyvlvalpif 269
                     eg+fR+lh rli+naEe+AFy+G+ +E+  lqr+fksl ++++ i+  ++ ++i+e+f+lkY +s++gy+l +lpif
      KHJ33755.1 191 EGDFRFLHARLIANAEEVAFYGGASMENYFLQREFKSLKNWMEGIYALKIQYNILEDFILKYSWSAYGYLLSSLPIF 267
                     ***************************************************************************98 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.9   0.0   1.2e-16   2.2e-13       3     136 ..     396     539 ..     394     540 .. 0.90

  Alignments for each domain:
  == domain 1  score: 50.9 bits;  conditional E-value: 1.2e-16
                 EEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH..............HHHTCHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxx RF
    ABC_tran   3 nvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren..............esdeeiek 87 
                  +sl ++ g  + i G+nG GKS +++++agl     G +        ++++++    i +lpq p l  ++ +r++              ++d+e+++
  KHJ33755.1 396 SLSLVIHSGDHLLISGPNGVGKSAVARIVAGLWPVYRGLV--------SRSRNIGTDGIFFLPQRPYLSAGT-LRDQviyphgavdmnergWRDAELQR 485
                 68999***********************************........345788899********9999999.99999*******99999999999*** PP

                 HHHHSTTGGTTCBGESTTS.....GGS-HHHHHHHHHHHHHHHTSSEEEEESTT CS
                 xxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  88 alsklglkelkdtvvkssp.....ssLSgGqkqrvalarallkkpkllllDEpt 136
                 +l++  l +l+++  + +        LSgG+kqr+++ar++  +p+  ++DE t
  KHJ33755.1 486 VLDEAYLGYLPEREGGWDIrkewkDVLSGGEKQRMSIARLFYHEPRYAFIDEGT 539
                 *******9977776544445556799**************************88 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   3.1e-05     0.055      32      54 ..     403     425 ..     389     430 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.1e-05
      RuvB_N  32 aldhvllyGpPGlGkttlakiia 54 
                 + dh+l++Gp G+Gk+++a+i+a
  KHJ33755.1 403 SGDHLLISGPNGVGKSAVARIVA 425
                 67*******************98 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   5.9e-05      0.11      22      44 ..     402     424 ..     389     467 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 5.9e-05
      AAA_16  22 grpelvllsGesGvGKsslvrel 44 
                 +++  +l+sG+ GvGKs+++r +
  KHJ33755.1 402 HSGDHLLISGPNGVGKSAVARIV 424
                 344789*************9866 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0    0.0019       3.3      23      36 ..     408     421 ..     392     446 .. 0.87
   2 ?    3.2   0.2      0.06   1.1e+02     140     186 ..     585     632 ..     500     645 .. 0.65

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0019
      AAA_23  23 lItGpNGaGKTTil 36 
                 lI+GpNG GK+++ 
  KHJ33755.1 408 LISGPNGVGKSAVA 421
                 9**********875 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.06
      AAA_23 140 qerfeefelkdkkerleelekeleeledekkllekl.eqekekekele 186
                 +++++efe+  ++++  e+e+el+el++  +++ ++ +++ e ekel+
  KHJ33755.1 585 DGNEWEFEKIGTEKEKLEVERELKELTECLDKVPDWlNRKIEIEKELS 632
                 234888888555555555666666666644444444234444555554 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   7.2e-05      0.13      10      42 ..     392     424 ..     389     433 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 7.2e-05
                      HHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHH CS
  Sigma54_activat  10 elleqikkvaktdlsvlitGesGtGKellarai 42 
                      +l+e+++ v+++  ++li G +G+GK+ +ar +
       KHJ33755.1 392 QLIESLSLVIHSGDHLLISGPNGVGKSAVARIV 424
                      788999999*********************976 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   8.2e-05      0.15       9      47 ..     391     429 ..     388     434 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 8.2e-05
  Mg_chelatase   9 eeakraleiaaaGgHnlllvGppGsGKtmlakrlpsllp 47 
                   e+  + l + +  g +ll+ Gp G GK+ +a+ +++l p
    KHJ33755.1 391 EQLIESLSLVIHSGDHLLISGPNGVGKSAVARIVAGLWP 429
                   5556677777777888****************9999987 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00011      0.19       1      21 [.     407     427 ..     407     445 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00011
                 EEEESSTTSSHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavake 21 
                 +l++Gp G+GK+++a+ va  
  KHJ33755.1 407 LLISGPNGVGKSAVARIVAGL 427
                 689***************975 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00019      0.33       4      44 ..     409     446 ..     407     512 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00019
      AAA_21   4 liGpNgsGKSnLLdaldllarl.drdvegltdelsggggirk 44 
                 + GpNg+GKS + ++  +l+ + +    gl + ++++g+ ++
  KHJ33755.1 409 ISGPNGVGKSAVARIVAGLWPVyR----GLVSRSRNIGTDGI 446
                 56*****************66442....33333333333332 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00018      0.33      19      37 ..     401     419 ..     393     421 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00018
      AAA_29  19 idlkgatlltGpsGsGKST 37 
                 i+  +  l++Gp+G+GKS+
  KHJ33755.1 401 IHSGDHLLISGPNGVGKSA 419
                 5544589***********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (658 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       577  (0.0321825); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 4614.28
//
Query:       KHJ33756.1  [L=794]
Description: putative bgh specific protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (794 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       968  (0.0539907); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.26s 00:00:00.91 Elapsed: 00:00:00.43
# Mc/sec: 5483.19
//
Query:       KHJ33757.1  [L=482]
Description: putative extracellular chitinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-75  254.9   0.0    1.8e-75  254.5   0.0    1.1  1  Glyco_hydro_18  Glycosyl hydrolases family 18
    1.5e-06   28.6  20.0    2.4e-06   27.9  18.2    2.2  2  Chitin_bind_1   Chitin recognition protein


Domain annotation for each model (and alignments):
>> Glyco_hydro_18  Glycosyl hydrolases family 18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  254.5   0.0   2.1e-79   1.8e-75       1     312 []      21     414 ..      21     414 .. 0.89

  Alignments for each domain:
  == domain 1  score: 254.5 bits;  conditional E-value: 2.1e-79
                     EEEEEEEGGGGGSS.GCSHTTTESEEEEEEEEEEETTTEEEESS.TTHHHHHHHHHHHHHHTSTT-EEEEEEEETTTTTHHHHHHTSHHHHHHHH CS
                     xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18   1 rvvgYysswesygn.nylpsaklthiiyaFakidgengkvvvsd.wedlgnfeqlkklkkkknpgvkvllsiGGwtdssgfslaastdasrkkfa 93 
                     r+v Yy+++++ +  +++ +a+++h+++aFa     n++++++   +++++fe++ ++++ ++pg+kvl++iGGw+d++gf + a+td+srk fa
      KHJ33757.1  21 RYVFYYDQYHVGAPnRTI-TAGIDHVVVAFA-----NSSLFTTSpPGQYQPFEDIPTIRSYFDPGTKVLIAIGGWADTQGFGQGAATDESRKLFA 109
                     5799******99653344.************.....778999999************************************************** PP

                     HHHHHHHHHCT-SEEEEEES-TTTS............TCHHHHHHHHHHHHHHHHHHHHHHTSTTCEEEEEEESSHHH.HHHH..CHHHHHHHHT CS
                     xxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxx..xxxxxxxxxx RF
  Glyco_hydro_18  94 dsvvsllrkygfDGiDidweypggn............pedkenytallkelrealdkakategkkllLsaavpasasd.lskg..ydlpkiakyl 173
                     ++++ l+++ygfDG+Didweypggn            +++ ++y+ ll e+r a+       g++ lL++a p++ +d +  +  ++ p+i+ ++
      KHJ33757.1 110 ANIALLCDQYGFDGVDIDWEYPGGNgadyrqipnsakVSEIDTYPVLLGEIRRAI-------GPNRLLTIATPGKVRDmIA-YtpEKSPAIWMLV 196
                     *************************999999999999999*************55.......5899************543.359999******* PP

                     SEEEEETTTSSSTTSSBE--SS-SSBTCSSHHHHHHHHH.HTT--GGGEEEEEESEEEEEEESSSSSS.........................TS CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx.........................xx RF
  Glyco_hydro_18 174 DyvnvmtYDfhgswdnvtghhaplydaslnvdeavkeyl.kagvpakklvlGvpfygrawalvsgadn.........................tk 242
                     D+vnvmtYD+++++dn t hh+++      + e+v++y+    +++kk++lG+++y++ ++ +  +                           t+
      KHJ33757.1 197 DWVNVMTYDLMNRRDNITAHHTDV----KASLETVDYYInTLHLDPKKINLGFAMYAKYFKVDPAQPCatglgcvtelledengndtgksgtvTF 287
                     ************************....9**********5559*****************98776433666667777777777778777775533 PP

                     TTTEEEHHHHHHHH........................................................TEEEEEEEEETTTTEEEEEETT..E CS
                     xxxxxxxxxxxxxx........................................................xxxxxxxxxxxxxxxxxxxxxx..x RF
  Glyco_hydro_18 243 eegvlsykelkell........................................................kkakakrkydskakapyvydge..e 279
                       +  +++++++++                                                        ++a a++ +d++a+++y++d     
      KHJ33757.1 288 --QAENFAQIPSNItettdgscgastltkcadgeccsafgfcgstpdycnncqgpafgsgcqtpsisslfQNAIANGITDEDAGGQYYFDRAnnL 380
                     ..344555666666888888888888888889999999999999999999999999999999999999999*******************9999* PP

                     EEEE-SHHHHHHHH.HHHHHTTESEEEEETGGGS CS
                     xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18 280 fvsyDdpksikaka.dyvkakglgGvmiWsldqD 312
                     f+++D+++ i++k+ d+v a+glgGvm+Wsl qD
      KHJ33757.1 381 FWTWDTAALIARKFnDIVAARGLGGVMAWSLAQD 414
                     ********************************99 PP

>> Chitin_bind_1  Chitin recognition protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.34     3e+03      17      25 ..     116     124 ..     114     128 .. 0.84
   2 !   27.9  18.2   2.6e-10   2.4e-06       2      35 ..     307     338 ..     306     348 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.34
                    E-TTSBEEB CS
  Chitin_bind_1  17 CSqyGyCGt 25 
                    C qyG+ G+
     KHJ33757.1 116 CDQYGFDGV 124
                    99****886 PP

  == domain 2  score: 27.9 bits;  conditional E-value: 2.6e-10
                    -SGGCTT---STT-EE-TTSBEEBSHHHHSTT-- CS
  Chitin_bind_1   2 CGkqaggatCplnvCCSqyGyCGttsdyCgagCq 35 
                    CG++   ++C+++ CCS +G+CG+t+dyC ++Cq
     KHJ33757.1 307 CGAS-TLTKCADGECCSAFGFCGSTPDYC-NNCQ 338
                    9988.689*********************.6888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       466  (0.0259914); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3515.06
//
Query:       KHJ33758.1  [L=545]
Description: putative acetylserotonin methytransferase-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.037   13.3   0.1      0.065   12.5   0.1    1.3  1  SabA_adhesion  SabA N-terminal extracellular adhesion domain


Domain annotation for each model (and alignments):
>> SabA_adhesion  SabA N-terminal extracellular adhesion domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   3.6e-06     0.065      99     151 ..     258     310 ..     247     347 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.6e-06
  SabA_adhesion  99 ndpaqngttitCnryesgkngklsieeyeklneAYqiiqkAlknqaglpaLnd 151
                     + + n t+++  ry+++kn+++si  + k ++   ++++ l+++a   +L+d
     KHJ33758.1 258 YTSTSNNTQMNVMRYDPEKNASISILGFSKFDKGIEVVSTTLEKKARQIPLED 310
                    4567899**********************************666555445555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (545 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3868.47
//
Query:       KHJ33759.1  [L=102]
Description: putative mlx-interacting protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-11   42.8   0.4    2.2e-10   40.3   0.0    2.3  3  HLH       Helix-loop-helix DNA-binding domain


Domain annotation for each model (and alignments):
>> HLH  Helix-loop-helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0     0.099   1.8e+03      22      37 ..       9      24 ..       8      26 .. 0.82
   2 !   40.3   0.0   1.2e-14   2.2e-10       1      50 [.      28      76 ..      28      79 .. 0.95
   3 ?   -0.8   0.1     0.089   1.6e+03       8      13 ..      80      85 ..      76      93 .. 0.59

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.099
                HHHHCSTCSTTSS-ST CS
         HLH 22 eLrellPslppskKls 37
                 L  ++Ps + +++ls
  KHJ33759.1  9 DLNIIVPSIEEKPRLS 24
                5777999999999998 PP

  == domain 2  score: 40.3 bits;  conditional E-value: 1.2e-14
                HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHH CS
         HLH  1 rraahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIk 50
                ++a+h + E++RR+ i++++++L el+P +  ++  s + +L+k+v+YI+
  KHJ33759.1 28 KKANHIASEQKRRQAIREGFDRLTELVP-GLEGQGRSESVVLKKTVDYIR 76
                699*************************.8999999*************8 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.089
                HHHHHH CS
         HLH  8 rErrRR 13
                +Er+R 
  KHJ33759.1 80 AERQRL 85
                666663 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       946  (0.0527637); expected 358.6 (0.02)
Passed bias filter:                      546  (0.0304535); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 770.68
//
Query:       KHJ33760.1  [L=264]
Description: putative acetylserotonin methytransferase-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-47  161.3   0.0    2.1e-47  161.1   0.0    1.0  1  Maf       Maf-like protein


Domain annotation for each model (and alignments):
>> Maf  Maf-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.1   0.0   1.2e-51   2.1e-47       1     165 [.      46     248 ..      46     249 .. 0.93

  Alignments for each domain:
  == domain 1  score: 161.1 bits;  conditional E-value: 1.2e-51
                 EEEEE---HHHHHHHHCT-...EEEE------........HHHHHHHHHHHHHHHHH..............TCEEEEEEEEEE....CE---SSHHHHH CS
         Maf   1 kliLASaSprRkelLeqlg...fevvpsdvde........aeelvlrlAeaKaeava..............alvigaDtvvvl....ilgKPkdeeeal 70 
                 ++iLAS Sp+Rk++++ lg   +e++ps+  e        + ++vl++A +K+ +v+              +lvi+aDt++v     il+KP++e++++
  KHJ33760.1  46 RVILASRSPQRKQIFSLLGfknVEIIPSTKPEnlskedlgPFDYVLQTAMQKCLDVYtivmsnssvsvadpSLVIAADTIMVTttgrILEKPRNENDHI 144
                 58*****************66659*****99999999***999*********************999999999*********866666*********** PP

                 HHHHHH.TTSEEEEEEEEEEEE........EEE..EEEEEEEEEE-.---HHHHHHHHHCTSGCCSTTS--TTCGGGGGCEEEECS-HHHHHT--HHHH CS
         Maf  71 emLkkl.sgrthevvTgvavlk........ekevksfvettevtfk.elsdeeieaYvatgepldkAGaygiqgllglalverieGsysnVvGLPlael 159
                 +mL++l ++r h+++T+v+ ++        +++++++ve+t+v+f+ e+sd+ i+aYv+t+e ++kAG+ygiqg+ g+ lve+i+Gs++nV+GLPl+++
  KHJ33760.1 145 QMLTMLrNQRIHKCFTAVVAIAprddardpGYNIETTVEETQVYFSpEVSDDLIKAYVRTREGVEKAGGYGIQGM-GSLLVEKIDGSVDNVIGLPLRTT 242
                 ******446789******99999*******888999*********759**************************8.888******************** PP

                 HHHHCC CS
         Maf 160 lelLke 165
                 l+l+++
  KHJ33760.1 243 LQLIER 248
                 ***986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.20s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2023.25
//
Query:       KHJ33761.1  [L=445]
Description: putative threonyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.3e-36  124.5   0.0      3e-34  118.6   0.0    2.3  1  tRNA-synt_2b    tRNA synthetase class II core domain (G, H, P
    0.00068   19.7   0.1     0.0013   18.8   0.1    1.5  1  HGTP_anticodon  Anticodon binding domain


Domain annotation for each model (and alignments):
>> tRNA-synt_2b  tRNA synthetase class II core domain (G, H, P, S and T)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.6   0.0   3.3e-38     3e-34       5     179 .]      37     264 ..      33     264 .. 0.86

  Alignments for each domain:
  == domain 1  score: 118.6 bits;  conditional E-value: 3.3e-38
                   ETTSEEEEE-SSSHHHHHHHHHHHEEEBGG.SSEEEEEEEEEEBTTTS.TBCTTTB-SEEEEEEEEEEESGGGHHHHHHHHHHHHHHHHHHTT.SCE CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2b   5 drndreyiLkPtneetfvelirdevlrskr.LPlklyqiqtkyRdEks.dsrGLlRvreFhqkdgyvfhaeaslddslrdlikaisriferlglefr 99 
                   +++d+ey LkP+n+++++ ++  + +rs+r LPl+++++++++R+E    ++GL+Rvr Fhq+dg++f+ ++++++++r+ ++ ++  ++ lgle +
    KHJ33761.1  37 KDQDEEYGLKPMNCPGHCLIFASK-ARSYRdLPLRYADFSPLHRNEGTgTLSGLTRVRCFHQDDGHIFCRPSQIKEEIRKSLEFVKLTYSVLGLEPY 132
                   5679*******************9.***777****************87899******************************************999 PP

                   EEEEEGTTSC..................................BTTSEEEEEEEEETTTSEEEEEEEEEEEETHHHHHTTE........EEECTTS CS
                   xxxxxxxxxx..................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxx RF
  tRNA-synt_2b 100 aiielmsaks..................................adykdkkefeavsesltkgieigtiqklgtrlserlga........tvldenn 154
                    ++++++ ++                                  a+y++k ++ + +   +k ++++tiq + ++l++r+++        +  ++n+
    KHJ33761.1 133 RLVLSTRPQEkyigsieewkyaeaalveslndcgsnwtidegggAFYGPKIDIILQDT-GGKDHQTATIQLD-FQLPKRFELqyqapapaQ--EQNG 225
                   999998776679999****************************************999.9************.********9444443220..2222 PP

                   SE............EEEEEEEEE.EE.HHHHHHHHHHHH CS
                   xx............xxxxxxxxx.xx.xxxxxxxxxxxx RF
  tRNA-synt_2b 155 re............ksvimicaa.ig.veRllsaileqn 179
                   +              ++i+i++a +g veR++++++e++
    KHJ33761.1 226 QLcndrsllnvegpVTPILIHRAvLGsVERIMALLIEKY 264
                   2122222222222368999****9999*****9999975 PP

>> HGTP_anticodon  Anticodon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.1   1.5e-07    0.0013       1      71 [.     276     365 ..     276     377 .. 0.92

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1.5e-07
                     SEEEEESSSSHHHHHHHHHHHHHHHHTTT....................SEEEEESSSSTHHHHHHHHHHTT-SEEEEE-HHHHHHTEEEE CS
  HGTP_anticodon   1 qvvviplnekaeeleeyakklaeeLraag....................irvelddsnesigkkireadllgipfavvvGekelekgtvtv 71 
                     q+++i++n+ + e++e+a++ ++ ++  g                    i++++ d++ s+  ki+ a+ + + ++v vG+k+++++t++v
      KHJ33761.1 276 QIAIITVNN-SPEVLEFARQAKNIIQGFGtsnseqeryldkriktrginINIKVFDKTTSVSHKIAVAKSQRYGIIVLVGPKDIQSQTLSV 365
                     789999998.8889999999999999999999999999999999999*****************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 3409.26
//
Query:       KHJ33762.1  [L=161]
Description: putative cmc1 domain-containig protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-15   57.4   6.9      4e-15   55.6   6.9    1.9  1  Cmc1      Cytochrome c oxidase biogenesis protein Cmc1 like
  ------ inclusion threshold ------
      0.011   15.5   0.5      0.019   14.7   0.5    1.5  1  NDUF_B7   NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)
      0.021   14.8   0.2      0.041   13.9   0.2    1.5  1  CX9C      CHCH-CHCH-like Cx9C, IMS import disulfide relay-sys
       0.22   11.7   4.8        2.3    8.5   5.0    2.3  2  CHCH      CHCH domain
       0.24   11.4   3.1        0.6   10.2   3.1    1.6  1  YqzE      YqzE-like protein


Domain annotation for each model (and alignments):
>> Cmc1  Cytochrome c oxidase biogenesis protein Cmc1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.6   6.9   1.1e-18     4e-15       2      69 .]      33      99 ..      32     120 .. 0.96

  Alignments for each domain:
  == domain 1  score: 55.6 bits;  conditional E-value: 1.1e-18
        Cmc1  2 hkklkkkarkeCaelikalaeChkdrllkvvgkCneekeamkkClkeyrtderlkdaekdriiekrle 69
                ++ ++ + r  Ca++ik +a+C+ +r++++ +kC++e++ m+kC+  y t e+  da+++++++ rl+
  KHJ33762.1 33 RDLYYSRVRGYCAAEIKSFADCALGRTFTAPFKCRKENQLMNKCMLSYATPEEQ-DAAREEWFALRLQ 99
                7788899999********************************************.********99975 PP

>> NDUF_B7  NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.5   5.3e-06     0.019      16      52 ..      40      77 ..      26      90 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 5.3e-06
     NDUF_B7 16 eRDyCAhlLiplnkCrrenfp.lpwkCehekhayekCq 52
                 R yCA+    + +C   +++ +p+kC++e    +kC 
  KHJ33762.1 40 VRGYCAAEIKSFADCALGRTFtAPFKCRKENQLMNKCM 77
                599************9876666***************5 PP

>> CX9C  CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.2   1.1e-05     0.041       5      40 ..      41      77 ..      39      80 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.1e-05
        CX9C  5 akyCpkefeaYhkCvssn.qswpekCkeqkkeLakCi 40
                  yC  e +++ +C      + p kC ++ + ++kC+
  KHJ33762.1 41 RGYCAAEIKSFADCALGRtFTAPFKCRKENQLMNKCM 77
                569*************99889***************7 PP

>> CHCH  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1     0.017        61      21      33 ..      43      55 ..      36      57 .. 0.75
   2 ?    8.5   5.0   0.00064       2.3       1      33 [.      44      77 ..      44      79 .. 0.91

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.017
                TTHHHHHHHHHHH CS
        CHCH 21 kCrkefeafkeCv 33
                 C  e++ f +C+
  KHJ33762.1 43 YCAAEIKSFADCA 55
                6777777777775 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00064
                THHHHHHHHHHHHHCTSS.TTTTHHHHHHHHHHH CS
        CHCH  1 CgeefkeylkClkdnsde.fskCrkefeafkeCv 33
                C+ e k + +C    ++    kCrke++ +++C+
  KHJ33762.1 44 CAAEIKSFADCALGRTFTaPFKCRKENQLMNKCM 77
                999999999999999998799************9 PP

>> YqzE  YqzE-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.1   0.00017       0.6      21      47 ..     100     126 ..      96     128 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00017
        YqzE  21 keeRkkkkeekkeekepfsyrwFGviP 47 
                 ++  ++kkee+++e+e+f   w G+ P
  KHJ33762.1 100 RQIEREKKEERRKEQEKFHREWWGLPP 126
                 567799******************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1229  (0.0685482); expected 358.6 (0.02)
Passed bias filter:                      596  (0.0332422); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1274.89
//
Query:       KHJ33763.1  [L=437]
Description: hypothetical protein EV44_g6125 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.15   12.1   0.0       0.34   11.0   0.0    1.6  1  HemN_C    HemN C-terminal domain


Domain annotation for each model (and alignments):
>> HemN_C  HemN C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   1.9e-05      0.34       4      37 ..     342     375 ..     339     379 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 1.9e-05
      HemN_C   4 edrleEeiilgLRlreGldlaafeqrfgldleel 37 
                  + + Eei+ gLR ++  +l+af+  f +++ ++
  KHJ33763.1 342 SENIVEEIMTGLRQQFSGPLSAFKKTFAKSWKQA 375
                 57799********************999998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       519  (0.0289475); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3230.48
//
Query:       KHJ33764.1  [L=332]
Description: putative cyclin-like f-box protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.035   13.6   0.0      0.062   12.8   0.0    1.4  1  Esterase_phd  Esterase PHB depolymerase


Domain annotation for each model (and alignments):
>> Esterase_phd  Esterase PHB depolymerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.5e-06     0.062      15     112 ..      97     188 ..      85     212 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.5e-06
  Esterase_phd  15 amplvvmlhG.ctqsveefaaGtrmnlladklGvvvlypeqslranaqkcwnwykdtdr.aGrGeaavvvalv.dalvdehrvdaarvyvaGlsaGa 108
                   +  l v+lhG   qs  +f + +  +     +Gvvvl p+       ++ w      +r  G   aa+v +l+ d l ++  +d+++v+ +G+s G+
    KHJ33764.1  97 TNGLNVLLHGdGGQSFTDFPNQAVQEN---LMGVVVLAPND------KRFWGGGSGLQRtDGEAHAAAVNSLIqDQLPQDVAFDPTKVFFTGVSGGS 184
                   556778888834678888865543333...36899998865......445665554443157888999999983679999**************998 PP

  Esterase_phd 109 alad 112
                    l +
    KHJ33764.1 185 LLLS 188
                   7644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2424.30
//
Query:       KHJ33765.1  [L=1346]
Description: putative atp-dependent rna helicase a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.9e-18   65.7   0.5    3.3e-17   62.7   0.0    2.7  3  HA2           Helicase associated domain (HA2)
    1.9e-13   50.7   0.0    5.5e-13   49.2   0.0    1.8  1  Helicase_C    Helicase conserved C-terminal domain
    1.2e-07   31.7   0.2    2.4e-07   30.7   0.2    1.5  1  DEAD          DEAD/DEAH box helicase
    0.00059   20.1   0.1     0.0029   17.9   0.1    2.2  1  AAA_22        AAA domain
     0.0038   17.3   0.2       0.03   14.5   0.0    2.4  2  Dicer_dimer   Dicer dimerisation domain
     0.0056   16.7   0.2     0.0056   16.7   0.2    2.9  3  ResIII        Type III restriction enzyme, res subunit
     0.0058   17.0   0.0      0.014   15.8   0.0    1.5  1  AAA_19        AAA domain
  ------ inclusion threshold ------
       0.03   14.8   0.0       0.12   12.9   0.0    2.0  1  ABC_tran      ABC transporter
      0.039   13.0   0.0      0.099   11.7   0.0    1.7  1  T2SSE         Type II/IV secretion system protein
      0.042   13.2   0.0      0.093   12.1   0.0    1.5  1  FtsK_SpoIIIE  FtsK/SpoIIIE family
        0.1   12.3   0.0       0.19   11.4   0.0    1.4  1  AAA_30        AAA domain
       0.12   12.1   0.0       0.33   10.7   0.0    1.7  1  AAA_29        P-loop containing region of AAA domain
       0.15   12.5   0.1       0.15   12.5   0.1    3.7  2  AAA_23        AAA domain


Domain annotation for each model (and alignments):
>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       4.8   6.7e+03      37      76 ..     191     229 ..     189     273 .. 0.65
   2 !   62.7   0.0   2.4e-20   3.3e-17       1      95 [.     948    1049 ..     948    1063 .. 0.78
   3 ?   -1.7   0.1       2.5   3.4e+03      53      89 ..    1273    1308 ..    1264    1328 .. 0.62

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 4.8
         HA2  37 LlaaaeleegcldevitivAalsveeifleeneeekeeee 76 
                 + +++++  ++ ++ ++i A+ +ve i  ++++++ +++ 
  KHJ33765.1 191 ITLGSQMRTDVYNYGASILAIPQVEIIA-KKSRSRTRSKP 229
                 5677788889999999999999965554.44444333333 PP

  == domain 2  score: 62.7 bits;  conditional E-value: 2.4e-20
         HA2    1 AlelLvalgALdeegnlTelGrkmaelPlsprlakmLlaaaeleegcldevitivAalsveeifleeneeekeeeee.........eeekakkkrke 88  
                  A+++L++lgAL++++++T+lGr +  lP++p l+km ++++ +  +cld+ +t++Aa s ++ f+++ +++ke +++         +++  + k ++
  KHJ33765.1  948 AIKDLIQLGALTRDEEITPLGRLLHSLPVDPDLGKMVVLGVIF--RCLDPLLTLAAAESEKDFFMRPISARKEADQArfsfgrntfSDAITTIKAFR 1042
                  899*************************************777..***********************99988877767666655413333333333 PP

         HA2   89 eekarrk 95  
                  +++++r+
  KHJ33765.1 1043 HARHARR 1049
                  3333333 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 2.5
         HA2   53 tivAalsveeifleeneeekeeeeeeeekakkkrkee 89  
                  +i+ +ls ++ +l+ +e++ e++++++++ +++ ++ 
  KHJ33765.1 1273 AIAQILSDSDNLLRVEEQHTEDTNDSKARIERS-DRS 1308
                  788888888888888877777766432222222.222 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.2   0.0     4e-16   5.5e-13      14     110 ..     761     883 ..     749     884 .. 0.80

  Alignments for each domain:
  == domain 1  score: 49.2 bits;  conditional E-value: 4e-16
                 TTTSEEEEEESSHHHHHH.HHHH.........HHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSH..... CS
  Helicase_C  14 eeggkilifvntidrlek.vkll.........lekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnv..... 97 
                 + +g il+f++  ++le+  k l           ++++kv+ lh+ l ++ ++  +e    g +++++at++ae++i+ip+v++Vi+ +   ++     
  KHJ33765.1 761 SLEGAILVFLPGLKDLEDvQKSLlrkpldvdfSDNNKYKVVLLHS-LMKDAQNSLFEPT-PGCRKIILATNIAETSITIPDVRHVIDTGKLNEMnfdpv 857
                 55789*********99887444424444444444449********.999999******9.9*************************7666655444556 PP

                 .............HHHHHHHTTSSST CS
  Helicase_C  98 .............tsyiqriGRtgRa 110
                              ++  qr+GR+gR+
  KHJ33765.1 858 triknlkctwaskSNSRQRSGRAGRV 883
                 6668888888888************7 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.2   1.7e-10   2.4e-07       3     170 ..     483     646 ..     481     650 .. 0.76

  Alignments for each domain:
  == domain 1  score: 30.7 bits;  conditional E-value: 1.7e-10
                 HHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   3 iQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdiv 101
                 + +e+++l+ ++  +++ +eTGsGKT+     ++++ + + +     +++  P r  a+ ++ ++     +   +++ ++g + + d ++   n+  i 
  KHJ33765.1 483 YKSEVLKLVNENTFCVIVGETGSGKTTQVPAIIFEEAIVKGKGASVNIMCTQPRRIAAKSVAIRVAYERGE---KLQDTVGYHVYLDVKRPS-NKGSIC 577
                 56789999999999************9977777766655456667799999**********9999655553...455567877777776666.999*** PP

                 EEEHHHHHHHH.HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTST.TTSEEEEEESSBS CS
                 xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx RF
        DEAD 102 vgtpgrlddll.stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgk.lqrqvivlSATlp 170
                 + t++ l++ l ++    ++ ++ +++DEa++       df+   l+++ q+    k +  +vi++SATl+
  KHJ33765.1 578 YCTTEILLKQLqNNPDEAMDTISHIIVDEAHERDIP--IDFLFITLKKVIQARRAMKkSVPKVIIMSATLN 646
                 *********884444445**************9887..555555555555555555523345*******97 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   2.1e-06    0.0029       5     103 ..     494     610 ..     491     642 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 2.1e-06
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaee...........erpevvfvtlpsstsskdllrellralglelka...................erl 73 
                  +++v++Ge+G+GKTt +  +  +  +++                               k+++ +++ + g++l +                      
  KHJ33765.1 494 NTFCVIVGETGSGKTTQVPAIIFEEAIVKGKGAsvnimctqprrI-------------AAKSVAIRVAYERGEKLQDtvgyhvyldvkrpsnkgsiCYC 579
                 6899**************999988755543222444444444440.............55555555555555555555566666666555544887777 PP

      AAA_22  74 sseellealeqalrarav.ielliiDEaqhl 103
                 ++e ll++l+++ +++++ i+ +i+DEa+  
  KHJ33765.1 580 TTEILLKQLQNNPDEAMDtISHIIVDEAHER 610
                 778888888888888888**********974 PP

>> Dicer_dimer  Dicer dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   2.2e-05      0.03      57      83 ..     142     168 ..     133     171 .. 0.91
   2 ?   -1.3   0.0       1.8   2.4e+03      58      80 ..     348     370 ..     338     375 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.2e-05
  Dicer_dimer  57 mstkklAkrsaAfeackeLhkaglLdd 83 
                   s+k lA+++aAf+   +Lh++g L+d
   KHJ33765.1 142 GSSKLLARKDAAFRLLAALHEKGILND 168
                  5899**********************8 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.8
  Dicer_dimer  58 stkklAkrsaAfeackeLhkagl 80 
                  ++ k+A++ a + a + L k++ 
   KHJ33765.1 348 RKSKEAEELAYLTAAIYLAKKQP 370
                  6789**************99875 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.6       3.1   4.3e+03      43      94 ..     265     314 ..     254     333 .. 0.47
   2 !   16.7   0.2   4.1e-06    0.0056      21     170 ..     480     646 ..     460     647 .. 0.70
   3 ?   -1.7   0.0       1.8   2.5e+03      55      96 ..    1250    1298 ..    1240    1316 .. 0.62

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.1
                 HHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B CS
      ResIII  43 klierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkk 94 
                 klie++++k+++ ++ +   + sl +   +ef  +++ ++   +++++g++ 
  KHJ33765.1 265 KLIEEYHEKENIPNTSLTKETSSLDNSRGKEFIFYYKRKV--SKTNMKGESS 314
                 3444444444444444444444444444444444443333..2333333333 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 4.1e-06
                 .............TTSEEEEEESTTSTHHHHH.HHHHHHH-S.......-EEEEESSHHHHHHHHHHGGGGTGG.....GEEEESSS-B--.......- CS
      ResIII  21 s...........krdkrglikmaTGtGKTlva.aklierllkkgkee..kflflvprkslleqtleefkkflseayke.igkkvsgdkkkakekdstnk 104
                             ++++  +i+ +TG+GKT    a + e+   kgk    +++   pr++  +    +++    e+ ++ +g  v  d k++    s++ 
  KHJ33765.1 480 MnkyksevlklvNENTFCVIVGETGSGKTTQVpAIIFEEAIVKGKGAsvNIMCTQPRRIAAKSVAIRVAYERGEKLQDtVGYHVYLDVKRP----SNKG 574
                 2444446666656666777**********99978888888888777755677777777777777767766666666555777777777777....9*** PP

                 SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.........T...TTHHHHHT---SEEEEEESS-S CS
      ResIII 105 kilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak........k...swreilekfkeavllglTATpe 170
                 +i+  t++ l +++    +++ +   d++  ii+DEaH             k   + r++++k +  +++ ++AT++
  KHJ33765.1 575 SICYCTTEILLKQL----QNNPDEAMDTISHIIVDEAHERDIPidflfitlKkviQARRAMKK-SVPKVIIMSATLN 646
                 **************....777888889999********9999765555433234444444555.3377788899976 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1.8
                  .-EEEEESSHHHH.HHHHHHGGGGTGG..........GEEEESSS-B-- CS
      ResIII   55 ekflflvprksll.eqtleefkkflseayke......igkkvsgdkkka 96  
                  + fl l+ r++ll ++++++f++ + +  ++      +++  ++d++++
  KHJ33765.1 1250 NSFLDLAKRQNLLdDRMRRNFTSAIAQILSDsdnllrVEEQHTEDTNDS 1298
                  4788888888765268889997777666555444455444444444443 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   9.8e-06     0.014       9     115 ..     493     611 ..     485     629 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 9.8e-06
      AAA_19   9 kekvllvtaGpGtGKTrvlkhiv.allvelggvkpeeillvaftgrAakelrerlaalgae....atTiHrlalldfddlltealelle.......... 92 
                 +++ +++++  G+GKT+ + +i+ ++++  g+ +  +i++  + + Aak ++ r+a   +e    +  +H    ld+++  ++  + +           
  KHJ33765.1 493 ENTFCVIVGETGSGKTTQVPAIIfEEAIVKGKGASVNIMCTQPRRIAAKSVAIRVAYERGEklqdTVGYHVY--LDVKRPSNK--GSICyctteillkq 587
                 5678899999*******99988745566666666799999999999******99954444478555555644..444444422..12222345555566 PP

      AAA_19  93 .eaeeekklqeee.llivDEfqdvd 115
                  +++ ++ + ++  ++ivDE+ + d
  KHJ33765.1 588 lQNNPDEAM-DTIsHIIVDEAHERD 611
                 666777788.5556******98877 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   8.5e-05      0.12       8      41 ..     491     524 ..     486     600 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 8.5e-05
                 EETTSEEEEEESTTSSHHHHHHHHTTSS--SEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   8 lkegekvaivGenGaGKStLlkllagllkpteGe 41 
                 ++e++  +ivGe+G+GK+t + +++ ++   +G+
  KHJ33765.1 491 VNENTFCVIVGETGSGKTTQVPAIIFEEAIVKGK 524
                 6788899**************9999888777766 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   7.2e-05     0.099     104     150 ..     470     515 ..     387     527 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 7.2e-05
       T2SSE 104 tlddlgaeealkekiaevlrkavrerglilvsGgTgsGKttllyall 150
                 +l++l  +  +++  +evl k v+e+   ++ G TgsGKtt + a++
  KHJ33765.1 470 KLRELKNSLPMNKYKSEVL-KLVNENTFCVIVGETGSGKTTQVPAII 515
                 3334444444444445555.566999999************987765 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   6.7e-05     0.093      35      81 ..     490     537 ..     467     546 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 6.7e-05
                   GGGS-.SEEEE--TTSSHHHHHHHHHHH.HHTT--TTTEEEEEE-TTS CS
  FtsK_SpoIIIE  35 lkkmashllvaGatgsGKStalntLilS.latthtPeeVqliliDykg 81 
                   l++     +++G tgsGK+t + ++i   ++++ +   V+ +++ +  
    KHJ33765.1 490 LVNENTFCVIVGETGSGKTTQVPAIIFEeAIVKGKGASVNIMCTQPRR 537
                   444445789*****************8537778888899999987765 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00014      0.19      16      97 ..     492     607 ..     483     613 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00014
      AAA_30  16 sgdrvavltGpAGtGKttalkal..reaweaa.g..grviglAptgkaAkvLaeelgi.eastiakllkrlk........................... 81 
                 +++ ++v++G  G+GKtt + a+  +ea+ +  g   +++   p   aAk +a  +   +++ ++  +  +                            
  KHJ33765.1 492 NENTFCVIVGETGSGKTTQVPAIifEEAIVKGkGasVNIMCTQPRRIAAKSVAIRVAYeRGEKLQDTVGYHVyldvkrpsnkgsicyctteillkqlqn 590
                 44569***************9998867766664755556666777888888884444333444444443333444455555555555555555555557 PP

      AAA_30  82 .grarlepgtllivDEa 97 
                    +++++ + +ivDEa
  KHJ33765.1 591 nPDEAMDTISHIIVDEA 607
                 63345666688888887 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00024      0.33      15      42 ..     486     514 ..     481     516 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00024
      AAA_29  15 htieidlkg.atlltGpsGsGKSTllDAi 42 
                 +++++  ++ +++++G++GsGK+T + Ai
  KHJ33765.1 486 EVLKLVNENtFCVIVGETGSGKTTQVPAI 514
                 5666665666899***********98887 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   3.5       3.2   4.4e+03      90     183 ..     169     278 ..     130     290 .. 0.59
   2 ?   12.5   0.1   0.00011      0.15       9      39 ..     482     514 ..     478     516 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 3.2
      AAA_23  90 iererelskkkgkttkkaklellei.deleqfisellgskki..ilnlilflgqer...........feefel..kdkkerleelekeleeledekkll 172
                 i+re+ ++k+k++  + +++e ++  ++ +  + ++  s  +  + ++i+ +  +r            + +e+  + +++    +++el+  ++++kl+
  KHJ33765.1 169 ISREIVEYKDKKSASQIEEKETITLgSQMRTDVYNYGASILAipQVEIIAKKSRSRtrskpsgytvtLKLEERniEIEESGASLVKTELKVYSKFRKLI 267
                 555555556555555555555444446666666654443333223333333333336666666666522223312222335566788888888888888 PP

      AAA_23 173 ekleqekekek 183
                 e+ +++++  +
  KHJ33765.1 268 EEYHEKENIPN 278
                 88877766554 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 0.00011
      AAA_23   9 sfrdqeidF..skgltlItGpNGaGKTTildAi 39 
                 +++ + + +  ++ + +I+G++G+GKTT + Ai
  KHJ33765.1 482 KYKSEVLKLvnENTFCVIVGETGSGKTTQVPAI 514
                 5677777777677888************77776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       930  (0.0518713); expected 358.6 (0.02)
Passed bias filter:                      611  (0.0340789); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.93u 0.30s 00:00:01.23 Elapsed: 00:00:00.48
# Mc/sec: 8493.30
//
Query:       KHJ33766.1  [L=399]
Description: putative acetyl- acetyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.1e-93  310.9   0.1      1e-92  310.2   0.1    1.4  1  Thiolase_N     Thiolase, N-terminal domain
      1e-45  154.3   0.9    2.9e-45  152.9   0.9    1.8  1  Thiolase_C     Thiolase, C-terminal domain
    1.5e-05   24.8   0.3    3.1e-05   23.7   0.3    1.6  1  ketoacyl-synt  Beta-ketoacyl synthase, N-terminal domain
  ------ inclusion threshold ------
      0.013   15.3   0.4        0.5   10.2   0.0    2.9  3  ACP_syn_III    3-Oxoacyl-[acyl-carrier-protein (ACP)] synthas


Domain annotation for each model (and alignments):
>> Thiolase_N  Thiolase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  310.2   0.1   2.3e-96     1e-92       1     260 []       6     268 ..       6     268 .. 0.97

  Alignments for each domain:
  == domain 1  score: 310.2 bits;  conditional E-value: 2.3e-96
                 EEEEEEEEE--EETTSTTTTS-HHHHHHHHHHHHHHHHT.S-GGGCCEEEEEHSSCTTSTSCHHHHHHHHTTS-TTSEEEEEEHGGGHHHHHHHHHHHH CS
  Thiolase_N   1 vvivsaartpigkfggslkdlsaeeLlaealkallekag.vdpeevdevivGnvlqagegqniarqaalkagipeevpavtvnkvcsSglkavalaaqs 98 
                 v++vsa+rtp+g+f gsl++lsa+eL++ a+ka+lek + ++p++vde+++Gnvl+a+ gqn++rq a+ ag++e+++++tvnkvc+Sglkav+l+aq 
  KHJ33766.1   6 VYVVSAVRTPVGSFLGSLSSLSATELGSLAVKAALEKIPeINPHQVDELFFGNVLSANLGQNPSRQCAILAGLSESTVCTTVNKVCASGLKAVILGAQT 104
                 89************************************************************************************************* PP

                 HHTTSHSEEEEEEEEESTTS-EEETCTTTTGGSSSSEEEEEHHHHHHTEETT.TTSEHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTT CS
  Thiolase_N  99 iaageadvvvagGvEsmsnaptaestdvrsglklgdekakdllipdgladaf.neehmGltaenlakkykisReeqdefAvkshqkaaaaqkagkFkde 196
                 i +g+a++vvagG+Esmsn+p++++ ++r g+k+g+++++d +++dgl+da+ n+ehmGl++e++a ++ isReeqd++A++s+q+a+ + ++g Fk+e
  KHJ33766.1 105 ILTGNAEIVVAGGTESMSNVPHYHP-NLRMGTKYGNQTLVDGILKDGLTDAYgNKEHMGLAGEECALTHSISREEQDNYAIESYQRAQMSHEKGYFKNE 202
                 ************************9.*************************95679******************************************* PP

                 BE-EEEEESSSE.E.EE-S-TTS-TT--HHHHHTS-BSSSTT.SS-BTTSB--BEEEEEEEEEEEHH CS
  Thiolase_N 197 ivPvkvkgkkgk.k.tvdkdeairsevtaekLaklkpaFkke.GtvtAgnasqisDGaaavllmses 260
                 ivPv+v+g +gk + ++++d+++++ +++ekL++++paFk++ Gt+tA na +i+DGa+a++l+se+
  KHJ33766.1 203 IVPVTVTGGRGKpSiIITTDDEVKN-LNIEKLRAMRPAFKSDsGTITAPNAAPINDGASALVLVSEQ 268
                 ************9537777777776.**************************************985 PP

>> Thiolase_C  Thiolase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.9   0.9   6.4e-49   2.9e-45       1     122 [.     275     396 ..     275     397 .. 0.99

  Alignments for each domain:
  == domain 1  score: 152.9 bits;  conditional E-value: 6.4e-49
                 ---SEEEEEEEEEE--GGGGGGHHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHHHHT--GGGBSTT--HHHH-B-TTTHHHHHHHHHHHHHHH CS
  Thiolase_C   1 lkplakirsyaevgvdpeilglgPayaikkvlkkagltvedidlfEinEAFaaqaLavakaldldlekvNvnGGaialGHPlGasGaRivvtllselkk 99 
                 lkplaki  + e++ +p++++++Pa ai+k+l++a ++ +++d++EinEAF+++aLa++k l+ld+++vNv+GG++a+GHPlG+sGaRi++tl++ l++
  KHJ33766.1 275 LKPLAKILGWGEAADTPKKFTTAPALAIPKALNHAKINASNVDFYEINEAFSVVALANMKILGLDASRVNVHGGSVAIGHPLGCSGARILTTLINVLRQ 373
                 589************************************************************************************************ PP

                 CTTSEEEEEEEETTTEEEEEEEE CS
  Thiolase_C 100 eggklgvaalCigggqgvalvie 122
                 ++gk+gvaa+C+ggg ++alvie
  KHJ33766.1 374 QNGKIGVAAICNGGGGASALVIE 396
                 *********************98 PP

>> ketoacyl-synt  Beta-ketoacyl synthase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.3   6.9e-09   3.1e-05     168     207 ..      84     123 ..       8     140 .. 0.69

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 6.9e-09
                    EEEEESGGGHHHHHHHHHHHHHHTTS-SEEEEEEEE---S CS
  ketoacyl-synt 168 svtvdtACsSslvavhaavqslrsgeadvalaGGvelllt 207
                      tv   C+S+l+av +  q + +g+a++++aGG+e + +
     KHJ33766.1  84 CTTVNKVCASGLKAVILGAQTILTGNAEIVVAGGTESMSN 123
                    4577889*****************************9876 PP

>> ACP_syn_III  3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   0.00011       0.5       3      43 ..      87     127 ..      86     137 .. 0.90
   2 ?    1.3   0.0     0.069   3.1e+02      53      65 ..     256     268 ..     247     276 .. 0.79
   3 ?   -1.7   0.1      0.59   2.6e+03      51      62 ..     385     396 ..     360     397 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00011
                  EE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGCS-T CS
  ACP_syn_III   3 lnaaCsgfvyalsvAdaliesgaakrvLvigaetlskilDw 43 
                  +n++C++ + a+ + ++ i +g+a+ v+  g+e +s++ ++
   KHJ33766.1  87 VNKVCASGLKAVILGAQTILTGNAEIVVAGGTESMSNVPHY 127
                  789********************************997655 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.069
                  -EEEEEEEEEEES CS
  ACP_syn_III  53 GDGAgAvvlease 65 
                   DGA A+vl  ++
   KHJ33766.1 256 NDGASALVLVSEQ 268
                  6*******98864 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.59
                  TB-EEEEEEEEE CS
  ACP_syn_III  51 lfGDGAgAvvle 62 
                  + G GA A+v+e
   KHJ33766.1 385 NGGGGASALVIE 396
                  446788888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       441  (0.024597); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.46
# Mc/sec: 2624.54
//
Query:       KHJ33767.1  [L=111]
Description: hypothetical protein EV44_g3816 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       220  (0.0122706); expected 358.6 (0.02)
Passed bias filter:                      201  (0.0112109); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 867.70
//
Query:       KHJ33768.1  [L=161]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
          2    8.5  18.1         13    5.9  18.1    2.1  2  DZR             Double zinc ribbon
        8.6    6.9  16.2         10    6.7   6.2    2.2  2  Cytochrom_c3_2  Cytochrome c3


Domain annotation for each model (and alignments):
>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   1.1     0.039   3.5e+02      24      35 ..      46      57 ..      29      66 .. 0.75
   2 ?    5.9  18.1    0.0014        13       1      48 [.      53     106 ..      43     107 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.039
         DZR 24 avaaedrCpsCg 35
                +  ++ +C +C+
  KHJ33768.1 46 PRDQPVVCTKCH 57
                444478888887 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0014
         DZR   1 CpqCgee....lppdarfCseCgtklkavaa..edrCpsCgekvdpearfCpeC 48 
                 C +C+      + +++  C++C ++l   +   ++rC +C  +  ++++ Cp+C
  KHJ33768.1  53 CTKCHGFhtarNCARNPKCKNCSSDLHDGPCikPIRCLNCRGPHASDDKNCPAC 106
                 777875522224444449********8555599********************* PP

>> Cytochrom_c3_2  Cytochrome c3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   6.2    0.0011        10      56      78 ..      48      74 ..      37      76 .. 0.72
   2 ?    5.2   2.4    0.0032        29      56      78 ..      84     106 ..      75     108 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0011
                    TSSS-GGGTS-TTTSBT....-GGGGT CS
  Cytochrom_c3_2 56 ekeleCteCHkeHkkse....kvCaeC 78
                    ++ + Ct+CH  H++++      C++C
      KHJ33768.1 48 DQPVVCTKCHGFHTARNcarnPKCKNC 74
                    566778888888886555555778888 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0032
                     TSSS-GGGTS-TTTSBT-GGGGT CS
  Cytochrom_c3_2  56 ekeleCteCHkeHkksekvCaeC 78 
                      k ++C +C   H ++ k C  C
      KHJ33768.1  84 IKPIRCLNCRGPHASDDKNCPAC 106
                     57899***************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       714  (0.0398237); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1240.98
//
Query:       KHJ33769.1  [L=106]
Description: hypothetical protein EV44_g1748 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 791.96
//
Query:       KHJ33770.1  [L=220]
Description: hypothetical protein EV44_g3806 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-05   23.2   0.4    0.00013   21.8   0.4    1.9  1  Chromo    Chromo (CHRromatin Organisation MOdifier) domain
  ------ inclusion threshold ------
       0.15   12.8   0.0       0.38   11.5   0.0    1.6  1  LIN52     Retinal tissue protein


Domain annotation for each model (and alignments):
>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.4   1.5e-08   0.00013       1      33 [.     124     154 ..     124     173 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 1.5e-08
                 EEEEEEEEEEEETTEECEEEEEEETTSTGGGTE CS
      Chromo   1 yeVerIidhrtdkdgleleYlVKWkglpysent 33 
                 +eVe I+++r+  ++l  +Y V+W+g++ +++ 
  KHJ33770.1 124 WEVENILSSRIYYGKL--HYMVQWRGWDTDSEY 154
                 79**************..*********998765 PP

>> LIN52  Retinal tissue protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   4.2e-05      0.38      61      87 ..      64      90 ..      57      93 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.2e-05
       LIN52 61 eqLlekvkelqdlayqLgleEskemtr 87
                + L  k+k +++++y+Lgl E+  m+r
  KHJ33770.1 64 TRLSYKIKAMREYSYELGLPENWRMSR 90
                567789****************99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       336  (0.0187406); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1709.83
//
Query:       KHJ33771.1  [L=482]
Description: putative camp-specific 3 -cyclic phosphodiesterase 7b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-58  197.6   0.1    4.9e-58  196.7   0.1    1.5  1  PDEase_I  3'5'-cyclic nucleotide phosphodiesterase


Domain annotation for each model (and alignments):
>> PDEase_I  3'5'-cyclic nucleotide phosphodiesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  196.7   0.1   2.7e-62   4.9e-58       1     237 [.     212     468 ..     212     469 .. 0.89

  Alignments for each domain:
  == domain 1  score: 196.7 bits;  conditional E-value: 2.7e-62
                 SSSHHHHHHHHHHHHHHHHCCHCCCC..................S-HHHHHHHHHHHHHTTTT--S--HHHHHHCT-HHHHHCCCSSHHHHHHHHHHHH CS
    PDEase_I   1 YHNfrHAadVlqalfyllkkeklkee..................ltpleilalliaalcHDvdHpGtnNsFlvnskselailYndesvLEnhHlalafq 81 
                 YHNfrHA+d lqa+f++l + +  ++                  ++p ++l+lli a++HD++HpG+nN+Fl+  +++la+lYn++svLE++H  ++ q
  KHJ33771.1 212 YHNFRHAVDTLQACFIFLIRLGRIPSfpdmkielssqsstlaetIRPYDALTLLITAIGHDIGHPGVNNAFLTTLNAPLAQLYNNRSVLESFHSVAFSQ 310
                 ******************87776666799********************************************************************** PP

                 HHTSGGG-TTTTS-HHHHHHHHHHHHHHHHTTSGGGHHHHHHHHHHHCCTTS-TTTCT.......-HHHHHHHHHHHHHHHHTGCCCS-HHHHHHHHHH CS
    PDEase_I  82 llkkeecnifknlskeeykelrkliielIlaTdmakhfelleklkelvkkkeknslnke......eeedkklllsllikaaDisnptkpweiskkwael 174
                 +l+ +  ++f++      ke+r+l+++ IlaTd   h e+++kl +++++    +++ +        e ++++++l++k+aDisn+++++ei++ wa +
  KHJ33771.1 311 MLRCHWPSVFQT------KEMRQLMVNTILATDKDLHSEYVKKLARINENIISANTSANnsaqlsPGELRTFACALIMKCADISNVARNFEIASLWAVI 403
                 **8775555555......59************************88888665555544456677666777799************************** PP

                 HHHHHHHHHHHHHHCT----..GGGTSSC...HHHHHHHHHHTHHHHHHHHHHC-GGGHHHHHHH CS
    PDEase_I 175 vleEffeqgdeekelglpvs..plmdrektslaksqigFidfvvkplfealakllpelkelldel 237
                 +++Ef +   + ke+g++    +   re + l ksqi+Fi+  + plf+ +a+++p l+ +++el
  KHJ33771.1 404 LTDEFSRRVAMGKEMGISSAllAPPIREIAALGKSQIDFIETYAYPLFDGIAEVMPALSFCVEEL 468
                 *****************9996633444445777**************************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       625  (0.0348597); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3605.50
//
Query:       KHJ33772.1  [L=591]
Description: putative serine threonine-protein kinase nrc-2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-75  254.5   0.0    1.5e-75  253.9   0.0    1.2  1  Pkinase         Protein kinase domain
    7.5e-31  107.3   0.0    7.6e-22   77.8   0.0    2.1  2  Pkinase_Tyr     Protein tyrosine kinase
    1.3e-07   31.3   0.0       0.17   11.2   0.0    3.2  3  Kinase-like     Kinase-like
    0.00086   18.2   0.1     0.0018   17.1   0.0    1.5  2  Pkinase_fungal  Fungal protein kinase
  ------ inclusion threshold ------
      0.014   15.3   0.0       0.23   11.3   0.0    2.1  2  APH             Phosphotransferase enzyme family
      0.051   12.9   0.0      0.093   12.1   0.0    1.3  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  253.9   0.0   5.2e-79   1.5e-75       2     264 .]     218     507 ..     217     507 .. 0.95

  Alignments for each domain:
  == domain 1  score: 253.9 bits;  conditional E-value: 5.2e-79
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH..HHSS--H CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladlle..rkgslse 97 
                  +++ +G+G++GkVy ++ek++++ +A+K+++k+++ k+++ k++l+E +il++++hp+iv+ly++f+++d+lyl++ey++gge++++l+    ++++e
  KHJ33772.1 218 DTIKLIGKGDVGKVYLVREKKSSRLYAMKVLSKKEMIKRNKiKRALAEQEILATSNHPFIVTLYHSFQSEDHLYLCMEYCSGGEFFRALQtrPGKCIPE 316
                 57899******************************9999999************************************************855566*** PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS............................BCTTTSCGGGS-HHH CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk............................ltsfvgtseYlAPEv 168
                 ++a+++a++++++leylH +g+i+rDlKpeNiL++++g+++++DF+l+k+ + + k                            ++sfvgt+eY+APEv
  KHJ33772.1 317 DDARFYAAEVIAALEYLHLMGFIYRDLKPENILLHQSGHIMLSDFDLSKQSDPGGKptmilsrhgpstnslptidtrscianfrTNSFVGTEEYIAPEV 415
                 ******************************************************99******************************************* PP

                 HTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT....HHHHHTSGG CS
     Pkinase 169 lkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt....aeellqhpy 263
                 +k+ +++++vD+W+lG+++ye+l+g++pf+g++++ ++++++++     ++      +    s+is+ +k+l++kll kd+++Rl+    a+++++hp+
  KHJ33772.1 416 IKGCGHTSAVDWWTLGILIYEMLYGTTPFKGKNRNATFANIMKD-----EVA---FPDHSGSSQISNLCKSLIRKLLIKDENRRLGaragASDVKAHPF 506
                 **********************************9999999998.....222...2356677999********************97877889999999 PP

                 G CS
     Pkinase 264 l 264
                 +
  KHJ33772.1 507 F 507
                 7 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.8   0.0   2.5e-25   7.6e-22       4     153 ..     220     367 ..     217     376 .. 0.90
   2 !   27.4   0.0   6.4e-10   1.9e-06     170     236 ..     409     474 ..     398     492 .. 0.77

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 2.5e-25
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEE..STTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTT CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtl..keeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekek 99 
                   k +G+G  GkV+  + k    k++   a+K+l  ke  ++++ ++ l e +i+ + +hp iv l+    +e++l++ +ey++gG++   L+++  + 
   KHJ33772.1 220 IKLIGKGDVGKVYLVREK----KSSRLYAMKVLskKEMIKRNKIKRALAEQEILATSNHPFIVTLYHSFQSEDHLYLCMEYCSGGEFFRALQTRPGKC 313
                  688**********99999....5556666676632456667778999***********************************************9999 PP

                  SBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET CS
  Pkinase_Tyr 100 ltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi 153
                  +  +d   +a++v +++eyL+ + ++ rdl   N+Ll+++ ++ +sDf L+++ 
   KHJ33772.1 314 IPEDDARFYAAEVIAALEYLHLMGFIYRDLKPENILLHQSGHIMLSDFDLSKQS 367
                  99999999*******************************************986 PP

  == domain 2  score: 27.4 bits;  conditional E-value: 6.4e-10
                  GGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHH CS
  Pkinase_Tyr 170 kWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelye 236
                  +++apE++k +  ts+ D W  G+l++E++  g +p++g + + +++++ +++     ++ ++++ +
   KHJ33772.1 409 EYIAPEVIKGCGHTSAVDWWTLGILIYEMLY-GTTPFKGKNRNATFANIMKDEVAFPDHSGSSQISN 474
                  799**************************98.********666666666555444434444555555 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.0    0.0032       9.6      16      66 ..     219     270 ..     209     292 .. 0.87
   2 !   11.2   0.0   5.7e-05      0.17     146     189 ..     320     362 ..     301     371 .. 0.87
   3 !   10.8   0.0   7.3e-05      0.22     228     288 .]     422     491 ..     415     491 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0032
  Kinase-like  16 rgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdler.lkeqelai 66 
                    +l++kgd ++v++v++++     a+kv + ++   +++++r l eqe+++
   KHJ33772.1 219 TIKLIGKGDVGKVYLVREKKSSRLYAMKVLSKKEMIKRNKIKRaLAEQEILA 270
                  5689******************************999**9998456666655 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 5.7e-05
  Kinase-like 146 rlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggft 189
                  r +  +++i    +L+  g +  +++++n+ll++ g +ml +f+
   KHJ33772.1 320 RFYA-AEVIAALEYLHLMGFIYRDLKPENILLHQSGHIMLSDFD 362
                  5554.78999999*****************************96 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 7.3e-05
  Kinase-like 228 thkldaWqlGlviyriwclklPltlateeakeew.........kfklckkipekvkaLlkkfLqlsqedR 288
                  t ++d W+lG+ iy +   + P+  +  +a  +          + +   +i++  k L++k+L  ++++R
   KHJ33772.1 422 TSAVDWWTLGILIYEMLYGTTPFKGKNRNATFANimkdevafpDHSGSSQISNLCKSLIRKLLIKDENRR 491
                  7899*******************99988887766788888888888888999999999999999988887 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.2       1.1   3.4e+03     214     248 ..     108     155 ..     100     211 .. 0.55
   2 !   17.1   0.0   6.1e-07    0.0018     314     395 ..     325     425 ..     321     430 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.1
  Pkinase_fungal 214 kdddiaeiRkgldvtkaekfrskrkvvsssssqe.............l 248
                     kdd + ++R+  +  +a+++ +k++  ++++ ++             +
      KHJ33772.1 108 KDDLTRKLRRVSSAPNAQSLPTKKNGKTNRPATAelgkgelslnflkS 155
                     334447777777777776666666655555554445554444444431 PP

  == domain 2  score: 17.1 bits;  conditional E-value: 6.1e-07
  Pkinase_fungal 314 DaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddsses....gare.......................rtGTleFm 381
                     ++I++++ L+   g++ rD   +Nil+      ++ + +L+D+Dl k+ +   +         +                        +GT e++
      KHJ33772.1 325 EVIAALEYLH-LMGFIYRDLKPENILLH-----QSGHIMLSDFDLSKQSDPGGKPTmilsR--HgpstnslptidtrscianfrtnsFVGTEEYI 411
                     79********.9****************.....7899************965444455540..14555556666666666666666699****** PP

  Pkinase_fungal 382 aievlkgeeHsyrh 395
                     a ev+kg+ H+   
      KHJ33772.1 412 APEVIKGCGHTSAV 425
                     *******99*9765 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.075   2.2e+02       3      84 ..     221     304 ..     219     312 .. 0.74
   2 ?   11.3   0.0   7.7e-05      0.23     145     201 ..     320     369 ..     304     371 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.075
                 EEE--.SSCEEEEEEETT..--EEEEEE-TT..S-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SS CS
         APH   3 relsggasnrtylvttpa..gryvlrrnppa..raaeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllr 84 
                 + ++ g   ++ylv +++  + y++++ +++     ++i r +a+   La ++ p  + l+   + + + +l++ +ey+ g  + r
  KHJ33772.1 221 KLIGKGDVGKVYLVREKKssRLYAMKVLSKKemIKRNKIKRALAEQEILATSNHPFIVTLY--HSFQSEDHLYLCMEYCSGGEFFR 304
                 5667777778999999997569999998888888999999999999999988776555555..46666666667888888877766 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 7.7e-05
                 HHHHHHHHHHHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EEEEC CS
         APH 145 leeleeqvlaalaallpgelptvllHgDlhpgNllvdpddgrvtGviDfedaglgpp 201
                 +  ++e v+aal+ l +    ++++ +Dl+p N+l+++  g++  + Df++++ ++p
  KHJ33772.1 320 RFYAAE-VIAALEYLHL----MGFIYRDLKPENILLHQS-GHI-MLSDFDLSKQSDP 369
                 667777.8999998888....9***************55.555.4779999988877 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.1e-05     0.093     127     173 ..     326     368 ..     311     373 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.1e-05
         Kdo 127 vgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldkarlrl 173
                 v ++ + lh +g   +dl + nill+q +    +i+l D+d +++  
  KHJ33772.1 326 VIAALEYLHLMGFIYRDLKPENILLHQSG----HIMLSDFDLSKQSD 368
                 55667889*********************....********888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (591 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 4287.73
//
Query:       KHJ33773.1  [L=927]
Description: putative histone acetyltransferase mst2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.8e-74  248.7   0.0    4.5e-74  248.0   0.0    1.3  1  MOZ_SAS         MOZ/SAS family
    1.3e-19   69.5   3.1    1.3e-19   69.5   3.1    2.1  2  zf-MYST         MYST family zinc finger domain
    2.9e-08   33.7  10.4    5.8e-08   32.7   9.1    2.3  2  PHD_4           PHD-finger
  ------ inclusion threshold ------
      0.012   15.4   9.8      0.012   15.4   9.8    2.2  2  PHD             PHD-finger
      0.029   14.0   0.0      0.056   13.1   0.0    1.5  1  GntR            Bacterial regulatory proteins, gntR family
      0.051   14.0   0.0       0.14   12.6   0.0    1.7  1  Acetyltransf_7  Acetyltransferase (GNAT) domain
       0.37   10.7   5.9      0.058   13.3   1.2    2.1  2  C1_1            Phorbol esters/diacylglycerol binding domain 


Domain annotation for each model (and alignments):
>> MOZ_SAS  MOZ/SAS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.0   0.0   1.8e-77   4.5e-74       1     173 [.     547     721 ..     547     725 .. 0.97

  Alignments for each domain:
  == domain 1  score: 248.0 bits;  conditional E-value: 1.8e-77
     MOZ_SAS   1 ppGkeiYrkeklsvfevdGekeklycqnLcllaklFldhktlyydvepFlfYvlteadeegahivGyFskekesaeeynlaCilvlPpyqrkgyGklli 99 
                 ppG+eiYr+ +++vfevdG+k++lycqnLcllaklFl +ktlyydvepFlfYv+te+d+ g+h+vGyFskek  ++ +n++CilvlP +q+kgyG+lli
  KHJ33773.1 547 PPGDEIYRDGNVAVFEVDGRKNTLYCQNLCLLAKLFLGSKTLYYDVEPFLFYVMTEYDQYGCHFVGYFSKEKRPSSLNNVSCILVLPIHQQKGYGHLLI 645
                 8************************************************************************************************** PP

     MOZ_SAS 100 efsYeLskrekkigtPekPlsdlgllsyrsywkeeilellkek..ekkkisieeisektgikeeDiistleelkll 173
                 +fsY L+++ekk+g+PekPlsd+gl+syr+yw+ +++++lk+    +k  si+eis+++g++ +D+is+l++l +l
  KHJ33773.1 646 DFSYLLTRVEKKTGSPEKPLSDMGLVSYRNYWRLVLCRYLKDFkpGDKIPSIREISDSMGLTPDDVISALDALGTL 721
                 *****************************************985546778********************998765 PP

>> zf-MYST  MYST family zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.5   3.1   5.1e-23   1.3e-19       3      55 .]     490     542 ..     488     542 .. 0.98
   2 ?   -3.9   0.1       4.4   1.1e+04      29      39 ..     567     577 ..     565     579 .. 0.85

  Alignments for each domain:
  == domain 1  score: 69.5 bits;  conditional E-value: 5.1e-23
     zf-MYST   3 niekieiGeyeiktWYfSpYPeelankekLyvCefClkYmksakelerHkkkC 55 
                 +ie+ie+G+++i+ WY +pYPee+++++ L++Ce+ClkYm+s+  + rH+kkC
  KHJ33773.1 490 EIEYIEFGKFQIDVWYDAPYPEEYSRNKALFICEYCLKYMESDIVAWRHTKKC 542
                 699************************************************** PP

  == domain 2  score: -3.9 bits;  conditional E-value: 4.4
     zf-MYST  29 kekLyvCefCl 39 
                 k++Ly+ + Cl
  KHJ33773.1 567 KNTLYCQNLCL 577
                 789***99998 PP

>> PHD_4  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   9.1   2.2e-11   5.8e-08       5      67 ..     145     200 ..     141     201 .. 0.92
   2 ?   -2.4   0.0       2.1   5.4e+03      20      39 ..     509     528 ..     502     536 .. 0.72

  Alignments for each domain:
  == domain 1  score: 32.7 bits;  conditional E-value: 2.2e-11
       PHD_4   5 aaCivCgedgkedevveeesetpsslmeCsvCyeivHpeClkekegegvvnedlpnsWeCpkC 67 
                 ++Ci+C++d+++d     +se+ + ++ C +C + +H++C+++  ++ +  ed  + W C +C
  KHJ33773.1 145 NCCIFCNKDEEND-----PSEEFEIYLACGICGDNAHKQCARN--ANALQIEDEGETWYCVEC 200
                 79***********.....7999*******************99..7789999*********** PP

  == domain 2  score: -2.4 bits;  conditional E-value: 2.1
       PHD_4  20 veeesetpsslmeCsvCyei 39 
                   ee + +++l+ C+ C + 
  KHJ33773.1 509 YPEEYSRNKALFICEYCLKY 528
                 55556778889999999765 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   9.8   4.9e-06     0.012       2      50 ..     147     201 ..     146     203 .. 0.75
   2 ?   -1.4   0.1      0.87   2.2e+03      38      50 ..     514     526 ..     508     528 .. 0.65

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4.9e-06
                 BTTTTS.....TTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSS.TBSSTTTH CS
         PHD   2 CavCkk.....ksdeeeelvqCdgCkrwfHqkClkppleseekpeg.ewlCekCk 50 
                 C +C+k      s+e e  + C  C++  H++C +     + ++eg  w+C +C 
  KHJ33773.1 147 CIFCNKdeendPSEEFEIYLACGICGDNAHKQCARNANALQIEDEGeTWYCVECL 201
                 999***874322223445699*************9987755555557*******7 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.87
                 SHHSSTBSSTTTH CS
         PHD  38 ekpegewlCekCk 50 
                 ++ +  ++Ce C 
  KHJ33773.1 514 SRNKALFICEYCL 526
                 4445578888885 PP

>> GntR  Bacterial regulatory proteins, gntR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   2.2e-05     0.056      17      48 ..     687     718 ..     685     730 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2.2e-05
                 SS-TTSB---HHHHHHHHTS-HHHHHHHHHHH CS
        GntR  17 elrpGdkLPsereLaaefgVsrttvReALrrL 48 
                  ++pGdk+Ps re+++ +g +   v  AL+ L
  KHJ33773.1 687 DFKPGDKIPSIREISDSMGLTPDDVISALDAL 718
                 699*****************999998888877 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   5.5e-05      0.14      24      48 ..     617     647 ..     593     673 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 5.5e-05
                     S......TCTEEEEE-GGGTTSSHHHHHHHH CS
  Acetyltransf_7  24 d......aeitrlaVdpeyrgkGiGraLlea 48 
                     +       +  ++ V+p ++ kG+G+ L+++
      KHJ33773.1 617 EkrpsslNNVSCILVLPIHQQKGYGHLLIDF 647
                     13444333444499****************8 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.2   2.3e-05     0.058       8      47 ..     141     184 ..     137     189 .. 0.86
   2 ?   -3.1   0.2       2.9   7.4e+03      14      21 ..     522     529 ..     516     543 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.3e-05
                 -SS--B-TTT-SB-....-SSSS-EEEETTT--EE-CCCCTTS- CS
        C1_1   8 fkqptfCkhCgefl....wgkekqglkCswCkllvHkkChekvp 47 
                 + +p+ C  C++      ++++   l+C  C+ ++Hk+C+++++
  KHJ33773.1 141 LASPNCCIFCNKDEendpSEEFEIYLACGICGDNAHKQCARNAN 184
                 5678999999999899966699999****************987 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.9
                 -TTT-SB- CS
        C1_1  14 CkhCgefl 21 
                 C++C + +
  KHJ33773.1 522 CEYCLKYM 529
                 88887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (927 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       813  (0.0453455); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.69u 0.25s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 6470.20
//
Query:       KHJ33774.1  [L=211]
Description: putative peptidyl-prolyl cis-trans isomerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.9e-44  150.7   0.5    4.7e-44  150.4   0.5    1.1  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.4   0.5   2.6e-48   4.7e-44       3     157 ..      54     208 ..      52     209 .. 0.85

  Alignments for each domain:
  == domain 1  score: 150.4 bits;  conditional E-value: 2.6e-48
  Pro_isomerase   3 dietsskGrivieLfadkaPktvenFlklvkeg....fYdgttFhRvikgfmvqgGdptgktsageqe.kkggesiraipdEitsklkh.krGala 92 
                    +ie +  G+i+++Lf++++P tvenF++l+ +g     Y+g++FhR+i++fm+qgGd+t ++  g++  +  g   ++++dE+ +klkh k+G+l+
     KHJ33774.1  54 KIEKQ-SGTIKFNLFQQDVPLTVENFRALC-TGekgfGYKGSAFHRIIPQFMLQGGDFTRGN--GTGGkSIYG---EKFKDEN-FKLKHnKPGLLS 141
                    67774.9***********************.5668899*******************99984..443323333...69*****.78888799**** PP

  Pro_isomerase  93 martgkepnsagsqFfItlkeaphldgkytvFGkVv..eGmdvvekiekvetde..erpkknvkivsae 157
                    ma++g   n++gsqFfIt+  +++ldgk++vFG+V   e+m+vv+++e++ +++     +++ +i++++
     KHJ33774.1 142 MANSG--VNTNGSQFFITTVVTSWLDGKHVVFGEVAdeESMRVVKALEATGSSNgnISYTNKPVITDCG 208
                    ****8..7****************************99***********76666554444447788776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       412  (0.0229795); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1529.48
//
Query:       KHJ33775.1  [L=254]
Description: putative pf02656 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-17   64.2   0.7    1.1e-17   64.2   0.7    2.1  2  DUF202    Domain of unknown function (DUF202)


Domain annotation for each model (and alignments):
>> DUF202  Domain of unknown function (DUF202)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.2   0.7   6.3e-22   1.1e-17       7      68 .]     133     217 ..     132     217 .. 0.90
   2 ?   -0.6   0.6      0.11   1.9e+03      41      54 ..     234     247 ..     226     251 .. 0.51

  Alignments for each domain:
  == domain 1  score: 64.2 bits;  conditional E-value: 6.3e-22
      DUF202   7 ERTfLaWlRtslalialglallrffl.......................tgepsalgkilglilivlgiltllvglvrylrrqra 68 
                 ERTfLaWlRtsla++++g+a++++f+                       +++  +lgk+lg+++i+++++tll+g  ry++ q++
  KHJ33775.1 133 ERTFLAWLRTSLAFASIGIAITQLFRlssmrskniandnretililndaSQQIRRLGKPLGTTFIGISTITLLLGSNRYFECQKW 217
                 **************************999999999988888888877776666668************************98875 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.11
      DUF202  41 kilglilivlgilt 54 
                 +i+ l+l+++++++
  KHJ33775.1 234 VIATLALMITSLFV 247
                 33444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1838.52
//
Query:       KHJ33776.1  [L=1502]
Description: putative TFIId subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-07   30.8   0.0     0.0013   18.9   0.0    2.8  2  Peptidase_M1_N  Peptidase M1 N-terminal domain
  ------ inclusion threshold ------
      0.053   13.9   0.0        1.8    9.0   0.0    3.0  2  HEAT_2          HEAT repeats


Domain annotation for each model (and alignments):
>> Peptidase_M1_N  Peptidase M1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0   0.00021       1.9       3      63 ..      25      82 ..      23      96 .. 0.86
   2 !   18.9   0.0   1.5e-07    0.0013     121     149 ..     225     253 ..     148     282 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00021
                    EEEEEEEEEETTTTEEEEEEEEEEEES.S-ECEEEEEESSEEEECEEEEECTTCTCEEEEEE CS
  Peptidase_M1_N  3 ehYdldlkidlkektfkGsvtitlqlk.eatseivldakdlkiksvslsaevksesvkidfk 63
                    +h ++dl+id++++++kG++ it+ ++  + + i lda++  i    l +ev +++v+++  
      KHJ33776.1 25 SHQKVDLDIDFSTQSLKGRCGITILPQsLDLRLIRLDARQCSI----LESEVFINGVPASYF 82
                    5789***********************8899************....667777777777655 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 1.5e-07
                     E-TTTTGGGTS-B--STTSEBEEEEEEEE CS
  Peptidase_M1_N 121 qfeatdARsafPCfDePsvKAtftisika 149
                     ++++  A+ +fPC+D+Ps++ t++isi+ 
      KHJ33776.1 225 NLDPGTASCIFPCIDNPSMRCTWDISIRC 253
                     468999********************985 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.074   6.6e+02      45      71 ..     894     926 ..     887     933 .. 0.55
   2 ?    9.0   0.0    0.0002       1.8       4      53 ..    1048    1101 ..    1047    1145 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.074
      HEAT_2  45 pavRraaaeaLgaigdpe......alpaLkell 71 
                  +v +a++++L++i+ ++      a  +L++ll
  KHJ33776.1 894 YNVEKAIVRSLSQIRAKDgtcpmeARHFLLDLL 926
                 467777777777776443222222444554444 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0002
      HEAT_2    4 LlqalendpdpevrraairaLg...rignpealpaLvell.ededpavRraaae 53  
                  ++q+l++  ++ +r++a +aL     + n+ +l++L ++l +d++p++R +  e
  KHJ33776.1 1048 FVQYLHDGTSDFIRIKASEALVdlgFMSNDYVLKLLMNILsTDPSPYTRNHLFE 1101
                  578888888888898888888844356788999999999988999999987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1502 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.85u 0.25s 00:00:01.10 Elapsed: 00:00:00.44
# Mc/sec: 10340.61
//
Query:       KHJ33777.1  [L=357]
Description: hypothetical protein EV44_g2987 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2577.85
//
Query:       KHJ33778.1  [L=86]
Description: hypothetical protein EV44_g5474 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.7e-11   44.1  12.8    5.4e-11   43.2  12.8    1.5  1  ANAPC_CDC26  Anaphase-promoting complex APC subunit CDC26
  ------ inclusion threshold ------
      0.079   12.9   0.1       0.13   12.1   0.1    1.5  1  RE_BsaWI     BsaWI restriction endonuclease type 2
      0.088   12.2   1.6        0.1   12.0   1.6    1.0  1  BBS1         Ciliary BBSome complex subunit 1
       0.13   11.9   0.5       0.14   11.8   0.5    1.0  1  CPP1-like    Protein CHAPERONE-LIKE PROTEIN OF POR1-like


Domain annotation for each model (and alignments):
>> ANAPC_CDC26  Anaphase-promoting complex APC subunit CDC26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2  12.8   1.2e-14   5.4e-11       1      64 [.       1      58 [.       1      78 [. 0.60

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 1.2e-14
  ANAPC_CDC26  1 MLRRkPTtItLtseDiaeyederqrqkeqaaqqqrsqasastsqasdtdaddft.sedadpndel 64
                 MLRRkPT+ItLt eDia yed+r r++ + + +++  +++s ++++++d+d    +       ++
   KHJ33778.1  1 MLRRKPTAITLTNEDIAIYEDARAREAAELKCKEELRERQSSQDQMQRDSDSMLtD-------QQ 58
                 **********************5555555554444444444444444432222211.......11 PP

>> RE_BsaWI  BsaWI restriction endonuclease type 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1     3e-05      0.13      21      55 ..      11      43 ..       5      81 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3e-05
    RE_BsaWI 21 lpdvDliiykkdknklkliaiIsaKtSlreRvtqt 55
                l + D+ iy  ++   +  a +++K  lreR +++
  KHJ33778.1 11 LTNEDIAIY--EDARAREAAELKCKEELRERQSSQ 43
                6789*****..********************9943 PP

>> BBS1  Ciliary BBSome complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.6   2.2e-05       0.1     107     169 ..       9      70 ..       4      78 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.2e-05
        BBS1 107 leidpeEeevWkklkeekidleelleeLkklreeevkLssrslklLaleeeeereefiekyks 169
                 +++++e+ ++++++++++ +  + +eeL++ ++++ ++ + s ++L+ ++++ ++++ +++++
  KHJ33778.1   9 ITLTNEDIAIYEDARAREAAELKCKEELRERQSSQDQMQRDSDSMLTDQQNH-QQNLKDAIQE 70 
                 6789999***************************************998888.7776665554 PP

>> CPP1-like  Protein CHAPERONE-LIKE PROTEIN OF POR1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.5   3.2e-05      0.14      41      95 ..      22      75 ..      15      81 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.2e-05
   CPP1-like 41 LreRqegkikvperirfaekkeeesppsasasklkkspawvkklqesldtPssed 95
                 r+R + ++k +e++r  +  +++ ++++ +  +++ ++  ++l+++++ P++++
  KHJ33778.1 22 ARAREAAELKCKEELRERQSSQDQMQRDSDSMLTDQQNH-QQNLKDAIQEPTMRE 75
                589*************66666666666555556666554.489********9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1831  (0.102125); expected 358.6 (0.02)
Passed bias filter:                      551  (0.0307323); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 685.93
//
Query:       KHJ33779.1  [L=509]
Description: putative golgi to endosome transport protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-46  157.3   0.4    3.3e-46  156.4   0.4    1.5  1  ENTH      ENTH domain
    0.00059   18.9   0.0    0.00097   18.2   0.0    1.3  1  ANTH      ANTH domain
  ------ inclusion threshold ------
       0.07   13.0   0.1       0.12   12.2   0.1    1.3  1  VHS       VHS domain


Domain annotation for each model (and alignments):
>> ENTH  ENTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.4   0.4   5.4e-50   3.3e-46       1     124 [.      32     155 ..      32     156 .. 0.98

  Alignments for each domain:
  == domain 1  score: 156.4 bits;  conditional E-value: 5.4e-50
                 --HHHHHHHHHTSSSSSS--HHHHHHHHHHTTSHHHHHHHHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHS-HHHHHHHHHTHHHHHGGGG---B-T CS
        ENTH   1 yseteskvreatnndpwGpsnkllteiarltyskkelseiisvitkrLqnnkgkewrsvlKaLtlieYLlknGseqvidwlkenisiiktlsefkyide 99 
                 y+e+e+kvreatnn+pwG+s++ +++ia+ ty++++l+ei+ +i+kr++++   ewr+++KaL+l+e+L+knGse+vid++++++ ++k+l++f+yid+
  KHJ33779.1  32 YTEMEAKVREATNNEPWGASSSMMQDIANGTYNYQNLNEIMPIIYKRFTEKAADEWRQIYKALQLLEFLIKNGSERVIDDARSHLTLLKMLRQFHYIDQ 130
                 799************************************************************************************************ PP

                 TS-B-HHHHHHHHHHHHHHHT-HHH CS
        ENTH 100 egkdeglniRkkakkiislledeer 124
                 +gkd+gln+R++ak++++ll+d +r
  KHJ33779.1 131 NGKDQGLNVRNRAKELTELLSDVDR 155
                 **********************886 PP

>> ANTH  ANTH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.0   1.6e-07   0.00097       2     127 ..      35     159 ..      34     176 .. 0.82

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 1.6e-07
                 HHHHHHHHT-SSS---HHHHHHHHHHHCSTTS-HHHHHHHHHHHCTSS...SHHHHHHHHHHHHHHHHHS-CHHHHHHHHTT-----TT---TSHHHST CS
        ANTH   2 levavvKAtshdevPpkekhvreilvltssrekvaalvwalsrrlklt..rnwvvalKaLilvHklLreGhpsveqellsarrrisellnlssfddsss 98 
                 +e+ v+ At+ +   +    ++ i  +t + +++++++  + +r +++   +w + +KaL l+  l++ G+++v+ ++ s+ + ++ l +++      +
  KHJ33779.1  35 MEAKVREATNNEPWGASSSMMQDIANGTYNYQNLNEIMPIIYKRFTEKaaDEWRQIYKALQLLEFLIKNGSERVIDDARSHLTLLKMLRQFHY-I--DQ 130
                 5778999*********************999*************98762257***********************999999887776666666.3..46 PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHSS- CS
        ANTH  99 kswdysafiraYakyLderlefhrklkvd 127
                 +++d++ ++r+ ak L+e l+  ++ + +
  KHJ33779.1 131 NGKDQGLNVRNRAKELTELLSDVDRIRAE 159
                 89999999998887777766655555555 PP

>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1     2e-05      0.12      42     118 ..      69     151 ..      32     170 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2e-05
                 HHHHHHHHHHHT-...SSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHCTTTCHCS....HHHHHHHHHHHHH CS
         VHS  42 keavrlikkkins...knphvallaLklldalvkNcGskfhleiaskeflnelvklilekknsklak...vkkkvlelleeWa 118
                  e + +i k+  +   ++   ++ aL+ll+ l+kN+ +++++   s   l ++++ +   +++ + +   v+++++el e ++
  KHJ33779.1  69 NEIMPIIYKRFTEkaaDEWRQIYKALQLLEFLIKNGSERVIDDARSHLTLLKMLRQFHYIDQNGKDQglnVRNRAKELTELLS 151
                 567888889988844233345688*****************998888777777766654443333334568888777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1195  (0.0666518); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.38
# Mc/sec: 3968.05
//
Query:       KHJ33780.1  [L=276]
Description: putative ribosome recycling factor domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-36  124.0   0.8      9e-36  123.3   0.8    1.3  1  RRF       Ribosome recycling factor
  ------ inclusion threshold ------
       0.17   11.7   0.4       0.25   11.2   0.4    1.2  1  GON       GON domain


Domain annotation for each model (and alignments):
>> RRF  Ribosome recycling factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.3   0.8     1e-39     9e-36       1     161 [.     103     273 ..     103     273 .. 0.92

  Alignments for each domain:
  == domain 1  score: 123.3 bits;  conditional E-value: 1e-39
                 HHHHHHHSS-S.SSSCGGGTTSEEE.ETTE.EEE.GGGTEEEEESSTTEEEEEESSCCHHHHHHHHHHH.SCC-SEEEEESS...EEEEE--SSSHHHH CS
         RRF   1 lkkelsklrtg.ranpslldnikVe.yygk.ktp.LnqlAqvsvkeartllitpfdkslvkaiekaIlk.sdlglnpqqdge...vlrvpipplTeErr 91 
                 l++elsklr g  +np+ll+n+++  ++g+ kt+ L +lAq+ +k++r+l i++ +k++vk+i +aI++ + l+++p+qd e    l+v ipp+T+E+r
  KHJ33780.1 103 LQSELSKLRKGgGFNPDLLENLRIVvQKGSkKTEsLGDLAQIIPKGGRSLAIHVGEKAHVKPIISAIQSaAFLNIQPTQDPEepaLLNVLIPPPTKESR 201
                 6899******99*********88842333324546**********************************8889*****9777788************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.CS-H.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         RRF  92 kelvkeakkaaekakvairniRrdankklkklek.kise.Ddvkkaekeiqkltdkyikeidellkakekel 161
                 +   k ++k++e a + +r++R+  +k+l+++e  k+++ Dd+kka+ke++ +++k i +i++ ++ ++k++
  KHJ33780.1 202 DLALKMVHKVGETATTGVRSVRAITQKRLRNIELkKLARpDDLKKAHKEMEIIVEKGIVDIKKCVELARKAI 273
                 *********************************9569999**************************999987 PP

>> GON  GON domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.4   2.8e-05      0.25      49     119 ..      26      96 ..      14     106 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.8e-05
         GON  49 geeeNyaevyekrlkepeecpsngsrkesceclkdeeakaGltkfskirldleslkvitndftFaetikGk 119
                  e++N + ++ k +++ ++ p   ++k + +  kde+++ G  kfsk ++  ++++ +++ ++F++ ++G 
  KHJ33780.1  26 KEKTNASLYFLKSTNNFSNSPILFKKKGKNSSIKDERDEVGEKKFSKSKIATNNINNDDDLWNFTNLKEGI 96 
                 478899999999999999999999999999999***********************99999*****99993 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (276 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       615  (0.034302); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2103.19
//
Query:       KHJ33781.1  [L=205]
Description: hypothetical protein EV44_g3553 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.019   13.0   3.1      0.019   12.9   3.1    1.1  1  Prominin       Prominin
      0.036   13.3   0.1      0.047   12.9   0.1    1.3  1  Zip            ZIP Zinc transporter
       0.13   12.5   4.1      0.094   13.0   2.2    1.7  2  BORCS7         BLOC-1-related complex sub-unit 7
       0.22   11.6   5.6       0.11   12.6   2.9    1.7  2  DUF1664        Protein of unknown function (DUF1664)
        0.3   11.7   4.7       0.45   11.1   1.2    2.3  3  ING            Inhibitor of growth proteins N-terminal histon
       0.94    8.2   5.9          1    8.1   5.9    1.1  1  ALMT           Aluminium activated malate transporter
        1.2    9.4   5.7       0.66   10.3   2.6    2.1  3  BLOC1_2        Biogenesis of lysosome-related organelles comp
          2    6.2   6.4        2.2    6.1   6.4    1.1  1  V_ATPase_I     V-type ATPase 116kDa subunit family
        2.4    6.4   7.9       0.65    8.3   3.8    1.8  2  WDCP           WD repeat and coiled-coil-containing protein f
        3.6    7.3   6.5          2    8.1   4.4    1.7  1  zf-CpG_bind_C  CpG binding protein zinc finger C terminal dom
        6.1    7.5   8.8          9    6.9   5.5    2.6  2  Syntaxin-6_N   Syntaxin 6, N-terminal


Domain annotation for each model (and alignments):
>> Prominin  Prominin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   3.1   1.2e-05     0.019     249     338 ..      47     142 ..       5     183 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.2e-05
    Prominin 249 keakeqLeqvnklekeLrksgsqLrdglrgvkrdlnqalsnlCqseeCskil...ssleiekldtskcl...dqlpnvdevlealeevletnlssi 338
                  ++++ +  +++   ++rk+  q++++l++  ++ln+    +++ +e ++i+   + +e +k++ +++    +++pn +++l+++e+ +++  +++
  KHJ33781.1  47 LNTERRMDRMEEANHDIRKTLIQIQKSLSSLENQLNSQTPPNIKYSESQDIKqppKAEESKKMKGNRETpipSSIPNDKHQLTNVEKSVKETWTET 142
                 4578899999***************************9999999555555551115666677888888899***************9998876654 PP

>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   2.9e-05     0.047     104     202 ..     105     202 ..      65     204 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.9e-05
         Zip 104 sshkektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeqaseeedkeklaslkvraiilllglilHsfidGL 202
                 +s+k k + ++  +ss +++k++  n++ + +e +++    +d+d+ s ++ +n++  k+e + ++a+ ++   kl+++++ +i+l +gl+   f++GL
  KHJ33781.1 105 ESKKMKGNRETPIPSSIPNDKHQLTNVEKSVKETWTETLLDKDMDHHSFTSAKNKVVLKPERRLTRAN-TDVFDKLSEIQLSGIVLSVGLFSSVFPEGL 202
                 44555555555667779999999999999999999999*************************99987.9****************************9 PP

>> BORCS7  BLOC-1-related complex sub-unit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   2.2   5.8e-05     0.094      20      95 ..       3      79 ..       1      86 [. 0.86
   2 ?   -3.7   0.0       8.7   1.4e+04      84      91 ..     129     136 ..     124     144 .. 0.51

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.8e-05
      BORCS7 20 Ltervevivndissvakqv.vkgSksseilmkaaksfaqqedaienteesLkkmsllttelnyqveaisksikqlee 95
                L+++  +i +  ++++k + + +++++  ++k+ + ++ +e++  nte+ +++m+     + ++  +i+ks+++le+
  KHJ33781.1  3 LNDSLADIDTKFENLTKTIeLGHANTNGRTEKIEQWLTRTEKVNLNTERRMDRMEEANHDIRKTLIQIQKSLSSLEN 79
                566667777777888888845689************************************************99874 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 8.7
      BORCS7  84 eaisksik 91 
                  +++ks+k
  KHJ33781.1 129 TNVEKSVK 136
                 23333332 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   2.9   6.6e-05      0.11      39     119 ..       3      83 ..       2      85 .. 0.96
   2 ?   -1.2   0.0       1.2   1.9e+03      49      62 ..     127     140 ..     120     182 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 6.6e-05
     DUF1664  39 lsdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskler 119
                 l+d ++++ ++ e++ ++++    + + r +++++ l  ++++  ++++ +++++e  ++i++ + ++++  ++le++l++
  KHJ33781.1   3 LNDSLADIDTKFENLTKTIELGHANTNGRTEKIEQWLTRTEKVNLNTERRMDRMEEANHDIRKTLIQIQKSLSSLENQLNS 83 
                 67899999*********************************************************************9975 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.2
     DUF1664  49 qleqvseslaatkr 62 
                 ql++v +s+++t  
  KHJ33781.1 127 QLTNVEKSVKETWT 140
                 66666666666543 PP

>> ING  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.2   0.00027      0.45      22      72 ..       6      73 ..       3      81 .. 0.76
   2 ?    9.9   2.1   0.00065       1.1       2      65 ..      35     112 ..      34     131 .. 0.77
   3 ?   -0.8   0.0       1.4   2.3e+03      22      46 ..     127     155 ..     115     183 .. 0.53

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00027
                HHHHHHHHHHHHHHHH..........HHHHHHHH...TS..S-HHHHHHHHH....HHHHHHHHHHHH CS
         ING 22 elreiDakvqellkei..........dskiekfl...kngslqknekeeels....riqeelkeaqel 72
                 l +iD k+++l+k i           +kie++l   ++ +l+ +++ ++++    +i+++l+++q++
  KHJ33781.1  6 SLADIDTKFENLTKTIelghantngrTEKIEQWLtrtEKVNLNTERRMDRMEeanhDIRKTLIQIQKS 73
                68899999999999999999999999999999*97775555555555555555555777777777765 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00065
                 HHHHHTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..............TS..S-HHHHHHHHHHHHHH CS
         ING   2 LedyldsvenLPlelqrnltelreiDakvqellkeidskiekfl..............kngslqknekeeelsriqee 65 
                 +e++l   e++ l ++r+++++ e    ++++l +i+++++++               +++++++++k ee ++++ +
  KHJ33781.1  35 IEQWLTRTEKVNLNTERRMDRMEEANHDIRKTLIQIQKSLSSLEnqlnsqtppnikysESQDIKQPPKAEESKKMKGN 112
                 699*********************************888877776656666777777666666666666666666655 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHHHHH..HHHHHHHH..T CS
         ING  22 elreiDakvqellkei..dskiekfl..k 46 
                 +l +++++v+e++ e   d+ +++ +  +
  KHJ33781.1 127 QLTNVEKSVKETWTETllDKDMDHHSftS 155
                 45555555666555555533333333333 PP

>> ALMT  Aluminium activated malate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.9   0.00063         1     311     426 ..      47     166 ..      10     196 .. 0.61

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00063
        ALMT 311 relaesvkkmkklsk.veellkevkvaaeeLqskldskskLlvnsekweaakkkekaeeveekkeeekeseskkeeaeaveeaeseseksllkesk..r 406
                  + + ++ +m++ ++ + ++l ++++++ +L+++l+s+    ++ ++ + +k+  kaee+++ k ++++   ++  +++++ +++e++ + +++++   
  KHJ33781.1  47 LNTERRMDRMEEANHdIRKTLIQIQKSLSSLENQLNSQTPPNIKYSESQDIKQPPKAEESKKMKGNRETPIPSSIPNDKHQLTNVEKSVKETWTETllD 145
                 445566777777766678888888888888888888888877877777777777777777777776666666666555555444444443333332002 PP

        ALMT 407 slklskkesapaee.sleekq 426
                 + + +++ ++++++  l+++ 
  KHJ33781.1 146 KDMDHHSFTSAKNKvVLKPER 166
                 333333333333221333333 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       1.8     3e+03      66      81 ..       6      21 ..       3      23 .. 0.66
   2 ?   10.3   2.6   0.00041      0.66      14      65 ..      31      82 ..      15      83 .. 0.82
   3 ?   -3.7   0.0       9.3   1.5e+04      65      75 ..     126     136 ..     123     138 .. 0.64

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 1.8
     BLOC1_2 66 qidqiekqvteLeeav 81
                ++ +i+++ + L++++
  KHJ33781.1  6 SLADIDTKFENLTKTI 21
                5667777777777765 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00041
     BLOC1_2 14 eleatvedyklLeklNeaasekykklkdvaaslekkleklnekyeelqpylq 65
                 +e   + +   ek+N +++++ + ++++  +++k+l ++++   +l+++l+
  KHJ33781.1 31 RTEKIEQWLTRTEKVNLNTERRMDRMEEANHDIRKTLIQIQKSLSSLENQLN 82
                55666677788899**********************9999998888877765 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 9.3
     BLOC1_2  65 qqidqiekqvt 75 
                  q+ ++ek+v+
  KHJ33781.1 126 HQLTNVEKSVK 136
                 46666666665 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   6.4    0.0013       2.2      39     135 ..      14     118 ..       6     181 .. 0.68

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0013
  V_ATPase_I  39 lrfleeeieklekavikeeea.......eesleapeekeldeleeelekleeelkelnenleklkkelnelvelkavlekakefleeeeeeeeeeesee 130
                 ++ l+++ie  + ++  ++e+       +e+ + ++e+++d++ee  +++ + l +++++l++l+++ln+ +  +  +++ +++ +  ++ee+++ + +
  KHJ33781.1  14 FENLTKTIELGHANTNGRTEKieqwltrTEKVNLNTERRMDRMEEANHDIRKTLIQIQKSLSSLENQLNSQTPPNIKYSESQDIKQPPKAEESKKMKGN 112
                 4444444443222222222223445555889999999*********************************99999999998888876544444444333 PP

  V_ATPase_I 131 eeee.k 135
                 +e+   
  KHJ33781.1 113 RETPiP 118
                 333332 PP

>> WDCP  WD repeat and coiled-coil-containing protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   3.8    0.0004      0.65     532     613 ..      16      97 ..       3     112 .. 0.80
   2 ?    0.2   0.2      0.12   1.9e+02     443     496 ..     107     160 ..      97     186 .. 0.62

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0004
        WDCP 532 pvnrsaalasasstsdessrpespkvekkknlekekeaeqlskelerlsekltevqqsLseltdllqngkksspvYplsqdp 613
                 + ++++ l +a+++ ++++  +  + ++k nl++e++++++++  + + ++l ++q+sLs l++ l+++   + +Y  sqd 
  KHJ33781.1  16 NLTKTIELGHANTNGRTEKIEQWLTRTEKVNLNTERRMDRMEEANHDIRKTLIQIQKSLSSLENQLNSQTPPNIKYSESQDI 97 
                 444455555555555555555555566788999***********************************999********996 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.12
        WDCP 443 esqssasalssllnkaekkklieslskesqkqkrellltastsiqseksgrkLi 496
                 ++ + + ++    ++++ k+++ ++ k+++++  e ll ++   +s +s ++ +
  KHJ33781.1 107 KKMKGNRETPIPSSIPNDKHQLTNVEKSVKETWTETLLDKDMDHHSFTSAKNKV 160
                 333333344445677888888888888888888888888888877776655433 PP

>> zf-CpG_bind_C  CpG binding protein zinc finger C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   4.4    0.0012         2      11      77 ..      33     102 ..      28     115 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0012
  zf-CpG_bind_C  11 qriqewqsspsvaeeenkkklekirkeqeeakkklkelekklkkLeeliekakklslkeeeeee.ed..e 77 
                    ++i++w ++  +++ +++++++++++ +++++k+l +++k l++Le+ ++++   ++k +e+++ ++  +
     KHJ33781.1  33 EKIEQWLTRTEKVNLNTERRMDRMEEANHDIRKTLIQIQKSLSSLENQLNSQTPPNIKYSESQDiKQppK 102
                    799***********************************************99988888777766333443 PP

>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.1      0.28   4.6e+02      46      70 ..       3      27 ..       2      37 .. 0.79
   2 ?    6.9   5.5    0.0055         9      21      65 ..      35      82 ..      25     150 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.28
  Syntaxin-6_N 46 LrkalrsiewdledLeetvrivekn 70
                  L+ +l +i+++ e+L +t++   +n
    KHJ33781.1  3 LNDSLADIDTKFENLTKTIELGHAN 27
                  6789999************766555 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0055
  Syntaxin-6_N 21 yrrw...erlledtssstseeldetrteLrkalrsiewdledLeetvr 65
                  +++w   ++  +++++++ + ++e+++++rk+l +i++ l+ Le+  +
    KHJ33781.1 35 IEQWltrTEKVNLNTERRMDRMEEANHDIRKTLIQIQKSLSSLENQLN 82
                  4455422222444445689*************************9883 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1779  (0.0992247); expected 358.6 (0.02)
Passed bias filter:                      722  (0.04027); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.45
# Mc/sec: 1370.44
//
Query:       KHJ33782.1  [L=437]
Description: putative cysteine protease atg4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.8e-92  308.3   0.0    6.3e-92  307.9   0.0    1.2  1  Peptidase_C54  Peptidase family C54


Domain annotation for each model (and alignments):
>> Peptidase_C54  Peptidase family C54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  307.9   0.0   3.5e-96   6.3e-92       3     275 ..      99     387 ..      97     388 .. 0.94

  Alignments for each domain:
  == domain 1  score: 307.9 bits;  conditional E-value: 3.5e-96
  Peptidase_C54   3 eflkdfesriwltYRkeFppieks......................gltsDaGWGCmlRsgQmllaqalllhllgrdwrreeksekkeeetyrkil 76 
                    efl+dfe+ri ltYR++Fppi++                        +tsD+GWGCm+RsgQ+lla++lll+ +grdwrr        + + +ki+
     KHJ33782.1  99 EFLDDFETRILLTYRSGFPPIPRIqhpkktsslsiqerlrnqlegaAFTSDTGWGCMIRSGQSLLANTLLLLQFGRDWRRG-----PVSLEEKKII 189
                    799*******************8899******************************************************5.....33456679** PP

  Peptidase_C54  77 slFlDkpsapfSihrlvkigk.slgkkvgeWfgPstvaqilkklvekakeeaglkvyvaqdssvvykddvkklakeskkekeekkwkpvlilvplr 171
                    slF+D+p+apfSih++v++g+ ++gk++geWfgPs++a++++ l+    e ++l+vyv+ ds  vy+d+++++ak      +  + kp+lil+++r
     KHJ33782.1 190 SLFADDPRAPFSIHKFVEHGTaACGKQPGEWFGPSATARCIQVLTT-RCELSNLSVYVTGDSLEVYEDNFMAAAKP-----DGINFKPTLILIGTR 279
                    *********************99***********************.88999*********988******744443.....455559********* PP

  Peptidase_C54 172 lGldkvnpkyvealkellklkqsvGiiGGrpksslYfvgvqedkliyLDPHtvqeav....edeaeseeelssfhckkprklsiskldpslllgfl 263
                    lGl++++p+y+ealk+ l++ qs+Gi+GG+p+ss+Yfv+vq+ +++yLDPH++q+a+    + +++s+ee++s+h++++r+ +i+++dps+l++fl
     KHJ33782.1 280 LGLENITPVYWEALKASLQMSQSIGIAGGHPSSSHYFVAVQDYYFFYLDPHNTQPALnmmdDMNNYSQEEIESCHTRRLRRAHIKEMDPSMLIAFL 375
                    *********************************************************888867899****************************** PP

  Peptidase_C54 264 ckdeedfedlve 275
                    +++e+d+ d+ +
     KHJ33782.1 376 IRSEKDWMDWRK 387
                    *********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3098.33
//
Query:       KHJ33783.1  [L=504]
Description: putative j domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.1e-24   84.2   0.4    1.5e-23   82.7   0.4    1.9  1  DnaJ             DnaJ domain
    1.1e-09   38.3   1.6    1.1e-09   38.3   1.6    3.1  2  zf-C2H2_jaz      Zinc-finger double-stranded RNA-binding
    7.8e-09   35.6   1.0    2.9e-08   33.8   1.0    2.1  1  zf-met           Zinc-finger of C2H2 type
    6.4e-07   29.6   6.7     0.0019   18.5   1.8    2.7  2  zf-C2H2_2        C2H2 type zinc-finger (2 copies)
    8.7e-07   29.3   2.5      0.025   15.4   0.2    3.4  3  zf-C2H2_4        C2H2-type zinc finger
     0.0026   18.1   5.9          1    9.9   0.9    3.0  2  zf-C2H2          Zinc finger, C2H2 type
  ------ inclusion threshold ------
      0.012   16.0   7.0       0.46   10.8   0.1    3.7  4  AAA_assoc        Domain associated at C-terminal with AAA
       0.49   11.1   7.6          5    7.8   0.1    3.3  2  zf-C2H2_3rep     Zinc finger C2H2-type, 3 repeats
        1.4    9.2   3.6        8.7    6.7   0.5    3.1  3  zf-C2H2_8        C2H2-type zinc ribbon
        2.7    8.3   6.0        1.1    9.6   0.3    3.1  4  Phage_int_SAM_1  Phage integrase, N-terminal SAM-like domain


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.7   0.4   8.4e-27   1.5e-23       2      63 .]      31      93 ..      30      93 .. 0.98

  Alignments for each domain:
  == domain 1  score: 82.7 bits;  conditional E-value: 8.4e-27
                HHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHH.HHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  2 yYeiLgvskdasedeIkkaYrklalkyHPDknpkdp.eaeekFkeineAyevLsdpekRkqYD 63
                yYeiLgv++ ase++IkkaYrk+al++HPDkn +d  +a+ +F ei+ Aye+L d+++R++YD
  KHJ33783.1 31 YYEILGVDHLASEADIKKAYRKKALELHPDKNFGDVeNATSRFAEIQSAYEILADSQERAWYD 93
                9*******************************999889************************9 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   1.6   6.3e-13   1.1e-09       3      26 ..     319     342 ..     317     343 .. 0.96
   2 ?    2.9   1.1     0.081   1.4e+02       4      26 ..     479     501 ..     477     502 .. 0.82

  Alignments for each domain:
  == domain 1  score: 38.3 bits;  conditional E-value: 6.3e-13
                  BBTTTTBBBSSHHHHHCCTTSHHH CS
  zf-C2H2_jaz   3 YCvlCdKyFksenaldnHlkSKkH 26 
                  +Cv+C K Fksen++ +H++SKkH
   KHJ33783.1 319 ECVVCRKIFKSENQYLAHERSKKH 342
                  7*********************** PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.081
                  BTTTTBBBSSHHHHHCCTTSHHH CS
  zf-C2H2_jaz   4 CvlCdKyFksenaldnHlkSKkH 26 
                  C  C   F+s n l nH+k+ +H
   KHJ33783.1 479 CRNCGDRFESKNKLFNHIKTSNH 501
                  555666799999999******99 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   1.0   1.6e-11   2.9e-08       2      25 .]     319     342 ..     318     342 .. 0.97

  Alignments for each domain:
  == domain 1  score: 33.8 bits;  conditional E-value: 1.6e-11
      zf-met   2 yCelCnvtfnsesqlksHlqGKkH 25 
                 +C +C + f+se+q+ +H ++KkH
  KHJ33783.1 319 ECVVCRKIFKSENQYLAHERSKKH 342
                 6*********************** PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   1.8   1.1e-06    0.0019      41      85 ..     309     352 ..     274     361 .. 0.78
   2 !   13.0   0.2   5.5e-05     0.098      45      76 ..     472     502 ..     431     504 .] 0.80

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 1.1e-06
   zf-C2H2_2  41 eylrekieekleClyCekefkslealreHmkkkgHckineeeeee 85 
                 e  ++ +e+  eC++C+k fks +++ +H ++k+H k  ++ ++e
  KHJ33783.1 309 ESEESDVEN-IECVVCRKIFKSENQYLAHERSKKHIKAVKQLKSE 352
                 444556666.9*************************987665544 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 5.5e-05
   zf-C2H2_2  45 ekieekleClyCekefkslealreHmkkkgHc 76 
                 e +  +leC  C+++f+s+++l +H+k+ +H 
  KHJ33783.1 472 ESLI-NLECRNCGDRFESKNKLFNHIKTSNHA 502
                 4444.49************************7 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0        10   1.8e+04       9      21 ..     174     187 ..     173     187 .. 0.74
   2 !   12.0   0.1   0.00017       0.3       2      22 ..     319     339 ..     318     341 .. 0.92
   3 !   15.4   0.2   1.4e-05     0.025       2      22 ..     478     498 ..     477     499 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 10
   zf-C2H2_4   9 sFsskka.LlrHlk 21 
                 +F s+++ + +H+k
  KHJ33783.1 174 TFGSSNDiYETHVK 187
                 68888885678986 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 0.00017
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlkt 22 
                 +C +C+k F+s +++l H ++
  KHJ33783.1 319 ECVVCRKIFKSENQYLAHERS 339
                 7*****************987 PP

  == domain 3  score: 15.4 bits;  conditional E-value: 1.4e-05
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlkt 22 
                 +C+ Cg +F sk++L +H+kt
  KHJ33783.1 478 ECRNCGDRFESKNKLFNHIKT 498
                 7******************97 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.4   0.00064       1.2       2      23 .]     319     342 ..     318     342 .. 0.90
   2 !    9.9   0.9   0.00058         1       2      23 .]     478     501 ..     477     501 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00064
                 EETTTTEEESSHHHHHHHHHC..C CS
     zf-C2H2   2 kCpdCgksFkrksnLkrHirt..H 23 
                 +C +C k Fk+  ++ +H r+  H
  KHJ33783.1 319 ECVVCRKIFKSENQYLAHERSkkH 342
                 6*****************997555 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00058
                 EETTTTEEESSHHHHHHHHHC..C CS
     zf-C2H2   2 kCpdCgksFkrksnLkrHirt..H 23 
                 +C  Cg +F +k  L +Hi+t  H
  KHJ33783.1 478 ECRNCGDRFESKNKLFNHIKTsnH 501
                 7******************99666 PP

>> AAA_assoc  Domain associated at C-terminal with AAA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1       1.4   2.4e+03      34      62 ..     196     223 ..     177     246 .. 0.62
   2 ?    6.3   0.6    0.0066        12       6      76 ..     288     363 ..     283     375 .. 0.69
   3 ?   10.8   0.1   0.00026      0.46      21      76 ..     386     443 ..     367     448 .. 0.69
   4 ?   -1.1   0.0       1.4   2.5e+03      21      45 ..     472     498 ..     455     498 .. 0.60

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.4
   AAA_assoc  34 vkrnelYdavkaYLsskisseaarrLkls 62 
                 +++ +++  +  Y ++k+++ ++r +  +
  KHJ33783.1 196 FSTQKAFSCIDFYRREKLNRATRR-ILDK 223
                 455666666666666666665444.3322 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0066
   AAA_assoc   6 rsllssrlsrllarlspyltivieefd.g....vkrnelYdavkaYLsskiss...eaarrLklskskskssslvlsld 76 
                  +++  ++++++++ +++++i  ee d +    v   ++++  + YL+++ s+   +a ++Lk + +++ +++l+  l+
  KHJ33783.1 288 TDHIIPEWTKIQEQSNNEVYIESEESDvEniecVVCRKIFKSENQYLAHERSKkhiKAVKQLKSELHRE-NKNLN--LE 363
                 556667888888833788888887755323556899***********8888875666677788877544.44344..43 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 0.00026
   AAA_assoc  21 spyltivieefdg...vkrnelYdavkaYLsskisseaarrLklskskskssslvlsld 76 
                 +p++   ie +d+    +++  +++   YL + i s++ r+Lk+s++++  ++ + s+d
  KHJ33783.1 386 DPEIDTGIETIDEfleETSDLSFNHNDDYLDQDIPSDSIRELKISNKDK-TADKNESID 443
                 5555555555444321688889***********************7444.433455555 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 1.4
   AAA_assoc  21 spyltivieefdg..vkrnelYdavka 45 
                 ++ + +  +++ +   ++n+l++++k+
  KHJ33783.1 472 ESLINLECRNCGDrfESKNKLFNHIKT 498
                 455555555543344589****99985 PP

>> zf-C2H2_3rep  Zinc finger C2H2-type, 3 repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   1.4     0.018        32      32      73 ..     317     359 ..     295     386 .. 0.67
   2 ?    7.8   0.1    0.0028         5      27      54 ..     471     498 ..     455     504 .] 0.80

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.018
  zf-C2H2_3rep  32 llqcipcgshfgnaeelwlhvls.vhpsdfklskvaqkknlsa 73 
                    ++c+ c+  f ++++ ++h  s  h + +k++k++ +++ ++
    KHJ33783.1 317 NIECVVCRKIFKSENQYLAHERSkKHIKAVKQLKSELHRENKN 359
                   589***************9987625777777766654333222 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0028
  zf-C2H2_3rep  27 veqclllqcipcgshfgnaeelwlhvls 54 
                    e  + l+c  cg  f ++++l+ h+ +
    KHJ33783.1 471 RESLINLECRNCGDRFESKNKLFNHIKT 498
                   56677899*****************975 PP

>> zf-C2H2_8  C2H2-type zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.8   3.3e+03      11      43 ..     172     204 ..     167     228 .. 0.70
   2 ?    1.2   0.1      0.26   4.7e+02      35      70 ..     315     352 ..     283     360 .. 0.78
   3 ?    6.7   0.5    0.0048       8.7      67      95 ..     477     504 .]     470     504 .] 0.87

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.8
   zf-C2H2_8  11 fpnvrelaqhlrvhlsptqslegklfrcstasc 43 
                 +p+ +   + +++h++p + +  +     + sc
  KHJ33783.1 172 YPTFGSSNDIYETHVKPFYQIWVNFSTQKAFSC 204
                 566777778888999998665444444444444 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.26
   zf-C2H2_8  35 lfrcstascaetfpsmqelvah..tklhykpnryfkce 70 
                 + +  ++ c + f s ++ +ah  +k h k  + +k e
  KHJ33783.1 315 VENIECVVCRKIFKSENQYLAHerSKKHIKAVKQLKSE 352
                 45556678999999999999985567888888877766 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0048
   zf-C2H2_8  67 fkcencllrfrthrslfkhlhvcsdqshs 95 
                 + c nc  rf ++  lf+h++  s+++hs
  KHJ33783.1 477 LECRNCGDRFESKNKLFNHIKT-SNHAHS 504
                 57*****************985.677775 PP

>> Phage_int_SAM_1  Phage integrase, N-terminal SAM-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.8     5e+03      25      57 ..      98     131 ..      93     141 .. 0.50
   2 ?   -3.5   0.0       7.6   1.4e+04      43      66 ..     195     218 ..     191     220 .. 0.72
   3 ?    9.6   0.3   0.00059       1.1      19      66 ..     233     281 ..     223     287 .. 0.87
   4 ?   -0.7   0.1      0.97   1.7e+03      55      72 ..     457     474 ..     440     476 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.8
                      HHHHHHHHHHH..TS--TTT--HHHHHHHHHS-- CS
  Phage_int_SAM_1  25 dLrrflkflae.rgkesleqlttedvraflaele 57 
                       L r  +  +e ++++ ++  +++dv a  ++ +
       KHJ33783.1  98 SLLRERNLNTEgQKQKIFQFTSANDVIALTNRFH 131
                      4444444444444444444455555544444433 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 7.6
                      T--HHHHHHHHHS----------H CS
  Phage_int_SAM_1  43 qlttedvraflaeleeeglsatsl 66 
                      + +t+   ++++ +++e+l+++++
       KHJ33783.1 195 NFSTQKAFSCIDFYRREKLNRATR 218
                      566777777888888888888886 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.00059
                      HHHHHHHHHHHHHHHHH.TS--TTT--HHHHH.HHHHS----------H CS
  Phage_int_SAM_1  19 lraYrrdLrrflkflaergkesleqlttedvr.aflaeleeeglsatsl 66 
                      +r+Y++++r+f  f ++r  + ++  +te++r +fl+++++++ +++ +
       KHJ33783.1 233 IREYNNAIRAFAIFIRKRDPRYIQLPQTEECRqEFLRRTAAAQAAQSRI 281
                      89*****************************65********98666655 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.97
                      S----------HHHHHHH CS
  Phage_int_SAM_1  55 eleeeglsatslarrlsa 72 
                      +l++++++a+s+a+r s 
       KHJ33783.1 457 KLKRAKKNAKSIAARESL 474
                      7888899*****998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (504 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1776  (0.0990574); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3565.74
//
Query:       KHJ33784.1  [L=714]
Description: putative r3h and g-patch domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.1e-10   39.9   0.0    8.8e-10   38.4   0.0    1.8  1  R3H        R3H domain
    5.6e-09   35.7   1.0    5.6e-09   35.7   1.0    2.0  2  G-patch    G-patch domain
  ------ inclusion threshold ------
      0.071   13.2   3.3      0.088   12.9   0.1    3.0  3  G-patch_2  G-patch domain


Domain annotation for each model (and alignments):
>> R3H  R3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   0.0   1.5e-13   8.8e-10       6      60 .]     550     604 ..     547     604 .. 0.93

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 1.5e-13
                 HHHHHHHHHH-S--EEE-----SHHHHHHHHHHHHSSEEEEEE--SS-SEEEEEE CS
         R3H   6 vekklaefvkdtgrslefppmssyeRriiHelaeaygleseSvGeepkRrvvvtk 60 
                 + +++  f+kd   +l++ppm +  R+++He+a+  +l+s+S G +  R  v+++
  KHJ33784.1 550 LKREVKAFLKDGTSTLVLPPMKKSNRQVVHEMANMLKLKSKSNGIGASRFPVLYR 604
                 6678999**99778**************************************986 PP

>> G-patch  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.5       1.2     7e+03      18      22 ..     451     455 ..     442     458 .. 0.59
   2 !   35.7   1.0   9.4e-13   5.6e-09       2      42 ..     672     713 ..     671     714 .] 0.97

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.2
     G-patch  18 qGLGk 22 
                 +GLGk
  KHJ33784.1 451 RGLGK 455
                 45554 PP

  == domain 2  score: 35.7 bits;  conditional E-value: 9.4e-13
     G-patch   2 sniGvkmLqkmGWkpGqGLG.kkeqGiaePieakikkdraGl 42 
                 +n+G  mL+kmGW+ G+ LG  +++Gi +P++ ++kk ++Gl
  KHJ33784.1 672 NNKGRTMLEKMGWSSGTALGaLNNKGILQPLSQTVKKSKRGL 713
                 79*************************************998 PP

>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.4       1.2   7.4e+03      45      56 ..     443     454 ..     437     460 .. 0.58
   2 ?   -2.3   0.0      0.82   4.9e+03       6      15 ..     497     506 ..     494     529 .. 0.61
   3 ?   12.9   0.1   1.5e-05     0.088      11      47 ..     668     705 ..     665     713 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.2
   G-patch_2  45 epkrRpgrlGLG 56 
                 + ++++++ GLG
  KHJ33784.1 443 KRDKKKKKRGLG 454
                 445555566666 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.82
   G-patch_2   6 leeyeevPVe 15 
                 ++ey +++V 
  KHJ33784.1 497 MDEYMKMAVQ 506
                 5566666554 PP

  == domain 3  score: 12.9 bits;  conditional E-value: 1.5e-05
   G-patch_2  11 evPVeeFGaAlLrGMGWkegqgigknkkgr.vkpeepk 47 
                 e++V + G  +L  MGW+ g++ g  +++   +p  ++
  KHJ33784.1 668 EISVNNKGRTMLEKMGWSSGTALGALNNKGiLQPLSQT 705
                 6899999***************9986665434444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (714 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1239  (0.0691059); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.42
# Mc/sec: 5109.81
//
Query:       KHJ33785.1  [L=1330]
Description: putative cap-gly domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-94  316.7   8.5    1.2e-94  316.7   8.5    3.0  3  Dynactin      Dynein associated protein
      6e-20   71.0   0.1      1e-19   70.3   0.1    1.4  1  CAP_GLY       CAP-Gly domain
  ------ inclusion threshold ------
      0.049   13.4   0.1      0.097   12.4   0.1    1.5  1  DUF2158       Uncharacterized small protein (DUF2158)
       0.11   12.4   4.8        1.4    8.8   1.2    3.2  3  DrsE_2        DsrE/DsrF/DrsH-like family
       0.12   12.5   0.1       0.12   12.5   0.1    3.9  3  F_actin_bind  F-actin binding
       0.15   12.3   0.6       0.64   10.3   0.0    2.3  2  Tom37         Outer mitochondrial membrane transport complex 
       0.61   10.1   5.3        1.9    8.6   3.9    2.8  1  Prp19         Prp19/Pso4-like


Domain annotation for each model (and alignments):
>> Dynactin  Dynein associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -9.7   8.4         7   1.8e+04       6      68 ..     355     414 ..     353     428 .. 0.80
   2 ?   -4.8   6.5       4.5   1.2e+04     163     267 ..     443     551 ..     436     582 .. 0.62
   3 !  316.7   8.5   4.9e-98   1.2e-94       1     286 []     622     902 ..     622     902 .. 0.97

  Alignments for each domain:
  == domain 1  score: -9.7 bits;  conditional E-value: 7
    Dynactin   6 edlrasqqiteseaedlssqseammdlnlklqssasKaqakaIdlELrkleaeqasehleilq 68 
                 ++l+++ q +++e+  l +q +   + + kl  +++        +E+  l+ e a+e  e l+
  KHJ33785.1 355 KKLQNKYQLQQQESLGLRKQLK---ETEEKLEQAENSQVDNDLVIEMATLDREVAEETAEALK 414
                 6788888888888888888888...88888888888888888888888888888888777766 PP

  == domain 2  score: -4.8 bits;  conditional E-value: 4.5
    Dynactin 163 pElepvEraldslidllrrdeldekecleeLersialfehLaevhla...eeledlaeelldrvkllqsaldsiaaalgllkallqskl..edveee.d 255
                 +E++p E+a  +++++ r++e   +e l  L  + ++ e+ +   ++   ++  ++ + + +r ++++ +l+ +++a++ lk+ l +++  ed+ ee +
  KHJ33785.1 443 EEMSPEEKASQGWLQMERNNER-LREALICLRDMTQQTEAELRDEIKslrDD-LKEFKTVKERYEVTKEKLNLANVAIEDLKQQLDNAMgaEDMIEElT 539
                 6899999999999998888763.33334445666666655555455533233.4555567777777888888888888888888877776544444444 PP

    Dynactin 256 eeasdllellqe 267
                 e +  l e+++e
  KHJ33785.1 540 EKNVGLQEKVDE 551
                 433333333333 PP

  == domain 3  score: 316.7 bits;  conditional E-value: 4.9e-98
    Dynactin   1 LqsdledlrasqqiteseaedlssqseammdlnlklqssasKaqakaIdlELrkleaeqasehleilqaflPdsFlergdrdsvlalLlfkRlafKaeL 99 
                 Lq+dl+d+ras+++te+eae+ls++s+a++dln+kl +sa+K+q+ aIdlELr l++++a ehl+i+q+flP+sF  ++dr+svlalL+fkR+ fKa L
  KHJ33785.1 622 LQNDLDDIRASHAMTEAEAEELSNRSRAILDLNRKLHISATKTQVEAIDLELRGLDSQEALEHLKIIQLFLPESF--NEDRNSVLALLRFKRVGFKALL 718
                 9**************************************************************************..66******************** PP

    Dynactin 100 lasvvrekfelsslslkgsveeqlvfacellekLtwlsalldrfaaalsscsvetflkigsaypElepvEraldslidllrrdeldekecleeLersia 198
                 l+ + +ek+  +     +++ee++++ac++l +Ltw++ ++drf++a+s+ ++ +flk+++++ ElepvEr+l+++id lrr+el+e++c+ eL+rsia
  KHJ33785.1 719 LHRFFKEKITTQ---PLSGQEENIFAACDALNSLTWVAVTCDRFTNAISRSTISEFLKYEGTLFELEPVERTLNGWIDSLRRNELNESQCAMELQRSIA 814
                 ********9999...66789******************************************************************************* PP

    Dynactin 199 lfehLaevhlaeeledlaeelldrvkllqsaldsiaaalgllkallqskledveeedeeasdllellqelitqarsakvvakkikrrL 286
                 l++hLaev+++++le +a++++ ++ l+qs+l+++a +++++k++++  ++d+  e+e+a +++++ + +i+q+r+akv+++k++r L
  KHJ33785.1 815 LMSHLAEVYITSNLEGYADKVYTKSVLMQSQLENLAISMSFIKQMVEVIVSDEGGENEQALNFSSKSDLIISQTRNAKVIVSKTVREL 902
                 ************************************************996666666699**************************87 PP

>> CAP_GLY  CAP-Gly domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.3   0.1     4e-23     1e-19       1      63 [.       6      69 ..       6      71 .. 0.92

  Alignments for each domain:
  == domain 1  score: 70.3 bits;  conditional E-value: 4e-23
     CAP_GLY  1 vgdrvk.lkegrrGvvryvGpvpfakgewvGveldepnGkndGsvkgkrYFeckpnrGvFvrpe 63
                +g+ v+ +++g +G+v+++G++ fa+g wvGvel +  GkndGsv+++rYFec+ ++G+F+r +
  KHJ33785.1  6 IGQVVRlNDNGIEGTVKFFGETAFAPGLWVGVELTSADGKNDGSVQNRRYFECEMGKGMFLRSA 69
                5788875778889***********************************************9975 PP

>> DUF2158  Uncharacterized small protein (DUF2158)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   3.8e-05     0.097       1      33 [.       5      37 ..       5      50 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.8e-05
     DUF2158  1 stGdVVkLKsGGpeMTVtaaGgviaapgeslkC 33
                s+G VV+L   G e TV+++G++++apg ++ +
  KHJ33785.1  5 SIGQVVRLNDNGIEGTVKFFGETAFAPGLWVGV 37
                69**************************99865 PP

>> DrsE_2  DsrE/DsrF/DrsH-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1         1   2.7e+03     123     151 ..     515     544 ..     490     545 .. 0.83
   2 ?    2.8   0.0     0.039     1e+02     108     142 ..     957     993 ..     951    1003 .. 0.80
   3 ?    8.8   1.2   0.00055       1.4      54     113 ..    1040    1100 ..    1031    1103 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1
                 T--GGGB-TT-.EEE-HHHHHHHHHC-SEE CS
      DrsE_2 123 glkkeelidgv.eiagaatylkeaeeadvn 151
                 ++  e+l +++ +++ga+++++e++e +v 
  KHJ33785.1 515 NVAIEDLKQQLdNAMGAEDMIEELTEKNVG 544
                 566688888888899999999999888875 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.039
                 TT-EEEEEHHHHHHHT--GGGB-TT-..EEE-HHHHH CS
      DrsE_2 108 agvklvaCqmtmdlmglkkeelidgv..eiagaatyl 142
                 ++v+ ++ q tmd++g  + e++ g   ++ + +++l
  KHJ33785.1 957 NEVETISRQCTMDIFGQGESEFFTGYlnKVRTLTSFL 993
                 78999999**************998655566666666 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.00055
                  -TT--HHHHHHHHHS-SS.--SSS-GGGHHHHHHHHHHHHCT---HHHHHHHHHHTT-EEE CS
      DrsE_2   54 vkkkslekmamkmvtrks.klskmnmagigtkmmkkvmkekgvasleeLleaakeagvklv 113 
                  +k++  e++ m ++  +  +    +++ ++++m    mk+k+ a+le+ +e ak+++++l+
  KHJ33785.1 1040 LKEENHERARMIALKDQIqEENMIKIELLESRMRDARMKNKQLAELESCIEGAKKREIELT 1100
                  555555555555544433333344556778999999**********************996 PP

>> F_actin_bind  F-actin binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.5      0.61   1.6e+03      20      89 ..     439     507 ..     427     529 .. 0.67
   2 ?   12.5   0.1   4.7e-05      0.12      62      92 ..     613     642 ..     604     658 .. 0.76
   3 ?   -2.9   0.1       2.9   7.4e+03      16      43 ..    1034    1058 ..    1032    1060 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.61
  F_actin_bind  20 snlkesvsssq.esaqllqlldkvenlhssCsgyvdsipphakFaFrellsrLesqsreLrsavgsknsse 89 
                   ++l e++s+++  s+ +lq+  + e l+++     d  ++    ++r+++ +L   ++e ++   ++ ++ 
    KHJ33785.1 439 AELGEEMSPEEkASQGWLQMERNNERLREALICLRDMTQQTEA-ELRDEIKSLRDDLKEFKTV-KERYEVT 507
                   5555555554437888999888888888887777777666333.6999999999999988855.3343333 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 4.7e-05
  F_actin_bind  62 FaFrellsrLesqsreLrsavgsknssenek 92 
                   F+Frel+++L++ ++++r++++  +++e+e+
    KHJ33785.1 613 FRFRELVTNLQNDLDDIRASHA-MTEAEAEE 642
                   ******************7754.34444443 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 2.9
  F_actin_bind   16 eaalsnlkesvsssqesaqllqlldkve 43  
                    e+++++lke+  +++  a +++l d+++
    KHJ33785.1 1034 ENEIRRLKEE--NHE-RARMIALKDQIQ 1058
                    6899999999..666.888999999987 PP

>> Tom37  Outer mitochondrial membrane transport complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2       2.2   5.5e+03      31      76 ..     336     385 ..     310     394 .. 0.62
   2 ?   10.3   0.0   0.00025      0.64      27     116 ..    1105    1190 ..    1088    1192 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.2
       Tom37  31 eLPaLkdgegtwisgfdnIveylrkks.....eesdldaslsakekadatA 76 
                 +L  L   + ++ ++f+ I++ l++k+     e+  l ++l+++e+ +++A
  KHJ33785.1 336 KLKTLEKAQ-EERDKFECILKKLQNKYqlqqqESLGLRKQLKETEEKLEQA 385
                 455555544.56678888888888776555443333334555555555544 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00025
       Tom37   27 sptgeLPaLkdgegtwisgfdnIveylrkkseesdldaslsakekadatAlisllesklaplllyslyvnsenye.kvTrpayskllpfPl 116 
                  s+++eL +L  ++    +++++I e +++  +  d d  l+++++  ++  + +l +++++l +   y+++en++ ++T   y + l  Pl
  KHJ33785.1 1105 SQNEELSVLEADR----EKWKKIAENVKSL-GVGDQDILLDQEQAIATAREMDYLLNEINDLQAAVRYLSKENFKaRFTDCEYKNWLEQPL 1190
                  8888999999888....7899999999988.66666778888888888888***********************72588888888777765 PP

>> Prp19  Prp19/Pso4-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   3.9   0.00072       1.9       8      40 ..     353     385 ..     350     413 .. 0.92

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00072
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Prp19   8 lLstlqnEWDalmletfelrkqleqtrqeLsqa 40 
                 +L++lqn +   + e+  lrkql++t+++L qa
  KHJ33785.1 353 ILKKLQNKYQLQQQESLGLRKQLKETEEKLEQA 385
                 79****************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2476  (0.1381); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.14u 0.28s 00:00:01.42 Elapsed: 00:00:00.47
# Mc/sec: 8590.33
//
Query:       KHJ33786.1  [L=1169]
Description: putative histone deacetylation protein rxt3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-39  134.2   0.0    4.3e-39  134.2   0.0    3.6  4  Rxt3      Histone deacetylation protein Rxt3
    0.00033   20.7   0.0      0.011   15.8   0.0    2.9  3  LCCL      LCCL domain


Domain annotation for each model (and alignments):
>> Rxt3  Histone deacetylation protein Rxt3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.5       1.5   1.3e+04      81      90 ..      12      21 ..       2      37 .. 0.40
   2 ?   -1.7   1.7      0.53   4.7e+03      61      79 ..     393     411 ..     349     435 .. 0.52
   3 ?   -3.6   0.2         2   1.8e+04      61      78 ..     727     744 ..     708     762 .. 0.42
   4 !  134.2   0.0   4.8e-43   4.3e-39       1     127 []     832     956 ..     832     956 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.5
        Rxt3 81 ekklekkkkr 90
                ++++++++++
  KHJ33786.1 12 QQQQQQQQQQ 21
                1111111111 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.53
        Rxt3  61 akkkakkkskeekskdese 79 
                 +++k++++++e++ +d+++
  KHJ33786.1 393 QREKQEQREREHTVNDSHS 411
                 2222222222222222222 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 2
        Rxt3  61 akkkakkkskeekskdes 78 
                 a+++++++++++++++ s
  KHJ33786.1 727 AHHHHHHHHHHHHHHHLS 744
                 222222222222222222 PP

  == domain 4  score: 134.2 bits;  conditional E-value: 4.8e-43
        Rxt3   1 tvkvprerlkeskreeivarrelWGtdvYtdDSDvvaaliHsGfirgewaedvdvslldlakkkakkkskeekskdeseaekklekkkkrtpvnvpekk 99 
                 tvk+pr +l++  reei++r+++WGtd+YtdDSDv+aa+iH+G++ g+w++++dvsll l+ k +++ +  +   de + ++ le++++++p ++p+ +
  KHJ33786.1 832 TVKIPRIYLEDTIREEITSRKAIWGTDIYTDDSDVLAACIHAGWFLGAWPHHIDVSLLGLELKIDDNGE--SLPPDEIKVNELLENPSEKGPGKIPPGY 928
                 8*********************************************************99887777666..77889999******************** PP

        Rxt3 100 DlhvtlliLpkLekYastvrygikSRew 127
                 D+hvt+liLp Le+Y+st+r+gi+SRew
  KHJ33786.1 929 DCHVTILILPLLERYTSTTRFGIRSREW 956
                 **************************** PP

>> LCCL  LCCL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.2e-06     0.011      33      58 ..     851     876 ..     831     894 .. 0.88
   2 ?    0.8   0.0     0.061   5.5e+02      66      89 ..     933     956 ..     929     962 .. 0.81
   3 ?   -3.3   0.0       1.1   9.9e+03      79      92 ..    1070    1083 ..    1060    1085 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.2e-06
                 S--EESSSSEETTSBHHHHHHHHTSS CS
        LCCL  33 kasvvGskvYssdSsICkAAihaGvi 58 
                 ++ ++G+++Y++dS + +A ihaG+ 
  KHJ33786.1 851 RKAIWGTDIYTDDSDVLAACIHAGWF 876
                 5789********************86 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.061
                 EEEEE--B-S---EE-SS-EEE-- CS
        LCCL  66 vvtiveelkeykgskqngieSesl 89 
                 ++ i   l++y++++++gi+S ++
  KHJ33786.1 933 TILILPLLERYTSTTRFGIRSREW 956
                 5666777899***********876 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 1.1
                  EE-SS-EEE--S-B CS
        LCCL   79 skqngieSeslskk 92  
                  +++n+i+S+sl+++
  KHJ33786.1 1070 VSKNDIQSQSLTQT 1083
                  5699****998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1407  (0.0784762); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.85u 0.25s 00:00:01.10 Elapsed: 00:00:00.41
# Mc/sec: 8625.83
//
Query:       KHJ33787.1  [L=358]
Description: hypothetical protein EV44_g3595 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      1e-06   28.5   0.2    2.1e-06   27.5   0.2    1.5  1  gag_pre-integrs  GAG-pre-integrase domain
    9.6e-06   25.8   0.1    1.7e-05   25.0   0.1    1.4  1  rve              Integrase core domain
     0.0076   16.3   0.1       0.02   15.0   0.1    1.7  1  Integrase_H2C2   Integrase zinc binding domain
  ------ inclusion threshold ------
      0.089   13.1   0.0       0.86   10.0   0.0    2.2  2  Mur_ligase       Mur ligase family, catalytic domain
       0.26   11.0   0.0       0.41   10.4   0.0    1.2  1  DUF5349          Family of unknown function (DUF5349)


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.2   5.8e-10   2.1e-06      20      64 ..     105     152 ..      87     153 .. 0.74

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 5.8e-10
  gag_pre-integrs  20 nkssinlWHrRLGHpsfsrlkkLfk.kgl.lpglkisk.sevCeaCql 64 
                      +++++++ HrR+GHps +rl k+ + +g+ + +  i++  ++C++Cq+
       KHJ33787.1 105 TDTELRRLHRRFGHPSADRLAKILSrSGHdFNRQAIKNlTKFCDSCQK 152
                      6889999***************99842223222223334789****96 PP

>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.1   4.7e-09   1.7e-05       5     117 ..     171     276 ..     167     278 .. 0.91

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 4.7e-09
         rve   5 gelwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpq 103
                 ++ + +Dv +++      ++ +l vvd ++ +  a  l+++++++++  l ++ ++ + g  p++++ D g+ +t k+f++ +  + i+ ++++    +
  KHJ33787.1 171 NSCVYIDVLYID------EKQVLQVVDEATCVQAARWLKSMNAQEAWNSLRNCWIDVYLGP-PDVIVHDAGTNFTGKEFKQSAIAMSITTKVAPTEAHH 262
                 677888999988......467**************99999988888888888999999998.************************************* PP

         rve 104 dnGkvErfhrtlkd 117
                 + G+ Er h  l++
  KHJ33787.1 263 SIGLFERYHTPLRR 276
                 *********99987 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   5.6e-06      0.02      10      55 ..     109     153 ..     104     156 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 5.6e-06
  Integrase_H2C2  10 lkeaHdsagHlGiektlerlrrryyWpgmrkdvkkyvksCetCqrr 55 
                     l+++H   gH+++++  + l+r  +  + r+ +k+  k C++Cq++
      KHJ33787.1 109 LRRLHRRFGHPSADRLAKILSRSGHDFN-RQAIKNLTKFCDSCQKY 153
                     899*************999999999888.***************97 PP

>> Mur_ligase  Mur ligase family, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.25     9e+02      27      37 ..     131     141 ..     128     142 .. 0.87
   2 ?   10.0   0.0   0.00024      0.86      16      50 ..     227     261 ..     223     285 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.25
                 EEEESSHCHHH CS
  Mur_ligase  27 dGsdfieslia 37 
                 +G+df++++i+
  KHJ33787.1 131 SGHDFNRQAIK 141
                 8*******998 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00024
                 HHHHHHTTSEEEEEESSHCHHHTT-EEEES-HGGG CS
  Mur_ligase  16 alflalkGykvdGsdfieslialGaaavvghdaan 50 
                 ++++++ G++++G +f++s+ia  ++  v+  +a+
  KHJ33787.1 227 DVIVHDAGTNFTGKEFKQSAIAMSITTKVAPTEAH 261
                 799*******************9999888887774 PP

>> DUF5349  Family of unknown function (DUF5349)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00011      0.41       5      28 ..      31      54 ..      30      63 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00011
     DUF5349  5 IiSipFLsQnEDmdkYLleYrslk 28
                I  +pFLs + Dmdk  + Y++l 
  KHJ33787.1 31 ISVTPFLSCLADMDKMKVHYNNLT 54
                5669*****************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.34
# Mc/sec: 3166.67
//
Query:       KHJ33788.1  [L=223]
Description: hypothetical protein EV44_g4070 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       387  (0.0215851); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1899.52
//
Query:       KHJ33789.1  [L=99]
Description: hypothetical protein EV44_g4286 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       651  (0.0363099); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.22s 00:00:00.56 Elapsed: 00:00:00.35
# Mc/sec: 854.19
//
Query:       KHJ33790.1  [L=491]
Description: putative mevalonate kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-16   59.8   0.1    5.3e-16   58.6   0.1    1.7  1  GHMP_kinases_N   GHMP kinases N terminal domain
    3.1e-08   33.9   0.1    9.4e-08   32.3   0.1    1.7  1  GHMP_kinases_C   GHMP kinases C terminal
  ------ inclusion threshold ------
      0.048   13.2   0.0       0.14   11.7   0.0    1.8  2  GalKase_gal_bdg  Galactokinase galactose-binding signature


Domain annotation for each model (and alignments):
>> GHMP_kinases_N  GHMP kinases N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.6   0.1   8.8e-20   5.3e-16       3      65 ..     181     258 ..     179     259 .. 0.80

  Alignments for each domain:
  == domain 1  score: 58.6 bits;  conditional E-value: 8.8e-20
                     EEEESSHTTSSSCHHHHHHHHHHHHHHHHTTEH.H....HH.............HHHHHHHHHHHHHHHHHSHHHHHHHHS CS
  GHMP_kinases_N   3 vikseiPvgaGLGSSAAlavalvaAllallgls.l....ee.............aklaleaerlaqggngsggDvaasvyG 65 
                      ++s+iP+gaGLGSSA+++v+l+aAl  ll+++ l    e+             +++a+++e +++ gn+sg+D++++  G
      KHJ33790.1 181 ILRSTIPIGAGLGSSASITVCLAAAL--LLQVRaLsgphEDqpieeahtqisriNMWAYVGEICIH-GNPSGVDNTVASQG 258
                     579**********************9..44433333333224555588899999************.*********99887 PP

>> GHMP_kinases_C  GHMP kinases C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.1   1.6e-11   9.4e-08      11      69 ..     346     402 ..     341     417 .. 0.87

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 1.6e-11
  GHMP_kinases_C  11 ellgellnlsqrselkavvgilppeleellealselGalgaklsGaGgGptvfalfkdk 69 
                     +++g+l+ l++   l+  +g+++p+le+l e++   G    kl+GaGgG++ ++l k++
      KHJ33790.1 346 SEVGKLMALNHG--LLVALGVSHPRLERLRELIDYEGLGWTKLTGAGGGGCAITLLKTD 402
                     689*********..8****************************************9443 PP

>> GalKase_gal_bdg  Galactokinase galactose-binding signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.3e-05      0.14       9      48 ..      39      81 ..      31      81 .. 0.83
   2 ?   -3.3   0.0       1.2   7.1e+03      37      47 ..     352     362 ..     352     363 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.3e-05
                     --..-.EEEEEEEEEEEE--S-TTTT-EEEEEEEEEEEEEEEE CS
  GalKase_gal_bdg  9 ke..p.fvasAPGRvnLiGEHtDYngGfVlpmAieqdiyiavs 48
                     +   p f++sAPG v   GEH    g + ++++i ++ y+ vs
       KHJ33790.1 39 TPlmPsFMVSAPGKVIAFGEHAVVYGKSAIAASISLRSYLLVS 81
                     5544469*************************99999998875 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.2
                      EEEEEEEEEEE CS
  GalKase_gal_bdg  37 mAieqdiyiav 47 
                      mA++++ ++a 
       KHJ33790.1 352 MALNHGLLVAL 362
                      9*****99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3516.37
//
Query:       KHJ33791.1  [L=405]
Description: putative wsc domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-63  214.6   0.0    2.5e-63  214.2   0.0    1.2  1  DUF1996   Domain of unknown function (DUF1996)


Domain annotation for each model (and alignments):
>> DUF1996  Domain of unknown function (DUF1996)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  214.2   0.0   1.4e-67   2.5e-63       1     233 []      40     296 ..      40     296 .. 0.88

  Alignments for each domain:
  == domain 1  score: 214.2 bits;  conditional E-value: 1.4e-67
     DUF1996   1 DPivspgevsshvHtivGgsafnasltyeelrkskctscevkeDkSnYWvptLYfk.kengsferveqkggllvYYllekkkekkvtafpkgfrmiaGd 98 
                 DPiv pg++s+h+H + Gg++f +s+t +++ +s+ct+  vk+D+SnYW+p+LYf+ + ++++e+ve +  ++vYY+++++ ++ ++afp+g+r+ +G+
  KHJ33791.1  40 DPIVYPGSPSAHMHLVQGGNGFAVSMTDNQALESTCTTSLVKNDRSNYWTPALYFQdPLTDQIEAVELS-YMQVYYFFDAT-TDVIKAFPPGLRIAVGN 136
                 9*****************************9************************9778889****966.999*****655.6669************* PP

     DUF1996  99 ptlr.........ekslaqka.........isftclesee..................keeaeeetkelpkktkkkc...asglraeilfpsCwdgknl 158
                 p lr         +      +         +++tc +s+e                  ++e++ +  ++p   +k+c   a  lra+i+fpsC++    
  KHJ33791.1 137 PDLRtppdsggriN------TnlangplqpVQWTCPRSDEslplypvdsdglngvgiqDPENRAAGVGFP---DKNCdslAAPLRADIHFPSCYNPAV- 225
                 ****6666665553......033344455599******99****************87666678899***...566855567************9875. PP

     DUF1996 159 dspdhkshvaypskveesegkCpeshpvrlpqlfyeviwdtekfnkk.edgk.sqpfvlsngdktGyglHaDFinGW 233
                   +d k+++++p+     +g+Cp+++ +++p++f+ev+w+t kf+++ ++g+ +qpf+lsngd+tGy+lH+DFi GW
  KHJ33791.1 226 RLDDYKNNMQFPT-----NGNCPQGW-THVPHMFFEVYWNTPKFANRwTQGEgRQPFILSNGDSTGYSLHGDFIAGW 296
                 56789******85.....89******.******************999555569*********************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2936.47
//
Query:       KHJ33792.1  [L=169]
Description: putative nuclear transport factor 2 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-05   25.3   0.0    1.8e-05   24.7   0.0    1.3  1  Mtr2      Nuclear pore RNA shuttling protein Mtr2
  ------ inclusion threshold ------
       0.11   13.1   0.1       0.23   12.1   0.1    1.6  1  NTF2      Nuclear transport factor 2 (NTF2) domain


Domain annotation for each model (and alignments):
>> Mtr2  Nuclear pore RNA shuttling protein Mtr2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   2.1e-09   1.8e-05      10      81 ..      20      92 ..      11     119 .. 0.78

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 2.1e-09
                HHHHHHHHHH---HCCHHHHHCCB....-SSS-EEEETTEEESSHHHHHHHHHHHS--EEEEEEEEEEEEETTTSE CS
        Mtr2 10 fvkkvlahLDeqdvnkleqflqlF....lkpqckivfngkPlaqaaaFlkiwlqsvvltqHaltalDfHvipgtgt 81
                f+   + +L+   ++k +++l  F    ++++  i++ng+ + +++ F+k ++++v   q+++++ D H++++   
  KHJ33792.1 20 FIETYYPALN---SSKGRSALASFyiksENTKPDIIINGNTISSPTDFQKLFETQVQRAQYEVQSYDAHILNSNYN 92
                5555555565...444555555555554778889*************************************96554 PP

>> NTF2  Nuclear transport factor 2 (NTF2) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   2.5e-05      0.23       2     106 ..      17     142 ..      16     166 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.5e-05
                 HHHHHHHHHHHHHH.HGGGGGGGGEE.EEEEE..EEETTEEEEESHHHHHHHHHHSSCSCEEEEEEEEEEEE................TSEGGGCEEEE CS
        NTF2   2 akafvqqYYaalda.gdregllalya.adasl..ltpegsspvkgreaIteffrslpftrielkittvdaqp................deaslstgvlv 80 
                 a+ f++ YY al++ + r++l+ +y   +++   +  +g+ +++++ + ++ f++  +   + ++++ da+                 d++    +v+v
  KHJ33792.1  17 AQDFIETYYPALNSsKGRSALASFYIkSENTKpdIIINGN-TISSPTDFQKLFETQVQRA-QYEVQSYDAHIlnsnynllgysnsslsDKDGKRASVIV 113
                 688**********966789999999664444422445666.9999999999999999986.99999999998888889999988877755556678899 PP

                 EEEEEEEETTSCCE...EEEEEEEEEEEE CS
        NTF2  81 mvtGelkvddfkkr...rkfsqtfilapq 106
                  ++G++k   ++++   r f+ + +l+p+
  KHJ33792.1 114 LISGSVKYWKEGEEanlRGFTESVVLVPD 142
                 99998885444434477889998888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1253.68
//
Query:       KHJ33793.1  [L=533]
Description: putative aspartic protease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.9e-63  213.8   0.2      5e-63  213.4   0.2    1.1  1  Asp              Eukaryotic aspartyl protease
    1.5e-07   31.8   3.0    5.7e-06   26.7   3.0    2.5  1  TAXi_N           Xylanase inhibitor N-terminal
     0.0061   17.2   0.3        9.6    6.9   0.0    3.2  3  Asp_protease_2   Aspartyl protease
  ------ inclusion threshold ------
      0.025   15.1   0.1        6.5    7.4   0.0    2.9  2  gag-asp_proteas  gag-polyprotein putative aspartyl protease


Domain annotation for each model (and alignments):
>> Asp  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.4   0.2   1.1e-66     5e-63       2     314 ..      72     415 ..      71     416 .. 0.85

  Alignments for each domain:
  == domain 1  score: 213.4 bits;  conditional E-value: 1.1e-66
                 EEEEEEETTTTEEEEEEEETT--SEEEEBTT...EST.SHCHHTSS-B-GGG-TT-EEEEE.EEEEECTTS.EEEEEEEEEEEEETTEEEEEEEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxx.xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp   2 YfgeisiGtpeqkftvifDTGSsdlWVpssk...ckk.ssackshstydpskSstykkngk.slsisYGdg.svsGflsqdtvkvggltvknqefgeat 94 
                 Yf+++++Gtp q++ + +DTGSsd+WVpss+   c+  +        + +++Sst++  g+ +++isY d+  + G ++qd+  +g+ t+ ++e+g+a 
  KHJ33793.1  72 YFANVTVGTPGQNLALQIDTGSSDTWVPSSSatlCRSpKLGGCPDGSFSATQSSTFSLIGQgDFNISYVDNtGAVGDYFQDSFGIGDATLSGFEMGLAL 170
                 9******************************7776655555667889**********7776379*******99************************** PP

                 EESSHHHTTSSSSEEEE-S-GGGSCGG......SCCHHHH....HHHTTSSSSSEEEEEE-STTSSEEEEEESSEEGGGEEEEEEEEEESS......TS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xx RF
         Asp  95 kepgstflaakfdGiLGlgfkeisvee......atpvfdn....lvsqglikepvfsvylnreeeeggeivfGgvDeskykGsltyvpvts......kg 177
                 +++          Gi+G+g+++ +++       + ++++n    lvsqg +k+p++s++ln  e+++g+i+fGgvD++ky G+lt+v+v+        +
  KHJ33793.1 171 QTTI-------GIGIMGIGYNTSEANTntdsggNGTIYQNlpfaLVSQGQVKSPAYSLWLNDLESSTGSILFGGVDTEKYMGKLTTVKVDPisrdygIT 262
                 9999.......68********9999986666655566999*************************************************9885554433 PP

                 STEEEEEEEEETTEEE.....EEEEEEEEEEETTCSSEEEEHHHHHHHHHHHTTEEEETTCEEEEETTGGGGSEEEEEEE...TTEEEEEEGGGGEE.. CS
                 xxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxx.. RF
         Asp 178 ywqielesvtvggktv.....lcssgcqailDtGTsllalptsivekiakaigakksesegeyvvdCdslsslpdisfti...ggakitvpvselvl.. 266
                  +++  +s+++++k+        +  + ailD+GT+++ lp++i++ i +++ga+ + + g ++v Cd  +++ ++s+ +   +g +i+v+vs+lvl  
  KHJ33793.1 263 SFTVAFTSLSATSKSGtdqltPPDFAVPAILDSGTTITLLPDKIAALIFEELGATPEDQLGAVLVPCDLAKNDGTLSYGFggpDGPTIKVAVSDLVLpl 361
                 466666666666655544433345566777**************************************************7777899*********722 PP

                 .......EESSSTTSEEEESEEECCTSSSEEEEHHHHTTEEEEEETTTTEEEEEE CS
                 .......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp 267 .......keeeseesqCilglvseeegdlwiLGdvFlrsayvvfdldnnrvglAe 314
                         + +++++ C lg+ ++ ++  ++LGd+Flrsayvv+dl nn+v lAe
  KHJ33793.1 362 tdnrgrsPKYKNGQTACQLGI-EPAGSLPVLLGDTFLRSAYVVYDLINNQVALAE 415
                 2222211233456789*****.8888888999*********************97 PP

>> TAXi_N  Xylanase inhibitor N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   3.0   1.3e-09   5.7e-06       1     103 [.      72     156 ..      72     237 .. 0.54

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 1.3e-09
      TAXi_N   1 YlvsisiGtppqplklvvDtGsdltWvqCkpcka.....cssqkkpvfdpsksstykavpcssslCkaceasssaksgsssstceyeisygadgssssG 94 
                 Y++++ +Gtp+q+l l +DtGs+ tWv  +  +         ++++ f+ ++sst+                      s   + +++isy  d++ + G
  KHJ33793.1  72 YFANVTVGTPGQNLALQIDTGSSDTWVPSSSATLcrspkLGGCPDGSFSATQSSTF----------------------SLIGQGDFNISYV-DNTGAVG 147
                 9***************************9433331111111223333333333333......................3445666666664.6666666 PP

      TAXi_N  95 vlatdtltl 103
                 ++ +d++ +
  KHJ33793.1 148 DYFQDSFGI 156
                 666666666 PP

>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0    0.0021       9.6       6      28 ..      81     103 ..      74     130 .. 0.83
   2 ?   -2.4   0.0       1.8   7.9e+03      45      67 ..     233     256 ..     220     270 .. 0.73
   3 !    6.7   0.0    0.0026        11      10      38 ..     289     321 ..     286     335 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0021
  Asp_protease_2   6 nGkpvrfllDTGasttlispela 28 
                      G+ + + +DTG+s t ++++ a
      KHJ33793.1  81 PGQNLALQIDTGSSDTWVPSSSA 103
                     38999************999877 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.8
  Asp_protease_2  45 sgagge.vkarlvrldslklgglt 67 
                     ++ gg  +++  ++l ++k+ +++
      KHJ33793.1 233 ILFGGVdTEKYMGKLTTVKVDPIS 256
                     344555488899999999998875 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0026
  Asp_protease_2  10 vrfllDTGasttlispela....eklglkvres 38 
                     v ++lD+G + tl++++ a    e+lg +++++
      KHJ33793.1 289 VPAILDSGTTITLLPDKIAalifEELGATPEDQ 321
                     679**************9978888888888776 PP

>> gag-asp_proteas  gag-polyprotein putative aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0014       6.5       7      36 ..      82     111 ..      75     129 .. 0.84
   2 ?    4.3   0.0     0.014        62      10      29 ..     289     308 ..     286     326 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0014
                      TEEEEEEEETT-SS-EEEHHHHHHTTGGGG CS
  gag-asp_proteas   7 gkpvkflvDTGAsstiiseelaerlglsrk 36 
                      g+ + + +DTG s+t ++++ a+ ++ +++
       KHJ33793.1  82 GQNLALQIDTGSSDTWVPSSSATLCRSPKL 111
                      8899999***************99987765 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.014
                      EEEEEETT-SS-EEEHHHHH CS
  gag-asp_proteas  10 vkflvDTGAsstiiseelae 29 
                      v +++D+G + t++++++a 
       KHJ33793.1 289 VPAILDSGTTITLLPDKIAA 308
                      789**************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3796.13
//
Query:       KHJ33794.1  [L=443]
Description: putative spx domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.2e-11   43.4  16.2     0.0016   18.5   2.1    4.0  4  SPX        SPX domain
  ------ inclusion threshold ------
      0.052   13.1   0.6       0.13   11.9   0.6    1.6  1  SusD_RagB  SusD family
      0.076   12.3   0.1       0.13   11.6   0.1    1.4  1  DUF3450    Protein of unknown function (DUF3450)
       0.17   12.0   1.5        8.6    6.5   0.0    2.8  3  Fib_alpha  Fibrinogen alpha/beta chain family
        2.6    8.2   5.9       0.39   10.8   0.3    2.4  3  CcmD       Heme exporter protein D (CcmD)


Domain annotation for each model (and alignments):
>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   3.7e-05      0.13       1      30 [.       1      30 [.       1      42 [. 0.91
   2 !   16.3   2.6     2e-06    0.0072     176     228 ..      48     100 ..      32     126 .. 0.76
   3 !   18.5   2.1   4.4e-07    0.0016     347     379 ..     130     162 ..     128     168 .. 0.89
   4 ?    3.3   0.0     0.017        63     209     326 ..     177     297 ..     164     313 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.7e-05
         SPX  1 MKFakeLeenlvpEWrdaYldYkqLKKlIk 30
                MK+++++ ++ +p W    +dY+ LK+ Ik
  KHJ33794.1  1 MKYGQTFRAQSAPLWAPYNVDYDELKNIIK 30
                *****************************9 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 2e-06
         SPX 176 etrplraekeFferLdseLnkvetFykakeeefterlesLrkqlealrprrik 228
                 ++r+++ e+ F e L  + + v+ F k+k++e   rl++L++q+ +l+ + + 
  KHJ33794.1  48 DERFQQFENLFYEELSNQHDRVDLFVKSKVDEIHCRLQTLQRQVFRLASKYVL 100
                 3477889*************************************999442222 PP

  == domain 3  score: 18.5 bits;  conditional E-value: 4.4e-07
         SPX 347 LelLKsYqeLNrtAFrKIlKKfDKvtaltaskr 379
                  + LK++    r AF KIlKK+ K t+ +a k+
  KHJ33794.1 130 IRNLKKFVAAQRVAFHKILKKYTKWTSSKALKE 162
                 578************************998876 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.017
         SPX 209 terlesLrkqleal.rprrikeaeerksdlyrwreifglksveaqvfessreldrgelse.eardkevseelekngwikptksklekkrneralekvk. 304
                  ++++sL +q  +l r +r++       d ++ ++++ l+ v++q f + +  +++++++ ++ d+ ++ e+e   +  +++s++++  ++++l+++  
  KHJ33794.1 177 RRDFDSLISQYLNLlRTLRTA-----VPDSDKFKDENYLRPVSQQTFNRIHMESQSQNTYwNEYDDGSEVEEEPYIVYIDPNSESFP--GAKTLASMFl 268
                 567999999999999999999.....5555566678888888999999999888888777866666666666644444444444444..4444444444 PP

         SPX 305 ........pektlkafldsvrrdylrkenr 326
                          ++ l  + +s++r+ l + ++
  KHJ33794.1 269 kakrpvdkVREWLAPVSTSGERQSLFH-KN 297
                 422221100333333344444444444.44 PP

>> SusD_RagB  SusD family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.6   3.5e-05      0.13     212     298 .]     115     232 ..      95     232 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.5e-05
                 HHHHHHHHHHTTTTT-HHHHHHHTT-HHHHHSCCECEECSCSSCCEECCEECCGEEGGCG....G...............................GS- CS
   SusD_RagB 212 kaildERrrElagEgnRwfDLrRWtktlkernklfnagnaadgatkkleefyaesndeeednerk...............................yll 279
                 k+i+ ER++E +gE+ R   L+ +  ++  + ++  ++ ++++++k l+e  +++  ++++++ +                               yl+
  KHJ33794.1 115 KFIRYERHIEKCGEDIR--NLKKFVAAQRVAFHKILKKYTKWTSSKALKELFIDEVLSNPKSFVRrdfdslisqylnllrtlrtavpdsdkfkdenYLR 211
                 89*************98..68998777777777777777778888888887877777777777778888888888899999999*************** PP

                 ---HHHHHH-..TT----TT- CS
   SusD_RagB 280 PIpqseidrn..pnltQNpGY 298
                 P++q+  +r+  +   QN ++
  KHJ33794.1 212 PVSQQTFNRIhmESQSQNTYW 232
                 *******99966666678777 PP

>> DUF3450  Protein of unknown function (DUF3450)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   3.5e-05      0.13      51     146 ..     114     209 ..      82     215 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.5e-05
     DUF3450  51 aeyralkeeleslevyneqlerlvasqeqeiasleeqieeieeierelvpllekmidrLeqfveldlPflleeRqarlakLkelmdradvslaeky 146
                 +++ + ++ +e+     ++l++ va+q+  ++++ ++ ++ +  ++  + +++++++  + fv+ d+  l ++  + l+ L++ + ++d    e y
  KHJ33794.1 114 DKFIRYERHIEKCGEDIRNLKKFVAAQRVAFHKILKKYTKWTSSKALKELFIDEVLSNPKSFVRRDFDSLISQYLNLLRTLRTAVPDSDKFKDENY 209
                 556667777888888899*******************************************************************99986666655 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.2     0.026        94      53     112 ..      33      92 ..      22      99 .. 0.77
   2 ?    6.5   0.0    0.0024       8.6      81     124 ..     107     150 ..      96     157 .. 0.86
   3 ?   -1.8   0.0      0.87   3.1e+03      61     113 ..     277     327 ..     263     345 .. 0.64

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.026
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHH CS
   Fib_alpha  53 eaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvle 112
                 ++++++++i+   +e+++ ++ ++  ++++s++ ++  l +k ++d+   +++ Lq  + 
  KHJ33794.1  33 TTKSHTQAITIPGHEDERFQQFENLFYEELSNQHDRVDLFVKSKVDEIHCRLQTLQRQVF 92 
                 556667777777777777777778899999999999999999999999999999998775 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0024
                 HHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH CS
   Fib_alpha  81 ksskeleeeilrlketidaqesnirvLqnvlesneqkiqkLeqd 124
                 +++++++++ +r+++ i +  + ir+L++ + ++++  +k+ ++
  KHJ33794.1 107 SLNSRCRDKFIRYERHIEKCGEDIRNLKKFVAAQRVAFHKILKK 150
                 578899999********9999**************998887655 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.87
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHH CS
   Fib_alpha  61 ikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvles 113
                 +++ l++  +s +  +++++k  +  e + +++  +i++ + +   Lqn +++
  KHJ33794.1 277 VREWLAPVSTSGE-RQSLFHKNDRLFE-QDSTIGTEIIEDCASYSDLQNGYST 327
                 5555555555554.3555555555555.7788888888888888888887765 PP

>> CcmD  Heme exporter protein D (CcmD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.3   0.00011      0.39       7      36 ..     353     382 ..     352     384 .. 0.92
   2 ?   -3.0   0.1       2.4   8.4e+03      16      28 ..     393     405 ..     389     410 .. 0.59
   3 ?   -1.1   0.1      0.57     2e+03      10      27 ..     419     436 ..     418     438 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00011
        CcmD   7 VWlsYgitllvlagLilwslrdrrrllrel 36 
                 V ++Y+++l +l++++l+    +++l+ e+
  KHJ33794.1 353 VIGCYAASLTLLLIVWLLATTGKKKLRVEV 382
                 99**********************999765 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.4
        CcmD  16 lvlagLilwslrd 28 
                  +l +Li  sl+ 
  KHJ33794.1 393 SLLFALIGISLVY 405
                 5667777777654 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.57
        CcmD  10 sYgitllvlagLilwslr 27 
                 +Y+ + ++++++ + ++r
  KHJ33794.1 419 AYATFIFTFLLNTMIPIR 436
                 8*********99999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (443 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1072  (0.0597914); expected 358.6 (0.02)
Passed bias filter:                      611  (0.0340789); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 3260.66
//
Query:       KHJ33795.1  [L=469]
Description: putative glutathione reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-59  202.0   0.1    1.7e-59  201.5   0.1    1.2  1  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
    1.4e-32  112.2   0.3    4.8e-32  110.5   0.2    1.9  2  Pyr_redox_dim  Pyridine nucleotide-disulphide oxidoreductase,
    1.7e-18   67.0   0.8    7.7e-17   61.6   0.0    2.8  2  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase
      2e-13   50.3   0.0    2.8e-13   49.8   0.0    1.2  1  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
     0.0017   17.5   0.0     0.0063   15.7   0.0    1.7  2  K_oxygenase    L-lysine 6-monooxygenase (NADPH-requiring)
     0.0018   17.0   2.7       0.64    8.7   0.3    3.1  3  HI0933_like    HI0933-like protein
     0.0041   16.5   0.0     0.0052   16.2   0.0    1.2  1  FAD_oxidored   FAD dependent oxidoreductase
  ------ inclusion threshold ------
      0.014   14.5   0.0      0.031   13.4   0.0    1.7  2  GIDA           Glucose inhibited division protein A
      0.022   13.8   1.5      0.073   12.1   0.4    2.2  3  FAD_binding_2  FAD binding domain
      0.025   14.2   1.0       0.41   10.2   0.7    2.2  2  DAO            FAD dependent oxidoreductase
      0.051   12.9   0.1        5.7    6.2   0.1    2.3  2  AlaDh_PNT_C    Alanine dehydrogenase/PNT, C-terminal domain
       0.11   12.3   0.0       0.22   11.4   0.0    1.5  1  3HCDH_N        3-hydroxyacyl-CoA dehydrogenase, NAD binding d
       0.18   11.0   0.2       0.33   10.1   0.2    1.4  1  Thi4           Thi4 family
       0.34   10.1   1.0         16    4.6   0.1    2.8  2  FAD_binding_3  FAD binding domain


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  201.5   0.1   1.3e-62   1.7e-59       2     294 .]       9     333 ..       8     333 .. 0.93

  Alignments for each domain:
  == domain 1  score: 201.5 bits;  conditional E-value: 1.3e-62
                  SEEEE--SHHHHHHHHHHHH.HTS-EEEEE...TTHCHHHCSHHHHCHHHHHHHHHHHHH.........................HHHHCHHHHCCCC CS
                  xxxxxxxxxxxxxxxxxxxx.xxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxx.........................xxxxxxxxxxxxx RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaq.agakvtlve...legtclnggcllskallgvaedaeias.........................evvkklnqgiell 70 
                  d++viGgG +Gla a++++  +gak++l+e   l+gtc+n+gc+++k+  ++a  ae++s                           +k+ln  +e+ 
   KHJ33795.1   9 DYLVIGGGSGGLASARRASGwYGAKTILIEskkLGGTCVNVGCVPKKVTFNAAFIAETISqakaygfsidkavpfswshfkqkrdAYIKRLNGIYERN 106
                  689*****************99*******9999***************************************************999999**99**** PP

                  HCCTCEEEEESCEEEEETEEEC.....TCEEEEEESEEEE---EEE-BC.TCTTC.TTBEECCSECHHHHHHCCSS-TSEEEEES-SHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  71 lgeevvkidpgkkkvklekkke.....gdeekiaydklvlAtGssprdl.gipGvaenvgklvrtldsaealklkllpkrivvvGgGyiGvElAaala 162
                  l++  +++++g++++k +++ e     g++++i ++k++lA G++p  + +i G+    g++    ds+  + l+ +pk+++ vG+Gyi++E+A++++
   KHJ33795.1 107 LEKDSIEYIHGRAHLKGQNEAEvvfddGSKQTIRAKKILLAVGGHPSPPpNILGA----GYG---TDSDGFFDLETQPKKVALVGAGYIAIEFAGMFN 197
                  **77888888888888877777*****99*******************9899999....444...79******************************* PP

                  HHT-EEEEEESSSSSSTTS-HHHHHHHHHHHHHTTEEEEESCEEEEEEETTE..EEEEEETTSCE....EEESEEEE-S-EEES-HHCS.HCCT-EEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxx.xxxxxxxx RF
  Pyr_redox_2 163 klgkevtlveardrllraldkelsaaleealekeGvevklgtsvkeidgnge..klevvledgee....idadlvvvavGvrpstelle.eklgleld 253
                   lg e++l  + d++lr++d+ ++++l+++ e+ Gv v+ +++ k++++++e   l+++ ++ ++      +d++++a+G++p+ + l+ eklg++ d
   KHJ33795.1 198 ALGTETHLFIRHDHFLRKFDPLIQETLTKEYERLGVFVHKRSELKQVEKDKEtgTLTLQYQEADSigeiSGVDCLIWAIGRSPEVKDLGlEKLGIKQD 295
                  ****************************************************8844433333333445589*************************** PP

                  ETTEEE--TTSBESSTTEEE-GGGCTECCSS--HHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 254 erggivvdeflrtnvpgiyaiGDvaggkggpelaqaAvqqG 294
                  +rg+i vde+++tnv++iy +GDv+   g++el+++A+++G
   KHJ33795.1 296 NRGQIIVDEYQNTNVENIYSLGDVV---GKIELTPVAIAAG 333
                  *************************...**********987 PP

>> Pyr_redox_dim  Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       2.9   3.7e+03      42      79 ..     162     199 ..     136     205 .. 0.79
   2 !  110.5   0.2   3.8e-35   4.8e-32       1     108 [.     356     467 ..     356     469 .] 0.98

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.9
                    CHTTHTEEEEEEEEETTTTBEEEEEEECTTHHHHHHHH CS
  Pyr_redox_dim  42 layaetkgfvKlvadaktgkvlGahivGpgageliqel 79 
                     +  +++gf+ l ++ k+  ++Ga  ++ + + ++++l
     KHJ33795.1 162 GYGTDSDGFFDLETQPKKVALVGAGYIAIEFAGMFNAL 199
                    55566888888888889999999999998888888776 PP

  == domain 2  score: 110.5 bits;  conditional E-value: 3.8e-35
                    BEEEEESSSEEEEEES-HHHHHHHHSG..EEEEEEEEECGHHHCHTTH..TEEEEEEEEETTTTBEEEEEEECTTHHHHHHHHHHHHHTTSBHHHH CS
  Pyr_redox_dim   1 iptvvftdpevasvGlteeeAkaagie..ikvgkfpfkangralayae..tkgfvKlvadaktgkvlGahivGpgageliqelavaikagltvedl 92 
                    +p+vvf +pev+++Glte eA +++++  +k+++++f+a+++a+++ae  + +  K+++   ++k++G+hi+G g ge++q++ vaik+g+t++d+
     KHJ33795.1 356 VPSVVFAHPEVGTIGLTEPEAIEKYGKenLKIYQTSFTAMYYAMMEAEdkAPTKYKIICYGPDEKIVGLHILGLGSGEMLQGFGVAIKMGATKADF 451
                    79************************99********************9999******************************************** PP

                    HTSBSSSSSTGGGGHC CS
  Pyr_redox_dim  93 adtihihPtlsealke 108
                    +++++ihPt +e+l++
     KHJ33795.1 452 DNCVAIHPTSAEELVT 467
                    *************987 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.1      0.13   1.7e+02       3      31 ..      11      40 ..       9      43 .. 0.90
   2 !   61.6   0.0     6e-20   7.7e-17       1      72 [.     179     250 ..     179     261 .. 0.93

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.13
                EEECSSHHHHHHHHHHHH.TTSEEEEEESS CS
   Pyr_redox  3 vvvGgGyiglElAgalae.lgkkVtvvers 31
                +v+GgG  gl  A  ++  +g+k+ ++e +
  KHJ33795.1 11 LVIGGGSGGLASARRASGwYGAKTILIESK 40
                7*************9999999999999876 PP

  == domain 2  score: 61.6 bits;  conditional E-value: 6e-20
                 EEEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEECSEEEEEEEEETTS CS
   Pyr_redox   1 kvvvvGgGyiglElAgalaelgkkVtvversdkllrllDeeaskilqeklekngievllntkveeiegsedg 72 
                 kv+ vG+Gyi++E+Ag++++lg +++++ r+d++lr++D+ +++ l+++ e++g+ v+  ++++++e+++++
  KHJ33795.1 179 KVALVGAGYIAIEFAGMFNALGTETHLFIRHDHFLRKFDPLIQETLTKEYERLGVFVHKRSELKQVEKDKET 250
                 6899***************************************************************99874 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.8   0.0   2.2e-16   2.8e-13       1     305 []      11     317 ..      11     317 .. 0.81

  Alignments for each domain:
  == domain 1  score: 49.8 bits;  conditional E-value: 2.2e-16
  Pyr_redox_3   1 iIiGaGPaGlaaaielkkagledylilEkgnignsiyry...pkemtfispsftsekleipdlnaiseetspafslkeeklsrkealeYlrevaksf. 94 
                  ++iG+G  Gla+a  +      + + +E +++g +  +    pk+ tf   +f  e ++  +   +s ++   fs ++ k +r+ + + l+ + +++ 
   KHJ33795.1  11 LVIGGGSGGLASARRASGWYGAKTILIESKKLGGTCVNVgcvPKKVTF-NAAFIAETISQAKAYGFSIDKAVPFSWSHFKQKRDAYIKRLNGIYERNl 107
                  69***************98888999********999885333777777.557777877777766666666655999999***********99988732 PP

  Pyr_redox_3  95 .elpiklfeeVesvkkedegfev..etsketyeAkkviiAtGefdkPnklnipGeeklvkhyskvkefhkyagqkvvViGgknSavDaAlelvrkgae 189
                   + +i++ +    +k ++e  +v  + sk+t++Akk+++A G    P  +ni G+  + + +  + ++ +++ +kv+ +G++  a++ A  + + g e
   KHJ33795.1 108 eKDSIEYIHGRAHLKGQNEAEVVfdDGSKQTIRAKKILLAVGGHPSPP-PNILGAG-YGTDSDGFFDL-ETQPKKVALVGAGYIAIEFAGMFNALGTE 202
                  233455555556677777777774456788*************88887.7*****9.9**********.99*************************** PP

  Pyr_redox_3 190 Vtvvtrgseiekeesdpsyslkpdienrleelvkeekikvlfnaevkeikekeeey..kvktedgkkvev...kddvvlatGykpdlsf..lkkslfe 280
                   ++++r++       ++  +  p i++ l + +++  + v++++e+k++++++e+   +++ ++++++ +    d  + a+G +p+++   l+k +++
   KHJ33795.1 203 THLFIRHD-------HFLRKFDPLIQETLTKEYERLGVFVHKRSELKQVEKDKETGtlTLQYQEADSIGEisgVDCLIWAIGRSPEVKDlgLEKLGIK 293
                  ******98.......4666789*******999988669***********9877765115556666665546668899**********99345557777 PP

  Pyr_redox_3 281 ldedgrpvlteeteetnvpglflaG 305
                  +d+ g++ ++ e + tnv++++  G
   KHJ33795.1 294 QDNRGQIIVD-EYQNTNVENIYSLG 317
                  7777777765.6899*******877 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   4.9e-06    0.0063     134     246 ..     128     229 ..     106     252 .. 0.72
   2 ?   -0.2   0.0      0.34   4.3e+02     296     339 ..     234     277 ..     216     279 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 4.9e-06
  K_oxygenase 134 tveskdaegeeeelearnlvlgvGtepkiPevleklegkervvHsseylerkeellakkriaVvGsGqSaaeifedllrrqkkvelklvtrsealepl 231
                  +v    ++g++++++a++++l+vG++p+ P+ +         + s+ +      + ++k++a vG+G  a e +    +    +e +l++r +++   
   KHJ33795.1 128 EVVF--DDGSKQTIRAKKILLAVGGHPSPPPNILGAG---YGTDSDGFFDL---ETQPKKVALVGAGYIAIEFAGMFNALG--TETHLFIRHDHFLRK 215
                  4444..689*********************9998755...45566666555...489***********9999655444333..477788888887777 PP

  K_oxygenase 232 ddspfvneifsPeyv 246
                   d p+++e ++ ey 
   KHJ33795.1 216 FD-PLIQETLTKEYE 229
                  66.666777766664 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.34
  K_oxygenase 296 rllpnrevesaeaegkgeveltlrneesgee.etlevdavvlATG 339
                   + +++e++++e++++ + +ltl+ +e ++  e   vd+++ A G
   KHJ33795.1 234 FVHKRSELKQVEKDKE-TGTLTLQYQEADSIgEISGVDCLIWAIG 277
                  4567889999999996.6666666666554437888999999877 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.3    0.0005      0.64       2      34 ..       9      42 ..       8      50 .. 0.87
   2 ?    2.9   0.0     0.027        35     138     168 ..     124     154 ..     101     182 .. 0.78
   3 ?    4.0   0.1     0.013        17     111     147 ..     220     257 ..     170     278 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0005
                 SEEEE--SHHHHHHHHHH.HHTT--EEEE-SSSS CS
  HI0933_like  2 dviviGgGaAGlmaAisa.akrgkrVlllekakk 34
                 d +viGgG  Gl  A +a +  g++++l+e++k 
   KHJ33795.1  9 DYLVIGGGSGGLASARRAsGWYGAKTILIESKKL 42
                 779**************97889********9864 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.027
                  ETTE.EEEEE.TTEEEEESEEEE----SS-G CS
  HI0933_like 138 eedgkfrvktkseeeleadklvlAtGGlSiP 168
                  +++ ++ ++  s+++++a+k++lA+GG   P
   KHJ33795.1 124 QNEAEVVFDDGSKQTIRAKKILLAVGGHPSP 154
                  44455666667899*************8766 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.013
                  HHHHHHHHHHHHT-EEE-S--EEEEECETTE..EEEEE CS
  HI0933_like 111 ivdallkelkeagvklrletevksvekeedg.kfrvkt 147
                  i ++l+ke ++ gv ++ ++e+k+vek+++  ++++++
   KHJ33795.1 220 IQETLTKEYERLGVFVHKRSELKQVEKDKETgTLTLQY 257
                  6689*********************9877651444444 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   4.1e-06    0.0052       1      45 [.       9      53 ..       9     144 .. 0.80

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 4.1e-06
  FAD_oxidored  1 DvvVvGGgpaGvaAAiaAar.aGakvlLveergvlGGlltsglvat 45
                  D +V+GGg++G+a A  A    Gak++L+e +  lGG+  + +  +
    KHJ33795.1  9 DYLVIGGGSGGLASARRASGwYGAKTILIESK-KLGGTCVNVGCVP 53
                  669************9987538*******975.6999998876555 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.4e-05     0.031       3      46 ..      11      57 ..       9     149 .. 0.88
   2 ?   -3.4   0.0       3.1   3.9e+03       2      30 ..     180     208 ..     179     218 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.4e-05
                EEE-SSHHHHHHHHHHHH.TT--EEEE..ES-GGGTT--SSSSEEE- CS
        GIDA  3 iViGgGhAGceAAlaaar.lGakvlLi..thkldtiaelsCnpsigg 46
                 ViGgG  G++ A  a+   Gak++Li   +  +t+++++C p    
  KHJ33795.1 11 LVIGGGSGGLASARRASGwYGAKTILIesKKLGGTCVNVGCVPKKVT 57
                7************9887538*******8777789********97655 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 3.1
                 EEEE-SSHHHHHHHHHHHHTT--EEEEES CS
        GIDA   2 viViGgGhAGceAAlaaarlGakvlLith 30 
                 v  +G+G   +e A     lG ++ L+  
  KHJ33795.1 180 VALVGAGYIAIEFAGMFNALGTETHLFIR 208
                 88899*99999999999999999999943 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.4   5.7e-05     0.073       1      32 [.       9      41 ..       9      48 .. 0.88
   2 ?   -0.5   0.0      0.39     5e+02     183     204 ..     132     153 ..     118     165 .. 0.82
   3 ?   -3.3   0.0       2.8   3.5e+03     375     402 ..     291     320 ..     290     323 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 5.7e-05
                   SEEEE--SHHHHHHHHHHHH.TTT-EEEEESSS CS
  FAD_binding_2  1 DviViGsGlAGLaAAleaae.aGlkvavvekeq 32
                   D +ViG+G +GLa+A +a+   G+k++++e ++
     KHJ33795.1  9 DYLVIGGGSGGLASARRASGwYGAKTILIESKK 41
                   789***************988999*****9876 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.39
                    TTTCEEEEEESEEEE-----GG CS
  FAD_binding_2 183 esgrevrirakavvlatgGfgr 204
                    ++g++++irak+++la gG + 
     KHJ33795.1 132 DDGSKQTIRAKKILLAVGGHPS 153
                    6889999************874 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 2.8
                    EEEBETTSBE..STTEEESSBTEEE-STCE CS
  FAD_binding_2 375 Gvetdengrv..ldadgqpipGLYAaGeva 402
                    G++ d +g+   ++ +++++++ Y  G v 
     KHJ33795.1 291 GIKQDNRGQIivDEYQNTNVENIYSLGDVV 320
                    7777777777668888999*****999987 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.7   0.00032      0.41       1      36 [.       9      45 ..       9      56 .. 0.88
   2 ?    2.0   0.0       0.1   1.3e+02     152     226 ..     224     302 ..     193     339 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00032
                EEEEECTSHHHHHHHHHHHHT.T..EEEEESSSSTTSSG CS
         DAO  1 dvviiGGGiiGlstAyeLarr.g..Vtllekgdiagsga 36
                d ++iGGG  Gl+ A+ ++   g  ++l+e++  +g g+
  KHJ33795.1  9 DYLVIGGGSGGLASARRASGWyGakTILIESK-KLG-GT 45
                789***************8766799*****99.777.54 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.1
                 HHHHHHHTT-EEEESECEEEEEEEETCEEEEE....EECT.EEEEEEEEEEE--GGGHHHHHTTCTT...TSEE.EEEEEEEEE CS
         DAO 152 laraaealGveilegtevtgleeedgkvwgve....rttp.gendaadavVnaaGawsdllgllkel...dlpi.spvrgqvlv 226
                 l ++ e+lGv +++++e + +e+ d+  +++     ++ + ge++ +d+++ a G  s ++   k+l   +l i +  rgq++v
  KHJ33795.1 224 LTKEYERLGVFVHKRSELKQVEK-DKETGTLTlqyqEADSiGEISGVDCLIWAIG-RSPEV---KDLgleKLGIkQDNRGQIIV 302
                 788899**************966.4444555566887777888877799999998.44555...33322222332556666666 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.1    0.0044       5.7      28      58 ..       7      38 ..       2      72 .. 0.83
   2 ?    4.4   0.0     0.015        19      26      78 ..     175     246 ..     172     303 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0044
                 --EEEEESTSHHHHHHHHHHHH.TT-EEEEEE CS
  AlaDh_PNT_C 28 pakvlviGgGvaGlqAiatakg.lgakVtvlD 58
                 ++  lviGgG  Gl++++ a+g  gak+ +++
   KHJ33795.1  7 ECDYLVIGGGSGGLASARRASGwYGAKTILIE 38
                 6789***************9983477776665 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.015
                  B---EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTCECEE...................H CS
  AlaDh_PNT_C  26 vepakvlviGgGvaGlqAiatakglgakVtvlDvrparleqleslgakfvev...................l 78 
                  ++p kv  +G+G   ++ + + ++lg ++ ++    + l++++ l +++++                    +
   KHJ33795.1 175 TQPKKVALVGAGYIAIEFAGMFNALGTETHLFIRHDHFLRKFDPLIQETLTKeyerlgvfvhkrselkqveK 246
                  6899*************************9999999999999886666555556666666655555555541 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00018      0.22       1      57 [.     179     241 ..     179     291 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00018
                 EEEEE--SCCHHHHHHHHHHTT-EEEEE-S-HHHHHHHHHHHHHHHHCCTTTTSS-......H CS
     3HCDH_N   1 kvaviGaGtmGagiaavfasagleVvlvdiseealekalekieksleklvekgklk......e 57 
                 kva +GaG +  + a +f + g e++l+ +++++l+k    i+++l k  e+  +        
  KHJ33795.1 179 KVALVGAGYIAIEFAGMFNALGTETHLFIRHDHFLRKFDPLIQETLTKEYERLGVFvhkrseL 241
                 79***********************************99999999998888766663333331 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.2   0.00026      0.33      17      56 ..       7      45 ..       4      62 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00026
                EEEEEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--TT CS
        Thi4 17 esDvvivGaGssGLtaayylakkpdlkvailersvspGGG 56
                e D +++G+Gs GL++a+  +   + k++++e++  +GG 
  KHJ33795.1  7 ECDYLVIGGGSGGLASARRASGWYGAKTILIESKK-LGGT 45
                7899***************99999********984.4554 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1     0.013        16       1      32 [.       7      39 ..       7      43 .. 0.83
   2 ?    3.1   0.1     0.037        47     106     153 ..     219     266 ..      97     308 .. 0.66

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.013
                   EEEEEEE--SHHHHHHHHHHH.HTTHHEEEEES CS
  FAD_binding_3  1 etdVlIVGaGpaGlmlallLs.eaGvrvvlvek 32
                   e+d l++G+G  Gl +a+  s  +G +++l+e 
     KHJ33795.1  7 ECDYLVIGGGSGGLASARRASgWYGAKTILIES 39
                   6899************98765268999998886 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.037
                    HHHHHHHHHHHHHTEEETCSEEEECCEECCCCCCCEEEECCTTEEEEE CS
  FAD_binding_3 106 eleriLvehaeerglqvrfktevesleqdeegvtaevrdketgeeetv 153
                     ++  L ++ e+ g+ v++  e++ +e+d+e+ t +++++e++ + ++
     KHJ33795.1 219 LIQETLTKEYERLGVFVHKRSELKQVEKDKETGTLTLQYQEADSIGEI 266
                    456678888888888888888888888888888888887777766554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 3189.82
//
Query:       KHJ33796.1  [L=1113]
Description: putative ddenn domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-57  194.4   0.1    3.2e-57  193.5   0.1    1.5  1  DENN         DENN (AEX-3) domain
    3.6e-13   49.3   0.7    3.6e-13   49.3   0.7    2.3  3  dDENN        dDENN domain
    2.7e-11   44.0   0.0    8.2e-11   42.5   0.0    1.9  1  uDENN        uDENN domain
    6.8e-05   22.7   6.0    0.00012   21.9   6.0    1.4  1  C1_1         Phorbol esters/diacylglycerol binding domain (C1
     0.0017   18.7   7.2     0.0038   17.5   7.2    1.6  1  C1_2         C1 domain
  ------ inclusion threshold ------
      0.037   14.0   0.1      0.075   13.0   0.1    1.4  1  SPA          Stabilization of polarity axis
       0.12   12.5   2.5       0.23   11.6   2.5    1.4  1  Zf_RING      KIAA1045 RING finger
       0.19   11.6   5.6        0.4   10.6   5.6    1.5  1  PHD          PHD-finger
       0.82    9.6   6.0        1.5    8.7   6.0    1.4  1  zf-HIT       HIT zinc finger
        4.9    7.1   9.3       0.48   10.4   4.3    1.9  2  Prok-RING_1  Prokaryotic RING finger family 1


Domain annotation for each model (and alignments):
>> DENN  DENN (AEX-3) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.5   0.1   1.8e-60   3.2e-57       1     186 []     426     623 ..     426     623 .. 0.99

  Alignments for each domain:
  == domain 1  score: 193.5 bits;  conditional E-value: 1.8e-60
        DENN   1 yipkalcilsrlpffelf.kkiLkalekrlksssk............eaplesfianlllevplPapgktlklvslaveekillqrpe.dselPl.edv 84 
                 +ip+a++il+r   + +f k++L+a+   ++++              ++ple++++nl++e+ +P ++kt++   lav+e +l++r+e  +elP  +++
  KHJ33796.1 426 WIPRAYGILGRDGSLVSFwKEWLRAVIVPMTDGGVlrvpasspkigrWQPLERYVVNLCTEALSPISSKTQVE--LAVRELRLFARKEaINELPGsRNT 522
                 89********************************99*************************************..99***********99*****9*** PP

        DENN  85 dlkelfrcLsienilqlfeavLlErriillSeklarLtsvaealvallyPlkWqhiyiPvlpaslldvleaPtPfiiGvesslleleekpledvvlvDl 183
                 dl++lfr Lsi+ni+ lfe+vL+E+rii+lS+++a+L+ ++ a+ +l+yPlkW +i+iPvlpa+ll++leaP+P+i+G+e+++++  e p++d+vlvDl
  KHJ33796.1 523 DLYALFRSLSIPNIVCLFEFVLSESRIIFLSSHTAMLHLACSAIISLIYPLKWLGIFIPVLPARLLSALEAPCPYIVGIERRYEN-IEMPEDDYVLVDL 620
                 *************************************************************************************.9************ PP

        DENN 184 dkn 186
                 d+n
  KHJ33796.1 621 DEN 623
                 *86 PP

>> dDENN  dDENN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       5.7     1e+04      10      22 ..     358     370 ..     355     370 .. 0.78
   2 ?   -3.5   0.1       6.1   1.1e+04       4      14 ..     718     728 ..     716     729 .. 0.62
   3 !   49.3   0.7     2e-16   3.6e-13       1      49 [.     962    1010 ..     962    1011 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 5.7
       dDENN  10 qpkshrpFlsrfl 22 
                 +  s r++lsr+l
  KHJ33796.1 358 RLASERAYLSRLL 370
                 556899****997 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 6.1
       dDENN   4 eaFlksqpksh 14 
                 +aFl+s+  ++
  KHJ33796.1 718 NAFLQSKNDHS 728
                 57777765555 PP

  == domain 3  score: 49.3 bits;  conditional E-value: 2e-16
       dDENN    1 FdkeaFlksqpkshrpFlsrfletQmFarFIderlelsgsdpsldlFDe 49  
                  F++e+F++s p ++  ++ ++++tQ+F++FI++r+ + +++ps++lFD+
  KHJ33796.1  962 FNMESFIRSLPNDQNTYIDMLRHTQAFNEFIHDREIMPATSPSIQLFDS 1010
                  9************************************9999*******8 PP

>> uDENN  uDENN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   4.6e-14   8.2e-11       1      65 [.     253     319 ..     253     320 .. 0.80

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 4.6e-14
       uDENN   1 PevldryPpadhe.......dfppedvplFcfPeglewsssteksserpepefFsFvLTdedgsrvYGaClt 65 
                 P++ldryPp+           fp + vp+F+fP+++    ++ + +erp+++++ F +T ++  ++YG+ ++
  KHJ33796.1 253 PVLLDRYPPKTATeeverrgRFP-DYVPMFAFPNDI----NIVSADERPRSTWHGFAMTTDEAVKLYGVTVI 319
                 89*******54433344433444.44********95....6789999*********************9775 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   6.0   6.5e-08   0.00012       1      51 [.     870     918 ..     870     920 .. 0.95

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 6.5e-08
                 --EEEE--SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS-SBTT CS
        C1_1   1 HhwvhrnfkqptfCkhCgeflwgkekqglkCswCkllvHkkChekvpkecg 51 
                 H+++h + +  + C+ C+e +  ++  ++ C+ C+ + H +C+  v+  c 
  KHJ33796.1 870 HCFEHDRNDTISVCSICDEKV--EGDGIYNCTKCSTRSHSRCLGTVSLVCS 918
                 9******9*************..99999******************99986 PP

>> C1_2  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   7.2   2.1e-06    0.0038      15      46 ..     877     909 ..     867     910 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 2.1e-06
        C1_2  15 ssesfnCsaCgrkidgff.YsCseCdfslhvrC 46 
                  +    Cs+C++k++g+  Y+C++C    h+rC
  KHJ33796.1 877 NDTISVCSICDEKVEGDGiYNCTKCSTRSHSRC 909
                 455689********9999*************** PP

>> SPA  Stabilization of polarity axis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   4.2e-05     0.075      11      87 ..     532     601 ..     524     627 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 4.2e-05
         SPA  11 ftpeiillinalltskriivlstkasadevsefvLalsnlispagdvlrgfknnsfPyvdlseldalekvpgyIvGv 87 
                  +p+i  l++ +l + rii+ls+++ +  +  ++ a+ +li+p  + l  f    +P  +   l+ale+   yIvG+
  KHJ33796.1 532 SIPNIVCLFEFVLSESRIIFLSSHTAM--LHLACSAIISLIYP-LKWLGIF----IPVLPARLLSALEAPCPYIVGI 601
                 6899*********************99..88899999999999.6666565....9999999999999999999997 PP

>> Zf_RING  KIAA1045 RING finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.5   0.00013      0.23       6      38 ..     881     914 ..     876     928 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00013
     Zf_RING   6 elCeiC.evytaeelypCRvCtkvfHegClrklg 38 
                  +C+iC e  +++ +y+C  C+   H  Cl  + 
  KHJ33796.1 881 SVCSICdEKVEGDGIYNCTKCSTRSHSRCLGTVS 914
                 58****8899*******************98765 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   5.6   0.00022       0.4       1      32 [.     882     912 ..     882     917 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00022
                 SBTTTTSTTSTTSCEEEETTTSCEEETTTSSS CS
         PHD   1 rCavCkkksdeeeelvqCdgCkrwfHqkClkp 32 
                 +C++C++ + e++ +  C +C++  H  Cl+ 
  KHJ33796.1 882 VCSICDE-KVEGDGIYNCTKCSTRSHSRCLGT 912
                 5******.89999999*************986 PP

>> zf-HIT  HIT zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   6.0   0.00085       1.5       4      25 ..     882     918 ..     881     920 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00085
                 B-TTT-S....B-SEE-TTT--E...........ESS CS
      zf-HIT   4 lCgvCgf....pakYkCpkCntr...........yCS 25 
                 +C++C +     + Y+C kC+tr           +CS
  KHJ33796.1 882 VCSICDEkvegDGIYNCTKCSTRshsrclgtvslVCS 918
                 6******9*999***********88888887777777 PP

>> Prok-RING_1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.2       3.1   5.5e+03      28      34 ..     650     656 ..     649     658 .. 0.89
   2 ?   10.4   4.3   0.00026      0.48       5      35 ..     881     910 ..     877     920 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 3.1
  Prok-RING_1  28 tpyHraC 34 
                  +p+H +C
   KHJ33796.1 650 APHHNSC 656
                  8*****9 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00026
  Prok-RING_1   5 kkCpvCgkelkeedDiVvCpeCgtpyHraCy 35 
                  + C++C+++++  d i  C++C t  H  C 
   KHJ33796.1 881 SVCSICDEKVEG-DGIYNCTKCSTRSHSRCL 910
                  67*******975.59***************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.74u 0.30s 00:00:01.04 Elapsed: 00:00:00.45
# Mc/sec: 7468.24
//
Query:       KHJ33797.1  [L=187]
Description: putative u3 small nucleolar ribonucleoprotein mpp10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1404  (0.0783089); expected 358.6 (0.02)
Passed bias filter:                      571  (0.0318478); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1386.99
//
Query:       KHJ33798.1  [L=448]
Description: putative casein kinase i [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-28   98.2   0.0      6e-28   97.9   0.0    1.1  1  Pkinase         Protein kinase domain
    1.4e-14   54.1   0.0    1.8e-14   53.7   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    7.9e-07   28.2   0.0    1.3e-06   27.5   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.9   0.0     1e-31     6e-28       1     213 [.      13     234 ..      13     286 .. 0.84

  Alignments for each domain:
  == domain 1  score: 97.9 bits;  conditional E-value: 1e-31
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH.HHSS--H CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladlle.rkgslse 97 
                 y++ +k+GeGsfG+++++++  ++++vA+K   ++++      +++ E +  k l  +p i ++y++ +e  + +lv +++    l+dl    ++ +s 
  KHJ33798.1  13 YRVGKKIGEGSFGVIFEGTNLLNNQQVAIKFEPRKSDAP----QLRDEYRTYKILVgCPGIPNVYYFGQEGLHNILVIDLLGPS-LEDLFDhCNRRFST 106
                 67899*************************988777776....5789**99999988***********************9854.55555533457*** PP

                 HHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTE.....EEE-SGTTSEESSSSCS........BCTTTSCGGGS-HHHHTTSCBSHHHHHHHH CS
     Pkinase  98 eeakkiakqilegleylHskgiiHrDlKpeNiLidekge.....lKitDFGlakelesssk........ltsfvgtseYlAPEvlkeneyskkvDvWsl 183
                 +++  +akq+l+ ++ +H+k++i+rD+Kp+N+Li + g      + ++DFG+ak++++ ++         +s  gt +Y++     ++e s+  D+ +l
  KHJ33798.1 107 KTVVMVAKQMLSRVQTIHEKNLIYRDIKPDNFLIGRPGSkaanvIHVVDFGMAKQYREPKTkqhipyreRKSLSGTARYMSINTHLGREQSRRDDLEAL 205
                 **********************************9766566778*************999999*****99***********999999999********* PP

                 HHHHHHHHHSS-STTTSSHHHHHHHHHHTH CS
     Pkinase 184 Gvilyelltgkppfsgekgkekvekeldql 213
                 G +++ +l g  p++g k  + ++++++++
  KHJ33798.1 206 GHVFMYFLRGGLPWQGLKAAT-NKQKYEKI 234
                 ***************655443.33333332 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.0     3e-18   1.8e-14       3     227 ..      15     243 ..      13     271 .. 0.82

  Alignments for each domain:
  == domain 1  score: 53.7 bits;  conditional E-value: 3e-18
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkkekek 99 
                  +gkk+GeG+fG ++egt       ++++Va+K   +++++ +   l +e+++ k l   p i +++ +  ++ + ++v++++   +L++   +  +++
   KHJ33798.1  15 VGKKIGEGSFGVIFEGTNL----LNNQQVAIKFEPRKSDAPQ---LRDEYRTYKILvGCPGIPNVYYFGQEGLHNILVIDLLG-PSLEDLFDHC-NRR 103
                  689**************99....8899******988888875...55555555555577888899999999999999999974.5899988887.9** PP

                  SBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE.....TTEEEE-STTTHEETTTSSEE.....EETTSSTSGGGGS-HHHHHHSEEEHHHH CS
  Pkinase_Tyr 100 ltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse.....nkvvkisDfGLardiekddey.....vkkeeaklpvkWmapEslkekkftsksD 187
                  +++k+++ +a q+ + ++ +++k+l+ rd+   N L+ +      +v+ + DfG+a++  + ++      +++++     ++m++ +   ++ + + D
   KHJ33798.1 104 FSTKTVVMVAKQMLSRVQTIHEKNLIYRDIKPDNFLIGRpgskaANVIHVVDFGMAKQYREPKTKqhipyRERKSLSGTARYMSINTHLGREQSRRDD 201
                  *************************************998888899***********994433322345488999999******************** PP

                  HHHHHHHHHHHHTTSSGTTTTS...HHHHHHHHHHTTEES-BB CS
  Pkinase_Tyr 188 vWsfGvllwEiftlgespypgl...kneevleklkegkrlekp 227
                    + G + +  +  g  p++gl   +n++ +ek+ e+k+ ++ 
   KHJ33798.1 202 LEALGHVFMYFLR-GGLPWQGLkaaTNKQKYEKIGEKKQTTQI 243
                  *****88776655.99999887333566677777555555554 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.0   2.2e-10   1.3e-06     319     406 ..     120     211 ..      78     213 .. 0.87

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 2.2e-10
  Pkinase_fungal 319 hrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddsses.....garertGTleFmaievlkgeeHsyrhDLESffyvllw 406
                      +  + +++++ rDi  +N li  + +++ +   ++D+ +ak++ ++++++     +++   GT+ +m+i+   g e s r+DLE +  v+++
      KHJ33798.1 120 VQTIH-EKNLIYRDIKPDNFLIGRPGSKAANVIHVVDFGMAKQYREPKTKQhipyrERKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMY 211
                     56677.99***************999999****************9988886666555999*************************9999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (448 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.19s 00:00:00.69 Elapsed: 00:00:00.36
# Mc/sec: 3691.14
//
Query:       KHJ33799.1  [L=441]
Description: putative u3 small nucleolar ribonucleoprotein mpp10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-101  341.2  31.8   1.2e-101  341.1  31.8    1.0  1  Mpp10     Mpp10 protein


Domain annotation for each model (and alignments):
>> Mpp10  Mpp10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  341.1  31.8  6.9e-106  1.2e-101     169     552 ..       9     425 ..       1     440 [. 0.86

  Alignments for each domain:
  == domain 1  score: 341.1 bits;  conditional E-value: 6.9e-106
       Mpp10 169 k....kkkkksvvddkFFkldemekflekeekkeerkkeeeeddeeidyfedlss.......ddedeee...........kksaedlkYeDFFdkpeek 245
                 k     ++ k   +d+FF++de++k++e  e +++ +  ++++++e ++ ++ ++        ++d+e+           + +a+d++Y+DFF++p + 
  KHJ33799.1   9 KfdgvYQEDKFGLNDGFFSIDEFNKQTEMLELDDTLNPLQDDSEDESNFGSEKDDmaldspeGENDDESisdseedisatMANANDIMYNDFFKPPPR- 106
                 2222233444455******************9998887666666666666666666677776566666689999999**99***************99. PP

       Mpp10 246 kkkkkkkkdeeeadeeeedeeeeeeeeeeeeeeeeeedleeedeeeeeeeeeedeeekeekkkveeekeeeeekSsfekrqeklqekIkkLEeealaeK 344
                 k+ k+++++++ ++++ ++e++ +e   e+ +++ ++dl+e++ +e++++e ++e+ +          +  ++kS++e++q+kl+++I++LE++ +a  
  KHJ33799.1 107 KQGKDEQQSKFLERQKRKSEQQLDEPSIERTMSDVRRDLFEDSAHEDSDDEVNEEDPS----------DPLSRKSTHERQQAKLMKEIRRLEAASVASR 195
                 566666666666666666666669***************9998777766666665555..........46789************************** PP

       Mpp10 345 pWqLkGEvtAkdRPenSLLeedleFdrtarpaPviTeettetLEdiIkqRIkdkafDDveRkvkpkeeekeykk.rleldqeKskeSLAeiYEkeYlkq 442
                 +W+L+GE++A+dRP nSLLe++leF+rt +p+P +T e++e++E++Ik+RI+ ++fD+v+R+  ++ ++k+ +   +eld++K+++SLAeiYE+e++k+
  KHJ33799.1 196 EWALSGEARAADRPLNSLLEKELEFERTGKPVPEVTAEVSESIESLIKRRILAQEFDEVIRRRPDDLSKKNVRRgIFELDDNKPQQSLAEIYEEEHIKA 294
                 ******************************************************************99988765168********************** PP

       Mpp10 443 te...nkqekeeeekkeHeeIkklmksLflkLDALsnfhFtPkpakpevkivsnlpaismEEvapvav....SdasllAPeEvkk.............. 520
                 ++     ++++e+ kke +eI+ l+k L++kLD Ls++hF+Pkp++p++ ivs++++i+mE+++p++      + s+lAP+E++k              
  KHJ33799.1 295 NNpdtYISKTDEKIKKEEREIEILWKGLSAKLDTLSSWHFKPKPPAPSLTIVSDIATITMEDAQPTTGsgitGSESMLAPQEIYKagkdkdsigkddvv 393
                 **9988899*********************************************************9744446899**********************8 PP

       Mpp10 521 kkkgdvkskeErtktdkkreRrkkKrkkrkkl 552
                  ++g +++++E+t+++k r+Rr+ K+k +k+ 
  KHJ33799.1 394 PRSGLPIARQEMTREQKLRRRRRAKEKISKRG 425
                 445************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1049  (0.0585086); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.38
# Mc/sec: 3444.16
//
Query:       KHJ33800.1  [L=300]
Description: putative short-chain dehydrogenase reductase family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-50  170.8   0.0      4e-50  170.6   0.0    1.0  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
      8e-39  133.1   0.0      1e-38  132.8   0.0    1.1  1  adh_short     short chain dehydrogenase
      5e-11   42.8   0.0    6.5e-11   42.5   0.0    1.1  1  KR            KR domain
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.15   11.4   0.0    1.2  1  PALP          Pyridoxal-phosphate dependent enzyme


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.6   0.0   8.9e-54     4e-50       4     233 ..      67     296 ..      62     297 .. 0.93

  Alignments for each domain:
  == domain 1  score: 170.6 bits;  conditional E-value: 8.9e-54
                   TSHHHHHHHHHHHTT-EEEEEESSGGH..HHHHHHHHHHTTSEE..EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHHH CS
  adh_short_C2   4 sgIGraiAkalaeeGaevvltdlneea..kkrveelaeelgaev..lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsreefd 96 
                   sgIGraiA ++a eGae  ++ l ee+  + ++++l+ee g ++  ++ D +   +++++ve++++ +g+++ilv n g+    k+++ e+++e++ 
    KHJ33800.1  67 SGIGRAIAILYAMEGAESTIVFLPEEEkdAVETKRLVEEKGGQLhlFPSDLRGHMACKNIVEKAKKAMGSINILVLNHGYQAM-KENISEITDEQWI 162
                   8****************99999988884456778899999988446************************************9.************* PP

                   HHHHHHTHHHHHHHHHHHHHCTSCCEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTTHHHHHHHHH CS
  adh_short_C2  97 raldvnlyslfllakaalplmkeggsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikgfdelleele 193
                   +++d+n++ +f l+k+ lp+m +g  i++++sv   ++ ++   y+ +K+a++a+tr+l ++  ++giRvNavspgpi T++  +  +    +++ e
    KHJ33800.1 163 TTFDINVHPFFFLSKYTLPHMSSGDVIITCASVNPYIGRSDLLDYTSTKGAIIAFTRALSNQQLKNGIRVNAVSPGPIWTPLIPATMND---RAQRE 256
                   **********************************************************************************7777644...44445 PP

                   HHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTG CS
  adh_short_C2 194 araplgrlgtpeevaeaalfLasdeasyitGqtlvvDgGl 233
                     +p+gr g+p+eva + +fLas+++s+i+Gq l+ +gG+
    KHJ33800.1 257 FTSPMGRPGQPSEVATCFVFLASKDSSFISGQCLHPNGGV 296
                   579************************************7 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.8   0.0   2.2e-42     1e-38       1     187 [.      58     245 ..      58     253 .. 0.93

  Alignments for each domain:
  == domain 1  score: 132.8 bits;  conditional E-value: 2.2e-42
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEE..EESCHHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---S.S--SSGGGC CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvv..vdrseekleevakelkeegakalaiqvDvtdreevealvekavkklgkldvLvnNAGi.tgsgpfsel 96 
                 k++l+tG++sGIGraia  +a eGa+ ++  + ++e+++ e++  ++e+g +++ ++ D++ + +++++veka+k +g++++Lv N G  + ++++se+
  KHJ33800.1  58 KTALITGGDSGIGRAIAILYAMEGAESTIvfLPEEEKDAVETKRLVEEKGGQLHLFPSDLRGHMACKNIVEKAKKAMGSINILVLNHGYqAMKENISEI 156
                 79***********************866644777778888888888988****************************************778899**** PP

                 SHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHH CS
   adh_short  97 seeewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdma 187
                 ++e+w  ++++N++  f l++  lp+m   s+  I++ +Sv+   +   +  Y+++K+a++++tr+l+++  + girvnav PG++ T++ 
  KHJ33800.1 157 TDEQWITTFDINVHPFFFLSKYTLPHMS--SGDVIITCASVNPYIGRSDLLDYTSTKGAIIAFTRALSNQQLKNGIRVNAVSPGPIWTPLI 245
                 **************************98..667899999***********************************************99975 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   1.5e-14   6.5e-11       2     169 ..      59     227 ..      58     240 .. 0.88

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 1.5e-14
                 EEEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE-.--------TTT CS
          KR   2 tylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGviha.Agvlrdkllee 99 
                 t litGG  g+G+++a   a +ga++ +++  +  +++d+ ++ + +e++g + ++++ D+  + a ++++e++k+ +++i+  +      ++++ ++e
  KHJ33800.1  59 TALITGGDSGIGRAIAILYAMEGAESTIVFLPE--EEKDAVETKRLVEEKGGQLHLFPSDLRGHMACKNIVEKAKKAMGSINILVLNhGYQAMKENISE 155
                 579********************8877777676..466666688889999*******************************98665505566799**** PP

                 --HHHHHHHHTTTTHHHHHHHHHTTT..S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHHHHHT CS
          KR 100 mtaedleqvlapKvkGawnLhelled..esldffvlfSSiagllgsagqanYaaaNaflDalaeyrrsqglp 169
                  t+e++ + +   v+    L +++ +  +s d++++++S+   +g     +Y+++   + a+ +  ++q+l+
  KHJ33800.1 156 ITDEQWITTFDINVHPFFFLSKYTLPhmSSGDVIITCASVNPYIGRSDLLDYTSTKGAIIAFTRALSNQQLK 227
                 ***********************9988899*************************99999999998888876 PP

>> PALP  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.4e-05      0.15      53     134 ..      56     142 ..      44     172 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.4e-05
                 TTTSEEEEEBSSHHHHHHHHHHHHHT-EEEEE.EETTS-..HHHHHHHHHTT-EEEEECCH...HHHHHHHHHHHHHHSTTCEE--TT CS
        PALP  53 tgaktvveassGNhgralAaaaallGlkvtiv.vpadas..pekvallrllGaevvevggd...ydeavaaaaelaaegegaylvsqf 134
                 +g++ +++++++  gra+A+  a+ G ++tiv +p+  +   e ++l ++ G +++++++d    ++++++++++ +   g +++   
  KHJ33800.1  56 EGKTALITGGDSGIGRAIAILYAMEGAESTIVfLPEEEKdaVETKRLVEEKGGQLHLFPSDlrgHMACKNIVEKAKKA-MGSINILVL 142
                 468899*********************8888767777774459***************88866677777777777776.555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2450.83
//
Query:       KHJ33801.1  [L=484]
Description: putative 4-aminobutyrate aminotransferase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   7.4e-110  367.4   0.0   8.4e-110  367.2   0.0    1.0  1  Aminotran_3    Aminotransferase class-III
    0.00035   19.9   0.0    0.00049   19.4   0.0    1.2  1  Aminotran_1_2  Aminotransferase class I and II


Domain annotation for each model (and alignments):
>> Aminotran_3  Aminotransferase class-III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  367.2   0.0  9.4e-114  8.4e-110       8     406 .]      59     482 ..      52     482 .. 0.97

  Alignments for each domain:
  == domain 1  score: 367.2 bits;  conditional E-value: 9.4e-114
                  -SCEEEEEEEBTEEEETTS-EEEESSHHHHTTTT-BT-HHHHHHHHHHHTT-S---TTTCEEHHHHHHHHHH....HHHCT-..SEEEEESSHHHHHH CS
  Aminotran_3   8 nlllvitkaeGvyltdvdgkrylDlvssiavvnlGhahPkvvkavkeqaaklshvsfgaltnepalklaekl....lklapkgldkvflansGseAve 101
                   ll++++k+ G++++d dg+ +lD+ ++ia++++G+++ +++ a+++ ++   +++++a +n p+ ++a ++    lk+ap gl++vf+a sGs+A+e
   KHJ33801.1  59 VLLADYEKSLGNFIADRDGNLLLDVFAQIASIPVGYNNYNLSRAARTEQMVDAIINRPAPGNFPSYNWASIIksgiLKVAPRGLNQVFTALSGSDANE 156
                  45689*******************************************************************9999********************** PP

                  HHHHHHHHHHHHTSHCTT-......................EEEEETTT---SSHHHHHHSS--TTTTTTCTTB...-TSEEEE-TTBGGGTB-HHHH CS
  Aminotran_3 102 tAlKlarkyarekkatekt......................kiiafkgafHGrtlgalsvtgskkkyktlfgpf...lpevvrlkypdeevlkeneee 174
                  tA+K+a++y r++++  +                       +i++f+++fHGr++g+ls+t+sk+++k ++++f   +++++ lkyp+ e+ +ene+e
   KHJ33801.1 157 TAYKAAFMYRRQQERGGRIpefsdeeltscmlnqapgapklSILSFTSGFHGRLFGSLSTTRSKPIHKLDIPAFdwpQAKFPNLKYPLDENYQENEKE 254
                  **************999999********************************************************9********************* PP

                  HHHHHHHHHHHHCHTCCCEEEEEE-SCETTTTSEB--CCHHHHHHHHHHHHT-EEEEE-TTTTTTTTSSSSGGGGC..TS--SEEEE-.GGGGTT.SS CS
  Aminotran_3 175 eaalleelealekkkkdevaAvivEpiqgegGvvvaspeflaklrelckkhdvllivDEvqtGfGrTGklfAleha..gvspDlmtla.KaltgG.lp 268
                  ea ++ e+e++++  +   +AvivEpiq+egG+++asp+f++klr+l+kk++vllivDEvqtG+G TGk++A+eh+  +++pD++t++ Ka+++G + 
   KHJ33801.1 255 EAEAIAEVEEIIESYHVPPCAVIVEPIQSEGGDNHASPDFFRKLRTLTKKKNVLLIVDEVQTGVGSTGKFWAHEHWnlDTPPDIVTFSkKAQAAGfYY 352
                  ****************************************************************************9999********9******999 PP

                  -EEEEEEHHHHTTS-TTSB--TTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTT-.TTEEEEEEE..TTEEEEEEBCCCETTCHHH CS
  Aminotran_3 269 lsavlataevmqalapgshgsTfgGnplacavalavleiieeekllenaqelgaalkegLeelqkky.evikevRgk..Glmiaielkeeaevkekei 363
                   +  l++ + ++++      +T++G+ +++++++a+++ ie ++l++n++ +g++l++g  +l+k+y + i ++Rgk  G++ia++ + ++      +
   KHJ33801.1 353 GNPDLRPCQSYRQF------NTWMGDASRALLFQAIVDEIESKNLVQNTAIVGNYLYNGIDSLAKQYpKEILNLRGKglGTFIAFDSPRRDY-----F 439
                  9*************......********************************************************9666788887666665.....* PP

                  HHHHHHCTEE-EEETTTEEEE---TT--HHHHHHHHHHHHHHH CS
  Aminotran_3 364 lkkakekGvlilsaGdnvirllppliitdeeidelleilkkal 406
                  l ka+  Gv+++++G++++rl+p+l+++++++d ll+++++++
   KHJ33801.1 440 LRKARSIGVNMGGCGERSLRLRPMLVFQKHHADILLSAFEDII 482
                  ****************************************997 PP

>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   5.5e-08   0.00049     136     240 ..     263     358 ..     228     406 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 5.5e-08
                    HHHHTTHHCTTE....TEEEEEEESS-TTT--B.--HHHHHHHHHHHHHTTEEEEEEETTTTCBSSSSHTHHH.HGGSTTSTTEEEEEESSSTTSS CS
  Aminotran_1_2 136 eealkeapegnk....ktkvilvesphNPtGtv.atleeleklldlakkynlllfvDeaYagfvfgsldavat.ranveeepnllivgslsKafGl 225
                    ee +            +++ ++ve +++  G+  a+++  +kl +l+kk+n+ll+vDe+  g  ++  +++a  + n+++ p+     ++sK   +
     KHJ33801.1 263 EEII-------EsyhvPPCAVIVEPIQSEGGDNhASPDFFRKLRTLTKKKNVLLIVDEVQTGVGST-GKFWAHeHWNLDTPPD---IVTFSKKAQA 347
                    3333.......03334799999999999999864899999*******************6666665.689999999****999...679****999 PP

                    GGG-EEEEEEEHHHH CS
  Aminotran_1_2 226 aGeRvGyilgnaavv 240
                    aG    + +gn++++
     KHJ33801.1 348 AG----FYYGNPDLR 358
                    99....888877443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.23s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3338.56
//
Query:       KHJ33802.1  [L=316]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.075   13.1   2.3       0.13   12.3   2.3    1.4  1  ArfGap    Putative GTPase activating protein for Arf


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   2.3   7.4e-06      0.13      16      93 ..     204     279 ..     192     289 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 7.4e-06
                 -TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG-T CS
      ArfGap  16 CaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekrsk 93 
                 C +Cg ++ +   l ++++ C +C g Hrs  ++    r ++l   ++e++++++++g+++ +++l ak+ +e+ +s+
  KHJ33802.1 204 CGNCGFTNHS-EELCMAATKCRNCGGPHRSD-SRRCLARPTRLGAPTKEQMKTFRQVGEREYQAVLRAKVAEESANSA 279
                 6777554433.234456677**********8.677789********************************88877733 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2318.98
//
Query:       KHJ33803.1  [L=633]
Description: putative mynd domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-07   31.0  20.0    4.4e-07   29.9  20.0    1.6  1  zf-MYND   MYND finger
  ------ inclusion threshold ------
       0.39   11.2   8.3       0.96   10.0   8.3    1.6  1  zf-TAZ    TAZ zinc finger


Domain annotation for each model (and alignments):
>> zf-MYND  MYND finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9  20.0   4.9e-11   4.4e-07       3      38 .]     589     628 ..     585     628 .. 0.86

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 4.9e-11
                 TT--.....B-SC...E-TTTS-SEESSHHHHHHCHHHHCCCH CS
     zf-MYND   3 vCgk....aealk...kCagCksvfYCskeCqradwksHkteC 38 
                 +Cgk    +   +   kC +C++++YCskeCq+++w  H+++C
  KHJ33803.1 589 QCGKweqyT---RqfaKCRRCRRTKYCSKECQKNAWIFHRHWC 628
                 799995444...3456*************************** PP

>> zf-TAZ  TAZ zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   8.3   0.00011      0.96      14      64 ..     573     628 ..     562     632 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00011
      zf-TAZ  14 Ckeaekee...kCkklpsCkkmkellkHlksck...kkkeCkvkvCkslrqllr.hak 64 
                 C++++++    +C  + +C k ++  + +++c+   ++k C+ k C++ + +++ h+ 
  KHJ33803.1 573 CRKDDSRGgirQC-AYYQCGKWEQYTRQFAKCRrcrRTKYCS-KECQKNAWIFHrHWC 628
                 88777655888**.5*****************98754467*9.99*999998888986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (633 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       685  (0.0382063); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4414.01
//
Query:       KHJ33804.1  [L=439]
Description: putative pseudouridine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-45  154.8   0.0    5.3e-45  153.4   0.0    1.6  1  TruB_N      TruB family pseudouridylate synthase (N terminal 
    3.8e-07   30.2   0.0    7.3e-07   29.2   0.0    1.4  1  TruB_C_2    tRNA pseudouridylate synthase B C-terminal domain
  ------ inclusion threshold ------
       0.11   11.5   0.0       0.17   10.9   0.0    1.2  1  Capsid-VNN  nodavirus capsid protein
       0.18   11.9   2.0       0.38   10.9   0.1    2.2  2  DUF4710     Domain of unknown function (DUF4710)


Domain annotation for each model (and alignments):
>> TruB_N  TruB family pseudouridylate synthase (N terminal domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.4   0.0   1.2e-48   5.3e-45       7     134 ..      78     208 ..      70     219 .. 0.92

  Alignments for each domain:
  == domain 1  score: 153.4 bits;  conditional E-value: 1.2e-48
                 S.-EEESS---TT-EEEEEEEEGGGGGGHHHCTTS-EEEEEEEEETEEETTSBTTS-EEE-.--TT--HHHHHHHHHHC-EEE---------------- CS
      TruB_N   7 k.kvGhtGtLDplatGvLvvavgeaTklleylleadKeYeatirlgaetdteDaegeileeekveklteekleevlkkftGeieqvppmySAvkvnGkr 104
                 + k+Gh+GtLDplatG+L+ ++g++Tk l+ +l  +KeYea + +g++tdt+D+ g++l+++ ++++t+e +e++l++f+G+++q pp +SA+k+nGk+
  KHJ33804.1  78 QvKIGHGGTLDPLATGILITGIGRGTKSLHDFLMCKKEYEAIVLFGTSTDTYDRVGKVLKRAPYKHITKEVVEKALENFRGKYMQLPPLFSALKMNGKP 176
                 34***********************************************************99************************************ PP

                 ------------..-----EEEEEEEEEEEEE CS
      TruB_N 105 lyelaregeeve..rkkrkvtiyelellevee 134
                 lye+areg+e+   ++kr+v+++elel+e+ e
  KHJ33804.1 177 LYEYAREGKEIPreIEKRPVEVHELELVEWME 208
                 ********999622678***********9865 PP

>> TruB_C_2  tRNA pseudouridylate synthase B C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   1.6e-10   7.3e-07       1      41 [.     374     415 ..     374     428 .. 0.87

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 1.6e-10
                 HHHHHHHHHHTTS-EEEEEEEEEEETTE.GG-..B-HHHHHH CS
    TruB_C_2   1 RtLcdDiGeaLgcgAhveeLRRtrvgpf.deedmvtledLed 41 
                 R+Lc+D+G a+   A ++eL+Rtr g++   ed ++  dLe+
  KHJ33804.1 374 RSLCHDLGVAVQSAALMAELKRTRQGDYkIGEDTLEYADLEK 415
                 9***************************74455688888876 PP

>> Capsid-VNN  nodavirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   3.7e-05      0.17      18      76 ..      65     128 ..      57     139 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 3.7e-05
  Capsid-VNN  18 ansqprrratqrrr....sgradaplakastitgfgratndvhisgmsri.aqavvpagtgtdg 76 
                 ++sq rrr  ++ +     g +  pla    itg+gr t+ +h   m +   +a+v  gt td 
  KHJ33804.1  65 SKSQKRRRREKKIQvkigHGGTLDPLATGILITGIGRGTKSLHDFLMCKKeYEAIVLFGTSTDT 128
                 567777776554331112466678*******************99998752689*******996 PP

>> DUF4710  Domain of unknown function (DUF4710)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   8.6e-05      0.38      15      48 ..      48      82 ..      37      88 .. 0.85
   2 ?   -0.5   0.2      0.32   1.4e+03      30      51 ..     131     153 ..     104     160 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 8.6e-05
     DUF4710 15 r.YepLeededqkeakeekkkkkkqklKKyrKnvg 48
                + + p +e+e  ++ +e k++k++++ KK++ ++g
  KHJ33804.1 48 KlFAPWIESERISRDQESKSQKRRRREKKIQVKIG 82
                54778899999999****************98887 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.32
     DUF4710  30 eekkkkkkqklKKyrKnv.gKal 51 
                    k  k+  +K + K v  Kal
  KHJ33804.1 131 RVGKVLKRAPYKHITKEVvEKAL 153
                 45567788999999887526776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3226.92
//
Query:       KHJ33805.1  [L=747]
Description: putative bifunctional catalase peroxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-85  287.0   0.0    2.5e-45  155.0   0.0    2.3  2  peroxidase  Peroxidase


Domain annotation for each model (and alignments):
>> peroxidase  Peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.0   0.0   1.4e-49   2.5e-45       9     228 ..      75     408 ..      60     409 .. 0.90
   2 !  130.0   0.0   5.9e-42   1.1e-37       2     227 ..     415     715 ..     414     717 .. 0.89

  Alignments for each domain:
  == domain 1  score: 155.0 bits;  conditional E-value: 1.4e-49
                 CCC.TTTHCHHHHHHHHHHHTT.......SSTTSCHHHTCCHHCSGGGTTTHHHHHHHHHHHHHCTT.....S-HHHHHHHHHHHHHHCTT--..--EE CS
  peroxidase   9 lka.drdmgpsllrlafhdcfv.......gGcdgsvlllepektapaNaslrkgldvldaikakleaacpgvvScADlialaardavelaggplvpvsl 99 
                 + a  +++g+ ++rla+h++++       gG   +  +++p +++p+N++l+kg+++l++ik+k+++     +S+ADl+ la+++a+e +gg+++ ++ 
  KHJ33805.1  75 WPAdFGHYGGLFIRLAWHSAGTyrstdgrGGGGEGQHRFAPLNSWPDNTNLDKGRRLLWPIKQKYGR----YISYADLFLLAGNVAIESMGGKTFGFAG 169
                 33346889999*****************9666666889****************************9....6*********************99**** PP

                 ---S-SSGGG.S-S..................................................................-.-TS-HHHHHHHHHHHT- CS
  peroxidase 100 GRrDatessa.sev.snl..............................................................Pdptasvdelrdkfarkgl 134
                 GR D++e++  +++                                                                  Pdp as++++r +f r+ +
  KHJ33805.1 170 GRVDTWEADDsTYWgG-EttwlgndirytsenigipgrgsldgdqqkmnhskihsrnlenplgaahmgliyvnpegpdgiPDPVASARDIRVTFGRMAM 267
                 **********777843.469*****************************************************99999999****************** PP

                 -HHHHHHH.HGGGGC-EESHH................SS-GGGT.....HHS..............EETS-STHHHHHHCC.................. CS
  peroxidase 135 tdeelvaL.sGaHtiGkahcssfs.rly.a...aadpaldaayaaekC.asgnte......lvdldtptkfdnsyfknlle.................. 202
                 +dee+vaL +G+Ht+Gk+h++  + ++  +   a+++a++ ++a+++C  +g ++      ++ ++tptk++n y + l++                  
  KHJ33805.1 268 NDEETVALiVGGHTFGKSHGAASTdNVGcEpeaAPIEAQGLGWANANCyGKGPDTitsgleVIWTKTPTKWSNYYLEYLFKyewelskspagahqwvak 366
                 *******************9876665554378899999******99**87777778676654444599******************************* PP

                 ................T-EEEHHHHHHHHSCCCHHHHHHCCC CS
  peroxidase 203 ................krgllrsDqvllsdsetralvekyae 228
                                    +l+sD++l  d+ ++++  ky +
  KHJ33805.1 367 nvepfipdafdpkkkhPPRMLTSDLALRFDPVYEKISIKYLK 408
                 **************9999*****************9998876 PP

  == domain 2  score: 130.0 bits;  conditional E-value: 5.9e-42
                 HHHHHHCCCC.TTTHCHHH.........HHHHHHH.......................................HTT........SSTTSCHHHTCCHH CS
  peroxidase   2 rafvkaalka.drdmgpsl.........lrlafhd.......................................cfv........gGcdgsvlllepek 43 
                 ++f++a++k  +rd+gp +         + l+++d                                       +          gG++g++++lep+k
  KHJ33805.1 415 DSFARAWFKLlHRDLGPRTrwlgpeipkEILIWEDpipainhpiidekdiielkkqilgtkislnkyistawasA-StfrggdkrGGANGARIRLEPQK 512
                 6899*******9999998788899999999********9999999999999999999999999999887766651.046699999************** PP

                 CSGGGT..TTHHHHHHHHHHHHHCTT.......S-HHHHHHHHHHHHHHCTT--..--EE---S-SSGGG.S-S................-.-TS-HHH CS
  peroxidase  44 tapaNa..slrkgldvldaikakleaacpg..vvScADlialaardavelaggplvpvslGRrDatessa.sev.snl............Pdptasvde 124
                 +++ N+  +l+++l vl+aik+k+++++++  +vS+ADli+l +++a+e+a+g +v++++GR Da+++++ +++ +nl             +p+  +++
  KHJ33805.1 513 SWKVNNpeQLDQVLSVLEAIKKKFNSSQSDrkKVSMADLIVLSGTAALEKASGSSVKFTPGRADASQEQTdIQSfQNLepiadgfrnyghSTPRVLTEQ 611
                 **************************7755447*********************99**************99998888866666555555488888888 PP

                 .HHHHHHHHT--HHHHHHH.HGGGGC-EESHH...........SS-GGGT....HHS........EETS-STHHHHHHCC................... CS
  peroxidase 125 .lrdkfarkgltdeelvaL.sGaHtiGkahcssfsrlyaaadpaldaayaaekCasgntelvdldtptkfdnsyfknlle................... 202
                  l+dk++ ++l ++el++L +G++++ ++                            + + v++++p+ ++n++f+nll+                   
  KHJ33805.1 612 fLIDKAQLLTLRPHELTVLvGGLRVLNTNFDG-------------------------SLHGVFTERPGLLTNDFFVNLLDnditwrsitdnqifegidr 685
                 9****************************932.........................122577789********************************* PP

                 .....T-EEEHHHHHHHHSCCCHHHHHHCC CS
  peroxidase 203 .....krgllrsDqvllsdsetralvekya 227
                      k++++r+D+ ++s+se+ra++e+y 
  KHJ33805.1 686 ktgkkKWTATRADLIFGSHSELRAIAEVYG 715
                 ****************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (747 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.40
# Mc/sec: 5553.37
//
Query:       KHJ33806.1  [L=137]
Description: putative atp-dependent dna helicase pif1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-29  103.2   0.0    2.4e-29  102.9   0.0    1.1  1  Helitron_like_N  Helitron helicase-like domain at N-terminus


Domain annotation for each model (and alignments):
>> Helitron_like_N  Helitron helicase-like domain at N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.9   0.0   1.3e-33   2.4e-29      93     190 .]       1      93 [.       1      93 [. 0.95

  Alignments for each domain:
  == domain 1  score: 102.9 bits;  conditional E-value: 1.3e-33
  Helitron_like_N  93 mqekrqdlmaivrelgkPdlFiTltcndkwpeikeelrkkkkaqtaadrpdivarvFhrkleaflkdllkegvfGkvsayvytvEfQkRGlpHa 186
                      m++++q++mai r lgk   F+T+t+n+kwpei ++l  k++ qta +rpd+va vF++kl+a+ +  +  ++fGk++  v t+E+QkRGlpHa
       KHJ33806.1   1 MTKSYQNAMAITRILGKT-SFVTFTANPKWPEILRQL--KPG-QTADSRPDLVAIVFKQKLDALHELKV-TNIFGKCVGDVFTIEYQKRGLPHA 89 
                      6899************96.5*****************..999.********************988775.59********************** PP

  Helitron_like_N 187 HlLl 190
                      H+L+
       KHJ33806.1  90 HILI 93 
                      **97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (137 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       263  (0.014669); expected 358.6 (0.02)
Passed bias filter:                      257  (0.0143343); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.24s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 1118.19
//
Query:       KHJ33807.1  [L=380]
Description: putative rrna processing protein ebp2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.9e-94  313.8  17.5    9.9e-94  313.8  17.5    2.1  2  Ebp2      Eukaryotic rRNA processing protein EBP2


Domain annotation for each model (and alignments):
>> Ebp2  Eukaryotic rRNA processing protein EBP2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.8  20.3         1   1.8e+04     145     221 ..      14      89 ..       4     114 .. 0.54
   2 !  313.8  17.5   5.5e-98   9.9e-94       2     268 .]     117     376 ..     116     376 .. 0.95

  Alignments for each domain:
  == domain 1  score: -5.8 bits;  conditional E-value: 1
        Ebp2 145 gKqvqveklqeRqkeK...ketlekikklkkkrkkldfleeeeedefdvaleealkkkkkkkkkkkkgkknkk..rkakdkK 221
                  K v+ +kl  ++keK   k+  +k+k++k   +k+d+++ee e++  ++ +e++       +k k+++ + k   ++ +kK
  KHJ33807.1  14 EKAVDLKKLSIKKKEKasrKRKSSKVKDVKHDVNKSDNNDEEVEENEGIEEKEES------DEKIKEKTIDGKdeETNSNKK 89 
                 5888888888888888666777788888888666666655544443333332222......111122222222012222222 PP

  == domain 2  score: 313.8 bits;  conditional E-value: 5.5e-98
        Ebp2   2 edeelsalekgelkegedvvpekkkkltinnkeaLkekleeikl..kklpwvetldltsk.paeiedvedDlkRElaFykqaleavkearkrlkklgvp 97 
                 ed+++s+le+ + ++ ed++p+  ++ltinn+ aL+++l++i+l  ++l+++e++++t++ p++++dv+dDl+RElaFy q+l+avke+rk+lk +gvp
  KHJ33807.1 117 EDIPISDLEDIDHEDMEDLIPH--QRLTINNTVALTAALNRISLpiSELQFSEHQSVTTSePVSVPDVSDDLNRELAFYAQSLAAVKEGRKKLKLEGVP 213
                 89********************..***********************************99999*********************************** PP

        Ebp2  98 fkRPeDYFAEMvKsDehMekvkekLleeqaakkaseearkqRelkkfgKqvqveklqeRqkeKketlekikklkkkrkkldfleeeeedefdvaleeal 196
                 f+RP+DYFAEMvK DehM k+k+kL++e+a+kkas+earkqR+lkkfgKqvqv+klqeR+ke+k+tlekik lk+kr+  + ++e+e+d fdva++e++
  KHJ33807.1 214 FTRPNDYFAEMVKPDEHMTKIKSKLIDEAASKKASAEARKQRDLKKFGKQVQVAKLQERDKERKSTLEKIKVLKRKRQGITAENETEADIFDVAVDEEI 312
                 ********************************************************************************999999************* PP

        Ebp2 197 kkkkkkkkkkkkgkknkkrkakdkKfGfGGkkrgsKsndaessadvsgfsakkkkkkkgkkkkkkRpgksrR 268
                    k+ k++k+k++  +kr++kd+KfGfGG+k+++Ks+da ss d++gfs+kk      k+ +k+Rpg++rR
  KHJ33807.1 313 ---KSMKNSKDKSTGVRKRQKKDEKFGFGGRKKFKKSGDAFSSGDLKGFSSKKM-----KTVAKNRPGRARR 376
                 ...444444455566789**********************************94.....567899****998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2508  (0.139885); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                       101  (0.00563333); expected 17.9 (0.001)
Passed Fwd filter:                        32  (0.00178482); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.86u 0.32s 00:00:01.18 Elapsed: 00:00:00.51
# Mc/sec: 2254.03
//
Query:       KHJ33808.1  [L=179]
Description: hypothetical protein EV44_g0586 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       252  (0.0140554); expected 358.6 (0.02)
Passed bias filter:                      231  (0.0128842); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 1274.91
//
Query:       KHJ33809.1  [L=520]
Description: hypothetical protein EV44_g5054 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.17   11.9   0.9        1.5    8.9   0.0    2.6  3  DUF4329   Domain of unknown function (DUF4329)


Domain annotation for each model (and alignments):
>> DUF4329  Domain of unknown function (DUF4329)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1      0.59   1.1e+04      74      96 ..      22      46 ..      11      47 .. 0.66
   2 ?    0.2   0.0     0.041   7.3e+02      46      70 ..     279     303 ..     262     319 .. 0.73
   3 ?    8.9   0.0   8.2e-05       1.5      74     109 ..     449     485 ..     404     490 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 0.59
     DUF4329 74 e....vfsasDikivksdiqvgingYv 96
                +    +++ +D+  vk +++   n Yv
  KHJ33809.1 22 NssipFYELQDV--VKWSKNASENLYV 46
                133447888888..7777888888887 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.041
     DUF4329  46 sveakvpqgqtvvasyhtHgAydsn 70 
                 +++++ p + +  a+  tH A+d+ 
  KHJ33809.1 279 NFSEPPPYQSESSADHLTHQARDQT 303
                 23367778888889999****8874 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 8.2e-05
     DUF4329  74 e.vfsasDikivksdiqvgingYvatPsGrlekydps 109
                 +  +sasD+ i k++       Yva P ++l++ dps
  KHJ33809.1 449 KfTPSASDKPIKKNQSTQNYIKYVAIPMPELQNRDPS 485
                 158*****************************99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       901  (0.0502538); expected 358.6 (0.02)
Passed bias filter:                      584  (0.0325729); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.19s 00:00:00.78 Elapsed: 00:00:00.38
# Mc/sec: 4054.05
//
Query:       KHJ33810.1  [L=1180]
Description: putative stag domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-34  116.5   1.1    5.4e-34  116.5   1.1    3.3  3  STAG      STAG domain
     0.0013   18.7   4.7     0.0097   16.0   0.1    3.4  4  Cnd1      non-SMC mitotic condensation complex subunit 1
  ------ inclusion threshold ------
      0.019   15.3   0.0       0.31   11.5   0.1    2.6  2  HEAT_2    HEAT repeats


Domain annotation for each model (and alignments):
>> STAG  STAG domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.5   1.1   9.1e-38   5.4e-34       2     112 ..     206     317 ..     205     318 .. 0.96
   2 ?   -2.5   0.1      0.77   4.6e+03      78     100 ..     955     977 ..     945     980 .. 0.49
   3 ?   -4.8   1.7         3   1.8e+04      83     108 ..    1147    1172 ..    1143    1173 .. 0.62

  Alignments for each domain:
  == domain 1  score: 116.5 bits;  conditional E-value: 9.1e-38
        STAG   2 eYpliskkkklkkfrknlveFfeklvesahekglLy.deelmenlltwltalSssklRpfRhtaTlialklqtaLvevakelskeleklqrqleaekkk 99 
                 eYplis++k++++fr++l+ Ff+kl+e +he++ Ly ++ l+en+++w++alSss+ RpfRhtaTlial++++a +++a+   ++ +++qrqle+e+k 
  KHJ33810.1 206 EYPLISRAKSIQSFRSKLTGFFDKLIEVLHESEALYeETVLLENIHQWIAALSSSSTRPFRHTATLIALTMTSARCRIAHAEIEKGARVQRQLESEAKS 304
                 8***********************************5566**********************************************************9 PP

        STAG 100 kkankkrleelek 112
                 kk nk+rl+++++
  KHJ33810.1 305 KKPNKARLADFQR 317
                 9*******99875 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.77
        STAG  78 vakelskeleklqrqleaekkkk 100
                 v +el++   +l+rq ++++kkk
  KHJ33810.1 955 VQQELTSIFCDLERQFAKKAKKK 977
                 33333333334444444444443 PP

  == domain 3  score: -4.8 bits;  conditional E-value: 3
        STAG   83 skeleklqrqleaekkkkkankkrle 108 
                  ++  e+ +   e+e kk++++++++e
  KHJ33810.1 1147 EEVEENENENEENEGKKSEKSSDKVE 1172
                  44555666666777777777776665 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       1.7     1e+04     119     156 ..     145     181 ..     100     182 .. 0.70
   2 !   16.0   0.1   1.6e-06    0.0097      27     149 ..     424     552 ..     385     566 .. 0.75
   3 ?    3.2   0.2     0.014        84     111     159 ..     678     726 ..     627     729 .. 0.71
   4 ?   -4.1   0.0       2.5   1.5e+04      71      95 ..     941     965 ..     927     985 .. 0.54

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.7
        Cnd1 119 ilefLlsyipkdkqeaeslveklcprlqhansavvlaa 156
                   + L +y ++++q   +lv+ +  r + +n +v l +
  KHJ33810.1 145 AAQWLQKYREDNRQALADLVNLVL-RSSGCNIEVTLDD 181
                 456677888888887777776554.5566666666655 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 1.6e-06
        Cnd1  27 rkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteisek..se..naiy.nllpdiisklsd....alnecsewgq 116
                 + + +D++p VR  ++ +++ + +++m +  + ++++ +l+ D +prV++ +++++    +   ++  ++iy    ++ i+++sd    +   +s  ++
  KHJ33810.1 424 EMATRDSEPAVRSYTVELLTLIRDAGMLEPDD-IDDIGRLILDAEPRVRKTVVNFFISNVNDlfETrlQEIYgDEAQERIKNMSDediiDSPRVSWIKF 521
                 45679***********9999888888998888.******************999986555444532223333145566777777655554455888899 PP

        Cnd1 117 itilefLlsyipkdkqeaeslvekl.cprlqhan 149
                 +   e+L++y  +d++   ++++++ +pr+ ++n
  KHJ33810.1 522 KCLAEILVEYDGRDQE---DVLNRInIPRFLKVN 552
                 9999999999888877...666665467777666 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.014
        Cnd1 111 csewgqitilefLlsyipkdkqeaeslveklcprlqhansavvlaaikv 159
                 + + +q   ++f  + i++++++  +l++++c +++   +  vl+  ++
  KHJ33810.1 678 VLRLAQALDFKFFHDEIQQNSSNCSKLLDQICTQFKSHADTDVLTEASL 726
                 556666667788899999******************9999999988766 PP

  == domain 4  score: -4.1 bits;  conditional E-value: 2.5
        Cnd1  71 nprVvanalaalteiseksenaiyn 95 
                 +++++++++++ t+++++ ++++  
  KHJ33810.1 941 QEEISSLVKSISTDVQQELTSIFCD 965
                 3444444444444444443344444 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0   0.00065       3.9      11      86 ..     347     441 ..     341     442 .. 0.79
   2 ?   11.5   0.1   5.2e-05      0.31       4      52 ..     422     475 ..     419     478 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00065
      HEAT_2  11 dpdpevrraairaLg....rignp.......ealpaLvellededpavRraaaeaLgai......gd.....pealpaLkellddddddvvReaAaea 86 
                 d dp++r +  +aLg    +           ++l++L  +l d +  +R+a++  L +i      g      +++ + L e++++d+++ vR  ++e 
  KHJ33810.1 347 DIDPKIRLECTEALGtwivT---LdsyffdgQYLRYLGWMLYDIHGPIRQAIVIQLQKImktlnhGGirhfiDRFRSRLIEMATRDSEPAVRSYTVEL 441
                 679999999999**975552...2333555588***********************999655555213347799******************998875 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 5.2e-05
      HEAT_2   4 LlqalendpdpevrraairaLgrignp.....ealpaLvellededpavRraaa 52 
                 L++ +++d++p+vr  +++ L  i++      + ++ + +l+ d++p+vR++++
  KHJ33810.1 422 LIEMATRDSEPAVRSYTVELLTLIRDAgmlepDDIDDIGRLILDAEPRVRKTVV 475
                 8999999***************666552222266*****************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1525  (0.0850577); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.89u 0.28s 00:00:01.17 Elapsed: 00:00:00.46
# Mc/sec: 7738.14
//
Query:       KHJ33811.1  [L=102]
Description: putative sucrose transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 771.79
//
Query:       KHJ33812.1  [L=289]
Description: hypothetical protein EV44_g3241 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.2e-18   65.7   0.7    5.3e-18   65.0   0.7    1.4  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type
     0.0012   19.1   1.8     0.0024   18.1   0.8    2.0  2  Retrotrans_gag   Retrotransposon gag protein
  ------ inclusion threshold ------
       0.16   12.6   0.2       0.16   12.6   0.2    2.3  2  mRNA_cap_C       mRNA capping enzyme, C-terminal domain


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.0   0.7   8.8e-22   5.3e-18       1     137 [.      72     220 ..      72     221 .. 0.96

  Alignments for each domain:
  == domain 1  score: 65.0 bits;  conditional E-value: 8.8e-22
  Retrotran_gag_2   1 wkkkdakalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsa........... 83 
                      wk  +++ +++I++++++ l + v++++take+Wd +k+ y +++  + + l+k  ++l +k+g++++d+++ +++ +n+L++           
       KHJ33812.1  72 WKNANKQLRGAILNAVDETLQTVVIDHQTAKEAWDQFKSRYDRETSNSTIDLLKSITNLSLKDGDDISDYLTLFNDSWNRLRNqsssaktplak 165
                      9999****************************************************************************************** PP

  Retrotran_gag_2  84 ..lgvkiddedkvvllLasLPesyetfvtaiesseedltleevieklleeeerrke 137
                         + + +++ k + lL+sLP+s +++v++  + +e +++ +v +kll+ + +rk+
       KHJ33812.1 166 afQDLTSSEDAKGAFLLSSLPKSMKNVVDNPVT-KELVSYGDVSAKLLDVSVNRKS 220
                      9999999************************99.9999999999999998887775 PP

>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.3      0.04   2.4e+02      25      72 ..      68     110 ..      60     113 .. 0.66
   2 !   18.1   0.8   3.9e-07    0.0024      20      81 ..      92     157 ..      73     173 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.04
  Retrotrans_gag  25 asesWkdlkkaflktflpserkdqleeelsslrQgtesvreYvtrfkt 72 
                     ++++Wk+ +k+++   l+     + +e l+++  ++++ +e++++fk+
      KHJ33812.1  68 NFKIWKNANKQLRGAILN-----AVDETLQTVVIDHQTAKEAWDQFKS 110
                     377888888888877777.....5555566666667777777777775 PP

  == domain 2  score: 18.1 bits;  conditional E-value: 3.9e-07
  Retrotrans_gag  20 arsida....sesWkdlkkaflktflpserkdqleeelsslrQ.gtesvreYvtrfktladqlde.vl 81 
                     ++ + +     e W+++k+++ ++  + ++ d+l++ + +l+  +   +++Y+t f+  +++l++ ++
      KHJ33812.1  92 QTVVIDhqtaKEAWDQFKSRYDRETSN-STIDLLKS-ITNLSLkDGDDISDYLTLFNDSWNRLRNqSS 157
                     4333334555899************99.9******9.******99*******************8433 PP

>> mRNA_cap_C  mRNA capping enzyme, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.2   2.7e-05      0.16      33      88 ..      64     120 ..      32     135 .. 0.65
   2 ?    0.3   0.4      0.18   1.1e+03      23      46 ..     244     267 ..     179     284 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.7e-05
                 EEEEEB---HH...HH..HHHHHT-S--TTEEEEEEE-TTS-EEEEEE-TT-SS--BH CS
  mRNA_cap_C  33 ekfaelylseeekeew..eelkslneeldgkIvEcsldeekrWkllriRdDKsepNhi 88 
                 ++ +++ + ++ ++++    l++++e l+  ++  +  +e +W   + R+D+++ N++
  KHJ33812.1  64 QSSENFKIWKNANKQLrgAILNAVDETLQTVVIDHQTAKE-AWDQFKSRYDRETSNST 120
                 3333333333333444335555555667776777777766.7**************74 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.18
                 EEEEEESTEEEEEEEB---HH... CS
  mRNA_cap_C  23 ellvlegekyekfaelylseeeke 46 
                 + + +eg+ ++++++l  s+++k+
  KHJ33812.1 244 RKYRFEGHLDTEYRKLKASQQKKK 267
                 233333344444444444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1402  (0.0781973); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.21s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2136.60
//
Query:       KHJ33813.1  [L=79]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (79 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       784  (0.043728); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 581.95
//
Query:       KHJ33814.1  [L=1034]
Description: putative peptidase m16 inactive domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-80  270.1   4.5      2e-80  270.1   4.5    2.0  2  Peptidase_M16_M  Middle or third domain of peptidase_M16
    2.7e-30  105.3   2.0      4e-30  104.8   0.1    2.3  2  Peptidase_M16    Insulinase (Peptidase family M16)
    1.1e-25   90.7   0.2    2.7e-15   56.9   0.0    3.0  3  Peptidase_M16_C  Peptidase M16 inactive domain
  ------ inclusion threshold ------
      0.073   12.4   2.6       0.13   11.6   2.6    1.4  1  YPEB             YpeB sporulation
      0.084   12.7   0.3       0.58   10.0   0.5    2.3  2  RPAP1_N          RPAP1-like, N-terminal


Domain annotation for each model (and alignments):
>> Peptidase_M16_M  Middle or third domain of peptidase_M16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  270.1   4.5   5.6e-84     2e-80       1     277 [.     405     692 ..     405     693 .. 0.96
   2 ?   -1.8   0.4      0.41   1.5e+03     211     264 ..     842     900 ..     829     913 .. 0.66

  Alignments for each domain:
  == domain 1  score: 270.1 bits;  conditional E-value: 5.6e-84
  Peptidase_M16_M   1 FrFkekeepsdyvsslaenmqk.yppedvlsgpylleeydpelikellssLtpenarivlvske...t.dekekwygteYsvekiseelleewk 89 
                      F+++ek ++++y+s +++ +q+ +p+e+++s  y+++++dp+ ik++ls L+p+n+ri+l+ ++   + d+kekwyg+eY++++is+++l+e+k
       KHJ33814.1 405 FNYNEKWPAIKYTSLMSQILQTpVPREWLISNRYIVQKFDPDIIKTYLSFLRPDNFRIILTTQKfdgKwDRKEKWYGAEYTFKNISDSFLSEIK 498
                      9**************************************************************7765377************************ PP

  Peptidase_M16_M  90 sae......eneeLhLPepNpFiptdfslkkesesepakaPelirdtelvrlWykkDdtFkvPkasvrlklrsplasksprnavltelfvellk 177
                      +a       + +eLh+P++N+Fip++++++ +s +e +  P++i +++l+r+W+kkDd+F+vPk+sv + +rs +++++p++++ + ++++l++
       KHJ33814.1 499 TAYnstakeRLPELHMPQKNQFIPKNLNVEIKSIKEVSLSPKIICENDLLRVWHKKDDQFWVPKGSVIIYFRSLITHATPETYLKSLIYAHLVE 592
                      663367788999*****************85545599********************************************************* PP

  Peptidase_M16_M 178 dslneylydAelAglsyslssskeglelsvsGYndklpvLlekvleklknfeikedrFevikekllrelknfklekpyqqarellsslleekaw 271
                      d+ ++y+ydA  Agl+y+++  + g+++s+ GYndkl+ Llek+l ++kn+++k++rFevi e+++r++kn  +++py  + +++s l  ek++
       KHJ33814.1 593 DTSEDYSYDAANAGLHYTIKIISGGIQVSIAGYNDKLSSLLEKLLLTMKNLKVKQERFEVIMERMIRDYKNRAFSEPYLRIGKYVSALNVEKSY 686
                      ********************************************************************************************** PP

  Peptidase_M16_M 272 tleell 277
                        eell
       KHJ33814.1 687 LDEELL 692
                      *99987 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.41
  Peptidase_M16_M 211 ndklpvLlekvleklknf......eikedrFevikekllrelknfklekpyqqarellss 264
                      ++k   +le+ +e++ ++      +++e++Fe  k +l+  l++ kle+  + ++ +  +
       KHJ33814.1 842 SEKTTSFLESRIESFLSSfaktlqNMSETEFEENKRSLITILSK-KLETLNEEMKRMHYH 900
                      56666777766666664235556678888888888888877777.666666655555544 PP

>> Peptidase_M16  Insulinase (Peptidase family M16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.8   0.1   1.1e-33     4e-30       2     148 ..      46     193 ..      45     194 .. 0.98
   2 ?   -1.7   0.3      0.72   2.6e+03      75     111 ..     836     878 ..     828     913 .. 0.54

  Alignments for each domain:
  == domain 1  score: 104.8 bits;  conditional E-value: 1.1e-33
                    EEEEE-TSSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSCH.HHHHHHHHHTTCEEEEEEESSEEEEEEEEEGGG...........HH CS
  Peptidase_M16   2 valesdppaktsavglvvdaGSryepkdlnGlAHllehmafkgTkkyps.nklaeeleklGgslnAttsrentvYyvevlskd...........le 85 
                    v+l++d++++++++ + v aG   +++d++G+AH +eh++f+gTkkyp+ n++ ++++++ g++nA t  + t Y+++v++++           + 
     KHJ33814.1  46 VVLIHDNETDKASACMDVRAGYYCDDEDMPGMAHAVEHLLFMGTKKYPEeNAYSQYINNHSGQSNAWTMSQSTHYFFDVAAEKstnasddepspFY 141
                    8999999***************************************************************************************** PP

                    HHHHHHHHHHHSBTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTTTSGGGSHSS-T CS
  Peptidase_M16  86 kaldvladvfkaplleesevererkvvekeveavdaepekvveenlhaaayrekalgrsllgp 148
                    +ald++a++f +pl+ +s+v+r       e+ avd+e+     +nl+++a+r ++ ++ l++p
     KHJ33814.1 142 GALDRFAQFFCEPLFLSSTVDR-------ELLAVDSEH----KKNLQNDAWRSRKIESLLSNP 193
                    **********************.......*********....**********99999998888 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.72
                    EEEEEEGGG....HHHHHHHHHHHHHSB..TTSHHHHHHHHHH CS
  Peptidase_M16  75 Yyvevlskd....lekaldvladvfkap..lleesevererkv 111
                    + ++v+s++    le+ ++ + + f+++   ++e e+e+++ +
     KHJ33814.1 836 FRFTVQSEKttsfLESRIESFLSSFAKTlqNMSETEFEENKRS 878
                    5555555554455455555555555554344556666654442 PP

>> Peptidase_M16_C  Peptidase M16 inactive domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.9   0.0   7.4e-19   2.7e-15       4     174 ..     220     392 ..     218     398 .. 0.87
   2 ?   -3.9   0.0       3.4   1.2e+04      22      48 ..     620     644 ..     617     655 .. 0.75
   3 !   30.6   0.0   8.5e-11     3e-07       2     183 .]     698     879 ..     698     879 .. 0.73

  Alignments for each domain:
  == domain 1  score: 56.9 bits;  conditional E-value: 7.4e-19
                      HHHHHHHHHHHSSGGGEEEEEEESS-HHHHHHHHHHHHTTSTHHSH..CSGSCTSSSSSGGGSSEEEEEEEESSSSSEEEEEEEEEECTCTHTT CS
  Peptidase_M16_C   4 redlkefykkfYrpenmvlaivGdvdheelvkliekyfgdlkaska..ppakptgepltpatlkkppvvlkkldeeqahlslafegpskended 95 
                      r+++ efy+k+Y++++m+l + G+ + ++l++++ ++f+++++++   +  + + ++++  +l  + ++++ +d  ++h++l f++ ++e  ++
       KHJ33814.1 220 RQKFIEFYEKHYSANRMKLTVLGKEPLDTLEEWVANFFSSIPNKDLerNAWEEPLFRKE--DLLIECFIKPIKD--FNHIYLQFPAINTELLYE 309
                      7999**************************************99866333333344444..7888888888888..****************** PP

                      HHHHHHHHHHHHSSTTSHHHHHHHTTTTSESEEEEE.EEEES..SCEEEEEEEEEECT...THHHHHHHHHHHHHHHHHHTS-HH CS
  Peptidase_M16_C  96 dlalavlntlLgggmesrLytnlrekeglaysvsaf.ndsyr..dsglfgisatadpe...nveevvevilkelrklkkegltee 174
                        + ++l++l+ +   ++L +  + ++g++  ++a+ ++        lf   + ++ +   n+ e+++ i++++  l +++++++
       KHJ33814.1 310 TCPENYLSYLFDHQGPGSLTSYFK-NKGWVIKIEAGgQRV-CpgTPDLFNCWLNLTEDgihNYREIIKIIFQYISLLNETEPQKW 392
                      ************************.***********5444.2688899999999999999999*********9999988877666 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 3.4
                      EEEEESS-HHHHHHHHHHHHTTSTHHS CS
  Peptidase_M16_C  22 laivGdvdheelvkliekyfgdlkask 48 
                      ++i+G   +++l +l+ek++ ++k+ k
       KHJ33814.1 620 VSIAG--YNDKLSSLLEKLLLTMKNLK 644
                      67777..56689999999999999764 PP

  == domain 3  score: 30.6 bits;  conditional E-value: 8.5e-11
                      H-HHHHHHHHHHHSSGGGEEEEEEESS-HHHHH...HHHHHHHTTSTHHSHCSGSCTSSSSSGGGSSEEEEEEEESSS.SSEEEEEEEEEECTC CS
  Peptidase_M16_C   2 ltredlkefykkfYrpenmvlaivGdvdheelv...kliekyfgdlkaskappakptgepltpatlkkppvvlkklde.eqahlslafegpske 91 
                      +t +d+  f+ +++ + +++ +++G++  e+++   +++e++++  + sk   + +++ +++p      p+  k+ d  ++++++  f+g s  
       KHJ33814.1 698 ITSKDIEIFFPQIFAQMHIEMFVHGNFYKEDALiisDMVERTLKPRPLSKSCWEIYRSTFYPPGCSYLYPITSKDPDNiNNCIAYQLFIGDSN- 790
                      678899999******************999766222666677777777666334445555555444555555666665477777777777777. PP

                      THTTHHHHHHHHHHHHSSTTSHHHHHHHTTTTSESEEEEE.EEEESSCEEEEEEEEEECTTHHH....HHHHHHHHHHHHHHHTS-HHHHHHHH CS
  Peptidase_M16_C  92 ndeddlalavlntlLgggmesrLytnlrekeglaysvsaf.ndsyrdsglfgisatadpenvee....vvevilkelrklkkeglteeelerak 180
                        +   +  +l +++ +      +++lr++e+l+y vs++ ++   + + +++ +t+++e++      ++e +l+ ++k  ++ ++e e+e+ k
       KHJ33814.1 791 IRTLGSKTLLLDQIIKEP----VFNQLRTNEQLGYIVSSDpFV---GVNTISFRFTVQSEKTTSflesRIESFLSSFAKTLQN-MSETEFEENK 876
                      555555555666666666....******************555...4578888888888844444445***************.*********9 PP

                      HHH CS
  Peptidase_M16_C 181 nql 183
                      + l
       KHJ33814.1 877 RSL 879
                      976 PP

>> YPEB  YpeB sporulation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   2.6   3.6e-05      0.13      84     182 ..     841     942 ..     838    1003 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.6e-05
        YPEB  84 elsktekFL.sqvgdfsyslak..kdldgepLteeeyktLeeLyeqakelekeLrkvqekvaegglrwgelekalaseqekadntiidgnfktvekeve 179
                 + +kt+ FL s+++ f  s ak  +++++++ +e++++ ++ L ++ ++l++e++ ++  + ++++ ++ ++k++a+ +  +++++id   + ++   +
  KHJ33814.1 841 QSEKTTSFLeSRIESFLSSFAKtlQNMSETEFEENKRSLITILSKKLETLNEEMKRMHYHIFSERYDFELAKKEVAEIKILTKSAMIDYYQHFIDPASQ 939
                 6789999995578888777776335677889********************************************998888888888876666666665 PP

        YPEB 180 kyp 182
                 + +
  KHJ33814.1 940 SRS 942
                 555 PP

>> RPAP1_N  RPAP1-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.72   2.6e+03      26      36 ..     439     449 ..     436     450 .. 0.84
   2 ?   10.0   0.5   0.00016      0.58       9      34 ..     862     887 ..     861     888 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.72
     RPAP1_N  26 LlesLdPklle 36 
                 + +++dP++++
  KHJ33814.1 439 IVQKFDPDIIK 449
                 889*****996 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00016
     RPAP1_N   9 arLasMspeEIeeereeLlesLdPkl 34 
                 + L++Ms+ E ee ++ L   L  kl
  KHJ33814.1 862 KTLQNMSETEFEENKRSLITILSKKL 887
                 68****************99998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1034 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1019  (0.0568353); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.80u 0.25s 00:00:01.05 Elapsed: 00:00:00.44
# Mc/sec: 7090.03
//
Query:       KHJ33815.1  [L=143]
Description: putative upf0047 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-38  129.9   0.0    5.4e-38  129.7   0.0    1.0  1  UPF0047   Uncharacterised protein family UPF0047


Domain annotation for each model (and alignments):
>> UPF0047  Uncharacterised protein family UPF0047
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.7   0.0     3e-42   5.4e-38       2     114 ..      19     137 ..      18     138 .. 0.94

  Alignments for each domain:
  == domain 1  score: 129.7 bits;  conditional E-value: 3e-42
                 -HHHHHHHHHH.HT.SEEEEEEEESSSSEEEEEEESSSHHHHHHHHHHHHHHSTTT....T-GGGTTS..THHHHHHHHHH-SEEEEEEETTEE---TT CS
     UPF0047   2 iteeveeavke.sgvkeGlvlvfsrhttasltinEnadpdvqeDleealeklvpee....eYrhnaegpdnadaHlkssllgssltipvedgklalGtw 95 
                 it+ +++ + e +++k Gl+++f++ht+++l +nEn+d+dv++D+++al+++vpe+     Yrh+aeg d+++aH+ks+l+g+sl+ip++dg lalGtw
  KHJ33815.1  19 ITSIIQKEIPEvKSCKIGLLNLFIQHTSCALSLNENWDEDVRADMSDALDRIVPEDneggLYRHDAEGADDMPAHIKSALIGASLNIPIRDGALALGTW 117
                 89999999888799*****************************************99999*************************************** PP

                 EEEEEEESS-SSE.EEEEEE CS
     UPF0047  96 qsiylveldgpre.Rkvvvq 114
                 q+i+++e+   r+ Rkvv++
  KHJ33815.1 118 QGIWYLEFRAMRHqRKVVAT 137
                 ********955555*99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       266  (0.0148363); expected 358.6 (0.02)
Passed bias filter:                      251  (0.0139997); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 1113.86
//
Query:       KHJ33816.1  [L=99]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.19s 00:00:00.58 Elapsed: 00:00:00.36
# Mc/sec: 826.06
//
Query:       KHJ33817.1  [L=953]
Description: hypothetical protein EV44_g2972 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.31   11.4   3.2       0.71   10.2   3.2    1.6  1  EGF       EGF-like domain


Domain annotation for each model (and alignments):
>> EGF  EGF-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.2     4e-05      0.71       1      32 []     558     592 ..     558     592 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 4e-05
                 GCSTT...STTT-EEEEETTTEEEEEECTTEESTT CS
         EGF   1 Cspnp...CsngGtCvdtgrggytCiCpeGytGkr 32 
                 C+ n+   C+ngG  + +++ +  CiC++G+tG++
  KHJ33817.1 558 CATNKisrCQNGGSSFLLEDKTCACICTNGFTGNT 592
                 88888888999997666669999**********86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (953 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       946  (0.0527637); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.28s 00:00:01.00 Elapsed: 00:00:00.44
# Mc/sec: 6559.48
//
Query:       KHJ33818.1  [L=635]
Description: putative carbon catabolite repression protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-13   49.9   0.1    3.9e-12   46.8   0.1    2.3  2  Arrestin_C  Arrestin (or S-antigen), C-terminal domain
    1.7e-09   37.9   0.0    2.8e-09   37.2   0.0    1.4  1  Arrestin_N  Arrestin (or S-antigen), N-terminal domain
    0.00015   21.6   0.0    0.00031   20.5   0.0    1.5  1  LDB19       Arrestin_N terminal like


Domain annotation for each model (and alignments):
>> Arrestin_C  Arrestin (or S-antigen), C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.15   9.2e+02      72     117 ..     114     158 ..      48     172 .. 0.71
   2 !   46.8   0.1   6.6e-16   3.9e-12       1     133 [.     191     342 ..     191     343 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.15
                 B-TTEE.EEEEEEE.----B-----S---EEEEEEEEEEEEEEESS CS
  Arrestin_C  72 tsaakdkletevelqiPeeltpssarnvelikvsYklkvkltlsgs 117
                 t   ++++e  +el iP ++++s +   +  ++ Y lk k+  ++ 
  KHJ33818.1 114 TIMHSGNYEWPFELIIPGSIAESVQ-GIRETYIVYNLKAKVARGKL 158
                 3345556666699999999999996.88889999999999876654 PP

  == domain 2  score: 46.8 bits;  conditional E-value: 6.6e-16
                 ----EEEEEEES-SEEETT--EEEEEEEE.E-SSSEEEEEEEEEEEEEEEESS..........SEEEEEEEEEEEEE---..............B-TTE CS
  Arrestin_C   1 wdgkvsleaslpkkgyvpGetipvtvkid.ndskkkvkkikvslvqhvdvcafnr........snkkeknvvaksdsvkv..............tsaak 76 
                 w++k+++++ +p+k +++G +++v++ ++  ++++++ +i++ + + v+  +  +        +  k ++ va                       + +
  KHJ33818.1 191 WPNKIEYSVMVPQKTVIFGTAVEVQMRFTvLLKGLRIGEIRCHILEIVELSSGLPsrseiekcR--KHERRVA------MstfsmneenyheilLDNGQ 281
                 99***************************99*********************998777777542..2222222......12222223558888844445 PP

                 E.EEEEEEE.----B--...---S---EEEEEEEEEEEEEEE...SSEEEEEEEEEEEEEB-- CS
  Arrestin_C  77 dkletevelqiPeeltp...ssarnvelikvsYklkvkltls...gsggelslelPivlgsvp 133
                 d   +  ++ +P+ l +   ++  +v +i+v++++k+ +tl    g+ +el++++Pi+++ +p
  KHJ33818.1 282 DGHVLIEKIPLPKTLSEclqDC--DVHGIRVRHRVKFFITLHnpdGHVSELRATIPITIYFSP 342
                 5555557778887777788799..9*****************9875888**********9887 PP

>> Arrestin_N  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.0   4.7e-13   2.8e-09      14     127 ..      38     157 ..      19     176 .. 0.79

  Alignments for each domain:
  == domain 1  score: 37.2 bits;  conditional E-value: 4.7e-13
                 TT--EEEEEEE-CCCCTT.CEEEEEEEEEEEESSSSTTTTCCCEEEEEEEEEEEEESTSSSSS.SSSSHHHHH.....HHH-TTEEEEEE---TTS--S CS
  Arrestin_N  14 pgetvdGkvlleteelkkarkvkielsgkartgweesevagktfrkdltlkkkqeyleteksllkskkdsqek.....LpkGehafpFsfelPknlpsS 107
                 p +  +G+v+l+  +++k+++v++++sg+ + +    ++++  ++++ +++++ e+++++ + +   ++s+++     + +G++++pF + +P +++ S
  KHJ33818.1  38 PSQLMTGVVVLSLYQTIKVEEVYLRMSGQLKISGLPDKKQNFESENKIHIERQCEIFSHTWPSFVGGHGSESSskgtiMHSGNYEWPFELIIPGSIAES 136
                 56999**************************99998888888888888888886666666665543333333334556667****************** PP

                 ECS.GEEEEEEEEEEEEECCC CS
  Arrestin_N 108 feG.kaggvrYevkvtldrpw 127
                 ++G +  ++ Y +k+ ++r +
  KHJ33818.1 137 VQGiRETYIVYNLKAKVARGK 157
                 *9956799********99976 PP

>> LDB19  Arrestin_N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   5.1e-08   0.00031      45      88 ..     114     155 ..     107     211 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 5.1e-08
       LDB19  45 kdlkvGsysyPfsylipGslpassslgsnaetkvkyeliavvvy 88 
                 + +++G+y++Pf  +ipGs+  s++    +et + y+l a v+ 
  KHJ33818.1 114 TIMHSGNYEWPFELIIPGSIAESVQ--GIRETYIVYNLKAKVAR 155
                 5589*******************99..789**********9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (635 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 4717.41
//
Query:       KHJ33819.1  [L=909]
Description: putative chitin synthase g [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.7e-69  231.9   0.0    5.2e-69  231.4   0.0    1.2  1  Chitin_synth_1   Chitin synthase
      1e-27   95.9   0.0    1.8e-27   95.1   0.0    1.4  1  Chitin_synth_1N  Chitin synthase N-terminal
    3.4e-22   78.8   0.0      2e-18   66.3   0.0    2.3  2  Chitin_synth_2   Chitin synthase
    2.1e-09   37.6   0.1    2.1e-09   37.6   0.1    2.7  3  Glyco_trans_2_3  Glycosyl transferase family group 2


Domain annotation for each model (and alignments):
>> Chitin_synth_1  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.4   0.0   1.2e-72   5.2e-69       1     163 []     218     386 ..     218     386 .. 0.93

  Alignments for each domain:
  == domain 1  score: 231.4 bits;  conditional E-value: 1.2e-72
  Chitin_synth_1   1 mynEdkellarTLkgvmkNieelkkrkkskvwgkds..WkkivVcivsDGrekideetldvlaalgvyqegvakkkvngkevkahlfeyttqlsv 93 
                     +ynEdk+l arTL+gvm+Ni+++++ kks++w+  +  W+kivVc+v+DG++++d++tldvla++g+yq+gv+kk+v+gke++ah+feyttqlsv
      KHJ33819.1 218 YYNEDKSLTARTLHGVMTNIRDIVNLKKSDFWNVGGpaWQKIVVCLVFDGIDPCDKDTLDVLATIGIYQDGVMKKDVDGKETVAHIFEYTTQLSV 312
                     7*******************************976666********************************************************* PP

  Chitin_synth_1  94 de....elklkenekslvpvqllfclkeknakkinShrWlfnafarllqPevcvlldvGtkpgkkslyklwkaf 163
                     +        +++++++l pvq++fclk+kn+kkinShrWlfnaf+rll+Pevc+lld+Gt+pg+ksl+ lw+ f
      KHJ33819.1 313 TAnqqlIRPTDDSSNTLPPVQMMFCLKQKNSKKINSHRWLFNAFGRLLNPEVCILLDAGTRPGTKSLLALWEGF 386
                     553343334445558899*****************************************************976 PP

>> Chitin_synth_1N  Chitin synthase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.1   0.0     4e-31   1.8e-27       1      73 []     137     217 ..     137     217 .. 0.90

  Alignments for each domain:
  == domain 1  score: 95.1 bits;  conditional E-value: 4e-31
  Chitin_synth_1N   1 tkkvkLlngnlvl.dlpvpkkllkalp...eeeke.....seEfthmRYtAvTcdPddft.kegytLRqalygReteLlIviT 73 
                      t+kvkL++g ++  d+pvp+++++a++   ++  +     seEft+mRYtA+TcdPd+ft k+gy+LR+a+y+R+teLlI+iT
       KHJ33819.1 137 TRKVKLVQGTVLSvDHPVPSAIKNAVQakyRQ--DlegggSEEFTTMRYTAATCDPDEFTlKNGYNLRPAMYNRHTELLIAIT 217
                      69*******98766*************76533..234577******************************************9 PP

>> Chitin_synth_2  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.3   0.0   4.5e-22     2e-18     203     375 ..     363     541 ..     354     600 .. 0.84
   2 !    9.7   0.2   6.3e-05      0.28     432     492 ..     709     768 ..     691     788 .. 0.83

  Alignments for each domain:
  == domain 1  score: 66.3 bits;  conditional E-value: 4.5e-22
  Chitin_synth_2 203 eivlmvdadtkvapdsltrlvaalvkdpeilglcGetkian.k..kesw..vtaiqvfeyyishhlskafesvfGsvtclPGcfslyrikaakga 292
                     e+++++da t+  + sl  l   + +d+ + g cGe +    k  ++ +  + a q fey is  l k +es fG v+ lPG fs+yr +a  g 
      KHJ33819.1 363 EVCILLDAGTRPGTKSLLALWEGFYNDKDLGGACGEIHAMLgKggRKLFnpLVAAQNFEYKISNILDKPLESSFGYVSVLPGAFSAYRFRAIMG- 456
                     8899********************************8754312112333226788************************************999. PP

  Chitin_synth_2 293 dgkwvPil.vspeiveeysenvvdtl..hkknllllGedrylt.tlllktfpkrktvfvpqakcktvaPdtfkvllsqrrrwinstv 375
                        +   +  ++ + ++  ++ ++ +   kkn+ +l edr l   l+ k  +k + ++++ ak +t +P+    ++ qrrrw+n + 
      KHJ33819.1 457 -RPLEQYFhGDHTLSKKLGKKGIEGMniFKKNM-FLAEDRILCfELVAKAGSKWHLTYIKAAKGETDVPEGAAEFIGQRRRWLNGSF 541
                     .33444440556667778888888652268886.689****98469999***********************************765 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 6.3e-05
  Chitin_synth_2 432 viplvllaivlGlpailivltarkleyvawllvyllalPifnfvlPlyafwhlddfswGet 492
                     +i ++ll + +Gl  +   +    +++++ +  yll +  +  +l +yaf +  d swG  
      KHJ33819.1 709 IIIIALL-ATFGLYFVASFMYLDPWHMITSFGQYLLLMSSYINILMVYAFSNWHDVSWGTK 768
                     3444444.568999999999999************************************75 PP

>> Glyco_trans_2_3  Glycosyl transferase family group 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.1   4.7e-13   2.1e-09       3     194 ..     366     593 ..     364     603 .. 0.75
   2 ?   -2.8   0.6       1.1   4.9e+03     194     194 ..     644     644 ..     605     682 .. 0.48
   3 ?   -2.8   2.2       1.1   4.9e+03     153     190 ..     712     753 ..     695     759 .. 0.47

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 4.7e-13
  Glyco_trans_2_3   3 lllDaDtvlppdclreiaaela.spevaivqgpvlvm...nvanwleelaalf...faedhgkdilvrealgrvvpsvGsgaflrrsalq.... 85 
                      +llDa t++   +l+ + + +  + + + ++g + +m   ++++++  l a+    ++++ + d +  +++g v  ++G+ ++ r +a+     
       KHJ33819.1 366 ILLDAGTRPGTKSLLALWEGFYnDKDLGGACGEIHAMlgkGGRKLFNPLVAAQnfeYKISNILDKPLESSFGYVSVLPGAFSAYRFRAIMgrpl 459
                      799************99995554899**********998756666655555544449********************************99999 PP

  Glyco_trans_2_3  86 ............evg........gwdgdessvsEDfdmglrl.qrkG..yrvrfvpeslvkekspltlraalrQrkRwayGc..eleklillvr 154
                                  ++g         ++ ++ +++ED  +++ l +++G  +++ ++ ++   + +p     ++ Qr+Rw+ G    +++ i+ + 
       KHJ33819.1 460 eqyfhgdhtlskKLGkkgiegmnIFK-KNMFLAEDRILCFELvAKAGskWHLTYIKAAKGETDVPEGAAEFIGQRRRWLNGSfaASMYSIMHFG 552
                      88888888777744477667666555.467************44666778888999999**********************7543377776664 PP

  Glyco_trans_2_3 155 llgylgsllwsalplhl.allllfsllalalvlllllllaa 194
                      ++   g+ l+  ++lh+ +l+ +fs++  +++l  ++l+ +
       KHJ33819.1 553 RMYKSGHNLVRMFFLHVqLLYNMFSVFLSWFMLASFWLTTT 593
                      44444555555555555345555555554444444444443 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.1
  Glyco_trans_2_3 194 a 194
                      a
       KHJ33819.1 644 A 644
                      1 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1.1
  Glyco_trans_2_3 153 vrllgylgsllwsalp....lhlallllfsllalalvlllll 190
                      + ll+ +g++++++++    +h++ ++ ++ll ++ ++++l+
       KHJ33819.1 712 IALLATFGLYFVASFMyldpWHMITSFGQYLLLMSSYINILM 753
                      334444444444444311114444444444333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (909 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       533  (0.0297284); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.69u 0.26s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 6190.92
//
Query:       KHJ33820.1  [L=387]
Description: putative altered inheritance of mitochondria protein mitochondrial [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.1e-73  245.5   0.0    5.6e-73  245.1   0.0    1.2  1  Chalcone_2  Chalcone isomerase like
     0.0022   18.1   0.1       0.83    9.7   0.4    2.3  2  Chalcone_3  Chalcone isomerase-like


Domain annotation for each model (and alignments):
>> Chalcone_2  Chalcone isomerase like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  245.1   0.0   6.3e-77   5.6e-73       1     204 []     169     367 ..     169     367 .. 0.98

  Alignments for each domain:
  == domain 1  score: 245.1 bits;  conditional E-value: 6.3e-77
  Chalcone_2   1 eeytLlGlGvRtVsflsiqVYvvGlYvaksdiaklqkvlqskllskkviattlvssekeelkkalldpekseelweellde.girtavrivPvrnTdfs 98 
                 ++y LlGlG+RtVsfl+iqVYvvG+Yva +di klq+ l ++   +++ attl+ +ek+el+++l++pe++e++w+++l+e g+r+++rivP+rnTdf+
  KHJ33820.1 169 TKYYLLGLGTRTVSFLKIQVYVVGVYVAAEDIVKLQNNLIKR---VNPQATTLILNEKDELRSMLNNPEQNEQIWDTILKEgGCRMLIRIVPTRNTDFG 264
                 689************************************999...88999*****************************9846**************** PP

  Chalcone_2  99 hLrDGfvraitarakkkkeeeedeefgeslkefkslFnrkgsvpkgkeLlLerdangeLsvlyedkkkkkleklGrvedervsrllwlnYLagkkvase 197
                 hLrD++vr++++ra+k+  e +de+fge +  fk++F+r g++pkg+eL+L+r + g+L+v+y+++++++l klG+v+dervsr++wl YLagk va+e
  KHJ33820.1 265 HLRDAWVRSMKSRAQKA--EWNDEKFGENVALFKRIFAR-GNIPKGTELILSRGSLGNLEVWYHGQSTSRLDKLGEVRDERVSRAVWLGYLAGKGVACE 360
                 *****************..8******************9.*********************************************************** PP

  Chalcone_2 198 earksvv 204
                 +ar+++v
  KHJ33820.1 361 GAREEIV 367
                 ****997 PP

>> Chalcone_3  Chalcone isomerase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.4   9.3e-05      0.83      19      45 ..     170     198 ..     157     236 .. 0.80
   2 !    5.9   0.0    0.0014        13      50     134 ..     241     330 ..     230     357 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 9.3e-05
  Chalcone_3  19 eLkLnGaGlRskfffk..vYvagLYlpek 45 
                 +  L G+G+R++ f+k  vYv+g Y++++
  KHJ33820.1 170 KYYLLGLGTRTVSFLKiqVYVVGVYVAAE 198
                 55689*****999987669******9875 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0014
  Chalcone_3  50 eailaaeekairleils.rdvsseklkkaleegfekntae...elaelkariekfkalfak.evkkgdvitldylpgkgvvvvvngkqlg 134
                 ++il++ + ++ ++i+  r+ +   l +a+ + ++  +++   + +++ ++++ fk++fa+ ++ kg+++ l+      ++v++ g+ + 
  KHJ33820.1 241 DTILKEGGCRMLIRIVPtRNTDFGHLRDAWVRSMKSRAQKaewNDEKFGENVALFKRIFARgNIPKGTELILSRGSLGNLEVWYHGQSTS 330
                 5666666667777787657799999*********985433112577899**********8659*******99998888899998887643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (387 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 3056.81
//
Query:       KHJ33821.1  [L=310]
Description: putative protein dsf2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.4e-16   58.1   1.7    0.00011   22.7   0.1    3.6  4  Sel1      Sel1 repeat


Domain annotation for each model (and alignments):
>> Sel1  Sel1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0         1   1.8e+04      22      30 ..     127     135 ..     125     136 .. 0.78
   2 !   13.3   0.0   5.6e-06       0.1       5      35 ..     165     191 ..     160     193 .. 0.80
   3 !   22.7   0.1   6.2e-09   0.00011       3      38 .]     218     251 ..     216     251 .. 0.95
   4 !   19.4   0.1   6.7e-08    0.0012       2      37 ..     253     286 ..     252     287 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 1
        Sel1  22 DpekAiewy 30 
                 ++++Ai++ 
  KHJ33821.1 127 NIQEAIRLH 135
                 688999975 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 5.6e-06
        Sel1   5 yrLGmfylylnGlgvpkDpekAiewyekAAe 35 
                 y L   +   +G g  +Dp kA++++  AA 
  KHJ33821.1 165 YGLS--L--RHGWGCTPDPVKALKYLSAAAT 191
                 3344..5..88999***************95 PP

  == domain 3  score: 22.7 bits;  conditional E-value: 6.2e-09
        Sel1   3 AmyrLGmfylylnGlgvpkDpekAiewyekAAeqGd 38 
                 A y L+   ++ nG g+p D+  A ++ye AA++Gd
  KHJ33821.1 218 AIYELA--NCFRNGWGLPVDEVAAKQYYETAANLGD 251
                 89****..999***********************97 PP

  == domain 4  score: 19.4 bits;  conditional E-value: 6.7e-08
        Sel1   2 eAmyrLGmfylylnGlgvpkDpekAiewyekAAeqG 37 
                 +Am+ ++  ++y  G g +k++ +A ++y++A + G
  KHJ33821.1 253 DAMNEVA--QCYVSGFGCKKNKFLAARYYRMAEREG 286
                 7******..***********************7776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       851  (0.047465); expected 358.6 (0.02)
Passed bias filter:                      566  (0.031569); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 2482.87
//
Query:       KHJ33822.1  [L=416]
Description: putative cop9 signalosome complex subunit 4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-13   49.4   0.3      4e-12   46.6   0.0    2.6  4  PCI       PCI domain
    8.3e-06   25.6   0.4    2.1e-05   24.3   0.4    1.8  1  RPN7      26S proteasome subunit RPN7
     0.0027   18.0   0.0        3.2    8.1   0.0    2.9  2  DUF1722   Protein of unknown function (DUF1722)
  ------ inclusion threshold ------
      0.093   11.5   0.2       0.15   10.8   0.2    1.3  1  LppC      LppC putative lipoprotein


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0         2   8.8e+03      53      69 ..     120     136 ..      85     144 .. 0.67
   2 ?   -1.5   0.0       0.8   3.6e+03      31      63 ..     177     211 ..     148     214 .. 0.73
   3 !   46.6   0.0   8.8e-16     4e-12      12     104 ..     273     360 ..     263     361 .. 0.89
   4 ?   -3.8   0.0         4   1.8e+04      14      29 ..     380     395 ..     374     404 .. 0.58

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2
                 HHHHCESEEEHHHHHHH CS
         PCI  53 qvskiyssislerlakl 69 
                 + +ki  +i+le+ +++
  KHJ33822.1 120 EAAKILARIPLESSQRK 136
                 44555566666666655 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.8
                 HHTTHHHHHHHHHHHHH..HHHHHHHHHCESEEEH CS
         PCI  31 addglaqllesLekkvr..erllrqvskiyssisl 63 
                 +d++l+ + + ++ +++  +r + + ++ y+ is+
  KHJ33822.1 177 EDRDLNLHFKLCQARIQdsKREFLSAAQGYQDISF 211
                 56666667777777776445777788888888887 PP

  == domain 3  score: 46.6 bits;  conditional E-value: 8.8e-16
                 HTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTTTEEEEC CS
         PCI  12 sgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvskiyssislerlaklldlsvdevEkilvklIrdgeirakidqesgivvfk 104
                   ++++f e l+ +     +  ++++  + L k v+e++lr  s+ y++i ++ l  ll+l++d++E+  +++I++g++ ++idq ++i+ f+
  KHJ33822.1 273 PDEVAKFAEGLAPH-----QLAKTSDGSNVLAKAVIEHNLRGASRLYNNIGFDALGILLGLDSDKAEETTARMIEQGRLVGRIDQIKRIIWFE 360
                 55577777777777.....666889999*************************************************************9886 PP

  == domain 4  score: -3.8 bits;  conditional E-value: 4
                 SHHHHHHHHHHHHHHH CS
         PCI  14 nlsgfseelkdleeel 29 
                 +l++++ ++++  ee+
  KHJ33822.1 380 ELKRWDANVQSIAEEV 395
                 5666666666653333 PP

>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   0.4   4.8e-09   2.1e-05      64     139 ..     134     209 ..      87     234 .. 0.84

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 4.8e-09
                 CC--SHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHCSSS---.HHHHHHHHHHHHHHHHHTT-HHHHHHHHCTS CS
        RPN7  64 eyctslkhkidmllnlirvaiffndwdlvskylekakellekggdwerknrlkvyeGlallairkfkeAaellldi 139
                 +  ++++ k++++++++r  +++ d  l+++yl+kak+ +   +d++ +  +k  ++ ++++ r+f +Aa+   di
  KHJ33822.1 134 QRKVTSEDKVKIWIRITRYYLEVDDTTLAEQYLNKAKNFIYAVEDRDLNLHFKLCQARIQDSKREFLSAAQGYQDI 209
                 56688999**************************************************************976665 PP

>> DUF1722  Protein of unknown function (DUF1722)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0   0.00072       3.2       6      45 ..      14      53 ..      12      63 .. 0.91
   2 !    6.5   0.0    0.0022       9.7      42      75 ..      70     103 ..      64     128 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00072
     DUF1722  6 ahsqkeyrelgrlvanakkepleelaeeYeellmealskp 45
                + s+++y+e+g+l++  ++++  el++++++ ++++++++
  KHJ33822.1 14 SSSPDRYQEIGNLLKVVTSRDKTELTTNFSAIVDTIFAQN 53
                679*****************************99999876 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0022
     DUF1722  42 lskpatrkkhinvlqhilgyfkkklsaeekqell 75 
                 l+     ++ i v +hi+ y+++++s+ e+q+++
  KHJ33822.1  70 LRSLEDNATKIAVGEHIVKYLSHQVSSFEEQYIQ 103
                 55556677889999*************9999864 PP

>> LppC  LppC putative lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   3.3e-05      0.15      93     150 ..      97     154 ..      73     172 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 3.3e-05
                 -HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHS-H CS
        LppC  93 spsqksryyelraailearkdaleavkerieldqllsdvkakqenqdkiwallrslda 150
                  ++q ++ +e+ a+ +e+++d lea+k ++++   +s+ k   e + kiw  +  +  
  KHJ33822.1  97 FEEQYIQILEIIATSFENNDDFLEAAKILARIPLESSQRKVTSEDKVKIWIRITRYYL 154
                 4679999*********************999999999888888999999988877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       833  (0.046461); expected 358.6 (0.02)
Passed bias filter:                      590  (0.0329076); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.38
# Mc/sec: 3241.28
//
Query:       KHJ33823.1  [L=1770]
Description: hypothetical protein EV44_g1683 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1770 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       849  (0.0473534); expected 358.6 (0.02)
Passed bias filter:                      234  (0.0130515); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.87u 0.29s 00:00:01.15 Elapsed: 00:00:00.48
# Mc/sec: 11129.39
//
Query:       KHJ33824.1  [L=294]
Description: putative rna recognition domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-13   49.8   0.0    3.1e-13   49.3   0.0    1.2  1  RRM_1            RNA recognition motif. (a.k.a. RRM, RBD, or 
  ------ inclusion threshold ------
      0.017   14.7   0.0      0.028   14.0   0.0    1.2  1  RRM_5            RNA recognition motif. (a.k.a. RRM, RBD, or 
       0.07   11.5   0.2       0.11   10.8   0.2    1.3  1  DUF515           Protein of unknown function (DUF515)
       0.07   12.9   1.1       0.12   12.1   1.1    1.3  1  Viral_helicase1  Viral (Superfamily 1) RNA helicase


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.0   6.9e-17   3.1e-13       1      69 [.      89     158 ..      89     159 .. 0.97

  Alignments for each domain:
  == domain 1  score: 49.3 bits;  conditional E-value: 6.9e-17
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 ++V+ L++++t + L+e+Fs +G i++++++ + + + ++g+a++ +  + dAe+A++++++ +++g ++
  KHJ33824.1  89 IVVEKLTKNITADHLREIFSTYGTIRDLDMPMNrQFDFNRGTAYILYSAEVDAEAAIAHMHESQIDGAVI 158
                 789***************************************************************9876 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   6.2e-06     0.028      26      97 ..      86     161 ..      63     171 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 6.2e-06
       RRM_5  26 gsVllVyglepdkvnldklFnlfclYgnvervkflktk.....ketalvqmgdasaveravqHLnnaklfgkrleva 97 
                 ++ ++V  l ++++++d+l  +f+ Yg ++ + +  ++     ++ta +  + ++++e a+ H+ + ++ g  ++v 
  KHJ33824.1  86 STKIVVEKL-TKNITADHLREIFSTYGTIRDLDMPMNRqfdfnRGTAYILYSAEVDAEAAIAHMHESQIDGAVINVS 161
                 444555555.5789****************999866642223369**************************999986 PP

>> DUF515  Protein of unknown function (DUF515)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   2.5e-05      0.11     327     419 ..      34     130 ..      11     141 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 2.5e-05
      DUF515 327 tsssessstsespGdvsi..sdsssasdsssvsqstseslsssisYsvNLaeiLkAiaadkld...asdevkaqlgnYGk.ellelEdntqllaldEnv 419
                   s   ++ s sp  +s   s+s+s s s s +++ s+s s s   s+  +   k i+++kl     +d++++ ++ YG  + l++  n q+  ++  +
  KHJ33824.1  34 RRSITPRTVSRSPRKTSRyrSESRSRSRSRSRTRTRSRSRSPSHGRSLSPPRSTK-IVVEKLTkniTADHLREIFSTYGTiRDLDMPMNRQF-DFNRGT 130
                 2333334689999998862255666677778888889999999999998777666.4455544122249**********6345566666666.555555 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   1.1   2.7e-05      0.12      98     187 ..      21     109 ..      20     114 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.7e-05
  Viral_helicase1  98 lQipfhsrnasfllahlpsslshrvgrrttyllpsdvaeilsak..vgteveversgelkvetepkgqekvlvyltftqalkealgvrevtt 187
                      +Q+ + sr++s +++++++++ +r++r+ t++++s       ++  + t++ + + +++++ + p ++  ++v+++ t++ ++++ ++ ++t
       KHJ33824.1  21 NQGRTASRSPSKPRRSITPRTVSRSPRK-TSRYRSESRSRSRSRsrTRTRSRSRSPSHGRSLSPPRST--KIVVEKLTKNITADHLREIFST 109
                      7999**********************99.555555555555555355666666666666767777777..****************993344 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       714  (0.0398237); expected 358.6 (0.02)
Passed bias filter:                      282  (0.0157287); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 1958.34
//
Query:       KHJ33825.1  [L=1156]
Description: putative swi snf family dna-dependent atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-57  194.9   0.0    2.8e-57  194.0   0.0    1.4  1  SNF2_N        SNF2 family N-terminal domain
    9.7e-16   58.1   0.2      7e-15   55.3   0.0    2.4  2  Helicase_C    Helicase conserved C-terminal domain
    3.5e-08   33.6   1.5    3.2e-07   30.5   0.0    2.9  2  ResIII        Type III restriction enzyme, res subunit
    1.5e-07   31.2   2.0    1.5e-07   31.2   2.0    2.0  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    2.2e-07   30.8   3.9    4.8e-07   29.7   3.9    1.6  1  zf-RING_UBOX  RING-type zinc-finger
    2.4e-06   27.8   5.7    6.6e-06   26.4   5.7    1.8  1  zf-RING_2     Ring finger domain
    2.9e-06   27.0   6.7    7.1e-06   25.8   6.7    1.7  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    1.5e-05   24.8   5.9    6.8e-05   22.6   5.9    2.0  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    0.00027   21.0   4.7    0.00078   19.5   4.7    1.9  1  zf-C3HC4_4    zinc finger of C3HC4-type, RING
     0.0015   18.4   4.3     0.0035   17.3   4.3    1.7  1  zf-RING_5     zinc-RING finger domain
  ------ inclusion threshold ------
      0.013   15.7   3.5      0.015   15.4   1.2    2.5  2  LHH           A nuclease of the HNH/ENDO VII superfamily with
       0.23   11.2   3.7       0.21   11.3   0.5    2.5  2  zf-RING_11    RING-like zinc finger
        1.4    8.8   5.7        3.3    7.6   5.1    2.0  1  zf-RING_4     RING/Ubox like zinc-binding domain
        3.3    7.6   9.7         25    4.8   9.8    2.4  2  Prok-RING_4   Prokaryotic RING finger family 4


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.0   0.0   2.2e-60   2.8e-57      50     350 .]     436     743 ..     409     743 .. 0.82

  Alignments for each domain:
  == domain 1  score: 194.0 bits;  conditional E-value: 2.2e-60
                 HHHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS.-EEE--SSHHHH------------- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  50 eakqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsss.alrvlvyggqkkmkkkntkvapkll 147
                 + ++ ++GGiLaD+mGLGKT+ +lal+l   +  ++          ++ tLiv P +l++qWe+ei+  ++++ +l  +v +g+k  k      a +  
  KHJ33825.1 436 KEESAIKGGILADDMGLGKTISALALVLSRPS-TKS---------SRKTTLIVGPVALIRQWEREIRVKIRKKwRLSTIVVHGSK--K-----YAWDDI 517
                 5677899*********************3333.222.........3356*****************9888764388889999975..3.....345568 PP

                 ----EEEE-HHHHHHHT.......................TTS-S-S..-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxx.................xxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 148 adydvvittYdvlsreaelq.................kkrsvlkqve..wkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLl 227
                   yd+ +ttY +ls+e  +                  kk+ +l+  +    r++lDE++ +kn+++  a+a+ +L++ +r++ltGTP+ n++++ly+ +
  KHJ33825.1 518 SHYDIALTTYGTLSSEFRRLikwkeshpgqnfdesilKKKFPLVGPKsqFYRIILDEAQSIKNKNTVSAKACFHLNATYRICLTGTPMMNNVTELYSVI 616
                 89************77654499***************777777765533779*********************************************** PP

                 HHH-TTTT--HHHHHHHT...HHHHH..HHHHHHHHHHHTT-STTEE---GGGT.....--S---EEEEEEEEE--HHHHHHHH............... CS
                 xxxxxxxxxxxxxxxxxx...xxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 228 kfLreepfgekqtfdkll...qrpie..aqaekgrsrLlqllqrlmlrrakkdv.....eknlPpkteeiiflklskverksYnrllevlrkkalakll 316
                  fLr++p++e+  f++ +   +rp++  +     +++L  ll+ ++lrr+k+ +      ++lPpk+e+i ++ +++ e  +Yn l +++  ++ + l 
  KHJ33825.1 617 LFLRVKPYNEWSRFNSDFgilSRPAAseSSISSAMKKLQALLKAILLRRTKNTLidgkpIISLPPKIEKIQHVVFNDDESAFYNALESKSKIQFNNYLA 715
                 ************9998752226777765566778899*****************98665569**********************555555555544444 PP

                 .....HHHHHH-HHH-HHHHHHHHHHHHH---XX CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 317 krseaalkssskskekilelllelrqacnhpqlv 350
                   s +  +      ++il lll+lrqac+hp l+
  KHJ33825.1 716 AGS-IGKNY-----SNILVLLLRLRQACCHPHLI 743
                 442.22222.....66***************985 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       1.5   1.9e+03      13      50 ..     153     197 ..     141     218 .. 0.68
   2 !   55.3   0.0   5.5e-18     7e-15       2     111 .]     984    1096 ..     983    1096 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.5
                 TTTTSEEEEEESSHHHHHH..HHHHHHHT.....TSTEEEESTTS CS
  Helicase_C  13 eeeggkilifvntidrlek..vklllekk.....gikvavlhgel 50 
                 ++++ k+li++ ++d+ ++  ++ll +++      i+  +l+ + 
  KHJ33825.1 153 NRQKTKSLIVLDSTDESNDhsTELLVRQQkeieeRIQLERLDEQY 197
                 567788999999999776677777733333455566666666654 PP

  == domain 2  score: 55.3 bits;  conditional E-value: 5.5e-18
                  HHHHHHHHH.HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSS CS
  Helicase_C    2 kleallell.kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlpr 95  
                  k+ +++el+ k+  e++kilif+++++ l+ +++  e++  ++++++g+++++ r  ++e+f  + +++ +L++ +++  G+++ +++ Vi++d+ +
  KHJ33825.1  984 KITKCMELIrKFLDEKQKILIFSQFVSLLDLLQVPIEEERWNYLRYDGSMSADLRHFAIEKFSdSTTHNiMLLSLKAGNAGLNLISASRVIILDPFW 1080
                  7888999999999**************9976555577889**********************9656666799************************* PP

                  SHHHHHHHHTTSSSTT CS
  Helicase_C   96 nvtsyiqriGRtgRag 111 
                  n+   +q+++R++R+g
  KHJ33825.1 1081 NPFIEMQAVDRAHRIG 1096
                  **************97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   1.1      0.67   8.6e+02      96     147 ..     159     222 ..     118     276 .. 0.64
   2 !   30.5   0.0   2.5e-10   3.2e-07       4     169 ..     422     604 ..     419     606 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.67
                 -..............-SEEEEEHHHHHHTH...............HHHTTT-S......EEEEETGGGTTS. CS
      ResIII  96 a.......kekdstnkkilvttiqsldadseee.......eeeseellrdrfd......viiiDEaHrlgak 147
                 +        e++++++++lv + +++ ++++ e       ++ +                 ++D +H + ++
  KHJ33825.1 159 SlivldstDESNDHSTELLVRQQKEIEERIQLErldeqyaRRLQ--------SelesnyTDLNDQCHSYMRS 222
                 23333333446778888888888888888866666543222222........12223445578888877665 PP

  == domain 2  score: 30.5 bits;  conditional E-value: 2.5e-10
                 E-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--...... CS
      ResIII   4 lreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekdst 102
                 l+e+Q+ a+  l++k +    k g+++   G GKT+ a++l+ +  + ++ +k+ ++v   +l+ q+++e++  + ++    + +v+g kk a   d++
  KHJ33825.1 422 LYEHQKIALFWLKSKEE-SAIKGGILADDMGLGKTISALALVLSRPSTKSSRKTTLIVGPVALIRQWEREIRVKIRKKWRLSTIVVHGSKKYA-WDDIS 518
                 67888888877766655.7778999*************99999999999999*******************9999998776888888888888.99*** PP

                 .-SEEEEEHHHHHHTH.................HHHTTT-S.........EEEEETGGGTTS.TTTHH.HHHT---SEEEEEESS- CS
      ResIII 103 nkkilvttiqsldadseee.........eeeseellrdrfd.........viiiDEaHrlgakkswre.ilekfkeavllglTATp 169
                 + +i +tt+ +l+++ ++          ++ +e+ l+++f+          ii DEa  ++ k+++ + +  ++++ +++ lT+Tp
  KHJ33825.1 519 HYDIALTTYGTLSSEFRRLikwkeshpgQNFDESILKKKFPlvgpksqfyRIILDEAQSIKNKNTVSAkACFHLNATYRICLTGTP 604
                 ****************6668899999987777777777777888888888*******9999965443334555699*********9 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   2.0   1.1e-10   1.5e-07       1      31 [.     784     814 ..     784     819 .. 0.90
   2 ?   -3.8   0.8       9.6   1.2e+04      36      40 .]     834     838 ..     832     838 .. 0.84

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 1.1e-10
  zf-C3HC4_2   1 kCpiCldmlkdpsvvtpCgHvfCqkCilrsL 31 
                 +CpiC+d  ++p  + pCgH +C +C+++  
  KHJ33825.1 784 ECPICYDGVENPRIILPCGHDTCTECLAKIT 814
                 6***********9999***********9964 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 9.6
  zf-C3HC4_2  36 eCPlC 40 
                 +CP C
  KHJ33825.1 834 KCPSC 838
                 8**99 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   3.9   3.7e-10   4.8e-07       1      39 []     785     836 ..     785     836 .. 0.74

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 3.7e-10
  zf-RING_UBOX   1 CpIClelftdP.lvlpCGHtFCreCl......w......elskslegafkCP 39 
                   CpIC++  ++P ++lpCGH  C eCl      +      e+ +s+e   kCP
    KHJ33825.1 785 CPICYDGVENPrIILPCGHDTCTECLakitdqQtllsssEYESSNEIVSKCP 836
                   ***********8778***********87665414444555555555555665 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   5.7   5.2e-09   6.6e-06       2      44 .]     784     839 ..     783     839 .. 0.77

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 5.2e-09
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssst...............CPlCr 44 
                 eCpIC++ +++++ +  lpCgH  + eCl++++ ++                 CP Cr
  KHJ33825.1 784 ECPICYDGVENPRII--LPCGHDTCTECLAKITDQQTLlssseyessneivskCPSCR 839
                 8********875554..49**********77633333355555889999********9 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   6.7   5.5e-09   7.1e-06       1      41 []     785     838 ..     785     838 .. 0.90

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 5.5e-09
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHC............TSSB-.-TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilks............rkkvk.CPlC 41 
                 CpiC + +++p  +l+C+H  C++C+ ki+++            ++ v+ CP C
  KHJ33825.1 785 CPICYDGVENPRIILPCGHDTCTECLAKITDQqtllssseyessNEIVSkCPSC 838
                 *******************************99999999999874444459999 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   5.9   5.3e-08   6.8e-05       4      46 ..     784     841 ..     782     844 .. 0.85

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 5.3e-08
                 B-TTTSSSBS-.EEETTEEEEEE-HHHHHHHHH...............TT-B-TTT--B CS
  zf-C3HC4_3   4 eCviClerprn.vvllpCgHlvlCeeCaekllk...............rkkkCpiCrrp 46 
                 eC+iC++  +n  ++lpCgH  +C eC+ k+ +                  kCp Cr p
  KHJ33825.1 784 ECPICYDGVENpRIILPCGHD-TCTECLAKITDqqtllssseyessneIVSKCPSCRGP 841
                 8******988846999*****.*********8888899888888877767889999876 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   4.7   6.1e-07   0.00078       1      32 [.     785     817 ..     785     838 .. 0.83

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 6.1e-07
  zf-C3HC4_4   1 CPiCldYLekP.vsleCGhsfClsCisslqkep 32 
                 CPiC d  e+P + l+CGh  C +C+ ++  ++
  KHJ33825.1 785 CPICYDGVENPrIILPCGHDTCTECLAKITDQQ 817
                 ***********6778***********9887655 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   4.3   2.7e-06    0.0035       1      43 [.     784     839 ..     784     840 .. 0.94

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 2.7e-06
   zf-RING_5   1 hCnkCfeklskeekfyltsCgHifCekClkkll...............ekeavCpiCr 43 
                 +C++C++ +  e + ++++CgH  C +Cl k +               e   +Cp Cr
  KHJ33825.1 784 ECPICYDGV--ENPRIILPCGHDTCTECLAKITdqqtllssseyessnEIVSKCPSCR 839
                 6********..********************999999999999999999999999998 PP

>> LHH  A nuclease of the HNH/ENDO VII superfamily with conserved LHH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   1.2   1.2e-05     0.015      39      75 ..     941     984 ..     936     985 .. 0.92
   2 ?   -3.4   0.0       8.7   1.1e+04      41      58 ..    1094    1113 ..    1083    1123 .. 0.58

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.2e-05
         LHH  39 sehkenskilH.......esfrnseidrkefekfrkkYWkarae 75 
                 + h++n+k++H       +++++s i+rk++ k+ k++W+  a+
  KHJ33825.1 941 NKHNDNEKKIHlslamlkQEANKSAINRKRYMKYLKSHWQPSAK 984
                 689**************999999****************98775 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 8.7
         LHH   41 h..kenskilHesfrnseid 58  
                  +  ++n+  +H+  ++s+++
  KHJ33825.1 1094 RigQQNTVEIHRILIKSTVE 1113
                  25566666777544444443 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.5   0.00017      0.21       1      22 [.     784     803 ..     784     804 .. 0.93
   2 ?   -0.9   0.2       1.1   1.4e+03       2      15 ..     806     819 ..     806     822 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00017
  zf-RING_11   1 eCsICLeefkpgqalfilpCsH 22 
                 eC IC + +++   ++ilpC+H
  KHJ33825.1 784 ECPICYDGVEN--PRIILPCGH 803
                 9********65..999****** PP

  == domain 2  score: -0.9 bits;  conditional E-value: 1.1
  zf-RING_11   2 CsICLeefkpgqal 15 
                 C+ CL ++++ q+l
  KHJ33825.1 806 CTECLAKITDQQTL 819
                 777*******9987 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   5.1    0.0026       3.3      19      45 ..     800     840 ..     784     842 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0026
   zf-RING_4  19 eCgyqiClfCyhrileee..............egrCPaCre 45 
                 +Cg+  C  C+ +i +++                +CP Cr 
  KHJ33825.1 800 PCGHDTCTECLAKITDQQtllssseyessneiVSKCPSCRG 840
                 69*************9545566666777777799*****96 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.74   9.5e+02      32      38 ..     784     790 ..     780     795 .. 0.77
   2 ?    4.8   9.8      0.02        25       1      28 [.     785     813 ..     785     843 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.74
  Prok-RING_4  32 sCPlCqr 38 
                   CP+C  
   KHJ33825.1 784 ECPICYD 790
                  59*9975 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.02
  Prok-RING_4   1 CvlCgeq.ekkailepCgHlvCkeCfdsk 28 
                  C +C    e+ +i+ pCgH  C eC+ + 
   KHJ33825.1 785 CPICYDGvENPRIILPCGHDTCTECLAKI 813
                  7777664388899************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1156 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1243  (0.069329); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.84u 0.26s 00:00:01.10 Elapsed: 00:00:00.45
# Mc/sec: 7676.12
//
Query:       KHJ33826.1  [L=439]
Description: putative wd repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-11   44.3   7.3     0.0065   17.3   0.1    4.4  4  WD40        WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.018   14.0   0.1       0.13   11.2   0.0    2.0  2  PALB2_WD40  Partner and localizer of BRCA2 WD40 domain
      0.026   15.0   0.7         17    6.0   0.1    4.0  4  PQQ_3       PQQ-like domain
       0.03   13.9   0.4       0.24   11.0   0.1    2.1  3  PQQ_2       PQQ-like domain
      0.035   14.2   0.9         15    5.8   0.0    2.9  3  WI12        Wound-induced protein WI12


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.97   3.5e+03      10      33 ..      90     110 ..      81     115 .. 0.75
   2 !   15.0   0.1   9.6e-06     0.035       2      37 ..     120     154 ..     119     154 .. 0.85
   3 !   17.3   0.1   1.8e-06    0.0065       2      38 .]     169     209 ..     168     209 .. 0.81
   4 !   12.9   0.3   4.3e-05      0.15       8      38 .]     281     312 ..     274     312 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.97
                 SSSEEEEEEETTSSEEEEEETTSE CS
        WD40  10 HssvtslafspdgawlasGsdDgt 33 
                 H  v+sla   dg +++ G+  g 
  KHJ33826.1  90 H--VHSLAIVGDGILVL-GTAEGR 110
                 5..99999999999988.765655 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 9.6e-06
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +++ t  +H ++v+++     ++ ++sGs+D ++++W
  KHJ33826.1 120 RQVSTVAAHlQPVNCV--ATTNSHIISGSEDSKLYVW 154
                 56788899********..55666688*********** PP

  == domain 3  score: 17.3 bits;  conditional E-value: 1.8e-06
                 EEEEEEESS.SSEEEEE..EETTSSEE.EEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtsla..fspdgawl.asGsdDgtvriWd 38 
                 ++lr l+ H  ++tsl    s++ + + +s+s+D+t+ +W+
  KHJ33826.1 169 EPLRCLSNHqAPITSLTvgHSRSTTNIcVSASKDNTILVWN 209
                 7999*****888****987555555552589*********8 PP

  == domain 4  score: 12.9 bits;  conditional E-value: 4.3e-05
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  G  +s+ +++ + dg++l++G+  g +  Wd
  KHJ33826.1 281 PGDvGSILCVKSNYDGTLLLTGHSSGQINQWD 312
                 5665679***************88*******9 PP

>> PALB2_WD40  Partner and localizer of BRCA2 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0     0.097   3.5e+02     194     217 ..     103     126 ..      80     171 .. 0.69
   2 ?   11.2   0.0   3.6e-05      0.13     160     217 ..     161     220 ..     156     228 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.097
  PALB2_WD40 194 lgttvlnniviWnlktGqllkkie 217
                 +  t+  ++v W+l tG+ ++++ 
  KHJ33826.1 103 VLGTAEGRLVTWELSTGRQVSTVA 126
                 445566667777777776655543 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 3.6e-05
  PALB2_WD40 160 slseeGrskekqtlmpPeeti..lafaeveGekdallgttvlnniviWnlktGqllkkie 217
                 sls+    +  + l   ++ i  l+      + +  ++++ +n i++Wn ++Gqll+++ 
  KHJ33826.1 161 SLSQRDSREPLRCLSNHQAPItsLTVGHSRSTTNICVSASKDNTILVWNYHSGQLLRTFL 220
                 5555555555555555555442255666677888999*******************9875 PP

>> PQQ_3  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1    0.0048        17      10      34 ..      88     112 ..      84     118 .. 0.82
   2 ?    1.8   0.0       0.1   3.6e+02       4      35 ..     113     153 ..     112     154 .. 0.78
   3 ?    0.9   0.0       0.2   7.1e+02      21      36 ..     234     249 ..     223     250 .. 0.84
   4 ?    1.1   0.0      0.17     6e+02       8      33 ..     279     308 ..     272     313 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0048
       PQQ_3  10 pgpvnsspavdgglvyvgtgdGtly 34 
                 p+ v+s + v++g+++ gt  G+l+
  KHJ33826.1  88 PYHVHSLAIVGDGILVLGTAEGRLV 112
                 667766668899**********997 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.1
       PQQ_3   4 lWsvqlpgpvnssp..........avdgglvyvgtgdGtlyA 35 
                  W+ +++ +v s++          a+ + ++  g++d +ly 
  KHJ33826.1 113 TWELSTGRQV-STVaahlqpvncvATTNSHIISGSEDSKLYV 153
                 5888888766.5555777888877888999999999999995 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.2
       PQQ_3  21 gglvyvgtgdGtlyAl 36 
                 ++ vyvg ++G++ ++
  KHJ33826.1 234 DRGVYVGLDNGSIQMI 249
                 5669*******99765 PP

  == domain 4  score: 1.1 bits;  conditional E-value: 0.17
       PQQ_3   8 qlpgpvnssp.....avdgglvyvgtgdGtl 33 
                 ++pg+v +s       +dg l+ +g + G +
  KHJ33826.1 279 SVPGDV-GSIlcvksNYDGTLLLTGHSSGQI 308
                 455777.566788888999999999888765 PP

>> PQQ_2  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   6.6e-05      0.24     165     234 ..      46     122 ..      35     125 .. 0.73
   2 ?   10.9   0.1   6.9e-05      0.25      29      86 ..      92     149 ..      64     216 .. 0.79
   3 ?   -1.2   0.0      0.35   1.3e+03     173     206 ..     295     327 ..     277     337 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 6.6e-05
       PQQ_2 165 isgrpvva....egtVyassgqgrllaldlatgrrl.wske.issinglpildgdllyvvsa.gelialdratGavl 234
                 +s++pv a    +  ++a+  ++ ++ +  ++++++  s   +  +++l i+ +++l++++a g+l+ ++++tG+++
  KHJ33826.1  46 NSSTPVNAltttSTHIFAAQAEKAVVHVYSREKQNQeASIFfPYHVHSLAIVGDGILVLGTAeGRLVTWELSTGRQV 122
                 55666666554344788888888788885555554423444566799999999999999997799999999999976 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 6.9e-05
       PQQ_2  29 vsravlsggtlfvatgggrlvaldaatGkvlWettlegpvvgaplvaegrvvvvasdg 86 
                 +s a +++g l+ +t +grlv ++ +tG+++ ++++  + v+    ++ +++  ++d 
  KHJ33826.1  92 HSLAIVGDGILVLGTAEGRLVTWELSTGRQVSTVAAHLQPVNCVATTNSHIISGSEDS 149
                 4557778888888888999999999999988888884444444466777777666666 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.35
       PQQ_2 173 egtVyassgqgrllal.dlatgrrlwskeissing 206
                 +gt++  +++   +++ ++  grr++s eis+ ++
  KHJ33826.1 295 DGTLLLTGHSS--GQInQWDVGRRQYSSEISNLTT 327
                 45788888888..8888899999889888888666 PP

>> WI12  Wound-induced protein WI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0    0.0041        15      11      41 ..      84     114 ..      76     117 .. 0.86
   2 ?    5.7   0.3    0.0043        15       3      92 ..     116     210 ..     115     221 .. 0.80
   3 ?   -2.6   0.0       1.6   5.7e+03      23      32 ..     372     381 ..     356     384 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0041
        WI12  11 easfefkprsvdafgstviaeGtdetrklyW 41 
                 +  f ++++s+  +g+ +++ Gt e+r ++W
  KHJ33826.1  84 SIFFPYHVHSLAIVGDGILVLGTAEGRLVTW 114
                 44588999**********************9 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0043
        WI12   3 lltGakageasfefkprsvdafgstviaeGtdetrklyWv..haWtvk.dGvitqvreyfntsltvtrlsksaagkeaaiaasasksks..vWes 92 
                 l tG + + ++ +++p    a  +  i+ G+++++   W+  h+  ++       +r  +n +  +t l+ +   ++++i  sask ++  vW+ 
  KHJ33826.1 116 LSTGRQVSTVAAHLQPVNCVATTNSHIISGSEDSKLYVWLisHVLSLSqRDSREPLRCLSNHQAPITSLTVGHSRSTTNICVSASKDNTilVWNY 210
                 56899999999999999999999999999*9999999997668888885556678*************999999999988777766554227875 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 1.6
        WI12  23 afgstviaeG 32 
                  f+++v+aeG
  KHJ33826.1 372 EFDEAVLAEG 381
                 4899999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 2994.59
//
Query:       KHJ33827.1  [L=156]
Description: putative atp synthase protein 9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-10   41.4  13.0    2.1e-10   40.8  13.0    1.4  1  ATP-synt_C  ATP synthase subunit C
  ------ inclusion threshold ------
       0.17   11.8   0.1       0.23   11.3   0.1    1.2  1  ACCA        Acetyl co-enzyme A carboxylase carboxyltransferas


Domain annotation for each model (and alignments):
>> ATP-synt_C  ATP synthase subunit C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8  13.0   2.4e-14   2.1e-10       1      59 [.      91     152 ..      91     153 .. 0.93

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 2.4e-14
                 HHHHHHH.GGGHHHHHHHHHHHHHHHHHHHHSG....HHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ATP-synt_C   1 lgaglavGlsalgsGigiGkagsagiravarnp....klftksliilafaeaialygLivali 59 
                 +g g a  ++  g+GigiG ++sa + avarnp    +lf+ +++++af+eai+l+ L+va++
  KHJ33827.1  91 IGMGSAA-IGLGGAGIGIGLVFSALLTAVARNPslrgQLFSYAILGFAFVEAIGLFDLMVAMM 152
                 5677776.89999********************999999999*******************98 PP

>> ACCA  Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   2.5e-05      0.23      28      77 ..      36      86 ..       8      94 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.5e-05
        ACCA 28 dlseeieklekkleklkkeiykn.ltpwqkvqlaRhpeRpktldyiealfe 77
                +l+++ +++++ l++lk++  ++ l+ + +  +aR++ Rp++ ++ +al++
  KHJ33827.1 36 KLTTASASFRTPLRTLKRQQASQvLSVVTRNVIARQTARPYSNEIANALVQ 86
                4666777778888888886665549*******************9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1153.72
//
Query:       KHJ33828.1  [L=525]
Description: putative cystathionine beta-synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-64  216.5   0.2    6.4e-64  216.2   0.2    1.1  1  PALP      Pyridoxal-phosphate dependent enzyme
    1.3e-13   51.2   0.1    3.9e-09   36.8   0.0    3.0  3  CBS       CBS domain


Domain annotation for each model (and alignments):
>> PALP  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.2   0.2   7.2e-68   6.4e-64       2     294 .]      13     311 ..      12     311 .. 0.91

  Alignments for each domain:
  == domain 1  score: 216.2 bits;  conditional E-value: 7.2e-68
                 GGCSSS--EEEECCTCCCCCCE..EEEEEGGGSTTSBTTHHHHHHHHHHHHTT...TTTSEEEEEBSSHHHHHHHHHHHHHT-EEEEEEETTS-HHHHH CS
        PALP   2 tlgigpTPlvrlprlskelgvp..lflKlEslnptgSfKdRgaeyllarlkeg...tgaktvveassGNhgralAaaaallGlkvtivvpadaspekva 95 
                 t  ig+TPlvrl+++ + lg++  +++K E+ln +gS+KdR a  +++++++    ++++t++e +sGN+g++lA+++a  G+k +i +p+++s+ekva
  KHJ33828.1  13 TELIGNTPLVRLNKIPQSLGIEaeVYAKVEFLNAGGSVKDRIALRMIEEAEKSgriKQGDTLIEPTSGNTGIGLALVGAIKGYKTIITLPEKMSQEKVA 111
                 5789*********************************************88888********************************************* PP

                 HHHHTT-EEEEECCH..HHHHHHH...HHHHHHHSTTCEE--TTTSHHHHHH.HHTHHHHHHHHTTTTEEEEEEE-SSSHHHHHHHHHHHHHSTT-EEE CS
        PALP  96 llrllGaevvevggd..ydeavaa...aaelaaegegaylvsqfdnptvieg.ygtiglEileqlggkpdavvvpvGgGgliaGiaaglkerrpdvrvi 188
                  lr+lGa+++++++   +d+ +++   a++l +e+++ ++++q+ np++ ++    ++ Ei++q++g+++a+v+++G+Gg+++G+++glk+++pd++vi
  KHJ33828.1 112 VLRALGATIIRTPTQaaFDSPESHigvANRLHNEIPNSHILDQYVNPDNPLAhEMGTAEEIWSQTNGRIKAIVAGAGTGGTVTGLSRGLKKHNPDIKVI 210
                 ************55555888888888789***********************9********************************************** PP

                 EEEECTTC.GGTTCCS..S.SS..B.SSS.CCSTCS.CGTTCCHHHHSEEEEEEEEEEHHHHHHHHHHHHHHHSB-B-HHHHHHHHHH.HHHHHHCCTT CS
        PALP 189 gvepegsd.alarslragrrvtvpvsdtiadglavg.spselafelldrlvdeivtvsdeealeamrllarregivvepssaaalaal.klreagelke 284
                 +++p+gs  a+ ++l     ++   +   ++g++ + +p++l+ e +    d  +   d e +  +r+l  +eg++v+ ss+ a+aa+ k ++  +l++
  KHJ33828.1 211 AADPVGSIlAVPETL----NHKNANHAYKVEGIGYDfVPGVLDRESV----DIWYKTEDRESFMFARRLIAEEGLLVGGSSGSAMAAMvKGVNELRLGK 301
                 *****6651555555....4444445888999999977777776655....55566999999999999999**************************** PP

                 CEEEEEEE-B CS
        PALP 285 gdrvvviltg 294
                 +d+vvv+l++
  KHJ33828.1 302 EDVVVVVLPD 311
                 *999999975 PP

>> CBS  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.8   0.0   4.4e-13   3.9e-09       7      56 ..     364     414 ..     358     415 .. 0.89
   2 ?   -3.1   0.0       1.2   1.1e+04      18      39 ..     424     442 ..     421     444 .. 0.70
   3 !   11.0   0.0     5e-05      0.44       7      56 ..     466     520 ..     464     521 .. 0.79

  Alignments for each domain:
  == domain 1  score: 36.8 bits;  conditional E-value: 4.4e-13
                 SSCEEEETTSBHHHHHHHHHHHTSSEEEEEETTT.BEEEEEEHHHHHHHHH CS
         CBS   7 rdvvtvppdttleealelmrekgvsrlPVVdedg.klvGivtlrDllrall 56 
                 +++ tv  +t  +ea+e+mrekg+++lPV+  +g klvG+vtl  ll++++
  KHJ33828.1 364 KPITTVLANTYCSEAIEIMREKGFDQLPVLSPNGkKLVGLVTLGNLLNWIS 414
                 7899**************************557757***********9875 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.2
                 HHHHHHHHHHHTSSEEEEEETT CS
         CBS  18 leealelmrekgvsrlPVVded 39 
                 ++e++  +  ++vs + V+d+ 
  KHJ33828.1 424 VSEVMFDF--SHVSEV-VTDSK 442
                 78888888..558888.88765 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 5e-05
                 SSCEEEETTSBHHHHHHHHHHHTSSEEEEE.....ETTT...BEEEEEEHHHHHHHHH CS
         CBS   7 rdvvtvppdttleealelmrekgvsrlPVV.....dedg...klvGivtlrDllrall 56 
                 r+++ ++ dt l+ + + + e++  ++ V+       +g   k+v ivt+ Dll +l+
  KHJ33828.1 466 RNFIEITMDTHLSALGKFF-ERNSAAI-VTdkrsgG-EGgltKPVAIVTKVDLLTWLV 520
                 78899999***********.5553344.77887743.334878***********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (525 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3646.04
//
Query:       KHJ33829.1  [L=700]
Description: putative palmitoyltransferase akr1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-34  117.8  11.2    3.5e-34  117.8  11.2    3.0  2  DHHC            DHHC palmitoyltransferase
    2.4e-26   92.1   0.0    9.6e-12   45.3   0.0    2.7  2  Ank_2           Ankyrin repeats (3 copies)
    8.7e-25   86.5   0.4    1.9e-06   28.0   0.0    4.7  4  Ank_5           Ankyrin repeats (many copies)
    3.6e-22   77.8   0.0    0.00056   20.2   0.0    5.6  5  Ank             Ankyrin repeat
    3.9e-22   78.3   0.2      9e-05   23.0   0.1    4.5  4  Ank_4           Ankyrin repeats (many copies)
    2.3e-20   70.5   2.0    4.4e-06   26.6   0.0    5.9  5  Ank_3           Ankyrin repeat
  ------ inclusion threshold ------
        0.7    9.5   6.9        1.9    8.1   6.9    1.6  1  Baculo_11_kDa   Baculovirus 11 kDa family


Domain annotation for each model (and alignments):
>> DHHC  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -9.6  14.6         7   1.8e+04      50      94 ..     306     384 ..     293     416 .. 0.46
   2 !  117.8  11.2   1.4e-37   3.5e-34       2     132 ..     440     576 ..     439     578 .. 0.90

  Alignments for each domain:
  == domain 1  score: -9.6 bits;  conditional E-value: 7
        DHHC  50 yFllfllylllllilalvlllialvklveeekkseflavtllkk..................................l 94 
                 +F +f+++++++++  +v++    + l+   + +       +++                                   
  KHJ33829.1 306 IFPVFIIWIMVMIVSHMVIFAGVPLALLAGYSLQWLAQQLFFYApsdmkkihltpwlagvfsgtlfliglnwlttilpE 384
                 2336777777777666664443333333333332222222222244455555566666666555555555555555442 PP

  == domain 2  score: 117.8 bits;  conditional E-value: 1.4e-37
        DHHC   2 ekelkfCstcniykpprskHcrvCnrcvlrfDHhCpwlnnciGerNykyFllfllylllllilalvlllialvklveeekkseflavtllkk......l 94 
                 ++e +fC+tc +++p rskHcr C+rcv+++DHhCpw+ nciG +N++yFll+ll+l l +i+ l +++ +++  + ++  s+ + + +  +       
  KHJ33829.1 440 FDEYNFCVTCMVRQPLRSKHCRLCRRCVAKHDHHCPWVFNCIGVNNHRYFLLYLLTLELGIIMLLKVTIGYFRLKLVNDASSSCYLLGKSLCkvvnldS 538
                 6899*************************************************************9999998876666666665555444446999999 PP

        DHHC  95 lsilllvlsllfllllgllllfhlylilrnlTtieamk 132
                 ++++l+ ++l+ l ++++l+ ++l++i+r++Tt+e+m+
  KHJ33829.1 539 YTLVLVSWALMQLTWVTMLISVQLVQISRGVTTWENMR 576
                 99*********************************996 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.0   3.8e-15   9.6e-12       2      83 .]      55     148 ..      54     148 .. 0.81
   2 !   44.1   0.0   9.3e-15   2.4e-11       1      78 [.     155     242 ..     155     247 .. 0.90

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 3.8e-15
       Ank_2   2 hlAakngnlelvklLl..egadpn..k.ngktaLhyAakngnleivklLleh...ad....ndgrtpLhyAarsghleivklLlekgadinlkd 83 
                 ++ a+ g+ + +k L    ++dp+  + +g t+Lh+Aa+n++  ++++Ll +   ++    ++  tp ++Aa+  h+ iv+lLle+gad+ ++d
  KHJ33829.1  55 MQLARIGDIQGIKRLYlrGSFDPSfcDeEGITPLHWAAINNQYAMCEFLLGEgvdVNkkggESVATPAMWAAQRCHYYIVNLLLENGADPFTTD 148
                 6667777777888885566688888647*************99*******8785644634444559******99***************98776 PP

  == domain 2  score: 44.1 bits;  conditional E-value: 9.3e-15
       Ank_2   1 LhlAakngnlelvklLl.egadpn..k.ngktaLhyAakngnleivklLle...h...adndgrtpLhyAarsghleivklLlekgad 78 
                 LhlA  +gn +l+ lLl +g d++  + +g+t L++Aa +g   +v l+l    +   ad++  t+Lh+A  +g++ +++ L+e+gad
  KHJ33829.1 155 LHLATFEGNIYLLVLLLhHGIDVDvpDgQGHTCLMWAAYKGFPLCVDLFLRwgaNvqaADETEFTALHWALVKGSQGCIQKLIEYGAD 242
                 89*****999999999989999998658*************999******866536678899************************98 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   4.5e-07    0.0012      13      43 ..      81     111 ..      78     117 .. 0.88
   2 !   21.3   0.1   9.6e-08   0.00025       6      56 .]     107     158 ..     105     158 .. 0.94
   3 !   16.7   0.0   2.7e-06    0.0069       1      36 [.     170     204 ..     170     212 .. 0.86
   4 !   28.0   0.0   7.3e-10   1.9e-06       7      56 .]     208     257 ..     204     257 .. 0.93

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 4.5e-07
       Ank_5  13 dgggntpLhvAakygaadvvrlLlargadln 43 
                 d++g tpLh+Aa ++   ++++Ll +g+d n
  KHJ33829.1  81 DEEGITPLHWAAINNQYAMCEFLLGEGVDVN 111
                 67788*******************8888876 PP

  == domain 2  score: 21.3 bits;  conditional E-value: 9.6e-08
       Ank_5   6 padvnrldgggn.tpLhvAakygaadvvrlLlargadlnltdsrGltaldlA 56 
                  +dvn + g+++ tp ++Aa + +  +v+lLl++gad+++td +G++ l+lA
  KHJ33829.1 107 GVDVNKKGGESVaTPAMWAAQRCHYYIVNLLLENGADPFTTDIQGYNILHLA 158
                 489999999999***********************************99998 PP

  == domain 3  score: 16.7 bits;  conditional E-value: 2.7e-06
       Ank_5   1 LlehgpadvnrldgggntpLhvAakygaadvvrlLl 36 
                 Ll+hg +dv+ +dg g t+L++Aa++g + +v l+l
  KHJ33829.1 170 LLHHG-IDVDVPDGQGHTCLMWAAYKGFPLCVDLFL 204
                 899**.99999999999**********998888888 PP

  == domain 4  score: 28.0 bits;  conditional E-value: 7.3e-10
       Ank_5   7 advnrldgggntpLhvAakygaadvvrlLlargadlnltdsrGltaldlA 56 
                 a+v++ d+  +t+Lh+A  +g++ ++++L+++gad+++++s+G+t+   A
  KHJ33829.1 208 ANVQAADETEFTALHWALVKGSQGCIQKLIEYGADRFAQTSSGKTPAITA 257
                 8999999***************************************8765 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   2.2e-07   0.00056       2      29 ..      84     112 ..      83     114 .. 0.86
   2 !   10.0   0.0   0.00039         1       4      31 ..     120     148 ..     119     149 .. 0.88
   3 !    7.9   0.2    0.0018       4.5       2      30 ..     151     180 ..     150     181 .. 0.87
   4 !   18.9   0.0   5.9e-07    0.0015       2      31 ..     184     214 ..     183     215 .. 0.89
   5 !   13.5   0.0     3e-05     0.078       3      31 ..     218     247 ..     216     248 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 2.2e-07
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTTC CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnlna 29 
                 G TPLH+Aa n++  ++++LL  G ++n 
  KHJ33829.1  84 GITPLHWAAINNQYAMCEFLLgEGVDVNK 112
                 99*******666688******889**997 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00039
                 BHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank   4 TPLHlAatngkkriiklLL.hGAnlnald 31 
                 TP ++Aa++ +  i+ lLL +GA++  +d
  KHJ33829.1 120 TPAMWAAQRCHYYIVNLLLeNGADPFTTD 148
                 889****889999******99***97666 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.0018
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTTCB CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnlnal 30 
                 G+  LHlA  +g+   + lLL hG +++  
  KHJ33829.1 151 GYNILHLATFEGNIYLLVLLLhHGIDVDVP 180
                 8999***999999999999**88*999876 PP

  == domain 4  score: 18.9 bits;  conditional E-value: 5.9e-07
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnlnald 31 
                 G+T+L++Aa+ g + ++ l+L  GAn++a d
  KHJ33829.1 184 GHTCLMWAAYKGFPLCVDLFLrWGANVQAAD 214
                 9********7777********55****9987 PP

  == domain 5  score: 13.5 bits;  conditional E-value: 3e-05
                 BBHHHHHH...HHTTHHHHHHHH.TTTSTTCBT CS
         Ank   3 nTPLHlAa...tngkkriiklLL.hGAnlnald 31 
                 +T+LH+A    + g   +i+ L+ +GA+  a++
  KHJ33829.1 218 FTALHWALvkgSQG---CIQKLIeYGADRFAQT 247
                 8*****98555455...******99***88876 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   6.8e-07    0.0017      19      55 .]      68     104 ..      58     113 .. 0.78
   2 !   23.0   0.1   3.5e-08     9e-05       3      48 ..     120     164 ..     119     165 .. 0.93
   3 !   21.6   0.1   9.2e-08   0.00024      11      55 .]     161     204 ..     157     204 .. 0.92
   4 !   11.2   0.0   0.00017      0.43       3      40 ..     219     255 ..     218     259 .. 0.91

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 6.8e-07
       Ank_4  19 lLlekg.adinaqdnrsGetalhiAakrgnveilklLl 55 
                 +L+ +g  d+  + +++G t+lh Aa ++++ + ++Ll
  KHJ33829.1  68 RLYLRGsFDPSFC-DEEGITPLHWAAINNQYAMCEFLL 104
                 5555533566556.999999999999999999999997 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 3.5e-08
       Ank_4   3 taLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAakrgnv 48 
                 t+  +aa+ +++ +v lLle+gad+  + +++G + lh A   gn+
  KHJ33829.1 120 TPAMWAAQRCHYYIVNLLLENGADPFTT-DIQGYNILHLATFEGNI 164
                 56679***********************.***********998885 PP

  == domain 3  score: 21.6 bits;  conditional E-value: 9.2e-08
       Ank_4  11 sgrlelvrlLlekgadinaqdnrsGetalhiAakrgnveilklLl 55 
                 +g++ l+ lLl +g+d++   +++G t+l  Aa++g++ ++ l+l
  KHJ33829.1 161 EGNIYLLVLLLHHGIDVDVP-DGQGHTCLMWAAYKGFPLCVDLFL 204
                 689999*************8.****************99988876 PP

  == domain 4  score: 11.2 bits;  conditional E-value: 0.00017
       Ank_4   3 taLhyaaisgrlelvrlLlekgadinaqdnrsGetalh 40 
                 taLh+a  +g   +++ L+e+gad  aq  +sG t+ +
  KHJ33829.1 219 TALHWALVKGSQGCIQKLIEYGADRFAQ-TSSGKTPAI 255
                 79**********************8888.888999865 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   1.7e-09   4.4e-06       1      30 [.      83     111 ..      83     112 .. 0.95
   2 !    9.7   0.0   0.00056       1.4       4      29 ..     120     144 ..     119     145 .. 0.93
   3 !    9.2   0.2   0.00082       2.1       2      30 ..     151     178 ..     150     179 .. 0.90
   4 !   12.5   0.0   6.8e-05      0.17       2      30 ..     184     211 ..     183     212 .. 0.93
   5 !    6.6   0.0    0.0057        15       4      28 ..     219     242 ..     217     243 .. 0.93

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 1.7e-09
       Ank_3   1 nGetpLhlAarsgnleivkfLlenkgadvn 30 
                 +G tpLh+Aa ++ +++++fLl   g+dvn
  KHJ33829.1  83 EGITPLHWAAINNQYAMCEFLLG-EGVDVN 111
                 599********************.8****9 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00056
       Ank_3   4 tpLhlAarsgnleivkfLlenkgadv 29 
                 tp ++Aa  +++ iv +Lle +gad+
  KHJ33829.1 120 TPAMWAAQRCHYYIVNLLLE-NGADP 144
                 9***********88******.8**97 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00082
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgadvn 30 
                 G+++LhlA   gn+ ++  Ll ++g+dv+
  KHJ33829.1 151 GYNILHLATFEGNI-YLLVLLLHHGIDVD 178
                 899***********.78888888****98 PP

  == domain 4  score: 12.5 bits;  conditional E-value: 6.8e-05
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgadvn 30 
                 G t L++Aa  g +  v+++l+ +ga+v 
  KHJ33829.1 184 GHTCLMWAAYKGFPLCVDLFLR-WGANVQ 211
                 89************99******.9**985 PP

  == domain 5  score: 6.6 bits;  conditional E-value: 0.0057
       Ank_3   4 tpLhlAarsgnleivkfLlenkgad 28 
                 t+Lh+A+  g+   ++ L+e +gad
  KHJ33829.1 219 TALHWALVKGSQGCIQKLIE-YGAD 242
                 9**********988******.9*98 PP

>> Baculo_11_kDa  Baculovirus 11 kDa family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   6.9   0.00073       1.9      25      55 ..     292     322 ..     288     329 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00073
  Baculo_11_kDa  25 lvsrNrsflrdFvLvicglvvfvvivlfilL 55 
                    +++ Nr+f++ F ++   +++ +++++   +
     KHJ33829.1 292 FIKNNRTFIKRFFFIFPVFIIWIMVMIVSHM 322
                    899*****************98887665443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (700 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 4848.46
//
Query:       KHJ33830.1  [L=461]
Description: putative xaa-pro dipeptidase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-53  180.9   0.0      3e-53  180.6   0.0    1.1  1  Peptidase_M24  Metallopeptidase family M24
    1.3e-22   79.8   0.0    3.1e-22   78.6   0.0    1.6  1  AMP_N          Aminopeptidase P, N-terminal domain


Domain annotation for each model (and alignments):
>> Peptidase_M24  Metallopeptidase family M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.6   0.0   3.4e-57     3e-53       2     209 .]     180     438 ..     179     438 .. 0.87

  Alignments for each domain:
  == domain 1  score: 180.6 bits;  conditional E-value: 3.4e-57
                    HHHHHHHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHTTTCEESSSSEEEEGGGGGSTTTBCSSSB--TTEEEEEEEEEEETTEEEEEEEEE. CS
  Peptidase_M24   2 lirkaariasaaleavleaikpgvterelaaeieattlkrhgarglafppivasgenaavlhytpndrvlkegdlvlidagaeydgyasDitrTv. 96 
                    l++ka+ i+ aa++a+++a k   +erel  ++ ++ ++  ga+++a++pivasg+ aa+lhy++nd++l ++  +l+dagaey++yasDitrT+ 
     KHJ33830.1 180 LMKKASTISVAAHHAAIKAAKFAQNERELLGIFLEK-CISLGAKEQAYSPIVASGTAAATLHYVKNDQPLSRKLNILLDAGAEYNCYASDITRTFp 274
                    7***************99999999**********88.***********************************999********************9 PP

                    ECSSGSHHHHHHHHHHHHHHHHHHHC-STTSBHHHHHHHHHHHHHHTTB...................CCGBSSCSEEEESSSSSEE..EEEESS. CS
  Peptidase_M24  97 lvGkftpeqrelyeavleaqeaaikavkpGvtlseidaaarevlesagl...................akffphglGHgvGlevhde..gpsvsr. 170
                    ++G+ftpe + +y++vle+q   i++++ +v +++++  a++++ ++ l                   ++ffphglGH +G+++hd    p++++ 
     KHJ33830.1 275 INGRFTPESKAVYDIVLEMQISSIQQLRKDVLWDQVHLGAHRIVIDG-LhklgifqgdktsiydartsVAFFPHGLGHYLGMDTHDTggHPNYNDe 369
                    999******************************************94.44445589999999***********************99553444436 PP

                    .......STTCSSB--TTBEEEEEEEEEEET............TT.............EEEEEBEEEEEES CS
  Peptidase_M24 171 .......esndgrkleeGmvftiEpgiyfap............ge.............ggvriedtvlvte 209
                           +   + kl  G v+t+Epg+yf               +             gg+ried vl+te
     KHJ33830.1 370 dpyfrylR--VRGKLPTGSVITVEPGLYFCRfiiepylanpihAKfintevlnkywevGGIRIEDNVLITE 438
                    66654322..5799**************5544444555555550055555666666769***********7 PP

>> AMP_N  Aminopeptidase P, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.6   0.0   3.5e-26   3.1e-22      14     111 ..      32     126 ..      15     135 .. 0.88

  Alignments for each domain:
  == domain 1  score: 78.6 bits;  conditional E-value: 3.5e-26
                 SSEEEEEE-----EEET.TEE------HHHHHHH----SS-EEEEEESSEEEE...EEEE----HHHHHHH----HHHHHHHHHT-SEEEEGGGHHHHH CS
       AMP_N  14 ensvvilaagkekyrsg.dveypFrqnsdFlYltGfnepdavlvlekeedkkehkstLfvprkdpekelWdGarlgleeakelfgvdeaepidelesal 111
                   ++++l+++k+k  ++ d e pFrq+++F+YltG+  pd++ ++    d+ ++ks+L++p+ +pe+ +W+G +l+  ea +l++vde++ +d  +++l
  KHJ33830.1  32 TAGIIYLEGQKTKLLEDnDGEAPFRQRRYFYYLTGCPLPDSYFTY----DIGSNKSVLYIPPVNPESVMWSGLPLSCTEALSLYDVDEVRTTDVAKDFL 126
                 4679*****************************************....88889*************************************99988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3501.99
//
Query:       KHJ33831.1  [L=291]
Description: putative signal recognition particle receptor beta subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.3e-33  114.6   0.7    1.3e-32  112.7   0.7    1.7  1  SRPRB        Signal recognition particle receptor beta subuni
    1.3e-08   34.5   0.3    1.5e-07   31.1   0.3    2.1  1  Arf          ADP-ribosylation factor family
    9.2e-06   25.7   0.0    1.6e-05   24.9   0.0    1.5  1  MMR_HSR1     50S ribosome-binding GTPase
    4.5e-05   22.9   0.0    8.5e-05   22.0   0.0    1.4  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
    0.00019   21.0   0.0    0.00041   19.9   0.0    1.6  1  GTP_EFTU     Elongation factor Tu GTP binding domain
     0.0013   18.3   0.9       0.81    9.3   0.4    2.2  2  cobW         CobW/HypB/UreG, nucleotide-binding domain
     0.0065   16.3   0.2      0.016   15.0   0.1    1.7  1  AAA_21       AAA domain, putative AbiEii toxin, Type IV TA sy
     0.0067   15.6   1.4        1.9    7.6   0.0    2.1  2  G-alpha      G-protein alpha subunit
  ------ inclusion threshold ------
       0.01   16.4   1.2      0.016   15.7   1.2    1.4  1  AAA_23       AAA domain
      0.014   15.6   0.0      0.026   14.8   0.0    1.4  1  AAA_22       AAA domain
      0.018   15.2   0.0      0.051   13.8   0.0    1.9  1  Roc          Ras of Complex, Roc, domain of DAPkinase
      0.043   13.6   0.1        3.4    7.4   0.0    2.3  2  ATP_bind_1   Conserved hypothetical ATP binding protein
      0.048   14.0   0.0      0.074   13.4   0.0    1.4  1  AAA_16       AAA ATPase domain
       0.14   12.8   0.1       0.28   11.7   0.1    1.6  1  AAA_18       AAA domain
        0.3   11.0   3.6       0.82    9.6   1.1    2.6  2  RsgA_GTPase  RsgA GTPase


Domain annotation for each model (and alignments):
>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.7   0.7   1.1e-35   1.3e-32       3     180 ..      50     261 ..      48     262 .. 0.84

  Alignments for each domain:
  == domain 1  score: 112.7 bits;  conditional E-value: 1.1e-35
                 --EEEEE-STTSSHHHHHHHHHHSS---B---SS-EEETTG.....................GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEE CS
       SRPRB   3 kpavllvGlsdsGKTslftrLttdsvkktvtSqessaalkv..................ksekgskltliDfPGheklrqklleklkaksslkglvfvv 83 
                  p+++l+G++ sGKTsl+t+L  ++  kt tSq ss+++ v                  + + + k+ l D PGh klr    ++l + +++kg++fvv
  KHJ33831.1  50 VPSFILLGPCGSGKTSLLTLLKLGQSSKTHTSQTSSTVELVlpndkvsgsdryrsindpSHHLNRKFLLTDTPGHGKLRPIAQKNLSTLQNIKGIIFVV 148
                 689******************************88887777788888999999999887778899********************************** PP

                 ETTS-HH...HHHHHHHHHHHHHHHHHHHTT......---EEEEEE-TTSTT---HHHHHHHHHHHHHHHHHCHHHHHH--........----T....T CS
       SRPRB  84 DStidpk...evkevAEllyeilliteklkd......avdiliACnKqelflakspklikdaLEkElnkiierrskalkel........deeedksavl 165
                 D++  +     ++++AE+lye+ll  +k+ +        ++liA nK +lf+a +++li+++LE+E+ k++ ++   l+          d+e+d    l
  KHJ33831.1 149 DASRLKNgddYLRSTAEYLYEVLLLLKKKAEesnylkVTSVLIAANKMDLFTALPKELIQNNLESEISKLRISKIYGLQDSgaaeeiglDDEKD--EWL 245
                 *98654322269**********9988776441222224689*********************************99999988898887765555..567 PP

                 ----.----GGGSSS- CS
       SRPRB 166 akkg.kdFkfdqleak 180
                 +++g ++F+f++l ++
  KHJ33831.1 246 GENGsEKFQFSHLRES 261
                 7765167*****9875 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.3   1.2e-10   1.5e-07      17     167 ..      53     240 ..      38     248 .. 0.72

  Alignments for each domain:
  == domain 1  score: 31.1 bits;  conditional E-value: 1.2e-10
                 EEEEESTTSSHHHHHHHHHHSSCEECSSSSSEEEEEEEE....................TTEEEEEEEE-SSGGGGGGGGGG...CTTESEEEEEEETT CS
         Arf  17 illlGLDnaGKtTilkklkleelvttvPTigfnveelei....................knlkftvwDvGGqeklRplWknY...fektdavifvvDsa 92 
                  +llG  ++GKt +l+ lkl++ ++t   + + + el                       n kf + D  G+ klRp+ ++    +++++++ifvvD++
  KHJ33831.1  53 FILLGPCGSGKTSLLTLLKLGQSSKTHTSQTSSTVELVLpndkvsgsdryrsindpshhLNRKFLLTDTPGHGKLRPIAQKNlstLQNIKGIIFVVDAS 151
                 678999999999999999999988766555544444444577888899999999998878899***************987622257899*******99 PP

                 -CT....THHHHHHHHHHHC...TSGCCT.....TSEEEEEEE-TTSTTSS-HHHHHHHTT..GGGSSSSSSEEEEEEBTTTTBTHHHH CS
         Arf  93 dre....RleeakeeLkall...eeeelk.....evallvlaNKqDlpealseeelrellg..leelkgkrkleiqkcsavkgeglkeg 167
                   +     l+++ e L ++l   +++  +        +l+ aNK+Dl +al +e ++++l+  +++l+ ++   +q + a +  gl++ 
  KHJ33831.1 152 RLKngddYLRSTAEYLYEVLlllKKKAEEsnylkVTSVLIAANKMDLFTALPKELIQNNLEseISKLRISKIYGLQDSGAAEEIGLDDE 240
                 76533335667777666543222433222233426789********************9972245677777788888888888888654 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.0   1.4e-08   1.6e-05       3     101 ..      54     164 ..      52     195 .. 0.59

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 1.4e-08
                 EEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEE..ET...............TEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEE CS
    MMR_HSR1   3 aivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvk..lk...............gkeielvDtpGliegaseekglgkaflaleeadlillvvd 84 
                 +++G   +GK++L+  l   ++  +++ +t  +++    +  ++               ++++ l+DtpG     + +   +k++  l++ + i++vvd
  KHJ33831.1  54 ILLGPCGSGKTSLLTLLKLGQSSKTHTSQTSSTVELVLPNdkVSgsdryrsindpshhlNRKFLLTDTPG-HG--KLRPIAQKNLSTLQNIKGIIFVVD 149
                 689999*********99665555556666655555554332211223333333444443456********.43..2333556666666679******** PP

                 TTTTCSHHHHHHHHHHH CS
    MMR_HSR1  85 aseeklkpldeeleell 101
                 as + lk+ d  l ++ 
  KHJ33831.1 150 AS-R-LKNGDDYLRSTA 164
                 88.2.444443333332 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   7.1e-08   8.5e-05       3     142 ..      54     217 ..      52     229 .. 0.76

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 7.1e-08
   Gtr1_RagA   3 LLmGksgsGKtsmrsii.Fdnylardtlrlgati................dveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVf 84 
                 +L+G+ gsGKts+   +   + + ++t +  +t+                +++  +   + n ++ l D +G  ++      +++ + ++n++ +i+V+
  KHJ33831.1  54 ILLGPCGSGKTSLLTLLkLGQSSKTHTSQTSSTVelvlpndkvsgsdryrSINDPSH--HLNRKFLLTDTPGHGKLRPI--AQKNLSTLQNIKGIIFVV 148
                 799**********99983455666788888999999*****9999987654444333..34568889******998765..5888899*********** PP

   Gtr1_RagA  85 Dve.....sre.leedletlkeilealrqyspe...akv.fvli..hKmDliqedereeifeerkeeire 142
                 D++     + + l+++ e+l e+l  l++  +e   +kv  vli  +KmDl +   +e i+++ ++ei++
  KHJ33831.1 149 DASrlkngD-DyLRSTAEYLYEVLLLLKKKAEEsnyLKVtSVLIaaNKMDLFTALPKELIQNNLESEISK 217
                 **9665432.3478888888888877766544411145523565448**************999999976 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   3.5e-07   0.00041       3     150 ..      50     215 ..      48     264 .. 0.65

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 3.5e-07
                 EEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHST...HCHSH.HHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGG...GHHHHHHHHHT- CS
    GTP_EFTU   3 irnigiighvDhGKtTLtdrLlyktgaiskkgekaeeerv...lDtlk.eErergiTiksaaisleketkkylinliDtPGHvd...Fskevirglrvl 94 
                 +  ++++g + +GKt+L+  L    g+ sk ++ +++++v   l + k     r  +i+    +l+     +++ l DtPGH +     ++   +l+ +
  KHJ33831.1  50 VPSFILLGPCGSGKTSLLTLLKL--GQSSKTHTSQTSSTVelvLPNDKvSGSDRYRSINDPSHHLN-----RKFLLTDTPGHGKlrpIAQKNLSTLQNI 141
                 667899999********987754..44444334443333322244433134566667776666666.....99*********99332455666679999 PP

                 SEEEEEEETT...TB.............STHHHHHHHHHHHHTTTE.EEEEEESCGSTHHHHHHHHH.HHHHHH CS
    GTP_EFTU  95 Dgavlvvdav...eG.............vepqteevlrlalkegvp.iivfiNKmDrlkaelkeive.evkqkl 150
                  g ++vvda+   +G             v    ++ ++  + ++v  + ++ NKmD   a  ke+++ ++++++
  KHJ33831.1 142 KGIIFVVDASrlkNGddylrstaeylyeVLLLLKKKAEESNYLKVTsVLIAANKMDLFTALPKELIQnNLESEI 215
                 9********977633666666555555577777777777777888889999*******5555554330334333 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.4   0.00067      0.81       3      20 ..      53      70 ..      51      87 .. 0.80
   2 !    7.6   0.0    0.0022       2.7     103     156 ..     132     202 ..     104     221 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00067
                EEEEESTTCCHHHHHHHH CS
        cobW  3 tvltGflGsGKTtLlnhl 20
                ++l G+ GsGKT+Ll+ l
  KHJ33831.1 53 FILLGPCGSGKTSLLTLL 70
                7899**********9765 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0022
                 SHHHHHCCCECEEEEEEETTTH.....................CCHCCHHHHHHHHHHTSSEEE.EE-HHHHCHC CS
        cobW 103 eeelksdltldavvavvDaknl....................eaeeekieekaedqlaaadllv.lnKtDlldee 156
                 +++l++  +++++++vvDa++l                         k++ +  + l+++++l+  nK+Dl ++ 
  KHJ33831.1 132 QKNLSTLQNIKGIIFVVDASRLkngddylrstaeylyevlllL----KKKAEESNYLKVTSVLIaANKMDLFTAL 202
                 5778888899************999999999999998875431....3333333445555544426999998876 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   1.3e-05     0.016       3      69 ..      54     120 ..      52     159 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.3e-05
      AAA_21   3 vliGpNgsGKSnLLdaldllarldrdvegltdelsggggirkipslldlydpeipfefeieeflsqg 69 
                 +l Gp gsGK++LL +l+l ++  ++  ++ ++     +++k++++ + ++++ p+ +  ++fl+++
  KHJ33831.1  54 ILLGPCGSGKTSLLTLLKLGQSSKTHTSQTSSTVELVLPNDKVSGSDRYRSINDPSHHLNRKFLLTD 120
                 899******************9988888888888888888888888888888888887777777666 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.3    0.0024       2.9      23      55 ..      50      82 ..      42      97 .. 0.74
   2 !    7.6   0.0    0.0016       1.9     203     283 ..     115     200 ..     101     212 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0024
                EEEEEEEESTTSSHHHHHHHHHHHCS----HHH CS
     G-alpha 23 evkllllGqseSGKsTilkqlkllykkgfseee 55
                  +++llG  +SGK+++l  lkl    + ++++
  KHJ33831.1 50 VPSFILLGPCGSGKTSLLTLLKLGQSSKTHTSQ 82
                44799**************99977755544443 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0016
                 EEEEEEE-SSHHHH...HGTCCCTTTECEEEEEEEGGGTT-.B-SS-TTSBHHHHHHHHHHCCCC-.GGGTTSEEEEEEE-HHHHH CS
     G-alpha 203 efrivdvgGqrser...kkWvpffddvdaiiFlvslsefdq.vlyedekvnrleeslklFkeicnn.kllkntpiiLflnKlDile 283
                 +f + d+ G+ + r   +k ++ +++++ iiF+v  s       y  ++   l e l l k+  ++ ++lk t++++  nK+D++ 
  KHJ33831.1 115 KFLLTDTPGHGKLRpiaQKNLSTLQNIKGIIFVVDASRLKNgDDYLRSTAEYLYEVLLLLKKKAEEsNYLKVTSVLIAANKMDLFT 200
                 556666666666652224556778************99954344555689999*******9998873666899999999*****97 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.7   1.2   1.3e-05     0.016      20     152 ..      51     216 ..      32     269 .. 0.54

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.3e-05
      AAA_23  20 gltlItGpNGaGKTTildAiklaLygetprlsrks................grgfeksdveiese.........gkvkayvelt.........fenkdg 84 
                 + +++ Gp G+GKT++l  +kl+   +t++  ++s                +r++++ + +++ +         gk       +         ++n++g
  KHJ33831.1  51 PSFILLGPCGSGKTSLLTLLKLGQSSKTHTSQTSStvelvlpndkvsgsdrYRSINDPSHHLNRKflltdtpghGKL------RpiaqknlstLQNIKG 143
                 6799*********************9999888887777777776655554433333333333333666444443333......2223333334444444 PP

      AAA_23  85 rytrsiererelskkkgkttkkaklellei....deleqfisellgskki.....ilnlilflgqerfeefelkdkk 152
                 +   ++  + ++ k+  ++ + +++ l e+    + ++ + s++l+++        ++l+  l++e  +++++++ +
  KHJ33831.1 144 I---IFVVDASRLKNGDDYLRSTAEYLYEVllllK-KKAEESNYLKVTSVliaanKMDLFTALPKELIQNNLESEIS 216
                 3...3334444444444444444433333343321.11111112222211222224444444554444444444433 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   2.2e-05     0.026       8      71 ..      53     120 ..      47     175 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.2e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst.sskdllrellralglelka....e 71 
                  ++ G+ G+GKT ll  l+      + ++ + +++v+  lp+++ s +d +r +    ++ + +     
  KHJ33831.1  53 FILLGPCGSGKTSLLTLLKLGQ-SSKTHTSQTSSTVELVLPNDKvSGSDRYRSINDPSHHLNRKflltD 120
                 6899****************97.5667777899999999998888999999998876665555555553 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   4.3e-05     0.051       3     105 ..      54     166 ..      52     198 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 4.3e-05
                 EEESSTTSSHHHHHHCHCT-CCC-E....EETTTTEEEEEEECGGSG...GCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHH...CTSCEEEEEEEGHH CS
         Roc   3 vlvGdsgvGKtsllkrfvedkfsek....ekstigvdfltkevtkik...gvendkkvkkvklniWDtaGqerfrslhplyl...reaalailvydsrs 91 
                 +l+G  g+GKtsll+ +  ++ s++    ++st+ + + + +v+  +   ++++ ++  + k+ + Dt G+ + r +++  l   ++ + +i+v+d+++
  KHJ33831.1  54 ILLGPCGSGKTSLLTLLKLGQSSKThtsqTSSTVELVLPNDKVSGSDryrSINDPSHHLNRKFLLTDTPGHGKLRPIAQKNLstlQNIKGIIFVVDASR 152
                 89************9988766655411004455555555555543331113333333344678888999999888887755411156677888888777 PP

                 HHCHHHHHHHHHHH CS
         Roc  92 senlkeWlkelkkv 105
                  +n +++l++  ++
  KHJ33831.1 153 LKNGDDYLRSTAEY 166
                 77766666666555 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.1      0.03        36       2      16 ..      56      70 ..      55      89 .. 0.81
   2 ?    7.4   0.0    0.0029       3.4      89     145 ..     111     163 ..      98     226 .. 0.68

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.03
  ATP_bind_1  2 vGpaGsGKttfvgal 16
                +Gp GsGKt++   l
  KHJ33831.1 56 LGPCGSGKTSLLTLL 70
                7*********98755 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0029
  ATP_bind_1  89 e.eddyllfDtPGQielfthseslakiveeLesefalvvvyLvDsqrltdptkfisgl 145
                 + ++++ll DtPG  +l  + ++    +++       +++++vD+ rl++  +++ ++
  KHJ33831.1 111 HlNRKFLLTDTPGHGKLRPIAQKNLSTLQN-----IKGIIFVVDASRLKNGDDYLRST 163
                 337799*******99998877766634444.....4589***********66666542 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   6.2e-05     0.074      20      45 ..      45      71 ..      36     140 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 6.2e-05
      AAA_16 20 rsgrp.elvllsGesGvGKsslvrell 45
                + + + ++ +l G+ G+GK+sl++ l+
  KHJ33831.1 45 SGNKTvPSFILLGPCGSGKTSLLTLLK 71
                33444799***************8876 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   0.00023      0.28       2      43 ..      54      95 ..      54     176 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00023
      AAA_18  2 lltGtpGvGKttlakeLskrlgf.gvnlrdvakenglllevdp 43
                +l G++G+GKt+l   L k++++  ++ +++ +  +l+l++d+
  KHJ33831.1 54 ILLGPCGSGKTSLLTLL-KLGQSsKTHTSQTSSTVELVLPNDK 95
                689**************.3332232333333333333333333 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   1.1   0.00069      0.82     102     132 ..      53      85 ..      47     128 .. 0.71
   2 ?    0.4   0.1      0.44   5.2e+02      48      63 ..     188     203 ..     162     229 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00069
                  EEEECSTTSSHHHHHHHHCTT-..----S---- CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpel..elktgevse 132
                   +l+G+ G GK++L+  l+  +  +++t+++s+
   KHJ33831.1  53 FILLGPCGSGKTSLLTLLKLGQssKTHTSQTSS 85 
                  589*************99875411444444444 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.44
                  EEEEEEE-GGG--HHH CS
  RsgA_GTPase  48 epvivlnKiDlleeee 63 
                  +++i+ nK+Dl +   
   KHJ33831.1 188 SVLIAANKMDLFTALP 203
                  6789999999998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (291 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.38
# Mc/sec: 2285.34
//
Query:       KHJ33832.1  [L=259]
Description: putative beta-glucan boisynthesis protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.6e-17   62.1   5.2    6.6e-17   62.1   5.2    1.8  2  KRE9          Yeast cell wall synthesis protein KRE9/KNH1
    8.5e-15   55.3   0.7    8.5e-15   55.3   0.7    2.1  2  GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anc
  ------ inclusion threshold ------
      0.024   15.4   2.9      0.024   15.4   2.9    2.3  2  Big_7         Bacterial Ig domain


Domain annotation for each model (and alignments):
>> KRE9  Yeast cell wall synthesis protein KRE9/KNH1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.3       1.3     8e+03      57      69 ..      38      50 ..      32      85 .. 0.66
   2 !   62.1   5.2   1.1e-20   6.6e-17       5      82 ..     171     248 ..     168     256 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.3
        KRE9 57 tTiTpgwsytlts 69
                tT T +w  +  s
  KHJ33832.1 38 TTFTVTWAESGDS 50
                5666666555444 PP

  == domain 2  score: 62.1 bits;  conditional E-value: 1.1e-20
        KRE9   5 ftvpYtkQtgktrfAPmQtqPgtkvtattwsrrfptsavtyystlkksleqltTiTpgwsytltsavNyatpapfpse 82 
                 + +pY+ Q+g t++APmQ  P t +tat+ +  +pts+v + +tl + ++q+tT T++ + ++ s++N+a+pa++p++
  KHJ33832.1 171 WDIPYNLQSGLTKYAPMQPIPPTAITATNTKALWPTSSVEFAKTLMPIPSQITTFTQSQTFSVLSHANTAAPASQPTN 248
                 89**************************************************************************97 PP

>> GPI-anchored  Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.3   0.7   1.4e-18   8.5e-15       1      93 []      26     127 ..      26     127 .. 0.90
   2 ?    0.6   0.1      0.16   9.6e+02      41      65 ..     212     236 ..     198     242 .. 0.76

  Alignments for each domain:
  == domain 1  score: 55.3 bits;  conditional E-value: 1.4e-18
  GPI-anchored   1 tsPssgevvtagkpvtitWkdsg.....tdpgtvtlvLcagssnnlksvktiasgiknsdgsytwtvpaslesgg..aYflqiv.sesne.giynyS 88 
                   tsP++g+++  g+++t+tW++sg     td  +++l L++gs++n++++ +ia+g  ++d s ++t+p +++  +  aYfl +v +  ++ +i+ +S
    KHJ33832.1  26 TSPAAGASIGGGTTFTVTWAESGdspmiTDLNSYELFLYTGSNTNPQQLYSIAKGDYTADYSLSVTIPVTIGGPTvnAYFLGLVsTAIKGgTITSFS 122
                   79********************977777777*****************************999999999776665447******77777799***** PP

  GPI-anchored  89 drFti 93 
                   drFt+
    KHJ33832.1 123 DRFTL 127
                   ***96 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.16
  GPI-anchored  41 lksvktiasgiknsdgsytwtvpas 65 
                    k++++i s+i++ ++s t++v ++
    KHJ33832.1 212 AKTLMPIPSQITTFTQSQTFSVLSH 236
                   5677888888888888888887655 PP

>> Big_7  Bacterial Ig domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   2.9     4e-06     0.024       4      59 ..      24      93 ..      24     119 .. 0.82
   2 ?   -3.3   0.1       2.8   1.7e+04       8      21 ..     219     233 ..     218     241 .. 0.60

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4e-06
                EEEE--TT--EB.TSEEEEEEEEE-S....S-EEEEEEEETTEE..........EEEE-SSSEEEEEE-- CS
       Big_7  4 titsPangatvs.ggtvtisasAsdd....ggvskVefyvdgtl.g........lgtdtsapysltwttt 59
                +itsPa+ga++  g+t+t++   s d    +  ++ e+++++ + +           d +a ysl++t++
  KHJ33832.1 24 QITSPAAGASIGgGTTFTVTWAESGDspmiTDLNSYELFLYTGSnTnpqqlysiAKGDYTADYSLSVTIP 93
                59**********999*****77766667777779999999977755788999988899999999999996 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.8
                 --TT--EB.TSEEEE CS
       Big_7   8 Pangatvs.ggtvti 21 
                 P+  +t++ ++t+++
  KHJ33832.1 219 PSQITTFTqSQTFSV 233
                 555567775555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1964.77
//
Query:       KHJ33833.1  [L=138]
Description: hypothetical protein EV44_g3382 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       951  (0.0530426); expected 358.6 (0.02)
Passed bias filter:                      641  (0.0357521); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1031.88
//
Query:       KHJ33834.1  [L=550]
Description: putative glycosyl hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-86  290.7   0.0    2.3e-86  290.4   0.0    1.1  1  Glyco_hydro_20   Glycosyl hydrolase family 20, catalytic doma
    3.4e-24   86.0   0.1    1.2e-23   84.3   0.1    1.9  2  Glycohydro_20b2  beta-acetyl hexosaminidase like
    3.4e-05   24.6   0.1    7.2e-05   23.6   0.1    1.5  1  Glyco_hydro_20b  Glycosyl hydrolase family 20, domain 2
  ------ inclusion threshold ------
       0.17   12.2   0.0       0.37   11.1   0.0    1.5  1  RGI_lyase        Rhamnogalacturonan I lyases beta-sheet domai


Domain annotation for each model (and alignments):
>> Glyco_hydro_20  Glycosyl hydrolase family 20, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  290.4   0.0   5.2e-90   2.3e-86       1     353 [.     161     500 ..     161     501 .. 0.95

  Alignments for each domain:
  == domain 1  score: 290.4 bits;  conditional E-value: 5.2e-90
  Glyco_hydro_20   1 fkyRGlmlDvaRhflsveeikrliDamaaaKlNvlHwHltDdqgwrleikkyPeLtekgakreskeseeelsgfYtkedireiveYAaergieVi 95 
                     f++RGl lDvaR +++v++i+++iDa+a++K+N+lH+H+tD+q+w+lei+++PeL+ekga+ +           Y+ +d+  i +++ +rg+eVi
      KHJ33834.1 161 FPHRGLNLDVARSWFPVKSILNMIDALAINKFNRLHLHITDSQSWPLEIQSMPELAEKGAYMTGL--------SYSANDLTRIHDHGLRRGVEVI 247
                     9*************************************************************966........9********************* PP

  Glyco_hydro_20  96 pEidmPgHaraalkaypelvtkekaeqsveqsvqvevkesvlnptneetyeflekvldevaelfp..seyvHiGGDEvkkkqwkkspeiqalike 188
                      E+dmPgH++++  aypel+++  a++ ++  +++e++++ l+ +++ + +f+ek+l +++   +  s+y+H+GGDEv+k+ +  ++ +q    +
      KHJ33834.1 248 LEVDMPGHTTSIGYAYPELIAG-FAATPWY-TYCAEPPCGSLKLNSPAVTSFVEKMLADIIPRVSpySAYFHTGGDEVNKNVYLLDETVQ----S 336
                     **********************.5667788.89****************************998889*******************9999....8 PP

  Glyco_hydro_20 189 eglksveelqsyfvkrvekilkekgkkligWdeilekgkasklakknttvqsWrelekeaaeklakkgydvilspadalYlDfgqekkeeeegle 283
                     ++++ ++ l + fv+r +++l++ g ++i+W+e++ +++   ++ ++++vq+W +   e + k+++kg +v   +++ +YlD+g +++ + ++  
      KHJ33834.1 337 NDTSILTPLLQNFVSRNHDQLRKSGITPIVWEEMALDWN--LTLGSDVIVQVWLS--SESIAKVTSKGLKVLAGDYKNWYLDCGLGQWLNIDN-- 425
                     8999**********************************9..999999********..679**************************9997554.. PP

  Glyco_hydro_20 284 iatfaslekvynyepvakeaas.......tslseeekkkkilGveaalWtEvirdsaeleyrvfPRlaalAErlWsk 353
                      ++f+++  +++y++++k+++          ++ee++ +++lG+e+ +W+E++ d+ +le++v+PR+aa+ E+lWs+
      KHJ33834.1 426 GKSFQKYYPFVDYCAPHKNWRLiyaydplSGIPEEQH-NLVLGGEVHIWAEQV-DPVNLETMVWPRAAAAGEVLWSG 500
                     6789***************998999988556666665.6**************.*********************96 PP

>> Glycohydro_20b2  beta-acetyl hexosaminidase like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.3   0.1   2.6e-27   1.2e-23       9     137 .]       2     136 ..       1     136 [. 0.89
   2 ?   -1.5   0.0      0.81   3.6e+03      29      58 ..     337     366 ..     311     399 .. 0.76

  Alignments for each domain:
  == domain 1  score: 84.3 bits;  conditional E-value: 2.6e-27
  Glycohydro_20b2   9 tigsktlrlspsnfrlkvesaa..sea.....veellheafdrtlkelfkskvvpwakeprn..skfepkvstavskkkediktvevsltseks 93 
                      t gs++l++ +++ ++++ +++  +++     +  ++ ea+ rt+k++f +++vpw+ +prn  s+fep+      + +  i++v +++t++++
       KHJ33834.1   2 TVGSSPLWITNNVSFTYHPGSStyFSRiskinSLIIINEAIARTRKNIFLQNFVPWKLHPRNtiSEFEPDA----HTSRIYISQVIITQTDTDN 91 
                      67999******9999998777744333999888889**************************999999974....7777789*********996 PP

  Glycohydro_20b2  94 e..aeeltlevdEsYtLsvksasgsakisansvlGalhGLeTlqQL 137
                      e  +++l+++vdEsYt+s+ s++g+ +i+a s+ G+l +Le+++QL
       KHJ33834.1  92 EtaFRPLAGQVDESYTISI-SDNGTSEITAASYHGVLYALESFSQL 136
                      65446**************.9999*********************9 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.81
  Glycohydro_20b2  29 aaseaveellheafdrtlkelfkskvvpwa 58 
                      ++ +    ll++ ++r  ++l+ks  +p++
       KHJ33834.1 337 NDTSILTPLLQNFVSRNHDQLRKSGITPIV 366
                      233336688999999999999998888876 PP

>> Glyco_hydro_20b  Glycosyl hydrolase family 20, domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.1   1.6e-08   7.2e-05      53     123 ..      85     157 ..      63     158 .. 0.80

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 1.6e-08
  Glyco_hydro_20b  53 teakepgkgdirllalkdaelgaEgYrLavded.titiegkdtdGlfyGvqTLrqllpqaagg.....tlpaveirD 123
                      t++++++++++r      a+  +E+Y++++  + t  i++++  G++y+++++ ql+ q+ +g      l+ v+i D
       KHJ33834.1  85 TQTDTDNETAFRP----LAGQVDESYTISISDNgTSEITAASYHGVLYALESFSQLFYQHSSGtgfytNLAPVKIVD 157
                      3555556666663....47899*******98776999**********************976667777888888877 PP

>> RGI_lyase  Rhamnogalacturonan I lyases beta-sheet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   8.2e-05      0.37      19      77 ..      53     117 ..      42     124 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.2e-05
                 EEEE--B-TTS......-TT-EEEEEETTEE-CSSSB-SSSEEEETT--TT-EEEEEEEETTEEE CS
   RGI_lyase  19 vfvsWRllgte......eeevaFnvYrdgkkinsapitdstnylDakgtasskYtvkavvngkeq 77 
                 +fv W+l   +      +++ + ++Y   + i+++   ++t +   +g+ +++Yt++   ng+++
  KHJ33834.1  53 NFVPWKLHPRNtisefePDAHTSRIYISQVIITQTDTDNETAFRPLAGQVDESYTISISDNGTSE 117
                 688888887776666767888899*********************************99999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (550 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       287  (0.0160076); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3878.10
//
Query:       KHJ33835.1  [L=436]
Description: hypothetical protein EV44_g3268 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00012   22.0   0.4     0.0002   21.3   0.4    1.4  1  zf-CCHC     Zinc knuckle
    0.00046   20.1   1.0     0.0011   18.9   1.0    1.6  1  zf-CCHC_3   Zinc knuckle
  ------ inclusion threshold ------
      0.014   15.4   0.5      0.034   14.2   0.5    1.6  1  U3_assoc_6  U3 small nucleolar RNA-associated protein 6


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.4   3.4e-08    0.0002       2      18 .]     391     407 ..     390     407 .. 0.94

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 3.4e-08
                 CTSSSSSSSSTTTTSTS CS
     zf-CCHC   2 kCynCGepGHiardCpk 18 
                 +CynCG+  H++ +C+k
  KHJ33835.1 391 VCYNCGKLDHFSLECKK 407
                 6**************96 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   1.0   1.8e-07    0.0011       1      27 [.     386     410 ..     386     420 .. 0.84

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1.8e-07
   zf-CCHC_3   1 anasaaCQkClkkGHwtYECknagerk 27 
                 ana+a+C +C+k +H++ ECk  ++rk
  KHJ33835.1 386 ANAQAVCYNCGKLDHFSLECK--KSRK 410
                 699******************..6553 PP

>> U3_assoc_6  U3 small nucleolar RNA-associated protein 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.5   5.6e-06     0.034       6      46 ..       2      42 ..       1      48 [. 0.90

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.6e-06
  U3_assoc_6  6 peledleekglFtkeEikeIvkkrrkfEyklqrrgkkkedf 46
                 el+++   ++ t eEi++I++k ++ E +l++r  k e+ 
  KHJ33835.1  2 TELKKFNSQHIKTMEEISAIADKVNNIESALNSRIVKVEQA 42
                699*******************************9988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 2888.28
//
Query:       KHJ33836.1  [L=539]
Description: hypothetical protein EV44_g2738 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-13   51.3   2.6    2.4e-13   50.1   2.6    1.6  1  MBOAT_2   Membrane bound O-acyl transferase family


Domain annotation for each model (and alignments):
>> MBOAT_2  Membrane bound O-acyl transferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   2.6   1.3e-17   2.4e-13       3      82 ..     350     436 ..     348     437 .. 0.79

  Alignments for each domain:
  == domain 1  score: 50.1 bits;  conditional E-value: 1.3e-17
     MBOAT_2   3 plfgsllea..yslrrfWgrfWHqlfrrglkstakkilrlllgsk...larylqllvaFllSGllHaagdytqlapest..allfFl 82 
                 ++ g+++     +l+++Wg  WHq+fr ++++++k++++    +     ++++ l++aF+lSG+lH ag++t ++++s   +  fF+
  KHJ33836.1 350 DVLGKFSHIfdKGLNGLWGNYWHQTFRLFFTAPTKYLIQEGYIKAgnySTKIIGLFFAFSLSGFLHWAGSMTSFGSTSPiqEATFFI 436
                 5566665442269************************9997773344689*************************633356666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (539 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3852.84
//
Query:       KHJ33837.1  [L=334]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1149  (0.0640861); expected 358.6 (0.02)
Passed bias filter:                      666  (0.0371465); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 2501.23
//
Query:       KHJ33838.1  [L=316]
Description: putative myb dna-binding domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-13   50.6   4.2    6.1e-11   42.3   0.1    2.5  2  Myb_DNA-binding  Myb-like DNA-binding domain
    3.6e-06   27.1   4.1    0.00056   20.1   0.2    2.4  2  Myb_DNA-bind_6   Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.3   0.1   6.9e-15   6.1e-11       2      46 .]      20      63 ..      19      63 .. 0.93
   2 !    8.9   1.2   0.00019       1.7       1      30 [.      66      96 ..      66     105 .. 0.89

  Alignments for each domain:
  == domain 1  score: 42.3 bits;  conditional E-value: 6.9e-15
                     SSSBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 gkWteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwrnyl 46
                     +kW++eEd l++e+  ++  +W+ I++rl+gR++ +cr++++nyl
       KHJ33838.1 20 SKWSPEEDSLIIELRGRQM-KWEDISKRLPGRSAISCRLHYQNYL 63
                     69************97755.8***********************7 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00019
                     CSSSBHHHHHHHHHHHHHHT.TCHHHHHHHH CS
  Myb_DNA-binding  1 rgkWteeEdelLleavkkhG.nrWkkIaerl 30
                     r++W ee  ++L++  +++  + W+k+ae+l
       KHJ33838.1 66 RSEWDEERKNKLARIYERFKpEMWAKVAEEL 96
                     789*****************888******76 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.2   6.3e-08   0.00056       1      44 [.      22      64 ..      22      68 .. 0.91
   2 !    8.1   0.5   0.00035       3.2       1      28 [.      69      97 ..      69     111 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 6.3e-08
  Myb_DNA-bind_6  1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwknkLr 44
                    W++eEd ++++l  ++  +W+ I++ l+ R++ +c+ +++n L 
      KHJ33838.1 22 WSPEEDSLIIELRGRQ-MKWEDISKRLPGRSAISCRLHYQNYLE 64
                    *************999.89********55************874 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00035
  Myb_DNA-bind_6  1 WteeEdeiLlklvekygn.dWknIaealn 28
                    W+ee + +L++++e++    W ++ae+l+
      KHJ33838.1 69 WDEERKNKLARIYERFKPeMWAKVAEELA 97
                    9***************9637*******97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       871  (0.0485805); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2394.01
//
Query:       KHJ33839.1  [L=552]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
        8.9    5.9   9.6    1.2e+02    2.3   9.6    2.5  1  zf-ribbon_3  zinc-ribbon domain


Domain annotation for each model (and alignments):
>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   9.6    0.0065   1.2e+02       4      25 ..     439     465 ..     438     465 .. 0.80

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.0065
  zf-ribbon_3   4 rCPnCGa.plssddnv.....CpyCGtk 25 
                  +C  CG+ + +s+d++     C +CG++
   KHJ33839.1 439 SCDICGStN-DSGDTCmaatkCRNCGGP 465
                  6********.***96444444*****85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (552 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1228  (0.0684924); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.21s 00:00:00.76 Elapsed: 00:00:00.36
# Mc/sec: 4624.70
//
Query:       KHJ33840.1  [L=321]
Description: putative carnitine acyl carnitine carrier [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-54  181.0   2.6    3.2e-19   68.6   0.0    3.3  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.4   0.0   9.9e-19   1.8e-14       5      80 ..      12      84 ..       8      90 .. 0.91
   2 !   68.6   0.0   1.8e-23   3.2e-19       3      93 ..     124     218 ..     122     221 .. 0.90
   3 !   57.7   0.1   4.7e-20   8.5e-16       5      96 ..     234     319 ..     230     320 .. 0.93

  Alignments for each domain:
  == domain 1  score: 53.4 bits;  conditional E-value: 9.9e-19
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHH.HGGGTTHHHHHHHHHHHHH CS
   Mito_carr  5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGl.rglyrGllpnllrvapasa 80
                 l++l+aGg++g++a++v +P+d+vK+rlqt+++    +     +dv+++ + ++Gl rgly G+++ l++v+p  +
  KHJ33840.1 12 GLRSLVAGGFGGVCAVIVGHPFDLVKVRLQTAERGFYRN----SIDVVRRSIAKDGLwRGLYAGVSAPLVGVTPMCS 84
                5799******************************98764....7************99***************9876 PP

  == domain 2  score: 68.6 bits;  conditional E-value: 1.8e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS....HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa....ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                  sv++  +aG ++++  tlvt+P+++vK+ lq+q++++ + + ++     ldv++k+yke G+r+ +rG  ++l r  p sa +f++ye++kr l
  KHJ33840.1 124 FSVAQVSAAGFFSAIPMTLVTAPFERVKVLLQIQGQKTLAPGEKPkyngGLDVVRKLYKEGGIRSIFRGSFATLARDGPGSASYFAAYEVIKRKL 218
                 57788899***************************99665555555566*******************************************987 PP

  == domain 3  score: 57.7 bits;  conditional E-value: 4.7e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCTT CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllkk 96 
                 + +  +aG+ ag++ ++ ++P+d+vK rlqt  ++ +      + +v++ +y   G ++++ G+ p+++r +pa+a++f+  e  ++ll+k 
  KHJ33840.1 234 LGAITVAGASAGIAMWVPVFPIDTVKSRLQTMDGKPT------VGSVIRGLYAAGGYKAFFPGFAPAITRAIPANAATFLGVELAHHLLNKA 319
                 556679*****************************88......679*******************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 2562.21
//
Query:       KHJ33841.1  [L=436]
Description: putative drap deaminase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.5e-29  101.9   0.0      6e-29  101.2   0.0    1.4  1  PseudoU_synth_2  RNA pseudouridylate synthase
    0.00025   20.7   0.1    0.00052   19.7   0.1    1.6  1  S4               S4 domain
  ------ inclusion threshold ------
      0.069   13.3   0.0       0.15   12.3   0.0    1.5  1  Auto_anti-p27    Sjogren's syndrome/scleroderma autoantigen 1


Domain annotation for each model (and alignments):
>> PseudoU_synth_2  RNA pseudouridylate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.2   0.0     1e-32     6e-29       1     159 [.     116     279 ..     116     280 .. 0.96

  Alignments for each domain:
  == domain 1  score: 101.2 bits;  conditional E-value: 1e-32
  PseudoU_synth_2   1 dlvvvnKPagvpvqpeakdgsekekettatssraeeekkelklvhRLDkatsGllllAksseaanklakafeerkvrKkYlalvfgapeeeega 94 
                      d++v+nKP+g+pv+p +     + ++ ++  + +++++ ++ +++RLD+ tsG++ ++k ++aa+kl+ +++er+vrK+Y+a v+g+ +     
       KHJ33841.1 116 DIIVINKPSGLPVHPAG---RYNYNSVVEIMRAERGHQWNPLPCNRLDRLTSGVMFIGKHAKAAEKLSLQISERTVRKEYIARVNGEFPLGDIV 206
                      589**************...8888888888889999999**********************************************999999999 PP

  PseudoU_synth_2  95 ikkkiskdtekqegarrkaeeldgkkavtylkvlksgs...........seksakvslveleletGrkhQiRvhla 159
                      ++++i +    + +  +++ +  gk+a+t++k l+  s            + ++++s v++ ++tGr+hQiRvhl+
       KHJ33841.1 207 CDQPILQ---ISPKLGLNRVRASGKSARTVFKRLAFYSlsprksdgsdvPSDEKGYSIVRCLPVTGRTHQIRVHLQ 279
                      9999999...999999*********************************999**********************97 PP

>> S4  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.1   8.7e-08   0.00052      16      48 .]      60      92 ..      48      92 .. 0.89

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 8.7e-08
                HHHHHHHHHTTTEEETTEEE--TT-EE-TTCEE CS
          S4 16 rreArqlIehGrVlVNGkvvkdpsyrVkpgDvi 48
                    +++Ie G V VNGk+v   s++++ gD+i
  KHJ33841.1 60 VEYYKDAIERGAVVVNGKRVETTSHIIQNGDII 92
                5566899************************97 PP

>> Auto_anti-p27  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.5e-05      0.15      12      30 ..     349     367 ..     348     371 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.5e-05
  Auto_anti-p27  12 tMLaetCpvCgvPLmrdrk 30 
                    ++ +e+C+vC++PL  d+ 
     KHJ33841.1 349 KLSGEVCEVCSTPLYTDPS 367
                    5789***********9983 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 3470.18
//
Query:       KHJ33842.1  [L=287]
Description: putative folic acid synthesis protein fol1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.8e-16   58.8   0.0    3.5e-13   50.1   0.0    2.5  2  FolB             Dihydroneopterin aldolase
  ------ inclusion threshold ------
      0.045   13.8   0.0       0.15   12.2   0.0    1.9  1  Alpha_E3_glycop  Alphavirus E3 glycoprotein


Domain annotation for each model (and alignments):
>> FolB  Dihydroneopterin aldolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0017        15      23      62 ..      44      86 ..      36      97 .. 0.76
   2 !   50.1   0.0   3.9e-17   3.5e-13       2     108 ..     176     278 ..     175     281 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0017
                EEEEEEEEEEE..-CHHHHHHTTGGGS.S-HHHHHHHHHHHHH CS
        FolB 23 Qrvvvdlelel..dlskaaesddledt.vdYaelakavkelve 62
                Q+ +++ +++l   ++    +d ++dt v+Y++l+k + e ++
  KHJ33842.1 44 QPALISCTVSLkaPFTLTVLEDAVNDTtVHYGTLSKSILEACN 86
                5555555554422778888999998888********9988765 PP

  == domain 2  score: 50.1 bits;  conditional E-value: 3.9e-17
                 EEEEEEEEEEESSSHHHHHC-EEEEEEEEEEE-CHHHHHHTTGGGS.S-HHHHHHHHHHHHHSSEES-HHHHHHHHHHHHH....CHST....ESEEEE CS
        FolB   2 eikglrvpaiiGvnpeErelkQrvvvdleleldlskaaesddledt.vdYaelakavkelvesssfkllEalaeriaeall....eefp....vekvev 91 
                 e+++lr+p++iGvnp+Er+++Q v v++++++          +++    +  l++a+++ v++ss+++lEal +++ + +        +       ++v
  KHJ33842.1 176 ELSDLRIPTLIGVNPNERLARQIVNVTVQIDY----------FTSLpEEFFMLEQAITKSVTESSYQTLEALSKQVGDSVDailrP--NlsnvWPTIRV 262
                 799***************************44..........3333367899**********99************9999533331..1223455578* PP

                 EEEETTSSSTC.ESEEEE CS
        FolB  92 rveKpnapiga.adavgv 108
                 +++Kp+a+  + a+ + +
  KHJ33842.1 263 KLSKPTAV--TlAEFPMI 278
                 *******7..33666655 PP

>> Alpha_E3_glycop  Alphavirus E3 glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.6e-05      0.15       9      51 ..      40      84 ..      28      94 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.6e-05
  Alpha_E3_glycop  9 FPCdqPpcvPcCYekepeetLriLednvdrpg..YydLLqaaLtC 51
                      P +qP  + c    ++  tL +Led v+  +  Y +L + +L  
       KHJ33842.1 40 HPVSQPALISCTVSLKAPFTLTVLEDAVNDTTvhYGTLSKSILEA 84
                     699*************************97644388888888853 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2126.63
//
Query:       KHJ33843.1  [L=464]
Description: putative carbohydrate-binding module family 48 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.5e-24   84.8   0.6    3.5e-24   84.8   0.6    3.2  3  AMPKBI     5'-AMP-activated protein kinase beta subunit, inte
    5.5e-23   81.0   0.0    9.2e-23   80.3   0.0    1.4  1  AMPK1_CBM  Glycogen recognition site of AMP-activated protein


Domain annotation for each model (and alignments):
>> AMPKBI  5'-AMP-activated protein kinase beta subunit, interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   4.1       1.9   1.7e+04       6      33 ..      82     109 ..      78     208 .. 0.64
   2 ?   -1.4   0.2      0.32   2.9e+03       7      42 ..     309     343 ..     281     354 .. 0.68
   3 !   84.8   0.6   3.9e-28   3.5e-24       2      75 .]     391     460 ..     390     460 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 1.9
      AMPKBI   6 pklPphLekvllnkssdsaassaddssv 33 
                 p++P  L++   +++++s+  + dd+  
  KHJ33843.1  82 PTVPDNLKEAQTDSKQESTPVAIDDEPS 109
                 6677777766666644444333333332 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.32
      AMPKBI   7 klPphLekvllnkssdsaassaddssvlpiPnhvvL 42 
                 +lP+  +++   +  +++ s ++d++v  +P+  +L
  KHJ33843.1 309 TLPAPTNSYQETN-IREQLSNSQDQAVSNQPKELNL 343
                 4554444333333.3455566666677777776665 PP

  == domain 3  score: 84.8 bits;  conditional E-value: 3.9e-28
      AMPKBI   2 lkeppklPphLekvllnkssdsaassaddssvlpiPnhvvLnHLltssikngvlavgcttRYrkKyvTtvlYkP 75 
                 l++pp+lP  L k +ln     a+  +dd svl +Pnh vLnHL+tssik +vlav++ttRY+kKyvTt+lYkP
  KHJ33843.1 391 LPTPPSLPGFLGKPILNA----ATPLKDDGSVLIMPNHSVLNHLATSSIKGSVLAVSVTTRYKKKYVTTILYKP 460
                 799***************....8999***********************************************9 PP

>> AMPK1_CBM  Glycogen recognition site of AMP-activated protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.3   0.0     1e-26   9.2e-23       1      83 [.     218     303 ..     218     305 .. 0.96

  Alignments for each domain:
  == domain 1  score: 80.3 bits;  conditional E-value: 1e-26
   AMPK1_CBM   1 vptvikWkggGkkVyvtGsfnnWkkkipLk...ksekdfsvilkLpeGthqykFiVDgewrvdpdlptatdeeGnlnNvievkesd 83 
                 vpt ++W +gG+k+yvtG++ +W+kk  L+     ++ f +i+++++Gth+++Fi D  + ++p+lpt+ d  +nl+N+iev+++d
  KHJ33843.1 218 VPTLFEWAYGGEKIYVTGTIFHWNKKHCLHpvpGCPGLFRAIINVRPGTHHIRFIKDSVMLCSPSLPTTVDFGNNLVNYIEVSADD 303
                 79****************************888889**********************************************9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       528  (0.0294495); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3552.95
//
Query:       KHJ33844.1  [L=159]
Description: hypothetical protein EV44_g0227 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1156.86
//
Query:       KHJ33845.1  [L=1246]
Description: putative protein transporter sec31 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-09   37.9   2.2    1.4e-08   34.8   0.1    3.1  3  Sec16_C   Sec23-binding domain of Sec16
    8.3e-07   29.6   1.4      0.088   13.7   0.1    6.0  6  WD40      WD domain, G-beta repeat
  ------ inclusion threshold ------
        0.7   10.5   5.0       0.26   11.9   0.2    2.8  2  Sec16     Vesicle coat trafficking protein Sec16 mid-region
        3.5    7.4   6.6       0.25   11.1   0.1    2.5  2  SRA1      Steroid receptor RNA activator (SRA1)


Domain annotation for each model (and alignments):
>> Sec16_C  Sec23-binding domain of Sec16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2      0.99   4.4e+03      68     111 ..     414     461 ..     392     472 .. 0.71
   2 !   34.8   0.1   3.1e-12   1.4e-08       1     235 [.     563     781 ..     563     789 .. 0.81
   3 ?   -0.9   0.0      0.22     1e+03     246     292 ..    1196    1242 ..    1187    1245 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.99
                 T-HHHHHHHHHH...............-HHHHHHHHHSHHHHHHHHHH CS
     Sec16_C  68 Gnseeavdelvptsaraslq....qaeeskeaeealdkWretvalvls 111
                  + e+a++++ +t+++ +++    ++  ++++ee  ++Wr + +l++ 
  KHJ33845.1 414 SEIESAIQNFEKTQKSGNFNeicqNHILRANSEEEKADWRIMETLIAK 461
                 456788899999888888888887666778888888888887777765 PP

  == domain 2  score: 34.8 bits;  conditional E-value: 3.1e-12
                 HHHHHHTT-HHHHHHHHHHTT-HHHHHHHHHTS-HHHHHHHHHHHHH---.---THHHHHHHHHHTTT-HHHHHHHHHH...........-HHHHHHHH CS
     Sec16_C   1 iqalLlrGdrekAlqlAldkklWahAlliasllgkelwkevvqefvrselkegensesLrvlyqvfaGnseeavdelvptsaraslqqaeeskeaeeal 99 
                 i + L+ G+ ekA++++l++ l a Al+ia++ gk+l ++  +++++++ +     + Lr+l  ++  n     d  ++                   l
  KHJ33845.1 563 ITQALILGKFEKAMNICLEQNLIADALIIANCGGKSLLENAQSTYLSKKTE---GPNYLRLLSAIIGKNLW---DVVYN-----------------ADL 638
                 67899*********************************************6...4599**99988877766...33444.................679 PP

                 HSHHHHHHHHHHTS--HH.HHHHHHHHHHHHHTT-HHHHHHHHHHT.......-SSS...............BSSTTS--B--SSS.TTSHHHH.HHHH CS
     Sec16_C 100 dkWretvalvlsnrspsd.seaLtalGdlLaskgrveaahicylla.......lsqtslfgglds.psarl.vllgadhvkfessf.akdlesi.lltE 186
                 ++W+et+ +++    +++ s    alGd +++++    a++cyl+             ++++l++ ++a++  l+g++  + +    ++ +e++ ++  
  KHJ33845.1 639 ENWKETMVTLCTYADSGEfSDLCEALGDRILEHDSPRDASFCYLVGsklekvvP---IWLKQLEEvEKAEVeKLIGDSMFSVHARNlQNFIEKVtVFRN 734
                 **************9999999999**********************66433210...233343331455566889998888777665666655427899 PP

                 HHHHHH.HT....TT----CCCHHHHHHHHHHHHHTT-HHHHHHHHHHH CS
     Sec16_C 187 iyEfalslspaakekfaglphLlayKllhAavLaelGlvseAqkYcdai 235
                 +  +   l+++++ +   l  L a  + +A + + +G+++ A++Y d +
  KHJ33845.1 735 VTGYKD-LEQNVS-SGWKLSPLYAKYIEYANIATTHGQLEIAERYLDLL 781
                 999988.665555.44788999999999*****************9976 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.22
                  SHHHHH.HHHHHHHHHHHT-XXX.....XXX...XXXXXXXXXXXXXX CS
     Sec16_C  246 spylhptlleqlkdLserLseapkedksssWl.kiskpsldkvwgsle 292 
                  ++ +++  +++l+dL e L   + +  ++     i+k ++d+ ++++ 
  KHJ33845.1 1196 EELIKADTIQRLNDLAEALVMKNYDL-ATRLQiDIQKEKMDECGNWMV 1242
                  56677778999********9999863.3444459********999985 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.17   7.4e+02      15      38 .]      73     101 ..      59     101 .. 0.66
   2 ?    2.6   0.0     0.064   2.9e+02      10      38 .]     120     150 ..     112     150 .. 0.79
   3 ?    2.4   0.1     0.075   3.3e+02      13      38 .]     170     196 ..     159     196 .. 0.78
   4 ?    1.4   0.0      0.15   6.7e+02      11      38 .]     211     242 ..     201     242 .. 0.74
   5 !   13.7   0.1     2e-05     0.088       5      38 .]     251     286 ..     247     286 .. 0.85
   6 ?   -1.1   0.0      0.94   4.2e+03      18      36 ..     308     327 ..     300     327 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.17
                 EEEEETTSSE....EEEEE.TTSEEEEEE CS
        WD40  15 slafspdgaw....lasGs.dDgtvriWd 38 
                 ++a+sp +      +++G  ++g++++Wd
  KHJ33845.1  73 DIAWSPPNEGhprgIIAGAlENGSLYLWD 101
                 555444444466665678658*******9 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.064
                 S.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40  10 H.ssvtslafspdgawl.asGsdDgtvriWd 38 
                 H +++ sl+f+p ++ + a+++ +g + i+d
  KHJ33845.1 120 HtGPIKSLQFNPLKPQIlATAGTKGELFIYD 150
                 7677*****9999999625666699999998 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.075
                 EEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40  13 vtslafspdgaw.lasGsdDgtvriWd 38 
                   ++a+++  +  la+G+  g + +Wd
  KHJ33845.1 170 LECVAWNRKVPHiLATGGTGGFITVWD 196
                 6799666666665689999*******9 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.15
                 SSEEEEEEETTSSE.EEEE...ETTSEEEEEE CS
        WD40  11 ssvtslafspdgaw.lasG...sdDgtvriWd 38 
                 + v ++a++p+++  l+++   + ++ + +Wd
  KHJ33845.1 211 KAVGAIAWDPENSTkLLTAtpdDTKPVILLWD 242
                 558899*******9866773532499999998 PP

  == domain 5  score: 13.7 bits;  conditional E-value: 2e-05
                 EEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 
                  tl GH +++ s++  ++d+++l+s+++D+   +W+
  KHJ33845.1 251 CTLQGHnQGILSISwCQQDSNLLLSCGKDNRTILWN 286
                 5899**777999997778888899*******99998 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 0.94
                 EETTSSEE.EEEETTSEEEE CS
        WD40  18 fspdgawl.asGsdDgtvri 36 
                 f+p+++ l a++s Dg++ i
  KHJ33845.1 308 FHPHNPALsATASFDGKISI 327
                 78888887347788**9976 PP

>> Sec16  Vesicle coat trafficking protein Sec16 mid-region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2   5.8e-05      0.26       4      87 ..     379     484 ..     378     516 .. 0.52
   2 ?   -2.1   0.8       1.3   5.7e+03      29      64 ..    1036    1071 ..    1019    1108 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 5.8e-05
       Sec16   4 vsFGfGGklvtmfPkrkpsls.gssvsssksspgevkirslkelvpssedaskfPGPl.....................vkgkskkkevlkwLseriee 80 
                 vsFGfGGkl++    ++++ +  ss  ++++++ e +i+s  + +++++++ +f+                          +k+ +k+v+ +L++ + +
  KHJ33845.1 379 VSFGFGGKLISFSLTSNNTSKhRSSKIQISQYSLESEIESAIQNFEKTQKSGNFNEICqnhilranseeekadwrimetLIAKEPRKRVVDYLESSAIK 477
                 79********99654444444333333333333333333333332222222222221133333333333333334343334677777777777777666 PP

       Sec16  81 leaevay 87 
                 + a +++
  KHJ33845.1 478 STAIDET 484
                 6665555 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.3
       Sec16   29 sssksspgevkirslkelvpssedask.fPGPlvkgk 64  
                  +++   p++ ++++ +++ p+ + +++ fP P  +++
  KHJ33845.1 1036 KNMYGPPTPQSVSNSNQYTPQIAPVASqFPPPA-NHN 1071
                  555555666666666666666655555577777.332 PP

>> SRA1  Steroid receptor RNA activator (SRA1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.8   3.3         4   1.8e+04       7      20 ..     925     937 ..     921     952 .. 0.51
   2 ?   11.1   0.1   5.5e-05      0.25       8     125 ..    1124    1244 ..    1115    1245 .. 0.68

  Alignments for each domain:
  == domain 1  score: -5.8 bits;  conditional E-value: 4
        SRA1   7 svaapppPsveavk 20 
                 ++ +pppP+  +++
  KHJ33845.1 925 ATPPPPPPK-GPAP 937
                 333333443.3333 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 5.5e-05
        SRA1    8 vaapp...pPsveavklsskee...kslsesesepeledvlsvLnqaLeaCrksvkkqvcddvekrLrlledsWksGkL.slpvrkrmevLsqelqs 97  
                  +aapp    P+   ++++ k +   +s   +++  ++e   + +++  ++  +s   qv +d +krL++l d+ ++  L  +   +r++ L++ l  
  KHJ33845.1 1124 IAAPPkatVPE---TTTKVKYPagdRSHIPQNARKMVEIFSQDMQRVASQAPSSFLPQV-KDTQKRLNILFDHLNNEELiKADTIQRLNDLAEALVM 1216
                  34444233222...222222222223333333444445455556666666666677776.5789********99999882567889*********** PP

        SRA1   98 krWdaaDdihrsLmvDhvtevsqWmvGv 125 
                  k++d a  +   +  + + e   Wmv +
  KHJ33845.1 1217 KNYDLATRLQIDIQKEKMDECGNWMVSI 1244
                  **************************76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       866  (0.0483016); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.81u 0.30s 00:00:01.11 Elapsed: 00:00:00.46
# Mc/sec: 8144.05
//
Query:       KHJ33846.1  [L=403]
Description: putative dna repair protein rad10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-47  160.5   0.2    2.1e-47  159.8   0.2    1.3  1  Rad10     Binding domain of DNA repair protein Ercc1 (rad10/S
    0.00068   20.2   2.4     0.0023   18.5   0.1    2.6  3  HHH_5     Helix-hairpin-helix domain


Domain annotation for each model (and alignments):
>> Rad10  Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.8   0.2   2.4e-51   2.1e-47       1     114 []      81     194 ..      81     194 .. 0.99

  Alignments for each domain:
  == domain 1  score: 159.8 bits;  conditional E-value: 2.4e-51
       Rad10   1 tilvserqkgnplLkslknvpweykdivpDyvigsttcvlflslkyhklhpeYieerlkklkkkyklrvlLvlvDvedseevlkeLnkicilndltlll 99 
                 +ilvs+rqkgnp+L++l++  wey+di +Dy++g ttc+lflslkyh+lhpeY+++r+k l  ky+lrvlL+lvD++++e+v+keL+k+c++n++t +l
  KHJ33846.1  81 SILVSPRQKGNPVLTNLRSFVWEYSDIPADYILGATTCALFLSLKYHRLHPEYVYNRIKGLYGKYNLRVLLTLVDIQNHEDVIKELTKTCLVNNVTFIL 179
                 59************************************************************************************************* PP

       Rad10 100 awsaeeaaryletlk 114
                 +wsa eaaryle++k
  KHJ33846.1 180 CWSAAEAARYLELYK 194
                 ************998 PP

>> HHH_5  Helix-hairpin-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.8   1.6e+04      24      35 ..      13      24 ..      11      28 .. 0.75
   2 ?    0.8   0.1     0.086   7.7e+02      39      53 ..     204     219 ..     197     222 .. 0.76
   3 !   18.5   0.1   2.6e-07    0.0023       8      52 ..     225     268 ..     218     271 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.8
                -SHHHHHHS-HH CS
       HHH_5 24 esvedlaaadve 35
                +++e+laa d+ 
  KHJ33846.1 13 DFLEALAATDPT 24
                578999999986 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.086
                 TSTTS-HHH.HHHHHH CS
       HHH_5  39 kipGiGkkt.Aeriil 53 
                  i+Gi kkt Ae++i+
  KHJ33846.1 204 GIKGIEKKTyAEKMIE 219
                 5899999965788776 PP

  == domain 3  score: 18.5 bits;  conditional E-value: 2.6e-07
                 TT--HHHHHHHHTTT--SHHHHHHS-HHHHHTSTTS-HHHHHHHH CS
       HHH_5   8 sGiGpktAlallsaGiesvedlaaadveeLakipGiGkktAerii 52 
                  Gi++ +A++l+sa ++s+   ++a +ee+a i G G+k+++r++
  KHJ33846.1 225 RGINKTDAVSLVSA-FGSIKGAINARPEEIAIIGGWGEKKVKRWC 268
                 59************.****************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       798  (0.0445089); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.39
# Mc/sec: 3127.95
//
Query:       KHJ33847.1  [L=313]
Description: putative ras family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-38  132.2   0.3    1.3e-22   80.2   0.0    2.2  2  Ras       Ras family
      5e-11   42.9   0.1    1.4e-10   41.4   0.0    1.8  2  Roc       Ras of Complex, Roc, domain of DAPkinase
    2.2e-05   24.0   0.0    3.4e-05   23.4   0.0    1.3  1  Arf       ADP-ribosylation factor family
      9e-05   22.5   0.0    0.00019   21.5   0.0    1.7  1  MMR_HSR1  50S ribosome-binding GTPase
    0.00022   20.8   0.5     0.0026   17.3   0.1    2.6  2  GTP_EFTU  Elongation factor Tu GTP binding domain


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.2   0.0   3.5e-26   1.3e-22       3     102 ..       9     107 ..       7     129 .. 0.93
   2 !   50.3   0.1   5.5e-17     2e-13     103     161 ..     152     210 ..     127     211 .. 0.87

  Alignments for each domain:
  == domain 1  score: 80.2 bits;  conditional E-value: 3.5e-26
                 EEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHHHS CS
         Ras   3 vlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikrva 101
                  + Gd+a+GK+s+ lr v++ +++ y++Ti +d y+ + ++d k ++++i DTAGqe+++sl +++   ++++llvydit+ es++ +k++ + i ++ 
  KHJ33847.1   9 TICGDGATGKSSIALRLVRSAWTSIYDPTI-EDTYSVTRQIDRKPYHISIIDTAGQEKYRSLWKKSNYCSDAFLLVYDITRPESLSVLKEFSKLIDQKY 106
                 689***************************.**********************************************************9999998887 PP

                 T CS
         Ras 102 e 102
                 +
  KHJ33847.1 107 D 107
                 7 PP

  == domain 2  score: 50.3 bits;  conditional E-value: 5.5e-17
                 TTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHHH CS
         Ras 103 envpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 ++   vL+Gn +Dl++kr vs ++g ++a+++g+ fletSAk+  n+ee+fe+ ++++l
  KHJ33847.1 152 QKPIKVLIGNMCDLQQKRRVSIKTGIKWARKHGCSFLETSAKDMINIEEVFEMTIQQVL 210
                 456789************************************************99986 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.0     4e-14   1.4e-10       2      95 ..       8      92 ..       7     117 .. 0.79
   2 ?   -3.4   0.0         3   1.1e+04     107     119 ..     152     164 ..     144     165 .. 0.61

  Alignments for each domain:
  == domain 1  score: 41.4 bits;  conditional E-value: 4e-14
                EEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEEGHHHHCH CS
         Roc  2 vvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvydsrssenl 95
                + ++Gd+++GK+s++ r+v++  ++ +++ti  +++ ++  +i+        k ++++i DtaGqe++rsl +     +++++lvyd ++ e+l
  KHJ33847.1  8 ITICGDGATGKSSIALRLVRSAWTSIYDPTIEDTYSVTR--QID-------RKPYHISIIDTAGQEKYRSLWKKSNYCSDAFLLVYDITRPESL 92
                689*****************************9987654..232.......35789**************9998888899999***96554333 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 3
                 SSS-EEEEEE-TT CS
         Roc 107 gkspvilvgnkiD 119
                 +k + +l+gn +D
  KHJ33847.1 152 QKPIKVLIGNMCD 164
                 3334588999888 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   9.5e-09   3.4e-05      16     111 ..       7     105 ..       2     164 .. 0.82

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 9.5e-09
                 EEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEE...EEEEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHCTS CS
         Arf  16 rilllGLDnaGKtTilkklkleelvt.tvPTigfn...veeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkallee 110
                  i + G  ++GK+ i  +l     ++   PTi  +   ++++  k +++++ D  Gqek R+lWk+   + da + v D +  e l+   +e+++l+++
  KHJ33847.1   7 SITICGDGATGKSSIALRLVRSAWTSiYDPTIEDTysvTRQIDRKPYHISIIDTAGQEKYRSLWKKSNYCSDAFLLVYDITRPESLSVL-KEFSKLIDQ 104
                 5777888889*********9999888467**9866222578999**********************999***********999999865.577888776 PP

                 G CS
         Arf 111 e 111
                 +
  KHJ33847.1 105 K 105
                 5 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   5.3e-08   0.00019       2      96 ..       8      97 ..       7     164 .. 0.73

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 5.3e-08
                EEEEESTTSSHHHHHHHHHTS......TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHC.TSEEEEEEETT........T CS
    MMR_HSR1  2 vaivGrpNvGKStLinaltge......kaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflalee.adlillvvdas........e 87
                + i G   +GKS++  +l+++         ++d+  +Tr+i ++ +     +i ++Dt+G  e      + +  +++ +  +d++llv d++        +
  KHJ33847.1  8 ITICGDGATGKSSIALRLVRSawtsiyDPTIEDTYSVTRQIDRKPY-----HISIIDTAG-QE------KYRSLWKKSNYcSDAFLLVYDITrpeslsvlK 96
                67899999***********976622333466666666666666655.....59*******.54......4444455444436999***9998654444331 PP

                TCSHHHHHH CS
    MMR_HSR1 88 eklkpldee 96
                        e
  KHJ33847.1 97 --------E 97
                ........2 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.13   4.7e+02       4      26 ..       6      28 ..       3      45 .. 0.85
   2 !   17.3   0.1   7.3e-07    0.0026      65     189 ..      47     206 ..      28     211 .. 0.57

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.13
                EEEEEEESTTSSHHHHHHHHHHH CS
    GTP_EFTU  4 rnigiighvDhGKtTLtdrLlyk 26
                + i+i+g+  +GK+++  rL+ +
  KHJ33847.1  6 VSITICGDGATGKSSIALRLVRS 28
                7899***********99999865 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 7.3e-07
                 T.TCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTBSTHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHHHH......... CS
    GTP_EFTU  65 k.etkkylinliDtPGHvdFskevirglrvlDgavlvvdaveGvepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqklsrk......... 153
                 + + k y+i++iDt G +++ +   ++    D  +lv d+++       + +  +++++  i   + K   lk+ ++   ++ + +++++         
  KHJ33847.1  47 QiDRKPYHISIIDTAGQEKYRSLWKKSNYCSDAFLLVYDITRPESLSVLKEFSKLIDQKYDIKHKVLKHNVLKHPIDTRGKNNSFEFKSRhrsimsgsn 145
                 346999*********************************997655444444444444444444444444444444444444444444333333333333 PP

                 ....................HHHHHHHHHTTT...............TTEEEEEEBTTTTBTHHHHHHHHH CS
    GTP_EFTU 154 ....................eeklekygekge...............kevpvvfgSalkgegvktllealv 189
                                     +          +               + ++++ +Sa++  ++++++e+ +
  KHJ33847.1 146 eqykthqkpikvlignmcdlQ----------QkrrvsiktgikwarkHGCSFLETSAKDMINIEEVFEMTI 206
                 333333344444433333330..........0333333333444444556666666666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       790  (0.0440627); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2381.46
//
Query:       KHJ33848.1  [L=254]
Description: putative 60s ribosomal protein l2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-41  142.1   4.8    1.7e-41  141.3   4.8    1.4  1  Ribosomal_L2_C  Ribosomal Proteins L2, C-terminal domain
    1.8e-15   56.7   0.0    4.6e-15   55.3   0.0    1.7  1  Ribosomal_L2    Ribosomal Proteins L2, RNA binding domain


Domain annotation for each model (and alignments):
>> Ribosomal_L2_C  Ribosomal Proteins L2, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.3   4.8   1.9e-45   1.7e-41       2     115 ..      98     224 ..      97     234 .. 0.92

  Alignments for each domain:
  == domain 1  score: 141.3 bits;  conditional E-value: 1.9e-45
                     SSS-EBSSSS-TTB-BBSE-SSTTS--SSS-SSSB-EEBB-B...SSEEEEEETTS-EEEEETTSBEBES-BS-TTCTT----STTHHHHT.... CS
  Ribosomal_L2_C   2 vGnvlplknipeGtivhnielkpgkggklarsaGtyaqvvak..egkkvtvklpSgevrkvssecrAtiGvvsngehkekklgkAgrkrwl.... 90 
                     +Gnvlplk++peGt++ n+e+k+g++g l r++G+y++v+++  ++ k++vklpSg +++++s++r ++G+v++g++++k+l+kA+r+ ++    
      KHJ33848.1  98 IGNVLPLKSVPEGTVLTNVEEKVGDRGALGRTSGNYVTVIGHnpDEGKTRVKLPSGAKKVIKSNARGMVGIVAGGGRTDKPLLKASRAKHKfavk 192
                     7*****************************************6559************************************************* PP

                     .TBS----SSSS-TTTSSS--SS....SS..- CS
  Ribosomal_L2_C  91 .grrpkvrGvamnpvdHphGGGe....Gk..t 115
                      + +pk+rGvamnpvdHphGGG+    Gk  t
      KHJ33848.1 193 rNSWPKTRGVAMNPVDHPHGGGNhqhiGKasT 224
                     ***********************666665323 PP

>> Ribosomal_L2  Ribosomal Proteins L2, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.3   0.0   5.2e-19   4.6e-15       1      76 [.      11      89 ..      11      90 .. 0.91

  Alignments for each domain:
  == domain 1  score: 55.3 bits;  conditional E-value: 5.2e-19
                  TB-TT--BSSTT--------EE-B--S---SS--EEEEEEE--TT-SS-EEEEEETTTEEE.....EEE--SS--SS-EE- CS
  Ribosomal_L2  1 GrnnsgritvrhrggGhkkkyrlidfkrnkekvkgkVveieyDpgRsApiAlvkyedgekr.....yiiapeglkvGdtvv 76
                  Gr++ + +++r  +    +++r +d+++ +++++g+V++i++DpgR Ap+A+v++ d  ++      +ia eg+ +G++++
    KHJ33848.1 11 GRGSIFTAHTRLNKA--PAQFRTLDYAEAHGYLRGVVKDIIHDPGRGAPLARVQFRDPYRFklhteTFIANEGMYTGQFIY 89
                  99999**********..****************************************444445555899***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       280  (0.0156172); expected 358.6 (0.02)
Passed bias filter:                      254  (0.014167); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1923.87
//
Query:       KHJ33849.1  [L=348]
Description: putative adenosine kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.8e-65  219.6   0.0    6.5e-65  219.4   0.0    1.0  1  PfkB          pfkB family carbohydrate kinase
    0.00034   20.1   0.0     0.0006   19.3   0.0    1.3  1  Phos_pyr_kin  Phosphomethylpyrimidine kinase


Domain annotation for each model (and alignments):
>> PfkB  pfkB family carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.4   0.0   7.3e-69   6.5e-65       5     301 ..      29     341 ..      25     342 .. 0.97

  Alignments for each domain:
  == domain 1  score: 219.4 bits;  conditional E-value: 7.3e-69
                 EEEEEEEEEEEEECSSH....TTSEEEESEEEEEEESHHHHHHHHHHHTT..-EEEEEEEEESSHHHHHHHHHHHHTTEEETTEEEESSSEEEEEEEEE CS
        PfkB   5 vviGealidliavsekl....egelvevktveksaGGagaNvAvalarlg..advafigavGdDnfGeflleelkkegvdtdyvkidedtrtglalivv 97 
                  ++G++ +d+i+++ +l    +++l ++   +  aGG ++N+A+++++l    +v+fig +GdD++++ l+e  kk+g++++y + d++++tg + +++
  KHJ33849.1  29 QKYGIKPNDAILAETDLhksiYDDLLNNFPAKLIAGGGAQNTARGAQYLLppDSVVFIGGIGDDKYADILKEAVKKAGLRVEYRV-DAKEPTGRCGVII 126
                 689***********9999***************************************************************7776.************* PP

                 TTTSEEEEEEEEGGGGGHHHHHHH..HHHHHHGCTSEEEEESEECTTSHHHHHHHHHHHHHHTTEEEEEECESSSHH.HHHHHHHHHCTESEEEEEHHH CS
        PfkB  98 dedgertivfnrgaaadltkeele..ededlleeadllyisgllsselpeavleelaeaaknggtfdpnlldplgaq.fkeallellaladllkpneeE 193
                 +++ +r++++++gaa+++  ++l+  e+++l+e+a+++ i+g + +++p a+ ++++eaa +++tf+  l++p++++ fke l++  ++ d++++ne+E
  KHJ33849.1 127 TGH-NRSMITDLGAANHYNLQHLKspEVWKLIENAEFYFIGGYHLTVCPPAIQALAEEAAAKNKTFIFSLSAPFIPKfFKEPLDDTAPYWDYVIGNETE 224
                 *97.9********************************************************************************************** PP

                 HHHHHTSCT......HSHHHHHHHHHHHHHTTSSEEEEEEGGGEEEEEE...TTEEEEEEE.SSSS-SBGTTHHHHHHHHHHHHHHTTHHHHHHHHHHH CS
        PfkB 194 lealtgekl......edieealaalhklkakgaktvvvtlGkeGalvve...kdgelkvpavpkvkvvDttGAGDsfvggflaallegksleealrfan 283
                 + a +++++      ++i++alaal+k +++ ++t ++t+G e+++vv    + +e++v+a+ k  + DttGAGD+f++gf+a+l++g sl +a+  ++
  KHJ33849.1 225 ALAYAESHNieskdiKEIAKALAALPKKNNEKKRTAIITQGTEPTIVVIdgqEPQEFPVHAIDKDLINDTTGAGDAFAAGFIAGLVSGFSLPQAIDQGQ 323
                 ******9999**99*************999999****************9888899******************************************* PP

                 HHHHHHHTSSSSSTCSCC CS
        PfkB 284 avAalvvqkkgaiaslpt 301
                 ++A l++q+ g++++ p+
  KHJ33849.1 324 WLAKLSIQELGPSYPYPK 341
                 *************99886 PP

>> Phos_pyr_kin  Phosphomethylpyrimidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   6.7e-08    0.0006     118     227 ..     213     325 ..     199     338 .. 0.73

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 6.7e-08
                   GG-SEEE-BHHHHHHHHT---SSHHHHHHHHHHHHHTT-SEEEEEEGGS-SSSEEEEEEEETSSEEEEEEEE----...S--BTHHHHHHHHHHHHH CS
  Phos_pyr_kin 118 platvitPNlpEaeaLlgekikteedmkeaakkllklgakaVlikGghlegeeavvtdvlydgeeveeleaeriet...knthGtGCtlssaiaael 211
                   p  + ++ N  Ea a ++++  + +d+ke ak+l++l +k+   k   + ++ ++ t v++dg+e +e++ + i++   ++t G+G+++++   a l
    KHJ33849.1 213 PYWDYVIGNETEALAYAESHNIESKDIKEIAKALAALPKKNNEKKRTAIITQGTEPTIVVIDGQEPQEFPVHAIDKdliNDTTGAGDAFAAGFIAGL 309
                   6666778888888888886666778899999999887554444444433333333345777888888888888876333599*************** PP

                   HCTSSHHHHHHHHHHH CS
  Phos_pyr_kin 212 akgesleeAvkkAkey 227
                     g sl++A+++++  
    KHJ33849.1 310 VSGFSLPQAIDQGQWL 325
                   ***********99754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2477.70
//
Query:       KHJ33850.1  [L=675]
Description: putative tpr-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-42  146.1   2.6    2.3e-42  145.4   2.6    1.3  1  EST1_DNA_bind  Est1 DNA/RNA binding domain
    9.5e-19   68.4   1.3    2.2e-18   67.2   0.6    2.0  2  EST1           Telomerase activating protein Est1


Domain annotation for each model (and alignments):
>> EST1_DNA_bind  Est1 DNA/RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.4   2.6   2.6e-46   2.3e-42       1     280 [.     186     464 ..     186     466 .. 0.89

  Alignments for each domain:
  == domain 1  score: 145.4 bits;  conditional E-value: 2.6e-46
                    HHHHHHHHHHH-TTBHHHHHHHHHHHHHTT-HHHHHHHHHHHHHBSB--TTHHHHHHHHHT-TT-HHHHHHHHHHHHHTT---HHHHHHHHHHTTH CS
  EST1_DNA_bind   1 AlrYYllAaellPsnGepyNQlgviaiysedkldavYyylRSllssnpfptAkeNLellfekirkklekgenkqskeskqektpeellkrliilFl 96 
                    A+ YY+lA e+ Ps+G+++N ++v+a+++e++l+avY+++R++++++p   A  NLe++f+ki+++ + ++n           p+ +l+rl   F+
     KHJ33850.1 186 AMGYYQLANEIDPSSGMAHNKMAVLALADENHLNAVYHLFRAIAAQKPDLLAPGNLEIEFKKILGARFTTKND----------PVAKLMRL---FI 268
                    899**************************************************************88887544..........45667777...** PP

                    HHHHHHHSTTTT....TSSTTGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH....HHH-S--SXXXXXXXXX..XXXXHHHHHHHHHHHH CS
  EST1_DNA_bind  97 rlhgklftgtsf..kdelerevlkklqillseslkernlkdaslllkmllinifaie....nlkdkssgeeskektll..llrlalrfifelfgll 184
                     lh+++  gt+   + el++evl+kl ++l es  +       +l k+++i i+a +     lkdk+ ++  +++ ++   ++++ r+ f+l++ l
     KHJ33850.1 269 LLHANFNEGTDSpsNVELQNEVLSKLCLCLEESYGN-------ILEKLVVISIAAQYyssqRLKDKGLEKNLEAQRIFnlHINFNNRMMFQLLSIL 357
                    ************755*****************9975.......66777777777766565577777777777776666777777888888888888 PP

                    HHHTGGGTTT...............-SS-THHHHHHHHHHHHHTT-HHHHHHHHT-HHHHHHHHHHHHHHHH-.---------------SS--HHH CS
  EST1_DNA_bind 185 lekvetlealk..........rdketpsatrvLpalrvylswlksnkslledvekdeklvsslsdllnellss.ellnksfdvekdpkrdylleED 269
                    l +++  ++ +          +dk + +atrv palr+y+ wl+s+k++l+++  ++++  + ++l+  ++s  ++l ++f+v++  +  yll+ED
     KHJ33850.1 358 LPELDDPSEFSkdnnknfvatQDKISVVATRVIPALRHYTLWLASSKESLNPNFGSSQVKLQSKQLWITYASVlTRLVNYFPVKNMVTVPYLLDED 453
                    88887655444699999******************************************************************************* PP

                    HHTTTBGGGTT CS
  EST1_DNA_bind 270 ielkgFsplke 280
                      + gF+p+++
     KHJ33850.1 454 DTTVGFAPFRN 464
                    ********976 PP

>> EST1  Telomerase activating protein Est1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.2   0.6   2.5e-22   2.2e-18       2     135 ..      60     176 ..      59     177 .. 0.80
   2 ?   -2.5   0.0      0.84   7.5e+03      11      40 ..     386     422 ..     383     439 .. 0.61

  Alignments for each domain:
  == domain 1  score: 67.2 bits;  conditional E-value: 2.5e-22
                 HHHHHHHHTHHHHHHHHHHHHHHHH-------H.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-B-...HTT............-.....-----.. CS
        EST1   2 veellWrkvyyevikllkkqlknldsapkkkkkpvekrklklklvkflksaigfYqsliqrllsefel...elssvlkvilksktklpekessekse.. 95 
                 ve+ lW  ++  +++ ++k l++ ++   ++k  vekrk+++++  f+k+++ fY+ +iqrl+s+f+         l+v              +     
  KHJ33850.1  60 VEKRLWH-AHTFINNRYRKILGRYKN---ESKLVVEKRKIEKHYIDFIKTSQFFYKGYIQRLASHFSGikgL----LRVA------------GR-LCln 137
                 7999***.*****************6...46999*******************************9944331....2221............11.2221 PP

                 ----TTB--TTSHHH.HHHHHHHHHHHHHHHHHHHHHHHH CS
        EST1  96 teseeeksslssseqksavlklvhrcLiyLGDlaRYreqf 135
                 + s + ++s s++ q + +  ++h +L+ LGDl+RYr+++
  KHJ33850.1 138 ETSADLSNSVSPEVQ-KLIENSCHATLLQLGDLSRYRNML 176
                 223444555555566.*********************996 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.84
                 HHHHHHHHHHHHHHHH----.......---H.HHHHH CS
        EST1  11 yyevikllkkqlknldsapk.......kkkkpvekrk 40 
                   +vi++l+++   l s+++       +++ + ++++
  KHJ33850.1 386 ATRVIPALRHYTLWLASSKEslnpnfgSSQVKLQSKQ 422
                 5678999999998888666666555553333344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (675 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4760.32
//
Query:       KHJ33851.1  [L=204]
Description: putative effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.36
# Mc/sec: 1678.95
//
Query:       KHJ33852.1  [L=362]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       598  (0.0333538); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.36
# Mc/sec: 3030.57
//
Query:       KHJ33853.1  [L=197]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        1.8    7.1   6.6       0.21   10.2   2.3    1.5  2  Ndc1_Nup  Nucleoporin protein Ndc1-Nup


Domain annotation for each model (and alignments):
>> Ndc1_Nup  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1     0.046   8.3e+02     361     394 ..      23      53 ..       9      88 .. 0.49
   2 ?   10.2   2.3   1.2e-05      0.21     322     412 ..      93     184 ..      81     197 .] 0.60

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.046
    Ndc1_Nup 361 aps..kapknkasapvkelprlsksplkkkddeifg 394
                 a++  +++++++++ v+e+ ++s + +++    i++
  KHJ33853.1  23 AQPplPPLTTSSNTVVNEEEKSS-HVPRN----ILN 53 
                 22233344445555555555554.33333....433 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 1.2e-05
    Ndc1_Nup 322 sdidrkggstWsqilkeClklikeltqrinergqpapkaaps..........kapknkasapvkelprlsksplkkk.ddeifgnsltaeaspksssss 409
                 + ++ ++  +W++ l++C ++i +++++++ +++ + k+ ++             + ++s ++++ p++++ + k + +++ ++       +++ ++++
  KHJ33853.1  93 QRRQDQE-RAWHARLSICASVICNVESTLEMYKRDVEKQEAEfmrnyirkaiA--RLASSDNSPKPPQIPM-NTKPRqTKDFCQ------EKNSEKNNP 181
                 5555555.7*************************6666666678999998662..3333333444444432.222221233333......222223333 PP

    Ndc1_Nup 410 keg 412
                 ++g
  KHJ33853.1 182 PTG 184
                 333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1007  (0.056166); expected 358.6 (0.02)
Passed bias filter:                      578  (0.0322383); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.36
# Mc/sec: 1644.03
//
Query:       KHJ33854.1  [L=552]
Description: hypothetical protein EV44_g2069 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0089   16.2   0.1       0.02   15.1   0.1    1.6  1  PPR_2     PPR repeat family


Domain annotation for each model (and alignments):
>> PPR_2  PPR repeat family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   1.1e-06      0.02       2      45 ..     449     493 ..     448     495 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.1e-06
       PPR_2   2 dvvtyNtlIsgl.ckkgkveeAfklfneMkkrglePnsyTysili 45 
                 ++  yN l+  + +++++++  ++l++eM+  +le+n  T  i++
  KHJ33854.1 449 NIQFYNELLLIYrFRQNDFNGMLRLLEEMEMSSLEMNHETLDIVV 493
                 6678********99**************************98886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (552 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       744  (0.041497); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.37
# Mc/sec: 4522.45
//
Query:       KHJ33855.1  [L=119]
Description: putative nadh-ubiquinone oxidoreductase subunit grim-19 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.3e-21   74.5   0.0    9.8e-21   74.1   0.0    1.3  1  GRIM-19        GRIM-19 protein
  ------ inclusion threshold ------
      0.082   12.7   0.0      0.096   12.5   0.0    1.1  1  Flag1_repress  Repressor of phase-1 flagellin


Domain annotation for each model (and alignments):
>> GRIM-19  GRIM-19 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.1   0.0   1.1e-24   9.8e-21       3      94 ..       2      93 ..       1     113 [. 0.96

  Alignments for each domain:
  == domain 1  score: 74.1 bits;  conditional E-value: 1.1e-24
                XXXXXXSTTXSXXXXSXXXXXXXSXSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS CS
     GRIM-19  3 kQdmpPkGGYapinykrklpktllsglsllalviavtavglyavlksnkerrrekiekrsarlailPlllAerdrrylkqlrknrdeeaklm 94
                 Qd+pP GGY pi+ykr+lp +++++  ll+++++++++g+++v ++ +e+++   ek  +r+ ++P+l+Ae+dr ++++  + +  e+kl+
  KHJ33855.1  2 PQDLPPIGGYDPIQYKRNLPARGFRPAVLLFGMASIMTYGFWRVGQGIREHNELAREKMWSRIHLIPMLTAEEDRDLVRRHLADLAREKKLL 93
                5***************************************************************************************9997 PP

>> Flag1_repress  Repressor of phase-1 flagellin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.1e-05     0.096      13      70 ..      50     107 ..      38     113 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.1e-05
  Flag1_repress  13 rdysnlekalqflrkslipvrlvsedarvitgyvaklnskenkvdlsdkpfdkekrie 70 
                    r++  l++  ++ r  lip+  + ed  ++  ++a+l  ++ ++  s  p++ e+ ++
     KHJ33855.1  50 REHNELAREKMWSRIHLIPMLTAEEDRDLVRRHLADLAREKKLLGSSTSPYNSERYVR 107
                    88899**********************************************9998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       332  (0.0185175); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.33u 0.23s 00:00:00.56 Elapsed: 00:00:00.35
# Mc/sec: 1022.26
//
Query:       KHJ33856.1  [L=848]
Description: putative fcp1-like phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-28   99.4   0.1    6.8e-28   97.4   0.0    2.1  2  NIF        NLI interacting factor-like phosphatase
    5.5e-08   33.1   0.1    1.6e-07   31.6   0.1    1.9  1  BRCT       BRCA1 C Terminus (BRCT) domain
    0.00022   21.1   0.0    0.00051   19.9   0.0    1.6  1  PTCB-BRCT  twin BRCT domain
  ------ inclusion threshold ------
      0.059   13.8   0.0       0.22   11.9   0.0    2.0  1  BRCT_2     BRCT domain, a BRCA1 C-terminus domain
       0.16   11.7   4.8       0.33   10.6   4.8    1.6  1  RGS-like   Regulator of G protein signalling-like domain
       0.51   10.6   8.1       0.23   11.7   3.8    2.6  2  DUF722     Protein of unknown function (DUF722)


Domain annotation for each model (and alignments):
>> NIF  NLI interacting factor-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       3.2   9.7e+03      48      75 ..     110     137 ..     107     146 .. 0.79
   2 !   97.4   0.0   2.3e-31   6.8e-28       2     151 ..     163     342 ..     162     348 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 3.2
         NIF  48 klyevvifTasseeyaeavidildpekk 75 
                 k + +v + +++ +++ a i++++++  
  KHJ33856.1 110 KDMTLVTWASANDDTVYAKINMIHNQTS 137
                 5677888999999999999999987754 PP

  == domain 2  score: 97.4 bits;  conditional E-value: 2.3e-31
         NIF   2 tLVLDLDetLvhskleks.k..................klkve.......gekvevsvlkRpgldefLkelsklyevvifTasseeyaeavidildpek 74 
                  LV+DLD+t++h++ e++ +                   ++++       +  + +++++Rpgl++fL+++s++ye+ ++T++++ ya ++ +i+dpek
  KHJ33856.1 163 SLVVDLDQTIIHACIEPTiGewqndptcpnyeavkevrSFQLNddwprgvTSGCWYYIKMRPGLKKFLNKISEMYELHVYTMGTRAYAMNIAKIVDPEK 261
                 69************977776888888888888777666333335456655555********************************************** PP

         NIF  75 kllshr.lyrescvkkkgeyvKdLsllgr.dlsrvvivDdspdsfelqpengipiksf.....fsdkkDneLlkllpllkelak 151
                 kl+++r ++r++     + ++K+Ls l   + + vvi+Dd++d++ ++  n++++ ++     ++d + + L k  +++k +++
  KHJ33856.1 262 KLFGDRiISRDEN---GSITTKSLSRLFPvSTKMVVIIDDRADVWPKNRPNLVKVVPYdfflgIGDINSSFLPKREEIFKIIDS 342
                 ******7777777...789********77799*************************987544458888888889999888774 PP

>> BRCT  BRCA1 C Terminus (BRCT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.1   5.3e-11   1.6e-07       6      79 .]     539     611 ..     535     611 .. 0.81

  Alignments for each domain:
  == domain 1  score: 31.6 bits;  conditional E-value: 5.3e-11
                 TTTEEEEEEESTSSHHHHHHHHHHHHTTCEEESSCSTTSSEEEESSSHSHHHHHHHHHH.TTSEEEETHHHHHHH CS
        BRCT   6 fhgckfvitgvldnftrdeleelikehGGkvttevskktthlvvgepesrslkylealk.lnipivheewlldci 79 
                 f+gc+++   +l  f+ + l +l  ++G++v++ vs+ +thlvv+++   s ++ +alk + i+iv+ +wl d+i
  KHJ33856.1 539 FDGCVIAT-AGLFIFNEELL-KLKTDFGARVVHNVSRSCTHLVVSSDSPCSDEVRQALKySHIKIVNKDWLRDSI 611
                 99999999.55555555555.5889**********************555557777776379***********97 PP

>> PTCB-BRCT  twin BRCT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.0   1.7e-07   0.00051      16      63 .]     556     606 ..     553     606 .. 0.92

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 1.7e-07
                 HHHHHHHTT-EEESSEETT-SEEEE..CSS-CHHHHHHHHCT.-EEE-CHH CS
   PTCB-BRCT  16 lqklieamGaeyskdltksvTHLic..ksgeGekyekAkkwg.ipvVsveW 63 
                 l kl +++Ga ++ ++++s+THL++   s+ ++  + A k   i++V+ +W
  KHJ33856.1 556 LLKLKTDFGARVVHNVSRSCTHLVVssDSPCSDEVRQALKYShIKIVNKDW 606
                 6688899******************888999**********99******99 PP

>> BRCT_2  BRCT domain, a BRCA1 C-terminus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   7.4e-05      0.22      22      84 ..     554     622 ..     550     623 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.4e-05
      BRCT_2  22 eklkklIeknGGevvetitsavyiviaesneee......laekrkrrvvspkyIkdCikkgkllpleny 84 
                 e+l kl +++G +vv++ +++ ++++++s +        + ++ + ++v+ ++++d+i+k +  +  +y
  KHJ33856.1 554 EELLKLKTDFGARVVHNVSRSCTHLVVSSDSPCsdevrqALKYSHIKIVNKDWLRDSINKWEKEDEMPY 622
                 5677788899****9999887666555554333589**9999****************99777666666 PP

>> RGS-like  Regulator of G protein signalling-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   4.8   0.00011      0.33     120     172 ..     401     453 ..     324     488 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00011
                 HHTT-GGGGTTTGGGG..--S-HHHHHHHHHHHHHHHHHHH...HTS-HHHHH CS
    RGS-like 120 rslGlgllegeldkldqevkkDrvkErrvaEqllskleeiletsstkeeeksa 172
                  s+G g  e+e  +l+q+v++++  E++  E+ l +++e+l +++t eee+s+
  KHJ33856.1 401 LSMGGGGGEDEARRLQQTVEQEKLLEKQFKERPLLQMQEKLDKEETEEEEQSK 453
                 57999999*********************************999998888765 PP

>> DUF722  Protein of unknown function (DUF722)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1         1   3.1e+03      17      57 ..     357     397 ..     344     433 .. 0.67
   2 ?   11.7   3.8   7.7e-05      0.23      30      96 ..     443     507 ..     432     515 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1
      DUF722  17 lqvkiksresryitrekvderiaygGtaenkesrvldkell 57 
                  q  i s+      +e++d++     + +n  +++l  ++l
  KHJ33856.1 357 EQGEIISITEDIDKPETNDDNKVLDQSENNDSQKILKADAL 397
                 55566666666666777777666666666666667776666 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 7.7e-05
      DUF722  30 trekvderiaygGtaenkesrvldkellikEeDkeliklkdqkellsellevltee.ekeiiklrykg 96 
                  +e+ +e  +    ++n e++v +k+ l+k++D el  l++++++l    +v+ ee +k+iik+ y++
  KHJ33856.1 443 KEETEEEEQSKVELSSNIEQNVHNKHNLLKDDDVELEYLEKHLTQLH---RVFYEEyDKAIIKAGYRN 507
                 45666666776778999**********************98877765...555666699***999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (848 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1636  (0.0912488); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.73u 0.29s 00:00:01.02 Elapsed: 00:00:00.44
# Mc/sec: 5795.37
//
Query:       KHJ33857.1  [L=425]
Description: putative 2-dehydropantoate 2-reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-29  103.2   0.0    1.7e-29  102.5   0.0    1.3  1  ApbA_C          Ketopantoate reductase PanE/ApbA C terminal
    3.9e-24   85.0   0.0    6.5e-23   81.1   0.0    2.1  1  ApbA            Ketopantoate reductase PanE/ApbA
  ------ inclusion threshold ------
      0.086   12.8   0.1       0.15   12.1   0.1    1.3  1  ResIII          Type III restriction enzyme, res subunit
      0.092   12.8   0.1       0.18   11.9   0.1    1.4  1  Cauli_DNA-bind  Caulimovirus DNA-binding protein


Domain annotation for each model (and alignments):
>> ApbA_C  Ketopantoate reductase PanE/ApbA C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.5   0.0   3.8e-33   1.7e-29       1     125 []     236     372 ..     236     372 .. 0.88

  Alignments for each domain:
  == domain 1  score: 102.5 bits;  conditional E-value: 3.8e-33
      ApbA_C   1 dirlarweKllinaainpltalldckngell....espelralvrallkEalavaeaeg........velseerleeaveavlektaanrsSMlqDvea 87 
                 dir  ++eKl++na +npl+al++c ng+l+    +   +r l+++l+ E+ +v+ ++          ++   ++e +v+ +++kt++n sSMlqDv++
  KHJ33857.1 236 DIRNFQMEKLVVNAIMNPLSALFRCENGKLFwvgtNRILVRSLMKRLISEINQVFVRLDglngpldpDRFAVGNMESMVTGIARKTRNNLSSMLQDVLH 334
                 78999**************************99955555789*************6555565444433344445************************* PP

      ApbA_C  88 grktEidyinGavvklAeklgvetPvnellyellkale 125
                 +r tEidyi G++v  +ek g+++  n++l+el+k++e
  KHJ33857.1 335 HRDTEIDYISGWIVSEGEKKGIDVRCNKKLIELVKKRE 372
                 **********************************9875 PP

>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.1   0.0   1.4e-26   6.5e-23       1     150 [.       8     207 ..       8     209 .. 0.92

  Alignments for each domain:
  == domain 1  score: 81.1 bits;  conditional E-value: 1.4e-26
                 EEEES-SHHHHHHHHHHHHHTHC..EEEE-SCH.HHHHHHHHCEEEEETT.CEEEEEECEEECCH.................................. CS
        ApbA   1 iailGaGaiGsllaakLakagad..vtlilrsr.rlealkknGlrltseg.geeilrppealsae.................................. 61 
                 i++lG+G +G+++a++L +a +   +tl+++++  ++++ ++  r+++ + +++i+  + + ++                                   
  KHJ33857.1   8 IHVLGLGNLGCFFAHCLRQADRItpITLLFHREsLYKDWDNAFQRISITTtEDFINDISYQNNNRasllsstsdpttsissafdiestfstnstisths 106
                 8****************88665567********9****************755544444444444778899**************************** PP

                 .......SCCCCS-ESEEEE-SSGGGHHHHHHHHGGGECTCEEEEEESSSSCHHHHHTTTS.....TTSEEEEEEEE-EEEEEETTEEEECS--EEEEE CS
        ApbA  62 .......ekselepidlvivtvKayqteealeeikplldpntvvlllqNGlgheeelreal.....pkprvlggvtthgatregpgevhhagkgeikig 148
                        ++ + +pi ++++++K++qt +al++ik++l++++ +l++qNGlg   e+ + l      +p  l+ +++hg++++gp++  +ag+g++ +g
  KHJ33857.1 107 segannyRSNDESPIYNLVLATKSFQTLDALSSIKHRLTDQSSILFVQNGLGIIPEINQVLfpdilTRPSYLVSLVSHGLYSSGPFKSILAGPGRVIFG 205
                 *******999*************************************************999*99999******************************9 PP

                 ES CS
        ApbA 149 el 150
                 ++
  KHJ33857.1 206 HI 207
                 86 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   3.3e-05      0.15      48     122 ..      24     112 ..      17     139 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.3e-05
                 H-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--...................-SEEEEEHHHHHHTH...... CS
      ResIII  48 llkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkka............kekdstnkkilvttiqsldadseee..e 122
                 l+++ ++  + +l +r+sl++ + ++f++++ +++++  +++s +++++            + +++ +++ +++t ++++ +s+e+  +
  KHJ33857.1  24 LRQADRITPITLLFHRESLYKDWDNAFQRISITTTEDFINDISYQNNNRasllsstsdpttSISSAFDIESTFSTNSTISTHSSEGanN 112
                 556666678899**********************9995555555555555899988888776677778888888888888888443331 PP

>> Cauli_DNA-bind  Caulimovirus DNA-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1     4e-05      0.18      15      75 ..     318     378 ..     307     384 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4e-05
                     HHHHHHHHHHHHHHHHTS--HHHHHHHHHHHHHHHHHHHHHT-TTHHHHHHHHTXXX..XXXX CS
  Cauli_DNA-bind  15 qkkieaeikaileklgstkpekesleevaakiikdltkkidececnkeiveildkkq..dkqi 75 
                      +k+++++ ++l+ +  +++  ++++ ++  i+++  kk  + +cnk+++e+++k++   +++
      KHJ33857.1 318 ARKTRNNLSSMLQDVLHHRD--TEIDYISGWIVSEGEKKGIDVRCNKKLIELVKKREklTEDL 378
                     5789999999**99999999..9******************************9977444555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      599  (0.0334096); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3201.19
//
Query:       KHJ33858.1  [L=786]
Description: putative gtpase-activating protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.2e-58  195.4   1.9    1.6e-57  194.6   0.0    2.2  3  RasGAP     GTPase-activator protein for Ras-like GTPase
    1.1e-26   93.6   5.3    1.1e-26   93.6   5.3    2.5  2  RasGAP_C   RasGAP C-terminus
  ------ inclusion threshold ------
        1.1    9.7   5.6        6.2    7.3   0.4    3.3  2  FlaC_arch  Flagella accessory protein C (FlaC)
        7.8    7.2   9.6         18    6.0   2.4    2.8  2  YabA       Initiation control protein YabA


Domain annotation for each model (and alignments):
>> RasGAP  GTPase-activator protein for Ras-like GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.3      0.27   1.2e+03      51      98 ..      46      85 ..      33     141 .. 0.60
   2 !  194.6   0.0   3.6e-61   1.6e-57       2     208 .]     191     398 ..     190     398 .. 0.95
   3 ?   -3.3   0.1       1.4   6.1e+03       8      36 ..     625     654 ..     618     676 .. 0.60

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.27
      RasGAP 51 lqkil.ekedlnlelDPrkiyeelkkkkesktgkksessgkksekease 98
                + +i+ +++dl++e D  k ++ l++ k +            ++k+   
  KHJ33858.1 46 YLSISaNEKDLEIEDDLAKAQKALRELKSEI---------SAQSKKNFM 85
                5556555666666666666666666665542.........222222222 PP

  == domain 2  score: 194.6 bits;  conditional E-value: 3.6e-61
      RasGAP   2 iseliklElessenpndllrsnsvvsklleeytkrpegqeyLkkilkpllqkilekedlnlelDPrkiyeelkkkkesktgkk.sessgkksekeasel 99 
                 ++++++++++++ ++++llr+n+ vs+++++yt+r+ gq+yLk +l++ +++++e +dl+le++P kiye+l++  e  t++  + +s++++++ a e+
  KHJ33858.1 191 FQSVLTYQFDNTPEYSSLLRANTPVSRMMTTYTRRGPGQSYLKTVLAGRINSLIELKDLDLEINPLKIYENLIDDTEDDTSELpDLLSKVDEAELAAEN 289
                 8999**********************************************************************9998877653556777788888888 PP

      RasGAP 100 ekvsqmleknldkLkelvneildsIfksleqlPvgiRiickqirekvkekfpdaseeeilnligsflflrfliPaivnPklfglvdkqiseeqrrnLtl 198
                 ++v+ ++  +l  L e++n +l++I++ le+ P+giR+ickqir ++k+k+pda+e+ i++lig+f+flrf++Paiv+Pk ++l+d  + e+ rr+Ltl
  KHJ33858.1 290 PQVEAIISPRLATLMEIANGFLSTIIEGLEETPYGIRWICKQIRSLTKRKYPDATEQIICTLIGGFFFLRFINPAIVTPKSYMLIDGVPAERPRRTLTL 388
                 88999999******************************************************************************************* PP

      RasGAP 199 iaKllqnlan 208
                 iaK+lqnlan
  KHJ33858.1 389 IAKMLQNLAN 398
                 ********97 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 1.4
      RasGAP   8 lEles.senpndllrsnsvvsklleeytkr 36 
                 +E ++  e +++++++ns +   l +y + 
  KHJ33858.1 625 QEKKKlEEVYKTIKDHNSYLVNQLDTYKNY 654
                 444443555666668888777777777655 PP

>> RasGAP_C  RasGAP C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   1.0      0.53   2.4e+03      39      59 ..      63      83 ..      22     126 .. 0.58
   2 !   93.6   5.3   2.5e-30   1.1e-26       2     136 ..     577     695 ..     576     696 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.53
    RasGAP_C 39 rnkgrlrekrkeElesleetl 59
                ++ +++ ++ k+E+++  +  
  KHJ33858.1 63 AKAQKALRELKSEISAQSKKN 83
                333333333333322222222 PP

  == domain 2  score: 93.6 bits;  conditional E-value: 2.5e-30
    RasGAP_C   2 velkkkalenlkeLeelgvisrennyqellneIakdirnkgrlrekrkeElesleetlktLseknnylesqlesYkayienvleqlkkkkgklpfskqy 100
                 v+++++a+e l++L+e++vi+ ++++  l +eI+++++++g+l+e + +E ++lee++kt++++n+yl +ql++Yk+y++nv++q +       ++k  
  KHJ33858.1 577 VRKGIRAMELLNQLQEMHVIDISDHFSLLRDEIEQELQHLGSLKEVVLQEKKKLEEVYKTIKDHNSYLVNQLDTYKNYLHNVRNQAEGP-----QRK-- 668
                 689**********************************************************************************7555.....233.. PP

    RasGAP_C 101 fkkrelkksgklpkfgsykysakqLeekgVLleieg 136
                          + ++ +g+yk+s++ Le +gV+ ++++
  KHJ33858.1 669 ---------QVKHILGPYKFSHQALERDGVIQQSNV 695
                 .........445899*****************9987 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.4    0.0014       6.2       4      39 ..      57      92 ..      56      95 .. 0.95
   2 ?    2.9   0.7     0.032   1.4e+02       3      31 ..     607     638 ..     606     663 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0014
   FlaC_arch  4 elEnklsklsteletvkkeneelsksveelkenVkd 39
                e+E +l k +  l  +k+e++  sk+  +l+++V+ 
  KHJ33858.1 57 EIEDDLAKAQKALRELKSEISAQSKKNFMLEKDVRY 92
                89*******************************986 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.032
   FlaC_arch   3 delEnklsklst...eletvkkeneelsksve 31 
                 de+E++l+ l +    +   kk++ee+ k+++
  KHJ33858.1 607 DEIEQELQHLGSlkeVVLQEKKKLEEVYKTIK 638
                 79999999998844333333445555555554 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   2.4     0.004        18      12      53 ..      57     110 ..      51     128 .. 0.76
   2 ?    4.4   0.8     0.013        58       5      53 ..     597     656 ..     593     678 .. 0.56

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.004
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH............X CS
        YabA  12 eleeqleelleeleelkeelaelleenaeLeleneklrerl............e 53 
                 e+e++l++ ++ l+elk+e+++  ++n  Le + + l +r+            +
  KHJ33858.1  57 EIEDDLAKAQKALRELKSEISAQSKKNFMLEKDVRYLDSRIalliqnrmaieeQ 110
                 68999*******************************999997777654433221 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.013
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHHHH.......X CS
        YabA   5 elfdkleeleeqleelleeleelkeel....aelleenaeLeleneklrerl.......e 53 
                 ++ d+++ l +++e+ l++l++lke +    ++l e  ++++  n+ l ++l       +
  KHJ33858.1 597 DISDHFSLLRDEIEQELQHLGSLKEVVlqekKKLEEVYKTIKDHNSYLVNQLdtyknylH 656
                 677777888888888888888888755221134444455666666666666643333221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (786 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1302  (0.0726198); expected 358.6 (0.02)
Passed bias filter:                      624  (0.0348039); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.73u 0.28s 00:00:01.01 Elapsed: 00:00:00.44
# Mc/sec: 5314.79
//
Query:       KHJ33859.1  [L=328]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.38   11.1   5.0       0.39   11.1   0.9    2.7  3  ATG_C     Autophagy-related protein C terminal domain
       0.62   10.6  10.6        1.6    9.3  10.5    1.7  1  DUF4786   Domain of unknown function (DUF4786)


Domain annotation for each model (and alignments):
>> ATG_C  Autophagy-related protein C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1     0.078     7e+02      12      62 ..      67     117 ..      62     128 .. 0.82
   2 ?   11.1   0.9   4.3e-05      0.39      29      92 ..     133     196 ..     124     199 .. 0.89
   3 ?   -2.3   0.0      0.67     6e+03      65      94 ..     243     273 ..     222     274 .. 0.56

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.078
       ATG_C  12 reGlqqAysslskglksaaqtilavpsevaeskgakgavkavvravPvavl 62 
                 r+  + A  +++++l+   + + + +s+ ++ +  + ++k+v ++ P  v+
  KHJ33859.1  67 RDTREAAAAGIKDKLRIILTGVNESNSKTSQTNRKTMTLKKVSHKKPEKVI 117
                 555567888999999999999999999999999999999999988887776 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 4.3e-05
       ATG_C  29 aaqtilavpsevaeskgakgavkavvravPvavlrPligateavsktlqGvrnqldpearkese 92 
                 + q+ +a++++++++k ++++ ++v+r+ P +  +P++ a+  +    + v+n++  e+ k++e
  KHJ33859.1 133 TNQDSMAIETKNQTKKAVQSSWTEVIRRNPKTHTKPTQTAVTHTVANHKPVSNAITVEETKQDE 196
                 567789999*******************************999999999999999888888776 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.67
       ATG_C  65 ligateavsktlqGvrnql.dpearkesedK 94 
                 + +a+ea+ ++l+     l d +++ e   K
  KHJ33859.1 243 VTAASEAARNLLLQEARVLkDLDMKLEPASK 273
                 3455666666554433333355665555555 PP

>> DUF4786  Domain of unknown function (DUF4786)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3  10.5   0.00018       1.6      61     135 ..      92     170 ..      73     185 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00018
     DUF4786  61 patetktpfkklpipfvsnGkPsrvyqwngavlkkalkkkpkfasvlaadrnrlldiesiptwrk.....gkaklkkplk 135
                  + +++t++k+++++ vs  kP++v  ++++ + + + k+p++++++a + +++++ + +++w +     + ++  kp +
  KHJ33859.1  92 NSKTSQTNRKTMTLKKVSHKKPEKVIDLTTTQTRSDMGKRPTNQDSMAIETKNQTKKAVQSSWTEvirrnP-KTHTKPTQ 170
                 3344569********************************************************87666544.33333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1627  (0.0907468); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.39
# Mc/sec: 2535.61
//
Query:       KHJ33860.1  [L=557]
Description: putative pxa domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-44  151.5   3.0    5.3e-44  150.4   2.6    1.8  2  PXA       PXA domain
  ------ inclusion threshold ------
      0.061   13.9   0.0       0.61   10.7   0.0    2.5  2  Nexin_C   Sorting nexin C terminal
       0.29   11.1   1.6       0.53   10.3   0.0    2.2  3  vWF_A     von Willebrand factor


Domain annotation for each model (and alignments):
>> PXA  PXA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.4   2.6   8.9e-48   5.3e-44       1     182 []      86     271 ..      86     271 .. 0.96
   2 ?   -3.3   0.0       1.3   7.6e+03     123     141 ..     524     542 ..     493     547 .. 0.62

  Alignments for each domain:
  == domain 1  score: 150.4 bits;  conditional E-value: 8.9e-48
         PXA   1 speldeelhellalilrdfVlsWYskissdeeFptevrsilrsviralanrlkkvDlaqllltrlldlltshlrdyrqaeekvkskkaeeesdldlaak 99 
                 s+e+d +l++++a+i+r+f+++WY+ki+sd+ F++e+ +i+++++ral++rl+kvDl +ll++++++ll+ h++++  ++ ++++      ++ d ++ 
  KHJ33860.1  86 SNEVDLQLYAFIAIIIREFIQTWYQKITSDQIFVEELVNIFAHCTRALEQRLRKVDLESLLFDEIPELLEIHINAFHLSHLSLHQPP----LEHDPRQI 180
                 689******************************************************************************999987....58****** PP

         PXA 100 ffalephpalsavlrd.......ieeskeaelaylrslverlLslllppedlesetvrtlvreilanvvlkpll.eklsdPdfinqliikl 182
                 ++ l+p p ls+v+ +       ++e++++e+ y   lv+ +L+lllp+edle++++r+lv+eil++++l+ ++ ek+s+P+ +++ i kl
  KHJ33860.1 181 YHLLWPIPSLSPVPINdlqnvvsKQEQTKNESFYRHLLVQGVLALLLPTEDLENDCLRSLVTEILSESILGEVIgEKVSEPWILWEGITKL 271
                 **********99998899***988888899*********************************************************9986 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.3
         PXA 123 elaylrslverlLslllpp 141
                  + +l  +ve lL  l+p+
  KHJ33860.1 524 NKHFLYGIVELLLVRLMPE 542
                 4666666666666666665 PP

>> Nexin_C  Sorting nexin C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.22   1.3e+03      15      47 ..     226     258 ..     178     320 .. 0.60
   2 ?   10.7   0.0    0.0001      0.61       6      85 ..     406     491 ..     402     498 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.22
     Nexin_C  15 qqllgdtierwlkekiekltseeavaslikklr 47 
                 +++ +d  ++ l++ + ++ se+ + ++i +  
  KHJ33860.1 226 LLPTEDLENDCLRSLVTEILSESILGEVIGEKV 258
                 333334444444444444444444444444333 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.0001
     Nexin_C   6 altvlkqvlqqllg......dtierwlkekiek.ltseeavaslikklrdalWPdgeskaesaperseeeklrtraearklLlellp 85 
                 +l++l+ v +++ g      + i++ l  +i++ + ++ ++ +l+++ r al+P++  +a +++  +e+e ++ r+++ +++l l+p
  KHJ33860.1 406 MLSMLQWVALTGPGnigqtdGIIDKILSYTIQThILTTTTLPNLLRNARAALFPNN-LPAGQSEAPNEAECMAIRRRCAESILDLIP 491
                 6667777777777777778789************999*****************98.444455667777777777777777777666 PP

>> vWF_A  von Willebrand factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.2     7e+03      31      43 ..      50      62 ..      44      65 .. 0.85
   2 ?   10.3   0.0   8.9e-05      0.53      37      64 ..     100     128 ..      80     144 .. 0.75
   3 ?   -2.8   0.3         1   6.1e+03      14      31 ..     283     300 ..     277     307 .. 0.51

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.2
       vWF_A 31 dtasYsnvRrfln 43
                d+a  s+vRr+l 
  KHJ33860.1 50 DRATLSFVRRILC 62
                89999*****985 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 8.9e-05
       vWF_A  37 nvRrflne.gqlppkdavrvEeliNyFdy 64 
                 ++R+f+++  q++++d++ vEel+N F  
  KHJ33860.1 100 IIREFIQTwYQKITSDQIFVEELVNIFAH 128
                 4799999845799**************76 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1
       vWF_A  14 kfksvaeeplstfsidvd 31 
                 k+k+  ++ +st s  v 
  KHJ33860.1 283 KTKTPMNQSVSTTSSTVS 300
                 444445555555554443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (557 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 4071.90
//
Query:       KHJ33861.1  [L=459]
Description: putative ubiquitin-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-20   71.8   0.0    1.9e-19   69.3   0.1    2.4  2  Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like


Domain annotation for each model (and alignments):
>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.19   3.4e+03      33      62 ..     287     316 ..     278     318 .. 0.78
   2 !   69.3   0.1     1e-23   1.9e-19       2      69 ..     382     449 ..     381     455 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.19
                 HHT----TT-EEEETTEE--TTSBGGGSS- CS
   Rad60-SLD  33 kkgipeeqkvrLiFDGeeLdpnstvedldi 62 
                 k g p e+ + ++  G++L +  t+++l++
  KHJ33861.1 287 KSGKPLEEVIFFTWRGKRLFDVTTCGSLGL 316
                 455566688889999999999999999887 PP

  == domain 2  score: 69.3 bits;  conditional E-value: 1e-23
                 EEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEE CS
   Rad60-SLD   2 kiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtid 69 
                 k+ilk+kd ++ ki V+pttt++k++ea+rk++ ipe++k+ L FDG+ Ldpnst+ed+++ d d +d
  KHJ33861.1 382 KLILKAKDMEPCKIVVRPTTTIKKMAEAFRKAMAIPESTKISLHFDGDLLDPNSTIEDTELGDVDNVD 449
                 79**********************************************************99988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (459 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1079  (0.0601818); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 3539.02
//
Query:       KHJ33862.1  [L=554]
Description: putative cation diffusion [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-21   76.5  11.6    2.8e-21   76.2  11.6    1.1  1  Cation_efflux  Cation efflux family
    1.8e-06   28.0   0.0    3.5e-06   27.1   0.0    1.4  1  ZT_dimer       Dimerisation domain of Zinc Transporter
  ------ inclusion threshold ------
      0.065   13.0   1.1        2.1    8.1   0.0    2.2  2  Pox_VLTF3      Poxvirus Late Transcription Factor VLTF3 like


Domain annotation for each model (and alignments):
>> Cation_efflux  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.2  11.6   4.6e-25   2.8e-21       2     190 ..     268     450 ..     267     459 .. 0.89

  Alignments for each domain:
  == domain 1  score: 76.2 bits;  conditional E-value: 4.6e-25
  Cation_efflux   2 ilsllanlilalvelivglltnSlalladafhslsdlvsllllllalklsrkppderfpfGygrlevlgalvsgllllglavfllleaiqklikeg 97 
                    +++l+an++l++ ++++ lltnSl++la  + + +dl+s+ +++ + +l+ k   + +p G+  le+lg l+ +++++   +++ l+ i +l + +
     KHJ33862.1 268 YVNLVANVTLLITKITTILLTNSLSVLASLVDAALDLLSTGIVWTTSRLIEKRDQYSYPIGRRSLEPLGVLIFSVIMITSFFQVGLQCIARLNSDN 363
                    789***********************************************9999***************************************888 PP

  Cation_efflux  98 ereihaglalvval.vslvvnlalllilrragrklrsaalkaaalhvlgDaltslgvlvsalvillfnlksgplaDpvaslligliilysalkl 190
                    +  i   l +++   + ++v+l++++ +r +    +++ ++a a+++++D++ ++  ++  lv ++ +l    ++D++++ll++l+i++++  +
     KHJ33862.1 364 HTIIQLTLPAIIPMsATVIVKLLCWFWCRMV----KNSGVQALAQDAMTDVVFNIFSIIFPLVGFYAKL---WWFDALGGLLLSLYIVINWSTT 450
                    8888888877775515566777777777776....9**************************9999844...48**************997655 PP

>> ZT_dimer  Dimerisation domain of Zinc Transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   5.8e-10   3.5e-06      17      77 ..     480     539 ..     465     540 .. 0.89

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 5.8e-10
                 SS-EEEEEEEEE-S----EEEEEEEE-TTS-HHHHHHHHHHHHHHHHHH-TT--EEEEEEE CS
    ZT_dimer  17 pgvkgvhdlrtrksGskifvdlhievdgdlsvkeaHeiadevekrikeefpgvadvliHve 77 
                 + +k+++ l++ + G+k++v++++++d++++++++H++ + ++  + e++p v + ++H +
  KHJ33862.1 480 KTIKQIQGLQAYHCGDKLYVEVDVVLDEQMTLRDSHDLGESLQYVL-ESVPIVDRAFVHQD 539
                 4688999999********************************9988.58899998999975 PP

>> Pox_VLTF3  Poxvirus Late Transcription Factor VLTF3 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.6     0.013        76      87     157 ..     119     189 ..     113     194 .. 0.73
   2 ?    8.1   0.0   0.00035       2.1      11      43 ..     475     507 ..     468     536 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.013
   Pox_VLTF3  87 lssleeklikdiFdelteifdklvkknerknfinysy.vLykllellgvnenlkdfallknneklanndeiw 157
                 l ++ ek  k   del + ++ ++k +er+n +  +y ++++ll+     + l++++ + +++ ++  ++++
  KHJ33862.1 119 LRYEWEKYWKT-RDELKKMRNPIRKYYERTNKLIQNYiYIDRLLDSSLPHDLLNEYSNVGSYTFQHDDQKLC 189
                 55556665555.678888888888888888776666537******999899999998888887776666655 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00035
   Pox_VLTF3  11 tvhfrdvlkrlqgkqttkiseevldelkkklkk 43 
                 t+ f + +k++qg q ++++++ + e++  l++
  KHJ33862.1 475 TMRFAKTIKQIQGLQAYHCGDKLYVEVDVVLDE 507
                 57899*******************999877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       571  (0.0318478); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.38
# Mc/sec: 4336.25
//
Query:       KHJ33863.1  [L=388]
Description: hypothetical protein EV44_g3354 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       533  (0.0297284); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2876.73
//
Query:       KHJ33864.1  [L=390]
Description: putative acid phosphatase-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.5e-34  117.5   0.1    1.3e-32  113.4   0.1    2.1  1  Phosphoesterase  Phosphoesterase family
  ------ inclusion threshold ------
      0.034   13.5   0.0      0.049   13.0   0.0    1.2  1  Sulfatase        Sulfatase


Domain annotation for each model (and alignments):
>> Phosphoesterase  Phosphoesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.4   0.1   1.5e-36   1.3e-32     110     356 .]      45     270 ..      20     270 .. 0.87

  Alignments for each domain:
  == domain 1  score: 113.4 bits;  conditional E-value: 1.5e-36
  Phosphoesterase 110 lwelaqeftlcDryFssvlggtepNrlflisgtsdpsGteggpsladpkktvlkgftqktigerLsekgvswaiYqeal......dnlakskva 197
                      +++la++  l  +y+ +v+++++pN+l+ + g +     +g ++    + tv  + +++ti++ L++k ++w+ Y e++      ++ +k +  
       KHJ33864.1  45 IKDLASQGILLTQYY-GVTHPSQPNYLASVGGDY-----FGLDH----DGTVTIPRNVSTIVDLLDTKFIDWRGYFEDIpgpgymGPVSKRPDG 128
                      589999********9.******************.....99977....99*****************************865555555555544 PP

  Phosphoesterase 198 pfnyyvrklkklearrkalkqlglaakq..lekfkkdvkngkLPqvsfikpngandeHpgadvaagdklikevlealtsspq.waktllivtyD 288
                      +  +yvrk+++  ++++  ++ +  +k   + +f++d+k+++LPq+  + pn+ nd+H++ + +++ ++++++l+ l s+++ +++tl+++tyD
       KHJ33864.1 129 KHFDYVRKHNPFVSYDSINRNGSRLSKVlsFRDFERDIKANNLPQYMHLSPNMLNDGHDT-SSSFAIDWTSKFLKPLLSNKYfMNRTLILLTYD 221
                      9999*******9988886666655555569******************************.889999*************************** PP

  Phosphoesterase 289 EngGfyDhVappvapvsdpdglkGdpyglgvrvPllviSpyakkgtvdhelfdhtSvlrfiekrfglp 356
                      E+ +  D    p       + +    + lg  vP  +      +gtvd++l+ h+S+l++ie++++lp
       KHJ33864.1 222 ESRTM-D---KP-------NQI--TSILLGDAVPKNL------QGTVDNTLYTHYSILSTIENNWDLP 270
                      ***97.3...33.......222..3568899998766......68*********************96 PP

>> Sulfatase  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   5.5e-06     0.049      24     136 ..      40     149 ..      32     211 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 5.5e-06
                 CSSHHHHHHHHTSEEESSEE-SSSSHHHHHHHHHHSS-HHHHTHSSCCSTTTHHCTTTS-HHHHHHHH.....TT-EEEEEEES-SCCSGGGSHHCCTT CS
   Sulfatase  24 attpnldrlaeeglrftnfysaaplcspsraalltgryphnsgvasntevgggglpqteatLpellke.....aGYntaaigkwhlgwssrqsvyknrg 117
                 a++ ++++la +g+++t++y +  ++ ps ++ l +   + +g  ++   g++ +p++++t+++ll       +GY   + g+  +g+ s+    ++  
  KHJ33864.1  40 ANNSQIKDLASQGILLTQYY-G--VTHPSQPNYLASVGGDYFGL-DHD--GTVTIPRNVSTIVDLLDTkfidwRGYFEDIPGPGYMGPVSKRP--DGKH 130
                 567899**************.4..89***************993.333..3389***********9873333358988888988888888887..6888 PP

                 TSEEEETSSSCHHTCCCCC CS
   Sulfatase 118 fdrflgfptgsaalkdpek 136
                 fd++ ++++  ++++ + +
  KHJ33864.1 131 FDYVRKHNPFVSYDSINRN 149
                 8888887776666655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (390 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2887.84
//
Query:       KHJ33865.1  [L=4082]
Description: putative e3 ubiquitin-protein ligase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   5.6e-130  433.6   0.2   5.6e-130  433.6   0.2    3.8  4  DUF913           Domain of Unknown Function (DUF913)
   3.7e-103  345.7  11.8   3.7e-103  345.7  11.8    3.2  3  DUF908           Domain of Unknown Function (DUF908)
      2e-95  319.8   0.1    6.6e-95  318.1   0.0    2.0  2  HECT             HECT-domain (ubiquitin-transferase)
    5.4e-25   86.0  13.9    2.9e-09   36.0   3.0    4.1  3  UBM              Ubiquitin binding region
    0.00027   20.8   0.0    0.00067   19.5   0.0    1.8  1  UBA              UBA/TS-N domain
  ------ inclusion threshold ------
        3.3    7.6  12.2         13    5.6  12.2    2.2  1  Spore_coat_CotO  Spore coat protein CotO


Domain annotation for each model (and alignments):
>> DUF913  Domain of Unknown Function (DUF913)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  433.6   0.2  1.9e-133  5.6e-130       2     368 .]     582    1021 ..     581    1021 .. 0.91
   2 ?   -3.4   1.7       1.2   3.7e+03     288     300 ..    2387    2413 ..    2311    2544 .. 0.60
   3 ?   -7.3   8.7         6   1.8e+04     248     289 ..    2861    2925 ..    2847    2963 .. 0.36
   4 ?   -2.8   0.0      0.79   2.4e+03     224     242 ..    3673    3691 ..    3672    3699 .. 0.82

  Alignments for each domain:
  == domain 1  score: 433.6 bits;  conditional E-value: 1.9e-133
      DUF913    2 ravrvlDtlitniqnafqafanakgldalidrledevdealeevkegkgtpaelrssvvdyeipfqrqqlLKslLkfikhlmqss...gsgtdrllr 95  
                  +++++lD+++++ ++ fq++++a+gl+a+++++ ++v++a e+v++gkgtp+e+rs vvdyeip+++qq++K+l+kfi+hlm+ +   g+++drllr
  KHJ33865.1  582 MVLTFLDNVMYSARDGFQTLVEADGLNAISNLIIYQVRTAAENVSAGKGTPQEFRSAVVDYEIPYYQQQTIKWLFKFIHHLMSATggfGGNFDRLLR 678 
                  79*********************************************************************************99************ PP

      DUF913   96 nlidssqLlksLrkIienakvfGssvwslAvnilsdfihnePtslavlqeaglteslLeal.................................... 156 
                  nlidssqLl+sLr+Ii na+++Gs vw++Av il+dfi+nePts+ v++eagl++++Lea+                                    
  KHJ33865.1  679 NLIDSSQLLASLRQIIGNANCYGSIVWTNAVLILNDFINNEPTSYVVIAEAGLSKVFLEAVtgrmitasdeskveeiptestnsgdattsssphied 775 
                  ************************************************************************************************* PP

      DUF913  157 ........................lakgilpsrEvlasiPnvlsalcLNnaGlelfksskaleslfeifespehvkamesdgdlasnlGssfdELvR 229 
                                          lakgilp++E+++++P++++a+cLN+aG+++f++s+al+s+feifespehvk+m+++++l+++lGssfdEL+R
  KHJ33865.1  776 dsdeetphverlsltmlkatrkgpLAKGILPTSETISIVPQAFNAICLNTAGMKMFQASNALQSFFEIFESPEHVKCMDTHKELPATLGSSFDELAR 872 
                  ************************************************************************************************* PP

      DUF913  230 hhpsLktaiikavikmlarvvelgkeka......akllved......assasskseasssssssetkeeekssededvemedaeeetesesd...es 311 
                  hhp Lk++ii a+++m+arv++l+++ a      akl+  d          ++ s+a + s++ + ++e+ s+  +dvem+d +++++ + +   ++
  KHJ33865.1  873 HHPGLKNSIIIAIVNMVARVEYLCSSRArenmlgAKLWSMDnagkiiV---AN-SDAMEPSNDPKINQEA-SDVTTDVEMHDIDADPDINLNntsNT 964 
                  **************************************9996653221...11.1122222222222222.66677788888844443333300023 PP

      DUF913  312 eeseeekeknslldyilnvakFLeallsnnslcreFvekgGiellldlltlpslPyd 368 
                  +e ++ + ++++++yi ++++FL+++l n+s  + F+  gGie +l+l ++psl yd
  KHJ33865.1  965 NEMTPGALQTNMTPYICATINFLSSILGNTSIRTGFCVMGGIENVLSLSQSPSLEYD 1021
                  33333466667*******************************************997 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.2
      DUF913  288 k.................ssededvemeda 300 
                  +                 s    d e+ed 
  KHJ33865.1 2387 RnstlgmfehgtedsesqS---GDNEDEDM 2413
                  0333333333332221110...11111111 PP

  == domain 3  score: -7.3 bits;  conditional E-value: 6
      DUF913  248 rvvelgkeka...akllvedassasskseasssssssetkeeek............................s 289 
                  r+++l+ +k+            + +++++a++++ ++e+ke+e+                            +
  KHJ33865.1 2861 RLEKLAADKKaeeE--------RLEKEAKANEEKLAEEKKEQEElqaaerpdegnvtevtqvdnadfepaneN 2925
                  45555555552221........111111111111111111111122222222222223333222222221111 PP

  == domain 4  score: -2.8 bits;  conditional E-value: 0.79
      DUF913  224 fdELvRhhpsLktaiikav 242 
                  + ELvRh p+L +  ++ +
  KHJ33865.1 3673 LNELVRHTPKLMSGTFSLL 3691
                  68*********88777665 PP

>> DUF908  Domain of Unknown Function (DUF908)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  345.7  11.8  1.2e-106  3.7e-103       2     358 .]     106     518 ..     105     518 .. 0.93
   2 ?   -6.9   3.6         6   1.8e+04     180     225 ..    2888    2949 ..    2855    2963 .. 0.41
   3 ?    0.0   2.8      0.15   4.5e+02     171     340 ..    3374    3550 ..    3345    3552 .. 0.53

  Alignments for each domain:
  == domain 1  score: 345.7 bits;  conditional E-value: 1.2e-106
      DUF908   2 dkelvlaiLrftrlLLenCgNrsiYnSsehLndLLnttdldvllatLrlllrlaqrysasnkrtksasrtvqqallanhynisldrllklAqpfpktpv 100
                 d+elv+++L+f+r+L++nCgNr +Y+Ss+hL +LLntt+l++l++tL l+++laqry+++ kr++ + r+ +++ll++hyni ld++ klA pf++++ 
  KHJ33865.1 106 DRELVESVLNFSRILIQNCGNRTVYASSSHLDNLLNTTSLSLLESTLYLGSELAQRYQSAIKRMSVTTRHLHNSLLQSHYNIPLDKVIKLALPFSRIVK 204
                 9************************************************************************************************87 PP

      DUF908 101 sdssakaasek.....................kastteyaldlvslakedskv....................lpsewgdvkvtYYkkssseeqkaesk 158
                 +++++++++++                     + +tt  a+d++ +++++ +v                     +s+wgdvk+ +Y+k +s+ ++a++ 
  KHJ33865.1 205 NSTENSHQNSSlnpglkgkektpqslltsspkNPTTTICANDIMTMVRDGISVkrtskttysgtedashqtetCWSDWGDVKLIFYPKLHSDVEAATDL 303
                 77766666666********************98999999**********99999***************************************999988 PP

      DUF908 159 sskeeaseslissspstPtplrrssklgk...ts....sspsspaktstpskaaksqeglk....tfeipesevsskslyellakavekiPkesryell 246
                 ss++  +       pstP p+rrss+lg+   +s    ss+s  a+++ ++++++++e+l+    ++eip+s++ s++++++l++ +  + ke +yell
  KHJ33865.1 304 SSNNIPA-----ITPSTPSPVRRSSNLGPrgqRStkisSSESPLATSPCSKAHQSTDETLRpsykIIEIPQSTLLSTDIHSILRENITGLSKELKYELL 397
                 8655544.....47**************9876225676344444455555555666666666677********************************** PP

      DUF908 247 hririakalnssseeRqqllaiRllAitnlayihpesefqtkllkqdpd......lvyqLaeLihpe...esevprelqtaaleaLealarkkaklsdv 336
                  ++ria+al+s  e+R+q++aiR+lAi+nlayi+p+s fq+ ++k++ +      lv+qLaeL+hp    e +vpr+lq++a+ aLe l  +++k+s+v
  KHJ33865.1 398 VKLRIAYALTSCLETRRQIVAIRILAIINLAYIYPDSLFQDLVMKHEIEqprrlqLVHQLAELVHPPtdgEIAVPRKLQALAFVALEVLQGHQSKVSEV 496
                 ********************************************************************988**************************** PP

      DUF908 337 lsaLnanvnhGiLlyvlRkava 358
                 ++aLn+nvnhG+Llyv+Rkava
  KHJ33865.1 497 SAALNTNVNHGVLLYVVRKAVA 518
                 ********************97 PP

  == domain 2  score: -6.9 bits;  conditional E-value: 6
      DUF908  180 rrssklgk..ts................sspsspaktstpskaaksqeglktfeipesevssks 225 
                  ++++k ++  ++                +   +p +++++++a++s eg +t e+pes+ s++s
  KHJ33865.1 2888 AEEKKEQEelQAaerpdegnvtevtqvdNADFEP-ANENQEAAPESMEGVET-ELPESNNSTQS 2949
                  2222222111001112222222232232111111.22233333333444434.55555544433 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.15
      DUF908  171 sspstPtplrrssklgkts......sspsspakt.stpskaaksqeglktfeipesevss..kslyellakave.kiPkesryellhririakalns 257 
                   sp+t  + +++s  +  +      + p s++ + ++  +++++q+++++ ++p  + +   k l++  + + +  iP ++  +l   i +a+  + 
  KHJ33865.1 3374 ASPETSNTNNEQSLDM--HvrpdnsDLPPSTQISsTQVVTTPAEQSSANLADVPIAKAEDmsKHLEKKQRAISQpVIP-DNNLKLVINIFVARECS- 3466
                  2222222222222222..123343433323222202233333444444455544444444215566665555555555.56678999999999999. PP

      DUF908  258 ssee.RqqllaiRllAitnlayihpesefqtkllkqdpdlvyqLaeLihpee.sevprelqtaaleaLealarkkaklsdvlsaL 340 
                   s++ R++l  i+ l+ +  a ++   e+ +k     + ++++L +L+ + +  +  +e+q++al+  +   ++++kl  vl+aL
  KHJ33865.1 3467 -SKTfRETLSTIKNLSAIPDAKAVFGRELVNKAQFLGNIILQELEDLLLHIQkANSGTEIQAIALAKISPGGSDQNKLLRVLTAL 3550
                  .444499999999876555555544444444444444457777777765553366677777777777777777777777777776 PP

>> HECT  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       1.6   4.7e+03     153     225 ..     585     661 ..     539     665 .. 0.65
   2 !  318.1   0.0   2.2e-98   6.6e-95       2     306 ..    3777    4081 ..    3776    4082 .] 0.95

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.6
                 GGGHHHHHHHHHHHHTTS-HHHHTTS-HHHHHHHHBCSS...S..--HHHHHHTEE.EETT--TTSHHHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...x.xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx RF
        HECT 153 ksvekqleaflkGfsevipskalklfdaeelellisGed...e.lidvedlrrnte.ykggynaesetiewlweilke 225
                 + +++ +++ ++Gf+++++++ l++++   + ++    +       + +++r+ ++ y+  y  +++ti+wl++ +++
  KHJ33865.1 585 TFLDNVMYSARDGFQTLVEADGLNAISNLIIYQVRTAAEnvsAgKGTPQEFRSAVVdYEIPYY-QQQTIKWLFKFIHH 661
                 556666667778888888777777666655555544444444334677888876651444444.57999999999877 PP

  == domain 2  score: 318.1 bits;  conditional E-value: 2.2e-98
                  HHHHHHT-GGGSSEEESSTTSSSEEE-TTHHHHS.....HHHHHHHHHHHHHTT--BSS-B-HHHHHHHTT-.---TCHHHHH-HHHHHHHHHHH.. CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT    2 llskelldpklglfeeesedsgtlypkpssseee.llklfeflGkvlGkaiyeeilldlpfsraflkfllgeekitledleeidpelakslkellsl 97  
                  +ls++++dp + lf   s+d+ t++p++ ss +e +l  f+f+G+++Gka+ye+++ld +fsra++k +lg + ++l+d+e++dp+++ksl ++l  
  KHJ33865.1 3777 VLSRQMFDPGYALFIPVSSDRTTFHPNQLSSVNEeHLMFFKFIGRIIGKALYEGRVLDCHFSRAVYKRILG-KSVSLKDMESLDPDYYKSLIWML-- 3870
                  699***********99999********998776687789********************************.6**********************.. PP

                  HS-GGG...GT-BSEEEEE.TTEEEEEESSTTGGGSB--TTTHHHHHHHHHHHHHTGGGHHHHHHHHHHHHTTS-HHHHTTS-HHHHHHHHBCSSS. CS
                  xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT   98 esnteevedlaLtFtipen.agasatieLipnGanipVtnenkkeYiklyvnyllkksvekqleaflkGfsevipskalklfdaeelellisGedel 193 
                  e++ +++  +  tF+++++ +g ++ti+ ipnG+ni+Vt+enk+eY++l+v+++l  sv++ql++flkGf++++p++++++f+++elellisG  e 
  KHJ33865.1 3871 ENDITDI--MTETFSVDSDkFGVNETIDFIPNGRNINVTEENKHEYVRLMVEWRLTGSVKEQLDEFLKGFHDIVPADLVSIFNEQELELLISGLPE- 3964
                  5666544..666*****99****************************************************************************9. PP

                  --HHHHHHTEEEETT--TTSHHHHHHHHHHHHS-HHHHHHHHHHHHSSSS--TTCGGG-.....B--EEEEE-S..-TTS--EEEGGGTEEEE---S CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT  194 idvedlrrnteykggynaesetiewlweilkefspeekrlfLqFvTgssrlPlgGfael.....hpkftierkskedetrLPtahTCfnlLklpdYs 285 
                  idv+d++ ntey+  y+a+s++i+w w+++++f++ee++++LqFvTg+s++Pl+Gf+el      ++f i+r    +++rLP++hTCfn+L++p+Y+
  KHJ33865.1 3965 IDVDDWKGNTEYH-NYTASSPQIQWYWRAVRSFDKEERAKLLQFVTGTSKVPLNGFKELegmngFSRFNIHRDY-GNKNRLPSSHTCFNQLDIPEYE 4059
                  ************5.5********************************************9999999******66.99******************** PP

                  SHHHHHHHHHHHHHHH.H--XX CS
                  xxxxxxxxxxxxxxxx.xxxxx RF
        HECT  286 skeilkekLltAieet.egFel 306 
                  s+eil+++LltAi+ + e F++
  KHJ33865.1 4060 SYEILRQQLLTAITAGsEYFGF 4081
                  ***************9777876 PP

>> UBM  Ubiquitin binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.6   1.5e-10   4.6e-07       4      34 ..    2969    2999 ..    2967    3000 .. 0.92
   2 !   36.0   3.0   9.8e-13   2.9e-09       3      35 .]    3007    3038 ..    3004    3038 .. 0.88
   3 !   26.3   0.1   1.2e-09   3.5e-06       4      34 ..    3055    3086 ..    3052    3087 .. 0.85

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 1.5e-10
         UBM    4 pppegiDpsFLaaLPpdLReEVLaqqdeeql 34  
                  +++ giD++FL  LP+++ReEV+++  +e++
  KHJ33865.1 2969 ITDLGIDADFLSELPEEIREEVIMSAVAERR 2999
                  67889*********************99998 PP

  == domain 2  score: 36.0 bits;  conditional E-value: 9.8e-13
         UBM    3 apppegiDpsFLaaLPpdLReEVLaqqdeeqlr 35  
                  a+p e iD +FL+aLP+d+R E+++q++++++r
  KHJ33865.1 3007 AQPSE-IDQEFLNALPDDIRDEIIQQERRDRRR 3038
                  45555.*************************97 PP

  == domain 3  score: 26.3 bits;  conditional E-value: 1.2e-09
         UBM    4 pppegiDp.sFLaaLPpdLReEVLaqqdeeql 34  
                  p + ++D+ ++La+L+p  R +VL++qde +l
  KHJ33865.1 3055 PSVGDMDAaTILATLDPTFRNQVLMEQDEATL 3086
                  44455***********************9887 PP

>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   2.2e-07   0.00067       7      30 ..    1511    1534 ..    1506    1540 .. 0.91

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 2.2e-07
                  HHHHHTTS-HHHHHHHHHHTTTSH CS
         UBA    7 qrLveMGFdreevveALratgnNe 30  
                  ++L++ G++++ v eAL++++nN+
  KHJ33865.1 1511 TTLLDQGYPESLVNEALYRCNNNI 1534
                  589********************8 PP

>> Spore_coat_CotO  Spore coat protein CotO
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6  12.2    0.0045        13      33     121 ..    2861    2947 ..    2837    3044 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0045
  Spore_coat_CotO   33 keekkqaaakekkd..eae.ekkpekaveeeveqekkkeaaePaeqeeeekaeeeekkeeeeqkeeeeekqetveaekPeqearkPprrkrf 121 
                       + ek +a +k +++  e+e + ++ek +ee+ eqe+ + a+ P e ++ e  + ++ + e++++++e +++ + +      e++ P+++ + 
       KHJ33865.1 2861 RLEKLAADKKAEEErlEKEaKANEEKLAEEKKEQEELQAAERPDEGNVTEVTQVDNADFEPANENQEAAPESMEGV-----ETELPESNNST 2947
                       333333322222220022203334555677799999999*******************999999988877776655.....44444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (4082 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1482  (0.0826594); expected 358.6 (0.02)
Passed bias filter:                      620  (0.0345808); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 2.09u 0.31s 00:00:02.40 Elapsed: 00:00:00.56
# Mc/sec: 21920.21
//
Query:       KHJ33866.1  [L=909]
Description: putative zinc finger protein dhhc domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (909 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1474  (0.0822132); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.90u 0.35s 00:00:01.25 Elapsed: 00:00:00.55
# Mc/sec: 4980.73
//
Query:       KHJ33867.1  [L=210]
Description: putative protein bli-3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.3e-22   78.0   0.0    7.6e-22   77.5   0.0    1.2  1  Pyrid_ox_like   Pyridoxamine 5'-phosphate oxidase like
    6.7e-08   32.6   0.0    1.1e-07   31.9   0.0    1.4  1  Putative_PNPOx  Pyridoxamine 5'-phosphate oxidase
    0.00058   19.9   0.1      0.001   19.1   0.1    1.4  1  STb_secrete     Heat-stable enterotoxin B, secretory
  ------ inclusion threshold ------
      0.073   13.1   0.0       0.12   12.4   0.0    1.3  1  DUF1521         Domain of Unknown Function (DUF1521)


Domain annotation for each model (and alignments):
>> Pyrid_ox_like  Pyridoxamine 5'-phosphate oxidase like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.5   0.0   1.7e-25   7.6e-22       1     147 [.      30     185 ..      30     187 .. 0.91

  Alignments for each domain:
  == domain 1  score: 77.5 bits;  conditional E-value: 1.7e-25
  Pyrid_ox_like   1 eavkklkelvkdiktamLtttea.dgklksrPMatqkveedg.dlwfltkkdsdkvkeirkdsqvnlafsdeskkkyvsvsGtaevvedrakieel 94 
                    ++v+ l + v+++k++++tt+++ +g l sr M +++ e dg dl f+t++++ kv++i+ d++vn+ f d s+ +++s++G+ ++ ++  ++ ++
     KHJ33867.1  30 DKVRDLSKFVDSCKFGIMTTRDSsSGALFSRCMVVAAKEVDGvDLIFFTNTETGKVNHIKSDPHVNVSFLD-SSGQWASFAGETSIITESGIVAKY 124
                    678999**************98758899************9988**************************9.778********************* PP

  Pyrid_ox_like  95 Wspvvkawf........pegkddpnltlikvtpeeaeyWdsksgklvsllkmakaavtgkk 147
                    +s+++kaw         + + +dp+l +ikv+  +  y  ++++ ++  +k+a+ avtg++
     KHJ33867.1 125 YSSMLKAWIgdlgdgkhDGSPNDPRLGIIKVRSRTITYAITSNNAITRGFKVAQGAVTGNS 185
                    ********733322222346789************************************87 PP

>> Putative_PNPOx  Pyridoxamine 5'-phosphate oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.0   2.5e-11   1.1e-07       6      86 ..      36     117 ..      28     119 .. 0.87

  Alignments for each domain:
  == domain 1  score: 31.9 bits;  conditional E-value: 2.5e-11
                     HHHHHHSSEEEEEEEE.TTSEEEEEEEEEEEETTT.TEEEEEEETTSHHHHHHHHH-EEEEEEEETTGSEEEEEEEEEEEESC CS
  Putative_PNPOx   6 reflaeskavvlATvd.edGrPnvspvllkagdgr.dgivfatnadsrklrnleenprvallflddelgrgvrieGtaelvsd 86 
                      +f+ ++k++ ++T d  +G   ++ +  +a   +   ++f+tn+++ k+ +++++p+v+++fld + g++ ++ G+  ++++
      KHJ33867.1  36 SKFVDSCKFGIMTTRDsSSGALFSRCMVVAAKEVDgVDLIFFTNTETGKVNHIKSDPHVNVSFLDSS-GQWASFAGETSIITE 117
                     58999*********99778***999999666555544799**************************9.9********999987 PP

>> STb_secrete  Heat-stable enterotoxin B, secretory
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.1   2.2e-07     0.001      19      46 ..      40      67 ..      27      69 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 2.2e-07
  STb_secrete 19 esCkkGfLGvrDGtaGaCfGaqimvaak 46
                 +sCk G +  rD  +Ga f   ++vaak
   KHJ33867.1 40 DSCKFGIMTTRDSSSGALFSRCMVVAAK 67
                 7**************************9 PP

>> DUF1521  Domain of Unknown Function (DUF1521)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   2.7e-05      0.12      23      51 ..      67      97 ..      58     120 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.7e-05
     DUF1521 23 dekdgt..ilirnektgevtrikGdPhvdan 51
                +e dg   i   n +tg+v +ik dPhv++ 
  KHJ33867.1 67 KEVDGVdlIFFTNTETGKVNHIKSDPHVNVS 97
                5556541145689***************984 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1559.53
//
Query:       KHJ33868.1  [L=773]
Description: putative 3-isopropylmalate dehydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   4.5e-159  530.3   0.0   5.5e-159  530.0   0.0    1.1  1  Aconitase    Aconitase family (aconitate hydratase)
    8.8e-37  126.4   0.0    1.6e-36  125.5   0.0    1.4  1  Aconitase_C  Aconitase C-terminal domain


Domain annotation for each model (and alignments):
>> Aconitase  Aconitase family (aconitate hydratase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  530.0   0.0  6.2e-163  5.5e-159       1     461 []      13     472 ..      13     472 .. 0.97

  Alignments for each domain:
  == domain 1  score: 530.0 bits;  conditional E-value: 6.2e-163
   Aconitase   1 ekiwdahlvee..eg..iayvpdrvllqdvtgvqalvdlaaareavrrlggtlatidhlvpvdlvidhsvgaeealeknledefernkeryefLksaak 95 
                 +k++++h+v+e  +g  ++y+ +r+l+++vt++qa+++l++a+++vrr+++tlat+dh++p++     s ++ +++++ +e+e +r   ++ +L+++ k
  KHJ33868.1  13 DKVFQDHVVDErlDGtcLLYI-NRHLVHEVTSPQAFEGLRNAGRKVRRPDCTLATTDHNIPTT-----SRKNLKNIASFVEQEDSR--LQCITLEKNVK 103
                 699****99776766778888.*****************************************.....666778899999999999..9********** PP

   Aconitase  96 afgirvvppg...qGIvHqvnlEyglalpgktvvgtDSHTtmigglGvlaiGvGgieaeavllgqplelkipkvvgvkltGklkegvtakDlvlavigk 191
                 +fgi+++ ++   qGIvH +++E+g++lpg tvv++DSHT+++g++G+la+G+G++e+e+vl++q+l l++ k+++++++G l++gvt+kD++l++igk
  KHJ33868.1 104 EFGITYFGLKdkrQGIVHIIGPEQGFTLPGSTVVCGDSHTSTHGAFGALAFGIGTSEVEHVLATQTLILRRSKNMRIQVDGPLNPGVTSKDVILHTIGK 202
                 *******999999************************************************************************************** PP

   Aconitase 192 lrkkgvvgkvvEffGegvesLsledraTiaNMaaEvGAttglfpvdektleYLkatgreeaav.lveaydkaqalf.elaadedaeydkvleldlstle 288
                 ++++g++g v+Ef+G+++esLs+e+r++i+NM++E+GA++g++++de t+eYL+  +r+ a++   +++++a +++ +l++d++a+yd  + +d+++++
  KHJ33868.1 203 IGTAGGTGMVIEFCGTTIESLSMEARMSICNMSIEAGARAGMIAPDEITFEYLR--NRPLAPKfGSDEWNNAIKYWrSLKSDPNAKYDVNVFIDAKDVA 299
                 ******************************************************..******98889*********77********************* PP

   Aconitase 289 psvagpkrPqdavplselvk.k.efkeelekeaaekaley.klkegtklkdgkvdiaaigSCTNssnedvraaagllakavekglkvkpgv.ktsvaPG 383
                 p+v+++++P+da+p+++ v+ + +f++e +++a ++ ley +lk+gt+l+d+ +d+++igSCTN+++ed+raaa++++     g+kv+p+v +++++PG
  KHJ33868.1 300 PTVTWGTSPEDAIPITSCVPdPeSFSTEEKRAAGRRMLEYmDLKPGTRLEDVLIDKVFIGSCTNGRIEDLRAAAAIVK-----GRKVAPNVkRAMIVPG 393
                 *******************98558******************************************************.....********99****** PP

   Aconitase 384 SevvkayleaeGlleiLekaGfevvgagCstCig.nsdrleegeaivsssNRNFegRqgpntrayLaSPelvvaaAlaG 461
                 S+ vk+++eae l ei+ +aGfe+++agCs+C+g n+d l++ge+++s+sNRNFegRqg+++r++L+SP+ ++a A++G
  KHJ33868.1 394 SGLVKERAEAEALAEIFIDAGFEWREAGCSMCLGmNPDVLQPGERCASTSNRNFEGRQGAGGRTHLVSPATAAACAITG 472
                 *****************************************************************************98 PP

>> Aconitase_C  Aconitase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.5   0.0   1.8e-40   1.6e-36       2     130 ..     538     659 ..     537     660 .. 0.94

  Alignments for each domain:
  == domain 1  score: 125.5 bits;  conditional E-value: 1.8e-40
                  CCCCCCTT--CHHHHSTGGGCCGHCCHHHCCCGGTTTCCCCTTTSBBSEEEETTTTEEEEHHHHHHHHHHTT--EEEE--SSBTBS---THHHHHHHH CS
  Aconitase_C   2 ekllklkGlttedeksnvdtdlkipkqfegtianiglgnelveekrankttdlddgekedvvdaaerykkegaklvviagknfGeGSSRehAAkalrl 99 
                  +k+  lkG ++ +++ nvdtd++ipkqf++ti+++glg +l++  r+n +     +e+ d+++++e+y+  +ak++v++  nfG+GSSRehA++al +
   KHJ33868.1 538 PKFNILKGYAAYLDRVNVDTDAIIPKQFLKTIKRTGLGTALFHSLRYNLD----GSENSDFILNKEPYR--QAKILVAG-SNFGCGSSREHAPWALHD 628
                  578899*************************************8887755....55799**********..*****999.****************** PP

                  TTEEEEEES-B-HHHHHHHHHTT-EEEEEST CS
  Aconitase_C 100 lGikaviaeSFerIfennliknglLplefke 130
                  +Gi  +ia+SF++If nn +kng+Lp+ + +
   KHJ33868.1 629 FGIDCIIAPSFADIFFNNTLKNGMLPIAITN 659
                  ***************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (773 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       384  (0.0214178); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.23s 00:00:00.85 Elapsed: 00:00:00.40
# Mc/sec: 5821.85
//
Query:       KHJ33869.1  [L=308]
Description: putative histone-fold containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.1e-10   39.2   3.6    1.9e-09   37.4   0.1    2.9  3  TFIID-18kDa  Transcription initiation factor IID, 18kD subuni


Domain annotation for each model (and alignments):
>> TFIID-18kDa  Transcription initiation factor IID, 18kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   0.1   1.1e-13   1.9e-09       2      41 ..      19      58 ..      18      65 .. 0.95
   2 ?   -0.3   0.1      0.06   1.1e+03      68      85 ..     161     178 ..     144     185 .. 0.83
   3 ?    0.5   0.0     0.035   6.3e+02      17      50 ..     200     233 ..     195     238 .. 0.86

  Alignments for each domain:
  == domain 1  score: 37.4 bits;  conditional E-value: 1.1e-13
                 --CCCCHHHHHCTTS-SS--HHHHHHHHHHHHHHHHHHHH CS
  TFIID-18kDa  2 lfrkelqsmlyalGdvkePlqetvqlledlvrgyliellq 41
                 ++r+e+q+m+y++G+  e   et+ ++e++vr+++ie+++
   KHJ33869.1 19 KYRTEIQQMMYVSGETAEASVETTGMIEEIVRQQVIEMIN 58
                 7*************************************86 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.06
                  XXXXXXXXXXXXXXXXXX CS
  TFIID-18kDa  68 kkKlnRlkellslkellk 85 
                  + K+   +e+++++e+++
   KHJ33869.1 161 RTKVMTKEEYVTWSEYRQ 178
                  679999999****99984 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.035
                  -SS--HHHHHHHHHHHHHHHHHHHHHHHC-XXXX CS
  TFIID-18kDa  17 vkePlqetvqlledlvrgyliellqqaakvaklr 50 
                  + +P ++ v++l  l  + +  l+++a k+ +++
   KHJ33869.1 200 DSRPNDDIVDILGFLTFEIVQTLTEEALKIKEQE 233
                  67899999*******************9998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1179  (0.0657594); expected 358.6 (0.02)
Passed bias filter:                      575  (0.0320709); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2320.37
//
Query:       KHJ33870.1  [L=160]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.054   13.8   4.6      0.074   13.3   4.6    1.2  1  DUF3807        Protein of unknown function (DUF3807)
      0.084   12.2   0.3      0.084   12.2   0.3    2.8  3  zf-RanBP       Zn-finger in Ran binding protein and others
          6    7.0  12.2         47    4.1  12.2    2.4  1  DZR            Double zinc ribbon


Domain annotation for each model (and alignments):
>> DUF3807  Protein of unknown function (DUF3807)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   4.6   1.2e-05     0.074      53     104 ..      95     147 ..      93     160 .] 0.59

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.2e-05
     DUF3807  53 TDeQIaiFRHS...EieallRereleeeesekekkeeeeeeedkeaadkessqes 104
                 T eQ++i+RH    E +a+lR+r  ee++  ++++ ++e ++++ +++ ++++++
  KHJ33870.1  95 TKEQMRIYRHAgdrEHQAVLRARAAEENA-VSIENMNAELTSSQMQEN-TKTTDN 147
                 89********8777**********77666.444444333333322222.222221 PP

>> zf-RanBP  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2      0.77   4.6e+03      21      25 ..      33      37 ..      33      41 .. 0.60
   2 ?   12.2   0.3   1.4e-05     0.084      12      28 ..      61      77 ..      60      79 .. 0.91
   3 ?    3.1   0.1      0.01        61      10      23 ..      73      86 ..      73      86 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.77
                -TTT- CS
    zf-RanBP 21 CvaCq 25
                C +C 
  KHJ33870.1 33 CKRCN 37
                56665 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 1.4e-05
                -EEESSSSB-TTT--BT CS
    zf-RanBP 12 vqNfawstkCvaCqapk 28
                ++Nf+ +tkC +C++p+
  KHJ33870.1 61 TDNFLAATKCRNCGGPN 77
                68************996 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.01
                S--EEESSSSB-TT CS
    zf-RanBP 10 ClvqNfawstkCva 23
                C+  N++ s kC+a
  KHJ33870.1 73 CGGPNRSDSRKCLA 86
                5556********86 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1  12.2    0.0079        47       9      45 ..      27      84 ..       8      86 .. 0.65

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0079
         DZR  9 ppdarfCseCgtklkavaa......................edrCpsCgekvdpearfC 45
                +++ +fC++C+ + +a  +                      +++C +Cg ++ +++r C
  KHJ33870.1 27 QQSLEFCKRCNGHHPAK-NcsraplfgncgstnhatdnflaATKCRNCGGPNRSDSRKC 84
                55667999998887632.23566566666666666666666777777777777666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1215  (0.0677673); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.43
# Mc/sec: 1115.13
//
Query:       KHJ33871.1  [L=468]
Description: putative chalcone synthase c protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.2e-23   81.1   0.0    1.5e-22   80.3   0.0    1.3  1  Chal_sti_synt_C  Chalcone and stilbene synthases, C-terminal 
    2.7e-18   66.2   0.1    4.2e-18   65.6   0.1    1.2  1  Chal_sti_synt_N  Chalcone and stilbene synthases, N-terminal 
    4.1e-06   26.9   0.0    1.2e-05   25.4   0.0    1.8  1  ACP_syn_III_C    3-Oxoacyl-[acyl-carrier-protein (ACP)] synth
    8.4e-06   25.3   0.0    1.2e-05   24.7   0.0    1.3  1  FAE1_CUT1_RppA   FAE1/Type III polyketide synthase-like prote
  ------ inclusion threshold ------
      0.032   14.1   0.1      0.074   12.9   0.1    1.6  1  ACP_syn_III      3-Oxoacyl-[acyl-carrier-protein (ACP)] synth


Domain annotation for each model (and alignments):
>> Chal_sti_synt_C  Chalcone and stilbene synthases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.3   0.0   4.1e-26   1.5e-22       9     148 ..     240     383 ..     234     386 .. 0.84

  Alignments for each domain:
  == domain 1  score: 80.3 bits;  conditional E-value: 4.1e-26
  Chal_sti_synt_C   9 flPetdgvidgklteeGltfkllrdlPekieenieeflkklleklGie.....efndlfwivhPGGpaildrleaklklekekleasrkvlsey 97 
                      ++ ++d+ +    + +G ++ l   +P++  e +      l+  l        e  d  w++hPGG++il  +e++l+l +e+++as ++ +++
       KHJ33871.1 240 IISNSDADLRFDAHPNGWKVVLSPRVPKLACEIVKPSFDILMSSLPNLppnyrEAADFDWALHPGGSTILTGVEKELNLTPEHMRASYDIYMNH 333
                      56667777777777778888888888888888888777777776654333344888999*********************************** PP

  Chal_sti_synt_C  98 GnvssatvlyvldelrdkelkkklattgegkewGlllafGPGltietlllr 148
                      Gn ssat++ vl +lr++++ ++ a +g+ k++ ++ afGPG+++et +l+
       KHJ33871.1 334 GNSSSATIISVLSRLREQDM-NECAPNGKVKDFVVGCAFGPGISVETCMLK 383
                      *****************665.6778889*******************9986 PP

>> Chal_sti_synt_N  Chalcone and stilbene synthases, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.6   0.1   1.2e-21   4.2e-18      73     221 ..      63     218 ..      29     221 .. 0.85

  Alignments for each domain:
  == domain 1  score: 65.6 bits;  conditional E-value: 1.2e-21
  Chal_sti_synt_N  73 ileenPeltaemapsldarleivnaevlklgkeaalkalkewGrPkskithlvfvsssevelPGadlklakklGlrpsvkrvmlyflGcygGat 166
                      + +++P +  +  + +++  ei  ++ + l+ +aa+kal+e      +ith+v  + ++   PG d ++ k lG+ + v+rv l   Gc+gG +
       KHJ33871.1  63 VPADHPLVNMDRPAYISELSEIFLKDGVALAVSAARKALHEAQISPFEITHMVSTTCTNSANPGYDHYVMKGLGITQPVERVLLQGIGCSGGLA 156
                      457899999999999***************************99999*********************************************** PP

  Chal_sti_synt_N 167 vlrlakdiaenn..kG..arvlvvaseitvlgfrgPskdrl...ddlvGaalfGdGaaavii 221
                      ++r+a ++a     +G  ar+lv+a ei  l  r+  ++ +   +  +G +lf d a++ ++
       KHJ33871.1 157 AIRTAANLALAHtfRGrpARILVTAVEICSLMIRSELNSIVetgETRIGVTLFSDCASSLVL 218
                      ******9875432244449***************9987755111678**********99876 PP

>> ACP_syn_III_C  3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   3.2e-09   1.2e-05       9      89 ..     295     383 ..     290     384 .. 0.85

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 3.2e-09
                    GG-SEEEE-SSSHHHHHHHHHHHT--GG..GB--TH.HHH-B-GGGHHHHHHHHHHHTT......SS-TT-EEEEEEEETTTEEEEEEEE CS
  ACP_syn_III_C   9 edidalvphqanlriidavakklglpee..kvvvnl.deyGntsaasiplaLdeaveeg......klkpgdlvllvgfGaGltwgaallr 89 
                    +d+d+  +h    +i+  v k+l+l++e  ++ +++ +++Gn s+a+i+  L+++ e+       + k  d v+ ++fG G+++  ++l+
     KHJ33871.1 295 ADFDWA-LHPGGSTILTGVEKELNLTPEhmRASYDIyMNHGNSSSATIISVLSRLREQDmnecapNGKVKDFVVGCAFGPGISVETCMLK 383
                    566664.6888999**************886666666********************987766666677899***********9998876 PP

>> FAE1_CUT1_RppA  FAE1/Type III polyketide synthase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   3.4e-09   1.2e-05      88     177 ..      94     187 ..      33     240 .. 0.80

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 3.4e-09
  FAE1_CUT1_RppA  88 fgavdellaktkvspkdidilvvncslfsptPslsamvvnryklredvksynLsgmGCsAglisidlaknllqvhk....ntlalvvstEnitl 177
                     ++a  + l+++++sp +i  +v  + + s++P     v++  ++ + v+ + L g+GCs gl +i  a nl  +h      +  lv ++E ++l
      KHJ33871.1  94 VSAARKALHEAQISPFEITHMVSTTCTNSANPGYDHYVMKGLGITQPVERVLLQGIGCSGGLAAIRTAANLALAHTfrgrPARILVTAVEICSL 187
                     5666788999***********************************************************9977664332234556666666654 PP

>> ACP_syn_III  3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   2.1e-05     0.074       6      65 ..     150     224 ..     147     235 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.1e-05
                  GGGHHHHHHHHHHHHHHT....TS-SEEEEEEEEEGGGCS-TT.........THHHHTTB-EEEEEEEEEEE..S CS
  ACP_syn_III   6 aCsgfvyalsvAdalies....gaakrvLvigaetlskilDwk.........drstavlfGDGAgAvvleas..e 65 
                  +Csg ++a+ +A++l  +    g+  r+Lv + e++s ++  +          r  ++lf+D A  +vl+++  +
   KHJ33871.1 150 GCSGGLAAIRTAANLALAhtfrGRPARILVTAVEICSLMIRSElnsivetgeTRIGVTLFSDCASSLVLSNGlgH 224
                  6***********99976522226777***********999886555555443477777***********998643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       301  (0.0167884); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3408.19
//
Query:       KHJ33872.1  [L=229]
Description: putative isoprenylcysteine carboxyl methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-10   40.3   2.0    4.2e-08   33.5   0.3    2.4  2  ICMT        Isoprenylcysteine carboxyl methyltransferase (ICM
    2.8e-06   26.3   0.1      4e-06   25.9   0.1    1.4  1  ERG4_ERG24  Ergosterol biosynthesis ERG4/ERG24 family
    8.2e-06   26.2   2.9     0.0069   16.8   2.9    2.5  1  PEMT        Phospholipid methyltransferase
  ------ inclusion threshold ------
       0.04   13.4   0.7      0.082   12.4   0.7    1.6  1  DUF1295     Protein of unknown function (DUF1295)
        6.2    6.6  10.3        2.5    7.9   1.4    2.3  2  DUF4013     Protein of unknown function (DUF4013)


Domain annotation for each model (and alignments):
>> ICMT  Isoprenylcysteine carboxyl methyltransferase (ICMT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.5   0.3   1.2e-11   4.2e-08       5      72 ..     103     169 ..      97     180 .. 0.79
   2 !    6.2   0.1    0.0038        14      68      93 ..     182     207 ..     174     208 .. 0.75

  Alignments for each domain:
  == domain 1  score: 33.5 bits;  conditional E-value: 1.2e-11
        ICMT   5 vllaqalrlvvmatlGeiwttrvailpdhklvksglykylrHPnYllf.vilelatllLlcnakltalv 72 
                 +  a + r+++ a+lG+++t r+a+ ++  l+k+g y+y++HP+Y++  ++ ++ +  +l     +a++
  KHJ33872.1 103 IFTAAISRMAAYAQLGKNFTYRLATPSG--LIKTGFYAYVQHPSYTALlIVASVNGFTMLRLDSSLACI 169
                 4568899****************98765..9**************976155678777777666566665 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0038
        ICMT  68 ltalvllalvalllfvRikeEekaLa 93 
                 l+ ++++++v++ll  R+++Ee+++ 
  KHJ33872.1 182 LIGIFMTLAVVALLHCRVRDEETMMK 207
                 455666666777777*******9986 PP

>> ERG4_ERG24  Ergosterol biosynthesis ERG4/ERG24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.1   1.1e-09     4e-06     344     432 .]     124     229 .]      57     229 .] 0.78

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 1.1e-09
  ERG4_ERG24 344 qtktGskLlvsGWyglarkinYlgDwlqslswsLatgfq..................svlpyfyvlyFlvlLvhRelRDeek.CkkkYGedweeYkkkv 423
                 + +t s L+ +G+y++++++ Y++ ++++ +    t +                   ++l   ++   +v L+h ++RDee   k  +G++wee+++k 
  KHJ33872.1 124 RLATPSGLIKTGFYAYVQHPSYTALLIVASVNGF-TMLRldsslacitpryiaaatwNPLIGIFMTLAVVALLHCRVRDEETmMKSAFGTEWEEWNRKT 221
                 5678899*****************9887765443.33336788889999***999998888899999999*********98725779**********99 PP

  ERG4_ERG24 424 pykiipyvy 432
                 + k+ip+++
  KHJ33872.1 222 K-KFIPFLF 229
                 8.7888876 PP

>> PEMT  Phospholipid methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   2.9   1.9e-06    0.0069       7      62 ..     100     151 ..      94     213 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.9e-06
        PEMT   7 lllialglllvlssiealgefgtfygdfFlelmdklvtsGiYrylnnPeyvgstlg 62 
                 ++ i++ ++ +++++ +lg++ t+       + + l+++G Y y+++P y++ +++
  KHJ33872.1 100 FVTIFTAAISRMAAYAQLGKNFTYRL----ATPSGLIKTGFYAYVQHPSYTALLIV 151
                 677889999999***********955....45789***************976553 PP

>> DUF1295  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.7   2.3e-05     0.082     118     175 ..      93     151 ..      48     221 .. 0.61

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.3e-05
     DUF1295 118 kaldviglalwlvgivlealaDqQl.safkkdpankgkvldsGLwrysRHPNYfgeali 175
                 +++ ++  + + ++ +  ++a +Ql ++f + +a    ++++G++ y  HP Y +  ++
  KHJ33872.1  93 STTTILYFVTIFTAAISRMAAYAQLgKNFTYRLATPSGLIKTGFYAYVQHPSYTALLIV 151
                 3333333444445666778899999568*************************764443 PP

>> DUF4013  Protein of unknown function (DUF4013)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   1.4    0.0007       2.5     103     129 ..      95     121 ..      44     127 .. 0.86
   2 ?    3.4   2.1     0.017        61      42     102 ..     130     193 ..     125     200 .. 0.54

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0007
     DUF4013 103 lllllfglllpvalarfartgslsaaf 129
                 +++l+f +++++a+ r+a++ +l++ f
  KHJ33872.1  95 TTILYFVTIFTAAISRMAAYAQLGKNF 121
                 45677999999************9987 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.017
     DUF4013  42 kllvdGlkafvvslvYllipliialltllvalaslaagdsaa.....gallvlallglllalllvl 102
                 +l+ +G+ a+v    Y+ + ++   ++++++++ l+++ + +     +a++   l+g++++l +v+
  KHJ33872.1 130 GLIKTGFYAYVQHPSYTALLIVA--SVNGFTMLRLDSSLACItpryiAAATWNPLIGIFMTLAVVA 193
                 78999************444444..33344443333333333211114444444444444444322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1678.17
//
Query:       KHJ33873.1  [L=98]
Description: hypothetical protein EV44_g3770 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.11   12.3   0.0       0.22   11.4   0.0    1.5  1  YhdX      Uncharacterized YhdX-like


Domain annotation for each model (and alignments):
>> YhdX  Uncharacterized YhdX-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   1.2e-05      0.22      10      22 ..      79      91 ..      71      94 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.2e-05
        YhdX 10 ERIKvETDAEMfK 22
                    vE DAEMfK
  KHJ33873.1 79 NVAVVEVDAEMFK 91
                55569*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (98 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       319  (0.0177924); expected 358.6 (0.02)
Passed bias filter:                      233  (0.0129957); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 726.78
//
Query:       KHJ33874.1  [L=1407]
Description: putative rnb domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-82  277.5   0.3    1.5e-82  277.5   0.3    2.4  3  RNB            RNB domain
    2.3e-26   91.6   0.0    5.5e-26   90.4   0.0    1.7  1  OB_Dis3        Dis3-like cold-shock domain 2 (CSD2)
      5e-24   84.4   0.0    1.7e-23   82.7   0.0    2.0  1  Dis3l2_C_term  DIS3-like exonuclease 2 C terminal
      9e-07   29.0   0.0     0.0074   16.4   0.0    2.9  2  CSD2           Cold shock domain
  ------ inclusion threshold ------
      0.059   13.1   0.0       0.21   11.3   0.0    1.9  1  Rrp44_CSD1     Rrp44-like cold shock domain


Domain annotation for each model (and alignments):
>> RNB  RNB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.6       1.4   5.1e+03     227     277 ..     389     438 ..     383     442 .. 0.68
   2 !  277.5   0.3   4.3e-86   1.5e-82       1     325 [.     759    1091 ..     759    1092 .. 0.94
   3 ?   -1.0   0.1      0.25   8.8e+02     122     169 ..    1252    1323 ..    1248    1358 .. 0.69

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 1.4
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 227 eepsnekledliklakklglklednsskknlqeslekleeeeaeqllsell 277
                 +++++ ++++++ + +  +++ + n   ++l+++ ++ ++++ ++l+ ++l
  KHJ33874.1 389 QQLNPMQMNQFQAMQA-TQINGHMNHGSNQLNQLTSTQQQQQRKTLFTPYL 438
                 4677888889998888.8888555555556777777777666666666655 PP

  == domain 2  score: 277.5 bits;  conditional E-value: 4.3e-86
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB    1 RkdlrdllvitIdpedakdlDdAisieklpngnyelgVhIADvshyvkegspldkearkratsvyLpekvvpMLPqelsedlcSLnpgedrlalsvl 97  
                  R+d+r  +v+tId ++++++D+Ai+i+k ++g +e+g+hI+Dv+h+vk +s +d+ea++r+t+vyL ++++ ML +++++++cSL pgedr ++s++
  KHJ33874.1  759 RRDFRGEKVFTIDLNGTNEFDNAIHIKKDNDGSIEIGIHISDVTHFVKANSLVDREAKRRGTAVYLMNRSCAMLHPKIATQICSLIPGEDRFTISLI 855 
                  99*************************999******************************************************************* PP

                  xxxxxx.xxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB   98 idvdek.gev..lsveiylsvIkskarltydevqdlleqkdeke.ekktaedLellyelakalrkkRlkkgalefdspeikllldedkgnrielkve 190 
                  ++v+ +  ++  ++v+i++s+I+s+ +l+y ev+++l + ++++ ++ ++e+++ l+ +a+++r  Rlk++   + +    ++ld+ ++ ++e ++ 
  KHJ33874.1  856 FKVKTDnLSLltDEVWIGKSIINSTGKLSYAEVNTVLSGHPTAKlNEIEIEQIKILHAVAQNWRGIRLKTNEEAV-PLRLIYQLDD-ENVKVEQNIF 950 
                  ****99766546889**************************9998878*********************977666.6799999999.6667888889 PP

                  xxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB  191 eetkahslveelmllANelvArfl.seleipailriheepsnekledliklakklglk.lednsskknlqeslekleeeeaeqllselllrllkeak 285 
                  +++ +h+l eelm+ +N  vA+ l + l+++a+lr++ +p+ ++l+ + +     ++  + d +s ++lq+sl k+e+ ++++ ++ ll++++ +ak
  KHJ33874.1  951 NSSPSHELFEELMIKTNFYVAQRLfKDLPEKALLRRQGPPNTQRLQAFSDRMC--KIFpEIDITSSESLQNSLCKVEDADVRKGMETLLVKTMHRAK 1045
                  9999*******************99***********************98666..233567888999****************************** PP

                  xxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB  286 yssep......vgHfgLaleeYthfTSPirRYpDlvvhrllkalla 325 
                  y  +        +H++L+l+ YthfTSP+rRY+Dlvvhr+l a+l+
  KHJ33874.1 1046 YCISGrtpahlYPHYALNLPLYTHFTSPLRRYADLVVHRQLDAILS 1091
                  **888999999********************************997 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.25
                  xxxxxxxxxxxxxxxxx.xxx..................xxxxxxxxxxxxxxxxxxxxxxxxxxx.....x RF
         RNB  122 ltydevqdlleqkdeke.ekk..................taedLellyelakalrkkRlkkgalef.....d 169 
                  ++ d+v++l+++ d+ + +++                   +++L+++ +l++  + +R  ++  ++     +
  KHJ33874.1 1252 ISTDDVDALFDDDDDISdAAEglsgvslierptqsvppsPKNSLHTFDTLHRTQSDSRVHTTEASVtaesaQ 1323
                  78899999998888887554499999999999999999999**********999999998876677333220 PP

>> OB_Dis3  Dis3-like cold-shock domain 2 (CSD2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.4   0.0   1.5e-29   5.5e-26       2      77 .]     652     727 ..     651     727 .. 0.98

  Alignments for each domain:
  == domain 1  score: 90.4 bits;  conditional E-value: 1.5e-29
                 EEE--SSTTS--EEEETTSSTTTHHHHTTTTTT--EEEEE----TT-SS-EEEEEEE-HHHHHHHHHHHHHHHHTT CS
     OB_Dis3   2 vlfkPldkrlPriliptkelpeeflenpeelegklfvvkidsWsetsryPlGeivksLGeagdieaeteaiLleng 77 
                 v+fkP+dkr+P i ipt+++p +f+e+++++++ +fv+ i++W++ts +P+G++v++LG++g+i++etea+L +n+
  KHJ33874.1 652 VWFKPTDKRVPLIAIPTEQAPRDFIEKHQDYADRIFVASIKRWPITSLHPFGTLVEQLGKMGEIKVETEALLRDNN 727
                 9***********************************************************************9996 PP

>> Dis3l2_C_term  DIS3-like exonuclease 2 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.7   0.0   4.8e-27   1.7e-23       1      71 [.    1143    1214 ..    1143    1230 .. 0.90

  Alignments for each domain:
  == domain 1  score: 82.7 bits;  conditional E-value: 4.8e-27
  Dis3l2_C_term    1 GpleekavVvnVldssfDVlileyGlekRVyldklplkefefdk.tkvLtLyWkkdvpeaevvqeeekfssv 71  
                     G+l+++++V++V +s+fDVli++yG+ekRV++d++plk++ef+k ++vL+LyW+k+v+++++++e+e+ +  
     KHJ33874.1 1143 GELISEGIVICVHESAFDVLIPQYGFEKRVHCDQIPLKKAEFRKdDRVLELYWEKGVSSSTYIPEDERLKVG 1214
                     89****************************************976999******************998765 PP

>> CSD2  Cold shock domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0   0.00032       1.1       1      36 [.     468     504 ..     468     515 .. 0.87
   2 !   16.4   0.0   2.1e-06    0.0074      25      70 ..     683     729 ..     653     734 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00032
        CSD2   1 FVvpddkrlkqdifip.keklkgakdGdkVvveitey 36 
                 +V+ +d  l  difi   ++++ a +Gd+V ve+++ 
  KHJ33874.1 468 YVTTQDGLLDADIFICgSKDRNRALEGDLVAVELLDV 504
                 89999*********886888999**********9875 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 2.1e-06
        CSD2  25 dGdkVvveiteyp.dkknpeGevievLGkkgdpgveilsilakhglp 70 
                  + + v+ i+++p +  +p G+ +e LGk g+ +ve ++ l+ +++ 
  KHJ33874.1 683 ADRIFVASIKRWPiTSLHPFGTLVEQLGKMGEIKVETEALLRDNNFA 729
                 36677999*****76667*************************9985 PP

>> Rrp44_CSD1  Rrp44-like cold shock domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   5.9e-05      0.21      16      74 ..     446     506 ..     432     519 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.9e-05
                 HHHTTSEEEEEEEEESSBTTEEEEE-S..SSSS-EEEESHHHHTS--TT-EEEEEE--GGG CS
  Rrp44_CSD1  16 glkngvlyqgniqiseynflegsvslp..rfskpvlivgqknlnrafngdqvivellpqse 74 
                  l +g l  g +++ + n  +  v+     +   ++i g k+ nra++gd v vell   e
  KHJ33874.1 446 LLGDGQLVSGILRVNKKNRSDAYVTTQdgLLDADIFICGSKDRNRALEGDLVAVELLDVDE 506
                 566677777777777777777777654114677899********************98766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1166  (0.0650343); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.92u 0.28s 00:00:01.20 Elapsed: 00:00:00.50
# Mc/sec: 8505.72
//
Query:       KHJ33875.1  [L=295]
Description: putative short chain dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.5e-27   95.2   0.0    4.3e-27   94.9   0.0    1.1  1  adh_short     short chain dehydrogenase
    9.7e-21   74.4   0.0    1.2e-20   74.1   0.0    1.1  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
    0.00045   20.2   0.2     0.0014   18.6   0.2    1.7  1  KR            KR domain
  ------ inclusion threshold ------
       0.16   11.8   0.1       0.31   10.8   0.1    1.5  1  DFP           DNA / pantothenate metabolism flavoprotein


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.9   0.0   9.5e-31   4.3e-27      13     192 ..       2     195 ..       1     198 [. 0.92

  Alignments for each domain:
  == domain 1  score: 94.9 bits;  conditional E-value: 9.5e-31
                 HHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT....TSEEEEEE-TTTSHHHHHHHHHHHHHHH..SSESEEEE---SS--SSGGGCSHHHHHHHH CS
   adh_short  13 GraiakelakeGakvvvvdrseekleevakelkee....gakalaiqvDvtdreevealvekavkkl..gkldvLvnNAGitgsgpfselseeewervi 105
                 G+ +ak+lak+Ga++++v+r+ ekle++++++k       +++ ++ +Dv+ +  + ++v++a      + ld++   AG +++g f ++  +e++  +
  KHJ33875.1   2 GLSVAKQLAKKGANLFIVARNVEKLERAIEQIKIVaisnTQNFQYFCADVSRAGVALEVVKEAYRWNndQLLDIVWCIAGSAHPGFFIDVPIQEMRYQM 100
                 999*****************************9777776778*********99999999999965446788**************************** PP

                 HHHTHHHHHHHHHHHHHHH......HCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGT..EEEEEEEESSBSSHHHHHHCT CS
   adh_short 106 evNltgvflltravlpaml......kqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptg..irvnavaPGlvdTdmakelre 192
                 ++N+ + +++++a+lp++l      k++  + +++sSv+++ pv g+a+Y+ sKaa+++l+++la+el  +   ++v++v PG ++++   +++e
  KHJ33875.1 101 DINFWSCVEMAQAILPQWLstaaieKKKTRHLIFTSSVVAFFPVVGYASYAPSKAAIKSLSDTLAQELILYTdeVKVHTVFPGTIQSPGLDRENE 195
                 *****************99999998899999************************************9776666************887666655 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.1   0.0   2.6e-24   1.2e-20       6     199 ..       1     211 [.       1     222 [. 0.84

  Alignments for each domain:
  == domain 1  score: 74.1 bits;  conditional E-value: 2.6e-24
                   HHHHHHHHHHHTT-EEEEEESSGGH.HHHHHHHHHHTT..SE.E..EE--TTSHHHHHHHHHHHHHHH..SSEEEEEE-----EGCSS-GGGH-HHH CS
  adh_short_C2   6 IGraiAkalaeeGaevvltdlneea.kkrveelaeelg..ae.v..lecDVtdeeqvealveevvekf..gklDilvnnagiapklkgpfletsree 94 
                   +G  +Ak+la++Ga++ ++ +n e+ ++++e+++      ++ +  + +DV++     ++v+e+ +    + lDi+   ag a++  g f++++ +e
    KHJ33875.1   1 MGLSVAKQLAKKGANLFIVARNVEKlERAIEQIKIVAIsnTQnFqyFCADVSRAGVALEVVKEAYRWNndQLLDIVWCIAGSAHP--GFFIDVPIQE 95 
                   6899********************9888888876533212224466*****************9988777889************..********** PP

                   HHHHHHHHTHHHHHHHHHHHH......HCTSC..CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGG..GTEEEEEEEE--BHCTGGGG CS
  adh_short_C2  95 fdraldvnlyslfllakaalp......lmkeg..gsivnlssvgaervvpnynaygaaKaalealtrylAvelgp..kgiRvNavspgpikTlaasg 181
                   ++  +d+n+ s++ +a+a+lp      +++++    ++ +ssv a   v +y+ y+ +Kaa+++l+ +lA el    ++++v++v pg i+ +  ++
    KHJ33875.1  96 MRYQMDINFWSCVEMAQAILPqwlstaAIEKKktRHLIFTSSVVAFFPVVGYASYAPSKAAIKSLSDTLAQELILytDEVKVHTVFPGTIQSPGLDR 192
                   *********************986554333336799************************************875449*************998555 PP

                   STT.HHHHHHHHHHHSTTS CS
  adh_short_C2 182 ikg.fdelleelearaplg 199
                    ++ ++++ + le++ p++
    KHJ33875.1 193 ENEsKPKITHILEESDPIQ 211
                   4442667777777777765 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.2   3.1e-07    0.0014      12     162 ..       1     163 [.       1     169 [. 0.75

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 3.1e-07
                 HHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT.T-EEEE----TT-HHHHHHHHHHHHHHS.S---EEE.E---------TTT--HHHHHH CS
          KR  12 LGlelarwlaekgarhlvllsRsaaadedskaliaeleal.gaevevvaaDvsdkdavealleeikaee.ppikGvi.haAgvlrdklleemtaedleq 107
                 +Gl++a++la+kga +l +++R+ ++ e++ ++i+ ++ +   + +++ aDvs +    ++++e+ + + +++  ++   Ag ++ + + ++  ++++ 
  KHJ33875.1   1 MGLSVAKQLAKKGA-NLFIVARNVEKLERAIEQIKIVAISnTQNFQYFCADVSRAGVALEVVKEAYRWNnDQLLDIVwCIAGSAHPGFFIDVPIQEMRY 98 
                 699**********8.689999**999999999999887762559***********99999998888766666555551568888877777766666666 PP

                 HHTTTTHHHHHHHHHTTT..........S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHH CS
          KR 108 vlapKvkGawnLhelled..........esldffvlfSSiagllgsagqanYaaaNaflDalaey 162
                  +   +  +  + +++ +          ++  +++++SS+ +++   g a+Ya   a + +l ++
  KHJ33875.1  99 QMDINFWSCVEMAQAILPqwlstaaiekKKTRHLIFTSSVVAFFPVVGYASYAPSKAAIKSLSDT 163
                 66555555554444433333333444449************************999888777665 PP

>> DFP  DNA / pantothenate metabolism flavoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   6.9e-05      0.31      31      76 ..       1      48 [.       1      61 [. 0.83

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 6.9e-05
                HHHHHHHHHHHTT-EEEEEE-S-.SS--.-TT-EEEE--SHHHHHHHH CS
         DFP 31 mGyalAeaaaarGaeVtlvsgpv.slet.pegvevvkvesaeemleav 76
                mG+++A+++a++Ga+  +v+ +v +le   e++++v ++++++++  +
  KHJ33875.1  1 MGLSVAKQLAKKGANLFIVARNVeKLERaIEQIKIVAISNTQNFQYFC 48
                9*********************85787535588999999999887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       589  (0.0328518); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2165.89
//
Query:       KHJ33876.1  [L=595]
Description: putative gle1-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-43  149.1   0.0    1.7e-43  148.6   0.0    1.2  1  GLE1           GLE1-like protein
  ------ inclusion threshold ------
      0.039   13.2   0.1      0.098   11.9   0.1    1.6  2  Radical_SAM_N  Radical SAM N-terminal


Domain annotation for each model (and alignments):
>> GLE1  GLE1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.6   0.0   1.9e-47   1.7e-43       2     249 ..     283     560 ..     282     562 .. 0.90

  Alignments for each domain:
  == domain 1  score: 148.6 bits;  conditional E-value: 1.9e-47
        GLE1   2 kikqikknlleqvke...dkelkkllgdlkrkInpkvgQltnss...eqlkkitkelkellesgkpvkvadk................p.......... 68 
                 ++k+++k++ +qv e     +++ ++++ +r+I++ +gQl  +s   + + k++++l + l ++k+ +++d+                +          
  KHJ33876.1 283 NMKNLRKSIESQVDEfgkPTSFRISCKKGRREITKVLGQLIVDSrntAIVDKVIRQLIDSL-QDKS-EIVDAslftlknrraistaylNedgadmnsdk 379
                 6889999999999999988899******************998877677788899999999.5555.56777688888776666655505566666677 PP

        GLE1  69 .elaykyllnflAkalvsqaetevsakpeaAfplArvavgllseh......pelgdlllArlvkkCpylvpfypakkegqsteeyrkrlGykrsddgkl 160
                  ++a++yl+  ++ka+  q  +e++ kp+aA p++ +a++++s+        +l+d+l+ ++ k Cp l+++     +++st e+r r+G+++  +gk+
  KHJ33876.1 380 lPSAFIYLIGAFCKAICAQLVNEAALKPQAASPIGILAARIFSDPrfhwrgDSLIDILISKMFKICPILFGV----CGDESTHEGRVRIGWRK-MNGKF 473
                 7778***************************************94479************************....77**************8.89*** PP

        GLE1 161 etedkyleRmsGiirlYaaiiqtelsksskenphppgleiaWrwlarilnlpleplsnitatllaafLevagnrllkaYgkqfqKllel 249
                 ++++ + +RmsG++++Yaai+++++s+++ +np+pp+ +  W  l+ i+n+p++++  +++++l++++e + +r++k+Yg+ +++ l+ 
  KHJ33876.1 474 ISDQAHFDRMSGVAAGYAAISLRDFSRTRWKNPYPPTNY--WLTLSAIVNTPSKEVCSTQYVVLKSLIEHSFSRFIKFYGDMAIAALQA 560
                 ***************************************..****************************************99999875 PP

>> Radical_SAM_N  Radical SAM N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   1.1e-05     0.098     174     265 ..      21     115 ..       8     122 .. 0.82
   2 ?   -3.5   0.0      0.51   4.6e+03     263     295 ..     169     201 ..     166     203 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 1.1e-05
  Radical_SAM_N 174 veiakrlakgeeveelkdirgtavllkk.eakakekevielpsyeevkedkklyaeafrlleeetnplnakalvqkhgdr..avvlnppalplst 265
                      i+++l+++ ++++ +d++++ + + + e+++ ++++i+l + e+v+ d++++ +++r  ee+ +  ++ka+  k++++   +v  pp++p s 
     KHJ33876.1  21 SSIVHELSTSFTFRNSEDLHNILLSAAQiEHNKVRESAINLFELERVRYDQEAFRNKIREDEERVRLEKEKAIEAKKNQEslEIVKRPPTPPPSA 115
                    5688999999999999999999997776444555589**************************99999999998877665478999999988665 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 0.51
  Radical_SAM_N 263 lsteelDevyelpyarkahpsykkkkipalemi 295
                     +++ +D + + p++ k+  s++++ i al ++
     KHJ33876.1 169 FESSSIDMLNSSPFSTKTTSSFSHQPITALPKV 201
                    567889999999**********99999998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (595 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       834  (0.0465168); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 4401.30
//
Query:       KHJ33877.1  [L=354]
Description: putative homoserine kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-12   45.9   0.2    9.8e-12   44.9   0.2    1.6  1  GHMP_kinases_N  GHMP kinases N terminal domain
      0.001   19.4   0.0      0.012   16.0   0.0    2.3  2  GHMP_kinases_C  GHMP kinases C terminal


Domain annotation for each model (and alignments):
>> GHMP_kinases_N  GHMP kinases N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.9   0.2   1.1e-15   9.8e-12       1      66 []      89     150 ..      89     150 .. 0.84

  Alignments for each domain:
  == domain 1  score: 44.9 bits;  conditional E-value: 1.1e-15
                     EEEEEESSHTTSSSCHHHHHHHHHHHHHHHHTTEHHHH...HHHHHHHHHHHHHHHHHSHHHHHHHHSS CS
  GHMP_kinases_N   1 divikseiPvgaGLGSSAAlavalvaAllallglslee...aklaleaerlaqggngsggDvaasvyGg 66 
                     +++ik+ iP+g+GLGSS+A++va+va  ++   l l++   ++ +l +er       ++++vaa++yGg
      KHJ33877.1  89 RVHIKNPIPLGRGLGSSGAAVVAGVALGNEVGKLGLSKarmLDYCLMIER-------HPDNVAAALYGG 150
                     689*****************************777743334555555555.......9**********8 PP

>> GHMP_kinases_C  GHMP kinases C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.0     0.039   3.5e+02      64      81 ..     249     266 ..     248     270 .. 0.88
   2 !   16.0   0.0   1.3e-06     0.012      23      77 ..     267     320 ..     260     326 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.039
  GHMP_kinases_C  64 alfkdkdeaeqvaralre 81 
                     al++++++aeq+++a++ 
      KHJ33877.1 249 ALGRSPPDAEQIYLAMQD 266
                     78999**********975 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 1.3e-06
  GHMP_kinases_C  23 s..elkavvgilppeleellealselG...algaklsGaGgGptvfalfkdkdeaeqvar 77 
                        ++  ++ +l p l ++l+ +        +g +lsGa  Gpt+ al+   d+ e +a+
      KHJ33877.1 267 RihQP--YRMELIPGLPQILQDMTPKSfpgLCGICLSGA--GPTILALA--TDNFESIAD 320
                     45678..99999999999999996666668*********..*******9..554455555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       244  (0.0136092); expected 358.6 (0.02)
Passed bias filter:                      231  (0.0128842); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.20s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 2909.87
//
Query:       KHJ33878.1  [L=128]
Description: putative histone H3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-40  139.0   1.5    1.3e-40  138.8   1.5    1.1  1  Histone        Core histone H2A/H2B/H3/H4
    9.6e-05   22.5   0.0    0.00016   21.7   0.0    1.5  1  CENP-T_C       Centromere kinetochore component CENP-T histon
    0.00011   22.5   0.0    0.00016   22.0   0.0    1.3  1  CENP-S         CENP-S protein
  ------ inclusion threshold ------
      0.016   15.5   0.1      0.024   14.9   0.1    1.4  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
       0.14   12.3   0.0       0.24   11.5   0.0    1.3  1  TFIID-31kDa    Transcription initiation factor IID, 31kD subu


Domain annotation for each model (and alignments):
>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.8   1.5   3.6e-44   1.3e-40      23     131 .]       8     121 ..       1     121 [. 0.87

  Alignments for each domain:
  == domain 1  score: 138.8 bits;  conditional E-value: 3.6e-44
                 XXXHT.TS-SSS.SB--TTT-XTTHHHHHHHHHHHHXXSXXSXHHHHHHHHHHHH....TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTX CS
     Histone  23 akker.kassks.kkkkkrryrpgtvalkeirkyqkstdlliqklpfaRvvreivk...sekedlrisaeavlalqealEallvelfeeAnllakhaKR 116
                 ak+e+  ++ ++    kkrryrpgt alkeirkyq+std l  klpfaR+vre+       +e+ r++++a++alqe +Ea+lv+lfe++nl+a+haKR
  KHJ33878.1   8 AKSEAsIQPGDPlPREKKRRYRPGTLALKEIRKYQRSTDMLLLKLPFARLVREVALqvrPAEEGWRWQSQAIQALQESAEAFLVHLFEDTNLCAIHAKR 106
                 3334443333440346889*********************************99988899*************************************** PP

                 SEEXHHHHHHHHHHT CS
     Histone 117 vTitpkDiqlArrlr 131
                 vTi++kDiqlArr+r
  KHJ33878.1 107 VTIMQKDIQLARRIR 121
                 *************97 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   4.6e-08   0.00016      12      78 ..      57     121 ..      39     125 .. 0.82

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 4.6e-08
    CENP-T_C  12 vvkklakrfakasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkrqr 78 
                 +v+ +a ++ +   +  + + +a++al+++ + f+  + eD +  a Ha+R ti ++D+  L +r r
  KHJ33878.1  57 LVREVALQV-RPAEEGWRWQSQAIQALQESAEAFLVHLFEDTNLCAIHAKRVTIMQKDIQ-LARRIR 121
                 566677666.332466788999************************************85.566655 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   4.6e-08   0.00016      19      71 ..      67     119 ..      49     122 .. 0.85

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 4.6e-08
      CENP-S  19 aaekeveatkqfiaaltelvykqlenlakDLeaFakHAkRstittdDvlLlaR 71 
                  ae++ +  +q+i+al e   + l +l +D ++ a HAkR ti ++D+ L  R
  KHJ33878.1  67 PAEEGWRWQSQAIQALQESAEAFLVHLFEDTNLCAIHAKRVTIMQKDIQLARR 119
                 4577888899**************************************99766 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.1   6.7e-06     0.024      23      64 ..      76     117 ..      51     117 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 6.7e-06
                    HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF  23 kdAkeliaecveefieelaseAaeickkekrKtikaehiklA 64 
                    ++A + ++e++e f+ +l + ++  + ++kr ti++++i+lA
     KHJ33878.1  76 SQAIQALQESAEAFLVHLFEDTNLCAIHAKRVTIMQKDIQLA 117
                    678899*********************************998 PP

>> TFIID-31kDa  Transcription initiation factor IID, 31kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   6.8e-05      0.24      24      66 ..      75     117 ..      72     123 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 6.8e-05
  TFIID-31kDa  24 eerVvlqLldfayrytssvLedAkvlaehakkkevslddvrlA 66 
                  +++ ++ L + a  + ++++ed +++a hak+ ++  +d++lA
   KHJ33878.1  75 QSQAIQALQESAEAFLVHLFEDTNLCAIHAKRVTIMQKDIQLA 117
                  6788999***********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1015.39
//
Query:       KHJ33879.1  [L=329]
Description: putative member of ferritin superfamily [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-38  130.1   1.5    8.5e-38  129.6   1.5    1.2  1  Ferritin_2  Ferritin-like domain


Domain annotation for each model (and alignments):
>> Ferritin_2  Ferritin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.6   1.5   4.8e-42   8.5e-38       1     134 [.      62     196 ..      62     198 .. 0.98

  Alignments for each domain:
  == domain 1  score: 129.6 bits;  conditional E-value: 4.8e-42
  Ferritin_2   1 sdvdiLnfAlnlEyleaafYtaalegasldd..kalldaevrevaeeiakheeaHveflkaale..GaaavakptfdfafdpfadeksflalaavlEdv 95 
                 +d+d+L+fAl+lE le+ fY+++++++  +d  + +l++ + + +++i+  e++Hv++l+aal+  Gaa+v++++++f   ++++  +++a+a vlE++
  KHJ33879.1  62 GDLDVLEFALTLENLETSFYQQGFAKFPDSDfaALGLQPIEIANLKSIGGTEATHVTTLTAALAgaGAAPVQPCQYNF---NLTTASAMVATAGVLENI 157
                 69************************9999999999******************************************...****************** PP

  Ferritin_2  96 gvsAYlgaapllsnkelltaaasIlsvEArHaavirtll 134
                 gvsAYl aapl++++++lt+aa+I++vEArH+++irt+ 
  KHJ33879.1 158 GVSAYLAAAPLVKSPDVLTVAAEIVTVEARHQTFIRTAS 196
                 ************************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      273  (0.0152267); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 2427.85
//
Query:       KHJ33880.1  [L=738]
Description: putative nadh-ubiquinone oxidoreductase 78 kda mitochondrial precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.1e-67  226.2   0.1    9.2e-65  219.3   0.1    2.2  1  Molybdopterin    Molybdopterin oxidoreductase
    1.8e-17   62.6   0.2    1.8e-17   62.6   0.2    1.9  2  NADH-G_4Fe-4S_3  NADH-ubiquinone oxidoreductase-G iron-sulfur
    6.2e-17   61.4   0.4      2e-16   59.8   0.4    1.9  1  Fer2_4           2Fe-2S iron-sulfur cluster binding domain
    1.5e-16   60.8   0.0    3.6e-16   59.6   0.0    1.7  1  NADH_dhqG_C      NADH-ubiquinone oxidoreductase subunit G, C-
    4.9e-05   23.2   0.3    4.9e-05   23.2   0.3    2.0  2  Fer2             2Fe-2S iron-sulfur cluster binding domain
  ------ inclusion threshold ------
      0.075   12.8   0.0        4.6    7.0   0.0    2.5  2  TPP_enzyme_M     Thiamine pyrophosphate enzyme, central domai


Domain annotation for each model (and alignments):
>> Molybdopterin  Molybdopterin oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.3   0.1   3.1e-68   9.2e-65       1     430 [.     301     625 ..     301     627 .. 0.96

  Alignments for each domain:
  == domain 1  score: 219.3 bits;  conditional E-value: 3.1e-68
                    B--S-EEECTTTTTSEEEE--HHHHHHHHHHHHHHHHHHCSGGGEEE.EEBTSSCSHHHHHHHHHHHHHTT-EEE-BEECCGGGTTHHHHCHHCCC CS
  Molybdopterin   1 RlkyPmvRkqargeGkFvrvsWdeAleliaaslkytikkygpdrvag.fssgplmsmeslaslkkllsllggknlsfydwyadlppasaqqtigsd 95 
                    Rl++P++R  +   GkF +++W+eAl++i + +k +  k ++    + +++g+l++ es+++lk+ll++l ++n+++ ++++d p a+     g d
     KHJ33880.1 301 RLTTPLIR--K--IGKFFPATWEEALTEIGNTYKDLNLKPNE----FkAIAGQLIDIESMVALKDLLNKLDSENMALDQPFGDQPIAH-----GID 383
                    9*******..4..6*********************9999999....88*************************************998.....9** PP

                    CCTTTS-SS-CCGGGG-SEEEEESS-HHHHSHHHHHHHHHHHHTTC-EEEEECSSB-HCGGGCSEEEEEHTTTHHHHHHHHHHHHHHCCCCTCHHH CS
  Molybdopterin  96 srsnyessnpledlensdliilwGsNvreerpilnarirkaalkkkakvivigpryaellkfadewlaikpgtdaalalamghvilqelkvdkefl 191
                     rsny ++++++++e++d+i+++G N r+e+  lnarirk +++++++++v+g +++  ++f+ e+l+++++ +++    ++ ++ ++l  ++   
     KHJ33880.1 384 IRSNYMFNSTIVGVEEADVILIVGCNTRHEAAGLNARIRKHWMRSDLEIGVVGKTWD--STFEFEDLGNDAAALKKA---ISGPFGKKLASAN--- 471
                    *********************************************************..99**********999998...9999*********... PP

                    HHHEECHHHCCCCCCCEECCSHHHHHHCCHHHHHHHHHHHHHHTSSEEEEECHHHHTSTTHHHHHHHHHHHHHHCTHCSSTTCEEEEESSCTTHHH CS
  Molybdopterin 192 rkytygkeetdmpllvtleeetgkkkevvariarelarnaaktagksmiivGaglnhrqdgdaiyravinLallvgnvgqpgGgwahlnGqlilag 287
                                                                 k+miivG g++++ d + +y+++ +++    +     ++w+++n   +l++
     KHJ33880.1 472 ---------------------------------------------KPMIIVGSGVTDHVDAKYLYETIGSFVSKNAAKFL-TNDWNGYN---VLQR 518
                    .............................................9**************************98665555.89******...**** PP

                    CHHHHTCCTTCCCCCCCTTHHHHHCCCTTTCSTSS--ECGGCHHHHHHTTSSSEEEEESH.HHHHSTTSCCCHCHHHCSSEEEEEESCS.SHHHHT CS
  Molybdopterin 288 aaekvgalpvllsvkslkeekikfaaeqpgnlgnfprnlfversnllkssgkkvlyllgnnpevdhadenevekalekldlvvvldgrl.tstaly 382
                     a+++ga+                      ++g++ + + v       ++++k+++llg       ad      ++ ++d++v+++g++ +++a++
     KHJ33880.1 519 SASRTGAY----------------------EIGFTVPSTYV------AKTKPKIIWLLG-------ADDFAS--EDIPADAFVIYQGHHgDRGAQI 577
                    ********......................****9999999......57899*******.......888888..6779****************** PP

                    SSEEEEBE-CCGSEEEEE-TTSEEEEEEESSS-STT-BEHHHHHHHHH CS
  Molybdopterin 383 aDiiLPaatwyEkedlytndegrfqhlkqavsppgeaksdwkIlkaLa 430
                    aD+iLP+a+++Ek+ +y+n+egr q +++a+s pg a+ dwkI++a +
     KHJ33880.1 578 ADVILPGAAYTEKSATYINTEGRAQMTRAATSLPGAARIDWKIIRAAS 625
                    *********************************************966 PP

>> NADH-G_4Fe-4S_3  NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.6   0.2     6e-21   1.8e-17       1      38 [.     111     148 ..     111     150 .. 0.95
   2 ?   -4.9   1.8         6   1.8e+04      11      20 ..     174     183 ..     173     184 .. 0.70

  Alignments for each domain:
  == domain 1  score: 62.6 bits;  conditional E-value: 6e-21
  NADH-G_4Fe-4S_3   1 RktilellLanHpldCltCdknGnCeLQdlayelgvee 38 
                      R +++e+lLanHpldC++Cd++G+C+LQd ++++g ++
       KHJ33880.1 111 REGVMEFLLANHPLDCPVCDQGGECDLQDQSMRYGADR 148
                      899********************************986 PP

  == domain 2  score: -4.9 bits;  conditional E-value: 6
  NADH-G_4Fe-4S_3  11 nHpldCltCd 20 
                      n +  C+ C 
       KHJ33880.1 174 NRCIHCTRCI 183
                      6677888886 PP

>> Fer2_4  2Fe-2S iron-sulfur cluster binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.8   0.4   6.7e-20     2e-16       2      81 ..      33     104 ..      32     105 .. 0.93

  Alignments for each domain:
  == domain 1  score: 59.8 bits;  conditional E-value: 6.7e-20
      Fer2_4   2 rpvtltfDGkevtvpeGdtvasAllangvdvprsckygrprgelcaggeCrnClVevegepn.vracstpvedGlkvetqt 81 
                 ++++lt+DGk+v+v++G+ +++A+ ++gv++pr              g+Cr ClVeve+ p+ v++c  pv++G++v+t++
  KHJ33880.1  33 AEIQLTIDGKQVSVEAGSALIQACEKAGVTIPRKLMI---------AGNCRMCLVEVEKAPKpVASCAWPVQPGMVVKTNS 104
                 689*****************************86665.........79***********99978***************87 PP

>> NADH_dhqG_C  NADH-ubiquinone oxidoreductase subunit G, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.6   0.0   1.2e-19   3.6e-16       2      51 .]     657     707 ..     656     707 .. 0.92

  Alignments for each domain:
  == domain 1  score: 59.6 bits;  conditional E-value: 1.2e-19
  NADH_dhqG_C   2 vepasf...gkaalvaakagasgklsgaplkspiedFYmTDpISRASaTMAkC 51 
                  vep  +   +k +lv++++g+   ++g++l+++iedFY+TD+ISR+S+TMA+C
   KHJ33880.1 657 VEPVALkelSKIQLVDQNKGS--RAKGKALANVIEDFYFTDVISRSSPTMARC 707
                  67776677799**********..799*************************** PP

>> Fer2  2Fe-2S iron-sulfur cluster binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.3   1.6e-08   4.9e-05       2      77 ..      38      94 ..      37      95 .. 0.79
   2 ?   -1.1   0.2      0.63   1.9e+03      19      40 ..     114     135 ..     106     137 .. 0.84

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 1.6e-08
                ETTTEEEEEEEETTTHBHHHHHHHTTTTTSTTSSSS...SS.SSTTEEEEEESCECTTSSSSTHHHHHTTEEEEGGGSEE CS
        Fer2  2 tidgkevevevadgettlldaaeenggidipysCgg...gg.CgtClvevlegevqsdetelegeeldegklrlaCqtiv 77
                tidgk+v+ve+   ++ l +a+e++ g+ ip        +g C++Clvev+            +++    k +++C+ +v
  KHJ33880.1 38 TIDGKQVSVEA---GSALIQACEKA-GVTIPR---KlmiAGnCRMCLVEVE------------KAP----KPVASCAWPV 94
                89***999999...888******99.*****5...4455555******977............565....3678887766 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.63
                 HHHHHHHTTTTTSTTSSSSSS.S CS
        Fer2  19 lldaaeenggidipysCgggg.C 40 
                 +++++  n+ +d p  C +gg C
  KHJ33880.1 114 VMEFLLANHPLDCP-VCDQGGeC 135
                 78999999999999.9***9999 PP

>> TPP_enzyme_M  Thiamine pyrophosphate enzyme, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.027        82      75      89 ..     397     411 ..     389     432 .. 0.81
   2 ?    7.0   0.0    0.0015       4.6       7      25 ..     466     484 ..     464     505 .. 0.85

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.027
                   HHH-SEEEEES-SSS CS
  TPP_enzyme_M  75 leeaDlvlalGarfd 89 
                   +eeaD++l++G++  
    KHJ33880.1 397 VEEADVILIVGCNTR 411
                   79*********8864 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0015
                   HHHH-SSEEEEE-CHHCHT CS
  TPP_enzyme_M   7 llkaakrpvilvGggvars 25 
                    l++a +p+i+vG+gv ++
    KHJ33880.1 466 KLASANKPMIIVGSGVTDH 484
                   689*************854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (738 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 5453.58
//
Query:       KHJ33881.1  [L=213]
Description: putative er lumen protein retaining receptor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.5e-53  179.5   4.5      1e-52  178.9   4.5    1.3  1  ER_lumen_recept  ER lumen protein retaining receptor
  ------ inclusion threshold ------
       0.05   13.4  12.7        3.1    7.6   0.2    4.1  5  PQ-loop          PQ loop repeat
      0.077   12.7   0.1       0.14   11.8   0.1    1.4  1  COX7B            Cytochrome C oxidase chain VIIB


Domain annotation for each model (and alignments):
>> ER_lumen_recept  ER lumen protein retaining receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.9   4.5   1.7e-56     1e-52       1     147 []      28     170 ..      28     170 .. 0.96

  Alignments for each domain:
  == domain 1  score: 178.9 bits;  conditional E-value: 1.7e-56
  ER_lumen_recept   1 svaGlSlktqilyalvfltryldlflylreeislyntlmkialillsiyiiylilvkfketyekekDtfklellivpslllallfhpgssktll 94 
                      s++G+S+k+q ly++v++tryldlf++l    +lyntl+k++++ +s+y+iy+++  +k t++ + Dtf++++l+ ++++la++  +  ++t l
       KHJ33881.1  28 SCSGISFKSQALYLIVYATRYLDLFWTLG--DNLYNTLFKLLFLGSSSYTIYIMTNAYKPTHDPNVDTFRIQYLLGGAFVLAIIWPY--KYTPL 117
                      8***********************96664..79*************************************************76666..***** PP

  ER_lumen_recept  95 evlwtfsiiLesvAilPQlillqktgevesltshyvfalglyRalyllnWivr 147
                      e+lw+fsi+LesvAilPQl+llq+tge+e++t hy++alg+yRaly++nW+vr
       KHJ33881.1 118 EILWAFSIWLESVAILPQLFLLQRTGEAETITIHYLAALGAYRALYIPNWVVR 170
                      **************************************************986 PP

>> PQ-loop  PQ loop repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       0.6   3.6e+03      42      54 ..       6      18 ..       3      19 .. 0.77
   2 ?    7.6   0.2   0.00052       3.1      21      55 ..      20      54 ..      20      60 .. 0.85
   3 ?    5.3   0.1    0.0027        16      39      59 ..      65      85 ..      62      87 .. 0.85
   4 ?    7.6   0.0   0.00054       3.2       3      38 ..     118     153 ..     117     157 .. 0.89
   5 ?   -3.0   0.2       1.1   6.4e+03       4      11 ..     183     190 ..     178     198 .. 0.48

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.6
     PQ-loop 42 llGdilsllylil 54
                +lGd+  ll++++
  KHJ33881.1  6 ILGDFSHLLSILI 18
                7899999998875 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00052
     PQ-loop 21 iikNykrkSteGlSilflllwllGdilsllyliln 55
                i k + + S++G+S+ +  l l+ + ++ l l+++
  KHJ33881.1 20 IRKMHATNSCSGISFKSQALYLIVYATRYLDLFWT 54
                56778899***************999998877776 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.0027
     PQ-loop 39 llwllGdilsllylilngfpp 59
                 l +lG++ +++y+++n + p
  KHJ33881.1 65 KLLFLGSSSYTIYIMTNAYKP 85
                5889************99876 PP

  == domain 4  score: 7.6 bits;  conditional E-value: 0.00054
     PQ-loop   3 eilgyislvlwlvsyiPQiikNykrkSteGlSilfl 38 
                 eil  +s+ l++v+ +PQ+ +  ++  +e + i +l
  KHJ33881.1 118 EILWAFSIWLESVAILPQLFLLQRTGEAETITIHYL 153
                 689999*******************99999988776 PP

  == domain 5  score: -3.0 bits;  conditional E-value: 1.1
     PQ-loop   4 ilgyislv 11 
                 i g++ ++
  KHJ33881.1 183 IAGLLQTL 190
                 33333333 PP

>> COX7B  Cytochrome C oxidase chain VIIB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   2.4e-05      0.14      35      67 ..      92     124 ..      69     128 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.4e-05
       COX7B  35 dkyGnavlisGavfcvavwvyvltqigieWnls 67 
                 d +    l++Ga + + +w y  t + i W +s
  KHJ33881.1  92 DTFRIQYLLGGAFVLAIIWPYKYTPLEILWAFS 124
                 66777789**********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       298  (0.0166211); expected 358.6 (0.02)
Passed bias filter:                      164  (0.00914719); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1676.38
//
Query:       KHJ33882.1  [L=165]
Description: hypothetical protein EV44_g0481 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1266.74
//
Query:       KHJ33883.1  [L=354]
Description: putative zinc metalloproteinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      4e-51  173.8   0.0    5.7e-51  173.3   0.0    1.2  1  WLM        WLM domain
    0.00075   19.6   0.1     0.0018   18.4   0.1    1.5  1  DUF45      Protein of unknown function DUF45
      0.006   16.4   0.1      0.017   15.0   0.0    1.8  2  SprT-like  SprT-like family


Domain annotation for each model (and alignments):
>> WLM  WLM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.3   0.0   9.5e-55   5.7e-51       6     191 .]     147     337 ..     139     337 .. 0.91

  Alignments for each domain:
  == domain 1  score: 173.3 bits;  conditional E-value: 9.5e-55
         WLM   6 ikvlkkkpekeaalellkriakd..vqpimkkhkfkVglLtElaPkean.........lLGlNvnkGekieLrLRtdkddkeflpyesimgtllHELaH 93 
                 ++ l + p+++++l+ll+r+ +d  ++++m+khkf+V lLtE++P+ ++         +LGlN+n+Ge ieLrLRtd++ +++++y++i++tl+HEL+H
  KHJ33883.1 147 LQPLSNLPNPSRSLRLLQRLKDDagIKAVMRKHKFTVPLLTEMDPTIHTqlnhegtfrTLGLNRNQGEIIELRLRTDAY-DGYRDYKTIRKTLCHELTH 244
                 4556699***************************************9999*****************************.9****************** PP

         WLM  94 nvygpHdakFyallkeLekeveelkakGlkegflkeGkrlggkevrnksaeeeeekealekagiagkgarlGgrse.....ektrskasareliaaAae 187
                 nvygpH+++F++l+k++ekeve+ ++       ++ G+++gg+e ++     +e +++ + ++++g++  lG + +     ++++ + s+re++a+Aae
  KHJ33883.1 245 NVYGPHNQDFWDLCKKIEKEVEASDW-------RSGGNVVGGRETYDP---SREVNANDDCERWTGGEFILGEDPSkkkspSISDGDSSRREIMAKAAE 333
                 **************************.......6************87...566667778899*********7665333445559999*********** PP

         WLM 188 rRla 191
                 +R++
  KHJ33883.1 334 ERMK 337
                 **96 PP

>> DUF45  Protein of unknown function DUF45
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.1   2.9e-07    0.0018     170     193 ..     238     261 ..     232     269 .. 0.89

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 2.9e-07
       DUF45 170 vvHElaHlleknHskrFwalvekl 193
                 ++HEl+H ++  H+++Fw+l++k+
  KHJ33883.1 238 LCHELTHNVYGPHNQDFWDLCKKI 261
                 79*******************987 PP

>> SprT-like  SprT-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.92   5.5e+03      45      68 ..      35      56 ..      31      57 .. 0.80
   2 !   15.0   0.0   2.8e-06     0.017      28     104 ..     165     266 ..     132     286 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.92
   SprT-like 45 hhasIeLseklldsrsedrllntL 68
                h+ s+ L++++ld   ++++l++L
  KHJ33883.1 35 HNFSLPLNATILDL--STEILEVL 56
                66788899999999..88888876 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 2.8e-06
   SprT-like  28 rlnttaGranlkr................................atvrhhasIeLsekllds.rsedrllntLaHElcHlalfvisgvrnnpHGaeFk 93 
                 rl+  aG   + r                                +++++  +++L +  +d  r+ + +++tL+HEl H +     g    pH+++F 
  KHJ33883.1 165 RLKDDAGIKAVMRkhkftvplltemdptihtqlnhegtfrtlglnRNQGEIIELRLRTDAYDGyRDYKTIRKTLCHELTHNVY----G----PHNQDFW 255
                 5555666555555566666666666666666666666666666555667777888888888875678999**********875....6....999***9 PP

   SprT-like  94 awaakvekala 104
                  +++k+ek ++
  KHJ33883.1 256 DLCKKIEKEVE 266
                 99999999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 2938.34
//
Query:       KHJ33884.1  [L=99]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.044   13.8   0.5      0.054   13.6   0.5    1.2  1  ArfGap    Putative GTPase activating protein for Arf
       0.06   13.8   0.2      0.078   13.4   0.2    1.1  1  DUF1687   Protein of unknown function (DUF1687)


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.5   6.1e-06     0.054      36      93 ..       6      62 ..       1      85 [. 0.84

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 6.1e-06
                -HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG-T CS
      ArfGap 36 CieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekrsk 93
                C +C g Hrs  +h    r +     ++++l++++++g+++ +++l ak  +e+  s 
  KHJ33884.1  6 CRNCEGPHRSD-SHRCLARPTCSGIPTKQQLKTFRQVGEREYQAVLRAKAAEESAAST 62
                **********8.89999999999999***********************977776633 PP

>> DUF1687  Protein of unknown function (DUF1687)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   8.7e-06     0.078      55     103 ..      27      74 ..      24      89 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 8.7e-06
     DUF1687  55 ekfPTlDQlktilsyvgkskaksvlksafpelseilkkfkkdeeskkkl 103
                 +++PT  Qlkt+ + vg+ ++++vl+++ +e+s +  ++ +   ++++ 
  KHJ33884.1  27 SGIPTKQQLKTFRQ-VGEREYQAVLRAKAAEESAASTEKINIDLTSSQE 74 
                 578**********9.9999999999999977666655544443333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       900  (0.050198); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 827.36
//
Query:       KHJ33885.1  [L=229]
Description: hypothetical protein EV44_g4213 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      262  (0.0146132); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 1924.21
//
Query:       KHJ33886.1  [L=464]
Description: hypothetical protein EV44_g3060 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       376  (0.0209716); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.20s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 3912.95
//
Query:       KHJ33887.1  [L=123]
Description: putative tir-nbs-lrr type disease resistance protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.22s 00:00:00.56 Elapsed: 00:00:00.34
# Mc/sec: 1067.78
//
Query:       KHJ33888.1  [L=283]
Description: putative mitogen-activated protein kinase maf1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-54  184.9   0.0    1.8e-54  184.6   0.0    1.1  1  Maf1             Maf1 regulator
  ------ inclusion threshold ------
      0.071   13.2   0.5       0.15   12.2   0.5    1.5  1  Inhibitor_Mig-6  EGFR receptor inhibitor Mig-6


Domain annotation for each model (and alignments):
>> Maf1  Maf1 regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.6   0.0     2e-58   1.8e-54       2     173 ..      24     220 ..      23     221 .. 0.92

  Alignments for each domain:
  == domain 1  score: 184.6 bits;  conditional E-value: 2e-58
        Maf1   2 egrlelYsckaagsdkklykkiekeleselessskeslsls.....aaseslssssPfgplsdkssrktlayLiatLnasfpdYDFss.lrsseFkkek 94 
                 +g+++lY++kaagsdkkly++ie++les++ s  k s+s+       + ++ls+ sPfgpls+ ssr+t+ayLia+Lnas++dYDFs+ l++++F++e+
  KHJ33888.1  24 IGGCDLYTTKAAGSDKKLYRNIECSLESQYVSLLKYSASIIppregLSPKTLSQPSPFGPLSQISSRRTFAYLIAILNASHSDYDFSEiLSPADFRRER 122
                 799***************************999888887779999999999************************************************ PP

        Maf1  95 slksvinnidstLsslveekyeelre....................klWklideeidlkdCdiYsYkpdedsdpf.keegalwsfnYFffnkklKrvlf 172
                 slksvin ids+L +l   +  ++++                     +W +i++e+ lkdC+iY++ p ++   f ++e+++ws+nYFffnk lKrv +
  KHJ33888.1 123 SLKSVINVIDSNLNALKPVSSVNIQNlsqggfsatsstsltrswgpGMWGIINKEMVLKDCTIYCWLPPDE--LFdGDERSIWSMNYFFFNKDLKRVTY 219
                 ***************5555555555566688888888888888888*********************9975..999999*******************9 PP

        Maf1 173 l 173
                 l
  KHJ33888.1 220 L 220
                 8 PP

>> Inhibitor_Mig-6  EGFR receptor inhibitor Mig-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.5   1.7e-05      0.15       5      31 ..      64      91 ..      61     104 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.7e-05
  Inhibitor_Mig-6  5 iPPRdPLsqpgsrtPsPval.sylstsp 31
                     iPPR+ Ls+++   PsP +  s++s+++
       KHJ33888.1 64 IPPREGLSPKTLSQPSPFGPlSQISSRR 91
                     9*****************9777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       303  (0.0169); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.18s 00:00:00.57 Elapsed: 00:00:00.41
# Mc/sec: 2063.87
//
Query:       KHJ33889.1  [L=158]
Description: putative ap-1 adaptor complex subunit sigma [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-47  161.2   1.3    1.6e-47  161.0   1.3    1.0  1  Clat_adaptor_s  Clathrin adaptor complex small chain


Domain annotation for each model (and alignments):
>> Clat_adaptor_s  Clathrin adaptor complex small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.0   1.3     9e-52   1.6e-47       2     139 ..       3     137 ..       2     140 .. 0.97

  Alignments for each domain:
  == domain 1  score: 161.0 bits;  conditional E-value: 9e-52
                     EEEEEEE-TTS-EEEEEESSSS-CHHHHHHHHHHHHHHHTT-SSS-SEEEETTEEEEEEEETTEEEEEEEETTS-HHHHHHHHHHHHHHHHHHCT CS
  Clat_adaptor_s   2 ikaililnkkgkvrlakfytavddkkkqklieevyelvsaRdsklsniveledlkviYkryasLYFvvivdeqeneliilelihlfvesLdkyfg 96 
                     i+++++l+++gkvrlak++t+++ k+k+k+i++v +lv+aR + ++n++e++d k++Y+ryasL+F+ +  +++neli+le++h++ve +dky+g
      KHJ33889.1   3 IHYLILLSRQGKVRLAKWFTTLSPKEKAKIIKDVSQLVLARRTRMCNFLEYRDSKIVYRRYASLFFIAGCASTDNELITLEIVHRYVEQMDKYYG 97 
                     89********************************************************************************************* PP

                     S-SHHHHHHCHHHHHHHHHCCEETTEES---HHHHHHCHHHHH CS
  Clat_adaptor_s  97 nVceldlvfnfekvylildEivsgGeiletskkevlkrvelld 139
                     nVce   +fnf+k y+ildE++ +Ge++e+skk+vl+ ++  d
      KHJ33889.1  98 NVCE---IFNFQKAYFILDELLLAGELQESSKKNVLRVISAQD 137
                     ****...8****************************9888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (158 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       655  (0.036533); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.19s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 1305.17
//
Query:       KHJ33890.1  [L=1317]
Description: hypothetical protein EV44_g1352 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       838  (0.0467399); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.75u 0.26s 00:00:01.01 Elapsed: 00:00:00.40
# Mc/sec: 9983.65
//
Query:       KHJ33891.1  [L=255]
Description: putative calcipressin family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      3e-44  151.0   0.2    5.2e-44  150.2   0.2    1.4  1  Calcipressin  Calcipressin
  ------ inclusion threshold ------
      0.072   13.4   0.8       0.12   12.7   0.8    1.3  1  DUF5438       Family of unknown function (DUF5438)


Domain annotation for each model (and alignments):
>> Calcipressin  Calcipressin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.2   0.2   5.9e-48   5.2e-44       3     185 ..      50     246 ..      48     247 .. 0.86

  Alignments for each domain:
  == domain 1  score: 150.2 bits;  conditional E-value: 5.9e-48
  Calcipressin   3 dvvdadnlellralieqtdeilawsllksFrRiivvfsseeaaaavrsqldwekeeilGkklrlYfaqpttidrdaakkhLalPeaeklFlISPPaS 99 
                   +v+ ++nl +++ali++  +i  w++lksFrRiiv f++ ++a+++r+    e e++lG+++++Yf+ pt+i  +a++ hL lP+a+klF+ISPP+S
    KHJ33891.1  50 LVFRNENLLTVKALIHNLTPIHSWAPLKSFRRIIVSFFDINSAIQIRQL--IESEAMLGERCKVYFGHPTPI--EAKEAHLNLPDAGKLFFISPPPS 142
                   68999999****************************************9..5688*****************..77889****************** PP

  Calcipressin 100 PPegweqkaedaPnrtvlaeDlqealakLel.......................eekaqlsagkdktpsvdltlvkvevgeseadeeeadevsdtpr 173
                   PP+gwe++ edaPn++v aeDl++al+ ++                           + +   ++++ s +l++++ve  +++ d++e      +++
    KHJ33891.1 143 PPHGWENRLEDAPNKQVVAEDLAKALKNIRDgnkscfpdspisdrgetgyrtrsTSCTTIYRPEEHGGSPNLPAINVE--DTTGDNCE---PIPMEH 234
                   ******************************999999999999888877776654333334444466666666555544..45566676...568899 PP

  Calcipressin 174 tkpkivkTarPp 185
                    kp++++T rPp
    KHJ33891.1 235 EKPIYAHTSRPP 246
                   99*********9 PP

>> DUF5438  Family of unknown function (DUF5438)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.8   1.3e-05      0.12       2      57 ..      32      86 ..      31      94 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.3e-05
     DUF5438  2 nvsiphsftmtlkeinrsiiysttnsvisallmynlltiisttylsvsfrrvmsGf 57
                n+  p s t+ + +i+ s+++   n +    l++nl  i s + l  sfrr++  f
  KHJ33891.1 32 NIPSPASNTLIITNIENSLVFRNENLLTVKALIHNLTPIHSWAPLK-SFRRIIVSF 86
                78889**********************9999********9999996.9***98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       314  (0.0175135); expected 358.6 (0.02)
Passed bias filter:                      289  (0.0161191); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1935.38
//
Query:       KHJ33892.1  [L=352]
Description: putative mitochondrion organization and biogenesis protein and biogenesis protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-12   46.3   0.3      5e-12   46.3   0.3    2.1  2  Neugrin   Neugrin
    1.7e-06   28.3   0.4    1.7e-06   28.3   0.4    2.0  2  MRP-L20   Mitochondrial ribosomal protein subunit L20
  ------ inclusion threshold ------
      0.073   13.4   0.1        7.9    6.9   0.0    2.3  2  Rrf2      Transcriptional regulator
        0.1   12.8   0.0       0.21   11.7   0.0    1.6  1  AbiEi_4   Transcriptional regulator, AbiEi antitoxin


Domain annotation for each model (and alignments):
>> Neugrin  Neugrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   1.6      0.14   6.1e+02      51     169 ..      44     162 ..      39     203 .. 0.60
   2 !   46.3   0.3   1.1e-15     5e-12       7      66 ..     222     281 ..     217     309 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.14
     Neugrin  51 kskfvPtlerklkqDakvlkklglareilqlgasgdaskl.....lpaGkadklklnksvsgslLlpgkeassananhslaLkseeektqrtkatlkkk 144
                 +s+ +P+ + +l   a  l +  l+++ l+l+ s+  +k+     +++G+        ++s+   +  ++a+  ++n+ +a+k+ ++  +  +    +k
  KHJ33892.1  44 RSRSTPSFRNQLSSRAYTLNQKKLSEQNLHLKYSKAEEKIhanygVKNGR---EDAIVEISPD--TIDQLATDVHTNKETAIKVLNNIAEPSTVYSVEK 137
                 77777777777777777776666666666666665555441111133333...3333344443..2344566677777888888888777777666666 PP

     Neugrin 145 trkkqvqvleeakslvsateekGeq 169
                 t +++ q+   + +lv+ ++e+  +
  KHJ33892.1 138 TSQEEYQEKTLLLDLVEDISENKDP 162
                 6666666666666666666555444 PP

  == domain 2  score: 46.3 bits;  conditional E-value: 1.1e-15
     Neugrin   7 PeRrLtWeaieqiRYLkeefpeeWtvprLaeGFdvstDvirRvlkskfvPtlerklkqDa 66 
                 P +rL+ +aie iR L+  +pe +t  rLa  F++s++ irR+lksk+ P ++  l  +a
  KHJ33892.1 222 PLKRLSPDAIEGIRALHSQMPEYFTTARLAKEFKISPEAIRRILKSKWRPNIDEALDREA 281
                 889***********************************************9988776665 PP

>> MRP-L20  Mitochondrial ribosomal protein subunit L20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1       1.2   5.4e+03      74      93 ..      52      69 ..      39      82 .. 0.55
   2 !   28.3   0.4   3.7e-10   1.7e-06      83     134 ..     222     272 ..     184     296 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.2
     MRP-L20 74 lkkksekekkyhltkediee 93
                +++ s+  ++y+l++++ +e
  KHJ33892.1 52 RNQLSS--RAYTLNQKKLSE 69
                333333..555555555444 PP

  == domain 2  score: 28.3 bits;  conditional E-value: 3.7e-10
     MRP-L20  83 k.yhltkedieeirrLraeDPekwsrkkLakkFgcsklfvsmvteapkekkke 134
                     l+++ ie ir L+++ Pe +++++Lak+F++s+  ++ +++ +   + +
  KHJ33892.1 222 PlKRLSPDAIEGIRALHSQMPEYFTTARLAKEFKISPEAIRRILKSK--WRPN 272
                 2357************************************9999776..3333 PP

>> Rrf2  Transcriptional regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.014        64      27      58 ..     104     135 ..      99     136 .. 0.89
   2 ?    6.9   0.0    0.0018       7.9      19      47 ..     239     266 ..     227     267 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.014
                 -HHHHHHHHTS-HHHHHHHHHHHHHTTSEEEE CS
        Rrf2  27 sseeiaerqnispsylekilakLrkaglvksv 58 
                 +++++a+ + ++++ + k+l++ ++   v sv
  KHJ33892.1 104 TIDQLATDVHTNKETAIKVLNNIAEPSTVYSV 135
                 799******************99998888776 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0018
                 HSSTCC-B-HHHHHHHHTS-HHHHHHHHH CS
        Rrf2  19 keeeeepvsseeiaerqnispsylekila 47 
                 ++  e  ++++ +a++++isp+ +++il+
  KHJ33892.1 239 SQMPEY-FTTARLAKEFKISPEAIRRILK 266
                 444444.99******************97 PP

>> AbiEi_4  Transcriptional regulator, AbiEi antitoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   4.8e-05      0.21       5      37 ..     236     269 ..     234     269 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.8e-05
     AbiEi_4   5 elasrqv.Glfttrelea.aGispsalrrLvrkGw 37 
                 +l+ +q+  +ftt+ l++   isp a+rr +++ w
  KHJ33892.1 236 ALH-SQMpEYFTTARLAKeFKISPEAIRRILKSKW 269
                 455.55559********************999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2535.66
//
Query:       KHJ33893.1  [L=304]
Description: putative glutamate-cysteine ligase modifier subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-08   32.9   0.2    4.7e-08   32.6   0.2    1.2  1  Aldo_ket_red  Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   0.2   2.6e-12   4.7e-08      59     172 ..      91     218 ..      71     284 .. 0.88

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 2.6e-12
                   TTGGG-EEEEEE--SSSTTSSSS-HHHHHHHHHHHHHHHT-S-EEEEEE-S--TTS-.................HHHHHHHHHHHHHTTSEEEEEEE CS
  Aldo_ket_red  59 kkreeviiatKvdlrdaeiksglskeniresleeslkrLgtdyvDllllHrpdpslp................sieevldaleelvkeGkiraiGvS 139
                   ++r ++ i+ K+ ++ +  k+  ske  + +++  l++L+++y+Dll    p++ +                 +   ++  l+ l+++G ++ +Gv+
    KHJ33893.1  91 EQRSQYEITVKI-FYLS-EKDLRSKEYANDAIRFVLQKLDVEYIDLLIASFPNRLSNgetgkenedfseedieENVATWTELTLLQEKGIVKRLGVA 185
                   589999999999.6665.5677899*******************************9*************44444457788999999********** PP

                   S--HHHHHHHHHTTT--EEEEE-B-BTT-HHHH CS
  Aldo_ket_red 140 nfsveqlekakkkkkvkivavqveynllrelee 172
                    f+  +l k +k  kv++ ++q++   ++++ +
    KHJ33893.1 186 DFNNNKLGKFLKRVKVRPQVNQMNLKNYCKITP 218
                   ************************999966554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       786  (0.0438396); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2309.59
//
Query:       KHJ33894.1  [L=1045]
Description: putative mitogen-activated protein kinase-binding protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-18   66.1  12.9     0.0013   19.5   0.0    8.1  8  WD40      WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.024   14.6   0.3       0.13   12.3   0.0    2.4  2  WD40_3    WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0   0.00044         4      11      28 ..     158     175 ..     151     186 .. 0.87
   2 !   19.5   0.0   1.5e-07    0.0013       3      38 .]     196     234 ..     194     234 .. 0.85
   3 ?    0.9   0.1      0.11   9.6e+02      13      37 ..     254     276 ..     237     277 .. 0.66
   4 ?   -2.9   0.0       1.8   1.6e+04      10      18 ..     364     371 ..     357     386 .. 0.69
   5 ?    1.3   0.1      0.08   7.1e+02       7      38 .]     457     492 ..     451     492 .. 0.54
   6 !   12.9   0.0   1.8e-05      0.16       3      37 ..     549     586 ..     547     587 .. 0.81
   7 !   14.0   0.3   8.1e-06     0.073       2      36 ..     594     629 ..     593     630 .. 0.91
   8 !    8.9   0.1   0.00032       2.9       9      38 .]     751     785 ..     741     785 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00044
                 SSEEEEEEETTSSEEEEE CS
        WD40  11 ssvtslafspdgawlasG 28 
                 +s+t+la s dg++la+G
  KHJ33894.1 158 KSITCLALSFDGNLLAAG 175
                 57*************998 PP

  == domain 2  score: 19.5 bits;  conditional E-value: 1.5e-07
                 EEEEEESS.SSEEEEEEETTSSEEEE.E.ETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlas.G.sdDgtvriWd 38 
                 +l ++  H ++++++afspd+++la+ G + Dg ++iW+
  KHJ33894.1 196 PLIIINEHsNGIRAVAFSPDSKYLATlGnTNDGFLYIWS 234
                 5667789*889*************9866556*******5 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.11
                 EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriW 37 
                 +  + +  d++ ++  +  ++++iW
  KHJ33894.1 254 IKRMLWMGDNKIIT-VG-TRHIKIW 276
                 55665888888874.67.9****** PP

  == domain 4  score: -2.9 bits;  conditional E-value: 1.8
                 SSSEEEEEE CS
        WD40  10 Hssvtslaf 18 
                   s+t++a+
  KHJ33894.1 364 F-SITCIAV 371
                 3.69**965 PP

  == domain 5  score: 1.3 bits;  conditional E-value: 0.08
                 EESS.SSEEEEE.............EETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtsla.............fspdgawlasGsdDgtvriWd 38 
                 ++ H + v +l+             +sp           gt+++Wd
  KHJ33894.1 457 FSSHsNAVLGLCmiddnplnadfmtWSP----------SGTIKFWD 492
                 5678666877774444444444444444..........46666665 PP

  == domain 6  score: 12.9 bits;  conditional E-value: 1.8e-05
                 EEEEEESS.SSEEEEEEETTSSE..EEEEETTSEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgaw..lasGsdDgtvriW 37 
                 +l + ++H s++++++ +  +++  la++++D+tv ++
  KHJ33894.1 549 LLFEMRAHfSDINDIDLCETSTYtlLATCGRDRTVQLF 586
                 677889**999**99866666667699********875 PP

  == domain 7  score: 14.0 bits;  conditional E-value: 8.1e-06
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvri 36 
                  +++tl+ H  svt++   +d  +l+s+s D+tv+i
  KHJ33894.1 594 HLVQTLDEHsASVTGIIIAKDCEFLISSSTDRTVHI 629
                 57899****777**************9999****98 PP

  == domain 8  score: 8.9 bits;  conditional E-value: 0.00032
                 SS.SSEEEEE....EETTSSEEE.EEETTSEEEEEE CS
        WD40   9 GH.ssvtsla....fspdgawla.sGsdDgtvriWd 38 
                 GH +++t+la     + d   ++ +G  Dg +++W+
  KHJ33894.1 751 GHsTNITDLAlherLDCDEITVIsTGF-DGIIMMWS 785
                 99666****866666666666661556.*******5 PP

>> WD40_3  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1      0.89     8e+03      12      30 ..      64      82 ..      63      83 .. 0.86
   2 ?   12.3   0.0   1.4e-05      0.13       5      56 ..     202     259 ..     199     259 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.89
      WD40_3 12 klfpnpsGtrlvfiDekgd 30
                ++f+  +G  +v+++ k d
  KHJ33894.1 64 RIFAYTAGATVVVVNTKDD 82
                6889999*******99976 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 1.4e-05
      WD40_3   5 rHsvgIkklfpnpsGtrlvfiDekgdgfvynPvseelleipdfpst......vkgvLW 56 
                 +Hs+gI+++   p+  +l+   +++dgf+y    ++ +   +f s+      +k++LW
  KHJ33894.1 202 EHSNGIRAVAFSPDSKYLATLGNTNDGFLYIWSINQKTNTAKFHSSnkctsfIKRMLW 259
                 5*****************************9999999999999888777777788887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1045 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.28s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 6992.21
//
Query:       KHJ33895.1  [L=266]
Description: putative serine threonine-protein kinase bud32 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-10   39.6   0.0    6.7e-10   38.7   0.0    1.4  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
    3.4e-09   36.5   0.0    4.1e-09   36.2   0.0    1.1  1  Pkinase         Protein kinase domain
      1e-06   28.9   0.0     0.0069   16.3   0.0    2.5  2  APH             Phosphotransferase enzyme family
    6.9e-05   22.3   0.0    9.9e-05   21.7   0.0    1.1  1  Pkinase_Tyr     Protein tyrosine kinase
    0.00048   19.0   0.1    0.00067   18.5   0.1    1.1  1  Pkinase_fungal  Fungal protein kinase
     0.0016   18.1   0.1     0.0067   16.0   0.0    2.0  2  RIO1            RIO1 family
  ------ inclusion threshold ------
      0.057   13.0   0.1       0.61    9.7   0.1    2.5  1  WaaY            Lipopolysaccharide core biosynthesis protein 


Domain annotation for each model (and alignments):
>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.7   0.0   2.6e-13   6.7e-10      49     191 ..      68     221 ..      58     238 .. 0.77

  Alignments for each domain:
  == domain 1  score: 38.7 bits;  conditional E-value: 2.6e-13
         Kdo  49 yrfklgrtravrEfrllkrLeeagvavpkpvaagavkvgle...yrAlllterlegaqdLedllakwae.laeelkrallkavgrliaklhragvnHad 143
                 + ++l + r+  E r+l + +++gv+vp   a  +++  l     + ++l    +++   ++ +   ++  ++e  + +++a+g +i klh++g+ H+d
  KHJ33895.1  68 LDARLTKHRILSEARVLIKCRKEGVPVPAVYALDEKGGWLMiewIQGVVLRVMFNDWLRNQTECDM-RNlHSNETLKGIMRAIGLAIGKLHSIGIVHGD 165
                 55678999********************88777777665544423334443344444444444443.33688888999********************* PP

         Kdo 144 lyaknillqqee.........eeeaeiwliDldkarlrlradrwrekdLarLkrsfl 191
                 l   n+ +++e+           + ei+liD+  a + + +d +r  dL  L+r f 
  KHJ33895.1 166 LTTSNLIMKAEQlndnlppneLIQGEIVLIDFGLASQSS-QDEDRAVDLYVLERAFG 221
                 ************98888774334679*******999888.9*************876 PP

>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.0   1.6e-12   4.1e-09      42     153 ..      74     208 ..      30     224 .. 0.76

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 1.6e-12
                 HHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEB....HHHHHH......HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEE CS
     Pkinase  42 ekkvlrEikilkklkhpnivrlyevfeekdelylvleyvegge....ladlle......rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiL 130
                 ++++l+E ++l k++ + +     +  +++  +l+ e+++g      ++d+l+       +   s+e++k i++ i  ++  lHs gi+H Dl ++N++
  KHJ33895.1  74 KHRILSEARVLIKCRKEGVPVPAVYALDEKGGWLMIEWIQGVVlrvmFNDWLRnqtecdMRNLHSNETLKGIMRAIGLAIGKLHSIGIVHGDLTTSNLI 172
                 36888999999999988887666667778888888999998875555666666555554334456669******************************* PP

                 EE.T............TTEEEE-SGTTSEESSSSCS CS
     Pkinase 131 id.e............kgelKitDFGlakelesssk 153
                 ++ e            +ge+ ++DFGla++ +++++
  KHJ33895.1 173 MKaEqlndnlppneliQGEIVLIDFGLASQSSQDED 208
                 **55788888887777777***********999886 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   2.7e-06    0.0069      34      85 ..      74     136 ..      61     160 .. 0.72
   2 !   11.2   0.0    0.0001      0.26     164     228 ..     157     238 ..     121     255 .. 0.65

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.7e-06
                 HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SS................H CS
         APH  34 aeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvpgrsllr................k 85 
                 + +i +e+++l   +k gvpvP+v+a    de  g  +++ie++ g +l+                  
  KHJ33895.1  74 KHRILSEARVLIKCRKEGVPVPAVYA---LDEKGG--WLMIEWIQGVVLRVmfndwlrnqtecdmrnL 136
                 567899********************...677777..8999999999998855555555555555543 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.0001
                 S-EEEE-SS-SGGGEEEC................TTEEEEE---TT-EEE....ECCHHHHCCH.HH.CSCHCCCHCHHHHHHHH CS
         APH 164 lptvllHgDlhpgNllvd..............pddgrvtGviDfedaglg....pplyDlavll.rs.wtseldpeflaallray 228
                  + +++HgDl + Nl+++              ++   v  +iDf++a+ +    ++++Dl vl  +   t+++ + +  + l+ay
  KHJ33895.1 157 HSIGIVHGDLTTSNLIMKaeqlndnlppneliQG-EIV--LIDFGLASQSsqdeDRAVDLYVLErAFgSTHPQLEVLFSEVLDAY 238
                 46799*************9999888876665333.333..899988887622224444444444322334445555555555555 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   3.9e-08   9.9e-05      45     158 ..      74     208 ..      66     216 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 3.9e-08
                  HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT.......CTTTSBH.HHHHHHHHHHHHHHHHHHHTTEEEST-SGGGE CS
  Pkinase_Tyr  45 keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkk.......ekekltl.kdllsfalqvAkGmeyLeskklvHrdlaarNv 134
                  k+++l+ea+++ k++++ +       ++e+  ++++e+++g  L+ + ++        + ++l+  ++l  ++  +  ++  L+s  +vH dl++ N 
   KHJ33895.1  74 KHRILSEARVLIKCRKEGVPVPAVYALDEKGGWLMIEWIQGVVLRVMFNDWlrnqtecDMRNLHSnETLKGIMRAIGLAIGKLHSIGIVHGDLTTSNL 171
                  678999********99998777777777888899999999987764444334444887445555405566789999********************** PP

                  EEEE.............TTEEEE-STTTHEETTTSSE CS
  Pkinase_Tyr 135 Llse.............nkvvkisDfGLardiekdde 158
                  +++              +  + + DfGLa++ ++d++
   KHJ33895.1 172 IMKAeqlndnlppneliQGEIVLIDFGLASQSSQDED 208
                  **9999*******99998899999******9977665 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.1   2.6e-07   0.00067     306     370 ..     139     211 ..     133     226 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 2.6e-07
  Pkinase_fungal 306 kellealrDaI.kghrsLflkagiLHrDiSenNilitdskke........gerkglLiDLDlakelsddssesg 370
                      e l+++  aI  +  +L+  +gi+H D  + N+++  ++ +         + + +LiD+ la++ s+d+ +++
      KHJ33895.1 139 NETLKGIMRAIgLAIGKLH-SIGIVHGDLTTSNLIMKAEQLNdnlppnelIQGEIVLIDFGLASQSSQDEDRAV 211
                     5667777777734667899.****************9554335688877788899************9888775 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   2.6e-06    0.0067      52     143 ..      74     177 ..      56     179 .. 0.65
   2 ?   -4.1   0.0         4     1e+04     142     152 ..     190     200 ..     188     210 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.6e-06
                 HHHHHHHHHHHHHHHHTT--S--EEEEET..TEEEEE--EETTEEGGBH.....HHCG-....HHHHHHHHHHHHH...HHHHHHHTSTEEESS-STTS CS
        RIO1  52 klwaekEfrnLkrleeagvpvPkpielkr..hvlvmefigedgvaapkl.....kdvee....eeeaeelyeevle...emrklykeaglvHaDLSeyN 136
                 k     E r L + +++gvpvP +++l +    l+ e+i+  gv +  +     ++ +e    + + +e ++ +++     +  ++  g+vH+DL   N
  KHJ33895.1  74 KHRILSEARVLIKCRKEGVPVPAVYALDEkgGWLMIEWIQ--GVVLRVMfndwlRNQTEcdmrNLHSNETLKGIMRaigLAIGKLHSIGIVHGDLTTSN 170
                 555667999***************9986622589999999..4444322111112222222223334445555555332334457799*********** PP

                 EEEETTE CS
        RIO1 137 vlvdedk 143
                 ++++ ++
  KHJ33895.1 171 LIMKAEQ 177
                 **99876 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 4
                 TEEEE--GTTE CS
        RIO1 142 dkvviIDvsQa 152
                 +++v+ID++ a
  KHJ33895.1 190 GEIVLIDFGLA 200
                 68999999654 PP

>> WaaY  Lipopolysaccharide core biosynthesis protein (WaaY)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1   0.00024      0.61     118     172 ..     118     177 ..      86     252 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00024
        WaaY 118 yimiieyiegielvdmpeid..devka...kikqsieklhqlgmvsgdphrgnfivkkde 172
                  +m+ +++     +dm +++  + +k+    i  +i klh+ g+v gd    n+i+k ++
  KHJ33895.1 118 RVMFNDWLRNQTECDMRNLHsnETLKGimrAIGLAIGKLHSIGIVHGDLTTSNLIMKAEQ 177
                 46666677777778888775214466511145568999***************9999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 1980.58
//
Query:       KHJ33896.1  [L=380]
Description: putative bzip transcription factor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-10   40.3   8.8    9.5e-10   38.4   8.8    2.0  1  bZIP_1    bZIP transcription factor
    1.5e-05   25.0  10.7    1.5e-05   25.0  10.7    2.7  3  bZIP_2    Basic region leucine zipper
  ------ inclusion threshold ------
      0.035   13.9  16.0      0.054   13.3  16.0    1.2  1  ERM       Ezrin/radixin/moesin family


Domain annotation for each model (and alignments):
>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.4   8.8   1.6e-13   9.5e-10       6      58 ..     215     267 ..     210     270 .. 0.93

  Alignments for each domain:
  == domain 1  score: 38.4 bits;  conditional E-value: 1.6e-13
                 XXXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   6 rekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevek 58 
                 +e+r ++N+++Ar++R R++++i++Le++ +   +eN +L+ +++ l++e+  
  KHJ33896.1 215 KERRQLRNKVSARAFRSRRKEYINQLEDEIALRINENVDLRAQIQALMEENVR 267
                 8***********************************************99765 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.9      0.28   1.7e+03      38      54 .]     157     173 ..     156     175 .. 0.78
   2 !   25.0  10.7   2.5e-09   1.5e-05       3      52 ..     212     262 ..     210     264 .. 0.94
   3 ?   -2.5   0.7      0.94   5.6e+03      25      31 ..     310     316 ..     298     329 .. 0.56

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.28
                 HHHHHHHHHHHHHHHHH CS
      bZIP_2  38 eeeNaqLrqkveqLeke 54 
                 ee++ qL++ ++q ++e
  KHJ33896.1 157 EEKITQLLKSIRQTNQE 173
                 78888998888887776 PP

  == domain 2  score: 25.0 bits;  conditional E-value: 2.5e-09
                 XXXXXXXX.XXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2   3 deyrerRr.kNreAarrsRekkkakeeeleervkeLeeeNaqLrqkveqLe 52 
                  +++erR  +N  +ar +R ++k++ ++le+++    +eN  Lr+++++L 
  KHJ33896.1 212 LSSKERRQlRNKVSARAFRSRRKEYINQLEDEIALRINENVDLRAQIQALM 262
                 5789********************************************995 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.94
                 HHHHHHH CS
      bZIP_2  25 akeeele 31 
                 + + +le
  KHJ33896.1 310 QAQLQLE 316
                 3333333 PP

>> ERM  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3  16.0     9e-06     0.054      10     173 ..     156     327 ..     152     336 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 9e-06
         ERM  10 leerLkqlqeeaekaqeaLreseetaelLaekarraeeeaelLeqkaaeaeeeiqrlkesaekeeeekeklerklreaeleaarleeeserkeeeaerL 108
                 +ee+++ql + +++++++L+ s e a      +  +++e+e+ e ++  a ee ++l  +++++ ++k +  +   + ++ +++le+e   + +e+  L
  KHJ33896.1 156 VEEKITQLLKSIRQTNQELEISGEHAISNFSTRSLSKKEEEMDEDEKLLASEEGKKLSSKERRQLRNKVSARAFRSRRKEYINQLEDEIALRINENVDL 254
                 699************************************************************************************************ PP

         ERM 109 keeleeareaeeeakekllealstpsks.......es.eenveeseteeeeenseeesaeletdeveklslei 173
                 ++++++  e++ + +   + ++s+ps +       ++ ++n +    ++++e++++++ +le+++++++ +++
  KHJ33896.1 255 RAQIQALMEENVRLSDFTRMLVSSPSFTgffdalaINpSSNLNVRAYQQQSEKTNQAQLQLEKEANHHVIQQQ 327
                 *******999999999999999999777***998733233333333333333344444555555444433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1699  (0.0947627); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 2630.35
//
Query:       KHJ33897.1  [L=86]
Description: putative cytochrome c oxidase assembly protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-24   84.6   2.0    6.2e-24   84.1   2.0    1.3  1  PET117    PET assembly of cytochrome c oxidase, mitochondrial
     0.0053   17.2   0.6      0.007   16.9   0.6    1.1  1  COX16     Cytochrome c oxidase assembly protein COX16


Domain annotation for each model (and alignments):
>> PET117  PET assembly of cytochrome c oxidase, mitochondrial
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.1   2.0   6.9e-28   6.2e-24       1      70 []       4      69 ..       4      69 .. 0.99

  Alignments for each domain:
  == domain 1  score: 84.1 bits;  conditional E-value: 6.9e-28
      PET117  1 AsKitLglsvlltaatvvgVHylQrlerealrqGvirDaerqaeKerkrkenkaeleeqkelrkkyekvQ 70
                AsK+tL++++++++ t+++VHy Q++e++a++qGvirD e+q+ K    ke+++e+e q +l+ +y+k+Q
  KHJ33897.1  4 ASKVTLASTSFFALSTIIFVHYAQKAEKAAMHQGVIRDLESQRLK----KERQQEFELQSALESEYRKIQ 69
                8********************************************....79*****************98 PP

>> COX16  Cytochrome c oxidase assembly protein COX16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.6   7.8e-07     0.007      13      71 ..      12      81 ..       7      84 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 7.8e-07
       COX16 13 gGsfgLteftqlryevrdrk.......vkelskeealelkkkrrkv....dleeeyerlqak..ldlddWen 71
                 + f+L+ ++ ++y ++ +k        + l+ +   +  ++++++     le+ey+++q    +++dd+e 
  KHJ33897.1 12 TSFFALSTIIFVHYAQKAEKaamhqgvIRDLESQRLKK--ERQQEFelqsALESEYRKIQHVvtQNNDDYES 81
                57899***************999866544444444333..33333466889**********98899999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1493  (0.0832729); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.24s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 695.50
//
Query:       KHJ33898.1  [L=143]
Description: hypothetical protein EV44_g3793 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.056   12.9   0.0      0.077   12.5   0.0    1.1  1  PipA      PipA protein


Domain annotation for each model (and alignments):
>> PipA  PipA protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   4.3e-06     0.077      96     144 ..      35      83 ..      30      91 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.3e-06
        PipA  96 eqrwllgageafettvadedlklsegrkvialnlddsdddsitehyesn 144
                 e   ll +g+af+ +v++e++++ e r        d++ +s+te   s+
  KHJ33898.1  35 ESHLLLATGNAFGKSVTNEKMHSEEYRSSDLNYYSDNNMESFTEEKASK 83 
                 77889******************99998877777888899999987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (143 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 1174.80
//
Query:       KHJ33899.1  [L=342]
Description: putative short-chain dehydrogenase reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.9e-36  123.8   0.0    1.1e-35  122.9   0.0    1.4  1  adh_short     short chain dehydrogenase
    1.8e-26   93.2   0.0    2.7e-26   92.6   0.0    1.2  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
    9.5e-10   38.7   0.3    2.8e-09   37.2   0.3    1.6  1  KR            KR domain
     0.0041   16.6   0.0     0.0058   16.1   0.0    1.3  1  Epimerase     NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.015   15.2   0.0      0.028   14.3   0.0    1.4  1  UPF0146       Uncharacterised protein family (UPF0146)


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.9   0.0     3e-39   1.1e-35       2     190 ..      82     266 ..      81     271 .. 0.91

  Alignments for each domain:
  == domain 1  score: 122.9 bits;  conditional E-value: 3e-39
                 EEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGCSHHH CS
   adh_short   2 vvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfselseee 100
                  vl+tG++sGIG+ +ake+ak+G+kv+++d +e k     +++     +++++++Dvt+ +e+ ++   ++k++g   vL+nNAGi+  +++   +e+ 
  KHJ33899.1  82 LVLITGGCSGIGLLMAKEFAKRGVKVIILDLREPK-----ESVPV---NVHFYKCDVTSTAEIADTAISIRKDHGDPTVLINNAGIATLNSIFGGTEKS 172
                 69**************************9998553.....34443...49************************************9999999****** PP

                 HHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGT....EEEEEEEESSBSSHHHHHH CS
   adh_short 101 wervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptg....irvnavaPGlvdTdmakel 190
                 +++++evN  + f+++r+++pam++++ G++v+++S+a+ v  a  + Y+++Ka    + + l+ el++      ir ++++P+ ++T++ +e 
  KHJ33899.1 173 IRDTFEVNTISHFWMVREFVPAMVRKNHGHVVTIASMASYVVHALNVDYCCTKASALVFHEGLSSELKNIYdapnIRTTTINPAWIRTPLIEEF 266
                 ******************************************************999999998888876544455*************998775 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.6   0.0   7.5e-30   2.7e-26       4     187 ..      90     271 ..      87     289 .. 0.88

  Alignments for each domain:
  == domain 1  score: 92.6 bits;  conditional E-value: 7.5e-30
                   TSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTTSEEEE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHHHHHHH CS
  adh_short_C2   4 sgIGraiAkalaeeGaevvltdlneeakkrveelaeelgaevlecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsreefdrald 100
                   sgIG  +Ak++a++G +v++ dl+e +    e++   ++ ++++cDVt+++++++++  +++++g   +l+nnagia+   +++   ++++++++++
    KHJ33899.1  90 SGIGLLMAKEFAKRGVKVIILDLREPK----ESV--PVNVHFYKCDVTSTAEIADTAISIRKDHGDPTVLINNAGIATL--NSIFGGTEKSIRDTFE 178
                   8*************************9....222..356778*************************************..**************** PP

                   HHTHHHHHHHHHHHHHCTSC..CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGG....GTEEEEEEEE--BHCTGGGGSTTHHH CS
  adh_short_C2 101 vnlyslfllakaalplmkeg..gsivnlssvgaervvpnynaygaaKaalealtrylAvelgp....kgiRvNavspgpikTlaasgikgfde 187
                   vn+ s f ++++++p+m ++  g +v+++s+++ +v + +  y+ +Ka+   +   l  el +     +iR  ++ p +i+T++ +++ ++++
    KHJ33899.1 179 VNTISHFWMVREFVPAMVRKnhGHVVTIASMASYVVHALNVDYCCTKASALVFHEGLSSELKNiydaPNIRTTTINPAWIRTPLIEEFVHSKH 271
                   ***************6655448*********8887777777*********999999999987654447***************9888766555 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.3   7.7e-13   2.8e-09       3     153 ..      83     225 ..      82     238 .. 0.91

  Alignments for each domain:
  == domain 1  score: 37.2 bits;  conditional E-value: 7.7e-13
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT-- CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleemt 101
                 +litGG+ g+Gl +a+  a++g + ++l  R+  ++          e+  ++v+++++Dv++ ++++ +  +i+++++  +  i+ Ag++  + +   t
  KHJ33899.1  83 VLITGGCSGIGLLMAKEFAKRGVKVIILDLRE--PK----------ESVPVNVHFYKCDVTSTAEIADTAISIRKDHGDPTVLINNAGIATLNSIFGGT 169
                 69***************************999..23..........34459**************************99999***************** PP

                 HHHHHHHHTTT.THHHHHHHHHTTT...S--SEEEEEEEHHHHH--TT-HHHHHHH CS
          KR 102 aedleqvlapK.vkGawnLhelled...esldffvlfSSiagllgsagqanYaaaN 153
                 +++++  ++   ++  w + e+++    ++  ++v+++S+a+ + +a  ++Y ++ 
  KHJ33899.1 170 EKSIRDTFEVNtISHFWMVREFVPAmvrKNHGHVVTIASMASYVVHALNVDYCCTK 225
                 ********9863788999999999888899**********************8765 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.6e-06    0.0058       1      82 [.      83     167 ..      83     215 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.6e-06
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHCEEEE--TT-HHHHHH....HHHHH.T-SEEEE--S---HHHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledlelveldltdrsaler....lfkee.qpdavihlAavggvaasse 82 
                 +l+tG+   iG  ++k+++++g++vi ld +  + +++   +++++++d+t  +++++    + k++ +p++ i+ A++++ +  + 
  KHJ33899.1  83 VLITGGCSGIGLLMAKEFAKRGVKVIILDLR--EPKESVPVNVHFYKCDVTSTAEIADtaisIRKDHgDPTVLINNAGIATLNSIFG 167
                 79*****************************..5555566666*********99665411114466678888888888777665554 PP

>> UPF0146  Uncharacterised protein family (UPF0146)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   7.8e-06     0.028      23      62 ..      91     132 ..      74     144 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 7.8e-06
                 TT--HHHHHHHHHS-EEEEE-SS-S......STTEE---SSS CS
     UPF0146  23 GrkldvaealakrgvdlvatDikek..kakegvrivrDDvtd 62 
                 G  l +a+++akrgv++++ D++e    ++ +v++++ Dvt+
  KHJ33899.1  91 GIGLLMAKEFAKRGVKVIILDLREPkeSVPVNVHFYKCDVTS 132
                 4446689***************98755799**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2507.88
//
Query:       KHJ33900.1  [L=467]
Description: putative f-box domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.039   13.9   0.6      0.039   13.9   0.6    2.0  2  F-box     F-box domain


Domain annotation for each model (and alignments):
>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.6   2.2e-06     0.039       5      40 ..     108     143 ..     104     146 .. 0.93
   2 ?   -3.5   0.8      0.59   1.1e+04      29      35 ..     308     314 ..     307     314 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.2e-06
                 HS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTH CS
       F-box   5 rLPsevlrhILerLplsdllalrrVSkgwrilidsd 40 
                  L+se++++I e+L+ sd   l+  Sk++ + id++
  KHJ33900.1 108 KLSSELWKKITEYLSISDTMCLAISSKTLLSRIDKK 143
                 79*****************************99975 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 0.59
                 T-HHHHH CS
       F-box  29 VSkgwri 35 
                 ++ +wr+
  KHJ33900.1 308 CCSHWRD 314
                 9****96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 3525.79
//
Query:       KHJ33901.1  [L=151]
Description: putative effector protein ec2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-10   40.2  12.7    3.8e-10   39.7  12.7    1.2  1  CFEM      CFEM domain


Domain annotation for each model (and alignments):
>> CFEM  CFEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7  12.7   2.1e-14   3.8e-10       2      65 ..      43     109 ..      42     110 .. 0.92

  Alignments for each domain:
  == domain 1  score: 39.7 bits;  conditional E-value: 2.1e-14
                 TTTS-GGGTCGGG---TTSS..S-.TT-HHHHH...H-HHHHHHHHHHHHHH--THHHHHHHHHHHHHH CS
        CFEM   2 lsalPkCaqdClaeavkkss.gCa.kddtaCiC...tnaklqseitdCvtaaCtaeealaavnaasslC 65 
                 ++++PkCa +C+++     + gC+ ++d+aC C   t+++++++ t+Cv +aC+ +ealaa  a +++C
  KHJ33901.1  43 VQTIPKCAISCIVQPP--IDaGCKsAADFACTCekkTKKAITKAETPCVLKACGLKEALAASRAGNAVC 109
                 799***********66..4558**9********9999999***************************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.21s 00:00:00.59 Elapsed: 00:00:00.35
# Mc/sec: 1303.73
//
Query:       KHJ33902.1  [L=680]
Description: putative methylenetetrahydrofolate reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-98  327.2   0.0    1.2e-97  326.7   0.0    1.2  1  MTHFR     Methylenetetrahydrofolate reductase


Domain annotation for each model (and alignments):
>> MTHFR  Methylenetetrahydrofolate reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  326.7   0.0  6.7e-102   1.2e-97       8     285 ..      13     309 ..       3     311 .. 0.92

  Alignments for each domain:
  == domain 1  score: 326.7 bits;  conditional E-value: 6.7e-102
                 .SS-EEEEEE---SSHHHHHHHHHHHHHHGGGG.-SEEEE---CCCTTHHHHHHHHHHHHHHH-S-EEEEEESTTS-HHHHHHHHHHHHHCT--EEEEE CS
       MTHFR   8 egkalisfEffpPkteegernLleridrleevk.plfvdvTwgaggstaeltssiakviqqelgleailhlTctdaskeeldkalekakelGirnilAL 105
                 +g+  +s+EffpPkt  g++nL  r++r++++  plfv+vTwg+ggsta+ ++++a+  q elgl+++lhlTct+ s + +d+al+ka+elGirnilAL
  KHJ33902.1  13 HGSNYFSLEFFPPKTIMGVSNLRTRLSRMSQALkPLFVTVTWGTGGSTAANSLELAELCQRELGLTTCLHLTCTNSSPNVIDEALKKAHELGIRNILAL 111
                 78999************************99878***************************************************************** PP

                 --S--TT-GG...C---S--.--SHHHHHHHHHHHHCGGSEEEEEE-TT--T.....T-S-HHHHHHHHHHHHHCT--EEEEEE-S-HHHHHHHHHHHH CS
       MTHFR 106 rGDppkdedk...weekeee.fkyaldLvrlireeygdlfdigvaaYPevhp.....eaksleadlkylkeKvdaGAdfiitQlffdvdkflkfveqvr 195
                 rGDpp++e     +e +e++ f+ a dLv++i+++yg++f++gvaaYPe+h+      ++s+e+dl yl eKv+aGAdfi+tQlffd+d+++ f++++r
  KHJ33902.1 112 RGDPPRKEYMsadLEMEESKkFEWAIDLVKYIKKKYGNYFCVGVAAYPEGHAdgnhpDSQSFEHDLPYLVEKVKAGADFIMTQLFFDTDAYDVFERRLR 210
                 *****9975422233333335****************************9988888899**************************************** PP

                 HCT-....SS-EEEEE---SSHHHHHHHHHHHT----HHHHCCCTCHCT-HHHHHHHHHHHHHHHHHHHHHCT.....--EEEEE-TT--HHHHHHHHH CS
       MTHFR 196 eagi....dipiipgimpiksykslkrlaklskvkiPqelldrleeikdddeavkkigielavemvkkllaeg.....vkglHlytlnkekaileileq 285
                 e+ +     ipiipg+mpi+sy+++kr+akl++vkiP ++ +rl++   dde+ k++g++++ e++ ++ ++       +g+Hlytln+eka+  i+e+
  KHJ33902.1 211 EHESgcfeMIPIIPGLMPIQSYQMIKRIAKLTHVKIPPKIAARLDTTIGDDELSKEVGVDIVSEIILHIQQNPlpalgRRGFHLYTLNLEKAVSLIIER 309
                 9876668889*********************************************************99999755444689***************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (680 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       479  (0.0267165); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.21s 00:00:00.81 Elapsed: 00:00:00.38
# Mc/sec: 5311.49
//
Query:       KHJ33903.1  [L=503]
Description: putative glutathione synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   2.1e-137  457.9   0.0   2.4e-137  457.7   0.0    1.0  1  GSH_synth_ATP  Eukaryotic glutathione synthase, ATP binding d
    3.8e-33  114.0   0.0      7e-33  113.2   0.0    1.5  1  GSH_synthase   Eukaryotic glutathione synthase
  ------ inclusion threshold ------
      0.077   12.9   0.0       0.19   11.6   0.0    1.6  1  DUF4092        Domain of unknown function (DUF4092)
       0.13   12.1   0.0       0.62    9.8   0.0    2.0  2  UPF0193        Uncharacterised protein family (UPF0193)


Domain annotation for each model (and alignments):
>> GSH_synth_ATP  Eukaryotic glutathione synthase, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  457.7   0.0  5.4e-141  2.4e-137       2     375 .]       8     502 ..       7     502 .. 0.95

  Alignments for each domain:
  == domain 1  score: 457.7 bits;  conditional E-value: 5.4e-141
                    xxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  GSH_synth_ATP   2 eqleelveeakdwalahGllvr....kaekkekkessesathapvtLlPspfprklfeeAvevqkayneLyakvasdeefLeevleevikvDeFta 93 
                    ++ + l++ ++dw++++Gl+++    ++++ ++++++e++t +p+tL Pspfpr++fe+A +vq++yn+Lya +++de+fL+ ++ e+++ D+F+ 
     KHJ33903.1   8 NEEQYLISAISDWSISNGLAIKslmyPNQNVSTDSKNEVITPVPLTLSPSPFPRTCFEQALAVQRDYNHLYALISQDEDFLRGIVDEIRDLDDFIT 103
                    67899***************9999986777777788999********************************************************* PP

                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxx RF
  GSH_synth_ATP  94 kLweiyekvkkeglvqklslglfRsDYllheeee.keelslkqvEfNtisssfgglsskvselhryllkkekkkk...sllksnelpenealeela 185
                    kLw i++kvk+eg++q+lslglfRsDY++  +ee ++++++kqvEfNti++sf++lss+++elhr+l+++ ++++   ++ + ++lpen+++++++
     KHJ33903.1 104 KLWGIHQKVKNEGYTQNLSLGLFRSDYMVSIDEEvHDQPRIKQVEFNTIAASFAALSSRICELHRFLAQDFYHYTkdyHSFSISDLPENKSIQGIV 199
                    *****************************998887899*******************************4444444556677777*********** PP

                    xxxxxxxxxxxx.................................................................................... RF
  GSH_synth_ATP 186 eglakAhkaysk.................................................................................... 197
                    +gl++A+++y+k                                                                                    
     KHJ33903.1 200 SGLRTAFNQYTKssskanrtciiflvqesernifdqrhleyalkksdppipvfrlpfseilehtkikntvnrellyflptdpivvfevavayfraa 295
                    **********77788999****************************************************************************** PP

                    ..........................xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx..xxx RF
  GSH_synth_ATP 198 ..........................PsiatqLagtKkvqqvLakpgvLerfl.eekeeveklretFaglysLdkdese.gkeavklalee..pek 263
                                              Psi+tqLag+KkvqqvL ++ vL++f+  +++++++l++tF+++y+Ld++  + g +a++lal++  +++
     KHJ33903.1 296 ydpldypnqsawdarfqiersyaikcPSILTQLAGSKKVQQVLVTSPVLNTFFpADESRLSNLKDTFTDIYPLDDS--PtGLKAQELALDTilCQN 389
                    ****************************************************6589999**************754..44*********653378* PP

                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxx RF
  GSH_synth_ATP 264 yVLKPqrEGGGnNiYgedipefLkklkeeersaYILMelieppavknvlvraegevekeevisELGiygtilfkke..evlvneeaGyllRtKass 357
                    yVLKPqrEGGGnNiY+++ip fLk+l++++++ YILM+ i++p+v+n+++r +g++e++ v+ ELGiyg +l++++  ++l nee+GyllRtK+++
     KHJ33903.1 390 YVLKPQREGGGNNIYRSAIPIFLKSLPKSKWKCYILMKIIKTPQVQNIILR-NGNTERGGVVVELGIYGSCLWNNAtkKILLNEETGYLLRTKGDQ 484
                    ***************************************************.999*******************9988****************** PP

                    xxxxxxxxxxxxxxxxxx RF
  GSH_synth_ATP 358 sdegGVaaGfgvlDsplL 375
                    s+egGV aG+g+lDs++L
     KHJ33903.1 485 SEEGGVSAGYGCLDSCYL 502
                    ****************98 PP

>> GSH_synthase  Eukaryotic glutathione synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.2   0.0   1.6e-36     7e-33       1     103 []     219     329 ..     219     329 .. 0.97

  Alignments for each domain:
  == domain 1  score: 113.2 bits;  conditional E-value: 1.6e-36
                   -EEEEEE-TT-TTHHHHHHHHHHHHHCC..-EEEEE-HHHHHHHEEE...TT-EEEETTT......EEEEEEEECS-SSGGG--SHHHHHHHHHHHH CS
  GSH_synthase   1 aivlfvvqenernvfDqrlleyellekh..ikvirvtleelkeetkleekekkkllldkk......kevsvvYfRagYapkdypseeeweaRlllEr 89 
                   ++++f+vqe ern+fDqr+ley+l++++  i+v+r+ ++e+ e+tk++++ +++ll+  +      +ev+v+YfRa Y+p dyp++++w+aR ++Er
    KHJ33903.1 219 TCIIFLVQESERNIFDQRHLEYALKKSDppIPVFRLPFSEILEHTKIKNTVNRELLYFLPtdpivvFEVAVAYFRAAYDPLDYPNQSAWDARFQIER 315
                   69************************99*******************9999999999878899********************************** PP

                   SSSEEET-HHHHHH CS
  GSH_synthase  90 ssaikcPsiayqLa 103
                   s aikcPsi +qLa
    KHJ33903.1 316 SYAIKCPSILTQLA 329
                   ************96 PP

>> DUF4092  Domain of unknown function (DUF4092)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   4.3e-05      0.19      26      57 ..      89     120 ..      66     131 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4.3e-05
     DUF4092  26 rkavddsgqiqavieklwgatadaqregykkv 57 
                 r +vd+  ++ + i klwg ++++++egy + 
  KHJ33903.1  89 RGIVDEIRDLDDFITKLWGIHQKVKNEGYTQN 120
                 7899*************************875 PP

>> UPF0193  Uncharacterised protein family (UPF0193)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.27   1.2e+03     156     178 ..      83     105 ..      67     115 .. 0.85
   2 ?    9.8   0.0   0.00014      0.62      17      65 ..     210     257 ..     193     296 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.27
     UPF0193 156 kevDrfeelvkeIeeRkeFLeeM 178
                 +++D +  +v+eI++  +F++++
  KHJ33903.1  83 QDEDFLRGIVDEIRDLDDFITKL 105
                 678999***********999876 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00014
     UPF0193  17 pkpakyskeTqellkvlmeEskLtnlqrrqieeslkkGea.lPlskkpts 65 
                 +k  + sk  +  +  l++Es  + + +r++e++lkk ++ +P+   p s
  KHJ33903.1 210 TK--SSSKANRTCIIFLVQESERNIFDQRHLEYALKKSDPpIPVFRLPFS 257
                 33..247888889999********************98853676555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (503 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 3857.72
//
Query:       KHJ33904.1  [L=752]
Description: putative sda1 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-80  271.5  55.9    2.5e-80  270.5  47.0    3.0  2  SDA1           SDA1
    3.2e-21   75.4   0.0    8.9e-21   74.0   0.0    1.8  1  NUC130_3NT     NUC130/3NT domain
  ------ inclusion threshold ------
       0.69   10.1   3.8       0.42   10.8   0.5    2.4  2  Mss4           Mss4 protein


Domain annotation for each model (and alignments):
>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.7   1.5    0.0059        35     149     284 ..     254     281 ..     186     325 .. 0.59
   2 !  270.5  47.0   4.2e-84   2.5e-80       1     348 []     420     744 ..     420     744 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.0059
        SDA1 149 keekeeeeeeeeeeeeeeeeeeeeeekekkkkkakeaseeekkkekeeekiskaselattrILTpaDFaklkelraeaavkkqlesakrkkkkkkdeee 247
                 k++                                                                                                
  KHJ33904.1 254 KHQ------------------------------------------------------------------------------------------------ 256
                 111................................................................................................ PP

        SDA1 248 eeaeksedlvtasdieglakkrkatkeerlasvkegr 284
                             s+i +++kk k++ ee +++vk++ 
  KHJ33904.1 257 ------------SSINKKRKKSKKNLEEAVKKVKKQE 281
                 ............1222222222222222222222211 PP

  == domain 2  score: 270.5 bits;  conditional E-value: 4.2e-84
        SDA1   1 mnedLLqDLveYkkskdKgVmmAArsLisLyRevnPelLkkkdrGkpaemelrs.ekkakkfGeeevaegieGleLlekwkeeekkekre......... 89 
                 mn++LLqDL++Y+kskdKg mmAA++L+sLyRev+++lL+k+drGk+a++++++ ++k+++fGee+ + +ieGleLle+wk+ee+k+kr+         
  KHJ33904.1 420 MNDTLLQDLIMYRKSKDKGTMMAAKGLLSLYREVGADLLRKRDRGKNATIGIKTgTIKERRFGEERIG-EIEGLELLEEWKREERKRKRNekglasdee 517
                 9***************************************************99**************.*******************98888887755 PP

        SDA1  90 ..eeeedsddeddeedwevesdddseedseggwidvesdeeeieesdesedeeeeeeeeeekeekeeeeeeeeeeeeeeeeeeeeeekekkkkkakeas 186
                   +++   ++++ +e+we +s +ds  d++ gw d esd e i+ s+ se+ee     ++ k++k e+ +++                           
  KHJ33904.1 518 dpDSDCTMEEAQGWENWESDS-NDS--DDSSGWKDLESDLE-IQLSE-SEEEE-----PAVKKSKVENYTTR--------------------------- 579
                 332222234556666666666.333..34467888888877.55555.33333.....22222222221111........................... PP

        SDA1 187 eeekkkeke.eekiskaselattrILTpaDFaklkelraeaavkkqlesakrkkkkkkdeee.eeaeksedlvtasdieglakkrkatkeerlasvkeg 283
                 +++++++++   k s   +latt+ILTpaD+akl+elr +a+++ +l+ ++++ k ++ + +  ++++++d+vt + iegl + rkatk+e +a +keg
  KHJ33904.1 580 DKDSEEISNnDHKTS--LNLATTQILTPADLAKLRELRLSASLNDKLHPNQKNTKLSATRLKsLSEKHEDDAVTVEAIEGLSRMRKATKDEIVALAKEG 676
                 111112222022333..459************************9999988776655555445899999*************769************** PP

        SDA1 284 redrekfgskka...kkkekelksttNkeKarkKnfqMtkhkvkskkkrslrekqkalrahlerqkkg 348
                 + +r++++s++a   +kke+++ks+tNkeK+r+Knf+Mt++k+k k+krsl++++k+l++h+er+k+g
  KHJ33904.1 677 KGERSAHKSTQAlrrQKKESQGKSSTNKEKSRQKNFLMTIGKAKFKQKRSLVQTRKVLKNHVERSKRG 744
                 **************999*************************************************96 PP

>> NUC130_3NT  NUC130/3NT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.0   0.0   1.5e-24   8.9e-21       1      52 []      69     120 ..      69     120 .. 0.99

  Alignments for each domain:
  == domain 1  score: 74.0 bits;  conditional E-value: 1.5e-24
  NUC130_3NT   1 FlaqvahcYpketkefpqeLselLlehhsvLhpdlRkklvqaLvlLRnKdiI 52 
                 F+a+va+c+p et +fp++L+++L+ hh++L+++lR+k+v++LvlL++K+iI
  KHJ33904.1  69 FVAHVADCFPTETVNFPEDLKSILELHHTELESELREKIVGSLVLLKRKEII 120
                 9*************************************************98 PP

>> Mss4  Mss4 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.5     7e-05      0.42       2      62 ..     257     317 ..     256     342 .. 0.87
   2 ?   -3.0   0.2       1.4   8.3e+03      23      41 ..     693     713 ..     678     722 .. 0.45

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 7e-05
        Mss4   2 svvlkaneakivekeeelpllekksekeeqkeselleefllvedvfdFdnvgvskevessk 62 
                 s + k+++++  + ee +++++k+++k++ ++s + ++f +++d+ +F    +sk+++++k
  KHJ33904.1 257 SSINKKRKKSKKNLEEAVKKVKKQERKKNATHSLNFSAFHFLHDPQSFAETLFSKHLQNTK 317
                 556667777778899999*****9999999999************************9984 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.4
        Mss4  23 ekk..sekeeqkeselleefl 41 
                 +k+   +++++ke+   ++fl
  KHJ33904.1 693 KKEsqGKSSTNKEKSRQKNFL 713
                 222111222222223345555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (752 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2311  (0.128897); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.78u 0.29s 00:00:01.07 Elapsed: 00:00:00.42
# Mc/sec: 5330.09
//
Query:       KHJ33905.1  [L=216]
Description: putative rab gtpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-59  199.6   0.3    2.8e-59  199.4   0.3    1.0  1  Ras          Ras family
    1.4e-36  125.3   0.3    4.2e-36  123.8   0.2    1.7  2  Roc          Ras of Complex, Roc, domain of DAPkinase
    3.4e-15   55.9   0.1    4.2e-15   55.6   0.1    1.0  1  Arf          ADP-ribosylation factor family
    4.2e-07   30.0   0.0    6.5e-07   29.4   0.0    1.3  1  MMR_HSR1     50S ribosome-binding GTPase
    1.1e-05   24.9   0.0    1.4e-05   24.6   0.0    1.1  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
    1.4e-05   24.8   0.0    2.1e-05   24.2   0.0    1.3  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    0.00022   21.2   1.3        0.2   11.6   0.1    2.3  3  RsgA_GTPase  RsgA GTPase
  ------ inclusion threshold ------
      0.014   15.8   0.1      0.023   15.1   0.1    1.5  1  AAA_16       AAA ATPase domain
      0.032   13.7   0.0      0.044   13.2   0.0    1.2  1  SBP_bac_3    Bacterial extracellular solute-binding proteins,
       0.04   14.2   0.0        1.6    9.0   0.0    2.4  2  AAA_22       AAA domain
      0.092   12.0   0.2        0.6    9.3   0.0    1.9  2  Septin       Septin


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.4   0.3   1.7e-62   2.8e-59       1     160 [.      19     183 ..      19     185 .. 0.98

  Alignments for each domain:
  == domain 1  score: 199.4 bits;  conditional E-value: 1.7e-62
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEET.TEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievd.gkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeik 98 
                 Klvl+G+savGK+sl+lrfvk++F++  esTig++f+t++i++d  ++vk+eiwDTAGqe++ksl+++yyr+a+++++vydit+++s++++k+wv+e++
  KHJ33905.1  19 KLVLLGESAVGKSSLVLRFVKNQFDDYRESTIGAAFLTQTISLDdTTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKQWVKELQ 117
                 99*****************************************95678*************************************************** PP

                 HHSTTTSEEEEEEETTTGGG....G-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras  99 rvaeenvpivLvGnKvDlee....kravsteegeelakelglkfletSAktnenveeafeellrei 160
                 r+a++n+ i+L GnK D+++    kra+st+++e++ake gl f+etSAk++env+e+f+++++++
  KHJ33905.1 118 RQANDNIIIALAGNKLDIATsnpdKRAISTADAEAYAKEAGLLFFETSAKSSENVKELFTSIAKNL 183
                 ******************999999**************************************9976 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.8   0.2   2.6e-39   4.2e-36       1     119 [.      19     134 ..      19     135 .. 0.88
   2 ?   -1.2   0.0       1.4   2.2e+03      75     104 ..     152     181 ..     144     187 .. 0.71

  Alignments for each domain:
  == domain 1  score: 123.8 bits;  conditional E-value: 2.6e-39
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEEGHHH...HCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvydsrss...enlk 96 
                 K+vl+G+s+vGK+sl+ rfv+++f++ ++stig+ flt+++ +++      ++++vk++iWDtaGqer++sl+p+y+r+a++a++vyd ++    +++k
  KHJ33905.1  19 KLVLLGESAVGKSSLVLRFVKNQFDDYRESTIGAAFLTQTI-SLD------DTTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAsslDKAK 110
                 99***********************************9987.333......346799*******************************55431236889 PP

                 HHHHHHHHHCSSS-EE.EEEE-TT CS
         Roc  97 eWlkelkkvagkspvi.lvgnkiD 119
                 +W+kel+++a+++++i l gnk+D
  KHJ33905.1 111 QWVKELQRQANDNIIIaLAGNKLD 134
                 *********99887664899**99 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.4
                 HHHCTSCEEEEEEEGHHHHCHHHHHHHHHH CS
         Roc  75 lylreaalailvydsrssenlkeWlkelkk 104
                  y +ea l+++ + ++ssen+ke ++++ k
  KHJ33905.1 152 AYAKEAGLLFFETSAKSSENVKELFTSIAK 181
                 566666666666667888899888777766 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.6   0.1   2.6e-18   4.2e-15      13     174 ..      16     182 ..       9     183 .. 0.87

  Alignments for each domain:
  == domain 1  score: 55.6 bits;  conditional E-value: 2.6e-18
                 TEEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSS..EEEEEEEE...TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHH CS
         Arf  13 kelrilllGLDnaGKtTilkklkleelvt.tvPTig..fnveelei...knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLk 105
                  +++++llG  + GK+ ++ ++ ++++++    Tig  f +++++     ++kf++wD  Gqe+ ++l   Y+++ +  + v D ++ + l++ak+ +k
  KHJ33905.1  16 AQFKLVLLGESAVGKSSLVLRFVKNQFDDyRESTIGaaFLTQTISLddtTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKQWVK 114
                 679********************99999856788883355677766666789*********************************************99 PP

                 HHCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHHHHHHHH CS
         Arf 106 alleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewlses 174
                 +l +++ + ++++ + +NK D++++  ++   ++ + e   ++  l  +++sa + e++ke ++ ++++
  KHJ33905.1 115 EL-QRQANDNIIIALAGNKLDIATSNPDKRAISTADAEAYAKEAGLLFFETSAKSSENVKELFTSIAKN 182
                 97.677899999999*******99998877777777777777999****************99998876 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0     4e-10   6.5e-07       2     112 ..      20     128 ..      19     132 .. 0.76

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 4e-10
                 EEEEESTTSSHHHHHHHHHTS.....TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETTTTCSHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge.....kaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflaleeadlillvvdaseeklkplde 95 
                  +++G + vGKS+L+ + +++     +  +   ++ T++i     +    ++e++Dt+G  e   + k+l+  + ++ ++ ++++ +  + ++l++ ++
  KHJ33905.1  20 LVLLGESAVGKSSLVLRFVKNqfddyRESTIGAAFLTQTISLDDTT--TVKFEIWDTAG-QE---RYKSLAPMYYRNANCAVVVYDITQA-SSLDKAKQ 111
                 6899***************964544556667778999999888887..689********.54...5558888888777766666666533.46888889 PP

                 HHHHHHHHTTSEEEEEE CS
    MMR_HSR1  96 eleelleeakkplilvl 112
                  ++el+++a++++i++l
  KHJ33905.1 112 WVKELQRQANDNIIIAL 128
                 99999888888888765 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   8.3e-09   1.4e-05       1     145 [.      19     157 ..      19     187 .. 0.60

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 8.3e-09
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsii....FdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedl 95 
                 k++L+G+s  GK+s+        Fd y      ++ga+  ++  ++  +  +++++wD  Gqe++   +        +rn +  + V D++     ++l
  KHJ33905.1  19 KLVLLGESAVGKSSLVLRFvknqFDDYRES---TIGAAFLTQTISLDDTTTVKFEIWDTAGQERYKSLA-----PMYYRNANCAVVVYDIT---QASSL 106
                 899***********9644311114444433...3444444444444445569***********997775.....44455555555556998...45566 PP

   Gtr1_RagA  96 etlkeileal.rqyspeakvfvlihKmDliqedereeifeerkeeireeie 145
                 ++ k+ +++l rq + ++ +    +K+D  +++  ++++++  +e   + +
  KHJ33905.1 107 DKAKQWVKELqRQANDNIIIALAGNKLDIATSNPDKRAISTADAEAYAKEA 157
                 6666666666246778888888889***99876666655555444444333 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   1.3e-08   2.1e-05      53     193 ..      51     184 ..      25     185 .. 0.75

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 1.3e-08
                 TSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB.....STHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHH CS
    GTP_EFTU  53 giTiksaaisleketkkylinliDtPGHvdFskevirglrvlDgavlvvdaveG.....vepqteevlrlalkegvpiivfiNKmDrlkaelkeiveev 146
                 g    +++isl+ +t++ ++ + Dt G + + +     +r +++av+v d+++       ++  +e+ r+a + ++ i ++ NK+D + ++ ++ +   
  KHJ33905.1  51 GAAFLTQTISLD-DTTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAssldkAKQWVKELQRQA-NDNIIIALAGNKLDIATSNPDKRAIST 147
                 444445566666.9**************************************8854442333333333333.3455577777******99988766655 PP

                 HHHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTBTHHHHHHHHHHHSH CS
    GTP_EFTU 147 kqklsrkeeklekygekgekevpvvfgSalkgegvktllealvellp 193
                  +         e+y+ ++     ++ +Sa++ e+vk+l+  + ++lp
  KHJ33905.1 148 AD--------AEAYAKEA--GLLFFETSAKSSENVKELFTSIAKNLP 184
                 52........33444443..588999************999998887 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.1   0.00012       0.2     101     122 ..      19      40 ..       9      65 .. 0.82
   2 ?    0.7   0.0      0.26   4.2e+02      68      99 ..      84     115 ..      54     120 .. 0.72
   3 !    8.4   0.2    0.0012       1.9       4     100 ..      79     182 ..      76     185 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00012
                  EEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 101 tsvlvGqSGvGKStLinallpe 122
                    vl+G+S vGKS+L+ +++ +
   KHJ33905.1  19 KLVLLGESAVGKSSLVLRFVKN 40 
                  579************9887765 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.26
                  HHHHHHHTTSEEEE--TTTHTTHHHHHHHCTT CS
  RsgA_GTPase  68 lkeelealgyevllvsaktkegleelkellkd 99 
                      +++++++v++ + ++ ++l++ k+++k+
   KHJ33905.1  84 APMYYRNANCAVVVYDITQASSLDKAKQWVKE 115
                  34568999999999999999999999998876 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.0012
                  -S-EETTTTEES--EEEEEEESTTTT--HHHHH...HHHHHHHHTT-EEEEEEE-GGG--HHH.....HHHHHHHHHHHTTSEEEE--TTTHTTHHHH CS
  RsgA_GTPase   4 RknelvrpkvaNvdqllivvslkepelslnlld...rfLvlaeekgiepvivlnKiDlleeee.....eleelkeelealgyevllvsaktkegleel 93 
                  R ++l      N + +++v  ++ +  sl+  +   + L    + +i + ++ nK+D+++++      ++ + ++  +++g+ ++ +sak++e+++el
   KHJ33905.1  79 RYKSLAPMYYRNANCAVVVYDIT-QASSLDKAKqwvKELQRQANDNIIIALAGNKLDIATSNPdkraiSTADAEAYAKEAGLLFFETSAKSSENVKEL 175
                  55566666666778888888887.444444444000445555566666777779****9998877876666777778999*****************9 PP

                  HHHCTTS CS
  RsgA_GTPase  94 kellkdk 100
                   + ++++
   KHJ33905.1 176 FTSIAKN 182
                  9988765 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.1   1.4e-05     0.023      27     106 ..      20      81 ..      14     191 .. 0.55

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.4e-05
      AAA_16  27 vllsGesGvGKsslvrellralekd......ggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleeala 106
                 ++l Ges+vGKsslv ++ +   +d      g+ fl+++                            ++++ ++e w+++ +e+++
  KHJ33905.1  20 LVLLGESAVGKSSLVLRFVKNQFDDyrestiGAAFLTQTISLD------------------------DTTTVKFEIWDTAGQERYK 81 
                 5799***********6666533333344455444433333333........................2222233333333333333 PP

>> SBP_bac_3  Bacterial extracellular solute-binding proteins, family 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.7e-05     0.044       8      65 ..      82     139 ..      80     181 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.7e-05
                 -BTTTBEE-TTS-EESHHHHHHHHHHHHCT-EEEEEE-SGGGHHHHHHTTSSSEEESS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   SBP_bac_3   8 dypPfsykdengeltGfdvdlakaiakrlgvkvefvpvswdelipalksgkvDiaiaa 65 
                 + +P+ y+++n  ++ +d+  a  + k  ++  e++++  d++i al+ +k+Dia ++
  KHJ33905.1  82 SLAPMYYRNANCAVVVYDITQASSLDKAKQWVKELQRQANDNIIIALAGNKLDIATSN 139
                 679****************************99*****99**************9864 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0   0.00098       1.6       8      38 ..      20      62 ..      16     137 .. 0.71
   2 ?    3.0   0.0     0.071   1.2e+02      28      73 ..     147     191 ..     141     210 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00098
      AAA_22  8 lvvtGesGtGKTtll.rrlleqldeeakaee...........e 38
                lv+ Ges +GK+ l+ r +++q+d + + +             
  KHJ33905.1 20 LVLLGESAVGKSSLVlRFVKNQFDDYRESTIgaafltqtislD 62
                6899*******87651556667766655554655555555554 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.071
      AAA_22  28 qldeeakaeeerpevvfvtlpsstsskdllrellralglelkaerl 73 
                 ++d+ea+a+e++  +++  ++ss++ k+l++ ++++l l++ +   
  KHJ33905.1 147 TADAEAYAKEAGLLFFETSAKSSENVKELFTSIAKNLPLNQAG-SR 191
                 555555555555555566666677*************998877.33 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00037       0.6       4      49 ..      17      62 ..      14      77 .. 0.71
   2 ?    0.5   0.0      0.18   2.9e+02     144     212 ..     124     193 ..     104     205 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00037
                EEEEEEEEBTTSSCCCCCCTTSSSS------------------S-E CS
      Septin  4 eftlmvvGesglGkttlintlfetdlieeekleeasekkkktveik 49
                +f l++ Ges++Gk++l+  +++++  + ++ +  +   ++t++++
  KHJ33905.1 17 QFKLVLLGESAVGKSSLVLRFVKNQFDDYRESTIGAAFLTQTISLD 62
                89******************99998877765444444444444444 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.18
                 EEEEES..SGGGS-HHHHHHHHHHHHHHHHHTT--------SSSS-SCCHHHHHHHHHHC-SEEB-SSSSE CS
      Septin 144 liPvia..KaDtltkeElkefKkkireeleeeeikiyklpdeeededeeakelseklkeslPfaivgsnel 212
                 +i  +a  K D+ t++  k+  ++  +e  ++e  +   +++++++ e++kel  ++ ++lP    gs++ 
  KHJ33905.1 124 IIIALAgnKLDIATSNPDKRAISTADAEAYAKEAGLLF-FETSAKSSENVKELFTSIAKNLPLNQAGSRNP 193
                 44444334556666666666666666666666666665.77788888899999999999999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       617  (0.0344135); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 1643.98
//
Query:       KHJ33906.1  [L=954]
Description: putative isoleucyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   7.6e-157  523.2   0.0   1.1e-156  522.6   0.0    1.2  1  tRNA-synt_1    tRNA synthetases class I (I, L, M and V)
    1.3e-21   76.8   0.0    2.5e-14   52.9   0.0    3.9  3  tRNA-synt_1g   tRNA synthetases class I (M)
    4.1e-21   75.5   0.0    1.3e-20   73.9   0.0    1.8  2  Anticodon_1    Anticodon-binding domain of tRNA
  ------ inclusion threshold ------
      0.019   14.5   0.0      0.046   13.2   0.0    1.6  1  tRNA-synt_1_2  Leucyl-tRNA synthetase, Domain 2
       0.04   13.2   0.0        7.7    5.8   0.0    2.4  2  tRNA-synt_1e   tRNA synthetases class I (C) catalytic domain
       0.15   12.0   6.7        0.5   10.3   6.8    2.0  1  zf-FPG_IleRS   Zinc finger found in FPG and IleRS


Domain annotation for each model (and alignments):
>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  522.6   0.0  3.7e-160  1.1e-156       9     599 ..      49     669 ..      42     672 .. 0.91

  Alignments for each domain:
  == domain 1  score: 522.6 bits;  conditional E-value: 3.7e-160
  tRNA-synt_1   9 edvfkkelekekekkefilvdgPPyvtGslHiGhalaktlkdivirykrmkGkevlyvpGwDhaGlaieak.vekklgakekkerkklgreefrekvr 105
                  +d+++ ++++++ + +f l dgPPy++G lHiGhal+k+lkdi++r + ++Gk+v yvpGwD++Gl+ie k +e++   +   +   +   ++r+  r
   KHJ33906.1  49 DDLYEWQTKERDGHSTFLLNDGPPYANGDLHIGHALNKILKDIICRRRVQQGKKVIYVPGWDCHGLPIEIKaLERQRISDT--SDGVYDSIKIRKAAR 144
                  7899999999999********************************************************862666644444..455677899****** PP

  tRNA-synt_1 106 ewkaeyaeeirkqvkrlGvsvDfdreylTldkeleeavkevfvrladkgliyrgkklvnwstklktalselEveyk.dkkdalihvafpladkee... 199
                  e ++e ++++ k++++ G+++D+ +  +T+dk++e  + ++f  l+ kgli+r+ k+v+ws++++tal+e+E eyk d+ +++ +v+fp+++  +   
   KHJ33906.1 145 ELASETVKSQMKNFREWGIMADWAKSWKTMDKSYEIKQLRIFQSLVRKGLIFRRFKPVYWSPSSRTALAEAELEYKtDHCSTAAYVKFPISKMPDilk 242
                  **************************************************************************9846678999******55555555 PP

  tRNA-synt_1 200 ........vklviaTTtPeTllgdtavavnpeldyv...itkeklilaeallkslvkkesek...kiledergkeLegkevelpl.vnrkipiiaddy 282
                             + +TTtP+Tl++++a+av  el+y+    + e li+a++++++++k  +ek    i + + g++L+g  +++ +   +++pii+ ++
   KHJ33906.1 243 nnlqfsgkLFAITWTTTPWTLPANRAIAVYSELEYSivnYNSEFLIIAKNRVEEVMKLFTEKpleIIIDSILGRDLKGALYTHIFgGSTQFPIIEAEF 340
                  5666776678899**********************98888999***************98887856789999*************55689******** PP

  tRNA-synt_1 283 vdkeaGtGvVkiaPahdedDyevgkkynlevinildedgtlteea.....aefeglkv.fdarkkvveelkekglllkaekiehsvpfcerskkpiiy 374
                  v++++G+G+V++aP+h++dDyev+++ +++   +++++g++t +a     +  eg +v  d   +v+e lk++   l ++k +h++p+++r+k p+i 
   KHJ33906.1 341 VTSDSGSGLVHVAPGHGQDDYEVCTRLGIQASAPVNDSGCFTADAfpensSSLEGKSVlHDGAAQVLELLKQN--VLITHKYKHKYPYDWRTKLPVII 436
                  *******************************************999999999999887357788888888877..55567899*************** PP

  tRNA-synt_1 375 rateqWfvrvkeladaalkavekvqfvpkskekryaswleniqdWciSRqrwWGhriplfvsketeevvvreelkelvagreeeeaekkalekeakdk 472
                  rateqWf  v +++++a++ ++ v f+p+s+++r +s+++ +++Wc+SRqr WG++ip+ ++++   +  ++e  e+v +   +++ +++++++ ++ 
   KHJ33906.1 437 RATEQWFADVGSIKNDAIECLKAVDFIPESGRARLESFIKARSEWCVSRQRAWGVPIPALYQENGTAIL-TDESIEHVISVICKRGIDAWWTDSPEEP 533
                  ****************************************************************88555.588888888899**********999988 PP

  tRNA-synt_1 473 l...kkekgelekdedvlDvWFsSgswpfstlgypeedteelkkffpadmlleGlDiirgWvarlillslaltgse..PfkevlvhglvrdeeGrKmS 565
                         +g++++ +d++DvWF+Sg +  s+++  e+          ad++leG D++rgW+++++l+ +   g++  Pfk +l+hg+ +d+ GrKmS
   KHJ33906.1 534 AwipPWLEGSFRRGKDTMDVWFDSGTS-WSQMN--EQ----------ADVYLEGTDQHRGWFQSSLLTFVGGSGKKgaPFKALLTHGFALDQAGRKMS 618
                  77777889*****************65.56666..23..........89***************99877766666555******************** PP

  tRNA-synt_1 566 KslgNvidpldvik.................kygadalRltlilsdvgrdi 599
                  Ks+gNvi+p+++i+                 ++g+d lRl++++ d +rd+
   KHJ33906.1 619 KSIGNVISPNQIIDcsllppvkkkkgplvsqTLGVDTLRLWVASCDFTRDV 669
                  ***********************************************9997 PP

>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.9   0.0   8.3e-18   2.5e-14       7     144 ..      71     226 ..      65     236 .. 0.81
   2 !   11.0   0.0   4.3e-05      0.13     177     239 ..     435     498 ..     429     527 .. 0.86
   3 !    7.2   0.0    0.0006       1.8     313     343 ..     601     632 ..     574     637 .. 0.85

  Alignments for each domain:
  == domain 1  score: 52.9 bits;  conditional E-value: 8.3e-18
                   -B--SS---HHHHHHHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHHHHHTT................S-HHHHHHHHHHHHHHHHHHTT---SE CS
  tRNA-synt_1g   7 lpYangklHlGhllevisaDifaRykrlrgeevlfvcgtDehGtpielkAekeg................vtpeelvekvheeikelfkklnisfdk 87 
                    pYang+lH+Gh+l+ i  Di++R + ++g++v++v g D hG pie+kA +++                  ++el++++ +++ + f++++i  d 
    KHJ33906.1  71 PPYANGDLHIGHALNKILKDIICRRRVQQGKKVIYVPGWDCHGLPIEIKALERQrisdtsdgvydsikirKAARELASETVKSQMKNFREWGIMADW 167
                   59************************************************87642222222222222211357899999999999********9996 PP

                   EEE..TTSHHHHHHHHHHHHHHHHTT-EEEEEEEEEEETTTTEEE-GGG-EE....... CS
  tRNA-synt_1g  88 ygr..ttseehkelvqeifkklkekgliyekeieqlycpkderflpdryvegtCPkcks 144
                    ++  t +++ +    +if+ l +kgli ++   ++++p+  + l++ ++e +  +c +
    KHJ33906.1 168 AKSwkTMDKSYEIKQLRIFQSLVRKGLIFRRFKPVYWSPSSRTALAEAELEYKTDHCST 226
                   65411555555555568*********************************999999975 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 4.3e-05
                   EEE.EEEEEE-GGGGHHHHHHHH.HH-TTSHHHHHHHH.HHHHT----EE-ESS-SSS-EET...T CS
  tRNA-synt_1g 177 evketehlffklskfekklkewieeeekeleenvkkivkewlkegLkdlaisrdldwGipvP...g 239
                   +++ te++f ++ +++++  e + +     +e+ +  +++++k+  +++++sr+  wG+p+P   +
    KHJ33906.1 435 IIRATEQWFADVGSIKNDAIECL-KAVDFIPESGRARLESFIKA-RSEWCVSRQRAWGVPIPalyQ 498
                   5789999*********9999999.66667999999999999999.89***************6532 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0006
                   S-EEEE--.EEE--------------HHHHHH CS
  tRNA-synt_1g 313 kkvvahey.ltvegkKlSkSrgvvvkakeale 343
                   k++ +h++ l   g+K+SkS g+v+ ++++++
    KHJ33906.1 601 KALLTHGFaLDQAGRKMSKSIGNVISPNQIID 632
                   6788889856789***************9987 PP

>> Anticodon_1  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.8   5.5e+03     104     140 ..     382     424 ..     376     435 .. 0.67
   2 !   73.9   0.0   4.4e-24   1.3e-20       1     144 [.     710     850 ..     710     863 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.8
  Anticodon_1 104 lae.wpekaeelekel..e...eeevellkeivkairklrsel 140
                   a+ +pe+++ le++   +    + +ellk+ v +  k++ ++
   KHJ33906.1 382 TADaFPENSSSLEGKSvlHdgaAQVLELLKQNVLITHKYKHKY 424
                  4555998554553333343466789999999999999888776 PP

  == domain 2  score: 73.9 bits;  conditional E-value: 4.4e-24
  Anticodon_1   1 drwilselnklvkevteayeeyrfnkaasalyeffwndlcdwylelvkprlysesaedkraaqevllevletllrllaPfmPfitEelwqreeeelgk 98 
                  d+ +l++l+ + +ev+ +y++y+f+++++a+ +++  +l+++yle++k+rly+ ++       +vl+++++ +lr+l P++P + Ee+w ++ e ++ 
   KHJ33906.1 710 DQIALTQLEMVMAEVESSYNKYEFYQVVKAINKWVNTELSSFYLEAIKDRLYCGDG------GSVLADIFHGFLRMLTPITPLLVEEAWSHRPEWMKA 801
                  78899************************************************987......68*************************996666777 PP

  Anticodon_1  99 kesimlaewpe.kaeel..ekele.....eeevellkeivkairklrselkikp 144
                    +++ +   + k++    +  ++     ++++ +   +++a+r+++  ++ ++
   KHJ33906.1 802 RGDVHPCYVTQpKPSMVadD--IDfqssiKSDIPW---LMNAARAIKVAQEQAR 850
                  77786665543233232321..2133455677777...7888888887666555 PP

>> tRNA-synt_1_2  Leucyl-tRNA synthetase, Domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.5e-05     0.046      95     140 ..     330     375 ..     318     407 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.5e-05
  tRNA-synt_1_2  95 gekipiwvanyvlmeygtgavmavPahdqrDfeFakkynlpikqvi 140
                    +++ pi  a++v ++ g+g v   P+h q D+e  ++ +++    +
     KHJ33906.1 330 STQFPIIEAEFVTSDSGSGLVHVAPGHGQDDYEVCTRLGIQASAPV 375
                    5689*****************************9999988876655 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0    0.0026       7.7      21      52 ..      76     107 ..      70     218 .. 0.79
   2 ?    4.9   0.0    0.0047        14     241     268 ..     604     631 ..     522     634 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0026
                   S--BHHHHHHHHHHHHHHHHHHHTT-EEEEEE CS
  tRNA-synt_1e  21 dashlGhaRslvafDilrrilqalgYdvqfvq 52 
                    + h+Gha + +  Di+ r   ++g +v +v 
    KHJ33906.1  76 GDLHIGHALNKILKDIICRRRVQQGKKVIYVP 107
                   579*************9888888999999995 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0047
                   EEEE--EEETTBE--TTTT---BHHHHH CS
  tRNA-synt_1e 241 flhnghlkiegekmsksLknfitikdvl 268
                     h   l   g+kmsks++n+i+ ++++
    KHJ33906.1 604 LTHGFALDQAGRKMSKSIGNVISPNQII 631
                   45556678889**********9877765 PP

>> zf-FPG_IleRS  Zinc finger found in FPG and IleRS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   6.8   0.00017       0.5       2      14 ..     924     936 ..     923     947 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00017
                   SB-TTT--BBEEE CS
  zf-FPG_IleRS   2 epCpRCwryierv 14 
                   e+CpRCwry++ +
    KHJ33906.1 924 EKCPRCWRYVAPE 936
                   9********8755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (954 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       507  (0.0282782); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.74u 0.25s 00:00:00.99 Elapsed: 00:00:00.46
# Mc/sec: 6260.16
//
Query:       KHJ33907.1  [L=195]
Description: putative orf21 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0039   17.0   4.2     0.0039   17.0   4.2    2.2  2  zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.019   15.1   6.4      0.034   14.3   4.1    2.3  2  FYVE        FYVE zinc finger
       0.14   12.2   7.7       0.33   11.0   7.7    1.7  1  zf-RING_5   zinc-RING finger domain
        2.3    8.4  13.8       0.17   12.1   3.7    2.7  3  zf-B_box    B-box zinc finger
        6.8    7.1  12.1          2    8.8   8.1    2.1  2  C6_DPF      Cysteine-rich domain
          8    6.7  12.2         29    4.9  12.2    1.9  1  FYVE_2      FYVE-type zinc finger
          9    6.6  12.9        4.6    7.6   8.1    2.5  2  IBR         IBR domain, a half RING-finger domain


Domain annotation for each model (and alignments):
>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.36   9.1e+02      18      30 ..     134     146 ..     127     154 .. 0.71
   2 !   17.0   4.2   1.5e-06    0.0039      12      44 ..     160     191 ..     157     195 .] 0.89

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.36
                 TTEEEEEE-HHHH CS
  zf-C3HC4_3  18 lpCgHlvlCeeCa 30 
                 l C   v Ce+C 
  KHJ33907.1 134 LLCLQKVNCEDCD 146
                 5566667788885 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 1.5e-06
                 BS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT- CS
  zf-C3HC4_3  12 prnvvllpCgHlvlCeeCaekllkrkkkCpiCr 44 
                 + + ++  Cg   +C++C+ +++++++kC iC 
  KHJ33907.1 160 EDDYTCATCGKY-VCQSCSISYMDMERKCLICV 191
                 56788999**99.*******************5 PP

>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.25   6.4e+02      20      46 ..      40      66 ..      21     126 .. 0.72
   2 ?   14.3   4.1   1.3e-05     0.034      11      44 ..     141     181 ..     135     193 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.25
                -SSS--EE-TTT--EE-STTS-EEE.E CS
        FYVE 20 sllrrrhhCrlCGkvvCekCssklval 46
                 + +r    r C +vv e+  s l+++
  KHJ33907.1 40 RTRKRHRNSRPCDSVVYERTLSLLYSA 66
                444455567788877776555544444 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 1.3e-05
                 B-TTT--B--S.......SS--EE-TTT--EE-STTS-EEE CS
        FYVE  11 kCeiCakkFsl.......lrrrhhCrlCGkvvCekCssklv 44 
                 +Ce C+ + ++        +  + C +CGk vC++Cs + +
  KHJ33907.1 141 NCEDCDVPLNIeesaidiREDDYTCATCGKYVCQSCSISYM 181
                 799999999854444432577799************97666 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   7.7   0.00013      0.33       2      42 ..     142     190 ..     136     192 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00013
   zf-RING_5   2 CnkCfekl........skeekfyltsCgHifCekClkkllekeavCpiC 42 
                 C  C  +l          e+++   +Cg ++C++C   ++  e++C iC
  KHJ33907.1 142 CEDCDVPLnieesaidIREDDYTCATCGKYVCQSCSISYMDMERKCLIC 190
                 777777777766666666777**************************** PP

>> zf-B_box  B-box zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.2     0.044   1.1e+02      16      25 ..     140     149 ..     137     149 .. 0.78
   2 ?   12.1   3.7   6.5e-05      0.17      16      31 ..     163     178 ..     160     180 .. 0.89
   3 ?   -3.1   0.1       3.8   9.6e+03       5       9 ..     186     190 ..     183     194 .. 0.55

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.044
    zf-B_box  16 lfCedCqqpl 25 
                   CedC++pl
  KHJ33907.1 140 VNCEDCDVPL 149
                 5699999886 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 6.5e-05
    zf-B_box  16 lfCedCqqplCeeCst 31 
                 + C +C++++C++Cs 
  KHJ33907.1 163 YTCATCGKYVCQSCSI 178
                 78************64 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 3.8
    zf-B_box   5 kCpeH 9  
                 kC ++
  KHJ33907.1 186 KCLIC 190
                 45444 PP

>> C6_DPF  Cysteine-rich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       1.4   3.7e+03      56      61 ..     136     141 ..     107     155 .. 0.58
   2 ?    8.8   8.1   0.00078         2      52      82 ..     164     194 ..     161     195 .] 0.82

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.4
      C6_DPF  56 CekavC 61 
                 C ++v 
  KHJ33907.1 136 CLQKVN 141
                 333332 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00078
      C6_DPF  52 kCslCekavCvdeeCslfy..tkrfClkCvkee 82 
                 +C++C+k vC +  Cs+ y  ++r Cl Cv ++
  KHJ33907.1 164 TCATCGKYVCQS--CSISYmdMERKCLICVDKK 194
                 6*********88..77777225799****9876 PP

>> FYVE_2  FYVE-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9  12.2     0.011        29      51      97 ..     136     190 ..     122     195 .] 0.68

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.011
      FYVE_2  51 klgethCilCleefkllvnsk......rqCldCklnvCkkCsve..nkkekvwlC 97 
                 +l++ +C  C  ++++  +         +C  C ++vC++Cs++  + ++k  +C
  KHJ33907.1 136 CLQKVNCEDCDVPLNIEESAIdireddYTCATCGKYVCQSCSISymDMERKCLIC 190
                 56677777777777765443222222379************99865666666666 PP

>> IBR  IBR domain, a half RING-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.23   5.8e+02      11      24 ..      25      38 ..      18      53 .. 0.75
   2 ?    7.6   8.1    0.0018       4.6      17      56 ..     138     180 ..     122     190 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.23
         IBR 11 slesdpnlkwCprp 24
                + + +++++wC  p
  KHJ33907.1 25 TSSVSQSTTWCLHP 38
                44447789999876 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0018
         IBR  17 nlkwCprpdCeaiiekseg.....cksvtCskCgfefCfnCkkew 56 
                 ++++C   dC+ ++  +e+     +++ tC++Cg+  C +C  ++
  KHJ33907.1 138 QKVNCE--DCDVPLNIEESaidirEDDYTCATCGKYVCQSCSISY 180
                 478998..9**99977777666665558*************8766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       915  (0.0510346); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1423.26
//
Query:       KHJ33908.1  [L=520]
Description: putative upf0183 domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-59  202.5   0.0    1.3e-36  126.8   0.0    3.2  3  UPF0183   Uncharacterised protein family (UPF0183)


Domain annotation for each model (and alignments):
>> UPF0183  Uncharacterised protein family (UPF0183)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.8   0.0     7e-41   1.3e-36       5     253 ..      17     283 ..      13     293 .. 0.75
   2 !   11.6   0.1   6.8e-06      0.12     256     279 ..     324     347 ..     312     351 .. 0.82
   3 !   60.1   0.0   1.2e-20   2.2e-16     285     390 .]     382     520 .]     375     520 .] 0.79

  Alignments for each domain:
  == domain 1  score: 126.8 bits;  conditional E-value: 7e-41
     UPF0183   5 fvlGmplsqaiailksqestikkvellYsdkeplkvdivinlkedgirLiFdpvsQrLklIevydlkkvkLkYagk...vfnspsvkatieq....... 93 
                 +vlG++l++++  lk + ++++k++l++++++plk ++++ l+++g+rL+Fd+ +QrL+lIev d++k +LkY++k    f+  +++  i++       
  KHJ33908.1  17 IVLGSTLHNVLTRLKAEPRKFPKIDLIFNQSSPLKEPVILGLPDNGLRLRFDGPEQRLRLIEVLDFAKSHLKYKDKdlvRFSALNQSGPIQNggqsaps 115
                 89***********************************************************************99722246666666666666677777 PP

     UPF0183  94 ...i.enlfGaTypgey.......daekklyvlsyrGlsfefpiesevkslvskaekefgllslefpkgaspvvskviiydgsslkkakaPslPsscyk 181
                    i ++l+G+T+pgey       +++  +yvlsy+G++f+fp+++++ s +++        sl  ++ +s+ +s+++i++g+s ++ +        ++
  KHJ33908.1 116 frhIyNRLLGPTFPGEYvepitedKTDVGTYVLSYPGIAFSFPLQKSNWSPEKD------FVSL-LSSATSQYASSMAIFHGKSWSDCRDSL-----FT 202
                 777615699******994433332234579**************9955444333......4455.445667799*********999655444.....44 PP

     UPF0183 182 kqlylee...vevlldeektkglklvlvte.....eepkkstlkreikfg.dstqdvlseLGapskvfyksedkmkIHsps 253
                 +++ ++    v+ + +e+  +++kl  ++         ++   +  i++g  s+qd +++LG+p+ +f k++ +m+IH+ +
  KHJ33908.1 203 SHIDIRDlfsVSSKDREQLRDEVKLIRIYGegqieLLRSEGIPAFWINLGlTSPQDLILNLGPPDAIFRKNDHRMSIHKCP 283
                 444444310033333344347888776666576532223333456799994467************************865 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 6.8e-06
     UPF0183 256 ralatkrsdyFynYftlGldiLfd 279
                 + +++ ++++FynYf  G+diL  
  KHJ33908.1 324 EVVESVTGECFYNYFYQGFDILLS 347
                 45568899**************86 PP

  == domain 3  score: 60.1 bits;  conditional E-value: 1.2e-20
     UPF0183 285 vkkfiLhtNlPghvnFniykrCefklvlsskakkekseeeektitaetkwdevkkalvka.s............ekpvvlnras..stntt........ 360
                   k+iLh N+Pg+++Fn+  rC++++   + +        +++i++e++++e++k+l+++ +            ++ +vlnr    s            
  KHJ33908.1 382 ATKLILHGNAPGSYTFNRHRRCRWEIKYLEPKFG------QDIIHSESPFHEIEKRLQEEwKsmyrnseeerayQRGMVLNRDWgdS---Lgsscellg 471
                 57************************97776643......459**************888536899999999995556666555222...233456666 PP

     UPF0183 361 ...................npfgstfiygyqdvifEvmkngaiasvtly 390
                                    +  g+t+ yg+++++fEvmkng++  +t++
  KHJ33908.1 472 greeyinykktdppdaddiKGLGNTNLYGFPGLVFEVMKNGFVSGLTIF 520
                 666666666666666666699*************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3569.06
//
Query:       KHJ33909.1  [L=694]
Description: putative phosphoinositide phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-86  289.6   0.2    4.1e-86  289.2   0.2    1.1  1  Syja_N    SacI homology domain


Domain annotation for each model (and alignments):
>> Syja_N  SacI homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  289.2   0.2   2.3e-90   4.1e-86       2     320 .]      57     401 ..      56     401 .. 0.91

  Alignments for each domain:
  == domain 1  score: 289.2 bits;  conditional E-value: 2.3e-90
      Syja_N   2 gilGlirllsgsyllvitkreevgtlkgkkeiykitevellplsseeeaekalkslkaktekkkeekeleekllklleklfessgsfYFsydlDltrsl 100
                 gilG+i+l+ ++y++v+t+ e+ g lkg+ +iy+++++e+lpl++      +l             +++e+++l+ll ++f + + +YFsy++Dlt+++
  KHJ33909.1  57 GILGIIKLRLDKYIIVVTRVEKAGILKGH-SIYQVKATEVLPLRER-----TLY------------DQDEDTYLALL-RNFLKLEPMYFSYTFDLTNTF 136
                 9********99***************876.************9433.....333............335899**999.8999999************** PP

      Syja_N 101 qrqlekssesskslplweraderFvWNrhllkpli........ea.....eldswllpviqGfveqsklklsksqkekekkevtltlisRrsrkraGtR 186
                 qrq++     ++s plw+rad+rF+WN++++++li        ++     ++d ++lpvi+G+++   ++        +++ +tl+li+R+sr+  GtR
  KHJ33909.1 137 QRQSQL----DSSIPLWKRADDRFFWNKFVQTSLIdfrtsgnrQQpgqqpGVDPYILPVIYGMLRIVPTQI-------KSTPLTLVLITRKSRHMVGTR 224
                 ***986....79999******************99888887761155567**************5444433.......34679**************** PP

      Syja_N 187 ylrRGiddeGnvANfvEtEqileves.....................sekeskilSfvqiRGSiPlfWsqeptlkykpkirierseeenleafkkHfek 264
                 y++RGid++Gn++Nf EtEqi+  ++                     s ke kilS+vq+RGS+P+fW++ ++l y+pk+++ rs e++ +a+++Hfe+
  KHJ33909.1 225 YFSRGIDEKGNASNFNETEQIVILNDspstldgfggeknfkdrnigdSRKELKILSYVQTRGSVPVFWTEVNNLFYTPKLQV-RSVEAAVSAARAHFEE 322
                 ***********************7778*******************988899******************************.6*************** PP

      Syja_N 265 llkrYgkvvvvnLlekkgrEkkLgeayekavkklnkle.......................kekkklkyveFDfhkeck 320
                 +++ Yg++ +vnL++++grE+++++ayek+v+ l++++                       +  ++l+y++FD+h e+k
  KHJ33909.1 323 QVRLYGDIFLVNLVKHSGREQAIKDAYEKMVNLLTSKPvdvlgqdsfideksrnvepinyrQIMDHLHYIYFDYHTETK 401
                 **********************************974479*********************8889***********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (694 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4878.43
//
Query:       KHJ33910.1  [L=568]
Description: putative threonine ammonia-lyase precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-77  260.7   0.2    2.1e-77  260.5   0.2    1.1  1  PALP            Pyridoxal-phosphate dependent enzyme
      4e-40  135.5   0.0    3.3e-20   71.7   0.0    2.4  2  Thr_dehydrat_C  C-terminal regulatory domain of Threonine deh


Domain annotation for each model (and alignments):
>> PALP  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  260.5   0.2   2.3e-81   2.1e-77       5     276 ..      75     347 ..      71     366 .. 0.96

  Alignments for each domain:
  == domain 1  score: 260.5 bits;  conditional E-value: 2.3e-81
                 SSS--EEEECCTCCCCCCEEEEEEGGGSTTSBTTHHHHHHHHHHHHTTTTTSEEEEEBSSHHHHHHHHHHHHHT-EEEEEEETTS-HHHHHHHHHTT-E CS
        PALP   5 igpTPlvrlprlskelgvplflKlEslnptgSfKdRgaeyllarlkegtgaktvveassGNhgralAaaaallGlkvtivvpadaspekvallrllGae 103
                 + +TPl ++ +ls +l +++flK+E+l+p  SfK+Rga++ +a+l ++ + k+v+++s+GNh++++A+ a++l++++t+v+p+ +++ k +   ++Ga+
  KHJ33910.1  75 VDETPLTHAVNLSNRLECKIFLKREDLHPVFSFKLRGAYNKMAHLNPEVSWKGVIACSAGNHAQGVAYSARKLKIPATLVMPEATPSIKHLNVSRMGAT 173
                 678************************************************************************************************ PP

                 EEEECCHHHHHHHHHHHHHHHSTTCEE--TTTSHHHHHHHHTHHHHHHHHTT.TTEEEEEEE-SSSHHHHHHHHHHHHHSTT-EEEEEEECTTCGGTTC CS
        PALP 104 vvevggdydeavaaaaelaaegegaylvsqfdnptviegygtiglEileqlg.gkpdavvvpvGgGgliaGiaaglkerrpdvrvigvepegsdalars 201
                 vv+ g+++d+a++ +a+l++  +g +++++fd+p+vi+g+gtig+E+l+q + +k++a++++vGgGgliaGi++++k   p++++igve+  ++a+ +s
  KHJ33910.1 174 VVLHGQNFDAAKDECARLEKI-HGLTNIPPFDDPYVIAGQGTIGMELLRQANlQKLEAIFCCVGGGGLIAGIGTYVKRLAPHIKIIGVETYDANAMIQS 271
                 *********************.**************************99999********************************************** PP

                 CS..S.SS..B.SSS.CCSTCSCGTTCCHHHHSEEEEEEEEEEHHHHHHHHHHHHHHHSB-B-HHHHHHHHHH.HH CS
        PALP 202 lragrrvtvpvsdtiadglavgspselafelldrlvdeivtvsdeealeamrllarregivvepssaaalaal.kl 276
                 l ag+rv ++    +adg av++++e++f+l+++ vde+++v+++e+++a++   ++++ +vep++a ala+l k 
  KHJ33910.1 272 LSAGERVVLKDVGLFADGAAVRTVGEETFRLCKEVVDEVIQVTTDETCAAIKDIFEDTRSIVEPAGALALAGLkKY 347
                 *************************************************************************533 PP

>> Thr_dehydrat_C  C-terminal regulatory domain of Threonine dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.7   0.0   4.8e-21   4.3e-17       1      91 []     379     473 ..     379     473 .. 0.93
   2 !   71.7   0.0   3.7e-24   3.3e-20       3      91 .]     479     566 ..     477     566 .. 0.96

  Alignments for each domain:
  == domain 1  score: 61.7 bits;  conditional E-value: 4.8e-21
                     HHHTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Thr_dehydrat_C   1 eraevgegleallavefpeqpGaLkkFlellggrndiTlfeYrkagekngkvLvgvev.....sqaeeldelierleklgykvedlsknellkeh 90 
                     era++ge +e ll+v +pe pG++ + +e + +++ +T+f Yr+ +ek ++vL+g+++     ++++el++l  r+++ +++v dls +el+k h
      KHJ33910.1 379 ERAALGERKEVLLSVSIPETPGSFAELIERVMPHM-VTEFIYRYSSEKIANVLIGISLvssasQRDQELNSLLSRIRSGDMTVTDLSGDELAKSH 472
                     89*********************************.********************985444344567999**********************99 PP

                     X CS
  Thr_dehydrat_C  91 l 91 
                     +
      KHJ33910.1 473 V 473
                     7 PP

  == domain 2  score: 71.7 bits;  conditional E-value: 3.7e-24
                     HTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Thr_dehydrat_C   3 aevgegleallavefpeqpGaLkkFlellggrndiTlfeYrkagekngkvLvgvevsqaeeldelierleklgykvedlsknellkehl 91 
                     + ++ ++e+l++++fpe+ GaL kFl+ l ++ +i+ f+Yr++g + gkvLvg+  ++ae  +el+  ++k gy+ ed +++e+++++l
      KHJ33910.1 479 GRSNVADERLYMFNFPERLGALEKFLKILRPKYNISAFQYRNTGSDIGKVLVGILCPEAEV-KELERFFRKIGYHWEDCTQSEVFRTFL 566
                     667889***************************************************7777.************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4007.48
//
Query:       KHJ33911.1  [L=1165]
Description: putative kinesin-like protein bimc [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     2e-109  365.6   0.7     2e-109  365.6   0.7    2.2  2  Kinesin          Kinesin motor domain
    4.7e-26   91.5   2.1    1.5e-25   89.8   0.1    2.9  2  Microtub_bd      Microtubule binding
    2.3e-05   24.8   2.3    2.3e-05   24.8   2.3    5.1  6  Microtub_bind    Kinesin-associated microtubule-binding
  ------ inclusion threshold ------
       0.16   11.9   0.6         16    5.5   0.0    3.4  4  HetR_C           Heterocyst differentiation regulator C-termi
       0.33   11.1   2.3        1.3    9.1   0.3    2.7  2  DUF5624          Domain of unknown function (DUF5624)
          2    8.4   6.2          3    7.8   0.3    3.6  3  ApoO             Apolipoprotein O
        9.3    6.9  15.4    2.5e+03   -0.9   0.1    5.8  2  DUF3800          Protein of unknown function (DUF3800)


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  365.6   0.7  7.7e-113    2e-109       1     333 []      72     404 ..      72     404 .. 0.95
   2 ?   -3.5   1.3       1.4   3.6e+03     123     202 ..     878     954 ..     811     958 .. 0.59

  Alignments for each domain:
  == domain 1  score: 365.6 bits;  conditional E-value: 7.7e-113
                 EE-SSSHHHHTTTTEBCEEEECTCTCEEEEEEEEECTTSCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHTBC.... CS
     Kinesin   1 RvRplnekekeeeeeeeveveeekkeeekkskkenkeeeekkfkFdkvfdeeatqeevyeetakplvesvleGynatifaYGqtgsGKTyTmegk.... 95 
                 R+R +ne+e +e++  + +++   k ++ + +   ++ ++k+++Fd+vf+++a+q+ +ye+++kp +e++l+Gyn+tifaYGqtg+GKTyTm+g+    
  KHJ33911.1  72 RCRGRNEREVRENSGVILSTN-GVKGKTLELSMGPNALNNKTYNFDRVFSSAADQAMIYEDVVKPALEEMLSGYNCTIFAYGQTGTGKTYTMSGDttek 169
                 9****************9987.67888889999999*************************************************************** PP

                 ...TTTSBSHHHHHHHHHHHHHHHCTTTHEEEEEEEEEEEEEETTEEEETTSTTTTSTSSEBEEEECTTSC....CEEETTS--EEESSHHHHHHHHHH CS
     Kinesin  96 ...eeeeeGiipraleelFesikkekeekekefsvkvsylEiYneeiyDLLeskkskkkkklkiredskkg....evyvkgltevevksaeevlellek 187
                     ++++Giipr+l++lF++++ +      e+svk+s++E+Ynee++DL++++   + +klki++d +++    +++v+g++e +vksa e ++ll++
  KHJ33911.1 170 fnlLSDDAGIIPRVLHSLFKKLEIND----AEWSVKCSFIELYNEELRDLISPD---DGTKLKIYDDYSNKkghlSTIVQGMEESHVKSAAEGIKLLQS 261
                 **98889***************8754....469********************9...45569999987766567789********************** PP

                 HHHHHTSTTSSCTSHHCCSEEEEEEEEEEEETTTTTCEEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTSTSCGG CS
     Kinesin 188 geknrkvaetklneeSSRSHavftitleqknlkeeteekvkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaekkkskhipYR 286
                 g+ +r+va+tk+n+ SSRSH+vft+t   k+++e+ e+ ++++klnLvDLAGsE+++++g ae++r  Ea+ iNkSLl+Lgrvi+aL++k  s h+pYR
  KHJ33911.1 262 GNLKRQVASTKCNDLSSRSHTVFTVTAYIKRTAENGEDYISAGKLNLVDLAGSENIQRSG-AENKRAAEAGLINKSLLTLGRVINALVDK--SPHVPYR 357
                 *******************************999999889********************.58999************************..******* PP

                 GSHHHHHTGGGHSSSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHCTT CS
     Kinesin 287 dSkLTrlLqdsLgGnsktlmivtvspssenleetlstlkfaerakei 333
                 +SkLTrlLqdsLgG++kt++i+tvsp++ nleet+stl++a rak+i
  KHJ33911.1 358 ESKLTRLLQDSLGGRTKTCIIATVSPAKINLEETISTLDYAFRAKNI 404
                 *********************************************98 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.4
                 EEEEEEEEEEEEETTEEEETTSTTTTSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTSTTSSCTSH CS
     Kinesin 123 kefsvkvsylEiYneeiyDLLeskkskkkkklkiredskkgevyvkgltevevksaeevlellekgeknrkvaetklnee 202
                  +++v  s +E  +++++ L +  ++ ++++ +  + ++     +++l++   ++++++ ++l++ +++    e ++n++
  KHJ33911.1 878 LNLQVIDSQMETIKDQVHALENLVSKVRAQNGNCFRTHE---SSLNNLSKSVHSTYDNIKSILDSTQDRIYNFERDVNSR 954
                 344444455555555554443222222222333333333...24666666666666666666666666666666666655 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.8   0.1     6e-29   1.5e-25       8     149 .]      55     216 ..      50     216 .. 0.82
   2 ?   -1.7   0.2      0.94   2.4e+03      37      64 ..     926     957 ..     888     971 .. 0.61

  Alignments for each domain:
  == domain 1  score: 89.8 bits;  conditional E-value: 6e-29
                  HHHCHHHHHHHCTB-EEEEEEECCCS-.T...EEEETTT..............TTTEEEE-SEEEECTTHCCCCCCCC.HHHHHHHHTT--EEEEEEE CS
  Microtub_bd   8 RrkleNtiqelkGniRvfarvrpeles.ek..akikfpe...........eekkkkkefsFdrvfeseseqeevfeei.sqlvqsaldgynvcifayg 90 
                   r  eN+ +e++ n+ v +r r+e e  e+  + ++++             +  ++k+++Fdrvf+s + q++++e++ +  ++  l+gyn++ifayg
   KHJ33911.1  55 DRDFENDDEETNINVVVRCRGRNEREVrENsgVILSTNGvkgktlelsmgPNALNNKTYNFDRVFSSAADQAMIYEDVvKPALEEMLSGYNCTIFAYG 152
                  5788888888888888888888777764446633333313455666888867899**********************6377899999*********** PP

                  S........................ST-HCHHHHHHHHHHCCTSCCCCEEEEEEEEEEESS-EEETT CS
  Microtub_bd  91 qTGsGKtyTmeg........eeeeagmipraveeifetiselkekgwkyeielqfveiynekvqDlL 149
                  qTG GKtyTm+g         +++ag ipr+++++f++++ +    ++++++++f+e+yne+++Dl+
   KHJ33911.1 153 QTGTGKTYTMSGdttekfnlLSDDAGIIPRVLHSLFKKLEIN---DAEWSVKCSFIELYNEELRDLI 216
                  ************9887776667889*************9999...6788999*************96 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.94
                  EEEETTT.......TTTEEEE-SEEEECTTHC CS
  Microtub_bd  37 akikfpe....eekkkkkefsFdrvfeseseq 64 
                  ++ ++++     ++++++ ++F+r ++s s q
   KHJ33911.1 926 VHSTYDNiksiLDSTQDRIYNFERDVNSRSDQ 957
                  44444435567557889999999988888755 PP

>> Microtub_bind  Kinesin-associated microtubule-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   9.9      0.36   9.3e+02      29     125 ..     416     520 ..     409     539 .. 0.74
   2 ?   -0.9   0.6      0.78     2e+03      51      92 ..     646     685 ..     635     711 .. 0.66
   3 ?   -4.0   3.4       6.9   1.8e+04      41      71 ..     749     780 ..     725     847 .. 0.49
   4 ?   -1.8   0.8       1.5   3.8e+03      42      82 ..     817     853 ..     797     890 .. 0.53
   5 ?   -2.0   1.1       1.7   4.4e+03      62     102 ..     879     921 ..     821     964 .. 0.49
   6 !   24.8   2.3   9.1e-09   2.3e-05       2      40 ..     985    1023 ..     984    1109 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.36
  Microtub_bind  29 reellerfrqeqeeldaalti...ee....eeevsqdsleeeesie.tneslasekssidenlkcqesggvpffqrkkslkkdkenkavntlersk 116
                    ++ ll++f +e e+l+++l      +    ++e  +++  + es +  +e+ a +  +++ nl+ + ++  ++ ++   lkkd+e++ ++ le+ k
     KHJ33911.1 416 KKTLLKEFTAEIEKLKSELIAtrqRNgvylSNESYEEMTLQSESRRiLSEEQAAKIEMMEINLCKKVQELFSLTSNFTDLKKDNESAKIA-LEEMK 510
                    6789***********99999876622344433333333334444445789999999999*****999****************9998855.55555 PP

  Microtub_bind 117 v.eekteksl 125
                       +++e+ l
     KHJ33911.1 511 TlLQQSEHAL 520
                    5466666655 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.78
  Microtub_bind  51 e.eeevsqdsleeeesietneslasekssidenlkcqesggvp 92 
                    + e +++qds   e  i+  esl + k+ ++enlk  +++g++
     KHJ33911.1 646 SiETKICQDSACAEGDIN--ESLTQIKT-LHENLKSRTENGLQ 685
                    347788888887777766..66555554.47788888877764 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 6.9
  Microtub_bind  41 eeldaaltieeeeevsqdsleeeesie.tnes 71 
                     e+ ++ +ie ++++++  lee+++++  +++
     KHJ33911.1 749 REFALKSNIEASKRLEETLLEEQNQATiDRQN 780
                    34455555544666666666655555522222 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 1.5
  Microtub_bind  42 eldaaltieeeeevsqdsleeeesietneslasekssiden 82 
                    ++++++ +   ee  ++ +e+ee +   e+++  + ++d+ 
     KHJ33911.1 817 KFKSSTLS--YEEGMKNWNEQEEKL--IEEISRSREVLDNK 853
                    33333222..222222222222222..24555555554443 PP

  == domain 5  score: -2.0 bits;  conditional E-value: 1.7
  Microtub_bind  62 eeesie.tneslasekssidenlkcqe..sggvpffqrkkslkk 102
                    + ++i+   e + ++   ++ nl+ +   ++g  f  +++sl++
     KHJ33911.1 879 NLQVIDsQMETIKDQVHALE-NLVSKVraQNGNCFRTHESSLNN 921
                    22333322222323333322.33322222555555555555554 PP

  == domain 6  score: 24.8 bits;  conditional E-value: 9.1e-09
  Microtub_bind    2 LkkdvpTGtTPqRkeylYPrtlvrtepreellerfrqeq 40  
                     L+k+++TG+TP++ +y+YP  l rt  ++++l +  +  
     KHJ33911.1  985 LQKYQATGETPKKTQYIYPTLLPRTDDHQKILSSCVKDI 1023
                     99******************************9876655 PP

>> HetR_C  Heterocyst differentiation regulator C-terminal Hood domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0    0.0063        16       5      44 ..     158     198 ..     155     215 .. 0.85
   2 ?   -4.2   0.1       6.6   1.7e+04      33      49 ..     505     521 ..     494     524 .. 0.73
   3 ?    2.4   0.1     0.058   1.5e+02      14      63 ..     823     869 ..     819     883 .. 0.73
   4 ?   -2.3   0.0       1.7   4.4e+03      15      38 ..     943     966 ..     936     993 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0063
      HetR_C   5 rtyimvedtaryfrlmrdwaerkpkvlrvl.eeldippekl 44 
                 +ty+m  dt+  f l+ d a   p+vl  l  +l+i + ++
  KHJ33911.1 158 KTYTMSGDTTEKFNLLSDDAGIIPRVLHSLfKKLEINDAEW 198
                 79************************987636788876655 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 6.6
      HetR_C  33 vleeldippekleqale 49 
                 +lee+  + ++ e+ale
  KHJ33911.1 505 ALEEMKTLLQQSEHALE 521
                 68888888888888876 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.058
      HetR_C  14 aryfrlmrdwaerkpkvlrvleeldippekleqaleeldeiirewadkyh 63 
                   y   m++w e+++k    +ee+    e l++ + e   +i + +++ h
  KHJ33911.1 823 LSYEEGMKNWNEQEEKL---IEEISRSREVLDNKIRENWVVIDDHSNHLH 869
                 567778******99875...577777777777777777777766666666 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 1.7
      HetR_C  15 ryfrlmrdwaerkpkvlrvleeld 38 
                 r + + rd   r  +v + le +d
  KHJ33911.1 943 RIYNFERDVNSRSDQVQKSLESVD 966
                 667777888888888888888887 PP

>> DUF5624  Domain of unknown function (DUF5624)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.32   8.1e+02      33      73 ..     507     547 ..     492     568 .. 0.86
   2 ?    9.1   0.3   0.00052       1.3      25      95 ..     826     897 ..     821     915 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.32
                 HHHHHHHHHHHHHHHHH-SS-HHHHS--GGGGGGHHHHHHH CS
     DUF5624  33 saaekLlekikavrevnseelwrdkiaveafqgreekiaal 73 
                 +++++Ll++ +++ e   ++l  +k+  +a+q+ e+++ ++
  KHJ33911.1 507 EEMKTLLQQSEHALETTRKSLSDEKVLRKAHQETEKRLSNV 547
                 68999****************************99988765 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00052
                 HTT-THHHHHHHHHHHHHHHHHHHH-SS-HHHHS--GGGGGGHH.HHHHHHHHHHHHHHHHHHHHHTTSS-- CS
     DUF5624  25 elgdeswrsaaekLlekikavrevnseelwrdkiaveafqgree.kiaalvdYalslteeylervledaskl 95 
                 e g ++w+++ ekL+e+i ++rev  +++ ++ + ++ ++++ + + ++l d  l++  + +e+++++ ++l
  KHJ33911.1 826 EEGMKNWNEQEEKLIEEISRSREVLDNKIRENWVVIDDHSNHLHgTTKSLQDLNLQVIDSQMETIKDQVHAL 897
                 778999*******************99999999999999888652667888999988888888888777665 PP

>> ApoO  Apolipoprotein O
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       1.1   2.9e+03      35      67 ..     503     533 ..     493     539 .. 0.80
   2 ?    1.5   0.1      0.11   2.7e+02       8      59 ..     672     723 ..     658     729 .. 0.68
   3 ?    7.8   0.3    0.0012         3      10      61 ..     891     942 ..     862     964 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.1
        ApoO  35 qdelnkvkskvetaeqsvtdtiasLkeppedll 67 
                 + +l+++k+ ++++e+ +++t +sL++  e++l
  KHJ33911.1 503 KIALEEMKTLLQQSEHALETTRKSLSD--EKVL 533
                 556788899999999999999999999..5555 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.11
        ApoO   8 pseeptdrLeegvrslRkslepytsavqdelnkvkskvetaeqsvtdtiasL 59 
                   e+ ++r e+g ++l  s ++ +s+v++e+n++ s++ + ++++++ ++sL
  KHJ33911.1 672 LHENLKSRTENGLQELSTSSKNIFSEVTSEFNTMHSQLRNFYSKLSQDFNSL 723
                 3366667777777777777777777777777777777777777777776666 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0012
        ApoO  10 eeptdrLeegvrslRkslepytsavqdelnkvkskvetaeqsvtdtiasLke 61 
                 + ++ +Le+ v+++R +  + + + +++ln+++++v++++ ++++ ++s ++
  KHJ33911.1 891 KDQVHALENLVSKVRAQNGNCFRTHESSLNNLSKSVHSTYDNIKSILDSTQD 942
                 5678899999999999999999999999999999999999999999888776 PP

>> DUF3800  Protein of unknown function (DUF3800)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.98   2.5e+03      51      88 ..      54      86 ..      39     128 .. 0.73
   2 ?   -3.7  11.2         7   1.8e+04      50      50 ..     842     842 ..     142     987 .. 0.69

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.98
     DUF3800 51 iakflkkndliksdeesdesilivldkkkkkekakkel 88
                 +++     ++++dee ++++++ +++++++e++++ +
  KHJ33911.1 54 KDRD-----FENDDEETNINVVVRCRGRNEREVRENSG 86
                2333.....33389999999999999988888766554 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 7
     DUF3800  50 r 50 
                 +
  KHJ33911.1 842 E 842
                 2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1760  (0.098165); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.97u 0.29s 00:00:01.26 Elapsed: 00:00:00.44
# Mc/sec: 7888.76
//
Query:       KHJ33912.1  [L=103]
Description: hypothetical protein EV44_g3508 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 783.54
//
Query:       KHJ33913.1  [L=462]
Description: putative tubulin gamma chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-68  231.2   0.0    1.8e-68  230.7   0.0    1.2  1  Tubulin          Tubulin/FtsZ family, GTPase domain
    1.5e-45  154.4   0.6    3.2e-45  153.4   0.2    1.7  2  Tubulin_C        Tubulin C-terminal domain
    4.9e-07   30.1   0.0    9.7e-07   29.1   0.0    1.5  1  Misat_Tub_SegII  Misato Segment II tubulin-like domain
  ------ inclusion threshold ------
      0.035   13.8   0.1       0.15   11.7   0.0    2.1  3  Tubulin_3        Tubulin domain


Domain annotation for each model (and alignments):
>> Tubulin  Tubulin/FtsZ family, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  230.7   0.0   3.9e-72   1.8e-68       1     196 [.       4     214 ..       4     215 .. 0.99

  Alignments for each domain:
  == domain 1  score: 230.7 bits;  conditional E-value: 3.9e-72
                 EEEEEEEHHHHHHHHHHHHH...HHHCH..............HHHT.....TTEEEEE....EEESBHHHHHTS-GS........EEEE--CCC..CTT CS
     Tubulin   1 eiivigvGqcGnqignelwellakehgiqsdg..........dslesfFsesgkveyiprsvaidtdpqvlneikags..elfnpnklllgkeg..agn 85 
                 eii+++ GqcGn ig+e+w++l++ehgi++dg          d++++fF++s++ +yipr+++id++p+v+n i++g+  +++np+++++gk+g  a+n
  KHJ33913.1   4 EIITVQAGQCGNSIGSEFWQQLCQEHGISQDGnleefateggDRKDVFFYQSDDTRYIPRAILIDLEPRVINGIQTGPykNIYNPENFFVGKNGvgAAN 102
                 7****************************999**************************************************************99*** PP

                 C--TT-HHHHHHHHHHTHHHHHHHHTT-SE.SEEEEEEETTSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE--..GG.G-HHHHHHHHHHHHHHHHT-S CS
     Tubulin  86 ngaggypevgkeaaeeileeirkevekcdslqgffitaslgGGTGSGlgpvilevlkeeypkalvvtvvvlPs..efsevvvepynailalkelieesd 182
                 n+  gy++ g+ ++e+i+e+i++e++++dsl+gf+i++s++GGTGSGlg+++le+l++++pk++++t++v+P   +  +vvv+pyn++l++++l +++d
  KHJ33913.1 103 NWGDGYQT-GELVHEDIMEMIDREADGSDSLEGFMILHSIAGGTGSGLGSFLLERLNDRFPKKIIQTYSVFPDttNSGDVVVHPYNSLLSMRRLTQNAD 200
                 ********.****************************************************************98888********************* PP

                 EEEEEEHHHHHCCS CS
     Tubulin 183 avividNdaLlkil 196
                 +v+v+dN aL +i+
  KHJ33913.1 201 SVVVLDNGALSRIA 214
                 **********9986 PP

>> Tubulin_C  Tubulin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.88     4e+03      32      47 ..     223     238 ..     216     245 .. 0.63
   2 !  153.4   0.2   7.1e-49   3.2e-45       1     124 [.     264     391 ..     264     393 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.88
                 HTCSGGGBSSSTSTTT CS
   Tubulin_C  32 allepknimvkvdprk 47 
                   ++++n++v++ ++ 
  KHJ33913.1 223 PSFQQTNQLVSTVMSA 238
                 4567777777665544 PP

  == domain 2  score: 153.4 bits;  conditional E-value: 7.1e-49
                 TTC-EEEEEEESSSCTT...TTTCS-HHHHHHHHHTCSGGGBSSSTSTTT.SSEEEEEEEEEESSSHHHHHHHHHHHHHTTTS-BSTTSTTTEEEEEEE CS
   Tubulin_C   1 PrlhFlltsyaPlvsae...kaavektsvqdvtrallepknimvkvdprk.gkylaiallirGdvepkevnkavqrikekkkaqfveWiptgikvalnk 95 
                 Pr+hFl+tsy+P++ ++   +++v+kt+v dv+r+ll+pkn mv++ p k ++y++i+++i+Gdv+p++v+k++ ri+e+k a+f+ W+p++i+val+k
  KHJ33913.1 264 PRCHFLMTSYTPFTGHNveqAKTVRKTTVLDVMRRLLQPKNRMVSTIPGKkSCYISILNVIQGDVDPTDVHKSLLRIRERKLATFITWGPASIQVALTK 362
                 9*************9999888999********************98887659*********************************************** PP

                 CECT-TTTSSCEEEEEEEEGGGHHHHHHH CS
   Tubulin_C  96 kspyvkkqskvsvlmlaNttsiaelfkrl 124
                 kspy+  +++vs+lmlaN+tsia+lfkr+
  KHJ33913.1 363 KSPYIPMNHRVSGLMLANHTSIATLFKRI 391
                 ***************************98 PP

>> Misat_Tub_SegII  Misato Segment II tubulin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.0   2.2e-10   9.7e-07       1      67 [.       3      71 ..       3      91 .. 0.81

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 2.2e-10
  Misat_Tub_SegII  1 rEivtlqlGnyaNyvgtHfWNt..Qesyftydeeeee...sevd.hdvlfregetkqgqvtytPRllivDlkg 67
                     rEi+t+q G+  N +g+ fW +  Qe+ +++d + ee   +  d +dv f     ++ ++ y+PR++++Dl+ 
       KHJ33913.1  3 REIITVQAGQCGNSIGSEFWQQlcQEHGISQDGNLEEfatEGGDrKDVFFY----QSDDTRYIPRAILIDLEP 71
                     8*******************9655*****9999998766533341445554....47889**********976 PP

>> Tubulin_3  Tubulin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       0.6   2.7e+03      44      72 ..      16      45 ..      14      58 .. 0.76
   2 ?   11.7   0.0   3.3e-05      0.15      68     152 ..     126     205 ..     103     245 .. 0.59
   3 ?   -3.3   0.0       1.4   6.2e+03     128     157 ..     297     325 ..     280     347 .. 0.62

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.6
   Tubulin_3 44 svGeeLfeeldkehdll.drdlrpfaeecd 72
                s+G+e++++l +eh +  d +l  fa e  
  KHJ33913.1 16 SIGSEFWQQLCQEHGISqDGNLEEFATEGG 45
                689999********9953788888887764 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 3.3e-05
   Tubulin_3  68 aeecdqlrglqvftgvddaWG.GfaakylerlrdeygkksilvWvlaleeklkkkkkaklerklkklnkarslkelseqaslyvPi 152
                 a+ +d+l+g+ ++ ++    G G ++  lerl d ++kk i ++ +  +++++ +        ++  n+  s+++l+++a  +v +
  KHJ33913.1 126 ADGSDSLEGFMILHSIAGGTGsGLGSFLLERLNDRFPKKIIQTYSVFPDTTNSGD------VVVHPYNSLLSMRRLTQNADSVVVL 205
                 56789**********998877699999************9988866433333222......2233344444444444444444433 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 1.4
   Tubulin_3 128 rklkklnkarslkelseqaslyvPiaklsd 157
                 r+l    k r ++++  + s y+ i ++ +
  KHJ33913.1 297 RRL-LQPKNRMVSTIPGKKSCYISILNVIQ 325
                 333.23467788888888888888877553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (462 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3467.87
//
Query:       KHJ33914.1  [L=585]
Description: putative adenosine deaminase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-24   87.4   0.0    1.9e-24   86.6   0.0    1.5  1  A_deaminase  Adenosine/AMP deaminase


Domain annotation for each model (and alignments):
>> A_deaminase  Adenosine/AMP deaminase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.6   0.0   1.1e-28   1.9e-24      49     326 ..     237     540 ..     120     542 .. 0.78

  Alignments for each domain:
  == domain 1  score: 86.6 bits;  conditional E-value: 1.1e-28
                  CHHHHCCHCCCHHCCCHHHTCCCCCCHHHHHHCCCCCHCTTCCCCCCCCSHHHHHHH-GC.STCCH......HHHCCCCCCCCCCH.CCT-EEEEEEC CS
  A_deaminase  49 kfesLkeflydlsvdvlvlhwlievvrllavekakdlakdfvkylevifsPlfeatagpq.lpele......vvlkvvdgfdsved.eskvkerlilv 138
                  + + +k+f+  + +    l   + ++rl     + +l++d+v++++++ + +f+  ++++  pe +      v+ + ++  ++ e+ ++   +r i  
   KHJ33914.1 237 VNDIWKKFSSVFLILDTILF-YEPIFRLCLRRIFIQLHADGVRWADLRLAFTFHYYREGNeQPETDfsrlfqVFHEELEKYQASEEgKTFWGSRIIWT 333
                  44445555555555555555.77788888888889999999999999999999997777755554411111133333322222222112235777777 PP

                  CETT.TCCGHCCCHHHHHHCCCC...CCCCCCCCC-TTSTTGGG....HHHHHCCCCH...TT-EEEEEESSSS-.....CHHHHHHHHCS--SCECE CS
  A_deaminase 139 ksrk.peewseeinelasyyrdy...tvvnldllndekiepasl....flklraeagk...stllltpHaGEagg.....lehvveAllllkaerigH 220
                   +r  ++    e  e+++  +      +++ dl ++e ++ + +    +l +++++      +l +  HaGE  g      + + +A+ll ++ rigH
   KHJ33914.1 334 GIRIlESRKIIEDMEACISMKIAypkLISGYDLVGQEDPGRTLKdllpELFWFKRQCTlesIELPFFFHAGECLGdgsetDQNLFDAILL-GTRRIGH 430
                  8887877778888888876553223599*******888877766777877788777541114677899****865222324789***998.******* PP

                  -GGGGGSHHHHHHHHHCT-EEEE-HHHHCCCSST-TTTT-CHHHHHHTT-EEEE--BSCCCCT-S...HHHHHHHHHHHH.T--HHHHHHHHHHHHHC CS
  A_deaminase 221 GvrlrkdpvLqyllalaqiplevcPlSNvalgafleyaenPlkeflerglnvslntDDPlqfgtt...LieeYaiaaqvf.klseedlaelarNsvkq 314
                  G +l k p L +l  +++i +e cP+SN  l+   +++ +Pl+ ++  g+  sl+ DDP + g +   L +++ +a q +  l+ + la la Nsv+ 
   KHJ33914.1 431 GFSLYKHPLLIELVKEKRILVESCPISNEVLRLCSSISSHPLPALIASGVSCSLSNDDPTILGHDtvgLTHDFWQALQGWdNLGLAGLACLAENSVRW 528
                  ***************************************************************999**************99**************** PP

                  SSS-HHHHHHHC CS
  A_deaminase 315 sflsadekkkll 326
                  ++++++  + +l
   KHJ33914.1 529 AAFEDEDAETWL 540
                  ******999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       383  (0.021362); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 3848.51
//
Query:       KHJ33915.1  [L=540]
Description: putative aaa family atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-58  196.6   0.0    5.6e-58  195.6   0.0    1.5  1  MgsA_C           MgsA AAA+ ATPase C terminal
    1.2e-22   80.0   0.9      3e-22   78.7   0.9    1.8  1  AAA_assoc_2      AAA C-terminal domain
    1.2e-12   48.3   0.1    3.7e-12   46.8   0.1    1.8  1  AAA              ATPase family associated with various cellul
    1.1e-09   38.2   0.0    2.6e-09   37.0   0.0    1.6  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    0.00013   21.4   0.1       0.21   10.9   0.0    2.4  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
    0.00018   21.9   0.2      0.013   15.9   0.0    2.7  3  AAA_16           AAA ATPase domain
    0.00027   20.7   0.1      0.022   14.5   0.1    2.2  1  Sigma54_activat  Sigma-54 interaction domain
     0.0011   18.2   0.0     0.0018   17.5   0.0    1.3  1  DUF815           Protein of unknown function (DUF815)
     0.0063   16.5   0.1      0.062   13.3   0.1    2.3  1  AAA_5            AAA domain (dynein-related subfamily)
     0.0065   15.7   0.0     0.0098   15.1   0.0    1.3  1  TIP49            TIP49 P-loop domain
     0.0073   16.6   0.5      0.038   14.3   0.3    2.4  2  AAA_22           AAA domain
     0.0079   16.5   0.1      0.017   15.4   0.1    1.6  1  AAA_19           AAA domain
     0.0084   15.5   0.2      0.021   14.2   0.2    1.7  1  zf-ribbon_3      zinc-ribbon domain
     0.0092   15.8   0.0      0.028   14.3   0.0    1.8  1  AAA_3            ATPase family associated with various cellul
  ------ inclusion threshold ------
      0.021   14.9   0.0      0.043   13.9   0.0    1.5  1  AAA_14           AAA domain
      0.023   14.7   0.0      0.042   13.8   0.0    1.4  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
      0.029   14.4   0.1        5.6    6.9   0.0    2.4  2  ResIII           Type III restriction enzyme, res subunit
      0.043   13.5   0.0      0.095   12.4   0.0    1.6  1  AAA_30           AAA domain
      0.075   12.2   0.0       0.15   11.2   0.0    1.4  1  NB-ARC           NB-ARC domain
      0.076   13.1   0.0       0.15   12.2   0.0    1.5  1  Sigma54_activ_2  Sigma-54 interaction domain
      0.094   12.8   0.1       0.19   11.8   0.1    1.5  1  SKI              Shikimate kinase
       0.12   12.0   0.0       0.23   11.2   0.0    1.5  1  AAA_24           AAA domain
       0.13   12.1   0.0       0.28   11.0   0.0    1.5  1  CPT              Chloramphenicol phosphotransferase-like prot
       0.17   11.1   0.1       0.55    9.5   0.0    1.8  2  Zeta_toxin       Zeta toxin
        1.9    9.7   4.6        4.1    8.6   4.6    1.6  1  DUF3484          Membrane-attachment and polymerisation-promo
        2.1    6.8   8.1        2.7    6.4   8.1    1.1  1  KAR9             Yeast cortical protein KAR9


Domain annotation for each model (and alignments):
>> MgsA_C  MgsA AAA+ ATPase C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.6   0.0   8.2e-61   5.6e-58       1     156 [.     374     531 ..     374     537 .. 0.96

  Alignments for each domain:
  == domain 1  score: 195.6 bits;  conditional E-value: 8.2e-61
                 TT-HHHHHHHHHHHHHTT--HHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHHHHHH-TTTTHHHHHHHHHHHHCS----GG.GHHHHHHHHH----.. CS
      MgsA_C   1 GSdpdAAlyylarmleaGedprfiaRRlviiAseDiGlAdpqalqlavaaaeaveriGlpEariaLaqavvylalapKSnaaykAikkaledvkekk.. 97 
                 GSdpdAAlyylarml++Ge+p +iaRR+viiAseDiGlAd+++l+la++a+ a+e+iG+pE+ri La+a+v l+lapKS+++y+++++a ++++e +  
  KHJ33915.1 374 GSDPDAALYYLARMLQSGENPLYIARRIVIIASEDIGLADNSMLSLATSAYVAAEKIGMPECRISLAHATVALCLAPKSTRSYRGLNNAFAALREPGva 472
                 9**********************************************************************************************7633 PP

                 -----GGGST...........T-T---GGG--SS------S-CCG--..--------HH CS
      MgsA_C  98 slevPlhLrnaptklakklgygkgYkyphdypegvvkqqylpdelkkkkfYeptergle 156
                 +l++P  Lrnaptkl+k+lgyg++Yky+ +y++g vkq+ylp +l  ++f e ++ g+e
  KHJ33915.1 473 ALPIPISLRNAPTKLMKELGYGDKYKYNPNYKDGKVKQDYLPPQLIGRTFLEDRDLGTE 531
                 789******************************************99999998888877 PP

>> AAA_assoc_2  AAA C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.7   0.9   4.4e-25     3e-22       7      81 .]     304     373 ..     282     373 .. 0.94

  Alignments for each domain:
  == domain 1  score: 78.7 bits;  conditional E-value: 4.4e-25
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXHHHHHHHHHHHHH CS
  AAA_assoc_2   7 leddalealaeladGDaRkaLnlLElaaeaaeakegkieitledleealqrkalryDkagdehYdliSAlhKSiR 81 
                  +++d l+++ +++dGDaR+aLnlLEla++ +     k+eit++++++al+ k+l yD+a d+hYd+iSA+hKS+R
   KHJ33915.1 304 IDKDFLQYISAFSDGDARTALNLLELALSLST----KAEITKSEIKSALT-KTLVYDRASDQHYDTISAFHKSVR 373
                  899*************************9986....79***********5.5688*******************9 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.8   0.1   5.4e-15   3.7e-12       1     127 [.     168     276 ..     168     281 .. 0.87

  Alignments for each domain:
  == domain 1  score: 46.8 bits;  conditional E-value: 5.4e-15
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS....TSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakeka....kpsilfiDEidalaksrsgseseeeervvnqLlteldg 95 
                 ++l+G  GtGKT++a+ +a+++g++f+ei+ ++          ++ +++f+ea+ +     +++i+f DEi++++k++           ++++l  ++ 
  KHJ33915.1 168 MILWGGAGTGKTTIARCIASQVGSKFVEINSTSSG-------IAECKKIFAEARGELsivgRKTIIFCDEIHRFTKTQ-----------QDVFLGPVES 248
                 79*****************************9998.......899999999998887899878***************...........8888877665 PP

                 TTTSSSTEEEEEEESS..GGGSTHHHHSTTSSEE CS
         AAA  96 vkkkeskvivigatnr..pdkldpallrgRfdrk 127
                        +++igat++    k+++all +R+ + 
  KHJ33915.1 249 GL-----ITLIGATTEnpSFKVQNALL-SRCRVF 276
                 54.....58999998877778888888.898776 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   0.0   3.8e-12   2.6e-09       1     115 [.     136     253 ..     136     270 .. 0.78

  Alignments for each domain:
  == domain 1  score: 37.0 bits;  conditional E-value: 3.8e-12
      RuvB_N   1 lrPksleeyigqekvkeklkifieaakkreealdhvllyGpPGlGkttlakiiakelg...vklkitsgPvlekagdla...alltnleekdvlfidei 93 
                 +rP+sl++  gq+ v ++  +    a   ++ +  ++l G  G Gktt+a+ ia+++g   v++++ts+ + e ++ +a   + l+ + +k ++f dei
  KHJ33915.1 136 MRPSSLDDVYGQDLVGSNGVL---RALIEQDRVPSMILWGGAGTGKTTIARCIASQVGskfVEINSTSSGIAECKKIFAearGELSIVGRKTIIFCDEI 231
                 69***********99987433...34455666778999*******************943446789999998877665521256888889********* PP

      RuvB_N  94 hrlsraveevlysamedfrldi 115
                 hr++++ ++v+   +e   + +
  KHJ33915.1 232 HRFTKTQQDVFLGPVESGLITL 253
                 *******999988888766554 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.1    0.0029         2      24      44 ..     167     187 ..     147     193 .. 0.90
   2 !   10.9   0.0    0.0003      0.21      98     142 ..     213     258 ..     191     273 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0029
  Mg_chelatase  24 nlllvGppGsGKtmlakrlps 44 
                   +++l G +G+GKt +a++++s
    KHJ33915.1 167 SMILWGGAGTGKTTIARCIAS 187
                   699**************9975 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.0003
  Mg_chelatase  98 kpGeisl.ahnGvLfLDElpefkrkvlevLRePledgevtisraka 142
                     Ge+s   ++ ++f DE+  f+++  +v+  P+e+g +t+  a++
    KHJ33915.1 213 ARGELSIvGRKTIIFCDEIHRFTKTQQDVFLGPVESGLITLIGATT 258
                   5688886257899**************************9876654 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.9e-05     0.013      21      57 ..     162     195 ..     153     214 .. 0.77
   2 ?    3.2   0.0      0.15     1e+02     130     154 ..     217     241 ..     194     249 .. 0.79
   3 ?   -2.0   0.0       5.9   4.1e+03     108     108 ..     359     359 ..     279     404 .. 0.52

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.9e-05
      AAA_16  21 sgrpelvllsGesGvGKsslvrellralekdggiflr 57 
                 ++r ++++l G +G+GK++++r+++ ++  +   f++
  KHJ33915.1 162 QDRVPSMILWGGAGTGKTTIARCIASQVGSK---FVE 195
                 44559********************988777...544 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.15
      AAA_16 130 lsrderplvlvlDdlqwadeaslql 154
                 ls  +r++++++D+++++  +++++
  KHJ33915.1 217 LSIVGRKTIIFCDEIHRFTKTQQDV 241
                 4555678************999998 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 5.9
      AAA_16 108 v 108
                  
  KHJ33915.1 359 D 359
                 0 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.1   3.2e-05     0.022      24     131 ..     167     260 ..     152     271 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.2e-05
                      -EEEECSTTSSHHHHHHHHHHHSTTTTS-EEEEETTTS-TTCHH.HHHHEBSSSSSTTTSS-BEHHHHHTTTSEEEEETGGGS-HHHHHHHHHH CS
  Sigma54_activat  24 svlitGesGtGKellaraiheaskrkekpfvavncaaipeelle.seLFGhekGaFtGAekekkGlfekadgGtlfLDeigelplelQekLlrv 116
                      s+++ G  GtGK+++ar+i ++     ++fv++n ++    + e  ++F  ++G  +              + ++f Dei++++ + Q  +l  
       KHJ33915.1 167 SMILWGGAGTGKTTIARCIASQV---GSKFVEINSTSS--GIAEcKKIFAEARGELS----------IVGRKTIIFCDEIHRFTKTQQDVFLGP 245
                      5678899***********97655...478999998754..34441345555544332..........23457899******************* PP

                      HHHSEEESBTSSSEE CS
  Sigma54_activat 117 lqegevervGsskei 131
                      +++g ++ +G+++e 
       KHJ33915.1 246 VESGLITLIGATTEN 260
                      **********98764 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   2.6e-06    0.0018      45     116 ..     157     231 ..     119     242 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 2.6e-06
      DUF815  45 eqfleglpannvLLwGarGtGKSslvkallneyaeegLrlievekedlkelpklvellr....erperfilfvDDL 116
                 ++++e+ +   ++LwG  GtGK ++ + + +++ ++ +  i+ + + ++e +k++++ r     + ++ i+f+D +
  KHJ33915.1 157 RALIEQDRVPSMILWGGAGTGKTTIARCIASQVGSKFVE-INSTSSGIAECKKIFAEARgelsIVGRKTIIFCDEI 231
                 567788888899******************999887655.344566799999999876633336789*******97 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.1     9e-05     0.062       2      95 ..     168     252 ..     167     297 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 9e-05
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT..--HHHHH--B--.........--------G-SEEEEESGGG--HHHHHHHHHHHHSSEEE CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrd..tteedlkgrreikngttslvdsplvraaregeilvlDEveraesevlnsLlslleerrll 95 
                 ++L G  GtgK+++a+ +a+ +++++++++ t++   + ++++ + +          ++l   + ++ i++ DE++r  +  ++++l + e   + 
  KHJ33915.1 168 MILWGGAGTGKTTIARCIASQVGSKFVEINSTSSgiAECKKIFAEAR----------GELS-IVGRKTIIFCDEIHRFTKTQQDVFLGPVESGLIT 252
                 79********************9999999877741112233333333..........6666.6678888888888888888888877777766555 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.4e-05    0.0098      36      94 ..     153     207 ..     134     286 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.4e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  36 agvivelikekklaGravLlaGpsgtGktalaiaiskelgedvpfvalsgsevyslevk 94 
                  gv+  li+++++   +++l G +gtGkt +a  i+ ++g+  +fv ++++    +e k
  KHJ33915.1 153 NGVLRALIEQDRVP--SMILWGGAGTGKTTIARCIASQVGS--KFVEINSTSSGIAECK 207
                 69999*******98..89999*******************6..5777777655555555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.3   5.5e-05     0.038       7      64 ..     167     217 ..     162     317 .. 0.86
   2 ?   -2.1   0.0       6.1   4.2e+03      39      84 ..     306     350 ..     282     361 .. 0.62

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5.5e-05
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst..sskdllrellral 64 
                 +++++G +GtGKTt +r +++q          ++++v+++ +ss+  + k+++ e   +l
  KHJ33915.1 167 SMILWGGAGTGKTTIARCIASQV---------GSKFVEINSTSSGiaECKKIFAEARGEL 217
                 6899******************9.........9999999999999777777766666555 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 6.1
      AAA_22  39 rpevvfvtlpsstsskdllrellralglelkaerlsseellealeq 84 
                 ++ + ++ + s+++ ++ l+ l  al l++ka + +++e+ +al++
  KHJ33915.1 306 KDFLQYISAFSDGDARTALNLLELALSLSTKA-EITKSEIKSALTK 350
                 33333777777777777777777777777766.6666666655554 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   2.5e-05     0.017      11      38 ..     166     193 ..     157     340 .. 0.64

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 2.5e-05
      AAA_19  11 kvllvtaGpGtGKTrvlkhivallvelg 38 
                 + +++ +G+GtGKT++ ++i + + +  
  KHJ33915.1 166 PSMILWGGAGTGKTTIARCIASQVGSKF 193
                 6799***********9999887665544 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.2     3e-05     0.021       2      18 ..       1      17 [.       1      17 [. 0.89

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3e-05
  zf-ribbon_3  2 tvrCPnCGa.plssddnv 18
                 +v+CP CG+ + +++d++
   KHJ33915.1  1 MVECPICGKaV-KPRDIN 17
                 89*******66.****96 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0     4e-05     0.028       3      99 ..     169     259 ..     167     269 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 4e-05
       AAA_3   3 llegvPGlaktllvkalakaldlefkriqftpdllPsdilGtevfeekekefefkkGpvfanllladeinrappktqsalleameerqvtvegethk 99 
                 +l g  G++kt++++ +a++++ +f  i  t+  +      +++f e++ e+++      + ++++dei r +   q  +l  +e   +t+ g+t++
  KHJ33915.1 169 ILWGGAGTGKTTIARCIASQVGSKFVEINSTSSGIA---ECKKIFAEARGELSIVGR---KTIIFCDEIHRFTKTQQDVFLGPVESGLITLIGATTE 259
                 677889*************************97664...46899****999998653...6899********9999999999999999999988876 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   6.2e-05     0.043       6      80 ..     169     238 ..     165     283 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 6.2e-05
      AAA_14   6 vitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelilek.lkeekktylflDEiqevpewe 80 
                 ++ G   +GKTt+++ ++++     +++++in  +   ++ ++   + e+  e+ + + +kt++f DEi++ ++ +
  KHJ33915.1 169 ILWGGAGTGKTTIARCIASQVG---SKFVEINSTSSGIAECKKI--FAEARGELsIVG-RKTIIFCDEIHRFTKTQ 238
                 66777789*****999998888...9********9888877754..455555554555.9**********997765 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   6.2e-05     0.042      21      52 ..     165     200 ..     132     208 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 6.2e-05
                 E..EEEEESTTSSHHHHHHHHHHHTT--..----TT CS
        TsaE  21 v..ilLeGdLGaGKTtlvrglakalgve..evkSPT 52 
                 v  ++L G  G+GKTt++r +a+++g +  e++S +
  KHJ33915.1 165 VpsMILWGGAGTGKTTIARCIASQVGSKfvEINSTS 200
                 144899********************9998999865 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.027        19      22      48 ..     163     189 ..     102     198 .. 0.77
   2 ?    6.9   0.0    0.0081       5.6     124     146 ..     214     236 ..     191     257 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.027
                 .TTSEEEEEESTTSTHHHHHHHHHHHH CS
      ResIII  22 krdkrglikmaTGtGKTlvaaklierl 48 
                 +r   ++++   GtGKT +a  ++ ++
  KHJ33915.1 163 DRVPSMILWGGAGTGKTTIARCIASQV 189
                 33447889**********997777666 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0081
                 ...HHHTTT-SEEEEETGGGTTS CS
      ResIII 124 eseellrdrfdviiiDEaHrlga 146
                   e    +r+ +i++DE Hr+++
  KHJ33915.1 214 RGELSIVGRKTIIFCDEIHRFTK 236
                 45566778889**********98 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00014     0.095      21      45 ..     168     192 ..     154     263 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00014
      AAA_30  21 avltGpAGtGKttalkalreaweaa 45 
                 ++l G+AGtGKtt+ + ++  + ++
  KHJ33915.1 168 MILWGGAGTGKTTIARCIASQVGSK 192
                 6899**********99998776655 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00022      0.15       8      43 ..     155     188 ..     152     204 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00022
                 HHHHHHCTTTSCSEEEEEEESTTSSHHHHHHHHCCS CS
      NB-ARC   8 viekLlekdelqslvvalvGmgGvGKttlakqilnk 43 
                 v   L e+d +    + l G +G GKtt+a+ i ++
  KHJ33915.1 155 VLRALIEQDRVP--SMILWGGAGTGKTTIARCIASQ 188
                 667788888888..899*************998876 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00021      0.15      24      90 ..     168     243 ..     158     282 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00021
                      EEEEEETT--HHHHHHCC--T.TS-EE--SSTTHHHH-HHHHHHHT........TTSEEEEEE-TT--HHHHHHHH CS
  Sigma54_activ_2  24 vfltGekGsgkelvArlLhkn.sgpwleifvverlaklpldlleqa........kggtLylkdiadlskaeqkeLl 90 
                      + l G++G+gk+++Ar ++++ +++ +ei    +++++ ++++++a        +  +++  +i+ + k +q   l
       KHJ33915.1 168 MILWGGAGTGKTTIARCIASQvGSKFVEINSTSSGIAECKKIFAEArgelsivgRKTIIFCDEIHRFTKTQQDVFL 243
                      5678**************9872567899999999999********8666677778888899999999999997655 PP

>> SKI  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   0.00028      0.19       2      26 ..     175     199 ..     174     216 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00028
                 TSSHHHHHHHHHHHHTSEEEEHHHH CS
         SKI   2 GaGKstvGkllAkklglefiDlDel 26 
                 G+GK+t+++ +A ++g +f+++ + 
  KHJ33915.1 175 GTGKTTIARCIASQVGSKFVEINST 199
                 9*******************98765 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00033      0.23       4      29 ..     167     196 ..     164     236 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00033
      AAA_24   4 kiliyGpsgiGKTtlakel....gpkplfi 29 
                 +++++G +g+GKTt+a+ +    g k++ i
  KHJ33915.1 167 SMILWGGAGTGKTTIARCIasqvGSKFVEI 196
                 689*************99877777777666 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00041      0.28       5      35 ..     169     199 ..     167     292 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00041
                 EEEE-TTSSHHHHHHHHHHHSSS-EEEEEHH CS
         CPT   5 lLnGgsssGKsslaralqevldepwlhlgvD 35 
                 +L Gg+ +GK+++ar++ +++   ++++++ 
  KHJ33915.1 169 ILWGGAGTGKTTIARCIASQVGSKFVEINST 199
                 899******************9999998765 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0    0.0008      0.55      13      51 ..     163     198 ..     154     201 .. 0.78
   2 ?   -3.1   0.0       5.6   3.9e+03      98     115 ..     288     305 ..     277     306 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0008
  Zeta_toxin  13 qerPklillgGqpGAGKselaellkdelerqgnvvrldp 51 
                 ++ P +il g + G GK+++a+ ++ ++  ++++v+++ 
  KHJ33915.1 163 DRVPSMILWG-GAGTGKTTIARCIASQV--GSKFVEINS 198
                 3556666655.579*************9..899999986 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 5.6
  Zeta_toxin  98 iivegtlrspdvvkklae 115
                  i+e++l + d ++++++
  KHJ33915.1 288 HIMERALTTLDHPQEIID 305
                 589999999998888776 PP

>> DUF3484  Membrane-attachment and polymerisation-promoting switch
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   4.6    0.0059       4.1      13      54 ..      69     123 ..      50     129 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0059
     DUF3484  13 etlrrqPvd.pq............vqenpqvqeqaqeqPvp.skeqeekepkkekl 54 
                 + +r+qPv+ +q            +++n ++++++qeq  + sk++e++e+kk kl
  KHJ33915.1  69 TSTRPQPVPsTQdtasltprkrpfNEPNYTPNDSYQEQTPDnSKDPEPSEKKK-KL 123
                 7899*****61456778888887755666666666666544579999999655.65 PP

>> KAR9  Yeast cortical protein KAR9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   8.1    0.0039       2.7     457     584 ..      17     139 ..       8     201 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0039
        KAR9 457 gslaerviasklkreSklPqiastleqtkrk....skipkasskkslllstpsktatsesptpasrkesrispppknrPrwnastntsDlevGhnfkpl 551
                 ++ + +++++    +S lP ++ ++++   +     + p+ ++++s++  t+ + +ts +p+p  +++  +s +p +rP       ++D      ++++
  KHJ33915.1  17 NAHIDSSCKTFTEPDSPLPLSQPNSKKA--SvstfFQTPAKRTASSTT--TKVELNTSTRPQPVPSTQDTASLTPRKRPFNEPNYTPND-----SYQEQ 106
                 5666777888888899999999999332..232244555554444444..445555555555555555555666678888888888999.....57888 PP

        KAR9 552 tlttpsapapsrssrssstlppvsPlerkksks 584
                 t+ + + p ps ++++ ++l+ v Pl++k+  s
  KHJ33915.1 107 TPDNSKDPEPSEKKKKLNNLEKVAPLAEKMRPS 139
                 9999999*******999********99988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       961  (0.0536003); expected 358.6 (0.02)
Passed bias filter:                      725  (0.0404373); expected 358.6 (0.02)
Passed Vit filter:                       124  (0.00691617); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 0.72u 0.30s 00:00:01.02 Elapsed: 00:00:00.46
# Mc/sec: 3513.28
//
Query:       KHJ33916.1  [L=1055]
Description: putative nuclear pore complex subunit nup85 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-20   72.5  11.3    7.2e-13   48.0   0.4    3.1  3  Nucleopor_Nup85  Nup85 Nucleoporin


Domain annotation for each model (and alignments):
>> Nucleopor_Nup85  Nup85 Nucleoporin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   1.5   1.4e-11   2.5e-07      51     223 ..     255     444 ..     228     465 .. 0.66
   2 !   48.0   0.4     4e-17   7.2e-13     242     511 ..     501     856 ..     487     887 .. 0.83
   3 ?   -0.8   0.1     0.024   4.3e+02     534     567 ..     908     940 ..     906     941 .. 0.94

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 1.4e-11
                      HHHHHHHHHHHHHHHHHHHHHHHHH............HHHHSS.............HHHHHHHHHH.HHHHHSSST......THHHHHHHHHHH CS
  Nucleopor_Nup85  51 lehsreyrsalralleeleeaieslee.......kslkeklek.............leeleliwnl.leilyfdkd......srstllesLleW 117
                       + +++  ++l  + +el +  e++++       +       +             +++++ i +l l+i y +k        + +l++ L+eW
       KHJ33916.1 255 ENENENLENILARVSDELVRLWETYNKqtlicrsE-------EytttlgpgpqapgFSKANFIASLtLRINYPKKItssftiREAKLPQTLIEW 341
                      33333344444444444444444443332222112.......1334456688888888888888873455555554776654599********* PP

                      HHTTS--..SHHHHHTTCCSS-CSSSSSGSHHHHHHHHHHHHTT-HHHHHHHHTTTTTTTHHHH..S-HHHHHHHHHHHHHHTT--SS...... CS
  Nucleopor_Nup85 118 vnrsdgefppseelieevleskeeeeveehpdfWklvnqlllrGlfdqavalLelsglleleef..ecevsnnlvedlielLkkmPvysveegl 209
                      + +   + +p  ++ ee+l++k   ++++h  fW+ v  +l+rG ++ ++ ++++ g+  ++    + ++  + +++  + L ++ +     ++
       KHJ33916.1 342 MDE---HHNPYPNQHEEILAHK--PSPSNHALFWDSVFNCLIRGKIKAVIDMINNAGWEYSKDVldNINNIDSQLNNSNATLTNVERAMDVAKH 430
                      ***...889**********955..89****************************9998655444234444444455555555555555333455 PP

                      ....-HHHHHHHHH CS
  Nucleopor_Nup85 210 slsefekkwreWks 223
                       l +   ++r W+s
       KHJ33916.1 431 ILMKCPATHRDWNS 444
                      55556666666655 PP

  == domain 2  score: 48.0 bits;  conditional E-value: 4e-17
                      HHHHHHHHHHHHHHT-HHHHHHT-SSHHHHHHHHHHHT--.............-THH.HHHHHHHHHS.......................... CS
  Nucleopor_Nup85 242 elrdnledllkilsGneskileysetWyellvglllYyiP.............tlkkleylqlsakkcl......................... 297
                       l +nl +l+ +l+G+ s il+ s++W e+ +gl+++ +                                                       
       KHJ33916.1 501 NLYQNLVTLYNLLMGDISTILANSQDWCEATIGLVIWWDEskkdqglilsrfhQ--------------Psrlsskystskffhqklrisfeaat 580
                      6789************************************44444444444440..............24455566666666666677777777 PP

                      ......---TTSTTHHHHHHHHTS--GGGHHHHHHH..HHHHHHHHHHHHHHTTSS.....-----....................S---SSST CS
  Nucleopor_Nup85 298 ......pedetneleqlclailegdilsvlkelesllddswfaahladLleakgll.....eeass....................eledlflr 360
                            +++++  ++ ++ ++++ d++sv+  l  ++++  ++  ++++   +g l     +   s                    +       
       KHJ33916.1 581 sdstdfQINSADDVQVALASLFQIDYESVIGFLRCWSGP--VSCGVVEIASLAGWLpraeeK---SlinmgsldqgdfellglthsT------- 662
                      88888999****************************555..888999999999***665430...2555666777777555555541....... PP

                      T.......HHHHHHHHHHHT............-TTTHHHHHHHHHS-S..HHHHHHHHHHGGG----SHHHHHHHHHHHHHHT-HHHHHHHHHH CS
  Nucleopor_Nup85 361 e.......yllleyasells............hkslWqvaigylslcp..segraaleelLprvpletnddiekllsiCaklkLpevaksicki 433
                                l+ ya+ l++            + s W+v+i +l      +   +++  +L ++ple+   ++kl  + +  +L++ a+s  + 
       KHJ33916.1 663 PksddikdKTLITYANNLSKrrelkssanpetKLSSWEVSIAILGRLDstELSVEIIRDFLDQFPLEDSSTVNKLWILLNSIGLTSHAESAAQR 756
                      044444448888999999987777777777666678********99997788999*************************************** PP

                      HHHHHHHHH.HHHHHHHHHHXXXXXXXHHHHHHHHHHHHHHHHH..XX....XXXXHHHH...................HHHHHHHHHHHHHHH CS
  Nucleopor_Nup85 434 lgqrllkeg.rlgeAltwfskagdielvkriawqlfeasllege..plsedlddnlgsai...................llsqrLsflakyreF 505
                       + +l  +  ++geAl+ ++ a++ + vk++ + l+ +sl +++  p  +dldd+l s +                   ll ++Ls +a++r+F
       KHJ33916.1 757 YADDLAGNShKYGEALYYYALAHNNTKVKNVLDLLISSSLAQSSayPSEKDLDDHLRSLLtnpqialteiatmdyeaarLLHSSLSGYATLRKF 850
                      ****99776489************************999999874467899*******99********************************** PP

                      XXXXXH CS
  Nucleopor_Nup85 506 yklyee 511
                      y l++e
       KHJ33916.1 851 YDLRDE 856
                      **9775 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.024
                      HHHHHHHHHHHHHXXXXX.XXXXHHHHHHHHHHH CS
  Nucleopor_Nup85 534 fwllLladllpllelkkdpllseeetlelleaLe 567
                      f+l Ll +++ +++ + d++l+++++ +ll a+e
       KHJ33916.1 908 FLLALLGEAIVFVN-QPDFILTVRQIETLLYAIE 940
                      999***********.99*************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1055 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1481  (0.0826036); expected 358.6 (0.02)
Passed bias filter:                      603  (0.0336327); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.87u 0.29s 00:00:01.15 Elapsed: 00:00:00.46
# Mc/sec: 6848.56
//
Query:       KHJ33917.1  [L=127]
Description: putative oleate-induced peroxisomal protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.9e-24   85.5   0.2    3.7e-24   85.2   0.2    1.1  1  SCP2          SCP-2 sterol transfer family
     0.0002   21.7   0.0    0.00029   21.1   0.0    1.3  1  Alkyl_sulf_C  Alkyl sulfatase C-terminal
     0.0003   21.1   0.0    0.00043   20.6   0.0    1.3  1  SCP2_2        Sterol carrier protein domain
  ------ inclusion threshold ------
      0.082   13.0   0.0       0.13   12.4   0.0    1.3  1  FGF           Fibroblast growth factor
       0.11   12.2   0.1       0.24   11.1   0.1    1.6  2  UPF0175       Uncharacterised protein family (UPF0175)


Domain annotation for each model (and alignments):
>> SCP2  SCP-2 sterol transfer family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2   0.2     1e-27   3.7e-24       2     101 .]      19     118 ..      17     118 .. 0.93

  Alignments for each domain:
  == domain 1  score: 85.2 bits;  conditional E-value: 1e-27
                 HHHHHHHHHHHHHHHHCCH-EEEEEEECTC.T...EEEEEETTSTEEESSCTTBS-SEEEEEEHHHHHHHHCTSS-HHHHHHTTSSEEEC-HHHHHHHH CS
        SCP2   2 nqllerlkdpekkealkklagvlrfdltdlkg...sltldlkegqldvaakdegkadvtlslsledllelaegklnpqkafmqgkLkieGDielaqkle 97 
                 n+l+++  ++e+k+a+k+ +++++f+lt++ g   s+++dlk+  ++v ++  +k+ vtlsls ed+ +l+ gk+npq++fm+g+L+++GDi++a +++
  KHJ33917.1  19 NALKAS--ESERKQAIKQANAIFAFKLTNASGeeqSWHIDLKK-DGEVRKGLGTKPTVTLSLSEEDFGKLIAGKANPQRMFMSGRLRVSGDIMKANAMQ 114
                 344444..77******************9999999*******9.9***99999********************************************** PP

                 HHHH CS
        SCP2  98 allk 101
                 ++lk
  KHJ33917.1 115 SILK 118
                 9986 PP

>> Alkyl_sulf_C  Alkyl sulfatase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0     8e-08   0.00029      46     117 ..      52     120 ..      28     123 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 8e-08
                   EEEEEEETTEEEE.ECT---TTSSEEEEE-HHHHHHHHTTSS-HHHHHHTTTEEEEE-TCHHHHHHCTB--- CS
  Alkyl_sulf_C  46 kyllrlsngvLthtrkaaqaddadltvtltreqLvalllgkatlgkevaagklkieGdaealakllslldef 117
                    +++ l+    +    +   +++++t++l+ e++ +l++gka+++ ++ +g+l ++Gd  + + + s+l+++
    KHJ33917.1  52 SWHIDLKKDGEVR---KGLGTKPTVTLSLSEEDFGKLIAGKANPQRMFMSGRLRVSGDIMKANAMQSILKKA 120
                   5555555433322...2233899*****************************************99999876 PP

>> SCP2_2  Sterol carrier protein domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   1.2e-07   0.00043      15      96 ..      36     117 ..      17     124 .. 0.74

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 1.2e-07
                 SEEEEEEEE-TTSGGGSEEEEEEEETTSEEEECSCE-SCE..EEEEHHHHHHHHTTSS-HHHHHHTTSSBSSHHHH..HHHHHHS CS
      SCP2_2  15 kgeltleveDpllpwnngrfrltiedgkgeevgkeeeada.dltldiqtLaqlllGyrsaseLarlgriegaeeal..atldalf 96 
                 ++ ++++++ +     ++ ++++ ++++ +++g ++ ++  +l+l+  ++++l++G + ++++   gr++ + +++  +++++++
  KHJ33917.1  36 NAIFAFKLTNAS--GEEQSWHIDLKKDGEVRKGLGT-KPTvTLSLSEEDFGKLIAGKANPQRMFMSGRLRVSGDIMkaNAMQSIL 117
                 666777777554..66778****9999998888777.55559****************************666543214445554 PP

>> FGF  Fibroblast growth factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   3.5e-05      0.13      84     118 ..      38      72 ..      18      77 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.5e-05
         FGF  84 YntyasakyksskrewyvglkkkGrpkrgkktkke 118
                   +++ ++ + +++ w++ lkk+G++++g  tk++
  KHJ33917.1  38 IFAFKLTNASGEEQSWHIDLKKDGEVRKGLGTKPT 72 
                 45566666667899****************99987 PP

>> UPF0175  Uncharacterised protein family (UPF0175)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   6.6e-05      0.24       3      38 ..      15      50 ..      14      84 .. 0.76
   2 ?   -2.9   0.0       1.6   5.7e+03      46      60 ..     109     123 ..     108     124 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6.6e-05
     UPF0175  3 dellqalklteeelerelrialAvklYeegrlSlgk 38
                d++ +alk +e+e ++ +++a A+ +++    S  +
  KHJ33917.1 15 DDINNALKASESERKQAIKQANAIFAFKLTNASGEE 50
                899************************988777655 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.6
     UPF0175  46 srveflelLarrgip 60 
                 + + ++ +L++ ++p
  KHJ33917.1 109 KANAMQSILKKAQAP 123
                 566788899887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       713  (0.039768); expected 358.6 (0.02)
Passed bias filter:                      520  (0.0290033); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 938.69
//
Query:       KHJ33918.1  [L=160]
Description: putative mitochondrial carrier protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.5e-26   90.6   0.0    5.4e-18   64.7   0.0    2.1  2  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.7   0.0     3e-22   5.4e-18       5      94 ..      10      95 ..       6      98 .. 0.92
   2 !   24.3   0.0   1.2e-09   2.2e-05       3      41 ..     120     158 ..     118     160 .] 0.91

  Alignments for each domain:
  == domain 1  score: 64.7 bits;  conditional E-value: 3e-22
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr  5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94
                  k ++aG l+g++  +v +P+d++K+rlqt+++s+ +    + l++l +++++eG++gly+G++p l++ +   ++ +++  +++ ll+
  KHJ33918.1 10 SHKAFVAGILSGITKLSVGHPFDTIKVRLQTAPSSQFS----GPLECLLQTVRKEGVLGLYKGATPPLVGWIFMDSILMGSLTFYRSLLK 95
                56889*****************************9866....49*********************************9999999888876 PP

  == domain 2  score: 24.3 bits;  conditional E-value: 1.2e-09
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSST CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkkssk 41 
                 l++l + +aG+lag   +++++P++ +K rlq+q k+ +
  KHJ33918.1 120 LPPLGHGIAGLLAGFSVSFFAAPIEHIKSRLQVQYKEFT 158
                 6889999***************************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       306  (0.0170673); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1263.40
//
Query:       KHJ33919.1  [L=122]
Description: hypothetical protein EV44_g6098 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 987.62
//
Query:       KHJ33920.1  [L=415]
Description: putative gtp-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.4e-36  123.6   0.0      1e-35  122.7   0.0    1.5  1  MMR_HSR1_C      GTPase of unknown function C-terminal
      7e-17   61.5   0.0    1.7e-16   60.3   0.0    1.7  1  MMR_HSR1        50S ribosome-binding GTPase
    1.1e-05   25.0   0.0    0.00019   21.0   0.0    2.4  2  FeoB_N          Ferrous iron transport protein B
     0.0077   16.5   0.2      0.016   15.5   0.2    1.4  1  DUF356          Protein of unknown function (DUF356)
  ------ inclusion threshold ------
      0.019   14.5   0.1        2.9    7.4   0.0    2.5  2  GTP_EFTU        Elongation factor Tu GTP binding domain
      0.038   14.0   0.6       0.16   12.0   0.3    2.2  3  Dynamin_N       Dynamin family
       0.12   11.8   0.0        0.3   10.5   0.0    1.7  1  KTI12           Chromatin associated protein KTI12
       0.15   12.0   0.0       0.28   11.1   0.0    1.4  1  Ploopntkinase3  P-loop Nucleotide Kinase3
       0.22   11.4   0.7        8.3    6.3   0.1    2.4  2  RsgA_GTPase     RsgA GTPase


Domain annotation for each model (and alignments):
>> MMR_HSR1_C  GTPase of unknown function C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.7   0.0   5.1e-39     1e-35       1     112 []     224     343 ..     224     343 .. 0.98

  Alignments for each domain:
  == domain 1  score: 122.7 bits;  conditional E-value: 5.1e-39
  MMR_HSR1_C   1 alNKaDlpaadenieklkekypkdkkvvpvsAaaElaLrkaakqglikYepgdedfeiked..........klkeldekqkkaLekirdlvlkrygsTG 89 
                 alNK+D+p+a +ni+k+++ ++ ++ +v++sA +E++Lrk++kqg+++Y++g+e +++ked          +lk+ldek+++++e+i+d+vl+r+gsTG
  KHJ33920.1 224 ALNKIDHPDAGKNISKIMKIHDPKT-IVLCSAIMEVFLRKLNKQGYVRYTEGSEYVQTKEDlieegdpnggNLKDLDEKLQARVENIKDMVLYRFGSTG 321
                 89******************99888.*********************************************99************************** PP

  MMR_HSR1_C  90 VqealnaavfelldlivVYPVed 112
                 V++al++a  ell+l++V+PV++
  KHJ33920.1 322 VVQALSRAA-ELLGLVPVFPVRN 343
                 *********.***********97 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.3   0.0   8.4e-20   1.7e-16       2      87 ..       7     126 ..       6     157 .. 0.75

  Alignments for each domain:
  == domain 1  score: 60.3 bits;  conditional E-value: 8.4e-20
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEET.......TEE....................EEEEECGGCSSHHHHHHHHHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklk.......gke....................ielvDtpGliegaseekglgkaflal 73 
                 +++vG+p +GKSt +n+lt++ ++v+  p+tT+d++++   l+         +                    iel+D++Gl+ ga+e++glg++fl+ 
  KHJ33920.1   7 IGLVGKPSSGKSTTLNSLTDASSKVG--PFTTIDPQRAIGYLQidcackrY-DlsdrckpnygscvdgrrsvpIELLDVAGLVPGAHEGRGLGNKFLDD 102
                 89******************999996..9******9997663322334440.044445555555555555666********999**************8 PP

                 HC.TSEEEEEEETT.........T CS
    MMR_HSR1  74 ee.adlillvvdas.........e 87 
                  + ad++++vvd+s         +
  KHJ33920.1 103 LRhADALIHVVDVSgttdaegksT 126
                 8879********886655544432 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   9.6e-08   0.00019       3      43 ..       7      47 ..       6      59 .. 0.83
   2 ?    1.0   0.0      0.14   2.7e+02     101     119 ..     214     232 ..     200     249 .. 0.82

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 9.6e-08
                EEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEEEEEE CS
      FeoB_N  3 valvGnpnvGkttlfnaltgakqkvgNwpGvtvekkegklk 43
                + lvG+p +Gk+t +n+lt+a++kvg ++ +  +++ g+l+
  KHJ33920.1  7 IGLVGKPSSGKSTTLNSLTDASSKVGPFTTIDPQRAIGYLQ 47
                679***********************999877666666665 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.14
                 HHHTTSSEEEEEETHHHHH CS
      FeoB_N 101 llelgvpvvlalnmideae 119
                  ++ + p+v+aln+id+ +
  KHJ33920.1 214 FIDEKFPTVIALNKIDHPD 232
                 5677899********9754 PP

>> DUF356  Protein of unknown function (DUF356)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.2   7.9e-06     0.016      41      94 ..     205     260 ..     193     270 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 7.9e-06
      DUF356  41 kilekvlkeelkkkvk.vaalvevee.datkaisklrkiHPPaHvvvvseeydeye 94 
                 +i++kv+++ + +k+  v al ++++ da+k isk++kiH P  +v+ s   +++ 
  KHJ33920.1 205 DIITKVVESFIDEKFPtVIALNKIDHpDAGKNISKIMKIHDPKTIVLCSAIMEVFL 260
                 566777777777776415678899874789*******************9998874 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.011        22       6      31 ..       7      32 ..       4      47 .. 0.86
   2 ?    7.4   0.0    0.0015       2.9     113     142 ..     209     240 ..     204     333 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.011
                EEEEESTTSSHHHHHHHHHHHTTSSC CS
    GTP_EFTU  6 igiighvDhGKtTLtdrLlyktgais 31
                ig++g   +GK+T++ +L+ +++++ 
  KHJ33920.1  7 IGLVGKPSSGKSTTLNSLTDASSKVG 32
                78999999**********98887765 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0015
                 HHHHHHHHTTTEEEEEEESCGST..HHHHHHH CS
    GTP_EFTU 113 evlrlalkegvpiivfiNKmDrl..kaelkei 142
                 +v++  ++e+ p+++++NK+D++  ++++++i
  KHJ33920.1 209 KVVESFIDEKFPTVIALNKIDHPdaGKNISKI 240
                 677888999*************9664444444 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.3   8.1e-05      0.16       1      21 [.       7      27 ..       7      36 .. 0.85
   2 ?   -2.1   0.0       1.8   3.6e+03     105     139 ..      79     116 ..      74     147 .. 0.66
   3 ?   -3.0   0.0       3.3   6.6e+03     120     157 ..     209     247 ..     201     252 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 8.1e-05
                EEEEEBTTTTHHHHHHHHHTS CS
   Dynamin_N  1 iavvGsqSsGKSSvlnaLlge 21
                i +vG+ SsGKS+ ln+L+ +
  KHJ33920.1  7 IGLVGKPSSGKSTTLNSLTDA 27
                789***************876 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.8
                 EEE---B-SSSGTTS...HHHHHHHSTTEEEEEEEETT CS
   Dynamin_N 105 lvDlPGldsvnkrdq...elvkeyikkadiilavtsan 139
                 l+D+ Gl   +++     +     +++ad++++v++ +
  KHJ33920.1  79 LLDVAGLVPGAHEGRglgNKFLDDLRHADALIHVVDVS 116
                 55655555555555544444444556777777777654 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 3.3
                 HHHHHHH.STTEEEEEEEETTS-CCC-CHHHHHHHHSTT CS
   Dynamin_N 120 elvkeyi.kkadiilavtsanhdlsnsealflarevdpk 157
                 ++v+++i +k   ++a+ + +h  + ++ +++ +  dpk
  KHJ33920.1 209 KVVESFIdEKFPTVIALNKIDHPDAGKNISKIMKIHDPK 247
                 677888877778888888888888877777777777766 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00015       0.3       2      27 ..       5      30 ..       4      59 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00015
                .EEEEE--TTSSHHHHHHHHHHHHHH CS
       KTI12  2 pLvvltGlPssGKstrakeLakalee 27
                pL+ l G PssGKst  + L +a ++
  KHJ33920.1  5 PLIGLVGKPSSGKSTTLNSLTDASSK 30
                9***************9999887655 PP

>> Ploopntkinase3  P-loop Nucleotide Kinase3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00014      0.28       5      28 ..       6      29 ..       2      40 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00014
  Ploopntkinase3  5 liylvGqPGaGkstlmaeltkgfd 28
                    li lvG+P +Gkst + +lt++ +
      KHJ33920.1  6 LIGLVGKPSSGKSTTLNSLTDASS 29
                    899*****************9765 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.1     0.047        94     103     122 ..       8      27 ..       3      37 .. 0.81
   2 ?    6.3   0.1    0.0042       8.3      29      72 ..     201     244 ..     192     266 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.047
                  EEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 103 vlvGqSGvGKStLinallpe 122
                   lvG+   GKSt +n+l+  
   KHJ33920.1   8 GLVGKPSSGKSTTLNSLTDA 27 
                  58999999*********976 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0042
                  T--HHHHHHHHHHHHHTT-EEEEEEE-GGG--HHHHHHHHHHHH CS
  RsgA_GTPase  29 elslnlldrfLvlaeekgiepvivlnKiDlleeeeeleelkeel 72 
                  + +++++++++  + +++ + vi+lnKiD  +  ++++++++  
   KHJ33920.1 201 QWTPDIITKVVESFIDEKFPTVIALNKIDHPDAGKNISKIMKIH 244
                  567789999999999***************99999777777654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       645  (0.0359752); expected 358.6 (0.02)
Passed bias filter:                      622  (0.0346924); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.54u 0.21s 00:00:00.75 Elapsed: 00:00:00.38
# Mc/sec: 3264.39
//
Query:       KHJ33921.1  [L=97]
Description: putative mitochondrial carrier [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.9e-15   55.5   0.0    4.3e-15   55.4   0.0    1.0  1  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.4   0.0   2.4e-19   4.3e-15       8      93 ..       3      96 ..       1      97 [] 0.95

  Alignments for each domain:
  == domain 1  score: 55.4 bits;  conditional E-value: 2.4e-19
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS........HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr  8 ellaGglagavatlvttPldvvKtrlqtqkksskksksaa........ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93
                ++ aGgl++ + +++ +P dvvK r++t++  ++ +  ++         +++ + ++ e G +g +rG+lp +lr +pa+a+ ++++e + r l
  KHJ33921.1  3 NFYAGGLSAQIFWCFSYPSDVVKQRIMTDPLGGTLRDGKPrwlgwgsgWWNAARGVLAESGYKGYWRGFLPCFLRAFPANAMAMATFEAVMRSL 96
                899****************************99998888899***********************************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       234  (0.0130515); expected 358.6 (0.02)
Passed bias filter:                      191  (0.0106531); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 775.35
//
Query:       KHJ33922.1  [L=382]
Description: putative isocitrate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-99  332.8   0.0      3e-99  332.5   0.0    1.0  1  Iso_dh    Isocitrate/isopropylmalate dehydrogenase
  ------ inclusion threshold ------
       0.15   12.2   0.0        0.5   10.5   0.0    1.8  2  HHH_2     Helix-hairpin-helix motif


Domain annotation for each model (and alignments):
>> Iso_dh  Isocitrate/isopropylmalate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  332.5   0.0  3.3e-103     3e-99       2     348 .]      54     378 ..      53     378 .. 0.95

  Alignments for each domain:
  == domain 1  score: 332.5 bits;  conditional E-value: 3.3e-103
                 EEEEEESTTHHHHHHHHHHHHHHHHHHHT-EEEEEE---THHHHHHHSSSS-HHHHHHHHHSSEEEEEE---CSSSSSSHHHHHHHHHHHTTEEEEEEE CS
      Iso_dh   2 iallegdgiGpevveaalkvlkaakekaglelefeevdvGgaaidetgeplpeetleaikeadvvllgavgtpkekevrpengLlaLrkeldlfanlrp 100
                 ++l+egdgiGpe++++++++++aak  a+  +++e vdv  +  d  ++ +p et+ +i++++v+l+g++ tp +k++ + n  l+Lr++++lfan+rp
  KHJ33922.1  54 VSLIEGDGIGPEISQSVKDIFEAAK--AP--IKWEPVDVTPQIKDG-KTCIPSETIRSIERNKVALKGPLATPIGKGHVSLN--LTLRRTFNLFANVRP 145
                 789********************99..55..99******9887776.9**********************************..88************* PP

                 EE-BCCTTCCSSBTHHHHCT-EEEEEEE-SSCGGCSSEEEEETTG.GGGEEEEEEEEEHHHHHHHHHHHHHHHHHTTTSEEEEEESTTTTHHHH.HHHH CS
      Iso_dh 101 vkvfeklkvksplkrevveevdlvivReltggiYfgeekekkgsifteevavdtklyseeeieriaraafelAlkrgkkkvtlvdKanvlksse.lwrk 198
                 ++++   ++k+p+ +     vd  ++Re+t+g Y+g+e+   +      v++++kl++e+++er+ r+af+ A++ g+ kv +v+Ka+++k+s+ l+  
  KHJ33922.1 146 CRSI--SGYKTPYDN-----VDTFLIRENTEGEYSGIEHIVVDG-----VVQSIKLITEKASERVLRYAFQHAERIGRPKVRVVHKATIMKMSDgLFLA 232
                 ****..889999986.....9********************997.....8********************************************66666 PP

                 HHHHHHCCTTTTSEEEEEEHHHHHHHHHHSGGGGS..EEEE-HHHHHHHHHHHHHHTTSGCC-EEEEEETSS-EEEEESS---CCCTTSS-S-THHHHH CS
      Iso_dh 199 iveevaeeeypdielehqlvDsaamqlvkspkqfd..VivtkNlfGDilSDeaaalvGslGllpSaslgekkvaifEavHGsapdiagkdkaNpiavil 295
                 ++e+v + e+p+ie++ +l+D++++++v++p+ ++  V+v++Nl+GDilSD++a l+G+lGl+pS ++g +k  ifEavHGsapdiagk  aNp+a +l
  KHJ33922.1 233 TAERVSK-EFPNIEFDAELLDNTCLKIVTDPTPYNdkVLVMPNLYGDILSDMCAGLIGGLGLTPSGNIG-DKCSIFEAVHGSAPDIAGKALANPTALLL 329
                 6666666.***********************777669********************************.79*************************** PP

                 HHHHHHHHTTT-HHHHHHHHHHHHHHHHH.TSCCHHHCTTSTCCCHHHHHHHHH CS
      Iso_dh 296 SaalmLryslgleeaAdkiekAvekvlea.givTkDlageaakevstsefgdav 348
                 S  +mLr+ ++le  A+kiekA+ k+l++ + +T+Dl+g+a    +t+e+ +a+
  KHJ33922.1 330 SSIMMLRH-MELESYAQKIEKAIFKTLAEgKSLTGDLGGKA----KTHEYAEAI 378
                 ********.********************8899********....999998886 PP

>> HHH_2  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   5.5e-05       0.5      37      59 ..      56      78 ..      53      80 .. 0.87
   2 ?   -3.1   0.0      0.98   8.8e+03      15      27 ..     233     245 ..     232     245 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 5.5e-05
       HHH_2 37 LlevddiGeeiAqsivefFenek 59
                L+e d+iG+ei+qs+++ Fe  k
  KHJ33922.1 56 LIEGDGIGPEISQSVKDIFEAAK 78
                77779**************9765 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.98
       HHH_2  15 tAklLakrFksld 27 
                 tA+   k+F +++
  KHJ33922.1 233 TAERVSKEFPNIE 245
                 8999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       360  (0.0200792); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.16s 00:00:00.64 Elapsed: 00:00:00.34
# Mc/sec: 3343.01
//
Query:       KHJ33923.1  [L=1036]
Description: putative exocyst complex component sec5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.6e-39  133.2   0.1    9.6e-39  133.2   0.1    3.3  5  Sec5      Exocyst complex component Sec5
    1.1e-05   25.4   4.3    6.2e-05   23.0   0.1    3.7  3  Vps51     Vps51/Vps67
  ------ inclusion threshold ------
      0.086   13.2   0.3        2.2    8.7   0.1    3.0  2  ACDC      AP2-coincident C-terminal


Domain annotation for each model (and alignments):
>> Sec5  Exocyst complex component Sec5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.2   0.1   1.6e-42   9.6e-39       2     190 .]     155     406 ..     154     406 .. 0.87
   2 ?   -1.7   0.1      0.36   2.2e+03      36      71 ..     419     454 ..     409     462 .. 0.74
   3 ?   -2.7   0.1      0.73   4.3e+03     136     166 ..     509     539 ..     496     551 .. 0.57
   4 ?   -2.7   0.0      0.75   4.5e+03     127     144 ..     839     856 ..     822     891 .. 0.72
   5 ?   -2.2   0.1      0.49     3e+03     146     158 ..     970     982 ..     896    1014 .. 0.63

  Alignments for each domain:
  == domain 1  score: 133.2 bits;  conditional E-value: 1.6e-42
        Sec5   2 eelkslvksnftkfvkvkdtldqiykef.......................seskteaqed.............................slveeLees 48 
                   lk lv+snf++fv++k+t+d++yke+                       +                                      ++v  ++++
  KHJ33923.1 155 ASLKVLVESNFERFVRAKATIDNVYKEMkyrgedstpnltrprthsrhtsrN--------SfrtssnnqvttlsnvsdlkkknallkeseYGVLGIKSQ 245
                 579*************************666666666666666665555551........044445555666666666666667777777********* PP

        Sec5  49 lneairkttllfkpvlenkekadklraaleviernkflFnLPksLkesiakgdydklindYkkakslfestrqslv........eedkkqvkvfkkvws 139
                 l ++ +k++++  p l   ek+++lr +++ +e++k++  +++sL++si+++dyd +++ Y+ ak+   + ++ ++        + ++ q+ ++  vws
  KHJ33923.1 246 LLDVSAKAEEVWGPALGGHEKENNLRLMTSSMEQFKEFYLVSGSLSKSIKRKDYDAILDKYSTAKRFALEAKNLSErlstssatDLQIFQILLAAHVWS 344
                 *************************************************************8888887777665557787777888899999999**** PP

        Sec5 140 evekiieeyrkklwekLleld...........esqeeflkliskLleLeveedPiwdflesq 190
                  v++++e++++++w+kL++++           +++++++++i+ LleL+v+e+Piw++l+s+
  KHJ33923.1 345 NVQELVEDLKREIWRKLISTQssslrrssgssDTRDQHMDCIEFLLELGVSENPIWVWLSSR 406
                 ***********************************************************986 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.36
        Sec5  36 aqedslveeLeeslneairkttllfkpvlenkekad 71 
                 +q +  +e L+  l++a++ t +++ p l++ ++  
  KHJ33923.1 419 DQYKVEIEILRRRLSNAKKPTAQVIAPYLKSLRRHT 454
                 44556788999999*******999999888766554 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 0.73
        Sec5 136 kvwsevekiieeyrkklwekLleldesqeef 166
                 + +++ +k  ++y++   ++Llel++  +e 
  KHJ33923.1 509 RLLTKLNKDLSQYQQFSEKELLELQKGIHEL 539
                 4555555566666666666666666433333 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 0.75
        Sec5 127 dkkqvkvfkkvwseveki 144
                    +++++++v+++++++
  KHJ33923.1 839 LTDESNIIRDVLNQIDTR 856
                 456778888888888875 PP

  == domain 5  score: -2.2 bits;  conditional E-value: 0.49
        Sec5 146 eeyrkklwekLle 158
                 ++++++++++L +
  KHJ33923.1 970 SDIQSQIYQELDK 982
                 3333333333322 PP

>> Vps51  Vps51/Vps67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.1     1e-08   6.2e-05       1      68 [.     116     183 ..     116     197 .. 0.94
   2 ?   -1.9   0.2      0.62   3.7e+03      14      45 ..     321     356 ..     315     371 .. 0.63
   3 ?    1.5   0.1     0.055   3.3e+02      26      48 ..     956     978 ..     937     980 .. 0.86

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 1e-08
       Vps51   1 ldspdfdaeayvrellakstlkellkveasllseiraldselkalVydnYskLisasdtIrkmksemd 68 
                 l+s  f+++ +++++ +++t ++ll+  + l ++i ++ ++lk lV  n ++++ a  tI +  +em+
  KHJ33923.1 116 LSSTTFSPSLFLSQVHSTATTQDLLEGLEILSQSIDQKSASLKVLVESNFERFVRAKATIDNVYKEMK 183
                 57889*********************************************************999995 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.62
       Vps51  14 ellakstlkellkveasll....seiraldselkal 45 
                 e+l++s+  +l+ ++  l     s+ ++l ++lk+ 
  KHJ33923.1 321 ERLSTSSATDLQIFQILLAahvwSNVQELVEDLKRE 356
                 566666666666666666655555556666666553 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.055
       Vps51  26 kveasllseiraldselkalVyd 48 
                  + ++l++ +++  s++++++y+
  KHJ33923.1 956 FISQTLTQYNTDRASDIQSQIYQ 978
                 5678999***************8 PP

>> ACDC  AP2-coincident C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.11   6.5e+02      30      68 ..     412     452 ..     349     458 .. 0.81
   2 ?    8.7   0.1   0.00036       2.2      18      83 ..     819     886 ..     815     889 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.11
        ACDC  30 lanktsskelkrvieahikyvenaksl..kelqpylklFst 68 
                 ++ +++s+++k  ie + ++ +nak++  + + pylk +++
  KHJ33923.1 412 NKIQCTSDQYKVEIEILRRRLSNAKKPtaQVIAPYLKSLRR 452
                 33344559999999999999999998633679999988766 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00036
        ACDC  18 Llnnclpqlasslanktss..kelkrvieahikyvenakslkelqpylklFstcilknklPSqlslee 83 
                 L+n +lp+l  +++n+ +    + +++i+  ++ ++     +++qpy++ +++ i++++++ +++l+e
  KHJ33923.1 819 LFNEVLPNLVAQFENAFAVklTDESNIIRDVLNQIDTRLFSSFIQPYVENLRRTIRAGITSLSQPLTE 886
                 78899999999999997667788899***********************************9999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1036 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1022  (0.0570026); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.80u 0.28s 00:00:01.08 Elapsed: 00:00:00.45
# Mc/sec: 6918.28
//
Query:       KHJ33924.1  [L=816]
Description: putative glycoside hydrolase family 92 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   7.6e-143  476.8   0.1   9.1e-143  476.5   0.1    1.1  1  Glyco_hydro_92   Glycosyl hydrolase family 92
    2.5e-62  210.9   0.2    3.9e-62  210.3   0.2    1.3  1  Glyco_hydro_92N  Glycosyl hydrolase family 92 N-terminal doma
  ------ inclusion threshold ------
      0.024   14.8   0.0        1.3    9.1   0.0    2.9  3  DUF4990          Domain of unknown function


Domain annotation for each model (and alignments):
>> Glyco_hydro_92  Glycosyl hydrolase family 92
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  476.5   0.1  1.5e-146  9.1e-143       1     461 [.     277     769 ..     277     770 .. 0.91

  Alignments for each domain:
  == domain 1  score: 476.5 bits;  conditional E-value: 1.5e-146
                     HHHHHHHHHTTT--HHHHHHHHHHHHHHHHTTEEEESS..-HHHHHHHHHHHHHHTTSSEE--EE-TT......E-TTTSSEEE.S--EESEEHH CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_92   1 qArknleaEipdldfekvraaareaWnekLskievegg..tedqkttFYtalYhallapneysdvdge......YsglddkvhkegksYttfslW 87 
                     qA++ +e+Eipd+df k++++a++ W++k+s i+v+++  +++ +++FY+++Y+++++p+++++ +        Y+  d++       Y    +W
      KHJ33924.1 277 QACSSAEREIPDFDFTKTKTKAEDIWRTKMSPITVDSTgvDSSYLKNFYSGIYRTMVNPQDLTGENPLwqsdepYF--DSF-------YC---IW 359
                     8**********************************88435999*********************666633333333..333.......64...8* PP

                     HHTTTHHHHHHHH-HHHHHHHHHHHHHHHHHHSS--SEESSS.B---S-S-THHHHHHHHHHTT-.--S-HHHHHHHHHHHHHB-S-TT.TBTTT CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_92  88 DtyRaqhplltlldperasdmvrslldiykeggwlpdwrlsnsetavmgGsnadvvladayvkgi.rdfdvekayealvkdaeeepeaadkerrg 181
                     D +R+q+p+l ++dpe +++ +rsl+d+y+ +g+lpd+r+s +++ ++gGsnadvvladay+k+i +d+d e+ yea+ kdae+ep +++ e+rg
      KHJ33924.1 360 DLFRSQLPFLIIVDPEVVAKQIRSLIDTYRYEGYLPDCRMSLCKGLTQGGSNADVVLADAYIKNIvQDIDWETGYEAVIKDAEVEPFDWCCEGRG 454
                     ******************************66********************************64799999**************777877777 PP

                     .HHHHHHHSS--T........TT.TTHHHHHHHHHHHHHHHHHHHHHTT-H.HH.HHHHTTGGGGGGGEETT......................T CS
                     .xxxxxxxxxxxx......xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxx......................x RF
  Glyco_hydro_92 182 .lesylklgYvpa......kede.sesvsrtlEyaydDfaiaqlAkalgkk.edaekylkrsknwrnlfdpe......................t 245
                      l+s++klgY+p       + +  ++s+srtlEy+y+Df+ia l +a+g k +d+eky +rs nw+n+f+++                       
      KHJ33924.1 455 gLDSWKKLGYIPVqdfdykGFGTiTRSISRTLEYSYNDFTIAVLGNAIGGKtTDVEKYIERSGNWKNIFKEDqesiwykfdkltnqtnitdtgfI 549
                     7****************9766667************************9877******************************************* PP

                     TCE--B-TTS-B-SS--TT--................STTSSSS-HHHHTT--TT-HHHHHHHHTSHHHHHHHHHHHS----TTGHHHHHHHTSS CS
                     xxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_92 246 gfmrprnadGtwaepfdpsedp...............eegftEgnawqysffvphDvagLielmGGkeafvkrLdslfeeeekksedsaglsgqy 325
                     gf++prn +Gt+    dp + +                 +  E++ w+ysf+vphD a+Li+++GG+++f+krLd+l++            ++++
      KHJ33924.1 550 GFFQPRNLNGTYS-FQDPLKCSnvdtnssvcslqnnaV-ETYESSIWEYSFYVPHDQATLISKFGGPDSFAKRLDYLHD------------NNIT 630
                     ***********98.22344433788999*****97531.345*************************************............789* PP

                     -TT-GGGTTGGGGGGGTT-HHHHHHHHHHHHHHSB-SSTT-BSSTTTSSTTHHHHHHHHHTEE-SSTTS-EEEE---SSSEEEEE-.GGG-EEEE CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx RF
  Glyco_hydro_92 326 dhgNEpsfhtpylYnyagapwktqervreildelynntpdGlpGndDaGqmsawyvfsalGlYpvapgspeyllgsPlfekvtirl.engktlti 419
                     ++gNEpsf t+++Y+yag+p++++ r++ +++ +++ tpdGlpGndD+G+m+++++fs++Gl+p  pg+++yl+++P+f++v+i+   +gkt+ti
      KHJ33924.1 631 YIGNEPSFLTVFQYHYAGRPALSAIRSHFYIPAFFQITPDGLPGNDDSGAMGSFVAFSMMGLFPN-PGQDVYLITPPFFQSVSITSpLTGKTATI 724
                     *****************************************************************.********************899****** PP

                     E-TT-..BTTB-EEEEEEETTEE---.EEEHHHHHT-EEEEEEEE CS
                     xxxxx..xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_92 420 eaknn..saenvyvqsvtlnGkplkk.wlthediakGgtLefelg 461
                     +  n   + +n+y+qs+tlnG+ ++k w++h+ +++G++L ++lg
      KHJ33924.1 725 KNINFdpTYKNIYIQSATLNGEIYTKnWIDHSFFTEGKELILTLG 769
                     774444333688************666***************997 PP

>> Glyco_hydro_92N  Glycosyl hydrolase family 92 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.3   0.2   6.5e-66   3.9e-62       1     237 []      25     271 ..      25     271 .. 0.92

  Alignments for each domain:
  == domain 1  score: 210.3 bits;  conditional E-value: 6.5e-66
  Glyco_hydro_92N   1 yVnpliGTgggghtfpgatlPfGmvklspdtrenwdsqagYeyddssitgFshthlsGtggg.dlgdvslmPttgevkldpgkkkkdkeeyrsr 93 
                      yV+ liG+++gg++fpgatlP+Gm+k+++dt+ + ++q+g++ d+s+itgFs +h+sGtgg+ +lg+++l+P+tg+ + d +++  +k++++++
       KHJ33924.1  25 YVDQLIGSSNGGNIFPGATLPYGMAKAVADTN-SPSNQGGFTLDNSNITGFSSLHDSGTGGApSLGNFALFPHTGCKEDDVQECVYSKKARATP 117
                      9*******************************.9************************************************************ PP

  Glyco_hydro_92N  94 fskedetaspgyYsvtlddygikaelTateragllrftFpkgkean...ilvdlsdslssdkvsngsikv.vddreisGyrtsrg.fglagsyk 182
                      f +++ +aspgy++++l + gi+ae+T++++++l+rf+Fp++++++   il+dl+d  s+++++ng+i+v +++++++G++++ + fg  g+y 
       KHJ33924.1 118 FLNSSVKASPGYFALDLVS-GIEAEMTTAHHTSLFRFKFPSSSSNEsplILMDLTDL-SDSRQNNGTISVdTNTGRMTGSARFLPsFG-VGNYI 208
                      *******************.********************955443445******96.56789**********************999.***** PP

  Glyco_hydro_92N 183 vYfvarfs.kpfksfgvwkggevt......egaksasgk........elgayvsFdtkegetvevrvGiS 237
                      +Yf+a+f   ++++ g++ +g+ +      +       +        + ga+++F + ++e+v++rvG+S
       KHJ33924.1 209 AYFCADFTgSTMRDNGIFVDGRASadvkdlTI------SrsingypiPGGAFIRFLP-RTESVLARVGVS 271
                      ********889*******77777744444433......23344557799********.***********9 PP

>> DUF4990  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00022       1.3      21      88 ..     162     231 ..     152     240 .. 0.84
   2 ?    1.8   0.0      0.04   2.4e+02      37      78 ..     281     322 ..     256     328 .. 0.70
   3 ?   -2.1   0.0      0.63   3.7e+03      47      91 ..     534     578 ..     530     600 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00022
                 GGGBSB--GGGGGS---TTS---.---BT-B-HHHH.HHSTT-STTXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF4990  21 eadfisleeaelmrdrkadGdlP.didflkltadsk.lrnkGlGcfitkenedldfdWlekaaiavegni 88 
                 e+ +i ++ ++l  +r+ +G++  d + +++t +++ l   G+G +i+    d   + +++  i v+g  
  KHJ33924.1 162 ESPLILMDLTDLSDSRQNNGTISvDTNTGRMTGSARfLPSFGVGNYIAYFCADFTGSTMRDNGIFVDGRA 231
                 556788999************965********999747899******99999999999999999988865 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.04
                 -TTS------BT-B-HHHHHHS.TT-STTXXXXXXXXXXXXXX CS
     DUF4990  37 kadGdlPdidflkltadsklrn.kGlGcfitkenedldfdWle 78 
                  a+ ++Pd df k +++++    + +   it +++ +d ++l+
  KHJ33924.1 281 SAEREIPDFDFTKTKTKAEDIWrTKMSP-ITVDSTGVDSSYLK 322
                 578899*********9997443034443.66666666666665 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.63
                 BT-B-HHHHHHSTT-STTXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF4990  47 flkltadsklrnkGlGcfitkenedldfdWlekaaiavegniasv 91 
                 f klt ++++  +G+ +f    n +  +++ +      ++  +sv
  KHJ33924.1 534 FDKLTNQTNITDTGFIGFFQPRNLNGTYSFQDPLKCSNVDTNSSV 578
                 888999999999998888887777777766554444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (816 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       457  (0.0254894); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.46
# Mc/sec: 5306.88
//
Query:       KHJ33925.1  [L=371]
Description: putative dash complex subunit ask1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-19   69.4   1.2      3e-19   68.6   0.4    1.8  2  DASH_Ask1  DASH complex subunit Ask1
  ------ inclusion threshold ------
        1.4    9.5   5.6         10    6.8   0.6    2.4  2  Pex14_N    Peroxisomal membrane anchor protein (Pex14p) conse


Domain annotation for each model (and alignments):
>> DASH_Ask1  DASH complex subunit Ask1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.6   0.4   3.4e-23     3e-19      14      64 .]       5      55 ..       4      55 .. 0.98
   2 ?   -4.0   0.0       1.6   1.4e+04      37      52 ..     115     130 ..     114     131 .. 0.76

  Alignments for each domain:
  == domain 1  score: 68.6 bits;  conditional E-value: 3.4e-23
   DASH_Ask1 14 eIDanlsrcfriitkkilPavkrYgeasekiwesakfwksffeqsAnveLs 64
                eID+n+sr+++i++++ilP v++Y+++s  +we ++fwk++fe+sAnv+Ls
  KHJ33925.1  5 EIDHNFSRAHAIVNSSILPIVEKYAQHSIAVWEGSQFWKKIFEASANVSLS 55
                8************************************************96 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 1.6
   DASH_Ask1  37 Ygeasekiwesakfwk 52 
                 + +++ +++es + wk
  KHJ33925.1 115 FTQSTPRVSESDRTWK 130
                 5677888888888887 PP

>> Pex14_N  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.5    0.0034        31      64     136 ..      59     137 ..       1     176 [. 0.67
   2 ?    6.8   0.6    0.0011        10      68     143 ..     273     350 ..     237     355 .. 0.54

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.0034
     Pex14_N  64 eqa..qeesasssatpqpqaasqtsqsspspsppaqqqqqqyrpPivtypefltkppkppppPlr.....twrdllitat 136
                 e +  ++e+ +s ++p+++a+++t  +s s ++++ ++++   +P      fl ++  ++ +P++     tw+d  ++ +
  KHJ33925.1  59 E-QndHNENLTSVHSPENTAKYTTGLTSVSDDEKHYSAKEDESEPHDDADSFLGHTDFTQSTPRVsesdrTWKDTHHMEY 137
                 2.123455555555555555544443333333333333333368888888888887777778877777779999988866 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0011
     Pex14_N  68 eesasssatpqpqaasqtsqsspspsppaqqqqqqy.........rpPivtypefltkppkppppPlrtwrdllitatalaglga 143
                 +++ ++s++++++++s+++ s++s s++                  +P  t + +l +++  + p +   ++++  + a+ag+g+
  KHJ33925.1 273 RTPVKTSPENSATKPSKNEISWESDSEE-------DaegiyrelgMSPPKTIQFILPQSKILQTPAREASQRIVQDLLATAGVGF 350
                 2222223333333333333333333322.......02233455777777887555555555555666667777778888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2822.12
//
Query:       KHJ33926.1  [L=89]
Description: hypothetical protein EV44_g3725 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.013   15.0   0.0      0.014   15.0   0.0    1.0  1  PP_kinase_C_1  Polyphosphate kinase C-terminal domain 1


Domain annotation for each model (and alignments):
>> PP_kinase_C_1  Polyphosphate kinase C-terminal domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   7.7e-07     0.014      91     144 ..      21      74 ..       3      87 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 7.7e-07
                    HT-EEEE--TT--B--EEEEEEE---S---EEEEEESS-SS---SS-EEEEEEE CS
  PP_kinase_C_1  91 agvkvvygvvglkvhaklllvvrreeeklrryvhlgtGnynektaklYtDlsll 144
                     g+++ + v++l++  k +++ + +++++++ + ++tGn  ++  +l tD+++ 
     KHJ33926.1  21 YGMNISFNVPNLQTEPKPTTLSNDNGSTVKNSISFSTGNSLDNQNELATDVKVS 74 
                    589***********************************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       325  (0.0181271); expected 358.6 (0.02)
Passed bias filter:                      222  (0.0123822); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.20s 00:00:00.53 Elapsed: 00:00:00.34
# Mc/sec: 785.00
//
Query:       KHJ33927.1  [L=228]
Description: putative imidazoleglycerol-phosphate dehydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.4e-60  201.3   0.9    1.1e-59  200.9   0.9    1.2  1  IGPD      Imidazoleglycerol-phosphate dehydratase


Domain annotation for each model (and alignments):
>> IGPD  Imidazoleglycerol-phosphate dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.9   0.9   6.2e-64   1.1e-59       2     144 .]      63     205 ..      62     205 .. 0.99

  Alignments for each domain:
  == domain 1  score: 200.9 bits;  conditional E-value: 6.2e-64
                 ...HHHHHHHHHHHHHT--EEEEEEESSH...HHHHHHHHHHHHHHHHHHS..-SSB--EEEEEEEETTEEEEEEEE--SS-EEE--..-SB--TT.-- CS
        IGPD   2 gigfldhmLdqlakhggfdlkvkvkgdlevddHhtvedvgialGqalkealgdkrgikRfgsallpmDealaevaldlsgrpylvleaelkrekigeld 100
                 gigfldhmL++lakh+g++l +k++gdl +ddHht edv ++lG+a++ alg+k+gi+Rfgsa++p+Deal+++++d+s+rp+ v++  lkrekig+l+
  KHJ33927.1  63 GIGFLDHMLHALAKHAGWSLVLKCEGDLYIDDHHTAEDVCLTLGEAFHVALGSKSGISRFGSAYAPLDEALSRAVVDISNRPFSVINLGLKREKIGDLS 161
                 9************************************************************************************************** PP

                 HHHHHHHHHHHHHHHT-EEEEEEEE--BHHHHHHHHHHHHHHHH CS
        IGPD 101 telveeffeslaeaagitlhvkvlrgenahhivealfKafaraL 144
                 +e++ + f+s+a++a+itlhv++l+g+n+hh +e++fKa a aL
  KHJ33927.1 162 CEMISHCFQSFAQTARITLHVHCLHGDNDHHRAESAFKACALAL 205
                 ******************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       365  (0.0203581); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1654.31
//
Query:       KHJ33928.1  [L=426]
Description: putative alpha beta fold family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.3e-14   52.0   0.0    6.8e-13   48.9   0.0    2.0  1  Abhydrolase_1  alpha/beta hydrolase fold
    0.00014   21.3   0.0    0.00039   19.8   0.0    1.8  1  Hydrolase_4    Serine aminopeptidase, S33


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.9   0.0   7.5e-17   6.8e-13       1     251 [.     124     367 ..     124     371 .. 0.84

  Alignments for each domain:
  == domain 1  score: 48.9 bits;  conditional E-value: 7.5e-17
                    SEEEEE-STTTCGGG.GTTGHHHHHHHHT...TSEEEEEEETTSTTSSSTTTGB.CHHSHHHHHHHHHHHHHHCTTSSEEEEEETHHHHHHHHHHH CS
  Abhydrolase_1   1 pvlvilhGlpgssdv.waerglapaLakd...gfdvillDlrGvgySspapacinddygtasvaddldrildalgddkltlvGhSmGGmialayaa 92 
                    p lv+lhGl+g+s+  + ++ l p  + +   ++d +++++rG+++ + +++   +   t++ +  + +++  ++ ++l  +G+S+G  i ++y a
     KHJ33928.1 124 PMLVVLHGLTGGSYEiYLKHVLEPLVNAErewKWDACVINSRGCARHKISSSILYNARATWDCRQTVLWLRKTFPKKQLFGIGFSLGANILTNYVA 219
                    679********77763555556666555599****************99999887888************************************** PP

                    HH..GGGEEEEEEESECSSCCHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHCHHHCCHHHHHHHCHHHHHHHH CS
  Abhydrolase_1  93 ey..perVkalvllgaidpaaslieaqrqqaksfpdffdgyaadcarnpagplladelaaleqrhrlvdalkfpdkskrfpssgsdnasslatgal 186
                    e     + ka+v ++       +  +    a +  +  + ++ +    ++ +ll+ ++  +  +++l +    ++  k  + +++d+ + + t++ 
     KHJ33928.1 220 EEgpTCKFKAVVVISN-----PWALEISSVALQKTWIGREVYSKTMGGNLKRLLELHYDQVSKNSKLDF----EKIRKAVYIHEFDRLVQGPTWG- 305
                    ***999**********.....*******************************************99876....6666666666677777777766. PP

                    HHHHHHHHCCHHHHHHHHHCTHHHHSEEEEEEETTCSSSCH.HHHHHHHHCHTSEEEEEEETCSSS CS
  Abhydrolase_1 187 ksieqwpttdsaklllrlrelknvlaptlvisgtsDplvpp.kaledlaqllpkkrlvvisdagHl 251
                     +  + +++  a++ ++   l +v++p + i +++Dp+v++    ++  +++p++ l++ s +gHl
     KHJ33928.1 306 -YPTEGAYYRDASSVDS---LFAVKIPFFAINAEDDPIVTNdAIPYEEIKQIPNAVLCTTSLGGHL 367
                    .4444444444444444...446889***************7777777777999999999999997 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   4.3e-08   0.00039      56     209 ..     180     344 ..     120     359 .. 0.62

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 4.3e-08
  Hydrolase_4  56 ddyvdDlaafvekvkeehpelplfllGhSmGGliallyllrypd..kva.glilsaPalkikaklk.appllkl..llkllgkllpklqv........ 139
                   + + D+++ v  ++++ p+++lf +G S+G+ i ++y++++ +  k++  +++s+P+    +++   + +      +k+         +        
   KHJ33928.1 180 ARATWDCRQTVLWLRKTFPKKQLFGIGFSLGANILTNYVAEEGPtcKFKaVVVISNPWALEISSVAlQKTWIGRevYSKT---------Mggnlkrll 268
                  5566799999999**************************66666578885566677764433333222222211222222.........222223334 PP

  Hydrolase_4 140 .........snnlkadslsrdpevvaayeadplvhgkitvrlllelldamkrleeraakitlPllllhGeaDkvvdpea 209
                           +++    +  + ++ v  +e d lv+g +      +++   ++ +++  ++++P++ + +e+D++v ++a
   KHJ33928.1 269 elhydqvskNSK---LDFEKIRKAVYIHEFDRLVQGPTWGYPTEGAYYRDASSVDSLFAVKIPFFAINAEDDPIVTNDA 344
                  456665422222...2334455667777788888777766667777777777888888899999999999999998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 3238.33
//
Query:       KHJ33929.1  [L=915]
Description: putative mrna degradation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.2e-114  381.5   1.3   2.2e-114  381.5   1.3    2.1  2  Pet127    Mitochondrial protein Pet127


Domain annotation for each model (and alignments):
>> Pet127  Mitochondrial protein Pet127
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.4     0.056     1e+03      15      51 ..     207     243 ..     199     255 .. 0.82
   2 !  381.5   1.3  1.2e-118  2.2e-114       1     274 []     304     578 ..     304     578 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.056
      Pet127  15 keekkkyvsStSsltsvLsqlylllsnfrklnlssls 51 
                 ++ k+ +++S+Ss t+  s++     +f+++++ +ls
  KHJ33929.1 207 NAMKSAFTTSSSSSTGKSSHMQWKSDEFETISTMNLS 243
                 5678899*********999999988888888887766 PP

  == domain 2  score: 381.5 bits;  conditional E-value: 1.2e-118
      Pet127   1 fvtsskdkeLlelakeekkkyvsStSsltsvLsqlylllsnfrklnlsslskafee..kskkftklarlpasvilrkkekvyaidsdksldkeiiLsal 97 
                 ++tss+d+ Ll+ a ee+kkyv+StSs++s+Ls++++llsn+r++++ +ls +++   k +++t ++r+p++++lr++++ yaid+dk++d ++iL++l
  KHJ33929.1 304 YITSSRDNLLLSKAVEENKKYVGSTSSMSSTLSHFHFLLSNWRPIEYGNLSGTIPCklKICNYTLFTRAPTAIFLRYRDGNYAIDADKEFDDSNILAML 402
                 99*************************************************9996544889************************************** PP

      Pet127  98 GkslEklLtleeeefekylkkeksekakeeekk..eaYnysklgkfllrsqLDcydprlpgtgvFdlKtRavvaiRydleeveketgyeikklkgefeS 194
                 Gks+EklLtl++e+feky+++++ +k +eee++  e+Y+y+++g+fllrsqLD++dprlpgtg+FdlKtR+v+++R+d++e+e++++yei+k++ge+eS
  KHJ33929.1 403 GKSMEKLLTLPTERFEKYRRNNS-DKLSEEERNerESYHYTTFGDFLLRSQLDAHDPRLPGTGMFDLKTRCVISVRMDVSEYESSSSYEIRKVRGEWES 500
                 *******************9995.55545444448**************************************************************** PP

      Pet127 195 ferEyydlirsalLKYslQariGqmdGifvaYHnikrifGfqYlpleeldkvlfgeeelaskladkeFklslelleklld 274
                 ferEyyd+irsa+LKYs+Q+r+G+mdGifva+Hn++rifGfqY++l+e+d++l+g+e+   +++d+eFklsl+ll+k++d
  KHJ33929.1 501 FEREYYDMIRSAFLKYSMQVRMGRMDGIFVAFHNTARIFGFQYISLAEMDYALHGTED--PTIGDEEFKLSLALLNKIFD 578
                 *******************************************************777..56***************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (915 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1046  (0.0583412); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 6181.85
//
Query:       KHJ33930.1  [L=694]
Description: putative cohesin loading factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.6e-111  373.7  11.0   2.1e-111  373.2  11.0    1.0  1  Cohesin_load  Cohesin loading factor
  ------ inclusion threshold ------
      0.011   16.0  12.7        2.5    8.5   1.0    4.7  5  TPR_12        Tetratricopeptide repeat
      0.014   16.0   0.1        3.9    8.3   0.0    3.4  2  TPR_6         Tetratricopeptide repeat
      0.027   13.9   1.9       0.85    8.9   0.1    3.1  3  TPR_MalT      MalT-like TPR region
       0.21   11.8   5.3         45    4.5   0.2    4.3  4  TPR_2         Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Cohesin_load  Cohesin loading factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  373.2  11.0  5.9e-115  2.1e-111       5     588 ..      61     679 ..      58     684 .. 0.95

  Alignments for each domain:
  == domain 1  score: 373.2 bits;  conditional E-value: 5.9e-115
  Cohesin_load   5 elLlslaeeyltaAhevvskv..kseeeleqYy.kLiatGikCLeavlk.dfklpprqearvtlrLariLleETenideAeeylskailiaeknrli 97 
                   +lL+s+aeey++aA+++++ +    + +l++ + kLiatG+ CLe+ lk  + l pr ea ++lr+a +L+eETen +eAe++lsk+i ++e+n+++
    KHJ33930.1  61 KLLISMAEEYFEAAYKLAACTtpTVTGNLDEKRlKLIATGLACLETTLKrVTGLDPRDEACIRLRYAGVLFEETENAMEAETALSKGIELCERNHYY 157
                   68***************99888866777766544***********99988999******************************************** PP

  Cohesin_load  98 dlkfvcqfLlarllektnpkaAlksldeliedaetyqhnewvylfrllriqlslqt..dkdnsaalenlqslaelanrkgdkklfvvlslleallhl 192
                   dlk+++ fLla+   k+n ka+ k ld  i+++et+   +wvy+fr+lr+++sl      dn+aa+ nl+s+ +la+++gd+ ++ v+sl+  ++ l
    KHJ33930.1 158 DLKYSMYFLLAQCVAKSNLKASIKALDAYISEVETFSNISWVYAFRFLRASYSLECgtYIDNNAAIRNLKSITSLAEQRGDRPIRFVASLMVVIAYL 254
                   *******************************************************9999************************************99 PP

  Cohesin_load 193 rrgspkdvlevlqeiiaaarslqldeeseqipqlkalllllellvslqkddvknvkekLkalqsfldelkdkkswsswsedgsiklkiters..... 284
                   r +   ++ ++l   +a++ s+q d +  qi +l +l ++l+l++s++++d++ + +kL+a  s +d + ++k+wss s+ + i++   ++      
    KHJ33930.1 255 RIS-GPEASQHLKSSMASVWSHQTDASC-QITPLIVLAHILDLACSIREGDPQIMMNKLQAARSAMDASIRNKDWSS-SDIILIPIPSSINVsrvls 348
                   999.666666666666889999555555.************************************************.899999999988889**** PP

  Cohesin_load 285 ............gl.klifswLpkkdllaLlYllsglvnlykkktd..ksekflqkalrqleklk..lksnnessnslstlsekikwlsvikcyvkf 364
                               g   li++ L++k ++ L  ll g+v+l  + ++   + k+l ++l++lek      s++ s+++ ++l ++  w + i+cy+++
    KHJ33930.1 349 pgtgmvlsigddGAdNLIMTLLDQKGAYCLSCLLYGVVLLNRSANEriPALKYLYQGLSILEKIDesNVSKSLSNRTSQNLMARFLWKEQILCYIRI 445
                   ************667****************************999999**************99775577788888899999999*********** PP

  Cohesin_load 365 yliliafvlknwkkankeleeletasnkleskllkelaplllyLeglyaqskgdlkaAlaqyk............etaarkskerelyilsllNlvi 449
                   y++++  +  +w + +  le+l+++ n+ e  + ++l++l+ yL+g+ +q++gdl++Al++++            ++ + ++ e +++il+ lN ++
    KHJ33930.1 446 YIAFCHSLSAEWIQLKTSLEKLQKTMNNIEIPIKNQLQSLIIYLSGVCYQGSGDLDTALEIFQdsrfklpvektsNISSIEQMELDIAILAGLNALL 542
                   ***********************************************************************998777777778899*********** PP

  Cohesin_load 450 Ilesevseddkelnkllsqleplcsnspnknislanalllattslfepisineekssllealkaakaikntqllsillnlisaklfegeleeqtkks 546
                   Il+ + + d    +++l+ lep+c  + n++i  a +l ++t+++++  +++e k++l++al++ak+++n+qllsi  +l+ +++f g ++ q++  
    KHJ33930.1 543 ILQHPKRFDPVRNKTMLNMLEPICLSHNNQDIVNAFNLTMVTVKTNSLKTFMEIKHHLSAALNGAKKTNNSQLLSITVTLMFSTFFVGRIGNQAENG 639
                   ************************************************************************************************9 PP

  Cohesin_load 547 er.alqlakksidysdglWvlvaetilaqlleqlgerakaeqt 588
                   ++ a ++a ks    + lW++va+ +laq  e  g+ ++a+++
    KHJ33930.1 640 AQaASRTAAKS---GNPLWMSVADNLLAQCNELHGKTEDAKAA 679
                   999********...************************99976 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.5      0.87   3.1e+03      22      33 ..      67      78 ..      65      79 .. 0.61
   2 ?    8.5   1.0   0.00069       2.5       2      63 ..     119     178 ..     118     187 .. 0.85
   3 ?   -3.3   0.0       3.1   1.1e+04      64      76 ..     398     410 ..     382     417 .. 0.65
   4 ?    8.1   0.0   0.00092       3.3       8      29 ..     489     510 ..     462     511 .. 0.71
   5 ?    4.3   0.2     0.014        50      49      76 ..     661     688 ..     633     690 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.87
      TPR_12 22 Alellekaleia 33
                A+e++e+a+ +a
  KHJ33930.1 67 AEEYFEAAYKLA 78
                666666666654 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00069
      TPR_12   2 vatalnnlaavlrr.lgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryee 63 
                  a++  ++a vl++  ++  eA++ l k +e+++r   ++++l  + ++ L+++  ++ ++++
  KHJ33930.1 119 EACIRLRYAGVLFEeTENAMEAETALSKGIELCERN--HYYDLKYSMYFLLAQCVAKS-NLKA 178
                 689999999999666******************999..9**************97655.5555 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 3.1
      TPR_12  64 Alelleealaiae 76 
                 Al++l + l i+e
  KHJ33930.1 398 ALKYLYQGLSILE 410
                 5666666665555 PP

  == domain 4  score: 8.1 bits;  conditional E-value: 0.00092
      TPR_12   8 nlaavlrrlgrydeAlelleka 29 
                   +++++  g++d Ale+++ +
  KHJ33930.1 489 LSGVCYQGSGDLDTALEIFQDS 510
                 5566666666666666666544 PP

  == domain 5  score: 4.3 bits;  conditional E-value: 0.014
      TPR_12  49 rnLgrlyralgryeeAlelleealaiae 76 
                 + L+++ ++ g++e+A ++ + al+ a+
  KHJ33930.1 661 NLLAQCNELHGKTEDAKAAMTLALESAR 688
                 7899999999999999999988888776 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0    0.0011       3.9       4      24 ..     488     508 ..     486     509 .. 0.90
   2 ?    3.6   0.1     0.035   1.3e+02       6      26 ..     663     683 ..     662     687 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0011
                 HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   4 yklalsyrklgdtdkAleale 24 
                 y+ + +y+  gd d+Ale+++
  KHJ33930.1 488 YLSGVCYQGSGDLDTALEIFQ 508
                 899*****977*********9 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.035
                 HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealerl 26 
                 la++ +  g+t++A++a+   
  KHJ33930.1 663 LAQCNELHGKTEDAKAAMTLA 683
                 89****988*******98755 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.1   0.00024      0.85     125     255 ..     124     258 ..     118     314 .. 0.70
   2 ?   -0.2   0.0      0.15   5.2e+02     249     309 ..     450     506 ..     428     515 .. 0.50
   3 ?    2.0   0.2      0.03   1.1e+02     142     230 ..     597     685 ..     593     692 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00024
    TPR_MalT 125 lvlladllyEwndLeeAeqhlqeGielleql.epeaaldayvllarialaqGdleeAetllekaeelaresnfhvdwlanaeevrvrlwlaqg...dla 219
                 l++ + l+ E  +  eAe++l +Giel+e+    +  + +y lla+ + a+ +l+++ ++l+     ++ ++  + w+ +++  r  + l +g   d+ 
  KHJ33930.1 124 LRYAGVLFEETENAMEAETALSKGIELCERNhYYDLKYSMYFLLAQ-CVAKSNLKASIKALDAYISEVE-TFSNISWVYAFRFLRASYSLECGtyiDNN 220
                 567788999999999**************97356999******999.7899999999999996655555.66668899999999999999999888888 PP

    TPR_MalT 220 aaerwleaa..elpsdddnhflelelrnlarvllalgr 255
                 aa r l+++    ++++d  ++ +    ++ ++l  + 
  KHJ33930.1 221 AAIRNLKSItsLAEQRGDRPIRFVASLMVVIAYLRISG 258
                 88888887733234455555544444444444444444 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.15
    TPR_MalT 249 vllalgrydeAlellerLlkaaeelgrv.rslieiliLqalalqaqgreeeAlaaLeqALeL 309
                 ++ + +++ + ++ le+L+k+  + ++  + +     Lq+l+ + +g   +   +L+ ALe+
  KHJ33930.1 450 CHSLSAEWIQLKTSLEKLQKTMNNIEIPiKNQ-----LQSLIIYLSGVCYQGSGDLDTALEI 506
                 44444555555555555555544443320222.....3333333333333333333333333 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.03
    TPR_MalT 142 eqhlqeGielleqlepeaaldayvllarialaqGdleeAetllekaeelaresnfhvdwlanaeevrvrlwlaqgdlaaaerwleaael 230
                 ++hl +++  +++ ++ + l ++v+l+  ++  G++ + ++  ++a   ++++     w + a+    +   ++g++++a+++++ a +
  KHJ33930.1 597 KHHLSAALNGAKKTNNSQLLSITVTLMFSTFFVGRIGNQAENGAQAASRTAAKSGNPLWMSVADNLLAQCNELHGKTEDAKAAMTLALE 685
                 57788888888888888888888888888888888876555555555555555555678888888888888888888888877765544 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.4      0.14   4.9e+02      20      30 ..      67      77 ..      64      78 .. 0.88
   2 ?   -1.0   0.0      0.71   2.5e+03      19      34 .]     139     154 ..     124     154 .. 0.74
   3 ?    4.3   0.0     0.015        54       5      25 ..     488     508 ..     485     510 .. 0.88
   4 ?    4.5   0.2     0.013        45       6      29 ..     662     685 ..     661     689 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.14
       TPR_2 20 AleafekAlel 30
                A+e+fe+A +l
  KHJ33930.1 67 AEEYFEAAYKL 77
                99******998 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.71
       TPR_2  19 eAleafekAleldPnn 34 
                 eA+ a+ k +el+++n
  KHJ33930.1 139 EAETALSKGIELCERN 154
                 999********99875 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.015
       TPR_2   5 ynlGlayyklgdyeeAleafe 25 
                 y  G +y  +gd++ Ale f+
  KHJ33930.1 488 YLSGVCYQGSGDLDTALEIFQ 508
                 6679**************997 PP

  == domain 4  score: 4.5 bits;  conditional E-value: 0.013
       TPR_2   6 nlGlayyklgdyeeAleafekAle 29 
                  l+++ +  g+ e+A++a+  Ale
  KHJ33930.1 662 LLAQCNELHGKTEDAKAAMTLALE 685
                 699*******************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (694 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       650  (0.0362541); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 4819.81
//
Query:       KHJ33931.1  [L=478]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.081   13.5   1.6         24    5.5   0.0    3.7  4  DUF4706   Domain of unknown function (DUF4706)


Domain annotation for each model (and alignments):
>> DUF4706  Domain of unknown function (DUF4706)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.13   2.3e+03      15      31 ..      91     107 ..      86     110 .. 0.88
   2 ?    3.7   0.1    0.0049        87       8      40 ..     179     211 ..     176     214 .. 0.91
   3 ?    5.5   0.0    0.0013        24      12      47 ..     257     293 ..     252     315 .. 0.80
   4 ?   -1.8   0.0      0.25   4.5e+03      43      73 ..     374     404 ..     351     423 .. 0.60

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.13
     DUF4706  15 edkeeikekyepewerl 31 
                 +d+ +i++++e +w+ l
  KHJ33931.1  91 ADIIAIRQRRERTWQAL 107
                 78999*********987 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0049
     DUF4706   8 smarkImedkeeikekyepewerlspkeqdeli 40 
                 +m++k++  +++i  +++++++++++ e+ + i
  KHJ33931.1 179 NMSKKVVVATQKIILSQGSNRASMKEVEKTRTI 211
                 59***********************99998766 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.0013
     DUF4706  12 kImedkee.ikekyepewerlspkeqdelideslvkp 47 
                  I+ dk+  ++   e+ew +lsp+  +e+i ++l+k 
  KHJ33931.1 257 TIVSDKRLfVRLPLEHEWRNLSPAGIREVIVKKLMKS 293
                 5777776438999********9999999888888873 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 0.25
     DUF4706  43 slvkpevrakykeesserekeelfpklklkt 73 
                 + v+p   + y+++++e+ + +++ ++ ++ 
  KHJ33931.1 374 YSVRPAHVKLYGRNNPEAPHRTWMAFFVKAP 404
                 3344555555577777777777776665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (478 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3626.28
//
Query:       KHJ33932.1  [L=444]
Description: hypothetical protein EV44_g3620 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        8.1    6.1   8.4        7.4    6.2   5.5    2.0  2  DUF745    Protein of unknown function (DUF745)


Domain annotation for each model (and alignments):
>> DUF745  Protein of unknown function (DUF745)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   5.5   0.00042       7.4      69     138 ..      20      90 ..      16     113 .. 0.70
   2 ?   -0.1   0.2     0.036   6.5e+02      69     104 ..     106     142 ..      95     149 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.00042
      DUF745  69 qelreaeavvqeekkslqsseanakaaakaakqaqqqleal.kallkaakenlenaeqvaagaqqelaekt 138
                 +e++e ++v+++++ +++++e++++  a+ +++ ++q +al  a+l   k n + ++++++  +q+   k 
  KHJ33932.1  20 EEINEVNEVLNNISFQMHKTENAITRLADQHEESTKQSKALlDAILSLKKGNEAVLNAIQNLGNQKSIVKD 90 
                 699*******************9988777777777666665055555555565555555555555555555 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.036
      DUF745  69 qelre.aeavvqeekkslqsseanakaaakaakqaqq 104
                 +++++  ++ vq+ek  + +s+ n+++a++ ++q   
  KHJ33932.1 106 ENQEDlYNQDVQQEKPLYYQSSGNVASAKTLNDQSIY 142
                 4444423677999999************999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1135  (0.0633053); expected 358.6 (0.02)
Passed bias filter:                      541  (0.0301746); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.38
# Mc/sec: 3548.35
//
Query:       KHJ33933.1  [L=568]
Description: putative auxin efflux carrier superfamily [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-48  164.1   4.7    5.9e-48  163.2   4.7    1.4  1  Mem_trans  Membrane transport protein


Domain annotation for each model (and alignments):
>> Mem_trans  Membrane transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.2   4.7   3.3e-52   5.9e-48       2     386 ..      50     554 ..      49     555 .. 0.83

  Alignments for each domain:
  == domain 1  score: 163.2 bits;  conditional E-value: 3.3e-52
   Mem_trans   2 vleavvplyvimllgYgsvkwvkiftpdqcsginrfVvlfavPllifhfisqnnpyemllrfiladvlvklivlillllgallskifkgslewtitlfs 100
                 ++ea ++++++ l gY+ ++  ++f+ ++++ + +++v +++P+lif++++++ + e+ll++ +++v++++ ++++ l+   ++k f + ++ t+++++
  KHJ33933.1  50 IFEASMEVVCVSLPGYILARL-GLFNAEHQKFVANLNVMIFTPCLIFTKLASKLTAEKLLDLSIIPVVFLVQTAVSYLVSITVAKCFGFGKKPTNFVTA 147
                 789999***************.***************************************************************************** PP

   Mem_trans 101 lstlpNtlvlgipllkalyge...................ygvslmvqvvvlqciiiytlllflfeyrgaklliseefpdtaasivsikvdsdvvsldg 180
                 +  ++N+++l+i+l+ +l ++                   +g+++++++++l++ ++++++++++  ++ ++++     + +++i++  +  ++ s   
  KHJ33933.1 148 MGIFGNSNSLPISLVISLSKTlnglhwskipndndeevaaRGILYLLIFQQLGQLVRWSWGYHVLLAPE-RINVV----ERGNNIEEYSEPPQLYSRLD 241
                 **************************************************************8877443.33333....33334555555555554333 PP

   Mem_trans 181 rk..pleteaeikedgklhvtvrksnasrsdivs.....sstprpsnltnaeiyslq.......................................... 230
                 ++   l+ ++  +  ++  +++ +     +   s     s  +++   t  e y                                             
  KHJ33933.1 242 SRpaHLQINEGCEASETASLRSDNKIVTTK---SictglS-DSEDDSHTMTETYPCFlrrdtptyneisslitsfpriqttptsenqnipsglkgvvpl 336
                 331333333333333333332222222222...1233532.333333344444433345677777777777799999********************** PP

   Mem_trans 231 ........................................mtrlilimvlrklirnPntyssllglilslvsfkwnvimp......kiiqksisilgda 283
                                                          t + l      +++nP+++++l ++i++ ++ ++++i+       + +++++s+ g +
  KHJ33933.1 337 vrihiyrfihfikqkiisgfcfiftslpgslqiflwktysYTKRFLA--GAWEFMNPPLWAMLSAIIVASIPTLQHLIFSqgtfisNSFTRAVSQSGGV 433
                 *********************************99977654444433..44589********************************************* PP

   Mem_trans 284 glpmalfslGlfLalqpkkiacgnsvatfa..........lavRlilgPlvmlvavlavgLrgslllvaivq............aAlPqgivlfviAke 360
                 ++p++l++lG++La++    + + ++++ +          l+ R++   l+m ++++++     ++  ++++            +  P++i+l +i++ 
  KHJ33933.1 434 AVPLILVVLGANLARNTLPHESRDKYSEENqigkklliasLLSRMLFPALIMSPLLALIA----KFIPISIVddpifvivcfllTGAPSAIQLAQICQI 528
                 **************9987777777777666889******9999***99999999999999....66666666799999999****************** PP

   Mem_trans 361 ynvherelstllifgmlialpitlvy 386
                 ++v e+ +s+ll+ +++i +++ +++
  KHJ33933.1 529 NGVYENVMSNLLFHSYVIWIFPSTLI 554
                 ******************99988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (568 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       432  (0.024095); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3874.73
//
Query:       KHJ33934.1  [L=637]
Description: putative map kinase kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.1e-54  184.6   0.0    2.3e-51  174.7   0.0    2.1  2  Pkinase         Protein kinase domain
    7.6e-33  113.9   0.0    1.8e-31  109.4   0.0    2.1  2  Pkinase_Tyr     Protein tyrosine kinase
    0.00063   19.1   0.0     0.0011   18.3   0.0    1.3  1  Kinase-like     Kinase-like
     0.0012   17.9   0.0     0.0018   17.3   0.0    1.2  1  Haspin_kinase   Haspin like kinase domain
     0.0077   15.1   0.0      0.012   14.4   0.0    1.2  1  Pkinase_fungal  Fungal protein kinase
  ------ inclusion threshold ------
      0.017   14.2   0.1      0.032   13.3   0.1    1.3  1  Seadorna_VP7    Seadornavirus VP7


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0   0.00059       1.8       3      21 ..     259     277 ..     257     281 .. 0.87
   2 !  174.7   0.0   7.6e-55   2.3e-51      20     264 .]     318     561 ..     313     561 .. 0.92

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00059
                 EEEEEEEESSEEEEEEEET CS
     Pkinase   3 kleklGeGsfGkVykavek 21 
                 +le+lG+G++G+Vyk++++
  KHJ33934.1 259 TLEELGKGNYGTVYKVRHA 277
                 6799************986 PP

  == domain 2  score: 174.7 bits;  conditional E-value: 7.6e-55
                 ETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHH.HT CS
     Pkinase  20 eketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeakkiakqilegleylH.sk 117
                 ++++g  +A+K+i+ e ++ k   ++++E+ il+++++p+i+ +y++f ++  +y++ ey++gg++++++     ++e+ ++ki++ +++gl+ l  ++
  KHJ33934.1 318 NTTSGVVMAMKEIRLELDEAKF-AAIIMELDILHRCNSPFIIDFYGAFFQEGAVYICIEYMDGGSIDKIYG--NGIPENILRKITYATVKGLQTLKdDH 413
                 6678889*********999988.59*********************************************6..58********************9889 PP

                 TEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHH..........TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHH CS
     Pkinase 118 giiHrDlKpeNiLidekgelKitDFGlakelessskltsfvgtseYlAPEvl..........keneyskkvDvWslGvilyelltgkppfsgekgkekv 206
                 +iiHrD+Kp NiLi+++g++Ki+DFG++ +l  s  +++ +g + Y+APE +          ++  ys ++D+WslG++++e   g+ p++     e++
  KHJ33934.1 414 NIIHRDVKPTNILINTRGQIKICDFGVSGNLVASI-AKTNIGCQSYMAPERIaggglaqtgsGDGTYSVQSDIWSLGLTIIECALGRYPYP----PETY 507
                 9********************************99.*****************99999887666899************************....5667 PP

                 HHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 207 ekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 ++++ ql +i++     +     ++++s+++ d+++++l+k+p+ R+  ++llqh +l
  KHJ33934.1 508 NNIFSQLSAIVD----GEPPALPKDSFSPQICDFVRSCLNKKPMLRPKYSMLLQHIWL 561
                 778888544433....35666778899*****************************97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0      0.03        89       3      19 ..     259     275 ..     257     283 .. 0.83
   2 !  109.4   0.0   6.1e-35   1.8e-31      24     258 ..     318     558 ..     303     559 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.03
                  EEEEEEEESSEEEEEEE CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegt 19 
                  + ++lG+G++G+V++ +
   KHJ33934.1 259 TLEELGKGNYGTVYKVR 275
                  5789**********976 PP

  == domain 2  score: 109.4 bits;  conditional E-value: 6.1e-35
                  TTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHH CS
  Pkinase_Tyr  24 kekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLes 121
                  ++++ v  a+K ++ e +e + ++++ e++i+++++ p i+ ++g+  +e+ ++i +ey++gG+++k   +     +  + l ++++   kG++ L++
   KHJ33934.1 318 NTTSGVVMAMKEIRLELDEAKFAAIIMELDILHRCNSPFIIDFYGAFFQEGAVYICIEYMDGGSIDKIYGNG----IPENILRKITYATVKGLQTLKD 411
                  566677889********************************************************9987665....9999999*************96 PP

                  .TTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE..........EEHHHHHHHHHHHHHHHHTTSSGTTTT CS
  Pkinase_Tyr 122 .kklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk..........ftsksDvWsfGvllwEiftlgespypg 208
                   ++++Hrd+   N+L++++ ++ki+DfG++ ++      + ++++  +  +mapE +  +           ++++sD+Ws G +++E +  g+ pyp 
   KHJ33934.1 412 dHNIIHRDVKPTNILINTRGQIKICDFGVSGNL----VASIAKTNIGCQSYMAPERIAGGGlaqtgsgdgtYSVQSDIWSLGLTIIECAL-GRYPYPP 504
                  267*****************************9....556667778899********99888889999999****************765.*****99 PP

                  SHHHHHHHHH...HTTEES-BBT.TSBHHHHHHHHHHT-SSGGGS--HHHHHHH CS
  Pkinase_Tyr 209 lkneevlekl...kegkrlekpe.kcpeelyelmkkcweedpeeRptfselvek 258
                   + ++++++l    +g+  + p+ + ++++ +++++c++++p  Rp++s l+++
   KHJ33934.1 505 ETYNNIFSQLsaiVDGEPPALPKdSFSPQICDFVRSCLNKKPMLRPKYSMLLQH 558
                  9888877766322567777766515799********************999876 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0   3.7e-07    0.0011     156     243 ..     405     495 ..     393     508 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 3.7e-07
  Kinase-like 156 laanLq.akglvhgkftvdnllldekgglmlggftaLvragtkvvl.sevekgfaPpEllgsrgg.ytrknktkmthkldaWqlGlviyri 243
                    + L+ ++ ++h +++++n+l + +g++++ +f+      ++    +  ++++  pE ++  g   t     +++ + d W lGl+i   
   KHJ33934.1 405 GLQTLKdDHNIIHRDVKPTNILINTRGQIKICDFGVSGNLVASIAKtNIGCQSYMAPERIAGGGLaQTGSGDGTYSVQSDIWSLGLTIIEC 495
                  5556652468************************85444444433324678*******9999777777788999*************9765 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   5.9e-07    0.0018     176     254 ..     362     441 ..     302     452 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 5.9e-07
  Haspin_kinase 176 pdfyseqqlflvlllkdkGtdLeev..klkswkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlkls 254
                      f++e+ +++ ++  d+G +++++  +    +   +i + +vk L+      +  HRd +  niL++  +++ ++d+ +s
     KHJ33934.1 362 GAFFQEGAVYICIEYMDGG-SIDKIygNGIPENILRKITYATVKGLQTLKDDHNIIHRDVKPTNILINTRGQIKICDFGVS 441
                    5566666666666655544.68888344444455789****************************************9876 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0     4e-06     0.012     315     343 ..     402     430 ..     383     468 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 4e-06
  Pkinase_fungal 315 aIkghrsLflkagiLHrDiSenNilitds 343
                      +kg++ L  + +i+HrD+   Nili+  
      KHJ33934.1 402 TVKGLQTLKDDHNIIHRDVKPTNILINTR 430
                     699***********************933 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   1.1e-05     0.032     149     187 ..     401     438 ..     385     456 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.1e-05
  Seadorna_VP7 149 aglkdLmdfhsestnllhGDcnpenlmcDknGylklvDP 187
                   a +k L+++  +++n++h D++p n++ +  G++k+ D 
    KHJ33934.1 401 ATVKGLQTLK-DDHNIIHRDVKPTNILINTRGQIKICDF 438
                   4455666655.5669*********************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (637 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4640.45
//
Query:       KHJ33935.1  [L=505]
Description: putative autophagy protein apg6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.8e-72  242.0   0.0    7.7e-72  241.0   0.0    1.5  1  APG6           Apg6 BARA domain
    1.8e-37  128.9  11.7    1.8e-37  128.9  11.7    1.9  2  APG6_N         Apg6 coiled-coil region
  ------ inclusion threshold ------
        0.4   11.1   5.3        1.4    9.4   5.3    2.0  1  GPS2_interact  G-protein pathway suppressor 2-interacting dom
       0.82    8.5  13.1       0.11   11.4   8.9    1.6  2  Spc7           Spc7 kinetochore protein


Domain annotation for each model (and alignments):
>> APG6  Apg6 BARA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.0   0.0   1.7e-75   7.7e-72       1     179 []     293     494 ..     293     494 .. 0.92

  Alignments for each domain:
  == domain 1  score: 241.0 bits;  conditional E-value: 1.7e-75
        APG6   1 LrktnvyndaFkIshdgkfgtInglrLGrlpsekvewsEinAAlGqtvlLLatiaeklnlkfqeyklvplGstSkiekleeksee.............. 85 
                 L++tn ynd+F+Ishdg+fgtInglrLGrl+s +v+w EinAA+G++vlLL+t+a++l++kf++y+l+p+GstS+i +le++                 
  KHJ33935.1 293 LQRTNLYNDVFCISHDGNFGTINGLRLGRLSSIPVDWPEINAAWGHAVLLLQTVADRLGFKFKGYQLKPMGSTSRIVSLESTLPLnsrgsvqrkistrq 391
                 89**************************************************************************99555444355566677777777 PP

        APG6  86 ....vlelyssgelklgllfserkfDkamvafleclkqlaekvekedk.......elelPYkikkdkdkigdlsiklqfneeeeWtkAlkllLtnlkwl 173
                     v+el+ssg+++lgl+f++r+fD+amvafl+cl+ql+++ve+e++       +l lPYki+ d  kigd+sikl +++++ W++A+k++Lt++k+l
  KHJ33935.1 392 qqktVHELFSSGDMPLGLTFMHRHFDNAMVAFLDCLRQLGAHVEEETAkdpntrtPLALPYKIEGD--KIGDVSIKLGIAQDDAWSRACKFTLTCCKFL 488
                 7788***************************************88665677888899******777..******************************* PP

        APG6 174 lawvss 179
                 la+vs+
  KHJ33935.1 489 LAHVSN 494
                 ***996 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       1.1   4.7e+03      92      92 ..     111     111 ..      55     145 .. 0.59
   2 !  128.9  11.7   3.9e-41   1.8e-37       1     132 [.     162     289 ..     162     290 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.1
      APG6_N  92 e 92 
                 +
  KHJ33935.1 111 K 111
                 1 PP

  == domain 2  score: 128.9 bits;  conditional E-value: 3.9e-41
      APG6_N   1 PlCeeCtdlLleeldkqleqaekerdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeee 99 
                 P+C+eCtd L++el+k+ e+a+kerdaY  flk+lk++ ++++    e++e++e l+k +k+ee++++eLkele+e+ e+e+++ +le +++al+ eee
  KHJ33935.1 162 PVCVECTDFLVKELQKRHEAATKERDAYIGFLKQLKADIPTND----EIRESREALSKAQKDEERAIAELKELEREKTEVEEDILKLEIKARALDIEEE 256
                 9*************************************99976....**************************************************** PP

      APG6_N 100 rfwreynelqlelleleeeldsleaqyehaqnq 132
                 +fwre+n+++++l+e+++ +ds++ qy+h+++ 
  KHJ33935.1 257 KFWRERNDFSMKLTEFQNIRDSINLQYDHDSQV 289
                 ******************************985 PP

>> GPS2_interact  G-protein pathway suppressor 2-interacting domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   5.3   0.00032       1.4      11      76 ..     202     267 ..     192     279 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00032
  GPS2_interact  11 tlpseaeqeqelvpsrlsKdeLlqnidkvDREiakveqqiskLkkkqkeleeeaakpkeeekpvep 76 
                    t  +  e+ ++l+  +   +  + ++    RE + ve++i kL  k + l+ e  k ++e++  + 
     KHJ33935.1 202 TNDEIRESREALSKAQKDEERAIAELKELEREKTEVEEDILKLEIKARALDIEEEKFWRERNDFSM 267
                    4444334444554444444568************************99999999888877776655 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1      0.65   2.9e+03     144     170 ..     125     151 ..     100     161 .. 0.52
   2 ?   11.4   8.9   2.4e-05      0.11     168     254 ..     171     257 ..     165     286 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.65
        Spc7 144 leenlegleedkelLekqeeeldellp 170
                   ++ e+l+ d ++++++ + +++l +
  KHJ33935.1 125 NADKNEALNGDGKTISQEVDRISRLFE 151
                 333444444444444444444444444 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 2.4e-05
        Spc7 168 llpeleeekaeleeeleklqeaaeeles.id.keeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeae 254
                 l++el++++++ ++e +    + ++l++ i  ++e++e re+l++++++ e+  +el+el+++++e+ee+i +l  +++    +i+e++
  KHJ33935.1 171 LVKELQKRHEAATKERDAYIGFLKQLKAdIPtNDEIRESREALSKAQKDEERAIAELKELEREKTEVEEDILKL--EIKARALDIEEEK 257
                 78999**********999999999998864459**************************************666..5555555666444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1476  (0.0823247); expected 358.6 (0.02)
Passed bias filter:                      603  (0.0336327); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 3299.10
//
Query:       KHJ33936.1  [L=708]
Description: putative myb-like dna-binding domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-20   70.9   0.6    1.3e-19   69.7   0.1    2.0  2  Scm3      Centromere protein Scm3


Domain annotation for each model (and alignments):
>> Scm3  Centromere protein Scm3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.7   0.1   7.2e-24   1.3e-19       3      53 ..      48      97 ..      46      97 .. 0.94
   2 ?   -3.6   0.0      0.55   9.9e+03      13      33 ..     687     703 ..     677     705 .. 0.68

  Alignments for each domain:
  == domain 1  score: 69.7 bits;  conditional E-value: 7.2e-24
                HHHHHHHHHHHHHHHHHHHHHHSG..GGSS--B-TTT-SB-XXXXXXXXXX CS
        Scm3  3 llreesderlkkrwesifeKYeridfedqgDEIDlatgeivvDnGhlrelr 53
                ++r+  d++lk ++esif+KY++ dfe++gDEID+atgeivv+nGhl +++
  KHJ33936.1 48 EKRAVLDKKLKATFESIFKKYSK-DFEGIGDEIDIATGEIVVNNGHLLRMQ 97
                5788889****************.***********************9986 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.55
                 HHHHHHHHHHHHSG..GGSS- CS
        Scm3  13 kkrwesifeKYeridfedqgD 33 
                 k++  + f+++e+ d     D
  KHJ33936.1 687 KNKNKRSFARFEE-DE---RD 703
                 5555666788888.66...33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (708 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       681  (0.0379832); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 4851.22
//
Query:       KHJ33937.1  [L=418]
Description: putative peroxisomal membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.3e-51  172.5   0.1    1.1e-50  171.6   0.1    1.4  1  Peroxin-13_N  Peroxin 13, N-terminal region
    3.5e-08   33.0   0.0    7.1e-08   32.0   0.0    1.5  1  SH3_2         Variant SH3 domain
    4.9e-06   26.0   0.0      1e-05   25.0   0.0    1.6  1  SH3_1         SH3 domain
    5.9e-06   26.1   0.1    1.3e-05   25.0   0.1    1.6  1  SH3_9         Variant SH3 domain


Domain annotation for each model (and alignments):
>> Peroxin-13_N  Peroxin 13, N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.6   0.1   2.6e-54   1.1e-50       2     145 .]     129     266 ..     128     266 .. 0.90

  Alignments for each domain:
  == domain 1  score: 171.6 bits;  conditional E-value: 2.6e-54
  Peroxin-13_N   2 ltqsaeestratfqliesivgafgsfaqmLestymAthsSFfavvsvaeqfgrLketlgsvlsifalirllkkilskllglllekkkkekskaeefw 98 
                   lt+ ++ +t+atfq+ie+ivgafg++aqmLestymAthsSFfa+vsvaeqfg+L++tlgs+l+if+++r+l+++++kl+g+    +++++ ++++f 
    KHJ33937.1 129 LTNGFTRNTEATFQMIENIVGAFGGLAQMLESTYMATHSSFFAMVSVAEQFGNLRNTLGSILGIFTILRWLRTLFAKLTGRP-PPADATSLTSKAF- 223
                   78999****************************************************************************5.7888888898888. PP

  Peroxin-13_N  99 kkfessskkkeekeskeekkkkkisskplllflaaviglPyllkkli 145
                   +kfe +++  +     +  + +++s+kp+++f+aa++glPyl+ kli
    KHJ33937.1 224 AKFEGRKTLPD----GTLVDLARPSKKPFFFFIAAAFGLPYLMGKLI 266
                   99*99983222....22223346**********************98 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0   1.6e-11   7.1e-08       2      56 ..     307     369 ..     306     370 .. 0.80

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 1.6e-11
                 EEESS-B-SCGCCB.....--B-TTEEEEEE......EEEECTTEEEEEE.CCCEEEEEGCGEEE CS
       SH3_2   2 vraiedyvgedkse.....LsfkkGdvikvls....lgskdsdgwwegev.gGrvGlfPsslvee 56 
                 +r++ d+++e         L++kkGd+++vls    lg  ++ +ww+++  +Gr G+ P+ ++e+
  KHJ33937.1 307 CRVLYDFTPETGANvegvdLQLKKGDLVAVLSqcdpLG--NPSEWWRCRArDGRIGYLPRIYLEV 369
                 7888888884444478899************7665444..666*****887*********99886 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   2.3e-09     1e-05       1      47 [.     308     363 ..     308     364 .. 0.87

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 2.3e-09
                 EESSSBEXSS.....TTBXEBSTTEEEEEEEECSS.....SEEEEEETTSTEEEEEE CS
       SH3_1   1 iAlYDYeaee.....sdELsfkkGDviivleksed.....gWwkgrlkgtgkeGliP 47 
                 ++lYD+++e+       +L++kkGD + vl++ +      +Ww++r ++ g+ G+ P
  KHJ33937.1 308 RVLYDFTPETganveGVDLQLKKGDLVAVLSQCDPlgnpsEWWRCRARD-GRIGYLP 363
                 689***99987555577**************988788888********9.69***99 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.1   2.9e-09   1.3e-05       1      49 []     309     368 ..     309     368 .. 0.86

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 2.9e-09
       SH3_9   1 Alypyepredd.....eLsLqrGDvitvieese.....dgWlegs.ltGrtGlvPanyve 49 
                 +ly+++p   +      L+L +GD + v+++++     + W++++ ++Gr G++P+ y+e
  KHJ33937.1 309 VLYDFTPETGAnvegvDLQLKKGDLVAVLSQCDplgnpSEWWRCRaRDGRIGYLPRIYLE 368
                 78999998888887777************885545556*******67***********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (418 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       617  (0.0344135); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3094.10
//
Query:       KHJ33938.1  [L=232]
Description: putative pyrazinamidase nicotinamidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.4e-28   98.6   0.0    8.4e-28   97.7   0.0    1.4  1  Isochorismatase  Isochorismatase family
  ------ inclusion threshold ------
       0.11   12.1   0.1       0.19   11.3   0.1    1.5  1  Herpes_UL4       Herpesvirus UL4 family


Domain annotation for each model (and alignments):
>> Isochorismatase  Isochorismatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.7   0.0   9.4e-32   8.4e-28       1     174 [.      12     217 ..      12     218 .. 0.86

  Alignments for each domain:
  == domain 1  score: 97.7 bits;  conditional E-value: 9.4e-32
  Isochorismatase   1 talvviDmqndfv.eegvkeseeisavveninkllk......aarkagip.....viftrdvhe..........leevkgdlderkaaphfkpg 72 
                      tal+++Dmq+df+  +g  +++++s++++ ink l+       a k + +      +++++v +            +   + + r +++h++ g
       KHJ33938.1  12 TALIIVDMQEDFCsYNGSLAIPNASEIIRIINKILDlpfaikVASKDW-HptshiSFACNHVGKvpytdtvntkNIPKAEEKKIRLWPKHCVAG 104
                      8************98888888888888888888776332110333333.3455555666666669999998876666777788899******** PP

  Isochorismatase  73 ttgaelvpelaplegdvvvdKt......rfsaf.....agtdldeiLkelgiktivlaGiatdvCVeatardaldlGyevvvvsDAvaalspel 155
                      t gae++ el+  + d v++K        +s f     ++++l  iL+el+++++ ++G+a d+CV+ ta++ +++G+++vv+++A+ a spe+
       KHJ33938.1 105 TLGAEFISELQASKIDMVIEKGteenveMYSVFydvwgKDSGLSMILRELKVTDVWIVGVAFDYCVKETAIHSIQEGFNTVVLREATMATSPEN 198
                      *********************9999999888889999*9******************************************************* PP

  Isochorismatase 156 hdaalkrlkqafatvitte 174
                      +  a ++lk+++++v++ +
       KHJ33938.1 199 WSLAEEELKNSGVKVLSID 217
                      ***************9876 PP

>> Herpes_UL4  Herpesvirus UL4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   2.1e-05      0.19      59      75 ..      11      27 ..       2      85 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.1e-05
  Herpes_UL4 59 vgtlivvDcetefcaYl 75
                +  li+vD +++fc+Y 
  KHJ33938.1 11 ITALIIVDMQEDFCSYN 27
                789*************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       387  (0.0215851); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1737.90
//
Query:       KHJ33939.1  [L=1090]
Description: putative transcription initiation factor subunit taf1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   8.6e-178  591.5   0.4   1.2e-177  591.1   0.4    1.2  1  DUF3591    Protein of unknown function (DUF3591)
     0.0099   15.9   0.9       0.02   14.9   0.9    1.5  1  zf-CCHC    Zinc knuckle
  ------ inclusion threshold ------
      0.014   15.2   1.7      0.029   14.2   1.7    1.5  1  zf-CCHC_6  Zinc knuckle


Domain annotation for each model (and alignments):
>> DUF3591  Protein of unknown function (DUF3591)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  591.1   0.4    2e-181  1.2e-177       1     441 []     417     879 ..     417     879 .. 0.95

  Alignments for each domain:
  == domain 1  score: 591.1 bits;  conditional E-value: 2e-181
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................xxxxxxxxxxxxxxxxxxx RF
     DUF3591   1 fnlsnDkaYealkenkqskvrstlgnlkveHSlpAlkLqlpfyktklskkelrsfHrprlkvk.................kkakgkeekellkktkDLs 82 
                 fn+snD+aY+alken+qskvr+tlg+l+veHS+pAlkLq+p+y++kl  +++rsfHrp+lk+k                 k+ kg +++e++k+tkDLs
  KHJ33939.1 417 FNFSNDEAYDALKENHQSKVRATLGHLTVEHSMPALKLQWPYYQVKLYVDQARSFHRPSLKFKrflgqviyfskpgmrkkKAIKGMQTHEIFKETKDLS 515
                 9*****************************************************************************966999*************** PP

                 xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     DUF3591  83 lkdt.skvvllEYseeyPpllsnvGMgsklinYYrkkkekDtsrpkle..lGetvvlepedksPFlnlGevepgetvqtlennliraPifkhkvkstDF 178
                 l+d+ s+++l+EYsee+P++ls +GMg+++inYYr+k+++D +rp+ e  +G+t+vl ped+sPF+n+G v+pg+tv+tl+n ++raPifkh++kstDF
  KHJ33939.1 516 LADHySTATLFEYSEEHPTVLSGFGMGNRIINYYRRKNADDAERPQPEdkIGDTTVLLPEDRSPFSNFGMVDPGQTVRTLHNSMFRAPIFKHEPKSTDF 614
                 ***98999************************************965556************************************************* PP

                 xxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     DUF3591 179 Llirstt.kekkkyylreidnlfvvGqtlPlveVpgphsrkvtnfsknrLkviiyrllrkskekrikvedikkafpdqselqiRkrLkefaeyqrkged 276
                 ++irs+t  e++k++lr+idn+fvvGq+lP++e+pgphsrkvtn++knr+k+i+yr +r+s ++++k++d+++++ d++++q+R++Lkef+ y++    
  KHJ33939.1 615 ICIRSSTgVEGTKWHLRNIDNIFVVGQQLPSMEIPGPHSRKVTNAAKNRMKMIAYRKIRHSAQRNVKIADVTAHITDSTDMQNRQKLKEFMVYDK---V 710
                 *******9***************************************************************************************...6 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     DUF3591 277 sgvWklkeeerlpseeeirklvtPEdvcllesmqvgeqrlkdagyakeeeeeeedek..keeskleleeqlapWnttknFlaAtqgkamlqlhGegDPt 373
                 ++vWk+ +++ + +e++ir++++PEdvc+l++mqvg + l+dagy+++++++ +d +  + +++++le++lapW++tk+Fl+A++ kaml+l+G gDP+
  KHJ33939.1 711 EKVWKMPPGDAVRDEAQIRSMIKPEDVCVLDAMQVGSRYLEDAGYEAKDDKDGKDMDilDGDTEESLEQSLAPWSITKSFLDASADKAMLALKGPGDPS 809
                 79*******************************************887777766554226677799********************************* PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
     DUF3591 374 GrgegfsfvrtsmKegfkkageskeeklkaeaekk..gtdadlrklnvaeqqkvyeeeikkiwraqrisl 441
                 G+g++ sf++tsmK+gf ++  + + +l+++a++    ++++++++nv+ qq++y+++i++iw+aq++sl
  KHJ33939.1 810 GCGLALSFLKTSMKGGFLQNLGKDKGDLNHKAKEAldPSKNGGHTYNVKLQQNIYNNTIREIWDAQMASL 879
                 *****************7776666666665554336799***************************9987 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.9   3.4e-06      0.02       1      14 [.    1036    1049 ..    1036    1050 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 3.4e-06
                  SCTSSSSSSSSTTT CS
     zf-CCHC    1 rkCynCGepGHiar 14  
                  rkC nCG+ GHi+ 
  KHJ33939.1 1036 RKCANCGQAGHIKT 1049
                  69*********985 PP

>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   1.7   4.9e-06     0.029       2      21 ..    1036    1056 ..    1035    1062 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 4.9e-06
   zf-CCHC_6    2 vKCknCGAFGHtarSkr.CPm 21  
                   KC nCG  GH  ++k+ CPm
  KHJ33939.1 1036 RKCANCGQAGHIKTNKKlCPM 1056
                  5**********9999755**9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1090 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       589  (0.0328518); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.26s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 7539.53
//
Query:       KHJ33940.1  [L=424]
Description: putative glucan -beta-glucosidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.5e-17   62.4   8.7    1.4e-16   60.7   8.7    1.7  1  Cellulase  Cellulase (glycosyl hydrolase family 5)
  ------ inclusion threshold ------
        2.9    8.1   6.2        1.1    9.5   0.6    2.6  2  Flg_new    Listeria-Bacteroides repeat domain (List_Bact_rpt)


Domain annotation for each model (and alignments):
>> Cellulase  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   8.7   1.6e-20   1.4e-16       9     250 ..      80     313 ..      71     386 .. 0.68

  Alignments for each domain:
  == domain 1  score: 60.7 bits;  conditional E-value: 1.6e-20
                 EGEEECETTSCGGSHHHHHHHHHHHT-SEEEEEEEC..TGGTTSSTTTGCTHHHHHHHHHHHHHHHHTT-EEEEEEESSTTTCSSSSTTTTHHHHHHH. CS
   Cellulase   9 nlkglstswgnpyttkalidevkdagfntvRlpvsw..gelvenapdykvdenslerveevvkyakenglyvildiHseegwltkadgnssedtaeef. 104
                 + + l+++w +   t++ +de++++g n+vR+pv++   + ++ +p     + +l+ +++++ +a   gl+vild+H  +g  +++  ns  + a ++ 
  KHJ33940.1  80 ATNRLNHHWATW-ITQSDFDEIASMGLNHVRIPVGYwaLNPLPGDPY---VQGQLSYLDQAIGWARTTGLKVILDLHGAPGS-QNGFDNSGRAGAIAWq 173
                 566889999975.8********************9536444544444...5999************************8444.3333333333355556 PP

                 ........HHHHHHHHHHHHTTTTTTE.EEESSSS--STTCTCCTCHHHTTHHHHHHHHHHHHHHHHTTS....SEEEEECHHHHT..BHHHHHCTSGS CS
   Cellulase 105 ........fkklwtqiAerykkndevv.ifelmNEPhgnntgaewtseeadevkayaeeaikaIRavgpn....rliivegnswsg..nldgavlndPn 188
                         ++ +++++A+ry+++++vv  +el+NEP        w  ++  +v++++      +R  g +    +  +++ +sw+g  n+++       
  KHJ33940.1 174 sgenvpntLT-AIQNLANRYASQSDVVtTIELLNEPAN------W-GNDMSAVRKFYYDGWGNVRTKGDTavmiHDAFLDPTSWNGfmNIQS------- 257
                 6666666333.6999******999977369********......7.778899****************984222222444455666333333....... PP

                 SSSTTEEEEEEEETTTHHHTGCGSHSCTHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSTTS CS
   Cellulase 189 dsqdnliysvHfYgpsdfaqtefgkdltdktnlaqrledaakylvekgipviigEfGgsnad 250
                    +n++ + H Y+   + ++ +     ++    q+  + a+++++ ++  i+gE+ + ++d
  KHJ33940.1 258 -GVNNVMLDTHIYQIFSQ-GEVS----MKPCAHVQTACASAGRIRSTDKWTIVGEWTAAQTD 313
                 .359**********4443.3333....34555556666666667777777777777654443 PP

>> Flg_new  Listeria-Bacteroides repeat domain (List_Bact_rpt)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.6   0.00012       1.1       7      46 ..      60      99 ..      56     106 .. 0.92
   2 ?    0.2   0.7     0.096   8.6e+02      21      43 ..     365     387 ..     344     398 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00012
                ETTEEEEEEEETTSB----B--EETTEEEEEEESSTTCCS CS
     Flg_new  7 anGgtvsqtvtygetitlpanptkeGYtFaGWytdsdgtt 46
                anGg v +++ty++t+ + ++  + ++  a W t+sd+++
  KHJ33940.1 60 ANGGGVVDEYTYTATLGKEEATNRLNHHWATWITQSDFDE 99
                69***********************************975 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.096
                 B----B--EETTEEEEEEESSTT CS
     Flg_new  21 titlpanptkeGYtFaGWytdsd 43 
                 +++l a    +G+ F  W t+s 
  KHJ33940.1 365 EAQLDAYEAHTGWIFWTWKTESA 387
                 44444444689*********974 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3085.61
//
Query:       KHJ33941.1  [L=416]
Description: putative peroxisomal biogenesis factor 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.8e-33  114.1   4.8    1.1e-32  113.4   4.8    1.4  1  Pex2_Pex12    Pex2 / Pex12 amino terminal region
     0.0017   18.5   5.4     0.0036   17.4   5.4    1.6  1  zf-C3HC4_4    zinc finger of C3HC4-type, RING
  ------ inclusion threshold ------
      0.072   13.1   3.4       0.27   11.3   3.4    1.9  1  zf-RING_UBOX  RING-type zinc-finger
       0.12   12.2   2.5       0.37   10.7   2.5    1.8  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
        0.9    9.4   5.7       0.41   10.5   1.7    2.2  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
        6.8    6.6  10.3        7.3    6.5   6.0    2.3  2  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> Pex2_Pex12  Pex2 / Pex12 amino terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.4   4.8   3.7e-36   1.1e-32       1     211 [.      82     274 ..      82     288 .. 0.90

  Alignments for each domain:
  == domain 1  score: 113.4 bits;  conditional E-value: 3.7e-36
  Pex2_Pex12   1 deelesllkpalryilrllagqrfpilnyfdEikllldlllelltlksgngTfgeefygLkrvssselkkr....rllskrqrllsllllvlipYlkek 95 
                 deel +llk+++ + l+++ g++    ++ +Ei l ++++l+ l+++ +n+T+g ++++L+ v   +++ r      +sk+q++ + l+ +++ Y++++
  KHJ33941.1  82 DEELLNLLKNQIINGLKYY-GTHIH-DEWAAEITLGIRAILFKLSVWDNNATYGASLQNLQFV---DDRYRgegiVAPSKWQKFSYGLISAGGKYAWTR 175
                 89***************76.76666.7************************************...55555566699********************** PP

  Pex2_Pex12  96 ldelysarerysaealsdearnsreslkkrlkrlllklypfiealyellnlvlqllYL.sgkyysllkrllgiryvrlnpadqrrnarrpsyeylnrql 193
                 ++e++              ++n  + ++ r  +++ kly++++ ++ l++++ + ++L +g+y +ll+r+l++r+++ n++ +    r++s+eylnrql
  KHJ33941.1 176 WEEWI-------------LNMNVGDDSN-RTVKIMSKLYKVLDMIHFLAAITSFSVFLvNGRYRTLLDRILRLRLTPQNNQVS----RQVSFEYLNRQL 256
                 *****.............6777777766.6677*********************************************99999....************ PP

  Pex2_Pex12 194 lwnalkellgllllllll 211
                 +w+a++e+l +ll+ll +
  KHJ33941.1 257 VWHAFTEFLLFLLPLLGV 274
                 **************7654 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   5.4   1.2e-06    0.0036      13      42 .]     354     383 ..     348     383 .. 0.93

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1.2e-06
  zf-C3HC4_4  13 sleCGhsfClsCisslqkepdgeqllCplC 42 
                 s++CG+++C  Ci +  + ++g +++C  C
  KHJ33941.1 354 SIPCGCIYCYFCIARQLELEEGHGWTCIRC 383
                 8***************************99 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   3.4   8.9e-05      0.27       1      31 [.     315     373 ..     315     383 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 8.9e-05
  zf-RING_UBOX   1 CpIClelft..........................dP..lvlpCGHtFCreCl..welsks 31 
                   C IC+e+ +                          +P   + pCG ++C  C+  + l   
    KHJ33941.1 315 CAICYEEQNlstrsgteillsgssgahssaqkditNPyeSI-PCGCIYCYFCIarQ-LELE 373
                   88888866666788888888888888888888888995544.9**********532.3333 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   2.5   0.00012      0.37       1      41 []     315     383 ..     315     383 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00012
                 -TTT-S--SS-E...........................E-TTS--B-CHHHHHHHHC..TSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn..........................elleCkHsfCskCirkilks..rkkvkCPlC 41 
                 C+iC ee+   +                          e+++C+  +C+ Ci + l+       +C  C
  KHJ33941.1 315 CAICYEEQNLSTrsgteillsgssgahssaqkditnpyESIPCGCIYCYFCIARQLELeeGHGWTCIRC 383
                 88888887777778888888888888888888888999**************99998744334447666 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.29   8.7e+02       2       8 ..     315     321 ..     314     326 .. 0.84
   2 ?   10.5   1.7   0.00014      0.41       9      35 ..     348     374 ..     345     385 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.29
  zf-C3HC4_2   2 CpiCldm 8  
                 C+iC+++
  KHJ33941.1 315 CAICYEE 321
                 99**985 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00014
  zf-C3HC4_2   9 lkdpsvvtpCgHvfCqkCilrsLeekn 35 
                 + +p  ++pCg  +C+ Ci+r Le ++
  KHJ33941.1 348 ITNPYESIPCGCIYCYFCIARQLELEE 374
                 6799999**************999765 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.1      0.08   2.4e+02       3      12 ..     313     322 ..     311     327 .. 0.81
   2 ?    6.5   6.0    0.0025       7.3      18      48 ..     355     388 ..     349     390 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.08
                 SB-TTTSSSB CS
  zf-C3HC4_3   3 eeCviClerp 12 
                 ++C iC+e++
  KHJ33941.1 313 SICAICYEEQ 322
                 6899999976 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0025
                 TTEEEEEE-HHHHHHHHH....TT-B-TTT--B-- CS
  zf-C3HC4_3  18 lpCgHlvlCeeCaekllk....rkkkCpiCrrpie 48 
                 +pCg++ +C+ C  + l+    +  +C  C  +++
  KHJ33941.1 355 IPCGCI-YCYFCIARQLEleegHGWTCIRCGDEVK 388
                 79****.*********999999999*****99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       862  (0.0480785); expected 358.6 (0.02)
Passed bias filter:                      608  (0.0339115); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 2916.00
//
Query:       KHJ33942.1  [L=155]
Description: putative ubiquitin-40s ribosomal protein s31 fusion protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.3e-34  116.1   0.6      8e-34  115.2   0.6    1.5  1  ubiquitin      Ubiquitin family
    2.5e-24   85.2   1.0    2.5e-24   85.2   1.0    2.0  2  Ribosomal_S27  Ribosomal protein S27a
    2.7e-16   59.1   0.7      5e-16   58.3   0.7    1.4  1  Rad60-SLD      Ubiquitin-2 like Rad60 SUMO-like
    2.8e-05   24.5   0.3    0.00013   22.4   0.1    2.1  2  Ubiquitin_2    Ubiquitin-like domain
    0.00073   19.6   0.7     0.0016   18.5   0.7    1.6  1  Rad60-SLD_2    Ubiquitin-2 like Rad60 SUMO-like
     0.0044   17.3   0.9     0.0077   16.6   0.0    1.7  2  Ubiquitin_5    Ubiquitin-like domain
     0.0055   16.6   0.0     0.0083   16.0   0.0    1.3  1  TBK1_ULD       TANK binding kinase 1 ubiquitin-like domain
  ------ inclusion threshold ------
      0.013   16.1   0.9      0.018   15.6   0.9    1.2  1  DUF2407        DUF2407 ubiquitin-like domain
      0.021   14.9   1.0        5.9    7.0   0.2    2.4  2  Ubiquitin_4    Ubiquitin-like domain


Domain annotation for each model (and alignments):
>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.2   0.6     4e-37     8e-34       1      72 []       3      74 ..       3      74 .. 0.99

  Alignments for each domain:
  == domain 1  score: 115.2 bits;  conditional E-value: 4e-37
                EEEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEESSC CS
   ubiquitin  1 itvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlrlr 72
                i+vktl+gk+itleve+sdt++++K ki++kegip++qqrLi++Gk+Led rtl++y+iq++stlhlvlrlr
  KHJ33942.1  3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74
                9********************************************************************986 PP

>> Ribosomal_S27  Ribosomal protein S27a
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.3       1.8   3.7e+03      11      19 ..      89      97 ..      83      99 .. 0.77
   2 !   85.2   1.0   1.2e-27   2.5e-24       1      45 []     102     147 ..     102     147 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.8
                   SSEEESS-B CS
  Ribosomal_S27 11 gkverlrke 19
                   +k++++rk+
     KHJ33942.1 89 KKIKHKRKK 97
                   799999986 PP

  == domain 2  score: 85.2 bits;  conditional E-value: 1.2e-27
                    SSSSCCESSSSSEEESS-B-SS-.S-TTSBEEECTTEEEESSTTTE CS
  Ribosomal_S27   1 vlkyYkvddsgkverlrkeCpre.CGaGvfMAehkdRkyCGkCglT 45 
                    vlkyYkvd++gk+erlr+eCp e CGa vfMA ++dR+yCG C+lT
     KHJ33942.1 102 VLKYYKVDGDGKIERLRRECPAEeCGASVFMAAMQDRQYCGLCHLT 147
                    8*******************************************99 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.3   0.7   2.5e-19     5e-16       1      72 []       1      71 [.       1      71 [. 0.98

  Alignments for each domain:
  == domain 1  score: 58.3 bits;  conditional E-value: 2.5e-19
                EEEEEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEEX CS
   Rad60-SLD  1 ikiilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvvi 72
                ++i++k+ +gk+++++V+++ t+ +++++ ++k+gip+ +++rLiF G++L++  t+ d+ i++++t+++v+
  KHJ33942.1  1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71
                89************************************.******************************986 PP

>> Ubiquitin_2  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.1   6.5e-08   0.00013      16      80 ..      13      69 ..       2      70 .. 0.86
   2 ?   -2.9   0.0         5     1e+04      65      72 ..     101     108 ..      84     117 .. 0.61

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 6.5e-08
                 EEEEEETTSBHHHHHHHHHHHH---TTCEEEEEE.-SSSSEEECSSGCCSBCCCCT--TTEEEEE CS
  Ubiquitin_2 16 serrfsksltieelKekLelitGtspasmrLqlyddkkdnevsklddddalLgsYgvkdgmrihV 80
                  +  +++s+ti+++K+k++   G++p+++rL +          k  +d ++L++Y+++  +++h 
   KHJ33942.1 13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFA--------GKQLEDGRTLSDYNIQKESTLHL 69
                 55668899************************99........5667899*********9999995 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 5
                  SBCCCCT- CS
  Ubiquitin_2  65 alLgsYgv 72 
                  a L++Y+v
   KHJ33942.1 101 AVLKYYKV 108
                  34444444 PP

>> Rad60-SLD_2  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.7   8.2e-07    0.0016      16     101 ..      13      89 ..       2     100 .. 0.69

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 8.2e-07
                  EEEEEETT-BHHHHHHHHHHHS-TT-SSS--SCCCEEEEETTEEE-TTSBCCCCS-TTTTTTTS-EEEEEEE---SS----.XX....XX CS
  Rad60-SLD_2  16 gpvkfsdaatvaelkekviaqWPkdkeekpksvndlklilaGkiLennktlkelrlplgevkggvtvmHvvvrenlsekksekk....ak 101
                    ++ ++++t++++k k+     +dke  p  +++ +li aGk Le+ +tl++++++        +++H+v+r     kk++kk     k
   KHJ33942.1  13 ITLEVESSDTIDNVKSKI-----QDKEGIP--PDQQRLIFAGKQLEDGRTLSDYNIQKE------STLHLVLRLRGGAKKRKKKvyttPK 89 
                  556667777777777777.....4555533..34559*****************54433......579***9988888877777644422 PP

>> Ubiquitin_5  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   3.9e-06    0.0077      34      93 ..      13      73 ..       5      78 .. 0.83
   2 ?   -0.4   0.2      0.74   1.5e+03      33      42 ..      82      91 ..      65     112 .. 0.52

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 3.9e-06
  Ubiquitin_5 34 klletkLdvtgkelvskiaeefglkensiKlilngklleldktLeeQgvknnskv.mvLkl 93
                  +le++ + t +++ ski ++ g+  ++ +li  gk+le ++tL + +++++s + +vL+l
   KHJ33942.1 13 ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLhLVLRL 73
                 5566666677889999999*****99***********************999875467765 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.74
  Ubiquitin_5 33 kklletkLdv 42
                 kk+  t  ++
   KHJ33942.1 82 KKVYTTPKKI 91
                 3333332222 PP

>> TBK1_ULD  TANK binding kinase 1 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   4.2e-06    0.0083      19      53 ..      17      51 ..       4      71 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 4.2e-06
    TBK1_ULD 19 ihpyntvaifqeevakqTkiaaekQellfeghrll 53
                +++ +t++++  +++++  i++++Q l+f g++l 
  KHJ33942.1 17 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE 51
                6789****************************973 PP

>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   0.9   9.3e-06     0.018      14      72 ..      13      87 ..       6     108 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 9.3e-06
     DUF2407 14 leLdipdpntttvagLkqliRerlpaelasrrLrLIyaGrlLedttslasslklpees....................v 72
                ++L+++  ++ t+ ++k  i ++    +   + rLI+aG+ Led  +l++   ++e++                    +
  KHJ33942.1 13 ITLEVE--SSDTIDNVKSKIQDKE--GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTlhlvlrlrggakkrkkkvytT 87
                566666..6789999999999987..67777789**************9865555444577777766655543322221 PP

>> Ubiquitin_4  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.2     0.003       5.9       1      32 [.       1      32 [.       1      36 [. 0.94
   2 ?    6.4   0.0    0.0046       9.2      58      86 ..      43      70 ..      39      73 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.003
  Ubiquitin_4  1 lkvtvkkldgeslevvvkqnatvkdLkkaier 32
                 +++ vk l g+++ ++v+++ t+ ++k  i+ 
   KHJ33942.1  1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
                 7899*************************997 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0046
  Ubiquitin_4 58 LsfegekLkddkaklkeygirnkselsFv 86
                 L+f g++L+ d  +l++y i+++s+l+ v
   KHJ33942.1 43 LIFAGKQLE-DGRTLSDYNIQKESTLHLV 70
                 889999986.6789************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1035  (0.0577277); expected 358.6 (0.02)
Passed bias filter:                      595  (0.0331865); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1181.93
//
Query:       KHJ33943.1  [L=230]
Description: putative atp synthase subunit 5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-43  149.2   0.7    1.4e-43  149.0   0.7    1.1  1  OSCP      ATP synthase delta (OSCP) subunit


Domain annotation for each model (and alignments):
>> OSCP  ATP synthase delta (OSCP) subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.0   0.7   7.8e-48   1.4e-43       2     171 ..      49     225 ..      48     226 .. 0.95

  Alignments for each domain:
  == domain 1  score: 149.0 bits;  conditional E-value: 7.8e-48
        OSCP   2 arrYAkAlfelAkekgaleeveeelealeavlaedkklaellsnpavsaeekkdlleelfke....klseavknflkllaenkRlalLpeiaeefeell 96 
                 +++YA Al+++A+++++l+++ + +++l++++ +d+kl ++l  p+++ae+k++++ el k+      ++++knflk+lae++Rl+lL+ ++e+f el 
  KHJ33943.1  49 DGTYAAALYTAASKSQTLDSTDRAMSELKNLYHKDPKLGAILLAPSLNAEDKSAIIVELQKQigvpDKENIIKNFLKTLAEYNRLNLLKGVCEKFGELT 147
                 679***********************************************************98888899***************************** PP

        OSCP  97 aeargiveaeVtsavpLtdeqlekleaalakkl...gkkkvkleekvdpsliGGvvvkvgdkviDgSvkgkLeklkeq 171
                  +arg+ve++V+sa+pL++ +l ++eaa++k+    + kk+k++++v++++iGG++v++gd++iD Sv+++++k+++ 
  KHJ33943.1 148 SAARGEVEVTVISATPLDNRTLGRIEAAVSKSSfigQGKKLKIKNTVKSDIIGGLIVEIGDRTIDLSVSSRVAKMNKL 225
                 *****************************77654556669***********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (230 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.20s 00:00:00.62 Elapsed: 00:00:00.36
# Mc/sec: 1928.84
//
Query:       KHJ33944.1  [L=425]
Description: putative iron-regulated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0018   17.7   9.1       0.12   11.7   0.3    2.6  2  FAM35_C   Protein family FAM35, C-terminal
     0.0093   16.0   2.2      0.011   15.8   0.1    2.0  2  SICA_C    SICA C-terminal inner membrane domain
  ------ inclusion threshold ------
       0.65    9.9   3.2        2.8    7.8   0.6    2.2  2  DUF1068   Protein of unknown function (DUF1068)


Domain annotation for each model (and alignments):
>> FAM35_C  Protein family FAM35, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.3     2e-05      0.12      42      76 ..     126     164 ..      97     171 .. 0.80
   2 !    8.5   3.3    0.0002       1.2      42      80 ..     236     278 ..     208     282 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2e-05
     FAM35_C  42 slsdity.tGC.akCgleletD..enkiykqCysCLplt 76 
                 ++++++y +GC a+C ++l +D  +nki+kqC +C +  
  KHJ33944.1 126 VMPNLIYcKGCkANCDSDLFIDpiKNKIHKQCSNCRFRG 164
                 456777747**668*****999778**********7655 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0002
     FAM35_C  42 slsdity.tGCa.kCgleletD..enkiykqCysCLpltavkr 80 
                 ++++++y +GC  +C ++l +D  +nki+kqC +C + +  +r
  KHJ33944.1 236 VMPNLIYcKGCKcNCDSDLFIDpiKNKIHKQCSNCRFRSYARR 278
                 4677777469954788999888778**********88776665 PP

>> SICA_C  SICA C-terminal inner membrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       1.1   6.8e+03       8      36 ..      25      53 ..      22      56 .. 0.66
   2 !   15.8   0.1   1.8e-06     0.011      93     132 ..     326     365 ..     313     371 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.1
      SICA_C  8 krrrrfrrapaeidgPsvqeqvldhveee 36
                k rr+ +r   +i +P    + + hv+e+
  KHJ33944.1 25 KIRRQNERRQHSIAPPYAVSKQVSHVNEA 53
                54556677778888886666666788775 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 1.8e-06
      SICA_C  93 llveefmgselleeeqvpkeevllegvplevvsieevpsl 132
                 ++ +e +  e +++e vp+e v  e+vp e+v+ e+vp++
  KHJ33944.1 326 VISNETVPHETVPHETVPQETVSHETVPHETVPHETVPQE 365
                 4556777788888888888888888888888888888876 PP

>> DUF1068  Protein of unknown function (DUF1068)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.1     0.025   1.5e+02      41      77 ..     131     172 ..     113     196 .. 0.73
   2 ?    7.8   0.6   0.00046       2.8      41      77 ..     241     282 ..     223     294 .. 0.71

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.025
     DUF1068  41 sscapCsCdCssqsll.....sipeglsnlsltdCakhdpev 77 
                   c+ C+ +C+s  ++     +i ++ sn  +   a+++pe+
  KHJ33944.1 131 IYCKGCKANCDSDLFIdpiknKIHKQCSNCRFRGYARRHPEI 172
                 5799**999999544311112466667777777777777776 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00046
     DUF1068  41 sscapCsCdCssqsll.....sipeglsnlsltdCakhdpev 77 
                   c+ C+C+C+s  ++     +i ++ sn  +   a+++pe+
  KHJ33944.1 241 IYCKGCKCNCDSDLFIdpiknKIHKQCSNCRFRSYARRHPEI 282
                 57*********9544311112566677777777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1147  (0.0639746); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3046.84
//
Query:       KHJ33945.1  [L=145]
Description: putative ribosome assembly protein 3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-20   72.3   1.3    2.4e-20   71.8   1.3    1.3  1  Rsa3         Ribosome-assembly protein 3
  ------ inclusion threshold ------
      0.018   15.2   1.8      0.035   14.2   1.8    1.5  1  UPF0561      Uncharacterised protein family UPF0561
       0.42   10.6   4.7       0.88    9.6   0.0    2.2  2  Wx5_PLAF3D7  Protein of unknown function (Wx5_PLAF3D7)


Domain annotation for each model (and alignments):
>> Rsa3  Ribosome-assembly protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.8   1.3   4.1e-24   2.4e-20       1      46 []      81     126 ..      81     126 .. 0.99

  Alignments for each domain:
  == domain 1  score: 71.8 bits;  conditional E-value: 4.1e-24
        Rsa3   1 FrsfYLqllteeFgdDLDelRkapdFkdksLplLidaLkqGtnlFs 46 
                 F +fYL+++t+eF+dDLD+lR+a dF+++s+++Li+aL+qGt+lFs
  KHJ33945.1  81 FDEFYLKKVTNEFSDDLDQLRNANDFSEDSVAILISALQQGTSLFS 126
                 899******************************************8 PP

>> UPF0561  Uncharacterised protein family UPF0561
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   1.8   5.8e-06     0.035      46      90 ..       5      49 ..       2      74 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.8e-06
     UPF0561 46 kqrrrhtttprrprrpdlqvylprsrdgsepgsnaeaeesnesss 90
                + +r +tt+ +r r+p  qv    s + sep  n++ ee ++   
  KHJ33945.1  5 QIKRAKTTARHRKRKPRTQVSSESSDNDSEPIKNSQGEERKKNKE 49
                4568899999***************************99876554 PP

>> Wx5_PLAF3D7  Protein of unknown function (Wx5_PLAF3D7)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   3.0     0.067     4e+02      10      55 ..      30      73 ..       7      84 .. 0.56
   2 ?    9.6   0.0   0.00015      0.88      95     135 ..      85     125 ..      78     132 .. 0.93

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.067
  Wx5_PLAF3D7 10 tenkkkedfsletnekkkeelelkeddspleekeleeieelneLit 55
                 ++ +++  +s  +++k k++ ++++d +pl+  + ++ e++ +L+t
   KHJ33945.1 30 DNDSEPIKNSQGEERK-KNKENMRSDFEPLN-LCVNNEEKTSQLMT 73
                 2222233333333333.44556666655444.66666777777765 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00015
  Wx5_PLAF3D7  95 YlenvhklinkkLndlnltlddkekiiktwlqwveedfevF 135
                  Yl++v ++  ++L +l ++ d  e+++++++++ ++   +F
   KHJ33945.1  85 YLKKVTNEFSDDLDQLRNANDFSEDSVAILISALQQGTSLF 125
                  ***********************************999888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1595  (0.088962); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1130.74
//
Query:       KHJ33946.1  [L=506]
Description: putative prenylcysteine oxidoreductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-73  247.3   0.1    3.3e-73  246.9   0.1    1.0  1  Prenylcys_lyase  Prenylcysteine lyase
    1.3e-11   44.5   0.0    3.1e-11   43.3   0.0    1.6  1  NAD_binding_8    NAD(P)-binding Rossmann-like domain
    7.6e-10   38.7   0.0    1.4e-09   37.8   0.0    1.4  1  Amino_oxidase    Flavin containing amine oxidoreductase
    2.8e-05   23.9   0.3    4.4e-05   23.2   0.3    1.3  1  DAO              FAD dependent oxidoreductase
    0.00011   21.6   0.0    0.00021   20.7   0.0    1.4  1  Pyr_redox_2      Pyridine nucleotide-disulphide oxidoreductas
     0.0013   18.8   0.0     0.0032   17.5   0.0    1.6  1  NAD_binding_9    FAD-NAD(P)-binding
  ------ inclusion threshold ------
      0.012   14.9   0.1      0.026   13.8   0.1    1.5  1  Thi4             Thi4 family
      0.013   14.3   0.0      0.018   13.9   0.0    1.1  1  Trp_halogenase   Tryptophan halogenase
      0.067   13.8   0.5       0.48   11.0   0.2    2.3  2  Pyr_redox        Pyridine nucleotide-disulphide oxidoreductas
       0.15   11.2   0.1       0.22   10.5   0.1    1.3  1  GIDA             Glucose inhibited division protein A
       0.19   11.4   0.2       0.43   10.2   0.2    1.6  1  ApbA             Ketopantoate reductase PanE/ApbA
       0.31   10.0   0.9       0.45    9.5   0.9    1.2  1  FAD_binding_2    FAD binding domain


Domain annotation for each model (and alignments):
>> Prenylcys_lyase  Prenylcysteine lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  246.9   0.1   2.2e-76   3.3e-73       3     359 ..     113     491 ..     111     495 .. 0.85

  Alignments for each domain:
  == domain 1  score: 246.9 bits;  conditional E-value: 2.2e-76
  Prenylcys_lyase   3 esswsllnllkLlwrYGlsllrlqmwveeildkFlriYelqekgyaFssveellealggkefleltkvtleealekagisekfinelvqavlrv 96 
                      +++   ++ lkL+++YGl +l+ +++ + ild Fl+ Ye   + ++Fss+++ +  lg   + ++t+ t++e lek++i+  f++e+++++ rv
       KHJ33946.1 113 SDTSASWDRLKLILKYGLVPLKFENLKNRILDSFLKFYE--YPIFPFSSLTSTVFDLG---LNSTTSLTGAELLEKNNIKGPFLEEIIKPSARV 201
                      55667899*******************************..89**************9...********************************* PP

  Prenylcys_lyase  97 nYgqsv.kinalvgavslAgaqsglwavegGnkqvcsgllkkskanv.inatVtsielksgessslYevtykk.....es.gtesklyDiVviA 182
                       +gqs+ ++++l+++vs+A   +g+++++gGn++++++++k+s+ +  +n++V++i+ +s +    Y++t  +     +    + + +D Vv++
       KHJ33946.1 202 AFGQSTdTMHGLQTLVSMA--VEGAMSIKGGNQKIFQEMIKSSNCSTfLNTSVKNISPSSIKR--GYNITWLEnieksKLpIINYEHFDSVVLT 291
                      ***776269**********..***********************6655**********44443..4555544322211223567899******* PP

  Prenylcys_lyase 183 tPlqkkesnisfenfs.ppieefkeeyqklvatlvag..rlnssyFglkeksefplstilttenpelei............nslssvssvetsk 261
                      tP+    snis en++ +++++ + +y  l++tl+ +  +ln+ +F++++++ +p ++i+t+ +   ++             ++ s+s+++++ 
       KHJ33946.1 292 TPIP--FSNISLENITlKNVPK-EIRYIPLHVTLFTSphQLNPVFFNIPKDKPVPATVITTLPSIPPPAfkngpkppvkgaPEFISISKIRSTF 382
                      ****..5777777766234554.569*****************************88888877655555789******9888888888888776 PP

  Prenylcys_lyase 262 skeekkakeekvykifSkeplskeqlkkllssy......esvkekeWla.......YPkysppetleefiLhdrlYYlnaiEsaaSamEmsaia 342
                      ++  +++k+e++ykifS + +++  l+ ll+++      +s ++++W+        YP+ +p+ +++e+ L ++ +Y+++iEs  S+mE+sa++
       KHJ33946.1 383 NP--SSQKSENLYKIFSLNAVDAILLSGLLNTTvatnltTSPDTISWYYpyvwenaYPYSHPRDQFDEPQLTHNFWYTSGIESLVSTMETSALM 474
                      66..557999********************54445555566677777655666666************************************** PP

  Prenylcys_lyase 343 gkNvAlLaanrwkeete 359
                      g+NvA+L++n+++e  +
       KHJ33946.1 475 GMNVARLIINDYQETIN 491
                      ************98765 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.0   2.1e-14   3.1e-11       1      55 [.      12      75 ..      12      86 .. 0.85

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 2.1e-14
                   EE--SHHHHHHHHHHHC....C..TEEEEEE-SSSSSSGGG-EECE.TT..CEECTS---EEET CS
  NAD_binding_8  1 IvGaGlsGlvaAylLak....a..gfdvlllekrdrlGGraasyev.pg..vrvdygahifhgs 55
                   I+GaG++G++aAy+L+k    a  +++++++ek+ ++GGr+a+++v ++  ++ ++g + f + 
     KHJ33946.1 12 IIGAGAAGSSAAYYLRKfankAglNVNITVFEKNGYIGGRVATVNVyDDiyQPTELGSTLFIDA 75
                   9***************87654356779*****************99766899999999999774 PP

>> Amino_oxidase  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   0.0   9.5e-13   1.4e-09       2     272 ..      18     303 ..      17     321 .. 0.70

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 9.5e-13
                    HHHHHHHHH....HHTT..EEEEEEESSSSSBTTS-EEEETT...EEEESS--EEETTTHHHHHHHHHTTCCCCEEEESCCGCEEEEETTEECCTT CS
  Amino_oxidase   2 aGLaaArqL....lsaG..fdVtvlEardrvGGRirtvrsdG...ylielGamwftgagnpllellkelgledslslpdpgapkrvlskggrefpg 88 
                    aG +aA++L      aG  +++tv+E ++ +GGR++tv+  +   ++ elG++ f +a++ l +  + ++l+++ +  d++   + ++ +g+e  +
     KHJ33946.1  18 AGSSAAYYLrkfaNKAGlnVNITVFEKNGYIGGRVATVNVYDdiyQPTELGSTLFIDANSILKNATDNFNLNLDSIAYDDS---FGVW-NGHEIVF 109
                    56699****9999888899**********************6577999*********999999999999999988844433...3344.4666666 PP

                    EECHH.HHHHHHHHH...HHHHHCHHHHHHHHHHHHHHHHH.............HHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Amino_oxidase  89 dlspv.paewealle...qgalsaellsleeklrlgleall.............qktldeldldskslaesleelgrrepgdvevwdrliepelfa 167
                    + ++  +a w++l     +g     +l++e   ++ l+++l              +t  +l l+s ++++  e l++++  +   ++ +i p    
     KHJ33946.1 110 TQESDtSASWDRLKLilkYG---LVPLKFENLKNRILDSFLkfyeypifpfsslTSTVFDLGLNSTTSLTGAELLEKNNIKG-PFLEEIIKP---- 197
                    66666577788887733322...33344444444444444444444444777555555555666666666667777777766.777777776.... PP

                    HHHHHHHCHTSTTTTCBHHHHTCCCCHHHHHTSCCCEETTHTHHHHHHHHHTTTTEEEETSEEEEEEEEETTC.....EEEEETTSTEE......E CS
  Amino_oxidase 168 klefasglfagdpselsaklalpllwelegfggslllprgGlsqlpealaeelrgldirlntrVkeikregdg.....vtvtledgevv......e 252
                        + ++ +g     s +  + l+  +++  ++ + ++gG + + + + + +++ +  lnt Vk+i+ ++ +      +++    +++      +
     KHJ33946.1 198 ----SARVAFG----QSTDTMHGLQTLVSMAVEGAMSIKGGNQKIFQEMIK-SSNCSTFLNTSVKNISPSSIKrgyniTWLENIEKSKLpiinyeH 284
                    ....3333332....46666777777888888888888*************.*****************555533311444444555559****** PP

                    ESEEEE-S-HHHHHSSEEES CS
  Amino_oxidase 253 aDaVvvTvplgvlkailfsP 272
                    +D+Vv+T+p++  + i ++ 
     KHJ33946.1 285 FDSVVLTTPIPFSN-ISLEN 303
                    *********98777.55554 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.3   2.9e-08   4.4e-05       2      33 ..      10      49 ..       9      56 .. 0.81

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 2.9e-08
                EEEECTSHHHHHHHHHH...H.HTT....EEEEESSSSTT CS
         DAO  2 vviiGGGiiGlstAyeL...a.rrg....Vtllekgdiag 33
                ++iiG+G +G+s+Ay+L   a ++g    +t++ek+  +g
  KHJ33946.1 10 IAIIGAGAAGSSAAYYLrkfAnKAGlnvnITVFEKNGYIG 49
                9****************5553134699********97776 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   1.4e-07   0.00021       2      91 ..       9     113 ..       8     144 .. 0.78

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.4e-07
                  SEEEE--SHHHHHHHHHHHH......HTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHH...........HHHHCHHHHCCCCHCCTCEEEEESC CS
                  xxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaq......agakvtlvelegtclnggcllskallgvaedaeias...........evvkklnqgielllgeevvkidpgk 82 
                  ++++iG+G+AG +aa +l++       ++++t++ +++   +g++   +++  + +++e  s           + ++++n +++ ++    +++ +g+
   KHJ33946.1   9 RIAIIGAGAAGSSAAYYLRKfankagLNVNITVF-EKNGYIGGRVATVNVYDDIYQPTELGStlfidansilkNATDNFNLNLDSIAYDDSFGVWNGH 105
                  79******************99987669999999.666677888888888888888888777888888888888889999998888888899998888 PP

                  EEEEETEEE CS
                  xxxxxxxxx RF
  Pyr_redox_2  83 kkvklekkk 91 
                   +++ ++++
   KHJ33946.1 106 -EIVFTQES 113
                  .44444443 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   2.2e-06    0.0032       1      42 [.      11      53 ..      11      59 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 2.2e-06
  NAD_binding_9  1 aivGaGprGlavlerLlara.kkkspleitlfdpsep.gagrvw 42
                   ai+GaG++G +++  L + a k + +++it+f+++++ g grv+
     KHJ33946.1 11 AIIGAGAAGSSAAYYLRKFAnKAGLNVNITVFEKNGYiG-GRVA 53
                   8***************9999888999********99956.9987 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   1.7e-05     0.026      20      55 ..      10      50 ..       6      56 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.7e-05
                EEEE--SHHHHHHHHHHHH...C..TTS-EEEEESSSS--T CS
        Thi4 20 vvivGaGssGLtaayylak...k..pdlkvailersvspGG 55
                ++i+GaG++G +aayyl k   k   +++++++e++  +GG
  KHJ33946.1 10 IAIIGAGAAGSSAAYYLRKfanKagLNVNITVFEKNGYIGG 50
                89**************9652224233556788999888887 PP

>> Trp_halogenase  Tryptophan halogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.2e-05     0.018       1      64 [.       9      73 ..       9     114 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.2e-05
                    EEEEE--SHHHHHHHHHHHHHTTTS.SEEEEEE-SSS---SS-EE--THHHHTHHHHT--HHHHC CS
  Trp_halogenase  1 kivivGGGtaGwlaAaalakalkgk.levtlveseeigtvgvGeatipsirkllrlLgideeefl 64
                    +i i+G+G aG+ aA +l+k  ++  l+v +   e+ g +g   at++  + +++  ++    f+
      KHJ33946.1  9 RIAIIGAGAAGSSAAYYLRKFANKAgLNVNITVFEKNGYIGGRVATVNVYDDIYQPTELGSTLFI 73
                    699******************99889887777777778887444888777777766666655444 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.2   0.00032      0.48       1      33 [.       9      47 ..       9      54 .. 0.74
   2 ?   -0.2   0.0         1   1.5e+03      43      69 ..     232     258 ..     227     266 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00032
                EEEEECSSHHHHHHHHHHHHTT......SEEEEEESSSS CS
   Pyr_redox  1 kvvvvGgGyiglElAgalaelg......kkVtvversdk 33
                +++++G+G  g  +A +l++++       ++tv+e +  
  KHJ33946.1  9 RIAIIGAGAAGSSAAYYLRKFAnkaglnVNITVFEKNGY 47
                79****************777733333356677776655 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1
                 HHHHHHHHHHTTEEEECSEEEEEEEEE CS
   Pyr_redox  43 skilqeklekngievllntkveeiegs 69 
                 +ki+qe ++  +    lnt+v++i  s
  KHJ33946.1 232 QKIFQEMIKSSNCSTFLNTSVKNISPS 258
                 58999999**************99866 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   0.00015      0.22       2      24 ..      10      32 ..       9      64 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00015
                EEEE-SSHHHHHHHHHHHHTT-- CS
        GIDA  2 viViGgGhAGceAAlaaarlGak 24
                + +iG+G AG+ AA+ + +   k
  KHJ33946.1 10 IAIIGAGAAGSSAAYYLRKFANK 32
                78*************97654333 PP

>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.2   0.00029      0.43       1      22 [.      10      32 ..      10      46 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00029
                EEEES-SHHHHHHHHHHHH.HTH CS
        ApbA  1 iailGaGaiGsllaakLak.aga 22
                iai+GaGa Gs  a++L k a+ 
  KHJ33946.1 10 IAIIGAGAAGSSAAYYLRKfANK 32
                89***************885543 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.9    0.0003      0.45       2      36 ..      10      50 ..       9      55 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.0003
                   EEEE--SHHHHHHHH....HHHHTTT..-EEEEESSSGGGS CS
  FAD_binding_2  2 viViGsGlAGLaAAl....eaaeaGl..kvavvekeqefgg 36
                   + +iG+G+AG +AA+     a++aGl  +++v ek ++ gg
     KHJ33946.1 10 IAIIGAGAAGSSAAYylrkFANKAGLnvNITVFEKNGYIGG 50
                   67************933333456888556678888887777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       580  (0.0323498); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.37
# Mc/sec: 4056.18
//
Query:       KHJ33947.1  [L=114]
Description: hypothetical protein EV44_g0960 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       701  (0.0390987); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.23s 00:00:00.57 Elapsed: 00:00:00.34
# Mc/sec: 991.63
//
Query:       KHJ33948.1  [L=912]
Description: hypothetical protein EV44_g3923 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-06   29.1   0.0    3.4e-06   27.5   0.0    1.9  1  gag-asp_proteas  gag-polyprotein putative aspartyl protease
    5.5e-06   26.9   0.0    1.6e-05   25.4   0.0    1.8  1  Asp_protease_2   Aspartyl protease
     0.0018   18.0   0.0     0.0038   17.0   0.0    1.4  1  RVP_2            Retroviral aspartyl protease
  ------ inclusion threshold ------
      0.015   15.6   0.0      0.057   13.7   0.0    2.1  1  Retrotrans_gag   Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> gag-asp_proteas  gag-polyprotein putative aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.0   7.5e-10   3.4e-06      15      90 ..     709     787 ..     703     789 .. 0.85

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 7.5e-10
                      ETT-SS-EEEHHHHHHTTGGGGEB..TT--EE-TTSTT-EEEEEEEEEE.EET.TEEEEEEEEEESS...SSEEEEHHHH CS
  gag-asp_proteas  15 DTGAsstiiseelaerlglsrkedkgkvevktangeveakrvrldsvkiggie.lrnvsavvlegel...ddlLLGldfL 90 
                      D GA+  +is++la++l + +k+ + +++++ta+g ++++  ++ s++ig +e  r+v++++l++ +   + lLLGl +L
       KHJ33948.1 709 DQGADVCLISASLAKALAVVHKILPVPMRFGTADGGTTVA-KHFTSIQIGVAEiWRKVDVLILPQVKndpHSLLLGLPWL 787
                      88*********************************98776.5788888888874689******9664233778***9887 PP

>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   3.6e-09   1.6e-05      14      90 .]     708     786 ..     703     786 .. 0.92

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 3.6e-09
  Asp_protease_2  14 lDTGasttlispelaeklglkvreseltvrvsgaggevkarlvrldslklgglt.lknvpalvld..lgeeidglLGmdf 90 
                      D Ga+++lis +la++l +  + +++++r+ +a+g ++++++ + s+++g ++ ++ v++l+l+  +++++ +lLG+++
      KHJ33948.1 708 ADQGADVCLISASLAKALAVVHKILPVPMRFGTADGGTTVAKH-FTSIQIGVAEiWRKVDVLILPqvKNDPHSLLLGLPW 786
                     699*****************999999**********9988865.889****99879*********98899999****986 PP

>> RVP_2  Retroviral aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   8.4e-07    0.0038      38     124 ..     709     797 ..     704     807 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 8.4e-07
       RVP_2  38 dsGasHsFiskafvsklklkveaLstpllietPvgssvtakeicksveieiqgiefladlilLdlkdlD...viLgmdWLsknkanidca 124
                 d Ga    is + ++ l +  + L +p+   t  ++  t+ +  +s++i +++i   +d+++L+  + D   ++Lg+ WL + +a id+ 
  KHJ33948.1 709 DQGADVCLISASLAKALAVVHKILPVPMRFGTA-DGGTTVAKHFTSIQIGVAEIWRKVDVLILPQVKNDphsLLLGLPWLYQVNARIDIP 797
                 8899999**************************.666666777789*****************9998886669**************985 PP

>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.3e-05     0.057      30      91 ..     181     256 ..     158     261 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.3e-05
  Retrotrans_gag  30 kdlkkaflktflpserkdqleeelsslrQ.gtesvreYvtrfktladqlde.vlte.............eakiekfl 91 
                     ++++++f     p e++ q ++   +lrQ ++es+r+Y+ r + +++ +    ++e             e+++ +f+
      KHJ33948.1 181 DEFTRRFELVVAP-ENEPQQQKMVNELRQeKDESLRDYFSRAQGILRVIGAdDSSEyrgvassankfviEMMVDRFV 256
                     6899999999999.566666666******************999999888443333666666666666555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (912 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       962  (0.0536561); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.38
# Mc/sec: 7130.46
//
Query:       KHJ33949.1  [L=505]
Description: putative family decarboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-07   30.1   0.1    0.00079   18.4   0.0    2.4  2  OCD_Mu_crystall  Ornithine cyclodeaminase/mu-crystallin famil


Domain annotation for each model (and alignments):
>> OCD_Mu_crystall  Ornithine cyclodeaminase/mu-crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   4.4e-08   0.00079      35     170 ..      48     190 ..      12     210 .. 0.64
   2 !    9.3   0.0   2.8e-05      0.49     188     240 ..     228     286 ..     222     336 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 4.4e-08
                      -CE----EEEEECCGTEEEEEEEEEETTTTEEEEEEEEE.........ETTTCCCTSSSEEEEEEE.E-TTT--EEEEEE-HHHHHHHHHHHHH CS
  OCD_Mu_crystall  35 kvkkpprvalevkdsrgelevmpaylagrellgvKlvns.........hpenkksglptvtalvvL.ndpetGvplalmdatlltalRTaAvsa 118
                      + ++p ++++  +++      mp+ + g  +++vK+ ++          + nk ++   v   + L + +  G+p a ++   + a RTa +s 
       KHJ33949.1  48 TDDQPHKTKVSARNG-TTTLFMPSVISG--SMAVKVATFttpsaytgsSAINKSNSKHEVSPQGALtLMTAEGIPFAFINSREIIAFRTALTSS 138
                      455555666666662.223357777777..666665443111110001344555555555555555135788*********************9 PP

                      HHHHHHS-TT--EEEEE--SHHHHHHHHHHCCCS-..-SEEEEE-SSHHHHHHH CS
  OCD_Mu_crystall 119 vaakyLarkdasvlaiiGaGvqaetqlealkavld..ikevriydrdeeaaekf 170
                      +      r   +vl+ +G+G+qa+ +++    +++  ik+v   +r+ + ++++
       KHJ33949.1 139 LLIS--RRSKVKVLTCFGCGRQAYWHVRLTLLLRGssIKKVNFINRTLSDRAAA 190
                      8654..5667899************999877777666****9999987665543 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 2.8e-05
                      HHHHTTSSEEEE----SS.....-SB-GG.GS-TT-EEEE-S--STT--SB-HHHHHCC CS
  OCD_Mu_crystall 188 eeavegadivvtvTaaka.....pilkae.wvkpGahinavgadapgkteLdddilkra 240
                      ++ v  ad++  +T+++      +il+ +   k   +i avg+  ++  eL ++i+ +a
       KHJ33949.1 228 KTQVRSADVIFCTTPSTVplfdpTILTSNeGRKRARLIVAVGSYSSDMIELPPEIIDQA 286
                      57899*************7777777765414567789******************9887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3514.00
//
Query:       KHJ33950.1  [L=700]
Description: hypothetical protein EV44_g1136 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (700 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       704  (0.039266); expected 358.6 (0.02)
Passed bias filter:                      249  (0.0138881); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 4808.76
//
Query:       KHJ33951.1  [L=349]
Description: hypothetical protein EV44_g4078 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       251  (0.0139997); expected 358.6 (0.02)
Passed bias filter:                      218  (0.0121591); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2552.36
//
Query:       KHJ33952.1  [L=574]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
        1.9    8.2   4.7        5.1    6.9   4.7    1.7  1  DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit


Domain annotation for each model (and alignments):
>> DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   4.7   0.00028       5.1       3      24 ..     464     487 ..     463     492 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.00028
                     -SSS--B--..--SSS----SSS- CS
  DNA_RNApol_7kD   3 CgeCgaevs..lkkgdpiRCkeCG 24 
                     Cg+Cg+ +   ++  ++ +Ck+CG
      KHJ33952.1 464 CGNCGSTMHteDICMAVTKCKNCG 487
                     *****9876558999********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1180  (0.0658152); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.46
# Mc/sec: 3765.55
//
Query:       KHJ33953.1  [L=330]
Description: putative snare domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-23   84.0   5.0    1.1e-23   84.0   5.0    1.6  2  Syntaxin      Syntaxin
    1.2e-13   50.8   0.1    2.6e-13   49.7   0.1    1.6  1  SNARE         SNARE domain
    0.00071   19.6   0.0    0.00082   19.4   0.0    1.4  1  ETRAMP        Malarial early transcribed membrane protein (ET
     0.0099   16.0   1.1     0.0099   16.0   1.1    2.4  2  RP-C_C        Replication protein C C-terminal region
  ------ inclusion threshold ------
      0.023   13.4   1.0      0.037   12.7   0.2    1.6  2  Tweety        Tweety
      0.027   14.6   0.1      0.061   13.5   0.1    1.6  1  CD225         Interferon-induced transmembrane protein
       0.78    9.2  11.8       0.21   11.1   4.8    2.1  2  Allexi_40kDa  Allexivirus 40kDa protein
        2.3    8.0   7.0         11    5.8   0.1    2.7  2  SKA2          Spindle and kinetochore-associated protein 2
        4.8    5.6   7.2         12    4.3   1.9    2.1  2  FUSC          Fusaric acid resistance protein family
        6.6    6.7   6.6       0.69    9.8   0.1    2.6  4  TRIQK         Triple QxxK/R motif-containing protein family


Domain annotation for each model (and alignments):
>> Syntaxin  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.0   5.0   5.9e-27   1.1e-23       3     199 ..      61     251 ..      59     252 .. 0.93
   2 ?   -2.6   0.6         2   3.5e+03      14      35 ..     261     282 ..     254     290 .. 0.34

  Alignments for each domain:
  == domain 1  score: 84.0 bits;  conditional E-value: 5.9e-27
    Syntaxin   3 effkeveeikkeiekleeevkklkkqneesktstraksvklkkrmesdikeikkraesvkarLeaLdksnkenekksgegsavdRirksqtaaLrkklk 101
                 +f++ v  +k++i++l++++++++  +++ ++s++++s+    ++e ++++ + +  +++ +++ L+ ++++++   g++s    +++ q++ L++++ 
  KHJ33953.1  61 DFLARVDLVKSDIRSLTSSIQEISTLHQRALSSPDSSSS---GQLEDLVTRTQLKNSQIRDQIKFLEGDAAKTQ--DGSKS----VKSKQANQLKSEFG 150
                 89*************************************...9999***********************99887..33333....567899******** PP

    Syntaxin 102 evmteynelrekireeykerieRrlevtGkevseeeieelietge.sevflqkllqeq.rga.realseieeRhkevlelekslkeLhqlFldmavLVE 197
                 +v+++y++ + + +++y+e+i R++ ++  e+se e++e  + +  se ++q++l+ +  g+  + l  ++ Rh+e++++e  l +L  +F d+a +VE
  KHJ33953.1 151 KVLNNYRQEELTYQKRYREQIARQYRIVNPEASEAEVNEATNLDWrSEGVFQTVLKGNrSGHaTTVLGAVRARHNELQRIEATLTDLAAIFADLAQIVE 249
                 ****************************************998855999*******99666678889999***************************** PP

    Syntaxin 198 eQ 199
                 +Q
  KHJ33953.1 250 TQ 251
                 *9 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2
    Syntaxin  14 eiekleeevkklkkqneeskts 35 
                 +  + +++v++ ++q +e k+s
  KHJ33953.1 261 NAMQTTDHVENANHQIDEAKKS 282
                 2222233333333332222222 PP

>> SNARE  SNARE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.7   0.1   1.5e-16   2.6e-13       2      52 ..     254     304 ..     253     305 .. 0.97

  Alignments for each domain:
  == domain 1  score: 49.7 bits;  conditional E-value: 1.5e-16
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXXXXXXXXXXXXXXXXXXX CS
       SNARE   2 mvDrIdtnVenaqsnveraqkeLkkavkyqksnRklkciillilviillvv 52 
                 ++ + ++n ++++++ve+a+ +++ a k++  +Rklk+++ll+ ++i+l++
  KHJ33953.1 254 IIENVEQNAMQTTDHVENANHQIDEAKKSAARARKLKWYCLLVGILIVLAI 304
                 899**********************************************98 PP

>> ETRAMP  Malarial early transcribed membrane protein (ETRAMP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   4.6e-07   0.00082      32      80 ..     228     317 ..      40     320 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 4.6e-07
      ETRAMP  32 k.........................................ekakkaikkiddkiekkkkkkKliiistiatalallvasalGlgiykk 80 
                 +                                         e+a+++i++ +++  +  k k  +++  i ++la+++++ lG+g+ k 
  KHJ33953.1 228 QrieatltdlaaifadlaqivetqdpiienveqnamqttdhvENANHQIDEAKKSAARARKLKWYCLLVGILIVLAIALGIGLGVGLTKA 317
                 0555555555555555555555555666666666667778889****************999************************8875 PP

>> RP-C_C  Replication protein C C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   3.3      0.39     7e+02      17      75 ..      94     148 ..      63     196 .. 0.53
   2 !   16.0   1.1   5.5e-06    0.0099      11      80 ..     215     285 ..     209     291 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.39
      RP-C_C  17 prkatlaeleelleelealreevenal..esalkaenssanesqnerhiqnsnpdsssese 75 
                 p ++++ +le+l+++ +    ++++++         + +a ++q++++  +s++ ++ +se
  KHJ33953.1  94 PDSSSSGQLEDLVTRTQLKNSQIRDQIkfL------EGDAAKTQDGSKSVKSKQANQLKSE 148
                 445566666777766666666666666331......2222222223333333332222222 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 5.5e-06
      RP-C_C  11 alverlp.rkatlaeleelleelealreevenalesalk.aenssanesqnerhiqnsnpdsssesepasek 80 
                 +++ +++ r+++l+++e+ l++l+a+ +++++++e++++  en + n+ q+++h +n n+ ++ e ++++++
  KHJ33953.1 215 TVLGAVRaRHNELQRIEATLTDLAAIFADLAQIVETQDPiIENVEQNAMQTTDHVENANH-QIDEAKKSAAR 285
                 566677779*************************888872588889999**********9.44454444444 PP

>> Tweety  Tweety
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.58     1e+03     137     171 ..      59      93 ..      49     111 .. 0.75
   2 ?   12.7   0.2   2.1e-05     0.037      89     210 ..     198     317 ..     192     325 .. 0.73

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.58
      Tweety 137 rtdlletlrlvqeqveevvqqlselpflkkkdvsl 171
                 + d+l+ + lv++ +++++++++e+++l++  +s 
  KHJ33953.1  59 QSDFLARVDLVKSDIRSLTSSIQEISTLHQRALSS 93 
                 66788888889999999999999998877766654 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 2.1e-05
      Tweety  89 dGvlqltyslrkanhtlagikklvseteesleekleeeLtkleeifakrtdlletlrlvqeqveevvqqlselpflkkkdvsltelaeqvelvelyRWl 187
                 +Gv q +  +++  h+ +++   v + +++l+ ++e +Lt l  ifa  ++++et   + e+ve+ + q+++   +++++ +++e  ++ +   +++W 
  KHJ33953.1 198 EGVFQTVLKGNRSGHA-TTVLGAVRARHNELQ-RIEATLTDLAAIFADLAQIVETQDPIIENVEQNAMQTTD--HVENANHQIDEAKKSAARARKLKWY 292
                 6777777777766665.566677888888885.79************9999999999999988875555444..5667889999999999999999999 PP

      Tweety 188 aylllllldlviClv..lllglark 210
                   l  +l+ l i l   l +gl + 
  KHJ33953.1 293 CLLVGILIVLAIALGigLGVGLTKA 317
                 8876555555554440044555555 PP

>> CD225  Interferon-induced transmembrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   3.4e-05     0.061      35      67 ..     271     303 ..     262     304 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.4e-05
       CD225  35 kmvGdvegAqsasstAkllniialvlgiiliil 67 
                 +++ ++++A++++ +A++l +  l++gi+++++
  KHJ33953.1 271 NANHQIDEAKKSAARARKLKWYCLLVGILIVLA 303
                 5677899**********************9986 PP

>> Allexi_40kDa  Allexivirus 40kDa protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   4.8   0.00011      0.21      58     173 ..      41     160 ..      38     178 .. 0.78
   2 ?    2.4   0.7     0.052        93      76     133 ..     223     275 ..     161     290 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00011
  Allexi_40kDa  58 shdvdsiinklnpvsllsqttlLsel...rdalrtltklldklksvekklelsaetasdskllkklesietsleelhakldelsssetsesegPsss 151
                   +h+ +s  + l+p+++lsq+  L+++   ++++r lt+ ++++++++++   s ++ s+ +l + ++  + +  ++  +++ l   ++++++g +s 
    KHJ33953.1  41 NHNSNSHPQALQPSTTLSQSDFLARVdlvKSDIRSLTSSIQEISTLHQRALSSPDSSSSGQLEDLVTRTQLKNSQIRDQIKFLEGDAAKTQDGSKSV 137
                   7999999999***********9999543489************************999999888888888888899999988888888777776655 PP

  Allexi_40kDa 152 ptkassa.eaaasedLpiyqakh 173
                   ++k++++ +++  + L+ y+ + 
    KHJ33953.1 138 KSKQANQlKSEFGKVLNNYRQEE 160
                   55544430333344477776665 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.052
  Allexi_40kDa  76 qttlLselrdalrtltklldklksvekklelsaetasdskllkklesietsleelhak 133
                   + ++L+++ ++l+ l  ++ +l+++ +++   +e+ +++     +++ ++ +e+ +++
    KHJ33953.1 223 RHNELQRIEATLTDLAAIFADLAQIVETQDPIIENVEQNA----MQTTDH-VENANHQ 275
                   3344444444444444444444444333332222222211....222222.2222222 PP

>> SKA2  Spindle and kinetochore-associated protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.1    0.0063        11      44      74 ..      63      93 ..      57     130 .. 0.81
   2 ?    4.9   1.1     0.013        22      44      94 ..     227     278 ..     224     289 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0063
        SKA2 44 lerlkkvkeelqaLkeqceellaekkelidk 74
                l+r+  vk+++ +L + ++e+++  ++  ++
  KHJ33953.1 63 LARVDLVKSDIRSLTSSIQEISTLHQRALSS 93
                789999*****************99976655 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.013
        SKA2  44 lerlkkvkeelqaLkeqceellaekkelidkirttlvanrellqqLqasa.e 94 
                 l+r+++  ++l+a+ +++ ++ +++  +i+ ++++ ++++  +++ ++++ e
  KHJ33953.1 227 LQRIEATLTDLAAIFADLAQIVETQDPIIENVEQNAMQTTDHVENANHQIdE 278
                 68999999***************************99999988888887743 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.3    0.0079        14     219     316 ..      64     158 ..      56     197 .. 0.79
   2 ?    4.3   1.9    0.0067        12     212     282 ..     218     286 ..     202     292 .. 0.73

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0079
        FUSC 219 ralrrllsrmlallallsslarllarlraeeaaavpe.laallaelaaleaaaaaealeaalaalrarlralrrale.adadtaalllarlaellaela 315
                 +++    s++ +l+++++++ +l++r  ++++ +    l++l+ +++        ++++++++ l+ ++++++   +  ++ +a  l +++  +l +++
  KHJ33953.1  64 ARVDLVKSDIRSLTSSIQEISTLHQRALSSPDSSSSGqLEDLVTRTQL-----KNSQIRDQIKFLEGDAAKTQDGSKsVKSKQANQLKSEFGKVLNNYR 157
                 677778899999999999999999998888888866669999988888.....6899999999999999999888877778888888888888888887 PP

        FUSC 316 q 316
                 q
  KHJ33953.1 158 Q 158
                 7 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.0067
        FUSC 212 prirararalrrllsrmlallallsslarllarlraeeaaavpelaallaelaaleaaaaaealeaalaal 282
                 + +rar + l+r+ + +++l a++  la+  ++ +   ++ ++   ++ +++++  a ++ ++ ++ +a+ 
  KHJ33953.1 218 GAVRARHNELQRIEATLTDLAAIFADLAQIVETQDPIIENVEQNAMQTTDHVEN--ANHQIDEAKKSAARA 286
                 567899999999999999999999999999999998888888888888888888..333444444444443 PP

>> TRIQK  Triple QxxK/R motif-containing protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       5.8     1e+04      38      52 ..      70      84 ..      68      86 .. 0.83
   2 ?   -3.0   0.1       3.9   6.9e+03      24      38 ..     126     140 ..     109     150 .. 0.64
   3 ?   -1.1   0.1         1   1.8e+03      15      24 ..     166     175 ..     157     186 .. 0.83
   4 ?    9.8   0.1   0.00039      0.69      25      63 ..     263     303 ..     256     308 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 5.8
       TRIQK 38 kAeakksasgikevl 52
                k +++  +s i+e+ 
  KHJ33953.1 70 KSDIRSLTSSIQEIS 84
                889999999999985 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.9
       TRIQK  24 dykknKdvlkatklk 38 
                 d+ k++d  k++k k
  KHJ33953.1 126 DAAKTQDGSKSVKSK 140
                 566666777777765 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1
       TRIQK  15 qYRKqiGkQd 24 
                 +YR qi +Q 
  KHJ33953.1 166 RYREQIARQY 175
                 79****9985 PP

  == domain 4  score: 9.8 bits;  conditional E-value: 0.00039
       TRIQK  25 ykknKdvlkatklkAeakksasgikevllv..lvailvlll 63 
                  +++ +v  a ++  eakksa   +  ++   lv+il++l+
  KHJ33953.1 263 MQTTDHVENANHQIDEAKKSAARARKLKWYclLVGILIVLA 303
                 567777888888889**************8889****9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1942  (0.108316); expected 358.6 (0.02)
Passed bias filter:                      832  (0.0464053); expected 358.6 (0.02)
Passed Vit filter:                       103  (0.00574488); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.58u 0.30s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 2343.55
//
Query:       KHJ33954.1  [L=368]
Description: putative u3 small nucleolar rna-associated protein 5 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-23   82.7   0.3      3e-23   82.1   0.3    1.3  1  Utp12           Dip2/Utp12 Family
  ------ inclusion threshold ------
       0.17   12.0   2.4          6    7.0   0.3    2.3  2  Arch_flagellin  Archaebacterial flagellin


Domain annotation for each model (and alignments):
>> Utp12  Dip2/Utp12 Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.1   0.3   3.4e-27     3e-23       1     106 [.     158     261 ..     158     262 .. 0.98

  Alignments for each domain:
  == domain 1  score: 82.1 bits;  conditional E-value: 3.4e-27
                 HHHHHHH.HHHSS-TTTHHHHHHCS-CTCHHHHHHHHHHHH.HTTTTHHHHHHHHHHHHHHHHHHHHHSH.HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Utp12   1 ndeelleevlekippsdirltvlrLpssyvlkLLeflaerlaeksphlelllrwlkallrvHgsylvaspsdlvpaLrslqkslrerlktlskllglnl 99 
                 nd +lle++++++++++ir t++rL s ++ kLL+ laerl++++  +  l+ w++++l++Hg+yl+a+++ lv++L++l k+++er + l+++l l+ 
  KHJ33954.1 158 NDIALLETCFHTSDTNTIRATIQRLESCLAAKLLQKLAERLHKRPGIAGKLMVWVQWTLVAHGGYLAAQKG-LVKSLAELTKVMDERSQGLQSILLLK- 254
                 6789******************************************************************8.**************************. PP

                 HHHHHHH CS
       Utp12 100 grLdyll 106
                 g+Ld++ 
  KHJ33954.1 255 GKLDMIE 261
                 ****986 PP

>> Arch_flagellin  Archaebacterial flagellin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.3   0.00067         6      80     138 ..      32      93 ..      25     147 .. 0.78
   2 ?    4.7   0.1    0.0035        31      62     127 ..     280     337 ..     247     356 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00067
                     --EEGGG-EEEEEESS--EE--E..................T-EE-TT-EEEEEEE--...T CS
  Arch_flagellin  80 spidlnkttisvtddgqetlltadefgivvisdtdgsltngdevlekgekvelevnvn...e 138
                     +++  n ++i++t+++  +++++ +++i+v ++ ++++  +++++ +g++  l  n +    
      KHJ33954.1  32 KSVVSNGESIFWTNSDNIQNINSISSDISVEENDSDEAGISQNLIAEGDTTMLDANSTagdL 93 
                     56677888999999998888888899************999*************99865551 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0035
                     -SSSSSEEEEEEE--TTS--EEGGG-EEEEEESS--EE--E..................T-EE-TT CS
  Arch_flagellin  62 tngtineitiyvklnaGsspidlnkttisvtddgqetlltadefgivvisdtdgsltngdevlekg 127
                     ++++ ++  iyv    Gs+ i+ ++ + +++d++    l+    +i++ sd+++++   + + +++
      KHJ33954.1 280 DEDDDSNSIIYVE-GQGSDGIEAKEASKNFVDEN----LND---TISEKSDMSNEMPTINGLASDS 337
                     455666699****.********************....555...4445555555544443333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       686  (0.038262); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2628.61
//
Query:       KHJ33955.1  [L=728]
Description: putative pheromone-regulated multispanning membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.45   10.7   2.8       0.42   10.8   0.2    2.3  3  BORCS6       BLOC-1-related complex sub-unit 6
       0.62   10.7   6.3        1.2    9.8   0.1    3.7  5  Phage_TAC_3  Phage tail assembly chaperone proteins, TAC


Domain annotation for each model (and alignments):
>> BORCS6  BLOC-1-related complex sub-unit 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   4.7e-05      0.42      57     144 ..     109     197 ..      74     204 .. 0.75
   2 ?   -3.6   0.0       1.3   1.1e+04      53      84 ..     478     509 ..     467     511 .. 0.79
   3 ?   -2.9   0.2      0.81   7.3e+03      36      61 ..     586     610 ..     565     617 .. 0.48

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 4.7e-05
      BORCS6  57 vlsdlereaqkvaasvdnllenlssklhsisaltvgnietykdav.dklgdavDssiksmYqLlAkaEE.lskamkPv.eklakqikeikr 144
                  ++ l   a+++++ +d l+  +  +l+ +s++ +  i+++ ++  + ++ av  s+ +  +L+ k+   l++++ Pv e+la   k+ ++
  KHJ33955.1 109 GINSL--TAETITKTIDGLMDMMMDTLEIVSSIVLFVINMFTQTYaCLITFAVTGSLTASIELIEKVGKfLNESIGPVtETLAGDTKKFQD 197
                 45544..5889*****************************988752667889999999999999998654889999983457776666665 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 1.3
      BORCS6  53 idpnvlsdlereaqkvaasvdnllenlssklh 84 
                 i+++v   +++ ++++   +d+ +++++ +l+
  KHJ33955.1 478 INKDVFGWVQTGSEAINGTIDQFTNEMTKVLN 509
                 66677777788888899999999999887775 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 0.81
      BORCS6  36 tpsaslskqllaaqipeidpnvlsdl 61 
                  +s++++  + ++ i+++  ++l+++
  KHJ33955.1 586 LTSDKIT-SAVTKVIAKLQDSILEEI 610
                 3333332.233444444554554444 PP

>> Phage_TAC_3  Phage tail assembly chaperone proteins, TAC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   0.00013       1.2       3      70 ..      76     147 ..      74     153 .. 0.73
   2 ?   -2.9   0.0       1.1     1e+04      52      68 ..     190     205 ..     161     207 .. 0.56
   3 ?   -1.6   0.0      0.43   3.8e+03      48      71 ..     243     266 ..     234     279 .. 0.55
   4 ?    1.7   0.1     0.042   3.8e+02      42      97 ..     455     508 ..     432     514 .. 0.83
   5 ?   -2.4   0.0      0.78     7e+03      84     101 ..     586     603 ..     579     611 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00013
  Phage_TAC_3   3 ikikklrkksaeVktsikvikkaqklqigllesq.e.....avdftndeltklaaledqlelldslleFvsdvl 70 
                   +i+k r++s+e  ts++++  a +     l +  +         t d l  ++ + d le++ s++ Fv++++
   KHJ33955.1  76 YNIEKAREESLEACTSVENVGSAMASMPHYLSKGiNsltaeTITKTIDGL--MDMMMDTLEIVSSIVLFVINMF 147
                  5899****************987665443333330223222455666777..88999999*********99987 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.1
  Phage_TAC_3  52 ledqlelldslleFvsd 68 
                    d ++++d+l +F+++
   KHJ33955.1 190 G-DTKKFQDGLNNFLKK 205
                  2.333466666666655 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.43
  Phage_TAC_3  48 klaaledqlelldslleFvsdvlk 71 
                  +l+ l+  l    ++++F  +v+k
   KHJ33955.1 243 ELDKLNSSLPNFADVQKFTENVVK 266
                  223344444444444444444444 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.042
  Phage_TAC_3  42 tndeltklaaledqlelldslleFvsdvlklsdkevekieetleveelmelvsylv 97 
                  ++d+ +k  a++ +  + ++ +   +dv+++ +   e i+ t+  +++ + +++++
   KHJ33955.1 455 SLDDASKQWAIDANGVIYQTNMRINKDVFGWVQTGSEAINGTI--DQFTNEMTKVL 508
                  56888888888888878899999999***************77..58888888876 PP

  == domain 5  score: -2.4 bits;  conditional E-value: 0.78
  Phage_TAC_3  84 leveelmelvsylvlrlq 101
                  l  +++   v++++++lq
   KHJ33955.1 586 LTSDKITSAVTKVIAKLQ 603
                  444556666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (728 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       827  (0.0461264); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 5067.16
//
Query:       KHJ33956.1  [L=629]
Description: putative chromosome 10 open reading frame 76 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.8e-82  274.2   7.0    4.8e-81  271.8   1.9    2.5  2  DUF1741   Domain of unknown function (DUF1741)
  ------ inclusion threshold ------
      0.078   13.5   0.0       0.22   12.1   0.0    1.7  1  TipAS     TipAS antibiotic-recognition domain


Domain annotation for each model (and alignments):
>> DUF1741  Domain of unknown function (DUF1741)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.6   0.2    0.0025        23      58      91 ..     337     370 ..     334     372 .. 0.93
   2 !  271.8   1.9   5.4e-85   4.8e-81       2     232 ..     407     621 ..     406     622 .. 0.98

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0025
     DUF1741  58 raLlslvrflttyasdlkskpqidtlldslvnll 91 
                 ++Llsl+++l+++a++ +++++ ++l+  ++ +l
  KHJ33956.1 337 SSLLSLISYLLQHAHTSSRTTNYSHLCLLIIRIL 370
                 69************************99999887 PP

  == domain 2  score: 271.8 bits;  conditional E-value: 5.4e-85
     DUF1741   2 vlaavilDllvdfinhnLrkrldvelytlalgillrllsylkrskvRLayhWselwraLlslvrflttyasdlkskpqidtlldslvnllalfisaGdt 100
                  +aa++lD ++d+inhnLr+rldv+ly l++gi+  +lsyl+rs++RL+yhWsel+r+Llslvrfltty+sdl+  ++id l+d+lvnl+al++++G++
  KHJ33956.1 407 SIAAILLDAMLDGINHNLRRRLDVDLYILCIGIIYSILSYLSRSRTRLKYHWSELYRSLLSLVRFLTTYTSDLRGLKNIDILIDNLVNLIALSLCCGEA 505
                 6899*********************************************************************************************** PP

     DUF1741 101 fLpdpasYddLfYklvetgevltkfrdlyklalrasvtteseakesakkatnsidnlisvsthfkelleekkakkkkkeltpeqvlevIkqgYetLslk 199
                 fL +p s+ dLfYk+ve+gevl+kfrd ++l+               k+ +nsid+lisvs+h+++ll+ + ++kkkk+lt++qv++vIkqgYe+Ls++
  KHJ33956.1 506 FLHSPVSHYDLFYKVVEMGEVLVKFRDNFSLE---------------KRPKNSIDTLISVSAHYNHLLQGSGSEKKKKNLTSTQVASVIKQGYESLSIQ 589
                 *******************************9...............6789************************************************ PP

     DUF1741 200 alqegLdkwekyreedektflkkivrvavedar 232
                 a ++gL+++ekyre+d+k+flk++ r++v+d++
  KHJ33956.1 590 A-KDGLENCEKYREADKKAFLKQVSRCVVADVK 621
                 7.*****************************98 PP

>> TipAS  TipAS antibiotic-recognition domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.4e-05      0.22      22      98 ..      57     134 ..      50     139 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.4e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXX CS
       TipAS  22 iaklskedweelkaelkelfaklaaalaagkdpdseeaqelaeehralieefwg.ecskeilaglgqmYvadprften 98 
                 i+ ls ed+  l++e+++lf+k  ++++agk p++  a e    ++a i + ++ ++s ++   l+ + + d+ ft++
  KHJ33956.1  57 IDALSPEDFLSLQTETQQLFNKAVKCIRAGKGPADLNALETCTALMAAIFRKKYtNPSSDVIDLLAGLDQVDKIFTDF 134
                 578999***********************************9999999998888679999999998888887777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (629 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       662  (0.0369234); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4364.95
//
Query:       KHJ33957.1  [L=802]
Description: putative transcription regulator bdf1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.4e-39  132.1   1.7    3.3e-18   65.5   0.5    2.6  2  Bromodomain     Bromodomain
    5.9e-11   42.4   0.7    2.2e-10   40.6   0.0    2.4  3  BET             Bromodomain extra-terminal - transcription re
  ------ inclusion threshold ------
       0.03   13.8   1.6        0.1   12.0   1.6    1.9  1  Methyltransf_4  Putative methyltransferase
       0.46   10.9   3.0        2.7    8.4   0.5    3.4  3  CM_2            Chorismate mutase type II
        1.9    8.6   4.4        3.6    7.7   2.5    2.3  2  Spore_III_AB    Stage III sporulation protein AB (spore_III_A


Domain annotation for each model (and alignments):
>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.5   0.5   9.2e-22   3.3e-18       3      81 ..     220     301 ..     218     304 .. 0.95
   2 !   65.2   0.0   1.2e-21   4.1e-18       1      81 [.     417     502 ..     417     505 .. 0.90

  Alignments for each domain:
  == domain 1  score: 65.5 bits;  conditional E-value: 9.2e-22
                  HHHHHBHTTTCGGGGCSTT...-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHH CS
  Bromodomain   3 kilsellehklaepFlepv...dpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviyel 81 
                  kil+++ ++++ + F++pv   +p+  ++y a+i++P+dLstI+kkl+++ Y+++ d++ad++l+++N++ +n  ++++ + 
   KHJ33957.1 220 KILRNISRTNAGKNFRQPVavlWPSIAENYAAKISNPMDLSTIEKKLKEEAYTTMNDLKADVHLIYNNSVIFNSAENQVSKF 301
                  8999**********************************************************************99988775 PP

  == domain 2  score: 65.2 bits;  conditional E-value: 1.2e-21
                  HHHHHHHBHTTT...CGGGGCSTT-GCC..STTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHH CS
  Bromodomain   1 lekilsellehk...laepFlepvdpee..fpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviyel 81 
                  ++++lsel +     +++pFl pvdp     p+y+a+ikkP+d+st+ +kl+++ Y +  +fe+d++++f N++k+n+eg+++ ++
   KHJ33957.1 417 CDEVLSELQKSRyssINHPFLVPVDPVAlgIPNYFAIIKKPMDISTVARKLRDGVYLNANEFEKDVRQIFINCYKFNPEGNPVRQM 502
                  789999999988888*********6665227**************************************************99775 PP

>> BET  Bromodomain extra-terminal - transcription regulation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       2.1   7.6e+03       4      33 ..     200     229 ..     199     235 .. 0.78
   2 ?   -4.0   0.0         5   1.8e+04      25      33 ..     589     597 ..     587     605 .. 0.71
   3 !   40.6   0.0   6.1e-14   2.2e-10       5      63 ..     643     702 ..     639     703 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.1
         BET   4 yeeKkeLseeInkLpgeklgrvveIIqere 33 
                 ++eK++  e I+    ++ +++++ I++++
  KHJ33957.1 200 FDEKTKQNETITAYQIKEITKILRNISRTN 229
                 689999899998888888888888887776 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 5
         BET  25 vveIIqere 33 
                  ve+Iq+r 
  KHJ33957.1 589 LVELIQKRV 597
                 689999998 PP

  == domain 3  score: 40.6 bits;  conditional E-value: 6.1e-14
         BET   5 eeKkeLseeInkLpgeklgrvveIIqerepelq.sdedEiElDidaldddtLreLekyvk 63 
                  eK+++s +++  p + + +vve+I++ +pel  ++++ +ElDid++++  L++++  ++
  KHJ33957.1 643 LEKETISAGLGLIPTQVMATVVEMIKTERPELAdAGDETMELDIDSISEGILWQIHAMIM 702
                 59*******************************9999******************98776 PP

>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.6   2.9e-05       0.1      90     148 ..     558     617 ..     556     640 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.9e-05
                     GGGSTT..SHHHHHHHHHHEEEEEEEEEEESHHHHHHHHHHHHHCSTTEEESSCCCSCCTC CS
  Methyltransf_4  90 hKrRll..qpellkelarvLkkgGvlelaTDveeyaeemlkvleeeplferlskeeeleee 148
                     +K Rll  q++l++ +  + k +G+l+++TD+ e+ ++ +k +ee+ + +  sk++  + +
      KHJ33957.1 558 QKERLLeeQSKLITLMGAKHKDEGLLQMQTDLVELIQKRVKAAEEHAKKKVNSKKKVTK-S 617
                     6888884456899*********************************6666555544333.2 PP

>> CM_2  Chorismate mutase type II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       2.9     1e+04      29      51 ..     205     227 ..     203     246 .. 0.69
   2 ?    0.1   0.0       0.3   1.1e+03      36      57 ..     346     369 ..     320     377 .. 0.75
   3 ?    8.4   0.5   0.00076       2.7      10      60 ..     588     641 ..     583     654 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.9
                 HHHCTSGSS-HHHHHHHHHHHHH CS
        CM_2  29 KkeeglpvydpeReaevlerlee 51 
                 K++e  + y+ +   ++l+++++
  KHJ33957.1 205 KQNETITAYQIKEITKILRNISR 227
                 55555567777777777777766 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.3
                 SS-HHHHHHHHHHHHHHH..S-HH CS
        CM_2  36 vydpeReaevlerleega..ldee 57 
                   +++Re +v+++ +++a  ld+ 
  KHJ33957.1 346 PKRTSRESQVIAQSTAQAfaLDPT 369
                 567889999999998866446665 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.00076
                 HHHHHHHHHHHHHHHHHHHHHHCTSGSS-HHHHHHHHHHHHH...HHS-HHHHH CS
        CM_2  10 eileLLaeRaelakevgeyKkeeglpvydpeReaevlerlee...galdeeaie 60 
                 +++eL+++R + a+e ++ K +++++v   +   + +++ +     a +++++ 
  KHJ33957.1 588 DLVELIQKRVKAAEEHAKKKVNSKKKVTKSAKKSAPIKKAAPakkAATKKKYLG 641
                 79******************8888899988888777777766442224455554 PP

>> Spore_III_AB  Stage III sporulation protein AB (spore_III_AB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.51   1.8e+03      45      81 ..     212     255 ..     207     284 .. 0.65
   2 ?    7.7   2.5     0.001       3.6      99     156 ..     559     617 ..     534     618 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.51
                   HH-SS-HHHHHHHHH.....HCS-TTHHHHHHHHHHHHH.S..T CS
  Spore_III_AB  45 rygatpLpealekla.....eksesplseffeevaerleek..e 81 
                   +y+ + ++++l++++     ++ ++p++ ++ ++ae+  +k  +
    KHJ33957.1 212 AYQIKEITKILRNISrtnagKNFRQPVAVLWPSIAENYAAKisN 255
                   57777888899999955555555558888888887775554333 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.001
                   GS---HHHHHHHHHHHHH.HT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXX CS
  Spore_III_AB  99 klaLkkedkeilkelges.lgysdregqlkalelaleeleeeieeareeakkkeklyrt 156
                   k  L +e+ +++  +g +   +  +++q   +el+++++++ +e a+++ ++k+k+ ++
    KHJ33957.1 559 KERLLEEQSKLITLMGAKhKDEGLLQMQTDLVELIQKRVKAAEEHAKKKVNSKKKVTKS 617
                   45555555555555554403455689*****************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (802 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1958  (0.109209); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.80u 0.27s 00:00:01.07 Elapsed: 00:00:00.46
# Mc/sec: 5219.69
//
Query:       KHJ33958.1  [L=248]
Description: putative iron sulfur assembly protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-17   64.2   0.0    1.9e-17   63.5   0.0    1.4  1  Fe-S_biosyn     Iron-sulphur cluster biosynthesis
  ------ inclusion threshold ------
      0.057   13.6   0.0       0.13   12.5   0.0    1.6  1  DUF3853         Protein of unknown function (DUF3853)
       0.07   12.8   0.0       0.11   12.2   0.0    1.2  1  Lipoprotein_16  Uncharacterized lipoprotein


Domain annotation for each model (and alignments):
>> Fe-S_biosyn  Iron-sulphur cluster biosynthesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.0   3.1e-21   1.9e-17       3     111 .]     145     244 ..     143     244 .. 0.97

  Alignments for each domain:
  == domain 1  score: 63.5 bits;  conditional E-value: 3.1e-21
                  EEE-HHHHHHHHHHHHCTTEC.EEEEEECCTSCCGGS.TT.EEEEEEEEESSTSTTTEEEEEETTEEEEEEGGGHHHS.TTEEEEEEEETTEEEEEEE CS
  Fe-S_biosyn   3 itlteaAaeklkkllaedkke.lrLdvddgggpyskggCsiggkyslvlvdeedeeydevlesnggkvyvksyslvfldeglvldfvedlgtlgLksd 99 
                  i+lt+ A+++l+kll++ + + + ++v++ g       Cs g  y+l++v+++    de++e++g+kv+++s++l  +  g ++d+ved+ + ++ ++
   KHJ33958.1 145 IKLTPGAVNHLRKLLGQPTPKlIKIGVRNRG-------CS-GLAYHLEYVNKA-GLLDEEVEQDGVKVIIDSKALFSI-IGSEMDWVEDKLQQKFVFK 232
                  99***************88888*********.......**.************.************************.9****************** PP

                  TCCEEEEEEEEE CS
  Fe-S_biosyn 100 ngilddnvglgk 111
                  n+++++++g+g+
   KHJ33958.1 233 NPNIKEQCGCGE 244
                  **********85 PP

>> DUF3853  Protein of unknown function (DUF3853)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.1e-05      0.13      64      94 ..     185     215 ..     171     217 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.1e-05
     DUF3853  64 rikksGkiDkaitqiGrkiivDadlaLelak 94 
                  + k G++D+ + q G k+i+D++  +++++
  KHJ33958.1 185 YVNKAGLLDEEVEQDGVKVIIDSKALFSIIG 215
                 57899******************99988876 PP

>> Lipoprotein_16  Uncharacterized lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   1.8e-05      0.11      20      93 ..      84     154 ..      69     158 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.8e-05
  Lipoprotein_16  20 skDsRsaqevakinegdgelallsasedvrlllqqalrqqlssqGfrignnannnleveveklladvkegtlry 93 
                       DsR +++v ++++   ++  l ++e++ + +++  +q l+++  +++++a+ +l+++ +k+ ++ + g + +
      KHJ33958.1  84 RNDSRPSTQVDQYDH---STGALRPEEQPSKYIKESEKQSLNTNNTSATPEAKPRLKLRARKAAIKLTPGAVNH 154
                     579999998888888...7777889***************************************9999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1883.22
//
Query:       KHJ33959.1  [L=200]
Description: hypothetical protein EV44_g3873 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.072   13.3   0.0       0.21   11.8   0.0    1.8  1  RNase_H   RNase H


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.2e-05      0.21       3      95 ..      28     131 ..      26     180 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.2e-05
                 SEEEEEEEEEECT.TTCEEEEE.EECTT..........EEEEEEEC.CCCHHHHHHHHHHHHHHH.TT.SC..........SEEEEEES-HHHHHHHHC CS
     RNase_H   3 avvvYtDGsclgn.pgeggaga.vlykeg........arnisaple.eaqtnnraELsAvieaLk.alksd..........ekvniytDSkYvvkgitq 79 
                 ++ v+tD s  +n   ++++g+ ++  ++        +   s + +  + +   aEL  +++     + ++            + + tDSk +++ + +
  KHJ33959.1  28 QLLVFTDSSFANNmDTSSQIGFvIVLVDKnkkanlihW--SSIKCKrITRSVLAAELFGMVHGFDiGVAIKstldmilsttVPLILCTDSKSLYECLVK 124
                 789********99666669**96444444344433221..11222223466777899988886654332222344556533444588999888886665 PP

                 CCHHHHHTTSSSETTS CS
     RNase_H  80 wvhrwkknawkttseq 95 
                            tt+e+
  KHJ33959.1 125 LG---------TTQEK 131
                 33.........33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       621  (0.0346366); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.74
# Mc/sec: 817.46
//
Query:       KHJ33960.1  [L=505]
Description: hypothetical protein EV44_g1722 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.2e-11   42.5   0.0    1.1e-10   41.4   0.0    1.5  1  RVT_1           Reverse transcriptase (RNA-dependent DNA poly
    4.7e-08   33.0   0.0    1.1e-07   31.8   0.0    1.6  1  Integrase_H2C2  Integrase zinc binding domain


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.0   1.3e-14   1.1e-10     123     219 ..      33     119 ..      10     126 .. 0.84

  Alignments for each domain:
  == domain 1  score: 41.4 bits;  conditional E-value: 1.3e-14
                 .TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHHHHHHHHHHHHHHHHTT--BEGGG-EEE.....ESSEEETT CS
       RVT_1 123 skgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskeelqelleaveewlkesglkinpeKtklvlftvkseevkyLG 219
                  +g+   ++  +G+ +SP+  ++ ++ +lr  r+     +   Y+DDi+i+s++ ee+ e+l+av+++lk+ ++ ++++K+ l +      +v  LG
  KHJ33960.1  33 HRGQENFCRAVMGFRNSPAYVQRKIDTILRAERT-----FARSYIDDIVIFSRTFEEHLEHLKAVFQKLKSFKIVLSAKKCFLGY-----PSVGLLG 119
                 356677778889*******************999.....89****************************************9984.....6666666 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.0   1.3e-11   1.1e-07       1      41 [.     213     253 ..     213     257 .. 0.91

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 1.3e-11
  Integrase_H2C2   1 vpkslrkeilkeaHdsagHlGiektlerlrrryyWpgmrkd 41 
                     +pk++  e++++aHd++gHlG+++t erl++++y+  + k+
      KHJ33960.1 213 IPKNMEGEVFSNAHDQLGHLGYDRTQERLSSNFYIFDIGKK 253
                     79********************************9887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3418.42
//
Query:       KHJ33961.1  [L=278]
Description: putative mfs maltose permease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-27   93.9  11.3    1.2e-26   93.7  11.3    1.1  1  Sugar_tr    Sugar (and other) transporter
    2.3e-17   63.0  24.4    8.1e-10   38.1   7.1    1.9  2  MFS_1       Major Facilitator Superfamily
      0.005   15.7   1.0     0.0058   15.5   1.0    1.2  1  MFS_1_like  MFS_1 like family


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.7  11.3     2e-30   1.2e-26       4     196 ..      89     278 .]      86     278 .] 0.94

  Alignments for each domain:
  == domain 1  score: 93.7 bits;  conditional E-value: 2e-30
                 HHHHHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS- CS
    Sugar_tr   4 vaalggllfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsv 102
                 + +l  +++gY   +++ f+++++f  ++g+   ++++e  ++++  +    l+G+i+G  ++ +++dr+G++k+++i+ + +v+ + ++++++   s+
  KHJ33961.1  89 LLSLVVIMEGYANLLLAQFYAMPAFCQRYGVIGPHGTYEIPTLWQAGLSIGCLAGEIAGLCTSAIAVDRLGYRKTMIISLLALVAFINIIFFSQ---SL 184
                 5667779*****************************99988888877777799*****************************************...9* PP

                 TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHH.HTSS-TTHHHHHHHCCHHHHHHHHHHGGGS---HH CS
    Sugar_tr 103 evlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglgl.nktsnadgwrillglqlvpallllilllflPESPr 196
                  vl++g +l+G+++ ++++l+ +y+s ++p klR +l+++++l++ +G+l+ +++   l  ++++ + +ri l+lq++ +l ++i+++f+PESP+
  KHJ33961.1 185 VVLLIGEILCGVSLSVFQTLSCTYASDVCPIKLRPFLTTYTNLCWLIGQLLNSGVLRMLvGRSDQ-WSYRIALALQWAYPLPVAIAIFFAPESPW 278
                 *******************************************************9999556555.****************************7 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   9.3   1.4e-13   8.4e-10     201     351 ..      78     235 ..      50     237 .. 0.72
   2 !   38.1   7.1   1.4e-13   8.1e-10      42     150 ..     141     252 ..     133     277 .. 0.80

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 1.4e-13
       MFS_1 201 kallkdpvlwillialllfffgfsg.....lltllplylqevlgls.........glllaglllallalvgailallagrls.drlgrrrrlllallll 284
                 k l+++   w++l++l++++   ++      ++ +p +  +++g           +l++ag  l++++l+g i++l++++++ drlg r++++++ll+l
  KHJ33961.1  78 K-LWRPASYWSILLSLVVIM-EGYAnlllaQFYAMPAF-CQRYGVIgphgtyeipTLWQAG--LSIGCLAGEIAGLCTSAIAvDRLGYRKTMIISLLAL 171
                 2.333444453333333331.22223445466666666.777777677777888899****..************************977777777666 PP

       MFS_1 285 llaalglallavtssavllllvlvliGfglgfvfpsllalasdlappeeagtasglfntagslggal 351
                 +++  ++++       v+ll++ +l+G+ l+++++++ ++asd++p + + +++ ++n+++ +g +l
  KHJ33961.1 172 VAFINIIFFSQSL---VVLLIGEILCGVSLSVFQTLSCTYASDVCPIKLRPFLTTYTNLCWLIGQLL 235
                 6666666666666...888889999************************************999876 PP

  == domain 2  score: 38.1 bits;  conditional E-value: 1.4e-13
       MFS_1  42 algaavaslplGrlsdrfGrrrvlllglllfalglllllfasslw.lllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpl 139
                  +g +++    +  +dr+G r++++++ll++++++ +++f s++  +ll++ +l+G+  +++ +++ ++++d+ p + r++ + + ++++ +G +l  +
  KHJ33961.1 141 LAGEIAGLCTSAIAVDRLGYRKTMIISLLALVAFINIIFF-SQSLvVLLIGEILCGVSLSVFQTLSCTYASDVCPIKLRPFLTTYTNLCWLIGQLLNSG 238
                 45667777778899********************888889.77777**************************************************999 PP

       MFS_1 140 lggllasslg...W 150
                 +  +l+       +
  KHJ33961.1 239 VLRMLVGRSDqwsY 252
                 99988844334332 PP

>> MFS_1_like  MFS_1 like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   1.0   9.6e-07    0.0058     261     349 ..     131     220 ..      29     238 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 9.6e-07
  MFS_1_like 261 llGslvalgvva.eiplfffaeklleklGhvklliiallayilrfllyaiienawlvlpievLhgisfgllwaaaveyvskiapksleat 349
                 l+ + + +g++a ei  + ++   +++lG +k +ii+lla ++   ++ + ++++++l+ e+L g+s+ ++     +y+s++ p +l+ +
  KHJ33961.1 131 LWQAGLSIGCLAgEIAGLCTSAIAVDRLGYRKTMIISLLALVAFINIIFFSQSLVVLLIGEILCGVSLSVFQTLSCTYASDVCPIKLRPF 220
                 55556666765439999999999***************99987666666669*******************************9888755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2016.52
//
Query:       KHJ33962.1  [L=462]
Description: putative d-3-phosphoglycerate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-49  167.0   0.0    4.1e-49  166.3   0.0    1.4  1  2-Hacid_dh_C   D-isomer specific 2-hydroxyacid dehydrogenase,
    6.3e-36  123.0   0.0      1e-35  122.3   0.0    1.3  1  2-Hacid_dh     D-isomer specific 2-hydroxyacid dehydrogenase,
     0.0047   17.1   0.1      0.011   15.9   0.1    1.6  1  NAD_binding_2  NAD binding domain of 6-phosphogluconate dehyd
  ------ inclusion threshold ------
      0.029   14.4   0.4       0.12   12.4   0.1    2.0  2  AdoHcyase_NAD  S-adenosyl-L-homocysteine hydrolase, NAD bindi
      0.033   13.8   0.3      0.068   12.8   0.3    1.4  1  Amdase         Arylmalonate decarboxylase
      0.067   13.3   0.0       0.15   12.2   0.0    1.5  1  POR            Pyruvate ferredoxin/flavodoxin oxidoreductase
      0.068   13.1   0.0       0.14   12.1   0.0    1.5  1  HisG           ATP phosphoribosyltransferase
      0.075   12.8   0.2       0.25   11.1   0.2    2.0  1  ACT            ACT domain


Domain annotation for each model (and alignments):
>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.3   0.0   1.8e-52   4.1e-49       3     178 .]     161     343 ..     159     343 .. 0.92

  Alignments for each domain:
  == domain 1  score: 166.3 bits;  conditional E-value: 1.8e-52
                   HHHHHHTTHHHHHHHHHTTCCHTTCCGSBS-GTTSEEEEES-SHHHHHHHHHHHHTT-EEEEESSSHHHHHCHHHHTCEECSHHHHHHH-SEEEE-S CS
  2-Hacid_dh_C   3 lllallrrlaeadeevregewksekallgkelsgktvGiiGlGrIGqavakrlkafgmkviaydrskkkeeeeeelgvelvsleellaesDivslhl 99 
                    ++ l+r+l + ++e+++g w ++ + +  e++gkt+GiiG+G+IG+++  +++a+gmkvi++d  +      ++   ++ sle+ll+++D+v++h+
    KHJ33962.1 161 EIICLARQLGDRSNELHAGIW-NKVSAHCWEIRGKTLGIIGYGHIGSQLSVLAEAMGMKVIYHDILNLMGLGSAK---QVRSLEQLLNDADFVTCHV 253
                   58899****************.999999**************************************886653333...678**************** PP

                   --STTTTTSBSHHHHHCSTTTEEEEESS-GGGB-HHHHHHHHHTTSCCEEEES--SSSSSGTC...........HHHHHSTTEEE-SS-T CS
  2-Hacid_dh_C 100 pltpetrhlinaeelakmkkgailiNtaRGglvdeeaLleaLksgkiagaalDvfeeeplped...........spllelpnviltPHia 178
                   p  pet ++i+a +l++mk g++liN++RG++vd  aL+ a+k+gkiagaalDv+  ep ++            ++l++l+n+iltPHi+
    KHJ33962.1 254 PELPETVNMIGAPQLEQMKFGSYLINASRGTVVDIPALISAMKKGKIAGAALDVYPIEPGSNGkhfnnnlsdwiEELRTLQNIILTPHIG 343
                   **********************************************************8887766666666666688***********98 PP

>> 2-Hacid_dh  D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.3   0.0   4.5e-39     1e-35       1     134 []      56     375 ..      56     375 .. 0.99

  Alignments for each domain:
  == domain 1  score: 122.3 bits;  conditional E-value: 4.5e-39
                 EEEEST.CHHHHHHHHHTTEEEEEES.CSSHHHCHHHHTTESEEEE-TTS-BSHHHHHHHTT--EEEESSSSCTTB-HHHHHHTT-EEEE-TTTTHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  2-Hacid_dh   1 vlileplreeelellkeegvevevkd.ellteellekakdadalivrsntkvtaevlealpkLkviaragvGvDnvDldaakerGilVtnvpgystesv 98 
                 vl+le++++++l+ l+ +g++ve  + +l +eel+ek++d++++ +rs+t+++++vl+++++L v++++++G+++vDl++a+++Gi+V+n p ++++sv
  KHJ33962.1  56 VLLLENVNQSGLAVLESQGYQVEALKsSLKEEELIEKIRDIHVIGIRSKTQLNQRVLSKAKNLIVVGCFCIGTNQVDLNYAAKKGIAVFNSPFANSRSV 154
                 799**************999***999788899******************************************************************* PP

                 HHHH............................................................................................... CS
                 xxxx............................................................................................... RF
  2-Hacid_dh  99 AElt............................................................................................... 102
                 AEl+                                                                                               
  KHJ33962.1 155 AELVvceiiclarqlgdrsnelhagiwnkvsahcweirgktlgiigyghigsqlsvlaeamgmkviyhdilnlmglgsakqvrsleqllndadfvtchv 253
                 *************************************************************************************************** PP

                 ..........................................................................................T-BHHHHHH CS
                 ..........................................................................................xxxxxxxxx RF
  2-Hacid_dh 103 ..........................................................................................aaTeeaqen 111
                                                                                                           ++Teeaq +
  KHJ33962.1 254 pelpetvnmigapqleqmkfgsylinasrgtvvdipalisamkkgkiagaaldvypiepgsngkhfnnnlsdwieelrtlqniiltphigGSTEEAQYA 352
                 *************************************************************************************************** PP

                 HHHHHHHHHHHHHTTCCGTTBCS CS
                 xxxxxxxxxxxxxxxxxxxxxxx RF
  2-Hacid_dh 112 iaeeaaenlvaflkgespanavn 134
                 i+ e+ e++v++++ + +   vn
  KHJ33962.1 353 IGIEVSEAIVRYVNSGVTLGSVN 375
                 **************999988887 PP

>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   5.1e-06     0.011       2     100 ..     196     291 ..     195     306 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 5.1e-06
                    EEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT.EEE-SSHHHHHHHCSEEEE-SSSHHHHHHHHHS.HCCC--TT-EEEE-S---HH CS
  NAD_binding_2   2 igfiGlGvMGsnmalnllkagykvavynrtkekveelvaeg.akaaesieelvasldvvitmvkagkavdevieg.llealkkgdilidgstsspe 95 
                    +g+iG G +Gs++    ++ g+kv+ ++       +l+  g ak + s+e+l++++d+v + v++ +++ ++i    le++k g++li+ s   + 
     KHJ33962.1 196 LGIIGYGHIGSQLSVLAEAMGMKVIYHDIL-----NLMGLGsAKQVRSLEQLLNDADFVTCHVPELPETVNMIGApQLEQMKFGSYLINASRGTVV 286
                    79*************************965.....677776699**********************99999999999999********99876666 PP

                    HHHHH CS
  NAD_binding_2  96 dtrel 100
                    d   l
     KHJ33962.1 287 DIPAL 291
                    65555 PP

>> AdoHcyase_NAD  S-adenosyl-L-homocysteine hydrolase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.65   1.5e+03      77     120 ..      92     135 ..      65     146 .. 0.58
   2 ?   12.4   0.1   5.4e-05      0.12      21     106 ..     191     277 ..     183     311 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.65
                    TT-SEEEE-SSSSSSB-HHHHCCS-TTEEEEE-SSTTTTBTHHH CS
  AdoHcyase_NAD  77 kkadivvtttGnkdiitlehlkkmkddaivcniGhfdseidvaa 120
                    k  di v    +k  +++  l+k k+  +v+     ++++d++ 
     KHJ33962.1  92 KIRDIHVIGIRSKTQLNQRVLSKAKNLIVVGCFCIGTNQVDLNY 135
                    22456666666666777777777777777776666666666655 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 5.4e-05
                    -TTSEEEEE--SHHHHHHHHHHHHCT-EEEEE-S-HHHHHHHHCTT-EE--HHHCTTT-SEEEE-S.....SSSSSB-HHHHCCS-TTEEE CS
  AdoHcyase_NAD  21 laGkvavvaGyGdvGkGcaaslkglGarvivtevdPicalqaameGfevvtleevvkkadivvttt.....Gnkdiitlehlkkmkddaiv 106
                    + Gk+  ++GyG +G   +   +++G +vi  ++  +  l +a    +v+ le+++++ad+v t+       + ++i + +l++mk  + +
     KHJ33962.1 191 IRGKTLGIIGYGHIGSQLSVLAEAMGMKVIYHDILNLMGLGSA---KQVRSLEQLLNDADFV-TCHvpelpETVNMIGAPQLEQMKFGSYL 277
                    78****************************9998877777765...689**********965.5531222235567777777777765555 PP

>> Amdase  Arylmalonate decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3     3e-05     0.068     108     204 ..      59     158 ..      33     165 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3e-05
      Amdase 108 idevnerLvayLeesglevaales.Ld....iedveavakvtaeelvelgkkavaaapeadallisCGGLrtldvvreledelglpvvssalAGlwdav 201
                  ++vn+   a Le++g++v+al+s L+    ie++ +++ +  ++ ++l ++++++a+  + +++ C  + t +v  +  ++ g++v  s+ A  + ++
  KHJ33962.1  59 LENVNQSGLAVLESQGYQVEALKSsLKeeelIEKIRDIHVIGIRSKTQLNQRVLSKAK--NLIVVGCFCIGTNQVDLNYAAKKGIAVFNSPFANSRSVA 155
                 579*******************863544444777888888888888888888886555..568999**************************9988877 PP

      Amdase 202 rla 204
                  l+
  KHJ33962.1 156 ELV 158
                 665 PP

>> POR  Pyruvate ferredoxin/flavodoxin oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   6.5e-05      0.15      65     151 ..      50     137 ..      41     158 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 6.5e-05
                 SHHHHH.HHGGGEEEEEEEEEECTCGTT-CCHHHCTS-HHHHHHHT-EEEEE-HHHHHHHCCC.CCHHHHHHHHHHHHHHT.S-HHHHH CS
         POR  65 daetls.ehldglkpggiiiynseelkpdelkkakeeerelkerlgvrvygvdatkiakeiggneraaNtvmlGalaallg.lpleale 151
                 da++++   l+++++ g++++ s   + + lk ++ ee   ++ ++++v+g+  +  + +    ++a+N +++G+++  ++ ++l++  
  KHJ33962.1  50 DAQEIKvLLLENVNQSGLAVLESQGYQVEALKSSLKEEELIEKIRDIHVIGIRSKTQLNQRVL-SKAKNLIVVGCFCIGTNqVDLNYAA 137
                 6666666678999**********9999999999887765444445*********999999899.************9999999995543 PP

>> HisG  ATP phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   6.4e-05      0.14      75     133 ..     320     385 ..     316     407 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 6.4e-05
                 HHHHHHHHHHTT-EEEEE...E-SS-CTHH...HHTTS-SEEEEEESSSHHHHHTTEEEEE.EEEE CS
        HisG  75 pnlakkyfeekglkveii...klsGsvEaa...palglaDaIvDlvetGeTLrangLkaie.tile 133
                  n +++++ee++   +ii   ++ Gs+E a   + +++++aIv  v++G TL + +L +i+  il+
  KHJ33962.1 320 NNNLSDWIEELRTLQNIIltpHIGGSTEEAqyaIGIEVSEAIVRYVNSGVTLGSVNLPEISfRILQ 385
                 555566666664444443223689***95443388899*******************999646665 PP

>> ACT  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   0.00011      0.25       4      26 ..     394     416 ..     391     453 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00011
                 EEEEESSTTHHHHHHHHHHHTTS CS
         ACT   4 rvgvpDrPGlLarvfgaladrgi 26 
                 +   +++PG+L +v g+++++++
  KHJ33962.1 394 IYIHKNVPGVLRKVNGIIGNHNV 416
                 55678*****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (462 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.55u 0.30s 00:00:00.85 Elapsed: 00:00:00.47
# Mc/sec: 2964.38
//
Query:       KHJ33963.1  [L=1577]
Description: putative myosin class v myosin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   3.4e-255  848.4   0.1   5.9e-255  847.7   0.1    1.4  1  Myosin_head      Myosin head (motor domain)
    3.8e-27   94.6   2.7    2.5e-26   92.0   2.7    2.6  1  DIL              DIL domain
    2.5e-13   48.5  42.4    0.00016   21.2   2.1    7.3  7  IQ               IQ calmodulin-binding motif
     0.0007   19.5   7.1     0.0007   19.5   7.1    2.8  2  KASH_CCD         Coiled-coil region of CCDC155 or KASH
     0.0021   17.9   0.3     0.0021   17.9   0.3    1.9  2  Myosin_N         Myosin N-terminal SH3-like domain
     0.0034   17.8   0.5      0.021   15.2   0.0    2.6  2  AAA_16           AAA ATPase domain
  ------ inclusion threshold ------
      0.057   12.3  21.2        0.1   11.5  21.2    1.3  1  CALCOCO1         Calcium binding and coiled-coil domain (CALC
       0.13   12.5   0.1       0.13   12.5   0.1    2.5  2  AAA_22           AAA domain
        2.2    7.3  16.3        4.9    6.2  16.3    1.6  1  Atg14            Vacuolar sorting 38 and autophagy-related su
        4.3    6.6  29.3        8.4    5.7   8.0    2.7  2  GAS              Growth-arrest specific micro-tubule binding
        4.7    7.3  29.6          8    6.6  21.6    2.9  2  DHR10            Designed helical repeat protein 10 domain
        5.1    5.5   7.9        9.7    4.6   7.9    1.4  1  FUSC             Fusaric acid resistance protein family


Domain annotation for each model (and alignments):
>> Myosin_head  Myosin head (motor domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  847.7   0.1    4e-258  5.9e-255       2     677 .]      77     770 ..      76     770 .. 0.93

  Alignments for each domain:
  == domain 1  score: 847.7 bits;  conditional E-value: 4e-258
                  SBGCGSSS-SHHHHHHHHHHHHHTT--EEEETTEEEEE--SS--S.TSSHHHHHHHTTS-GGGSSSSHHHHHHHHHHHHHHHTSEEEEEEESSTTSSH CS
  Myosin_head   2 edlveLsllneasvlenlkkRykkdliYtysglvlvavnPykklk.iysedvikaykgkkreelpPHifaiadeayrslledkenqsilisGEsGAGK 98 
                  +dl++Ls+lne++vl++++ Ry +++iYtysg+vl+a+nP+ +l+ iy   +++ y gk+r    PH+faia+ea+ ++l++ +nq++++sGEsGAGK
   KHJ33963.1  77 DDLTNLSHLNEPAVLQAIRLRYLQKEIYTYSGIVLIATNPFARLDsIYVPGMVQVYAGKQRAVQAPHLFAIAEEAFADMLRSGKNQTVVVSGESGAGK 174
                  8************************************************************************************************* PP

                  HHHHHHHHHHHHHHSSSSSC........TCTTHHHHHHHHHHHHHHHHHEEEESSETTEESSEEEEEEEEETTSSEEEEEEEEECE-GGGGT---TT- CS
  Myosin_head  99 teatKkvlqylasvaeskek........veeeeleekilqsnPilEafGnAktvrndnssRFGKfieiefdakgkiagakietYLLEksRvvkqakeE 188
                  t+++K++++y+a+ +  +           +++e ee+il++nPi+E+fGnAkt+rndnssRFGK+iei fd++++i+ga+i+tYLLE+sR+v+q  +E
   KHJ33963.1 175 TVSAKYIMRYFATREPPDGPgtrtkrgsDSMSETEEQILATNPIMESFGNAKTTRNDNSSRFGKYIEIMFDNQTTIIGARIRTYLLERSRLVFQPFKE 272
                  ************98876655777888888999****************************************************************** PP

                  -SBHHHHHHHHCSTHHHHHHTT--TCCGSTTTTTTSSSSBTTS-HHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHCTSSEEEECTTSSEEESSH CS
  Myosin_head 189 RnyHiFYqllagaseeekkelkledvkdyaylsqsgeltvdgiddseefketkkaldilglseeeqkeifrivaailhlGniefkkeakdeqavlede 286
                  RnyH+FYq+lagase+e++e++l  v+d++yl+q+++ ++dg+dd++ef+++kk+l ++g+++++ +eif+i+aa+lhlGn++++ +++++ + +++e
   KHJ33963.1 273 RNYHVFYQMLAGASESERQEWSLLPVDDFNYLNQGSSPSIDGVDDKAEFEALKKSLATIGVKQDQLTEIFKILAALLHLGNVKITATRNES-SLTPNE 369
                  **************************************************************************************99885.899999 PP

                  HHHHHHHHHHTS-HHHHHHHHHSEEEEETTEEEEEE-BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS..-S-SEEEEEEEEE-B---SSB-H CS
  Myosin_head 287 eklekaaellgvdaeelekalvkrriktgkevvskalnveqaevardalakaiyerlFdwlverinkslekkk..eekksfiGvLDiaGFEifeknsF 382
                   +le+aa++lg+d  e++++ vk+++ t+ ++v+++l+ +qa v rd++ak++y+ lFdwlve+in +l +++  ++ ksfiGvLDi+GFE+f knsF
   KHJ33963.1 370 PSLEIAASILGIDPVEFARWTVKKQLITRGDKVVSSLSQQQAIVVRDSVAKFVYSSLFDWLVENINYALAAEEvlSRVKSFIGVLDIYGFEHFAKNSF 467
                  99********************************************************************999778999******************* PP

                  HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTSSGCGS-GGGCCHHHHHHHHSSSTSHHHHHHHHHTSTTS-HHHHHHHHHHHH..TTSTTEEETTST CS
  Myosin_head 383 EqlcinyvnEkLqqlFnelvlklEqeeYvrEgiewkfidfgldnqaiidLiekkplGilslLdeecllpkatdetfleklvkaf..skhakfeksrlk 478
                  Eq+ciny+nEkLqq Fn +v+klEqeeYv+E+i+w+fidf  dnq++idLie k lGilslLdee++l +++d++f++kl +++  +kh+ ++k+r  
   KHJ33963.1 468 EQFCINYANEKLQQEFNAHVFKLEQEEYVKEQIDWTFIDF-SDNQPCIDLIEGK-LGILSLLDEESRLINGNDKNFVKKLDENYggDKHKFYRKPR-- 561
                  ****************************************.7***********6.*****************************977777788887.. PP

                  TTTTEEEEEETTCEEEEE-TTHHHHHH----HHHHHHHHTSSSHHHHHHCCSHCH........B--.........CSSSECCCCCSBHHHHHHHHHHH CS
  Myosin_head 479 kgeakFiikHyAgkveYevegfleKnkDtlnedlvellksskkkllaelfkeeek........eakaeakksekkkkkkkkkkkfktvgskfkeslae 568
                   ge +F+++HyA +v+Ye +gfl+Kn+Dt+ ++++++lk+s++k+l ++++ ++         +++++a k +  ++     +++ t+g  fk+sl e
   KHJ33963.1 562 FGELSFTVCHYAIDVTYESDGFLDKNRDTVPDEHMAVLKASTNKFLGQVLEAASAvrekdsasATTSSAVKPAGGRRIGVAINRKPTLGGIFKSSLIE 659
                  6**************************************************9888666554332222333333344444566789************* PP

                  HHHHHCTSEEEEEEEE-SSSS--TT---HHHHHHHHHHTTHHHHHHHHHHSSSEEEEHHHHHHHHGGGSTTSS-SS..SSSHHHHHHHHHHHTTS-.G CS
  Myosin_head 569 LmktlestnphfvRCikpnekkkakkldeslvleqlrclGvlegirirraGfpnRitfeefvqrYkllakkelkkl.lkedakkaveailkeleld.k 664
                  Lm+t+++t++h++RCikpne+k+++ ++  +vl+qlr++Gvle++ri++aG+p+R+t+eef  rY++l++++ +++ ++e a+k   + l + +++  
   KHJ33963.1 660 LMHTINNTDVHYIRCIKPNERKESWVFEGPMVLSQLRACGVLETVRISCAGYPTRWTYEEFALRYYMLIHSSEWTSeIREMANKILVKALGTSNVKgL 757
                  ******************************************************************99887654332544444444444444444438 PP

                  CGEEECSSEEEET CS
  Myosin_head 665 eeykiGktKiFfr 677
                  ++y++G tKiFfr
   KHJ33963.1 758 DKYQLGLTKIFFR 770
                  9***********8 PP

>> DIL  DIL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.0   2.7   1.7e-29   2.5e-26       1     101 [.    1381    1479 ..    1381    1482 .. 0.94

  Alignments for each domain:
  == domain 1  score: 92.0 bits;  conditional E-value: 1.7e-29
                  HHHHHHHHHHHHHHHHHHHHHS-SB-HHHHHHHHHHHHHHHHCCTS-.....-GGGGHHHHHHHHHHHC-S--HHHHHHHC.TT-TSS-HHHHHHHH CS
         DIL    1 QlfsqlfyfinaelfNrlllrkklcsrskGlqlrrnlslledWaeeqgleeaaekhlapliqaaqllqlpkssledlesilrstcpaLnsaQlkrll 97  
                  Q++++l++++++++fN+ll+r++++s+++Glq+++n++++e+W++++++  + + +l++l+qa++llql+k++l+d+e i+ ++c+ L++ Q+++ll
  KHJ33963.1 1381 QTITELLRLVGVTAFNDLLMRRNFLSWKRGLQINYNITRIEEWCKSHDMP-EGTLQLEHLMQATKLLQLKKATLNDIEIIQ-DICWMLSPNQIQKLL 1475
                  8999********************************************96.5699*****************888886666.*************** PP

                  TTB- CS
         DIL   98 enYr 101 
                  ++Y 
  KHJ33963.1 1476 NQYL 1479
                  ***6 PP

>> IQ  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       1.2   1.8e+03       5      15 ..     249     259 ..     247     262 .. 0.87
   2 ?    4.4   0.1     0.026        39       2      20 ..     787     805 ..     786     806 .. 0.84
   3 !    6.8   0.2    0.0043       6.5       1      19 [.     809     827 ..     809     829 .. 0.89
   4 !   21.2   2.1   1.1e-07   0.00016       2      20 ..     835     853 ..     834     854 .. 0.94
   5 !   10.3   0.8   0.00033      0.49       3      19 ..     859     875 ..     857     877 .. 0.87
   6 !   11.9   1.4    0.0001      0.15       2      16 ..     883     897 ..     882     902 .. 0.85
   7 !   17.5   4.1   1.6e-06    0.0024       1      21 []     905     925 ..     905     925 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.2
                 HHHHHHHHHHH CS
          IQ   5 ikIQaawRGyl 15 
                 ++I a++R yl
  KHJ33963.1 249 TIIGARIRTYL 259
                 8999******9 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.026
                 HHHHHHHHHHHHHHHHHHH CS
          IQ   2 kaaikIQaawRGylaRkry 20 
                 ++ai+IQ+  +G   R ry
  KHJ33963.1 787 DCAIIIQKNLKGRYYRNRY 805
                 69*******9998777777 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0043
                 HHHHHHHHHHHHHHHHHHH CS
          IQ   1 rkaaikIQaawRGylaRkr 19 
                 r++++k+Q+  R++ aR +
  KHJ33963.1 809 RASILKFQSSSRAFFARNN 827
                 679**************87 PP

  == domain 4  score: 21.2 bits;  conditional E-value: 1.1e-07
                 HHHHHHHHHHHHHHHHHHH CS
          IQ   2 kaaikIQaawRGylaRkry 20 
                 +aa++IQ+ wRG++++k++
  KHJ33963.1 835 RAATIIQRIWRGHKQKKYF 853
                 8****************98 PP

  == domain 5  score: 10.3 bits;  conditional E-value: 0.00033
                 HHHHHHHHHHHHHHHHH CS
          IQ   3 aaikIQaawRGylaRkr 19 
                  +i+ Qa++RGyl R++
  KHJ33963.1 859 NVILAQAVFRGYLRRRQ 875
                 68999**********98 PP

  == domain 6  score: 11.9 bits;  conditional E-value: 0.0001
                 HHHHHHHHHHHHHHH CS
          IQ   2 kaaikIQaawRGyla 16 
                  aai+IQ+awR+ ++
  KHJ33963.1 883 NAAIVIQRAWRARKQ 897
                 69*********9887 PP

  == domain 7  score: 17.5 bits;  conditional E-value: 1.6e-06
                 HHHHHHHHHHHHHHHHHHHHH CS
          IQ   1 rkaaikIQaawRGylaRkryk 21 
                 r+ +++IQ+ wRG +aRk+yk
  KHJ33963.1 905 RRKVVIIQSLWRGRQARKAYK 925
                 6889****************8 PP

>> KASH_CCD  Coiled-coil region of CCDC155 or KASH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   7.1   4.7e-07    0.0007      56     132 ..     918     994 ..     911    1003 .. 0.93
   2 ?    2.2  15.3     0.096   1.4e+02      41     111 ..    1004    1074 ..     999    1079 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 4.7e-07
    KASH_CCD  56 QqalqkaklleeEleelkalvkeleEkrarlkaqnkqlekenqsLiakiesLqeenikllaekdelkkklkeLlkek 132
                  qa + +k++ eE  +lk++  +le k  +l +    +++en+ L++++e+ +++++  +  +++l++++keL +e 
  KHJ33963.1 918 RQARKAYKIIREEARDLKQISYKLENKVVELTQSVGSMKRENKALVTQVENYENQIKSWKLRHNALETRTKELQSEA 994
                 688999*******************************************************************8765 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.096
    KASH_CCD   41 LteeieeLkkklkstQqalqkaklleeEleelkalvkeleEkrarlkaqnkqlekenqsLiakiesLqeen 111 
                  L+   e++kk   s   ++ + k l+eE  el++l+k+++ + ++ +  ++  e e+  L++++++Lq+++
  KHJ33963.1 1004 LAVMEEDMKKLQISFDESAANIKRLQEEERELRELLKKSNAQLEETQRMSSAHETEKLTLRQQLAELQDQL 1074
                  555556777766778999**************************************************976 PP

>> Myosin_N  Myosin N-terminal SH3-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.3   1.4e-06    0.0021       2      38 ..       9      49 ..       8      50 .. 0.91
   2 ?   -3.4   0.2       6.2   9.2e+03      23      39 ..     161     177 ..     158     178 .. 0.73

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 1.4e-06
                EEEEETTSTTS-EEEEEE..EEESSE..EEEEETTSEEEEE CS
    Myosin_N  2 klVWVpDpkegyvkGeIk..eeeGdk..vtVetedGktvtV 38
                ++ W pDp+ g+v+ e++   +eGdk  + + +e+G t+t+
  KHJ33963.1  9 TKAWQPDPTTGWVASEVTsrRIEGDKvfLDFTLENGATKTI 49
                788***************999*****8889999***99996 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 6.2
                 SSEEEEEETTSEEEEEE CS
    Myosin_N  23 GdkvtVetedGktvtVk 39 
                 + +v+V  e+G  +tV+
  KHJ33963.1 161 NQTVVVSGESGAGKTVS 177
                 45677777999999986 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.4e-05     0.021      17      51 ..     154     188 ..     146     322 .. 0.75
   2 ?   -2.2   0.9       3.1   4.6e+03      91     137 ..    1032    1083 ..     985    1085 .. 0.60

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.4e-05
      AAA_16  17 ervrsgrpelvllsGesGvGKsslvrellralekd 51 
                 +++rsg  + v++sGesG GK+  ++ ++r++ ++
  KHJ33963.1 154 DMLRSGKNQTVVVSGESGAGKTVSAKYIMRYFATR 188
                 466788889******************99988777 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3.1
      AAA_16   91 saeleawrekleealaavpelagaea......srllellkrllallsrderpl 137 
                  ++el++  +k  ++l++++ +++a++      ++ l++l++ l+l++r + pl
  KHJ33963.1 1032 ERELRELLKKSNAQLEETQRMSSAHEtekltlRQQLAELQDQLELARR-GAPL 1083
                  334444444444444455555555555665565555556666666666.4445 PP

>> CALCOCO1  Calcium binding and coiled-coil domain (CALCOCO1) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5  21.2   6.8e-05       0.1      51     201 ..     922    1074 ..     913    1085 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 6.8e-05
    CALCOCO1   51 eaanrqrekekeeykrdreeldrerkelesrveelkeelkesrekveeleekqkelerlseelaeeksall...eakeesearirELEeDiktltqr 144 
                   a +  re+  ++ k+ + +l++++ el ++v  +k+e k +  +ve+ e++ k  +  +++l  + + l    ++++ s ar+  +EeD+k l   
  KHJ33963.1  922 KAYKIIREEA-RDLKQISYKLENKVVELTQSVGSMKRENKALVTQVENYENQIKSWKLRHNALETRTKELQseaNQAGISAARLAVMEEDMKKLQIS 1017
                  4555555554.78999999************************************999999997766655411134445899*************** PP

    CALCOCO1  145 alekEteLeRlkerakkalaqrkeeeaerkqlqakleqseeelrslskelqelrnsl 201 
                    e  ++++Rl+e+ + + +++k  +a+ ++ q   ++ e+e   l ++l el+++l
  KHJ33963.1 1018 FDESAANIKRLQEEERELRELLKKSNAQLEETQRMSSAHETEKLTLRQQLAELQDQL 1074
                  ******************************999887888899999999999988776 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   8.9e-05      0.13       6      37 ..     162     193 ..     157     342 .. 0.73
   2 ?   -2.5   0.7       3.9   5.8e+03      72     102 ..    1032    1060 ..     961    1084 .. 0.49

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 8.9e-05
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeakaee 37 
                 + +vv GesG+GKT++++ +++ +  ++ ++ 
  KHJ33963.1 162 QTVVVSGESGAGKTVSAKYIMRYFATREPPDG 193
                 6689**************99988765554444 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 3.9
      AAA_22   72 rlsseellealeqalraravielliiDEaqh 102 
                  + +++ell++ + +l+++++  +    E ++
  KHJ33963.1 1032 ERELRELLKKSNAQLEETQR--MSSAHETEK 1060
                  33333333333333333333..333333333 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2  16.3    0.0032       4.9      23     133 ..     944    1054 ..     926    1092 .. 0.89

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0032
       Atg14   23 rlyelrerlaklksekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklkkRrsdle 119 
                  ++ el + + ++k e+++l +++e ++++ ++ + + ++++++++ l++  ++  ++ +rl+ +++++++l+ + +e  +++++l+++  + r+ l+
  KHJ33963.1  944 KVVELTQSVGSMKRENKALVTQVENYENQIKSWKLRHNALETRTKELQSEANQAGISAARLAVMEEDMKKLQISFDESAANIKRLQEEERELRELLK 1040
                  6778999999*********************9********************************************************999999999 PP

       Atg14  120 slqneleerrkkqi 133 
                  + + +lee ++ + 
  KHJ33963.1 1041 KSNAQLEETQRMSS 1054
                  99999999887654 PP

>> GAS  Growth-arrest specific micro-tubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   8.0    0.0056       8.4      44     124 ..     919     996 ..     915     998 .. 0.80
   2 ?    3.8  26.5     0.021        32      31     159 ..     941    1075 ..     940    1079 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0056
         GAS  44 rnekelseisqenkrlkepLkkaeeeveeLrkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvekerde 124
                 +++k  + i +e ++lk+   k+e++v eL + +   +++ ++l    +++++ e+++k+ k+ h+ le r +++++e ++
  KHJ33963.1 919 QARKAYKIIREEARDLKQISYKLENKVVELTQSVGSMKRENKAL---VTQVENYENQIKSWKLRHNALETRTKELQSEANQ 996
                 67788888889999999999999999999998888777766655...5678888899999999999999999999998775 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.021
         GAS   31 lKeeieelkkkeernekelseisqenkrlkepLkkaeeeveeLrkqlknyekdkqslknlkarlkelekelkdlkwehevleqrfekvek...erde 124 
                  l +++ el +   ++++e +++ ++ ++++ ++k  +   + L+ + k+ +++ ++   + arl ++e+ +k+l+ + +     ++++++   e  e
  KHJ33963.1  941 LENKVVELTQSVGSMKRENKALVTQVENYENQIKSWKLRHNALETRTKELQSEANQAGISAARLAVMEEDMKKLQISFDESAANIKRLQEeerELRE 1037
                  778888999999999999999999999999999999999999*************************************999999999873335567 PP

         GAS  125 lykkfeaaiqevqqkt...glknllLekklkalqeelE 159 
                  l kk +a ++e+q  +   + ++l L ++l++lq++lE
  KHJ33963.1 1038 LLKKSNAQLEETQRMSsahETEKLTLRQQLAELQDQLE 1075
                  778888888888776511167899*************9 PP

>> DHR10  Designed helical repeat protein 10 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   5.0      0.03        44      55     110 ..     941     996 ..     919     998 .. 0.78
   2 ?    6.6  21.6    0.0054         8      11     101 ..     987    1081 ..     980    1083 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.03
       DHR10  55 akkklkelrdaleekeielrelerkeerlqrqlenaeeklerlreqaeekreaaka 110
                  + k+ el + + ++++e + l ++ e  + q+++++ + + l+ + +e + +a++
  KHJ33963.1 941 LENKVVELTQSVGSMKRENKALVTQVENYENQIKSWKLRHNALETRTKELQSEANQ 996
                 45678888888899999999999999999999999999999999888888777766 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0054
       DHR10   11 laelErkarelqakidalqvvekdlrsciklleeieaelakleeakkkl....kelrdaleekeielrelerkeerlqrqlenaeeklerlreqa 101 
                   +el+  a++  ++++ l+v+e+d++++    +e +a++++l+e++++l    k+ +++lee ++ ++  e+++  l++ql+  +++le +r+ a
  KHJ33963.1  987 TKELQSEANQAGISAARLAVMEEDMKKLQISFDESAANIKRLQEEERELrellKKSNAQLEETQRMSSAHETEKLTLRQQLAELQDQLELARRGA 1081
                  5788999999999*********************************997222255688999999999999*******************999865 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   7.9    0.0065       9.7     198     301 ..     981    1081 ..     947    1098 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0065
        FUSC  198 lalealrsqaayesprirararalrrllsrmlallallsslarllarlraeeaaavpelaallaelaaleaaaaaealeaalaalrarlralrrale 294 
                  +ale+  + +  e ++    a++l+ +  +m  l  ++++ a + +rl++ee++ ++ l++  a+l++   +++++a+e++  +lr++l++l+ +le
  KHJ33963.1  981 NALETRTKELQSEANQAGISAARLAVMEEDMKKLQISFDESAANIKRLQEEERELRELLKKSNAQLEE--TQRMSSAHETEKLTLRQQLAELQDQLE 1075
                  57788888888888888888999999999999999999999999999999999998879999999999..67899********************99 PP

        FUSC  295 adadtaa 301 
                    a ++a
  KHJ33963.1 1076 -LARRGA 1081
                  .444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1577 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1663  (0.0927548); expected 358.6 (0.02)
Passed bias filter:                      610  (0.0340231); expected 358.6 (0.02)
Passed Vit filter:                       108  (0.00602376); expected 17.9 (0.001)
Passed Fwd filter:                        35  (0.00195214); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 1.26u 0.33s 00:00:01.59 Elapsed: 00:00:00.50
# Mc/sec: 9425.34
//
Query:       KHJ33964.1  [L=397]
Description: putative nucleosome assembly protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-98  328.7  10.2    2.3e-98  328.7  10.2    1.5  2  NAP       Nucleosome assembly protein (NAP)


Domain annotation for each model (and alignments):
>> NAP  Nucleosome assembly protein (NAP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  328.7  10.2  1.3e-102   2.3e-98       1     270 []      86     343 ..      86     343 .. 0.94
   2 ?   -5.2   2.6      0.84   1.5e+04      66      68 ..     373     375 ..     353     393 .. 0.41

  Alignments for each domain:
  == domain 1  score: 328.7 bits;  conditional E-value: 1.3e-102
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--S.............................--SSSSTTSTTHHHHHHHTS CS
         NAP   1 rrveaLkklqkelskleaefqeevlelekkyaalykplyekrseIingesepteeeveakedekeeeeeeeekeeekeeekkeeakgipeFWltvlknv 99 
                 rrv+ Lk +qk++skleaefqeevlelekky a+++ply krs+I+ng+ ep++eev+a+e+ek++   e+e+ ++++ ++++e kgipeFWl+++kn 
  KHJ33964.1  86 RRVAGLKGVQKQHSKLEAEFQEEVLELEKKYFAKFTPLYSKRSKIVNGQIEPSDEEVKAGENEKDK---EDESVKTADVKESSEIKGIPEFWLSAMKNQ 181
                 69*******************************************************999754444...457788888899999*************** PP

                 HHHHTT--HHHHHHHTTEEEEEEEE-------EEEEEEEE-S-SSB--SEEEEEEEE----........----EEEEEE----B-TT--TTS------- CS
         NAP 100 ellaeliqerDepiLkhLkdirveyllskekegFtleFeFdeNpyFtnevLtktyilksevdkedpfiydgpeiekaegckIdWkegkdvtvktvkkkq 198
                   la +i++rDe +Lk L d+r+eyl +  k+gF+l FeF+eN++Ftn++Ltkty++++e+ ++ +fiyd     +aeg kIdWk +kd+tv++++kkq
  KHJ33964.1 182 ASLAGMITDRDEAALKDLIDVRMEYL-E--KPGFRLIFEFAENEFFTNKILTKTYFYQNESGYGGDFIYD-----HAEGEKIDWKADKDLTVRVESKKQ 272
                 ************************95.4..59*****************************66666****.....************************ PP

                 ---...-------------GGGGS--B---------------HHHHHHHHHHHHHHHHHTHHHHHHHHHHT. CS
         NAP 199 knkktketrtvtkkvpkeSFFnfFsppkvpeeeeeeeeeeeeleelleadyeigealkdkiiPkAveyFtge 270
                 +nk+tk+tr+v+k+vp++SFFnfFsppk+p++++ + + ++++ee+le dy++ge++k+k+iP+A+++Ftge
  KHJ33964.1 273 RNKNTKQTRVVKKTVPTDSFFNFFSPPKAPSDDD-DIDAATDIEERLELDYQLGEDIKEKLIPRAIDWFTGE 343
                 ********************************76.66669*******************************7 PP

  == domain 2  score: -5.2 bits;  conditional E-value: 0.84
                 ... CS
         NAP  66 eee 68 
                 ++e
  KHJ33964.1 373 DDE 375
                 111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1255  (0.0699983); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 2727.39
//
Query:       KHJ33965.1  [L=470]
Description: putative aspartic protease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-71  240.9   0.8    2.8e-71  240.5   0.8    1.1  1  Asp             Eukaryotic aspartyl protease
    7.9e-13   49.0   1.2    4.2e-12   46.7   1.2    2.2  1  TAXi_N          Xylanase inhibitor N-terminal
      0.003   18.1   0.3       0.61   10.8   0.1    3.5  2  Asp_protease_2  Aspartyl protease
  ------ inclusion threshold ------
      0.084   12.7   0.0       0.23   11.2   0.0    1.9  1  TAXi_C          Xylanase inhibitor C-terminal


Domain annotation for each model (and alignments):
>> Asp  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.5   0.8   6.2e-75   2.8e-71       2     314 ..      67     397 ..      66     398 .. 0.91

  Alignments for each domain:
  == domain 1  score: 240.5 bits;  conditional E-value: 6.2e-75
                 EEEEEEETTTTEEEEEEEETT--SEEEEBTT...ESTSHC...HHTSS-B-GGG-TT-EEEEEEEEEECTTS.EEEEEEEEEEEEETTEEEEEEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp   2 YfgeisiGtpeqkftvifDTGSsdlWVpssk...ckkssa...ckshstydpskSstykkngkslsisYGdg.svsGflsqdtvkvggltvknqefgea 93 
                 Y+ +i++Gtp+q++++ +DTGSsdlWV   k   c+   +   c+s  +yd++ Ssty    ++++isY dg  ++G +++d  ++gg ++ +++fg  
  KHJ33965.1  67 YLFNITLGTPPQTLRLHLDTGSSDLWVNTPKstlCSS--KldpCSSTGMYDANTSSTYDFIASNFNISYVDGsGAEGDYVTDVLTLGGKSIDKFQFGIG 163
                 999************************9888455554..3346*****************************99***********************99 PP

                 EEESSHHHTTSSSSEEEE-S-GGGSCGG...SCCHHHH....HHHTTSSSSSEEEEEE-STTSSEEEEEESSEEGGGEEEEEEEEEESS....TSSTEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxx RF
         Asp  94 tkepgstflaakfdGiLGlgfkeisvee...atpvfdn....lvsqglikepvfsvylnreeeeggeivfGgvDeskykGsltyvpvts....kgywqi 181
                  + ++        +GiLG+g+  ++v+     + ++ n    +vs glik+ ++s++ln  ++++g+i+fGgvD++++ G+l+++pv++    +  + i
  KHJ33965.1 164 YESSS-------PQGILGIGYAVNEVQVgraGKKPYLNlplrMVSDGLIKSTAYSLWLNDLDASTGNILFGGVDTAQFVGNLQTLPVQKiggvHSEFLI 255
                 98888.......6********999887766766678888999***********************************************9988888*** PP

                 EEEEEEETTEEEEEEEEEEEEEETTCSSEEEEHHHHHHHHHHHTTEEEETTCEEEEETTGGGGSEEEEEEETTEEEEEEGGGGEEEESSSTTSEEEESE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp 182 elesvtvggktvlcssgcqailDtGTsllalptsivekiakaigakksesegeyvvdCdslsslpdisftiggakitvpvselvlkeeeseesqCilgl 280
                 +++++++g + ++++ g +++lD+G sl +lp+    +i + igak+se+eg   v C+  +s+ +i f+++g  i+v +selv+ +++ + +q  l++
  KHJ33965.1 256 TMTGLSIGRNVLATDLGQAVLLDSGSSLSYLPDALTGSIYSLIGAKYSEDEGAAYVPCAYAQSSVTIDFEFSGPVIKVDMSELVIPVSSVS-NQGSLAF 353
                 ************************************************************************************9877543.3333333 PP

                 ..........EECCTSSSEEEEHHHHTTEEEEEETTTTEEEEEE CS
                 ..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp 281 ..........vseeegdlwiLGdvFlrsayvvfdldnnrvglAe 314
                           +++ +g + +LGd+F+rsay v+dldnn++++A+
  KHJ33965.1 354 sdgtpaclfgIAPAGGGSSVLGDTFIRSAYLVYDLDNNEISIAQ 397
                 33333333333********************************8 PP

>> TAXi_N  Xylanase inhibitor N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.7   1.2   9.3e-16   4.2e-12       1     142 [.      67     179 ..      67     228 .. 0.77

  Alignments for each domain:
  == domain 1  score: 46.7 bits;  conditional E-value: 9.3e-16
      TAXi_N   1 YlvsisiGtppqplklvvDtGsdltWvqCkpckacssqkkpvfdpsksstykavpcssslCkaceasssaksgsssstceyeisygadgssssGvlatd 99 
                 Yl +i +Gtppq+l l +DtGs+ +Wv+                +s+ +++k  pcss          +++s+ +  + +++isy  dgs ++G+++td
  KHJ33965.1  67 YLFNITLGTPPQTLRLHLDTGSSDLWVNT--------------PKSTLCSSKLDPCSSTGMY----DANTSSTYDFIASNFNISYV-DGSGAEGDYVTD 146
                 99***************************..............5677888999999999998....4555556666778899***6.************ PP

      TAXi_N 100 tltlsstdgksvkvpnlvfGCgksnlgglaagadGilGLGrgk 142
                 +ltl     ++++++++ fG g+  +++++   +GilG G++ 
  KHJ33965.1 147 VLTL-----GGKSIDKFQFGIGY--ESSSP---QGILGIGYAV 179
                 ****.....899***********..34444...6*****9875 PP

>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.1   0.00014      0.61       8      88 ..      78     175 ..      70     177 .. 0.75
   2 ?    2.3   0.0     0.058   2.6e+02      12      27 ..     275     290 ..     266     320 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00014
  Asp_protease_2   8 kpvrfllDTGasttlispela..eklglkvreseltvrvsgaggevkarlvrlds..................lklggltlknvpalvldlgeei 82 
                     +++r++lDTG+s + +++      + +l++ +s   + +  a+ +++ +++  +                   l+lgg +++ +++ +    +++
      KHJ33965.1  78 QTLRLHLDTGSSDLWVNTPKStlCSSKLDPCSS---TGMYDANTSSTYDFIASNFnisyvdgsgaegdyvtdvLTLGGKSIDKFQFGIGYESSSP 169
                     689999******999996555115555555554...3445556666666666664566777788888888888*****************99999 PP

  Asp_protease_2  83 dglLGm 88 
                     +g+LG+
      KHJ33965.1 170 QGILGI 175
                     ****96 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.058
  Asp_protease_2  12 fllDTGasttlispel 27 
                     +llD+G+s ++++++l
      KHJ33965.1 275 VLLDSGSSLSYLPDAL 290
                     79********999876 PP

>> TAXi_C  Xylanase inhibitor C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   5.2e-05      0.23      89     159 ..     325     395 ..     253     397 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.2e-05
                 -S----EEEEESSS-..EEEE-GGGGEEE-SSSEEEE-EEE--S--SSSEEE-HHHHBTS-EEEETTTTEEEE CS
      TAXi_C  89 gpavPtitlvlegga..ewtisgenllvkveggvvClafvesgvagesavviGglqlednllvFDleksrlgF 159
                 +++ P i++ + +       +s++ +l++ +g  +Cl  +    ag +++v+G   ++  +lv+Dl++++++ 
  KHJ33965.1 325 EFSGPVIKVDMSELVipVSSVSNQGSLAFSDGTPACLFGIAP--AGGGSSVLGDTFIRSAYLVYDLDNNEISI 395
                 444455555555522235556677777777777777654444..8***********************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       352  (0.019633); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3438.65
//
Query:       KHJ33966.1  [L=1320]
Description: putative cation-transporting atpase 4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-36  125.3   0.8    1.5e-36  125.3   0.8    2.6  2  P5-ATPase        P5-type ATPase cation transporter
      2e-26   92.6   0.0    6.2e-26   91.0   0.0    1.9  1  E1-E2_ATPase     E1-E2 ATPase
    7.4e-14   52.5   0.1    3.2e-05   24.3   0.0    3.3  3  Hydrolase        haloacid dehalogenase-like hydrolase
    0.00061   19.5   8.9    0.00061   19.5   8.9    2.5  4  Cation_ATPase_C  Cation transporting ATPase, C-terminus
     0.0034   17.0   0.0     0.0097   15.6   0.0    1.8  1  Cation_ATPase_N  Cation transporter/ATPase, N-terminus
  ------ inclusion threshold ------
      0.028   14.5   0.0       0.06   13.4   0.0    1.5  1  Cation_ATPase    Cation transport ATPase (P-type)
       0.26   11.1   3.7        0.2   11.4   0.5    2.3  2  DUF4579          Domain of unknown function (DUF4579)
       0.94    9.6  10.9       0.11   12.6   0.9    3.2  3  MPS-4            MinK-related peptide, potassium channel acce


Domain annotation for each model (and alignments):
>> P5-ATPase  P5-type ATPase cation transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.3   0.8   6.7e-40   1.5e-36       1     125 []     164     283 ..     164     283 .. 0.94
   2 ?   -0.3   0.6      0.49   1.1e+03      23      40 ..    1270    1287 ..    1263    1294 .. 0.86

  Alignments for each domain:
  == domain 1  score: 125.3 bits;  conditional E-value: 6.7e-40
   P5-ATPase   1 edleieiaGyrtsrwrlalyilgciltlGlllLlfrWlPewrvkltgkpcpLkeadvvliedefgelsvkkvrkleyerplstvfsseqeege.ekeie 98 
                 edl+i i+G++ts+++++ly+++cil++G l+L +rW+P+w++ l+g++cpL+++++v ie+++gels++++++++y++++stvf      g+ ek + 
  KHJ33966.1 164 EDLNISIVGFQTSYFGYILYVIACILSFGALYLALRWIPRWKIYLIGTKCPLRKCSWVMIENQWGELSIQDINTKNYGYCISTVF------GRiEKYHI 256
                 799**********************************************************************************......66344444 PP

   P5-ATPase  99 skeseekdpelqqlryfdyryiryvwn 125
                 + + e++dp+++++r++dyry+r++++
  KHJ33966.1 257 DDHFEDEDPIMNNIRILDYRYLRLIYH 283
                 5556799*******************8 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.49
   P5-ATPase   23 gciltlGlllLlfrWlPe 40  
                  + il+lGl + +  Wl e
  KHJ33966.1 1270 IFILSLGLGYFISAWLSE 1287
                  579************976 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.0   0.0   2.8e-29   6.2e-26       8     180 ..     402     608 ..     398     609 .. 0.95

  Alignments for each domain:
  == domain 1  score: 91.0 bits;  conditional E-value: 2.8e-29
                   EEE-TTS-EEEEGGG--TTSEEEEET..T-B--SEEEEEEE-SEEE-TTTS---S-EE-.....................G-TTEE-TT-EEEE... CS
  E1-E2_ATPase   8 kvirdgteeeidakelvpGDivllka..gdrvpaDgrivegsaevdesaLTGEslpvek.....................ekgdmvfsGtvvvs... 78 
                   +v+r+  ++ ++++elvpGD+ ++     ++ p+D  ++ g + v+es+LTGEs+p++k                       ++ +f+Gt +++   
    KHJ33966.1 402 RVLRNSFWRYVASSELVPGDVYEVTDpaLKQFPCDSLLLTGDCIVNESMLTGESVPISKtpitqealqildlgaisiapeISKHFLFGGTRIIRakr 498
                   799******************888643399*********************************************999976**************** PP

                   ........-EEEEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-STTTSSTTHHHHHHHHHHHHHS-TTHHHHH CS
  E1-E2_ATPase  79 ........geakavVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvflialllgkslaeallralallvaaiPcaLplav 167
                             a   V++tg +t+ g ++r++  +k++ +++ k   +++ v++ ++l+ +++ ++ +++l+ +++ +++ral+l+++++P+aLp+++
    KHJ33966.1 499 piedsngdAVALSMVVRTGFSTTKGALVRSMLFPKPSGFKFYKDSFRYILVMAGIALIGFIVSLINFIHLQLEWNLIIVRALDLITIVVPPALPATL 595
                   ******66666678*********************************************************************************** PP

                   HHHHHHHHHHHHH CS
  E1-E2_ATPase 168 plalalgarrlak 180
                    + + ++++rl+ 
    KHJ33966.1 596 NIGTNFALSRLKS 608
                   ********99975 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.2     0.002       4.5       2      15 ..     626     639 ..     625     674 .. 0.84
   2 !   24.3   0.0   1.4e-08   3.2e-05      57     157 ..     783     911 ..     751     932 .. 0.81
   3 !   16.6   0.0   3.2e-06    0.0072     170     210 .]    1001    1043 ..     984    1043 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.002
                 SEEEEESBTTTBCH CS
                 xxxxxxxxxxxxxx RF
   Hydrolase   2 ktvvfDkdGTLttg 15 
                 + v+fDk+GTLt+ 
  KHJ33966.1 626 DIVCFDKTGTLTED 639
                 689*********64 PP

  == domain 2  score: 24.3 bits;  conditional E-value: 1.4e-08
                 H.HHHHHETTTEHHHHTHHHHHHHH....HCHHHHHHHHHHHHHHCHHHHHH.......................TTHHHHHHHHHHTHHBHTTHHHHH CS
                 x.xxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxx.......................xxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  57 l.tgfatfigrgayaigkpewltal....dippdlgaaigsaqsqgrtvall.......................qaralavftiadplkvkpeaaeav 127
                 + t+   + g+  y +g pe++++       ppd+++    +  +g  v+ l                       + +  + + ++++  +kp +a ++
  KHJ33966.1 783 ViTRKYGSLGCDIYVKGAPECMKSIctsaSLPPDFDQVLNHYTHRGFRVIALatkhiiklswvkiqkmhredaesELDFIGFIIFENK--LKPNTATVL 879
                 3334444456669*********************************************************988777788889999988..********* PP

                 HHHHHTTEEEEEEESSEHHHHHHHHHHTT..G CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx..x RF
   Hydrolase 128 asLkaagievvlltgdnpetaeraanqlG..d 157
                  +L +a i+  ++tgdn  ta ++a++++  +
  KHJ33966.1 880 DELTRAAIRKLMCTGDNILTAISVARECNliN 911
                 ***************************99541 PP

  == domain 3  score: 16.6 bits;  conditional E-value: 3.2e-06
                  S..STTTSHHHHHHHHHHHTSTGGGEEEEESSHHHHHHHHHTT CS
                  x..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  170 t..vakpspegkvaaireLqgkpeevamVGDgvnDaaalaaAg 210 
                  +  +a  sp+ k++++++Lq     + + GDg+nD  al+aA+
  KHJ33966.1 1001 GqvFARMSPDEKNELVEKLQSIDYCCGFCGDGANDCGALKAAD 1043
                  3459999*************666689****************8 PP

>> Cation_ATPase_C  Cation transporting ATPase, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.1         5   1.1e+04      54      67 ..     181     195 ..     171     239 .. 0.64
   2 ?   -1.3   0.0      0.66   1.5e+03      88     112 ..     363     387 ..     288     398 .. 0.74
   3 ?   -2.9   0.3       2.1   4.8e+03      53     145 ..     546     563 ..     532     587 .. 0.51
   4 !   19.5   8.9   2.7e-07   0.00061       7     177 ..    1114    1284 ..    1109    1289 .. 0.81

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 5
  Cation_ATPase_C  54 i.liqgllqalvtll 67 
                      i +++++++++ +l+
       KHJ33966.1 181 IlYVIACILSFGALY 195
                      222222222222222 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.66
  Cation_ATPase_C  88 nyaqtmaFitlvlsqifnalnlrsr 112
                       y  +++Fi+  +s +  ++ +rs+
       KHJ33966.1 363 FYYAACIFIISLVSIVTTLFETRST 387
                      4556777777777777777777773 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 2.1
  Cation_ATPase_C  53 riliqgllqalvtllvffltlllfgisekenklssnyaqtmaFitlvlsqifnalnlrsrreslfkfsglfsnkllllaillslllqvlivyv 145
                      +il+++                                                                           +++l+ ++++++
       KHJ33966.1 546 YILVMA---------------------------------------------------------------------------GIALIGFIVSLI 563
                      332222...........................................................................222222222222 PP

  == domain 4  score: 19.5 bits;  conditional E-value: 2.7e-07
  Cation_ATPase_C    7 iqiLwinLvtDllpalaLaleppekdimkrpPrkkkepliskkmlrriliqgllqalvtllvffltlllf.....gisekenkls...snya 90  
                        q L+i+L+  l  a+ ++     + i++r+   ++++l+s+k+l+  ++q +l ++++ + ffl  +++     +     +k++    n++
       KHJ33966.1 1114 FQYLFIDLMLILPIAIFMGWTSS-YPILNRKR--PTANLVSSKVLTPLFGQIILCIIFQSIGFFLIRKQIwyippH----LDKEKsniRNSG 1198
                       57799999988888888888877.57888844..79************9999999999999999888855544431....22222345899* PP

  Cation_ATPase_C   91 qtmaFitlvlsqifnalnlrsrreslfkfsglfsnkllllaillslllqvlivyvp..glnavfgtaplsleewlialllalvvllvde 177 
                       +t+ F+   +  if  ++l     + f+ + + +n  l++ i ++l l++ ++  p   l ++++++++s+   + +l l+l +++ + 
       KHJ33966.1 1199 NTVLFLLSCFEYIFSGIVLCA--GPPFR-QAWYQNLPLVITIGVTLFLTIYLLISPskKLSQFMELTRVSWDFKIFILSLGLGYFISAW 1284
                       ****************99999..67777.777799999999999999999999998445999999999999999999999999998655 PP

>> Cation_ATPase_N  Cation transporter/ATPase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   4.3e-06    0.0097      16      68 ..     305     356 ..     301     357 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4.3e-06
  Cation_ATPase_N  16 dlenGLtqaeaaerlkkyGpNelkekkkkslwvkllkqftnplvilLlvaalv 68 
                      +   G++ +e ++r+  +G+N + + ++k+++++l +++ +p++++ +++ ++
       KHJ33966.1 305 SVRAGIDGDEKEARRLIFGKNSI-DIEQKNVFQLLTDEVLHPFYMFQVASLVL 356
                      56789******************.*********************99988776 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   2.7e-05      0.06      45      90 ..     765     810 ..     749     811 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.7e-05
  Cation_ATPase  45 etkkvqeipFnssrKrmsvvlklepekkvrlyvKGApeiilkrCth 90 
                    e  ++++++F    +r+sv+ +   + +  +yvKGApe + + Ct+
     KHJ33966.1 765 EIGILKIFEFATHLRRASVITRKYGSLGCDIYVKGAPECMKSICTS 810
                    566789****************99****************999996 PP

>> DUF4579  Domain of unknown function (DUF4579)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.5   8.7e-05       0.2       5      56 ..     333     384 ..     329     413 .. 0.81
   2 ?   -1.0   0.2      0.55   1.2e+03      40      84 ..    1241    1286 ..    1231    1307 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 8.7e-05
     DUF4579   5 elakrLkknpfyPFeevkpnvfvleylnerlwkgvllfivsvvvvslrlise 56 
                 ++++ L+++  +PF + +   +vl  l++ ++++  +fi+s+v ++ +l+  
  KHJ33966.1 333 NVFQLLTDEVLHPFYMFQVASLVLWCLDDYFYYAACIFIISLVSIVTTLFET 384
                 678899*********************************9998665544433 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.55
     DUF4579   40 llfivsvvvvslrlisevanqealta.flvfgllvglwliisslek 84  
                  l + + +++   + +s+ ++ +++++ f +f l +gl   is +  
  KHJ33966.1 1241 LFLTIYLLISPSKKLSQFMELTRVSWdFKIFILSLGLGYFISAWLS 1286
                  4444555666678899999999999999999877777333444433 PP

>> MPS-4  MinK-related peptide, potassium channel accessory sub-unit protein 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.9     5e-05      0.11      35      64 ..     171     201 ..     163     207 .. 0.89
   2 ?   -3.2   0.3       4.4   9.8e+03      30      53 ..    1107    1130 ..    1093    1137 .. 0.75
   3 ?    2.7   0.2      0.06   1.3e+02      41      62 ..    1228    1249 ..    1208    1256 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 5e-05
       MPS-4  35 isystkyfdfllvviisvvslglvylll.wi 64 
                 + + t yf ++l vi +++s+g++yl l wi
  KHJ33966.1 171 VGFQTSYFGYILYVIACILSFGALYLALrWI 201
                 679**********************976465 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 4.4
       MPS-4   30 sscnrisystkyfdfllvviisvv 53  
                  s+ n   +   + d++l++ i+++
  KHJ33966.1 1107 SASNLGDFQYLFIDLMLILPIAIF 1130
                  445666777778888888888776 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.06
       MPS-4   41 yfdfllvviisvvslglvylll 62  
                  y ++ lv++i v  +  +yll+
  KHJ33966.1 1228 YQNLPLVITIGVTLFLTIYLLI 1249
                  666779**************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.85u 0.30s 00:00:01.14 Elapsed: 00:00:00.46
# Mc/sec: 8694.53
//
Query:       KHJ33967.1  [L=269]
Description: hypothetical protein EV44_g3646 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      0.007   16.0   0.0     0.0098   15.5   0.0    1.2  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
      0.042   14.2   0.1      0.078   13.4   0.1    1.5  1  DUF4094   Domain of unknown function (DUF4094)


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.1e-06    0.0098      95     218 ..      55     183 ..      41     195 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.1e-06
       RVT_2  95 vyvkqPpGfeidreeekvykLnkslyGlkqapllWneki.dkvLkklgferseaesGlyvrgtgegk..livalyvddlliagsdiki.ledvkke... 186
                  y+++P       ++e + k+ k lyG+  a+  W+ +   +  ++l +++s+    l   ++   k   i++l  dd li ++d     e+++ e   
  KHJ33967.1  55 FYIRPPIELG---NKETILKVVKPLYGVPEAGNHWFYTYhRHHTQNLALKQSTFDPCLLYSTNETKKgyGILGLQTDDTLILADDDFAaEEEIQLEkak 150
                 5666665554...4599******************7665156788999****9998865544333333489*******998887654404444433111 PP

       RVT_2 187 .lakkfklkdlgkvskfLGieiaqeaggiklsl 218
                  +akk kl   ++  +f G +i +e + + ++l
  KHJ33967.1 151 fIAKKRKLLTETESLNFNGGDINKEKDSLSICL 183
                 133333443444444566666666666666655 PP

>> DUF4094  Domain of unknown function (DUF4094)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   8.7e-06     0.078      41      76 ..     185     221 ..     155     223 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 8.7e-06
     DUF4094  41 vsedcds.kdaesrskdilgevskthkaiqtLdktis 76 
                  + +c + + +es++ di+g  skt+ka+++Ld+ +s
  KHJ33967.1 185 QEMHCRNlRLVESEPTDIVGTRSKTRKAVSQLDQFVS 221
                 3467999999***********************9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       344  (0.0191868); expected 358.6 (0.02)
Passed bias filter:                      262  (0.0146132); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.19s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 2201.58
//
Query:       KHJ33968.1  [L=261]
Description: putative proteasome subunit alpha type 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.8e-49  165.4   0.1    1.3e-48  165.0   0.1    1.2  1  Proteasome      Proteasome subunit
    7.6e-11   41.5   0.2    1.2e-10   40.8   0.2    1.3  1  Proteasome_A_N  Proteasome subunit A N-terminal signature


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.0   0.1   1.5e-52   1.3e-48       1     190 []      29     215 ..      29     215 .. 0.96

  Alignments for each domain:
  == domain 1  score: 165.0 bits;  conditional E-value: 1.5e-52
                 HHHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHC CS
  Proteasome   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrs 99 
                 vk+G+ vvGi +k +++l++ kr+    +l s+ + +Ki+ id+h+g+a+aGla+Dar+l +++r++++  rl++gr ip++r+v++++ ++q++tq++
  KHJ33968.1  29 VKQGSVVVGIVSKTHAILVVLKRNA--EEL-SSYQ-KKIIAIDEHLGIALAGLASDARVLSNFMRSQCSASRLTFGRAIPLSRIVSSISGRAQSNTQNY 123
                 799**********************..888.9997.*************************************************************** PP

                 TTTTTSEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHH..STTBSHHHHHHHHHHHHHHHH.HHBTTSCSSEEEEEE CS
  Proteasome 100 grrpfgvslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekey..kedltleeavelavkalkeal.erdklsgknievavi 190
                 grrp+gv+lli+gvd+ g p+L++++psG   e   a+aiG +s++a+t+le+++  + ++++ee+v++ ++alke+l ++ +l  +n +v+++
  KHJ33968.1 124 GRRPYGVGLLIVGVDDSG-PHLFEFQPSGMTQEM-IACAIGARSQMARTYLERNVerFANCSREELVKHGLQALKESLtQDKELAIENTSVGIV 215
                 ***************777.***************.6*******************999******************994455599999988876 PP

>> Proteasome_A_N  Proteasome subunit A N-terminal signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.2   1.3e-14   1.2e-10       1      23 []       6      28 ..       6      28 .. 0.97

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 1.3e-14
  Proteasome_A_N  1 YDrslttFSPdGRLfQVEYAmkA 23
                    YD++  tFSP+GR+fQVEYA +A
      KHJ33968.1  6 YDNDSVTFSPQGRIFQVEYASEA 28
                    9*******************887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       691  (0.0385409); expected 358.6 (0.02)
Passed bias filter:                      546  (0.0304535); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1957.57
//
Query:       KHJ33969.1  [L=227]
Description: putative lysine decarboxylase-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.3e-28   97.3   0.0    1.2e-27   96.6   0.0    1.3  1  Lysine_decarbox  Possible lysine decarboxylase
    6.3e-05   22.6   0.0    0.00019   21.1   0.0    1.7  1  LDcluster4       SLOG cluster4 family


Domain annotation for each model (and alignments):
>> Lysine_decarbox  Possible lysine decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.6   0.0   1.3e-31   1.2e-27       9     130 ..      68     208 ..      60     210 .. 0.89

  Alignments for each domain:
  == domain 1  score: 96.6 bits;  conditional E-value: 1.3e-31
                      HHTTS-..EEEEEECCHHHHHCC............TTT-SEEEEESSHHHHHHHHHHH......ESEEEE-S-SHHHHHHHHHHHHHHHTTSS- CS
  Lysine_decarbox   9 leaggr..viGiipkillaeeap............neevnelvivedmeeRkealvel......adafvilPGGiGTleElleiltliqlgkhq 82 
                      + ++g+  v+Giip   +++e +            +++++++++v++m+eRk+ ++++      + +f++lPGG+GT+eEl+e+ t+  lg+h+
       KHJ33969.1  68 TSLSGPdaVHGIIPAPFVRHENSdfetdislllpdKKIYGKTTVVKNMHERKQLMISEvlsgapGSGFIALPGGYGTMEELMEMTTWNGLGIHD 161
                      555555559**********88888*******************************987555544699*************************** PP

                      S.EEEEEEGGGCCHHHHHHHHHHHHTTSS-GGGGGCEEEESSHHHHHH CS
  Lysine_decarbox  83 kvPiillnpkgyydkllefletlveegtisekareliivvddpeevle 130
                      k  ++++n++gy+++ll ++e++ve+g+is++  ++i+ ++++++ ++
       KHJ33969.1 162 K-GVVVFNIQGYWSNLLSWVENAVESGFISANTGAVIKEAKTADQCIQ 208
                      *.**********************************999999998776 PP

>> LDcluster4  SLOG cluster4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   2.1e-08   0.00019       3     113 ..      17     148 ..      15     159 .. 0.71

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 2.1e-08
  LDcluster4   3 kigVmGsaeteakeealelaeelGrliAkegavlltGgrt.GvmeaaskGakeagG..ltvGilpassekehsnk..............yvdiiiyTGl 84 
                  i+V+  ++++ ++e +e a+el+++  ++++ l+ Gg t G+m   +k   +  G   + Gi+pa   ++++++              y +  ++ ++
  KHJ33969.1  17 VICVFCGSSQGKNSEFMESARELAHAFHQNNVSLIYGGGTcGLMGELAKVLTSLSGpdAVHGIIPAPFVRHENSDfetdislllpdkkiYGKTTVVKNM 115
                 6899755554577889***********************99*********99999855688****9444443333666778775555544444444454 PP

  LDcluster4  85 g....lagRnlilvlssdvviaiggrsGTlsEi 113
                      l+  +++        ia++g++GT++E+
  KHJ33969.1 116 HerkqLMISEVLSGAPGSGFIALPGGYGTMEEL 148
                 400003333444444567889999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 1725.31
//
Query:       KHJ33970.1  [L=1519]
Description: putative anucleate primary sterigmata protein a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-46  157.7   0.6    6.4e-46  155.4   0.2    2.6  2  Mcp5_PH        Meiotic cell cortex C-terminal pleckstrin homo
    5.8e-05   23.5   0.0    0.00021   21.7   0.0    2.0  1  PH             PH domain
  ------ inclusion threshold ------
        6.2    6.3  36.7      0.084   12.4   5.4    4.5  4  Filament       Intermediate filament protein


Domain annotation for each model (and alignments):
>> Mcp5_PH  Meiotic cell cortex C-terminal pleckstrin homology
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       2.2   1.3e+04      77      97 ..    1170    1189 ..    1160    1191 .. 0.71
   2 !  155.4   0.2   1.1e-49   6.4e-46       2     121 ..    1234    1351 ..    1233    1352 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 2.2
     Mcp5_PH   77 nplpkglkefnksililtpdr 97  
                  +p+p+   + + s++i+tp+r
  KHJ33970.1 1170 SPTPRPN-QSYGSVVIQTPTR 1189
                  4444444.47899*****998 PP

  == domain 2  score: 155.4 bits;  conditional E-value: 1.1e-49
     Mcp5_PH    2 vidaiaqtmiGeylyKyvrkrkskgssekrhkryvwihpyertllWsskqPksekakegksksvaiesvlsvedenplpkglkefnksililtpdra 98  
                  +i+ai+qtmiGeyl+Ky+rk+   ++sekrh+ry+w+hpy+rtl+Ws+++P+ +  +e k+ksv ie+v++v+d+np+p+gl  ++ks++i+tp+ra
  KHJ33970.1 1234 MISAITQTMIGEYLWKYTRKTGRGVMSEKRHRRYFWVHPYTRTLYWSNRDPSLAGRAELKAKSVPIEAVRVVTDDNPMPPGL--HRKSLIIITPNRA 1328
                  899******************66666********************************************************..************* PP

     Mcp5_PH   99 lkltaetrerhevWltaLsyllh 121 
                  +k+ta+t +rhe+W+++Lsyll 
  KHJ33970.1 1329 VKFTATTGQRHETWFNSLSYLLL 1351
                  ********************985 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   3.5e-08   0.00021       5     102 ..    1245    1348 ..    1241    1350 .. 0.86

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 3.5e-08
                  EEEEEETSSSSC.....SEEEEEEEEETTE.EEEESST...TCTTESSEEEEEESTTEEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHH CS
          PH    5 GwLlkkgsgkkk.....swkkrwfvLkdse.llyyknd...ksekdkepkgsislsncevvevvatedpkrkfcfelriverngsrtyllqasseee 92  
                  ++L+k++ + +      + ++r+f+++     ly++n+      +++ + +s++++ ++vv ++ +++p+  +  +l+i   ++ r + ++a++ + 
  KHJ33970.1 1245 EYLWKYTRKTGRgvmseKRHRRYFWVHPYTrTLYWSNRdpsLAGRAELKAKSVPIEAVRVVTDD-NPMPPGLHRKSLIII--TPNRAVKFTATTGQR 1338
                  568888877777888899999******6667*******99999999999************986.779999999999888..5569*********** PP

                  HHHHHHHHHH CS
          PH   93 rkeWikaiqs 102 
                   ++W ++++ 
  KHJ33970.1 1339 HETWFNSLSY 1348
                  ******9975 PP

>> Filament  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   1.7     0.009        54     208     280 ..      55     129 ..      29     139 .. 0.77
   2 ?    4.6   2.3    0.0035        21     222     286 ..     200     267 ..     176     270 .. 0.80
   3 ?   12.4   5.4   1.4e-05     0.084     180     269 ..     292     381 ..     274     389 .. 0.92
   4 ?    2.6   3.9     0.013        81     213     267 ..     410     464 ..     402     478 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.009
                 XXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 208 sealrsakeeitelrrqiqsleieleslkkqkasleaqlaeleerleae..leklqeklseleeelaeireemar 280
                 ++a r+ +  ++e+ r+iq  +    +l +q++ le +l+e+ ++ ++e    +l++kl e+e++  e+ +e ar
  KHJ33970.1  55 EQAKRALEAHLAETERRIQDTSRLGTALLQQRKDLEGRLEEIGKQQDEEniTPELRQKLLEIEKDYYEVGRESAR 129
                 445566778899999999999988899999999999999999777666522457888888888887777666655 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0035
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHH CS
    Filament 222 rrqiqsleieleslkkqkasleaqlaeleerleaeleklqeklseleeelaeiree...marqlreYq 286
                   ++ s   +l++l ++k+   +++a  + rle e+e + + l++l+e  ++ ++e   ++ ql+eY+
  KHJ33970.1 200 STSLLSQVRHLQALLAEKDDHMKNIALENSRLEVEIEGFTDRLRSLDESGERYKDEnwnLETQLQEYK 267
                 55555666788999999999999999999999999999999999999988888864333899999997 PP

  == domain 3  score: 12.4 bits;  conditional E-value: 1.4e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 180 elaeknreeaeewykskleelqeaaeknsealrsakeeitelrrqiqsleieleslkkqkasleaqlaeleerleaeleklqeklselee 269
                 + a+k  +e+++ y + lee + a + ++++l sak+++ e+  + +sl+ ++++l +q++ l +++a    rle + e++  ++++l+ 
  KHJ33970.1 292 SAAQKDLDEIKSAYAKLLEEHNLALKYSDAELGSAKRNLIEIETERNSLQQKVDELLGQNRELVKAIAYQRGRLEDKNENYGVAIEDLDM 381
                 5688999*************************************************************************9999999886 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.013
                 X-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 213 sakeeitelrrqiqsleieleslkkqkasleaqlaeleerleaeleklqeklsel 267
                 + k+ ++ ++r+iq+l++++   k +k  l++ l+++ ++le+ + ++ ++  ++
  KHJ33970.1 410 TLKSSLHHAHRMIQNLKSNIYREKTEKLELKRLLQDTRDELEQRRGEIGQSNGKK 464
                 56889999**************************999999998887776655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1519 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1473  (0.0821574); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.04u 0.30s 00:00:01.34 Elapsed: 00:00:00.51
# Mc/sec: 9016.78
//
Query:       KHJ33971.1  [L=328]
Description: putative pre-mrna splicing factor cwc24 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-07   31.4   2.3    1.2e-07   31.4   2.3    1.9  2  zf-CCCH       Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    1.4e-07   31.3   6.6    2.5e-07   30.4   6.6    1.4  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    1.8e-06   27.7   9.2    3.6e-06   26.7   9.2    1.5  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    3.6e-06   26.8  11.5    6.8e-06   25.9  11.5    1.5  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    6.2e-06   26.1   6.1    1.3e-05   25.1   6.1    1.5  1  zf-RING_UBOX  RING-type zinc-finger
      1e-05   25.4  10.5    1.9e-05   24.5  10.5    1.4  1  zf-RING_5     zinc-RING finger domain
    6.8e-05   22.8   5.6    6.8e-05   22.8   5.6    1.9  2  zf_CCCH_4     Zinc finger domain
    0.00028   20.7   5.9    0.00056   19.7   5.9    1.5  1  Prok-RING_4   Prokaryotic RING finger family 4
     0.0016   18.5   5.2     0.0016   18.5   5.2    1.7  1  zf-RING_10    zinc RING finger of MSL2
     0.0019   17.9   1.9     0.0019   17.9   1.9    2.5  2  zf-CCCH_4     CCCH-type zinc finger
     0.0026   18.1   7.4     0.0053   17.1   7.4    1.6  1  zf-RING_2     Ring finger domain
  ------ inclusion threshold ------
       0.04   14.1   9.1      0.098   12.8   9.1    1.7  1  zf-C3HC4_4    zinc finger of C3HC4-type, RING
       0.24   11.7   4.9        0.5   10.7   4.9    1.5  1  zf-rbx1       RING-H2 zinc finger domain
       0.44   10.4   2.9       0.96    9.3   2.9    1.5  1  zf-Nse        Zinc-finger of the MIZ type in Nse subunit
        1.7    9.7   9.8       0.12   13.4   1.1    2.9  3  DUF1770       Fungal protein of unknown function (DUF1770)
          4    8.1   6.8        0.3   11.6   1.9    1.8  1  zf-CCCH_2     RNA-binding, Nab2-type zinc finger


Domain annotation for each model (and alignments):
>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   2.3   1.1e-10   1.2e-07       4      25 ..     170     191 ..     167     193 .. 0.92
   2 ?   -3.4   0.3         9     1e+04       6       9 ..     262     265 ..     260     266 .. 0.76

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 1.1e-10
                 HCBCHHHHHS--TTGGG-SSBS CS
     zf-CCCH   4 elCrffmrtGyCkyGdrCkFaH 25 
                   C+++++tG+C +Gd+Ck+ H
  KHJ33971.1 170 DVCKDYKQTGFCGFGDSCKYLH 191
                 68******************** PP

  == domain 2  score: -3.4 bits;  conditional E-value: 9
                 BCHH CS
     zf-CCCH   6 Crff 9  
                 Cr++
  KHJ33971.1 262 CRHY 265
                 9998 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   6.6   2.2e-10   2.5e-07       4      46 ..     246     287 ..     244     291 .. 0.94

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 2.2e-10
                 B-TTTSSSBS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B CS
  zf-C3HC4_3   4 eCviClerprnvvllpCgHlvlCeeCaekllkrkkkCpiCrrp 46 
                  C++C+e+ +n v+ +C+H  +Ce+Ca k  k+ ++C  C ++
  KHJ33971.1 246 ACILCKEKYQNPVVTKCRHY-FCESCALKRYKKYQSCAACGSS 287
                 5*******************.*******************875 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   9.2   3.2e-09   3.6e-06       2      40 .]     247     284 ..     246     284 .. 0.95

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 3.2e-09
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLeekneCPlC 40 
                 C +C + +++p vvt+C H fC++C l+  ++ ++C  C
  KHJ33971.1 247 CILCKEKYQNP-VVTKCRHYFCESCALKRYKKYQSCAAC 284
                 9**********.****************999999**888 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9  11.5     6e-09   6.8e-06       1      41 []     247     284 ..     247     284 .. 0.99

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 6e-09
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 C++C+e++++p+ +++C+H fC++C +k +k  k+++C  C
  KHJ33971.1 247 CILCKEKYQNPV-VTKCRHYFCESCALKRYK--KYQSCAAC 284
                 ************.******************..*******9 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   6.1   1.2e-08   1.3e-05       1      38 [.     247     281 ..     247     282 .. 0.84

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 1.2e-08
  zf-RING_UBOX   1 CpIClelftdPlvlpCGHtFCreClwelskslegafkC 38 
                   C  C+e +++P+v++C H FC++C     k+ +++ +C
    KHJ33971.1 247 CILCKEKYQNPVVTKCRHYFCESCA---LKRYKKYQSC 281
                   889********5579**********...6666666666 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.5  10.5   1.7e-08   1.9e-05       2      43 ..     247     285 ..     246     286 .. 0.94

  Alignments for each domain:
  == domain 1  score: 24.5 bits;  conditional E-value: 1.7e-08
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCr 43 
                 C  C ek+   +++++t+C H+fCe+C+ k+ +k++ C +C+
  KHJ33971.1 247 CILCKEKY---QNPVVTKCRHYFCESCALKRYKKYQSCAACG 285
                 78899999...9*****************************7 PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   5.6   6.1e-08   6.8e-05       1      19 []     172     191 ..     172     191 .. 1.00
   2 ?   -3.2   0.4       8.8   9.9e+03       1       4 [.     262     265 ..     261     265 .. 0.71

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 6.1e-08
   zf_CCCH_4   1 Ckfflq.GtCkkGdkCrFaH 19 
                 Ck ++q G C +Gd+C+++H
  KHJ33971.1 172 CKDYKQtGFCGFGDSCKYLH 191
                 ******************** PP

  == domain 2  score: -3.2 bits;  conditional E-value: 8.8
   zf_CCCH_4   1 Ckff 4  
                 C+++
  KHJ33971.1 262 CRHY 265
                 7776 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   5.9     5e-07   0.00056       1      38 [.     247     286 ..     247     290 .. 0.90

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 5e-07
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCfdsk..dlssCPlCqr 38 
                  C+lC+e+ +++++  C H +C++C  +   +++sC  C +
   KHJ33971.1 247 CILCKEKYQNPVVTKCRHYFCESCALKRykKYQSCAACGS 286
                  ************************877656999**99975 PP

>> zf-RING_10  zinc RING finger of MSL2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   5.2   1.5e-06    0.0016       2      45 ..     246     286 ..     245     304 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 1.5e-06
  zf-RING_10   2 sCvvCckLLvdPlepkekeCqHyvCrlCvgkkkklkpsCsqCkd 45 
                 +C+ C +  ++P+     +C Hy C +C  k+ k   sC+ C +
  KHJ33971.1 246 ACILCKEKYQNPVVT---KCRHYFCESCALKRYKKYQSCAACGS 286
                 799999988888765...9***********************84 PP

>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   1.9   1.7e-06    0.0019       2      21 ..     171     191 ..     170     192 .. 0.93
   2 ?    2.5   2.8      0.12   1.3e+02       3      11 ..     262     270 ..     261     271 .. 0.95

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 1.7e-06
   zf-CCCH_4   2 lCpyfa.kGsCrfGdnCrFsH 21 
                 +C+ +  +G C fGd C+++H
  KHJ33971.1 171 VCKDYKqTGFCGFGDSCKYLH 191
                 799999899************ PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.12
   zf-CCCH_4   3 CpyfakGsC 11 
                 C++++++sC
  KHJ33971.1 262 CRHYFCESC 270
                 ********* PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   7.4   4.7e-06    0.0053       2      43 ..     246     284 ..     245     285 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 4.7e-06
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssstCPlC 43 
                  C +C e+++   ++++++C+H f+++C+ +  ++ ++C +C
  KHJ33971.1 246 ACILCKEKYQ---NPVVTKCRHYFCESCALKRYKKYQSCAAC 284
                 5999*98885...444455*********9887888888*999 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   9.1   8.8e-05     0.098       1      42 []     247     284 ..     247     285 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 8.8e-05
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 C  C +  ++Pv  +C h fC sC  +  k+ ++    C  C
  KHJ33971.1 247 CILCKEKYQNPVVTKCRHYFCESCALKRYKKYQS----CAAC 284
                 889*********************9988888765....4444 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   4.9   0.00045       0.5      13      54 ..     246     284 ..     240     285 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00045
     zf-rbx1  13 acieckapgdeecpvvlGeCgHaFHlhCiskWlktrkvCPlc 54 
                 aci ck++ ++  p v+ +C+H F   C  k  k+ ++C  c
  KHJ33971.1 246 ACILCKEKYQN--P-VVTKCRHYFCESCALKRYKKYQSCAAC 284
                 79999999998..5.555*********************888 PP

>> zf-Nse  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.9   0.00086      0.96       8      42 ..     241     274 ..     236     287 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00086
                 SBXXSB-TTTSSB-SSEEEESSS--EEEHHHHHHH CS
      zf-Nse   8 erislkCPltlqpfeePvtskkCpHvFEreaIlel 42 
                 e+i++ C l ++++++Pv  +kC+H F ++  l+ 
  KHJ33971.1 241 ENIPFACILCKEKYQNPVV-TKCRHYFCESCALKR 274
                 679999************8.78*****66654443 PP

>> DUF1770  Fungal protein of unknown function (DUF1770)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.5       1.3   1.4e+03      40      66 ..      30      55 ..       5      60 .. 0.51
   2 ?   13.4   1.1   0.00011      0.12       5      50 ..      60     106 ..      56     155 .. 0.77
   3 ?   -0.1   0.1       1.6   1.8e+03      45      60 ..     225     247 ..     193     263 .. 0.51

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 1.3
     DUF1770 40 ddesldskeeddeedeipysvirpvsr 66
                + +s ds++++ +++ei+++v r  +r
  KHJ33971.1 30 KISSSDSDSDNGSDEEIDIKVKRH-KR 55
                333333444445566777776555.34 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 0.00011
     DUF1770   5 qtasirrapspehdlnp.staaskkepvtleekskkddesldskeed 50 
                  tasi++ p ++ d++p + aa+++e+++ ++ ++k+++  d++e++
  KHJ33971.1  60 ITASIKSTPASTIDVEPtRYAAERNETIKSSNDATKSSNWFDEHEVN 106
                 59***************999********9999888866666655444 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 1.6
     DUF1770  45 dskeed..deed.....eipysv 60 
                 + k +d  +e+d     +ip+ +
  KHJ33971.1 225 NRKVDDeeSEDDetmleNIPFAC 247
                 21111111222212233555554 PP

>> zf-CCCH_2  RNA-binding, Nab2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.9   0.00026       0.3       2      17 ..     172     191 ..     172     192 .. 0.96

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00026
   zf-CCCH_2   2 Crffpn...C.tnpkCpFaH 17 
                 C+++     C ++++C++ H
  KHJ33971.1 172 CKDYKQtgfCgFGDSCKYLH 191
                 9******************* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1510  (0.0842211); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2350.01
//
Query:       KHJ33972.1  [L=632]
Description: putative cleft lip and palate associated transmembrane protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.1e-146  487.8   0.7   3.8e-146  487.5   0.7    1.1  1  CLPTM1    Cleft lip and palate transmembrane protein 1 (CLPTM
  ------ inclusion threshold ------
      0.034   14.5   0.6      0.092   13.1   0.6    1.7  1  DUF1772   Domain of unknown function (DUF1772)
        0.9    9.8   4.4       0.29   11.4   0.6    2.1  2  DUF4293   Domain of unknown function (DUF4293)
        3.1    8.1   8.7        4.9    7.4   0.3    3.4  3  DUF996    Protein of unknown function (DUF996)


Domain annotation for each model (and alignments):
>> CLPTM1  Cleft lip and palate transmembrane protein 1 (CLPTM1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  487.5   0.7  8.4e-150  3.8e-146       2     429 .]      18     500 ..      17     500 .. 0.92

  Alignments for each domain:
  == domain 1  score: 487.5 bits;  conditional E-value: 8.4e-150
      CLPTM1   2 slllrvlllyllvslvt..lsgk............................ansppceeepsees.......tpkclapllkegekldlsvyvseseef 63 
                 +++++ +l+ + +++++  l++k                             ++ ++       +       + +++ p++++++ ld+ +++s++   
  KHJ33972.1  18 KSIVQGFLIMIGIQFIIgqLTEKnsnsdisydvlgdktgvkgdasgikpqfPSPRDA-------NegvefnaIANQIVPIWPKNTLLDVVITISPNFIP 109
                 678888888888888886544447788888888888777777776444432112222.......13455666999*********************999 PP

      CLPTM1  64 ekl..kse.eklvlkeknlkygdweesreveltiklpkevqnNgtlyahvfltksgssldpkdekydkksvvhktkqLtkylpkkkekktknLlkekee 159
                 e++  + + e++vl+e+++ +gd++e+re+++ +++p e+qnN tl+ ++f+  +g++ldp++++y++++++h+t +L+++l++k+ +k+knLl+ +++
  KHJ33972.1 110 EPIskT-QkERVVLNETAFRFGDFNEEREIDILFDVPGELQNNSTLWGQFFIGINGENLDPSTPSYNPERSFHFTWPLSQFLTQKRSRKEKNLLTRSSQ 207
                 999633.359*************************************************************************************9999 PP

      CLPTM1 160 eeeee..ekeekpvivsywkpnltlslvsdktalskeqlppevaeyikleetg........gqYlPilfvnefwqlkkdlveinetvkelpLtitlspl 248
                 +ee    e + k+ ivs+++pn+t+s+++d++ +s  +++p++++y++l++++        g Y+P+lf+n+fwqlk++++++n+tv++lpL+i+l+++
  KHJ33972.1 208 NEELIeeEFPLKSKIVSHYHPNFTMSFIPDTGIISFPSIHPAMRKYFHLQSSNkndgtfsnGRYYPVLFINTFWQLKSHMTPLNSTVNRLPLHIKLNNI 306
                 888763355666779***********************************9999********************************************* PP

      CLPTM1 249 slwklqlyasmeeslkqqakl.........gfsekeideiKeilldtnpyLLalTivVsllHsvfefLAFknDisfWrkkksleGlSvrsilanvfsql 338
                 ++wk+++++s+++  kq+ak           ++++e+++iKe+lldtnpyLLa+T+vVs++H++fe+LAFk+Dis++r+kk+++G+S+rsil nvf+q+
  KHJ33972.1 307 ANWKFSILSSLDHGAKQAAKAsaqgitspgAGDGSEFEMIKEVLLDTNPYLLATTVVVSIIHMIFEILAFKSDISHYRNKKNNVGISIRSILGNVFMQA 405
                 *******************999*******87899***************************************************************** PP

      CLPTM1 339 vifLYLlDn..eTSwlilisqgiGllielWKitkvvkvrlseegslp..rlkfedkeklsesekkTkeYDeiAfkYLsyvlvPlligyaiYSLlY 429
                 vi+LYLlDn  +TSw+il+sqg+G+l+elWKit++v++ +++++++   +++fedk+ ls  e+kTkeYD++AfkY++++++Pll++ya YSL Y
  KHJ33972.1 406 VILLYLLDNneNTSWMILVSQGMGILLELWKITTIVNICIRPSDNIMgfKIAFEDKHVLSVIEEKTKEYDAMAFKYMYMIAIPLLLAYAGYSLAY 500
                 ******************************************8885549********************************************99 PP

>> DUF1772  Domain of unknown function (DUF1772)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.6   2.1e-05     0.092      37      88 ..     480     530 ..     464     558 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2.1e-05
     DUF1772  37 avfpplallsalafa.ylaaraasrgarllylaaaallllsivpyTllvmvP.t 88 
                 + + ++a+  +la+a y       ++++  +  + a l+ s+  y +l+mvP +
  KHJ33972.1 480 KYMYMIAIPLLLAYAgYSL-AYETHRSWYSF--VIATLVGSVYAYGFLMMVPsL 530
                 4455788899999995555.34444444444..456677889********9952 PP

>> DUF4293  Domain of unknown function (DUF4293)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.6   6.5e-05      0.29      46     133 ..     353     441 ..     326     445 .. 0.79
   2 ?   -1.6   0.2      0.63   2.8e+03      81     106 ..     506     533 ..     458     561 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 6.5e-05
     DUF4293  46 aetsvnvsvwvlvilllliailal.iaIflyknRklQlrlclinllllvllyvllallllvnkanaaaeslgesslkiglilplialil 133
                 ++ +   +++v+ i+ ++  ila+  +I  y+n+k  + + + ++l +v++ ++++l+ll n++n+++  l ++ ++i l l  i+ i+
  KHJ33972.1 353 TNPYLLATTVVVSIIHMIFEILAFkSDISHYRNKKNNVGISIRSILGNVFMQAVILLYLLDNNENTSWMILVSQGMGILLELWKITTIV 441
                 445566778888899999999998357******************************99999999999888666666666555555555 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.63
     DUF4293  81 Qlrlclinllllvllyvllal..lllvn 106
                  + +++ +l+  v  y++l++  +l++n
  KHJ33972.1 506 WYSFVIATLVGSVYAYGFLMMvpSLYIN 533
                 3445555555555555555554544444 PP

>> DUF996  Protein of unknown function (DUF996)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.17   7.5e+02      69     103 ..      16      56 ..       4      59 .. 0.53
   2 ?    7.4   0.3    0.0011       4.9      64     121 ..     352     409 ..     306     412 .. 0.81
   3 ?    2.2   1.8     0.047   2.1e+02      13     111 ..     493     605 ..     476     608 .. 0.52

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.17
      DUF996  69 lilllllvl.iiayvlliisavflkks.....yellgkrtg 103
                 +i  ++  + i++ + +ii  +  k+s     y+ lg++tg
  KHJ33972.1  16 MIKSIVQGFlIMIGIQFIIGQLTEKNSnsdisYDVLGDKTG 56 
                 34444444424444667777776666422222555555555 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0011
      DUF996  64 eeaaslilllllvliiayvlliisavflkksyellgkrtgvklFetagllyfiGaiLt 121
                 +++++l++++++v ii +++ i++     + y++ ++ +g+++ ++ g++++ + iL+
  KHJ33972.1 352 DTNPYLLATTVVVSIIHMIFEILAFKSDISHYRNKKNNVGISIRSILGNVFMQAVILL 409
                 3334488999999999999999999999999999999999999999999999888886 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.047
      DUF996  13 lkeiskavndekifsnaliafilsiialvva.....ilalllvlgalatalelpgleeaas...............lilllllvl..iiayvlliisav 89 
                     s a++  + + +++ia++++ +  + +      l +   l ++a++                          ++++ +  l  ++++   +i  +
  KHJ33972.1 493 YAGYSLAYETHRSWYSFVIATLVGSVYAYGFlmmvpSLYINYRLKSVAHMPA--------KamtykflntfiddlfAFTIKMPTLhrLATFRDDVIFFI 583
                 4444555555555555555544444422222233332222222222222222........122334444666676644444444444566666677777 PP

      DUF996  90 flkksyellgkrtgvklFetag 111
                 +l++s++   ++t ++ F ++g
  KHJ33972.1 584 YLYQSWKYKIDYTRINEFGQGG 605
                 7777777777777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (632 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       681  (0.0379832); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 4687.60
//
Query:       KHJ33973.1  [L=821]
Description: putative aminodeoxychorismate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-68  231.2   0.0    1.6e-40  139.4   0.0    2.2  2  Chorismate_bind  chorismate binding enzyme
    4.2e-25   88.6   0.0    2.6e-23   82.8   0.0    2.3  1  GATase           Glutamine amidotransferase class-I
    7.8e-17   61.8   0.0    6.5e-16   58.8   0.0    2.5  3  Anth_synt_I_N    Anthranilate synthase component I, N termina
    0.00055   19.8   0.8      0.025   14.3   0.1    2.3  2  Peptidase_C26    Peptidase C26
  ------ inclusion threshold ------
      0.035   14.5   0.0          1    9.8   0.1    2.5  2  GlcV_C_terminal  Glucose ABC transporter C-terminal domain


Domain annotation for each model (and alignments):
>> Chorismate_bind  chorismate binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.4   0.0   4.3e-44   1.6e-40       2     166 ..     522     685 ..     521     692 .. 0.96
   2 !   89.7   0.0   6.2e-29   2.2e-25     158     258 .]     698     811 ..     696     811 .. 0.93

  Alignments for each domain:
  == domain 1  score: 139.4 bits;  conditional E-value: 4.3e-44
                      HCHHHHHHHHHHHHHHTTS-SEEEEEEEEEECESS-B-HHHHHHHHHCTBSSSEEEEEEETTEEEEEEESSEEEEEETTSEEEEECEEEEEEHS CS
  Chorismate_bind   2 redYaeavekvkeeiragdlykvvlsrrlkaeleaavdplalyralrarnpapysflleledsellgaSPElllkveggrrietepiaGTrarg 95 
                      + dY+++v +++++i+ag++y+++l+ ++ ++++++ +++++y+ lr  +pap++ +l+l+  ++++aSPE +lk+++ + +e +p++GT +++
       KHJ33973.1 522 ESDYQNKVLACQSHIQAGESYELCLTDQTIIQIQQPKSAWDVYKMLRLSQPAPFASYLRLGPVTFISASPEQFLKWNEIGDCELRPMKGTVKKS 615
                      679**************************************************************************88************998 PP

                      SSHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCBSCCEEEEECCEEEEEETTEEEEEEEEEEEESTT CS
  Chorismate_bind  96 ktpeedealeeelledeKeraEhlmivdlirndLgkvakpgsvkvpelfkverysevlhlvstiegelked 166
                      +t  +  ++++++l+++Ke+aE+lmivdl+r+dL+ ++ +g+v+vp+l+ +e+y++v+++ s i+g++++ 
       KHJ33973.1 616 STI-TSTTEAASVLHKPKEIAENLMIVDLARHDLHGICGSGNVTVPKLMVIEEYASVFQMISVISGKINSP 685
                      888.57777899*******************************************************9875 PP

  == domain 2  score: 89.7 bits;  conditional E-value: 6.2e-29
                      EEEE.EESTT--HHHHHHHCSS-CCCSEESHHHHHHHHHHHSSS--TTTTSEEEEEETTS-EEEEEE-SEEEE.ET...........TEEEEEE CS
  Chorismate_bind 158 tieg.elkedvslldllkalfPtgavtGaPkkrameiidelEearRgvYaGavgyldadgeaelavvIRtavv.kd...........kelrlga 238
                      t+eg e++ +++ ld+l + +P+g++tGaPkkr++ei++e+E ++R +Y+G+vgyld+ g+++++v+IR+++  +d            ++++ga
       KHJ33973.1 698 TVEGsEIRGSHTGLDVLVSSLPPGSMTGAPKKRSCEILKEIEGKERSLYSGVVGYLDVRGRGDWSVNIRCLFKwDDesivtksgetaWKFYIGA 791
                      5666466777899************************************************************76689*******9966***** PP

                      EEEEETT--HHHHHHHHHHH CS
  Chorismate_bind 239 GaGIvadSdpeaEyeEtlaK 258
                      G++++  S++ +E eE+laK
       KHJ33973.1 792 GGAVTSLSTAFEEKEEMLAK 811
                      ******************98 PP

>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.8   0.0   7.4e-27   2.6e-23       2     185 ..       9     233 ..       8     238 .. 0.76

  Alignments for each domain:
  == domain 1  score: 82.8 bits;  conditional E-value: 7.4e-27
                 EEESSTSTHHHHHHHHHH.TT-EEEEEETTSHHHHHHH.....THHSTSEEEEEEESSCTTTTTHHHHHHHHCT....STS-EEEETHHHHHHHHHTTT CS
      GATase   2 liDnydsvtenlvhalve.lgvkvevvpidasaeeile.....llknpdgilvsgGpgspgvegkieaikeare....nkiPiLGICLGmQllaiefgr 90 
                 +iD+yds+++n++  l   l+v+v  v+id + +   +     +l n+ +++  +Gpgsp+ +g + +ik++ +    + +P+LGICLG+Q l++efg+
  KHJ33973.1   9 FIDAYDSFSNNIISLLETtLNVSVRTVKIDNPVLLASKnalhtELRNYVAVICGPGPGSPENKGDVGLIKQIWNlnneEMLPVLGICLGFQSLCLEFGA 107
                 69************9975267999999999987766444554569****************99999999999887666789****************** PP

                 EEEEEECEEEEEEEEEEEETTT....CGGTTTTSEEEEEEEEEEEEESG.............................CHHHTTEEEEEEEETTE.... CS
      GATase  91 kvvkekekehhggtmrlgddet....allyglknevierhrHryevnpk.............................elepaglevtaksedde.... 152
                 ++ + k  ++hg   +++++++    + + ++  e++++ + +++v+                               e   ++      s++++    
  KHJ33973.1 108 SIQRLK-GPQHGIVRKITHNGSlndtKSIFNEVGEIYATLYQSLCVDIGhssmsrgeqekkkwqptdqcpnlvplawvE---SD-----ISKSNNsgik 197
                 ******.9***********998****44555555566666666666544555555556677777777777444553221...22.....2221113344 PP

                 ...EEEEEEEETTTEEEESSBTTSTTSTTHHHHHHH CS
      GATase 153 ...elmeiiekknpfvgvQFHPEststpegpellfn 185
                     l++i++ ++pf+++Q+HPEs+ t ++++ l +
  KHJ33973.1 198 dekILVGIQHANYPFWAIQYHPESICTNNESKKLIK 233
                 4459***********************998877655 PP

>> Anth_synt_I_N  Anthranilate synthase component I, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.59   2.1e+03       3      40 ..      25      63 ..      24      91 .. 0.81
   2 !   58.8   0.0   1.8e-19   6.5e-16       7     142 .]     311     464 ..     307     464 .. 0.72
   3 ?   -2.9   0.0         2   7.3e+03      87      98 ..     742     753 ..     731     753 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.59
  Anth_synt_I_N  3 ltplsvylklaeeehkflLeSaenegge.grySfigldp 40
                   +t+l+v  +  + ++++lL S +  + e  +y  +++ p
     KHJ33973.1 25 ETTLNVSVRTVKIDNPVLLASKNALHTElRNYVAVICGP 63
                   678888888888899******987777778888887777 PP

  == domain 2  score: 58.8 bits;  conditional E-value: 1.8e-19
  Anth_synt_I_N   7 svylklaeee.hkflLeSaenegge...grySfigldpfle...................lkskngevevegpegeeleeeepldalrellerfrs 79 
                     +++++++ + + +lLeS++ ++++   gr+S+igld  ++                   ++s+n+ ++++     e++ ee+++++   le +++
     KHJ33973.1 311 DIVERVQDINaEHILLESSNASQSSsvkGRFSIIGLDI-GSctrieyqvgqnffkivksqVDSDNSTIRISS----EQSCEEVWNYIATQLEMVKD 401
                    5677788878899******988888999*********9.333455555555554443333334444444444....66666799998888888885 PP

  Anth_synt_I_N  80 aedseptelpfvgGlvGylgYDl.vreie.klpksakddlnlpdarlilydtlivfDhkerrlyl 142
                     +   + e  f gG++Gy +Y+l  + i  k + +++++++ pd++l+++++ iv+Dh ++++++
     KHJ33973.1 402 CSG--NIESIFWGGFMGYTTYELgLERIGiKPDFKHINNRSRPDLCLVWVNSSIVIDHANNQIFI 464
                    533..45666*************555554343355899999*********************986 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 2
  Anth_synt_I_N  87 elpfvgGlvGyl 98 
                    e ++++G+vGyl
     KHJ33973.1 742 ERSLYSGVVGYL 753
                    45689******6 PP

>> Peptidase_C26  Peptidase C26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.1     7e-06     0.025     101     143 ..      84     126 ..      74     159 .. 0.69
   2 ?    3.7   0.1     0.013        46     202     216 .]     206     220 ..     198     220 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 7e-06
  Peptidase_C26 101 alergvPilgiCrGlqllnvalGGtlyqdieeqsgltdhrehe 143
                     +e+ +P+lgiC+G+q l   +G ++ +    q+g+++   h+
     KHJ33973.1  84 NNEEMLPVLGICLGFQSLCLEFGASIQRLKGPQHGIVRKITHN 126
                    568899************9999988755433355555555555 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.013
  Peptidase_C26 202 eeakafvlgvQwHPE 216
                    ++a+++++++Q+HPE
     KHJ33973.1 206 QHANYPFWAIQYHPE 220
                    456799********9 PP

>> GlcV_C_terminal  Glucose ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   0.00029         1      15      41 ..     355     384 ..     346     392 .. 0.84
   2 ?    1.6   0.0      0.11   3.8e+02      15      52 ..     508     546 ..     502     552 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00029
                      EEETT..EEEEEEEETTS--.-EEEEESS- CS
  GlcV_C_terminal  15 sYqaG..iFkitvspidsee.eivvnseep 41 
                       Yq G  +Fki+ s +ds++  i + se+ 
       KHJ33973.1 355 EYQVGqnFFKIVKSQVDSDNsTIRISSEQS 384
                      68888446************99*****986 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.11
                      EEETTEEEEEEEETTS--.-EEEEESS---TT-EEEEEE CS
  GlcV_C_terminal  15 sYqaGiFkitvspidsee.eivvnseepikaGeevllyv 52 
                      s++   Fk ++ p +s+  + v   + +i+aGe  +l  
       KHJ33973.1 508 SFAKSRFKLILPPDESDYqNKVLACQSHIQAGESYELCL 546
                      677778*******9999966777889******9888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (821 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.42
# Mc/sec: 5814.76
//
Query:       KHJ33974.1  [L=1046]
Description: putative nonsense-mediated mrna decay protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-14   53.4   2.8    4.2e-13   49.0   0.0    3.8  4  IBN_N          Importin-beta N-terminal domain
    1.5e-06   27.3   0.1    4.8e-06   25.6   0.1    1.9  1  Cse1           Cse1
     0.0019   16.8   1.8      0.074   11.5   0.0    3.0  4  CAS_CSE1       CAS/CSE protein, C-terminus
     0.0027   18.1   1.3        1.1    9.7   0.3    3.4  2  HEAT_2         HEAT repeats
  ------ inclusion threshold ------
      0.023   14.8   4.9          3    7.9   0.1    4.8  6  Xpo1           Exportin 1-like protein
      0.045   14.3   2.0       0.38   11.4   0.1    3.6  5  Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
      0.052   13.7   0.1       0.33   11.2   0.1    2.5  1  RTP1_C1        Required for nuclear transport of RNA pol II C
      0.059   13.4   0.4       0.42   10.6   0.2    2.6  2  Cnd1           non-SMC mitotic condensation complex subunit 1
      0.078   12.9   0.3       0.43   10.5   0.0    2.5  2  GRIP           GRIP domain
      0.084   13.0   0.0       0.34   11.1   0.0    1.9  2  MukF_C         MukF C-terminal domain
       0.16   11.7   0.3       0.59    9.8   0.3    2.0  1  DCB            Dimerisation and cyclophilin-binding domain of
        3.7    8.1   8.4         23    5.6   0.0    5.3  5  HEAT_EZ        HEAT-like repeat


Domain annotation for each model (and alignments):
>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   0.0   2.8e-16   4.2e-13       1      73 [.      24      99 ..      24     100 .. 0.90
   2 ?   -2.5   0.0       3.5   5.2e+03      36      64 ..     415     437 ..     412     447 .. 0.79
   3 ?    1.1   0.1      0.25   3.7e+02      20      46 ..     511     538 ..     495     558 .. 0.65
   4 ?   -0.1   0.1      0.58   8.7e+02       4      26 ..     991    1014 ..     989    1016 .. 0.82

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 2.8e-16
                HHHHHHHHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGG....SCCCHC...GSXHHHHHHHHHHHHHHHH CS
       IBN_N  1 AekqLkqlekqpgflsallqilanseselevRqlAalyLknlitkhWs....deeekq...slpseekeqIrnnllnllg 73
                Ae  Lk +e++pgf  al+ il++++ + ++R++ a+yLkn +++ Ws    ++   +   ++p++ek+ +r+ ll ll+
  KHJ33974.1 24 AELELKAAEEHPGFTDALVDILQTEQEP-SIRMSTAVYLKNRVNRAWSidsnSS---HqskPIPDDEKQRFRERLLPLLA 99
                8999************************.*******************864433...1466***************9997 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 3.5
                 HHHHHHHHHHHGGSCCCHCGSXHHHHHHH CS
       IBN_N  36 alyLknlitkhWsdeeekqslpseekeqI 64 
                 +l++ n+i + +       + ++e k+++
  KHJ33974.1 415 ILTFVNKIVSEYE------TADDEKKNHV 437
                 689999***9999......7777777765 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.25
                 HHHHCTTSH.HHHHHHHHHHHHHHHHHH CS
       IBN_N  20 qilansese.levRqlAalyLknlitkh 46 
                  il   +++ l+vR+ Aal L+ li++ 
  KHJ33974.1 511 KILDCMADPdLPVRVEAALALQPLIRHD 538
                 555555555468************9987 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.58
                  HHHHHHC.STCHHHHHHHHHHCTT CS
       IBN_N    4 qLkqlek.qpgflsallqilanse 26  
                  +L +l++ qp+   +l+ il+ +e
  KHJ33974.1  991 ALLKLQQeQPQLYESLIKILTAEE 1014
                  56777777************9765 PP

>> Cse1  Cse1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.1   3.2e-09   4.8e-06     162     282 ..     329     449 ..     284     513 .. 0.80

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 3.2e-09
                 HHHHHHHHHTSHHHHTTT-S.HHHHHHHHHHTHHHHHS--HHHHHHHHHSHHHHHHHHSCSS-.--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Cse1 162 alkFltsvakvkkyaelFen.eevlkeiiekvvlpnvtlResDeElFEdepieyirrDlEGsd.vdtRrraatdllkeLkekfeakvtevvleyvekll 258
                 +l+Fl    k+   +e++++ +  l+++i +v+ p ++l ++D+E F+ +p+ey++  l+  +   +   aat +l +L++    k t ++l+ v+k++
  KHJ33974.1 329 TLAFLDECVKS---KEMWNHlKPHLDSLITHVIFPIMCLSSDDIEKFDTDPEEYLHHKLNYFEeASSPDVAATSFLVTLTKMRR-KHTFTILTFVNKIV 423
                 45555544444...44444324579**********************************975515667889*******987655.5566678999**** PP

                 HHHHH..-TTT-HHHHHHHHHHHHHH CS
        Cse1 259 ekyke..npsanWkkkdlaiyLvtsl 282
                 ++y++  ++++n  +k+ a+ ++ +l
  KHJ33974.1 424 SEYETadDEKKNHVAKEGALRMIGTL 449
                 99986225667777787777776655 PP

>> CAS_CSE1  CAS/CSE protein, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.016        24     116     164 ..     103     151 ..      97     157 .. 0.85
   2 ?   -2.7   0.1         1   1.6e+03     195     196 ..     543     544 ..     497     588 .. 0.47
   3 ?   -3.6   0.0       1.9   2.8e+03     110     145 ..     645     680 ..     634     756 .. 0.67
   4 !   11.5   0.0   4.9e-05     0.074     306     372 ..     837     904 ..     765     915 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.016
    CAS_CSE1 116 skleeaLfpvfqaiLqedvtEFvPYvfQllaaLleanksetlpesykal 164
                 s++ ++L pv+q+ L+ d  E  P    + a+Ll++n+  ++    + l
  KHJ33974.1 103 SQIRKQLIPVLQKSLHFDFPEKWPSFVTITAQLLNTNEVPSIIAGLQCL 151
                 6899*********************************977776655555 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1
    CAS_CSE1 195 sq 196
                 s 
  KHJ33974.1 543 SM 544
                 22 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 1.9
    CAS_CSE1 110 adpaavskleeaLfpvfqaiLqedvtEFvPYvfQll 145
                 + p+++ ++e+ L pv++  L++ + +    vf ++
  KHJ33974.1 645 STPDVLLHMESILMPVIKVTLENKLYDLYNEVFEII 680
                 555555666666666666666665555555555554 PP

  == domain 4  score: 11.5 bits;  conditional E-value: 4.9e-05
    CAS_CSE1 306 vilpelqklarpldrKlavvsltkllaesealldr.ykklwaklleallkllekpeeeaaadedeiie 372
                 ++ +++  ++r  d+Kl++ ++  ll  s+  +    +++w++ll+ +++l++  +  ++++e+++ e
  KHJ33974.1 837 LWFSSIDSFPRVHDKKLSIAAIVSLLMLSPDHVPIsVQQGWPRLLQGIIRLFQTLPAATKNREEALRE 904
                 67788999******************99988887769****************999888866655544 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.3   0.00071       1.1      10      56 ..      14      62 ..       6     114 .. 0.76
   2 ?    5.3   0.0     0.017        26      15      56 ..     482     532 ..     476     568 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00071
      HEAT_2 10 ndpdpevrraairaLgri.gnpealpaLvelled.edpavRraaaeaLg 56
                 d+d +vrr+a  +L     +p   +aLv++l++ ++p +R+  a +L 
  KHJ33974.1 14 LDADADVRRRAELELKAAeEHPGFTDALVDILQTeQEPSIRMSTAVYLK 62
                3899999999999999763678999999999965156999999988885 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.017
      HEAT_2  15 evrraairaLg.....rignp....ealpaLvellededpavRraaaeaLg 56 
                 ++r++a+ +       ++++     ++ + +++++ d+d  vR +aa aL 
  KHJ33974.1 482 YLRARACNTVEkfeqlEFKDSnnllTIYRKILDCMADPDLPVRVEAALALQ 532
                 67888888888555443333355567788999999999999*****99996 PP

>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.1     0.002         3       1     109 [.     102     204 ..     102     236 .. 0.70
   2 ?   -3.2   0.0       5.3   7.9e+03     103     125 ..     303     322 ..     287     340 .. 0.53
   3 ?   -3.7   0.0       7.6   1.1e+04      80     101 ..     412     436 ..     405     447 .. 0.64
   4 ?    1.2   0.1      0.24   3.6e+02      70     106 ..     538     573 ..     533     613 .. 0.58
   5 ?    3.4   0.0     0.049        73      99     139 ..     708     748 ..     661     763 .. 0.74
   6 ?   -2.9   0.0       4.3   6.4e+03      21      42 ..     874     895 ..     869     899 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.002
                 THHHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCT......HHHHHHHHHHHHHHHHHHHTSHTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Xpo1   1 pkflrnklaealaelflqeypnnWpsffddllsllsss.....psglelllriLkvlpeEiadfsrskleqerrndlkdllrsnvqkilelllqileqs 94 
                 p+ +r++l  +l + +  ++p++Wpsf++   +ll+++      +gl++ll +++v+   +++          r+d+ +  ++ ++++le+ + ++++ 
  KHJ33974.1 102 PSQIRKQLIPVLQKSLHFDFPEKWPSFVTITAQLLNTNevpsiIAGLQCLLALCRVFRFKTGE---------SRSDFDKIVTATFPRLLEIGQGMMNET 191
                 578999999999999**********************98777766777777777766543333.........344444555555555555554444444 PP

                 HHCCHHHHHHHHHHH CS
        Xpo1  95 qskkqsselveavLk 109
                 +++    e+++ vLk
  KHJ33974.1 192 SEEV--GEMLHTVLK 204
                 4433..444444444 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 5.3
                 HHHHHHHHHHHHTTTS-HHHHHT CS
        Xpo1 103 lveavLkclsswvswidiglivn 125
                 +++  L+ +++   w++ +  ++
  KHJ33974.1 303 ILKGYLQQIEK---WVERTIWLS 322
                 33333333333...444444444 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 7.6
                 HHHHHHHHHHHHHHHHHCC...HHH CS
        Xpo1  80 vqkilelllqileqsqskk...qss 101
                 + +il+++ +i++++++++   +++
  KHJ33974.1 412 TFTILTFVNKIVSEYETADdekKNH 436
                 5678888888888888877554443 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.24
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH CS
        Xpo1  70 ndlkdllrsnvqkilelllqileqsqskkqsselvea 106
                   +++ +++n+++i++ ll++ ++ + + + s + e 
  KHJ33974.1 538 DVIRTSMQQNIPQIMQQLLKLANEVDVD-ALSNVMED 573
                 5577777777777777777776665544.24444444 PP

  == domain 5  score: 3.4 bits;  conditional E-value: 0.049
                 HHHHHHHHHHHHHHHHTTTS-HHHHHTSCHHHHHHHHCCSC CS
        Xpo1  99 qsselveavLkclsswvswidiglivnnpllnllfqlLsdp 139
                   +  +e +L +l ++v+     li n+++l+++f+++sd 
  KHJ33974.1 708 GAELYLEDMLPALDNFVQYGAPHLIENPQYLEAIFSMVSDM 748
                 557778999***************************99654 PP

  == domain 6  score: -2.9 bits;  conditional E-value: 4.3
                 TTTSTTHHHHHHHHHCT.HHHH CS
        Xpo1  21 pnnWpsffddllsllssspsgl 42 
                 ++ Wp +++ +++l+++ p+++
  KHJ33974.1 874 QQGWPRLLQGIIRLFQTLPAAT 895
                 578***********99977665 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00025      0.38      23      83 ..     503     565 ..     479     572 .. 0.87
   2 ?   -3.1   0.0       8.3   1.2e+04      11      40 ..     583     612 ..     580     616 .. 0.76
   3 ?   -3.3   0.0       9.4   1.4e+04      32      59 ..     660     665 ..     639     685 .. 0.54
   4 ?   -1.9   0.0       3.5   5.2e+03      64      81 ..     736     753 ..     733     756 .. 0.78
   5 ?   -3.0   0.0       7.8   1.2e+04      15      46 ..     771     802 ..     765     815 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00025
  Vac14_Fab1_bd  23 eyleeivkpvlkcfsDkdsrvRyyacEslyniak..vakgevlkllneifdalvklvaDsdes 83 
                    + l +i + +l+c+ D d  vR  a+ +l  +++  v+++++ +++ +i + l kl+ ++d +
     KHJ33974.1 503 NNLLTIYRKILDCMADPDLPVRVEAALALQPLIRhdVIRTSMQQNIPQIMQQLLKLANEVDVD 565
                    556689999********************999875589******************9988865 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 8.3
  Vac14_Fab1_bd  11 aavaialekkikeyleeivkpvlkcfsDkd 40 
                       a+al++++++   +i++ +l+  + +d
     KHJ33974.1 583 TPFALALSEQLRDTYLRIIRELLEKNEKHD 612
                    567899999999999999999988765544 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 9.4
  Vac14_Fab1_bd  32 vlkcfsDkdsrvRyyacEslyniakvak 59 
                    v                      +kv+ 
     KHJ33974.1 660 V----------------------IKVTL 665
                    3......................33322 PP

  == domain 4  score: -1.9 bits;  conditional E-value: 3.5
  Vac14_Fab1_bd  64 kllneifdalvklvaDsd 81 
                    ++l+ if++++ +++D++
     KHJ33974.1 736 QYLEAIFSMVSDMFSDTK 753
                    578888888888888874 PP

  == domain 5  score: -3.0 bits;  conditional E-value: 7.8
  Vac14_Fab1_bd  15 ialekkikeyleeivkpvlkcfsDkdsrvRyy 46 
                    ++l+ +i++y+  ++++ +++++ ++++ + y
     KHJ33974.1 771 LNLRGHIDQYVLAFIEIGMRMLTNNEAKSKAY 802
                    56777788888888888888888888876655 PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   0.00022      0.33       1      47 [.     509     557 ..     509     575 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00022
     RTP1_C1   1 lqealkdlqdpllpvrahglvlLrkliekkske..avldiekilkllle 47 
                 ++++l+ + dp lpvr+++ + L+ li++       +++i++i++ ll+
  KHJ33974.1 509 YRKILDCMADPDLPVRVEAALALQPLIRHDVIRtsMQQNIPQIMQQLLK 557
                 78999***********************997444466667777776665 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       2.1   3.1e+03      79     108 ..     401     430 ..     381     457 .. 0.60
   2 ?   10.6   0.2   0.00028      0.42      24      67 ..     510     556 ..     482     611 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2.1
        Cnd1  79 laalteiseksenaiynllpdiisklsdal 108
                 l  lt++ +k + +i++ + +i+s + +a 
  KHJ33974.1 401 LVTLTKMRRKHTFTILTFVNKIVSEYETAD 430
                 233444444444445555555555555432 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00028
        Cnd1  24 epLrkrLkDedpyVRktaaivvakLilndmvkekg...flselakll 67 
                  ++  ++ D+d  VR  aa+++  Li++d+++ +    + + +++ll
  KHJ33974.1 510 RKILDCMADPDLPVRVEAALALQPLIRHDVIRTSMqqnIPQIMQQLL 556
                 46667888999999999999999998888876433111333344444 PP

>> GRIP  GRIP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00029      0.43      14      38 ..      97     121 ..      94     125 .. 0.85
   2 ?   -2.7   0.0       3.9   5.9e+03      29      39 ..     857     867 ..     855     868 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00029
        GRIP  14 FLeskeaserkqLvpVlstlLkfsp 38 
                  L s++   rkqL+pVl+  L+f+ 
  KHJ33974.1  97 LLASSPSQIRKQLIPVLQKSLHFDF 121
                 688889999**************95 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 3.9
        GRIP  29 VlstlLkfspe 39 
                 ++ +lL +sp+
  KHJ33974.1 857 AIVSLLMLSPD 867
                 8899*****97 PP

>> MukF_C  MukF C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00022      0.34      93     135 ..     192     234 ..     168     242 .. 0.85
   2 ?   -2.1   0.0       2.5   3.7e+03      74      90 ..     565     581 ..     501     599 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00022
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
      MukF_C  93 pldlaevlrdylakyPksqhfdvarllvdqavrlGvaeedlsg 135
                 + +++e+l+  l++y ++  fd+a +l +q+v +G ++  l++
  KHJ33974.1 192 SEEVGEMLHTVLKTYKHATFFDLASILREQSVTIGWCSLFLQT 234
                 55899******************************98765555 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.5
                 XXXXXXXXXXXXXXXXX CS
      MukF_C  74 eqlaerieealavykek 90 
                 + l++ +e+ ++v+ ++
  KHJ33974.1 565 DALSNVMEDFVEVFATE 581
                 23344444444444443 PP

>> DCB  Dimerisation and cyclophilin-binding domain of Mon2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.3   0.00039      0.59      82     122 ..     530     570 ..     523     576 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00039
         DCB  82 slqrLisheviseeaiskiietlwkllelgveielkvLqtl 122
                 +lq Li h+vi+ +  ++i +++++ll+l+ e+++  L  +
  KHJ33974.1 530 ALQPLIRHDVIRTSMQQNIPQIMQQLLKLANEVDVDALSNV 570
                 79***************************999999888665 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1       2.1   3.1e+03      27      46 ..      92     107 ..      83     114 .. 0.66
   2 ?   -2.8   0.0       6.8     1e+04      23      37 ..     137     152 ..     132     152 .. 0.77
   3 ?    5.6   0.0     0.015        23       4      52 ..     484     531 ..     482     534 .. 0.79
   4 ?    2.5   0.0      0.15   2.2e+02      21      38 ..     543     560 ..     537     564 .. 0.88
   5 ?   -1.1   0.1         2   2.9e+03      22      38 ..     995    1011 ..     991    1019 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 2.1
     HEAT_EZ  27 peilpaLlalLnddsd.eVRa 46 
                 +++lp+L+     +s+  +R+
  KHJ33974.1  92 ERLLPLLA-----SSPsQIRK 107
                 45556665.....55526676 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 6.8
     HEAT_EZ  23 qp.lvpeilpaLlalL 37 
                 ++ +vp i++ L  lL
  KHJ33974.1 137 NTnEVPSIIAGLQCLL 152
                 55589******99776 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.015
     HEAT_EZ   4 RraAawaLGr....laggepellqplvpeilpaLlalLnddsd.eVRaaAagaL 52 
                 R+ A++++ +    l++  ++ l +   +il++++     d+d +VR  Aa aL
  KHJ33974.1 484 RARACNTV-EkfeqLEFKDSNNLLTIYRKILDCMA-----DPDlPVRVEAALAL 531
                 66677777.55666777777778889999******.....***999*****999 PP

  == domain 4  score: 2.5 bits;  conditional E-value: 0.15
     HEAT_EZ  21 llqplvpeilpaLlalLn 38 
                  +q+++p+i+ +Ll+l n
  KHJ33974.1 543 SMQQNIPQIMQQLLKLAN 560
                 5899**********9875 PP

  == domain 5  score: -1.1 bits;  conditional E-value: 2
     HEAT_EZ   22 lqplvpeilpaLlalLn 38  
                  lq+++p++   L++ L+
  KHJ33974.1  995 LQQEQPQLYESLIKILT 1011
                  899**********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1046 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       934  (0.0520944); expected 358.6 (0.02)
Passed bias filter:                      636  (0.0354733); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.87u 0.30s 00:00:01.17 Elapsed: 00:00:00.48
# Mc/sec: 6529.92
//
Query:       KHJ33975.1  [L=144]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1352  (0.0754086); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1055.82
//
Query:       KHJ33976.1  [L=560]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (560 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       843  (0.0470188); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 4157.39
//
Query:       KHJ33977.1  [L=1029]
Description: putative ef hand domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.3e-11   41.3  13.5      1e-05   24.7   0.9    3.7  4  EF-hand_1  EF hand
    1.7e-09   37.4  11.7    3.6e-09   36.3  11.7    1.6  1  ZZ         Zinc finger, ZZ type
    1.1e-08   34.2   6.8    0.00011   21.8   0.3    3.1  3  EF-hand_6  EF-hand domain
    1.2e-08   35.3   1.3     0.0016   18.9   0.2    3.7  3  EF-hand_7  EF-hand domain pair
    6.5e-05   22.7   3.8        0.1   12.4   0.0    3.4  3  EF-hand_8  EF-hand domain pair
     0.0005   19.4   8.4       0.23   11.0   0.3    3.6  3  EF-hand_5  EF hand
  ------ inclusion threshold ------
      0.018   15.4   0.2      0.066   13.6   0.2    1.9  1  DUF2865    Protein of unknown function (DUF2865)


Domain annotation for each model (and alignments):
>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.4   1.5e-08   3.9e-05       2      26 ..     293     317 ..     292     318 .. 0.93
   2 !   24.7   0.9   4.1e-09     1e-05       2      28 ..     326     352 ..     325     353 .. 0.94
   3 ?   -3.3   0.1       3.7   9.4e+03      12      19 ..     422     429 ..     421     430 .. 0.85
   4 ?    0.9   0.0      0.16     4e+02      15      23 ..     985     993 ..     985     994 .. 0.90

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 1.5e-08
                 HHHHHHHHTTTSSSEEEHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkell 26 
                 ++++F+ +D ++dG I f+Ef++ l
  KHJ33977.1 293 FDRMFSFYDSNKDGLIGFSEFIHGL 317
                 89*******************9987 PP

  == domain 2  score: 24.7 bits;  conditional E-value: 4.1e-09
                 HHHHHHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkellkk 28 
                 +k+iF+ +D DgdG++d+++f++++++
  KHJ33977.1 326 WKKIFEGYDIDGDGYVDRKDFLRIFRS 352
                 89**********************997 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 3.7
                 TSSSEEEH CS
   EF-hand_1  12 DgdGkIdf 19 
                 Dg G I+ 
  KHJ33977.1 422 DGKGVINE 429
                 9*****96 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.16
                 SEEEHHHHH CS
   EF-hand_1  15 GkIdfeEfk 23 
                 GkI+++Ef 
  KHJ33977.1 985 GKISYKEFE 993
                 9*******6 PP

>> ZZ  Zinc finger, ZZ type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.3  11.7   1.4e-12   3.6e-09       2      42 ..     149     190 ..     148     192 .. 0.88

  Alignments for each domain:
  == domain 1  score: 36.3 bits;  conditional E-value: 1.4e-12
                 SS-EE-TTT-S..EESSEEEESSSSS-EE-HHHHHH..H--- CS
          ZZ   2 hkkytCdgCseapligvRyhclrcsdYDLCqsCfst.hkagk 42 
                 h +  C+ C+  p+ g Ry+c+ c dYDLC sC+ +   +++
  KHJ33977.1 149 HRGCACNCCGMVPIRGIRYRCANCADYDLCESCEAQnVHTKT 190
                 67789******************************9544444 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.7   1.1e-05     0.027       2      26 ..     293     317 ..     293     321 .. 0.90
   2 !   21.8   0.3   4.3e-08   0.00011       2      27 ..     326     351 ..     325     359 .. 0.93
   3 ?   -2.7   0.0       3.2   8.3e+03      15      23 ..     985     993 ..     985     994 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.1e-05
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrkal 26 
                 +++ F  +D ++dG i ++E+++ l
  KHJ33977.1 293 FDRMFSFYDSNKDGLIGFSEFIHGL 317
                 5789*****************9976 PP

  == domain 2  score: 21.8 bits;  conditional E-value: 4.3e-08
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrkalr 27 
                 ++++F+ +D dgdG++d++++ +++r
  KHJ33977.1 326 WKKIFEGYDIDGDGYVDRKDFLRIFR 351
                 899*********************99 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 3.2
   EF-hand_6  15 GkidaeElr 23 
                 Gki+++E+ 
  KHJ33977.1 985 GKISYKEFE 993
                 99*****96 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00021      0.55      48      68 ..     295     315 ..     286     318 .. 0.78
   2 !   18.9   0.2   6.2e-07    0.0016       2      32 ..     324     354 ..     323     383 .. 0.84
   3 ?    1.8   0.0      0.14   3.5e+02      49      68 ..     974     994 ..     969    1010 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00021
   EF-hand_7  48 llfkefDtdkdGvisfdEFlk 68 
                 ++f   D++kdG i f+EF +
  KHJ33977.1 295 RMFSFYDSNKDGLIGFSEFIH 315
                 445555*************86 PP

  == domain 2  score: 18.9 bits;  conditional E-value: 6.2e-07
   EF-hand_7   2 eklkeaFkelDtdgdgyldkeellrllrkif 32 
                 +k k +F+ +D dgdgy+d+ ++lr++r+++
  KHJ33977.1 324 DKWKKIFEGYDIDGDGYVDRKDFLRIFRSFY 354
                 678899****************999999876 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.14
   EF-hand_7  49 lfkefDtdkd.GvisfdEFlk 68 
                 +++e   ++  G+is+ EF++
  KHJ33977.1 974 WIREAERRGGwGKISYKEFER 994
                 666666666668888888876 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   4.1e-05       0.1       6      49 ..     270     314 ..     268     318 .. 0.79
   2 !    9.4   0.3   0.00035      0.89      32      50 ..     330     348 ..     327     352 .. 0.85
   3 ?   -1.7   0.1       1.1   2.7e+03      41      48 ..     985     992 ..     983     992 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.1e-05
   EF-hand_8   6 treelrril.rilglkkglseee.vdilfrefDtdgdGkisfeEFc 49 
                 +r ++  +l  ++ +k+  s++  +d +f+  D ++dG i+f EF+
  KHJ33977.1 270 DRKTFEQCLvPTIAYKH-ASPYLiFDRMFSFYDSNKDGLIGFSEFI 314
                 66666666666666775.777777888******************8 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00035
   EF-hand_8  32 frefDtdgdGkisfeEFcv 50 
                 f   D+dgdG+++ ++F+ 
  KHJ33977.1 330 FEGYDIDGDGYVDRKDFLR 348
                 6667*************86 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1.1
   EF-hand_8  41 GkisfeEF 48 
                 Gkis++EF
  KHJ33977.1 985 GKISYKEF 992
                 9******9 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.3   8.9e-05      0.23       2      21 ..     294     313 ..     293     318 .. 0.89
   2 !    9.1   0.8   0.00037      0.96       3      23 ..     328     348 ..     327     350 .. 0.83
   3 ?    2.2   0.1     0.057   1.5e+02      14      23 ..     985     994 ..     985     997 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 8.9e-05
                 HHHHHHH-SS-SSCE-HHHH CS
   EF-hand_5   2 kdtFqaiDlNgDGkIskeEL 21 
                 + +F+  D N+DG I ++E+
  KHJ33977.1 294 DRMFSFYDSNKDGLIGFSEF 313
                 558****************9 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00037
                 HHHHHH-SS-SSCE-HHHHHH CS
   EF-hand_5   3 dtFqaiDlNgDGkIskeELkt 23 
                 + F+  D +gDG++++  + +
  KHJ33977.1 328 KIFEGYDIDGDGYVDRKDFLR 348
                 567778**********99976 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.057
                 SCE-HHHHHH CS
   EF-hand_5  14 GkIskeELkt 23 
                 GkIs  E+++
  KHJ33977.1 985 GKISYKEFER 994
                 9*******87 PP

>> DUF2865  Protein of unknown function (DUF2865)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.2   2.6e-05     0.066      51     101 ..     878     929 ..     872     940 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.6e-05
     DUF2865  51 gkdieqavslsgkpYselpnA.fkyrkslkkscsCkaagqsaaeaevkaekk 101
                   d++q +s+++++Y +l+   f+yr+s++k+++C ++++  ++ +++ + +
  KHJ33977.1 878 RPDTQQQLSINSQSYISLEDSyFQYRDSTDKERNCYEKEKLQHHRPANPTPE 929
                 56899************987648**************999766666665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1029 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       888  (0.0495287); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.73u 0.26s 00:00:00.99 Elapsed: 00:00:00.41
# Mc/sec: 7536.65
//
Query:       KHJ33978.1  [L=242]
Description: putative phosphatidylserine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-13   50.6   0.1      6e-13   49.4   0.1    1.7  1  CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase


Domain annotation for each model (and alignments):
>> CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4   0.1   3.3e-17     6e-13       2      66 .]      47     119 ..      46     119 .. 0.89

  Alignments for each domain:
  == domain 1  score: 49.4 bits;  conditional E-value: 3.3e-17
                      -HHHHHHHHHHHHHHHHHGGGS-H..........HHHHHHHHHHHHHTTHHHHHHHHTT---HHHHHHHHHHH CS
  CDP-OH_P_transf   2 lPnaiTllrlllsvlailllltyyp........lvlailllliasltDalDGklARrlnqvstlGkllDslaD 66 
                      l++ iT l+ +++v++il  + y          l++a++++ +  ++D++DGk+AR+++++s +G+ lDslaD
       KHJ33978.1  47 LADFITELNGFCGVMSILSSMRYCLgspsaygnLWAALAFMPFGLFFDFMDGKVARWRKKSSLMGQELDSLAD 119
                      6899*************86655555*******9999999999****************99555*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1790.64
//
Query:       KHJ33979.1  [L=209]
Description: putative h aca ribonucleoprotein complex subunit 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-36  123.3   0.0    9.3e-36  122.9   0.0    1.1  1  Gar1      Gar1/Naf1 RNA binding region


Domain annotation for each model (and alignments):
>> Gar1  Gar1/Naf1 RNA binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.9   0.0   5.2e-40   9.3e-36      12     109 ..      35     129 ..      28     145 .. 0.93

  Alignments for each domain:
  == domain 1  score: 122.9 bits;  conditional E-value: 5.2e-40
                 ----TTS-EEEEEEEEEEETTEEEEEE---S--B--BTT-EEEETT--EEEE--EEES-SSS-EEEEE--GGHHHHHHHTTTTSEEEEE-X....XXXX CS
        Gar1  12 ieigppeevleiGtvssivenevviksttsgekkvldfnsilflenktqiGkVdEifGpvnepyysVklnsseeikaksfkvgdkvyiapd..lplerf 108
                  + gpp+e++e+G++ + +e+e+v++s +    k+++fn+++fl+nkt+iGkVdEi+Gp+++ y+++k++  e+i+a+sfk+gdk+yi  d  lple+f
  KHJ33979.1  35 RDNGPPSEIIEMGSFLHSCEGELVCESVNV---KIPYFNAPIFLQNKTSIGKVDEILGPITSLYFTIKPS--EGIQASSFKAGDKFYIGGDrlLPLEKF 128
                 5789************************44...9************************************..*************************** PP

                 X CS
        Gar1 109 l 109
                 l
  KHJ33979.1 129 L 129
                 9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       316  (0.0176251); expected 358.6 (0.02)
Passed bias filter:                      189  (0.0105416); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1655.95
//
Query:       KHJ33980.1  [L=548]
Description: putative transcriptional factor b3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-36  125.3   0.0    4.7e-36  124.7   0.0    1.2  1  PIF1      PIF1-like helicase
    3.8e-07   30.0   0.0    5.5e-07   29.5   0.0    1.2  1  AAA_30    AAA domain
     0.0065   16.5   0.0      0.017   15.1   0.0    1.7  2  AAA_5     AAA domain (dynein-related subfamily)
  ------ inclusion threshold ------
      0.016   15.2   0.0      0.032   14.2   0.0    1.4  1  ResIII    Type III restriction enzyme, res subunit
       0.02   15.2   0.0      0.038   14.3   0.0    1.4  1  AAA_19    AAA domain
       0.02   15.1   0.0      0.049   13.9   0.0    1.6  2  AAA_22    AAA domain
      0.025   15.0   0.1      0.063   13.7   0.0    1.6  2  AAA_16    AAA ATPase domain
      0.046   14.2   0.0      0.072   13.5   0.0    1.3  1  AAA       ATPase family associated with various cellular acti
      0.056   13.4   0.0       0.21   11.5   0.0    1.8  2  NACHT     NACHT domain
      0.097   12.1   0.0       0.15   11.4   0.0    1.2  1  PhoH      PhoH-like protein
       0.13   12.2   0.0       0.26   11.3   0.0    1.4  1  TsaE      Threonylcarbamoyl adenosine biosynthesis protein Ts
       0.14   12.6   0.0       0.39   11.2   0.0    1.6  1  ABC_tran  ABC transporter
        0.2   11.2   0.0       0.31   10.5   0.0    1.2  1  AAA_7     P-loop containing dynein motor region


Domain annotation for each model (and alignments):
>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.7   0.0   3.4e-39   4.7e-36       3     115 ..     396     509 ..     394     519 .. 0.95

  Alignments for each domain:
  == domain 1  score: 124.7 bits;  conditional E-value: 3.4e-39
                 -HHHHHHHHHH.......HCTS-EEEEESTTSSCHHHHHHHHHHCHCTCCCEEEEESSHHHHHCC.TSEECHHHHT-TTSSS-HHHHHHHTSCCCHHHH CS
        PIF1   3 neeQkkvfdaiieavln.ekgklfFvtGsgGtgKtflwkallkklrsegkivlavAssGvAalllegGrtahsrfkiplekdeestckikrgsklaell 100
                 ++ Q+ +f++i+  + n  k+++fF++G +GtgKtfl+k+l++k rsegk+vl+ AssG+Aalll++Grt+hs+f+ip++ +ee +c+i  +s+la ll
  KHJ33980.1 396 SSGQRFAFEKITTIIDNgVKPNTFFLQGPAGTGKTFLYKTLCNKYRSEGKVVLCAASSGIAALLLPKGRTSHSLFNIPINSNEETQCRITGNSDLAGLL 494
                 6789*******999988789******************************************************************************* PP

                 HC-SEEEEECGGGSB CS
        PIF1 101 kktsliiwDEapmve 115
                  +t+liiwDE+ + +
  KHJ33980.1 495 RRTHLIIWDEVTLQN 509
                 **********99876 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.0     4e-10   5.5e-07      19     100 ..     417     508 ..     394     535 .. 0.62

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 4e-10
      AAA_30  19 rvavltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLaeelgieastiakllkrlk..................grarlepgtllivDEagm 99 
                  + +l+GpAGtGKt++ k+l + ++++g+ v+ +A++g aA  L ++        ++l +                     g   l++ +l+i DE+ +
  KHJ33980.1 417 NTFFLQGPAGTGKTFLYKTLCNKYRSEGKVVLCAASSGIAALLLPKGRT-----SHSLFN-IPinsneetqcritgnsdlaG--LLRRTHLIIWDEVTL 507
                 3779************************999999999999988885322.....222221.111122233333334443321..344447777777766 PP

      AAA_30 100 v 100
                  
  KHJ33980.1 508 Q 508
                 5 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       4.8   6.6e+03      49      75 ..     230     261 ..     220     279 .. 0.62
   2 !   15.1   0.0   1.2e-05     0.017       2      35 ..     419     452 ..     418     461 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4.8
                 ........--------.....G-SEEEEESGG CS
       AAA_5  49 ngttslvdsplvraar.....egeilvlDEve 75 
                 ng +  ++s++ ra       + ++ ++D ++
  KHJ33980.1 230 NGIEYVSPSAACRALGlladeREWVEFIDQIK 261
                 55555566666666656666666666666665 PP

  == domain 2  score: 15.1 bits;  conditional E-value: 1.2e-05
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrd 35 
                 ++L+Gp GtgK++l + l+  +++e  +v++ ++
  KHJ33980.1 419 FFLQGPAGTGKTFLYKTLCNKYRSEGKVVLCAAS 452
                 79********************999999888775 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   2.3e-05     0.032       4      58 ..     395     447 ..     392     460 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.3e-05
                 E-HHHHHHHHHHT.......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EE CS
      ResIII   4 lreyQeeaienlleklks.krdkrglikmaTGtGKTlvaaklierllkkgkeekfl 58 
                 + + Q  a e++   +++  + + ++++ + GtGKT+++  l+ +++++gk   ++
  KHJ33980.1 395 FSSGQRFAFEKITTIIDNgVKPNTFFLQGPAGTGKTFLYKTLCNKYRSEGK---VV 447
                 67889999999998888545566889********************99754...44 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   2.7e-05     0.038       5      58 ..     410     460 ..     407     509 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.7e-05
      AAA_19   5 ve.alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakel 58 
                 ++  +k +++++ +++GtGKT + k+ ++ + ++g+v    +l++a  g Aa  l
  KHJ33980.1 410 IDnGVKPNTFFLQGPAGTGKTFLYKTLCNKYRSEGKV----VLCAASSGIAALLL 460
                 5447788999************************966....88888888777544 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       5.4   7.4e+03      44      64 ..     276     296 ..     238     310 .. 0.50
   2 ?   13.9   0.0   3.6e-05     0.049       9      51 ..     420     464 ..     415     505 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 5.4
      AAA_22  44 fvtlpsstsskdllrellral 64 
                 ++t +  ts + +++++  ++
  KHJ33980.1 276 LITNSLVTSAQAIWEKFKDFF 296
                 233333334455555555544 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 3.6e-05
      AAA_22   9 vvtGesGtGKTtllrrlleqldeeakaee..erpevvfvtlpsst 51 
                 ++ G++GtGKT+l+++l +++  e k     ++++++   lp++ 
  KHJ33980.1 420 FLQGPAGTGKTFLYKTLCNKYRSEGKVVLcaASSGIAALLLPKGR 464
                 577*****************9543333335444444455555555 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       4.2   5.8e+03      85     106 ..     244     265 ..     232     302 .. 0.50
   2 ?   13.7   0.0   4.5e-05     0.063      23      52 ..     415     444 ..     398     466 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 4.2
      AAA_16  85 lldeaesaeleawrekleeala 106
                 l+  a+++e+ ++ ++++++++
  KHJ33980.1 244 LGLLADEREWVEFIDQIKDTAT 265
                 3333334444444444444433 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 4.5e-05
      AAA_16  23 rpelvllsGesGvGKsslvrellralekdg 52 
                  p+  +l G++G+GK+ l ++l + ++ +g
  KHJ33980.1 415 KPNTFFLQGPAGTGKTFLYKTLCNKYRSEG 444
                 35899*****************99888874 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   5.2e-05     0.072       3      24 ..     421     442 ..     419     506 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 5.2e-05
                 EESSTTSSHHHHHHHHHHHHTH CS
         AAA   3 lyGppGtGKTllakavakelgv 24 
                 l Gp GtGKT l k ++++  +
  KHJ33980.1 421 LQGPAGTGKTFLYKTLCNKYRS 442
                 88****************9753 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       1.3   1.8e+03     103     125 ..     267     289 ..     253     290 .. 0.75
   2 ?   11.5   0.0   0.00016      0.21       2      26 ..     418     442 ..     417     449 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.3
                 ......HHHHHCTTTTT--EEEE CS
       NACHT 103 qpvrtlLselirkkllpeaslll 125
                   +r  L++li+ +l+++a  ++
  KHJ33980.1 267 HTLRMTLASLITNSLVTSAQAIW 289
                 467889*********99998776 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00016
                 CEEEEC-TTTCHHHHHHHHHHHHCT CS
       NACHT   2 lvilqGeaGsGKTtLlqklalawae 26 
                 + +lqG+aG GKT L + l+ + ++
  KHJ33980.1 418 TFFLQGPAGTGKTFLYKTLCNKYRS 442
                 679***************9988765 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00011      0.15      17      38 ..     411     435 ..     394     447 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00011
                 H...H-SEEEEE--TTSSTTHHHHH CS
        PhoH  17 k...kndivfaiGpaGtGKtylava 38 
                 +   k +  f  GpaGtGKt+l  +
  KHJ33980.1 411 DngvKPNTFFLQGPAGTGKTFLYKT 435
                 24446678999**********9665 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00019      0.26      19      46 ..     416     443 ..     396     448 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00019
                 TEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE  19 gdvilLeGdLGaGKTtlvrglakalgve 46 
                  ++++L+G+ G+GKT l + l++++  e
  KHJ33980.1 416 PNTFFLQGPAGTGKTFLYKTLCNKYRSE 443
                 45699****************9988665 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00029      0.39      14      44 ..     419     448 ..     413     484 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00029
                 EEEEESTTSSHHHHHHHHTTSS--SEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  14 vaivGenGaGKStLlkllagllkpteGeill 44 
                   + G+ G+GK+ L k+l+++++  eG++ l
  KHJ33980.1 419 FFLQGPAGTGKTFLYKTLCNKYR-SEGKVVL 448
                 6789******************8.6999854 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00023      0.31      35      62 ..     418     445 ..     404     455 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00023
       AAA_7  35 pvllvGptGtGKtviikdllkkldkeky 62 
                  ++l Gp+GtGKt + k+l++k+ +e  
  KHJ33980.1 418 TFFLQGPAGTGKTFLYKTLCNKYRSEGK 445
                 57899**************999987654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (548 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       356  (0.0198561); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.59u 0.23s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3879.11
//
Query:       KHJ33981.1  [L=535]
Description: putative 5-aminolevulinate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-77  260.8   0.0    2.5e-77  260.5   0.0    1.1  1  Aminotran_1_2    Aminotransferase class I and II
    9.8e-06   24.8   0.0    1.5e-05   24.1   0.0    1.3  1  Aminotran_5      Aminotransferase class-V
    7.6e-05   21.4   0.0    0.00013   20.6   0.0    1.3  1  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
  ------ inclusion threshold ------
      0.029   13.7   0.3       0.05   12.9   0.3    1.3  1  DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
      0.049   12.9   0.1       0.09   12.0   0.1    1.4  1  Beta_elim_lyase  Beta-eliminating lyase


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  260.5   0.0     7e-81   2.5e-77       2     363 .]     112     468 ..     111     468 .. 0.97

  Alignments for each domain:
  == domain 1  score: 260.5 bits;  conditional E-value: 7e-81
                    EEEESSSSSTTSTTSSHHHHHHHHHHHH..HHHHHTSTTST-BTTHHHHHHHHHHHHHCTCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-E CS
  Aminotran_1_2   2 dvinLgsneylgdsgkptlpevakaeke..galaggtlneygpidglpeleealakflgrseklklkreaavvvgsGagaliealifllklnpgde 95 
                    +v+ ++sn+ylg+s++p++  +++ +    ga+aggt+n++g+++ + +lee++ak++         +eaa+v++s++ a++++l +l ++ p+++
     KHJ33981.1 112 KVTVWCSNDYLGMSRNPQVLQAIHDTLNvyGAGAGGTRNISGHNQQAVALEETIAKLHA--------KEAALVFTSCYVANDATLSTLGSKLPDCV 199
                    7899************999999999999*******************************........999************************** PP

                    EEEEESS-THHHHHHHHTTSEEEEEEBEETTTTEE-HHHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTT CS
  Aminotran_1_2  96 ilvpdptyasyknilrlsggevvryplyseedfhldlealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYa 191
                    ++++++++as+++++r+sg++   ++       h++l +le +l++ p   +  k+i++es+++++G++a+ +e+++l   a+kyn+l+f+De++a
     KHJ33981.1 200 FFSDSLNHASMIQGIRHSGAKKLIFA-------HNNLIDLESKLSSVPHSVP--KIIAFESVYSMCGSIAPIKEICDL---AEKYNALTFLDEVHA 283
                    **************************.......*************988888..************************...*************** PP

                    TCBSSSSHTHHH.............HGGSTTSTTEEEEEESSSTTSSGGG-EEEEEEEHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHH CS
  Aminotran_1_2 192 gfvfgsldavat.............ranveeepnllivgslsKafGlaGeRvGyilgnaavvsqlrklsrpflsssllqaavaaalsdallkqsel 274
                    ++++g+++a  +               +v+++++ +i g+l+Ka+G++G   Gyi+g++++v+++r+l+ +f++++ l++av+  +++a  +q + 
     KHJ33981.1 284 VGMYGPHGAGVAehldfyshaaqkpKGTVMDRVD-IISGTLGKAYGSVG---GYITGSSRFVDAIRSLAPGFIFTTTLPPAVMSGANKAINYQMQY 375
                    *****99666667788888899999999999999.**************...******************************************** PP

                    HHHHHHHHHHHHHHHHHHHHSTEEEECCSCSSEEEEEETHHCHHHHHHHHHHTCTEEEEEGGGGTS...TTEEEEEC.TTS-HHHHHHHHHHH CS
  Aminotran_1_2 275 eemrqrlqkrrkelrdeLaelglkvlasqsgmflltdlsaetakelskkLleevgvyvtpgtsftv...pgrlRitv.Aglteeeleelveal 363
                    +  r   q +++ +++eL + +++v++++s+++++ +++a  ak++s+ Lle++++yv+ ++++tv   ++rlRit+ ++++++  e+l +al
     KHJ33981.1 376 QGDRCLQQLHTRAIKNELVARDIPVIPNPSHIIPILVGNAMLAKAASDLLLEKHNIYVQSINYPTVpvgQERLRITPtPNHNSALQEHLFDAL 468
                    ************************************************************************************999998876 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   4.3e-09   1.5e-05      13     202 ..     128     308 ..     121     406 .. 0.79

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 4.3e-09
                  HHHHHHHHHHHHCTCCSSSSSSSHHHHHHHHHHHHHHHHHHHHHT-STGGGEEEESSHHHHHHHHHHHCCCC-TTTSEEEEETTSHGGGTHHHHHHHH CS
  Aminotran_5  13 qeVldalqeyytdynanvhrsvhhlgkeatkaveearekvaelinaeseeeiiftsGtteainlvalslarslkpgdeivvteaehhanlvpwqelak 110
                  ++Vl+a+ +   + ++++  ++ + + +  ++  + +e++a+l+  e    ++fts+   a+ + + +l+   k  d++  +++  ha +  +q ++ 
   KHJ33981.1 128 PQVLQAIHDT-LNVYGAGAGGTRNISGHN-QQAVALEETIAKLHAKE--AALVFTSCYV-ANDATLSTLGS--KLPDCVFFSDSLNHASM--IQGIR- 215
                  7899999999.558888877777777755.455578999**998777..69*****988.99999999964..55677777777777777..69998. PP

                  HHTEEEEEEEBETTSCBEGGGHHHH-.-TTEEEEEEESBETTTTEB--HHHHHHHHHHTT-EEEEE-TTTTTTS---HHHH..TESEEEEETTTT CS
  Aminotran_5 111 rtgakvkvipldeegeldldelekll.nektklvaithvsnvtGtiqpveeigklakkkgalvlvDaaqavghipidvkkl..gvDflafsghKl 202
                    gak  ++ + ++ ++dl+   + +    +k++a+  v ++ G i p++ei++la k++al+++D + avg +    + +   +Df++  ++K 
   KHJ33981.1 216 HSGAK--KLIFAHNNLIDLESKLSSVpHSVPKIIAFESVYSMCGSIAPIKEICDLAEKYNALTFLDEVHAVGMYGPHGAGVaeHLDFYSHAAQKP 308
                  55665..455667899997766665526889***************************************9977555443311578888888874 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   3.7e-08   0.00013      51     180 ..     155     286 ..     151     295 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 3.7e-08
                      -HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHTTS-T.TEEEEEESTSSHHHHHH.HHHTHHHTTCEEEEESTTSHHHHHHHCCTTEEEEE CS
  Cys_Met_Meta_PP  51 nptrsvleeriaaLeggeaalavssGmaAiaaailallka.GdeivvsddlYggtqrl.lkkvlkklgievkfvdtsdleelekaikentklvy 142
                      n    +lee+ia+L+  eaal+++s   A +a++ +l ++  d +  sd+l   +  + +++   k  i ++    + +++l ++ ++  k++ 
       KHJ33981.1 155 NQQAVALEETIAKLHAKEAALVFTSCYVANDATLSTLGSKlPDCVFFSDSLNHASMIQgIRHSGAKKLIFAHNNLIDLESKLSSVPHSVPKIIA 248
                      666789*******************************8875888888888876665432566655555555555556677888888999***** PP

                      EESS-TTTT----HHHHHHHHHHTT-EEEEEGTTTHTT CS
  Cys_Met_Meta_PP 143 lEtptnpllkvvDiekiaklakkagvlvvvDntfaspl 180
                      +E++ +   +++ i++i++la k ++l+++D + a ++
       KHJ33981.1 249 FESVYSMCGSIAPIKEICDLAEKYNALTFLDEVHAVGM 286
                      *******************************9887765 PP

>> DegT_DnrJ_EryC1  DegT/DnrJ/EryC1/StrS aminotransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.3   1.4e-05      0.05      22     169 ..     155     303 ..     142     312 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.4e-05
                      SHHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHTTTTTT-EEEEE.SSS-THHHHHHHHTT-EE.EEE-B-TTTSSB-GGGCGGG--TTEE CS
  DegT_DnrJ_EryC1  22 gpeveeFEkafaaylgvkhaiavssGtaAlhlaLralgvgpgdeVIvp.sltFvatanavlelgakp.vfvDvdpdtynidpaaieaaitertk 113
                      +++  ++E+ +a+ + ++ a+ ++s+  A+  +L+ lg +  d V    sl+ ++ ++ ++++gak  +f+  +  ++  + +++   + +  +
       KHJ33981.1 155 NQQAVALEETIAKLHAKEAALVFTSCYVANDATLSTLGSKLPDCVFFSdSLNHASMIQGIRHSGAKKlIFAHNNLIDLESKLSSVPHSVPKIIA 248
                      5667789*********************************88888776267777788********86267777777888888888888877777 PP

                      EEEEB-GGGB---HHHHHHHHHHCT-EEEEE-TT-TT-EETTEECCCSSSEEEEE- CS
  DegT_DnrJ_EryC1 114 aIlpVhlyGqvadmdalkaiaakhglkvieDaAhAlGatykgkkvGalgdaavfSF 169
                         +  + G +a ++++ ++a+k++   + D  hA+G  y  + +G  + +  +S 
       KHJ33981.1 249 FESVYSMCGSIAPIKEICDLAEKYNALTFLDEVHAVGM-YGPHGAGVAEHLDFYSH 303
                      77788999****************************95.44455555555555555 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   2.5e-05      0.09      29     167 ..     153     279 ..     142     348 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.5e-05
                      T--HHHHHHHHHHHHHTT-SEEEEES-HHHHHHHHHHHH--TTEEEEEETT-HHHHSSTTHHHHCC--EEEEE-EBTTTBE-HHHHHHHS--S- CS
  Beta_elim_lyase  29 gedktvnrLedavaelfgkeaalfvpqGtaAnsillkillqrgeevivtepahihfdetgaiaelagvklrdlknkeaGkmdlekleaaikevg 122
                      g +++  +Le+++a+l  keaal +++   An   l++l  + +  ++ +++  h    ++i + +  kl+ + n+      l +le+++  v 
       KHJ33981.1 153 GHNQQAVALEETIAKLHAKEAALVFTSCYVANDATLSTLGSKLPDCVFFSDSLNHASMIQGIRHSGAKKLIFAHNN------LIDLESKLSSVP 240
                      889999**********************************999999999998888888888866555544444433......567888888877 PP

                      TTS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEE CS
  Beta_elim_lyase 123 aheekiklisltvTnntagGqvvsleelrevaaiakkygiplhlD 167
                           +k+i  +     ++G + +   ++e+ ++a+ky+   +lD
       KHJ33981.1 241 H--SVPKIIAFESVYS-MCGSIAP---IKEICDLAEKYNALTFLD 279
                      7..6667777776666.6997766...667788889998888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       575  (0.0320709); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 3889.17
//
Query:       KHJ33982.1  [L=295]
Description: putative transcriptional factor b3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-05   24.2   0.0    2.8e-05   23.5   0.0    1.3  1  PIF1      PIF1-like helicase
  ------ inclusion threshold ------
      0.039   13.7   0.0      0.058   13.1   0.0    1.2  1  AAA_30    AAA domain


Domain annotation for each model (and alignments):
>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   3.1e-09   2.8e-05       4      50 ..     194     241 ..     191     247 .. 0.82

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 3.1e-09
                 HHHHHHHHHH.......HCTS-EEEEESTTSSCHHHHHHHHHHCHCTC CS
        PIF1   4 eeQkkvfdaiieavln.ekgklfFvtGsgGtgKtflwkallkklrseg 50 
                   Q+++fd+i+ ++ + +++++fF++G +GtgK f+ k  + ++  ++
  KHJ33982.1 194 PGQRSAFDKIVSTIDTnSRPNTFFLQGPAGTGKPFFIKLYVISIVRKE 241
                 67***********986489****************9997666655544 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   6.5e-06     0.058       3      39 ..     193     234 ..     191     251 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 6.5e-06
      AAA_30   3 naeQaaaveallt.....sgdrvavltGpAGtGKttalkalr 39 
                 +++Q++a++++++     s+  + +l+GpAGtGK + +k ++
  KHJ33982.1 193 SPGQRSAFDKIVStidtnSRPNTFFLQGPAGTGKPFFIKLYV 234
                 7788888888875222224556899************99874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2143.64
//
Query:       KHJ33983.1  [L=306]
Description: putative glycosyl [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 2151.51
//
Query:       KHJ33984.1  [L=382]
Description: putative dual specificity phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-25   89.5   0.0    5.8e-23   81.2   0.0    2.3  1  DSPc             Dual specificity phosphatase, catalytic doma
    1.7e-05   24.5   0.1    2.7e-05   23.9   0.1    1.2  1  Y_phosphatase    Protein-tyrosine phosphatase
  ------ inclusion threshold ------
      0.021   15.1   0.1      0.099   12.9   0.1    2.1  1  Init_tRNA_PT     Rit1 DUSP-like domain
      0.023   14.8   0.0      0.035   14.2   0.0    1.3  1  PTPlike_phytase  Inositol hexakisphosphate
      0.067   13.1   0.0        3.9    7.4   0.0    2.4  2  Phage_base_V     Type VI secretion system, phage-baseplate in


Domain annotation for each model (and alignments):
>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.2   0.0   1.6e-26   5.8e-23       1     132 [.     142     319 ..     142     320 .. 0.93

  Alignments for each domain:
  == domain 1  score: 81.2 bits;  conditional E-value: 1.6e-26
                 EEEEECCHHCHHHHHHHTCSEEEEESSSSSEC....ECCTTTTSEEEEEC.CES............................................S CS
        DSPc   1 lylgskstaslallsklgitlvinvtkevpna....nalkkseieklrip.ved............................................e 50 
                 +yl+s+++ +    ++l++++vinv++ev+ +     ++++  ++ +++p ++                                             +
  KHJ33984.1 142 IYLYSEPKFE----EILNFDVVINVAREVKCPteidEIISQGTQRLIDVPiIRLdraksdsglknittkslisiplekyqsaksskqthmleyihvpwD 236
                 7999999999....**************99889999777889999999995444799999999999999999999999********************* PP

                 TTSCCGGGHHHHHHHHHHHHHTT-EEEEEESSSSSHHHHHHHHHHHHHHT.SCHHHHHHHHHHHSTT-SSTHHHHHHHHHHHH CS
        DSPc  51 hetkiskyleeavefidkakqkgkkvlVHCqaGisRSatliiaYlmktkn.lslneayeflkerrpaispnagfirqLleyek 132
                 h+t++ ++l ++ + i++  + gk++lVHCq G sRSatliiaY m+t++ +  ne y+++++++p+++pn++++++L +++k
  KHJ33984.1 237 HNTDVKDELWDLCQLIESRSKIGKRILVHCQQGASRSATLIIAYGMYTNHdIGPNESYQIVQSKSPWVNPNMSLLFSLNDFKK 319
                 **********************************************998736**************************99875 PP

>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.1   7.4e-09   2.7e-05     122     191 ..     215     280 ..     195     300 .. 0.75

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 7.4e-09
                    EEEETTTTEEEEEEEEEEESSS-SSSSGSCCHHHHHHHHHHHHHHSTTSS-EEEECSSSSHHHHHHHHHH CS
  Y_phosphatase 122 evkkkkeeseerevkqlqytnWpdhgvpesaksllklirkvekskeaksgpvvVhCsaGvgRtgtfvald 191
                    +++  k++ ++ ++ ++ +  W ++   + +++l++l++ +e+++ +  + ++VhC +G++R++t++ + 
     KHJ33984.1 215 KYQSAKSS-KQTHMLEYIHVPWDHNT--DVKDELWDLCQLIESRS-KIGKRILVHCQQGASRSATLIIAY 280
                    33333333.45677888888998777..77888999999999888.7889****************9875 PP

>> Init_tRNA_PT  Rit1 DUSP-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   2.8e-05     0.099      14      62 ..     238     284 ..     214     317 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.8e-05
  Init_tRNA_PT  14 sknLrtalpkivdfvrkrlsedkkkkilvacetGkdlsvgvaLailckl 62 
                   + + +++l ++++ +++r++ +k  +ilv+c++G + s+ +++a  +++
    KHJ33984.1 238 NTDVKDELWDLCQLIESRSKIGK--RILVHCQQGASRSATLIIAYGMYT 284
                   667889999*********98877..***********9999888765554 PP

>> PTPlike_phytase  Inositol hexakisphosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   9.9e-06     0.035      85     154 ..     211     282 ..     174     284 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 9.9e-06
                      ...EE-H..HHHHHHTT-EEEEEEE-TTS---HHHHHHHHHHHHTS-T.T-EEEEE-SSSSHHHHHHHHHHHH CS
  PTPlike_phytase  85 tpeevye..relaeelslrYaRipitdekapeeedfdalvsilkeape.ktalvfnCqmGrgRTTtamviatL 154
                       p e y+  +  ++++ l+Y  +p   ++  ++ ++ +l +++++ ++  + ++++Cq G  R+ t ++++ +
       KHJ33984.1 211 IPLEKYQsaKSSKQTHMLEYIHVPWDHNTDVKD-ELWDLCQLIESRSKiGKRILVHCQQGASRSATLIIAYGM 282
                      455555522445566678999999987777766.577799999999555*****************9999887 PP

>> Phage_base_V  Type VI secretion system, phage-baseplate injector
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0    0.0011       3.9      69     107 ..     100     140 ..      94     143 .. 0.87
   2 ?    2.9   0.0     0.027        97      55      91 ..     257     295 ..     252     300 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0011
                   TXXEEEEEEEX..XSSSXXSXXBTS-EEEE-TTS-EEEEET CS
  Phage_base_V  69 latavvlpgly..sdafpapsnsadaevirfpDGavieYdt 107
                   +++a++lpg+    daf+ +++s+d+++ ++p G ++ Y++
    KHJ33984.1 100 VQMATLLPGVTvgGDAFDRAHSSEDTSSSSYPNGPILMYEP 140
                   678999999763379************************97 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.027
                   XTTXEEEEEEXXTTTXXEEEEE..EEXXSSSXXSXXBTS CS
  Phage_base_V  55 svGEqvvllspsGelatavvlp..glysdafpapsnsad 91 
                   ++G  +++ + +G   +a++++  g+y+++   p++s +
    KHJ33984.1 257 KIGKRILVHCQQGASRSATLIIayGMYTNHDIGPNESYQ 295
                   7899*********99998877533899998888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2861.35
//
Query:       KHJ33985.1  [L=305]
Description: putative trna 2 -phosphotransferase 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-65  219.5   0.0    4.6e-65  219.1   0.0    1.2  1  PTS_2-RNA  RNA 2'-phosphotransferase, Tpt1 / KptA family


Domain annotation for each model (and alignments):
>> PTS_2-RNA  RNA 2'-phosphotransferase, Tpt1 / KptA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.1   0.0   2.5e-69   4.6e-65       2     181 .]      52     242 ..      51     242 .. 0.93

  Alignments for each domain:
  == domain 1  score: 219.1 bits;  conditional E-value: 2.5e-69
   PTS_2-RNA   2 revqlskaLsyiLRhgaekegLkiredGyvkvedlLelpklkslkvtleeikevVesndKqRFelv.el..........eelliranqghsikkvesse 89 
                 +ev +skaLs++LRh+a++ gLk++++ y++v+++Le+++lks+++t+++i++vV++++K RF+l+ ++          +++liranqghsik v +se
  KHJ33985.1  52 KEVVVSKALSKLLRHAASDVGLKLDSEAYAQVDQVLEWQRLKSMHITFADIQKVVDEDAKCRFSLKpNPsratpeptepSDWLIRANQGHSIK-V-DSE 148
                 6899************************************************************99555*********855**********85.3.557 PP

   PTS_2-RNA  90 lllepi.esaeelpevvvHgTylkawesilasggLkrmsrnhihlatglpgeke.visgmrksaevliyidvekaladgikfyvsengviLteG 181
                 +ll p+ ++ +++p++vvHgTy+ ++ si++sggL+rm+r+hih+++g++++ + visgmrk+ae+liyid+++ ++dgi +++s+ngv+LteG
  KHJ33985.1 149 KLLIPVtNEMNNIPDTVVHGTYYCFYSSIMKSGGLSRMTRTHIHFSNGVKKDGQkVISGMRKDAEILIYIDIKASIEDGILWWLSDNGVVLTEG 242
                 899999555667************************************9766444**************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       843  (0.0470188); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 2482.70
//
Query:       KHJ33986.1  [L=147]
Description: hypothetical protein EV44_g6081 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.2e-19   67.6   0.0    1.3e-18   67.0   0.0    1.3  1  PAC4      Proteasome assembly chaperone 4


Domain annotation for each model (and alignments):
>> PAC4  Proteasome assembly chaperone 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.0   0.0     7e-23   1.3e-18       1      80 []      32     113 ..      32     113 .. 0.95

  Alignments for each domain:
  == domain 1  score: 67.0 bits;  conditional E-value: 7e-23
        PAC4   1 tlhlqltrladsillwvgtasskeas..plgslvvAmpsrtnkktptisTtLlgdg.sdeaserlAqrLArRlgkqvfvScnl 80 
                 +++l+lt+ a+ ill+++ta+++++    lgs+v A+p+  n++++ isT+L+ d+ s+++s+rlA+ LAr++gk v+v++++
  KHJ33986.1  32 RIYLRLTIRAKFILLFLTTAQDGDSVaaSLGSFVFALPDHLNPGQS-ISTPLYIDKpSLDFSSRLAKFLARKYGKAVYVGNSI 113
                 589*****************9998779999************9855.9*******99************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (147 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       286  (0.0159518); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 1106.81
//
Query:       KHJ33987.1  [L=940]
Description: putative arm repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.2e-30  103.5  12.6    6.7e-17   61.6   0.0   11.0 13  HEAT_EZ         HEAT-like repeat
    1.9e-19   68.1   5.3    5.4e-05   23.1   0.0    9.3  8  HEAT            HEAT repeat
    1.3e-13   51.2   1.5    3.3e-05   24.2   0.0    7.2  7  HEAT_2          HEAT repeats
    2.3e-08   34.5   1.4       0.22   12.2   0.0    7.0  9  Vac14_Fab1_bd   Vacuolar 14 Fab1-binding region
    9.6e-07   29.0   1.2       0.16   12.0   0.0    4.9  4  Cnd1            non-SMC mitotic condensation complex subunit 
    2.4e-05   23.7   7.5       0.31   10.1   0.0    5.3  5  MMS19_C         RNAPII transcription regulator C-terminal
    0.00056   19.8   1.5      0.011   15.6   0.7    3.6  2  IBN_N           Importin-beta N-terminal domain
     0.0043   17.6   2.4         15    6.6   0.0    5.6  4  HEAT_PBS        PBS lyase HEAT-like repeat
     0.0045   17.0   0.7       0.62   10.2   0.0    4.4  4  Arm             Armadillo/beta-catenin-like repeat
  ------ inclusion threshold ------
      0.029   14.3   0.0         11    6.0   0.0    3.2  2  DUF3437         Domain of unknown function (DUF3437)
      0.031   13.8   2.0        2.2    7.7   0.0    4.3  5  Tti2            Tti2 family
      0.035   13.9   6.9         17    5.1   0.0    5.9  8  RIX1            rRNA processing/ribosome biogenesis
        0.1   12.4   0.0        0.4   10.5   0.0    2.0  1  BP28CT          BP28CT (NUC211) domain
       0.12   12.8   0.4         27    5.2   0.0    3.8  3  TAF6_C          TAF6 C-terminal HEAT repeat domain
       0.14   12.5   0.2       0.14   12.5   0.2    2.9  2  Importin_rep_4  Importin repeat
        2.2    8.0   5.3         23    4.7   0.0    2.5  2  Rrp44_CSD1      Rrp44-like cold shock domain


Domain annotation for each model (and alignments):
>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.9   3.3e+03       4      48 ..      73     118 ..      71     125 .. 0.68
   2 ?   -1.3   0.0         3   3.4e+03      27      54 ..     135     166 ..     135     167 .. 0.63
   3 ?    6.1   0.0     0.014        16       5      52 ..     158     211 ..     154     214 .. 0.70
   4 ?    2.1   0.2      0.27     3e+02      18      50 ..     218     250 ..     207     252 .. 0.81
   5 ?   -0.3   0.0       1.5   1.7e+03       3      34 ..     244     275 ..     242     278 .. 0.87
   6 ?    1.0   0.0      0.56   6.3e+02      22      42 ..     307     328 ..     296     336 .. 0.70
   7 ?    0.8   0.0      0.66   7.4e+02       1      38 [.     402     436 ..     402     439 .. 0.79
   8 !   61.6   0.0     6e-20   6.7e-17       1      54 [.     440     493 ..     440     494 .. 0.98
   9 ?    4.3   0.0     0.055        62       2      34 ..     528     560 ..     504     569 .. 0.76
  10 ?    0.2   0.1       1.1   1.2e+03      21      37 ..     588     602 ..     577     605 .. 0.56
  11 ?    4.2   0.0     0.057        64      15      47 ..     689     721 ..     681     728 .. 0.86
  12 ?    1.9   0.0       0.3   3.4e+02       3      38 ..     718     753 ..     716     756 .. 0.87
  13 !   16.9   0.0     6e-06    0.0067       5      55 .]     770     822 ..     767     846 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2.9
     HEAT_EZ   4 RraAawaLGrlaggepellqplvpeilpaLlalL.nddsdeVRaaA 48 
                 R+aAa  L +   ++   ++++  ++++a ++l  +d++ + R +A
  KHJ33987.1  73 RAAAATMLKNNIKENYKNIRTESLDLIRATVPLVlQDKNNLMRNYA 118
                 7788888887444666667777777888888777566666778777 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 3
     HEAT_EZ  27 peilpaLlalL.nddsd...eVRaaAagaLgn 54 
                 p+i+ +Llal  nd      e ++ A  aL++
  KHJ33987.1 135 PQIISELLALVgNDNGIitsEAQEGAMTALSK 166
                 78999999998444444543447777777776 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.014
     HEAT_EZ   5 raAawaLGr.laggepel......lqplvpeilpaLlalLnddsdeVRaaAagaL 52 
                 ++A  aL+  ++ + +         q  +++i+p L+++  + ++++R  A+ ++
  KHJ33987.1 158 EGAMTALSKiCEDNKK-PldreyqGQRPLTVIIPRLISFTYNNNPKIRSLALSTI 211
                 5666666654222222.2244444667999********************99776 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.27
     HEAT_EZ  18 epellqplvpeilpaLlalLnddsdeVRaaAag 50 
                 +p++l   ++e+l  L +l  d+s++VR  ++ 
  KHJ33987.1 218 APQALLSSLDELLQRLFQLSVDKSADVRRHVCC 250
                 5788888899******************99986 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 1.5
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilpaLl 34 
                 vRr+++  +  + +  pe + p+++ ++++++
  KHJ33987.1 244 VRRHVCCSFVHIVEIQPEKIMPHITGLVDYMI 275
                 899999988669999*************9998 PP

  == domain 6  score: 1.0 bits;  conditional E-value: 0.56
     HEAT_EZ  22 lqplvpeilpaLlalL.nddsd 42 
                 l+p++ +i+p Ll  +  +d+d
  KHJ33987.1 307 LAPYLNKIIPVLLESMvYSDND 328
                 5678888888888555466665 PP

  == domain 7  score: 0.8 bits;  conditional E-value: 0.66
     HEAT_EZ   1 wrvRraAawaLGrlaggepellqplvpeilpaLlalLn 38 
                 w++R   a+aL    + +++  +p+ + ilp+L+  L+
  KHJ33987.1 402 WNLRKCSAAALD---VFASNFRAPVFDTILPYLMLNLK 436
                 899999999997...66688888888999999986665 PP

  == domain 8  score: 61.6 bits;  conditional E-value: 6e-20
     HEAT_EZ   1 wrvRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLgn 54 
                 wr R+aA++aLG++a+g+ + + p++p+++p+L++lL d++++VR+ ++++Lg+
  KHJ33987.1 440 WRYREAAVLALGAVAEGCLDIVTPHLPDLVPYLISLLDDSEPLVRQITCWTLGR 493
                 9****************************************************8 PP

  == domain 9  score: 4.3 bits;  conditional E-value: 0.055
     HEAT_EZ   2 rvRraAawaLGrlaggepellqplvpeilpaLl 34 
                 rv++a+a+a++ l++ ++  +  + + i+ +++
  KHJ33987.1 528 RVQEAGASAFAHLEEKASLSIISYCQPIIQQFV 560
                 789999999988777777775555555555555 PP

  == domain 10  score: 0.2 bits;  conditional E-value: 1.1
     HEAT_EZ  21 llqplvpeilpaLlalL 37 
                  l+  +p+i+++L+++L
  KHJ33987.1 588 GLS--QPQIVDLLMPAL 602
                 433..555555555544 PP

  == domain 11  score: 4.2 bits;  conditional E-value: 0.057
     HEAT_EZ  15 aggepellqplvpeilpaLlalLnddsdeVRaa 47 
                 a++ + l+++ +p i ++L  +++d+  +VR+ 
  KHJ33987.1 689 AQQSASLISTSQPSIFDLLNFCMQDPANDVRQS 721
                 6888899***********************986 PP

  == domain 12  score: 1.9 bits;  conditional E-value: 0.3
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilpaLlalLn 38 
                 vR + ++ LG +a   +++l+p ++++lp L++ L+
  KHJ33987.1 718 VRQSSYALLGDCAKFVFPQLRPCLDKLLPILVKQLE 753
                 89999999***9999999999999999999998884 PP

  == domain 13  score: 16.9 bits;  conditional E-value: 6e-06
     HEAT_EZ   5 raAawaLGrlaggepellqplvpeilpaLlalLnddsd..eVRaaAagaLgnl 55 
                 ++ +w  G++a + +  ++++v+++++  l+ L++++   +V ++Aa+aLg+l
  KHJ33987.1 770 NNTCWSAGEIAIQYGKGMALYVQKLMKRYLQILENPEVprSVLENAAIALGRL 822
                 677899999************************998888999*********97 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0      0.11   1.2e+02       1      26 [.     188     213 ..     188     217 .. 0.86
   2 ?    2.6   0.1      0.18   2.1e+02       1      21 [.     229     249 ..     229     258 .. 0.78
   3 ?    0.3   0.0         1   1.2e+03      13      30 ..     401     418 ..     399     419 .. 0.88
   4 !   23.1   0.0   4.8e-08   5.4e-05       1      31 []     427     457 ..     427     457 .. 0.97
   5 !   18.6   0.0   1.4e-06    0.0015       1      29 [.     468     496 ..     468     498 .. 0.93
   6 ?    1.2   0.0      0.51   5.7e+02       5      27 ..     518     540 ..     514     543 .. 0.82
   7 !    9.0   0.0    0.0017       1.9       7      30 ..     709     732 ..     703     733 .. 0.83
   8 ?   -0.2   0.0       1.5   1.7e+03      16      27 ..     811     822 ..     801     823 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.11
                 HHHHHHHHHT-SSHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLga 26 
                 ++P l++    ++p++R+ A+ ++  
  KHJ33987.1 188 IIPRLISFTYNNNPKIRSLALSTINL 213
                 78999998899**********99875 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.18
                 HHHHHHHHHT-SSHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAa 21 
                 ll  l +l  D+s++VR+ ++
  KHJ33987.1 229 LLQRLFQLSVDKSADVRRHVC 249
                 688999999*******87555 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 1
                 SHHHHHHHHHHHHHHHHC CS
        HEAT  13 speVReaAakaLgalaev 30 
                  ++ R+ +a aL  +a++
  KHJ33987.1 401 RWNLRKCSAAALDVFASN 418
                 6999*********99986 PP

  == domain 4  score: 23.1 bits;  conditional E-value: 4.8e-08
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHHCS CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalaevl 31 
                 +lP l+ +l++++++ ReaA++aLga+ae++
  KHJ33987.1 427 ILPYLMLNLKHNEWRYREAAVLALGAVAEGC 457
                 89***************************98 PP

  == domain 5  score: 18.6 bits;  conditional E-value: 1.4e-06
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 l+P l++ll D++p VR+ ++++Lg+ ++
  KHJ33987.1 468 LVPYLISLLDDSEPLVRQITCWTLGRYSS 496
                 79***********************9765 PP

  == domain 6  score: 1.2 bits;  conditional E-value: 0.51
                 HHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgal 27 
                 +lk + D + +V ea a a+++l
  KHJ33987.1 518 ILKKMLDRNKRVQEAGASAFAHL 540
                 566667*************9987 PP

  == domain 7  score: 9.0 bits;  conditional E-value: 0.0017
                 HHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   7 kllsDpspeVReaAakaLgalaev 30 
                  +++Dp+ +VR+++   Lg+ a++
  KHJ33987.1 709 FCMQDPANDVRQSSYALLGDCAKF 732
                 457*****************9986 PP

  == domain 8  score: -0.2 bits;  conditional E-value: 1.5
                 HHHHHHHHHHHH CS
        HEAT  16 VReaAakaLgal 27 
                 V e+Aa aLg+l
  KHJ33987.1 811 VLENAAIALGRL 822
                 7899******98 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.27     3e+02      15      75 ..      71     149 ..      63     170 .. 0.72
   2 !    8.0   0.0    0.0033       3.7       4      67 ..     192     267 ..     189     284 .. 0.70
   3 ?   -1.8   0.0       3.8   4.3e+03      60      77 ..     325     342 ..     299     347 .. 0.66
   4 !   22.8   0.0   7.8e-08   8.7e-05      26      87 ..     418     491 ..     396     492 .. 0.68
   5 !   24.2   0.0     3e-08   3.3e-05       4      67 ..     431     506 ..     428     538 .. 0.80
   6 ?    2.9   0.0      0.13   1.5e+02      31      67 ..     702     741 ..     676     764 .. 0.56
   7 ?    2.8   0.0      0.14   1.5e+02      36      68 ..     798     835 ..     771     840 .. 0.69

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.27
      HEAT_2  15 evrraairaLg..........rignp..ealpaLvell.ededpavRraaaeaLgai.......gdpealpaLkelldddd 75 
                  +r+aa+  L           r   +  ++++a v+l+ +d++   R  a + + +i       g p+ ++ L++l+ +d+
  KHJ33987.1  71 IIRAAAATMLKnnikenykniRT--EslDLIRATVPLVlQDKNNLMRNYAGNVITEIvtnggilGWPQIISELLALVGNDN 149
                 57899999999866666653333..24488999999888999999999888888766555433355888888888877665 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.0033
      HEAT_2   4 LlqalendpdpevrraairaLg......rignp.......ealpaLvellededpavRraaaeaLg...aigdpealpaL 67 
                 L+++     +p++r  a+ ++           +       e+l+ L++l  d++++vRr+++ + +   +i+ ++  p+ 
  KHJ33987.1 192 LISFT-YNNNPKIRSLALSTINlflplaP---QallssldELLQRLFQLSVDKSADVRRHVCCSFVhivEIQPEKIMPHI 267
                 66666.67889999999999995553330...3555555588******************99665422255555555555 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 3.8
      HEAT_2  60 dpealpaLkelldddddd 77 
                 ++ +++ Lk ++dd d+d
  KHJ33987.1 325 SDNDIAMLKNRADDADED 342
                 455666677777665554 PP

  == domain 4  score: 22.8 bits;  conditional E-value: 7.8e-08
      HEAT_2  26 rignp...ealpaLvellededpavRraaaeaLgaig..........dpealpaLkellddddddvvReaAaeaL 87 
                 +++ p   ++lp+L   l++ +++ R+aa+ aLga++          +p+ +p L  ll dd++++vR+ + ++L
  KHJ33987.1 418 NFRAPvfdTILPYLMLNLKHNEWRYREAAVLALGAVAegcldivtphLPDLVPYLISLL-DDSEPLVRQITCWTL 491
                 44444555778888888999999999999999998854455455444699999999877.578888898777666 PP

  == domain 5  score: 24.2 bits;  conditional E-value: 3e-08
      HEAT_2   4 LlqalendpdpevrraairaLg..........rignpealpaLvellededpavRraaaeaLgaigd...pealpaL 67 
                 L+  l ++ ++  r aa+ aLg          + + p+++p+L++ll+d++p vR+  +++Lg++ +   + + paL
  KHJ33987.1 431 LMLNL-KHNEWRYREAAVLALGavaegcldivTPHLPDLVPYLISLLDDSEPLVRQITCWTLGRYSSwasSLNTPAL 506
                 55557.8999************77777774433345599************************98643114444555 PP

  == domain 6  score: 2.9 bits;  conditional E-value: 0.13
      HEAT_2  31 ealpaLvellededpavRraaaeaLgaigd...pealpaL 67 
                 +++++L  +++d+  +vR+     Lg ++    p+  p L
  KHJ33987.1 702 SIFDLLNFCMQDPANDVRQSSYALLGDCAKfvfPQLRPCL 741
                 4455555555777777777777777766532223332222 PP

  == domain 7  score: 2.8 bits;  conditional E-value: 0.14
      HEAT_2  36 Lvelleded..pavRraaaeaLgaigdpe...alpaLk 68 
                  +++le+++  + v ++aa aLg++g++     +p+L+
  KHJ33987.1 798 YLQILENPEvpRSVLENAAIALGRLGLENfdlMAPHLA 835
                 45566665543458889999999999865333456665 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       1.7   1.9e+03      23      54 ..      94     125 ..      72     133 .. 0.68
   2 !   12.2   0.0   0.00019      0.22      21      73 ..     222     274 ..     156     290 .. 0.67
   3 ?   -1.1   0.0       2.7   3.1e+03      19      41 ..     305     327 ..     300     331 .. 0.78
   4 !   10.2   0.0   0.00076      0.86       2      88 ..     442     533 ..     441     540 .. 0.82
   5 ?    1.8   0.0      0.32   3.6e+02      21      54 ..     507     540 ..     490     570 .. 0.71
   6 ?   -2.8   0.0       8.7   9.8e+03      10      76 ..     623     648 ..     595     655 .. 0.63
   7 ?    1.3   0.0      0.47   5.3e+02      67      90 ..     701     724 ..     683     752 .. 0.84
   8 ?   -1.7   0.0       4.1   4.6e+03      16      42 ..     823     851 ..     812     895 .. 0.59
   9 ?   -1.9   0.0       4.6   5.2e+03      44      77 ..     878     911 ..     850     921 .. 0.69

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.7
  Vac14_Fab1_bd  23 eyleeivkpvlkcfsDkdsrvRyyacEslyni 54 
                    e l+ i ++v  +++Dk++ +R ya   +  i
     KHJ33987.1  94 ESLDLIRATVPLVLQDKNNLMRNYAGNVITEI 125
                    44555556666788999999999998776655 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 0.00019
  Vac14_Fab1_bd  21 ikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdal 73 
                    + + l+e+++ +++   Dk++ vR ++c s+  i+ +  ++++ +++ + d++
     KHJ33987.1 222 LLSSLDELLQRLFQLSVDKSADVRRHVCCSFVHIVEIQPEKIMPHITGLVDYM 274
                    44556666666777777777777777777777777777777777766666665 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 2.7
  Vac14_Fab1_bd  19 kkikeyleeivkpvlkcfsDkds 41 
                    k +++yl++i++++l+++  +d+
     KHJ33987.1 305 KCLAPYLNKIIPVLLESMVYSDN 327
                    5578999******9999876665 PP

  == domain 4  score: 10.2 bits;  conditional E-value: 0.00076
  Vac14_Fab1_bd   2 arkggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakva...kgevlk..llneifdalvklvaDsdesvksga 88 
                    +r++++++L ava +    ++++l ++v+ +++ ++D++  vR  +c +l   +  a   ++ +l+  +++ + +++ k + D ++ v+++ 
     KHJ33987.1 442 YREAAVLALGAVAEGCLDIVTPHLPDLVPYLISLLDDSEPLVRQITCWTLGRYSSWAsslNTPALRsqFFEPMMEGILKKMLDRNKRVQEAG 533
                    68999******************************************999555444300144555444889999999999999999999864 PP

  == domain 5  score: 1.8 bits;  conditional E-value: 0.32
  Vac14_Fab1_bd  21 ikeyleeivkpvlkcfsDkdsrvRyyacEslyni 54 
                     ++++e +++ +lk + D+++rv    + ++  +
     KHJ33987.1 507 RSQFFEPMMEGILKKMLDRNKRVQEAGASAFAHL 540
                    4678888999999999999999875555555555 PP

  == domain 6  score: -2.8 bits;  conditional E-value: 8.7
  Vac14_Fab1_bd  10 LaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvkl 76 
                    L  +a al+++ +++ + i +                                           +k+
     KHJ33987.1 623 LSYIATALGETFAPFAQPIFQ-----------------------------------------RCIKI 648
                    444555555554444444444.........................................44443 PP

  == domain 7  score: 1.3 bits;  conditional E-value: 0.47
  Vac14_Fab1_bd  67 neifdalvklvaDsdesvksgael 90 
                     +ifd l   + D  ++v++++  
     KHJ33987.1 701 PSIFDLLNFCMQDPANDVRQSSYA 724
                    579999999999999999998754 PP

  == domain 8  score: -1.7 bits;  conditional E-value: 4.1
  Vac14_Fab1_bd  16 alekk..ikeyleeivkpvlkcfsDkdsr 42 
                    +le+   ++++l +i ++ lkc++  d  
     KHJ33987.1 823 GLENFdlMAPHLASIAESFLKCIQNVDYN 851
                    34443667888889999999999887754 PP

  == domain 9  score: -1.9 bits;  conditional E-value: 4.6
  Vac14_Fab1_bd  44 RyyacEslyniakvakgevlkllneifdalvklv 77 
                    R++++ + y i     + +++ l++i + ++ l+
     KHJ33987.1 878 RFFTAIAKYKIDESFDTVLMSDLKQIIQHIIALY 911
                    6666666666666666666666666666555544 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.026        29      65     131 ..     105     172 ..      68     177 .. 0.57
   2 ?    4.5   0.0     0.029        32      16      52 ..     223     261 ..     187     287 .. 0.47
   3 !   12.0   0.0   0.00015      0.16      21     121 ..     467     576 ..     443     617 .. 0.74
   4 ?    2.1   0.0      0.16   1.8e+02      59      87 ..     703     731 ..     683     761 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.026
        Cnd1  65 klleDenprVvanalaalteiseksenaiynllpdiisklsd....alnecsewgqitilefLlsyipkdk 131
                   l+D+n+  ++ a +++tei ++++   +   p+iis l++    +   ++ ++q   +++L++  +++k
  KHJ33987.1 105 LVLQDKNNLMRNYAGNVITEIVTNGG---ILGWPQIISELLAlvgnDNGIITSEAQEGAMTALSKICEDNK 172
                 44566666666666666666666652...223344444444422213233666666666666666555554 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.029
        Cnd1  16 pnlveylvepLrkrLkDedpyVRktaaivvakL..ilnd 52 
                  + +++l+++L +   D+++ VR++    + ++  i+++
  KHJ33987.1 223 LSSLDELLQRLFQLSVDKSADVRRHVCCSFVHIveIQPE 261
                 223444455555555555555555555544444333333 PP

  == domain 3  score: 12.0 bits;  conditional E-value: 0.00015
        Cnd1  21 ylvepLrkrLkDedpyVRktaaivvakL.....ilndmvkekg....flselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalne 110
                  lv+ L + L D++p VR+ +  ++ +       ln+    ++    +++ ++k + D n+rV++   +a+  + ek++  i++  + ii++++ + ++
  KHJ33987.1 467 DLVPYLISLLDDSEPLVRQITCWTLGRYsswasSLNTPALRSQffepMMEGILKKMLDRNKRVQEAGASAFAHLEEKASLSIISYCQPIIQQFVLCFES 565
                 578899999****************99999888555555555511123344455568********************9999*********999987666 PP

        Cnd1 111 csewgqitile 121
                  +  +    ++
  KHJ33987.1 566 YKDRNMFILYD 576
                 55555444444 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.16
        Cnd1  59 flselaklleDenprVvanalaalteise 87 
                 +++ l+ +++D+ + V++++ a+l ++++
  KHJ33987.1 703 IFDLLNFCMQDPANDVRQSSYALLGDCAK 731
                 56777889999999999999999988776 PP

>> MMS19_C  RNAPII transcription regulator C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.2     0.024        26     327     418 ..     182     272 ..     138     276 .. 0.69
   2 ?    3.3   0.0     0.032        36     368     390 ..     307     329 ..     304     336 .. 0.89
   3 !   10.1   0.0   0.00028      0.31     329     392 ..     423     485 ..     422     524 .. 0.87
   4 !    5.8   0.1    0.0056       6.3      31     141 ..     590     697 ..     587     753 .. 0.74
   5 ?   -0.8   0.0      0.58   6.5e+02     385     422 ..     802     843 ..     735     844 .. 0.52

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.024
     MMS19_C 327 QrfFstvlpklvegfkssdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdae.vkastLetlksileespslvsehlssLvp 418
                 Qr  + ++p+l++   ++++++++  L  + + l   P++ ll+ L +Ll  L q L++++++ v++ +   +  i+e +p+ + +h+  Lv 
  KHJ33987.1 182 QRPLTVIIPRLISFTYNNNPKIRSLALSTINLFLPLAPQA-LLSSLDELLQRLFQ-LSVDKSAdVRRHVCCSFVHIVEIQPEKIMPHITGLVD 272
                 6666777777777777777777777777777777766654.45667777777766.4444333366666666666666556666666666665 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.032
     MMS19_C 368 llpeLptLlPlLlqaLdlpdaev 390
                 l p+L++++P+Ll+++  +d+++
  KHJ33987.1 307 LAPYLNKIIPVLLESMVYSDNDI 329
                 789*************9999986 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.00028
     MMS19_C 329 fFstvlpklvegfkssdsetkenyLvALshllkhvPkslllpeLptLlPlLlqaLdlpdaevka 392
                 +F+t+lp+l+ + k ++   +e+   AL  + +    ++++p+Lp+L+P L+  Ld +++ v++
  KHJ33987.1 423 VFDTILPYLMLNLKHNEWRYREAAVLALGAVAEG-CLDIVTPHLPDLVPYLISLLDDSEPLVRQ 485
                 79**************************988666.589**************999988888775 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.0056
     MMS19_C  31 sekqlfetlvirllnkldlvlksnessaayahailstllkllekkqtdlekeellnsyydrivprlltlvvsaastss.......siltddrllevlgr 122
                 s++q+++ l++ l+ + + v++++ +     + + ++l ++ ++        e  + +++ i +r+++ + ++ ++s         ++ ++ +l +  +
  KHJ33987.1 590 SQPQIVDLLMPALIRRWNRVHDQSRE----IFPLFECLSYIATALG------ETFAPFAQPIFQRCIKIIHQNLEESLaasnnpnLDEPEKDFLVTSLD 678
                 479****************9999876....8888888888888866......2334555555555555544433322233345568889999999**** PP

     MMS19_C 123 iinlivrslssskqqevle 141
                 ++++i++ l++++  ++++
  KHJ33987.1 679 LLSAIIQALDAQQSASLIS 697
                 ***********99877765 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 0.58
     MMS19_C 385 lpdaevkastLetlksile....espslvsehlssLvprLLk 422
                 l+++ev +s+Le  +++l     e+ +l+++hl+s+ +++Lk
  KHJ33987.1 802 LENPEVPRSVLENAAIALGrlglENFDLMAPHLASIAESFLK 843
                 233446666666666666556666677777777777777776 PP

>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.7   9.8e-06     0.011       1      70 [.      32     105 ..      32     123 .. 0.76
   2 ?   -3.3   0.0         8     9e+03      11      26 ..     465     480 ..     464     487 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 9.8e-06
                 HHHHHHHHHCSTCHHHHHHHHHHC.......TTSHHH...HHHHHHHHHHHHHHHHGGSCCCHCGSXHHHHHHHHHHHHH CS
       IBN_N   1 AekqLkqlekqpgflsallqilan.......sesele...vRqlAalyLknlitkhWsdeeekqslpseekeqIrnnlln 70 
                 Ae  L++++++p+ +++l +++++       s +++e   +R +Aa++Lkn+i+ +++      ++  e  ++Ir ++  
  KHJ33987.1  32 AEAVLQKAKSSPDLNNYLTFLFTSsqpltgmSYNPEEyhiIRAAAATMLKNNIKENYK------NIRTESLDLIRATVPL 105
                 788999999999999999999999544444422342223389****************......8888777777776654 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 8
                 STCHHHHHHHHHHCTT CS
       IBN_N  11 qpgflsallqilanse 26 
                 +p+ +++l+++l +se
  KHJ33987.1 465 LPDLVPYLISLLDDSE 480
                 699999****999986 PP

>> HEAT_PBS  PBS lyase HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.46   5.1e+02      10      24 ..     130     144 ..     130     147 .. 0.88
   2 ?    6.6   0.0     0.014        15       2      27 .]     443     478 ..     442     478 .. 0.94
   3 ?   -1.7   0.0       6.5   7.3e+03      13      25 ..     590     602 ..     577     603 .. 0.82
   4 ?    3.5   0.0      0.13   1.5e+02       2      14 ..     812     824 ..     811     840 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.46
                 HHCTSGGGHHHHHHH CS
    HEAT_PBS  10 gqlgdeeaipaLlea 24 
                 g lg++++i  Ll++
  KHJ33987.1 130 GILGWPQIISELLAL 144
                 679*********987 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.014
                 HHHHHHHHHHCTS..........GGGHHHHHHHCTC CS
    HEAT_PBS   2 RraAakaLgqlgd..........eeaipaLleaLqd 27 
                 R aA+ aLg++            ++ +p L+ +L+d
  KHJ33987.1 443 REAAVLALGAVAEgcldivtphlPDLVPYLISLLDD 478
                 99***********99999999999999999999997 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 6.5
                 TSGGGHHHHHHHC CS
    HEAT_PBS  13 gdeeaipaLleaL 25 
                   ++++++L+ aL
  KHJ33987.1 590 SQPQIVDLLMPAL 602
                 45999****9988 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.13
                 HHHHHHHHHHCTS CS
    HEAT_PBS   2 RraAakaLgqlgd 14 
                   +Aa aLg+lg 
  KHJ33987.1 812 LENAAIALGRLGL 824
                 578********96 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.41   4.6e+02      13      36 ..     188     211 ..     186     211 .. 0.92
   2 ?   -2.7   0.0       6.1   6.9e+03      21      33 ..     236     249 ..     221     255 .. 0.53
   3 !   10.2   0.0   0.00055      0.62      14      38 ..     469     493 ..     463     496 .. 0.90
   4 ?   -2.6   0.0       5.9   6.7e+03      27      37 ..     810     820 ..     792     822 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.41
                 HHHHHHHHTTTSSHHHHHHHHHHH CS
         Arm  13 avppLvrLLssedeevqeeAawAL 36 
                 ++p+L+++ ++ +++++  A++++
  KHJ33987.1 188 IIPRLISFTYNNNPKIRSLALSTI 211
                 69***************9999886 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 6.1
                 TT.TSSHHHHHHHH CS
         Arm  21 Ls.sedeevqeeAa 33 
                 Ls +++ +v++ ++
  KHJ33987.1 236 LSvDKSADVRRHVC 249
                 22456666666666 PP

  == domain 3  score: 10.2 bits;  conditional E-value: 0.00055
                 HHHHHHHTTTSSHHHHHHHHHHHHH CS
         Arm  14 vppLvrLLssedeevqeeAawALsN 38 
                 vp L++LL++  + v++  +w+L+ 
  KHJ33987.1 469 VPYLISLLDDSEPLVRQITCWTLGR 493
                 99*********************86 PP

  == domain 4  score: -2.6 bits;  conditional E-value: 5.9
                 HHHHHHHHHHH CS
         Arm  27 evqeeAawALs 37 
                 +v+e+Aa AL+
  KHJ33987.1 810 SVLENAAIALG 820
                 89999998887 PP

>> DUF3437  Domain of unknown function (DUF3437)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0      0.03        34       4      47 ..     443     487 ..     441     496 .. 0.83
   2 ?    6.0   0.0    0.0098        11       4      40 ..     854     890 ..     851     910 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.03
     DUF3437   4 rhaavlglsAlvlafpydvPkwlpevleeLaraardpap.irktv 47 
                 r aavl+l+A+ + +   v ++lp+++  L +   d++p +r+  
  KHJ33987.1 443 REAAVLALGAVAEGCLDIVTPHLPDLVPYLISLLDDSEPlVRQIT 487
                 679*************************99999999885266554 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0098
     DUF3437   4 rhaavlglsAlvlafpydvPkwlpevleeLaraardp 40 
                 +  a  g + +vla+p  + k lp+ ++++a+++ d+
  KHJ33987.1 854 KATAFKGFCLIVLANPQAMEKDLPRFFTAIAKYKIDE 890
                 66777899***********************977665 PP

>> Tti2  Tti2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1      0.79   8.8e+02     118     161 ..     182     224 ..     161     235 .. 0.83
   2 ?    0.5   0.0      0.33   3.6e+02      49      71 ..     346     366 ..     329     413 .. 0.75
   3 ?    7.7   0.0     0.002       2.2      92     147 ..     438     491 ..     431     523 .. 0.85
   4 ?   -1.3   0.0       1.1   1.3e+03      90     132 ..     665     707 ..     639     763 .. 0.63
   5 ?    0.1   0.0      0.41   4.6e+02     187     279 ..     690     807 ..     665     809 .. 0.58

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.79
        Tti2 118 eanwplivPpiLnllDdtdtsvKlrGlklLqtlleklesskllk 161
                 ++ + +i+P +++   +++++++  +l+ ++ +l   +++ ll+
  KHJ33987.1 182 QRPLTVIIPRLISFTYNNNPKIRSLALSTINLFLPLAPQA-LLS 224
                 4678899***************************999998.664 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.33
        Tti2  49 sklrplfsksspktpkitaaGrk 71 
                 + +rp fsk  +k++k++++G  
  KHJ33987.1 346 EDIRPTFSK--SKSSKNNSKGMD 366
                 579******..444456666654 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.002
        Tti2  92 kpWksgdlkaisvlawiirqlqskeieanwplivPpiLnllDdtdtsvKlrGlklL 147
                  +W++++  ++++ a++   l+  +   ++p +vP +++llDd+++ v+   +  L
  KHJ33987.1 438 NEWRYREAAVLALGAVAEGCLDIVT--PHLPDLVPYLISLLDDSEPLVRQITCWTL 491
                 5688888888888888877787776..89********************9888766 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 1.1
        Tti2  90 srkpWksgdlkaisvlawiirqlqskeieanwplivPpiLnll 132
                   +p k   + ++++l+ ii+ l+ ++  + ++   P i  ll
  KHJ33987.1 665 LDEPEKDFLVTSLDLLSAIIQALDAQQSASLISTSQPSIFDLL 707
                 4445555556666666666666666654555555555555544 PP

  == domain 5  score: 0.1 bits;  conditional E-value: 0.41
        Tti2 187 eeSlklLraaYpallsLaklefaekske................................rrklldkilregilsglshases.prlvellleqlsevv 252
                 ++S +l++++ p ++ L++   ++ +++                                ++ +ld+il e        ++e   ++v+  +  + e+ 
  KHJ33987.1 690 QQSASLISTSQPSIFDLLNFCMQDPANDvrqssyallgdcakfvfpqlrpcldkllpilvKQLELDDILDE--------QAEIeFSVVNNTCWSAGEIA 780
                 55555555555555555555555444445555555555555555555444333333333333333333333........33333567777777777777 PP

        Tti2 253 eelgistvkhLkrlipllseilsnPfi 279
                  + g+ +  ++++l++ + +il+nP +
  KHJ33987.1 781 IQYGKGMALYVQKLMKRYLQILENPEV 807
                 777888888888888888888888865 PP

>> RIX1  rRNA processing/ribosome biogenesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       7.1   7.9e+03      64     115 ..      75     126 ..      73     128 .. 0.63
   2 ?   -2.1   0.1       2.4   2.7e+03     131     148 ..     184     204 ..     134     233 .. 0.48
   3 ?   -1.5   0.0       1.5   1.7e+03     100     125 ..     219     244 ..     197     257 .. 0.70
   4 ?   -3.3   0.0       5.7   6.3e+03      57      96 ..     279     319 ..     277     329 .. 0.70
   5 ?    5.1   0.0     0.015        17     127     156 ..     459     488 ..     428     503 .. 0.81
   6 ?    1.1   0.2      0.26   2.9e+02     128     159 ..     633     684 ..     619     691 .. 0.74
   7 ?    4.8   0.0     0.018        20      83     163 ..     790     869 ..     778     893 .. 0.73
   8 ?   -3.3   0.0       5.7   6.4e+03     132     147 ..     899     914 ..     895     927 .. 0.63

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 7.1
        RIX1  64 aGvcLakvtveesgeellssgstWlrallsiLekpdppavlelaistlsrif 115
                 a+++++k  + e+++ + +++  ++ra ++++ + +  ++ + a ++++ i 
  KHJ33987.1  75 AAATMLKNNIKENYKNIRTESLDLIRATVPLVLQDKNNLMRNYAGNVITEIV 126
                 5666666666677777777777777777777766666666666666666665 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.4
        RIX1 131 pnlpkfitallqlleee....l 148
                 p l+ +i+ l++   ++     
  KHJ33987.1 184 P-LTVIIPRLISFTYNNnpkiR 204
                 2.44444555544444444442 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.5
        RIX1 100 ppavlelaistlsriftltrgkptlt 125
                 p+a+l+++ ++l+r+f+l  +k++ +
  KHJ33987.1 219 PQALLSSLDELLQRLFQLSVDKSADV 244
                 56667777777777777777776544 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 5.7
        RIX1  57 kspegrwaGvcLakvtveesg.eellssgstWlrallsiLe 96 
                 +++e+  +++  a  + +++    l+++ +++l++++++L 
  KHJ33987.1 279 RNAEDEDLACDAAEFWLTVGEqPKLVKCLAPYLNKIIPVLL 319
                 56666667777777777777777777777888888777764 PP

  == domain 5  score: 5.1 bits;  conditional E-value: 0.015
        RIX1 127 Eiltpnlpkfitallqlleeeletvleals 156
                 +i+tp+lp +++ l++ll+++  +v ++ +
  KHJ33987.1 459 DIVTPHLPDLVPYLISLLDDSEPLVRQITC 488
                 589999999999999999966444444444 PP

  == domain 6  score: 1.1 bits;  conditional E-value: 0.26
        RIX1 128 iltpnlpkfitallqlleee....................letvlealstll 159
                    p ++ +++ ++++++++                    l t l++ls+++
  KHJ33987.1 633 TFAPFAQPIFQRCIKIIHQNleeslaasnnpnldepekdfLVTSLDLLSAII 684
                 5568889999999999998866666666666666666666666666666666 PP

  == domain 7  score: 4.8 bits;  conditional E-value: 0.018
        RIX1  83 sgstWlrallsiLekp.dppavlelaistlsriftltrgkptltREiltpnlpkfitallqlleee.....letvlealstllplhP 163
                 + ++++++ l+iLe+p  p++vle a ++l r+      + ++  ++  p+l ++++++l+ +++        t+++ ++ ++ ++P
  KHJ33987.1 790 YVQKLMKRYLQILENPeVPRSVLENAAIALGRLG-----LENF--DLMAPHLASIAESFLKCIQNVdynyeKATAFKGFCLIVLANP 869
                 6788999999******888999999999999983.....3333..355666666666666666644666666666666666666666 PP

  == domain 8  score: -3.3 bits;  conditional E-value: 5.7
        RIX1 132 nlpkfitallqlleee 147
                  l+++i+++++l ++ 
  KHJ33987.1 899 DLKQIIQHIIALYKSL 914
                 5888999999988833 PP

>> BP28CT  BP28CT (NUC211) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00036       0.4      80     148 ..     613     688 ..     603     692 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00036
                 -HHH.HHHHHHHHHH--------TTHHHHHHHHHHHHH-----.----HH................HHHHHHHHHH CS
      BP28CT  80 eRli.tfykllnklaekLkslftsYasyllenavelLkalnek.seeskekkkkk.....eekkveLlrlvlstLt 148
                 +R i  +++ l  +a++L + f ++a+ +++ ++++++++ e+  ++s++ + ++       ++ +Ll++++++L+
  KHJ33987.1 613 SREIfPLFECLSYIATALGETFAPFAQPIFQRCIKIIHQNLEEsLAASNNPNLDEpekdfLVTSLDLLSAIIQALD 688
                 44441599999**************************999444133333333333566668889999999999996 PP

>> TAF6_C  TAF6 C-terminal HEAT repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.18     2e+02      20      71 ..      70     122 ..      49     126 .. 0.72
   2 ?    5.2   0.0     0.024        27      14      38 ..     396     420 ..     362     432 .. 0.85
   3 ?   -2.9   0.0         8   8.9e+03      33      80 ..     779     826 ..     777     834 .. 0.76

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.18
      TAF6_C  20 waLRdfAAslLak.ilkkysssyktLkprvtrtllkvlldpkkslgtlyGall 71 
                   +R  AA +L++ i ++y+++ ++    +  t+  vl+d+++ + ++ G ++
  KHJ33987.1  70 HIIRAAAATMLKNnIKENYKNIRTESLDLIRATVPLVLQDKNNLMRNYAGNVI 122
                 56899999999852566777777766667777777778888888888877765 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.024
      TAF6_C  14 seledhwaLRdfAAslLakilkkys 38 
                 ++ ed w+LR+ +A  L+  ++++ 
  KHJ33987.1 396 QSPEDRWNLRKCSAAALDVFASNFR 420
                 455778************9999986 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 8
      TAF6_C  33 ilkkysssyktLkprvtrtllkvlldpkkslgtlyGallglaalGeea 80 
                 i+ +y++  +   +++++ +l++l +p+ + ++l  a ++l  lG e 
  KHJ33987.1 779 IAIQYGKGMALYVQKLMKRYLQILENPEVPRSVLENAAIALGRLGLEN 826
                 666777777777889999999999999888888888888888887665 PP

>> Importin_rep_4  Importin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.2   0.00012      0.14      18      67 ..     296     346 ..     282     352 .. 0.74
   2 ?   -1.4   3.2       2.6     3e+03      46      68 ..     378     400 ..     375     418 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00012
  Importin_rep_4  18 tlaenaPkmvrkeaefteklvvqvLslmteveddee..Watsddlddddeed 67 
                     t+ e +Pk+v+  a + +k+++++L+ m   ++d     + +dd+d+dd  +
      KHJ33987.1 296 TVGE-QPKLVKCLAPYLNKIIPVLLESMVYSDNDIAmlKNRADDADEDDRVE 346
                     5544.6*********************9877655441146677777777654 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 2.6
  Importin_rep_4  46 teveddeeWatsddlddddeede 68 
                     ++v+d ee +  dd+dd++  ++
      KHJ33987.1 378 SDVDDIEEGEIDDDDDDEQSPED 400
                     67777777766666666555444 PP

>> Rrp44_CSD1  Rrp44-like cold shock domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.021        23      22      73 ..      79     129 ..      66     165 .. 0.81
   2 ?    2.3   3.5      0.11   1.2e+02      85     108 ..     372     397 ..     355     404 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.021
                 EEEEEEEEESSBTTEEEEE-SSSSS-EEEESHHHHTS--TT-EEEEEE--GG CS
  Rrp44_CSD1  22 lyqgniqiseynflegsvslprfskpvlivgqknlnrafngdqvivellpqs 73 
                 + + ni+    n+   s+ l r + p+++  ++nl r + g+ vi e++ + 
  KHJ33987.1  79 MLKNNIKENYKNIRTESLDLIRATVPLVLQDKNNLMRNYAGN-VITEIVTNG 129
                 5677888888899999***********************996.788887665 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.11
                 CCCSSTT--TT-B--..SSS--SSSS CS
  Rrp44_CSD1  85 sehfdvndnpdieag..ddddnness 108
                 +e++d+ d  die g  dddd++e s
  KHJ33987.1 372 AEKIDISDVDDIEEGeiDDDDDDEQS 397
                 6899*********9955566666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (940 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.83u 0.27s 00:00:01.10 Elapsed: 00:00:00.43
# Mc/sec: 6518.39
//
Query:       KHJ33988.1  [L=557]
Description: putative c6 zinc finger domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.4e-08   33.9  14.5      4e-08   33.3  14.5    1.3  1  Zn_clus         Fungal Zn(2)-Cys(6) binuclear cluster domain
    2.6e-06   26.5   0.4    4.8e-06   25.6   0.4    1.3  1  Fungal_trans_2  Fungal specific transcription factor domain
  ------ inclusion threshold ------
      0.078   13.5   0.2       0.27   11.8   0.1    1.9  2  STIMATE         STIMATE family


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3  14.5   6.7e-12     4e-08       2      34 ..      19      50 ..      18      54 .. 0.92

  Alignments for each domain:
  == domain 1  score: 33.3 bits;  conditional E-value: 6.7e-12
                S-HHHHHCT---STSSSS-HHHHHCTHHHCCCC CS
     Zn_clus  2 aCdnCrkkKvKCdakkPaCsnCkklnleCtfys 34
                +Cd+C++++++Cd+++P+C+nC k+n+ C  y+
  KHJ33988.1 19 GCDTCKRRHIRCDENFPQCRNCTKHNCRCP-YM 50
                7****************************8.54 PP

>> Fungal_trans_2  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.6   0.4     8e-10   4.8e-06      28     127 ..     142     233 ..     138     248 .. 0.87

  Alignments for each domain:
  == domain 1  score: 25.6 bits;  conditional E-value: 8e-10
  Fungal_trans_2  28 llplalsnkallhallalsafhlqskgpkdslereakrykslalkelqealaelsstlsrnekykdiLaaiLllcsieissgdvsdwrvhLeaat 122
                     +l++ +++ +++halla++a+hl+ + + +   + a+ ++  a+++l ea+   s++ s     ++iLaa +ll + e  +     w + ++++ 
      KHJ33988.1 142 FLKIGINHGFVMHALLAIAATHLSWLTKCSLAASMAYEHRGIAMTGLHEAIGSFSRNNS-----DAILAASILLSWQENDWRG---WMQLIQGTS 228
                     778888999**************77777777899999**********************.....******9888888766666...999999998 PP

  Fungal_trans_2 123 sliks 127
                     s+i  
      KHJ33988.1 229 SVIDA 233
                     88865 PP

>> STIMATE  STIMATE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   4.6e-05      0.27      35      95 ..     119     178 ..     105     186 .. 0.87
   2 ?   -2.3   0.0         1     6e+03      33      60 ..     389     416 ..     377     421 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.6e-05
     STIMATE  35 leslesGnYgkpkalsawlkqllvyllilvlmKlvvllllllfeevlakvaellLswlesn 95 
                   s+e G+Y+   ++++w +q+ ++l i +   +v+ +ll+++ + l++++++ L+ +  +
  KHJ33988.1 119 SISIELGQYNAN-KFTLWTRQIPLFLKIGINHGFVMHALLAIAATHLSWLTKCSLAASMAY 178
                 55799****998.6*************************************9999887655 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1
     STIMATE  33 lkleslesGnYgkp.kalsawlkqllvyl 60 
                    + ++s++Y++p + l+  l++++ y 
  KHJ33988.1 389 IARQLISSSSYQSPgN-LTSSLIDMIKYP 416
                 5567889999999955.888888877775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (557 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.20s 00:00:00.76 Elapsed: 00:00:00.38
# Mc/sec: 4398.54
//
Query:       KHJ33989.1  [L=319]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.3e-17   61.5   0.0    1.3e-16   61.0   0.0    1.2  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.0   0.0     7e-21   1.3e-16       1     127 [.     200     318 ..     200     319 .] 0.84

  Alignments for each domain:
  == domain 1  score: 61.0 bits;  conditional E-value: 7e-21
       RVT_2   1 ktyrlvslPkdrkaigsrWvftkkkddlkevkykarlvaqGfsq.kagedydevfaPvirldsvrLllalaaeeelvvhqldvdsafLnaeldeevyvk 98 
                 ++++lv   + +     + ++ +k+    +++ kar  a+Gfs   a+  y +v  P     ++r+l alaa  +l + ++d+  +fL+ae+d ++y+ 
  KHJ33989.1 200 NVWTLVPRSEAKD-KVMTVIWSLKE--NPDGQLKARWCARGFSEpYANNTYADVLPP----TTMRMLFALAASRNLNISHVDITVSFLHAEIDTPLYIE 291
                 5788887654433.33445566664..579************973678888888777....579*********************************** PP

       RVT_2  99 qPpGfeidreeekvykLnkslyGlkqapl 127
                 qP G e     + ++kL+k + Glk ap+
  KHJ33989.1 292 QPHGREKP--GNLICKLKKLIDGLKTAPR 318
                 ****9877..899**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2223.95
//
Query:       KHJ33990.1  [L=566]
Description: putative phosphoribosylpyrophosphate amidotransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-14   53.9   0.0    4.4e-14   52.8   0.0    1.6  1  GATase_6      Glutamine amidotransferase domain
    1.8e-11   44.0   0.0    3.5e-11   43.1   0.0    1.5  1  GATase_7      Glutamine amidotransferase domain
    1.6e-08   34.2   0.0    3.8e-08   33.0   0.0    1.5  1  Pribosyltran  Phosphoribosyl transferase domain
    0.00087   18.3   0.0     0.0019   17.2   0.0    1.5  1  GATase_4      Glutamine amidotransferases class-II


Domain annotation for each model (and alignments):
>> GATase_6  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   0.0   9.9e-18   4.4e-14      13     125 ..      66     204 ..      54     220 .. 0.75

  Alignments for each domain:
  == domain 1  score: 52.8 bits;  conditional E-value: 9.9e-18
    GATase_6  13 e.........valaHvRlaivglaeeegaqPf.psedgrlllvhNGeiynykelreelpalkglafrsrsDtevllall....eelG............ 85 
                 +         ++l+H R  + g +++++aqPf +++  +++++hNG   n++elr  l +++ ++++++sD+e++l++l    + +G            
  KHJ33990.1  66 GsrvqnlpgfMGLGHLRYPTAGSSASAEAQPFyVNSPYGISFAHNGNLINADELRLYLDREAHRHINTDSDSELMLNILanelNVTGkarvneedifrs 164
                 334455555589************99999***9999999*********************99999************7767773333666666445555 PP

    GATase_6  86 .eevlerlrGmfafaiwdkrentlila.rdrlgvkplyyavd 125
                  e++++r++G+ a  ++  +  ++ l  rd  g++pl++++ 
  KHJ33990.1 165 lERMYDRCVGAWACTAML-AGFGI-LGfRDPYGIRPLVMGSR 204
                 555555555555543333.33334.445*********99876 PP

>> GATase_7  Glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.1   0.0   7.7e-15   3.5e-11       9     121 ..      90     224 ..      80     226 .. 0.85

  Alignments for each domain:
  == domain 1  score: 43.1 bits;  conditional E-value: 7.7e-15
    GATase_7   9 seagaQPmvssedgrlvivfnGeiyNykelreeLeakgh.rfrtksDtevllallea................ewgeealerlnGmfAfaiwdeeekrl 90 
                  +a+aQP++ ++   + +++nG + N +elr  L ++ h +++t+sD+e++l++l++                + +e++++r+ G +A   + +    +
  KHJ33990.1  90 ASAEAQPFYVNSPYGISFAHNGNLINADELRLYLDREAHrHINTDSDSELMLNILANelnvtgkarvneedifRSLERMYDRCVGAWACTAMLAGF-GI 187
                 56789****977777********************9988356*************999***************9**************99998877.79 PP

    GATase_7  91 llaRDrlGikPLyygedk...gd...allfaSelkal 121
                 l  RD++Gi+PL +g ++    d    +++aSe  al
  KHJ33990.1 188 LGFRDPYGIRPLVMGSRPsstLDgvvDYMMASESVAL 224
                 99*************9984331133355677777666 PP

>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   8.4e-12   3.8e-08      16     122 ..     299     408 ..     289     417 .. 0.77

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 8.4e-12
                   EETTEEEEEE--GGGEEEEEEETTTHHHHHHHHHHSTT-EE.-EEEEEE-TTT--EE..............EE----TTSEEEEE-SEESSSHHHHH CS
  Pribosyltran  16 arlaaeileeyngkpdvvvgiargGvpfakiladeLevpla.yvrkvkyrpdgseeaargssdes......rlledpagkkVliVDDildtGgTlla 105
                   + l +e+++    ++dv+++i+  + + a  la +L  p++    k +y   +    ++gs            ++++ag++Vl+VDD +  G+T ++
    KHJ33990.1 299 KTLGEELVK----EIDVIIPIPETSNTSAASLAERLQKPYCqGFVKNRYVFRTFIMPSQGSRTKAvrrklsAIPSEFAGRTVLLVDDSIVRGTTSRE 391
                   444444444....59*********************77755455555554444444444443333556666799*********************** PP

                   HHHHHHCC-BSEEEEEE CS
  Pribosyltran 106 alelLkekgpeevriav 122
                   ++   +e+g+++v++a 
    KHJ33990.1 392 IICMAREAGAKKVILAS 408
                   **************996 PP

>> GATase_4  Glutamine amidotransferases class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   4.2e-07    0.0019      76     165 ..      79     171 ..      69     184 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 4.2e-07
    GATase_4  76 aHiRkatqGevklenthpFvRelwgrewifAHnGdlkeykpkl....egrfePv.GsTDsElafCelleelasrfekaepsaeeleralaelake 165
                  H+R  t G+ + ++++pF  +     + fAHnG+l + ++ +    ++ ++ +  + DsEl++ +l +el+ +  ka+ + e+++r l+ + ++
  KHJ33990.1  79 GHLRYPTAGSSASAEAQPFYVN-SPYGISFAHNGNLINADELRlyldREAHRHInTDSDSELMLNILANELNVTG-KARVNEEDIFRSLERMYDR 171
                 6******************865.445688*******775544346563444444257899***********9998.6789999999999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       334  (0.018629); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.29s 00:00:00.84 Elapsed: 00:00:00.46
# Mc/sec: 3712.65
//
Query:       KHJ33991.1  [L=407]
Description: putative phosphoribosylaminoimidazole carboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-52  176.5   0.0    5.3e-52  175.8   0.0    1.3  1  ATP-grasp        ATP-grasp domain
    1.1e-15   57.0   0.3    2.3e-15   56.0   0.3    1.5  1  PurK_C           Phosphoribosylaminoimidazole carboxylase C-t
    0.00025   20.6   0.0    0.00055   19.5   0.0    1.6  1  Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
    0.00073   19.6   0.0      0.012   15.7   0.0    2.3  1  ATP-grasp_3      ATP-grasp domain
  ------ inclusion threshold ------
      0.088   12.2   0.0       0.17   11.2   0.0    1.5  1  2-Hacid_dh_C     D-isomer specific 2-hydroxyacid dehydrogenas


Domain annotation for each model (and alignments):
>> ATP-grasp  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.8   0.0   1.5e-55   5.3e-52       3     171 .]     126     302 ..     124     302 .. 0.90

  Alignments for each domain:
  == domain 1  score: 175.8 bits;  conditional E-value: 1.5e-55
                 TTT--B-EEEEECCH.HHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHCGTTCEEEEE----SEEEEEEEEE......ETTC-EEE-- CS
   ATP-grasp   3 klglpvprflavesk.eeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqalealkeekvivEefvpfekElsvlvvr......saeGetafyp 94 
                 ++g+++ +   + sk +el+ + + +g+p++vK+r+ +ydGkG++vv++++d e+ale+lk++ +++E++++f++El+++vv+      s   +t++yp
  KHJ33991.1 126 AHGVQTIEARPIGSKiDELQTTSQIFGFPFMVKSRKDAYDGKGNFVVKKSDDFEEALEVLKGKDLYAEKWADFQMELAIMVVKfeecvtSDTSATVAYP 224
                 566666666666554169*****************************************************************5554433444599*** PP

                 EEEEEEETTEEEEEEECEE.-SCHHHHHHHHHHHHHHHHHTSSEEEEEEEEEETTCTEEEEEEESS--GGGGGHHHHB CS
   ATP-grasp  95 vvetvqedgilrlsvapae.vsekaqkkaeeiakkiveeLggvGvfavElFvledgellvnElapRpHnsGhvtldaa 171
                 vvet+++d+i++l++apa+ vse++ +ka+e+a+k+v +L g G+f+vElF+l+dg l++nE+apRpHnsGh+t++a+
  KHJ33991.1 225 VVETIHRDNICHLVYAPAReVSEAIRQKAAELARKAVGSLWGRGIFGVELFLLKDGGLVINEIAPRPHNSGHYTIEAC 302
                 *****************9648899****************************************************98 PP

>> PurK_C  Phosphoribosylaminoimidazole carboxylase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.3   6.5e-19   2.3e-15       1      54 [.     334     390 ..     334     391 .. 0.87

  Alignments for each domain:
  == domain 1  score: 56.0 bits;  conditional E-value: 6.5e-19
      PurK_C   1 avMvNlLGedae....ekleellaipgahlHlYgKeearpgRKmGHitvvgdsaeele 54 
                 a+M+N+LG  ++       ++++++ +a lH+YgK+ +rpgRK+GH+tv++++++++e
  KHJ33991.1 334 AIMLNILGGISKtsheVLAQKAREMIDAGLHMYGKD-SRPGRKIGHVTVISNTMHQAE 390
                 89*******997665333344***************.****************99986 PP

>> Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   1.5e-07   0.00055      28     176 ..     144     291 ..     120     310 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 1.5e-07
                      HHHHHHHC-SSEEEEESSSS.TTTTEEEESSGGGHHHHHHHHHTT-SCEEEEE--.ESEEEEEEEEETSSCEEEEEEEEE-SSSSS-HHHHHC. CS
  Dala_Dala_lig_C  28 lekveeelgypvfVKpareG.SSvGvskveseeelkeaieeafkydekvlvEeai.egreievavlgneklevsevgeivvkkgfydyeakysd 119
                      l+   + +g+p +VK+ +      G   v+  ++++ea+e    +d     E++     e+ + v++ e+  +s + + v+   +  ++  ++ 
       KHJ33991.1 144 LQTTSQIFGFPFMVKSRKDAyDGKGNFVVKKSDDFEEALEVLKGKD--LYAEKWAdFQMELAIMVVKFEECVTSDTSATVAYPVVETIHRDNI- 234
                      5667788999999998765424579999999999999999887766..567999955668888888877666666666665555555555554. PP

                      TT-EEESS----HHHHHHHHHHHHHHHHHTT--SEEEEEEEEETTTEEEEEEEESS- CS
  Dala_Dala_lig_C 120 dkaqlevpaklekeveekiqelalkaykaldlrGlaRvDfflteegeivlnEvNtlP 176
                       +  +    ++++++++k  ela ka   l +rG+  v +fl ++g +v+nE+ + P
       KHJ33991.1 235 CHLVYAPAREVSEAIRQKAAELARKAVGSLWGRGIFGVELFLLKDGGLVINEIAPRP 291
                      333333445799*****************************************9887 PP

>> ATP-grasp_3  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   3.4e-06     0.012       2     159 ..     115     292 ..     114     294 .. 0.54

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 3.4e-06
                  TSHHHHHHHHTTT.S---.............-EESS--SSSEEEEESS-------B--SS--TTE......................EEEE---SEEE CS
  ATP-grasp_3   2 sdKlktykkLkeagvkvP.........tkleaeeleeeekklvvKprdGaggesvrvveekeeaeaaieeve...............lvqefieGkpl 75 
                  +dK++  + Lk++gv++          ++l+ ++  +    +v    d+ +g++++vv++ ++ e+a+e ++               l+   ++ +++
   KHJ33991.1 115 QDKYQQKQHLKAHGVQTIearpigskiDELQTTSQIFGFPFMVKSRKDAYDGKGNFVVKKSDDFEEALEVLKgkdlyaekwadfqmeLAIMVVKFEEC 212
                  57777777777777776444446544333333333333444444455677777777777776666555544444443333333322222222222221 PP

                  EEEEEE.SSSEEEEEEEEEEEET......................TEEEEEEES----HHHHHHHHHHHHHTTSTT--EEEEEEEE.ESS.SEEEEEE CS
  ATP-grasp_3  76 Svsllsdgekvlvlavnrqliekaeke..................fvyaGnvtpietelkeevvelaeevvekleglaGyvGvDlv.lkdeepyviEv 154
                    s                       +                  +vya     +e   ++++ ela+++v +l   +G++Gv+l  lkd+++++ E+
   KHJ33991.1 213 VTSDT---------------------SatvaypvvetihrdnichLVYAPAREVSE-AIRQKAAELARKAVGSL-WGRGIFGVELFlLKDGGLVINEI 287
                  11111.....................012222222233333444466665554444.5589999**********.889******75389999999*** PP

                  ESS-- CS
  ATP-grasp_3 155 NPRlt 159
                   PR+ 
   KHJ33991.1 288 APRPH 292
                  ***96 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   4.8e-05      0.17      36      97 ..       2      70 ..       1      81 [. 0.74

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4.8e-05
                  TSEEEEES-SHHHHHHHHHHHHTT-EEEEESSSHHHHH.......CHHHHTCEECSHHHHHHH-SEEEE CS
  2-Hacid_dh_C 36 gktvGiiGlGrIGqavakrlkafgmkviaydrskkkee.......eeeelgvelvsleellaesDivsl 97
                  ++t+G++G G++G+ + + ++++ +k+++ d   ++ +       + +    + +++ el ++ Di+++
    KHJ33991.1  2 DQTIGLLGGGQLGRMLCEAANSLSVKIVVLDAPFSPAKqvhscipHIDGSFTDPEKIRELARRVDIITV 70
                  68***************************9976665553444443333333355677777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       654  (0.0364772); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 2978.39
//
Query:       KHJ33992.1  [L=462]
Description: putative mrna capping enzyme [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.2e-54  182.4   0.4    8.2e-54  182.4   0.4    1.6  2  mRNA_cap_enzyme  mRNA capping enzyme, catalytic domain
    1.6e-33  115.6   1.1    3.1e-33  114.6   1.1    1.5  1  mRNA_cap_C       mRNA capping enzyme, C-terminal domain
    4.6e-08   32.9   0.4    9.4e-05   22.1   0.1    2.5  2  DNA_ligase_A_M   ATP dependent DNA ligase domain
     0.0012   19.2   0.2     0.0024   18.2   0.2    1.6  1  RNA_ligase       RNA ligase
  ------ inclusion threshold ------
      0.018   15.1   0.6       0.11   12.5   0.3    2.2  2  Erp_C            Erp protein C-terminus


Domain annotation for each model (and alignments):
>> mRNA_cap_enzyme  mRNA capping enzyme, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.4   0.4   2.3e-57   8.2e-54       1     195 []      40     235 ..      40     235 .. 0.95
   2 ?   -2.3   0.0      0.91   3.2e+03      90     126 ..     265     303 ..     258     338 .. 0.64

  Alignments for each domain:
  == domain 1  score: 182.4 bits;  conditional E-value: 2.3e-57
                      EEEE--TTHHHHHHHS-EEEEEEESSEEEEEEEEECT...EEEEEEETTS-EEEESSST-BTTSSSSTCTSBGGSEEEEEEEEEEECTTCEEEE CS
  mRNA_cap_enzyme   1 qPvSlerenlekLkqkkYvvseKaDGiRylmllteee...egvylidRenevyrvenlrfprekdkeklekvldetllDgElvidkveekkkel 91 
                      +PvS++r +l+ L++k+Y+v+eK+DG+Ryl+++te+e   e  y+i+R+ne++ ++  +f + +  ++ +  +++t++DgElvid++++  +++
       KHJ33992.1  40 NPVSFSRRHLKELENKDYYVCEKTDGMRYLLYFTEDEagrEIHYFINRKNEFWFIPRGKFHCPTL-QDRQGWHTKTIVDGELVIDTLPSGETQP 132
                      7***********************************9998888*************988877663.33477******************99*** PP

                      EEEEEEEEEETTEEGTTSBHHHHHHHHHHHTHHHHHHHHHTTCCCCTTSSSEEEE--EEETTHHHHHHHHCCCCCTTSTEEEEEEEESSSB--S CS
  mRNA_cap_enzyme  92 ryliyDivaingvtvaeeplskRleilkkelikprneekktglletdkepfsvrlKefilleavaklleekfikklshesDGLIfqpvkepyva 185
                       yl++D++++ng++++++ l+kRl +++  +++p+++  k    e + + f ++lK + +++ ++  ++++++++l+h +DGLIf++  + y++
       KHJ33992.1 133 VYLVFDCMVLNGQSLMNRTLDKRLGYFNDRIFDPYKKLFKIYHEEVQYQHFVMKLKVMQFSYGMET-MFKHVLPSLPHGNDGLIFTCRTSEYKF 225
                      ***************************************88888888899***************9.999************************ PP

                      EEEEEEEEE- CS
  mRNA_cap_enzyme 186 grdsdllKwK 195
                      g+d+++lKwK
       KHJ33992.1 226 GTDHNILKWK 235
                      *********9 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.91
                      EEEEEEEEEEEETTEEG.TTSBHH.HHHHHHHHHTHHHH CS
  mRNA_cap_enzyme  90 elryliyDivaingvtv.aeepls.kRleilkkelikpr 126
                      + +yl yD++ i +  v  + +++ k + +++ el +  
       KHJ33992.1 265 TEAYLDYDALPIFNLHVyISDKTEdKWYGTMHVELEEWN 303
                      567888998876554431344444144456666665554 PP

>> mRNA_cap_C  mRNA capping enzyme, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.6   1.1   8.7e-37   3.1e-33       1     108 []     239     362 ..     239     362 .. 0.97

  Alignments for each domain:
  == domain 1  score: 114.6 bits;  conditional E-value: 8.7e-37
                 GSEEEEEEEE.................SSS--TTS--EEEEEEEES..TEEEEEEEB---HH...HHHHHHHT-S--TTEEEEEEE-TTS-EEEEEE-T CS
  mRNA_cap_C   1 eNtvDFklel.................ekyedydakpkfellvleg..ekyekfaelylseeekeeweelkslneeldgkIvEcsldeekrWkllriRd 80 
                 eN+vDFk++l                 e y dyda p f+l+v+    ++++++++++++ e   ew+++k+l+e+l+++IvEcs+d+++rW+++r+Rd
  KHJ33992.1 239 ENSVDFKIHLqfpivqpdeidiaegftEAYLDYDALPIFNLHVYISdkTEDKWYGTMHVELE---EWNKFKELQEPLEDRIVECSMDDQQRWRYMRFRD 334
                 7**************************99**********99999886678999*******99...**********************999********* PP

                 T-SS--BHHHHHHHHHHHHTS--HHHHH CS
  mRNA_cap_C  81 DKsepNhisvvekvleSIednvteeeLl 108
                 DK ++Nhis+ve+v+eSI ++vtee+L+
  KHJ33992.1 335 DKINANHISTVESVIESIMNPVTEEDLM 362
                 **************************95 PP

>> DNA_ligase_A_M  ATP dependent DNA ligase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0    0.0003       1.1      11      82 ..      46     122 ..      39     132 .. 0.69
   2 !   22.1   0.1   2.6e-08   9.4e-05     112     204 .]     129     235 ..     126     235 .. 0.80

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0003
                     HHHHHHTTTSEEEEEEEESSEEEEEE....EETTEE.EEEETTS-B-GGGCHHHHHHHHHHBSTTESEEEEEEEEEE CS
  DNA_ligase_A_M  11 ekalkkleekafivEiKyDGeRaqvh....kegdkv.klfSRrlkditaakpelvkalkeafkkdeksvilDGElva 82 
                     +  lk+le+k+ +v +K DG R  +     + g ++ +++ R+ +     +++    + + ++   ++ i+DGElv+
      KHJ33992.1  46 RRHLKELENKDYYVCEKTDGMRYLLYftedEAGREIhYFINRKNEFWFIPRGKFHCPTLQDRQGWHTKTIVDGELVI 122
                     56789999**************55541111345555245566666666666666666666677777899******98 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 2.6e-08
                     HSEEEEEEEEEEEETTEEHTTSCHHHHHHHHHHHB...............--BTTTEEE--EEEESSHHHHHHHHHHHHHTTECEEEEEETT-CC CS
  DNA_ligase_A_M 112 eaelclfvFDiLyldgesltdeplkeRrklLeeil...............kesedrvelaeslevkdveeleelleeaiseglEGlvvKnpdskY 191
                     e++++++vFD+++l+g+sl++++l++R  + ++ +               + +   ++l  ++  + +e++ + +  ++ +g +Gl+     s Y
      KHJ33992.1 129 ETQPVYLVFDCMVLNGQSLMNRTLDKRLGYFNDRIfdpykklfkiyheevQYQHFVMKLKVMQFSYGMETMFKHVLPSLPHGNDGLIFTCRTSEY 223
                     57899**************************9988899999999997653333334445555556777777777777888999999999999999 PP

                     -TTCEEEEEEEEE CS
  DNA_ligase_A_M 192 epgkrsknwlKvK 204
                     + g   +n lK K
      KHJ33992.1 224 KFGTD-HNILKWK 235
                     99988.8888877 PP

>> RNA_ligase  RNA ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.2   6.8e-07    0.0024       2     161 .]      56     235 ..      55     235 .. 0.64

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 6.8e-07
                 EEEEEEE-SSEEEEEEEETT......EEEEETTCEB.....C.TTTHHHHHHTHHHHHHHHHHHHH...ECCEEEEEEEES.SS..TTSS.EEEEEEEE CS
  RNA_ligase   2 evvvtEKlDGtnfriylvke......vgvasRsqil.....p.fgeekfkefkrwaaalrkklkekla.neelilyGElighsikygglpkefyvFdif 87 
                  ++v+EK DG +  +y++++       ++++R+++      + f              ++  l+++ + + + i+ GEl+ ++ + g+ +  ++vFd++
  KHJ33992.1  56 DYYVCEKTDGMRYLLYFTEDeagreiHYFINRKNEFwfiprGkF--------------HCPTLQDRQGwHTKTIVDGELVIDTLPSGETQPVYLVFDCM 140
                 689***************76677888788888888855422122..............222444444466679********99988885557899**** PP

                 EEE.CTT..............BECE--HHHH.HHHHHCCT...B..EEEEE.SS.HHHHHCCC...HHHHTC--EEEEEESSSSBE.TTEBSEEEEE CS
  RNA_ligase  88 dir.dke..............eqrylspdev.ealakglg...tvpvlyegkfl.aaeellel..llskgnkrEGlVikpeselyk.nkgraifKvk 161
                 +++ +                ++ + +++++ +++ ++++    v  l+ ++f+ + e+  ++  + s  +   Gl++ + ++ yk  ++++i+K+k
  KHJ33992.1 141 VLNgQ-SlmnrtldkrlgyfnDRIFDPYKKLfKIYHEEVQyqhFVMKLKVMQFSyGMETMFKHvlP-SLPHGNDGLIFTCRTSEYKfGTDHNILKWK 235
                 99843.346667777777775444444444555555544343444444444444333333333432.456677799999888888888889999987 PP

>> Erp_C  Erp protein C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.48   1.7e+03      17      40 ..     109     136 ..     105     148 .. 0.79
   2 ?   12.5   0.3   3.1e-05      0.11      16      88 ..     335     408 ..     330     416 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.48
       Erp_C  17 vikeqtsvgakevidki....tgpvydd 40 
                 + +++t+v+ + vid +    t pvy  
  KHJ33992.1 109 GWHTKTIVDGELVIDTLpsgeTQPVYLV 136
                 56789**********9755556788755 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 3.1e-05
       Erp_C  16 dvikeqtsvgakevidkitgpvy.ddftdgnkaiyktwgdledeedeglgkllkelsdtrdelrtklnegnkay 88 
                 d i+ + +   ++vi+ i  pv  +d+ +    i++ w+  ++e ++   k+  +   ++ e +tk   gnk+ 
  KHJ33992.1 335 DKINANHISTVESVIESIMNPVTeEDLMNASSKIRENWKLRDEEINNAQKKITGQEVRSKSETKTKSPTGNKKK 408
                 78999999999***********835899999*******877777777777888888889999999999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (462 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       835  (0.0465726); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3249.94
//
Query:       KHJ33993.1  [L=219]
Description: hypothetical protein EV44_g3164 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00029   21.1   0.0    0.00082   19.6   0.0    1.9  1  Retrotrans_gag  Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   4.6e-08   0.00082       4      84 ..      19     118 ..      16     138 .. 0.70

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 4.6e-08
  Retrotrans_gag   4 stslegaAkswlkslvarsida..........sesWkd.lkkaflktflpserkdqleeelsslrQ.gtesvreYvtrfktladqldevlte... 83 
                      + le++A++wl+++ + ++            +  +k+ ++  f+++ ++  +    +++l++l Q ++e +++Y++r   ++++ +  ++e   
      KHJ33993.1  19 DILLEDKAANWLDTSPRWRRVVddkknaterdVIDFKKpICIYFKSNQEQ--TDPNIHSDLRNLAQgPNEPLEKYYQRSLDILSRSH-CRDEplv 110
                     67899******999988776667888999777555554255556665555..889999*******************9888877776.3454555 PP

  Retrotrans_gag  84 .......e 84 
                            +
      KHJ33993.1 111 esgdeclK 118
                     55555551 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1621.84
//
Query:       KHJ33994.1  [L=210]
Description: hypothetical protein EV44_g3869 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.044   13.6   0.0        0.1   12.5   0.0    1.7  1  DUF4939   Domain of unknown function (DUF4939)


Domain annotation for each model (and alignments):
>> DUF4939  Domain of unknown function (DUF4939)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   5.8e-06       0.1      49      84 ..       4      39 ..       1      57 [. 0.82

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 5.8e-06
     DUF4939 49 ymlvdektfssdalkvtflitrltGealewvlpyik 84
                 +l+d + f sd  ++ f+ +rl+G+a + v   +k
  KHJ33994.1  4 VILIDAECFPSDFHRISFITSRLSGKAWDAVQDGVK 39
                579************************988876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1625.27
//
Query:       KHJ33995.1  [L=285]
Description: putative rrna-processing protein utp23 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-31  107.8   0.1      5e-31  107.0   0.1    1.4  1  Fcf1      Fcf1
  ------ inclusion threshold ------
       0.15   12.4   0.1       0.39   11.0   0.0    1.8  2  Yos1      Yos1-like


Domain annotation for each model (and alignments):
>> Fcf1  Fcf1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.0   0.1   5.6e-35     5e-31       1      99 []      51     159 ..      51     159 .. 0.92

  Alignments for each domain:
  == domain 1  score: 107.0 bits;  conditional E-value: 5.6e-35
                 HHCTS-EEEEEEHHHHHHHHHCT....-HHHHHHHTTSEEE----.....SS---HHHHHHHHH-BT...B-TT-EEEE-S-HHHHHHHHTSTT--EEE CS
        Fcf1   1 ktLqakvkpliTqCviaeleklgkk..lkealkiaktferlkCnh.....kkptsaddClvsvvkkk...knkkryivAtqDkdlrrrlrkipgvPily 89 
                 +tL++k kp+iTqC++++l++l ++  + ++++ ak++er++C+h       p+sa++C++svv++k    nk+ry+vA+qD ++r+++r+  gvP++y
  KHJ33995.1  51 RTLHGKAKPMITQCCMRHLYALASEpgIPSIIEQAKSYERRRCGHlpseyPVPLSAKSCITSVVDPKnneINKHRYVVASQDLEVRKAMRDLMGVPLVY 149
                 69*********************87667899***************98766699***********9633356*************************** PP

                 EE--EEEE-- CS
        Fcf1  90 ikrsvmvlEk 99 
                 i+rsvm++E+
  KHJ33995.1 150 INRSVMIMEP 159
                 *********7 PP

>> Yos1  Yos1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   4.3e-05      0.39      46      80 .]     128     162 ..     104     162 .. 0.80
   2 ?   -2.5   0.0      0.71   6.3e+03      14      46 ..     232     260 ..     228     273 .. 0.48

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.3e-05
        Yos1  46 vkakiinliaavrtlmripLiviNilvivyelvlG 80 
                 v ++ +++ +a+r lm +pL+ iN  v+++e ++G
  KHJ33995.1 128 VASQDLEVRKAMRDLMGVPLVYINRSVMIMEPMAG 162
                 55666677799**************9999987665 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.71
        Yos1  14 aiaiLsedR.fLariglssssaesafgeseeasv 46 
                  + i++ dR +L++i   ++ +++     e +s+
  KHJ33995.1 232 PVKIIETDReLLTQIETMTEGEKE-----EATST 260
                 555666666344555443322222.....22233 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       826  (0.0460706); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2089.91
//
Query:       KHJ33996.1  [L=1146]
Description: putative duf726 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   3.1e-125  417.6   2.1   4.3e-125  417.2   2.1    1.2  1  DUF726        Protein of unknown function (DUF726)
  ------ inclusion threshold ------
       0.31   11.1   2.2       0.99    9.5   0.0    2.6  3  Thioesterase  Thioesterase domain
       0.39   10.4   3.0         10    5.8   1.6    2.6  2  EAR           Ethylene-responsive binding factor-associated r


Domain annotation for each model (and alignments):
>> DUF726  Protein of unknown function (DUF726)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  417.2   2.1  7.2e-129  4.3e-125       4     342 ..     548     883 ..     545     884 .. 0.99

  Alignments for each domain:
  == domain 1  score: 417.2 bits;  conditional E-value: 7.2e-129
      DUF726   4 krylliglAglaGgaligltggLaaPlvaagigallaglGltgsaafLasvggsavitallgaagAklsvkkmkkrvkeikdFefiplseqirlksltv 102
                 kry+++glA+++G+++igl++gL+aP+++ag++a ++++G+tg+ +fLa++gg+a+it+  +a+g  ++v+  ++r++++k+Fe++pl++++r+ +l+v
  KHJ33996.1 548 KRYVMMGLATVGGSLVIGLSAGLLAPVIGAGLAAGFTTIGVTGTGGFLAGAGGAAIITSGAAASGGLIAVRAADRRTGAVKTFEYRPLHNNRRV-NLIV 645
                 89******************************************************************************************98.**** PP

      DUF726 103 tvsislelsdeddvtapwralakaekdlYalkwEvelLkelGkaletilasealsvakqeilkrtvlaslvaaltWPlaLlkvakildnpwnvsleraa 201
                 tvs+++ +++ ddv+ p+++++++++d+Y++ wE+e+L ++G+++ +ila+eal++ +q++l++t+l sl+aal+ P+ L+k+a+++dnpw+vsl+ra+
  KHJ33996.1 646 TVSGWM-TGKVDDVRLPYSTVNPIMGDIYSVLWEPEMLRSMGDTI-NILATEALTQGLQQVLGSTILISLMAALQLPVVLTKLAYLIDNPWTVSLDRAN 742
                 ******.**************************************.***************************************************** PP

      DUF726 202 kaGklLAdallsraqGeRpvtLiGfslGARviyvCLlelakkkalglvenvillGaPvtteakvwlkvrsvvsgRlvnvysenDylLgflyRtssaqf. 299
                 +aG +LAd l++r+ G+Rp+t +G+slG Rvi++CL+el++k a+glv+nv+l+G Pv++++ ++lk+rs+v+gR+vn+y+ nD++Lg+l+R +s ++ 
  KHJ33996.1 743 SAGLILADSLIERNLGTRPITFVGYSLGSRVIFSCLKELSRKGAYGLVQNVFLFGSPVVAKKDEYLKARSIVAGRFVNGYATNDWILGYLFRLTSGGIg 841
                 **************************************************************************************************9 PP

      DUF726 300 rvaglqrieldvekvenvdvselvegHldYrkklkkilkaigl 342
                 +vagl ++ + v+ ven+dv+elv gH++Yr+ ++++l+++g+
  KHJ33996.1 842 AVAGLAPVGC-VPDVENIDVTELVPGHMSYRTAMPRLLRHVGW 883
                 9********9.******************************98 PP

>> Thioesterase  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       1.3   7.7e+03     162     200 ..     305     351 ..     253     368 .. 0.43
   2 ?    9.5   0.0   0.00016      0.99      61     111 ..     755     807 ..     748     819 .. 0.79
   3 ?   -0.1   0.2      0.13   8.1e+02      96     186 ..     880     962 ..     876     983 .. 0.71

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.3
                   S..............-TTSCSEHHCEEEEEEGSS-CTCCCCCCCHCHCHCTCE CS
  Thioesterase 162 s..............lrpeaaqklratlfngsddklkdldtlelaerweqkts 200
                   +              +r++++      +  g+ +k++++ ++   + w+qk+ 
    KHJ33996.1 305 RiayvgmvrlilstmIRQSEKL-----ISIGDAKKETSMAAE-AMKMWSQKMM 351
                   2333333333321113333333.....333333344444422.2333766664 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00016
                   HH-SSSSEEEEEETHHHHHHHHHHHHHHHCT-..SEEEEEEESCCCCCCHHCH CS
  Thioesterase  61 qiqpegPyalfGhSlGgllAfevArqLesqGl..avkslflidssapseteaq 111
                   +     P +++G+SlG+ + f   ++L ++G    v+ +fl++s+    + ++
    KHJ33996.1 755 RNLGTRPITFVGYSLGSRVIFSCLKELSRKGAygLVQNVFLFGSPVVAKKDEY 807
                   4555669***********************762259*******8876555555 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.13
                   EEEEESCCCCCCHHCHHCCCHTTHHTHHHHHCCTTHHHCCTTTHCCHHHHHHHHHHHHHHHHHTCCS-TTSCSEHHCEEEEEEGSS-CTCC CS
  Thioesterase  96 slflidssapseteaqeasrraedeefveeltdlggtepeelledeellsellpalradyraleqyslrpeaaqklratlfngsddklkdl 186
                   ++++i  s  +++ ++ ++++ +++  +e++++++++  ++l++ e   +e +++++ ++ + +++ + + + +   +++++++d+ + + 
    KHJ33996.1 880 HVGWIVESDEFVEIEDPDPDNHQER-QRELINEIEEA-RKQLEKKE---KEKVSRVKFAFFNRKKKAKKKADWE---TYVEYKKDSQQSKS 962
                   5666666666666666666666666.78888888887.88888888...8888888888888887766666666...77777777776655 PP

>> EAR  Ethylene-responsive binding factor-associated repression
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.013        77       3      15 ..      26      38 ..      24      38 .. 0.90
   2 ?    5.8   1.6    0.0017        10      17      34 ..      58      75 ..      58      76 .. 0.91

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.013
         EAR  3 eeevELsLGLSLG 15
                ++++EL LG SL+
  KHJ33996.1 26 KDNIELPLGVSLN 38
                799*********8 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0017
         EAR 17 rFGvdkkskkLarSSSia 34
                ++G ++++  L+rSSS+ 
  KHJ33996.1 58 TYGISRRRSQLSRSSSKS 75
                59**************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1785  (0.0995594); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.87u 0.28s 00:00:01.14 Elapsed: 00:00:00.43
# Mc/sec: 7959.68
//
Query:       KHJ33997.1  [L=126]
Description: hypothetical protein EV44_g0152 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        1.5    9.1  18.3        6.1    7.1  17.6    2.0  1  DUF3432   Domain of unknown function (DUF3432)


Domain annotation for each model (and alignments):
>> DUF3432  Domain of unknown function (DUF3432)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  17.6   0.00034       6.1      16      59 ..      63     109 ..      41     115 .. 0.65

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.00034
     DUF3432  16 sssvatsyPspitt.syPsPvst.syssP.vsssyssPvhtsfPsPs 59 
                 s+++++ yPs+  t  y sP  t  y+s  ++  y+sP  ts+P+P+
  KHJ33997.1  63 SPTATSGYPSATGTgGYSSPSGTgGYPSAtGTGGYASPTGTSYPTPT 109
                 23344558887754257777766357765246678888888888774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       260  (0.0145016); expected 358.6 (0.02)
Passed bias filter:                      148  (0.00825478); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 987.25
//
Query:       KHJ33998.1  [L=290]
Description: putative metallopeptidase family m24 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-40  139.3   0.3    2.4e-40  138.5   0.1    1.5  1  Cyclin    Cyclin
     0.0073   16.1   0.1      0.012   15.4   0.1    1.4  1  Cyclin_N  Cyclin, N-terminal domain


Domain annotation for each model (and alignments):
>> Cyclin  Cyclin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.5   0.1   2.7e-44   2.4e-40      32     161 .]     114     241 ..      93     241 .. 0.97

  Alignments for each domain:
  == domain 1  score: 138.5 bits;  conditional E-value: 2.7e-44
                 --T.....................T--SS--SS-HHHHHHHHHHHTT--HHHHHHHHHHHHHHHH..H-TT---STTTHHHHHHHHHHHHHHHH-SS-- CS
      Cyclin  32 lensqkqssshtkttfaqtpkessFatkavpaisigsylsrlqkfgesaplvllgtliYldrivkrcvsealvvtsanihRllivallvatKflvDlsy 130
                 +e+++  +++ +  + ++++++++F++k  p+i++++yl+r++kf++++++++l+t+ Y+++++    +++++vt +n hRl++++l+v +K+++D  y
  KHJ33998.1 114 TEPYIVIGENTETSNAQRSAIIRKFYSKSLPHINLVDYLMRIHKFCPMSTAIYLATSSYIHKLAS--EEKTISVTRRNCHRLVLAGLRVTMKAFEDQAY 210
                 688999999********************************************************..9******************************* PP

                 -HHHHHHHHTS-HHHHHHHHHHHHHHTTT-- CS
      Cyclin 131 snekfakvggislkELnkLEidFlflvdFdl 161
                 s+++f+kvgg+   EL++LEi+F+flv+Fdl
  KHJ33998.1 211 SHSRFSKVGGVTPGELARLEINFCFLVNFDL 241
                 *****************************97 PP

>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1   1.3e-06     0.012      33     126 ..     147     241 ..     123     242 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.3e-06
                 HHHHHHHHHHHHTT--TTHHHHHHHHHHHHHHHS...---CCCHHHHHHHHHHHHHHHHSSS---HHHHHHHTTTSS-HHHHHHHHHHHHHHTTT-- CS
    Cyclin_N  33 ilidwlvevaekfkltpetlflavnyldRflskk...svpkdklqlvgatcLllAaKveeisppkledlvyitdeafteeeilemErliLetLnfdl 126
                 +l+d+l+++++   +++ + + + +y++++ s++   sv++++ ++++++ L +  K  e+++ + + +  +  + +t  e+ ++E  +    nfdl
  KHJ33998.1 147 NLVDYLMRIHKFCPMSTAIYLATSSYIHKLASEEktiSVTRRNCHRLVLAGLRVTMKAFEDQAYSHSRFSKV--GGVTPGELARLEINFCFLVNFDL 241
                 79******************************5546789999***************999988877777766..45667777777777766666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.21s 00:00:00.63 Elapsed: 00:00:00.35
# Mc/sec: 2459.66
//
Query:       KHJ33999.1  [L=349]
Description: putative dna repair protein rhp51 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   5.1e-129  429.0   0.0   6.4e-129  428.6   0.0    1.1  1  Rad51         Rad51
    1.5e-09   37.7   0.0    2.3e-09   37.1   0.0    1.2  1  AAA_25        AAA domain
    1.8e-08   34.2   0.0    2.5e-08   33.7   0.0    1.1  1  RecA          recA bacterial DNA recombination protein
    8.9e-06   26.2   1.0    2.6e-05   24.7   0.4    2.1  2  HHH_5         Helix-hairpin-helix domain
    1.8e-05   24.2   0.2    5.7e-05   22.6   0.2    1.9  1  ATPase        KaiC
  ------ inclusion threshold ------
      0.031   13.6   0.1       0.19   11.0   0.0    2.0  2  DnaB_C        DnaB-like helicase C terminal domain
      0.044   13.5   0.0      0.081   12.6   0.0    1.5  1  AAA_24        AAA domain
      0.046   12.9   0.2       0.48    9.5   0.0    2.0  2  PAXNEB        PAXNEB protein
       0.11   12.5   0.1       0.63   10.1   0.1    2.1  2  ssDNA_TraI_N  single-stranded DNA binding TraI N-terminal sub
       0.14   12.4   0.2       0.51   10.6   0.1    1.9  2  AAA_22        AAA domain


Domain annotation for each model (and alignments):
>> Rad51  Rad51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  428.6   0.0  3.6e-132  6.4e-129       1     254 [.      86     340 ..      86     341 .. 0.99

  Alignments for each domain:
  == domain 1  score: 428.6 bits;  conditional E-value: 3.6e-132
                 -S-EBHHHHHHHHHSS-EE--S-HHHHHHHTSSEESSSEEEEEESTTSSHHHHHHHHHHHTTS-TTTS--SSEEEEEESSS---GGGGHHHHHHTT--H CS
       Rad51   1 lgfvsavellekrsellqlttGskklDelLgGGietgsiteifGefrsGktqlchtlcvtvqlplelgGgegkavyidtegtfrperlveiaerykldk 99 
                 +gf++a+e++++rsel+++ttGsk+lD+lL GGietgs+teifGefr+Gk+q+chtl+vt+qlp ++gGgegk++yidtegtfrp rl+++a+ry+l +
  KHJ33999.1  86 MGFTTATEMHQRRSELISITTGSKQLDTLLAGGIETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDTEGTFRPVRLLAVANRYGLSG 184
                 79************************************************************************************************* PP

                 HHHGGGEEEEE--STTHHHHHHHHTHHHHHHS-EEEEEEETTTGGGCH-------THHHHHHHHHHHHHHHHHHHHH--EEEEEEE-------..---- CS
       Rad51 100 eevlenvayaRaytiehqeellqqaaallaedkfallivDsvtalyRtdfsgrgelakRqqklgkllrtLrkladefevavvitnqvvaqvdgq.aalf 197
                 eevl+nvayaRay+++hq +ll+qaaa+++e++f+ll+vDs+t+lyRtdf grgel++Rq++l+k+lrtL++ladef++avvitnqvvaqvdg  +a+f
  KHJ33999.1 185 EEVLDNVAYARAYNSDHQLQLLNQAAAMMCETRFSLLVVDSATSLYRTDFVGRGELSSRQTHLAKFLRTLQRLADEFGIAVVITNQVVAQVDGGpSAMF 283
                 *******************************************************************************************985389** PP

                 --------HHHHHHHH-SEEEEEEE-STTEEEEEEES-SSS-S-EEEEEEETTEEE- CS
       Rad51 198 sadpkkPigGlvlahasttRlalrkgkgeeRivkvvdsPnlpeleavfaigeeGied 254
                 ++dpkkPigG+++ahasttRl+l+kg+ge+Ri+k++dsP+lpe+++ fai+e+Gi d
  KHJ33999.1 284 NPDPKKPIGGNIIAHASTTRLSLKKGRGETRICKIYDSPCLPESDCLFAINEDGIGD 340
                 *******************************************************98 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0   1.3e-12   2.3e-09      13     188 ..     102     270 ..      90     272 .. 0.82

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 1.3e-12
      AAA_25  13 adlaapppprrwlvkgllpagelallaGapgtGKttlaldlalavatGkpwlgpvapeqgkVlyvsaEdsedelrrRlravgealrddarllvldlagv 111
                   + +  ++++ l+ g +  g+++ ++G   tGK+ ++  la+++ +  p+  ++    gk+ly+++E++    + Rl av   + + +++ + ++a  
  KHJ33999.1 102 ISITTGSKQLDTLLAGGIETGSVTEIFGEFRTGKSQICHTLAVTCQL--PF--DMGGGEGKCLYIDTEGTF--RPVRLLAVANRYGLSGEEVLDNVAYA 194
                 556667788899999999***********************999986..77..47779************8..799*********99999988888775 PP

      AAA_25 112 eslpLfakdrggtlltadvdaleaaieevegvrlvviDplsralgg.....densnsdv..galvealeriarrtgaavllvhH 188
                    + + +d++ +ll+++    +a + e  +  l+v+D+ +++++      +e s++++  ++++  l+r+a+++g+av+++ +
  KHJ33999.1 195 ---RAYNSDHQLQLLNQA----AAMMCE-TRFSLLVVDSATSLYRTdfvgrGELSSRQThlAKFLRTLQRLADEFGIAVVITNQ 270
                 ...666666666666666....444445.359********999988566667888888667*******************9865 PP

>> RecA  recA bacterial DNA recombination protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.0   1.4e-11   2.5e-08      26     221 ..      96     308 ..      75     317 .. 0.75

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 1.4e-11
                 -.-----EE--S-HHHHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHHHH......HTT--EEEEESS----HH....HHHHTT--GGG-E....E CS
        RecA  26 keklkvetissGslaldialGiGGlpkGriieiyGpessGkttlalhaiaeaq......kkggvaafidaehaldpk....yakklGvdidell....v 110
                 +++ ++ +i++Gs +ld+ l  GG+  G ++ei+G   +Gk+ ++  + + +q         g + +id+e ++ p+     a++ G+  +e+l     
  KHJ33999.1  96 QRRSELISITTGSKQLDTLLA-GGIETGSVTEIFGEFRTGKSQICHTLAVTCQlpfdmgGGEGKCLYIDTEGTFRPVrllaVANRYGLSGEEVLdnvaY 193
                 345778899********9887.*******************99865555555522321123579**********9963333689999987666533224 PP

                 E...--SSHHHHHHHHHHHHTTT--SEEEEE-TTT---STT-.----------HHHHHHHHHHHHHHHHHTTT--EEEEEEE-----..-..----.-- CS
        RecA 111 s...qpdtGeqaleiadalvrsgaidlivvdsvaalvpkaei.eGemgdskvglqarlmsqalrkltgaisksntvvifinqireki..G..vmfg.np 200
                 +   + d+  q l+ a a++  +   l+vvds ++l   + +  Ge++  +       +++ lr l+   ++  ++v+  nq+  ++  G   mf  +p
  KHJ33999.1 194 ArayNSDHQLQLLNQAAAMMCETRFSLLVVDSATSLYRTDFVgRGELSSRQ-----THLAKFLRTLQRLADEFGIAVVITNQVVAQVdgGpsAMFNpDP 287
                 422235666677777788999999*********999876655235555443.....34578999999999*************9999541446776589 PP

                 -----HHHHHHH-SEEEEEEE CS
        RecA 201 etttGGralkfyasvrldvrr 221
                 +   GG+ +   ++ rl +++
  KHJ33999.1 288 KKPIGGNIIAHASTTRLSLKK 308
                 9999****9999999999887 PP

>> HHH_5  Helix-hairpin-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.4   1.5e-08   2.6e-05       4      56 ..      29      81 ..      27      82 .. 0.95
   2 ?   -2.5   0.0       4.5     8e+03      29      47 ..     296     314 ..     295     320 .. 0.78

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 1.5e-08
                HHTSTT--HHHHHHHHTTT--SHHHHHHS-HHHHHTSTTS-HHHHHHHHHHHH CS
       HHH_5  4 LlsvsGiGpktAlallsaGiesvedlaaadveeLakipGiGkktAeriilelk 56
                L +v G+ ++++  ++++G+++ve +a   +  L +i+Gi++ +A +i+ e+ 
  KHJ33999.1 29 LEGVAGLTKRDIQLIIDGGFNTVESVAYTPRRILEQIKGISEQKATKILTEAS 81
                889**********************************************9986 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 4.5
                 HHHS-HHHHHTSTTS-HHH CS
       HHH_5  29 laaadveeLakipGiGkkt 47 
                 +a+a++ +L+  +G G+ +
  KHJ33999.1 296 IAHASTTRLSLKKGRGETR 314
                 8999999999888888766 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.2   3.2e-08   5.7e-05       2     164 ..     105     271 ..     104     317 .. 0.68

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 3.2e-08
      ATPase   2 ktgIeglDeilkgGipegrvvlitGepGtGKtifalqFlikgaekyge.....pgvfvtveepa..edlrenakslGwdlekleeegklaiidasesae 93 
                  tg + lD++l gGi  g+v+ i Ge  tGK+ ++ + +++    ++      +++++ +e +   + l   a++ G   e++ ++  +a+  a++s++
  KHJ33999.1 105 TTGSKQLDTLLAGGIETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMgggegKCLYIDTEGTFrpVRLLAVANRYGLSGEEVLDN--VAYARAYNSDH 201
                 7999*********************************9999766553211223899999998754478888888999999998888..66666666654 PP

      ATPase  94 esaeekdkedleelieelaeaikeikakrvviDsitgl.a........yeekeavaReilrqlvrvlkklgvTailvsek 164
                 +           +l+++ a ++ e++ + +v+Ds t+l           ++++  + + lr+l r   + g+  ++++++
  KHJ33999.1 202 Q----------LQLLNQAAAMMCETRFSLLVVDSATSLyRtdfvgrgeLSSRQTHLAKFLRTLQRLADEFGIAVVITNQV 271
                 4..........455666666666666666666666666110111000023334444455555555556666666666665 PP

>> DnaB_C  DnaB-like helicase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.24   4.3e+02       2      41 ..     104     144 ..     103     152 .. 0.85
   2 ?   11.0   0.0   0.00011      0.19     117     182 ..     205     275 ..     186     281 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.24
                 BXSSTHHHHHHC.TSBXTTXEEEEEEXTTSSHHHHHHHHHH CS
                 xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C   2 lstgfkdLDklt.sGlqkgdliiiAarpsmGktalalniae 41 
                 ++tg k+LD+l+ +G++ g ++ i +   +Gk+ ++ ++a 
  KHJ33999.1 104 ITTGSKQLDTLLaGGIETGSVTEIFGEFRTGKSQICHTLAV 144
                 78999****876268999**************999988885 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00011
                 HHHHHHHHHHHTTEEEEEEEEGGGTB.....TSCS..SSCCCHHHHHHHHHHHHHHHHCTSXEEEEEEXSGGG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      DnaB_C 117 irskarrlkkekglgliviDyLqlme.....gsee..kenreqevseisrsLkalakelnvpvialsqLsrav 182
                 + ++a  +  e++ +l+v+D    +      g  +   ++r++ +++  r+L+ la e+ + v++  q+  +v
  KHJ33999.1 205 LLNQAAAMMCETRFSLLVVDSATSLYrtdfvG--RgeLSSRQTHLAKFLRTLQRLADEFGIAVVITNQVVAQV 275
                 55566667777889999999877665233322..233569**************************9987776 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   4.5e-05     0.081       7      79 ..     127     231 ..     122     275 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.5e-05
      AAA_24   7 iyGpsgiGKTtlakel.............gpkplfidtekGlksldadkfpdie.....swedfldevvel.................aaeladyktlv 70 
                 i+G+  +GK+ ++ +l             + k l+idte+ ++ +    +         s e++ld v++                     + +++ lv
  KHJ33999.1 127 IFGEFRTGKSQICHTLavtcqlpfdmgggEGKCLYIDTEGTFRPVRLLAV---AnryglSGEEVLDNVAYAraynsdhqlqllnqaaaMMCETRFSLLV 222
                 89**************************99**********7766666665...3445999999999999999999999*****99988666778***** PP

      AAA_24  71 iDtidelee 79 
                 +D+++ l++
  KHJ33999.1 223 VDSATSLYR 231
                 ******998 PP

>> PAXNEB  PAXNEB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00027      0.48      19      40 ..     104     125 ..      93     143 .. 0.89
   2 ?    1.3   0.0     0.084   1.5e+02     227     255 ..     240     268 ..     185     272 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00027
      PAXNEB  19 tStGtpsLDklLgGGLplGsil 40 
                 + tG+++LD+lL+GG+  Gs+ 
  KHJ33999.1 104 ITTGSKQLDTLLAGGIETGSVT 125
                 67*****************986 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.084
      PAXNEB 227 eeskpedllkFLhsLrallrssnlvalit 255
                  +s++++l kFL++L+ l+ +  + ++it
  KHJ33999.1 240 LSSRQTHLAKFLRTLQRLADEFGIAVVIT 268
                 578999***********999888888887 PP

>> ssDNA_TraI_N  single-stranded DNA binding TraI N-terminal subdomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.99   1.8e+03      26      34 ..      64      72 ..      51      80 .. 0.78
   2 ?   10.1   0.1   0.00035      0.63       7      29 ..     255     277 ..     252     280 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.99
  ssDNA_TraI_N 26 QvsGpreQa 34
                  Q+ G+ eQ+
    KHJ33999.1 64 QIKGISEQK 72
                  999999996 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00035
  ssDNA_TraI_N   7 drLAkefaasvkageeSVAQvsG 29 
                   +rLA ef  +v   ++ VAQv G
    KHJ33999.1 255 QRLADEFGIAVVITNQVVAQVDG 277
                   69*******************98 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       5.8     1e+04      52      70 ..      57      75 ..      49     103 .. 0.62
   2 ?   10.6   0.1   0.00029      0.51       4     127 ..     121     267 ..     119     270 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 5.8
      AAA_22 52 sskdllrellralglelka 70
                +++ +l+++  + ++++ +
  KHJ33999.1 57 TPRRILEQIKGISEQKATK 75
                5566666666555554444 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00029
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka............erlsseellealeqalrara 90 
                 t +++ ++Ge  tGK+  + +l+ + +   +    + ++++++  +   +  l  ++++ +gl++++            + ++++ l +a +  +++r+
  KHJ33999.1 121 TGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDTEGTFRPVRL-LAVANRYGLSGEEvldnvayaraynSDHQLQLLNQAAAMMCETRF 218
                 6778889****************997544444447777777777777755555.578888998888899999999887444444444466666666666 PP

      AAA_22  91 vielliiDEaqhlr......s..........eealeeLrsllnlsrkgvqliL 127
                    ll++D a  l       +          ++ l++L +l++  ++g+++++
  KHJ33999.1 219 S--LLVVDSATSLYrtdfvgRgelssrqthlAKFLRTLQRLAD--EFGIAVVI 267
                 6..*********9877666615566788889999999999999..99999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 2900.84
//
Query:       KHJ34000.1  [L=322]
Description: hypothetical protein EV44_g3393 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2438.79
//
Query:       KHJ34001.1  [L=1053]
Description: putative rheb small monomeric gtpase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-44  151.2   8.3    3.2e-44  151.2   8.3    1.9  3  WAPL           Wings apart-like protein regulation of heteroc
  ------ inclusion threshold ------
      0.058   13.3   0.2       0.16   11.9   0.2    1.7  1  UNC45-central  Myosin-binding striated muscle assembly centra
       0.11   12.8   0.2       0.11   12.8   0.2    2.7  2  DUF2072        Zn-ribbon containing protein


Domain annotation for each model (and alignments):
>> WAPL  Wings apart-like protein regulation of heterochromatin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.2      0.38   2.3e+03      74     105 ..     229     258 ..     171     309 .. 0.60
   2 ?   -3.4   0.2      0.53   3.2e+03     236     305 ..     416     521 ..     397     540 .. 0.54
   3 !  151.2   8.3   5.4e-48   3.2e-44       2     365 ..     581     918 ..     580     920 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.38
        WAPL  74 pdddspsLalaaaalfyvlssdshdadldrss 105
                 p+    sL+l ++ +  + + d+ d+ + +++
  KHJ34001.1 229 PELS--SLSLITSKMTRLKENDTFDMPVNDDQ 258
                 2223..45555555555555555555444444 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.53
        WAPL 236 LEnvtflseenqayllrlkkkqlvikliklLqdissqir......................................lenhlaglssarckleeellll 296
                 LE+ tf ++ +q +     +    ++  + L+ i+s ++                                       +n + +l s+   +e + +++
  KHJ34001.1 416 LESSTFRHDNSQLEPK-NEATP-PSENMHRLRMIDSLVQkaenlnpsdnvlsdelesdkeshtlsikssvspsrsrsQSNNFEPLGSQVMPQESQSSIS 512
                 6666666666665554.33333.3333334444444444444444444455555555555555555555555555554455555555555555555555 PP

        WAPL 297 alrlllnlT 305
                  l++  + T
  KHJ34001.1 513 SLGVGPKFT 521
                 555555555 PP

  == domain 3  score: 151.2 bits;  conditional E-value: 5.4e-48
        WAPL   2 vrtlhElreaGenqefvdeveyildgle.egqplsvRclSlisLaskcaspqfrrqlrahgiakrlfkalvdapdddspsLalaaaalfyvlssdshda 99 
                 +++++Elr++G+ ++fvde  +++d+++ +g+  s+R+++l++Lask+ +  f +q+ra++++++lf  l+ ++d +s++L++ ++  +++ ++  h +
  KHJ34001.1 581 IKSVYELRKSGAIKRFVDECTDLFDRIGyPGKVNSIRRSGLLDLASKMRDTNFAQQFRANSMEQQLFLKLNEEKDAISGFLIMSILIALVMEGPVVHLI 679
                 79**************************777777***************************************************************** PP

        WAPL 100 dldrssgllrlllkLLesdtdivtlakdrktnlsksdqksivalveeklratktwsavtpnqlspksLaLetLlsltskkaggqfkeeLrelGgl.dvv 197
                  +++ +g+ +l+ +LL+ +  i ++ kdrktn+sk +q  +v+  + +l  ++  + +  + +sp+++aL +L  l  +      +     + +   ++
  KHJ34001.1 680 PFLCLNGFKKLIFNLLDFKLGIPKICKDRKTNMSKLAQSLLVEY-HNQLLRSPSLDGKDLDMISPRTIALICLKKLFYQ-----SR----DVENSsSLI 768
                 ********************************************.8888888889999999******************.....87....999999*** PP

        WAPL 198 vnvvatclvnllsssseeakkdtrsdetlsllerclsvLEnvtflseenqayllrlkkkqlvikliklLqdissqirlenhlaglssarckleeellll 296
                 +++++++l+++++   +e+ +++ +de +++l ++  +L  + + ++    +  ++ +++ ++ l+++L+             +l    ++++ + ++ 
  KHJ34001.1 769 SEELVEKLFTIMKLILSESLQKSSNDEISIDLPLVAECLQLYYTAASN-FLDKNKWLNNY-LPLLADVLE------------LTL----HHDLCDAHTE 849
                 ***********9887777788888888999*********999955555.555556*****.********6............333....3344455666 PP

        WAPL 297 alrlllnlTndnpsaceafgskkvGaveglisvalslfsnlspryspe.eks.lDllvlvLglliNLveks 365
                 +l+l+l++Tn+n+ a e+f ++++  +  l +  +s+f+ l+ + s+   ++ lD l l+Lg+liN++e+s
  KHJ34001.1 850 ILKLTLQVTNQNSLAVEKFVQPSL--ILTLSKRFVSQFNFLNGSHSESqFSRiLDHLSLLLGVLINFSESS 918
                 7***********************..***************655555564446****************87 PP

>> UNC45-central  Myosin-binding striated muscle assembly central
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2   2.6e-05      0.16      19      93 ..     744     832 ..     737     852 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.6e-05
                    HHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHH............SCCTHHHHHHHHHHHHHHHHSSHHHHHHHHTSTTHHHHHHHHHH CS
  UNC45-central  19 rslallilskll..daakeefeeaiseflesll............ekgdeddllnalsvltalFpvvpdvasalflsegflesllelve 93 
                    r++al++l kl+    + e+ +  ise l ++l            +k+++d++ + l ++++++++ +++as+ + +++ l++ l+l++
     KHJ34001.1 744 RTIALICLKKLFyqSRDVENSSSLISEELVEKLftimklilseslQKSSNDEISIDLPLVAECLQLYYTAASNFLDKNKWLNNYLPLLA 832
                    899*********763345566666666666666666677779999*********************************99999999875 PP

>> DUF2072  Zn-ribbon containing protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   1.8e-05      0.11      13      74 ..      84     145 ..      79     196 .. 0.70
   2 ?   -2.4   0.6      0.91   5.4e+03      56      76 ..     332     352 ..     284     365 .. 0.48

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.8e-05
     DUF2072  13 dgskeilkGCpsCGgkkFlyvkeeekkedvseekeelvaeaeeeieevldaeeteeeklekk 74 
                 d +++i++  p CG + F++v+++e  + +++++++ +a ++ + ++v +++ +++ k++ k
  KHJ34001.1  84 DDETQIKEATPRCGQESFQHVEPNELLQGNNNQRRSNIAINNVRSNSVPHEDAKSRLKAKSK 145
                 78899*******************99888877777444444434344433333333333322 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.91
     DUF2072  56 eieevldaeeteeeklekkek 76 
                 +++  l+a++ ++++++k+ k
  KHJ34001.1 332 TASMSLEAQKVKKSRKQKQPK 352
                 222333333333333333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1053 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1074  (0.059903); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.77u 0.28s 00:00:01.05 Elapsed: 00:00:00.46
# Mc/sec: 6900.16
//
Query:       KHJ34002.1  [L=359]
Description: putative glycoside hydrolase deacetylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.7e-27   94.1   0.0    8.3e-27   93.5   0.0    1.2  1  Polysacc_deac_1  Polysaccharide deacetylase
     0.0011   19.4  14.3     0.0011   19.4  14.3    1.7  2  Chitin_bind_1    Chitin recognition protein
  ------ inclusion threshold ------
      0.014   15.1   0.0      0.023   14.4   0.0    1.4  1  DUF2334          Uncharacterized protein conserved in bacteri
      0.024   13.8   0.1      0.038   13.1   0.1    1.2  1  VP7              Glycoprotein VP7


Domain annotation for each model (and alignments):
>> Polysacc_deac_1  Polysaccharide deacetylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.5   0.0   1.9e-30   8.3e-27       5     123 ..     139     266 ..     136     267 .. 0.93

  Alignments for each domain:
  == domain 1  score: 93.5 bits;  conditional E-value: 1.9e-30
                      TSTEEEEEEEESSCSCHHHHHHHHHHCT--EEEEE-HHHHCH-........HHHHHHHHHTTEEEEE--SS--EGGGSHHHHHHHHHHHHHHHH CS
  Polysacc_deac_1   5 gkksvalTfDdgprdntteilpvLkkykvkatffvigglvedy........pdevremaasGveignHtinhsnlkrlseeevrreierakdal 90 
                      ++ +va TfDdgp  +t+ +l+ +k+y++katff++g++ +++         d +++m+a+G+++++Ht++h+ l ++ ++++ ++i  ++ a+
       KHJ34002.1 139 TPGTVAFTFDDGPYLYTNDVLDKFKRYNAKATFFITGNNFGKGqidttpawSDVIKRMVAEGHQVASHTWTHQSLDKVDSRTFHNQIIYNEMAI 232
                      5789***********************************7777777778889****************************************** PP

                      HHHHS----EEE-GGGE.E-HHHHHHHHHTT.EE CS
  Polysacc_deac_1  91 rkalgreprlfryPygs.asatvlevarelgfay 123
                      r++lg  p ++r+Py++   ++  + +r+lg+++
       KHJ34002.1 233 RNILGFFPSYIRPPYSQcEEDNCGNKLRNLGYHV 266
                      ****************9667788999***99975 PP

>> Chitin_bind_1  Chitin recognition protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4  14.3   2.4e-07    0.0011      10      36 ..      74      99 ..      61     100 .. 0.72
   2 ?   -3.6   0.5       3.9   1.7e+04      11      16 ..     250     255 ..     248     258 .. 0.53

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 2.4e-07
                   --STT-EE-TTSBEEBSHHHH.STT--B CS
  Chitin_bind_1 10 tCplnvCCSqyGyCGttsdyC.gagCqs 36
                   +C   +CCS  GyCGt+++yC +  Cq 
     KHJ34002.1 74 SC--TNCCSAEGYCGTGPEYCiSPDCQY 99
                   33..58***************5455*96 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 3.9
                    -STT-E CS
  Chitin_bind_1  11 CplnvC 16 
                    C++ +C
     KHJ34002.1 250 CEEDNC 255
                    555555 PP

>> DUF2334  Uncharacterized protein conserved in bacteria (DUF2334)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   5.1e-06     0.023      38      82 ..     175     214 ..     155     261 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 5.1e-06
     DUF2334  38 PrykdpktgskvnlsenpefvevLkylqakGgeialHGYtHqygt 82 
                  ++  +      ++   p++ +v+k++ a+G+++a H +tHq+  
  KHJ34002.1 175 GNNFGK-----GQIDTTPAWSDVIKRMVAEGHQVASHTWTHQSLD 214
                 444444.....67788999***********************973 PP

>> VP7  Glycoprotein VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   8.4e-06     0.038     253     308 ..     274     329 ..     267     340 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 8.4e-06
         VP7 253 earenvalirvsts.dildisldpltagqterslkinakkwwtvfytvvdyvdtivq 308
                 e  +n+ + ++  s di d +++p  ++ t   l i+    ++v y + dy+   + 
  KHJ34002.1 274 EGYLNTDVTQIQKSkDIWDATINPG-NPSTSNFLEIEHDIHYQVAYNLTDYILDSIY 329
                 66789******9874799******6.699**********************976654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2789.24
//
Query:       KHJ34003.1  [L=146]
Description: putative zinc beta-ribbon [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-28   99.0   1.1    1.8e-28   98.4   1.1    1.3  1  Elf1           Transcription elongation factor Elf1 like
  ------ inclusion threshold ------
       0.01   15.4   0.0      0.011   15.2   0.0    1.1  1  EST1_DNA_bind  Est1 DNA/RNA binding domain


Domain annotation for each model (and alignments):
>> Elf1  Transcription elongation factor Elf1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.4   1.1     2e-32   1.8e-28       1      77 [.       2      79 ..       2      80 .. 0.91

  Alignments for each domain:
  == domain 1  score: 98.4 bits;  conditional E-value: 2e-32
        Elf1  1 gkRkk.kakkrkkkkkkklptkFdCpfCnheksvevkldkkekiaevsCkvCgesfetkvnalsepvDvYskwiDace 77
                gkRk  ++k+   +k+ +lpt+F C+fCnheksv vkldkk+++++++Ck+C+++f++ vn+ls++vDvYs+w+Dac+
  KHJ34003.1  2 GKRKAaAKKPVGPRKNAPLPTVFPCLFCNHEKSVMVKLDKKSGVGHLNCKICNQQFQCAVNYLSAAVDVYSDWVDACD 79
                89**96333445666677***********************************************************7 PP

>> EST1_DNA_bind  Est1 DNA/RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   1.2e-06     0.011     195     240 ..      46     100 ..      26     136 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.2e-06
                    ............-SS-THHHHHHHHHHHHHTT-HHHH..HHHHT-HHHHHHHHHH CS
  EST1_DNA_bind 195 k.......rdketpsatrvLpalrvylswlksnksll..edvekdeklvsslsdl 240
                            ++++++ ++++ +a+ vy++w++++ +++    ++k+ ++++++s  
     KHJ34003.1  46 GhlnckicNQQFQCAVNYLSAAVDVYSDWVDACDAVAkiDSEQKEQSQTATRSFG 100
                    1555556679************************999655566666555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.50
# Mc/sec: 881.54
//
Query:       KHJ34004.1  [L=620]
Description: putative glutaminyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   3.6e-103  344.8   0.0   4.8e-103  344.3   0.0    1.2  1  tRNA-synt_1c    tRNA synthetases class I (E and Q), catalytic
    2.6e-28   99.0   0.0    7.8e-28   97.5   0.0    1.8  1  tRNA-synt_1c_C  tRNA synthetases class I (E and Q), anti-codo
  ------ inclusion threshold ------
       0.01   15.6   0.0      0.027   14.3   0.0    1.6  1  DUF1126         DUF1126 PH-like domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1c  tRNA synthetases class I (E and Q), catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  344.3   0.0    8e-107  4.8e-103       2     313 ..      89     397 ..      88     398 .. 0.98

  Alignments for each domain:
  == domain 1  score: 344.3 bits;  conditional E-value: 8e-107
                   -EEEE---SSSS-BHHHHHHHHHHHHHHHHTT-EEEEEE--SSCCC--HHHHHHHHHHHHHTT---SSEEEEGGGGHHHHHHHHHHHHHTTSEEEE- CS
  tRNA-synt_1c   2 VrtRfaPePtGyLHiGhakaallnylfAknnnGkfilRieDTdperekeeaeesiledlkwlgikwdekptyqsdrfdelkkyaeeLikkGkAYvce 98 
                   V+tRf+PeP+GyLHiGhaka+ +n++fAk ++G ++lR++DT+pe e+e+++ +i + ++wlg+k+  ++ty+sd fd+l++ aeeLi++GkAYvc+
    KHJ34004.1  89 VVTRFPPEPNGYLHIGHAKAIAINFGFAKFHGGICYLRFDDTNPEAEEEKYFIAIEKLIEWLGFKP-FQVTYSSDNFDKLYEKAEELIQRGKAYVCH 184
                   99****************************************************************.****************************** PP

                   STHHHHHHHHCCSS...HSS-TTTTS-HHHHHHHHHHHHHTTHSTTTS-EEEESSBTTSS.GGGSSTEEEEEEESGGGSBTTTBTSTSEEE-HHHHH CS
  tRNA-synt_1c  99 ctkeeleeereeqe...klgskerdrydeenlklfeeemkkgkaegekavvRlkideess.vefrDlvrgriklepqeihdlvivksdiyPtYdfav 191
                   c   e++++r+ +e   ++ +++ d+++e+nl  f + m++gk++ ++a +R+k+d e    +++Dl ++r+  +    h+++++k++iyPtYdf++
    KHJ34004.1 185 CGDTEIKAQRGGEErgpRYRCAHADQSVEHNLTHF-RAMRDGKYKPKEAFLRMKQDIEDGnPQMWDLAAYRVLDAV---HHRTGTKWKIYPTYDFTH 277
                   **********9988899999***************.9*******************99877***********8766...****************** PP

                   HHHHHHTT-SEEEEEGGGGCCHHHHHHHHHHTT-S.-EEEEEE--EEETTSB-SHHHHHHHHHTTSSSSTT-TTSCBHHHHHHCTB-HHHHHHHHHH CS
  tRNA-synt_1c 192 vidDaleeithvlrteefldntpkyiwllealglevppfiheylrlnlekkklSKRklsllvdekqvkewddlreallnflrrlGwtpekerelftr 288
                   +++D+ e+ith+l+t+ef++++ +y wl + l+++ +p+++ey rl + +++lSKRk+  lv+e++v++wdd+r+ +l ++rr+G++p ++ e++++
    KHJ34004.1 278 CLCDSFEKITHSLCTTEFIQSRISYEWLNKTLEVY-EPMQREYGRLSIAGTVLSKRKIMKLVNENHVRGWDDPRLYTLIGVRRRGVPPGAILEFVNE 373
                   ***********************************.************************************************************* PP

                   HCCCSSS.EEEEHHHHHHHHHHHHH CS
  tRNA-synt_1c 289 eeliksfdlnresksleafdrkkLe 313
                   ++++++  ++++  ++    rk+Le
    KHJ34004.1 374 IGVTTAP-TTIQLARFDQTIRKYLE 397
                   ******9.99999999999999886 PP

>> tRNA-synt_1c_C  tRNA synthetases class I (E and Q), anti-codon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.5   0.0   1.3e-31   7.8e-28       2     156 ..     401     561 ..     400     566 .. 0.92

  Alignments for each domain:
  == domain 1  score: 97.5 bits;  conditional E-value: 1.3e-31
  tRNA-synt_1c_C   2 pRymaVldpvkvtienlpegkeeelevplhpknpelgtrkvpfskeiyiereD........akrlkpgeevrLke.lynikveevekdesgevte 87 
                     pR+m Vldp+ v ie+    +e+ le+p+ pk pe+g++kv+++k++yier+D        + rl+pg+ v L +  y i++ +++ +e++++t 
      KHJ34004.1 401 PRLMLVLDPLPVYIEDA---EEMLLEMPWSPKIPEMGSHKVKLTKTVYIERADfreidskeYYRLAPGKSVGLLQiPYPIRAVSFT-KENDQITG 491
                     9**************54...589**************************************************9978********6.6688**** PP

  tRNA-synt_1c_C  88 lkleydgesleearkkkgiihWvsaeeaveaevrlYdrLfkeee.de...dfl..lnpdslkvleeglaepalan 156
                     +k+ yd+e +    k+k+ ihWv++  + ++evr   +Lfk+e+ d+    fl  +np+s+k+   +++e  + +
      KHJ34004.1 492 VKAVYDKEGK----KPKTYIHWVPE-GSKNVEVRIHQSLFKSEKpDNvegGFLndVNPESEKIWPGAMIEAGFDE 561
                     *******777....**********5.7899999********8887777888889********99*****998766 PP

>> DUF1126  DUF1126 PH-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   4.5e-06     0.027      31      76 ..     297     342 ..     278     361 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 4.5e-06
     DUF1126  31 kfvisyyleDdtieikEprqrNsG..ikggkflkRqklpk.peeeakge 76 
                 +  isy   + t+e++Ep qr  G     g++l+++k++k  +e   + 
  KHJ34004.1 297 QSRISYEWLNKTLEVYEPMQREYGrlSIAGTVLSKRKIMKlVNE---NH 342
                 6678999999***************9559*********995332...23 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (620 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       762  (0.042501); expected 358.6 (0.02)
Passed bias filter:                      573  (0.0319594); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 4315.19
//
Query:       KHJ34005.1  [L=320]
Description: hypothetical protein EV44_g3125 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.036   14.4   0.7       0.11   12.8   0.7    1.8  1  Retrotrans_gag  Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.7     6e-06      0.11      27      95 ..     126     195 ..     109     196 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6e-06
  Retrotrans_gag  27 esWkdlkkaflktflpserkdqleeelsslrQ.gtesvreYvtrfktladqldevlteeakiekflaGLn 95 
                       W++l ++f+++f+++e+++++ +  s++ Q +++ + ++++  +  ++ ++e +t  ak ++f a Ln
      KHJ34005.1 126 YCWRNLAEHFREQFEDKEERQAASKYVSRMEQsHNQLFLDFLKDSEYRMAPCREAFTPLAKSMQFKASLN 195
                     47**************9999999999******99999999999999999999999999888888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      581  (0.0324056); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2462.03
//
Query:       KHJ34006.1  [L=2091]
Description: putative fatty acid synthase beta subunit dehydratase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   4.4e-154  512.6   0.0   8.3e-154  511.7   0.0    1.5  1  DUF1729          Domain of unknown function (DUF1729)
    1.7e-89  300.5   0.0      9e-89  298.1   0.0    2.0  2  Acyl_transf_1    Acyl transferase domain
    3.8e-52  176.0   0.1    1.5e-51  174.1   0.1    2.1  1  FAS_meander      Fatty acid synthase meander beta sheet domai
    9.7e-38  128.5   0.0    2.7e-37  127.1   0.0    1.8  1  MaoC_dehydratas  MaoC like domain
    3.6e-35  120.8   0.0    1.4e-34  118.9   0.0    2.0  2  FAS_N            N-terminal domain in fatty acid synthase sub
    7.2e-35  120.8   0.1      2e-34  119.4   0.0    1.8  2  SAT              Starter unit:ACP transacylase in aflatoxin b
    4.2e-23   81.9   0.0    1.7e-22   79.9   0.0    2.1  1  MaoC_dehydrat_N  N-terminal half of MaoC dehydratase


Domain annotation for each model (and alignments):
>> DUF1729  Domain of unknown function (DUF1729)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  511.7   0.0  3.2e-157  8.3e-154       1     353 []     739    1088 ..     739    1088 .. 0.99

  Alignments for each domain:
  == domain 1  score: 511.7 bits;  conditional E-value: 3.2e-157
     DUF1729    1 piilqwtggraGGHHSledleaplletYakiRkqkNvvlvvGsGlgdaedsieyltGeWskelglppmPvdgillgsavmvakEaktseevkqlive 97  
                  p++lqwtggr+GGHHS+ed+++p+l++Y++iR+++N++lv+GsG+g a+d+++y+tGeWs ++g+ppmP+dg l+gs+vm+akEa+ts ++k++i e
  KHJ34006.1  739 PVMLQWTGGRGGGHHSFEDFHQPILQMYGRIRRCENLILVAGSGFGGAKDTYPYFTGEWSAKYGYPPMPFDGCLFGSRVMTAKEARTSLNAKKAITE 835 
                  699********************************************************************************************** PP

     DUF1729   98 tpGvkdeeWeatykkpaGgvvsvrSelgepihkianraaklwkeldetifsleavekrkaalekkrdeiierlnkdyakpwfavdeegelveleemt 194 
                  ++G++d++We+tyk paGgv++vrSe+gepihk+a+r++++w e+d +ifsl ++ekr+ +l+k+rd+ii++ln d++k+wf+ ++ege v+le+mt
  KHJ34006.1  836 AEGLDDSDWEKTYKGPAGGVITVRSEMGEPIHKLATRGVRFWAEMDAKIFSL-PKEKRVPELKKNRDYIIKKLNDDFQKVWFGRNKEGEAVDLEDMT 931 
                  ****************************************************.******************************************** PP

     DUF1729  195 YsevvrRlveLaflksrkewidpswkklfqdllqrveeRltaeehgeaesllesvealedPaeavetllaaypsaeaqlltaeDvawflqlvqrrgi 291 
                  Ysevv R+v+L+f+k++++wid+s+++l+ d+++rveeR+  ++   + sll+s+++l+ P+ ++e +l  yp++++ql++a+Dv++fl l+qrrg+
  KHJ34006.1  932 YSEVVYRMVDLMFVKHENRWIDKSYERLVGDFIRRVEERF--THVPGHPSLLQSYSELDIPYPTIERILSSYPETATQLINAQDVQHFLLLCQRRGQ 1026
                  ****************************************..33356899*********************************************** PP

     DUF1729  292 KPvpFvPvldedfeaffkkdslwqsedldavvdqdaqrviilqgpvavryitkvdepvkeil 353 
                  KP  FvP lde+fe+ffkkdslwqsedl+av+dqd+ r++ilqgp av+y+t v+ep+keil
  KHJ34006.1 1027 KPPTFVPSLDENFEFFFKKDSLWQSEDLEAVIDQDVGRTCILQGPTAVKYSTIVNEPIKEIL 1088
                  ************************************************************98 PP

>> Acyl_transf_1  Acyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.39     1e+03      32     100 ..     217     295 ..     210     328 .. 0.72
   2 !  298.1   0.0   3.5e-92     9e-89       2     317 ..    1692    2064 ..    1691    2065 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.39
                    HHHHCCHHHT--HHHHHHS--T....TGGGSHHHHHHHHHHHHHHHHHHH.HHTT-TTSEE.......EE-TTHHHHHHHH CS
  Acyl_transf_1  32 adeafksqygfsvldvlrnnpe....glldaiqfvqpaLaavqialaell.kskGvrpaav.......vGHSlGElAaavv 100
                    ad+ f +  g+ +l  l   ++    + + +  +++p + +vq+a +++  k  G++p+ +        GHS+G + +av 
     KHJ34006.1 217 ADKLFSK--GLDILGWLHHPETtpdvNYMISAPVSFPLIGLVQLAHYAVScKVLGLQPGQFresisgtTGHSQGIVISAVL 295
                    5555555..66666666665555555777778889999999*****99986899999987655545547999998755543 PP

  == domain 2  score: 298.1 bits;  conditional E-value: 3.5e-92
                     EEE--TT---TTTTCCHHHC-HHHHHHHHHHHHHCCHHHT--HHHHHHS--T.......................................... CS
  Acyl_transf_1    2 fvfsGqGsQwaGMGmeLlktskafaaviaradeafksqygfsvldvlrnnpe.......................................... 53  
                     +vf+GqGsQ++GMGmeL++ts+++++v++rad++f ++ygfs++++++nnp+                                          
     KHJ34006.1 1692 YVFTGQGSQEQGMGMELYATSAVAKEVWDRADKHFMDNYGFSITNIVKNNPKeltihfggprgkairqnymsmtfetvgsdgatksekifkein 1785
                     9********************************************************************************************* PP

                     ............TGGGSHHHHHHHHHHHHHHHHHHHHHTT..-TTSEEEE-TTHHHHHHHHCCSSSHHHHHHHHHHHHHHHHHHTS-EECCEEC CS
  Acyl_transf_1   54 ............glldaiqfvqpaLaavqialaellkskG..vrpaavvGHSlGElAaavvagalsseeallavvlrsrlmmqlagpgdmaave 133 
                                 gll+a+qf+qpaL+++++a +e+++skG  +r+  ++GHSlGE++a+++++ ++++e+l++vv++++l+mq+a+++d+ +++
     KHJ34006.1 1786 entssytymsptGLLSATQFTQPALTLMEKASFEDMRSKGlvQRDSSFAGHSLGEYSALAALAEVMPIESLVSVVFYRGLTMQVAVERDETGRS 1879
                     *****************************************999************************************************** PP

                     S.HHHHHHH..TT.EEEEEEECCCCECCEEHHHHHHHHHHHHHCC.CCEEECCCEECTTCCCCCCCCHHHHHHHHCCCHHCHHTTBEHCCCHHH CS
  Acyl_transf_1  134 laeeeeklrcqddvvgavansprrvvisgsqealrelvervskegvgalvenvnvavhspqvdaiadalasaladiaprkpkvakisstsldes 227 
                     +             + ++a +p+r+  +++++al+++ve++++ + g+l e+vn++v + q+++++d +a++++  + ++ k ++i++ +l + 
     KHJ34006.1 1880 N-------------YSMCAVNPSRISKTFNEQALQYVVENIAEST-GWLLEIVNYNVANMQYVCAGDLRALDTLAGVTNFLKAQRIDIQQLMQT 1959
                     *.............*******************************.*****************************999***********99999 PP

                     .....HHHCHHHHHHHHHHHCHCCHCCHHTTS.SSECC-CCEECSSSSCCHCCCCCCCHH.......GGG-TCCCCCCTEETTSS-..HHHCHH CS
  Acyl_transf_1  228 .....serelsaeywvanlrspvrfaeavlsa.aetiplvfveispHslllaalektlks.......aedvksatlvGklkrdltd..flvtfl 306 
                          ++  l +++++   +  +++++ +l++ ++tipl ++++++Hs+ l+ ++k+++s          + + +l+Gk+++++t+  f   ++
     KHJ34006.1 1960 lsiddVKSRLMEIINECANQTKSKPQPVELQRgFATIPLKGIDVPFHSTFLRSGVKPFRSfllkkinRTSIDPSKLIGKYIPNVTArpFDISKE 2053
                     9999999**********************************************************99999************************ PP

                     HHHHHHHHCT- CS
  Acyl_transf_1  307 yllakahltgs 317 
                     y+ +++ lt s
     KHJ34006.1 2054 YFEDVYRLTNS 2064
                     ******99976 PP

>> FAS_meander  Fatty acid synthase meander beta sheet domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.1   0.1   5.7e-55   1.5e-51       3     146 .]    1153    1296 ..    1151    1296 .. 0.99

  Alignments for each domain:
  == domain 1  score: 174.1 bits;  conditional E-value: 5.7e-55
  FAS_meander    3 elpseeewlellageelsWlralltsetivqgkklveNPlrrllaprkgqlveieeadspektvvtvkeakesgelkkaveiklsedkeIsvtlie 98  
                    lp+e++w++llag+++sW+ al+ts++++q+kk+ +NP++r++ap++g +vei+ +++p+ktv+ v+e+ + ++++k++ei++s+++eI+v+li+
   KHJ34006.1 1153 PLPDEDSWFSLLAGSKRSWRYALFTSKVFIQNKKFETNPIKRIFAPSRGLYVEINFPNEPSKTVINVSEQPRINQYVKVIEISFSGKNEITVNLIK 1248
                   79********************************************************************************************** PP

  FAS_meander   99 ertaegesvpLeleFeYkpetglapIhEvmegrndrikeFYwklWfge 146 
                   e +a g++++L+l+++Y+pe+g+apI+Evm++rn+rikeFYw+ Wfg+
   KHJ34006.1 1249 ETNALGKPISLPLKYTYHPEAGYAPIREVMSDRNNRIKEFYWRSWFGN 1296
                   **********************************************96 PP

>> MaoC_dehydratas  MaoC like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.1   0.0   1.1e-40   2.7e-37       4     122 ..    1549    1676 ..    1546    1677 .. 0.98

  Alignments for each domain:
  == domain 1  score: 127.1 bits;  conditional E-value: 1.1e-40
                       CCTTSEEEEEEEEEEE.........HHHHHHHHHHHT---GGGT-HHHHHHTTTSSSB--HHHHHHHHHHHHHHHHSTTEGGGEEEEEEEE- CS
  MaoC_dehydratas    4 naigekvetekeitvt.........eadialyalvsgDlnpiHvdpefAkkagfggpIahGmltlaivaklveeelgdnvvarvgeikvrFt 86  
                       ++i+++v++e+ i+++         +a++++ya+vsgD+npiHv++ f+ +ag++g+I+hGm+++a+v++lve+++++n + rv++++++ t
       KHJ34006.1 1549 SSIEQPVNFENAIPLSgktplqiraPASNETYARVSGDYNPIHVSRVFSNYAGLPGTITHGMYSSAAVRSLVETWAAENHIGRVRSFHASLT 1640
                       579***************************************************************************************** PP

                       S--BTTCEEEEEEEEEEEEEEEEEEEEEEEEEEEEE CS
  MaoC_dehydratas   87 kpVlpgdtlkvelevvgkrdvrktkkvevtkevtee 122 
                       ++Vlp+d+++v+l++vg+ ++rk++kve++++v+ee
       KHJ34006.1 1641 GMVLPNDEIEVKLQHVGMVAGRKIIKVEASNKVSEE 1676
                       *******************************99886 PP

>> FAS_N  N-terminal domain in fatty acid synthase subunit beta
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.9   0.0   5.4e-38   1.4e-34       1     126 [.      20     144 ..      20     146 .. 0.95
   2 ?   -2.7   0.0       2.1   5.4e+03      27      66 ..     905     947 ..     901     971 .. 0.72

  Alignments for each domain:
  == domain 1  score: 118.9 bits;  conditional E-value: 5.4e-38
       FAS_N   1 slrplslthgslevsilvpaslylaaeqLrdeFtatlvapseeleqeeeplseieLlakFLgyvaksie.stesstsqfedvlklvleefessyLkknd 98 
                 s+rpl+++hg le++il p++l+ +a+q++d F   l+  +eel+q++ep+s+ eL+a+++g+v +++e  ++++++++e++l+l+l efe+ +L++n+
  KHJ34006.1  20 SVRPLTISHGPLEHTILFPTHLHYHATQIKDRFLSALPTATEELAQDDEPSSVAELIARYMGFVVREVEnGEDDAQGSYEELLNLILSEFERVFLRGNE 118
                 89*******************************************************************65669************************* PP

       FAS_N  99 ihalvsnLpsettllakkeviraYykal 126
                 +halvs Lp  +  ++k e+ir+Yy+a+
  KHJ34006.1 119 VHALVSTLP--GIETKKLEIIRSYYTAR 144
                 *********..44457778*******97 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.1
       FAS_N  27 eqLrdeFtatlvaps.eeleqeeeplseieLlakF..Lgyvak 66 
                 ++L+d+F++    ++ e+++ + e+++  e + +   L +v++
  KHJ34006.1 905 KKLNDDFQKVWFGRNkEGEAVDLEDMTYSEVVYRMvdLMFVKH 947
                 689******8776665788888888888888777633445554 PP

>> SAT  Starter unit:ACP transacylase in aflatoxin biosynthesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.4   0.0   7.7e-38     2e-34       2     238 ..     172     424 ..     171     426 .. 0.86
   2 ?   -2.5   0.0       1.4   3.5e+03      93     130 ..    1819    1857 ..    1798    1912 .. 0.66

  Alignments for each domain:
  == domain 1  score: 119.4 bits;  conditional E-value: 7.7e-38
         SAT   2 lFGDq..tadvlpeLrkLlqakenplLrsFLekasealraeisrlpaaerkslp..rf.tslqellerysesglkspalssallciaqlaqfivy...l 92 
                 +FG+q  t+d++ eLr+L+  ++ ++L+s++ ++++ l+   ++  +a++ + +  ++  +l++++++++ ++  s+++s++l++++qla++ v    l
  KHJ34006.1 172 IFGGQgnTEDYFNELRELH-TTYPEFLNSLIHASADLLQSLSRDQ-RADKLFSKglDIlGWLHHPETTPDVNYMISAPVSFPLIGLVQLAHYAVSckvL 268
                 7*****8888*********.***********99999999877765.5555444457666***********************************95544 PP

         SAT  93 eenpeeypspestylvGlCtGllaAaavacskslseLvplaveavrvafrlGlevar...........vaarle......egsssssesWslavtglse 174
                 + +p ++  ++ ++ +G+++G++ +a+++++++++++ +l+v a+ ++f++G+++++                +      eg ++    ++l++++ls+
  KHJ34006.1 269 GLQPGQFR-ESISGTTGHSQGIVISAVLSAADTWESFEKLSVSALSILFWIGSRSQHiyprtslapsiL----QdsvnngEGVPT----PMLSIRDLSQ 358
                 55555554.3477********************************************987777644443....355334445555....********** PP

         SAT 175 eelekalaefneekglppasrvyisavssss.vtisGpPstl...eallksskakkkkkksklpiyap 238
                 ++++ +++++n++ +  + +++ is+v+s + ++++GpP +l   +  l++ ka + ++++++p++++
  KHJ34006.1 359 KQVQVHVDATNQYLP--EDRHISISLVNSAHnLIVTGPPISLyglNLQLRKFKAPSGLDQTRIPFTER 424
                 *************99..78*********9888************9********************986 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.4
         SAT   93 eenpeeypspestylvGlCtGllaAaav.acskslseLv 130 
                  e+ ++++  + ++  +G++ G  +A a+ a    +++Lv
  KHJ34006.1 1819 EDMRSKGLVQRDSSFAGHSLGEYSALAAlAEVMPIESLV 1857
                  555555565668889999999988866524444444443 PP

>> MaoC_dehydrat_N  N-terminal half of MaoC dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.9   0.0   6.7e-26   1.7e-22       7     131 ..    1309    1429 ..    1304    1430 .. 0.92

  Alignments for each domain:
  == domain 1  score: 79.9 bits;  conditional E-value: 6.7e-26
  MaoC_dehydrat_N    7 fepvkaevereavrefakavgetnpayldeeaaraagyrsliaPptflivlatkap..ell.ealgidlsrllhgeqefey...hepiraGD 92  
                       f + k  ++ ea+++f++avg+t++a++d+  +      +++aP++f+iv+++ka    ++ +++++dl +l+h+++ f++   +ep++ GD
       KHJ34006.1 1309 FFGGKVCITSEAIKDFVHAVGNTQEAFVDRPGK------EIFAPMDFAIVVGWKAItkPIFpKDIDGDLLKLVHLSNGFRMlpgAEPLKMGD 1394
                       5567889*************************8......9*************886664446999******************99******* PP

  MaoC_dehydrat_N   93 elttesriadvydkkgvGalefivvettvtnqrGepvat 131 
                       e+ t+++i++v ++   +++++++v+ t+t ++G+pv++
       KHJ34006.1 1395 EVETTAQINAVINQ---DSGKMVEVCGTIT-RSGKPVME 1429
                       *************9...68***********.******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2091 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       574  (0.0320152); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.09u 0.30s 00:00:01.39 Elapsed: 00:00:00.46
# Mc/sec: 13551.32
//
Query:       KHJ34007.1  [L=1825]
Description: putative fatty acid synthase subunit alpha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.5e-77  258.3   0.0    1.4e-76  256.6   0.0    1.9  2  FAS_I_H          Fatty acid synthase type I helical domain
    5.3e-56  189.4   0.0    1.3e-55  188.1   0.0    1.7  1  Fas_alpha_ACP    Fatty acid synthase subunit alpha Acyl carri
    5.6e-20   72.0   0.0      1e-19   71.1   0.0    1.4  1  ketoacyl-synt    Beta-ketoacyl synthase, N-terminal domain
    2.7e-17   63.0   0.0    5.8e-17   61.9   0.0    1.6  1  ACPS             4'-phosphopantetheinyl transferase superfami
    1.2e-11   44.6   0.0    4.4e-11   42.8   0.0    1.9  2  Ketoacyl-synt_C  Beta-ketoacyl synthase, C-terminal domain
  ------ inclusion threshold ------
      0.053   13.4   0.0       0.15   11.9   0.0    1.8  1  KR               KR domain


Domain annotation for each model (and alignments):
>> FAS_I_H  Fatty acid synthase type I helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       2.1   6.4e+03     125     153 ..      58      86 ..      51      89 .. 0.79
   2 !  256.6   0.0   4.8e-80   1.4e-76       1     202 [.     292     493 ..     292     494 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.1
     FAS_I_H 125 kkakassgekyaaakelgekllknarsal 153
                 + + as+ e y+aak + +++l++ ++a 
  KHJ34007.1  58 QRTLASKYEAYDAAKSVQRQILCYNKDAK 86 
                 4556788999***********99988765 PP

  == domain 2  score: 256.6 bits;  conditional E-value: 4.8e-80
     FAS_I_H   1 tkkqnelvrqqlevlaryLgvdseasereaaessaevaelqaeLdlweaEhgdeylkgikpiFdakKaRrydSaWNwarqdilklyydllqgrlkdvdr 99 
                 tk+q++l++qqle++aryL++d ++++++  +s++   +lq++Ldlw++Ehgd y++gi+p+F+++KaR+ydSaWNw+rqd+l++yyd+++grlk vdr
  KHJ34007.1 292 TKDQRALFKQQLELFARYLKIDLRSGDKSFINSQQSSLALQKQLDLWNTEHGDFYASGIEPVFSPLKARVYDSAWNWVRQDALTMYYDIIFGRLKVVDR 390
                 689************************************************************************************************ PP

     FAS_I_H 100 eiksrlqrilnRadenlvdlvqyllkkakassgekyaaakelgekllknarsalsaapvyvelseptaPrttidekGnieYeEvpragvqeledyveel 198
                 ei sr+ ri+nR++++l++++qy+++++++++ge+y++akelg +l++n+++ +s++p y++++ pt+P+ttid++Gn+eY E+pr +v++le yv+e+
  KHJ34007.1 391 EIVSRCIRIMNRSNPTLLEFMQYHIDNCPTDRGETYQLAKELGLQLIENCKEVMSTPPCYKDVAIPTGPHTTIDPRGNLEYAEIPRPSVRKLELYVREM 489
                 *************************************************************************************************** PP

     FAS_I_H 199 ksGs 202
                 ++G+
  KHJ34007.1 490 AEGG 493
                 **97 PP

>> Fas_alpha_ACP  Fatty acid synthase subunit alpha Acyl carrier domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.1   0.0   4.4e-59   1.3e-55      39     162 .]     142     265 ..     134     265 .. 0.98

  Alignments for each domain:
  == domain 1  score: 188.1 bits;  conditional E-value: 4.4e-59
  Fas_alpha_ACP  39 kStlqNEilgdLqaEfgslpekaedlpleelaealqesfsGklGkqssslisrlvsskmpggfnlaairkyLekrwglgpgrqdsvlllavtsePa 134
                    kStlqNEilgdL++Efgs+pek+ed+pl+el++++q++f+G+lGkqsssli+rl+sskmpggfn+++ rkyLe+rwgl++grqd+vllla+t+eP 
     KHJ34007.1 142 KSTLQNEILGDLGKEFGSTPEKPEDTPLDELGASMQATFNGQLGKQSSSLIARLISSKMPGGFNITTTRKYLESRWGLASGRQDGVLLLALTMEPP 237
                    9*********************************************************************************************** PP

  Fas_alpha_ACP 135 kRlgseaeAkafldsvvqkyakkagisL 162
                    +Rl+s+ +Akaf+d+v++kya+ agi+L
     KHJ34007.1 238 ARLSSDVDAKAFFDDVAHKYATIAGINL 265
                    **************************97 PP

>> ketoacyl-synt  Beta-ketoacyl synthase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   0.0   3.4e-23     1e-19      50     250 ..    1119    1327 ..    1101    1330 .. 0.83

  Alignments for each domain:
  == domain 1  score: 71.1 bits;  conditional E-value: 3.4e-23
                     STTEEE-BSS.EEE..STTEGGTTSTHHHHHHHCTS-HHHHHHHHHHHHHHHHHTS-HHTC.....TTGGEEEEEEESSTHHHHHHHHHHHTT. CS
  ketoacyl-synt   50 paraagkiktklggfldvddfdpeffgispreaeamdpqqrllleaawealedagltpeel.....dgsrvgvfiGvgagdyaalaaldedgs. 137 
                     ++ +ag+i+t          ++++++gi+++   ++dp++ ++l+++ e l  +g+t+        + s+vg++iG+g+g ++al+ +++d   
     KHJ34007.1 1119 DRLVAGQIPT---------GWNAKYYGIPDDIISQVDPVTLFVLVCTVESLLASGITDPYEfykyvHLSEVGNCIGSGIGGTSALRGMYKDRYl 1203
                     5667777777.........7899*********************************77666577766667**********99877666655544 PP

                     GGGSCTTHHHHHSTTHHHHHHHHH.HT--SSEEEEESGGGHHHHHHHHHHHHHHTTS-SEEEEEEEE---SHHHHHHHHHTTBB-TT.SG.... CS
  ketoacyl-synt  138 evkaspkavgavlanviagrisya.lglrGpsvtvdtACsSslvavhaavqslrsgeadvalaGGvellltpeavagfsaagllspd.gr.... 225 
                     ++    ++++    n++++ +++     +Gp  t++ AC+++   ++  ++ +++g+a v+++GG + ++++e+ + f++++++s+  +     
     KHJ34007.1 1204 DKPLQKDILQESFINTMSAWVNMLlISSTGPIKTPVGACATAVESIDIGYETIVEGKARVCFVGGFD-DFQEEGSYEFANMKATSNAvDEfahg 1296
                     3333335666689**********9889****************************************.9999**********888876334445 PP

                     ...GGTTBTTB...-SB-BB-EEEEEEEEEC CS
  ketoacyl-synt  226 ...ckafdpka...dGfvlGEGvGavvLkrl 250 
                         + ++p     +Gf+ ++G+G+ v++++
     KHJ34007.1 1297 rtpKEMSRPTTttrNGFMESQGCGIQVIMTA 1327
                     56655666655777***********999876 PP

>> ACPS  4'-phosphopantetheinyl transferase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.9   0.0   1.9e-20   5.8e-17       1     106 [.    1707    1807 ..    1707    1823 .. 0.85

  Alignments for each domain:
  == domain 1  score: 61.9 bits;  conditional E-value: 1.9e-20
                  EEEEEEEEHHHHH.HHH-----HHHHHS-HHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHT...TS-SSSS--GGG-EEEE-TTS-EEEE-S-SSE CS
        ACPS    1 gvGiDieklsrlrkrvkrrgakilkrifteeErkllkssdeearaelfarlWaaKEAllKal...gpglrklldfksievledstgrptlellseak 94  
                  +vG+D+e++s l+     +++ +l+r ft+ E++++k++++++    fa+ W+aKEA++K+l   g+g     ++k+ie+++d++g+p ++l+++a+
  KHJ34007.1 1707 RVGVDVEDISSLN-I---ENETFLERNFTNWEISYCKKAPHPQS--SFAGKWSAKEAVFKSLgvkGKGA--GAPLKEIEIINDEKGAPIVTLHGDAA 1795
                  59*****777777.4...7999*********************9..****************5555555..************************** PP

                  EEEEEEE-.... CS
        ACPS   95 kkawkleslkid 106 
                  + a + +++ + 
  KHJ34007.1 1796 RAAKSAGVKEVT 1807
                  999888775544 PP

>> Ketoacyl-synt_C  Beta-ketoacyl synthase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.8   0.0   1.5e-14   4.4e-11      29     117 ..    1460    1550 ..    1435    1551 .. 0.88
   2 ?   -2.6   0.0       1.8   5.5e+03      23      48 ..    1694    1719 ..    1686    1721 .. 0.81

  Alignments for each domain:
  == domain 1  score: 42.8 bits;  conditional E-value: 1.5e-14
                       HHHHHHHHHT--GGGEEEEE-SS-SSHHHHHHHHHHHHHHHGGGGG..SCTSEEE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT- CS
  Ketoacyl-synt_C   29 aiekalaeagvdpedvdyveahgtgtplgDpiElealkkvfgekar..kqplavgSvKsniGHleaAaGvaelikvvlalkhgvipptlnl 117 
                        ++ ala+ g++ +d d+ + hgt+t ++D++E + + + +++ +r   + +    +K ++GH ++AaG+  +  ++++l++g +p + n 
       KHJ34007.1 1460 PLRGALATWGLTIDDLDVASFHGTSTVANDKNESSVICSQLKHLGRkkGNAVLGIFQKYLTGHPKGAAGAWMMNGCLQVLNTGLVPGNRNA 1550
                       5789**************************************999975333333469******************************9986 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.8
                       HHHHHHHHHHHHHHHT--GGGEEEEE CS
  Ketoacyl-synt_C   23 geaqaraiekalaeagvdpedvdyve 48  
                        e++a+   +a +++gvd ed++ ++
       KHJ34007.1 1694 VESLAKGASNATNRVGVDVEDISSLN 1719
                       5677888999************9876 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   5.1e-05      0.15       4      79 ..     618     695 ..     616     710 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 5.1e-05
                 EEET.TTSHHHHHHHHHHHHHHS-EEEEE-SS...--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHS CS
          KR   4 litG.GlGgLGlelarwlaekgarhlvllsRsa.aadedskaliaelealgaevevvaaDvsdkdavealleeikaee 79 
                 l+tG G+G++G e+   l++ ga+ +v +sR + +++e  ++  a+  ++g +  vv+    +k++veal++ i +++
  KHJ34007.1 618 LMTGaGAGSIGAEVLIGLISGGAKVVVTTSRFSrEVTEYYQSIYARHGSKGSQLIVVPFNQGSKQDVEALVDYIYDTK 695
                 6788579************************8536667777778888889********************99887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1825 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.00u 0.29s 00:00:01.29 Elapsed: 00:00:00.44
# Mc/sec: 12430.63
//
Query:       KHJ34008.1  [L=78]
Description: putative heat repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-15   55.3   2.1    5.8e-15   55.1   2.1    1.1  1  Complex1_LYR    Complex 1 protein (LYR family)
    8.2e-05   23.3   0.7     0.0001   23.0   0.7    1.1  1  Complex1_LYR_2  Complex1_LYR-like
     0.0034   17.9   0.7      0.015   15.9   0.3    1.7  2  Complex1_LYR_1  Complex1_LYR-like


Domain annotation for each model (and alignments):
>> Complex1_LYR  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.1   2.1   9.7e-19   5.8e-15       1      58 [.       8      66 ..       8      67 .. 0.96

  Alignments for each domain:
  == domain 1  score: 55.1 bits;  conditional E-value: 9.7e-19
  Complex1_LYR  1 rqvLsLYRalLRearkfpdyntreyfrrriRdeFrknkh..vtDpekieellkkgreeLe 58
                  r+vL LYR +LR++rk+p+++ r +f   +R++F+ n h   + +  ie+ll+kgr++Le
    KHJ34008.1  8 REVLLLYRECLRACRKKPSDT-RPHFEKFTRAKFDMNLHlnKKEFMTIEYLLRKGRRQLE 66
                  69*******************.**************9998889****************8 PP

>> Complex1_LYR_2  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.7   1.7e-08    0.0001       1      56 [.      10      67 ..      10      72 .. 0.86

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 1.7e-08
  Complex1_LYR_2  1 vlsLYrrllrelrelppelrslgdayvraefrrhkhlk.npe.eialflknqreYael 56
                    vl LYr+ lr+ r++p + r ++    ra f+ + hl+ ++   i  +l++ r  +el
      KHJ34008.1 10 VLLLYRECLRACRKKPSDTRPHFEKFTRAKFDMNLHLNkKEFmTIEYLLRKGRRQLEL 67
                    688**********99******************9999954446777888888877776 PP

>> Complex1_LYR_1  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.3   2.5e-06     0.015       1      49 [.       8      54 ..       8      62 .. 0.79
   2 ?    2.9   0.1     0.029   1.7e+02      79      95 ..      52      67 ..      41      69 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 2.5e-06
  Complex1_LYR_1  1 reklrlyrallkaarrfPlrsrreivaeevraafrhplndslttke.vdy 49
                    re+l lyr+ l+a+r+ P   r     +  ra+f   +n  l++ke ++ 
      KHJ34008.1  8 REVLLLYRECLRACRKKPSDTRP-HFEKFTRAKFD--MNLHLNKKEfMTI 54
                    799***************97766.77788999999..8888888886444 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.029
  Complex1_LYR_1 79 reieylslerdrrrlre 95
                      ieyl l+++rr+l++
      KHJ34008.1 52 MTIEYL-LRKGRRQLEL 67
                    468999.*******975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       471  (0.0262703); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 580.43
//
Query:       KHJ34009.1  [L=486]
Description: putative duf185 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      6e-80  268.6   0.0    7.3e-80  268.4   0.0    1.1  1  Methyltransf_28  Putative S-adenosyl-L-methionine-dependent m


Domain annotation for each model (and alignments):
>> Methyltransf_28  Putative S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  268.4   0.0   4.1e-84   7.3e-80       1     262 []     103     411 ..     103     411 .. 0.96

  Alignments for each domain:
  == domain 1  score: 268.4 bits;  conditional E-value: 4.1e-84
  Methyltransf_28   1 llaiwlleewqalgrpskklrliElGpGkGtLmadvLrtlrkflpefyea.leyhlvEaSpqlrerQknrLkekakevkk....estvkslgvk 89 
                      l++iw+++ew a+++ +k+++liE+GpG+GtLm+d+Lrt+r+f +++ ++  +++lvE+Sp+lr+ Q++ L+++ ++++     +s +k++ v+
       KHJ34009.1 103 LIGIWFVAEWIAQNKLDKRIELIEIGPGRGTLMDDILRTIRNF-KQMSSSiDNIYLVETSPSLRNSQREVLCGDVPMENIsngyRSMSKYMHVP 195
                      79***********999999************************.9**9999************************99999************** PP

  Methyltransf_28  90 veWleelkeip...eetgfilanEffDaLPihqfe............................rtedg..wrellveltpekkakekefrltls 150
                      + W+++++ ip   e+t fi+a+EffDaLPih+f+                            r++d+  wre++v+  +e +++ +ef+ltls
       KHJ34009.1 196 ITWVDNIRFIPpanEKTSFIVAHEFFDALPIHAFQsveifdssenttkehypenqflykaplgRNSDKiqWREMVVSTVKEPSKDTSEFQLTLS 289
                      **********88***************************************************5555556*********987777779****** PP

  Methyltransf_28 151 psetdplsevlpklskrlka..leegsrieispeaeallediaerlak........egGaaLiiDYgesssepngtLrairkhklvdpleepGe 234
                      +++t p+s +lp++s r+++   ++gs+ieispe++ +++++a+r+ +        ++Gaa+iiDYg+ +++p+++Lr+ir+hk v+p++ +G+
       KHJ34009.1 290 KNST-PHSLYLPEISTRYRKlkKTPGSVIEISPESHVYAQEFARRIGGsssapkpfPSGAAIIIDYGPLNTIPSNSLRGIRDHKRVSPFSFAGL 382
                      ****.9**************88889*******************************************99************************ PP

  Methyltransf_28 235 vDltadvDFtalaeaaeeasg.levlgpv 262
                      vDl+advDF alaeaa +as  +ev+gpv
       KHJ34009.1 383 VDLSADVDFFALAEAALAASPeVEVYGPV 411
                      ****************9999899999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3445.72
//
Query:       KHJ34010.1  [L=669]
Description: putative mitochondrial protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.2e-157  525.1   0.0   1.5e-157  524.7   0.0    1.1  1  GIDA           Glucose inhibited division protein A
    3.8e-68  229.8   0.0    6.8e-68  229.0   0.0    1.4  1  GIDA_assoc     GidA associated domain
    3.8e-06   26.5   0.1    6.3e-06   25.8   0.1    1.3  1  FAD_oxidored   FAD dependent oxidoreductase
    2.1e-05   23.9   0.2    5.2e-05   22.6   0.2    1.7  1  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.013   14.6   3.1      0.034   13.2   2.1    2.1  2  FAD_binding_2  FAD binding domain
      0.043   13.8   0.0      0.043   13.8   0.0    1.6  2  NAD_binding_9  FAD-NAD(P)-binding
      0.058   13.0   1.9       0.25   10.9   0.0    2.1  2  DAO            FAD dependent oxidoreductase
      0.068   12.5   0.1       0.12   11.7   0.1    1.3  1  AlaDh_PNT_C    Alanine dehydrogenase/PNT, C-terminal domain
       0.15   10.8   1.6       0.83    8.3   0.6    2.2  2  HI0933_like    HI0933-like protein


Domain annotation for each model (and alignments):
>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  524.7   0.0  7.4e-161  1.5e-157       1     391 [.      41     434 ..      41     435 .. 0.98

  Alignments for each domain:
  == domain 1  score: 524.7 bits;  conditional E-value: 7.4e-161
                 CEEEE-SSHHHHHHHHHHHHTT--EEEEES-GGGTT--SSSSEEE-TTHHHHHHHHHHHT-SHHHHHHHHEEEEEEESTTS-CCC-EEEEEE-HHHHHH CS
        GIDA   1 dviViGgGhAGceAAlaaarlGakvlLithkldtiaelsCnpsiggiakgllvrEidalggliikaadkagiqfrilNrskGpavralraqvdrelysk 99 
                 +v+ViGgGhAG+eA++ aar+Ga+++Lit+kld+i+ +sCnps+ggi+kg+l rEidal+gl ++++dkag+qf++lNr+kGpav+++raq+drely+k
  KHJ34010.1  41 EVVVIGGGHAGSEACAGAARSGARTALITPKLDNIGVCSCNPSFGGIGKGTLIREIDALDGLAGRIIDKAGVQFKVLNRKKGPAVWGPRAQIDRELYKK 139
                 59************************************************************************************************* PP

                 HHHHHHHTSTTEEEEES-EEEEEECT.....TEEEEEEETTS-EEEECEEEE--TT-BT-EEEETTEEEESSCTTC--B-THHHHHHHTT--EEEEEEE CS
        GIDA 100 evteklenepnleiieeeveelivee.....kkvkgvvtedgetikakavviatGtflkgkihigekelsaGrlgeltseglseslkelgfellrlktg 193
                 +++e+le+++nl+i+ ++ve++iv+e     k+++gv++e++e+i +++vv++tGtfl g+ihig + +++Gr+ge ++ gls+sl++ gf+l+rlktg
  KHJ34010.1 140 YMREELETYQNLQIVLGSVEDIIVSEeedgkKRIRGVRLESNEVILTNHVVLTTGTFLGGEIHIGLDVYPSGRIGEAATFGLSKSLRDAGFSLGRLKTG 238
                 ************************9999**9******************************************************************** PP

                 E--EEEGGGS-TTTSEEE---SS-B-SSSSSSSTC.G----EEEEE--HHHHHHHHCTCCC-T.T----B--S-CCC-SSTCCCCCCSTT-S--EEEEE CS
        GIDA 194 tppridkesidfskleeqsgdkegeefsylnkpln.keqvecfltatneathkiikenlkksaklfegcieelgprycpsiedkivrladkeshqvfLe 291
                 tppr++k+si+f+++e+q gd+++ +fsylnk+++ ++q+ c+ t+tne  h++i++nl+ks+ +++++++  gprycps+e+ki+r++d+e+h+++Le
  KHJ34010.1 239 TPPRLAKRSINFNVMEKQYGDDPPVPFSYLNKTVSvENQLLCYSTYTNESSHNVIRANLEKSI-HIRETVK--GPRYCPSLESKIIRFSDREKHIIWLE 334
                 **********************************76***************************.6666766..************************** PP

                 ESSTT--EEEEET----S-HHHHHHHHTTSTT-TT--EEE--EEEEEEEE-GGGB-TTSBBSSSBTEEE-CGGGTB-SHHHHHHHHHHHHHHHHHHHCT CS
        GIDA 292 pegleteliylvgfstslpeevqkevlrsipGLenaeivrpGyaieydyvdprqllntLetkkvkgLflAGqinGteGYeEaaaqGllAGinaarkakg 390
                 peg ++e iy++g+s + p+e q++vl++i+GLen+++++pGy +eydyvdpr+l+ +Letk ++gL+lAGqinGt+GYeEaaaqG++AG+na + +++
  KHJ34010.1 335 PEGFNSEVIYPNGISMTVPIEAQDKVLKTIKGLENVTMLQPGYGVEYDYVDPRNLKCNLETKLIEGLYLAGQINGTTGYEEAAAQGIIAGVNAGLASQS 433
                 *********************************************************************************************999886 PP

                 S CS
        GIDA 391 k 391
                 +
  KHJ34010.1 434 R 434
                 5 PP

>> GIDA_assoc  GidA associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  229.0   0.0   3.4e-71   6.8e-68       1     209 [.     437     647 ..     437     648 .. 0.98

  Alignments for each domain:
  == domain 1  score: 229.0 bits;  conditional E-value: 3.4e-71
                 ----TTT-HHHHHHHHHHHH--SS-B-CCCB--TTTCCC-CCCHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHH...HHH CS
  GIDA_assoc   1 lilkRseaYiGVLiDDLvtkgvkEPYRmfTSRaEyRlllRaDnAdlRLtekgrelGlvseeryekfeekkeeieelkellkstklkseewkkl..lekk 97 
                 ++l+R ++YiG++iDDL+tkgv+EPYRmfTSR+EyR++ RaDnAdlRLt+kgre+G+v +er++kf+++ +eie+l++ lk+   +s  w ++  +++ 
  KHJ34010.1 437 FTLSRVDGYIGIMIDDLITKGVSEPYRMFTSRCEYRMSSRADNADLRLTKKGREVGIVGDERWNKFSDEATEIENLTSVLKAKVASSPVWINAglNVSV 535
                 789******************************************************************************9999999999888999** PP

                 T....EHHHHCTTST--HHHHHCCHHHHHHHSCHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHTSB--TTS-CCCSTT--CHHHHHHHHH--SCHHHHT CS
  GIDA_assoc  98 eskklslaellkrpevkledlleelpeeeeeseeeleqveieakYegyiekqeeeieklkkeenlkipedldYskikgLskearekLkkvrPetlgqAs 196
                 +s+k+s++e+l+ + vk ++++ ++pe  ++s++ +++v+ie  Y++yi++q+ ei++++k+e+lk+p+dldY+++ gLs  ++ +L+ +rPe+lgqA+
  KHJ34010.1 536 DSSKRSAFEILRVTGVKPHHIACMVPEILNYSPHIQNRVAIESIYAPYIAQQAVEIKNFQKDESLKLPTDLDYHSVFGLSLHEKAQLDLTRPESLGQAK 634
                 *********************9999999*********************************************************************** PP

                 TSTTS-HHHHHHH CS
  GIDA_assoc 197 risGvtpaaisvL 209
                 ri+G+tpa i  L
  KHJ34010.1 635 RIEGLTPAGILRL 647
                 ********99877 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.1   3.1e-09   6.3e-06       1     129 [.      41     182 ..      41     193 .. 0.66

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 3.1e-09
  FAD_oxidored   1 DvvVvGGgpaGvaAAiaAaraGakvlLveergvlGGlltsglvatdig..nkaee.qvvtgiareflerlrqrgga..rlkkrskw...ntfepeva 89 
                   +vvV+GGg aG  A   Aar+Ga+++L+ ++    G  +       ig  + ++e  +  g+a++++++   + +   r+k ++ w   +  + e +
    KHJ34010.1  41 EVVVIGGGHAGSEACAGAARSGARTALITPKLDNIGVCSCNPSFGGIGkgTLIREiDALDGLAGRIIDKAGVQFKVlnRKKGPAVWgprAQIDRELY 137
                   59**************************9764433444433322222211233335677777777777775533333233344444434379***** PP

  FAD_oxidored  90 kavleeml.aeagvtvllntrlvevekeg....kriesvtveske 129
                   k+ + e l + ++++++l+++ + ++ e+    kri++v++es+e
    KHJ34010.1 138 KKYMREELeTYQNLQIVLGSVEDIIVSEEedgkKRIRGVRLESNE 182
                   ****99996568999999987644444322345679999998765 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.2   2.6e-08   5.2e-05       2     108 ..      41     194 ..      40     207 .. 0.64

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 2.6e-08
                  SEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHH.......................................... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......................................... RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcllskallgvaedaeias.......................................... 57 
                  +vvviGgG+AG +a   +a++ga+++l+   +    g c+  + + g+++ + i++                                          
   KHJ34010.1  41 EVVVIGGGHAGSEACAGAARSGARTALIT-PKLDNIGVCSCNPSFGGIGKGTLIREidaldglagriidkagvqfkvlnrkkgpavwgpraqidrely 137
                  79**************************6.33333344777777777777766666777888889777777777777777777777777766666443 PP

                  .....HHHHCHHHHCCCCHCCTCEEEEESC.EEEEETEEEC..........TCEEEEEESEEEE--- CS
                  .....xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx..........xxxxxxxxxxxxxxxx RF
  Pyr_redox_2  58 .....evvkklnqgielllgeevvkidpgk.kkvklekkke..........gdeekiaydklvlAtG 108
                       e+       +e++ +   ++i  g+ +++ ++++++          +++e i  +++vl tG
   KHJ34010.1 138 kkymrEE-------LETYQN---LQIVLGSvEDIIVSEEEDgkkrirgvrlESNEVILTNHVVLTTG 194
                  3333222.......333333...33333333333333333344444455556667777777777777 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   2.1   1.7e-05     0.034       2      29 ..      42      69 ..      41      88 .. 0.86
   2 ?   -0.9   0.0      0.33   6.6e+02     164     202 ..     158     196 ..     117     210 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.7e-05
                   EEEE--SHHHHHHHHHHHHTTT-EEEEE CS
  FAD_binding_2  2 viViGsGlAGLaAAleaaeaGlkvavve 29
                   v+ViG+G AG  A + aa+ G+++a+++
     KHJ34010.1 42 VVVIGGGHAGSEACAGAARSGARTALIT 69
                   9************************997 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.33
                    EEEEEE...CTT..EEEEEEEEETTTTCEEEEEESEEEE----- CS
  FAD_binding_2 164 adeLiv...edg..rvtGavvenpesgrevrirakavvlatgGf 202
                    ++++iv   edg  r++G+ +e  +++    i  ++vvl+tg f
     KHJ34010.1 158 VEDIIVseeEDGkkRIRGVRLE--SNEV---ILTNHVVLTTGTF 196
                    6677773323448899999999..4444...5568999999998 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.9   1.3         9   1.8e+04       1      13 [.      43      55 ..      43      62 .. 0.79
   2 ?   13.8   0.0   2.1e-05     0.043      85     155 ..     126     195 ..     115     196 .. 0.80

  Alignments for each domain:
  == domain 1  score: -4.9 bits;  conditional E-value: 9
  NAD_binding_9  1 aivGaGprGlavl 13
                   +++G+G +G  ++
     KHJ34010.1 43 VVIGGGHAGSEAC 55
                   69****9998766 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 2.1e-05
  NAD_binding_9  85 ldpddfvpRalyGrYlrdlfeellarlpegvtvevhraevvdleeradgq..avlladgaslaadaVvLAlGh 155
                    + p++ + R ly +Y+r+ +e+ + +l  ++ +  +++ +v+ ee+++++   v+l++++ +  ++VvL++G 
     KHJ34010.1 126 WGPRAQIDRELYKKYMREELETYQ-NL--QIVLGSVEDIIVSEEEDGKKRirGVRLESNEVILTNHVVLTTGT 195
                    5688999***************98.44..356666777777766666664447*******************7 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   1.0      0.16   3.3e+02       2      26 ..      42      68 ..      41      79 .. 0.78
   2 ?   10.9   0.0   0.00012      0.25     133     207 ..     123     201 ..      88     235 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.16
                EEEECTSHHHHHHHHHHHHTT..EEEE CS
         DAO  2 vviiGGGiiGlstAyeLarrg..Vtll 26
                vv+iGGG +G+ +   +ar g  ++l+
  KHJ34010.1 42 VVVIGGGHAGSEACAGAARSGarTALI 68
                9*********97776666766666665 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00012
                 EEEEETTEEEEEHHHHHHHHHHHHHHTT.-EEEESECEEEE...EEEE..TCEEEEEEECT.EEEEEEEEEEE--GGGHH.HH CS
         DAO 133 galfypdtgqvdpakltaalaraaealG.veilegtevtgl...eeed..gkvwgverttp.gendaadavVnaaGawsd.ll 207
                  a++ p  +q+d + + +++++++e+    +i++g  v+++   eeed  +++ gv r ++ + + + ++vV+++G + + ++
  KHJ34010.1 123 PAVWGPR-AQIDRELYKKYMREELETYQnLQIVLG-SVEDIivsEEEDgkKRIRGV-RLESnEVILT-NHVVLTTGTFLGgEI 201
                 4688899.9***************999868*****.9***8675444578888888.4444344345.88******9966544 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1     6e-05      0.12      30      56 ..      41      67 ..      34      75 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 6e-05
                 EEEEESTSHHHHHHHHHHHHTT-EEEE CS
  AlaDh_PNT_C 30 kvlviGgGvaGlqAiatakglgakVtv 56
                 +v+viGgG aG +A a a++ ga++ +
   KHJ34010.1 41 EVVVIGGGHAGSEACAGAARSGARTAL 67
                 69*********************9876 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.6   0.00042      0.83       2      29 ..      41      68 ..      40      76 .. 0.91
   2 ?    0.5   0.0     0.097   1.9e+02     359     391 ..     378     411 ..     375     425 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00042
                 SEEEE--SHHHHHHHHHHHHTT--EEEE CS
  HI0933_like  2 dviviGgGaAGlmaAisaakrgkrVlll 29
                 +v+viGgG AG  a++ aa+ g+r++l+
   KHJ34010.1 41 EVVVIGGGHAGSEACAGAARSGARTALI 68
                 79**********************9998 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.097
                  EE-GGGB-TTT....-BBTTSTTEEE-GGGBSEEE-T CS
  HI0933_like 359 GVdlkevsskt....meskkvpgLffaGEvlDvegvt 391
                  GV+ + v+++     +e+k ++gL++aG +   +g t
   KHJ34010.1 378 GVEYDYVDPRNlkcnLETKLIEGLYLAGQI---NGTT 411
                  6666666665411116899*********75...4444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (669 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 4568.42
//
Query:       KHJ34011.1  [L=168]
Description: hypothetical protein EV44_g6397 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-53  180.1   0.0    2.2e-53  179.9   0.0    1.0  1  DMRL_synthase  6,7-dimethyl-8-ribityllumazine synthase


Domain annotation for each model (and alignments):
>> DMRL_synthase  6,7-dimethyl-8-ribityllumazine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.9   0.0   1.2e-57   2.2e-53       2     136 ..      26     162 ..      25     165 .. 0.96

  Alignments for each domain:
  == domain 1  score: 179.9 bits;  conditional E-value: 1.2e-57
                    EEEEEEEESTTHHHHHHHHHHHHHHHHHCTTSSCCEEEEEESSCCCHHHHHHHHCTSTT-.SEEEEEEEEE--SSCHHHHHHHHHHHHHHHHHHHC CS
  DMRL_synthase   2 lriaiVvarfneeitdkllegaldelkeagvaeenidvvtVPGafElplaakklaesskyldavialGvvirGetphfeyvaeavskglmrvsldt 97 
                    lriaiV+ar+n+ i+ +l++ga+++l + gv e+nid+ +VPG++Elp+a++k+++s    da+ia+Gv+i+Get+hfey+a++vs+glm+v+l++
     KHJ34011.1  26 LRIAIVHARWNTPIIGALVAGAKSSLLATGVYEQNIDIHSVPGSWELPIACSKICSSYPFPDALIAIGVLIKGETMHFEYIANSVSQGLMKVQLEK 121
                    8*******************************************************65448*********************************** PP

                    TS-EEEEEEEESSHHCCHHCCTSTC..CCHHHHHHHHHHHH CS
  DMRL_synthase  98 gvPvifgvltvdteeqaleraggka..gnkGeeaaeaalem 136
                    +vP+ifg+ltv ++eqa+ rag k+  +n+Ge+++++a+e+
     KHJ34011.1 122 NVPIIFGLLTVLNQEQAEIRAGLKNggHNHGEDWGKTAVEL 162
                    **********************88889************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1199.93
//
Query:       KHJ34012.1  [L=868]
Description: hypothetical protein EV44_g5185 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (868 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1123  (0.062636); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.70u 0.27s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 5822.86
//
Query:       KHJ34013.1  [L=523]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1165  (0.0649785); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 3792.60
//
Query:       KHJ34014.1  [L=374]
Description: hypothetical protein EV44_g0448 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.1e-09   35.9   1.1      2e-08   34.2   0.1    2.5  2  DnaJ      DnaJ domain


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.1   1.1e-12     2e-08       1      37 [.      44      79 ..      44     125 .. 0.88
   2 ?   -3.0   0.1      0.47   8.5e+03      28      33 ..     289     294 ..     287     301 .. 0.72

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 1.1e-12
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdp 37
                ++Y++Lg +++as+d+I kaYrk ++ +HPDk ++ +
  KHJ34014.1 44 TFYDFLGTKSSASQDDISKAYRKRSRILHPDKVKQ-Q 79
                58*****************************9833.3 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.47
                 HSTTTS CS
        DnaJ  28 yHPDkn 33 
                 +HPD+ 
  KHJ34014.1 289 LHPDEL 294
                 7***64 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1074  (0.059903); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2875.12
//
Query:       KHJ34015.1  [L=321]
Description: putative prenylated rab acceptor 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       711  (0.0396564); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.20s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 2628.79
//
Query:       KHJ34016.1  [L=372]
Description: putative fungal zn binuclear cluster domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-08   32.8   9.5    1.1e-07   31.8   9.5    1.5  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   9.5   6.1e-12   1.1e-07       2      38 ..      43      81 ..      42      83 .. 0.87

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 6.1e-12
                S-HHHHHCT---ST...SSSS-HHHHHCTHHHCCCCTCCC CS
     Zn_clus  2 aCdnCrkkKvKCda...kkPaCsnCkklnleCtfysessk 38
                aC +Cr++K++C a   ++  CsnC++l +eC fy+  ++
  KHJ34016.1 43 ACGHCRRRKIRCIAspgDRR-CSNCIRLKKECNFYPVDQQ 81
                9*************765554.**************98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       659  (0.0367561); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 2553.00
//
Query:       KHJ34017.1  [L=223]
Description: putative dnaj domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.7e-19   67.8   0.5    1.3e-18   66.8   0.5    1.5  1  DnaJ             DnaJ domain
  ------ inclusion threshold ------
        0.3   11.2   3.8       0.65   10.2   3.8    1.5  1  Bacteriocin_IIc  Bacteriocin class II with double-glycine lea


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.8   0.5   1.5e-22   1.3e-18       1      63 []       8      74 ..       8      74 .. 0.88

  Alignments for each domain:
  == domain 1  score: 66.8 bits;  conditional E-value: 1.5e-22
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHH..HHHH..HHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdp..eaee..kFkeineAyevLsdpekRkqYD 63
                dyY+ Lgv+++a++++I+ aY++ alk HPD+ p d+  +a++  kF+ +n+Ay +Lsdp +R +YD
  KHJ34017.1  8 DYYAALGVASTATQQQIRDAYKRAALKTHPDRLPPDSpeRAKQtlKFQIVNDAYYTLSDPGRRTDYD 74
                8******************************88444435333355*********************9 PP

>> Bacteriocin_IIc  Bacteriocin class II with double-glycine leader peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   3.8   7.3e-05      0.65      30      60 ..     154     184 ..     141     185 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 7.3e-05
  Bacteriocin_IIc  30 ggalaGaatGaatlgilgaavGavvGavvGa 60 
                       g+ +Gaa+G+++++  g ++Ga++G   Ga
       KHJ34017.1 154 IGGFSGAAMGFIVANFPGLIAGAAAGNRLGA 184
                      46789*******9999999999999977777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.18s 00:00:00.61 Elapsed: 00:00:00.35
# Mc/sec: 1915.32
//
Query:       KHJ34018.1  [L=456]
Description: putative extracellular lipase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-28   98.4   0.0      2e-27   95.8   0.0    2.1  1  Lipase_3       Lipase (class 3)
    4.3e-05   23.7   0.0    7.7e-05   22.9   0.0    1.3  1  Thioesterase   Thioesterase domain
    0.00086   18.6   0.0     0.0023   17.2   0.0    1.7  2  Hydrolase_4    Serine aminopeptidase, S33
     0.0044   16.7   0.0     0.0077   15.9   0.0    1.4  1  Abhydrolase_1  alpha/beta hydrolase fold
  ------ inclusion threshold ------
       0.03   14.9   0.0      0.046   14.3   0.0    1.3  1  Abhydrolase_6  Alpha/beta hydrolase family
       0.11   12.2   0.0        0.2   11.3   0.0    1.3  1  PGAP1          PGAP1-like protein


Domain annotation for each model (and alignments):
>> Lipase_3  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.8   0.0   6.8e-31     2e-27       2     140 ..     141     340 ..     140     342 .. 0.94

  Alignments for each domain:
  == domain 1  score: 95.8 bits;  conditional E-value: 6.8e-31
                 EEE----------------EEE-HHHH-G..................................................TT-EEEHHHHHHHHS-HHHH CS
    Lipase_3   2 vafRGtesakdwltdldfslteakellek..................................................eggkvhsgfleayeeslreq 50 
                 v+fRGt+s++d + dl ++++++++ +++                                                  ++++vh gf+++y+  +r  
  KHJ34018.1 141 VVFRGTHSITDAILDLLMMPQKFTPYPSDlqneymnsqsnfilqplhdiiewpvqrfirwifrqsqttksqgkhytpkcKNCTVHLGFWKSYK-MIRHL 238
                 89***********************9888999*************************************************************.***** PP

                 HHHHHHHHHHHTT-EEEEEEEETHHHHHHHHHHHHHHHTT-SS---EEEEEES----B-HHHHHHHH................T-TTE...EEEEEEET CS
    Lipase_3  51 vlkelkrllekypeysivvtGHSLGgalAlLaaldlvengenekkkvtvvtfGqPrvgnkefaklvd................sqlnk...kvlrvvnt 130
                 vl+++++l +++pey++ ++GHSLGga+A+L+al+l + g      ++v tfG+Pr+gn+ ++++vd                    +   ++ rv++ 
  KHJ34018.1 239 VLPNIQKLRQEFPEYQLNLVGHSLGGAVATLLALELESLG----YSPKVTTFGEPRIGNYGLKDYVDtvfnlrsgdsnsqtnfP---SsksRYRRVTHF 330
                 ****************************************....78*********************99999999888664441...256689****** PP

                 T--GGG-S-S CS
    Lipase_3 131 nDivPrlppl 140
                  D+ P lp+ 
  KHJ34018.1 331 SDPFPLLPME 340
                 *****99986 PP

>> Thioesterase  Thioesterase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   2.6e-08   7.7e-05      49      95 ..     236     282 ..     230     285 .. 0.89

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 2.6e-08
                   HHHHHHHHHHHHHH-SSSSEEEEEETHHHHHHHHHHHHHHHCT-SEE CS
  Thioesterase  49 eelaaeyaealrqiqpegPyalfGhSlGgllAfevArqLesqGlavk 95 
                     l+   ++ lrq+ pe  ++l+GhSlGg++A  +A +Les G  +k
    KHJ34018.1 236 RHLVLPNIQKLRQEFPEYQLNLVGHSLGGAVATLLALELESLGYSPK 282
                   5666677999*******************************997765 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       1.7   5.2e+03     148     176 ..      45      73 ..      24      77 .. 0.67
   2 !   17.2   0.0   7.7e-07    0.0023      66      96 ..     243     273 ..     223     281 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.7
  Hydrolase_4 148 lsrdpevvaayeadplvhgkitvrlllel 176
                    r ++  +++++d l+  +it +l+ el
   KHJ34018.1  45 TARSQQLEESLQSDALWNSNITHDLFDEL 73 
                  45556666677777777777777777666 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 7.7e-07
  Hydrolase_4  66 vekvkeehpelplfllGhSmGGliallyllr 96 
                  ++k+++e pe +l l+GhS+GG++a+l++l+
   KHJ34018.1 243 IQKLRQEFPEYQLNLVGHSLGGAVATLLALE 273
                  799***********************99975 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   2.6e-06    0.0077      63      93 ..     243     273 ..     175     277 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 2.6e-06
                    HHHHHHHCTTSSEEEEEETHHHHHHHHHHHH CS
  Abhydrolase_1  63 ldrildalgddkltlvGhSmGGmialayaae 93 
                    ++++++ ++  +l+lvGhS+GG++a+ +a+e
     KHJ34018.1 243 IQKLRQEFPEYQLNLVGHSLGGAVATLLALE 273
                    3467999*********************987 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.5e-05     0.046      66      95 ..     254     289 ..     229     409 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.5e-05
                    SEEEEEETCHHHHHHHHHHCC...........EEEEES- CS
  Abhydrolase_6  66 pvvlvGHSlGGalalaaapla.........lvvgvlldp 95 
                    +  lvGHSlGGa+a++   la         + v+ + +p
     KHJ34018.1 254 QLNLVGHSLGGAVATL---LAleleslgysPKVTTFGEP 289
                    5579************...66544555555334444444 PP

>> PGAP1  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   6.7e-05       0.2      79     108 ..     243     270 ..     231     282 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.7e-05
       PGAP1  79 IlslysssekeptsviliGHSmGGivaraa 108
                 I++l   +e ++ ++ l+GHS+GG va ++
  KHJ34018.1 243 IQKLR--QEFPEYQLNLVGHSLGGAVATLL 270
                 55554..677888999***********664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       688  (0.0383736); expected 358.6 (0.02)
Passed bias filter:                      609  (0.0339673); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3111.13
//
Query:       KHJ34019.1  [L=127]
Description: hypothetical protein EV44_g3237 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.011   16.0   0.5      0.064   13.5   0.1    2.0  2  Retrotrans_gag  Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0     0.027   4.8e+02      39      68 ..       6      35 ..       1      53 [. 0.60
   2 ?   13.5   0.1   3.6e-06     0.064      10      63 ..      73     126 ..      56     127 .] 0.75

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.027
  Retrotrans_gag 39 tflpserkdqleeelsslrQ..gtesvreYvt 68
                    +  ps++++++++  s++++  g+  v +Y++
      KHJ34019.1  6 NQIPSRHQNETHA--SQITKfsGKTNVVQYIE 35
                    4445444444443..44444434555666655 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 3.6e-06
  Retrotrans_gag  10 aAkswlkslvarsidasesWkdlkkaflktflpserkdqleeelsslrQgtesv 63 
                     a k+w++  v+ ++   ++W+ + ++++ ++++++ ++++ ee ++l Q+ ++v
      KHJ34019.1  73 APKEWARLEVRLNPHLKDNWTAFPDRLRLRYQNTALRQKKVEERQNLIQKGNTV 126
                     233444444444444499*******************************66665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       667  (0.0372023); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 925.73
//
Query:       KHJ34020.1  [L=1132]
Description: putative vwa-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.6e-27   93.8   0.3    1.7e-26   92.9   0.3    1.5  1  PH_10         Pleckstrin homology domain
    3.9e-14   53.3   0.0    7.2e-14   52.4   0.0    1.4  1  VWA           von Willebrand factor type A domain
    1.2e-10   41.5   0.2    5.1e-10   39.5   0.1    2.2  2  VWA_3         von Willebrand factor type A domain
    0.00032   21.0   5.7    0.00058   20.1   5.7    1.5  1  zf-RING_2     Ring finger domain
     0.0035   17.3   6.3     0.0063   16.4   6.3    1.4  1  zf-RING_5     zinc-RING finger domain
     0.0078   16.1   5.5      0.015   15.2   5.5    1.5  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.044   13.4   7.6      0.011   15.3   3.9    1.9  2  Zn_ribbon_17  Zinc-ribbon, C4HC2 type
      0.046   13.6   5.1      0.086   12.7   5.1    1.5  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
      0.079   13.0   0.2       0.31   11.1   0.3    1.9  2  DUF1147       Protein of unknown function (DUF1147)
      0.092   13.1   3.6       0.21   11.9   3.6    1.6  1  zf-rbx1       RING-H2 zinc finger domain
       0.11   12.2   3.1       0.26   11.1   3.1    1.7  1  zf-RING_11    RING-like zinc finger
        1.4    9.0   5.4        3.3    7.8   5.4    1.7  1  zf-C3H2C3     Zinc-finger
        1.5    9.2   5.5        2.9    8.3   5.5    1.5  1  zf-RING-like  RING-like domain
        1.7    8.5   3.4          3    7.7   3.4    1.4  1  zf-RING_4     RING/Ubox like zinc-binding domain
        3.3    7.8   5.7        9.4    6.4   5.7    1.8  1  zf-RING_UBOX  RING-type zinc-finger


Domain annotation for each model (and alignments):
>> PH_10  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.9   0.3   1.4e-29   1.7e-26       2     123 .]     412     523 ..     411     523 .. 0.94

  Alignments for each domain:
  == domain 1  score: 92.9 bits;  conditional E-value: 1.4e-29
       PH_10   2 kfGeLllhdtltVkkdsdsereyevyLFekillcvkevkeekkkksksssllkkkssssskkkktklqLKGrilis.nvtevtssskpgsyslqiswkg 99 
                 +fG+L+l+++++V+kd+ s++e+e++LF+++l+cvke     kk +     l ++++++s++k+t+++LKG+ili+ +++ev++ss+ ++++l++s++ 
  KHJ34020.1 412 RFGKLRLYGKIRVGKDKVSWQELECFLFAEMLVCVKE-----KKIN-----LPQWDDPNSTQKATRCTLKGSILIKkHLNEVSRSSHGDENVLTLSLS- 499
                 8************************************.....6666.....6788888999*************************************. PP

       PH_10 100 dke.lesftlrfkneeqlkkWesal 123
                  ++ l+ f+lrf+n + lk W++al
  KHJ34020.1 500 -VAeLPFFHLRFENINDLKVWQHAL 523
                 .555******************986 PP

>> VWA  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.4   0.0     6e-17   7.2e-14       1     169 [.     597     762 ..     597     767 .. 0.93

  Alignments for each domain:
  == domain 1  score: 52.4 bits;  conditional E-value: 6e-17
                 EEEEEEE-STTSCHHHHHHHHHHHHHHHHHHTBTTTTEEEEEEEESSS..EEEEEETTSHC..HHHHHHHHHHTGSGGGGSSC-HHHHHHHHHHHHHHH CS
         VWA   1 DivfvlDgSgsmgeenfekvkefikklveklevgpegtrvglvqfsse..vktefslndys..skeellsalnnlkysgggttntgkalkyaleklfks 95 
                 Div+v+   +sm++ +++ v++++k +v++le   e++r+g+v+f+s+  +++ + +++      +e+ls+++ + +++   + + ++ + a++ l+++
  KHJ34020.1 597 DIVVVVPITSSMQGVKINLVRDALKFIVQNLE---ERDRLGIVTFGSSsgATPLVGMTSSVwnGWAEALSSIRPVGQKNIRAD-VVEGANVAMDLLMQR 691
                 9*******************************...***********9999*********777466999999999877777777.9************** PP

                 HGTSSTTSEEEEEEEESS--CSS.HTHHHHHHHHGCTEEEEEEEESSSHHHHHHHHHSSSSCHHCEEEESSHHHH CS
         VWA  96 sagaRenakkviilltdGksndg.dpkeaaneakeqgikvfavGvgnadekelLnkiasepgeghvftvtdfeel 169
                 + +   n    i l++d   +d+  ++ ++ +a +++i ++++G g  ++ + + ++++ ++   + +v+d+  l
  KHJ34020.1 692 KFN---NPIATIFLISDSSATDQeTVDFVVSRAEAAKIGIYSFGLGMTHKPDTMVELSTRTK-ASYTYVKDWMML 762
                 ***...99**************66*********************************99999.899999999865 PP

>> VWA_3  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.5   0.1   4.3e-13   5.1e-10       2     150 ..     597     750 ..     596     754 .. 0.68
   2 ?   -3.6   0.0         8   9.6e+03      91     108 ..     816     840 ..     799     846 .. 0.62

  Alignments for each domain:
  == domain 1  score: 39.5 bits;  conditional E-value: 4.3e-13
       VWA_3   2 evvivvDvsssmsaen.klvkdaLsvalrqLptndkiavllfgt.........kprplfpgsravsaaelqealqkikelelslgasnlegaLk....e 86 
                 ++v+vv ++ssm++ + +lv+daL+++++ L+++d++ ++ fg+          +++++ g++++          +i       g+ n ++        
  KHJ34020.1 597 DIVVVVPITSSMQGVKiNLVRDALKFIVQNLEERDRLGIVTFGSssgatplvgMTSSVWNGWAEAL--------SSIRP----VGQKNIRADVVeganV 683
                 89************99****************************4433333333344444444444........33333....3333333333301003 PP

       VWA_3  87 alr...qpakpgevrsvilltDgss.aqgeervsdlisrar.ekirfhalglgsslsaamlqaLAeasg 150
                 a++   q++ +  + +++l++D+s+ +q + ++   +sra  +ki + ++glg +++++ + +L+ +++
  KHJ34020.1 684 AMDllmQRKFNNPIATIFLISDSSAtDQETVDF--VVSRAEaAKIGIYSFGLGMTHKPDTMVELSTRTK 750
                 3322224456777***********644444444..455554499********************99886 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 8
       VWA_3  91 p.......akpgevrsvilltDgss 108
                         +k+ +  ++i++ D++s
  KHJ34020.1 816 SlgdlrfgDKRDILVQLIIMPDQNS 840
                 0444455678888999999999995 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   5.7   4.9e-07   0.00058       2      44 .]     130     177 ..     129     177 .. 0.77

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 4.9e-07
   zf-RING_2   2 eCpICleel...ssadsvlllpCgHvfhreClerwlrssst..CPlCr 44 
                 eC++C e+l    ++++vl+  CgHv h+ C+ +++++ +   CP C+
  KHJ34020.1 130 ECAVCEEPLehtLRGERVLQFSCGHVSHEACFYEHIKEFEAqyCPSCN 177
                 8****99994444555577668**********8877666666*****5 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   6.3   5.3e-06    0.0063       1      43 [.     130     177 ..     130     178 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 5.3e-06
   zf-RING_5   1 hCnkCfekl...skeekfyltsCgHifCekClkkll..ekeavCpiCr 43 
                 +C +C e+l      e++   sCgH+ +e+C+ +     + ++Cp C+
  KHJ34020.1 130 ECAVCEEPLehtLRGERVLQFSCGHVSHEACFYEHIkeFEAQYCPSCN 177
                 6********665455559******************9999*******7 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   5.5   1.2e-05     0.015       1      41 []     131     176 ..     131     176 .. 0.96

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.2e-05
                 -TTT-S--SS-E......E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn.....elleCkHsfCskCirkilksrkkvkCPlC 41 
                 C++C e ++ +          C+H  +++C  +++k+ ++++CP C
  KHJ34020.1 131 CAVCEEPLEHTLrgervLQFSCGHVSHEACFYEHIKEFEAQYCPSC 176
                 **********99***9999*****************988999**** PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   3.9   9.3e-06     0.011       6      47 ..     130     175 ..     126     179 .. 0.82
   2 ?   -3.7   0.1       7.9   9.5e+03      43      49 ..     763     769 ..     757     771 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 9.3e-06
  Zn_ribbon_17   6 sCayCe....lavkgrvvlcgvCeHvlHasCarewfenddlaeCps 47 
                   +Ca+Ce     +++g  vl  +C+Hv H++C  e  ++ + + Cps
    KHJ34020.1 130 ECAVCEepleHTLRGERVLQFSCGHVSHEACFYEHIKEFEAQYCPS 175
                   79999733224678999****************9998888899997 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 7.9
  Zn_ribbon_17  43 aeCpsGC 49 
                    eC +GC
    KHJ34020.1 763 RECLAGC 769
                   5899999 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   5.1   7.2e-05     0.086       1      40 []     130     176 ..     130     176 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 7.2e-05
  zf-C3HC4_2   1 kCpiCldmlkdpsvvt.....pCgHvfCqkCilrsLeekn..eCPlC 40 
                 +C++C + l+ +++        CgHv ++ C+ + ++e +   CP C
  KHJ34020.1 130 ECAVCEEPLEHTLRGErvlqfSCGHVSHEACFYEHIKEFEaqYCPSC 176
                 6*********987544444569************988765569***9 PP

>> DUF1147  Protein of unknown function (DUF1147)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3   0.00026      0.31      22      57 ..     736     772 ..     730     774 .. 0.87
   2 ?   -2.2   0.0       3.8   4.6e+03      20      36 ..     802     818 ..     797     830 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00026
     DUF1147  22 trkPhtGnhletsG.GmvtmvkkwlllmtfmaGcrGm 57 
                 t kP t   l t      t vk w++l   +aGc G 
  KHJ34020.1 736 THKPDTMVELSTRTkASYTYVKDWMMLRECLAGCLGA 772
                 899999999999752578****************985 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3.8
     DUF1147  20 lqtrkPhtGnhletsGG 36 
                 lqt k  tG   e+s G
  KHJ34020.1 802 LQTIKRATGKDAEASLG 818
                 8********99999977 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   3.6   0.00018      0.21      12      55 .]     129     177 ..     124     177 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00018
     zf-rbx1  12 eacieckapgdee...cpvvlGeCgHaFHlhCiskWlkt..rkvCPlcr 55 
                 ++c  c++p +++     v + +CgH+ H  C  + +k+   + CP c+
  KHJ34020.1 129 SECAVCEEPLEHTlrgERVLQFSCGHVSHEACFYEHIKEfeAQYCPSCN 177
                 56777777777766664566669****************98999****7 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.1   0.00022      0.26       1      28 [.     130     160 ..     130     161 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00022
  zf-RING_11   1 eCsICLeefk...pgqalfilpCsHtFHfkC 28 
                 eC++C e+++   +g+++   +C+H+ H  C
  KHJ34020.1 130 ECAVCEEPLEhtlRGERVLQFSCGHVSHEAC 160
                 9****9999987789999999********** PP

>> zf-C3H2C3  Zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   5.4    0.0028       3.3       1      35 []     131     177 ..     131     177 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0028
   zf-C3H2C3   1 CdnCglkLdyp.....fvaysCkHlvHakCa.......deevCPkCk 35 
                 C  C+ +L+       + ++sC H+ H  C        +++ CP C+
  KHJ34020.1 131 CAVCEEPLEHTlrgerVLQFSCGHVSHEACFyehikefEAQYCPSCN 177
                 8888888887633344789***********61233333345699997 PP

>> zf-RING-like  RING-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   5.5    0.0024       2.9       1      43 []     131     176 ..     131     176 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0024
  zf-RING-like   1 CeaCke...ivtqGvrCsnesCnvrlHvdCfqhyirthsskkCpkC 43 
                   C++C+e     ++G r  + sC    H+ Cf ++i++ + + Cp+C
    KHJ34020.1 131 CAVCEEpleHTLRGERVLQFSCGHVSHEACFYEHIKEFEAQYCPSC 176
                   666665111456677777889**************999******** PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   3.4    0.0025         3       1      45 [.     131     178 ..     131     180 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0025
   zf-RING_4   1 cplCdeel..detdkdlkpCeCgyqiClfC.yhrileeeegrCPaCre 45 
                 c +C e+l    +++++   +Cg+     C y++i+e e++ CP C  
  KHJ34020.1 131 CAVCEEPLehTLRGERVLQFSCGHVSHEACfYEHIKEFEAQYCPSCNA 178
                 888999995556799999999*99999999457899999*******76 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   5.7    0.0079       9.4       1      34 [.     131     169 ..     131     176 .. 0.69

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0079
  zf-RING_UBOX   1 CpIClelftdP.....lvl.pCGHtFCreClwelsksleg 34 
                   C +C e++++      ++  +CGH+ ++ C  +++ ++  
    KHJ34020.1 131 CAVCEEPLEHTlrgerVLQfSCGHVSHEACF-YEHIKEFE 169
                   *********554455445457*********9.44444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.78u 0.28s 00:00:01.06 Elapsed: 00:00:00.48
# Mc/sec: 7081.97
//
Query:       KHJ34021.1  [L=1098]
Description: putative aarp2cn domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-90  304.0   0.2    1.1e-90  304.0   0.2    2.7  2  RIBIOP_C        40S ribosome biogenesis protein Tsr1 and BMS1
    1.2e-29  102.3   0.0    3.9e-29  100.6   0.0    2.0  1  AARP2CN         AARP2CN (NUC121) domain
      8e-05   23.1   0.0    0.00023   21.6   0.0    1.7  1  AAA_16          AAA ATPase domain
    8.8e-05   22.8   0.0    0.00027   21.2   0.0    1.8  1  AAA_22          AAA domain
    0.00016   21.8   0.0    0.00075   19.7   0.0    2.2  1  AAA_33          AAA domain
    0.00019   21.0   0.1       0.15   11.6   0.0    3.0  3  GTP_EFTU        Elongation factor Tu GTP binding domain
    0.00022   21.3   0.0    0.00067   19.7   0.0    1.9  1  MMR_HSR1        50S ribosome-binding GTPase
    0.00023   21.1   0.0    0.00045   20.2   0.0    1.5  1  NACHT           NACHT domain
    0.00098   19.6   0.0     0.0024   18.3   0.0    1.7  1  AAA             ATPase family associated with various cellula
     0.0012   19.3   0.0     0.0012   19.3   0.0    3.0  1  ABC_tran        ABC transporter
     0.0014   18.7   0.8      0.029   14.4   0.0    2.8  2  AAA_14          AAA domain
     0.0032   17.8   0.0     0.0077   16.6   0.0    1.6  1  AAA_19          AAA domain
     0.0037   17.2   1.8       0.12   12.3   0.0    2.7  2  Rad17           Rad17 P-loop domain
     0.0048   16.6   0.1      0.029   14.1   0.1    2.0  1  PduV-EutP       Ethanolamine utilisation - propanediol utilis
     0.0071   16.7   0.0      0.022   15.1   0.0    1.9  1  RNA_helicase    RNA helicase
     0.0085   16.0   0.0       0.08   12.8   0.0    2.6  3  RsgA_GTPase     RsgA GTPase
  ------ inclusion threshold ------
      0.011   15.4   0.0      0.035   13.7   0.0    1.8  2  cobW            CobW/HypB/UreG, nucleotide-binding domain
      0.013   15.2   0.0      0.031   14.0   0.0    1.5  1  AAA_30          AAA domain
      0.014   14.6   0.0       0.03   13.5   0.0    1.5  1  NB-ARC          NB-ARC domain
      0.014   15.4   0.1       0.22   11.5   0.0    2.4  2  AAA_5           AAA domain (dynein-related subfamily)
      0.022   15.0   2.4       0.05   13.9   0.0    2.5  2  AAA_28          AAA domain
      0.023   14.6   0.0       0.06   13.3   0.0    1.6  1  Ploopntkinase3  P-loop Nucleotide Kinase3
      0.027   15.0   0.1      0.027   15.0   0.1    3.6  2  AAA_18          AAA domain
      0.031   14.5   0.0      0.095   12.9   0.0    1.8  1  Roc             Ras of Complex, Roc, domain of DAPkinase
      0.042   13.7   0.2       0.32   10.9   0.1    2.4  2  MobB            Molybdopterin guanine dinucleotide synthesis 
      0.054   13.4   0.1       0.11   12.5   0.1    1.4  1  NTPase_1        NTPase
      0.069   12.7   0.0       0.15   11.5   0.0    1.5  1  AAA_7           P-loop containing dynein motor region
       0.14   12.4   0.1       0.41   10.9   0.1    1.8  1  Gly_acyl_tr_C   Aralkyl acyl-CoA:amino acid N-acyltransferase
       0.24   11.9   0.1       0.24   11.9   0.1    4.0  3  AAA_17          AAA domain


Domain annotation for each model (and alignments):
>> RIBIOP_C  40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.9       4.2   2.6e+03      56     106 ..     550     603 ..     496     606 .. 0.49
   2 !  304.0   0.2   1.8e-93   1.1e-90       6     292 .]     626     932 ..     621     932 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 4.2
    RIBIOP_C  56 ealeeregvegGtyvrleik..nvpeelveek.nfdekkplivfgllphEekvs 106
                 e+ + ++++e   +v   ++  +++++   e+  ++ ++ ++ ++llp E+k+s
  KHJ34021.1 550 EKSKIENEIEENDRVMSLFNyeELEKKWTLEEnVENLRRRFTNSELLPKEDKIS 603
                 333334445555554444421122221111112345566677777777777765 PP

  == domain 2  score: 304.0 bits;  conditional E-value: 1.8e-93
    RIBIOP_C   6 dvearerfakyrglkslrtsew.....dpken....lpeeyarifefenfketkkrvlkeale............eregveg...Gtyvrleiknvpee 80 
                 d e++++++++++lk  ++ e      +  e+    + +  +r f +++++e++k+ ++++l+            +r +veg   G+y +++i++v +e
  KHJ34021.1 626 DAERETNARRKEELKLRFEIEDreglnN--EKaqalKDNADNREFGEDEWYEAQKANIQKQLNinkaelealddnQRLNVEGfpaGKYAKITIDGVSSE 722
                 5666777777777777766555333222..22567778889999***************99888899999999995555555666************** PP

    RIBIOP_C  81 lveeknfdekkplivfgllphEekvsvvnvrikrhreyekpikskdplifsvGfRrfqakPifsqedtknnkhklerylkpght.cvatfygpitfpnt 178
                 +v+  +f++k p+i++gl ++E+++++v+vrikrhr+++k++k++dplifs+G+Rrfq++Pi+s++d ++ ++++++y+ p+ht c+atfygp++ pnt
  KHJ34021.1 723 FVT--KFNPKMPIIAGGLNATEDRFGFVEVRIKRHRWHKKILKTNDPLIFSMGWRRFQTIPIYSTSD-SRVRKRMLKYT-PEHThCFATFYGPLISPNT 817
                 ***..89************************************************************.6**********.99999************** PP

    RIBIOP_C 179 pvlafkelsskeasfrlvatGsvlevdpsriivkrivLtGhpfkihkktaviryMFfnpedvawFkpveLrTksGrrGhIkeslgt.hGyfkatFddkl 276
                 ++ ++++l skea+fr++atG+vl+v++ ++ivk+++LtG+p+ki+k+ta+i++MF+++ ++a+++++ +rT+sG rG+Ik++l++ +G+f+atF+dk+
  KHJ34021.1 818 GFSCVRSLPSKEAGFRVAATGTVLNVEEGTEIVKKLKLTGTPYKIFKNTAFIKDMFTTSVEIAKYEGALIRTVSGVRGQIKKALSKpEGHFRATFEDKI 916
                 ********9*****************************************************************************9************ PP

    RIBIOP_C 277 kqsDiVlmslYkrvfp 292
                  +sDiV+++++ +v+p
  KHJ34021.1 917 LMSDIVFLRTWCPVKP 932
                 *************987 PP

>> AARP2CN  AARP2CN (NUC121) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.6   0.0   6.3e-32   3.9e-29       1      86 []     214     301 ..     214     301 .. 0.98

  Alignments for each domain:
  == domain 1  score: 100.6 bits;  conditional E-value: 6.3e-32
     AARP2CN   1 Eilnllrfisvqkf.rplswReqrpyiladrveiltdseskeeeskedrtlsveGyvrGspl.sanqlvHipglGDfqiekieklpdP 86 
                 Ei+n++rfisv+k  rpl wR+++py l+d+++++t+++++e+++k+drt+++ Gy+rG+++  +nq++HipglGDf +++ie lpdP
  KHJ34021.1 214 EIHNISRFISVMKNpRPLIWRNSHPYSLIDSFRDITHPTKIESNPKCDRTVVLCGYLRGTNFaPENQRIHIPGLGDFSVSRIETLPDP 301
                 8***********98799*********************************************888**********************9 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   3.7e-07   0.00023      24      63 ..      63     110 ..      53     132 .. 0.75

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 3.7e-07
      AAA_16  24 p.elvllsGesGvGKsslvrellralekd......g.giflrgkcdql 63 
                 p +lv ++G++GvGK++l+++l +++ k+      g + +++ k ++l
  KHJ34021.1  63 PpRLVAIVGPPGVGKTTLLKSLIKRYAKEtlsepqGpITVITSKRQRL 110
                 259******************999999986777765344466665555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   4.3e-07   0.00027       6      49 ..      65     117 ..      63     137 .. 0.80

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 4.3e-07
      AAA_22   6 gilvvtGesGtGKTtllrrlleqldeeakaee.........erpevvfvtlps 49 
                 ++++++G++G+GKTtll+ l +++ +e   e          +r ++ ++++p 
  KHJ34021.1  65 RLVAIVGPPGVGKTTLLKSLIKRYAKETLSEPqgpitvitsKRQRLTLIECPT 117
                 5789********************88777777777777776666666777765 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   1.2e-06   0.00075       1      38 [.      66     103 ..      66     185 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 1.2e-06
      AAA_33   1 lvllvGlpGsGKstlaerllkklgavllssdtlrrrlf 38 
                 lv +vG+pG+GK+tl+++l+k+ + ++ls+++   ++ 
  KHJ34021.1  66 LVAIVGPPGVGKTTLLKSLIKRYAKETLSEPQGPITVI 103
                 7899************************9998443443 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.016       9.9       4      28 ..      65      89 ..      63      98 .. 0.85
   2 !   11.6   0.0   0.00025      0.15      85     150 ..     120     189 ..      98     227 .. 0.82
   3 ?   -3.1   0.2       7.4   4.6e+03      23      51 ..     427     456 ..     385     478 .. 0.59

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.016
                EEEEEEESTTSSHHHHHHHHHHHTT CS
    GTP_EFTU  4 rnigiighvDhGKtTLtdrLlyktg 28
                r ++i+g    GKtTL+ +L+++  
  KHJ34021.1 65 RLVAIVGPPGVGKTTLLKSLIKRYA 89
                6799****************98755 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00025
                 HHHHHHHHT-SEEEEEEETTTBSTHHHHHHHHHHHHTTTE..EEEEEESCGST..HHHHHHHHHHHHHHH CS
    GTP_EFTU  85 kevirglrvlDgavlvvdaveGvepqteevlrlalkegvp..iivfiNKmDrl..kaelkeiveevkqkl 150
                 + +    +v+D+ +l++d + G e+ t e l+++ + g+p  ++ +++ +D     ++lk +++++k+++
  KHJ34021.1 120 EAMMDISKVADIILLMIDGKFGFEMETMEFLNILAASGMPgnVFGILTHLDLFqkPQTLKDTKKKLKNRF 189
                 56777789********************************989999*******87789999999999999 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 7.4
                 HHHHTTSSCHHHHHH.HHHSTHCHSHHHHH CS
    GTP_EFTU  23 Llyktgaiskkgeka.eeervlDtlkeEre 51 
                 ++y++ + s++++ + ++++ +D+ ++E +
  KHJ34021.1 427 IMYASLDESSDQSADkDTDESIDQSADESA 456
                 333333333333333133455555555555 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   1.1e-06   0.00067       2      84 ..      67     137 ..      66     166 .. 0.67

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 1.1e-06
                 EEEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHC.TSEEEEEEE CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflalee.adlillvvd 84 
                 vaivG p vGK+tL+++l+++ + ++ ++p+  +++++     k+++++l+ +p  +e          a+ ++ + ad+ill++d
  KHJ34021.1  67 VAIVGPPGVGKTTLLKSLIKRyAKETLSEPQGPITVITS----KRQRLTLIECPTQLE----------AMMDISKvADIILLMID 137
                 89******************9544555555544444444....245788888888333..........33333443577777777 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   7.2e-07   0.00045       1      32 [.      65      96 ..      65     138 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 7.2e-07
                SCEEEEC-TTTCHHHHHHHHHHHHCTS-SCCC CS
       NACHT  1 rlvilqGeaGsGKTtLlqklalawaegklpqg 32
                rlv++ G++G+GKTtLl++l+   a+++l + 
  KHJ34021.1 65 RLVAIVGPPGVGKTTLLKSLIKRYAKETLSEP 96
                789***********************999874 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.0     4e-06    0.0024       2      62 ..      68     134 ..      67     138 .. 0.62

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 4e-06
                 EEESSTTSSHHHHHHHHHHHH........T..HEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEE CS
         AAA   2 llyGppGtGKTllakavakel........g..vefleisgsellskyvgesekkirelfkeakekakpsil 62 
                  ++GppG+GKT+l k+++k          +  +++++ +  +l+   + e + +++++++  k       l
  KHJ34021.1  68 AIVGPPGVGKTTLLKSLIKRYaketlsepQgpITVITSKRQRLT---LIECPTQLEAMMDISKVAD-IILL 134
                 589****************9633333322133445666666665...7777777777776544443.3444 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0     2e-06    0.0012      12      37 ..      65      90 ..      62     159 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 2e-06
                SEEEEEESTTSSHHHHHHHHTTSS-- CS
                xxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 12 ekvaivGenGaGKStLlkllagllkp 37
                ++vaivG+ G GK+tLlk l++ + +
  KHJ34021.1 65 RLVAIVGPPGVGKTTLLKSLIKRYAK 90
                579******************99976 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   4.7e-05     0.029       3      43 ..      65     110 ..      64     137 .. 0.70
   2 ?    1.1   0.4      0.63   3.9e+02      22      56 ..     417     448 ..     414     466 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 4.7e-05
      AAA_14   3 kilvitGaRrvGKTtllkqlikell.....vkkesilyinldderd 43 
                 ++++i+G+  vGKTtllk lik++       ++  i  i+ +++r+
  KHJ34021.1  65 RLVAIVGPPGVGKTTLLKSLIKRYAketlsEPQGPITVITSKRQRL 110
                 5789*****************9988666655555555555555555 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.63
      AAA_14  22 likellvkkesilyinldderdkkladpeklleli 56 
                 +++e++  +++i+y +ld+ +d+++++    +e i
  KHJ34021.1 417 FADEEI-IENNIMYASLDESSDQSADKD--TDESI 448
                 455555.6799********999765533..23333 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.2e-05    0.0077      11      50 ..      65     105 ..      59     172 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.2e-05
      AAA_19  11 kvllvtaGpGtGKTrvlkhivallvelggvkp.eeillvaf 50 
                 ++++++++pG GKT++lk  ++ + +++  +p  +i++++ 
  KHJ34021.1  65 RLVAIVGPPGVGKTTLLKSLIKRYAKETLSEPqGPITVITS 105
                 7899******************9988776655245555554 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   0.00019      0.12      44      72 ..      63      91 ..      31     119 .. 0.82
   2 ?    3.4   0.0       0.1        64       5      33 ..     669     697 ..     665     710 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00019
       Rad17 44 kkriLLisGPsGCgkstvvkvLskelgik 72
                + r++ i GP+G gk+t +k L k ++ +
  KHJ34021.1 63 PPRLVAIVGPPGVGKTTLLKSLIKRYAKE 91
                457999****************9988754 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.1
       Rad17   5 enelWfekykPekaeelavhkkkieevke 33 
                 + ++W+e  k + +++l + k  +e++++
  KHJ34021.1 669 GEDEWYEAQKANIQKQLNINKAELEALDD 697
                 5689*******************999864 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.1   4.6e-05     0.029       4     117 ..      67     187 ..      65     196 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 4.6e-05
   PduV-EutP   4 illiGkvgsGKttLtqalkg....eelkYkktqaiefsdeviDtPGeylenrklysalivtsaeadvialvqdateeesvfppgfasv.....fnkevi 93 
                 + ++G+ g+GKttL ++l +    e+l+  +   + ++++        +e  +  +a++ +s  ad+i l+ d +   ++ + +f ++     +  +v 
  KHJ34021.1  67 VAIVGPPGVGKTTLLKSLIKryakETLSEPQGPITVITSKR--QRLTLIECPTQLEAMMDISKVADIILLMIDGKFGFEMETMEFLNIlaasgMPGNVF 163
                 56899999999999999876333233433333322222222..1224678888899*****************876666655555555111116679** PP

   PduV-EutP  94 GiitkidlaedeenieaveelLks 117
                 Gi+t++dl ++ + ++ ++++Lk+
  KHJ34021.1 164 GILTHLDLFQKPQTLKDTKKKLKN 187
                 *********************997 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   3.6e-05     0.022       2      36 ..      68     102 ..      67     126 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3.6e-05
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkklklkkkdsvys 36 
                    ++Gp+g+GK+tl k+L+k+ +k+  ++ ++ + +
    KHJ34021.1  68 AIVGPPGVGKTTLLKSLIKRYAKETLSEPQGPITV 102
                   689*******************9986666666655 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   0.00013      0.08      92     126 ..      57      91 ..      42      99 .. 0.81
   2 ?   -3.1   0.0        10   6.2e+03      52      75 ..     399     423 ..     398     442 .. 0.59
   3 ?   -2.2   0.0       5.5   3.4e+03      42      63 ..     676     697 ..     673     718 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00013
                  HHHHHCTTSEEEEECSTTSSHHHHHHHHCTT---- CS
  RsgA_GTPase  92 elkellkdktsvlvGqSGvGKStLinallpelelk 126
                  +l ++   +++++vG+ GvGK+tL+++l+ +   +
   KHJ34021.1  57 RLPDEPPPRLVAIVGPPGVGKTTLLKSLIKRYAKE 91 
                  555555668999****************9876554 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 10
                  EEE-GGG--HHH.HHHHHHHHHHHT CS
  RsgA_GTPase  52 vlnKiDlleeee.eleelkeeleal 75 
                  v+nK+D++++e+   ++  ++ e +
   KHJ34021.1 399 VINKTDIYKSERdPRRKAFADEEII 423
                  79*****999885233333333333 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 5.5
                  HHHTT-EEEEEEE-GGG--HHH CS
  RsgA_GTPase  42 aeekgiepvivlnKiDlleeee 63 
                  a++++i+  + +nK++l   ++
   KHJ34021.1 676 AQKANIQKQLNINKAELEALDD 697
                  788999*********9976655 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   5.7e-05     0.035       3      27 ..      67      91 ..      65      96 .. 0.85
   2 ?   -2.8   0.0       6.6   4.1e+03     146     158 ..     399     411 ..     387     420 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 5.7e-05
                EEEEESTTCCHHHHHHHHHCT--SS CS
        cobW  3 tvltGflGsGKTtLlnhllenragl 27
                + ++G++G GKTtLl++l+++ a++
  KHJ34021.1 67 VAIVGPPGVGKTTLLKSLIKRYAKE 91
                679****************876655 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 6.6
                 EEE-HHHHCHC.. CS
        cobW 146 vlnKtDlldeeal 158
                 v+nKtD  ++e++
  KHJ34021.1 399 VINKTDIYKSERD 411
                 89****9998865 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   4.9e-05     0.031      19      45 ..      65      91 ..      62     111 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.9e-05
      AAA_30 19 rvavltGpAGtGKttalkalreaweaa 45
                r+++++Gp+G GKtt+lk+l + ++++
  KHJ34021.1 65 RLVAIVGPPGVGKTTLLKSLIKRYAKE 91
                5899***************98877766 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   4.8e-05      0.03      17      44 ..      63      88 ..      51     109 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 4.8e-05
                TSCSEEEEEEESTTSSHHHHHHHHCCSH CS
      NB-ARC 17 elqslvvalvGmgGvGKttlakqilnks 44
                 +   +va+vG +GvGKttl+k+ ++ +
  KHJ34021.1 63 PP--RLVAIVGPPGVGKTTLLKSLIKRY 88
                34..49****************988864 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00035      0.22       3      26 ..      68      91 ..      67     101 .. 0.84
   2 ?    0.7   0.0      0.78   4.8e+02      64      93 ..    1004    1040 ..     965    1064 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00035
                EEE--SSSSHHHHHHHGGGGBS-- CS
       AAA_5  3 lLvGppGtgKselaerlaaalnre 26
                 +vGppG+gK++l ++l +++ +e
  KHJ34021.1 68 AIVGPPGVGKTTLLKSLIKRYAKE 91
                589**************9998554 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.78
                  -.......G-SEEEEESGGG--HHHHHHHHHHHHSSE CS
       AAA_5   64 r.......egeilvlDEveraesevlnsLlslleerr 93  
                  +       +++ +vl++ e+a ++ +++L++l +++ 
  KHJ34021.1 1004 KqkdktymQKRAVVLGGEEKAARDLMQKLMTLRNDKI 1040
                  133444446788999999***********99876654 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   8.1e-05      0.05       2      27 ..      67      93 ..      66     125 .. 0.80
   2 ?   -0.9   0.9       2.8   1.7e+03      30      70 ..    1024    1065 ..    1013    1085 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.1e-05
      AAA_28  2 ivitGgestGKTtlleaLaar.gypvv 27
                ++i+G+++ GKTtll+ L +r   +++
  KHJ34021.1 67 VAIVGPPGVGKTTLLKSLIKRyAKETL 93
                89***************9877433344 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 2.8
      AAA_28   30 aareileeklakgedalpwv.edllafaervleeqleeeaaa 70  
                  aar+++++++  ++d++++  + + a +e++ ++q+++++++
  KHJ34021.1 1024 AARDLMQKLMTLRNDKIDKRrKSKEANREAFRKKQAKNAEKR 1065
                  677777777777777777655555555555555555444433 PP

>> Ploopntkinase3  P-loop Nucleotide Kinase3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   9.7e-05      0.06       3      34 ..      64      95 ..      63     110 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 9.7e-05
  Ploopntkinase3  3 arliylvGqPGaGkstlmaeltkgfdrskveq 34
                    +rl+ +vG PG Gk+tl+ +l k + ++++++
      KHJ34021.1 64 PRLVAIVGPPGVGKTTLLKSLIKRYAKETLSE 95
                    69************************999874 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.1   4.3e-05     0.027       1      21 [.      67      87 ..      67     112 .. 0.85
   2 ?    0.2   0.2       1.6     1e+03      27      84 ..     658     721 ..     628     731 .. 0.52

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 4.3e-05
      AAA_18  1 IlltGtpGvGKttlakeLskr 21
                +++ G+pGvGKttl k L kr
  KHJ34021.1 67 VAIVGPPGVGKTTLLKSLIKR 87
                689**************9766 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 1.6
      AAA_18  27 nlrdvakenglllevdpe....aldeskrldedkldklldaleenss..aleegknlvidghla 84 
                  l+d+a +++  ++++ e     +++++ +++  l++l d+ + n +    ++   + idg+ +
  KHJ34021.1 658 ALKDNADNREFGEDEWYEaqkaNIQKQLNINKAELEALDDNQRLNVEgfPAGKYAKITIDGVSS 721
                 4455555555544444442222133333333333333333333322244345555555555555 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   0.00015     0.095       2      28 ..      67      93 ..      66     123 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00015
                EEEESSTTSSHHHHHHCHCT-CCC-EE CS
         Roc  2 vvlvGdsgvGKtsllkrfvedkfseke 28
                v +vG  gvGKt+llk+++++  +e+ 
  KHJ34021.1 67 VAIVGPPGVGKTTLLKSLIKRYAKETL 93
                679*********999988876665543 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00052      0.32       2      27 ..      67      92 ..      66      95 .. 0.88
   2 ?   -0.8   0.0       2.1   1.3e+03      85     109 ..     692     716 ..     670     731 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00052
        MobB  2 lgivgksgsGKTtLleklipelkarg 27
                ++ivg  g GKTtLl+ li+  +++ 
  KHJ34021.1 67 VAIVGPPGVGKTTLLKSLIKRYAKET 92
                789****************9988765 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 2.1
        MobB  85 larlsevDlvlvEGfkkealpkiev 109
                 l+ l++   + vEGf + +++ki +
  KHJ34021.1 692 LEALDDNQRLNVEGFPAGKYAKITI 716
                 455555666779***********87 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   0.00017      0.11       2      25 ..      67      90 ..      66     107 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00017
                EEEE--TTSSHHHHHHHHHHHH.. CS
    NTPase_1  2 vfiTGppGvGKtTlvkkvlellks 25
                v+i GppGvGKtTl+k +++  ++
  KHJ34021.1 67 VAIVGPPGVGKTTLLKSLIKRYAK 90
                6899************99987655 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00025      0.15      36      82 ..      67     113 ..      64     120 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00025
       AAA_7  36 vllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdii 82 
                 v +vGp G+GKt+++k+l+k++ ke+++  +  ++  ts +q  ++i
  KHJ34021.1  67 VAIVGPPGVGKTTLLKSLIKRYAKETLSEPQGPITVITSKRQRLTLI 113
                 779********************999887777777777766665555 PP

>> Gly_acyl_tr_C  Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00066      0.41       9      55 ..     941     987 ..     936    1013 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00066
  Gly_acyl_tr_C   9 tpvsWslmdqtgelrmagtlpkYrrqglvahvivkqakalekkgiPv 55 
                     ++ W+ m  tge+rma  l+  ++++ v++ i + ++ ++ +++P 
     KHJ34021.1 941 NLIGWTGMRLTGEVRMAEGLKVPQQENSVYRPIKRVTRNFNPLKVPQ 987
                    5789*****************99999999999999999988888885 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   0.00038      0.24       1      21 [.      70      90 ..      70      98 .. 0.87
   2 ?   -0.3   0.2       2.2   1.3e+03      47      71 ..     458     482 ..     428     547 .. 0.76
   3 ?    3.2   0.1      0.18   1.1e+02      45     104 ..     675     731 ..     641     745 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00038
                EE-TTSSHHHHHHHHHHHHTE CS
      AAA_17  1 lGgPGsGKgtqceklvekygf 21
                +G+PG+GK+t+++ l ++y  
  KHJ34021.1 70 VGPPGVGKTTLLKSLIKRYAK 90
                7***************99965 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 2.2
                 CTSHHHHHHHHHHHHHHHHHHHHHS CS
      AAA_17  47 rklpleekkelqkeaaekiaeeakk 71 
                 ++ +++ ++ +++ a ++i+ee+++
  KHJ34021.1 458 KDTDESTDESVDQSADDNIEEEDSD 482
                 2567778888889999999888643 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.18
                 HHCTSHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-SEEEETTEEEESSHHHHHHHH..SE CS
      AAA_17  45 emrklpleekkelqkeaaekiaeeakkkgvlvdghprikeqagfldglpkevleelkpda 104
                 e +k++++++  + k      +  ++++ + v+g+p  k  +  +dg+ +e++++++p++
  KHJ34021.1 675 EAQKANIQKQLNINKAEL---EALDDNQRLNVEGFPAGKYAKITIDGVSSEFVTKFNPKM 731
                 333344333333333333...333467899********999999************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1098 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1717  (0.0957666); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                       100  (0.00557756); expected 17.9 (0.001)
Passed Fwd filter:                        37  (0.0020637); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              29  [number of targets reported over threshold]
# CPU time: 1.03u 0.30s 00:00:01.33 Elapsed: 00:00:00.51
# Mc/sec: 6483.20
//
Query:       KHJ34022.1  [L=246]
Description: putative glutamine amidotransferase class-i [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-08   33.0   0.0    5.8e-08   32.7   0.0    1.1  1  GATase    Glutamine amidotransferase class-I
  ------ inclusion threshold ------
        0.1   12.2   0.0       0.14   11.7   0.0    1.2  1  GATase_3  CobB/CobQ-like glutamine amidotransferase domain


Domain annotation for each model (and alignments):
>> GATase  Glutamine amidotransferase class-I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   0.0   6.5e-12   5.8e-08      43     175 ..      65     199 ..      28     207 .. 0.77

  Alignments for each domain:
  == domain 1  score: 32.7 bits;  conditional E-value: 6.5e-12
                 TSEEEEEEESSCTT.....TTTHHHHHHHHCT.STS-EEEETHHHHHHHHHTTT..EEEEEECEEEEEEEEEEEETTT.CGGTTTTSEEEEEEEEEEEE CS
      GATase  43 pdgilvsgGpgspg.....vegkieaikeare.nkiPiLGICLGmQllaiefgr..kvvkekekehhggtmrlgddet.allyglknevierhrHryev 132
                 +d+il+ g   +       +++ ++ ++ +++ +++ +LG+C+G+Q++a ++ +  +v + + ++   g  +++ +e+ +++  + +++   + Hr+ev
  KHJ34022.1  65 FDAILLTGSRYNAFdddiwIKQLVSYVQTILSeRRVRVLGVCFGHQIVARALEGqnSVGRSR-FGWEVGVTNVELTERgRKVFRT-SRLALHQMHRDEV 161
                 56666655544433455566666777777665599*****************9864454544.7777777777776666666666.799999******* PP

                 ESGCHHHTTEEEEEEEETTEEEEEEEEETTTEEEESSBTTSTT CS
      GATase 133 npkelepaglevtakseddeelmeiiekknpfvgvQFHPEsts 175
                       ++ +e ++ ++  + + ++   ++ ++ +Q HPE+  
  KHJ34022.1 162 LV---ASRHVELLGSTAA-CANQGMYDYRR-LFTIQAHPEYNE 199
                 98...8999999999955.68999999887.9********975 PP

>> GATase_3  CobB/CobQ-like glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.6e-05      0.14      39      99 ..      63     123 ..      45     163 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.6e-05
    GATase_3  39 edadlvilpGgkdtiqdlallresgldeaike.aaeaggpvlgiCGGlqmLGeeiedpegve 99 
                 ++ d+++l G++  ++d  +  ++ l   +++ ++e+ ++vlg+C G q+  + +e ++ v 
  KHJ34022.1  63 DEFDAILLTGSRYNAFDDDIWIKQ-LVSYVQTiLSERRVRVLGVCFGHQIVARALEGQNSVG 123
                 569********8777766655553.33444431457889***************99988773 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       381  (0.0212505); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1741.46
//
Query:       KHJ34023.1  [L=557]
Description: putative 50s ribosomal protein l36e [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (557 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 4113.01
//
Query:       KHJ34024.1  [L=349]
Description: putative aldose 1-epimerase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      1e-51  176.1   0.0    1.3e-51  175.7   0.0    1.1  1  Aldose_epim  Aldose 1-epimerase


Domain annotation for each model (and alignments):
>> Aldose_epim  Aldose 1-epimerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.7   0.0   7.2e-56   1.3e-51      14     301 .]       8     344 ..       6     344 .. 0.91

  Alignments for each domain:
  == domain 1  score: 175.7 bits;  conditional E-value: 7.2e-56
                  EECTCTTEEEEEEETT.STEESB-B-STHHHHHHSC..CSSCEECSS-SEEETTEE.EETTEEEECCCCBTTTCEETBSGGG...SB-EEEEEEE... CS
  Aldose_epim  14 kislyGAtllslkvpdkeqrevllgsddaeeylkds..yfgatlgrvanRianGeF.eldGkpyqlpqneegknplHGgarg...reWeveevke... 102
                  ++  +GA + s+ v +   ++++ g+++  +y++ +  +fg t+grv nR+a+++  +l+ k y l++n+ g n+lHGg+ g   ++W+ ++      
   KHJ34024.1   8 EFLPLGAIIKSFHVGK---TNIVQGFSSQINYETYNspHFGETIGRVTNRVAKAKInSLNQKSYDLSKND-GDNSLHGGFEGwgkKIWDGPTLIGkrd 101
                  67889**********9...8********99****999*****************97579***********.*****************9887655566 PP

                  ..........TTEEEEEEEEEEETCHCSTSEEEEEEEEE...EETTEE....EEEEEEEE....ESS..S-EEEEEEEEEEEETSSC.TCTGGEEEEE CS
  Aldose_epim 103 ..........ddgvtvslvlkpdgeegypgdlevrvtyt...Lnedne....lkieyeat....ndg..kptpfnltnHtYFnlsge.sidshelqie 176
                            dd v+++l++ +dg+egypg +e++v yt   L e+++    l+ieye+     n++  k+t++n+tnH+YFn+sg  +i++++++++
   KHJ34024.1 102 isalpplydsDDCVVFKLRS-NDGDEGYPGCIEAQVFYTngkLYENEKeinvLSIEYEVIfpedNTSeiKQTVVNMTNHSYFNISGGsTIEGTKVTLT 198
                  9999****999999999999.*****************86668777778999******9633333337****************************** PP

                  EEEEEEECTTSGEEEEEEECTTCCCCC.....CSSEEHCSSETEEEEEEEESSC.............SEEEEEETTTTEEEEEEEETTSSEEEEEECT CS
  Aldose_epim 177 adeylevdeeliptgelkdvkgtpfdf.....rqpkaigedlkglDhayllksk.............lkaviidpdkksgiklevsttepalvvytgn 256
                  ++ +l+vd+++ip       +  +  f     ++p ++g + + +Dh++  +++             lk+ + + +++++i+lev++tepa+++ytg 
   KHJ34024.1 199 SNMHLPVDNSGIPNS----TTPVS--FsgiiaNEPFTLGATEPNFDHCFIVNPEpripftldsrsspLKLLVAAFHPQTKIHLEVYSTEPAFQFYTGQ 290
                  *************33....33333..32345699999999988******************************************************* PP

                  TTT........SEECCEEESSECTCETCCCECHHHT.-EEEHTTTEEEEEEEEE CS
  Aldose_epim 257 flk........kylsreglaletqmlpdepnhpefp.sivlkpGesysaetsys 301
                  + +            r+g+++e+++++d++n++e++ ++vl+ G++y ++++y+
   KHJ34024.1 291 YIDvpavdnspARGPRSGFCVEPSRYIDAVNREEWRdQVVLQRGQVYGSRIVYK 344
                  ***********899************************************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (349 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2501.02
//
Query:       KHJ34025.1  [L=346]
Description: hypothetical protein EV44_g3064 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.041   14.7   0.1       0.11   13.2   0.1    1.7  1  DUF3744   ATP-binding cassette cobalt transporter


Domain annotation for each model (and alignments):
>> DUF3744  ATP-binding cassette cobalt transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.1   6.3e-06      0.11      17      55 ..      76     114 ..      74     119 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 6.3e-06
     DUF3744  17 aLKkagidltslnqlsnleklalsqdkeklkewfekqka 55 
                  LK+ +i++t+ +q+sn++k++lsq  + lk+ ++ q+a
  KHJ34025.1  76 SLKDNNITVTQRQQISNIKKIDLSQPLNLLKTHYTAQRA 114
                 59***********************88888888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.27s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2561.01
//
Query:       KHJ34026.1  [L=120]
Description: putative duf786 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-26   92.5   6.9    2.2e-26   92.3   6.9    1.1  1  Rab5ip    Rab5-interacting protein (Rab5ip)


Domain annotation for each model (and alignments):
>> Rab5ip  Rab5-interacting protein (Rab5ip)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.3   6.9   1.2e-30   2.2e-26       2      82 .]      24     115 ..      23     115 .. 0.90

  Alignments for each domain:
  == domain 1  score: 92.3 bits;  conditional E-value: 1.2e-30
      Rab5ip   2 lsnlrsltalllGvvaGilgLeslsGflfylllsllvsllfyalkvkgks..kk..........yfrgalkelwteglvnglagFvLtWtlfY 82 
                 l+ l+++ta+l+Gv+aG lgLes+ Gf+fy+l+sl++s l+y+++v++++  kk          yfr+  +elw++gl++gl++++LtWtlfY
  KHJ34026.1  24 LTALHNITASLFGVGAGTLGLESYFGFIFYILFSLFTSTLIYIFRVRPSNvtKKyqlkeigtttYFRS-SRELWIDGLIDGLSSYILTWTLFY 115
                 7889*******************************************88866115555566777****.79*********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 860.32
//
Query:       KHJ34027.1  [L=403]
Description: putative transporter sec9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        9.6    6.7  11.1       0.64   10.5   3.0    2.8  2  Usp       Universal stress protein family


Domain annotation for each model (and alignments):
>> Usp  Universal stress protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   1.2     0.096   1.7e+03      57      71 ..     172     197 ..     150     235 .. 0.53
   2 ?   10.5   3.0   3.6e-05      0.64      13      89 ..     236     313 ..     231     384 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.096
                 HHHHHHHHHHHHHH...........H CS
         Usp  57 eeleleeaeleada...........a 71 
                 ee+e+ee ++ +++           +
  KHJ34027.1 172 EEEEEEEIAATKQEirlmkqedvssT 197
                 22222222222222222223333331 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 3.6e-05
                 HHHH.HHHHHHHHHHHHCTSEEEEEEEEESSHCCCCCCCHHHHHHHHHHHHHHHHHHHH.HHHHHHCTTCEEEEEEEES CS
         Usp  13 eesk.kAlewAlelakargaelillhvidprasgavsdadeeaeeeeleleeaeleada.akaaaeaggvkvevvveeg 89 
                  +s  kA e+A e +k+ +   +++hv+ p++++++ +a++e+ +  +++e++++ea+  a+   + + +  + ++e+g
  KHJ34027.1 236 ANSNrKAEEKAKE-LKTLNRSMFAVHVSNPFTNSSRRAARDEEIQTKHQQEREQREATRqAAFNSRNRLEGSMREIEDG 313
                 5666355555555.57778889*********************************998765555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1806  (0.100731); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 2801.77
//
Query:       KHJ34028.1  [L=195]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       946  (0.0527637); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1468.57
//
Query:       KHJ34029.1  [L=477]
Description: hypothetical protein EV44_g3422 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0017   18.2   0.0     0.0039   17.0   0.0    1.6  1  gag_pre-integrs  GAG-pre-integrase domain
  ------ inclusion threshold ------
      0.018   14.6   0.1        0.7    9.4   0.1    2.2  1  DUF31            Putative peptidase (DUF31)
      0.026   14.0   0.0      0.038   13.4   0.0    1.3  1  Asp              Eukaryotic aspartyl protease
      0.046   13.7   0.0        6.5    6.7   0.0    2.3  2  Lipoprot_C       Lipoprotein GNA1870 C terminal like


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   8.6e-07    0.0039      22      66 ..     220     267 ..     196     268 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 8.6e-07
  gag_pre-integrs  22 ssinlWHrRLGHpsfsrlkkLfkkgllpglkiskse.....vCeaCqlgK 66 
                       s ++W + LGHp+ +++++L +  +++g+++++ e      +e C l+K
       KHJ34029.1 220 VSPKVWRKILGHPGIKAIESLPN--NVDGCDFDSTEkvstvDYEPCLLSK 267
                      56789*****************6..699999977555556699***9999 PP

>> DUF31  Putative peptidase (DUF31)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   0.00016       0.7      61     248 ..     158     365 ..     157     431 .. 0.54

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00016
       DUF31  61 TNlHVaaalrnandkesrftynkkd................................................................alkgktksfs 95 
                 TN+HV+++ ++++  +sr++++k+                                                                    ++t+++s
  KHJ34029.1 158 TNIHVINNTVVQKIISSREASSKDRvylgndilqadavvkaevrlklgysalssssprktlivspkvwrkilghpgikaieslpnnvdgCDFDSTEKVS 256
                 777777777777777777766544466666666666666666666666666666666666666666666666666666444443333332223333333 PP

       DUF31  96 lgkldqdnplkqtlntnnedknttklvtisks..........navktvyaAtdflktskspkdyldp.........................tqkekyk 159
                 +  ++     k+++  ++ ++++ +++ i+++           +++t+  +  +l + + +++  ++                         ++k++ k
  KHJ34029.1 257 TVDYEPCLLSKTKAIVSRRSEKNWEVSIINEEihmvvvswdiVEFSTALDGSKYLSHFYYDNEAYHHikfinirysrhpylcasipsfqvddSDKSNRK 355
                 333333333333333333333333333333334444444444344444444444444333333222245555555555555555555555555555555 PP

       DUF31 160 kieeyaDFAVleidfekskeetetsneddeelaknitndayaaldnklkqikfislksllkeakykkldekldtdkqkttleeakklyi 248
                 + ++ +DF                                                                                i
  KHJ34029.1 356 QFQNGKDF-------------------------------------------------------------------------------NI 365
                 55555555...............................................................................44 PP

>> Asp  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   8.5e-06     0.038     189     231 ..     140     182 ..     130     312 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 8.5e-06
                 TTEEEEEEEEEEEEEETTCSSEEEEHHHHHHHHHHHTTEEEET CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp 189 ggktvlcssgcqailDtGTsllalptsivekiakaigakkses 231
                  g+ ++cs   ++ilD+GT++ ++++++v+ki++  +a+++  
  KHJ34029.1 140 PGSVSSCSLYDKVILDSGTNIHVINNTVVQKIISSREASSKDR 182
                 56777899999**********************9999988765 PP

>> Lipoprot_C  Lipoprotein GNA1870 C terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0    0.0014       6.5      83     116 ..       9      42 ..       1      52 [. 0.87
   2 ?    4.6   0.0    0.0067        30     121     152 ..     105     137 ..      68     138 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0014
                 --SSGGGS-EEEEEEEEE-TTSBEEEEEEEEETT CS
  Lipoprot_C  83 hlkspelnvelaaaelkadekrhavilgdvlynq 116
                 +lks   n + a a +kad+k    +l +++y++
  KHJ34029.1   9 KLKSHFENFKPAVASIKADQKAEFELLKSTRYGK 42 
                 6999999*************************97 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0067
                 EEEEEEESTTT.-EEEEEEEEEETTEEEEEEEE CS
  Lipoprot_C 121 syrlalfgdka.qevagsaevkivekvreigla 152
                   rl+l+ +k  ++vags++v   ++v++ig a
  KHJ34029.1 105 EIRLSLIKKKGpKNVAGSSDVNNIDEVENIGAA 137
                 46788887775379****************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (477 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3290.45
//
Query:       KHJ34030.1  [L=127]
Description: putative 60s ribosomal protein l35 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.9e-17   61.4   0.6    5.9e-17   61.4   0.6    1.9  2  Ribosomal_L29  Ribosomal L29 protein


Domain annotation for each model (and alignments):
>> Ribosomal_L29  Ribosomal L29 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.4   0.6   3.3e-21   5.9e-17       3      57 .]      11      66 ..      10      66 .. 0.96
   2 ?   -0.3   0.1      0.06   1.1e+03      36      46 ..      86      96 ..      70     111 .. 0.82

  Alignments for each domain:
  == domain 1  score: 61.4 bits;  conditional E-value: 3.3e-21
                   HHHS-HHHHHHHHHHHHHHHHHHHHHHHHT.SSS-CHHHHHHHHHHHHHHHHHHHH CS
  Ribosomal_L29  3 lrelsdeeLkeklkelkkeLfnLrfqkatg.qlenpsrirkvRkdIARikTvlrer 57
                   l ++++++L ++l elk+eL +Lr qk +g + +++ +i  +Rk+IAR++T+++ +
     KHJ34030.1 11 LWAKNKADLTKQLGELKTELGQLRTQKIAGgSASKLTKIHDIRKSIARVLTIINSK 66
                   789***************************999********************976 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.06
                   -CHHHHHHHHH CS
  Ribosomal_L29 36 npsrirkvRkd 46
                    p++ r++R++
     KHJ34030.1 86 RPKQTRAIRRR 96
                   67888888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       979  (0.0546043); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 913.22
//
Query:       KHJ34031.1  [L=320]
Description: putative mitochondrial atpase complex subunit atp10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.6e-80  268.3   0.0    7.8e-80  267.8   0.0    1.1  1  ATP-synt_10  ATP10 protein


Domain annotation for each model (and alignments):
>> ATP-synt_10  ATP10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  267.8   0.0   4.4e-84   7.8e-80      11     257 .]      69     312 ..      60     312 .. 0.96

  Alignments for each domain:
  == domain 1  score: 267.8 bits;  conditional E-value: 4.4e-84
  ATP-synt_10  11 eekvkeltrpiGldkppsknent.skkyslgnslkdlfdeektekrrkeLeeelkksyfydlkefrktnGKlFlspksyfkadkalyfPnlvGktLa. 106
                  e  +k+l+rpiGl+kpp+++ent  + ++++++++dl+d++k+  rr++L+ +l+++yf+++k++r  +GK Fl+p ++f++dkalyfPn+ G+tL+ 
   KHJ34031.1  69 EYIPKPLDRPIGLSKPPNPGENTgIDVRTWKERRDDLVDYDKHLIRRRQLTSKLATPYFREWKNMRFSKGKSFLAPSRLFRSDKALYFPNFFGQTLHl 166
                  5669********************************************************************************************** PP

  ATP-synt_10 107 sskeqsledvlkgkvsvVrlfssvvgeelvksyfknkeegkdylkdyeelkeenkdlQivdinlienwlKallvklslaslrkklpkerhnkyfivsr 204
                  ++k ++++ +l+ k+s+++++ss++ge++++s+++ +  +    + +e l+++++ +Q v+in++en++Kall++++++ lrkk+ ke++ kyf+v +
   KHJ34031.1 167 DKKMRDTTPILRHKISILSVYSSAWGEKQAASFVSIE--E--HPELHELLNSKKEIVQSVNINFEENAIKALLIRMFMRGLRKKMGKENWGKYFLV-Q 259
                  ***********************************33..2..3378999***********************************************.6 PP

  ATP-synt_10 205 kqlpfeireelkinNlytGYvylvDqnlkIRWagsGnateeelellwkcvkgL 257
                   +l+ eire ++++N+++GY yl+D++++IRWagsG ++e+e + l+k+vk+L
   KHJ34031.1 260 RGLTIEIREMIGLLNSKVGYTYLLDNQCRIRWAGSGFSEENERKSLLKGVKKL 312
                  6799***********************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       523  (0.0291706); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.20s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 2688.68
//
Query:       KHJ34032.1  [L=979]
Description: putative dna mismatch repair protein msh5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-46  158.3   0.0    4.5e-46  157.2   0.0    1.5  1  MutS_V    MutS domain V
    1.7e-19   70.8   0.0    4.1e-19   69.6   0.0    1.7  1  MutS_III  MutS domain III


Domain annotation for each model (and alignments):
>> MutS_V  MutS domain V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.2   0.0   5.1e-50   4.5e-46       1     183 [.     717     909 ..     717     912 .. 0.91

  Alignments for each domain:
  == domain 1  score: 157.2 bits;  conditional E-value: 5.1e-50
                 EEEE-STTSSHHHHHHHHHHHHHHHHHT--BSSSEEEEE--SEEEEEE--------SS-HHHHHHHHHHHHHTT--TTSEEEEESTS-SS-HHHHHHHH CS
      MutS_V   1 llitGpnmaGkstylrqvalivllaqiGsfvpaekaeisivdkiftRvgasDdlakgkstFmvEmlEtasilknatekslvilDElGRGtstydGlaia 99 
                 l++tGpn +Gks+yl+q+aliv la+iGsfvpae+a+i+++dki+tR+ + +++++++s+Fm++++ +a  l+ +t++sl+i+DE G+Gt+ +dG ++ 
  KHJ34032.1 717 LIMTGPNYSGKSAYLKQNALIVYLAHIGSFVPAENATIGLTDKIMTRINSRESVSRNQSAFMIDLQQVALALTLSTHRSLIIIDEFGKGTNPTDGAGLC 815
                 599************************************************************************************************ PP

                 HHHHHHHHH..TT--EEEEEES-GGGGGHHHHSTT..EEEEEEEEE......EETTEEEEEEEEEES--SS--HHHHHHHTT--HHHHHHHHHH CS
      MutS_V 100 lavaeylle..kikaktlfatHyheltklaeklee..vknlhlavk......eeeedivflykvkegaaeksyGikvaklaglPesvverArev 183
                   v+eyll+  + + k+l atH+he+ +    +e+  ++  h++v+      ++e++i++ly+   g + +s+G   a + g+   +v+rA+e 
  KHJ34032.1 816 CGVFEYLLSlgSERPKVLAATHFHEIFENGYLCERpeLAFGHMEVRvdneseSSEDQITYLYRFLLGRSISSFGTCCALINGIDPVIVKRAEEL 909
                 *******95336899***********9977654432266556666555777667799**********************************986 PP

>> MutS_III  MutS domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.6   0.0   4.6e-23   4.1e-19       2     191 .]     309     643 ..     308     643 .. 0.80

  Alignments for each domain:
  == domain 1  score: 69.6 bits;  conditional E-value: 4.6e-23
                 HHHHTTS.SS............-TTS.....SSSS-HHHHH.---SSHHHHHHHHHHHH--BS-HHHHHHHHHHHHHT.....TT.HHHHHHHHTT--- CS
                 xxxxxxx.xx............xxxxx....xxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxx RF
    MutS_III   2 TlrnLei.le............nlrgg....skegsLlgvl.drTvTamGaRlLrewllqPltdleeInaRldaVeele...neelreelrellrrlpD 79 
                 T ++L+i l+            n   +    +++ s++g+     +T++G+  Lr+ +l+P t+l+ In+Rl+a+  +    n++   +++++l+ ++D
  KHJ34032.1 309 TFTSLQIiLRenhpnsymqgpsN---SssgaKESLSVYGLFcHLARTPQGKQKLRQVFLRPTTNLHIINERLKAIRIFLrpeNSHYLGKVHDNLKMIRD 404
                 77788885445555544444332...02333444488888744579******************************84424455556666688999999 PP

                 HHHHHHHHHTT......---HHH.................HHHHHHHHHHHHTTTTT---SSTHHHHHHH.HH...HHHHHHB-SS--SSGGGS--B-T CS
                 xxxxxxxxxxx......xxxxxx.................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx...xxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III  80 leRllsrislg......kakard.................lkallealkaleelvallekeklaeseees.la...elleeaideeplalekegedlra 151
                 +  ++ ++++g      k                      ++++l+a++++ ++ al  + k+a + +++ l+   +l+++++d  ++a+ +++ +l+ 
  KHJ34032.1 405 IRTVVLHLQKGisdisgK----GnvfrrgvwgslqnftfnVLQILDAVDEISDTDALSITVKMATEINPAiLNqvgSLITDTVDFHASAELHRTAVLQG 499
                 999997777763333331....0333334444433333334557777777666666655555544433342336669********************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
    MutS_III 152 ................................................................................................... 151
                                                                                                                    
  KHJ34032.1 500 vdteldsmkrtydgmdnlltqvanqlsihvpewaaqyienciffpqlgfltvvsldpdtgngkyegegisndiwermfvsndmgyyknhcmremdeyfg 598
                 *************************************************************************************************** PP

                 .....HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH CS
                 .....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III 152 .....iealeqelfqelleeveealerlrrlaealaeLDvllSlA 191
                      i ++e e+++el   v ++ + l ++++++ eLD+l++lA
  KHJ34032.1 599 dmygkICDREIEIVHELAVAVLKYENLLVTASDLCGELDCLVALA 643
                 *****99999**********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (979 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.44
# Mc/sec: 6659.72
//
Query:       KHJ34033.1  [L=226]
Description: putative vesicle transport v-snare protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.6e-13   48.7   0.1    6.6e-13   48.7   0.1    3.4  4  V-SNARE_C     Snare region anchored in the vesicle membrane C
  ------ inclusion threshold ------
      0.053   12.9   5.9        0.2   11.1   1.6    2.1  2  Not3          Not1 N-terminal domain, CCR4-Not complex compon
      0.069   12.8   1.8       0.12   12.1   0.2    1.9  2  PA28_beta     Proteasome activator pa28 beta subunit
      0.097   12.3   7.0       0.16   11.5   7.0    1.4  1  Snf7          Snf7
       0.12   13.0   4.9       0.38   11.3   4.9    1.9  1  Syntaxin-6_N  Syntaxin 6, N-terminal
       0.17   12.2   3.7       0.18   12.1   0.3    2.6  2  TcdB_N        TcdB toxin N-terminal helical domain
       0.18   12.2   1.7        1.7    9.1   1.7    2.5  1  SATase_N      Serine acetyltransferase, N-terminal
        0.2   11.6   7.7        2.9    7.7   2.2    2.6  3  Sec34         Sec34-like family
        6.8    7.1  10.3       0.93    9.9   2.1    2.3  2  YlqD          YlqD protein


Domain annotation for each model (and alignments):
>> V-SNARE_C  Snare region anchored in the vesicle membrane C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.2       1.1   2.2e+03      30      47 ..      10      27 ..       8      31 .. 0.82
   2 ?   -0.7   0.1      0.89   1.8e+03      28      45 ..      60      77 ..      53      83 .. 0.63
   3 ?    0.2   1.6      0.46   9.1e+02      30      52 ..      86     108 ..      84     116 .. 0.75
   4 !   48.7   0.1   3.3e-16   6.6e-13       2      65 ..     140     203 ..     139     204 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 1.1
   V-SNARE_C 30 dLhsQretLkrarsklhn 47
                +L++Q  +L++ ++kl  
  KHJ34033.1 10 QLRQQARSLETQTEKLFH 27
                799999999999999876 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.89
   V-SNARE_C 28 ledLhsQretLkrarskl 45
                +++L sQ ++L ++ ++l
  KHJ34033.1 60 RDTLISQLSRLLDSEATL 77
                445666666666665555 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.46
   V-SNARE_C  30 dLhsQretLkrarsklhnvanrl 52 
                 +L + re+L+  r+ l+++ +++
  KHJ34033.1  86 NLNRHREVLQEHRKELNTLKSQI 108
                 67777888888888887777655 PP

  == domain 4  score: 48.7 bits;  conditional E-value: 3.3e-16
   V-SNARE_C   2 rllresdrlknShrivdetisiGaailedLhsQretLkrarsklhnvanrlgksnsiLrsikrR 65 
                 + l e++r++nSh+i+d ++s+++ai e+++ Qre L ++++++ ++a +l+  n i+ +i+ +
  KHJ34033.1 140 YMLGERSRIENSHNIADSVLSQAYAINESFGFQREILASINRRITGAATQLPGLNNIIGKISAK 203
                 567799*******************************************************977 PP

>> Not3  Not1 N-terminal domain, CCR4-Not complex component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   1.1    0.0044       8.8     128     187 ..      11      72 ..       2      76 .. 0.59
   2 ?   11.1   1.6   9.9e-05       0.2     136     213 ..      54     132 ..      52     146 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0044
        Not3 128 lkdaideLneqvekleaeieklsskk.kkkkk.skekarveeleklierhkfhieklelllr 187
                 l+++ ++L++q+ekl + + + +s      k  ++ek+   ++++++e++ + i++l+ ll+
  KHJ34033.1  11 LRQQARSLETQTEKLFHTYAQYASLAnLPAKPsDEEKQTEFKINQILEKRDTLISQLSRLLD 72 
                 33444555555555555544444433322333355555788999999999999999988875 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 9.9e-05
        Not3 136 neqvekleaeieklsskkkkkkk.skeka.rveeleklierhkfhieklelllrlleneelepeevekikedieyyvesn 213
                 n+ +ek ++ i +ls+    + + ++ +a + ++l+++ e  + h ++l++l  ++++++ +++ + +++ di+ y +s 
  KHJ34033.1  54 NQILEKRDTLISQLSRLLDSEATlTA-SAlKQNNLNRHREVLQEHRKELNTLKSQIQDGRNRANLLSSVRSDIDAYYSSD 132
                 45555555556666655555555344.44599********************************************9883 PP

>> PA28_beta  Proteasome activator pa28 beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1      0.44   8.7e+02      58      84 ..       8      34 ..       2      38 .. 0.72
   2 ?   12.1   0.2     6e-05      0.12      57     125 ..      52     119 ..      46     124 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.44
   PA28_beta 58 lsrveeeaanlldqiskyfleraklvs 84
                 ++++++a +l +q++k f + a+++s
  KHJ34033.1  8 WAQLRQQARSLETQTEKLFHTYAQYAS 34
                566778888888888888888777665 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 6e-05
   PA28_beta  57 elsrveeeaanlldqiskyfleraklvskllkyphvedyrealeelDekqllslrlvlldlrnlYavly 125
                 +++++ e+ ++l +q+s+   + a l + +lk+++++  re+l+e+ +k+l +l+  + d rn   +l 
  KHJ34033.1  52 KINQILEKRDTLISQLSRLLDSEATLTASALKQNNLNRHREVLQEH-RKELNTLKSQIQDGRNRANLLS 119
                 6788899999************************************.99*******9999999876665 PP

>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   7.0   8.2e-05      0.16       5      97 ..       3     107 ..       1     113 [. 0.92

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 8.2e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-............HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Snf7   5 sLrkaerkldkkqeslekkikkleaelkklakkgn............kdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqga 91 
                 s++++  +l ++ +sle++ +kl    +++a   n            + +  ++L ++ ++ +ql++l ++ a+l++ +l+  nl+++ evl+  ++  
  KHJ34033.1   3 SINNSWAQLRQQARSLETQTEKLFHTYAQYASLANlpakpsdeekqtEFKINQILEKRDTLISQLSRLLDSEATLTASALKQNNLNRHREVLQEHRKEL 101
                 788889999*************999999999999999999999988888999*****************************************999999 PP

                 HHHHHH CS
        Snf7  92 kamkam 97 
                 +++k++
  KHJ34033.1 102 NTLKSQ 107
                 999986 PP

>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   4.9   0.00019      0.38      11      99 .]      19     105 ..       3     105 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00019
  Syntaxin-6_N  11 qkslnkaeslyrrwerlledtssstseeldetrteLrkalrsiewdledLeetvriveknpskfkidekelsrrrafveevreevkemk 99 
                   + + +k+  +y+++ +l +++ ++ s+e ++t+ ++++ l++ ++ +++L +     e+  +   ++++ l+r+r++++e r+e++++k
    KHJ34033.1  19 ETQTEKLFHTYAQYASLANLPAKP-SDEEKQTEFKINQILEKRDTLISQLSRLL-DSEATLTASALKQNNLNRHREVLQEHRKELNTLK 105
                   445555555666666777776665.99999999999999999999999999999.567777999********************99876 PP

>> TcdB_N  TcdB toxin N-terminal helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.3       0.6   1.2e+03      22      37 ..      57      72 ..      47      73 .. 0.83
   2 ?   12.1   0.3   9.1e-05      0.18       5      38 ..      77     110 ..      74     129 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.6
                HHHHHHHHHHHHHHHH CS
      TcdB_N 22 skkkyellkklkkeid 37
                ++k+ +l+++l++++d
  KHJ34033.1 57 LEKRDTLISQLSRLLD 72
                4688999999999987 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 9.1e-05
                 HHHHHHHHHHHTTTTS-HHHHHHHHHHHHHHHHH CS
      TcdB_N   5 lilenleeklnklseeqskkkyellkklkkeidn 38 
                 l++++l++ + +  +e +++++++l+ lk++i+ 
  KHJ34033.1  77 LTASALKQNNLNRHREVLQEHRKELNTLKSQIQD 110
                 899******77*********************85 PP

>> SATase_N  Serine acetyltransferase, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   1.7   0.00083       1.7      29      88 ..      59     136 ..       7     142 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00083
                 T-SSHHHHHHHHHHHH..H-BSSS-HHHHHHHHHHHHHH-T.................HHHHHHHHHHHHHHHH-TT-- CS
    SATase_N  29 sheslesaLaflLank..lasstlsaeqlrelfeealeadp.................eiveaaraDlkAvlerDpAck 88 
                 ++++l s L+ lL ++  l+ s+l++++l++  +e+l++++                 ++ +++r+D++A+++ Dp ++
  KHJ34033.1  59 KRDTLISQLSRLLDSEatLTASALKQNNLNRH-REVLQEHRkelntlksqiqdgrnraNLLSSVRSDIDAYYSSDPGVA 136
                 44556666666664431134444445544443.33444333467777777777777779*****************875 PP

>> Sec34  Sec34-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.2    0.0043       8.6      27      61 ..       2      36 ..       1      38 [. 0.89
   2 ?    7.7   2.2    0.0015       2.9       8      66 ..      49     110 ..      44     133 .. 0.82
   3 ?   -2.0   0.0       1.5   2.9e+03       6      29 ..     149     172 ..     145     202 .. 0.68

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0043
       Sec34 27 eeleekfksvsektsslheaceqlleeqkrleela 61
                +++++++ +  ++ +sl++++e+l++   ++ +la
  KHJ34033.1  2 TSINNSWAQLRQQARSLETQTEKLFHTYAQYASLA 36
                678999*******************9999998887 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0015
       Sec34   8 keeecdelleqtdealeqLeeleek...fksvsektsslheaceqlleeqkrleelaeeiee 66 
                 +e +++++le+ d++ +qL+ l ++    ++ + k ++l+++ e l e++k+l++l+ +i++
  KHJ34033.1  49 TEFKINQILEKRDTLISQLSRLLDSeatLTASALKQNNLNRHREVLQEHRKELNTLKSQIQD 110
                 556789999999999999999877611155667799************************86 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 1.5
       Sec34   6 eskeeecdelleqtdealeqLeel 29 
                 e++++  d++l+q+ +++e++   
  KHJ34033.1 149 ENSHNIADSVLSQAYAINESFGFQ 172
                 566666777777777777666544 PP

>> YlqD  YlqD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   2.1   0.00047      0.93      24      83 ..       3      67 ..       1      72 [. 0.65
   2 ?    0.6   5.7      0.35   7.1e+02      28      87 ..      52     109 ..      47     124 .. 0.53

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00047
        YlqD 24 qlqaqieqldkelqqLefqakrlikeikkqsaq.....qieeiqeqvekekserlekkkqllqql 83
                +++++  ql ++ + Le+q+++l +  ++         + +  ++q e +++++lek++ l +ql
  KHJ34033.1  3 SINNSWAQLRQQARSLETQTEKLFHTYAQYASLanlpaKPSDEEKQTEFKINQILEKRDTLISQL 67
                56788899999999999999999999876332245555555555555555555555555555555 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.35
        YlqD  28 qieqldkelqqLefqakrlikeikkqsaqqieeiqeqvekekserlekkkqllqqleqvq 87 
                 +i+q+ ++ + L  q+ rl+++ ++ +  + +  q+++++ ++ ++e +k+l+   +q+q
  KHJ34033.1  52 KINQILEKRDTLISQLSRLLDSEATLT--ASALKQNNLNRHREVLQEHRKELNTLKSQIQ 109
                 566666666666666666666665533..3333344444444444444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (226 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1413  (0.0788109); expected 358.6 (0.02)
Passed bias filter:                      628  (0.0350271); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 1607.93
//
Query:       KHJ34034.1  [L=150]
Description: putative transmembrane protein 32 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-33  115.4   0.0    1.5e-33  115.1   0.0    1.1  1  MMgT      Membrane magnesium transporter
  ------ inclusion threshold ------
        1.1    9.8   3.9        2.1    8.9   3.9    1.4  1  FtsX      FtsX-like permease family


Domain annotation for each model (and alignments):
>> MMgT  Membrane magnesium transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.1   0.0   1.6e-37   1.5e-33       3     100 .]      11     134 ..       9     134 .. 0.97

  Alignments for each domain:
  == domain 1  score: 115.1 bits;  conditional E-value: 1.6e-37
        MMgT   3 vglllLlHagYSahehsalls..........askkseqsatsLPlDitletlvslvllilglvlsaeeLkpIqlrkaagkierege............. 78 
                 +gll+L+H++YSahe+s l+s          ++ + +++  sLP Di++et+v++++ +lglvls++ L pI++r +a+kierege             
  KHJ34034.1  11 LGLLFLAHSCYSAHEYSMLHSvgvapiiqisNQGAVASALPSLPADISVETIVAIIVTCLGLVLSTSSLEPIEWRVWASKIEREGEkrifdhnflvkkg 109
                 79**************************9987778888999********************************************************** PP

        MMgT  79 ...npfeelesrpgfldirkkrkef 100
                    np+++lesrpgf+dir++r+ef
  KHJ34034.1 110 ysgNPIKALESRPGFVDIRQQRREF 134
                 ***********************98 PP

>> FtsX  FtsX-like permease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   3.9   0.00024       2.1      34      83 ..       8      76 ..       3      82 .. 0.65

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00024
        FtsX 34 viGlgl....................gllaaqllsdvllssvfsselkisidlitvliiivlllllalla 83
                +iGlgl                     + ++q+++++  +s   ++l+  i+++t+++iiv +l l+l +
  KHJ34034.1  8 LIGLGLlflahscysaheysmlhsvgVAPIIQISNQGAVASAL-PSLPADISVETIVAIIVTCLGLVLST 76
                6777773333333444444444433344445555555555544.**********************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1059.32
//
Query:       KHJ34035.1  [L=469]
Description: putative 2-oxoacid dehydrogenase acyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-70  237.4   0.1    2.7e-70  236.5   0.1    1.5  1  2-oxoacid_dh     2-oxoacid dehydrogenases acyltransferase (ca
    1.9e-16   59.6   0.1      4e-16   58.6   0.1    1.6  1  Biotin_lipoyl    Biotin-requiring enzyme
    1.1e-09   38.4   0.0    2.7e-09   37.2   0.0    1.6  1  E3_binding       e3 binding domain
  ------ inclusion threshold ------
      0.072   12.9   0.0       0.48   10.3   0.0    2.1  2  Biotin_lipoyl_2  Biotin-lipoyl like
       0.13   11.5   0.0       0.22   10.7   0.0    1.3  1  HlyD_D23         Barrel-sandwich domain of CusB or HlyD membr


Domain annotation for each model (and alignments):
>> 2-oxoacid_dh  2-oxoacid dehydrogenases acyltransferase (catalytic domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.5   0.1   7.5e-74   2.7e-70       2     232 ..     228     465 ..     227     466 .. 0.95

  Alignments for each domain:
  == domain 1  score: 236.5 bits;  conditional E-value: 7.5e-74
                   XXXXXXXXXXXXXXXXXXXXXXX.XXXEEEEEEEEE-HHHHHHHHHHHHHHHHTT-...----HHHHHHHHHHHHHHH-GGGG-EE...EES....E CS
  2-oxoacid_dh   2 keeervplsgirkaiakrlteskqeiphftlsdevdvtallelrkelkekeakeek...akltlldflikavalAlkefPelnasv..deee....k 89 
                   ++e+  +ls  ++ ++k++t+s+ +iphf + de+d+t+l e r +l++++  + +    k+++l+f+ika+++ l+++P+ln++v  +  e    +
    KHJ34035.1 228 QTETIKKLSSSQNLMFKTMTKSL-SIPHFLYADEIDFTSLSEHRVRLNRSNLLKPVgerLKISFLPFIIKALSISLNQYPILNSRVelN--EttckP 321
                   5678889****************.*************************9887776789***************************552..333569 PP

                   EEE--SS--EEEE--------EEEE--GGG--HHHHHHHHHHHHHHHTTT---GGGTSS-SEEEE---------------TT-SEEEEE---.B--T CS
  2-oxoacid_dh  90 eivvkkhvniGvAvatprGLlvPviknadkkslleiakelkelaekaregklkpedleggtftisNlGmlGvtsftPiinppqvaIlgvgrikerpv 186
                   +i++++++niGvA++tp+GLlvPvikn+ +++++ ia+el++l   a +gkl+ +dl+ggt+t+sN+G++G+t+++P++ +++v Ilg+g++++ p+
    KHJ34035.1 322 SIILRSQHNIGVAMDTPTGLLVPVIKNVSNLTVACIASELARLRILANSGKLTTQDLSGGTITVSNIGSIGGTYVSPVVVEKEVVILGIGKVRTIPA 418
                   9************************************************************************************************ PP

                   T.STT-HT---EEEEEEEEETTT--HHHHHHHHHHHHHTT-HHXXXX CS
  2-oxoacid_dh 187 v.kegelvvrkvmtlslsaDHRvidGaeaarFlntlkkllenpeell 232
                   + ++g+lv ++++++s+saDHR+idGa++ar  + ++ ++enp++++
    KHJ34035.1 419 FsENGKLVRKEICNFSWSADHRIIDGATMARAGEVVRGFIENPDSMI 465
                   *9******************************************997 PP

>> Biotin_lipoyl  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.6   0.1   1.1e-19     4e-16       5      73 .]      40     109 ..      36     109 .. 0.96

  Alignments for each domain:
  == domain 1  score: 58.6 bits;  conditional E-value: 1.1e-19
                    ESSSEEEEEE..ECSESSSTTCEE-TTSEEEEEECTTEEEEEEBSSSEEEEEESSTTTEEE-TTCEEEEE CS
  Biotin_lipoyl   5 sPmiGesveeg.vvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdtvevgdllaki 73 
                    + +iGe ++e  +++++v +  kV++ + l+ev+++K+++ei+++ aG++k ++++ G++ +vg++l+ i
     KHJ34035.1  40 LTDIGEGITECeIIQWFVRPETKVEEWDKLCEVSSDKASVEITSRFAGIIKNLHYEAGEMAKVGKPLVDI 109
                    579****************************************************************987 PP

>> E3_binding  e3 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.0   7.6e-13   2.7e-09       2      35 ..     165     198 ..     165     198 .. 0.98

  Alignments for each domain:
  == domain 1  score: 37.2 bits;  conditional E-value: 7.6e-13
                 BE-HHHHHHHHHCT--TTTS---CTTTBE-HHHH CS
  E3_binding   2 lAsPaaRklAkelGidLsdvkGtGpgGRItkeDV 35 
                 lA+Pa+R l k+l+  ++dv GtG++GR++ eDV
  KHJ34035.1 165 LATPAVRSLLKQLNTKIEDVFGTGKDGRVLTEDV 198
                 69*******************************9 PP

>> Biotin_lipoyl_2  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00014      0.48       2      34 ..      78     110 ..      71     114 .. 0.92
   2 ?   -0.5   0.0      0.32   1.1e+03      31      42 ..     212     223 ..     212     227 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00014
  Biotin_lipoyl_2   2 vvsIaapvsGrVaqlnVkdGqrVkaGdvLaelD 34 
                      +v+I+++++G ++ l+ + G   k G  L+ +D
       KHJ34035.1  78 SVEITSRFAGIIKNLHYEAGEMAKVGKPLVDID 110
                      69***************************9999 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.32
  Biotin_lipoyl_2  31 aelDsralqlal 42 
                      +++Ds++++l +
       KHJ34035.1 212 FTIDSPKYDLSV 223
                      79******9865 PP

>> HlyD_D23  Barrel-sandwich domain of CusB or HlyD membrane-fusion
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   6.1e-05      0.22      18      68 ..      77     127 ..      65     181 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 6.1e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX CS
    HlyD_D23  18 rlarvsarveGwveklyvnatgdkVkkGqpLaelyspelva.aqeeyllalk 68 
                   +++++r++G +++l+ +  g+  k G+pL++++ ++  +  + e+++ + 
  KHJ34035.1  77 ASVEITSRFAGIIKNLHYE-AGEMAKVGKPLVDIDIQDESEpKNLEFITNKL 127
                 4567899999999999999.89999999999999887655513446655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3452.98
//
Query:       KHJ34036.1  [L=518]
Description: putative phosphatidylinositol-glycan biosynthesis class s protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.8e-150  501.1   0.0   4.7e-150  500.8   0.0    1.1  1  PIG-S     Phosphatidylinositol-glycan biosynthesis class S pr


Domain annotation for each model (and alignments):
>> PIG-S  Phosphatidylinositol-glycan biosynthesis class S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  500.8   0.0  2.6e-154  4.7e-150       1     511 [.      44     512 ..      44     513 .. 0.92

  Alignments for each domain:
  == domain 1  score: 500.8 bits;  conditional E-value: 2.6e-154
       PIG-S   1 afvlvvlllGlPlWwktTtiyRapLPleeiealadgkacrvtfplevvvdasslpeeeaekllkevqqalddllekkefsletrwslrlklseseeqee 99 
                 +f+++++ +G+P+Ww tT i Ra+LP++++ ++a+gk+cr++fpl+++++a+sl+ +ea++ll+++q+alddl+   +fs+   ++lrl l  ++++  
  KHJ34036.1  44 SFWVIIITIGVPIWWTTTAIFRASLPTNQMLDWANGKECRPVFPLRIAIKADSLNINEAQNLLRTTQHALDDLN---DFSA---HHLRLYLLPRNNSIV 136
                 79************************************************************************...***9...*****9999888655 PP

       PIG-S 100 .....seseeeedgaltvrllpeedlstssaelskeskaldvvyppnsv..ss.ssdklsafvaeelvelfleeeeealisasksellsts........ 182
                      +  ++ +++al++rl+p++    ++++l+++ + ld++y+pn+v  ss  s++l++++  +l++lf ee  +a+is   s  +s +        
  KHJ34036.1 137 kdrffT--STGSEEALVIRLIPSN---DTKSSLHPYFSILDIYYTPNQVpsSSsFSSPLATYITLQLRTLFSEE--RAMISHLLSISNS-Dhgaeykps 227
                 777652..456889**********...56789*****************963369*******************..9999976663333.3699***** PP

       PIG-S 183 ....krttrsikysptyhLsfsllnedpepssWdieaaleeylsplldaLspianftvetqvqyyaplslkpefeevaavvlskddLssfvnaaEwsls 277
                     k t+r++kysp+yhL+fsl+++ ++p++W i +a+e+y++p++++L+pi++f+++tq+q+ya+         v+   l+k+dLs f+naaEw+ls
  KHJ34036.1 228 dalqKWTSRTMKYSPSYHLTFSLFTPTSTPTNWPIAHAIERYINPFIESLRPISDFSIDTQIQFYATPG-------VSGSKLRKEDLSLFINAAEWPLS 319
                 ***7667************************************************************66.......445679***************** PP

       PIG-S 278 ssisssptlnFvvyvPsksespllikdstgeqsktnsfliPqWGgvvilnppaeekksegsssaelseeelkevmevFssqLrsLLGlpseekleesss 376
                 +si+++pt+nFvvyv++ + +         +   +ns+liPqWGgvvil p++               e+l+++m +F++qL+sLLG p+        +
  KHJ34036.1 320 PSIGGEPTINFVVYVGDIEIH-------G-G---ANSWLIPQWGGVVILSPSEV--------------EDLRPAMLIFAKQLLSLLGAPE--------T 385
                 ***************998775.......3.3...47*************77764..............68*******************4........3 PP

       PIG-S 377 paslpllreweldtlkrrrtlelllsassTLgSLarLveslpnivIpdeVaedVesalellesaldaleegrleealasareaealaerAFFdpsmlgq 475
                   s p+    +l+tl+r r+++lll+assTLgSLarL+ +lp+i+Ip++Va+ V++++ +l++a++ l     +  l++ar+ae +ae+AFF++sm+gq
  KHJ34036.1 386 G-SFPF----RLQTLTRVRSASLLLKASSTLGSLARLTLALPSIAIPRSVADGVTKTIVSLHHACEGLGG---HVGLEQARNAERQAEKAFFEKSMVGQ 476
                 3.5667....**********************************************************85...68************************ PP

       PIG-S 476 lYFPdEhkvAVYlPLlgPvlvplllgllkelkelkk 511
                 +YFPdEhk+AVYlPLlgPv+vpl++g++ke+k ++k
  KHJ34036.1 477 VYFPDEHKIAVYLPLLGPVGVPLVVGVIKEVKSWYK 512
                 *********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       464  (0.0258799); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3528.48
//
Query:       KHJ34037.1  [L=245]
Description: putative bzip transcription [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00014   21.8  12.2    0.00069   19.7  12.2    2.0  1  bZIP_1    bZIP transcription factor
  ------ inclusion threshold ------
      0.024   14.6   4.8      0.059   13.4   3.7    2.1  2  FlxA      FlxA-like protein
      0.041   14.0  14.6       0.64   10.1   7.6    2.3  2  bZIP_2    Basic region leucine zipper
      0.061   12.0   1.6      0.082   11.6   1.6    1.1  1  HlyD_2    HlyD family secretion protein
      0.073   13.1   0.9      0.073   13.1   0.9    2.2  2  DUF1192   Protein of unknown function (DUF1192)
      0.087   13.1   0.4       0.19   12.0   0.4    1.6  1  HALZ      Homeobox associated leucine zipper
       0.15   11.7   4.7       0.23   11.0   4.7    1.3  1  Snf7      Snf7
       0.18   11.1   0.5       0.37   10.1   0.1    1.7  2  DegV      Uncharacterised protein, DegV family COG1307
        0.2   10.6   2.5       0.24   10.3   2.5    1.2  1  Miga      Mitoguardin
       0.22   12.1   3.3       0.41   11.3   3.3    1.5  1  YabA      Initiation control protein YabA


Domain annotation for each model (and alignments):
>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7  12.2   3.9e-07   0.00069       4      60 ..      34      95 ..      32     101 .. 0.74

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 3.9e-07
                XXXXXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.....HHHHHHHHHHHHHHHHHH CS
      bZIP_1  4 lKrekrkqkNReaArrsRqRKqaeieeLerrvkaLekeN.....ksLkseleelkkevekLk 60
                ++ +++++  Rea+r  RqR ++ i +Ler+vk+Le+       +   ++++ l+ e+e L+
  KHJ34037.1 34 AQLARKRANDREAQRNIRQRTKEHIGNLERKVKELEQSGrsssvERVLKRNQDLEAEIERLR 95
                57789******************************987511111345555555555555555 PP

>> FlxA  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.5      0.41   7.4e+02      62      85 ..      33      56 ..      30      58 .. 0.80
   2 ?   13.4   3.7   3.3e-05     0.059      23      66 ..      55      99 ..      37     109 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.41
        FlxA 62 qaQIaqlqqqqaekaqekqqseke 85
                +aQ+a++ + ++e +++ +q++ke
  KHJ34037.1 33 KAQLARKRANDREAQRNIRQRTKE 56
                589999999999888888777665 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 3.3e-05
        FlxA 23 qkQiknlqkqLkelses.deltkeekkkqqqliqaQIqqlqaQIa 66
                ++ i nl+ ++kel +s  + + e   k+ q ++a+I+ l+aQ+ 
  KHJ34037.1 55 KEHIGNLERKVKELEQSgRSSSVERVLKRNQDLEAEIERLRAQLT 99
                45699************7777777777****************95 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   7.6   0.00036      0.64       6      39 ..      36      70 ..      31      71 .. 0.88
   2 ?    7.9   0.6    0.0018       3.3      32      48 ..      82      98 ..      75     101 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00036
                XXXXX.XXXXXXXX-HHHHHHHHHHHHHHHHHHHH CS
      bZIP_2  6 rerRr.kNreAarrsRekkkakeeeleervkeLee 39
                  r+r + reA r+ R++ k++  +le++vkeLe+
  KHJ34037.1 36 LARKRaNDREAQRNIRQRTKEHIGNLERKVKELEQ 70
                55666699*************************96 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0018
                HHHHHHHHHHHHHHHHH CS
      bZIP_2 32 ervkeLeeeNaqLrqkv 48
                +r+++Le+e+++Lr+++
  KHJ34037.1 82 KRNQDLEAEIERLRAQL 98
                67888888888888876 PP

>> HlyD_2  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.6   4.6e-05     0.082      97     184 ..      48     140 ..      44     148 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4.6e-05
      HlyD_2  97 seadeklkekletlnerikeienneaieni...ekdiekldreInvlekdikesiknedikki..eelKeelnalldkKkllygskslsgkdl 184
                  ++ + +ke++ +l++++ke+e++   +++    k +++l+ eI+ l++++  +++  + ++i  + l + l+++ ++ + +  ++s + +++
  KHJ34037.1  48 RNIRQRTKEHIGNLERKVKELEQSGRSSSVervLKRNQDLEAEIERLRAQLTSQAHLPNTSQIspDMLEDLLMSQKNEVNWIPSTSSWNSSEI 140
                 688999*****************987766632258999*************998887777666213444445556666666666666655555 PP

>> DUF1192  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.77   1.4e+03       6      27 ..      18      38 ..      15      48 .. 0.55
   2 ?   13.1   0.9     4e-05     0.073      21      45 ..      76     100 ..      60     104 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.77
     DUF1192  6 rkkptheigqDLslLSveELee 27
                +kk+    +   ++LS + L  
  KHJ34037.1 18 KKKT-SGSKRSVTHLSKAQLAR 38
                5555.44555555555555543 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 4e-05
     DUF1192  21 SveELeerIalLeaEIaRleaaiak 45 
                 Sve   +r ++LeaEI+Rl+a++++
  KHJ34037.1  76 SVERVLKRNQDLEAEIERLRAQLTS 100
                 6777778899************986 PP

>> HALZ  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.4   0.00011      0.19      19      42 ..      75      98 ..      74      99 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00011
        HALZ 19 sdydsLkkenekLkaelqeLkekl 42
                s+++ ++k n+ L+ae+++L+++l
  KHJ34037.1 75 SSVERVLKRNQDLEAEIERLRAQL 98
                688999****************98 PP

>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   4.7   0.00013      0.23      12      65 ..      49      99 ..      38     109 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00013
                HHHHHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHH CS
        Snf7 12 kldkkqeslekkikkleaelkklakkgnkdralllLKqkkryekqldqldnqla 65
                ++   ++++++ i +le+++k+l ++g+   + ++LK+   +e ++++l +ql 
  KHJ34037.1 49 NI---RQRTKEHIGNLERKVKELEQSGRSSSVERVLKRNQDLEAEIERLRAQLT 99
                33...4567789*************************************99975 PP

>> DegV  Uncharacterised protein, DegV family COG1307
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.69   1.2e+03     198     227 ..      17      48 ..      14      80 .. 0.55
   2 ?   10.1   0.1   0.00021      0.37      36      74 ..      81     121 ..      75     134 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.69
                 EEEEESSHHHHHHHHHH.HH.HHHHTTTSEEE CS
        DegV 198 plakvrgqkkaleklie.li.kkdeeekkaer 227
                 p +k+ g+k+++  l + ++ +k++++++a+r
  KHJ34037.1  17 PKKKTSGSKRSVTHLSKaQLaRKRANDREAQR 48 
                 66777777777777776322344444444433 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00021
                 EECCT..CCCHHHHHHHHHHTSS--EEE---HHHHHHHHHH CS
        DegV  36 yedgv..dlspeelyeklakegelpkTsqpsvgeleelfek 74 
                 ++ ++  + ++e+l ++l  + +lp Tsq+s++ le+l+  
  KHJ34037.1  81 LKRNQdlEAEIERLRAQLTSQAHLPNTSQISPDMLEDLLMS 121
                 55555447799*************************99876 PP

>> Miga  Mitoguardin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   2.5   0.00014      0.24     165     266 ..      36     138 ..      25     198 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00014
        Miga 165 tvrsrqaedeascssvkl..gagdaiaeeevedvksaefiekleslLerayrlqeefelllla.epsslasdleksvelrskesleelalddtlsiast 260
                  +r+r + d+ ++ ++++  ++   + e++v++ +++ ++  +e +L+r   l+ e+e l ++  ++ ++ +  ++++  + e+l   ++++ + i st
  KHJ34037.1  36 LARKRAN-DREAQRNIRQrtKEHIGNLERKVKELEQSGRSSSVERVLKRNQDLEAEIERLRAQlTSQAHLPN-TSQISPDMLEDLLMSQKNEVNWIPST 132
                 4555555.4444444444004445567899****************************99988666665555.34455555566666667777777777 PP

        Miga 261 dSFvSa 266
                  S+ S+
  KHJ34037.1 133 SSWNSS 138
                 777664 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   3.3   0.00023      0.41      14      62 ..      55     108 ..      29     125 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00023
                 HHHHHHHHHHHHHHHH.....HHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXX CS
        YabA  14 eeqleelleeleelke.....elaelleenaeLeleneklrerleeeekkekek 62 
                 +e++++l ++++el++     +++++l++n++Le+e e+lr +l+++ +  +++
  KHJ34037.1  55 KEHIGNLERKVKELEQsgrssSVERVLKRNQDLEAEIERLRAQLTSQAHLPNTS 108
                 4555555555555554222227999*******************6655544443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1764  (0.0983881); expected 358.6 (0.02)
Passed bias filter:                      665  (0.0370907); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 1713.11
//
Query:       KHJ34038.1  [L=224]
Description: putative ubiquitin carboxyl-terminal hydrolase 2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-42  145.9   0.1    1.9e-42  145.4   0.1    1.2  1  Peptidase_C12  Ubiquitin carboxyl-terminal hydrolase, family 
    1.7e-11   43.9   0.3    3.3e-11   42.9   0.3    1.4  1  UCH_C          Ubiquitin carboxyl-terminal hydrolases


Domain annotation for each model (and alignments):
>> Peptidase_C12  Ubiquitin carboxyl-terminal hydrolase, family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.4   0.1   2.1e-46   1.9e-42      78     210 ..       1     131 [.       1     132 [. 0.90

  Alignments for each domain:
  == domain 1  score: 145.4 bits;  conditional E-value: 2.1e-46
                    S------STTGHHHHHHHHHHHH..STS--.-TTSHHHHHHHHHTTS-HHHHHHHHHT-HHHHHHHTTSC.......---SSTHHHHS--EEEEEE CS
  Peptidase_C12  78 vfFakQtiqnaCgtiAlLhvllNlekeaeeielgseLkkfkeftkelspeergealenseeireahnsfa.....segqteapeeeedvafHFiaf 168
                    +fFakQtiqnaCgt+AlL+vllN +   +ei+ gs+L++fk+ft+ l++e +geal+ns+ ir++hnsf+       ++te p+e+ d a+HFia+
     KHJ34038.1   1 MFFAKQTIQNACGTQALLSVLLNKD---NEIDVGSQLREFKDFTAALPAEFKGEALSNSQLIRDVHNSFSksspfV-DETEMPTEDGD-AYHFIAY 91 
                    79*********************43...678***************************************666642.34566666777.9****** PP

                    EEETTEEEEE-TTS.S-EEEEE--T..TTHHHH.HHHHHHHT CS
  Peptidase_C12 169 vpvngklyeLDGlkegPidlgeveeeeedledavrkviqeri 210
                    + +n+ lyeLDGl ++Pi++g    + e+++d+v +v+q+ri
     KHJ34038.1  92 TSINNILYELDGLHSAPISHGFS--TAEEFADKVVQVLQRRI 131
                    *********************87..468************98 PP

>> UCH_C  Ubiquitin carboxyl-terminal hydrolases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   0.3   3.6e-15   3.3e-11       6      43 ..     161     198 ..     159     200 .. 0.92

  Alignments for each domain:
  == domain 1  score: 42.9 bits;  conditional E-value: 3.6e-15
       UCH_C   6 akLeeEeeKrerwkeENaRRrHNYlPFIvelLkaLaek 43 
                 + L  Ee+Kr  w+ ENa+RrHN+l+F  elLk+ a +
  KHJ34038.1 161 EMLSREEQKRSAWRFENALRRHNFLGFTGELLKEIASA 198
                 56899*****************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1728.56
//
Query:       KHJ34039.1  [L=513]
Description: putative spry domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-20   71.0   0.0    1.5e-19   70.3   0.0    1.4  1  SPRY      SPRY domain


Domain annotation for each model (and alignments):
>> SPRY  SPRY domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.3   0.0   8.4e-24   1.5e-19       2     119 ..     191     307 ..     190     308 .. 0.96

  Alignments for each domain:
  == domain 1  score: 70.3 bits;  conditional E-value: 8.4e-24
                 EEEEEEET.CCTSSEEEEEEEETTSSSSSTSSSTSSTTEEEEETETTEEE.EETESCEEEESSSSTTSEEEEEEETTTTEEEEEETTEEEEEEEESTTT CS
        SPRY   2 hyfevkiq.saeggsisvGlateqtdlsdksgegddrgswglcgdngtrt.saeqskaygkqparegdviGvalDleegelsFtkngknlgvaFrnvrg 98 
                 +y+e ki  + e++ is+G+at++++    +  g+ ++s+++ ++  +r+ ++  ++ yg+  + +gdv+Gv++   +g+++Ft ngk l    + ++ 
  KHJ34039.1 191 YYWESKIYdKPESTLISIGVATKPYP--LFRLPGWHKYSVAYLSTGHRRYnQPFYGPIYGP-QFVQGDVVGVGYRPRTGTIFFTRNGKRLDDVAHGLKS 286
                 9*******9*****************..555579**********99999999*********.************************************* PP

                 SSEEEEEEE.STCEEEEESSE CS
        SPRY  99 aelfPvvslgngaslkinlgl 119
                 ++lfP+v ++  +s+++n+g+
  KHJ34039.1 287 QNLFPAVGANGPCSVHVNFGQ 307
                 *******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (513 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 3942.00
//
Query:       KHJ34040.1  [L=126]
Description: hypothetical protein EV44_g4125 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       249  (0.0138881); expected 358.6 (0.02)
Passed bias filter:                      174  (0.00970495); expected 358.6 (0.02)
Passed Vit filter:                         3  (0.000167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 935.53
//
Query:       KHJ34041.1  [L=283]
Description: putative 60s ribosomal protein l17 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.4e-40  136.9   0.1    3.8e-40  136.3   0.1    1.3  1  Ribosomal_L22  Ribosomal protein L22p/L17e


Domain annotation for each model (and alignments):
>> Ribosomal_L22  Ribosomal protein L22p/L17e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.3   0.1   2.1e-44   3.8e-40       1     103 []     114     248 ..     114     248 .. 0.97

  Alignments for each domain:
  == domain 1  score: 136.3 bits;  conditional E-value: 2.1e-44
                    EEEEEESS-HHHHHHHHHHHTTSBHHHHHHHHHT.-SST................................THHHHHHHHHHHHHHHH..HT-GGG CS
  Ribosomal_L22   1 akgsnlrvsfkklrevarlIrgmkveeAlkyLkf.skkk................................aakfvlklLknaeanaelkgldvds 63 
                    a+gs+lrvsfk++re+a++++g k+++A+k+L++ + +k                                +a+f+l lLknaeana++kgld  +
     KHJ34041.1 114 AHGSYLRVSFKNTRETAQAVNGWKLQRAVKFLQNvQ-EKteavpmrryaggtgraaqgkqfgvtrarwpvkSAQFLLGLLKNAEANADTKGLDTGN 208
                    6799******************************63.4447******************************************************* PP

                    EEEEEEEEEEEEEEEEEEEESTTEEEEEEEEEEEEEEEEE CS
  Ribosomal_L22  64 lvIeeiqvnkgpklkrrtyrArGrinpirkspchievvlk 103
                    l+I++iqvn++pk++rrtyrA+Grinp++++pchie++l+
     KHJ34041.1 209 LIIKHIQVNQAPKQRRRTYRAHGRINPYMSNPCHIELILT 248
                    **************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 2065.53
//
Query:       KHJ34042.1  [L=141]
Description: putative 40s ribosomal protein s18 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-51  173.8   2.2    2.1e-51  173.6   2.2    1.0  1  Ribosomal_S13  Ribosomal protein S13/S18
  ------ inclusion threshold ------
      0.014   14.2   0.0      0.014   14.2   0.0    1.2  1  FbpA           Fibronectin-binding protein A N-terminus (FbpA
        0.1   13.1   0.2       0.25   11.8   0.2    1.6  1  PP28           Casein kinase substrate phosphoprotein PP28
       0.14   12.7   0.1       0.42   11.2   0.0    1.9  2  Syntaxin-6_N   Syntaxin 6, N-terminal


Domain annotation for each model (and alignments):
>> Ribosomal_S13  Ribosomal protein S13/S18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.6   2.2   4.8e-55   2.1e-51       9     128 .]       9     129 ..       2     129 .. 0.97

  Alignments for each domain:
  == domain 1  score: 173.6 bits;  conditional E-value: 4.8e-55
  Ribosomal_S13   9 gkkkveialtaikGiGrrkakiilkkadvdedkrigelteeeiekieeivenkaqykipnwi.nrqkdikdGkdshvvendlrrklredieRlkki 103
                    gk+kv++alt+ikG+Grr+++ ++kkadvd +kr+gelt ee+e+i++i++n++qykip+w+ nrq+di dGk+s+ ++n +++klred+eRlkki
     KHJ34042.1   9 GKQKVMYALTNIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIIQNPTQYKIPSWFlNRQRDIVDGKNSQILANGVDSKLREDLERLKKI 104
                    789********************************************************************************************* PP

  Ribosomal_S13 104 rsyrGlRHkrGlkvRGQrTkttgRt 128
                    r++rGlRH++Gl+vRGQ+ kttgR+
     KHJ34042.1 105 RAHRGLRHYWGLRVRGQHSKTTGRR 129
                    ************************7 PP

>> FbpA  Fibronectin-binding protein A N-terminus (FbpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   3.1e-06     0.014     194     237 ..      17      60 ..       2     105 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.1e-06
                 HHHBTTXXHHHHHHHHTTXSSSH...............HHHHHH CS
        FbpA 194 vkafqGlspllaeelleragldketsakelseedlerlyealqe 237
                 +++++G+++ +++ ++++a +d +++a el++e+ler+ + +q+
  KHJ34042.1  17 LTNIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIIQN 60 
                 57899********************************9988876 PP

>> PP28  Casein kinase substrate phosphoprotein PP28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.2   5.6e-05      0.25      53      72 ..      89     108 ..      80     112 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.6e-05
        PP28  53 gkTeeakaDLaRLalireqR 72 
                 g  ++ ++DL+RL+ ir++R
  KHJ34042.1  89 GVDSKLREDLERLKKIRAHR 108
                 5567789***********99 PP

>> Syntaxin-6_N  Syntaxin 6, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   9.3e-05      0.42      53      95 ..      44      85 ..       7      87 .. 0.77
   2 ?   -2.8   0.0       2.2   9.7e+03      55      61 ..      96     102 ..      92     124 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9.3e-05
  Syntaxin-6_N 53 iewdledLeetvriveknpskfkidekelsrrrafveevreev 95
                   e + e+Le+ v i++ np+++ki +  l+r+r++v+  ++++
    KHJ34042.1 44 GELTSEELERIVTIIQ-NPTQYKIPSWFLNRQRDIVDGKNSQI 85
                  455679******7775.7*****************99877776 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.2
  Syntaxin-6_N  55 wdledLe 61 
                   +dle L+
    KHJ34042.1  96 EDLERLK 102
                   4444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       466  (0.0259914); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1074.88
//
Query:       KHJ34043.1  [L=532]
Description: putative carboxypeptidase y [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.1e-125  420.4   0.9   1.3e-125  420.1   0.9    1.0  1  Peptidase_S10  Serine carboxypeptidase
    0.00036   21.1   0.2     0.0049   17.4   0.2    2.3  1  Carbpep_Y_N    Carboxypeptidase Y pro-peptide


Domain annotation for each model (and alignments):
>> Peptidase_S10  Serine carboxypeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  420.1   0.9  1.5e-129  1.3e-125       8     419 .]     128     528 ..     121     528 .. 0.93

  Alignments for each domain:
  == domain 1  score: 420.1 bits;  conditional E-value: 1.5e-129
                    SSEEEEEEEECSTTTTEEEEEEEEE-SSGTTTS-EEEEE--TTTB-THHHHHHTTSSEEEETTTTSEEEE-TT-GGGCSEEEEE--STTSTT-EET CS
  Peptidase_S10   8 nfkqysGYldveeeedkslFYwfveseknpeedplvlWLnGGPGCsSldGlleElGPfrvnkdstkkleenpysWnkvanvlfldqPvGvGFSysn 103
                    ++kqysGYld + e+dk+lFYwf+es+++p++dp++lWLnGGPGCsSl+Gl+ ElGP +vn  ++ +l +np+sWn +a+v+fldqPv+vG+Sys+
     KHJ34043.1 128 TVKQYSGYLDDN-ENDKHLFYWFFESRNDPKNDPVLLWLNGGPGCSSLTGLFAELGPASVN--KNLTLAYNPFSWNANASVIFLDQPVNVGYSYSS 220
                    589********9.77**********************************************..679****************************** PP

                    TSSGS--SHHHHHHHHHHHHHHHHHHSTCGTTSEEEEEEETTHHHHHHHHHHHHHTHCCH--SSTSEEEEEEEESE-SBHHHHHCCHHH....HHH CS
  Peptidase_S10 104 tksdvktddeevaedlyefLkkffekfpeyksrdfyitGESYaGhyvPalakeilkknkkekkkkinLkGlligNglideaeqvnsyve....fay 195
                     + +   d+  +++d+y++L+ ff++fpey+++df+i+GESY+GhyvP++++eil+ +++    +inLk++ligNg++d+ +q++++ +       
     KHJ34043.1 221 RSVS---DTVAAGKDIYALLTLFFKQFPEYATQDFHIAGESYGGHYVPVFVSEILSYKNR----NINLKSALIGNGITDPLTQYDYLRPmacgEGG 309
                    *999...9**************************************************88....8************************5555555 PP

                    HTTSSHHHHHHHHHHHHEETHHHHHHHHHHHHHHHHHHHHH..........HHHHCHCEETTETTSEETTSSEEHHHCTTCCCCTTTTTCHHHHHH CS
  Peptidase_S10 196 ehgliseeeyeslkkacekkeeleqesekcanllekaskva..........vekenkglnvynileeccklkaelkksstdaqggedpydesyvek 281
                    + ++++e++++++++a     ++++ +++c+++ + + +v             ++n+g nvy+++++c            ++ ++ ++  +  +++
     KHJ34043.1 310 YPAVLEESQCQRMDNAL---PRCQSLIKNCYESESIWACVPagiycnnaliGPYQNSGQNVYDVRTQC------------EDPENLCYSITGWIRD 390
                    67799999999999999...9****************98779988888887555778***********............45566677778899** PP

                    HHTSHHHHHHTT--TTSSS--SB-HHH...HHHCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-STT-HHHHHHHHHHTECTTECCSCCCEEEE.T CS
  Peptidase_S10 282 ylnkkeVrkalhvnasvkkweecndsv...feqleddisksveeileellesglrvliynGdvDlicnvlgteawikklelsgkkefrpwevsp.k 373
                    yln+k+V++ l+  a+v ++e c+d++   f + + d++k+++++++ +l++ ++ liy+Gd+D+icn+lg++aw+++le++gk+ f+++e+++ +
     KHJ34043.1 391 YLNQKHVMNELG--AEVSSYEGCSDTInrnFLF-HGDWMKPYHKLVPGILDQ-IPLLIYAGDADFICNWLGNKAWTEALEWKGKSLFNKAESKNiE 482
                    ************..5799*********986666.55666*************.***************************************9878 PP

                    TTCESEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHHHHHHTT CS
  Peptidase_S10 374 kengqvaGyvkeyenltfltvkgaGHmvPedkpeealqllerfisg 419
                      ng+ +G++k+ +n+tfl++++aGHmvP+++pe +l++l+r+++g
     KHJ34043.1 483 LGNGNKYGKIKSSGNFTFLQIFEAGHMVPMNQPEVSLDFLNRWLHG 528
                    89*****************************************985 PP

>> Carbpep_Y_N  Carboxypeptidase Y pro-peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.2   5.5e-07    0.0049      59     124 ..      31      91 ..       1      92 [. 0.86

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 5.5e-07
  Carbpep_Y_N  59 fekiskvlneplkeltseakkiWsemelkfPdavsklkfktkpkkketkksdkfWdfvVkdakvpN 124
                   e+i  ++++++ +l  +   iW+e+    Pd +++++  +  +k++++ +d+ Wdf  k++++ N
   KHJ34043.1  31 YETIPTPVKNEIADLILNSESIWDEI----PDFLDSMSRLS-NPKPSSRNPDSTWDFITKGSDIHN 91 
                  577788899999999999999***97....99999999886.88999****************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3672.87
//
Query:       KHJ34044.1  [L=299]
Description: putative upf0023 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-41  141.2   1.7    1.4e-41  141.2   0.6    1.6  2  SBDS_C          SBDS protein C-terminal domain
    4.6e-32  109.9   1.7    5.1e-32  109.8   0.2    1.9  2  SBDS            Shwachman-Bodian-Diamond syndrome (SBDS) prot
  ------ inclusion threshold ------
      0.056   13.9   0.0       0.12   12.8   0.0    1.6  1  K-cyclin_vir_C  K cyclin, C terminal


Domain annotation for each model (and alignments):
>> SBDS_C  SBDS protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.75   4.5e+03      61      89 ..      20      45 ..       9      63 .. 0.68
   2 !  141.2   0.6   2.3e-45   1.4e-41       1     115 [.     108     278 ..     108     279 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.75
                -EE-EEEEEEEE-...CCCHHHHHHHHHH CS
      SBDS_C 61 iqrarmrlritcptsikdkilklieqves 89
                 + a+ r ++ c    k+k+l++ + +e+
  KHJ34044.1 20 LKKAKKRFEVACY---KNKVLEWRSGIEK 45
                5667777888888...7777766655544 PP

  == domain 2  score: 141.2 bits;  conditional E-value: 2.3e-45
                 HHHHHHHHHHHHEEBTTTTB---HHHHHHHH...............................HHTT----TTS-CCCCHHHHHHHHT..TTS--EE-EE CS
      SBDS_C   1 iekeiieivaeklvnpqtkrpytttmIekal...............................kelgtsvktnksaksQalevikaLi..qeipiqrarm 66 
                 +++e+i+iva+klv+p+tkr+yt++mIekal                               ++++t+v+ ++saksQal+++kaLi  q+ip++rarm
  KHJ34044.1 108 VHNEVISIVASKLVDPKTKRVYTPSMIEKALdtlcskgsqsqhdknttpitgedkilrskvkEHVWTGVVATRSAKSQALDAMKALIthQPIPVARARM 206
                 69***********************************************************88***********************999********** PP

                 EEEEEE-..........................CCCHHHHHHHHHH.....S.EEEEEEEEGGGHHHHHHHH CS
      SBDS_C  67 rlritcptsi.......................kdkilklieqvesqkvaekewevvvliePgaykeleefv 115
                 ++r+tcp si                       kd+il++ie++e+q++ e+ew+ ++++ePg +k l +f+
  KHJ34044.1 207 KIRVTCPISIiklpvksnsakvseneenfkgtvKDRILNFIETLEAQDIFESEWTATGFVEPGTFKILVDFI 278
                 *******8889***********************************************************98 PP

>> SBDS  Shwachman-Bodian-Diamond syndrome (SBDS) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.8   0.2   8.6e-36   5.1e-32       1      88 []      14     102 ..      14     102 .. 0.98
   2 ?   -1.9   0.1      0.59   3.5e+03      53      74 ..     226     247 ..     221     259 .. 0.67

  Alignments for each domain:
  == domain 1  score: 109.8 bits;  conditional E-value: 8.6e-36
                 T-EEEEEEETTEEEEEEE-HHHHHHHHCTT---HHHHBSSSS-EEETTTTEE--HHHHHHHHS--.-HHHHHHHHHHHSEEE--HHHHH CS
        SBDS   1 nvsivrykkgkkrFeiavyknklleyregkeidLsevlqsekiFtnaskGetaskselekafgte.skdeiikeILkkGeiqvsaeerk 88 
                 nvs+vr+kk kkrFe+a+yknk+le+r+g e dL++vlq++++F+n+skG+ta+  +l+kafg + s++eii eIL kGe+qv ++er+
  KHJ34044.1  14 NVSLVRLKKAKKRFEVACYKNKVLEWRSGIEKDLDNVLQINSVFLNVSKGQTAPSVDLAKAFGPNtSVNEIILEILSKGELQVGDKERQ 102
                 89*************************************************************999********************985 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.59
                 --HHHHHHHHS---HHHHHHHH CS
        SBDS  53 askselekafgteskdeiikeI 74 
                 a+ se e+ f+ + kd i+++I
  KHJ34044.1 226 AKVSENEENFKGTVKDRILNFI 247
                 5666666777777667776665 PP

>> K-cyclin_vir_C  K cyclin, C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.1e-05      0.12      19      63 ..     102     147 ..      88     169 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.1e-05
  K-cyclin_vir_C  19 keqldalhsevvelvtkalvdPktGsl.Paslvaaagcallvlaav 63 
                     + ql+ +h+ev   v   lvdPkt  +  +s++  a  +l + ++ 
      KHJ34044.1 102 QAQLERVHNEVISIVASKLVDPKTKRVyTPSMIEKALDTLCSKGSQ 147
                     56899*******************8753789999987777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2295.01
//
Query:       KHJ34045.1  [L=144]
Description: hypothetical protein EV44_g3687 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1311  (0.0731218); expected 358.6 (0.02)
Passed bias filter:                      573  (0.0319594); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 1155.55
//
Query:       KHJ34046.1  [L=198]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.61   10.3   5.7        2.5    8.4   5.7    1.9  1  CRA_rpt   Cytoplasmic repetitive antigen (CRA) like repeat


Domain annotation for each model (and alignments):
>> CRA_rpt  Cytoplasmic repetitive antigen (CRA) like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   5.7   0.00014       2.5      25      36 ..     110     121 ..      92     126 .. 0.57

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00014
     CRA_rpt  25 akvaEaeKrkaa 36 
                  kv+EaeKr+aa
  KHJ34046.1 110 RKVVEAEKRRAA 121
                 366666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1509.67
//
Query:       KHJ34047.1  [L=269]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       492  (0.0274416); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 2031.22
//
Query:       KHJ34048.1  [L=518]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       896  (0.0499749); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.24s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3496.03
//
Query:       KHJ34049.1  [L=175]
Description: hypothetical protein EV44_g5543 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.013   15.4   0.5      0.013   15.4   0.5    2.0  2  DUF2721   Protein of unknown function (DUF2721)
        3.7    6.2   6.2        9.8    4.8   6.4    1.6  1  DUF2207   Predicted membrane protein (DUF2207)


Domain annotation for each model (and alignments):
>> DUF2721  Protein of unknown function (DUF2721)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.5   1.5e-06     0.013      32      86 ..      14      66 ..       5      98 .. 0.78
   2 ?    0.5   1.6      0.06   5.4e+02      93     119 ..     107     133 ..      78     141 .. 0.55

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.5e-06
     DUF2721 32 LedeleelaeeeeedeelakeiknlrrRarlirrailllvlsallvvlvvlllfl 86
                L++  ++l+ee ++  + ++ +++ r+R+++++   l+lvl++l++v+ ++++f 
  KHJ34049.1 14 LNAANKKLPEEISN--SQDHALQIRRKRVKYLSLVSLCLVLGVLCTVMECFAIFN 66
                55555656666554..555567777****************************96 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.06
     DUF2721  93 dlsllaailfvlalllllvslllflrE 119
                 d+++   ++++   +l++++l+++l E
  KHJ34049.1 107 DVETPSWAVAMGTPVLVFAALFFLLKE 133
                 333333344444445555555555555 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   6.4    0.0011       9.8     355     432 ..      16     133 ..       5     149 .. 0.72

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0011
     DUF2207 355 kalkkwksavkk.kergyfdkkgkkklkklsalglgliilglilillallllvll.......................................lvfll 413
                 +a kk+ +++ + +   +  ++++ k+ +l  l l+l++l++++ ++a++ + ++                                          ++
  KHJ34049.1  16 AANKKLPEEISNsQDHALQIRRKRVKYLSLVSLCLVLGVLCTVMECFAIFNIEYCvgedlmhlywslwsilqvgsniaifgvilqfwiilgdveTPSWA 114
                 555555555555655666677888999999999999999999999999998888899999999999999997777777777777777777777655555 PP

     DUF2207 414 illlillliaiivlllfsr 432
                 + +   +l+++++++l++ 
  KHJ34049.1 115 VAMGTPVLVFAALFFLLKE 133
                 5555555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1330.82
//
Query:       KHJ34050.1  [L=826]
Description: hypothetical protein EV44_g1939 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.093   12.5   0.0       0.23   11.2   0.0    1.6  1  zf-DNA_Pol  DNA Polymerase alpha zinc finger


Domain annotation for each model (and alignments):
>> zf-DNA_Pol  DNA Polymerase alpha zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   1.3e-05      0.23      42      91 ..      35      85 ..      18      90 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 1.3e-05
                TTEEEET...TT--B--HHHHHHHHHHHHHHHHHHHHH--EEES-TTT--E CS
  zf-DNA_Pol 42 asglrCs.nesCkaslstaslvnqlelairkhiskYYegwlvCddptCgnr 91
                 + ++C  +++ ++s ++a+++ +l+ ++r++i+k+ ++  + +d++C+n+
  KHJ34050.1 35 RKAIECGyQPKGNKSTQNANVTTRLKGKARQQIKKFLKNPSTTNDDECSNQ 85
                5556664256788999********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (826 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.40
# Mc/sec: 6123.48
//
Query:       KHJ34051.1  [L=142]
Description: hypothetical protein EV44_g3580 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.098   12.8   0.0       0.14   12.3   0.0    1.2  1  DUF2200   Uncharacterized protein conserved in bacteria (DUF2


Domain annotation for each model (and alignments):
>> DUF2200  Uncharacterized protein conserved in bacteria (DUF2200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   7.8e-06      0.14      50      92 ..      84     126 ..      73     136 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 7.8e-06
     DUF2200  50 kvtfeeffeeapklnpnaslikGviCgvrveeiedplmkkiRy 92 
                 + + + ff+eap+  p++ ++kG+i   r  + ++ l++ +R+
  KHJ34051.1  84 SLSPQPFFHEAPHDWPREYRVKGSILSQRTSDESKLLVQMVRC 126
                 566688**************************9999*****95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       273  (0.0152267); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.20s 00:00:00.58 Elapsed: 00:00:00.37
# Mc/sec: 1165.34
//
Query:       KHJ34052.1  [L=115]
Description: hypothetical protein EV44_g3926 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 852.26
//
Query:       KHJ34053.1  [L=197]
Description: putative coatomer zeta subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-15   55.7   3.2    3.2e-14   53.1   3.2    1.9  1  Clat_adaptor_s  Clathrin adaptor complex small chain


Domain annotation for each model (and alignments):
>> Clat_adaptor_s  Clathrin adaptor complex small chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.1   3.2   1.8e-18   3.2e-14       2     138 ..      10     160 ..       9     164 .. 0.78

  Alignments for each domain:
  == domain 1  score: 53.1 bits;  conditional E-value: 1.8e-18
                     EEEEEEE-.TTS-EEEEEES.SSS-CH.............HHHHHHHHHHHHHHTT-SSS.......-SEEEETTEEEEEEEETTEEEEEEEETT CS
  Clat_adaptor_s   2 ikaililn.kkgkvrlakfy.tavddk.............kkqklieevyelvsaRdskl.......sniveledlkviYkryasLYFvvivdeq 74 
                     ++aililn ++g++ ++k+y  + +++             k qk++e+           l       s+i+ +++  v+Yk   ++  +vi    
      KHJ34053.1  10 VNAILILNtEDGSRVFTKYYnAPHNSNsnstpnaspfgdiKAQKAFEKGL---------LekttkqtSDIILYDNRIVLYKCESDVMIYVIGGID 95 
                     789999993479999*****533333211111111111113344444443.........144455559*******999***************** PP

                     S-HHHHHHHHHHHHHHHHHHCT.S-SHHHHHHCHHHHHHHHHCCEETTEES---HHHHHHCHHHH CS
  Clat_adaptor_s  75 eneliilelihlfvesLdkyfg.nVceldlvfnfekvylildEivsgGeiletskkevlkrvell 138
                     ene+++ ++i  + +sL  +f+  V ++ +++n++ v l +dEiv+ G ilet+ + + +rv+ +
      KHJ34053.1  96 ENEVMLYNVIIALRDSLHLLFKqTVDKRTVIENYDLVALTVDEIVDDGIILETDSTIIAQRVSKA 160
                     *********************989**********************************9999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1527.92
//
Query:       KHJ34054.1  [L=613]
Description: putative benzoate 4-monooxygenase cytochrome p450 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.1e-05   23.8   0.1    7.4e-05   22.6   0.1    1.7  1  F-box-like    F-box-like
    0.00062   19.6   0.1     0.0028   17.5   0.1    2.2  1  F-box         F-box domain
  ------ inclusion threshold ------
      0.064   13.2   0.1       0.34   10.9   0.0    2.2  2  F-box-like_2  F-box-like domain


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.1   1.2e-08   7.4e-05       3      36 ..     113     162 ..     111     171 .. 0.71

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 1.2e-08
  F-box-like   3 rLPdEiLlqIF...........syLppsd........LlrlalVCrrWrrval 36 
                 +LPdEiL++I            +yL              + +l+Crr+++v +
  KHJ34054.1 113 DLPDEILMHICeyvqgreeyyiRYL---PeinvgvqeVKNMRLTCRRFCNVSS 162
                 8**********55555554444445...044444444*************973 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.1   4.7e-07    0.0028       2      39 ..     110     163 ..     109     170 .. 0.92

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 4.7e-07
                 HHHHS-HHHHHHHHHTS-HHH................HHHHCTT-HHHHHHHTT CS
       F-box   2 tlsrLPsevlrhILerLplsd................llalrrVSkgwrilids 39 
                 ++++LP+e+l+hI e++  ++                + ++r++++++ ++  +
  KHJ34054.1 110 HIFDLPDEILMHICEYVQGREeyyirylpeinvgvqeVKNMRLTCRRFCNVSSH 163
                 699*********************************************998765 PP

>> F-box-like_2  F-box-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   5.7e-05      0.34      13      38 ..     102     127 ..      97     220 .. 0.88
   2 ?   -1.9   0.0      0.55   3.3e+03      12      39 ..     362     389 ..     356     412 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 5.7e-05
  F-box-like_2  13 aapkfrsltllDlPdellelifkgCk 38 
                   + p  r+l++ DlPde+l  i ++ +
    KHJ34054.1 102 SRPYLRQLHIFDLPDEILMHICEYVQ 127
                   5688899**************99876 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.55
  F-box-like_2  12 naapkfrsltllDlPdellelifkgCkd 39 
                    + +k r+++l D P  ll  i+k  k+
    KHJ34054.1 362 ITWEKGRRFQLGDPPFALLFQIPKAIKE 389
                   5678889999999999999888887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       469  (0.0261587); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.38
# Mc/sec: 4895.45
//
Query:       KHJ34055.1  [L=565]
Description: putative u3 small nucleolar rna-associated protein 18 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.5e-05   24.1   4.4      0.079   13.9   0.1    5.1  6  WD40         WD domain, G-beta repeat
    7.6e-05   22.9   0.4        1.1    9.6   0.1    3.8  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
      0.048   13.6   0.4         11    6.1   0.0    2.7  2  PD40         WD40-like Beta Propeller Repeat
       0.05   13.5   0.0       0.14   12.1   0.0    1.8  2  DUF2415      Uncharacterised protein domain (DUF2415)


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.0     0.009        40       7      29 ..     233     256 ..     227     271 .. 0.80
   2 ?   -1.9   0.0       1.7   7.7e+03      19      38 .]     295     314 ..     272     314 .. 0.67
   3 ?   -3.3   0.0         4   1.8e+04      16      26 ..     339     349 ..     325     357 .. 0.78
   4 ?    0.9   0.2      0.22   9.7e+02      23      38 .]     443     458 ..     439     458 .. 0.91
   5 ?    0.2   0.0      0.35   1.6e+03      11      26 ..     488     503 ..     478     532 .. 0.73
   6 !   13.9   0.1   1.8e-05     0.079      13      38 .]     537     562 ..     522     562 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.009
                 EESS.SSEEEEEEETTSSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGs 29 
                  + H s + sl+f+p+ + ++s++
  KHJ34055.1 233 PSNHtSAILSLSFHPELPIILSSG 256
                 4679777************99876 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.7
                 ETTSSEEE.EEETTSEEEEEE CS
        WD40  19 spdgawla.sGsdDgtvriWd 38 
                 +p g+ ++ sG   +  +iWd
  KHJ34055.1 295 HPKGDKIIfSGR-RKYFHIWD 314
                 566666542655.78888887 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 4
                 EEEETTSSEEE CS
        WD40  16 lafspdgawla 26 
                 ++ sp g++la
  KHJ34055.1 339 IKISPCGRYLA 349
                 56899999986 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.22
                 SEEEEEETTSEEEEEE CS
        WD40  23 awlasGsdDgtvriWd 38 
                 +w++ Gs  g + i+d
  KHJ34055.1 443 RWVVIGSQSGIINIYD 458
                 79999*********98 PP

  == domain 5  score: 0.2 bits;  conditional E-value: 0.35
                 SSEEEEEEETTSSEEE CS
        WD40  11 ssvtslafspdgawla 26 
                 ++++ +  spdg++++
  KHJ34055.1 488 KPISQIVISPDGQLMS 503
                 4688888999999953 PP

  == domain 6  score: 13.9 bits;  conditional E-value: 1.8e-05
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 +t++ fs ++++l+ G d g++++Wd
  KHJ34055.1 537 ITAVTFSNESNLLVVGNDSGKIHMWD 562
                 9***************99*******9 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.1   0.00025       1.1      28      90 ..     325     389 ..     305     391 .. 0.79
   2 ?    2.0   0.0     0.059   2.6e+02      39      73 ..     381     415 ..     375     420 .. 0.84
   3 ?    0.3   0.0       0.2     9e+02      38      80 ..     487     531 ..     482     534 .. 0.78
   4 !    8.6   0.0    0.0005       2.2      28      68 ..     522     564 ..     495     565 .] 0.77

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00025
  ANAPC4_WD40  28 rvwtleedkedsevrsLaWkpdgklLavay....sdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  rv+   +++e++   +++ +p g+ La       + g +++lda +++ ++s++++  + ++   W 
   KHJ34055.1 325 RVY--GQKDEQKFMDKIKISPCGRYLALQAtskkKGGIINILDATTTQWISSMRIEGAQGISDFAWW 389
                  344..4588999999***********975411113479******************99999999996 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.059
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldaesgkvv 73 
                  + ++++aW  +g+ L v  + gev   ++++   v
   KHJ34055.1 381 QGISDFAWWRNGNGLTVISKIGEVAEWSVNDRAYV 415
                  67899*****************9998888876665 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.2
  ANAPC4_WD40  38 dsevrsLaWkpdgklLava..ysdgevrlldaesgkvvhslsvks 80 
                   + ++++  +pdg+l+ ++  +++ ++rl++  s +v +++++++
   KHJ34055.1 487 TKPISQIVISPDGQLMSFSsqWKKDALRLVHLASCTVYRNWPTDR 531
                  6778999999****9987622678899999999999888887765 PP

  == domain 4  score: 8.6 bits;  conditional E-value: 0.0005
  ANAPC4_WD40  28 rvwtl..eedkedsevrsLaWkpdgklLavaysdgevrlldae 68 
                   v+    ++ ++ ++++++ ++++ +lL+v+ + g++++ d+ 
   KHJ34055.1 522 TVYRNwpTDRTPFGRITAVTFSNESNLLVVGNDSGKIHMWDIR 564
                  555555556677789***********************99975 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.1    0.0066        30      15      37 ..     293     313 ..     286     319 .. 0.83
   2 ?    6.1   0.0    0.0024        11      13      27 ..     492     506 ..     487     507 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0066
                 EE-TTSSEEEEEEECT.TCEEEE CS
        PD40  15 sfSPDGkrlaFsSdRgsGkpdIy 37 
                 ++ P G +++Fs +R+  ++ I+
  KHJ34055.1 293 FLHPKGDKIIFSGRRK--YFHIW 313
                 67899*********98..55554 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0024
                 EEEE-TTSSEEEEEE CS
        PD40  13 aPsfSPDGkrlaFsS 27 
                  + +SPDG+ + FsS
  KHJ34055.1 492 QIVISPDGQLMSFSS 506
                 5789*******9999 PP

>> DUF2415  Uncharacterised protein domain (DUF2415)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       2.9   1.3e+04      25      35 ..     308     318 ..     301     322 .. 0.72
   2 ?   12.1   0.0   3.2e-05      0.14       6      33 ..     540     564 ..     535     565 .] 0.86

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 2.9
     DUF2415  25 grvHlvDlRtg 35 
                  + H+ Dl +g
  KHJ34055.1 308 KYFHIWDLESG 318
                 57899999765 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 3.2e-05
     DUF2415   6 ckFSpesglnDLLvisEhvgrvHlvDlR 33 
                 + FS +++   LLv+  ++g++H+ D+R
  KHJ34055.1 540 VTFS-NES--NLLVVGNDSGKIHMWDIR 564
                 6799.555..6****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (565 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 4068.44
//
Query:       KHJ34056.1  [L=559]
Description: putative triacylglycerol lipase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.7e-78  262.3   0.0    1.3e-77  261.9   0.0    1.1  1  COesterase     Carboxylesterase family
    7.4e-05   22.7   0.0    0.00018   21.4   0.0    1.6  1  Abhydrolase_3  alpha/beta hydrolase fold
  ------ inclusion threshold ------
      0.012   15.1   0.0      0.027   13.9   0.0    1.5  1  Peptidase_S9   Prolyl oligopeptidase family


Domain annotation for each model (and alignments):
>> COesterase  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  261.9   0.0   2.1e-81   1.3e-77       5     512 .]      37     550 ..      33     550 .. 0.85

  Alignments for each domain:
  == domain 1  score: 261.9 bits;  conditional E-value: 2.1e-81
                 EEETTEEEEEEEEEESTCSEEEEEEEEESSB---GGGTTS--BE----SSEEECBS---BESEECSSSSSCGHHCHHHBES---EEEEEEESSSSSTTS CS
  COesterase   5 vetslGkvrGkrvklksekevdaFlGiPYAepPvgelRFkkPepaepwtgvrdAtkfspaCpqnaeksekeekeleawvsEDCLyLnvytPkekkeakk 103
                 +++ + + +G ++++     v+ +lGi++A++P+ +lR+++P+ +       dA+  +++C+   e   +  +     +sEDCL+Ln++tP+++ + ++
  KHJ34056.1  37 IDLGYSQYQGVKNPVA---AVKYWLGIRFAAAPLADLRWRAPVDPVVNYTLQDASIPPNVCIGIGEYGTS--V-----QSEDCLFLNIFTPANA-TPSS 124
                 5555666667666655...89***********************9999999***********99964443..2.....89***********996.7888 PP

                 SEEEEEEE--STTTS-BGCGS-THHHHHHH..TSEEEEE----HHHHH-B-SS..TTSBS-HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHH CS
  COesterase 104 klPVlVwihGggfqtgsaseydgsaLaaeg..nvivVtinYRlGvlGFlstgd..eeapGNvGllDqvlALrWVkenIasFGGdpervtlfGesAGaas 198
                 +lPV ++i Ggg+ ++s  +y++++++++   ++ivV  ++R+ ++GFl+ ++  ++ + NvG+lDq+ AL+WV++ I +FGGdp rv + G+sAGa s
  KHJ34056.1 125 RLPVWFFIPGGGYSVNSDPNYNATEIIKQSggKIIVVETSFRVSAFGFLASEKirQDGSLNVGILDQRKALKWVQKYITKFGGDPGRVVIHGDSAGAGS 223
                 88*************************99889*******************776688899*************************************** PP

                 HHHHHHSGGGT..TSBSEEEEES--TTSTTTSBSHHHHHHHHHHHHTTS-CSSHHHHHHHHHCS-HHHHHHCCGG...SSSSSSTTC-SSS-B--SSSS CS
  COesterase 199 vsllllsplsr..glfkraIlqSGsalspwaiqkkarkrakklakkvgckassskelveclrsksaeelldaqek...aleasssklvsfaPvvdgdfl 292
                 v+++l+    r   lf  aIl+S    ++  + +    + +++ +  +c  sss++++ clr+++ + l  a+++   + +a++  +++ aP vdgd++
  KHJ34056.1 224 VAMHLIAYNGRndSLFSGAILESVFFPTQRKVID-YEFQYNNFVSLSNC--SSSNDTLACLRNTPLSILKVANSNpapFPNATAPSRFPYAPCVDGDLI 319
                 *******7776457*********76666666665.6777899*******..9999*****************99999988899999************* PP

                 SS-HHHHHHCGC..CSEEEEEEETTTTHHHHCCHSTTTSSSSHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHSTTTSSTCHHHHHHHHHHHHHHHH CS
  COesterase 293 pekPeellkseg..kvplliGvnkdegllflaylldkeksvkkkeeklsesllkdelyleaekkeelseaikeeytdeadrddaeksrkallelltdvl 389
                 ++ P++l+   +  +vp++iG  +deg+ f+++   +         +  ++ +++++ +    +e+  e++ + y   +    ++ +  +++ ++++++
  KHJ34056.1 320 TDYPAKLFLDGNflQVPIMIGGDTDEGNDFVNNASTS---------NEMKQYMHNQFPKL---SEKNLEKMEQLYPLMPPLPLHAPYFPSVALAYGEAT 406
                 **********77*******************943332.........22223334444444...789999999999999999999*************** PP

                 THHHHHHHHHHHH.......HTT-SEEEEEEE--STTSSSTTTGSSBTTTTHHHHTTGGGTSGCSS-HHHHHHHHHHHHHHHHHHHHSSTTS....... CS
  COesterase 390 fkapvlrtaklha.......srgspvYlYsfdyrnssskkpkwmgvvhgdeleyvfglpllekeeftkedeklsrkmmtywtnFaktgnPnk....... 474
                 f++p l + ++         ++  p+++Y+++ +   +     +gv h  el+ +f+++  +++++++    +  ++ +yw nF+   +Pn+       
  KHJ34056.1 407 FTCPGLLISSAFFkyssdlgDSLVPIFHYHYNVQD-YDLIAVGKGVPHVFELQALFNTYDPKTSSYNTYNAPIVPQVRNYWINFVMRNDPNHiinntse 504
                 ****999999988667777777777******9988.44445679***************9999999999*****************************9 PP

                 .TTSS----B......TTTBEEEEESSSSSEEEES..TTHHHHHHH CS
  COesterase 475 .eeeekWpky.....tkeeekylkinlkpkrvkkk..lkeeevafw 512
                  +++  W +      + + e+ l i+++++++++    + e+++fw
  KHJ34056.1 505 gQTKIIWTPWgdmseNLNIEQRLLIQTNATQMENVslKELERCQFW 550
                 9888888887554655555666667777766655311334566666 PP

>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.0     3e-08   0.00018      49      95 ..     188     234 ..     183     265 .. 0.79

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 3e-08
                    HHHHHHHHHHHHHTHHHHTETTCEEEEEEETHHHHHHHHHHHHHHHT CS
  Abhydrolase_3  49 vedalaalrwlaeqawelgadpsrivlaGdSaGGnlaaavalrarde 95 
                    + d  +al+w+++   ++g dp r+v+ GdSaG+  +a  +++   +
     KHJ34056.1 188 ILDQRKALKWVQKYITKFGGDPGRVVIHGDSAGAGSVAMHLIAYNGR 234
                    668899********99*****************76555544444444 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   4.6e-06     0.027      29     107 ..     175     257 ..     158     279 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.6e-06
                   HCHHHHTTSGGGGHHHHHHHHHHHHHHHHTTS--GGGEEEEEETHHHHHHHH...HHH.H-GGG-SEEEEESE---CCCHHCS CS
  Peptidase_S9  29 GeafhdagkrklgqnefdDfiaaaealakegyvdserlaitGgSyGGyltga...aln.qrpdlFkaavaevpvvdvlrydsd 107
                   +e+ +++g+ + g  + +  ++++++ ++++  d+ r++i+G S+G   +++   a n ++++lF++a+ e  ++   r   d
    KHJ34056.1 175 SEKIRQDGSLNVGILDQRKALKWVQKYITKFGGDPGRVVIHGDSAGAGSVAMhliAYNgRNDSLFSGAILESVFFPTQRKVID 257
                   678888999999999999999*************************8666551115566888999999999888777766666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (559 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3985.45
//
Query:       KHJ34057.1  [L=589]
Description: hypothetical protein EV44_g5774 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (589 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       928  (0.0517597); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.15u 0.33s 00:00:01.48 Elapsed: 00:00:00.52
# Mc/sec: 3438.17
//
Query:       KHJ34058.1  [L=426]
Description: putative sn-diacylglycerol cholinephosphotransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-14   53.9   0.2    2.2e-14   53.9   0.2    3.2  2  CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase


Domain annotation for each model (and alignments):
>> CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.2   1.2e-18   2.2e-14       2      66 .]      55     129 ..      54     129 .. 0.84
   2 ?   -9.0  10.8         1   1.8e+04       7       7 ..     242     242 ..     148     391 .. 0.61

  Alignments for each domain:
  == domain 1  score: 53.9 bits;  conditional E-value: 1.2e-18
                      -HHHHHHHHHHHHHHHHHGGGS-H.............HHHHHHHHHHHHHTTHHHHHHHHTT---HHHHHHHHHHH CS
  CDP-OH_P_transf   2 lPnaiTllrlllsvlailllltyyp...........lvlailllliasltDalDGklARrlnqvstlGkllDslaD 66 
                      +Pn++Tl+++ +++l +++l+++ p           + +a+ +++++++ D++DGk+ARr++++s lG+l+D+++D
       KHJ34058.1  55 APNMVTLIGFGFIILQVIILVIFIPdlvgpgpswvyYSFAFGIWMYSTM-DNIDGKQARRTGTSSGLGELFDHGID 129
                      8***********9999988877777999999988765666666666666.*************777********99 PP

  == domain 2  score: -9.0 bits;  conditional E-value: 1
                      H CS
  CDP-OH_P_transf   7 T 7  
                      T
       KHJ34058.1 242 T 242
                      0 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       757  (0.0422221); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 2975.92
//
Query:       KHJ34059.1  [L=314]
Description: putative 3-oxo-5-alpha-steroid 4-dehydrogenase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-55  187.8   0.5    2.6e-55  187.5   0.5    1.1  1  DUF1295     Protein of unknown function (DUF1295)
    2.1e-06   27.8   4.1    1.6e-05   24.9   1.0    3.1  2  Steroid_dh  3-oxo-5-alpha-steroid 4-dehydrogenase
    8.5e-05   22.9   0.0    8.5e-05   22.9   0.0    2.3  3  ICMT        Isoprenylcysteine carboxyl methyltransferase (ICM
  ------ inclusion threshold ------
      0.015   15.7   3.7      0.035   14.5   0.1    3.0  3  PEMT        Phospholipid methyltransferase


Domain annotation for each model (and alignments):
>> DUF1295  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.5   0.5   5.9e-59   2.6e-55       1     233 [.      26     267 ..      26     272 .. 0.89

  Alignments for each domain:
  == domain 1  score: 187.5 bits;  conditional E-value: 5.9e-59
     DUF1295   1 lflislltkssslvDvlwgvlfvilavltlllseaaklrrllvllLvvlWglRLalhllrrtlkkgeDkryeelrkelgktiallsllvvfvlQavlly 99 
                 +f i+   k ++l+D+++g++f++la+ltl+ls + + r+++  l+ ++W+lRL+ +ll r+lk+g+D r+++ r+++        +l ++++Q+++++
  KHJ34059.1  26 FFSIAFSFKFDKLTDFAGGTNFALLAILTLFLSGNPNARQVVTSLFLIIWALRLSGFLLFRILKTGKDDRFDDKRDKF------FPFLGFWIFQMLWVW 118
                 689999**********************************************************************88......36999********** PP

     DUF1295 100 lvalpvllaaaskeeq....al.kaldviglalwlvgivlealaDqQlsafkkdpankgkvldsGLwrysRHPNYfgealiWwglflialea....... 186
                 +v+lpv++ +++  ++    ++ +  dvig+ l+l+g+ le ++D  + +f+++ + k  ++++G++ +sRHPNYfge+l+ +++f+ia++        
  KHJ34059.1 119 IVSLPVTILNSPAVTKypqsKFgNSQDVIGVLLFLLGFSLESISDIIKYRFRSSTSDKSLFCNKGIFAWSRHPNYFGEILLQFSIFMIAVSPaasgdik 217
                 **********9988777777786789***************************************************************9643334433 PP

     DUF1295 187 ..leglealaiagpllltlllvfvsgipllEkkalkkyk.dkeeyreYqk 233
                   ++++++++i+gp++lt ll+fvsg+ l E+ + k+++ ++++++eY++
  KHJ34059.1 218 gqAYKALYATIVGPIFLTTLLMFVSGMNLAERPTAKRRYdKRQNWEEYAR 267
                 33567889***********************9776655414555666543 PP

>> Steroid_dh  3-oxo-5-alpha-steroid 4-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.19   8.5e+02      17      53 ..      79     114 ..      64     135 .. 0.57
   2 !   24.9   1.0   3.6e-09   1.6e-05      39     104 ..     142     208 ..     127     279 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.19
  Steroid_dh  17 lnGllqarylsyyqpy.aedylkkdrlllgivlfvlgm 53 
                 l+G+l +r l+  +++  +d   k+  +lg   +++ m
  KHJ34059.1  79 LSGFLLFRILKTGKDDrFDDKRDKFFPFLG--FWIFQM 114
                 567777776666666433333332333333..333333 PP

  == domain 2  score: 24.9 bits;  conditional E-value: 3.6e-09
  Steroid_dh  39 kdrlllgivlfvlgmliniksdiiLrelrkegetkykiprgglFelvsapnyfgEil.ewigyalvt 104
                 + + ++g++lf+lg+  +  sdii  + r   + k   +  g+F +   pnyfgEil ++  +++++
  KHJ34059.1 142 NSQDVIGVLLFLLGFSLESISDIIKYRFRSSTSDKSLFCNKGIFAWSRHPNYFGEILlQFSIFMIAV 208
                 56779**************************************************972455555443 PP

>> ICMT  Isoprenylcysteine carboxyl methyltransferase (ICMT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.4         3   1.3e+04      68      82 ..      13      27 ..       4      29 .. 0.54
   2 ?   -2.9   0.1       2.2   9.9e+03      55      75 ..      50      70 ..      46      80 .. 0.51
   3 !   22.9   0.0   1.9e-08   8.5e-05      30      66 ..     174     210 ..     157     217 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 3
        ICMT 68 ltalvllalvalllf 82
                +++l++++++ l++f
  KHJ34059.1 13 TITLLITIFYQLFFF 27
                345555556655555 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.2
        ICMT 55 lelatllLlcnakltalvlla 75
                l++ tl L  n+    +v ++
  KHJ34059.1 50 LAILTLFLSGNPNARQVVTSL 70
                566666666666443333333 PP

  == domain 3  score: 22.9 bits;  conditional E-value: 1.9e-08
        ICMT  30 lpdhklvksglykylrHPnYllfvilelatllLlcna 66 
                 +++    ++g++++ rHPnY++ ++l+ +  ++++++
  KHJ34059.1 174 SDKSLFCNKGIFAWSRHPNYFGEILLQFSIFMIAVSP 210
                 566667899*****************99999999887 PP

>> PEMT  Phospholipid methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.3       3.5   1.6e+04      78      89 ..      14      25 ..       9      31 .. 0.50
   2 ?   14.5   0.1   7.9e-06     0.035       6      74 ..     148     211 ..     144     214 .. 0.68
   3 ?    0.7   0.0      0.16     7e+02      77     105 ..     233     259 ..     221     260 .. 0.66

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 3.5
        PEMT 78 lallvllvylia 89
                ++ll++++y+++
  KHJ34059.1 14 ITLLITIFYQLF 25
                344444444333 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 7.9e-06
        PEMT   6 GlllialglllvlssiealgefgtfygdfFlelmdklvtsGiYrylnnPeyvgstlgflGlaLitgsaa 74 
                 G+ll++lg+ l  +si+++ +      +   ++++   ++Gi+ ++++P y+g +l  + + +i  s+a
  KHJ34059.1 148 GVLLFLLGFSL--ESISDIIKYRFRSST---SDKSLFCNKGIFAWSRHPNYFGEILLQFSIFMIAVSPA 211
                 66666666544..333333222222222...34556789**********************99998887 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.16
        PEMT  77 llallvllvylialkfvEephlakiYgkr 105
                 +l+   ll++   +++ E+p  +++Y kr
  KHJ34059.1 233 FLT--TLLMFVSGMNLAERPTAKRRYDKR 259
                 333..3444445566679**999999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       642  (0.0358079); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2362.15
//
Query:       KHJ34060.1  [L=285]
Description: hypothetical protein EV44_g2434 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-06   27.3   0.3    7.9e-06   25.7   0.1    2.0  2  Chromo    Chromo (CHRromatin Organisation MOdifier) domain


Domain annotation for each model (and alignments):
>> Chromo  Chromo (CHRromatin Organisation MOdifier) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.32   5.7e+03       1      12 [.     112     123 ..     112     127 .. 0.82
   2 !   25.7   0.1   4.4e-10   7.9e-06       3      53 ..     181     229 ..     179     230 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.32
                 EEEEEEEEEEEE CS
      Chromo   1 yeVerIidhrtd 12 
                 y++ ++id+ t+
  KHJ34060.1 112 YQITKVIDSHTV 123
                 78999**99876 PP

  == domain 2  score: 25.7 bits;  conditional E-value: 4.4e-10
                 EEEEEEEEEETTEEC..EEEEEEETTSTGGGTEEEEGGGCSSHSHHHHHHHHH CS
      Chromo   3 VerIidhrtdkdgle..leYlVKWkglpysentWEpeenlekcfqelideFkk 53 
                 Ve+I+  + +k g++  +  lVKWkg+   e tWEp++nle+   e++d F++
  KHJ34060.1 181 VEKILRAENKKIGRGyrQSLLVKWKGFA--EPTWEPRQNLEDT--EALDVFES 229
                 9****999999999999**********7..67*********99..67998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1007  (0.056166); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2074.72
//
Query:       KHJ34061.1  [L=265]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.6    7.9   6.6         18    5.3   0.2    3.1  3  HscB_4_cys  Co-chaperone HscB tetracysteine metal binding mot


Domain annotation for each model (and alignments):
>> HscB_4_cys  Co-chaperone HscB tetracysteine metal binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1     0.046   8.2e+02      19      23 ..     153     157 ..     144     158 .. 0.82
   2 ?    5.3   0.2     0.001        18       1       9 [.     170     178 ..     170     183 .. 0.85
   3 ?    4.2   0.3    0.0021        37       2      10 ..     190     198 ..     190     203 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.046
                 B-TTT CS
  HscB_4_cys  19 FCpqC 23 
                 FC +C
  KHJ34061.1 153 FCKRC 157
                 ***** PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.001
                 -B-SSS--B CS
  HscB_4_cys   1 PrCWnCGgp 9  
                 P+C nCG+ 
  KHJ34061.1 170 PSCGNCGST 178
                 9******96 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.0021
                 B-SSS--B- CS
  HscB_4_cys   2 rCWnCGgpg 10 
                 +C nCGgp+
  KHJ34061.1 190 KCRNCGGPR 198
                 599****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       858  (0.0478554); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2016.07
//
Query:       KHJ34062.1  [L=1217]
Description: putative mif4g domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-58  196.0   0.5    4.1e-30  105.0   0.0    3.8  4  MIF4G     MIF4G domain
      4e-40  137.7   6.3      4e-40  137.7   6.3    2.2  2  Upf2      Up-frameshift suppressor 2
  ------ inclusion threshold ------
        1.7    8.7   5.2       0.79    9.8   0.4    2.5  2  DUF1896   Domain of unknown function (DUF1896)
        4.4    7.6   7.1        3.3    8.0   0.1    3.0  3  TCTP      Translationally controlled tumour protein


Domain annotation for each model (and alignments):
>> MIF4G  MIF4G domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0   0.00059       2.7       5     123 ..      42     166 ..      35     175 .. 0.80
   2 ?   -3.8   0.0       1.8   8.2e+03     121     140 ..     205     224 ..     203     237 .. 0.76
   3 !   78.9   0.1   8.6e-26   3.9e-22      28     209 ..     498     665 ..     483     668 .. 0.91
   4 !  105.0   0.0   9.2e-34   4.1e-30       5     212 .]     687     890 ..     683     890 .. 0.94

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00059
                 HHHHHCHTTTTHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHH..HCGGGHHHHHHHHHHHHHHSH.HHHHHHHHHHHHHHHHHHC......-S-HHHH CS
       MIF4G   5 kgilnklskenfevlikqllklamdddknelkevielifekav..eepsfsplyarlcgklnsrfq.qnFrikllnklqeefekry......elenele 94 
                 k+++  +s+  ++  + +++ l+      +l+e+i+ ++e  +  ++p  + + ++++++l++rf   +F+++l+  + + +            +++  
  KHJ34062.1  42 KRLRTAISPATLSIFLHEIRTLILHK---YLSEIISACYEGLCklKSPGEIEAGIEIVSALHQRFGpVEFTEYLGWLVGKGLATPDksmiknLPIEARD 137
                 55666666777777777777777776...888888888886551155699***************9999999999999999988778889865567788 PP

                 HHHHHHHHHHHHHHHHHHHHHHTTSSEHH CS
       MIF4G  95 enedgnrrrrlglvrflgelfklkmltsk 123
                 ++e+  ++r++ l+r  +el+  ++l + 
  KHJ34062.1 138 REEKERSSRQRVLLRVVTELWLTGVLRTL 166
                 8888899999************9999875 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 1.8
                 EHHHHHHHHHHHHHGGCCCC CS
       MIF4G 121 tskilldclkellssltket 140
                 t+ + l++lk+lls+ ++ t
  KHJ34062.1 205 TEPFPLEVLKDLLSHDKEHT 224
                 5678899********98855 PP

  == domain 3  score: 78.9 bits;  conditional E-value: 8.6e-26
                 HCS.....CHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC-S-HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSE CS
       MIF4G  28 mdd.....dknelkevielifekaveepsfsplyarlcgklnsrfqqnFrikllnklqeefekryeleneleenedgnrrrrlglvrflgelfklkmlt 121
                   d      k++++ +++ ++e++ ++++ +p y+rl+++l ++++ +++++l+++l +ef++      +  +++++  + rl ++r+l el k+++++
  KHJ34062.1 498 AIDfcflnSKASRNRLLRAVQEIPKGRSDLLPFYSRLVATLGKYMP-DITKGLVDHLDHEFRS-----LQRRKEKEFLGQARLINIRYLAELTKFGVVP 590
                 33344444789***********************************.****************.....689999999999******************* PP

                 HHHHHHHHHHHHHGGCCCCSCCHSCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHCSSSSHHHHHHHHHHHHHH CS
       MIF4G 122 skilldclkellssltketaddppqdleeieilltllttigktlennekakkeldqffkriqkiledatrqelssrirfmlkdlielk 209
                 +++++ clk  l+++ +          ++iei+++ll+++g++l +n ++++++  f++ + +++     q++  + r+++++ i+++
  KHJ34062.1 591 EHVIFYCLKVGLDDFSR----------MNIEIICSLLENCGQYLLRNLETSPRMISFLEILKRKKAV---QHIGQQERMLIENAIYYV 665
                 *****************..........****************************************...9**********9999875 PP

  == domain 4  score: 105.0 bits;  conditional E-value: 9.2e-34
                 HHHHHCHTTTTHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHH.CGGGHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC-S-HHHHHHHHHHHH CS
       MIF4G   5 kgilnklskenfevlikqllklamdddknelkevielifekave.epsfsplyarlcgklnsrfqqnFrikllnklqeefekryeleneleenedgnrr 102
                 k+i   + + n+ +++k +++l++++  +e  +++e if+k+ + ++ +++l+a l+++l  ++q +F++ ++++l+e +        +le+n+ ++++
  KHJ34062.1 687 KLIYLDMNSRNYAKILKHIRRLHWEE--SEVVTILEKIFSKPGKvKYGNIHLLAILASTLFRYHQ-DFVTTIIDNLLEYIVL------GLEQNDFKFNQ 776
                 5555667799***************9..9*************76266******************.****************......*********** PP

                 HHHHHHHHHHHHHHTTSSEHHHHHHHHHHHHHGGCCCCSC........CHSCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHCSS CS
       MIF4G 103 rrlglvrflgelfklkmltskilldclkellssltketad........dppqdleeieilltllttigktlennekakkeldqffkriqkiledatrqe 193
                 rrl+ v++lgel+++ m++  +++d+l++++ +++    +        d p+d ++i++++t+l+t+g  ++ +  + k+ld f++ +q ++  +  + 
  KHJ34062.1 777 RRLAEVKYLGELYNFRMVDHPVIFDTLYRIMTFGHGGP-PipgkltpyDMPDDFFRIRLIATILETCGVFFN-RGASGKKLDYFLSFLQYYIYTK--DP 871
                 ************************************44.369******************************.*********************8..** PP

                 SSHHHHHHHHHHHHHHHTT CS
       MIF4G 194 lssrirfmlkdlielkknk 212
                 l+++i+f ++dl++l +++
  KHJ34062.1 872 LPMDIEFIVQDLFALTRPN 890
                 **************98875 PP

>> Upf2  Up-frameshift suppressor 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0         4   1.8e+04     105     123 ..     444     462 ..     415     465 .. 0.60
   2 !  137.7   6.3     9e-44     4e-40       2     136 .]     975    1101 ..     973    1101 .. 0.86

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 4
        Upf2 105 evPsdsslaqstreqeeae 123
                 + P++++la+  r+ e +e
  KHJ34062.1 444 KKPESNDLAVDSRSTEIKE 462
                 3466666777666666655 PP

  == domain 2  score: 137.7 bits;  conditional E-value: 9e-44
        Upf2    2 eeeevvvrrk..evdpeeeeeFerelakmmaeslesrknerkkapqldvplPmnvkkkkkkaeesesssekaaeeaeeepeaekskkvaFtLLtkkg 96  
                  eee++vv+r+    dpe+e++Fere+akmm+eslesrk+erk+  ++dvplPm++k   +       ++++   +++ ++++++ +++ F+LLtk+g
  KHJ34062.1  975 EEEDIVVTRQedVFDPEDEADFEREYAKMMSESLESRKHERKS--AFDVPLPMKRK---EI-----VNNNDLWINDSISNKNSPAGTMVFSLLTKRG 1061
                  6777888888788899**************************5..68*****9995...22.....2223344445555666777************ PP

        Upf2   97 nKqqtktlevPsdsslaqstreqeeaekeEkeriKrlvLn 136 
                  n+qqt+t+++Psds+la+++++q++ae+eE++riK+lvLn
  KHJ34062.1 1062 NRQQTRTVALPSDSTLAIAMKSQQQAEREEQQRIKNLVLN 1101
                  ***************************************8 PP

>> DUF1896  Domain of unknown function (DUF1896)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.4   0.00018      0.79       9      45 ..     296     332 ..     291     353 .. 0.91
   2 ?    0.1   0.5      0.18     8e+02       4      30 ..     853     878 ..     850     922 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00018
                 HHHHHHHHHHHH-GGGTT-HHHHHHHHHHHHHHHHHH CS
     DUF1896   9 yrlkLreyLkeshpekaedkefikeRadeAaeayeea 45 
                 +r  Lr+y+ke + +  +d++ i + a++ aeay+++
  KHJ34062.1 296 FRNVLRRYFKELKTHLIRDQKAISKQAQKDAEAYVKS 332
                 999*******************************987 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.18
                 HHHHHHHHHHHHHHHHH-GGGTT-HHH CS
     DUF1896   4 kelsYyrlkLreyLkeshpekaedkef 30 
                 k+l+Y+  +L+ y+ ++ p  + d ef
  KHJ34062.1 853 KKLDYFLSFLQYYIYTKDPLPM-DIEF 878
                 7899999999999988877443.3333 PP

>> TCTP  Translationally controlled tumour protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.1   0.00073       3.3      79     122 ..     290     332 ..     214     341 .. 0.74
   2 ?   -2.8   0.1       1.6   7.3e+03      37      54 ..     432     450 ..     427     465 .. 0.71
   3 ?    2.6   0.4     0.034   1.5e+02      61     127 ..     970    1034 ..     899    1071 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00073
                 ECCHHHHHHHHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHH CS
        TCTP  79 tsfdkksykaylkdYmkkvkkkleekkpeevkeFkkgaqeavkk 122
                 ++  ++ + + l+ Y+k++k +l  +++   k+ +k+a+++vk+
  KHJ34062.1 290 LE-IQELFRNVLRRYFKELKTHLIRDQKAISKQAQKDAEAYVKS 332
                 33.4678999********************************95 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.6
                 EEETTBST..TSSS--SSS CS
        TCTP  37 tkkegnvd.liganasaee 54 
                 +kk++nvd lig++++ ++
  KHJ34062.1 432 KKKKNNVDeLIGKKPESND 450
                 6788899999999998763 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.034
                  CCCECCEEHHHHCCTEEEECCHHHHHHHHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHHHCTCC CS
        TCTP   61 ddevekvndivdnfrLqetsfdkksykaylkdYmkkvkkkleekkpeevkeFkkgaqeavkkilanf 127 
                   ++  +  div +   qe  fd ++   + ++Y k + + le++k e+ ++F   ++   k+i++n 
  KHJ34062.1  970 HSTDSEEEDIVVTR--QEDVFDPEDEADFEREYAKMMSESLESRKHERKSAFDVPLPMKRKEIVNNN 1034
                  34444555666443..577788888888999*********************999999888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       898  (0.0500865); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.78u 0.25s 00:00:01.03 Elapsed: 00:00:00.40
# Mc/sec: 9036.75
//
Query:       KHJ34063.1  [L=811]
Description: putative class vii chitin synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.7e-23   81.3   3.6    5.7e-23   81.3   3.6    2.6  3  Chitin_synth_2   Chitin synthase
    3.7e-16   59.6   4.2    3.7e-16   59.6   4.2    2.5  2  Glyco_trans_2_3  Glycosyl transferase family group 2
    1.4e-11   44.7   0.0    3.1e-11   43.6   0.0    1.6  1  Glyco_tranf_2_3  Glycosyltransferase like family 2
     0.0078   16.0   0.2        5.3    6.8   0.0    2.5  2  Glycos_transf_2  Glycosyl transferase family 2


Domain annotation for each model (and alignments):
>> Chitin_synth_2  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.8   4.9         4   1.8e+04     430     441 ..      55      65 ..      12     107 .. 0.43
   2 !    8.1   0.0   0.00019      0.87      12      63 ..     130     181 ..     119     186 .. 0.76
   3 !   81.3   3.6   1.3e-26   5.7e-23     204     503 ..     256     547 ..     236     572 .. 0.82

  Alignments for each domain:
  == domain 1  score: -7.8 bits;  conditional E-value: 4
  Chitin_synth_2 430 vpviplvllaiv 441
                     v+v++l++ ai+
      KHJ34063.1  55 VKVLALIV-AII 65 
                     22222222.222 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00019
  Chitin_synth_2  12 lqlidkrslefqlkfticlvtaysegeeglrttldslastdyddkrklllvv 63 
                     ++ i++   e++   +++++++y e+ + l t+++s+   dy+ +   +++ 
      KHJ34063.1 130 TKRIKEVLDEHSAPKVVIVMPCYKEEPDVLVTAINSVVDCDYPPSCIHVFLS 181
                     5555555556666778999***********************9886666655 PP

  == domain 3  score: 81.3 bits;  conditional E-value: 1.3e-26
  Chitin_synth_2 204 ivlmvdadtkvapdsltrlvaalv....kdpeilglcGetkiankkeswvtaiqvfeyyishhlskafesvfGsvtclPGcfslyrikaakgadg 294
                      +l +d+d  +   +l+++v  +     +   +l++ G  + + kk+s +t++q  ey       ++ es  G+vtclPG +++ r  a +   +
      KHJ34063.1 256 FILFIDSDCILDRVCLQNFVYDMElspgNTRDMLAMTGVITSTTKKHSLITLLQDMEYVHGQLFERTVESGCGAVTCLPGALTMLRFSAFRRMAK 350
                     5899999999999999999999973232445799*******************************************************999444 PP

  Chitin_synth_2 295 kwvPilvspeiveeysenvvdtlhkknllllGedrylttlllk.tfpkrktvfvpqakcktvaPdtfkvllsqrrrwinstvhnllelvlvrdlc 388
                          ++++        ++ + l      +lGedr+lt l++    ++++  +  +a ckt a  t++ l+ qrrrw    + n  e+ +++d+ 
      KHJ34063.1 351 ---YYFADK-------AEQCEDLFDYGKCHLGEDRWLTHLFMIgAKKRYQIQMCTSAFCKTEAVQTYTTLVKQRRRWFLGFITN--EVCMLTDIR 433
                     ...334433.......3456778889999*********996650556667778899**************************99..778888887 PP

  Chitin_synth_2 389 GtfcfsmrfvvfieligtvvlPvaiaftlylivasilksklvpviplvllaivlGlpailivltarkl.eyvawll.vyllalPifnfvlPlyaf 481
                         +    +v + ++   +   a++f ++l+ ++ ++   v+ +p+ +++i lGl+ ++++    kl  y +wl  + +l  P fn+   +y  
      KHJ34063.1 434 IWKRYP--ILVLVRFMQNTIRTTALLFFIMLVAIASTS-MRVKDLPVGFIGISLGLNWLMMIYFGFKLkRYKVWLYpLMFLINPFFNYWYMVYGI 525
                     665554..577788889999999999999888777766.88999*************99998877666258888853556678************ PP

  Chitin_synth_2 482 whlddfswGetrvveGekkkka 503
                     +     +wG  r  +G+   ++
      KHJ34063.1 526 FTSGQRTWGGPRADAGQADANT 547
                     ************9999876443 PP

>> Glyco_trans_2_3  Glycosyl transferase family group 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -9.0  10.2         4   1.8e+04     154     191 ..      70     113 ..      21     121 .. 0.51
   2 !   59.6   4.2   8.2e-20   3.7e-16       2     193 ..     257     464 ..     256     523 .. 0.75

  Alignments for each domain:
  == domain 1  score: -9.0 bits;  conditional E-value: 4
  Glyco_trans_2_3 154 rllgylgsllwsalplhlall.llfslla.....lalvllllll 191
                      rl+ ++  + + +lp h++ + +l+ ++      ++ +++ll++
       KHJ34063.1  70 RLIFLPIMITTLPLPTHITQYfPLQLVSFlqwfgFWSFAVLLTI 113
                      33333333333444444432202222111222222222233333 PP

  == domain 2  score: 59.6 bits;  conditional E-value: 8.2e-20
  Glyco_trans_2_3   2 illlDaDtvlppdclreiaaela.sp....evaivqgpvlvm.nvanwleelaalffaedhgkdilvrealgrvvpsvGsgaflrrsalqevg. 88 
                      il++D+D  l++ cl  +++ ++ sp    ++ +++g ++ +  ++++++ l+++++    ++ + v +++g v+ ++G+ ++lr sa+++++ 
       KHJ34063.1 257 ILFIDSDCILDRVCLQNFVYDMElSPgntrDMLAMTGVITSTtKKHSLITLLQDMEYVHGQLFERTVESGCGAVTCLPGALTMLRFSAFRRMAk 350
                      9**********************8988866666788888886699*********************************************9999 PP

  Glyco_trans_2_3  89 ............gwdgdessvsEDfdmglrl...qrkGyrvrfvpeslvkekspltlraalrQrkRwayGc...eleklillvrllgylgsl.l 163
                                   +d    +++ED  +       ++k y++ +++++++k++   t+ + ++Qr+Rw++G    e          + +l  + +
       KHJ34063.1 351 yyfadkaeqcedLFDYGKCHLGEDRWLTHLFmigAKKRYQIQMCTSAFCKTEAVQTYTTLVKQRRRWFLGFitnE----------VCMLTDIrI 434
                      9988888888888887778*****98888774445888********************************64431..........333222223 PP

  Glyco_trans_2_3 164 wsalplhlallllfsllalalvllllllla 193
                      w+ +p+++++ ++++ +++ ++l++++l+a
       KHJ34063.1 435 WKRYPILVLVRFMQNTIRTTALLFFIMLVA 464
                      444444444444444333333333333332 PP

>> Glyco_tranf_2_3  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.6   0.0   6.8e-15   3.1e-11       1     229 [.     143     419 ..     142     420 .. 0.76

  Alignments for each domain:
  == domain 1  score: 43.6 bits;  conditional E-value: 6.8e-15
  Glyco_tranf_2_3   1 prdlavlVptfneed.vlgevlesllaqeypr..vevvvvv..desdaetlevaeelaaalp......dvrvrvvvn......arnlgstgksr 77 
                      p  + ++ p+++ee+ vl+  ++s++ ++yp+  ++v++    d++d+  l+++e l  +l+         ++v  +      +r +  +gk++
       KHJ34063.1 143 PK-VVIVMPCYKEEPdVLVTAINSVVDCDYPPscIHVFLSFdgDQEDELYLNTIEKLGVPLSldsypkS--IDVTYRsaritvSRFPH-GGKRQ 232
                      44.8999*****99879999**********776999999987777887778888888776553333222..33222211111112221.34555 PP

  Glyco_tranf_2_3  78 alnealravk...sd........lvllvDdDtvvePdtlkrllqff.....ltpkvgavgtpvfll.nrstlvsalgalefaerhlrflaarra 154
                        + +++ ++   ++        ++l++D+D++++   l+ ++  +     +t+++ a+++   +     +l++ l+++e+ + +l ++ +   
       KHJ34063.1 233 CQKATFKLIDrvyTEylkrndnlFILFIDSDCILDRVCLQNFVYDMelspgNTRDMLAMTGVITSTtKKHSLITLLQDMEYVHGQLFERTVESG 326
                      55555554444441155566788*************999999887774466666999999888665267799********99999966666655 PP

  Glyco_tranf_2_3 155 lg.vltlnGsgslirrevlkele.............gldp.lflltdDyelglrlrr...agfrtayvpgaavrevfpsslkayikqrnRwvy 229
                       g v++l G++++ r + +++               ++d  + +l++D  l+  ++     +++++++  a++ ++  ++ + ++kqr+Rw  
       KHJ34063.1 327 CGaVTCLPGALTMLRFSAFRRMAkyyfadkaeqcedLFDYgKCHLGEDRWLTHLFMIgakKRYQIQMCTSAFCKTEAVQTYTTLVKQRRRWFL 419
                      56479999***************************9899999******977766665566*******************************76 PP

>> Glycos_transf_2  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.1    0.0014       6.2       2      40 ..     147     188 ..     146     198 .. 0.83
   2 !    6.8   0.0    0.0012       5.3      82     106 ..     256     280 ..     243     348 .. 0.59

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0014
                      EEEEESS-.TTTHHHHHHHHHHH.GGCCEEEEEEEEES-.SS CS
  Glycos_transf_2   2 vviptyNe.ektlletlesllaq.dpypdfeiivvDDgS.tD 40 
                      +v+p+y e ++ l  +++s+++  +p++ +++++  Dg+ +D
       KHJ34063.1 147 IVMPCYKEePDVLVTAINSVVDCdYPPSCIHVFLSFDGDqED 188
                      8********************997777777777777776555 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0012
                      EEEEEESSEEE-TTHHHHHHHHHHH CS
  Glycos_transf_2  82 yilflDaDdepdpdwleklvealek 106
                      +ilf+D+D++ d+ +l+ +v  +e 
       KHJ34063.1 256 FILFIDSDCILDRVCLQNFVYDMEL 280
                      9******************998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (811 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       950  (0.0529868); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 5688.40
//
Query:       KHJ34064.1  [L=466]
Description: putative acyl- desaturase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.5e-18   66.4  15.3    3.5e-18   66.4  15.3    1.8  2  FA_desaturase  Fatty acid desaturase
    3.5e-16   59.1   0.0    8.4e-16   57.9   0.0    1.7  1  Cyt-b5         Cytochrome b5-like Heme/Steroid binding domain


Domain annotation for each model (and alignments):
>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   1.4     0.037   3.4e+02     129     172 ..      39      81 ..      22      86 .. 0.63
   2 !   66.4  15.3   3.9e-22   3.5e-18      10     237 ..      78     289 ..      69     304 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.037
  FA_desaturase 129 ksrrrkwrllawlllllawlglwlalllllglalllwlvpllll 172
                    +++  +w  +++ ++l+++ ++++++  l++  +  w + + ++
     KHJ34064.1  39 WYKHINWLNVTLIVALPIYGLMAACWTPLHWKTA-TWSITYYFM 81 
                    3344448888888888877666666666554433.888887776 PP

  == domain 2  score: 66.4 bits;  conditional E-value: 3.9e-22
  FA_desaturase  10 lllglfllgitgslaHeaaHgalfkkrklnrwlndllgallglplgisysawrisHlrHHaytngpdeDpdlaplalsrfeglfryllrlllgllv 105
                    + +++  lgit+++++ +aH a++ + +l  +l +++    g +++ s+ +w ++H+ HH+y  ++d+Dp+      s ++gl + +++++ + ++
     KHJ34064.1  78 YYFMTG-LGITAGYHRLWAHSAYSASLPLKLFL-AAV---GGGAVQGSIRWWARDHRAHHRY-TDTDKDPY------SVRKGLLYSHIGWMILNQN 161
                    334444.88989*********999777777777.444...7999999***************.6666****......6799999999********* PP

  FA_desaturase 106 lgwllalvlglwlrrlarrrapsksrrrkwrllawlllllawlglwlalllllglall.lwlvplllllfllalvl.nyveHyggdwgerqvetsa 199
                    ++      ++ +  + + + +p+ ++++ ++++  ++++  +  +++  l+++ + +  +++  l+++++  a++  n + H+    g++++ +++
     KHJ34064.1 162 PK------KIGRSDISDLNDDPVVVWQH-RHYIKTVIFMGMIFPCLVTGLGWGDWMGGfIYAGILRIFFVQQATFCvNSLAHWL---GDQPFDDRN 247
                    **......33388888888888888888.6666666666666777777777777777645555555555555554478888864...555555555 PP

  FA_desaturase 200 sirsaswllnlltgnlnyHieHHlfP.....gvpwyrLpelhr 237
                    s r ++ + +l+t++ +yH+ HH fP     ++ w++++  ++
     KHJ34064.1 248 SPR-DHAITALVTLGEGYHNFHHEFPsdyrnAIEWHQYDPTKW 289
                    555.**********************************98874 PP

>> Cyt-b5  Cytochrome b5-like Heme/Steroid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.9   0.0   9.4e-20   8.4e-16       1      73 [.     343     416 ..     343     417 .. 0.95

  Alignments for each domain:
  == domain 1  score: 57.9 bits;  conditional E-value: 9.4e-20
                 EHHHHTTTECTTEEEEEETTEEEECTTTCCCSTTCSHHHHTTTTSBBHHHHHHTT..GGCHHHHHHHHGGEEEEE CS
      Cyt-b5   1 tleelskhngkndlwvairgkVYDvskflskhpGgesailkyaGkDateafksvv..hsekdaekllkkylvGkl 73 
                 ++e+ ++ +++++ ++a+ g ++Dv++f+++hpGg+++i++  GkD t++f+  v  hs++ a++ll +++vG++
  KHJ34064.1 343 SWEDYQAEAKNGRGLIAVAGVIHDVTDFIKDHPGGKALISSGIGKDSTAIFNGGVynHSNA-AHNLLSTMRVGVI 416
                 688999999999*******************************************999999.8**********87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (466 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       745  (0.0415528); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3360.19
//
Query:       KHJ34065.1  [L=274]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 2123.39
//
Query:       KHJ34066.1  [L=195]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       925  (0.0515924); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1420.85
//
Query:       KHJ34067.1  [L=381]
Description: putative alpha beta hydrolase fold-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0049   16.4   0.0      0.039   13.4   0.0    2.0  2  Peptidase_S9  Prolyl oligopeptidase family


Domain annotation for each model (and alignments):
>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0     0.022   3.9e+02      67     108 ..     197     237 ..     189     251 .. 0.81
   2 !   13.4   0.0   2.2e-06     0.039     133     191 ..     290     357 ..     275     375 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.022
                   EEEEETHHHHHHHHHHHH-GGG-SEEEEESE---CCCHHCST CS
  Peptidase_S9  67 aitGgSyGGyltgaalnqrpdlFkaavaevpvvdvlrydsdt 108
                    + G S GG  +  +l  + ++ ++++   ++ d l+ +sd 
    KHJ34067.1 197 LVIGISLGGHSAWQVLL-NEEKVSGGIVIIGCPDYLSLMSDR 237
                   689*******9999999.888888889999999999999985 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 2.2e-06
                   HH-CGGG--.---EEEEEEETT-SSS-THHHHHHHHHHH.......--S-S.EEEEEETTS-SSTTSS CS
  Peptidase_S9 133 pyspldnvk.aypplLlihGlaDdrvppaealklvaaLq.......kkgkn.vlllifpdegHgvgkp 191
                   +y+   ++k +++++L++ G+ D+ vp+  ++ +++ L+       + g+  ++ +++p+ gH + ++
    KHJ34067.1 290 KYRIILEKKlKNKHILVCSGEDDKLVPYGCSEPFLKFLEsasngwyNDGNFhLQNKTYPGVGHTCTDE 357
                   455555555689***************************999999655555778899******77633 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       380  (0.0211947); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2938.58
//
Query:       KHJ34068.1  [L=1779]
Description: putative phospholipase d1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-16   58.4   0.2    6.5e-08   32.4   0.2    2.9  2  PLDc      Phospholipase D Active site motif
    1.8e-11   44.1   0.0    3.4e-05   23.8   0.0    2.8  2  PLDc_2    PLD-like domain
    5.3e-06   26.4   3.3    3.5e-05   23.7   0.7    3.3  3  PX        PX domain


Domain annotation for each model (and alignments):
>> PLDc  Phospholipase D Active site motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.4   0.2   1.1e-11   6.5e-08       2      28 .]     910     936 ..     909     936 .. 0.95
   2 !   23.0   0.0     1e-08   6.1e-05       6      28 .]    1219    1241 ..    1214    1241 .. 0.92

  Alignments for each domain:
  == domain 1  score: 32.4 bits;  conditional E-value: 1.1e-11
                 TBEE---EEEETTTEEEEE---SSHHH CS
        PLDc   2 mgthHqKivivDdrvafvGgaNLcdgr 28 
                 ++ hH+Ki ivD++vafvGg +Lc gr
  KHJ34068.1 910 FYAHHEKICIVDHTVAFVGGIDLCFGR 936
                 689*********************997 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 1e-08
                  ---EEEETTTEEEEE---SSHHH CS
        PLDc    6 HqKivivDdrvafvGgaNLcdgr 28  
                  H+K +i Ddrva++G+aN++ ++
  KHJ34068.1 1219 HAKAIIADDRVALIGSANINERS 1241
                  ********************996 PP

>> PLDc_2  PLD-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   5.7e-07    0.0034      19      99 ..     839     930 ..     815     944 .. 0.73
   2 !   23.8   0.0   5.6e-09   3.4e-05      68     120 ..    1208    1258 ..    1087    1264 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 5.7e-07
      PLDc_2  19 f.....vsdreildallk.aakrgvkvrilldskkddagavdeaslkelkellleagvevrvfet......llgslHaKlylidgktvivGSs 99 
                 +     +s+++ ld+ll+ +a++gvk+ i++ + + +a+++ + ++ +++ l l+ ++ v+ +        ++   H+K++++d+++++vG+ 
  KHJ34068.1 839 MrrpaaISQKWRLDRLLQrKAREGVKIFIIIYR-NVEAAIPIDSEFTKYSMLDLHPNIFVQRSPNqfkknqFFYAHHEKICIVDHTVAFVGGI 930
                 1444445667779999887*************9.567888888888999888888888887765234334333888***************97 PP

  == domain 2  score: 23.8 bits;  conditional E-value: 5.6e-09
      PLDc_2   68 agvevrvfetllgslHaKlylidgktvivGSsNltkrgl..dlnlElnvviedke 120 
                  +++ v +  +    +HaK+++ d++++++GS+N+++r++   ++ E++ ++ d +
  KHJ34068.1 1208 KKILVTE--Q--LYIHAKAIIADDRVALIGSANINERSMlgMRDSECAAIVRDTD 1258
                  4444333..3..468************************7777778888888775 PP

>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.5   9.2e+03      46      81 ..     109     151 ..     108     159 .. 0.69
   2 !   23.7   0.7   5.9e-09   3.5e-05       8     112 ..     453     640 ..     448     641 .. 0.86
   3 ?   -1.5   0.0      0.41   2.5e+03      42      64 ..     978    1000 ..     976    1008 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.5
                 HHHHHHHHHHT........TSTSTSSSTSGSSSSSCTTSHHHHH CS
          PX  46 eLhskLlrkfp........rvkiPplPkkvlfgsvrkkdeefie 81 
                 +Lh++L ++          ++  P +P+  ++++ ++++e+f +
  KHJ34068.1 109 SLHDELAKTITtarksvqfMRLDPAAPEVISHVT-KSSNEDFDT 151
                 6888888888888888887777777777777776.555555544 PP

  == domain 2  score: 23.7 bits;  conditional E-value: 5.9e-09
                 EEEEEEE.....TTSSEEEEEEEEEETTS..SSEEEEEEEHHHHHHHHHHHHHHHT.............TSTSTSSSTSGSSSSS.............. CS
          PX   8 vlerets.....gskkhsyylyevelktg..akewtvkRrYsdFeeLhskLlrkfp.............rvkiPplPkkvlfgsv.............. 72 
                 v+e+++s      s++h ++ +  e+++g  + +w ++R+ +dF +Lh + + +               r k P +Pk      +              
  KHJ34068.1 453 VTESKPSvdesvDSERHLIFRIDLEYGSGlnRMKWVIHRSLRDFANLHIRYKLQGGsdkyiqlrsdidsRPKQPRFPK------Safpffrgvrglgds 545
                 44444444466688999999999999999*******************876666667799***666665555555555......344456899****** PP

                 ......................................................CTTSHHHHHHHHHHHHHHHHHHHTSCHHHH.SHHHHHHHHS CS
          PX  73 ......................................................rkkdeefiekrrkgLeeyLqrllnhpelrn.sevlteFLev 112
                                                                         + +   ek+r+ Le+yLq++++   +r  s+ l +FLe 
  KHJ34068.1 546 deddveaaqaddtvgegthsendnvkkkrgrflnnnsrrksstnifdtsstvhgVHQIRVYNEKQRRRLENYLQEMIRWLIFRAdSNRLCRFLEL 640
                 *****************************************************988889999*******************************96 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.41
                  HHHHHHHHHHHHHHTTSTSTSSS CS
          PX   42 sdFeeLhskLlrkfprvkiPplP 64  
                  +dF++L++   + ++r+kiP +P
  KHJ34068.1  978 QDFYQLNEPYAEMYDRSKIPRMP 1000
                  79*******************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1779 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       916  (0.0510904); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.96u 0.26s 00:00:01.22 Elapsed: 00:00:00.44
# Mc/sec: 12200.98
//
Query:       KHJ34069.1  [L=272]
Description: putative ubiquinone biosynthesis protein coq7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-70  236.1   0.2    2.9e-70  235.5   0.2    1.3  1  COQ7          Ubiquinone biosynthesis protein COQ7
      0.004   17.5   0.0      0.008   16.6   0.0    1.5  1  Rubrerythrin  Rubrerythrin
      0.008   16.3   0.0      0.014   15.6   0.0    1.4  1  DUF4760       Domain of unknown function (DUF4760)


Domain annotation for each model (and alignments):
>> COQ7  Ubiquinone biosynthesis protein COQ7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  235.5   0.2   4.9e-74   2.9e-70       2     172 .]      92     272 .]      91     272 .] 0.99

  Alignments for each domain:
  == domain 1  score: 235.5 bits;  conditional E-value: 4.9e-74
        COQ7   2 ldrllRvdhaGElgAvaiYkgqlavlakkdpelkpllkemleqEkeHlatfeellkerrvrpslllplwkvagfalGaltallGkeaamacteavEtvi 100
                 ++++lRv++aGEl+A+ iYk+q+  l + +p+l+pl+k+m++qE+ H++tf++l++++r+rp++++p+wk+a+ +lG++ta++G+e+amactea+Et+i
  KHJ34069.1  92 ISSALRVNQAGELAATIIYKAQTTPLVNAHPNLRPLIKHMYDQENGHFQTFNKLIARHRIRPTIMYPVWKLAAAFLGWGTAVMGRETAMACTEAIETEI 190
                 7899*********************************************************************************************** PP

        COQ7 101 geHYneqlreleelee..........eedkelleiikqfrddEleHldtAvendaekapaykllsaviklgcrvaiavaeri 172
                 g+HYn+q+rel +l +          +e++ l+++i+++rd+EleHld+A+enda++a++++ll+a+i++gcr+ai+v+er+
  KHJ34069.1 191 GNHYNSQVRELLRLASdlkeqgqelgPELETLITVIRRIRDEELEHLDHAIENDAQNAVPHDLLTAIIRAGCRGAIWVSERV 272
                 ************99889****************************************************************7 PP

>> Rubrerythrin  Rubrerythrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.3e-06     0.008       3     105 ..      96     196 ..      94     206 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.3e-06
                   HHHHHHHHHHHHHHHHHHHHCHHTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTHH.B.SSBBS-------TTGGHHHHHHHHHHHHHHHHHCH CS
  Rubrerythrin   3 LekAiagEssarrlYkelaekakegypqiaelFeelAeeEreHakilnklleklepelelevkekvreyaeakpkflttaknLeeaiegayaeeeem 99 
                   L  + agE  a+ +Yk+ +  + +  p+++ l++ + ++E  H + +nkl+   +      +   v++ a a   + t     e+a++  +a e+e+
    KHJ34069.1  96 LRVNQAGELAATIIYKAQTTPLVNAHPNLRPLIKHMYDQENGHFQTFNKLIARHRIRPT--IMYPVWKLAAAFLGWGTAVMGRETAMACTEAIETEI 190
                   677789*********************************************99777776..667777777777777777777777777777777777 PP

                   HHHHHH CS
  Rubrerythrin 100 yrfyee 105
                     +y+ 
    KHJ34069.1 191 GNHYNS 196
                   777765 PP

>> DUF4760  Domain of unknown function (DUF4760)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   2.3e-06     0.014      78     140 ..      90     153 ..      26     154 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2.3e-06
     DUF4760  78 EfvavgiesgildE...dmikelsvttvikawdlleplikelredsnndkiyqeFealaakWkknP 140
                 +f++ + + +  +E    +i++++ t +++a ++l plik++  ++n   ++q F +l a+ + +P
  KHJ34069.1  90 DFISSALRVNQAGElaaTIIYKAQTTPLVNAHPNLRPLIKHMYDQEN--GHFQTFNKLIARHRIRP 153
                 56655555444444333799*********************998776..68**********99877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1927.67
//
Query:       KHJ34070.1  [L=116]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.061   13.5   0.0        2.9    8.1   0.0    2.3  2  PYRIN     PAAD/DAPIN/Pyrin domain


Domain annotation for each model (and alignments):
>> PYRIN  PAAD/DAPIN/Pyrin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0   0.00016       2.9      41      69 ..       4      32 ..       3      37 .. 0.93
   2 ?    3.2   0.0    0.0054        97       7      22 ..      44      59 ..      39      83 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00016
                HHHHHHHHHHHHTCCCCHHHHHHHHHHTT CS
       PYRIN 41 rvdladlLvehygedaavevtlkvlekin 69
                +++lad++ ++ ++++a+   + +++ in
  KHJ34070.1  4 PQELADIIATRQRRERAWHSCIMICKTIN 32
                589*************************9 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.0054
                CCC-HHHHHHHHHHHH CS
       PYRIN  7 eeLseeelkkFKslLk 22
                +e+++ee + FK +L+
  KHJ34070.1 44 DEIEKEEVEAFKACLR 59
                5899*********994 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       686  (0.038262); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 843.45
//
Query:       KHJ34071.1  [L=526]
Description: putative cytochrome p450 monooxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-31  109.2   0.0    2.8e-31  108.8   0.0    1.1  1  p450      Cytochrome P450


Domain annotation for each model (and alignments):
>> p450  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.8   0.0   1.6e-35   2.8e-31     145     442 ..     171     492 ..     139     497 .. 0.82

  Alignments for each domain:
  == domain 1  score: 108.8 bits;  conditional E-value: 1.6e-35
                 HHHHHHHHHHHHHHSSHHHTTTSSHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCHCHC......... CS
        p450 145 lskaaldvigsilFgarfdlledeklselvkaveelssllskssvqllllfpllkylptkllrklkeavkklkdlldklieerretldsa......... 234
                 l++++  ++++i++g++++    +k+   +  v+  ++++++++  + + + ++  +++++ +++k+ +k+++  +  +     ++l ++         
  KHJ34071.1 171 LAEIVALISSRIFVGRPLS---RNKD-WVDVTVNYTFEVMKAKN-AIPKWPEWIISILGPHIKEVKSLHKFRERATVLMKPILDAQLAKTgneklfsid 264
                 5556666666666666644...2222.23445666666674444.677777788888888888888776666666655555555555555888999999 PP

                 SCSSCSHHHHHHHHCTTCTCTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHC.CTTT........T-HHHHCCT-HHH CS
        p450 235 kksrrdfldalllakkekkgesklsdeelaatvlellfaGvdTtsstlswaLyeLaknPevqeklreEidevl.gdkr........eptyddlqklpyl 324
                  +++ ++++ +l  +  + ++   + + la+++l l fa+++Tt++t+s a++ La + ++   l+eEid+v+ +d          +++ + + kl  l
  KHJ34071.1 265 GDEEGNGIAWILAHM--EPEQ-RRDPKVLANQLLALSFAAIHTTTNTTSQAILDLAAYRQYIPILMEEIDKVIlEDGYetsedgvlRLRKSSMPKLSKL 360
                 667899999999998..5555.6799***********************************************8887799999*99999********** PP

                 HHHHHHHHHHSCSSTTEEEEESSSCEEETT.EEE-TT-EEEEEHHHHHT-TTTSSST......TS--GGGGB-TTS........CTESSCTT--TTEEG CS
        p450 325 davikEtLRlhpvvplllpRevtkdvvirg.ylipkGtevivnlyalhrdpevfpnP......eeFdpeRFldekg........nskrksfaflPFGaG 408
                 d ++kE++R  p++ ++  R++ +dv ++  ++ipkG+++ ++++++h++ +    P      +eFd  RF + ++        ++ + s+ +l FG G
  KHJ34071.1 361 DSFLKESQRVNPLSLVSHLRRTITDVNLPSgHTIPKGIKIAIPAWYIHNNSDSLFSPgitkplDEFDGLRFYNLRKlpgnenrhQFVSTSYDSLSFGHG 459
                 ***************9999*********988******************9886666655555789*********999**9999988899********** PP

                 GGS-TTHHHHHHHHHHHHHHHHHHEEEEESTSTS CS
        p450 409 pRnCiGerlArmelklflatlLqnFevelqpetd 442
                  ++C+G+ +A  e+k++++ l++n ++ l p+++
  KHJ34071.1 460 NHACPGRFFAGNEIKVIMIELMRNWDFRL-PGDN 492
                 ****************************8.5554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (526 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       467  (0.0260472); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3762.44
//
Query:       KHJ34072.1  [L=490]
Description: putative delta -sterol reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   6.8e-160  532.5   6.7   8.4e-160  532.2   6.7    1.0  1  ERG4_ERG24  Ergosterol biosynthesis ERG4/ERG24 family
    0.00056   19.5   1.9    0.00075   19.1   0.2    2.1  2  DUF1295     Protein of unknown function (DUF1295)


Domain annotation for each model (and alignments):
>> ERG4_ERG24  Ergosterol biosynthesis ERG4/ERG24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  532.2   6.7  9.4e-164  8.4e-160       4     432 .]       9     490 .]       7     490 .] 0.97

  Alignments for each domain:
  == domain 1  score: 532.2 bits;  conditional E-value: 9.4e-164
  ERG4_ERG24   4 eyefggeigalgikiglp....vlelylnaiskfealklllpksldlaelkneikeldllvfegaiwerklftvfllfyvlqavlylllpGkvveGleL 98 
                 ++efgg+ ga+g+++glp      ++ +n++s+++ ++ll p +l + +l + i+++++ +   a w+  +  ++  +y++++vl+ llpG+ veG++L
  KHJ34072.1   9 SFEFGGPLGAFGVSFGLPllvySSTFLCNDLSGCPVPSLLSPSTLSIDRLLQDIGWPSNGIQGLASWDVSAKVLG--YYLINIVLHCLLPGEEVEGVQL 105
                 58****************5443346689************************************99**9999888..********************** PP

  ERG4_ERG24  99 sngkkLkYkinalas...lllvlaillvlqvtelfeltvlidnfvqlisvailfafalaivlYvrslkvkerkkd.kqlaaggvsGnliYDffiGreLn 193
                   g k  Yk+n+  s   +l++la+ +  + + ++++t+++dn+ ++++v+++ +++lai++Y+rs+ vk+++k+ +++a+gg +Gn++YD+fiGreLn
  KHJ34072.1 106 ACGGKHTYKLNTWSSsvfILTLLAAGTAYHGASFPVWTFIYDNYLHILTVNVIISYVLAIFVYIRSFGVKPGNKQyREIAVGGRTGNILYDWFIGRELN 204
                 ************9998877778899999**********************************************99*********************** PP

  ERG4_ERG24 194 PRlg.....slDlkmFlelRlgllllllinlaallkqyklygkvtdslllvllaqllYvfdgvkneeavlttmDittdgFGFmLaFgdlvlvPftYslq 287
                 PR++     ++D+km++elR+gll+++l++ a++++qyk+yg vtds++l+++ q+lY+ d+ ++e  vlttmDittdgFGFmL+Fgdlv+vPf+Yslq
  KHJ34072.1 205 PRVSlpllgEIDIKMWCELRPGLLGWMLLDFAFVAHQYKTYGFVTDSIMLLTAFQALYILDAWWMESSVLTTMDITTDGFGFMLSFGDLVWVPFVYSLQ 303
                 **98888889***************************************************************************************** PP

  ERG4_ERG24 288 tlYLsvhPselgwstvlvailvvlligyyiFrsansqknnFRtnPedpklkllkyiqtktGskLlvsGWyglarkinYlgDwlqslswsLatgfq.... 382
                 ++YL   P++lg  +   ++l +++igyyiFrsan+ kn FRtnP+dp ++ lky++tk GskLl++GW+g+ar+inY+gDw+++++++L+tg++    
  KHJ34072.1 304 ARYLAIYPVSLGILG-SSGVLGIVAIGYYIFRSANNEKNRFRTNPKDPRVRGLKYLNTKAGSKLLITGWWGIARHINYFGDWIMAWAYCLPTGIAgyii 401
                 **************8.99********************************************************************************* PP

  ERG4_ERG24 383 .......................................svlpyfyvlyFlvlLvhRelRDeekCkkkYGedweeYkkkvpykiipyvy 432
                                                        ++++yfy +yF  lL+hRe RDeekC+ kYG+dwe+Y+ +v y+iip+vy
  KHJ34072.1 402 rpvpfqnttefvlsdgaflfnrsetqvfeviqgsargygMIFTYFYLIYFTALLLHREIRDEEKCELKYGDDWERYREIVCYRIIPGVY 490
                 ***************************************************************************************98 PP

>> DUF1295  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1      0.25   2.2e+03      87     107 ..     149     169 ..     115     185 .. 0.61
   2 !   19.1   0.2   8.3e-08   0.00075     149     181 ..     359     392 ..     294     402 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.25
     DUF1295  87 llvvfvlQavllylvalpvll 107
                 +l ++++ ++++y++a+ v++
  KHJ34072.1 149 YLHILTVNVIISYVLAIFVYI 169
                 444444555555555544443 PP

  == domain 2  score: 19.1 bits;  conditional E-value: 8.3e-08
     DUF1295 149 pankgk.vldsGLwrysRHPNYfgealiWwglfl 181
                  + +g  +l +G w  +RH NYfg++++ w+++l
  KHJ34072.1 359 NTKAGSkLLITGWWGIARHINYFGDWIMAWAYCL 392
                 3344444999********************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (490 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       467  (0.0260472); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3522.60
//
Query:       KHJ34073.1  [L=560]
Description: putative mfs drug transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-43  146.9  51.7    2.4e-40  138.5  50.3    2.8  2  MFS_1     Major Facilitator Superfamily
    8.2e-18   64.1  29.6    1.2e-17   63.6  29.6    1.1  1  TRI12     Fungal trichothecene efflux pump (TRI12)
  ------ inclusion threshold ------
        0.2   11.5   0.8       0.47   10.3   0.8    1.5  1  DUF4479   Domain of unknown function (DUF4479)
       0.24    9.7   8.5       0.26    9.5   0.1    3.4  3  OATP      Organic Anion Transporter Polypeptide (OATP) family


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.5  50.3   5.4e-44   2.4e-40       4     352 ..      38     435 ..      35     436 .. 0.88
   2 !    6.5   0.0   0.00075       3.4     144     187 ..     501     541 ..     494     557 .. 0.75

  Alignments for each domain:
  == domain 1  score: 138.5 bits;  conditional E-value: 5.4e-44
       MFS_1   4 aaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlgagal 102
                 ++f s+l+ s+l++alp +++ +lg + ++++ ++++y++++  ++l++Grlsd ++r+ +l+lgl++f+lg+l  ++a ++  ++++r+++G+g+g+l
  KHJ34073.1  38 IGFTSFLDQSTLAVALP-IIGASLG-ASDQVSSIAAAYYITSTSFQLLYGRLSDIWSRKLILILGLAIFFLGSLGTSLAKNFSQVIIFRAITGIGGGSL 134
                 789**************.9******.99999*************************9999************66666878877**************** PP

       MFS_1 103 fpagaaliadwfpkeergraigllsagfslGailgpllggllasslg..Wravfyilaivsllafvlfllllpeepperkrkspkeee........... 188
                 ++++++++ d+++ +ergr  g++++++++ + +gp++gg las  +  Wr++f i+ + s++ ++++l++lp++++e  +k++ +             
  KHJ34073.1 135 VTVAQIIVGDVVSLRERGRWQGIVGSAIAVTYGIGPIIGGHLASRSSnsWRWIFRINLFTSAFTILMVLAFLPQKKVEGNWKTKLKTIdffgtilslag 233
                 *******************************************776677*********************************999999*********** PP

       MFS_1 189 ........................................kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlglsglllag 247
                                                          + ++ pl+p   ++++++ + +  ++ +++++ f+  ++++p++ +  +g+s    a+
  KHJ34073.1 234 ssltiiglsfggeifpwqspqfiviitlgglimaafllweWKGAKLPLIP--LSMFNSRMIKATSLVTFIGGWNFYVQVFFIPSFYNLAYGYS-PSKAA 329
                 ************************************99988888888888..7777777664455555555558888999****99*******.56666 PP

       MFS_1 248 lllallalvgailallagrlsdrlgrrrrlllallllllaalglallavt.ssavllllvlvliGfglgfvfpsllalasdlappeeagtasglfntag 345
                 ++l  + +v  +++ l+g +++  gr r  l+++  l +++lgl     + +s +  l+  +l+Gfg+g++f ++l ++++ ++ e ++ ++g+ ++++
  KHJ34073.1 330 AMLLPVTVVQTVSSTLGGLVVTWRGRYRESLIFGYTLWCVSLGLHSSLRPsTSLAQQLIYGFLLGFGSGLTFQPSLIAIQSAVSVEFMAVVTGVRSFIR 428
                 666666666666688888888999997777777777777777776666663444555558888************************************ PP

       MFS_1 346 slggalg 352
                  ++g +g
  KHJ34073.1 429 DIAGTFG 435
                 ****998 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.00075
       MFS_1 144 lasslgWravfyilaivsllafvlfllllpeepperkrkspkee 187
                 +    g+r vfy+ ++++++a+v  ++++p+ + + + ++++ +
  KHJ34073.1 501 FE---GFRRVFYLGTALGFVAIVTTIFFIPQVELSAEENNETNL 541
                 44...89**************99877888877777777766665 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.6  29.6   2.7e-21   1.2e-17      55     551 ..      40     523 ..      22     528 .. 0.77

  Alignments for each domain:
  == domain 1  score: 63.6 bits;  conditional E-value: 2.7e-21
       TRI12  55 atyfvlq.asasalpnilqdvgqsensslfstlwttgqavsilvmgrltdrfgrrpfvilthilglvgaivgctatkfntllaamtllgvaagpa.gas 151
                  t f+ q + a alp i   +g s++ s +++ + +  +   l+ grl+d + r+ ++il   + ++g++    a++f  ++   ++ g+  g     +
  KHJ34073.1  40 FTSFLDQsTLAVALPIIGASLGASDQVSSIAAAYYITSTSFQLLYGRLSDIWSRKLILILGLAIFFLGSLGTSLAKNFSQVIIFRAITGIGGGSLvTVA 138
                 355555514589**************999999999988989999**********************************************999861567 PP

       TRI12 152 plfvgelmsnktkflgllivsipvvvtsglspylgqrlaiqg..swrwifyiyiitsaiavllivvwyyppsfaqlhgkkvrkreelakldwigiilvi 248
                  ++vg+++s + +     iv   + vt g++p +g  la +   swrwif i + tsa ++l+++  + p   +++ g+    + +l  +d+ g il  
  KHJ34073.1 139 QIIVGDVVSLRERGRWQGIVGSAIAVTYGIGPIIGGHLASRSsnSWRWIFRINLFTSAFTILMVL-AFLPQ--KKVEGNW---KTKLKTIDFFGTILSL 231
                 899******988887778899999999***********9864227************99876654.44553..4555654...566999********** PP

       TRI12 249 vgvslfllgvswggkpnspwnsakviglissglgslvvfalyevygkpvrpivppalfkdtrgfvcillissimgamnlslviiypqqvvn.ifgsslk 346
                 +g sl ++g+s+gg+   pw+s + i +i+ g   +  f l+e  g  + p++p ++f+ +r + +  l++ i g  n+ + +++     n  +g s  
  KHJ34073.1 232 AGSSLTIIGLSFGGEI-FPWQSPQFIVIITLGGLIMAAFLLWEWKGA-KLPLIPLSMFN-SRMIKATSLVTFI-GGWNFYVQVFFIPSFYNlAYGYSPS 326
                 **************86.7************9999999999**98875.68********7.5777777777666.5556665555544555515777653 PP

       TRI12 347 nweetawmsatasfgtgagvvvlgslfhlvrhirwqilvgalwltaflgamssvnrdnknaaialsvlsgfvvawaqditmllvqfittdedlgvaf.a 444
                   + +a +   + + t +   + g ++      r  ++ g       lg  ss+      +++a  ++ gf++++   +t+    +i+ +  + v f a
  KHJ34073.1 327 --KAAAMLLPVTVVQTVS-STLGGLVVTWRGRYRESLIFGYTLWCVSLGLHSSLRP---STSLAQQLIYGFLLGFGSGLTFQ-PSLIAIQSAVSVEFmA 418
                 ..3344444444444443.33344444444567777777765556779**999965...56789999999999999999975.5788999999998757 PP

       TRI12 445 vvaaarpfagsiftaafislysnrypkelashlssalrgtdipqasfss..lleaaksgrieavkalpgmtteiaavvsramadsytasyanvyyfama 541
                 vv+  r f+  i  +  +++        +   l   l  t   qa +ss  + e  k+  +   k  p + +++  + s     +y   +  v+y+  a
  KHJ34073.1 419 VVTGVRSFIRDIAGTFGLAIAGSIINIMIRKAL---LNITANGQAVLSSqqINEIQKNPSLPRSKIDPVILENVDKIRSLV-VSAYFEGFRRVFYLGTA 513
                 888899999988776666666655554444443...334444555554422789999999999999999999999887765.56899999********* PP

       TRI12 542 lgvipiiasl 551
                 lg + i++++
  KHJ34073.1 514 LGFVAIVTTI 523
                 ***9999875 PP

>> DUF4479  Domain of unknown function (DUF4479)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.8    0.0001      0.47      29      57 ..     444     472 ..     441     473 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.0001
     DUF4479  29 NifnaskllelegnGqveLteeqvakLne 57 
                 Ni+  + ll++++nGq  L+ +q++++++
  KHJ34073.1 444 NIMIRKALLNITANGQAVLSSQQINEIQK 472
                 888888899*****************986 PP

>> OATP  Organic Anion Transporter Polypeptide (OATP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1   5.7e-05      0.26     335     384 ..     157     206 ..     153     220 .. 0.92
   2 ?    0.9   0.6     0.023     1e+02     312     356 ..     308     351 ..     277     378 .. 0.71
   3 ?    2.2   0.0    0.0093        42      50     106 ..     492     544 ..     446     559 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 5.7e-05
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP 335 ltGvvvipgaalGillgGllvkklklsakklaklvlvvsllsllllllll 384
                 ++G+++ +  ++G ++gG l ++   s + + +++l++s +++l++l++l
  KHJ34073.1 157 IVGSAIAVTYGIGPIIGGHLASRSSNSWRWIFRINLFTSAFTILMVLAFL 206
                 68999999************************************999876 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.023
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP 312 GfitFlpkylEtqFslsaseAnlltGvvvipgaalGillgGllvk 356
                   + F+p +    ++ s+s+A+ ++ +v+++  +    lgGl+v 
  KHJ34073.1 308 VQVFFIPSFYNLAYGYSPSKAAAMLLPVTVVQTVS-STLGGLVVT 351
                 45689*****************9999999877665.556777764 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.0093
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP  50 illilfvsYfggrghrPrwigigallmalgslllalPhfisgkyeyeeeesesekqk 106
                 i  +l+vs + +  +r  ++g+++ ++a+ + ++ +P+        ee+++++ +++
  KHJ34073.1 492 IR-SLVVSAYFEGFRRVFYLGTALGFVAIVTTIFFIPQVELSA---EENNETNLSRE 544
                 33.4555555566789999999999999999999999976643...33333322221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (560 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       575  (0.0320709); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 4140.55
//
Query:       KHJ34074.1  [L=700]
Description: putative c6 zinc finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.8e-12   46.2   0.7    5.2e-12   45.4   0.7    1.4  1  Fungal_trans  Fungal specific transcription factor domain
    2.8e-07   30.6  17.0    3.3e-07   30.3  14.7    2.3  2  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.7   5.8e-16   5.2e-12       1     176 [.     102     272 ..     102     284 .. 0.80

  Alignments for each domain:
  == domain 1  score: 45.4 bits;  conditional E-value: 5.8e-16
  Fungal_trans   1 ldrffsnfhpqfpilhkpsflpktssenssksayasplll..lailalGalfsesetkesnssltses..qefiafplraeilihedfsspssslwi 93 
                   +d ff+n +p +pilh+  +  +   +  ++ +y+    l  +++++ G   ++++  ++  + t+ +     i++ lr +  +  d+   ++ l++
    KHJ34074.1 102 IDFFFTNMYPSLPILHRGRLEQQILFADQNIDTYCLLTSLcaFMMIQPGIKIAGNILERDCLPGTNLVsgNLLIQETLRIRRGY--DYLEAPT-LNS 195
                   689**************8888888555566666665555556***********************9886655555555555555..5544555.677 PP

  Fungal_trans  94 lq.sLlllelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppll 176
                   l  s++l+ +y ++++  ++++ h+  a +la+  gL++++ y +       ++ ++ +rrRl+w  F++++ +a++ +rp  l
    KHJ34074.1 196 LVtSFFLFGCY-FGLDLHNKAWFHLREATTLAHMNGLQKEETYLK------FDAIDSSRRRRLFWLLFVTERAYAFQRNRPLSL 272
                   76266666665.5666689**************************......77777*********************9999854 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3  14.7   3.7e-11   3.3e-07       1      39 [.       7      43 ..       7      44 .. 0.90
   2 ?   -1.6   0.0      0.34     3e+03      22      33 ..     660     670 ..     656     674 .. 0.80

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 3.7e-11
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCCCE CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfysesskr 39
                +aCd C+++KvKCd+ +P C+nC +  l Ct y+   ++
  KHJ34074.1  7 RACDACHRRKVKCDGINP-CRNCYSAKLCCT-YHAIPQK 43
                69****************.************.7766555 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.34
                 HHHHCTHHHCCC CS
     Zn_clus  22 nCkklnleCtfy 33 
                 +C  ++++C+ +
  KHJ34074.1 660 SCSGSSAPCV-N 670
                 6888999998.5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (700 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 4946.71
//
Query:       KHJ34075.1  [L=251]
Description: putative ribulose-phosphate 3-epimerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.6e-61  206.0   0.0    3.1e-60  203.0   0.0    1.9  1  Ribul_P_3_epim  Ribulose-phosphate 3 epimerase family
  ------ inclusion threshold ------
      0.024   14.2   0.1      0.046   13.3   0.1    1.5  1  OMPdecase       Orotidine 5'-phosphate decarboxylase / HUMPS 
       0.11   12.3   0.0        0.2   11.4   0.0    1.3  1  QRPTase_C       Quinolinate phosphoribosyl transferase, C-ter


Domain annotation for each model (and alignments):
>> Ribul_P_3_epim  Ribulose-phosphate 3 epimerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.0   0.0   5.1e-64   3.1e-60       2     198 .]       7     229 ..       6     229 .. 0.88

  Alignments for each domain:
  == domain 1  score: 203.0 bits;  conditional E-value: 5.1e-64
                     EEEBGGGS-GGGHHHHHHHHHHTT-SEEEEEEEBSSSSS-B-B-HHHHHHHGGG........E-S-EEEEEESSSHHHCHHHHHHCT-SEEEEE- CS
  Ribul_P_3_epim   2 iapSllsadfarlgeevkaveeagadllHvDvmDghfvpNltigplvvealrkl........telpldvHLmveevdrivpefaeagasiisvHa 88 
                     iapS+lsadfa lg e +++ + g+ +lH+D+mDghfvpN+t+g  vv ++r++            +d+H+m++e++++v+ef +ag ++ ++H+
      KHJ34075.1   7 IAPSILSADFADLGAECRKMMDCGSSWLHIDIMDGHFVPNITFGAPVVTKIRSHvpkpqmkhGVGTFDCHMMIAEPKKWVKEFHKAGCDLYCFHY 101
                     9***************************************************996655433222369**************************** PP

                     S................T-TTHHHHHHHHHHTTSEEEEEE-TT--GGGGTTTCCC-......SEEEEESS-TT-SS----CCHHHHHHHHHHHHH CS
  Ribul_P_3_epim  89 E................alehlkrtiqeikeaGakaglvlnpatplealeyllekl......dlvllmsvePgfgGQkFipevlekikkvrklid 161
                     E                + + ++ +i+ i+e+G  ag++++p tp+++l ++le+       d+vl+m+v PgfgGQkF+ + l+k++++rk+++
      KHJ34075.1 102 EaainstaaespeassnEKTSPRDLIRYIHECGLLAGIAIKPDTPVDVLWEILESKdvrevpDMVLVMTVYPGFGGQKFMASELPKVQELRKRYP 196
                     *877776555554433223346779***********************9999876422222479******************************* PP

                     HHT---EEEEESS--TTTCHHHHHHT--EEEESHHHH CS
  Ribul_P_3_epim 162 ekeldlkievDGGvkldnieqiaeagadvlVagsavf 198
                     +    l+ievDGG+  ++i+q+a+aga+v+Vagsavf
      KHJ34075.1 197 N----LNIEVDGGLGPATIDQAAQAGANVIVAGSAVF 229
                     8....*******************************9 PP

>> OMPdecase  Orotidine 5'-phosphate decarboxylase / HUMPS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   7.8e-06     0.046     183     223 ..     200     239 ..     173     241 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 7.8e-06
                 EEECTTCCGGGHHHHHHHTTCSEEEESHHHHTSSSHHHHHH CS
   OMPdecase 183 ggdgkgqqyntpekligiagadiiivGRgIlkagdpveeae 223
                  ++ +g+ + t++++++ aga++i++G ++++a+dp e + 
  KHJ34075.1 200 IEVDGGLGPATIDQAAQ-AGANVIVAGSAVFGAKDPGEVIA 239
                 56789999999999988.99****************98765 PP

>> QRPTase_C  Quinolinate phosphoribosyl transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.3e-05       0.2     118     161 ..     188     231 ..     178     233 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.3e-05
                 HHHHHHHSTTSEEEEESS--TTTHHHHHCTT-SEEEECHHCHTB CS
   QRPTase_C 118 veelkeknkrvlievSGgvtlenveeyaksgvdvisvgalthsv 161
                 v+el+++ +++ iev Gg+   ++ + a+ g +vi  g+++ ++
  KHJ34075.1 188 VQELRKRYPNLNIEVDGGLGPATIDQAAQAGANVIVAGSAVFGA 231
                 7789999999****************************998666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (251 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       460  (0.0256568); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1815.67
//
Query:       KHJ34076.1  [L=323]
Description: putative nad h-dependent d-xylose reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.2e-41  140.0   0.0    1.2e-40  139.6   0.0    1.1  1  Aldo_ket_red  Aldo/keto reductase family


Domain annotation for each model (and alignments):
>> Aldo_ket_red  Aldo/keto reductase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.6   0.0   6.6e-45   1.2e-40       2     292 ..      19     303 ..      18     305 .. 0.89

  Alignments for each domain:
  == domain 1  score: 139.6 bits;  conditional E-value: 6.6e-45
                   EEEE-SSS-ST.TS-HHHHHHHHHHHHHTT--EEE--TT-TTTHHHHH.HHHHHHH-TTTGGG-EEEEEE--SSSTTSSSS-HHHHHHHHHHHHHHH CS
  Aldo_ket_red   2 lglGtwqlgskeeiskeealellrraleaGinffDtAevYgkgqseel.lGealkksrkkreeviiatKvdlrdaeiksglskeniresleeslkrL 97 
                   +g+G+w+++       +  ++++  a++aG+++fD A  Yg+ +     +++a+k+  +kre++++++K+      ++s +  + ++   +++l  L
    KHJ34076.1  19 VGFGLWKVS------NNICADMVYSAIKAGYRLFDGAADYGNEKEVGQgVARAIKDGLVKREDLFLVSKL------WNSFHDYDKVEPIARKQLADL 103
                   688888555......4678899999***************6666655567779999**************......********************* PP

                   T-S-EEEEEE-S--TTS-.........................HHHHHHHHHHHHHTTSEEEEEEES--HHHHHHHHHTTT--EEEEE-B-BTT-HH CS
  Aldo_ket_red  98 gtdyvDllllHrpdpslp........................sieevldaleelvkeGkiraiGvSnfsveqlekakkkkkvkivavqveynllrel 170
                   + dy+Dl+ +H p                             si e+++a+e+lv +G+ r+iG+Snf+   +  +++ +k++++++q+e+n++  l
    KHJ34076.1 104 QIDYFDLYIVHFPIALKWvdpevryppgffydgksevrlsnaSIQETWMAMEDLVNKGLTRSIGISNFQGSLILDLLRYAKIRPATLQIEHNPY--L 198
                   ***********8765444467888*********************************************66666677*****************..* PP

                   HHTTHHHHHHHTT-EEEEBSTTGGGTTGTTTSS---SSSCCC-------TS-HHHHHHHHHHHHHHHHTT--HHHHHHHHHTTSTT-SEEEE--SSH CS
  Aldo_ket_red 171 eeegllelckkkgvpliaysplggGlltgkyqseedkedkeprkdlkrdertsknldaaeelselakehgvslaqlalryalsqpavgivipgasni 267
                    +  ll+l++ +g+ + ays +g  ++ + + ++++  +    +           l   +++  la +++ ++aq+ lr+a+  +++++vip++ n+
    KHJ34076.1 199 VQPTLLKLAESEGIVVTAYSSFGPQSFIELEFQKAKDTP----R-----------LFDHDIITTLATKYKRTPAQILLRWAT--QRGISVIPKSNNP 278
                   ***********************8777744443333321....2...........356799*********************..9************ PP

                   HHHHHHHGGGG----HHHHHHHHHH CS
  Aldo_ket_red 268 eqlednldalelklseeevaeldel 292
                   ++l +nld+  +++++++++ ++ l
    KHJ34076.1 279 DRLIENLDVTGFDMQKDDIESINTL 303
                   ********************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       345  (0.0192426); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2464.58
//
Query:       KHJ34077.1  [L=268]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       662  (0.0369234); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1983.51
//
Query:       KHJ34078.1  [L=359]
Description: putative gdsl lipase acylhydrolase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      6e-11   42.7   0.0    7.3e-11   42.4   0.0    1.1  1  Lipase_GDSL    GDSL-like Lipase/Acylhydrolase
    0.00059   20.3   2.1     0.0031   17.9   2.1    2.2  1  Lipase_GDSL_2  GDSL-like Lipase/Acylhydrolase family
  ------ inclusion threshold ------
      0.013   15.3   0.2      0.049   13.4   0.2    2.0  1  YL1_C          YL1 nuclear protein C-terminal domain


Domain annotation for each model (and alignments):
>> Lipase_GDSL  GDSL-like Lipase/Acylhydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   0.0   1.2e-14   7.3e-11       1     197 [.      36     340 ..      36     343 .. 0.85

  Alignments for each domain:
  == domain 1  score: 42.4 bits;  conditional E-value: 1.2e-14
                  EEEEESHHHH..............................TTTHHHHHHHCCCCEECCCTTC..........................GCEEEEEEEC CS
                  xxxxxxxxxx..............................xxxxxxxxxxxxxxxxxxxxxxx.........................xxxxxxxxxx RF
  Lipase_GDSL   1 ivafGDSltd..............................Gdgaatlntiqlktpknlnefdl.........................aldrianign 43 
                  +vafGDS td                              G+++a + +i+ +       +++                         ++ + +++  
   KHJ34078.1  36 LVAFGDSYTDesrlayftthngeappvgylppsststaggGVTWARFVSINTGAKL--YNYAVsgavcdnkiiyryvsalngpfpdvvYEVNAFVADS 131
                  59*************************88888888888776677777777777733..3333356777777777777777777788887777777777 PP

                  TTHHHHHHHCCH.ECTTTECHHHHHCTTSEEEEE--CTCC..-EECSSCTTTCEEHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-SSTCH........ CS
                  xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........ RF
  Lipase_GDSL  44 kgasdnelqqll.nkyplkseqlkalhpdlviislGtNDs..nlgkkstdaakkeaeeyiknlreaikelkeegapkaivvlvsppglgp........ 130
                  k  +   ++  + n y++++         ++ i++GtND+    +  + +  + + + +++ + +  +++++ g + ++ ++++p++l+p        
   KHJ34078.1 132 KYIDPSTKVPFYsNRYENNT---------VYSIWIGTNDLgvSGFITDSNLGGSTLSTFTDCIFDKFDQIYAIGGRYFVLMNLAPLQLSPlygipgag 220
                  77777777777799999999.........***********65444455555599******************************************** PP

                  ...............CTCCCCHCCHHHHHHHHHHHHHHHHHHHH....HCTEEEECHHHHHHHTHCCGCHCH.......................... CS
                  ...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxx.......................... RF
  Lipase_GDSL 131 ...............qeekdakklgekgnefvgeynqrlndlae....kdgfavvDlydelqglsgieqlka.......................... 183
                                  e ++++k++ k+ ++++ey   ++++++    ++ fa +D +  +++   + ++ +                          
   KHJ34078.1 221 glskssywadkpgnsTEVSSKMKEYTKTVNALFEYRVPYENIIAkrypGASFAIFDTNALITDI--YNNPDNyltppanatdqyfkcepvfggactkk 316
                  *************99777777888888888888888888888888*******************..67777788************************ PP

                  ..........TSSSB-HHHHHHHH CS
                  ..........xxxxxxxxxxxxxx RF
  Lipase_GDSL 184 ..........DglHpsekgyekla 197
                            D lHpsek  e++a
   KHJ34078.1 317 pegldhylwfDELHPSEKTDEIIA 340
                  ****999999999********998 PP

>> Lipase_GDSL_2  GDSL-like Lipase/Acylhydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   2.1   5.1e-07    0.0031       1      82 [.      38     169 ..      38     338 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 5.1e-07
                    EEESHHHHTCTTB....................CCHCHHCCCCCCCHHHTT-EEEEE.EEHCCH-H.................HHHHHHHH..... CS
  Lipase_GDSL_2   1 alGDSiTaGygad....................gggrsypaylarllaarlgldvvnnlgvsGatt...............allrllerlr..... 56 
                    a+GDS+T+ +                       ++++++  + ar ++ ++g++ +n ++vsGa                 +        +     
     KHJ34078.1  38 AFGDSYTDESRLAyftthngeappvgylppsstSTAGGGVTW-ARFVSINTGAKLYN-YAVSGAVCdnkiiyryvsalngpF--------Pdvvye 123
                    79******877778999****************99999****.**************.******554445666444444430........343333 PP

                    ......CTGGG-T..............SEEEEE--CCCCCTT--HH CS
  Lipase_GDSL_2  57 ......dllrlkp..............dlvtiliGtNDlgrgvpaa 82 
                          d   ++p               +  i+iGtNDlg  +  +
     KHJ34078.1 124 vnafvaDSKYIDPstkvpfysnryennTVYSIWIGTNDLGVSGFIT 169
                    3333335555555998889999999988899*******87665544 PP

>> YL1_C  YL1 nuclear protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.2   8.2e-06     0.049       9      22 ..     131     144 ..     130     145 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 8.2e-06
       YL1_C   9 AkYrDPkTgLpYan 22 
                  kY DP+T++p+++
  KHJ34078.1 131 SKYIDPSTKVPFYS 144
                 69**********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       302  (0.0168442); expected 358.6 (0.02)
Passed bias filter:                      273  (0.0152267); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2662.13
//
Query:       KHJ34079.1  [L=486]
Description: putative g-patch dna repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.9e-12   46.3   1.2    6.3e-12   45.2   1.2    1.5  1  G-patch     G-patch domain
    5.6e-06   26.1   0.1    1.9e-05   24.4   0.0    1.9  2  RRM_1       RNA recognition motif. (a.k.a. RRM, RBD, or RNP d
  ------ inclusion threshold ------
       0.15   11.5   1.5       0.27   10.7   1.5    1.3  1  HEPN_AbiU2  AbiU2


Domain annotation for each model (and alignments):
>> G-patch  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   1.2   1.1e-15   6.3e-12       2      41 ..     310     349 ..     309     354 .. 0.91

  Alignments for each domain:
  == domain 1  score: 45.2 bits;  conditional E-value: 1.1e-15
     G-patch   2 sniGvkmLqkmGWkpGqGLGkkeqGiaePieakikkdraG 41 
                 ++++ ++++k+GW++G+GLG +e+Gi++P+++k +k+++ 
  KHJ34079.1 310 KKFAERLMSKYGWSKGKGLGAEESGIINPLQVKLEKRKKK 349
                 78999*****************************999865 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.82   4.9e+03      20      30 ..     382     392 ..     382     395 .. 0.80
   2 !   24.4   0.0   3.2e-09   1.9e-05      20      69 ..     424     470 ..     416     471 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.82
                 HTTSCEEEEEE CS
       RRM_1  20 skfGpiksikl 30 
                 skfGpi+++ l
  KHJ34079.1 382 SKFGPISEVIL 392
                 79****99866 PP

  == domain 2  score: 24.4 bits;  conditional E-value: 3.2e-09
                 HTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  20 skfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 +k+G+++++ + r+    ++   fV+F+s+ +A +A++al g+ ++g+++
  KHJ34079.1 424 EKYGRVERVYIHRT---GATALVFVKFTSQLSALRAVNALEGRIFNGKTI 470
                 57***********7...9999***************************99 PP

>> HEPN_AbiU2  AbiU2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.5   4.5e-05      0.27     111     149 ..     157     191 ..     103     203 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 4.5e-05
  HEPN_AbiU2 111 ellellrklikklkkvleklkklRdkviAHrdlkkkeak 149
                   +e++++  +    +l  ++++ d+++AHr+ k++ + 
  KHJ34079.1 157 NNFEEYQNSDE----KLREVREWKDRLYAHREAKRSVDR 191
                 44444444444....6666**************998775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       703  (0.0392102); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3638.48
//
Query:       KHJ34080.1  [L=282]
Description: hypothetical protein EV44_g3918 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 2164.16
//
Query:       KHJ34081.1  [L=1074]
Description: putative sterol regulatory element-binding protein cleavage-activating protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-35  122.8   8.5    2.3e-35  121.7   7.9    2.0  2  Sterol-sensing  Sterol-sensing domain of SREBP cleavage-activ
    6.9e-08   31.1   8.7    1.1e-07   30.4   8.7    1.2  1  Patched         Patched family
  ------ inclusion threshold ------
       0.11   13.5   0.5        3.9    8.5   0.2    2.9  2  WD40            WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> Sterol-sensing  Sterol-sensing domain of SREBP cleavage-activation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.7   7.9   3.9e-39   2.3e-35       2     146 ..     310     455 ..     309     462 .. 0.95
   2 ?   -3.5   0.0       1.4   8.1e+03      39      54 ..     705     720 ..     703     728 .. 0.78

  Alignments for each domain:
  == domain 1  score: 121.7 bits;  conditional E-value: 3.9e-39
                     HHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHCHHHHHHHHTTTCHHHHHHHHHHHHCCCCHHCCCHHHHHH CS
  Sterol-sensing   2 vkskfgLglagviivllsvasslgllaylgltltliilevlPflvlavgvdnifvlvkavqrtsrsldeseriaealgevgpsilltsltellal 96 
                     +ks++gL +a +i+v++s+++s++++a+++++l+ i+ e +P +vlavg++ni +++ av+ t ++ +   r++ealg++++ +l+   ++l++l
      KHJ34081.1 310 FKSRIGLIIAVIIQVGTSIVASFTVCAVFKIDLSKIPREAYPLVVLAVGMENISRFISAVVVTRSEVSTATRLGEALGKISHIALAGVGQNLAIL 404
                     69********************************************************************************************* PP

                     HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH.HCTXXT CS
  Sterol-sensing  97 llgaltdvpavqeFclfaavavlvdFllqitfFvavLsldirre.eserld 146
                      l +  ++p++++Fc+faa+a+++dF++ +tfF+a+Ls+d++r+ ++e l+
      KHJ34081.1 405 WLLSRGTYPQITAFCTFAAIALIFDFFFLLTFFSAILSVDLQRMeLNEALS 455
                     *888****************************************5555555 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.4
                     HHHHHHHHHHHCHHCC CS
  Sterol-sensing  39 levlPflvlavgvdni 54 
                     l+v+P l+la++ d  
      KHJ34081.1 705 LNVFPILALAIDNDSK 720
                     679999***9998865 PP

>> Patched  Patched family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   8.7   1.9e-11   1.1e-07     246     457 ..     306     630 ..     282     633 .. 0.65

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 1.9e-11
     Patched 246 kidwvrskpilailgvlspvlAivsslGlllwlGfrfnsi.vtvtPFLvLaiGvDdmflmvaawkrteaklsvkkrigealseagvaitiTslTdvlsF 343
                 k    +s++ l i+ ++    +iv+s+ +  ++ +   +i     P +vLa+G+ ++   + a+  t+ + s+  r+geal      i++  + + l+ 
  KHJ34081.1 306 KLRAFKSRIGLIIAVIIQVGTSIVASFTVCAVFKIDLSKIpREAYPLVVLAVGMENISRFISAVVVTRSEVSTATRLGEALGKIS-HIALAGVGQNLAI 403
                 445567777788888888889999999999999999999944689************999999999***************9875.6888888777776 PP

     Patched 344 g.iGaittlpaiqlFciytavailfdfiYqitffaavlai.aakaeaegrhsllliiekeesps.....klqeiesessek.................. 417
                   +    t p+i  Fc ++a+a++fdf++ +tff+a+l++  +++e ++  s         s+       ++++++ +s                    
  KHJ34081.1 404 LwLLSRGTYPQITAFCTFAAIALIFDFFFLLTFFSAILSVdLQRMELNEALSKA------SSHNilmqmPIERLSRLTSIYtilkrilplfsriagtif 496
                 514556789*****************************9944666766642222......222211111223333333222455555556666666666 PP

     Patched 418 ..........................................................................................dddkskeae 426
                                                                                                           d  +++   
  KHJ34081.1 497 ligfalmahwhffdnesiyqvishiagqtlshssstsllsmdihpartptawirmqdhetaheviqiikphansiiarvydplifvldgsDRTPNESGV 595
                 666666666666666666666666666666666666666666666666666666666666666666666666666666666666666554333333322 PP

     Patched 427 e....lkskffreiyapfllnksvrlvvlllfvvy 457
                 +       +f+++ ++ fl   s  +++l+lf+ y
  KHJ34081.1 596 RpflpAAYDFVKNQFGYFLFTFSMAIAALFLFLNY 630
                 21221233666666666666666666666666666 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.2   0.00065       3.9       6      38 .]     655     688 ..     649     688 .. 0.80
   2 ?    1.9   0.0     0.082   4.9e+02      12      33 ..     709     730 ..     702     735 .. 0.70

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00065
                 EEE.SS.SS....EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tlt.GH.ss....vtslafspdgawlasGsdDgtvriWd 38 
                 tl+ GH  +    vts+    dg +++ G  D+ + iW+
  KHJ34081.1 655 TLSeGHaLDivllVTSI----DGILVTVGL-DRRIWIWN 688
                 45459964478889999....****98888.*******8 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.082
                 SEEEEEEETTSSEEEEEETTSE CS
        WD40  12 svtslafspdgawlasGsdDgt 33 
                 ++ +la + d++wla  s    
  KHJ34081.1 709 PILALAIDNDSKWLAILSAQDR 730
                 4889*********974333555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1074 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       758  (0.0422779); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.26s 00:00:01.02 Elapsed: 00:00:00.43
# Mc/sec: 7487.26
//
Query:       KHJ34082.1  [L=235]
Description: putative hydrate epimerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.2e-35  120.4   0.0    8.6e-35  120.1   0.0    1.1  1  YjeF_N    YjeF-related protein N-terminus


Domain annotation for each model (and alignments):
>> YjeF_N  YjeF-related protein N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.1   0.0   4.8e-39   8.6e-35       2     170 ..      29     191 ..      28     192 .. 0.94

  Alignments for each domain:
  == domain 1  score: 120.1 bits;  conditional E-value: 4.8e-39
      YjeF_N   2 eeLmenagravaevlrallgnspaekkvlvlvGsgnnGgdglaaArhLaqegakVtvllleeeekldedaeralellkkaggkvveekpeedleeklsa 100
                 ++Lme ag +v++v+++   +  ++k++l+ +G+gnnGgdgl+aArhL + g++ t+  + ++++ ++  +r + +l+ + + ++ +  ++ +      
  KHJ34082.1  29 DQLMELAGLSVSQVFHEVN-KYKNGKNILIACGPGNNGGDGLVAARHLKHFGYHPTI--FYPKRNESNLFKRLVIQLEDLDVPFTNDFVSATE------ 118
                 68**************999.799**********************************..5788899*******************87777765...... PP

      YjeF_N 101 pvdlviDAllGiglrgelreelaeliewlnsseapvlavDiPSGldadtGavs...gtavkadvtvtfgapkr 170
                 + d++iDA++G++++ge+re++  +i  l +++ pvl+vD+PS +d ++G +s   g  +++ v v++ apk+
  KHJ34082.1 119 STDYIIDAIFGFSFSGEIREPFRGVIAALEKTKLPVLSVDVPSSWDIEKGPPStglGSNFNPAVLVSLSAPKP 191
                 49***************************************************666666*************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (235 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       313  (0.0174578); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1632.08
//
Query:       KHJ34083.1  [L=206]
Description: putative gtpase inhibitor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.4e-08   31.3   0.1    1.1e-07   31.0   0.1    1.0  1  Phosducin    Phosducin
    0.00045   20.2   0.2    0.00083   19.3   0.2    1.4  1  Thioredoxin  Thioredoxin


Domain annotation for each model (and alignments):
>> Phosducin  Phosducin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.1   1.3e-11   1.1e-07      89     255 ..      22     194 ..       3     203 .. 0.76

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 1.3e-11
                 HHHHHTT.----HHHHHHHHHHHHHHHHHHH--.....-----SEEE--SHHHHHHHHHSS-TT-EEEEEEE-TTSTTHHHHHHHHHHHHHH-TTSEEE CS
   Phosducin  89 eyelidk.dkddeeflrkyrkqrmdemrqklsk.....gprfkfvlelesgeqfldtidkeqkitlivvhiyedgvkgtealnssliclaaeyptvkfc 181
                 e +li   + dd   +  +r +r+++++++ +         +++ +e++  + ++d+i     +  +vvh  +d    ++ ++  li la+ +   +f 
  KHJ34083.1  22 EDDLIAAlEDDDSASFVAFREKRIQQLHEEYNLakarlSSGYGKFIEIKEEKVLMDLIT---SSINVVVHFAKDDFARCKIMDDHLITLATTHYNTRFV 117
                 445555414455667889999999999986443111115679********999999997...57789***********************999999999 PP

                 EEEHHHH-.-TTSS-TTT-SEEEEEETTEEEEEETTGGGGS-..TT--.HHHHHHHHHTTT-S---XXXXXXXXXX.. CS
   Phosducin 182 kvkasvig.asdrfsrdvlpallvykagellsnfvrvtdqla..edff.avdleaflqefgllpekevlvlesvrnsa 255
                 k+   +      ++  ++lp++l +  g+++  +v     l+  e++f + dle  l   g++p  +   l++    a
  KHJ34083.1 118 KICVENSPfLVMKMRVKILPCVLCWINGKVVDRIVGFEG-LGchEEIFtTRDLEIRLLATGVIPRSDYIRLKKGTIVA 194
                 98877765246788899***************9998754.43336666167*************99988888776644 PP

>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.2   9.3e-08   0.00083      13      90 ..      77     153 ..      65     160 .. 0.90

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 9.3e-08
                  HHTTTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEES CS
  Thioredoxin  13 evakekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkkyeg 90 
                  ++  ++ +v+v F  +  + Ck +  +l +la+++  + +++k+ v++++ l+ k+ v+ +P ++ + ngk v++++g
   KHJ34083.1  77 DLITSSINVVVHFAKDDFARCKIMDDHLITLATTHY-NTRFVKICVENSPFLVMKMRVKILPCVLCWINGKVVDRIVG 153
                  44556889**************************99.9*********************************9999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (206 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       655  (0.036533); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.20s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1638.26
//
Query:       KHJ34084.1  [L=655]
Description: putative 3-methylcrotonyl- carboxylase subunit alpha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      5e-70  235.3   0.0    1.2e-69  234.1   0.0    1.6  2  CPSase_L_D2      Carbamoyl-phosphate synthase L chain, ATP bi
    2.6e-35  121.3   0.0    5.6e-35  120.2   0.0    1.6  1  Biotin_carb_N    Biotin carboxylase, N-terminal domain
    4.1e-35  120.1   0.0    8.3e-35  119.2   0.0    1.5  1  Biotin_carb_C    Biotin carboxylase C-terminal domain
    3.4e-09   36.6   0.0    8.1e-09   35.3   0.0    1.5  1  Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
    1.6e-05   24.5   0.0    2.9e-05   23.7   0.0    1.3  1  ATP-grasp        ATP-grasp domain
     0.0087   16.1   0.0       0.02   14.9   0.0    1.6  1  ATP-grasp_3      ATP-grasp domain
  ------ inclusion threshold ------
      0.093   12.5   0.0        0.2   11.4   0.0    1.5  1  ATPgrasp_Ter     ATP-grasp in the biosynthetic pathway with T


Domain annotation for each model (and alignments):
>> CPSase_L_D2  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.7   4.4e+03     129     163 ..       9      43 ..       5      50 .. 0.83
   2 !  234.1   0.0   4.6e-73   1.2e-69       2     210 ..     140     348 ..     139     349 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.7
                  S-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEE CS
  CPSase_L_D2 129 PsqtLtdeerqalreaavkvvrevgvvgagtvefl 163
                  P+  L + + +++ +a+vk +++v + + g +   
   KHJ34084.1   9 PASWLRPCHIRTISSASVKPINSVLIANRGEIAIR 43 
                  89999999999999*****9999999999988655 PP

  == domain 2  score: 234.1 bits;  conditional E-value: 4.6e-73
                  HHHHHHHHHHTT-BBSSEECSSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSSEEEEEEE CS
  CPSase_L_D2   2 kesakealkkinvpvvpssaapvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkgpkeiEvev 99 
                  k+++ke++ ++ vp++p+ ++  ++ e  l+ ak+ig+P +ika  g+GGkGmrv+  e+e+ e +++a +e   +fg++ +l+ek+++ p++iEv++
   KHJ34084.1 140 KSRSKEIMINACVPCIPGYHGSNQDPEFLLNEAKKIGFPLMIKAVKGGGGKGMRVVFYENEFLEKLNSAKSEGINSFGDDVMLIEKYIASPRHIEVQI 237
                  788999******************************************************************************************** PP

                  EEETTS-EEEEEEEEECCECTCCCCEEEES-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEEEETTTTEEEEEEEESS--CCHHHHHHHHS--HHH CS
  CPSase_L_D2 100 lrDakgnvitvcerenslqlrtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpkskeyyviEvNtRlsvesalaekaTGldlvk 197
                    D++gnv+t++er++s+q+r+qk++e+AP++ L +++rq+l e+a  ++ +v++ gagtvef++d++++ +y++E+NtRl+ve++++e +TG dlv+
   KHJ34084.1 238 FGDKHGNVVTLGERDCSIQRRHQKILEEAPAPNLAEDTRQKLWEKARLAALAVKYHGAGTVEFIYDNDTGTFYFMEMNTRLQVEHPVTEFVTGEDLVE 335
                  ************************************************************************************************** PP

                  HHHHHHTT--GCG CS
  CPSase_L_D2 198 eaakialgekLee 210
                  +++++a+ge+L++
   KHJ34084.1 336 WQFRVAAGESLPK 348
                  **********985 PP

>> Biotin_carb_N  Biotin carboxylase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.2   0.0   2.2e-38   5.6e-35       2     110 .]      29     134 ..      28     134 .. 0.98

  Alignments for each domain:
  == domain 1  score: 120.2 bits;  conditional E-value: 2.2e-38
                    --EEEE---HHHHHHHHHHHHHTT-EEEEEEEGGGTTSHHHHHSSEEEEEESSTTCCGGG-HHHHHHHHHHTT-SEEE--SSTTTT-HHHHHHHHH CS
  Biotin_carb_N   2 ikkvlianrGeiAvriiravrelgietvavyseedanslhvreadeavelgpasasesYlniekivkaakesgadavhpGyGflsEnaefaeavee 97 
                    i++vlianrGeiA+r+ r++++lgi+ ++vy+e d +s+h+ ++    +lg   + ++Yl+ e+i+++ake++++a+hpGyGflsEn+efa+++ e
     KHJ34084.1  29 INSVLIANRGEIAIRVGRTASKLGIRCTTVYTESDLKSQHALHSPLNANLG---HISAYLDGEQIISIAKERNCEALHPGYGFLSENSEFARRCIE 121
                    789***********************************************9...7889************************************** PP

                    TT-EESSS-HHHH CS
  Biotin_carb_N  98 agivfiGPsaeal 110
                    +g+vfiGPs+ea+
     KHJ34084.1 122 EGLVFIGPSWEAI 134
                    **********987 PP

>> Biotin_carb_C  Biotin carboxylase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.2   0.0   3.2e-38   8.3e-35       1     107 [.     365     472 ..     365     473 .. 0.97

  Alignments for each domain:
  == domain 1  score: 119.2 bits;  conditional E-value: 3.2e-38
                    EEEEESEETTTTTEE--CE-SEEE--.-STTEEEEE---TT-EE-TTS-SEEEEEEEEESSHHHHHHHHHHHHHT-EEESS-BSHHHHHHHHH-HH CS
  Biotin_carb_C   1 eaRinaEdpeknflpssGkvtelelp.egpgvRvdsgveegsevspyyDsllaKlivhgetreealarlrraLaelrieGvktnieflrailedee 95 
                    e Ri+aE+pe+nf+p+sG++++l++p  + +vR+d+g+ eg+++sp+yD +laKliv ++tr+ a++rl + L+e++i Gv+tniefl++i+++++
     KHJ34084.1 365 ESRIYAENPERNFSPDSGRIRYLRIPkISDHVRLDTGFIEGDTISPAYDGMLAKLIVSAPTRKLAIKRLFTSLQEYEIVGVSTNIEFLKKICQSRA 460
                    78************************55789***************************************************************** PP

                    HHHT---TTTCC CS
  Biotin_carb_C  96 fakgeldtkfle 107
                    f++ge+ t+f++
     KHJ34084.1 461 FIEGEVGTNFIQ 472
                    **********98 PP

>> Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   3.2e-12   8.1e-09      23     174 ..     164     316 ..     155     317 .. 0.84

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 3.2e-12
                      -H-HHHHHHHHHC-SSEEEEESSSSTTTTEEEESSGGGHHHHHHHHHTT......-SCEEEEE--.ESEEEEEEEEETSSCEEEEEEEEE-SSS CS
  Dala_Dala_lig_C  23 ekkellekveeelgypvfVKpareGSSvGvskveseeelkeaieeafky......dekvlvEeai.egreievavlgneklevsevgeivvkkg 109
                      +  e+l ++ +++g+p+++K+++ G   G+  v  e+e+ e +++a +       d  +l+E++i + r iev + g+ + +v ++ge+  +  
       KHJ34084.1 164 D-PEFLLNEAKKIGFPLMIKAVKGGGGKGMRVVFYENEFLEKLNSAKSEginsfgDDVMLIEKYIaSPRHIEVQIFGDKHGNVVTLGERDCS-- 254
                      3.38889999***********************999998888888876433334588899*****999********************9775.. PP

                      SS-HHHHHC.TT-EEESS-.---HHHHHHHHHHHHHHHHHTT--SEEEEEEEE.ETTTEEEEEEEES CS
  Dala_Dala_lig_C 110 fydyeakysddkaqlevpa.klekeveekiqelalkaykaldlrGlaRvDffl.teegeivlnEvNt 174
                      + + ++k        e pa +l +++++k+ e a  a  a++ +G + v f++ +++g++++ E+Nt
       KHJ34084.1 255 IQRRHQKIL-----EEAPApNLAEDTRQKLWEKARLAALAVKYHGAGTVEFIYdNDTGTFYFMEMNT 316
                      445566664.....34444378999999*************************66789********9 PP

>> ATP-grasp  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.0   1.1e-08   2.9e-05      20     159 ..     168     317 ..     155     319 .. 0.79

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 1.1e-08
                 HHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHC........GTTCEEEEE----SEEEEEEEEEETTC-EEE-...-EEEEEEETTEEEE CS
   ATP-grasp  20 leeaaeelglpvvvKarrlgydGkGqsvvrseedleqaleal........keekvivEefvpfekElsvlvvrsaeGetafy...pvvetvqedgilrl 107
                 l + a+++g+p+++K ++ g  GkG  vv  e++  + l+ +        ++  +++E+++   + + v +  +++G+++++   +   + ++++il++
  KHJ34084.1 168 LLNEAKKIGFPLMIK-AVKGGGGKGMRVVFYENEFLEKLNSAkseginsfGDDVMLIEKYIASPRHIEVQIFGDKHGNVVTLgerDCSIQRRHQKILEE 265
                 556789*********.677779*******9999987777777799999999999************************888732233344555677777 PP

                 EEECEE-SCHHHHHHHHHHHHHHHHHTSSEEEEEEEEEETT.CTEEEEEEESS CS
   ATP-grasp 108 svapaevsekaqkkaeeiakkiveeLggvGvfavElFvled.gellvnElapR 159
                   ap  + e+  +k  e a+ ++ ++ + G  +vE+ + +d g+ ++ E+  R
  KHJ34084.1 266 APAPN-LAEDTRQKLWEKARLAALAVKYHGAGTVEFIYDNDtGTFYFMEMNTR 317
                 77777.455677888899999999***********988744145888887766 PP

>> ATP-grasp_3  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   7.9e-06      0.02      25     159 ..     170     319 ..     138     321 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 7.9e-06
                  EESS--SSSEEEEESS-------B--SS--TTE...................EEEE---S.EEEEEEEEE.SSSEEE.EEEEEEEEET....TEEEEE CS
  ATP-grasp_3  25 eeleeeekklvvKprdGaggesvrvveekeeaeaaieeve............lvqefieG.kplSvsllsdgekvlv.lavnrqliekaekefvyaGn 108
                  +e+++   +l +K ++G+gg+++rvv  ++e  +++++ +            l+ ++i + +++ v++ +d++ ++v l   +  i+++++  +    
   KHJ34084.1 170 NEAKKIGFPLMIKAVKGGGGKGMRVVFYENEFLEKLNSAKseginsfgddvmLIEKYIASpRHIEVQIFGDKHGNVVtLGERDCSIQRRHQ-KILEEA 266
                  56667778899***************9999999999999899****************8758999*9999887655404444455555444.555555 PP

                  EES.----HHHHHHHHHHHHHTTSTT--EEEEEEEEESS...SEEEEEEESS-- CS
  ATP-grasp_3 109 vtp.ietelkeevvelaeevvekleglaGyvGvDlvlkd..eepyviEvNPRlt 159
                   +p    + ++++ e a+ +  ++ +  G   v++++ +  +  y++E N Rl+
   KHJ34084.1 267 PAPnLAEDTRQKLWEKARLAALAV-KYHGAGTVEFIYDNdtGTFYFMEMNTRLQ 319
                  5550555559999*****999999.9**********98878899********97 PP

>> ATPgrasp_Ter  ATP-grasp in the biosynthetic pathway with Ter operon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   7.8e-05       0.2      29     114 ..     253     347 ..     220     362 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.8e-05
  ATPgrasp_Ter  29 aavpRrKe....kgglq...el..ekdeelielaerlaeefgldglvnvQvrededg..pkLLEiNpRasGGlgys.alaGvnlpylalklllglet 113
                   + ++Rr +    +       +l  +++++l+e a+  a +++ +g   v + +d+d+   + +E+N+R +    ++ +++G +l+++ ++ + g++ 
    KHJ34084.1 253 CSIQRRHQkileE---ApapNLaeDTRQKLWEKARLAALAVKYHGAGTVEFIYDNDTgtFYFMEMNTRLQVEHPVTeFVTGEDLVEWQFRVAAGESL 346
                   5666766633322...0345551145689****************999999999988789**********999887355799****99999999733 PP

  ATPgrasp_Ter 114 e 114
                   +
    KHJ34084.1 347 P 347
                   3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (655 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 4802.73
//
Query:       KHJ34085.1  [L=613]
Description: putative sas10 utp3 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      8e-28   96.7  11.9      8e-28   96.7  11.9    2.8  3  Sas10       Sas10 C-terminal domain
    1.1e-10   42.0   0.0    1.1e-10   42.0   0.0    2.5  3  Sas10_Utp3  Sas10/Utp3/C1D family


Domain annotation for each model (and alignments):
>> Sas10  Sas10 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1      0.75   6.7e+03      22      22 ..     357     357 ..     337     408 .. 0.53
   2 ?   -3.4   0.1       1.6   1.4e+04      37      50 ..     507     520 ..     502     528 .. 0.50
   3 !   96.7  11.9     9e-32     8e-28       2      74 .]     539     613 .]     538     613 .] 0.98

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.75
       Sas10  22 k 22 
                 k
  KHJ34085.1 357 K 357
                 2 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 1.6
       Sas10  37 ekakkklksqvaev 50 
                  k+ +kl++++ae+
  KHJ34085.1 507 LKKDQKLARKQAEA 520
                 34444444444443 PP

  == domain 3  score: 96.7 bits;  conditional E-value: 9e-32
       Sas10   2 dgkRkityqIekNkGLtpkRkkenrnpRvkkrkkYekakkklksqvaevk..keegkYsGektGIksnvvkSvkL 74 
                 dgkR+i y IekNkGL+pkRkk++rnpRvkkrkkYe++kkkl+s++a +k  +e+g+Y+GektGIk+++vkS+kL
  KHJ34085.1 539 DGKRAIGYVIEKNKGLAPKRKKDVRNPRVKKRKKYEEKKKKLASTRAIYKggEERGGYGGEKTGIKTRLVKSIKL 613
                 8**************************************************99999******************8 PP

>> Sas10_Utp3  Sas10/Utp3/C1D family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.3       1.4   1.3e+04       5      27 ..     115     138 ..     112     162 .. 0.38
   2 !   42.0   0.0   1.2e-14   1.1e-10       1      87 []     212     305 ..     212     305 .. 0.86
   3 ?   -2.6   0.6         1   9.2e+03      14      27 ..     341     358 ..     329     375 .. 0.42

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.4
  Sas10_Utp3   5 sksldelqeslepllsk...akaee.k 27 
                 +k+++e  +s ++  ++   +   +  
  KHJ34085.1 115 NKDIEEWDASKQEYYNHdliE---TeA 138
                 555555555555555542221...111 PP

  == domain 2  score: 42.0 bits;  conditional E-value: 1.2e-14
  Sas10_Utp3   1 leslsksldelqeslepllskakaeekkslsdeklsegisllslKnelllaYllnlllylllk.lsg..............velkdhpvvkeLvrlRvy 84 
                 +++l+++l el + l++l+ ++++e +      +l+   s   lK+++l+aY+ +l++y  ++ +s+               el++h ++++L+++R++
  KHJ34085.1 212 FDPLANDLLELYPVLQKLQVEVENESS------SLTSSNSPTTLKFRALSAYVGTLTMY--FAiISSpgfgssgeahalnpEELREHSIMDTLLQCREL 302
                 578999**************8776663......2233446799****************..77455589***********999**************** PP

  Sas10_Utp3  85 leK 87 
                 ++K
  KHJ34085.1 303 WSK 305
                 *98 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 1
  Sas10_Utp3  14 slepllsk...akaee.k 27 
                 ++++  ++   ak++e +
  KHJ34085.1 341 KIKDSIQSnisAKNKEkS 358
                 444333332222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1547  (0.0862848); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.39
# Mc/sec: 4687.30
//
Query:       KHJ34086.1  [L=395]
Description: putative gdp-mannose transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-09   37.9  22.4      2e-09   37.1  22.4    1.4  1  UAA       UAA transporter family
    0.00015   22.0  10.8    0.00015   22.0  10.8    2.2  2  EamA      EamA-like transporter family


Domain annotation for each model (and alignments):
>> UAA  UAA transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1  22.4   2.3e-13     2e-09      41     299 ..      85     361 ..      54     364 .. 0.77

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 2.3e-13
         UAA  41 lfvalegllesid....i........lkkrkiPlktYvilvalffitsvlnnealkydisvPvhiifrssklipvmilGililgkrYsllqylsvlllt 127
                  ++a+++l++ ++    +        +       kt++ +++l +++  ++ +al++ +svPv +if+   +i      +l+ g + + + + s  l++
  KHJ34086.1  85 FYLAIQSLVCILTivscKqvgmiknlAPFDSKKAKTWFPISILLVGMIYTSTKALQF-LSVPVYTIFKNLTIIVIAYGEVLWFGGSVTASAIFSFGLMV 182
                 23333333222222112022322333444445579**********************.**********9988877777799****************** PP

         UAA 128 lGviiftllsakdk........kedskeslnkfllGiallvlallldavlglvqeklykkygkhskealfyshllslplflllqgellsavkflsesed 218
                 l  +++++++ +          ++ s+e+l+    G+a + ++++++a   l   k+ kk + +  +++fy++ll +p+++l+ + l++ +   + +++
  KHJ34086.1 183 LSSVVAAWADIQHAlyrentqeNSSSHEALSMLNAGYAWMGMNVFCTAAYVLSMRKIIKKMNFKDWDTMFYNNLLTIPVLFLC-SLLFEDWSSHNINKN 280
                 ********8888889***99888888999999999*******************************************98866.568888888888888 PP

         UAA 219 vallslpsklfylllnvltqyvcikgVli.lisefgaltvtlvltlRKfvslllS.illFknpltlqhlvgtllVflglllys 299
                 +  ++    l+  ++++ ++++ i++  +  i+ +++ t ++v  l K+  + +S +++F  p+t+  + + ++ f++ ++y+
  KHJ34086.1 281 FP-INTRNSLILGMIYSGLATIFISYCSAwCIRVTSSTTYSMVGALNKL-PIAVSgLIFFAAPVTFGSVSAIIIGFISGIVYA 361
                 88.5666666666666666666677766525778888899999999886.66666377899************9999999887 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3  14.1    0.0024        21       8     135 ..      57     188 ..      52     190 .. 0.73
   2 !   22.0  10.8   1.6e-08   0.00015       3     131 ..     218     356 ..     216     362 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0024
        EamA   8 llaalfwaiyfvlskil...lrkvspl.tltfvrfliagilllii.allkegklaklslkdwllllllgllgtvlafllffyalkktsasnaslitsle 101
                 +la ++ +i+ +++ +     ++++   +++++++l++ +  +    +   ++la ++ k  +  + +++l + +  +  ++al+ +s+ + +++ +l+
  KHJ34086.1  57 ILAYCMASISMTVTNKYcvsGKYWNLNfFYLAIQSLVCILTIVSCkQVGMIKNLAPFDSKKAKTWFPISILLVGMI-YTSTKALQFLSVPVYTIFKNLT 154
                 5666677777777755523334443332445566665555443332444455558888888888888888766655.5889****************** PP

        EamA 102 PvftlilsvlllgekltlkqllgivlillGvlli 135
                  ++++   vl++g ++t + +++++l++l+ ++ 
  KHJ34086.1 155 IIVIAYGEVLWFGGSVTASAIFSFGLMVLSSVVA 188
                 *****************************98875 PP

  == domain 2  score: 22.0 bits;  conditional E-value: 1.6e-08
        EamA   3 gillallaalfwaiyfvlskillrkvspl..tltfvrfliagillliiallkegkl........aklslkd...wllllllgllgtvlafllffyalkk 88 
                 g+ ++   +++ a+y + ++++++k++     + f+  l+   +l++ +ll+e +         +         ++l ++++ l+t++  ++  + ++ 
  KHJ34086.1 218 GYAWMGMNVFCTAAYVLSMRKIIKKMNFKdwDTMFYNNLLTIPVLFLCSLLFEDWSshninknfPIN---TrnsLILGMIYSGLATIFISYCSAWCIRV 313
                 788888999*****************88777777787777777777776666655555556333344...2554444466666777777789******* PP

        EamA  89 tsasnaslitslePvftlilsvlllgekltlkqllgivlillG 131
                 ts+++ s++ +l  + +++ + +++  ++t+ ++ +i++++++
  KHJ34086.1 314 TSSTTYSMVGALNKLPIAVSGLIFFAAPVTFGSVSAIIIGFIS 356
                 ****************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1017  (0.0567237); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 2933.22
//
Query:       KHJ34087.1  [L=551]
Description: hypothetical protein EV44_g3417 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0015   18.0   0.4     0.0015   18.0   0.4    1.7  2  Golgin_A5       Golgin subfamily A member 5
     0.0029   17.5   0.1       0.29   11.0   0.0    2.9  3  Gag_p24         gag gene protein p24 (core nucleocapsid prote
     0.0069   16.1   0.3        1.4    8.7   0.5    2.8  2  DivIC           Septum formation initiator
  ------ inclusion threshold ------
      0.035   13.9   0.2       0.12   12.3   0.2    1.9  1  betaPIX_CC      betaPIX coiled coil
        1.4    8.8   4.7        2.4    8.1   4.7    1.4  1  zf-CCHC_2       Zinc knuckle


Domain annotation for each model (and alignments):
>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.4   4.3e-07    0.0015      44     208 ..      64     225 ..      56     266 .. 0.79
   2 ?   -3.1   0.1       1.2   4.2e+03       7      38 ..     479     510 ..     475     539 .. 0.68

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 4.3e-07
   Golgin_A5  44 alsaeldelkqerdllreelqklnqqieqlrtelqdleaqqqaeaes.lreqlqeleeqleeerkakeeveaelerlkeelryleeelvrskatlqsri 141
                 + s + d  +++r++l + ++++++  e + ++++d++     e    +++++++++ ++++ +  +e+v+++ e     lry+   l+        +i
  KHJ34087.1  64 EFSRDHDTRTKRRQTLLSLSNAARGDHEPIAKNIDDVDVVDLREYTDwFMNHNTDINLRFDSANTLNEAVNQQPETWFLFLRYMTHSLH----YADLHI 158
                 55667777788888888888889999999999999999988888655168889999999999999999999999999999999999998....667788 PP

   Golgin_A5 142 kdrekeieklrnqlttkslsssseselesRlkqLtesLiqKQtvlEalsteknslvlQLeRleqqik 208
                 + +++ei++lr        s+s  +    + k+  +++i+    +Eals e++ l l LeRl+ q  
  KHJ34087.1 159 EAQNTEIDNLRTTNEDLCSSNSPATITILKKKKYRDTIIRLREEVEALSKERDNLKLSLERLNIQGD 225
                 8999*****9987776666666666666677999****************************98754 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.2
   Golgin_A5   7 qeledYKqkAarILQsKekliasLkegsgeeg 38 
                 +el+dY++   r    K++li++ + +   ++
  KHJ34087.1 479 KELKDYRNSLPRSNIIKQRLIDEKRCHRCMQK 510
                 78888888877777778888877665554443 PP

>> Gag_p24  gag gene protein p24 (core nucleocapsid protein)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.022        78      16      70 ..      21      76 ..      14     113 .. 0.79
   2 ?   -2.4   0.0         1   3.6e+03      90      90 ..     230     230 ..     167     290 .. 0.62
   3 !   11.0   0.0     8e-05      0.29     109     148 ..     346     385 ..     337     395 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.022
                TT-TTHHHHHHHHCTT-.-HHHHHHHHHH--S-HHHHHHHHHHHHHHHHHHH---- CS
     Gag_p24 16 psspeviqlidalaeqa.lpkdlekllarvgssqlaaqlwkeeleeeekdrvnraa 70
                   p +i  +d++ e   ++k +  +la+ + +  ++ + ++e ++++ d++ +  
  KHJ34087.1 21 NHRPSFIDQLDSVPETElITKKDVLQLATHCCNVYDYWMNHQEEFSRDHDTRTKRR 76
                56699999999999877788888888888888899999999998888776666544 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1
                 H CS
     Gag_p24  90 q 90 
                 +
  KHJ34087.1 230 D 230
                 3 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 8e-05
                 HHHHHHHHHH--S.-CCC----TT--HHHHHHHHHHHHHH CS
     Gag_p24 109 lalekiprsgsktesladirQGpkEpyqdfvaRlekalrk 148
                 +a+++       +++l ++r G++E++ df a++++ ++k
  KHJ34087.1 346 RAFRAYDMRRDAKTKLETLRMGNNESFGDFFAKFQIQINK 385
                 677777777777789********************99987 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0     0.011        41      12      43 ..     144     175 ..     140     178 .. 0.80
   2 !    8.7   0.5   0.00039       1.4      16      52 ..     186     221 ..     183     234 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.011
                 XXXXXXHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       DivIC  12 gkkgllaykqlkqeiaalqaelaklkaeneeL 43 
                 + +  ++++  +  i+a++ e+++l+ +ne+L
  KHJ34087.1 144 LRYMTHSLHYADLHIEAQNTEIDNLRTTNEDL 175
                 555566666677789***************98 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00039
                 XXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XX CS
       DivIC  16 llaykqlkqeiaalqaelaklkaeneeLeaevkdLks 52 
                 +l+ k+ +  i +l +e+++l++e+++L+  +++L +
  KHJ34087.1 186 ILKKKKYRDTIIRLREEVEALSKERDNLKLSLERL-N 221
                 56677888999*******************99999.5 PP

>> betaPIX_CC  betaPIX coiled coil
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.2   3.2e-05      0.12      13      60 ..     172     219 ..     162     221 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.2e-05
  betaPIX_CC  13 eekiiveelksnqtvleekslVDtVYaLkdevqelkqenkklkkslee 60 
                 +e ++  +     t+l+ k   Dt+  L++ev+ l +e  +lk sle+
  KHJ34087.1 172 NEDLCSSNSPATITILKKKKYRDTIIRLREEVEALSKERDNLKLSLER 219
                 56666666666679999***************************9996 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   4.7   0.00067       2.4       6      14 ..     504     512 ..     503     512 .. 0.96

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00067
   zf-CCHC_2   6 ChiCgkkGH 14 
                 Ch+C +kGH
  KHJ34087.1 504 CHRCMQKGH 512
                 ********* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (551 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       804  (0.0448435); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3879.63
//
Query:       KHJ34088.1  [L=484]
Description: putative formyl-coenzyme a transferase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   4.8e-119  397.8   0.0   5.5e-119  397.6   0.0    1.0  1  CoA_transf_3  CoA-transferase family III
  ------ inclusion threshold ------
       0.11   12.7   0.1       0.19   11.9   0.1    1.3  1  ABC_cobalt    ABC-type cobalt transport system, permease comp


Domain annotation for each model (and alignments):
>> CoA_transf_3  CoA-transferase family III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  397.6   0.0  6.2e-123  5.5e-119       1     368 []      81     459 ..      81     459 .. 0.98

  Alignments for each domain:
  == domain 1  score: 397.6 bits;  conditional E-value: 6.2e-123
  CoA_transf_3   1 LaGvrVldlsqvlaGplatslLAdlGAeVIkvEppkkgDpaRkvgpsee..........kgesayflavnrnKrsvalDlkseegrellkrLvakAD 87 
                   L+G+rVldl++vlaGp++t+lL+dlGAeVIkvE+p +gD++R++gp +            gesayflavnrnK+s+al +k+e+g ++l++L+ ++D
    KHJ34088.1  81 LQGFRVLDLTRVLAGPYCTQLLGDLGAEVIKVEHPTRGDDTRQWGPPFAayqegsgrlgPGESAYFLAVNRNKKSLALSFKQEAGVKILQKLASESD 177
                   89*********************************************999*********************************************** PP

  CoA_transf_3  88 VvieNfrpgvlerlglgyeelrainPrLiyasvsgyGqsGpkakrpgyDlvaqaasGlmsltgepdgpPvkvgvplgDivtgllaavailaallare 184
                   +++eN+ p +l+++gl+y +l++inPrLiyas++gyGq+Gp+++r+gyD++++a +Glm++tg ++gpPvkvgv+++D +tgl+a+++i+aa++ r 
    KHJ34088.1 178 ILVENYLPNTLKKYGLDYTTLQKINPRLIYASITGYGQTGPYRSRAGYDVMVEAGFGLMHITGPKNGPPVKVGVAVTDLTTGLYASNSIMAAIIVRA 274
                   ************************************************************************************************* PP

  CoA_transf_3 185 rtGkGqvidvslleaalallapqlleylatgevperq.gnrdpaaapygvyrtkdgwvaiaaatdkqwaalckalgrpelaedprfatnasrlenra 280
                   +tG Gq id++l +  +a+l++ +   l +ge    + g ++p++ py+ ++tkdg + ++ ++++ +  +c+ + +pel++d rf +n sr++nr 
    KHJ34088.1 275 KTGMGQYIDLALSDCQVATLSNIASSCLISGENDDGRwGTAHPSIVPYRSFKTKDGEILLGGGNNHLFGLICDGIKQPELKTDCRFIDNVSRVTNRY 371
                   ************************99977777766455*********************************************************** PP

  CoA_transf_3 281 eldaelaewlaertaaewlellaaagvpaapvntleevlddpqlaarglvvevddpdygevpvvglpvrlsetparvkraaPklGedt 368
                   el+  +++++ ++t+  wl+l++  g+p++++++++ +l+++++ arg+++e+++   g++++ ++p+++s+ ++r+++a+P lGe+t
    KHJ34088.1 372 ELESIIESVTLTETTRYWLNLFEGSGLPCSEIRDIKNTLSNEHVLARGMIEEIEHNFCGPIKLLNIPMKFSQSRPRIRSAPPILGEHT 459
                   ***************************************************************************************8 PP

>> ABC_cobalt  ABC-type cobalt transport system, permease component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   2.1e-05      0.19      35      87 ..     248     305 ..     227     326 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.1e-05
                 G.....GGGGGGGGGHHHHHHHHHH-.STTHHHHHHHHHHHHHHHTT-TTTTHHHHHH CS
  ABC_cobalt  35 g....aealllGlWllagvlaaliir.kpgaallaellaAlvemllgsqwGastllsg 87 
                 +    +++l++Gl+    ++aa+i+r k g + +  l  +  ++++ s++  s+l+sg
  KHJ34088.1 248 KvgvaVTDLTTGLYASNSIMAAIIVRaKTGMGQYIDLALSDCQVATLSNIASSCLISG 305
                 1444489******************9899****************9999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (484 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       368  (0.0205254); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3640.87
//
Query:       KHJ34089.1  [L=467]
Description: putative 1-aminocyclopropane-1-carboxylate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-44  153.1   0.0    1.4e-44  152.8   0.0    1.0  1  Aminotran_1_2  Aminotransferase class I and II


Domain annotation for each model (and alignments):
>> Aminotran_1_2  Aminotransferase class I and II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.8   0.0   7.7e-49   1.4e-44      31     363 .]      63     421 ..      40     421 .. 0.86

  Alignments for each domain:
  == domain 1  score: 152.8 bits;  conditional E-value: 7.7e-49
                    HHHHTSTTST-BTTHHHHHHHHHHHHHC..TCTTCHTTGGEGEEEESHHHHHHHHHHHHHHHTTT-EEEEEESS-THHH.HHHHHTTSEEEEEEBE CS
  Aminotran_1_2  31 alaggtlneygpidglpeleealakflg..rseklklkreaavvvgsGagaliealifllklnpgdeilvpdptyasyk.nilrlsggevvryply 123
                    ++ + +   y+ + g p++   +a++++   s++++++ + ++++gs  +a++++l+f + +++gd ilv++pty+ ++ ++   +++++++  ++
     KHJ34089.1  63 VQITASSFDYSCNNGGPKFPGLMASYINtyFSPYVPITSD-NLITGSSVSAIQSMLAFSI-ADKGDGILVSRPTYGRFEiDYYTSARVKIIYADMD 156
                    44666667788888999999999*999999899*******.*******************.9****************626778889999999999 PP

                    ETTTTEE-H.HHHHHHHTTHHCTTETEEEEEEESS-TTT--B--HHHHHHHHHHHHHTTEEEEEEETTTTCBSSSSHTHHH........HGGSTTS CS
  Aminotran_1_2 124 seedfhldl.ealeealkeapegnkktkvilvesphNPtGtvatleeleklldlakkynlllfvDeaYagfvfgsldavat........ranveee 210
                      ++f+  + e +e a ++a+   + +k++l+++p+NP G  +++e+l++l++++++++++l++De+Ya  vf  +   +t          n e+ 
     KHJ34089.1 157 GVDSFSPSVvERFELAFNRAQIYGVSIKGLLIANPSNPLGHCYPRETLKALMAFCQRHKIHLLSDEIYALSVFSVPN--STsplftsalSINTENL 250
                    99999987527899999**999999************************************************9663..33455666563344443 PP

                    TT...EEEEEESSSTTSSGGG-EEEEEE.EHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTEEEECC CS
  Aminotran_1_2 211 pn...llivgslsKafGlaGeRvGyilg.naavvsqlrklsrpflsssllqaavaaalsdallkqseleemrqrlqkrrkelrdeLaelglkvlas 302
                    ++   ++++++lsK+fGlaG+ +G+++  n+ + s+ + l r+  ss +  +++ a+l+ ++++++ l  +r+r+ + +k  +  L+++g++++  
     KHJ34089.1 251 IDpnlVHVLYGLSKDFGLAGFKLGCLITcNKSLQSCCKTLLRFHGSSGPSLQIACAILEQPDFVRDLLALSRERIREGHKITTRVLDAAGIPYYRG 346
                    44789********************9999***************************************************************9987 PP

                    S.CSSEEEEEETHH...........CHHHHHHH.HHHTCTEEEEEGGGGTS.TTEEEEECTTS-HHHHHHHHHHH CS
  Aminotran_1_2 303 q.sgmflltdlsae...........takelskk.Lleevgvyvtpgtsftv.pgrlRitvAglteeeleelveal 363
                      +g+fl++ ls++           ++ e++ +  ++ +gv + p ++    pg++R+ + +++ ++l+  +++l
     KHJ34089.1 347 GnAGFFLYMNLSRYlknwdqkeegiEDPEFALAkHIKDHGVFLHPREEHSEvPGWFRLVFTSMPYDDLKIGLDRL 421
                    66************8888877777755555544667777******6666558********999999999888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3389.13
//
Query:       KHJ34090.1  [L=312]
Description: putative nicotianamine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-43  148.3   0.5    3.1e-43  148.1   0.5    1.0  1  NAS              Nicotianamine synthase protein
    2.3e-06   27.5   0.1    6.4e-06   26.0   0.0    1.7  2  Methyltransf_31  Methyltransferase domain


Domain annotation for each model (and alignments):
>> NAS  Nicotianamine synthase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.1   0.5   3.5e-47   3.1e-43       4     271 ..      28     309 ..      23     312 .] 0.88

  Alignments for each domain:
  == domain 1  score: 148.1 bits;  conditional E-value: 3.5e-47
         NAS   4 ksealvkkildlyeaiskLeslspseevnaLFtdLvtacitrspvdvtk..lg.qevqeileeLirlcseaeglLeshyskllaafe.....nPldhle 94 
                 + ++l+kkil++++++++ e+l+p  evn+L++dLv+ c+ +++ + ++  l+ +++ +il++L+++cs  e + e+h+s   a +e        + +e
  KHJ34090.1  28 EANVLIKKILHIHAELASKEDLEPCAEVNELYSDLVDICTLPVTEEFSNmiLEnDKILKILHDLRNFCSIIEFNTEKHWSIKAAGTEdvteqAVCKCIE 126
                 3789**************************************99999997676799************************666655412111456789* PP

         NAS  95 iFPyyknYlkLsklEyellskkvtevPtkvaFiGsGPlPltslvlaskhls...ktifdnlDkdglandkasklvsadedlssrmsfhtadvldvteel 190
                 + P+ +  ++L+  E+ ++    ++  + +a +GsGPlPlt l l         ++ + n+D++ +a + a+kl++++   ++ m f  a++ + + +l
  KHJ34090.1 127 NIPHIDINMELISDELSAMRVVSQKLIESIAIVGSGPLPLTGLGLTGMLFGtstDIRILNIDRELNAIEAAKKLCNRLGSKAKGMEFLCAEAGS-AIHL 224
                 ******************9999999999***************9985544333388999********************************987.678* PP

         NAS 191 kaydvvflAAlvGmakeeKakviehlakkmakGavlvlrsahGarafLypvvdpe..dlk.gfevlavihPede.vinsvivark 271
                 +++dvv+lA lvG +++eK+ ++++l+ +m +Ga+l++r+   ++ ++y+v+dp+   +   ++v +vi P++  ++ +v ++r 
  KHJ34090.1 225 SEFDVVYLAILVGNTQQEKELLLKNLVSEMRPGALLIVRGTTKLKRLMYSVFDPNtkPVAqILDVETVIYPKNHyIVDTVTIGRV 309
                 *****************************************************996433369*********96537899999884 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.25   2.2e+03      85     103 ..      76      94 ..      40     148 .. 0.59
   2 !   26.0   0.0   7.1e-10   6.4e-06      27     119 ..     180     272 ..     171     300 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.25
  Methyltransf_31  85 naladpdkileeiervlkp 103
                      n + ++dkil+ ++++ + 
       KHJ34090.1  76 NMILENDKILKILHDLRNF 94 
                      4444444444444333332 PP

  == domain 2  score: 26.0 bits;  conditional E-value: 7.1e-10
  Methyltransf_31  27 pkaevvGiDiseeaielArenaqklgld..nveFeqgdiee.leklledekfDlilsnevl.naladpdkileeiervlkpggilliedprlla 116
                      +++++ +iD++ +aie A++ + +lg++   +eF  +++ + +   l  + fD++    ++ n++ +++  l+++ + ++pg  l+++    l+
       KHJ34090.1 180 TDIRILNIDRELNAIEAAKKLCNRLGSKakGMEFLCAEAGSaIH--L--SEFDVVYLAILVgNTQQEKELLLKNLVSEMRPGALLIVRGTTKLK 269
                      5789***********************999***********666..3..57****9965559*********************99998766444 PP

  Methyltransf_31 117 elp 119
                      +l 
       KHJ34090.1 270 RLM 272
                      444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       580  (0.0323498); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2273.53
//
Query:       KHJ34091.1  [L=335]
Description: putative 3-oxo-5-alpha-steroid 4-dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-20   72.1   2.7    6.2e-14   52.2   0.1    3.1  3  Steroid_dh  3-oxo-5-alpha-steroid 4-dehydrogenase
  ------ inclusion threshold ------
      0.039   13.5   0.0       0.11   12.0   0.0    1.7  1  DUF1295     Protein of unknown function (DUF1295)


Domain annotation for each model (and alignments):
>> Steroid_dh  3-oxo-5-alpha-steroid 4-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.1      0.38   3.4e+03      81      97 ..      70      86 ..      23     114 .. 0.61
   2 !   18.5   0.0   1.6e-07    0.0015       3      72 ..     130     219 ..     128     226 .. 0.88
   3 !   52.2   0.1   6.9e-18   6.2e-14      68     149 ..     250     334 ..     238     335 .] 0.91

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.38
  Steroid_dh 81 lFelvsapnyfgEilew 97
                l+ lvs p    Ei + 
  KHJ34091.1 70 LYCLVSIPSKNAEITSS 86
                44444444444444433 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 1.6e-07
  Steroid_dh   3 mpllivakavlfcvlnGllqarylsyyqpy....................aedylkkdrlllgivlfvlgmliniksdiiLrelrkeget 72 
                 + + i++ a++f ++nG+  + +l+ y p                       +++ ++r  lgi++++lg+ +ni+ d  Lr++r++ ++
  KHJ34091.1 130 IHISIWISAIIFQLMNGISIGGFLAGYGPAitadmtksailpgsnksqvdWLQIASRWRRELGIFIWALGFATNIYHDEVLRDIRRPIKK 219
                 67899********************999999999**********9995544456678999***********************9998765 PP

  == domain 3  score: 52.2 bits;  conditional E-value: 6.9e-18
  Steroid_dh  68 kegetkykiprgglFelvsapnyfgEilewigyalvtksl..aalaFalftvlnltvraaahhkwykkkf.ekYpksRkiliPfv 149
                 +  ++ ykip+ glF+++ +p+y+ E +ew g+ ++  sl  +a +F +  ++++ +ra++  +wy ++f ++    R+++iP +
  KHJ34091.1 250 HCVNKLYKIPQKGLFQFILFPHYLCEWIEWSGWWIAGGSLffPARTFLINEITTMLPRAIQGRNWYIERFgKEHLAGRRAIIPGL 334
                 556889******************************9985449***************************999999*******86 PP

>> DUF1295  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.2e-05      0.11     122     184 ..     190     287 ..     173     306 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.2e-05
     DUF1295 122 viglalwlvgivlealaDqQlsaf...................................kkdpankgkvldsGLwrysRHPNYfgealiWwglflial 184
                  +g+ +w +g++ +++ D+ l +                                    k+  +   k+ ++GL+++   P Y+ e++ W g ++++ 
  KHJ34091.1 190 ELGIFIWALGFATNIYHDEVLRDIrrpikkegvnpeeaekhkigslgqekigkqisgkeKHCVNKLYKIPQKGLFQFILFPHYLCEWIEWSGWWIAGG 287
                 5677777777777777777777777777777777777777777777777777777776555555566799**********************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (335 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2426.07
//
Query:       KHJ34092.1  [L=482]
Description: putative mip family channel protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-50  170.6  17.2    5.4e-50  170.2  17.2    1.1  1  MIP       Major intrinsic protein
  ------ inclusion threshold ------
        1.2   10.0  13.7        1.2   10.0   4.8    2.5  2  HXXEE     Protein of unknown function with HXXEE motif


Domain annotation for each model (and alignments):
>> MIP  Major intrinsic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.2  17.2     6e-54   5.4e-50       8     227 .]     223     440 ..     216     440 .. 0.88

  Alignments for each domain:
  == domain 1  score: 170.2 bits;  conditional E-value: 6e-54
                 HHHHHHHHHHHHHHHHHHHH.HHHCCCSSCSSSSTTSS...HHHHHHHHHHHHHHHHHHHHHHHCHT-S-SHHHHHHHHHTTSSSHHHHHHHHHHHHHH CS
         MIP   8 lravlAEflatlllvfigvg.salnvkkkvsslaslvs...vtleavalafglalavlvylaagiSGaHlNPavTlallvarkisllrailYivaQllG 102
                 l a+l Ef++t++++f+g + +++  +  +s ++ + +     ++ +++ fg++l v v ++  iSGa +NPavTlal++++ ++++ra++ + aQ++G
  KHJ34092.1 223 LVAALGEFVGTTMFLFFGFAgAQV-TNLGTSGNGGNSKfdiAVYLYISFIFGFSLLVNVWIFYRISGAQFNPAVTLALVLVGAVPIVRAVMIFFAQIIG 320
                 668899*************97544.2222222232333346678889999************************************************* PP

                 HHHHHHHHHHHCHHHHHHTTTTSSSSSTTSSHHHHHHHHHHHHHHHHHHHHHHCSTTSSSSTCHGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHH CS
         MIP 103 aivaaallklltkglesraglfanslkpglsagqalvvEiiltfvLvlvvfaltddkrkvslgelaplaigllvaliilvgipltGaamNpArslgpav 201
                 ai+a+al+ +l+          +nsl +g+s++q++++E +lt+ Lv++++ l+++k++++   lap+ ig+++++ +lvgi++tG ++NpArs+gp v
  KHJ34092.1 321 AITASALVMVLFPLP----LSVRNSLGSGTSVLQGVFIEALLTAELVFTILMLAKEKHRAT--FLAPIGIGFALFIAHLVGINFTGSSLNPARSFGPCV 413
                 *********999885....66778899***************************9999988..89********************************** PP

                 HHTHST.TTTHHHHHHHHHHHHHHHHH CS
         MIP 202 vlnkfe.dhwvylvGPliGailgalvY 227
                 v+ +fe +hw+y+vGP++Ga+++   Y
  KHJ34092.1 414 VTGTFEdEHWIYWVGPVLGALIAVAFY 440
                 ****9626**************98776 PP

>> HXXEE  Protein of unknown function with HXXEE motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   5.6     0.089     8e+02      33      80 ..     263     308 ..     234     338 .. 0.58
   2 ?   10.0   4.8   0.00013       1.2      43      99 ..     352     416 ..     311     419 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.089
       HXXEE  33 avaee..filvlvlvvnallvwlil.alallakrepllglallafllvnll 80 
                 av     fi+ + l vn++++   + + +  a+ +p+++lal++++ v ++
  KHJ34092.1 263 AVYLYisFIFGFSLLVNVWIF---YrISG--AQFNPAVTLALVLVGAVPIV 308
                 333221255555555555555...53444..47888888888777777652 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00013
       HXXEE  43 vlvvnallvwli.lalallakrepllglallafllvnlltHiaqalvl.......ksYnPGlvTa 99 
                 v++ + l++ l+  +l l+ +++++++la ++++++++++H++   ++       +s+ P +vT+
  KHJ34092.1 352 VFIEALLTAELVfTILMLAKEKHRATFLAPIGIGFALFIAHLVGINFTgsslnpaRSFGPCVVTG 416
                 444455555566458888999********************888888866666666667777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       681  (0.0379832); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3613.61
//
Query:       KHJ34093.1  [L=425]
Description: hypothetical protein EV44_g3467 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.027   14.4   5.1       0.21   11.5   0.2    2.4  2  Peptidase_S49  Peptidase family S49
      0.062   13.1  21.2      0.029   14.2   9.2    2.4  2  ERM            Ezrin/radixin/moesin family
        1.1    9.3   5.0        1.2    9.2   0.9    2.5  2  DUF2433        Protein of unknown function (DUF2433)
        1.9    9.0  15.9        0.2   12.1   9.0    2.5  3  DUF3106        Protein of unknown function (DUF3106)


Domain annotation for each model (and alignments):
>> Peptidase_S49  Peptidase family S49
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.8    0.0078        35      40     116 ..      95     168 ..      89     194 .. 0.77
   2 ?   11.5   0.2   4.8e-05      0.21      75     114 ..     318     357 ..     312     363 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0078
                    E---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--.HHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHC CS
  Peptidase_S49  40 gsiGvitqllnlenlldklgvevqvvkaGeyksavslrrelt.eeereilqrlldetyqqFvqtVaknRnlsveqvdk 116
                    +s G+  +++n en+++++    ++v+   +ksa+s++++l  + ++e +q++  +  +q+ q++++ +    e++++
     KHJ34093.1  95 DSTGLTEEKMNEENFIKRQ----KLVQGAPLKSAISVFSDLRlKSQKEVIQERHTAAAEQYRQKISERKAKMEEEMNS 168
                    7888888888888888886....5789999*****888887537899999***************9988655555555 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 4.8e-05
                    CTTSS--HHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHH CS
  Peptidase_S49  75 slrrelteeereilqrlldetyqqFvqtVaknRnlsveqv 114
                     + +e++e+er+ l+++l+++ ++ v++V+k+R+++ + +
     KHJ34093.1 318 EIANEVQEDERKRLEKELEKIKEIMVEKVKKEREIEEKTL 357
                    578999****************************998776 PP

>> ERM  Ezrin/radixin/moesin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   9.2   6.5e-06     0.029      78     151 ..     139     211 ..      99     287 .. 0.69
   2 ?    4.6   4.1    0.0055        25      63     132 ..     314     355 ..     300     372 .. 0.55

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 6.5e-06
         ERM  78 eklerklreaeleaarleeeserkeeeaerLkeeleeareaeeeakekllealstpsks....eseenveeseteeee 151
                    er +++ae+  +++ e + + eee++ +++ele+++ + + +++kll+ ++  ++     +     + s+++ +e
  KHJ34093.1 139 VIQERHTAAAEQYRQKISERKAKMEEEMNSWQAELEATESKAKSKSQKLLKQMKVDNRFptswS-----RYSSHDRTE 211
                 34588999999999***************************************99954343321.....222222222 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0055
         ERM  63 iqrlkesaekeeeekeklerklreaeleaarleeeserkeeeaerLkeeleeareaeeeakekllealst 132
                 ++ +++++e +e e+++le++l++ ++ +                             e+ +k +e+ ++
  KHJ34093.1 314 MTDIEIANEVQEDERKRLEKELEKIKEIM----------------------------VEKVKKEREIEEK 355
                 44555555555555555555555544433............................2222222222222 PP

>> DUF2433  Protein of unknown function (DUF2433)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.9   0.00027       1.2      13      68 ..     147     204 ..     142     267 .. 0.81
   2 ?    1.1   0.2     0.089     4e+02      39      76 ..     319     356 ..     312     372 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00027
     DUF2433  13 sleayrsklakskakfaevwetvkkeveaaid..eaqrklLenalevvekiPtiakee 68 
                   e+yr+k++++kak++e  ++ ++e+ea+ +  +++++ L + ++v ++ Pt+ ++ 
  KHJ34093.1 147 AAEQYRQKISERKAKMEEEMNSWQAELEATESkaKSKSQKLLKQMKVDNRFPTSWSRY 204
                 579***************9999999999555446777788888999******987733 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.089
     DUF2433  39 veaaideaqrklLenalevvekiPtiakeeakkneast 76 
                 + ++++e++rk Le+ le +++i +++ +++++ e++t
  KHJ34093.1 319 IANEVQEDERKRLEKELEKIKEIMVEKVKKEREIEEKT 356
                 44778899999999999999998877775555444444 PP

>> DUF3106  Protein of unknown function (DUF3106)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0         4   1.8e+04      32      47 ..      37      52 ..      32      54 .. 0.66
   2 ?   12.1   9.0   4.6e-05       0.2      22      99 ..     136     212 ..     124     215 .. 0.83
   3 ?    0.0   0.4      0.27   1.2e+03      41      61 ..     324     344 ..     314     358 .. 0.52

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 4
     DUF3106 32 eiaerykkltpeeqkr 47
                ei ++++++ +e+ k+
  KHJ34093.1 37 EIESTFDRMVNEDEKK 52
                6667777777766655 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 4.6e-05
     DUF3106  22 lspeqreklleiaerykkltpeeqkrlqermeewakLspeqreqarenyqk.lkqLppeereelrekweeyqkLppeer 99 
                  ++  +e+  + ae+y++   e +++++e m++w++  ++  ++a+++ qk lkq+  ++r  +  +w++y++  + er
  KHJ34093.1 136 QKEVIQERHTAAAEQYRQKISERKAKMEEEMNSWQAELEATESKAKSKSQKlLKQMKVDNR--FPTSWSRYSSHDRTER 212
                 56667899999***********************98666666677766666167*******..********98766665 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.27
     DUF3106  41 tpeeqkrlqermeewakLspe 61 
                 +++e+krl++ +e+ +++  e
  KHJ34093.1 324 QEDERKRLEKELEKIKEIMVE 344
                 333444444444433333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2917  (0.162697); expected 358.6 (0.02)
Passed bias filter:                      706  (0.0393775); expected 358.6 (0.02)
Passed Vit filter:                        90  (0.0050198); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.41
# Mc/sec: 3110.40
//
Query:       KHJ34094.1  [L=491]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.026   14.6   0.5      0.026   14.6   0.5    2.0  2  ArfGap          Putative GTPase activating protein for Arf
        8.5    6.3  10.7       0.17   11.8   1.0    2.6  2  zf-CCHC_6       Zinc knuckle


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.33   2.9e+03      71      89 ..      34      52 ..      26      64 .. 0.78
   2 ?   14.6   0.5   2.9e-06     0.026      15      97 ..     240     320 ..     229     330 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.33
                HTCHHHHHHHHTTTC-TTT CS
      ArfGap 71 algNkkaneileaklpkee 89
                ++gNk++ +++ + +++++
  KHJ34094.1 34 STGNKNVSRVFDKDNSSKP 52
                6899999999999886554 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 2.9e-06
                 B-TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG-TTCGH CS
      ArfGap  15 vCaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekrsksssk 97 
                  C +Cg+++ +   l ++v+ C +C g Hrs  ++    r ++    ++e+l++ ++ g+++++++l ak+ +e   +++s++
  KHJ34094.1 240 SCGNCGSTNLS-KDLYMAVTKCRNCGGLHRSD-SRRCLARPTRSGAPTKEQLKTYRQAGEREFHALLRAKVAEEFVATAESTN 320
                 68888877765.467788999**********8.667788999999**************************888777554444 PP

>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   1.1      0.12   1.1e+03       4       8 ..     241     245 ..     237     247 .. 0.85
   2 ?   11.8   1.0   1.9e-05      0.17       3      19 ..     259     274 ..     258     290 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.12
   zf-CCHC_6   4 CknCG 8  
                 C+nCG
  KHJ34094.1 241 CGNCG 245
                 ****9 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 1.9e-05
   zf-CCHC_6   3 KCknCGAFGHtarSkrC 19 
                 KC+nCG + H+  S+rC
  KHJ34094.1 259 KCRNCGGL-HRSDSRRC 274
                 9******9.******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       647  (0.0360868); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3642.13
//
Query:       KHJ34095.1  [L=359]
Description: putative farnesyl pyrophosphate synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-90  302.3   0.0    2.7e-90  301.9   0.0    1.2  1  polyprenyl_synt  Polyprenyl synthetase


Domain annotation for each model (and alignments):
>> polyprenyl_synt  Polyprenyl synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  301.9   0.0   1.5e-94   2.7e-90       2     255 ..      48     311 ..      47     312 .. 0.95

  Alignments for each domain:
  == domain 1  score: 301.9 bits;  conditional E-value: 1.5e-94
                      HHHHHHHHHHHHSSS--HHHHHHHHHHHHHSCG...HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEETTEE-HHHC..TCHHHHHHHHHHH CS
  polyprenyl_synt   2 elleealeylveagGKrlRpllvllaaealkee...eeelekaavlawivellhaasLvhDDimDdsetRRGqpcahrl..vGnklAindgdfl 90 
                      ++++++l+ +v  gGK +R+++v +++ ++ e    +e++++aa+l+w++ell+a++Lv+DDimD s+tRRG+pc++r+  vG++ Aind+++l
       KHJ34095.1  48 QWYKAVLHANV-IGGKCNRGMSVPDSVSLIMEAplsDEQYFQAATLGWMTELLQAFFLVSDDIMDGSITRRGAPCWYRQpkVGMI-AINDAFLL 139
                      89*********.******************944566679****************************************99****.******** PP

                      HHHHHHHHHHHH..STT.HHHHHHHHHHHHHHHHHHHHHH...HHTTTTTCCC.SHHHHHHHHHHHTH.HHCHHHHHHHHHHTTHHH.HHHHHH CS
  polyprenyl_synt  91 larafellaklf..eks.lellelfsevllqtveGqlldl...eeekdddlskfsleeyleivkyKTa.ylfalpvalaallagasd.eeleal 176
                      ++ +++ll+k+f  ++s +el+elf+ev++qt++Gql+dl   + e++ dl++f++++y+ iv yKTa y+f+lpvala++  g+++ ++l+++
       KHJ34095.1 140 ESSIYILLKKYFrsHPSyIELVELFHEVTFQTEIGQLCDLltaP-EDKIDLDNFTMSKYQFIVIYKTAyYSFYLPVALALYQQGIATiKNLKQA 232
                      ************996667*********************97744.4579***********************************998899**** PP

                      HHHHHHHHHHHHHHHHHHHHHS-HHHHSS-TSHHHHTT---HHHHHHHHCT-HHHHHHHHHHTT.SSHHHHHHHHHHHHH CS
  polyprenyl_synt 177 kdiglelGlaFQiqDDylDlfgdpevlgKpagtDiqegkctlpilkalelaspeqrkvlkeilg.kkaekeedvkealel 255
                      + i+ +lG++FQiqDDylD fg pe++gK+ gtDi ++kc+++i++al  ++peqrkvl+e++g k+++ke +vke++++
       KHJ34095.1 233 EAILIPLGEYFQIQDDYLDNFGLPEHIGKI-GTDIMDNKCSWLINQALSICTPEQRKVLEENYGrKDKAKEMKVKELFDE 311
                      ******************************.*********************************99999999****9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       736  (0.0410508); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2728.22
//
Query:       KHJ34096.1  [L=215]
Description: putative cfem domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-12   47.0   6.5    3.2e-12   46.4   6.5    1.3  1  CFEM      CFEM domain


Domain annotation for each model (and alignments):
>> CFEM  CFEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.4   6.5   1.8e-16   3.2e-12       2      66 .]      21      87 ..      20      87 .. 0.96

  Alignments for each domain:
  == domain 1  score: 46.4 bits;  conditional E-value: 1.8e-16
                TTTS-GGGTCGGG---TT.SS..S-TT-HHHHHH-HHHHHHHHHHHHHH--THHHHHHHHHHHHHHH CS
        CFEM  2 lsalPkCaqdClaeavkk.ss.gCakddtaCiCtnaklqseitdCvtaaCtaeealaavnaasslCa 66
                 ++lP+C++ C++++++k ++ gCa  d aC+C++ ++   ++dC  + C+a++   ++++++s+C+
  KHJ34096.1 21 FQSLPDCGKLCVNNMLAKaKElGCADGDAACLCSKVDFSYGVRDCSIDVCGAQQIAPIIAYTESYCK 87
                589*************997779********************************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1699.46
//
Query:       KHJ34097.1  [L=540]
Description: putative alpha-mannosyltransferase alg11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.9e-81  271.1   0.3    1.6e-80  270.1   0.0    1.7  2  ALG11_N          ALG11 mannosyltransferase N-terminus
      5e-21   75.0   0.0    8.3e-21   74.3   0.0    1.3  1  Glycos_transf_1  Glycosyl transferases group 1
    7.5e-12   45.8   0.0    2.2e-11   44.3   0.0    1.8  2  Glyco_trans_1_4  Glycosyl transferases group 1
  ------ inclusion threshold ------
       0.14   12.2   0.0        0.2   11.6   0.0    1.4  1  Glyco_transf_4   Glycosyltransferase Family 4


Domain annotation for each model (and alignments):
>> ALG11_N  ALG11 mannosyltransferase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  270.1   0.0   3.6e-84   1.6e-80       3     209 .]      92     300 ..      90     300 .. 0.96
   2 ?   -3.7   0.1       2.3     1e+04     145     164 ..     500     519 ..     492     527 .. 0.61

  Alignments for each domain:
  == domain 1  score: 270.1 bits;  conditional E-value: 3.6e-84
     ALG11_N   3 ivgffHPycnaggGGErVLwaavkalqkekkkvkivvYtgdlevskeeilekvkerfnieldkkrikfvaLkkrklveaktyprfTLlgqslgsvllal 101
                 ivgffHP+c+aggGGErVLwa +ka+q++++k+k+vvYtgd+ v+ke+il++v++rfni+l++ +i++++L++r++v a+++p+fTLlgqs+gs++la+
  KHJ34097.1  92 IVGFFHPFCDAGGGGERVLWAGIKAMQNRWPKAKFVVYTGDQGVEKETILNHVQSRFNITLHAPSIQLLYLTTRSWVLASSWPHFTLLGQSIGSIVLAW 190
                 89************************************************************************************************* PP

     ALG11_N 102 eallklvpdvfidtmGyaftyplvkll.agvkvvaYvHYPtistdmlkrvkere.akynnkeavakskllsllkllYyklfallYslvgsladvvmvns 198
                 +a++ lvpd+fidtmGyaf+++++k+l  +++++aY+H+Ptistdml+++k+ + ++++  +a +   +l + k +Y++lfa lYslvg ++d+vm+ns
  KHJ34097.1 191 NAFSLLVPDIFIDTMGYAFSLAFCKFLfPNLPTGAYIHFPTISTDMLSSLKSTSlSNIQGLNAGRGLGVLGFGKRIYWHLFANLYSLVGGSIDLVMTNS 289
                 ************************999789********************665415677778888899******************************* PP

     ALG11_N 199 sWTknhikslw 209
                 +WT++hi slw
  KHJ34097.1 290 TWTQQHIMSLW 300
                 *********** PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.3
     ALG11_N 145 dmlkrvkereakynnkeava 164
                 +m +rv++++++++++ +++
  KHJ34097.1 500 EMRQRVRKNTQRFTEEVFIT 519
                 46666666666666555444 PP

>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.3   0.0   1.8e-24   8.3e-21       8     170 ..     332     510 ..     326     512 .. 0.90

  Alignments for each domain:
  == domain 1  score: 74.3 bits;  conditional E-value: 1.8e-24
                      HTTTTTT-EEEEEESS-TTTTTHHHHHHHHHCCCCC...HCSCEEEEEES.......STTHHHHHHHHHHHCTTCGGGEEECCHSSSHHHHHHC CS
  Glycos_transf_1   8 klgknekkkiilsvgrlekeKgvdllikafallkkq...lnpnvklviaG......ngeeekelkklaeelelsdnviflgevsredleellkn 92 
                      ++ ++++k+ii+++g++++eK++ l++ +fa++k+      + +klv++G      + ++ + lk l  +l + d +if   v + d+ ++l +
       KHJ34097.1 332 DTSEKKRKPIIIYLGQFRPEKNHRLILNSFAKFKRSctsVSKVAKLVLVGsirnddDIARVNDLKVLTNQLDIVDSIIFELDVTWPDVLKWLAS 425
                      5667799***************************999999999*************9************************************* PP

                      ESEEEEEESSBSS-HHHHHHHHTT--EEEETTTTH.CHHCHTTT...SEEEE-TT-HHHHHHHHHHHHHSH.....HHHHHHHHHHH CS
  Glycos_transf_1  93 adifvlpsisEgfGivllEAmaaglpviasnaggp.aevvkdge...tGllvkpnnaealaeairkllede.....elrerlgenar 170
                      a+i v  + +E+fGi ++E+ aagl+ +++n+ggp +++vk+ e   tG+   +   e++a+ ++ +l+ +     e+r+r ++n++
       KHJ34097.1 426 ASIGVNGMWNEHFGIGIVEYQAAGLIPVVHNSGGPkLDIVKSSEgqpTGFYASTA--EEYAACFEMILDMSdvekvEMRQRVRKNTQ 510
                      *******999*********************6666279****99*9999988777..777777777777776679999999999987 PP

>> Glyco_trans_1_4  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   0.0     5e-15   2.2e-11       2     129 ..     340     488 ..     339     493 .. 0.77
   2 ?   -2.8   0.0       1.8   7.9e+03      45      71 ..     504     530 ..     497     533 .. 0.63

  Alignments for each domain:
  == domain 1  score: 44.3 bits;  conditional E-value: 5e-15
                      EEEEEES---GG.GTHHHHHHHHHHHH.H..H....EEEEEES---........HHHHHHHT..T-T.TEEEE---..THHHHHHHH-SEEEE- CS
  Glyco_trans_1_4   2 pvilfvGrleenvkgvdllleavpllrkk..d....vrlvivGdgprp......eeleelaa..gleerveftGfv..edlaellaaadvfvaP 79 
                      p+i+++G++ +++k+++l+l+ +++ +++       ++lv+vG+  ++      ++l+ l++  ++ ++++f   v  +d+ ++la+a++ v+ 
       KHJ34097.1 340 PIIIYLGQF-RPEKNHRLILNSFAKFKRSctSvskvAKLVLVGSIRNDddiarvNDLKVLTNqlDIVDSIIFELDVtwPDVLKWLASASIGVNG 432
                      89*******.566**********99995554256789******543222444455555444444455999999999999*************** PP

                      -..---SHHHHHHHHTT-EEEE-TGGGT.TT--....T.TSSEE--TT-HHHHHHHHH CS
  Glyco_trans_1_4  80 s..egfglkllEamaaglpvVatdvggi.aevv....g.engllvppgdpealaeail 129
                      +  e fg+ ++E+ aagl  V+ + gg+  ++v    g  +g+ ++   +e++a+  +
       KHJ34097.1 433 MwnEHFGIGIVEYQAAGLIPVVHNSGGPkLDIVksseGqPTGFYAS--TAEEYAACFE 488
                      **99*********************995455667655335778887..7788877655 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.8
                      HHHHHHTT-T.TEEEE---THHHHHHH CS
  Glyco_trans_1_4  45 eleelaagleerveftGfvedlaella 71 
                      ++++ +++++e+v +t +++++++l++
       KHJ34097.1 504 RVRKNTQRFTEEVFITEWIKQVEKLVD 530
                      444444466677888888877777665 PP

>> Glyco_transf_4  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   4.5e-05       0.2      48     155 ..     173     308 ..     103     323 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4.5e-05
  Glyco_transf_4  48 lpllkrllrslaflrrlrrllkrekpDvvHahspaalgaallalrrrlgiplVltvHglye........................krllkarlkp 118
                     +p++  l++s+ ++  +++++    pD+    + +a+ +a  + +   ++p+ +++H++                           + l++ ++ 
      KHJ34097.1 173 WPHFTLLGQSIGSIVLAWNAFSLLVPDIFIDTMGYAFSLAFCKFLF-PNLPTGAYIHFPTIstdmlsslkstslsniqglnagrgLGVLGFGKRI 266
                     4566677778888888888888889999976666777777777777.**********************************99999999999999 PP

  Glyco_transf_4 119 lsrllralerrllrradrviavSeatadelreryg.....vp 155
                     ++ l+ +l+  +  + d v ++S +t++++++++g     v+
      KHJ34097.1 267 YWHLFANLYSLVGGSIDLVMTNSTWTQQHIMSLWGswrswVK 308
                     999999999999********************9985555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       681  (0.0379832); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.39
# Mc/sec: 4161.38
//
Query:       KHJ34098.1  [L=409]
Description: hypothetical protein EV44_g3278 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.031   14.6   0.1       0.39   11.1   0.2    2.4  2  Styelin   Styelin
       0.13   12.5   0.1       0.28   11.4   0.1    1.5  1  ORF6N     ORF6N domain
        1.2    9.3   4.1        7.9    6.7   0.2    2.7  3  V-set     Immunoglobulin V-set domain


Domain annotation for each model (and alignments):
>> Styelin  Styelin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   6.6e-05      0.39      20      48 ..     168     196 ..     163     205 .. 0.78
   2 ?    0.2   0.0      0.16   9.9e+02      33      50 ..     358     375 ..     352     382 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6.6e-05
     Styelin  20 YikaalsiakhlLGDmtDeefqefmke.ve 48 
                 + k  + ++   L D tDe+ ++fmk+ +e
  KHJ34098.1 168 FFKRDWAAGI-SLLDDTDEDIKDFMKNrIE 196
                 5677899999.56677*********97455 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.16
     Styelin  33 GDmtDeefqefmkeveqa 50 
                 GD  D  f  f+++ e a
  KHJ34098.1 358 GDAIDYKFDIFLRNCENA 375
                 9999***********998 PP

>> ORF6N  ORF6N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   4.7e-05      0.28      24      51 ..     273     301 ..     271     342 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.7e-05
       ORF6N  24 etkrlnqavkrnkeRFped.fmfqLtkee 51 
                 ++k ln ++k+nk R+ +d + f + ++ 
  KHJ34098.1 273 DKKYLNTNFKNNKARYRSDdDRFSIRGNT 301
                 6899**************99***998754 PP

>> V-set  Immunoglobulin V-set domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.69   4.1e+03      26      43 ..      96     113 ..      90     146 .. 0.68
   2 ?    2.9   0.2      0.02   1.2e+02      39      72 ..     271     305 ..     257     311 .. 0.76
   3 ?    6.7   0.2    0.0013       7.9      57      89 ..     349     381 ..     320     386 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.69
                 TTTSEEEEEEEETTSSEE CS
       V-set  26 eeslsvyWyrqppgkepe 43 
                 ++s+ ++W + +++ + e
  KHJ34098.1  96 TASYPIKWHYTTSDVGRE 113
                 478899999999886433 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.02
                 TSSEEEEEEEECTTEEEEES.TTTEEEEEEGTTTE CS
       V-set  39 gkepeeliayysnkskeekk.kgrfslrkdpskgd 72 
                 +k +++l ++++n++   +  ++rfs+r++++ ++
  KHJ34098.1 271 EKDKKYLNTNFKNNKARYRSdDDRFSIRGNTQPQN 305
                 337888999999977777777********766655 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0013
                 ESTTTEEEEEEGTTTEEEEEESSESGGG-EEEE CS
       V-set  57 kkkgrfslrkdpskgdfsltiqnltlsDsGtYt 89 
                   ++++s+++d   ++f + ++n + +Ds +Y+
  KHJ34098.1 349 DNENKYSGNGDAIDYKFDIFLRNCENADSNSYY 381
                 34899************************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (409 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       538  (0.0300073); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.21s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 3236.37
//
Query:       KHJ34099.1  [L=150]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 1051.26
//
Query:       KHJ34100.1  [L=721]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.3e-07   30.0   7.6    4.3e-07   30.0   7.6    3.1  3  Cnn_1N          Centrosomin N-terminal motif 1
  ------ inclusion threshold ------
       0.13   12.2   1.0       0.44   10.6   0.2    2.2  2  DUF4762         Domain of unknown function (DUF4762)
        1.4    9.6  11.9        2.2    9.0   2.8    2.8  2  YabA            Initiation control protein YabA
        1.7    8.9   7.4          2    8.7   5.3    2.3  2  DUF5446         Family of unknown function (DUF5446)
        2.2    8.8   8.0        4.6    7.7   8.0    1.5  1  AAA_23          AAA domain
        6.9    6.8   7.7         22    5.2   0.4    2.8  2  APC_N_CC        Coiled-coil N-terminus of APC, dimerisation d


Domain annotation for each model (and alignments):
>> Cnn_1N  Centrosomin N-terminal motif 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   7.6   1.4e-10   4.3e-07       3      69 ..      83     151 ..      81     153 .. 0.96
   2 ?    2.7   1.3     0.048   1.4e+02      40      71 ..     146     177 ..     144     188 .. 0.60
   3 ?   -2.5   0.1         2     6e+03      50      68 ..     290     308 ..     287     313 .. 0.69

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 1.4e-10
      Cnn_1N   3 rEqeeqidkLkKENFdLKLriyfLeerleklse..eqkeellkenielkveveslqkelkekkkllrea 69 
                 +  eeqi++L+K N++LKL++++ ++r+ kl+   e  ++++ e  e ++ +e l  el+++++ ++ea
  KHJ34100.1  83 KQWEEQISTLHKQNYNLKLELFHRRDRQSKLEAelEAAQKIIGEQAEYQEINEVLLMELNRRDQAVDEA 151
                 7789*****************************9******************************99886 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.048
      Cnn_1N  40 ellkenielkveveslqkelkekkkllreaek 71 
                 ++++e i+l + +e+    lke +++lr++e 
  KHJ34100.1 146 QAVDEAINLITSLEEQIEFLKEENQRLRQSED 177
                 45555555555555555555555555555554 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 2
      Cnn_1N  50 veveslqkelkekkkllre 68 
                   v+sl++e k ++ ++ +
  KHJ34100.1 290 LSVQSLEQESKHLDSSILK 308
                 5678888888888777655 PP

>> DUF4762  Domain of unknown function (DUF4762)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.2   0.00015      0.44      19      49 ..     414     444 ..     400     452 .. 0.84
   2 ?   -1.4   0.0      0.82   2.4e+03       8      16 ..     618     626 ..     615     629 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00015
     DUF4762  19 tcttsYekvtiggvksCklVttCTdKhGkst 49 
                 t+++s  +   ++ ++C+ +t C d hG  t
  KHJ34100.1 414 TSSSSLTSLPARPQSACETITSCRDGHGWDT 444
                 66777888889*****************766 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.82
     DUF4762   8 eaaaviGGt 16 
                 +a++++GG 
  KHJ34100.1 618 VAEKIVGGR 626
                 79******7 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   2.5      0.02        61      10      57 ..      82     129 ..      78     139 .. 0.73
   2 ?    9.0   2.8   0.00072       2.2       6      66 ..     137     197 ..     132     210 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.02
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXX CS
        YabA  10 leeleeqleelleeleelkeelaelleenaeLeleneklrerleeeek 57 
                 +++ eeq+++l+++  +lk el +  ++ ++Le+e e  ++ + e+ +
  KHJ34100.1  82 VKQWEEQISTLHKQNYNLKLELFHRRDRQSKLEAELEAAQKIIGEQAE 129
                 677788888888888888888888888888888888877777744333 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00072
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXX CS
        YabA   6 lfdkleeleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekekkkel 66 
                 l+ +l++ ++ ++e  + +++l+e+++ l een++L+   ++++e  +e+ ++++ +++++
  KHJ34100.1 137 LLMELNRRDQAVDEAINLITSLEEQIEFLKEENQRLRQSEDEIKECRAESYRSSSPHQQKS 197
                 56678888899999999*************************9998855544444444333 PP

>> DUF5446  Family of unknown function (DUF5446)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   5.3   0.00066         2      13      70 ..     137     192 ..     131     194 .. 0.85
   2 ?   -3.2   0.0       3.2   9.6e+03      42      53 ..     240     251 ..     227     253 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00066
     DUF5446  13 lLeeiEeeltevEkelseav.neteaekeekeeerldllekElkdLvlCigklekaeeq 70 
                 lL+e  +  ++v +++++   +e ++e  ++e++rl + e+E+k+   C  +++ + ++
  KHJ34100.1 137 LLMELNRRDQAVDEAINLITsLEEQIEFLKEENQRLRQSEDEIKE---CRAESYRSSSP 192
                 79999999999999999876145666788999*************...***99998775 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 3.2
     DUF5446  42 keeerldllekE 53 
                   e+ l++l++E
  KHJ34100.1 240 PSEQTLSKLDEE 251
                 568999999998 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   8.0    0.0015       4.6      92     194 ..      84     181 ..      28     186 .. 0.52

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0015
      AAA_23  92 rerelskkkgkttkkaklelleideleqfisellgskkiil.nlilflgqerfeefelkdkkerleelekeleeledekkllekleqekekekeleele 189
                 +  e +++  k+ ++ klel+  ++++ +++ +l+  ++i+ ++  ++   +   +el+++ ++++e+++ +  le+++++l+++      +++l + e
  KHJ34100.1  84 QWEEQISTLHKQNYNLKLELFHRRDRQSKLEAELEAAQKIIgEQAEYQEINEVLLMELNRRDQAVDEAINLITSLEEQIEFLKEE------NQRLRQSE 176
                 2222333334444444444444455555555555533333324444444444444444555555555555555555555555555......33444444 PP

      AAA_23 190 eelee 194
                 +e++e
  KHJ34100.1 177 DEIKE 181
                 44443 PP

>> APC_N_CC  Coiled-coil N-terminus of APC, dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   1.8     0.022        66       8      37 ..      87     116 ..      83     123 .. 0.90
   2 ?    5.2   0.4    0.0074        22       8      22 ..     160     174 ..     157     179 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.022
    APC_N_CC   8 rQvEaLkkenthlrrELedNSshLskLEte 37 
                  Q+  L k+n +l+ EL     + skLE e
  KHJ34100.1  87 EQISTLHKQNYNLKLELFHRRDRQSKLEAE 116
                 69999***********************98 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0074
    APC_N_CC   8 rQvEaLkkenthlrr 22 
                  Q+E Lk en  lr+
  KHJ34100.1 160 EQIEFLKEENQRLRQ 174
                 7*************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (721 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1084  (0.0604607); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.69u 0.25s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 4956.42
//
Query:       KHJ34101.1  [L=306]
Description: putative cation efflux family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.1e-39  133.3   4.2    1.1e-38  133.0   4.2    1.1  1  Cation_efflux  Cation efflux family
    0.00016   21.7   0.4    0.00052   20.1   0.0    2.0  2  ZT_dimer       Dimerisation domain of Zinc Transporter
  ------ inclusion threshold ------
      0.065   12.3   0.2       0.14   11.1   0.1    1.5  1  DUF808         Protein of unknown function (DUF808)


Domain annotation for each model (and alignments):
>> Cation_efflux  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.0   4.2   1.8e-42   1.1e-38      27     198 ..       1     188 [.       1     189 [. 0.98

  Alignments for each domain:
  == domain 1  score: 133.0 bits;  conditional E-value: 1.8e-42
  Cation_efflux  27 lladafhslsdlvsllllllalklsrkppderfpfGygrlevlgalvsgllllglavfllleaiqkli..................kegereihag 104
                    ++ada hsl+d++s++l+l ++  s++pp+  fp G+g++e+lgal ++++ll++++f+ +++++ l+                  ++g  +i+++
     KHJ34101.1   1 MIADAWHSLTDMASDVLTLATVSCSKMPPTGYFPTGFGKIESLGALGVSSMLLIGGCFMCYHSCEILYaqfflhsaienvthfhshSHGSSTIPSI 96 
                    79***********************************************************************************999******** PP

  Cation_efflux 105 lalvvalvslvvnlalllilrragrklrsaalkaaalhvlgDaltslgvlvsalvillfnlksgplaDpvaslligliilysalkllkeslseL 198
                    +a+++al+ ++++ +l+++++r++++ +s++l+++a h+++D+lt  ++ +++l++ +  +++  ++Dpv++++i+l++++ + ++++++l+eL
     KHJ34101.1  97 HAAWLALGTIFLKEWLYHATMRVAKRQKSSVLASNATHHRVDSLTGFVTFFAILGANFLREAT--WLDPVGGFIISLLVIKGGCGNTMSALYEL 188
                    **********************************************************96665..**************************998 PP

>> ZT_dimer  Dimerisation domain of Zinc Transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1      0.69   4.1e+03      18      39 ..      76      97 ..      70      98 .. 0.70
   2 !   20.1   0.0   8.7e-08   0.00052       9      74 ..     201     272 ..     192     275 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.69
                S-EEEEEEEEE-S----EEEEE CS
    ZT_dimer 18 gvkgvhdlrtrksGskifvdlh 39
                 +++v +++++ +Gs  + ++h
  KHJ34101.1 76 AIENVTHFHSHSHGSSTIPSIH 97
                4677888888888877665555 PP

  == domain 2  score: 20.1 bits;  conditional E-value: 8.7e-08
                 HHHHHTT......-SS-EEEEEEEEE-S----EEEEEEEE-TTS-HHHHHHHHHHHHHHHHHH-TT--EEEE CS
    ZT_dimer   9 ireiiks......vpgvkgvhdlrtrksGskifvdlhievdgdlsvkeaHeiadevekrikeefpgvadvli 74 
                 i++ +ks      +   ++ +d+   ksG+++++ l++ v++++sv+    i +e++++i +++ gv++v i
  KHJ34101.1 201 IKQNVKStleeirYGSYVELQDIEGLKSGQNYLIRLQLAVPPTWSVQTMAVIEKELRESIGSKIRGVRRVQI 272
                 4444433333344556889999999***************************************99998865 PP

>> DUF808  Protein of unknown function (DUF808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   2.4e-05      0.14      92     122 ..      48      79 ..      40      98 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 2.4e-05
      DUF808  92 itplLmlGgayLcfEGaeKvlekll.hkeeee 122
                 +  +L++Gg+++c+   e ++ +++ h++ e+
  KHJ34101.1  48 VSSMLLIGGCFMCYHSCEILYAQFFlHSAIEN 79 
                 7789****************999953666553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       751  (0.0418874); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2189.28
//
Query:       KHJ34102.1  [L=373]
Description: putative orotidine-5 -phosphate decarboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-88  296.1   0.0    1.9e-88  295.9   0.0    1.0  1  OMPdecase  Orotidine 5'-phosphate decarboxylase / HUMPS famil


Domain annotation for each model (and alignments):
>> OMPdecase  Orotidine 5'-phosphate decarboxylase / HUMPS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  295.9   0.0     1e-92   1.9e-88       1     225 []      38     358 ..      38     358 .. 0.99

  Alignments for each domain:
  == domain 1  score: 295.9 bits;  conditional E-value: 1e-92
                 SEEEEEE-SSSHHHHHHHHHHHGGGSSEEEEEHHHHHHHTHH....HHTHHHHHHHHHTSEEEEEEEE-S-HHHHHHHHHSTCHHHHTTESEEEEEGTG CS
   OMPdecase   1 snLclalDvatarelleladkvgpsivvlKthydlvegwgfe...gtgaklaalarkhgflifeDrKfaDIGntvekqatagsarikewadivtvhava 96 
                 snLc ++Dv++a+ ll+la+ +gpsivvlKthydl+++w+++   gtga+la  ar+hgflifeDrKfaDIGntv++q+ +g+ari++w++iv++++ +
  KHJ34102.1  38 SNLCFSADVSNAKHLLSLANAIGPSIVVLKTHYDLISNWDYNpttGTGARLAHIARRHGFLIFEDRKFADIGNTVRLQYVEGTARIIDWSHIVNINMIP 136
                 79************************************************************************************************* PP

                 HHHHHHHHHHHHHHTT................................................................................... CS
   OMPdecase  97 Gkasvkalaeaaekwg................................................................................... 112
                 Gkas++al  aa kw+                                                                                   
  KHJ34102.1 137 GKASIEALSSAAGKWKynnhykvktdisvgtspnldysgdredtkadnyfftpdtdcpqpsptiqarkssivsittvsqhfesvnsprnndefalekfe 235
                 *************************************************************************************************** PP

                 .......S.EEEEEESTSSGGHHHHHHHSHHHHHHHHHHHHHHHTTESEEECCCHTHHHHHHTTCSCEEEHHHTT.........EEEEECTTCCGGGHH CS
   OMPdecase 113 .......nrgllilaqmsskgnlmlqekgytqacveaarehkaedfvmGfvaqetlnateedaddfihltpgigl.........eqggdgkgqqyntpe 195
                        +rgllilaqmss+gnl+++e  yt+acv+ are k  d vmGfv+qe ln +e++ d+f+++tpg+ l         +  +dg+gqqyntp 
  KHJ34102.1 236 gieeaptDRGLLILAQMSSEGNLATRE--YTDACVKIAREFK--DYVMGFVSQESLN-SEPE-DHFLTFTPGCHLppsgwdenlKLASDGQGQQYNTPS 328
                 ***************************..*************..9************.8888.9*********************************** PP

                 HHHHHTTCSEEEESHHHHTSSSHHHHHHHH CS
   OMPdecase 196 kligiagadiiivGRgIlkagdpveeaery 225
                 kli++ g+diiivGRgI++a+dp++eaery
  KHJ34102.1 329 KLIEKMGSDIIIVGRGITEAADPASEAERY 358
                 *****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (373 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       300  (0.0167327); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.28s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2627.82
//
Query:       KHJ34103.1  [L=523]
Description: putative serine threonine-protein kinase psk1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-65  221.7   0.0    1.5e-65  221.2   0.0    1.3  1  Pkinase        Protein kinase domain
    3.6e-32  111.7   0.0    5.3e-32  111.1   0.0    1.2  1  Pkinase_Tyr    Protein tyrosine kinase
     0.0014   17.6   0.3      0.003   16.5   0.1    1.6  2  Haspin_kinase  Haspin like kinase domain
     0.0057   17.3   0.2      0.016   15.9   0.2    1.8  1  Pkinase_C      Protein kinase C terminal domain
  ------ inclusion threshold ------
      0.045   13.4   0.1        3.4    7.2   0.1    2.6  2  FTA2           Kinetochore Sim4 complex subunit FTA2
      0.092   12.0   0.1       0.31   10.3   0.0    1.9  2  Kinase-like    Kinase-like


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  221.2   0.0   5.1e-69   1.5e-65       2     263 ..     164     423 ..     163     424 .. 0.93

  Alignments for each domain:
  == domain 1  score: 221.2 bits;  conditional E-value: 5.1e-69
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH..HHHHHHHHHHHHHS.CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--H CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke..kkvlrEikilkklk.hpnivrlyevfeekdelylvleyveggeladllerkgslse 97 
                 + ++ lG+G+fG V  +++++tg+ +A K++kk + +  ++  +++ +E +il+++k hp++v+l+++f+++++lyl+ley++ggel++ l + ++++e
  KHJ34103.1 164 QSIRCLGKGTFGIVHLVKQHTTGRLYAQKQFKKASLTLHERliQQTKTERTILESVKrHPFVVKLFYAFQDDEKLYLILEYAQGGELFTQLAKARMFPE 262
                 67889******************************99998899******************************************************** PP

                 HHHHHHHHHHHHHHHHHH.HTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS CS
     Pkinase  98 eeakkiakqilegleylH.skgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgk 194
                   a +++++++ +l+ylH + g+i+rDlKpeN L+d++g+l +tDFGl+k +  +++ ++s+ gt eY+APE++ +++y+k+vD+Ws G + + lltg+
  KHJ34103.1 263 PVAVFYLAEMVLALDYLHhHLGVIYRDLKPENCLLDSEGHLLLTDFGLSKVIIGENDrFNSVLGTVEYMAPEIILGHRYGKTVDWWSFGALGFDLLTGS 361
                 *****************95668*****************************9999888***************************************** PP

                 -STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT......HHHHHTSGG CS
     Pkinase 195 ppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt......aeellqhpy 263
                 ppf+g+++ + +e++++q             kl+ ++ +s++akdl+++ll+k+p+kRl+      ++ +++h++
  KHJ34103.1 362 PPFKGQNQMKVQERIVKQ-------------KLQLPHYLSPDAKDLITRLLRKEPSKRLGanmpkdISTIKKHRF 423
                 ****88888766666666.............7889999**********************565555556666665 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.1   0.0   1.8e-35   5.3e-32       4     250 ..     166     407 ..     163     411 .. 0.90

  Alignments for each domain:
  == domain 1  score: 111.1 bits;  conditional E-value: 1.8e-35
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekl 100
                   + lG+G+fG V+  + + ++ +   +   K+ + + +e+  ++  +e +i++++ +hp +vkl  +  ++e+l++++ey++gG+L + L k   + +
   KHJ34103.1 166 IRCLGKGTFGIVHLVKQH-TTGRLYAQKQFKKASLTLHERLIQQTKTERTILESVkRHPFVVKLFYAFQDDEKLYLILEYAQGGELFTQLAKA--RMF 260
                  678***********9999.5555555666677777778888999999********************************************98..889 PP

                  BHHHHHHHHHHHHHHHHHHHHT.TEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLesk.klvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllwE 197
                       + + +++  +++yL+++  ++ rdl   N+Ll+++ +  ++DfGL++ i    e  + ++    v++mapE++  +++ +  D WsfG l + 
   KHJ34103.1 261 PEPVAVFYLAEMVLALDYLHHHlGVIYRDLKPENCLLDSEGHLLLTDFGLSKVI--IGENDRFNSVLGTVEYMAPEIILGHRYGKTVDWWSFGALGFD 356
                  9999999999*********98736******************************..4444556677889***************************** PP

                  HHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS- CS
  Pkinase_Tyr 198 iftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRp 250
                  ++t g+ p++g ++++v e++ + ++l+ p++ +++ ++l+++ ++++p++R 
   KHJ34103.1 357 LLT-GSPPFKGQNQMKVQERIVK-QKLQLPHYLSPDAKDLITRLLRKEPSKRL 407
                  ***.*************999965.579999*********************95 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1     1e-06     0.003     170     256 ..     224     313 ..     153     324 .. 0.81
   2 ?   -3.7   0.0       1.5   4.4e+03      44      76 ..     459     489 ..     451     497 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1e-06
  Haspin_kinase 170 kvlkekpdfyseqqlflvlllkdkGtdLeev.klkswkqalsifw..qivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsRl 256
                    +v+k    f+++++l+l+l+  ++G+  +++ k + + +   +f+  ++v  L     ++    RdL+ +n L+d++++  l d+ ls++
     KHJ34103.1 224 FVVKLFYAFQDDEKLYLILEYAQGGELFTQLaKARMFPEPVAVFYlaEMVLALDYLHHHLGVIYRDLKPENCLLDSEGHLLLTDFGLSKV 313
                    33444478899******************9989999*********444556666788999999***********************9987 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.5
  Haspin_kinase  44 islPvkdqvsrdkikkklrnsesllslnsqeev 76 
                     slP++  +srd   +k +   s +s+++++++
     KHJ34103.1 459 TSLPISPMISRDTQWNKEKT--SSISISQEKPI 489
                    58899999999987776554..44566666655 PP

>> Pkinase_C  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.2   5.3e-06     0.016       1      46 []     445     498 ..     445     498 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 5.3e-06
   Pkinase_C   1 vesdeDtsNFDpeFTeedprdtppddm...........pagspltssvq..enFrGFtY 46 
                 ++++e   NF +eFT+ ++       m           +++ +++++++  ++F GF+Y
  KHJ34103.1 445 ITDPELAENFATEFTSLPISP-----MisrdtqwnkekTSSISISQEKPieNPFGGFSY 498
                 67889999*********8433.....23334477866655556666665*********9 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.1    0.0011       3.4      22      81 ..     161     222 ..     144     235 .. 0.80
   2 ?    3.2   0.0     0.019        57     171     204 ..     262     296 ..     254     311 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0011
        FTA2  22 kdiefleyLgkglhs..iVlkvkirgkeYALKlFrfleaeeleeaeedlkiprealkelasy 81 
                  d++ +  Lgkg+ +  +++k    g+ YA K F++ + +  e+  +++k++r+ l++++ +
  KHJ34103.1 161 SDFQSIRCLGKGTFGivHLVKQHTTGRLYAQKQFKKASLTLHERLIQQTKTERTILESVKRH 222
                 7899999********444455567788**********9988888888888888877777655 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.019
        FTA2 171 eelevsqlpkllrdlkklh.klgIvvrDlkeenyi 204
                 e++ v +l +++  l+ lh  lg++ rDlk+en++
  KHJ34103.1 262 EPVAVFYLAEMVLALDYLHhHLGVIYRDLKPENCL 296
                 6677778888888999886269***********97 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.35     1e+03      31      71 ..     190     231 ..     165     242 .. 0.57
   2 ?   10.3   0.0    0.0001      0.31     157     204 ..     276     325 ..     250     406 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.35
  Kinase-like  31 vkdqetgeplavkvfllps.easkkdlerlkeqelairllrg 71 
                  ++ q ++ +l+++  l+++ +  +  le +k+  + ++l+ +
   KHJ34103.1 190 AQKQFKKASLTLHERLIQQtKTERTILESVKRHPFVVKLFYA 231
                  344444556666666666655555566666666666666555 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.0001
  Kinase-like 157 aanLq.akglvhgkftvdnllldekgglmlggft.aLvragtkvvlseve 204
                    +L+ ++g++  +++++n lld +g l l++f+ + v  g++ + ++v 
   KHJ34103.1 276 LDYLHhHLGVIYRDLKPENCLLDSEGHLLLTDFGlSKVIIGENDRFNSVL 325
                  45665268*************************72334456666655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       683  (0.0380947); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 3624.85
//
Query:       KHJ34104.1  [L=732]
Description: hypothetical protein EV44_g5532 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     1e-108  363.9   0.0    7.5e-95  318.3   0.0    2.1  2  TRM       N2,N2-dimethylguanosine tRNA methyltransferase
     0.0033   18.0   1.5        1.7    9.3   0.0    2.5  2  ING       Inhibitor of growth proteins N-terminal histone-bin
  ------ inclusion threshold ------
       0.04   13.6   0.0      0.084   12.6   0.0    1.5  1  Met_10    Met-10+ like-protein
       0.12   12.8   0.5       0.35   11.3   0.5    1.8  1  NINJA_B   Putative nuclear localisation signal


Domain annotation for each model (and alignments):
>> TRM  N2,N2-dimethylguanosine tRNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  318.3   0.0   1.7e-98   7.5e-95       6     317 ..      71     539 ..      67     554 .. 0.90
   2 !   43.4   0.0   5.5e-15   2.4e-11     318     376 .]     582     640 ..     573     640 .. 0.96

  Alignments for each domain:
  == domain 1  score: 318.3 bits;  conditional E-value: 1.7e-98
                 EE----.SS--TT--SS--GGGHHHHHHHHHH....HHHHHHHH-S-.................................................... CS
         TRM   6 kvedke.vtvskkeeVFYNPvqefnRDlsvlvir.qlellkkklgek.................................................... 50 
                 kv++++ +  sk ++VFYNP+q+fnRDlsvl+i+ + e   +  + k                                                    
  KHJ34104.1  71 KVPQQSpLENSKPQDVFYNPIQQFNRDLSVLAIKaYGEQVVEVQK-Kkekhsnltkirakekrcnkrknhhdellenlstkksclpditsprtdnvkee 168
                 55555445678999*******************854333222222.224688*********************************************** PP

                 ...................................................................EEEEESS-TTSHHHHHHHHH-S-EEEEEEE-S CS
         TRM  51 ...................................................................ikvldaLsasGlRaiRfalEvpgvkevlaNDi 82 
                                                                                    +++ldaLsa+GlRa+R+a+E+p v ++ aND+
  KHJ34104.1 169 pnialptiekngspiqplteardderialvvpesstsqddgncclerekikdlksdesnkapsyvphFTILDALSATGLRALRYAHEIPFVTSITANDL 267
                 *************************************************************************************************** PP

                 -HHHHHHHHHHHHHTT--GGEEEE-S-HHHHHC............--SS-EEEEEE--SS--GGGHHHHHHHEEEEEEEEEEE--HHHHTT.SSHHHHH CS
         TRM  83 sekAvelikeNvklneveeivvineddAnvlla............ekkkrfdviDlDPfGspapfldsavqsvkekglLlvTaTDtavLaG.aspekcl 168
                 ++ A + ik N+  n ++  + + +++A   ++            +k ++++viDlDP+G+++pfld+avq+v+++glL+vT+TD av a    pekc+
  KHJ34104.1 268 LPSATKQIKLNILHNRISSKIIVTNGNAISHMYnlidsnktsnlcTKPSKYNVIDLDPYGTASPFLDAAVQAVQDGGLLCVTCTDAAVWASnGWPEKCF 366
                 ******************7666666699999999999988877777889*****************************************9789***** PP

                 HHHSSB---STTHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETTEEEEEEEEEE-HHHHHHHHTTEEEEEEE.TTT..............--EEEE- CS
         TRM 169 rkYgavalkselcHEvalRillkavareaakYekavepllslsadfYvrvfvkvktgaakvkkvleklglvlhC.sgC..............lseekvk 252
                 + Yg+ +lk  l HE +lR++l+a+a++aa+Y  a++pllsls+dfY r+fv+v ++a++vk ++ k+++v++C +gC              +   ++k
  KHJ34104.1 367 ALYGGLPLKGPLSHEAGLRLILHAIATSAARYGLAITPLLSLSIDFYARIFVRVYKSAQHVKFLAGKTMIVYNCdTGCgawttqmlgrnrfaT---SKK 462
                 **************************************************************************4468999887766555431...222 PP

                 -GGG--..............SB-TTT-SBEEEEEEEE-S-S--HHHHHHHHHHHCT..-TTS..-HHHHHHHHHHHHHHS- CS
         TRM 253 glakfk..............aecehcgaklhlaGPlwlgplkdkefveevleeaekekeeel..kkrvkklLklikeElld 317
                 g    +              ++c +cg k+h++GP+++gpl+d +fv+++l+ +++ ++e++    r++++L+++ eE l 
  KHJ34104.1 463 G----NemwkhgleqgpstnQNCAECGFKTHIGGPMYAGPLHDPDFVQRILDSIKDVDKETYqtIPRIQGMLTVALEECLS 539
                 2....133335677888888************************************9998886678************654 PP

  == domain 2  score: 43.4 bits;  conditional E-value: 5.5e-15
                 -SS-EEHHHHHHHHT-SS---HHHHHHH....TT-EE-TTSTTEEE-SS-HHHHHHHHH CS
         TRM 318 aplyydlsqlasvlklsvpplkkvvsalkelgfevsrtHakpkaikTnapleavvevlr 376
                 ap+ + l  l++vl++ +p  + ++ al++lg++++r+H+k+ +ikT+ap+++++ ++r
  KHJ34104.1 582 APFLFMLPMLSKVLHTITPHENAIRGALRHLGYRATRSHTKGGCIKTDAPWKEIWRIMR 640
                 6999*****************************************************97 PP

>> ING  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.3    0.0018       7.9      15      64 ..     118     167 ..     104     189 .. 0.70
   2 !    9.3   0.0   0.00038       1.7      13      56 ..     502     552 ..     502     567 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0018
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...........TS..S-HHHHHHHHHHHHH CS
         ING  15 elqrnltelreiDakvqellkeidskiekfl...........kngslqknekeeelsriqe 64 
                 e + nlt++r++++++++ ++  d+ +e+++                       ++ +++e
  KHJ34104.1 118 EKHSNLTKIRAKEKRCNKRKNHHDELLENLStkksclpditsP-----------RTDNVKE 167
                 55679**************************655555555432...........3333332 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00038
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......TS..S-HHHHH CS
         ING  13 PlelqrnltelreiDakvqellkeidskiekfl.......kngslqkneke 56 
                 P+ +qr l+ ++++D+++++++++i+  +   l        ++++q+n+ +
  KHJ34104.1 502 PDFVQRILDSIKDVDKETYQTIPRIQGMLTVALeeclspsHMNENQSNPTD 552
                 7889*********************88888777777777733344444433 PP

>> Met_10  Met-10+ like-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.9e-05     0.084     126     198 ..     261     347 ..     239     348 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.9e-05
                 EEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-EE..............EEE.E--TTTGGGGHHHHHHHEEEEEEEE CS
      Met_10 126 rvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqlad..............rvv.mnlpksaieFldkvlaalkdggvih 198
                  + a+dl P++ k +k ni  N++++++ + ++ +   +  +l+d               v+ ++   +a  Fld++++a++dgg+ +
  KHJ34104.1 261 SITANDLLPSATKQIKLNILHNRISSKIIVTNGNAISHM-YNLIDsnktsnlctkpskyNVIdLDPYGTASPFLDAAVQAVQDGGLLC 347
                 689*************************66666555444.555667888999***99975552455678999***********99987 PP

>> NINJA_B  Putative nuclear localisation signal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.5   7.7e-05      0.35      14      67 ..     112     175 ..     107     228 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 7.7e-05
     NINJA_B  14 EwrkRkEmqs.LrRmeAKRrRsEkqrnknsgegevskeeeakd...........rrrgraslvlPr 67 
                 E +k+kE  s L ++ AK +R++k++n+  +e  +++ + +k+             +++++++lP+
  KHJ34104.1 112 EVQKKKEKHSnLTKIRAKEKRCNKRKNH-HDE-LLENLSTKKSclpditsprtdNVKEEPNIALPT 175
                 77899998765***************97.333.333333223346667777666444555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (732 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       889  (0.0495845); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.67u 0.25s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 5129.45
//
Query:       KHJ34105.1  [L=463]
Description: putative 2-methylcitrate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.2e-95  317.9   0.0    9.8e-95  317.7   0.0    1.0  1  Citrate_synt  Citrate synthase, C-terminal domain


Domain annotation for each model (and alignments):
>> Citrate_synt  Citrate synthase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  317.7   0.0   5.4e-99   9.8e-95       1     361 []      65     449 ..      65     449 .. 0.90

  Alignments for each domain:
  == domain 1  score: 317.7 bits;  conditional E-value: 5.4e-99
                   GGTTEEEEEESSEEEETTTTE..EEETTEEHHHHH.........HHHS-HHHHHHHHHHSS---HHHHHHHHHHHHCTTS--HHHHHHHHCSSTTS- CS
  Citrate_synt   1 glrgvaaleteisevdgekge..lrYRGydieeLa.........eekssfeevaylLltgelPtkeelkefkeelaearklpekvlealealpkdah 86 
                   g+rg++++++e s +d+   +  +r++G++i++ +         +++   e ++ lLltg++P+ +++++f+++la +++lp  v e l+++pk+ h
    KHJ34105.1  65 GMRGLTSMLWEGSVLDP---NegIRFHGRTIKD-CqrelpkgksGKEMLPEAMFLLLLTGDVPSISQTRQFSRDLATNAHLPPFVEELLDRFPKNVH 157
                   89*************94...335**********.77******9543444555555699*************************************** PP

                   HHHHHHHHHHHHHHHSTTCTCHHH......HHHHHHHHHHHHHHHHHHHHHHHHHHHTTS..--.-.--TTSSHHHHHHHHHHS.S---HHHHHHHH CS
  Citrate_synt  87 pmavlraavsalsaddeeseakee......seeaalrdalkliAklptiaaaiyrarlgr.epl.e.pddklsyaenflymlrg.kkpdeeeaklld 173
                   pm+++++avsals+ +e ++a e+       +  al+d+++liAklp+iaa iy++++ +  pl +  d++++++ nf+ ml +  k +e++ ++l+
    KHJ34105.1 158 PMNQFSIAVSALSTTSEFANAYETgcdrsqLWLPALNDCISLIAKLPVIAAKIYQNTYRGvGPLpAiIDPEQDWSYNFAAMLGKgGKRNEDFQDFLR 254
                   ***********99998884444444555569***************************74345543455779**********6347889******** PP

                   HHHHHHS--SS.SHHHHHHHHHHTTT--HHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHSSGG........GHHHHHHHHHHTTTS--TTBC-SSSS CS
  Citrate_synt 174 lalvlhaDHel.naSTfaarvvaStladlysaiaagigalkGplhgganeavlkmleeigsaev.......eveeylekvlakekerlpGfGHrvyk 262
                   l+l lh DHe+ n+S++++++v+S+l+d++ +++ag+ +l+Gplhg a ++vl++++ + ++++       ++ ++ +++l+++ +++pG+GH+v++
    KHJ34105.1 255 LYLALHGDHEGgNVSSHTTHLVGSALSDPFLSYSAGLQGLAGPLHGLAAQEVLRWIQMM-EENMgpnytvdDMLKFFQQTLESG-KVIPGYGHAVLR 349
                   ***********************************************************.665779999999999*******96.************ PP

                   S--HHHHHHHHHHHHHHTCHTHHHHHHHHHHHHHHHHHHHHCHH.GCT-EB-THHHHHHHHHHTT--GGG.HHHHHHHHHHHHHHHHHHHHH.HT-- CS
  Citrate_synt 263 ksDpRakilkelaeelaeekgkdpllklaeeleevapevlkeke.eknlypNvDfysgvlyralgipeel.ftvlfaisRvaGwlAhileql.adnk 356
                   + DpR+++l e+a++      +dp +kl+++++e ap++lk +   + +ypNvD+ sgv+++++g+ e l +tv+f++sR++G l+++++ +     
    KHJ34105.1 350 RADPRFEALMEYATSRPI--ANDPTFKLVKKVSEHAPQFLKMNCrIQCPYPNVDASSGVIFHYYGFRETLyYTVIFGVSRALGALSQYIWDRaLGLP 444
                   *************99877..8*******************98779889********************988*******************8745566 PP

                   ----E CS
  Citrate_synt 357 iiRPr 361
                   i+RP+
    KHJ34105.1 445 IERPK 449
                   9**96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       355  (0.0198003); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 3509.04
//
Query:       KHJ34106.1  [L=1672]
Description: putative wd g-beta repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1672 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       896  (0.0499749); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.93u 0.28s 00:00:01.21 Elapsed: 00:00:00.47
# Mc/sec: 10803.99
//
Query:       KHJ34107.1  [L=1554]
Description: hypothetical protein EV44_g3139 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.052   13.1   0.9       0.23   11.1   0.9    2.2  1  PikAIV_N    Narbonolide/10-deoxymethynolide synthase PikA4 N-
       0.09   12.6  13.7        5.8    6.8   3.4    5.2  4  PKcGMP_CC   Coiled-coil N-terminus of cGMP-dependent protein 
        1.7    9.0   9.1         21    5.5   9.1    3.0  1  Cadherin_C  Cadherin cytoplasmic region


Domain annotation for each model (and alignments):
>> PikAIV_N  Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.9   3.8e-05      0.23      15      29 ..     920     934 ..     918     935 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.8e-05
    PikAIV_N  15 kEnERLRqqNrrLtA 29 
                 kE+E LR++N +L+A
  KHJ34107.1 920 KEAEALRKENSQLAA 934
                 9*************9 PP

>> PKcGMP_CC  Coiled-coil N-terminus of cGMP-dependent protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1     0.025   1.5e+02      21      31 ..     895     905 ..     892     908 .. 0.89
   2 ?    5.0   0.0    0.0037        22       5      21 ..     970     986 ..     968     991 .. 0.83
   3 ?    6.8   3.4   0.00098       5.8       5      31 ..    1026    1053 ..    1023    1054 .. 0.87
   4 ?    1.0   0.1     0.064   3.8e+02      12      29 ..    1116    1133 ..    1114    1134 .. 0.92

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.025
   PKcGMP_CC  21 deEIqELrskL 31 
                 + E +EL+skL
  KHJ34107.1 895 ESELNELKSKL 905
                 6799******9 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0037
   PKcGMP_CC   5 lKDERIRELEkrlaekd 21 
                 +KD RI EL++ l++ +
  KHJ34107.1 970 SKDYRITELQNLLSNTE 986
                 7**********998765 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.00098
   PKcGMP_CC    5 lK.DERIRELEkrlaekdeEIqELrskL 31  
                  lK D +++ LE+r++ + eE + Lr  L
  KHJ34107.1 1026 LKlDTKVKNLEQRIKHQSEELENLRNEL 1053
                  55599********************887 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.064
   PKcGMP_CC   12 ELEkrlaekdeEIqELrs 29  
                  +LE rl+   +E+ ELrs
  KHJ34107.1 1116 DLEGRLQSVLKEVSELRS 1133
                  7999999999*******8 PP

>> Cadherin_C  Cadherin cytoplasmic region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   9.1    0.0035        21       5      81 ..     942    1019 ..     939    1166 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0035
  Cadherin_C    5 kkellaeeeddvreniinYddeGGGEeDteaydisaLrspeesleeeakarrdvap.eaekaaeeksdvrefieeklk 81  
                  +ke+++++ +d++ +i++ ++    E D + y i++L++  +++e + k+ +d ++  + k+ e+k++++++i++  +
  KHJ34107.1  942 EKEKISKDYEDFKQEILKLKEKSRDECDSKDYRITELQNLLSNTELKIKNFEDEKSnYVVKELENKKNFQDLIKKAES 1019
                  67788899********************************88744444443443332222344677777777765432 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2412  (0.134531); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.46u 0.30s 00:00:01.76 Elapsed: 00:00:00.58
# Mc/sec: 8088.62
//
Query:       KHJ34108.1  [L=554]
Description: putative sugar transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-30  106.0  55.1    7.9e-27   94.1  35.6    1.9  2  MFS_1       Major Facilitator Superfamily
      7e-20   71.3  24.9    2.7e-19   69.4  24.9    1.9  1  Sugar_tr    Sugar (and other) transporter
    0.00047   19.1   6.4    0.00047   19.1   6.4    1.8  2  MFS_1_like  MFS_1 like family


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.1  35.6   1.3e-30   7.9e-27       5     353 .]     102     512 ..      99     512 .. 0.81
   2 !   26.1  11.5     6e-10   3.6e-06      42     173 ..     414     545 ..     411     552 .. 0.77

  Alignments for each domain:
  == domain 1  score: 94.1 bits;  conditional E-value: 1.3e-30
       MFS_1   5 aflsalarsi.......lgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllfasslw.lllvlrvl 94 
                 ++l ++++++       ++++lp  l++++g+s+  +   +   ++g +++s+++G+ sd +Gr+  + l+ll+ +++ +++++  ++ w +++v  + 
  KHJ34108.1 102 FVLCGFGWFTdllwiqqVALTLP-SLSTEFGVSENRVRYTTCYMFVGLCFGSIFWGVGSDIVGRKIAFNLTLLIAGIFgIAVGA--APTWtTVCVIYFG 197
                 55666666666677766677777.9*************97777888********************************444444..66677******** PP

       MFS_1  95 qGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllgglla.sslg....Wravfyilaivsllafv.lfllllpeepperkrkspkee 187
                  ++g g+ +p+ +al+ +  p    gr + lls+ + +G ++  + +  ++  ++     Wr++ y+++ v+l++f+  f+l+ + e p+    ++++ 
  KHJ34108.1 198 IAFGVGGNLPVDGALFLEFLPN-ASGRLLTLLSIWWPMGQLVSSVSSWGFIgGNFTsdkgWRYSCYLMGSVTLIMFLaQFFLFHLLESPKLLLARGRQA 295
                 *********************9.******************9976554444266557888*****************6444555666666666666666 PP

       MFS_1 188 e........................................kgtgpaplvpawkallkdpvl....w.....illialllfffgfsglltllplylqev 237
                 e                                        k   +++l+  ++  + +p +    +     +l++++l +++g+ ++  +lp yl + 
  KHJ34108.1 296 EavavvhgmahknrtttwlteeilnelggypepnqpqlltrKEMIRSKLSA-FSFKRIRPLFatkgMarnttMLWYCWLAIGMGYPLFNGFLPQYLSKG 393
                 689999999999999999999999998888888887766664444444444.777777776654441566779************************** PP

       MFS_1 238 lgls....glllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllllvlvliGfglgfvfpsllalasdlappe 332
                  + +    + ++++  + +++++g+++++la + +d     rr +++++ ++++ ++++++  +  a++ l ++++ ++++ ++++ l +++ +++p++
  KHJ34108.1 394 QKATgevvSEYTTYRNYVIISIMGIPGSILAYYTVDLPYIGRRGTMIVSTFICGIMLFLFTISF-QASFQLGISAVESLFQNVMYAVLYSYTPEVFPTS 491
                 ******9966777778899999999999999999998444446666666666666655555555.789***9*************************** PP

       MFS_1 333 eagtasglfntagslggalgp 353
                  +gt +g++++++ +gg+ +p
  KHJ34108.1 492 IRGTGTGIASLLNRVGGLCAP 512
                 *****************9876 PP

  == domain 2  score: 26.1 bits;  conditional E-value: 6e-10
       MFS_1  42 algaavaslplGrlsdr..fGrrrvlllglllfalglllll..fasslwlllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGail 136
                 ++  + +s+++ + +d   +Grr +++++ ++ +++l+l++  f +s  + l   ++ +l++ +++++ ++++ ++fp + rg ++g++s+ + +G ++
  KHJ34108.1 414 SIMGIPGSILAYYTVDLpyIGRRGTMIVSTFICGIMLFLFTisFQAS--FQLGISAVESLFQNVMYAVLYSYTPEVFPTSIRGTGTGIASLLNRVGGLC 510
                 566678888889999976369999************44444344244..4699999******************************************* PP

       MFS_1 137 gpllgglla.sslgWravfyilaivsllafvlfllllp 173
                 +p++++ +  ++     + ++ + + l afv + l+l+
  KHJ34108.1 511 APIIAANVPlENP--NIPIFVSGSLILSAFVAM-LFLT 545
                 ****997774554..455666666666666632.3333 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.4  24.9   4.5e-23   2.7e-19      46     443 ..     135     551 ..      96     553 .. 0.79

  Alignments for each domain:
  == domain 1  score: 69.4 bits;  conditional E-value: 4.5e-23
                 .HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHH CS
    Sugar_tr  46 vlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyq 144
                  ++  +++ ++vG  +Gs+f g  +d++GRk ++  + +++ i ++  +aa+   ++  ++v  + + +gvG+   +   +  E+ p +  g+l +l  
  KHJ34108.1 135 NRVRYTTCYMFVGLCFGSIFWGVGSDIVGRKIAFNLTLLIAGIFGIAVGAAP---TWTTVCVIYFGIAFGVGGNLPVDGALFLEFLP-NASGRLLTLLS 229
                 445568999*******************************************...9*****************************88.679******** PP

                 HHHHHHHHHHHHHHHHH..HTSS-TTHHHHHHHCCHHHHHHHHHHGGG...S---HHHHHHTT-HHHHHHHHHHHHHC...................HH CS
    Sugar_tr 145 laitfGilvaaifglgl..nktsnadgwrillglqlvpallllilllf...lPESPrylvekgkeeeakevlaklrge...................ed 219
                  ++ +G+lv++++ +g+   ++++++gwr+ ++l    +l+++++ +f   l ESP  l+ +g++ ea +v+  +  +                   e+
  KHJ34108.1 230 IWWPMGQLVSSVSSWGFigGNFTSDKGWRYSCYLMGSVTLIMFLAQFFlfhLLESPKLLLARGRQAEAVAVVHGMAHKnrtttwlteeilnelggypEP 328
                 ****************965455558*********99999999986555222689****************99884333234566777777777777666 PP

                 HHHHHHHHHHHHHHHHH......HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTT.HHHHSS-THH.......HHHHHHHHHHHHHHHHHHHH CS
    Sugar_tr 220 adrelaeekdsleaeqeee.kaswkellssktvrqrlligvvlqifqqltGinaimyyspt.ifenlglsks.......llvtiivgvvnfvatfvaif 309
                 ++++l   k++++ + ++   + +++l+ +k++ + +++   ++++    G+  +  + p+ + +    + +       +   +i++++ +  ++ a +
  KHJ34108.1 329 NQPQLLTRKEMIRSKLSAFsFKRIRPLFATKGMARNTTMLWYCWLAIG-MGYPLFNGFLPQyLSKGQKATGEvvseyttYRNYVIISIMGIPGSILAYY 426
                 67777777777776655448999*********8888777777766655.5555555555540544444444466666644445788999999999999* PP

                 HHH..HS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHH CS
    Sugar_tr 310 lvd..rfGRRtllllGaagmaicfvilgivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllf 406
                 +vd  ++GRR +++++++++ i++++++   + ++a+       +  +i  +  lf+  +  v++ + +E+fp+s+R++++ ia       n + +l+ 
  KHJ34108.1 427 TVDlpYIGRRGTMIVSTFICGIMLFLFT---ISFQAS-------FQLGISAVESLFQNVMYAVLYSYTPEVFPTSIRGTGTGIASL----LNRVGGLCA 511
                 ***666*****************99997...444444.......345555555556666666********************9985....566789999 PP

                 HHHHCHHH..T-HHHHHHHHHHHHHHHH.HHHHS--STT- CS
    Sugar_tr 407 piiteaig..ggyvflvfaglavlfiif.vfffvpetkgr 443
                 pii+ ++   ++ + ++  g ++l++++ ++f ++et gr
  KHJ34108.1 512 PIIAANVPleNPNIPIFVSGSLILSAFVaMLFLTIETRGR 551
                 ***9999998999999999998888776256677999987 PP

>> MFS_1_like  MFS_1 like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.6      0.38   2.3e+03     153     379 ..     150     164 ..     100     204 .. 0.69
   2 !   19.1   6.4   7.9e-08   0.00047     228     357 ..     366     503 ..     259     511 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.38
  MFS_1_like 153 fGsvGyaifafitGilidhysvnllpysallyvlaallvisllvvlilnetekesklkvtkslqvllnilknpeviifllvalilgmswgiienFlflY 251
                 fGs+ +++ + i+G                                                                                     
  KHJ34108.1 150 FGSIFWGVGSDIVG------------------------------------------------------------------------------------- 163
                 33333333333322..................................................................................... PP

  MFS_1_like 252 LkelgasntllGslvalgvvaeiplfffaeklleklGhvklliiallayilrfllyaiienawlvlpievLhgisfgllwaaaveyvskiapksleatg 350
                                                                                                                    
  KHJ34108.1   - ---------------------------------------------------------------------------------------------------   -
                 ................................................................................................... PP

  MFS_1_like 351 qgllsglyfglGralGsliGGllwdlksa 379
                                              
  KHJ34108.1 164 ----------------------------R 164
                 ............................2 PP

  == domain 2  score: 19.1 bits;  conditional E-value: 7.9e-08
  MFS_1_like 228 iifllvalilgmswgiienFlflYL.kelgasntllGslvalgvvaeiplfffaeklle.......klGhvklliiallayilrfllyaiienawlvlp 318
                  ++    l +gm + +++ Fl  YL k  +a++++++ +++ +    i +  +   +l        ++G +  +i++ ++  + ++l  i  +a++ l 
  KHJ34108.1 366 TMLWYCWLAIGMGYPLFNGFLPQYLsKGQKATGEVVSEYTTYRNYVIISIMGIPGSILAyytvdlpYIGRRGTMIVSTFICGIMLFLFTISFQASFQLG 464
                 3444455668999************999***********99987766666655555554111111167889999999999999999************* PP

  MFS_1_like 319 ievLhgisfgllwaaaveyvskiapksleatgqgllsgl 357
                 i + +++   +++a++ +y  +++p s+++tg g+ s l
  KHJ34108.1 465 ISAVESLFQNVMYAVLYSYTPEVFPTSIRGTGTGIASLL 503
                 ***********************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      246  (0.0137208); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 4148.20
//
Query:       KHJ34109.1  [L=788]
Description: putative rna-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.6e-09   37.5   0.0    3.3e-09   36.4   0.0    1.6  1  RRM_1          RNA recognition motif. (a.k.a. RRM, RBD, or RN
    0.00015   21.3   0.0    0.00043   19.9   0.0    1.8  2  RRM_5          RNA recognition motif. (a.k.a. RRM, RBD, or RN


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.0   3.7e-13   3.3e-09       1      70 []     344     407 ..     344     407 .. 0.92

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 3.7e-13
                 EEEESE.TTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnL.ppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 lf+gnL ++ vt+++L  +F ++G+i  i++          ++f++F  ++   +Al++ +g +++gr+++
  KHJ34109.1 344 LFIGNLpSEKVTKRDLFHIFYHYGKIAQISIKQ-------AYGFIQFLHSDHCYRALDCEQGSEVRGRKMH 407
                 8*****6678****************7777777.......7***************************975 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1      0.71   6.4e+03      83     104 ..     117     138 ..     112     148 .. 0.75
   2 !   19.9   0.0   4.8e-08   0.00043      25     108 ..     340     420 ..     329     442 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.71
       RRM_5  83 HLnnaklfgkrlevalSKqqav 104
                  Ln++  +  +l+ ++S q++ 
  KHJ34109.1 117 SLNGTVTHSLHLNHTFSDQNSA 138
                 6899999999999999999863 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 4.8e-08
       RRM_5  25 egsVllVyglepdkvnldklFnlfclYgnvervkflktkketalvqmgdasaveravqHLnnaklfgkrlevalSKqqavseke 108
                  gs l++ +l  +kv+   lF +f  Yg ++++ +   k+ + ++q   + +  ra++  ++ ++ g+++++ +SK q+ + + 
  KHJ34109.1 340 MGSRLFIGNLPSEKVTKRDLFHIFYHYGKIAQISI---KQAYGFIQFLHSDHCYRALDCEQGSEVRGRKMHLEISKPQKNVRNA 420
                 57789999************************988...899***********************************66544322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (788 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       718  (0.0400469); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.25s 00:00:00.88 Elapsed: 00:00:00.41
# Mc/sec: 5826.90
//
Query:       KHJ34110.1  [L=507]
Description: hypothetical protein EV44_g1109 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.1e-198  659.8   0.0   2.5e-198  659.6   0.0    1.0  1  Glyco_transf_20  Glycosyltransferase family 20
     0.0036   17.7   0.0     0.0082   16.6   0.0    1.6  1  Glyco_trans_1_4  Glycosyl transferases group 1
  ------ inclusion threshold ------
       0.14   11.9   0.1       0.31   10.7   0.1    1.6  1  Glyco_transf_5   Starch synthase catalytic domain


Domain annotation for each model (and alignments):
>> Glyco_transf_20  Glycosyltransferase family 20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  659.6   0.0  4.1e-202  2.5e-198       2     473 ..      13     474 ..      12     475 .. 0.99

  Alignments for each domain:
  == domain 1  score: 659.6 bits;  conditional E-value: 4.1e-202
                      -EEEEEEE-SECEEE-S.SCG..EEECCGSSHHHHHCCCHHCCC-EEEEEEECCES-CCC..HCCCCHHHCCCCCEEEEEE-HHHHHHHCCCHH CS
  Glyco_transf_20   2 klvvvsnrlplklereseeekeeyelkkssgglvsalkglkeetevvwvgwlgvevdeseeakekvskeleekfsvvpvflsdekveeyyngfs 95 
                      +l+ vsnrlp++++r++ +++  y +++ssgglv+ l+gl ++t+++w+gw+g+ev+e e  +e++ k+l+e++++vpvf+++e ++++yngfs
       KHJ34110.1  13 RLLLVSNRLPITIKRKE-DGS--YAFSMSSGGLVTGLSGLLKTTTFQWYGWPGLEVPEAE--AEQMAKRLSEDYEAVPVFIDEELADRHYNGFS 101
                      6799************8.888..9************************************..999***************************** PP

                      HHCHHHHHTT-GG....G----HHHHHHHHHHHHHHHHHHHCC--TT-EEEEESGGGTTHHHHHHHCCTT...SEEEEEE-S----HHHHTTST CS
  Glyco_transf_20  96 ksvLWpllHYklpdsseekefersawdaYvkvnklFAdkiveeikdgdliwvhDYhLmllPellRkkled...akigfflHiPFPsseifriLp 186
                      +s+LWpl+HY++     e +f++ +w+aY +vn+lFA+ ++++++dgdliwvhDYhLmllPe+lRk+++    +kigfflH+PFPssei+riLp
       KHJ34110.1 102 NSILWPLFHYHPG----EITFDELSWKAYIEVNRLFAKVVAQDVQDGDLIWVHDYHLMLLPEMLRKEISSkkdVKIGFFLHTPFPSSEIYRILP 191
                      *************....**************************************************987777********************* PP

                      THHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSSEEEECTTEEEEETTEEEEEEE------HHHHHHHCCSCHHHHHHHHHHHHT.TTSEEEE CS
  Glyco_transf_20 187 vreeilegllgadliGFhtedyarhFlsccsrllgleveskrggveykgrkvsvkalpigidverlesalkkesvsekvkelkerfenkkklil 280
                      vr+e+l+++l++dliGFht+dyarhFls+csr+l  +++++  gve +g++++v a+pigid+e++ + l+k+s++ +++ l+ +fe+ +kli+
       KHJ34110.1 192 VRQELLKSVLHCDLIGFHTYDYARHFLSSCSRILASQTTPN--GVEHNGKHITVAAFPIGIDPEKFVEGLQKKSIQDRIAVLERKFEG-VKLIV 282
                      *****************************************..8******************************************99.8**** PP

                      EEEEC-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEEEEB-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEEES---HHHHHHHHHH-S CS
  Glyco_transf_20 281 gvDrlDyikGvkqkllaferfLeeypelrgkvvlvqiavpsredveeyqelekeveelvgrINgefgtldytPvvylersldfeeliallaaad 374
                      gvDrlDyikG++qk++a+e fL+e+pe++gk+vlvq+a+psr+dveeyq+l+  v+elvgrINg+fgt++++P+++l++s++feel+al+a++d
       KHJ34110.1 283 GVDRLDYIKGIPQKFHALEVFLTEHPEWIGKIVLVQVAIPSRQDVEEYQNLQTVVNELVGRINGKFGTIEFMPIHFLHQSVNFEELTALYAVSD 376
                      ********************************************************************************************** PP

                      EEEE--SSBSS-CHHHHHHHCSTTT--EEEEETTBGGGGT-TTTSEEE-TT-HHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHT-HHHHHHHH CS
  Glyco_transf_20 375 vllvtslRdGmnlvakeyvvcqqekkgvLiLSeFaGaaqsLkdaailvNPwdieevaeaikeaLkmseeerkkrekkllkqvskhdvqsWaesf 468
                      ++lv+s+RdGmnlv++ey+++q++++gv+iLSeF+GaaqsL+ +a++vNPw +ee+a+ai++a++ms+e+r++ +kkl k+v k++++ W e+f
       KHJ34110.1 377 ACLVSSTRDGMNLVSYEYIATQRKRHGVMILSEFTGAAQSLN-GALIVNPWSTEELAQAIHKAVTMSPEQRESSFKKLEKYVFKYTSAWWGENF 469
                      ******************************************.88************************************************* PP

                      HHHHH CS
  Glyco_transf_20 469 lselk 473
                      +sel+
       KHJ34110.1 470 VSELA 474
                      ***97 PP

>> Glyco_trans_1_4  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.4e-06    0.0082      58     131 ..     357     438 ..     292     440 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.4e-06
                      EEE---...THHHHHHHH-SEEEE--..---SHHHHHHHHTT-....EEEE-TGGGTTT--TTSS.EE--TT-HHHHHHHHHHH CS
  Glyco_trans_1_4  58 eftGfv...edlaellaaadvfvaPs..egfglkllEamaagl....pvVatdvggiaevvgeng.llvppgdpealaeailrL 131
                      +f+ +    e+l +l+a +d +++ s   g++l+ +E+ a ++     ++ ++  g+a+    ng l+v+p ++e+la+ai + 
       KHJ34110.1 357 HFLHQSvnfEELTALYAVSDACLVSStrDGMNLVSYEYIATQRkrhgVMILSEFTGAAQ--SLNGaLIVNPWSTEELAQAIHKA 438
                      44444348899***************966***********7664444577777778888..667747789***********875 PP

>> Glyco_transf_5  Starch synthase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   5.2e-05      0.31     116     170 ..     131     178 ..     101     216 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 5.2e-05
  Glyco_transf_5 116 alfsraalelleklgwkpdvihahDWhtalvpallkelykerglfkkiktvftiH 170
                      lf++++++ ++      d+i +hD+h +l+p +l++     ++ k++k+ f +H
      KHJ34110.1 131 RLFAKVVAQDVQD----GDLIWVHDYHLMLLPEMLRKEI---SSKKDVKIGFFLH 178
                     3566666666666....6******************984...3457788888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      551  (0.0307323); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.39
# Mc/sec: 3915.55
//
Query:       KHJ34111.1  [L=315]
Description: putative letm1-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-15   57.2   2.2    4.8e-12   45.8   1.7    2.1  2  LETM1     LETM1-like protein


Domain annotation for each model (and alignments):
>> LETM1  LETM1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   1.2e-05      0.21       8     109 ..      75     185 ..      70     192 .. 0.82
   2 !   45.8   1.7   2.7e-16   4.8e-12     166     267 ..     195     304 ..     170     305 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 1.2e-05
       LETM1   8 elkhyvkGtkllfadvkisvkllvkllkgke...........LsrrEreqlkrttaDllrlvPfsvfiivPfaelllpvllklFPnlLpstFeskkqke 95 
                  l+ y +G+k ++++ k s+ ++  + +++e           +sr E ++l+r   Dl r+  f +++++ f e++ p+l+    n+ p t  +++q +
  KHJ34111.1  75 YLQFYKVGIKNIYYNYKASLPIKELIDSKYEgsisqavnanaISRSEFQLLTRNWHDLKRVPLFGLMFAI-FGEFT-PLLVIAIGNVVPLTCRTPTQIR 171
                 567778899999999999999988887787788889999999***************9997666666666.99975.8888888999999999999999 PP

       LETM1  96 eklkkrlkarleva 109
                 +++k+  ++r + +
  KHJ34111.1 172 KERKRLEESRYKAF 185
                 99988777776655 PP

  == domain 2  score: 45.8 bits;  conditional E-value: 2.7e-16
       LETM1 166 ltLdnlsrkqlkalckllslqpfg.......tdnllryrlrkklreikedDkaikre.GvdsLseeeLqeacrsRGlraaglseeelreqLeqWlelsl 256
                   L+ l  +ql  ++  l+l++ +       +  +l+ +++++++ + +dD++i+   Gv+++s++e++ a  +RG+++ g  e++lr++L+ Wl l+ 
  KHJ34111.1 195 KGLSALRLQQLMLINSSLGLSSRMwnlfggpPAMILTGKIKRRMEYLSNDDRLIEISgGVKKMSTREVEMALVERGIDVIGRLETDLRHDLKSWLRLRR 293
                 5678888888888888888888776666666777**********************99***************************************** PP

       LETM1 257 kkkvpsslLlL 267
                 ++  p+  LlL
  KHJ34111.1 294 DELYPYERLLL 304
                 *9999988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       513  (0.0286129); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2449.72
//
Query:       KHJ34112.1  [L=161]
Description: hypothetical protein EV44_g0085 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00082   20.0   1.7     0.0012   19.5   1.7    1.3  1  VanZ      VanZ like family
  ------ inclusion threshold ------
      0.073   12.7   0.1        5.2    6.6   0.0    2.1  2  Saf_2TM   SAVED-fused 2TM effector domain
        5.1    6.7   6.3        8.1    6.1   0.9    2.7  3  DUF4131   Domain of unknown function (DUF4131)


Domain annotation for each model (and alignments):
>> VanZ  VanZ like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   1.7     2e-07    0.0012      61     123 ..      41     109 ..       7     112 .. 0.75

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 2e-07
        VanZ  61 lfvplGfllplllkkk....flkvlllgf.llslsiElhQlfvp.gRsfdvdDvilntlGallGillyl 123
                  f+ l  +++++l  +    f +++l +  +l +++E++Q ++  g s d+  v+ n +G l+++ l++
  KHJ34112.1  41 TFFILTTCFYWILDTSrrrsFNFTILTCTgILGVGFEFLQSLLSnGHSLDLYQVLANLIGSLTALTLCS 109
                 34444333444443333344655666666599************9*****************9998876 PP

>> Saf_2TM  SAVED-fused 2TM effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.005        30      70      90 ..      36      56 ..      18      66 .. 0.71
   2 ?    6.6   0.0   0.00087       5.2      55     106 ..      79     131 ..      63     145 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.005
     Saf_2TM 70 iilvigvllivvGavllilry 90
                 + +i+++++++++++++   
  KHJ34112.1 36 PLHAITFFILTTCFYWILDTS 56
                567999**********87554 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.00087
     Saf_2TM  55 evsfssse.ipeivlaiilvigvllivvGavllilryvneakrqskkkvivIE 106
                   s+ s++ + ++ ++++++ig+l+ ++   +   r++  ++  ++ kv++ +
  KHJ34112.1  79 LQSLLSNGhSLDLYQVLANLIGSLTALTLCSWYHTRMLGRKRLAKQYKVVATD 131
                 4577777779***************99999*******8888888888888765 PP

>> DUF4131  Domain of unknown function (DUF4131)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1     0.038   2.3e+02      31      55 ..       5      29 ..       2      38 .. 0.75
   2 ?    6.1   0.9    0.0014       8.1      14      58 ..      41      88 ..      36      97 .. 0.63
   3 ?    1.3   0.1      0.04   2.4e+02      36      56 ..     100     120 ..      78     147 .. 0.53

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.038
     DUF4131 31 rvllllllllllallgfalrapqpn 55
                  +++ +++ll++++++ l+++qp 
  KHJ34112.1  5 LPFAGSFIFLLAITGYASLSTHQPR 29
                5567777888888888888888875 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0014
     DUF4131 14 lllllllllllrr...rprrrvllllllllllallgfalrapqpnand 58
                 +++l+ ++++     r+r   +++l+   +l++++ +l+++  n ++
  KHJ34112.1 41 TFFILTTCFYWILdtsRRRSFNFTILTCTGILGVGFEFLQSLLSNGHS 88
                455666666666655566666677777777777777776666655554 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.04
     DUF4131  36 lllllllallgfalrapqpna 56 
                  +l +l+++++++ r + + +
  KHJ34112.1 100 GSLTALTLCSWYHTRMLGRKR 120
                 233333333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       558  (0.0311228); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.21s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 1316.02
//
Query:       KHJ34113.1  [L=1079]
Description: putative bromodomain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-18   65.6   0.2    8.1e-18   64.3   0.2    1.7  1  Bromodomain    Bromodomain
    1.8e-07   31.1   0.0    4.1e-07   29.9   0.0    1.6  1  Bromo_TP       Bromodomain associated
  ------ inclusion threshold ------
      0.037   14.2   0.0       0.16   12.1   0.0    2.1  2  Bromo_TP_like  Histone-fold protein
       0.11   12.1   0.3       0.23   11.1   0.3    1.4  1  FdhD-NarQ      FdhD/NarQ family
        1.4    8.2  11.8       0.67    9.3   8.7    2.0  2  Neuregulin     Neuregulin intracellular region


Domain annotation for each model (and alignments):
>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.3   0.2   2.3e-21   8.1e-18       2      73 ..     288     360 ..     287     371 .. 0.91

  Alignments for each domain:
  == domain 1  score: 64.3 bits;  conditional E-value: 2.3e-21
                  HHHHHHBHTTT.CGGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSH CS
  Bromodomain   2 ekilsellehk.laepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyng 73 
                  ek+lsel+     ++pFl  v+++  pdyy +ik+P+dL t+ kkl+  +Yks a+f  dl l++sN+ kyn 
   KHJ34113.1 288 EKVLSELKAMTeYSAPFLTRVNKRDAPDYYNIIKHPMDLGTMTKKLKTLTYKSKAEFVTDLDLIWSNCLKYNA 360
                  5778888877757899*******************************************************97 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   0.0   1.2e-10   4.1e-07       3      46 ..     730     773 ..     728     780 .. 0.92

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 1.2e-10
                 HHHHHHHHHHHHHHHHHT-SEE-HHHHHHHHHHHHHHHHHHHHH CS
    Bromo_TP   3 larsllkvvvsqileeaGfdsaeesaLEtLteiaqkYirelgeq 46 
                 +++++l+++v++++++aGf+++++sa++  t+ia +Y  +l+++
  KHJ34113.1 730 VCKKALQRSVAKVCYAAGFEELQPSAIDVITDIASDYFGKLAQT 773
                 68999***********************************9987 PP

>> Bromo_TP_like  Histone-fold protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0       4.3   1.6e+04      93     112 ..     501     520 ..     498     523 .. 0.79
   2 ?   12.1   0.0   4.4e-05      0.16       1      41 [.     733     773 ..     733     816 .. 0.83

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 4.3
  Bromo_TP_like  93 aveedeslleiLkvlpknhl 112
                    a++ d+sl++ L + p++  
     KHJ34113.1 501 AMDIDKSLINGLSLTPNEDV 520
                    788899***99999998765 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 4.4e-05
  Bromo_TP_like   1 KilklvivEillQvGferiseqslniltdllkyyiekillk 41 
                    K l+ +++ ++   Gfe     +++++td+   y  k+ + 
     KHJ34113.1 733 KALQRSVAKVCYAAGFEELQPSAIDVITDIASDYFGKLAQT 773
                    7799***************************9999988765 PP

>> FdhD-NarQ  FdhD/NarQ family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.3   6.3e-05      0.23      48     144 ..     193     291 ..     179     294 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6.3e-05
                 EEEETTTEEEE-S...........---------------.---.....--H-----------EEGGGHHHHHHHHHTS-SHHHHHS--EEEEEEE.TTE CS
   FdhD-NarQ  48 ievdedeasvavatra..kaedkeerrtakrvvtsgCglcgkes..leelletlelpesdlklsaeallrlmdalrekqelfketggvHaaalfdadge 142
                  +++e+e+++  + ++  +++++ +++  ++ + s+  l g +s  l++l++++ l++++++ s ++l +lm+++r++ + +++   vH+  l++a+++
  KHJ34113.1 193 QKLEESEKQIDAEINHagTTSSN-NTNGEHHGSLSSANL-GASSltLKHLIARIDLKRDQVRASDAELRSLMNEVRKNRSKWASEENVHQEELYEAAEK 289
                 44444444444444443133333.333333344444445.6666446777*******99*******************************999997776 PP

                 EE CS
   FdhD-NarQ 143 ll 144
                 +l
  KHJ34113.1 290 VL 291
                 65 PP

>> Neuregulin  Neuregulin intracellular region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   8.7   0.00019      0.67     225     320 ..      61     156 ..      54     216 .. 0.76
   2 ?   -2.2   0.3      0.55     2e+03     247     299 ..     227     280 ..     163     311 .. 0.56

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00019
  Neuregulin 225 rqkseeeysqaqqqrnsylkesagslpssPlrivedeeYettqeyessleqpkrsstnsrrarrsklnghvaqreeaardsssesslseseteeer 320
                 +q +eee  q+++ +n++ +  ++ lps+P+r  ++++Y+   e e ++  p+++++++  + ++kl+   + +  +++++ s++   +s++ e+ 
  KHJ34113.1  61 AQGKEEEADQQTTPENAAIEPVKECLPSKPIRNIDEDNYDDEDEDEETQCLPEKNQVTNVLQSQNKLELSFDSEIPSVKETISTAGNDQSKSSENV 156
                 55667777777777778888899*****************************99999999999********9999999999999999999887654 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.55
  Neuregulin 247 agslpssPlrived.eeYettqeyessleqpkrsstnsrrarrsklnghvaqre 299
                 + +l +s l++       +  +++  ++++  rs +n+ r +rsk  ++ + ++
  KHJ34113.1 227 SANLGASSLTLKHLiARIDLKRDQVRASDAELRSLMNEVRKNRSKWASEENVHQ 280
                 444444444444433445555555556666666666666666666555433332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1079 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1434  (0.0799822); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.84u 0.24s 00:00:01.08 Elapsed: 00:00:00.42
# Mc/sec: 7756.43
//
Query:       KHJ34114.1  [L=191]
Description: putative peptidyl-trna hydrolase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-14   52.6   0.0    6.3e-14   51.9   0.0    1.3  1  RF-1      RF-1 domain


Domain annotation for each model (and alignments):
>> RF-1  RF-1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.9   0.0   3.5e-18   6.3e-14       7      72 ..      70     162 ..      65     182 .. 0.79

  Alignments for each domain:
  == domain 1  score: 51.9 bits;  conditional E-value: 3.5e-18
                 --GGGEEEEEE---SSSSSSGCSSSCEEEE..EETTT.........................TEEEEEEECSSSHHHHHHHHHHHHHHHHHH...H CS
        RF-1   7 idekdleidtfrssGaGGQnVNktesaVrl..thlpt.........................gvivvecqeeRsqekNrekAlerLkaklke...k 72 
                 +++k  + +++r+sG+GGQ+ Nkt+s+++                                 ++i+++c+++Rsq +N+++  erL ++l e   k
  KHJ34114.1  70 LPDKIAKTTFSRASGPGGQKTNKTSSKATTswP---VesllkyiprvlhadleksryfvassQSILIKCDTHRSQASNKAETHERLFKELIEiyhK 162
                 567777899*******************99541...334677777799999*********9988************************99774322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1455.31
//
Query:       KHJ34115.1  [L=218]
Description: hypothetical protein EV44_g3662 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.069   13.2   0.6       0.13   12.4   0.6    1.5  1  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.6     7e-06      0.13       3      15 ..     173     185 ..     171     185 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7e-06
                 TSSSSSSSSTTTT CS
     zf-CCHC   3 CynCGepGHiard 15 
                 C  CGe GH ard
  KHJ34115.1 173 CIACGEYGHSARD 185
                 557*********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       431  (0.0240393); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1708.56
//
Query:       KHJ34116.1  [L=110]
Description: hypothetical protein EV44_g6113 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.014   14.7   0.0      0.016   14.5   0.0    1.0  1  MCH       Cyclohydrolase (MCH)
      0.047   14.3   0.3      0.076   13.6   0.3    1.5  1  SlyX      SlyX


Domain annotation for each model (and alignments):
>> MCH  Cyclohydrolase (MCH)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   1.8e-06     0.016     142     222 ..      12      92 ..       5     101 .. 0.93

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.8e-06
                 --HHHHHHHHHHHTS-GGGEEEEEE-SSSHHHHHHHHTTHHHHHHHHHHHTT--GGGEEEEEEEEE-----SSHHHHHHHH CS
         MCH 142 PdeevvekvaeecgvepenvtllvaptaSlaGsvqvaaRvvevalhkleelgfdlekivsavgtaPiapvakdelkamgrt 222
                 P+++  +++a++ +++ ++++ +  + + l ++v    R+v + +  l e++  l++i++ + +a i pv+ ++ + m r 
  KHJ34116.1  12 PNKRPQSTIAQNFSIDLHDLFKISNSISDLHATVYAKKRAVYTQTSELREIERRLREIEERLTSAGIQPVSLNHNHNMRRQ 92 
                 78888899***************************************************************9999999775 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.3   8.5e-06     0.076      18      56 ..      37      75 ..      31      99 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 8.5e-06
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXXX CS
        SlyX 18 tieeLndvvaeqqqqidrlqrqlrllaerlkeleessga 56
                 i +L ++v++  + +  ++ +lr++++rl+e+ee+  +
  KHJ34116.1 37 SISDLHATVYAKKRAVYTQTSELREIERRLREIEERLTS 75
                688899999999999999999999999999998887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (110 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1127  (0.0628591); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 819.88
//
Query:       KHJ34117.1  [L=730]
Description: putative hec ndc80p family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-59  199.7   1.8    5.1e-59  198.3   1.8    1.8  1  Ndc80_HEC        HEC/Ndc80p family
    7.3e-05   22.8  16.8    7.3e-05   22.8  16.8    3.7  3  TPR_MLP1_2       TPR/MLP1/MLP2-like protein
  ------ inclusion threshold ------
      0.046   14.4   1.2      0.046   14.4   1.2    4.8  5  DUF4404          Domain of unknown function (DUF4404)
       0.17   10.7  47.4       0.47    9.3  13.2    3.1  3  Spc7             Spc7 kinetochore protein
       0.35   10.4  46.8       0.18   11.4  16.2    2.9  2  Filament         Intermediate filament protein
       0.38   10.2  20.2      0.026   14.0   2.7    3.7  4  FliD_C           Flagellar hook-associated protein 2 C-termin
        4.7    7.3   8.3       0.48   10.5   2.6    2.2  2  tRNA_lig_kinase  tRNA ligase kinase domain
        4.9    7.4  33.5        0.5   10.6   4.5    4.2  4  FliJ             Flagellar FliJ protein
        7.5    6.2  42.7          2    8.1   9.7    3.8  3  Lebercilin       Ciliary protein causing Leber congenital ama
        9.8    5.5  44.9       0.41   10.1  14.3    3.5  3  Golgin_A5        Golgin subfamily A member 5


Domain annotation for each model (and alignments):
>> Ndc80_HEC  HEC/Ndc80p family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  198.3   1.8   2.8e-62   5.1e-59       2     151 ..     126     279 ..     118     281 .. 0.95

  Alignments for each domain:
  == domain 1  score: 198.3 bits;  conditional E-value: 2.8e-62
   Ndc80_HEC   2 rrssvnsstskasffsesekaasverDprplrdksfqseliqellefLkennfe....hsisaktlksPsqkdfssifkfLykrldpsyefqkkieeev 96 
                 +r+s+n+ +s++sff+++++aa +++Dprplrd+s+q+++ qell+f+++nnfe    h+++++++ksP++kdfs++f++Ly+++dpsy+f+k+i++ev
  KHJ34117.1 126 SRTSTNGVMSHQSFFQQATQAAGIPKDPRPLRDRSYQNKIGQELLDFMSANNFEmemkHHLTQNSVKSPTAKDFSYMFQWLYHKIDPSYRFKKNIDQEV 224
                 46666669******************************************************************************************* PP

   Ndc80_HEC  97 vkilkelrYPfaesisKsqlaAvgtphtwptllaaLhWlvelaklleelsesktd 151
                 +++l +lrYP+ +si+Ks+laAvg+ ++w+ +l++LhW+++la+++e++  + +d
  KHJ34117.1 225 PPLLIQLRYPYHKSITKSSLAAVGSANSWHYFLGLLHWMMQLAQIMENYGANMYD 279
                 *************************************************999887 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.5     0.037        66      53      82 ..     338     367 ..     334     387 .. 0.71
   2 !   22.8  16.8   4.1e-08   7.3e-05       3     114 ..     382     489 ..     380     493 .. 0.91
   3 ?    0.7  15.2      0.28   5.1e+02       4      87 ..     602     686 ..     598     705 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.037
  TPR_MLP1_2  53 aedvkelqalreelnelkaeiaelkaeaes 82 
                 a  ++elq l +e+++l++ei+ l+++  +
  KHJ34117.1 338 ARYLDELQILESEYQRLQKEIKVLEKSGSD 367
                 666789999999999999999999887555 PP

  == domain 2  score: 22.8 bits;  conditional E-value: 4.1e-08
  TPR_MLP1_2   3 lksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreelnelkaeiaelkaeaesakaeleeseesweeqkeel 101
                 + ++ee  +++++++e++ea++q lqe++ k + ++kea++  er  +++a d + ++  +++++++++e++ l++  es +++++es+ +++e++ e 
  KHJ34117.1 382 KVKFEEFENRMNQKSEKYEARVQFLQEEIDKVTLEWKEANN--ERSNLQQAVDDQGIS--KTDIDRMTSERERLQKGIESMTQKIDESKRKLAEKEGEA 476
                 66789999*********************************..888888887777776..789************************************ PP

  TPR_MLP1_2 102 ekelselekried 114
                 +++l+elek ++ 
  KHJ34117.1 477 DEKLEELEKLVDK 489
                 *******998776 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.28
  TPR_MLP1_2   4 ksleeeikslkeekeeaeaklqklqedlekqaeiakeaqqkYerelvkhaedvkelqalreeln.elkaeiaelkaeaesakael 87 
                 +  ++e+++l+ +  +ae++ +k +e +++q+    +  +k e+el k  +d++e  +l e+ + + + e+++l  +a+s+++el
  KHJ34117.1 602 EDKKSEVEALEHRVRAAEEEYEKTKEIITTQKLASDTQIEKMEKELAKMRSDLTESIQLMEQREmNSNIEYEQLSLRANSLRQEL 686
                 5567888888888888888888888888888888888888888888888887777666666664145568888888888888877 PP

>> DUF4404  Domain of unknown function (DUF4404)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       9.1   1.6e+04      40      62 ..     311     335 ..     307     337 .. 0.60
   2 ?    1.7   1.8      0.23     4e+02      10      62 ..     352     401 ..     341     414 .. 0.80
   3 ?    0.4   3.1      0.59   1.1e+03      21      61 ..     439     481 ..     424     491 .. 0.51
   4 ?   14.4   1.2   2.5e-05     0.046       3      63 ..     567     625 ..     565     626 .. 0.93
   5 ?    0.9   2.2      0.39   7.1e+02      13      75 ..     635     698 ..     631     700 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 9.1
     DUF4404  40 edaaaeeee..laerlneaverFee 62 
                 eda++++++  la  +  +++ Fe 
  KHJ34117.1 311 EDAHDDDQDrvLAPHIDAMAKDFEI 335
                 4444444445788888888888886 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.23
     DUF4404  10 eeLeqnesldeetralLeslaedieellaeedaaaeeeelaerlneaverFee 62 
                 + L+++ ++ e++ ++L +l+++ +  + eed+ + ee +++r+n+  e++e+
  KHJ34117.1 352 QRLQKEIKVLEKSGSDLVTLDRNFK--IMEEDKVKFEE-FENRMNQKSEKYEA 401
                 5688999999999999999999998..66666666665.9**********997 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.59
     DUF4404  21 etralLeslaedieellaeedaaaeeee..laerlneaverFe 61 
                 ++ ++++s +e +++ +++ +++ +e++  lae+  ea e+ e
  KHJ34117.1 439 TDIDRMTSERERLQKGIESMTQKIDESKrkLAEKEGEADEKLE 481
                 4455555555555555555444444444444444444444333 PP

  == domain 4  score: 14.4 bits;  conditional E-value: 2.5e-05
     DUF4404   3 elLekLheeLeqnesldeetralLeslaedieellaeedaaaeeeelaerlneaverFeee 63 
                 + L +L++e+++  +++ ++  +L +l + i+e+l++++++ e+  l+ r++ a e++e++
  KHJ34117.1 567 SGLISLRKEISERRTASMDEVMKLYDLLDGIKEALEDKKSEVEA--LEHRVRAAEEEYEKT 625
                 66889***********************************9888..************975 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.39
     DUF4404  13 eqnesldeetralLeslaedieellaeedaaaeeee.laerlneaverFeee.HPklagvlreil 75 
                 ++++++ e+ +++L+++++d+ e ++  ++++ +++   e+l   ++   +e H +++++l++i+
  KHJ34117.1 635 ASDTQI-EKMEKELAKMRSDLTESIQLMEQREMNSNiEYEQLSLRANSLRQElHCEIEKILNDII 698
                 544444.4455679999999999999999888888777788888887777665888888888887 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3  13.2   0.00026      0.47     169     281 ..     344     454 ..     325     456 .. 0.84
   2 ?    8.9  17.8   0.00034       0.6     143     252 ..     370     478 ..     368     499 .. 0.73
   3 ?    8.7  16.5   0.00038      0.69     167     300 ..     575     704 ..     562     709 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00026
        Spc7 169 lpeleeekaeleeeleklqeaaeelesid..keeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwse 265
                 l+ le+e+++l++e++ l++   +l ++d   + +ee + +++e ++ ++   ++ ++ +++++ l+e+i++++ + +e+++e ++ ++ ++  +g+s+
  KHJ34117.1 344 LQILESEYQRLQKEIKVLEKSGSDLVTLDrnFKIMEEDKVKFEEFENRMN---QKSEKYEARVQFLQEEIDKVTLEWKEANNERSNLQQAVD-DQGISK 438
                 567899999*********99999999998523457788999999999998...556667788888999999999999999999999999998.89**** PP

        Spc7 266 sevsrlkeevkaleel 281
                 ++++r+++e ++l++ 
  KHJ34117.1 439 TDIDRMTSERERLQKG 454
                 ************9985 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00034
        Spc7 143 gleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelke 241
                 +l++n++++eedk + e+ e+ +++  +++e++ + l+ee++k   + +e ++ ++ +L+++ ++    k++i++   e ++lq+ +e+ ++ki+e k 
  KHJ34117.1 370 TLDRNFKIMEEDKVKFEEFENRMNQKSEKYEARVQFLQEEIDKVTLEWKE-ANNERSNLQQAVDDQGISKTDIDRMTSERERLQKGIESMTQKIDESKR 467
                 6899***************************************9998877.555777777777777777777777777777777777777777766655 PP

        Spc7 242 qkseleeeiae 252
                 + +e e e  e
  KHJ34117.1 468 KLAEKEGEADE 478
                 54443322222 PP

  == domain 3  score: 8.7 bits;  conditional E-value: 0.00038
        Spc7 167 ellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwse 265
                 e+ ++ ++  +e+++ ++ l   +e le+ +k e+e+l ++++++++e+e+ k e+   ++q+ +++++ie+++++ +++++++ e+ +++e++++ s+
  KHJ34117.1 575 EISERRTASMDEVMKLYDLLDGIKEALED-KKSEVEALEHRVRAAEEEYEKTK-EI--ITTQKLASDTQIEKMEKELAKMRSDLTESIQLMEQREMNSN 669
                 44444555555666666666665555544.78899999999999999999333.33..45667778899****************************** PP

        Spc7 266 sevsrlkeevkaleeltgwkivslsgstleltyrs 300
                  e ++l  + ++l +++ ++i ++ ++ ++++++ 
  KHJ34117.1 670 IEYEQLSLRANSLRQELHCEIEKILNDIIKFKVHI 704
                 *************************9999998765 PP

>> Filament  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5  22.7     0.025        45     125     287 ..     325     492 ..     320     495 .. 0.71
   2 ?   11.4  16.2    0.0001      0.18     143     287 ..     568     713 ..     559     725 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.025
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXX...XX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HH CS
    Filament 125 kvesLkeelaflkkvheeEvkelqkqvs.eqvlvevdaarkld...Lt...eilkeiraqyeelaeknreeaeewykskleelqeaaeknsealrsake 216
                 +++++ ++ ++    + +E++ l+++ +  q  + v ++++ d   L+   +i++e + ++ee  ++ ++++e  y+++++ lqe+++k + + ++a++
  KHJ34117.1 325 HIDAMAKDFEISNARYLDELQILESEYQrLQKEIKVLEKSGSDlvtLDrnfKIMEEDKVKFEEFENRMNQKSE-KYEARVQFLQEEIDKVTLEWKEANN 422
                 5778888888888888899999988887666666666777777555333336899999999998777666655.6999999999999999999999999 PP

                 HHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 217 eitelrrqiqsl...eieleslkkqkasleaqlaeleerleaeleklqeklseleeelaeireemarqlreYqe 287
                 e ++l++ ++     +++++ + ++++ l++ ++ + ++    +++ ++kl+e+e e  e  ee+++ ++ Y++
  KHJ34117.1 423 ERSNLQQAVDDQgisKTDIDRMTSERERLQKGIESMTQK----IDESKRKLAEKEGEADEKLEELEKLVDKYNN 492
                 999999999886222456777777777777777665555....5555666666666666666666666666665 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.0001
                 XXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHHHHH CS
    Filament 143 Evkelqkqvseqvlvevdaarkld.....Lteilkeiraqyeelaeknreeaeewykskleelqeaaeknsealrsakeeitelrrqiqsleieleslk 236
                  +  l+k++se+++ ++d++ kl      ++e+l++ +++ e+l ++  + aee y++  e ++++   ++ +++++++e++++r  +   +i+l +++
  KHJ34117.1 568 GLISLRKEISERRTASMDEVMKLYdlldgIKEALEDKKSEVEALEHRV-RAAEEEYEKTKEIITTQKLASDTQIEKMEKELAKMRSDLT-ESIQLMEQR 664
                 5668999************988755888999**********9986665.579999**999999************************96.589****** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 237 kqkasleaqlaeleerleaeleklqeklseleeelaeireemarqlreYqe 287
                 ++++++e   + l  r ++ +++l+ +++++ +++ + + +++++l++Y+ 
  KHJ34117.1 665 EMNSNIEY--EQLSLRANSLRQELHCEIEKILNDIIKFKVHIQKNLEDYEG 713
                 ****9986..567788889999999************************85 PP

>> FliD_C  Flagellar hook-associated protein 2 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       1.2   2.2e+03     194     219 ..     342     367 ..     316     394 .. 0.54
   2 ?   -0.2   0.3       0.3   5.3e+02     209     237 ..     384     412 ..     360     415 .. 0.80
   3 ?   14.0   2.7   1.4e-05     0.026     186     240 .]     438     492 ..     420     492 .. 0.87
   4 ?    5.3   2.3    0.0062        11     180     233 ..     610     663 ..     566     671 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.2
                 HHHHHXXXXHHHHHHHHHHHHHCHHH CS
      FliD_C 194 tasknltkqikdldkkiedldkrlet 219
                  + + l+ + ++l+k+i+ l+k+ ++
  KHJ34117.1 342 DELQILESEYQRLQKEIKVLEKSGSD 367
                 33334555555555555555555444 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.3
                 HHHHHHHCHHHHHHHHHHHHHHHHHHHHH CS
      FliD_C 209 kiedldkrletleerlkkqfaalekavsk 237
                 k e++++r++++ e+++++ + l++ ++k
  KHJ34117.1 384 KFEEFENRMNQKSEKYEARVQFLQEEIDK 412
                 67899999999999999998888776665 PP

  == domain 3  score: 14.0 bits;  conditional E-value: 1.4e-05
                 STT.SHHHHHHHHXXXXHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
      FliD_C 186 kssngtlqtasknltkqikdldkkiedldkrletleerlkkqfaalekavsklna 240
                 k++ + ++++ ++l+k i+++++ki++ +++l ++e +  ++ ++lek+v+k+n+
  KHJ34117.1 438 KTDIDRMTSERERLQKGIESMTQKIDESKRKLAEKEGEADEKLEELEKLVDKYNN 492
                 555567789999*****************************************96 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.0062
                 HHHHHHSTT.SHHHHHHHHXXXXHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH CS
      FliD_C 180 llksyvkssngtlqtasknltkqikdldkkiedldkrletleerlkkqfaalek 233
                 +l+  v++ ++  ++ ++ +t+q+   d++ie+++k+l +  + l++ ++ +e+
  KHJ34117.1 610 ALEHRVRAAEEEYEKTKEIITTQKLASDTQIEKMEKELAKMRSDLTESIQLMEQ 663
                 566677788888889999999999999****************99999999986 PP

>> tRNA_lig_kinase  tRNA ligase kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.6   0.00027      0.48      41      94 ..     352     406 ..     341     476 .. 0.75
   2 ?   -1.9   0.3       1.7     3e+03      66      96 ..     647     677 ..     621     703 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00027
                      -HHHHHHHTTSSTT--EEEEES---SHHHHHHHHHHHHHH.HHHH--TT-EEEEE CS
  tRNA_lig_kinase  41 klvkealellkkdeskvvlvDrnnhqkreRkqlfeeidel.keeylsydvnvkvv 94 
                      + +++ +++l+k++s +v +Drn + ++e k  fee+++  +++  +y+++v+++
       KHJ34117.1 352 QRLQKEIKVLEKSGSDLVTLDRNFKIMEEDKVKFEEFENRmNQKSEKYEARVQFL 406
                      5567889*****************************9865144555677777765 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.7
                      SHHHHHHHHHHHHHHHHHH--TT-EEEEEEE CS
  tRNA_lig_kinase  66 qkreRkqlfeeidelkeeylsydvnvkvval 96 
                       +++R++l e+i+ ++++ ++ +++   ++l
       KHJ34117.1 647 LAKMRSDLTESIQLMEQREMNSNIEYEQLSL 677
                      4567888888888888877766555544444 PP

>> FliJ  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   8.2    0.0059        11       6      94 ..     343     429 ..     339     434 .. 0.79
   2 ?    3.5   4.3     0.045        80      29      98 ..     425     489 ..     421     493 .. 0.69
   3 ?   10.6   4.5   0.00028       0.5      28     109 ..     573     649 ..     567     650 .. 0.85
   4 ?   -0.0   1.5      0.54   9.7e+02      12      48 ..     638     676 ..     631     711 .. 0.51

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0059
        FliJ   6 eLaeaqrelqqaeekleeleqyrqeyqkqlsgeaqglsaaelrnyqafisaldeaiaqqkqelaqaekqvekareewqearqerkklek 94 
                 eL+  + e+q+ ++++  le+  +++    ++    +  ++  ++++f ++++++ ++++  ++ ++++++k   ew+ea+ er  l+ 
  KHJ34117.1 343 ELQILESEYQRLQKEIKVLEKSGSDLVTLDRNFK--IMEEDKVKFEEFENRMNQKSEKYEARVQFLQEEIDKVTLEWKEANNERSNLQQ 429
                 5666677777777777777777777733333333..557778899***************************************98876 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.045
        FliJ  29 qeyqkqlsgea.q.glsaaelrnyqafisaldeaiaqqkqelaqaekqvekareewqearqerkklekLker 98 
                 +++    +++    g+s  ++    + +++l++ i++ +q+++ +++++ +++ e   a  +++ lekL ++
  KHJ34117.1 425 SNL----QQAVdDqGISKTDIDRMTSERERLQKGIESMTQKIDESKRKLAEKEGE---ADEKLEELEKLVDK 489
                 333....333333379999999999999999999999999999999988888875...55556666666655 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00028
        FliJ  28 rqeyqkqlsgeaqglsaaelrnyqafisaldeaiaqqkqelaqaekqvekareewqearqerkklekLkerekkeeqkeenr 109
                 r+e +++  +++      e +++   ++ ++ea++  k+e++ +e++v +a+ee+ + +    + ++  +++++++ ke+++
  KHJ34117.1 573 RKEISERRTASM-----DEVMKLYDLLDGIKEALEDKKSEVEALEHRVRAAEEEYEKTKEIITTQKLASDTQIEKMEKELAK 649
                 455555555555.....999***********************************999999999999999999999998876 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 0.54
        FliJ  12 relqqaeekleeleqyrqeyqkqlsgea.q.glsaaelr 48 
                 ++++++e++l+++++ + e  + ++++  + +++ ++l 
  KHJ34117.1 638 TQIEKMEKELAKMRSDLTESIQLMEQREmNsNIEYEQLS 676
                 445555555555555555554444444333344444443 PP

>> Lebercilin  Ciliary protein causing Leber congenital amaurosis disease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   8.0    0.0015       2.7     109     189 ..     334     420 ..     316     424 .. 0.77
   2 ?    6.2   7.8     0.004       7.1      80     142 ..     407     471 ..     407     492 .. 0.86
   3 ?    8.1   9.7    0.0011         2     114     188 ..     582     656 ..     563     660 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0015
  Lebercilin 109 kLsedknLaereeLqkk...LeeleakleekeekikeLerkleleek...sfrrqlaaekkktkeaqeevkalqeeierlkqklkeK 189
                 ++s+++ L+e + L+++   L++  + le++  ++ +L r+ + +e+   +f+   ++ ++k  +++++v+ lqeei++++ + ke 
  KHJ34117.1 334 EISNARYLDELQILESEyqrLQKEIKVLEKSGSDLVTLDRNFKIMEEdkvKFEEFENRMNQKSEKYEARVQFLQEEIDKVTLEWKEA 420
                 5788889999999988722255555567899999*******9998872225666677778899999**************9998886 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.004
  Lebercilin  80 qekerelekklkekeaellrlkdklkk..lkkLsedknLaereeLqkkLeeleakleekeekike 142
                 qe+ +++  + ke+++e  +l++++++   +k   d+   ere+Lqk +e++++k++e+++k+ e
  KHJ34117.1 407 QEEIDKVTLEWKEANNERSNLQQAVDDqgISKTDIDRMTSERERLQKGIESMTQKIDESKRKLAE 471
                 67888888999999999999999986533799999*************************99875 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.0011
  Lebercilin 114 knLaereeLqkkLeeleakleekeekikeLerkleleeksfrrqlaaekkktkeaqeevkalqeeierlkqklke 188
                  +++e  +L   L+ +++ le+k+ +++ Le++++ +e+++++  +  + ++ +  ++++++++e+ +++++l e
  KHJ34117.1 582 ASMDEVMKLYDLLDGIKEALEDKKSEVEALEHRVRAAEEEYEKTKEIITTQKLASDTQIEKMEKELAKMRSDLTE 656
                 468899999999**********************************************************99976 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2  10.5      0.63   1.1e+03      61     135 ..     342     422 ..     310     434 .. 0.61
   2 ?    7.2   6.2    0.0017       3.1      35      98 ..     427     490 ..     423     496 .. 0.86
   3 ?   10.1  14.3   0.00023      0.41      67     169 ..     566     667 ..     545     686 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.63
   Golgin_A5  61 eelqklnqqieqlrtelqdleaqqq......aeaeslreqlqeleeqleeerkakeeveaelerlkeelryleeelvrska 135
                 +elq l+++ ++l++e++ le++ +       +++ ++e   ++ee  +  ++++e++ea ++ l+ee++ +  e +++ +
  KHJ34117.1 342 DELQILESEYQRLQKEIKVLEKSGSdlvtldRNFKIMEEDKVKFEEFENRMNQKSEKYEARVQFLQEEIDKVTLEWKEANN 422
                 677777777777777777777764311111145666677777777777777777777777777777777776655443322 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0017
   Golgin_A5  35 geeglesstalsaeldelkqerdllreelqklnqqieqlrtelqdleaqqqaeaeslreqlqel 98 
                  +++++ + ++++++d +++er+ l++ +++++q+i++ + +l++ e ++ +  e+l++ + ++
  KHJ34117.1 427 LQQAVDDQGISKTDIDRMTSERERLQKGIESMTQKIDESKRKLAEKEGEADEKLEELEKLVDKY 490
                 567777888999**********************************999988888887776665 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.00023
   Golgin_A5  67 nqqieqlrtelqdleaqqqaeaeslreqlqeleeqleeerkakeeveaelerlkeelryleeelvrskatlqsrikdrekeieklrnqlttkslsssse 165
                 ++ + +lr+e+ +  +    e+ +l + l  ++e+le ++++ e++e+ ++  +ee + ++e  + +k  + ++i++ eke+ k+r++lt + +   ++
  KHJ34117.1 566 KSGLISLRKEISERRTASMDEVMKLYDLLDGIKEALEDKKSEVEALEHRVRAAEEEYEKTKEIITTQKLASDTQIEKMEKELAKMRSDLTESIQL-MEQ 663
                 5667799**********************************************************************************987554.344 PP

   Golgin_A5 166 sele 169
                  e++
  KHJ34117.1 664 REMN 667
                 4444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (730 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2343  (0.130682); expected 358.6 (0.02)
Passed bias filter:                      556  (0.0310112); expected 358.6 (0.02)
Passed Vit filter:                        97  (0.00541023); expected 17.9 (0.001)
Passed Fwd filter:                        55  (0.00306766); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.27u 0.34s 00:00:01.61 Elapsed: 00:00:00.54
# Mc/sec: 4073.66
//
Query:       KHJ34118.1  [L=325]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2283.77
//
Query:       KHJ34119.1  [L=71]
Description: hypothetical protein EV44_g3537 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       302  (0.0168442); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 523.19
//
Query:       KHJ34120.1  [L=547]
Description: putative apoptosis-inducing factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-45  156.1   0.3    1.6e-45  155.6   0.3    1.2  1  Pyr_redox_2      Pyridine nucleotide-disulphide oxidoreductas
      2e-14   53.9   3.4    2.3e-13   50.5   0.2    2.7  2  Pyr_redox        Pyridine nucleotide-disulphide oxidoreductas
    3.6e-14   52.5   0.0    1.3e-13   50.7   0.0    1.9  1  Rieske           Rieske [2Fe-2S] domain
    9.6e-06   26.1   0.0    2.1e-05   25.0   0.0    1.6  1  Reductase_C      Reductase C-terminal
    0.00015   21.5   5.4      0.054   13.1   0.0    4.1  5  DAO              FAD dependent oxidoreductase
    0.00051   20.1   0.3        6.6    6.7   0.0    3.3  3  NAD_binding_9    FAD-NAD(P)-binding
     0.0013   17.9   0.0        1.5    7.9   0.0    2.4  3  K_oxygenase      L-lysine 6-monooxygenase (NADPH-requiring)
      0.005   16.4   0.2      0.023   14.3   0.1    1.9  2  DUF1188          Protein of unknown function (DUF1188)
  ------ inclusion threshold ------
      0.036   14.5   0.2        4.5    7.8   0.0    2.4  2  NAD_binding_7    Putative NAD(P)-binding
      0.046   12.8   0.8        5.9    5.9   0.0    2.7  3  GIDA             Glucose inhibited division protein A
      0.064   12.9   0.0       0.17   11.5   0.0    1.7  1  GATase_3         CobB/CobQ-like glutamine amidotransferase do
      0.064   12.6   1.6        4.3    6.6   0.0    2.9  4  2-Hacid_dh_C     D-isomer specific 2-hydroxyacid dehydrogenas
       0.16   10.8   0.8        2.4    6.9   0.0    2.2  2  Trp_halogenase   Tryptophan halogenase
       0.18   12.1   0.8        3.4    7.9   0.1    2.4  2  TrkA_N           TrkA-N domain
        0.7   10.1   2.6       0.67   10.2   0.1    2.1  2  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.6   0.3   1.4e-48   1.6e-45       2     294 .]     132     437 ..     131     437 .. 0.89

  Alignments for each domain:
  == domain 1  score: 155.6 bits;  conditional E-value: 1.4e-48
                  SEEEE--SHHHHHHHHHHHH..HTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHHHHHHCHHHHCCCCHCCTCEEEEESCEEEEETEEECTCEEE CS
                  xxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaq..agakvtlvelegtclnggcllskallgvaedaeiasevvkklnqgielllgeevvkidpgkkkvklekkkegdeek 97 
                  +vv++GgG A+la+ + l++   ++ + ++ +eg+++ ++  lskal+  +++   + e   +++ +ie++++ ev++idp  k v+    ++g   +
   KHJ34120.1 132 NVVIVGGGSAALATIEALREngFNGIIKMITDEGYLPIDRTKLSKALVDDPSKIFLRDEDWFRYG-SIEVIKD-EVTSIDPLLKIVVT---RGG--DS 222
                  79******************655888*********************999999877776544444.4899999.*********55555...444..48 PP

                  EEESEEEE---EEE-BCTCTTC.TTBE.ECCSECHHHHHHCCSS-T..SEEEEES-SHHHHHHHHHHHHHT-EEEEEESSSSSS.TTS-HHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxx RF
  Pyr_redox_2  98 iaydklvlAtGssprdlgipGvaenvg.klvrtldsaealklkllp..krivvvGgGyiGvElAaalaklgkevtlveardrll.raldkelsaalee 191
                    y+klvlAtG++pr+l   G +e +g + +rt ++++a++++     k+iv++G+++iG+E+A a ++   ++t+v + + +l r ++ke+++ +++
   KHJ34120.1 223 HMYNKLVLATGGTPRRLLHSGFNELCGiFPLRTAHHTKAINKAIGSkgKKIVIIGSSFIGLEVANAVSRD-NDTTVVGRDEAPLaRIMGKEIGQLIQK 319
                  99***************999**99886145799999999988888899*****************96665.78999********************** PP

                  HHHHTTEEEEESCEEEEEEETTE...EEE.EEETTSCEEEESEEEE-S-EEES-HHCSHCCT-EEEETTEEE--TTSBES.STTEEE-GGGC...... CS
                  xxxxxxxxxxxxxxxxxxxxxxx...xxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx...... RF
  Pyr_redox_2 192 alekeGvevklgtsvkeidgnge...kle.vvledgeeidadlvvvavGvrpstelleeklglelderggivvdeflrtn.vpgiyaiGDva...... 278
                  a+ek+Gv+++l ++v e+ + ++   k+  v+l+dg++++adlv++++Gv+p t+ l+++  ++l ++  i+++e+  +   ++iya+GD+a      
   KHJ34120.1 320 AFEKNGVKFHLAAEVIEAFPSQSdssKVGgVQLKDGTKLEADLVILGAGVTPATSYLKNNNIIKLLKDSSIKTNEYFVVDgQQDIYAVGDIAtfpyhg 417
                  ***************999988887554449**************************9988889999***********9988***************** PP

                  ....TECCSS--HHHHHHHH CS
                  ....xxxxxxxxxxxxxxxx RF
  Pyr_redox_2 279 ....ggkggpelaqaAvqqG 294
                      g+  ++e++ +A+++G
   KHJ34120.1 418 pagnGTPLRIEHWNVAQNAG 437
                  ***99999********9987 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.3       0.1   1.3e+02       1      20 [.     132     151 ..     132     163 .. 0.86
   2 !   50.5   0.2     2e-16   2.3e-13       1      80 [.     272     354 ..     272     355 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.1
                 EEEEECSSHHHHHHHHHHHH CS
   Pyr_redox   1 kvvvvGgGyiglElAgalae 20 
                 +vv+vGgG  +l   +al+e
  KHJ34120.1 132 NVVIVGGGSAALATIEALRE 151
                 59*******99988888876 PP

  == domain 2  score: 50.5 bits;  conditional E-value: 2e-16
                 EEEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSS.TTSSHHHHHHHHHHHHHTTEEEECSEEEEEEE..EETTS.EEEEEEET CS
   Pyr_redox   1 kvvvvGgGyiglElAgalaelgkkVtvversdkll.rllDeeaskilqeklekngievllntkveeie..gsedg.vesvklkd 80 
                 k+v++G+++iglE+A+a ++ + ++tvv r + +l r +++e+++++q+ +ekng++++l ++v e    +s++  v +v+lkd
  KHJ34120.1 272 KIVIIGSSFIGLEVANAVSRDN-DTTVVGRDEAPLaRIMGKEIGQLIQKAFEKNGVKFHLAAEVIEAFpsQSDSSkVGGVQLKD 354
                 79***************99865.*****************************************99875544445588888876 PP

>> Rieske  Rieske [2Fe-2S] domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.0   1.1e-16   1.3e-13      11      89 .]      15      96 ..       9      96 .. 0.86

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 1.1e-16
                C-TTCEEEEEETTEE...EEEEE-TTS-EEEEESC-TTTT-BCGGSEEETT.EEE-TTT--EEE.TTSBEEE-TTHHHEEEET CS
      Rieske 11 vpegdpltvkvggep...lvvlrdedgevyAlsdvCtHrgaplsegkidekgvleCpcHgwayd.adGkvikgPaprplatyp 89
                +++g+  +v+v g +   +++++  +ge+ A+   CtH gap+ +g ++ +g+++Cp+Hg++++  +G++ ++Pa ++l+t++
  KHJ34120.1 15 LNPGEKIEVEVEGVEngkVLLCNV-NGEISAIGSKCTHYGAPMVKGVLTLDGRITCPWHGACFKaSNGDIENAPALDALPTFK 96
                556666666666655555888996.***********************9999***************************9985 PP

>> Reductase_C  Reductase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   1.7e-08   2.1e-05       2      76 ..     458     532 ..     457     538 .. 0.91

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 1.7e-08
                  EEEEETTEEEEEEE-.-TT--EEEEEEETTTTEEEEEEEETTEEEEEEEES-HHHHHHHHHHTTTT----HHHHH- CS
  Reductase_C   2 fWSDqydlklQiaGl.atgadevvvRgdpeerafsvfylrdgrlvaveavnrprdlmaarrliaagasvdpaalaD 76 
                  fWS   + +l+++G  ++g+d ++++g+pee +f+v+y++++++vav +++    +++a +l+ +g  +++++l +
   KHJ34120.1 458 FWSA-LGSQLRYCGNpSNGWDGTIIKGQPEELKFVVYYTKGETVVAVGSIGFDPVVAQASELMRRGDMPSKTELLN 532
                  7775.5689*****955789***********************************************999998875 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   1.0       0.3   3.6e+02       2      14 ..     133     145 ..      51     151 .. 0.75
   2 ?    1.0   1.4      0.21   2.5e+02       2      22 ..     133     153 ..     132     164 .. 0.79
   3 ?    4.0   0.0     0.026        31     161     224 ..     198     257 ..     184     269 .. 0.76
   4 ?    1.2   0.1      0.18   2.2e+02       1      31 [.     272     302 ..     272     307 .. 0.89
   5 !   13.1   0.0   4.5e-05     0.054     151     205 ..     316     372 ..     304     418 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.3
                 EEEECTSHHHHHH CS
         DAO   2 vviiGGGiiGlst 14 
                 vvi+GGG + l+t
  KHJ34120.1 133 VVIVGGGSAALAT 145
                 6777777766666 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.21
                 EEEECTSHHHHHHHHHHHHTT CS
         DAO   2 vviiGGGiiGlstAyeLarrg 22 
                 vvi+GGG + l+t  +L + g
  KHJ34120.1 133 VVIVGGGSAALATIEALRENG 153
                 9***********988886555 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.026
                 -EEEESECEEEEEEEETCEEEEEEECT.EEEEEEEEEEE--GGGHH.HH.HTTCTTTSEEEEEEEEE CS
         DAO 161 veilegtevtgleeedgkvwgverttp.gendaadavVnaaGawsd.ll.gllkeldlpispvrgqv 224
                 +e+++  evt+++     ++ v  +t+ g  + ++++V+a+G   + ll  +++el + i p+r  +
  KHJ34120.1 198 IEVIKD-EVTSIDP---LLKIV--VTRgGDSHMYNKLVLATGGTPRrLLhSGFNEL-CGIFPLRTAH 257
                 577787.9999944...35555..778566577799******88887775555777.9999988655 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.18
                 EEEEECTSHHHHHHHHHHHHTT.EEEEESSSS CS
         DAO   1 dvviiGGGiiGlstAyeLarrg.Vtllekgdi 31 
                 ++viiG+  iGl +A + +r + +t++ ++ +
  KHJ34120.1 272 KIVIIGSSFIGLEVANAVSRDNdTTVVGRD-E 302
                 59****************999899999988.3 PP

  == domain 5  score: 13.1 bits;  conditional E-value: 4.5e-05
                 HHHHHHHHTT-EEEESECEEEE..EEEE.TCEEEEEEECTEEEEEEEEEEE--GGGHH CS
         DAO 151 alaraaealGveilegtevtgl..eeed.gkvwgverttpgendaadavVnaaGawsd 205
                  +++a+e++Gv++++ +ev +   ++ d  kv+gv + ++g++ +ad v++ aG+   
  KHJ34120.1 316 LIQKAFEKNGVKFHLAAEVIEAfpSQSDsSKVGGV-QLKDGTKLEADLVILGAGVTPA 372
                 57889***************95353333699****.655688844599******7643 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.1     0.038        46       1      19 [.     134     152 ..     134     166 .. 0.87
   2 !    6.7   0.0    0.0056       6.6     116     155 ..     197     234 ..     190     235 .. 0.89
   3 ?    5.5   0.0     0.013        16     108     154 ..     317     368 ..     308     370 .. 0.62

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.038
  NAD_binding_9   1 aivGaGprGlavlerLlar 19 
                    +ivG+G ++la++e+L ++
     KHJ34120.1 134 VIVGGGSAALATIEALREN 152
                    7**************9877 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0056
  NAD_binding_9 116 tvevhraevvdleeradgqavlladgaslaadaVvLAlGh 155
                    ++ev+++ev+++++  +   v++++g+s++++++vLA+G 
     KHJ34120.1 197 SIEVIKDEVTSIDPLLKI--VVTRGGDSHMYNKLVLATGG 234
                    6899********998665..889***************95 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.013
  NAD_binding_9 108 larl..pegvtvevh.raevvdlee.radg..q.avlladgaslaadaVvLAlG 154
                    ++++  ++g  v++h  aev++  + + d+  +  v l+dg++l+ad V+L  G
     KHJ34120.1 317 IQKAfeKNG--VKFHlAAEVIEAFPsQSDSskVgGVQLKDGTKLEADLVILGAG 368
                    444523334..444434455544431344433347999*************988 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0019       2.3     187     241 ..     126     179 ..     104     190 .. 0.68
   2 !    7.9   0.0    0.0012       1.5     131     215 ..     210     294 ..     188     305 .. 0.70
   3 ?   -2.9   0.0       2.3   2.8e+03     131     160 ..     346     371 ..     315     373 .. 0.51

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0019
  K_oxygenase 187 ellakkriaVvGsGqSaaeifedllrrqkkvelklvtrsealeplddspfvneif 241
                  + ++  ++++vG+G  a   +e l ++  +  +k++t  e++ p+d +++ + ++
   KHJ34120.1 126 SIANDVNVVIVGGGSAALATIEALRENGFNGIIKMIT-DEGYLPIDRTKLSKALV 179
                  367778999***9966666666665555556666655.67899*****9987765 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0012
  K_oxygenase 131 elltveskdaegeeeelearnlvlgvGtepk..iPevlekle...gkervvHsseylerkeellakkriaVvGsGqSaaeifedllrrqk 215
                  +ll++ ++  +g  +++  ++lvl++G++p   + + +++l+   +  +  H++ + + +    ++k+i+++Gs   + e+++ + r+++
   KHJ34120.1 210 PLLKIVVT--RG-GDSHMYNKLVLATGGTPRrlLHSGFNELCgifPLRTAHHTKAINKAI--GSKGKKIVIIGSSFIGLEVANAVSRDND 294
                  67777772..23.45677789******988544778899888554434445555555555..899***************9999888765 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 2.3
  K_oxygenase 131 elltveskdaegeeeelearnlvlgvGtep 160
                  ++  v+      + ++lea  ++lg G +p
   KHJ34120.1 346 KVGGVQL----KDGTKLEADLVILGAGVTP 371
                  3333333....2356777777777777776 PP

>> DUF1188  Protein of unknown function (DUF1188)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.73   8.7e+02     192     230 ..      89     129 ..      76     137 .. 0.80
   2 !   14.3   0.1   1.9e-05     0.023      36     125 ..     266     365 ..     247     398 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.73
                 EEEEEBB--HHH..HHHTS--HHHHHHHHTSBSEEEEESSH CS
     DUF1188 192 LYavpnleffEr..ilFkekdiekfleelekpAltvSslke 230
                 L a+p+++ fEr   +F   + e   ++  kp ++vSs+ +
  KHJ34120.1  89 LDALPTFKLFERngAVFISGNKEAIASSRRKPNIKVSSIAN 129
                 67889999998644799999999999999*********973 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 1.9e-05
                 HTT--E..EEEEEES-CCCHHHHHHHHCCCEEEEEEESSGG.GGGGSSST.............HHHHHHHHTTS---SEEEE---TT-S-HHHHTT--- CS
     DUF1188  36 leeeeleeknvlviGaYltGaaiakkLskkeevtlvDieph.lkellekd.............vefklsleevernadlviDltGlGGvdpeklsklna 120
                 +     + k++++iG+ + G  +a+++s++++ t+v  +++ l++++ k+             v+f+l  e +e  +    D + +GGv+ ++ +kl+a
  KHJ34120.1 266 IG---SKGKKIVIIGSSFIGLEVANAVSRDNDTTVVGRDEApLARIMGKEigqliqkafekngVKFHLAAEVIEAFP-SQSDSSKVGGVQLKDGTKLEA 360
                 33...3678*********************99999987654388888888899999888888878877777774444.457999999999999999988 PP

                 SEEEE CS
     DUF1188 121 kvliv 125
                 + +i+
  KHJ34120.1 361 DLVIL 365
                 87775 PP

>> NAD_binding_7  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.0    0.0038       4.5       7      32 ..     130     155 ..     127     226 .. 0.83
   2 ?    4.4   0.1     0.041        49       5      63 ..     268     329 ..     265     366 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0038
  NAD_binding_7   7 gkkvlvvGgGevAarkvrklleagak 32 
                    + +v++vGgG+ A+  ++ l e+g +
     KHJ34120.1 130 DVNVVIVGGGSAALATIEALRENGFN 155
                    668*****************998854 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.041
  NAD_binding_7   5 lkgkkvlvvGgGevAarkvrklleagakvtvvapevkeele.......elvklaeeelekdlegad 63 
                     kgkk++++G   ++++ ++ + +   + tvv  +    ++       e+ +l+++ +ek+  +++
     KHJ34120.1 268 SKGKKIVIIGSSFIGLEVANAVSRD-NDTTVVGRDE---APlarimgkEIGQLIQKAFEKNGVKFH 329
                    589*************988877776.9999999993...333346665555577777766644444 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.2       1.8   2.2e+03       2      11 ..     133     142 ..     132     155 .. 0.77
   2 ?    5.9   0.0     0.005       5.9     110     150 ..     197     234 ..     190     270 .. 0.87
   3 ?    4.5   0.0     0.013        16     125     163 ..     341     387 ..     303     413 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 1.8
                 EEEE-SSHHH CS
        GIDA   2 viViGgGhAG 11 
                 v+++GgG A 
  KHJ34120.1 133 VVIVGGGSAA 142
                 99*****995 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.005
                 TEEEEES-EEEEEECTTEEEEEEETTS-EEEECEEEE--TT CS
        GIDA 110 nleiieeeveeliveekkvkgvvtedgetikakavviatGt 150
                  +e+i++ev+++++    +k vvt+ g     ++ v+atG 
  KHJ34120.1 197 SIEVIKDEVTSIDP---LLKIVVTRGGDSHMYNKLVLATGG 234
                 79**********99...8999*******99999******97 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.013
                 T...TEEEEEEETTS-EEEECEEEE--TT.....-BT-EEEETTEEE CS
        GIDA 125 e...kkvkgvvtedgetikakavviatGt.....flkgkihigekel 163
                 +   +kv gv ++dg++++a+ v++ +G      +lk + +i+  + 
  KHJ34120.1 341 QsdsSKVGGVQLKDGTKLEADLVILGAGVtpatsYLKNNNIIKLLKD 387
                 2355899*********************7666667777666666555 PP

>> GATase_3  CobB/CobQ-like glutamine amidotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00014      0.17      30      72 ..     120     162 ..      95     167 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00014
    GATase_3  30 vplkdeslgedadlvilpGgkdtiqdlallresgldeaikeaa 72 
                  ++k +s+++d+++vi++Gg+  ++ +++lre+g++  ik   
  KHJ34120.1 120 PNIKVSSIANDVNVVIVGGGSAALATIEALRENGFNGIIKMIT 162
                 566778899*************************988777654 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       2.9   3.5e+03      35      61 ..     129     155 ..     112     160 .. 0.78
   2 ?    3.9   0.1     0.025        30      34      57 ..     268     292 ..     253     308 .. 0.77
   3 ?    6.6   0.0    0.0036       4.3      46     122 ..     312     390 ..     308     394 .. 0.74
   4 ?   -3.0   0.0       3.2   3.9e+03      65     101 ..     508     543 ..     503     544 .. 0.67

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.9
                   TTSEEEEES-SHHHHHHHHHHHHTT-E CS
  2-Hacid_dh_C  35 sgktvGiiGlGrIGqavakrlkafgmk 61 
                   ++  v i+G G+ + a+++ l++ g++
    KHJ34120.1 129 NDVNVVIVGGGSAALATIEALRENGFN 155
                   566899999999999999998877765 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.025
                   GTTSEEEEES-SHHHHHHHHHHH.H CS
  2-Hacid_dh_C  34 lsgktvGiiGlGrIGqavakrlk.a 57 
                    +gk++ iiG   IG +va+ ++  
    KHJ34120.1 268 SKGKKIVIIGSSFIGLEVANAVSrD 292
                   589****************988744 PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0036
                   HHHHHHHHHHHHTT-EEEEESSSHHHHH.CHHHHTCEECSHHHHHH.H-SEEEE-S--STTTTTSBSHHHHHCSTTTEE CS
  2-Hacid_dh_C  46 rIGqavakrlkafgmkviaydrskkkee.eeeelgvelvsleella.esDivslhlpltpetrhlinaeelakmkkgai 122
                   +IGq + k +++ g+k        ++   + ++ +v  v+l++  + e+D v+l + +tp+t  l n++ ++++k+++i
    KHJ34120.1 312 EIGQLIQKAFEKNGVKFHLAAEVIEAFPsQSDSSKVGGVQLKDGTKlEADLVILGAGVTPATSYLKNNNIIKLLKDSSI 390
                   588888888888888877665554432233444455555665554439***************************9987 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 3.2
                   ESSSHHHHHCHHHHTCEECSHHHHHHH-SEEEE-S-- CS
  2-Hacid_dh_C  65 ydrskkkeeeeeelgvelvsleellaesDivslhlpl 101
                   +d+   + +e  + g ++ s  ell++ Di+ + +p+
    KHJ34120.1 508 FDPVVAQASELMRRG-DMPSKTELLNKIDILQIGMPI 543
                   556555555444433.577889999999999888875 PP

>> Trp_halogenase  Tryptophan halogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.3     0.067        80       1      21 [.     132     152 ..     132     165 .. 0.80
   2 ?    6.9   0.0     0.002       2.4     158     208 ..     315     368 ..     310     377 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.067
                     EEEEE--SHHHHHHHHHHHHH CS
  Trp_halogenase   1 kivivGGGtaGwlaAaalaka 21 
                     ++vivGGG+a+  +  al++ 
      KHJ34120.1 132 NVVIVGGGSAALATIEALREN 152
                     69********99888888766 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.002
                     HHHHHHHHHCT-EEE.E--EEEE.EE-T.TS-EEEEEETTS-EEE-SEEEE-SG CS
  Trp_halogenase 158 kfLrrvaearGvtrv.egkvvev.qlde.dgrveslrledgreveadlfiDcsG 208
                     +++++  e++Gv+    ++v e+   +  + +v +++l+dg+++eadl+i   G
      KHJ34120.1 315 QLIQKAFEKNGVKFHlAAEVIEAfPSQSdSSKVGGVQLKDGTKLEADLVILGAG 368
                     56667777788885414444444133334899*****************96666 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.1      0.19   2.2e+02       1      22 [.     133     157 ..     133     179 .. 0.82
   2 ?    7.9   0.1    0.0029       3.4       1      39 [.     273     310 ..     273     324 .. 0.86

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.19
                 EEEES-SHHHHHHHHHHHHTT...E CS
      TrkA_N   1 iiiiGlGrvGrslaeeLsegg...k 22 
                 ++i+G G  + + +e L+e+g   +
  KHJ34120.1 133 VVIVGGGSAALATIEALRENGfngI 157
                 79***************99764432 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0029
                 EEEES-SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHH CS
      TrkA_N   1 iiiiGlGrvGrslaeeLseggkdvvvidkdeerveelre 39 
                 i+iiG + +G ++a+ +s+++ d +v+ +de+ ++++  
  KHJ34120.1 273 IVIIGSSFIGLEVANAVSRDN-DTTVVGRDEAPLARIMG 310
                 89*****************99.6*******999887755 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.3       1.8   2.1e+03       1      21 [.     133     153 ..     133     162 .. 0.86
   2 ?   10.2   0.1   0.00056      0.67       1      44 [.     273     312 ..     273     337 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.8
                      EEEE--SHHHHHHHHHHHCTC CS
  Sacchrp_dh_NADP   1 vliiGaGsvGqavaellarhf 21 
                      v+i+G+Gs + a++e l +++
       KHJ34120.1 133 VVIVGGGSAALATIEALRENG 153
                      79*********9999998775 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00056
                      EEEE--SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHH CS
  Sacchrp_dh_NADP   1 vliiGaGsvGqavaellarhfdvdaeitvadrskeklealaaka 44 
                      ++iiG+ ++G  va  ++r +d     tv++r+++ l+++  k+
       KHJ34120.1 273 IVIIGSSFIGLEVANAVSRDNDT----TVVGRDEAPLARIMGKE 312
                      89******************998....**********9998764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (547 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.38
# Mc/sec: 4265.45
//
Query:       KHJ34121.1  [L=290]
Description: putative catechol o-methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      9e-12   46.0   0.0    1.5e-11   45.2   0.0    1.4  1  Methyltransf_24  Methyltransferase domain
    3.4e-09   36.2   0.0    4.5e-09   35.8   0.0    1.1  1  Methyltransf_3   O-methyltransferase
  ------ inclusion threshold ------
       0.01   15.6   0.0      0.015   15.0   0.0    1.3  1  CmcI             Cephalosporin hydroxylase
      0.054   13.2   0.0      0.081   12.7   0.0    1.2  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl


Domain annotation for each model (and alignments):
>> Methyltransf_24  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   0.0   3.4e-15   1.5e-11       1     105 [.      94     203 ..      94     204 .. 0.82

  Alignments for each domain:
  == domain 1  score: 45.2 bits;  conditional E-value: 3.4e-15
  Methyltransf_24   1 vEiGvysGvstlwllralrrngagrlvavdhdpgaeeaaalare....aglddrvrlikads......eealaslaagsiDllfiDgghaaeav 84 
                      +E+G+y G+st+++++ l++ g +++++++ +p+   +a +a+     agl+d+vr+++++s      e+a+++l+  s+D++f+D  h + ++
       KHJ34121.1  94 MELGSYVGYSTVLFASVLKKIGGSSYISFEREPK---FASVAAAmvdlAGLSDIVRFVVGPSssslvsEHAAGRLN--SVDIVFFD--HYKPSY 180
                      59*******************************5...44444444446**************65555444555555..9*******..888888 PP

  Methyltransf_24  85 ledleal..lprlapggvvlfdD 105
                        dl+ l  l+++++g+v++ d+
       KHJ34121.1 181 VIDLKILesLNIIHEGTVLIADN 203
                      888876633789********998 PP

>> Methyltransf_3  O-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.8   0.0     1e-12   4.5e-09      28     162 ..      70     208 ..      49     230 .. 0.89

  Alignments for each domain:
  == domain 1  score: 35.8 bits;  conditional E-value: 1e-12
                     GGS--HHHHHHHHHHHHHHT--EEEEE--TTSHHHHHHHTTS-TT-..EEEEEES-HHHHHHHHHHHHHTT-GGGEEEEES-HHHHHHHHHTSSS CS
  Methyltransf_3  28 emevsvdegqfLslLvklvnakrvleiGvftGyslLatalalPeDG..kilaididreayeialkfiqkagvaekieliegdalkvLeelvkdkk 120
                      m+v+  +g  +  L++      ++e+G + Gys +  a  l + G    ++ + +++ + +a  +++ ag+ + + + +g++ + L       +
      KHJ34121.1  70 MMNVGERKGSCVVDLIERHKPAIMMELGSYVGYSTVLFASVLKKIGgsSYISFEREPKFASVAAAMVDLAGLSDIVRFVVGPSSSSLVSEHAAGR 164
                     68999999999999999999999*******************99873357888999999*************************99988888888 PP

                     ---EEEEEE-S-GGGHHHHHHHH..HHTEEEEEEEEEE-TTGGG CS
  Methyltransf_3 121 lpefDfifvDaDkssyvnyyekl..leLvkvGgliaiDntLWeG 162
                     l++ D++f D  k syv   ++l  l++++ G ++  Dn++  G
      KHJ34121.1 165 LNSVDIVFFDHYKPSYVIDLKILesLNIIHEGTVLIADNVIDPG 208
                     9***************99888644499************98655 PP

>> CmcI  Cephalosporin hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   3.4e-06     0.015      27     104 ..      84     162 ..      80     218 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 3.4e-06
        CmcI  27 liwelkPdliietGiahGGsalfsasllallkskrkvlaididir..eknrqaieahplasrieliegssvdpeiveqvk 104
                 li + kP +++e+G+  G s +++as+l++++++   ++ + + +  +   + ++   l++ + ++ g s ++ + e++ 
  KHJ34121.1  84 LIERHKPAIMMELGSYVGYSTVLFASVLKKIGGSSY-ISFEREPKfaSVAAAMVDLAGLSDIVRFVVGPSSSSLVSEHAA 162
                 78999**************************55543.3444333310333344445555566666666666555555554 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   1.8e-05     0.081      65     129 ..      81     148 ..      76     156 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.8e-05
                 HHHHTT--TT-EEEEES-TTSHHHHHHHHHHCTTC..EEEEEESBHHHHHHHHHHHHHCTTC.SEEEE CS
        PCMT  65 alellelkkgarvLevGsGsGyltavlarlvgekg..rvvsierikelveeakrnlkkldle.nvivv 129
                 +++l+e +k a ++e+Gs  Gy t+++a ++++ g    +s er +++++ a + +   +l+  v +v
  KHJ34121.1  81 VVDLIERHKPAIMMELGSYVGYSTVLFASVLKKIGgsSYISFEREPKFASVAAAMVDLAGLSdIVRFV 148
                 5677887888889*******************9987789***********999999988877344555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       315  (0.0175693); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2322.30
//
Query:       KHJ34122.1  [L=524]
Description: putative carbamoylphosphate synthase large subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.11   11.2   0.0       0.16   10.7   0.0    1.2  1  Salt_tol_Pase  Glucosylglycerol-phosphate phosphatase (Salt_t
       0.14   12.2   0.0       0.32   11.1   0.0    1.5  1  DUF5500        Family of unknown function (DUF5500)


Domain annotation for each model (and alignments):
>> Salt_tol_Pase  Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   1.8e-05      0.16      68     159 ..     100     186 ..      87     245 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 1.8e-05
  Salt_tol_Pase  68 keeglyLpGlaagGvqwqdrfgkvshpGvsdaelaflaavPelikelleeflkkllkelseeeieklieasvldnkvsPtinlnslfellkd 159
                      +++yL G    G+++ +++ ++ + G  ++ ++   +vP+ i+e ++ef++++++ +++e+i+  ++ + + + +    +  +l++ +++
     KHJ34122.1 100 VARTMYLGGCDVYGIDFDNKNRNLYF-GRFSTSIKRYISVPDPITEGVDEFISQVIEIIKNENINLWVSCTRVATPI----DDAKLADAIRK 186
                    56899************999988865.666677888889***********************999877655443333....33333333333 PP

>> DUF5500  Family of unknown function (DUF5500)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   3.6e-05      0.32      26      87 ..     369     435 ..     361     439 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.6e-05
     DUF5500  26 trrtrdgfcgrltsiatnsh.ytmfvldhgs.vri.erpsqs..evdcaslmetlkrirlrnswvas 87 
                  ++trdgf g+l  i  n   +t+ +l hg  v + +r  +s    + + ++et +r+++   w+a 
  KHJ34122.1 369 YQKTRDGFEGKLVPIECNPRcHTVTILFHGKeVELaDRYLESlyGKQNTPILETKHRVHVGHYWIAH 435
                 479*************997537999999996355424544441145677899999999999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (524 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3546.40
//
Query:       KHJ34123.1  [L=451]
Description: putative 2-epi-5-epi-valiolone synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.8e-53  179.3   0.0    1.1e-52  178.8   0.0    1.1  1  DHQ_synthase  3-dehydroquinate synthase
    1.1e-10   41.7   0.0    1.5e-10   41.2   0.0    1.2  1  Fe-ADH_2      Iron-containing alcohol dehydrogenase
  ------ inclusion threshold ------
      0.031   13.1   0.0      0.048   12.5   0.0    1.2  1  Fe-ADH        Iron-containing alcohol dehydrogenase


Domain annotation for each model (and alignments):
>> DHQ_synthase  3-dehydroquinate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.8   0.0   1.8e-56   1.1e-52       4     244 ..      83     332 ..      80     348 .. 0.95

  Alignments for each domain:
  == domain 1  score: 178.8 bits;  conditional E-value: 1.8e-56
                   E-SSGGGCCHHHHHHHHHHHHHTT--TT-EEEEEESHHHHHHHHHHHHHBTT--EEEEEE-SHHHHHTTTSSSEEEEEETTEEEEEEEE---SEEEE CS
  DHQ_synthase   4 vpdgeksKsletlekildalleakleRksllialGGGvvgDlaGfvAatylRGvrfvqvPttllaqvDssvGgKtainlplgKNliGafaqPkavli 100
                   ++ gek K+le+l  i++ +++ ++ Rk+ ++++GGG v+D+aGf+ a+y+R  +f+++Pttl++ +D+sv  K+a+n+ + KN +Ga++ P   ++
    KHJ34123.1  83 MEVGEKAKNLESLLGIVQSMTSFGIIRKEPVLVVGGGLVTDVAGFACACYRRTTNFIRIPTTLIGLIDASVSIKVAVNYGNYKNRLGAYHAPIWTFL 179
                   788********************************************************************************************** PP

                   EGGGGGGS-HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHC..........TTTHHHHHHHHHHHHHHHHHHHHHCCTTTTGGGGGGTTHHHHH CS
  DHQ_synthase 101 dlevLktLperelraGlaEviKyalikdeelfelleenaeallk..........eeeeealeeliarsievkaevveeDekekglralLnlGHtigH 187
                   d+++LktLp  ++r+G+aE+iK++ ++d + f++l +  e+l++           e ++ ++e+ + si    +  + + +e  l +++ +GHt + 
    KHJ34123.1 180 DFNFLKTLPISQVRNGFAELIKISSCADLKSFNSLDKYCEELIAtkfgrmpgsdPEIRRIADEINYDSIYEMLRLETPNLHELMLDRIIAYGHTWSP 276
                   ****************************************99999*****9998556778888889******************************* PP

                   HHHHHHTTTTS-HHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHTT---STTT CS
  DHQ_synthase 188 aiEallgyekllHGeaVaiGmvlaaelseklgllkkeeverllkllkklglpvslke 244
                     E l+++  l+HG+a++i+m+++a+l    gll++ee +rll+l++++gl ++++ 
    KHJ34123.1 277 YHELLSDP-PLRHGHAISIDMCYTATLGLDRGLLSEEEHTRLLTLFSRAGLSIDHPL 332
                   ********.******************************************998765 PP

>> Fe-ADH_2  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.2   0.0   2.6e-14   1.5e-10      17     188 ..      46     225 ..      31     254 .. 0.79

  Alignments for each domain:
  == domain 1  score: 41.2 bits;  conditional E-value: 2.6e-14
    Fe-ADH_2  17 lelkkvllvadentkkaagekveeslkeagikve..vveeveeeadleeveklveal...reketdlvvavGgGtiiDiakyv..saklnvpyvsvpTa 108
                 l++ +vl v d+n+k+++g+++++++++ +i ++  ++e  e++++le+   +v+ +      + + v+ vGgG + D+a ++   +++  +++ +pT+
  KHJ34123.1  46 LKWGRVLTVLDKNMKALYGDDIQKYFDHYKIPLTfhAMEVGEKAKNLESLLGIVQSMtsfGIIRKEPVLVVGGGLVTDVAGFAcaCYRRTTNFIRIPTT 144
                 46779************************9977521444344444555555555544222346778999***********98622689999******** PP

    Fe-ADH_2 109 aS..vDGfaspgaslvvdgkkrtvakaaaPlaviaDldvlaeAPrrllasGvGDllgkytaladwklanevseplaklsaam 188
                 +    D   s  +++   + k  +   +aP+  ++D ++l++ P + ++ G+++l+ k+++ ad k  n+++++  +l+a++
  KHJ34123.1 145 LIglIDASVSIKVAVNYGNYKNRLGAYHAPIWTFLDFNFLKTLPISQVRNGFAELI-KISSCADLKSFNSLDKYCEELIATK 225
                 9633677777777777778899997789**************************99.9999999999998888777777655 PP

>> Fe-ADH  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   8.1e-06     0.048      19     182 ..      46     193 ..      37     200 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 8.1e-06
                 TTT-..EEEEEEEHHHH.HH.THHHHHHHHHCTT-EEE.E.EEE.-S---HHHHHHHHTTS-TT.-...-EEEEEESHHHHHHHHHHHHHTT....... CS
      Fe-ADH  19 kklgakralivtdkgslkksglldkvlesleeagievt.vfdgv.epnptleeveeaaalareega...dvviavGGGsviDtAKaialllanpevedy 112
                  k g  r+l v dk++   + + d++++ +++ +i +t +  +v e+   le++  +++ + ++g+   + v+ vGGG v D+A  + +++++      
  KHJ34123.1  46 LKWG--RVLTVLDKNMK--ALYGDDIQKYFDHYKIPLTfHAMEVgEKAKNLESLLGIVQSMTSFGIirkEPVLVVGGGLVTDVAGFACACYRR------ 134
                 4555..9********64..55999***********999666666778888999999999999998644477*********************4...... PP

                 ...........--EEEEESS-S-...S-TT-SEEEEE.-TTSEEEEE-..SS--SEEEEEHHHHHHS-HHHHH CS
      Fe-ADH 113 lgegkakkkkalpliaiPTtaGt...GsevtplavitdeeegeklsifdpellPdlaivDpeltltlPkrvta 182
                           +  +i iPTt      +s   ++av +    + k  ++     P + ++D +++ tlP +++ 
  KHJ34123.1 135 ----------TTNFIRIPTTLIGlidASVSIKVAVNY---GNYKNRLG-AYHAPIWTFLDFNFLKTLPISQVR 193
                 ..........478999999974311022222333333...33444444.335677777777777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (451 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       346  (0.0192983); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3128.57
//
Query:       KHJ34124.1  [L=356]
Description: putative membrane associated chaperone [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-13   50.3   0.0    3.4e-13   49.5   0.0    1.4  1  DnaJ      DnaJ domain
  ------ inclusion threshold ------
       0.98    9.8   3.4        2.6    8.4   1.1    2.3  2  2TM       2TM domain


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.5   0.0   3.7e-17   3.4e-13       1      63 []      77     140 ..      77     140 .. 0.94

  Alignments for each domain:
  == domain 1  score: 49.5 bits;  conditional E-value: 3.7e-17
                 HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHH.HHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ   1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdp.eaeekFkeineAyevLsdpekRkqYD 63 
                 ++++iL+++++a+e eIk ++r+la  +HPDk ++++ + e  F ++  A ++L  p kR +Y+
  KHJ34124.1  77 NFFQILNLPETANEREIKTRFRRLAAVHHPDKVTNNSpSVEAYFVKLRLAQDTLLSPVKRFAYE 140
                 689****************************9866666**********************9995 PP

>> 2TM  2TM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.077   6.9e+02      51      70 ..      55      74 ..      51      79 .. 0.76
   2 ?    8.4   1.1   0.00029       2.6       8      52 ..     158     207 ..     153     212 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.077
         2TM 51 halkvFgtekffgkeWeerk 70
                 ++ v++ + ++ ++We r+
  KHJ34124.1 55 AVVTVYLLFTIYEADWEIRQ 74
                56778888889999999887 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00029
         2TM   8 keikgFyrhlvvYlivniflilinl......gsswflwpilfWgiglllha 52 
                 + ++gFyr l vYl    ++ ++ l      g++w  w ++++  ++ +h 
  KHJ34124.1 158 YLLQGFYRSLPVYLGSAFVMCFFGLlgyvtiGNFW-RWLAFICLGVFEFHM 207
                 5689*********9888877777666778887788.566666665566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2610.21
//
Query:       KHJ34125.1  [L=127]
Description: putative protein precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-42  144.1   0.0    1.6e-42  143.9   0.0    1.0  1  DUF2015   Fungal protein of unknown function (DUF2015)


Domain annotation for each model (and alignments):
>> DUF2015  Fungal protein of unknown function (DUF2015)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.9   0.0   8.8e-47   1.6e-42       2     112 .]      10     122 ..       9     122 .. 0.97

  Alignments for each domain:
  == domain 1  score: 143.9 bits;  conditional E-value: 8.8e-47
     DUF2015   2 lllvlvvatllyltrkkllpllpea..eeylysrlpssFeedieaGlsssnFdlseNiesgdsRaGLdeaakeeikkimkkrrvkFdeARliyteerlk 98 
                 ++++lvv t+ly+tr+++++llp    +++lysrlps F +die+Gl+s +Fdls+Ni++gdsR+GLd+ +k+ei+ imk+rrv+F+eAR+i+te r++
  KHJ34125.1  10 AFALLVVSTVLYFTRSMWTQLLPALsgSSFLYSRLPSAFISDIENGLTSPEFDLSSNIAAGDSRRGLDDISKKEIQVIMKSRRVNFNEARRIHTEARFA 108
                 578999*****************98888899******************************************************************** PP

     DUF2015  99 kngigpdGrPlDpk 112
                 kn+ig+dGrP+Dpk
  KHJ34125.1 109 KNNIGSDGRPRDPK 122
                 *************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 994.03
//
Query:       KHJ34126.1  [L=159]
Description: putative 60s ribosomal protein l28 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.3e-34  117.7   0.3    8.2e-34  116.8   0.0    1.5  2  Ribosomal_L28e  Ribosomal L28e protein family


Domain annotation for each model (and alignments):
>> Ribosomal_L28e  Ribosomal L28e protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.8   0.0   4.6e-38   8.2e-34       1     113 [.      12     131 ..      12     133 .. 0.95
   2 ?   -1.1   0.1      0.17   3.1e+03      67      86 ..     133     153 ..     131     158 .. 0.65

  Alignments for each domain:
  == domain 1  score: 116.8 bits;  conditional E-value: 4.6e-38
  Ribosomal_L28e   1 LiWelvrnnnsFlvktrtsnkqtFsrepyNltglhsrkysglanskavtVr..ee.kkgvvlvtkkkerahkpakawekvkls..knsrkalkqi 90 
                     LiWe++r +nsFlvk+ +s + +Fsr+p+Nlt++hsrky+g++n+kav++   e  k+g++l+tkk++  +kp++a+ ++ +   k+sr+++k +
      KHJ34126.1  12 LIWEVIRPQNSFLVKRASSGGVQFSRDPLNLTNVHSRKYAGFVNDKAVGILpiEGgKGGITLITKKTKFTQKPSSAIYTTVFGgnKTSRRTYKGV 106
                     8***************999********************************66335899************************************ PP

  Ribosomal_L28e  91 akll..kkyrpdlrkaalaRlskit 113
                      +++  + yr+dlr++a+aR+s+i+
      KHJ34126.1 107 VNTVvkSRYRSDLRAEAVARASAIR 131
                     *****8779**************97 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.17
  Ribosomal_L28e  67 ahkpakawekvkls.knsrka 86 
                     ++kp+  + k+kl+ ++++ka
      KHJ34126.1 133 SQKPKGDLPKKKLRgSKAKKA 153
                     678888888888877444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      268  (0.0149478); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.20s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 1300.16
//
Query:       KHJ34127.1  [L=169]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       346  (0.0192983); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1359.71
//
Query:       KHJ34128.1  [L=494]
Description: hypothetical protein EV44_g0880 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.17   10.7   0.0       0.25   10.1   0.0    1.2  1  YukC      WXG100 protein secretion system (Wss), protein YukC


Domain annotation for each model (and alignments):
>> YukC  WXG100 protein secretion system (Wss), protein YukC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   1.4e-05      0.25     179     236 ..     112     169 ..     104     190 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 1.4e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        YukC 179 eknlakvpkkkykifkyllvglivllillliyliYllffkqPkqealieaneaylkkd 236
                 ek+  +v+k  ++ + yl++g+i+l++++   ++ l+  + P++e++i+  ++++ + 
  KHJ34128.1 112 EKKSVLVRKPFWERHLYLILGIIALFAIFFSIIGVLISRLRPHKENIIDITQNFTRNS 169
                 67888999999*999999999999999999999999999***************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       670  (0.0373696); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.20s 00:00:00.74 Elapsed: 00:00:00.35
# Mc/sec: 4192.32
//
Query:       KHJ34129.1  [L=1014]
Description: putative glycoside hydrolase family 63 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.8e-10   39.6   7.3    3.7e-07   29.3   0.1    4.0  4  Glyco_hydro_63  Glycosyl hydrolase family 63 C-terminal domai
  ------ inclusion threshold ------
      0.026   14.7   0.1      0.095   13.0   0.1    2.0  1  TTSSLRR         Type III secretion system leucine rich repeat
       0.14   11.9   0.0       0.31   10.8   0.0    1.5  1  VLPT            Variable length PCR target protein (VLPT)


Domain annotation for each model (and alignments):
>> Glyco_hydro_63  Glycosyl hydrolase family 63 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1      0.39   2.3e+03      95     115 ..     452     472 ..     441     477 .. 0.81
   2 ?   -0.7   0.0     0.074   4.4e+02     253     289 ..     581     615 ..     577     648 .. 0.75
   3 !   29.3   0.1   6.3e-11   3.7e-07     361     429 ..     725     812 ..     718     821 .. 0.72
   4 !   11.0   0.1   2.2e-05      0.13     452     489 ..     865     902 ..     856     904 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.39
                     HHHHHHHHHHHHHH-HHHHHH CS
  Glyco_hydro_63  95 lWDeGFhqllilkwdvdltle 115
                      WD  Fh +++   d d++ +
      KHJ34129.1 452 AWDSAFHCIPLAMIDPDFAKK 472
                     6************99998765 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.074
                     HHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHH CS
  Glyco_hydro_63 253 vDlrsWvalaakslksiaellgeeeekekyaktekel 289
                      D   W+a+ + s+ +ia  l ++ +   y+++++++
      KHJ34129.1 581 ADSTGWMAFYSLSMLNIALELAKHRRI--YEDIASKF 615
                     58889************9888776654..55555444 PP

  == domain 3  score: 29.3 bits;  conditional E-value: 6.3e-11
                     T-THHHHHHHHHH-TTTTEETTEEBSB-T...TSTTTT-......TT-S...............SSS-B-HHHHHHHHHHHHHH---S CS
  Glyco_hydro_63 361 dsekleklldlikdpeelwsdyGlrslsk...ksslygkrnt.ehdenY...............WrgpiWininylilsalkhyskve 429
                     + ++lek+l+ + d++e+ sd+G+rslsk   k+++ ++ n  e + +Y               WrgpiW+ +n+l++++l++++   
      KHJ34129.1 725 SKDRLEKILARMLDQDEFLSDFGIRSLSKfhqKNPYSMNVNGqEFKISYvpgdsdtglfggnsnWRGPIWLCVNFLLVESLQRFYIFY 812
                     4579************************844355666666642433333333333333344444******************998655 PP

  == domain 4  score: 11.0 bits;  conditional E-value: 2.2e-05
                     HHHHHHTSS--SEE-TTT--EESSSS-TTGGGGHHHHH CS
  Glyco_hydro_63 452 vkqyketGfvweqYddktGkgkgakeFtGWtslvvlim 489
                      ++++++ +++e +d  +G+g ga++  GWt l+  i+
      KHJ34129.1 865 DENWRDNVWFYEFFDGDSGRGLGASHQCGWTGLIARII 902
                     5799******************************9886 PP

>> TTSSLRR  Type III secretion system leucine rich repeat protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   1.6e-05     0.095      13      45 ..     378     411 ..     371     417 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.6e-05
                 XXXXXXXXXXXXXX....--HHHHHHHHHHHHHT CS
     TTSSLRR  13 pnieithdlsspaeqga.qteeeYlaaWseWern 45 
                 p  e  + ++ +a +g   t+++Y+ +Ws+W++ 
  KHJ34129.1 378 PVSEDLRNIQRQAFAGMmWTKQHYHFIWSQWANG 411
                 5566666777777777789************985 PP

>> VLPT  Variable length PCR target protein (VLPT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   5.2e-05      0.31       8      25 ..     959     976 ..     957     977 .. 0.93

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 5.2e-05
        VLPT   8 SDLHeSffVELfdPfKEe 25 
                 SD  eS +V LfdP +Ee
  KHJ34129.1 959 SDWDESRSVDLFDPEREE 976
                 9999***********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1014 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       557  (0.031067); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.43
# Mc/sec: 7039.10
//
Query:       KHJ34130.1  [L=555]
Description: putative s-adenosylmethionine-dependent methyltransferase-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.01   15.6   2.3       0.01   15.6   2.3    2.4  2  BBP1_C    Spindle pole body component BBP1, C-terminal


Domain annotation for each model (and alignments):
>> BBP1_C  Spindle pole body component BBP1, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.3      0.25   4.4e+03     120     136 ..     152     168 ..     125     179 .. 0.48
   2 ?   15.6   2.3   5.8e-07      0.01      37     108 ..     200     268 ..     185     299 .. 0.62

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.25
      BBP1_C 120 lrnkeleekreidkikY 136
                 l  +  +e+r+++ ++Y
  KHJ34130.1 152 LSLQLQQEARDNQSASY 168
                 22222222222222222 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 5.8e-07
      BBP1_C  37 qeesykkkYeelraeLinelkqskklydnYykLysKYqeLkkis.kesldlqskianlekqlvdqaiekdrei 108
                 q esy    +e r++      q + + dnY +L +KY+++k +  +++    +++++l++ l +q +++ r  
  KHJ34130.1 200 QKESYNGPQNEQRQNQAVLPTQERDINDNYKELVTKYKKVKGLYfEKT----AQVEQLQNTLANQRLSQSRTS 268
                 45555555555555555556799******************9985333....333334444444444443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       946  (0.0527637); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 4154.28
//
Query:       KHJ34131.1  [L=849]
Description: putative reticulocyte-binding protein 2 like protein a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (849 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      4614  (0.257348); expected 358.6 (0.02)
Passed bias filter:                     1244  (0.0693848); expected 358.6 (0.02)
Passed Vit filter:                       767  (0.0427799); expected 17.9 (0.001)
Passed Fwd filter:                       223  (0.0124379); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 4.50u 0.42s 00:00:04.92 Elapsed: 00:00:00.82
# Mc/sec: 3134.27
//
Query:       KHJ34132.1  [L=1188]
Description: putative pyruvate carboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      7e-80  267.5   0.4    1.1e-79  266.9   0.4    1.3  1  CPSase_L_D2      Carbamoyl-phosphate synthase L chain, ATP bi
    5.3e-69  231.9   0.0      1e-68  231.0   0.0    1.5  1  PYC_OADA         Conserved carboxylase domain
    5.4e-33  113.8   0.0    1.2e-32  112.8   0.0    1.6  1  Biotin_carb_N    Biotin carboxylase, N-terminal domain
    1.2e-30  105.8   0.0    3.2e-30  104.4   0.0    1.8  1  Biotin_carb_C    Biotin carboxylase C-terminal domain
    1.1e-22   80.8   0.0    2.5e-22   79.7   0.0    1.6  1  HMGL-like        HMGL-like
    1.3e-19   69.8   2.8    3.4e-19   68.5   2.8    1.7  1  Biotin_lipoyl    Biotin-requiring enzyme
    3.5e-11   42.8   0.4    1.5e-06   28.0   0.1    2.6  2  Biotin_lipoyl_2  Biotin-lipoyl like
    5.2e-11   42.5   0.0    1.3e-10   41.1   0.0    1.6  1  Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
    2.4e-06   27.2   0.0    5.1e-06   26.2   0.0    1.4  1  ATP-grasp        ATP-grasp domain
     0.0011   18.2   0.2      0.014   14.6   0.1    2.2  2  HlyD_D23         Barrel-sandwich domain of CusB or HlyD membr
     0.0012   18.9   0.0     0.0028   17.7   0.0    1.6  1  ATP-grasp_3      ATP-grasp domain
     0.0013   18.4   0.1     0.0073   15.9   0.1    2.1  1  RimK             RimK-like ATP-grasp domain
     0.0017   19.1   0.3       0.99   10.1   0.0    3.0  3  HlyD_3           HlyD family secretion protein
  ------ inclusion threshold ------
      0.018   15.0   0.1      0.048   13.6   0.1    1.7  1  DUF2118          Uncharacterized protein conserved in archaea
      0.018   14.5   0.2      0.034   13.6   0.2    1.4  1  NQRA             Na(+)-translocating NADH-quinone reductase s
      0.022   14.4   0.1      0.068   12.8   0.0    1.9  2  ATP-grasp_4      ATP-grasp domain
      0.026   14.5   1.3       0.22   11.5   1.1    2.4  2  RnfC_N           RnfC Barrel sandwich hybrid domain
       0.09   12.7   0.9       0.41   10.5   0.5    2.3  2  GCV_H            Glycine cleavage H-protein
       0.23   11.7   1.0        3.3    8.0   0.2    3.1  3  Peptidase_M23    Peptidase family M23
        0.3   10.8   1.6          1    9.1   0.0    2.6  3  PYNP_C           Pyrimidine nucleoside phosphorylase C-termin


Domain annotation for each model (and alignments):
>> CPSase_L_D2  Carbamoyl-phosphate synthase L chain, ATP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  266.9   0.4   1.2e-82   1.1e-79       1     210 [.     151     359 ..     151     360 .. 0.99

  Alignments for each domain:
  == domain 1  score: 266.9 bits;  conditional E-value: 1.2e-82
                  SHHHHHHHHHHTT-BBSSEECSSBSSHHHHHHHHHHH-SSEEEEETTCCTTTTEEEESSHHHHHHHHHHHHHHHHHHHSTS-EEEEE--SSSEEEEEE CS
  CPSase_L_D2   1 DkesakealkkinvpvvpssaapvetleealaiakeigyPviikaafglGGkGmrvarneeelaelvkkalaeakaafgnkqvlvekslkgpkeiEve 98 
                  Dk+sa++++ k++v vvp+++ +v t +e+ ++++++g+Pviikaafg+GG+Gmrv+r+ e+l+e++++a +eakaafgn +v++e++l++pk+iEv+
   KHJ34132.1 151 DKVSARAIAIKAGVSVVPGTDDAVGTFDEVKKFTDKHGFPVIIKAAFGGGGRGMRVVRSIETLKESFERAASEAKAAFGNGTVFLERFLDKPKHIEVQ 248
                  9************************************************************************************************* PP

                  EEEETTS-EEEEEEEEECCECTCCCCEEEES-SS--HHHHHHHHHHHHHHHHHHT-EEEEEEEEEEETTTTEEEEEEEESS--CCHHHHHHHHS--HH CS
  CPSase_L_D2  99 vlrDakgnvitvcerenslqlrtqkvievAPsqtLtdeerqalreaavkvvrevgvvgagtveflldpkskeyyviEvNtRlsvesalaekaTGldlv 196
                  +l D++gn++++ er++s+q+r+qkv+e AP++ L +e r+ + ++avk+++ v++++agt efl+d+ +++yy+iE+N+R++ve++++e++TG+d++
   KHJ34132.1 249 LLGDNHGNIVHLYERDCSVQRRHQKVVELAPAKDLPQEVRDNILNDAVKIAKFVNYRNAGTAEFLVDQ-QNRYYFIEINPRIQVEHTITEEITGIDII 345
                  *******************************************************************8.9**************************** PP

                  HHHHHHHTT--GCG CS
  CPSase_L_D2 197 keaakialgekLee 210
                  +++++ia+g++L +
   KHJ34132.1 346 AAQIQIAAGATLAQ 359
                  ***********986 PP

>> PYC_OADA  Conserved carboxylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.0   0.0   1.1e-71     1e-68       1     197 [.     867    1065 ..     867    1066 .. 0.99

  Alignments for each domain:
  == domain 1  score: 231.0 bits;  conditional E-value: 1.1e-71
                  HHCCT--CCHHHHHHHHHHHTT-GGGHHHHHHHHHHHHHHTT----STTHHHHHHHHHHHHHHH........TS.TTSS--HHHHHHHTTSS---SS CS
    PYC_OADA    1 VykheiPGGqltnlkeqakeqglldkfeevlkeyaevnkllGdivkVTPsSkvvgdlAvfnvlnklteedvleegrykdipdsvvdllkGelGkppg 97  
                  Vy+heiPGGqltn+ +qa ++gl+ ++ e +k+y+++n+llGdivkVTP+SkvvgdlA+f+v+n+l+ edv +++ ++d+p sv d+++G +G+p+g
  KHJ34132.1  867 VYEHEIPGGQLTNMMFQASQLGLGAQWAETKKAYEHANELLGDIVKVTPTSKVVGDLAQFMVSNQLSVEDVQQKAGELDFPGSVLDFFEGLMGQPYG 963 
                  9************************************************************************************************ PP

                  ---HHHHHHHHT.-----S-GGGG---.-HHHHHHHTTTTSS..SHHHHHHHHHSHHHHHHHHHHHHHHHHHH..CTTTS......-SEEEEEETTE CS
    PYC_OADA   98 gfpeelvkkvlkgeepitsrpadslepedleklrkeleekak..teedvlsyalypkvaekflkfreeygdvsvlptkvffeglkvgeevevevegg 192 
                  gfpe+l++++l+g++++++rp+  lep dl+k+++++ +k++  t+ dv sya+ypkv+e++ +f ++ygd+sv+pt+ f++  +vgee++ve+e+g
  KHJ34132.1  964 GFPEPLRTNALRGRRKLDKRPGLYLEPLDLAKIKQDIYNKYGsvTDCDVASYAMYPKVFEDYRNFVNKYGDLSVVPTRYFLSRPEVGEEFHVELEKG 1060
                  *****************************************767***************************************************** PP

                  EEE.E CS
    PYC_OADA  193 kyliv 197 
                  k+li 
  KHJ34132.1 1061 KVLIL 1065
                  *9975 PP

>> Biotin_carb_N  Biotin carboxylase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.8   0.0   1.3e-35   1.2e-32       2     110 .]      39     146 ..      38     146 .. 0.92

  Alignments for each domain:
  == domain 1  score: 112.8 bits;  conditional E-value: 1.3e-35
                    --EEEE---HHHHHHHHHHHHHTT-EEEEEEEGGGTTSHHHHHSSEEEEEE...SSTTCCGGG-HHHHHHHHHHTT-SEEE--SSTTTT-HHHHHH CS
  Biotin_carb_N   2 ikkvlianrGeiAvriiravrelgietvavyseedanslhvreadeavelg...pasasesYlniekivkaakesgadavhpGyGflsEnaefaea 94 
                    +kk+l+anrGei +r    ++el+++tvavys ed+  +h ++adea+++g   + s+  +Yl  ++i+k+a ++g++ +hpGyGflsEnaefa++
     KHJ34132.1  39 LKKILVANRGEIPIR----AHELSLQTVAVYSYEDRLGMHRQKADEAYMIGshgQYSPIGAYLAGDEIIKIAVQHGVQMIHPGYGFLSENAEFARN 130
                    69************9....589****************************94222235589*********************************** PP

                    HHHTT-EESSS-HHHH CS
  Biotin_carb_N  95 veeagivfiGPsaeal 110
                    ve+ag+ f+GPs++++
     KHJ34132.1 131 VEKAGLLFVGPSPKVI 146
                    *************986 PP

>> Biotin_carb_C  Biotin carboxylase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.4   0.0   3.5e-33   3.2e-30       1     107 [.     375     482 ..     375     483 .. 0.98

  Alignments for each domain:
  == domain 1  score: 104.4 bits;  conditional E-value: 3.5e-33
                    EEEEESEETTTTTEE--CE-SEEE---STTEEEEE---.TT-EE-TTS-SEEEEEEEEESSHHHHHHHHHHHHHT-EEESS-BSHHHHHHHHH-HH CS
  Biotin_carb_C   1 eaRinaEdpeknflpssGkvtelelpegpgvRvdsgve.egsevspyyDsllaKlivhgetreealarlrraLaelrieGvktnieflrailedee 95 
                    ++Ri++Edp+++f+p+sGk++ ++  +g+gvR+d g    g+ +sp+yDs+l K  + g+t e a +++ raL e+ri+Gvktni+fl+++l +++
     KHJ34132.1 375 QCRITTEDPANGFSPDSGKIEVYRSSGGNGVRLDGGNGfVGAIISPHYDSMLVKCTCLGSTYEIARRKMLRALVEFRIRGVKTNIPFLASLLTHPT 470
                    79********************************998769******************************************************** PP

                    HHHT---TTTCC CS
  Biotin_carb_C  96 fakgeldtkfle 107
                    f++ge+ t+f++
     KHJ34132.1 471 FISGECWTTFID 482
                    **********98 PP

>> HMGL-like  HMGL-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.7   0.0   2.8e-25   2.5e-22       4     261 ..     574     843 ..     572     845 .. 0.89

  Alignments for each domain:
  == domain 1  score: 79.7 bits;  conditional E-value: 2.8e-25
                 EEE-TTTHHHHTS.SS---HHHHHHHHHHHHHH..T-SEE--........TSGGGT.THHHHHHHS---TT-B...........--EE-SSHHHHHHHH CS
   HMGL-like   4 ivdttLRDGeqal.kaalsveeklaiakaLdea..gvdeiEv........gfpaaseddfevvraiakavkka......r...ilalvrarekdikaav 82 
                 ++dtt RD++q+l ++++++ + l+i k+ ++a   + ++E+         ++++ ed+++++r+  k+v++       r    +a+  + ++ i  + 
  KHJ34132.1 574 LMDTTWRDAHQSLlATRVRTIDLLNIGKETSHAysNLFSLECwggatfdvAMRFLYEDPWDRLRKMRKVVPNIpfqmllRganGVAYSSLPDNAIYHFC 672
                 68**********999************998887335668899999999889*******************998666665155689999999******** PP

                 H....TT-SEEEEEEES-HHHHHHHHSSTHHHHHHHHHHHHHHHHHTT-E......TTT.-BTTTBS--HHHHHHHHHHHHHHT-SEEEEEETTS---H CS
   HMGL-like  83 ealkgagakrvhvfiatselhlkaklkkdreevakkaeeavkaarslgkd......vel.sledasrtdleflaevveaaeeaGatriniaDtvGvltP 174
                 e++k+ g+++++vf+a ++              +++ e  +ka++++g        ++  +l+  ++ +l + +++ve+++++   ++ i+D+ Gvl+P
  KHJ34132.1 673 EQAKKHGVDIFRVFDALND--------------IDQLEVGIKAVQKAGGVvegticYSGdFLNPKKKYNLSYYMNLVEKLVALKIHILGIKDMAGVLKP 757
                 *******************..............77777777778777777333322222245566788999**************************** PP

                 HHHHHHHHHHHHHS-.GGGEEEEEB-TTS-HHHHHHHHHHTT--EEEEBTTS--SSBBB-BHHHHHHHHHHTT-B----HHHHHHHH CS
   HMGL-like 175 neaaelisalkervkdkvilsvHcHndlGlAvantlaAveaGadrvdgtvnGlGeraGnaaleelvaalealgvdtgldlqklrsia 261
                 ++a  l+ +++e+++  ++++vH+H+   ++va ++a ++aGad+vd++  +l++ +  +++ ++   le++ + +gld++k+r+i 
  KHJ34132.1 758 KAATLLVGKIREKYP-DIPIHVHTHDSAATGVASMVACANAGADVVDTATDSLSGMTSQPSVGAVLSSLEGTDLYPGLDVHKVRAID 843
                 ***************.*******************************************************************9986 PP

>> Biotin_lipoyl  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.5   2.8   3.8e-22   3.4e-19       2      73 .]    1117    1183 ..    1116    1183 .. 0.97

  Alignments for each domain:
  == domain 1  score: 68.5 bits;  conditional E-value: 3.8e-22
                     EEEESSSEEEEEE.ECSESSSTTCEE-TTSEEEEEECTTEEEEEEBSSSEEEEEESSTTTEEE-TTCEEEEE CS
  Biotin_lipoyl    2 eiksPmiGesveegvvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdtvevgdllaki 73  
                     ++ +Pm G+++e     + vk+G++Vk+g+++a+++amKmem i+ap+aG v+ ilvkeGd+v  +dl+++i
     KHJ34132.1 1117 QVGAPMSGVVIE-----IRVKEGSEVKKGDPIAVLSAMKMEMVISAPHAGEVAHILVKEGDSVAGSDLICRI 1183
                     7999********.....****************************************************987 PP

>> Biotin_lipoyl_2  Biotin-lipoyl like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.1   1.6e-09   1.5e-06       3      34 ..    1116    1147 ..    1114    1154 .. 0.90
   2 !   12.4   0.0   0.00012      0.11       5      33 ..    1155    1183 ..    1152    1187 .. 0.86

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 1.6e-09
  Biotin_lipoyl_2    3 vsIaapvsGrVaqlnVkdGqrVkaGdvLaelD 34  
                        ++ ap sG+V +++Vk+G +Vk+Gd +a+l 
       KHJ34132.1 1116 SQVGAPMSGVVIEIRVKEGSEVKKGDPIAVLS 1147
                       688899***********************997 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.00012
  Biotin_lipoyl_2    5 IaapvsGrVaqlnVkdGqrVkaGdvLael 33  
                       I+ap +G Va ++Vk+G+ V   d++ ++
       KHJ34132.1 1155 ISAPHAGEVAHILVKEGDSVAGSDLICRI 1183
                       99******************877777665 PP

>> Dala_Dala_lig_C  D-ala D-ala ligase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.0   1.5e-13   1.3e-10      27     174 ..     179     327 ..     165     328 .. 0.87

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 1.5e-13
                      HHHHHHHHC-SSEEEEESSSSTTTTEEEESSGGGHHHHHHHHHTT......-SCEEEEE--.ESEEEEEEEEETSSCEEEEEEEEE-SSSSS-H CS
  Dala_Dala_lig_C  27 llekveeelgypvfVKpareGSSvGvskveseeelkeaieeafky......dekvlvEeai.egreievavlgneklevsevgeivvkkgfydy 113
                       ++k +++ g+pv++K+a  G   G+  v+s e lke +e+a++       + +v+ E+++ + + iev +lg+++ ++ ++ e+  +    + 
       KHJ34132.1 179 EVKKFTDKHGFPVIIKAAFGGGGRGMRVVRSIETLKESFERAASEakaafgNGTVFLERFLdKPKHIEVQLLGDNHGNIVHLYERDCSV--QRR 270
                      57888999*****************************99998876222222568*******999*********9999999999887764..344 PP

                      HHHHC.TT-EEESS----HHHHHHHHHHHHHHHHHTT--SEEEEEEEEETTTEEEEEEEES CS
  Dala_Dala_lig_C 114 eakysddkaqlevpaklekeveekiqelalkaykaldlrGlaRvDfflteegeivlnEvNt 174
                      ++k     ++l    +l++ev+++i + a+k+ k+++ r  +   f+++++++ ++ E+N+
       KHJ34132.1 271 HQKV----VELAPAKDLPQEVRDNILNDAVKIAKFVNYRNAGTAEFLVDQQNRYYFIEINP 327
                      5554....68888899********************************************6 PP

>> ATP-grasp  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   5.7e-09   5.1e-06      15     160 ..     175     329 ..     168     333 .. 0.91

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 5.7e-09
                 CCHHHHHHHHHHH-SCEEEEESSS-CTTTTEEEECTCCGHHCHHHHC........GTTCEEEEE----SEEEEEEEEEETTC-.EEE--EEEEEEETTE CS
   ATP-grasp  15 eskeeleeaaeelglpvvvKarrlgydGkGqsvvrseedleqaleal........keekvivEefvpfekElsvlvvrsaeGe.tafypvvetvqedgi 104
                  + +e+++++++ g+pv++K +  g  G+G  vvrs e+l++ +e +        ++++v +E f +  k + v    + +G+ ++ y+    vq++  
  KHJ34132.1 175 GTFDEVKKFTDKHGFPVIIK-AAFGGGGRGMRVVRSIETLKESFERAaseakaafGNGTVFLERFLDKPKHIEVQLLGDNHGNiVHLYERDCSVQRRHQ 272
                 567899**************.788889************99999888899999999************99999999999***96789999999999999 PP

                 EEEEEECEE.-SCHHHHHHHHHHHHHHHHHTSSEEEEEEEEEETTCTEEEEEEESS- CS
   ATP-grasp 105 lrlsvapae.vsekaqkkaeeiakkiveeLggvGvfavElFvledgellvnElapRp 160
                  ++ +apa+ ++++   ++ + a ki++ +++    + E+ v ++++ ++ E+ pR 
  KHJ34132.1 273 KVVELAPAKdLPQEVRDNILNDAVKIAKFVNYRNAGTAEFLVDQQNRYYFIEINPRI 329
                 999999985389999*******************999**99998888********95 PP

>> HlyD_D23  Barrel-sandwich domain of CusB or HlyD membrane-fusion
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.1   1.6e-05     0.014     102     140 ..    1109    1147 ..    1078    1154 .. 0.77
   2 ?    1.3   0.0      0.19   1.7e+02     106     139 ..    1150    1183 ..    1146    1186 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.6e-05
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    HlyD_D23  102 tgkvqktvtvkapisGvVteknvreGqyvqpgdtlftia 140 
                  + ++  + +v ap+sGvV+e +v eG+ v++gd+++ ++
  KHJ34132.1 1109 KADPGDSSQVGAPMSGVVIEIRVKEGSEVKKGDPIAVLS 1147
                  345567788999999999999999999999999987665 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.19
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    HlyD_D23  106 qktvtvkapisGvVteknvreGqyvqpgdtlfti 139 
                  + ++ ++ap +G V +  v eG+ v  +d + +i
  KHJ34132.1 1150 KMEMVISAPHAGEVAHILVKEGDSVAGSDLICRI 1183
                  5678899*****************9999888887 PP

>> ATP-grasp_3  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   3.1e-06    0.0028      31     159 ..     188     330 ..     166     332 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 3.1e-06
                  SSSEEEEESS-------B--SS--TTE...................EEEE--.-SEEEEEEEEE.SSSEEEEEEEEE.EEET....TEEEEEEES--- CS
  ATP-grasp_3  31 ekklvvKprdGaggesvrvveekeeaeaaieeve............lvqefi.eGkplSvsllsdgekvlvlavnrq.liekaekefvyaGnvtpiet 114
                    ++++K + G+gg ++rvv+  e++++++e  +             + +f+ + k++ v+ll+d++ + v    r   ++++++++v      + ++
   KHJ34132.1 188 GFPVIIKAAFGGGGRGMRVVRSIETLKESFERAAseakaafgngtvFLERFLdKPKHIEVQLLGDNHGNIVHLYERDcSVQRRHQKVVELAPAKDLPQ 285
                  5589**********************999999889999*******877888835799*******9988776666555156666677888888888888 PP

                  -HHHHHHHHHHHHHTTSTT--EEEEEEEEESS..SEEEEEEESS-- CS
  ATP-grasp_3 115 elkeevvelaeevvekleglaGyvGvDlvlkd.eepyviEvNPRlt 159
                  e ++++ + a ++ + + + +     ++++ + +  y+iE+NPR++
   KHJ34132.1 286 EVRDNILNDAVKIAKFV-NYRNAGTAEFLVDQqNRYYFIEINPRIQ 330
                  88999999999988888.777777778888776999********98 PP

>> RimK  RimK-like ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.1   8.1e-06    0.0073      24     182 ..     174     346 ..     150     352 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 8.1e-06
                 ESS-S-HHHHHHTT-.-SSEEEEE-TTTT--EEEEE-SHHHHHHHHHH.........GGG--EEEEE--SS-SEEEEEEEET.TEEEEEEEEE--SS.S CS
        RimK  24 ardeedaekliekiklrfPvvvKsvegsqGikvvlakkeqklkqvlea.........lkeailvqeyieeaenediRvlvvd.devvaalrrvskeG.d 111
                 +   ++++k+ +k   +fPv++K  +g  G ++ + +  + lk+ +e           + ++++  ++++ +  ++ +l  + +++v  ++r +     
  KHJ34132.1 174 VGTFDEVKKFTDKH--GFPVIIKAAFGGGGRGMRVVRSIETLKESFERaaseakaafGNGTVFLERFLDKPKHIEVQLLGDNhGNIVHLYERDCSVQrR 270
                 44556777888887..7***********9999999999999999888656664445445555999*****99999999976535788888887554202 PP

                 ----TTTT.-EEEE----HHHHHHHHHHHHHCT-SEEEEE..EEEETTEEEEEEEESS--SHH..HHHHHT--HHH CS
        RimK 112 FRsnlhrG.gvaeklqlseeekelAikaakamelvvaGvD..llrakrgllvlEvnsspglek..iektlgidiak 182
                     +++  ++  + ++ ++  + A+k+ak ++   aG    l+++++ ++++E+n   ++e+   e  +gidi +
  KHJ34132.1 271 HQKVVELApAKDLPQEVRDNILNDAVKIAKFVNYRNAGTAefLVDQQNRYYFIEINPRIQVEHtiTEEITGIDIIA 346
                 222222221333355666666677**************988999*************9998862257788999743 PP

>> HlyD_3  HlyD family secretion protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       9.5   8.5e+03      53      89 ..    1049    1086 ..    1043    1107 .. 0.64
   2 !   10.1   0.0    0.0011      0.99       2      31 ..    1118    1147 ..    1117    1153 .. 0.90
   3 ?    5.6   0.0     0.028        25       2      33 ..    1155    1186 ..    1154    1188 .] 0.92

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 9.5
      HlyD_3   53 kgqkvtlkldqgsdytlkgkierisptvdaktg...aykv 89  
                  +g + +++l++g  ++l  k+  ++p +d++++    y++
  KHJ34132.1 1049 VGEEFHVELEKG--KVLILKLLAVGPLSDTTGQrdvFYEM 1086
                  677888888755..59999999999966554442224443 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.0011
      HlyD_3    2 lrApvdGvvvelnveegevvqagdelleii 31  
                  + Ap +Gvv e+ v+eg+ v +gd+++ + 
  KHJ34132.1 1118 VGAPMSGVVIEIRVKEGSEVKKGDPIAVLS 1147
                  569***********************9875 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.028
      HlyD_3    2 lrApvdGvvvelnveegevvqagdelleiipp 33  
                  + Ap +G+v+ + v+eg+ v+  d + +i+ p
  KHJ34132.1 1155 ISAPHAGEVAHILVKEGDSVAGSDLICRIVKP 1186
                  88**********************99999876 PP

>> DUF2118  Uncharacterized protein conserved in archaea (DUF2118)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   5.3e-05     0.048      87     134 ..    1121    1167 ..    1112    1174 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 5.3e-05
     DUF2118   87 pvegvkvtlivdvGdrveegdtlaavttrkgevrylrapvegvVvfik 134 
                  p++gv++ + v++G +v++gd++a + + k e+  + ap  g V+ i 
  KHJ34132.1 1121 PMSGVVIEIRVKEGSEVKKGDPIAVLSAMKMEM-VISAPHAGEVAHIL 1167
                  899*****************************7.78999999998876 PP

>> NQRA  Na(+)-translocating NADH-quinone reductase subunit A (NQRA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.2   3.8e-05     0.034      29      79 ..    1115    1166 ..    1099    1172 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.8e-05
        NQRA   29 vallgedyvglkpklkvkegdkVkkGqvlfe.dKknpgvlftspasGevvei 79  
                   + +g++  g+  ++ vkeg +VkkG++++  +  + ++++ +p +Gev++i
  KHJ34132.1 1115 SSQVGAPMSGVVIEIRVKEGSEVKKGDPIAVlSAMKMEMVISAPHAGEVAHI 1166
                  556778889999****************9872556679***********998 PP

>> ATP-grasp_4  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   7.5e-05     0.068       2     152 ..     188     329 ..     187     337 .. 0.85
   2 ?   -2.9   0.0       4.9   4.4e+03      69      90 ..    1081    1102 ..    1079    1107 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 7.5e-05
  ATP-grasp_4   2 slPvviKPsvgffSlGVykinneeewkaavaaieeeleqakeeykeevveeesflvEeyieG.eEfavdayfdeeGepvilnilkkefaseedvsdrl 98 
                   +Pv+iK + g + +G++++++ e +k+ +++  +e   ak+        ++++ +E +++  + + v ++ d++G+  i+++++++ + ++  ++++
   KHJ34132.1 188 GFPVIIKAAFGGGGRGMRVVRSIETLKESFERAASE---AKAA-----FGNGTVFLERFLDKpKHIEVQLLGDNHGN--IVHLYERDCSVQRRHQKVV 275
                  58**************************99998866...4444.....44667789999986267899999999986..789999**99999999999 PP

  ATP-grasp_4  99 yvts.akvieetlealeellkevnallglknfpvHiElrvsedgkiipiEvnplr 152
                   + + +++ +e  +++ +   ++++ ++ +n  + +E+ v+++++ + iE+np+ 
   KHJ34132.1 276 ELAPaKDLPQEVRDNILNDAVKIAKFVNYRNAGT-AEFLVDQQNRYYFIEINPRI 329
                  8777256999999***999999**9****99876.9*****************75 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 4.9
  ATP-grasp_4   69 dayfdeeGepvilnilkkefas 90  
                   d++++ +Ge  ++ i +++ a 
   KHJ34132.1 1081 DVFYEMNGEVRVVTIDDQNAAV 1102
                   89**********9998877665 PP

>> RnfC_N  RnfC Barrel sandwich hybrid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.1      0.51   4.6e+02      66      81 ..    1115    1130 ..    1107    1132 .. 0.84
   2 ?   11.5   1.1   0.00025      0.22      43      81 ..    1128    1167 ..    1118    1186 .. 0.66

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.51
      RnfC_N   66 sapvhasvsGtVkaie 81  
                  s++v a++sG V++i+
  KHJ34132.1 1115 SSQVGAPMSGVVIEIR 1130
                  78999********996 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00025
      RnfC_N   43 kplvkvgdkVlkGqkiaeaeg.fvsapvhasvsGtVkaie 81  
                  ++ vk+g +V+kG+ ia  ++  + + + a+ +G+V +i 
  KHJ34132.1 1128 EIRVKEGSEVKKGDPIAVLSAmKMEMVISAPHAGEVAHIL 1167
                  5667777777777777777664456777777777777763 PP

>> GCV_H  Glycine cleavage H-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1      0.27   2.4e+02      25      74 ..    1082    1129 ..    1076    1132 .. 0.66
   2 ?   10.5   0.5   0.00046      0.41      25      73 ..    1118    1165 ..    1115    1173 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.27
                  HHHHHH-SEEEEE---TT-EE-TT-EEEEEEESS-EEEEE-SSSEEEEEE CS
       GCV_H   25 faqeelgdvvfvelpevgtkvkkgeslaavEsvKaasevyapvsGevvev 74  
                  +  e+ g+v +v++ +++++v++  s a  + +   s+v ap+sG v+e+
  KHJ34132.1 1082 VFYEMNGEVRVVTIDDQNAAVENT-SRAKADPG-DSSQVGAPMSGVVIEI 1129
                  444556666666666666666643.44555555.4699*********997 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00046
                  HHHHHH-SEEEEE---TT-EE-TT-EEEEEEESS-EEEEE-SSSEEEEE CS
       GCV_H   25 faqeelgdvvfvelpevgtkvkkgeslaavEsvKaasevyapvsGevve 73  
                  +++ + g v+ ++++e g +vkkg+++a++ + K+   + ap  Gev  
  KHJ34132.1 1118 VGAPMSGVVIEIRVKE-GSEVKKGDPIAVLSAMKMEMVISAPHAGEVAH 1165
                  5666778899999986.9****************************976 PP

>> Peptidase_M23  Peptidase family M23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       7.2   6.5e+03      59      77 ..     347     365 ..     333     386 .. 0.73
   2 ?   -1.1   0.0       2.5   2.3e+03      18      48 ..     388     416 ..     380     428 .. 0.74
   3 ?    8.0   0.2    0.0037       3.3      54      76 ..    1128    1150 ..    1086    1175 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 7.2
                    TTEEE-TTCEEEEEBSTSS CS
  Peptidase_M23  59 egqkVkaGqvIGtvgstgr 77 
                    ++ +++aG+++++ g t++
     KHJ34132.1 347 AQIQIAAGATLAQLGLTQD 365
                    5568999999999996664 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 2.5
                    ESSSEEEEEEEEETTTEEEEEEEECTCEEEE CS
  Peptidase_M23  18 AaadGtVvfagkkegyGnvviidhgdgystl 48 
                    ++ +G++   +   + Gn v++d g+g++  
     KHJ34132.1 388 SPDSGKIEVYRS--SGGNGVRLDGGNGFVGA 416
                    566777744433..57**********98754 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0037
                     EESS-TTEEE-TTCEEEEEBSTS CS
  Peptidase_M23   54 kisvkegqkVkaGqvIGtvgstg 76  
                     +i+vkeg +Vk+G++I+   + +
     KHJ34132.1 1128 EIRVKEGSEVKKGDPIAVLSAMK 1150
                     3569************9877555 PP

>> PYNP_C  Pyrimidine nucleoside phosphorylase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.3       2.2   1.9e+03      29      45 ..     694     710 ..     690     712 .. 0.83
   2 ?    9.1   0.0    0.0011         1      34      57 ..    1127    1150 ..    1120    1162 .. 0.84
   3 ?   -3.3   0.0       8.1   7.2e+03      37      53 ..    1167    1183 ..    1165    1183 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 2.2
                 -TT-EEEES--TT-EEB CS
      PYNP_C  29 dlavGielhkklGdkVk 45 
                 +l+vGi+   k G  V+
  KHJ34132.1 694 QLEVGIKAVQKAGGVVE 710
                 679********999987 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0011
                  EEES--TT-EEBTTSEEEEEEESS CS
      PYNP_C   34 ielhkklGdkVkkGeplatiYank 57  
                  ie+ +k G +VkkG+p+a++ a k
  KHJ34132.1 1127 IEIRVKEGSEVKKGDPIAVLSAMK 1150
                  88999*************986655 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 8.1
                  S--TT-EEBTTSEEEEE CS
      PYNP_C   37 hkklGdkVkkGeplati 53  
                   +k Gd+V   + +++i
  KHJ34132.1 1167 LVKEGDSVAGSDLICRI 1183
                  57899***999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.77u 0.25s 00:00:01.02 Elapsed: 00:00:00.41
# Mc/sec: 8607.17
//
Query:       KHJ34133.1  [L=240]
Description: hypothetical protein EV44_g6261 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-05   25.3   1.4    1.9e-05   25.3   1.4    3.4  4  SUZ            SUZ domain
  ------ inclusion threshold ------
       0.26   11.1   0.6       0.52   10.2   0.6    1.4  1  Cys_rich_CPCC  Cysteine-rich CPCC


Domain annotation for each model (and alignments):
>> SUZ  SUZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.48   4.3e+03      36      51 ..      31      46 ..      15      53 .. 0.59
   2 !   25.3   1.4   2.1e-09   1.9e-05      35      55 ..     113     145 ..      73     147 .. 0.71
   3 ?   -0.1   0.1      0.18   1.6e+03      21      42 ..     152     173 ..     144     175 .. 0.45
   4 ?   -0.7   0.4      0.29   2.6e+03       9      23 ..     200     214 ..     194     228 .. 0.68

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.48
         SUZ 36 ktleEREaeYaeARaR 51
                ++  ER+a+  eA ++
  KHJ34133.1 31 LSKAERQAQHIEANKK 46
                6777888765555554 PP

  == domain 2  score: 25.3 bits;  conditional E-value: 2.1e-09
         SUZ  35 s............ktleEREaeYaeARaRIFgs 55 
                              k leE++++Y +ARaRI+g 
  KHJ34133.1 113 DsispeeqrlkalKELEEKQKRYDAARARILGA 145
                 0233333344478******************96 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.18
         SUZ  21 rgssgasssesssss.........ktleERE 42 
                 +g ++         +         k+++ RE
  KHJ34133.1 152 SGDTT---------KymktnseipKSIQARE 173
                 11111.........12333344558888888 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.29
         SUZ   9 kRpsssssssssrgs 23 
                 +R +  +s+sssr++
  KHJ34133.1 200 RRKNTEFSRSSSREE 214
                 555555554444443 PP

>> Cys_rich_CPCC  Cysteine-rich CPCC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.6   5.8e-05      0.52      26      65 ..      11      49 ..       9      56 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 5.8e-05
  Cys_rich_CPCC 26 WedDlvqlkapdleggaNkvsLreArknfkkfGaceeeli 65
                   W+dD+  ++ ++++ + N+++L++A ++ +++ a ++ + 
     KHJ34133.1 11 WDDDWE-VQVDKTSKDVNEITLSKAERQAQHIEANKKIWK 49
                   999976.789999**************9999988776654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       958  (0.053433); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 1678.86
//
Query:       KHJ34134.1  [L=432]
Description: putative anthranilate phosphoribosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.1e-65  219.6   0.0    2.8e-64  217.2   0.0    2.0  1  Glycos_transf_3  Glycosyl transferase family, a/b domain
    9.8e-11   41.4   0.0    1.9e-10   40.4   0.0    1.5  1  Glycos_trans_3N  Glycosyl transferase family, helical bundle 


Domain annotation for each model (and alignments):
>> Glycos_transf_3  Glycosyl transferase family, a/b domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.2   0.0   3.1e-68   2.8e-64       4     253 .]     115     417 ..     112     417 .. 0.94

  Alignments for each domain:
  == domain 1  score: 217.2 bits;  conditional E-value: 3.1e-68
                      BEEEEESS-SSSTHHHHHHHHHHHHHHTT-BEEEEE-STCTTCS-HHHHHCTS...T--S.T--HHHHHHHHHHHSEEEEEHHSSSSHHHHHHH CS
  Glycos_transf_3   4 lvDivgTGGdgantfNiStaaaivvAaaGvkvakhgnrsvssksGsaDvLeal...gvnl.eltpeeveklleevgvgflfapeyhkamkhvap 93 
                      l DivgTGGd +ntfN+St+++i+++a+ +++akhgnr+++sksGsaD+L+++     +l +++p+++ ++ e+++ +flfa+++h++m++vap
       KHJ34134.1 115 LCDIVGTGGDSHNTFNVSTTSSILASAL-LQIAKHGNRASTSKSGSADILQSMqpvAPDLdNVSPKNICQIYEKTNYAFLFASNFHPGMRYVAP 207
                      78*********************99988.9**********************9633447777899***************************** PP

                      HHHHHTT.-SSHHHCHHHHHT....SEEEEHHHHHHHHTCHSEEEEEEEESTTSSCCS.TSHHHHHHHHHHHHHHHHTT............... CS
  Glycos_transf_3  94 vrrelgirTvfnlLGPLinpar..vkkqllgvyskelaeklaevlkelgveralvvhg.dGldevsllakttvaelkdg............... 169
                      +r+elg rT+fn+LGPL+np++   ++++lgv+s e+ + +ae+lk  gv++al+v+g + lde+s ++kt+ ++l+d+               
       KHJ34134.1 208 IRKELGWRTIFNILGPLTNPVEqlLEARVLGVASREIGSLYAEALKIQGVKKALIVCGeENLDEISCAGKTYCWKLNDSssihpeestdsfssd 301
                      ********************6523799*******************************999****************8779************* PP

                      ......EEEEEEEEEGSSTSSSEEESHHH.HSSHHHHHHHHTTHHTSCHHHHH..HHHHHHHHHHHHHHTTSSSS................... CS
  Glycos_transf_3 170 ......eiteytlepedfglkraeleale.ggepkenaeilkavlegkksaak..rdlvllnagaalvlagkads................... 235
                            +i++++lep+dfgl ++ l ++  g+epkena+il ++l+++    +  ++ vl+n++a++v++g +++                   
       KHJ34134.1 302 ngddliKIESFSLEPADFGLPSHPLVQVSpGKEPKENANILLKILQNQLAYDDpiLHFVLMNTSALFVISGICEDdtsnmgtlddgviitergp 395
                      ***************************9757789*************97665567*******************99****************** PP

                      ....HHHHHHHHHHHHHTSHHH CS
  Glycos_transf_3 236 ....lkegvakaeevidsGkAl 253
                          +kegv++a+ +i+sG+Al
       KHJ34134.1 396 gggrWKEGVRRARWAIESGEAL 417
                      *******************995 PP

>> Glycos_trans_3N  Glycosyl transferase family, helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   0.0   2.2e-14   1.9e-10      12      62 ..      33      85 ..      20      86 .. 0.92

  Alignments for each domain:
  == domain 1  score: 40.4 bits;  conditional E-value: 2.2e-14
                     ---HHHHHHHHHHHHTTSS-HHHHHHHHHHHHHH-..--HHHHHHHHHHHHHH CS
  Glycos_trans_3N 12 eLtaeeirfaihgilkgevtdaqiaAfLmAlrlkG..etaeEiaalaeAmres 62
                     + taeei+++i+ +++++++ +q++A+L++l+++G  + ++ +a++a  mr++
       KHJ34134.1 33 NVTAEEIAQVISYLFTNQLSLVQAGALLTCLHFTGweLRPDVLAKCALSMRKA 85
                     78*************************************************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       282  (0.0157287); expected 358.6 (0.02)
Passed bias filter:                      273  (0.0152267); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 3154.25
//
Query:       KHJ34135.1  [L=581]
Description: putative iron only hydrogenase large subunit domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.6e-52  177.1   0.0    9.4e-52  176.1   0.0    1.5  1  Fe_hyd_lg_C  Iron only hydrogenase large subunit, C-terminal 
     0.0053   16.9   0.1       0.85    9.7   0.0    2.3  2  Amidase_3    N-acetylmuramoyl-L-alanine amidase
  ------ inclusion threshold ------
       0.19   12.0   0.0       0.56   10.5   0.0    1.7  2  Rx_N         Rx N-terminal domain


Domain annotation for each model (and alignments):
>> Fe_hyd_lg_C  Iron only hydrogenase large subunit, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.1   0.0   1.6e-55   9.4e-52       1     243 []     116     466 ..     116     466 .. 0.87

  Alignments for each domain:
  == domain 1  score: 176.1 bits;  conditional E-value: 1.6e-55
                  -EEEEEE-HHHHHHGGGGGT--T-S-HHHHHHHHHH.TT..........-SEEEETHHHHHHHHHHHHHHHHHHH............HH.TS-SSEE- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx..........xxxxxxxxxxxxxxxxxxxxxxxxxx............xx.xxxxxxxx RF
  Fe_hyd_lg_C   1 kkvvvqvAPavrvalgeefglsvaattgklvaalrk.lG..........fdkVfdtafgadltimeeasellerl............ee.eeklpmit 74 
                  k+ v++v+P++r++l+ +fg+s++++  ++ + l+   G          f+ V+dt+++++ +++   +e+l+ l            +e ++k+p++t
   KHJ34135.1 116 KIYVASVSPQSRASLAAAFGVSQREAGYMIEQLLSGsQGiknravyrnfFQWVIDTNVARNACLVLGVDEVLNSLqgreersasedsKEpQAKMPLLT 213
                  5689******************987777776666543442233333333778***********************99988877765422799****** PP

                  ---HHHHHHHHHH-GGGGGGB--B--HHHHHHHHHHTHHHHH.....GGEEEEEEES-SSHHHHHTSTT-BBTB.........BSS-EEEEHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxx RF
  Fe_hyd_lg_C  75 ScCPgwvkyvekkypellpnlssvkSPqqilgaliKkylaek.....ekivvVsimPCtaKklEaareefksag.........rdvDavlTtrElael 158
                  S+CPgw++y+ek++p +lp+ls+ kSPq i+g+++K+ l +      ++i +V+imPC++KklEa+ree+++++         rdvD v+TtrEl+ l
   KHJ34135.1 214 SSCPGWICYAEKTHPYILPHLSKLKSPQAITGTILKTTLSKIfdispQRIWHVAIMPCYDKKLEASREELTDHSwagceskgiRDVDSVMTTRELLLL 311
                  **************************************9998****************************994456688899**************** PP

                  HHHTT--GGGS-------TTSSSSSTSS-.................................................TTEEEEE.EEE-TSEE.EEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................................................xxxxxxx.xxxxxxxx.xxx RF
  Fe_hyd_lg_C 159 lkeagidlakleeeeldnplgessgagki.................................................egvkeae.velegktl.kva 205
                   + +++d+akl+  +++++     +   +                                                  +v e + ++ e++ l k+a
   KHJ34135.1 312 ADVRRVDFAKLPRYPVQRIPFPDPK---LesflfpsdknllsnrsyefgpsggylyyilnyfvsqnkgskihmtrgrnADVLEYSvISCENEILiKAA 406
                  ***********99998886333333...333579999999*********************************9999988888886677777777*** PP

                  EEESHHHHHHHHHHH......................HTTSS--SEEEEESSTTSGGG-T CS
                  xxxxxxxxxxxxxxx......................xxxxxxxxxxxxxxxxxxxxxxx RF
  Fe_hyd_lg_C 206 vvnGlknikkllekl......................kageakydfiEvmaCpgGCigGg 243
                    +G++ni++l+++l                           ++ +iEvmaCpgGC +Gg
   KHJ34135.1 407 RYYGFRNIQNLVRRLkppnqsripgvkpkgivkkslsMPSGTDFTYIEVMACPGGCTNGG 466
                  *******************************99888744555788**************8 PP

>> Amidase_3  N-acetylmuramoyl-L-alanine amidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0   0.00014      0.85      54     132 ..      81     168 ..      70     196 .. 0.72
   2 !    4.7   0.0     0.005        30      69      99 ..     473     499 ..     469     551 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00014
   Amidase_3  54 vslkeranianksradlfvsiHadsaanss.asGvevfy.........leknekkaeskrlaksiqkelkkklglknrgvkeannlyvl 132
                 vsl+  +++ n+ + + +++iH ++ + ++  +G ++++         +  +    ++++   +i + l+  +g knr v  +  ++++
  KHJ34135.1  81 VSLQSHTEVLNELDSAPALRIHPNGTSLENlEHGGKIYVasvspqsraSLAAAFGVSQREAGYMIEQLLSGSQGIKNRAVYRNF-FQWV 168
                 69999*******************99888867*******777776664333333333344444444446666666676666665.4444 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.005
   Amidase_3  69 dlfvsiHadsaanss.asGvevfyleknekka 99 
                 d ++siH++s ans+  s+ e +      k +
  KHJ34135.1 473 DPVLSIHHNSEANSRpLSQKEWIS-----KVD 499
                 5689*******9999446655554.....333 PP

>> Rx_N  Rx N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.7     1e+04      13      32 ..     173     192 ..     169     195 .. 0.82
   2 ?   10.5   0.0   9.3e-05      0.56      53      82 ..     490     519 ..     477     554 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.7
        Rx_N  13 laeeakllkgvkeeleklkd 32 
                 +a +a+l+ gv+e l++l+ 
  KHJ34135.1 173 VARNACLVLGVDEVLNSLQG 192
                 56778999999999999985 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 9.3e-05
        Rx_N  53 avkeWlkelrdlaydaeDvlDefetealrr 82 
                 + keW++++ ++ ++ +D+lDe + + +++
  KHJ34135.1 490 SQKEWISKVDEAYFSGDDILDETQNNNQHE 519
                 679*******************88766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (581 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.23s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 4351.55
//
Query:       KHJ34136.1  [L=366]
Description: putative eukaryotic translation initiation factor 3 subunit 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-08   34.0   0.0      3e-07   30.4   0.0    2.3  1  JAB       JAB1/Mov34/MPN/PAD-1 ubiquitin protease
  ------ inclusion threshold ------
       0.11   13.2   0.1        0.2   12.3   0.1    1.4  1  MDMPI_N   Mycothiol maleylpyruvate isomerase N-terminal domai
       0.12   12.3   0.1       0.24   11.3   0.1    1.5  1  DUF5126   Domain of unknown function (DUF5126)


Domain annotation for each model (and alignments):
>> JAB  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   5.1e-11     3e-07       3     114 ..      11     134 ..       9     138 .. 0.85

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 5.1e-11
                 SCEEEEEHHHHHHHHHHHHHHHHHTS--EEEEEEEESSSEEEEEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHC.................TT CS
         JAB   3 vqavhleslvllkildhalrtekeeeevmGlliGelnddttveitnvfalpfeetekdvdavsldqeylekksellkklr.................gr 84 
                 +++v++++lv++ki++  ++   +     G l+G  ++  ++e+tn+f +p+ +++ + d +s +++  ++    + + +                  +
  KHJ34136.1  11 LRTVQVDALVVMKIIKACSSAFPS--VSTGSLVGMDKNG-VLEVTNCFPFPVIDSTLS-DPHSNEHQVATNLAAAAPRSKgnisyqnemirclrevnVD 105
                 589*********************..99******99999.***********9998887.5555556644555555544449999999999999999666 PP

                 SEEEEEEEESSSS-SS--HHHHHHHHHHHH CS
         JAB  85 ervvGWYhshpditvwlsevdvrtqalyqr 114
                  + vGWY+s      +l+++ ++ q+lyq+
  KHJ34136.1 106 ANNVGWYTSANMG-GFLNSNLIENQFLYQK 134
                 *******999887.9*************98 PP

>> MDMPI_N  Mycothiol maleylpyruvate isomerase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   3.3e-05       0.2      65     132 ..     269     337 ..     257     344 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.3e-05
     MDMPI_N  65 alvtaadaeavdlaaslapeal..laafraavtrlaaalaalppdaiadrlgipggprslgeflrtrlvE 132
                 +l+ ++   +++la+++a  a   +++ ++ + r++++la lp+d++++ + ip++p +l  +l +r  +
  KHJ34136.1 269 ELNNFQ-YYQRQLAREQAKVAAwkTKRTAENASRALQKLAPLPEDEWERIFKIPTEPSRLESMLNARQID 337
                 444444.4555555555544442256788999***************************99999988765 PP

>> DUF5126  Domain of unknown function (DUF5126)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   3.9e-05      0.24      27     100 ..     240     313 ..     237     316 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 3.9e-05
     DUF5126  27 NptkanlaivvlvkdsekkewkevdtlYtsakegnlsvrgleaverkfgvvvrDrwgnvsdtllatltPlyEee 100
                 N ++ +l+i  + ++s  + + +v+t+Yt+ ++ ++  r l+ +++k +   + r        l++l Pl E e
  KHJ34136.1 240 NIDSLELSIDPYLEKSCDQVLDSVETHYTELNNFQYYQRQLAREQAKVAAWKTKRTAENASRALQKLAPLPEDE 313
                 56677899999999999999************************999988777766666666667788877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (366 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       607  (0.0338558); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2841.72
//
Query:       KHJ34137.1  [L=720]
Description: putative multispanning membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   2.7e-196  653.3   0.5   3.3e-196  653.0   0.5    1.1  1  EMP70      Endomembrane protein 70
  ------ inclusion threshold ------
       0.16   11.2   1.3       0.18   11.1   0.2    1.6  2  Tmpp129    Putative transmembrane protein precursor
        0.2   11.7   0.1        0.2   11.7   0.1    2.7  3  Bee_toxin  Honey bee toxin
       0.39   10.8   9.9        1.4    9.0   3.0    3.1  3  NS3_envE   Non-structural protein NS3/Small envelope protein 
        5.8    6.4   7.2         14    5.1   7.2    1.6  1  Sec62      Translocation protein Sec62


Domain annotation for each model (and alignments):
>> EMP70  Endomembrane protein 70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  653.0   0.5  9.3e-200  3.3e-196       1     519 []      56     677 ..      56     677 .. 0.92

  Alignments for each domain:
  == domain 1  score: 653.0 bits;  conditional E-value: 9.3e-200
       EMP70   1 pydYydllpfCkpe..eekk.......kese..sLgevLrGdrienspyelkfgkdeeckvlCtkkltkeelkklkelIkngYvvnwlvDnLPvatsfv 88 
                 +y+Yy+l+++C+p+  +  +        +    +LgevLrGdri++s++el +g+d eck lC++++t+ ++k++k+lIk+gY v+w+vDnLP+atsfv
  KHJ34137.1  56 QYAYYSLPFVCPPSgiN--HagssllsGQPIplNLGEVLRGDRIQQSDIELFIGRDFECKFLCNRTVTAPDIKRAKKLIKEGYSVEWIVDNLPGATSFV 152
                 69***********9542..23557887343468**************************************************************9999 PP

       EMP70  89 s........aaGfplGfvdkee..ekekyylnnhldfviryhkakeee....kkrivgfevepksvkde.ee.eeCp....keae.lel...eee.... 159
                 +        ++Gf+lG++d  +   k++yylnnhl++v++y+ka++++    kk i+gfev++ksv +  ++ + Cp    ++ + +el   +++    
  KHJ34137.1 153 TvdksrkyyVPGFKLGYIDLAPvsGKKTYYLNNHLTIVLKYRKASGRDgdkgKKIIIGFEVYTKSVGNVsRDrDGCPidleNNITsFELefvQNKteat 251
                 99999999999********87567899****************99988999989*************98654689**9985333446666563335677 PP

       EMP70 160 ...........k........keeeteipftYsVkwresedvewasRwdlyle.svedskihwfsiinslvivlllslivavillrtlrkdiarynee.. 236
                            +        +e++++ip+tYsV+wre++++ew++Rwd+y+  + + sk+hw++iinsl+i  lls+iva+il+rt+r di++ +e   
  KHJ34137.1 252 tdylhssyqppEtesdasydSENTLDIPYTYSVYWREDDEIEWSHRWDMYFVnQEAGSKVHWLAIINSLIISGLLSGIVALILARTIRADINTGKEFll 350
                 777777665550566778887899***************************745455***********************************8877699 PP

       EMP70 237 ........................................eeee.aqeesgWKlvhgdVfrpPknsllLsvlvGsGvqlllmalvtlllallgflspsn 294
                                                         ++ee ++e+sgWKl+ gdVfr+P++++lL+ lvGsG+ql++ma ++lll+ lg+l+ps 
  KHJ34137.1 351 endkfrakrkiknglsptfkveksgllgqvedegndadisSDEEpLEEQSGWKLLPGDVFRVPSHASLLAHLVGSGTQLFFMANGLLLLSSLGVLNPSL 449
                 *******************************999988887555678899************************************************** PP

       EMP70 295 rgslltvalllyvllgliaGYvsarlyktfggekwkkntlltalllpgllflvffllnlilwakessgalpfgtlvlllllwflisvPlvliGsllgfk 393
                 rg+++++++ l+v++g+++GY+s+rlyktf+g +wkkn+l+tall+pgll+++ff+lnl++wa++ss+alpfgtlv ++llw++i++Plv++Gs++g++
  KHJ34137.1 450 RGGFVSAGVGLFVFAGVFSGYFSGRLYKTFSGLDWKKNALVTALLFPGLLLAFFFILNLFVWAQASSTALPFGTLVGIILLWLCIQLPLVYAGSWYGYT 548
                 *******************************99****************************************************************** PP

       EMP70 394 kk.aiehpvrtnqiprqipkqpwylkpllsvllgGilpFgaifielyfilsslwlek..iYylfgfLflvfllliittaevtilltYfqLcaedyrWwW 489
                 ++ a++hp++ +  pr ip+q+wy+k+  s++l+G++pF++if+el f+++slw e+   YylfgfLf+v ++liit++evti+ +Y++Lc+edyrWwW
  KHJ34137.1 549 HSgAWKHPTKSTLNPRPIPPQNWYTKNPHSIILSGFIPFAVIFVELAFVFQSLWHERsgSYYLFGFLFIVSIILIITIIEVTIVSVYVKLCSEDYRWWW 647
                 99555***************************************************9889*************************************** PP

       EMP70 490 rSflvggssalYvflysiyYyftklkisgf 519
                 +Sf vgg+s+++vf y+ +Yyft++k++gf
  KHJ34137.1 648 HSFAVGGGSSIWVFGYCAWYYFTQIKVEGF 677
                 ***************************997 PP

>> Tmpp129  Putative transmembrane protein precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   4.9e-05      0.18      43     115 ..     492     565 ..     452     580 .. 0.74
   2 ?   -2.6   0.1       0.7   2.5e+03      56      93 ..     592     629 ..     572     652 .. 0.45

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4.9e-05
     Tmpp129  43 tllvhsllplgYf.lgllllskvkaeelleletlwkvllllsvllailalvlvvywsskkwsnhPiakelkkla 115
                  ll+  ll++++f l l + +++++++l++ + +  +ll+l+++l+++++   + +++++  +hP+  +l+  +
  KHJ34137.1 492 ALLFPGLLLAFFFiLNLFVWAQASSTALPFGTLVGIILLWLCIQLPLVYAGSWYGYTHSGAWKHPTKSTLNPRP 565
                 233444444444414444445588999**************************9999999999***99998766 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.7
     Tmpp129  56 lgllllskvkaeelleletlwkvllllsvllailalvl 93 
                 + l ++ ++ ++e +    l+  l+++s++l+i+++ +
  KHJ34137.1 592 VELAFVFQSLWHERSGSYYLFGFLFIVSIILIITIIEV 629
                 23333333334444444444445555555333332221 PP

>> Bee_toxin  Honey bee toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   5.7e-05       0.2       2      43 ..       7      47 ..       6      52 .. 0.86
   2 ?   -3.1   0.1       2.3   8.2e+03      32      40 ..     116     125 ..     111     130 .. 0.73
   3 ?   -3.4   3.5       2.9   1.1e+04       9      18 ..     614     624 ..     610     636 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5.7e-05
   Bee_toxin  2 ismlrCiflFlsviLitsYFVtPtmsikCNCkriviPhlCak 43
                i +lr  flF s+iL    F  P  sik   +   +P l  k
  KHJ34137.1  7 IGLLRS-FLFCSIILCSQAFYVPGFSIKSYENNEAVPLLVNK 47
                778888.********************998888888877665 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.3
   Bee_toxin  32 Ckrivi.Phl 40 
                 C+r+v+ P +
  KHJ34137.1 116 CNRTVTaPDI 125
                 9999997876 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 2.9
   Bee_toxin   9 flF.lsviLit 18 
                 flF +s+iLi 
  KHJ34137.1 614 FLFiVSIILII 624
                 56637999985 PP

>> NS3_envE  Non-structural protein NS3/Small envelope protein E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0    0.0083        30      40      61 ..     110     132 ..     105     146 .. 0.76
   2 ?   -2.9   0.5       2.1   7.5e+03      11      22 ..     524     535 ..     522     539 .. 0.66
   3 ?    9.0   3.0    0.0004       1.4      15      39 ..     614     639 ..     608     643 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0083
    NS3_envE  40 lvlcglcntlvlsP.akqvYkiY 61 
                 + +  lcn++v +P +k++ k+ 
  KHJ34137.1 110 FECKFLCNRTVTAPdIKRAKKLI 132
                 68999*********955544443 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.1
    NS3_envE  11 lvvqvlfilvvl 22 
                 lv+ +l++l + 
  KHJ34137.1 524 LVGIILLWLCIQ 535
                 677777777654 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.0004
    NS3_envE  15 vlfilvvlivvlliviallkv.ikLC 39 
                  lfi+ +++++++i ++++ v +kLC
  KHJ34137.1 614 FLFIVSIILIITIIEVTIVSVyVKLC 639
                 689****************9768*** PP

>> Sec62  Translocation protein Sec62
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   7.2    0.0039        14     112     176 ..     585     646 ..     570     649 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0039
       Sec62 112 igllvvvailavvlFPLWPaelrkgvyYLSiaalgllglilalaivRlilflivllvtkgklhlW 176
                 i ++v+++ la+v+  LW    r g+yYL +++l ++ +il+++i+ + +  + + ++++ ++ W
  KHJ34137.1 585 IPFAVIFVELAFVFQSLWHE--RSGSYYL-FGFLFIVSIILIITIIEVTIVSVYVKLCSEDYRWW 646
                 456788888999999***65..9******.89******************999999999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (720 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       771  (0.043003); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.42
# Mc/sec: 5183.24
//
Query:       KHJ34138.1  [L=279]
Description: hypothetical protein EV44_g4495 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2060  (0.114898); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2199.29
//
Query:       KHJ34139.1  [L=517]
Description: putative u4 u6 small nuclear ribonucleoprotein prp4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.8e-40  136.1  20.3    1.1e-08   35.5   1.3    7.9  7  WD40         WD domain, G-beta repeat
    4.2e-15   55.8   0.1       0.15   12.3   0.0    5.6  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    4.9e-15   54.8   3.3    9.8e-15   53.8   3.3    1.5  1  PRP4         pre-mRNA processing factor 4 (PRP4) like
  ------ inclusion threshold ------
      0.067   12.5   0.0        2.1    7.6   0.0    2.4  2  Nbas_N       Neuroblastoma-amplified sequence, N terminal
      0.099   11.6   0.0         30    3.4   0.0    3.6  5  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0      0.03   1.1e+02      17      35 ..     200     219 ..     165     220 .. 0.73
   2 !   20.6   0.2   1.6e-07   0.00058       3      38 .]     228     275 ..     226     275 .. 0.89
   3 !   34.1   0.1     9e-12   3.2e-08       3      38 .]     281     317 ..     280     317 .. 0.94
   4 !   20.0   0.0   2.5e-07   0.00089       8      38 .]     328     359 ..     320     359 .. 0.88
   5 !   23.5   0.6     2e-08   7.2e-05       2      38 .]     364     401 ..     363     401 .. 0.94
   6 ?    5.4   0.1      0.01        36      19      37 ..     447     465 ..     406     466 .. 0.69
   7 !   35.5   1.3   3.2e-12   1.1e-08       2      37 ..     471     507 ..     470     507 .. 0.94

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.03
                 E.EETTSSEEEEEETTSEEE CS
        WD40  17 a.fspdgawlasGsdDgtvr 35 
                   fsp+g  +a+G + g ++
  KHJ34139.1 200 TrFSPNGEIIAAGNWGGGIK 219
                 269*********98877776 PP

  == domain 2  score: 20.6 bits;  conditional E-value: 1.6e-07
                 EEEEEESS.SSEEEEEEETTSSE...........EEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgaw...........lasGsdDgtvriWd 38 
                  ++tl+GH + v ++++ pd ++           l+sG+ Dg v++W+
  KHJ34139.1 228 EIKTLRGHtDRVGGISWYPDATLasatvtedsvnLSSGGADGLVHLWS 275
                 5899****666************99999999988899999*******5 PP

  == domain 3  score: 34.1 bits;  conditional E-value: 9e-12
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +l tltGH + v+ + f+p+g++las+s+D t r+Wd
  KHJ34139.1 281 PLSTLTGHsQRVCRVEFHPSGKYLASASEDTTWRLWD 317
                 789*****666*************************9 PP

  == domain 4  score: 20.0 bits;  conditional E-value: 2.5e-07
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +GH  +v +laf+ dg++las+++D   riWd
  KHJ34139.1 328 EGHsRGVFALAFNTDGSLLASAGMDSIGRIWD 359
                 59*555**************9999*******9 PP

  == domain 5  score: 23.5 bits;  conditional E-value: 2e-08
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++ +l+GH  ++++l++  dg+ ++sGs Dg +r Wd
  KHJ34139.1 364 RTVMILEGHiRPIYALDWGADGHRVLSGSGDGWIRCWD 401
                 67899****999****************99*******9 PP

  == domain 6  score: 5.4 bits;  conditional E-value: 0.01
                 ETTSSEEEEEETTSEEEEE CS
        WD40  19 spdgawlasGsdDgtvriW 37 
                  ++g++++sG+ D++v i+
  KHJ34139.1 447 KKSGTFFISGGFDKSVNIF 465
                 56788999**99****997 PP

  == domain 7  score: 35.5 bits;  conditional E-value: 3.2e-12
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +++++l+GH ++v+s++f +d +w++sG++D+t+++W
  KHJ34139.1 471 SLVQSLRGHtGNVHSIDFTKDARWIVSGGYDRTIKLW 507
                 6899*****777************************* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.3   0.0   4.6e-05      0.16      23      89 ..     180     244 ..     171     247 .. 0.86
   2 !   12.3   0.0   4.3e-05      0.15      35      71 ..     286     322 ..     272     328 .. 0.86
   3 !   11.9   0.0   5.9e-05      0.21      35      75 ..     328     368 ..     322     374 .. 0.89
   4 !    8.6   0.0   0.00065       2.3      40      89 ..     375     423 ..     370     425 .. 0.87
   5 ?    3.3   0.0     0.029     1e+02      49      90 ..     449     489 ..     445     514 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 4.6e-05
  ANAPC4_WD40  23 RlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  Rl   ++++  + + ++ v+  +++p+g+++a +   g ++ll++ s + +++l+ +++ +v  ++W
   KHJ34139.1 180 RLHSIELYGS-QMAGERPVSMTRFSPNGEIIAAGNWGGGIKLLSVPSMTEIKTLRGHTD-RVGGISW 244
                  5555556665.7788999************************************99988.5888888 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 4.3e-05
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgk 71 
                  ++++++v  ++++p+gk La a +d++ rl d+++++
   KHJ34139.1 286 TGHSQRVCRVEFHPSGKYLASASEDTTWRLWDVNTTT 322
                  56789999*************************9875 PP

  == domain 3  score: 11.9 bits;  conditional E-value: 5.9e-05
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhs 75 
                  +++++ v +La++ dg+lLa a  d+  r+ d  +g++v  
   KHJ34139.1 328 EGHSRGVFALAFNTDGSLLASAGMDSIGRIWDLRTGRTVMI 368
                  56778899****************************99965 PP

  == domain 4  score: 8.6 bits;  conditional E-value: 0.00065
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                   + +L W  dg+    +  dg +r  d+ + +    + ++++  v+ l W
   KHJ34139.1 375 PIYALDWGADGHRVLSGSGDGWIRCWDVRKVQPSGGIGAHKS-VVSDLRW 423
                  6889*************************9999888888887.5888888 PP

  == domain 5  score: 3.3 bits;  conditional E-value: 0.029
  ANAPC4_WD40  49 dgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  +g+++  +  d +v+++++ +  +v+sl+ ++ + v +++++
   KHJ34139.1 449 SGTFFISGGFDKSVNIFSVDDWSLVQSLRGHTGN-VHSIDFT 489
                  6667777777777777777777777777766663.6666655 PP

>> PRP4  pre-mRNA processing factor 4 (PRP4) like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.8   3.3   2.7e-18   9.8e-15       1      29 []      67      95 ..      67      95 .. 0.98

  Alignments for each domain:
  == domain 1  score: 53.8 bits;  conditional E-value: 2.7e-18
        PRP4  1 VrrrLRelGEPitLFGEthadRreRLrkL 29
                Vr+rLRe+GEP tLFGE++ dRr+RLr+L
  KHJ34139.1 67 VRARLREMGEPMTLFGEGPGDRRDRLRQL 95
                9**************************98 PP

>> Nbas_N  Neuroblastoma-amplified sequence, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0   0.00058       2.1     210     263 ..     175     228 ..     163     240 .. 0.86
   2 ?    2.3   0.0     0.024        86     227     259 ..     329     361 ..     298     377 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00058
      Nbas_N 210 krgllkllslklysrkaeekdgvfkmslspdgtllavihfsgklsiwdipslkq 263
                 k    +l s++ly  +   +  v    +sp+g ++a+  + g + + ++ps+ +
  KHJ34139.1 175 KAIKERLHSIELYGSQMAGERPVSMTRFSPNGEIIAAGNWGGGIKLLSVPSMTE 228
                 44445899*****999999999*999*************************975 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.024
      Nbas_N 227 eekdgvfkmslspdgtllavihfsgklsiwdip 259
                     gvf +++  dg+lla   +     iwd+ 
  KHJ34139.1 329 GHSRGVFALAFNTDGSLLASAGMDSIGRIWDLR 361
                 55679**************99999888899875 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.17   6.3e+02     188     216 ..     195     223 ..     156     234 .. 0.77
   2 ?    2.2   0.0      0.02        71     169     215 ..     229     275 ..     217     281 .. 0.85
   3 ?    3.4   0.0    0.0083        30     185     219 ..     286     321 ..     277     324 .. 0.85
   4 ?   -0.2   0.0      0.11   3.8e+02     187     215 ..     330     359 ..     320     365 .. 0.80
   5 ?   -2.5   0.0      0.55     2e+03     193     217 ..     379     403 ..     358     407 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.17
    Ge1_WD40 188 sliveaafspdGtalatasedGevkffqv 216
                   ++ + fsp+G  +a+    G +k+  v
  KHJ34139.1 195 RPVSMTRFSPNGEIIAAGNWGGGIKLLSV 223
                 3488899**********999999998766 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.02
    Ge1_WD40 169 sgelsveeieegllkieehsliveaafspdGtalatasedGevkffq 215
                 ++ l+ ++ + g +  + ++++ +a+++ d   l+   +dG+v+++ 
  KHJ34139.1 229 IKTLRGHTDRVGGISWYPDATLASATVTEDSVNLSSGGADGLVHLWS 275
                 5566677777799999999*************************996 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.0083
    Ge1_WD40 185 eehs.liveaafspdGtalatasedGevkffqvyle 219
                 + hs  +    f p G  la ased + +++ v+ +
  KHJ34139.1 286 TGHSqRVCRVEFHPSGKYLASASEDTTWRLWDVNTT 321
                 56665789999********************99865 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.11
    Ge1_WD40 187 hs.liveaafspdGtalatasedGevkffq 215
                 hs  +   af +dG  la a +d + + + 
  KHJ34139.1 330 HSrGVFALAFNTDGSLLASAGMDSIGRIWD 359
                 554577889**************9888775 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 0.55
    Ge1_WD40 193 aafspdGtalatasedGevkffqvy 217
                   + +dG  +   s dG ++ + v 
  KHJ34139.1 379 LDWGADGHRVLSGSGDGWIRCWDVR 403
                 556799999999********99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 3918.70
//
Query:       KHJ34140.1  [L=440]
Description: putative succinyl- ligase beta-chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.5e-73  245.9   0.2    4.3e-73  245.2   0.2    1.4  1  ATP-grasp_2  ATP-grasp domain
    5.6e-24   84.7   0.2    1.5e-23   83.3   0.2    1.8  1  Ligase_CoA   CoA-ligase
    2.7e-05   23.8   0.1    5.1e-05   22.8   0.1    1.5  1  ATP-grasp_5  ATP-grasp domain
  ------ inclusion threshold ------
       0.03   14.1   0.9       0.18   11.6   0.1    2.5  2  GARS_A       Phosphoribosylglycinamide synthetase, ATP-grasp 


Domain annotation for each model (and alignments):
>> ATP-grasp_2  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  245.2   0.2   9.6e-77   4.3e-73       2     201 ..      32     238 ..      31     239 .. 0.99

  Alignments for each domain:
  == domain 1  score: 245.2 bits;  conditional E-value: 9.6e-77
                  E-HHHHHHHHHCTT----SEEEESSHHHHHHHHHHHTSSSEEEEE--SSSTCCCT.......TCEEEESSHHHHHHHHHCCTTSEEE-TTS-TT-EEE CS
  ATP-grasp_2   2 lhEyqakeilakygvkvpegevaesaeeaeeaakklgekelvvKaQvlaGGRGKa.......gGvklvkskeeakeaakellgkelvtkqtgkeGkkv 92 
                  +hEy + ++l+ky+v vp g va++  eae +akk+g+++lv+KaQvlaGGRGK+        Gv++ +s++eak +a++++g++l+tkqtg++G+++
   KHJ34140.1  32 IHEYLSADLLRKYDVGVPAGSVAKTGAEAEVVAKKIGGDDLVIKAQVLAGGRGKGvfdngfqKGVRVLYSQSEAKPIAEKMIGHNLITKQTGAKGRPC 129
                  8************************************************************99*********************************** PP

                  --EEEEE---ECEEEEEEEEEETTTTEEEEEEESSTTS-HHHHHHH-GGGEEEEEEBTTTB--HHHHHHHHHHCT--CHHHHHHHHHHHHHHHHHHHT CS
  ATP-grasp_2  93 ekvlveealdikkElYlsivlDraskkvvviaSseGGvdiEevaakkPekiikvaidpakglkeeqareiakklglekelvkkaakiikklyklfvel 190
                  + v+++e+   ++E+Yl+i++Dras +++++ Ss+GG+diE+va+++Pe+i+k+ i+ ++g++++ areiak+lg++++++ +a+ +i++lyklfve+
   KHJ34140.1 130 NSVYICERKFSRREFYLAILMDRASASPIIVSSSQGGMDIETVAKESPEAIKKTRINLHEGVTDDIAREIAKDLGFSERCIGDAMIVIQRLYKLFVEK 227
                  ************************************************************************************************** PP

                  TEEEEEEEEEE CS
  ATP-grasp_2 191 datlvEiNPLv 201
                  dat+vEiNPL+
   KHJ34140.1 228 DATQVEINPLT 238
                  *********97 PP

>> Ligase_CoA  CoA-ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.3   0.2   3.4e-27   1.5e-23       1     152 [.     298     417 ..     298     418 .. 0.97

  Alignments for each domain:
  == domain 1  score: 83.3 bits;  conditional E-value: 3.4e-27
                 EESSHHHHHHHHHHHHHT..............T--BSEEEE-TSS--..........HHHHHHHHHHHHS-TT-SEEEEEEEESSSEHHHHHHHHHHHH CS
  Ligase_CoA   1 lvnGGtLayeamdlikealgdvasnkklknvlgseqheiidlGddaftkGrpHPmiDptkriealkklaadpevkvilldivlGygahedpaaellkai 99 
                 +vnG++La+++md+ik++              g+++++++d+G+ a+          p+++++a+  +++dp+v +i+++i++G+++++ +a++l++ +
  KHJ34140.1 298 VVNGAGLAMATMDIIKLN--------------GGNPANFLDVGGNAT----------PKAIYNAFSLITSDPKVTAIFVNIFGGIVRCDAIAEGLISIV 372
                 69****************..............***************..........9***************************************** PP

                 HHTT...--S-EEEEEECTTHH.....HHHHHHHTTTSSEEE-SSHHHHHHHH CS
  Ligase_CoA 100 keakaegrelpvvarvaGteadpqelseqakaleeagveiasskaqalraaka 152
                 k+++     +p+++r+ Gt+ +      ++++++e+g++i s ++ +++a+k+
  KHJ34140.1 373 KQMN---LSVPIIVRLKGTNME-----IANQMIAESGLRIFSIEDLQSAAEKS 417
                 ***8...***************.....8999*************999999886 PP

>> ATP-grasp_5  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.1   1.1e-08   5.1e-05       7     220 ..      29     252 ..      24     254 .. 0.82

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 1.1e-08
  ATP-grasp_5   7 rtlLteaeakelleaygipvvetrlassaeeaveaaeeigyp.vvlKivs......pdilhKtdvgGvrlnlkdaeevraaaeeiler.vkekspear 96 
                       e+ +++ll+ y++ v+   +a++ +ea  +a++ig    v+K ++      +++      +Gvr+ l +++e +  ae+++ + + +k+ +a+
   KHJ34140.1  29 ALSIHEYLSADLLRKYDVGVPAGSVAKTGAEAEVVAKKIGGDdLVIKAQVlaggrgKGVFDNGFQKGVRV-LYSQSEAKPIAEKMIGHnLITKQTGAK 125
                  4456788899*****************************8888*****99877777779999999*****.********9999998642444444444 PP

  ATP-grasp_5  97 ...iegvlVqemakrggrElivgvteDp.vFGpvilf.GlGGtavevlkdvavalpplnstlareliertkaskllkgvrgekkadlaaleellvrls 189
                      + v + e +  + rE+ + +  D  +  p+i+   +GG+ +e +++ + +    ++ + +e +    a +++k+   + +  +     +++rl 
   KHJ34140.1 126 grpCNSVYICERKF-SRREFYLAILMDRaSASPIIVSsSQGGMDIETVAKESPEAIKKTRINLHEGVTDDIAREIAKDLGFS-ERCIGDAMIVIQRLY 221
                  11144555544433.99***99999996256677665167**************************************9999.7778888889***** PP

  ATP-grasp_5 190 qLvvdlpeIreldinPllvee.egvvalDari 220
                  +L v+ +  ++++inPl  +  ++v+a+Da++
   KHJ34140.1 222 KLFVE-KDATQVEINPLTETIdHQVLAMDAKL 252
                  ****9.899*********998456*****986 PP

>> GARS_A  Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1     4e-05      0.18       7      71 ..      38     113 ..      34     163 .. 0.69
   2 ?   -1.4   0.1      0.36   1.6e+03      22      65 ..     386     429 ..     371     438 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4e-05
                 HHHHHHTT--B--EEEESSHHHHHHHHHHHSSSEEEEEESC-GGGT-EEEE...........SSHHHHHHHHHHHC CS
      GARS_A   7 kdllkkagiptaeyeaftdpeeakeyieeatakalVvKadglaagKgviva...........kseeealkavkeil 71 
                  dll+k+++  +  ++ +  +ea+ + ++ + + lV+Ka+ la+g+g  v             s++ea  ++++++
  KHJ34140.1  38 ADLLRKYDVGVPAGSVAKTGAEAEVVAKKIGGDDLVIKAQVLAGGRGKGVFdngfqkgvrvlYSQSEAKPIAEKMI 113
                 589999***99999999**************************996655442233333333366666666655554 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.36
                 EESSHHHHHHHHHHHSSSEEEEEESC-GGGT-EEEESSHHHHHH CS
      GARS_A  22 aftdpeeakeyieeatakalVvKadglaagKgvivakseeealk 65 
                 + t++e a+++i e + +++ + +   aa K v   + ++ a +
  KHJ34140.1 386 KGTNMEIANQMIAESGLRIFSIEDLQSAAEKSVQFSQIVKIARN 429
                 45788999999999999999999999999999988777666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3299.83
//
Query:       KHJ34141.1  [L=735]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.7e-10   38.9   0.0    1.3e-09   37.9   0.0    1.5  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.9   0.0   7.5e-14   1.3e-09      16     119 .]     397     494 ..     380     494 .. 0.83

  Alignments for each domain:
  == domain 1  score: 37.9 bits;  conditional E-value: 7.5e-14
  Exo_endo_phos_2  16 nlestlekllselkspkiiilGDfNakhplWgsedtdssargeeLiefleehslsllnllksgptfkssngsstiDltltsdnlalskleleee 109
                        e +++ ll+  + p+ + +GDfN  h +W+    +s  +gee++ + ee++ls+l   +  pt++     +t+Dl +++ +     + + ee
       KHJ34141.1 397 GKEMSVQPLLNWSPPPRSVAIGDFNSVHWAWQPGAATSYGQGEEIELWAEENNLSCLIIGE--PTHRA---GNTLDLAWSNVSGCCA-WVDREE 484
                      55667788888888889***************9887779****************776644..88855...578*******999999.999999 PP

  Exo_endo_phos_2 110 dlgSDHrpil 119
                       l+SDH+pi+
       KHJ34141.1 485 CLTSDHLPIC 494
                      ********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (735 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       634  (0.0353617); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.42
# Mc/sec: 5224.88
//
Query:       KHJ34142.1  [L=775]
Description: putative universal stress protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      8e-23   81.5   0.8    8.7e-15   55.5   0.0    3.2  3  Usp       Universal stress protein family
  ------ inclusion threshold ------
        8.1    6.5   7.5       0.86    9.6   0.1    2.7  3  DUF1676   Protein of unknown function (DUF1676)


Domain annotation for each model (and alignments):
>> Usp  Universal stress protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.07   6.2e+02      67     100 ..     433     466 ..     383     470 .. 0.74
   2 !   21.8   0.0   2.4e-08   0.00022       3      58 ..     543     598 ..     541     610 .. 0.85
   3 !   55.5   0.0   9.8e-19   8.7e-15      51     141 .]     647     737 ..     627     737 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.07
                 HHHHHHHHHHCTTCEEEEEEEESSHHHHHHHHHH CS
         Usp  67 eadaakaaaeaggvkvevvveegdpaeeilevae 100
                 + +++  ++ + + + + +v+ +dp+e++l++ +
  KHJ34142.1 433 DTEKKLSLETENELSSRSEVTTKDPSETLLLAKK 466
                 22224578899999*************9998766 PP

  == domain 2  score: 21.8 bits;  conditional E-value: 2.4e-08
                 SEEEEEE-SSHHHHHHHHHHHHHHHHCTSEEEEEEEEESSHCCCCCCCHHHHHHHH CS
         Usp   3 krIlVavDgseeskkAlewAlelakargaelillhvidprasgavsdadeeaeeee 58 
                 ++ lVavD see+ +Alew +    ++g++l ++++ d++   ++ d+  +  ++e
  KHJ34142.1 543 RKYLVAVDLSEEAAHALEWTIGTVLRDGDTLLAIYCADEEVGISTNDSSLDNITQE 598
                 788**********************************9988776666666666555 PP

  == domain 3  score: 55.5 bits;  conditional E-value: 9.8e-19
                 HHHHHHHHHHHHHHHHHHHH......HHHHHHCTTCEEEEEEEESSHHHHHHHHHHHTTSSEEEEESCCSSTTTTCSSBHHHHHHHHHTSSEEEEEE CS
         Usp  51 deeaeeeeleleeaeleada......akaaaeaggvkvevvveegdpaeeilevaeeedadliVvGsrgrsglsrlllGSvseyvlrhapcpVlvVr 141
                 ++++++ +++ +e               ++++ ++++v  v++ ++p++ i+ev +  ++ l+++Gsrgrs+l++++lGS+s+y++ ++++pV+v r
  KHJ34142.1 647 NKAEQQRRKAVQE------ItdkvskFLRRTNLQVKVVIEVIHCKNPKHLITEVIDFVSPTLVILGSRGRSALKGFILGSFSNYIVTKSSVPVMVAR 737
                 2223333333333......2445666999*****************************************************************976 PP

>> DUF1676  Protein of unknown function (DUF1676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       0.6   5.4e+03      90      90 ..     366     366 ..     331     416 .. 0.51
   2 ?   -2.7   3.5       0.6   5.3e+03      35     123 ..     425     544 ..     383     549 .. 0.63
   3 ?    9.6   0.1   9.6e-05      0.86      48      88 ..     632     678 ..     608     699 .. 0.69

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.6
     DUF1676  90 e 90 
                 e
  KHJ34142.1 366 E 366
                 2 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.6
     DUF1676  35 slvrneeaasassk....eeeeelsreeeeareeelekllleklerflkshslevklpeeldaegaeesisrsleedne.................... 109
                 s+v +e++++++ k    +e+e +sr+e   ++ + + ll++kl+++lk  s e +  + ++ + +e++ + s ++ ++                    
  KHJ34142.1 425 SFVNKESKDTEK-KlsleTENELSSRSEVTTKDPSETLLLAKKLNDLLKMSSDECDSRSNTS-YDSETEAGISDIKHAQklpinttacistpatnrcvr 521
                 555555444333.3477655555556666666666677788888888888877777777766.334444444444333356666666666666666666 PP

     DUF1676 110 ............egRkkkkkkkklkk 123
                             e+R   + +++ +k
  KHJ34142.1 522 sihrgdfikmqqEAR---NNQRRIRK 544
                 666666666666666...44555555 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 9.6e-05
     DUF1676  48 k........eeeeelsreeeeare.eelekllleklerflkshslevklp 88 
                 +        +  ++ ++++ e+ +  +  + + +k+++fl+ ++l+vk+ 
  KHJ34142.1 632 RtsstteniD--RNPEKNKAEQ-QrRKAVQEITDKVSKFLRRTNLQVKVV 678
                 1223222222..2222222222.246788889***************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (775 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1187  (0.0662056); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.26s 00:00:00.92 Elapsed: 00:00:00.42
# Mc/sec: 5537.45
//
Query:       KHJ34143.1  [L=319]
Description: putative mitochondrial phosphate carrier protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-44  148.7   6.8    5.4e-16   58.3   0.1    3.1  3  Mito_carr  Mitochondrial carrier protein
  ------ inclusion threshold ------
       0.03   14.1   0.1       0.18   11.6   0.0    2.1  2  RFX5_N     RFX5 N-terminal domain


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.3   0.1     6e-20   5.4e-16       9      93 ..      35     115 ..      30     119 .. 0.94
   2 !   57.8   0.1   8.5e-20   7.7e-16       6      95 ..     130     214 ..     125     216 .. 0.93
   3 !   35.5   0.4   7.6e-13   6.8e-09       4      93 ..     226     311 ..     223     315 .. 0.91

  Alignments for each domain:
  == domain 1  score: 58.3 bits;  conditional E-value: 6e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   9 llaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                  laG+l+++v++   tP+dvvKtr+q+++k+++k    +++  +++++ +eG  +l  G++p++ +++ + a kf+ ye++k+  
  KHJ34143.1  35 ALAGALCCSVTHGGLTPVDVVKTRIQLDPKTYNK----GLIGGFRQVVAKEGAGALLTGFGPTFAGYFLQGAFKFGGYEFFKQKC 115
                 589****************************988....39******************************************876 PP

  == domain 2  score: 57.8 bits;  conditional E-value: 8.5e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 + +l +++ a  +a+++ +Pl+  ++rl ++++ ++      +++ ++ki+k+eG+ ++y G++p l++++p+++ kfv+ye++ + +++
  KHJ34143.1 130 AVYLGSSASAEFFASIALCPLEATRIRLVSDPTYASG-----LISGFGKILKNEGIGAFYAGFGPILFKQVPYTMSKFVVYEKVSDAIYQ 214
                 567889999*************************998.....******************************************999876 PP

  == domain 3  score: 35.5 bits;  conditional E-value: 7.6e-13
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 +++ +l +G++ag +a+lv +P d++  ++   k+   +     + + l ki ke Gl+g y G++++l++v   +a +f++y  +k+ l
  KHJ34143.1 226 QTVINLGSGLAAGFAAALVSQPADTMLSKINKTKGLPGEG----TTKRLFKIAKELGLKGSYAGIGARLFMVGTLTAGQFAIYGDVKKAL 311
                 6678999******************999999999988774....677888*************************************987 PP

>> RFX5_N  RFX5 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.12     1e+03      16      27 ..       7      18 ..       3      25 .. 0.83
   2 ?   11.6   0.0     2e-05      0.18       9      48 ..     197     238 ..     190     244 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.12
      RFX5_N 16 qsKvdgiLqdve 27
                 +Kvd+ +q v 
  KHJ34143.1  7 SNKVDAAIQKVT 18
                59*****99995 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 2e-05
      RFX5_N   9 nsicKa.vqsKv.dgiLqdveKFtDleKLYLYLqLPsGpssg 48 
                  +++K  v +Kv d+i q v+K t  ++L   ++L sG+++g
  KHJ34143.1 197 YTMSKFvVYEKVsDAIYQKVDKSTTSDRLQTVINLGSGLAAG 238
                 56777515789879************************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2354.29
//
Query:       KHJ34144.1  [L=330]
Description: putative 2-nitropropane dioxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-57  195.8   0.4      1e-56  192.8   0.4    1.9  1  NMO           Nitronate monooxygenase
    2.4e-13   49.8   0.1    6.1e-12   45.2   0.1    2.1  1  IMPDH         IMP dehydrogenase / GMP reductase domain
      0.005   15.9   0.1     0.0087   15.1   0.1    1.3  1  FMN_dh        FMN-dependent dehydrogenase
  ------ inclusion threshold ------
      0.017   14.3   1.8      0.019   14.2   0.0    1.8  2  NanE          Putative N-acetylmannosamine-6-phosphate epimer
      0.019   14.4   0.1      0.041   13.3   0.1    1.5  1  His_biosynth  Histidine biosynthesis protein
      0.062   12.4   0.2       0.16   11.1   0.2    1.7  1  Glu_synthase  Conserved region in glutamate synthase
       0.11   12.6   0.1       0.29   11.1   0.0    1.8  2  DUF1902       Domain of unknown function (DUF1902)


Domain annotation for each model (and alignments):
>> NMO  Nitronate monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.8   0.4   3.9e-60     1e-56       2     328 ..       5     309 ..       4     312 .. 0.88

  Alignments for each domain:
  == domain 1  score: 192.8 bits;  conditional E-value: 3.9e-60
         NMO   2 slltellkikppvvqpgmggiskarLaaavsnaGgLGvlasgyl.taDrlakeirkvkaltdkPfgvnlflpkkdaadraekykkeleeaalelnieeg 99 
                 + lt+ l+ik p+vq+gm ++  a+LaaavsnaG+LG+l + ++ t+  l+keir+ ka+t++Pfgvn+ l  + + ++ +        + +++ +eeg
  KHJ34144.1   5 TKLTQALGIKIPIVQGGMQWVGYAELAAAVSNAGALGILTALTQpTPEDLRKEIRRCKAMTSNPFGVNITLLPALVPPPYA--------EYAKVIVEEG 95 
                 6789999********************************96543399************************9999999933........345577899* PP

         NMO 100 vrfyrkvevvldekvevvsfgfglpteevvarlkeagvvliptissvkearkvearGaDalivqGpeaGGhqGtpevgdkglfaLvpqvldavdiPviA 198
                 +r              +v  ++g  +   +++lkeag++++   +++ +a  ++++G D l ++G e  Gh G+ ++     f L+ ++++ +++P iA
  KHJ34144.1  96 IR--------------IVE-TAGNSPGRIINQLKEAGTIILHKCTTIRHALSAIKLGVDFLSIDGFECAGHVGESDI---TNFILLSKARQSLSVPFIA 176
                 **..............555.5666669**********************************************6666...69***************** PP

         NMO 199 aGGiidrrgvaaaLalGAsgvqigtrfLltkesdakdahkkklleaklddteltsavsGrpaRalatelleelee.akiatlalpeah..elakkiraa 294
                  GG+ d++g+aaaL+lGA+g+ +gtrf+ t e++ ++  k+ +++a ++ t+l+ +      R  +++++ +  +  k  + +  e++     +k    
  KHJ34144.1 177 SGGFADGQGLAAALSLGAEGINMGTRFMCTVEAPIHENIKREIVKADENSTQLVMRRWKNTTRLYKNKVTLQAIKiEKDSPTGKFEEIapLVSGKRGRE 275
                 ***************************************************988776669********9866554467777766666533333333344 PP

         NMO 295 lveagnteegllwagqgidrldkiisvkeLiesL 328
                 +   g++e g+  agq+ + +++i+++ eL++ +
  KHJ34144.1 276 VYTTGDPEHGVWTAGQVLGLIHDIPTCDELVKRI 309
                 55557**************************987 PP

>> IMPDH  IMP dehydrogenase / GMP reductase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.2   0.1   2.4e-15   6.1e-12      23     250 ..       3     214 ..       1     250 [. 0.82

  Alignments for each domain:
  == domain 1  score: 45.2 bits;  conditional E-value: 2.4e-15
                 --EESSTTEEESSSEEE-SSTTT-SHHHHHHHHHTTSEEEE-SS..S-HHHHHHHHHHHHTSTTSXBXTTSXB-EEEEE-SSTTHHHHHHHHHHTT-SE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       IMPDH  23 lktkltkkiklniPlvsaamdtvtesemAialareGgigvihkn..lsieeqaeevkkvkrspnaakdekgrllvgaavgvkedalervkalveagvdv 119
                  +tklt+ + ++iP+v   m++v  +e+A a++++G++g++      ++e+  +e+++ k + ++    +   l  a v     + e +k +ve+g+ +
  KHJ34144.1   3 FQTKLTQALGIKIPIVQGGMQWVGYAELAAAVSNAGALGILTALtqPTPEDLRKEIRRCKAMTSNPFGVNI-TLLPALVPP--PYAEYAKVIVEEGIRI 98 
                 589**************************************875115778999999999955444333333.333444444..589**********886 PP

                 EEEE-STSSSHHHHHHHHHHHHHTTTSEEEEEEE-SHHHHHHHHHTT-SEEEE-SS-STTBHHHHHCSB---HHHHHHHHHHHHCTCT-EEEEES---S CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       IMPDH 120 lvvdsahghsekvleavkeikkkveeveviaGnvataegakaLieagadavkvGiGpGsiCttrvvagvGvpqltAvaevaeaakkagvpviaDGGiky 218
                   v++a g+s +  + ++++k++    ++i    +t   a + i+ g+d++ +    G  C       vG + +t  +  ++a ++  vp ia GG   
  KHJ34144.1  99 --VETA-GNSPG--RIINQLKEAG---TIILHKCTTIRHALSAIKLGVDFLSI---DGFECA----GHVGESDITNFILLSKARQSLSVPFIASGGFAD 182
                 ..5666.55544..5577888777...58999999999999999999999977...455565....568****************************** PP

                 HHHHHHHHHTT-SEEEESCCCTTBTTSSSEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       IMPDH 219 sgdivkAlaaGadavmlGsllagteEspgevi 250
                  + ++ Al++Ga+ + +G  +  t E+p +  
  KHJ34144.1 183 GQGLAAALSLGAEGINMGTRFMCTVEAPIHEN 214
                 ***************************97655 PP

>> FMN_dh  FMN-dependent dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   3.4e-06    0.0087     217     309 ..     117     209 ..     107     232 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3.4e-06
                 SEEEEEEE-SHHHHHHHHHTTESEEEE--..GGGTSSTT---HHHCHHHHHHHH..SS-EEEESS--SHHHHHHHHHTT-SEEEESHHHHHHHHH CS
      FMN_dh 217 lplvvKGvltaedakraveaGvdgivvSN..HGGRqldgapatidvLpeiveavggrievlvDgGirrGsDvlkAlalGAdavllGRpflyglaa 309
                 + +++    t + a  a+++Gvd + +      G+  ++ ++ +  L + ++ +   ++ +++gG+  G+  + Al lGA+++ +G  f+  + a
  KHJ34144.1 117 GTIILHKCTTIRHALSAIKLGVDFLSIDGfeCAGHVGESDITNFILLSKARQSLS--VPFIASGGFADGQGLAAALSLGAEGINMGTRFMCTVEA 209
                 6677777888889999999999988886422578888999999999999999997..*****************************999887765 PP

>> NanE  Putative N-acetylmannosamine-6-phosphate epimerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.4       1.8   4.6e+03       3      16 ..      29      42 ..      28      45 .. 0.84
   2 ?   14.2   0.0   7.4e-06     0.019      83     174 ..     108     201 ..      97     208 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.8
                HHHHHHHHHT-SEE CS
        NanE  3 amakaaeqaGavgi 16
                 +a a+++aGa gi
  KHJ34144.1 29 ELAAAVSNAGALGI 42
                579999999*9998 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 7.4e-06
                 HHHHHHHHH--EEEEE-SSHHHHHHHHHTT-SEE...E-TTTTSSTTS-.SS--HHHHHHH.HHTT--EEEES---SHHHHHHHHTT--SEEEE-H CS
        NanE  83 elikkikekyqllmaDistleeglvakklGvdiv...GttlsGytkeeekaepDfalvkal.seaglkviaeGrintPekakkaieiGvdavvvGs 174
                 ++i+++ke +++++  + t+  +l a klGvd++   G    G+++e+  +  +f l+ +  ++  +  ia G +   +  + a+ +G++ + +G+
  KHJ34144.1 108 RIINQLKEAGTIILHKCTTIRHALSAIKLGVDFLsidGFECAGHVGES--DITNFILLSKArQSLSVPFIASGGFADGQGLAAALSLGAEGINMGT 201
                 799******************************822233344444433..3344555544404456779999999999999999999999998886 PP

>> His_biosynth  Histidine biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.1   1.6e-05     0.041     178     223 ..     158     203 ..     147     207 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.6e-05
                   --HHHHHHHHHHHSSEEEEESS--SHHHHHHHHHTTCSEEEESHHH CS
  His_biosynth 178 pdleltkelaeavkipviasGGvgsledlkelksegvdavivgsal 223
                    ++ l+++ ++++++p+iasGG ++ + l+++ s g++++ +g+ +
    KHJ34144.1 158 TNFILLSKARQSLSVPFIASGGFADGQGLAAALSLGAEGINMGTRF 203
                   6888999*******************************99998765 PP

>> Glu_synthase  Conserved region in glutamate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   6.1e-05      0.16     274     310 ..     171     207 ..     127     215 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6.1e-05
                   G-EEEEESS--SHHHHHHHHHHT-SEEE-SHHHHHHT CS
  Glu_synthase 274 rvsliadGglktgadvvkalalGAdavgigtaalial 310
                    v  ia+Gg+  g+ ++ al lGA+ +++gt  + ++
    KHJ34144.1 171 SVPFIASGGFADGQGLAAALSLGAEGINMGTRFMCTV 207
                   46679***************************99876 PP

>> DUF1902  Domain of unknown function (DUF1902)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       3.7   9.6e+03      15      37 ..      24      45 ..      24      54 .. 0.71
   2 ?   11.1   0.0   0.00011      0.29       9      42 ..     281     312 ..     275     325 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 3.7
                EEEE-SSSTT---EESSHHHHHH CS
     DUF1902 15 WvaesddipGlvteaetleeLlk 37
                Wv+ ++ +  +v +a++l +L++
  KHJ34144.1 24 WVGYAE-LAAAVSNAGALGILTA 45
                666654.4458888888888875 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00011
                 ETTTTEEEEE-SSSTT---EESSHHHHHHHHHHH CS
     DUF1902   9 DeeAgVWvaesddipGlvteaetleeLlkkleam 42 
                 D e gVW a   ++ Gl+ + +t +eL+k++e  
  KHJ34144.1 281 DPEHGVWTA--GQVLGLIHDIPTCDELVKRIEIE 312
                 8899***87..68*****************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 2450.78
//
Query:       KHJ34145.1  [L=512]
Description: putative glutamate decarboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.3e-74  248.9   0.0    8.1e-74  248.6   0.0    1.1  1  Pyridoxal_deC  Pyridoxal-dependent decarboxylase conserved do
    4.3e-05   22.6   0.0    6.3e-05   22.1   0.0    1.2  1  Aminotran_5    Aminotransferase class-V
  ------ inclusion threshold ------
       0.05   12.3   0.0       0.08   11.7   0.0    1.3  1  OKR_DC_1       Orn/Lys/Arg decarboxylase, major domain
       0.12   12.3   0.0       0.26   11.3   0.0    1.5  1  Steroid_dh     3-oxo-5-alpha-steroid 4-dehydrogenase


Domain annotation for each model (and alignments):
>> Pyridoxal_deC  Pyridoxal-dependent decarboxylase conserved domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.6   0.0   1.8e-77   8.1e-74      56     374 ..      91     396 ..      57     397 .. 0.93

  Alignments for each domain:
  == domain 1  score: 248.6 bits;  conditional E-value: 1.8e-77
                    HHHHHHHHHT-BTSSTTTSHHHHHHHHHHHHHHHHHTT--GGGTCCT-EEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTS.HHHHHCCEEEEEE CS
  Pyridoxal_deC  56 lgdlLadainkngftweesPaltelevvvldwlaellglpeeflekegggvlqvgssestllallAartkvikemkekgkelkeaeildklvlyts 151
                    + dl+++a  kn++++ee+P+++el+++++ +++ l+++p+ +     +g+ +vgsse+++la+lA++++++k    +gk+      +dk++++ s
     KHJ34145.1  91 AEDLMTEAFSKNFIDFEEYPQTVELQNRCVSMIGRLFNVPTSNSI-APVGTSTVGSSEAIMLAVLAMKKRWQKSRISAGKP------YDKPNIVMS 179
                    458889**********************************66555.49*********************************......9******** PP

                    TTS-HHHHHHHHHHT-EEEEE--BTTTBB-HHHHHHHHHHHHCTT.EEEEEEEEBS-TTT-BB--HHHHHHHHHH..CT-EEEEE-TTGGGGGGSG CS
  Pyridoxal_deC 152 dqahssvekaalvlgvklrvipldengklrgaalekaieedkekGlipffvvatlGttvlgaFddlkelgdicek..ydlwlHvDAAyaGsaficp 245
                    + +++++ekaa++++++ +++ ++++   ++ ++ +a+  ++e+  ++  ++++lGtt++g+++d k ++d++ +  +d+ +H+DAA++G  f++p
     KHJ34145.1 180 SAVQVCWEKAARYFEIEEKYVFCTQDR--YVIDPGEAVNLVDEN--TI-GICVILGTTYTGEHEDAKAVNDLLIEknIDTVIHIDAASGG--FVAP 268
                    ************************955..999************..77.9**********************999678889*********..**** PP

                    GGGG...GGTTGGGESEEEEECCCCTS--SS-EEEEESSCCGCHHHH-EEECCCT.TTTTTSEECCCGSSSSSG..HHTHHHHHHHHHHHHHHHHH CS
  Pyridoxal_deC 246 eirh...llkgieradSitvnphKlllvlldcsalivkdkealqqalqleaeYLehedsdvaadlgtkaiplsr..rvrilklwfvlralGveglq 336
                    ++ +   +++++e + Si+v++hK++lv+ +++++i++  e l+++l+++++YL+       ad+  +++++s+  ++ i ++++++r lG  g++
     KHJ34145.1 269 FVVPeleWDFRLEKVVSINVSGHKYGLVYPGVGWIIWRGTEFLPKELIFNINYLG-------ADQASFTLNFSKgaSQIIGQYYQLIR-LGKSGYR 356
                    *******************************************************.......9***********9889999*******.******* PP

                    HHHHHHHHHHHHHHHHHHTTTTEEECS...TTBSSEEEEEE CS
  Pyridoxal_deC 337 nqirksvelakyleklirkderfeiva...evelglVcFrl 374
                    + + + +++a+yl + +++ + f i +    + l+lV+Frl
     KHJ34145.1 357 AIMFNLTQIANYLSECLKQLG-FIILSqntVKSLPLVAFRL 396
                    *************98776655.666664656789*****98 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   1.4e-08   6.3e-05      99     317 ..     180     397 ..     121     412 .. 0.83

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 1.4e-08
                  GGGTHHHHHHHHHHTEEEEEE.EBETTSCBEGGGHHHH--TTEEEEEEESBETTTTEB--HHHHHHHHHHT..T-EEEEE-TTTTTTS---HHHHTES CS
  Aminotran_5  99 hanlvpwqelakrtgakvkvi.pldeegeldldelekllnektklvaithvsnvtGtiqpveeigklakkk..galvlvDaaqavghipidvkklgvD 193
                   a  v+w+++a+   ++ k++   +++  +d+ e+ +l++e+t  +++    + tG  ++ +++++l+ +k  + ++++Daa++   +p+ v +l+ D
   KHJ34145.1 180 SAVQVCWEKAARYFEIEEKYVfCTQDRYVIDPGEAVNLVDENTIGICVILGTTYTGEHEDAKAVNDLLIEKniDTVIHIDAASGGFVAPFVVPELEWD 277
                  467799*****9999998887356677899************************************987743699*********************** PP

                  E.......EEEETTT.TTSSTT-EEEEEEHHHHHTS..SS.STTSEEEEETTEEEEHCTTGGGS.SS--HHHHHHHHHHHHHHHCHHHHHHHHHHHHH CS
  Aminotran_5 194 f.......lafsghK.llgPtGiGvlyvrkellekleplllggemveevsleettfaeapskfeaGTpnvagiiglgaaleyleeigleaiekhekel 283
                  f       + +sghK  l  +G+G ++ r    e l     ++e++ ++++ ++ +a+    f  G  +++g +   + ++ l + g++ai+   ++ 
   KHJ34145.1 278 FrlekvvsINVSGHKyGLVYPGVGWIIWRG--TEFL-----PKELIFNINYLGADQASFTLNFSKGASQIIGQYY--QLIR-LGKSGYRAIMFNLTQI 365
                  *7777666779****879999********9..5665.....7889999999999999999999998877766653..4444.5599999999999999 PP

                  HHHHHHHHCTSTTEEEES.-B-CTCBSEEEEEET CS
  Aminotran_5 284 aeyllerlkslpgvrlygpdkaerrasivsfnfk 317
                  a+yl e lk+l+ + l  ++++ ++  +v+f ++
   KHJ34145.1 366 ANYLSECLKQLGFIIL--SQNTVKSLPLVAFRLN 397
                  9999999999999988..4566777777777765 PP

>> OKR_DC_1  Orn/Lys/Arg decarboxylase, major domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.8e-05      0.08     165     240 ..     219     292 ..     123     298 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.8e-05
                 TTGSESEEEEESS-TTSEEE-HHHHHHHH..TTSESEEEEE-TT-TTGGGSGGGTTSSSSSSS-BTTBEEEEEEEHCC CS
    OKR_DC_1 165 dakaprlavitnsTYdGvlynakeivdkl..eklsdrilfDeAwvgyeqfiplyadaskllaenendpgilvtqSvHK 240
                 d+++   +vi  +TY G   +ak + d+l  ++++  i++D A +g++    +++ + + ++e    +++    S HK
  KHJ34145.1 219 DENTIGICVILGTTYTGEHEDAKAVNDLLieKNIDTVIHIDAASGGFVAPFVVPELEWDFRLE----KVVSINVSGHK 292
                 4455678********************97333456789*******998655555555555555....66666666666 PP

>> Steroid_dh  3-oxo-5-alpha-steroid 4-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   5.8e-05      0.26      80     113 ..     358     395 ..     343     408 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.8e-05
  Steroid_dh  80 glFelvsapnyfgEilewigyalvtk....slaalaFa 113
                  +F+l   +ny+ E+l+ +g+ ++++    sl+ +aF+
  KHJ34145.1 358 IMFNLTQIANYLSECLKQLGFIILSQntvkSLPLVAFR 395
                 68*********************976111144445554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (512 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       644  (0.0359195); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.29s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3529.19
//
Query:       KHJ34146.1  [L=250]
Description: putative ob-fold nucleic acid binding domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.3e-12   44.6   1.2    1.2e-07   31.0   0.0    2.2  2  Stn1             Telomere regulation protein Stn1
     0.0026   17.7   0.3        1.8    8.6   0.1    3.1  3  tRNA_anti-codon  OB-fold nucleic acid binding domain


Domain annotation for each model (and alignments):
>> Stn1  Telomere regulation protein Stn1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0   1.4e-11   1.2e-07      55     103 ..      48      96 ..      44     109 .. 0.93
   2 !   12.0   0.7   8.1e-06     0.073     120     173 ..     172     228 ..     165     248 .. 0.82

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 1.4e-11
                 ---EEETTEEE-EEEEEEEEEEEEEE....TTEEEEEEE-SSS-EEEEE CS
        Stn1  55 rdilfylnrpirrikvvGlvvgvkwklikgedkavlkiDDcsdkllkck 103
                 r+ l+y+n+pi++++v G++v+++    + + k + ++DD+s++ ++c 
  KHJ34146.1  48 RKLLHYGNHPIKWVRVTGVIVAIDCGGNGSNFKRIYTLDDSSGSCIECS 96 
                 57899*********************9999999************9996 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 8.1e-06
                 TT-EEEEEEEEE..SSS-EEEEEEEEEE-STTHHHHHHHHHHHHHHH.HHHHHHHH- CS
        Stn1 120 iGstvavfGkln..reeveleveflelvkglesEiefWrkamllrke.Lakpweldp 173
                 +Gs+v++ Gk++   ++   e+ +le+++    E+  W++ +++r + L+k w l+ 
  KHJ34146.1 172 VGSVVKIKGKVDvwWDHKRVEIVKLEILRCTDIEVRCWNEVIRFREDiLNKSWVLTA 228
                 8***********99666777789*********************9874677776665 PP

>> tRNA_anti-codon  OB-fold nucleic acid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.9   0.0    0.0058        52       1      36 [.      61      99 ..      61     129 .. 0.70
   2 !    8.6   0.1    0.0002       1.8      45      68 ..     169     193 ..     167     199 .. 0.77
   3 ?    1.5   0.0     0.034   3.1e+02      29      52 ..     203     225 ..     200     227 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0058
                     EEEEEEEEEEE.EEEETTEEEEE....EEETT.EEEEEEEET CS
  tRNA_anti-codon  1 VtvaGrvtsis.drsggkvifid....lrDgt.griqvvlfr 36
                     V+v G +++i      g+ ++++    l+D +  +i++++  
       KHJ34146.1 61 VRVTGVIVAIDcG---GNGSNFKriytLDDSSgSCIECSAPA 99
                     7899999999653...44444433345999996688888766 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0002
                      TS-TTSEEEEEEEEEEC.TTSSEEE CS
  tRNA_anti-codon  45 nlkeGdvvrvtGrvkrr.pggelel 68 
                      ++ +G+vv+++G+v  + +++ +e+
       KHJ34146.1 169 KVHVGSVVKIKGKVDVWwDHKRVEI 193
                      7889***********9974443665 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.034
                      EEEEEEETHHHHHHHTTS-TTSEE CS
  tRNA_anti-codon  29 riqvvlfreeatklaenlkeGdvv 52 
                       i+v +++ e+ ++ e++ + ++v
       KHJ34146.1 203 DIEVRCWN-EVIRFREDILNKSWV 225
                      699*****.999999999877776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1810.41
//
Query:       KHJ34147.1  [L=115]
Description: hypothetical protein EV44_g3877 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       255  (0.0142228); expected 358.6 (0.02)
Passed bias filter:                      221  (0.0123264); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 926.85
//
Query:       KHJ34148.1  [L=798]
Description: hypothetical protein EV44_g3821 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-26   93.8   0.0    2.3e-26   92.7   0.0    1.6  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase
    0.00038   20.6   0.0    0.00088   19.5   0.0    1.7  1  RNase_H   RNase H


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.7   0.0   2.6e-30   2.3e-26       6     151 ..     367     517 ..     358     531 .. 0.93

  Alignments for each domain:
  == domain 1  score: 92.7 bits;  conditional E-value: 2.6e-30
                 .S-EEE......-THHHHCTB--...........-------HHHH................HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET. CS
       RVT_1   6 pgsyRpisllsvdykalnkliakrLkdvl..ekllsenqpgfrpgrstldav...edllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvpt 99 
                 p+syRpislls+++k l+ lia rL+  +   k+ls++q+   ++rs +d +   +  l+++++ kk+  ++++D+k+ Fdsv+ e+ll++l++ + p 
  KHJ34148.1 367 PNSYRPISLLSSLGKGLECLIARRLSYWAlkLKILSYDQCSALRHRSAVDLTtalHCDLRKAWEAKKNAGMITVDVKGTFDSVSCERLLYRLKNQGWPI 465
                 78************************99999*******************9998866677779************************************ PP

                 ........................TEEEEESB--ST-TTHHHHHHHHHHHHH CS
       RVT_1 100 klinliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnell 151
                 +li+++ sf+s+r++++ ++   + ++++ +glpqGs++SP+lf l+++  l
  KHJ34148.1 466 SLIEWVDSFFSNRTARICLDRVITDPLPIMNGLPQGSTVSPILFLLYVEVQL 517
                 *******************99978***********************98755 PP

>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   9.8e-08   0.00088       4     131 ..     667     798 .]     664     798 .] 0.72

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 9.8e-08
                 EEEEEEEEEECTTTCEEEEEEECTT..EEEEEEEC..CCCHHHHHHHHHHHHHHHTT.SC......SEEEEEES-HHHHHHHHCCCHHHHHTTSSSETT CS
     RNase_H   4 vvvYtDGsclgnpgeggagavlykegarnisaple..eaqtnnraELsAvieaLkalksd......ekvniytDSkYvvkgitqwvhrwkknawkttse 94 
                 ++vY+DGs+  + g++gag+++y+++++ + + ++  ++     aE++ ++e L+a+ s+      ++v +  D + +v  +++    +   ++   +e
  KHJ34148.1 667 LTVYSDGSSD-KVGKAGAGYCIYRGTQEIVHNWIPlgNTVEVYDAEIIGAVEGLRAACSHimarfaTNVAVCLDNEEAVLRLHTG-SLTPSSSR-EIAE 762
                 79******76.89999******9997665555555436777788***********877887777778888888887666655542.22223333.3344 PP

                 SSBHTTHHHHHHHHHCHCSSEEEEEE-SCCSSSTHHH CS
     RNase_H  95 qkpvknkdlaellkelakkkkvqlkwvkgHaGvpkgN 131
                 ++++ ++       ++a++ +vq+ wv+g + + kgN
  KHJ34148.1 763 FQELCETCCRRNRATVAQEGSVQVGWVPGYQVI-KGN 798
                 446777555555566788999********9888.677 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (798 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       759  (0.0423336); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.31s 00:00:01.00 Elapsed: 00:00:00.47
# Mc/sec: 5093.55
//
Query:       KHJ34149.1  [L=263]
Description: hypothetical protein EV44_g2569 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.055   12.4   0.0      0.062   12.3   0.0    1.1  1  Miga      Mitoguardin


Domain annotation for each model (and alignments):
>> Miga  Mitoguardin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.5e-06     0.062       9     109 ..      41     149 ..      36     205 .. 0.60

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.5e-06
        Miga   9 klspglkkvllavalga....vvlallarylkrrrekkkqkssaeqeelak.evlktasvkkr..asekksrssssks..ndtlslasskassssakls 98 
                 + s+ +  ++l va+      +++++l +++ r+ +++ ++++  + ++   ev++   +k++  +s++k + s s+      +s++ s  +s ++k++
  KHJ34149.1  41 SSSTFTLPIILGVAVPLigaaILFLILQHRYARKMREEDANDPHASLDFGLgEVHQVGRSKRAeaMSREKEKASLSSRqvSMDMSINNSYLPS-YEKRR 138
                 556666667777776442223666777788888777777766666655543144444433333223333333333333003333333333333.45888 PP

        Miga  99 gslqslasvks 109
                 +s +sl s+++
  KHJ34149.1 139 SSRESLDSISM 149
                 88888887654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       624  (0.0348039); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2058.43
//
Query:       KHJ34150.1  [L=501]
Description: putative transmembrane alpha-helix domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-05   24.7   1.7    1.4e-05   24.4   0.3    1.9  2  SKG6          Transmembrane alpha-helix domain
    0.00083   19.0   0.3     0.0023   17.5   0.0    1.8  2  CD34_antigen  CD34/Podocalyxin family
     0.0052   16.7   0.6     0.0052   16.7   0.6    3.2  2  TMEM154       TMEM154 protein family
  ------ inclusion threshold ------
      0.026   14.6   0.0      0.042   13.8   0.0    1.2  1  DUF454        Protein of unknown function (DUF454)
       0.04   14.0   0.7       0.07   13.2   0.7    1.3  1  CcmD          Heme exporter protein D (CcmD)
      0.067   13.1   0.0       0.13   12.2   0.0    1.4  1  DUF3377       Domain of unknown function (DUF3377)
       0.46   10.4   2.8       0.82    9.5   2.8    1.4  1  VPDSG-CTERM   VPDSG-CTERM motif


Domain annotation for each model (and alignments):
>> SKG6  Transmembrane alpha-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.3   5.4e-09   1.4e-05       2      38 .]     251     287 ..     250     287 .. 0.95
   2 ?   -2.2   0.1       1.1   2.9e+03       6      13 ..     355     362 ..     352     367 .. 0.49

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 5.4e-09
        SKG6   2 sdssnsntvaIavaVaVPVaViiivLlailifvrRRk 38 
                 s++++s ++ IavaV +P+ ++ + +la l++ rRRk
  KHJ34150.1 251 SNNGLSGGTKIAVAVIIPLLAVTLFVLAALFMFRRRK 287
                 789999999***************************8 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.1
        SKG6   6 nsntvaIa 13 
                 nsn +++a
  KHJ34150.1 355 NSNPATVA 362
                 55555554 PP

>> CD34_antigen  CD34/Podocalyxin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   9.2e-07    0.0023     102     173 ..     256     330 ..     238     351 .. 0.70
   2 ?   -2.4   0.9       1.2     3e+03     155     189 ..     384     416 ..     376     430 .. 0.73

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 9.2e-07
  CD34_antigen 102 dyskkllialvtsglllaiLlvagyYgclhrRlskskagerLg....EelqyvEngyhdnptlsvae....dtssemqeK 173
                   + ++k+ +a+++  l++ ++++a+++  + rR+ ++k+ e L     Ee  y  n+   +pt+ v e    ++++em+e 
    KHJ34150.1 256 SGGTKIAVAVIIPLLAVTLFVLAALF--MFRRRKQRKHAEELRrkevEEYGYNPNQ---DPTFPVIEsldgNNPQEMREE 330
                   568999********************..99***99999888742211333333332...344555441112245666665 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.2
  CD34_antigen 155 hdnptlsvaedtssemqeKasvnkgaqenGtgsas 189
                    dnp++s  ++++ e +     n g++++G++  +
    KHJ34150.1 384 SDNPLISELNGSNNERHQL--GNMGPTVKGNDNGN 416
                   5999999999888888877..88899999998777 PP

>> TMEM154  TMEM154 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.2   7.1         7   1.8e+04      10      41 ..      69      93 ..      48     125 .. 0.48
   2 !   16.7   0.6     2e-06    0.0052      21     103 ..     192     305 ..     166     314 .. 0.59

  Alignments for each domain:
  == domain 1  score: -5.2 bits;  conditional E-value: 7
     TMEM154 10 taletatleeesadatsaasteseslkqeeak 41
                ++  ++tl ++++++  +a          ++ 
  KHJ34150.1 69 MTAASETLAPTTTPSPNPAQ-------PATTS 93
                33333333333322222221.......11112 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 2e-06
     TMEM154  21 sadatsaasteseslk.......................qeeakeslssaelsnesdqlel.........vlmiiiPlvllillllvviiliqkkkrkr 87 
                 +a ++++++t s++ +                       ++++   +s +el+ + ++ ++          + +iiPl ++ l +l+ +++    +rk+
  KHJ34150.1 192 TAAPSFVTVTLSPTSPggssivtiiqtsthagnpgsksaSSQSSSPTSTPELQRDPSDGSNnglsggtkiAVAVIIPLLAVTLFVLAALFMF--RRRKQ 288
                 45555566665555555666666665555566665554444444455556666555555555666777768899***999888888877777..44444 PP

     TMEM154  88 sK.ddekseaesdelds 103
                 +K  +e    e +e ++
  KHJ34150.1 289 RKhAEELRRKEVEEYGY 305
                 44044444555555555 PP

>> DUF454  Protein of unknown function (DUF454)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.7e-05     0.042      17      47 ..     263     293 ..     259     306 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.7e-05
      DUF454  17 iGivlPlLPTtpFlLlAafcfarssprlhrw 47 
                 + +++PlL  t F+L A+f+f r ++r h+ 
  KHJ34150.1 263 VAVIIPLLAVTLFVLAALFMFRRRKQRKHAE 293
                 789*********************9998865 PP

>> CcmD  Heme exporter protein D (CcmD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.7   2.7e-05      0.07      12      40 ..     271     299 ..     271     302 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.7e-05
        CcmD  12 gitllvlagLilwslrdrrrllrelrrle 40 
                 ++tl+vla+L++  +r++r+   elrr+e
  KHJ34150.1 271 AVTLFVLAALFMFRRRKQRKHAEELRRKE 299
                 79*************************98 PP

>> DUF3377  Domain of unknown function (DUF3377)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     5e-05      0.13      25      58 ..     258     289 ..     251     294 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5e-05
     DUF3377  25 gtvnaiaVvvPlvLllciLvliyailqfrrkgtp 58 
                 gt  a+aV++Pl  l++ L++++a++ frr+   
  KHJ34150.1 258 GTKIAVAVIIPL--LAVTLFVLAALFMFRRRKQR 289
                 556789999996..577899999*****998655 PP

>> VPDSG-CTERM  VPDSG-CTERM motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   2.8   0.00032      0.82      12      26 .]     273     287 ..     270     287 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00032
  VPDSG-CTERM  12 LglgLlgLlglRRrr 26 
                  ++++L++L+++RRr+
   KHJ34150.1 273 TLFVLAALFMFRRRK 287
                  789***********6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (501 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1054  (0.0587874); expected 358.6 (0.02)
Passed bias filter:                      573  (0.0319594); expected 358.6 (0.02)
Passed Vit filter:                        86  (0.0047967); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.83u 0.31s 00:00:01.13 Elapsed: 00:00:00.48
# Mc/sec: 3141.62
//
Query:       KHJ34151.1  [L=333]
Description: hypothetical protein EV44_g5695 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.03   14.4   0.4      0.058   13.5   0.4    1.4  1  DUF4234   Domain of unknown function (DUF4234)


Domain annotation for each model (and alignments):
>> DUF4234  Domain of unknown function (DUF4234)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.4   3.2e-06     0.058       3      29 ..     296     322 ..     289     330 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.2e-06
     DUF4234   3 lavvilLsivTlGIYslyWlykltrel 29 
                 +++ ilLsiv lGIY+ +  + +tr++
  KHJ34151.1 296 ILTIILLSIVMLGIYQNIIRWFRTRKI 322
                 678899999999999988888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       824  (0.0459591); expected 358.6 (0.02)
Passed bias filter:                      602  (0.0335769); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2406.45
//
Query:       KHJ34152.1  [L=279]
Description: hypothetical protein EV44_g6405 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       315  (0.0175693); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 2138.78
//
Query:       KHJ34153.1  [L=483]
Description: hypothetical protein EV44_g1958 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (483 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       864  (0.0481901); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.45
# Mc/sec: 3239.98
//
Query:       KHJ34154.1  [L=939]
Description: putative chitin synthase 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.1e-77  256.8   0.2    1.2e-76  256.2   0.2    1.3  1  Chitin_synth_1   Chitin synthase
    2.6e-30  104.2   0.1    5.3e-30  103.2   0.1    1.6  1  Chitin_synth_1N  Chitin synthase N-terminal
    1.1e-22   80.3   5.7    1.1e-18   67.1   0.0    2.3  2  Chitin_synth_2   Chitin synthase


Domain annotation for each model (and alignments):
>> Chitin_synth_1  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  256.2   0.2     2e-80   1.2e-76       1     163 []     267     429 ..     267     429 .. 0.99

  Alignments for each domain:
  == domain 1  score: 256.2 bits;  conditional E-value: 2e-80
  Chitin_synth_1   1 mynEdkellarTLkgvmkNieelkkrkkskvwgkdsWkkivVcivsDGrekideetldvlaalgvyqegvakkkvngkevkahlfeyttqlsvde 95 
                     mynEd++l+arT++gv+kNi+++++rk+sk+wgkd+WkkivVc+vsDGr ki+++t +vla +gvyq+g+ak++vngk+v+ah++eyttq+ ++ 
      KHJ34154.1 267 MYNEDDILFARTMNGVFKNIKYMCSRKDSKTWGKDAWKKIVVCVVSDGRAKINPRTRAVLAGMGVYQDGIAKQQVNGKDVTAHIYEYTTQVGISI 361
                     9********************************************************************************************88 PP

  Chitin_synth_1  96 elklkenekslvpvqllfclkeknakkinShrWlfnafarllqPevcvlldvGtkpgkkslyklwkaf 163
                     + +l e + ++ pvq+lfclkekn+kkinShrW+f+af+r+l+P++cvl+d+Gtkpgk+s+y+lwkaf
      KHJ34154.1 362 KKDLVELRPKQQPVQMLFCLKEKNQKKINSHRWFFQAFGRVLDPNICVLIDAGTKPGKDSIYHLWKAF 429
                     88999999999*******************************************************98 PP

>> Chitin_synth_1N  Chitin synthase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.2   0.1   8.9e-34   5.3e-30       2      73 .]     192     266 ..     191     266 .. 0.97

  Alignments for each domain:
  == domain 1  score: 103.2 bits;  conditional E-value: 8.9e-34
  Chitin_synth_1N   2 kkvkLlngnlvldlpvpkkllkalpeee.keseEfthmRYtAvTcdPddftkegytLRqalyg..ReteLlIviT 73 
                      k+v+L++gnlvld+pvp++ll+++p+++  e++EfthmRYtA+TcdP++f +e++tLRq+l+   R+teL+Iv+T
       KHJ34154.1 192 KEVQLFDGNLVLDCPVPPRLLNQVPHAQpPERDEFTHMRYTAATCDPSEFFEERFTLRQRLFAkpRHTELFIVVT 266
                      89***********************999899******************************999**********9 PP

>> Chitin_synth_2  Chitin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.1   0.0   1.9e-22   1.1e-18     204     426 ..     407     637 ..     400     668 .. 0.71
   2 !   11.4   5.0   1.5e-05     0.089     419     492 ..     718     790 ..     678     811 .. 0.74

  Alignments for each domain:
  == domain 1  score: 67.1 bits;  conditional E-value: 1.9e-22
  Chitin_synth_2 204 ivlmvdadtkvapdsltrlvaalvkdpeilglcGetkia..nkkesw...vtaiqvfeyyishhlskafesvfGsvtclPGcfslyrikaakgad 293
                     i++++da tk   ds+ +l  a+  +p+  g cGe k       +     + a q fey is  l k +es fG ++ lPG fs+yr  a ++ +
      KHJ34154.1 407 ICVLIDAGTKPGKDSIYHLWKAFDLEPMCAGACGEIKAMlgPGGKNLlnpLVATQNFEYKISNILDKPLESAFGFISVLPGAFSAYRYIALQNDK 501
                     7899*******************************9964222233331125689*********************************88876644 PP

  Chitin_synth_2 294 gkwvPilvspeiveeysenvvdtlhkknllllGedrylt.tlllktfpkrktvfvpqakcktvaPdtfkvllsqrrrwinstvhn.llelvlvrd 386
                         P+  ++    e  +     +   n ++l edr l   l+ k   +    +v++a+ +t +Pd++  l+ qrrrw+n +    +  +    +
      KHJ34154.1 502 AGDGPL--EKYFAGEKMHGANAGIFTAN-MYLAEDRILCfELVSKRNCHWILQYVKSATGETDVPDQMAELILQRRRWLNGSFFAaVYAIAHFYQ 593
                     444454..33333444444445566677.579*****984588889999999****************************775541334445555 PP

  Chitin_synth_2 387 lcGt.fcfsmrfvvfieligtvvlPvaiaft...lylivasilk 426
                     l      f  +    +e+i t +  + + f    +yl+ +++++
      KHJ34154.1 594 LFRSgHSFLRKIAFLVEFIYTTINMIFAWFAignFYLVFHILTT 637
                     54331233333333345565555555444431114555554444 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 1.5e-05
  Chitin_synth_2 419 livasilksklvpviplvllaivlGlpailivltarkleyvawllvyllalPifnfvlPlyafwhlddfswGet 492
                     + +a ilk+  + +  +v la  + l  ++  l    +++ + ++ yl+ +P +  vl +yaf +  d +wG  
      KHJ34154.1 718 ISIADILKN-QIFYTLIVSLASTYALWFVVSFLFFDPWHMFTSFIQYLILVPTYINVLNVYAFCNTHDITWGTK 790
                     334445553.3344457889999999999999999*************************************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (939 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       864  (0.0481901); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.27s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 6615.03
//
Query:       KHJ34155.1  [L=292]
Description: putative plc-like phosphodiesterase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 2202.21
//
Query:       KHJ34156.1  [L=538]
Description: putative repressible acid phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-35  122.9   0.0    2.5e-35  122.6   0.0    1.1  1  His_Phos_2     Histidine phosphatase superfamily (branch 2)
  ------ inclusion threshold ------
       0.17   11.8   0.1         18    5.3   0.0    2.2  2  Peptidase_M16  Insulinase (Peptidase family M16)


Domain annotation for each model (and alignments):
>> His_Phos_2  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.6   0.0   2.7e-39   2.5e-35       2     374 ..      60     436 ..      59     469 .. 0.86

  Alignments for each domain:
  == domain 1  score: 122.6 bits;  conditional E-value: 2.7e-39
                 EEEEEEEEE--SBB-SHHHH.....HHHHHHHHHHHH.........HHCHHTGCCGGGGT.........--SSSTTS.B-HHHHHHHHHHHHHHHHHCH CS
  His_Phos_2   2 LksvvvviRHGdRtPkqkvk.....ksvtspiflsllkkhkeKlkqlktalekkghfpgtyrkveveklqlilkwggelthaGrkqaeelGrqfrqrYp 95 
                 ++sv+++ RH +R+P+++        s+t+ i  ++++      +  k ++ + ++f++++        q i + g+ lt +G    ++ G  f+++Y 
  KHJ34156.1  60 IESVQTIQRHSERFPTSTYGdggniNSFTQRISEFHSN------NRSKKSFNGTLEFLNSW--------QNIFNSGEFLTGSGAASQFAAGVNFWNQYG 144
                 89**************9876111115666666666665......44788999999999777........****************************** PP

                 ..............TCCHTTSS--.TTEEEEEESSHHHHHHHHHHHHHHCHCCC---S-TTSTTGGG-TTTTCCCEEEHHHHCCCCHHCTTSHHTCHHH CS
  His_Phos_2  96 ..............lgLlrlhlty.kdlkirassegRviaSAaafakGllglegeltdllskdkdllddsnaakdlldeakkklkelltegaeacpafe 179
                                ++ +   t+   +  r+++++R++ S  ++a G++g   +    + + +    +++ ++++++e++ +  +++++ + +c++f 
  KHJ34156.1 145 rilynapsgqlaydPNFPNG--TArPPIVLRTTEQSRIYNSQINWALGFFGSSRQK---TPNPSLTNVTQPFKVVIIPEESNEKWNNTLAPYMSCSNFF 238
                 ********877654333333..44578999********************999955...455555667899999************************6 PP

                 CHHHTGGHCHHHHCHCCCCCHHHHHHHCHHHCTTEEEE-HHHHHHHHHHHHHHHHHHCT-TTGGGCTH..HCHHHHHHHHHHHHHHHC........TTT CS
  His_Phos_2 180 wpikvakrvdelvkylkedmdeniakrleqlcpgesnllakerwdklercfyeknkfdiskicdlydemkydalhnrylkdleelyklakvipqEygig 278
                    +    ++  ++++ +++  +++kr+ +l+p+  +l+  e + +  +c+ye++  + s++c l++e   ++  ++   d  ++y +        g g
  KHJ34156.1 239 M-PEIGWMGEYIHEKYVAKYLDPAVKRFRNLIPEGLMLSTGELHGMQLLCAYETAFIGGSDFCTLFTE--DEWAGFENSLDIIYYYTY--------GHG 326
                 6.5566677888999*****************************************************..*****************9........*** PP

                 CCCCHHHHHHHHHHHHHHHCTSSSEECCS..........CCCECS-SEEEEEE-HHHHHHHHHHCTTTTTBTTB.SSS.....TTT..HCCCS-CT-EE CS
  His_Phos_2 279 peeklkiGllllnpllkkilndlqrtree..........atperhvrlrlyfthdshiysllnaLglpeelagedslaa....ldrlsaspelpymsqi 363
                 +++++++G++++++++++++++l   + +          +t++++++++++f+hd  ++s+l+aL ++   a+++  ++     +++  s+++p+++++
  KHJ34156.1 327 NPTGRAQGIGYVHEIMARLNHSLITSSSSsvnstlsgnaTTFPTNQAFYADFSHDDVLISVLAALSVDYFHAPPNISQFppdpARKFILSQITPFGARL 425
                 ***************************88************************************777777777555558888999************* PP

                 EEEEEEETCTT CS
  His_Phos_2 364 vfelyedssek 374
                 v+e   ++s +
  KHJ34156.1 426 VTETIGCDSAN 436
                 ******94443 PP

>> Peptidase_M16  Insulinase (Peptidase family M16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0     0.002        18      57      95 ..      77     115 ..      63     123 .. 0.85
   2 ?    4.1   0.0    0.0047        42      57      91 ..     354     391 ..     327     402 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.002
                    HHHTTCEEEEEEESSEEEEEEEEEGGGHHHHHHHHHHHH CS
  Peptidase_M16  57 leklGgslnAttsrentvYyvevlskdlekaldvladvf 95 
                        Gg++n++t+r       +  +k++++ l++l+++ 
     KHJ34156.1  77 TYGDGGNINSFTQRISEFHSNNRSKKSFNGTLEFLNSWQ 115
                    5567********************************985 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.0047
                    HHHTTCEE..EEEEESSEEEEEEEEEGGG.HHHHHHHH CS
  Peptidase_M16  57 leklGgsl..nAttsrentvYyvevlskd.lekaldvl 91 
                     ++ + +l  nAtt   n+++y+++ ++d l ++l+ l
     KHJ34156.1 354 SSSVNSTLsgNATTFPTNQAFYADFSHDDvLISVLAAL 391
                    4455555566******************9655666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (538 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 3904.00
//
Query:       KHJ34157.1  [L=214]
Description: putative adenine phosphoribosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.5e-17   61.3   0.0    1.1e-16   60.8   0.0    1.2  1  Pribosyltran  Phosphoribosyl transferase domain
  ------ inclusion threshold ------
      0.026   14.0   0.0      0.035   13.6   0.0    1.2  1  UPRTase       Uracil phosphoribosyltransferase


Domain annotation for each model (and alignments):
>> Pribosyltran  Phosphoribosyl transferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.8   0.0   1.2e-20   1.1e-16      20     114 ..      85     185 ..      69     197 .. 0.87

  Alignments for each domain:
  == domain 1  score: 60.8 bits;  conditional E-value: 1.2e-20
                   EEEEEE.--GGGEEEEEEETTTHHHHHHHHHHSTT-EE-EEEEEE-TTT--EE...............EE----TTSEEEEE-SEESSSHHHHHHHH CS
  Pribosyltran  20 aeilee.yngkpdvvvgiargGvpfakiladeLevplayvrkvkyrpdgseeaargssdes.......rlledpagkkVliVDDildtGgTllaale 108
                    ++le  ++ +pdv+vg + +G+ f++ la +L++ +a vrk+ + p+++ e+a   ++e        +  ++++g++VliVDDi++tGg+ +aa e
    KHJ34157.1  85 LQTLELlNGTRPDVIVGLDARGFLFGPSLALRLGAGFAPVRKRNKLPGPTVETAY--VKEYgsdyfqmQVDAIKKGQSVLIVDDIIATGGSAKAAGE 179
                   45555556789*****************************************984..455568********************************** PP

                   HHHCC- CS
  Pribosyltran 109 lLkekg 114
                   l+++ +
    KHJ34157.1 180 LVEKLN 185
                   *99876 PP

>> UPRTase  Uracil phosphoribosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   3.9e-06     0.035     119     146 ..     155     183 ..     118     199 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.9e-06
     UPRTase 119 i.aertvlllDpviaTGgsaaaaiqlLke 146
                 i + ++vl++D +iaTGgsa aa +l+ +
  KHJ34157.1 155 IkKGQSVLIVDDIIATGGSAKAAGELVEK 183
                 245667**************999777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       252  (0.0140554); expected 358.6 (0.02)
Passed bias filter:                      238  (0.0132746); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1696.69
//
Query:       KHJ34158.1  [L=752]
Description: putative fha domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-14   54.4   0.0    3.2e-14   53.0   0.0    1.8  1  FHA           FHA domain
    0.00054   20.2   0.0     0.0027   18.0   0.0    2.2  1  Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic d
     0.0013   18.3   2.1     0.0028   17.2   2.1    1.6  1  DUF4735       Domain of unknown function (DUF4735)
     0.0093   15.5   0.1      0.019   14.5   0.1    1.5  1  YhfZ_C        YhfZ C-terminal domain
  ------ inclusion threshold ------
       0.22   12.3   3.9       0.29   11.9   0.2    3.1  3  MBD_C         C-terminal domain of methyl-CpG binding protein


Domain annotation for each model (and alignments):
>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.0   0.0   8.9e-18   3.2e-14       1      69 []     192     270 ..     192     270 .. 0.94

  Alignments for each domain:
  == domain 1  score: 53.0 bits;  conditional E-value: 8.9e-18
                 EEEESS.......TTSSEETTSTTSTTTEEEEEEETTCEEEEEEEESSSSSEEETTEEEST....TSEEEE-TTEEEEET CS
         FHA   1 vtiGRs.......sdcdivlddpsiSrkHalikfdkgsgkvyleDlgSknGtfvNgqrigk....gepveLksgdvielG 69 
                 v+iGR        s+++  +d++++Sr+Ha+++ dk+ g ++++D++S+nGtfvNg r++     +ep+eL   d+++lG
  KHJ34158.1 192 VRIGRQtntkttpSPTNGYFDSKVLSRQHAELWADKN-GIIWIKDIKSSNGTFVNGARLSLenreSEPHELEKHDQLDLG 270
                 579999999998888999999****************.******************999999999*************98 PP

>> Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   7.4e-07    0.0027      34      83 ..     214     271 ..     211     275 .. 0.82

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 7.4e-07
                   TTS-TT-EEEEEETTE.EEEEE-CESS--EETTEE-S...ECC.....--TTSEEEETT CS
  Yop-YscD_cpl  34 kevsrkhlkLeveees.vrledlgsrngllvngerve...ele.....lrpgdvlelGt 83 
                   k +sr+h++L +++++ ++++d +s ng++vng r +   + e     l+++d+l lG+
    KHJ34158.1 214 KVLSRQHAELWADKNGiIWIKDIKSSNGTFVNGARLSlenR-EsepheLEKHDQLDLGI 271
                   4579*********887368****************987541.24588899999999995 PP

>> DUF4735  Domain of unknown function (DUF4735)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   2.1   7.7e-07    0.0028      22     128 ..     520     629 ..     505     667 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 7.7e-07
     DUF4735  22 assslssqlldrikqlskkaselidkalpylaksdpeyyeefsklvskpwklpkrlrkldeslilsekepvksfseekSdkClaellgsskkksk...p 117
                  +++  ++++++i + ++  se+ ++ l +++ +++e+ +ef++  + p ++++  +++++ +  +++e+ +s s+++ d+Cl++++ + ++ ++   +
  KHJ34158.1 520 IKEKKAREQAEEIAKQLELESETRRNGLLTVSLNQSEKENEFQPYTQFPKQISHIKTEASSLSPSTKTEVHNSESSDSMDTCLETIFAEIGELNEnfaT 618
                 455566778888888888889999*************************99999999988777788888888899999999*****6655444333449 PP

     DUF4735 118 CtvsdeCwklm 128
                 C+v  e  ++ 
  KHJ34158.1 619 CNVHTEAATVN 629
                 *9998877655 PP

>> YhfZ_C  YhfZ C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.1   5.2e-06     0.019      61     141 ..     208     292 ..     206     373 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 5.2e-06
      YhfZ_C  61 egrydfavvSrlaAeqaleegkeveia.lelGpetYvsahvlllrdgeks....eikdglrvgvDsnSlDqkilteaifegkdvel 141
                 +g +d  v+Sr  Ae  ++++  + i  ++  ++t+v+  +l l++ e++    e +d+l +g+D  S+Dqk+++++ ++  +ve+
  KHJ34158.1 208 NGYFDSKVLSRQHAELWADKNGIIWIKdIKSSNGTFVNGARLSLENRESEphelEKHDQLDLGIDIVSEDQKTVVHHKVA-AKVEY 292
                 6778999***********99997776448999**********9987654422226789****************999888.56766 PP

>> MBD_C  C-terminal domain of methyl-CpG binding protein 2 and 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       1.3   4.6e+03      31      58 ..     142     169 ..     122     174 .. 0.61
   2 ?   11.9   0.2   8.1e-05      0.29      27      87 ..     459     516 ..     443     521 .. 0.78
   3 ?   -2.1   0.1       1.8   6.4e+03      31      70 ..     595     641 ..     565     651 .. 0.46

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.3
       MBD_C  31 asalhtssspitGqkkskkaleknpgvt 58 
                   + + ss+ + G  ++ ++l +np v 
  KHJ34158.1 142 QRSSNISSQKPNGKRSQNQLLVSNPPVL 169
                 2223333355667777777777777665 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 8.1e-05
       MBD_C  27 lqslasalhtss.spitGqkkskkaleknpgvtlnvdqplcksvviteeDIrrQeekVkkaR 87 
                  qs as++++ + +p t    s + + + +  tl +   l++++ +++++I++Q+ kV+++ 
  KHJ34158.1 459 YQSQASHIKQANiEPST----SVSGISQARTGTLGQVMSLMEALSVSKKEIESQNLKVRDLE 516
                 46666666444424554....8888999999999************************9975 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.8
       MBD_C  31 asalhtssspitGqk..kskkaleknp..........gvtlnvdqplcksvv 70 
                 + ++      +++++  ++   l++n+           v+ nvdq    ++v
  KHJ34158.1 595 SDSM-----DTCLETifAEIGELNENFatcnvhteaaTVNRNVDQKTLAEMV 641
                 2222.....3333332233444444444444444444555566665555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (752 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1406  (0.0784204); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.43
# Mc/sec: 5256.20
//
Query:       KHJ34159.1  [L=619]
Description: putative ring finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.9e-16   58.0  42.4    1.4e-12   47.6   4.5    4.3  4  IBR             IBR domain, a half RING-finger domain
    1.1e-14   54.7   2.6      2e-14   53.9   0.2    2.6  2  RWD             RWD domain
    6.4e-06   26.4   5.3    6.4e-06   26.4   5.3    4.3  4  zf-RING_2       Ring finger domain
    0.00012   21.9   4.7    0.00012   21.9   4.7    4.7  4  zf-C3HC4        Zinc finger, C3HC4 type (RING finger)
    0.00096   19.1   8.5    0.00096   19.1   8.5    4.3  3  zf-RING_5       zinc-RING finger domain
     0.0016   18.4   5.4     0.0016   18.4   5.4    4.1  4  zf-RING_UBOX    RING-type zinc-finger
     0.0052   16.5   6.3     0.0052   16.5   6.3    2.5  2  zf-RING_11      RING-like zinc finger
  ------ inclusion threshold ------
      0.013   15.3   4.9      0.013   15.3   4.9    4.7  5  zf-C3HC4_2      Zinc finger, C3HC4 type (RING finger)
      0.093   13.1   6.3       0.44   10.9   0.0    3.0  2  Transpos_assoc  Transposase-associated domain


Domain annotation for each model (and alignments):
>> IBR  IBR domain, a half RING-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   6.5     0.035        71      25      55 ..     189     219 ..     183     227 .. 0.72
   2 ?    2.5   0.7     0.089   1.8e+02      13      35 ..     226     249 ..     217     259 .. 0.70
   3 !   47.6   4.5   7.2e-16   1.4e-12       2      60 ..     277     365 ..     276     368 .. 0.90
   4 !   22.3   7.6   5.5e-08   0.00011      17      53 ..     390     424 ..     378     438 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.035
         IBR  25 dCeaiiekseg..cksvtCskCgfefCfnCkke 55 
                 +C+  + +++g  c   +  +C++ fC++C+++
  KHJ34159.1 189 NCGICLDPKKGdsCY--QMLDCKHVFCIKCLQD 219
                 677555666663222..344599*******986 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.089
         IBR  13 es.dpnlkwCprpdCeaiiekseg 35 
                 ++ d   + Cp+++C + ++++++
  KHJ34159.1 226 NNgDVVSVRCPAAECLQKCKENQE 249
                 443555799******999987776 PP

  == domain 3  score: 47.6 bits;  conditional E-value: 7.2e-16
         IBR   2 kyeklklkkslesdpnlkwCprpdCeaiieksegcks..............................vtCskCgfefCfnCkkewHegl 60 
                 ++ klk+k++lesd+n+++Cpr++Ce+++++++  k                               + C++C f+fC +C + wH++l
  KHJ34159.1 277 RFVKLKYKSELESDKNTIYCPRKWCEGAARSTKYRKPlslndmpstydqsesesenadnlssqksllSVCEECLFAFCNRCFQTWHGEL 365
                 7999*************************999995556677788999999999999*********9888*****************987 PP

  == domain 4  score: 22.3 bits;  conditional E-value: 5.5e-08
         IBR  17 nlkwCprpdCeaiieksegcksvtCskCgfefCfnCk 53 
                  ++ Cp   C+ + +ks+gc+++ C +C++ fC+ C 
  KHJ34159.1 390 HTTACP--TCGIPSQKSHGCNHMICFRCNTHFCYLCS 424
                 4789**..9***************************7 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.2     1e-17     2e-14       3     112 ..       9     144 ..       7     148 .. 0.86
   2 ?   -0.4   0.2      0.66   1.3e+03      59      59 ..     216     216 ..     161     349 .. 0.63

  Alignments for each domain:
  == domain 1  score: 53.9 bits;  conditional E-value: 1e-17
                 HHHHHHHHHHHSTTTCCCCHT--EE--S-EEEEEEECECCCC.................................TT-CEEEEEEEEE-SSTT.SS--E CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............................xxxxxxxxxxxxxxxxxxxx.xxxxx RF
         RWD   3 qeqEleaLesIypdefevienenysikleikikldededeedse.............................feekkkpslkleiklpeeYP.eeaPi 71 
                 ++ El+ L sI+p+   +   ++y+++l ++++++ + +                                   +++++p+l+l i+lp +YP ++aP+
  KHJ34159.1   9 RDVELDCLCSIFPEIQRDPT-NRYTARLLLDVRPQNQIN----VvfvstldnhpftseireqkyiipsndvkpYKISYLPPLNLSITLPDDYPgKSAPE 102
                 567***********998888.567744444444444444....244558888899999****************************************9 PP

                 EEEEECC.SS-HHHHHHHHHHHHHHHHHTTTS--CHHHHHHH CS
                 xxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RWD  72 islsste.nlpkeqvksleekleelaeenlgepvifalidwl 112
                 i ls +  +lp+ ++++l+   ++l+e+ +g++v++++id l
  KHJ34159.1 103 IDLSMKPkWLPDVDLNKLKLTARNLWEQSDGNEVLYEIIDFL 144
                 999988778*******************************87 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.66
                 E CS
                 x RF
         RWD  59 i 59 
                 +
  KHJ34159.1 216 C 216
                 2 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   5.3   3.2e-09   6.4e-06       2      41 ..     189     236 ..     188     241 .. 0.77
   2 !    7.0   2.6    0.0037       7.4       9      40 ..     335     368 ..     333     369 .. 0.69
   3 ?    0.8   0.2      0.31   6.2e+02      33      43 ..     386     397 ..     383     398 .. 0.76
   4 ?   -2.3  14.6       2.9   5.7e+03       2      38 ..     396     431 ..     392     444 .. 0.68

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 3.2e-09
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssst........CP 41 
                 +C+ICl++ + +++++ l+C+Hvf+ +Cl+++  + ++        CP
  KHJ34159.1 189 NCGICLDPKKGDSCYQMLDCKHVFCIKCLQDFYLNAINngdvvsvrCP 236
                 6*****999877777788***********9963333333567777777 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0037
   zf-RING_2   9 elssadsvlll..pCgHvfhreClerwlrssstC 40 
                 +lss++s+l +  +C   f+  C+++w  + + C
  KHJ34159.1 335 NLSSQKSLLSVceECLFAFCNRCFQTWHGELNIC 368
                 5666677663312576569********8887777 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.31
   zf-RING_2  33 wlrssst.CPlC 43 
                 +++ + t CP+C
  KHJ34159.1 386 YIKYHTTaCPTC 397
                 56677778**** PP

  == domain 4  score: -2.3 bits;  conditional E-value: 2.9
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrsss 38 
                 +C+I  ++ +  +++++  C+ +f++ C ++wl +s+
  KHJ34159.1 396 TCGIPSQKSHGCNHMICFRCNTHFCYLC-SNWLSPSN 431
                 3444434444444455447999999999.78998775 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   4.7   6.1e-08   0.00012       1      33 [.     190     230 ..     190     237 .. 0.81
   2 ?    4.5   1.7     0.016        33      15      30 ..     347     362 ..     332     370 .. 0.83
   3 ?   -1.1   0.3      0.88   1.8e+03      34      41 .]     390     397 ..     383     397 .. 0.67
   4 ?   -6.1  14.4         9   1.8e+04      13      28 ..     403     418 ..     390     434 .. 0.77

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 6.1e-08
                 -TTT-S--SS-E...E-TTS--B-CHHHHHHHHC......T CS
    zf-C3HC4   1 CpiCleeakepn..elleCkHsfCskCirkilks......r 33 
                 C iCl+  k  +  ++l+CkH fC kC++  + +       
  KHJ34159.1 190 CGICLDPKKGDScyQMLDCKHVFCIKCLQDFYLNainngdV 230
                 99*******9999***************9988765554443 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.016
                 -TTS--B-CHHHHHHH CS
    zf-C3HC4  15 leCkHsfCskCirkil 30 
                  eC  +fC+ C +++ 
  KHJ34159.1 347 EECLFAFCNRCFQTWH 362
                 69**********9996 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.88
                 SSB--TTT CS
    zf-C3HC4  34 kkvkCPlC 41 
                  ++ CP+C
  KHJ34159.1 390 HTTACPTC 397
                 4456**99 PP

  == domain 4  score: -6.1 bits;  conditional E-value: 9
                 .E-TTS--B-CHHHHH CS
    zf-C3HC4  13 elleCkHsfCskCirk 28 
                 ++  C+H +C+ C ++
  KHJ34159.1 403 KSHGCNHMICFRCNTH 418
                 3579*********765 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   8.5   4.8e-07   0.00096       1      40 [.     189     236 ..     189     246 .. 0.80
   2 ?   -3.3   8.4       4.8   9.6e+03      19      33 ..     348     362 ..     337     399 .. 0.69
   3 ?   -4.3   9.1         9   1.8e+04      20      30 ..     407     417 ..     403     425 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 4.8e-07
   zf-RING_5   1 hCnkCfeklskeekfyltsCgHifCekClkkll........ekeavCp 40 
                 +C +C ++ ++++ + ++ C+H+fC kCl+             +++Cp
  KHJ34159.1 189 NCGICLDPKKGDSCYQMLDCKHVFCIKCLQDFYlnainngdVVSVRCP 236
                 6********99******************9877666666664444444 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 4.8
   zf-RING_5  19 sCgHifCekClkkll 33 
                 +C   fC++C+++  
  KHJ34159.1 348 ECLFAFCNRCFQTWH 362
                 688889999998766 PP

  == domain 3  score: -4.3 bits;  conditional E-value: 9
   zf-RING_5  20 CgHifCekClk 30 
                 C H++C +C +
  KHJ34159.1 407 CNHMICFRCNT 417
                 ********955 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   5.4   8.2e-07    0.0016       1      39 []     190     236 ..     190     236 .. 0.82
   2 ?   -3.2   0.3       4.6   9.1e+03      23      32 ..     239     251 ..     238     256 .. 0.51
   3 ?    0.6   2.4      0.31   6.1e+02      15      25 ..     348     358 ..     338     371 .. 0.74
   4 ?   -4.2   9.4         9   1.8e+04      14      24 ..     405     415 ..     390     435 .. 0.75

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 8.2e-07
  zf-RING_UBOX   1 CpIClelft....dPlvlpCGHtFCreClw.....elskslegafkCP 39 
                   C ICl++ +      + l C H+FC +Cl+      + ++   +++CP
    KHJ34159.1 190 CGICLDPKKgdscYQM-LDCKHVFCIKCLQdfylnAINNGDVVSVRCP 236
                   99****8887544334.49**********656678999*********9 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 4.6
  zf-RING_UBOX  23 eClw...elsksl 32 
                   eCl+   e+++ +
    KHJ34159.1 239 ECLQkckENQEYS 251
                   7994344444443 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.31
  zf-RING_UBOX  15 pCGHtFCreCl 25 
                   +C   FC +C 
    KHJ34159.1 348 ECLFAFCNRCF 358
                   48888999998 PP

  == domain 4  score: -4.2 bits;  conditional E-value: 9
  zf-RING_UBOX  14 lpCGHtFCreC 24 
                    +C H +C +C
    KHJ34159.1 405 HGCNHMICFRC 415
                   37********* PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   6.3   2.6e-06    0.0052       1      29 []     189     217 ..     189     217 .. 0.95
   2 ?   -2.8   0.4       2.9   5.7e+03       5      14 ..     240     249 ..     240     251 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 2.6e-06
  zf-RING_11   1 eCsICLeefkpgqalfilpCsHtFHfkCI 29 
                 +C ICL++ k + +  +l C+H+F  kC+
  KHJ34159.1 189 NCGICLDPKKGDSCYQMLDCKHVFCIKCL 217
                 7***********************99995 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.9
  zf-RING_11   5 CLeefkpgqa 14 
                 CL++ k++q+
  KHJ34159.1 240 CLQKCKENQE 249
                 9***999997 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   4.9   6.6e-06     0.013       2      31 ..     190     222 ..     189     227 .. 0.77
   2 ?    7.7   3.3    0.0016       3.1      14      37 ..     345     368 ..     340     370 .. 0.87
   3 ?   -0.6   0.6      0.61   1.2e+03      35      40 .]     392     397 ..     384     397 .. 0.74
   4 ?   -9.7  15.2         9   1.8e+04      16      28 ..     405     417 ..     393     432 .. 0.78
   5 ?   -2.1   0.2       1.8   3.5e+03       2      31 ..     420     448 ..     419     452 .. 0.48

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 6.6e-06
  zf-C3HC4_2   2 CpiCldmlkdpsvvt..pCgHvfCqkCilr.sL 31 
                 C iCld  k  s  +   C+HvfC kC++  +L
  KHJ34159.1 190 CGICLDPKKGDSCYQmlDCKHVFCIKCLQDfYL 222
                 99****98865544345**********997555 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0016
  zf-C3HC4_2  14 vvtpCgHvfCqkCilrsLeekneC 37 
                 v  +C   fC+ C++++  e n C
  KHJ34159.1 345 VCEECLFAFCNRCFQTWHGELNIC 368
                 5679************98888888 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.61
  zf-C3HC4_2  35 neCPlC 40 
                   CP+C
  KHJ34159.1 392 TACPTC 397
                 48**** PP

  == domain 4  score: -9.7 bits;  conditional E-value: 9
  zf-C3HC4_2  16 tpCgHvfCqkCil 28 
                   C+H  C  C  
  KHJ34159.1 405 HGCNHMICFRCNT 417
                 5699999999854 PP

  == domain 5  score: -2.1 bits;  conditional E-value: 1.8
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgH..vfCqkCilrsL 31 
                 C +C + l+ p  ++p +H  +  ++C +r +
  KHJ34159.1 420 CYLCSNWLS-P--SNPYKHynTLSSSCYMRLW 448
                 555555555.3..3333332233456666655 PP

>> Transpos_assoc  Transposase-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   1.2     0.037        74      30      59 ..     228     257 ..     212     263 .. 0.74
   2 ?   10.9   0.0   0.00022      0.44      18      50 ..     275     309 ..     272     331 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.037
  Transpos_assoc  30 skeeeilCpckkCknkkslsreeveeHLlk 59 
                      +  +++Cp ++C +k+++++e  ++ L +
      KHJ34159.1 228 GDVVSVRCPAAECLQKCKENQEYSKKQLKI 257
                     4556789*********99998876666655 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00022
  Transpos_assoc  18 veeFlefaes.r.lskeeeilCpckkCknkkslsr 50 
                     v+ F++   + +  s++++i+Cp k C+   ++++
      KHJ34159.1 275 VTRFVKLKYKsElESDKNTIYCPRKWCEGAARSTK 309
                     8999999999788999***********99877654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (619 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       852  (0.0475208); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 4430.24
//
Query:       KHJ34160.1  [L=215]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0069   15.8   1.7     0.0069   15.8   1.7    2.5  3  zf-ribbon_3     zinc-ribbon domain
  ------ inclusion threshold ------
      0.081   13.0   0.3      0.081   13.0   0.3    2.9  3  zf-CCHC         Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.4     0.094   8.4e+02      18      22 ..      58      62 ..      56      63 .. 0.68
   2 ?   -3.1   0.1      0.64   5.8e+03       2       6 ..      68      72 ..      67      72 .. 0.71
   3 !   15.8   1.7   7.7e-07    0.0069       1      20 [.      75      94 ..      75      94 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.094
  zf-ribbon_3 18 vCpyC 22
                 +C +C
   KHJ34160.1 58 KCGHC 62
                 57777 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 0.64
  zf-ribbon_3  2 tvrCP 6 
                 t++CP
   KHJ34160.1 68 TRTCP 72
                 67787 PP

  == domain 3  score: 15.8 bits;  conditional E-value: 7.7e-07
  zf-ribbon_3  1 stvrCPnCGa.plssddnvCp 20
                 +++rC+nCG+ + ++ d++Cp
   KHJ34160.1 75 QEIRCSNCGKkH-KAWDPICP 94
                 689*******88.*******9 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.3     9e-06     0.081       2      17 ..      39      54 ..      38      55 .. 0.92
   2 ?   -5.2   1.9         2   1.8e+04       6       7 ..      59      60 ..      58      62 .. 0.53
   3 ?    4.2   0.8    0.0055        49       2       8 ..      78      84 ..      77      85 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 9e-06
                CTSSSSSSSSTTTTST CS
     zf-CCHC  2 kCynCGepGHiardCp 17
                +Cyn ++ GHia++C+
  KHJ34160.1 39 QCYNFQKYGHIAKNCS 54
                79999**********6 PP

  == domain 2  score: -5.2 bits;  conditional E-value: 2
                SS CS
     zf-CCHC  6 CG 7 
                CG
  KHJ34160.1 59 CG 60
                55 PP

  == domain 3  score: 4.2 bits;  conditional E-value: 0.0055
                CTSSSSS CS
     zf-CCHC  2 kCynCGe 8 
                 C nCG+
  KHJ34160.1 78 RCSNCGK 84
                7*****7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.36
# Mc/sec: 1767.84
//
Query:       KHJ34161.1  [L=450]
Description: hypothetical protein EV44_g1727 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.19s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 3783.00
//
Query:       KHJ34162.1  [L=191]
Description: putative duf962 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-26   90.4   1.0    7.9e-26   90.0   1.0    1.2  1  DUF962    Protein of unknown function (DUF962)


Domain annotation for each model (and alignments):
>> DUF962  Protein of unknown function (DUF962)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.0   1.0   4.4e-30   7.9e-26       3      94 ..       4     158 ..       2     159 .. 0.98

  Alignments for each domain:
  == domain 1  score: 90.0 bits;  conditional E-value: 4.4e-30
      DUF962   3 sleefyafYlaeHsnpinrllHfigvplilltvlllllrak.......................................................... 43 
                 +le+++ fY+a+H+n +n+++H+ +vplil+++l+l+ +++                                                          
  KHJ34162.1   4 DLEKQLCFYGAYHHNSVNIAIHITCVPLILAATLTLATNTPtlipipewltlpnlppnlgtltaifygifyillepvagtamlpllmgwtaysnhltst 102
                 6899********************************99999********************************************************** PP

      DUF962  44 .....lklllalfvvgyifafvGHfvfEkrkPAlfknplqsllidplmvllellgk 94 
                       k+++a+ +v++i++f+GH+v+E+r PAl++n++q+l+++p++v+ e+l++
  KHJ34162.1 103 ipslsNKVAIAVEIVAWIAQFLGHGVYEGRAPALMDNLVQALVLAPFFVFMEILFR 158
                 ***999**********************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.21s 00:00:00.57 Elapsed: 00:00:00.35
# Mc/sec: 1646.72
//
Query:       KHJ34163.1  [L=553]
Description: putative signal peptide protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-59  202.1   5.7    9.2e-59  199.3   5.7    2.1  1  Peptidase_A22B  Signal peptide peptidase
  ------ inclusion threshold ------
        9.3    5.6  21.0         24    4.3  12.1    3.5  3  SPP             Signal-peptide peptidase, presenilin aspartyl


Domain annotation for each model (and alignments):
>> Peptidase_A22B  Signal peptide peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.3   5.7     1e-62   9.2e-59       6     282 ..      85     477 ..      80     479 .. 0.85

  Alignments for each domain:
  == domain 1  score: 199.3 bits;  conditional E-value: 1e-62
                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXX............. CS
  Peptidase_A22B   6 aetitkkeaillpitaslvlllLylffkslak.eflvvlltvlivllgvvalasllsplvt...rlflkkvelakvklefla............. 83 
                     ++ ++  +ail+p++a+++l +Lyl++k+l++ + l  +l+ ++  +gv+++ +l + +++   ++++ ++  +k ++ f+              
      KHJ34163.1  85 IQGLKPSDAILFPVMAGIILGGLYLLIKWLDDpKLLSKVLNWYFSGIGVIGVGKLTVDILNviiSFVFPRLWSTKNEIYFIDainlyqltessse 179
                     56678899*********************97647999********99999998888877772223444444445555444445556666666666 PP

                     ...........................................................XXXXXXXXXXXXX------S-.-XXXXXXXXXXXXX CS
  Peptidase_A22B  84 ...........................................................ielkaaeivalllsiviavlw.llkrhwilndilgl 118
                                                                                + ++ ++++  ++ +++++l+ +l r w l++++++
      KHJ34163.1 180 sgtnlvsvksikdvsnplpgfmsiipfpsslsskiwytralfknhlifrgyiknlmriaVPIRLTHVIGYTFGLIVIILYnFLARPWWLTNLIAF 274
                     666666666666666666666677777777777777777777777777778888877779999999******99999988356666********* PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Peptidase_A22B 119 alailviellrlpslkvgalLLvglflYDifwVFgtdvmvevAkeldiPillklPqlsneieeaskfsiLGlGDivlPGllialllrfdiskkkt 213
                     +++  +++l+   ++ +g+l+L+glf+YDi +VF t +mv+vA +ld+Pi+l++P         +k s+LGlGD+vlPG++ial+lrfd + +  
      KHJ34163.1 275 GFCYSTLQLMSPTTFWTGTLVLSGLFIYDITMVFYTPLMVTVASSLDVPIKLVFPG-------PKKGSMLGLGDVVLPGIMIALALRFDLYLHYL 362
                     *******************************************************9.......7889**********************998877 PP

                     XX......................................................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Peptidase_A22B 214 taeskeaqg...............................................kYfvvtlvaYvlgLlitivalalfkaaQPALLYlvPatl 261
                     ++ +++ ++                                               +Yf ++l++YvlgL++t+++l++f++aQPALLYlvP +l
      KHJ34163.1 363 KK-QRALKSppnpnetavvkpdyieatgawgekfwtsslehkssyqtiadgarfkkVYFWTSLLGYVLGLVVTLFVLKVFNHAQPALLYLVPGVL 456
                     65.455555677899******************************************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXX CS
  Peptidase_A22B 262 lvllllallrgelkklwneee 282
                     l+l  +a++rge+k+++ ++e
      KHJ34163.1 457 LSLWGTAWARGEIKTMYDYTE 477
                     *****************9987 PP

>> SPP  Signal-peptide peptidase, presenilin aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.21   1.9e+03      87     119 ..     137     169 ..     121     181 .. 0.74
   2 ?    4.3  12.1    0.0027        24      92     218 ..     243     350 ..     218     362 .. 0.71
   3 ?   -0.7   0.1     0.087   7.8e+02     238     270 ..     422     455 ..     408     464 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.21
         SPP  87 vaglvnlaslvvaialvvllyaypeWyvidlaG 119
                     v +  ++++ ++  l  +++e y id++ 
  KHJ34163.1 137 GKLTVDILNVIISFVFPRLWSTKNEIYFIDAIN 169
                 444566777788888888888999999999875 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.0027
         SPP  92 nlaslvvaialvvlly...aypeWyvidlaGvilavGvsalfGislgvlpavvllialavydaisvyktkhmialaegvvdlklPillvvPetlaysfv 187
                  + +++ + +l+v+++       W++++l+ + ++     l+  + + ++   +l  l +yd   v+ t  m+++a+    l++Pi lv P     s  
  KHJ34163.1 243 LTHVIGYTFGLIVIILynfLARPWWLTNLIAFGFCYSTLQLMSPT-TFWTGTLVLSGLFIYDITMVFYTPLMVTVASS---LDVPIKLVFPGPKKGS-- 335
                 44555566666555431112356*****99887766666666544.67999999999******************985...899*999999654333.. PP

         SPP 188 eeafeeaeeaearnvlfiGlGdavlPsilvv 218
                                 ++GlGd+vlP i+++
  KHJ34163.1 336 ----------------MLGLGDVVLPGIMIA 350
                 ................566666666666665 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.087
         SPP 238 lalaGtlvGllv.lsilvlrgrpaaGlPllnsGa 270
                 ++l+G ++Gl+v l++l + +++++ l +l  G 
  KHJ34163.1 422 TSLLGYVLGLVVtLFVLKVFNHAQPALLYLVPGV 455
                 6778888888773445556788888888887775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (553 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.24s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 3877.39
//
Query:       KHJ34164.1  [L=306]
Description: hypothetical protein EV44_g4968 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 2256.01
//
Query:       KHJ34165.1  [L=445]
Description: putative transcriptional activator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
     0.0051   16.2   0.7       0.79    9.2   0.0    2.7  2  zf-ribbon_3  zinc-ribbon domain
  ------ inclusion threshold ------
       0.24   11.0   5.0       0.06   12.9   1.2    1.9  2  Sgf11        Sgf11 (transcriptional regulation protein)


Domain annotation for each model (and alignments):
>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   8.8e-05      0.79      14      25 ..     114     125 ..     111     125 .. 0.83
   2 !    4.6   0.1    0.0025        22       2      17 ..     211     227 ..     210     228 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 8.8e-05
  zf-ribbon_3  14 sddnvCpyCGtk 25 
                  + +++Cp+CG +
   KHJ34165.1 114 TLQIICPKCGLP 125
                  56899****975 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0025
  zf-ribbon_3   2 tvrCPnCGa.plssddn 17 
                  + +C nCG+ +++s++n
   KHJ34165.1 211 HAKCINCGSfQAASRMN 227
                  678999**988988887 PP

>> Sgf11  Sgf11 (transcriptional regulation protein)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.25   2.2e+03       6      11 ..     118     123 ..     115     123 .. 0.85
   2 ?   12.9   1.2   6.7e-06      0.06       3      30 ..     210     236 ..     208     241 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.25
                 E-TTTS CS
       Sgf11   6 tCpnCg 11 
                  Cp Cg
  KHJ34165.1 118 ICPKCG 123
                 6****7 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 6.7e-06
                 -EEE-TTTSSEEEGGGHHHHHHHHCHHX CS
       Sgf11   3 eyvtCpnCgRqiaasRFApHLekClgrg 30 
                 ++ +C nCg   aasR   H++kC+g g
  KHJ34165.1 210 PHAKCINCGSFQAASRMNKHMSKCIG-G 236
                 7889**********************.4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1151  (0.0641977); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.21s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3377.31
//
Query:       KHJ34166.1  [L=400]
Description: putative trna-specific adenosine deaminase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-24   85.4   1.1      1e-23   84.3   1.1    1.5  1  A_deamin  Adenosine-deaminase (editase) domain


Domain annotation for each model (and alignments):
>> A_deamin  Adenosine-deaminase (editase) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.3   1.1   5.8e-28     1e-23       7     327 ..       2     378 ..       1     380 [. 0.71

  Alignments for each domain:
  == domain 1  score: 84.3 bits;  conditional E-value: 5.8e-28
    A_deamin   7 kciggskls.kkGdvlnDsHAeviaRRallryLysqlelalsk............kkessifepkeekgk.......lklkegisfhlyisttPcGdas 85 
                 kc++++k+  ++G +l+D HAe++a R++ ++L+++   ++++            k +s+ + +++e++k       ++l++g+++h+y+s++PcGdas
  KHJ34166.1   2 KCLSHDKIGqTQGVTLHDWHAEILAIRSFNHFLLKECLALVNTpslslnnnknqeKITSKYLRRRTENEKtefhfqpFALRDGLTLHMYCSEAPCGDAS 100
                 899999996379************************9999944444455554343334445566666665677888899******************** PP

    A_deamin  86 ifskleseeeeekakeakasdvkrtgalrvkiesgegtipvesse.gllrtkdgrGerll..smScsDKlarWnvlGlQGALLshfl..ePiYlssivv 179
                 +  ++ ++ ++     +  +  +++ ++ +  +s++ +     s+ g +r+k++r +  l  s ScsDKl+  +   l  ++ s f+  e +Yl+s v+
  KHJ34166.1 101 MELTMATQIDS-----TPWEMPSSQPDKLHDNQSSQLQGRSYFSNlGSIRRKPSRPDAPLsqSKSCSDKLTLKQFTSLLSSITSLFIspENMYLTSFVL 194
                 99999876444.....445555566666666666664444555555889*****77765411679**********************5555******** PP

    A_deamin 180 gkslysqealerav..ykRl.............alvsklpkpyrvnkpll...sllseees.....krktakaknlsinWsavdeelevvdattGkrqg 255
                  +s y++ a era+  ++Rl             + +s+    y+ +   +   sl +++++     +   ++ ++l  +  a+ ++++ + +  G + +
  KHJ34166.1 195 PTSQYHKVACERAFsaTGRLkllqkqsdidfgqEISSNRSGGYHFQPFSVnptSLEFNYSRrqlllH--LRENESLVASNLASYSTPYIIGTLIGGSLR 291
                 ************9833568765543333333322222444456666666666666666666556431..333333444445555678888888777776 PP

    A_deamin 256 ttkkklgspq.asrlckaelferfkkllsslseeklkasl.............tYkeaKea..akeYqeakkqlkkal.eeqglgsWir 327
                  +k+   s + a  +ck+++++   +l+s++  ++l + l             tY+e+K +   ++ +++k q++++l  ++g++ W r
  KHJ34166.1 292 GRKQ--FSIKgAPPMCKHQMWQLAVELASKIGVKSLLQALgssniknsrisikTYNEMKCTelLSHRRNVKDQIRSVLgGDAGIKGWFR 378
                 6664..34444899**************9999999998888888888888888999988541145556777788877766777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 2968.36
//
Query:       KHJ34167.1  [L=358]
Description: putative atp synthase mitochondrial f1 complex assembly factor 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-39  133.9   0.4    1.1e-38  132.2   0.0    1.9  2  ATP12     ATP12 chaperone protein


Domain annotation for each model (and alignments):
>> ATP12  ATP12 chaperone protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.2   0.0   6.3e-43   1.1e-38       1     129 []      78     227 ..      78     227 .. 0.94
   2 ?   -1.0   0.1     0.094   1.7e+03      38      54 ..     313     327 ..     303     341 .. 0.76

  Alignments for each domain:
  == domain 1  score: 132.2 bits;  conditional E-value: 6.3e-43
                 B---S-EEEEE...TTSEEEEETTEE-BETTSEB--BSSHH..HHHHHHHHHH...T-SSB--GGG-HHHHHHHHHHH.TT..C..........CCHHH CS
       ATP12   1 kRFwkevsveekekdggyqvlLDgrplrtptknilavpsskklLAeaiaaEWdl.saqqalikphllpltslasraiDleaeda..........ttrea 88 
                 kRFw++v+v  +e+d+g+q+ LD+rplr  + ++l++ps+k++LA+aia EWd  ++ ++ +kphl pltsl+sra+D+ ++d            +r++
  KHJ34167.1  78 KRFWDKVHV--REVDNGLQIYLDNRPLRRSNSKTLTIPSTKPHLATAIASEWDFlESTRNALKPHLTPLTSLVSRALDIVESDIadktnninsgAIRDT 174
                 8********..66999**************************************96666666****************998666899************ PP

                 HHHHHHHHHHC-CCCEE.............--SSHHHHHHHHHHHHHHHHHHH CS
       ATP12  89 ivktllryldtDtllcr............eaeepesLrerqeetwepilawle 129
                 iv++llryldtD++lc+            + ++ e Lr+ q++ ++pi+++le
  KHJ34167.1 175 IVESLLRYLDTDSILCWvptpyeipsyenHVSRIEPLRNIQQQSAQPIIDFLE 227
                 ***************************9977899****************986 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.094
                 SSHH..HHHHHHHHHH. CS
       ATP12  38 psskklLAeaiaaEWdl 54 
                 ++ +  +A+ +  EW+ 
  KHJ34167.1 313 EEAA--IAASLESEWQI 327
                 4444..9999*****94 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2848.95
//
Query:       KHJ34168.1  [L=333]
Description: putative respiratory complex assembly protein rmp1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-37  127.2   0.3    5.4e-37  126.7   0.3    1.2  1  NT-C2     N-terminal C2 in EEIG1 and EHBP1 proteins


Domain annotation for each model (and alignments):
>> NT-C2  N-terminal C2 in EEIG1 and EHBP1 proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.7   0.3     3e-41   5.4e-37       1     146 []      20     171 ..      20     171 .. 0.95

  Alignments for each domain:
  == domain 1  score: 126.7 bits;  conditional E-value: 3e-41
       NT-C2   1 kkkrpkflldlkihelsnipqssgelyvkwrrkdskgtsssgttekakvqngraewneelkipvtlflnkkgkkfeeKllelsvysvlskskkk..kel 97 
                 k ++pkf+l+lkih+l n+p+++g+ +vkw+++ s++ +++g t +a++++++++w+++  ip++l +nk++k ++++ ++++v + +s s ++   +l
  KHJ34168.1  20 KARKPKFELTLKIHDLVNVPLVTGTSFVKWHLPTSTAAEHRGRTDRAFIREHKVVWKYKRVIPLRLIINKHNK-LQDCMIHFDVVQDYSTSDRSdkITL 117
                 689*****************************************************************99887.*************9555555668** PP

       NT-C2  98 Gkvelnlaeyvned......eepttsrfllkkskkvnsilslsiqlkllrgdydd 146
                 Gk+elnlaeyvne       ee++ +r+l+++s k ns+l++ i++k++ gd ++
  KHJ34168.1 118 GKIELNLAEYVNEVeigldgEESVIRRYLMQES-KINSTLKVGIRMKQIDGDVNF 171
                 ************99*******************.***************999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2528.11
//
Query:       KHJ34169.1  [L=94]
Description: putative cbp4 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-17   63.4   1.3    2.1e-17   63.2   1.3    1.1  1  CBP4      CBP4
  ------ inclusion threshold ------
       0.14   12.0   0.0       0.18   11.7   0.0    1.1  1  zf-ZPR1   ZPR1 zinc-finger domain


Domain annotation for each model (and alignments):
>> CBP4  CBP4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.2   1.3   2.4e-21   2.1e-17      24     104 ..      11      88 ..       3      94 .] 0.79

  Alignments for each domain:
  == domain 1  score: 63.2 bits;  conditional E-value: 2.4e-21
        CBP4  24 lfkyttPtdeeLikrlsPelrkkyeknrelRqkeqqelvkivketsksddpiWktgpikspfeknadeklkdkekfekaea 104
                 l+ y+tPt eeL++r++Pel+k+ ++nre  ++e++++  ++++ +k d+piW +++     +++a e  + k++ +k e+
  KHJ34169.1  11 LVIYVTPTPEELFSRYNPELQKRSLQNREKTKEEFDHFAMKLRDYAKHDKPIWLVAED---ADRKAREARNLKRQPKKDEE 88 
                 789***************************************************9876...33444444444444444333 PP

>> zf-ZPR1  ZPR1 zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     2e-05      0.18     100     152 ..      20      69 ..      15      74 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2e-05
     zf-ZPR1 100 EGlLeqikeelekeegdqaeredeekekieeflekleeliegeepftlildDp 152
                 E l ++   el   ++ + ++++++ke++++f  kl++++++++p+ l+ +D 
  KHJ34169.1  20 EELFSRYNPEL---QKRSLQNREKTKEEFDHFAMKLRDYAKHDKPIWLVAEDA 69 
                 66777777777...34444444468************************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       941  (0.0524848); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 727.64
//
Query:       KHJ34170.1  [L=345]
Description: putative acyltransferase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.1e-08   33.5   0.0    6.4e-08   32.8   0.0    1.3  1  Acetyltransf_1  Acetyltransferase (GNAT) family
    0.00011   22.9   0.0    0.00026   21.7   0.0    1.7  1  Acetyltransf_3  Acetyltransferase (GNAT) domain
     0.0066   16.9   0.0      0.011   16.1   0.0    1.4  1  Acetyltransf_7  Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.0   1.1e-11   6.4e-08      15     117 .]      97     217 ..      83     217 .. 0.79

  Alignments for each domain:
  == domain 1  score: 32.8 bits;  conditional E-value: 1.1e-11
                     HHHHHHHHHHHHHHHSTTCEEEE...EEET..TEEEEEEEEEEEET.............TSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHH CS
  Acetyltransf_1  15 pnedaseeefeesfsleaegllv...aeed..geliGfisllkipd.............ekggvayieslaVspeyrgkGlGsaLlealeerare 91 
                      ++d++++        +++  ++   +  d  ++++G i ++++p              +  + +yi sl   + +rg+Gl+++ l+a+++ ar+
      KHJ34170.1  97 SFPDSFYRKILSP---DPPISFSrsiIWSDpePKVVGGILCRIDPTscpifsterpqdlQGANDIYILSLTLLSPFRGQGLATQALRAVIDVARK 188
                     4555555553333...455455544444444578***********9*************999********************************* PP

                     T...TESEEEEEEETTEHHHHHHHHHTTE CS
  Acetyltransf_1  92 e...gikkivlaveedndaairlYeklGF 117
                     +   +i+ ++++v   n+ a + Y   GF
      KHJ34170.1 189 HkdlNITSLYAHVWTENKDALKWYFDQGF 217
                     *977777889999999******9955777 PP

>> Acetyltransf_3  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   4.4e-08   0.00026      83     132 ..     161     212 ..     141     218 .. 0.82

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 4.4e-08
  Acetyltransf_3  83 lgymlapsfwgkGyateavralleyaf..eelglerlvavidkeNeaSirvl 132
                     l+++l ++f+g+G+at a+ra++++a   ++l+++ l+a++ +eN+   + +
      KHJ34170.1 161 LSLTLLSPFRGQGLATQALRAVIDVARkhKDLNITSLYAHVWTENKDALKWY 212
                     56778889******************7336668889*********9887755 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.9e-06     0.011      26      76 .]     159     219 ..     120     219 .. 0.70

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.9e-06
                     CTEEEEE-GGGTTSSHHHHHHHH......TT..SEEE...EE.EEEETHHHHHHHHHHTTEEE CS
  Acetyltransf_7  26 eitrlaVdpeyrgkGiGraLlea......ae..kgii...le.qlelnaekaikfYeklGFee 76 
                     +i  l  +  +rg+G++++ l+a      ++     +   l+ +++++++ a+k+Y   GF++
      KHJ34170.1 159 YILSLTLLSPFRGQGLATQALRAvidvarKHkdL--NitsLYaHVWTENKDALKWYFDQGFQR 219
                     4444667779************856654311232..134555777776679**********85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2611.96
//
Query:       KHJ34171.1  [L=632]
Description: putative major facilitator superfamily protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-39  134.0  53.4    1.4e-38  132.7  53.4    1.7  1  MFS_1     Major Facilitator Superfamily
    9.5e-17   60.6  25.2    1.7e-16   59.8  24.7    1.7  2  TRI12     Fungal trichothecene efflux pump (TRI12)
    8.2e-12   44.7  14.8    8.2e-12   44.7  14.8    2.6  2  Sugar_tr  Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.7  53.4   2.4e-42   1.4e-38       1     352 [.      38     438 ..      38     439 .. 0.86

  Alignments for each domain:
  == domain 1  score: 132.7 bits;  conditional E-value: 2.4e-42
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslw.lllvlrvlqGlg 98 
                 l+++++ ++l+++ l++alp ++a+ l+ s+ e+ ++ t + l + v ++ +G++s  fGr+++l++++++f++g+++ + a++ + +llv+r  qG+g
  KHJ34171.1  38 LAIITLAASLDATSLSVALP-IIASKLHGSAIEAFWAGTSFLLSSTVIMPSFGSFSHIFGRKPLLITAMISFLAGSIISA-AANNFvVLLVGRSWQGIG 134
                 5789999*************.9*****************************************************55555.466666************ PP

       MFS_1  99 agalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee......... 188
                 ag+++++  ++i+d++p +erg+ +g++sa +s+G++ gp++gg++a+s+ Wr++f+i+ ++  ++f +  ++++ +++  + +s k ++         
  KHJ34171.1 135 AGGIISLTEIIITDLVPLQERGKWYGIVSAVWSVGSVTGPIIGGVFAQSVTWRWIFWINIPIIGVGFTC--VVIFLKQRMTRQESLKVQLcrvdwlgti 231
                 ******************************************************************999..5555555555555555555778999999 PP

       MFS_1 189 .............................................kgtgpaplvpawkallkdpvlw..illialllfffgfsglltllplylqevlgl 240
                                                                  + p+v  ++++ ++      i+ + ++l ++++++ll++ p+++  v+g+
  KHJ34171.1 232 lfigattgllipitwggvmypwssprtltpfivgvlglaifgpyeYYISKEPMVR-LSIFNRP---TscIVYFQAFLHGIVLWSLLYYGPFFFEGVRGY 326
                 9999999999999999999977777777777755555555444444444444444.3333333...145688888888999999*************** PP

       MFS_1 241 sglllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllll.vlvliGfglgfvfpsllalasdlappeeagtas 338
                 s  +++g+++    + +a++a ++g ++  +g+ r  l+++ +l+++ +gl+++  + ++ ++++ + ++ G+g+g+ f+s++ ++   + p  +++a+
  KHJ34171.1 327 S-PVISGVAMFPETFTIAPVAAFTGIVVSMTGKYRWALWGGWILTCVGFGLLYIEDARTPNVTWVsLNIIPGVGMGMLFTSMALAIPAACNPIDMAHAV 424
                 *.788887777777777888*************************************9****99955555777************************** PP

       MFS_1 339 glfntagslggalg 352
                 +++++++ +g ++g
  KHJ34171.1 425 SVYTFFRVFGNCVG 438
                 *******9999887 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.8  24.7   2.9e-20   1.7e-16      63     325 ..      52     307 ..      28     454 .. 0.85
   2 ?   -2.1   0.3      0.16   9.3e+02     448     448 ..     409     409 ..     348     511 .. 0.64

  Alignments for each domain:
  == domain 1  score: 59.8 bits;  conditional E-value: 2.9e-20
       TRI12  63 sasalpnilqdvgqsensslfs.tlwttgqavsilvmgrltdrfgrrpfvilthilglvgaivgctatkfntllaamtllgvaagpaga.splfvgelm 159
                  + alp i   +  s  +++++ t + +  +v +  +g ++  fgr+p++i + i  l g+i+ ++a++f  ll   +  g+ ag   + + +++ +l+
  KHJ34171.1  52 LSVALPIIASKLHGSAIEAFWAgTSFLLSSTVIMPSFGSFSHIFGRKPLLITAMISFLAGSIISAAANNFVVLLVGRSWQGIGAGGIISlTEIIITDLV 150
                 3468898888888887777764377888888888899*********************************************9988765278999***7 PP

       TRI12 160 s..nktkflgllivsipvvvtsglspylgqrlaiqgswrwifyiyiitsaiavllivvwyyppsfaqlhgkkvrkreelakldwigiilvivgvslfll 256
                    ++ k+ g  ivs+   v s  +p +g  +a   +wrwif+i i +  +  + +v++       q   ++ + + +l+++dw+g il i  ++ +l+
  KHJ34171.1 151 PlqERGKWYG--IVSAVWSVGSVTGPIIGGVFAQSVTWRWIFWINIPIIGVGFTCVVIFLK-----QRMTRQESLKVQLCRVDWLGTILFIGATTGLLI 242
                 6115666666..678888888889*******************************999975.....555556667779********************* PP

       TRI12 257 gvswggkpnspwnsakviglissglgslvvfalyevygkpvrpivppalfkdtrgfvcillissimgam 325
                  ++wgg    pw s + +  +  g+  l +f  ye y   ++p+v  ++f+  r   ci+   + +  +
  KHJ34171.1 243 PITWGGV-MYPWSSPRTLTPFIVGVLGLAIFGPYEYYI-SKEPMVRLSIFN--RPTSCIVYFQAFLHGI 307
                 ******7.57*************************886.578*******96..6667887776665554 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.16
       TRI12 448 a 448
                  
  KHJ34171.1 409 L 409
                 1 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7  14.8   1.4e-15   8.2e-12      54     188 ..      76     204 ..      32     218 .. 0.88
   2 ?   -7.1   9.5         3   1.8e+04     258     335 ..     297     377 ..     279     451 .. 0.63

  Alignments for each domain:
  == domain 1  score: 44.7 bits;  conditional E-value: 1.4e-15
                 THHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHH CS
    Sugar_tr  54 iflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGil 152
                 +fl+ +++    +g ++++fGRk+ l++a + f++g++++aaa+   ++ vl+vgR   Gig+G++  l+ + i  + p + Rg+  ++    +++G +
  KHJ34171.1  76 SFLLSSTVIMPSFGSFSHIFGRKPLLITAMISFLAGSIISAAAN---NFVVLLVGRSWQGIGAGGIISLTEIIITDLVPLQERGKWYGIVSAVWSVGSV 171
                 55555555566788999***************************...**************************************************** PP

                 HHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHG CS
    Sugar_tr 153 vaaifglglnktsnadgwrillglqlvpallllill 188
                  + i+g +++++     wr+ +++++ +  + + ++
  KHJ34171.1 172 TGPIIGGVFAQSVT---WRWIFWINIPIIGVGFTCV 204
                 **********9999...*****99987655555444 PP

  == domain 2  score: -7.1 bits;  conditional E-value: 3
                 HHHHHHHHHHTTHHHHHHHTTTHHHHS.S-THHHHHHHHHHH..HHHHHHHHHH..HHHHHS-SHHHHHHHHHHHHHHHHHHH CS
    Sugar_tr 258 gvvlqifqqltGinaimyysptifenl.glsksllvtiivgv..vnfvatfvai..flvdrfGRRtllllGaagmaicfvilg 335
                 +v  q+f       +++yy+p +fe + g+s+   ++++ ++  + ++a ++a+   +v+ +G+ +  l+G+ + +++ + l 
  KHJ34171.1 297 IVYFQAFLHGIVLWSLLYYGPFFFEGVrGYSPV--ISGVAMFpeTFTIAPVAAFtgIVVSMTGKYRWALWGGWILTCVGFGLL 377
                 555555555555667788888888877344444..333333311444444444455677888888888888777666655553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (632 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       799  (0.0445647); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.29s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4345.69
//
Query:       KHJ34172.1  [L=71]
Description: hypothetical protein EV44_g4360 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.051   14.2   0.1      0.063   13.9   0.1    1.4  1  HSF_DNA-bind  HSF-type DNA-binding


Domain annotation for each model (and alignments):
>> HSF_DNA-bind  HSF-type DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1   3.5e-06     0.063      30      59 ..      39      68 ..       6      71 .] 0.76

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.5e-06
                  HHHHHHTHHHHSTT--HHHHHHHHHHTTEE CS
  HSF_DNA-bind 30 eefakevlpkyfkhsnfssFvrqLnlYgFr 59
                  +++ ++ l+k    ++ ++F+rqLn+ +F+
    KHJ34172.1 39 SKMPADGLTKCLSDQKHQNFIRQLNMVDFK 68
                  445555566999999**************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      245  (0.013665); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 541.24
//
Query:       KHJ34173.1  [L=293]
Description: putative thioredoxin family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-24   84.0   0.3    1.6e-23   82.6   0.1    1.7  2  Thioredoxin    Thioredoxin
    8.6e-16   58.5   0.2    8.6e-16   58.5   0.2    1.6  2  PITH           PITH domain
    1.1e-05   25.0   0.1    1.6e-05   24.4   0.1    1.2  1  OST3_OST6      OST3 / OST6 family, transporter family
    0.00052   20.4   0.4     0.0032   17.9   0.1    2.3  2  Thioredoxin_2  Thioredoxin-like domain
  ------ inclusion threshold ------
      0.047   13.6   0.0      0.099   12.6   0.0    1.6  1  AhpC-TSA       AhpC/TSA family
      0.084   13.2   0.0       0.22   11.9   0.0    1.8  1  Thioredoxin_8  Thioredoxin-like


Domain annotation for each model (and alignments):
>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.6   0.1   5.4e-27   1.6e-23      16      93 ..      14      93 ..       5     100 .. 0.91
   2 ?   -3.6   0.0       3.7   1.1e+04      51      65 ..     210     224 ..     199     234 .. 0.74

  Alignments for each domain:
  == domain 1  score: 82.6 bits;  conditional E-value: 5.4e-27
                 TTSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTT..TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEESS-H CS
  Thioredoxin 16 kekklvlveFyApwCghCkalaPeleklaeelkd..kvklakvdvdenedlakkyevegiPtlklfkngkevkkyegare 93
                 k++ l++++F+A+wCg+Cka++P +ekl+  ++    +k+ak+dvd+ +d+a+ ++++++Pt++++k+g +v++++ga  
   KHJ34173.1 14 KSSALLIIDFFATWCGPCKAISPLFEKLSAPHSSssSIKFAKCDVDKAKDVAQFCGISAMPTFHVYKDGTKVDEIKGADV 93
                 348999***********************9999889*****************************************965 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 3.7
                  SEEEEEETTTSHHHH CS
  Thioredoxin  51 vklakvdvdenedla 65 
                  ++++k d de++dl 
   KHJ34173.1 210 ITICKSDGDEKHDLE 224
                  778888888877764 PP

>> PITH  PITH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       2.2   6.7e+03       5      43 ..      88     124 ..      83     127 .. 0.52
   2 !   58.5   0.2   2.9e-19   8.6e-16       1     151 [.     129     289 ..     129     290 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.2
        PITH   5 IdlkkveclNeseegsvkkvlkksweerldekkyleSda 43 
                 I+ + v+ lN +    +++v+k++ ++++  + +l++ +
  KHJ34173.1  88 IKGADVQQLNVKIGYYTSEVMKNNIKKES--DVSLKKSS 124
                 55566667775554445555544443222..33455555 PP

  == domain 2  score: 58.5 bits;  conditional E-value: 2.9e-19
        PITH   1 LyqyIdlkkveclNeseegsvkkvlkksweerldekkyleSdaDe.qLlihipFtqsvklksllikstkkeeeesaPktiklfkNr...........kk 87 
                 L++ Id +++ +l  s+ +sv+++++ + +  +     + S + + qLl+hi F++ vkl s+ i   k ++ + aP++i +  N            k+
  KHJ34173.1 129 LRDLIDAENSMLLGTSNLSSVRNIISPPPA-GY----AIASVTKSsQLLMHIAFSSVVKLDSIYIIKMK-DSISCAPSRIEVGSNVpiticksdgdeKH 221
                 6789**********9999*******66543.33....588876655*****************997765.677889*********76667777776666 PP

        PITH  88 kldFddas..eptqeielseedeeketvelplrfvkfqnvssLtlffednneg..edvtridyiglkG 151
                  l+ +++s  e++q++++ ++++ ++t++l+l+++kf +v+sLt+ +++n +g  ++vt i +i + G
  KHJ34173.1 222 DLEMNSISkaESVQSFNIFTDEYIDGTARLKLKASKFGSVKSLTIRIDNNLSGdlSKVTTIGKIDITG 289
                 6677777434477899954333444689********************98887677789999999988 PP

>> OST3_OST6  OST3 / OST6 family, transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.1   5.4e-09   1.6e-05      46     143 ..      28     122 ..      22     135 .. 0.86

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 5.4e-09
   OST3_OST6  46 CelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlllfppkkgpk..eskkkdtydfsrggfdaealakfisertgvkir 142
                 C +C+ + p fe+++  + ++     +++ Fak d+d++kdv q  g++  P + +++  ++ +  + ++ ++++++ g ++ e + + i++  +v+++
  KHJ34173.1  28 CGPCKAISPLFEKLSAPHSSS-----SSIKFAKCDVDKAKDVAQFCGISAMPTFHVYKDGTKVDeiKGADVQQLNVKIGYYTSEVMKNNIKKESDVSLK 121
                 9**************998888.....69*****************************9977666444448888888777779********999998876 PP

   OST3_OST6 143 i 143
                  
  KHJ34173.1 122 K 122
                 5 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   1.1e-06    0.0032       8      99 ..      19      91 ..      13      98 .. 0.75
   2 ?   -0.9   0.0      0.76   2.3e+03       9      60 ..     186     235 ..     182     260 .. 0.67

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 1.1e-06
  Thioredoxin_2  8 vlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPt.ivfldgkeivarlpGy 99
                   ++++f +++C+ Ck++   +++l++ ++       ++s++++  ++++a             +++a+  g++++Pt  v+ dg+ +v++++G+
     KHJ34173.1 19 LIIDFFATWCGPCKAISPLFEKLSAPHSS------SSSIKFAKCDVDKA-------------KDVAQFCGISAMPTfHVYKDGT-KVDEIKGA 91
                   7899**************99999333222......33333333333333.............5678**********66799999.99999997 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.76
  Thioredoxin_2   9 lvvftdpdCpyCkklkkelkelddvtvrvllfp..lkpsfepkavaiwcakekk 60 
                    ++++ + d+  C+  + e+ ++  +t++    +   +++ + ++ +i++a++++
     KHJ34173.1 186 IYIIKMKDSISCAPSRIEVGSNVPITIC----KsdGDEKHDLEMNSISKAESVQ 235
                    6777788888888887777777666666....3334445556666666666663 PP

>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   3.3e-05     0.099      26      77 ..      17      68 ..       2      87 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.3e-05
                SEEEEEEESTST-CCHHHHHHHHHHCH.HHCCCTTEEEEEEESSSCHHHHHHH CS
    AhpC-TSA 26 kpvvlffypkdwcpvCttelpalakly.eefkergvevigvsvdspeshkkfi 77
                  +++ f+++ wc +C++  p ++kl  +   +  ++   + vd+ +++++f+
  KHJ34173.1 17 ALLIIDFFAT-WCGPCKAISPLFEKLSaPHSSSSSIKFAKCDVDKAKDVAQFC 68
                6899******.*************99834444677888888888888877775 PP

>> Thioredoxin_8  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   7.4e-05      0.22       4      31 ..      19      46 ..      16      99 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.4e-05
                   EEEEE--SSSHHHHHHHHHHHHHHHHHH CS
  Thioredoxin_8  4 vlLyfgaswcppckaftpklkelyeklk 31
                   +++ f+a+wc pcka+ p   +l+  ++
     KHJ34173.1 19 LIIDFFATWCGPCKAISPLFEKLSAPHS 46
                   6899**************9999876665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (293 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.44u 0.20s 00:00:00.64 Elapsed: 00:00:00.36
# Mc/sec: 2443.79
//
Query:       KHJ34174.1  [L=1149]
Description: putative peptidase m16 inactive domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-16   60.2   0.0    2.9e-14   53.5   0.0    2.6  2  Peptidase_M16_C  Peptidase M16 inactive domain
    2.1e-07   31.0   0.0    5.2e-07   29.7   0.0    1.6  1  Peptidase_M16    Insulinase (Peptidase family M16)
  ------ inclusion threshold ------
       0.49    9.5   7.1       0.78    8.8   7.1    1.3  1  Astro_capsid_p   Turkey astrovirus capsid protein
        1.5    9.6   4.0          3    8.7   0.0    2.7  2  Myf5             Myogenic determination factor 5


Domain annotation for each model (and alignments):
>> Peptidase_M16_C  Peptidase M16 inactive domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.5   0.0   6.6e-18   2.9e-14       2     175 ..     298     478 ..     298     485 .. 0.84
   2 ?    3.7   0.0     0.012        55     107     179 ..     940    1009 ..     918    1013 .. 0.70

  Alignments for each domain:
  == domain 1  score: 53.5 bits;  conditional E-value: 6.6e-18
                      H-HHHHHHHHHHHSSGGGEEEEEEESS-HHHHHHHHHHHHTTSTHHSH........CSGSCTSSSSSGGGSSEEEEEEEESSSSSEEEEEEEEE CS
  Peptidase_M16_C   2 ltredlkefykkfYrpenmvlaivGdvdheelvkliekyfgdlkaska........ppakptgepltpatlkkppvvlkkldeeqahlslafeg 87 
                      lt e++++f+k++Y+p+n+ l++vG vd+ +l+++++++  ++ ++          +p   + +p++  +   ++v  +++de++  +++a+ g
       KHJ34174.1 298 LTPERIRSFHKEMYQPKNLCLVLVGEVDQVHLLEILDNFEESILSD-IippekkfkRPWIESAQPPPIKETIIETVSFPEEDESSGEVTIALFG 390
                      699********************************98777777744.345556666444444555555555666667777799*********** PP

                      ECTCTHTTHHHHHHHHHHHHSSTTSHHHHHHHTTTTSESEEEEEEEEESSCEEEEEEEEEECTTHHHHHHHHHHHHHHHHHHTS-HHH CS
  Peptidase_M16_C  88 pskendeddlalavlntlLgggmesrLytnlrekeglaysvsafndsyrdsglfgisatadpenveevvevilkelrklkkeglteee 175
                      p++ ++   +a++++ t+L g   s + + + eke l+ s+    ds  ++ +++++  + +e+++ v++ i++ ++++ ++ l+ + 
       KHJ34174.1 391 PDYGDEISFAAIDLILTYLVGSSASTIQNVIVEKERLVSSITYNMDSRPNTVIWFVANGVATEKLALVEKRIFELIKEVYSNPLNMKY 478
                      ***555555678**********************************999******************************999888765 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.012
                       HSSTTSHHHHHHHTTTTSESEEEEEEEEESSCEEEEEEEEEECT...THHHHHHHHHHHHHHHHHHTS-HHHHHHH CS
  Peptidase_M16_C  107 gggmesrLytnlrekeglaysvsafndsyrdsglfgisatadpe...nveevvevilkelrklkkeglteeelera 179 
                       +++ e++L t++r  +glay++ +  d   + gl+ +s++  p+    ++ + + i ++l++ + + +++ +le a
       KHJ34174.1  940 LETVEGPLWTAIR-GKGLAYGAHFRCD---VDGLIQFSIYRSPDsyrAFQAAKAIIESYLNEST-T-IDKYALEGA 1009
                       4556899******.***********99...5678888888888833222223333333333322.2.566666665 PP

>> Peptidase_M16  Insulinase (Peptidase family M16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.7   0.0   1.2e-10   5.2e-07      31     121 ..     161     246 ..     156     270 .. 0.81

  Alignments for each domain:
  == domain 1  score: 29.7 bits;  conditional E-value: 1.2e-10
                    TTHHHHHHHHTTSBBSSSCHHHHHHHHHHTT.CEEEEEEESSEEEEEEEEEGGG.HHHHHHHHHHHHHSBTTSHHHHHHHHHHHHHHHHHHCC CS
  Peptidase_M16  31 nGlAHllehmafkgTkkypsnklaeeleklG.gslnAttsrentvYyvevlskd.lekaldvladvfkaplleesevererkvvekeveavda 121
                    +G  H leh++f+g+k+y+ ++l   l++    + nA t +++t+Y+++++  d + ++l v  + ++ p+l++++  +       ev +vd 
     KHJ34174.1 161 SGSPHTLEHLVFMGSKNYKYKGLLDKLASRAySNTNAWTATDHTAYTLDTTGWDgFSQILPVYLEHVILPTLTDEACYT-------EVHHVDG 246
                    5788****************666655555550566**************998778********************9999.......6666654 PP

>> Astro_capsid_p  Turkey astrovirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   7.1   0.00017      0.78     205     282 ..    1079    1149 .]    1062    1149 .] 0.73

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00017
                      EEEEEESS--XXXX....XXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXX CS
  Astro_capsid_p  205 llfemkttvpqeralaegederktgaeeeisdpsdeedeevsdeetdtevesdeDeddevdrfDletsyeSeaeDddv 282 
                      ++    t ++ ++++    + +++g +  +++ +d e++   +e td e+es+eDed+   +f + +s eS+a D++v
      KHJ34174.1 1079 IVLTCATIMKDKNSK----SFEESGFKVRVQELKDFEETYGLEETTDDEDESEEDEDN--SDF-EASSTESNASDSEV 1149
                      455566666666553....333445679999999999988899999********9965..688.557779***99986 PP

>> Myf5  Myogenic determination factor 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0   0.00067         3      19      64 ..     792     838 ..     789     842 .. 0.86
   2 ?   -0.3   1.8      0.42   1.9e+03       7      22 ..    1132    1147 ..    1125    1149 .] 0.85

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00067
        Myf5  19 CSDgmadlnSPvsssressy.sssysselqnvssssksaavSSLdcL 64 
                   D+++ lnS +s + +++  +++y++ l++  +++ ++++SSL++L
  KHJ34174.1 792 SVDSIIHLNSKSSVKARNTLvKAVYMKRLKKLFHQEPKKVISSLENL 838
                 5699999999998887777647***********************99 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.42
        Myf5    7 ssdSeasSPrSnCSDg 22  
                  +sd easS +Sn SD+
  KHJ34174.1 1132 NSDFEASSTESNASDS 1147
                  7999***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       646  (0.036031); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.80u 0.29s 00:00:01.09 Elapsed: 00:00:00.45
# Mc/sec: 7706.68
//
Query:       KHJ34175.1  [L=1032]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-46  158.4   0.0    2.3e-45  154.9   0.0    2.2  1  SNF2_N      SNF2 family N-terminal domain
    7.3e-16   58.5   0.0    2.6e-15   56.7   0.0    2.0  2  Helicase_C  Helicase conserved C-terminal domain
    2.6e-07   30.8   0.5    1.4e-06   28.4   0.0    2.3  2  ResIII      Type III restriction enzyme, res subunit
    2.4e-06   27.3  12.6    2.4e-06   27.3  12.6    2.7  2  zf-C3HC4    Zinc finger, C3HC4 type (RING finger)
    0.00016   21.9  12.6    0.00016   21.9  12.6    3.2  3  zf-RING_2   Ring finger domain
    0.00025   20.0   0.1    0.00055   18.9   0.1    1.5  1  AAA_34      P-loop containing NTP hydrolase pore-1
    0.00043   20.1  10.4    0.00043   20.1  10.4    2.2  2  zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.9   0.0   8.9e-49   2.3e-45      48     349 ..     441     768 ..     432     769 .. 0.84

  Alignments for each domain:
  == domain 1  score: 154.9 bits;  conditional E-value: 8.9e-49
                 .HHHHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH------------ CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  48 saeakqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapkl 146
                 +a  k ++ GG+L DemG+GKT+q+++li+       ++++k       +p L++ P   l qW++ei++++ +  l+ +v +g +    k + + +  
  KHJ34175.1 441 KAMEKTKWGGGLLGDEMGMGKTIQAVSLIM------SDWPAK-------QPSLVLIPPVALLQWQQEINSYTDGT-LKTFVFHGTN---TKTKAITKSD 522
                 6678899***********************......567765.......9********99***********9887.9999999976...4445688999 PP

                 -----EEEE-HHHHHHHT.................TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTT CS
                 xxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 147 ladydvvittYdvlsreaelq...........kkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreep 234
                 l +ydv++++Y+ l+++   q           k++s +++++ +rv+lDE+h++k+  + aa a+  L+++++w+l+GTP+qn   ++++L+ fL ++p
  KHJ34175.1 523 LMKYDVILISYNSLESVYRKQekgfrrktgihKENSIIHEINFHRVILDEAHNIKSRSTGAARACFALKAKHKWCLSGTPLQNRIGEFFSLVRFLDIRP 621
                 9**************88766699********999***************************************************************** PP

                 T--HH.........HHHHHTHHHHH.................................HHHHHHHHHHHTT-STTEE---GGGT..--S---EEEEEEE CS
                 xxxxx.........xxxxxxxxxxx.................................xxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxx RF
      SNF2_N 235 fgekq.........tfdkllqrpie.................................aqaekgrsrLlqllqrlmlrrakkdv..eknlPpkteeiif 289
                 f  +           ++       +                                     k  ++L+ l  r+mlrr+k+d     +lP k+ +i +
  KHJ34175.1 622 FICYLckqcpcsilNWNM------NkdhrcnccghsgmqhisvfnyellnpiqkygnsGLGAKAFQKLRLLTDRFMLRRIKRDYttAMELPAKEIHINR 714
                 975322234453222222......24445779***999999999999999999999988899999999999999*********976678********99 PP

                 EE--HHHHHHHH....................HHHHHH-HH.H-HHHHHHHHHHHHH---X CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxx RF
      SNF2_N 290 lklskverksYnrllevlrkkalakllkrseaalksssksk.ekilelllelrqacnhpql 349
                   + ++e  +   +++  + k+   + +     l     ++ ++i++l+l+ rq+  hp+l
  KHJ34175.1 715 QFFGEEENDFASSIMNNGTRKFETYVAQGV---LL----NNyANIFGLILQMRQVADHPDL 768
                 999999998888666655555555555443...22....2225699999999999999987 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       6.4   1.6e+04      41      75 ..     503     535 ..     490     538 .. 0.65
   2 !   56.7   0.0     1e-18   2.6e-15       3     111 .]     862     975 ..     860     975 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 6.4
                 STEEEESTTSTHHHHHHHHHHHHTTSSS.EEEESGG CS
  Helicase_C  41 ikvavlhgelpqnereeileqfnkgesd.vLiatdv 75 
                 +k+ v+hg   +n + +++++    ++d +Li+ + 
  KHJ34175.1 503 LKTFVFHG---TNTKTKAITKSDLMKYDvILISYNS 535
                 56666777...5566666666666678877777665 PP

  == domain 2  score: 56.7 bits;  conditional E-value: 1e-18
                 HHHHHHHH...HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSS CS
  Helicase_C   3 leallell...kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlprn 96 
                 +e+l+++l    +++  +k++if++++++l+ v++ l++ gi++++l+g+++ ++r+++++ f  + ++  +L++ ++++  +++++++ V+++d+++n
  KHJ34175.1 862 IETLVHELyklRSKNMSHKSIIFSQFTTMLQLVEWRLRRAGISTVMLDGSMTPSQRQASINHFMtDVNVEcFLVSLKAGGVALNLTEASKVFIVDPWWN 960
                 55555555555789999*************8888889999***********************86566778**************************** PP

                 HHHHHHHHTTSSSTT CS
  Helicase_C  97 vtsyiqriGRtgRag 111
                 ++  +q+++R++R+g
  KHJ34175.1 961 PAAEWQSADRCHRIG 975
                 *************97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1      0.57   1.5e+03     121     164 ..     124     177 ..      71     178 .. 0.74
   2 !   28.4   0.0   5.5e-10   1.4e-06      17     169 ..     441     602 ..     425     604 .. 0.71

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.57
                 ...........HHHTTT-SEEEEET..GGGTTS.T...TTHHHHHT---SEEEE CS
      ResIII 121 e.....eeeseellrdrfdviiiDE..aHrlgakk...swreilekfkeavllg 164
                 e     +++s+ ++++r+ v+  DE  aH ++  k   +  ei +k+k++v+++
  KHJ34175.1 124 EknvsvRRNSNNNSKKRKRVLESDEdtAHESSWRKqnhEASEITDKCKKKVRVE 177
                 144455677788888888888888877888887744447777888888888775 PP

  == domain 2  score: 28.4 bits;  conditional E-value: 5.5e-10
                 ......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG.......GEEEESSS-B--.......-SEEEEEHH CS
      ResIII  17 eklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseayke...igkkvsgdkkkakekdstnkkilvttiq 112
                 +++++++   gl+  + G+GKT+ a++li + + +++    l+l+p  +ll q+++e++++++ + k    +g++++ +    +++d  + ++++++++
  KHJ34175.1 441 KAMEKTKWGGGLLGDEMGMGKTIQAVSLIMSDWPAKQ--PSLVLIPPVALL-QWQQEINSYTDGTLKTfvfHGTNTKTKAI--TKSDLMKYDVILISYN 534
                 44444555678888899**********9999888755..99*******998.89999999999887665433333333333..5699************ PP

                 HHHHTH..................HHHTTT-SEEEEETGGGTTS.T.TTHHHHHT---SEEEEEESS- CS
      ResIII 113 sldadseee..........eeeseellrdrfdviiiDEaHrlgakk.swreilekfkeavllglTATp 169
                 sl +  +++           +e+    + +f  +i DEaH++++ +    ++  ++k++ +  l++Tp
  KHJ34175.1 535 SLESVYRKQekgfrrktgiHKENSIIHEINFHRVILDEAHNIKSRStGAARACFALKAKHKWCLSGTP 602
                 ****99888867776655544444444445559*********99744333344445666666677776 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -12.9  13.6         7   1.8e+04      21      41 .]     626     648 ..     624     648 .. 0.64
   2 !   27.3  12.6   9.2e-10   2.4e-06       1      41 []     783     822 ..     783     822 .. 0.98

  Alignments for each domain:
  == domain 1  score: -12.9 bits;  conditional E-value: 7
                 B-CHHHHHHHHC..TSSB--TTT CS
    zf-C3HC4  21 fCskCirkilks..rkkvkCPlC 41 
                 +C++C  +il+   +k   C  C
  KHJ34175.1 626 LCKQCPCSILNWnmNKDHRCNCC 648
                 68888666666543666668777 PP

  == domain 2  score: 27.3 bits;  conditional E-value: 9.2e-10
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 C iC e+a+e+   + C+H fC++C +++++s+++  CP+C
  KHJ34175.1 783 CCICDEVAEEAI-RSACRHDFCRECAKNYVRSSENPDCPQC 822
                 ************.******************999999**** PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.5   9.5         7   1.8e+04      26      43 ..     627     648 ..     619     655 .. 0.59
   2 !   21.9  12.6   6.2e-08   0.00016       3      43 ..     783     822 ..     781     823 .. 0.84
   3 ?   -1.2   0.6       1.1   2.8e+03      11      34 ..     966     991 ..     962     995 .. 0.60

  Alignments for each domain:
  == domain 1  score: -7.5 bits;  conditional E-value: 7
   zf-RING_2  26 hreC...lerwlrssst.CPlC 43 
                 +++C   + +w+ ++ + C +C
  KHJ34175.1 627 CKQCpcsILNWNMNKDHrCNCC 648
                 4444334566743333347766 PP

  == domain 2  score: 21.9 bits;  conditional E-value: 6.2e-08
   zf-RING_2   3 CpICleelssadsvlllpCgHvfhreClerwlrssst..CPlC 43 
                 C+IC +e+  a+++++  C+H f+reC+++++rss++  CP C
  KHJ34175.1 783 CCIC-DEV--AEEAIRSACRHDFCRECAKNYVRSSENpdCPQC 822
                 ****.677..35555556****************999****** PP

  == domain 3  score: -1.2 bits;  conditional E-value: 1.1
   zf-RING_2  11 ssadsvlll.pCgHv.fhreClerwl 34 
                 +sad++++  +C+ + + r C+e+ +
  KHJ34175.1 966 QSADRCHRIgQCRPCsITRLCIEDSV 991
                 55666664436666657777777655 PP

>> AAA_34  P-loop containing NTP hydrolase pore-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.1   2.2e-07   0.00055      52     191 ..     440     583 ..     413     609 .. 0.71

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 2.2e-07
      AAA_34  52 eellpdgkRaGfllGDgaGvGkgrqiagiilenllqgrkkavwvsvsedLkeDaerDlkdigaseievvalnklkegkkikeseelkeGvlFvtYstli 150
                  + ++++k  G llGD++G+Gk+ q  ++i++ + +++   v +   + L+   e +    g+ ++ v++  ++k++ +i++s+ +k  v+++ Y++l 
  KHJ34175.1 440 MKAMEKTKWGGGLLGDEMGMGKTIQAVSLIMSDWPAKQPSLVLIPPVALLQWQQEINSYTDGTLKTFVFHGTNTKTK-AITKSDLMKYDVILISYNSLE 537
                 455666777899************************99999999999988865554433334444555555555444.66688889999*********9 PP

      AAA_34 151 seskkkk........ksrleqlveWlgedfdGvivfDEchkaknlakse 191
                 s  +k++          + + +++ ++  f   +++DE+h++k+  + +
  KHJ34175.1 538 SVYRKQEkgfrrktgIHKENSIIHEIN--FH-RVILDEAHNIKSRSTGA 583
                 998886556666333333344444444..44.6889******9987644 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.5   5.3         7   1.8e+04      14      18 ..     644     648 ..     626     652 .. 0.48
   2 !   20.1  10.4   1.7e-07   0.00043       2      40 .]     783     822 ..     782     822 .. 0.90

  Alignments for each domain:
  == domain 1  score: -7.5 bits;  conditional E-value: 7
  zf-C3HC4_2  14 vvtpC 18 
                 + + C
  KHJ34175.1 644 RCNCC 648
                 33344 PP

  == domain 2  score: 20.1 bits;  conditional E-value: 1.7e-07
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLeekn..eCPlC 40 
                 C iC ++ +++    +C H fC++C + + ++++   CP+C
  KHJ34175.1 783 CCICDEVAEEA-IRSACRHDFCRECAKNYVRSSEnpDCPQC 822
                 **********8.7789************88876558***** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1032 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1335  (0.0744604); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.80u 0.27s 00:00:01.07 Elapsed: 00:00:00.45
# Mc/sec: 6817.46
//
Query:       KHJ34176.1  [L=646]
Description: hypothetical protein EV44_g3800 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-07   31.1   2.8      2e-07   30.8   0.1    2.6  3  gag_pre-integrs  GAG-pre-integrase domain
     0.0001   22.2   1.7    0.00026   20.9   1.7    1.8  1  zf-CCHC          Zinc knuckle
     0.0012   19.3   0.5     0.0054   17.1   0.5    2.2  1  eIF3g            Eukaryotic translation initiation factor 3 s


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.34   2.1e+03      18      29 ..      66      77 ..      48      98 .. 0.74
   2 !   30.8   0.1   3.3e-11     2e-07      22      67 .]     447     494 ..     407     494 .. 0.81
   3 ?   -3.1   0.0       1.3   7.5e+03      20      35 ..     506     521 ..     499     526 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.34
  gag_pre-integrs 18 sknkssinlWHr 29
                     ++ k++++ WH+
       KHJ34176.1 66 QAVKDKARKWHN 77
                     446999999997 PP

  == domain 2  score: 30.8 bits;  conditional E-value: 3.3e-11
  gag_pre-integrs  22 ssinlWHrRLGHpsfsrlkkLfkkgl...lpglkisksevCeaCqlgKq 67 
                        +  WHrRL+Hps +rlk  +k+ +   l++ +  ks  CeaC +gK+
       KHJ34176.1 447 RRLIHWHRRLCHPSADRLKWTIKDTIdidLDPSD-VKSLPCEACDMGKS 494
                      55778******************99976667755.56888*******96 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 1.3
  gag_pre-integrs  20 nkssinlWHrRLGHps 35 
                      +++  + WH+  G +s
       KHJ34176.1 506 MENVGEEWHCDVGSLS 521
                      5677788999777665 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   1.7   4.3e-08   0.00026       2      18 .]     153     169 ..     152     169 .. 0.94

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 4.3e-08
                 CTSSSSSSSSTTTTSTS CS
     zf-CCHC   2 kCynCGepGHiardCpk 18 
                  C++C ++GH+a+ Cpk
  KHJ34176.1 153 RCWRCKSEGHFANKCPK 169
                 7***************7 PP

>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.5     9e-07    0.0054      69     124 ..     120     172 ..      83     173 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 9e-07
       eIF3g  69 ttvgeevelkleeekeeekeeeekekaklkkkekklvkCriCk.gdHfTskCPykdt 124
                   v  + +++  ++    k++++ + ++ k  + k ++C  Ck + Hf  kCP ++t
  KHJ34176.1 120 RRVLSNTQIEKDKSP---KKKQHGKGDAGK-GRGKRIRCWRCKsEGHFANKCPKRNT 172
                 444444444443333...222233333333.35667******889********9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (646 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       661  (0.0368676); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 4582.48
//
Query:       KHJ34177.1  [L=265]
Description: putative short chain dehydrogenase reductase family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.9e-64  215.8   1.3    6.8e-64  215.6   1.3    1.0  1  adh_short_C2    Enoyl-(Acyl carrier protein) reductase
    4.3e-43  147.1   1.7      5e-43  146.8   1.7    1.0  1  adh_short       short chain dehydrogenase
    2.3e-14   53.7   0.8    3.4e-14   53.1   0.8    1.2  1  KR              KR domain
  ------ inclusion threshold ------
       0.57   10.6   0.2       0.57   10.6   0.2    2.6  2  Periviscerokin  Periviscerokinin family


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.6   1.3   1.5e-67   6.8e-64       1     234 []      25     263 ..      25     263 .. 0.96

  Alignments for each domain:
  == domain 1  score: 215.6 bits;  conditional E-value: 1.5e-67
                   TTT..TSHHHHHHHHHHHTT-EEEEEESSGGH..HHHHHHHHHHTTSEE..EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH- CS
  adh_short_C2   1 Gaa..sgIGraiAkalaeeGaevvltdlneea..kkrveelaeelgaev..lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpflets 91 
                   Ga   +gIG ++A+ +ae Ga++++t++ +++  +k+veel++++g ++  ++c V + ++ve+lv++v ++fgk+D++v nag + k  + +l++s
    KHJ34177.1  25 GASgpRGIGIEAARGCAEMGADIAITYATRAEgaQKNVEELQSKYGVKAkaYKCLVGSYAEVENLVQTVIKDFGKIDGFVANAGQVAK--AGILDAS 119
                   777889************************99999***********77445*************************************..******* PP

                   HHHHHHHHHHHTHHHHHHHHHHHHHCTSC..CEEEEEEEGGGTSB.STTTT.HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTT CS
  adh_short_C2  92 reefdraldvnlyslfllakaalplmkeg..gsivnlssvgaerv.vpnyn.aygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikg 184
                    ++++++++++l+++f++aka+ +++ke+  gs+v ++s++++++ +p+ + ay++aKa++++++r+lA+e+ +   RvN+vspg+i+T +++ i+ 
    KHJ34177.1 120 VDDWNEVIQTDLNGVFHCAKAVGHHFKERktGSLVITASMSGHIAnFPQEQtAYNVAKAGCIHMARSLANEWRD-FARVNSVSPGYIDTGLSDFIS- 214
                   ************************9998889*********999997888889********************99.********************9. PP

                   HHHHHHHHHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTGG CS
  adh_short_C2 185 fdelleelearaplgrlgtpeevaeaalfLasdeasyitGqtlvvDgGlt 234
                    +++l+ ++ ++p+gr+++p+e   a ++L+sd+++y+tG+++v+DgG+t
    KHJ34177.1 215 -QDVLNLWKGMIPMGRTANPKELKGAFVYLLSDASTYTTGSDIVIDGGYT 263
                   .99**********************************************8 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.8   1.7   1.1e-46     5e-43       1     192 [.      19     215 ..      19     218 .. 0.95

  Alignments for each domain:
  == domain 1  score: 146.8 bits;  conditional E-value: 1.1e-46
                 SEEEEESTT..SHHHHHHHHHHHHTT-EEEE.EESCHHHHHHHHHHHHHT.TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGG CS
   adh_short   1 kvvlvtGas..sGIGraiakelakeGakvvv.vdrseekleevakelkee.gakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfse 95 
                 kvv++tGas  +GIG + a+ +a++Ga++++ ++ ++e +++ ++el+++ g ka a+++ v +++eve+lv++++k++gk+d +v+NAG   ++ + +
  KHJ34177.1  19 KVVVITGASgpRGIGIEAARGCAEMGADIAItYATRAEGAQKNVEELQSKyGVKAKAYKCLVGSYAEVENLVQTVIKDFGKIDGFVANAGQVAKAGILD 117
                 89*****99667*******************9******************************************************************* PP

                 CSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-..TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHHHCT CS
   adh_short  96 lseeewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpv..agvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmakelre 192
                  s ++w++vi++ l+gvf++++av  ++++++ G+ v ++S+ g+ ++   +++aY  +Ka+ ++++rsla+e+++   rvn+v PG++dT++   +++
  KHJ34177.1 118 ASVDDWNEVIQTDLNGVFHCAKAVGHHFKERKTGSLVITASMSGHIANfpQEQTAYNVAKAGCIHMARSLANEWRDF-ARVNSVSPGYIDTGLSDFISQ 215
                 ********************************************8776225799**********************9.9************99877665 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.1   0.8   7.7e-18   3.4e-14       3     154 ..      21     178 ..      19     197 .. 0.86

  Alignments for each domain:
  == domain 1  score: 53.1 bits;  conditional E-value: 7.7e-18
                 EEEETTTS..HHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT.T-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TT CS
          KR   3 ylitGGlG..gLGlelarwlaekgarhlvllsRsaaadedskaliaeleal.gaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklle 98 
                 ++itG+ G  g+G e ar  ae ga   +  + +    e ++++++el+++ g++ +++++ v + ++ve+l++++ +++++i G +  Ag ++++ + 
  KHJ34177.1  21 VVITGASGprGIGIEAARGCAEMGADIAITYATR---AEGAQKNVEELQSKyGVKAKAYKCLVGSYAEVENLVQTVIKDFGKIDGFVANAGQVAKAGIL 116
                 799**998779*************8866666666...35667789***9988*********************************************** PP

                 T--HHHHHHHHTTTTHHHHHHHHHTTT....S--SEEEEEEEHHHHH--T..T-HHHHHHHH CS
          KR  99 emtaedleqvlapKvkGawnLhelled....esldffvlfSSiagllgsa..gqanYaaaNa 154
                 + + +d+++v++  ++G+ +  +++ +    ++   +v+++S++g + ++  +q++Y  a a
  KHJ34177.1 117 DASVDDWNEVIQTDLNGVFHCAKAVGHhfkeRKTGSLVITASMSGHIANFpqEQTAYNVAKA 178
                 *****************988777655444449*************99986226778888765 PP

>> Periviscerokin  Periviscerokinin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   1.5       2.9   1.3e+04       5       9 ..       1       5 [.       1       5 [. 0.90
   2 ?   10.6   0.2   0.00013      0.57       4      11 .]     223     230 ..     222     230 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2.9
  Periviscerokin 5 LIpfP 9
                   +Ip P
      KHJ34177.1 1 MIPIP 5
                   9**98 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00013
  Periviscerokin   4 GLIpfPRv 11 
                     G+Ip++R+
      KHJ34177.1 223 GMIPMGRT 230
                     9******8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       625  (0.0348597); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2046.77
//
Query:       KHJ34178.1  [L=357]
Description: hypothetical protein EV44_g2557 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      260  (0.0145016); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.19s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 2914.37
//
Query:       KHJ34179.1  [L=458]
Description: putative n-formyltyrosine oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-66  223.0   0.1    7.7e-66  222.7   0.1    1.0  1  p450      Cytochrome P450


Domain annotation for each model (and alignments):
>> p450  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.7   0.1   4.3e-70   7.7e-66      22     461 ..      16     451 ..       4     453 .. 0.85

  Alignments for each domain:
  == domain 1  score: 222.7 bits;  conditional E-value: 4.3e-70
                 HHHHHHHHHHHH-SEEEEEETTEEEEEEESHHHHHHHHCTSTTTTCEESSHHHHHHHHHTTTTSSSTTCGHHHHHHHHHHHHHHHTSHSTTTHHHHHHH CS
        p450  22 lhevlrklqkkygpifrlklgskpvvvlsgpeavkevlikkgeefsgrpdeallatsrkpfkgkgvlfangekwkklRrfltptltsfgklsleelvee 120
                    +lr+l++kyg+i+r+ +++ +++   + +a   ++++++ +  g+  + + + +++ ++ +++l++n e +++ Rr+  p + ++ + + e+++++
  KHJ34179.1  16 SVYHLRDLHQKYGNIVRVNPNELSII---DDQAWTDIYGHRTPAGTGDLPKDFKQMRPEDNNIQNILNSNDENHRRFRRIQAPLFSDKAISAQEPFITD 111
                 344489************99987665...55699*******988888888888999999*****************************6669******* PP

                 HHHHHHHHHHCCCCHCS.EEETHHHHHHHHHHHHHHHHHSSHHHTTTSSHHHHHHHHHHHHHHHHHCHHHHCCCCCH..HHTCCSCHHHHHHHHHHHHH CS
        p450 121 eaedlveklrkkagess.elditellskaaldvigsilFgarfdlledeklselvkaveelssllskssvqllllfp..llkylptkllrklkeavkkl 216
                 +++ lv +l+kka++ss ++d+  + +  ++d++g+++F ++f++l++  l   v+ +  +++ +s+ +   +  fp  l k l + + + ++  ++++
  KHJ34179.1 112 YVKLLVSQLQKKANSSSnVVDLMLWYTFTTFDILGELAFRESFNCLQSGTLDFWVENTLLMFKDMSN-W-SAFEKFPwpLSKLLYQMTPKNIRGSRRER 208
                 *****************9*******************************754444444444444422.2.33333333355555555555566666666 PP

                 HHHHHHHHHHHHHCHCHCSCSSCSHHHHHHHHCTTCTCTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHCCTTTT-HH CS
        p450 217 kdlldklieerretldsakksrrdfldalllakkekkgesklsdeelaatvlellfaGvdTtsstlswaLyeLaknPevqeklreEidevlgdkrepty 315
                   l++++++ r +  +++  ++ df+  +l+ +    ge+ +s+ e+ a++  l++aG++Tt++ ls   ++L++n ++ e l++ i+++++  + +t 
  KHJ34179.1 209 TILTNNKVHSRIQRDSTK--EKSDFMTQILKYD----GEKGMSKSEIEANARILIVAGSETTATLLSGLTFFLLTNRKHLENLTKLIRTTFQTPDDITA 301
                 666666666665555555..9*********996....5558**************************************************99999*** PP

                 HHCCT-HHHHHHHHHHHHHSCSSTTEEEEESSS.CEEETTEEE-TT-EEEEEHHHHHT-TTTSSSTTS--GGGGB-TTS.....CTESSCTT--TTEEG CS
        p450 316 ddlqklpyldavikEtLRlhpvvplllpRevtk.dvvirgylipkGtevivnlyalhrdpevfpnPeeFdpeRFldekg.....nskrksfaflPFGaG 408
                   l k+ yl  +i E++Rl+p+vpl+l R++tk    i g +ip++t+v ++     r+p+++ +PeeF peR+ +++      ++        PF+ G
  KHJ34179.1 302 LALYKIDYLSCIIDESFRLYPPVPLSLRRVTTKgGSFICGNVIPENTTVGIPNFVAYRSPNHWTDPEEFVPERWYKDERcparyRT-DRRKILQPFSYG 399
                 *********************************7788899*************************************999998533.6677899***** PP

                 GGS-TTHHHHHHHHHHHHHHHHHHEEEEESTSTSGGEEESSCSSEEESSSSEE CS
        p450 409 pRnCiGerlArmelklflatlLqnFevelqpetdpppileksglllppkpikl 461
                 pRnCiG+++A+ e++l++a++L nF++el + ++ + i++k   l+ ++p+ +
  KHJ34179.1 400 PRNCIGKNMATAEMRLIIAHVLWNFDMEL-ELDSLNWIDQKVYALWEKNPLNV 451
                 ****************************8.88888888887666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       488  (0.0272185); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3294.98
//
Query:       KHJ34180.1  [L=629]
Description: putative vhs domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-44  150.8   0.0    7.4e-44  149.0   0.0    1.8  2  VHS              VHS domain
    2.1e-22   79.5   0.0    4.9e-22   78.3   0.0    1.6  1  Alpha_adaptinC2  Adaptin C-terminal domain
    1.2e-19   70.4   1.1    2.5e-19   69.3   0.2    2.1  2  GAT              GAT domain
    4.3e-08   32.6   0.1    1.2e-06   28.0   0.0    2.6  2  GGA_N-GAT        GGA N-GAT domain
  ------ inclusion threshold ------
       0.67   10.2   6.0       0.15   12.3   0.3    2.6  2  AP3B1_C          Clathrin-adaptor complex-3 beta-1 subunit C-


Domain annotation for each model (and alignments):
>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.0   0.0   2.1e-47   7.4e-44       5     141 .]      23     164 ..      20     164 .. 0.98
   2 ?   -2.0   0.0       0.8   2.9e+03       9      38 ..     284     314 ..     279     318 .. 0.76

  Alignments for each domain:
  == domain 1  score: 149.0 bits;  conditional E-value: 2.1e-47
                 HHHHHHHHHHT-TT-SS--HHHHHHHHHHHHCS.TCHHHHHHHHHHHHHT-SSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHCTTTCH CS
         VHS   5 sslekliekATdeslreedlslileicDlinek.eagpkeavrlikkkinsknphvallaLklldalvkNcGskfhleiaskeflnelvklilekknsk 102
                 s+l+++i++A++  + e++l+l+lei+Dlin+k ++ p+ea+ +i   in++np+v+llaL lld++vkNcG++f l+i+ keflnelv++++e+++ +
  KHJ34180.1  23 STLQRYIKQACSLENFEPNLALNLEIADLINSKkGNAPREAAMTIVNYINHRNPNVSLLALDLLDICVKNCGYPFQLQISMKEFLNELVRRFPERPPLR 121
                 6799*****************************9***************************************************************** PP

                 CS.HHHHHHHHHHHHHHHT....TT-TTGHHHHHHHHHHHHTT CS
         VHS 103 lakvkkkvlelleeWadaf....knkpelkkisdvykllkrkg 141
                 +++v+ k+le++eeW+ ++    ++k++l +i+d+++ll++kg
  KHJ34180.1 122 PTRVQLKILEAIEEWRGTIcqtsRYKDDLGYIRDMHRLLSYKG 164
                 ****************************************997 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.8
                 HHHHHHT-TT-SS-.-HHHHHHHHHHHHCST CS
         VHS   9 kliekATdeslree.dlslileicDlineke 38 
                  +i+k ++e  ++    +   ei D in + 
  KHJ34180.1 284 PKIQKMCEEESDDHeAVAKLFEINDSINRTV 314
                 5799999988887736777889999999874 PP

>> Alpha_adaptinC2  Adaptin C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.3   0.0   1.4e-25   4.9e-22       8     109 ..     519     625 ..     514     627 .. 0.94

  Alignments for each domain:
  == domain 1  score: 78.3 bits;  conditional E-value: 1.4e-25
                      ETTEEEEEEEEE.TTSTTEEEEEEEEEE-SSS-EEEEEEEEEEBTTCEEEEEEES-S-B-TTCEEEEEEEEEEES...CTTS-EEEEEEEEEEC CS
  Alpha_adaptinC2   8 kddlqIgfkfek.perpgqiritlsftNkssqpisnfsfqaavpkslklqlqppsstvlppnpggqitqvllien...pskkplrmrlrisykv 97 
                      +++l I++++++ p ++++i+i lsf+N++s+ i++++f aav+k+ +l+lqp+s+++l+p +++ +tqv+++ +    ++ ++r+r++ sy+v
       KHJ34180.1 519 QTALTISLHATRlPYSQNEITISLSFSNTTSEAITELTFMAAVTKGHHLKLQPQSGRTLQPREQNGVTQVITLMGaeqGKGDAVRLRWKASYRV 612
                      6789*********************************************************************9988878899**********7 PP

                      TC.EEEEEEEEEE CS
  Alpha_adaptinC2  98 gq.aikeqidvlk 109
                      g  +++eq++v  
       KHJ34180.1 613 GArPVSEQGEVAS 625
                      777******9975 PP

>> GAT  GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1         3   1.1e+04      38      45 ..     200     207 ..     182     217 .. 0.56
   2 !   69.3   0.2     7e-23   2.5e-19       1      77 []     247     323 ..     247     323 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 3
         GAT  38 priqklie 45 
                  ++q+li 
  KHJ34180.1 200 AKLQELIR 207
                 24555554 PP

  == domain 2  score: 69.3 bits;  conditional E-value: 7e-23
         GAT   1 rnnaklLsemLsstepdeellenellkeLyetckamqpriqklieetadeedllaelLqlNDeLnnvlerYerlkkg 77 
                 +++aklL+e L+s++p++++ e+++++eL+ ++++++p+iqk++ee +d+++++a+l ++ND++n+++erY+ +kkg
  KHJ34180.1 247 QQKAKLLEERLESFKPGDTMTEGDVFDELAAALQSAHPKIQKMCEEESDDHEAVAKLFEINDSINRTVERYKLMKKG 323
                 689************9999*******************************************************997 PP

>> GGA_N-GAT  GGA N-GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0   3.3e-10   1.2e-06       3      33 ..     195     225 ..     194     229 .. 0.91
   2 ?    1.3   0.0     0.073   2.6e+02       5      21 ..     248     264 ..     246     267 .. 0.89

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 3.3e-10
   GGA_N-GAT   3 deeksklLarLLkSknpeDLqaANrLIKsmV 33 
                 ++ +s +L++L++ + peDLq+ANrL K m 
  KHJ34180.1 195 RAAQSAKLQELIRRGGPEDLQEANRLMKIMA 225
                 66799***********************996 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.073
   GGA_N-GAT   5 eksklLarLLkSknpeD 21 
                 +k+klL++ L S +p D
  KHJ34180.1 248 QKAKLLEERLESFKPGD 264
                 79************998 PP

>> AP3B1_C  Clathrin-adaptor complex-3 beta-1 subunit C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   1.2      0.42   1.5e+03       6       6 ..     379     379 ..     344     446 .. 0.51
   2 ?   12.3   0.3   4.3e-05      0.15      66     127 ..     516     574 ..     457     590 .. 0.66

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.42
     AP3B1_C   6 l 6  
                 +
  KHJ34180.1 379 S 379
                 1 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 4.3e-05
     AP3B1_C  66 kvtGegLsveyrFtRqpslyspkmvsveltltNtsdseiknihigekklqagmeihefaeie 127
                 k++   L ++ + tR p  ys++ +++ l ++Nt+++ i+++ +    + +g++++  ++  
  KHJ34180.1 516 KISQTALTISLHATRLP--YSQNEITISLSFSNTTSEAITELTFMAA-VTKGHHLKLQPQSG 574
                 67777888888888876..899*********************9987.68888887766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (629 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       849  (0.0473534); expected 358.6 (0.02)
Passed bias filter:                      605  (0.0337442); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.61u 0.24s 00:00:00.85 Elapsed: 00:00:00.39
# Mc/sec: 4832.71
//
Query:       KHJ34181.1  [L=706]
Description: hypothetical protein EV44_g4868 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-47  162.5  10.0    1.1e-47  162.5  10.0    3.0  3  HAUS6_N   HAUS augmin-like complex subunit 6 N-terminus


Domain annotation for each model (and alignments):
>> HAUS6_N  HAUS augmin-like complex subunit 6 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.5  10.0   6.4e-52   1.1e-47       1     220 [.      37     266 ..      37     274 .. 0.94
   2 ?   -1.3   0.9     0.072   1.3e+03     186     201 ..     414     429 ..     318     490 .. 0.65
   3 !    2.4   2.3    0.0057     1e+02     111     192 ..     572     664 ..     568     698 .. 0.51

  Alignments for each domain:
  == domain 1  score: 162.5 bits;  conditional E-value: 6.4e-52
     HAUS6_N   1 lltnLllLgldplpd.pdksritfse.dmfdk.pnk.kafeivlyfLFnklDpeeakkkFrpcwPplDkkqeaeFRkalvewLkeikeegklgrlpkvv 95 
                 ++tnL+lL+ld ++d p+++ +tfs+ + +++ + + ++ e++ly+LF++lDpe a  k++p++Ppl+  q+ ++R+al+++L+++k++g+ +++  ++
  KHJ34181.1  37 FITNLKLLSLDLQEDwPNITAQTFSTkNGQQNqRHRiRCAEWALYQLFTILDPEVACTKLQPFFPPLEPLQSLNLRSALLRCLDQAKKNGVISQDIMLR 135
                 79************************98999955559************************************************************** PP

     HAUS6_N  96 stlllspgGekfielLlsfssfVlkkvlkeksk........klalevreaaskkaqdlsklvaahrvslrrflrekaaadrarqkyqenaqllekkere 186
                 +tll++++G+kf+elL+ fs++Vlkk+++ ++         +lale++ + ++    +s l++ah+vslr+ l ek++    r ky+++++ll+  e  
  KHJ34181.1 136 KTLLDECKGDKFEELLANFSHAVLKKTMSDRKGqkyeaialRLALENYSYKGEIM-LISSLILAHKVSLRQHLIEKNQL---RVKYRDFSELLSSIEHR 230
                 ***************************************9999999999999876.*********************99...***************** PP

     HAUS6_N 187 lraeleelqaelkaekeaakkekkeasedaeee..k 220
                 l++++e+l++++++++ +++++++e + ++e++   
  KHJ34181.1 231 LKKKKEQLNKKISMRALQNHDSEEEFQLHQERKkaS 266
                 *************99888889999998888877423 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.072
     HAUS6_N 186 elraeleelqaelkae 201
                 + r+++++l++++++e
  KHJ34181.1 414 SQREQIQKLNQRTELE 429
                 2222223333322222 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.0057
     HAUS6_N 111 LlsfssfVlkkvlkeksk.............klalevreaaskkaqdlsklvaahrvslrrflrekaaadrarqkyqenaqllekkerelraele 192
                 Lls +++ l + lk++ +             +l++e   +++   q +++++a +++++++ + + ++++ + +k q+++++l+k e++ +++ e
  KHJ34181.1 572 LLSMARMPLSQSLKTNDEtneidssivvkssNLEVESD-SFANLVQRTRNSMAGFEAAQKKAQLDRRRSV-KEEKKQRKVSHLQKVEEKKTTRFE 664
                 66777777777777777755554444333222222221.1122222333333333333333333333332.344444444444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (706 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1715  (0.0956551); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.41
# Mc/sec: 5124.06
//
Query:       KHJ34182.1  [L=391]
Description: putative rli and duf367 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.3e-52  174.1   0.0    1.4e-51  173.5   0.0    1.3  1  Ribo_biogen_C  Ribosome biogenesis protein, C-terminal
    5.5e-11   42.1   0.8      1e-10   41.3   0.8    1.5  1  RLI            Possible Fer4-like domain in RNase L inhibitor


Domain annotation for each model (and alignments):
>> Ribo_biogen_C  Ribosome biogenesis protein, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.5   0.0   1.5e-55   1.4e-51       1     127 []      78     204 ..      78     204 .. 0.99

  Alignments for each domain:
  == domain 1  score: 173.5 bits;  conditional E-value: 1.5e-55
                    EEE-TT-SSB--GGGHHHHHHT-EEEE---TTT--GGGTTT-E....EB--S-B--STTTTT-BS---HHHHHHHHHHHTT-HHHHHHHHTSSTTH CS
  Ribo_biogen_C   1 ivlspkakkvlspaDreiveksgiavvdcsWarleevkfkklkakeerlLPyLvAaNpvnYgkplkLscvEAlaaalyilglkeeaeellskfkwg 96 
                    +v+sp+ak+v+spaDr+i+e+ g+avv+csWar++ev+++k+ +k+erlLPyLvAaN+vnYgkp++L+cvEAl aa+yi+g+ e+a e+ls+f++g
     KHJ34182.1  78 LVISPNAKEVISPADRQIMEQFGVAVVECSWARTKEVPWNKIGGKSERLLPYLVAANSVNYGKPWRLNCVEALGAAFYICGHPEWAAEILSHFSYG 173
                    699********************************************************************************************* PP

                    HHHHHHCHHHHHHH.TT--HHHHHHHHHHHH CS
  Ribo_biogen_C  97 eeFlelnkelleeYakckdseevvevqkeyl 127
                    e+Fl++n+++l++Ya+c+d+++v ++++++l
     KHJ34182.1 174 ETFLQINSSILKRYAACNDQADVRKTEEAWL 204
                    ***************************9986 PP

>> RLI  Possible Fer4-like domain in RNase L inhibitor, RLI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.3   0.8   1.1e-14     1e-10       2      35 .]      41      74 ..      40      74 .. 0.95

  Alignments for each domain:
  == domain 1  score: 41.3 bits;  conditional E-value: 1.1e-14
                -EEEES---------TTHHHHHTTSEEEESS--S CS
         RLI  2 rlAivdadqCdPKKCtgkkcarfcpvrlvrtgkk 35
                + A++d ++CdPK+C+gk++++++++r +++g+k
  KHJ34182.1 41 KAACWDLEHCDPKRCSGKRLMKLGLMRGLHIGQK 74
                679****************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       648  (0.0361426); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2893.21
//
Query:       KHJ34183.1  [L=602]
Description: putative chromatin assembly factor 1 subunit a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.8e-23   80.9   5.8    5.8e-23   80.9   5.8    3.2  3  CAF1A         Chromatin assembly factor 1 subunit A
  ------ inclusion threshold ------
       0.27   11.4   8.3        2.1    8.4   4.6    2.3  2  DDHD          DDHD domain
       0.29    9.6  16.6       0.48    8.9  16.6    1.3  1  Borrelia_P83  Borrelia P83/100 protein
       0.42   10.4  13.7       0.84    9.4  13.7    1.5  1  ATP11         ATP11 protein
       0.99    9.0  28.3        0.3   10.6  25.0    1.9  2  DDRGK         DDRGK domain
        1.8    7.4   6.6        3.4    6.5   6.6    1.4  1  PA26          PA26 p53-induced protein (sestrin)
        4.8    6.9  12.8       0.45   10.3   8.0    1.7  2  AAA_11        AAA domain
        6.6    7.0   9.6       0.46   10.7   3.3    2.3  3  DUF4230       Protein of unknown function (DUF4230)
        8.2    5.1  10.0         14    4.3  10.0    1.3  1  Presenilin    Presenilin


Domain annotation for each model (and alignments):
>> CAF1A  Chromatin assembly factor 1 subunit A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   2.9       2.5   4.9e+03      50      72 ..     104     126 ..      57     130 .. 0.69
   2 ?   -5.3   5.9         9   1.8e+04      53      68 ..     141     156 ..     121     165 .. 0.46
   3 !   80.9   5.8   2.9e-26   5.8e-23       1      72 [.     325     397 ..     325     410 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.5
       CAF1A  50 eeeeegedleseedeeeeeeddd 72 
                 e+e e e l +e + +++e d +
  KHJ34183.1 104 EKEREIERLRKEAERKKKEADRE 126
                 23446677766555555444443 PP

  == domain 2  score: -5.3 bits;  conditional E-value: 9
       CAF1A  53 eegedleseedeeeee 68 
                 e+  ++e+e+ ++eee
  KHJ34183.1 141 EKRRKVEEEKRKKEEE 156
                 2333444433333333 PP

  == domain 3  score: 80.9 bits;  conditional E-value: 2.9e-26
       CAF1A   1 KllqFyedvRPpYyGTwtkkskvvg....arnPfskdekeldYdyDSdaEWeeeeeeegedleseedeeeeeeddd 72 
                 K l+FyedvRPpY+GT++ ++ + g    arnP++kd +++dYdyDS+aEW e  +eegedl+s+++ee+ ++ +d
  KHJ34183.1 325 KSLKFYEDVRPPYIGTYSCRP-IHGiaklARNPLRKDLPNVDYDYDSEAEWLE--DEEGEDLQSDDEEEDIDDVED 397
                 88****************533.3334578**********************88..569*****9999888776655 PP

>> DDHD  DDHD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   4.6    0.0011       2.1      88     188 ..      88     201 ..      46     220 .. 0.65
   2 ?    4.1   0.1     0.022        44      59     129 ..     445     523 ..     444     582 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0011
        DDHD  88 lelkesltsigaalkqkvsglvsslsallnrslelaeeesaslaessksherasesskasqeskaaesstasssaksskaee...............kv 171
                 +e  +++ +++++ +++++  ++ l++  +r ++ a++e++++a + ++ +r+++++k ++e++++e++ +++++++ k                   +
  KHJ34183.1  88 HEETKGVGKLEEKARKEKEREIERLRKEAERKKKEADREEKRTAYEIEKLAREEKRRKVEEEKRKKEEERKKKERSQMK--LgsffaapfssktregLT 184
                 4566677777777777777777777666677777777777777777777777666666666655555544444443333..144777777766666644 PP

        DDHD 172 elekvralnwwgRiDYa 188
                 ++++  +ln+   iDY+
  KHJ34183.1 185 NMKAQSSLNPPSSIDYV 201
                 44446789999999997 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.022
        DDHD  59 yRlEPLlepkfsklkPvsiprykrrkllhlelkesltsigaalkqkvsglvssls.........allnrslelaeeesas 129
                 yR+E +l++++++++P s +++     +++   ++l+++++++++++     s s         a+ n++ + ++ + ++
  KHJ34183.1 445 YRIEFILDQEIKSIDPLSKSYWPSLV-ISDIKPNGLKNFCSKSQNHNGAHNPSASknedlmmltATTNQVCDSKQVNLKK 523
                 9*****************99999954.66777888999988888876655555553333332221222222222222222 PP

>> Borrelia_P83  Borrelia P83/100 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9  16.6   0.00024      0.48     262     332 ..      89     161 ..      69     222 .. 0.67

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00024
  Borrelia_P83 262 epadvsskkedkkvaeekkreiekaqkeikkkdeeakkakdakaedlkkeskaeek...eaedkeleakkeree 332
                   e+++  + k ++k  +ek reie+ +ke+++k++ea + + + a +++k +++e++   e e++++e +++++e
    KHJ34183.1  89 EETKGVG-KLEEKARKEKEREIERLRKEAERKKKEADREEKRTAYEIEKLAREEKRrkvEEEKRKKEEERKKKE 161
                   4443333.344555679999999999999999999999988888877777776666555323333333333333 PP

>> ATP11  ATP11 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4  13.7   0.00042      0.84       8      75 ..      95     162 ..      85     215 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00042
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXX-- CS
       ATP11   8 eKLeqkakeeglesieeLkeaykdkieekrkeaaaid......leesksesekekeakasssektekkesaaks 75 
                  KLe+ka++e  ++ie+L++++++k +e ++e+++++      +       e+++++ +++++k+e++++++++
  KHJ34183.1  95 GKLEEKARKEKEREIERLRKEAERKKKEADREEKRTAyeieklA------REEKRRKVEEEKRKKEEERKKKER 162
                 59********************8888888877755553433221......222222222222221111111111 PP

>> DDRGK  DDRGK domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6  25.0   0.00015       0.3       8      74 ..      94     164 ..      87     202 .. 0.68
   2 ?   -3.7   0.1       3.9   7.7e+03     100     120 ..     505     525 ..     489     532 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00015
                 XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       DDRGK   8 kkkleeKekkrqqreaeeeere.erkkleekreeerkek...eekeeekekkkeeeerkkeeekerkeqee 74 
                   kleeK +k ++re e+  +e erkk+e+ ree+r+     + ++eek++k eee+rkkeee+++ke  +
  KHJ34183.1  94 VGKLEEKARKEKEREIERLRKEaERKKKEADREEKRTAYeieKLAREEKRRKVEEEKRKKEEERKKKERSQ 164
                 569999*9999999999876662555555556555443333255566666666666666666666666544 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 3.9
                 HHHHHHHHHHH-SEE-HHHHH CS
       DDRGK 100 lleefinyikekKvvlleela 120
                 +l+  +n + ++K v+l+ l 
  KHJ34183.1 505 MLTATTNQVCDSKQVNLKKLK 525
                 666666777777777776664 PP

>> PA26  PA26 p53-induced protein (sestrin)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   6.6    0.0017       3.4     177     299 ..      64     187 ..      22     191 .. 0.61

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0017
        PA26 177 peldlesskklksasasan..ekedsseeeeeelerkaaaeaeaevealmermkklqeeedeeeeaseeelserfekeeseslllaaadaeeaavasdl 273
                  e+d  +++ lk+++  ++  +k +++++   +le+ka +e+e e+e l ++ ++ ++e+d+ee+ +  e ++   +e++++++  + ++ee+  +++ 
  KHJ34183.1  64 LEIDVLNQPPLKKTKLLEHdvKKYHEETKGVGKLEEKARKEKEREIERLRKEAERKKKEADREEKRTAYEIEKLAREEKRRKVEEEKRKKEEER-KKKE 161
                 3444444444444444344223444455556788889999999999****99999999999988766666666666667777766666444433.3333 PP

        PA26 274 sryvedpefgyqdFarrgeeeiptfr 299
                    ++  +f    F+++ +e ++ ++
  KHJ34183.1 162 RSQMKLGSFFAAPFSSKTREGLTNMK 187
                 44445555555566666555555555 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   8.0   0.00023      0.45     121     188 ..      79     164 ..      18     173 .. 0.72
   2 ?   -3.9   0.1       4.8   9.6e+03     172     172 ..     515     515 ..     475     545 .. 0.49

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00023
      AAA_11 121 e..................kaqlakeiskeleklakelrafeeeeekeklkkskekskskleqerrklkkerkelskeleeaeesl 188
                                    + +  ke+++e+e+l+ke++ +++e+ +e++++++e +k  +e++rrk+++e+++ ++e +++e+s 
  KHJ34183.1  79 LlehdvkkyheetkgvgklEEKARKEKEREIERLRKEAERKKKEADREEKRTAYEIEKLAREEKRRKVEEEKRKKEEERKKKERSQ 164
                 03333333334444666666677788888888888888888888888888888888888888888888888888877777777664 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 4.8
      AAA_11 172 k 172
                 +
  KHJ34183.1 515 D 515
                 1 PP

>> DUF4230  Protein of unknown function (DUF4230)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   3.3   0.00023      0.46      61     136 ..      60     139 ..      51     150 .. 0.79
   2 ?   -3.0   0.1         4   7.9e+03     100     130 ..     244     257 ..     237     266 .. 0.53
   3 ?   -2.2   0.0       2.3   4.5e+03      46      61 ..     519     534 ..     502     559 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00023
     DUF4230  61 d...iti.tLPppeilsvkldekrikvydekrgllnritdedeeellkeaeakikeeaeenglleqAeenakklleqllk 136
                 +   ++i  L +p + ++kl e+++k y+e++ +  ++++++++e ++e e+  ke+ +++   ++ e++++ ++e+l +
  KHJ34183.1  60 KssvLEIdVLNQPPLKKTKLLEHDVKKYHEETKGVGKLEEKARKEKEREIERLRKEAERKKKEADREEKRTAYEIEKLAR 139
                 33568888999999******************9****9999888888887776666555777788888888888888874 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 4
     DUF4230 100 eellkeaeakikeeaeenglleqAeenakkl 130
                 ++ lk+a+++i e                  
  KHJ34183.1 244 QKSLKQAQENIDE-----------------C 257
                 4445555555544.................3 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2.3
     DUF4230  46 vDLsklkeediqvsdd 61 
                 v+L+klk++ i ++++
  KHJ34183.1 519 VNLKKLKKKEILTNNP 534
                 5566666666555544 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3  10.0    0.0073        14     252     325 ..      96     168 ..      47     179 .. 0.44

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0073
  Presenilin 252 skeeeseeesseksaqsseseeeseeesseaessaeesseekeseessesseeeeeeeeeeeeseseergvkLG 325
                 + ee++++e+++++++ +++ e++++e+ ++e++++ + e+ ++ee++++ eee ++++eee++++e++ +kLG
  KHJ34183.1  96 KLEEKARKEKEREIERLRKEAERKKKEADREEKRTAYEIEKLAREEKRRKVEEE-KRKKEEERKKKERSQMKLG 168
                 111111222222222222222222222222222222222222222222222222.2222222233344567776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (602 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2414  (0.134642); expected 358.6 (0.02)
Passed bias filter:                      747  (0.0416643); expected 358.6 (0.02)
Passed Vit filter:                       165  (0.00920297); expected 17.9 (0.001)
Passed Fwd filter:                        31  (0.00172904); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.88u 0.35s 00:00:01.23 Elapsed: 00:00:00.48
# Mc/sec: 3756.77
//
Query:       KHJ34184.1  [L=186]
Description: hypothetical protein EV44_g3304 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       247  (0.0137766); expected 358.6 (0.02)
Passed bias filter:                      223  (0.0124379); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.21s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1354.10
//
Query:       KHJ34185.1  [L=748]
Description: putative kinesin family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.2e-78  263.5   0.9      5e-78  262.4   0.9    1.6  1  Kinesin      Kinesin motor domain
    3.4e-21   75.7   0.0    9.5e-21   74.3   0.0    1.7  1  Microtub_bd  Microtubule binding
     0.0024   18.4   0.1        1.1    9.9   0.0    2.8  2  HHH_5        Helix-hairpin-helix domain
     0.0076   16.5   0.0      0.022   15.0   0.0    1.7  1  HHH_3        Helix-hairpin-helix motif
  ------ inclusion threshold ------
      0.029   14.9   0.1      0.084   13.4   0.1    1.8  1  Eco57I       Eco57I restriction-modification methylase
      0.044   13.7   0.1        2.1    8.4   0.0    2.6  2  HHH          Helix-hairpin-helix motif


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  262.4   0.9   1.7e-81     5e-78       1     333 []       8     333 ..       8     333 .. 0.90

  Alignments for each domain:
  == domain 1  score: 262.4 bits;  conditional E-value: 1.7e-81
                 EE-SSSHHHHTTTTEBCEEEEC.TCTCEEEEEEEEECTTSCEEEEESEEEETTS-HHHHHHHHHHHHHHHHHTTSEEEEEEEESTTSSHHHHHTBC.TT CS
     Kinesin   1 RvRplnekekeeeeeeevevee.ekkeeekkskkenkeeeekkfkFdkvfdeeatqeevyeetakplvesvleGynatifaYGqtgsGKTyTmegk.ee 97 
                 R+Rpl  ke++ee     e ++ +k ++ ++  + +ke+ee +f+F++v+d +a+qe ++++ ++p ++s+++G   tifaYG+tg+GKT+Tm g  + 
  KHJ34185.1   8 RIRPLLGKETDEEVIVRAESNQeSKIQNVVRIPNPKKETEEFSFTFNAVYDANASQEALFTNEVAPNLKSLFRGLDLTIFAYGVTGTGKTHTMRGGmKL 106
                 99****9999888776666554144455566667778888899***************************************************98778 PP

                 TSBSHHHHHHHHHHHHHHHCTTTH..EEEEEEEEEEEEEETTEEEETTSTTTTSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTS CS
     Kinesin  98 eeeGiipraleelFesikkekeek..ekefsvkvsylEiYneeiyDLLeskkskkkkklkiredskkgevyvkgltevevksaeevlellekgeknrkv 194
                 +++G+ipr l+ ++++ +k ++++  e++++v++sy+EiYn+++yDL+e+ ++++   l +re++   +++v gl+e  +++++e+ +l  ++++nr++
  KHJ34185.1 107 ADRGVIPRLLSAIYRRGRKVTKDSggETTIEVSLSYYEIYNDKVYDLFEKPEKRTLAGLPLREKDG--KTVVVGLSEYACNDLKEFEKLYIEANHNRST 203
                 99*************9998877664467788899*****************888888999999776..58***************************** PP

                 TTSSCTSHHCCSEEEEEEEEEEEETTTTTCEEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTSTSCGGGSHHHHH CS
     Kinesin 195 aetklneeSSRSHavftitleqknlkeeteekvkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaekkkskhipYRdSkLTrl 293
                 a tkln++SSRSHa+++++++q + ++     + +s  + +DLAGsE  ++t++ ++er+ E+a+iNkSL++L+++i+a+ +   +k ipYR+S++Tr+
  KHJ34185.1 204 AGTKLNSQSSRSHAILQVKVSQITGDK-----KLVSLASAIDLAGSEDNRRTEN-NKERMIESASINKSLFVLSSCIDAIGRG--DKRIPYRESRMTRI 294
                 *********************988552.....36788999*************6.7999************************..************** PP

                 TGGGHS.SSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHCTT CS
     Kinesin 294 LqdsLg.Gnsktlmivtvspssenleetlstlkfaerakei 333
                 L   +g  +  t+mi+++ p ++   +tls+l+ ++rak+i
  KHJ34185.1 295 LS--IGqNQGITIMILNLAPLRSYHLDTLSSLNVSSRAKRI 333
                 *5..55156789***************************87 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.3   0.0   3.2e-24   9.5e-21      22     148 ..       3     153 ..       2     154 .. 0.82

  Alignments for each domain:
  == domain 1  score: 74.3 bits;  conditional E-value: 3.2e-24
                  -EEEEEEECCCS-T...........EEEETTT................TTTEEEE-SEEEECTTHCCCCC.CCCHHHHHHHHTT--EEEEEEES.... CS
  Microtub_bd  22 iRvfarvrpelesek..........akikfpe.............eekkkkkefsFdrvfeseseqeevf.eeisqlvqsaldgynvcifaygqTGsG 95 
                  +Rv ar+rp l +e+                +             ++++++ +f+F+ v++++++qe +f +e++  ++s ++g + +ifayg TG G
   KHJ34185.1   3 VRVVARIRPLLGKETdeevivraesN-----QeskiqnvvripnpKKETEEFSFTFNAVYDANASQEALFtNEVAPNLKSLFRGLDLTIFAYGVTGTG 95 
                  8*********9998778866443330.....144566677788788899999************777665379999********************** PP

                  ..............ST-HCHHHHHHHHHHCCTS...CCCCEEEEEEEEEEESS-EEET CS
  Microtub_bd  96 KtyTmeg..eeeeagmipraveeifetiselke...kgwkyeielqfveiynekvqDl 148
                  Kt+Tm g  + +++g+ipr++++i++  ++ ++    + + e++l++ eiyn+kv+Dl
   KHJ34185.1  96 KTHTMRGgmKLADRGVIPRLLSAIYRRGRKVTKdsgGETTIEVSLSYYEIYNDKVYDL 153
                  *******99999*************876554432226778889999***********9 PP

>> HHH_5  Helix-hairpin-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0   0.00038       1.1      31      55 ..     684     708 ..     675     710 .. 0.86
   2 !    5.4   0.0    0.0097        29      35      50 ..     723     738 ..     719     744 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00038
                 HS-HHHHHTSTTS-HHHHHHHHHHH CS
       HHH_5  31 aadveeLakipGiGkktAeriilel 55 
                 + d++ +  ++G+G+k+A+ +i+ l
  KHJ34185.1 684 SRDIAMIRGLHGVGEKKAKDLIEFL 708
                 4588999999************988 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0097
                 HHHHTSTTS-HHHHHH CS
       HHH_5  35 eeLakipGiGkktAer 50 
                 +eL ++pG+Gk+ +er
  KHJ34185.1 723 HELIAVPGLGKRSVER 738
                 6788999999999888 PP

>> HHH_3  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   7.2e-06     0.022       8      60 ..     682     739 ..     680     743 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 7.2e-06
       HHH_3   8 iNtAsaeeLqklpGlgpklAknIvayRe.....knGpfksreeLlkvkglgpktfeql 60 
                 iN+ + + ++ l+G+g+k+Ak ++++ e     + G ++++ eL  v+glg+  +e++
  KHJ34185.1 682 INSRDIAMIRGLHGVGEKKAKDLIEFLElqseqEGGSIRTLHELIAVPGLGKRSVERA 739
                 78888899999*************996433322779****************999986 PP

>> Eco57I  Eco57I restriction-modification methylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   2.8e-05     0.084       6      47 ..     590     634 ..     588     660 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.8e-05
      Eco57I   6 iiGNPPYqeseakkelkaleek....akdiyqkFvekalkledkyl 47 
                 ii  PPY es+++++ +  +e+    ++di+ +F+ +a++ +dky 
  KHJ34185.1 590 IITSPPYLESQKNNQES-FRENlpnnSNDIFDDFLLQADNEDDKYF 634
                 8999****999555544.222245559************9988886 PP

>> HHH  Helix-hairpin-helix motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0   0.00071       2.1       8      30 .]     685     707 ..     678     707 .. 0.82
   2 ?    2.5   0.0     0.053   1.6e+02       9      21 ..     721     733 ..     716     738 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00071
                 SSHHHHHTSTT-SHHHHHHHHHH CS
         HHH   8 asreeLlalPGVGpktAeaIlsy 30 
                 ++++ +  l GVG+k+A   +++
  KHJ34185.1 685 RDIAMIRGLHGVGEKKAKDLIEF 707
                 667778899********998775 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.053
                 SHHHHHTSTT-SH CS
         HHH   9 sreeLlalPGVGp 21 
                 ++ eL a+PG G+
  KHJ34185.1 721 TLHELIAVPGLGK 733
                 6679******996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (748 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       941  (0.0524848); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.67u 0.23s 00:00:00.90 Elapsed: 00:00:00.40
# Mc/sec: 5543.38
//
Query:       KHJ34186.1  [L=128]
Description: putative small nucleolar ribonucleoprotein snu13 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-25   88.6   0.2      2e-25   88.3   0.2    1.1  1  Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 famil
     0.0003   20.9   0.0    0.00046   20.3   0.0    1.3  1  RNase_P_pop3    RNase P subunit Pop3
     0.0025   17.6   0.0     0.0035   17.2   0.0    1.3  1  PELOTA_1        PELOTA RNA binding domain
  ------ inclusion threshold ------
      0.041   14.3   0.3       0.28   11.7   0.2    2.0  2  TetR_C_28       Tetracyclin repressor-like, C-terminal domain


Domain annotation for each model (and alignments):
>> Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.3   0.2   4.5e-29     2e-25       2      93 ..      21     112 ..      20     114 .. 0.96

  Alignments for each domain:
  == domain 1  score: 88.3 bits;  conditional E-value: 4.5e-29
                     HHHHHHHHHHHHTEEEESHHHHHHHHHTTTESEEEEETTSSSGGHHHHHHHHHHHTTEEEEEESCHHHHHHHTTSSSECSEEEEEESTTTHH CS
  Ribosomal_L7Ae   2 aieevlkkakkagklvlGlkevtkalergeaklvilAedvepeekkkllealckekevpyvkvkskkeLGelvgkkrpvsalaikdegdskd 93 
                     +i +++++a++ ++l++G++e+tk+l+rg a+++ilA+d+ p  +  +l+ lc++k+v y++v+sk +LG+++g +r+v+a++i+++++s+ 
      KHJ34186.1  21 EILDLVQQASHYRQLKKGANEATKTLNRGIAEIIILAADTAPLAILLHLPLLCEDKNVVYCYVPSKTALGRACGVSRAVIAASITTNEASDL 112
                     677899**********************************************************************************9975 PP

>> RNase_P_pop3  RNase P subunit Pop3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0     1e-07   0.00046      29     145 ..       9     117 ..       4     128 .] 0.62

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 1e-07
  RNase_P_pop3  29 lvleLlqekvlkklvrlleskeneeseltvglneivelLecsesddvvllvcnkDtPsvLlsqlpllvavanltvklvqlpksaqakldeklGlska 125
                     + + + +++++++ l + +  +  +l  g ne  + L+  + +++++l+ +   P+ +l +lpll++ +n    +v     ++  l  + G+s+a
    KHJ34186.1   9 AAWPIADASLAQEILDLVQ-QASHYRQLKKGANEATKTLN-RGIAEIIILAADTA-PLAILLHLPLLCEDKN----VVYCYVPSKTALGRACGVSRA 98 
                   3444555556666666666.5566788999**********.88888777776665.****************....444444455567777788887 PP

  RNase_P_pop3 126 ...gmllvrkdasldkklaklvs 145
                        +  ++ +     l ++++
    KHJ34186.1  99 viaASITTNEASD----LMNQIK 117
                   3222233333333....333333 PP

>> PELOTA_1  PELOTA RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   7.7e-07    0.0035      17      71 ..      30      86 ..      18      98 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 7.7e-07
    PELOTA_1 17 edinliKPgigEaTRvlLRRvPekvlvrdeee..pdlahlllLakekgvpveevpdl 71
                +++   K g  EaT+ l R + e ++++++++  + l hl lL+++k+v +  vp++
  KHJ34186.1 30 SHYRQLKKGANEATKTLNRGIAEIIILAADTAplAILLHLPLLCEDKNVVYCYVPSK 86
                66778999******************9999885567899**********99988876 PP

>> TetR_C_28  Tetracyclin repressor-like, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.2   6.2e-05      0.28      17      82 ..       6      75 ..       1      77 [. 0.70
   2 ?    0.7   0.0      0.16   7.2e+02      20      39 ..      96     115 ..      85     125 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 6.2e-05
                -HHHHHHHHHGGGSHHHHHHHHH..HHHHHS-.-TTGG.-HHHHHHHHHHHHHHHHHHHHHHSSS---HH CS
   TetR_C_28 17 rallaallaalaedpellepwre..wyrrwle.rlead.gldpvlatlvrlAadGlwlaellglppldpe 82
                ++ +a+ +a ++   e l+++++  +yr+ ++ + ea+ +l    a+++ lAad + la ll lp l ++
  KHJ34186.1  6 NESAAWPIADASLAQEILDLVQQasHYRQLKKgANEATkTLNRGIAEIIILAADTAPLAILLHLPLLCED 75
                44555556666666777777776224555555444555477799********************998876 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.16
                 HHHHHHHGGGSHHHHHHHHH CS
   TetR_C_28  20 laallaalaedpellepwre 39 
                 ++a++aa ++  e+ +++++
  KHJ34186.1  96 SRAVIAASITTNEASDLMNQ 115
                 56888888888887777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       991  (0.0552736); expected 358.6 (0.02)
Passed bias filter:                      739  (0.0412181); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 951.87
//
Query:       KHJ34187.1  [L=333]
Description: putative trap-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-43  146.6   0.0    9.6e-43  146.3   0.0    1.1  1  AIM24     Mitochondrial biogenesis AIM24


Domain annotation for each model (and alignments):
>> AIM24  Mitochondrial biogenesis AIM24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.3   0.0   5.3e-47   9.6e-43       1     201 []      58     302 ..      58     302 .. 0.81

  Alignments for each domain:
  == domain 1  score: 146.3 bits;  conditional E-value: 5.3e-47
                 EEEESSSS-EEEEEE-TT-EEEE-CCGEEEEETTEEEEE--------------EEEEEEE...........S.SS-...EEEEE--SSSE.EEEEEEG. CS
       AIM24   1 fevlgepssllsvtLspgeelyaerGalvamsgkvemetgllkalkrlltgeslfllkft...........akiss...gtvllapklpg.tivtlel. 83 
                 fevlg+p+s+ls +Ls++++ y++rG+l+++ gk e            +t ++l ll+++           +kiss    ++l+++k+p  ++++l+l 
  KHJ34187.1  58 FEVLGTPYSILSASLSASQNFYTQRGTLIGIHGKPE------------NTRSKLVLLEPFrrsllgipflyQKISStspTNLLISTKSPItSFTVLKLd 144
                 8***********************************............7777777777777777777777744444445***********988888887 PP

                 GTT.EEEEEGGGEEEEETT-.EEEEEEEE--SSGGGTS-EEEEEEESSSEEEEEEECSEEEEEEE.EEEEEEEGGGEEEEETT................ CS
       AIM24  84 gggdwlivqkdafLAatgnv.eldikfqkglkglfggeglflqkltGrGlvalsgyGaiyeielkageelvvdpghlvafsgs................ 165
                 g+ dw+i+q +a++A+tg++ +++  f++g    +g     ++k+tGrGl+al+g G+iy+i+l +gee++v+pg+++a++ s                
  KHJ34187.1 145 GSIDWMIAQTKALVAWTGQSlSFSPVFNRG----LGVAYWGTTKVTGRGLMALCGTGNIYQIQLRDGEEYIVHPGNILAYTISqqhppqpyrlsnfrly 239
                 899***************663777777765....34444567*****************************************8888888887776666 PP

                 ............EEEEEEEET......................T---STTTTS-EEEEEEEEEEEEEESS CS
       AIM24 166 ............lkfdiervg......................glkrrligGeglflkltGpgtvllqsr 201
                             l       +                      +++r++i+G++l+lk+ Gp ++l++sr
  KHJ34187.1 240 vpsmkssavivdL-------KfiqslrqsyiwqrliyyyriirTFMRQIIWGDQLYLKFNGPMKILISSR 302
                 6655555555441.......04444445566666666677777*************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       432  (0.024095); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.17s 00:00:00.64 Elapsed: 00:00:00.35
# Mc/sec: 2819.74
//
Query:       KHJ34188.1  [L=190]
Description: hypothetical protein EV44_g5913 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.02   15.0   4.1      0.035   14.2   4.1    1.3  1  T3SS_needle_E    Type III secretion system, cytoplasmic E com
       0.11   12.5   0.1       0.15   12.0   0.1    1.2  1  Glyco_tran_WecB  Glycosyl transferase WecB/TagA/CpsF family


Domain annotation for each model (and alignments):
>> T3SS_needle_E  Type III secretion system, cytoplasmic E component of needle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   4.1   3.9e-06     0.035      20      54 ..     127     161 ..     119     162 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.9e-06
                    HHHHHHHHHHHHHHHCCTSSHHHHHHHHHHHHHHH CS
  T3SS_needle_E  20 qdrLeaArarLkqalsspqspeeYqqlqllaeAle 54 
                    ++ Le++ ++L ++ +s q p+++qqlq++ ++++
     KHJ34188.1 127 IRALERISRNLGSQVQSIQVPQQHQQLQQQKQSAL 161
                    688***************************99875 PP

>> Glyco_tran_WecB  Glycosyl transferase WecB/TagA/CpsF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   1.6e-05      0.15      19      86 ..      92     158 ..      79     167 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.6e-05
  Glyco_tran_WecB  19 lgkplpervagidlieelleraeeeglrvfllGgkpevlekaaerlrekypglriagthdgykeeeee 86 
                         + ++++ gi+l+++ +++  + g+   +lG +   le++ ++l ++++ +++   h++  +++++
       KHJ34188.1  92 EDMNEKQNLHGISLVHREYQESGKFGWARSILGQEIRALERISRNLGSQVQSIQVPQQHQQL-QQQKQ 158
                      34567999**************999******************************8877764.33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       702  (0.0391544); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1542.42
//
Query:       KHJ34189.1  [L=222]
Description: hypothetical protein EV44_g5635 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       358  (0.0199677); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1730.21
//
Query:       KHJ34190.1  [L=538]
Description: putative rhomboid family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.7e-23   81.2   8.8    1.4e-22   80.3   8.8    1.4  1  Rhomboid   Rhomboid family
  ------ inclusion threshold ------
       0.15   11.3   0.4       0.26   10.6   0.4    1.2  1  Phage_CRI  Phage replication protein CRI
       0.27   11.7   5.1      0.072   13.5   1.3    2.0  2  DUF3975    Protein of unknown function (DUF3975)


Domain annotation for each model (and alignments):
>> Rhomboid  Rhomboid family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.3   8.8   2.4e-26   1.4e-22       9     148 ..     375     528 ..     369     530 .. 0.80

  Alignments for each domain:
  == domain 1  score: 80.3 bits;  conditional E-value: 2.4e-26
                 HHHHGGG--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHH-S...-EESSHHHHHHHHHHHHHHHHCCCCGS----HC. CS
    Rhomboid   9 rlltsmflHagwlHllfNmlallvfGsplerrlGslrflllyllsglagslls...llfsaesesplvGaSGaifgllgallvlvprnrkllrkliia. 103
                  ll + ++H ++ Hl++Nm  l++fG++l + +G+ +fl lyllsg++++++s   +++ ++ +s ++GaSGa+ +++ a+++  ++++++l  +++  
  KHJ34190.1 375 SLLGCFWSHQSISHLILNMSLLYIFGTRLHEDIGRGNFLGLYLLSGTISNFFSltcWVLMKNFSSSSIGASGAVIAVMTAFSLSKINEKISLTEPFPLd 473
                 678899******************************************98887222455555556****************************999998 PP

                 .......CCCCCCCCCCHHHCTSS........STTTHHHHHHHHHHHHHHHHHHCCH CS
    Rhomboid 104 ....llllllfillnlvlgllpra........ggvsnlAHlgGllaGlllgllllrr 148
                     + +++l++++ +   l++ +         + ++++H+gG laG+l+++ll+++
  KHJ34190.1 474 fwtfVSSMVLVFSFTF--DLFALRkfhvagrsISNDHYGHIGGYLAGALWTYLLSSE 528
                 8765333333333332..2222224468886677789***************99875 PP

>> Phage_CRI  Phage replication protein CRI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.4   4.3e-05      0.26     195     253 ..     219     277 ..     215     290 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 4.3e-05
   Phage_CRI 195 KldEiqhqlkeLkkkakkektsryhkvieeLskpelqefAknkLRfElrlktrelekln 253
                 K  E++ ++ eL++ +k+++ ++ ++  e+++++   e  +nk+++E r +  +l+   
  KHJ34190.1 219 KIRELNIKKRELEEEQKAKEDEKNNQANEIFQNNGFLEIPSNKVKLERREEHPWLKYYR 277
                 899**********************************************9999998665 PP

>> DUF3975  Protein of unknown function (DUF3975)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   1.3   1.2e-05     0.072      16      77 ..     300     362 ..     293     364 .. 0.81
   2 ?   -2.4   0.1       1.1   6.8e+03      58      74 ..     447     463 ..     432     465 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.2e-05
     DUF3975  16 givillqisfhii.ewlfhkvvsiltflpnmtlemisivrsiiasiaiviiwsiaklwnklfk 77 
                 g+++l  i+f +i   l+   +     +pnm l   +++  ii   ai  +w + k+w  l k
  KHJ34190.1 300 GLLMLGVIAFSLIfTELYTPPIESARVFPNMPLSAATVIGIIIVNSAIFCLWRVPKFWRILNK 362
                 5666667777655245677777777889******************************87755 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.1
     DUF3975  58 asiaiviiwsiaklwnk 74 
                 a ia++  +s++k+ +k
  KHJ34190.1 447 AVIAVMTAFSLSKINEK 463
                 56888888899988777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (538 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1213  (0.0676558); expected 358.6 (0.02)
Passed bias filter:                      757  (0.0422221); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.22s 00:00:00.81 Elapsed: 00:00:00.36
# Mc/sec: 4424.91
//
Query:       KHJ34191.1  [L=1259]
Description: putative dna repair protein rad51 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.3e-123  413.5   2.2   1.7e-123  413.1   2.2    1.2  1  Nup160    Nucleoporin Nup120/160
  ------ inclusion threshold ------
       0.26   11.5   3.8        1.7    8.9   0.3    2.8  2  Med22     Surfeit locus protein 5 subunit 22 of Mediator comp


Domain annotation for each model (and alignments):
>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  413.1   2.2  1.9e-127  1.7e-123       7     537 .]      41     584 ..      29     584 .. 0.92

  Alignments for each domain:
  == domain 1  score: 413.1 bits;  conditional E-value: 1.9e-127
                 TT-------------HHHHHHHHHHHTTCEESSEEEEESSSSEEEEEE.EETTEEE..EEE---SSSS-...-EEEEEE-SS-SESSSESEEEEESSSE CS
      Nup160   7 gssssqdstkasrtaedEeafgarvaatagvvyfrksnsynrfilWrvltdgktLe..lvelslkssll...nnnlrldFpssllpscvsftdsesgdv 100
                 g+ +s++ +++ ++aedE+ f +r++at +++y+r +n +++++l rv++++++L+  +v+ls  s+++     +lr++Fp+s+lp c++f+ds ++d 
  KHJ34191.1  41 GVKQSRSIIAITQNAEDEKTFRQRYIATSSSIYHRRHNRTPQSFLSRVIENQNVLSirVVDLSVPSNVAepfIYTLRFTFPHSILPTCIAFSDSRERDE 139
                 5667777777777777*************************************************666522268************************* PP

                 EEEEEEESSS-EEEEEEEHHHHHSTT----S..TSBEEB-SSGT.TTS-EEEEEE-SSSEEEEEETTS-EEEEEE..ETTEEEEEEEEE-------B-- CS
      Nup160 101 livivtttsvhlyvlrlssdffrsskailndldewckidspsslstsskpgrlaavssnellvsladggllklkr..dedggawkesvfepksfllsls 197
                 l v+v+t+s++ ++l l++dff ++++i++++++wc i+ p sl + + p+rl+a + nel++s++dg+l +l+r  d  g +wke+ +++ +++ s++
  KHJ34191.1 140 LTVYVLTDSKQIWTLSLRPDFFSNASSIDENMTDWCNIYYPRSL-GIKTPYRLVALNDNELMISFHDGALARLERseDLSGYSWKEQQYNEGGWGHSFR 237
                 ********************************************.******************************8888899***************** PP

                 TTTT.TSS--SS---TT-ECEEEEET........TTTEEEEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEESEEESSSSEEEE........ CS
      Nup160 198 gllglladpsrrksgasvalsldvavavvei...gqtylfalsrdgkLrvWnlltgkclatidllrdeeaqdessskstldpaesslirvs.dggqsyl 292
                   +++++++ + ++g+ v+ s+++++a       g ty+f+++ d++Lr+Wnl+ g++++++d+l++e ++++++++  +dp++s l+ v+ +++    
  KHJ34191.1 238 SMVPFHTASGIYYEGNYVQPSAATSIASPANiieGVTYIFTVTIDHRLRIWNLDLGRIAYSGDILTQELETQDEAKQ-IIDPSQSRLVQVIsNNRIGII 335
                 *****************88777777654322578*******************************878888888888.************955566789 PP

                 ...E--GGG-EEEEEEEEEEE-...SSSEEEEES-S------S-TT--EEEEEEEEE-T...TEEEEEEEEEETTEEEEEEEEEE-SS-SS-....EEE CS
      Nup160 293 vvtyspssggefkvwkvkkedtsvslglvdlfleqtivpadpdssnvweLrDfaltsse...kgfelwalwknnegsvlkvlkinfesdead...tddd 385
                 ++tysp s+g fk+w+v +e++ ++l l+dl +++ ++p++p+s ++w+L+Dfa+ts +   +++++w+lwknn++++l  l+++ + + +    + + 
  KHJ34191.1 336 CITYSPLSSGVFKLWNVVAEND-GNLTLIDLYPNCILTPPAPSS-DIWTLADFAVTSVNakeDKISIWILWKNNLTYQLLNLEFSTSLETQAqniWNEG 432
                 99**************999988.88**********777999999.************9999****************866666654433332558**** PP

                 EEE--------TTTTTS--SSGGG-SSHHHHHHHHH--.-HHHHHHHHHHHTTSS--STHHHTS-HHHHHHHHHHHHHTTS.-B-SSSSSB-HHHHHHH CS
      Nup160 386 WssvsaseritdketlgdeedveeatkeyldrilepGrFsnavletALsifrrnlsssssvkslssaelkeevcsavesei.lndvseggadyeeyrea 483
                 W++v  +++ + + +   ++d ++ t+++ld+il pGrFs a++et L+i++ +l+   +  s +s +l ++ c++++s++ l ++s g  d++ +r++
  KHJ34191.1 433 WKAVVLDQLCDIPIPKIQAHDPSDVTDKWLDFILFPGRFSLATIETGLAIYEQGLGME-KDFSCKSRSLVDRMCTSIASTAaLARSSVGSLDFDLFRTT 530
                 ****999999989888888888888888***************************988.999************************************* PP

                 HHHHHHHHHHHHHHTSSSSG-EEEEEEBTTTTBEEEEETTEEEEEE---HHHHH CS
      Nup160 484 skreWerFyrlceeldkaaseplsLsldpqadvpwlirrdslslirpcselEvi 537
                 + ++W+rFyrl+ +l+ +++e+lsL++dp++++pw+  +d+ls++r++++lE+i
  KHJ34191.1 531 THTQWMRFYRLLIDLHDQRGEALSLVIDPDEEMPWVTLADGLSIVRESTQLEKI 584
                 ****************************************************86 PP

>> Med22  Surfeit locus protein 5 subunit 22 of Mediator complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.3   0.00019       1.7      12      62 ..     675     726 ..     664     756 .. 0.79
   2 ?    2.4   0.3      0.02   1.8e+02      63     101 ..    1196    1235 ..    1181    1239 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00019
       Med22  12 dnfreliklakv.ndekqkeks.taaqeslemevraaqlvraiedLlkLtrel 62 
                 + ++e+i+l+   + +  k+++ +++q s +++   + +v++++++++L r++
  KHJ34191.1 675 EAYTEIIELLGPfK-NADKSNRsSQQQISVMTKFGNQIIVKGTQQIIQLYRSI 726
                 4699******9954.444444437899999*********************98 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.02
       Med22   63 KelwiLndfpel.neeikdqeeeldeeneelsqllnnlre 101 
                  K+ wiL+ ++++ n++   +e+  ++++  ls+l nn + 
  KHJ34191.1 1196 KQAWILQEIENTeNQSSMINEQSPKRQVITLSDLRNNYQA 1235
                  9********9994555556666666666666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1259 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       835  (0.0465726); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.77u 0.24s 00:00:01.01 Elapsed: 00:00:00.41
# Mc/sec: 9287.00
//
Query:       KHJ34192.1  [L=757]
Description: putative pumilio domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-31  109.6   0.0    1.6e-31  109.6   0.0    5.4  6  CPL       CPL (NUC119) domain


Domain annotation for each model (and alignments):
>> CPL  CPL (NUC119) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.4   4.5         1   1.8e+04      24      48 ..      36      60 ..      27      86 .. 0.51
   2 ?    0.9   0.6     0.029   5.3e+02      18      48 ..     117     148 ..     111     255 .. 0.70
   3 !    2.8   0.0    0.0079   1.4e+02      78     129 ..     318     367 ..     313     375 .. 0.78
   4 ?   -3.1   0.0      0.52   9.4e+03      69     112 ..     392     432 ..     390     442 .. 0.61
   5 !  109.6   0.0   8.9e-36   1.6e-31       2     142 ..     478     634 ..     477     635 .. 0.95
   6 ?    0.4   0.1     0.041   7.3e+02      55     105 ..     646     695 ..     644     742 .. 0.67

  Alignments for each domain:
  == domain 1  score: -7.4 bits;  conditional E-value: 1
         CPL 24 eviklLkegdelakktSKKdaevRr 48
                + +k+ ++ ++ +k+ SK ++e + 
  KHJ34192.1 36 DKVKDSENEEKSEKSRSKSNSEKKS 60
                5555555555555445554443332 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.029
         CPL  18 gryfspev.iklLkegdelakktSKKdaevRr 48 
                 +  ++pe  +++L++g++ +++++K  +   +
  KHJ34192.1 117 QDGLHPERvKAILQNGQSSREAHAKQKQIAQE 148
                 55556654367788888888888886554433 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.0079
         CPL  78 qfvaevLlsaegdkqeaieaiaklakgdlvaeekdeelhliekpfgsrlLKa 129
                  +++e+L ++ g+++++++++++l+++ +  ++k + + l+++ +++ +L +
  KHJ34192.1 318 SVLSEILSHDPGKRETIMNSLMELINQLI--QKKMTGFTLLHDAMLQYFLNT 367
                 6889***********99999999999984..337777777777777777665 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 0.52
         CPL  69 ellsdnlgsqfvaevLlsaegdkqeaieaiaklakgdlvaeekd 112
                 +l  +++gs +v+ +L +++ + +++i   ++++k+ l++   d
  KHJ34192.1 392 NLAFTKSGSRLVCLALAHENAKGRKLI---MRAFKDTLQMMASD 432
                 566778888888888887777666444...44444444444444 PP

  == domain 5  score: 109.6 bits;  conditional E-value: 8.9e-36
         CPL   2 dkygRrvllYllsgrdgryfspev...iklLkegdelakktSKKdaevRrkELleaispallsaiaknaeellsdnlgsqfvaevLlsaegdkqeaiea 97 
                 + ++R++llYl++gr++++f+ +    ik+L+e++  +k tSKKd+++Rr+EL +++sp ll++i  +a+ l+++++g+qfv+ vLl a+gdk+ a++a
  KHJ34192.1 478 NLNARTTLLYLFEGRSKALFPISLssdIKILEEIEDARKLTSKKDSKIRRAELAKELSPYLLKVIEVAASRLIQTSFGCQFVTTVLLEAQGDKSAALHA 576
                 6789*****************988888***********99*********************************************************** PP

         CPL  98 iaklakgdlvaee...............kdeelhliekpfgsrlLKaLiqgdeekwenke 142
                 +ak+a+g+++++                 +   h+++ ++g+ +L++L++g+  ++++++
  KHJ34192.1 577 VAKTAAGNPTSTYldkiinapdgstcddTSSLTHISSSSYGGKMLRSLLAGG--RFNHET 634
                 ********98887999999*9**9998777789*******************..888876 PP

  == domain 6  score: 0.4 bits;  conditional E-value: 0.041
         CPL  55 ispallsaiaknaeellsdnlgsqfvaevLlsaegdkqeaieaiaklakgd 105
                 +s+ l+ +i +n+ ++    + s +++++++s++  k++ + +++k+ k  
  KHJ34192.1 646 FSNILYPYIRENILQWAIGPA-SFVILALVESESFSKKQEVLELLKSEKTL 695
                 577788888888888877765.45677777888877775444444443333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (757 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2378  (0.132634); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.25s 00:00:00.99 Elapsed: 00:00:00.42
# Mc/sec: 5455.48
//
Query:       KHJ34193.1  [L=249]
Description: hypothetical protein EV44_g6399 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.022   15.1   0.3      0.065   13.6   0.3    1.8  1  TSC22       TSC-22/dip/bun family
      0.047   14.1   3.9       0.31   11.5   0.3    2.2  2  MitMem_reg  Maintenance of mitochondrial structure and functi
       0.13   12.4   2.2         26    5.0   0.0    3.3  3  DUF1192     Protein of unknown function (DUF1192)


Domain annotation for each model (and alignments):
>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.3   1.1e-05     0.065      16      47 ..      62      92 ..      61     102 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.1e-05
       TSC22 16 VevLkekIkeLeernseleeENslLkalaspe 47
                +e L +k+ eLe+ +++l+  N++Lk+  ++ 
  KHJ34193.1 62 IESLYSKVNELENSIAHLKDSNQQLKS-FTQG 92
                7999**********************5.4555 PP

>> MitMem_reg  Maintenance of mitochondrial structure and function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3   5.1e-05      0.31      14      69 ..      61     116 ..      51     134 .. 0.83
   2 ?    3.8   0.3     0.013        76       1      75 [.     141     219 ..     141     238 .. 0.62

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 5.1e-05
  MitMem_reg  14 siqdasstlstglnrqyyslkilqerldlikdYlkkveege...lpvnhe.ilrnlqkll 69 
                 +i    ++l +++n+ ++s++ l++  +++k++ +  ++++   ++++h+ il++ q+++
  KHJ34193.1  61 TI----ESLYSKVNELENSIAHLKDSNQQLKSFTQGMISKTnteTNIDHQlILEHDQECI 116
                 33....599****************************97655559999*99998877766 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.013
  MitMem_reg   1 Eaeeigvehllkpsiqdas.stlstglnrqyy..slkilqerldlikdYlkkveeg..elpvnheilrnlqkllnllPhl 75 
                 Ea+  g++  +  ++q+++ ++l++  n+++   s++ l++    +k+Y ++v+e+  e p+nh+ +  +  +   l ++
  KHJ34193.1 141 EARGLGLQITTSSTTQKEKkTSLTSLANNNLRdvSISHLEDG-VMVKSYQNEVAEKipEFPSNHHDIDAMELMTDELIKI 219
                 666667777776556555555555555555541256667777.67999*****955334788888776666666555555 PP

>> DUF1192  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0    0.0043        26      14      40 ..      54      80 ..      44      87 .. 0.66
   2 ?    4.0   0.2    0.0087        52      26      37 ..     130     141 ..     126     143 .. 0.90
   3 ?    0.9   0.0     0.081   4.8e+02       6      27 ..     159     181 ..     155     194 .. 0.73

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0043
     DUF1192 14 gqDLslLSveELeerIalLeaEIaRle 40
                g+ L++L +e L   + +Le  Ia+l+
  KHJ34193.1 54 GEALKSLTIESLYSKVNELENSIAHLK 80
                555666666666666666666666665 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.0087
     DUF1192  26 eerIalLeaEIa 37 
                 ++rI+lL aEI+
  KHJ34193.1 130 QDRIKLLVAEIE 141
                 79*********8 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.081
     DUF1192   6 rkkp.theigqDLslLSveELee 27 
                 +k++ t ++  +L + S++ Le+
  KHJ34193.1 159 KKTSlTSLANNNLRDVSISHLED 181
                 444488999999*****999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1385  (0.0772491); expected 358.6 (0.02)
Passed bias filter:                      599  (0.0334096); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 1983.36
//
Query:       KHJ34194.1  [L=283]
Description: hypothetical protein EV44_g0529 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2133.81
//
Query:       KHJ34195.1  [L=741]
Description: putative transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-05   23.5   0.0     0.0022   17.1   0.0    2.4  2  PhoD      PhoD-like phosphatase


Domain annotation for each model (and alignments):
>> PhoD  PhoD-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   1.2e-07    0.0022      20     101 ..     228     318 ..     199     334 .. 0.67
   2 !    4.0   0.0    0.0012        21     251     287 ..     522     560 ..     386     604 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.2e-07
        PhoD  20 laeeedlDlvlhlGDyiYeyg..pgeyaseaaelgrevepp..........keivtl.adYReryaqyktdadlqaahaaapfivvwDDHEvaNn 101
                 + +++ + +++  GD iY +g   ++      +++ + ++p          +   +  + Y ++y + ++++ + + + ++p + +wDDH + + 
  KHJ34195.1 228 VHKKTPFHVMIGGGDQIYNDGirVDG----PLKKWANMPDPldreqypfssSLKRKCdKYYVDNYILWYSSEPFTSCNRKIPQLNIWDDHDIIDG 318
                 3344588899999*******864222....222233333333334555665333333145899***************************99875 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.0012
        PhoD 251 e...rlletikeakirnvVvLtGDvHaawandldykdpdg 287
                 +   + l+ i+++   ++ +L+GDvH a+++++ y +p+ 
  KHJ34195.1 522 RilvEQLQEIAKEYSVRISFLGGDVHLAAVGRF-YSNPRH 560
                 44443345555555588899************9.665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (741 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.24s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 5383.93
//
Query:       KHJ34196.1  [L=321]
Description: putative vacuolar protein sorting-associated protein 26 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.4e-129  431.0   0.2   1.6e-129  430.7   0.2    1.0  1  Vps26       Vacuolar protein sorting-associated protein 26
      0.001   19.1   0.5       0.12   12.5   0.4    3.5  2  Arrestin_N  Arrestin (or S-antigen), N-terminal domain


Domain annotation for each model (and alignments):
>> Vps26  Vacuolar protein sorting-associated protein 26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  430.7   0.2  1.8e-133  1.6e-129       1     274 [.       5     278 ..       5     279 .. 0.99

  Alignments for each domain:
  == domain 1  score: 430.7 bits;  conditional E-value: 1.8e-133
                 TTTSEEEEEEETTTTTS-EEEEE-GGG-EEEEEEE-TT--EEEEEEEEESST--EEESEEEEEEEEEEEETTTGGGEEEEEEEEEEEE-SEEESS-EEE CS
       Vps26   1 fkttidieikldneeerktvdvktekgkkeklkvyedgeslsGvvtirlkdskkvehqGikveliGqiellydkgnsvdfislvkdlakpGelqesksf 99 
                 f +++di+i+l+++++r++vd+ktekg+ ek+++y+dges++G vtir kd+k++eh+Gikv++iG+ie+++d+gn+++f+sl ++la pG+lq+ + f
  KHJ34196.1   5 FSSPVDIDIVLEDGDNRQMVDMKTEKGRREKAPLYKDGESVKGAVTIRPKDGKRLEHTGIKVQFIGTIEMFFDRGNHYEFLSLGQELAAPGDLQHPQAF 103
                 6789*********************************************************************************************** PP

                 EEEETS----S--EE-SSEEEEEEEEEEEE-SSS-EEEEEEEEE---B---S----EEEEEEETTTEEEEEEES-SEEETT-EEEEEEEEEEE-S-EEE CS
       Vps26 100 pfefkklekryesYkGknvklrYvlrvtvvRklkditkekdlivhefttaPevnksvklevGiedclhiefeyskskyhLkdvivGkiyfllvrikiks 198
                 +f+fk++ek+yesY+G nv+lrY+lrvtv+R++ d+++ekd++v+++ + Pe+n+s+k++vGiedclhiefeyskskyhLkdvivG+iyfllvr+kik+
  KHJ34196.1 104 DFNFKSVEKQYESYSGINVRLRYFLRVTVSRRMADVIREKDIWVYSYRIPPEMNSSIKMDVGIEDCLHIEFEYSKSKYHLKDVIVGRIYFLLVRLKIKH 202
                 *************************************************************************************************** PP

                 EEEEEEEEEEESSTTCEEEEEEEEEEEEEEES---TT-EEEEEEEGGGG-----EEEETTTEEEEEEEEEEEEETT CS
       Vps26 199 melslikrestGlaenvakdsetiakyeimDGasvrgesiPirlflsgydltPtlrdvnkkfsvkyylnlvlvded 274
                 mels+i+re+tG+a+n+++++et++++eimDG++ rge+iPirlfl g+dltPt+r+vnkk+s +yyl+lvl+ded
  KHJ34196.1 203 MELSIIRRETTGAAPNQYNENETLVRFEIMDGSPSRGETIPIRLFLGGFDLTPTFREVNKKYSTRYYLSLVLIDED 278
                 **************************************************************************98 PP

>> Arrestin_N  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.4   1.3e-05      0.12       8     113 ..      35     177 ..      29     210 .. 0.69
   2 ?    0.1   0.0     0.085   7.6e+02       2      25 ..     171     194 ..     170     229 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.3e-05
                 SEEEEETT--EEEEEEE-CCCCTT...CEEEEEEEEEEEESSSSTTTT.........................CCCEEEEEEEEEEEEESTSSSSS.SS CS
  Arrestin_N   8 rdevyhpgetvdGkvlleteelkka..rkvkielsgkartgweeseva.........................gktfrkdltlkkkqeyleteksllks 79 
                 + + y+ ge+v+G v++++++ k++  +++k+++ g++++  +  ++                          ++ +++ +++++    ++ +  l  +
  KHJ34196.1  35 KAPLYKDGESVKGAVTIRPKDGKRLehTGIKVQFIGTIEMFFDRGNHYeflslgqelaapgdlqhpqafdfnfKSVEKQYESYSGIN--VRLRYFLRVT 131
                 5678*************999877652278*******999877766655678888888888888887777776555555555555543..3333333344 PP

                 SSHHHHHHHH-TTEEEEEE---TTS--SE............CSGEE CS
  Arrestin_N  80 kkdsqekLpkGehafpFsfelPknlpsSf............eGkag 113
                  ++   +  + + ++ +s+++P+++ sS+            e+++ 
  KHJ34196.1 132 VSRRMADVIREKDIWVYSYRIPPEMNSSIkmdvgiedclhiEFEYS 177
                 4466666666788888888888888888855555555555555555 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.085
                 EEEES-SEEEEETT--EEEEEEE- CS
  Arrestin_N   2 tieldkrdevyhpgetvdGkvlle 25 
                 +ie++ ++  yh  + + G++ + 
  KHJ34196.1 171 HIEFEYSKSKYHLKDVIVGRIYFL 194
                 6899999999*********99764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       409  (0.0228122); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2456.76
//
Query:       KHJ34197.1  [L=391]
Description: hypothetical protein EV44_g0298 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.057   12.9   0.2      0.057   12.9   0.2    1.5  2  DUF3500   Protein of unknown function (DUF3500)


Domain annotation for each model (and alignments):
>> DUF3500  Protein of unknown function (DUF3500)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.6       0.4   7.2e+03     189     189 ..     222     222 ..     199     254 .. 0.45
   2 ?   12.9   0.2   3.2e-06     0.057     164     244 ..     298     379 ..     259     382 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 0.4
     DUF3500 189 g 189
                  
  KHJ34197.1 222 D 222
                 1 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 3.2e-06
     DUF3500 164 ellqsLseeqqkkavlsekap.rdlvganrdnrvvpkeGvavseltaeqqelllalikeylerlpeeaaeerlaeiekelde 244
                 + +  Lsee+q + v++e+ + + + +++++nr+++ +Gv  s+l+ e qel  + i+++   lp++++   +++ +k+ ++
  KHJ34197.1 298 QEVSVLSEEEQVRHVIKETETwSVVKSKEKRNRISKVNGVESSNLDLETQELKNSNIATFAPSLPSQTTYLFVQQQNKDAED 379
                 456789999999999999888355556677888**********************************998888877777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2500  (0.139439); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 2722.67
//
Query:       KHJ34198.1  [L=221]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1621.50
//
Query:       KHJ34199.1  [L=497]
Description: putative cytochrome c oxidase assembly protein cox15 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   3.9e-112  374.5   1.1   4.7e-112  374.3   1.1    1.0  1  COX15-CtaA  Cytochrome oxidase assembly protein


Domain annotation for each model (and alignments):
>> COX15-CtaA  Cytochrome oxidase assembly protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  374.3   1.1  2.6e-116  4.7e-112       1     323 [.      99     456 ..      99     457 .. 0.95

  Alignments for each domain:
  == domain 1  score: 374.3 bits;  conditional E-value: 2.6e-116
  COX15-CtaA   1 arwlllvlllvllvvvlGgltRltdsGlsitdWppctGalppltdeeweaefekyketpeykkl.agmtlaefkaiawiEwiHRllgrllGllilvpll 98 
                 a+wll++++ v+++vvlGgltRlt+sGlsit+W+p+tG+lppl++++w+ efeky+++pe++ l ++m+l+efk+i+++Ew HR +gr++Gl +++p++
  KHJ34199.1  99 AYWLLGSAASVFGIVVLGGLTRLTESGLSITEWKPITGSLPPLSQADWDLEFEKYRASPEFHMLnSNMNLSEFKKIYYMEWGHRQWGRIVGLSFVFPAI 197
                 58************************************************************************************************* PP

  COX15-CtaA  99 yflakkrisrelkkllllllllvglQGllGwwmVksgLse.......kprvspyrlaaHLllaflllalllwlalrllake......ae.....saeee 179
                 yf+ k+++s ++  +l+ + +l+g+QG+lGw+mVksgL++       +prvs+yrlaaHL++af++++++lw +l++l+ +      ++     ++ ++
  KHJ34199.1 198 YFVSKRKVSFPMSVRLFSISGLIGFQGFLGWYMVKSGLEDslfapgsHPRVSQYRLAAHLGTAFTCFTAMLWNGLTILRTHellsqpQKsyallQQLNS 296
                 **************************************99**************************************999999876225667889999 PP

  COX15-CtaA 180 aaakklrllallllallllqialGalvagldAglayntfplmggelipdklplc...........eldwrnlfenpatvqfaHRllAilvllvllllai 267
                 +  + +r  +++l +l+++++++Ga+vagldAgl+yn+fp mg++l+p+  +l+           +l+wrn++enp+tvqf+HR+lA+++++++l+l +
  KHJ34199.1 297 PILSPFRKSVAALSVLIFITALSGAFVAGLDAGLVYNQFPYMGDDLYPPMEELFdpsysskadgsDLIWRNMLENPTTVQFDHRVLAMTTTTAVLCL-W 394
                 99***********************************************66666*******************************************.6 PP

  COX15-CtaA 268 lllrkars.....pklarlavll.aallllQvalGistvllavplslavaHqlgaallllal 323
                 ++ r + +     p   r+++l  + ++++Qv+lGist+++ vp++la++Hq+ga++ll+a+
  KHJ34199.1 395 AYSRFNPRvrnsiPYSVRKGILGvVSIVFYQVTLGISTLIYLVPIPLAAMHQAGALALLTAA 456
                 666655556888977777777766***********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (497 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 3874.95
//
Query:       KHJ34200.1  [L=564]
Description: putative pci domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.015   15.8   0.0       0.58   10.7   0.0    2.5  2  PCI       PCI domain
       0.13   11.6   0.0       0.19   11.0   0.0    1.2  1  DUF1978   Domain of unknown function (DUF1978)


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.0     0.033   2.9e+02       6      61 ..     335     393 ..     330     410 .. 0.70
   2 ?   10.7   0.0   6.5e-05      0.58      76     100 ..     478     502 ..     471     505 .. 0.88

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.033
                 HHHHHHHTSHHHHHHHHHHH..HHHHHHHTTHHH.HHHHHHHHHHHHHHHHHHHCESEE CS
         PCI   6 llkalrsgnlsgfseelkdl..eeelladdglaq.llesLekkvrerllrqvskiyssi 61 
                 +++a+r+g++  f+++       ++++ ++g++  ll ++e+ v++ l r+v++   ++
  KHJ34200.1 335 IIQAIRTGDMILFKKAFSPElgNQRWFFEKGVYLpLLGRCEMLVWRSLARKVFLLTYQF 393
                 556666666555544444433445666667776679***************99955555 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 6.5e-05
                 HHHHHHHHHHHTTSSSEEEETTTTE CS
         PCI  76 evEkilvklIrdgeirakidqesgi 100
                  vE i ++lI +g+i++++++ +g 
  KHJ34200.1 478 HVEAIMASLIQQGLIYGYLSHSQGK 502
                 69*******************9886 PP

>> DUF1978  Domain of unknown function (DUF1978)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   2.1e-05      0.19       9      81 ..      52     127 ..      49     130 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 2.1e-05
     DUF1978   9 aekkfrevkerledyrkavfwleengvidlendpkkWglstvptRka...lsevssdelwekkvllkkleskyeka 81 
                 a+ ++   +e+l  y + ++ ++en+ id++  +  W    v  R+      +v++++l    ++l +  s +  a
  KHJ34200.1  52 AQEALDGRNEKLDRYIEGFLPVSENESIDTNDMICAWPGFQVLIREYfkfWRDVDFNDLLMTHTFLSEVTSACIAA 127
                 5666677889***************************999999998866667899988888888888877777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (564 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3903.05
//
Query:       KHJ34201.1  [L=376]
Description: putative glutaminyl-peptide cyclotransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.4e-31  108.5   0.0    4.9e-31  108.0   0.0    1.3  1  Peptidase_M28  Peptidase family M28
  ------ inclusion threshold ------
        0.6    9.8   3.6        1.6    8.5   1.9    2.3  2  DUF1725        Protein of unknown function (DUF1725)


Domain annotation for each model (and alignments):
>> Peptidase_M28  Peptidase family M28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.0   0.0   5.4e-35   4.9e-31      13     195 ..     117     343 ..     101     346 .. 0.80

  Alignments for each domain:
  == domain 1  score: 108.0 bits;  conditional E-value: 5.4e-35
                    EEEEEEEE--B-TTTTCCT---TTTTHHHHHHHHHHHHHCHH..............GGCCSSEEEEEEEESSCSG........SSHHHHHHHH..H CS
  Peptidase_M28  13 evlllgAHyDsvgvgrgpifvGAdDnAsgvaalLelarvlaa..............sgsrpkrgvrflffdaEEa........gllGSkafak..a 84 
                     +l+l+AHyDs++    p+f GA+D+A+++a+l+  ++ + +              +g   ++g+++l++d+EE         +l+GS+ +a+  +
     KHJ34201.1 117 GRLVLAAHYDSKYD--PPGFIGAIDSAAPCAILMHAVKSIDKaltqkwaasetdgfKGLGEEHGIQILLLDGEESflrwtdtdSLYGSRSLAEawE 210
                    589**********7..779********************9999999*****9996655455*******************************8763 PP

                    HC..........CCTTEEEEEEECS-SSSS--EEE.....HHHHHHCHHHHHHHHHHHHHTT-TTSCCEEEEES.......STT-STTHHHHTTT- CS
  Peptidase_M28  85 kp..........elkkiaavlnlDmvgsggkellf.....esgdkssselekelkalakpvgraaaedpfders.......grgrsDhspflkagv 158
                    k+          +l+ i ++++lD++g++++ + +     +   k+ +++e+ +++l     + +++ +f+++        + +++Dh+pf ++gv
     KHJ34201.1 211 KTsnaalsvyhnPLDSISLLVLLDLLGAPNTIIPSyfettHWAYKKIAGIEARMRTLGLLRLKPSTNLIFPDSAktyfppgFMIQDDHIPFMARGV 306
                    2256678888889******************999888888444444555555555444433333334333333331112224677*********** PP

                    -EEEECTSSS-TTTTSTTSSGGGB-HHHHHHHHHHHH CS
  Peptidase_M28 159 pvldlaetgfpevyHtprDtldnidkdtlariaelvl 195
                     +l++++ +fp+v+Ht +Dt +n+d +t++++a+++ 
     KHJ34201.1 307 DILHIIPSNFPPVWHTLEDTGENLDMPTVEDLAKIMT 343
                    ********************************99886 PP

>> DUF1725  Protein of unknown function (DUF1725)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0     0.083   7.4e+02      11      17 ..     310     316 ..     310     316 .. 0.87
   2 ?    8.5   1.9   0.00018       1.6       2      11 ..     345     354 ..     345     354 .. 0.94

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.083
     DUF1725  11 nIiLSEi 17 
                 +Ii+S++
  KHJ34201.1 310 HIIPSNF 316
                 7****96 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00018
     DUF1725   2 FaGKWMELEn 11 
                 F+G WMELE+
  KHJ34201.1 345 FVGEWMELEG 354
                 99*******7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (376 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       246  (0.0137208); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 2656.09
//
Query:       KHJ34202.1  [L=222]
Description: putative tetratricopeptide repeat domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-10   39.4   0.0    9.4e-05   22.2   0.0    3.5  3  TPR_2     Tetratricopeptide repeat
    3.2e-06   26.7   0.0     0.0026   17.5   0.0    2.5  2  TPR_1     Tetratricopeptide repeat
    5.8e-06   26.5   0.0      0.074   13.3   0.0    3.2  3  TPR_12    Tetratricopeptide repeat
    1.1e-05   25.9   0.0     0.0034   18.0   0.0    2.5  3  TPR_16    Tetratricopeptide repeat
    1.9e-05   25.1   1.2     0.0015   19.2   0.2    2.7  2  TPR_14    Tetratricopeptide repeat
    4.2e-05   24.0   0.1     0.0016   18.9   0.0    2.7  3  TPR_19    Tetratricopeptide repeat
     0.0014   18.7   0.0      0.023   14.9   0.0    2.8  3  TPR_8     Tetratricopeptide repeat
     0.0018   18.2   0.0       0.65   10.2   0.0    2.7  2  TPR_7     Tetratricopeptide repeat
     0.0094   16.1   0.3      0.022   14.9   0.2    1.7  1  TPR_9     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.012   15.5   0.3        8.6    6.4   0.0    3.5  4  TPR_10    Tetratricopeptide repeat
      0.034   13.8   0.0         13    5.6   0.0    2.6  2  TPR_11    TPR repeat
       0.13   12.9   0.0          9    7.2   0.0    2.9  2  TPR_4     Tetratricopeptide repeat
       0.16   12.7   0.0        5.1    7.9   0.0    2.8  2  TPR_6     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0027       3.7       8      26 ..      95     113 ..      90     119 .. 0.84
   2 ?    5.3   0.0     0.019        26       1      23 [.     135     157 ..     135     164 .. 0.78
   3 !   22.2   0.0   6.8e-08   9.4e-05       1      31 [.     170     200 ..     170     203 .. 0.92

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0027
       TPR_2   8 GlayyklgdyeeAleafek 26 
                 G+  +++g++ eAl+++  
  KHJ34202.1  95 GNTSFRQGKHTEALRLYSL 113
                 9999************975 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.019
       TPR_2   1 aealynlGlayyklgdyeeAlea 23 
                 a ++ n+ ++++ l+++ e + +
  KHJ34202.1 135 ANLYANRSQVHMLLQNWPEGAID 157
                 57899************554444 PP

  == domain 3  score: 22.2 bits;  conditional E-value: 6.8e-08
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleld 31 
                 ++a++++G+++ ++g+ ++A+++ e+Al ++
  KHJ34202.1 170 PKAWWRRGRCLVEMGRIDDAIDWIERALVIE 200
                 68**************************775 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0045       6.3       8      26 ..      95     113 ..      94     118 .. 0.86
   2 !   17.5   0.0   1.9e-06    0.0026       2      31 ..     171     200 ..     170     203 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0045
                 HHHHHHTT-HHHHHHHHHH CS
       TPR_1   8 GnayfklgkydeAleyyek 26 
                 Gn+ f++gk+ eAl  y+ 
  KHJ34202.1  95 GNTSFRQGKHTEALRLYSL 113
                 78889**********9975 PP

  == domain 2  score: 17.5 bits;  conditional E-value: 1.9e-06
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALeln 31 
                 ka+ ++G ++ ++g+ d+A++  e+AL ++
  KHJ34202.1 171 KAWWRRGRCLVEMGRIDDAIDWIERALVIE 200
                 78889**********************875 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   0.0    0.0024       3.3       9      33 ..      94     118 ..      88     122 .. 0.72
   2 !   13.3   0.0   5.4e-05     0.074       2      72 ..     134     197 ..     133     199 .. 0.75
   3 !   12.0   0.0   0.00014       0.2       5      32 ..     172     199 ..     169     213 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0024
      TPR_12   9 laavlrrlgrydeAlellekaleia 33 
                  +++ +r+g+++eAl+l+   l++a
  KHJ34202.1  94 SGNTSFRQGKHTEALRLYSLGLDMA 118
                 5677788888888888887666555 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 5.4e-05
      TPR_12   2 vatalnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeal 72 
                 va+++ n+ +v++ l+++ e     e+++e+  ++ +p+      +    gr++ ++gr ++A+++ e+al
  KHJ34202.1 134 VANLYANRSQVHMLLQNWPEGAIDAEASVEAK-EVGNPK------AWWRRGRCLVEMGRIDDAIDWIERAL 197
                 67777778888888888888888888888888.554443......57778889999999999999988887 PP

  == domain 3  score: 12.0 bits;  conditional E-value: 0.00014
      TPR_12   5 alnnlaavlrrlgrydeAlellekalei 32 
                 a+ +++ +l ++gr d+A+++ e+al i
  KHJ34202.1 172 AWWRRGRCLVEMGRIDDAIDWIERALVI 199
                 5667888888888888888888888755 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0     0.019        26      37      64 ..      91     118 ..      80     122 .. 0.71
   2 ?   -2.1   0.0       4.7   6.5e+03      39      56 ..     140     158 ..     133     167 .. 0.63
   3 !   18.0   0.0   2.5e-06    0.0034      32      62 ..     168     201 ..     147     207 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.019
      TPR_16  37 llllgdaalrqgrlaeAaalyraalraa 64 
                 l ++g+  +rqg ++eA+ ly   l+ a
  KHJ34202.1  91 LRESGNTSFRQGKHTEALRLYSLGLDMA 118
                 6678888899999999998887766655 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 4.7
      TPR_16  39 llgdaalrqgrlaeAa.al 56 
                 ++ +++  +++++e a ++
  KHJ34202.1 140 NRSQVHMLLQNWPEGAiDA 158
                 5666677777777777444 PP

  == domain 3  score: 18.0 bits;  conditional E-value: 2.5e-06
      TPR_16  32 daaeAllllgdaalrqgrlaeAaalyraal...r 62 
                  ++ A++ +g+++ + gr ++A++++++al   +
  KHJ34202.1 168 GNPKAWWRRGRCLVEMGRIDDAIDWIERALvieG 201
                 3788*************************95544 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.085   1.2e+02      12      29 ..      99     116 ..      91     124 .. 0.83
   2 !   19.2   0.2   1.1e-06    0.0015       1      40 [.     170     209 ..     170     211 .. 0.91

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.085
      TPR_14  12 lalGdpdeAiallrrala 29 
                 +++G++ eA++l+   l+
  KHJ34202.1  99 FRQGKHTEALRLYSLGLD 116
                 79**********987765 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 1.1e-06
      TPR_14   1 peallalaeallalGdpdeAiallrralalaPddaeawll 40 
                 p+a++++++ l + G+ d+Ai+  +ral     da++ +l
  KHJ34202.1 170 PKAWWRRGRCLVEMGRIDDAIDWIERALVIEGHDADLATL 209
                 78***************************99999877665 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.25   3.4e+02       3      15 ..     100     112 ..      98     118 .. 0.86
   2 ?   -2.3   0.0       4.9   6.8e+03      52      66 ..     135     149 ..     132     151 .. 0.71
   3 !   18.9   0.0   1.2e-06    0.0016      20      65 ..     165     210 ..     152     212 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.25
      TPR_19   3 aegdyaeAlalle 15 
                  +g+++eAl+l++
  KHJ34202.1 100 RQGKHTEALRLYS 112
                 79*******9996 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 4.9
      TPR_19  52 peedpddaryasLlA 66 
                  + +++ +++++Ll+
  KHJ34202.1 135 ANLYANRSQVHMLLQ 149
                 556677789999875 PP

  == domain 3  score: 18.9 bits;  conditional E-value: 1.2e-06
      TPR_19  20 edpknaearllLAeallalgqldeAealLdalpeedpddaryasLl 65 
                 ++ +n+ a+ +  ++l+++g++d+A++ +++++  +  da++a+Ll
  KHJ34202.1 165 KEVGNPKAWWRRGRCLVEMGRIDDAIDWIERALVIEGHDADLATLL 210
                 45579*****************************999999999997 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       1.4     2e+03       8      25 ..      95     112 ..      94     118 .. 0.75
   2 ?   -1.9   0.0       3.9   5.4e+03       1      15 [.     135     149 ..     135     150 .. 0.79
   3 !   14.9   0.0   1.7e-05     0.023       2      28 ..     171     197 ..     170     201 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.4
                 HHHHHHTT-HHHHHHHHH CS
       TPR_8   8 gsiylklgdyeeAkeyye 25 
                 g++ + +g++ eA   y 
  KHJ34202.1  95 GNTSFRQGKHTEALRLYS 112
                 667789999999987775 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 3.9
                 CCHHHHHHHHHHHTT CS
       TPR_8   1 aeayynlgsiylklg 15 
                 a +y n +++++ l+
  KHJ34202.1 135 ANLYANRSQVHMLLQ 149
                 568999999998776 PP

  == domain 3  score: 14.9 bits;  conditional E-value: 1.7e-05
                 CHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekal 28 
                 +a+++ g+++ ++g+++ A+ ++e+al
  KHJ34202.1 171 KAWWRRGRCLVEMGRIDDAIDWIERAL 197
                 79***********************98 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.0     0.018        25       6      23 ..      95     112 ..      91     122 .. 0.84
   2 !   10.2   0.0   0.00047      0.65       3      29 ..     174     200 ..     172     216 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.018
       TPR_7   6 arlysrlGdyeeAielye 23 
                 +++ +r+G++ eA++ly 
  KHJ34202.1  95 GNTSFRQGKHTEALRLYS 112
                 78889***********95 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00047
       TPR_7   3 lnLarlysrlGdyeeAielyeqsLalt 29 
                  + +r+ +++G+ ++Ai+  e++L+++
  KHJ34202.1 174 WRRGRCLVEMGRIDDAIDWIERALVIE 200
                 56799*****************88765 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.2   1.6e-05     0.022      28      68 ..     169     209 ..     142     213 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.6e-05
       TPR_9  28 dpeerrdRGlllaqlGclsaAladLeaylalapdapdaeai 68 
                  p  ++ RG++l+++G++  A++  e++l ++++++d +++
  KHJ34202.1 169 NPKAWWRRGRCLVEMGRIDDAIDWIERALVIEGHDADLATL 209
                 6889*************************999988776654 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0    0.0063       8.6       9      25 ..      95     111 ..      95     116 .. 0.92
   2 ?   -1.1   0.1       1.4   1.9e+03       2      31 ..     135     164 ..     134     167 .. 0.76
   3 ?    4.6   0.0     0.022        31      14      29 ..     182     197 ..     177     199 .. 0.88
   4 ?   -2.7   0.0       4.4     6e+03       8      18 ..     206     216 ..     205     218 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0063
      TPR_10   9 analrqrgrydeAeall 25 
                 +n+ +++g+++eA++l+
  KHJ34202.1  95 GNTSFRQGKHTEALRLY 111
                 78889**********97 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1.4
      TPR_10   2 AsslnNLanalrqrgrydeAealleealai 31 
                 A+ + N + ++  ++++ e   ++e ++++
  KHJ34202.1 135 ANLYANRSQVHMLLQNWPEGAIDAEASVEA 164
                 777888888888888888888888888776 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.022
      TPR_10  14 qrgrydeAealleeal 29 
                 ++gr d+A ++ e+al
  KHJ34202.1 182 EMGRIDDAIDWIERAL 197
                 79*************9 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 4.4
      TPR_10   8 Lanalrqrgry 18 
                 La +lr+++++
  KHJ34202.1 206 LATLLRETKKR 216
                 89999999887 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0    0.0091        13       1      18 [.      95     112 ..      95     116 .. 0.90
   2 ?    5.6   0.0    0.0093        13       1      24 [.     177     200 ..     169     206 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0091
      TPR_11   1 GdayyeqGkyeeAieaYk 18 
                 G+  + qGk +eA+  Y+
  KHJ34202.1  95 GNTSFRQGKHTEALRLYS 112
                 88899*********9996 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0093
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkld 24 
                 G+ ++e G++++Ai + ++Al + 
  KHJ34202.1 177 GRCLVEMGRIDDAIDWIERALVIE 200
                 566899**********99999886 PP

>> TPR_4  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.26   3.5e+02      12      23 ..      99     110 ..      95     111 .. 0.88
   2 ?    7.2   0.0    0.0066         9       3      26 .]     172     195 ..     170     195 .. 0.90

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.26
       TPR_4  12 lalGdldeAral 23 
                 +++G + eA++l
  KHJ34202.1  99 FRQGKHTEALRL 110
                 69********98 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0066
       TPR_4   3 allaLArallalGdldeAraller 26 
                 a + ++r l + G+ d+A ++ er
  KHJ34202.1 172 AWWRRGRCLVEMGRIDDAIDWIER 195
                 67889***************9997 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0      0.43   5.9e+02      11      23 ..      99     111 ..      93     112 .. 0.81
   2 ?    7.9   0.0    0.0037       5.1       2      21 ..     172     191 ..     171     197 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.43
                 HHHHHHHHHHHHH CS
       TPR_6  11 rklgdtdkAleal 23 
                 +++g++++Al+++
  KHJ34202.1  99 FRQGKHTEALRLY 111
                 6788******998 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0037
                 HHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAle 21 
                 A +++++++ ++g+ d+A++
  KHJ34202.1 172 AWWRRGRCLVEMGRIDDAID 191
                 899***************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       758  (0.0422779); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1660.48
//
Query:       KHJ34203.1  [L=161]
Description: putative ribonuclease h1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-20   74.3   0.0    1.4e-20   73.9   0.0    1.1  1  RNase_H   RNase H
      8e-07   28.9   0.0     0.0066   16.3   0.0    2.2  2  RVT_3     Reverse transcriptase-like


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.9   0.0   1.6e-24   1.4e-20       4     122 ..       5     142 ..       3     158 .. 0.74

  Alignments for each domain:
  == domain 1  score: 73.9 bits;  conditional E-value: 1.6e-24
                 EEEEEEEEEECTTTCE..EEEE.EECTT....EEEEEEEC..CCCHHHHHHHHHHHHHHH.TT.SC........SEEEEEES-HHHHHHHHCCCHHHHH CS
     RNase_H   4 vvvYtDGsclgnpgeg..gaga.vlykeg..arnisaple..eaqtnnraELsAvieaLk.alksd........ekvniytDSkYvvkgitqwvhrwkk 86 
                 + +Y+DG c+gn ++g  ga+a v++     + ++s  l+   + tn+raE++A+i aL+ al++          +v+i +DS+Y+++ +  wv++w +
  KHJ34203.1   5 MRIYVDGVCRGNGRPGsiGAAAaVFELPHgrQTTYSCILPsrPTPTNQRAEITAIIIALEeALERYerlrmapyLDVTIHSDSRYAIGCMRVWVQKWCQ 103
                 789*********999944444435533333334777666665889***************888777778888888899********************* PP

                 TTSSSETTSSBHTTHHHHHHHHHCHCS....SEEEEEE-S CS
     RNase_H  87 nawkttseqkpvknkdlaellkelakk....kkvqlkwvk 122
                 n+w +++    v nkdl++++++l +k     +v+  wv+
  KHJ34203.1 104 NGWINAAGR-AVANKDLIQKANRLDDKlrdlGSVEYVWVP 142
                 ***777666.7******99997665541111457777777 PP

>> RVT_3  Reverse transcriptase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   7.3e-07    0.0066      11      58 ..      21      69 ..       8      88 .. 0.83
   2 !   11.1   0.0   2.9e-05      0.26      83     124 .]     115     156 ..      89     156 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 7.3e-07
       RVT_3 11 gaggagvvirdsnGevllagaek.lqgkasveeAElqALlrGLqlalkl 58
                ++g+a++v+  ++G+ ++ ++    +++ +++ AE +A++++L+ al++
  KHJ34203.1 21 SIGAAAAVFELPHGRQTTYSCILpSRPTPTNQRAEITAIIIALEEALER 69
                35688899********999999889*********************986 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 2.9e-05
       RVT_3  83 ksselanlldeirkllksfesvsvehipReqNrvAdalAkra 124
                  +++l +  +   + l+ + sv+  ++pRe+N  Ad +++ a
  KHJ34203.1 115 ANKDLIQKANRLDDKLRDLGSVEYVWVPREENVDADEACNDA 156
                 666666666777777888999*****************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1263.16
//
Query:       KHJ34204.1  [L=82]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (82 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.23s 00:00:00.57 Elapsed: 00:00:00.36
# Mc/sec: 675.71
//
Query:       KHJ34205.1  [L=438]
Description: hypothetical protein EV44_g0289 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.2e-39  135.3   0.2    2.9e-39  134.9   0.2    1.2  1  RVT_1        Reverse transcriptase (RNA-dependent DNA polymer
  ------ inclusion threshold ------
      0.086   12.7   0.0       0.19   11.6   0.0    1.5  1  Phage-MuB_C  Mu B transposition protein, C terminal


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.9   0.2   3.2e-43   2.9e-39       7     221 ..       3     241 ..       1     242 [. 0.95

  Alignments for each domain:
  == domain 1  score: 134.9 bits;  conditional E-value: 3.2e-43
                 S-EEE......-THHHHCTB--...........-------HHHH................HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET.. CS
       RVT_1   7 gsyRpisllsvdykalnkliakrLkdvl..ekllsenqpgfrpgrstldav...edllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvptk 100
                 + yR+islls+++k+ ++++akrL+ ++  ++ll++ q g r  +s +da     + ++++++ ++ +  l+lD+k+aFd+v+ +++l +++++++pt+
  KHJ34205.1   3 KAYRVISLLSCLGKVSERILAKRLSYLVeiSQLLDPTQIGGRLTKSAVDAAlllINEVETNRQIRRVTSTLFLDVKGAFDHVSRNQILDQIKKIRLPTS 101
                 78***************************9*********************99977778889999********************************** PP

                 .......................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHH......HHHHHHHHHHHHHH CS
       RVT_1 101 linliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskee......lqelleaveewlke 193
                 li ++ sfl +r   +++nge+ +++  ++g+pqGs++SP+lf +++++l+   +       ++ Y+DDi i++ks +       l++ + ++ ++ ++
  KHJ34205.1 102 LISWVASFLDHRVLQLSFNGETESFKSAETGIPQGSPISPMLFLIYISDLFITQDV-----RCISYMDDIAISTKSTSLrkntktLEREVAKIYAKGSQ 195
                 *********************99****************************88886.....79*************88789999*************** PP

                 TT--BEGGG-EEE.......................ESSEEETTEE CS
       RVT_1 194 sglkinpeKtklvlft.................v.kseevkyLGvt 221
                 + +++   Kt+l++ft                    ++ v++LG++
  KHJ34205.1 196 NAIQFDLLKTELMHFTrskkadtwhvrlpddvvIaPTQLVRWLGIW 241
                 ****************999999999999998753799999999986 PP

>> Phage-MuB_C  Mu B transposition protein, C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.1e-05      0.19      27      73 ..     155     205 ..     148     207 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.1e-05
                  SSSHHHHHHHTTS..SS-S-HHHHHHHHG..GGT-TT-TTS--SSHHHHHH CS
  Phage-MuB_C  27 tdeelmkllqeia..ekpGaLRaltktLr..lAamfAkgegeeltadlira 73 
                  +d ++++++ +ia  +k   LR+ tktL   +A ++Akg++++++ dl+++
   KHJ34205.1 155 QDVRCISYMDDIAisTKSTSLRKNTKTLEreVAKIYAKGSQNAIQFDLLKT 205
                  6777888887654339************5459************9999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3393.00
//
Query:       KHJ34206.1  [L=256]
Description: putative formamidopyrimidine-dna glycosylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-21   73.7   0.0    1.8e-20   72.7   0.0    1.5  1  H2TH      Formamidopyrimidine-DNA glycosylase H2TH domain
     0.0087   16.2   3.0      0.013   15.6   3.0    1.2  1  CRA       Circumsporozoite-related antigen (CRA)
  ------ inclusion threshold ------
       0.01   14.6   0.4      0.017   13.9   0.4    1.5  1  FbpA      Fibronectin-binding protein A N-terminus (FbpA)
      0.026   14.7   0.2      0.051   13.7   0.2    1.5  1  Pox_A9    A9 protein conserved region


Domain annotation for each model (and alignments):
>> H2TH  Formamidopyrimidine-DNA glycosylase H2TH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.7   0.0   3.9e-24   1.8e-20       2      87 ..      54     141 ..      54     147 .. 0.89

  Alignments for each domain:
  == domain 1  score: 72.7 bits;  conditional E-value: 3.9e-24
                 --BTT..STTS-HHHHHHHHHT--SBHHHHHHCTTTSCS--HHHHHHHHHHTT--TTSBGGGS-HHHHHHHHHHHHHHHHHHHHTTTT CS
        H2TH   2 gpepl..seaftvdalaerlkkkkrkiktlLLDqklvaGlGNiyadEvLfrakihPerlakslskeelellhqeikevlkeaielgks 87 
                 gp+p   ++  +++ l+++l+ k+ +ik +LLDq++++G+GN+  dE+L+ akihPe+ + +ls e++++lh+ i+ v + a+ + ++
  KHJ34206.1  54 GPDPIidKSILSLEWLQSKLNCKHVHIKSFLLDQANISGIGNWVGDEILYNAKIHPEQYSDTLSVEQIKVLHHCIMYVCETAVGVLAD 141
                 78887334446788999*****************************************************************976555 PP

>> CRA  Circumsporozoite-related antigen (CRA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   3.0     3e-06     0.013      33      95 ..     154     253 ..     147     256 .] 0.86

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3e-06
         CRA  33 vwksrftkkkgkykknekevekaeeke.......................................deneedridvlkLikelekKeeeliivnKkkkk 92 
                 +w++ + +k  k  kn +  +++ +++                                       de++e+ +   + +++ +kK+ee  ++ K+k+ 
  KHJ34206.1 154 RWGKAMLTKTAKKRKNSEDSKEPTHEDpkclpngtkisfvtvggrtscfvpslqqkklqdklsndyDEENENLS--ENRLRKRVKKDEETLEIDKNKRT 250
                 79999999986666666666666665679*********************************998888888887..8899******************9 PP

         CRA  93 Yks 95 
                 ++s
  KHJ34206.1 251 LRS 253
                 987 PP

>> FbpA  Fibronectin-binding protein A N-terminus (FbpA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.4   3.8e-06     0.017     163     243 ..      51     136 ..      47     255 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.8e-06
                 XXSXBXTT.SXXH.H.HHHHHHHH.S.XXXHHHHHH..HBTTXXHHHHHHHHTTXSSSH...............HHHHHHHHTXXX CS
        FbpA 163 sqdklnPl.eaeele.efkellsk.kekdlvkaLvk..afqGlspllaeelleragldketsakelseedlerlyealqelleele 243
                 + ++++P  + + l+ e+ ++  + k  +++ +L++  +++G+++ +  e+l++a++ +e+  ++ls e+++ l++ ++ ++e   
  KHJ34206.1  51 KENGPDPIiDKSILSlEWLQSKLNcKHVHIKSFLLDqaNISGIGNWVGDEILYNAKIHPEQYSDTLSVEQIKVLHHCIMYVCETAV 136
                 56778888777777778887755579999999998522689***********************************9999888765 PP

>> Pox_A9  A9 protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.2   1.1e-05     0.051       2      15 ..     121     134 ..     120     137 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.1e-05
      Pox_A9   2 IdllrHlfMyfcEn 15 
                 I +l H++My+cE+
  KHJ34206.1 121 IKVLHHCIMYVCET 134
                 8899*********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1077  (0.0600703); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1936.79
//
Query:       KHJ34207.1  [L=365]
Description: putative initiation-specific alpha-mannosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-14   54.3   0.0    3.5e-14   53.2   0.0    1.5  1  Gly_transf_sug  Glycosyltransferase sugar-binding region cont


Domain annotation for each model (and alignments):
>> Gly_transf_sug  Glycosyltransferase sugar-binding region containing DXD motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.2   0.0     2e-18   3.5e-14       9      94 ..     111     190 ..     104     194 .. 0.89

  Alignments for each domain:
  == domain 1  score: 53.2 bits;  conditional E-value: 2e-18
  Gly_transf_sug   9 eslakahpdyqvvvlskelekvrvaildlefllsdtpwfeeakkllplfialsDllRlaiLykyGGiYlDtDvivlkslrnsigae 94 
                      s+ + hp++ + ++++++         ++ l+ + p++++a+ +lpl++ ++D++R++iL++ GGiY D+D++vlks   ++++e
      KHJ34207.1 111 ASWTELHPSFIHELITDQVA-----VHLIRHLYASIPEILDAYVSLPLPVLKADFFRYLILFARGGIYADIDTHVLKSA-IDWLPE 190
                     6999*************988.....5557888888999****************************************9.566555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (365 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       324  (0.0180713); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2787.31
//
Query:       KHJ34208.1  [L=124]
Description: putative atfpg-1 atfpg-2 atmmh-1 atmmh-2 fpg-1 fpg-2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-14   54.9   0.0    1.8e-14   54.4   0.0    1.2  1  Fapy_DNA_glyco  Formamidopyrimidine-DNA glycosylase N-termina
     0.0059   15.7   0.1      0.007   15.5   0.1    1.0  1  DUF2048         Abhydrolase domain containing 18


Domain annotation for each model (and alignments):
>> Fapy_DNA_glyco  Formamidopyrimidine-DNA glycosylase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.4   0.0     2e-18   1.8e-14       1      62 [.      43     108 ..      43     111 .. 0.98

  Alignments for each domain:
  == domain 1  score: 54.4 bits;  conditional E-value: 2e-18
                     X--HHHHHHHHHHHHHHHTT-EEEEEEE-SSHHHTS....THHHHHTT-.SEEEEEEEEETTEEEE CS
  Fapy_DNA_glyco   1 MPElpEVetvrrglrrhllgkkiakvevlkdktlrg....spaafakalkgrkiasvgrrGKylll 62 
                     MPE++EV+ v++++r++l+gk+i +v +++d++++g    ++a+f++a+k++ki ++g++GKy+++
      KHJ34208.1  43 MPEIAEVALVVHQIRKRLVGKTIRAVVAKDDANIFGkvgtTAAEFQNAMKEKKIIDAGQQGKYFWY 108
                     ***************************************9999**********************8 PP

>> DUF2048  Abhydrolase domain containing 18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   7.9e-07     0.007     240     335 ..       9     105 ..       5     112 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 7.9e-07
     DUF2048 240 rerlstasdaaaeekaakldeakerkaekealrfmrllmdelthlknfsvpkdtsliivvaAkdDayvpresva.slqeiwpgsevryldgGHvsay 335
                 r+ l+++++++++++++k  + +er++++e++r m   ++ ++ +++       + i +v+AkdDa +  +  +   +   +  e + +d+G    y
  KHJ34208.1   9 RHSLNFVEKTTYDSTSQKNLHSRERNQDREDIRDMPEIAEVALVVHQIRKRLVGKTIRAVVAKDDANIFGKVGTtAAEFQNAMKEKKIIDAGQQGKY 105
                 77899999************************************************************55544413333333445566777765555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       697  (0.0388756); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 918.34
//
Query:       KHJ34209.1  [L=325]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.6e-31  109.6  10.5      2e-31  109.3  10.5    1.1  1  SUR7          SUR7/PalI family
  ------ inclusion threshold ------
       0.53   10.3   7.2          3    7.9   1.5    2.6  2  Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C


Domain annotation for each model (and alignments):
>> SUR7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.3  10.5   2.2e-35     2e-31       1     207 [.       8     282 ..       8     287 .. 0.88

  Alignments for each domain:
  == domain 1  score: 109.3 bits;  conditional E-value: 2.2e-35
        SUR7   1 frlillflslaalilllfailgsiknstp.ltsiylskfdlsgldlaqi.................................................. 48 
                 ++l+++ l++a+++ +l ++l++i+n++  l  +  ++f+ s  +l +i                                                  
  KHJ34209.1   8 CVLLPMALTVASVVSILTVCLAGITNKSLqLFAVTTANFSASTATLDNIaheifrreaqltgipeiipslenqiknsrdivskisgvagdivdaktkfd 106
                 67899****************999555541444444444444333333366778********************************************* PP

        SUR7  49 ...............gladvysfgvwgyCdnsdvnytkCskpkagypfdpleelnsesngkvd......lPsnlrktlsklnnltkalfilhiialvls 126
                                glad+y++++w+yC     + t+C++p++++ ++ l+  n es+  ++      lP++++ +l+ + +++k   i +++al++ 
  KHJ34209.1 107 altsseggnitakvlGLADMYKVSIWNYC-RVTGTETNCTDPSYDWAANSLNTSNIESQASEAsgtkvtLPDEIKAALNSFVKISKLTQIAYMVALIFG 204
                 *****************************.99999***********99975333333333333457778****************************** PP

        SUR7 127 fislvvgllaicvspdnsrllsflnlllsvlsflatllaalldtllfvfvrkkin..lkefgikaslglkflafaWlalaaal 207
                  i++++g++a++     sr++s+l+ l+s ++++++++a++l+t+    v+ ++n   k +++k+++++ fla++Wla+a+++
  KHJ34209.1 205 GIEILFGFIAML-----SRAGSCLTYLVSGIATITITIASVLATVQASAVTAALNsaSKAYDVKSKINTGFLATTWLAVAFSI 282
                 ************.....999*************************************************************98 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.4     0.002        18      43     104 ..      24      84 ..      12     119 .. 0.66
   2 ?    7.9   1.5   0.00033         3      90     131 ..     219     260 ..     154     268 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.002
  Baculo_PEP_C  43 ietqLnalsedlksllaeldtrldtlltnLtdalnalqdtlrneLtnlnsiltnLlssvtNi 104
                   +   L  ++++  +l a  ++++++++++L++   ++    + +Lt++  i+ +L +++ N 
    KHJ34209.1  24 LTVCLAGITNKSLQLFAVTTANFSASTATLDNIAHEIF-RREAQLTGIPEIIPSLENQIKNS 84 
                   44455555555555666666666666666666666665.44677888888888888888774 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.00033
  Baculo_PEP_C  90 lnsiltnLlssvtNinstLnnllqalnnldlgalsqeledal 131
                     s lt L+s ++ i  t++++l+++++ +  a  + +++a 
    KHJ34209.1 219 AGSCLTYLVSGIATITITIASVLATVQASAVTAALNSASKAY 260
                   56889**********************998777777666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1194  (0.066596); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2227.55
//
Query:       KHJ34210.1  [L=897]
Description: hypothetical protein EV44_g4482 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (897 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 6219.58
//
Query:       KHJ34211.1  [L=313]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.9e-11   43.1   7.0    1.9e-10   40.9   7.0    2.0  1  Git3        G protein-coupled glucose receptor regulating Gpa
    0.00017   21.6   0.0    0.00055   20.0   0.0    1.9  1  GPR_Gpa2_C  G protein-coupled glucose receptor regulating Gpa
     0.0003   20.0   2.8    0.00043   19.5   2.8    1.2  1  Dicty_CAR   Slime mold cyclic AMP receptor


Domain annotation for each model (and alignments):
>> Git3  G protein-coupled glucose receptor regulating Gpa2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   7.0   3.1e-14   1.9e-10      74     201 ..       2     119 ..       1     120 [. 0.87

  Alignments for each domain:
  == domain 1  score: 40.9 bits;  conditional E-value: 3.1e-14
        Git3  74 fcqvvGfflavaiegsdlailllavhtallvfkpnlrnkksknvegGLykyrkyvyvisv.lvplllasLafin...akregYkplsawcylpeepvwy 168
                 +c ++G ++++++ +s+l++l++a+ht+  ++                  + ++ +v+ v l++ ++ +La i+     +  ++p++awc++ ++    
  KHJ34211.1   2 ICDTQGLLIQIGDVASGLWALAIALHTFFNIVGQ--------------KNIAHRTFVTLVlLLWSFILILAAIGpirGSEDFFVPAGAWCWVNNHNHTE 86 
                 699***************************9987..............2345556665555788888888888765467788***************** PP

        Git3 169 rlvlswiprYiivvaivaiyisiyiyvrreikk 201
                 rl  ++ ++++  +  va+y+++++y+r +ik+
  KHJ34211.1  87 RLYFHYLWIFASELGSVALYTFMFYYLRIRIKT 119
                 ****************************99985 PP

>> GPR_Gpa2_C  G protein-coupled glucose receptor regulating Gpa2 C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   9.2e-08   0.00055       3      71 ..     169     234 ..     167     237 .. 0.81

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 9.2e-08
  GPR_Gpa2_C   3 rrkqierqlrsifiYPlaYiilwlfPfvahvlqydyelkekpviwllvvaavvqplnglVDtlvfllre 71 
                 +r+ i +  r + iY laY+ l l P++a +        ++p i  +  a + ++ +g+VD+ +++ ++
  KHJ34211.1 169 SRTYILKSSRHMVIYTLAYLTLTL-PLAAGRALNM--VGKEPPIGYFTAAGILIACSGFVDVTLYVGTR 234
                 5777888899**************.9999876544..4555557788888999999********98665 PP

>> Dicty_CAR  Slime mold cyclic AMP receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   2.8   7.1e-08   0.00043      76     169 ..       3      99 ..       1     124 [. 0.77

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 7.1e-08
   Dicty_CAR  76 cylyaivitygslacwlwtlclalsiynlivkrepepekfekyyfvlcwglplisti...vmlskkvievvgnwcwigekyvgyrfglfygpfliiw 169
                 c    + i  g +a  lw+l +al  +  iv ++    +      +l w++ li +    +  s++   + g+wcw++++  + r+ + y  +++  
  KHJ34211.1   3 CDTQGLLIQIGDVASGLWALAIALHTFFNIVGQKNIAHRTFVTLVLLLWSFILILAAigpIRGSEDFFVPAGAWCWVNNHNHTERLYFHYLWIFASE 99 
                 666678999****************9999999998888888888899999999987613346799999************99999877776555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       667  (0.0372023); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2288.33
//
Query:       KHJ34212.1  [L=544]
Description: putative serine threonine-protein phosphatase pp-z [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-37  129.4   0.2    3.8e-37  128.8   0.2    1.3  1  Metallophos  Calcineurin-like phosphoesterase
    1.3e-15   57.6   0.0    2.5e-15   56.6   0.0    1.5  1  STPPase_N    Serine-threonine protein phosphatase N-terminal 
  ------ inclusion threshold ------
      0.072   13.3   0.0       0.83    9.9   0.0    2.3  2  MutS_I       MutS domain I


Domain annotation for each model (and alignments):
>> Metallophos  Calcineurin-like phosphoesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.8   0.2   6.4e-41   3.8e-37       2     201 ..     271     462 ..     270     465 .. 0.92

  Alignments for each domain:
  == domain 1  score: 128.8 bits;  conditional E-value: 6.4e-41
                  EEEEEESBTBTTCCTHHHHHHHHHHHH..HHHTTESEEEEESTSSSSSHHHHHHHHH.HHHHHHHTSEEEEEC-TTS........CHHHHHHHHHHHH CS
  Metallophos   2 rilvigDlHlalgggqlddllkllddl..lreekpdlvllaGDlvdrgdlekellel.laalvkypipvylllGNHe........gfeeellnkygyl 88 
                  ++ ++gD+H     gq+ dl+++++ +  ++ + ++l+l  GD+vdrg  + e++ l l++++kyp +++ll+GNHe        gf++e++++    
   KHJ34212.1 271 PVKIVGDIH-----GQYTDLIRMFEMCgfPP-NANYLFL--GDYVDRGKQSLETILLlLCYKIKYPENFFLLRGNHEcanvtrvyGFYDECKRRTN-- 358
                  5789*****.....************96333.4779999..*******6666666666************************************66.. PP

                  HHHHHHHEHHHCEEETSEEEEEETTEEEEEEEESE.CEEETHHHHHHHHHHHSCHHHHCC...HHHHHHHHHHTTCSEEEEEESSESSCSSSCSCCHH CS
  Metallophos  89 gifsepwrsdaevfnnlplaslgsgslkvlllhGg.spellvsldklgslnleleapepg...dewlkdlekrekadwvivlgHsplyrgsgylfgde 182
                      ++w+++ ++fn+lp+a+++ g  k++++hGg sp l v+ d+++++ +++++p+ g   d++++d       + + +  + + +rg +y+fg +
   KHJ34212.1 359 ---VKIWKNFIDTFNCLPIAAIVAG--KIFCVHGGlSPAL-VHMDDIRNIIRPTDVPDFGllnDLLWSD-------PAKQTREWENSERGVSYSFGKK 443
                  ...99********************..********76666.****************************.......999999999999********** PP

                  HHHHHHHHTTESEEEEESS CS
  Metallophos 183 aledllkkygvdlvisGHt 201
                  ++ d+l+k++ dlv+++H 
   KHJ34212.1 444 VITDFLFKHDFDLVCRAHM 462
                  ******************7 PP

>> STPPase_N  Serine-threonine protein phosphatase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.6   0.0   4.2e-19   2.5e-15       1      47 [.     221     268 ..     221     269 .. 0.93

  Alignments for each domain:
  == domain 1  score: 56.6 bits;  conditional E-value: 4.2e-19
   STPPase_N   1 vDdiIerLlevrg..kpggkkvqLseaEIrqlCakareiFLsQPtLLeL 47 
                 vD++I+rLl+ ++  k+  k+v+L++aEI  +Ca+are+FL+QP L+eL
  KHJ34212.1 221 VDEYIKRLLDTGYdgKHT-KTVCLKNAEIVTICARARELFLEQPPLIEL 268
                 8************85554.9999*************************9 PP

>> MutS_I  MutS domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00014      0.83      46      78 ..     203     233 ..     192     240 .. 0.80
   2 ?    0.4   0.0      0.12   7.5e+02      55      77 ..     287     310 ..     273     312 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00014
                 TT.ESSSSC.EEEEEEEHHHHHHHHHHHHHTT- CS
      MutS_I  46 tkrkkssekeipmagvPehalekylrkLvekgy 78 
                 t  +++s+ +i+m+ ++e  +++y+++L++ gy
  KHJ34212.1 203 T--SSHSKYHISMSDISEADVDEYIKRLLDTGY 233
                 3..3445555*********************99 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.12
                 ..EEEEEEEHHHHHHHHHHHHHTT CS
      MutS_I  55 e.ipmagvPehalekylrkLvekg 77 
                 + ++m+g+P +a   +l + v++g
  KHJ34212.1 287 RmFEMCGFPPNANYLFLGDYVDRG 310
                 336778888777666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       353  (0.0196888); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 4108.89
//
Query:       KHJ34213.1  [L=189]
Description: putative nudix domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-17   61.8   0.0    9.1e-17   61.3   0.0    1.1  1  NUDIX     NUDIX domain
    8.5e-05   22.5   0.0    0.00016   21.7   0.0    1.4  1  NUDIX_4   NUDIX domain


Domain annotation for each model (and alignments):
>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.3   0.0     1e-20   9.1e-17       7     120 ..      48     163 ..      44     174 .. 0.74

  Alignments for each domain:
  == domain 1  score: 61.3 bits;  conditional E-value: 1e-20
                 EEEEEETTSEEEEEEES.SSSTTT.EESSEEECBTTS.HHHHHHHHHHHHHHSEEE.EEEEEEEEEEEEEEEEEEEEEEEEEEEEEE..EEECSGCSST CS
       NUDIX   7 gvvllnekgevLlvrrs.kkpfpg.WelPgGkvepgE.tpeeAArREleEEtGlea.ellellgrlhylapydgpygdeheilyvfl..eevegelepn 99 
                 g++ l++ g++L+v+r+  + +pg We+PgG +e++  ++ + ++RE++EEtG  +   + +l++  + ++++ +   ++++ + f    e+  ++++n
  KHJ34213.1  48 GAFTLDNMGRILVVQRAdTDSWPGrWEIPGGACEANNeSVLDGMVREMWEETGMVVtSVVGVLNDQGKSFTTRSR---KRFLKFEFKveIELPNKIKLN 143
                 7888899999*******9999999**********9777***************7666888999844443333332...444444444335555555555 PP

                 STTTEEEEEEEEHHHHHHHHT CS
       NUDIX 100 denevsevrwvpleellkekl 120
                  ++e++++ w++ ee++  k 
  KHJ34213.1 144 -PAEHKAFMWITEEEFNSGKK 163
                 .**************933322 PP

>> NUDIX_4  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0   1.7e-08   0.00016       7      95 ..      53     158 ..      48     162 .. 0.52

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 1.7e-08
                 EC.TEEEEEE--TTSSSTT-EE-SEEE.-TTS-.HHHHHH...HHHHS-EEE........EEEE..EEEEEEETTEEEEEEEEEE..EEE.S..---EE CS
     NUDIX_4   7 dd.grvllekRpekgllggLwefPgge.eegee.leeala...reelgieve........elep..gtvkHvftHfrltltvylv..rveegeeapael 87 
                 d+ gr+l+ +R +++ + g we+Pgg  e+++e + + ++    ee+g+ v+        + +    + +  f  f+ ++++  +  +++ ++++ +++
  KHJ34213.1  53 DNmGRILVVQRADTDSWPGRWEIPGGAcEANNEsVLDGMVremWEETGMVVTsvvgvlndQGKSftTRSRKRFLKFEFKVEIE-LpnKIKLNPAEHKAF 150
                 455*********************98864443323332222333466653333344222211112222334454444444432.234333223333367 PP

                 EEEEGGGG CS
     NUDIX_4  88 rwvtpeel 95 
                  w+t+ee+
  KHJ34213.1 151 MWITEEEF 158
                 77777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (189 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1437.25
//
Query:       KHJ34214.1  [L=224]
Description: hypothetical protein EV44_g3473 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1674.12
//
Query:       KHJ34215.1  [L=458]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3341.42
//
Query:       KHJ34216.1  [L=262]
Description: putative ubiquitin carboxyl-terminal hydrolase isozyme l3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-52  176.5   0.0    6.6e-52  176.3   0.0    1.0  1  Peptidase_C12  Ubiquitin carboxyl-terminal hydrolase, family 


Domain annotation for each model (and alignments):
>> Peptidase_C12  Ubiquitin carboxyl-terminal hydrolase, family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.3   0.0   3.7e-56   6.6e-52       1     200 [.      20     223 ..      20     234 .. 0.90

  Alignments for each domain:
  == domain 1  score: 176.3 bits;  conditional E-value: 3.7e-56
                    ---EE--HHHHHHHHHHHT--S...EEEE--S.SH.HHTTS-..--EEEEEEE.----------..---------..T...TS------STTGHHH CS
  Peptidase_C12   1 wlplEsdPevftelleklGvkg.vqfeevysldde.llaslp..vyglillfkyieeeeeeeer.ekeeeekdeeeeevsekvfFakQtiqnaCgt 91 
                    ++p+E++Pev+++l+++lG+++ ++f +v+s+dd  lla++p    +l+l+f+ ++e+ +++ r ++++++ d++++e++e+v+++kQti n+Cg 
     KHJ34216.1  20 FVPIENNPEVMSTLIHRLGLSSeLSFYDVFSIDDAdLLAFIPrpAFALLLVFP-VSEA-YKKFRlKEDQDNPDNDAKETKESVIWYKQTIVNSCGI 113
                    79******************************9999*****556*********.8777.888885555555788888999**************** PP

                    HHHHHHHHH..STS--.-TTSHHHHHHHHHTTS-HHHHHHHHHT-HHHHHHHTTSC..---SSTHHHHS--EEEEEEEEE.TTEEEEE-TTS.S-E CS
  Peptidase_C12  92 iAlLhvllNlekeaeeielgseLkkfkeftkelspeergealenseeireahnsfasegqteapeeeedvafHFiafvpv.ngklyeLDGlkegPi 186
                    +A+Lh+  N + + + i+ gs L+++++++  l p er++++ + e +++ah+ +a +gq+ ap++e+d+++H+++f++  ++ l+eLDG ++gP+
     KHJ34216.1 114 MAILHAASNGD-SRKFISSGSPLDNLIKQALPLGPIERADLIYDFEALETAHHDAAYQGQSCAPSAEDDIDLHYVCFTKDkDNVLWELDGQRKGPL 208
                    *********87.57888**************************************************************75899************ PP

                    EEEE--T..TTH..HH CS
  Peptidase_C12 187 dlgeveeeeedl..ed 200
                    ++g++ +e +dl  e+
     KHJ34216.1 209 NRGNLGPE-DDLlsEK 223
                    *****665.5553433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1929.09
//
Query:       KHJ34217.1  [L=248]
Description: putative pyridoxamine 5 -phosphate oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-20   72.8   1.5    1.7e-20   72.8   1.5    2.7  3  PNP_phzG_C       Pyridoxine 5'-phosphate oxidase C-terminal d
    4.1e-15   55.7   0.0    6.6e-15   55.1   0.0    1.3  1  Putative_PNPOx   Pyridoxamine 5'-phosphate oxidase
     0.0011   19.5   0.6     0.0054   17.3   0.2    2.3  2  Pyridox_oxase_2  Pyridoxamine 5'-phosphate oxidase


Domain annotation for each model (and alignments):
>> PNP_phzG_C  Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.43   2.6e+03      34      36 ..     125     127 ..      89     143 .. 0.47
   2 ?   -0.3   0.0      0.19   1.1e+03      14      26 ..     171     184 ..     161     192 .. 0.63
   3 !   72.8   1.5   2.8e-24   1.7e-20       1      43 []     208     248 .]     208     248 .] 0.97

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.43
  PNP_phzG_C  34 gkW 36 
                 +kW
  KHJ34217.1 125 NKW 127
                 445 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.19
  PNP_phzG_C  14 Wqg.rpsRlHdRfr 26 
                 W + +++ +HdR +
  KHJ34217.1 171 WASkQSQSIHDRNV 184
                 64404456899965 PP

  == domain 3  score: 72.8 bits;  conditional E-value: 2.8e-24
  PNP_phzG_C   1 WgGyrvvPeeiEFWqgrpsRlHdRfrYereeedgkWkierLsP 43 
                 WgG+r+ Pe iEFWqgr +RlHdRf+Y+r+   ++WkierLsP
  KHJ34217.1 208 WGGLRILPEMIEFWQGRDNRLHDRFQYTRTA--ENWKIERLSP 248
                 ****************************988..68*******9 PP

>> Putative_PNPOx  Pyridoxamine 5'-phosphate oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.1   0.0   1.1e-18   6.6e-15      12      88 .]      77     154 ..      62     154 .. 0.92

  Alignments for each domain:
  == domain 1  score: 55.1 bits;  conditional E-value: 1.1e-18
                     SSEEEEEEEE.TTSEEEEEEEEEEEETTTTEEEEEEETTS.HHHHHHHHH-EEEEEEEETTGSEEEEEEEEEEEESCHH CS
  Putative_PNPOx  12 skavvlATvd.edGrPnvspvllkagdgrdgivfatnads.rklrnleenprvallflddelgrgvrieGtaelvsdge 88 
                     +++v+l+T++ ++Gr+++++v lk++d + g+++++n  + +k ++le+n  ++l+f+++e++r++rieG  e ++ +e
      KHJ34217.1  77 PETVCLSTASlPSGRVSGRMVYLKELDLK-GFIIYSNFGTsKKSKDLEKNKWASLTFWWPEQERQIRIEGLTERLTTEE 154
                     589*******9******************.9999999987799***************************999988765 PP

>> Pyridox_oxase_2  Pyridoxamine 5'-phosphate oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.2     9e-07    0.0054      63      95 ..     115     146 ..      30     151 .. 0.83
   2 ?    0.0   0.0      0.22   1.3e+03      53      73 ..     154     174 ..     146     196 .. 0.71

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 9e-07
                      TSHHHHHHH.H--EEEEEEEETTTTEEEEEEEE CS
  Pyridox_oxase_2  63 rseKvkqlessnaaveavfylketreQfRisGk 95 
                       s+K k+le +n+++ + f+ +e+++Q+Ri+G 
       KHJ34217.1 115 TSKKSKDLE-KNKWASLTFWWPEQERQIRIEGL 146
                      58999****.9********************95 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.22
                      S-.EEEEEETTSHHHHHHH.H CS
  Pyridox_oxase_2  53 sdvltfttDvrseKvkqless 73 
                      ++ + f+t +r +K+   +s+
       KHJ34217.1 154 ESQIYFNTRIRGSKIGAWASK 174
                      444899999999999988753 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1913.21
//
Query:       KHJ34218.1  [L=334]
Description: putative short chain dehydrogenase reductase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-19   70.4   0.0    1.7e-19   70.0   0.0    1.1  1  adh_short      short chain dehydrogenase
    6.5e-13   48.8   0.0      8e-13   48.5   0.0    1.1  1  adh_short_C2   Enoyl-(Acyl carrier protein) reductase
  ------ inclusion threshold ------
      0.045   12.8   0.0      0.063   12.4   0.0    1.1  1  RmlD_sub_bind  RmlD substrate binding domain


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.0   0.0   2.9e-23   1.7e-19       2     182 ..      25     201 ..      24     212 .. 0.93

  Alignments for each domain:
  == domain 1  score: 70.0 bits;  conditional E-value: 2.9e-23
                 EEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGCSHHH CS
   adh_short   2 vvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfselseee 100
                 v ++ Gass +Gr +ak +++++  +v+v+ ++ +  e +   ++    a+   +Dv+ +++ve++++ a + + +++++vn++    +g+ ++ se e
  KHJ34218.1  25 VWIIFGASSQMGRSLAKFCIESNDLIVAVGCKSGDTLESMPVWHN----AVNTVCDVRCYSSVEKVISLALSYYNRINLVVNCVEYGVMGACEDQSEFE 119
                 6699********************999988887777555555554....899**********************************99*********** PP

                 HHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB CS
   adh_short 101 wervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlv 182
                  ++  e+N++g++++++  lp++ kq +G+ +    + g  + +g+ ++ AsK av+gl +s+  e+++ +i+v+ + +G +
  KHJ34218.1 120 LRKQQEINFMGTLHIIQVSLPYFRKQGAGKFIVYNTTPGALGTPGLGPFFASKYAVEGLLESMLYEVHQFNIKVSLLECGWL 201
                 ****************************************************************************999975 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.5   0.0   1.3e-16     8e-13       1     181 [.      30     208 ..      30     231 .. 0.85

  Alignments for each domain:
  == domain 1  score: 48.5 bits;  conditional E-value: 1.3e-16
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTTSEE.EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHHHH CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneeakkrveelaeelgaev.lecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsreefd 96 
                   Ga s +Gr +Ak + e    +v++  +  +  ++e++     ++v   cDV+  ++ve++++ + + +++++ +vn++ +     g +++ s+ e++
    KHJ34218.1  30 GASSQMGRSLAKFCIESNDLIVAVGCKSGD--TLESMPV-WHNAVnTVCDVRCYSSVEKVISLALSYYNRINLVVNCVEYGVM--GACEDQSEFELR 121
                   677778888888888877777777776665..4444444.4455569**********************************99..************ PP

                   HHHHHHTHHHHHHHHHHHHHCTSC..CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGG CS
  adh_short_C2  97 raldvnlyslfllakaalplmkeg..gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasg 181
                   + +++n+ +++++++  lp+++++  g+ +    + +  ++p+     a+K a+e+l  ++ +e+ + +i+v     g++  ++ ++
    KHJ34218.1 122 KQQEINFMGTLHIIQVSLPYFRKQgaGKFIVYNTTPGALGTPGLGPFFASKYAVEGLLESMLYEVHQFNIKVSLLECGWLGEDSFDR 208
                   *******************9988879999999999999***********************************99999987766554 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   1.1e-05     0.063       3      85 ..      26     134 ..      24     141 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.1e-05
                    EEEESTTSHHHHHHHHHCTTTSEEEEEE-TT.................T--TTSHHHHHHHH.....HHH--SEEEE------HHHHHHSHH.... CS
  RmlD_sub_bind   3 ilvtGanGqlGseLakqlaeeglevlaltre.................eldltdaeavaell.....keakpdvvvnaAAytavDkaEseee.... 72 
                    ++++Ga+ q+G+ Lak   e++  ++a++ +                  +d++  ++v++++       ++ ++vvn+  y  + ++E+++e    
     KHJ34218.1  26 WIIFGASSQMGRSLAKFCIESNDLIVAVGCKsgdtlesmpvwhnavntVCDVRCYSSVEKVIslalsYYNRINLVVNCVEYGVMGACEDQSEfelr 121
                    579****************99999999977778*************9999**********9966666567899*********99999988652222 PP

                    HHHHHHTHHHHHH CS
  RmlD_sub_bind  73 aayavnaeaveal 85 
                    +++++n  ++ ++
     KHJ34218.1 122 KQQEINFMGTLHI 134
                    6778888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 2784.95
//
Query:       KHJ34219.1  [L=407]
Description: hypothetical protein EV44_g3468 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       703  (0.0392102); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.20s 00:00:00.70 Elapsed: 00:00:00.36
# Mc/sec: 3410.46
//
Query:       KHJ34220.1  [L=682]
Description: putative ring finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (682 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       959  (0.0534888); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.23s 00:00:00.82 Elapsed: 00:00:00.39
# Mc/sec: 5245.82
//
Query:       KHJ34221.1  [L=416]
Description: putative mob1 phocein family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.7e-24   84.6   0.0    1.2e-23   83.9   0.0    1.2  1  Mob1_phocein  Mob1/phocein family
  ------ inclusion threshold ------
      0.064   13.5   3.5       0.13   12.5   3.5    1.5  1  CxC6          CxC6 like cysteine cluster associated with KDZ 


Domain annotation for each model (and alignments):
>> Mob1_phocein  Mob1/phocein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.9   0.0   1.4e-27   1.2e-23       9     166 ..     107     269 ..     101     272 .. 0.86

  Alignments for each domain:
  == domain 1  score: 83.9 bits;  conditional E-value: 1.4e-27
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxx RF
  Mob1_phocein   9 lkeavklPkgedlneWlavhvvdffnein.llygtis..efcteqscptmsagpkyeYlwadeevkkpvklsApeYidllmdwiesqlnd..lfpsk 100
                    + +++ P+++d+  Wl++ ++ ++n+ n l++g+i     c++++cp+m+a  ++++l+a +  + p +++A++Y+ +++dw++s +++  lfps+
    KHJ34221.1 107 AQLLCNPPSDVDKTLWLYELCRLLINKCNdLIVGFIFdtPPCSASTCPEMRAS-EWQFLCAVH--ESPKSCCAIDYCCHTLDWATSIVTSqkLFPSR 200
                   567899**********************9556788762358***********7.8*******7..68999**********************66666 PP

                   xx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Mob1_phocein 101 ag......spfpknflkvvkkilkrlfrvyaHiYihHfeeiaeleleahlntcfkhfvlfvkeFkLidkkel 166
                    +      ++  +   +++ +i++rl r++aH++++H++ + ++e+++ l t+   f +++++++L+ ++++
    KHJ34221.1 201 LSfgtgdmVAEGNAGVRHLANIFRRLHRIFAHAWFQHRQVFWSVESSTGLYTL---FKVVCDTYDLMPAENY 269
                   654443325545567899***********************************...67999*****998876 PP

>> CxC6  CxC6 like cysteine cluster associated with KDZ transposases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   3.5   1.5e-05      0.13       9      46 ..     145     182 ..     140     195 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.5e-05
        CxC6   9 hpcCavhdCtepLennrdrFCaeHeelekiCavqgCen 46 
                  p C++++C e+ ++  +  Ca He+ ++ Ca++ C +
  KHJ34221.1 145 TPPCSASTCPEMRASEWQFLCAVHESPKSCCAIDYCCH 182
                 578************99*****************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       643  (0.0358637); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3153.44
//
Query:       KHJ34222.1  [L=354]
Description: hypothetical protein EV44_g6437 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       344  (0.0191868); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2612.12
//
Query:       KHJ34223.1  [L=697]
Description: putative long-chain-fatty-acid- ligase 1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-90  303.1   0.0    3.6e-90  302.6   0.0    1.1  1  AMP-binding    AMP-binding enzyme
    0.00055   20.9   0.1     0.0016   19.4   0.1    1.8  1  AMP-binding_C  AMP-binding enzyme C-terminal domain


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  302.6   0.0   4.1e-94   3.6e-90      16     422 ..     105     561 ..      91     561 .. 0.83

  Alignments for each domain:
  == domain 1  score: 302.6 bits;  conditional E-value: 4.1e-94
                  E.CCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEEEETCTCCCHHHHHH CS
  AMP-binding  16 d.sgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseakvliatvdselleklle 112
                  +   +++ +++ ++++ + +l+ag+r++G++k+drV i++ +s+ w+ +++++ + ++ +v+ ++tl++e l++ l++++ak+++   d +ll+ l +
   KHJ34223.1 105 FeMSGYEYISFYDFEQMALELGAGFRKIGLQKDDRVHIFAATSANWLGTAHGAISQSMPIVTTYDTLGEEGLSHSLKATKAKAIF--LDPHLLPILIN 200
                  344579*******************************************************************************..88888777777 PP

                  HHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS...............-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHHHHH CS
  AMP-binding 113 aaakleavklvivldadellkeeelkeeeeseekae...............kpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslklet 195
                    +++++    ++  +++  ++++ ++ ++++e  +               +p+ +++++p+dl++i+YTSG+TG PKGV ++h+++va++a +++  
   KHJ34223.1 201 PLKEVDVDIRYVIWNSQNEVEQKNIDKLKQARE--DiliisleelrqlgkeNPVAPVRPSPEDLCCIMYTSGSTGPPKGVPIKHKAVVASIAGVSFIV 296
                  776666666666665555444434333333332..24567788899999998889999***********************************99776 PP

                  CSCCTTT-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCH..HHHHHHHHHHHT-SEEEEEHHHHHHH..............HHCCCHHCHH CS
  AMP-binding 196 rfklkeddvvlsilplahifglilelllallsGatvvllpkdaald..pklllelieklkvtviagvPrvleal..............lesgalkaak 277
                  +  ++e+d+vl++lplahi+++ +++++al++G t+++ ++++  d   + ++++i++lk++++ gvP+v+e +              +         
   KHJ34223.1 297 DPYVTEGDKVLTYLPLAHILEF-VFENAALYWGTTLGYGNPKTLSDisMRNCHGDIRELKPNILIGVPAVWENIkkgilnkinasnllV--------- 384
                  777889***************9.*****************999977788999**********************777754433322221......... PP

                  HHC..................................CGTT.-SEEEEESS-EBHHHHHHHHHHHTCEEEEEEEEGGGSSECEECHCTTTCTSTTS-B CS
  AMP-binding 278 kak..................................dlss.lrlvllggeplspellrffralfgeevlegYGlTEttgvvtvlpleedkkklgsvG 340
                    k                                    ++ lrl+l gg+p+s++++ f++  +  ++++gYGlTEtt++ + +++++++++  s G
   KHJ34223.1 385 --KslfytslwlkniilqndlpglkildaivfnkirqATGGnLRLCLNGGGPISKDTQWFISMALT-PLINGYGLTETTAMGA-VMDPREWNV-DSLG 477
                  ..0335555677777777766666666666666666655567999************988877776.5**************9.665677655.79** PP

                  EE-TTEEEEEE-TTTSCBEETTSE...EEEEEEETTS-SEBTT-HHHHHHHEEETCCEEEEEEEEEEETTSEEEEEEECCCEEEE CS
  AMP-binding 341 kplpgvevkivDeetgepvpdgee...GellvrgpgvmkgYlkkpeataeafdsegrwlrTGDlgrldedGyleivgRkkdlikl 422
                       +e+k+vD ++ ++++++ +   Ge+++rg  vm+gY+ ++e+t+++++ +++w++TGD+g++ e+G+l+i++Rkk+l+k+
   KHJ34223.1 478 SLPGSIEIKLVDYSEAGYFATNRPnpqGEIWIRGTPVMEGYYLDEEETKKTIT-PDGWFKTGDIGEWVENGHLKIIDRKKNLVKT 561
                  9988***************95555555*************************9.767**************************96 PP

>> AMP-binding_C  AMP-binding enzyme C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.1   1.8e-07    0.0016       1      69 [.     571     638 ..     571     644 .. 0.68

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.8e-07
                    HHHHHHHSSTTEEEEEEE-----TTS---EEEEEE------HHHHHHHHHHH......HT-TTTS-SEEE.E-.S-- CS
  AMP-binding_C   1 evEsalvshpaVaeaaVvGvpdevkGealvafVvlkdgsealeeeLkahvrk......elgpyavpkkvv.fv.del 69 
                    ++Es++ +   Va+++V+++p+      +va++v+  g+     +Lk+ + +       ++++ ++k+v  fv ++l
     KHJ34223.1 571 KLESIYRAANVVANICVYADPNR---TKPVAIIVP--GE----PALKKLASSnnvdgvGVEDLSRNKEVQdFVlKQL 638
                    58*********************...99*******..64....3444444333333345555555555555554444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (697 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.22s 00:00:00.83 Elapsed: 00:00:00.39
# Mc/sec: 5348.69
//
Query:       KHJ34224.1  [L=322]
Description: putative enoyl- hydratase isomerase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.3e-39  133.2   0.0    4.2e-24   85.2   0.0    2.0  2  ECH_1     Enoyl-CoA hydratase/isomerase
    3.6e-33  115.5   0.0    5.2e-28   98.5   0.0    2.5  2  ECH_2     Enoyl-CoA hydratase/isomerase


Domain annotation for each model (and alignments):
>> ECH_1  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.1   0.0   4.1e-16   3.6e-12       6      75 ..      47     118 ..      46     137 .. 0.88
   2 !   85.2   0.0   4.7e-28   4.2e-24      76     249 ..     145     320 ..     131     321 .. 0.96

  Alignments for each domain:
  == domain 1  score: 46.1 bits;  conditional E-value: 4.1e-16
                 EEEEEE--CGCTTEE-HHHHHHHHHHHHHHHHSTTECEEEEEE.BTSEEEEEB-HHHHHHHHC.HHHHHHHC CS
       ECH_1   6 vaviklnrPeavNalsaelltEliqalekleddksvravvLtG.gdkaFaaGadlkemaeeek.akqallke 75 
                 v  + +nrPe++N++ +++  El   +  l    +vr++vL G gd+aF+ G d+k++++++   kq+++ +
  KHJ34224.1  47 VTHVEINRPEKLNSFHKAMWMELETIFDALSLASNVRVIVLSGaGDRAFCTGIDIKAALQGGIlGKQKTPAS 118
                 67899******************************************************9987766665544 PP

  == domain 2  score: 85.2 bits;  conditional E-value: 4.7e-28
                 CHHHHHHHHHHSSSEEEEEE-SEEETHHHHHHHHSSEEEEETTTEEE-GGGGGTS--CTTCHHHHHHHHH.HHHHHHHHHHT-EEEHHHHHHCTSSSEE CS
       ECH_1  76 evlelwtklytvpkpviaavnGaaigGGlelalacDiviaadnasfglnelklGlipgaggtqilarkvG.kskAeeilllgkkisaqealkvGlvdkv 173
                 e+++  + +  ++kpvi  + G+ +g G+ +  ++Di+ ++++a+f+ +e+ +Gl ++ g   +l++ vG +s ++ + l ++ + a+eal+vG v+++
  KHJ34224.1 145 EFQKCVSSIERCEKPVICVLHGFTFGLGIDISACADIRLCSEDAKFAVKEVDIGLAADIGTLSRLPKLVGsFSWVKDVSLSARFFLANEALRVGFVSQI 243
                 67888999**************************************************************5599************************* PP

                 ESG.GGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTSHHHHHHHHHHHTCSH---- CS
       ECH_1 174 vpe.eqlleealelaeklaekspaalrqlkealnakledalaeqleaeaklfestfskddikeGlqaflEkrkpefe 249
                 + +  + l+ea  + + la+ksp a++  ke ln++ ++  a  l+      ++ +++dd+ e+l +   kr p+fe
  KHJ34224.1 244 LQNkVEALSEAFRMGQLLASKSPIAIQGTKELLNHARDHSIADSLQYTGVWNSAAIQTDDVYESLMSIDKKRSPKFE 320
                 *98799*************************************************************999*****98 PP

>> ECH_2  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.5   0.0   5.8e-32   5.2e-28       2     182 ..      48     253 ..      47     258 .. 0.85
   2 !   15.3   0.0   1.2e-06     0.011     249     318 ..     254     320 ..     239     321 .. 0.86

  Alignments for each domain:
  == domain 1  score: 98.5 bits;  conditional E-value: 5.8e-32
                 EEEEE--GGGTT-B-HHHHHHHHHHHHHHCC-TT-SEEEEEESSSSECE--B--HHHHHHHHCS.......................-THH...HHHHH CS
       ECH_2   2 gvitLnrpkalNaLslemvralkealkewekddevklvvlkgagekafCAGgDvralyeaakeg.......................kkee...eeffr 74 
                 +++++nrp++lN+ + +m  +l+ ++++ +  ++v+++vl+gag++afC G D++a  +    g                       +  +   ++ + 
  KHJ34224.1  48 THVEINRPEKLNSFHKAMWMELETIFDALSLASNVRVIVLSGAGDRAFCTGIDIKAALQGGILGkqktpasttssqedsrrkidaarQ--AvsiRRHVV 144
                 5789****************************************************99987666567899999998887776654321..234677888 PP

                 HHHHHHHHHHC-SS-EEEEE-BEEETHHHHHHTTSSEEEE-TT-EEE--GGGGT----TTHHHHHHCSSTTHHHH..HHHH---B-HHHHHHTTS--EE CS
       ECH_2  75 eeYklnyliatypkpvvalmdGivmGgGvGlsvhgsfrvvtertvfAmPEtaIGlfPDvGgsyfLsrlpgelGly..lalTGarlkgadalaaglathy 171
                 e  k+ + i++++kpv+++++G++ G G+ +s+ + +r  +e+++fA+ E+ IGl  D+G+   L++l g++     + l+++ + +++al +g+ +++
  KHJ34224.1 145 EFQKCVSSIERCEKPVICVLHGFTFGLGIDISACADIRLCSEDAKFAVKEVDIGLAADIGTLSRLPKLVGSFSWVkdVSLSARFFLANEALRVGFVSQI 243
                 888999******************************************************988888877755432337899999999999999999888 PP

                 --GGGHHHHHH CS
       ECH_2 172 vpseklealee 182
                 ++++ +eal e
  KHJ34224.1 244 LQNK-VEALSE 253
                 7654.566665 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 1.2e-06
                 HHHHHHHHHHS-HHHHHHHHHHHHHHTTT--HHHHHHHHHHHHHHHHHHSSHHHHHHHHTTS-------S CS
       ECH_2 249 akktletlkkrsPtslkvtleqlrrgrklsslaevlrmElrlalrllaekDfveGvrallvdkdkkPkWk 318
                 a ++ + l+++sP++++ t e+l+++r+ s +a+ l+      +++++++D++e      +dk+++Pk++
  KHJ34224.1 254 AFRMGQLLASKSPIAIQGTKELLNHARDHS-IADSLQYTGVWNSAAIQTDDVYESLM--SIDKKRSPKFE 320
                 5567789**********************5.***********************875..59*******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2326.87
//
Query:       KHJ34225.1  [L=491]
Description: putative miz zinc finger domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 4019.17
//
Query:       KHJ34226.1  [L=847]
Description: putative hmg-i hmg- dna-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    0.00017   21.8  13.9      0.066   13.7   0.3    4.7  3  zf-C2H2      Zinc finger, C2H2 type
     0.0018   19.0  16.3       0.18   12.7   0.2    5.8  4  zf-C2H2_4    C2H2-type zinc finger
  ------ inclusion threshold ------
      0.023   14.7   1.1      0.064   13.2   1.1    1.8  1  Sina         Seven in absentia protein family
      0.056   14.2   0.4        0.2   12.3   0.4    2.1  1  zf-TRAF      TRAF-type zinc finger
       0.15   12.4   1.3         23    5.4   0.0    3.4  2  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.3   1.8e-05     0.066       2      23 .]     603     626 ..     602     626 .. 0.92
   2 !    6.8   0.2    0.0028        10       1      23 []     630     657 ..     630     657 .. 0.89
   3 !    5.9   3.2    0.0057        20       1      23 []     663     694 ..     663     694 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.8e-05
                 EETTTT.EEESSHHHHHHHHHC.C CS
     zf-C2H2   2 kCpdCg.ksFkrksnLkrHirt.H 23 
                 +C+ C+  +Fk++s+L++Hi   H
  KHJ34226.1 603 RCNLCSrAPFKDSSSLRKHIAAaH 626
                 7*****9*************8777 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0028
                 EEET....TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp....dCgksFkrksnLkrHirt.H 23 
                 ++C     +C+ +F +k + krHi + H
  KHJ34226.1 630 FPCAfsfaGCTSTFGSKNEWKRHIASqH 657
                 667777779***************9988 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0057
                 EEETTTT........EEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCpdCg........ksFkrksnLkrHirt.H 23 
                 y+C+ C+          F+rk+++++H+r+ H
  KHJ34226.1 663 YRCSSCPqssvegkgNEFNRKDLFTQHLRRmH 694
                 78888888888888889*************99 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.41   1.5e+03       6      20 ..     113     128 ..     111     130 .. 0.89
   2 !   12.7   0.2     5e-05      0.18       2      24 .]     603     626 ..     602     626 .. 0.94
   3 !    9.3   0.3   0.00062       2.2       5      24 .]     634     657 ..     630     657 .. 0.83
   4 ?    0.6   3.1      0.41   1.5e+03       8      24 .]     678     694 ..     663     694 .. 0.60

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.41
   zf-C2H2_4   6 CgksFsskka.LlrHl 20 
                 C+ +F + +a L+rHl
  KHJ34226.1 113 CSDPFINLTAeLSRHL 128
                 99****99999****7 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 5e-05
   zf-C2H2_4   2 kCpiC.gksFsskkaLlrHlkthH 24 
                 +C +C +++F+++++L++H+++ H
  KHJ34226.1 603 RCNLCsRAPFKDSSSLRKHIAAAH 626
                 7*******************9887 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.00062
   zf-C2H2_4   5 i....CgksFsskkaLlrHlkthH 24 
                 +    C+ +F sk++++rH++++H
  KHJ34226.1 634 FsfagCTSTFGSKNEWKRHIASQH 657
                 55555****************999 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.41
   zf-C2H2_4   8 ksFsskkaLlrHlkthH 24 
                   F++k+ + +Hl+++H
  KHJ34226.1 678 NEFNRKDLFTQHLRRMH 694
                 45655555788999988 PP

>> Sina  Seven in absentia protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   1.1   1.8e-05     0.064      32      76 ..     617     662 ..     596     701 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.8e-05
        Sina  32 ekakHeeeckfrpysCpcpgakCkwq.GdldellkHlrneHkkvet 76 
                 + +kH    + rp+ C ++ a C+ + G+++e++ H+ ++H  ++ 
  KHJ34226.1 617 SLRKHIAAAHTRPFPCAFSFAGCTSTfGSKNEWKRHIASQHLCLTY 662
                 5789*******************8544**************66555 PP

>> zf-TRAF  TRAF-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   5.7e-05       0.2      11      55 ..     603     646 ..     594     652 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 5.7e-05
                 E-TT--S-BEEE.TTTCCCCCCTTSTTS--XXSSXXXXSXXXXXHH CS
     zf-TRAF  11 pCpnecckkkil.RkdlkdHlekdCkkaevkCkfkevGCkekvkre 55 
                  C n c++       +l++H++ + ++++ +C f+  GC +++  +
  KHJ34226.1 603 RC-NLCSRAPFKdSSSLRKHIA-AAHTRPFPCAFSFAGCTSTFGSK 646
                 56.55555433313579*****.99***************998544 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0    0.0063        23       4      21 ..     604     622 ..     603     623 .. 0.93
   2 ?    4.0   0.3     0.018        64      10      23 ..     642     655 ..     639     657 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0063
                  BTTTT.BBBSSHHHHHCCT CS
  zf-C2H2_jaz   4 CvlCd.KyFksenaldnHl 21 
                  C lC+   Fk++++l++H+
   KHJ34226.1 604 CNLCSrAPFKDSSSLRKHI 622
                  999**99***********8 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.018
                  BBSSHHHHHCCTTS CS
  zf-C2H2_jaz  10 yFksenaldnHlkS 23 
                  +F s n ++ H+ S
   KHJ34226.1 642 TFGSKNEWKRHIAS 655
                  799*********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (847 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       797  (0.0444531); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.41
# Mc/sec: 6271.57
//
Query:       KHJ34227.1  [L=966]
Description: putative sam domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-13   50.4   0.0    2.8e-13   49.5   0.0    1.5  1  SH3_9     Variant SH3 domain
    2.1e-11   43.2   0.1    5.9e-11   41.8   0.0    1.8  2  SH3_1     SH3 domain
    1.2e-09   38.1   0.0    2.7e-09   37.0   0.0    1.6  1  SAM_2     SAM domain (Sterile alpha motif)
    7.5e-09   36.1   0.0    6.6e-08   33.0   0.0    2.6  1  PH        PH domain
    6.8e-05   22.5   0.0    0.00018   21.1   0.0    1.7  1  SH3_2     Variant SH3 domain
  ------ inclusion threshold ------
      0.018   15.5   0.0      0.018   15.5   0.0    3.1  3  PH_11     Pleckstrin homology domain
      0.038   14.3   0.0       0.18   12.1   0.0    2.2  2  PH_8      Pleckstrin homology domain


Domain annotation for each model (and alignments):
>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.5   0.0   1.1e-16   2.8e-13       1      48 [.      20      72 ..      20      73 .. 0.90

  Alignments for each domain:
  == domain 1  score: 49.5 bits;  conditional E-value: 1.1e-16
       SH3_9  1 AlypyepreddeLsLqrGDvitvieese...dgWlegs.l.tGrtGlvPanyv 48
                +++++ +r+ deLsL++GD++ +ie+++   dgW++g+ l +G++Gl+P+ y+
  KHJ34227.1 20 VVHDFSARSSDELSLSKGDRVELIERDDdfgDGWFLGRhLlNGKSGLFPEVYT 72
                79**********************7755588******9846***********7 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   0.0   2.3e-14   5.9e-11       4      47 ..      22      68 ..      20      69 .. 0.97
   2 ?   -3.4   0.0         3   7.8e+03      24      37 ..     736     749 ..     736     751 .. 0.77

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 2.3e-14
                SSBEXSSTTBXEBSTTEEEEEEEECSS...SEEEEEETTSTEEEEEE CS
       SH3_1  4 YDYeaeesdELsfkkGDviivleksed...gWwkgrlkgtgkeGliP 47
                +D+ a++sdELs+ kGD ++++e+++d   gW+ gr   +gk Gl+P
  KHJ34227.1 22 HDFSARSSDELSLSKGDRVELIERDDDfgdGWFLGRHLLNGKSGLFP 68
                8********************************************** PP

  == domain 2  score: -3.4 bits;  conditional E-value: 3
                 EEEECSSSEEEEEE CS
       SH3_1  24 vleksedgWwkgrl 37 
                 +l+ + +gW+k ++
  KHJ34227.1 736 ILNADYSGWMKKKS 749
                 6888999**98665 PP

>> SAM_2  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   0.0   1.1e-12   2.7e-09       1      65 [.     239     305 ..     239     306 .. 0.95

  Alignments for each domain:
  == domain 1  score: 37.0 bits;  conditional E-value: 1.1e-12
                 GGGHHHHHHHHHHHHTTT.GGGHHHHHHTTCSHHHHHTTSCHHHH..HHTTHHHHHHHHHHHHHHHHH CS
       SAM_2   1 veswsledvaeWLrsigl.kqytdnFrdagitgaelllrlteedL..krlGitsvghrkkilkkiqel 65 
                 v sw++e+v+e L + g  +++++++rd++itg ++ll +++ ++  k+++  svg+r+k+++ i+++
  KHJ34227.1 239 VASWTSEEVSEHLFTRGVePKHCEILRDQEITG-DVLLDMDQATIflKEFDFGSVGRRLKTWQRIKSI 305
                 569******************************.*********99978*****************987 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   2.6e-11   6.6e-08       3     103 ..     741     884 ..     739     885 .. 0.82

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 2.6e-11
                 EEEEEEEETSSSSCSEEEEEEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEEC....................................TTSSS CS
          PH   3 keGwLlkkgsgkkkswkkrwfvLkdsellyykndksekdkepkgsislsncevvevva....................................tedpk 65 
                 ++Gw++kk+ +   swk r f+Lk+ +l+yy ++    d e +g i++s ++v   ++                                    ++d++
  KHJ34227.1 741 YSGWMKKKSTNLMASWKPRLFILKGRRLSYYYSE---DDDEERGLIDISFHRVLPADNdrltglhatltgatntkshgldnsisafqsateaepKPDKG 836
                 89*********999*************9998888...8***************9988899999999999999988888888888888888888644666 PP

                 STSEEEE............EESTSSSTEEEEEEESSHHHHHHHHHHHHHH CS
          PH  66 rkfcfel............riverngsrtyllqasseeerkeWikaiqsa 103
                 ++ +f +            ++   ++++ +++++++    + W++a+ +a
  KHJ34227.1 837 NDSVFIFklvppkaglqraVTF--TKPTIHYFAVPNVKQGRLWMAALMKA 884
                 6666666556666666654222..3359*****************99876 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   7.2e-08   0.00018       4      51 ..      20      69 ..      18      74 .. 0.92

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 7.2e-08
                ESS-B-SCGCCB--B-TTEEEEEE..EEEECT...TEEEEEE..CCCEEEEEG CS
       SH3_2  4 aiedyvgedkseLsfkkGdvikvlslgskdsd...gwwegev..gGrvGlfPs 51
                ++ d+ + + +eLs+ kGd + ++   ++d+d   gw +g+   +G+ GlfP 
  KHJ34227.1 20 VVHDFSARSSDELSLSKGDRVELI---ERDDDfgdGWFLGRHllNGKSGLFPE 69
                67799999****************...99999**99999*8889********6 PP

>> PH_11  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.5       1.3   3.4e+03      56     103 ..     328     374 ..     313     376 .. 0.71
   2 ?   -2.0   0.1       1.9     5e+03      17      60 ..     449     488 ..     437     546 .. 0.66
   3 ?   15.5   0.0   6.8e-06     0.018       2      36 ..     742     778 ..     741     825 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.3
       PH_11  56 isaalfkidsirssksddllleistetkifflkgdsneeteeWvealk 103
                  ++++ k +s++ss+    + +    +ki  l+ +  ++   W  +++
  KHJ34227.1 328 EEISRNKTRSANSSHTLPRMSSTHERQKI-SLNSRLSNQNSLWTDSVQ 374
                 45566677777777777777788888888.488888888888887776 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.9
       PH_11  17 wfavlkdgvLeyYksekkkvvkhviklSngseaklkadlisaal 60 
                 w   +++++ +y  ++   +  hv+++ ++s +    dl + ++
  KHJ34227.1 449 WT--MQNSNSSYSGQPSSSI--HVKVAKKSSACSSTDDLFNVEN 488
                 44..5555556666666666..6666666666666555555544 PP

  == domain 3  score: 15.5 bits;  conditional E-value: 6.8e-06
       PH_11   2 kGylkkkgsk...aWkrrwfavlkdgvLeyYksekkkv 36 
                  G++kkk+     +Wk r f +lk ++L+yY se +  
  KHJ34227.1 742 SGWMKKKSTNlmaSWKPRLF-ILKGRRLSYYYSEDDDE 778
                 58999999999*9*******.***********998765 PP

>> PH_8  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   7.2e-05      0.18       1      49 [.     743     790 ..     743     801 .. 0.88
   2 ?   -2.7   0.0       2.9   7.3e+03      26      83 ..     861     879 ..     856     890 .. 0.55

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 7.2e-05
        PH_8   1 gillkkrrkklqgyakRfFvLdlksstlsYyrddnssalrgkiplsla.i 49 
                 g++ kk    +  ++ R F+L  k   lsYy+++++ + rg i +s   +
  KHJ34227.1 743 GWMKKKSTNLMASWKPRLFIL--KGRRLSYYYSEDDDEERGLIDISFHrV 790
                 899******************..99*****************99997634 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.9
        PH_8  26 stlsYyrddnssalrgkiplslaiisaneekreiiidsGaevWeLkasnekdfqeWve 83 
                  t++Y++  n                                        k+ + W+ 
  KHJ34227.1 861 PTIHYFAVPNV---------------------------------------KQGRLWMA 879
                 56666655543.......................................33334444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (966 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       734  (0.0409393); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.66u 0.24s 00:00:00.90 Elapsed: 00:00:00.40
# Mc/sec: 7275.22
//
Query:       KHJ34228.1  [L=442]
Description: putative miz zinc finger domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.3e-12   44.7   2.1    1.2e-11   44.2   0.6    2.1  2  zf-MIZ    MIZ/SP-RING zinc finger
    2.3e-05   24.8   0.1    4.1e-05   24.0   0.1    1.5  1  PINIT     PINIT domain
    0.00082   19.1   1.2     0.0031   17.3   1.2    2.0  1  zf-Nse    Zinc-finger of the MIZ type in Nse subunit


Domain annotation for each model (and alignments):
>> zf-MIZ  MIZ/SP-RING zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.63   3.8e+03      12      23 ..     130     141 ..     126     145 .. 0.76
   2 !   44.2   0.6     2e-15   1.2e-11       3      48 ..     301     356 ..     299     358 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.63
                 -SSEEEETT--S CS
      zf-MIZ  12 ikiPvrgekCkH 23 
                 ikiP  ++ C+ 
  KHJ34228.1 130 IKIPLDSISCNG 141
                 899999999975 PP

  == domain 2  score: 44.2 bits;  conditional E-value: 2e-15
                 SB-TTTSSB-SSEEEETT--SS--EEHHHHHHHHHHS--..........-B-TTT- CS
      zf-MIZ   3 lkCplslsrikiPvrgekCkHlqCfdlesylelnertet..........WnCPvCs 48 
                 l  p++++  +iPvrg++C H  Cfdle+yl++   +++          W+CP+C 
  KHJ34228.1 301 LADPFTTRTFEIPVRGKYCLHRECFDLETYLNTRISKPNrknqpcmvdvWKCPLCG 356
                 55699***************************99988888899************6 PP

>> PINIT  PINIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.1   6.8e-09   4.1e-05      32     145 ..     118     248 ..      91     249 .. 0.76

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 6.8e-09
       PINIT  32 vsfsfklseeqveklakssrk...........ekrvqyqlrlf..cased.....sksesseeqdiefPpqleikvNgkevkanlrglknkpGtarPvd 112
                  +f+f++se ++ k+  +s +           + + qy+lr +  +  ++        ++    d   P ++++ +N++ ++  ++   +k     P+d
  KHJ34228.1 118 LNFEFSVSEAEIIKIPLDSIScngsicsrefqQGTLQYRLRCVeiS--SSetsilG--NEWMVKDTTWPENICLDINSRHLEIRRKIHHGKD---LPID 209
                 5788888888888887766668888888887788899999999642..33345432..234578899**************99888877777...**** PP

       PINIT 113 itkllrlspa.etNrieity..altkk.....kYylvvylV 145
                 it+++ ++    +Nr++++   +  ++     +Y+l+v ++
  KHJ34228.1 210 ITQHVLKNGIdSPNRVTVSIiqD--RNkvevhNYFLAVEVI 248
                 *****999999********9641..3335666899888765 PP

>> zf-Nse  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   1.2   5.1e-07    0.0031       2      53 ..     291     354 ..     290     357 .. 0.70

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 5.1e-07
                 XXXXXSSBXXSB-TTTSSB-SSEEEESSS--..EEEHHHHHHHC.............TTTS-EE-SC CS
      zf-Nse   2 elaieeerislkCPltlqpfeePvtskkCpH..vFEreaIleli.............krkktvkCPv 53 
                 e++i++  i+l +P t ++fe Pv+ k C H   F+ e+   ++               ++  kCP+
  KHJ34228.1 291 EMVISHISINLADPFTTRTFEIPVRGKYCLHreCFDLET---YLntriskpnrknqpCMVDVWKCPL 354
                 7899999************************33355443...3333356666644444445556666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.44
# Mc/sec: 3044.61
//
Query:       KHJ34229.1  [L=404]
Description: hypothetical protein EV44_g3681 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-26   92.2   0.0    4.2e-26   91.6   0.0    1.3  1  DDE_1      DDE superfamily endonuclease
    4.7e-06   26.4   0.0    1.2e-05   25.1   0.0    1.6  1  DDE_3      DDE superfamily endonuclease
  ------ inclusion threshold ------
       0.15   11.8   1.5       0.42   10.4   1.5    1.8  1  zf-CCHC_4  Zinc knuckle
       0.16   12.1   3.3       0.33   11.1   3.3    1.6  1  zf-CCHC    Zinc knuckle


Domain annotation for each model (and alignments):
>> DDE_1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.6   0.0   9.5e-30   4.2e-26       2     175 .]      21     189 ..      20     189 .. 0.92

  Alignments for each domain:
  == domain 1  score: 91.6 bits;  conditional E-value: 9.5e-30
       DDE_1   2 erltvllcanaagsekLkplvigkaksprafkngektkkkldveyksnrkawltssifeeWLkvfdkrle..aekrkilLlldssrshetvel.lesel 97 
                 er+t+++c n  g    +p ++ +++++  +++ +  + + d+++k ++++w+++++  eWLk+fdk ++   ++++ +L+ld+++sh+ + +   ++ 
  KHJ34229.1  21 ERATTIVCVNGEGA-STPPFLVVQGTYLLFSWY-TESELPDDWDIKTTSNGWTDNETDLEWLKHFDKHTVarTKGSYRMLVLDGHGSHRSAAFqDYCKN 117
                 79999999777665.6799**************.9999999***************************9988999**************9998799*** PP

       DDE_1  98 qniklvflPassasllqPldqgvvselKarYrrqllqalleeqnrlskeqkkltlldalkfikkAwn.avsketiksaf 175
                 +ni  ++lPa+s++l qPld+g++s lK+ Y r++   + +  n++ k       +++l    +A+   +++++i+++f
  KHJ34229.1 118 HNIVNLCLPAHSSHLTQPLDVGCFSVLKRLYSREIDVFIKAHINHITK-------VEFLIAFHAAYLaTITEKNIEAGF 189
                 **********************************99999999999988.......888888888988899999999987 PP

>> DDE_3  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   2.6e-09   1.2e-05      70     121 ..      85     134 ..      66     153 .. 0.77

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 2.6e-09
       DDE_3  70 rlletalqakkivlilDnasiHkseslrelveeeadrlellylPpySPelNp 121
                 +    +++    +l+lD+++ H+s++++++ ++  ++++ l lP++S++l +
  KHJ34229.1  85 KHTVARTKGSYRMLVLDGHGSHRSAAFQDYCKN--HNIVNLCLPAHSSHLTQ 134
                 333334444489*********************..**************965 PP

>> zf-CCHC_4  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.5   9.5e-05      0.42      30      48 ..     346     364 ..     345     365 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 9.5e-05
   zf-CCHC_4  30 LrsfCyiCgvlGHsdkrCd 48 
                 +++ C++Cg  GH+++ C+
  KHJ34229.1 346 IGRRCSTCGNTGHNARTCQ 364
                 5788**************7 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.3   7.4e-05      0.33       2      17 ..     349     364 ..     348     365 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.4e-05
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                  C +CG++GH ar C 
  KHJ34229.1 349 RCSTCGNTGHNARTCQ 364
                 7************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (404 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       844  (0.0470746); expected 358.6 (0.02)
Passed bias filter:                      635  (0.0354175); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.22s 00:00:00.74 Elapsed: 00:00:00.39
# Mc/sec: 3125.31
//
Query:       KHJ34230.1  [L=167]
Description: hypothetical protein EV44_g3481 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
        2.7    7.0   4.0        2.8    7.0   4.0    1.1  1  LMF1        Lipase maturation factor


Domain annotation for each model (and alignments):
>> LMF1  Lipase maturation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.0   0.00015       2.8     186     270 ..      44     115 ..       7     162 .. 0.51

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00015
        LMF1 186 allvllvvslfslkiseeekkvesklaftkeefaklltkvlvelllllllalllvvvkalvktakkliqsvlllvllllavlvft 270
                 a++v  vv ++ +++  +  +v  ++a + + f ++   v+v++ +++++a+++vvv             v+++v++++a++v  
  KHJ34230.1  44 AEVVAEVVVVDVAEVVADAVAVADAIADADAVFVAVAVVVAVAVAVVVVVAVAVVVV-------------VAVAVVVAFAAVVSG 115
                 333333444444444433444444444444444444444444444444444443333.............333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2511  (0.140052); expected 358.6 (0.02)
Passed bias filter:                      560  (0.0312343); expected 358.6 (0.02)
Passed Vit filter:                        92  (0.00513135); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 1213.85
//
Query:       KHJ34231.1  [L=537]
Description: hypothetical protein EV44_g2998 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      0.004   17.3   0.4      0.016   15.4   0.4    2.0  1  Yippee-Mis18    Yippee zinc-binding/DNA-binding /Mis18, centr
     0.0083   16.7   3.3      0.085   13.5   0.6    3.0  3  SlyX            SlyX
  ------ inclusion threshold ------
      0.011   16.0   1.6       0.16   12.2   0.2    2.7  2  ABC_tran_CTD    ABC transporter C-terminal domain
      0.023   15.1   2.0        1.4    9.4   0.5    2.8  2  LPP             Lipoprotein leucine-zipper
      0.056   13.5   3.8        2.6    8.1   0.3    2.6  2  DUF1664         Protein of unknown function (DUF1664)
       0.34   10.2   3.4       0.44    9.8   2.7    1.6  1  CmlA_N          Diiron non-heme beta-hydroxylase N-terminal d
       0.55   10.6   8.0        6.5    7.1   0.3    3.2  4  BLOC1_2         Biogenesis of lysosome-related organelles com
        1.9    9.1  14.4       0.27   11.9   0.9    3.7  3  HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interac


Domain annotation for each model (and alignments):
>> Yippee-Mis18  Yippee zinc-binding/DNA-binding /Mis18, centromere assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.4   7.2e-06     0.016       4      98 ..       7     107 ..       3     112 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 7.2e-06
                   EETTTS-EEEECCCEEE..EECC....CEEEES---CCCEEEECEEEETTSTTEEEEEEEETTT--EEEEEEEECSCCCCCCCTCEEEEGGGEEEEE CS
  Yippee-Mis18   4 qCkkCktilgdslqlvs..egra....lnivvlkkvtrnvvvgkelvtdeegkctystlsCkgCnsvlGwkYksteeelkykrglfiletkaitsys 94 
                    C kCk+++g   + ++   +++     n+v     + +  + +    ++ +++    + C++C  vlG    s++ +   k+++ il  k+ t++s
    KHJ34231.1   7 YCLKCKSEIGRFRNAWNgiGNTYfspiYNLVSGAGLETTGDIYEAANGSSIQNSLLRDVVCAKCRVVLGLRCDSAPDNHILKQNQLILRLKETTIIS 103
                   59999999999888888652222455556666666665555555555554467****************************************9999 PP

                   SSSS CS
  Yippee-Mis18  95 lgek 98 
                    g+ 
    KHJ34231.1 104 EGSG 107
                   8776 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.6   3.8e-05     0.085       9      49 ..     201     241 ..     200     259 .. 0.86
   2 ?   -1.0   0.0       1.3   2.8e+03      27      47 ..     273     293 ..     243     303 .. 0.54
   3 ?    2.2   0.1      0.13   2.9e+02      26      55 ..     296     325 ..     282     333 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.8e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XX CS
        SlyX   9 EiklafqedtieeLndvvaeqqqqidrlqrqlrllaerlke 49 
                 E+ +  q++ i++L+ ++ + +++++ l+  +++l++++++
  KHJ34231.1 201 EETILSQQKDIDRLSGTMLRIERDMQTLKSYMQELNNKFAS 241
                 788889*******************************9955 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHHHHHHHHHT- CS
        SlyX  27 aeqqqqidrlqrqlrllaerl 47 
                  e ++  + l r ++ +a  +
  KHJ34231.1 273 PEWNKAASLLARNMKTIAGDV 293
                 333334444555555555555 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.13
                 HHHHHHHHHHHHHHHHHHHHT-XXXXXXXX CS
        SlyX  26 vaeqqqqidrlqrqlrllaerlkeleessg 55 
                 +  q+++i+  ++ l+ la rl+ le +++
  KHJ34231.1 296 LSSQAEKISGFKKTLEDLASRLEYLEIQDQ 325
                 567999999999999999999988887765 PP

>> ABC_tran_CTD  ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.2   7.2e-05      0.16      12      62 ..     220     271 ..     205     275 .. 0.83
   2 ?    1.9   0.1      0.12   2.8e+02      39      68 ..     292     321 ..     281     328 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 7.2e-05
  ABC_tran_CTD  12 eleaeIeaLEeeiaeleaeladpelysdp.eklaelsaeleeleaeLeelye 62 
                   ++e++++ L   ++el++++a+    +++ +++ae+ +e+++++  L++++e
    KHJ34231.1 220 RIERDMQTLKSYMQELNNKFASDYHSKNQcKEVAEVRNEIKRVNVRLDQKEE 271
                   599******************7765577799*******************98 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.12
  ABC_tran_CTD  39 dpeklaelsaeleeleaeLeelyerWeeLe 68 
                   d +kl+   +++   ++ Le l +r e+Le
    KHJ34231.1 292 DVKKLSSQAEKISGFKKTLEDLASRLEYLE 321
                   556777777777777777777777777776 PP

>> LPP  Lipoprotein leucine-zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.5    0.0006       1.4       5      45 ..     221     267 ..     217     270 .. 0.85
   2 ?    3.9   0.0     0.032        72       2      21 ..     286     305 ..     285     316 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0006
         LPP   5 LssqVsqLkskvdqlssd......vnsakaaaqaakeEAaRANqRlD 45 
                 +  + ++Lks +++l+++       ++  ++++++++E +R N RlD
  KHJ34231.1 221 IERDMQTLKSYMQELNNKfasdyhSKNQCKEVAEVRNEIKRVNVRLD 267
                 678999999999999999888887666667899*************9 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.032
         LPP   2 ldeLssqVsqLkskvdqlss 21 
                 ++ ++ +V++L+s+ +++s 
  KHJ34231.1 286 MKTIAGDVKKLSSQAEKISG 305
                 889999********999985 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.3    0.0012       2.6      56     118 ..     173     240 ..     164     248 .. 0.77
   2 ?    5.9   0.3    0.0055        12      63     114 ..     254     304 ..     244     324 .. 0.57

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0012
     DUF1664  56 slaatkrh.Lssridrvdkkldeqk....eiskeikeevtevredlseigedvesvkeavegleskle 118
                 ++a+ k+h ++ +i+++   +++      e++ + +++++++++ + +i++d++++k+ +++l++k +
  KHJ34231.1 173 EIAQPKQHdFETEINSLTIGVEKFRgwaeETILSQQKDIDRLSGTMLRIERDMQTLKSYMQELNNKFA 240
                 5555555448888888888888865111145555699***************************9975 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0055
     DUF1664  63 hLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegle 114
                 +  ++i+rv+ +ld+ +e+ +  ++  + + +++++i  dv+++++  e++ 
  KHJ34231.1 254 EVRNEIKRVNVRLDQKEEVPE-WNKAASLLARNMKTIAGDVKKLSSQAEKIS 304
                 556678888888877766643.444455555555555555555554433332 PP

>> CmlA_N  Diiron non-heme beta-hydroxylase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   2.7   0.00019      0.44     139     223 ..     308     392 ..     243     404 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00019
      CmlA_N 139 rliEsllykskyykeelQsvalslleederpfvlstPrLpdeeslelklpFadkalDeLfrareepqsleeiaealgiakaqeek 223
                 + +E l  + +y + + Qs+  + + + +r+    t  L++++ l  +  ++ +  D+ +r++ + q   ei+++  ++++++++
  KHJ34231.1 308 KTLEDLASRLEYLEIQDQSIDYEKIPSLNRDISSETLSLKRNHDLVERNAWDRRKTDDQARMKFKKQRSDEIRQKEDLKSNSQKQ 392
                 579*********************************************************************9876555444332 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.5    0.0054        12      32      95 ..     175     239 ..     163     240 .. 0.84
   2 ?    5.8   0.3    0.0075        17      34      93 ..     250     312 ..     244     315 .. 0.59
   3 ?    7.1   0.3    0.0029       6.5      39      79 ..     282     322 ..     263     329 .. 0.64
   4 ?   -0.7   0.1      0.79   1.8e+03      17      60 ..     324     367 ..     315     382 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0054
     BLOC1_2  32 asekykklkdvaaslekkleklnekye.elqpylqqidqiekqvteLeeavseLDeyskeLEakf 95 
                 a+ k ++ +++++sl+  +ek +   e ++ ++ + id++  +  ++e   + L +y++eL +kf
  KHJ34231.1 175 AQPKQHDFETEINSLTIGVEKFRGWAEeTILSQQKDIDRLSGTMLRIERDMQTLKSYMQELNNKF 239
                 566667778888888888888888766589999******************************99 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0075
     BLOC1_2  34 ekykklkdvaaslekkleklnekye...elqpylqqidqiekqvteLeeavseLDeyskeLEa 93 
                 +++++++++++ +++ l++ +e  e   + + + ++++ i  +v++L + ++++  + k LE+
  KHJ34231.1 250 KEVAEVRNEIKRVNVRLDQKEEVPEwnkAASLLARNMKTIAGDVKKLSSQAEKISGFKKTLED 312
                 566666666666666666666543332144445566777777777777777777777777764 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0029
     BLOC1_2  39 lkdvaaslekkleklnekyeelqpylqqidqiekqvteLee 79 
                 l+++++ ++ +++kl+++ e+++ +++ ++++  +++ Le 
  KHJ34231.1 282 LARNMKTIAGDVKKLSSQAEKISGFKKTLEDLASRLEYLEI 322
                 34455555556666666666677777777777777766665 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.79
     BLOC1_2  17 atvedyklLeklNeaasekykklkdvaaslekkleklnekyeel 60 
                   + dy+ +  lN+  s++  +lk++ + +e+++ + ++++++ 
  KHJ34231.1 324 DQSIDYEKIPSLNRDISSETLSLKRNHDLVERNAWDRRKTDDQA 367
                 55679999999999999999999999998888887777766654 PP

>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.9   0.00012      0.27      13      79 ..     170     236 ..     166     258 .. 0.85
   2 ?    0.2   0.4       0.5   1.1e+03      32      69 ..     282     318 ..     257     331 .. 0.61
   3 ?    2.6   1.5     0.092   2.1e+02       5      55 ..     346     395 ..     343     409 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00012
  HIP1_clath_bdg  13 kqlsvarqaqeeverekkeleeelerlkeeaerkleeqkeelekLkreleakraelarlkssLesse 79 
                     ++   a+ +q++ e+e + l+  +e+++  ae+ +  q++ +++L   + + + ++++lks +++ +
      KHJ34231.1 170 RLQEIAQPKQHDFETEINSLTIGVEKFRGWAEETILSQQKDIDRLSGTMLRIERDMQTLKSYMQELN 236
                     5667899****************************************99999999999999887543 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.5
  HIP1_clath_bdg  32 leeelerlkeeaerkleeqkeelekLkreleakraela 69 
                     l+++++ +  +  +kl+ q+e++  +k+ le+   +l+
      KHJ34231.1 282 LARNMKTIAGD-VKKLSSQAEKISGFKKTLEDLASRLE 318
                     44444444433.35666777777777776666555544 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.092
  HIP1_clath_bdg   5 LrKnAevtkqlsvarqaqeeverekkeleeelerlkeeaerkleeqkeele 55 
                     L++n +++      r + ++ +r k + ++  ++++++++ k + qk++l+
      KHJ34231.1 346 LKRNHDLVERNAWDRRKTDDQARMKFKKQR-SDEIRQKEDLKSNSQKQNLD 395
                     788888888888888888888888876544.47788888888888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (537 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1708  (0.0952647); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.69u 0.27s 00:00:00.96 Elapsed: 00:00:00.46
# Mc/sec: 3542.78
//
Query:       KHJ34232.1  [L=267]
Description: putative tlc domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.4e-45  153.8  16.8    5.5e-45  153.5  16.8    1.1  1  TRAM_LAG1_CLN8  TLC domain


Domain annotation for each model (and alignments):
>> TRAM_LAG1_CLN8  TLC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.5  16.8   3.1e-49   5.5e-45      25     197 ..       3     213 ..       1     214 [. 0.95

  Alignments for each domain:
  == domain 1  score: 153.5 bits;  conditional E-value: 3.1e-49
  TRAM_LAG1_CLN8  25 sspelwegy.perilgathfllkayyllalgYfiydllvlllyekkrkdfvemliHhiitlvllvlsyvrnlgrvglvvlllhelsdpflnlrki 118
                      + e+++++ ++r++g+t+++ + +++la+gYf++d+l++l++ + ++  +++l+H++++l+++++++ r++++++ ++++l+els+pfln++++
      KHJ34232.1   3 MDQERKNMNwNDRVWGYTGAAGM-IQALATGYFLWDFLISLIHVRIFG--PGLLAHAVSALLVFSFGF-RPFVNFYGCTFILYELSSPFLNFHWF 93 
                     4445666666*************.***********************9..******************.************************** PP

  TRAM_LAG1_CLN8 119 lsylkkkskssklvlfngllfllsFfvcRlvllpylillsildvaklslstap.......................................... 171
                     +++l ++ ++sk +l+ng+++l++Ff+cRl++++y+++++++d++++  ++ +                                          
      KHJ34232.1  94 FDKL-GM-TGSKAQLYNGIILLFTFFCCRLLWGTYQSIRVYQDIWAALHYQPQmnninsnifsndivdtlemapkqtsnsihqihlmgysysqyt 186
                     ****.**.9************************************97666555****************************************** PP

  TRAM_LAG1_CLN8 172 .lwlpliflilllvLqllnlyWfyliv 197
                      +wl li+l+++lvL++ln+yWf+l++
      KHJ34232.1 187 pVWLSLIYLGSNLVLNFLNFYWFRLMI 213
                     **************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1910.55
//
Query:       KHJ34233.1  [L=454]
Description: putative dor1-like family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-50  172.2  14.9    5.8e-39  133.7  11.0    2.1  2  Dor1      Dor1-like family
  ------ inclusion threshold ------
      0.033   14.1   0.7      0.073   12.9   0.0    1.9  2  DUF829    Eukaryotic protein of unknown function (DUF829)
          1    9.5   7.6       0.15   12.1   2.5    2.4  2  Vps51     Vps51/Vps67


Domain annotation for each model (and alignments):
>> Dor1  Dor1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.7  11.0   9.7e-43   5.8e-39       2     214 ..      43     276 ..      42     282 .. 0.95
   2 !   40.1   0.1   2.8e-14   1.7e-10     217     317 ..     304     417 ..     300     423 .. 0.85

  Alignments for each domain:
  == domain 1  score: 133.7 bits;  conditional E-value: 9.7e-43
        Dor1   2 selsskpleelek.epelLaeeaeeilaqiqdLarknyktlidaaealeairqelediraqledLvlklpkLteectrfskkaeeisek.....rkenk 94 
                 + l+s  l +l + ep++L + ++ +  ++q+L++ +++ +i + ++l+++ +el+ i ++ ++L+++lp L++++ rfs++++  se+     r+ + 
  KHJ34233.1  43 NHLTSLSLSSLVSeEPQSLSQSKQSLYLSLQALSKRSHNSIISSSTHLSNLGTELSVITESAASLRDSLPLLDKAAIRFSENYNTRSENealdrRRTAL 141
                 57899999999999*******************************************************************************9***** PP

        Dor1  95 llldkheqllellelPqlmd........rcirngyydealeLeayvsrLkqristnpviqsiaaeveetvqelleqLiqkLrsp.lqLaeclrvigYlr 184
                 ll++++ +++ +lelP l++        ++i++ +y +al+L+a+v+rL+++++++++iqsi ++ +e++++++++Li +L++  l+La  +r i+ lr
  KHJ34233.1 142 LLSRNVDRISTILELPALLNstiqssnqTAISTLNYTSALDLNAHVRRLHSLFPESDIIQSIENQSREAMRKMTSNLILSLKTSsLKLAGAMRLISCLR 240
                 ***************************99*****************************************************999************** PP

        Dor1 185 rv.avl.....teaeLrlkflqsrdavLekileeld 214
                 r+ ++l     +e  L + fl +r a L+++l++l+
  KHJ34233.1 241 RIsPELdssgsSEGALGSLFLTCRLAHLQNLLDALE 276
                 **98884433234459**************999885 PP

  == domain 2  score: 40.1 bits;  conditional E-value: 2.8e-14
        Dor1 217 nasellkrlieivrvnlfdvllqYraifp.degst.........lrdlaseekaagd.aifs.wvlskissflqtlermlkrg.ievslekvldqlmyf 302
                 + +++lkr+iei r ++f ++  Yr+if    +++           +l +  +++++  i+s + l+ +  f +tl+++l+   + +s++++l+q+ y+
  KHJ34233.1 304 QIEKYLKRYIEIFREQSFAIISMYRSIFLpSPSTEietrkeyknVNELGNHGSLQPNsTILStFSLHLVYIFTETLKIYLPNVgEKSSRDSLLTQVLYC 402
                 5689************************52333336678898876677777777665258889******************999*************** PP

        Dor1 303 aksfgrvgaDfrall 317
                 a s+gr g Df   l
  KHJ34233.1 403 AASLGRLGSDFSMIL 417
                 ***********6655 PP

>> DUF829  Eukaryotic protein of unknown function (DUF829)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.2      0.74   4.4e+03      35      66 ..      26      57 ..      23      89 .. 0.69
   2 ?   12.9   0.0   1.2e-05     0.073      14     116 ..     307     409 ..     305     444 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.74
      DUF829 35 spsrdllwrtkrlasaldellellsesqrsey 66
                s+ ++l++ + +++s+l++l  l  +s  se+
  KHJ34233.1 26 SSLKSLSSNNTNISSYLNHLTSLSLSSLVSEE 57
                55666677777777777777766666655555 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 1.2e-05
      DUF829  14 khlaKYsdlYrkpgativvitspsrdllwrt.krlasaldellellsesqrseywpilfhvfsngGpllylallaalqkaesfkkllpelkglvwDSaP 111
                 k+l++Y++++r++++ i+++ ++++  + +t  +++   +++ e l ++ + + +++++++fs+  +++++++l+ +  + ++k+  + l ++v+ +a+
  KHJ34233.1 307 KYLKRYIEIFREQSFAIISMYRSIFLPSPSTeIETRKEYKNVNE-LGNHGSLQPNSTILSTFSLHLVYIFTETLKIYLPNVGEKSSRDSLLTQVLYCAA 404
                 99******************999988886665444444444444.4444555568**********************9999999999999999999988 PP

      DUF829 112 gaghy 116
                 + g+ 
  KHJ34233.1 405 SLGRL 409
                 87776 PP

>> Vps51  Vps51/Vps67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   2.5   2.6e-05      0.15       1      82 [.      31     112 ..      31     117 .. 0.86
   2 ?   -1.7   0.2      0.53   3.2e+03      64      64 ..     191     191 ..     139     227 .. 0.59

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.6e-05
       Vps51   1 ldspdfdaeayvrellakstlkell.kveasllseiraldselkalVydnYskLisasdtIrkmksemdkldqklselkqais 82 
                 l+s + + ++y+++ l++ +l+ l  +  +sl ++++ l  +l+al  ++++  is s  ++++ +e++ + ++  +l++++ 
  KHJ34233.1  31 LSSNNTNISSYLNH-LTSLSLSSLVsEEPQSLSQSKQSLYLSLQALSKRSHNSIISSSTHLSNLGTELSVITESAASLRDSLP 112
                 57889999*****5.7778886665156699**************************************99999999988776 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.53
       Vps51  64 k 64 
                  
  KHJ34233.1 191 H 191
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (454 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3203.30
//
Query:       KHJ34234.1  [L=1043]
Description: putative actin cytoskeleton-regulatory complex protein sla1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-34  117.0   0.1    1.2e-33  114.7   0.0    2.1  2  SHD1      SLA1 homology domain 1, SHD1
    5.1e-31  106.0   6.5    1.1e-10   40.9   0.2    4.4  4  SH3_1     SH3 domain
    9.5e-29   99.0   6.7    1.7e-11   43.8   0.2    3.7  3  SH3_9     Variant SH3 domain
      1e-19   70.0   0.5    2.5e-05   23.9   0.0    4.4  4  SH3_2     Variant SH3 domain
    0.00047   20.1   0.0     0.0016   18.4   0.0    1.8  1  SAM_4     SAM domain (Sterile alpha motif)
     0.0017   18.4   0.1       0.34   11.0   0.0    3.1  3  SH3_10    SH3 domain
     0.0051   17.1   6.0       0.12   12.7   0.2    3.5  3  SH3_3     Bacterial SH3 domain
  ------ inclusion threshold ------
       0.15   12.0   0.0       0.32   10.9   0.0    1.5  1  LpxI_N    LpxI N-terminal domain
        0.5   10.7   2.5         14    6.0   0.2    3.6  3  SIN1_PH   SAPK-interacting protein 1 (Sin1), Pleckstrin-homol


Domain annotation for each model (and alignments):
>> SHD1  SLA1 homology domain 1, SHD1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.83   1.7e+03      47      63 ..     188     204 ..     187     207 .. 0.86
   2 !  114.7   0.0     6e-37   1.2e-33       2      66 ..     471     535 ..     470     536 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.83
        SHD1  47 pvekmskeDleyvekvt 63 
                 +v+++s+ D +yv++++
  KHJ34234.1 188 AVKRLSAVDSDYVQNHN 204
                 5899*********9986 PP

  == domain 2  score: 114.7 bits;  conditional E-value: 6e-37
        SHD1   2 kskPdpakvRtWtDrtgsFkVeAeflglkdgkirLhkvnGvkiaVpvekmskeDleyvekvtgks 66 
                 kskPdp+kvR+W+Dr++sF+VeA+fl+lkdgki+Lhk+nGvkiaVpv+kms+eDleyve+ tg s
  KHJ34234.1 471 KSKPDPSKVRIWNDRSKSFSVEAQFLALKDGKINLHKMNGVKIAVPVSKMSIEDLEYVERQTGIS 535
                 79************************************************************988 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.9   0.2   5.7e-14   1.1e-10       1      38 [.       8      46 ..       8      60 .. 0.94
   2 !   30.8   0.1   7.9e-11   1.6e-07       1      48 []      74     119 ..      74     119 .. 0.97
   3 !   34.2   0.1   7.2e-12   1.4e-08       3      47 ..     360     405 ..     358     406 .. 0.97
   4 ?    0.3   0.0      0.27   5.4e+02      14      25 ..     616     627 ..     610     632 .. 0.86

  Alignments for each domain:
  == domain 1  score: 40.9 bits;  conditional E-value: 5.7e-14
                EESSSBEXSSTTBXEBSTTEEEEEEEECSS.SEEEEEET CS
       SH3_1  1 iAlYDYeaeesdELsfkkGDviivleksed.gWwkgrlk 38
                +A+YDYe++ ++ELs+ +GDv+ +leks++  Wwk++ k
  KHJ34234.1  8 KAIYDYEPQVEGELSMVEGDVLYILEKSDEdCWWKAKKK 46
                7*****************************99****987 PP

  == domain 2  score: 30.8 bits;  conditional E-value: 7.9e-11
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEEG CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgtgkeGliPs 48 
                 +AlYDY+ ++++ELsf+++ ++ v + s+  W  + lk+  + G++Ps
  KHJ34234.1  74 RALYDYTRQTDEELSFTENSELDVYDTSDIYWILVGLKD--EYGFVPS 119
                 7*************************9999********7..8*****8 PP

  == domain 3  score: 34.2 bits;  conditional E-value: 7.2e-12
                 SSSBEXSSTTBXEBSTTEEEEEEEECSS.SEEEEEETTSTEEEEEE CS
       SH3_1   3 lYDYeaeesdELsfkkGDviivleksed.gWwkgrlkgtgkeGliP 47 
                 l+D+ a+e++E++   GD + ++++ +d +Ww++r+  +g eGl+P
  KHJ34234.1 360 LHDFSAQEDNEVTVVAGDDVLLIDDIKDeQWWRVRRLKDGSEGLVP 405
                 79******************************************** PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.27
                 XEBSTTEEEEEE CS
       SH3_1  14 LsfkkGDviivl 25 
                 L +++GD+i++ 
  KHJ34234.1 616 LGIREGDIIKIM 627
                 889*******96 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.8   0.2   8.4e-15   1.7e-11       1      49 []       9      65 ..       9      65 .. 0.88
   2 !   24.1   0.3   1.2e-08   2.4e-05       1      49 []      75     123 ..      75     123 .. 0.98
   3 !   33.1   0.1   1.9e-11   3.7e-08       2      49 .]     360     410 ..     360     410 .. 0.94

  Alignments for each domain:
  == domain 1  score: 43.8 bits;  conditional E-value: 8.4e-15
       SH3_9  1 AlypyepreddeLsLqrGDvitviee.sedgWlegs.....l..tGrtGlvPanyve 49
                A+y+yep+ + eLs+ +GDv++++e+ +ed W+ ++        ++  GlvP ny+e
  KHJ34234.1  9 AIYDYEPQVEGELSMVEGDVLYILEKsDEDCWWKAKkkaieIdgDEPVGLVPNNYIE 65
                89**********************7736899****87776534677*********97 PP

  == domain 2  score: 24.1 bits;  conditional E-value: 1.2e-08
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegsltGrtGlvPanyve 49 
                 Aly+y+ + d+eLs+ ++  + v + s+ +W+++ l+ ++G+vP+ny++
  KHJ34234.1  75 ALYDYTRQTDEELSFTENSELDVYDTSDIYWILVGLKDEYGFVPSNYIQ 123
                 8*****99999************************************97 PP

  == domain 3  score: 33.1 bits;  conditional E-value: 1.9e-11
       SH3_9   2 lypyepreddeLsLqrGDvitviee.sedgWlegsl..tGrtGlvPanyve 49 
                 l+++ ++ed e  + +GD +++i++  ++ W+++++  +G+ GlvP++yv+
  KHJ34234.1 360 LHDFSAQEDNEVTVVAGDDVLLIDDiKDEQWWRVRRlkDGSEGLVPRSYVQ 410
                 79*********************8879********668************7 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   1.2e-08   2.5e-05       2      56 ..       7      66 ..       6      67 .. 0.81
   2 !   18.0   0.0   8.7e-07    0.0017       1      56 [.      72     124 ..      72     125 .. 0.96
   3 !   19.4   0.0   3.1e-07   0.00063       3      56 ..     358     411 ..     356     412 .. 0.85
   4 ?    3.7   0.0     0.026        51      14      35 ..     614     651 ..     598     655 .. 0.73

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 1.2e-08
                EEESS-B-SCGCCB--B-TTEEEEEE..EEEECT.TEEEEEEC.......CCEEEEEGCGEEE CS
       SH3_2  2 vraiedyvgedkseLsfkkGdvikvlslgskdsd.gwwegevg.......GrvGlfPsslvee 56
                ++ai dy+++ ++eLs  +Gdv+++l   +k+++  ww++ ++         vGl+P+++ e+
  KHJ34234.1  7 YKAIYDYEPQVEGELSMVEGDVLYIL---EKSDEdCWWKAKKKaieidgdEPVGLVPNNYIEV 66
                89************************...665553779998855666644444*******987 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 8.7e-07
                 EEEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEECCCEEEEEGCGEEE CS
       SH3_2   1 yvraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegevgGrvGlfPsslvee 56 
                 y+ra+ dy+++  +eLsf+++  + v+   +++++ w+++  +  +G++Ps++ ++
  KHJ34234.1  72 YARALYDYTRQTDEELSFTENSELDVY---DTSDIYWILVGLKDEYGFVPSNYIQI 124
                 89*************************...**********999*********9986 PP

  == domain 3  score: 19.4 bits;  conditional E-value: 3.1e-07
                 EESS-B-SCGCCB--B-TTEEEEEE..EEEECT.TEEEEEE..CCCEEEEEGCGEEE CS
       SH3_2   3 raiedyvgedkseLsfkkGdvikvlslgskdsd.gwwegev..gGrvGlfPsslvee 56 
                 + + d+ ++  +e +  +Gd + ++   + + d  ww++++  +G  Gl+P+s+v++
  KHJ34234.1 358 KMLHDFSAQEDNEVTVVAGDDVLLI---DDIKDeQWWRVRRlkDGSEGLVPRSYVQI 411
                 566788888999999999**99***...6655559****99999***********96 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.026
                 CB--B-TTEEEEEE..................EEEECT CS
       SH3_2  14 seLsfkkGdvikvls................lgskdsd 35 
                 + L +++Gd+ik+ +                lg +ds+
  KHJ34234.1 614 RTLGIREGDIIKIMRfldkkffrsapkrnlgLGAEDSI 651
                 5699*********9877777777666666665555555 PP

>> SAM_4  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   7.9e-07    0.0016       9      68 ..     572     630 ..     566     640 .. 0.90

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 7.9e-07
       SAM_4   9 sewiqffkeagipaglavnyavsfvdnriqknmlldlskeimnelgitvvgdiiailkha 68 
                  +w qff +  +   l   y+ +f  + ++ ++l d++  ++  lgi   gdii i++  
  KHJ34234.1 572 NDWFQFFLDCEVSVNLCERYSQAFQRDSMDESVLPDIDATVLRTLGIR-EGDIIKIMRFL 630
                 68*********************************************8.5*******974 PP

>> SH3_10  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       3.3   6.6e+03      18      45 ..      10      40 ..       8      46 .. 0.76
   2 ?    3.6   0.0     0.034        68      15      59 ..      73     119 ..      64     124 .. 0.81
   3 !   11.0   0.0   0.00017      0.34      21      58 ..     366     405 ..     352     410 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3.3
      SH3_10 18 Lcdykqa...evsiekgeevtLldnsdrekW 45
                + dy+ +   e s+ +g+ + +l+ sd+  W
  KHJ34234.1 10 IYDYEPQvegELSMVEGDVLYILEKSDEDCW 40
                5555554455788899999999999999988 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.034
      SH3_10  15 veALcdykqa...evsiekgeevtLldnsdrekWkVqtssGaemtvPg 59 
                 ++AL dy+ +   e s+++++e+ + d sd   W +   + +   vP+
  KHJ34234.1  73 ARALYDYTRQtdeELSFTENSELDVYDTSD-IYWILVGLKDEYGFVPS 119
                 57888886554559****************.66*99999999999998 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 0.00017
      SH3_10  21 ykqaevsiekgeevtLldn.sdrekWkVqtss.GaemtvP 58 
                  +++ev++  g++v L d   d++ W+V++ + G+e  vP
  KHJ34234.1 366 QEDNEVTVVAGDDVLLIDDiKDEQWWRVRRLKdGSEGLVP 405
                 5789***********99871566678****988***9999 PP

>> SH3_3  Bacterial SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.33   6.5e+02      20      54 ..      24      64 ..      22      65 .. 0.73
   2 ?    4.5   0.1     0.021        41      21      54 ..      91     122 ..      88     123 .. 0.85
   3 !   12.7   0.2   6.1e-05      0.12      18      54 ..     372     409 ..     366     410 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.33
       SH3_3 20 pyGekVevleetgggeWykv....rtddgte..Gwvssgyl 54
                  G+++ +le+++++ W+k      + dg e  G v + y+
  KHJ34234.1 24 VEGDVLYILEKSDEDCWWKAkkkaIEIDGDEpvGLVPNNYI 64
                5789999999999977*999877744444444488888887 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.021
       SH3_3  21 yGekVevleetgggeWykvrtddgteGwvssgyl 54 
                  +++++v + ++++ W+ v   d + G+v s y+
  KHJ34234.1  91 ENSELDVYDTSDIY-WILVGLKDEY-GFVPSNYI 122
                 57889999999999.****777777.*****998 PP

  == domain 3  score: 12.7 bits;  conditional E-value: 6.1e-05
       SH3_3  18 tlpyGekVevleetgggeWykv.rtddgteGwvssgyl 54 
                 t+ +G+ V ++++ ++++W++v r  dg+eG v  +y+
  KHJ34234.1 372 TVVAGDDVLLIDDIKDEQWWRVrRLKDGSEGLVPRSYV 409
                 7889999999**99*999****9999999******998 PP

>> LpxI_N  LpxI N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00016      0.32      22      91 ..     298     367 ..     287     383 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00016
      LpxI_N  22 agrevvvvalegeadeelekivdevaevsvgqlgklikaLkregvtevvmaGkvekpklldlrpDlralk 91 
                 +g++v++  ++ + + ++ + ++++a+  v++lg+l  a + eg +ev+maG+ + +k  ++++D++a +
  KHJ34234.1 298 EGKHVFLELVQPNKSIDFHAGAKDTAQEIVAALGELAGAVRAEGLREVIMAGSSRAQKTGKMLHDFSAQE 367
                 567777777777778888888888888889*************************999999999998865 PP

>> SIN1_PH  SAPK-interacting protein 1 (Sin1), Pleckstrin-homology
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.2    0.0072        14      84     104 ..     310     330 ..     239     334 .. 0.67
   2 ?   -1.9   0.1       2.1   4.1e+03      24      53 ..     460     491 ..     435     512 .. 0.54
   3 ?   -2.2   0.0       2.5     5e+03      20      45 ..     614     636 ..     611     641 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0072
     SIN1_PH  84 fKrydfeadsakeAeeIvnki 104
                  K+ df a  +++A+eIv+ +
  KHJ34234.1 310 NKSIDFHAGAKDTAQEIVAAL 330
                 588999999999999999876 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.1
     SIN1_PH  24 Idgekieidpvknkkka..tkfwaksqKtvsy 53 
                   +e i +  +k+k      ++w++++K  s+
  KHJ34234.1 460 SQNETISLSNLKSKPDPskVRIWNDRSKSFSV 491
                 33333333333333322223344444444444 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2.5
     SIN1_PH  20 vtLaId.gekieidpvknkkkatkfwa 45 
                 +tL+I  g+ i+i+ + +    +kf+ 
  KHJ34234.1 614 RTLGIReGDIIKIMRFLD----KKFFR 636
                 79999559******9888....34555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1043 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       851  (0.047465); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.75u 0.25s 00:00:01.00 Elapsed: 00:00:00.41
# Mc/sec: 7571.57
//
Query:       KHJ34235.1  [L=165]
Description: hypothetical protein EV44_g3250 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (165 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       989  (0.055162); expected 358.6 (0.02)
Passed bias filter:                      533  (0.0297284); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1221.04
//
Query:       KHJ34236.1  [L=132]
Description: hypothetical protein EV44_g3238 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1085  (0.0605165); expected 358.6 (0.02)
Passed bias filter:                      696  (0.0388198); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 971.62
//
Query:       KHJ34237.1  [L=2701]
Description: putative chromosome segregation atpase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.018   14.9  11.1         15    5.5   0.0    7.9  8  DUF86      Protein of unknown function DUF86
      0.038   13.7   1.2         97    2.6   0.0    5.3  6  AphA_like  Putative AphA-like transcriptional regulator
       0.46   10.5   5.4         22    5.0   2.1    4.2  3  DUF3907    Protein of unknown function (DUF3907)
       0.54   10.2   4.7         32    4.5   0.0    4.7  3  ApoO       Apolipoprotein O
       0.75    9.8  13.8        8.7    6.4   0.1    5.9  5  Cbl_N      CBL proto-oncogene N-terminal domain 1
        6.4    6.9  27.8        1.6    8.9   0.2    8.7  9  DUF2730    Protein of unknown function (DUF2730)


Domain annotation for each model (and alignments):
>> DUF86  Protein of unknown function DUF86
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.99     3e+03      97     118 ..    1010    1031 ..    1008    1032 .. 0.89
   2 ?    1.5   0.0     0.085   2.5e+02      95     117 ..    1039    1061 ..    1033    1063 .. 0.87
   3 ?    2.5   0.0     0.043   1.3e+02      89     117 ..    1188    1216 ..    1183    1218 .. 0.90
   4 ?    5.5   0.0    0.0049        15      89     117 ..    1250    1278 ..    1245    1280 .. 0.92
   5 ?    1.4   0.0     0.089   2.7e+02      89     117 ..    1343    1371 ..    1338    1373 .. 0.90
   6 ?    2.3   0.0     0.047   1.4e+02      89     117 ..    1405    1433 ..    1400    1435 .. 0.91
   7 ?   -2.0   0.1       1.1   3.2e+03       2      45 ..    2086    2132 ..    2085    2141 .. 0.74
   8 ?   -3.2   0.3       2.5   7.5e+03      24      75 ..    2384    2435 ..    2366    2440 .. 0.64

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.99
                  THHHHHHHHHHTCHHHHHHHHH CS
       DUF86   97 dpeivwsiikenlpdleefles 118 
                  d  i+ ++i+++++ ++e++ s
  KHJ34237.1 1010 DQMIILDTIRDDIENIKEAVSS 1031
                  7889*************99876 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.085
                  CTTHHHHHHHHHHTCHHHHHHHH CS
       DUF86   95 gidpeivwsiikenlpdleefle 117 
                  ++d+e++ ++ik++l+ l+e + 
  KHJ34237.1 1039 ELDKEEIIDTIKDELQSLKETMS 1061
                  79****************99875 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.043
                  HHT-CCCTTHHHHHHHHHHTCHHHHHHHH CS
       DUF86   89 LvHgYlgidpeivwsiikenlpdleefle 117 
                  LvH+  ++d++++ ++ik+ l+ l+e + 
  KHJ34237.1 1188 LVHNRSELDKDEIIDTIKDGLEGLKETMS 1216
                  89999******************999876 PP

  == domain 4  score: 5.5 bits;  conditional E-value: 0.0049
                  HHT-CCCTTHHHHHHHHHHTCHHHHHHHH CS
       DUF86   89 LvHgYlgidpeivwsiikenlpdleefle 117 
                  LvH+  ++d+e++ ++ik++ + l+e + 
  KHJ34237.1 1250 LVHDRSELDKEEILDTIKDEFESLKETIS 1278
                  9************************9886 PP

  == domain 5  score: 1.4 bits;  conditional E-value: 0.089
                  HHT-CCCTTHHHHHHHHHHTCHHHHHHHH CS
       DUF86   89 LvHgYlgidpeivwsiikenlpdleefle 117 
                  LvH+  ++d++++ ++ik+ l+ l+e + 
  KHJ34237.1 1343 LVHNRSELDKNEIIDTIKDGLEGLKETMS 1371
                  89999*****************9999876 PP

  == domain 6  score: 2.3 bits;  conditional E-value: 0.047
                  HHT-CCCTTHHHHHHHHHHTCHHHHHHHH CS
       DUF86   89 LvHgYlgidpeivwsiikenlpdleefle 117 
                  LvH+  ++d++++ ++ik+ l+ l+e + 
  KHJ34237.1 1405 LVHDRSELDKNEIIDTIKDGLEGLKETMS 1433
                  9**********************999876 PP

  == domain 7  score: -2.0 bits;  conditional E-value: 1.1
                  HHHHHHHCCHH...TSTSCCG....SHHHHHHHHHHHHHHHHHHHHHH CS
       DUF86    2 kealeklkefteeldeeefls....deleydavernlqvigEaaidia 45  
                  +e l+ ++ f+ e  e++f++    +++   a+er l  + E +++ a
  KHJ34237.1 2086 NETLRAIQNFL-EEFEDTFKKkmgdSFKSTEALERLLKDCSETITRNA 2132
                  56777777777.555788887688788888889988888888877655 PP

  == domain 8  score: -3.2 bits;  conditional E-value: 2.5
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----SSCHHHHHHHTTSS-HHH CS
       DUF86   24 eleydavernlqvigEaaidiakhlakklgikkpgdyifeilaekgviaeep 75  
                  e+    ++++   + E  ++  k++ +++  kk  ++ ++++ e+++ ++e+
  KHJ34237.1 2384 EKIHQQLKKTAAEVSEYFNKQTKQIYDDFEEKKRATEEVSNILERKIAQKES 2435
                  5555566666677777777777888888888888888444444444444444 PP

>> AphA_like  Putative AphA-like transcriptional regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.79   2.3e+03      45     109 ..     923     989 ..     897    1001 .. 0.71
   2 ?   -2.2   0.0         1     3e+03      60     103 ..    1063    1104 ..    1049    1112 .. 0.82
   3 ?    1.4   0.0     0.076   2.3e+02      67     103 ..    1161    1197 ..    1141    1205 .. 0.86
   4 ?   -0.1   0.0      0.22   6.4e+02      52     103 ..    1303    1352 ..    1294    1360 .. 0.81
   5 ?    2.6   0.0     0.033        97      67     103 ..    1378    1414 ..    1356    1422 .. 0.83
   6 ?    1.4   0.0     0.079   2.4e+02      67     115 ..    1471    1521 ..    1453    1526 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.79
   AphA_like  45 sldLlgsslellreeGLveavdGeGmednal.LaiteaGrrelqaLltanlraplsd..lsklviaLk 109
                 s +L+ s +  lre  L  ++  +  ++n+  +a  e+G + ++++++  l  p s+   +k+ iaLk
  KHJ34237.1 923 SPELVLSEIKNLREILLATTI-PNSEDRNLNiVASLEDGLESVKQMISSSLILPGSTndENKVLIALK 989
                 556777777777777666666.4444556552577899*********999987766544899999999 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1
   AphA_like   60 GLveavdGeGmednalLaiteaGrrelqaLltanlraplsdlsk 103 
                   Lv +   +G++++  L + ++G  ++++ ++  + +++s l++
  KHJ34237.1 1063 ALVPSS--SGLDRSDILCVINDGFDNIKESISSSIIPSSSMLGR 1104
                  555444..89*************************999998987 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.076
   AphA_like   67 GeGmednalLaiteaGrrelqaLltanlraplsdlsk 103 
                   +G+e++  L++ ++G  ++++ ++  l    s+l+k
  KHJ34237.1 1161 SSGLERDFILSVINDGFDNIKETMSTSLVHNRSELDK 1197
                  48**************************999999987 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.22
   AphA_like   52 slellreeGLveavdGeGmednalLaiteaGrrelqaLltanlraplsdlsk 103 
                  sl  +    Lv     +G++++  L++ ++G  ++++ ++  l    s+l+k
  KHJ34237.1 1303 SLKDIMSASLVPN--SSGIDRDDILGVINDGFDNIKETMSTSLVHNRSELDK 1352
                  5555555666654..49**************************999999987 PP

  == domain 5  score: 2.6 bits;  conditional E-value: 0.033
   AphA_like   67 GeGmednalLaiteaGrrelqaLltanlraplsdlsk 103 
                   +G+e+++ L++ ++G  ++++ ++  l    s+l+k
  KHJ34237.1 1378 SSGLERDVILSVINDGFDNIKETMSTSLVHDRSELDK 1414
                  48**************************999999987 PP

  == domain 6  score: 1.4 bits;  conditional E-value: 0.079
   AphA_like   67 GeGmednalLaiteaGrrelqaLltanlraplsdlsk..lviaLklrfLdL 115 
                   +G++++  L + ++G  +++++++a + + +s+ +k      +k   LdL
  KHJ34237.1 1471 SSGIDRDEILCVINGGFDNIKEIMSASITPNSSEQDKeeFLDVIKTELLDL 1521
                  589***************************999855411445566666666 PP

>> DUF3907  Protein of unknown function (DUF3907)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       2.8   8.5e+03      15      55 ..     581     621 ..     568     625 .. 0.65
   2 ?    3.2   0.0     0.026        79     112     143 ..     886     917 ..     883     920 .. 0.90
   3 ?    5.0   2.1    0.0074        22       2      67 ..    2384    2448 ..    2383    2457 .. 0.76

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.8
     DUF3907  15 leeflnettlesllkeeeeeeeyykgllsdlRrllvfseeg 55 
                 +++ l e+  +s+ + + ++   y+++l+ +R  +v  +++
  KHJ34237.1 581 VDQILREYRRQSVSSLASKTIVDYQEILNAVRDAVVKIDQS 621
                 34444444445555555666778999999999998887776 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.026
     DUF3907 112 frkkvveslkdlllslekefeelReeLeyYet 143
                 f+k+  +++kd +++++++ ++lRee+e+ ++
  KHJ34237.1 886 FKKSSGHEVKDTIEDIKNKIDSLREEVEWLTS 917
                 8889999********************98765 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.0074
     DUF3907    2 eetkekLkkaveeleeflnettlesllkeeeeeeeyykgllsdlRrllvfseegleklrvllrrek 67  
                  e+++++Lkk+++e++e++n++t +++  + ee+++  +++ + l r +   e++ +++  l ++e+
  KHJ34237.1 2384 EKIHQQLKKTAAEVSEYFNKQT-KQIYDDFEEKKRATEEVSNILERKIAQKESAEDTVFALRQEEE 2448
                  78899***************99.6677777888888787777777766667766666666666655 PP

>> ApoO  Apolipoprotein O
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.53   1.6e+03      15      59 ..     845     908 ..     833     918 .. 0.51
   2 ?    4.5   0.0     0.011        32      10      54 ..    2179    2223 ..    2164    2242 .. 0.83
   3 ?    3.4   0.5     0.023        68       4      59 ..    2371    2426 ..    2368    2441 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.53
        ApoO  15 rLeegvrslRkslepytsavqdel...................nkvkskvetaeqsvtdtiasL 59 
                 +Le   +++ k+l++ t+ +++ l                   ++  + v+++ + ++++i+sL
  KHJ34237.1 845 ELEIVSKEAKKNLYSSTDVTEKLLetirdgiekihldmgeffkKSSGHEVKDTIEDIKNKIDSL 908
                 4555555555555555555555553333333333333333333444445555555555555555 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.011
        ApoO   10 eeptdrLeegvrslRkslepytsavqdelnkvkskvetaeqsvtd 54  
                  e++ d+L ++++ +R+++e  t+  ++++n+++  ++++ ++++d
  KHJ34237.1 2179 EKKFDNLLSKCNDTRLFMEGATNLSEEKMNQIEATLHETLTTTED 2223
                  678899***************************999988776654 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.023
        ApoO    4 svrtpseeptdrLeegvrslRkslepytsavqdelnkvkskvetaeqsvtdtiasL 59  
                  ++ ++s ++ d+Le+  ++l k++ + ++ ++++++++++ +e++++ +++  + L
  KHJ34237.1 2371 NIASKSFSQLDMLEKIHQQLKKTAAEVSEYFNKQTKQIYDDFEEKKRATEEVSNIL 2426
                  55556667789999999999999999999999999999999999998887765555 PP

>> Cbl_N  CBL proto-oncogene N-terminal domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1      0.89   2.7e+03      41      85 ..     389     433 ..     383     443 .. 0.72
   2 ?    4.0   0.1     0.016        48      35     101 ..    1558    1624 ..    1552    1640 .. 0.77
   3 ?    0.2   0.1      0.23     7e+02      60      94 ..    2173    2206 ..    2111    2222 .. 0.57
   4 ?    6.4   0.1    0.0029       8.7      12      60 ..    2227    2275 ..    2215    2286 .. 0.82
   5 ?    2.9   0.5     0.034     1e+02      27     100 ..    2341    2418 ..    2326    2459 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.89
                 HHHHHHHHHHHS..-HHHHTT-HHHHHHHHHHHHHHHHHHHHHHT CS
       Cbl_N  41 taqlLrevaekrrekeealseaeylriflanllkkskqvakLfke 85 
                 + + Lre+a+++ +++   + ++yl+   ++ +kk++ ++ L+k+
  KHJ34237.1 389 LEKVLREMATREGQERVLSQISNYLTHNENSTEKKVDDLIVLIKS 433
                 445566666655444444677899999999999999999999986 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.016
                  HHHHHHHHHHHHH.HHHHS..-HHHHTT-HHHHHHHHHHHHHHHHHHHHHHTTHHHHT-TTSHHHHHH CS
       Cbl_N   35 ldllpdtaqlLre.vaekrrekeealseaeylriflanllkkskqvakLfkeakeklfeeeselRrqL 101 
                    +lp+ ++l+++ ++ + +e+ + ++  ++ ++  +n+++  ++v++ f+++ +++ +e+s  R + 
  KHJ34237.1 1558 SSILPSCSDLIKDdILGTIKEDLDDIK-EKFSTFLASNFASSKNEVSEKFEDGTDNMIKESSMRRDSV 1624
                  556666666665325555555555544.4677788889999999****************99999765 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.23
                  TT-HHHHHHHHHHHHHHHHHHHHHHTTHHHHT-TT CS
       Cbl_N   60 seaeylriflanllkkskqvakLfkeakeklfeee 94  
                  +  e ++  ++nll+k++ + +Lf e++ +l ee+
  KHJ34237.1 2173 KIEEIFEKKFDNLLSKCNDT-RLFMEGATNLSEEK 2206
                  34456667778888888775.56655544444443 PP

  == domain 4  score: 6.4 bits;  conditional E-value: 0.0029
                  HHHHHHHHTT-SSS---SSSS-HHHHHHHHHHHHHHHHHHS..-HHHHT CS
       Cbl_N   12 lldkleklcqdprlnLknspPylldllpdtaqlLrevaekrrekeeals 60  
                  l d+l++  +++r+ L +++  ++d + +t+++L+ev + +++++++ +
  KHJ34237.1 2227 LADNLTTSLTESRIILDKGTHLITDRVDETYARLKEVHTDTKAEHQQTR 2275
                  457899999*****************************99988666544 PP

  == domain 5  score: 2.9 bits;  conditional E-value: 0.034
                  --SSSS-HHHHHHHH....HHHHHHHHHHS..-HHHHTT-HHHHHHHHHHHHHHHHHHHHHHTTHHHHT-TTSHHHHH CS
       Cbl_N   27 LknspPylldllpdt....aqlLrevaekrrekeealseaeylriflanllkkskqvakLfkeakeklfeeeselRrq 100 
                  L  spP+l++l + +     ++L ++++  + ++++ s+ + l+   ++l k + +v++ f +  ++++++  e +r 
  KHJ34237.1 2341 LLPSPPSLPNLDSYIdnsaHEKLDRLVNGMNIASKSFSQLDMLEKIHQQLKKTAAEVSEYFNKQTKQIYDDFEEKKRA 2418
                  567999998875443111167899999999889999*************************99999***998777776 PP

>> DUF2730  Protein of unknown function (DUF2730)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.012        36      28      62 ..     884     918 ..     875     936 .. 0.84
   2 ?   -0.5   0.1      0.44   1.3e+03      35      84 ..    1726    1775 ..    1707    1789 .. 0.83
   3 ?    0.3   0.1      0.25   7.3e+02      68      92 ..    1793    1817 ..    1776    1825 .. 0.63
   4 ?    0.6   0.1       0.2   6.1e+02      61      82 ..    1894    1915 ..    1859    1918 .. 0.62
   5 ?    6.5   0.4    0.0029       8.6      29      82 ..    1892    1943 ..    1885    1949 .. 0.89
   6 ?    8.9   0.2   0.00052       1.6      27      94 ..    1918    1983 ..    1916    1988 .. 0.92
   7 ?    3.2   0.2     0.032        95      31      79 ..    2015    2064 ..    1994    2078 .. 0.83
   8 ?    0.3   0.4      0.26   7.7e+02      21      74 ..    2178    2233 ..    2172    2249 .. 0.75
   9 ?   -1.1   0.1      0.67     2e+03      38      84 ..    2249    2297 ..    2237    2305 .. 0.69

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.012
     DUF2730  28 kYakredleklaekveendkrlteletkvenLPta 62 
                  + k++  +++++++e++++++++l  +ve L + 
  KHJ34237.1 884 EFFKKSSGHEVKDTIEDIKNKIDSLREEVEWLTSS 918
                 58899************************998765 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.44
     DUF2730   35 leklaekveendkrlteletkvenLPtakdlekLkllladlrgelkalea 84  
                  l+ l+++++++++ +t  ++ ++++   + ++++k+ l++++ e+ +++ 
  KHJ34237.1 1726 LQALQKSIDNIKEEITIKKSLIDQFSVDEIVDTIKTGLSNVQVEIGKVAD 1775
                  67788889999999999999999999999999999999999998887764 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.25
     DUF2730   68 Lkllladlrgelkaleaevrqlshq 92  
                  Lk  l+++r ++++l+++++ ++  
  KHJ34237.1 1793 LKDGLENVRINIHQLQKSIEDIKSE 1817
                  5556666666666666666665543 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.2
     DUF2730   61 takdlekLkllladlrgelkal 82  
                   ++dle+L+ l++d++++++++
  KHJ34237.1 1894 KKEDLEALENLINDTKAKFDDI 1915
                  3566666666666666666554 PP

  == domain 5  score: 6.5 bits;  conditional E-value: 0.0029
     DUF2730   29 YakredleklaekveendkrlteletkvenLPtakdlekLkllladlrgelkal 82  
                   +k+edle l++ +++++ + ++++++  ++ ++kdle ++ l+++++++++++
  KHJ34237.1 1892 CIKKEDLEALENLINDTKAKFDDIDST--QFLNKKDLEVIENLVRNTKAKFDDI 1943
                  58********************99885..7789****************99876 PP

  == domain 6  score: 8.9 bits;  conditional E-value: 0.00052
     DUF2730   27 skYakredleklaekveendkrlteletkvenLPtakdlekLkllladlrgelkaleaevrqlshqvd 94  
                  +++  ++dle +++ v++++ + ++++ k  ++ +++dl+ L+ll+ +++ +l++l+a+++ +s++ d
  KHJ34237.1 1918 TQFLNKKDLEVIENLVRNTKAKFDDIDFK--QFLNKDDLNPLELLIGGTQDDLSNLAAHLEDVSKKED 1983
                  78999*******************98765..889*****************************99877 PP

  == domain 7  score: 3.2 bits;  conditional E-value: 0.032
     DUF2730   31 kredleklaekveendkrltel.etkvenLPtakdlekLkllladlrgel 79  
                   + d+  ++ + +e++ +l+++ +t++++L +++d  +L+ ++++++ ++
  KHJ34237.1 2015 TKLDIFAVESVCSEIKCKLDKMpNTEISSLVSKEDYMNLESQVQEIKDQI 2064
                  57788899888999999999996689999999***999999999998776 PP

  == domain 8  score: 0.3 bits;  conditional E-value: 0.26
     DUF2730   21 illlldskYakredleklaekvee.ndkrlteletkv.enLPtakdlekLklllad 74  
                  +  ++d+   k +d    +e +++  +++++++e+++ e+L t++d++ L  +l+ 
  KHJ34237.1 2178 FEKKFDNLLSKCNDTRLFMEGATNlSEEKMNQIEATLhETLTTTEDVKLLADNLTT 2233
                  55667777777788887777665526899*****9995579999999988877765 PP

  == domain 9  score: -1.1 bits;  conditional E-value: 0.67
     DUF2730   38 laekveendkrltel..etkvenLPtakdlekLkllladlrgelkalea 84  
                  +++ v+e+  rl+e+  +tk e+  t+++++k+   +++++  lk+ ++
  KHJ34237.1 2249 ITDRVDETYARLKEVhtDTKAEHQQTRDNINKILCMIEGIDSTLKENSP 2297
                  5667777777777641156677777777777777777777777776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2701 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2437  (0.135925); expected 358.6 (0.02)
Passed bias filter:                      580  (0.0323498); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 1.65u 0.32s 00:00:01.97 Elapsed: 00:00:00.56
# Mc/sec: 14633.88
//
Query:       KHJ34238.1  [L=385]
Description: putative dehydrodolichyl diphosphate synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.6e-80  268.3   0.0    7.2e-80  267.7   0.0    1.3  1  Prenyltransf  Putative undecaprenyl diphosphate synthase


Domain annotation for each model (and alignments):
>> Prenyltransf  Putative undecaprenyl diphosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  267.7   0.0     4e-84   7.2e-80       1     224 []      46     369 ..      46     369 .. 0.81

  Alignments for each domain:
  == domain 1  score: 267.7 bits;  conditional E-value: 4e-84
                   EE--HHHHHHHTT.S-HHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEEGGGGGS-HHHHHHHHHHHH...HHHHHHHHHHHHHT.TEEEEEESSGG CS
  Prenyltransf   1 imDGNrRwAkkrgleereeGhkaGaealkeilelclelgvkvvtvYafSteNfkRskeevdalmellk...eellkeelkellke.gvrvrviGdle 93 
                   +mDGNrR+A+  ++e++e Gh+ G+eal++ile+c+++gvkvvtvYafS+eNf+Rsk+evdalme++k   ++l +++  ell++ g+++rv+G+++
    KHJ34238.1  46 VMDGNRRFARLYQMETVE-GHNLGFEALAKILEVCYKSGVKVVTVYAFSIENFNRSKYEVDALMEMAKiklSQLSQHG--ELLERyGACIRVLGQKN 139
                   8************88888.************************************************98887788888..888888*********** PP

                   GS-HHHHHHHHHHHHHHT.TTTSEEEEEEEEE-HHHHHHHHHHHHHHTT................................................ CS
  Prenyltransf  94 llpedvlealekaeeatkknnkklvlniavnYgsrdeiveavrelvkeks............................................... 143
                   ll++dvl+a+e+a++ tk nn ++ lni+++Y+srde+++a+r++v ++s                                               
    KHJ34238.1 140 LLKPDVLQAIEEAVNLTK-NNGDCSLNICFPYTSRDEMTTAIRSVVVDYSkpltlqtrpfsqrrishrirsrniqmhddrsispvtlngfevddsed 235
                   ******************.5556**********************9999888888888888888888888777777777777777777777776666 PP

                   .........................SSSGGGHSH.....................................HHHHCTSTT..TSSS-SEEEEESS-- CS
  Prenyltransf 144 ........................eekkkeeide.....................................etlekhlytakalpdpDlliRtsGee 179
                                           e        +                                     e le++l ta++ p++ lliRtsG++
    KHJ34238.1 236 ktkvlklesttdeseyssttpselE--------SsskdssintpvtfpldqephlhddksyvfpdsesidsEVLESYLFTAND-PPLSLLIRTSGVK 323
                   6555555555444444444443330........04444444444444444444555555555555555555*********998.************* PP

                   S-TTSSTTTTTT-E..EEEESSSGGG--HHHHHHHHHHHHHCHHHTT CS
  Prenyltransf 180 RlSnFllwqlayse..lyfldvlWPdfskedllealleyqkrerrfg 224
                   RlS+F+lwq ++++  ++fld+lWPdf+ + +l++l e+q++++r+g
    KHJ34238.1 324 RLSDFMLWQ-CHENtsIVFLDCLWPDFDLWAFLPVLIEWQWKQKRLG 369
                   *********.555559****************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       580  (0.0323498); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2775.18
//
Query:       KHJ34239.1  [L=186]
Description: hypothetical protein EV44_g5288 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        4.3    7.6  11.0       0.31   11.3   5.4    2.2  2  MPLKIP    M-phase-specific PLK1-interacting protein


Domain annotation for each model (and alignments):
>> MPLKIP  M-phase-specific PLK1-interacting protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.3      0.69   1.2e+04      20      25 ..       2       7 ..       2       7 .. 0.88
   2 ?   11.3   5.4   1.7e-05      0.31      20      32 ..     173     185 ..     134     186 .] 0.84

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 0.69
      MPLKIP 20 sYfkpS 25
                +Y++pS
  KHJ34239.1  2 EYYQPS 7 
                6****9 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 1.7e-05
      MPLKIP  20 sYfkpSMLEDPWa 32 
                 +Y++pS+ EDPW+
  KHJ34239.1 173 DYYDPSFNEDPWE 185
                 8***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1369.90
//
Query:       KHJ34240.1  [L=156]
Description: hypothetical protein EV44_g1371 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-07   32.2   0.1    1.9e-07   31.3   0.1    1.4  1  SAP30_Sin3_bdg  Sin3 binding region of histone deacetylase co


Domain annotation for each model (and alignments):
>> SAP30_Sin3_bdg  Sin3 binding region of histone deacetylase complex subunit SAP30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.1   1.1e-11   1.9e-07      21      53 ..     109     141 ..     104     142 .. 0.93

  Alignments for each domain:
  == domain 1  score: 31.3 bits;  conditional E-value: 1.1e-11
  SAP30_Sin3_bdg  21 gsskeqLaeaVarHFkaqpvdEkevitsFlyav 53 
                       sk+qLa+aV +HFk++ + E++v+++Fly+v
      KHJ34240.1 109 RQSKDQLADAVCNHFKCMGIVENDVVVEFLYKV 141
                     679****************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1203.61
//
Query:       KHJ34241.1  [L=197]
Description: putative kinetochore protein spc24 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.9e-32  109.3   0.4    2.1e-30  105.0   0.0    2.1  2  Spc24     Spc24 subunit of Ndc80
     0.0033   15.6   1.0     0.0044   15.3   1.0    1.1  1  HOOK      HOOK protein
  ------ inclusion threshold ------
      0.018   14.8   1.7      0.054   13.3   1.7    1.7  1  CdvA      CdvA-like coiled-coil domain
      0.025   14.0   0.3      0.041   13.3   0.3    1.4  1  YjcZ      YjcZ-like protein
       0.05   12.8   3.1      0.064   12.5   3.1    1.1  1  LegC3_N   LegC3 N-terminal coiled-coil domain
       0.21   12.1   3.7       0.39   11.2   3.7    1.5  1  APG6_N    Apg6 coiled-coil region
        0.6   10.4   4.9         14    6.0   4.9    2.2  1  DUF4164   Domain of unknown function (DUF4164)
       0.69   10.3   5.7        1.3    9.4   0.5    2.6  3  CLZ       C-terminal leucine zipper domain of cyclic nucleoti


Domain annotation for each model (and alignments):
>> Spc24  Spc24 subunit of Ndc80
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.1     0.076   1.7e+02      19      43 ..      44      68 ..      24      82 .. 0.66
   2 !  105.0   0.0   9.5e-34   2.1e-30       2     105 .]      85     196 ..      84     196 .. 0.93

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.076
       Spc24 19 elesleselaelkeeleeleeesee 43
                 + +++s+l++l ++l +l+++ +e
  KHJ34241.1 44 RVRECRSTLNKLSRTLITLNTQYSE 68
                3566778888888888888888777 PP

  == domain 2  score: 105.0 bits;  conditional E-value: 9.5e-34
       Spc24   2 ldnekfriakelsdleselesleselaelkeeleeleeesee....keser...vedetllklklYrsLGielekd....vnkvlirnkekgdvnvlnl 89 
                 ld+ekfr+ak+++d+e+e e+l+s+la+l+++ +ele ++ +        r   v+de +lklk+Yr LGiel+k       k++irn++kgdv +lnl
  KHJ34241.1  85 LDTEKFRVAKSANDIEMECERLSSQLADLQSRHHELELQGPDggegI---RkglVNDEITLKLKVYRGLGIELNKVteggAFKAIIRNDSKGDVIILNL 180
                 89****************************************64332...266799*****************888888899***************** PP

       Spc24  90 ddklseffianyiWdk 105
                 d+k+s+ff+an iW++
  KHJ34241.1 181 DNKFSRFFYANLIWQN 196
                 **************96 PP

>> HOOK  HOOK protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   1.0     2e-06    0.0044     193     281 ..      32     121 ..      17     125 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2e-06
        HOOK 193 kqlsllqeEknaLlaenkklqerlsele...ngeesgtiqltskkylelqkqleqlqeelfrlEtarddyrlkceelekevlelqqrneelt 281
                 + l++lq+ +   + e ++  ++ls++    n++ s+t+  ts+      +++ +l  e fr+ ++ +d+ + ce l  ++++lq+r++el+
  KHJ34241.1  32 ESLTTLQQARDLRVRECRSTLNKLSRTLitlNTQYSETV--TSHPTEVHASEIAALDTEKFRVAKSANDIEMECERLSSQLADLQSRHHELE 121
                 556666666666666666666666655543333333333..666666677899************************************997 PP

>> CdvA  CdvA-like coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.7   2.4e-05     0.054      30     112 ..      26     110 ..       8     121 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.4e-05
        CdvA  30 alkklkekakelkeklkkrlkeledqikslekalanlkisyasGEi..dEeaYksaieairellesaleekeeikklleklskle 112
                 al++++e   +l++  + r++e+++ +++l+++l++l  +y       + e + s+i a+++++ ++ ++ ++i+   e+ls+  
  KHJ34241.1  26 ALSRINESLTTLQQARDLRVRECRSTLNKLSRTLITLNTQYSETVTshPTEVHASEIAALDTEKFRVAKSANDIEMECERLSSQL 110
                 789999999********************************87655115678999999999999999999999999999996544 PP

>> YjcZ  YjcZ-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.3   1.8e-05     0.041      66     118 ..      20      76 ..       8      92 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.8e-05
        YjcZ  66 ldpghLALttiaqrlallsqtlaek....asaapklaqalaalaeefaarverkeka 118
                 ++p +LAL++i++ l++l+q    +     s+ +kl++ l  l +++++ v+ +   
  KHJ34241.1  20 IQPDKLALSRINESLTTLQQARDLRvrecRSTLNKLSRTLITLNTQYSETVTSHPTE 76 
                 6799***************98764411114566778888888899998887766555 PP

>> LegC3_N  LegC3 N-terminal coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   3.1   2.8e-05     0.064      89     189 ..      20     121 ..       3     126 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.8e-05
                 HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHT.T---------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     LegC3_N  89 erkdkkqkekLtreleaikaekseyerellllelkler.llesqtkvevtqhsqpvvkkllsssshsatierlelslqdleekirsllerevnikkeLk 186
                  + dk   +++ + l ++++ ++   re++ + +kl+r l+  +t+ + t  s+p+ ++ ++   +  +  r+ +s +d+e   + l+ +  + + + +
  KHJ34241.1  20 IQPDKLALSRINESLTTLQQARDLRVRECRSTLNKLSRtLITLNTQYSETVTSHPTEVHASEIAALDTEKFRVAKSANDIEMECERLSSQLADLQSRHH 118
                 5568888899999*****************9999988724566888888888899999999999999999**********************9999999 PP

                 HHH CS
     LegC3_N 187 ele 189
                 ele
  KHJ34241.1 119 ELE 121
                 998 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   3.7   0.00017      0.39      18      96 ..      45     122 ..      24     125 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00017
      APG6_N  18 leqaekerdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealee 96 
                 +++ ++  +++++ l +l+++ +e+  + + +e    e+++l+ e+ +  +  +++e e e+l ++la+l++ + +le 
  KHJ34241.1  45 VRECRSTLNKLSRTLITLNTQYSETV-TSHPTEVHASEIAALDTEKFRVAKSANDIEMECERLSSQLADLQSRHHELEL 122
                 44444444444444555555533332.5556667778899999999999999999999999999999999999888875 PP

>> DUF4164  Domain of unknown function (DUF4164)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   4.9    0.0063        14       9      74 ..      26     115 ..      19     120 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0063
     DUF4164   9 altrLeaaldsLEkavdrrleaerkr........................deleaeiealgedrsRLaeeLdqaearaarleevnrEvsr 74 
                 al+r++++l++L +a d r+++ r++                        +  ++ei+al+ ++ R a+   + e++++rl++  +++++
  KHJ34241.1  26 ALSRINESLTTLQQARDLRVRECRSTlnklsrtlitlntqysetvtshptEVHASEIAALDTEKFRVAKSANDIEMECERLSSQLADLQS 115
                 67777777777777777777777777777777777777777777777776677899************************9988777766 PP

>> CLZ  C-terminal leucine zipper domain of cyclic nucleotide-gated channels
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.7   0.6      0.15   3.4e+02      33      68 ..      27      62 ..       3      65 .. 0.78
   2 ?    2.5   0.4     0.082   1.8e+02      27      47 ..      46      66 ..      27      76 .. 0.53
   3 ?    9.4   0.5   0.00057       1.3      15      50 ..      85     120 ..      83     123 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.7 bits;  conditional E-value: 0.15
         CLZ 33 verLessLeaLqtrlarLlaeyessqrkLkqRitkL 68
                ++r+++sL +Lq+     ++e  s+ +kL + +  L
  KHJ34241.1 27 LSRINESLTTLQQARDLRVRECRSTLNKLSRTLITL 62
                568888888888877777788888888877766655 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.082
         CLZ 27 keleekverLessLeaLqtrl 47
                +e  + +++L  +L +L+t++
  KHJ34241.1 46 RECRSTLNKLSRTLITLNTQY 66
                233344455555555555554 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00057
         CLZ  15 LDeeaakagaeqkeleekverLessLeaLqtrlarL 50 
                 LD+e+    + ++++e  +erL s+L  Lq r   L
  KHJ34241.1  85 LDTEKFRVAKSANDIEMECERLSSQLADLQSRHHEL 120
                 7888445557899******************98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       907  (0.0505884); expected 358.6 (0.02)
Passed bias filter:                      615  (0.034302); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1422.99
//
Query:       KHJ34242.1  [L=509]
Description: putative mfs transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-19   70.1  31.0    2.1e-19   69.7  28.9    2.0  2  MFS_1         Major Facilitator Superfamily
    2.4e-11   43.6   9.2    2.4e-11   43.6   9.2    2.0  2  Nodulin-like  Nodulin-like


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.7  28.9   2.3e-23   2.1e-19       4     340 ..      16     423 ..      12     427 .. 0.76
   2 !    4.1   0.1     0.002        18     121     167 ..     410     481 ..     408     499 .. 0.80

  Alignments for each domain:
  == domain 1  score: 69.7 bits;  conditional E-value: 2.3e-23
       MFS_1   4 aaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllll...fa..sslw.lllvlrvlqG 96 
                 +++l++ + ++++++ p   a+ l++s +e++++     lg+ ++ +p+G ++d  G+r ++l + +l+++g +l+l   ++  s++  ll+++ +++G
  KHJ34242.1  16 TIALAGGTNYTYSAWGP-QFADKLNYSSTEQNIIGLSANLGMYLLGIPIGIFVDSNGARITVLYAGFLLGIG-YLILyntYSngSGYLpLLCLFSFFTG 112
                 45566666777777777.899***************************************888888888899.5555254446788888********** PP

       MFS_1  97 lgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivslla.fvlfllllpeepperkrkspkeee...... 188
                 +g++a+f+a++ + a  +p+ +rg a+++  a+f+l+a l   +g +++ s++ ++  ++lai ++ + fv f +l   + pe+  ++ ++        
  KHJ34242.1 113 VGGCASFAAAVKVSALNWPE-NRGTATAFPVAAFGLSAFLFSSFGQVIV-SGNTSSFLLLLAIGTFGLnFVGFPFLRIIKVPENILVPAATGNylvkrk 209
                 *******************9.****************************.5555444444444444446887788888888888888777777999999 PP

       MFS_1 189 .....................................................kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplyl 234
                                                                        +   +++  +k+l        ++  + l +++  ++l+++  + 
  KHJ34242.1 210 lynskpdetasnsqlalvnedgsasgsgadetalllldatlvnpiddqessriDYDSTLQISG-IKLLSQVE----FWHLFSLLGIFAGIALMTINNIG 303
                 999999999999999999999999999999999999988888887777776665555555555.77777777....66666666555555666666655 PP

       MFS_1 235 qevlgls...............glllaglllallalvgailallagrlsdr...lgrrrrlllallllllaalglallavtssavllllvlvliGfglg 315
                 + v  l                     ++ +++++++++ +++++g  sd    + +  rl+  +++ +l++++ +l+ +  ++ ll l+++l G+++g
  KHJ34242.1 304 NNVKALWrlwdeskdeefiiqqE----SFQVSFISIASFLGRIISGIGSDYllkTFKASRLWCLVFASALFFVAQILAVTLRDPRLLFLISALTGLAYG 398
                 66666556777778888965542....44444444444444555555555544344456666666666666666666666678899999********** PP

       MFS_1 316 fvfpsllalasdlappeeagtasgl 340
                 fvf+++ +l+s+ ++ +   + +g+
  KHJ34242.1 399 FVFGCFPSLVSEAFGIHSLSQNFGA 423
                 *************976666666665 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.002
       MFS_1 121 raigllsagfslGailg.pllgglla.sslg.......................Wravfyilaivsllafvl 167
                  a+g+ s++ ++Ga+l  p+++g +   ++g                       ++ ++yi  +++l++f +
  KHJ34242.1 410 EAFGIHSLSQNFGAMLLsPIISGNIFnLLYGkiydrqsffgpnghrectkglscYQKAYYITIVACLIGFTV 481
                 68999999******6666999996663555688899999999999999999999999999999999999774 PP

>> Nodulin-like  Nodulin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.6   9.2   2.6e-15   2.4e-11       6     184 ..      12     189 ..       7     204 .. 0.81
   2 ?   -1.2   0.2      0.13   1.2e+03      38      90 ..     329     381 ..     319     445 .. 0.64

  Alignments for each domain:
  == domain 1  score: 43.6 bits;  conditional E-value: 2.6e-15
  Nodulin-like   6 vaaiwiqsiaGanylFsaySsalKsslgisQkqlnlLavakdlGk.alGllsGllaevlplwvvllvgaamglvGYgvvwLvvtesiaklpywllfl 101
                   +aa  i  + G+ny++sa+ ++    l++s ++ n++++  +lG   lG+  G+ ++     + +l + +   +GY++++ + ++    lp+   +l
    KHJ34242.1  12 IAATTIALAGGTNYTYSAWGPQFADKLNYSSTEQNIIGLSANLGMyLLGIPIGIFVDSNGARITVLYAGFLLGIGYLILYNTYSNGSGYLPLL--CL 106
                   78999999************************************8358******99998887766666666668********99998877765..55 PP

  Nodulin-like 102 lillaanseawlnTaslvtcirnFpesrgvvvgllkgyaGlsaaiytqlyeailgsdaksllllvalvplvvslvvlylvrev 184
                   + +  + + +    a+   +  n+pe+rg + +  ++  Glsa ++++  + i + +++s+lll+a++ + + +v   ++r +
    KHJ34242.1 107 FSFFTGVGGCASFAAAVKVSALNWPENRGTATAFPVAAFGLSAFLFSSFGQVIVSGNTSSFLLLLAIGTFGLNFVGFPFLRII 189
                   55555555554444444445569******************************************998765555555444444 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.13
  Nodulin-like  38 qlnlLavakdlGkal.GllsGllaevlplwvvllvgaamglvGYgvvwLvvtes 90 
                   q++++++a+ lG  + G+ s +l++++  + +     a++l+ +  + L+vt +
    KHJ34242.1 329 QVSFISIASFLGRIIsGIGSDYLLKTFKASRLWCLVFASALF-FVAQILAVTLR 381
                   677777777777765477777777666554433332222222.45555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (509 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       700  (0.0390429); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 3557.51
//
Query:       KHJ34243.1  [L=902]
Description: putative gpi inositol-deacylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.7e-90  301.7   0.0    5.9e-90  301.0   0.0    1.3  1  PGAP1          PGAP1-like protein
    3.1e-05   24.7   0.1    4.8e-05   24.1   0.1    1.3  1  Abhydrolase_6  Alpha/beta hydrolase family
     0.0043   16.3   0.0     0.0083   15.4   0.0    1.4  1  Hydrolase_4    Serine aminopeptidase, S33
     0.0044   16.7   0.0      0.014   15.0   0.0    1.9  2  Abhydrolase_1  alpha/beta hydrolase fold
     0.0089   15.9   0.0      0.021   14.7   0.0    1.6  1  Palm_thioest   Palmitoyl protein thioesterase
  ------ inclusion threshold ------
      0.024   14.1   0.0      0.059   12.9   0.0    1.6  1  DUF676         Putative serine esterase (DUF676)
       0.14   11.3   0.0       0.28   10.3   0.0    1.4  1  LCAT           Lecithin:cholesterol acyltransferase
       0.47   10.5   4.3       0.59   10.2   1.1    2.3  2  Sec61_beta     Sec61beta family


Domain annotation for each model (and alignments):
>> PGAP1  PGAP1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  301.0   0.0   2.7e-93   5.9e-90       2     230 ..     199     442 ..     198     443 .. 0.95

  Alignments for each domain:
  == domain 1  score: 301.0 bits;  conditional E-value: 2.7e-93
       PGAP1   2 lsGipVlFvpGnagsykqvrslAseaaeayqe...lrkllknqnkkeldfftvdfneelsaldGrtlldqaeylndaIkyIlsly........ssseke 89 
                 ++G+pVlF+pGnagsykqvr +A+e a+ y e    ++++k+   ++ldfftvdfne+++a++Grtlldqaeyln+aI  Ilsly        +   ++
  KHJ34243.1 199 VKGVPVLFIPGNAGSYKQVRPIAAEGASFYHEvlrFDSSAKSAGVRQLDFFTVDFNEDITAFHGRTLLDQAEYLNEAISFILSLYhdphrserDLDLPD 297
                 79************************999888877667788888899*****************************************99877777899 PP

       PGAP1  90 ptsviliGHSmGGivaraaltlknyikqsvntiltlasPhalpplsfdkdilklyervnefwkkeleekek....lenvllvsitggirdsmvpaeyss 184
                 ptsvi++GHSmGGivar++l+++ny+ +s+nti+t+++Pha pp+sfd +i+  y+r+n++w+ ++++k +    l +v+l+si+gg  d++vp++y+s
  KHJ34243.1 298 PTSVIILGHSMGGIVARTMLIMPNYQTNSINTIITMSAPHARPPVSFDSEIVTTYQRINKYWRDAYSQKWAnnnpLWHVTLISIAGGGLDTVVPSDYAS 396
                 *****************************************************************9998778899************************ PP

       PGAP1 185 leelvpstnglsvattsipkvwlsidhlaivwckqlrrvvaralle 230
                 l++lvp t+g++v+t+++p+vw+++dh+ai+wc+q+r  v r l++
  KHJ34243.1 397 LDSLVPDTHGFTVFTSTVPNVWTGMDHQAILWCDQFRNIVVRSLYD 442
                 ****************************************999876 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.1   2.2e-08   4.8e-05       1     173 [.     204     425 ..     204     459 .. 0.56

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 2.2e-08
                    EEEE--GC.....GC.HHHHHHHHCCT.CEEEEE--TTS..T..........S-GGCS--HHH.........CHHHHHHHCCTT............ CS
  Abhydrolase_6   1 vlllHGagssassWl.vapLaallaag.vhvlapDlpGh..G..........rsdpppldled.........ladlaalldelaa........... 62 
                    vl+++G     +s+  v+p+aa +a+  ++vl +D      G          +        ++         l+d+a++l+e ++           
     KHJ34243.1 204 VLFIPGNA---GSYKqVRPIAAEGASFyHEVLRFDSSAKsaGvrqldfftvdF--------NEditafhgrtLLDQAEYLNEAISfilslyhdphr 288
                    799**955...348458899888888876778899952233433333322220........22222122233466666666666677777778888 PP

                    .........TTSEEEEEETCHHHHHHHHHHCC...........EEEEES-..----TTT.......S----TTHHHHHH...TT-C..CCCHCCH. CS
  Abhydrolase_6  63 ........gggpvvlvGHSlGGalalaaapla.........lvvgvlldppptalpagl.......laaalelllalla...llrl..lawlsre. 128
                            ++  v+++GHS+GG++a      +         ++  + +++p   +p ++        +++ ++++ +++   +     + w+++  
     KHJ34243.1 289 serdldlpDPTSVIILGHSMGGIVART---MLimpnyqtnsINTIITMSAPHARPPVSFdseivttYQRINKYWRDAYSqkwA--NnnPLWHVTLi 379
                    8888998899999*************9...55565898775433488888665555555334434433333333322223322..13356664322 PP

                    .S-HSCCCCHHHCCCCHCHCCCGHHHHCCHHCHTTCCHHTT-TTGC CS
  Abhydrolase_6 129 .plprlfladedadaawrarlarlaallaglgllpaaawadlpvpl 173
                     +++ ++   ++ d+a  + l +  + ++ +    +  w+++  + 
     KHJ34243.1 380 sIAGGGLDTVVPSDYASLDSLVPDTHGFTVFTSTVPNVWTGMDHQA 425
                    2222222222221233333333333333333344455666666655 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   3.7e-06    0.0083      77     115 ..     300     342 ..     281     378 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 3.7e-06
  Hydrolase_4  77 plfllGhSmGGliallyl..lrypd.kvagli.lsaPalkika 115
                   +++lGhSmGG++a ++l   +y+  +++ +i +saP  +++ 
   KHJ34243.1 300 SVIILGHSMGGIVARTMLimPNYQTnSINTIItMSAPHARPPV 342
                  689************9996644444467755514555555443 PP

>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       3.6   8.1e+03       2      15 ..     203     216 ..     203     260 .. 0.72
   2 !   15.0   0.0   6.3e-06     0.014      73     110 ..     299     341 ..     290     372 .. 0.80

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 3.6
                    EEEEE-STTTCGGG CS
  Abhydrolase_1   2 vlvilhGlpgssdv 15 
                    ++++++G +gs   
     KHJ34243.1 203 PVLFIPGNAGSYKQ 216
                    79999999997654 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 6.3e-06
                    SSEEEEEETHHHHHHHHHHHHH...GGGEEEEEEESE..CSSC CS
  Abhydrolase_1  73 dkltlvGhSmGGmialayaaey...perVkalvllga..idpa 110
                     +++++GhSmGG +a++++ +     ++++ +++++a    p+
     KHJ34243.1 299 TSVIILGHSMGGIVARTMLIMPnyqTNSINTIITMSAphARPP 341
                    6789*****************999*************543333 PP

>> Palm_thioest  Palmitoyl protein thioesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   9.3e-06     0.021      65     143 ..     298     363 ..     204     377 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 9.3e-06
  Palm_thioest  65 angfhaiGfSQGglflRaliercddkkn.vrnlislggpqaGvfglllckvaekllasgavysklvqkslvqaqywrdpe 143
                   ++ ++++G+S Gg+++R ++ + + ++n ++++i++++p+a              ++     s++v++   +++ywrd +
    KHJ34243.1 298 PTSVIILGHSMGGIVARTMLIMPNYQTNsINTIITMSAPHARPP-----------VSFD---SEIVTTYQRINKYWRDAY 363
                   57899************998887766667***********8221...........1111...333333333444444444 PP

>> DUF676  Putative serine esterase (DUF676)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.6e-05     0.059      83     126 ..     303     337 ..     288     363 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.6e-05
      DUF676  83 fvghSlGgliaraaiaklkekemtlkeaikglepvtfitlasPh 126
                 ++ghS+Gg++ar ++  ++ +++          + t it++ Ph
  KHJ34243.1 303 ILGHSMGGIVARTMLIMPNYQTN---------SINTIITMSAPH 337
                 78**************7775544.........466999*****9 PP

>> LCAT  Lecithin:cholesterol acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00013      0.28     122     162 ..     300     337 ..     291     343 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00013
        LCAT 122 kvvliaHSmGnllvlyflkwveaeaWvdqhikafislgapl 162
                  v++++HSmG+ + + +l   + +    + i+ +i ++ap 
  KHJ34243.1 300 SVIILGHSMGGIVARTMLIMPNYQT---NSINTIITMSAPH 337
                 699********99998888755555...99*********96 PP

>> Sec61_beta  Sec61beta family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.1   0.00026      0.59      18      40 ..     125     147 ..     123     148 .. 0.93
   2 ?    0.4   0.1       0.3   6.8e+02      19      34 ..     297     312 ..     297     313 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00026
                 B-THHHHHHHHHHHHHHHHHTSS CS
  Sec61_beta  18 idPkvVlvlsvafiasVilLhil 40 
                 i+P++ +  s+++++++++Lh +
  KHJ34243.1 125 ISPLTLITTSAGLMILIFILHSF 147
                 9********************66 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.3
                 -THHHHHHHHHHHHHH CS
  Sec61_beta  19 dPkvVlvlsvafiasV 34 
                 dP+ V++l+  ++++V
  KHJ34243.1 297 DPTSVIILGHSMGGIV 312
                 8*******99999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (902 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       402  (0.0224218); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.69u 0.27s 00:00:00.96 Elapsed: 00:00:00.44
# Mc/sec: 6108.72
//
Query:       KHJ34244.1  [L=1097]
Description: putative atp-dependent protease la protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-65  219.5   0.0    5.8e-65  218.7   0.0    1.5  1  Lon_C           Lon protease (S16) C-terminal proteolytic dom
    3.1e-38  131.7   0.1    7.4e-38  130.5   0.1    1.7  1  LON_substr_bdg  ATP-dependent protease La (LON) substrate-bin
    4.7e-22   78.8   0.0    1.2e-21   77.5   0.0    1.8  1  AAA             ATPase family associated with various cellula
    1.3e-06   28.3   0.0    3.4e-06   26.9   0.0    1.7  1  ChlI            Subunit ChlI of Mg-chelatase
    6.1e-06   26.3   0.0    1.4e-05   25.2   0.0    1.7  1  AAA_5           AAA domain (dynein-related subfamily)
      3e-05   23.8   0.1    0.00057   19.7   0.0    2.8  3  RuvB_N          Holliday junction DNA helicase RuvB P-loop do
    3.5e-05   24.1   0.0     0.0012   19.1   0.0    2.7  1  AAA_22          AAA domain
    4.3e-05   23.7   0.0    0.00012   22.2   0.0    1.7  1  AAA_2           AAA domain (Cdc48 subfamily)
    6.8e-05   21.9   0.0    0.00013   21.1   0.0    1.3  1  AAA_PrkA        PrkA AAA domain
    0.00037   20.9   0.2     0.0035   17.8   0.0    2.2  2  AAA_16          AAA ATPase domain
    0.00083   19.9   0.7      0.083   13.4   0.0    3.6  3  AAA_18          AAA domain
     0.0044   17.1   0.0      0.068   13.2   0.0    2.7  2  AAA_14          AAA domain
  ------ inclusion threshold ------
      0.014   15.1   0.0      0.033   13.9   0.0    1.5  1  AAA_30          AAA domain
      0.024   14.4   0.0      0.065   13.0   0.0    1.7  1  IstB_IS21       IstB-like ATP binding protein
      0.025   14.6   4.9        0.1   12.7   0.2    2.9  2  ClpB_D2-small   C-terminal, D2-small domain, of ClpB protein
      0.025   15.0   0.0       0.22   11.9   0.0    2.6  2  RNA_helicase    RNA helicase
      0.036   14.0   0.0       0.15   12.0   0.0    2.0  1  RsgA_GTPase     RsgA GTPase
      0.038   13.9   0.1        1.9    8.3   0.0    2.8  3  NTPase_1        NTPase
      0.059   13.3   0.0       0.21   11.5   0.0    1.9  1  F-box-like_2    F-box-like domain
      0.063   13.5   0.3       0.24   11.6   0.1    2.1  2  DUF4276         Domain of unknown function (DUF4276)
       0.11   12.0   0.0       0.26   10.8   0.0    1.6  1  AAA_7           P-loop containing dynein motor region
       0.63   10.6   4.7       0.88   10.1   0.1    3.1  3  ABC_tran        ABC transporter


Domain annotation for each model (and alignments):
>> Lon_C  Lon protease (S16) C-terminal proteolytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.7   0.0   7.1e-68   5.8e-65       2     203 ..     864    1070 ..     863    1072 .. 0.95

  Alignments for each domain:
  == domain 1  score: 218.7 bits;  conditional E-value: 7.1e-68
                  E-TTTTHHHH-S-SS--SSSSS--BSSEEEEEEEETTEEEEEEEEEE.....EESS-S-EEEEES--HHHHHHHHHHHHHHTSS-GGGSS-SS-TTT CS
       Lon_C    2 vtakeleellGkkrfrseeaekedqvGvvtGlawtevGGdlltieav.....llpgkgklkltGklgdvmkesaqaalsyvrsraeelgidkevfek 93  
                  +++++l++++G ++f+s++       Gv++Glawt++GG  l++e+      + + +  +++tG+++ vmkesa++a+s+ +s + +   d+ +f+k
  KHJ34244.1  864 IDKENLKDYVGPPVFTSDRLYDVAPAGVAMGLAWTQMGGAALYVESIlesalSADSRPAFEITGNMKSVMKESATIAYSFSKSVMVKKFPDNVFFDK 960 
                  899*****************************************975111114567889************************************** PP

                  -EEEEEE-S-B-GGGGGGGHHHHHHHHHHHHTS--B-TTBEE--EE-TT-BEE--S-HHHHHHHHHHTT-SBEEEEGGGGGGTTTS-HHHHTS-B-- CS
       Lon_C   94 kdihihvPeGavPkdGPsaGvtlatalvslltgkkvrkdvamtGeitLrGrvlpiGGlkekllaakragikkvilPkenekdlediPeevreeleii 190 
                  ++ih+h PeGavPkdGPsaG+t+at+l+sl  +k+ + ++amtGe+t++G+vl iGGl+ek++aa+rag k +i+P++n +d  ++P++++e++e +
  KHJ34244.1  961 AKIHLHCPEGAVPKDGPSAGITMATSLLSLALDKPLDPNIAMTGELTVTGKVLRIGGLREKTVAARRAGSKMIIFPNDNMSDWIELPDNIKEGIEGH 1057
                  ************************************************************************************************* PP

                  EESBHHHHHHHHB CS
       Lon_C  191 lveevdevlkaal 203 
                  +v+++++v++ ++
  KHJ34244.1 1058 PVKWYSDVFDLVF 1070
                  ********98776 PP

>> LON_substr_bdg  ATP-dependent protease La (LON) substrate-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.5   0.1     9e-41   7.4e-38       2     207 ..     169     443 ..     168     444 .. 0.90

  Alignments for each domain:
  == domain 1  score: 130.5 bits;  conditional E-value: 9e-41
  LON_substr_bdg   2 lpllpldnkvlfPgitlpltvsrpksiaaierlldkdkpyigvflv.kesqkdaide.esiselysvGtvarIvqilrld..dgrikvvlegleR 92 
                     + ++pl++++lfPg++ p+t++++ +iaai++ll++++pyig f+  +e++++  d+ e+i+++y+ G +a+I++  +++   g +  + ++++R
      KHJ34244.1 169 VLAIPLSKRPLFPGFYKPVTIRNKHVIAAIQDLLKRGQPYIGAFVFkDENSEG--DIiENINDVYETGIFAQITGAYTNNgeGGGVTAIFYPHRR 261
                     5789******************************************3344444..45679***************9977744588********** PP

  LON_substr_bdg  93 vkikkl.eke....................................................................keegylvaeveiiedds 118
                     vki++l   +                                                                    +++++  a++e++ +  
      KHJ34244.1 262 VKITSLiT-PdsestsaelqtgentasdlaipdvipskqqkdelasekkgnivasfeesainqkttekppsyelssflEKHPVSIAKIENLVE-- 353
                     ******54.35*************************************************************999999999999******955.. PP

  LON_substr_bdg 119 epedsdslqkelkalvqeiiekikk.....slarellkllleielllkyedlenpyrLadlvaailpfsneekqelLeeldvedRlkkvlelLk 207
                     ep+ds+s  + ++al++ei++ +k+     sl+r +++ ++   ++ + ++l +p++Lad++aa+ +++  ++q++Le+l+ve+Rlkk+l  +k
      KHJ34244.1 354 EPHDSKS--SMIRALTNEIVNVFKDvaslnSLFRDQISTFS--MSHSSGNVLSEPAKLADFAAAVSSGDVADLQDILETLNVEERLKKALVVVK 443
                     5666666..6***************887666*********8..777778889*************************************98766 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.5   0.0   1.5e-24   1.2e-21       1     127 [.     595     732 ..     595     737 .. 0.92

  Alignments for each domain:
  == domain 1  score: 77.5 bits;  conditional E-value: 1.5e-24
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSS.........STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellsk.........yvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLl 90 
                 ++++GppG+GKT++ k++a+ l+++++++s+  l +          yvg+ + +i + +k++++++    ++iDEid+l++         + + +++Ll
  KHJ34244.1 595 LCFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLADVaeikghrrtYVGALPGRIVQALKKCQTEN--PLILIDEIDKLGRGH-------QGDPASALL 684
                 589*******************988888888888755778888888*****************998..9**********8888.......999****** PP

                 HHHHHTTTS............SSTEEEEEEESSGGGSTHHHHSTTSSEE CS
         AAA  91 teldgvkkk............eskvivigatnrpdkldpallrgRfdrk 127
                 + ld ++++             skv++++++n  d+++++ll +R++++
  KHJ34244.1 685 ELLDPEQNNafldhyldvpvdLSKVLFVCTANMTDSIPRPLL-DRMEMI 732
                 *********************999******************.***976 PP

>> ChlI  Subunit ChlI of Mg-chelatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   4.2e-09   3.4e-06       8     121 .]     919    1039 ..     912    1039 .. 0.89

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 4.2e-09
        ChlI    8 glpkftivGlpdtavkeskervrsalkn.......sgfefpakkitvnLaPadlkkeGsafDLpiAigilaaleqieaeeetlflGeLsldGslrpv 97  
                    p+f+i+G  ++ +kes     s  k+        ++ f++ ki +      ++k+G++  +++A ++l+ + +++ + ++ + GeL  +G++ ++
  KHJ34244.1  919 SRPAFEITGNMKSVMKESATIAYSFSKSvmvkkfpDNVFFDKAKIHLHCPEGAVPKDGPSAGITMATSLLSLALDKPLDPNIAMTGELTVTGKVLRI 1015
                  56889999999999999998887766655555566677788999999999999******************************************** PP

        ChlI   98 kgvlpialaakkegikkvivpken 121 
                   g+ + ++aa+++g k +i p++n
  KHJ34244.1 1016 GGLREKTVAARRAGSKMIIFPNDN 1039
                  *********************987 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   1.7e-08   1.4e-05       2      93 ..     595     691 ..     594     729 .. 0.71

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 1.7e-08
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------....G-SEEEEESGGG--H....HHHHHHHHHHHSS CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar....egeilvlDEveraes....evlnsLlslleer 92 
                 ++ vGppG+gK+++ +++a+alnr++           +++kg+r++        ++ +v+a +    e  ++++DE++++ +    + +++Ll ll+ +
  KHJ34244.1 595 LCFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLADVAEIKGHRRTYV---GALPGRIVQALKkcqtENPLILIDEIDKLGRghqgDPASALLELLDPE 690
                 799******************************************743...3345666666666668999********986511114556677777665 PP

                 E CS
       AAA_5  93 r 93 
                 +
  KHJ34244.1 691 Q 691
                 5 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.65   5.3e+02      60     108 ..     392     439 ..     378     458 .. 0.81
   2 !   19.7   0.0     7e-07   0.00057       7      63 ..     565     622 ..     561     677 .. 0.87
   3 ?   -3.3   0.0       8.2   6.7e+03     127     155 ..     703     731 ..     698     733 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.65
      RuvB_N  60 klkitsgPvlekagdlaalltnleekdvlfideihrlsraveevlysam 108
                 ++ ++sg vl++++ la + + ++++dv  + +i     +vee l +a+
  KHJ34244.1 392 SMSHSSGNVLSEPAKLADFAAAVSSGDVADLQDILET-LNVEERLKKAL 439
                 57789***********************999888653.45788777776 PP

  == domain 2  score: 19.7 bits;  conditional E-value: 7e-07
      RuvB_N   7 eeyigqekvkeklkifieaakkreealdhvl.lyGpPGlGkttlakiiakelgvklki 63 
                 e++ g ++vk+++  fi+  k r++    +l ++GpPG+Gkt++ k ia+ l+ +   
  KHJ34244.1 565 EDHYGLKDVKDRILEFIAVGKLRGTVEGKILcFVGPPGVGKTSIGKSIARALNRQYYR 622
                 578899********************99998578*****************9987654 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 8.2
      RuvB_N 127 kldlpkftlvgattragllssPlrdrfgi 155
                  +dl+k  +v ++  +  +  Pl dr+ +
  KHJ34244.1 703 PVDLSKVLFVCTANMTDSIPRPLLDRMEM 731
                 678999999999999999*******9977 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   1.4e-06    0.0012       5     107 ..     592     682 ..     589     697 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1.4e-06
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelkaerlsseellealeqalrarav.ielliiDEaqh 102
                  +il+ +G++G+GKT   + +++ l         +++++++ + ++        +++++ g+++ +      +l  ++ qal+++++  +l++iDE+++
  KHJ34244.1 592 GKILCFVGPPGVGKTSIGKSIARAL---------NRQYYRFSVGGLA-------DVAEIKGHRRTY----VGALPGRIVQALKKCQTeNPLILIDEIDK 670
                 68999********************.........8886666665555.......667777765555....778889*********************** PP

      AAA_22 103 lr...s....ee 107
                 l    +     +
  KHJ34244.1 671 LGrghQgdpaSA 682
                 *65542444333 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   1.5e-07   0.00012       7     134 ..     596     722 ..     591     746 .. 0.75

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 1.5e-07
                 EEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG---.----THHHHHHHHHTTT-HHHHTTS......EEEEETGGG-------------HHHHHH CS
       AAA_2   7 lllgptgvGktelakalaellfvkkekkliradaselle.eeevehlvsrligappgyvgaeegG......ivllDEidKihpkessgadvSregVqrd 98 
                  ++gp gvGkt + k++a+ l+ ++  ++ +    +++e +   +++v  l     g + ++ +        +l+DEidK  +         + +   +
  KHJ34244.1 596 CFVGPPGVGKTSIGKSIARALN-RQYYRFSVGGLADVAEiKGHRRTYVGALP----GRIVQALKKcqtenpLILIDEIDKLGR-------GHQGDPASA 682
                 599*******************.77778877777777663334444454444....433322222344456************.......223467889 PP

                 HHHHHH--EE-...----.--EE-TT-EEEEEE--TTHHH CS
       AAA_2  99 LLqileggtlt...dkqg.rkvdtknilfImtgafgsski 134
                 LL +l+  + +   d++   +vd +++lf++t ++  s +
  KHJ34244.1 683 LLELLDPEQNNaflDHYLdVPVDLSKVLFVCTANMTDSIP 722
                 99999976666666555449**************987665 PP

>> AAA_PrkA  PrkA AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.0   1.5e-07   0.00013      57     114 ..     561     618 ..     549     630 .. 0.91

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 1.5e-07
    AAA_PrkA  57 pafeedffGleetiekiveyfraaaqrleerkqilyllGPvggGksslverlkkllea 114
                 ++++ed +Gl+++ ++i+e++     r+ ++ +il ++GP g Gk+s+ +++ ++l+ 
  KHJ34244.1 561 TVLDEDHYGLKDVKDRILEFIAVGKLRGTVEGKILCFVGPPGVGKTSIGKSIARALNR 618
                 57899***********************************************999976 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   4.2e-06    0.0035      24      63 ..     592     631 ..     574     658 .. 0.70
   2 ?    0.6   0.0      0.81   6.6e+02     118     159 ..     644     687 ..     627     703 .. 0.68

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 4.2e-06
      AAA_16  24 pelvllsGesGvGKsslvrellralekdggiflrgkcdql 63 
                 + ++ ++G++GvGK+s+ ++++ral++++  f  g   + 
  KHJ34244.1 592 GKILCFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLADV 631
                 38999***********************777744444333 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.81
      AAA_16 118 rllellkrllallsrderplvlvlDdlqwade....aslqllaaLl 159
                 +l   + ++l+++++ e   ++++D+++++      +++++l +Ll
  KHJ34244.1 644 ALPGRIVQALKKCQT-EN-PLILIDEIDKLGRghqgDPASALLELL 687
                 566778888899999.77.68899****877644444444433444 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.2         1   8.4e+02      17      89 ..     434     516 ..     428     525 .. 0.68
   2 !   13.4   0.0    0.0001     0.083       2      25 ..     596     622 ..     595     670 .. 0.82
   3 ?    1.2   0.0      0.61     5e+02      70     103 ..     940     969 ..     812     972 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 1
      AAA_18  17 eLskrlgfgvnlrdvakenglllevdpealdeskrldedkldklldaleenss...............aleegknlvidghlaelese 89 
                 +L+k l   v++++ + +  l    +++   e+ ++d+++   l+++++++++                +e+g+ l +  ++ + ++e
  KHJ34244.1 434 RLKKAL---VVVKKELMNAKLQSKITKD--VEKAIADRQREYWLMEQMKGIRRelgiesdgkdklvtkFREKGEKLAMPEVVKKVFDE 516
                 555553...7777788888888888888..7788888888888888888888888866666666666666666666665555555555 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 0.0001
      AAA_18   2 lltGtpGvGKttlakeLskrlgf...g 25 
                 +  G+pGvGKt+++k +++ l+     
  KHJ34244.1 596 CFVGPPGVGKTSIGKSIARALNRqyyR 622
                 678***************998555552 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.61
      AAA_18  70 aleegknlvidghlaeleseaakdikkvvLtasp 103
                 a+   k++ +  ++ + ++++ak    ++L++++
  KHJ34244.1 940 AYSFSKSVMVKKFPDNVFFDKAK----IHLHCPE 969
                 45556788899999999999888....9999997 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.92   7.5e+02      48     107 ..     103     159 ..      82     174 .. 0.76
   2 !   13.2   0.0   8.3e-05     0.068       2      76 ..     592     671 ..     591     720 .. 0.70

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.92
      AAA_14  48 dpekllelilek.lkeekktylflDEiqevpewekalkslvdegknldvivtGSnskllsk 107
                 +p  +++ +++  +++++ t  + DE  e+++ ++ + s v+eg  ++ +  GS  k l+k
  KHJ34244.1 103 NP--NEDKLRNTsISSPGSTSTVVDEKNESSNSSTNVDSGVNEG--GKKVRKGSTEKSLQK 159
                 33..445566655555699999********************99..788999999998876 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 8.3e-05
      AAA_14   2 rkilvitGaRrvGKTtllkqlikellvkkesilyinldderd....kkladpe.....kllelileklke..ekktylflDEiqev 76 
                 +kil+ +G+  vGKT + k +++ l    +++  +++    d    k +   +      l+  i + lk+   ++ ++++DEi ++
  KHJ34244.1 592 GKILCFVGPPGVGKTSIGKSIARALN---RQYYRFSVGGLADvaeiKGH---RrtyvgALPGRIVQALKKcqTENPLILIDEIDKL 671
                 68999*****************9988...88888887776664333222...122456444444443322335899*******987 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0     4e-05     0.033      19      98 ..     593     669 ..     586     689 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4e-05
      AAA_30  19 rvavltGpAGtGKttalkalreaweaa..ggrviglAptgkaAkvLaeelgieastiakllkrlkgrarlepgtllivDEag 98 
                 ++ + +Gp+G GKt + k++++a++++   ++v glA  ++     ++ +g+   +i + lk+ +      ++ l+++DE+ 
  KHJ34244.1 593 KILCFVGPPGVGKTSIGKSIARALNRQyyRFSVGGLADVAEIKGHRRTYVGALPGRIVQALKKCQT-----ENPLILIDEID 669
                 47889***************9999998445888999998888887777777644444444433332.....35777788765 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0     8e-05     0.065      46     119 ..     591     670 ..     555     693 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 8e-05
   IstB_IS21  46 kkenivllGpsGvGKshlaialgveavraglsvlfvrvedLveelkrarrd......gklaralkrllkv.dllilDdlgl 119
                 + + ++++Gp+GvGK+ +  +++++  r+ ++ +   ++d+ +e+k +rr       g++ +alk+++    l+++D++  
  KHJ34244.1 591 EGKILCFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLADV-AEIKGHRRTyvgalpGRIVQALKKCQTEnPLILIDEIDK 670
                 45568999*****************9999998887777775.445555543232222566666666554425666777655 PP

>> ClpB_D2-small  C-terminal, D2-small domain, of ClpB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   1.0       0.2   1.7e+02      10      41 ..     435     466 ..     420     470 .. 0.86
   2 ?   12.7   0.2   0.00013       0.1       7      58 ..     743     794 ..     739     805 .. 0.91

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.2
                    HHHHHHHHHHHSCTTTEEEEEHHHHHHHHHHH CS
  ClpB_D2-small  10 vdlalkklekrlkergvelevtdealdalaek 41 
                    +++al  ++k l++ +++ ++t+++ +a+a++
     KHJ34244.1 435 LKKALVVVKKELMNAKLQSKITKDVEKAIADR 466
                    5679999***********************97 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00013
                    HHHHHHHHHHHHHHSCT.TTEEEEEHHHHHHHHHHHTSBTTTBTCCHHHHHHH CS
  ClpB_D2-small   7 kkIvdlalkklekrlke.rgvelevtdealdalaekgydpeyGARpLrriiqr 58 
                      I++  l   +k l+  ++v+++++ +a++ l++  y +e G R+L++ i++
     KHJ34244.1 743 IAIAERYLGPAAKELAGlKNVDVNLSRDAIEELIKS-YCRESGVRNLKKHIEK 794
                    579999999999***999****************85.9*************97 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       5.9   4.8e+03       8      27 ..     356     375 ..     352     404 .. 0.72
   2 ?   11.9   0.0   0.00027      0.22       1      26 [.     595     620 ..     595     680 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 5.9
  RNA_helicase   8 geGKStlakeLakallkklk 27 
                   +  KS++++ L++++ + +k
    KHJ34244.1 356 HDSKSSMIRALTNEIVNVFK 375
                   56688888888887776553 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00027
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   ++++Gp+g+GK+++ k++a+al +++
    KHJ34244.1 595 LCFVGPPGVGKTSIGKSIARALNRQY 620
                   589*******************9887 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00018      0.15      90     123 ..     583     616 ..     563     625 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00018
                  HHHHHHHCTTSEEEEECSTTSSHHHHHHHHCTT- CS
  RsgA_GTPase  90 leelkellkdktsvlvGqSGvGKStLinallpel 123
                  + +l+  +++k+ ++vG+ GvGK+++ ++++  l
   KHJ34244.1 583 VGKLRGTVEGKILCFVGPPGVGKTSIGKSIARAL 616
                  66899999*****************988887655 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       7.6   6.2e+03     113     144 ..     193     227 ..     190     236 .. 0.65
   2 ?    8.3   0.0    0.0024       1.9       5      33 ..     598     628 ..     595     641 .. 0.77
   3 ?    2.2   0.0      0.18   1.5e+02      84     107 ..     648     671 ..     635     692 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 7.6
                 HHHHHHHHHHTTTSEEEEE--SS-...-SHHHHHH CS
    NTPase_1 113 kfkeaveevLksekpvlavihrrk...dlalveei 144
                 +++ a++++Lk+++p ++ +  ++   + +++e+i
  KHJ34244.1 193 HVIAAIQDLLKRGQPYIGAFVFKDensEGDIIENI 227
                 67889999999999999765444322444455554 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0024
                 E--TTSSHHHHHHHHHHHH.....GGGEEEE CS
    NTPase_1   5 TGppGvGKtTlvkkvlellkss..gvkvgGf 33 
                  GppGvGKt + k ++++l+++   ++vgG+
  KHJ34244.1 598 VGPPGVGKTSIGKSIARALNRQyyRFSVGGL 628
                 59*****************988334456665 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.18
                 HHHHHHHHHHHHH-EEEE---STT CS
    NTPase_1  84 lalealrkalseadviviDEiGkm 107
                  +++al+k ++e+ +i+iDEi k+
  KHJ34244.1 648 RIVQALKKCQTENPLILIDEIDKL 671
                 57899999999999*******876 PP

>> F-box-like_2  F-box-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00026      0.21      27      99 ..     770     843 ..     764     849 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00026
  F-box-like_2  27 dellelifkgCkdpayeplspslakayrrkrkhieylLaqpk.qcralkklltptskplWldelrvmdtaedcr 99 
                   d + eli ++C++    +l++ + k yr+   +i+++L+++  + + l ++   +sk+  +d+  v + +e+++
    KHJ34244.1 770 DAIEELIKSYCRESGVRNLKKHIEKIYRKSALKIVQDLGETGsVEKNLTDEENFASKESSKDISDVNESSENIE 843
                   56889*********************************987514577887777777777777777766666665 PP

>> DUF4276  Domain of unknown function (DUF4276)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       6.2     5e+03     121     146 ..      68      93 ..      58     100 .. 0.82
   2 ?   11.6   0.1    0.0003      0.24      67     146 ..     439     529 ..     331     547 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 6.2
     DUF4276 121 kefsnPenindgpktapskrleeafp 146
                 k+ ++P++++++p++++ + l++ ++
  KHJ34244.1  68 KKKDTPKTLKGSPDEKIDDDLKDKTE 93 
                 56779*****99*****999999877 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.0003
     DUF4276  67 veeleral.kedidskgderfipyiqlhefEawlladpealk........ekseslsklkkirkefsnPenindgpktapskr..leeafp 146
                 +  ++++l + + +sk ++++   i+ +  E wl+ +++ ++         k++ + k+++  ++++ Pe ++ + ++++sk   le a +
  KHJ34244.1 439 LVVVKKELmNAKLQSKITKDVEKAIADRQREYWLMEQMKGIRrelgiesdGKDKLVTKFREKGEKLAMPEVVKKVFDEELSKLahLEPAAS 529
                 33444443033344449********************************99999*******************99**99999655666555 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00032      0.26      33      63 ..     592     622 ..     588     629 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00032
       AAA_7  33 kkpvllvGptGtGKtviikdllkkldkekyl 63 
                 +k +++vGp G+GKt+i k++ ++l+++ y 
  KHJ34244.1 592 GKILCFVGPPGVGKTSIGKSIARALNRQYYR 622
                 56688********************976664 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.1       1.4   1.2e+03      45     101 ..     421     492 ..     349     506 .. 0.69
   2 ?   10.1   0.1    0.0011      0.88      10      36 ..     591     617 ..     588     640 .. 0.91
   3 ?   -0.9   0.1       2.7   2.2e+03      47      97 ..     790     844 ..     775     860 .. 0.59

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 1.4
                 TTCEGGG..B-HHHCCHCEEEE-SS...--S-TTSB.HHHH...........HHHTCHHHHHHHSTTGGTTCBG CS
                 xxxxxxx..xxxxxxxxxxxxxxxx...xxxxxxxx.xxxx...........xxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  45 dgkdlke..qeleslrkeigvlpqe...pqlfpelt.vren...........esdeeiekalsklglkelkdtv 101
                 d +d+ e  + +e+l+k + v+++e   ++l++++t                +  e+++ ++++lg++ + +++
  KHJ34244.1 421 DLQDILEtlNVEERLKKALVVVKKElmnAKLQSKITkD--VekaiadrqreyWLMEQMKGIRRELGIESDGKDK 492
                 33334335566677777777777776555566665531..1346766666666666688888888877765555 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.0011
                 TTSEEEEEESTTSSHHHHHHHHTTSS- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  10 egekvaivGenGaGKStLlkllagllk 36 
                 eg+++ +vG+ G GK+++ k +a+ l+
  KHJ34244.1 591 EGKILCFVGPPGVGKTSIGKSIARALN 617
                 799*******************99876 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 2.7
                 CEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH....HHHTCHHHHHHHSTTGGT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxx RF
    ABC_tran  47 kdlkeqeleslrkeigvlpqepqlfpeltvren....esdeeiekalsklglkel 97 
                 k+++++ ++s+ k ++ l ++ ++ ++lt +en    es+++i+++ ++ +++e+
  KHJ34244.1 790 KHIEKIYRKSALKIVQDLGETGSVEKNLTDEENfaskESSKDISDVNESSENIEK 844
                 3344444444444444444446666666666668877666666666666555553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1097 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       816  (0.0455129); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 0.84u 0.28s 00:00:01.12 Elapsed: 00:00:00.44
# Mc/sec: 7492.92
//
Query:       KHJ34245.1  [L=957]
Description: putative chromosome transmission fidelity protein 18 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.3e-11   42.4   0.0    2.1e-10   41.1   0.0    1.7  1  AAA           ATPase family associated with various cellular 
    9.8e-07   29.1   0.0    3.5e-06   27.3   0.0    1.9  1  AAA_22        AAA domain
    1.1e-05   25.5   3.2    1.2e-05   25.3   0.5    2.4  2  Rad17         Rad17 P-loop domain
    1.8e-05   24.5   0.0    3.4e-05   23.6   0.0    1.4  1  RuvB_N        Holliday junction DNA helicase RuvB P-loop doma
    4.2e-05   23.6   0.1     0.0015   18.5   0.0    3.3  4  AAA_5         AAA domain (dynein-related subfamily)
    0.00016   21.7   0.0    0.00038   20.5   0.0    1.7  1  AAA_14        AAA domain
     0.0014   18.8   0.3     0.0039   17.3   0.0    1.9  1  AAA_33        AAA domain
     0.0016   18.4   0.0     0.0036   17.2   0.0    1.5  1  RsgA_GTPase   RsgA GTPase
     0.0028   17.0   0.1     0.0055   16.0   0.1    1.4  1  Zeta_toxin    Zeta toxin
     0.0036   17.7   0.0      0.017   15.5   0.0    2.1  2  AAA_16        AAA ATPase domain
  ------ inclusion threshold ------
      0.013   15.3   0.0      0.034   13.9   0.0    1.7  1  IstB_IS21     IstB-like ATP binding protein
      0.013   15.2   0.0      0.024   14.3   0.0    1.4  1  AAA_30        AAA domain
      0.022   14.9   0.6       0.45   10.6   0.0    2.5  2  AAA_2         AAA domain (Cdc48 subfamily)
      0.022   14.3   0.1      0.052   13.1   0.1    1.5  1  AAA_7         P-loop containing dynein motor region
      0.058   13.8   0.0       0.24   11.8   0.0    2.1  1  RNA_helicase  RNA helicase
      0.063   13.6   0.1       0.47   10.8   0.1    2.2  1  AAA_19        AAA domain
      0.081   12.1   0.0       0.17   11.1   0.0    1.5  1  NB-ARC        NB-ARC domain
      0.083   12.9   0.0       0.19   11.7   0.0    1.6  1  TsaE          Threonylcarbamoyl adenosine biosynthesis protei
      0.097   13.2   0.1       0.34   11.4   0.1    2.0  1  AAA_18        AAA domain
        0.1   12.2   0.0       0.95    9.0   0.0    2.3  2  AAA_25        AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.0   2.4e-13   2.1e-10       1      69 [.     288     369 ..     288     377 .. 0.80

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 2.4e-13
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSS.........STTHHHHHHHHHHHHHHHTS.....TSEEEEEETGGG CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellsk.........yvgesekkirelfkeakeka.....kpsilfiDEida 69 
                 +ll GppG GKT+la+  ak++g e++ei++s+ +sk          vg  + k+   +k+ +  +     +p ++++DE+d 
  KHJ34245.1 288 LLLAGPPGLGKTTLAHVCAKQAGYEIIEINASDERSKnvvnnmiktSVGTESVKTGSQVKSKSG-KsesytRPLCVIVDEVDG 369
                 69*********************************99999999988444444444444433222.13569899********96 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.0   3.9e-09   3.5e-06       3     125 ..     283     391 ..     279     402 .. 0.79

  Alignments for each domain:
  == domain 1  score: 27.3 bits;  conditional E-value: 3.9e-09
      AAA_22   3 ktagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelkaerlsseell.ealeqalraravielliiDEa 100
                 ++++il++ G++G GKTtl+   ++q+         + e+++++++ + s   + +++   +g e  +   + +++  +     + +r    ++i+DE+
  KHJ34245.1 283 QHRKILLLAGPPGLGKTTLAHVCAKQA---------GYEIIEINASDERSKNVVNNMIKTSVGTESVK---TGSQVKsKSGKSESYTRP--LCVIVDEV 367
                 589***********************9.........*************99999*********99999...666666344444444444..5******* PP

      AAA_22 101 qhlr.s..eealeeLrsllnlsrkgvql 125
                 + ++    +++++ +  ll+  +k++++
  KHJ34245.1 368 DGVDgGfiKAIINLC--LLD--QKNTSI 391
                 **9542445555555..566..666665 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.5   1.4e-08   1.2e-05      36      88 ..     277     327 ..     219     350 .. 0.77
   2 ?   -3.1   0.1       6.8   6.1e+03     106     138 ..     863     894 ..     846     924 .. 0.58

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 1.4e-08
       Rad17  36 kadvLesrkkriLLisGPsGCgkstvvkvLskelgiklrewlnpvslkepdnq 88 
                 ++d  e+++++iLL++GP+G gk+t  +v +k+ g++++e +n+   ++ +  
  KHJ34245.1 277 DTD-NEKQHRKILLLAGPPGLGKTTLAHVCAKQAGYEIIE-INASDERSKNVV 327
                 333.3667677***************************98.455554555444 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 6.8
       Rad17 106 iesfkeleLkdakylklqklGddlrtdkklilv 138
                 ++s ke eL+++++   + + +d    k+lil 
  KHJ34245.1 863 VKSTKERELHGSRNSSQETQQKD-SLVKSLILT 894
                 45556666666666433322222.223444443 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   0.0   3.8e-08   3.4e-05      28      61 ..     280     313 ..     261     334 .. 0.75

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 3.8e-08
      RuvB_N  28 kreealdhvllyGpPGlGkttlakiiakelgvkl 61 
                 + +++   +ll+GpPGlGkttla++ ak+ g ++
  KHJ34245.1 280 NEKQHRKILLLAGPPGLGKTTLAHVCAKQAGYEI 313
                 33444455799*****************999876 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.1   9.8e+02      79      98 ..      87     106 ..      84     118 .. 0.81
   2 !   18.5   0.0   1.7e-06    0.0015       2     122 ..     288     421 ..     287     432 .. 0.82
   3 ?   -1.7   0.0       2.9   2.6e+03      73      94 ..     712     733 ..     712     744 .. 0.84
   4 ?   -1.6   0.0       2.7   2.4e+03      34      57 ..     864     890 ..     850     905 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHSSEEE..- CS
       AAA_5  79 sevlnsLlslleerrlllee 98 
                  +++++L+++l er++++  
  KHJ34245.1  87 ESITGILHQILGERKYHTTT 106
                 57999***********9765 PP

  == domain 2  score: 18.5 bits;  conditional E-value: 1.7e-06
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.......G-SEEEEESGGG--HHHHHHHHH..HHHS CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.......egeilvlDEveraesevlnsLls..llee 91 
                 +lL GppG gK++la   a+  + e+ +++ ++  +++ +   ++++ gt+s + ++ v++         ++  +++DEv+ ++   +++ ++  ll++
  KHJ34245.1 288 LLLAGPPGLGKTTLAHVCAKQAGYEIIEINASDERSKNVVNNMIKTSVGTESVKTGSQVKSKSgksesytRPLCVIVDEVDGVDGGFIKAIINlcLLDQ 386
                 79*******************************99999999999999999999999999666688999999999********99999998887335899 PP

                 SEEE..-SSSEEE---..........-EEEEEESS CS
       AAA_5  92 rrllleeggelvkaknddller....frviatanp 122
                 +  ++   g+   a++++ +e+      +i  +n+
  KHJ34245.1 387 KNTSISRDGTNNPARKKKKIEKfkflRPIILICND 421
                 99988877777777665555554555455555555 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 2.9
                 SGGG--HHHHHHHHHHHHSSEE CS
       AAA_5  73 EveraesevlnsLlslleerrl 94 
                 E+e+ +++vl+sL+s ++   l
  KHJ34245.1 712 EIEKSNRAVLSSLISSFDATSL 733
                 89************99887665 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 2.7
                 TT--HHHHH--B--............- CS
       AAA_5  34 rdtteedlkgrreik...ngttslvds 57 
                 ++t+e++l g+r+ +   +++ slv+s
  KHJ34245.1 864 KSTKERELHGSRNSSqetQQKDSLVKS 890
                 68999********76555555555555 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   4.3e-07   0.00038       2     107 ..     285     403 ..     284     410 .. 0.69

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 4.3e-07
      AAA_14   2 rkilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpe........kllelileklke..............ekktylflDEiqevpe 78 
                 rkil++ G+   GKTtl++ ++k+      +i++in  der k+  ++         +        +k+               +  +++ DE+  v++
  KHJ34245.1 285 RKILLLAGPPGLGKTTLAHVCAKQAG---YEIIEINASDERSKNVVNNMiktsvgteS--------VKTgsqvksksgksesyTRPLCVIVDEVDGVDG 372
                 79*******************99999...9************8766543222222221........2223444555666777778899******99987 PP

      AAA_14  79 ..wekalkslvdegknldvivtGSnskllsk 107
                   ++ +++ ++ ++kn  +   G n+   +k
  KHJ34245.1 373 gfIKAIINLCLLDQKNTSISRDGTNNPARKK 403
                 5333444444446667777777777666655 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   4.4e-06    0.0039       2      32 ..     288     318 ..     287     360 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 4.4e-06
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdt 32 
                 +ll G+pG GK+tla+  +k+ g+++++ ++
  KHJ34245.1 288 LLLAGPPGLGKTTLAHVCAKQAGYEIIEINA 318
                 6899*******************99876554 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0     4e-06    0.0036      56     139 ..     237     325 ..     223     338 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 4e-06
                  GGG--HHHHHHHHHHHHHHTTSEEEE--TTTHTTHHHHHHHCTT.....SEEEEECSTTSSHHHHHHHHCTT-----S----------- CS
  RsgA_GTPase  56 iDlleeeeeleelkeelealgyevllvsaktkegleelkellkd.....ktsvlvGqSGvGKStLinallpelelktgevseklgrGkh 139
                  +Dl+ ++++ +++   l+a++  v+ +s k+k+++++ ++  ++     k+ +l+G+ G GK+tL  + + ++  ++ e+ ++++r k+
   KHJ34245.1 237 LDLVGDNRTHRQVLRWLKAWDSIVFPTSRKRKQEATAAQKDTDNekqhrKILLLAGPPGLGKTTLAHVCAKQAGYEIIEINASDERSKN 325
                  6888888889999999999999999999998877766655443211124899****************************999999876 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.1   6.1e-06    0.0055       7      56 ..     277     323 ..     269     347 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 6.1e-06
  Zeta_toxin   7 dkkypsqerPklillgGqpGAGKselaellkdelerqgnvvrldpDdlRe 56 
                 d+   ++++ k++ll+G pG GK++la+  +++   + +++++++ d R+
  KHJ34245.1 277 DT-DNEKQHRKILLLAGPPGLGKTTLAHVCAKQA--GYEIIEINASDERS 323
                 22.35669999*********************98..89999999887665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.9e-05     0.017      22      51 ..     282     312 ..     264     340 .. 0.77
   2 ?   -2.5   0.0       6.5   5.8e+03     134     150 ..     357     373 ..     345     388 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.9e-05
      AAA_16  22 grp.elvllsGesGvGKsslvrellralekd 51 
                  +   ++ll G++G GK++l+  +++++  +
  KHJ34245.1 282 KQHrKILLLAGPPGLGKTTLAHVCAKQAGYE 312
                 333589******************9998876 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 6.5
      AAA_16 134 erplvlvlDdlqwadea 150
                  rpl +++D+++ +d +
  KHJ34245.1 357 TRPLCVIVDEVDGVDGG 373
                 479********988765 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   3.8e-05     0.034       8      71 ..     245     309 ..     242     349 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.8e-05
   IstB_IS21   8 lrlaklpaqktledidfraarsldkrkvkeLatlsfiekkeni.vllGpsGvGKshlaialgvea 71 
                 +++  l+  k  ++i f ++r+ +++++++   ++  +++  i +l Gp+G GK+ la   +++a
  KHJ34245.1 245 THRQVLRWLKAWDSIVFPTSRKRKQEATAAQKDTDNEKQHRKIlLLAGPPGLGKTTLAHVCAKQA 309
                 55566788899999999999999999999888777777776651678***********9888876 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   2.7e-05     0.024      17     101 ..     284     371 ..     268     386 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.7e-05
      AAA_30  17 gdrvavltGpAGtGKttalkalreaweaaggrvi.glAptgkaAkvLa....eelgieastiakllkrlk.grarlepgtllivDEagmvd 101
                 ++++ +l Gp+G GKtt+  + +   ++ag+++i + A+ ++  +v++    +++g+e+  + + +k+   + +++++  ++ivDE+  vd
  KHJ34245.1 284 HRKILLLAGPPGLGKTTLAHVCA---KQAGYEIIeINASDERSKNVVNnmikTSVGTESVKTGSQVKSKSgKSESYTRPLCVIVDEVDGVD 371
                 567999***********877654...56688888456666666666663333477777776666666665655677777*******87766 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00051      0.45       6      80 ..     288     370 ..     283     380 .. 0.80
   2 ?    1.9   0.2      0.24   2.1e+02     141     168 ..     870     904 ..     844     907 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00051
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS................EEEEETGGG- CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG................ivllDEidKi 80 
                 +ll+gp g Gkt la   a+        ++i ++as+       +++v++ i ++ g  +++ g                  v +DE+d +
  KHJ34245.1 288 LLLAGPPGLGKTTLAHVCAKQAGY----EIIEINASDERS----KNVVNNMIKTSVGTESVKTGSqvksksgksesytrplCVIVDEVDGV 370
                 6899****************9997....999999998888....66666666665555555555555558889999999999999***966 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.24
                 S.......TTTTSGGG--HHHHHHTT--HHHHTT- CS
       AAA_2 141 k.......eeeeekkkeeveeelkkglipEllgRl 168
                 +       ++e+++k++ v++++   +  ++ gR+
  KHJ34245.1 870 ElhgsrnsSQETQQKDSLVKSLILTDFEKDFFGRI 904
                 133455558899999999****************8 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   5.8e-05     0.052      31      86 ..     283     335 ..     269     349 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 5.8e-05
       AAA_7  31 knkkpvllvGptGtGKtviikdllkkldkekylsltinfsaqtsanqlqdiieskl 86 
                 +++k +ll Gp G GKt++++ + k+     y ++ in s   s n + ++i+ ++
  KHJ34245.1 283 QHRKILLLAGPPGLGKTTLAHVCAKQAG---YEIIEINASDERSKNVVNNMIKTSV 335
                 688999**************99998777...*********************9877 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   0.00027      0.24       2      75 ..     289     380 ..     288     390 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00027
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkkl......................klkkkdsvysrnpeddfwdgYtgqevvvidDfgqvkdeenpsdlaelir 75 
                   +l Gp+g GK+tla+  ak+   ++                      ++++ ++    ++++   ++Yt++ +v++d++  v  +     ++ +i+
    KHJ34245.1 289 LLAGPPGLGKTTLAHVCAKQAGYEIieinasdersknvvnnmiktsvGTESVKTGSQVKSKSGKSESYTRPLCVIVDEVDGVDGG----FIKAIIN 380
                   689*************999999888999999999999999999988755544444446788888999999999999999887655....5555555 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   0.00052      0.47       7     115 ..     282     371 ..     275     391 .. 0.51

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00052
      AAA_19   7 alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgaeatTiHrlalldfddlltealelleeaeeekklqeeel 105
                 + ++k+ll+ ++pG GKT++  h++a          e i + a  +r+ + +++ +       +T  +   +++ ++++ +      + +++  ++  +
  KHJ34245.1 282 KQHRKILLLAGPPGLGKTTL-AHVCAKQAGY-----EIIEINASDERSKNVVNNMI-------KTSVGTESVKTGSQVKSK------SGKSESYTRPLC 361
                 567889999999*****975.4444432222.....23444455555554444444.......333333122222222111......122222223336 PP

      AAA_19 106 livDEfqdvd 115
                 +ivDE+  vd
  KHJ34245.1 362 VIVDEVDGVD 371
                 7777776666 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00019      0.17      15      43 ..     280     308 ..     267     358 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00019
                 TTTSCSEEEEEEESTTSSHHHHHHHHCCS CS
      NB-ARC  15 kdelqslvvalvGmgGvGKttlakqilnk 43 
                 +++  + ++ l G +G+GKttla+   ++
  KHJ34245.1 280 NEKQHRKILLLAGPPGLGKTTLAHVCAKQ 308
                 4445557***************9866555 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00021      0.19      18      47 ..     282     315 ..     264     319 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00021
                 H..TEEEEEEESTTSSHHHHHHHHHHHTT--..- CS
        TsaE  18 l..gdvilLeGdLGaGKTtlvrglakalgve..e 47 
                    ++++lL G+ G GKTtl++  ak+ g+e  e
  KHJ34245.1 282 KqhRKILLLAGPPGLGKTTLAHVCAKQAGYEiiE 315
                 234678********************99987544 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00038      0.34       2      31 ..     289     325 ..     288     350 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00038
      AAA_18   2 lltGtpGvGKttlakeLskrlgf.......gvnlrdv 31 
                 ll+G+pG GKttla+  +k  g+       +++ +++
  KHJ34245.1 289 LLAGPPGLGKTTLAHVCAKQAGYeiieinaSDERSKN 325
                 69***************99997777755554444444 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.0    0.0011      0.95      34      51 ..     286     303 ..     242     308 .. 0.93
   2 ?    0.0   0.0      0.59   5.3e+02     127     164 ..     592     628 ..     557     642 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0011
      AAA_25  34 elallaGapgtGKttlal 51 
                 ++ llaG+pg GKttla 
  KHJ34245.1 286 KILLLAGPPGLGKTTLAH 303
                 5689************95 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.59
      AAA_25 127 tadvdaleaaieevegvrlvviDplsralggdensnsd 164
                 +a +++l   ie+ +++  +++D +s+  + + n++s 
  KHJ34245.1 592 KAGMEKLKMMIES-NDINRIILDVFSQYPNKSFNDDSM 628
                 5667888888899.99**********999999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (957 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       704  (0.039266); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.75u 0.30s 00:00:01.05 Elapsed: 00:00:00.44
# Mc/sec: 6481.47
//
Query:       KHJ34246.1  [L=498]
Description: putative ring domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-14   54.3  14.8    2.4e-14   53.4   5.2    2.3  2  zf-RING_2       Ring finger domain
    7.9e-13   48.1   7.5    2.8e-09   36.7   2.3    2.2  2  zf-C3HC4_3      Zinc finger, C3HC4 type (RING finger)
      1e-10   41.1   1.5      1e-10   41.1   1.5    1.9  2  zf-RING_11      RING-like zinc finger
    2.1e-10   40.2  14.2    4.9e-09   35.9   5.5    2.3  2  zf-C3HC4_2      Zinc finger, C3HC4 type (RING finger)
    6.1e-08   32.4  10.1    5.8e-07   29.3   3.8    2.3  2  Prok-RING_4     Prokaryotic RING finger family 4
      4e-07   29.8  13.3    3.4e-06   26.8   4.9    2.3  2  zf-C3HC4        Zinc finger, C3HC4 type (RING finger)
      6e-07   29.7   3.5      6e-07   29.7   3.5    2.4  2  zf-rbx1         RING-H2 zinc finger domain
    2.5e-06   27.3   2.7    2.5e-06   27.3   2.7    2.3  2  zf-RING_5       zinc-RING finger domain
    4.4e-06   26.6   0.2    4.4e-06   26.6   0.2    2.5  2  zf-RING_UBOX    RING-type zinc-finger
     0.0045   17.0   4.3     0.0055   16.7   0.1    2.2  2  HypA            Hydrogenase/urease nickel incorporation, meta
     0.0054   16.8   0.9     0.0054   16.8   0.9    1.9  2  zf-ANAPC11      Anaphase-promoting complex subunit 11 RING-H2
  ------ inclusion threshold ------
      0.036   14.3   9.9       0.18   12.1   5.1    2.6  2  zinc_ribbon_9   zinc-ribbon
       0.17   11.7   1.7       0.37   10.6   1.7    1.6  1  zf-Nse          Zinc-finger of the MIZ type in Nse subunit
       0.23   11.3   1.4        0.9    9.4   0.1    2.2  2  Rad50_zn_hook   Rad50 zinc hook motif
       0.76    9.4  14.2        0.3   10.7   4.1    2.3  2  Zn_ribbon_17    Zinc-ribbon, C4HC2 type
       0.89    9.8  13.7        2.6    8.3   2.2    2.6  2  zf-C3HC4_4      zinc finger of C3HC4-type, RING
        1.2    9.2   8.3        1.1    9.2   0.5    2.4  2  zinc-ribbons_6  zinc-ribbons
        4.7    7.4   9.0         14    5.8   0.6    2.4  2  DUF1272         Protein of unknown function (DUF1272)
        6.9    6.8   7.4        7.6    6.6   0.4    2.8  2  DZR             Double zinc ribbon


Domain annotation for each model (and alignments):
>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   2.1     0.013        12      24      43 ..      23      44 ..      19      45 .. 0.86
   2 !   53.4   5.2   2.5e-17   2.4e-14       2      44 .]     320     362 ..     319     362 .. 0.98

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.013
   zf-RING_2 24 vfhreClerwlrssst..CPlC 43
                v++++C ++w + +    CP+C
  KHJ34246.1 23 VYCHQCEQEWWEDEYGleCPYC 44
                59********98877789**** PP

  == domain 2  score: 53.4 bits;  conditional E-value: 2.5e-17
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssstCPlCr 44 
                 eC+IC++e++ +d+v++lpC+H f++ C++ wl++++tCP+Cr
  KHJ34246.1 320 ECSICMDEVKLGDEVIVLPCKHWFDEACVTAWLKEHNTCPICR 362
                 8*****************************************9 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.2   3.2e-05      0.03      23      49 ..      22      50 ..      17      51 .. 0.91
   2 !   36.7   2.3     3e-12   2.8e-09       3      48 ..     319     366 ..     317     367 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.2e-05
                EEE-HHHHHHHHH..TT-B-TTT--B--E CS
  zf-C3HC4_3 23 lvlCeeCaekllk..rkkkCpiCrrpiek 49
                +v+C++C +++++     +Cp+C  +i++
  KHJ34246.1 22 VVYCHQCEQEWWEdeYGLECPYCEGNITE 50
                689*********999999*******9987 PP

  == domain 2  score: 36.7 bits;  conditional E-value: 3e-12
                 SB-TTTSSS...BS-EEETTEEEEEE-HHHHHHHHHTT-B-TTT--B-- CS
  zf-C3HC4_3   3 eeCviCler...prnvvllpCgHlvlCeeCaekllkrkkkCpiCrrpie 48 
                  eC+iC+++     +v++lpC+H+ + e+C++ +lk++++CpiCr+ i+
  KHJ34246.1 319 GECSICMDEvklGDEVIVLPCKHW-FDEACVTAWLKEHNTCPICRKGIN 366
                 79******8555677*********.********************9886 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   1.5   1.1e-13     1e-10       1      29 []     320     348 ..     320     348 .. 0.98
   2 ?   -2.6   0.2       5.2   4.9e+03       2       7 ..     358     363 ..     358     369 .. 0.75

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 1.1e-13
  zf-RING_11   1 eCsICLeefkpgqalfilpCsHtFHfkCI 29 
                 eCsIC++e+k g+++++lpC+H+F   C+
  KHJ34246.1 320 ECSICMDEVKLGDEVIVLPCKHWFDEACV 348
                 9***************************7 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 5.2
  zf-RING_11   2 CsICLe 7  
                 C IC  
  KHJ34246.1 358 CPICRK 363
                 99**65 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   1.4   0.00093      0.88      21      40 .]      23      44 ..      22      44 .. 0.94
   2 !   35.9   5.5   5.2e-12   4.9e-09       1      40 []     320     361 ..     320     361 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00093
  zf-C3HC4_2 21 vfCqkCilrsLeekn..eCPlC 40
                v+C +C ++++e++   eCP C
  KHJ34246.1 23 VYCHQCEQEWWEDEYglECPYC 44
                68**********99889***** PP

  == domain 2  score: 35.9 bits;  conditional E-value: 5.2e-12
  zf-C3HC4_2   1 kCpiCldmlkdpsvvt..pCgHvfCqkCilrsLeekneCPlC 40 
                 +C iC+d+ k +  v+  pC+H f + C+  +L+e+n CP+C
  KHJ34246.1 320 ECSICMDEVKLGDEVIvlPCKHWFDEACVTAWLKEHNTCPIC 361
                 6******98866444444************************ PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.4    0.0073       6.8      20      41 ..      24      49 ..      19      53 .. 0.79
   2 !   29.3   3.8   6.1e-10   5.8e-07       1      43 [.     321     368 ..     321     371 .. 0.92

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0073
  Prok-RING_4 20 vCkeCfdsk..dls...sCPlCqrris 41
                  C++C +++  d +    CP C+ +i 
   KHJ34246.1 24 YCHQCEQEWweD-EyglECPYCEGNIT 49
                 59***9999642.2569*****98875 PP

  == domain 2  score: 29.3 bits;  conditional E-value: 6.1e-10
  Prok-RING_4   1 CvlCgeq...ekkailepCgHlvCkeCfdsk..dlssCPlCqrrisks 43 
                  C +C  +   + ++i+ pC+H + ++C  ++  ++++CP+C++ i+++
   KHJ34246.1 321 CSICMDEvklGDEVIVLPCKHWFDEACVTAWlkEHNTCPICRKGINEE 368
                  999999988899******************998999*******99886 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.0   1.3    0.0028       2.6      21      41 .]      24      44 ..      23      44 .. 0.92
   2 !   26.8   4.9   3.6e-09   3.4e-06       1      41 []     321     361 ..     321     361 .. 0.94

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0028
                B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4 21 fCskCirkilksrkkvkCPlC 41
                +C++C +++++++   +CP C
  KHJ34246.1 24 YCHQCEQEWWEDEYGLECPYC 44
                8**********888888***9 PP

  == domain 2  score: 26.8 bits;  conditional E-value: 3.6e-09
                 -TTT-S--SS-E...E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn..elleCkHsfCskCirkilksrkkvkCPlC 41 
                 C+iC++e+k  +   +l+CkH f ++C++ +lk  ++++CP+C
  KHJ34246.1 321 CSICMDEVKLGDevIVLPCKHWFDEACVTAWLK--EHNTCPIC 361
                 *******99777669******************..9999**** PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   1.5      0.43   4.1e+02      35      55 .]      23      45 ..      13      45 .. 0.83
   2 !   29.7   3.5   6.3e-10     6e-07      11      55 .]     318     362 ..     313     362 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.43
     zf-rbx1 35 aFHlhCiskWlkt..rkvCPlcr 55
                ++ ++C ++W +     +CP c+
  KHJ34246.1 23 VYCHQCEQEWWEDeyGLECPYCE 45
                57789******9976678***95 PP

  == domain 2  score: 29.7 bits;  conditional E-value: 6.3e-10
     zf-rbx1  11 eeacieckapgdeecpvvlGeCgHaFHlhCiskWlktrkvCPlcr 55 
                 +++c  c  + +    v++  C+H F   C++ Wlk++++CP+cr
  KHJ34246.1 318 KGECSICMDEVKLGDEVIVLPCKHWFDEACVTAWLKEHNTCPICR 362
                 556666666555443344449***********************8 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.7      0.63     6e+02      24      43 ..      24      45 ..      23      46 .. 0.73
   2 !   27.3   2.7   2.7e-09   2.5e-06       1      44 []     320     363 ..     320     363 .. 0.96

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.63
   zf-RING_5 24 fCekClkkll..ekeavCpiCr 43
                +C++C ++    e   +Cp C+
  KHJ34246.1 24 YCHQCEQEWWedEYGLECPYCE 45
                7888877766667778898885 PP

  == domain 2  score: 27.3 bits;  conditional E-value: 2.7e-09
   zf-RING_5   1 hCnkCfeklskeekfyltsCgHifCekClkkllekeavCpiCrk 44 
                 +C++C+++++  +++++++C+H f e+C++  l++ ++CpiCrk
  KHJ34246.1 320 ECSICMDEVKLGDEVIVLPCKHWFDEACVTAWLKEHNTCPICRK 363
                 6********99999****************************97 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.2       1.1     1e+03      19      39 .]      23      42 ..      23      42 .. 0.71
   2 !   26.6   0.2   4.7e-09   4.4e-06       1      39 []     321     359 ..     321     359 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 1.1
  zf-RING_UBOX 19 tFCreClwelskslegafkCP 39
                  ++C++C  +++   e  + CP
    KHJ34246.1 23 VYCHQCE-QEWWEDEYGLECP 42
                  69****8.5666666667776 PP

  == domain 2  score: 26.6 bits;  conditional E-value: 4.7e-09
  zf-RING_UBOX   1 CpIClelft..dP.lvlpCGHtFCreClwelskslegafkCP 39 
                   C+IC+++ +  d  +vlpC H F + C+   + +l+ + +CP
    KHJ34246.1 321 CSICMDEVKlgDEvIVLPCKHWFDEACV---TAWLKEHNTCP 359
                   ******99999664557***********...999*******9 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.1   5.8e-06    0.0055      62     101 ..      14      53 ..       5      57 .. 0.84
   2 ?    1.1   0.8      0.41   3.9e+02      68      94 ..     316     363 ..     300     372 .. 0.73

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 5.8e-06
                 EEEEEE--EEEETTTS-EEECHHHHHS-TTTSSS-EEEEE CS
        HypA  62 LeieevpvkvrCreCgkefeleekalrCpkCgsadveivs 101
                 L+ +  + +v+C++C++e+ ++e+ l+Cp C+++ +eiv+
  KHJ34246.1  14 LDATGPRSVVYCHQCEQEWWEDEYGLECPYCEGNITEIVT 53 
                 6666677899**********9987899******9998876 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.41
                 --EEEETTTS-EEECHHHHH......................S-TTTSS CS
        HypA  68 pvkvrCreCgkefeleekal......................rCpkCgs 94 
                 ++k +C+ C  e++l ++ +                      +Cp C +
  KHJ34246.1 316 EAKGECSICMDEVKLGDE-VivlpckhwfdeacvtawlkehnTCPICRK 363
                 677788888888887643.224566777777777777777778998875 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2       5.6   5.3e+03      58      77 ..      26      44 ..      18      49 .. 0.62
   2 !   16.8   0.9   5.7e-06    0.0054      42      80 ..     331     364 ..     312     368 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 5.6
                HHHHHHHHHHHSTSSB-TTT CS
  zf-ANAPC11 58 lhcilkwletetskglcpmc 77
                + c ++w e e     cp c
  KHJ34246.1 26 HQCEQEWWEDEYG-LECPYC 44
                4577777766543.457776 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 5.7e-06
                 TTTS-EEEBTTS-EEEHHHHHHHHHHHSTSSB-TTTSSB CS
  zf-ANAPC11  42 GddcplvlGkckhnfhlhcilkwletetskglcpmcrqt 80 
                 Gd+  +++  ckh f + c++ wl+++   + cp+cr+ 
  KHJ34246.1 331 GDE--VIVLPCKHWFDEACVTAWLKEH---NTCPICRKG 364
                 444..34456**************976...67*****85 PP

>> zinc_ribbon_9  zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   5.1    0.0002      0.18       3      33 ..      23      50 ..      21      52 .. 0.83
   2 ?    4.3   0.1     0.053        50      19      31 ..     354     365 ..     346     368 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.0002
  zinc_ribbon_9  3 yWChqCdrfVsvspdedsdvlCPhCgggFVE 33
                    +ChqC ++++  +de     CP+C+g   E
     KHJ34246.1 23 VYCHQCEQEWW--EDEYGLE-CPYCEGNITE 50
                   59********9..5666778.*****99877 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.053
  zinc_ribbon_9  19 dsdvlCPhCgggF 31 
                    + ++ CP C+ g 
     KHJ34246.1 354 EHNT-CPICRKGI 365
                    4445.*****996 PP

>> zf-Nse  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.7   0.00039      0.37      29      56 ..     338     361 ..     315     362 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00039
                 SS--EEEHHHHHHHCTTTS-EE-SCCC- CS
      zf-Nse  29 kCpHvFEreaIlelikrkktvkCPvagC 56 
                  C+H F++  +++ +  k++  CP+  C
  KHJ34246.1 338 PCKHWFDEACVTAWL--KEHNTCPI--C 361
                 6**************..88999**9..7 PP

>> Rad50_zn_hook  Rad50 zinc hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.78   7.4e+02      21      31 ..      40      50 ..      34      50 .. 0.79
   2 ?    9.4   0.1   0.00095       0.9      15      34 ..     352     371 ..     351     382 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.78
                   E-TTT--EE-H CS
  Rad50_zn_hook 21 cCPlCgRelde 31
                    CP C+ +++e
     KHJ34246.1 40 ECPYCEGNITE 50
                   7*****98875 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00095
                    HTT-SEE-TTT--EE-HHH.H CS
  Rad50_zn_hook  15 lkeakgcCPlCgReldeeh.r 34 
                    lke++  CP C + ++ee+  
     KHJ34246.1 352 LKEHN-TCPICRKGINEESsS 371
                    57777.************944 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   2.5      0.04        37      30      46 ..      26      42 ..      21      50 .. 0.85
   2 ?   10.7   4.1   0.00032       0.3       5      46 ..     319     359 ..     315     366 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.04
  Zn_ribbon_17 30 asCarewfenddlaeCp 46
                   +C +ew+e +   eCp
    KHJ34246.1 26 HQCEQEWWEDEYGLECP 42
                  58********9989998 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00032
  Zn_ribbon_17   5 ksCayCelavk.grvvlcgvCeHvlHasCarewfenddlaeCp 46 
                    +C++C  +vk g  v+   C+H   ++C+ +w+++ +   Cp
    KHJ34246.1 319 GECSICMDEVKlGDEVIVLPCKHWFDEACVTAWLKEHN--TCP 359
                   58****98887677888899**************9999..676 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   2.2    0.0027       2.6      19      42 .]      23      44 ..      21      44 .. 0.92
   2 ?    6.5   4.0      0.01       9.7       1      42 []     321     361 ..     321     362 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0027
  zf-C3HC4_4 19 sfClsCisslqkepdgeqllCplC 42
                ++C +C +++++++ g  l Cp C
  KHJ34246.1 23 VYCHQCEQEWWEDEYG--LECPYC 44
                79**********9977..8****9 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.01
  zf-C3HC4_4   1 CPiCldYLe...kPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 C iC+d  +   + + l+C h f   C++++ ke      +Cp C
  KHJ34246.1 321 CSICMDEVKlgdEVIVLPCKHWFDEACVTAWLKEH----NTCPIC 361
                 77777754322256789***************999....359999 PP

>> zinc-ribbons_6  zinc-ribbons
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.5    0.0012       1.1       2      28 ..      24      50 ..      22      57 .. 0.85
   2 ?    3.2   2.1      0.09        85       3      39 ..     321     365 ..     315     373 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.0012
                    --SSS-S--EE-SSEEE-TTT--EEEE CS
  zinc-ribbons_6  2 kCpeCqqelekrgeqyhCeaCqedlkk 28
                    +C++C+qe  +++  ++C  C+ ++++
      KHJ34246.1 24 YCHQCEQEWWEDEYGLECPYCEGNITE 50
                    799999999999999999999987765 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.09
                     -SSS-S--EE-S.......SEEE-TTT--.EEEEEEE-SSS-S-- CS
  zinc-ribbons_6   3 CpeCqqelekrg.......eqyhCeaCqe.dlkkealCpeCeqel 39 
                     C  C  e++  +       ++ + eaC +  lk++++Cp C++ +
      KHJ34246.1 321 CSICMDEVKLGDevivlpcKHWFDEACVTaWLKEHNTCPICRKGI 365
                     777877777433477777777777888764577889999998766 PP

>> DUF1272  Protein of unknown function (DUF1272)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.6     0.015        14      31      52 ..      24      49 ..      21      51 .. 0.74
   2 ?    5.0   2.2     0.027        25       5      48 ..     318     362 ..     316     367 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.015
     DUF1272 31 FCaeCaeevlen....vCPncgGelv 52
                +C++C +e  e+     CP c G+++
  KHJ34246.1 24 YCHQCEQEWWEDeyglECPYCEGNIT 49
                99999988775423337******976 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.027
     DUF1272   5 rpnCecCdkdlppdseearicsyEctFCaeCaeevl..envCPncg 48 
                 + +C  C  +++  + e ++    + F ++C+++ l  +n+CP c 
  KHJ34246.1 318 KGECSICMDEVKLGD-EVIVLPCKHWFDEACVTAWLkeHNTCPICR 362
                 568999999999998.8899999999*********977799**996 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.4    0.0081       7.6      13      35 ..      23      45 ..      15      51 .. 0.78
   2 ?    2.2   1.7      0.19   1.8e+02       4      36 ..     347     363 ..     306     374 .. 0.60

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0081
         DZR 13 rfCseCgtklkavaaedrCpsCg 35
                 +C++C ++  + +    Cp C+
  KHJ34246.1 23 VYCHQCEQEWWEDEYGLECPYCE 45
                58999999998777789999997 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.19
         DZR   4 CgeelppdarfCseCgtklkavaaedrCpsCge 36 
                 C ++  ++                +++Cp C +
  KHJ34246.1 347 CVTAWLKE----------------HNTCPICRK 363
                 22223333................445555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (498 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3609.95
//
Query:       KHJ34247.1  [L=154]
Description: putative mitochondria fission 1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-25   89.3   0.7    1.9e-25   88.6   0.7    1.3  1  Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
    1.7e-16   59.5   0.0    2.8e-16   58.9   0.0    1.4  1  Fis1_TPR_N  Fis1 N-terminal tetratricopeptide repeat
  ------ inclusion threshold ------
      0.034   14.2   0.9      0.067   13.3   0.9    1.5  1  TPR_2       Tetratricopeptide repeat
       0.13   13.0   0.1       0.28   11.9   0.1    1.6  1  TPR_6       Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.6   0.7   4.3e-29   1.9e-25       1      53 []      74     126 ..      74     126 .. 0.99

  Alignments for each domain:
  == domain 1  score: 88.6 bits;  conditional E-value: 4.3e-29
                 HHHHHHHHHHHHHHT-HHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHTTT CS
  Fis1_TPR_C   1 reclYylAlGhyklgeYseArryvdalLeiEPenrQaqsLkeliedkikkegl 53 
                 reclYylAlGhyklg YseAr+y+d lLe+EP+n Qa  L+ li+dk++kegl
  KHJ34247.1  74 RECLYYLALGHYKLGVYSEARKYNDLLLEKEPGNLQADRLRGLIDDKVTKEGL 126
                 9***************************************************8 PP

>> Fis1_TPR_N  Fis1 N-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.9   0.0   6.3e-20   2.8e-16       1      33 []      37      69 ..      37      69 .. 0.98

  Alignments for each domain:
  == domain 1  score: 58.9 bits;  conditional E-value: 6.3e-20
  Fis1_TPR_N  1 qtkFnYAWgLvkSknredqqeGiaLLeelyrds 33
                qtkFn+AWgL+kS++r +q+eG++LL++++r+s
  KHJ34247.1 37 QTKFNFAWGLIKSNVRTEQKEGVRLLSDIFRTS 69
                9******************************85 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.9   1.5e-05     0.067       2      33 ..      75     106 ..      74     107 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.5e-05
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPn 33 
                 e+ly+l+l +yklg y eA+++ +  le +P+
  KHJ34247.1  75 ECLYYLALGHYKLGVYSEARKYNDLLLEKEPG 106
                 78*******************97777777776 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   6.2e-05      0.28       1      31 [.      75     105 ..      75     107 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 6.2e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T CS
       TPR_6   1 dAlyklalsyrklgdtdkAlealerlikeYP 31 
                 ++ly+lal ++klg +++A+++ + l+++ P
  KHJ34247.1  75 ECLYYLALGHYKLGVYSEARKYNDLLLEKEP 105
                 68******************98666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1120.36
//
Query:       KHJ34248.1  [L=343]
Description: putative cut9 interacting protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-28   99.8   0.0    2.4e-28   99.2   0.0    1.3  1  TatD_DNase  TatD related DNase
  ------ inclusion threshold ------
      0.091   12.6   1.7       0.24   11.2   1.7    1.7  1  Coat_X      Spore Coat Protein X and V domain


Domain annotation for each model (and alignments):
>> TatD_DNase  TatD related DNase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.2   0.0   2.7e-32   2.4e-28      53     253 ..      41     341 ..       8     342 .. 0.87

  Alignments for each domain:
  == domain 1  score: 99.2 bits;  conditional E-value: 2.7e-32
                 TTEEEEE---GGGGGC........................................C.CCHH.HHHHHH.HHCCCTSEEEEEEEEEET-CCCCCGH... CS
  TatD_DNase  53 nkvyavlGiHPnevde........................................asedll.eelkel.anvkhskvvaiGeiGLDyysreestk... 106
                  +v++++G+HP+ ++                                         ++++ l ++l+e+ +++k  ++++iGeiGLD+  r + ++   
  KHJ34248.1  41 RRVIPSFGWHPWFSHViyddtnlqsmnpsqekdfkinhyksilipipedikfieslPNPRSLkNFLEEIkNYLKIFPTALIGEIGLDKNFRIPIQWndn 139
                 469*********9999999***********************************9944444446677776679***************55555555555 PP

                 ...........................HHHHHHHHHHHHHHHHTTEEEEEEEES-HHHHHHHH...............................HHCGG CS
  TatD_DNase 107 ...........................eaqeevFeeqlrlAkelklplviHlrkaeedlleil...............................keaae 147
                                             +q+ +F++ql+lA e+++ ++iH+++a+  + + l                               +++  
  KHJ34248.1 140 kniiinninitpgtrngrqlskyrvnmNHQKIIFRAQLQLAGEMNRSVSIHSVQAHGAVFDTLqdlwkeykiqnsthkktsiiqsknleietidTKL-S 237
                 5679999999999999999**************************************9999999999999999999999999999999988865222.3 PP

                 CCS..EEEETT--S-HHHHHHHHHT....TEEEEE-GGGGTTTTHHHHHHHHHS-GGGEEE---TTSSEECCCTTSE--GGGHHHHHHHHHHHHTS-HH CS
  TatD_DNase 148 aka..kvvlHsfsgsaeeakkflkl....gyyislsglltfknakelrelvkavpldrlLiETDaPyltpkpyrgkrnepanvayvveklaelkaltle 240
                 +++  +++lH +sgs++ +k++l+      +y+s+ +ll+     +++e++kavp dr+L+E+D  + +      +   ++ ++++++ +++ k+++le
  KHJ34248.1 238 RPFprRICLHAYSGSIDLLKQYLDPkvpaIIYFSFCALLNLPT-DKVTEVIKAVPEDRILVESD--FDKV-----TDDMDQLLEKMCRRICNDKNWPLE 328
                 44466******************76689899******999955.78******************..4444.....788999999999***********9 PP

                 HHHHHHHHHHHHH CS
  TatD_DNase 241 elaeitaeNakrl 253
                 +  ei+ +N +++
  KHJ34248.1 329 KGVEILGNNWRQF 341
                 9999999998875 PP

>> Coat_X  Spore Coat Protein X and V domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   1.7   2.7e-05      0.24       4      38 ..     202     236 ..     200     237 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.7e-05
      Coat_X   4 tqdllqvsktkQlsrekIiIkdSenVtVtttDtqa 38 
                  qdl    k++ +   k+ I+ S+n +++t Dt++
  KHJ34248.1 202 LQDLWKEYKIQNSTHKKTSIIQSKNLEIETIDTKL 236
                 58899999999999*******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       617  (0.0344135); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2617.68
//
Query:       KHJ34249.1  [L=151]
Description: hypothetical protein EV44_g4298 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0075   16.5   0.0      0.011   15.9   0.0    1.3  1  RNase_H   RNase H


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   6.1e-07     0.011      43     142 ..      20     122 ..       5     123 .. 0.64

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 6.1e-07
                 HHHHHHHHHHHHHH.TT.SC.....SEEEEEES-HHHHHHHHC.CCHHHHHTTSSSETTSSBHTTHHHHHHHHHCHCSSEEEEEE-SCCSSSTHHHHHH CS
     RNase_H  43 nnraELsAvieaLk.alksd.....ekvniytDSkYvvkgitq.wvhrwkknawkttseqkpvknkdlaellkelakkkkvqlkwvkgHaGvpkgNema 134
                    aE  A+ + +k a + +     +++ i+tD + + k +++  +  +++  +  + ++   k+ ++ ++l  ++++ k++  wv+ HaG+ +    a
  KHJ34249.1  20 IEDAEAFAALQGIKaAITLStirfsKDLWIFTDNEGIAKRFLTkTLTLTSQSVYLEALKF--TKKWKTRARL-PHISEGKIKKYWVPSHAGI-SVDLLA 114
                 556666777777763322223444489999999987766544303333333333334444..3444555555.57779**************.59999* PP

                 HHHHHHHH CS
     RNase_H 135 DrlAkeaa 142
                 D+ Ak++a
  KHJ34249.1 115 DSEAKRGA 122
                 *9999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1103.75
//
Query:       KHJ34250.1  [L=588]
Description: putative carboxylesterase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-53  182.0   0.0      5e-53  180.7   0.0    1.5  1  COesterase     Carboxylesterase family
     0.0014   18.5   0.0     0.0089   15.9   0.0    2.0  1  Abhydrolase_3  alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> COesterase  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.7   0.0   5.5e-57     5e-53      24     347 ..      52     436 ..      29     487 .. 0.75

  Alignments for each domain:
  == domain 1  score: 180.7 bits;  conditional E-value: 5.5e-57
                 EEEEEEEEESSB---GGGTTS--BE----SSEEECBS---BESEECSSSSSCGHHCHHH................................BES---EE CS
  COesterase  24 evdaFlGiPYAepPvgelRFkkPepaepwtgvrdAtkfspaCpqnaeksekeekeleaw................................vsEDCLyL 90 
                 e+++F Gi Y+       RF++P p          ++f ++Cp+++ +++k+  +++ +                                  EDCL+L
  KHJ34250.1  52 EYYSFNGIQYGRV---LDRFSPPAPI-------CHKSFFKRCPKENPNISKPRLSNNLPrgypkcpqaipdwmtfknekhlekksikipdnEVEDCLFL 140
                 8888888888876...4566666662.......2223333333333333333333333333333344455555555555566899************** PP

                 EEEEESSS......SSTTSSEEEEEEE--STTTS-BGCG.S-THHHHHHH......TSEEEEE----HHHHH-B-....SSTTSBS-HHHHHHHHHHHH CS
  COesterase  91 nvytPkek......keakkklPVlVwihGggfqtgsase.ydgsaLaaeg......nvivVtinYRlGvlGFlst....gdeeapGNvGllDqvlALrW 172
                 +v +Pk+       ++ ++  PVlVwih ggf++gs     d+s L+++       + i+V++nYRlG++GFl+     +d++   NvGllDq++AL W
  KHJ34250.1 141 DVIVPKKVwdqthdHSLQSFAPVLVWIHDGGFTSGSRILhEDPSILLKRSleihgeGTIIVSMNYRLGLFGFLASerypSDKDSYSNVGLLDQRMALGW 239
                 *****9889999988888888****************8868899999998999999******************9888889****************** PP

                 HHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSGGGTT................SBSEEEEES--TTSTTTSBSHHHHHHHHHHHHTTS-CSSHHHHHH CS
  COesterase 173 VkenIasFGGdpervtlfGesAGaasvsllllsplsrg................lfkraIlqSGsalspwaiqkkarkrakklakkvgckassskelve 255
                 V+++I +FGGd  r+t++Ge+AGa s+  +l+ p   +                 f++aIl S   ++p++ ++ a+ ++ ++ +k+   + +  + ++
  KHJ34250.1 240 VEKHIVKFGGDRFRITVVGEGAGAGSIMHHLTAPNITRhffprlhakshfrrnfPFQSAILKSP-TFQPIVPSQLAVIVT-QILEKASTVKGQLLNRIS 336
                 *********************************766545**************99********6.677766665555555.555555554666679*** PP

                 HHHCS-HHHHHHCCGGSSSSSSTTC-SSS-B--S.....SSSSS-HHHHHHCGC...CSEEEEEEETTTTHHHHCCHSTTTSSSSHHHHHHHHHHHHHH CS
  COesterase 256 clrsksaeelldaqekaleasssklvsfaPvvdg.....dflpekPeellkseg...kvplliGvnkdegllflaylldkeksvkkkeeklsesllkde 346
                  l + ++e+l++ +  ++ +s    ++f+P vd      +++p+ P++ +k  +   ++++l+G+ ++eg ++    ++++    +   ++  +++++e
  KHJ34250.1 337 KLHELPYETLYSLNLAMVRESPHGTFTFGPAVDYtkdhrSYVPDFPLRRIKAGQmakSINILVGYRRNEGYYITPSSMKTDLGFRDHMARIFPTIMRNE 435
                 *********************************99999999***********88*********************999885443333333333333333 PP

                 H CS
  COesterase 347 l 347
                 +
  KHJ34250.1 436 I 436
                 3 PP

>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   9.9e-07    0.0089       1      89 [.     164     271 ..     164     283 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 9.9e-07
                    EEEE--STTTS--TTTTHHHHHHHHHHH.....TSEEEEEE---T.....TTS-TTH........HHHHHHHHHHHHHHTHHHHTETTCEEEEEEE CS
  Abhydrolase_3   1 lvyfHGGGfvlgsldthdalcrelakel.....gavvvsvdYrlA.....PehpfPa........avedalaalrwlaeqawelgadpsrivlaGd 78 
                    lv++H GGf++gs   h++    l + l     g ++vs++Yrl         ++P          + d   al w++++  ++g d  ri+++G+
     KHJ34250.1 164 LVWIHDGGFTSGSRILHEDPSILLKRSLeihgeGTIIVSMNYRLGlfgflASERYPSdkdsysnvGLLDQRMALGWVEKHIVKFGGDRFRITVVGE 259
                    699**********99994444444333311222789*******97666666788986222222224668889999*****88************** PP

                    THH.HHHHHHHH CS
  Abhydrolase_3  79 SaG.Gnlaaava 89 
                     aG G ++++++
     KHJ34250.1 260 GAGaGSIMHHLT 271
                    ***556777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (588 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       294  (0.016398); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3994.73
//
Query:       KHJ34251.1  [L=532]
Description: putative aspartate kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-38  132.6   0.1    3.8e-38  131.5   0.1    1.6  1  AA_kinase    Amino acid kinase family
    4.8e-13   48.6   1.2    6.3e-08   32.3   0.1    2.7  2  ACT          ACT domain
    1.8e-11   43.7   8.5    1.5e-09   37.5   0.5    3.1  3  ACT_7        ACT domain
  ------ inclusion threshold ------
      0.025   14.7   0.0      0.079   13.1   0.0    1.8  1  TIP49_C      TIP49 AAA-lid domain
      0.074   12.3   0.1       0.15   11.3   0.1    1.4  1  ATP-synt_10  ATP10 protein
       0.13   13.0   0.7        3.2    8.5   0.1    3.1  3  PMC2NT       PMC2NT (NUC016) domain
       0.15   12.0   0.7       0.35   10.8   0.2    1.8  2  DUF2808      Protein of unknown function (DUF2808)
       0.37   11.0   2.8        0.5   10.6   0.1    2.5  3  REGB_T4      T4-page Endoribonuclease RegB


Domain annotation for each model (and alignments):
>> AA_kinase  Amino acid kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.5   0.1   1.7e-41   3.8e-38       2     240 ..      35     338 ..      34     341 .. 0.85

  Alignments for each domain:
  == domain 1  score: 131.5 bits;  conditional E-value: 1.7e-41
                 EEEEEE-TTCCCCTCCHHHHHHHHHHHHHHHHTTEEEEEE--H.......HHHHHHHHH......TCCCCCHHHC........................ CS
   AA_kinase   2 rvVvKlGGssltdkeeaslrrlaeqiaalkesgnklvvVhGgg.......sftdgllal......ksglssgelaa....................... 64 
                 +vV K+GG+s++    +++ ++ae+i   + ++nk++vV++++       ++t +ll++      ++ +s   ++                        
  KHJ34251.1  35 WVVQKFGGTSIG----KFVVKIAEDIVSNSLKDNKIAVVCSARssgkkveGTTSRLLEIlnllqaANCISNPDSEHyemivnqfenlvrlicedhvnaa 129
                 79**********....8899**********************556799999999999997777764444444443366677777776666665555555 PP

                 ....E..HHHHHHHHH........................................HHHHHHHHHHHHHHHHTTHGEEEE-GGGTCEECCCE.....HH CS
   AA_kinase  65 .glrstleeagevatr........................................dalaslgerlvaallaaglpavglsaaaldateagr...degs 119
                  +             +                                        d l+s+ge+l+ + + a l+++ + a+++d+++      +   
  KHJ34251.1 130 iR-------------DisdkdiraslvkdiekeckeisdyrkaaerwkleinertkDRLVSFGEKLSCRYVVAVLEDREIEAEYVDLEAIFNsksSRSL 215
                 54.............0444444444555599999999999999999999*************************************8655448888888 PP

                 HTTTCEEECCHHHHHHHT.T.-EEEEESEEEEETTTE....EEEE-HHHHHHHHHHHCTSSEEEEEESSSSCESSTTTTCCTTCECCEEEHHHCHHCSS CS
   AA_kinase 120 dgnvesvdaeaieellea.g.vvpvltgfigldeege....lgrgssDtiaallAealgAdkliiltdVdGVydadpkkvpdarllpeisvdeaeesas 212
                 d++ +++++e i+e + a g  vpv+tgf+g+ + g     +grg +D +a+l A+ l+Ad+l i+++VdG+++adp kvp+arll+ i+ +ea+e   
  KHJ34251.1 216 DQDFYRHMSEIIRERVLAcGnRVPVITGFFGIVPGGLmdgdIGRGYTDLCAVLTAVGLKADELQIWKEVDGIFTADPLKVPTARLLSSITPSEAAE--- 311
                 99999999******9988866*********99999999999*******************************************************... PP

                 S.TTTHHHHCHHHHHHHHHCTT-EEEEE CS
   AA_kinase 213 elatgGmkvkhpaalaaarrggipvvIt 240
                  l+ +G +v+h+ +++ + +++ p++I+
  KHJ34251.1 312 -LTFYGSEVIHHLTMDQVVKANPPIRIR 338
                 .*********************777664 PP

>> ACT  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.1   9.9e-06     0.022      11      64 ..     404     454 ..     393     457 .. 0.90
   2 !   32.3   0.1   2.8e-11   6.3e-08       5      52 ..     472     515 ..     468     526 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 9.9e-06
                 TTHHHHHHHHHHHTTSEEEEEEEEEESTTECEEEEEEEEEEHHHHHHHHHHHHT CS
         ACT  11 PGlLarvfgaladrgiNidsieqrssedkvagivfvvivvdeedleevlealkk 64 
                 +G +a+vf++l ++ i++d i++++++    ++++     +e+dl +v  +l++
  KHJ34251.1 404 HGFFAKVFSILDKLLISVDLISTSEVHV---SLAIHSASLSEDDLNQVSHELQE 454
                 79*************************8...89999999999999988777765 PP

  == domain 2  score: 32.3 bits;  conditional E-value: 2.8e-11
                 EEEESSTTHHHHHHHHHHHTTSEEEEEEEEEESTTECEEEEEEEEEEH CS
         ACT   5 vgvpDrPGlLarvfgaladrgiNidsieqrssedkvagivfvvivvde 52 
                  ++++++G++++ f++l++++iNi++i+q+ se      + +vi ++e
  KHJ34251.1 472 ADMRNMVGIAGKMFSTLGENNINIEMISQGASEI----NISCVISTNE 515
                 689*****************************76....5555555544 PP

>> ACT_7  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       1.3   2.8e+03       4      38 ..      33      68 ..      30      75 .. 0.64
   2 !   10.4   0.3    0.0002      0.44       2      47 ..     386     431 ..     385     442 .. 0.87
   3 !   37.5   0.5   6.6e-13   1.5e-09       4      64 ..     462     524 ..     459     525 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.3
                EEEEEEEE-S-.---SS--HHHHHHH.HHHTTT--- CS
       ACT_7  4 dgwiklsvvgsglpfdvtGivaklas.pLaeagIsi 38
                +gw++ ++ g+++   v++i+  ++s  L +++I +
  KHJ34251.1 33 KGWVVQKFGGTSIGKFVVKIAEDIVSnSLKDNKIAV 68
                677777888874443477777776542677777766 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.0002
                 EEEEEEEEEE-S-.---SS--HHHHHHHHHHTTT---EEEE.-SS-E CS
       ACT_7   2 sedgwiklsvvgsglpfdvtGivaklaspLaeagIsifqiS.tyrtd 47 
                 ++d +++++v+++  ++ + G+ ak++s L +  Is+  iS ++ + 
  KHJ34251.1 386 IKDKISVINVHSN-KRSRSHGFFAKVFSILDKLLISVDLIStSEVHV 431
                 67999********.7889***********************777665 PP

  == domain 3  score: 37.5 bits;  conditional E-value: 6.6e-13
                 EEEEEEEE-S-.---SS--HHHHHHHHHHTTT---EEEE...-SS-EEEEEEGGGHHHHHHHHH CS
       ACT_7   4 dgwiklsvvgsglpfdvtGivaklaspLaeagIsifqiS...tyrtdyiLVpeedlekAveaLh 64 
                 d+++ ls+vg++++  ++Gi+ k++s L e++I+i +iS   +++ +++++  +++ +A+++Lh
  KHJ34251.1 462 DHMAILSLVGADMRN-MVGIAGKMFSTLGENNINIEMISqgaSEINISCVISTNEATRAMSVLH 524
                 78899********99.***********************************************9 PP

>> TIP49_C  TIP49 AAA-lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   3.5e-05     0.079      10      42 ..     164     196 ..     156     206 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.5e-05
     TIP49_C  10 gvkldeeAldlLakigtetSLRYaiqLltpasi 42 
                 +++++e  +d+L++ g++ S RY++  l+  +i
  KHJ34251.1 164 KLEINERTKDRLVSFGEKLSCRYVVAVLEDREI 196
                 689**********************99986666 PP

>> ATP-synt_10  ATP10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   6.5e-05      0.15      78     133 ..     348     402 ..     334     417 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.5e-05
  ATP-synt_10  78 nGKlFlspksyfkadkalyfPnlvGktLa.sskeqsledvlkgkvsvVrlfssvvge 133
                  nG + +++++++  dk+l + nl+ ++ + ++ ++ +  ++k+k+sv++++s++ + 
   KHJ34251.1 348 NGTIVVPNEKFY--DKSLSCSNLSLTNSTrKAPKRPTAVTIKDKISVINVHSNKRSR 402
                  778899999998..8999999999544444789999****************98765 PP

>> PMC2NT  PMC2NT (NUC016) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1    0.0014       3.2       7      75 ..      58     120 ..      57     130 .. 0.86
   2 ?    0.7   0.0      0.38   8.4e+02      14      36 ..     216     238 ..     206     242 .. 0.78
   3 ?   -1.4   0.0       1.8     4e+03      68      84 ..     406     422 ..     363     459 .. 0.66

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.0014
      PMC2NT   7 anaLpaeDldfyrsldpefaksldeqserllslinsllklaaskseisassklededdveekfksvvdv 75 
                 +n+L  + ++   s  ++  k+++ +++rll+++n ll++a++ s+      +e+ + ++++f+++v +
  KHJ34251.1  58 SNSLKDNKIAVVCSA-RSSGKKVEGTTSRLLEILN-LLQAANCISNPD----SEHYEMIVNQFENLVRL 120
                 8999999999999*9.****************998.569999998883....45888888899998865 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.38
      PMC2NT  14 Dldfyrsldpefaksldeqserl 36 
                 D dfyr +++ +++++ ++++r+
  KHJ34251.1 216 DQDFYRHMSEIIRERVLACGNRV 238
                 67899999888888888888876 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 1.8
      PMC2NT  68 kfksvvdvvDsllEkad 84 
                  f++v  ++D+ll ++d
  KHJ34251.1 406 FFAKVFSILDKLLISVD 422
                 55556666666654444 PP

>> DUF2808  Protein of unknown function (DUF2808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       2.4   5.4e+03      38      76 ..      42      79 ..      37      83 .. 0.72
   2 ?   10.8   0.2   0.00016      0.35      92     119 ..     323     350 ..     317     353 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 2.4
     DUF2808 38 gealakltisqpdfvedikfdlkkveafvgttrnkgekl 76
                g++++k+++++ +     +++ +k+ ++ +  r++g+k+
  KHJ34251.1 42 GTSIGKFVVKIAEDIVSNSLKDNKIAVVCS-ARSSGKKV 79
                678899999998866677888888888874.46666665 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00016
     DUF2808  92 itfdePippgktvtvvlknvrNPrfgGt 119
                 +t+d+ ++++  +++++knv+NP+  Gt
  KHJ34251.1 323 LTMDQVVKANPPIRIRIKNVKNPSGNGT 350
                 6899********************9997 PP

>> REGB_T4  T4-page Endoribonuclease RegB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0         2   4.6e+03     112     144 ..      45      78 ..      39      81 .. 0.78
   2 ?   -0.9   0.2      0.74   1.7e+03      38      83 ..     140     185 ..     111     230 .. 0.64
   3 ?   10.6   0.1   0.00022       0.5     114     148 ..     349     384 ..     325     387 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2
                 EEEEE--SS---SSSEEE.EEEEEE--SS----- CS
     REGB_T4 112 lgftvckpnekfkdpslq.crmaiinsrrlpgka 144
                 +g  v+k  e +   sl+  ++a++ s r  gk 
  KHJ34251.1  45 IGKFVVKIAEDIVSNSLKdNKIAVVCSARSSGKK 78 
                 5667888888888888863689999999999985 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.74
                 ---EEE--HHHHHHHHHTSTT--HHHHHHHHGGGGHHHHHHHHSSS CS
     REGB_T4  38 ssfhlkysqhlldraiqreidetyvfelfhkikdhvlevneflsmp 83 
                 +s+     +   + +  r+  e + +e+  + kd+++   e ls  
  KHJ34251.1 140 ASLVKDIEKECKEISDYRKAAERWKLEINERTKDRLVSFGEKLSCR 185
                 4444444444444455555556666666666666666665555544 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 0.00022
                 EEE--SS---SSSEEEEE.EEEE--SS------S-- CS
     REGB_T4 114 ftvckpnekfkdpslqcr.maiinsrrlpgkaskav 148
                  t++ pnekf d sl c  +++ ns r   k   av
  KHJ34251.1 349 GTIVVPNEKFYDKSLSCSnLSLTNSTRKAPKRPTAV 384
                 48999************6389999988776666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       899  (0.0501422); expected 358.6 (0.02)
Passed bias filter:                      628  (0.0350271); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 3885.47
//
Query:       KHJ34252.1  [L=527]
Description: putative peroxin-3 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   1.1e-165  552.2   1.2   1.3e-165  552.0   1.2    1.0  1  Peroxin-3  Peroxin-3


Domain annotation for each model (and alignments):
>> Peroxin-3  Peroxin-3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  552.0   1.2  7.1e-170  1.3e-165       1     470 []       7     462 ..       7     462 .. 0.95

  Alignments for each domain:
  == domain 1  score: 552.0 bits;  conditional E-value: 7.1e-170
   Peroxin-3   1 rflrrnrrklaitagvvgagYlakqYvlkkleearerlsseriakenLrrRFeqnqeDctfTvlaLLPtlteqilealdvEeitqeLqqkkaeraarss 99 
                 r++rr+r+++a++ gv+g gY+a+qY+l+k+ earer++++ria+enLrrRFeqnqeDct TvlaLLPt++++i+++l +E+it+eLqq+ka++ ar+ 
  KHJ34252.1   7 RWFRRHRTPIAFGLGVIGFGYIATQYLLGKILEARERINNDRIARENLRRRFEQNQEDCTLTVLALLPTAADNIIAELGTEKITYELQQQKAAKFARTG 105
                 7***********************************************************************************************988 PP

   Peroxin-3 100 eakseeekssaspsvededdskslseeesssssstvsasseassseesaseeseksekeseessskprksKaeLWnelkiksitRtltliYtlslLtLl 198
                 +a+++   ss+ ps++d +d++s+    s +s+s+v+as+   +s+ +a++++ + +    e+++k +ksK +LWnelki++itR++tliYtl+lLtL+
  KHJ34252.1 106 AAHQNLI-SSEVPSLTD-EDGRSIT---SLQSESGVHASQVVIPSSVEAGNNTLEGT----ETDQKVKKSKLQLWNELKISAITRSFTLIYTLALLTLF 195
                 8877766.777999999.6999999...****************9999988877444....5699********************************** PP

   Peroxin-3 199 triQLnlLgRrsYLssvvslakeeeteeeeeeesllseatislennddeeeeqeegedeeterkYLtfSWWLLnrGWkdvaerVeaaVeevfgslslkd 297
                 triQLnlLgRrsYLssvvsla +  +          +++ islen+dd+++eq +g+d+et+++YLtfSWWLL+rGW+d++ +VeaaV + fgsls++d
  KHJ34252.1 196 TRIQLNLLGRRSYLSSVVSLAASGMD----------HQSIISLENHDDDNSEQVYGSDFETNKMYLTFSWWLLHRGWRDIMLKVEAAVVNIFGSLSPRD 284
                 **********************9985..........47899********************************************************** PP

   Peroxin-3 298 elsleelsellkevrkkveketeeeekrsdflsillPpreeeeevLresgil.......sleeleeesssLrkLldETsdliespdfslvleslldegf 389
                 els++++s+l+ +vrk +e++t+++++++++l++llPpr++ee +L+esgi+        +++l + +s Lr+LldETsdli+ p f+++l++lld+gf
  KHJ34252.1 285 ELSFDKFSDLTLKVRKIIEGSTPFDRQQNKWLKYLLPPRDQEESILEESGIKekeasstPPTYLIARNSALRRLLDETSDLIDAPPFTHILTLLLDAGF 383
                 *********************************************************99788999********************************** PP

   Peroxin-3 390 stllesleaevafkkkesasssekaeeeeeeeeekkvkLAkllpvlsrqahailngvpneylealesvreLeafsAvvYss 470
                 stl++++ +++  k ++  s++ + +  +e  +e  vkL+ +l+vl++qaha+++g pneyl+++e+vreLeaf+AvvYss
  KHJ34252.1 384 STLVDQKISQQVYKFSS-ISKAPNVKV-QEIMDEIPVKLPIILAVLTKQAHAMGRGAPNEYLQSMEKVRELEAFAAVVYSS 462
                 *******9998888765.444444444.5667999*********************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (527 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       704  (0.039266); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.39
# Mc/sec: 4035.47
//
Query:       KHJ34253.1  [L=171]
Description: putative membrane biogenesis protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.9e-27   93.4   9.2    5.9e-27   93.4   9.2    1.7  2  TB2_DP1_HVA22  TB2/DP1, HVA22 family
  ------ inclusion threshold ------
      0.057   13.9   0.7        5.9    7.4   0.0    2.2  2  DUF2231        Predicted membrane protein (DUF2231)


Domain annotation for each model (and alignments):
>> TB2_DP1_HVA22  TB2/DP1, HVA22 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       0.3   2.7e+03      26      41 ..      37      52 ..      35      61 .. 0.72
   2 !   93.4   9.2   6.6e-31   5.9e-27       1      76 [.      69     143 ..      69     144 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.3
  TB2_DP1_HVA22 26 vfafltvvesladvll 41
                   v+afl v+ +++ +++
     KHJ34253.1 37 VYAFLGVIATYFAFIF 52
                   6777777777775554 PP

  == domain 2  score: 93.4 bits;  conditional E-value: 6.6e-31
  TB2_DP1_HVA22   1 PayaslkaleskeksdetkwltYWvvfafltvvesladvllswiPfYylfKllfllwlvlpqtqgatyvYekflrp 76 
                    P y+sl+al s +k+d+t+wltYWvvf+fl+v+es++ ++++w+PfYy+fK++f+lwl+lp t+ga++v+++f++p
     KHJ34253.1  69 PGYYSLEALFSVSKNDDTQWLTYWVVFSFLNVFESAV-SVVYWFPFYYTFKFIFVLWLALPITSGAQLVFKSFIQP 143
                    99********999999*********************.5666********************************99 PP

>> DUF2231  Predicted membrane protein (DUF2231)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0   0.00066       5.9      66      98 ..      28      60 ..      15      64 .. 0.89
   2 ?    4.5   0.6     0.005        45      71     100 ..     109     138 ..      86     141 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00066
     DUF2231 66 lreeeqvsplylalslvvvvlllvqgwlGaeLv 98
                l+++++v ++y +l+++++ + ++   lG++L 
  KHJ34253.1 28 LEKQTSVPKVYAFLGVIATYFAFIFFNLGGQLL 60
                567889*************************97 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.005
     DUF2231  71 qvsplylalslvvvvlllvqgwlGaeLvye 100
                    p y ++++++v+ l++ ++ Ga+Lv++
  KHJ34253.1 109 YWFPFYYTFKFIFVLWLALPITSGAQLVFK 138
                 445678999******************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (171 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      248  (0.0138323); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1386.28
//
Query:       KHJ34254.1  [L=123]
Description: putative nadh-ubiquinone oxidoreductase kda subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-05   25.2   0.1    2.3e-05   24.4   0.1    1.5  1  Complex1_LYR    Complex 1 protein (LYR family)
    3.2e-05   24.6   0.1    4.8e-05   24.0   0.1    1.3  1  Complex1_LYR_2  Complex1_LYR-like
  ------ inclusion threshold ------
      0.099   12.7   0.0       0.19   11.9   0.0    1.5  1  Vps51           Vps51/Vps67


Domain annotation for each model (and alignments):
>> Complex1_LYR  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.1   3.8e-09   2.3e-05       1      58 [.      23      84 ..      23      85 .. 0.85

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 3.8e-09
  Complex1_LYR  1 rqvLsLYRalLRearkfpdyn....treyfrrriRdeFrknkhvtDpekieellkkgreeLe 58
                  ++v++ YR ++R+a  ++       +  ++r +iR+eF+kn+ v+   +   ll++++ e++
    KHJ34254.1 23 KRVIKSYRDWIRAAPEIQTMYslsiPVSQLRTKIRQEFEKNRYVNQLPATDVLLTQCNAEFQ 84
                  689999******996666555677888888**********************9999987765 PP

>> Complex1_LYR_2  Complex1_LYR-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.1     8e-09   4.8e-05       1      62 [.      25     102 ..      25     116 .. 0.85

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 8e-09
  Complex1_LYR_2   1 vlsLYrrllrelrelppelr......slgdayvraefrrhk..........hlk.npeeialflknqreYaellerynp 62 
                     v++ Yr ++r+++ ++++++      s++++++r+ef++++           l+  ++e+++ ++ ++++ ++l+++ p
      KHJ34254.1  25 VIKSYRDWIRAAP-EIQTMYslsipvSQLRTKIRQEFEKNRyvnqlpatdvLLTqCNAEFQETMNYWKQVPHILKYFRP 102
                     6889********9.667888899999*************8899999999984443667999*************99977 PP

>> Vps51  Vps51/Vps67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.1e-05      0.19      41      80 ..      20      59 ..       9      66 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.1e-05
       Vps51 41 elkalVydnYskLisasdtIrkmksemdkldqklselkqa 80
                + +  V ++Y++ i a+ +I++m s   +++q   +++q+
  KHJ34254.1 20 DAQKRVIKSYRDWIRAAPEIQTMYSLSIPVSQLRTKIRQE 59
                667889*****************99886666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (123 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       688  (0.0383736); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 966.73
//
Query:       KHJ34255.1  [L=70]
Description: hypothetical protein EV44_g0087 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1168  (0.0651459); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 533.34
//
Query:       KHJ34256.1  [L=826]
Description: putative cephalosporin c regulator 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      8e-28   96.9   0.1    3.2e-27   94.9   0.0    2.1  2  RFX_DNA_binding  RFX DNA-binding domain
  ------ inclusion threshold ------
      0.037   14.0   0.0       0.17   11.9   0.0    2.2  2  Cdc6_C           CDC6, C terminal winged helix domain


Domain annotation for each model (and alignments):
>> RFX_DNA_binding  RFX DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.9   0.0   3.6e-31   3.2e-27       1      77 [.     217     292 ..     217     294 .. 0.96
   2 ?   -3.3   0.0       1.7   1.5e+04      21      34 ..     562     575 ..     560     583 .. 0.79

  Alignments for each domain:
  == domain 1  score: 94.9 bits;  conditional E-value: 3.6e-31
  RFX_DNA_binding   1 qkfalqwlnanfeeaedvsvprqevYaeYlsicsklklkplnaasFgKlirsvFpnvktrRLgtrgqskYhyvGirl 77 
                      q+fa+ w+++ +++ +  svpr +vY++Y+s c+++++++ln+asFgKl+r +Fp +ktrRLg+rg+skYhyv ++l
       KHJ34256.1 217 QVFAMLWISQVCSKGK-GSVPRGRVYSNYVSRCATERVTVLNPASFGKLVRVLFPGLKTRRLGVRGESKYHYVEFSL 292
                      689*********9988.89*****************************************************99875 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.7
  RFX_DNA_binding  21 prqevYaeYlsics 34 
                      +r+++Y+e++++ +
       KHJ34256.1 562 NRDQMYEEWITMVR 575
                      7999**99988776 PP

>> Cdc6_C  CDC6, C terminal winged helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.59   5.3e+03      43      60 ..     176     193 ..     169     195 .. 0.75
   2 ?   11.9   0.0   1.9e-05      0.17      10      81 ..     229     299 ..     220     302 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.59
                 HHHHHHHHHTTSEEEEEE CS
      Cdc6_C  43 sdllseLemlgileleks 60 
                 s+  +eLem+ + +++k 
  KHJ34256.1 176 SSAANELEMRQLFQANKH 193
                 566789999999888776 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 1.9e-05
                 HCSSS-EEHHHHHHHHHHHHHHTT-----HHHHHHHHHHHHHTTSEEEEEEE-CC.C-EEEEEEESSSCHHH CS
      Cdc6_C  10 ksgkeevttgevyevYkslCesegvdpltqrevsdllseLemlgileleksskGrregrtrkisLnvdpddv 81 
                 ++gk +v+ g+vy  Y s C  e v++l+  ++ +l++ L + g+ +++ + +G+++  + ++sL  d+ d+
  KHJ34256.1 229 SKGKGSVPRGRVYSNYVSRCATERVTVLNPASFGKLVRVL-FPGLKTRRLGVRGESKYHYVEFSLEDDQPDL 299
                 48999****************************9999988.6777777777777777777777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (826 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       965  (0.0538234); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.27s 00:00:00.93 Elapsed: 00:00:00.42
# Mc/sec: 5924.45
//
Query:       KHJ34257.1  [L=691]
Description: putative calcium influx-promoting protein ehs1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.5e-137  457.4   0.3   6.9e-137  457.1   0.3    1.1  1  Mid1      Stretch-activated Ca2+-permeable channel component
    0.00026   21.6   4.2      0.098   13.3   1.0    2.5  2  Fz        Fz domain
  ------ inclusion threshold ------
      0.042   14.0   0.1       0.26   11.4   0.0    2.3  2  hGDE_N    N-terminal domain from the human glycogen debranchi


Domain annotation for each model (and alignments):
>> Mid1  Stretch-activated Ca2+-permeable channel component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  457.1   0.3  1.2e-140  6.9e-137       1     425 [.     202     659 ..     202     660 .. 0.94

  Alignments for each domain:
  == domain 1  score: 457.1 bits;  conditional E-value: 1.2e-140
        Mid1   1 tvyisanicsqpslkaektkeeepqLtlyvstsssnkkpgpekeeseqt.....veefeeGyvnatvnasedlYiavsapnstskasgswnyelavStd 94 
                 t+yi++++c qp++  ++  + +pqL+ly+s+s+snk pgp ++++ +      ++++ +Gy   t+++++d+Y++v+a n+++ + g ++ ++a+S+d
  KHJ34257.1 202 TLYITVTTCLQPKSVVSSIFTPPPQLQLYISQSQSNKFPGPVRADNPSLnlsqeIVNLVSGYTLRTIDVTGDVYFGVYAANDSN-FMGIYSAQIAASID 299
                 68**********9999*************************987665555667799*************************999.8************* PP

        Mid1  95 dlvhqy..ddrsnlllvDsdsnsALlvtgnlteseadaeskkelvkkeapYelfasseedssklkglerSlcalkngaqlasskn....nseevklslt 187
                  ++h+y  +++snl++ Dsd++s Ll+t+ + ++ ++++  +e+v+  +p+ +f+ +++ ++++ gle+S+c+l+++ ++++ +      +++v++s+t
  KHJ34257.1 300 GPYHNYedNSDSNLFVADSDTDSVLLYTNPFIHDGTNHTLLREWVTSPPPFVIFVAEASVTRNIIGLENSYCGLEQNVNMVTPNIletgVKSNVATSVT 398
                 ******988899*********************************************************************999988887888889*** PP

        Mid1 188 trglgnkvkqqfyvkgLnasttYlailvkkgskknstas.gggkvfkavefetkaddnCqliydLdFCdevaYavPsnsklfknktelaklYddyaksl 285
                 t gl+n+++qqf++++L++ ttY++ l+   ++k+ +   ggg+vf++++f+t ++dnC li++L+FCd+vaY+vPsn+++f n ++la++Yd+ ++++
  KHJ34257.1 399 TIGLSNLPRQQFLIDDLKPGTTYIVALAIARNSKEINVVgGGGRVFRSFTFNTLSADNCDLIHSLSFCDQVAYSVPSNPRKFPNRSSLAAFYDNSTEAI 497
                 ***************************99986665554489********************************************************** PP

        Mid1 286 yanFskslqqiaCeaesdarYSllrtCddCaeaYknWLCaVtiPRCedfsseakylqernvgqaflng.............aaknssRnslidevikPg 371
                 ++nF+k+l+qi+Ce +++ +YSl+rtC+dCa+aYk+WLCaV iPRC+d  s +++lq+r+++qaf+ng             aa++ sRn  ide+i+Pg
  KHJ34257.1 498 FKNFEKVLAQIPCEINPSGQYSLARTCNDCARAYKTWLCAVNIPRCTDILSPNTWLQPRAIDQAFPNGshlstafiedyktAAERFSRNVKIDEFISPG 596
                 ********************************************************************************999999************* PP

        Mid1 372 pYkevlPCedlCyklvrsCpaslgFsCPkkks.llelsYgl.....rsedge.....itCnylGa 425
                 pYke+lPC++lC++lv sCpas+gF+CP++++ ++++sYg+     +++  +     itCn++Ga
  KHJ34257.1 597 PYKEILPCQELCHSLVSSCPASMGFNCPRPGQiGFNTSYGQmpqgnTDN--DgrkvdITCNFPGA 659
                 ****************************************944443222..133567*******7 PP

>> Fz  Fz domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   1.0   1.6e-05     0.098       1      64 [.     457     545 ..     457     557 .. 0.61
   2 !    8.7   0.1   0.00042       2.5      70      90 ..     599     619 ..     591     640 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.6e-05
                 -EE-.E...ETT-S-SEE-GGGS.S-SSHHHH.HHH.......................HHHHHGGGG-..HHHTTSTTHHHHHHS---EE CS
          Fz   1 Cepi.elelCkaigynstslpnllgheteeev.aee.......................leefsllvkl..eCspalklflCsllfpkCep 64 
                 C  i +l++C ++ y+  s p  + +++   +   +                         ++sl   +  +C +a+k +lC++ +p+C++
  KHJ34257.1 457 CDLIhSLSFCDQVAYSVPSNPRKFPNRSSLAAfY-DnsteaifknfekvlaqipceinpSGQYSLAR-TcnDCARAYKTWLCAVNIPRCTD 545
                 6667778899999877766555555544443321.12334454455555555555544444444333.2589*****************74 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00042
                 EEE---HHHHHHHHTT-GGGS CS
          Fz  70 aplppCrslCeavrdsCekvl 90 
                 + ++pC++lC++  +sC  ++
  KHJ34257.1 599 KEILPCQELCHSLVSSCPASM 619
                 4679*************9988 PP

>> hGDE_N  N-terminal domain from the human glycogen debranching enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.53   3.1e+03      71      87 ..     191     211 ..     181     212 .. 0.61
   2 ?   11.4   0.0   4.4e-05      0.26      16      68 ..     618     670 ..     609     681 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.53
                 ......EEE---EEEEE---E CS
      hGDE_N  71 e....ekktkgsgYfnVePrL 87 
                 +    ++ +k+++Y++V   L
  KHJ34257.1 191 SarilKNSKKNTLYITVTTCL 211
                 1334335556699*9998766 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 4.4e-05
                 EEEE-S-SSSS---TT--EEEE----SSS-EEEEEEE-S-CEEEEEEEEE-TT CS
      hGDE_N  16 slwtNyPeegkeFeRdkfrelklkssfekdiyidipitkaGaFafyftydeee 68 
                 s+  N+P  g+    +++ +++  +  ++ +++di ++ +GaF f + y++++
  KHJ34257.1 618 SMGFNCPRPGQIGFNTSYGQMPQGNTDNDGRKVDITCNFPGAFYFSLAYNHKP 670
                 55678888777555588999999999999********************8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (691 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 5247.97
//
Query:       KHJ34258.1  [L=193]
Description: putative duf1649 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-55  185.3   0.4    7.7e-55  185.1   0.4    1.0  1  ATG101      Autophagy-related protein 101
  ------ inclusion threshold ------
      0.017   15.2   0.1      0.025   14.6   0.1    1.2  1  HERV-K_REC  Rec (regulator of expression encoded by corf) of 


Domain annotation for each model (and alignments):
>> ATG101  Autophagy-related protein 101
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.1   0.4   8.6e-59   7.7e-55       1     153 [.      12     167 ..      12     169 .. 0.97

  Alignments for each domain:
  == domain 1  score: 185.1 bits;  conditional E-value: 8.6e-59
      ATG101   1 eltversqvrevvkailhtIlFhRllgkvkpkdvevesldltyvavsdeelerlvdekvealvralekasssks......gqivvqFfekkrkkawfgk 93 
                 e+++++s+v+evv++ilhtI+F+R++++++pk+ +v  ldl ++ v+d ele+l+d+++++l+r+l+++   ++      g++ vqFfekkrkkawf+k
  KHJ34258.1  12 EVFADPSSVKEVVRGILHTIFFQRFFPPIRPKSCDV--LDLNLPFVDDVELETLIDQRTATLIRQLNTSCDDENrnsgvrGTMFVQFFEKKRKKAWFTK 108
                 689*********************************..***************************999887777899********************** PP

      ATG101  94 keeevvWEqWivkvevvetprseserekvrealessLeeallkilelvnekkdhiPpitt 153
                  eeev+WEqW+++v++++ pr+e e++kvr+a+e++L +a++ki++ vn++kdhiPpit+
  KHJ34258.1 109 GEEEVCWEQWTLDVTLAT-PRTELEKSKVRKATEQMLLKAAMKIVTTVNRDKDHIPPITS 167
                 *****************9.9**************************************97 PP

>> HERV-K_REC  Rec (regulator of expression encoded by corf) of HERV-K-113
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.1   2.7e-06     0.025      21      69 ..     104     155 ..      93     169 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.7e-06
  HERV-K_REC  21 lpstkkaepptwaqlkkltqlat..kylentkvtqtpesmllaalm.ivsmv 69 
                    tk  e   w q      lat    le +kv ++ e mll a m iv+ v
  KHJ34258.1 104 AWFTKGEEEVCWEQWTLDVTLATprTELEKSKVRKATEQMLLKAAMkIVTTV 155
                 55688899999***999999999444699************96655277766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1474.47
//
Query:       KHJ34259.1  [L=106]
Description: putative cell cycle control protein cwf14 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-37  127.9   0.7    2.7e-37  127.8   0.7    1.0  1  G10       G10 protein
  ------ inclusion threshold ------
      0.074   13.4   0.1       0.17   12.3   0.0    1.6  2  DUF1040   Protein of unknown function (DUF1040)


Domain annotation for each model (and alignments):
>> G10  G10 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.8   0.7     3e-41   2.7e-37       1     101 [.       1     102 [.       1     106 [] 0.95

  Alignments for each domain:
  == domain 1  score: 127.8 bits;  conditional E-value: 3e-41
         G10   1 mpkir.tkkkkkppegfekiedtleeleaklreaekeskeskkkeeslWkiarinhersryvyelyykrkaiskelydyllkekyadaeLiakWkkaGY 98 
                 mp ir ++k+k+pp+g+ +ied l  +++k+++ae+es+ +  +++  W+i++inh+rsry+yelyyk+ aiskely++llk+++ad++LiakWkk+GY
  KHJ34259.1   1 MPPIRtSSKRKAPPDGYADIEDDLLIFSNKMKDAENESTINVPRHQVHWPIFQINHQRSRYIYELYYKKGAISKELYEWLLKNGFADKMLIAKWKKTGY 99 
                 7889945678999************************************************************************************** PP

         G10  99 ekL 101
                 ek+
  KHJ34259.1 100 EKV 102
                 *97 PP

>> DUF1040  Protein of unknown function (DUF1040)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   1.9e-05      0.17      40      65 ..      15      40 ..       4      46 .. 0.86
   2 ?   -2.1   0.0      0.58   5.2e+03      46      57 ..      86      97 ..      74     103 .. 0.67

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.9e-05
     DUF1040 40 geleeltddvliyhlkmresdkeemi 65
                + +++++dd+li+  km+++++e++i
  KHJ34259.1 15 DGYADIEDDLLIFSNKMKDAENESTI 40
                56789***************999877 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.58
     DUF1040 46 tddvliyhlkmr 57
                +d +li + k  
  KHJ34259.1 86 ADKMLIAKWKKT 97
                566666665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      237  (0.0132188); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.34u 0.24s 00:00:00.58 Elapsed: 00:00:00.37
# Mc/sec: 848.87
//
Query:       KHJ34260.1  [L=198]
Description: hypothetical protein EV44_g0025 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.048   14.2   0.0      0.095   13.3   0.0    1.4  1  DUF565        Protein of unknown function (DUF565)
       0.11   11.9   0.0       0.15   11.4   0.0    1.3  1  CN_hydrolase  Carbon-nitrogen hydrolase


Domain annotation for each model (and alignments):
>> DUF565  Protein of unknown function (DUF565)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.1e-05     0.095       9      41 ..       7      47 ..       2      50 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.1e-05
      DUF565  9 vaalivlftEvlsrliYrrelks........kssllveilN 41
                +++++v+f+E++s l Y ++l+s        +++ll++  N
  KHJ34260.1  7 LIVTFVIFIELISSLSYTKSLESrpdpvnllRRKLLLSSSN 47
                78899**************7666668888888888776655 PP

>> CN_hydrolase  Carbon-nitrogen hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   1.6e-05      0.15      90     136 ..      34      79 ..      17     137 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.6e-05
                   TEEEEEEEEEEEETTSEEEEEEE-SS--E.ECTTSCECCGHHTSCS-S CS
  CN_hydrolase  90 gklqayntavlldldgklvgkyrKlhLfp.geprpptaverelfepgd 136
                    +l  + + +ll+ ++ l++++rK+ Lf+ +  rp+ + +++ +++  
    KHJ34260.1  34 VNL--LRRKLLLSSSNILLSNHRKRLLFRgKDSRPGVKCNSSFYKQSR 79 
                   344..8999********************9999999999999999943 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       365  (0.0203581); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1505.25
//
Query:       KHJ34261.1  [L=830]
Description: putative HbrB [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-44  150.8   0.4    1.3e-43  148.9   0.4    2.1  1  HbrB      HbrB-like


Domain annotation for each model (and alignments):
>> HbrB  HbrB-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.9   0.4   7.4e-48   1.3e-43       3     169 .]     510     655 ..     508     655 .. 0.92

  Alignments for each domain:
  == domain 1  score: 148.9 bits;  conditional E-value: 7.4e-48
        HbrB   3 addaWqllcvrvlplFngedlrvpiEdlnklvelhiqlvierakalsllvedleeLlstglltLenkLsqleeerllkrLveiWkffytqvlpyleavf 101
                 +ddaW++l++++l++F+g+dlr+p+Edln++v lhiq+ +++ ++++ l +dl +Ll++g++ L+++L++++++ ++++Lve+W f++t +lp+++avf
  KHJ34261.1 510 PDDAWPFLKTKLLSVFEGDDLRLPVEDLNQVVLLHIQASHRKRTQTKNLNDDLLDLLRNGFILLNQSLRFTPDKYFIPQLVEMWIFTFTVILPFMQAVF 608
                 79****************************************66******************************************************* PP

        HbrB 102 LPLetefklssllaeskekrsaspasqasssssstssssksserldvrrllLiaFRDsvvlPiyerlk 169
                 LPL++e +     +++++                +++s+ ++ +l+vr+++L+++RD v+lP++e+lk
  KHJ34261.1 609 LPLDLEIS-----KNTSK----------------NQNSNGNQGDLNVRSMVLRSYRDIVILPRFEKLK 655
                 *******9.....22222................223445789**********************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (830 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1063  (0.0592894); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.27s 00:00:00.94 Elapsed: 00:00:00.42
# Mc/sec: 5881.35
//
Query:       KHJ34262.1  [L=1079]
Description: putative vacuolar sorting protein 39 domain 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-32  109.5   0.3    1.4e-30  105.8   0.0    3.2  4  Vps39_1   Vacuolar sorting protein 39 domain 1
    1.8e-26   92.7   2.1    1.7e-25   89.6   0.0    3.2  3  Vps39_2   Vacuolar sorting protein 39 domain 2
    1.3e-20   74.1   0.0    3.4e-20   72.8   0.0    1.6  1  CNH       CNH domain
    0.00031   20.6   1.5    0.00031   20.6   1.5    3.0  4  Clathrin  Region in Clathrin and VPS
  ------ inclusion threshold ------
       0.11   12.5   0.0         12    6.0   0.0    2.8  2  BBS2_Mid  Ciliary BBSome complex subunit 2, middle region


Domain annotation for each model (and alignments):
>> Vps39_1  Vacuolar sorting protein 39 domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.5       1.4   4.9e+03      43      98 ..     365     421 ..     357     426 .. 0.59
   2 !  105.8   0.0   3.8e-34   1.4e-30       1     108 []     618     724 ..     618     724 .. 0.99
   3 ?   -3.6   0.0       3.8   1.4e+04      80      96 ..     745     761 ..     738     769 .. 0.70
   4 ?   -2.2   0.0       1.4     5e+03      51      63 ..     848     860 ..     838     884 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.4
     Vps39_1  43 keLidlYygkklheeALeLlkelade...deedeedsslkgeketiiqylqklseedld 98 
                 ++ id   ++++  eA+ +l+ l d+   +++++  + + +++++   +++k+ ++  d
  KHJ34262.1 365 HSQIDELTQNEEYDEAISILNMLEDAlfyEKTERLREIKIQKAQQ--LFDKKMYQNAMD 421
                 555566677888888888888888877653333333333333333..366666555555 PP

  == domain 2  score: 105.8 bits;  conditional E-value: 3.8e-34
     Vps39_1   1 iDTaLlkvYlktkpklvgpLlrleNaCdlkdveeiLkkekkykeLidlYygkklheeALeLlkeladedeedeedsslkgeketiiqylqklseedldl 99 
                 iDT+L++ Yl ++p+l+g L+r++N+Cd+++v+ +L k+ +y++L+d++ygkklh+ ALeLlk++  ++e+d+    l+g+ +t i ylq+l +e++dl
  KHJ34262.1 618 IDTTLFRSYLLVRPQLAGALFRIPNYCDPDVVNDNLLKSGRYNDLVDFFYGKKLHRPALELLKRFGMSTENDDVSVVLQGPRRT-IGYLQNLPPEMIDL 715
                 8******************************************************************9****************.************** PP

     Vps39_1 100 ileyskwvl 108
                 ile+++w+l
  KHJ34262.1 716 ILEFAEWPL 724
                 *******97 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 3.8
     Vps39_1  80 geketiiqylqklseed 96 
                  + +t++++lq+++e+ 
  KHJ34262.1 745 LPRKTVLNFLQSIDEKL 761
                 46678999999998765 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 1.4
     Vps39_1  51 gkklheeALeLlk 63 
                 + ++h++ALe+ +
  KHJ34262.1 848 NMGQHRKALEIYV 860
                 5689999999875 PP

>> Vps39_2  Vacuolar sorting protein 39 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.1      0.18   6.4e+02      31      77 ..     494     541 ..     485     544 .. 0.83
   2 ?   -2.9   0.0       2.5     9e+03      23      59 ..     779     815 ..     770     827 .. 0.67
   3 !   89.6   0.0   4.8e-29   1.7e-25       1     108 [.     934    1063 ..     934    1064 .. 0.98

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.18
     Vps39_2  31 sflekalrnslekkreeqvvkklrkaeklsveee.llklrskkvvvte 77 
                 ++ +k +rn+l+ ++ ++ +k++++ ++++v  +  ++ r+++v+++ 
  KHJ34262.1 494 KVVNKIFRNHLKSASDTSSIKSFKRIDSEEVSDAaSITGRQNRVKMEA 541
                 5678999********************999976516799999999986 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.5
     Vps39_2  23 elplkdlesflekalrnslekkreeqvvkklrkaekl 59 
                 e   + le +l++ + +   k+++++  + l k +kl
  KHJ34262.1 779 EFHNRLLETYLRELIGEDKDKRNTKEWKNLLIKLTKL 815
                 5555678999999998877777777665555555544 PP

  == domain 3  score: 89.6 bits;  conditional E-value: 4.8e-29
     Vps39_2    1 lelLskhaerldplevLdllPdelplkdlesflekalrnslekkreeqvvkklrkaeklsveeell......................klrskkvvv 75  
                  l+lLs+h+ rl+++++L l+Pd++++++les+++++++++++k +e++ v++l k+e  + + +ll                      ++r+++v+v
  KHJ34262.1  934 LRLLSNHGFRLPASSTLSLIPDSVSVTSLESYFRGQIQAANSKVNESRAVAGLHKSEVVNEQARLLlgenwsisalkneialpgshspGCRNRRVIV 1030
                  789************************************************************999******************************* PP

     Vps39_2   76 teekvCavCkkrlgesvfvvyPngsvvHlgCak 108 
                  +e++vC+ C+krl++sv+ v+Pn+ v H+gC +
  KHJ34262.1 1031 SEDRVCPACHKRLANSVITVMPNDAVLHYGCLN 1063
                  *******************************87 PP

>> CNH  CNH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.8   0.0   9.4e-24   3.4e-20      32     272 ..      78     333 ..      67     335 .. 0.85

  Alignments for each domain:
  == domain 1  score: 72.8 bits;  conditional E-value: 9.4e-24
         CNH  32 ieklss...vtqlaVleelnlllllsdkqLyvydlsaLeekeeesqlakkksenltqklpetkgchffa.........irngyskekfLvvavkskivl 118
                 iek  s   + qla+++e n+l++ls++++  +dl + + +e               +l++tkg+++fa         +    +   +L+v vk+++++
  KHJ34262.1  78 IEKF-StkaIEQLAIIKESNILISLSNACISIHDLHSFTLQE---------------QLTKTKGVTSFAttsniikdaAMGIPEIISRLAVCVKRRLLV 160
                 3333.3477*********************************...............6777777777777766622223333455689*********** PP

         CNH 119 lewneplkkfkkklrefqvpaevfsisvl.kpklcvgvakgFelvnldegaaeslldpednsldfaarkenlkplaviqis.................e 199
                   w e+ +++ +++ e+ +++++  +++   +k++ g ++gF +v++ ++++ +++       +++++   +  ++   i                  +
  KHJ34262.1 161 WSWHES-EME-QDIIEIMLSEPIRVLQWAeATKVICGLNSGFVIVDIITKSVDDVTGYTTMGSSTVNSGGRFGSVGTASIGymglkgysskpliaklvD 257
                 *****6.788.9*****************99*****************999988886666666667778888888888887788888888888877778 PP

         CNH 200 defLlcydefavyvdlqGrrsrdseleWegkPesvaclepyllafhk..nf.ieirsvetgelvqeisgkklrfll 272
                 d++Ll+ d+   + +++G+  ++ ++ W+++Pe++ +++py+la ++  n+ +e+r+ et  l+q+i++++++ l+
  KHJ34262.1 258 DKLLLTKDTNSLFITSEGKSLEKEQIPWQQVPEAIGYSYPYILALQSptNGtLEVRNPETLSLLQSITLQNAKQLH 333
                 9********************************************9766445*******************98776 PP

>> Clathrin  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1       1.9   6.9e+03     101     138 ..      70     108 ..      63     110 .. 0.75
   2 ?   -1.0   0.1      0.42   1.5e+03      94     108 ..     372     386 ..     361     427 .. 0.60
   3 !   20.6   1.5   8.7e-08   0.00031      16     122 ..     752     876 ..     741     882 .. 0.89
   4 ?   -3.0   0.0       1.7   6.2e+03      89     102 ..    1055    1068 ..    1052    1072 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.9
                 SHSSXSSSSHCSCHHH.HTTTTTXXSHHHHHHHHHHHSS CS
    Clathrin 101 kaisllkklkdfddai.eyaakvsnpelwekllealldk 138
                 kai+llk+ + f  ++ e +a ++ ++++  l +a++++
  KHJ34262.1  70 KAIDLLKEIEKFSTKAiEQLAIIKESNILISLSNACISI 108
                 789998888888777668888888888888888888765 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.42
                 HTTXTHSSHSSXSSS CS
    Clathrin  94 kkinefkkaisllkk 108
                 + ++e+++ais+l+ 
  KHJ34262.1 372 TQNEEYDEAISILNM 386
                 334444444442222 PP

  == domain 3  score: 20.6 bits;  conditional E-value: 8.7e-08
                 HHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHT...............T-HHHHHHTTSS---S-TTHHHHHHHT-S..SHHHHHHHHHTTX CS
    Clathrin  16 lfeeaglleelleyLekvlkedskenpalqtallelyaky...............ddpqeleeflkknnnydlekvaklcekad..lyeeavilykkin 97 
                 +f +    ++++ yLe +++e    +p+++++lle+y+++               + + +l + +k++++y l k+ +l  k d   ye  v+++++++
  KHJ34262.1 752 NFLQSIDEKLATRYLEHIISELGDLTPEFHNRLLETYLREligedkdkrntkewkNLLIKLTKLMKTSSQYSLGKAFNLIPKDDpdFYEAEVVVLSNMG 850
                 5555556678999******9888889****************************97789*********************6666559************ PP

                 THSSHSSX.SSSSHCSCHHHHTTTTT CS
    Clathrin  98 efkkaisl.lkklkdfddaieyaakv 122
                 ++ ka+++ + k kdf++a ey+ +v
  KHJ34262.1 851 QHRKALEIyVFKTKDFKRAEEYCNNV 876
                 *******999999*******998775 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 1.7
                  HHHHHHTTXTHSSH CS
    Clathrin   89 avilykkinefkka 102 
                  av++y ++n++k +
  KHJ34262.1 1055 AVLHYGCLNKWKAV 1068
                  899********976 PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.0     0.026        95      49      68 ..      28      47 ..       9      55 .. 0.80
   2 ?    6.0   0.0    0.0033        12      26      66 ..      68     110 ..      62     132 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.026
    BBS2_Mid 49 ekerfayaleNGtvgvyekk 68
                +++r++++l+NG + +y+ +
  KHJ34262.1 28 HGDRLMVGLNNGNLRIYRVN 47
                56799************876 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0033
    BBS2_Mid  26 vfkeeelvaeite..tekvvslarlekerfayaleNGtvgvye 66 
                 vfk  +l++ei++  t+++ +la +++++++++l+N  + +++
  KHJ34262.1  68 VFKAIDLLKEIEKfsTKAIEQLAIIKESNILISLSNACISIHD 110
                 7888899998875337899*********************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1079 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1023  (0.0570584); expected 358.6 (0.02)
Passed bias filter:                      651  (0.0363099); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.78u 0.24s 00:00:01.02 Elapsed: 00:00:00.41
# Mc/sec: 7975.49
//
Query:       KHJ34263.1  [L=321]
Description: putative \x09 ubiquinol cytochrome-c reductase assembly protein cbp3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.8e-33  113.5   0.2    1.1e-32  113.0   0.2    1.2  1  Ubiq_cyt_C_chap  Ubiquinol-cytochrome C chaperone


Domain annotation for each model (and alignments):
>> Ubiq_cyt_C_chap  Ubiquinol-cytochrome C chaperone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.0   0.2   6.4e-37   1.1e-32       2     129 ..     154     284 ..     153     288 .. 0.96

  Alignments for each domain:
  == domain 1  score: 113.0 bits;  conditional E-value: 6.4e-37
  Ubiq_cyt_C_chap   2 elgvpdtfagrfqllvlhtwlllrRlkaegpeg.reieqelldkffedvdeklreegvgdlsv..pkrmkklaeafygrllaydealgsddaaL 92 
                      e+g p tf+++ q+++lh++l ++R++  +p++ + +++++ d+ff  +++++   + +  +v   k++k+l  +++g+++ayde+l ++da+L
       KHJ34263.1 154 EFGFPATFSTWSQVTMLHMYLYTVRIRNAPPDQvKIWQRCIQDQFFYAAEDRMVVNHNMSAGVirSKYLKDLYVQWRGLIAAYDEGLAKGDAVL 247
                      79****************************655488999******************************************************* PP

  Ubiq_cyt_C_chap  93 aaalwrnvykaslevdleklaglvgyvraqlatlsal 129
                      aaa+wrn+yka+++ d++ la++v yvr  l+ l++l
       KHJ34263.1 248 AAAIWRNIYKAREDFDIRDLAQIVSYVRHSLQKLENL 284
                      *********************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       682  (0.0380389); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2287.03
//
Query:       KHJ34264.1  [L=122]
Description: putative gon7 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.4e-08   32.3   0.9    1.2e-07   31.8   0.9    1.3  1  Gon7      Gon7 family
  ------ inclusion threshold ------
      0.062   13.7   0.5      0.079   13.3   0.5    1.3  1  LPP20     LPP20 lipoprotein


Domain annotation for each model (and alignments):
>> Gon7  Gon7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.9   1.3e-11   1.2e-07      51      96 ..      44      89 ..       6     101 .. 0.74

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 1.3e-11
        Gon7 51 epkkeadaelteLseLRaqltgLQddiNefLTermeeakkkkkkvd 96
                +++  +d++  +Ls+L+ +++++Q++iN+ LT+rme++ + + +v+
  KHJ34264.1 44 DTNPSSDEKKIYLSALKKAIAQMQEQINIQLTNRMENDAATSIQVA 89
                34444447779**************************998887776 PP

>> LPP20  LPP20 lipoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.5   8.8e-06     0.079      24      79 ..      41     107 ..       7     118 .. 0.75

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 8.8e-06
       LPP20  24 l..............raAkqnAlrdiaeqiqvqvksssstqetsaavqnsettnesvsqvvesvlrgiei 79 
                 l               +A ++A++++ eqi++q  +  ++    aa++++++ ++ ++ + e ++ g+e 
  KHJ34264.1  41 LsldtnpssdekkiyLSALKKAIAQMQEQINIQLTNRMEN---DAATSIQVAPEDVYQPTNEIYIPGYEC 107
                 4445555555544557889999999999999998444444...389*******************98885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1151  (0.0641977); expected 358.6 (0.02)
Passed bias filter:                      659  (0.0367561); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 972.29
//
Query:       KHJ34265.1  [L=77]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       263  (0.014669); expected 358.6 (0.02)
Passed bias filter:                      249  (0.0138881); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 590.19
//
Query:       KHJ34266.1  [L=323]
Description: hypothetical protein EV44_g2543 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.6e-05   24.4   0.1      0.035   14.4   0.0    2.5  2  Myb_DNA-bind_6   Myb-like DNA-binding domain
    0.00034   20.8   0.7      0.028   14.6   0.3    2.5  2  Myb_DNA-binding  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   3.9e-06     0.035       1      50 [.      50      96 ..      50     110 .. 0.79
   2 !    7.6   0.0   0.00051       4.5       7      41 ..     208     244 ..     203     261 .. 0.79

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.9e-06
  Myb_DNA-bind_6  1 WteeEdeiLlklvekygndWknIaealnrRtpkqcfdrwknkLrpkisrk 50
                    W++eE+  Ll+   +    +++Ia++l+ +t ++c+ +++  L++  +rk
      KHJ34266.1 50 WSKEEEVYLLQARLQK-IPYRHIATHLK-KTELACRLHYHH-LSHGNRRK 96
                    9999999999987765.579********.***********9.75433333 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00051
  Myb_DNA-bind_6   7 eiLlklveky.gndWknIaealn.rRtpkqcfdrwkn 41 
                     e+L +++ek+ ++ W+ Ia++++   +p+ +   wk+
      KHJ34266.1 208 ERLSQIYEKHrTSFWNIIASEYGpGSSPLLLEKVWKR 244
                     789*******4468*******9646666777776766 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.3   3.1e-06     0.028       3      43 ..      49      87 ..      48      89 .. 0.88
   2 !    3.8   0.0    0.0073        65      10      32 ..     208     232 ..     207     248 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 3.1e-06
                     SSBHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHH CS
  Myb_DNA-binding  3 kWteeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwr 43
                     +W++eE+  Ll+a  ++   ++ Ia +l  +te +cr++++
       KHJ34266.1 49 AWSKEEEVYLLQAR-LQKIPYRHIATHL-KKTELACRLHYH 87
                     7***********96.44566********.7*********97 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.0073
                      HHHHHHHHHHTTC.HHHHHHHHT.S CS
  Myb_DNA-binding  10 elLleavkkhGnr.WkkIaerlg.g 32 
                      e+L +  +kh  + W+ Ia+++g g
       KHJ34266.1 208 ERLSQIYEKHRTSfWNIIASEYGpG 232
                      789999*****777****9998854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (323 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       587  (0.0327403); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2421.57
//
Query:       KHJ34267.1  [L=708]
Description: putative ercc4 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.1e-21   75.8   4.6    4.7e-21   75.6   3.1    2.0  1  ERCC4        ERCC4 domain
  ------ inclusion threshold ------
       0.42   10.9   3.8       0.63   10.3   0.0    2.6  2  Calpain_III  Calpain large subunit, domain III


Domain annotation for each model (and alignments):
>> ERCC4  ERCC4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.6   3.1   5.2e-25   4.7e-21      30     155 ..     427     589 ..     369     590 .. 0.93

  Alignments for each domain:
  == domain 1  score: 75.6 bits;  conditional E-value: 5.2e-25
                 SSE.EE...CTT.......................EEEEEEEHHHHHHHHCCSHHHHHHHHHHH..H-SEEEEEEES-GGGTT................ CS
       ERCC4  30 gdyilwrrkvkaeynleldieepceek........vlverksaddlvasikdgrleeqvsrlkr.ngykkpillvegldqykrknknsrnkqykakvrq 119
                 +++i+wrrkv+ae++l   +++p +e         ++v  +++ +l+  ++  +l  ++ +l    + +k+i+l+egl++++ knk+ r k+++++vr 
  KHJ34267.1 427 NNIIKWRRKVQAEWDLVDNHWKPVDERiedekhvlYAVKCQELIELIGGLEGHDLNAFLLKLTMkFNDCKIIFLIEGLKSWLSKNKAIRDKDFTNNVRN 525
                 35599***************************99999999999999999999**********88667789***************************** PP

                 ............................THHH.HHHHHHHHHHHHS-EEEEESSHHHHHHHHHH CS
       ERCC4 120 ............................inrktiesaLvqlqldfgvsilttesanetaewlan 155
                                             +++++ie+ L+ l + ++v i++t+++ etaew+ +
  KHJ34267.1 526 qilnngepssqstnprkqrtkqshqsvyVDKNKIEDTLLRLHVAHNVLIHHTNNPHETAEWIMR 589
                 *************99999999999999999999****************************976 PP

>> Calpain_III  Calpain large subunit, domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   1.8      0.18   1.6e+03      39     104 ..     271     339 ..     259     352 .. 0.63
   2 ?   10.3   0.0     7e-05      0.63      83     135 ..     538     590 ..     493     594 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.18
  Calpain_III  39 ekkctvlvslmqknrrkerkkgeelltigfavykv...eeeeenrklrkeffaknqevarsstfinsre 104
                  +kk +   s + k ++k+r+k+ + l++g +   v   ++ ++n + +++ ++kn+e++++++  ++r+
   KHJ34267.1 271 KKKGKAKHSCLSKASNKSRRKKVTSLDMGRENGDVtisKSGSANLHAKEDAIKKNEEKLKQKEERRKRK 339
                  333333344444444444555566677766555555556888889999999999988888777666654 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 7e-05
  Calpain_III  83 rkeffaknqevarsstfinsrevvkrf.klppGeYvivPstfepneegeFlLrv 135
                  ++   ++++++ ++s ++++ ++   + +l+  + v++ +t +p+e++e+++r+
   KHJ34267.1 538 TNPR-KQRTKQSHQSVYVDKNKIEDTLlRLHVAHNVLIHHTNNPHETAEWIMRF 590
                  3222.34455677778988888855444************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (708 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2365  (0.131909); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.74u 0.30s 00:00:01.04 Elapsed: 00:00:00.46
# Mc/sec: 4673.22
//
Query:       KHJ34268.1  [L=229]
Description: hypothetical protein EV44_g5309 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.048   12.7   0.2      0.048   12.7   0.2    1.5  2  Tmemb_55A  Transmembrane protein 55A
        3.4    7.6   9.9         13    5.8   0.5    3.3  3  DUF35_N    Rubredoxin-like zinc ribbon domain (DUF35_N)


Domain annotation for each model (and alignments):
>> Tmemb_55A  Transmembrane protein 55A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.1      0.25   2.2e+03     164     175 ..      37      48 ..      25      50 .. 0.75
   2 ?   12.7   0.2   5.4e-06     0.048     136     174 ..      79     121 ..      58     126 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.25
   Tmemb_55A 164 srtlarCPhCrk 175
                 ++t  rC  Cr+
  KHJ34268.1  37 NKTFKRCNDCRR 48 
                 478889999986 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 5.4e-06
   Tmemb_55A 136 gpvspelqpvgvrviCghCkntflftel...s.rtlarCPhCr 174
                 + ++ +   + + v Cg Ck+t  ++ l   s ++ a+C +Cr
  KHJ34268.1  79 SDTTMNAVTEIATVLCGKCKKTARWNYLptaSnSSYAKCLNCR 121
                 2334444677889*********99986522234789******9 PP

>> DUF35_N  Rubredoxin-like zinc ribbon domain (DUF35_N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.5    0.0014        13      12      26 ..      41      55 ..      39      63 .. 0.85
   2 ?    4.9   0.0    0.0027        24      12      26 ..      95     109 ..      93     110 .. 0.91
   3 ?    1.2   1.0      0.04   3.5e+02      12      25 ..     115     128 ..     114     131 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0014
     DUF35_N 12 qrCpdCGtvqfPPra 26
                 rC dC +  f +r+
  KHJ34268.1 41 KRCNDCRRRDFDRRH 55
                6*******9999986 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0027
     DUF35_N  12 qrCpdCGtvqfPPra 26 
                 ++C+++ ++ + P+a
  KHJ34268.1  95 GKCKKTARWNYLPTA 109
                 69**********997 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.04
     DUF35_N  12 qrCpdCGtvqfPPr 25 
                  +C +C t  + +r
  KHJ34268.1 115 AKCLNCRTRDYFRR 128
                 68999999888777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1745.34
//
Query:       KHJ34269.1  [L=145]
Description: putative transcriptional factor b3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       450  (0.025099); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1068.36
//
Query:       KHJ34270.1  [L=240]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        3.2    8.2   8.3        4.5    7.7   0.3    2.5  2  eIF3g     Eukaryotic translation initiation factor 3 subunit 


Domain annotation for each model (and alignments):
>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.3   0.00025       4.5      98     120 ..     102     123 ..      90     127 .. 0.81
   2 ?    2.9   2.9    0.0076   1.4e+02     104     114 ..     144     154 ..     131     164 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00025
       eIF3g  98 kkkekklvkCriCkgdHfTskCP 120
                 k k++ l  C+ C+g+H T +C 
  KHJ34270.1 102 K-KQQPLEFCKRCNGHHPTKNCS 123
                 4.3466789*************5 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.0076
       eIF3g 104 lvkCriCkgdH 114
                   kCr+C+g H
  KHJ34270.1 144 STKCRNCGGPH 154
                 479******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1762.82
//
Query:       KHJ34271.1  [L=99]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.032   14.1   2.2      0.052   13.4   2.2    1.4  1  zf-CCHC_6  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   2.2   2.9e-06     0.052       3      19 ..       5      20 ..       3      36 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.9e-06
   zf-CCHC_6  3 KCknCGAFGHtarSkrC 19
                KC+nCG   H+a S+rC
  KHJ34271.1  5 KCRNCGG-PHRADSRRC 20
                9*****9.5******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       981  (0.0547158); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 735.25
//
Query:       KHJ34272.1  [L=818]
Description: putative 3 5 -cyclic nucleotide phosphodiesterase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-67  225.5   0.0    1.4e-66  224.7   0.0    1.4  1  PDEase_I  3'5'-cyclic nucleotide phosphodiesterase


Domain annotation for each model (and alignments):
>> PDEase_I  3'5'-cyclic nucleotide phosphodiesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.7   0.0   7.6e-71   1.4e-66       1     237 [.     383     639 ..     383     640 .. 0.89

  Alignments for each domain:
  == domain 1  score: 224.7 bits;  conditional E-value: 7.6e-71
                 SSSHHHHHHHHHHHHHHHHCCHCCCC..................S-HHHHHHHHHHHHHTTTT--S--HHHHHHCT-HHHHHCCCSSHHHHHHHHHHHH CS
    PDEase_I   1 YHNfrHAadVlqalfyllkkeklkee..................ltpleilalliaalcHDvdHpGtnNsFlvnskselailYndesvLEnhHlalafq 81 
                 YHNfrH +dVlqa+f++l k +  +                   ++p ++l+lli a++HDv+HpG+nN+Fl+  +++la+lYnd+svLE++H+a++ q
  KHJ34272.1 383 YHNFRHVVDVLQACFIFLIKLGRIPPfpdmkielssqsstlaetIRPYDALTLLITAIGHDVGHPGVNNAFLTSLNAPLAQLYNDRSVLESFHCAAYSQ 481
                 ******************8776665579999******************************************************************** PP

                 HHTSGGG-TTTTS-HHHHHHHHHHHHHHHHTTSGGGHHHHHHHHHHHCCTTS-TTTCT.......-HHHHHHHHHHHHHHHHTGCCCS-HHHHHHHHHH CS
    PDEase_I  82 llkkeecnifknlskeeykelrkliielIlaTdmakhfelleklkelvkkkeknslnke......eeedkklllsllikaaDisnptkpweiskkwael 174
                 +l+ +  + f++       e+r+l+i+ IlaTdm  hfe+++kl ++++     +++ e        e ++l+++llik+aDisn+++++e+++ w+ +
  KHJ34272.1 482 ILRCHWPSAFRSA------EMRQLMISTILATDMGLHFEYMKKLARVKEDIISANTSAEnstqwsPGELRTLACALLIKCADISNVARNFEVASSWTLI 574
                 **77755555555......9************************76666444433333356666667777799************************** PP

                 HHHHHHHHHHHHHHCT----...GGGTSSC...HHHHHHHHHHTHHHHHHHHHHC-GGGHHHHHHH CS
    PDEase_I 175 vleEffeqgdeekelglpvs...plmdrektslaksqigFidfvvkplfealakllpelkelldel 237
                 +++Ef +q  +ek +g+p +   p   re t+l ksqigFi+ ++ plf+ +a+++p ++ +++el
  KHJ34272.1 575 LTDEFSRQATMEKDMGIPSVlfaP-PVREITTLGKSQIGFIETFAYPLFDGIAEVMPAMTFCVEEL 639
                 *******************98843.444446899***************************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (818 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.24s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 5592.26
//
Query:       KHJ34273.1  [L=589]
Description: putative phosphorus acquisition-controlling protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-12   46.3   2.3    9.8e-12   44.7   2.3    2.0  1  HLH       Helix-loop-helix DNA-binding domain


Domain annotation for each model (and alignments):
>> HLH  Helix-loop-helix DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   2.3   5.4e-16   9.8e-12       1      53 []     494     570 ..     494     570 .. 0.95

  Alignments for each domain:
  == domain 1  score: 44.7 bits;  conditional E-value: 5.4e-16
                 HHHHHHHHHHHHHHHHHHHHHHHHHCST........................CSTTSS-STHHHHHHHHHHHHHHHH CS
         HLH   1 rraahnerErrRRdriNsaleeLrellP........................slppskKlsKaeiLekAveYIkhLq 53 
                 +r++h+++E+ RR+r+Nsal+e  +llP                        ++ ++  +sKa ++e+A+ YI+hL+
  KHJ34273.1 494 KRTSHKIAEQGRRNRMNSALQEMASLLPydqnknrrceknkngetvgseksiKGISQNMNSKARTVERAISYIRHLK 570
                 79******************************************999999987778889****************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (589 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       742  (0.0413855); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 3967.09
//
Query:       KHJ34274.1  [L=435]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       499  (0.027832); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3140.48
//
Query:       KHJ34275.1  [L=757]
Description: putative nima interactive protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.6e-29  100.4   6.7    9.6e-29  100.4   6.7    2.7  3  ADIP          Afadin- and alpha -actinin-Binding
  ------ inclusion threshold ------
       0.07   13.6   0.2       0.07   13.6   0.2    4.3  4  ZapB          Cell division protein ZapB
      0.092   12.9   4.8       0.19   11.9   1.0    2.8  2  DMPK_coil     DMPK coiled coil domain like
       0.74   10.1   5.2        0.5   10.6   1.4    2.7  2  Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
        6.1    7.4   8.9       0.42   11.1   1.4    2.7  2  APG6_N        Apg6 coiled-coil region


Domain annotation for each model (and alignments):
>> ADIP  Afadin- and alpha -actinin-Binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.4   6.7   2.7e-32   9.6e-29       2     151 ..      11     161 ..      10     162 .. 0.96
   2 ?   -3.3   0.2       2.5   8.8e+03      54      69 ..     517     532 ..     500     549 .. 0.50
   3 ?   -2.8   0.3       1.7     6e+03      81     102 ..     646     667 ..     614     695 .. 0.57

  Alignments for each domain:
  == domain 1  score: 100.4 bits;  conditional E-value: 2.7e-32
        ADIP   2 naikyINstLlsrGylrskllfdta.tekveeniaaiinviysLlqardrdleqreslnetirkleaeierlqskierlktqleqlerelalvqakerq 99 
                 +a++y+N++LlsrG+lr ++++++a  ++   +  +ii ++++L+  +drd+ qres+ +t+r l+a++++l+ ++er k++  + +r++a+ +a++++
  KHJ34275.1  11 TASQYLNNQLLSRGFLRHGQNINFAqRGNEHCSQIQIIRLVHDLILHHDRDATQRESMVDTVRALRADSAKLSVEVERYKDRENDVRRKMAAIEAEKTT 109
                 699**********************556666677789************************************************************** PP

        ADIP 100 lekklktleqklknekeelqrlknalqqiktqyahelkkkdreiekLkeklk 151
                  e +l   e+  +++k e+++lk ++ q++t +a + +k+d+ ++ Lk+ ++
  KHJ34275.1 110 FESRLGISEANERRLKLEVEKLKATVGQVRTMCAIDCRKRDKIMDGLKKTIS 161
                 ************************************************9875 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.5
        ADIP  54 qreslnetirkleaei 69 
                  +++  ++++++++e 
  KHJ34275.1 517 DQNEILDKNSTNRSET 532
                 2222223333333332 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 1.7
        ADIP  81 tqleqlerelalvqakerqlek 102
                 ++++ +ere+ ++   e+ ++ 
  KHJ34275.1 646 NNSKLQERECRSSSTVEAAMNS 667
                 3344444444444444444444 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.2     2e-05      0.07      14      62 ..      66     114 ..      63     115 .. 0.96
   2 ?   -1.7   0.1       1.2   4.2e+03      22      34 ..     123     135 ..     119     141 .. 0.70
   3 ?    3.1   0.7     0.036   1.3e+02      32      65 ..     205     238 ..     197     276 .. 0.51
   4 ?   -3.3   0.1       3.6   1.3e+04      30      56 ..     507     533 ..     502     537 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2e-05
        ZapB  14 qkaidtitlLqmeieeLkeeneelkeenreleeeneqlkeereawqerl 62 
                 ++++dt+++L+   ++L  e+e +k++ + ++++  + ++e++ +++rl
  KHJ34275.1  66 ESMVDTVRALRADSAKLSVEVERYKDRENDVRRKMAAIEAEKTTFESRL 114
                 589*******************************************998 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.2
        ZapB  22 lLqmeieeLkeen 34 
                 +L+ e+e+Lk+ +
  KHJ34275.1 123 RLKLEVEKLKATV 135
                 6777888887765 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.036
        ZapB  32 eeneelkeenreleeeneqlkeereawqerlkkL 65 
                 e ne l+e ++ l+e ne+l +   ++ + lk+L
  KHJ34275.1 205 ETNEFLTELAKSLSEDNENLSHLLWQTLDTLKNL 238
                 4455556666666666666553333333333332 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 3.6
        ZapB  30 Lkeeneelkeenreleeeneqlkeere 56 
                 L e  ++  + ++e+  +n+  + e +
  KHJ34275.1 507 LNETCNSNDSDQNEILDKNSTNRSETS 533
                 666667777778888888887777765 PP

>> DMPK_coil  DMPK coiled coil domain like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.0   5.3e-05      0.19      16      58 ..      96     138 ..      93     141 .. 0.89
   2 ?    1.2   0.2      0.11     4e+02      18      41 ..     630     657 ..     622     667 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 5.3e-05
   DMPK_coil  16 lqeeLekvkaanlafeskLkeaEkknreLeeeleqLkkemEel 58 
                 +++++ ++ a +  fes+L  +E+  r L+ e+e+Lk  + ++
  KHJ34275.1  96 VRRKMAAIEAEKTTFESRLGISEANERRLKLEVEKLKATVGQV 138
                 67889999****************************9877655 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.11
   DMPK_coil  18 eeLekvkaanlaf....eskLkeaEkkn 41 
                  +L++v+  n a+    +skL+e E ++
  KHJ34275.1 630 AKLKAVRYKNSAVtagnNSKLQERECRS 657
                 4566666555443222279******997 PP

>> Seryl_tRNA_N  Seryl-tRNA synthetase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.4   0.00014       0.5      23      90 ..      64     135 ..      45     143 .. 0.73
   2 ?   -1.8   0.1         1   3.6e+03      48      99 ..     202     226 ..     186     239 .. 0.53

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00014
                   CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTT...........S-TCCCCCCCHHHHHHHHHHHHHH CS
  Seryl_tRNA_N  23 edkadvdelleldekrrelqveleelqaerNelskeIgkakkkk...........edaeeliaevkelkeelkaleael 90 
                   + ++ vd++ +l +   +l ve+e  + + N + ++++ + ++k           ++        + lk e+++l+a++
    KHJ34275.1  64 QRESMVDTVRALRADSAKLSVEVERYKDRENDVRRKMAAIEAEKttfesrlgiseANE-------RRLKLEVEKLKATV 135
                   457889************************************9987754433333333.......33444444444444 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1
                   HHHHHHHHHHHCCCCCCTTS-TCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH CS
  Seryl_tRNA_N  48 lqaerNelskeIgkakkkkedaeeliaevkelkeelkaleaelkeleaelek 99 
                   l++e Ne   e +k   +                            +++l +
    KHJ34275.1 202 LRSETNEFLTELAKSLSE---------------------------DNENLSH 226
                   444444444444444433...........................3333333 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.4   0.00012      0.42      44     101 ..      70     131 ..      43     141 .. 0.78
   2 ?   -1.1   1.1      0.71   2.5e+03      61      77 ..     204     220 ..     184     304 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00012
      APG6_N  44 k....qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerf 101
                 +     + + ++l  e+e+ ++ e++  ++++++e+e+   e+ l   e+ +++l+ e e+ 
  KHJ34275.1  70 DtvraLRADSAKLSVEVERYKDRENDVRRKMAAIEAEKTTFESRLGISEANERRLKLEVEKL 131
                 04444566778888899999999999999999999999999999999999999998887765 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.71
      APG6_N  61 keeeelleeLkeleker 77 
                 +e +e l+eL++  +e+
  KHJ34275.1 204 SETNEFLTELAKSLSED 220
                 33333333333222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (757 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1232  (0.0687155); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 5148.34
//
Query:       KHJ34276.1  [L=1425]
Description: putative dual specificity protein kinase pom1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.6e-52  177.8   0.0    3.9e-52  177.2   0.0    1.3  1  Pkinase      Protein kinase domain
    2.6e-18   66.3   0.0    4.9e-18   65.3   0.0    1.4  1  Pkinase_Tyr  Protein tyrosine kinase
  ------ inclusion threshold ------
      0.056   13.4   0.0        0.1   12.5   0.0    1.3  1  APH          Phosphotransferase enzyme family
      0.073   12.7   0.1       0.17   11.5   0.1    1.6  1  RIO1         RIO1 family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.2   0.0   8.7e-56   3.9e-52       1     264 []     975    1271 ..     975    1271 .. 0.88

  Alignments for each domain:
  == domain 1  score: 177.2 bits;  conditional E-value: 8.7e-56
                  EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS......CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH. CS
     Pkinase    1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk......hpnivrlyevfeekdelylvleyveggeladlle. 90  
                  ye +  lG+GsfG+V+++++++tg  vAvK+i+++k+ +   +++l E++ilkkl+      + n +r+ ++f+  ++l++  e+++ + l +l++ 
  KHJ34276.1  975 YEIIDLLGKGSFGQVVRCIDHKTGGLVAVKIIRNKKRFH---QQALVEVNILKKLRewdpngSYNMIRFTQSFYFRQHLCISAELLDMN-LYELIKl 1067
                  788899***************************998887...568**********9887777889**********************77.9999996 PP

                  HHSS.--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTE..EEE-SGTTSEESSSSCSBCTTTSCGGGS-HHHHTTSCBSHHHHHHHHH CS
     Pkinase   91 rkgs.lseeeakkiakqilegleylHskgiiHrDlKpeNiLidekge..lKitDFGlakelessskltsfvgtseYlAPEvlkeneyskkvDvWslG 184 
                  ++   +s + +++++kqil++l  l ++++iH+DlKpeN+L+ +  +  +K++DFG ++  +++  + +++ ++ Y++PEv+ +  y+ ++D+WslG
  KHJ34276.1 1068 NSFRgFSLKIVRRFTKQILNSLLLLQQHKVIHCDLKPENVLLAHPLHteIKVIDFGSSCFENEK--VYTYIQSRFYRSPEVILGMTYGMPIDIWSLG 1162
                  33335**************************************744455*********988775..69***************************** PP

                  HHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT...SHH...HHHTTS....................................-HHHHHHHH CS
     Pkinase  185 vilyelltgkppfsgekgkekvekeldqlekilkilg...etkeklpeasei....................................seeakdllk 242 
                  +i++el++g p+f+ge+++e       ql  i++++g   +   +l  +s+                                     ++ ++d+++
  KHJ34276.1 1163 CIMAELYSGVPIFPGENEQE-------QLACIMEVFGppeK---HLIDKSTRrkvffdslgkprlalsskgrrrrpsskslhqalkcdDPAFLDFIS 1249
                  **************777766.......44446667774321...2222222234468999************************************* PP

                  HHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase  243 kllkkdpkkRltaeellqhpyl 264 
                  k+lk+dp +R+  e++++h+++
  KHJ34276.1 1250 KCLKWDPDRRMKPEDAIRHEFI 1271
                  *******************996 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.3   0.0   1.1e-21   4.9e-18       3     213 ..     977    1182 ..     975    1197 .. 0.84

  Alignments for each domain:
  == domain 1  score: 65.3 bits;  conditional E-value: 1.1e-21
                   EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-......BTTB--EEEEEESSSSEEEEEE--TTEBHHHHH CS
  Pkinase_Tyr    3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklk......hpnivkllgvctkeepllivteyvkgGdLlkfL 92  
                   + + lG+G+fG+Vv++  +    k+   VavK+++++++ +  ++ l e++i+kkl+        n+++++   + +++l+i  e+++  +L + +
   KHJ34276.1  977 IIDLLGKGSFGQVVRCIDH----KTGGLVAVKIIRNKKRFH--QQALVEVNILKKLRewdpngSYNMIRFTQSFYFRQHLCISAELLDM-NLYELI 1065
                   5678************999....8999*******7766655..788889*****9952333333589999999999999******9997.8***** PP

                   HHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEE..TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHH CS
  Pkinase_Tyr   93 rkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlse..nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsks 186 
                   + ++ + ++lk + +f+ q+ + +  L+++k++H dl   NvLl++  ++ +k+ DfG +    +++ y+  +    +  + +pE++  +++    
   KHJ34276.1 1066 KLNSFRGFSLKIVRRFTKQILNSLLLLQQHKVIHCDLKPENVLLAHplHTEIKVIDFGSSCFE-NEKVYTYIQ----SRFYRSPEVILGMTYGMPI 1156
                   ***9*****************************************966679*******87766.444443332....34588************** PP

                   HHHHHHHHHHHHHTTSSGTTTTSHHHH CS
  Pkinase_Tyr  187 DvWsfGvllwEiftlgespypglknee 213 
                   D+Ws G ++ E+++ g   +pg +++e
   KHJ34276.1 1157 DIWSLGCIMAELYS-GVPIFPGENEQE 1182
                   *************9.766666665555 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.3e-05       0.1     156     196 ..    1086    1125 ..    1041    1128 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.3e-05
                  HHHH--SSS-EEEE-SS-SGGGEEEC...TTEEEEE---TT- CS
         APH  156 laallpgelptvllHgDlhpgNllvd.pddgrvtGviDfeda 196 
                  l  ll+  +++ ++H+Dl+p N+l+  p ++++  viDf+ +
  KHJ34276.1 1086 LNSLLL-LQQHKVIHCDLKPENVLLAhPLHTEI-KVIDFGSS 1125
                  233333.68899**************9666666.69***976 PP

>> RIO1  RIO1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   3.8e-05      0.17      78     151 ..    1046    1124 ..    1004    1136 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.8e-05
                  EETT.EEEEE--EETTEEGGBHHHCG.-.HHHHHHHHHHHHHHHHHHHHTSTEEESS-STTSEEEETT...EEEE--GTT CS
        RIO1   78 lkrh.vlvmefigedgvaapklkdve.e.eeeaeelyeevleemrklykeaglvHaDLSeyNvlvded...kvviIDvsQ 151 
                  +++h ++  e+++ + +++ kl+  +    +  ++  +++l+    l+++++++H+DL   Nvl+ +    ++ +ID++ 
  KHJ34276.1 1046 FRQHlCISAELLDMNLYELIKLNSFRgFsLKIVRRFTKQILN-SLLLLQQHKVIHCDLKPENVLLAHPlhtEIKVIDFGS 1124
                  555523446788888899999999996435566777777777.678889**************99764334788899875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1425 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       602  (0.0335769); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.80u 0.25s 00:00:01.05 Elapsed: 00:00:00.43
# Mc/sec: 10010.36
//
Query:       KHJ34277.1  [L=508]
Description: putative peroxisomal pex24-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-60  205.6  12.0    1.8e-60  204.9  12.0    1.3  1  Pex24p    Integral peroxisomal membrane peroxin
  ------ inclusion threshold ------
      0.038   12.7   1.1       0.16   10.7   0.2    1.9  2  DUF2207   Predicted membrane protein (DUF2207)


Domain annotation for each model (and alignments):
>> Pex24p  Integral peroxisomal membrane peroxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.9  12.0     2e-64   1.8e-60       3     366 .]     129     495 ..     128     495 .. 0.84

  Alignments for each domain:
  == domain 1  score: 204.9 bits;  conditional E-value: 2e-64
      Pex24p   3 lsspllssnppqlssrLakifplllildkvlkiltWtnpdktlsfllvytficlvpylelvvlplllllfvvmvpaylyrhplrksslikkeesknest 101
                 ls++l+ssn++q+s r+++if l+    k+ k++ W++ ++t sfl +yt+icl p l+ v lpl+++l+  ++ +y +    ++s++i  + s+n   
  KHJ34277.1 129 LSLQLMSSNFRQFSTRIGAIFFLQ---RKLKKLIAWSSYTQTTSFLAMYTLICLEPKLISV-LPLVFTLLL-LTNSYSTH---NPSISIPAHRSENL-I 218
                 6899********************...*******************************999.999999888.33333333...22222222333333.3 PP

      Pex24p 102 segptldea........skeivlnLrdlqnkmedllnpidalekflkelagfkdenlstllfltllltpililllsrlipwrlillvlg.ailltyHps 191
                 s++p+l           sk++++n+rd+qn med+++ +d++++ + +l++f++e+ls+ +f++++l++++ l +++lipwrl++l+lg +i+ + Hp 
  KHJ34277.1 219 SDEPNLFVPsvkpikerSKDFFRNMRDIQNVMEDYSKFYDQITESITPLVNFSNEELSCSIFFFIFLASFFALSITHLIPWRLVMLLLGwIIICANHPF 317
                 33333332246666888********************************************************************************** PP

      Pex24p 192 vkkvllrllwrlkivrlvvkyltgkelkkakskekkeelikelekketadiildespetrkpkrftveifEnqrrwllgkgWtsslfsserydwtdetr 290
                 v++  l                 + ++     + kk     +l+++ ++ i + + +  +  ++++veifE+q  + +g +W  +l+s +++       
  KHJ34277.1 318 VSRISLV---------------ASRHFV----NHKK----DKLNSFLNKLIAMNKLSAPS--EILEVEIFEIQLLSSAG-EWVPFLYSRSPFLSSFG-T 389
                 **99999...............444444....1222....34455555555444333333..567***********777.********999865544.3 PP

      Pex24p 291 kalkespsgvdhledvkpPedWkWdekkkWrlDlepdewvk.........eeeekkGWvYd.......................dnkwkepstedslsk 357
                  ++ e+p+g++++edv pP++W+W e  kW+lD  + ewv+         e+e+++ WvYd                       +++ ++p++ +++++
  KHJ34277.1 390 DKGSEWPKGTHFMEDVRPPHGWEWTE-RKWTLDFLSYEWVQervitgvevEIEGER-WVYDlrceadmietnddkgkqilsltwEEEINNPTNLEKRRG 486
                 579999********************.9*********************9888887.***********************999999999********** PP

      Pex24p 358 etRRRrwiR 366
                  +RRRrw+R
  KHJ34277.1 487 PWRRRRWVR 495
                 ********9 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.02   1.8e+02     319     417 ..      97     193 ..      30     204 .. 0.59
   2 ?   10.7   0.2   1.8e-05      0.16     345     436 ..     234     320 ..     212     347 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.02
     DUF2207 319 EkalldlLfdkseegkslkeikkyakkskk......kakkfkkalkkwksavkkkergyfdkkgkkklkklsalglgliilglilillallllvlllvf 411
                  +++ld +  +se++  + +i  + ++ k+        + ++++++++   + +    +f +++ kkl  +s +     +l+++ ++ +   l+  +v+
  KHJ34277.1  97 AEKFLDRIA-DSEDQ--FYDIDPNESQGKDkarrflSLQLMSSNFRQFSTRIGA---IFFLQRKLKKLIAWSSYTQTTSFLAMYTLICLEPKLI--SVL 187
                 445555555.23333..3333333333333333555788888888888888888...5777777777777777777777777776665544433..222 PP

     DUF2207 412 llilll 417
                  l+++l
  KHJ34277.1 188 PLVFTL 193
                 222222 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 1.8e-05
     DUF2207 345 kskkkakkfkkalkkwksavkkkergyfdkkgkkklkklsalglgliilglilillallllvlllvfllilllillliaiivlllfsrllgr 436
                 +   + k f ++++++++ +++ +++++d+  ++++  +++ +  l + ++++i+la +++ + ++ l  + l+ ll+++i+++  + +++r
  KHJ34277.1 234 E---RSKDFFRNMRDIQNVMED-YSKFYDQITESITPLVNFSNEELSCSIFFFIFLASFFALS-ITHLIPWRLVMLLLGWIIICANHPFVSR 320
                 3...88999999*****98887.99******99999999999988888888888888777777.6666666666666666666665555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       854  (0.0476323); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.38
# Mc/sec: 4050.19
//
Query:       KHJ34278.1  [L=613]
Description: putative f-box domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.2e-23   81.7   0.2    1.4e-22   80.1   0.1    2.0  2  YccV-like        Hemimethylated DNA-binding protein YccV like
    2.4e-08   33.7   0.0    4.5e-08   32.8   0.0    1.5  1  Transglut_core2  Transglutaminase-like superfamily
    9.3e-08   31.9   1.8    3.2e-07   30.1   1.8    1.9  1  F-box-like       F-box-like
    1.2e-06   28.3   2.4      4e-06   26.5   2.4    2.0  1  F-box            F-box domain


Domain annotation for each model (and alignments):
>> YccV-like  Hemimethylated DNA-binding protein YccV like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       2.9   1.3e+04      43      73 ..     404     437 ..     383     453 .. 0.63
   2 !   80.1   0.1     3e-26   1.4e-22       1      97 [.     507     598 ..     507     599 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 2.9
   YccV-like  43 segrnqpfYhvlvdt...edsekvsvrYvaeenl 73 
                 +++ ++ +Y+ l  +    d++++ ++ v++ +l
  KHJ34278.1 404 TAELEKAHYSALWADflfADRSRLLTSGVQQSHL 437
                 3445678888884444445555555555555555 PP

  == domain 2  score: 80.1 bits;  conditional E-value: 3e-26
   YccV-like   1 vkyrvGqvvrhkrygyrGVivgwdeecaaseewiekigveelsegrnqpfYhvlvdtedsekvsvrYvaeenlelikssep..iehpeigkyFkrfdga 97 
                 v+y++Gqv+rhkry y+GVi+gwd e + +++w   +  ++l +g  q+fY+vl  +ed+   s+rYvaeen+e+ k++ p  +++  +gkyF+r+dg+
  KHJ34278.1 507 VRYKIGQVFRHKRYYYTGVIIGWDLEGE-NFDWAFTNDARSLLFGMYQSFYNVL--VEDT---SIRYVAEENIEILKPEFPssLMSL-AGKYFNRWDGE 598
                 68*************************9.89***9999999*************..8899...799***********9887856665.*********86 PP

>> Transglut_core2  Transglutaminase-like superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.0     1e-11   4.5e-08       5     154 ..     204     372 ..     200     373 .. 0.85

  Alignments for each domain:
  == domain 1  score: 32.8 bits;  conditional E-value: 1e-11
  Transglut_core2   5 aeLdalaaevrae...lsseraaaekleaLnellyeelgFagned..dyydprnslldqVLerrr..GiPislsvvylevArrlglplegvgfP 91 
                       + d++a+++r e   +++  +++ k++aL +++ +++ F gn     y + ++ ++   L+  +   +P++   +++ ++rr++l+++++g+P
       KHJ34278.1 204 VMFDKIAQRFRCEylgIDNL-SPKAKAQALIDFM-RRHCFIGNLSswAYERIQSYFIGLYLQDPEcpPLPLISITIFCAIGRRINLDAHCCGIP 295
                      57799999999998875554.6778899****97.7999999987779**************9996678888899******************* PP

  Transglut_core2  92 ghflvrvg..........espege.........vliDPfnaGrllskedleellraalgaeaeltreflapasnrdvltRll 154
                        ++v v           +              +++DP++  r +  + l++ l++ +++  +l  ++l  +s+ ++++R+ 
       KHJ34278.1 296 DYLHVVVLprpgetldakK----LkdgetcgepMYLDPYQFMREVPIQILRKNLSNLGFQ-SSLHMRYLSDMSTASLVQRMS 372
                      *999998866777666662....0444466667*********************999888.9******************96 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   1.8   7.1e-11   3.2e-07       2      46 ..      17      61 ..      16      62 .. 0.87

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 7.1e-11
  F-box-like  2 srLPdEiLlqIFsyLppsd.LlrlalVCrrWrrvaldtplLWrrlv 46
                +rLPdE++ +I+ + +p d +l++ +VC r+ r+++  plLWr  +
  KHJ34278.1 17 LRLPDEVIQKILFFCDPDDvYLNVKRVCQRFFRLVNE-PLLWRFHC 61
                79**********99988876999***********975.5***9766 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   2.4     9e-10     4e-06       2      47 ..      15      61 ..      14      62 .. 0.96

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 9e-10
                HHHHS-HHHHHHHHHTS-HHH.HHHHCTT-HHHHHHHTTHHHHHHHH CS
       F-box  2 tlsrLPsevlrhILerLplsd.llalrrVSkgwrilidsdrlwcksi 47
                +l+rLP+ev+ +IL ++++ d +l+  rV+ ++ +l++++ lw+ ++
  KHJ34278.1 15 HLLRLPDEVIQKILFFCDPDDvYLNVKRVCQRFFRLVNEPLLWRFHC 61
                699****************************************9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (613 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4455.66
//
Query:       KHJ34279.1  [L=1250]
Description: putative nucleoporin pom152 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0013   18.8   0.0        1.1    9.3   0.0    4.0  4  I-set     Immunoglobulin I-set domain


Domain annotation for each model (and alignments):
>> I-set  Immunoglobulin I-set domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.0   0.0    0.0061   1.1e+02       2      35 ..     299     332 ..     298     350 .. 0.82
   2 ?   -2.5   0.0      0.31   5.5e+03      43      79 ..     698     735 ..     676     745 .. 0.62
   3 ?    0.5   0.0     0.035   6.3e+02      10      46 ..     873     909 ..     867     937 .. 0.75
   4 !    9.3   0.0   6.4e-05       1.1       9      75 ..    1167    1234 ..    1159    1240 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.0061
                 EEEES-CEEEEETTS-EEEEEEEECSSS-EEEEE CS
       I-set   2 kftqklkdvevseGesvelectveGepepsvsWa 35 
                 + ++k++ ++   G+  +l++++eG+p+++v  +
  KHJ34279.1 299 QASIKSSTLNKCAGDLSDLKIEIEGTPPLKVMYT 332
                 566777788888999***************9765 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.31
                 TSSSEEEEEET.TEEEEEESSB-GGGGEEEEEEEEETS CS
       I-set  43 ssqrvkvtvee.aeytLtIsnvevsDeGkYtckatnsa 79 
                 + +r k+t +e ++ t tI+    +  G+Yt+  t   
  KHJ34279.1 698 EGRRKKFTTSEiDSPTYTIKTDPLHKGGEYTLALTSVQ 735
                 44455555555555555555555555666665555444 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.035
                 EEEETTS-EEEEEEEECSSS-EEEEEETTCB-STSSS CS
       I-set  10 vevseGesvelectveGepepsvsWakdgselkssqr 46 
                  e+ eG+  +l+++  G+p+ +v+ +   ++++ s +
  KHJ34279.1 873 REICEGDIDTLQVKLIGSPPFNVKYQVLHKPIQGSGS 909
                 678899999**************99888888886544 PP

  == domain 4  score: 9.3 bits;  conditional E-value: 6.4e-05
                  EEEEETTS-EEEEEEEECSSS-EEEEEETTCB-STSSSEEEEEET.TEEEEEESSB-GGGGEEEEEEE CS
       I-set    9 dvevseGesvelectveGepepsvsWakdgselkssqrvkvtvee.aeytLtIsnvevsDeGkYtcka 75  
                  +v ++eG ++el  + +Gep+ +++ ++    +++ qr +v ++  +++t   + +++s+eG+Y++ a
  KHJ34279.1 1167 EVDIHEGAEAELLFEFWGEPPFEFTYTRSSLITHKGQRSHVLETRhETSTEYTKLIRSSQEGIYEVIA 1234
                  68899**********************999888888888777777577777888899********987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.79u 0.28s 00:00:01.07 Elapsed: 00:00:00.44
# Mc/sec: 8555.05
//
Query:       KHJ34280.1  [L=106]
Description: hypothetical protein EV44_g3154 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0092   15.7   0.9      0.013   15.2   0.9    1.3  1  DivIC         Septum formation initiator
  ------ inclusion threshold ------
       0.02   14.8   1.2       0.02   14.8   1.2    1.1  1  ExsD          Antiactivator protein ExsD
      0.092   12.8   5.0       0.22   11.6   4.8    1.6  2  ABC_tran_Xtn  ABC transporter


Domain annotation for each model (and alignments):
>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.9   2.2e-06     0.013      13      50 ..      15      52 ..       8      61 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 2.2e-06
                XXXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC- CS
       DivIC 13 kkgllaykqlkqeiaalqaelaklkaeneeLeaevkdL 50
                ++ + ++ q++q+++++ ++++++ka +++  +e k  
  KHJ34280.1 15 EQMYIQFVQMQQQLQQQARQIDEQKAFIKRISQETKSA 52
                66678888999999999999999999988888888876 PP

>> ExsD  Antiactivator protein ExsD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   1.2   3.4e-06      0.02     100     134 ..      19      54 ..      11      98 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 3.4e-06
        ExsD 100 ltlsvkveeLeiqinqleikkefWskla.Ekessqi 134
                  ++ +  ++L+ q +q++ +k f ++++ E++s++ 
  KHJ34280.1  19 IQFVQMQQQLQQQARQIDEQKAFIKRISqETKSANK 54 
                 455667789******************977777765 PP

>> ABC_tran_Xtn  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   4.8   3.6e-05      0.22      27      59 ..      22      54 ..      15      60 .. 0.84
   2 ?   -1.6   0.0      0.49   2.9e+03       8      17 ..      75      84 ..      64      90 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.6e-05
  ABC_tran_Xtn 27 eqqqkayekqqkeikkleefIerfrakakkakq 59
                   q q++ ++q ++i+++++fI+r +++ k a++
    KHJ34280.1 22 VQMQQQLQQQARQIDEQKAFIKRISQETKSANK 54
                  57899999*****************97777765 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.49
  ABC_tran_Xtn  8 lteYkGnYse 17
                  l+++kGn s 
    KHJ34280.1 75 LEKFKGNRSL 84
                  4566666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1906  (0.106308); expected 358.6 (0.02)
Passed bias filter:                      856  (0.0477439); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 772.53
//
Query:       KHJ34281.1  [L=969]
Description: putative rna-metabolising metallo-beta-lactamase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.9e-68  228.7   0.0    6.5e-68  228.0   0.0    1.4  1  Lactamase_B_6  Metallo-beta-lactamase superfamily domain
    1.6e-46  158.6   0.0    1.6e-46  158.6   0.0    2.1  3  CPSF100_C      Cleavage and polyadenylation factor 2 C-termin
    1.8e-16   60.4   0.0    9.3e-16   58.1   0.0    2.2  2  Beta-Casp      Beta-Casp domain
    2.5e-12   46.5   0.1    7.5e-12   45.0   0.0    1.9  2  RMMBL          Zn-dependent metallo-hydrolase RNA specificity
  ------ inclusion threshold ------
      0.023   14.2   0.0      0.071   12.6   0.0    1.7  2  Lactamase_B_2  Beta-lactamase superfamily domain
      0.025   14.6   0.0      0.053   13.5   0.0    1.5  1  Lactamase_B    Metallo-beta-lactamase superfamily


Domain annotation for each model (and alignments):
>> Lactamase_B_6  Metallo-beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  228.0   0.0   2.2e-71   6.5e-68       1     193 []      20     243 ..      20     243 .. 0.89

  Alignments for each domain:
  == domain 1  score: 228.0 bits;  conditional E-value: 2.2e-71
  Lactamase_B_6   1 lLeld.nvkiLlDvGwdeskvslesalkelekviptvdliLLshatlehlGayallyakfksklllnipvyatlpvvkLGrvslldlyaskgllgp 95 
                    lLeld +vkiL+DvGwde+ +++ ++lk lek +pt+++iLL+hat++hlGa+a+++++f+  l+++ip+yatlpv++LGr++l+dlyas+ l g+
     KHJ34281.1  20 LLELDgGVKILIDVGWDET-FDV-EKLKMLEKQVPTLSIILLTHATISHLGAFAHCCKHFP--LFSRIPIYATLPVIQLGRTLLQDLYASTPLAGT 111
                    79***88***********8.555.69**********************************6..99****************************996 PP

  Lactamase_B_6  96 edseel.........................eledideafdkiktlkYsQkl.elkskl....dgltitaynaGhtlGGtiWkiskesekivYavd 161
                    +  ++                          + e+i+++f  i++lkYsQ++ +++s+l    +gltitaynaGhtlGGtiW+i++++e+ivYavd
     KHJ34281.1 112 KIPASTlseasysysqktsafldseillpspTPEEIQTYFGLIHPLKYSQPQqPIPSPLspplNGLTITAYNAGHTLGGTIWHIQHGLESIVYAVD 207
                    643333366677888888888888777666666*****************6547888555555********************************* PP

  Lactamase_B_6 162 wnhakeshLngaalldssg....kvleqllrptali 193
                    wn+a+e++L+gaa+l+++g    +v+eql++ptali
     KHJ34281.1 208 WNQARENVLAGAAWLGGAGggggEVIEQLRKPTALI 243
                    ***************87666777***********98 PP

>> CPSF100_C  Cleavage and polyadenylation factor 2 C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.3       1.1   3.2e+03      49      57 ..     526     534 ..     487     560 .. 0.48
   2 ?   -3.8   0.4       4.4   1.3e+04      58      64 ..     638     644 ..     606     690 .. 0.51
   3 !  158.6   0.0   5.3e-50   1.6e-46       1     170 []     793     965 ..     793     965 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.1
   CPSF100_C  49 eeeeeeeee 57 
                 +++++++e+
  KHJ34281.1 526 SDSSDSDES 534
                 111111111 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 4.4
   CPSF100_C  58 askkqkl 64 
                   kk++ 
  KHJ34281.1 638 LGKKRRW 644
                 2222222 PP

  == domain 3  score: 158.6 bits;  conditional E-value: 5.3e-50
   CPSF100_C   1 VkLsdsLvksLkwqkveglevatvtgeleieeeaeeaeeeekeeeeeeeeeeeeeeeaskkqkl..aeksekeaseeeseekkeslptldvlpankas. 96 
                 VkL+dsL++ Lkwq+++gl++atvt++++ +                +e  e++ e ++kk kl   e++e ++ +  ++++ ++lp+ldvlp+n++s 
  KHJ34281.1 793 VKLTDSLLSGLKWQNIKGLSIATVTARINAS---------------PSEPIETKTEGNNKKPKLpiIENEEVKQGAVVTTSRPTELPILDVLPSNMVSa 876
                 8***************************922...............222222222233334444333444445566778889999************** PP

   CPSF100_C  97 vrsaaqplfvGdlrLadLkkallssgikAEFrgeGtLvidgaVaVrKsakGrieiegvvle...............tfyeVrkaiYegl 170
                 +rs+aqpl vGdlrLadL+k++++sg+kAEFrgeG+L+id++V+VrK a+Grieie+++l+               tf++Vr+ iY+gl
  KHJ34281.1 877 ARSVAQPLQVGDLRLADLRKIMQTSGYKAEFRGEGMLLIDNSVIVRKIATGRIEIESTALSteftstisttlqqgaTFFAVRDRIYQGL 965
                 **************************************************************************************987 PP

>> Beta-Casp  Beta-Casp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.4   4.1e+03      91     110 .]     173     192 ..     168     192 .. 0.86
   2 !   58.1   0.0   3.1e-19   9.3e-16       2     101 ..     290     432 ..     289     435 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.4
                 TTSEEEESS---TTSHHHHH CS
   Beta-Casp  91 prntvilvgyqaegTlgrkl 110
                 p n + ++ y a  Tlg+++
  KHJ34281.1 173 PLNGLTITAYNAGHTLGGTI 192
                 678999***********876 PP

  == domain 2  score: 58.1 bits;  conditional E-value: 3.1e-19
                 HHHHHHH..HCTT..TT...S-S.-EEEEE-HHHHHHHHHGGGGGGE-SHH.....HHH..H...HH................................ CS
   Beta-Casp   2 qellylLeelwkekkle...dlk.lpiyldsplaskatevYkeyaeveaks.lewmesk..ke.eln................................ 60 
                 +el+ylLe+ w+ + ++    l+   +y++s+ + +++++        +ks lewm++   +e e+n                                
  KHJ34281.1 290 LELAYLLEHTWRTETKNdssPLQaSRLYVASRNIGATIRY--------TKSmLEWMDEGiiREfEANagsnqkqglsdsghgtgpfdfkhlrllerraq 380
                 8**********998744588444489**************........9999*******9988888899*************************99999 PP

                 ...........HS-SSEEEEES-TTSSSSHHHHHHHHHTTSTTSEEEESS-- CS
   Beta-Casp  61 ...........sskgpkvilassgmlegGrsrellkklledprntvilvgyq 101
                             ++  kvilas+ +le+G+sre+l+k+ +d++n+vi++++ 
  KHJ34281.1 381 idrilgetdnlGRSISKVILASDKSLEWGFSREILRKISDDSKNLVIFTERV 432
                 9999999888855567*********************************985 PP

>> RMMBL  Zn-dependent metallo-hydrolase RNA specificity domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1       3.7   1.1e+04      24      51 ..      45      74 ..      44      77 .. 0.74
   2 !   45.0   0.0   2.5e-15   7.5e-12       2      62 .]     706     776 ..     705     776 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 3.7
       RMMBL 24 elirklkprn..vilvHGeeeatsalarll 51
                ++++k  p    + l H    ++ a+a  +
  KHJ34281.1 45 KMLEKQVPTLsiILLTHATISHLGAFAHCC 74
                556666666676888899999999999877 PP

  == domain 2  score: 45.0 bits;  conditional E-value: 2.5e-15
       RMMBL   2 ipvkarieeidfSgHadknellelirklkprnvilvHGeeeatsalarllk..........eeegidvfiP 62 
                 ++++ r +++df g +dk++l++li++++pr++il+ G +e+t++la++++          ee+ idv++P
  KHJ34281.1 706 VSLQVRLAFVDFAGLHDKRSLQMLIPLIQPRKLILIGGIKEETLSLANDCRkllaahtgssEESTIDVYTP 776
                 6789999*******************************************555555666658889****98 PP

>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.4e-05     0.071       3      68 ..      29      93 ..      28     116 .. 0.79
   2 ?   -2.6   0.0       1.1   3.3e+03     100     155 ..     174     237 ..     153     244 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.4e-05
                   EEES--TT..HHHHHTCGGS--S.SS--..SEEEEE-SS--HHHHGGGGCCCC....C--EEEEEEEEHHHHH CS
  Lactamase_B_2  3 iLiDagpd..lrqqalralqPve.lrdelppidaVllthaHyDHlaglltlre....lrpkklplyapkgvla 68
                   iLiD g+d  +        ++ + l +++p +  +lltha + Hl  + ++ +    +  +++p+ya++ v++
     KHJ34281.1 29 ILIDVGWDetFD------VEKLKmLEKQVPTLSIILLTHATISHLGAFAHCCKhfplF--SRIPIYATLPVIQ 93
                   9*******5433......3344457899*****************9888888877543..3499***999987 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.1
                    STTEEEEEEEE-EE--C..TCCE-TTTSEEEEEECTTEE......EEEESS-S---HHHHHHHC CS
  Lactamase_B_2 100 dggleitatparhksgr..rldrnagdtlGlriegggkr......vyyigDtgyipeeigerlg 155
                      gl+ita  a h+ g    + ++  + + +++++++ r      ++++g+ g   +e+ e+l+
     KHJ34281.1 174 LNGLTITAYNAGHTLGGtiWHIQHGLESIVYAVDWNQARenvlagAAWLGGAGGGGGEVIEQLR 237
                    4578888888888888755555555566666666555555555556666666666666555555 PP

>> Lactamase_B  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.8e-05     0.053       8      70 ..      18      79 ..      12      91 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.8e-05
                 EEEEE.ETTCEEEES--SCHHHHHHHHHHHHHTSGGGGEEEEE-SBSSHHHHTTGGGCTTHHCC CS
  Lactamase_B  8 sylie.gdggviLiDtGtsteaaraalelaalglkpkdvdavilTHlHlDHiGglgglveatdv 70
                   l+e ++g  iLiD G+++ ++ ++  l+ l+++   ++ ++lTH+ + H G+ ++ +++++ 
   KHJ34281.1 18 QSLLElDGGVKILIDVGWDETFDVEK--LKMLEKQVPTLSIILLTHATISHLGAFAHCCKHFPL 79
                 56888788999**************8..7************************99999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (969 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       548  (0.030565); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.42
# Mc/sec: 6865.46
//
Query:       KHJ34282.1  [L=996]
Description: putative sec23 sec24 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-54  185.4   0.0    9.7e-54  182.5   0.0    2.1  2  Sec23_trunk     Sec23/Sec24 trunk domain
    3.1e-24   84.7   0.0    7.7e-24   83.5   0.0    1.7  1  Sec23_helical   Sec23/Sec24 helical domain
    2.3e-17   63.5   0.1    4.7e-17   62.5   0.1    1.5  1  Sec23_BS        Sec23/Sec24 beta-sandwich domain
    4.1e-16   58.7   5.6    8.8e-16   57.7   5.6    1.6  1  zf-Sec23_Sec24  Sec23/Sec24 zinc finger
    6.5e-08   32.4   0.0    1.6e-07   31.1   0.0    1.8  1  Gelsolin        Gelsolin repeat


Domain annotation for each model (and alignments):
>> Sec23_trunk  Sec23/Sec24 trunk domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.5   0.0   2.7e-57   9.7e-54       2     239 ..     360     606 ..     359     610 .. 0.95
   2 ?   -0.0   0.0      0.15   5.3e+02     161     190 ..     698     726 ..     679     732 .. 0.80

  Alignments for each domain:
  == domain 1  score: 182.5 bits;  conditional E-value: 2.7e-57
                  S--EEEEEEE-SHHHHHHTHHHHHHHHHHHHCTTSST.............STT-EEEEEEESSSEEEEETSTTSSSSEEEEECHTTSCCSSTSSSSSE CS
  Sec23_trunk   2 kppvflFviDvsleaikegelkalkeslkqsLdllPe.............epralvglitfdsvvhffelkselrqpkelvvsdlqdvflpladrlLv 86 
                   ++++lF+iDvs+ea+++g l++++e +  +L    +              ++++vg++tfd+ +hf++l++ l++++++ +sdl+d+f+pl ++l+v
   KHJ34282.1 360 VELHWLFLIDVSQEAVNKGFLATFCEGIVAALYGYDNeektrnsrnqryfPKNCKVGIVTFDKDIHFYNLNPALDEAQMMLTSDLNDPFVPLHEGLFV 457
                  56899***************************88874478999999999999********************************************** PP

                  ETTTTHHHHHHHHHHHHHHSTT-TTC-----HHHHHHHHHHHHCHCTS-EEEEEEESS---SSTTTSS-SBTTSCCTSSTTCHHCHSCSSSCHHHHHH CS
  Sec23_trunk  87 plseseavledlLeelpemfavtagkrperalgpalkaavellkavetggkiivfvgslptvgaggklksredeslldidkekaklvkkadkfYkkLa 184
                  +++++++++++lL++lp++f++   k+pe al p l+aa+ +l+  +tggki++   +lpt g+ g l  r++ ++++ ++e +kl++++   + k+a
   KHJ34282.1 458 DPQDAKSNITSLLSKLPTLFTHI--KNPEPALLPTLNAALVALE--KTGGKILCSLATLPTWGP-GRLFLRDNGKQQNEESE-KKLYSTEHPGWRKIA 549
                  ***********************..*******************..99****************.9999**99999998888.899999999****** PP

                  HHHHHCTEEEEEEEEC..SS--SHHHHTHHHHTTT-EEEEETTTCCHHHHHHHHHHH CS
  Sec23_trunk 185 kecvkqgisvDlFlfs..ldyvdlaelkqlaeltgGqvvlydsFsaekdasklkqdl 239
                  +++++ g+ +D Fl+s    y d+a++++++ +tgG++++y++F+ ++d++kl +++
   KHJ34282.1 550 EKLSQAGVGIDFFLASpnGGYLDIATIGHVSAVTGGEIFYYPNFTYPRDSEKLINEV 606
                  **************972257*********************************9986 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.15
                  CCTSSTTCHHCHSCSSSCHHHHHHHHHHHC CS
  Sec23_trunk 161 slldidkekaklvkkadkfYkkLakecvkq 190
                  s+ d +k+ +k+v ++  +Y+ +ak++v +
   KHJ34282.1 698 SVTDNAKDCIKFVDQDA-VYSLIAKDAVSK 726
                  889999*******9999.********9976 PP

>> Sec23_helical  Sec23/Sec24 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.5   0.0   2.1e-27   7.7e-24       1      99 [.     711     808 ..     711     812 .. 0.96

  Alignments for each domain:
  == domain 1  score: 83.5 bits;  conditional E-value: 2.1e-27
                    -HHHHHHHHHHHHHHHTTTS-HHHHHHHHHHHHHHHHHHHHHH-------------GGGTTHHHHHHHHHTSTTTS--TT--HHHHHHHHHHHHH- CS
  Sec23_helical   1 DqeavtvllakqaidkalesgladarealdtslvdllsayrkvgasgsspsqlqlpeslklLPlyilallKspafrggnsvpaDervfalslllsl 96 
                    Dq+av +l+ak+a++k+ + +l+++r al ++ +d+++ yrk+ +++++p+ql+lpe+lk+L +yila++Ks+a++gg++ + D rv+ +++l+sl
     KHJ34282.1 711 DQDAVYSLIAKDAVSKITTTSLKEIRGALSEKNIDIFAGYRKNFSGSHPPGQLVLPENLKELSMYILAIIKSRALKGGQEQS-DRRVHDMRMLKSL 805
                    9****************************************************************************99999.***********99 PP

                    -HH CS
  Sec23_helical  97 pvd 99 
                     + 
     KHJ34282.1 806 GAL 808
                    765 PP

>> Sec23_BS  Sec23/Sec24 beta-sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.5   0.1   1.3e-20   4.7e-17       1      94 [.     615     698 ..     615     700 .. 0.95

  Alignments for each domain:
  == domain 1  score: 62.5 bits;  conditional E-value: 1.3e-20
                 EEEEEEEEEE-TTEEEEEEESSSEECSTBESSEESECSESEEEEEEEETT--EEEEEEESSBTCTTSEEEEEEEEEEEETTSEEEEEEEEEEEE CS
    Sec23_BS   1 gfnatlevrtSkelkvsgliGncvslsnvsekeiGeggtsewklcsldpdstlavyfdideklksgkqayiQfatlYthssgerrlRVttvalp 94 
                 g++a ++vr+S++l+vs++ Gn+ +++          gt e++l+++d++++l+v+f++d kl+ + +a++Q+a+lYt+s+g+rr+R  ++  +
  KHJ34282.1 615 GYQALMKVRCSNGLQVSSYTGNFRENK---------FGT-EIELGTIDENKALSVMFKYDGKLDGTLDAHFQCALLYTTSTGQRRVRSSNIIAS 698
                 79************************9.........788.8**********************************************9998665 PP

>> zf-Sec23_Sec24  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.7   5.6   2.5e-19   8.8e-16       1      39 []     284     322 ..     284     322 .. 0.99

  Alignments for each domain:
  == domain 1  score: 57.7 bits;  conditional E-value: 2.5e-19
  zf-Sec23_Sec24   1 PirCrrCraylNpfckidfggkrwiCnfCnhknevppeY 39 
                     P+rC+rCray+Npf+ +  gg++++Cn+Cn  n+vppeY
      KHJ34282.1 284 PPRCHRCRAYINPFMVFRSGGNKFVCNLCNYANDVPPEY 322
                     99************************************9 PP

>> Gelsolin  Gelsolin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.1   0.0   4.5e-11   1.6e-07       3      45 ..     838     882 ..     836     913 .. 0.81

  Alignments for each domain:
  == domain 1  score: 31.1 bits;  conditional E-value: 4.5e-11
                 EEEEEBSSSGGGEETTSEEEEEESSEEEEEEHTT..SHHHHHHHH CS
    Gelsolin   3 vlpkvvklsssslesgdcyLLdngftiflWiGke..ssqeeknfa 45 
                 ++p+  ++s s +e+g++yL+dng++ +lW+ ++  ++   ++f+
  KHJ34282.1 838 KMPPSIRCSFSRIETGGVYLIDNGQNCYLWMHAQtsPNFIMDLFG 882
                 789*******************************87777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (996 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.24s 00:00:00.93 Elapsed: 00:00:00.40
# Mc/sec: 7410.47
//
Query:       KHJ34283.1  [L=295]
Description: putative increased sodium tolerance protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-61  207.5   0.7    1.5e-61  207.1   0.7    1.1  1  Ist1      Regulator of Vps4 activity in the MVB pathway


Domain annotation for each model (and alignments):
>> Ist1  Regulator of Vps4 activity in the MVB pathway
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  207.1   0.7   8.5e-66   1.5e-61       1     164 []      12     173 ..      12     173 .. 0.99

  Alignments for each domain:
  == domain 1  score: 207.1 bits;  conditional E-value: 8.5e-66
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTT--SSSSSHHHHHHHHHHHHHH- CS
        Ist1   1 KtqlklaiqrlkllqkkkealakqarrdiaqlLengkeekArirveqliredillelleilelycelllarlsllekqkeldeelkEAvssliyAaprv 99 
                 K+qlkl+i+rl+++q+k+ea+ kq+rr +aqlLe+gk e+Arirve++ir di+ el+eilelycelllar +lle    +d++l+EAv+sl+yAap++
  KHJ34283.1  12 KVQLKLSITRLRMIQQKDEAVSKQQRRVMAQLLESGKFESARIRVENIIRSDITSELYEILELYCELLLARTGLLE-GPVCDPGLEEAVKSLVYAAPKT 109
                 89**************************************************************************.589******************* PP

                 TTTTTHHHHHHHHHTTS-HHHHHHHHTT-T.T--HHHHHHHS-----HHHHHHHHHHHHHHHT-S CS
        Ist1 100 selkELkelrdllaekyGkefakaavenkdngVnekvvkklsvktpskelvekylkeIAkeynve 164
                  e+kEL+ +r ll ek+Gkef+ +a+en+d++V++kv+kkls k+ps elv+ yl+eIA++y+ve
  KHJ34283.1 110 -EVKELHIVRCLLCEKFGKEFMISAMENSDKKVSDKVLKKLSFKPPSPELVNGYLEEIARTYGVE 173
                 .*************************************************************995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       682  (0.0380389); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2122.94
//
Query:       KHJ34284.1  [L=690]
Description: putative acyl- synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.6e-93  312.1   0.0    6.4e-93  311.6   0.0    1.1  1  AMP-binding  AMP-binding enzyme


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  311.6   0.0   3.6e-97   6.4e-93      17     421 ..     105     556 ..      92     557 .. 0.86

  Alignments for each domain:
  == domain 1  score: 311.6 bits;  conditional E-value: 3.6e-97
                  CCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEEEETCTCCCHHHHHHHH CS
  AMP-binding  17 sgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseakvliatvdselleklleaa 114
                   g ++ lTY+++ + +  l+agLrslG+  +d+V i++ +s+ w+++++a+++ ++ +v+ ++tl++e l   l++++a++++  +d +ll+kl +  
   KHJ34284.1 105 MGPYEYLTYGQYSDMALTLGAGLRSLGLVAKDKVHIFAGTSMSWLAMAHAAASQSLPIVTSYATLGEEGLTTSLTQTKASAIF--TDPDLLSKLINPL 200
                  4789*******************************************************************************..9999999999999 PP

                  SCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS...............-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHH.HHHC CS
  AMP-binding 115 akleavklvivldadellkeeelkeeeeseekae...............kpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslk.letr 196
                  +   +vk vi+ d+++l++++ +  +e  +   +               +p+++++++pddla+++YTSG+TG PKGV l+h+n++a+va ++ +   
   KHJ34284.1 201 KVATHVKFVIYNDQNKLKDSDIELLREAHP---NlrilslsalqqvgtsNPTDPVPPSPDDLACVMYTSGSTGIPKGVSLTHKNVIAAVAGINsVFYN 295
                  999999999999998888776655555333...134567889999****888999************************************9753323 PP

                  SCCTTT-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGC.CH.HHHHHHHHHHHT-SEEEEEHHHHHHH.......HH.CCCHHCHHHHC.... CS
  AMP-binding 197 fklkeddvvlsilplahifglilelllallsGatvvllpkdaa.ld.pklllelieklkvtviagvPrvleal.......le.sgalkaakkak.... 280
                  f l+ +d +l++lpl+hif++ + +++++++G ++++ ++ +  +   + + ++i+++ +t++ gvP+v+e l       ++ sg+lk     +    
   KHJ34284.1 296 F-LTTEDSILAYLPLSHIFEY-TYENTCMFWGLRIGYGNPRTLsALsMHNCEGDIKTFAPTILIGVPAVWETLrkgieakVSgSGRLK-----Rsvfh 386
                  3.6789**************8.99*************99998864468999**********************777665544444444.....02344 PP

                  ...............................CGTT-SEEEEESS-EBHHHHHHHHHHHTCEEEEEEEEGGGSSECEECHCTTTCTSTTS-BEE-TTEE CS
  AMP-binding 281 ...............................dlsslrlvllggeplspellrffralfgeevlegYGlTEttgvvtvlpleedkkklgsvGkplpgve 347
                                                   ++lr++l g+++l +++++f++     +++ gYGlTEt+++ t ++ + ++ +++svG p+ ++e
   KHJ34284.1 387 galrtkeficerslpgaemvsnfafsailegTGGRLRVCLNGAGALDEKTIKFISYNIA-PLVAGYGLTETCAMGT-VQSPLQW-SPNSVGAPVGCTE 481
                  44555677777777777777777777777633335999*************99999876.5**************9.6656665.4689********* PP

                  EEEE-TTTSCBEETTSE..EEEEEEETTS-SEBTT-HHHHHHHEEETCCEEEEEEEEEEETTSEEEEEEECCCEEE CS
  AMP-binding 348 vkivDeetgepvpdgee..GellvrgpgvmkgYlkkpeataeafdsegrwlrTGDlgrldedGyleivgRkkdlik 421
                  +k++   ++++ +d ++  Ge+l+rgp+vm+gY+ ++e+t+++f  +g+w+rTGD+g++d +G+l+i++R k+lik
   KHJ34284.1 482 IKLLSHPDLGYYADRTPprGEILIRGPSVMQGYYENEEETRKVFL-KGGWFRTGDVGEWDVNGHLKIIDRVKNLIK 556
                  ****9999********99**************************9.767**************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (690 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       304  (0.0169558); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 5049.20
//
Query:       KHJ34285.1  [L=190]
Description: putative neuronal calcium sensor 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.8e-24   84.1   7.2    1.3e-15   57.6   0.8    3.0  3  EF-hand_7     EF-hand domain pair
    7.9e-24   81.5   3.7    3.9e-06   26.4   0.1    5.2  5  EF-hand_6     EF-hand domain
    1.5e-23   80.5  12.4    3.4e-08   32.5   0.1    4.6  5  EF-hand_1     EF hand
    6.4e-16   57.1  12.2    4.7e-05   22.7   0.1    4.1  5  EF-hand_5     EF hand
    1.1e-12   47.6  12.2     0.0005   19.8   0.8    3.7  3  EF-hand_8     EF-hand domain pair
    2.5e-09   37.0   5.2     0.0021   18.0   0.1    3.8  4  EF-hand_4     Cytoskeletal-regulatory complex EF hand
    2.4e-05   24.6   0.5     0.0086   16.4   0.0    2.7  3  EF-hand_9     EF-hand domain
     0.0035   17.7   2.3       0.98    9.8   0.3    3.1  2  SPARC_Ca_bdg  Secreted protein acidic and rich in cysteine Ca
  ------ inclusion threshold ------
      0.033   14.1   1.5       0.44   10.4   0.1    3.1  4  EF-hand_10    EF hand
        0.1   13.0   0.3        6.7    7.1   0.0    2.9  3  EF-hand_14    EF-hand domain


Domain annotation for each model (and alignments):
>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.1   0.00093       1.7      22      71 .]      11      53 ..       5      53 .. 0.79
   2 !   27.7   0.2   1.5e-09   2.7e-06      16      69 ..      40      88 ..      39      90 .. 0.85
   3 !   57.6   0.8   7.3e-19   1.3e-15       2      68 ..      99     171 ..      98     174 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00093
   EF-hand_7 22 eellrllrkifqgagegsklsdeelellfkefDtdk.dGvisfdEFlklyr 71
                e+l +l         +  +++++el+++ k f +d+ +G ++  EF+k+yr
  KHJ34285.1 11 EQLGEL--------QRSTHFDKKELQQWYKGFLKDCpSGMLTKVEFQKIYR 53
                444433........3456677899********999988***********97 PP

  == domain 2  score: 27.7 bits;  conditional E-value: 1.5e-09
   EF-hand_7 16 dgyldkeellrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkl 69
                +g+l+k e+++++r++f     g+++s    +++f+ fD+dk+G+i+f EF  +
  KHJ34285.1 40 SGMLTKVEFQKIYRQFF---PFGDPSS--FADYVFNVFDSDKSGSIDFKEFICA 88
                699************99...5555533..466*******************976 PP

  == domain 3  score: 57.6 bits;  conditional E-value: 7.3e-19
   EF-hand_7   2 eklkeaFkelDtdgdgyldkeellrllrkifqgagegsklsdee......lellfkefDtdkdGvisfdEFlk 68 
                 +kl +aF+++D dgdg+++++e+l ++++i+ + g ++kl+ +e      ++++f+++D+d +G+++++EF++
  KHJ34285.1  99 DKLDWAFQLYDIDGDGKISYDEMLAIVEAIYKMVGSMVKLPTDEdtpekrVKKIFRMMDKDENGSLDMEEFKE 171
                 799*******************999*****99995555555544455556*********************87 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.27   4.8e+02      17      27 ..      22      32 ..      17      35 .. 0.84
   2 !    6.6   0.0    0.0048       8.6      14      28 ..      40      54 ..      36      61 .. 0.87
   3 !   26.4   0.1   2.2e-09   3.9e-06       3      27 ..      66      90 ..      64      96 .. 0.92
   4 !   21.5   0.0   7.9e-08   0.00014       5      26 ..     104     125 ..     104     133 .. 0.91
   5 !   22.1   0.1   4.9e-08   8.8e-05       2      24 ..     149     171 ..     148     175 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.27
   EF-hand_6 17 idaeElrkalr 27
                 d++El+++++
  KHJ34285.1 22 FDKKELQQWYK 32
                599*****997 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0048
   EF-hand_6 14 dGkidaeElrkalrk 28
                +G +++ E++k++r+
  KHJ34285.1 40 SGMLTKVEFQKIYRQ 54
                8************96 PP

  == domain 3  score: 26.4 bits;  conditional E-value: 2.2e-09
   EF-hand_6  3 reaFklfDkdgdGkidaeElrkalr 27
                +++F+ fD d++G+id++E++ al+
  KHJ34285.1 66 DYVFNVFDSDKSGSIDFKEFICALS 90
                589********************98 PP

  == domain 4  score: 21.5 bits;  conditional E-value: 7.9e-08
   EF-hand_6   5 aFklfDkdgdGkidaeElrkal 26 
                 aF+l+D dgdGki+++E+ ++ 
  KHJ34285.1 104 AFQLYDIDGDGKISYDEMLAIV 125
                 7*****************9986 PP

  == domain 5  score: 22.1 bits;  conditional E-value: 4.9e-08
   EF-hand_6   2 lreaFklfDkdgdGkidaeElrk 24 
                 ++++F+++Dkd +G++d+eE++ 
  KHJ34285.1 149 VKKIFRMMDKDENGSLDMEEFKE 171
                 689******************85 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.4   2.5e+03      18      27 ..      23      32 ..      18      34 .. 0.75
   2 ?    1.0   0.0      0.22   3.9e+02      14      27 ..      40      53 ..      40      55 .. 0.84
   3 !   26.3   0.2   1.8e-09   3.2e-06       3      27 ..      66      90 ..      64      92 .. 0.90
   4 !   32.5   0.1   1.9e-11   3.4e-08       2      27 ..     101     126 ..     100     128 .. 0.92
   5 !   25.8   0.8   2.6e-09   4.8e-06       2      25 ..     149     172 ..     148     175 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.4
                EHHHHHHHHH CS
   EF-hand_1 18 dfeEfkellk 27
                d++E++++ k
  KHJ34285.1 23 DKKELQQWYK 32
                7889998876 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.22
                SSEEEHHHHHHHHH CS
   EF-hand_1 14 dGkIdfeEfkellk 27
                +G +++ Ef+++ +
  KHJ34285.1 40 SGMLTKVEFQKIYR 53
                79999****99876 PP

  == domain 3  score: 26.3 bits;  conditional E-value: 1.8e-09
                HHHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1  3 keiFrefDkDgdGkIdfeEfkellk 27
                + +F++fD D++G Idf+Ef+ +l+
  KHJ34285.1 66 DYVFNVFDSDKSGSIDFKEFICALS 90
                679*****************99885 PP

  == domain 4  score: 32.5 bits;  conditional E-value: 1.9e-11
                 HHHHHHHHTTTSSSEEEHHHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkellk 27 
                 l+++F+++D DgdGkI+++E++++++
  KHJ34285.1 101 LDWAFQLYDIDGDGKISYDEMLAIVE 126
                 89********************9986 PP

  == domain 5  score: 25.8 bits;  conditional E-value: 2.6e-09
                 HHHHHHHHTTTSSSEEEHHHHHHH CS
   EF-hand_1   2 lkeiFrefDkDgdGkIdfeEfkel 25 
                 +k+iFr++DkD +G +d eEfke 
  KHJ34285.1 149 VKKIFRMMDKDENGSLDMEEFKEG 172
                 79********************97 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.4   6.1e+03      17      23 ..      23      29 ..      23      29 .. 0.82
   2 ?   -1.6   0.0       1.2   2.2e+03      13      24 ..      40      51 ..      40      52 .. 0.75
   3 !   19.0   0.4   3.7e-07   0.00067       3      21 ..      66      85 ..      64      87 .. 0.91
   4 !   22.7   0.1   2.6e-08   4.7e-05       4      23 ..     104     123 ..     101     125 .. 0.87
   5 !   21.4   0.5   6.7e-08   0.00012       2      23 ..     150     171 ..     149     173 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.4
                -HHHHHH CS
   EF-hand_5 17 skeELkt 23
                +k EL++
  KHJ34285.1 23 DKKELQQ 29
                7899986 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.2
                SSCE-HHHHHHH CS
   EF-hand_5 13 DGkIskeELktl 24
                +G ++k E++++
  KHJ34285.1 40 SGMLTKVEFQKI 51
                578888899875 PP

  == domain 3  score: 19.0 bits;  conditional E-value: 3.7e-07
                H.HHHHH-SS-SSCE-HHHH CS
   EF-hand_5  3 d.tFqaiDlNgDGkIskeEL 21
                d +F+ +D +++G I++ E+
  KHJ34285.1 66 DyVFNVFDSDKSGSIDFKEF 85
                669****************9 PP

  == domain 4  score: 22.7 bits;  conditional E-value: 2.6e-08
                 HHHHH-SS-SSCE-HHHHHH CS
   EF-hand_5   4 tFqaiDlNgDGkIskeELkt 23 
                 +Fq  D +gDGkIs +E  +
  KHJ34285.1 104 AFQLYDIDGDGKISYDEMLA 123
                 6****************866 PP

  == domain 5  score: 21.4 bits;  conditional E-value: 6.7e-08
                 HHHHHHH-SS-SSCE-HHHHHH CS
   EF-hand_5   2 kdtFqaiDlNgDGkIskeELkt 23 
                 k+ F+++D++  G +++eE+k+
  KHJ34285.1 150 KKIFRMMDKDENGSLDMEEFKE 171
                 679*****************96 PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.8   2.8e-07    0.0005      28      49 ..      65      86 ..      39      90 .. 0.75
   2 !   18.6   0.2   6.7e-07    0.0012      25      50 ..      98     123 ..      96     127 .. 0.89
   3 !   15.6   0.7   6.1e-06     0.011       8      50 ..     126     171 ..     125     175 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 2.8e-07
   EF-hand_8 28 vdilfrefDtdgdGkisfeEFc 49
                +d +f+ fD d++G i+f+EF+
  KHJ34285.1 65 ADYVFNVFDSDKSGSIDFKEFI 86
                7899*****************7 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 6.7e-07
   EF-hand_8  25 eeevdilfrefDtdgdGkisfeEFcv 50 
                 e+++d+ f + D+dgdGkis++E ++
  KHJ34285.1  98 EDKLDWAFQLYDIDGDGKISYDEMLA 123
                 6899*******************776 PP

  == domain 3  score: 15.6 bits;  conditional E-value: 6.1e-06
   EF-hand_8   8 eelrril.rilglkk..glseeevdilfrefDtdgdGkisfeEFcv 50 
                 e  ++++ ++++l+   ++ e+ v  +fr +D d++G ++ eEF +
  KHJ34285.1 126 EAIYKMVgSMVKLPTdeDTPEKRVKKIFRMMDKDENGSLDMEEFKE 171
                 5667888888888889888899999*******************87 PP

>> EF-hand_4  Cytoskeletal-regulatory complex EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.53   9.6e+02      23      47 ..       5      29 ..       2      58 .. 0.69
   2 !    8.3   0.1    0.0012       2.1      47      71 ..      67      91 ..      60      94 .. 0.86
   3 !   18.0   0.1   1.2e-06    0.0021      41      80 ..      97     136 ..      88     146 .. 0.84
   4 !   11.1   0.1   0.00017       0.3      41      65 ..     145     169 ..     140     174 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.53
   EF-hand_4 23 dnkltgdkvapvlknskleedklek 47
                ++kl+++++  + +++++++++l++
  KHJ34285.1  5 QSKLSQEQLGELQRSTHFDKKELQQ 29
                4566666666666666666666655 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0012
   EF-hand_4 47 kiwdladidedgkldfeefciamrl 71
                 ++++ d d+ g++df+ef+ a+ +
  KHJ34285.1 67 YVFNVFDSDKSGSIDFKEFICALSV 91
                578899*************999865 PP

  == domain 3  score: 18.0 bits;  conditional E-value: 1.2e-06
   EF-hand_4  41 eedklekiwdladidedgkldfeefciamrlifdlvngei 80 
                  edkl+  ++l did dgk+ ++e+  ++  i+ +v   +
  KHJ34285.1  97 MEDKLDWAFQLYDIDGDGKISYDEMLAIVEAIYKMVGSMV 136
                 4799*******************************96543 PP

  == domain 4  score: 11.1 bits;  conditional E-value: 0.00017
   EF-hand_4  41 eedklekiwdladidedgkldfeef 65 
                 +e++++ki+ + d de+g+ld+eef
  KHJ34285.1 145 PEKRVKKIFRMMDKDENGSLDMEEF 169
                 578899******************9 PP

>> EF-hand_9  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       4.3   7.8e+03      36      43 ..      26      33 ..      20      56 .. 0.65
   2 !   16.4   0.0   4.8e-06    0.0086       2      63 ..      67     126 ..      66     129 .. 0.89
   3 !    8.4   0.2    0.0015       2.8       3      59 ..     104     170 ..     102     174 .. 0.70

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 4.3
   EF-hand_9 36 eLeelake 43
                eL++++k 
  KHJ34285.1 26 ELQQWYKG 33
                67777764 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 4.8e-06
   EF-hand_9   2 tvFevcDtqktGrVpvsrlidyLravtaqdpeeseLeelakelDPdgedasvdldtflrvmr 63 
                  vF+v+D +k G +  ++ i  L  +  +   e +L+   +++D dg  +++  d  l+++ 
  KHJ34285.1  67 YVFNVFDSDKSGSIDFKEFICALSVTS-RGRMEDKLDWAFQLYDIDGD-GKISYDEMLAIVE 126
                 68*********************7655.599***************99.9999999888875 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.0015
   EF-hand_9   3 vFevcDtqktGrVpvsrlidyLrav....taq.......dpeeseLeelakelDPdgedasvdldtfl 59 
                  F+++D++  G++   +++++ +a     ++        d++e ++ +  +++D d++ +s+d++ f+
  KHJ34285.1 104 AFQLYDIDGDGKISYDEMLAIVEAIykmvGSMvklptdeDTPEKRVKKIFRMMDKDEN-GSLDMEEFK 170
                 5888888888888877777776654222222233333338888899999999998888.999999997 PP

>> SPARC_Ca_bdg  Secreted protein acidic and rich in cysteine Ca binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.1     0.035        63      45     111 ..      17      86 ..       2      88 .. 0.63
   2 !    9.8   0.3   0.00055      0.98      51      86 ..      96     131 ..      90     172 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.035
  SPARC_Ca_bdg  45 eeknlkeckepvawkFsklDtnsdkvlsksELaplraplvkleh...CikpflescDadkdkkislkEwc 111
                   +++++   ke  +w    l     ++l+k E ++++ ++ ++       +  ++  D+dk ++i+ kE++
    KHJ34285.1  17 QRSTHFDKKELQQWYKGFLKDCPSGMLTKVEFQKIYRQFFPFGDpssFADYVFNVFDSDKSGSIDFKEFI 86 
                   4444444444445555555555778888888888888888775411144678999999999999999985 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00055
  SPARC_Ca_bdg  51 eckepvawkFsklDtnsdkvlsksELaplraplvkl 86 
                   ++++++ w F+  D + d+ +s  E+ ++ + + k+
    KHJ34285.1  96 RMEDKLDWAFQLYDIDGDGKISYDEMLAIVEAIYKM 131
                   578899*******************99988877665 PP

>> EF-hand_10  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       2.8     5e+03      35      48 ..      40      53 ..      38      54 .. 0.80
   2 ?    0.4   0.1      0.33   5.9e+02      21      43 ..      63      85 ..      62      87 .. 0.84
   3 ?   -2.9   0.0       3.7   6.7e+03       1       7 [.     115     121 ..     115     127 .. 0.80
   4 ?   10.4   0.1   0.00025      0.44      24      45 ..     150     171 ..     145     175 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2.8
  EF-hand_10 35 sgrLegeEieeFyk 48
                sg L   E+++ y+
  KHJ34285.1 40 SGMLTKVEFQKIYR 53
                68889999998887 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.33
  EF-hand_10 21 eYAekLFkkcDkSksgrLegeEi 43
                ++A  +F   D  ksg+++ +E+
  KHJ34285.1 63 SFADYVFNVFDSDKSGSIDFKEF 85
                57888999999999999998886 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 3.7
  EF-hand_10   1 kmsfkEv 7  
                 k+s++E+
  KHJ34285.1 115 KISYDEM 121
                 7899998 PP

  == domain 4  score: 10.4 bits;  conditional E-value: 0.00025
  EF-hand_10  24 ekLFkkcDkSksgrLegeEiee 45 
                 +k+F+  Dk ++g+L+ eE++e
  KHJ34285.1 150 KKIFRMMDKDENGSLDMEEFKE 171
                 689****************987 PP

>> EF-hand_14  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.0    0.0037       6.7       2      27 ..      65      90 ..      64      96 .. 0.92
   2 ?   -1.1   0.0       1.4   2.4e+03       3      25 ..     102     124 ..     101     128 .. 0.83
   3 ?    2.0   0.0      0.14   2.6e+02      54      74 ..     155     175 ..     141     184 .. 0.62

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0037
  EF-hand_14  2 edllfdlfkdeetdklsvakllkaLa 27
                +d +f++f++++++++ +++++ aL+
  KHJ34285.1 65 ADYVFNVFDSDKSGSIDFKEFICALS 90
                79*******************99986 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 1.4
  EF-hand_14   3 dllfdlfkdeetdklsvakllka 25 
                 d  f+l++ ++++k+s  ++l+ 
  KHJ34285.1 102 DWAFQLYDIDGDGKISYDEMLAI 124
                 66799***999****99998865 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.14
  EF-hand_14  54 eaeesetleldretFkkcvee 74 
                  + + e+ +ld e+Fk+  + 
  KHJ34285.1 155 MMDKDENGSLDMEEFKEGSKR 175
                 234456677777777775555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       645  (0.0359752); expected 358.6 (0.02)
Passed bias filter:                      544  (0.0303419); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 1459.23
//
Query:       KHJ34286.1  [L=846]
Description: putative trna (cytosine-5-)-methyltransferase ncl1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-32  112.3   0.1    1.5e-24   86.7   0.0    3.3  3  Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
  ------ inclusion threshold ------
       0.15   12.2   0.0       0.46   10.6   0.0    1.8  1  FtsJ             FtsJ-like methyltransferase


Domain annotation for each model (and alignments):
>> Methyltr_RsmB-F  16S rRNA methyltransferase RsmB/F
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.1   3.5e-08   0.00031       3      32 ..     162     191 ..     160     231 .. 0.81
   2 !   86.7   0.0   1.7e-28   1.5e-24      32     155 ..     234     368 ..     229     384 .. 0.92
   3 ?    0.6   0.0      0.04   3.6e+02     175     199 ..     444     467 ..     411     468 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 3.5e-08
                      HH---TT-EEEESS-TTSHHHHHHHHHTTT CS
  Methyltr_RsmB-F   3 lLapqeeetilDlcaaPGgKTthiaelmkn 32 
                      l++++++ t+lD+caaPG+K + ++e+++ 
       KHJ34286.1 162 LMDLKPGMTVLDMCAAPGSKAAQLLEMIHA 191
                      67889999******************9654 PP

  == domain 2  score: 86.7 bits;  conditional E-value: 1.7e-28
                      TTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CTCCHHHHCC.............EEEEEEEE--CCGGGTTT-TCHHHH--HHHHHHHH CS
  Methyltr_RsmB-F  32 nkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg...........elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqla 114
                       +g ++A+d + +R + +++ lkrL+  n+iv++ Da+ ++++               +fDriL D+PCsg g+ir++ ++    ++   + l+
       KHJ34286.1 234 ATGLLIANDSDYKRSHMLIHQLKRLSSPNLIVTNHDATMYPSIKLAsssknssantyLKFDRILADVPCSGDGTIRKNVNLWKDWNPGSAIGLH 327
                      57889*********************************999876656788999999999**********************8899********* PP

                      HHHHHHHHHHCCCEEEEEEEEEEES--STTTTHHHHHHHHH CS
  Methyltr_RsmB-F 115 klqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLk 155
                        q ++l  a+++lk gG +vYsTCs+++ Ene+v+ +a+ 
       KHJ34286.1 328 MTQVRILVRALQMLKVGGRVVYSTCSMNPIENEAVVSTAIL 368
                      ************************************97654 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.04
                      ECEECTSEEE-TTTTSS-SEEEEEE CS
  Methyltr_RsmB-F 175 lgeeagtlrllPhtenkdgffiakl 199
                      +  ++  +r++ h +++ gffia l
       KHJ34286.1 444 IPLQN-CVRVYAHLQDTGGFFIAVL 467
                      44455.89***************87 PP

>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   5.1e-05      0.46      19      45 ..     165     191 ..     162     365 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 5.1e-05
                 S-TT-EEEECT-TTSHHHHHHCCT.T. CS
        FtsJ  19 fkpgktvvDlgaaPGgwsqvllqrlga 45 
                 +kpg+tv+D +aaPG+ +  ll+ ++a
  KHJ34286.1 165 LKPGMTVLDMCAAPGSKAAQLLEMIHA 191
                 689*************98888887733 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (846 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       975  (0.0543812); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.44
# Mc/sec: 5719.98
//
Query:       KHJ34287.1  [L=527]
Description: putative oxysterol-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.5e-49  167.6   6.2    5.7e-47  160.3   6.2    2.5  1  Oxysterol_BP  Oxysterol-binding protein


Domain annotation for each model (and alignments):
>> Oxysterol_BP  Oxysterol-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.3   6.2   3.2e-51   5.7e-47       4     355 ..     109     495 ..     107     521 .. 0.81

  Alignments for each domain:
  == domain 1  score: 160.3 bits;  conditional E-value: 3.2e-51
                   CCHTTSTT.-BCCCS..---GGGEEEEEHHHHHHHCCTTCHHHHHHHC.SSHHHHHHHHHHHHHHCCCGCTSTSSSEEE---TT-EEEEEETTCEE. CS
  Oxysterol_BP   4 silkkciG.kDLski..slPvffneplSlLqrlaedleyselLdkaakeddsleRlayVaaFalSsyastikrrlkKPFNPlLGEtfelvredkgf. 96 
                    ilkk +G  D+ ++  slP +++ep+  L+ + +++  ++++ ++  ++d++eR++ V++F++++  +++k++ +KP+N  LGE f++ +e ++  
    KHJ34287.1 109 GILKKFVGvADIATVrfSLPAQLLEPTPNLE-YWNYIDQPSVFAAIGLSNDPVERMLEVLRFWFTKDLKYVKGKPCKPYNSTLGEFFRCNWEVNNEi 204
                   678888884477665449************9.789*************999****************************************774444 PP

                   ..............................................EEEEEEEETTTTEEEEEEEE..CTEEEEEEEEEEEEE-SSEEEEEE-SE.. CS
  Oxysterol_BP  97 ..............................................rfiaEQVsHhPpvsAfhaes..egweldgeikvkskflgkslevkpeGt.. 143
                                                                  f++EQ+sHhPpvsAf +++  +g++ +g  +++ kf+g s++v+p  +  
    KHJ34287.1 205 ptiaelkkigegsrsssrskfsrnsststtvsksfsispisdkikvSFLTEQTSHHPPVSAFIVDCpeRGLQARGFDQITAKFTGMSVKVSPGEHnf 301
                   667777777888899999999999******************************************9999*********************944322 PP

                   .EEEEEEEESEEEEEEE--EEEEE-TTTTS-EEEEEEEEEEEETTT--EEEEEEE---SSS---SSEEEEEEEE..............TTS-EEEEE CS
  Oxysterol_BP 144 .ahlellkksgehYtwtkpttivhniivgklwvelsgeveitnhstgdkakleFkkkglfsskksnkvegkvkd..............kkkevlyei 225
                    ++++l+++++e+Y++t+pt+++ ++i g+l v + ++++it ++t+ k++l++ ++++++ k++nkveg++++               + + l +i
    KHJ34287.1 302 gFYITLKDRDDEEYHLTHPTAHIGGLIRGNLNVTVCEQCYITCKKTQIKTILHYVEESWLG-KSQNKVEGVIFKynpsndvimkikdvPESDILGRI 397
                   246777888*********************************999***************6.99*********877544555555444444555555 PP

                   EEETTTEEEEEETTSTTS--EEEEETT-BSXXGCGSSTTBCCCCCCH-----...GGG--HHHHCCT---.TT.GGS-TTBGGG-HHHHHHHTT-HH CS
  Oxysterol_BP 226 sGkwdeelyikkkktekkeeeedasekskvkekeeqeefeseklWkasplpkaeeyygftkfavtlNeieeke.kslaptDsRlRpDqraleegdid 321
                   sG w+e++y++  ++                +k+  +  + + l+ a++         + +++++l   +e++ ++ + t         a+ e++++
    KHJ34287.1 398 SGAWKETVYFSLGSS----------------NKHRIPLVDLTPLYPAEKI--------VPPMTFQLP--NESRrQWYPVT--------EAIDERQYS 460
                   566666665533222................3333344445556666444........346778872..22112555555........59******* PP

                   HHHHHHHHHHHHHHHHHHHHCCTT.----SSEEEE CS
  Oxysterol_BP 322 eAeeeKkrlEekQRerrkereekk.ewkpkwFeke 355
                   +A++ K +lEekQR++ kere+k+ +w+p++F   
    KHJ34287.1 461 KATSLKLELEEKQRMKVKEREQKDtKWTPRFFVGA 495
                   ********************776657******654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (527 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       907  (0.0505884); expected 358.6 (0.02)
Passed bias filter:                      565  (0.0315132); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 3576.16
//
Query:       KHJ34288.1  [L=311]
Description: putative 3-oxo-5-alpha-steroid 4-dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-34  119.0   1.6    2.5e-34  118.4   1.6    1.3  1  Steroid_dh  3-oxo-5-alpha-steroid 4-dehydrogenase
     0.0049   16.4   0.3     0.0093   15.5   0.2    1.5  1  DUF1295     Protein of unknown function (DUF1295)
     0.0051   17.2   0.9     0.0073   16.7   0.1    1.7  2  PEMT        Phospholipid methyltransferase
  ------ inclusion threshold ------
       0.11   12.7   0.4       0.19   12.0   0.4    1.4  1  Blt1        Blt1 N-terminal domain


Domain annotation for each model (and alignments):
>> Steroid_dh  3-oxo-5-alpha-steroid 4-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.4   1.6   5.6e-38   2.5e-34       2     148 ..     160     310 ..     159     311 .] 0.94

  Alignments for each domain:
  == domain 1  score: 118.4 bits;  conditional E-value: 5.6e-38
  Steroid_dh   2 kmpllivakavl.fcvlnGllqarylsyyqpy..aedylkkdrlllgivlfvlgmliniksdiiLrelrkegetkykiprgglFelvsapnyfgEilew 97 
                 +mp+++++k+ + +++ +G++ a+++ + + y   e+ l ++  l+g+v +++g+l+n +++i+L +lr +g t++ +prg+ F+lv++pny++E++ w
  KHJ34288.1 160 TMPIMNIFKNSAhYWIGSGIFIAYFIYHPNSYtqRESPLIDNINLIGLVTYIFGELSNAHTHITLSRLRSKGGTERGVPRGYGFNLVTCPNYLFEVIAW 258
                 89*********99**********777766666776667777999******************************************************* PP

  Steroid_dh  98 igyalvtkslaalaFalftvlnltvraaahhkwykkkf.ekYpksRkiliPf 148
                 ig  +v ksla+++F+  + +++ v+a+++ k  +++f + Y k++++++P 
  KHJ34288.1 259 IGINIVNKSLATAIFTAIAWAQMHVWALKKEKALRAEFpDTYKKKKHVIVPL 310
                 **************************************778**********6 PP

>> DUF1295  Protein of unknown function (DUF1295)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.2   2.1e-06    0.0093     102     196 ..     186     277 ..     159     295 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.1e-06
     DUF1295 102 alpvllaaaskeeqalkaldviglalwlvgivlealaDqQlsafkkdp.ankgkvldsGLwrysRHPNYfgealiWwglflialealeglealaia 196
                   p   +  ++e++ +  +++igl+ +++g + +a     ls+ +++  + +g     G +++   PNY++e++ W+g+ ++  + ++ + + aia
  KHJ34288.1 186 YHPNSYT--QRESPLIDNINLIGLVTYIFGELSNAHTHITLSRLRSKGgTERGVPRGYG-FNLVTCPNYLFEVIAWIGINIVNKSLATAI-FTAIA 277
                 3343333..34556778889999999999999999999999998877614456566666.566668*************99987665554.44444 PP

>> PEMT  Phospholipid methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       1.9   8.5e+03      55      63 ..     172     180 ..     135     190 .. 0.52
   2 !   16.7   0.1   1.6e-06    0.0073      44      95 ..     239     290 ..     202     300 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.9
        PEMT  55 eyvgstlgf 63 
                  y+ +  +f
  KHJ34288.1 172 HYWIGSGIF 180
                 233344444 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 1.6e-06
        PEMT  44 tsGiYrylnnPeyvgstlgflGlaLitgsaag.lllallvllvylialkfvEe 95 
                 ++  ++++  P y++ +++++G+ ++++s+a+ ++ a+ ++ +  +alk  E+
  KHJ34288.1 239 RGYGFNLVTCPNYLFEVIAWIGINIVNKSLATaIFTAIAWAQMHVWALK-KEK 290
                 4556999************************966777777777777776.665 PP

>> Blt1  Blt1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.4   4.2e-05      0.19      60     127 ..       6      76 ..       1      91 [. 0.72

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 4.2e-05
        Blt1  60 sitvhlksarnpalelsldnvalattsvkdlkeavqervkeae.....tkvpldkikiLykkkPvsgktlaev 127
                 +++v+ ks r+p+ +l+ +   + tt+v+d+k+++++  ++            +k k L ++k      ++ev
  KHJ34288.1   6 TLKVTNKSPRQPVKKLPATIQVTETTTVQDVKDQLSRL-TDGRsphrfGLFDPEKKKTLKDRKALI-LQIKEV 76 
                 678999***********999999***********9876.443336444444557777777777664.345555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 2475.10
//
Query:       KHJ34289.1  [L=578]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-07   32.2   0.1    4.2e-07   30.5   0.0    2.0  2  AAA_16    AAA ATPase domain
    0.00036   20.2   0.0     0.0011   18.5   0.0    1.8  2  AAA_25    AAA domain
     0.0073   16.0   0.0      0.015   15.0   0.0    1.4  1  AAA_29    P-loop containing region of AAA domain
     0.0092   16.0   0.0        3.7    7.6   0.0    2.4  2  AAA_5     AAA domain (dynein-related subfamily)
  ------ inclusion threshold ------
      0.017   14.3   0.0      0.033   13.3   0.0    1.4  1  DUF815    Protein of unknown function (DUF815)
      0.028   13.9   0.0       0.06   12.9   0.0    1.5  1  AAA_7     P-loop containing dynein motor region
       0.13   12.5   0.8        2.5    8.4   0.5    2.8  2  AAA_22    AAA domain


Domain annotation for each model (and alignments):
>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.0   1.6e-10   4.2e-07       5     165 ..     166     312 ..     162     320 .. 0.74
   2 ?   -1.8   0.1       1.4   3.6e+03     119     119 ..     395     395 ..     322     483 .. 0.59

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 1.6e-10
      AAA_16   5 ReeeleqLlsalervrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawreklee 103
                 R+ e+e+++++++   +g  ++ ll+Ge+G+GKss++  ++r ++ dg+  l++++d     i ++ l +a+++ e+ ++           +++e+ ++
  KHJ34289.1 166 RD-EQEKINDIVNGKITG--HYHLLIGEKGTGKSSMLLDAMRNVNSDGCSMLEAHADLE---IFRVRLGKAIDF-EFHEDYIGS-------YFSERGPR 250
                 44.458999999988777..899************************9999*******9...333334444433.444444433.......33333333 PP

      AAA_16 104 alaavpelagaea.srllellkrll.allsrderplvlvlDdlq..wadeaslqllaaLlrlles..k 165
                   +      + +  +r +++l + + ++ +r+ +plvl++  ++  + d + ++l+++L +++e    
  KHJ34289.1 251 DST------PILDiERAFNKLEKVAlRRKRRGNSPLVLIINSIHflRDDHDGRDLIELLQQRAEKwaA 312
                 322......1111378999999999899999999**********888888**********99886552 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.4
      AAA_16 119 l 119
                 +
  KHJ34289.1 395 M 395
                 1 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   4.5e-07    0.0011       9      65 ..     158     215 ..     149     231 .. 0.82
   2 ?   -2.8   0.0       1.5   3.9e+03      73      97 ..     413     437 ..     399     477 .. 0.67

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 4.5e-07
      AAA_25   9 avsvad.laapppprrwlvkgllpagelallaGapgtGKttlaldlalava.tGkpwlg 65 
                 ++++++ l+ ++++ +++v g +  g+ +ll+G  gtGK+ ++ld +  v   G++ l+
  KHJ34289.1 158 DAEDHWiLRDEQEKINDIVNGKI-TGHYHLLIGEKGTGKSSMLLDAMRNVNsDGCSMLE 215
                 5678886777************7.8*********************9998766766655 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.5
      AAA_25  73 kVlyvsaEdsedelrrRlravgeal 97 
                 k +++ aE++ d +++  +a  + +
  KHJ34289.1 413 KAWILGAEMDDDVINEQKYASAAMV 437
                 6788889998888877666655544 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   5.9e-06     0.015      23      45 ..     182     206 ..     172     207 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 5.9e-06
      AAA_29  23 g.atlltGpsGsGKST.llDAiqal 45 
                 g  +ll+G+ G+GKS+ llDA+  +
  KHJ34289.1 182 GhYHLLIGEKGTGKSSmLLDAMRNV 206
                 6679**********98468**9765 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0014       3.7       3      19 ..     186     202 ..     185     221 .. 0.80
   2 !    6.0   0.0    0.0043        11      64     124 ..     377     445 ..     308     458 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0014
                 EEE--SSSSHHHHHHHG CS
       AAA_5   3 lLvGppGtgKselaerl 19 
                 lL+G++GtgKs++    
  KHJ34289.1 186 LLIGEKGTGKSSMLLDA 202
                 8**********987655 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0043
                 -..G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..-SSSEEE---.............-EEEEEESS-- CS
       AAA_5  64 r..egeilvlDEveraesevlnsLlslleerrllleeggelvkakndd.ller......frviatanpld 124
                 +   g++++l+ v rae ++l++ + ++e++r+++ +  +  +a+ dd  +++       +v+a a    
  KHJ34289.1 377 KriGGRLIFLNRVARAE-DMLQACNDIIETERRWFLNKAWILGAEMDDdVINEqkyasaAMVLAQALVKA 445
                 26679999999999886.789999**********************998777678888866666665544 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.3e-05     0.033      53      89 ..     182     218 ..     166     226 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.3e-05
      DUF815  53 annvLLwGarGtGKSslvkallneyaeegLrlievek 89 
                  +  LL+G++GtGKSs++  ++++++++g  ++e + 
  KHJ34289.1 182 GHYHLLIGEKGTGKSSMLLDAMRNVNSDGCSMLEAHA 218
                 34579**********************9999998764 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.3e-05      0.06      34      65 ..     183     214 ..     168     228 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.3e-05
       AAA_7  34 kpvllvGptGtGKtviikdllkkldkekylsl 65 
                 +  ll+G++GtGK++++ d +++++++ +++l
  KHJ34289.1 183 HYHLLIGEKGTGKSSMLLDAMRNVNSDGCSML 214
                 56799*******************99988765 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.5   0.00097       2.5       9     127 ..     186     320 ..     181     331 .. 0.62
   2 ?    0.1   0.0      0.34   8.7e+02      49      91 ..     364     408 ..     326     418 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00097
      AAA_22   9 vvtGesGtGKTtllrrlleqldeeakaee.......erpevvfvtlpsst...sskdllrellralglelka....erlsseellealeqalrarav.. 91 
                 +++Ge+GtGK+  l   +++ + +            ++ e+++v l +       +d     +++ g         + l+ e+ +++le+ + +r++  
  KHJ34289.1 186 LLIGEKGTGKSSMLLDAMRNVNSD----GcsmleahADLEIFRVRLGKAIdfeFHEDYIGSYFSERG----PrdstPILDIERAFNKLEKVALRRKRrg 276
                 689*******98888877776422....133345444444444444444322122222333333333....2455588888888888888877777789 PP

      AAA_22  92 ..ielliiDEaqhlr..s..eealeeLrsllnl..srkgvqliL 127
                   + +lii  +++lr  +   +++e L ++++   +  +v++i+
  KHJ34289.1 277 nsPLVLIINSIHFLRddHdgRDLIELLQQRAEKwaANNLVTMIF 320
                 99999999999999765255888888776666555556666665 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.34
      AAA_22  49 sstsskdllrellralglelka..erlsseellealeqalrarav 91 
                 ++t s ++l+e+++ +g +l    + ++ e++l+a+++ +++ ++
  KHJ34289.1 364 HQTPSNSILEEVFKRIGGRLIFlnRVARAEDMLQACNDIIETERR 408
                 566788999999999999999988888999999999998887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (578 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.40
# Mc/sec: 4367.63
//
Query:       KHJ34290.1  [L=409]
Description: putative atpase family aaa domain-containing protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-37  128.5   0.0      5e-37  127.3   0.0    1.6  1  AAA              ATPase family associated with various cellul
    1.4e-07   31.1   0.0    3.4e-07   30.0   0.0    1.6  1  AAA_lid_3        AAA+ lid domain
    4.5e-06   27.2   0.2    0.00044   20.7   0.0    2.4  2  AAA_16           AAA ATPase domain
    5.4e-06   26.5   0.0    1.9e-05   24.7   0.0    1.9  2  AAA_14           AAA domain
    2.2e-05   24.8   0.0     0.0039   17.6   0.0    2.6  2  RNA_helicase     RNA helicase
    4.3e-05   23.3   0.0    8.7e-05   22.3   0.0    1.5  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
    4.5e-05   23.5   0.2    0.00059   19.8   0.2    2.7  1  AAA_5            AAA domain (dynein-related subfamily)
    4.6e-05   24.0   0.2     0.0028   18.2   0.0    2.4  2  AAA_18           AAA domain
    5.7e-05   23.3   0.0    0.00016   21.8   0.0    1.8  1  AAA_2            AAA domain (Cdc48 subfamily)
    0.00011   22.5   0.1     0.0052   17.1   0.0    2.7  2  AAA_22           AAA domain
     0.0005   20.2   0.0    0.00089   19.4   0.0    1.5  1  AAA_33           AAA domain
    0.00064   19.5   0.0     0.0011   18.7   0.0    1.4  1  IstB_IS21        IstB-like ATP binding protein
    0.00096   18.6   0.1      0.002   17.5   0.1    1.4  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.002   17.7   0.1      0.033   13.8   0.1    2.5  2  AAA_25           AAA domain
     0.0033   16.9   0.0        3.2    7.1   0.0    2.5  2  TniB             Bacterial TniB protein
     0.0037   17.2   0.1      0.015   15.2   0.0    2.0  2  NACHT            NACHT domain
     0.0045   16.7   0.0      0.011   15.5   0.0    1.7  1  AAA_24           AAA domain
  ------ inclusion threshold ------
       0.01   16.1   0.0      0.018   15.3   0.0    1.5  1  AAA_28           AAA domain
      0.011   15.9   0.0      0.031   14.4   0.0    1.8  1  Sigma54_activ_2  Sigma-54 interaction domain
      0.012   15.3   0.0      0.028   14.1   0.0    1.6  1  Sigma54_activat  Sigma-54 interaction domain
      0.015   15.2   0.1      0.036   14.0   0.1    1.7  1  Rad17            Rad17 P-loop domain
      0.017   15.7   0.0      0.044   14.3   0.0    1.9  1  ABC_tran         ABC transporter
      0.025   13.7   0.0      0.038   13.1   0.0    1.3  1  Parvo_NS1        Parvovirus non-structural protein NS1
      0.033   14.1   0.3       0.27   11.1   0.0    2.4  3  ATPase_2         ATPase domain predominantly from Archaea
      0.035   13.9   0.0       0.15   11.8   0.0    1.9  2  CPT              Chloramphenicol phosphotransferase-like prot
       0.05   12.9   0.2       0.25   10.6   0.0    2.1  2  Zeta_toxin       Zeta toxin
      0.053   12.7   0.0       0.12   11.5   0.0    1.5  1  DUF815           Protein of unknown function (DUF815)
      0.056   12.9   0.0       0.12   11.9   0.0    1.5  1  AAA_7            P-loop containing dynein motor region
      0.069   12.9   0.0       0.12   12.1   0.0    1.3  1  Viral_helicase1  Viral (Superfamily 1) RNA helicase
       0.08   12.1   0.1       0.56    9.3   0.0    2.2  3  NB-ARC           NB-ARC domain
      0.091   12.8   0.0       0.16   12.0   0.0    1.3  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
      0.095   12.0   0.0        1.4    8.2   0.0    2.3  2  ATPase           KaiC
      0.095   12.4   0.0        1.6    8.4   0.0    2.8  4  Guanylate_kin    Guanylate kinase
       0.11   12.2   0.3        7.9    6.2   0.0    2.5  2  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
       0.13   12.7   0.4        0.6   10.5   0.0    2.3  2  AAA_17           AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.3   0.0   9.7e-40     5e-37       1     131 [.     149     282 ..     149     283 .. 0.97

  Alignments for each domain:
  == domain 1  score: 127.3 bits;  conditional E-value: 9.7e-40
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLlteldgvkkk 99 
                 vllyGppG+GKT+laka+a+e+g+ f+++  s+l++k+ g+s+k +r++f+ a++ + p+i+fiDEida+ ++r+++e+e +  v ++++t +dg+++ 
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHESGACFINLHISTLTEKWYGDSNKLVRAVFSLARKLQ-PTIVFIDEIDAVLGQRRSGEHEASGMVKAEFMTLWDGLTSA 246
                 79******************************************************9.****************999*********************9 PP

                 .....SSTEEEEEEESSGGGSTHHHHSTTSSEEEETT CS
         AAA 100 .....eskvivigatnrpdkldpallrgRfdrkieie 131
                       +++iv+gatnr++++d+a+l +R+ +k+ ++
  KHJ34290.1 247 nktgsPARIIVLGATNRIQDIDEAIL-RRMPKKFPVS 282
                 99999889******************.7**9998775 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.0   6.7e-10   3.4e-07       2      39 ..     307     344 ..     307     350 .. 0.90

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 6.7e-10
   AAA_lid_3   2 vdlkeLAerTeGySGADlaalcreAallAlrrgikeit 39 
                 +d++ L + ++G+SG D+++ cr Aa++ +r+ ik+  
  KHJ34290.1 307 FDIDYLTKVMAGMSGSDIKEACRDAAMVPVREIIKTQR 344
                 589999999***********************999755 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   8.6e-07   0.00044      22      52 ..     144     171 ..     135     189 .. 0.80
   2 ?    3.9   0.0      0.12        61     122     146 ..     192     216 ..     188     239 .. 0.79

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 8.6e-07
      AAA_16  22 grpelvllsGesGvGKsslvrellralekdg 52 
                 + p+ vll+G++G+GK+ l+++l++   ++g
  KHJ34290.1 144 SAPSGVLLYGPPGCGKTMLAKALAH---ESG 171
                 46799*****************997...333 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.12
      AAA_16 122 llkrll.allsrderplvlvlDdlqw 146
                 +l r++ +l+++  +p+++++D+++ 
  KHJ34290.1 192 KLVRAVfSLARK-LQPTIVFIDEIDA 216
                 455555488888.667*******994 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       8.2   4.2e+03      63      87 ..     102     126 ..      48     143 .. 0.57
   2 !   24.7   0.0   3.8e-08   1.9e-05       5     102 ..     149     262 ..     146     278 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 8.2
      AAA_14  63 ekktylflDEiqevpewekalkslv 87 
                 +++  + +D i  ++++ + lk+ v
  KHJ34290.1 102 PDDIPVGFDDIGGLEDIIEELKESV 126
                 3455566666666666666666555 PP

  == domain 2  score: 24.7 bits;  conditional E-value: 3.8e-08
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev...................pewekalk 84 
                 +++ G+  +GKT+l+k l++e+      ++ + + + ++k + d++kl +++++++++ + t++f+DEi  v                    ++++ l 
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHESG---ACFINLHISTLTEKWYGDSNKLVRAVFSLARKLQPTIVFIDEIDAVlgqrrsgeheasgmvkaefMTLWDGLT 244
                 6899***************9998...66677777777777788888999999999777799*********99888888877777777766666666666 PP

      AAA_14  85 slvdegknldvivtGSns 102
                 s  ++g+  ++iv G  +
  KHJ34290.1 245 SANKTGSPARIIVLGATN 262
                 666666667777777655 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.073        38      28      92 ..      72     138 ..      26     145 .. 0.81
   2 !   17.6   0.0   7.6e-06    0.0039       1      26 [.     149     174 ..     149     257 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.073
  RNA_helicase  28 lkkkdsvysrnpeddfwdgYtgq...evvvidDfgqvkdeenps.dlaelirlvsstpyplnmasleek 92 
                   +k+++s+  +++ed ++d+Y++q   evv  dD++   d+      +  + +l +s+ ypl m +l ++
    KHJ34290.1  72 EKNAGSLRRKPKEDLVLDQYENQialEVVAPDDIPVGFDD--IGgLEDIIEELKESVIYPLTMPHLYSQ 138
                   45555665677788888****8866689999****99999..555888888999999999999988665 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 7.6e-06
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   ++lyGp+g+GK++lak La++    +
    KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHESGACF 174
                   689***************99876433 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   1.7e-07   8.7e-05      34      96 ..     147     217 ..     137     276 .. 0.70

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 1.7e-07
      RuvB_N  34 dhvllyGpPGlGkttlakiiakelgvklkits.gPvlek....agdlaalltnleek...dvlfideihrl 96 
                   vllyGpPG Gkt lak +a+e g+ +     +   ek    ++ l+  + +l +k    ++fidei  +
  KHJ34290.1 147 SGVLLYGPPGCGKTMLAKALAHESGACFINLHiSTLTEKwygdSNKLVRAVFSLARKlqpTIVFIDEIDAV 217
                 569********************987543322022223221114445544444443222269999999765 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.2   1.2e-06   0.00059       1      23 [.     148     170 ..     148     275 .. 0.78

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 1.2e-06
                 EEEEE--SSSSHHHHHHHGGGGB CS
       AAA_5   1 dvlLvGppGtgKselaerlaaal 23 
                 +vlL GppG+gK++la+ la+  
  KHJ34290.1 148 GVLLYGPPGCGKTMLAKALAHES 170
                 59*****************9954 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1      0.21   1.1e+02      26      81 ..      25      90 ..       9      99 .. 0.77
   2 !   18.2   0.0   5.4e-06    0.0028       1      44 [.     149     213 ..     149     259 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.21
      AAA_18 26 vnlrdvakenglllevdpe........aldeskrldedkldklldaleenss..aleegknlvidg 81
                ++ ++v+++  ll + d+e        a ++ +rld+ k ++ +d++e+n+   ++   ++lv+d+
  KHJ34290.1 25 YIAKSVVSNLPLLADSDKEqheqarlkAASNLRRLDQSKNNEFIDGNEKNAGslRRKPKEDLVLDQ 90
                566677777777777777767777777788888888989888999998888898888888888887 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 5.4e-06
      AAA_18   1 IlltGtpGvGKttlakeLskrl.gf....................gvnlrdvakenglllevdpe 44 
                 +ll G+pG+GKt lak+L+ +  ++                    ++ + ++a++ ++ + + +e
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHESgACfinlhistltekwygdsnklVRAVFSLARKLQPTIVFIDE 213
                 799***************88864557777777666666666666666666666666666665555 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.0   3.1e-07   0.00016       6     104 ..     149     241 ..     145     277 .. 0.79

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 3.1e-07
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTSEEEEETGGG----.---------HHHHHHHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegGivllDEidKihpk.essgadvSregVqrdLLqil 103
                 +ll gp g+Gkt+lakala    +     +i +  s+l+e  +     ++l+ a     ++ +  iv++DEid +  + +s +++ S+  V   ++ + 
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHESGA----CFINLHISTLTE--KWYGDSNKLVRAVFSLARKLQPTIVFIDEIDAVLGQrRSGEHEASG-MVKAEFMTLW 240
                 6899****************9995....9***********..5555556777777788899999*********999985555555554.4555555555 PP

                 H CS
       AAA_2 104 e 104
                 +
  KHJ34290.1 241 D 241
                 5 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0     1e-05    0.0052       8      29 ..     149     170 ..     144     200 .. 0.79
   2 ?    2.8   0.0      0.26   1.4e+02      74     106 ..     189     233 ..     177     268 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleql 29 
                 ++++G++G+GKT+l++ l+++ 
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHES 170
                 689***************9985 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.26
      AAA_22  74 sseellealeqalraravielliiDEaqh.lr...s.........e 106
                 +s  l++a+   +r+ +   ++ iDE++  l    s         +
  KHJ34290.1 189 DSNKLVRAVFSLARKLQP-TIVFIDEIDAvLGqrrSgeheasgmvK 233
                 566777888888888888.9********955355414444445443 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   1.7e-06   0.00089       2      33 ..     149     193 ..     149     265 .. 0.76

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 1.7e-06
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdt.............l 33 
                 vll G+pG+GK+ la+ l+ + ga++++  +             l
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHESGACFINLHIstltekwygdsnkL 193
                 7899*******************9998877655444444444442 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   2.2e-06    0.0011      41      71 ..     140     170 ..     115     218 .. 0.78

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 2.2e-06
   IstB_IS21  41 lsfiekkenivllGpsGvGKshlaialgvea 71 
                  s +++  +++l Gp+G GK+ la al++e 
  KHJ34290.1 140 SSLLSAPSGVLLYGPPGCGKTMLAKALAHES 170
                 566777889*******************984 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.1   3.9e-06     0.002      25      43 ..     149     167 ..     143     169 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 3.9e-06
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   +ll+GppG+GKtmlak+l+
    KHJ34290.1 149 VLLYGPPGCGKTMLAKALA 167
                   89**************986 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.1   6.4e-05     0.033      34      55 ..     147     168 ..     134     170 .. 0.86
   2 ?    0.7   0.0      0.65   3.4e+02     135     170 ..     199     233 ..     184     250 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 6.4e-05
      AAA_25  34 elallaGapgtGKttlaldlal 55 
                 + +ll+G+pg+GKt+la  la+
  KHJ34290.1 147 SGVLLYGPPGCGKTMLAKALAH 168
                 5689*************99986 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.65
      AAA_25 135 aaieevegvrlvviDplsralggdensnsdvgalve 170
                   +++  ++  v iD ++++lg     +++++ +v+
  KHJ34290.1 199 SLARK-LQPTIVFIDEIDAVLGQRRSGEHEASGMVK 233
                 44555.45999***********95555555544433 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0    0.0067       3.4      36      57 ..     147     168 ..     132     179 .. 0.85
   2 !    7.1   0.0    0.0062       3.2     104     146 ..     190     232 ..     179     234 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0067
        TniB  36 pnlllvGdsnnGKtmivekFar 57 
                 + +ll+G++ +GKtm+++  a+
  KHJ34290.1 147 SGVLLYGPPGCGKTMLAKALAH 168
                 679*************997765 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0062
        TniB 104 vskleqqvlrllrelkvrvLiiDEihnllagsarkqreflnal 146
                  +kl ++v +l r+l++ ++ iDEi+ +l  +++  +e+  ++
  KHJ34290.1 190 SNKLVRAVFSLARKLQPTIVFIDEIDAVLGQRRSGEHEASGMV 232
                 567888999*******************966666666665555 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0     3e-05     0.015       3      23 ..     149     169 ..     147     173 .. 0.91
   2 ?   -2.2   0.0       6.5   3.3e+03      63      93 ..     188     217 ..     177     235 .. 0.66

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 3e-05
                 EEEEC-TTTCHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklala 23 
                 v+l G++G+GKT+L++ la++
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHE 169
                 799**************9986 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 6.5
                 TS--SSS-CCHHHHCCSCCCEEEEEE-STT- CS
       NACHT  63 pepaapvsevwavllelperlLlilDglDel 93 
                  ++++ v+ v+++  +l+  +++i D +D +
  KHJ34290.1 188 GDSNKLVRAVFSLARKLQPTIVFI-DEIDAV 217
                 566777777777777777777775.554443 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   2.1e-05     0.011       5      75 ..     149     215 ..     146     286 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 2.1e-05
      AAA_24   5 iliyGpsgiGKTtlakel..gpkplfidtekGlksldadkfpdieswedfldevvelaaeladyktlviDtid 75 
                 +l+yGp+g GKT+lak l  +  + fi++  ++  ++ + +++     +++ +v +la++l+   +++iD id
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALahESGACFINLHIST-LTEKWYGDSN----KLVRAVFSLARKLQ-PTIVFIDEID 215
                 79****************988888888887755.5566666533....33333333333333.2344444444 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   0.0   3.5e-05     0.018       2      27 ..     149     174 ..     148     229 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.5e-05
      AAA_28   2 ivitGgestGKTtlleaLaargypvv 27 
                 + + G++++GKT l++aLa +   ++
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHESGACF 174
                 6799***************8744443 PP

>> Sigma54_activ_2  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0     6e-05     0.031      17      47 ..     142     172 ..     131     220 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 6e-05
                      HHT-SS-EEEEEETT--HHHHHHCC--TTS- CS
  Sigma54_activ_2  17 aaqsklpvfltGekGsgkelvArlLhknsgp 47 
                      + ++ + v+l G++G+gk++ A++L+++sg 
       KHJ34290.1 142 LLSAPSGVLLYGPPGCGKTMLAKALAHESGA 172
                      5567788********************9986 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   5.5e-05     0.028       8      47 ..     132     171 ..     128     187 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 5.5e-05
                      HHHHHHHHHHHCTSSS-EEEECSTTSSHHHHHHHHHHHST CS
  Sigma54_activat   8 lkelleqikkvaktdlsvlitGesGtGKellaraiheask 47 
                      + +l++q +++ + ++ vl+ G  G+GK++la+a+ ++s 
       KHJ34290.1 132 MPHLYSQSSSLLSAPSGVLLYGPPGCGKTMLAKALAHESG 171
                      567788899999999******************9976654 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   7.1e-05     0.036      48      75 ..     149     176 ..     135     218 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 7.1e-05
       Rad17  48 LLisGPsGCgkstvvkvLskelgiklre 75 
                 +L+ GP+GCgk+   k L+ e g  +++
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHESGACFIN 176
                 4678****************99987665 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   8.6e-05     0.044       9      36 ..     144     171 ..     136     302 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 8.6e-05
                 ETTSEEEEEESTTSSHHHHHHHHTTSS- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   9 kegekvaivGenGaGKStLlkllagllk 36 
                 ++ + v + G+ G+GK+ L+k+la+++ 
  KHJ34290.1 144 SAPSGVLLYGPPGCGKTMLAKALAHESG 171
                 55566899***************99864 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   7.3e-05     0.038     117     137 ..     149     169 ..      79     174 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 7.3e-05
   Parvo_NS1 117 vwfyGpantGktnlaeaIaka 137
                 v++yGp+ +Gkt+la+a+a+ 
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHE 169
                 89*****************96 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       4.7   2.4e+03      55      79 ..      54      79 ..      36     100 .. 0.59
   2 ?   11.1   0.0   0.00052      0.27      23      43 ..     149     169 ..     144     182 .. 0.87
   3 ?   -1.4   0.0       3.5   1.8e+03     110     131 ..     197     218 ..     179     247 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 4.7
    ATPase_2 55 ialreesiskldefie.eeeekkkle 79
                ++lr+ ++sk +efi+ +e+++ +l+
  KHJ34290.1 54 SNLRRLDQSKNNEFIDgNEKNAGSLR 79
                45555556666666555333333333 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00052
    ATPase_2  23 yfiYGpegsGKtaLlkeiien 43 
                 +++YGp g+GKt L k ++ +
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHE 169
                 679************998765 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 3.5
    ATPase_2 110 lekikkkgkkiiiiiDelqkli 131
                   ++ +k +  i++iDe+  + 
  KHJ34290.1 197 VFSLARKLQPTIVFIDEIDAVL 218
                 4455666666899999987665 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0    0.0003      0.15       4      40 ..     149     185 ..     147     205 .. 0.93
   2 ?   -1.1   0.0       2.8   1.4e+03      62      87 ..     326     351 ..     296     354 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.0003
                 EEEEE-TTSSHHHHHHHHHHHSSS-EEEEEHHHHHHH CS
         CPT   4 ilLnGgsssGKsslaralqevldepwlhlgvDafvea 40 
                 +lL G +  GK+ la+al + + +++++l + +++e+
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHESGACFINLHISTLTEK 185
                 89****************************9998875 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 2.8
                 -HHHHHHHHHHHHHHHHHHHTT-EEE CS
         CPT  62 gpeldlllaalyeavaamaraGnnvi 87 
                 ++ +d+++  ++e ++   ++G n++
  KHJ34290.1 326 EACRDAAMVPVREIIKTQREQGVNIV 351
                 56666667777777777777777776 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       1.5   7.9e+02     155     178 ..      41      64 ..      39      77 .. 0.86
   2 ?   10.6   0.0    0.0005      0.25      14      40 ..     144     170 ..     135     181 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.5
  Zeta_toxin 155 pkeehdeafeglresvealeeekq 178
                 +ke+h++a  ++++++++l+++k 
  KHJ34290.1  41 DKEQHEQARLKAASNLRRLDQSKN 64 
                 799****************99884 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.0005
  Zeta_toxin  14 erPklillgGqpGAGKselaellkdel 40 
                 + P  +ll G pG+GK+ la++l+ e 
  KHJ34290.1 144 SAPSGVLLYGPPGCGKTMLAKALAHES 170
                 578999****************99986 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00024      0.12      55     115 ..     148     213 ..     135     217 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00024
      DUF815  55 nvLLwGarGtGKSslvkallneyaeeg..Lrlievekedlkelpklvellrerper...filfvDD 115
                  vLL+G  G+GK  l kal +e  +    L++  ++++   + +klv+++ + +++    i+f+D 
  KHJ34290.1 148 GVLLYGPPGCGKTMLAKALAHESGACFinLHISTLTEKWYGDSNKLVRAVFSLARKlqpTIVFIDE 213
                 69******************9988776557777788777777777777765444431126888886 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00024      0.12      28      58 ..     141     171 ..     131     199 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00024
       AAA_7  28 lllknkkpvllvGptGtGKtviikdllkkld 58 
                  ll++   vll+Gp G+GKt+++k l ++  
  KHJ34290.1 141 SLLSAPSGVLLYGPPGCGKTMLAKALAHESG 171
                 57788889***************99877654 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00023      0.12       5      71 ..     153     214 ..     149     221 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00023
  Viral_helicase1   5 GvpGcGKStlirkllrts..liltvnrptaelltegkpklpnlsvrtvdsflmalvkstkgkililDEy 71 
                      G pGcGK+ l + l+++s  + +  n     l  ++  ++++l vr v s+  +l ++    i+++DE+
       KHJ34290.1 153 GPPGCGKTMLAKALAHESgaCFI--NLHISTLTEKWYGDSNKL-VRAVFSLARKLQPT----IVFIDEI 214
                      78***************865333..444345666666666555.88888877777665....9999997 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       1.4   7.1e+02      59     102 ..      17      62 ..      12      68 .. 0.70
   2 ?    9.3   0.0    0.0011      0.56      23      43 ..     149     169 ..     140     180 .. 0.87
   3 ?   -2.7   0.0         5   2.6e+03     195     212 ..     249     266 ..     244     286 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.4
                 EESXXHHHHHHHXXHHHHHCCCTTSSSS-STTS..HHHHHHHHCCC CS
      NB-ARC  59 vsktdkseeiletilkeLslseddleekeeves..lkrklvrlLlt 102
                 v  +++ + i ++++ +L l  d ++e++e+    ++ +l+rl ++
  KHJ34290.1  17 VVSSFSMYYIAKSVVSNLPLLADSDKEQHEQARlkAASNLRRLDQS 62 
                 555788999999*****98887766666666555566677766555 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0011
                 EEEEESTTSSHHHHHHHHCCS CS
      NB-ARC  23 valvGmgGvGKttlakqilnk 43 
                 v l+G +G+GKt lak   ++
  KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHE 169
                 679************998877 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 5
                 TT-HHHHHHHHHHHC-TC CS
      NB-ARC 195 kGlPlalkvlggllstkk 212
                  G+P+ ++vlg++ + ++
  KHJ34290.1 249 TGSPARIIVLGATNRIQD 266
                 588999999998877654 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   0.00031      0.16      20      44 ..     147     171 ..     117     183 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00031
                 EEEEEEESTTSSHHHHHHHHHHHTT CS
        TsaE  20 dvilLeGdLGaGKTtlvrglakalg 44 
                 + +lL+G+ G+GKT+l+++la++ g
  KHJ34290.1 147 SGVLLYGPPGCGKTMLAKALAHESG 171
                 349*****************99876 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0    0.0028       1.4      21      38 ..     148     165 ..     112     173 .. 0.86
   2 ?    1.2   0.0      0.37   1.9e+02     103     132 ..     189     220 ..     173     251 .. 0.67

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0028
      ATPase  21 vvlitGepGtGKtifalq 38 
                  vl++G pG+GKt++a+ 
  KHJ34290.1 148 GVLLYGPPGCGKTMLAKA 165
                 689************986 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.37
      ATPase 103 dleelieelaeaikeikakrvviDsitgl..a 132
                 d ++l++ + +  ++++ + v iD i+++  +
  KHJ34290.1 189 DSNKLVRAVFSLARKLQPTIVFIDEIDAVlgQ 220
                 56677777888888888888888888876432 PP

>> Guanylate_kin  Guanylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0    0.0031       1.6       5      39 ..     149     184 ..     146     192 .. 0.88
   2 ?    0.3   0.0      0.97   4.9e+02      72      96 ..     180     207 ..     167     226 .. 0.76
   3 ?   -1.8   0.0       4.2   2.1e+03     111     130 ..     202     220 ..     189     236 .. 0.68
   4 ?   -0.5   0.0       1.6   8.4e+02       5      36 ..     255     285 ..     252     292 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0031
                    EEEESTTTSSHHHHHHHHHHHSTTTEE.E--EEESS CS
  Guanylate_kin   5 vvlvgpsgaGksslkkaLlselpekfg.vsvshtTr 39 
                    v l gp g Gk +l kaL +e    f  + +s  T 
     KHJ34290.1 149 VLLYGPPGCGKTMLAKALAHESGACFInLHISTLTE 184
                    6899********************995599998885 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.97
                    EEETTEEEEEEHHHHHHHHHTTSE...E CS
  Guanylate_kin  72 aefsgnlygtsveaieevlekgki...v 96 
                    ++ +++ yg s + +++v+  +++    
     KHJ34290.1 180 STLTEKWYGDSNKLVRAVFSLARKlqpT 207
                    5667888999999999998888764441 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 4.2
                    TTTTEEEEEEEESSHHHHHH CS
  Guanylate_kin 111 aelspiivFikppslkelqr 130
                     +l+p ivFi  + + +l +
     KHJ34290.1 202 RKLQPTIVFI-DEIDAVLGQ 220
                    47999****9.334444444 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 1.6
                    EEEESTTTSSHHHHHHHHHHHSTTTEEE--EE CS
  Guanylate_kin   5 vvlvgpsgaGksslkkaLlselpekfgvsvsh 36 
                    ++++g++    + + +a+l++ p+kf vs ++
     KHJ34290.1 255 IIVLGAT-NRIQDIDEAILRRMPKKFPVSLPN 285
                    6777887.44577999**********999886 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0       0.1        52       3      20 ..     150     167 ..     149     179 .. 0.91
   2 ?    6.2   0.0     0.015       7.9     244     268 ..     193     216 ..     190     218 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.1
      AAA_21   3 vliGpNgsGKSnLLdald 20 
                 +l+Gp g+GK+ L +al 
  KHJ34290.1 150 LLYGPPGCGKTMLAKALA 167
                 79**************95 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.015
      AAA_21 244 llalltallralkkgsllliDEpEn 268
                 l + + +l+r l++ ++++iDE+++
  KHJ34290.1 193 LVRAVFSLARKLQP-TIVFIDEIDA 216
                 668899********.********95 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       8.1   4.1e+03      53      79 ..      44      71 ..      34      98 .. 0.55
   2 ?   10.5   0.0    0.0012       0.6       1      24 [.     152     175 ..     152     182 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 8.1
                HHHHHHHHHHHHHHHHH.HSSEEEEEE- CS
      AAA_17 53 ekkelqkeaaekiaeea.kkkgvlvdgh 79
                + ++ + +aa ++++ + +k++  +dg 
  KHJ34290.1 44 QHEQARLKAASNLRRLDqSKNNEFIDGN 71
                3444444444445444423333455543 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.0012
                 EE-TTSSHHHHHHHHHHHHTEEEE CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthl 24 
                 +G+PG+GK+ +++ l+++ g  ++
  KHJ34290.1 152 YGPPGCGKTMLAKALAHESGACFI 175
                 7***************99886555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (409 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       672  (0.0374812); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        92  (0.00513135); expected 17.9 (0.001)
Passed Fwd filter:                        35  (0.00195214); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              35  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 2852.32
//
Query:       KHJ34291.1  [L=1258]
Description: putative vacuolar assembly protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.2e-20   71.1   5.3    2.4e-18   66.4   1.5    3.7  3  Clathrin   Region in Clathrin and VPS
  ------ inclusion threshold ------
       0.01   16.1   0.2      0.074   13.3   0.2    2.5  2  Vps39_1    Vacuolar sorting protein 39 domain 1
       0.36   10.8   2.8       0.95    9.5   2.8    1.8  1  zf-RING_5  zinc-RING finger domain


Domain annotation for each model (and alignments):
>> Clathrin  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.02   1.2e+02      39      86 ..     746     794 ..     738     799 .. 0.82
   2 ?    0.2   0.0      0.11   6.4e+02      74     113 ..     816     855 ..     809     880 .. 0.83
   3 !   66.4   1.5   4.1e-22   2.4e-18       7     142 ..     901    1053 ..     896    1054 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.02
                 S--HHHHHHHHHHHHHTT-HHHHHHTTS..S---S-TTHHHHHHHT-SSH CS
    Clathrin  39 kenpalqtallelyakyddpqeleeflk..knnnydlekvaklcekadly 86 
                 + n+++++ +l  y+  ++  ++ + l+  + + yd+++v +++e++ +y
  KHJ34291.1 746 PINSEIYEIILGHYIAQNR-PKAKSLLErwSIDLYDIKRVTNILENQLKY 794
                 5678999999999999997.9*******656666***********98766 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.11
                 THHHHHHHT-SSHHHHHHHHHTTXTHSSHSSXSSSSHCSC CS
    Clathrin  74 ekvaklcekadlyeeavilykkinefkkaisllkklkdfd 113
                 e++++l    +  +e++ +y k++  + a+++++++++ d
  KHJ34291.1 816 ESLGRLYLADGHPRESIKCYIKLQYADTALNMIREHHLVD 855
                 6677777778888999999999999999999988877766 PP

  == domain 3  score: 66.4 bits;  conditional E-value: 4.1e-22
                  TS-CCCCHHHHHCTT-HHHHCHHHCCHH.........HCHTS.......--HHHHHHHHHHHHHT....T-HHHHHHTTSS---S-TTHHHHHHHT- CS
    Clathrin    7 pidlsrvvklfeeaglleelleyLekvl.........kedsk.......enpalqtallelyaky....ddpqeleeflkknnnydlekvaklceka 83  
                   i+ s vv++++e++++ +l+ yL ++          +   +       +++ l ++ ++l +      d+ + l++flk+++ y  ek+   cek+
  KHJ34291.1  901 LISPSVVVQQLQEKEMPLYLYFYLSALWkgdgigehqS---EsrekllqDSKVLVDQFADLVVHLfsiyDR-DLLMAFLKSSTMYTFEKATYECEKR 993 
                  5778999******************9996666665541...133556665555555555555544555486.9************************ PP

                  SSHHHHHHHHHTTXTHSSHSSX.SSSSHCSCHHHHTTTTTXXSHHHHHHHHHHHSSXSHH CS
    Clathrin   84 dlyeeavilykkinefkkaisl.lkklkdfddaieyaakvsnpelwekllealldkkpfe 142 
                  + + e+v+ly+k +++k+a+ l +++l d  +ai +a+++++++lwe+ll++++dk++f+
  KHJ34291.1  994 EFIPELVYLYSKTGQTKRALYLiIDRLTDVSQAISFAKEQNDSDLWEDLLNYSMDKPNFI 1053
                  *********************99**********************************986 PP

>> Vps39_1  Vacuolar sorting protein 39 domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.88   5.2e+03      19      55 ..     694     732 ..     688     735 .. 0.67
   2 ?   13.3   0.2   1.2e-05     0.074       8      68 ..     962    1022 ..     941    1051 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.88
     Vps39_1  19 pLlrleNaCdlk.dveeiLkkekkykeLid.lYygkklh 55 
                 +L++++ + +   ++ ++Lk ++++++ i+ ++  kk +
  KHJ34291.1 694 KLIKINDWTAAGiVCGKVLKTAQQWEKFIHsFFTAKKFD 732
                 566666554444156799*******99986366666655 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 1.2e-05
     Vps39_1    8 vYlktkpklvgpLlrleNaCdlkdveeiLkkekkykeLidlYygkklheeALeLlkelade 68  
                  ++  ++++l++ +l+ +   ++++     +k++ + eL+ lY + ++ ++AL L+++   +
  KHJ34291.1  962 LFSIYDRDLLMAFLKSSTMYTFEKATYECEKREFIPELVYLYSKTGQTKRALYLIIDRLTD 1022
                  566789999*********************************************9876663 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   2.8   0.00016      0.95       1      33 [.    1171    1205 ..    1171    1253 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00016
   zf-RING_5    1 hCnkCfekl..skeekfyltsCgHifCekClkkll 33  
                  hC  C+e++  +++e  +  +CgH+ + ++l  + 
  KHJ34291.1 1171 HCVGCHEPFteQETEILVGFTCGHMWHLSHLLSYR 1205
                  9********8888888********99988887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       686  (0.038262); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.81u 0.23s 00:00:01.04 Elapsed: 00:00:00.40
# Mc/sec: 9498.04
//
Query:       KHJ34292.1  [L=421]
Description: putative family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.3e-49  166.2   0.0    1.4e-48  165.3   0.0    1.5  1  DUF155    Uncharacterised ACR, YagE family COG1723
  ------ inclusion threshold ------
      0.035   14.4   0.0       0.15   12.3   0.0    2.1  2  Nif11     Nif11 domain
      0.077   12.8   0.2        1.5    8.6   0.0    2.6  2  DUF3708   Phosphate ATP-binding cassette transporter
       0.18   11.4   0.0       0.33   10.6   0.0    1.4  1  Cupin_1   Cupin


Domain annotation for each model (and alignments):
>> DUF155  Uncharacterised ACR, YagE family COG1723
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.3   0.0   3.1e-52   1.4e-48       1     176 []     177     367 ..     177     367 .. 0.97

  Alignments for each domain:
  == domain 1  score: 165.3 bits;  conditional E-value: 3.1e-52
      DUF155   1 vfiFknGsvVfwgldeeeeknflnkllkflneeselpreeeqeteeleyvydeqsessrikgdvivlksk..............slleklaiShalaqS 85 
                 +f+F++Gs V w l+e+ ++++++k l  ++ +   p+ +++e e+ley++d+++e+s+ik dvi+l++k               +l+k+a+S++la+S
  KHJ34292.1 177 IFVFPSGSLVAWSLPEDVVSDLATKTLLPATVN---PHMDQMEMEDLEYIEDPKRENSSIKADVITLGTKptsysveiandridATLAKIAFSSGLARS 272
                 7************************99998876...8999999************************9999**************************** PP

      DUF155  86 vkLdvlEesldellestekipkelakkgklklsrkellkktgellslrinlnlkselldt.PdffW...eepeleslyeavseyleikeRikiLn 176
                 +kL+vlE++l +++est+ ipk l+k+++l+++r+++l+ktgell+lr++ln++sel+d+ Pd+fW   +e  le++y++v + l+++ Rik+Ln
  KHJ34292.1 273 TKLAVLETMLLKYFESTRIIPKLLSKNSRLPFNRRFMLQKTGELLELRAQLNHYSELTDSlPDLFWdsrHELGLEGYYDQVGRSLDVGIRIKTLN 367
                 ******************************************************************887789**********************9 PP

>> Nif11  Nif11 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.4e-05      0.15      19      46 ..     130     157 ..     119     157 .. 0.84
   2 ?   -3.1   0.0       2.3     1e+04      38      47 ..     403     412 ..     398     412 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.4e-05
       Nif11  19 lreqlkacsdheevvalAkeaGyeftee 46 
                 +++ +++  d e+vv++ +++G++++++
  KHJ34292.1 130 IATSVADQFDMEAVVRILRSHGFQIDPD 157
                 5667777789***************986 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.3
       Nif11  38 eaGyefteee 47 
                 e G+e  +e+
  KHJ34292.1 403 EVGFELRREW 412
                 679**99998 PP

>> DUF3708  Phosphate ATP-binding cassette transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.071   3.2e+02      60     143 ..      58     139 ..      54     151 .. 0.75
   2 ?    8.6   0.0   0.00033       1.5      66     146 ..     184     259 ..     182     279 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.071
     DUF3708  60 qpsvieslvaaelpeavlalsegqrqllledvrniaegldaLsaaeaealkatadeirallaavgvalgtevtpavva..aaahlr 143
                 q  +++s++ +e p+ v++ ++++ +   + vr+ a+         + a++a++++  + l+++ ++l ++ ++ v+a  +a +++
  KHJ34292.1  58 QRFYSDSTTHQETPNPVESGKKTSPTSKRKLVRSPARKSSL----RRVAVEAQRSREGTKLKSKDAILESNENSRVIAtsVADQFD 139
                 55677888888888888888888888888888888877777....45566778888899999999999999999999887776664 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00033
     DUF3708  66 slvaaelpeavlalsegqrqllledvrniaegldaLsaaeaealkatadeirallaavgvalgtevtpavvaaaahlrarq 146
                 slva +lpe+v++   ++ +ll   v+   + +++   +++e+++   ++ ++ ++a+ + lgt++t++ v++a++  +++
  KHJ34292.1 184 SLVAWSLPEDVVSDL-ATKTLLPATVNPHMDQMEM---EDLEYIED-PKRENSSIKADVITLGTKPTSYSVEIANDRIDAT 259
                 578889999988877.8889999999998888877...99999995.5555666666669************998755554 PP

>> Cupin_1  Cupin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   7.3e-05      0.33      76      99 ..     164     188 ..     126     207 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 7.3e-05
                 .EEEEEE.EETTEEEEE-TT-EEEE CS
     Cupin_1  76 nrdfhkk.lreGdvfvvPaglvhfq 99 
                 +++ h + ++ Gd+fv+P+g  +++
  KHJ34292.1 164 EQVVHTRgVNNGDIFVFPSGSLVAW 188
                 67888889************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       807  (0.0450109); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3115.68
//
Query:       KHJ34293.1  [L=280]
Description: putative smad fha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-14   54.3   0.1    3.3e-14   53.0   0.1    1.8  1  FHA           FHA domain
  ------ inclusion threshold ------
      0.012   15.9   0.0       0.14   12.5   0.0    2.2  1  Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic d


Domain annotation for each model (and alignments):
>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.0   0.1   3.7e-18   3.3e-14       1      68 [.     187     265 ..     187     266 .. 0.91

  Alignments for each domain:
  == domain 1  score: 53.0 bits;  conditional E-value: 3.7e-18
                 EEEESS.TTSSEETTSTTSTTTEEEEEEETT..........CEEEEEEEESSSSSEEETTEEESTTSEEEE-TTEEEEE CS
         FHA   1 vtiGRs.sdcdivlddpsiSrkHalikfdkg..........sgkvyleDlgSknGtfvNgqrigkgepveLksgdviel 68 
                 + +GR+ +  d+  ++ps+S++Ha+i+f+            + k y++Dl+S+nGt +N++ i+k+++ eL+++d++++
  KHJ34293.1 187 WLVGREqAIVDVFSEHPSVSKQHAVIQFRYIqkseigvqsgRVKPYIIDLDSSNGTSLNKEEIPKSRYLELRNKDILQF 265
                 679***667899999***********66555567999**9999**********************************99 PP

>> Yop-YscD_cpl  Inner membrane component of T3SS, cytoplasmic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.6e-05      0.14       2      74 ..     169     258 ..     168     266 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.6e-05
                   EECCCCTT-EEEE.TTEEEEEES-TT.-SEE---TTS-TT-EEEEEE...TTEEEEE.........E-CESS--EETTEE-SECC...-- CS
  Yop-YscD_cpl   2 vlsGpdkGaeveL.eegevviGsded.cDivLsDkevsrkhlkLeve...eesvrle.........dlgsrngllvngerveele...lr 74 
                   v +G+d  +++eL ++  +++G+++   D+  + ++vs++h++++++   ++++ ++         dl+s ng+ +n+e++ ++    lr
    KHJ34293.1 169 VFKGSDILETIELnRKSCWLVGREQAiVDVFSEHPSVSKQHAVIQFRyiqKSEIGVQsgrvkpyiiDLDSSNGTSLNKEEIPKSRyleLR 258
                   678889999999*5556689***********************98753334554433222223333788888888888888755443455 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1001  (0.0558313); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2219.93
//
Query:       KHJ34294.1  [L=620]
Description: putative lectin c-type domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (620 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.22s 00:00:00.80 Elapsed: 00:00:00.39
# Mc/sec: 4744.70
//
Query:       KHJ34295.1  [L=979]
Description: putative snare-dependent exocytosis protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   3.5e-107  358.5   0.0   7.7e-107  357.4   0.0    1.6  2  Lgl_C        Lethal giant larvae(Lgl) like, C-terminal
    4.6e-05   23.6   0.1         28    5.1   0.0    5.7  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    6.6e-05   22.4   0.0     0.0014   18.1   0.0    2.3  2  WD40_like    WD40-like domain
    0.00014   22.6   2.6       0.11   13.5   0.0    5.6  6  WD40         WD domain, G-beta repeat
     0.0013   17.5   0.0        5.1    5.6   0.0    3.3  3  Nup160       Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> Lgl_C  Lethal giant larvae(Lgl) like, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0      0.79   2.8e+03     253     291 ..     365     401 ..     359     403 .. 0.71
   2 !  357.4   0.0  2.1e-110  7.7e-107       2     393 .]     508     896 ..     507     896 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.79
                 SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT CS
       Lgl_C 253 edellcsaisvvkteekkkgivlvaltkdgevkvlslPs 291
                 + +l+ ++  +  + + ++  +l+al ++ge+  ls P+
  KHJ34295.1 365 DFCLIPKSSPH--YAGAQDPLALIALLSSGELVTLSYPD 401
                 55555554444..345678899***********999996 PP

  == domain 2  score: 357.4 bits;  conditional E-value: 2.1e-110
                 --EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE---S-SEEEEEE-BTSEE CS
       Lgl_C   2 vevksvslaaetlElavaletGeVvvfkfgknknfknkeksgaleleqkrlqlknskeklldisdrakpslkegflPvtllnlkqgevsalkvSniGFv 100
                 ++++s s++++t+Elav++ tG+Vvv+ +g nk ++ +e++++++            + l+dis r +p+l+eg+ P  l ++ qg ++++k SniGF 
  KHJ34295.1 508 INITSLSMGSYTGELAVGTDTGKVVVYNWGINKLYG-RESPQGVQS---------IVGGLVDISFRSEPTLQEGLNPRWLYDMSQGSITIVKTSNIGFL 596
                 78**********************************.888888874.........49****************************************** PP

                 EEEETTSEEEEEETTTTEEEEEEEGGG............T-SS----EEE..............EEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEEE- CS
       Lgl_C 101 AigyesgslviiDlRGPaviynenise..........kllskeksskvtt..............ieFsvmelggdgyssilllvGtnkGelltfkilPe 175
                 Aig esg + iiDlRGP +i+  n++e          +          +               ieF++++l+gd yssi ++vGt  G++l fki P+
  KHJ34295.1 597 AIGAESGGFSIIDLRGPTIILCLNLNEltkpnkqssfR----------KIktgnspatqdwpivIEFGILTLDGDSYSSITCFVGTFYGNVLSFKIFPD 685
                 ***************************65555444322..........2233555556789************************************** PP

                 GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEE CS
       Lgl_C 176 ssGrfevefadktaaddskilkiasieketgesalAtiskmqklskglvveglvvatskkdirvikpakskethksfedellcsaisvvkteekkkgiv 274
                  +G ++++fa+      +ki++i +i  ++ge a At++++ +l+ g + +gl+va+s++++r++kpa +k++hk f+    c+ + v+ +e+  +g +
  KHJ34295.1 686 RDGIYTAQFAGLS-SLADKIISITPIIGDSGELAEATGEAVRELGSGKQTHGLLVAVSQTEVRIFKPAIAKGAHKGFDG-FFCETARVIAIED--RGFA 780
                 ***********99.9999***********************************************************98.99******98776..**** PP

                 EEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-TTS-EEEE-SSSEEEEEEEES----..------B---TT----------TTTS-SS-- CS
       Lgl_C 275 lvaltkdgevkvlslPsLkeikkvklpealdarrlsessilrnGdilvrlgkleaallsvlgksktskeeeetdtlynekaaipprPqvsslqWirGtq 373
                 lv ++ d +v+v+s+P+Lke+++vk+p a d +r+s s++ + G+i+ ++g++e+a+++v+g s++    +++d+l+ +++ ipprP++s+l+Wi+Gtq
  KHJ34295.1 781 LVGIFGDATVRVFSIPGLKELNSVKIP-AFDVSRISASVVTQGGSIFGWTGPSELAMMCVWGTSQP--LLPSDDKLICPQNTIPPRPTISNLEWISGTQ 876
                 **************************5.799********************************999..******************************* PP

                 ---HHHHHHHHH-TT----S CS
       Lgl_C 374 yvskedLdlLigGpnRppsk 393
                  +s++d dlLigGp+Rp  k
  KHJ34295.1 877 FLSPNDFDLLIGGPDRPTGK 896
                 ****************9866 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.029     1e+02      38      89 ..      36      90 ..      30      93 .. 0.73
   2 ?   -3.4   0.0       3.5   1.2e+04      37      62 ..     172     198 ..     137     203 .. 0.58
   3 !    5.1   0.0    0.0079        28      35      81 ..     231     277 ..     220     305 .. 0.77
   4 ?    4.0   0.0     0.017        62      44      82 ..     459     497 ..     451     537 .. 0.80
   5 ?   -4.1   0.0         5   1.8e+04      52      68 ..     595     611 ..     590     621 .. 0.81
   6 ?    2.6   0.0     0.049   1.7e+02      35      67 ..     719     751 ..     703     760 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.029
  ANAPC4_WD40 38 dsevrsLaWkpdgklLavaysdgev...rlldaesgkvvhslsvksekavtclgW 89
                 +s++++L++ p  +lLa+++++++    +++   +++v  +++ ++ ++v+ + +
   KHJ34295.1 36 NSQISCLEYDPVQSLLAIGTKESKFgsgQIYVFGQQRVQVTFQLSRPSSVQLIRF 90
                 6799****************99754222666666667777777777766777666 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 3.5
  ANAPC4_WD40  37 edsevrsLaWkpdg.klLavaysdgev 62 
                  + s v s++ +p++   L ++ys+g+v
   KHJ34295.1 172 RVSPVVSIKLHPKDiGQLLIGYSEGAV 198
                  344455555555442345567777765 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.0079
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  + ++ + ++  W p+gk+   +y++  +++ d+++g++++s s  ++
   KHJ34295.1 231 KFKKPSLTHTIWCPSGKFVGTVYDNCVLNFWDSKDGRILRSKSLLEK 277
                  55667788889***************************998766544 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.017
  ANAPC4_WD40  44 LaWkpdgklLavaysdgevrlldaesgkvvhslsvksek 82 
                  L+ + d ++   a+ dg++r+ d+   ++++++++ + +
   KHJ34295.1 459 LKCSGDRNIVLAAHGDGTIRIWDSGRIDLIENSKILQVD 497
                  566678888999999999999999998888888776655 PP

  == domain 5  score: -4.1 bits;  conditional E-value: 5
  ANAPC4_WD40  52 lLavaysdgevrlldae 68 
                  +La++ + g  +++d  
   KHJ34295.1 595 FLAIGAESGGFSIIDLR 611
                  79999999999999876 PP

  == domain 6  score: 2.6 bits;  conditional E-value: 0.049
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrllda 67 
                  +++++ vr+L   ++ + L va+s++evr+++ 
   KHJ34295.1 719 EATGEAVRELGSGKQTHGLLVAVSQTEVRIFKP 751
                  678999************************975 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.0   3.8e-07    0.0014      81     185 ..      35     149 ..      20     208 .. 0.86
   2 ?    1.6   0.0     0.038   1.4e+02      91     110 ..     518     537 ..     474     546 .. 0.80

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 3.8e-07
   WD40_like  81 ieedistvkv..iddklliGtnk.....GsiyvfskdlqleevllgqsseIkeikiennkiysLse.safivfdlfsqnieykisvkdikt.feiienk 170
                 i+ +is+ ++  ++  l+iGt++     G+iyvf ++   ++  l++ s ++ i    n++ sLs+ +++ v+dl +++++  i   +i+t +e+ +  
  KHJ34295.1  35 INSQISCLEYdpVQSLLAIGTKEskfgsGQIYVFGQQRVQVTFQLSRPSSVQLIRFCANRLISLSSkNELSVWDLATKRKLSSITPPGITTaIETDPTL 133
                 8999999988335899*****84444449********77777789*******************8625799*********9999999987624555888 PP

   WD40_like 171 dillig.tegeililk 185
                 d  +ig ++g+ili+ 
  KHJ34295.1 134 DWAFIGlQNGRILIYD 149
                 8888883467788875 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.038
   WD40_like  91 iddklliGtnkGsiyvfskd 110
                   ++l++Gt++G++ v++  
  KHJ34295.1 518 YTGELAVGTDTGKVVVYNWG 537
                 56799************966 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.91   3.3e+03      12      29 ..      38      55 ..      31      67 .. 0.82
   2 ?    0.4   0.0       0.4   1.4e+03      13      38 .]     123     149 ..     112     149 .. 0.85
   3 ?    2.0   0.1      0.12   4.4e+02      13      38 .]     237     262 ..     220     262 .. 0.71
   4 !   13.5   0.0   2.9e-05      0.11      17      38 .]     457     481 ..     441     481 .. 0.81
   5 ?   -2.5   0.0       3.3   1.2e+04      13      38 .]     510     535 ..     505     535 .. 0.68
   6 ?   -1.5   0.0       1.5   5.5e+03      12      24 ..     665     677 ..     655     707 .. 0.52

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.91
                SEEEEEEETTSSEEEEEE CS
        WD40 12 svtslafspdgawlasGs 29
                 +++l ++p +++la G+
  KHJ34295.1 38 QISCLEYDPVQSLLAIGT 55
                399**9***999999986 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.4
                 E.EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 v.tslafspdgawlasGsdDgtvriWd 38 
                 + t++ ++p  +w + G  +g + i+d
  KHJ34295.1 123 ItTAIETDPTLDWAFIGLQNGRILIYD 149
                 6689999******989*99****9998 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.12
                 EEEEEEETTSSEEEEE..ETTSEEEEEE CS
        WD40  13 vtslafspdgawlasG..sdDgtvriWd 38 
                  t+  ++p+g+++  G   d++ + +Wd
  KHJ34295.1 237 LTHTIWCPSGKFV--GtvYDNCVLNFWD 262
                 566669******7..7335899999998 PP

  == domain 4  score: 13.5 bits;  conditional E-value: 2.9e-05
                 E...EETTSSEEEEEETTSEEEEEE CS
        WD40  17 a...fspdgawlasGsdDgtvriWd 38 
                 +    s d + +++++ Dgt+riWd
  KHJ34295.1 457 KplkCSGDRNIVLAAHGDGTIRIWD 481
                 44447889999999*88*******9 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 3.3
                 EEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtsla.fspdgawlasGsdDgtvriWd 38 
                 +tsl+  s  g + a G+d g+v +++
  KHJ34295.1 510 ITSLSmGSYTGEL-AVGTDTGKVVVYN 535
                 7888755555555.6699888888876 PP

  == domain 6  score: -1.5 bits;  conditional E-value: 1.5
                 SEEEEEEETTSSE CS
        WD40  12 svtslafspdgaw 24 
                 s+t++    +g+ 
  KHJ34295.1 665 SITCFVGTFYGNV 677
                 4666643333332 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.8   0.0    0.0025         9     230     260 ..      92     124 ..      66     152 .. 0.77
   2 ?    2.8   0.0      0.01        36     231     274 ..     247     288 ..     234     301 .. 0.82
   3 !    5.6   0.0    0.0014       5.1     150     246 ..     374     481 ..     336     505 .. 0.61

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.0025
                 TTEEEEEETT-EEEEEETTTTEEEEEEE--... CS
      Nup160 230 qtylfalsrdgkLrvWnlltgkclatidll..r 260
                  + l +ls+ ++L vW+l+t++ l++i+ +  +
  KHJ34295.1  92 ANRLISLSSKNELSVWDLATKRKLSSITPPgiT 124
                 577999*******************99866554 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.01
                 TEEEEEETT-EEEEEETTTTEEEEEEE--.-SSSTTS--SSEES CS
      Nup160 231 tylfalsrdgkLrvWnlltgkclatidllrdeeaqdessskstl 274
                 +++ +++ + +L  W+ ++g++l++++ll  e  +d+s+s +t 
  KHJ34295.1 247 KFVGTVYDNCVLNFWDSKDGRILRSKSLL--EKHDDKSKSSLTF 288
                 68889************************..5555555555555 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.0014
                 EEEEEE-SSSEEEEEETTS-EEEEEE.....ETTEEEEEEEEE-------B-..-TTTT...TSS--SS---TT-E...CEEEEET.....TTTEEEEE CS
      Nup160 150 pgrlaavssnellvsladggllklkr.....dedggawkesvfepksfllsl..sgllg..lladpsrrksgasva...lsldvavavveigqtylfal 236
                 p+ + a ++++l++ l++g l+ l+       + ++   +s +  + f +s+  ++ ++  +l+ + +r +g+ +    ++++   +++  ++++++a+
  KHJ34295.1 374 PHYAGAQDPLALIALLSSGELVTLSYpdgylISPTSLLHPSLLMVHPFVTSVevCNISRirWLSMVEKRLQGPFFItggIESQKPLKCSG-DRNIVLAA 471
                 555566666666666666666666663333322233333333333333333211222222255555555555543211122233333444.9******* PP

                 ETT-EEEEEE CS
      Nup160 237 srdgkLrvWn 246
                 + dg++r+W+
  KHJ34295.1 472 HGDGTIRIWD 481
                 *********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (979 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       355  (0.0198003); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.30s 00:00:00.99 Elapsed: 00:00:00.46
# Mc/sec: 6431.21
//
Query:       KHJ34296.1  [L=360]
Description: hypothetical protein EV44_g0396 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        0.1   12.4   2.1       0.12   12.1   0.5    1.8  2  DUF3490   Domain of unknown function (DUF3490)


Domain annotation for each model (and alignments):
>> DUF3490  Domain of unknown function (DUF3490)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1     0.091   1.6e+03      95     121 ..      93     121 ..      80     130 .. 0.58
   2 ?   12.1   0.5   6.9e-06      0.12      54     110 ..     131     187 ..     125     194 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.091
     DUF3490  95 ereel.y.akwgieleskqRrlqlakrlW 121
                 +ree+ y +  +i+ e k+Rrl    ++ 
  KHJ34296.1  93 QREEIlYwNAVKIAREEKERRLTEEYQIH 121
                 33332131345666677777766555555 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 6.9e-06
     DUF3490  54 fsegekavedektlslasslkalrreremlakqlqkklskeereelyakwgielesk 110
                  s+ ek++ +++++s  +s  +l+re e+ +++  +kls +e +++  k++i+ +s+
  KHJ34296.1 131 GSRDEKSIVNDQRTSAYNSSTNLTRENECHMRNRGRKLSISEANSFNDKHHIRTDSN 187
                 56677888999999999999********************************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       708  (0.0394891); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2718.24
//
Query:       KHJ34297.1  [L=519]
Description: putative endosome-associated ubiquitin isopeptidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-15   56.9   0.0    3.7e-15   56.0   0.0    1.5  1  JAB         JAB1/Mov34/MPN/PAD-1 ubiquitin protease
    9.3e-09   35.5   0.2    2.3e-07   31.0   0.0    2.3  2  USP8_dimer  USP8 dimerisation domain
      6e-06   26.0   0.0    1.3e-05   25.0   0.0    1.5  1  Prok-JAB    Prokaryotic homologs of the JAB domain
  ------ inclusion threshold ------
      0.094   12.4   0.4       0.15   11.8   0.4    1.3  1  DUF4638     Domain of unknown function (DUF4638)


Domain annotation for each model (and alignments):
>> JAB  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.0   0.0   8.1e-19   3.7e-15      14     117 ..     352     447 ..     340     448 .. 0.90

  Alignments for each domain:
  == domain 1  score: 56.0 bits;  conditional E-value: 8.1e-19
                 HHHHHHHHHHHHHTS--EEEEEEEESSSEEEEEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHCTTSEEEEEEEESSSS-SS--HHHHHHHHHH CS
         JAB  14 lkildhalrtekeeeevmGlliGelnddttveitnvfalpfeetekdvdavsldqeylekksellkklrgrervvGWYhshpditvwlsevdvrtqaly 112
                  ++l++a++++ ++ e++G+l+G+l ++  + i+ v++ ++e t +++++ ++         ++++k+  ++ v+GW+h+hp++t+++s+ d++t++ y
  KHJ34297.1 352 TEFLKYAESNTRKNLETCGMLCGTLISN-ALFIRRVVIPEQESTCDTCETTNEGAL-----FDYCDKQ--DLLVLGWIHTHPTQTCFMSSRDLHTHCGY 442
                 67999********9**************.999***************999998887.....8888885..8**************************** PP

                 HHHST CS
         JAB 113 qrmde 117
                 q m +
  KHJ34297.1 443 QIMMP 447
                 *9987 PP

>> USP8_dimer  USP8 dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0     5e-11   2.3e-07      30     113 ..      31     114 ..       9     115 .. 0.86
   2 ?    1.7   0.1     0.061   2.7e+02      67      96 ..     185     214 ..     178     225 .. 0.80

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 5e-11
  USP8_dimer  30 sikrllrsaeklfkkAeeyrlegdeEkAYvlymkylnll.elIrkksdykekkasvkellgdkkankvildklekLkesLkkrYe 113
                 ++k  +r+++ l+++A  y++eg++ +AY l+m+y  l  e  + ++ +k+ + + + +  +k+  +v ld+ e Lk + + rY+
  KHJ34297.1  31 PLKFWVRTSDTLLREALIYQQEGNDQQAYLLFMRYAALTaERFPLHPSFKDPEYKLSLNSIKKNLPSV-LDSMEVLKPRINSRYN 114
                 5666899*******************************************988888886667776666.8**************7 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.061
  USP8_dimer  67 llelIrkksdykekkasvkellgdkkankv 96 
                 l   + +k+d++e+ +++ ++lg +++  +
  KHJ34297.1 185 LQASLLQKNDFQENRSEFLSNLGPEEKDDI 214
                 55667899*************998876554 PP

>> Prok-JAB  Prokaryotic homologs of the JAB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   2.8e-09   1.3e-05      13      94 ..     361     441 ..     347     462 .. 0.72

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 2.8e-09
    Prok-JAB  13 rrahpeEtcGlllgke...seseevivvplvnewsn....rfeipdpedslarlkfearerglevvgiwHSHpggsarPSetDrrdaaa 94 
                   ++  EtcG+l g+        +++v+p+++   +    +++  + ++ ++     +++++l v+g +H+Hp+   + S+ D++++++
  KHJ34297.1 361 NTRKNLETCGMLCGTLisnALFIRRVVIPEQE---StcdtCETT-NEGALFD----YCDKQDLLVLGWIHTHPTQTCFMSSRDLHTHCG 441
                 456899*********97765556666666553...142433333.5555555....677*************************99887 PP

>> DUF4638  Domain of unknown function (DUF4638)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.4   3.3e-05      0.15     115     192 ..     148     224 ..      89     228 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.3e-05
     DUF4638 115 lipssyards..arksdldikDaialestqrsssfrrqslvldpllqetifgsrrstllrdwasktpdisyerkLksLme 192
                  i++++++    a +s+l +k  ia+e ++r ++ r+   ++ +llq + f + rs +l ++    +d  ye   +s +e
  KHJ34297.1 148 AITGNMSSMLaaADNSELAVK--IAQEEIDRRNKIRKVK-LQASLLQKNDFQENRSEFLSNLGPEEKDDIYEDVPQSCIE 224
                 344444443300344566665..9***********9998.999****************************987777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (519 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       701  (0.0390987); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4018.28
//
Query:       KHJ34298.1  [L=727]
Description: hypothetical protein EV44_g0844 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.045   13.8   0.1       0.16   12.1   0.1    1.8  2  Leucyl-specific  Leucine-tRNA synthetase-specific domain
        2.3    8.0   7.2         26    4.6   0.0    2.8  2  CHD5             CHD5-like protein


Domain annotation for each model (and alignments):
>> Leucyl-specific  Leucine-tRNA synthetase-specific domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.1     1e+04      10      35 ..     364     388 ..     363     390 .. 0.79
   2 ?   12.1   0.1   1.8e-05      0.16      16      43 ..     399     426 ..     395     434 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.1
  Leucyl-specific  10 eGeivrLseeaRirLeleeseLslee 35 
                      +G+iv  + +aR +  le + +s e 
       KHJ34298.1 364 DGKIVPKNINARKKSSLEAT-ISCEH 388
                      68888888889999999998.88776 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 1.8e-05
  Leucyl-specific  16 LseeaRirLeleeseLsleevkKmGAEL 43 
                      L +++  rL++e ++L le++kK G E+
       KHJ34298.1 399 LHKKREKRLDIERANLVLENMKKRGVEI 426
                      6678889******************997 PP

>> CHD5  CHD5-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   4.5     0.012     1e+02      22     100 ..      33     113 ..      20     119 .. 0.82
   2 ?    4.6   0.0    0.0029        26      75     113 ..     535     573 ..     532     598 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.012
        CHD5  22 knllwllylkkvssksakeqrklkkellklkeelnsis.aqDefAkWaKlnRkldkle.eeleklkkelsaskssfkkklk 100
                 +++  l+y+++ + ++++++r+l  e+ k++e+ + +s  +++f   + ++R+    + ++  ++k+els+ +++f+ kl 
  KHJ34298.1  33 RSFGILFYSSIRKYSNLQTTRDLEVEYPKVEEQTELTSfVKENFENLTNNDRNKRSSKsKKRTQKKQELSSPEENFDEKLR 113
                 56667899999999************************5589**********77666515566778888999999998876 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0029
        CHD5  75 dkleeeleklkkelsaskssfkkklkkvllvlttvpqlv 113
                   + +e+e+lk +++++ ssfk+ +k++  + ++++q++
  KHJ34298.1 535 ATVPTEIENLKIQIQNNTSSFKAGMKSLTPIEYSAVQYL 573
                 566789**********************99999888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (727 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1660  (0.0925874); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.26s 00:00:00.94 Elapsed: 00:00:00.42
# Mc/sec: 5159.40
//
Query:       KHJ34299.1  [L=375]
Description: putative mitochondrial aaa protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-40  139.3   2.8    1.7e-40  139.3   2.8    3.4  3  DUF4050   Protein of unknown function (DUF4050)


Domain annotation for each model (and alignments):
>> DUF4050  Protein of unknown function (DUF4050)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.6      0.25   4.6e+03      80      80 ..      55      55 ..      18     122 .. 0.51
   2 !  139.3   2.8   9.6e-45   1.7e-40      15     183 .]     145     286 ..     130     286 .. 0.79
   3 !    3.0   0.7    0.0062   1.1e+02      13      43 ..     334     364 ..     318     369 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.25
     DUF4050 80 s 80
                +
  KHJ34299.1 55 Y 55
                0 PP

  == domain 2  score: 139.3 bits;  conditional E-value: 9.6e-45
     DUF4050  15 vtsnqslderkrkrrraleeemkwNeGlalWearRdaWtgartvrkkekkerepseaesasseesssssealeeqsaessssssasatattspassees 113
                   ++++l+e k+kr+ +l++e + N+Gl++++arRd Wtgar vrk       +                     ++ ++s ++      +s ++  e+
  KHJ34299.1 145 NNQERKLREYKNKRKLELQKELAYNDGLRCFTARRDVWTGARVVRKLLSASPAK---------------------KTLDQSIKE------NSGDQTAEN 216
                 22344556999*********************************9994433222.....................111111111......122222334 PP

     DUF4050 114 eeeesvetlvPvappllppsnpirasItpasYpsiYsklvvqsktpsvpInLsdmikalVqgWkadgeWp 183
                 +  es+etlvPv + ++p++n +r+sItp sY+ iY+k+v++s tp++pInLsdmi+++VqgWk+dg+Wp
  KHJ34299.1 217 SLYESEETLVPVGRLIIPAENFVRSSITPHSYSFIYDKIVLNSITPTCPINLSDMIQSCVQGWKRDGQWP 286
                 556789***************************************************************9 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.0062
     DUF4050  13 savtsnqslderkrkrrraleeemkwNeGla 43 
                  + ++nqs+++r r+r+++ ++ +  N Gl+
  KHJ34299.1 334 LIDEQNQSKKQRGRAREKKGKDAKDRNRGLN 364
                 4556799999*******************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (375 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1199  (0.0668749); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2721.13
//
Query:       KHJ34300.1  [L=463]
Description: putative chromosome segregation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-34  117.6   0.1    7.4e-34  116.2   0.1    1.8  1  Csm1             Chromosome segregation protein Csm1/Pcs1
     0.0049   17.4   6.1     0.0066   17.0   0.7    3.1  2  DUF5344          Family of unknown function (DUF5344)
  ------ inclusion threshold ------
      0.086   13.2   5.1       0.38   11.2   0.2    3.9  3  FlaC_arch        Flagella accessory protein C (FlaC)
       0.11   12.5   0.0       0.27   11.2   0.0    1.6  1  Castor_Poll_mid  Castor and Pollux, part of voltage-gated ion
        0.3   11.2   5.3       0.14   12.2   1.0    2.7  2  RRM_3            RNA binding motif
       0.56   10.0   5.9        3.4    7.4   3.3    2.6  2  Lectin_N         Hepatic lectin, N-terminal domain


Domain annotation for each model (and alignments):
>> Csm1  Chromosome segregation protein Csm1/Pcs1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.2   0.1   2.5e-37   7.4e-34       1      83 [.     357     444 ..     357     445 .. 0.98

  Alignments for each domain:
  == domain 1  score: 116.2 bits;  conditional E-value: 2.5e-37
        Csm1   1 qlkedlyedLtGlivrsvkedesedvfdciqtgrngtlhfkLaisk.....efeeaeisYvPlldesrdkellelLPdYLveeitFpr 83 
                 qlked+y+dLtGl +rsv++  ++d+fdciqtgrngtlhfkLa+ +     ++++ ++sY+Plld++rdk l+elLPdYLv+eitFpr
  KHJ34300.1 357 QLKEDMYSDLTGLLMRSVTRGTDKDYFDCIQTGRNGTLHFKLAVGNeasadSYDDIQCSYTPLLDSNRDKMLMELLPDYLVDEITFPR 444
                 79********************************************999999999********************************8 PP

>> DUF5344  Family of unknown function (DUF5344)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.7   2.2e-06    0.0066      33      84 ..     195     246 ..     179     248 .. 0.90
   2 ?    1.6   0.3      0.14   4.2e+02      13      41 ..     283     311 ..     270     320 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 2.2e-06
     DUF5344  33 isgknsldvvekineleeeleellkaYktlllknvedtesaVdslkeaDeal 84 
                  + +++ ++ +ki e+++ +++l  +Y ++++  ++++e++ d lk++ e++
  KHJ34300.1 195 LENEGHTSMKRKIGEIKKRYQSLQLKYDEVVTLGIKEAEKNFDRLKKQNEEI 246
                 5667889999*************************************99886 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.14
     DUF5344  13 qkLselktaaeelktsipetisgknsldv 41 
                 +++++l+ +++ l+ts++   +++++l++
  KHJ34300.1 283 TEIKSLEAKLQYLETSLADSKAENKTLST 311
                 67888888888899998888888888876 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.46   1.4e+03      11      40 ..     194     224 ..     190     229 .. 0.59
   2 ?    0.9   0.3      0.21   6.4e+02      16      33 ..     229     246 ..     206     252 .. 0.67
   3 ?   11.2   0.2   0.00013      0.38       2      30 ..     285     313 ..     284     315 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.46
   FlaC_arch  11 klst.eletvkkeneelsksveelkenVkdl 40 
                 +l+    +++k+++ e++k  + l+ +  ++
  KHJ34300.1 194 ELENeGHTSMKRKIGEIKKRYQSLQLKYDEV 224
                 4444334567777777777777666555544 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.21
   FlaC_arch  16 letvkkeneelsksveel 33 
                 ++ ++k+++ l+k+ ee+
  KHJ34300.1 229 IKEAEKNFDRLKKQNEEI 246
                 555566666666666655 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 0.00013
   FlaC_arch   2 idelEnklsklsteletvkkeneelsksv 30 
                 i++lE kl+ l+t+l+  k+en+ ls+++
  KHJ34300.1 285 IKSLEAKLQYLETSLADSKAENKTLSTKL 313
                 799**********************9876 PP

>> Castor_Poll_mid  Castor and Pollux, part of voltage-gated ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0     9e-05      0.27      42      85 ..     211     254 ..     199     271 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 9e-05
  Castor_Poll_mid  42 gkkyedvllafqeavviGikvassgkiylnPeddevlqegdkll 85 
                       k+y++++l+++e+v +Gik+a++    l+ +++e+++ ++k l
       KHJ34300.1 211 KKRYQSLQLKYDEVVTLGIKEAEKNFDRLKKQNEEIISISNKCL 254
                      589********************999999999999999888876 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.0   4.8e-05      0.14      59      99 ..     141     182 ..     117     187 .. 0.76
   2 ?   -1.8   0.2       1.1   3.2e+03      48      75 ..     269     296 ..     265     319 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4.8e-05
                 HC.-B-CCTSSEEEEE--HHHHHHHHHHHHHHHHHCC---S- CS
       RRM_3  59 ea.klkikdaevtlelLeGeeEkeywkkiledkqkkknnare 99 
                  + k++++ +  +++ LeGe E  +w +i+++ + k+nn ++
  KHJ34300.1 141 LSdKVILESQVTEIKELEGEDEDVEWDEIVQNEKPKANNYQR 182
                 3368999999999*****************999888866433 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHC-B-CCTSSEEEEE-- CS
       RRM_3  48 eeakkalekateaklkikdaevtlelLe 75 
                 +eak +  k+ +a  +ik  e +l+ Le
  KHJ34300.1 269 NEAKSLERKLSAAGTEIKSLEAKLQYLE 296
                 5688888888888888888888888776 PP

>> Lectin_N  Hepatic lectin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   3.3    0.0011       3.4      57     107 ..     254     303 ..     246     318 .. 0.75
   2 ?    2.5   0.1     0.037   1.1e+02      70     107 ..     325     362 ..     303     374 .. 0.71

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0011
    Lectin_N  57 LetLketfsnfssstlaeiqalssqggslsekvtsleaklekkqqdlkadh 107
                 L++Lk++++n ++    e ++l+ + + ++ +++sleakl+  + +l   +
  KHJ34300.1 254 LSSLKTDLKNQTT-LANEAKSLERKLSAAGTEIKSLEAKLQYLETSLADSK 303
                 6778888888875.4567888888888888888888888887777765544 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.037
    Lectin_N  70 stlaeiqalssqggslsekvtsleaklekkqqdlkadh 107
                 s++++i + + +++   +++ s+ea l  + ++lk+d 
  KHJ34300.1 325 SVNSKIPSSTIKANGGIRMMGSVEAALTAQAAQLKEDM 362
                 444555555667777778999*************9995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (463 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1840  (0.102627); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 3108.21
//
Query:       KHJ34301.1  [L=523]
Description: putative pheromone-regulated membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-92  310.2   9.0    1.5e-92  310.0   9.0    1.1  1  KCH       Fungal potassium channel


Domain annotation for each model (and alignments):
>> KCH  Fungal potassium channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  310.0   9.0   8.2e-97   1.5e-92       1     251 []      17     270 ..      17     270 .. 0.99

  Alignments for each domain:
  == domain 1  score: 310.0 bits;  conditional E-value: 8.2e-97
         KCH   1 kfdfidledFksksfltvlkYillwvllllslavyvsDiytavkLLafnkwsneikpaipfkiskwiFsgcIilsfvllayeaikairiirsrniaeay 99 
                 k++fi+l+dF+s+s++  ++Y++lw +l++s +vy +D++tav+LLa+++ws+e +p+ipf+iskwiFs+cIi+s+v+la+e ++air ir++ + e+y
  KHJ34301.1  17 KWEFISLNDFHSTSYFNHVAYAYLWASLVISGTVYGVDTFTAVNLLAYDRWSSEFDPFIPFNISKWIFSVCIIASLVNLAFEQVRAIRLIRRGAVVESY 115
                 8************************************************************************************************** PP

         KCH 100 lnnlarrlyslr...sYkrFcvfeeitkskkkadkvalfvyfelkswlrllladgPRqviNaltLysvlkaklkekgekkleslsglfekikalaeenl 195
                 l++la+rl+s r   ++krF+vf+e+tkskk+a++valf+yf++++w+r+++++gPRqviN+ltLysvlk + ++++ +   s+ +++++++ la++n+
  KHJ34301.1 116 LDSLAARLQSTRlrsGWKRFLVFAELTKSKKGAEYVALFTYFSFQTWIRIVFCQGPRQVINGLTLYSVLKLQYDSDQPNIAMSILTFINNLSILADKNK 214
                 ************************************************************************998777779****************** PP

         KCH 196 eeavilsfmlftvviwvlsilklivavilyipllvkiikkedgsLkeYccrkvdkr 251
                 ++ +ils+m+ft+viw + +l+l++a+++y+++l+++i+k+dg+L+ Yc+rk+++r
  KHJ34301.1 215 HQVLILSAMAFTLVIWGVGALRLLFAFVIYLLFLWHYIPKADGGLSGYCERKINTR 270
                 *****************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       771  (0.043003); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3611.94
//
Query:       KHJ34302.1  [L=194]
Description: putative cox20 fam36a protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-36  123.1   0.2    4.9e-36  122.6   0.2    1.2  1  DUF3767   Protein of unknown function (DUF3767)
  ------ inclusion threshold ------
      0.023   14.4   0.1       0.03   14.1   0.1    1.2  1  AAA_15    AAA ATPase domain


Domain annotation for each model (and alignments):
>> DUF3767  Protein of unknown function (DUF3767)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.6   0.2   5.5e-40   4.9e-36       2     100 ..      63     161 ..      62     162 .. 0.97

  Alignments for each domain:
  == domain 1  score: 122.6 bits;  conditional E-value: 5.5e-40
     DUF3767   2 aslsdavktisledfsklvsiPCaRdslltGigagavvGglrfvlkknvakaaNWavgafllgsivayeqCrarrrkekekmkravevvkekkakkeke 100
                 +sl  a+kt++ledf++++++PCa+dsl++Gi++ +++Gg+r+v++++++kaaNWavg+f++++i++ye+C+a+r+ ek++mk+ vev+++kka+++++
  KHJ34302.1  63 PSLYGALKTVRLEDFKQVHMYPCAKDSLIVGIASAFGMGGIRAVFGASIPKAANWAVGTFVITAIASYEVCQAKRSFEKNQMKKIVEVMDQKKAEMTAK 161
                 57889******************************************************************************************9986 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.1   3.3e-06      0.03     184     243 ..      39     170 ..       3     187 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 3.3e-06
      AAA_15 184 e..............................................................................elknvlksaiiklllisakR 204
                                                                                                 ++ +   ai  +++++akR
  KHJ34302.1  39 PpnanvlpegsgqntagalgreevpslygalktvrledfkqvhmypcakdslivgiasafgmggiravfgasipkaanwAVGTFVITAIASYEVCQAKR 137
                 24555777777777777777777777777777777777777777777777777777777788888888888888888888999999************* PP

      AAA_15 205 nvsdedsekkssllgklkekileealqekleeelteklk 243
                 ++++++ +k+ ++++++k +   + +       l+ek  
  KHJ34302.1 138 SFEKNQMKKIVEVMDQKKAEMTAKEA------ALNEKRL 170
                 ******************99977532......2222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1430  (0.079759); expected 358.6 (0.02)
Passed bias filter:                      701  (0.0390987); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1411.60
//
Query:       KHJ34303.1  [L=488]
Description: putative duf895 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-07   31.4   5.7    1.4e-07   31.4   5.7    2.2  2  UNC-93    Ion channel regulatory protein UNC-93
    1.3e-06   27.6  30.9    2.4e-06   26.7  30.9    1.4  1  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> UNC-93  Ion channel regulatory protein UNC-93
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   5.7   1.5e-11   1.4e-07      45     148 ..      84     193 ..      72     202 .. 0.89
   2 ?   -1.9   0.8      0.26   2.3e+03      63      73 ..     439     449 ..     379     462 .. 0.53

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 1.5e-11
      UNC-93  45 iiyavftvanlvapsvvdlltakwalvigallyaifqlgFlllnky......ylyissallGvgaallwtgqGsyLsenstretiernssilwallkss 137
                  +y++f++ +++  ++ + ++ k+ l +g++ ya+  +++l + ++      ++ ++  + G++aa+lwt+ G   +   t++t ++  +i+w+++++ 
  KHJ34303.1  84 AVYTTFSALAFIGGTIYNRIGIKLCLAFGGIGYACLASAYLTTSHIgdrampWIVTAGCIEGLSAAMLWTAVGAVTTCYPTEQTKGKAFAIFWTIFEMG 182
                 58***************************************998654444447999******************************************* PP

      UNC-93 138 lliGgiflilv 148
                  ++G+i+ i++
  KHJ34303.1 183 GVLGSIIPICM 193
                 ****9997777 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.26
      UNC-93  63 lltakwalvig 73 
                 +  + w ++ig
  KHJ34303.1 439 IFISTWCIMIG 449
                 33333333333 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7  30.9   2.7e-10   2.4e-06      35     351 ..      79     425 ..      43     426 .. 0.69

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 2.7e-10
       MFS_1  35 gllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllfa.....sslwlllvlrvlqGlgagalfpagaaliadwfpkeergraiglls 127
                   + ++++ +++++++++G + +r+G + +l +g +++a   +++l+ +       +++++ + ++ Gl a++l++a++a+++ + +++ +g+a++++ 
  KHJ34303.1  79 TNANVAVYTTFSALAFIGGTIYNRIGIKLCLAFGGIGYACLaSAYLT-TshigdRAMPWIVTAGCIEGLSAAMLWTAVGAVTTCYPTEQTKGKAFAIFW 176
                 3355667888999****************999999999998566666.22334433778**************************************** PP

       MFS_1 128 agfslGailgpllgglla.sslgWrav........fyilaivsllafvlfllllpeepperkrkspkeeekgtgpaplvpawkallkdpvlwilliall 217
                 + f +G +lg ++   +  +s     +        ++++ +++l ++ + lll+p +++ r   s++         p  p wk+  +    ++l  +++
  KHJ34303.1 177 TIFEMGGVLGSIIPICMDwDS-----TsanledgsYIAFIVIMLCGCFIPLLLIPSDQVIRIDGSSVVI-------PKMPTWKSEITGMCRLLLQNSWV 263
                 **********99977666444.....3334445559999999999966655666555555555544333.......33333444333332222444555 PP

       MFS_1 218 lfffgfsglltllplylqevlgls..........glllaglllallalvgail.allagrlsdr.lgrrrrlllallllllaalglallavt....... 297
                 l+ f +++++ ++ +y   +++ +          gl+++ + +  ++ +g +l +++  +ls+    r  ++ +++ ++++++ g+ l+ ++       
  KHJ34303.1 264 LTLFPYFAASNWFYTYQANDFNVPnftlrtryvnGLWSNFFCMVGVWTMGTFLdFPFNIKLSRPtRARVGIIAVFITSIIVWSGGWHLAKNSkrgespi 362
                 555566666666666666666666666666555688888888888888888887777777774446668888899999999999999999999964433 PP

       MFS_1 298 .ssavllll.............vlvliGfglgfvfpsllalasdla.ppeeagtasglfntagslggal 351
                         +             +++ +Gf  g+v++ ++ ++ +l        +++g++ +++s+++a+
  KHJ34303.1 363 pL------IditetrryipfgaIYIAYGFYDGCVQSYANWIIGSLSnNSAVLSHYAGWYRSIQSAAAAV 425
                 30......3456666666666455559999999866666555555522246669999999999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (488 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       549  (0.0306208); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.45
# Mc/sec: 3292.73
//
Query:       KHJ34304.1  [L=580]
Description: hypothetical protein EV44_g5022 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.14   12.1   0.4       0.22   11.4   0.4    1.3  1  Apolipoprotein  Apolipoprotein A1/A4/E domain


Domain annotation for each model (and alignments):
>> Apolipoprotein  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.4   1.2e-05      0.22      34      81 ..       3      50 ..       1      62 [. 0.85

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.2e-05
                    HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCHHHHH CS
  Apolipoprotein 34 eleelrarlraeleevrarlepyrdevqeqlgqnleelrqrlapytee 81
                    e+  l  +l+++l+++  ++ +yr e+  ++++ + +l q +ap + +
      KHJ34304.1  3 EASHLVSELQRKLDDLDHKVWAYRREMASEFEKYTNDLLQNVAPDVAK 50
                    778899999999999999999999999999999999999999998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (580 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       744  (0.041497); expected 358.6 (0.02)
Passed bias filter:                      457  (0.0254894); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4231.79
//
Query:       KHJ34305.1  [L=176]
Description: hypothetical protein EV44_g4179 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.062   12.9   0.1       0.11   12.1   0.1    1.3  1  Ion_trans_N  Ion transport protein N-terminal


Domain annotation for each model (and alignments):
>> Ion_trans_N  Ion transport protein N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   6.3e-06      0.11       7      29 ..     140     161 ..     139     164 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 6.3e-06
  Ion_trans_N   7 PsdNklalklFGskkAlekEkeR 29 
                  P++Nk++   FGs++ le Ek R
   KHJ34305.1 140 PEVNKMSFEQFGSNNRLE-EKTR 161
                  9**************997.6666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.21s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 1442.62
//
Query:       KHJ34306.1  [L=214]
Description: hypothetical protein EV44_g4348 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.9e-18   64.5   0.0    1.6e-17   63.7   0.0    1.4  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.7   0.0   9.1e-22   1.6e-17       2     172 ..     100     214 .]      99     214 .] 0.96

  Alignments for each domain:
  == domain 1  score: 63.7 bits;  conditional E-value: 9.1e-22
                 E-TT.S-EEE.......-THHHHCTB--.........-------HHHH.............HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET. CS
       RVT_1   2 pKkgpgsyRp.isllsvdykalnkliakrLkdvlekllsenqpgfrpgrstldavedllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvpt 99 
                 +K++ g+ R  +     dy+aln +++k         + + +p +++              l++  k ++++k+D++ aF++ +++++++++taf+++ 
  KHJ34306.1 100 KKPD-GGLRFcV-----DYRALNTITKK---------DRNLLPLIKET-------------LRSISKVTWITKVDVRAAFHKLRVRKEDEEKTAFRTR- 169
                 7999.*****55.....***********.........*******9999.............7888*********************************. PP

                 ........................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEE CS
       RVT_1 100 klinliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDili 172
                                          g++e+ ++p+G+  +P+ f++++ne l  +      v++++Y DDili
  KHJ34306.1 170 ------------------------FGSFEWLVTPFGLQGAPAAFQRYVNESLGNYLD----VFCTAYLDDILI 214
                 ........................9*******************************8....9*********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       312  (0.017402); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.20s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1853.76
//
Query:       KHJ34307.1  [L=706]
Description: hypothetical protein EV44_g5965 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (706 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       620  (0.0345808); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.19s 00:00:00.77 Elapsed: 00:00:00.37
# Mc/sec: 5678.67
//
Query:       KHJ34308.1  [L=578]
Description: putative heat shock protein sti1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-46  154.3  20.0    7.6e-07   28.7   0.0    9.6  9  TPR_1        Tetratricopeptide repeat
    1.2e-38  128.1  15.5    2.6e-05   24.0   0.1    9.7  9  TPR_2        Tetratricopeptide repeat
    2.1e-34  117.2  13.5      1e-17   63.8   2.9    3.0  2  STI1         STI1 domain
    6.3e-22   77.0  18.4    4.3e-05   23.1   0.0    7.9  8  TPR_11       TPR repeat
    3.5e-21   73.6  27.5    0.00044   20.2   0.7    9.8 10  TPR_8        Tetratricopeptide repeat
    1.3e-17   63.0   0.3        0.5   11.3   0.1    7.7  7  TPR_14       Tetratricopeptide repeat
    2.9e-16   59.5  10.2    1.8e-08   34.6   0.0    7.2  7  TPR_12       Tetratricopeptide repeat
      7e-16   58.5   6.7     0.0017   18.8   0.0    6.4  5  TPR_19       Tetratricopeptide repeat
    1.1e-15   56.4   3.5     0.0096   15.9   0.0    8.2  9  TPR_7        Tetratricopeptide repeat
    6.1e-13   48.7   0.0    3.5e-05   23.8   0.0    4.9  5  TPR_9        Tetratricopeptide repeat
    4.7e-12   45.4   4.7        0.1   13.0   0.2    7.2  6  TPR_17       Tetratricopeptide repeat
    7.4e-12   45.7   1.8     0.0024   18.5   0.0    5.7  5  TPR_16       Tetratricopeptide repeat
    3.7e-08   33.0   1.5       0.02   14.8   0.0    6.9  7  TPR_10       Tetratricopeptide repeat
    8.1e-08   32.4  10.7        3.1    8.6   0.0    8.5  9  TPR_6        Tetratricopeptide repeat
     0.0028   17.7   3.6        9.4    6.4   0.0    5.8  6  Fis1_TPR_C   Fis1 C-terminal tetratricopeptide repeat
     0.0052   16.8   7.6         18    5.4   7.6    2.7  1  ANAPC8       Anaphase promoting complex subunit 8 / Cdc23
     0.0083   15.6   1.1        3.8    7.0   0.0    3.8  5  SHNi-TPR     SHNi-TPR
  ------ inclusion threshold ------
      0.021   15.1  12.6       0.24   11.6   0.6    4.3  4  ANAPC3       Anaphase-promoting complex, cyclosome, subunit 3
      0.033   13.9   0.5      0.033   13.9   0.5    3.5  5  RPN7         26S proteasome subunit RPN7
        2.6    7.8   5.7        7.5    6.4   2.2    3.1  2  XPC-binding  XPC-binding domain
        2.9    8.0  19.2         17    5.6   1.9    7.1  8  MIT          MIT (microtubule interacting and transport) doma


Domain annotation for each model (and alignments):
>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.2   5.3e-08   4.5e-05       5      34 .]       6      35 ..       3      35 .. 0.89
   2 !    7.3   0.0    0.0051       4.4       9      33 ..      44      68 ..      38      68 .. 0.90
   3 !   14.7   0.0   2.3e-05      0.02       1      34 []      70     103 ..      70     103 .. 0.97
   4 !   14.4   0.2     3e-05     0.026       6      27 ..     260     281 ..     255     287 .. 0.87
   5 !   25.8   0.0   7.1e-09   6.1e-06       3      28 ..     290     315 ..     288     317 .. 0.94
   6 !   19.2   0.2   8.7e-07   0.00074       1      29 [.     329     357 ..     329     359 .. 0.95
   7 !   12.7   0.0   9.8e-05     0.084       7      34 .]     395     422 ..     393     422 .. 0.96
   8 !   28.7   0.0   8.9e-10   7.6e-07       2      34 .]     424     456 ..     423     456 .. 0.95
   9 !   14.2   0.2   3.5e-05      0.03       2      27 ..     458     483 ..     457     487 .. 0.92

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 5.3e-08
                HHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1  5 ynlGnayfklgkydeAleyyekALelnPnn 34
                + lGn     +++deA++y+ +A+ ++Pnn
  KHJ34308.1  6 KALGNKSIAEKNFDEAIKYFTEAIAIEPNN 35
                6688888899*******************8 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0051
                HHHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1  9 nayfklgkydeAleyyekALelnPn 33
                +ay ++++y+ Al + e + ++ P+
  KHJ34308.1 44 AAYASKKDYQNALSDAENVTTIKPD 68
                69*************9999999996 PP

  == domain 3  score: 14.7 bits;  conditional E-value: 2.3e-05
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALelnPnn 34 
                 ak + + G+a + lg++d A  +yek L ++ nn
  KHJ34308.1  70 AKGWGRVGAAKHGLGDLDGARIAYEKGLAIDSNN 103
                 799****************************998 PP

  == domain 4  score: 14.4 bits;  conditional E-value: 3e-05
                 HHHHHHHHTT-HHHHHHHHHHH CS
       TPR_1   6 nlGnayfklgkydeAleyyekA 27 
                  lG   +k+ ++d+A+ +y+kA
  KHJ34308.1 260 ELGTQNYKMRNFDQAISHYNKA 281
                 588889***************9 PP

  == domain 5  score: 25.8 bits;  conditional E-value: 7.1e-09
                 HHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_1   3 alynlGnayfklgkydeAleyyekAL 28 
                  l+nlG++yf++g++d+++e +++A+
  KHJ34308.1 290 YLNNLGAVYFEKGDFDKCIEVCQQAI 315
                 58***********************9 PP

  == domain 6  score: 19.2 bits;  conditional E-value: 8.7e-07
                 HHHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   1 akalynlGnayfklgkydeAleyyekALe 29 
                 ak++ ++G+ay k+ +++ A+  y+k L+
  KHJ34308.1 329 AKSYARIGLAYEKKDDLESAISNYKKSLT 357
                 799***********************995 PP

  == domain 7  score: 12.7 bits;  conditional E-value: 9.8e-05
                 HHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   7 lGnayfklgkydeAleyyekALelnPnn 34 
                 lGna fk  ++  A+e+y++ ++  P++
  KHJ34308.1 395 LGNAKFKESDWPAAVEAYSEMIKRAPDD 422
                 9*************************96 PP

  == domain 8  score: 28.7 bits;  conditional E-value: 8.9e-10
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALelnPnn 34 
                 + + n+++a++kl ++  A++++ekA++ +P++
  KHJ34308.1 424 RGYSNRAAAFMKLLEFPSAIDDCEKAIKKDPTF 456
                 78*****************************96 PP

  == domain 9  score: 14.2 bits;  conditional E-value: 3.5e-05
                 HHHHHHHHHHHHTT-HHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekA 27 
                 +a+ ++++ayf + +y ++l+ + +A
  KHJ34308.1 458 RAYLRKAQAYFGMREYSKCLDVCTEA 483
                 79*********************999 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.1   3.1e-08   2.6e-05       4      34 .]       5      35 ..       3      35 .. 0.93
   2 !    8.2   0.0    0.0035         3       4      33 ..      39      68 ..      36      69 .. 0.89
   3 !   14.3   0.0   3.8e-05     0.033       1      34 []      70     103 ..      70     103 .. 0.94
   4 !   10.9   0.1   0.00048      0.41       7      27 ..     261     281 ..     259     287 .. 0.87
   5 !   20.6   0.0   3.7e-07   0.00032       3      29 ..     290     316 ..     289     319 .. 0.94
   6 !   14.1   0.1   4.4e-05     0.038       1      28 [.     329     356 ..     329     359 .. 0.93
   7 !   10.3   0.1   0.00073      0.62       2      34 .]     390     422 ..     389     422 .. 0.92
   8 !   18.0   0.0   2.5e-06    0.0021       2      33 ..     424     455 ..     423     456 .. 0.95
   9 !    9.2   0.1    0.0017       1.4       2      29 ..     458     485 ..     457     489 .. 0.90

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 3.1e-08
       TPR_2  4 lynlGlayyklgdyeeAleafekAleldPnn 34
                l +lG+  ++ ++++eA+++f +A++++Pnn
  KHJ34308.1  5 LKALGNKSIAEKNFDEAIKYFTEAIAIEPNN 35
                66899999**********************8 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0035
       TPR_2  4 lynlGlayyklgdyeeAleafekAleldPn 33
                  n+  ay+ ++dy+ Al + e +  + P+
  KHJ34308.1 39 FSNRSAAYASKKDYQNALSDAENVTTIKPD 68
                6799****************9999888887 PP

  == domain 3  score: 14.3 bits;  conditional E-value: 3.8e-05
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldPnn 34 
                 a+++ + G a   lgd++ A+ a+ek l++d nn
  KHJ34308.1  70 AKGWGRVGAAKHGLGDLDGARIAYEKGLAIDSNN 103
                 67899999999********************997 PP

  == domain 4  score: 10.9 bits;  conditional E-value: 0.00048
       TPR_2   7 lGlayyklgdyeeAleafekA 27 
                 lG   yk+ ++++A+ +++kA
  KHJ34308.1 261 LGTQNYKMRNFDQAISHYNKA 281
                 78888***************9 PP

  == domain 5  score: 20.6 bits;  conditional E-value: 3.7e-07
       TPR_2   3 alynlGlayyklgdyeeAleafekAle 29 
                 +l+nlG +y+++gd+++++e +++A+ 
  KHJ34308.1 290 YLNNLGAVYFEKGDFDKCIEVCQQAID 316
                 699**********************96 PP

  == domain 6  score: 14.1 bits;  conditional E-value: 4.4e-05
       TPR_2   1 aealynlGlayyklgdyeeAleafekAl 28 
                 a+ + ++Glay+k++d+e A+  ++k+l
  KHJ34308.1 329 AKSYARIGLAYEKKDDLESAISNYKKSL 356
                 67899*********************98 PP

  == domain 7  score: 10.3 bits;  conditional E-value: 0.00073
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPnn 34 
                 e   +lG+a +k  d+  A+ea+ + ++ +P++
  KHJ34308.1 390 EEARELGNAKFKESDWPAAVEAYSEMIKRAPDD 422
                 56678**************************96 PP

  == domain 8  score: 18.0 bits;  conditional E-value: 2.5e-06
       TPR_2   2 ealynlGlayyklgdyeeAleafekAleldPn 33 
                 +++ n++ a +kl ++  A++++ekA++ dP+
  KHJ34308.1 424 RGYSNRAAAFMKLLEFPSAIDDCEKAIKKDPT 455
                 789****************************8 PP

  == domain 9  score: 9.2 bits;  conditional E-value: 0.0017
       TPR_2   2 ealynlGlayyklgdyeeAleafekAle 29 
                 +a+ + ++ay+ + +y ++l+ + +A e
  KHJ34308.1 458 RAYLRKAQAYFGMREYSKCLDVCTEASE 485
                 6899*******************99966 PP

>> STI1  STI1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.8   2.9   1.2e-20     1e-17       1      55 []     140     194 ..     140     194 .. 0.98
   2 !   57.8   3.1   9.1e-19   7.7e-16       2      54 ..     517     569 ..     516     570 .. 0.96

  Alignments for each domain:
  == domain 1  score: 63.8 bits;  conditional E-value: 1.2e-20
        STI1   1 dpelfaklaanPetrellsDPefvakleeiqsNPqalqqymsDprimtvlsvLmg 55 
                 dp++f+kla+nP+t+++l+DP+f+ kl  +++NP+a q+++sDpr+ +vl+ Lmg
  KHJ34308.1 140 DPQIFQKLASNPKTSKFLADPTFMMKLSNLKNNPNASQEMFSDPRMIQVLGALMG 194
                 79**********************************99999*************8 PP

  == domain 2  score: 57.8 bits;  conditional E-value: 9.1e-19
        STI1   2 pelfaklaanPetrellsDPefvakleeiqsNPqalqqymsDprimtvlsvLm 54 
                 ++  ++++ +P + e+++DP ++++l++ qs+P+alq++m++p i t++++L+
  KHJ34308.1 517 EQTKERIQRDPAIIEIMQDPVMQSILQQAQSDPAALQEHMRNPAIRTKIQKLV 569
                 67789**********************************************96 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.5   2.5e-05     0.021       2      40 ..      10      48 ..       9      57 .. 0.90
   2 !   14.2   0.1   3.1e-05     0.026       7      35 ..      83     111 ..      77     114 .. 0.87
   3 !   13.7   0.2   4.3e-05     0.037       9      42 .]     270     302 ..     264     302 .. 0.88
   4 !    6.6   0.0     0.007         6       1      22 [.     295     316 ..     295     316 .. 0.92
   5 ?    4.6   0.2     0.031        27       1      21 [.     336     356 ..     332     357 .. 0.90
   6 ?   -2.2   0.2       4.1   3.5e+03       6      17 ..     372     383 ..     370     389 .. 0.86
   7 !   23.1   0.0   5.1e-08   4.3e-05       1      41 [.     396     436 ..     396     436 .. 0.98
   8 !   13.1   0.0   6.6e-05     0.057      10      40 ..     439     469 ..     438     470 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.5e-05
      TPR_11  2 dayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayyk 40
                +   +  +++eAi+ + +A+++ P+n  +++n+ +ay+ 
  KHJ34308.1 10 NKSIAEKNFDEAIKYFTEAIAIEPNNHILFSNRSAAYAS 48
                55567789*************************999975 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 3.1e-05
      TPR_11   7 qGkyeeAieaYkkAlkldPdnaeayynLG 35 
                 +G++++A  aY+k l++d++na + ++L+
  KHJ34308.1  83 LGDLDGARIAYEKGLAIDSNNAQIKSGLA 111
                 8*********************9977776 PP

  == domain 3  score: 13.7 bits;  conditional E-value: 4.3e-05
      TPR_11   9 kyeeAieaYkkAlkldPdnaeayynLGlayykqG 42 
                 ++++Ai +Y+kA +l  d    ++nLG++y+++G
  KHJ34308.1 270 NFDQAISHYNKAWELHKD-IVYLNNLGAVYFEKG 302
                 689************765.66789********98 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.007
      TPR_11   1 GdayyeqGkyeeAieaYkkAlk 22 
                 G +y+e+G++++ ie+ ++A++
  KHJ34308.1 295 GAVYFEKGDFDKCIEVCQQAID 316
                 669****************995 PP

  == domain 5  score: 4.6 bits;  conditional E-value: 0.031
      TPR_11   1 GdayyeqGkyeeAieaYkkAl 21 
                 G ay ++ ++e Ai +Ykk l
  KHJ34308.1 336 GLAYEKKDDLESAISNYKKSL 356
                 77888999**********965 PP

  == domain 6  score: -2.2 bits;  conditional E-value: 4.1
      TPR_11   6 eqGkyeeAieaY 17 
                 e+ k+e+A +aY
  KHJ34308.1 372 EKKKIENARAAY 383
                 678999999999 PP

  == domain 7  score: 23.1 bits;  conditional E-value: 5.1e-08
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPdnaeayynLGlayykq 41 
                 G+a ++  ++++A+eaY++ +k  Pd+++ y+n+++a++k+
  KHJ34308.1 396 GNAKFKESDWPAAVEAYSEMIKRAPDDPRGYSNRAAAFMKL 436
                 9*************************************986 PP

  == domain 8  score: 13.1 bits;  conditional E-value: 6.6e-05
      TPR_11  10 yeeAieaYkkAlkldPdnaeayynLGlayyk 40 
                 ++ Ai + +kA+k dP++ +ay+  ++ay+ 
  KHJ34308.1 439 FPSAIDDCEKAIKKDPTFIRAYLRKAQAYFG 469
                 567888889********************95 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.1   3.5e-05      0.03      14      34 .]      15      35 ..       8      35 .. 0.92
   2 !    7.4   0.0    0.0068       5.8       8      33 ..      43      68 ..      39      68 .. 0.90
   3 !   12.4   0.0   0.00017      0.14       1      34 []      70     103 ..      70     103 .. 0.92
   4 ?    4.3   0.0     0.068        58      13      29 ..     267     283 ..     265     287 .. 0.86
   5 !   16.6   0.0   7.6e-06    0.0065       4      29 ..     291     316 ..     289     317 .. 0.94
   6 !   20.2   0.7   5.2e-07   0.00044       1      28 [.     329     356 ..     329     358 .. 0.95
   7 ?   -1.5   0.2       4.9   4.2e+03      13      24 ..     372     383 ..     371     384 .. 0.88
   8 ?   -1.4   0.1       4.5   3.9e+03      19      34 .]     407     422 ..     407     422 .. 0.89
   9 ?    1.3   0.0      0.62   5.3e+02       6      32 ..     428     454 ..     423     456 .. 0.70
  10 !    8.4   0.2    0.0032       2.7       2      31 ..     458     487 ..     457     487 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.5e-05
                TT-HHHHHHHHHHHHHHHHH. CS
       TPR_8 14 lgdyeeAkeyyekaleldpdn 34
                 ++++eA++y+ +a+ ++p+n
  KHJ34308.1 15 EKNFDEAIKYFTEAIAIEPNN 35
                699****************97 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0068
                HHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  8 gsiylklgdyeeAkeyyekaleldpd 33
                + +y +++dy++A +  e +++++pd
  KHJ34308.1 43 SAAYASKKDYQNALSDAENVTTIKPD 68
                568********************997 PP

  == domain 3  score: 12.4 bits;  conditional E-value: 0.00017
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 a+ + + g + + lgd++ A  +yek l +d +n
  KHJ34308.1  70 AKGWGRVGAAKHGLGDLDGARIAYEKGLAIDSNN 103
                 57799999999********************986 PP

  == domain 4  score: 4.3 bits;  conditional E-value: 0.068
                 HTT-HHHHHHHHHHHHH CS
       TPR_8  13 klgdyeeAkeyyekale 29 
                 k+ ++++A++ y+ka e
  KHJ34308.1 267 KMRNFDQAISHYNKAWE 283
                 7899**********955 PP

  == domain 5  score: 16.6 bits;  conditional E-value: 7.6e-06
                 HHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_8   4 yynlgsiylklgdyeeAkeyyekale 29 
                 ++nlg +y+++gd+++ +e++++a++
  KHJ34308.1 291 LNNLGAVYFEKGDFDKCIEVCQQAID 316
                 79**********************95 PP

  == domain 6  score: 20.2 bits;  conditional E-value: 5.2e-07
                 CCHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8   1 aeayynlgsiylklgdyeeAkeyyekal 28 
                 a++y ++g++y+k+ d+e+A++ y+k l
  KHJ34308.1 329 AKSYARIGLAYEKKDDLESAISNYKKSL 356
                 789***********************98 PP

  == domain 7  score: -1.5 bits;  conditional E-value: 4.9
                 HTT-HHHHHHHH CS
       TPR_8  13 klgdyeeAkeyy 24 
                 +++++e+A ++y
  KHJ34308.1 372 EKKKIENARAAY 383
                 5899*****998 PP

  == domain 8  score: -1.4 bits;  conditional E-value: 4.5
                 HHHHHHHHHHHHHHH. CS
       TPR_8  19 eAkeyyekaleldpdn 34 
                 +A+e+y + ++ +pd+
  KHJ34308.1 407 AAVEAYSEMIKRAPDD 422
                 699********99986 PP

  == domain 9  score: 1.3 bits;  conditional E-value: 0.62
                 HHHHHHHHTT-HHHHHHHHHHHHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAkeyyekaleldp 32 
                 n + + +kl ++ +A+  +eka++ dp
  KHJ34308.1 428 NRAAAFMKLLEFPSAIDDCEKAIKKDP 454
                 55556666666668999*****99666 PP

  == domain 10  score: 8.4 bits;  conditional E-value: 0.0032
                 CHHHHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyyekaleld 31 
                 +ay++++++y+ + +y +   ++ +a e+d
  KHJ34308.1 458 RAYLRKAQAYFGMREYSKCLDVCTEASEAD 487
                 8*****************999999998875 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.6   0.0   0.00097      0.83      12      34 ..      13      35 ..       3      39 .. 0.84
   2 ?    7.3   0.0     0.011       9.8       8      42 ..      77     111 ..      70     113 .. 0.81
   3 ?    2.4   0.0      0.43   3.7e+02       9      33 ..     263     287 ..     258     292 .. 0.80
   4 !    9.4   0.0    0.0025       2.1       7      30 ..     294     317 ..     290     327 .. 0.91
   5 ?    0.5   0.0       1.7   1.5e+03       4      30 ..     332     358 ..     329     371 .. 0.81
   6 !   11.3   0.1   0.00058       0.5       4      38 ..     392     426 ..     389     434 .. 0.86
   7 !   10.8   0.0   0.00085      0.73       7      43 ..     429     465 ..     426     466 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00097
      TPR_14 12 lalGdpdeAiallrralalaPdd 34
                 a  ++deAi+++ +a+a  P++
  KHJ34308.1 13 IAEKNFDEAIKYFTEAIAIEPNN 35
                56789****************98 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.011
      TPR_14   8 aeallalGdpdeAiallrralalaPddaeawllla 42 
                 ++a   lGd+d+A+ ++++ la + ++a++   la
  KHJ34308.1  77 GAAKHGLGDLDGARIAYEKGLAIDSNNAQIKSGLA 111
                 5566669****************999998776655 PP

  == domain 3  score: 2.4 bits;  conditional E-value: 0.43
      TPR_14   9 eallalGdpdeAiallrralalaPd 33 
                    +  +++d+Ai ++++a +l+ d
  KHJ34308.1 263 TQNYKMRNFDQAISHYNKAWELHKD 287
                 55567799**********9888876 PP

  == domain 4  score: 9.4 bits;  conditional E-value: 0.0025
      TPR_14   7 laeallalGdpdeAiallrralal 30 
                 l++++++ Gd+d+ i+++++a++ 
  KHJ34308.1 294 LGAVYFEKGDFDKCIEVCQQAIDE 317
                 799******************985 PP

  == domain 5  score: 0.5 bits;  conditional E-value: 1.7
      TPR_14   4 llalaeallalGdpdeAiallrralal 30 
                 +++++ a++  +d++ Ai  +++ l  
  KHJ34308.1 332 YARIGLAYEKKDDLESAISNYKKSLTE 358
                 788899***********9988887765 PP

  == domain 6  score: 11.3 bits;  conditional E-value: 0.00058
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeaw 38 
                  ++l+ a +   d+ +A++++ +++++aPdd++ +
  KHJ34308.1 392 ARELGNAKFKESDWPAAVEAYSEMIKRAPDDPRGY 426
                 678999999999*******************9976 PP

  == domain 7  score: 10.8 bits;  conditional E-value: 0.00085
      TPR_14   7 laeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 +a+a++ l ++  Ai+ +++a++++P++ +a+l+ aq
  KHJ34308.1 429 RAAAFMKLLEFPSAIDDCEKAIKKDPTFIRAYLRKAQ 465
                 6778888889999***********************9 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.1    0.0042       3.6      16      65 ..      15      56 ..       5      68 .. 0.67
   2 ?    6.6   0.1     0.011       9.3       8      75 ..      41     100 ..      35     102 .. 0.70
   3 ?    5.3   0.0     0.029        24       8      33 ..      75     100 ..      70     117 .. 0.73
   4 !    7.3   0.0    0.0068       5.8       8      33 ..     260     285 ..     253     288 .. 0.80
   5 !   34.6   0.0   2.1e-11   1.8e-08       6      72 ..     291     356 ..     287     357 .. 0.96
   6 ?    0.5   0.0      0.91   7.7e+02       8      28 ..     394     414 ..     387     449 .. 0.72
   7 ?    1.8   0.2      0.34   2.9e+02       4      33 ..     458     487 ..     455     511 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0042
      TPR_12 16 lgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAl 65
                 +++deA++++ +a++i      p+++       n + +y   ++y+ Al
  KHJ34308.1 15 EKNFDEAIKYFTEAIAIE-----PNNHI---LFSNRSAAYASKKDYQNAL 56
                678889999998888876.....44322...4555555555555555555 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.011
      TPR_12   8 nlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleealaia 75 
                 n+ a+++  ++y+ Al+  e +  i      pd+   a      g + + lg+++ A+ ++e+ lai+
  KHJ34308.1  41 NRSAAYASKKDYQNALSDAENVTTIK-----PDW---AKGWGRVGAAKHGLGDLDGARIAYEKGLAID 100
                 66667777777777777777776666.....776...5567777888888888888888888888875 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.029
      TPR_12   8 nlaavlrrlgrydeAlellekaleia 33 
                 +++a+ + lg++d A+  +ek l+i 
  KHJ34308.1  75 RVGAAKHGLGDLDGARIAYEKGLAID 100
                 56666777777777777777766665 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.0068
      TPR_12   8 nlaavlrrlgrydeAlellekaleia 33 
                 +l++  +++ ++d+A+++++ka e++
  KHJ34308.1 260 ELGTQNYKMRNFDQAISHYNKAWELH 285
                 68888899999999999999997665 PP

  == domain 5  score: 34.6 bits;  conditional E-value: 2.1e-11
      TPR_12   6 lnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeal 72 
                 lnnl+av+++ g++d+++e +++a++  r+++ + +   a ++  +g +y++ +++e A++ ++++l
  KHJ34308.1 291 LNNLGAVYFEKGDFDKCIEVCQQAIDEGREIYADFK-MIAKSYARIGLAYEKKDDLESAISNYKKSL 356
                 679********************************9.9***************************98 PP

  == domain 6  score: 0.5 bits;  conditional E-value: 0.91
      TPR_12   8 nlaavlrrlgrydeAlellek 28 
                 +l+++ ++  ++  A e + +
  KHJ34308.1 394 ELGNAKFKESDWPAAVEAYSE 414
                 566677777777777666655 PP

  == domain 7  score: 1.8 bits;  conditional E-value: 0.34
      TPR_12   4 talnnlaavlrrlgrydeAlellekaleia 33 
                 +a+ + a++++ + +y ++l+ + +a e+ 
  KHJ34308.1 458 RAYLRKAQAYFGMREYSKCLDVCTEASEAD 487
                 6788999***************99999986 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.1   0.00026      0.22       2      44 ..      13      55 ..      12      57 .. 0.82
   2 ?    5.7   0.1     0.024        21       5      34 ..      84     113 ..      80     118 .. 0.91
   3 !   18.8   0.0     2e-06    0.0017       3      57 ..     267     320 ..     265     330 .. 0.90
   4 !    7.7   0.4    0.0061       5.2      20      63 ..     382     427 ..     340     432 .. 0.78
   5 !   11.3   0.0   0.00045      0.38       9      54 ..     441     486 ..     437     489 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00026
      TPR_19  2 laegdyaeAlalleqalqedpknaearllLAeallalgqldeA 44
                +ae++++eA++++++a++ +p+n  +  +   a+ + ++++ A
  KHJ34308.1 13 IAEKNFDEAIKYFTEAIAIEPNNHILFSNRSAAYASKKDYQNA 55
                799*******************987777777777777766655 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.024
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAea 34 
                 gd++ A  ++e+ l+ d +na ++ +LA +
  KHJ34308.1  84 GDLDGARIAYEKGLAIDSNNAQIKSGLASV 113
                 9**************************965 PP

  == domain 3  score: 18.8 bits;  conditional E-value: 2e-06
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpd 57 
                 ++ ++++A++++ +a++   +  ++   L  ++++ g++d+ +++++++ +e + 
  KHJ34308.1 267 KMRNFDQAISHYNKAWELHKDIVYLNN-LGAVYFEKGDFDKCIEVCQQAIDEGRE 320
                 7899**************999999999.********************9998765 PP

  == domain 4  score: 7.7 bits;  conditional E-value: 0.0061
      TPR_19  20 e..dpknaearllLAeallalgqldeAealLdalpeedpddaryas 63 
                 +  dp+ ae +  L +a ++  ++ +A ++ ++  + +pdd+r  s
  KHJ34308.1 382 AyiDPQKAEEARELGNAKFKESDWPAAVEAYSEMIKRAPDDPRGYS 427
                 2449999999999999999999999999999999999999998765 PP

  == domain 5  score: 11.3 bits;  conditional E-value: 0.00045
      TPR_19   9 eAlalleqalqedpknaearllLAeallalgqldeAealLdalpee 54 
                 +A++  e+a+++dp   +a l+ A+a++ + ++ +  +++ ++ e+
  KHJ34308.1 441 SAIDDCEKAIKKDPTFIRAYLRKAQAYFGMREYSKCLDVCTEASEA 486
                 799999****************************999998888776 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0055       4.7      14      29 ..      17      32 ..      13      38 .. 0.80
   2 ?   -2.0   0.0       5.9     5e+03       7      20 ..      44      57 ..      37      60 .. 0.81
   3 ?   -1.9   0.0       5.5   4.7e+03      12      30 ..      83      99 ..      77     104 .. 0.77
   4 ?    4.9   0.0     0.037        32      12      31 ..     268     287 ..     266     288 .. 0.84
   5 !   15.9   0.0   1.1e-05    0.0096       2      31 ..     291     318 ..     290     325 .. 0.89
   6 !   10.6   0.0   0.00053      0.45       1      30 [.     331     360 ..     331     366 .. 0.86
   7 ?    4.1   0.0     0.068        58       5      35 ..     395     423 ..     393     424 .. 0.87
   8 ?    2.4   0.0      0.22   1.9e+02       2      33 ..     426     455 ..     426     458 .. 0.89
   9 ?    1.7   0.1      0.38   3.3e+02       1      29 [.     459     485 ..     459     492 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0055
       TPR_7 14 dyeeAielyeqsLalt 29
                +++eAi+++++++a++
  KHJ34308.1 17 NFDEAIKYFTEAIAIE 32
                89*********65554 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 5.9
       TPR_7  7 rlysrlGdyeeAie 20
                 +y +  dy++A++
  KHJ34308.1 44 AAYASKKDYQNALS 57
                57889999**9985 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 5.5
       TPR_7 12 lGdyeeAielyeqsLaltk 30
                lGd + A   ye+  +l+ 
  KHJ34308.1 83 LGDLDGARIAYEK--GLAI 99
                8999999999999..5553 PP

  == domain 4  score: 4.9 bits;  conditional E-value: 0.037
       TPR_7  12 lGdyeeAielyeqsLaltkd 31 
                 ++++++Ai++y ++ +l+kd
  KHJ34308.1 268 MRNFDQAISHYNKAWELHKD 287
                 79*********997788776 PP

  == domain 5  score: 15.9 bits;  conditional E-value: 1.1e-05
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkd 31 
                 L+nL+ +y++ Gd+++ ie+++q  a+++ 
  KHJ34308.1 291 LNNLGAVYFEKGDFDKCIEVCQQ--AIDEG 318
                 89*********************..77765 PP

  == domain 6  score: 10.6 bits;  conditional E-value: 0.00053
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLaltk 30 
                 ++ +++ +y++  d e Ai+ y++sL  ++
  KHJ34308.1 331 SYARIGLAYEKKDDLESAISNYKKSLTEHR 360
                 6899********************996555 PP

  == domain 7  score: 4.1 bits;  conditional E-value: 0.068
       TPR_7   5 LarlysrlGdyeeAielyeqsLaltkdpeda 35 
                 L+++ +++ d+  A+e y +   + ++p+d+
  KHJ34308.1 395 LGNAKFKESDWPAAVEAYSE--MIKRAPDDP 423
                 89999*************99..777777776 PP

  == domain 8  score: 2.4 bits;  conditional E-value: 0.22
       TPR_7   2 LlnLarlysrlGdyeeAielyeqsLaltkdpe 33 
                 ++n a ++ +l ++  Ai+ +e+  a+ kdp+
  KHJ34308.1 426 YSNRAAAFMKLLEFPSAIDDCEK--AIKKDPT 455
                 57889999999999*********..****996 PP

  == domain 9  score: 1.7 bits;  conditional E-value: 0.38
       TPR_7   1 aLlnLarlysrlGdyeeAielyeqsLalt 29 
                 a+l+ a++y+ +++y++ ++++++  a +
  KHJ34308.1 459 AYLRKAQAYFGMREYSKCLDVCTE--ASE 485
                 78999***********98888888..655 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   5.1e-06    0.0043       3      63 ..      44     104 ..      42     110 .. 0.91
   2 ?   -1.3   0.0       2.8   2.4e+03       3      20 ..     296     313 ..     294     317 .. 0.66
   3 ?   -2.6   0.0       7.3   6.3e+03      36      57 ..     336     357 ..     335     371 .. 0.64
   4 ?    0.3   0.0      0.96   8.2e+02      20      37 ..     380     397 ..     379     401 .. 0.83
   5 !   23.8   0.0   4.2e-08   3.5e-05       7      66 ..     401     460 ..     395     467 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 5.1e-06
       TPR_9   3 aiaireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdap 63 
                 a++++++d++ al  +e +  ++Pd +  +   G + + lG+l +A+ + e  la++ +++
  KHJ34308.1  44 AAYASKKDYQNALSDAENVTTIKPDWAKGWGRVGAAKHGLGDLDGARIAYEKGLAIDSNNA 104
                 6799********************************************9999888776555 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 2.8
       TPR_9   3 aiaireedweralavver 20 
                 a++ ++ d++++++v++ 
  KHJ34308.1 296 AVYFEKGDFDKCIEVCQQ 313
                 567777777777777664 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 7.3
       TPR_9  36 GlllaqlGclsaAladLeayla 57 
                 Gl++++ ++l+ A+      l 
  KHJ34308.1 336 GLAYEKKDDLESAISNYKKSLT 357
                 7788888888888776665555 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.96
       TPR_9  20 rllllaPddpeerrdRGl 37 
                 r  +++P+ +ee r+ G 
  KHJ34308.1 380 RAAYIDPQKAEEARELGN 397
                 678899999**9999996 PP

  == domain 5  score: 23.8 bits;  conditional E-value: 4.2e-08
       TPR_9   7 reedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapdae 66 
                  e dw++a +++  ++  aPddp+ +  R+ + ++l  +  A++d e ++ ++p    a+
  KHJ34308.1 401 KESDWPAAVEAYSEMIKRAPDDPRGYSNRAAAFMKLLEFPSAIDDCEKAIKKDPTFIRAY 460
                 689**************************************************9655554 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.0   0.2   0.00012       0.1       1      33 [.      24      56 ..      24      57 .. 0.94
   2 ?    3.0   0.0      0.18   1.6e+02       1      14 [.      92     105 ..      92     113 .. 0.88
   3 !    7.5   0.0     0.007         6      11      34 .]     286     309 ..     271     309 .. 0.87
   4 ?    0.6   0.0       1.1   9.3e+02      13      33 ..     329     349 ..     328     350 .. 0.90
   5 ?    3.1   0.0      0.17   1.5e+02       2      24 ..     412     434 ..     411     439 .. 0.87
   6 !   11.8   0.0   0.00029      0.25       2      24 ..     446     468 ..     445     500 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00012
      TPR_17  1 lylkaleldPnnadaynnLAelllknGdlmtAr 33
                ++++a++++Pnn  ++ n+  ++++++d++ A+
  KHJ34308.1 24 YFTEAIAIEPNNHILFSNRSAAYASKKDYQNAL 56
                589***************************996 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.18
      TPR_17   1 lylkaleldPnnad 14 
                 +y+k l++d nna 
  KHJ34308.1  92 AYEKGLAIDSNNAQ 105
                 5***********96 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.007
      TPR_17  11 nnadaynnLAelllknGdlmtArq 34 
                 ++ + +nnL+ ++ ++Gd++++++
  KHJ34308.1 286 KDIVYLNNLGAVYFEKGDFDKCIE 309
                 566789**************9986 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 1.1
      TPR_17  13 adaynnLAelllknGdlmtAr 33 
                 a++y   + +++k+ dl+ A+
  KHJ34308.1 329 AKSYARIGLAYEKKDDLESAI 349
                 789999**********99986 PP

  == domain 5  score: 3.1 bits;  conditional E-value: 0.17
      TPR_17   2 ylkaleldPnnadaynnLAelll 24 
                 y + +++ P+++  y n+A ++ 
  KHJ34308.1 412 YSEMIKRAPDDPRGYSNRAAAFM 434
                 77889**************9875 PP

  == domain 6  score: 11.8 bits;  conditional E-value: 0.00029
      TPR_17   2 ylkaleldPnnadaynnLAelll 24 
                 ++ka+++dP+   ay  +A+++ 
  KHJ34308.1 446 CEKAIKKDPTFIRAYLRKAQAYF 468
                 89******************996 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   0.00016      0.14      10      57 ..      15      60 ..       7      68 .. 0.91
   2 ?    6.7   0.7     0.014        12       7      66 ..      46     102 ..      45     104 .. 0.87
   3 ?    5.0   0.0     0.046        39       8      62 ..     266     316 ..     260     320 .. 0.78
   4 ?    3.1   0.0      0.18   1.5e+02       3      54 ..     294     349 ..     292     359 .. 0.72
   5 !   18.5   0.0   2.8e-06    0.0024       3      65 ..     395     454 ..     393     455 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00016
      TPR_16 10 agdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa.aly 57
                 +++d+A++++++a++     P ++    ++  a++ +++++ A+ ++ 
  KHJ34308.1 15 EKNFDEAIKYFTEAIAIE---PNNHILFSNRSAAYASKKDYQNALsDAE 60
                579***************...***********************97775 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.014
      TPR_16   7 alragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapd 66 
                 ++  +dy+ A+  +e ++      Pd a  +   g a   +g+l++A+ +y++ l+ +++
  KHJ34308.1  46 YASKKDYQNALSDAENVTTIK---PDWAKGWGRVGAAKHGLGDLDGARIAYEKGLAIDSN 102
                 667789***************...**9999999999999*********999997776665 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.046
      TPR_16   8 lragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalr 62 
                 ++ +++d+A+  ++ a ++++ + +    l++lg +++++g++++ +++++ a++
  KHJ34308.1 266 YKMRNFDQAISHYNKAWELHK-DIV---YLNNLGAVYFEKGDFDKCIEVCQQAID 316
                 678999999999999999993.333...788999999999999987777777665 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.18
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPd.......aaeAllllgdaalrqgrlaeAa 54 
                 l+  +++ gd+d+ +++ ++a++ +    +        a ++   g+a+ ++ +l+ A+
  KHJ34308.1 294 LGAVYFEKGDFDKCIEVCQQAIDEG---REiyadfkmIAKSYARIGLAYEKKDDLESAI 349
                 6777888888888888888888888...5544477777777777777777777777777 PP

  == domain 5  score: 18.5 bits;  conditional E-value: 2.8e-06
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraap 65 
                 l++a ++  d+++A++a+ + +kr+   Pd+++ + +++ a+ ++ +++ A++ +++a++ +p
  KHJ34308.1 395 LGNAKFKESDWPAAVEAYSEMIKRA---PDDPRGYSNRAAAFMKLLEFPSAIDDCEKAIKKDP 454
                 899**********************...99999**********************99999988 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0      0.12        99      16      31 ..      16      31 ..      12      32 .. 0.92
   2 ?    2.0   0.0      0.24     2e+02       6      26 ..      40      60 ..      39      65 .. 0.87
   3 ?    1.4   0.0      0.36   3.1e+02       9      31 ..      77      99 ..      76     100 .. 0.87
   4 ?    1.7   0.0      0.31   2.6e+02      13      35 ..     266     288 ..     261     289 .. 0.89
   5 !   14.8   0.0   2.3e-05      0.02       4      34 ..     290     320 ..     288     324 .. 0.89
   6 ?   -1.1   0.0       2.3   1.9e+03       2      30 ..     329     357 ..     328     360 .. 0.82
   7 ?   -0.4   0.0       1.4   1.2e+03       5      30 ..     426     451 ..     426     452 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.12
      TPR_10 16 grydeAealleealai 31
                +++deA +++ ea+ai
  KHJ34308.1 16 KNFDEAIKYFTEAIAI 31
                689***********97 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.24
      TPR_10  6 nNLanalrqrgrydeAealle 26
                +N ++a+ + ++y+ A+ ++e
  KHJ34308.1 40 SNRSAAYASKKDYQNALSDAE 60
                57889************9988 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.36
      TPR_10  9 analrqrgrydeAealleealai 31
                ++a + +g++d+A+  +e+ lai
  KHJ34308.1 77 GAAKHGLGDLDGARIAYEKGLAI 99
                5677889***********99986 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.31
      TPR_10  13 rqrgrydeAealleealairrrl 35 
                 ++++++d+A  ++ +a ++++ +
  KHJ34308.1 266 YKMRNFDQAISHYNKAWELHKDI 288
                 6799**************99865 PP

  == domain 5  score: 14.8 bits;  conditional E-value: 2.3e-05
      TPR_10   4 slnNLanalrqrgrydeAealleealairrr 34 
                  lnNL++++++ g++d+  + +++a++  r+
  KHJ34308.1 290 YLNNLGAVYFEKGDFDKCIEVCQQAIDEGRE 320
                 59***********************987666 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 2.3
      TPR_10   2 AsslnNLanalrqrgrydeAealleeala 30 
                 A s+  ++ a+ +  +++ A   ++++l 
  KHJ34308.1 329 AKSYARIGLAYEKKDDLESAISNYKKSLT 357
                 77888999999999999999998888886 PP

  == domain 7  score: -0.4 bits;  conditional E-value: 1.4
      TPR_10   5 lnNLanalrqrgrydeAealleeala 30 
                 ++N a+a  ++ ++  A +++e+a+ 
  KHJ34308.1 426 YSNRAAAFMKLLEFPSAIDDCEKAIK 451
                 68899999999999**********95 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.065        55      14      32 ..      16      34 ..       5      35 .. 0.87
   2 ?   -1.5   0.0       6.3   5.4e+03       9      27 ..      45      63 ..      42      68 .. 0.77
   3 ?    0.0   0.0         2   1.7e+03      13      25 ..      83      95 ..      75      95 .. 0.81
   4 ?    1.9   0.0       0.5   4.2e+02       7      27 ..     262     282 ..     260     287 .. 0.79
   5 ?    6.6   0.0     0.017        14       6      29 ..     294     317 ..     293     317 .. 0.91
   6 ?    4.9   0.0     0.054        46       3      25 ..     332     354 ..     330     359 .. 0.84
   7 !    8.6   0.0    0.0036       3.1       6      32 ..     395     421 ..     393     422 .. 0.92
   8 ?   -2.1   0.0       9.4     8e+03       9      31 ..     432     454 ..     428     455 .. 0.71
   9 ?    2.4   0.2      0.34   2.9e+02       2      21 ..     459     478 ..     458     484 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.065
                HHHHHHHHHHHHHHHH-TT CS
       TPR_6 14 gdtdkAlealerlikeYPd 32
                ++ d+A++++ + i   P+
  KHJ34308.1 16 KNFDEAIKYFTEAIAIEPN 34
                699***********99998 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 6.3
                HHHHHHHHHHHHHHHHHHH CS
       TPR_6  9 syrklgdtdkAlealerli 27
                +y + +d+++Al   e++ 
  KHJ34308.1 45 AYASKKDYQNALSDAENVT 63
                5666789999998888776 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 2
                HHHHHHHHHHHHH CS
       TPR_6 13 lgdtdkAlealer 25
                lgd d A+ a+e+
  KHJ34308.1 83 LGDLDGARIAYEK 95
                79*********96 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.5
                 HHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAlealerli 27 
                 +   +k+ + d+A+  +++  
  KHJ34308.1 262 GTQNYKMRNFDQAISHYNKAW 282
                 66678888*******999875 PP

  == domain 5  score: 6.6 bits;  conditional E-value: 0.017
                 HHHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   6 lalsyrklgdtdkAlealerlike 29 
                 l+  y++ gd dk +e  ++ i+e
  KHJ34308.1 294 LGAVYFEKGDFDKCIEVCQQAIDE 317
                 8999***89***********9986 PP

  == domain 6  score: 4.9 bits;  conditional E-value: 0.054
                 HHHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   3 lyklalsyrklgdtdkAlealer 25 
                 + +++l+y+k +d + A+  +++
  KHJ34308.1 332 YARIGLAYEKKDDLESAISNYKK 354
                 569*******99******99987 PP

  == domain 7  score: 8.6 bits;  conditional E-value: 0.0036
                 HHHHHHHHHHHHHHHHHHHHHHHH-TT CS
       TPR_6   6 lalsyrklgdtdkAlealerlikeYPd 32 
                 l+ + +k  d+ +A+ea+ + ik+ Pd
  KHJ34308.1 395 LGNAKFKESDWPAAVEAYSEMIKRAPD 421
                 788999988*****************9 PP

  == domain 8  score: -2.1 bits;  conditional E-value: 9.4
                 HHHH.HHHHHHHHHHHHHHHHH-T CS
       TPR_6   9 syrk.lgdtdkAlealerlikeYP 31 
                 ++ k l +   A++  e+ ik+ P
  KHJ34308.1 432 AFMKlL-EFPSAIDDCEKAIKKDP 454
                 555545.67778888999999988 PP

  == domain 9  score: 2.4 bits;  conditional E-value: 0.34
                 HHHHHHHHHHHHHHHHHHHH CS
       TPR_6   2 AlyklalsyrklgdtdkAle 21 
                 A+++ a++y+ + +++k l+
  KHJ34308.1 459 AYLRKAQAYFGMREYSKCLD 478
                 99********9989999876 PP

>> Fis1_TPR_C  Fis1 C-terminal tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.0     0.011       9.4      15      35 ..      16      36 ..       9      37 .. 0.96
   2 ?   -0.2   0.0       1.2   1.1e+03       8      34 ..      43      69 ..      41      71 .. 0.85
   3 ?    1.5   0.0      0.38   3.3e+02      11      46 ..      80     115 ..      76     121 .. 0.79
   4 ?    0.1   0.0      0.99   8.5e+02      11      21 ..     265     275 ..     261     284 .. 0.86
   5 ?   -0.7   0.0       1.8   1.6e+03       8      34 ..     430     456 ..     428     459 .. 0.85
   6 ?    2.7   0.1      0.15   1.3e+02       8      24 ..     464     480 ..     460     485 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.011
                T-HHHHHHHHHHHHHHTTS-H CS
  Fis1_TPR_C 15 geYseArryvdalLeiEPenr 35
                ++++eA +y    ++iEP+n+
  KHJ34308.1 16 KNFDEAIKYFTEAIAIEPNNH 36
                79******************7 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1.2
                HHHHHHHT-HHHHHHHHHHHHHHTTS- CS
  Fis1_TPR_C  8 AlGhyklgeYseArryvdalLeiEPen 34
                + +++  ++Y++A+  ++ +  i P++
  KHJ34308.1 43 SAAYASKKDYQNALSDAENVTTIKPDW 69
                66888889******9999998888887 PP

  == domain 3  score: 1.5 bits;  conditional E-value: 0.38
                 HHHHT-HHHHHHHHHHHHHHTTS-HHHHHHHHHHHH CS
  Fis1_TPR_C  11 hyklgeYseArryvdalLeiEPenrQaqsLkelied 46 
                 +  lg+ + Ar   +  L+i+ +n Q +s  + +++
  KHJ34308.1  80 KHGLGDLDGARIAYEKGLAIDSNNAQIKSGLASVKR 115
                 556999999*****************9985555555 PP

  == domain 4  score: 0.1 bits;  conditional E-value: 0.99
                 HHHHT-HHHHH CS
  Fis1_TPR_C  11 hyklgeYseAr 21 
                 +yk++++++A 
  KHJ34308.1 265 NYKMRNFDQAI 275
                 8*******995 PP

  == domain 5  score: -0.7 bits;  conditional E-value: 1.8
                 HHHHHHHT-HHHHHHHHHHHHHHTTS- CS
  Fis1_TPR_C   8 AlGhyklgeYseArryvdalLeiEPen 34 
                 A + +kl e+  A   ++  ++++P +
  KHJ34308.1 430 AAAFMKLLEFPSAIDDCEKAIKKDPTF 456
                 678889999999999999999999975 PP

  == domain 6  score: 2.7 bits;  conditional E-value: 0.15
                 HHHHHHHT-HHHHHHHH CS
  Fis1_TPR_C   8 AlGhyklgeYseArryv 24 
                 A +++ ++eYs+++  +
  KHJ34308.1 464 AQAYFGMREYSKCLDVC 480
                 6699*********9988 PP

>> ANAPC8  Anaphase promoting complex subunit 8 / Cdc23
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   7.6     0.021        18      75     126 ..     458     521 ..     235     528 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.021
                 HHHH.HHHHHHHTT-HHHHHHH...............TTT--SHHHHHHHHHHHHHHHHHHC------ CS
      ANAPC8  75 dkYl.lAkslFDckEfdrcaav...............lkdelsqkslFLalYakylagekrkeEesem 126
                  +Yl  A+++F ++E+ +c  v                 ++++q     al a+y a e  +eE++++
  KHJ34308.1 458 RAYLrKAQAYFGMREYSKCLDVcteaseaditknntkEIEAQQQ----KALHAMYSARENETEEQTKE 521
                 45552488999999999999998888888887655322222222....35678888888888887765 PP

>> SHNi-TPR  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.0   0.0    0.0045       3.8       6      30 ..       7      31 ..       5      34 .. 0.91
   2 ?   -3.4   0.0       8.3   7.1e+03      22      28 ..      50      56 ..      50      57 .. 0.87
   3 ?    4.0   0.0     0.039        33      16      30 ..     270     284 ..     269     286 .. 0.89
   4 ?   -0.6   0.0       1.1   9.3e+02      20      28 ..     348     356 ..     346     357 .. 0.88
   5 ?   -3.0   0.0       5.9   5.1e+03      17      29 ..     439     451 ..     439     451 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0045
    SHNi-TPR  6 lLGEislEnenFpqAveDlrkaLeL 30
                 LG+ s+   nF++A++ +++a+++
  KHJ34308.1  7 ALGNKSIAEKNFDEAIKYFTEAIAI 31
                5899999**************9987 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 8.3
    SHNi-TPR 22 eDlrkaL 28
                +D++ aL
  KHJ34308.1 50 KDYQNAL 56
                7****99 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.039
    SHNi-TPR  16 nFpqAveDlrkaLeL 30 
                 nF+qA++ ++ka eL
  KHJ34308.1 270 NFDQAISHYNKAWEL 284
                 9*********99665 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 1.1
    SHNi-TPR  20 AveDlrkaL 28 
                 A+++++k+L
  KHJ34308.1 348 AISNYKKSL 356
                 99******9 PP

  == domain 5  score: -3.0 bits;  conditional E-value: 5.9
    SHNi-TPR  17 FpqAveDlrkaLe 29 
                 Fp A+ D +ka++
  KHJ34308.1 439 FPSAIDDCEKAIK 451
                 999****999975 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.2       1.2   9.9e+02       3      44 ..      16      57 ..      14      66 .. 0.57
   2 ?   11.6   0.6   0.00029      0.24       3      65 ..     269     331 ..     265     352 .. 0.73
   3 ?    0.4   0.0      0.93   7.9e+02       7      49 ..     374     415 ..     369     424 .. 0.82
   4 ?    7.8   0.3    0.0045       3.8      12      52 ..     446     487 ..     435     511 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 1.2
                T-HHHHHHHHHHHH.HHH--HHHHHHH..HHHHHHTT-HHHHHH CS
      ANAPC3  3 nnyknAiflaerllaaetespedayll..AlclylngqykrAye 44
                +n+++Ai ++  + a e++  +++++   + ++ + ++y+ A+ 
  KHJ34308.1 16 KNFDEAIKYFTEAIAIEPN--NHILFSnrSAAYASKKDYQNALS 57
                5777777777777732222..22222134666677777777765 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00029
                 T-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHHHC-HHHHHHHHHH CS
      ANAPC3   3 nnyknAiflaerllaaetespedayllAlclylngqykrAyellrka.klnskslgcrylfAqc 65 
                 +n++ Ai +++++    +++   +  l+ ++++ g++++++e++++a ++  +  +    +A++
  KHJ34308.1 269 RNFDQAISHYNKAW-ELHKDIVYLNNLGAVYFEKGDFDKCIEVCQQAiDEGREIYADFKMIAKS 331
                 68888999999999.555555555558********************66655555544444444 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.93
                 HHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT CS
      ANAPC3   7 nAiflaerllaaetespedayllAlclylngqykrAyellrka 49 
                 + i  a  ++  +++ +e a  l+ + ++ +++  A e ++++
  KHJ34308.1 374 KKIENARAAY-IDPQKAEEARELGNAKFKESDWPAAVEAYSEM 415
                 5566677788.899999999999**********9999998887 PP

  == domain 4  score: 7.8 bits;  conditional E-value: 0.0045
                 HHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCT.SHH CS
      ANAPC3  12 aerllaaetespedayllAlclylngqykrAyellrka.kln 52 
                 +e++ ++++    + + +A++++ + +y ++++++ +a + +
  KHJ34308.1 446 CEKAIKKDPTFIRAYLRKAQAYFGMREYSKCLDVCTEAsEAD 487
                 677776666666666668****************99995554 PP

>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0         3   2.6e+03     125     153 ..      14      42 ..       8      94 .. 0.75
   2 ?   13.9   0.5   3.8e-05     0.033      40     119 ..     292     372 ..     263     374 .. 0.91
   3 ?   -1.4   0.0       1.9   1.6e+03      21      64 ..     374     417 ..     373     421 .. 0.86
   4 ?    1.6   0.9      0.23   1.9e+02      16     105 ..     409     502 ..     398     516 .. 0.71
   5 ?   -0.8   0.3       1.3   1.1e+03       6      35 ..     494     523 ..     482     533 .. 0.59

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 3
                 HTT-HHHHHHHHCTS-GGGT.TTT--HHH CS
        RPN7 125 airkfkeAaellldilstftskellsyed 153
                 a ++f eA + + ++ +   ++ +l +++
  KHJ34308.1  14 AEKNFDEAIKYFTEAIAIEPNNHILFSNR 42 
                 55667777777766665555555544444 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 3.8e-05
                 HHHHHHHHHCT-HHHHHHHHHTCCCC--SHHHHHHHH.HHHHHHHHHTT-HHHHHHHHHHHHCSSS---.HHHHHHHHHHH CS
        RPN7  40 ldlaehYlkigdleeAlkaysrireyctslkhkidml.lnlirvaiffndwdlvskylekakellekggdwerknrlkvye 119
                 ++l+  Y++ gd++++++ +++++++     + ++m+  +  r++++++ +d +++ ++  k++l +    e+ n+l+++e
  KHJ34308.1 292 NNLGAVYFEKGDFDKCIEVCQQAIDEGREIYADFKMIaKSYARIGLAYEKKDDLESAISNYKKSLTEHRIPETVNKLRAAE 372
                 68999*****************************99725789*************************99999999999885 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 1.9
                 HHHHHHHHTT-HHHHHHHHHHHHHHHHHCT-HHHHHHHHHTCCC CS
        RPN7  21 aelkdakenlgkeeirrakldlaehYlkigdleeAlkaysrire 64 
                 +++++a+  +++ + ++   +l++  +k  d   A++ays++++
  KHJ34308.1 374 KKIENARAAYIDPQKAEEARELGNAKFKESDWPAAVEAYSEMIK 417
                 6788888889999999999999999999999999*****99875 PP

  == domain 4  score: 1.6 bits;  conditional E-value: 0.23
                 HHHHHHHHHHHH.HTT-HHHHHHHHHHHHHHHHHCT-HHHHHHHHHT.CCCC--SHHHHHHH..HHHHHHHHHHTT-HHHHHHHHHHHHCSSS- CS
        RPN7  16 leeLdaelkdak.enlgkeeirrakldlaehYlkigdleeAlkaysr.ireyctslkhkidm..llnlirvaiffndwdlvskylekakellek 105
                 +e+  + +k+a  +  g ++ ++a  +l e+   i d+e+A+k     ir y+ ++++ + m  + + + v+ ++ + d  +++++++++  +k
  KHJ34308.1 409 VEAYSEMIKRAPdDPRGYSNRAAAFMKLLEFPSAIDDCEKAIKKDPTfIRAYLRKAQAYFGMreYSKCLDVCTEASEADITKNNTKEIEAQQQK 502
                 5566666666665566777778888888888888999999998877778888888777776655677777777777777777777777776666 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHHHHHHHHHHHHHTT-HHHH CS
        RPN7   6 eelrkknekeleeLdaelkdakenlgkeei 35 
                 +e++++ +k l ++ +  ++  e+++ke i
  KHJ34308.1 494 KEIEAQQQKALHAMYSARENETEEQTKERI 523
                 344445555555555555555555555555 PP

>> XPC-binding  XPC-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.73   6.3e+02      35      47 ..     140     152 ..     138     157 .. 0.87
   2 ?    6.4   2.2    0.0088       7.5       5      27 ..     533     555 ..     531     566 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.73
  XPC-binding  35 nPqllqlIqqnqe 47 
                  +Pq++q +++n+ 
   KHJ34308.1 140 DPQIFQKLASNPK 152
                  8999999999985 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0088
  XPC-binding   5 rnnpqFqqlRqlvqqnPqlLqpl 27 
                  +++p +q + q  q++P++Lq+ 
   KHJ34308.1 533 MQDPVMQSILQQAQSDPAALQEH 555
                  789*****************985 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.1      0.02        17      17      39 ..      15      30 ..       7      54 .. 0.68
   2 ?    0.3   0.1      0.87   7.4e+02       2      18 ..     107     123 ..     106     124 .. 0.88
   3 ?    0.9   0.0      0.56   4.8e+02      18      33 ..     269     284 ..     263     289 .. 0.87
   4 ?   -2.1   0.0       4.9   4.2e+03      21      39 ..     305     316 ..     300     320 .. 0.51
   5 ?    5.6   1.9      0.02        17       4      32 ..     329     357 ..     328     394 .. 0.80
   6 ?   -2.7   0.0       7.6   6.5e+03      17      29 ..     402     414 ..     401     416 .. 0.83
   7 ?   -2.2   0.0       5.4   4.6e+03      30      56 ..     442     467 ..     440     469 .. 0.68
   8 ?    0.4   0.1      0.81   6.9e+02      26      47 ..     472     495 ..     470     511 .. 0.67

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.02
         MIT 17 agnyeeAlelYkealelLlqalk 39
                ++n++eA+++++ea+       +
  KHJ34308.1 15 EKNFDEAIKYFTEAI-------A 30
                456666666666655.......4 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.87
         MIT   2 dkAlelvkkAveeDnag 18 
                 +++l+ vk+A e+D +g
  KHJ34308.1 107 KSGLASVKRALEADANG 123
                 78999*********986 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.56
         MIT  18 gnyeeAlelYkealel 33 
                  n++ A++ Y +a el
  KHJ34308.1 269 RNFDQAISHYNKAWEL 284
                 69999******99876 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 4.9
         MIT  21 eeAlelYkealelLlqalk 39 
                 +       +++e+++qa+ 
  KHJ34308.1 305 D-------KCIEVCQQAID 316
                 3.......34444444443 PP

  == domain 5  score: 5.6 bits;  conditional E-value: 0.02
         MIT   4 AlelvkkAveeDnagnyeeAlelYkeale 32 
                 A ++++    ++++ + e A+++Yk++l 
  KHJ34308.1 329 AKSYARIGLAYEKKDDLESAISNYKKSLT 357
                 6678888899****************996 PP

  == domain 6  score: -2.7 bits;  conditional E-value: 7.6
         MIT  17 agnyeeAlelYke 29 
                 + ++++A+e+Y+e
  KHJ34308.1 402 ESDWPAAVEAYSE 414
                 568999*****86 PP

  == domain 7  score: -2.2 bits;  conditional E-value: 5.4
         MIT  30 alelLlqalkekneerrellrekieeY 56 
                 a++ + +a+k k+++   ++ +k++ Y
  KHJ34308.1 442 AIDDCEKAIK-KDPTFIRAYLRKAQAY 467
                 7777778887.6766666666666666 PP

  == domain 8  score: 0.4 bits;  conditional E-value: 0.81
         MIT  26 lYkealelLlqalk.e..kneerre 47 
                  Y+++l+++++a      kn +++e
  KHJ34308.1 472 EYSKCLDVCTEASEaDitKN-NTKE 495
                 59999999999998546433.3322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (578 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1380  (0.0769703); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              21  [number of targets reported over threshold]
# CPU time: 0.67u 0.32s 00:00:00.99 Elapsed: 00:00:00.48
# Mc/sec: 3603.90
//
Query:       KHJ34309.1  [L=185]
Description: putative nedd8-conjugating enzyme ubc12 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-38  132.1   0.0    1.4e-38  131.7   0.0    1.2  1  UQ_con    Ubiquitin-conjugating enzyme


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.7   0.0     8e-43   1.4e-38       1     139 [.      34     168 ..      34     169 .. 0.94

  Alignments for each domain:
  == domain 1  score: 131.7 bits;  conditional E-value: 8e-43
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGGGSTTT--TTSHHHH CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldiLkeekWspaltles 99 
                 r qk+l+el + ++++++  +  d +  ++k++i++ ++++Y+gg F++++++++++P+++Pkvk++ ki+HPn+d +G+vcl+iL+e+ W+p+l+l+s
  KHJ34309.1  34 RAQKDLSEL-SLPSNMFTEFPDPD-DTLNFKLTIMP-DEGMYKGGRFQFTFSISQNFPHEAPKVKCIEKIYHPNIDLDGNVCLNILRED-WKPVLNLQS 128
                 568888886.77888888888886.**********9.**************************************************55.********* PP

                 HHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHHH CS
      UQ_con 100 vllsiqsLlaepnpesplnkeaakllkkdreeykkkvkey 139
                 v++ +q L+ epn ++plnkeaa++l+++re +k++v+++
  KHJ34309.1 129 VVVGLQFLFLEPNSSDPLNKEAAEDLRNHREIFKRNVRNS 168
                 *************************************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1288  (0.0718389); expected 358.6 (0.02)
Passed bias filter:                      713  (0.039768); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 1349.78
//
Query:       KHJ34310.1  [L=233]
Description: putative ras-2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.3e-52  176.9   0.1    5.5e-52  175.6   0.1    1.5  1  Ras          Ras family
    1.3e-17   64.1   0.0    1.9e-16   60.3   0.0    2.1  2  Roc          Ras of Complex, Roc, domain of DAPkinase
    0.00023   20.7   0.0    0.00046   19.7   0.0    1.6  1  Arf          ADP-ribosylation factor family
  ------ inclusion threshold ------
      0.022   14.3   0.0       0.46   10.0   0.0    2.2  2  FeoB_N       Ferrous iron transport protein B
      0.023   14.6   0.0        8.2    6.3   0.0    2.3  2  RsgA_GTPase  RsgA GTPase
      0.058   12.9   0.2        1.3    8.5   0.0    2.8  2  GTP_EFTU     Elongation factor Tu GTP binding domain
      0.062   13.7   0.1       0.15   12.5   0.0    1.5  1  AAA_16       AAA ATPase domain
      0.062   13.4   0.0      0.086   12.9   0.0    1.3  1  MMR_HSR1     50S ribosome-binding GTPase
       0.15   11.5   0.0       0.54    9.7   0.0    1.8  2  SRPRB        Signal recognition particle receptor beta subuni


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.6   0.1   2.8e-55   5.5e-52       1     161 [.       9     187 ..       9     188 .. 0.98

  Alignments for each domain:
  == domain 1  score: 175.6 bits;  conditional E-value: 2.8e-55
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 Klv++Gd++vGKt+l+++ + ++F e+y++Ti +d+y+k++ +dg+++ le++DTAGqee+++lr++ +rd+eg++lvy+i+sr+sf+++++++++i+r
  KHJ34310.1   9 KLVVLGDGGVGKTALTIQLTLQHFVETYDPTI-EDSYRKQVAIDGQSCMLEVLDTAGQEEYTALRDQWIRDGEGFVLVYSISSRSSFTRINRFHDQIQR 106
                 99******************************.****************************************************************** PP

                 HST...................TTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHHH CS
         Ras 100 vae...................envpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 v+e                      pi+LvGnK+D  ++r+vst+eg +la+elg+ f+e+SAk++ nve+af++++r+++
  KHJ34310.1 107 VKEssassssyagsplmskapdCPAPIMLVGNKSDRITEREVSTQEGYALARELGCDFVEASAKNSINVEKAFYDVVRQLR 187
                 **99*************999886799****************************************************985 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.3   0.0   9.8e-20   1.9e-16       1     108 [.       9     110 ..       9     116 .. 0.87
   2 ?    1.4   0.0      0.17   3.4e+02     109     119 ..     131     141 ..     122     142 .. 0.80

  Alignments for each domain:
  == domain 1  score: 60.3 bits;  conditional E-value: 9.8e-20
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE..GH.HHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd..sr.ssenlk 96 
                 K+v++Gd+gvGKt l  +++ ++f e++++ti  ++  k+v  i+g       +++ l++ DtaGqe++ +l++ ++r+ + ++lvy   sr s+++++
  KHJ34310.1   9 KLVVLGDGGVGKTALTIQLTLQHFVETYDPTIEDSYR-KQV-AIDG-------QSCMLEVLDTAGQEEYTALRDQWIRDGEGFVLVYSisSRsSFTRIN 98 
                 99*******************************9986.555.4555.......5799******************************976442568899 PP

                 HHHHHHHHHCSS CS
         Roc  97 eWlkelkkvagk 108
                 +  +++++v ++
  KHJ34310.1  99 RFHDQIQRVKES 110
                 999999988765 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.17
                 S-EEEEEE-TT CS
         Roc 109 spvilvgnkiD 119
                 +p++lvgnk D
  KHJ34310.1 131 APIMLVGNKSD 141
                 589******99 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   2.3e-07   0.00046      15     111 ..       8     111 ..       1     179 [. 0.78

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 2.3e-07
                 EEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEEE.EEEEE..TTEEEEEEEE-SSGGGGGGGGGGCTTESEEE..EEEETT.-CTTHHHHHHHHHH CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvt.tvPTigfnv.eelei..knlkftvwDvGGqeklRplWknYfektdavi..fvvDsa.dreRleeakeeLka 106
                 +++++lG  + GKt +  +l+l+++v+   PTi     ++++i  +   ++v D  Gqe+   l +++ ++ ++ +  + + s    +R++  ++++++
  KHJ34310.1   8 YKLVVLGDGGVGKTALTIQLTLQHFVEtYDPTIEDSYrKQVAIdgQSCMLEVLDTAGQEEYTALRDQWIRDGEGFVlvYSISSRsSFTRINRFHDQIQR 106
                 799*******************99987367***8765266777557899***********999999999999986511556554134688888888887 PP

                 HCTSG CS
         Arf 107 lleee 111
                 + e++
  KHJ34310.1 107 VKESS 111
                 76555 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.054   1.1e+02       2      23 ..       9      30 ..       8      79 .. 0.78
   2 ?   10.0   0.0   0.00023      0.46     103     151 ..     128     177 ..     120     182 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.054
                EEEEEESTTSSHHHHHHHHHTT CS
      FeoB_N  2 tvalvGnpnvGkttlfnaltga 23
                +++++G+  vGkt+l  +lt +
  KHJ34310.1  9 KLVVLGDGGVGKTALTIQLTLQ 30
                57899**********9999854 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00023
                 HTTSSEEEEEETHHHHHHTTEEE-H.HHHHHHHTS-EEEEBTTTTBTHHH CS
      FeoB_N 103 elgvpvvlalnmideaekkgieidl.kkLsekLgvpvvktsakkkegiee 151
                 +  +p++l+ n++d +++++++ ++  +L+++Lg++ v++sak++ ++e+
  KHJ34310.1 128 DCPAPIMLVGNKSDRITEREVSTQEgYALARELGCDFVEASAKNSINVEK 177
                 6667899999******999988765269****************999987 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0    0.0052        10     102     122 ..      10      30 ..       5      47 .. 0.84
   2 ?    6.3   0.0    0.0041       8.2      47      92 ..     131     177 ..     121     192 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0052
                  EEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpe 122
                   v++G  GvGK++L  +l+ +
   KHJ34310.1  10 LVVLGDGGVGKTALTIQLTLQ 30 
                  5899**********9888765 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0041
                  -EEEEEEE-GGG--HHH.HHHHHHHHHHHTTSEEEE--TTTHTTHHH CS
  RsgA_GTPase  47 iepvivlnKiDlleeee.eleelkeelealgyevllvsaktkeglee 92 
                  +++++v nK D ++e+e +++e  +  ++lg++++  sak++ ++e+
   KHJ34310.1 131 APIMLVGNKSDRITEREvSTQEGYALARELGCDFVEASAKNSINVEK 177
                  5788999**********7778888999************99887765 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1      0.13   2.6e+02       6      26 ..      10      30 ..       7      44 .. 0.85
   2 ?    8.5   0.0   0.00066       1.3      65     105 ..      49      90 ..      22     189 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.13
                EEEEESTTSSHHHHHHHHHHH CS
    GTP_EFTU  6 igiighvDhGKtTLtdrLlyk 26
                ++++g+   GKt Lt +L+ +
  KHJ34310.1 10 LVVLGDGGVGKTALTIQLTLQ 30
                78999999*******999876 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00066
                 T.TCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTT CS
    GTP_EFTU  65 k.etkkylinliDtPGHvdFskevirglrvlDgavlvvdave 105
                 + +++++ + ++Dt G ++++    + +r  +g vlv ++++
  KHJ34310.1  49 AiDGQSCMLEVLDTAGQEEYTALRDQWIRDGEGFVLVYSISS 90 
                 2369999******************************98774 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   7.4e-05      0.15      27     104 ..      10     107 ..       9     136 .. 0.55

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 7.4e-05
      AAA_16  27 vllsGesGvGKsslv.rellralekd..................ggiflrgkcdqlesa............ipy.salaqalareellrqlldeaesae 93 
                 +++ G+ GvGK++l  +  l+++ ++                             +               +++ +++++  +   l+  + ++++ + 
  KHJ34310.1  10 LVVLGDGGVGKTALTiQLTLQHFVETydptiedsyrkqvaidgqS----------C--MlevldtagqeeyTALrDQWIRDGEGFVLVYSISSRSSFTR 96 
                 689***********9777777777774444444433333332210..........1..01111111121222222444444444455555555555555 PP

      AAA_16  94 leawrekleea 104
                  ++++++++++
  KHJ34310.1  97 INRFHDQIQRV 107
                 55555555544 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   4.3e-05     0.086       2      97 ..      10     101 ..       9     139 .. 0.70

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.3e-05
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEE..EEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgke..ielvDtpGliegaseekglgkaflaleeadlillvvdaseeklkpldeel 97 
                  +++G   vGK+ L  +lt +   v+ +  t  d  +++v+++g++  +e++Dt+G  e   e   l++++ +  e  ++++ ++++ ++++++++  
  KHJ34310.1  10 LVVLGDGGVGKTALTIQLTLQ-HFVETYDPTIEDSYRKQVAIDGQScmLEVLDTAG-QE---EYTALRDQWIRDGEGFVLVYSISSR-SSFTRINRFH 101
                 6899**************996.4577788888888888888888654479******.55...4448999999888766666666644.3344333222 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00027      0.54       6      62 ..      10      68 ..       7      97 .. 0.80
   2 ?   -1.0   0.0      0.49   9.8e+02     113     141 ..     131     160 ..     123     188 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00027
                EEEE-STTSSHHHHHHHHHHSS---B---S.S-EEETTG....GGTT-SEEEETT-GCC CS
       SRPRB  6 vllvGlsdsGKTslftrLttdsvkktvtSq.essaalkv.ksekgskltliDfPGhekl 62
                ++++G    GKT+l  +Lt +++ +t+    e s  ++v  + +  +l+++D  G+e+ 
  KHJ34310.1 10 LVVLGDGGVGKTALTIQLTLQHFVETYDPTiEDSYRKQVaIDGQSCMLEVLDTAGQEEY 68
                578899999*****************987768888888834456678899999998864 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.49
                 --EEEEEE-TTSTT---HHHHHH.HHHHHH CS
       SRPRB 113 vdiliACnKqelflakspklikd.aLEkEl 141
                  +i++  nK++  + ++ +     aL +El
  KHJ34310.1 131 APIMLVGNKSDRITEREVSTQEGyALAREL 160
                 579999999999998876654332555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 1793.21
//
Query:       KHJ34311.1  [L=384]
Description: hypothetical protein EV44_g5308 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 3111.42
//
Query:       KHJ34312.1  [L=574]
Description: putative acetylcholinesterase precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.6e-74  249.1   0.0    1.3e-73  248.6   0.0    1.2  1  COesterase     Carboxylesterase family
    4.2e-08   33.3   0.0    3.7e-07   30.2   0.0    2.0  1  Abhydrolase_3  alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> COesterase  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.6   0.0   1.5e-77   1.3e-73       3     489 ..      41     543 ..      39     565 .. 0.84

  Alignments for each domain:
  == domain 1  score: 248.6 bits;  conditional E-value: 1.5e-77
                 SEEEETTEEEEEEEEEESTCSEEEEEEEEESSB---GGGTTS--BE----SSEEECBS---BESEECSSSSSCGHHCHHH................... CS
  COesterase   3 pvvetslGkvrGkrvklksekevdaFlGiPYAepPvgelRFkkPepaepwtgvrdAtkfspaCpqnaeksekeekeleaw................... 82 
                 p+v++++   +G+ v++    ++++F  i+YA+pP+g+lRF++P++    + +++  + +++C+q   ++ + + ++ +                    
  KHJ34312.1  41 PIVDLQYTLHQGTLVESG---KYYSFSNIRYAAPPIGNLRFAPPVA-PAINRTLNNGEKAAVCAQGSPFWGNLMIKNLMGvgleqlkkdeeelellkks 135
                 666777777777777733...89**********************9.88999****************99998877666699***************** PP

                 ...............BES---EEEEEEESSSSSTTSSEEEEEEE--STTTS-BGCG.S-THHHHHHH.....TSEEEEE----HHHHH-B-...SSTTS CS
  COesterase  83 ...............vsEDCLyLnvytPkekkeakkklPVlVwihGggfqtgsase.ydgsaLaaeg.....nvivVtinYRlGvlGFlst...gdeea 157
                                +sEDCL+L+v +P++  +++k+ PVl+wih gg+++g++++  ++ +L+a+      ++i V+inYRlG++G+ls     +++ 
  KHJ34312.1 136 ltietiytyqpldprTSEDCLFLDVLVPEDVFNSNKSAPVLIWIHAGGYVSGDKTSaGKPLNLLAKAeengeGIIFVAINYRLGLFGWLSGstfTSQHG 234
                 *******************************9999999***************9885555566555559999*****************98445669** PP

                 BS-HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSGGGT..TSBSEEEEES--TTSTTTSBSHHHHHHHHHHHHTTS-CSSHHHHH CS
  COesterase 158 pGNvGllDqvlALrWVkenIasFGGdpervtlfGesAGaasvsllllsplsr..glfkraIlqSGsalspwaiqkkarkrakklakkvgckassskelv 254
                 + N+Gl+Dq+lAL+WV++nI+ FGGd +rvt++GesAG+ s+  +++    +    f+raIlqS   ++p++ + ++ ++++ + +k++   s+  ++v
  KHJ34312.1 235 QPNAGLYDQRLALEWVQRNIHLFGGDNKRVTVIGESAGGGSIMHHITAWGLNdpPPFQRAILQSP-GYMPVVGDGQQGRTFDLVLSKAQSLISKNIKTV 332
                 **********************************************9955443679********6.89999999999999999999999999999999* PP

                 HHHHCS-HHHHHHCCGG.SSSSSSTTC-SSS-B--SSSSSS-HHHHHHCGC...CSEEEEEEETTTTHHHHCCHSTTTSSSSHHHHHHHHHHHHHHHHH CS
  COesterase 255 eclrsksaeelldaqek.aleasssklvsfaPvvdgdflpekPeellkseg...kvplliGvnkdegllflaylldkeksvkkkeeklsesllkdelyl 349
                   l+s + + l + ++  + +      ++f+Pvvdg+++p+ P +ll++     +  ++   n deg +f   +  ++    + +++++e         
  KHJ34312.1 333 ADLKSIHFTVLAALNNViVAQSAPHGTFTFGPVVDGKYVPKLPGTLLNEGRhaePLSVMAAHNLDEGYIFTLPYITDQ----RIDSNIEEIF-----PD 422
                 ********9999988887777888999**********************669999**************998666653....2222222222.....22 PP

                 HHCCHHHHHHHHHHHHS..TTTSSTCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTT-SEEEEEEE--STTSSSTTTGSSBTTTTHHHHTTGGGTSGC CS
  COesterase 350 eaekkeelseaikeeyt..deadrddaeksrkallelltdvlfkapvlrtaklhasrgspvYlYsfdyrnssskkpkwmgvvhgdeleyvfglplleke 446
                 +   +++++  ++++      ++++ +++  ++ + +++++ f + ++ ta +     ++ Y+Ysf  +             h+++++y f +    + 
  KHJ34312.1 423 A---SDAIKSHLINKIWpaIYNESSLYSNPPQRASLAISEIGFSCFSRYTALAF---PNSSYAYSFAVPP----------GFHSYDVPYTFFNGETGNV 505
                 2...23333333333322111455566666677777889999999999998888...6677*****8866..........89********998888777 PP

                 SS-HHHHHHHHHHHHHHHHHHHHSSTTSTTSS----B.TTTBE CS
  COesterase 447 eftkedeklsrkmmtywtnFaktgnPnkeeeekWpkytkeeek 489
                        +++++m +++tnFak+g+Pn+ + +++p+y + ++ 
  KHJ34312.1 506 -----NITVAETMQSLITNFAKHGDPNGPGVPNFPQYLPGSRM 543
                 .....679*****************************655444 PP

>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   4.1e-11   3.7e-07       1     112 [.     176     303 ..     176     343 .. 0.76

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 4.1e-11
                    EEEE--STTTS--TTTTHHHHHHHHHH....HTSEEEEEE---T...........TTS-TT.HHHHHHHHHHHHHHHTHHHHTETTCEEEEEEETH CS
  Abhydrolase_3   1 lvyfHGGGfvlgsldthdalcrelake....lgavvvsvdYrlA...........PehpfP.aavedalaalrwlaeqawelgadpsrivlaGdSa 80 
                    l+++H GG+v+g+ +++ + ++ lak+     g++ v+++Yrl             +h  P a + d   al+w++ + + +g d++r+++ G+Sa
     KHJ34312.1 176 LIWIHAGGYVSGDKTSAGKPLNLLAKAeengEGIIFVAINYRLGlfgwlsgstftSQHGQPnAGLYDQRLALEWVQRNIHLFGGDNKRVTVIGESA 271
                    689**************88888888762222589********963333333333368877735699************99**************** PP

                    HH.HHHHHHHHHHHHTT---EEEEEEESE-SST CS
  Abhydrolase_3  81 GG.nlaaavalrardegepkvagqvliyPvtdl 112
                    GG  ++++++ +  ++  p+ +  +l +P+ ++
     KHJ34312.1 272 GGgSIMHHITAWGLND-PPPFQRAILQSPGYMP 303
                    8625788777776665.6778889999996644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       321  (0.017904); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.21s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4359.59
//
Query:       KHJ34313.1  [L=436]
Description: putative imp-specific 5 -nucleotidase 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   8.1e-195  647.5   0.0   9.1e-195  647.3   0.0    1.0  1  ISN1      IMP-specific 5'-nucleotidase


Domain annotation for each model (and alignments):
>> ISN1  IMP-specific 5'-nucleotidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  647.3   0.0  5.1e-199  9.1e-195       1     411 []       1     424 [.       1     424 [. 0.99

  Alignments for each domain:
  == domain 1  score: 647.3 bits;  conditional E-value: 5.1e-199
        ISN1   1 mtsryrveyalkshrrdefiewikgllavpfvlhsqseavaeeeekseakvaeevkrryaeilkdvekliddkielqkekkkekskLklLvPsigkfft 99 
                 mt+ryrveyalkshrrd+fiewikgllavpfvl+sq++ v+e+++ s++k+aee++rry ei+kdve++idd+ie+qk   + +skLklLvPsig  ft
  KHJ34313.1   1 MTTRYRVEYALKSHRRDQFIEWIKGLLAVPFVLYSQPTGVFETRNYSVQKMAEEAHRRYVEIMKDVEEMIDDHIEHQKVGLEGQSKLKLLVPSIGIIFT 99 
                 9************************************************************************************************** PP

        ISN1 100 kLpleeaflvedkkraissrrlvaPsfnDvrlilntaqilaltkakklklvtfDGDvtlydDGksleednpvikrllkllkkdvkvgivtaaGyteaek 198
                 +Lpl++af ++d+kr+issrr+v PsfnDvrlilntaq++ +t+  kl+l+tfDGDvtlydDGk+le++npvi+r++ ll++++kvgivtaaGyteae+
  KHJ34313.1 100 RLPLADAFRYQDRKRFISSRRFVPPSFNDVRLILNTAQLMGVTTYGKLELATFDGDVTLYDDGKALEPTNPVIERIVYLLSRGTKVGIVTAAGYTEAER 198
                 *************************************************************************************************** PP

        ISN1 199 yeerlkGLldalkaseelteeqkenllvmGgesnylfryseeskellklvereeWllpemkaWseedikalldvaekalrelakklklpatilrkerav 297
                 y++rl+GLl+a+k+s+ l++eqk++l++mGgesnyl+rys+es+ ll++++r++W+l++m+ W++++i+alld+ae+++re++++l+l+atilrkerav
  KHJ34313.1 199 YYHRLHGLLEAVKSSSVLNPEQKQSLIIMGGESNYLLRYSSESPFLLTHLPRRSWILSDMSMWTQSSITALLDLAESSFRECVANLSLEATILRKERAV 297
                 *************************************************************************************************** PP

        ISN1 298 GivpsekevklareqLeevvlvvqkklelseaareikfcafnGGsDvfvDiGdkslGvevlqkyfgkeekae.............ikkeetlhvGDqfl 383
                 Gi+ps +++k+ re+Lee+ lvvqkkle+s++++ ++fcafnGG+DvfvDiGdks+Gv v+q++fg  +++              i+ ++tlhvGDqfl
  KHJ34313.1 298 GIIPSVPNYKFPRESLEETALVVQKKLEMSDVGKVLPFCAFNGGNDVFVDIGDKSWGVLVCQNFFGMVNNTPpndqknddcirekIEARSTLHVGDQFL 396
                 ******************************************************************98876688999********************** PP

        ISN1 384 saganDfkarlaattvWiasPaetvell 411
                 sag+nDf+ar++att+WiasPaet+ell
  KHJ34313.1 397 SAGSNDFRARAVATTAWIASPAETIELL 424
                 *************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       447  (0.0249317); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3361.55
//
Query:       KHJ34314.1  [L=167]
Description: hypothetical protein EV44_g3764 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0058   15.5   0.0     0.0071   15.3   0.0    1.1  1  Usher     Outer membrane usher protein
  ------ inclusion threshold ------
      0.039   14.1   0.0      0.072   13.2   0.0    1.4  1  MLVIN_C   Murine leukemia virus (MLV) integrase (IN) C-termin


Domain annotation for each model (and alignments):
>> Usher  Outer membrane usher protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   7.9e-07    0.0071     420     474 ..      46     100 ..      25     106 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 7.9e-07
                 EEESTSS-EEEEEEEETSSEEEEEEEEEESSEEEEEEEEEEEEEEETTEEEEES- CS
       Usher 420 lssdgkeslsanlsyqasygevslsysysrdysqlnlslsGgvvahakGvtlsqe 474
                  +++++++l  +++yq++ g++ + y ++++ ++l ++++G ++++ +G  ++++
  KHJ34314.1  46 DKTSQRHDLGIKANYQFNPGNMVMLYDHKESGKKLRATWRGPFIITGYGGDMHRS 100
                 45566777999*****************************************987 PP

>> MLVIN_C  Murine leukemia virus (MLV) integrase (IN) C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   8.1e-06     0.072       2      30 ..      60      90 ..      59      92 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 8.1e-06
                XXXXTTEEEEEEE--S..SSS--EEEEEEEE CS
     MLVIN_C  2 hkyrpGdwvyvrrhrq..kkLePrWkgpyvv 30
                ++++pG++v++  h++  kkL   W+gp+++
  KHJ34314.1 60 YQFNPGNMVMLYDHKEsgKKLRATWRGPFII 90
                5899*****99999875589*********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (167 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.43
# Mc/sec: 1174.20
//
Query:       KHJ34315.1  [L=864]
Description: putative vacuolar atp synthase 98 kda subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
          0 1064.0   0.2          0 1063.9   0.2    1.0  1  V_ATPase_I       V-type ATPase 116kDa subunit family
  ------ inclusion threshold ------
       0.02   14.6   0.1      0.059   13.0   0.1    1.7  1  DUF4988          Domain of unknown function
       0.09   12.8   0.7       0.36   10.9   0.7    2.0  1  THP2             Tho complex subunit THP2
       0.19   12.4   3.5        4.9    7.8   0.1    3.4  3  DUF5344          Family of unknown function (DUF5344)
       0.25   11.4   1.4          2    8.4   0.1    2.4  2  Tnp_22_trimer    L1 transposable element trimerization domain
       0.39   10.6   2.5       0.23   11.4   0.2    1.8  2  Ax_dynein_light  Axonemal dynein light chain
        0.7   10.0   3.2        1.9    8.7   0.4    2.4  2  bZIP_1           bZIP transcription factor
        1.1    9.6   4.1        3.6    8.0   0.0    3.0  3  BLOC1_2          Biogenesis of lysosome-related organelles co
        1.2    8.7   5.3       0.41   10.2   0.6    2.1  2  Filament         Intermediate filament protein
        1.6    7.5   5.5        8.7    5.1   0.4    2.2  2  Spc7             Spc7 kinetochore protein


Domain annotation for each model (and alignments):
>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ! 1063.9   0.2         0         0       2     813 .]      31     850 ..      30     850 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1063.9 bits;  conditional E-value: 0
  V_ATPase_I   2 eLGelglvqfrDlnedvnafqrkfvkevrrcdemerklrfleeeieklekavikeeeaeesleapeekeldeleeelekleeelkelnenleklkkeln 100
                 +LGe+++vqfrDln+ v+afqr+f++e+rr+d++er+lr ++++i +    ++k + ++e+ + p+++e+d l++++++le+++++ln+++e+lkk+  
  KHJ34315.1  31 ALGEISQVQFRDLNSTVSAFQRTFTQEIRRLDNVERQLRNFHTQIVNSGIPIRKVDLETENFDVPTASEIDALTDRCQSLEKRINSLNDSYETLKKREI 129
                 79*********************************************77777777777999************************************** PP

  V_ATPase_I 101 elvelkavlekakefleee.eeeeeeeeseeeeee....keeeeeeeseeeeeeelleeeeelsfvaGvikrekveaferilwralrgnlflrqaeiee 194
                 el+e++ vl++a  f++++  + +e +es++++++    + e++e+ ++++e++e + + ++++fvaGv++r++v+aferilwr+lrgnl+++qaei+e
  KHJ34315.1 130 ELIEWRCVLREAGGFFDRAyGNVDEIRESNDNDDApllqDLEQNEQGITTNEDAERSFSIMNIRFVAGVVPRHRVAAFERILWRTLRGNLYMNQAEIPE 228
                 *****************99644444444433333345422222223333333333333344499*********************************** PP

  V_ATPase_I 195 pledpetgekveksvfiiffqgeqlkekikkicesfgaklyelpeseeereeklkeveeriedlekvleqteealkevleeiakeleewklkvkkekai 293
                 pl+dp++++ ++k+vf+if++g+++ +ki+ki es+ga+ly+++e++e r+e++ ev+++i+dl +vl +te++l+++l++++++l++w++++kkeka+
  KHJ34315.1 229 PLIDPSNNKVTQKNVFVIFAHGQEIIAKIRKISESLGADLYNVDENSELRREQVLEVNAQISDLASVLGNTEKTLRAELNQLSQSLASWMIVIKKEKAV 327
                 *************************************************************************************************** PP

  V_ATPase_I 294 yhtLnlfnldvtkkvliaegWvpkeeleeiqkalkeateessssvpsilneietketpPTyfrtnkfteafQeivdaYGiarYrEvNpalftiitFPFl 392
                 y+tLn+f++d+++k+liae+W+p+++l  i+ +l++++++++  vpsi+nei+t++tpPTy +tnkfte+fQ+i++aYG+a+Y+EvNp+l tiitFPFl
  KHJ34315.1 328 YQTLNMFSYDHARKTLIAEAWCPTNSLPLIKATLQDVNSRAGLLVPSIVNEIRTNKTPPTYQKTNKFTEGFQTIINAYGTAKYQEVNPGLPTIITFPFL 426
                 *************************************************************************************************** PP

  V_ATPase_I 393 FavMFGDiGHGlllllfalllvlkekklkkkkkdeilemlfsgRYiillmGlfsiYtGliYNdifskslnlfgSswevkeka..veeeelkkekkeekv 489
                 FavMFGD+GHG++++++a++++++ek lkk  +de+++m++ gRYi+l+mG+fs+YtGliYNdifsksl++f S+we++  +  +e ++l+++ k +  
  KHJ34315.1 427 FAVMFGDMGHGFIMFCAATAMIYWEKPLKKV-RDELFSMAYYGRYIMLMMGIFSMYTGLIYNDIFSKSLTIFPSAWEWDVPKgwQEGQTLEAKLKGDYR 524
                 ****************************997.8*********************************************6544535667777999999** PP

  V_ATPase_I 490 YpfGlDpaWklaenellflnSlKmKlsvilGviqMlfgvllslvNalyfkkkldiilefiPqllfllsifgYlvlliiyKWlvdweaekekapsllntl 588
                 +pfGlD++W+++en+llf nS+KmKls+++G+++M+++++ls++Na++fk+ +d++  f+P+++f+++ifgYlv++ii+KW++dw a  +++p+lln+l
  KHJ34315.1 525 FPFGLDWMWHGTENDLLFANSFKMKLSILMGWFHMTYSLCLSYINARHFKSPIDVWGVFVPGMIFFQAIFGYLVFTIIFKWCIDWYAIGQSPPGLLNML 623
                 **************************************************************************************87777******** PP

  V_ATPase_I 589 inmflskgkvkeeelyegqetvqvvLlllalvcvpvlllvkPlilklkhkkkkkkkekkkeeeee....eeeeeeeeeeeeeeeaeeeeeeeeeeeeee 683
                 i+mfls+g+v +e+ly gq+ vq++L+l+a+v+vp+ll++kP++l+++++++++k+++  +e ++    e+++e+++++ + +++ +++ ee +  ++ 
  KHJ34315.1 624 IYMFLSPGTV-DEPLYGGQAGVQIFLVLIAVVQVPILLFLKPFYLRWENNRARSKGYRGISEFSRvsalEDDDENDSATLDGRNSLASDGEEVSLIRQG 721
                 **********.99********************************************999988844444333333333333333444444555555666 PP

  V_ATPase_I 684 eeeeeeeeeeeefdfgevfihqvIhtIEfvLgciSnTASYLRLWALSLAHaqLseVlwemvlkkallksksvlgvillvilfavfavltvavLllmegl 782
                 ++++++++e+eef+fgev+ihq+IhtIEf+L+c+S+TASYLRLWALSLAH+qLs Vlw+m+l+  +l s++++gv++lv++f+v+++l++avL++meg+
  KHJ34315.1 722 NNNNDDDDEHEEFEFGEVMIHQIIHTIEFCLNCVSHTASYLRLWALSLAHQQLSVVLWNMTLAI-GLGSTGTIGVFILVVTFFVWFFLSIAVLVVMEGT 819
                 777888899******************************************************9.8899****************************** PP

  V_ATPase_I 783 safLHaLRLhWVEfqsKFykgdGykFepfsf 813
                 sa+LH+LRLhWVE++sK++ gdG++Fe++sf
  KHJ34315.1 820 SAMLHSLRLHWVEAMSKHFMGDGTPFEALSF 850
                 ****************************998 PP

>> DUF4988  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   3.3e-05     0.059       3      31 ..      98     126 ..      97     131 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.3e-05
     DUF4988   3 ddvndlkdrvaaleeqvkelndniealkk 31 
                 +++++l dr ++le+++++lnd+ e+lkk
  KHJ34315.1  98 SEIDALTDRCQSLEKRINSLNDSYETLKK 126
                 589**********************9985 PP

>> THP2  Tho complex subunit THP2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.7    0.0002      0.36       9      88 ..     263     342 ..     254     348 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.0002
        THP2   9 rlsvdLakqveisdeevseivvddekppkelqeilekyee.esedaeelraklekYldeiKmerakytleNkyllkdklke 88 
                  l  dL +  e+s+ +  e v++ +++ ++l+++l + e+  +++ ++l + l +++  iK e+a y+  N ++  +  k+
  KHJ34315.1 263 SLGADLYNVDENSELR-REQVLEVNAQISDLASVLGNTEKtLRAELNQLSQSLASWMIVIKKEKAVYQTLNMFSYDHARKT 342
                 4555555444444444.468889999999******9998857899***********************9999987766555 PP

>> DUF5344  Family of unknown function (DUF5344)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.066   1.2e+02      41      67 ..     103     129 ..      87     133 .. 0.84
   2 ?   -1.7   0.2       2.5   4.5e+03      52      79 ..     285     312 ..     280     316 .. 0.77
   3 ?    7.8   0.1    0.0027       4.9      12      62 ..     358     408 ..     356     414 .. 0.92

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.066
     DUF5344  41 vvekineleeeleellkaYktlllknv 67 
                  ++++++le+ +++l ++Y+tl +  +
  KHJ34315.1 103 LTDRCQSLEKRINSLNDSYETLKKREI 129
                 578999*************99977665 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 2.5
     DUF5344  52 leellkaYktlllknvedtesaVdslke 79 
                  ++++++++++l + +++ +  +++l++
  KHJ34315.1 285 VNAQISDLASVLGNTEKTLRAELNQLSQ 312
                 5677888888888888888888887765 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0027
     DUF5344  12 eqkLselktaaeelktsipetisgknsldvvekineleeeleellkaYktl 62 
                 +  L+++++ a  l +si ++i  +++  + +k n++ e ++++++aY t+
  KHJ34315.1 358 KATLQDVNSRAGLLVPSIVNEIRTNKTPPTYQKTNKFTEGFQTIINAYGTA 408
                 66899999***999**********************************886 PP

>> Tnp_22_trimer  L1 transposable element trimerization domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.1    0.0011         2       1      21 [.     106     126 ..     106     130 .. 0.92
   2 ?    1.2   0.1       0.2   3.6e+02       8      18 ..     687     697 ..     685     701 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0011
                    HHHHHHHHHHHHHHHHHHHHH CS
  Tnp_22_trimer   1 RidelEERvSaaEDeieeidr 21 
                    R++ lE R+    D+ e +++
     KHJ34315.1 106 RCQSLEKRINSLNDSYETLKK 126
                    9***************99985 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.2
                    HHHHHHHHHHH CS
  Tnp_22_trimer   8 RvSaaEDeiee 18 
                    RvSa ED+ e+
     KHJ34315.1 687 RVSALEDDDEN 697
                    9******8766 PP

>> Ax_dynein_light  Axonemal dynein light chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   0.00013      0.23      96     158 ..      69     130 ..      46     135 .. 0.82
   2 ?   -3.0   0.2       3.4   6.1e+03     131     149 ..     296     314 ..     271     332 .. 0.50

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00013
  Ax_dynein_light  96 iaayktlyessvaFgmrka.lqaeqgkselekkikeLeeekeelekqvaelkaklealekreke 158
                       + + ++++s +   +rk  l++e+    + ++i +L++++++lek++++l+  +e+l+kre e
       KHJ34315.1  69 RNFHTQIVNSGI--PIRKVdLETENFDVPTASEIDALTDRCQSLEKRINSLNDSYETLKKREIE 130
                      455566666666..67775379999999999******************************987 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.4
  Ax_dynein_light 131 Leeekeelekqvaelkakl 149
                      L +++++l+ ++++l + l
       KHJ34315.1 296 LGNTEKTLRAELNQLSQSL 314
                      3333344444444443333 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.4     0.001       1.9      27      54 ..      99     126 ..      97     131 .. 0.56
   2 ?    1.2   0.2      0.23   4.1e+02      30      55 ..     288     313 ..     277     317 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.001
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  27 eieeLerrvkaLekeNksLkseleelkk 54 
                 ei++L++r++ Lek   sL +  e+lkk
  KHJ34315.1  99 EIDALTDRCQSLEKRINSLNDSYETLKK 126
                 4555555555555555555555555555 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.23
                 HHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  30 eLerrvkaLekeNksLkseleelkke 55 
                 + ++ +++L +  k+L+ el++l+  
  KHJ34315.1 288 QISDLASVLGNTEKTLRAELNQLSQS 313
                 6677789999999*********9876 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.7   3.1e+03      57      77 ..      51      71 ..      20      77 .. 0.65
   2 ?    8.0   0.0     0.002       3.6      32      62 ..      96     126 ..      87     134 .. 0.85
   3 ?    1.1   0.4      0.27   4.8e+02       6      61 ..     259     315 ..     254     324 .. 0.64

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.7
     BLOC1_2 57 yeelqpylqqidqiekqvteL 77
                + ++ + ++++d++e+q++ +
  KHJ34315.1 51 QRTFTQEIRRLDNVERQLRNF 71
                336666667777777776665 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.002
     BLOC1_2  32 asekykklkdvaaslekkleklnekyeelqp 62 
                 +++++++l+d+++slek ++ ln  ye+l++
  KHJ34315.1  96 TASEIDALTDRCQSLEKRINSLNDSYETLKK 126
                 6889999*******************99986 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.27
     BLOC1_2   6 kvskyleaeleatvedyklLeklNeaasekykklkdvaaslekkle.klnekyeelq 61 
                 k+s+ l a+l  + e+ +l  +   ++++++ +l++v+ ++ek+l  +ln+++++l+
  KHJ34315.1 259 KISESLGADLYNVDENSELRREQVLEVNAQISDLASVLGNTEKTLRaELNQLSQSLA 315
                 666666666666666666666677777777777777777777666325666666665 PP

>> Filament  Intermediate filament protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.6   0.00023      0.41      74     139 ..      37     127 ..      23     187 .. 0.91
   2 ?    0.1   0.4      0.27   4.9e+02     219     277 ..     255     313 ..     237     331 .. 0.59

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00023
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.........................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    Filament  74 qleldnlreeledlrkkyekelnkreevEaelkalr.........................kdldeatlarvdLekkvesLkeelaflkkv 139
                 q++ ++l+ ++  ++  + +e+++ ++vE++l+++                           ++d++t +   Lek+++sL++  + lkk 
  KHJ34315.1  37 QVQFRDLNSTVSAFQRTFTQEIRRLDNVERQLRNFHtqivnsgipirkvdletenfdvptaSEIDALTDRCQSLEKRINSLNDSYETLKKR 127
                 7899999*****************************99***************99999999999999999999999999999999999985 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.27
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Filament 219 telrrqiqsleieleslkkqkasleaqlaeleerleaeleklqeklseleeelaeiree 277
                 +++r+  +sl ++l ++ ++++  ++q+ e++++++  ++ l ++ + l +el+++ + 
  KHJ34315.1 255 AKIRKISESLGADLYNVDENSELRREQVLEVNAQISDLASVLGNTEKTLRAELNQLSQS 313
                 44455555555555555555555555555555555544444444444444444444443 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.4    0.0048       8.7     207     281 ..      39     113 ..      22     131 .. 0.82
   2 ?    4.6   0.6    0.0071        13     215     275 ..     254     314 ..     246     333 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0048
        Spc7 207 elaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwsesevsrlkeevkaleel 281
                 ++++l+++++++++  ++  ++l+++e ++ + ++q+ +    i++ +  +e+    ++se+++l+++ ++le+ 
  KHJ34315.1  39 QFRDLNSTVSAFQRTFTQEIRRLDNVERQLRNFHTQIVNSGIPIRKVDLETENFDVPTASEIDALTDRCQSLEKR 113
                 677888888888888888888889999999998888888888888888888888899999999999999888875 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.0071
        Spc7 215 ieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwsesevsrlkeev 275
                 i++ +k  ++l ++l +++e+ e  +eq  e++++i+   +vl ++++  + e+++l +++
  KHJ34315.1 254 IAKIRKISESLGADLYNVDENSELRREQVLEVNAQISDLASVLGNTEKTLRAELNQLSQSL 314
                 3334444455667777777777777788888888888888888877777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (864 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1051  (0.0586201); expected 358.6 (0.02)
Passed bias filter:                      585  (0.0326287); expected 358.6 (0.02)
Passed Vit filter:                        81  (0.00451782); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.79u 0.30s 00:00:01.09 Elapsed: 00:00:00.49
# Mc/sec: 5326.49
//
Query:       KHJ34316.1  [L=319]
Description: hypothetical protein EV44_g4291 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2441.34
//
Query:       KHJ34317.1  [L=399]
Description: putative zinc finger c2h2 lyar-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.1e-14   51.1   3.7    9.1e-14   51.1   3.7    2.1  2  zf-LYAR   LYAR-type C2HC zinc finger
  ------ inclusion threshold ------
      0.041   13.9   2.8       0.17   12.0   0.4    2.7  2  zf-ACC    Acetyl-coA carboxylase zinc finger domain
       0.05   13.2   0.2         11    5.7   0.0    2.4  2  zf_UBZ    Ubiquitin-Binding Zinc Finger


Domain annotation for each model (and alignments):
>> zf-LYAR  LYAR-type C2HC zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.2      0.45   2.7e+03       1      18 [.       4      21 ..       4      26 .. 0.77
   2 !   51.1   3.7   1.5e-17   9.1e-14       1      28 []      30      57 ..      30      57 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.45
     zf-LYAR  1 fsCiDCsktFdgdeykaH 18
                fsC  C+ +  ++  +aH
  KHJ34317.1  4 FSCEACGDVLLKKKLDAH 21
                899999988888888888 PP

  == domain 2  score: 51.1 bits;  conditional E-value: 1.5e-17
     zf-LYAR  1 fsCiDCsktFdgdeykaHtsCItEaeKY 28
                ++C+DC+++F++++y+aHtsCI+E++KY
  KHJ34317.1 30 YTCLDCMTNFENNDYRAHTSCISEQQKY 57
                8*************************** PP

>> zf-ACC  Acetyl-coA carboxylase zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.4   2.8e-05      0.17       3      19 ..       5      21 ..       4      27 .. 0.89
   2 ?    1.2   0.1     0.068   4.1e+02       9      22 ..     374     387 ..     373     387 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.8e-05
      zf-ACC  3 KCpsCgemlykkeLern 19
                 C++Cg +l+kk L+++
  KHJ34317.1  5 SCEACGDVLLKKKLDAH 21
                6*************988 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.068
      zf-ACC   9 emlykkeLernlyV 22 
                  ++  keL +nl V
  KHJ34317.1 374 KVTNEKELLKNLRV 387
                 67889*******98 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0    0.0025        15       2      20 ..       3      21 ..       2      22 .. 0.91
   2 ?    5.7   0.0    0.0018        11       2      20 ..      29      47 ..      28      48 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0025
      zf_UBZ  2 tylCerCgkeipeselqEH 20
                ++ Ce Cg  ++  +l+ H
  KHJ34317.1  3 SFSCEACGDVLLKKKLDAH 21
                699********99999999 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0018
      zf_UBZ  2 tylCerCgkeipeselqEH 20
                +y+C +C ++++ ++   H
  KHJ34317.1 29 SYTCLDCMTNFENNDYRAH 47
                7**********99998888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       700  (0.0390429); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.17s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 3407.59
//
Query:       KHJ34318.1  [L=380]
Description: putative survival factor 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-58  197.7   0.0      2e-58  196.8   0.0    1.4  1  Svf1_C    Svf1-like C-terminal lipocalin-like domain
      1e-57  194.8   0.3    1.4e-57  194.4   0.3    1.2  1  Svf1      Svf1-like N-terminal lipocalin domain


Domain annotation for each model (and alignments):
>> Svf1_C  Svf1-like C-terminal lipocalin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  196.8   0.0   2.3e-62     2e-58       1     165 []     217     379 ..     217     379 .. 0.98

  Alignments for each domain:
  == domain 1  score: 196.8 bits;  conditional E-value: 2.3e-62
      Svf1_C   1 mkpnhaAksWnflnFqsekvsavlmeFttpksygntkvsigiivkddkilavtvdnkvehleaklDeetgwkvPksiklelkgkksevkdeeveaklea 99 
                 mkp+haA++Wnf+nFq ++ sa+lmeFttpk+yg+t v++g ++++d+il++ ++n++++  a+ D+e+gw++P+sik e+ gk+++ k  +v+a +e+
  KHJ34318.1 217 MKPHHAAARWNFVNFQGPNISAILMEFTTPKAYGTTAVNVGGLIQNDTILIANSSNSIQYGMANRDQENGWPIPQSIKAEWIGKSKDCK--DVHAIIEG 313
                 9*************************************************************************************888..9******* PP

      Svf1_C 100 dleelvervDvlaeiPqfvkkivsgvagtkPYiYqyl.nkkelklkvedeeevkekGllfaEatfis 165
                 +lee+++r+Dv+ae+P fvk+iv+g++gt+PYiYqy  ++++l++k++d++ ++ekG+lf+Eatfis
  KHJ34318.1 314 SLEERIDRIDVMAEVPGFVKQIVAGAVGTRPYIYQYGvDSVSLDIKIGDTT-LTEKGYLFTEATFIS 379
                 ************************************7699*********97.99************8 PP

>> Svf1  Svf1-like N-terminal lipocalin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.4   0.3   1.5e-61   1.4e-57       1     164 []      55     215 ..      55     215 .. 0.98

  Alignments for each domain:
  == domain 1  score: 194.4 bits;  conditional E-value: 1.5e-61
        Svf1   1 vEtqtfYftdldggivgfvQiiySnviGlyktaqftfkifdskekkeknlWkstklenfei..dkasfyadnlsielkneegeqykikssvnkelkvdl 97 
                 vEtqtfY+ +++g +vg+vQ+i+Sn++G++kt qf++kif +k++++ +lW++ +l+n+e+  dk +fya+++++e+ +e+g+qy+iks++n ++ v+l
  KHJ34318.1  55 VETQTFYLHADSG-HVGMVQVIHSNIAGIRKTSQFNTKIFYPKSQSKPHLWSTDQLSNVEFshDKLNFYANDCAVEM-SEDGKQYTIKSMTNSNSLVNL 151
                 8*******99998.******************************9999************999**************.99******************* PP

        Svf1  98 tvtrlapGfklgedgttyfgddieepwgsmrHvfwPrnkveGtivlkkedkkieftgelglfvdAlq 164
                  ++++apGf++g+dg+t++g++ ++pwg++rH+fwPrn++eGti+++  d +i+f+g+ +lfv Alq
  KHJ34318.1 152 RISQVAPGFQIGRDGKTLYGTNSKKPWGCIRHAFWPRNNAEGTIITN--DGSIDFKGR-CLFVYALQ 215
                 **********************************************9..99******5.*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2880.30
//
Query:       KHJ34319.1  [L=159]
Description: hypothetical protein EV44_g6252 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       979  (0.0546043); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1231.49
//
Query:       KHJ34320.1  [L=1576]
Description: hypothetical protein EV44_g2978 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-31  109.7   3.6    3.3e-31  108.9   0.2    2.5  2  RhoGEF        RhoGEF domain
    1.9e-05   24.4   1.5    2.3e-05   24.2   0.3    1.7  2  BAR           BAR domain


Domain annotation for each model (and alignments):
>> RhoGEF  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.9   0.2   3.7e-35   3.3e-31       2     182 .]     860    1077 ..     859    1077 .. 0.91
   2 ?    0.9   0.3     0.051   4.6e+02      12      65 ..    1152    1239 ..    1149    1336 .. 0.69

  Alignments for each domain:
  == domain 1  score: 108.9 bits;  conditional E-value: 3.7e-35
                  HHHHHHHHHHHHHHHHHHHHHTHCCCHHCTCCHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHH.................................. CS
      RhoGEF    2 ikElleTErsYvrdLkvlvevylkplselevlseeeikiiFsnieeilelhrsflleeLeerl.................................. 64  
                  ikEl++TE+ Y +d++v+ e+y  +++   +l+ ++ikiiF n eei++++ + +le+L+                                     
  KHJ34320.1  860 IKELIDTEAVYFKDMNVVEEIYKGTAEACPNLDTSDIKIIFRNTEEIVSFS-NTILEDLKLAAlpiysprapkaktngshkstsssdpdkisietvm 955 
                  9**********************98887779********************.8899989888899**************999999998888777666 PP

                  ...HHHTTSS-S-SHHHHHHHHSTHHH.HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHTS..GGGTT--HHHHTTHHHHHHHHHHHHHHHHHHT CS
      RhoGEF   65 ..keseeqkeaqsigdvflkfadkfkk.YseYcsnypnalkllkelskknkkfkafleeaeer..pecskldLeslLikPvqRlprYpLLLkellkn 156 
                    +++e++++++ ig  f k++++++  Y+++++n ++a ++l  l +k++ ++ +l e++    + +   dL+ lL+kPvqR++rY+LLLk++   
  KHJ34320.1  956 idETEEQRDRETFIGANFGKHLPNMQLiYTNFLKNSESASSRLLDL-QKDPAVRVWLSECNTVakDLTAAWDLDALLVKPVQRITRYQLLLKQIQTT 1051
                  5537789999999***********9967***************995.5***********99752145599*************************** PP

                  S-TTSHHHHHHHHHHHHHHHHHHHHH CS
      RhoGEF  157 tpeshpdyealkkaleaikevaseiN 182 
                  tp +hpd eal  + ++i+++++ i+
  KHJ34320.1 1052 TPYNHPDSEALIACCQEISKLLKDID 1077
                  *********************99885 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.051
                  HHHHHHHHHHHTHCCCHHCT....................CCHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHH................. CS
      RhoGEF   12 YvrdLkvlvevylkplsele....................vlseeeikiiFsnieeilelhrsflleeLeerl................k 65  
                  Y r+ ++ v+ yl++ls  e                    ++s  ei + F + e+i+e+  +f++e +e+++                k
  KHJ34320.1 1152 YTRQVSIYVNDYLRFLSAIElimrmspagypeieskwarfNVSMREIGTNFVE-EHIFEVR-KFVIEPFEKMIsayngpllamkkrdkrK 1239
                  77777777888887777666777777777888888888888889999999988.9999999.8888888888866655555444333330 PP

>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.1      0.76   6.8e+03     144     171 ..    1068    1095 ..    1050    1107 .. 0.69
   2 !   24.2   0.3   2.5e-09   2.3e-05     111     219 ..    1202    1299 ..    1187    1313 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 0.76
         BAR  144 klehkrlDyDaakarlkklktkkskkak 171 
                    ++++ D+D+ k+r+  + +   +k+k
  KHJ34320.1 1068 EISKLLKDIDDLKKRIHMVAKIVGRKRK 1095
                  4556677888888887766655555554 PP

  == domain 2  score: 24.2 bits;  conditional E-value: 2.5e-09
         BAR  111 teeelekrvetnfldplrellekefkeiqkerkklehkrlDyDaakarlkklktkkskkakdeekaeeelrkAqqkfeesneelkaeLpnllaleve 207 
                  + ee+  +v++ +++p+++++ + +     ++kk++++++D+D++ +   + k           k +e+l++ ++++  + e+lk eLp+l++l  +
  KHJ34320.1 1202 FVEEHIFEVRKFVIEPFEKMI-SAYNGPLLAMKKRDKRKIDFDKHLSLKAQGK-----------KVDEKLQNLSNEYSALHEILKFELPKLSQLTEK 1286
                  5577788999***********.*********************9987544433...........469**************************9999 PP

         BAR  208 fv.nqlqafveaq 219 
                       l++++++q
  KHJ34320.1 1287 MGkVILERLIYIQ 1299
                  9888888888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1576 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       891  (0.049696); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.89u 0.28s 00:00:01.17 Elapsed: 00:00:00.46
# Mc/sec: 10350.89
//
Query:       KHJ34321.1  [L=324]
Description: putative plc-like phosphodiesterase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-07   29.5   0.0    7.9e-07   28.8   0.0    1.3  1  PI-PLC-X  Phosphatidylinositol-specific phospholipase C, X do


Domain annotation for each model (and alignments):
>> PI-PLC-X  Phosphatidylinositol-specific phospholipase C, X domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.0   4.4e-11   7.9e-07      27     144 ..      41     163 ..      36     164 .. 0.90

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 4.4e-11
                 --SS-HHHHHHTT--EEEEEE-....TT.SEEEETTEEE..EEEHHHHHHHHHHHHHHSTT--EEEEEEETTT-THHHHHHHHHHHHGGGGB-EEETT- CS
    PI-PLC-X  27 ssveayrnaLlrGcRcvEidvw.dgedeepvvlhgytlt.kkikfrdvleaikdyafktselPvivsLevhcsaeqqekmaeilkeifgdlLleeplek 123
                 ++   ++++L++G+R+++++   d ++ ++v  h + l  ++ +++dvl a  + ++   ++ ++vsL+ + s+   ++    ++++  d L +   +k
  KHJ34321.1  41 CQEIPLISMLEQGIRVFDLRFAfDVTKTRLVFWHAQALQsQTATVSDVLFAFSKWLDYHPSEAILVSLKYEKSTTLFARYNMNIQKAIYDALTTLVAQK 139
                 56667899************9879999999999*9999845679********************************99999999888888888888888 PP

                 ....------BCCCCTT-EEEEE. CS
    PI-PLC-X 124 ...eeskelpspeelkgKilikvk 144
                    ++++el ++ + +gKi++ ++
  KHJ34321.1 140 yflSAKNELGTLGDARGKIVLLRR 163
                 8889****************9775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2394.89
//
Query:       KHJ34322.1  [L=173]
Description: putative histone h4 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.6e-06   26.1   0.0    1.6e-05   25.1   0.0    1.6  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
    4.3e-05   23.6   0.1    0.00032   20.8   0.0    2.2  2  CENP-T_C       Centromere kinetochore component CENP-T histon
  ------ inclusion threshold ------
      0.045   13.5   0.3        0.8    9.5   0.0    2.7  3  SpoVS          Stage V sporulation protein S (SpoVS)
       0.06   13.7   1.6       0.17   12.3   1.6    1.9  1  Histone        Core histone H2A/H2B/H3/H4
      0.088   12.8   0.4       0.19   11.8   0.1    1.7  2  TFIID-18kDa    Transcription initiation factor IID, 18kD subu
      0.089   12.8   0.0       0.16   12.0   0.0    1.3  1  Diphtheria_T   Diphtheria toxin, T domain
       0.11   12.5   0.0        0.2   11.7   0.0    1.4  1  Bromo_TP       Bromodomain associated


Domain annotation for each model (and alignments):
>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   6.2e-09   1.6e-05       7      64 ..      93     149 ..      87     150 .. 0.93

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 6.2e-09
                    HHHHHHHCCTTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF   7 rvkkImksdpdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklA 64 
                     ++++ +   ++++i+ +  + i ++++ ++e +++e++++++ ++rKt++  ++  +
     KHJ34322.1  93 DIRRLARRG-GVKRISGSIYDEIRKSMKSYLENVLKETCDVVEFAQRKTVSVTDVIFV 149
                    688999999.9*******************************************9876 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.47   1.2e+03      88     104 ..       7      23 ..       3      41 .. 0.76
   2 !   20.8   0.0   1.2e-07   0.00032      21      77 ..      98     153 ..      84     163 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.47
    CENP-T_C  88 slaqryLPrEllqelrm 104
                 s+aq+ +P+ ++++ r+
  KHJ34322.1   7 SMAQKTIPKKVANDTRT 23 
                 67888888877766554 PP

  == domain 2  score: 20.8 bits;  conditional E-value: 1.2e-07
    CENP-T_C  21 akasgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkrq 77 
                 a+ +g  ++++ + ++ + k+ + ++e v ++     + a RKt+  +Dvi  ++r 
  KHJ34322.1  98 AR-RGGVKRISGSIYDEIRKSMKSYLENVLKETCDVVEFAQRKTVSVTDVIFVLRRI 153
                 33.356679**********************************************95 PP

>> SpoVS  Stage V sporulation protein S (SpoVS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.21   5.4e+02       6      28 ..       9      31 ..       3      35 .. 0.85
   2 ?    9.5   0.0   0.00031       0.8      36      56 ..      57      77 ..      38      91 .. 0.86
   3 ?   -0.7   0.0      0.47   1.2e+03      11      29 ..     103     121 ..      94     125 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.21
                -TT--HHHHHHHHHHHHHHTSEE CS
       SpoVS  6 ssksnpnkvagAiagvlrekgkv 28
                ++k+ p+kva+     lr+ gkv
  KHJ34322.1  9 AQKTIPKKVANDTRTSLRNAGKV 31
                57899999999999999988887 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00031
                HHHHHHHHHHHHHHHHHGGGT CS
       SpoVS 36 gAvnqavkAiaiargflapeg 56
                +++nq++k+i ++r+f+ ++ 
  KHJ34322.1 57 KSINQTIKGIGVTRNFIGTKR 77
                689*************98765 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.47
                 HHHHHHHHHHHHHHTSEEE CS
       SpoVS  11 pnkvagAiagvlrekgkve 29 
                 ++ ++g+i   +r+++k  
  KHJ34322.1 103 VKRISGSIYDEIRKSMKSY 121
                 788999***9999998755 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   1.6   6.5e-05      0.17      76     129 ..      96     151 ..       2     153 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6.5e-05
                 ...TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHHH CS
     Histone  76 k..sekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlArr 129
                    +++  +ris++  + + + ++ +l+ +++e++ +++ a R+T+   D+ +++r
  KHJ34322.1  96 RlaRRGGVKRISGSIYDEIRKSMKSYLENVLKETCDVVEFAQRKTVSVTDVIFVLR 151
                 255688899******************************************99988 PP

>> TFIID-18kDa  Transcription initiation factor IID, 18kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.1   2.7e+03      53      73 ..      79      99 ..      61     119 .. 0.63
   2 ?   11.8   0.1   7.5e-05      0.19      32      66 ..     118     152 ..     101     158 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.1
                 .XXXXXXXXXXXXXXXXXXXX CS
  TFIID-18kDa 53 rkitlEDllfliRkDkkKlnR 73
                 rk+t + +  + + D ++l+R
   KHJ34322.1 79 RKLTKDNIRAVTKGDIRRLAR 99
                 444444444444444444433 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 7.5e-05
                  HHHHHHHHHHHHHC-XXXX...XXXXXXXXXXXXX CS
  TFIID-18kDa  32 vrgyliellqqaakvaklrgsrkitlEDllfliRk 66 
                  ++ yl ++l+++ +v +  +++ + + D++f++R+
   KHJ34322.1 118 MKSYLENVLKETCDVVEFAQRKTVSVTDVIFVLRR 152
                  6789******************************8 PP

>> Diphtheria_T  Diphtheria toxin, T domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   6.1e-05      0.16       5      75 ..      81     149 ..      78     153 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 6.1e-05
                   --HHHHHHHHHHHHHHHHSSSHHHHHHHTS--SS--HHHHHHHHHHHHHHHCTSGGGHHHHHHTSS-GGGS CS
  Diphtheria_T   5 ldwdvirdktktkieslkehgpiknkmsespnktvseekakqyleefhqtalehpelselktvtgtnpvfa 75 
                   l  d ir  tk  i  l   g +k ++s s    +  +  k yle++ + + +  e+++ ktv+ t+ +f 
    KHJ34322.1  81 LTKDNIRAVTKGDIRRLARRGGVK-RISGSIYDEIR-KSMKSYLENVLKETCDVVEFAQRKTVSVTDVIFV 149
                   67799******************9.68999888875.5689*************************99985 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   7.6e-05       0.2      30      72 ..     112     154 ..      97     158 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 7.6e-05
                 HHHHHHHHHHHHHHHHHHHHHHTTSS-SS--HHHHHHHHHHTT CS
    Bromo_TP  30 EtLteiaqkYirelgeqaksfaehagRseptlkDvvltLqelg 72 
                 +  ++ +++Y++++ +++    e a R ++++ Dv+++L ++g
  KHJ34322.1 112 DEIRKSMKSYLENVLKETCDVVEFAQRKTVSVTDVIFVLRRIG 154
                 55677899*********************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1247.78
//
Query:       KHJ34323.1  [L=1190]
Description: putative wd repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      7e-15   55.2   4.6    0.00017   22.3   0.1    5.8  5  WD40            WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.015   15.5   0.2       0.74   10.2   0.0    3.6  5  ANAPC4_WD40     Anaphase-promoting complex subunit 4 WD40 dom
        0.3   10.8   2.6        1.1    9.0   2.6    2.0  1  zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.1     0.014        82      11      35 ..      45      68 ..      33      70 .. 0.79
   2 !   12.7   0.0   3.1e-05      0.18       9      38 .]     151     182 ..     145     182 .. 0.83
   3 !   12.4   0.1   3.8e-05      0.23       2      38 .]     196     233 ..     195     233 .. 0.88
   4 !   22.3   0.1   2.9e-08   0.00017       6      38 .]     243     276 ..     238     276 .. 0.86
   5 ?   -3.5   0.0         3   1.8e+04      15      25 ..     424     434 ..     419     435 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.014
                SSEEEEEEETTSSEEEEEETTSEEE CS
        WD40 11 ssvtslafspdgawlasGsdDgtvr 35
                +++ +l+ spdg+ ++ ++ +g  +
  KHJ34323.1 45 KDILCLDRSPDGQRVVIAG-NGVFK 68
                4699**********99888.87766 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 3.1e-05
                 SS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgaw.lasGsdDgtvriWd 38 
                 +H   ++ +a sp+++  l+s+s+Dg+v+ W+
  KHJ34323.1 151 AHeREIYKIAISPYKPHwLLSASRDGSVKSWN 182
                 685459999988888888999**********8 PP

  == domain 3  score: 12.4 bits;  conditional E-value: 3.8e-05
                 EEEEEEESSSSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   2 qclrtltGHssvtslafspdgaw.lasGsdDgtvriWd 38 
                 ++l+t+++ s+v ++ +sp   + +a++++ g + +Wd
  KHJ34323.1 196 RQLHTFKTTSDVLDVEWSPKDGMaFACCTEQGQILVWD 233
                 579****9999***********94467789*******9 PP

  == domain 4  score: 22.3 bits;  conditional E-value: 2.9e-08
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  + +H +  +s+a++p+g ++asG+ D+ +++W+
  KHJ34323.1 243 RINAHfGQCYSIAWHPNGEYIASGGQDQLCHVWS 276
                 456896669************************5 PP

  == domain 5  score: -3.5 bits;  conditional E-value: 3
                 EEEEETTSSEE CS
        WD40  15 slafspdgawl 25 
                  l+fsp g+ l
  KHJ34323.1 424 NLKFSPTGDVL 434
                 578****9976 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.1   6.7e+03      47      78 ..      53      83 ..      43     117 .. 0.52
   2 ?   -2.5   0.1       1.1   6.4e+03      33      66 ..     101     136 ..      80     142 .. 0.58
   3 ?    1.3   0.0     0.073   4.4e+02      36      68 ..     202     235 ..     195     251 .. 0.80
   4 ?   10.2   0.0   0.00012      0.74       2      67 ..     211     277 ..     210     302 .. 0.81
   5 ?    0.3   0.0      0.15   8.8e+02      34      62 ..     415     443 ..     397     447 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.1
  ANAPC4_WD40 47 kpdgklLavaysdgevrlldaesgkvvhslsv 78
                 +pdg+  ++a  +g  +++++e  ++ ++++ 
   KHJ34323.1 53 SPDGQRVVIA-GNGVFKVVKVEMLDIREEIDL 83
                 5555554443.345555555554444444433 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.1
  ANAPC4_WD40  33 eedkedsevrsLaWkpd..gklLavaysdgevrlld 66 
                  +  +++  + +++W ++  +++++ a ++g +  +d
   KHJ34323.1 101 SGINDNLAIVAVKWLHSvlNSIIVAASANGVITAYD 136
                  344555566666664432256666666666666555 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.073
  ANAPC4_WD40  36 kedsevrsLaWkp.dgklLavaysdgevrlldae 68 
                  k+ s v +++W+p dg  +a  +++g++ + d  
   KHJ34323.1 202 KTTSDVLDVEWSPkDGMAFACCTEQGQILVWDLR 235
                  6678899999997467889999999999887765 PP

  == domain 4  score: 10.2 bits;  conditional E-value: 0.00012
  ANAPC4_WD40   2 swcptmDL.iAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrllda 67 
                  +w+p+  + +A  te+g++lv  l      +l  +++ ++  s+aW+p+g+ +a + +d  +++ ++
   KHJ34323.1 211 EWSPKDGMaFACCTEQGQILVWDLRDSTKPQLRINAHFGQCYSIAWHPNGEYIASGGQDQLCHVWSI 277
                  688887764688899999999766555555555588999999*****************99998876 PP

  == domain 5  score: 0.3 bits;  conditional E-value: 0.15
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgev 62 
                  ++ e+++ ++L+++p g +L++  +  ++
   KHJ34323.1 415 NSIEQRSLSNLKFSPTGDVLMILEQRQAI 443
                  55678889999999999999987776665 PP

>> zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   2.6   0.00018       1.1      15      52 ..    1027    1062 ..    1022    1064 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00018
  zinc_ribbon_10   15 tsaknryalICskChshnGlapkeeleevkyrCpkCga 52  
                      +++++ +  IC++C++ + +  +  + + +++C kC++
      KHJ34323.1 1027 SQQNTHVDFICTECKKIFVCD-P-YKPKAQWKCLKCRS 1062
                      567888999********9998.3.34456*******97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       693  (0.0386525); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.77u 0.26s 00:00:01.03 Elapsed: 00:00:00.43
# Mc/sec: 8228.17
//
Query:       KHJ34324.1  [L=561]
Description: putative xlf family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-37  128.7   0.1    2.5e-37  128.7   0.1    1.9  2  XLF       XLF-Cernunnos, XRcc4-like factor, NHEJ component


Domain annotation for each model (and alignments):
>> XLF  XLF-Cernunnos, XRcc4-like factor, NHEJ component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.7   0.1   1.4e-41   2.5e-37       2     179 .]       3     184 ..       2     184 .. 0.91
   2 ?   -2.2   0.3      0.22   3.9e+03      31      78 ..     253     299 ..     233     354 .. 0.59

  Alignments for each domain:
  == domain 1  score: 128.7 bits;  conditional E-value: 1.4e-41
         XLF   2 Wrvleidgse....pkllvklefsessyellltDlanvWseeldrdeilkrakeentsidpsedeeqlavlleklrkaldgskkssaefslnlsskaee 96 
                 Wr l+ + +e    p ll+ +++s+ssy +++tDl+ vWse+l+  ei kr++eentsidps++ +q+a+ll+k+++a++g  ++    +l+l+ + ++
  KHJ34324.1   3 WRHLNSSPCEdtnsPTLLLASNISSSSYRIYITDLTTVWSESLSYLEIRKRSYEENTSIDPSSE-DQFAILLDKIDQAVNGRPGT----ALKLRVNGKK 96 
                 88888887667789************************************************66.**************999999....5555552222 PP

         XLF  97 d.....sLtlkltieLpgplspleWefslvkepsssltkeLvlpllqasaelkrqveeLieilkeKDavIskLldklessGadlsevf 179
                 +     +L l+l + +p+ l  +eW+++l+  ++  lt+++++pll+a +++    + L + lk KD + +kL+dkle++G+dl  vf
  KHJ34324.1  97 TtlgirDLILQLHVDMPQRLTAFEWPVQLSAGSPALLTEAMTIPLLRAYRQSLGNLDFLSQSLKLKDIIVEKLIDKLEEYGIDLGLVF 184
                 24455599999999*********************************************************************98776 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.22
         XLF  31 DlanvWseeldrdeilkrake..entsidpsedeeqlavlleklrkaldg 78 
                 D +  W e++ ++ i  r +   ++ s++     e  ++ + +l ++++ 
  KHJ34324.1 253 DRKEHWWESMLESSIDLRTEFiaTKDSLQEV---EMAQTSFRHLHDGFSD 299
                 5555666666666666666554455555533...3333334444444422 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (561 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3998.67
//
Query:       KHJ34325.1  [L=186]
Description: hypothetical protein EV44_g3371 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.026   14.2   0.0      0.032   13.9   0.0    1.1  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.8e-06     0.032     114     225 ..       2     119 ..       1     133 [. 0.76

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.8e-06
       RVT_2 114 kLnkslyGlkqapllWnekidkvL.kklgferseaesGlyvrgtgegklivalyvddlliagsdikiledvkkelakkfklkdlgkvs.....kfLGie 206
                 k+ k lyG+  a++ W+++ dk   +kl ++ s+    + + ++  +  iv+l  dd l  g++     +v++  ++k   kdl ++s      f G +
  KHJ34325.1   2 KVIKPLYGIPEAGTHWFHTYDKHQcEKLSMTLSSYDPCFLISSKPGAIRIVGLQTDDTLFLGDQDFANLEVRELKNAKLTAKDLNELSpdqplIFNGCK 100
                 56789**************9987515666666666666666665555579*******888877666666778777888888888888744344599999 PP

       RVT_2 207 iaqeaggiklsladyiakv 225
                 ++   ggi+l +++ + ++
  KHJ34325.1 101 LVMVKGGINLFQKNQADRI 119
                 9999999999999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1399.24
//
Query:       KHJ34326.1  [L=383]
Description: putative glycosyl [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
      0.038   13.6   0.7      0.083   12.5   0.7    1.5  1  LD_cluster3  SLOG cluster3 family


Domain annotation for each model (and alignments):
>> LD_cluster3  SLOG cluster3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.7   4.7e-06     0.083      45     108 ..     176     240 ..     170     243 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.7e-06
  LD_cluster3  45 edlgvdyeeavklyqskffkde.fpeeneefenvvyteavdkdreksllamReemlseekfkaav 108
                   +l++d++ av++ q ++ +++   ++ +e++ +++ + + ++ +ksl++  e ml++++++  v
   KHJ34326.1 176 AKLNLDFNGAVQMLQNQYETEQrQQKDFSEWSTITLANVLTQNSNKSLQEFFELMLENQTLRVKV 240
                  67999************977651677999*****************************9987665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       946  (0.0527637); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2931.86
//
Query:       KHJ34327.1  [L=332]
Description: putative chitin synthase export chaperone [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.7e-116  388.7  19.9   1.9e-116  388.5  19.9    1.0  1  Chs7      Chitin synthase export chaperone


Domain annotation for each model (and alignments):
>> Chs7  Chitin synthase export chaperone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  388.5  19.9  1.1e-120  1.9e-116       1     286 [.       2     285 ..       2     286 .. 0.99

  Alignments for each domain:
  == domain 1  score: 388.5 bits;  conditional E-value: 1.1e-120
        Chs7   1 qfgdFdsiCrktalplCnllksskseteakegiepeCyargielantiifnlgsilihivalivtlililrvrskktAvGRkEillflllyllleilel 99 
                 +fgdF+siC+++ +plC++++++ s  e    +e++Cy r+ielantiif+ ++ ++hi+al++t+i+i+++rsk+tAvGRkEi+ f+++y+ll++++l
  KHJ34327.1   2 GFGDFESICHRSMVPLCSVIGPA-SAIEGIIRLEASCYPRNIELANTIIFQGAASFMHIAALLMTVIMIIHIRSKFTAVGRKEITSFFYIYMLLSFISL 99 
                 59********************9.777888899****************************************************************** PP

        Chs7 100 vvdggviplsskvypyfvavqiglisatlwiLllnglvgfqlleDGtplSllllrlsslvlfivtflialdtfkswtaelsstktiaLfvllyllnlvl 198
                 ++d+gv+pl+++ ypyfva q+glisa++++Ll+ng+vgfq++eDGt+lS++llr++++++f +tfl+a +tfksw a+ls+tkti+Lfv+lyll+ + 
  KHJ34327.1 100 ILDSGVVPLGNTFYPYFVAAQAGLISALCMCLLINGFVGFQIYEDGTALSVWLLRTLTFAMFSITFLVATATFKSW-AGLSPTKTIGLFVVLYLLSGIN 197
                 ****************************************************************************.********************** PP

        Chs7 199 lvvyvvlqlilvlrvLeerwplgalllgvllfvigqvllyvlskkiCegvkhyidGlffetlcnllavmmvykfWdsiTeddlefsvg 286
                 +++yvv+q++lv ++L++rwplg++++gv+++v+gq++ly+ s++iC++ +hy+dGlff+t cnllavmmvyk+WdsiT++dlefsvg
  KHJ34327.1 198 IIIYVVSQIVLVTNTLQDRWPLGDIAFGVFFLVLGQLILYFGSNTICNAFQHYLDGLFFATTCNLLAVMMVYKYWDSITREDLEFSVG 285
                 **************************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1020  (0.0568911); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2375.47
//
Query:       KHJ34328.1  [L=328]
Description: hypothetical protein EV44_g3137 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.6e-05   22.9   0.0      0.008   16.5   0.0    2.4  2  CPL              CPL (NUC119) domain
     0.0021   17.7   0.6      0.017   14.8   0.6    2.2  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type


Domain annotation for each model (and alignments):
>> CPL  CPL (NUC119) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0     9e-07     0.008      41     134 ..      77     193 ..      67     197 .. 0.89
   2 !    3.7   0.0    0.0079        71      39      56 ..     244     261 ..     230     267 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 9e-07
         CPL  41 KKdaevRrkELleaispallsaiaknaeellsdnlgsqfvaevLlsaegdkq.....................eaieaiaklakgdlvaee..kdeelh 116
                  Kd+   +  L++a++  +l++i  ++ ++l d++  +++   L ++ + ++                     + ++++++++kg+ ++      +++ 
  KHJ34328.1  77 RKDEVRAYTVLYNAAIGTFLQVIHTDILKVLLDKSELHLMWTYLVTEYKRDTayalvyqlgnlcqlftaydsgKTLSEFIQMFKGEWYKVYrlARDSNE 175
                 566666677899**********************************9998889*********************************9998887555555 PP

         CPL 117 liekpfgsrlLKaLiqgd 134
                   ++ f+++lLK L++ d
  KHJ34328.1 176 EHHQEFANFLLKDLVKRD 193
                 5578************99 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.0079
         CPL  39 tSKKdaevRrkELleais 56 
                 tSKK+  +Rr+ ++++i+
  KHJ34328.1 244 TSKKPVLTRRSGIRKTIT 261
                 9**********9998876 PP

>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.6   1.9e-06     0.017       5     130 ..      88     227 ..      84     234 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.9e-06
  Retrotran_gag_2   5 dakalalIvlsisdsllelvkeektakevWdkLkelyekksaankltlrkklfsl..kmkegesvadhinkleelvneLsa............. 83 
                      ++ a+++ ++ i  + l+ + ++++ + +W  L ++y++++a   ++ + +l++l   ++ g++++++i+ ++  + +                
       KHJ34328.1  88 YNAAIGTFLQVIHTDILKVLLDKSELHLMWTYLVTEYKRDTAYALVYQLGNLCQLftAYDSGKTLSEFIQMFKGEWYKVYRlardsneehhqef 181
                      678999***********************************9999988888877533799999*********9877776665556666777777 PP

  Retrotran_gag_2  84 lgvkiddedkvvllLasLPesyetfvtaiesseedltleevieklle 130
                      ++  ++d  k   lL  L++  +++v+++ + ++dlt+  v+++ll+
       KHJ34328.1 182 ANFLLKDLVKRDSLLDFLGRHKKNVVDNLTT-KTDLTFAVVKQRLLD 227
                      7777777777777888888888888888877.788888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       988  (0.0551063); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2472.94
//
Query:       KHJ34329.1  [L=473]
Description: putative gti1 pac2 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-63  214.5   0.0    1.9e-62  210.6   0.0    2.3  2  Gti1_Pac2  Gti1/Pac2 family
  ------ inclusion threshold ------
      0.053   13.6   1.0       0.52   10.4   0.3    2.3  2  SRP1_TIP1  Seripauperin and TIP1 family
       0.32   10.7   1.0         21    4.9   0.1    2.7  3  LPD13      Large polyvalent protein-associated domain 13


Domain annotation for each model (and alignments):
>> Gti1_Pac2  Gti1/Pac2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.6   0.0   3.1e-66   1.9e-62       1     181 []      11     191 ..      11     191 .. 0.81
   2 ?    1.3   0.0     0.054   3.2e+02      23      43 ..     356     376 ..     348     378 .. 0.89

  Alignments for each domain:
  == domain 1  score: 210.6 bits;  conditional E-value: 3.1e-66
                 SEES---SHHHHHHHHHHHHTTSS---SS---HHHHHHHSSTTEEEEEEHHHH--SS---S--B---EEETTEEEEEB-.......------------- CS
   Gti1_Pac2   1 tfkgyiettkdalllieavlegilkrvtrRlkekErkeliksGsvFvfeeeesgikRWTDGvsWSpSrilgnfLvYrel.......dkkrakkkkkkkk 92 
                 tf g+i++t+dalll+ea+l+g l +v rR++++Er++liksG+vF++ee++sgikRWTDGv WSpSrilgnfLvYrel       +kkra+kk+k++ 
  KHJ34329.1  11 TFYGHIASTQDALLLFEACLSGALAHVARRPHDRERANLIKSGNVFIYEEHSSGIKRWTDGVPWSPSRILGNFLVYRELerpfppgEKKRAMKKSKRSP 109
                 8******************************************************************************44444444444444444433 PP

                 -----------------.................---.-------------------------------EEEEEEEEEETTTEEEEEEE- CS
   Gti1_Pac2  93 kkskestkkeesksekasssssesseakesssssesk.asksskslekdserslvgsltdsykfkkdgLvKkTisvtlkgkelhlisYyk 181
                   +k+++++      ++ss s+     +++ + ++s+ ++ +s+sl+k++ersl+gsl+dsy fk++gLvKkT+svt+ + ++hl+sYy+
  KHJ34329.1 110 GINKSDSYS-----ITNSSISTGY---NPAVAVANSTfETPNSNSLSKETERSLIGSLVDSYGFKEEGLVKKTVSVTVGNISHHLVSYYT 191
                 333333322.....2223333333...444444444448899999********************************************6 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.054
                 SS---SS---HHHHHHHSSTT CS
   Gti1_Pac2  23 ilkrvtrRlkekErkeliksG 43 
                 +l++  rR+++ E+++ i sG
  KHJ34329.1 356 VLSSFARRPSNYEQANSIDSG 376
                 678899**************9 PP

>> SRP1_TIP1  Seripauperin and TIP1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0     0.078   4.7e+02      70      89 ..      63      82 ..      56      88 .. 0.84
   2 ?   10.4   0.3   8.7e-05      0.52      15      87 ..     175     253 ..     168     264 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.078
   SRP1_TIP1 70 aevssmitglPWYssRLepa 89
                +++++   g+PW  sR+ ++
  KHJ34329.1 63 SGIKRWTDGVPWSPSRILGN 82
                67899999********9875 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 8.7e-05
   SRP1_TIP1  15 levllnDvksnlkeYlslaka.nsgfslPsg...vlsvyaalatatddsYttllseidf.aevs.smitglPWYssRLe 87 
                 ++v +  ++++l  Y+++a   n++f+ Ps+     +++      t++++ t ++eid  + v+ +++   P YssR  
  KHJ34329.1 175 VSVTVGNISHHLVSYYTVADVmNNKFTTPSKdprFQQIVPRQDLVTKQNFRTPIDEIDPmDRVEeRTVFSYPTYSSRTG 253
                 6789999************999*****9975333899999999999***********97588962578899****9965 PP

>> LPD13  Large polyvalent protein-associated domain 13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0    0.0089        53      52     105 ..      99     154 ..      97     167 .. 0.80
   2 ?    4.9   0.1    0.0034        21       6      32 ..     185     211 ..     181     223 .. 0.84
   3 ?   -2.3   0.0      0.57   3.4e+03      13      34 ..     401     422 ..     396     425 .. 0.69

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.0089
       LPD13  52 kniveknkrdHkeltledsrkiLnsAl...YnptllgknkpiskPnywvvvktgdkn 105
                 k+ + k +++ ++++ +ds  i ns +   Ynp + + n   + Pn   + k+ +++
  KHJ34329.1  99 KRAM-KKSKRSPGINKSDSYSITNSSIstgYNPAVAVANSTFETPNSNSLSKETERS 154
                 4444.55566799***********988778***************998887777665 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0034
       LPD13   6 sveeletvseipdelFtnpsrdvlLpt 32 
                 +++++ tv ++ ++ Ft+ps+d + ++
  KHJ34329.1 185 HLVSYYTVADVMNNKFTTPSKDPRFQQ 211
                 6789****************9977665 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.57
       LPD13  13 vseipdelFtnpsrdvlLptlp 34 
                 v   +++  +n++ ++ Lpt++
  KHJ34329.1 401 VMRETNNSHNNYTPQRSLPTPS 422
                 4445677778888888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (473 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3666.36
//
Query:       KHJ34330.1  [L=310]
Description: hypothetical protein EV44_g3567 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-05   23.8   1.2    6.9e-05   22.6   1.2    1.6  1  gag_pre-integrs  GAG-pre-integrase domain
  ------ inclusion threshold ------
      0.095   12.7   0.7        3.1    7.8   0.0    3.0  4  HTH_37           Helix-turn-helix domain
       0.65   10.2   6.1       0.08   13.1   1.0    2.1  2  Integrase_H2C2   Integrase zinc binding domain


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   1.2   1.2e-08   6.9e-05      20      64 ..     194     241 ..     176     244 .. 0.80

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 1.2e-08
  gag_pre-integrs  20 nkssinlWHrRLGHpsfsrlkkLfk.kgllpglkisk..sevCeaCql 64 
                      ++ +++  HrR+GHps++rl ++ k +g++ + +i k   + C+ Cql
       KHJ34330.1 194 SEPELRQLHRRFGHPSSRRLLQILKrSGHNVNSSIVKylGKYCHLCQL 241
                      56678899**********988777647777777887777889****98 PP

>> HTH_37  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.1   6.8e+03      28      49 ..      30      51 ..       4      60 .. 0.61
   2 ?    1.3   0.0     0.054   3.2e+02      37      64 ..      70      95 ..      68      97 .. 0.84
   3 ?   -1.4   0.1       0.4   2.4e+03      50      70 ..     138     158 ..     132     162 .. 0.75
   4 ?    7.8   0.0   0.00052       3.1      41      76 ..     191     225 ..     188     229 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.1
                HHCT--HHHHHHHHT--HHHHH CS
      HTH_37 28 ekrelsqseaaqllgiaqPkvs 49
                +  +l ++ ++++l  a P  +
  KHJ34330.1 30 AISQLHDQSIHHALAAAAPIKD 51
                4456777777777777777655 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.054
                HHHHHT--HHHHHHHHTT--TT--HHHH CS
      HTH_37 37 aaqllgiaqPkvsrllrgklsrfsldkL 64
                aaq     +++v +l+  kl+++++d+L
  KHJ34330.1 70 AAQWSTAGEAQVRALQ--KLRNITIDSL 95
                6777777889999999..9*******99 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.4
                 HHHTT--TT--HHHHHHHHHH CS
      HTH_37  50 rllrgklsrfsldkLlnllta 70 
                 +l++ +  ++ ld L+n+l +
  KHJ34330.1 138 SLKDMDTLKVKLDNLRNVLLQ 158
                 577777788999999999865 PP

  == domain 4  score: 7.8 bits;  conditional E-value: 0.00052
                 HT--HHHHHHHHTT--TT--HHHHHHHHHHTTEEEE CS
      HTH_37  41 lgiaqPkvsrllrgklsrfsldkLlnlltalGqkve 76 
                 ++ ++P++ +l r ++   s ++Ll++l++ G++v+
  KHJ34330.1 191 CHLSEPELRQLHR-RFGHPSSRRLLQILKRSGHNVN 225
                 67899*******8.*******************997 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.4      0.62   3.7e+03       9      19 ..      30      40 ..      28      43 .. 0.77
   2 ?   13.1   1.0   1.3e-05      0.08      10      55 ..     198     242 ..     191     245 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.62
  Integrase_H2C2  9 ilkeaHdsagH 19
                     ++++Hd++ H
      KHJ34330.1 30 AISQLHDQSIH 40
                    5899***9666 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 1.3e-05
  Integrase_H2C2  10 lkeaHdsagHlGiektlerlrrryyWpgmrkdvkkyvksCetCqrr 55 
                     l+++H   gH++ ++ l+ l+r  +  + ++ vk   k C+ Cq +
      KHJ34330.1 198 LRQLHRRFGHPSSRRLLQILKRSGHNVN-SSIVKYLGKYCHLCQLH 242
                     89********************998777.6677777789****987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2527.16
//
Query:       KHJ34331.1  [L=481]
Description: putative mfs transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.5e-35  120.3  39.0    4.5e-30  104.8  32.2    2.2  2  MFS_1     Major Facilitator Superfamily
      3e-05   23.5   6.2      0.022   14.0   3.1    2.3  2  MFS_4     Uncharacterised MFS-type transporter YbfB
     0.0056   15.0   1.4     0.0056   15.0   1.4    3.2  3  OATP      Organic Anion Transporter Polypeptide (OATP) family


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.8  32.2   7.5e-34   4.5e-30       2     319 ..      25     386 ..      24     403 .. 0.79
   2 !   19.6   0.5   5.9e-08   0.00035     120     177 ..     414     471 ..     405     476 .. 0.89

  Alignments for each domain:
  == domain 1  score: 104.8 bits;  conditional E-value: 7.5e-34
       MFS_1   2 llaaflsalarsilgpalplalaedlgispse....igllltlyalgaavaslplGrlsdrfGrrr.vlllglllfalglllllfasslw.lllvlrvl 94 
                  +a+f   + ++++ p+lp +l++ l++ +se    i+lll+ ya  +++a+lp G+++d +  rr  +l+gl +++++++ll++  ++w +l+++r++
  KHJ34331.1  25 GIAIFTDLFLYGLVVPILPFILKSRLHFPHSEiqesISLLLAYYAGSSVLAALPEGYIADHLPTRRlPFLMGLMSLFISTFLLWL-GQSWnILVLARII 122
                 5899999********************999998899999999999999***************9999************555555.88888******** PP

       MFS_1  95 qGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee..... 188
                 qG+ a++l++++++li d +  ++ g a++ + +++ +G +++p++gg+++++lg  +vf i+  ++++ +v+    ++  +++ +++ ++++      
  KHJ34331.1 123 QGISASMLWTVSLTLILDTVGSRRLGVALSSIFGFVCVGQLFAPVIGGIVYQHLGEGWVFSIAFMLLIIDLVM---RILIIEKKVAKFHGWDKIsspsq 218
                 **********************************************************************884...44344444444445555555556 PP

       MFS_1 189 ..............................kgtgpaplvp.......awkallkdpvlwillialllfffgfsglltllplylqevlglsglllaglll 250
                                                        p       ++ + +++p ++++l+ +++ ++ ++++ ++l +   + + ++   ++gl++
  KHJ34331.1 219 hevaqanetsplisnidtsnsdlvkwklpsTV-------PswfsklpVLYLTFTSPRIFACLLLCFTHAMTLAIFDATLSIQSLDLFSFT-SRSIGLMF 309
                 66665555577788866666666433333222.......234444445556666665657888888888888889999998667888888.68888888 PP

       MFS_1 251 allalvgailallagrlsdrlgrrrrlllallllllaalglallavt........ssavllll.....vlvliGfglgfvfp 319
                 + l l ++ +++++g ++dr+g +++   +ll+l+l + ++ ++ +          +     +     +lv++Gfg +++++
  KHJ34331.1 310 MPLILPSLLISPIIGVIIDRYGTKIPAATGLLILALPLSLFRIVKAVppggdgyvFE-----VtkftiLLVVCGFGIACISS 386
                 8888888888************99998888888888888888888885555444433.....14555488889999998866 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 5.9e-08
       MFS_1 120 graigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepp 177
                 ++ +++ ++ fslG  lgpl+++++  ++g+ ++ y la+ ++l++++ +l+l e+p+
  KHJ34331.1 414 AQLYAITNMIFSLGLTLGPLVASIIKLNFGYIVMNYCLAAWCVLVCIVCILFLGEKPK 471
                 577899***************************************9977788877776 PP

>> MFS_4  Uncharacterised MFS-type transporter YbfB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   3.1   3.7e-06     0.022      49     170 ..      80     200 ..      33     229 .. 0.67
   2 !   10.2   0.1   5.4e-05      0.32     313     361 ..     414     462 ..     387     464 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 3.7e-06
       MFS_4  49 afalsagaeRlr.llagllatvllllamaltesfaaflliRflaGvasAvvlvfgsslvlahaaaarrervgallfaGvGlGiavsgllvllllqlgls 146
                  + + + ++R    l+gl++ +++++  +l +s  +++l+R++ G+++ +   +  +l+l  +   r +  ++ +f+ v +G + + ++  ++  ++l+
  KHJ34331.1  80 GYIADHLPTRRLpFLMGLMSLFISTFLLWLGQSWNILVLARIIQGISASMLWTVSLTLILDTVGSRRLGVALSSIFGFVCVGQLFAPVIGGIV-YQHLG 177
                 3455677777666*********************************9999999999999**99999999999******999988776654444.44444 PP

       MFS_4 147 asslWlalavlsa.vllllvalllp 170
                 +   W+   ++ + ++ l++ +l++
  KHJ34331.1 178 EG--WVFSIAFMLlIIDLVMRILII 200
                 44..433332222022233333333 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 5.4e-05
       MFS_4 313 rrllglmTasfgigQilGpllasllaeatgslalallvaaaalvlaali 361
                  +l ++  ++f +g +lGpl+as+++   g + +  ++aa  ++++++ 
  KHJ34331.1 414 AQLYAITNMIFSLGLTLGPLVASIIKLNFGYIVMNYCLAAWCVLVCIVC 462
                 4567777899*******************************99999886 PP

>> OATP  Organic Anion Transporter Polypeptide (OATP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0     0.086   5.2e+02     145     175 ..      70     100 ..      63     111 .. 0.86
   2 !   15.0   1.4   9.4e-07    0.0056     132     192 ..     113     173 ..     102     181 .. 0.91
   3 !    2.9   0.7    0.0043        26     331     387 ..     413     467 ..     405     471 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.086
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP 145 GatpiytlGisYidDnvkkknsplylgilya 175
                 G++++ +l   Yi D+  +++ p+++g+++ 
  KHJ34331.1  70 GSSVLAALPEGYIADHLPTRRLPFLMGLMSL 100
                 78888889999****************9975 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 9.4e-07
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP 132 vllfflaqlllGiGatpiytlGisYidDnvkkknsplylgilyalrilGpalGfllGslll 192
                 + +++la +++Gi a++++t+ ++ i D v +++  + l+ ++ +  +G  ++ ++G+++ 
  KHJ34331.1 113 WNILVLARIIQGISASMLWTVSLTLILDTVGSRRLGVALSSIFGFVCVGQLFAPVIGGIVY 173
                 3499************************************************999999876 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.0043
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP 331 eAnlltGvvvipgaalGillgGllvkklklsakklaklvlvvsllsllllllllflg 387
                 +A+l+  +++ + + lG+ lg l+ + +kl+   +++  ++++ + l++++++lflg
  KHJ34331.1 413 YAQLY--AITNMIFSLGLTLGPLVASIIKLNFGYIVMNYCLAAWCVLVCIVCILFLG 467
                 56666..566677889****************9999998899999999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.22s 00:00:00.76 Elapsed: 00:00:00.38
# Mc/sec: 3772.40
//
Query:       KHJ34332.1  [L=472]
Description: putative membrane transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-37  128.9  33.7    1.7e-34  119.3  24.5    2.0  2  MFS_1     Major Facilitator Superfamily
    0.00057   18.3   5.5     0.0013   17.1   4.8    2.1  1  OATP      Organic Anion Transporter Polypeptide (OATP) family


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.3  24.5   1.9e-38   1.7e-34       2     329 ..      26     396 ..      25     400 .. 0.81
   2 !   15.3   1.8   8.2e-07    0.0074     120     174 ..     416     470 ..     406     472 .] 0.89

  Alignments for each domain:
  == domain 1  score: 119.3 bits;  conditional E-value: 1.9e-38
       MFS_1   2 llaaflsalarsilgpalplalaedlgispse....igllltlyalgaavaslplGrlsdrfGrrr.vlllglllfalglllllfasslw.lllvlrvl 94 
                 ++a f   + ++++ p+lp +l++ l++ ++     ++lll+ ya +++vaslp+G+++d + +r   +l+gl++++++++ll++  + w +l+ +r++
  KHJ34332.1  26 SIAMFTDLFLYGLIVPTLPFILSSRLHMPHDDiqqsVSLLLAYYAGASVVASLPAGYIADLLPSRQlPFLTGLVAMFISTALLWL-GQNWtILAMARIF 123
                 5899999********************999886666777888899999*******************************555556.55566******** PP

       MFS_1  95 qGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee..... 188
                 qG+ a++++++g+++i d +  ++ g +++ + +++ +G +l+p+lggl++++lg  +vf +   ++++ f +    l + +++  + +++++      
  KHJ34332.1 124 QGISASVVWTIGLTMILDAVGSRNLGVVLSSIFGFICVGELLAPVLGGLVYQQLGEAWVFNVGFMMLAIDFFV--RIL-VVEKKVVKRNGWDKMlshkd 219
                 *******************************************************999999999999999662..333.33333333334444456888 PP

       MFS_1 189 ...............................kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlglsglllaglllallalv 256
                                                  +++++ +p+  +  ++p +++ l+ +++ ++ + ++ +++pl  ++ + ++   +ag+l+  l l 
  KHJ34332.1 220 sfptnetdplickkntnassktalskwelpsDVPKWFSKLPVVYLTATSPRILASLLLCFTHSMTLGIFDATIPLESVDLFSFT-SRSAGFLFIPLILP 317
                 89998889999988887776666665554443333333333444555555454677777777888888*******888999999.68888888888888 PP

       MFS_1 257 gailallagrlsdrlgrrrrlllallllllaalglallavt...ssavllll.....vlvliGf.glgfvfpsllalasdla 329
                  + la++ag ++dr+g +++  ++ll+l++ + ++ +++++   +    +++     +++l+++ g+g++++s+++l+++++
  KHJ34332.1 318 YLLLAPVAGLVVDRYGTKIPAAIGLLILACPLTLFGFVNAAspgQ---EGHFlevtkFSILLSIcGVGIASISSQSLIDESI 396
                 8888*************9999999999999999999999995553...44444558899999999***********999875 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 8.2e-07
       MFS_1 120 graigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpe 174
                 ++ +++ ++ fslG  lgpl++g +  ++g++ + y la+ ++la +l  l+l e
  KHJ34332.1 416 AQLYAMNNIVFSLGLTLGPLIAGSIRMNFGYPIMNYCLAGWCVLASILCTLFLGE 470
                 6788999**************************************9987777765 PP

>> OATP  Organic Anion Transporter Polypeptide (OATP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   4.8   1.4e-07    0.0013     132     193 ..     114     175 ..     104     359 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 1.4e-07
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        OATP 132 vllfflaqlllGiGatpiytlGisYidDnvkkknsplylgilyalrilGpalGfllGslllk 193
                 ++++ +a +++Gi a++++t+G++ i D v ++n  + l+ ++ +  +G  l+ +lG+l+ +
  KHJ34332.1 114 WTILAMARIFQGISASVVWTIGLTMILDAVGSRNLGVVLSSIFGFICVGELLAPVLGGLVYQ 175
                 4599*****************************************************98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (472 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      237  (0.0132188); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3421.60
//
Query:       KHJ34333.1  [L=374]
Description: putative saga complex component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-26   92.2   0.4    1.4e-26   92.2   0.4    2.1  2  SCA7      SCA7, zinc-binding domain
  ------ inclusion threshold ------
       0.21   10.9   3.2       0.46    9.8   3.2    1.5  1  DUF4820   Domain of unknown function (DUF4820)
        1.1    7.4   6.4        1.5    7.1   6.4    1.1  1  CDC45     CDC45-like protein


Domain annotation for each model (and alignments):
>> SCA7  SCA7, zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.4   2.0         3   1.8e+04       3      16 ..     123     136 ..     121     141 .. 0.51
   2 !   92.2   0.4   2.3e-30   1.4e-26       2      67 ..     186     250 ..     179     251 .. 0.94

  Alignments for each domain:
  == domain 1  score: -4.4 bits;  conditional E-value: 3
        SCA7   3 kkkkkkkkkkkevd 16 
                 +k+++kk +k+  d
  KHJ34333.1 123 QKAQRKKEQKEARD 136
                 44455555555545 PP

  == domain 2  score: 92.2 bits;  conditional E-value: 2.3e-30
        SCA7   2 kkkkkkkkkkkkevdvdkqCGVilpngkpCtRsLtCksHslgakraVegRskpfdvLlaeykkkkq 67 
                 +++k + +k +++vdv++qCGV l++g pC+RsLtCksHs+gakraV gRs p+d Lla+y+kk+q
  KHJ34333.1 186 DEPKPRVPKFRGPVDVERQCGV-LKDGVPCARSLTCKSHSMGAKRAVAGRSLPYDFLLAAYQKKNQ 250
                 56788889999***********.789**************************************98 PP

>> DUF4820  Domain of unknown function (DUF4820)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   3.2   7.8e-05      0.46     143     226 ..      96     176 ..      89     179 .. 0.65

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 7.8e-05
     DUF4820 143 LstliCsrpgrsipvsseldnsartlterksekesaesseskkrnkeerdaeseeessedeeeeetvkellekyanenseddsd 226
                 ++ +iC +      vs    n+ ++++ ++++++++e++e ++r+++e +   +++   de+ +   ++ ++k  + +++ d d
  KHJ34333.1  96 IRCIIC-KKMILKSVSGPHVNACNAIK-KQKAQRKKEQKEARDRERREAEVVADDDND-DEDGDYKTSNVIKKGKKRKADTDTD 176
                 577899.44434446666666666666.456666777778888888788877777666.5666666677777766666655555 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   6.4   0.00024       1.5     127     196 ..     121     203 ..     107     267 .. 0.45

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.00024
       CDC45 127 eeeeesdeedeeeeeeddddeeeeeeeeedeedeeedeeeskkkrk.sksdeeeesddddersrkrrrse...............p 196
                 ++++ +++++  ++ e  d+e++e e   d+++++ed++ ++++   + ++++ ++d+d+ ++ k++++e               +
  KHJ34333.1 121 KKQKAQRKKE--QK-EARDRERREAEVVADDDNDDEDGDYKTSNVIkKGKKRKADTDTDRVHKLKKKKDEpkprvpkfrgpvdveR 203
                 3333332211..11.11222222222222222222222222222221222222223333333333333333444444455555550 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1469  (0.0819343); expected 358.6 (0.02)
Passed bias filter:                      640  (0.0356964); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 2761.96
//
Query:       KHJ34334.1  [L=196]
Description: hypothetical protein EV44_g3364 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.15   11.9   0.0       0.21   11.5   0.0    1.1  1  CBM9_1    Carbohydrate family 9 binding domain-like


Domain annotation for each model (and alignments):
>> CBM9_1  Carbohydrate family 9 binding domain-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   1.2e-05      0.21      60     126 ..      72     141 ..      60     152 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 1.2e-05
                 SSG...GG.SSEEEEEEETT----SS--TTEEEEEEETT--EEE-TT-...-GGGEEEEEEEETTEEEEEE CS
      CBM9_1  60 adp...we.dDsvEiflDennsktteynandfqyrvnldneasvdegkkkliaegvtsaskkseggYivEa 126
                 +     ++ +DsvE  +D++++k  e++   + + v +   + ++++ +   a+++ s  ++++++ i+Ea
  KHJ34334.1  72 SSSdlnYDsNDSVESLIDQKANKPPENGPPEGDFSVLFGITQ-IRNDAGTSRASHISSNESQHGASSIMEA 141
                 3334566526****************************9999.66666678999*****999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1485.37
//
Query:       KHJ34335.1  [L=145]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       292  (0.0162865); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1072.81
//
Query:       KHJ34336.1  [L=482]
Description: putative developmental regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.6e-36  124.0   2.5    3.6e-28   99.2   0.1    3.6  3  Velvet    Velvet factor


Domain annotation for each model (and alignments):
>> Velvet  Velvet factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.3   3.3e-12     6e-08       2      62 ..      27      84 ..      26      90 .. 0.83
   2 !   99.2   0.1     2e-32   3.6e-28     135     249 ..      87     192 ..      83     194 .. 0.96
   3 ?  -10.3  14.1         1   1.8e+04     124     125 ..     285     342 ..     202     450 .. 0.48

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 3.3e-12
                EEEEEE---EEE---SS-S-----BS--EEEEEEEET.TT-SB--GGG---TTEEEEEEEEE CS
      Velvet  2 sLevvQqPkrARmCgfgdkdrrpidPppvvqLrvtda.etnsevdveeldssffvvtvdLws 62
                ++ ++Q+P  AR++  +dk+r p+dPpp++qL v    +     + + l+s++ ++ ++L  
  KHJ34336.1 27 EIIIRQEPNCARVSLGKDKERKPVDPPPIIQLKVNPNiD----PKQTFLQSPYIFMSCSLIG 84
                5679****************************9998322....234579**********986 PP

  == domain 2  score: 99.2 bits;  conditional E-value: 2e-32
                 ---------EESEEE--EEE-EEEE-TT--EEEEEE---EEESS-EEEEEEEEEEE-B-S--B--S..SEEEEEEEEE---EEEE-TTT--------HH CS
      Velvet 135 ssnqasskltrnLiGslvasafrlkdpedkpgifFvfqDLSVRteGtFrLrfrlvnvgaeavaveekegsapvlaevfSdpFtVysakkFpGvlesTaL 233
                 ++nq+ ++l  +L+G++v+s+ rlkd+++++g fFv  DLSV++eG Fr rf l+++ +         +++  ++ ++S+pF ++s+k+FpG +e+T L
  KHJ34336.1  87 DHNQPPGTLGASLTGTVVSSLHRLKDTDNQDGGFFVWGDLSVKIEGHFRFRFILFEIFE---------DHVWYIKDIVSSPFPIFSSKNFPGNPETTFL 176
                 56788899999************************************************.........99***************************** PP

                 HHHHHHTT----XXXX CS
      Velvet 234 skalakqGikipiRkd 249
                 ++++ +qGik+++Rk+
  KHJ34336.1 177 TRSFGDQGIKVRVRKE 192
                 **************94 PP

  == domain 3  score: -10.3 bits;  conditional E-value: 1
                 -........................................................- CS
      Velvet 124 e........................................................k 125
                 e                                                        +
  KHJ34336.1 285 EsaqiptygqslgyttrqyvdtqsnaflsynsqsqqagafsytcepspifsqstaprQ 342
                 0111112222233333333333333333333333333334433333444444444440 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       464  (0.0258799); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 3290.17
//
Query:       KHJ34337.1  [L=667]
Description: hypothetical protein EV44_g0920 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.9e-16   58.3   0.1    2.6e-15   56.7   0.0    1.7  2  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.7   0.0   1.5e-19   2.6e-15       5     222 ..     232     454 ..     228     468 .. 0.84
   2 ?   -2.2   0.1      0.14   2.5e+03     131     176 ..     518     563 ..     516     576 .. 0.82

  Alignments for each domain:
  == domain 1  score: 56.7 bits;  conditional E-value: 1.5e-19
       RVT_2   5 lvslPkdrkaigsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaaeeelvvhqldvdsafLnae..ldeevyvkqPp 101
                 l + P + +   sr+v   k++  +++  k+ lvaq f+ k g+d+  + +P i+  s +++lal+++ +l ++  d++ a++++   l  + ++++Pp
  KHJ34337.1 232 LSDIPLGTRIFNSRFVDEVKNKGTDKAYEKSPLVAQAFNDK-GKDFVLTQSPTIQRVSQHVILALSVTLQLNLYIRDISQAYVQSStnLCRHFFIRPPP 329
                 5678999999**********999999999*********986.89***************************************9861155679999999 PP

       RVT_2 102 GfeidreeekvykLnkslyGlkqapllW.nekidkvLkklgferseaesGlyvrgtgegklivalyvddlliagsdikiledvkkelakkf.....klk 194
                     +   + + k+ k lyG+  a   W n+ + +   kl++ +s+    l   +  ++  i+++  dd l  ++++  +++  +  ++ f     ++ 
  KHJ34337.1 330 ELAEE---GTILKIIKHLYGIPEARNHWlNTYLRHHTDKLQMLQSTYDPCLLYSNCNDDLCILGIQTDDTLFGANETFCIKEQTQLAKAGFiakgrEML 425
                 88766...99******************7788999**************999999899999*************9999999877665555522222555 PP

       RVT_2 195 dlgkvskfLGieiaq.eaggiklsladyi 222
                  +++  kf G +i   e + i+l++a++ 
  KHJ34337.1 426 TISTPIKFNGGKINLeEDNSITLTQAQHC 454
                 66666677777776546677888887765 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.14
       RVT_2 131 ekidkvLkklgferseaesGlyvrgtgegklivalyvddlliagsd 176
                 + i+++++ ++++ +++  G+ + +  e  l v ++vd  +  ++d
  KHJ34337.1 518 TDIKQLIQRINWQIKNSYRGIKFVKLDEISLKVLVFVDSSFDNSKD 563
                 6788999999999999999997777789999999999987776666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (667 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       826  (0.0460706); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.26s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 4530.37
//
Query:       KHJ34338.1  [L=299]
Description: putative ppe family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0044   17.0   2.9     0.0044   17.0   2.9    2.2  2  Mucin       Mucin-like glycoprotein


Domain annotation for each model (and alignments):
>> Mucin  Mucin-like glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   2.9   2.5e-07    0.0044       8      90 ..       8      91 ..       1     137 [. 0.66
   2 ?   -3.7   2.6      0.62   1.1e+04      31      46 ..     233     248 ..     217     293 .. 0.63

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 2.5e-07
       Mucin  8 calLvlaLcCCa.svCvtangeGqsdaavveaaegqskltttttttkppttttttt...............tasttittkttkattttttttttttate 90
                  lL la    a  + ++a  +G s++a+ +++++qs++ +t  +  + tt+ +t+                               +++  + t+ t+
  KHJ34338.1  8 T-LLALAHAAVAgPISLQARAKGSSNNATSTSQSSQSSKSSTKAAQSSGTTPNVTKdsvsraadnfaqdagI--------------VSNAINKMTSMTD 91
                3.56665544431477899999*********************************97665554444443332..............3333222222222 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 0.62
       Mucin  31 sdaavveaaegqsklt 46 
                 +++++ ++++g++k++
  KHJ34338.1 233 NNNNNNNSSNGNNKNN 248
                 4444444444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1924  (0.107312); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                       114  (0.00635841); expected 17.9 (0.001)
Passed Fwd filter:                        35  (0.00195214); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.32s 00:00:01.07 Elapsed: 00:00:00.49
# Mc/sec: 1821.89
//
Query:       KHJ34339.1  [L=244]
Description: putative ppe family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1085  (0.0605165); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1881.53
//
Query:       KHJ34340.1  [L=1344]
Description: putative phospholipid-transporting atpase 1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-82  276.5  16.3    2.3e-82  276.5  16.3    2.3  3  PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-t
    1.1e-25   89.1   7.7    3.1e-25   87.6   7.7    1.9  1  PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
    3.2e-11   43.9   0.0    9.5e-06   26.0   0.0    3.4  3  Hydrolase        haloacid dehalogenase-like hydrolase
    2.3e-10   40.4   0.0    7.2e-10   38.8   0.0    1.9  2  Cation_ATPase    Cation transport ATPase (P-type)
    6.1e-08   32.4   0.0    1.7e-07   31.0   0.0    1.8  1  E1-E2_ATPase     E1-E2 ATPase
    0.00092   19.0   0.5      0.016   15.0   0.2    2.5  2  Hydrolase_3      haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> PhoLip_ATPase_C  Phospholipid-translocating P-type ATPase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.8       2.6   7.8e+03      40      59 ..     243     262 ..     234     295 .. 0.58
   2 ?   -1.5   1.2      0.59   1.8e+03     138     179 ..     520     562 ..     474     565 .. 0.51
   3 !  276.5  16.3   7.7e-86   2.3e-82       1     249 []    1017    1269 ..    1017    1269 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 2.6
  PhoLip_ATPase_C  40 nvvftlvqfwfqfyngfsgq 59 
                      n++ +++ f+f+ ++ f   
       KHJ34340.1 243 NFATFIPKFIFEQFSKFANV 262
                      44444444555444444433 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.59
  PhoLip_ATPase_C 138 ddssfsdgktndlqlfgtlvftalvlvvnlkval.etktwtli 179
                      +++ +++ k+++   f   v +++++ + l v l  +k+w+ i
       KHJ34340.1 520 STTIWEKVKQFGSDIFTYWVLYSALVPISLFVTLeIVKYWHAI 562
                      2222225555555555555555555555555555235566544 PP

  == domain 3  score: 276.5 bits;  conditional E-value: 7.7e-86
  PhoLip_ATPase_C    1 vraSDyaiaqFrfLkrLLlvhGrwsyrRisklilyffyKnvvftlvqfwfqfyngfsgqslyeswlltlynllftslpvivlgifdqdvsae 92  
                       +r++D ai+qFr+L++LLlvhG wsy+R+sk+ily+fyKn+++ ++qfw+ f n+fsg  +yesw+l++yn++ft+lp++++gifdq +sa+
       KHJ34340.1 1017 ARSADVAIGQFRYLRKLLLVHGAWSYQRVSKVILYSFYKNITLHMTQFWYTFQNAFSGEVIYESWTLSFYNMFFTVLPPLAMGIFDQFISAR 1108
                       69****************************************************************************************** PP

  PhoLip_ATPase_C   93 lllkyPelYklgqknklfnlktfllwileglyqsliifflsylv.lddssfsdgktndlqlfgtlvftalvlvvnlkvaletktwtliliil 183 
                       +l +yP+lY+lgqkn++f++++f  w+ +g+y+sli+++ s l+ l+d  +sdgkt++++ +gt  +t+++ +v+ k al t+ wt +++i+
       KHJ34340.1 1109 ILDHYPQLYQLGQKNMFFKMHSFSSWVGNGFYHSLILYIASQLIwLRDLPQSDGKTAGHWVWGTGLYTTVLATVLGKAALVTNVWTKYHVIA 1200
                       *****************************************99977777777**************************************** PP

  PhoLip_ATPase_C  184 ilgsillyflflllyssllps...ssefygvleelfsspsfwlvlllvvvvallpdllikvlkrtffps 249 
                       i gs+++++ fl++y ++ p    s ef gv+ +l+ sp fwl ++++++++l++d+ +k+ kr++fp+
       KHJ34340.1 1201 IPGSMVVWLGFLAIYANFSPRfgfSEEFNGVIPRLYPSPVFWLQVIVLPTLCLIRDISWKYAKRMYFPQ 1269
                       *****************99989**99****************************************995 PP

>> PhoLip_ATPase_N  Phospholipid-translocating ATPase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.6   7.7   1.1e-28   3.1e-25       1      67 []     219     285 ..     219     285 .. 0.97

  Alignments for each domain:
  == domain 1  score: 87.6 bits;  conditional E-value: 1.1e-28
  PhoLip_ATPase_N   1 vyindreenekkkyasNkIsTsKYtlltFlpknLfeqFrrvaNlYFLviailqliPqisplspvtti 67 
                      +yind++++ +kk++ N+IsT+KY+++tF+pk++feqF+++aN++FL++a lq+iP+isp++++tti
       KHJ34340.1 219 IYINDSSAKMSKKFVGNYISTAKYNFATFIPKFIFEQFSKFANVFFLFTAALQQIPEISPTNKYTTI 285
                      79***9999999*****************************************************97 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0      0.02        61       3      22 ..     595     614 ..     593     712 .. 0.89
   2 !   26.0   0.0   3.2e-09   9.5e-06      75     149 ..     807     880 ..     750     913 .. 0.86
   3 !   10.0   0.0   0.00026      0.78     172     209 ..     964    1002 ..     940    1003 .. 0.78

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.02
                 EEEEESBTTTBCHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxx RF
   Hydrolase   3 tvvfDkdGTLttgepsvedv 22 
                  ++ Dk+GTLt  +++ +++
  KHJ34340.1 595 YIFSDKTGTLTCNQMEFKQC 614
                 5899*******999988774 PP

  == domain 2  score: 26.0 bits;  conditional E-value: 3.2e-09
                 HHHHHH.HCHHHHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEEEEESSEHHHHH CS
                 xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  75 ewltal.dippdlgaaigsaqsqgrtvallqaralavftiadplkvkpeaaeavasLkaagievvlltgdnpetae 149
                 +w++   +  + +g + +++ +++ +   ++  +l+  +i+d   + +++ e++++L++agi++++ltgd +eta 
  KHJ34340.1 807 DWWNIFdKAQNTVGGNRSEELDKAAELLEHNFYLLGATAIEDR--LQDGVPETIHTLQEAGIKLWILTGDRQETAI 880
                 455555666777888888888888888888999**********..****************************995 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00026
                  TTTSHHHHHHHHHHHT...STGGGEEEEESSHHHHHHHHHT CS
                  xxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  172 akpspegkvaaireLq...gkpeevamVGDgvnDaaalaaA 209 
                    +sp +k  +++  +     +   +++GDg+nD+++++aA
  KHJ34340.1  964 CRVSPLQKALVVKLVKrhiNAI--LLAIGDGANDVSMIQAA 1002
                  5688999999999998432224..89*************99 PP

>> Cation_ATPase  Cation transport ATPase (P-type)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.8   0.0   2.4e-13   7.2e-10      19      88 ..     688     768 ..     605     770 .. 0.82
   2 ?   -3.9   0.0       5.3   1.6e+04      16      28 ..     868     880 ..     862     889 .. 0.84

  Alignments for each domain:
  == domain 1  score: 38.8 bits;  conditional E-value: 2.4e-13
  Cation_ATPase  19 llGnktEsALlvlaekl............gldteelreetkkvqeipFnssrKrmsvvlklepekkvrlyvKGApeiilkrC 88 
                       +++E AL++ ae l            +  ++    e++ ++  +Fns+rKrms++++  p++k+r+y+KGA ++il+r 
     KHJ34340.1 688 QAASPDEGALVEGAEILgyrftarkpkslQVTVNGEVYEYELLALCEFNSTRKRMSTIFRC-PDGKIRCYCKGADNVILERL 768
                    567899999999999997777766666555555555566*********************9.8****************985 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 5.3
  Cation_ATPase  16 evkllGnktEsAL 28 
                     + l+G+  E+A+
     KHJ34340.1 868 LWILTGDRQETAI 880
                    68899******98 PP

>> E1-E2_ATPase  E1-E2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0   5.6e-11   1.7e-07       2     135 ..     313     499 ..     312     556 .. 0.83

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 5.6e-11
                   SS--EEEEE-TTS-EEEEGGG--TTSEEEEETT-B--SEEEEEEE-S.....EEE-TTTS---S-EE-............................. CS
  E1-E2_ATPase   2 llpptakvirdgteeeidakelvpGDivllkagdrvpaDgrivegsa.....evdesaLTGEslpvek............................. 64 
                   l+ ++a+v++++  +e +  ++ +GDi+ +++++  paD++++ +s+      ++++ L GE     k                             
    KHJ34340.1 313 LNNAKARVLKGNVFKEKKWFNVAVGDILRVESEEAFPADIVLLASSEpdglcYIETANLDGETNLKIKqaiprtcnmvspndlskfdgvlhseqpns 409
                   78899***************************************777777779******************************************99 PP

                   .....................G-TTEE-TT-EEEE-E.EEEEEEE-TTTSTTTTTSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHHH CS
  E1-E2_ATPase  65 .....................ekgdmvfsGtvvvsge.akavVtatgedtelgkiarlveeakskktplqkkldklgkvlvpvvlliallvfl 135
                                        +  + +  G++  + + +++vV+ tg +t+l + a+++     k+t ++++l+kl+ +l+ + + ++++  +
    KHJ34340.1 410 nlytyegtltisgqgektislQPDQLLLRGATLRNTPwIHGVVISTGHETKLMRNATATPI---KRTAVERQLNKLVLMLIGILISLSVISSI 499
                   9999999999999999999999999999999999965489**********99887766554...47777777777776666655555555443 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0       0.1   3.1e+02      17      47 ..     851     881 ..     846     894 .. 0.83
   2 !   15.0   0.2   5.2e-06     0.016     206     227 ..     986    1007 ..     942    1017 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.1
                  -HHHHHHHHHHHHTTSEEEEE-SS-HHHHHH CS
  Hydrolase_3  17 sektkeaikklkekgikvviATGRslravlp 47 
                  ++   e+i+ l+e+gik+ i TG   +++++
   KHJ34340.1 851 QDGVPETIHTLQEAGIKLWILTGDRQETAIN 881
                  5667799****************76666655 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 5.2e-06
                   EEEEESSGGGHHHHHHSSEEEE CS
  Hydrolase_3  206 viafGDgeNDieMLeaaglgvA 227 
                    +a+GDg ND++M++aa +gv 
   KHJ34340.1  986 LLAIGDGANDVSMIQAAHIGVG 1007
                   58****************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       848  (0.0472977); expected 358.6 (0.02)
Passed bias filter:                      608  (0.0339115); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.91u 0.28s 00:00:01.19 Elapsed: 00:00:00.44
# Mc/sec: 9190.71
//
Query:       KHJ34341.1  [L=183]
Description: putative glycosyl [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1484.12
//
Query:       KHJ34342.1  [L=544]
Description: putative transcription initiation factor iif subunit alpha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.085   12.9   0.1       0.26   11.3   0.1    1.9  1  BACON     Putative binding domain, N-terminal
        7.4    6.5  14.4         11    5.8  14.4    1.3  1  TFIIA     Transcription factor IIA, alpha/beta subunit


Domain annotation for each model (and alignments):
>> BACON  Putative binding domain, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   2.9e-05      0.26      14      35 ..     422     446 ..     413     447 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.9e-05
       BACON  14 vspas...tltvtvaaNtsgeeRta 35 
                 +spas    +t++v++N+s++ R++
  KHJ34342.1 422 ISPASdagDVTFSVTDNDSDSGRSG 446
                 47888889**********9999*98 PP

>> TFIIA  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8  14.4    0.0013        11     107     248 ..     117     289 ..      34     346 .. 0.42

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0013
       TFIIA 107 nssaataatfslpakleppvqipa.gvtlqtasg..qlykvnvqasgaqqiaaqplqqvvqqsqgsaaqssvaalqaqsqqaqalaepqqq.lekq... 198
                 n   ++  t+   +   p+++i   + ++  a++  ql  +n                    +q+++ q+++ ++q + qq+q++ +  qq  +++   
  KHJ34342.1 117 NICGSQFYTMPEDILAPPEIHIDEaSCEQMDANYyaQLIATNRYLA----------------EQQQRLQQQLRNVQVAAQQFQGMNLGLQQcSTPPitp 199
                 1112222233333333333333221222222222222222222333................3334444444444433334444433333322211211 PP

       TFIIA 199 .......................................qqq.qqqqqqqqqqqqvqqqqqeesqqaqqasqe..qvagsqvessqtdgaed 248
                                                        q+  q  q +++q++q   ++ + ++ ++++  +  +++    +++qt ga++
  KHJ34342.1 200 qslyqqqlkynlqtianpfgnmlpiypsyniingnpahlQSNqQAGQLENLQSAQNFANHTSAQKTPAHT--HvrNFTLLPESNTQTLGASS 289
                 1111111111122333335556666666655555543321110111111111112222222111111111..12344442223455555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (544 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       653  (0.0364214); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.20s 00:00:00.71 Elapsed: 00:00:00.35
# Mc/sec: 4609.53
//
Query:       KHJ34343.1  [L=266]
Description: putative kinetochore protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-45  154.2   6.6    5.1e-45  153.8   6.6    1.1  1  FTA4      Kinetochore complex Fta4 of Sim4 subunit, or CENP-5
  ------ inclusion threshold ------
       0.11   12.6   5.2        2.5    8.3   0.1    2.8  2  Med9      RNA polymerase II transcription mediator complex su


Domain annotation for each model (and alignments):
>> FTA4  Kinetochore complex Fta4 of Sim4 subunit, or CENP-50
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.8   6.6   5.7e-49   5.1e-45       1     199 [.       7     228 ..       7     229 .. 0.91

  Alignments for each domain:
  == domain 1  score: 153.8 bits;  conditional E-value: 5.7e-49
        FTA4   1 tilelKqsfldtqvriLsqPLapsrewrsaneeeeendeelsekavddvLaklNhrlkqhnrrvyspqairhvaeQidklYlea........edeklei 91 
                 t +elK +fl++q++iLs+PL+p+ ++ ++ + +e+    l++k +d++L++lN+rlk+hn+ +y ++a+rhvaeQ+d+l +++          +++++
  KHJ34343.1   7 TLIELKAEFLRQQIHILSEPLRPTADFYATRRFRESP---LEKKTIDKALNQLNKRLKRHNNLIYGRRAQRHVAEQVDRLSWDNasqnqyssGANETWT 102
                 6799***************************999987...****************************************9998888777654444444 PP

        FTA4  92 evnedltkeelIkeLPeswe......................veekeaeeepleallerYaelrarLielserrqqlqarlarlrklkallepflgsed 168
                 e ++d++   +I++L e+w+                       e+ + ++++ + l++rY++lr++L+el++rr  +q+rl++l++l+  l++f    d
  KHJ34343.1 103 EIGTDYCASVTIEKLTEEWPidisdnkieekeqdrsrvlgseAEAGSDDNQNNNLLNQRYTKLRSDLVELNTRRHVVQQRLEKLNSLRDILKFF----D 197
                 69*************************************9873333334444466779************************************....8 PP

        FTA4 169 pqesvqenlvtrdgeleaElermRvLlarva 199
                 + +++q+nlvtr g le+Elerm  L+ rv+
  KHJ34343.1 198 NPMDIQSNLVTRGGGLEQELERMCRLMLRVE 228
                 89***************************98 PP

>> Med9  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.1   0.00027       2.5       7      42 ..      33      67 ..      31      84 .. 0.83
   2 ?    5.2   1.0    0.0026        23      26      64 ..     153     191 ..     145     194 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00027
        Med9  7 ydilksiekdpnlsskdletktgelrhkLkkareli 42
                +++ + +++ p l+ k ++++++ l+++Lk+  +li
  KHJ34343.1 33 FYATRRFRESP-LEKKTIDKALNQLNKRLKRHNNLI 67
                67778889999.*****************9866655 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0026
        Med9  26 tktgelrhkLkkarelirelpgidrsveeqeaeieelee 64 
                 ++ + l++++ k r+ + el    + v+++++++++l++
  KHJ34343.1 153 QNNNLLNQRYTKLRSDLVELNTRRHVVQQRLEKLNSLRD 191
                 566889*******************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1274  (0.0710581); expected 358.6 (0.02)
Passed bias filter:                      590  (0.0329076); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 1979.86
//
Query:       KHJ34344.1  [L=646]
Description: hypothetical protein EV44_g2794 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-05   25.0   6.0      2e-05   24.3   6.0    1.4  1  ZZ             Zinc finger, ZZ type
    0.00093   19.0  13.0    0.00093   19.0  13.0    1.8  2  BSP_II         Bone sialoprotein II (BSP-II)
  ------ inclusion threshold ------
      0.019   15.3   5.9      0.041   14.2   5.9    1.6  1  C1_2           C1 domain
      0.049   13.5   0.0       0.11   12.4   0.0    1.6  1  EF-hand_8      EF-hand domain pair
       0.15   12.2  13.1      0.054   13.6   9.5    2.1  2  DUF2052        Coiled-coil domain containing protein (DUF2052
       0.18   10.0   7.8       0.27    9.5   7.8    1.3  1  CDC45          CDC45-like protein
        0.3   11.1   4.6       0.11   12.5   1.7    1.8  2  Baculo_IE-1    Baculovirus immediate-early protein (IE-0)
       0.91    8.9  12.8        1.6    8.1  12.8    1.3  1  CobT           Cobalamin biosynthesis protein CobT
        1.7    6.6  20.9        3.4    5.7  20.9    1.4  1  DNA_pol_phi    DNA polymerase phi
        3.1    8.1  18.3       0.11   12.8  11.8    1.9  2  PTPRCAP        Protein tyrosine phosphatase receptor type C-a
        4.4    7.0  13.1         14    5.4  13.1    1.8  1  DUF4637        Domain of unknown function (DUF4637)


Domain annotation for each model (and alignments):
>> ZZ  Zinc finger, ZZ type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.3   6.0   1.3e-08     2e-05       2      44 ..       7      51 ..       6      52 .. 0.83

  Alignments for each domain:
  == domain 1  score: 24.3 bits;  conditional E-value: 1.3e-08
                SS-EE-TTT-S...EESSEEEESSSSS-EE-HHHHHH..H---SS CS
          ZZ  2 hkkytCdgCseap.ligvRyhclrcsdYDLCqsCfst.hkagkhk 44
                ++ +tC+gC+ +  + ++R  c +c d++LC++C+     +++hk
  KHJ34344.1  7 KDLFTCNGCGDDIgSERARILCNICVDFNLCSNCYVLnYASKTHK 51
                5679******9743789******************8866667776 PP

>> BSP_II  Bone sialoprotein II (BSP-II)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0  13.0   5.7e-07   0.00093     127     217 ..     356     441 ..     263     477 .. 0.60
   2 ?   -4.1   0.1       6.2     1e+04     204     222 ..     502     520 ..     486     536 .. 0.46

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 5.7e-07
      BSP_II 127 eekatkeeesdeeeeeeeeeeneeeeaevdeneqgvngtstnsteaengngssggdngeeeeeesvteaeaegteveeeeeagsaetttsp 217
                 +++ +++ee++eeeeeeeeee+eeee++ d      n+ +++s+e+en+n + + +n    +e    + ++egt++e+ + ++s++   +p
  KHJ34344.1 356 NNQVQDQEEEEEEEEEEEEEEEEEEEEDSDISILIPNSKENESSESENENHQLN-EN----QELILLNIDKEGTKSESSNINTSENEPLTP 441
                 444444555544444444444444444444444444555555555555555444.33....333333444444444444444444333333 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 6.2
      BSP_II 204 eeeeagsaetttspnglfe 222
                 +++e++s++ t ++++ ++
  KHJ34344.1 502 NNSENESMSPTFVKKSELT 520
                 2223333333333333333 PP

>> C1_2  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   5.9   2.5e-05     0.041      13      46 ..       4      40 ..       2      41 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.5e-05
        C1_2 13 edssesfnCsaCgrkidgff..YsCseC.dfslhvrC 46
                +++++ f+C++Cg +i +++    C++C df+l+++C
  KHJ34344.1  4 STDKDLFTCNGCGDDIGSERarILCNICvDFNLCSNC 40
                678999*********7666678******9******** PP

>> EF-hand_8  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   6.6e-05      0.11      29      54 ..     199     224 ..     198     225 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.6e-05
   EF-hand_8  29 dilfrefDtdgdGkisfeEFcvller 54 
                  ++f+++D++g G+++ eEF ++le 
  KHJ34344.1 199 SSIFNTLDEKGTGYLKPEEFSFFLEI 224
                 589*******************9985 PP

>> DUF2052  Coiled-coil domain containing protein (DUF2052)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   9.5   3.3e-05     0.054      75     126 ..     360     411 ..     315     448 .. 0.52
   2 ?   -1.9   0.1       1.9   3.1e+03      54     138 ..     506     518 ..     463     556 .. 0.56

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.3e-05
     DUF2052  75 eaqqeeleeeeeeeeeeeeeeeeeeeeeeedekekaea.......deedeeeeeek..eek 126
                 + q+ee  eeeeeeeeeeeeeeeee+++                 +e++e+e+e++  +e+
  KHJ34344.1 360 QDQEEE--EEEEEEEEEEEEEEEEEDSDIS-------IlipnskeNESSESENENHqlNEN 411
                 222222..1222222222221222222211.......122222111111111111112111 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.9
     DUF2052  54 eeslseiLlrreeeaaaaerleaqqeeleeeeeeeeeeeeeeeeeeeeeeedekekaeadeedeeeeeekeekeeeeekeeeaea 138
                 +es+s +++++                                                                         +
  KHJ34344.1 506 NESMSPTFVKKS------------------------------------------------------------------------E 518
                 111111111111........................................................................1 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   7.8   0.00017      0.27     134     183 ..     360     411 ..     333     545 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00017
       CDC45 134 eedeeeeeeddddeeeeeeeeedeedeeedeeeskkkrksksdeeee..sdd 183
                 +++eeeeee++++eeeeeeeee+++d +    +sk++++s+s++e++  +++
  KHJ34344.1 360 QDQEEEEEEEEEEEEEEEEEEEEDSDISILIPNSKENESSESENENHqlNEN 411
                 1221122222222222222222222222222222222222222222222111 PP

>> Baculo_IE-1  Baculovirus immediate-early protein (IE-0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.7   6.7e-05      0.11      76     112 ..       5      42 ..       1      70 [. 0.83
   2 ?   -3.0   0.1       3.8   6.2e+03      33      61 ..     553     581 ..     547     590 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 6.7e-05
  Baculo_IE-1  76 lekklyqcnicedts.aeerflkPneccGykicnlcya 112
                  ++k l+ cn c d   +e   +  n c  +++c  cy+
   KHJ34344.1   5 TDKDLFTCNGCGDDIgSERARILCNICVDFNLCSNCYV 42 
                  7899*******876516667899**************7 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.8
  Baculo_IE-1  33 ndycckklvkklkaaldelleesekslev 61 
                  +d  c+ +v+ +++++d    +s++ l+ 
   KHJ34344.1 553 QDNSCEPTVNLNTKIIDPKNMKSSRLLQN 581
                  58889999999999999888888777765 PP

>> CobT  Cobalamin biosynthesis protein CobT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1  12.8   0.00098       1.6     197     251 ..     349     410 ..     329     437 .. 0.53

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00098
        CobT 197 lLqdldlaeesaeepeeedeeeeedeeeeeeeseee.......eeegedddkeeqeeaasee 251
                 +L    + ++ ++++eee+eeeee+eeeeeee+e++       ++++++++++e+e+ + +e
  KHJ34344.1 349 VLPIFPMNNQVQDQEEEEEEEEEEEEEEEEEEEEDSdisilipNSKENESSESENENHQLNE 410
                 55555566555555555555555444444444444456666652222222222222222222 PP

>> DNA_pol_phi  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7  20.9    0.0021       3.4     638     687 ..     360     412 ..     350     439 .. 0.38

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0021
  DNA_pol_phi 638 fedededeeddeeeeeeddeededseeddde.......eesdedeededdedvdeid 687
                   ++e+e+ee++eeeeee++ee+eds+            +e+++ e+++++ + +e++
   KHJ34344.1 360 QDQEEEEEEEEEEEEEEEEEEEEDSD----IsilipnsKENESSESENENHQLNENQ 412
                  22222222222222222222222222....234543322222222222333333322 PP

>> PTPRCAP  Protein tyrosine phosphatase receptor type C-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8  11.8   6.6e-05      0.11      35     104 ..     360     429 ..     331     452 .. 0.57
   2 ?   -3.6   0.4       7.7   1.3e+04      81      97 ..     511     527 ..     488     539 .. 0.36

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6.6e-05
     PTPRCAP  35 raraedgeedeeeEdqedeedeeedsed.leggeeeaesqeeeqaeseeageeqalekaeeakdeekaske 104
                 + + e++ee+eeeE++e+ee+ee+++ + l  + +e+es  e+++e+++ +e+q l   + +k++ k++++
  KHJ34344.1 360 QDQEEEEEEEEEEEEEEEEEEEEDSDISiLIPNSKENES-SESENENHQLNENQELILLNIDKEGTKSESS 429
                 444444444444444444444444443313444454544.5555556666666665544444444444433 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 7.7
     PTPRCAP  81 eeageeqalekaeeakd 97 
                     ++  l+ ++e+k+
  KHJ34344.1 511 PTFVKKSELTLTGEDKK 527
                 11111222222222222 PP

>> DUF4637  Domain of unknown function (DUF4637)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4  13.1    0.0085        14      15      55 ..     362     407 ..     352     452 .. 0.50

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0085
     DUF4637  15 reveeeeaeeeseeedeeedraeees.....aaegeeesreaeeae 55 
                 +e+eeee+eee+eee+eee++ ++ s     ++e+e+++ e e+++
  KHJ34344.1 362 QEEEEEEEEEEEEEEEEEEEEDSDISilipnSKENESSESENENHQ 407
                 2222222222222222222222222200000233333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (646 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2013  (0.112276); expected 358.6 (0.02)
Passed bias filter:                      779  (0.0434492); expected 358.6 (0.02)
Passed Vit filter:                       162  (0.00903564); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.82u 0.31s 00:00:01.12 Elapsed: 00:00:00.45
# Mc/sec: 4329.35
//
Query:       KHJ34345.1  [L=452]
Description: putative omega-3 fatty acid desaturase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.6e-23   83.2  18.4      4e-23   82.6  18.4    1.3  1  FA_desaturase  Fatty acid desaturase
    0.00046   20.4   0.0     0.0011   19.2   0.0    1.6  1  DUF3474        Domain of unknown function (DUF3474)


Domain annotation for each model (and alignments):
>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.6  18.4   4.5e-27     4e-23       2     249 ..      74     356 ..      71     361 .. 0.79

  Alignments for each domain:
  == domain 1  score: 82.6 bits;  conditional E-value: 4.5e-27
  FA_desaturase   2 swlalllalllglf.llgitgslaHeaaHgalfkkrklnrwlndllgallglplgisysawrisHlrHHaytngpdeDpdlaplal.......... 86 
                    +w a+   +l g++ +++  ++laHe++Hga++k+++ln+ l  l+      +l++++++wr sH +HH+ t++ ++D+ + p +           
     KHJ34345.1  74 AWSAYT--VLQGFVfTGI--WILAHECGHGAFSKSKNLNWTL-GLI---MHSFLLVPFHSWRLSHAQHHKATGNIERDTAFVPKLRdewikeklgt 161
                    466777..9999994444..5************998888888.444...799999**********99****9**********9999********** PP

  FA_desaturase  87 ...............srfeglfryllrlllgllvlg.wllalvlgl.....wlrrlarrrapsksrrrk..wrllawlllllawlglwlalllllg 159
                                   s+ ++l++ ++  l+g  ++  ++l+ +++      ++  +   ++++++++     ++l    +++ +++l++a  l+++
     KHJ34345.1 162 kasenlielaelaedSPISALWHDIVHQLFGWPGYLlFNLTGQKYGgakglRISHFYFGKDSVFYKENElgLIILSDIGVAIMIAALVIAGQLFGS 257
                    ***********************9888888888888877777666633332444444444444444444663444444444444555555555555 PP

  FA_desaturase 160 lall.lwlvplllllfllalvlnyveHyg........gdwgerqvetsasirsaswllnlltgnln.yHieHHlfPgvpwyrLpelhrrlrellpe 245
                    + +  lw+vp+l ++ +++ + ++++H+           w   +++t +  r+ + + + l++++   H+ HHl  ++p+y+  e++  +r+++++
     KHJ34345.1 258 WNVIiLWFVPWLWVNNWIVAI-TFLQHTDatmphysnSTWNFARGATATIDRDLGFIDTHLFHDIIgTHVCHHLVSTIPFYHAGEASVHIRRVMGK 352
                    555589****99999999999.999999999999988778777777777777*********999877***************************** PP

  FA_desaturase 246 hglp 249
                    h+ +
     KHJ34345.1 353 HYKS 356
                    9876 PP

>> DUF3474  Domain of unknown function (DUF3474)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   1.2e-07    0.0011      96     127 ..      17      48 ..       4      58 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 1.2e-07
     DUF3474  96 PPfkLadiraaiPkhCWvkdpWrsmsyvvrDv 127
                   f++ +i  aiP hC+     rs++yv+rD 
  KHJ34345.1  17 SSFTMKEIYDAIPPHCFKPSTIRSVAYVIRDY 48 
                 579999*************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3513.89
//
Query:       KHJ34346.1  [L=531]
Description: hypothetical protein EV44_g3284 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-08   33.5   0.0    5.7e-08   32.7   0.0    1.3  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   0.0   3.2e-12   5.7e-08      61     228 ..     149     318 ..     137     326 .. 0.87

  Alignments for each domain:
  == domain 1  score: 32.7 bits;  conditional E-value: 3.2e-12
       RVT_2  61 dsvrLllalaaeeelvvhqldvdsafLna..eldeevyvkqPpGfeidreeekvykLnkslyGlkqapllWneki.dkvLkklgferseaesGlyvrgt 156
                 +s rL+ +la  +++ ++  d++ a+ ++  +l  + yv++    e d   + + k+ + lyG+  a++ W+++  ++ L+kl+++ s+    l + + 
  KHJ34346.1 149 KSQRLIPSLAIYKNFDIFTRDISQAYTQSksQLLRDFYVRPS--TELDLPTNTILKVLRPLYGVPEAGTHWFHTYhNHRLQKLNLKSSSYDPCLMFNS- 244
                 6789**********************9762167788999865..5677779********************98762568***************9998. PP

       RVT_2 157 gegklivalyvddlliagsdikiledvkkelakkfklkdlgkvsk.....fLGieiaqeaggiklsladyiakvvkk 228
                    + iv+l  dd + a +++  l++  + l+ kf  k +  + +     f G  i ++  +i +sl+d iak+++ 
  KHJ34346.1 245 ---EAIVGLQTDDTITACTHSFKLKEEDELLKVKFGAKPVQILTQnrpliFNGALISKSDTTIIVSLHDQIAKIAQV 318
                 ...78******************************99987766543444488999999999************9874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3667.29
//
Query:       KHJ34347.1  [L=1166]
Description: putative iq and hect domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-85  287.1   0.0    3.6e-85  286.2   0.0    1.4  1  HECT      HECT-domain (ubiquitin-transferase)
    3.9e-05   23.1   0.5    0.00014   21.3   0.5    2.1  1  IQ        IQ calmodulin-binding motif
  ------ inclusion threshold ------
      0.098   12.8   1.2       0.23   11.6   1.2    1.5  1  MRP-L28   Mitochondrial ribosomal protein L28
       0.22   12.4   1.2       0.61   11.0   1.2    1.7  1  Alb1      Alb1


Domain annotation for each model (and alignments):
>> HECT  HECT-domain (ubiquitin-transferase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  286.2   0.0   7.9e-89   3.6e-85      11     307 .]     840    1166 .]     829    1166 .] 0.92

  Alignments for each domain:
  == domain 1  score: 286.2 bits;  conditional E-value: 7.9e-89
                  GGSSEEESSTTSSSEEE-TTHHHHS..........................HHHHHHHHHHHHHTT--BSS-B-HHHHHHHTT...-.---TCHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxx......................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxx RF
        HECT   11 klglfeeesedsgtlypkpssseee......................llklfeflGkvlGkaiyeeilldlpfsraflkfllg...eekitledlee 82  
                  + ++f   ++d++ lyp+p++ +ee                      ll++feflG+++Gk++ye+il+d+ f+++fl ++     +++++++d+++
  KHJ34347.1  840 SPRFF--VTNDQNLLYPNPTALDEErenlrqegylessqywkdrikdLLQQFEFLGRIIGKCLYEGILIDIGFASFFLLKWAAsglTYRVNINDIRD 934 
                  33555..47899999999998666699999999999999********889*******************************99999889******** PP

                  H-HHHHHHHHHHH..HS-GGG...GT-BSEEEEETTEEE......EEESSTTGGGSB--TTTHHHHHHHHHHHHHTGGGHHHHHHHHHHHHTTS-HH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT   83 idpelakslkellslesnteevedlaLtFtipenagasa......tieLipnGanipVtnenkkeYiklyvnyllkksvekqleaflkGfsevipsk 173 
                  +d++l++ l +l+++  n  +ve+l+L+Fti+ ++ +++      t +LipnG+ +pVtnen+ +Y++ +++++l+ +  +q++af kG+s+vi+  
  KHJ34347.1  935 LDEKLYEGLLQLKNY--NG-NVESLSLDFTITDTFSDKNgqtiaiTRDLIPNGSAVPVTNENRPLYVSYIARHRLQVQPYQQTQAFIKGLSDVINPA 1028
                  *************66..44.39**********8764444456688999************************************************* PP

                  HHTTS-HHHHHHHHBCSSS.--HHHHHHTEEEETT--.....TTSHHHHHHHHHHHHS-HHHHHHHHHHHHSSSS--TTCGGG-B--EEEEE-S..- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT  174 alklfdaeelellisGedelidvedlrrnteykggyn.....aesetiewlweilkefspeekrlfLqFvTgssrlPlgGfaelhpkftierksked 265 
                  ++++f+ +el+ lisG++  id+edl+rnt y+g y+     +e+eti+ +w+++k ++++++r+ L+F+T+s+r+Pl Gf++l+p f i+ ++  d
  KHJ34347.1 1029 WISMFNRSELQILISGDSSEIDLEDLQRNTIYSGVYQigddgEEHETIKFFWNVMKALDDSDRRKVLKFITSSPRAPLLGFSKLNPLFSIRDSG-GD 1124
                  ******************99****************977777888**********************************************977.9* PP

                  TTS--EEEGGGTEEEE---SSHHHHHHHHHHHHHHHH--XXX CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        HECT  266 etrLPtahTCfnlLklpdYsskeilkekLltAieetegFels 307 
                  ++rLP+ +TC+nlLklp+Yss++il++kLl+A+++++gF+ls
  KHJ34347.1 1125 DDRLPSTSTCVNLLKLPRYSSENILRQKLLYAVNSGAGFDLS 1166
                  ****************************************96 PP

>> IQ  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.5   3.1e-08   0.00014       2      19 ..      53      70 ..      52      72 .. 0.92

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 3.1e-08
                HHHHHHHHHHHHHHHHHH CS
          IQ  2 kaaikIQaawRGylaRkr 19
                 aa++IQ+ wRGy+ R++
  KHJ34347.1 53 NAATLIQRIWRGYKSRQK 70
                69**************98 PP

>> MRP-L28  Mitochondrial ribosomal protein L28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.2   5.1e-05      0.23      33      95 ..      13      74 ..       7      85 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 5.1e-05
                XXXXXXXXXXXXXXSXSXXTTSSTTX..XSXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHH CS
     MRP-L28 33 rkleksakelkPveelivplksvdsakrrqrkllelskeelerrallekqwaryrqqekekde 95
                r+ + s ++l+P +  + + + + +a +++r++ +l ++ l+   l+++ w+ y+  +k+++ 
  KHJ34347.1 13 RQVNLSGQNLNPFATATGTRQTIVHA-QQERQQRKLERARLNAATLIQRIWRGYKSRQKLSEA 74
                677778899****9999888888777.799999999******************999998764 PP

>> Alb1  Alb1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.2   0.00014      0.61      41     101 ..      22      82 ..       6      84 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00014
        Alb1  41 lsagiskkkkkkkklskklrlrqekgleraeavterlekKieks.israkyvqeRkagwDei 101
                 l+  ++  ++ ++++ ++++ rq+++lera  +  +l + i +  +sr k  ++R+++wD++
  KHJ34347.1  22 LNPFATA-TGTRQTIVHAQQERQQRKLERARLNAATLIQRIWRGyKSRQKLSEARREEWDNL 82 
                 5555555.777889999************************9862667999999******86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1166 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       652  (0.0363657); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.79u 0.27s 00:00:01.06 Elapsed: 00:00:00.46
# Mc/sec: 7643.61
//
Query:       KHJ34348.1  [L=273]
Description: putative nicotinamide n-methyltransferase nnt1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.5e-16   58.6   0.0    9.7e-16   58.0   0.0    1.2  1  Methyltransf_16  Lysine methyltransferase
     0.0024   17.2   0.0     0.0039   16.5   0.0    1.4  1  GidB             rRNA small subunit methyltransferase G
  ------ inclusion threshold ------
      0.016   14.6   0.0      0.024   14.0   0.0    1.2  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
       0.04   13.5   0.0      0.084   12.4   0.0    1.4  1  MTS              Methyltransferase small domain
      0.046   14.4   0.1       0.43   11.3   0.1    2.1  1  Methyltransf_25  Methyltransferase domain
       0.15   11.8   0.0       0.25   11.1   0.0    1.3  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl


Domain annotation for each model (and alignments):
>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.0   0.0   3.3e-19   9.7e-16      18     172 ..      57     226 ..      51     228 .. 0.80

  Alignments for each domain:
  == domain 1  score: 58.0 bits;  conditional E-value: 3.3e-19
  Methyltransf_16  18 grkvWdaavvlvkylekklakelganelsklsvlELGsGtGlvGlavaellpeakviltDlee..llellkknielnkn.........alkskv 100
                      g+++W+a+ v++ yle       + + + +++vlELG+G+Gl  l+ a l +   v++tD+++  l+e+lk+n+e  kn          lks+ 
       KHJ34348.1  57 GHHLWNAGRVTSSYLEA------HPEIVCGKKVLELGAGAGLPSLVCAYL-EAECVVITDYPDtaLIENLKSNVERVKNeintvrksnGLKSRL 143
                      89**************9......788999********************9.555699****997789********8887777878777899999 PP

  Methyltransf_16 101 kvevLdWgeeleedll.....ekeevDlilaaDcvYledslelLvkvLkellkkesk...vlvaykkr...reaekkFfklle 172
                      +v+   Wge+ ++ l      +++ +D+ + aD++++++   +L+ ++++ lkk+ +   +++    r    e++  Ff+ ++
       KHJ34348.1 144 VVQGHCWGEDCQSILShitdeKNSGFDVLILADLLFNHSEHRKLLVTVQRTLKKQEDakaLVFFTPYRpwlLEKDLMFFEIVK 226
                      *********98543321111134569******************999999998877666533333344455567777776665 PP

>> GidB  rRNA small subunit methyltransferase G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.3e-06    0.0039      29      75 ..      54     106 ..      37     141 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.3e-06
                 HHHHHCHHHHHHHGGCS-CCC-.......EEEETSTTTTTHHHHHHH-TTSEE CS
        GidB  29 ellerhlldslsvlellkekrd......kviDvGsGaGlPGipLaiarpelkl 75 
                  l+ +hl+++  v + + e++       kv+ +G+GaGlP+++ a + +e  +
  KHJ34348.1  54 PLWGHHLWNAGRVTSSYLEAHPeivcgkKVLELGAGAGLPSLVCAYLEAECVV 106
                 5899*****98887766665554666645**************9999888764 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   8.2e-06     0.024     162     215 ..      80     132 ..      65     148 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 8.2e-06
        PrmA 162 geevlDvGtGSGiLaiaaakLgakkvvavDiDevA.vkvakeNaelNkveaklev 215
                 g++vl +G+G+G+ +++ a L+a+ vv +D+ + A ++  k+N+e+  v++++++
  KHJ34348.1  80 GKKVLELGAGAGLPSLVCAYLEAECVVITDYPDTAlIENLKSNVER--VKNEINT 132
                 789****************************988824555556553..4444433 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   2.8e-05     0.084      31      89 ..      79     138 ..      60     143 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.8e-05
                 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHH.HHHHHHHHHHTTGC.EEEEE-ST CS
         MTS  31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarA.lesakenleankle.vevvasdv 89 
                   +kvl lG+GaG+ ++++a  + e  v+++d    A +e  k n+e+ k e  +v++s++
  KHJ34348.1  79 CGKKVLELGAGAGLPSLVCAYLEAE-CVVITDYPDTAlIENLKSNVERVKNEiNTVRKSNG 138
                 6789*****************9998.58899986666379999999999999445555665 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00014      0.43       1      95 [.      83     197 ..      83     198 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00014
                      EEEET-TTSHHHHHHHCTSTSSEEEEEES.SHHHHHHHHHHHHH...........TTTTEEEEE......SBCCGBS.....SSTTTEEEEEEE CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDi.seemleaareraee...........eglnvefvq......gdaedlp.....fedgsfDlvvss 71 
                      vL+lG+G G  +l +a   +++ v+ +D+ + +++e+ ++++e+           +gl+ ++v+       d++++      ++++ fD+ +++
       KHJ34348.1  83 VLELGAGAGLPSLVCAYL-EAECVVITDYpDTALIENLKSNVERvkneintvrksNGLKSRLVVqghcwgEDCQSILshitdEKNSGFDVLILA 175
                      8********999999977.7899999**945566788888887765555445444444444433222233444442123333577789999997 PP

                      ST.GGGSSHHHHHHHHHHHHHHEEE CS
  Methyltransf_25  72 ga.lhhlsdedlekalkeiarvLkp 95 
                         ++h   ++++k+l  + r Lk+
       KHJ34348.1 176 DLlFNH---SEHRKLLVTVQRTLKK 197
                      664444...5678888888888886 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   8.3e-05      0.25      71     133 ..      77     138 ..      64     142 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.3e-05
                 --TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHHHHHHCTTCSEEEEES-G CS
        PCMT  71 lkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldlenvivvvgDG 133
                 +  g++vLe+G+G+G  + v a ++++++ v++      l+e+ k n+++ + e  +v+ + G
  KHJ34348.1  77 IVCGKKVLELGAGAGLPSLVCA-YLEAECVVITDYPDTALIENLKSNVERVKNEINTVRKSNG 138
                 7889***********9988776.6789996666555678999999999998887656666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (273 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 1984.80
//
Query:       KHJ34349.1  [L=223]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0023   18.0   0.4     0.0036   17.4   0.4    1.3  1  ArfGap          Putative GTPase activating protein for Arf
  ------ inclusion threshold ------
        1.1    9.2   5.1        2.5    8.1   5.1    1.5  1  OrfB_Zn_ribbon  Putative transposase DNA-binding domain
        1.4    8.7   4.7        2.7    7.7   4.7    1.5  1  DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
        1.8    8.1   6.4         12    5.5   1.5    2.6  2  zf-ribbon_3     zinc-ribbon domain
        2.5    8.3   9.4        8.9    6.6   1.2    2.4  2  zf-CCHC         Zinc knuckle


Domain annotation for each model (and alignments):
>> ArfGap  Putative GTPase activating protein for Arf
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.4     1e-06    0.0036      15      92 ..     110     185 ..     100     207 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1e-06
                 B-TTT-SBS--EEETTTTEEE-HHHHHHHCCS.TTT--EEETTTS---HHHHHHHHHTCHHHHHHHHTTTC-TTTSG- CS
      ArfGap  15 vCaDCgakeptWaslnlgvflCieCsgvHrslgvhiskvrsltldkwedeelellkalgNkkaneileaklpkeekrs 92 
                  C +Cg+++ t   l  +++ C +C g Hrs  +h    r ++    ++e++++++++g+++ +++l ak  +e+   
  KHJ34349.1 110 SCGNCGSTNHTED-LCTAATKCRNCGGPHRSD-SHRFLARPTRSGAPTKEQMKTFRQVGEREYQAVLRAKAAEESAAA 185
                 6999998887754.4456678**********8.8999*********************************98777663 PP

>> OrfB_Zn_ribbon  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.1    0.0007       2.5      30      59 ..     110     140 ..     108     144 .. 0.91

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0007
  OrfB_Zn_ribbon  30 tCseCgsknke.alsgrtfkCpnCgfeadrD 59 
                     +C +Cgs+n + +l +   kC+nCg  +  D
      KHJ34349.1 110 SCGNCGSTNHTeDLCTAATKCRNCGGPHRSD 140
                     6*********99*************988777 PP

>> DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   4.7   0.00077       2.7       3      24 ..     111     134 ..     110     139 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00077
                     -SSS--B--..--SSS----SSS- CS
  DNA_RNApol_7kD   3 CgeCgaevs..lkkgdpiRCkeCG 24 
                     Cg+Cg+ +   +  +++ +C++CG
      KHJ34349.1 111 CGNCGSTNHteDLCTAATKCRNCG 134
                     *****9987446679********9 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.2    0.0081        29      16      24 ..     108     116 ..     106     122 .. 0.78
   2 ?    5.5   1.5    0.0033        12      16      25 ..     127     136 ..     123     136 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0081
  zf-ribbon_3  16 dnvCpyCGt 24 
                  ++ C +CG+
   KHJ34349.1 108 APSCGNCGS 116
                  567888885 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0033
  zf-ribbon_3  16 dnvCpyCGtk 25 
                  +++C +CG++
   KHJ34349.1 127 ATKCRNCGGP 136
                  799*****86 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   1.2    0.0025       8.9       2      12 ..     110     120 ..     109     125 .. 0.83
   2 ?    5.9   1.6     0.004        14       2       9 ..     129     136 ..     129     136 .. 0.89

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0025
                 CTSSSSSSSST CS
     zf-CCHC   2 kCynCGepGHi 12 
                  C nCG++ H 
  KHJ34349.1 110 SCGNCGSTNHT 120
                 699*******6 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.004
                 CTSSSSSS CS
     zf-CCHC   2 kCynCGep 9  
                 kC+nCG+p
  KHJ34349.1 129 KCRNCGGP 136
                 7*****86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       687  (0.0383178); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1644.90
//
Query:       KHJ34350.1  [L=650]
Description: putative component of the rsc chromatin remodeling complex [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-52  177.0   0.0    3.8e-52  176.3   0.0    1.3  1  CRC_subunit  Chromatin remodelling complex Rsc7/Swp82 subunit


Domain annotation for each model (and alignments):
>> CRC_subunit  Chromatin remodelling complex Rsc7/Swp82 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.3   0.0   2.1e-56   3.8e-52       3     135 .]     157     288 ..     155     288 .. 0.98

  Alignments for each domain:
  == domain 1  score: 176.3 bits;  conditional E-value: 2.1e-56
  CRC_subunit   3 deykltkedpegekkidknGkLlggreyrvktFtleeregkklyvLstdlarllgfrdsylffkknpqllkllatqeekedLiergllpsslksrqik 100
                  dey  +++d++g+kk++ nG+L ggrey+++tF ++er g+kl++L+t++ar+lg+rdsyl+f+kn++l+k++a+q ekedLi++++lp+s++srqi+
   KHJ34350.1 157 DEYIPRETDEAGDKKVNPNGQLNGGREYKCRTFLVPER-GDKLFMLATECARVLGYRDSYLLFNKNRSLFKIIASQIEKEDLIRQEVLPYSYRSRQIA 253
                  7899999*****************************99.*********************************************************** PP

  CRC_subunit 101 lvtarsvFlefGariivkGkrvvDDYyeekakeqg 135
                  +vtars+F++fG+r+i +G+rv DDY+e+ka++qg
   KHJ34350.1 254 IVTARSMFRQFGSRVIRNGRRVRDDYWESKARKQG 288
                  *********************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (650 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       758  (0.0422779); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 4430.55
//
Query:       KHJ34351.1  [L=716]
Description: putative fungal specific transcription factor domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (716 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       745  (0.0415528); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.40
# Mc/sec: 5367.38
//
Query:       KHJ34352.1  [L=327]
Description: putative vacuolar iron transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-65  219.1   1.7    7.5e-65  218.8   1.7    1.1  1  VIT1      VIT family


Domain annotation for each model (and alignments):
>> VIT1  VIT family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.8   1.7   4.2e-69   7.5e-65       1     215 []      97     314 ..      97     314 .. 0.94

  Alignments for each domain:
  == domain 1  score: 218.8 bits;  conditional E-value: 4.2e-69
        VIT1   1 lrdavlGanDGLvspfalvaGlsaaslgssktvllaGlaellAGaiSMgiGeYlsvkserdlekaerkreeeeleedpeegeaeelaeilearglseel 99 
                 ++da++G++DGL++pfal+aGls  ++g++++v+++Glael AGaiSMg+G+Yl+++se ++++a+r+++e++l++++ e   +++aei++++++++++
  KHJ34352.1  97 ISDATIGLSDGLTVPFALTAGLS--AIGNTDVVIYGGLAELTAGAISMGLGGYLAATSEAASYRAQREKTENSLAANS-EFFIQDIAEIFRPYNIPKQT 192
                 589********************..6779************************************************9.55569*************** PP

        VIT1 100 aqevaaellknpdallelmlreelgpsaseelasplkaAlssalsfliGgliPllpylfvesvglalvvsiavtllalllfGavkallt.......gss 191
                  ++++++l+++p+  +++++++++  ++   + +++ +A+++al++++Gg++Pl+py+fv+ v+ al++si+++++al++fG+vk+ +        +++
  KHJ34352.1 193 INDLIKHLTDSPRV-VDFVMQFKHCEEE-PPASRAFVSAITIALGYFMGGMLPLIPYFFVDRVNSALLWSIGLMIVALFAFGYVKTGIIegwrgdkNVR 289
                 *************9.9*****9986333.23357899**********************************************************9777 PP

        VIT1 192 k.lvsalrmlliGalAaaaayligk 215
                   l+++l+m+++G++Aaaaa++++k
  KHJ34352.1 290 ScLYRGLQMVVVGGAAAAAAMGFVK 314
                 78*******************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       773  (0.0431145); expected 358.6 (0.02)
Passed bias filter:                      595  (0.0331865); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2389.73
//
Query:       KHJ34353.1  [L=119]
Description: hypothetical protein EV44_g3406 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       544  (0.0303419); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.25s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 922.30
//
Query:       KHJ34354.1  [L=213]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.30s 00:00:00.72 Elapsed: 00:00:00.45
# Mc/sec: 1432.71
//
Query:       KHJ34355.1  [L=803]
Description: hypothetical protein EV44_g6182 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        9.4    6.2   9.0         18    5.3   0.6    3.5  3  Gemini_C4  Geminivirus C4 protein


Domain annotation for each model (and alignments):
>> Gemini_C4  Geminivirus C4 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.6     0.001        18      49      74 ..      23      48 ..      16      57 .. 0.84
   2 ?   -0.9   0.1     0.088   1.6e+03      15      53 ..      62     102 ..      49     108 .. 0.70
   3 ?    4.3   0.3    0.0021        38      42      57 ..     292     308 ..     282     314 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.001
   Gemini_C4 49 kptstrtetqsnGensrstvdlleev 74
                 + s++ e  s G ns st+d++++ 
  KHJ34355.1 23 DNESAQSEQTSLGANSNSTADIINND 48
                68899****************98754 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.088
   Gemini_C4  15 nssakikdsstWyPq.PG.qhisirtfrelnpaPtskptst 53 
                  s+ + +  s+Wy   P     si+  +e  +a t ++ s 
  KHJ34355.1  62 SSTQQPRPRSSWYGTwPRkSNTSIKLCKESIQAETGSNNSV 102
                 55666667788886524314579999999999999888775 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.0021
   Gemini_C4  42 lnpa.Ptskptstrtet 57 
                 ln++ Pt  +tst+te 
  KHJ34355.1 292 LNNVpPTVANTSTKTEG 308
                 67763699*******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (803 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       625  (0.0348597); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 5725.38
//
Query:       KHJ34356.1  [L=194]
Description: putative autophagy protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-36  126.3  18.3    2.6e-36  125.7  18.3    1.2  1  ATG16      Autophagy protein 16 (ATG16)
     0.0013   18.5  11.3      0.002   17.9  11.1    1.4  1  DUF4201    Domain of unknown function (DUF4201)
     0.0055   16.6   1.8      0.011   15.6   0.6    1.9  2  HrpE       HrpE/YscL/FliH and V-type ATPase subunit E
  ------ inclusion threshold ------
       0.17   11.3  11.3       0.19   11.1  11.3    1.1  1  Golgin_A5  Golgin subfamily A member 5
        1.1    7.8   6.9        1.3    7.6   6.9    1.2  1  FapA       Flagellar Assembly Protein A
        8.6    6.8  16.0         10    6.5   4.8    2.5  2  CCDC-167   Coiled-coil domain-containing protein 167


Domain annotation for each model (and alignments):
>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.7  18.3   8.8e-40   2.6e-36       1     200 []       7     189 ..       7     189 .. 0.86

  Alignments for each domain:
  == domain 1  score: 125.7 bits;  conditional E-value: 8.8e-40
       ATG16   1 eilaqLreRdarqekafa.....eliqaynrLldrtsaleaenaklekaaasakssksskksakekeasasqsnskqsakiqsleqklaqlreelaely 94 
                 e+l +L+e +++ + + +     +li+a++ Lld+tsalea++a  ++  +             ++e+++s       + i+  + + + lr+elae++
  KHJ34356.1   7 EYLDALKECEKK-KICSYaqiddKLIEAFTILLDQTSALEAQKALFRSTLN-------------QDESRNSG------TLIS--QRENLLLRSELAEAL 83 
                 688888888887.55554577779*********************933322.............22222222......2333..34444589******* PP

       ATG16  95 ksrgelaqrllelneelqkleeklkedeerlaeleaeraaletklkdreeelrekeklvqdlqDElsaLqlqlnqaEeklrklekENkeLveRWmkrka 193
                 +s+g+l+ r++ +  el+kl+ek k+d ++++e+ ++r +l++klkdr+eelr+k+kl++d+ DE+++L+lqln+ E+k ++l+ EN+ Lv+RWm+rk 
  KHJ34356.1  84 RSNGQLSLRIKLADVELAKLREKNKSDMNTIEEIFKDRLNLTQKLKDRDEELRGKTKLLDDVYDEIVSLNLQLNMSEQKIKDLKSENQFLVDRWMARKI 182
                 **************************************************************************************************8 PP

       ATG16 194 qeAekmN 200
                  e ek N
  KHJ34356.1 183 LEWEKTN 189
                 8877776 PP

>> DUF4201  Domain of unknown function (DUF4201)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9  11.1   6.8e-07     0.002      49     136 ..      84     171 ..      67     174 .. 0.94

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 6.8e-07
     DUF4201  49 ienqalnkkIeernkeLkrlkkkttktvhalthlkeklhmleselselkkelkekeerlaklrkelykvklerdklrkqneklkqqgg 136
                 + n +l+ +I   + eL +l++k ++++ +++++ + +  l+++l+++ +el+ k++ l+++ +e+ +++l+ +  +++ ++lk++++
  KHJ34356.1  84 RSNGQLSLRIKLADVELAKLREKNKSDMNTIEEIFKDRLNLTQKLKDRDEELRGKTKLLDDVYDEIVSLNLQLNMSEQKIKDLKSENQ 171
                 6799999999999***********************************************************************9876 PP

>> HrpE  HrpE/YscL/FliH and V-type ATPase subunit E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.6   3.8e-06     0.011      91     138 ..      22      69 ..       4      94 .. 0.84
   2 ?    0.6   0.1      0.15   4.4e+02      16      58 ..      69     111 ..      64     123 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 3.8e-06
        HrpE  91 lltaveqLLsdalarlLdetplaeRasALlRqLlksqqgearatLycH 138
                   +++++ L +a++ lLd+t+  e ++AL R  l++ +++  +tL   
  KHJ34356.1  22 SYAQIDDKLIEAFTILLDQTSALEAQKALFRSTLNQDESRNSGTLISQ 69 
                 468999**************************************9765 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.15
        HrpE  16 leeeilrreqlaeslrarellaeArlqAeqllaqarekaeell 58 
                 ++e++l r +lae lr++  l    + A+  la+ rek +  +
  KHJ34356.1  69 QRENLLLRSELAEALRSNGQLSLRIKLADVELAKLREKNKSDM 111
                 6788888899999999988887777777777777777766555 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1  11.3   6.5e-05      0.19      92     215 ..      45     171 ..       3     190 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 6.5e-05
   Golgin_A5  92 reqlqeleeqleeerkakeeveaelerlkee..lryleeelvrskatlqsrikdrekeieklrnqlttkslsss....seselesRlkqLtesLiqKQt 184
                 + q + ++++l+++++++      l +++e+  lr+   e  rs  +l  rik  + e+ klr++ ++  ++       + +l ++lk   e L  K  
  KHJ34356.1  45 EAQKALFRSTLNQDESRNS--G-TLISQRENllLRSELAEALRSNGQLSLRIKLADVELAKLREKNKSDMNTIEeifkDRLNLTQKLKDRDEELRGKTK 140
                 3333333444443333222..2.222333331157777899999*****************998766554332233446778999999*********** PP

   Golgin_A5 185 vlEalsteknslvlQLeRleqqikevqseae 215
                 +l+ +  e  sl lQL+  eq+ik+++se +
  KHJ34356.1 141 LLDDVYDEIVSLNLQLNMSEQKIKDLKSENQ 171
                 **************************99865 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   6.9   0.00042       1.3     327     411 ..      88     173 ..       9     187 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00042
        FapA 327 evgldepelkeklkeleeeleeleeeleklkkk.ikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeelesk 411
                 +++l+ + ++ +l++l+e+ ++  + +e++ k+ +++ +klk +++    k + l+ +  +  +l+ +l+  e+++k+lk+e +  
  KHJ34356.1  88 QLSLRIKLADVELAKLREKNKSDMNTIEEIFKDrLNLTQKLKDRDEELRGKTKLLDDVYDEIVSLNLQLNMSEQKIKDLKSENQFL 173
                 3344555778888999999999999999998888**********************************************998776 PP

>> CCDC-167  Coiled-coil domain-containing protein 167
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   4.8    0.0035        10       5      69 ..      40     111 ..      37     118 .. 0.87
   2 ?    5.5   3.9    0.0071        21       6      66 ..     114     171 ..     111     174 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0035
    CCDC-167   5 eIdkleeklascrerLeaverrlrkeelseee....Resle...eEeaslkeqleenekeLksLrkeNrksm 69 
                 + + le + a +r  L++ e+r  ++ +s+ e    R +l    +  ++l+ +++  + eL++Lr++N+  m
  KHJ34356.1  40 QTSALEAQKALFRSTLNQDESRNSGTLISQREnlllRSELAealRSNGQLSLRIKLADVELAKLREKNKSDM 111
                 5567999999*******************99999998888855556788*******************8776 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0071
    CCDC-167   6 IdkleeklascrerLeaverrlrkeelseeeResleeEeaslkeqleenekeLksLrkeNr 66 
                 I+++ +  +++ ++L++ + +lr+++      +++++E  sl+ ql+  e++ k L+ eN+
  KHJ34356.1 114 IEEIFKDRLNLTQKLKDRDEELRGKTKLL---DDVYDEIVSLNLQLNMSEQKIKDLKSENQ 171
                 55555666666666666666666654333...4788************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1362  (0.0759663); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 1417.66
//
Query:       KHJ34357.1  [L=834]
Description: putative et-dependent rrna methyltransferase spb-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.7e-86  287.3  20.8    6.7e-86  287.3  20.8    3.2  4  Spb1_C           Spb1 C-terminal domain
    7.6e-56  189.0   0.0    1.6e-55  188.0   0.0    1.6  1  FtsJ             FtsJ-like methyltransferase
    5.8e-49  166.1   7.6    5.8e-49  166.1   7.6    5.0  5  DUF3381          Domain of unknown function (DUF3381)
     0.0029   17.5   0.0      0.014   15.2   0.0    2.2  2  Methyltransf_23  Methyltransferase domain
  ------ inclusion threshold ------
          4    7.4   5.9       0.72    9.8   0.6    2.5  3  DUF3915          Protein of unknown function (DUF3915)


Domain annotation for each model (and alignments):
>> Spb1_C  Spb1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   1.5      0.38   1.4e+03     138     169 ..     360     387 ..     347     402 .. 0.58
   2 ?   -5.9   4.5         5   1.8e+04     145     169 ..     462     487 ..     445     529 .. 0.66
   3 ?   -2.7   0.7         1   3.7e+03      17      29 ..     519     531 ..     497     554 .. 0.46
   4 !  287.3  20.8   1.9e-89   6.7e-86       2     211 .]     622     831 ..     621     831 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.38
      Spb1_C 138 iaededlsekeKakqieklmkkaakkkkkkkv 169
                 + e + lsekeKa+  +   ++  +   kk++
  KHJ34357.1 360 LEELQSLSEKEKAQRKRERRREN-E---KKQK 387
                 55666777777776533322222.2...2222 PP

  == domain 2  score: -5.9 bits;  conditional E-value: 5
      Spb1_C 145 sekeKa.kqieklmkkaakkkkkkkv 169
                  e++K  ++++kl+++ +++k++ + 
  KHJ34357.1 462 DEQDKLdRELDKLYEQFQERKSQSNF 487
                 35555424677777777655333333 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1
      Spb1_C  17 eekdsddeeeeed 29 
                 +e++sd++++e+d
  KHJ34357.1 519 KEDSSDEDSDEDD 531
                 1111111122221 PP

  == domain 4  score: 287.3 bits;  conditional E-value: 1.9e-89
      Spb1_C   2 eeedddfevvpaeekeekdsddeeeeedekidiltaealalaqqlatgkktkedlidegfnryafndkdgLPeWFldDEkkhskpekpitkeavaaike 100
                 +eed+dfevv+++ +e++ +++ +++   +idi+taea++la+q+a+g+ktk+dlideg+n+ +f+d+dgLP+WFldDE+kh+kp++pi+ +a++aike
  KHJ34357.1 622 SEEDKDFEVVKKHVEETEWEEEPSKNGRLDIDIITAEAMTLAHQIASGEKTKYDLIDEGWNKNSFKDRDGLPDWFLDDESKHDKPHRPISAAAANAIKE 720
                 6899******8888777766666666666********************************************************************** PP

      Spb1_C 101 klralnarpiKKVaEAkaRKklkaakkleklkkkaeliaededlsekeKakqieklmkkaakkkkkkkvkvvvakkankglsgrpkgvkgkykmVDkrm 199
                 klralnarpiKKV+EAk RKk+kaa++lekl+kk++l++++e+++ekeKa++i klm+kaakkk+++kvk+vva+++n+g+sgrp+gvkgkyk+VD+r+
  KHJ34357.1 721 KLRALNARPIKKVREAKSRKKFKAAQRLEKLRKKSALLQDEEGMTEKEKAQSIVKLMSKAAKKKPRQKVKLVVARGGNRGISGRPRGVKGKYKIVDARL 819
                 *************************************************************************************************** PP

      Spb1_C 200 KkdlRalkriak 211
                 Kkd+Ra+kriak
  KHJ34357.1 820 KKDTRAEKRIAK 831
                 **********98 PP

>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.0   0.0   4.4e-59   1.6e-55       1     177 []      24     200 ..      24     200 .. 0.99

  Alignments for each domain:
  == domain 1  score: 188.0 bits;  conditional E-value: 4.4e-59
                 CCCCHHHHHHHHHHHHT-S-TT-EEEECT-TTSHHHHHHCCT.T.-SEEEEEESSSSHHHTTEEEECS-CCCSSHHHHHCHCHHHSSEEEEEE--S-SS CS
        FtsJ   1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealserkvdlvvsDgapdv 99 
                 yr+R+a+KL+++++k++++++ k  +Dl+aaPG+w+qv+++ + +++ +v+vDl p++ +p+v t+qgdit+ + + +ik +++  k+d v++Dgap+v
  KHJ34357.1  24 YRARAAFKLIQLNKKYGFLERSKVLLDLCAAPGSWCQVAAESMPTGSLIVGVDLSPIKAIPKVITFQGDITTDKCRATIKSYFKTWKADTVLHDGAPNV 122
                 9****************99************************999***************************************************** PP

                 -CHHHHHHHHHCCCCHHHHCCHCCCCECCCEEEECCCHCCCHHHHHHHHHCCEEEEEEEE-SS--CCG-EEEEEEEEC CS
        FtsJ 100 sgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvcrgf 177
                    +++d+++q++L+l+a++la++ l +ggtfv+k+fr+++ ++ll  ++++F+kv+ +kP+ssr+ s+e+f+vcrgf
  KHJ34357.1 123 GTAWVQDSFNQAELALQAMKLATDFLVEGGTFVTKVFRSKDYNSLLWVFNQLFNKVESTKPPSSRNVSAEIFVVCRGF 200
                 ****************************************************************************98 PP

>> DUF3381  Domain of unknown function (DUF3381)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  166.1   7.6   1.6e-52   5.8e-49       1     165 []     234     391 ..     234     391 .. 0.93
   2 ?    1.4   9.2     0.067   2.4e+02     109     162 ..     442     496 ..     419     500 .. 0.63
   3 ?   -1.9   0.9      0.73   2.6e+03     113     146 ..     516     548 ..     497     559 .. 0.50
   4 ?   -4.9   6.8         5   1.8e+04     108     144 ..     593     642 ..     571     649 .. 0.41
   5 ?   -3.0  10.1       1.5   5.5e+03      98     152 ..     731     788 ..     717     795 .. 0.47

  Alignments for each domain:
  == domain 1  score: 166.1 bits;  conditional E-value: 1.6e-52
                 XXXXXXXXXXXXXXXXXX--EEEHHHHHT-----HHHHH-SEEE--S....HHHHH.HHSSSSS-SSHHHHHH-SSS--HHHHHHHHHHHHHHHHH-XX CS
     DUF3381   1 pekkkrkreGYeegdytlykelsvseFiksedpielLgkaneitfdk....eelkekilkhpktteEikelckDLkVLGkkdlkkLLkWrkklrkelgl 95 
                 pe+kkrkr+GYeeg+yt++ke  vseFik++dpi++Lg++n+++f++    + + ++++++p+tt+Ei+++c DL+VLG+k++++LLkWr+k+r+++gl
  KHJ34357.1 234 PEVKKRKRDGYEEGNYTQFKEELVSEFIKTTDPIAMLGSLNRLSFEQpsngDIALAALDRLPETTKEIRDCCMDLRVLGRKEFRNLLKWRLKVREKFGL 332
                 689***********************************************9777888*****************************************9 PP

                 XX.................XXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3381  96 eekkekeekeeeeeedeeeeeeeeeeaeeeeldeeeeiekeleelkeeekkkkKrekkkankkkqkeiqr 165
                  + k+k  ++           + +e++ +e++dee +i +el++l+e+ek+++Kre++++n+kkqkei+r
  KHJ34357.1 333 VSAKSKVLAN-----------DGDEAVAVEPMDEELKILEELQSLSEKEKAQRKRERRRENEKKQKEIIR 391
                 9885555432...........34567899**************************************987 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.067
                 .......X.XXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3381 109 eedeee.e.eeeeeeaeeeeldeeeeiekeleelkeeekkkkKrekkkankkkqke 162
                  +de + e e  +++ +ee++de++++++el++l e+ +++k +   k + kk+++
  KHJ34357.1 442 GQDE-DiEnEIGSDSGTEESDDEQDKLDRELDKLYEQFQERKSQSNFKHRAKKARQ 496
                 1221.112233445566677789999999999999988777777766666666655 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.73
                 ..XXXXX..XXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3381 113 eeeeeeeeeaeeeeldeeeeiekeleelkeeekk 146
                 e+  +e+++ e++++d+ +  +  l +lk++ +k
  KHJ34357.1 516 EN-LKEDSSDEDSDEDDPKTQDPLLTNLKNDMAK 548
                 11.2222333333334444444455555555554 PP

  == domain 4  score: -4.9 bits;  conditional E-value: 5
                 ....................XXXXX..XXXXXX.XXXXXXXXXXXXXXXXX CS
     DUF3381 108 eeedee.............eeeeeeeeaeeeel.deeeeiekeleelkeee 144
                 ++++e+             + e+  ++ e++e+ ++ e ++k++ee + ee
  KHJ34357.1 593 KKNTETtegelvessepdiN-EQYASAFESSEEdKDFEVVKKHVEETEWEE 642
                 11111122334433333221.222233333333133344556666655544 PP

  == domain 5  score: -3.0 bits;  conditional E-value: 1.5
                 ...................X..XXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3381  98 kkekeekeeeeeedee..ee..eeeeeeaeeeeldeeeeiekeleelkeeekkkkKrek 152
                 kk +e k+ ++ + ++  e+  +++   ++ee ++e+e+  +++ +l ++ +kkk r+k
  KHJ34357.1 731 KKVREAKSRKKFKAAQrlEKlrKKSALLQDEEGMTEKEK-AQSIVKLMSKAAKKKPRQK 788
                 333333333333322222224234444455555566555.5556666666666665555 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0     4e-06     0.014       7      56 ..      27      81 ..      22     140 .. 0.76
   2 ?   -2.7   0.0       1.3   4.6e+03      44      62 ..     415     456 ..     409     500 .. 0.63

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 4e-06
  Methyltransf_23  7 eelsdklerllpk..lraggrvLdiGcGtGillevlren...gfsvtgvDlspea 56
                     +++ ++++   ++  l++++ +Ld+ ++ G++++v++e    g  ++gvDlsp++
       KHJ34357.1 27 RAAFKLIQLNKKYgfLERSKVLLDLCAAPGSWCQVAAESmptGSLIVGVDLSPIK 81
                     5555555544444558999*****************88743355899*****973 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.3
  Methyltransf_23  44 gfsvtgvDlspeaveiae.......................k 62 
                      +fs+  vD s ++++ia+                       +
       KHJ34357.1 415 VFSIKTVDKSGAMSKIAKgkmvsitkkgqdedieneigsdsG 456
                      578888888888888888777766555555555544433330 PP

>> DUF3915  Protein of unknown function (DUF3915)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.6    0.0002      0.72      27      62 ..     370     404 ..     362     413 .. 0.86
   2 ?   -2.6   0.1       1.4   5.2e+03      27      52 ..     519     544 ..     501     597 .. 0.54
   3 ?   -3.6   0.0       2.8     1e+04      22      44 ..     624     646 ..     615     681 .. 0.64

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0002
     DUF3915  27 ererederekerekkkerhavcnvlasiavgtelsl 62 
                 e + +++re+ re +k+++++  +  +++v te+ l
  KHJ34357.1 370 E-KAQRKRERRRENEKKQKEIIRMQLNMTVPTEIGL 404
                 3.346789*************************987 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.4
     DUF3915  27 ererederekerekkkerhavcnvla 52 
                 + +  de   e + k + + + n+ +
  KHJ34357.1 519 KEDSSDEDSDEDDPKTQDPLLTNLKN 544
                 33344444444444455555555444 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 2.8
     DUF3915  22 rdrerererederekerekkker 44 
                  d++ e  +++  e e e ++ +
  KHJ34357.1 624 EDKDFEVVKKHVEETEWEEEPSK 646
                 44555555555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (834 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2144  (0.119583); expected 358.6 (0.02)
Passed bias filter:                      569  (0.0317363); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.84u 0.29s 00:00:01.12 Elapsed: 00:00:00.45
# Mc/sec: 5566.42
//
Query:       KHJ34358.1  [L=201]
Description: hypothetical protein EV44_g1522 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.016   15.3   2.1      0.074   13.1   0.1    2.3  2  PT-VENN   Pre-toxin domain with VENN motif


Domain annotation for each model (and alignments):
>> PT-VENN  Pre-toxin domain with VENN motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.4     0.018   3.2e+02      13      30 ..      32      48 ..      30      72 .. 0.81
   2 ?   13.1   0.1   4.1e-06     0.074       2      37 ..      86     121 ..      85     124 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.018
     PT-VENN 13 salstlaaGlaGgvvggt 30
                  ls l +  +G+++g t
  KHJ34358.1 32 GVLSGLSGLFIGAIAG-T 48
                5688888888888888.4 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 4.1e-06
     PT-VENN   2 seLteeEKqtvsalstlaaGlaGgvvggtladavaG 37 
                 +eL+++EK  +s++s +++G + g++     +++ G
  KHJ34358.1  86 DELSPNEKLSISSISGALGGGTTGAILRGRKNVIPG 121
                 69****************999888775555666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       553  (0.0308439); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1526.16
//
Query:       KHJ34359.1  [L=1741]
Description: putative rrna biogenesis protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.3e-64  212.5  33.3    2.2e-13   50.3   0.7   13.2 13  S1             S1 RNA binding domain
      2e-08   34.3   0.0      0.075   13.9   0.0    3.7  3  TPR_14         Tetratricopeptide repeat
    1.2e-06   28.7   0.0      0.013   15.5   0.0    3.1  2  Suf            Suppressor of forked protein (Suf)
    0.00018   21.9   0.0       0.31   11.6   0.0    3.4  3  TPR_19         Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.024   14.9   0.4        1.7    8.9   0.0    3.6  3  FLgD_tudor     FlgD Tudor-like domain
      0.034   14.8   0.1        4.5    8.1   0.0    3.4  3  TPR_6          Tetratricopeptide repeat
        0.1   13.3   0.0        7.3    7.3   0.0    2.5  2  TPR_16         Tetratricopeptide repeat
       0.12   12.3   0.0         12    5.9   0.0    3.7  3  RNase_II_C_S1  RNase II-type exonuclease C-terminal S1 domain
       0.39   11.0   4.4         17    5.9   0.0    3.9  4  TPR_8          Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> S1  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.024        47       4      44 ..     106     145 ..     103     171 .. 0.82
   2 !    7.6   0.1    0.0024       4.8       5      40 ..     221     259 ..     219     287 .. 0.84
   3 ?   -1.3   0.1       1.5   2.9e+03       5      20 ..     314     329 ..     313     370 .. 0.79
   4 !   17.2   0.1   2.4e-06    0.0048      18      42 ..     428     452 ..     420     473 .. 0.85
   5 !   21.4   0.4   1.2e-07   0.00023       3      75 .]     503     579 ..     501     579 .. 0.91
   6 !   34.5   0.0   9.8e-12   1.9e-08      10      75 .]     604     668 ..     602     668 .. 0.97
   7 ?    3.7   0.1     0.039        78       1      39 [.     683     722 ..     683     739 .. 0.79
   8 !   35.5   0.0   4.6e-12   9.1e-09       5      75 .]     783     852 ..     779     852 .. 0.96
   9 !    6.9   0.0    0.0039       7.8       9      69 ..     888     952 ..     883     958 .. 0.91
  10 ?    4.7   0.0      0.02        40      12      75 .]     999    1063 ..     997    1063 .. 0.88
  11 !   18.4   0.2   9.9e-07     0.002       3      75 .]    1076    1147 ..    1074    1147 .. 0.97
  12 !   19.6   0.1   4.2e-07   0.00083       2      75 .]    1169    1241 ..    1168    1241 .. 0.96
  13 !   50.3   0.7   1.1e-16   2.2e-13       2      74 ..    1258    1331 ..    1257    1332 .. 0.95

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.024
                 TTCEEEEEEEEEETTEEEEEETTTEEEEEEGGGSSSSCEES CS
          S1   4 kgevveGeVtsvtkgGafVelgngvegfvpaselsrdarve 44 
                 +g  v G + ++ +  +   l n+ +g+vp+ ++s++  +e
  KHJ34359.1 106 TGSLVLGQILEIYDSEIALTLPNNLTGYVPITSISDK-LTE 145
                 68889999999999999999***************99.333 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0024
                 TCEEEEEEEEEETTEEEEEET...TTEEEEEEGGGSSSS CS
          S1   5 gevveGeVtsvtkgGafVelg...ngvegfvpaselsrd 40 
                 +  ++G ++sv+++G++ +lg     v+gf + +e+ +d
  KHJ34359.1 221 NSTLMGSIISVEDHGVILDLGledSSVRGFMSSKEIGND 259
                 56789****************988899*******99998 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 1.5
                 TCEEEEEEEEEETTEE CS
          S1   5 gevveGeVtsvtkgGa 20 
                 g+vve+ Vt+++  G+
  KHJ34359.1 314 GTVVEALVTDISARGI 329
                 8999999999987776 PP

  == domain 4  score: 17.2 bits;  conditional E-value: 2.4e-06
                 TEEEEEET.TTEEEEEEGGGSSSSCE CS
          S1  18 gGafVelg.ngvegfvpaselsrdar 42 
                  G+fV+++  g++gfv++s +s++ +
  KHJ34359.1 428 IGLFVDVDiKGITGFVHISRISDK-K 452
                 79********************98.3 PP

  == domain 5  score: 21.4 bits;  conditional E-value: 1.2e-07
                 TTTCEEEEEEEEEET.....TEEEEEETTTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEEC CS
          S1   3 ekgevveGeVtsvtk.....gGafVelgngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsik 75 
                 e+g++v+G+V +++       G+ V+l  g+ g+vp  ++s+  +  +p++++k+G +v ++vl +d+++r i+l++k
  KHJ34359.1 503 EVGTIVQGKVEKLVIsssgvNGVLVNLADGICGLVPQVHISDL-KLLHPEQKFKEGTKVNARVLSTDYNKRQIRLTLK 579
                 789999999988776667789********************98.999***************************9876 PP

  == domain 6  score: 34.5 bits;  conditional E-value: 9.8e-12
                 EEEEEEETTEEEEEETTTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEEC CS
          S1  10 GeVtsvtkgGafVelgngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsik 75 
                 G+++++ + Ga V++ ++v+gf+p++e+s    ++dp++++++G+ v v vl++d d +r+ +s+k
  KHJ34359.1 604 GTIINIIPSGAVVQFYGNVRGFLPVAEMSET-YIKDPSQHFHIGQVVNVFVLNIDPDLERMTVSCK 668
                 99****************************9.9****************************99986 PP

  == domain 7  score: 3.7 bits;  conditional E-value: 0.039
                 HSTTTCEEEEEEEEEETTEEEEEET.TTEEEEEEGGGSSS CS
          S1   1 kpekgevveGeVtsvtkgGafVelg.ngvegfvpaselsr 39 
                 k+e+g+vv+++V+  t++ +    +  g ++ +++++ls+
  KHJ34359.1 683 KLEIGQVVSAKVIGKTNEEIQLTTEqDGLQAVLSVEHLSD 722
                 6799*************88777666668888888888886 PP

  == domain 8  score: 35.5 bits;  conditional E-value: 4.6e-12
                 TCEEEEEEEEEETTEEEEEETTTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEEC CS
          S1   5 gevveGeVtsvtkgGafVelgngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsik 75 
                 ++ v G V+++t+  +fV++g+gv+gf+++s ls+d ++  pd   + ++ +++kv k+d  +r  +ls+k
  KHJ34359.1 783 NTMVNGFVKNITQTSVFVQFGAGVTGFLSKSKLSDD-CIALPDFGMRRHQSLRAKVVKMDQSNRQFQLSMK 852
                 67899*******************************.*******************************987 PP

  == domain 9  score: 6.9 bits;  conditional E-value: 0.0039
                 EEEEEEEETTEEEEEETTTEEEEEEGGGSSSS....CEESCHHHCEETTEEEEEEEEEEETTTTE CS
          S1   9 eGeVtsvtkgGafVelgngvegfvpaselsrd....arvedpdevlkvGdevkvkvlkvdkdrrr 69 
                 ++ +tsv +  + V+l  +v+g +  s++ +     ++++ p + ++  + ++v+vl++ ++r+ 
  KHJ34359.1 888 KARITSVKDTQLNVQLADNVKGRIDFSQIFDSwdsiKDHKRPLKSFSTRQIIDVRVLGTHDARKH 952
                 899**************************888889999999*****************9999886 PP

  == domain 10  score: 4.7 bits;  conditional E-value: 0.02
                  EEEEETTEEEEEETTTEEEEEEGGGSSSS.CEESCHHHCEETTEEEEEEEEEEETTTTEEEEEEC CS
          S1   12 VtsvtkgGafVelgngvegfvpaselsrd.arvedpdevlkvGdevkvkvlkvdkdrrriilsik 75  
                  V +vt++ + V++  +++g ++  e s+d  r e+ + ++ vG  +k+ v+ +d++ +r++ls +
  KHJ34359.1  999 VNNVTEDCLWVNITPNIRGRITSLEASDDvSRLENLELKFPVGSALKAHVTHIDVASNRLDLSAR 1063
                  56788888899999999999999999999777788899999*********************975 PP

  == domain 11  score: 18.4 bits;  conditional E-value: 9.9e-07
                  TTTCEEEEEEEEEETTEEEEEETTTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEEC CS
          S1    3 ekgevveGeVtsvtkgGafVelgngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsik 75  
                  ++g vv G+V++++k  + V+l     g v + +l++d   e ++ +++ G+ ++v v + d   ++i+ls++
  KHJ34359.1 1076 NVGMVVPGKVVKINKSYILVQLSDSLVGQVNLVDLADD-YSEANTAKYTRGEIIRVCVCDKDISSKKIRLSTR 1147
                  79************************************.9*******************************96 PP

  == domain 12  score: 19.6 bits;  conditional E-value: 4.2e-07
                  STTTCEEEEEEEEEETTEEEEEETTTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEEC CS
          S1    2 pekgevveGeVtsvtkgGafVelgngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsik 75  
                  ++++++v G V++v+++G+fV l  +++++  +s+ls+   ++d + ++ ++  v  kv+ vd + + +++s+k
  KHJ34359.1 1169 LNVNDIVHGFVKNVSDKGIFVSLSWKITAYARVSDLSDL-FIQDWKAQFEIDTLVTGKVISVDIAQNQVQISLK 1241
                  5799*********************************98.***********************99999999976 PP

  == domain 13  score: 50.3 bits;  conditional E-value: 1.1e-16
                  STTTCEEEEEEEEEETTEEEEEET..TTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEE CS
          S1    2 pekgevveGeVtsvtkgGafVelg..ngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsi 74  
                  +++g+ v+G+V +++++G+f+ +    +v+g++++sel++  rv d+++ + vGd+vk+ +lk++k++rr+ + +
  KHJ34359.1 1258 LQVGQLVTGKVRKIEDYGIFIVICgsDNVSGLCHKSELADQ-RVHDIKKLYEVGDTVKAIILKLEKQKRRVNFGL 1331
                  589*******************99899*************9.****************************99876 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   3.8e-05     0.075       2      35 ..    1484    1518 ..    1483    1531 .. 0.83
   2 !    7.8   0.0    0.0033       6.7       4      42 ..    1558    1596 ..    1555    1598 .. 0.92
   3 !    8.2   0.0    0.0025       4.9       6      43 ..    1633    1670 ..    1628    1671 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.8e-05
      TPR_14    2 eallalaeallalGdpdeAiallrralal.aPdda 35  
                  +++ ++ +++ +lG++ eA+a ++ra+++ +P+++
  KHJ34359.1 1484 RLWIQYMAFHVQLGNLSEARATAERAIKTiNPKEE 1518
                  6899************************6588764 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0033
      TPR_14    4 llalaeallalGdpdeAiallrralalaPddaeawllla 42  
                  + +l ++l ++G++ +A ++++++++++  ++++w+ +a
  KHJ34359.1 1558 YERLISILIQSGKHNRADTYFQKLIKKFSLSPAVWYNYA 1596
                  668999******************************998 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0025
      TPR_14    6 alaeallalGdpdeAiallrralalaPddaeawlllaq 43  
                  a++e++  +G p++ +++ + +l+++P+ +++w +l +
  KHJ34359.1 1633 AALEFHSKSGSPERGRTIIEGLLSTFPKRLDIWNQLLD 1670
                  6789999**************************98875 PP

>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.1   0.00052         1       4     119 ..    1486    1601 ..    1483    1631 .. 0.82
   2 !   15.5   0.0   6.4e-06     0.013      41     127 ..    1632    1720 ..    1629    1737 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00052
         Suf    4 wikymrasrRaeGikgaRkvFkkAR.....kkprltyevyvasAllEyyiskdkkvAtkIFelGlKkFpedeefvlkYldyLislnddnnaRvlfek 95  
                  wi+ym +      +++aR+  ++A      k+++ + +v++a+  lE +   d     ++F ++  +F++ +e   + ++ Li+  ++n+a + f+k
  KHJ34359.1 1486 WIQYMAFHVQLGNLSEARATAERAIktinpKEENEKLNVWIALLNLENVYGSDDT-TDEVFTRAC-QFNDPQEVYERLISILIQSGKHNRADTYFQK 1580
                  99999999999999999998888861222345778899****9999998666655.899**9987.699988888999******************* PP

         Suf   96 vvsklskekeakelykkfleyest 119 
                  +++k+s  +    ++  ++++  t
  KHJ34359.1 1581 LIKKFSLSP---AVWYNYAHFLHT 1601
                  *****9999...899999888655 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 6.4e-06
         Suf   41 sAllEyyisk.dkkvAtkIFelGlKkFpedeefvlkYldyLislnddnnaRvlfekvvsk..lskekeakelykkfleyestfgdlssil 127 
                  +A lE++ +   ++ ++ I e  l +Fp+  +  ++ ld  i+  d++ +R +f++ +++  l++++ ak  +kk+ e+e + gd +   
  KHJ34359.1 1632 FAALEFHSKSgSPERGRTIIEGLLSTFPKRLDIWNQLLDLEIQQGDKEIIRGVFQRFIKSrvLKPKP-AKTWFKKWSEWEEKNGDKKDCE 1720
                  6889999543257889******************************************997666777.****************866544 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.0   0.00015      0.31      14      51 ..    1472    1509 ..    1468    1515 .. 0.91
   2 ?    3.0   0.0     0.076   1.5e+02       1      54 [.    1565    1619 ..    1565    1626 .. 0.86
   3 ?    2.9   0.0     0.079   1.6e+02       6      41 ..    1643    1678 ..    1640    1679 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00015
      TPR_19   14 leqalqedpknaearllLAeallalgqldeAealLdal 51  
                  +e++l   p++++++++++  +++lg+l eA+a+ +++
  KHJ34359.1 1472 FERLLLGQPESSRLWIQYMAFHVQLGNLSEARATAERA 1509
                  78999999*************************98887 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.076
      TPR_19    1 llaegdyaeAlalleqalqedpknaearllLAeallal.gqldeAealLdalpee 54  
                  l+++g++ +A  ++++++++   ++++++++A  l  +   +d A+alL ++ ++
  KHJ34359.1 1565 LIQSGKHNRADTYFQKLIKKFSLSPAVWYNYAHFLHTQmMSPDRARALLPRATQS 1619
                  7899****************************98877768888898888776665 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.079
      TPR_19    6 dyaeAlalleqalqedpknaearllLAeallalgql 41  
                   +++   + e +l+  pk ++++ +L ++ +++g+ 
  KHJ34359.1 1643 SPERGRTIIEGLLSTFPKRLDIWNQLLDLEIQQGDK 1678
                  55556667889999********************86 PP

>> FLgD_tudor  FlgD Tudor-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0         8   1.6e+04      30      45 ..     274     288 ..     269     292 .. 0.73
   2 ?    1.4   0.0       0.2     4e+02      21      47 ..     502     530 ..     419     533 .. 0.84
   3 ?    8.9   0.0   0.00085       1.7      17      47 ..    1180    1241 ..    1095    1245 .. 0.61

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 8
                 EEEEEEE.ETTEEEEE CS
                 xxxxxxxxxxxxxxxx RF
  FLgD_tudor  30 tVdsVslstggglmLn 45 
                  V++Vs  +g  ++L+
  KHJ34359.1 274 IVTGVSS-NGKIIKLS 288
                 6999999.77776665 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.2
                 EEE-EEEEEEEEEEEE...ETTEEEEEET CS
                 xxxxxxxxxxxxxxxx..xxxxxxxxxxx RF
  FLgD_tudor  21 vaattlvygtVdsVsl..stggglmLnLg 47 
                 +++ t v+g+V++ ++  s+ +g+++nL+
  KHJ34359.1 502 IEVGTIVQGKVEKLVIssSGVNGVLVNLA 530
                 678899*******9994444445556666 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.00085
                  E................................TEEEEE-EEEEEEEEEEEE.ETTEEEEEET CS
                  x................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  FLgD_tudor   17 p................................GtsvaattlvygtVdsVslstggglmLnLg 47  
                                                     + + +tlv+g+V sV++ +++ ++++L 
  KHJ34359.1 1180 KnvsdkgifvslswkitayarvsdlsdlfiqdwKAQFEIDTLVTGKVISVDI-AQNQVQISLK 1241
                  0555555555555555555555555555555555677899************.8888888886 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.23   4.6e+02      12      29 ..    1495    1512 ..    1486    1516 .. 0.82
   2 ?    8.1   0.0    0.0023       4.5      14      31 ..    1569    1586 ..    1556    1588 .. 0.76
   3 ?   -0.4   0.0       1.2   2.3e+03      11      29 ..    1673    1691 ..    1670    1692 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.23
                  HHHHHHHHHHHHHHHHHH CS
       TPR_6   12 klgdtdkAlealerlike 29  
                  +lg+ ++A+++ er ik 
  KHJ34359.1 1495 QLGNLSEARATAERAIKT 1512
                  469************985 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0023
                  HHHHHHHHHHHHHHHH-T CS
       TPR_6   14 gdtdkAlealerlikeYP 31  
                  g++ +A +++++lik++ 
  KHJ34359.1 1569 GKHNRADTYFQKLIKKFS 1586
                  799*************96 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 1.2
                  HHHHHHHHHHHHHHHHHHH CS
       TPR_6   11 rklgdtdkAlealerlike 29  
                  +++gd++  +  ++r+ik+
  KHJ34359.1 1673 IQQGDKEIIRGVFQRFIKS 1691
                  578999999********96 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.074   1.5e+02      20      62 ..    1472    1512 ..    1466    1518 .. 0.58
   2 ?    7.3   0.0    0.0037       7.3       5      44 ..    1563    1599 ..    1560    1619 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.074
      TPR_16   20 leaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraal.r 62  
                  +e++l  +   P+  + +  +   + ++g+l eA+a  ++a+ +
  KHJ34359.1 1472 FERLLLGQ---PESSRLWIQYMAFHVQLGNLSEARATAERAIkT 1512
                  66666666...444444444444444668888888666666534 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0037
      TPR_16    5 raalragdyddAaaaleaalkrdpssPdaaeAllllgdaa 44  
                   +++++g+  +A  +++ ++k++   ++ ++ +++++  +
  KHJ34359.1 1563 SILIQSGKHNRADTYFQKLIKKF---SLSPAVWYNYAHFL 1599
                  5789*******************...88888***998655 PP

>> RNase_II_C_S1  RNase II-type exonuclease C-terminal S1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0    0.0062        12      32      57 ..     552     577 ..     530     579 .. 0.88
   2 ?   -2.3   0.0       2.3   4.6e+03       5      21 ..     889     905 ..     887     914 .. 0.71
   3 ?    1.3   0.0      0.17   3.4e+02      34      56 ..    1038    1060 ..    1033    1062 .. 0.89

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0062
  RNase_II_C_S1  32 aglplGervrVrLveADvatrrvrFe 57 
                    ++ ++G++v  r+ + D  +r++r++
     KHJ34359.1 552 QKFKEGTKVNARVLSTDYNKRQIRLT 577
                    46789*******************97 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 2.3
  RNase_II_C_S1   5 AvVvdvddrggtVqlad 21 
                    A +++v+d++  Vqlad
     KHJ34359.1 889 ARITSVKDTQLNVQLAD 905
                    55677777888888877 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.17
  RNase_II_C_S1   34 lplGervrVrLveADvatrrvrF 56  
                      p+G+++   +++ Dva+ r+++
     KHJ34359.1 1038 FPVGSALKAHVTHIDVASNRLDL 1060
                     699***************99887 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.6         9   1.8e+04      11      22 ..    1439    1450 ..    1439    1451 .. 0.89
   2 ?    3.7   0.0     0.044        87      11      29 ..    1493    1511 ..    1491    1514 .. 0.92
   3 ?    5.9   0.0    0.0085        17       9      29 ..    1563    1583 ..    1556    1583 .. 0.89
   4 ?   -0.2   0.0       0.8   1.6e+03       2      18 ..    1663    1679 ..    1662    1680 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 9
                  HHHTT-HHHHHH CS
       TPR_8   11 ylklgdyeeAke 22  
                  y++l++++++k+
  KHJ34359.1 1439 YQNLKKKKKSKK 1450
                  899****99997 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.044
                  HHHTT-HHHHHHHHHHHHH CS
       TPR_8   11 ylklgdyeeAkeyyekale 29  
                  + +lg++ eA ++ e+a++
  KHJ34359.1 1493 HVQLGNLSEARATAERAIK 1511
                  679**************98 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0085
                  HHHHHTT-HHHHHHHHHHHHH CS
       TPR_8    9 siylklgdyeeAkeyyekale 29  
                  si+++ g+++ A  y++k ++
  KHJ34359.1 1563 SILIQSGKHNRADTYFQKLIK 1583
                  799***************986 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.8
                  CHHHHHHHHHHHTT-HH CS
       TPR_8    2 eayynlgsiylklgdye 18  
                  +++++l ++ +++gd+e
  KHJ34359.1 1663 DIWNQLLDLEIQQGDKE 1679
                  79*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1741 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       572  (0.0319036); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.93u 0.24s 00:00:01.17 Elapsed: 00:00:00.42
# Mc/sec: 12545.22
//
Query:       KHJ34360.1  [L=134]
Description: putative PIF1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.9e-08   32.0   0.0    7.8e-08   31.9   0.0    1.0  1  PIF1           PIF1-like helicase
  ------ inclusion threshold ------
        0.1   10.9   0.0       0.12   10.8   0.0    1.1  1  Gly_reductase  Glycine/sarcosine/betaine reductase component 


Domain annotation for each model (and alignments):
>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.0   8.7e-12   7.8e-08     228     328 ..      29     123 ..      10     127 .. 0.80

  Alignments for each domain:
  == domain 1  score: 31.9 bits;  conditional E-value: 8.7e-12
                 ...............HHCHCCS---SS--...........EEEESSCCHHHHHHHHHHCCSSS--EEEE-EEE...........ESBSSCHHCHHHCCT CS
        PIF1 228 ieiPedlllkksedkieeivsevygdllqeltdkeyleerailcptnedvdeiNnyvlsklpgeekeylssDsisksseeieeldalypteflnslkan 326
                 i++Pe +    ++d  +   +++y++    + +++ +++rail+++n+ v   Nn++    + e + y++ D++++++ +       y++efl++l  +
  KHJ34360.1  29 IDLPEWIR---TTDDRNVFREFIYPEGQLGSGETHMFHDRAILTSKNDAVTAFNNTIAGLRNTESRDYFAFDEVQNEQVRHI---SDYSAEFLQTLGGS 121
                 55665544...23333445578899988889999***************************************988776643...369*****999776 PP

                 TS CS
        PIF1 327 gl 328
                 gl
  KHJ34360.1 122 GL 123
                 65 PP

>> Gly_reductase  Glycine/sarcosine/betaine reductase component B subunits
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   1.3e-05      0.12      72     118 ..      37      85 ..      32     114 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 1.3e-05
  Gly_reductase  72 vegegevFpGvigkvetvGeGktkvlkgaavvtv..gkivgfqeGiidm 118
                      ++ +vF  +i    + G+G+t+++++ a++t+  + + +f++ i  +
     KHJ34360.1  37 TTDDRNVFREFIYPEGQLGSGETHMFHDRAILTSknDAVTAFNNTIAGL 85 
                    5566799*************************76114455577776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       323  (0.0180155); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1003.31
//
Query:       KHJ34361.1  [L=709]
Description: putative wd domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.1e-12   45.9  17.9     0.0091   16.8   0.3    7.2  7  WD40           WD domain, G-beta repeat
    0.00024   21.3   0.7        1.4    9.3   0.0    4.9  6  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
  ------ inclusion threshold ------
      0.029   12.8   0.0      0.046   12.2   0.0    1.2  1  Met_asp_mut_E  Methylaspartate mutase E chain (MutE)
      0.059   12.3   0.1         13    4.6   0.0    3.0  3  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.1     0.078   3.5e+02      22      36 ..     265     279 ..     215     279 .. 0.81
   2 !    5.8   0.1    0.0062        28       6      36 ..     296     327 ..     292     329 .. 0.82
   3 !   15.9   0.1   4.1e-06     0.019       6      38 .]     338     374 ..     333     374 .. 0.70
   4 !    9.1   0.1   0.00056       2.5      13      38 .]     445     473 ..     425     473 .. 0.74
   5 ?    2.7   0.1      0.06   2.7e+02       7      37 ..     494     529 ..     488     530 .. 0.80
   6 ?   -1.3   0.0       1.1     5e+03      21      36 ..     587     604 ..     566     605 .. 0.65
   7 !   16.8   0.3     2e-06    0.0091       7      37 ..     643     673 ..     637     674 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.078
                 SSEEEEEETTSEEEE CS
        WD40  22 gawlasGsdDgtvri 36 
                 ++++a G++Dg vr+
  KHJ34361.1 265 NSLVAVGDEDGRVRL 279
                 445888999****97 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0062
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvri 36 
                 +++ H + + +++ s+d + l+++s D++ r+
  KHJ34361.1 296 SFRVHqNAIIDMSLSDDDTRLVTASGDQSSRV 327
                 7899*888879998999999998877999887 PP

  == domain 3  score: 15.9 bits;  conditional E-value: 4.1e-06
                 EEESS.SSEEEEE....EETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtsla....fspdgawlasGsdDgtvriWd 38 
                 +l +H  s    a     s +++ +a++s+Dg+++iWd
  KHJ34361.1 338 VLGAHtASLKQ-ArfqpGSNNSNVIATSSRDGNIHIWD 374
                 56667444433.245557788888*************9 PP

  == domain 4  score: 9.1 bits;  conditional E-value: 0.00056
                 EEEEE..EETTSSEEEEEE.TTSEEEEEE CS
        WD40  13 vtsla..fspdgawlasGs.dDgtvriWd 38 
                 vts++   s+ +++l+s+s  D  v++Wd
  KHJ34361.1 445 VTSIQflSSQLNHLLVSSSeADSVVKLWD 473
                 677754444444447888745*******9 PP

  == domain 5  score: 2.7 bits;  conditional E-value: 0.06
                 EESS.SS....EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   7 ltGH.ss....vtslafspdgawlasGsdDgtvriW 37 
                    H ++    ++s++ s+d + l + ++D+tv+++
  KHJ34361.1 494 PQSHgKWrrfgISSMSISSDCSRLYTLCKDNTVYVY 529
                 4567655777799**99999999998789****998 PP

  == domain 6  score: -1.3 bits;  conditional E-value: 1.1
                 TSSE..EEEEETTSEEEE CS
        WD40  21 dgaw..lasGsdDgtvri 36 
                 dg+   la Gs Dg   i
  KHJ34361.1 587 DGKCemLAVGSSDGCAVI 604
                 444454888988997665 PP

  == domain 7  score: 16.8 bits;  conditional E-value: 2e-06
                 EESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   7 ltGHss.vtslafspdgawlasGsdDgtvriW 37 
                 ++GH+  v sl + +dg++++  sdD  vr+W
  KHJ34361.1 643 IRGHDReVGSLTWTSDGDLVT-VSDDFIVRLW 673
                 47**336************85.677******* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0    0.0003       1.4       4      81 ..     262     344 ..     260     354 .. 0.82
   2 ?   -0.5   0.0      0.36   1.6e+03      48      67 ..     356     375 ..     350     378 .. 0.87
   3 ?   -1.8   0.0       0.9     4e+03      41      75 ..     445     482 ..     438     491 .. 0.63
   4 ?   -3.2   0.0       2.4   1.1e+04      41      66 ..     505     530 ..     501     533 .. 0.79
   5 ?   -0.7   0.0      0.39   1.8e+03      51      69 ..     591     609 ..     578     629 .. 0.70
   6 !    4.8   0.0    0.0077        35      35      56 ..     644     665 ..     589     677 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0003
  ANAPC4_WD40   4 cptmDLiAlatedgellvfRlng......qrvwtl..eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  c+t+ L+A++ edg++++                +  +   +++ + +++ + d++ L+ a  d + r++d++++++++ l +++ 
   KHJ34361.1 262 CNTNSLVAVGDEDGRVRLLEAGKfenskfSD---IflSFRVHQNAIIDMSLSDDDTRLVTASGDQSSRVVDMKTQTTISVLGAHTA 344
                  99999*********99987653333333344...3445789999********************************9998877765 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.36
  ANAPC4_WD40  48 pdgklLavaysdgevrllda 67 
                  ++ +++a +  dg++++ d 
   KHJ34361.1 356 NNSNVIATSSRDGNIHIWDL 375
                  67889999999***999885 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.9
  ANAPC4_WD40  41 vrsLaW..kpdgklLav.aysdgevrlldaesgkvvhs 75 
                  v+s+++  ++ ++lL+  + +d+ v+l d+ + ++ ++
   KHJ34361.1 445 VTSIQFlsSQLNHLLVSsSEADSVVKLWDIRNIQTRRH 482
                  55555422233455554155788899999988877766 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 2.4
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlld 66 
                  ++s++ + d + L   ++d++v +++
   KHJ34361.1 505 ISSMSISSDCSRLYTLCKDNTVYVYS 530
                  56777777888899999999998887 PP

  == domain 5  score: -0.7 bits;  conditional E-value: 0.39
  ANAPC4_WD40  51 klLavaysdgevrlldaes 69 
                  ++Lav+ sdg   ++   +
   KHJ34361.1 591 EMLAVGSSDGCAVIFPTDE 609
                  5899999999777765554 PP

  == domain 6  score: 4.8 bits;  conditional E-value: 0.0077
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLava 56 
                   ++d+ev sL W  dg l  v+
   KHJ34361.1 644 RGHDREVGSLTWTSDGDLVTVS 665
                  57899************98876 PP

>> Met_asp_mut_E  Methylaspartate mutase E chain (MutE)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     1e-05     0.046     365     396 ..     255     286 ..     246     306 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1e-05
  Met_asp_mut_E 365 vPFapskanagkvlparDneGavrllefgnlp 396
                    +PF+   +n+++++++ D++G+vrlle+g++ 
     KHJ34361.1 255 IPFCAVACNTNSLVAVGDEDGRVRLLEAGKFE 286
                    9****************************876 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.003        13     169     210 ..     282     324 ..     272     334 .. 0.86
   2 ?    2.7   0.0     0.011        49     186     219 ..     342     378 ..     323     384 .. 0.69
   3 ?    0.9   0.0     0.039   1.8e+02     145     214 ..     457     529 ..     444     539 .. 0.69

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.003
    Ge1_WD40 169 sgelsveeieegllkieehs.liveaafspdGtalatasedGe 210
                  g+ ++++ ++ +l ++ h   i++ ++s d t l tas d  
  KHJ34361.1 282 AGKFENSKFSDIFLSFRVHQnAIIDMSLSDDDTRLVTASGDQS 324
                 6788899999999**9999769*****************9965 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.011
    Ge1_WD40 186 ehsliveaaf...spdGtalatasedGevkffqvyle 219
                 +++ + +a f   s +  ++at+s dG ++ + +   
  KHJ34361.1 342 HTASLKQARFqpgSNNSNVIATSSRDGNIHIWDLRCR 378
                 3458888988333456789***********9987665 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.039
    Ge1_WD40 145 kllvltrg..dkaeiwsvdmiaskygsgelsveeieegllkieehs.liveaafspdGtalatasedGevkff 214
                 +llv + +  + +++w++  i+++  + ++  +++++   + +     i++ ++s+d   l t ++d +v  +
  KHJ34361.1 457 HLLVSSSEadSVVKLWDIRNIQTRRHRNQIPLSTTRQPQSHGKWRRfGISSMSISSDCSRLYTLCKDNTVYVY 529
                 5555554311457899999997766665555555555444444443379999999999999999999999877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (709 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       368  (0.0205254); expected 358.6 (0.02)
Passed bias filter:                      310  (0.0172904); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.45
# Mc/sec: 4708.98
//
Query:       KHJ34362.1  [L=659]
Description: putative catalase 1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.2e-160  534.8   0.3   1.7e-160  534.4   0.3    1.1  1  Catalase      Catalase
    3.3e-18   65.7   0.0    6.1e-18   64.8   0.0    1.5  1  Catalase-rel  Catalase-related immune-responsive
    1.1e-09   38.1   0.0      2e-09   37.3   0.0    1.4  1  Catalase_C    C-terminal domain found in long catalases
    1.2e-09   38.2   0.0    1.8e-09   37.6   0.0    1.3  1  DJ-1_PfpI     DJ-1/PfpI family


Domain annotation for each model (and alignments):
>> Catalase  Catalase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  534.4   0.3  3.7e-164  1.7e-160      36     380 ..       2     349 ..       1     351 [. 0.98

  Alignments for each domain:
  == domain 1  score: 534.4 bits;  conditional E-value: 3.7e-164
                 HHHT------SS--SEEEEEEEEEESS--TTT---GGGSSTT-EEEEEEEEE-SS--TT--SSSSS--EEEEEEEETTEEEEEEEESSSS-S-S-GGGH CS
    Catalase  36 hfdreripeRvvhAkGagahgeFevtkdisdltkakllskvgkktpvlvRfStvagekgsadtaRdvrGfavkfyTeeGnwDlvgnntpvFfirDpikf 134
                 +fd+eripeRvvhA+G+ga+g F+++++++++t ak+l++++++tpv+vRfStv g++gsadt+RdvrGfa+kfyTeeGnwD+vgnn+pvFfi+D++kf
  KHJ34362.1   2 KFDHERIPERVVHARGTGAFGNFRLYESAKEFTFAKVLTETSRTTPVFVRFSTVLGSRGSADTVRDVRGFAIKFYTEEGNWDIVGNNIPVFFIQDAMKF 100
                 7************************************************************************************************** PP

                 HHHHHHHSB-TTT-SB....-HHH..HHHHHHT-GGGHHHHHHHHSGGGSBS-GGGS-EE--S-EEEE-TT--EEEEEEEEEETT---B--HHHHHHHH CS
    Catalase 135 pdlihsqkrepqtnlk....daam..fwdflslnpeslhqvlilfsdrgipksyrhmngygvhtfklvnkegevvyvkfhfktkqgvknltaeeaekla 227
                 pd+ih+ k+ep+t+++    +  +  fwdf  l+ e++h++++++sdr+ip+s+r+m+g+gv+t++l+n++g++ +vkfhf+++ gv++l+++ea k+ 
  KHJ34362.1 101 PDIIHAGKPEPDTEVPqaqsA--HnnFWDFQFLHSEATHMFMWALSDRAIPRSFRMMQGFGVNTYTLINAAGNRSFVKFHFTPTLGVHSLVWDEALKIC 197
                 ***************977433..356************************************************************************* PP

                 HH-TTHHHHHHHHHHHTT---EEEEEEEEEEHHHHTTTHHHHT-TT----TTTS--EEEEEEEEEE--S-HHHHTTT----TT---TTEE--S-HHHHH CS
    Catalase 228 gedpdyatrdLyeaiekgeypewelyvqvmteeeaeklrfnilDlTkvwpekevplrevGkltLnrnpenyFaevEqvafspsnlvpGiepseDklLqg 326
                 g+dpd++++dLy+ai+kg +p+w++ +q+ +e+++++++f+ilD+Tkvw+e+ +p+r +G+l+Ln+n++++F+e+Eqvaf+++++vpGi++s+D+lLqg
  KHJ34362.1 198 GQDPDFHRKDLYTAINKGVFPKWKFGIQICPESRQDDFDFDILDATKVWSEELLPIRYIGELELNKNVDEFFTETEQVAFCTQHIVPGIGFSDDPLLQG 296
                 *************************************************************************************************** PP

                 HHHHHHHHHHHHT-TTGGGSGGG---..---S----TT-.....S-S---SS-S CS
    Catalase 327 RlfsYadtqryRlGvnyqqlpvNrpkakvanyqrdGamrveankgkepnYepns 380
                 R fsY dtq +RlGvn+q+lp+Nrp ++++n++rdG+ r++++kgk  nY+pn+
  KHJ34362.1 297 RNFSYFDTQLSRLGVNWQELPINRPICPIMNNHRDGQGRHSIHKGK-FNYWPNR 349
                 ******************************999**********999.*****97 PP

>> Catalase-rel  Catalase-related immune-responsive
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.8   0.0   1.4e-21   6.1e-18       2      65 .]     380     443 ..     379     443 .. 0.96

  Alignments for each domain:
  == domain 1  score: 64.8 bits;  conditional E-value: 1.4e-21
                   HGG--SSHHHHHHHHHS-HHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHH-HHHHHHHHHHH CS
  Catalase-rel   2 edfddhfsQagllyrsmseeekerlvnniafelskvedeeiqerqlehfakvDpdlgqrVaeal 65 
                    +f +hf+Qa+l+y+s+se ek++l+++  fel++++d+ ++e++++ ++ +D +l+q+Vae++
    KHJ34362.1 380 RKFSEHFNQAQLFYNSLSEIEKTHLIAAAGFELDHCDDPIVYENMVSRLTCIDLNLAQAVAEKV 443
                   5799*********************************************************975 PP

>> Catalase_C  C-terminal domain found in long catalases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.0   4.4e-13     2e-09       2     115 ..     481     590 ..     480     624 .. 0.81

  Alignments for each domain:
  == domain 1  score: 37.3 bits;  conditional E-value: 4.4e-13
  Catalase_C   2 glkVgiLasndseaslaqakalaaalaaegvdvtvvaeklg.....saegv..nrTYstadaveFDaivvadgaeslfsakataasslfpagrplqlll 93 
                 +++++i+++  +  s ++ + +++al +e++ v  +++k +     + e +  ++ + ++++++FD++++ +g +++        ++l ++gr+++ ++
  KHJ34362.1 481 SRTIAIIVG--DGFSFEHYSIVKKALIEEKAFVYTIGPKRQhitalNGEKItsDHHFEAMRSTLFDSLYIPGG-DHI--------EELIKKGRVIHWVR 568
                 799*****7..678***********************8877565433333533577*****************.333........36899********* PP

  Catalase_C  94 dayrhgKpigalGsgaealkaa 115
                 +a+ h+K+iga+G+g e+++++
  KHJ34362.1 569 EAFGHCKAIGATGEGIELIQKS 590
                 ****************999843 PP

>> DJ-1_PfpI  DJ-1/PfpI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.6   0.0   4.1e-13   1.8e-09       2     105 ..     483     585 ..     482     599 .. 0.93

  Alignments for each domain:
  == domain 1  score: 37.6 bits;  conditional E-value: 4.1e-13
                 EEEEEEETTBEHHHHHHHHHHHHHTTEEEEEEESSTSEEEETTSEEEE-SEEGGGCTCCG-SEEEE--BHHHHHHHHTSHHHHHHHHHHHHTT-EEEEE CS
   DJ-1_PfpI   2 kvlvlladgvedvElivpvdvlkragikvdvvsvdkeevkgsrGlkvtvdaslddvkaaeyDalvlpGGragperlrenekvvelvkefaekgklvaaI 100
                 +++++++dg++   +++  ++l ++   v +++++++ ++  +G+k+t d+ ++ +++  +D l +pGG+   e+l ++ +v+++v+e++   k ++a 
  KHJ34362.1 483 TIAIIVGDGFSFEHYSIVKKALIEEKAFVYTIGPKRQHITALNGEKITSDHHFEAMRSTLFDSLYIPGGDH-IEELIKKGRVIHWVREAFGHCKAIGAT 580
                 799********************************************************************.88888889*****************99 PP

                 TTTHH CS
   DJ-1_PfpI 101 Cagpq 105
                 + g  
  KHJ34362.1 581 GEGIE 585
                 98854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (659 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4876.04
//
Query:       KHJ34363.1  [L=94]
Description: hypothetical protein EV44_g0465 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (94 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      254  (0.014167); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 723.33
//
Query:       KHJ34364.1  [L=506]
Description: putative histone-lysine n- h3 lysine-79 specific [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-74  247.4   0.0    1.5e-73  246.7   0.0    1.3  1  DOT1      Histone methylation protein DOT1


Domain annotation for each model (and alignments):
>> DOT1  Histone methylation protein DOT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  246.7   0.0   8.6e-78   1.5e-73       1     203 [.     291     492 ..     291     493 .. 0.99

  Alignments for each domain:
  == domain 1  score: 246.7 bits;  conditional E-value: 8.6e-78
                 HHHHTGGGGGGGGS--SSGGG----B-HHHHHHHHHHTT--TT-EEEEES-TTSHHHHHHHHHH--SEEEEEE--HHHHHHHHHHHHHHHHHHHHTTB- CS
        DOT1   1 YeravspeaekLkkYkafsnevYGEllpeflsevldkvnlkkedvFvDLGSGvGnvvlqaalevgcklsvGvEimdnaselaekqkeelkkrlklfGkk 99 
                 Y ravsp++e LkkY++++++vYGEllp+++s++l +  l++e++FvDLGSGvGnvvlqa+le+gc+ s+G+E+m+na +lae+qk+e+  r++l+G+ 
  KHJ34364.1 291 YIRAVSPRVEILKKYENGTDNVYGELLPPLVSKMLREAGLTSESIFVDLGSGVGNVVLQASLEFGCE-SWGCEMMENAFTLAEAQKKEFDMRCSLWGIM 388
                 889****************************************************************.******************************* PP

                 ---EEEESS-STT-HHHHHHGGG-SEEEE--TT--HHHHHHHHHHHTT--TT-EEEESS-SS-TT----SSSTT-GGGGEEEEEEE--TT-BTTBSS-- CS
        DOT1 100 lakiefirksFvenekveeiieeadvilvNNfaFdaelnkqlkellqdlkegtkiislkslvpskykinsrnledivnilkveelkllegsVSWTskkv 198
                 ++ + ++r++F+en k++++i++advilvNN+aF+++ln++lk+l++d k+g++iislks+v+ +++i +rnl d  n  +v+e ++++ sVSWT +++
  KHJ34364.1 389 TGGVFLERGDFLENRKIHSVIQKADVILVNNQAFTPDLNQKLKDLFLDSKDGCRIISLKSFVQYGHQIPNRNLWDPSNLFDVTEREYHSRSVSWTDAGG 487
                 *************************************************************************************************** PP

                 EEEEE CS
        DOT1 199 eyyls 203
                 +yy+ 
  KHJ34364.1 488 KYYIA 492
                 ***95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (506 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       962  (0.0536561); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.21s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 3917.07
//
Query:       KHJ34365.1  [L=331]
Description: putative phospholipase a2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-59  200.1   1.2    6.3e-59  199.7   1.2    1.0  1  Cupin_8   Cupin-like domain
     0.0047   16.4   0.5      0.041   13.4   0.5    2.1  1  Cupin_4   Cupin superfamily protein


Domain annotation for each model (and alignments):
>> Cupin_8  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.7   1.2   7.1e-63   6.3e-59       3     253 ..      33     310 ..      31     311 .. 0.86

  Alignments for each domain:
  == domain 1  score: 199.7 bits;  conditional E-value: 7.1e-63
     Cupin_8   3 effreyvakskPviikgalkdwpalqkwtddeylleylkekaedvkvsvektpdgeadsf...keneelkfvkpeeeemtfkdfldelearrdtrsep. 97 
                  +f++yv+ ++P++++  ++dw+a++ w+     + +lk   +d+ ++v++tp g+ads    ++++el fvkp  ++++f++f+d++ ++++++++  
  KHJ34365.1  33 LEFMRYVSLNRPFVFRSGASDWEATRCWN-----VTTLKTILKDQFINVAVTPFGNADSPvwnENEDELLFVKPWIVQQQFSKFIDFIIEQENKKNDDn 126
                 6789************************9.....69999999999999999999****998875567899*****************777766665556 PP

     Cupin_8  98 .......yaylqnanlasefpelked..sdlpfateafgkkpeavnlWlGnsasvsslHkDhyeNlycvvrGrKkftLfpPsdapflyea......... 178
                        y ++qn+nl++e+ +l  +  sd+p+a+ a++k p+a+nlWlGns sv++lHkD yeN+y+++ G K+f+LfpP  +  + e+         
  KHJ34365.1 127 yelkevrYCQTQNDNLRDEYVSLFPHvaSDIPWARIALQKTPDAINLWLGNSLSVTALHKDNYENIYVQIIGSKHFVLFPPIAYAGISEQtlapasyik 225
                 99999999999************98888***********************************************************888666666666 PP

     Cupin_8 179 ........slsptedgtv..vssvdve.epdlekfp.rlkdakkalevtlnaGevLylPalWfHeVksla.eeplhlavnywydmsfd 253
                         +   +e+g++  +++++ + epd+++ + +++d   +++vtl +G++LylPalW+H+V+++  ee++++avnywydm+f+
  KHJ34365.1 226 tpdnkwkiQ---KENGAKipFPTWNENkEPDKHSLHkKYSDLIVPIRVTLGKGDILYLPALWYHKVSQSCsEEGICCAVNYWYDMQFN 310
                 666664321...23333333666664348888765537777799************************999999***********986 PP

>> Cupin_4  Cupin superfamily protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.5   4.5e-06     0.041     176     197 ..     268     289 ..     103     307 .. 0.87

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.5e-06
                 EEEEE-TT-EEEE-TT-EEEEE CS
     Cupin_4 176 edfvLepGDlLYlPrgviHqgv 197
                 + + L +GD+LYlP  + H+ +
  KHJ34365.1 268 IRVTLGKGDILYLPALWYHKVS 289
                 45789**************875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       665  (0.0370907); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2518.75
//
Query:       KHJ34366.1  [L=212]
Description: hypothetical protein EV44_g4981 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.064   12.8   0.1       0.11   12.1   0.1    1.4  1  ERAP1_C   ERAP1-like C-terminal domain


Domain annotation for each model (and alignments):
>> ERAP1_C  ERAP1-like C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   5.9e-06      0.11     195     259 ..     118     182 ..      67     196 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 5.9e-06
                 HHHHHHHHHHHCC-S-HHHHHHHHHHCTTT..S-GGGHHHHHHHH..HS.TTHHHHHHHHHHHCHCC CS
     ERAP1_C 195 psekeaalralaatpdpellerllnfvlesdevrnqdlrallagl.ann.pegrellwefvkenwda 259
                 +s   aa +al+ +pd+    ++ n++  +d+ ++  lr +la++  n+     + lw+ +k+n+ +
  KHJ34366.1 118 HSSSSAACQALGLIPDESEWVEFVNQI--KDTATDNSLRRTLASIiVNSsITSAQSLWDRFKDNFTD 182
                 4667799********************..5677888888888888755415555699*******975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       563  (0.0314016); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 1677.94
//
Query:       KHJ34367.1  [L=420]
Description: hypothetical protein EV44_g3653 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.3e-05   22.7   0.2    0.00016   21.9   0.2    1.4  1  Helitron_like_N  Helitron helicase-like domain at N-terminus


Domain annotation for each model (and alignments):
>> Helitron_like_N  Helitron helicase-like domain at N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.2     9e-09   0.00016     167     190 .]       2      25 ..       1      25 [. 0.94

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 9e-09
  Helitron_like_N 167 GkvsayvytvEfQkRGlpHaHlLl 190
                      Gk+   vyt+E+QkR lpHaH+L+
       KHJ34367.1   2 GKCIGNVYTIEYQKRHLPHAHILI 25 
                      899999****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       541  (0.0301746); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3327.23
//
Query:       KHJ34368.1  [L=225]
Description: putative transcriptional factor b3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.14   11.3   0.0       0.27   10.4   0.0    1.4  1  PIF1      PIF1-like helicase


Domain annotation for each model (and alignments):
>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   1.5e-05      0.27       3      33 ..     193     224 ..     191     225 .] 0.91

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 1.5e-05
                 -HHHHHHHHHH.......HCTS-EEEEESTTS CS
        PIF1   3 neeQkkvfdaiieavln.ekgklfFvtGsgGt 33 
                 +  Q+++fd+i++++ n  k+++fF++G +Gt
  KHJ34368.1 193 SPGQRSAFDTITHTIDNgVKPNTFFLQGPAGT 224
                 567************9988************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1703.76
//
Query:       KHJ34369.1  [L=894]
Description: putative protein kinase-like (pk-like) [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   4.4e-122  408.6  10.2   4.4e-122  408.6  10.2    1.7  2  SLD3      DNA replication regulator SLD3
  ------ inclusion threshold ------
       0.13   12.4   0.2       0.36   10.9   0.2    1.7  1  efb-c     Extracellular fibrinogen binding protein C terminal
       0.46   10.2   0.0       0.46   10.2   0.0    2.4  3  DUF2859   Protein of unknown function (DUF2859)


Domain annotation for each model (and alignments):
>> SLD3  DNA replication regulator SLD3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   1.2      0.34     2e+03     488     520 ..     213     245 ..     186     258 .. 0.62
   2 !  408.6  10.2  7.3e-126  4.4e-122       1     538 [.     262     787 ..     262     788 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.34
                 .......XXXXXXXXXXXXXXXXXXXXXXXXXX CS
        SLD3 488 taasaseetepaksssaqvvPsstlrksskekr 520
                 ++ ++s+  ++++++++++vPs++++ s  +k+
  KHJ34369.1 213 SMVKKSSILPQTTPNEDAMVPSTNTDLSLDSKS 245
                 333455556666677888888888765554444 PP

  == domain 2  score: 408.6 bits;  conditional E-value: 7.3e-126
                 SHHHHHHHHHHHHHHSTTS-HHHHHHTHHHHHHHHHHHHHHTTTHHHHHHHHHHTT---HHHHHHHHTGGGS--SSHH..................HHH CS
        SLD3   1 dilenlrtqYleaLYssktsLaYFaKgpLsRaRaafqldlesnlemsdliefLrsliLstkeiDkKYretlpeviselktevedsdeg...skkkkkkk 96 
                 +i+en+rt+Y+e+LY+sk sLaYF+KgpLsRaRaaf+ + +++l+++d+ +fL +liL+++ +++KY ++++++i ++ +  +++d      kkk k +
  KHJ34369.1 262 EIFENIRTHYFEMLYLSKISLAYFVKGPLSRARAAFHKNNTQKLDPDDYCAFLHTLILPISLFNNKYTNGISNCILNFGSLNHSDDLDdtkLKKKEKGR 360
                 79*************************************************************************998776666554454577777899 PP

                 HHHHHHHHHTTT-TT--.........................HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT.........T-GGGGS----------- CS
        SLD3  97 kkkkklgkngLypeeeelirkWwkar...ddekkvs.seesreeeikkhisdLrvREtqLQiiliLEilaLeekssekqlpglekkkkakekkkeekek 191
                 +k  klgkngLy +e+ li+kWw+a+   + + ++  +e s++e +k++is+Lr+REtqLQiiliLE l  +       lp++ k+ ++++++ +++  
  KHJ34369.1 361 NKNLKLGKNGLYHNENVLIKKWWTAHedkKGDLSMGvTEISKDEFTKTKISELRIRETQLQIILILEALTFQ------ALPSCTKELESNQPELSSET- 452
                 999***********************87767778888999*****************************999......45555555444443333332. PP

                 -----------------HHHHHHHHHHHHHHHHHHHHT-...-----------SH.HTT-TTSTTSHHHHHHHTHHHHHSSSSHHHHHHHHHHHCXX.. CS
        SLD3 192 kqktkqkkkkkkkkkqnlpvlLdvllDRLcIWqsvlsdevkalaesqkleeeeea.esakkaesdslrdFcvdViiPFfsaRLPelcksinrKlggpva 289
                       k+k+k  + ++l+vl+d+++DRLcIWqsv+ ++   l++sq+l e + + +   + ++  lrdFcv+Vi+PFfs+RLP++c  i++Klg+p+ 
  KHJ34369.1 453 -----VKSKNKCHSPSDLQVLIDIYIDRLCIWQSVAVES---LKDSQSLLEMSYGsTPYARLTESFLRDFCVEVILPFFSSRLPDQCSLISEKLGVPTF 543
                 .....34456999**********************9999...777777666555537888899999*******************************99 PP

                 ................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXX....XXXXXXX....XXXXXXXXXXXX..... CS
        SLD3 290 ksp.kkkkkskekskskakpgaaakrsasqkekrrtlervltdekrsrrsvsrgpssaialsrsatatsipglkRess....eppllsliskses.... 379
                 +s   k++ks+++s++ +kpgaa+krs  + ++  +l++vlt + r+rr vs++  +aial+rsat + i+++k++++    + p+ +           
  KHJ34369.1 544 ASQkTKNSKSSSSSHNYSKPGAATKRSL-PLKSYPSLKQVLTRD-RKRRCVSQSHGKAIALMRSATMPLISSVKKDEIlsisD-PTSN------Yspda 633
                 88644444444489999**********9.777899*********.68*********9******************99832212.1222......13345 PP

                 .................XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXX.XXXXXXXXXXXXXX CS
        SLD3 380 ...gllkskslkerevdlsasasaeeakakkkaqveaeLkeaIsalrkPNRelvakeiveaaekrlsklqassrkskkpvrkpl.aqtvqVkATPkknr 474
                     ++k k++++re+++s     +++k   k +v+ eL+eaIs lrkP+R+lvak+ ++ a +r+ +l++  + skk  r++  +++vq+  TPk+nr
  KHJ34369.1 634 klaLTQKRKNISQREINFSTLDLGNNQKEVGKLNVDMELREAISVLRKPSRNLVAKDDAHFAAQRAINLSH-FEASKKLKRSKViREGVQILVTPKSNR 731
                 56899****************999*****************************************986654.7777777777775777*********** PP

                 ....................XXXXXXXXXXXXX..XXXXXXXXXXXXXXXX.......XXXXXXXX CS
        SLD3 475 kkDvlakaeeesetaasaseetepaksssaqvv..PsstlrksskekrknstssraeqsavqeTPs 538
                  k ++ k + ++    s++e+ +   ss++++   P++t +++   ++    ++++   ++q+TPs
  KHJ34369.1 732 DKFFFDKIQYSN----SPTENKSSL-SSHQKLLssPKATPHQRD--DF---FNNKSPFCSIQATPS 787
                 555555444333....333322222.222233312555543333..22...22335678******8 PP

>> efb-c  Extracellular fibrinogen binding protein C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   6.1e-05      0.36      29      48 ..     692     711 ..     686     721 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 6.1e-05
       efb-c  29 aHRkAqkAvnLvsFeykvkk 48 
                 aH  Aq+A+nL +Fe + k 
  KHJ34369.1 692 AHFAAQRAINLSHFEASKKL 711
                 8999***********87553 PP

>> DUF2859  Protein of unknown function (DUF2859)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   7.7e-05      0.46      63     126 ..     110     169 ..      93     177 .. 0.83
   2 ?   -2.8   0.4       0.8   4.8e+03      25      53 ..     198     226 ..     188     238 .. 0.74
   3 ?   -2.2   0.1      0.53   3.2e+03      26      52 ..     549     575 ..     540     588 .. 0.59

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 7.7e-05
     DUF2859  63 rklelpglqplfliGdDalSraWLkqrraaLrelqAvGlvvnvesaaalqelrelaeglelapa 126
                 +++ l+g qp++l++ D+ S++ ++ +r+  r l Av+   +v s  +lq+l+++a   +l+p 
  KHJ34369.1 110 KAIYLEGNQPMVLVARDEESKNLFALEREG-RGLYAVC---QVGSWVSLQKLQDAAGTTKLRPL 169
                 567789***************988877754.6666655...99999999***999999999885 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.8
     DUF2859  25 pakesesaevpesaaaavkeaallPvesp 53 
                 +++e+++++v e+ +++vk++++lP ++p
  KHJ34369.1 198 SSSEQKKRQVIEAIQSMVKKSSILPQTTP 226
                 45556666677777777889999998876 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.53
     DUF2859  26 akesesaevpesaaaavkeaallPves 52 
                 +++++s ++ + +++ ++++  lP++s
  KHJ34369.1 549 KNSKSSSSSHNYSKPGAATKRSLPLKS 575
                 222333333333344467788888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (894 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      298  (0.0166211); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 6330.97
//
Query:       KHJ34370.1  [L=318]
Description: putative phosphoribosyl-aminoimidazole-succinocarboxamide synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-96  322.5   0.0    2.4e-96  322.2   0.0    1.1  1  SAICAR_synt  SAICAR synthetase


Domain annotation for each model (and alignments):
>> SAICAR_synt  SAICAR synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  322.2   0.0  1.3e-100   2.4e-96       2     247 ..      17     275 ..      16     280 .. 0.94

  Alignments for each domain:
  == domain 1  score: 322.2 bits;  conditional E-value: 1.3e-100
                  EEE-SSEEEEE-SSTTEEEEEEESEEEECCCTEEEEETTHHHHHHHHHHHHHHHHH..H..--BSEEEE................-SSSEEEEE-EEE CS
  SAICAR_synt   2 lyeGKvrdvYeledddklllvakDrisAfdvvlkeeipgKGkvltqlsafwfekle..k..ipnhliksld.pe..........qlegrsmlvkklkm 84 
                  ++eGK+r++Ye+ d+++ll+va+DrisA+d+++k++ip+KG +lt lsa+wf+ l   +  +++h+i sl+ p+          +l +r+mlvk+lk+
   KHJ34370.1  17 TAEGKARNLYEV-DSKTLLFVATDRISAYDAIMKNGIPEKGILLTLLSAHWFKILPtyIpgLQTHFI-SLSlPSvvdsmpnlkaNLLNRAMLVKRLKV 112
                  689********9.888****************************************65256889***.6666334556666888999*********** PP

                  ESEEEEEEEE--HHH.......HH....HH..T--TT-EEEE.EEEEEEE--CCCT.S-EE-HHHHH.HTT-HHHHHHHHHHHHHHHHHHHHHHHHTT CS
  SAICAR_synt  85 lpvEvvvRgyltGslwkeykksgkvcgirlpeglkegeklpe.piftpstKaeegehDeniseeevvealgteeeaeeieelalavyekaaelaaerg 181
                  +p+E++vRgy+tGs+wkey++sg+v+g+ + egl+e+e +p+ pi+tpstKa+ g+hDenis +++ve++g ++ a++ie+lal++y+ a+++aaerg
   KHJ34370.1 113 FPLEAIVRGYITGSAWKEYQRSGTVHGLLVAEGLQESEAFPQgPIYTPSTKAALGDHDENISPAQAVEIIG-DKYAHRIEALALQIYKVAQNYAAERG 209
                  *****************************************98****************************.99************************ PP

                  EEEEEEEEEEEEETTTTEEEEES--.STTTEEEEETTT.....GGGB-STHHHHTT-STHHHHHHH CS
  SAICAR_synt 182 iilvDtKlEFGldeedgelvLaDevltpDssRfwdaetyeegkeqeslDKqfvRdwleeveekwke 247
                  ii++DtK+EFGlde+++e+vL+DevltpDssRfw+ ++y+ g+ q+s+DKqf+Rdwl++++ +  e
   KHJ34370.1 210 IIIADTKFEFGLDEDTDEVVLVDEVLTPDSSRFWSMKDYKIGRGQPSYDKQFLRDWLTRNNLQGLE 275
                  **********************************************************97776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (318 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.21s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2584.62
//
Query:       KHJ34371.1  [L=533]
Description: putative acyl- n-acyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0021   18.3   0.0     0.0078   16.4   0.0    1.9  2  Acetyltransf_1   Acetyltransferase (GNAT) family
  ------ inclusion threshold ------
       0.14   12.6   0.0       0.32   11.4   0.0    1.6  1  Acetyltransf_7   Acetyltransferase (GNAT) domain
       0.14   12.1   0.0       0.27   11.2   0.0    1.4  1  Acetyltransf_10  Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.3e-06    0.0078      38      99 ..     254     319 ..     209     325 .. 0.77
   2 ?   -2.9   0.0       1.3     8e+03      34      52 ..     424     442 ..     396     453 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.3e-06
                     EEETTEEEEEEEEEEEET...TSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHT.TESEEEE CS
  Acetyltransf_1  38 aeedgeliGfisllkipd...ekggvayieslaVspeyrgkGlGsaLlealeeraree.gikkivl 99 
                         g  +Gf+  +  p     +++va +  ++V+  +r+ G+G  L++ +++++++  g+ +i l
      KHJ34371.1 254 HPMSGDTLGFCATHLSPAdrsGEKHVACLALIFVHIFHRNEGIGMSLYRFAIQELKKAqGVIRIKL 319
                     344477788887777777899889********************************9978788877 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.3
                     EEEEEEETTEEEEEEEEEE CS
  Acetyltransf_1  34 gllvaeedgeliGfisllk 52 
                      +++a+ed  +++++  + 
      KHJ34371.1 424 DIVLALEDKVIVAMAITYT 442
                     4556889989999986655 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   5.4e-05      0.32       5      53 ..     249     314 ..     245     349 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.4e-05
                     EEEEEET..TEEEEEEEEEEES.........TCTEE...EEE-GGGTTSSHHHHHHHH..TT....SEE CS
  Acetyltransf_7   5 vfVaedd..gkivGfialslld.........aeitr...laVdpeyrgkGiGraLlea..ae....kgi 53 
                      fV+++   g  +Gf+a +l+          a   +   ++V+  +r+ GiG  L ++  +e    +g+
      KHJ34371.1 249 NFVIRHPmsGDTLGFCATHLSPadrsgekhvA---ClalIFVHIFHRNEGIGMSLYRFaiQElkkaQGV 314
                     56665556677789988777778887665444...1455******************844113334553 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   4.6e-05      0.27      54      93 ..     282     321 ..     245     324 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4.6e-05
  Acetyltransf_10  54 isllfVdpeyrgqGigkaLleaveeeaekdgikleltvna 93 
                      ++l+fV+  +r  Gig +L  ++++e++k+++ +++++ +
       KHJ34371.1 282 LALIFVHIFHRNEGIGMSLYRFAIQELKKAQGVIRIKLGS 321
                      6788***********************8876655777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       486  (0.0271069); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 3981.47
//
Query:       KHJ34372.1  [L=965]
Description: putative nuclear envelope protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     1e-167  558.2   0.9   3.7e-167  556.3   0.1    2.3  3  CAS_CSE1  CAS/CSE protein, C-terminus
   4.7e-151  502.8   2.6   7.9e-151  502.1   2.6    1.4  1  Cse1      Cse1
    2.6e-14   52.9   0.0    1.4e-13   50.5   0.0    2.4  1  IBN_N     Importin-beta N-terminal domain
  ------ inclusion threshold ------
       0.01   16.4   0.0       0.19   12.4   0.0    3.0  2  Ipi1_N    Rix1 complex component involved in 60S ribosome mat
      0.048   13.7   7.1       0.95    9.5   0.0    5.5  5  Xpo1      Exportin 1-like protein


Domain annotation for each model (and alignments):
>> CAS_CSE1  CAS/CSE protein, C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0      0.68   2.4e+03     295     310 ..     331     346 ..     277     349 .. 0.55
   2 ?   -1.2   0.0      0.15   5.4e+02     226     302 ..     383     465 ..     374     476 .. 0.50
   3 !  556.3   0.1    1e-170  3.7e-167       1     443 []     522     963 ..     522     963 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 0.68
    CAS_CSE1 295 Qanvftpllekvilpe 310
                  ++++++++ekvilp+
  KHJ34372.1 331 NNEILGQVVEKVILPN 346
                 2457777777777776 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.15
    CAS_CSE1 226 dlLesvieslpa...evlekylktilsllltrlqnsktekfkkrlvvflslvsakddk....glgadaliqlidkvQanvftpl 302
                 d L+++++++p    +v+ +y+++ l+ l+++ +    ++  + +  f+s+ +   ++    +   ++li+++d  Q+n+ + l
  KHJ34372.1 383 DFLQKLLQKFPElvtAVVGRYITHYLE-LFNKSSGAEWKSKDTAVYLFCSIATTSVNTashgAKTVNSLIDVVDFFQKNIANDL 465
                 566666666664111445555555554.34444433333333333333333322222110113344566777777777776555 PP

  == domain 3  score: 556.3 bits;  conditional E-value: 1e-170
    CAS_CSE1   1 erlLtlrdeqgqpiitkediaPlakdllenlFkllekdesaeklqENeylmkcimRvlivikeavlpvadvvlqkLieilevvskNPsnPrFnyYlFEa 99 
                 er+L l+ ++gq+i+ ke+i+P+akd+le+lF+l+ek + +ek+qENe+lm+c+mRvli +k++++p++d++l +L++i+ev+ +NPsnP+F+yY+FEa
  KHJ34372.1 522 ERVLSLTTSSGQNIFEKEEIKPFAKDILEHLFQLIEKGNLPEKIQENEFLMRCVMRVLIAVKDGMIPIIDNILLHLVNITEVIGRNPSNPKFYYYHFEA 620
                 8************************************************************************************************** PP

    CAS_CSE1 100 lgalvrlaakadpaavskleeaLfpvfqaiLqedvtEFvPYvfQllaaLleanksetlpesykaliellLsPalWerkgNvpaLvrLlsaiikkasqei 198
                 +g++vr+a + +++   kle++++++f +iLq++++EF+PYvfQl+aa+le++ +++lpe  k+li+++++PalWe+kgNvpaL rLl ai+++ + ei
  KHJ34372.1 621 IGTVVRYAGQVHQR---KLEDSIYASFLRILQNNIQEFMPYVFQLFAAMLEISTNDSLPEFSKNLINPIIAPALWESKGNVPALCRLLGAILHRNAPEI 716
                 *********99999...********************************************************************************** PP

    CAS_CSE1 199 vaenklepvLgiFqkLiaskandeegFdlLesvieslpaevlekylktilsllltrlq.nsktekfkkrlvvflslvsakddkglgadaliqlidkvQa 296
                 +++n+lep+LgiFq Li+   ++ ++ d+Le++i+s+++++leky+ til+l++trl+ +s+ ekfk+r+v++++lvs++d+ g+gad++i++++++Q+
  KHJ34372.1 717 IKNNQLEPILGIFQTLISKARTEIYALDILEAIITSCDVNSLEKYFPTILTLIFTRLSaQSPPEKFKQRFVRLYHLVSSRDELGMGADFFIKHAESLQT 815
                 *********************************************************835789******************99**************** PP

    CAS_CSE1 297 nvftpllekvilpelqklarpldrKlavvsltkllaesealldr.ykklwaklleallkllekpeeeaaadedeiieeadvedlgfgvaftkLntakkk 394
                 +vf  +++++ilp++q+larpldrKlav+sltk+l++s+ ++ + +k +w+k+++all+lle+p+  ++ +e +i  + dv+dl+fgv+ft+L+ +kk 
  KHJ34372.1 816 GVFAGVYLSIILPTTQQLARPLDRKLAVISLTKTLTDSQCFAVKyAKAGWGKTCDALLRLLENPPIISMDNEAAINVDIDVNDLSFGVGFTPLHSCKKI 914
                 ********************************************55668********************999999999********************* PP

    CAS_CSE1 395 eeDplpeikdvkqfvaqslkeaskahngriskivserleaeakqvLaey 443
                 ++D++p+++dvk +v+ +lk+a+++h g i ++ +erl++eak++La+y
  KHJ34372.1 915 AKDEWPDVTDVKSWVSLYLKKADSRHSGAIGRFANERLSPEAKSLLASY 963
                 ***********************************************98 PP

>> Cse1  Cse1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  502.1   2.6  2.2e-154  7.9e-151       1     370 []     151     521 ..     151     521 .. 0.99

  Alignments for each domain:
  == domain 1  score: 502.1 bits;  conditional E-value: 2.2e-154
                 HHGGGTTS---CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHHHHHHHSSS--HHHHHTHHHHHHHHHHHHH--SGGG- CS
        Cse1   1 ifkrwrplfrsdeLfleiklvldkfaepllellkkvdelieakkedkaalkvlfevllllvklfydlnsqdlPeffEdnlkelmealhkylsldnplle 99 
                 ifkrwrplf sd+L++ei++vl+kf++p+l+ll ++d++i ++k++ + lk++++v++llvklfydl++qdlP++fE+n+++++  lhkyl+++np l+
  KHJ34372.1 151 IFKRWRPLFASDALYTEINHVLEKFGKPYLQLLIATDQQIITNKDNGDILKSYMKVMNLLVKLFYDLSCQDLPPIFEENISDITVLLHKYLTYENPHLD 249
                 8************************************************************************************************** PP

                 TT-SSS--HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTC--SSGGGHHHHHHHHHHHHHHHTSHHHHTTT-SHHHHHHHHHHTHHHHHS CS
        Cse1 100 tdddeeasvleklkasicelvqlyvekyeeefepyleefveavWnllvsvskqtkyDilvskalkFltsvakvkkyaelFeneevlkeiiekvvlpnvt 198
                 t+d+ ea+ le +ka ice+++ly +kye+ f+++ e +++++W+ll++v+++tkyDilvskal+Flt+v++  k+a+ F+n+e+l +++ekv+lpnv+
  KHJ34372.1 250 TKDESEAGPLEMVKAGICEVITLYLQKYEDAFGSLCEPLITNTWTLLTTVGSETKYDILVSKALHFLTAVSNLDKHAQNFNNNEILGQVVEKVILPNVS 348
                 *************************************************************************************************** PP

                 --HHHHHHHHHSHHHHHHHHSCSS---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTT-HHHHHHHHHHHHHHHBSS--BTT.B-S-B CS
        Cse1 199 lResDeElFEdepieyirrDlEGsdvdtRrraatdllkeLkekfeakvtevvleyvekllekykenpsanWkkkdlaiyLvtslavkgevtks.Gvtst 296
                 lR+sD+E FEdepieyirrD+EG d dtRrraatd+l++L +kf ++vt vv++y+ ++le +++++ a+Wk+kd+a+yL+ s+a+ +  t+s G +++
  KHJ34372.1 349 LRDSDIEQFEDEPIEYIRRDFEGLDADTRRRAATDFLQKLLQKFPELVTAVVGRYITHYLELFNKSSGAEWKSKDTAVYLFCSIATTSVNTAShGAKTV 447
                 *************************************************************************************987655444***** PP

                 -TTS-HHHHHHHHTCHHHH-SS-S-HHHHHHHHHHHHHHGGGS-HHHHHHHHHHHHHHTTSS-HHHHHHHHHHH CS
        Cse1 297 nelvdvvdFfakeiapdLeadvneepilkvdaiKyivtFRsqlskeqlievlpllikfLksesvvvytYaaiai 370
                 n+l+dvvdFf+k+ia+dL a +  epilkvdaiK+++tFRsql+k q+++++p l+k+L+s+s+vvytYa+i++
  KHJ34372.1 448 NSLIDVVDFFQKNIANDLIASSGVEPILKVDAIKFLHTFRSQLTKAQWTAAFPPLVKNLASSSNVVYTYASITV 521
                 ************************************************************************97 PP

>> IBN_N  Importin-beta N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.5   0.0     4e-17   1.4e-13       1      73 [.      24      96 ..      24      97 .. 0.96

  Alignments for each domain:
  == domain 1  score: 50.5 bits;  conditional E-value: 4e-17
                HHHHHHHHHCSTCHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHGGSCCCHCGSXHHHHHHHHHHHHHHHH CS
       IBN_N  1 AekqLkqlekqpgflsallqilanseselevRqlAalyLknlitkhWsdeeekqslpseekeqIrnnllnllg 73
                Ae +Lk  e  pg+ ++ll+ila+++ + + R++Aal++kn+i+ +W de+ + +lps+e e+I+ +l+ l++
  KHJ34372.1 24 AEAALKIEECKPGYSLLLLNILASENVPFSCRLSAALCFKNFIKFNWADEAGQYKLPSNEVETIKKELIGLMI 96
                7888888899***********************************************************9997 PP

>> Ipi1_N  Rix1 complex component involved in 60S ribosome maturation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   5.2e-05      0.19      26      89 ..     378     445 ..     374     457 .. 0.68
   2 ?   -0.6   0.0      0.57   2.1e+03      29      64 ..     742     777 ..     736     801 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.2e-05
      Ipi1_N  26 redslkfLdllLevapeelvssawvktLnnflallgwskeksskgstsak.....atsssssskktskk 89 
                 r+ +++fL+ lL+++pe+ v+    + ++++l+l+++s+ ++ k++++a       +++s++ +++++k
  KHJ34372.1 378 RRAATDFLQKLLQKFPEL-VTAVVGRYITHYLELFNKSSGAEWKSKDTAVylfcsIATTSVNTASHGAK 445
                 7889************99.666677************75444444444448876533333333333333 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.57
      Ipi1_N  29 slkfLdllLevapeelvssawvktLnnflallgwsk 64 
                 +l++L++++  +  +++++++  +L+ +++ l++++
  KHJ34372.1 742 ALDILEAIITSCDVNSLEKYFPTILTLIFTRLSAQS 777
                 8999**********99999999****9999999976 PP

>> Xpo1  Exportin 1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.14   5.2e+02      77     103 ..       2      26 ..       1      38 [. 0.77
   2 ?    9.5   0.0   0.00027      0.95       4      41 ..     102     140 ..      99     173 .. 0.86
   3 ?   -1.3   0.0      0.55     2e+03       4      38 ..     206     240 ..     201     249 .. 0.83
   4 ?    0.6   0.0      0.15   5.4e+02      18      46 ..     489     517 ..     475     566 .. 0.79
   5 ?    0.2   0.3       0.2   7.1e+02      99      99 ..     693     693 ..     631     785 .. 0.56

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.14
                 HHHHHHHHHHHHHHHHHHHHCCHHHHH CS
        Xpo1  77 rsnvqkilelllqileqsqskkqssel 103
                 +  +q+i++ll+  l+q q k+  +e 
  KHJ34372.1   2 APDFQTIVQLLQATLDQKQYKQ--AEA 26 
                 55699************99876..333 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00027
                 HHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCT..HHH CS
        Xpo1   4 lrnklaealaelflqeypnnWpsffddllsllsss.psg 41 
                 l+++l e+++ ++  ++  +W +++ddl+s+l+++ p+ 
  KHJ34372.1 102 LQTQLGETISLIADSDFWTKWDTLVDDLVSRLTPDnPKI 140
                 89*****************************99952433 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.55
                 HHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCT. CS
        Xpo1   4 lrnklaealaelflqeypnnWpsffddllsllsss 38 
                 ++n l  ++ +l +q+ p  +++ ++d++ ll++ 
  KHJ34372.1 206 VMNLLVKLFYDLSCQDLPPIFEENISDITVLLHKY 240
                 56777788899999999999999999999998875 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.15
                 HHTTTTSTTHHHHHHHHHCT.HHHHHHHH CS
        Xpo1  18 qeypnnWpsffddllsllssspsglelll 46 
                 q+  ++W  +f+ l+++l ss +++  + 
  KHJ34372.1 489 QLTKAQWTAAFPPLVKNLASSSNVVYTYA 517
                 55567899999999988888876665554 PP

  == domain 5  score: 0.2 bits;  conditional E-value: 0.2
                 H CS
        Xpo1  99 q 99 
                 +
  KHJ34372.1 693 E 693
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (965 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.70u 0.29s 00:00:00.99 Elapsed: 00:00:00.47
# Mc/sec: 6231.34
//
Query:       KHJ34373.1  [L=1594]
Description: putative gtpase activating protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.6e-115  384.8   9.4   6.6e-115  384.8   9.4    2.0  2  DUF3384   Domain of unknown function (DUF3384)
    7.7e-54  182.1   0.0    1.6e-53  181.1   0.0    1.6  1  Rap_GAP   Rap/ran-GAP
    1.1e-43  149.7  19.4    2.1e-43  148.8   5.2    3.8  5  Tuberin   Tuberin
  ------ inclusion threshold ------
       0.45   10.8   2.0       0.57   10.5   0.1    2.2  2  GPR15L    G-protein coupled receptor ligand 15


Domain annotation for each model (and alignments):
>> DUF3384  Domain of unknown function (DUF3384)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  384.8   9.4  1.5e-118  6.6e-115       2     478 ..      77     545 ..      76     547 .. 0.94
   2 ?   -1.4   0.3      0.19   8.4e+02     352     422 ..     879     971 ..     824    1012 .. 0.74

  Alignments for each domain:
  == domain 1  score: 384.8 bits;  conditional E-value: 1.5e-118
                 HHHHHHHHHHHHHHHH-TTS--HHHHHHHHHHHSTTS-HHHHHHHHHHHHHHC.T-TT--HHHHHHHHHHHHS.....S--GGGHHHHHHHHHHHCTTT CS
     DUF3384   2 rqRikaaraLaaaverysldsvaevWrlakdLltaeqpqelRiaglnLltacvkkdqelsaieRalfFrlilsrkndesseiddlplqLeaLevLTkdG 100
                 ++R++aa++L+ a+++ +++ +  + + akdL+++ +++++R +g++Ll+ac+ + ++ls+ eR+++Fr ++s    + s+ +d++  L+a++ LT++G
  KHJ34373.1  77 ADRVAAAESLRFAIQQHPVNGLSFILKGAKDLIDPVNSKKARTTGFELLIACI-QNTSLSDPERLAYFRILTS----Q-SKEEDFHWKLAAIIRLTRNG 169
                 78***************************************************.99*****************....4.46678*************** PP

                 T--TT-TTTHHHHHHHHHHHHHHHH..H---------------HHHHHHHHHHHHHHHHHHHHGGGS-HHHHHHHHHHHHHHHCS-S-HHHHHHHHHHH CS
     DUF3384 101 rdiegfeyeilplLtrwldealaskdnadeaakqqtkaisqlsseernlqqllqlltdilkfnfarldeseveslirsaleicigtsnaddlrsclkll 199
                 rd++gf+yeilp+Lt wl++ +     +  +++++ +   +  s+e +l+ l++l+ di+kfnf++ +e+++ ++i+ +l+i i+t++ dd+rsc++++
  KHJ34373.1 170 RDLTGFHYEILPVLTAWLRQTW-----VTTSSHRKHECGIASLSQETDLALLFELIYDIVKFNFNISNEQDIGNIIEALLSILIRTQTSDDIRSCINVF 263
                 **********************.....44455555555556667889**************************************************** PP

                 HHHHHHS---HHHHHHHHHHHHHHHHH-GG....GHHHHHHHHHHHHCSTCHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHHHHHHHHTT--T..T- CS
     DUF3384 200 daiiryghlPsasldvvikvLCsiycridsndddlqkevwrilsnllkshvgnaairslldiLtdpseakaaqkedpavlrGAvevlrllllssk..gq 296
                 dai++yg++P+++l +++kvLCs+y   d     +q+evw+++sn++ sh+g +air++++++++p      +k+   ++rGA+ +l++l+l+++    
  KHJ34373.1 264 DAIVTYGDVPNSKLMSCVKVLCSVYFNSDV---GVQQEVWKTISNIYISHNGGNAIRIIFKLIREPYL---GTKQALYEIRGALMILEKLFLKNGksC- 355
                 ************************998666...9**********************************...*********************888544. PP

                 -......---HHHHHHHHHHHHCS--HHHHHHHHHHHHHHH--------GGGTTS--HHHHHHHHHCCTTTEE------------G..........E-H CS
     DUF3384 297 pedalapslslalllpalraalkrqsdvldlevlqlisdlLpsasvsrdkllaesdWdalldlliecsrrledlkeedkassssee..........eks 385
                       p ++++ l+++l+     ++  ++ ++l+li +lL+++   ++k+  e++W+ ++d++++c+ ++ ++++  + +++se+          +  
  KHJ34373.1 356 -----YPLVPFSILIKSLERLSIVDNVIIKNDILRLILSLLSNEGKDISKNVMEEEWNLMFDVIRKCAYQILESPRCLTIEHNSETkcsvcnnyenNFV 449
                 .....56***************************************************************99998666656666669******988788 PP

                 HHHHHHHHHHHHHHHHHH...HGGGSTTHHHHHHHHHHHH-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     DUF3384 386 slaaelssllssleslle...sgedsgqkekliafflevssalpdstaeavLkyldkerlcspsnedWlenlkklldsFfknrkrssevRllalkv 478
                 sla++l++l++++esll    +++d+ q  ++++f++  +++lp+++a++v++++ + r c+ps+ dW+enl +ll+sFf nrk s+++Rl+alk+
  KHJ34373.1 450 SLAENLQNLIARIESLLLqhsKNTDFFQWLDCVKFLVSFHQHLPETCARLVIDIFIEYRFCYPSDLDWKENLTLLLRSFFHNRKNSTQTRLYALKA 545
                 99**************9989889**********************************************************************996 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.19
                 --HHHHHHHHHCCTTTEE------------G.......................E-HHHHHHHHHHHHHHHHHHHHGGGSTTHHHHHHHHHHHH CS
     DUF3384 352 dWdalldlliecsrrledlkeedkassssee.......................eksslaaelssllsslesllesgedsgqkekliafflevs 422
                 dW+++  ++ + +++l+++    +a  + ++                       +ks++  +l+++l+ l s  + +      ++++++f++  
  KHJ34373.1 879 DWEIFSYIIVHLHSQLMNQALFMAAIPQIKNlrevlcdqiktnkiqeppiisglRKSDILLCLFQILNALMSYHK-HFSKSEEDEIVRIFVHGV 971
                 666666666666666666553333333333366666666666666677788888889999999999888888887.888888888888877654 PP

>> Rap_GAP  Rap/ran-GAP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  181.1   0.0   3.5e-57   1.6e-53       1     186 []    1313    1512 ..    1313    1512 .. 0.94

  Alignments for each domain:
  == domain 1  score: 181.1 bits;  conditional E-value: 3.5e-57
     Rap_GAP    1 ilsNeevSkrfeeFlelLGekvelkgfkgYsggLdtkknttGehsvytkdrnleimFhVstllpt.kesdkqqlerkrhigndivvIvFnesgekef 96  
                  ilsN ++S+++++Fl  LG++ +l+g++++++gLd++++++Ge++++++dr +ei+FhVst +pt  e+d+q+ ++k+hignd+v+I+Fn+sg  +f
  KHJ34373.1 1313 ILSNIQGSSDYTKFLFGLGTLTKLRGANFNTQGLDRQTDSDGEYTFCWRDRVTEIVFHVSTQMPTdLENDPQCSNKKKHIGNDFVNIIFNNSG-LPF 1408
                  79***99******************************99*************************9889***********************99.999 PP

     Rap_GAP   97 dpsliksqfnhvfivvqpl.......ek..ekskeelyrvsvvskksvppfgPllpeekivskkslaelvrflltkainaeraal.........kas 175 
                    ++++s fn+v+iv++p        ++  ++ ++  y+v+v+sk+++p+++P+  e+ki s ++l++++r +    +na+ ++l         + s
  KHJ34373.1 1409 GFNTFPSAFNFVNIVISPEtkltfvaQRlkPDMDDAIYKVQVMSKPGFPEISPA-AETKILSLSTLPDFIRLV---SLNASVFSLawahraggeHFS 1501
                  9999*************5445555541156899*********************.8*****************...*****************559* PP

     Rap_GAP  176 sfrerlertrk 186 
                  ++r+rl+++rk
  KHJ34373.1 1502 PWRSRLREIRK 1512
                  *******9985 PP

>> Tuberin  Tuberin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.48   2.2e+03     143     202 ..     205     259 ..     191     265 .. 0.66
   2 ?   -2.9   0.1      0.62   2.8e+03     178     241 ..     447     504 ..     435     507 .. 0.62
   3 ?   -1.7   0.1      0.28   1.2e+03     137     161 ..     568     592 ..     534     595 .. 0.84
   4 !  148.8   5.2   4.8e-47   2.1e-43      91     327 ..     818    1053 ..     796    1057 .. 0.87
   5 !    9.8   0.1   8.7e-05      0.39     332     351 ..    1101    1120 ..    1094    1121 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.48
     Tuberin 143 kclkeekdwkvLklvLkelpklLqnkaLilsksgndidsLasaLcklvsdkklsekLkst 202
                  +l +e+d + L  ++ ++ k      + +s +++di ++++aL++++  +++s++++s 
  KHJ34373.1 205 ASLSQETDLALLFELIYDIVKF----NFNIS-NEQDIGNIIEALLSILIRTQTSDDIRSC 259
                 5566666655544444444333....23333.5689999999999999888888877765 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.62
     Tuberin 178 didsLasaLcklvsdkklsekLkstpekfsrtdlqalvlpvLaalvsYhesLdkstqqelvkcl 241
                 +  sLa++L +l++  +         +  ++td+ +     ++ lvs+h++L ++  + +++++
  KHJ34373.1 447 NFVSLAENLQNLIARIESL-----LLQHSKNTDFFQWL-DCVKFLVSFHQHLPETCARLVIDIF 504
                 4555666666666544433.....22334566666654.4457899999999888888777765 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.28
     Tuberin 137 afkvilkclkeekdwkvLklvLkel 161
                  +++ilk +  e+d  vL+ v++ +
  KHJ34373.1 568 FVNLILKDVRDEEDILVLQEVMSLI 592
                 5789*****************9866 PP

  == domain 4  score: 148.8 bits;  conditional E-value: 4.8e-47
     Tuberin   91 pyllvdskeeeale....kksqlelseestseaestqtpsskvttlsikeafkvilkclkeekdwkvLklvLkelpklLqnkaLilsksgndidsLa 183 
                  ++l ++ ke ++++    +ksq +++ e  s  ++++ ++ +   l+i++ +k++ + ++++ dw+++  ++ +l + L n+aL++++   +i++L 
  KHJ34373.1  818 SFLNFEDKEAKETRdtslTKSQKTTTGEIMS--NQNNDKEDQPSLLDIAKYIKLVTRLIQKDCDWEIFSYIIVHLHSQLMNQALFMAA-IPQIKNLR 911 
                  4666777766665533333444444444333..3446788999*******************************************76.688***** PP

     Tuberin  184 saLcklvsdkklsekLkstpekfsrtdlqalvlpvLaalvsYhesLdkstqqelvkclesglkskcakqcvvalticllemrdvlikllpevllkLs 280 
                  ++Lc  ++ +k++e    + ++++++d+ ++ +++L al+sYh++++ks++ e+v+++ +g+ +k++k c+ al+ic+ e++  + k+l ++l k+s
  KHJ34373.1  912 EVLCDQIKTNKIQE--PPIISGLRKSDILLCLFQILNALMSYHKHFSKSEEDEIVRIFVHGVGEKTSKCCIHALSICCHELPGSTSKMLVSILTKFS 1006
                  *******9999973..566689*************************************************************************** PP

     Tuberin  281 kisatvtlAipvLefLstLvrlpklysnfveeqymsvfaillpytnp 327 
                  +i    ++Ai +LefL  L rlpkly nf ee+y+ vfai++ y + 
  KHJ34373.1 1007 QIITQSHVAIHILEFLACLARLPKLYVNFREEEYRIVFAICFRYLQY 1053
                  *****************************************999765 PP

  == domain 5  score: 9.8 bits;  conditional E-value: 8.7e-05
     Tuberin  332 hYiVslahhviavWFlkcrl 351 
                  +Y+ +lahhvi  WFl  +l
  KHJ34373.1 1101 EYVYALAHHVIIFWFLSLKL 1120
                  699*************9887 PP

>> GPR15L  G-protein coupled receptor ligand 15
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   0.00013      0.57      12      65 ..     383     443 ..     370     450 .. 0.82
   2 ?   -2.6   0.3       1.5   6.8e+03      36      47 ..     982     993 ..     969     999 .. 0.70

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00013
      GPR15L  12 iLllClsvfsaeGrklpakvakerk......lrpC.CkrvprlkllnlkgrhvrlCrpckl 65 
                 iL l ls++s eG+  +++v++e+       +r+C  + +++++ l+   +    C  c+ 
  KHJ34373.1 383 ILRLILSLLSNEGKDISKNVMEEEWnlmfdvIRKCaYQILESPRCLTIEHNSETKCSVCNN 443
                 78899**************9887666889999***66667778888888888888988874 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.5
      GPR15L  36 klrpCCkrvprl 47 
                  l +CC+++p +
  KHJ34373.1 982 ALSICCHELPGS 993
                 466799988865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1594 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       819  (0.0456802); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.94u 0.31s 00:00:01.25 Elapsed: 00:00:00.50
# Mc/sec: 9667.88
//
Query:       KHJ34374.1  [L=237]
Description: putative iron-sulfur cluster assembly 2 like mitochondrial [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.8e-14   51.5   0.0    3.2e-06   27.3   0.0    2.3  2  Fe-S_biosyn  Iron-sulphur cluster biosynthesis


Domain annotation for each model (and alignments):
>> Fe-S_biosyn  Iron-sulphur cluster biosynthesis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.0   1.8e-10   3.2e-06       1      61 [.      91     146 ..      91     159 .. 0.86
   2 !   22.1   0.0   7.1e-09   0.00013      65     110 ..     186     231 ..     159     232 .. 0.86

  Alignments for each domain:
  == domain 1  score: 27.3 bits;  conditional E-value: 1.8e-10
                  -EEEE-HHHHHHHHHHHHCTTEC...EEEEEECCTSCCGGS.TT.EEEEEEEEESSTSTTTEEE CS
  Fe-S_biosyn   1 mkitlteaAaeklkkllaedkke...lrLdvddgggpyskggCsiggkyslvlvdeedeeydev 61 
                  mki++t++A ++lk+ +++d+++   lr++v +gg       C+ g++y + l++ + +  ++v
   KHJ34374.1  91 MKIEITPRASNRLKEIMSQDSNPnlaLRIKVVNGG-------CH-GFQYLMSLTTLPSDINSTV 146
                  9********************99***********9.......**.******9999775444444 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 7.1e-09
                  TTEEEEEEGGGHHHS.TTEEEEEEEETTEEEEE.EETCCEEEEEEEE CS
  Fe-S_biosyn  65 nggkvyvksyslvfldeglvldfvedlgtlgLk.sdngilddnvglg 110
                   g kv+++ +sl++l +g ++d++ +l ++++k  dn+++++++g+g
   KHJ34374.1 186 TGAKVVINASSLEVL-KGSKIDYTMELIGSQFKiVDNPLATSSCGCG 231
                  3568***********.9****************99***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       487  (0.0271627); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1721.09
//
Query:       KHJ34375.1  [L=330]
Description: putative prephenate dehydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.7e-56  188.5   0.0    1.4e-55  188.0   0.0    1.2  1  PDT       Prephenate dehydratase
    1.7e-06   27.7   0.0    0.00013   21.6   0.0    2.4  2  ACT       ACT domain
     0.0012   19.4   0.0       0.27   11.9   0.0    2.3  2  ACT_4     ACT domain
  ------ inclusion threshold ------
       0.61   10.3   5.0        4.6    7.5   0.0    3.9  6  CHCH      CHCH domain


Domain annotation for each model (and alignments):
>> PDT  Prephenate dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.0   0.0   3.1e-59   1.4e-55       1     182 [.      16     232 ..      16     233 .. 0.97

  Alignments for each domain:
  == domain 1  score: 188.0 bits;  conditional E-value: 3.1e-59
                 EEEES-TTSHHHHHHCCCS.....EEEEES-HHHHHHHHCTTS-SEEEEEEEESSS-B-HHHHHHHHH.SS....EEEEEEEEEE---EEEE-TT-... CS
         PDT   1 vaylGpegtyshqAalkvfkaedvelipvasieevfeavekgeadyavvPiENsteGsVnetlDlLlkesd....lkivgEvvlpiehcLlakpkt... 92 
                 v ylGp+ +y+hqAal+ ++ ++ e+ p +si+++fe+v++g a+++v+PiENst+G+V  + +lL+++++    ++i++E++l+++h+Ll++++    
  KHJ34375.1  16 VTYLGPPSSYTHQAALQCLDFDSYEFQPSTSISDIFESVQSGAAELGVIPIENSTNGPVILSFELLADRENlypnVNICKETYLKVSHYLLGRQSPpqi 114
                 78******************************************************************8856666****************9999899* PP

                 ............................-TTT--EEEE-HHHHHHTHHHHHH-.TTSEEEE-S-HHHHHHHHHHCT-TTEEEEE-HHHHHHTT-EEEEC CS
         PDT  93 ............................kleeikkvyShpqalgQcrkfLeehlpqvervavestaeAakkveassdkdaaaiasevaaelyglkvlee 163
                                             ++++ik +yShpq++gQc+ fL+++++++ r++++st+ Aa+ v ++++ + aaias++a +l +l++l+e
  KHJ34375.1 115 ndspvmsgvctpstatplpsmprsaplcSIKHIKCLYSHPQVWGQCEVFLTTYFKGIDRIDTSSTSMAAHLVCQDRTGTSAAIASKLASKLNNLDILAE 213
                 *************************************************************************************************** PP

                 S-SS-S--EEEEEEEEETT CS
         PDT 164 niedkknntTRFlvlakee 182
                 +ied+++ntTRFlvl k++
  KHJ34375.1 214 EIEDDQDNTTRFLVLCKDK 232
                 ***************9875 PP

>> ACT  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0     0.013        59       6      22 ..     186     202 ..     185     204 .. 0.90
   2 !   21.6   0.0     3e-08   0.00013       1      64 [.     244     313 ..     244     316 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.013
                 EEESSTTHHHHHHHHHH CS
         ACT   6 gvpDrPGlLarvfgala 22 
                  ++Dr G+ a++++ la
  KHJ34375.1 186 VCQDRTGTSAAIASKLA 202
                 59***********9998 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 3e-08
                 EEEEEEEESSTTHHHHHHHHHHHTTSEEEEEEEEEESTT......ECEEEEEEEEEEHHHHHHHHHHHHT CS
         ACT   1 tvlrvgvpDrPGlLarvfgaladrgiNidsieqrssedk......vagivfvvivvdeedleevlealkk 64 
                 t+++++v+ + G+La v+  +a+  +N++si++r+++ k      + ++  +     e+ ++++leal++
  KHJ34375.1 244 TMISFEVQHENGALASVLDCFAKSSLNLTSINSRPTKAKpfqyifFLEFQGSLYNDPEKKVKNTLEALQE 313
                 689************************************9888888888888888888888888888886 PP

>> ACT_4  ACT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.1   0.1    0.0077        34      10      50 ..     184     225 ..     177     229 .. 0.87
   2 !   11.9   0.0     6e-05      0.27       7      48 ..     244     284 ..     239     292 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0077
       ACT_4  10 eveaedrkglLaditqvisee..kanivsvnaktrkkdglaei 50 
                 +++++dr+g  a i++ ++++  + +i + ++++++ d+++++
  KHJ34375.1 184 HLVCQDRTGTSAAIASKLASKlnNLDILAEEIEDDQ-DNTTRF 225
                 6789**************999889999999999987.878775 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 6e-05
       ACT_4   7 vrleveaedrkglLaditqviseekanivsvnaktrkkdgla 48 
                 + ++ e++ ++g+La++++ ++++  n++s+n++ +k+ + +
  KHJ34375.1 244 TMISFEVQHENGALASVLDCFAKSSLNLTSINSRPTKA-KPF 284
                 6799999***************************9874.444 PP

>> CHCH  CHCH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1     0.064   2.9e+02       5      19 ..      27      41 ..      25      43 .. 0.85
   2 ?    7.5   0.0     0.001       4.6       8      29 ..     146     167 ..     145     169 .. 0.83
   3 ?   -2.4   0.0       1.3   5.8e+03       5      15 ..     181     191 ..     179     194 .. 0.79
   4 ?   -3.3   0.0       2.5   1.1e+04      14      26 ..     220     233 ..     219     234 .. 0.71
   5 ?   -3.8   0.0       3.5   1.6e+04       9      16 ..     261     268 ..     260     270 .. 0.75
   6 ?   -0.7   0.0      0.39   1.7e+03       6      13 ..     312     319 ..     309     322 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.064
                HHHHHHHHHHCTSST CS
        CHCH  5 fkeylkClkdnsdef 19
                ++++l+Cl+  s+ef
  KHJ34375.1 27 HQAALQCLDFDSYEF 41
                689******999886 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.001
                 HHHHHHHCTSSTTTTHHHHHHH CS
        CHCH   8 ylkClkdnsdefskCrkefeaf 29 
                 ++kCl+++ + +++C  +++ +
  KHJ34375.1 146 HIKCLYSHPQVWGQCEVFLTTY 167
                 79*************8776666 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 1.3
                 HHHHHHHHHHC CS
        CHCH   5 fkeylkClkdn 15 
                 + ++l C++  
  KHJ34375.1 181 MAAHLVCQDRT 191
                 88999999876 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 2.5
                 HCTSS.TTTTHHHH CS
        CHCH  14 dnsde.fskCrkef 26 
                 dn+ +   +C++ f
  KHJ34375.1 220 DNTTRfLVLCKDKF 233
                 56666677899876 PP

  == domain 5  score: -3.8 bits;  conditional E-value: 3.5
                 HHHHHHCT CS
        CHCH   9 lkClkdns 16 
                 l+C+ ++s
  KHJ34375.1 261 LDCFAKSS 268
                 68988876 PP

  == domain 6  score: -0.7 bits;  conditional E-value: 0.39
                 HHHHHHHH CS
        CHCH   6 keylkClk 13 
                 +ey +C++
  KHJ34375.1 312 QEYVRCWR 319
                 7999**97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2532.64
//
Query:       KHJ34376.1  [L=494]
Description: putative hydroxyacyl-thioester dehydratase type mitochondrial [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       687  (0.0383178); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.37
# Mc/sec: 3978.05
//
Query:       KHJ34377.1  [L=1187]
Description: putative leucine rich repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.031   14.3   2.5         12    6.2   0.0    5.4  6  LRR_6     Leucine Rich repeat


Domain annotation for each model (and alignments):
>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0   0.00068        12       5      23 ..     656     674 ..     654     674 .. 0.89
   2 ?   -2.2   0.0      0.35   6.2e+03       1      13 [.     681     693 ..     681     694 .. 0.90
   3 ?   -1.6   0.1      0.22   3.9e+03       3      12 ..     710     719 ..     710     720 .. 0.85
   4 ?    1.9   0.0     0.016   2.9e+02       1      12 [.     853     864 ..     853     873 .. 0.88
   5 ?   -0.1   0.0     0.072   1.3e+03       2      12 ..     886     896 ..     885     896 .. 0.91
   6 ?   -2.6   0.2      0.47   8.4e+03       1      20 [.     919     938 ..     919     941 .. 0.79

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.00068
       LRR_6   5 LteLdLsgNdIgDeGaeaL 23 
                 +++ + s+++++D G++ L
  KHJ34377.1 656 MRAIEFSHCGLTDRGIMQL 674
                 788999*********9986 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.35
       LRR_6   1 snthLteLdLsgN 13 
                 +n +++  + sgN
  KHJ34377.1 681 QNKTIEVINFSGN 693
                 5999********9 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.22
       LRR_6   3 thLteLdLsg 12 
                 t++++L+Ls 
  KHJ34377.1 710 TNIRSLNLSR 719
                 689*****95 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.016
       LRR_6   1 snthLteLdLsg 12 
                 snt+++ Ld+s 
  KHJ34377.1 853 SNTTIRCLDISK 864
                 69********95 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 0.072
       LRR_6   2 nthLteLdLsg 12 
                 n++L eLd+sg
  KHJ34377.1 886 NQTLDELDISG 896
                 99*******96 PP

  == domain 6  score: -2.6 bits;  conditional E-value: 0.47
       LRR_6   1 snthLteLdLsgNdIgDeGa 20 
                 sn++L+ L + + ++g eGa
  KHJ34377.1 919 SNNTLKLLRIEYQNLGLEGA 938
                 69999999888777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.27s 00:00:01.00 Elapsed: 00:00:00.42
# Mc/sec: 8395.73
//
Query:       KHJ34378.1  [L=242]
Description: hypothetical protein EV44_g3349 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-27   94.7   0.1    7.4e-27   94.3   0.1    1.1  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.3   0.1   4.2e-31   7.4e-27      62     219 ..      20     200 ..       2     203 .. 0.86

  Alignments for each domain:
  == domain 1  score: 94.3 bits;  conditional E-value: 4.2e-31
                 HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET..........................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T.... CS
       RVT_1  62 lkkkkkaklllklDlkkaFdsvpleellrkltafkvptklinliksflstrsfsvrv.ngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrak 159
                 +++kkk   +l+l +++aFd+v++++l + l   ++p++++  i+sfl++rs+++ + +  +  ++ +++g+pqGs lSP+lf ++ + +l  l+++  
  KHJ34378.1  20 NDNKKKVASILSLNISGAFDNVSHQRLVHNLRGKGIPSWMTTFIESFLKERSTAIVLgSF-KRDQIQTSTGIPQGSFLSPILFIFLASTILPTLQTA-- 115
                 46778889********************************************99999555.55*********************************7.. PP

                 ..TEEECTTEEEEEESSHHH......HHHHHHHHHHHHHHTT--BEGGG-EEE........................ESSEEETT CS
       RVT_1 160 gvtllrYaDDililskskee......lqelleaveewlkesglkinpeKtklvlft..................v.kseevkyLG 219
                     + ++DD+ il+ s +       lq+l e++e++++ +g+k++p+K +l++f                      + ++++LG
  KHJ34378.1 116 TSSAVGFVDDTNILTWSDTTkencqrLQQLHEKCESRARTHGIKFAPNKYQLMHFSrarnkhnmqapiiiqshlTnPQISLRILG 200
                 7*************999666689*******************************9987777777666666555424555666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 1958.22
//
Query:       KHJ34379.1  [L=735]
Description: hypothetical protein EV44_g3385 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-39  135.3   0.0    3.7e-39  134.5   0.0    1.4  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
      0.054   12.6   0.0      0.099   11.8   0.0    1.3  1  DUF787    Borrelia burgdorferi protein of unknown function (D


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.5   0.0   4.1e-43   3.7e-39       5     220 ..     257     509 ..     253     511 .. 0.90

  Alignments for each domain:
  == domain 1  score: 134.5 bits;  conditional E-value: 4.1e-43
                 T.......S-EEE......-THHHHCTB--...........-------HHHH................HC..CHTS--EEEEEEBCCGCCCSBB-GGGG CS
       RVT_1   5 g......pgsyRpisllsvdykalnkliakrLkdvl..ekllsenqpgfrpgrstldav...edllkalk..kkkkaklllklDlkkaFdsvpleellr 90 
                 +      p+syRpi+ll++ +k+l+kl+a+r+++++   +ll+ +q+g rp+rst+ av   ++l ++++  +k++   ll+lD+++aFd+ ++e+l++
  KHJ34379.1 257 QkprydtPKSYRPIALLNTMGKLLEKLVANRISKAAeeFNLLPGEQMGARPKRSTISAVellTELIHTIWgkDKRQVASLLSLDISGAFDNMSHERLIH 355
                 34457789****************************999***********************666666651144555889******************* PP

                 GGG-EEET..........................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHH......HHH CS
       RVT_1  91 kltafkvptklinliksflstrsfsvrv.ngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskee......lqe 182
                  + + ++p+++ + + sfl++r++sv + + +    +++++ +pq s lSP+lf +f++ ll +l++r  +   + ++DD+ il+ s++       l+e
  KHJ34379.1 356 NMRQKGIPKWISQFVVSFLEGRTTSVVLgTFKG-DLIPTNTDIPQRSSLSPILFLFFVSTLLPMLQSR--STAAVGFVDDTNILTWSNTTeencrkLEE 451
                 ****************************55555.*********************************8..9*************99977779******* PP

                 HHHHHHHHHHHTT--BEGGG-EEE.........................ESSEEETTE CS
       RVT_1 183 lleaveewlkesglkinpeKtklvlft...................v.kseevkyLGv 220
                   e++e+w+k +g+k++peK +l++ft                      ++++++LG 
  KHJ34379.1 452 QHEICERWAKTHGVKFAPEKYQLMHFTrarkkkhnleatikiqgqlTkPQSSLRVLGT 509
                 ***************************9999988888888887764268888888885 PP

>> DUF787  Borrelia burgdorferi protein of unknown function (DUF787)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.1e-05     0.099     270     318 ..     316     362 ..     311     369 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.1e-05
      DUF787 270 eaikelir.iwnknnransklsalqldgaldneytaalecllkrlkdkgl 318
                 e + eli  iw k+ r+ + l +l+++ga dn    + e l++++++kg+
  KHJ34379.1 316 ELLTELIHtIWGKDKRQVASLLSLDISGAFDNM---SHERLIHNMRQKGI 362
                 5678999559**********************6...56899999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (735 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       617  (0.0344135); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 5019.58
//
Query:       KHJ34380.1  [L=228]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.6e-05   22.8   0.4    6.6e-05   22.8   0.4    2.8  3  zf-CCHC        Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.4   3.7e-09   6.6e-05       2      17 ..      53      68 ..      52      69 .. 0.95
   2 ?   -4.4   1.8         1   1.8e+04       5       8 ..      72      75 ..      72      76 .. 0.61
   3 ?   -0.2   1.0     0.068   1.2e+03       3       8 ..      93      98 ..      92      99 .. 0.81

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 3.7e-09
                CTSSSSSSSSTTTTST CS
     zf-CCHC  2 kCynCGepGHiardCp 17
                +C++C++ GHia+ C+
  KHJ34380.1 53 QCFKCQRYGHIAKICT 68
                7**************8 PP

  == domain 2  score: -4.4 bits;  conditional E-value: 1
                SSSS CS
     zf-CCHC  5 nCGe 8 
                +CG+
  KHJ34380.1 72 KCGK 75
                5774 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.068
                TSSSSS CS
     zf-CCHC  3 CynCGe 8 
                C nCG+
  KHJ34380.1 93 CINCGK 98
                88***7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       646  (0.036031); expected 358.6 (0.02)
Passed bias filter:                      246  (0.0137208); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1636.99
//
Query:       KHJ34381.1  [L=2432]
Description: putative phosphatidylinositol 3-kinase tor2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     6e-130  433.5   1.1     6e-130  433.5   1.1    2.1  2  FAT              FAT domain
      3e-71  240.2   0.2    6.1e-71  239.2   0.2    1.6  1  PI3_PI4_kinase   Phosphatidylinositol 3- and 4-kinase
    1.5e-66  223.2   6.7    1.2e-62  210.5   1.1    4.7  4  DUF3385          Domain of unknown function (DUF3385)
    1.5e-44  150.4   5.7    2.5e-44  149.7   0.0    3.9  3  FRB_dom          FKBP12-rapamycin binding domain
    1.6e-14   54.0   9.8     0.0098   16.3   0.0    9.1 10  HEAT_2           HEAT repeats
    3.7e-13   48.5  10.6      0.007   16.5   0.0   10.8 10  HEAT             HEAT repeat
    1.1e-12   48.1   6.9     0.0014   19.1   0.0   10.2 10  HEAT_EZ          HEAT-like repeat
    2.6e-11   43.1   0.2    7.9e-11   41.6   0.2    1.8  1  FATC             FATC domain
    2.6e-08   34.1   1.8     0.0063   16.6   0.0    6.9  7  Cnd1             non-SMC mitotic condensation complex subunit
    9.7e-07   27.7   5.5     0.0001   21.1   0.1    4.2  5  Adaptin_N        Adaptin N terminal region
    0.00031   20.4   0.2        2.2    7.8   0.0    4.6  4  CLASP_N          CLASP N terminal
  ------ inclusion threshold ------
      0.015   15.2   2.7         16    5.8   0.0    4.0  3  TPR_7            Tetratricopeptide repeat
       0.17   12.0   0.2       0.89    9.8   0.0    2.3  2  VirDNA-topo-I_N  Viral DNA topoisomerase I, N-terminal
       0.64   11.0  11.7         35    5.6   0.1    5.1  3  TPR_14           Tetratricopeptide repeat
       0.64   10.3   7.6        3.6    7.9   0.2    3.8  3  ANAPC3           Anaphase-promoting complex, cyclosome, subun
       0.65    9.9   6.3         18    5.2   0.0    5.0  6  Sec7_N           Guanine nucleotide exchange factor in Golgi 
        1.4    9.4   5.4        5.7    7.5   0.2    3.8  2  TPR_19           Tetratricopeptide repeat
        8.5    6.8  15.1       0.75   10.1   0.6    4.6  3  TPR_2            Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> FAT  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.2       2.9   2.9e+03      77     254 ..    1343    1353 ..    1252    1370 .. 0.48
   2 !  433.5   1.1    6e-133    6e-130       1     346 []    1376    1776 ..    1376    1776 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.9
                  HHHCCCCCHHHCHHCCHHCSS----TTTTTTT----TTS-TTTGCCCTTTCCCCTCCCHCCCHCHCCS-STTCCCCCCCCHCHHHHCCSTTHHCCCC CS
         FAT   77 vlvrvQmlaEleeiiqykqklssseklksllktWrkRlpgcqdnvevwqdiltvRslvlspiedllkgvkaemwlkfanlarksgrlslAekaLkel 173 
                  +                                                                                                
  KHJ34381.1 1343 K------------------------------------------------------------------------------------------------ 1343
                  1................................................................................................ PP

                  CHCTT.....TT.TSSCCCHHHHHHHCCHHHHHSSCCHHHHCCTSSCCCSS-SS---............HHHHCCCTCCCC CS
         FAT  174 leedpeewlprappevvyaylKylwssgeqkealqkLreftsellekkeelqsgleaqkeptnleeftkllarcylkkGew 254 
                                                                                         ++c++ +Gew
  KHJ34381.1 1344 -----------------------------------------------------------------------MKCFHALGEW 1353
                  .......................................................................3444444444 PP

  == domain 2  score: 433.5 bits;  conditional E-value: 6e-133
                  CCCTTCCCCTSSSGHHCCCCT....TSSSS--CCCHCCCCHH--CCHCHHCCCHCCCCCCCCCTS---SCCCCCHHHHHCCCCCHHHCHHCCHHCSS CS
         FAT    1 aplaaeaaWrlgqWdsmeeylsvlkkdspdkaffeailalhrnqfdeakeliekarqlldtelsalvgesynraygvlvrvQmlaEleeiiqykqkl 97  
                  apla++aaW+lgqWd+m++yl v+k + pd++ff+ailalhrnqf+ea ++i+kar++ldtelsa v+esynray+v+vrvQmlaEleeii ykq++
  KHJ34381.1 1376 APLATAAAWGLGQWDLMDDYLGVMKANIPDRSFFGAILALHRNQFREATKFIQKAREGLDTELSAGVSESYNRAYTVVVRVQMLAELEEIIVYKQCS 1472
                  79*********************************************************************************************** PP

                  ----TTTTTTT----TTS-TTTGCCCTTTCCCCTCCCHCCCHCHCCS-STTCCCCCCCCHCHHHHCCSTTHHCCCCCHCTT..............TT CS
         FAT   98 ssseklksllktWrkRlpgcqdnvevwqdiltvRslvlspiedllkgvkaemwlkfanlarksgrlslAekaLkelleedp.........eewlpra 185 
                  +++ek+ ++++tW+kRl+gcq+nvevwq++l+vR+lv+sp+e+      ++m +kfanl+rksgr++l+ek+Lk+l+++d          +      
  KHJ34381.1 1473 NNPEKQGTMRNTWEKRLLGCQRNVEVWQRMLKVRALVISPKEN------MQMMIKFANLCRKSGRMGLSEKHLKMLIGTDLtldsvlptqS------ 1557
                  *******************************************......********************************9944444440...... PP

                  .T.........................SSCCCHHHHHHHCCHHHHHSSCCHHHHCCTSSCCC.......SS-SS---.................... CS
         FAT  186 pp.........................evvyaylKylwssgeqkealqkLreftsellekke.......elqsgleaq................... 231 
                                             +v+ya+lK+ w++g+q+ al+ L+ ft+ l++  +       +                           
  KHJ34381.1 1558 -TslgansnssrrldrrdhlvamrippPVQYAVLKFHWANGKQEAALNALQSFTKDLTDHLRavqiqaqT-------Vesldiqnslstngdgnipe 1646
                  .24555556666666666666677777********************************99865554440.......23455556666779999999 PP

                  .....................HHHHCCCTCCCCCCCCCCCT.S...-SSCCHHHHCCHHCTCCCHSTTCCCCHHHHHCCHHHHHHSSSS.....S-T CS
         FAT  232 ..........keptnleeftkllarcylkkGewqealqkldwseekieeilqsysaateidpswykawhtwalfnfevvskeeeqkeeee....ped 314 
                             + ++ +e+  llarcylk+Gewq al+k+dws+++++eil+sy+aa+ ++p+wykawh+wal+nfe+v++ +++ e+ +    p++
  KHJ34381.1 1647 lnpfigntqkFNVKQYAEYYVLLARCYLKQGEWQVALKKGDWSHDSVSEILDSYHAAANFNPNWYKAWHSWALANFEIVQAISKKGEVGNeiapPHN 1743
                  9999999888888899999999************************************************************666443337999999 PP

                  CC.HHHHCCT..CCHHHHTTTSSTTTCHHHHHC CS
         FAT  315 lq.eyvvpavkgflksislssenslqdtlRLLt 346 
                  l   yvv a++gf+ksisls+++slqdtlRLLt
  KHJ34381.1 1744 LTlSYVVAAINGFFKSISLSHGSSLQDTLRLLT 1776
                  999*****************************8 PP

>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.2   0.2   6.1e-74   6.1e-71       2     249 ..    2051    2299 ..    2050    2300 .. 0.99

  Alignments for each domain:
  == domain 1  score: 239.2 bits;  conditional E-value: 6.1e-74
                      EEEEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHHHHH.HHHHCH CS
  PI3_PI4_kinase    2 sagiykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekkgvpptasves.lrvald 93  
                      + +++k+++d rqde+++q+f+l+++++  +++  +r+l++++y +ipl++++g++++v++s+t++ l++e++e +++  ++++++ l++a+d
      KHJ34381.1 2051 YTFVLKGHEDIRQDERVMQLFGLCNTLMIHDSESCKRHLNIQRYPAIPLSQNSGLLGWVPNSDTLHVLIREYRESRKILLNIEHRImLQMAPD 2143
                      78999***********************************************************************99999999999999*** PP

                      CHCCHHHHHCC.HHHHHHTSSTTHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHT-TT--TTTEEEETTTSEEEESSTTTCCTCSHC CS
  PI3_PI4_kinase   94 kkklkkekklk.fekrtalkpksgllqeFvkkspsaeewlearkqFvrslaklsvldyilgngDRhldNilvdktsgklihIDfGlilpdewk 185 
                      +++l++++k++ f   + +++ ++l++ ++ ks+s e wle+r++++rsl ++s+++yilg+gDRh++N+++dk +g ++hIDfG++++ +++
      KHJ34381.1 2144 YDNLTLMQKVEvFGYAIDNTTGQDLYRVLWLKSKSSESWLERRTNYTRSLGVMSMVGYILGLGDRHPSNLMLDKVTGMIVHIDFGDCFEIAMH 2236
                      ********************************************************************************************* PP

                      SSSS-.SSSSSS-THHHHHHTSTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCSSC CS
  PI3_PI4_kinase  186 llpfpqekvPfrltrelvlaidpskdeglfresceealealrrdqnlltrllkkavkdglilwe 249 
                      + ++p e+vPfrltr+l +a++ s  eg fr +ce+++++lr++++ l+++l+++++d+l +w+
      KHJ34381.1 2237 REKYP-ERVPFRLTRMLTYAMEVSNIEGSFRITCENVMRVLRENKESLMAVLEAFIHDPLLNWR 2299
                      *****.********************************************************97 PP

>> DUF3385  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00035      0.35      27     158 ..     593     731 ..     580     732 .. 0.70
   2 !  210.5   1.1   1.2e-65   1.2e-62       1     161 []     736     896 ..     736     896 .. 0.99
   3 ?   -1.2   0.0       1.7   1.7e+03     110     141 ..     927     958 ..     918     974 .. 0.80
   4 ?    0.6   0.1      0.49   4.8e+02      77     156 ..     977    1053 ..     942    1056 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00035
     DUF3385  27 irrevikllGilGALDPykh.....kqveeraedkkrreeaaretdlsllmvglspsneeyyptvvinaLlril...kdpslsshhaavveaimnifkt 117
                 +r+ +ik++G l  + P  +     k++ +  ++ + +e a ++++ ++l+  l + +++ ++ +v   ++ +l   +d++  s  a++++ai      
  KHJ34381.1 593 VREIAIKIIGRLTHVNPAYVipslrKVLIQMLTELEFSEFARNKEESAKLLSLLVQNSQDLIKPYVDPMVAVLLpkaRDSN-PSVSATIITAIGDLAAV 690
                 677777888888777777665555433333333333333444444445555555666677777766666555555424444.46889************ PP

     DUF3385 118 lglkcvpfLdqiipallsvirtteesnlrefllqqLatLvs 158
                  gl++ p++++++p ++++++++ +   re  l+ L++L s
  KHJ34381.1 691 GGLEMKPYIEELMPIIIEALQDQGSIVKREAALRTLGQLAS 731
                 ***********************99999********99975 PP

  == domain 2  score: 210.5 bits;  conditional E-value: 1.2e-65
     DUF3385   1 VvdPyleypqLLelLlnilkte.qsqsirrevikllGilGALDPykhkqveeraedkkrreeaaretdlsllmvglspsneeyyptvvinaLlrilkdp 98 
                 V++Pyl+yp+LLe+L++i++te +++++r+e+ikl+GilGA+DPyk++qv + ++++++r e ++ td+sl+m g+ psn+ey+ptvvin+Ll ilkd+
  KHJ34381.1 736 VIKPYLDYPNLLEILQTIVRTEpHRGPLRQETIKLMGILGAIDPYKQQQVIGISSESQQRLEINQVTDISLMMSGINPSNKEYFPTVVINSLLPILKDQ 834
                 9*********************88****************************99999****************************************** PP

     DUF3385  99 slsshhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLatLvsivk 161
                 sl +hhaavveaimnif+tl+l+cvpfL+++ipa+++vir++++ + ++++++qL++Lv iv+
  KHJ34381.1 835 SLLQHHAAVVEAIMNIFRTLQLECVPFLEKVIPAFITVIRNAPA-TKLDSYFSQLSVLVGIVR 896
                 *****************************************988.*****************7 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 1.7
     DUF3385 110 aimnifktlglkcvpfLdqiipallsvirtte 141
                  i  i ++l+ +   +L +i+p +ls++++  
  KHJ34381.1 927 LIEAISRSLEGEFKIYLAKILPFMLSALEKDV 958
                 5778999999****************998643 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.49
     DUF3385   77 psneeyyptvvinaLlrilkdpsls.shhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLatL 156 
                  +s ee y + ++  ++ ++++p+     ++ ++e+i +i ++++l    f ++ii+ l +++   +  +lr   l+ L+ L
  KHJ34381.1  977 QSAEE-YMHLIVPVIVGVFEKPQQPtFIRKYAIETIGKISRQVNL--NDFASKIIHPLSRILGGNDV-TLRLAALDTLCLL 1053
                  33344.444455566777766665534566778888888886444..46777888888777776554.7777777777666 PP

>> FRB_dom  FKBP12-rapamycin binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1       2.1   2.1e+03       7      24 ..    1303    1323 ..    1298    1334 .. 0.72
   2 !  149.7   0.0   2.5e-47   2.5e-44       1      98 [.    1884    1981 ..    1884    1982 .. 0.99
   3 ?    0.1   0.3       1.1   1.1e+03      23      69 ..    2370    2417 ..    2365    2425 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 2.1
     FRB_dom    7 ilwhElwhegL...eeAsrly 24  
                  i+  E+w+e L   eeA + y
  KHJ34381.1 1303 ITLRETWFEKLerwEEALEFY 1323
                  88999****995555666655 PP

  == domain 2  score: 149.7 bits;  conditional E-value: 2.5e-47
     FRB_dom    1 ELiRvAilwhElwhegLeeAsrlyfgeknveamlklleplhellekgpetlreasFaqafgreLkeaeewlkkykkteneedlnqawdiyyevfrri 97  
                  ELiRvA+lwhElwhegLeeAsrlyfg++n+++m+++l plh++l+kgpetlre+sFaq+fgr+L+ea+ew+++y++t++ +d+nqawd+yy+vfrri
  KHJ34381.1 1884 ELIRVAVLWHELWHEGLEEASRLYFGDRNIDGMFATLAPLHNMLDKGPETLREISFAQTFGRDLQEAREWCDTYRSTGDVADINQAWDLYYQVFRRI 1980
                  9************************************************************************************************ PP

     FRB_dom   98 k 98  
                  +
  KHJ34381.1 1981 S 1981
                  7 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 1.1
     FRB_dom   23 lyfgeknveamlklleplhellekgp.etlreasFaqafgreLkeaee 69  
                   + +e + +  +++l++ +e+l+ +  ++ +e +F+++  r L ea +
  KHJ34381.1 2370 NFIQETQNARAMQVLHRVKEKLSGTDfKSNEELNFVSQVDRLLIEATK 2417
                  5667777788899*********9865479999******9999999875 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1       2.4   2.4e+03       5      28 ..      14      37 ..      10      45 .. 0.78
   2 ?    6.0   0.1     0.016        16      10      87 ..      66     163 ..      57     164 .. 0.71
   3 ?   -0.8   0.0         2     2e+03      40      57 ..     189     206 ..     185     242 .. 0.73
   4 ?   -2.5   0.0       7.3   7.3e+03       7      28 ..     273     294 ..     265     305 .. 0.71
   5 !    6.7   0.0    0.0096       9.6      29      54 ..     491     516 ..     473     525 .. 0.76
   6 !   15.6   0.0   1.6e-05     0.016       2      72 ..     543     621 ..     542     626 .. 0.83
   7 !   16.3   0.0   9.8e-06    0.0098       2      76 ..     663     759 ..     662     772 .. 0.66
   8 ?    0.5   0.0      0.81   8.1e+02      15      55 ..    1002    1050 ..     995    1056 .. 0.82
   9 ?   -1.7   0.0         4     4e+03      12      59 ..    1124    1174 ..    1113    1186 .. 0.57
  10 ?    2.9   0.0      0.15   1.5e+02       1      35 [.    1807    1840 ..    1800    1862 .. 0.58

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 2.4
      HEAT_2  5 lqalendpdpevrraairaLgrig 28
                +q l++  ++++rr+a+ +L ++ 
  KHJ34381.1 14 VQELKSRGSEDLRRRAALELRELV 37
                678888899999999999998765 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.016
      HEAT_2  10 ndpdpevrraairaLg..........rignpealpaLvellededpavRraaaeaLgai....g......dpealpaLkellddddddvvReaAaeaL 87 
                 + +dp+ r   i+aL            ++ ++  ++L+ +l+ +d a  + aa aLg+i    g       ++ ++  +e+l++d+++++R +A+  L
  KHJ34381.1  66 HPADPAERLGGIHALDalidfegvdsAQKVTRFTQCLRTVLKGKDLAPMQPAAIALGKIcrpgGsliselVESEVKTALEWLQSDRVEERRYSAVLVL 163
                 556666676666666654444433322233466999**********************96554244443326678888889************99887 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 2
      HEAT_2  40 lededpavRraaaeaLga 57 
                 l+d+   +R++aaea++a
  KHJ34381.1 189 LRDHRLLIRQTAAEAISA 206
                 577888899999999875 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 7.3
      HEAT_2   7 alendpdpevrraairaLgrig 28 
                 +l+++ d ++rr++++ + +++
  KHJ34381.1 273 RLKDHRDVQIRRTVVMLIPELA 294
                 5667777777877777766555 PP

  == domain 5  score: 6.7 bits;  conditional E-value: 0.0096
      HEAT_2  29 npealpaLvellededpavRraaaea 54 
                 n+ +++  ++++ede+p++R+aaa +
  KHJ34381.1 491 NEFVRDVAIKYVEDENPEIRKAAALT 516
                 55568889999************975 PP

  == domain 6  score: 15.6 bits;  conditional E-value: 1.6e-05
      HEAT_2   2 daLlqalendpdpevrraairaLg.rignp....ealpaLvellededpavRraaaeaLgaigd..pe.alpaLkelld 72 
                 ++Ll + + dpdp +r++++ aL  r++ p    e +++L+ +l+de   vR+ a++ +g++ +  p+ ++p+L++ l 
  KHJ34381.1 543 EKLLTVGVADPDPCIRKTVLAALDeRFDRPlakaENVRTLFFALRDEIFGVREIAIKIIGRLTHvnPAyVIPSLRKVLI 621
                 567777779***************867877665566************************9985334458999999875 PP

  == domain 7  score: 16.3 bits;  conditional E-value: 9.8e-06
      HEAT_2   2 daLlqalendpdpevrraairaLg........rignp..ealpaLvellededp.avRraaaeaLgaig............dpealpaLkellddddd 76 
                 ++Ll  + +d++p v +++i a+g        ++++   e++p+++e+l+d+ +   R+aa ++Lg+++             p  l++L+ +++++++
  KHJ34381.1 663 AVLLPKA-RDSNPSVSATIITAIGdlaavgglEMKPYieELMPIIIEALQDQGSiVKREAALRTLGQLAsnsgyvikpyldYPNLLEILQTIVRTEPH 759
                 5788889.9***************6666665544441559*********99876155666668***99622223333332135566666666666655 PP

  == domain 8  score: 0.5 bits;  conditional E-value: 0.81
      HEAT_2   15 evrraairaLgrignp........ealpaLvellededpavRraaaeaL 55  
                   +r+ ai+++g+i  +        +++  L ++l   d   R aa ++L
  KHJ34381.1 1002 FIRKYAIETIGKISRQvnlndfasKIIHPLSRILGGNDVTLRLAALDTL 1050
                  5789999999988877777778888899999999999999999998876 PP

  == domain 9  score: -1.7 bits;  conditional E-value: 4
      HEAT_2   12 pdpevrraairaLgrignpealpaLvell...ededpavRraaaeaLgaig 59  
                  ++p   +aa +a g+   ++  +++++l     +e+p+    a+ +L+a  
  KHJ34381.1 1124 SNPVHLKAAWDATGKSTKEDWAEWMRKLSvtlLTESPNQALRACASLAANH 1174
                  555555555555555555555555555553212366666666666665544 PP

  == domain 10  score: 2.9 bits;  conditional E-value: 0.15
      HEAT_2    1 ldaLlqalendpdpevrraairaLgrignpealpa 35  
                  +++L++++ n p+  v++ +   Lg+ g    +++
  KHJ34381.1 1807 IPQLIARI-NQPNSRVQQSIHNLLGDVGRAHPQAL 1840
                  45666666.66666666666666664433333333 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1       0.1     1e+02       6      30 ..     144     169 ..     141     170 .. 0.90
   2 ?    2.9   0.0      0.17   1.7e+02       3      25 ..     183     205 ..     181     209 .. 0.86
   3 ?   -2.3   0.0       8.1     8e+03       4      28 ..     270     294 ..     267     296 .. 0.75
   4 !   12.1   0.0   0.00019      0.19       6      27 ..     499     520 ..     494     521 .. 0.89
   5 ?    1.7   0.0      0.41   4.1e+02       8      24 ..     549     565 ..     542     567 .. 0.83
   6 ?    1.5   0.0      0.46   4.6e+02       8      28 ..     585     605 ..     579     607 .. 0.83
   7 ?    3.0   0.0      0.16   1.6e+02       5      29 ..     665     689 ..     662     691 .. 0.86
   8 !   16.5   0.0   7.1e-06     0.007       1      30 [.     702     732 ..     702     733 .. 0.93
   9 ?   -0.0   0.0       1.5   1.5e+03      15      29 ..    1002    1016 ..    1001    1018 .. 0.87
  10 ?   -2.5   0.0       9.1   9.1e+03       1      25 [.    1806    1830 ..    1806    1833 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.1
                 HHHH.T-SSHHHHHHHHHHHHHHHHC CS
        HEAT   6 lkll.sDpspeVReaAakaLgalaev 30 
                 l++l sD   e R++A++ L +la++
  KHJ34381.1 144 LEWLqSDRVEERRYSAVLVLRELARN 169
                 6888899****************975 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.17
                 HHHHHHHT-SSHHHHHHHHHHHH CS
        HEAT   3 PlllkllsDpspeVReaAakaLg 25 
                 + ++  l+D    +R++Aa+a+ 
  KHJ34381.1 183 DQIWVGLRDHRLLIRQTAAEAIS 205
                 5677889**************97 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 8.1
                 HHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLgala 28 
                 l+ +l  + + ++R++++  + +la
  KHJ34381.1 270 LVFRLKDHRDVQIRRTVVMLIPELA 294
                 5566546688889*****9998887 PP

  == domain 4  score: 12.1 bits;  conditional E-value: 0.00019
                 HHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   6 lkllsDpspeVReaAakaLgal 27 
                 +k  +D++pe+R+aAa+++++l
  KHJ34381.1 499 IKYVEDENPEIRKAAALTCCQL 520
                 57789**************998 PP

  == domain 5  score: 1.7 bits;  conditional E-value: 0.41
                 HHT-SSHHHHHHHHHHH CS
        HEAT   8 llsDpspeVReaAakaL 24 
                    Dp+p +R++++ aL
  KHJ34381.1 549 GVADPDPCIRKTVLAAL 565
                 568***********999 PP

  == domain 6  score: 1.5 bits;  conditional E-value: 0.46
                 HHT-SSHHHHHHHHHHHHHHH CS
        HEAT   8 llsDpspeVReaAakaLgala 28 
                 +l+D+   VRe A+k +g+l 
  KHJ34381.1 585 ALRDEIFGVREIAIKIIGRLT 605
                 58899999**********996 PP

  == domain 7  score: 3.0 bits;  conditional E-value: 0.16
                 HHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgalae 29 
                 ll   +D++p+V ++ + a+g+la 
  KHJ34381.1 665 LLPKARDSNPSVSATIITAIGDLAA 689
                 555679*****************96 PP

  == domain 8  score: 16.5 bits;  conditional E-value: 7.1e-06
                 HHHHHHHHHT-.SSHHHHHHHHHHHHHHHHC CS
        HEAT   1 llPlllkllsD.pspeVReaAakaLgalaev 30 
                 l+P+++++l+D  s   ReaA+++Lg+la++
  KHJ34381.1 702 LMPIIIEALQDqGSIVKREAALRTLGQLASN 732
                 8**********888888************86 PP

  == domain 9  score: -0.0 bits;  conditional E-value: 1.5
                  HHHHHHHHHHHHHHH CS
        HEAT   15 eVReaAakaLgalae 29  
                  ++R+ A++++g++++
  KHJ34381.1 1002 FIRKYAIETIGKISR 1016
                  68**********986 PP

  == domain 10  score: -2.5 bits;  conditional E-value: 9.1
                  HHHHHHHHHT-SSHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLg 25  
                  ++P l+  ++ p+++V ++  + Lg
  KHJ34381.1 1806 VIPQLIARINQPNSRVQQSIHNLLG 1830
                  5899************988766666 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1      0.37   3.7e+02       4      53 ..     156     205 ..     153     206 .. 0.85
   2 ?    0.5   0.0      0.93   9.2e+02       4      29 ..     323     348 ..     323     357 .. 0.89
   3 ?   -1.3   0.0       3.4   3.4e+03      38      50 ..     503     515 ..     494     518 .. 0.84
   4 ?   -1.8   0.0       4.9   4.9e+03       3      28 ..     593     618 ..     592     625 .. 0.78
   5 !   12.7   0.1   0.00014      0.14       2      53 ..     634     685 ..     633     687 .. 0.85
   6 !   19.1   0.0   1.4e-06    0.0014       9      55 .]     682     729 ..     678     729 .. 0.95
   7 ?   -2.7   0.0       9.3   9.3e+03      25      42 ..     942     957 ..     930     964 .. 0.68
   8 ?    5.1   0.0     0.033        32       9      55 .]     973    1014 ..     970    1014 .. 0.89
   9 ?   -1.1   0.1       2.9   2.9e+03      45      55 .]    1379    1389 ..    1368    1389 .. 0.78
  10 ?    1.3   0.0      0.52   5.2e+02      28      46 ..    1805    1823 ..    1804    1825 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.37
     HEAT_EZ   4 RraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLg 53 
                 R +A+++L +la ++p l+  +v  + ++   +L+d   ++R++Aa a++
  KHJ34381.1 156 RYSAVLVLRELARNAPTLMYAFVGLVFDQIWVGLRDHRLLIRQTAAEAIS 205
                 66799999669999999999888888888889999999999*******98 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.93
     HEAT_EZ   4 RraAawaLGrlaggepellqplvpei 29 
                 R+ A +a+G++a+  + +++p+++ +
  KHJ34381.1 323 RNDAFLAIGNIANAVKSDIAPYLDGV 348
                 677889***************99876 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 3.4
     HEAT_EZ  38 nddsdeVRaaAag 50 
                 +d+++e+R+aAa 
  KHJ34381.1 503 EDENPEIRKAAAL 515
                 68899**999985 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 4.9
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpe 28 
                 vR+ A+  +Grl  ++p ++ p + +
  KHJ34381.1 593 VREIAIKIIGRLTHVNPAYVIPSLRK 618
                 89999999999888888887765554 PP

  == domain 5  score: 12.7 bits;  conditional E-value: 0.00014
     HEAT_EZ   2 rvRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLg 53 
                 r+++  a  L+ l ++  +l++p+v+ +++ Ll+  +d++++V a+ + a+g
  KHJ34381.1 634 RNKEESAKLLSLLVQNSQDLIKPYVDPMVAVLLPKARDSNPSVSATIITAIG 685
                 667778888855777777889**********************999999998 PP

  == domain 6  score: 19.1 bits;  conditional E-value: 1.4e-06
     HEAT_EZ   9 waLGrlaggepellqplvpeilpaLlalLnddsdeV.RaaAagaLgnl 55 
                  a+G la++++  ++p+++e++p  + +L+d  + V R+aA+++Lg+l
  KHJ34381.1 682 TAIGDLAAVGGLEMKPYIEELMPIIIEALQDQGSIVkREAALRTLGQL 729
                 5999999***************************************97 PP

  == domain 7  score: -2.7 bits;  conditional E-value: 9.3
     HEAT_EZ  25 lvpeilpaLlalLnddsd 42 
                 ++ +ilp++l++L  ++d
  KHJ34381.1 942 YLAKILPFMLSAL--EKD 957
                 4568999999888..444 PP

  == domain 8  score: 5.1 bits;  conditional E-value: 0.033
     HEAT_EZ    9 waLGrlaggepellqplvpeilpaLlalLnddsd.eV..RaaAagaLgnl 55  
                  +++G   + + e++++ vp+i+  +      +++ ++  R++A+ ++g++
  KHJ34381.1  973 LVFG---QSAEEYMHLIVPVIVGVFE-----KPQqPTfiRKYAIETIGKI 1014
                  5788...9999***************.....***65599********987 PP

  == domain 9  score: -1.1 bits;  conditional E-value: 2.9
     HEAT_EZ   45 RaaAagaLgnl 55  
                   +aAa+ Lg++
  KHJ34381.1 1379 ATAAAWGLGQW 1389
                  57888888887 PP

  == domain 10  score: 1.3 bits;  conditional E-value: 0.52
     HEAT_EZ   28 eilpaLlalLnddsdeVRa 46  
                  e++p+L+a+ n ++++V++
  KHJ34381.1 1805 EVIPQLIARINQPNSRVQQ 1823
                  79**************975 PP

>> FATC  FATC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.6   0.2   7.9e-14   7.9e-11       6      32 .]    2406    2432 .]    2402    2432 .] 0.96

  Alignments for each domain:
  == domain 1  score: 41.6 bits;  conditional E-value: 7.9e-14
        FATC    6 qQVdrLIkeATdpeNLaqmyiGWcPww 32  
                   QVdrL  eAT  eNL+q+yiGWc +w
  KHJ34381.1 2406 SQVDRLLIEATKLENLCQHYIGWCSFW 2432
                  5************************** PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       4.5   4.5e+03      22      45 ..     181     204 ..     161     207 .. 0.83
   2 ?   -0.8   0.0       1.4   1.4e+03      29      95 ..     273     303 ..     246     326 .. 0.61
   3 !   16.6   0.0   6.4e-06    0.0063       5      88 ..     475     571 ..     474     590 .. 0.71
   4 !    7.4   0.0     0.004         4      20     116 ..     540     634 ..     531     685 .. 0.76
   5 ?    1.3   0.0      0.33   3.2e+02      13      43 ..     693     723 ..     687     743 .. 0.79
   6 ?    3.5   0.0     0.067        66       2      66 ..    1003    1074 ..    1002    1081 .. 0.90
   7 ?    0.1   0.0      0.74   7.4e+02      59     130 ..    1806    1874 ..    1799    1887 .. 0.69

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 4.5
        Cnd1  22 lvepLrkrLkDedpyVRktaaivv 45 
                 + +++  +L+D    +R+taa ++
  KHJ34381.1 181 VFDQIWVGLRDHRLLIRQTAAEAI 204
                 66788889************9766 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.4
        Cnd1  29 rLkD.edpyVRktaaivvakL..ilndmvkekgflselaklleDenprVvanalaalteiseksenaiyn 95 
                 rLkD +d ++R+t ++++ +L  +                                       s+n++ +
  KHJ34381.1 273 RLKDhRDVQIRRTVVMLIPELanY---------------------------------------SPNEFAK 303
                 445523556666666666666443.......................................3333333 PP

  == domain 3  score: 16.6 bits;  conditional E-value: 6.4e-06
        Cnd1   5 lairtlgcirvpnlv.eylvepLr.krLkDedpyVRktaaivvakL......ilnd.....mvkekgflselakll.eDenprVvanalaalteisek 88 
                 la+ tlg++ ++  v  ++v ++  k ++De+p +Rk aa+++++L      + n+     +  +++++++l++    D++p +++ +laal e  ++
  KHJ34381.1 475 LALNTLGSFEFSGYVlNEFVRDVAiKYVEDENPEIRKAAALTCCQLyvrdpvL-NQtsyhaIRVVSDVIEKLLTVGvADPDPCIRKTVLAALDERFDR 571
                 67888888888764326666666537899*****************6666642.222322133466688888775349**************998777 PP

  == domain 4  score: 7.4 bits;  conditional E-value: 0.004
        Cnd1  20 eylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalnecsewgq 116
                 + + + L+ ++ D+dp +Rkt + ++ + +++ + k ++ + +l  +l+De   V++ a+ ++  + + ++  ++ +l++++ +++++  e+se ++
  KHJ34381.1 540 DVIEKLLTVGVADPDPCIRKTVLAALDERFDRPLAKAEN-VRTLFFALRDEIFGVREIAIKIIGRLTHVNPAYVIPSLRKVLIQMLTE-LEFSEFAR 634
                 5566678999***********99999999***9999988.99999************************9999999998888888854.44444433 PP

  == domain 5  score: 1.3 bits;  conditional E-value: 0.33
        Cnd1  13 irvpnlveylvepLrkrLkDedpyVRktaai 43 
                 + ++  +e+l++ + ++L+D+ + V++ aa+
  KHJ34381.1 693 LEMKPYIEELMPIIIEALQDQGSIVKREAAL 723
                 5677789******************998876 PP

  == domain 6  score: 3.5 bits;  conditional E-value: 0.067
        Cnd1    2 iRalairtlg....cirvpnlveylvepLrkrLkDedpyVRktaaivvakL...ilndmvkekgflselakl 66  
                  iR  ai t+g     ++++++  +++ pL + L  +d + R  a+ +++ L   + +d+    g +s+++++
  KHJ34381.1 1003 IRKYAIETIGkisrQVNLNDFASKIIHPLSRILGGNDVTLRLAALDTLCLLifqLGKDYLHFAGTVSKILNM 1074
                  99********999999****************************9999999778888888888888888877 PP

  == domain 7  score: 0.1 bits;  conditional E-value: 0.74
        Cnd1   59 flselaklleDenprVvanalaalteiseksena.iynllpdiisklsdalnecsewgqitilefLlsyipkd 130 
                  ++ +l   ++ +n+rV+++ +++l ++ +  ++a +y l+ ++ s  +    +      ++i+e++ ++ +k 
  KHJ34381.1 1806 VIPQLIARINQPNSRVQQSIHNLLGDVGRAHPQAlVYPLTVTMKSAPN----TRRSRYAMQIMESMRQHSAKL 1874
                  678899999******************999665515555544444433....445566666666666666655 PP

>> Adaptin_N  Adaptin N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.0       4.1   4.1e+03     131     183 ..     114     170 ..      89     182 .. 0.64
   2 ?    4.2   0.0     0.013        13     309     420 ..     271     392 ..     246     430 .. 0.73
   3 !   21.1   0.1     1e-07    0.0001      94     308 ..     471     742 ..     464     748 .. 0.72
   4 ?   -3.4   0.2       2.5   2.5e+03     359     436 ..     842     925 ..     823     950 .. 0.66
   5 ?    1.4   0.0      0.09        90     250     295 ..    1009    1054 ..    1005    1074 .. 0.86

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 4.1
                 HHHHHHHHHHCCCCCHHCCCCCHHHHHHHCT....T-SSHHHHHHHHHHHHHHHCCC CS
   Adaptin_N 131 rkkAalailklykkdpdllrkqlveeikell....sdkdpgvvlaAvalleeikknd 183
                  + Aa+a+ k+ +   +l+++ + +e+k +l    sd+     ++Av +l e+ +n 
  KHJ34381.1 114 MQPAAIALGKICRPGGSLISELVESEVKTALewlqSDRVEERRYSAVLVLRELARNA 170
                 566777777777776666655445566666666566666788888888888884443 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.013
                 CCSXXTTSXHHHHHHHHHHHCCCXXTTT...HHHHHHHHHHHT.TSSXXHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTT......XXHHHHHHH CS
   Adaptin_N 309 ifllktdddvsirlkaldlllklvdesN...vkeivkeLkkyv.kevadedfksklvkaIgrlaekfatdaewvldvllellsl......sgesvkdei 397
                 +f+lk  +dv+ir++ + l  +l++ s    +k  + +++ ++  +++ e  + ++  aIg++a ++++d++ +ld++l   +       + ++++d +
  KHJ34381.1 271 VFRLKDHRDVQIRRTVVMLIPELANYSPnefAKNFLHKFMVFLsGMLKREKDRNDAFLAIGNIANAVKSDIAPYLDGVLIYVREglsvrsRRSGTVDPV 369
                 578888999999999999999999965323378888888888853344444889999999999999999999999999887775444333334456666 PP

                 HHHHHHHHHHSTTTSTTCHHHHC CS
   Adaptin_N 398 vevirdliqkvpelheeiiekLa 420
                  + i +l q v +   +  e L+
  KHJ34381.1 370 FDCISRLAQAVGQTLSKYMEALL 392
                 66666666655555555555554 PP

  == domain 3  score: 21.1 bits;  conditional E-value: 1e-07
                 HHHHHHHHHHCCC-.-CCCHHHHHHHHH.HHHT-SSHHHHHHHHHHHHHCCCC.......CHHCCCCCHHHHHHHCT....T-SSHHHHHHHHHHHHHH CS
   Adaptin_N  94 lirglALrvLssir.vpelaedlapaik.kllkdrspyvrkkAalailklykk.......dpdllrkqlveeikell....sdkdpgvvlaAvalleei 179
                   + lAL++L+s+  +  ++  +++++  k ++d++p +rk+Aal+  +ly         + +++r  + + i++ll    +d dp +  +++a+l+e 
  KHJ34381.1 471 SEVKLALNTLGSFEfSGYVLNEFVRDVAiKYVEDENPEIRKAAALTCCQLYVRdpvlnqtSYHAIRV-VSDVIEKLLtvgvADPDPCIRKTVLAALDER 568
                 56789*********77788899999995499*********************944444332233333.4677777779999*****9999999999998 PP

                 HCCCCCCC..HHHHHHHCCHHHHH...................HCS-HHHHHHHHHHHCC---SSHHHH.......................HHHHHHH CS
   Adaptin_N 180 kkndrlll..kllpklvrrLcnll...................teldpwlqvkiiklltrlarqepeer.....................skkellesl 236
                    dr l+  + ++ l+  L++ +                     + p l  ++i++lt+l  +e++++                      ++ ++  l
  KHJ34381.1 569 --FDRPLAkaENVRTLFFALRDEIfgvreiaikiigrlthvnpAYVIPSLRKVLIQMLTELEFSEFARNkeesakllsllvqnsqdlikpYVDPMVAVL 665
                 ..4444444788888888888877799999999999998877777777888899999998888888888444445555554444333332226777777 PP

                 CGGCGCSSCHHHHHHHHHCCHCCCCST.....HHHCCHHCHHHHHH.SSCCTCHHHHHCHHHHHHHHXXTTTTTTTCC CS
   Adaptin_N 237 lnllqssnnaVlletvnlivelapkne.....livlavnaLvrlls.skdenlryvaLrtllkivkkepkavqhldlk 308
                 l++ + sn++V    + +i +la          i+ ++ + ++ l+ +     r +aLrtl ++++++   v +++l+
  KHJ34381.1 666 LPKARDSNPSVSATIITAIGDLAAVGGlemkpYIEELMPIIIEALQdQGSIVKREAALRTLGQLASNS-GYVIKPYLD 742
                 77777999999999999888555544444444455666666666664455556789999999999988.666666665 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 2.5
                 HHHHHHHHHHHHS....CCHHHHHHHHHHHHHTTXXHHHHHHHHHHHHHHHHHSTTTSTTCHHHHCCTCCG.XXSHH.HHHHHH CS
   Adaptin_N 359 klvkaIgrlaekf....atdaewvldvllellslsgesvkdeivevirdliqkvpelheeiiekLaellek.iesee.araaai 436
                 ++v+aI ++  +     ++  e+v++ ++ +++++  +  d++ +++  l+  v +  ++ + +++ +l++ +++++ ++++++
  KHJ34381.1 842 AVVEAIMNIFRTLqlecVPFLEKVIPAFITVIRNAPATKLDSYFSQLSVLVGIVRQHIRKYLDEILVVLQEfWNHPNgLKTNIL 925
                 445555555544444457777777777777777777777777777777777777777777777777777776777664444444 PP

  == domain 5  score: 1.4 bits;  conditional E-value: 0.09
                  HHHHHCCHCCCCSTHHHCCHHCHHHHHHSSCCTCHHHHHCHHHHHH CS
   Adaptin_N  250 etvnlivelapknelivlavnaLvrllsskdenlryvaLrtllkiv 295 
                  et+  i +  + n+ +++++  L r l  +d  lr++aL+tl+ + 
  KHJ34381.1 1009 ETIGKISRQVNLNDFASKIIHPLSRILGGNDVTLRLAALDTLCLLI 1054
                  6666677767777799**************************9875 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       1.6   1.6e+03      74     122 ..     160     208 ..     156     228 .. 0.72
   2 !    7.8   0.0    0.0022       2.2     139     195 ..     502     560 ..     489     565 .. 0.83
   3 ?    5.3   0.0     0.013        13      68     127 ..     675     735 ..     628     741 .. 0.82
   4 ?   -0.1   0.0      0.59   5.8e+02      67     131 ..     918     985 ..     873    1021 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.6
     CLASP_N  74 chllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaall 122
                 +++l+ela+   + + ++v  +++ +   l d+  +i+q+a+ a++a +
  KHJ34381.1 160 VLVLRELARNAPTLMYAFVGLVFDQIWVGLRDHRLLIRQTAAEAISASF 208
                 5677788888888888888888888888888888888888888877644 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0022
     CLASP_N 139 lqdKnvqpReysaiwLkilltrfe..shkskleasllldliekslkkgleDanptVRet 195
                 ++d n+++R  +a    +l  r +  +++s++  + + d iek+l+ g++D++p +R+t
  KHJ34381.1 502 VEDENPEIRKAAALTCCQLYVRDPvlNQTSYHAIRVVSDVIEKLLTVGVADPDPCIRKT 560
                 67888888888888888888888777777888888888*******************97 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.013
     CLASP_N  68 tlsstgchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnan.qalaallsnasf 127
                 ++s+t +  + +la + + +++p++e l+p++++ l+d+  i+  +a+  +l +l sn ++
  KHJ34381.1 675 SVSATIITAIGDLAAVGGLEMKPYIEELMPIIIEALQDQGSIVKREAAlRTLGQLASNSGY 735
                 678899999999******************************9766541577777777765 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.59
     CLASP_N  67 ttlsstgchllkelaiqlkeqldpmveillptLlkllgd...tKkiisqnanqalaallsnasfspri 131
                   l ++ ++l++ +++ l+ +++ ++ ++lp +l  l +   t  i+s++  +a+  + ++a+   ++
  KHJ34381.1 918 NGLKTNILLLIEAISRSLEGEFKIYLAKILPFMLSALEKdvtTRRITSEKVMHAFLVFGQSAEEYMHL 985
                 5678899999***********************99886423278888888888887777777644444 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.61   6.1e+02      11      28 ..    1282    1297 ..    1275    1303 .. 0.77
   2 ?    5.5   0.1      0.02        20       9      24 ..    1310    1325 ..    1304    1333 .. 0.85
   3 ?    5.8   0.0     0.016        16       2      19 ..    1666    1683 ..    1666    1685 .. 0.88

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.61
       TPR_7   11 rlGdyeeAielyeqsLal 28  
                  +l++y+ Ai+++++  a 
  KHJ34381.1 1282 QLQQYDAAIGILRR--AQ 1297
                  499**********9..65 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.02
       TPR_7    9 ysrlGdyeeAielyeq 24  
                  +++l ++eeA+e+y++
  KHJ34381.1 1310 FEKLERWEEALEFYRE 1325
                  667***********97 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.016
       TPR_7    2 LlnLarlysrlGdyeeAi 19  
                  ++ Lar+y ++G+++ A+
  KHJ34381.1 1666 YVLLARCYLKQGEWQVAL 1683
                  678***********9886 PP

>> VirDNA-topo-I_N  Viral DNA topoisomerase I, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00089      0.89      10      46 ..    1434    1471 ..    1428    1477 .. 0.89
   2 ?   -2.9   0.1       7.8   7.8e+03      36      49 ..    1616    1629 ..    1615    1631 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00089
                       SSTTS-SB--TT.-THHHHHHH----TT-EEEEEE--- CS
  VirDNA-topo-I_N   10 vDkeltnrVsdd.NptYeilkkvkiPkhLtdvvvyeqt 46  
                        D+el   Vs++ N +Y ++ +v++ + L++++vy q 
       KHJ34381.1 1434 LDTELSAGVSESyNRAYTVVVRVQMLAELEEIIVYKQC 1471
                       5999999999877**********************995 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 7.8
                       T-EEEEEE---HHH CS
  VirDNA-topo-I_N   36 hLtdvvvyeqtlee 49  
                       hL  v + +qt+e+
       KHJ34381.1 1616 HLRAVQIQAQTVES 1629
                       9**********996 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.1     0.063        62       6      29 ..    1275    1297 ..    1271    1310 .. 0.84
   2 ?    5.3   0.1     0.043        42      11      35 ..    1310    1334 ..    1305    1337 .. 0.89
   3 ?    5.6   0.1     0.035        35       3      38 ..    1585    1620 ..    1583    1626 .. 0.85

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.063
      TPR_14    6 alaeallalGdpdeAiallrrala 29  
                  al ++  +l+++d+Ai +lrra +
  KHJ34381.1 1275 ALIHINNQLQQYDAAIGILRRA-Q 1297
                  67788899*************9.4 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.043
      TPR_14   11 llalGdpdeAiallrralalaPdda 35  
                  ++ l++++eA++ +r++ + +Pd+ 
  KHJ34381.1 1310 FEKLERWEEALEFYREREEEFPDQS 1334
                  57799*****************986 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.035
      TPR_14    3 allalaeallalGdpdeAiallrralalaPddaeaw 38  
                  +++a +++++a+G+ ++A+++l+   ++  d+++a 
  KHJ34381.1 1585 VQYAVLKFHWANGKQEAALNALQSFTKDLTDHLRAV 1620
                  5788999****************9999888888776 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.7     0.055        54      33      79 ..    1280    1323 ..    1249    1325 .. 0.70
   2 ?   -1.8   0.0       3.9   3.9e+03      24      50 ..    1405    1431 ..    1398    1440 .. 0.76
   3 ?    7.9   0.2    0.0036       3.6      24      43 ..    1664    1683 ..    1654    1689 .. 0.64

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.055
                  HHHTT-HHHHHHHHHCTSHHHC-HHHHHHHHHHHH.HTT-HHHHHHHH CS
      ANAPC3   33 lylngqykrAyellrkaklnskslgcrylfAqcll.kLkkyeeAiaaL 79  
                    +++qy+ A+ +lr+a    +  +  +++ ++ + kL+++eeA+  +
  KHJ34381.1 1280 NNQLQQYDAAIGILRRA----QLYKDGITLRETWFeKLERWEEALEFY 1323
                  446789***********....55566667777777799*****99765 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 3.9
                  HHHHHHHHHHHHTT-HHHHHHHHHCTS CS
      ANAPC3   24 edayllAlclylngqykrAyellrkak 50  
                  + +++ A   ++++q+ +A ++++ka+
  KHJ34381.1 1405 DRSFFGAILALHRNQFREATKFIQKAR 1431
                  5566667778999***********993 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.0036
                  HHHHHHHHHHHHTT-HHHHH CS
      ANAPC3   24 edayllAlclylngqykrAy 43  
                  e   llA c++++g+++ A+
  KHJ34381.1 1664 EYYVLLARCYLKQGEWQVAL 1683
                  34445566666666666554 PP

>> Sec7_N  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       2.6   2.6e+03     117     147 ..     148     178 ..     132     179 .. 0.81
   2 ?    5.2   0.0     0.018        18      66     149 ..     662     743 ..     635     745 .. 0.78
   3 ?    0.8   0.4       0.4     4e+02      73     133 ..     835     896 ..     814     916 .. 0.63
   4 ?    0.4   2.3      0.54   5.3e+02      51     127 ..     885     964 ..     835     982 .. 0.69
   5 ?   -2.1   0.0       3.1   3.1e+03      42      81 ..    1411    1450 ..    1409    1462 .. 0.74
   6 ?   -2.8   0.0       5.2   5.2e+03      65     109 ..    2248    2292 ..    2236    2297 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.6
      Sec7_N 117 esdsslwqrvlaLeilrrlcsdpqllvelyl 147
                 +sd   + r+ a+ +lr+l +++ +l++ ++
  KHJ34381.1 148 QSDRVEERRYSAVLVLRELARNAPTLMYAFV 178
                 5566679999****************99886 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.018
      Sec7_N  66 cplLlknlsespsfpvferslrivllLlkkfrseLktEievflsllilillesdsslwqrvlaLeilrrlcsdpqllvelylnY 149
                 + +Ll  +   ++++v+  ++  +  L      e+k  ie ++  +i  l + + s+ +r+ aL++l +l s++  +++ yl Y
  KHJ34381.1 662 VAVLLPKA-RDSNPSVSATIITAIGDLAAVGGLEMKPYIEELMPIIIEAL-QDQGSIVKREAALRTLGQLASNSGYVIKPYLDY 743
                 33444444.66778888888888888888888888889999999999999.88999*************************998 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.4
      Sec7_N  73 lsespsfpvferslrivllLlkkfrseLktEievflsllililles.dsslwqrvlaLeilr 133
                    +++  v+e +++i+ +L  +    L++ i +f++++    +++ ds + q  +++ i+r
  KHJ34381.1 835 SLLQHHAAVVEAIMNIFRTLQLECVPFLEKVIPAFITVIRNAPATKlDSYFSQLSVLVGIVR 896
                 22566666777777777777777777777777777777766665554555555555555554 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.54
      Sec7_N  51 frkhpellqllkqklcplLlknlsespsfpvf.erslrivllLlkkfrseLktEievflsllililles.dssl.wqrvl 127
                 f++ + l+ +++q++ + L  +l   ++f      +   +llL++  + +L+ E +++l  ++ ++l+  ++ +   r++
  KHJ34381.1 885 FSQLSVLVGIVRQHIRKYLDEILVVLQEFWNHpNGLKTNILLLIEAISRSLEGEFKIYLAKILPFMLSAlEKDVtTRRIT 964
                 44666666666666666666666655555444133334467788889999999999999999988887774444144444 PP

  == domain 5  score: -2.1 bits;  conditional E-value: 3.1
      Sec7_N   42 svlsnhgdvfrkhpellqllkqklcplLlknlsespsfpv 81  
                  ++l  h++ fr+ ++++q  ++ l   L+  +ses +   
  KHJ34381.1 1411 AILALHRNQFREATKFIQKAREGLDTELSAGVSESYNRAY 1450
                  589999999********99999998888888855444333 PP

  == domain 6  score: -2.8 bits;  conditional E-value: 5.2
      Sec7_N   65 lcplLlknlsespsfpvferslrivllLlkkfrseLktEievfls 109 
                  l ++L+  ++ s+    f ++++ v+ +l++ +++L   +e+f++
  KHJ34381.1 2248 LTRMLTYAMEVSNIEGSFRITCENVMRVLRENKESLMAVLEAFIH 2292
                  556666666677777788999999999999999999999998875 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.2      0.32   3.1e+02       5      22 ..    1284    1300 ..    1280    1341 .. 0.65
   2 ?    7.5   0.2    0.0057       5.7      23      44 ..    1661    1682 ..    1659    1684 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.32
      TPR_19    5 gdyaeAlalleqalqedp 22  
                  ++y++A+ +l++a q + 
  KHJ34381.1 1284 QQYDAAIGILRRA-QLYK 1300
                  6778888888776.4433 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0057
      TPR_19   23 knaearllLAeallalgqldeA 44  
                  ++ae   lLA+++l++g+++ A
  KHJ34381.1 1661 QYAEYYVLLARCYLKQGEWQVA 1682
                  67788889**********9866 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.4      0.09        89      12      26 ..    1311    1325 ..    1309    1327 .. 0.91
   2 ?    0.5   0.1      0.88   8.7e+02       9      28 ..    1412    1431 ..    1411    1432 .. 0.87
   3 ?   10.1   0.6   0.00076      0.75       1      22 [.    1663    1684 ..    1663    1686 .. 0.94

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.09
       TPR_2   12 yklgdyeeAleafek 26  
                  +kl ++eeAle++++
  KHJ34381.1 1311 EKLERWEEALEFYRE 1325
                  6899*********96 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.88
       TPR_2    9 layyklgdyeeAleafekAl 28  
                   ++++++++ eA ++ +kA 
  KHJ34381.1 1412 ILALHRNQFREATKFIQKAR 1431
                  578899************96 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.00076
       TPR_2    1 aealynlGlayyklgdyeeAle 22  
                  ae++  l+++y+k+g+++ Al+
  KHJ34381.1 1663 AEYYVLLARCYLKQGEWQVALK 1684
                  799*****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2432 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        21  (0.00117129); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 1.28u 0.29s 00:00:01.57 Elapsed: 00:00:00.49
# Mc/sec: 14840.20
//
Query:       KHJ34382.1  [L=287]
Description: putative protein of replication termination factor 2 superfamily [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.7e-56  189.0   3.0    1.2e-55  188.7   3.0    1.1  1  Rtf2          Rtf2 RING-finger
      1e-05   25.2   0.2       0.03   14.2   0.0    2.7  2  zf-Nse        Zinc-finger of the MIZ type in Nse subunit
    0.00086   19.3   0.5      0.021   14.8   0.2    2.6  2  zf-RING_UBOX  RING-type zinc-finger
  ------ inclusion threshold ------
      0.013   15.7   0.0      0.033   14.3   0.0    1.8  1  zf-NOSIP      Zinc-finger of nitric oxide synthase-interactin
      0.017   15.1   1.3      0.022   14.7   0.3    1.8  2  zf-RING_5     zinc-RING finger domain
       0.42   10.4   0.1       0.42   10.4   0.1    1.9  2  zf-RING_11    RING-like zinc finger


Domain annotation for each model (and alignments):
>> Rtf2  Rtf2 RING-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.7   3.0   4.2e-59   1.2e-55       1     259 [.       1     263 [.       1     266 [. 0.82

  Alignments for each domain:
  == domain 1  score: 188.7 bits;  conditional E-value: 4.2e-59
        Rtf2   1 mGnDGGsipkRdelvkekkkkekv.....dkeeekearwklCaLsqepLkkPivadrlGkLYnkdavleaLldkskekslskaas.hikglkdvvelkl 93 
                 mGnDGGsip+R elvke+++k ++        e + + wk+C Ls++pL  Piv+d  G+LYnkda+le L+  + e++ ++  + +i++lkdvve+++
  KHJ34382.1   1 MGNDGGSIPRRIELVKEAARKPNTselkaTLLEAQTHAWKICPLSNQPLTAPIVSDYTGALYNKDAILEKLIPNERENDGTDILQgRITSLKDVVEVHF 99 
                 9****************666666644333345667899************************************999888888777************* PP

        Rtf2  94 tknpafeeskkdatkdtkeapfiCpltglemngktkfvalrkCGcVfsekalkevksevClvCgkeykeedviplnptke.elellkarleeekak... 188
                 t  ++            +e++ +C lt++e+ ++tk+v+l++CG+ fse+a++ev  + C +C++ey++e++i + p+   e ++l+ r+ + +++   
  KHJ34382.1 100 TLIKEG-----------EEERRVCSLTSKELGPHTKAVYLVPCGHTFSETAIREVRGDRCIQCNEEYTSENIINILPSTTdEINKLSMRMSKLRQAglt 187
                 *99744...........455669******************************************************877699*******999999888 PP

        Rtf2 189 ...kkkkkkakkkkkakakgskaeaeaaskssseas...esskagkkkekkkekkkrslaekneksevykslftssk 259
                    kk   ++k+kkk +a++++++++++s+  s++    + ++a+ + +  +e+++r++ +k  ++e +kslfts++
  KHJ34382.1 188 hslKKMPGSKKRKKKINAATNTNKTTENSSV-SISYgikNVNTASITSKVLEEQEERNKRRKIIMNENLKSLFTSKS 263
                 7766666665555555544444444443333.33324445556666677778888888899999999999****987 PP

>> zf-Nse  Zinc-finger of the MIZ type in Nse subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   9.9e-06      0.03      13      43 ..      41      71 ..      32      89 .. 0.85
   2 !    8.1   0.3   0.00076       2.3      13      51 ..     111     151 ..     101     153 .. 0.69

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 9.9e-06
                B-TTTSSB-SSEEEESSS--EEEHHHHHHHC CS
      zf-Nse 13 kCPltlqpfeePvtskkCpHvFEreaIleli 43
                 CPl+ qp++ P+ s      ++++aIle +
  KHJ34382.1 41 ICPLSNQPLTAPIVSDYTGALYNKDAILEKL 71
                4**************************9866 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00076
                 B-TTTSSB-SSEEEES....SS--EEEHHHHHHHCTTTS-EE- CS
      zf-Nse  13 kCPltlqpfeePvtsk....kCpHvFEreaIlelikrkktvkC 51 
                  C lt +++  P t+      C H+F ++aI e+ +  ++++C
  KHJ34382.1 111 VCSLTSKELG-PHTKAvylvPCGHTFSETAIREV-RGDRCIQC 151
                 5677766653.4444445558**********986.47777777 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.082   2.5e+02       1      12 [.      42      53 ..      42      67 .. 0.91
   2 !   14.8   0.2   7.1e-06     0.021      13      38 ..     126     151 ..     112     160 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.082
  zf-RING_UBOX  1 CpIClelftdPl 12
                  Cp +++++t P+
    KHJ34382.1 42 CPLSNQPLTAPI 53
                  **********94 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 7.1e-06
  zf-RING_UBOX  13 v.l.pCGHtFCreClwelskslegafkC 38 
                   v l pCGHtF +  +     ++++ ++C
    KHJ34382.1 126 VyLvPCGHTFSETAI--REVRGDRCIQC 151
                   33449**********..44555555555 PP

>> zf-NOSIP  Zinc-finger of nitric oxide synthase-interacting protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.1e-05     0.033      38      71 ..      37      71 ..      16      75 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.1e-05
    zf-NOSIP 38 kdfdccslslqacrdpvlte.dgylyekeaileyi 71
                + ++ c ls q+   p++++  g ly+k+aile +
  KHJ34382.1 37 HAWKICPLSNQPLTAPIVSDyTGALYNKDAILEKL 71
                56789*************97479*********976 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.3   7.4e-06     0.022       2      43 ..     112     152 ..     110     153 .. 0.83
   2 ?   -3.2   0.0         3   8.9e+03       4      16 ..     263     275 ..     262     276 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 7.4e-06
   zf-RING_5   2 CnkCfekl.skeekfyltsCgHifCekClkkllekeavCpiCr 43 
                 C+  +++l   ++++yl++CgH+f e+ +++     ++C +C+
  KHJ34382.1 112 CSLTSKELgPHTKAVYLVPCGHTFSETAIREVR--GDRCIQCN 152
                 44445556677889*****************99..9******7 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 3
   zf-RING_5   4 kCfeklskeekfy 16 
                 +C+ +++++++f+
  KHJ34382.1 263 SCSAQTKNNDDFM 275
                 6888887777775 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   0.00014      0.42      12      24 ..     123     135 ..     112     136 .. 0.83
   2 ?   -3.0   0.2       2.1   6.3e+03       5      19 ..     151     165 ..     148     165 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00014
  zf-RING_11  12 gqalfilpCsHtF 24 
                  +a+++ pC+HtF
  KHJ34382.1 123 TKAVYLVPCGHTF 135
                 5699********9 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.1
  zf-RING_11   5 CLeefkpgqalfilp 19 
                 C ee++ ++ + ilp
  KHJ34382.1 151 CNEEYTSENIINILP 165
                 888888777666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (287 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1424  (0.0794244); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.18s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 2316.18
//
Query:       KHJ34383.1  [L=743]
Description: hypothetical protein EV44_g5145 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (743 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.37
# Mc/sec: 6034.73
//
Query:       KHJ34384.1  [L=994]
Description: hypothetical protein EV44_g1831 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (994 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1917  (0.106922); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.83u 0.26s 00:00:01.08 Elapsed: 00:00:00.44
# Mc/sec: 6729.64
//
Query:       KHJ34385.1  [L=522]
Description: putative gata transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-23   81.6  14.2      2e-13   49.7   4.6    2.6  2  GATA             GATA zinc finger
    9.9e-05   21.8   1.0       0.11   12.1   0.5    2.7  2  TF_Zn_Ribbon     TFIIB zinc-binding
     0.0054   16.9   3.0       0.38   10.9   0.7    2.7  2  Auto_anti-p27    Sjogren's syndrome/scleroderma autoantigen 1
     0.0061   16.7   0.2       0.15   12.2   0.1    2.8  2  Zn-ribbon_8      Zinc ribbon domain
  ------ inclusion threshold ------
        0.1   12.6   2.4       0.57   10.2   0.2    2.5  2  HypA             Hydrogenase/urease nickel incorporation, met
       0.56   11.1   5.6        2.7    8.9   1.3    2.9  2  Tnp_zf-ribbon_2  DDE_Tnp_1-like zinc-ribbon
       0.66    9.9   6.3       0.33   10.9   2.3    2.4  2  Nudix_N_2        Nudix N-terminal
        3.8    7.6   9.0    6.2e+02    0.5   9.0    3.0  1  DZR              Double zinc ribbon


Domain annotation for each model (and alignments):
>> GATA  GATA zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.8   2.0   9.3e-13   2.1e-09       7      34 ..      84     110 ..      83     112 .. 0.90
   2 !   49.7   4.6   8.9e-17     2e-13       1      35 [.     237     270 ..     237     271 .. 0.97

  Alignments for each domain:
  == domain 1  score: 36.8 bits;  conditional E-value: 9.3e-13
        GATA   7 tkTplWRrgpdgnksLCnaCGlyykkkg 34 
                 + TplWRr  +g++ LCnaCGly+k ++
  KHJ34385.1  84 SRTPLWRRSSQGAT-LCNACGLYFKARN 110
                 57************.*********9775 PP

  == domain 2  score: 49.7 bits;  conditional E-value: 8.9e-17
        GATA   1 CsnCgttkTplWRrgpdgnksLCnaCGlyykkkgl 35 
                 C+nCgtt TplWRr++ g +  CnaCGly +++g+
  KHJ34385.1 237 CQNCGTTITPLWRRDKTGRT-ICNACGLYKRLHGV 270
                 ********************.************97 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0013         3       5      27 ..      82     104 ..      81     110 .. 0.91
   2 !   12.1   0.5   4.8e-05      0.11       3      27 ..     237     263 ..     235     264 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0013
                   TTTCEECHEETSTTCEEESSSSB CS
  TF_Zn_Ribbon   5 nCgstnlveDpergelvCtdCGl 27 
                   +C+ t l +  ++g ++C +CGl
    KHJ34385.1  82 ICSRTPLWRRSSQGATLCNACGL 104
                   69999999**************8 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 4.8e-05
                   ETTTTCEEC..HEETSTTCEEESSSSB CS
  TF_Zn_Ribbon   3 CPnCgstnl..veDpergelvCtdCGl 27 
                   C nCg+t +   +  ++g ++C +CGl
    KHJ34385.1 237 CQNCGTTITplWRRDKTGRTICNACGL 263
                   9****9532447779***********7 PP

>> Auto_anti-p27  Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.1    0.0092        21      20      40 .]      82     103 ..      78     103 .. 0.84
   2 !   10.9   0.7   0.00017      0.38      17      40 .]     236     262 ..     232     262 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0092
  Auto_anti-p27  20 vC.gvPLmrdrkggkvyCvaCd 40 
                     C  +PL r   +g ++C aC+
     KHJ34385.1  82 ICsRTPLWRRSSQGATLCNACG 103
                    4889*****7678999*****6 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00017
  Auto_anti-p27  17 tCpvC...gvPLmrdrkggkvyCvaCd 40 
                     C++C    +PL r  k+g+++C aC+
     KHJ34385.1 236 ACQNCgttITPLWRRDKTGRTICNACG 262
                    5****88889****6699********6 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0       0.2   4.5e+02       8      16 ..      99     107 ..      86     116 .. 0.69
   2 !   12.2   0.1   6.9e-05      0.15       8      33 ..     237     262 ..     219     267 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.2
  Zn-ribbon_8   8 CeeCghefe 16 
                  C++Cg  f 
   KHJ34385.1  99 CNACGLYFK 107
                  666665554 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 6.9e-05
  Zn-ribbon_8   8 CeeCghefevlqsisdapltaCPeCg 33 
                  C++Cg++ ++l + ++   t C +Cg
   KHJ34385.1 237 CQNCGTTITPLWRRDKTGRTICNACG 262
                  *********999877666777****9 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1      0.12   2.6e+02      53      84 ..      79     110 ..      71     201 .. 0.79
   2 ?   10.2   0.2   0.00025      0.57      57      94 ..     221     263 ..     208     269 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.12
                 CC.TTTT-EEEEEEE--EEEETTTS-EEECHH CS
        HypA  53 egtvlegaeLeieevpvkvrCreCgkefelee 84 
                 + ++++++ L  ++ +  + C+ Cg  f+ ++
  KHJ34385.1  79 NAQICSRTPLWRRSSQGATLCNACGLYFKARN 110
                 55667777777888899999999998888654 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00025
                 TTT-EEEEEEE--EEEETTTS-EEE.CHH..H..HHS-TTTSS CS
        HypA  57 legaeLeieevpvkvrCreCgkefe.lee..k..alrCpkCgs 94 
                 +e+ +++++++ v++ C++Cg++++ l +  k  ++ C++Cg 
  KHJ34385.1 221 VESLRVHLQDTTVVAACQNCGTTITpLWRrdKtgRTICNACGL 263
                 56677889999************99644333245559****96 PP

>> Tnp_zf-ribbon_2  DDE_Tnp_1-like zinc-ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.2       0.1   2.3e+02       5      25 ..      82     105 ..      81     106 .. 0.68
   2 ?    8.9   1.3    0.0012       2.7       3      25 ..     237     264 ..     236     271 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.1
  Tnp_zf-ribbon_2   5 vClk...kkikkeTriiCqeCdvp 25 
                      +C++    +++ +  + C++C+ +
       KHJ34385.1  82 ICSRtplWRRSSQGATLCNACGLY 105
                      66666663444447889****976 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0012
  Tnp_zf-ribbon_2   3 CkvClk......kkikkeTriiCqeCdvp 25 
                      C++C        +++k+  r+iC++C+ +
       KHJ34385.1 237 CQNCGTtitplwRRDKT-GRTICNACGLY 264
                      99999999999888888.********865 PP

>> Nudix_N_2  Nudix N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1       0.8   1.8e+03      25      29 ..      99     103 ..      98     106 .. 0.67
   2 ?   10.9   2.3   0.00015      0.33       3      29 ..     237     262 ..     237     263 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.8
                 ETTTT CS
   Nudix_N_2  25 CpaCg 29 
                 C+aCg
  KHJ34385.1  99 CNACG 103
                 66665 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00015
                 -TTT--B-EEE--TT-SS-EEEETTTT CS
   Nudix_N_2   3 CsqCGtpvelripdgDnreRlvCpaCg 29 
                 C++CGt+++      D+  R +C+aCg
  KHJ34385.1 237 CQNCGTTITPLW-RRDKTGRTICNACG 262
                 *******99777.57***********9 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   9.0      0.27   6.2e+02      28      49 .]     234     262 ..      82     262 .. 0.76

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.27
         DZR  28 edrCpsCgekvdpearf.......CpeCG 49 
                   +C +Cg+ ++p +r        C++CG
  KHJ34385.1 234 VAACQNCGTTITPLWRRdktgrtiCNACG 262
                 55666666666666655555555566665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (522 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1126  (0.0628033); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.58u 0.23s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 3922.40
//
Query:       KHJ34386.1  [L=267]
Description: hypothetical protein EV44_g2143 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (267 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2138.35
//
Query:       KHJ34387.1  [L=461]
Description: putative kinetochore protein nuf2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.8e-41  140.5   0.6    1.1e-40  139.0   0.1    2.1  2  Nuf2           Nuf2 family
    1.1e-29  102.8  13.0    1.1e-29  102.8  13.0    4.1  4  DHR10          Designed helical repeat protein 10 domain
  ------ inclusion threshold ------
      0.051   12.4  45.0       0.12   11.2  20.3    3.1  3  Spc7           Spc7 kinetochore protein
      0.079   13.0   0.4       0.48   10.4   0.0    2.4  2  GhoS           Endoribonuclease GhoS
       0.28   11.7   3.4        7.7    7.1   0.2    3.3  2  YtxH           YtxH-like protein
        2.5    8.1   7.7       0.74    9.8   0.7    3.6  4  ApoC-I         Apolipoprotein C-I (ApoC-1)


Domain annotation for each model (and alignments):
>> Nuf2  Nuf2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.0   0.1   3.6e-44   1.1e-40       2     139 .]      27     167 ..      26     167 .. 0.97
   2 ?   -3.0   0.0       2.3     7e+03      36      58 ..     313     335 ..     301     363 .. 0.63

  Alignments for each domain:
  == domain 1  score: 139.0 bits;  conditional E-value: 3.6e-44
        Nuf2   2 dsfplldvreIvaclqelgfevteedlakPtpefvqklyeqfleilmgiseedieqaaraale..eleepel.yedslpllillrslkrflkacgvedF 97 
                 d+f++l+++eIv c++++g+++t +dl+ P+p ++q+++e+f+eil++ ++e++e+a+r+a e    e+ ++   ++ +l+ ++ sl+++l +cg+ dF
  KHJ34387.1  27 DAFMRLPDKEIVGCISDIGVPFTVADLQMPNPLQIQMIFEWFAEILLNATRETVEPAMREAVEdvCGEYIDIiPPETRNLMGFYVSLRKLLIECGITDF 125
                 79***********************************************************99886788888899************************ PP

        Nuf2  98 slsDllkPdpkRtrriLSaliNFirFreerseifeelleeae 139
                 s++Dl+kP+++R+++++S++iNF+rFre+++++++e++++ae
  KHJ34387.1 126 SFQDLYKPTHDRLVKVFSYIINFVRFRESQTAVIDEHFNKAE 167
                 **************************************9976 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.3
        Nuf2  36 vqklyeqfleilmgiseedieqa 58 
                 v++  +q+ +i+++is+ed e++
  KHJ34387.1 313 VSSCIKQLEDIIIEISKEDEENK 335
                 45555666677777777764333 PP

>> DHR10  Designed helical repeat protein 10 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9  18.5       2.3   6.9e+03      30     106 ..     168     248 ..     154     251 .. 0.75
   2 ?    0.1   9.2      0.27   8.1e+02      73     107 ..     215     249 ..     202     264 .. 0.60
   3 !  102.8  13.0   3.7e-33   1.1e-29       1     117 []     279     395 ..     279     395 .. 0.98
   4 ?    2.6   1.8     0.044   1.3e+02      71      96 ..     409     434 ..     397     450 .. 0.54

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.3
       DHR10  30 vvekdlrsciklleeieaelakleeakkklkelrdaleekeielr....elerkeerlqrqlenaeeklerlreqaeekre 106
                 v +  ++++i+  +e e +l +l+  ++ ++++ ++  +++++ +    +l + +er+ r+ ena++k + l++  eek  
  KHJ34387.1 168 VTKSRIENLIAENQEMELQLDELKHNRRSVEAHLAEKVKRNENIKrrllDLRQGQERVSRRFENAKQKKNELTKALEEKTT 248
                 556677888888888888888888888888877766666655443233378888899999999999999999999999876 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.27
       DHR10  73 lrelerkeerlqrqlenaeeklerlreqaeekrea 107
                 l +l + +er+ r+ ena++k + l++  eek  +
  KHJ34387.1 215 LLDLRQGQERVSRRFENAKQKKNELTKALEEKTTE 249
                 44555555666666666666666666666665443 PP

  == domain 3  score: 102.8 bits;  conditional E-value: 3.7e-33
       DHR10   1 seslaeekeelaelErkarelqakidalqvvekdlrsciklleeieaelakleeakkklkelrdaleekeielrelerkeerlqrqlenaeeklerlre 99 
                 s++l++ k e + l+r+ar lq+++d+++ v  d++scik+le+i  e+ k++e++k+l+++r++l ++++ l+++er++ +lqrql++++e++++lr 
  KHJ34387.1 279 SNTLTSVKVENDVLDRRARSLQTSTDTFSIVSSDVSSCIKQLEDIIIEISKEDEENKRLTKQRETLGDRRNSLKDIERTQNLLQRQLSKWTERTQKLRD 377
                 68999999******************************************************************************************* PP

       DHR10 100 qaeekreaakarleelre 117
                  +eek  +ak r+eel++
  KHJ34387.1 378 GSEEKLLNAKIRMEELKQ 395
                 ****************97 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.044
       DHR10  71 ielrelerkeerlqrqlenaeekler 96 
                 +e ++   ++e+ +++ +  +e +e 
  KHJ34387.1 409 REIEKKRIHIEQTEKKMSDLKESIEN 434
                 44444444444444444444444444 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6  14.6     0.033     1e+02     171     254 ..     161     247 ..     150     251 .. 0.72
   2 ?   10.8   9.1   5.5e-05      0.16     156     266 ..     230     340 ..     217     342 .. 0.93
   3 ?   11.2  20.3   4.2e-05      0.12     149     253 ..     328     435 ..     320     460 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.033
        Spc7 171 eleeekaeleeeleklqeaaeelesidkeeLeelreelael....kaeieekkkelaelqeqleeleekieelkeqkseleeeiaeae 254
                 e  ++ +  ++++e+l ++++e+e ++ +eL+  r++++++     +  e+ k++l +l++  e+++ ++e++k++k+el ++++e+ 
  KHJ34387.1 161 EHFNKAEVTKSRIENLIAENQEME-LQLDELKHNRRSVEAHlaekVKRNENIKRRLLDLRQGQERVSRRFENAKQKKNELTKALEEKT 247
                 444556667777888888777744.57777777776665541000556788899999999999*****************99999865 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 5.5e-05
        Spc7 156 elLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeae 254
                 e+ +++++el+++l+e ++e   l++e  +l+  + +  +  + +L el ++l+++k+e + + ++  +lq+  ++ +   +++++ +++le+ i e  
  KHJ34387.1 230 ENAKQKKNELTKALEEKTTEIILLRQESSRLKPYVLQSPAALQGSLTELSNTLTSVKVENDVLDRRARSLQTSTDTFSIVSSDVSSCIKQLEDIIIEIS 328
                 556789999**************************9999999********************************************************9 PP

        Spc7 255 rvleeckgwses 266
                 +  ee+k+ +++
  KHJ34387.1 329 KEDEENKRLTKQ 340
                 999999998876 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 4.2e-05
        Spc7 149 egleedkelLekqeeel...dellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqks 244
                 ++ +e++++L+kq+e l    + l+++e+ ++ l+++l k  e+ ++l +  +e+L +++ +++elk+  +++ +e ae+ +++e+++  ie++++++s
  KHJ34387.1 328 SKEDEENKRLTKQRETLgdrRNSLKDIERTQNLLQRQLSKWTERTQKLRDGSEEKLLNAKIRMEELKQVHRNLTDERAEKGREIEKKRIHIEQTEKKMS 426
                 555688999*******94444456666777889****************************************************************** PP

        Spc7 245 eleeeiaea 253
                 +l+e i+++
  KHJ34387.1 427 DLKESIENE 435
                 ******975 PP

>> GhoS  Endoribonuclease GhoS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.68     2e+03       6      25 ..     141     161 ..     139     179 .. 0.80
   2 ?   10.4   0.0   0.00016      0.48      21      69 ..     273     321 ..     256     333 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.68
                 .--EEEEE.E--GGGHHHHHH CS
        GhoS   6 vtrYvvtv.kyhekslseine 25 
                 v  Y++++ +++e++ ++i e
  KHJ34387.1 141 VFSYIINFvRFRESQTAVIDE 161
                 678999864789999888876 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00016
                 HHHHHHHHHHHHTTEESEEE-SSS-EEE-TTSEEEE---S-HHHHHHHH CS
        GhoS  21 seinelnsvltragFsltlaDeeGkpheLgtntfglisalseeeieela 69 
                   + el+++lt    +  + D    + + +t+tf+++s+   + i++l 
  KHJ34387.1 273 GSLTELSNTLTSVKVENDVLDRRARSLQTSTDTFSIVSSDVSSCIKQLE 321
                 56889***********************************999999986 PP

>> YtxH  YtxH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.3     0.031        92      27      69 ..     222     249 ..     181     323 .. 0.77
   2 ?    7.1   0.2    0.0026       7.7      25      71 ..     356     440 ..     355     444 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.031
        YtxH  27 Rkdlkekaddlkekakelleeakekakekaedlkekvkekade 69 
                 +++++++++++k+k +el++ ++ek+                e
  KHJ34387.1 222 QERVSRRFENAKQKKNELTKALEEKT---------------TE 249
                 35555566666666666666665555...............32 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0026
        YtxH  25 etRkdlkekaddlkekakelleeakeka......................................kekaedlkekvkekadelk 71 
                  t++ l++++++  e++++l +  +ek                                       ++k +dlke++++++  + 
  KHJ34387.1 356 RTQNLLQRQLSKWTERTQKLRDGSEEKLlnakirmeelkqvhrnltderaekgreiekkrihieqtEKKMSDLKESIENEIHNAH 440
                 5778888888888888888877777777888777777777777777777777788888888888888888888888888876655 PP

>> ApoC-I  Apolipoprotein C-I (ApoC-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.7   0.00025      0.74       4      30 ..     225     251 ..     222     257 .. 0.92
   2 ?   -1.1   0.0      0.62   1.9e+03       9      23 ..     269     283 ..     262     285 .. 0.80
   3 ?   -0.9   0.1      0.52   1.6e+03       3      27 ..     312     336 ..     310     341 .. 0.85
   4 ?   -2.9   0.3       2.3   6.8e+03      27      32 ..     415     420 ..     390     434 .. 0.53

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00025
                 TTSSC....HHHCHHHHHHHHHHCCHC CS
      ApoC-I   4 lesafeslpdklkEfgktledKaraai 30 
                 ++ +fe+ ++k  E++k le+K+ ++i
  KHJ34387.1 225 VSRRFENAKQKKNELTKALEEKTTEII 251
                 8999*******************9987 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.62
                 ....HHHCHHHHHHH CS
      ApoC-I   9 eslpdklkEfgktle 23 
                 + l+  l E+++tl 
  KHJ34387.1 269 AALQGSLTELSNTLT 283
                 578999*******96 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.52
                 -TTSSC....HHHCHHHHHHHHHHC CS
      ApoC-I   3 dlesafeslpdklkEfgktledKar 27 
                 d++s +++l+d + E++k+ e++ r
  KHJ34387.1 312 DVSSCIKQLEDIIIEISKEDEENKR 336
                 899999**********999888766 PP

  == domain 4  score: -2.9 bits;  conditional E-value: 2.3
                 CCHCCC CS
      ApoC-I  27 raaiee 32 
                 r  ie+
  KHJ34387.1 415 RIHIEQ 420
                 333433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2278  (0.127057); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        37  (0.0020637); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.96u 0.26s 00:00:01.22 Elapsed: 00:00:00.42
# Mc/sec: 3276.45
//
Query:       KHJ34388.1  [L=431]
Description: putative phosphomevalonate kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.9e-16   58.5   0.5    1.2e-15   57.5   0.1    1.7  2  GHMP_kinases_N  GHMP kinases N terminal domain
     0.0001   22.6   0.0    0.00022   21.5   0.0    1.5  1  GHMP_kinases_C  GHMP kinases C terminal


Domain annotation for each model (and alignments):
>> GHMP_kinases_N  GHMP kinases N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.5   0.1   1.3e-19   1.2e-15      10      65 ..     150     214 ..     143     215 .. 0.84
   2 ?   -3.5   0.0       1.4   1.3e+04      44      60 ..     360     378 ..     352     380 .. 0.55

  Alignments for each domain:
  == domain 1  score: 57.5 bits;  conditional E-value: 1.3e-19
                     TTSSSCHHHHHHHHHHHHHHHHTTEH...H..HH.....HHHHHHHHHHHHHHHHHSHHHHHHHHS CS
  GHMP_kinases_N  10 vgaGLGSSAAlavalvaAllallgls...l..ee.....aklaleaerlaqggngsggDvaasvyG 65 
                     +++GLGSSAAl++al++A+l ++ ++   l   +     ++la+  +++aq+++gsg+Dvaa+vyG
      KHJ34388.1 150 HKTGLGSSAALVTALTTAILLHF-IPtfdLciPMnrtkiHNLAQIVHCAAQKKVGSGFDVAAAVYG 214
                     689***************98888.443223442256789**************************9 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.4
                     HHHHHHHHHH..HHSHHHH CS
  GHMP_kinases_N  44 eaerlaqggn..gsggDva 60 
                     + e+ + g++   +g D+a
      KHJ34388.1 360 NVEEVISGVVpgAGGYDAA 378
                     4555565455334555554 PP

>> GHMP_kinases_C  GHMP kinases C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   2.4e-08   0.00022       9      68 ..     326     384 ..     305     396 .. 0.84

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 2.4e-08
  GHMP_kinases_C   9 dlellgellnlsqrselkavvgilppeleelleal.selG.algaklsGaGgGptvfalfkd 68 
                     ++e ++  ++++     +  v+i+ppe+++ll+a+  ++  +++++++GaGg+++ + l+++
      KHJ34388.1 326 SFEKIRHQIRQLSM---LSGVPIEPPEQTALLDAInTNVEeVISGVVPGAGGYDAAVLLVRE 384
                     55666667776666...779***************77777*******************944 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (431 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       457  (0.0254894); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3079.74
//
Query:       KHJ34389.1  [L=414]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.1e-11   42.9  10.5     0.0095   16.8   0.1    6.4  6  WD40         WD domain, G-beta repeat
  ------ inclusion threshold ------
      0.011   16.0   0.8        4.7    7.6   0.0    3.5  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.1   1.1e-06    0.0095       2      38 .]       7      44 ..       6      44 .. 0.94
   2 ?    3.8   0.0     0.013   1.2e+02       3      38 .]      50      85 ..      48      85 .. 0.80
   3 !    5.1   0.0    0.0052        47      10      31 ..     222     244 ..     181     248 .. 0.86
   4 !    5.8   0.0    0.0032        29      17      37 ..     288     308 ..     274     309 .. 0.82
   5 ?   -3.4   0.0         2   1.8e+04       6      17 ..     318     330 ..     314     338 .. 0.57
   6 !   12.4   0.5   2.5e-05      0.23      20      38 .]     394     412 ..     374     412 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 1.1e-06
                EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38
                q++++l+GH s ++ + f +++a l++G+  g v iWd
  KHJ34389.1  7 QPTYILRGHgSQIHKVTFIRSNARLVTGDVEGWVVIWD 44
                78999****777*************************9 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.013
                EEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS
        WD40  3 clrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38
                ++ ++++H  ++ +l     ++w    +++ ++D+++ +W+
  KHJ34389.1 50 PTAVWRAHqAPILGL-----NDWnfdkIITQGKDNKLLVWK 85
                6778999*8889999.....7777776777799*******5 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.0052
                 S.SSEEEEEEETTSSE.EEEEETT CS
        WD40  10 H.ssvtslafspdgaw.lasGsdD 31 
                 H +++ sla+ pd+++ l+sG  D
  KHJ34389.1 222 HtQPILSLAVAPDKTYyLTSGA-D 244
                 777899**********666666.7 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.0032
                 EEETTSSEEEEEETTSEEEEE CS
        WD40  17 afspdgawlasGsdDgtvriW 37 
                     dg+ +a++++Dg  r++
  KHJ34389.1 288 TIRNDGKIFATAGWDGRARVY 308
                 45689999***********98 PP

  == domain 5  score: -3.4 bits;  conditional E-value: 2
                 EEESS.SSEEEEE CS
        WD40   6 tltGH.ssvtsla 17 
                 +l+ H  + +++a
  KHJ34389.1 318 ILKWHkEGCYAVA 330
                 5555643355554 PP

  == domain 6  score: 12.4 bits;  conditional E-value: 2.5e-05
                 TTSSEEEEEETTSEEEEEE CS
        WD40  20 pdgawlasGsdDgtvriWd 38 
                 ++ +w+a G++Dg++ +Wd
  KHJ34389.1 394 HNTHWIAVGCKDGKISLWD 412
                 6789**************9 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.27   2.4e+03      37      80 ..      15      58 ..      11      69 .. 0.78
   2 ?    4.7   0.0    0.0041        37      43      79 ..     286     322 ..     264     335 .. 0.81
   3 ?    7.6   0.0   0.00052       4.7      48      68 ..     394     414 .]     378     414 .] 0.85

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.27
  ANAPC4_WD40 37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80
                 ++s+++++ +  ++  L+ +  +g v + d   ++    +++++
   KHJ34389.1 15 HGSQIHKVTFIRSNARLVTGDVEGWVVIWDLAIKRPTAVWRAHQ 58
                 68899999999999999999999999999887666666665555 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0041
  ANAPC4_WD40  43 sLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                  ++  ++dgk++a a  dg+ r+++ +  + +  l+ +
   KHJ34389.1 286 DITIRNDGKIFATAGWDGRARVYSCQALRELAILKWH 322
                  567799****************998876666655555 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.00052
  ANAPC4_WD40  48 pdgklLavaysdgevrlldae 68 
                  ++ + +av+++dg+++l d++
   KHJ34389.1 394 HNTHWIAVGCKDGKISLWDIY 414
                  67899************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 3055.19
//
Query:       KHJ34390.1  [L=626]
Description: putative gap2 amino acid permease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   4.3e-126  421.3  49.6    2.9e-66  224.0  13.8    2.2  2  AA_permease    Amino acid permease
    2.7e-36  125.3  36.4      6e-36  124.2  36.3    1.5  1  AA_permease_2  Amino acid permease


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.1  27.8   7.2e-64   6.4e-60       1     225 [.      83     314 ..      83     319 .. 0.90
   2 !  224.0  13.8   3.2e-70   2.9e-66     225     476 ..     332     586 ..     331     589 .. 0.97

  Alignments for each domain:
  == domain 1  score: 203.1 bits;  conditional E-value: 7.2e-64
  AA_permease   1 hvlvialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpelGfviGlnylfswitvlaleltaas 98 
                  h+++ia+gg iGtg+fv +g +ls++Gp+++++ay ++ + if+++++lge+a ++p++g+f++y++rfl+p++Gf++G+ny ++w++ l+le++aas
   KHJ34390.1  83 HMQMIAIGGCIGTGIFVTSGATLSTGGPASVVIAYFIMSILIFCTIQALGEMAALYPVAGSFSAYSTRFLDPAWGFAMGWNYAIQWLLILPLEIVAAS 180
                  99************************************************************************************************ PP

  AA_permease  99 iliqfwelvtdlpkawvtgavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkga................gfrflgdngs 180
                  i++++w ++++l  a++++ +fl v++iinl++v++ygeaefi+a+ik++a+++fi++giil++gg+p  ++                g    +++gs
   KHJ34390.1 181 ITLSYWPSMEKLQGAFGVS-IFLSVVIIINLCSVRGYGEAEFIFAIIKVVAVVSFIVLGIILNCGGGPDGEYiggrywvtnnvppnylGYLLGQKPGS 277
                  ******9999999888876.***************************************************9*5555555554444444444445555 PP

  AA_permease 181 ifknnlppgfakeeegafknfisvfvivvfaftGielvaiiagEv 225
                  i++  + +g        fk+++sv+v+++f+ftG+elv+++a+E+
   KHJ34390.1 278 IASGAFRAG--------FKGVCSVLVVAAFSFTGTELVGLAAAEA 314
                  555555555........9*************************97 PP

  == domain 2  score: 224.0 bits;  conditional E-value: 3.2e-70
  AA_permease 225 vkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasa.aspfvifikesgvsvlaplinaviltaalssansslysasRvlyslakd 321
                  +++P+ks+P ai+qv++ri ifY++sl +++llvp+ d  ll  sa+a aspfvi+i+++g+ +l++l+n+vil+a+ls++ns++y +sR+l +la++
   KHJ34390.1 332 LENPRKSLPTAIKQVFWRICIFYICSLTVVSLLVPYGDSRLLGNSADAkASPFVIAITNAGIEILPSLMNFVILIAVLSVGNSAVYGSSRTLAALAHQ 429
                  58*********************************************9************************************************** PP

  AA_permease 322 glaPkvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsylrfRkalkyqgrsieelgfkaallplgvilvl 419
                  g aP++l+++++rg+P+ ai +s+ ++ l++l+a+    a i+ ++l ++s+l+ +++w++i+l+++r+R a+k+qgrs++el +++++++ g++++l
   KHJ34390.1 430 GQAPRFLSYIDRRGRPIIAICVSSTVGSLSFLVAGGPDMAGIALKWLYSVSGLSSILTWGSICLAHIRYRAAWKAQGRSTKELTIRSQVGIVGSWIGL 527
                  ***********************************99999********************************************************** PP

  AA_permease 420 aaliiillilalyay..ltvkkgpkdwgaasfaaaylivllfliilvgvklhvknkrpq 476
                  +++ ++l++++++a+  + +++ pk+     f++ay++v+ +li+++ +k+++k+++ +
   KHJ34390.1 528 FLNFSVLVAQFWIALwpIGFGTRPKYEIMKGFLQAYSTVPFVLIFYISYKVYYKTSFMK 586
                  **************955667899*******************************99876 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.2  36.3   6.7e-40     6e-36       8     405 ..      86     540 ..      81     556 .. 0.84

  Alignments for each domain:
  == domain 1  score: 124.2 bits;  conditional E-value: 6.7e-40
  AA_permease_2   8 alvigsvigsgifvkn..laasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkvaflsawfnwfayvpvlasilsvaas 101
                    +++ig +ig+gifv++   + +ggpa++++  +++ i++++ + ++ E++++ p  g  + y+ ++  + ++f ++w +++++++ l++ +++a  
     KHJ34390.1  86 MIAIGGCIGTGIFVTSgaTLSTGGPASVVIAYFIMSILIFCTIQALGEMAALYPVAGSFSAYSTRFLDPAWGFAMGWNYAIQWLLILPLEIVAASI 181
                    689*************9766669999777777777777788999999****************************************998888877 PP

  AA_permease_2 102 yllnalgpdlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl.............stetdt... 181
                    +l + + p++  ++ +  + ++++l +v++in++++++++ + +i +i+k+ + ++ +i+lg+i+ +ggg + +             +    +   
     KHJ34390.1 182 TLSY-W-PSM--EKLQGAFGVSIFLSVVIIINLCSVRGYGEAEFIFAIIKV-VAVVSFIVLGIILNCGGGPDGEyiggrywvtnnvpP----Nylg 268
                    7777.5.888..567899999******************************.68899999**********998888877655554440....0455 PP

  AA_permease_2 182 .............ffpngwpgvllgllivlwsfdGfesaanvseevk..................k..kdvpkaifigllivlvlyllvniaflgv 244
                                  f  g +gv ++l ++++sf+G e +   + e+                   +  k +p ai  ++  ++++y+    ++   
     KHJ34390.1 269 yllgqkpgsiasgAFRAGFKGVCSVLVVAAFSFTGTELVGLAAAEAGeslnlstlsdkakkflleNprKSLPTAIKQVFWRICIFYICSLTVVSLL 364
                    555555566665577778889999***************9999996666778888888999999856478*****999999999999888888888 PP

  AA_permease_2 245 vpddeianlsnlgsv....aalffeavggkvvaiivvilialsllgaintavigssrvlealardgvlPrffakvnkfgspiraiiltaivslill 336
                    vp +    l+n+ ++    + +   ++g  ++ ++++++i +++l  +n+av+gssr+l ala +g  Prf++ ++++g+pi ai+++ +v ++ +
     KHJ34390.1 365 VPYGDSRLLGNSADAkaspFVIAITNAGIEILPSLMNFVILIAVLSVGNSAVYGSSRTLAALAHQGQAPRFLSYIDRRGRPIIAICVSSTVGSLSF 460
                    898888555554443323399999999999**************************************************************7776 PP

  AA_permease_2 337 llfllas...saaynfllsvsslgliisyllliigalilrkkrphlkr.pgk.........ilvaiigalfllfllvalffp 405
                     l+++++   + a+ +l svs l++i+ ++ + ++ + +r   + ++r   k         i+ ++ig+++++ +lva f++
     KHJ34390.1 461 -LVAGGPdmaGIALKWLYSVSGLSSILTWGSICLAHIRYRAAWKAQGRsT-KeltirsqvgIVGSWIGLFLNFSVLVAQFWI 540
                    .55555667788999*************************9999998851.3344455656677788888888888888864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (626 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       674  (0.0375927); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 4405.48
//
Query:       KHJ34391.1  [L=183]
Description: putative adp-ribosylation factor family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-44  151.8   0.1    1.4e-44  151.6   0.1    1.0  1  Arf           ADP-ribosylation factor family
    1.2e-19   70.5   0.0    1.4e-19   70.3   0.0    1.1  1  Ras           Ras family
      3e-16   59.7   0.0    4.7e-16   59.1   0.0    1.3  1  Roc           Ras of Complex, Roc, domain of DAPkinase
    2.6e-08   33.9   0.0    3.7e-08   33.4   0.0    1.3  1  MMR_HSR1      50S ribosome-binding GTPase
      6e-08   32.3   0.0    7.4e-08   32.0   0.0    1.2  1  Gtr1_RagA     Gtr1/RagA G protein conserved region
    8.4e-08   31.9   0.0    1.1e-07   31.5   0.0    1.2  1  SRPRB         Signal recognition particle receptor beta subun
    2.6e-07   30.1   0.2    1.5e-06   27.6   0.0    2.1  2  G-alpha       G-protein alpha subunit
    0.00025   20.6   0.0      0.033   13.7   0.0    2.1  2  GTP_EFTU      Elongation factor Tu GTP binding domain
     0.0013   18.8   0.0      0.031   14.3   0.0    2.1  2  Dynamin_N     Dynamin family
  ------ inclusion threshold ------
      0.012   15.2   1.5      0.062   12.8   1.5    1.9  1  FeoB_N        Ferrous iron transport protein B
      0.045   13.5   0.1       0.29   10.9   0.0    2.1  3  PduV-EutP     Ethanolamine utilisation - propanediol utilisat
      0.045   13.8   0.1      0.081   12.9   0.1    1.4  1  MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain
      0.064   13.8   0.1      0.073   13.6   0.1    1.4  1  ABC_tran      ABC transporter
       0.13   12.2   0.6        7.7    6.5   0.3    2.3  2  DUF1979       Domain of unknown function (DUF1979)
       0.14   12.7   0.0       0.24   11.9   0.0    1.4  1  AAA_18        AAA domain


Domain annotation for each model (and alignments):
>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.6   0.1   1.2e-47   1.4e-44      11     173 ..      17     179 ..       6     181 .. 0.95

  Alignments for each domain:
  == domain 1  score: 151.6 bits;  conditional E-value: 1.2e-47
                 .TTEEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEEEEEEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHC CS
         Arf  11 kkkelrilllGLDnaGKtTilkklkleelvt.tvPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkall 108
                 + +el i ++GL naGKt +lk l  +e +   +PT+gfn+++++  ++++++wD+GGq + R +W++Y ++++a++fvvD++d + l  ak+eL+ ll
  KHJ34391.1  17 WAMELNITIVGLQNAGKTSLLKVLAGDEYTIdSTPTVGFNMRRVTKGHVTLKCWDIGGQPRFRTMWERYCRDVNAIVFVVDCSDMNSLPVAKDELHLLL 115
                 37899********************99976439****************************************************************** PP

                 TSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHHHHHHH CS
         Arf 109 eeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewlse 173
                 e++ l+ ++llvl+NK Dl e ls +el e+l+l +++ +r+++  + sa + ++l+  l+wl+ 
  KHJ34391.1 116 ENSSLNGIPLLVLGNKSDLGEKLSVDELIETLDLMKIS-QREVSCYGISAKEETNLDAVLKWLVA 179
                 **************************************.************************86 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.3   0.0   1.1e-22   1.4e-19       2     158 ..      23     179 ..      22     183 .] 0.84

  Alignments for each domain:
  == domain 1  score: 70.3 bits;  conditional E-value: 1.1e-22
                 EEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHHH CS
         Ras   2 lvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikrv 100
                 + +vG ++ GKtsll   + d+++ ++++T+g++      +v + +v+l+ wD  Gq +f+++ e y rd+++i+ v d ++ +s+  +k+ ++ + + 
  KHJ34391.1  23 ITIVGLQNAGKTSLLKVLAGDEYTIDSTPTVGFNMR----RVTKGHVTLKCWDIGGQPRFRTMWERYCRDVNAIVFVVDCSDMNSLPVAKDELHLLLEN 117
                 679****************************88765....467889********************************************766666666 PP

                 ST.TTSEEEEEEETTTGGGG-SS-H.HHHHHHH..HHHTSEEEEEBTTTTCTHHHHHHHHHH CS
         Ras 101 ae.envpivLvGnKvDleekravst.eegeela..kelglkfletSAktnenveeafeellr 158
                  + + +p++++GnK+Dl ek  v++  e  +l   ++ ++  + +SAk+++n++ +++ l+ 
  KHJ34391.1 118 SSlNGIPLLVLGNKSDLGEKLSVDElIETLDLMkiSQREVSCYGISAKEETNLDAVLKWLVA 179
                 66699**************6666542234444411344588899***********9998876 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.1   0.0   3.9e-19   4.7e-16       2     119 ..      23     133 ..      22     134 .. 0.79

  Alignments for each domain:
  == domain 1  score: 59.1 bits;  conditional E-value: 3.9e-19
                 EEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEEGHHHHCH...HH CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvydsrssenl...ke 97 
                 + +vG +++GKtsllk +  d+++ ++++t+g ++ +  vt  k         +v+l++WD++Gq rfr++ + y+r+ +++++v+d ++ ++l   k+
  KHJ34391.1  23 ITIVGLQNAGKTSLLKVLAGDEYTIDSTPTVGFNMRR--VT--K--------GHVTLKCWDIGGQPRFRTMWERYCRDVNAIVFVVDCSDMNSLpvaKD 109
                 789******************************9964..42..3........3699*******************************766665512233 PP

                 .HHHHHHHH.CSSS-EEEEEE-TT CS
         Roc  98 .Wlkelkkv.agkspvilvgnkiD 119
                      l++   + +p++++gnk D
  KHJ34391.1 110 eLHLLLENSsLNGIPLLVLGNKSD 133
                 0333333331345699999***99 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.4   0.0   3.1e-11   3.7e-08       2     113 ..      23     130 ..      22     131 .. 0.70

  Alignments for each domain:
  == domain 1  score: 33.4 bits;  conditional E-value: 3.1e-11
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT..TTCSHHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflaleeadlillvvdas..eeklkpldeele 98 
                 + ivG  N+GK++L++ l g++  + ++p  T   n +rv++++  ++ +D+ G        + + +++++  ++++i++vvd+s  +    p+ ++  
  KHJ34391.1  23 ITIVGLQNAGKTSLLKVLAGDEYTIDSTP--TVGFNMRRVTKGHVTLKCWDIGGQPR----FRTMWERYCR--DVNAIVFVVDCSdmN--SLPVAKDEL 111
                 89*******************99999999..566677777756689********333....3355566664..689*******99532..334444433 PP

                 HHHHH....TTSEEEEEEE CS
    MMR_HSR1  99 ellee....akkplilvln 113
                  ll e    +++pl+++ n
  KHJ34391.1 112 HLLLEnsslNGIPLLVLGN 130
                 3333335556666666555 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.0   0.0   6.2e-11   7.4e-08       4     129 ..      25     140 ..      22     171 .. 0.70

  Alignments for each domain:
  == domain 1  score: 32.0 bits;  conditional E-value: 6.2e-11
   Gtr1_RagA   4 LmGksgsGKtsmrsiiFdnylardtlrl..gatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesre.leedletlk 99 
                 ++G +++GKts+ +++       d  ++  + t+  +  +v + g++tl+ wD+gGq +f +       e+  r+v+++++V+D+++ + l+ +     
  KHJ34391.1  25 IVGLQNAGKTSLLKVLA-----GDEYTIdsTPTVGFNMRRV-TKGHVTLKCWDIGGQPRFRTMW-----ERYCRDVNAIVFVVDCSDMNsLPVAK---- 108
                 78**********99874.....4444440045566667777.6899************998875.....8999*************553344444.... PP

   Gtr1_RagA 100 eilealrqys..peakvfvlihKmDliqeder 129
                 + l+ l ++s  + + + vl +K Dl ++   
  KHJ34391.1 109 DELHLLLENSslNGIPLLVLGNKSDLGEKLSV 140
                 44444444441145666777777777665554 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0     9e-11   1.1e-07       6     124 ..      23     134 ..      19     166 .. 0.81

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 9e-11
                 EEEE-STTSSHHHHHHHHHHSS---B---SS-EEETTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHHHHHHH CS
       SRPRB   6 vllvGlsdsGKTslftrLttdsvkktvtSqessaalkvksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEllyeill 104
                 + +vGl+++GKTsl++ L  d+++   t        +v ++ + +l+  D+ G+ ++r+   e+  + + + ++vfvvD +    +   vA    ++ll
  KHJ34391.1  23 ITIVGLQNAGKTSLLKVLAGDEYTIDSTPTVGFNMRRV-TKGHVTLKCWDIGGQPRFRTM-WER--YCRDVNAIVFVVDCSDM--NSLPVAKDELHLLL 115
                 789******************99777666655555566.5667788999*********85.566..6999*********8743..44455655567777 PP

                 HHHHHTT---EEEEEE-TTS CS
       SRPRB 105 iteklkdavdiliACnKqel 124
                 ++  + +++++l+  nK++l
  KHJ34391.1 116 ENS-SLNGIPLLVLGNKSDL 134
                 776.679***********97 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1      0.23   2.8e+02      23      42 ..      20      39 ..      18      46 .. 0.88
   2 !   27.6   0.0   1.3e-09   1.5e-06     186     244 ..      50     107 ..      41     179 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.23
                EEEEEEEESTTSSHHHHHHH CS
     G-alpha 23 evkllllGqseSGKsTilkq 42
                e+++ ++G +  GK+++lk 
  KHJ34391.1 20 ELNITIVGLQNAGKTSLLKV 39
                57899************996 PP

  == domain 2  score: 27.6 bits;  conditional E-value: 1.3e-09
                 ----SEEEEEEECT-TEEEEEEEE-SSHHHHHGTCCCTTTECEEEEEEEGGGTT-B-SS CS
     G-alpha 186 lktvGisetkfevdsklefrivdvgGqrserkkWvpffddvdaiiFlvslsefdqvlye 244
                 ++tvG++  ++  +  ++++ +d+gGq   r  W+ +  dv+ai+F+v +s+ + +   
  KHJ34391.1  50 TPTVGFNMRRVTKG-HVTLKCWDIGGQPRFRTMWERYCRDVNAIVFVVDCSDMNSLPVA 107
                 67999999998666.99***********************************9985443 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.1    0.0071       8.5       4      32 ..      21      49 ..      19      62 .. 0.84
   2 !   13.7   0.0   2.7e-05     0.033      66     189 ..      61     178 ..      42     182 .. 0.72

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0071
                EEEEEEESTTSSHHHHHHHHHHHTTSSCH CS
    GTP_EFTU  4 rnigiighvDhGKtTLtdrLlyktgaisk 32
                +ni+i+g  ++GKt+L+  L  +  +i++
  KHJ34391.1 21 LNITIVGLQNAGKTSLLKVLAGDEYTIDS 49
                69***************999877666665 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 2.7e-05
                 TCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB.....STHHHHHHHHHHHHTTTEEEEEEESCGST.HHHHHHHHHHHHHHHHHHHHHHH CS
    GTP_EFTU  66 etkkylinliDtPGHvdFskevirglrvlDgavlvvdaveG.....vepqteevlrlalkegvpiivfiNKmDrl.kaelkeiveevkqklsrkeekle 158
                 ++ + ++++ D  G   F    +r  r ++  v+vvd+++       +     +l+  + +g+p+ v+ NK D   k +++e++e++   +        
  KHJ34391.1  61 TKGHVTLKCWDIGGQPRFRTMWERYCRDVNAIVFVVDCSDMnslpvAKDELHLLLENSSLNGIPLLVLGNKSDLGeKLSVDELIETLD-LM-------- 150
                 4556678889999**************************8777754555555566677889999*********986666666666666.22........ PP

                 HHHHTTTTTEEEEEEBTTTTBTHHHHHHHHH CS
    GTP_EFTU 159 kygekgekevpvvfgSalkgegvktllealv 189
                 k+  ++ +ev+++ +Sa++  +++++l+ lv
  KHJ34391.1 151 KI--SQ-REVSCYGISAKEETNLDAVLKWLV 178
                 22..22.257888888888888888877665 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   2.6e-05     0.031       1      28 [.      23      50 ..      23      66 .. 0.83
   2 ?    2.7   0.0     0.094   1.1e+02     120     140 ..      80     100 ..      52     128 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.6e-05
                EEEEEBTTTTHHHHHHHHHTS--S---S CS
   Dynamin_N  1 iavvGsqSsGKSSvlnaLlgedilprgp 28
                i++vG q++GK+S+l  L g+++   ++
  KHJ34391.1 23 ITIVGLQNAGKTSLLKVLAGDEYTIDST 50
                789******************9766555 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.094
                 HHHHHHHSTTEEEEEEEETTS CS
   Dynamin_N 120 elvkeyikkadiilavtsanh 140
                  + ++y+++ ++i++v++++ 
  KHJ34391.1  80 TMWERYCRDVNAIVFVVDCSD 100
                 8999************99875 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   1.5   5.2e-05     0.062       2      57 ..      22      75 ..      21     177 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 5.2e-05
                EEEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEEEEEEETTEEEEEEE---- CS
      FeoB_N  2 tvalvGnpnvGkttlfnaltgakqkvgNwpGvtvekkegklklkgkeveivDlPGi 57
                ++++vG +n+Gkt+l+  l+g + ++   p v  +    +++  + +++  D+ G 
  KHJ34391.1 22 NITIVGLQNAGKTSLLKVLAGDEYTIDSTPTVGFNM--RRVTKGHVTLKCWDIGGQ 75
                6899*******************9999877555544..444444666777776665 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00024      0.29       3      37 ..      22      56 ..      20      66 .. 0.89
   2 ?   -1.2   0.0       1.3   1.5e+03      89     113 ..      86     109 ..      75     114 .. 0.57
   3 ?   -1.7   0.0       1.8   2.2e+03     123     141 ..     159     177 ..     131     178 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00024
   PduV-EutP  3 killiGkvgsGKttLtqalkgeelkYkktqaiefs 37
                +i ++G  ++GKt+L + l g+e + ++t ++ f+
  KHJ34391.1 22 NITIVGLQNAGKTSLLKVLAGDEYTIDSTPTVGFN 56
                57899******************999999998876 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.3
   PduV-EutP  89 nkeviGiitkidlaedeenieavee 113
                 +++v  i+  +d + d++++ ++++
  KHJ34391.1  86 CRDVNAIVFVVDCS-DMNSLPVAKD 109
                 45555555555555.5555555555 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 1.8
   PduV-EutP 123 ifevsavekegieellkyl 141
                  + +sa e+++++ +lk+l
  KHJ34391.1 159 CYGISAKEETNLDAVLKWL 177
                 4778888888888887765 PP

>> MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.1   6.8e-05     0.081      43      98 ..     109     175 ..      85     179 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 6.8e-05
  MMR_HSR1_Xtn  43 Ddlidvieg.nrvYipclyvlNKiDlisleeldelare..........pnsvviSaekelnldeLke 98 
                   D+l   +e+ + + ip l++ NK Dl ++ ++del ++           ++  iSa++e+nld++++
    KHJ34391.1 109 DELHLLLENsSLNGIPLLVLGNKSDLGEKLSVDELIETldlmkisqreVSCYGISAKEETNLDAVLK 175
                   5555556542446699**********777777777775556666654336666**********9875 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   6.1e-05     0.073      14      37 ..      23      46 ..      18     164 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 6.1e-05
                EEEEESTTSSHHHHHHHHTTSS-- CS
                xxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 14 vaivGenGaGKStLlkllagllkp 37
                + ivG   aGK++Llk+lag +  
  KHJ34391.1 23 ITIVGLQNAGKTSLLKVLAGDEYT 46
                789*****************9876 PP

>> DUF1979  Domain of unknown function (DUF1979)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.3    0.0064       7.7      43      54 ..       5      16 ..       3      18 .. 0.91
   2 ?    3.5   0.0     0.054        65      26      51 ..     153     178 ..     147     181 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0064
     DUF1979 43 feavysWLlrGf 54
                f+ +y+WLlr f
  KHJ34391.1  5 FQKIYDWLLRLF 16
                9*********87 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.054
     DUF1979  26 sefkmtsrGieraaersfeavysWLl 51 
                 s+  +   Gi    e   +av +WL+
  KHJ34391.1 153 SQREVSCYGISAKEETNLDAVLKWLV 178
                 55566778999999***********7 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0    0.0002      0.24       1      55 [.      23      84 ..      23     103 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.0002
      AAA_18  1 IlltGtpGvGKttlakeLskrlgf........gvnlrdvakenglllevdpealdeskrlded 55
                I + G + +GKt+l k L+  + +        g+n r v k + +l ++d    ++++ + e 
  KHJ34391.1 23 ITIVGLQNAGKTSLLKVLAGDE-YtidstptvGFNMRRVTKGHVTLKCWDIGGQPRFRTMWER 84
                89****************8875.5569999999999999999999888888866666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (183 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 1361.14
//
Query:       KHJ34392.1  [L=242]
Description: hypothetical protein EV44_g3601 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1909.69
//
Query:       KHJ34393.1  [L=340]
Description: putative c2h2 transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00036   21.1   0.2     0.0015   19.1   0.2    2.1  1  FOXP-CC          FOXP coiled-coil domain
     0.0056   17.1   2.2     0.0056   17.1   2.2    3.4  3  zf-C2H2          Zinc finger, C2H2 type
  ------ inclusion threshold ------
      0.054   13.9   1.3      0.054   13.9   1.3    3.9  4  zf-H2C2_2        Zinc-finger double domain
       0.09   13.3   0.2       0.09   13.3   0.2    2.2  2  Integrin_B_tail  Integrin beta tail domain
        1.6    9.2  11.4        1.8    9.1   0.7    3.0  2  zf-met           Zinc-finger of C2H2 type
          8    7.6  20.0       0.31   12.0   1.4    3.6  4  zf-C2H2_4        C2H2-type zinc finger


Domain annotation for each model (and alignments):
>> FOXP-CC  FOXP coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.2   5.1e-07    0.0015       6      30 ..     194     218 ..     190     232 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 5.1e-07
     FOXP-CC   6 vCkWPgCekvledveeflkhlnseH 30 
                  C WPgC+k ++ ++++ +hl+++ 
  KHJ34393.1 194 SCSWPGCHKKFTRSDNMKQHLETHT 218
                 6********************8754 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1       3.2   9.5e+03      15      23 .]      27      35 ..      26      35 .. 0.84
   2 !    7.5   6.3     0.002       6.1       1      23 []     160     187 ..     160     187 .. 0.86
   3 !   17.1   2.2   1.9e-06    0.0056       3      23 .]     195     217 ..     194     217 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 3.2
                HHHHHHHCC CS
     zf-C2H2 15 nLkrHirtH 23
                +L++H + H
  KHJ34393.1 27 SLVSHASYH 35
                6999*9988 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.002
                 EEET.....TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCp.....dCgksFkrksnLkrHirtH 23 
                 y+C      +C k+F+++ +  rH ++H
  KHJ34393.1 160 YPCRfrdshHCQKTFTTSGHASRHSKIH 187
                 566666667***************9998 PP

  == domain 3  score: 17.1 bits;  conditional E-value: 1.9e-06
                 ET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   3 Cp..dCgksFkrksnLkrHirtH 23 
                 C+  +C+k+F+r++n+k+H+ tH
  KHJ34393.1 195 CSwpGCHKKFTRSDNMKQHLETH 217
                 77779****************99 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1         6   1.8e+04       2       9 ..      28      35 ..      27      37 .. 0.79
   2 ?    1.9   2.0      0.12   3.6e+02       9      26 .]     154     176 ..     146     176 .. 0.75
   3 ?   13.9   1.3   1.8e-05     0.054       3      26 .]     181     206 ..     180     206 .. 0.95
   4 ?    2.0   0.4      0.11   3.3e+02       1      13 [.     209     221 ..     209     224 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 6
   zf-H2C2_2  2 LrrHirkH 9 
                L+ H   H
  KHJ34393.1 28 LVSHASYH 35
                88998888 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.12
   zf-H2C2_2   9 HtgekpyeCp.....lCdkaFkt 26 
                  + +k+y C       C k+F+t
  KHJ34393.1 154 ERAPKRYPCRfrdshHCQKTFTT 176
                 44688999999999899999986 PP

  == domain 3  score: 13.9 bits;  conditional E-value: 1.8e-05
   zf-H2C2_2   3 rrHirkHtgekpyeCp..lCdkaFkt 26 
                 +rH + Ht ek + C+   C+k+F++
  KHJ34393.1 181 SRHSKIHTAEKGVSCSwpGCHKKFTR 206
                 69***************99*****85 PP

  == domain 4  score: 2.0 bits;  conditional E-value: 0.11
   zf-H2C2_2   1 nLrrHirkHtgek 13 
                 n ++H+ +Ht+e+
  KHJ34393.1 209 NMKQHLETHTKER 221
                 6789******996 PP

>> Integrin_B_tail  Integrin beta tail domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.4       1.5   4.4e+03      26      29 ..     106     109 ..      83     134 .. 0.54
   2 ?   13.3   0.2     3e-05      0.09      43      78 ..     157     192 ..     142     199 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.5
  Integrin_B_tail  26 kCke 29 
                       Ck+
       KHJ34393.1 106 ICKD 109
                      3332 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 3e-05
  Integrin_B_tail  43 ekakkCkekdeddCvvtftyeedeegksevevqkek 78 
                       k   C+++d+++C  tft + +++++s+++  ++ 
       KHJ34393.1 157 PKRYPCRFRDSHHCQKTFTTSGHASRHSKIHTAEKG 192
                      56789*******************999999987764 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   4.2     0.039   1.2e+02       6      25 .]     170     187 ..     169     187 .. 0.93
   2 ?    9.1   0.7    0.0006       1.8       6      21 ..     200     215 ..     199     218 .. 0.92

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.039
      zf-met   6 CnvtfnsesqlksHlqGKkH 25 
                 C++tf+  +++  H  +K H
  KHJ34393.1 170 CQKTFTTSGHASRH--SKIH 187
                 **************..8877 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0006
      zf-met   6 CnvtfnsesqlksHlq 21 
                 C+++f+   ++k+Hl 
  KHJ34393.1 200 CHKKFTRSDNMKQHLE 215
                 **************97 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1         6   1.8e+04      13      23 ..      25      35 ..      24      36 .. 0.73
   2 ?   -2.1   0.0       3.5     1e+04       5      14 ..      62      70 ..      61      78 .. 0.67
   3 ?    6.0   4.1    0.0085        25       4      23 ..     168     187 ..     160     188 .. 0.88
   4 ?   12.0   1.4    0.0001      0.31       3      23 ..     195     217 ..     193     218 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 6
   zf-C2H2_4 13 kkaLlrHlkth 23
                 ++L +H   h
  KHJ34393.1 25 VQSLVSHASYH 35
                57889998777 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 3.5
   zf-C2H2_4  5 iCgksFsskk 14
                 C+++Fs +k
  KHJ34393.1 62 SCDAPFS-PK 70
                5999995.43 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0085
   zf-C2H2_4   4 piCgksFsskkaLlrHlkth 23 
                 ++C+k+F+++ + +rH k h
  KHJ34393.1 168 HHCQKTFTTSGHASRHSKIH 187
                 47******99999***9998 PP

  == domain 4  score: 12.0 bits;  conditional E-value: 0.0001
   zf-C2H2_4   3 Cpi..CgksFsskkaLlrHlkth 23 
                 C++  C+k F++++++++Hl+th
  KHJ34393.1 195 CSWpgCHKKFTRSDNMKQHLETH 217
                 66666*****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       710  (0.0396006); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 2699.63
//
Query:       KHJ34394.1  [L=434]
Description: putative related to pif1-dna helicase involved in mitochondrial dna repair and telomere length control [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.1e-42  144.7   6.5    1.8e-32  112.9   0.1    2.9  2  PIF1             PIF1-like helicase
    7.3e-17   61.7   0.0      1e-16   61.2   0.0    1.2  1  AAA_30           AAA domain
    1.1e-10   42.0   0.0    2.6e-10   40.8   0.0    1.7  1  AAA_19           AAA domain
      7e-07   29.6   0.0    1.4e-06   28.6   0.0    1.4  1  AAA_22           AAA domain
    3.4e-05   23.6   0.0    9.2e-05   22.2   0.0    1.7  1  UvrD_C_2         UvrD-like helicase C-terminal domain
    0.00012   21.9   0.0       0.04   13.7   0.0    3.2  2  Viral_helicase1  Viral (Superfamily 1) RNA helicase
    0.00088   19.7   0.0     0.0015   18.9   0.0    1.4  1  AAA              ATPase family associated with various cellul
     0.0072   16.3   0.5      0.094   12.6   0.5    2.2  1  ATPase_2         ATPase domain predominantly from Archaea
     0.0074   16.3   0.1      0.054   13.5   0.1    2.3  1  AAA_5            AAA domain (dynein-related subfamily)
      0.008   16.6   0.0      0.013   15.9   0.0    1.4  1  AAA_16           AAA ATPase domain
     0.0093   15.2   0.0      0.014   14.6   0.0    1.2  1  DUF2075          Uncharacterized conserved protein (DUF2075)
  ------ inclusion threshold ------
      0.016   14.7   0.2       0.04   13.4   0.0    1.7  2  AAA_7            P-loop containing dynein motor region
      0.016   15.0   0.2        1.8    8.3   0.0    2.8  3  AAA_11           AAA domain
      0.036   12.0   1.3      0.058   11.3   0.0    1.9  3  Herpes_Helicase  Helicase
      0.039   13.8   0.3       0.21   11.4   0.3    2.1  1  Helicase_RecD    Helicase
      0.042   13.0   0.0      0.074   12.2   0.0    1.4  1  NB-ARC           NB-ARC domain
       0.12   11.9   0.0       0.18   11.3   0.0    1.4  1  UvrD-helicase    UvrD/REP helicase N-terminal domain


Domain annotation for each model (and alignments):
>> PIF1  PIF1-like helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.9   0.1   1.7e-35   1.8e-32      23     191 ..      17     186 ..       2     212 .. 0.88
   2 !   29.8   4.1   3.2e-10   3.3e-07     266     363 ..     225     302 ..     192     303 .. 0.72

  Alignments for each domain:
  == domain 1  score: 112.9 bits;  conditional E-value: 1.7e-35
                 S-EEEEESTTSSCHHHHHHHHHHCHCTCC....CEEEEESSHHHHHCC.TSEECHHHHT-TTSSS-HHHH.HHHTSCCCHHHHHC-SEEEEECGGGSBH CS
        PIF1  23 klfFvtGsgGtgKtflwkallkklrsegk....ivlavAssGvAalllegGrtahsrfkiplekdeestc.kikrgsklaellkktsliiwDEapmver 116
                 k++F tG +G gK+f++ +++k lr++ +     v+++As+G Aa l+ +G+t+h ++++++e+++ + +   ++++  a+ + +++++i+DE++m++ 
  KHJ34394.1  17 KSVFCTGGAGCGKSFVLSNVVKRLRAKYNtypgAVVVTASTGSAAFLI-HGITLHRFAGVGIEENNLELMiGKAKSKINARNWRRVKILIIDEISMISS 114
                 689**********************9765233379*************.9****************999856666777899****************** PP

                 HHHHHHHHHHHHHCT-...-SCCCC-EEEEE--TTS-----SSSSS---BGC...CSCHHHH..--EEEE-S-STTT CS
        PIF1 117 ecfealdrtlrdilkekeidkpFGGktvvlgGDfrQilPviekgsraeivaasikeSklWke..vkvlkLtknmRll 191
                 +++++l  +++ i+ +   ++pFGG+ + l GDf Q++P++  g r +i +a   eS +W    +kv+ L+   R  
  KHJ34394.1 115 TLLDNLSLVAQRIRAN---NEPFGGIRLLLFGDFLQLPPISFLGFRGHISRA--FESTVWADlnMKVIDLKGHNRYG 186
                 ***************8...78*******************************..9*****98667799999877765 PP

  == domain 2  score: 29.8 bits;  conditional E-value: 3.2e-10
                 ..EEEESSCCHHHHHHHHHHCCSSS--EEEE-EEE...........ESBSSCHHCHHHCCTTSS-SCEEE-TT-EEEE-S--CTT-SC-TCEEEEEEE CS
        PIF1 266 erailcptnedvdeiNnyvlsklpgeekeylssDsisksseeieeldalypteflnslkanglpnhvLkLkvGvpvmllrNldqsaGLcNGtrlivtq 363
                 e ++l++++++v++ N y+ls+l+ e    +s+D                     +sl  ++ +++ L+Lk+G++vml+rN+++   L+NG+ +++++
  KHJ34394.1 225 EPVRLYARKDKVSRYNSYRLSQLKTECVVLESTDI------------------GTESLLSQCPVEKNLQLKIGAQVMLVRNINNV--LVNGSVGTLVE 302
                 34566666666666666666666666666666665..................2578999***********************99..*****988776 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.2   0.0   9.9e-20     1e-16       3     173 ..       2     202 ..       1     217 [. 0.78

  Alignments for each domain:
  == domain 1  score: 61.2 bits;  conditional E-value: 9.9e-20
      AAA_30   3 naeQaaavealltsgdrvavltGpAGtGKttalkalreaweaa.g...grviglAptgkaAkvLa.......eelgieastiakllkrlk...grarle 87 
                 +++Q +a +a + ++ + ++ tG+AG GK+++l+ +++ ++a+ +   g v++ A+tg aA  +        +++gie ++++ ++ + k   ++ +++
  KHJ34394.1   2 DKSQLEAYNACVYGD-KSVFCTGGAGCGKSFVLSNVVKRLRAKyNtypGAVVVTASTGSAAFLIHgitlhrfAGVGIEENNLELMIGKAKskiNARNWR 99 
                 678999998776666.699**************999888887745888**************99977777766999**********9999**9767889 PP

      AAA_30  88 pgtllivDEagmvdtkqlaallkaaeka........gakvilvGDerQlasVeaGgvlrdlvea........agigtaeLtevvRqke.seeraaalal 169
                 + ++li+DE++m++++ l++l   a++         g++++l GD  Ql++++  g   ++ +a         +++++ L+   R+ +    +++  +l
  KHJ34394.1 100 RVKILIIDEISMISSTLLDNLSLVAQRIrannepfgGIRLLLFGDFLQLPPISFLGFRGHISRAfestvwadLNMKVIDLKGHNRYGNnFVLADVLSRL 198
                 99*************9999987777663456899988***************86444444433333334433355777777777775546666666666 PP

      AAA_30 170 regd 173
                 r+g 
  KHJ34394.1 199 RKGS 202
                 6665 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.0   2.5e-13   2.6e-10       8     143 ..      14     150 ..       5     153 .. 0.75

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 2.5e-13
      AAA_19   8 lkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgaeatTiHrlalldfddlltealelle....eaeeekklqe 102
                   +k ++ t+G+G+GK+ vl  +v+ l +  +  p  +++ a tg Aa  ++           T+Hr+a +++++ +   lel+     ++ + ++ ++
  KHJ34394.1  14 YGDKSVFCTGGAGCGKSFVLSNVVKRLRAKYNTYPGAVVVTASTGSAAFLIHG---------ITLHRFAGVGIEENN---LELMIgkakSKINARNWRR 100
                 55788999***************************************987774.........37****998888776...3333334544444555656 PP

      AAA_19 103 eellivDEfqdvdelqyrLlkallgekkk.........lllvGDpdQliy 143
                  ++li+DE+++++ +    l+ ++++            lll+GD  Ql++
  KHJ34394.1 101 VKILIIDEISMISSTLLDNLSLVAQRIRAnnepfggirLLLFGDFLQLPP 150
                 66***********5554444444422221345899999*********997 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.0   1.3e-09   1.4e-06       5     129 ..      16     143 ..      13     148 .. 0.74

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 1.3e-09
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevv..fvtlpsstsskdl.lrel.lralglelkaerlsseellealeqalrarav..iellii 97 
                 ++++++tG +G+GK+++l +++++l +       +  ++   v +++st+s+ +  + + l+ +   +  e++++e ++ +    ++ar    +++lii
  KHJ34394.1  16 DKSVFCTGGAGCGKSFVLSNVVKRLRA-------KYNTYpgAVVVTASTGSAAFlIHGItLHRFAGVGI-EENNLELMIGKAKSKINARNWrrVKILII 106
                 67899********************54.......44444666666666655666244441233333333.357777777999999999988899***** PP

      AAA_22  98 DEaqhlrseealeeL.....rsllnl.srkgvqliLvG 129
                 DE+  + s ++l +L     r+++n+    g++l+L+G
  KHJ34394.1 107 DEISMI-SSTLLDNLslvaqRIRANNePFGGIRLLLFG 143
                 ******.9888888855566666777888888888887 PP

>> UvrD_C_2  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   8.8e-08   9.2e-05       2      44 ..     355     390 ..     354     393 .. 0.78

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 8.8e-08
    UvrD_C_2   2 ayaltihkaQGsefpaVivfdpdlaaarmgelrrrlLYtavTR 44 
                 a+a+tihk+QG   p Viv d++   ++ g       Y+a++R
  KHJ34394.1 355 AWAITIHKSQGRTIPRVIV-DMEGVFEE-G-----QCYVALSR 390
                 8******************.55555544.3.....36888888 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   3.8e-05      0.04       4      81 ..      22     119 ..      19     214 .. 0.72
   2 ?    4.4   0.0     0.026        27     185     225 ..     357     390 ..     326     394 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 3.8e-05
  Viral_helicase1   4 hGvpGcGKStlirkllrts..........liltvnrptaelltegk...........pklpnlsvrtvdsflmalvkstkgkililDEylllha 76 
                       G +GcGKS ++ ++++            +++t+++ +a+ l +g            +++  l +  ++s  +a+ ++ + kili+DE+ +  +
       KHJ34394.1  22 TGGAGCGKSFVLSNVVKRLrakyntypgaVVVTASTGSAAFLIHGItlhrfagvgieENNLELMIGKAKSKINARNWR-RVKILIIDEISMISS 114
                      699***********9999886655555555555555555555555599999999877444444555577777777776.8999*****999988 PP

  Viral_helicase1  77 Gyill 81 
                       +++ 
       KHJ34394.1 115 TLLDN 119
                      77765 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.026
  Viral_helicase1 185 vttvhevqGltfdkVtlvllketdlelisesrenllvAlTR 225
                      + t h  qG t ++V++  +          ++ +++vAl+R
       KHJ34394.1 357 AITIHKSQGRTIPRVIVDMEGVF-------EEGQCYVALSR 390
                      6899***********99888443.......25689*****9 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   1.5e-06    0.0015       4      73 ..      22     115 ..      19     130 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1.5e-06
                 ESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSS..................STTHHHHHHHHHHHHHHHTS......TSEEEEEETGGGHHHH CS
         AAA   4 yGppGtGKTllakavakelgvefleisgsellsk..................yvgesekkirelfkeakeka......kpsilfiDEidalaks 73 
                 +G  G+GK+ + + v+k l +++ +  g+ ++                     vg  e++++ ++ +ak+k       + +il+iDEi  + ++
  KHJ34394.1  22 TGGAGCGKSFVLSNVVKRLRAKYNTYPGAVVVTAstgsaaflihgitlhrfaGVGIEENNLELMIGKAKSKInarnwrRVKILIIDEISMISST 115
                 7999**************97775444444444223455555555666666669***************98878999*666********988765 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.5   8.9e-05     0.094      23     139 ..      19     120 ..      14     129 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 8.9e-05
    ATPase_2  23 yfiYGpegsGKtaLlkeiienledkdkyviyyialreesiskldefieeeeekkklekalgiavpkaeleeilkeksklvfkaielllekikkkgkk.. 119
                 +f +G  g+GK+ +l +++++l+   ky  y  a+   +++    f         +   ++ ++  + +      + ++++  i +++ ki+ +  +  
  KHJ34394.1  19 VFCTGGAGCGKSFVLSNVVKRLRA--KYNTYPGAVVVTASTGSAAF--------LIHGITLHRFAGVGI------EENNLELMIGKAKSKINARNWRrv 101
                 78999*****************55..77888888777777777777........455555666666666......4478899**********9998888 PP

    ATPase_2 120 iiiiiDelqklidlglngae 139
                  i+iiDe+ ++ +  l+ + 
  KHJ34394.1 102 KILIIDEISMISSTLLD-NL 120
                 89********9977776.44 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.1   5.1e-05     0.054       2      95 ..      19     129 ..      18     198 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 5.1e-05
                 EEEE--SSSSHHHHHHHGGGGBS--EEE....EE--TT--HHH.HH--B--.................--------...........G-SEEEEESGGG CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnrevey....vqltrdtteed.lkgrreik........ngttslvdsplvraar...........egeilvlDEver 76 
                 v+  G  G+gKs++   + ++l++++++    v  t++t ++  l+ ++ +         +      + +l+  ++           + +il++DE+ +
  KHJ34394.1  19 VFCTGGAGCGKSFVLSNVVKRLRAKYNTypgaVVVTASTGSAAfLIHGITLHrfagvgieE-----NNLELM-IGKakskinarnwrRVKILIIDEISM 111
                 6678999******999999999665555111145566665554256666666888544443.....444444.33344556699999************ PP

                 --HHHHHHHHHHHHSSEEE CS
       AAA_5  77 aesevlnsLlslleerrll 95 
                 ++s  l+ L sl  +r + 
  KHJ34394.1 112 ISSTLLDNL-SLVAQRIRA 129
                 *******99.666666655 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.3e-05     0.013      20      58 ..      13      55 ..       4     132 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.3e-05
      AAA_16 20 rsgrpelvllsGesGvGKsslvrellralekd.....ggiflrg 58
                  g+  +v+++G +G+GKs ++  + ++l+++     g++++++
  KHJ34394.1 13 VYGD-KSVFCTGGAGCGKSFVLSNVVKRLRAKyntypGAVVVTA 55
                5555.79********************99999777765555444 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   1.3e-05     0.014       3      96 ..      18     108 ..      16     112 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.3e-05
     DUF2075   3 vvlVtGvaGtGKtvvllnllael.eddeeertavylsvNhplvlvlrealakkeekkkkkeafeklssfinnlsefkkaeekkeepkedvvivDE 96 
                  v+ tG+aG GK+ vl+n++ +l  + + +  av+++ +    + l + ++ ++     + + ++l+ +i +++   ++++ ++ ++++++i+DE
  KHJ34394.1  18 SVFCTGGAGCGKSFVLSNVVKRLrAKYNTYPGAVVVTASTGSAAFLIHGITLHR-FAGVGIEENNLELMIGKAK---SKINARNWRRVKILIIDE 108
                 5899*******************7666677777777777777777777777777.5566666666777777777...777777788888888887 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   3.8e-05      0.04      28      63 ..      11      45 ..       6      63 .. 0.78
   2 ?   -3.7   0.1       6.9   7.3e+03      28      44 ..     283     299 ..     282     299 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.8e-05
       AAA_7 28 lllknkkpvllvGptGtGKtviikdllkkldkekyl 63
                 ++  +k+v+++G +G+GK+ ++++++k+l   ky+
  KHJ34394.1 11 ACVYGDKSVFCTGGAGCGKSFVLSNVVKRLR-AKYN 45
                5677899*********************999.4443 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 6.9
       AAA_7  28 lllknkkpvllvGptGt 44 
                 +l++n ++vl+ G++Gt
  KHJ34394.1 283 MLVRNINNVLVNGSVGT 299
                 57889999999999998 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0    0.0017       1.8       3      61 ..       2      55 ..       1      67 [. 0.81
   2 ?    3.5   0.0     0.049        51     243     257 ..     137     151 ..      88     153 .. 0.69
   3 ?   -2.6   0.0       3.6   3.8e+03      70     106 ..     194     229 ..     188     256 .. 0.63

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0017
      AAA_11  3 ndsqreaiksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCa 61
                ++sq+ea + ++  ++ +   G  G+gK++++  ++++l      ++ ++++  + v+a
  KHJ34394.1  2 DKSQLEAYNACVYGDKSVFCTGGAGCGKSFVLSNVVKRLR-----AKYNTYPGAVVVTA 55
                789************99999*******************3.....34445555555544 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.049
      AAA_11 243 kkvvLvGDpkQLpat 257
                  +++L GD  QLp++
  KHJ34394.1 137 IRLLLFGDFLQLPPI 151
                 6999*********97 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 3.6
      AAA_11  70 llerllrglldsegekykpkivRvgneeeriseavks 106
                 +l+rl +g ++ e  +y  ++vR +  e ++ e v+ 
  KHJ34394.1 194 VLSRLRKGSHNVEDTNYIKNLVRTVTYE-DSIEPVRL 229
                 5667767777777777777777777666.23333333 PP

>> Herpes_Helicase  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2      0.73   7.7e+02      63      83 ..      20      40 ..      17      64 .. 0.73
   2 ?   -3.9   0.0       2.3   2.4e+03     190     210 ..      97     117 ..      88     119 .. 0.78
   3 ?   11.3   0.0   5.5e-05     0.058     733     776 ..     357     398 ..     346     423 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.73
  Herpes_Helicase 63 litGtAGaGkstsiqalaenl 83
                       tG AG Gks  ++ + + l
       KHJ34394.1 20 FCTGGAGCGKSFVLSNVVKRL 40
                     579*******98777665554 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 2.3
  Herpes_Helicase 190 eltesnviviDEaGllsrhiL 210
                      +  +  +++iDE  ++s+ +L
       KHJ34394.1  97 NWRRVKILIIDEISMISSTLL 117
                      45677899********99988 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 5.5e-05
  Herpes_Helicase 733 amtiaksqGlslekvAicFgnhknlklssvYvalsRatdseflv 776
                      a+ti ksqG  + +v ++          + YvalsR  d   + 
       KHJ34394.1 357 AITIHKSQGRTIPRVIVDMEGV--FEEGQCYVALSRCPDDSKMQ 398
                      89****************9876..99**********98765543 PP

>> Helicase_RecD  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.3    0.0002      0.21       3     111 ..      22     121 ..      20     129 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0002
  Helicase_RecD   3 tAdRGRGKSaalGlalaaliaegk...snilvtapskenvktlfeflakglealglkeeekkkkaekaelrvrkqrieyiapdellklkeqadllv 95 
                    t++ G GKS +l  ++++l a+ +     ++vta + +++  +     + +  +g++e++      + ++ + k++i+    ++      + ++l+
     KHJ34394.1  22 TGGAGCGKSFVLSNVVKRLRAKYNtypGAVVVTASTGSAAFLIHGITLHRFAGVGIEENN-----LELMIGKAKSKIN---ARNWR----RVKILI 105
                    78889*************99997788899********99988888888888887766432.....3233333444443...22222....347999 PP

  Helicase_RecD  96 vDEAAaiplpllkkll 111
                    +DE ++i  +ll++l 
     KHJ34394.1 106 IDEISMISSTLLDNLS 121
                    9999999999999885 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     7e-05     0.074      22      68 ..      18      64 ..       9     127 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 7e-05
                EEEEEESTTSSHHHHHHHHCCSHCCCCCCBTEEEEEEEESXXHHHHH CS
      NB-ARC 22 vvalvGmgGvGKttlakqilnksdevegrFdsvawvvvsktdkseei 68
                 v+  G +G+GK+ +++++++ +    +++++ + v+ s  +    i
  KHJ34394.1 18 SVFCTGGAGCGKSFVLSNVVKRLRAKYNTYPGAVVVTASTGSAAFLI 64
                58899***************************999988876655444 PP

>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00017      0.18       7      58 ..      10      61 ..       1     127 [. 0.83

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00017
                   HHHHS-SSEEEEEE-TTSSHHHHHHHHHHHHHHTSSSTGGGEEEEESSHHHH CS
  UvrD-helicase  7 eaiaslggpilveAsAGsGKTfvlaerilrlikeeeiepdrilvvTFTnkAa 58
                   +a +   ++++   +AG GK+fvl +++ rl ++ ++ p  ++v   T  Aa
     KHJ34394.1 10 NACVYGDKSVFCTGGAGCGKSFVLSNVVKRLRAKYNTYPGAVVVTASTGSAA 61
                   3444477889999**************9999999988888888888777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 3228.51
//
Query:       KHJ34395.1  [L=479]
Description: putative prp31 c terminal domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.8e-73  244.4   0.0    1.3e-72  244.0   0.0    1.1  1  Nop       snoRNA binding domain, fibrillarin
    1.4e-45  155.1   0.7    2.4e-45  154.3   0.7    1.4  1  Prp31_C   Prp31 C terminal domain
  ------ inclusion threshold ------
       0.05   13.8   0.1       0.31   11.2   0.0    2.1  2  NAGPA     Phosphodiester glycosidase


Domain annotation for each model (and alignments):
>> Nop  snoRNA binding domain, fibrillarin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  244.0   0.0   2.2e-76   1.3e-72       2     230 .]      23     265 ..      22     265 .. 0.90

  Alignments for each domain:
  == domain 1  score: 244.0 bits;  conditional E-value: 2.2e-76
                 HHHHHHHHHHHHHHHHHHHTTTSTCHHHHS-SHHHHHHHHHHCCC......CHCCT.HHTT............HH..HHHHHHHHHHCHHHH-SSS-S- CS
         Nop   2 ldeidkeintlhkrvrewYswhFpELeslvkdnleYakvvklign......eredlekkee...........dee..lakevimaakvtastsmgaels 81 
                 ++eid+ei  +hk++r++Ys +FpELe+lv+++l+Yakvv +ign      +       ++           +++  l+   +m+++v+a+t++g+e++
  KHJ34395.1  23 STEIDHEIMVVHKFIRDHYSIRFPELETLVTNPLDYAKVVTIIGNgpmdgeS------IKAlqnskdnkigvTLRsvLDGPSVMIVTVEATTTKGREMT 115
                 689******************************************6665442......2222223345677733346********************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHCHHHHHHHHHHHHSSHHHHHCS-HHHHTTTT-HHHHCCCHHT-.--SSSCHHHCSHH CS
         Nop  82 eedlknikelcdrvleleelrkelleYlesrmsaiAPNlsaLvGeevaarLishaGgLtnLakmPastiqilGaekalfralkkk.ntpkyGliyhsel 179
                 +++l++++++cd++l l+++r++l++Y++ rm+++APNl+aL+G+ +aa+L++ aGgLt Lak+Pa++++ lG++k++++  +++  ++++G++y s++
  KHJ34395.1 116 PKELERVMRACDMALALDKARRSLTDYVRARMNVFAPNLTALIGSLTAAQLLNFAGGLTGLAKTPACNLAPLGSKKQIQTGFATNvGVRQQGYLYYSPI 214
                 ****************************************************************************99999986569************ PP

                 HHHTS-CCCHHHHHHHHHHHHHHHHHHH.HTT----SHHHHHHHHHHHHHHH CS
         Nop 180 vqkatppklkkkiaRllaaKvalaaRiD.afsekdgslGkklreeiekklkk 230
                 ++  +p++lk++++R+++aKv+laaR+D   +++dgs+G++l++ + ++l+k
  KHJ34395.1 215 IR-GIPNDLKRQAMRIVSAKVVLAARVDrVHNSPDGSTGEALKAACLERLEK 265
                 *9.88***********************6444566**************996 PP

>> Prp31_C  Prp31 C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.3   0.7   4.1e-49   2.4e-45       1     120 []     272     428 ..     272     428 .. 0.93

  Alignments for each domain:
  == domain 1  score: 154.3 bits;  conditional E-value: 4.1e-49
     Prp31_C   1 akekkaLpaPddkpkkkRGGrraRkaKerlamtelrkaqNRmaFGkeeeevgq..gdetgkglGmlgkkasgriraaqvdkktkaklskkl........ 89 
                 +k+ +aLpaPddkp++kRGGrraRkaKe++amt+lrkaqNRm FGkee+evg+  g e++kglGm+g++++grir++q+d++tkakls+k+        
  KHJ34395.1 272 NKGIRALPAPDDKPARKRGGRRARKAKEATAMTDLRKAQNRMIFGKEEKEVGYgtG-ESTKGLGMIGQANDGRIRNLQIDQRTKAKLSAKNkgwggatp 369
                 5899*************************************************633.4459******************************99999999 PP

     Prp31_C  90 ......................kkklqrssgvg......sgtasslaftpvqglelvnP 120
                                       + k+ r+sgvg      sgtasslaftpv gl+lv+P
  KHJ34395.1 370 lvggaisslrgfgqgvgsgidlRGKGLRTSGVGstigpeSGTASSLAFTPVTGLNLVDP 428
                 999999999999999999999988888888666889999*******************9 PP

>> NAGPA  Phosphodiester glycosidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   5.2e-05      0.31      53     137 ..      52     133 ..      28     148 .. 0.80
   2 ?   -0.4   0.0       0.2   1.2e+03      94     116 ..     335     357 ..     290     362 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.2e-05
       NAGPA  53 slqeldeanvkeavgagplLvkngkivktsadggsgrapRtaiGvtadg.tllllvvdg..rqsaGatlkelaellkklGavnAlnLD 137
                  +++ld a+v +++g gp+  +  k+ ++s+d++ g+  R+++    dg +++ ++v+   ++++ +t kel +++++  ++ Al LD
  KHJ34395.1  52 VTNPLDYAKVVTIIGNGPMDGESIKALQNSKDNKIGVTLRSVL----DGpSVMIVTVEAttTKGREMTPKELERVMRA--CDMALALD 133
                 5677777899999999995445555667899998777777775....88899999999964444************66..99999999 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.2
       NAGPA  94 aiGvtadgtllllvvdgrqsaGa 116
                 +iG+  dg++  l +d r +a +
  KHJ34395.1 335 MIGQANDGRIRNLQIDQRTKAKL 357
                 79999999999999998766554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.21s 00:00:00.70 Elapsed: 00:00:00.37
# Mc/sec: 3913.00
//
Query:       KHJ34396.1  [L=122]
Description: putative pre-mrna-processing factor 31 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.29   11.4   2.7       0.52   10.5   2.7    1.3  1  MPM1         Mitochondrial peculiar membrane protein 1
        3.4    7.0  13.3        3.8    6.8  13.3    1.0  1  SDA1         SDA1


Domain annotation for each model (and alignments):
>> MPM1  Mitochondrial peculiar membrane protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.7   5.8e-05      0.52     108     171 .]      37     111 ..      13     111 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 5.8e-05
        MPM1 108 e........ktkedlmlkkssek.dskkkvvssssktsvntteegn.eeklkevkt.yfddgtvkvkkikkikpv 171
                 +         ++e+++l++++e+ d++ +v+s  +++s+n ++e+n + ++++++    dd  +  +k+kki+pv
  KHJ34396.1  37 DsngiifhdVSRESMELDDDEEAdDDEDQVMSGVETSSLNVQDEDNmKANVEKMELgAVDDVRSVARKMKKIEPV 111
                 134556664455666666666665668899999999999988887713567777778999999999999999985 PP

>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8  13.3   0.00042       3.8      91     172 ..      13      89 ..       3     115 .. 0.41

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.00042
        SDA1  91 eeedsddeddeedwevesdddseedsegg.widvesdeeeieesdesedeeeeeeeeeekeekeeeeeeeeeeeeeeeeeeee 172
                 e++d +ded+ + +e  s+d  ++ds+g  + dv+   e++e +d   dee +++e++     e ++ +  ++e++ + + e+
  KHJ34396.1  13 EDSDPEDEDNRQAQESLSKDGVSSDSNGIiFHDVSR--ESMELDD---DEEADDDEDQVMSGVETSSLNV-QDEDNMKANVEK 89 
                 333333444444455444443356664443444443..3333333...3333333222222222222222.233333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1053  (0.0587317); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 906.99
//
Query:       KHJ34397.1  [L=452]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       795  (0.0443416); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3430.27
//
Query:       KHJ34398.1  [L=177]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (177 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.21s 00:00:00.59 Elapsed: 00:00:00.35
# Mc/sec: 1519.66
//
Query:       KHJ34399.1  [L=269]
Description: hypothetical protein EV44_g3815 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       212  (0.0118244); expected 358.6 (0.02)
Passed bias filter:                      191  (0.0106531); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.18s 00:00:00.57 Elapsed: 00:00:00.32
# Mc/sec: 2500.12
//
Query:       KHJ34400.1  [L=475]
Description: hypothetical protein EV44_g5227 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.8e-20   72.8   0.8    1.8e-20   72.8   0.8    2.5  2  DnaJ           DnaJ domain
  ------ inclusion threshold ------
        3.9    7.5  23.6       0.98    9.4  19.7    1.8  2  Asp-B-Hydro_N  Aspartyl beta-hydroxylase N-terminal region


Domain annotation for each model (and alignments):
>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.8   0.8     2e-24   1.8e-20       1      63 []       8      73 ..       8      73 .. 0.92
   2 ?   -6.9   8.7         2   1.8e+04      26      60 ..     181     215 ..     160     218 .. 0.68

  Alignments for each domain:
  == domain 1  score: 72.8 bits;  conditional E-value: 2e-24
                HHHHHHTSSTTG-HHHHHHHHHHHHHHHSTTTSCCHH.HHHH..HHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ  1 dyYeiLgvskdasedeIkkaYrklalkyHPDknpkdp.eaee..kFkeineAyevLsdpekRkqYD 63
                dyY++Lgvs++a++ eI+ aYrkl+lk+HPDk ++ + +a +  +F++++eAye L+++++R++YD
  KHJ34400.1  8 DYYNVLGVSNKATSTEIRTAYRKLILKCHPDKIQDASlRAVKqvEFQKVQEAYENLCEDKSRREYD 73
                8********************************888884444459********************9 PP

  == domain 2  score: -6.9 bits;  conditional E-value: 2
                 HHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHH CS
        DnaJ  26 lkyHPDknpkdpeaeekFkeineAyevLsdpekRk 60 
                 +++   +++k++ea+++ ke +eA   L  +++++
  KHJ34400.1 181 KEMEENRKKKEEEAKQRHKEKEEAKRRLARKKEKE 215
                 44544556677899999999999999998877665 PP

>> Asp-B-Hydro_N  Aspartyl beta-hydroxylase N-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.19   1.7e+03     135     161 ..      48      74 ..      14      97 .. 0.51
   2 ?    9.4  19.7   0.00011      0.98      77     183 ..     148     247 ..     121     287 .. 0.61

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.19
  Asp-B-Hydro_N 135 ekkllkedsderqeeleagkvkeevEe 161
                     k++  ++++e++e+l   k+ +e +e
     KHJ34400.1  48 VKQVEFQKVQEAYENLCEDKSRREYDE 74 
                    222222233333333333333333222 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00011
  Asp-B-Hydro_N  77 vpeeeaevvaeeeeqlaeekekqkveeevkEqlkkvkeeivvkeeeeegieeepqleeekkllkedsderqeeleagkvkeev.Eeslkveetvse 171
                     + + + v+ae++ + a+e+e +kv+ e+k + k+++e+  +keee++++++e+++++++   k++++ +  e+ + ++  +v E s  + +t + 
     KHJ34400.1 148 ESTKAESVKAESQKKKAREEEIRKVKAEIKRKQKEMEENRKKKEEEAKQRHKEKEEAKRRLARKKEKERK--EKRTRNSFVDVyEVSDDEYRTPRS 241
                    3446677888999999999999999999999999998888777766666666666554444444433333..333332222220222222222222 PP

  Asp-B-Hydro_N 172 eakkdmkekase 183
                     +kk        
     KHJ34400.1 242 SEKK------PG 247
                    2222......22 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (475 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3582  (0.199788); expected 358.6 (0.02)
Passed bias filter:                      891  (0.049696); expected 358.6 (0.02)
Passed Vit filter:                       285  (0.015896); expected 17.9 (0.001)
Passed Fwd filter:                        48  (0.00267723); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.11u 0.34s 00:00:01.45 Elapsed: 00:00:00.50
# Mc/sec: 2846.91
//
Query:       KHJ34401.1  [L=356]
Description: putative esterase-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.015   14.7   0.1      0.025   14.0   0.1    1.4  1  RRG8      Required for respiratory growth protein 8 mitochond


Domain annotation for each model (and alignments):
>> RRG8  Required for respiratory growth protein 8 mitochondrial
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   1.4e-06     0.025      64      98 ..      46      80 ..      11     134 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.4e-06
        RRG8 64 LknNlfaqLLasPmRsdkisklkvpkelLiqlKlr 98
                +++N++a+ La+P+R  +++ + +p+ +L+   + 
  KHJ34401.1 46 VRKNFYARALATPLRKCRLTGVIMPRFFLLDFIAI 80
                69***************************986554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       452  (0.0252106); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2604.36
//
Query:       KHJ34402.1  [L=111]
Description: hypothetical protein EV44_g3496 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1005  (0.0560544); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 861.59
//
Query:       KHJ34403.1  [L=125]
Description: hypothetical protein EV44_g0222 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.029   14.7   2.1      0.055   13.8   2.1    1.4  1  Syntaxin_2      Syntaxin-like protein
      0.035   14.0   3.2          1    9.3   0.2    3.2  2  Pox_A_type_inc  Viral A-type inclusion protein repeat
      0.039   14.0   1.4      0.049   13.7   1.4    1.2  1  Baculo_PEP_C    Baculovirus polyhedron envelope protein, PEP,
       0.04   13.9   3.2      0.085   12.9   3.2    1.7  1  MCC-bdg_PDZ     PDZ domain of MCC-2 bdg protein for Usher syn
       0.14   12.2   1.1       0.96    9.5   0.0    2.4  3  GUN4_N          ARM-like repeat domain, GUN4-N terminal
       0.18   12.3   0.4       0.48   10.9   0.1    1.9  2  HMA             Heavy-metal-associated domain
       0.21   11.9   3.4        2.1    8.7   0.5    2.6  2  TSC22           TSC-22/dip/bun family
       0.33   11.0   4.5       0.69    9.9   4.5    1.6  1  FlxA            FlxA-like protein
       0.46   10.5  12.0        2.2    8.3   2.3    2.1  2  TMF_DNA_bd      TATA element modulatory factor 1 DNA binding
        1.1   10.0   6.1        1.3    9.7   4.8    1.7  2  YabA            Initiation control protein YabA
        1.2    8.9   5.9        1.5    8.6   5.7    1.2  1  DUF724          Protein of unknown function (DUF724)


Domain annotation for each model (and alignments):
>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   2.1   3.4e-05     0.055       6      63 ..      48     106 ..      45     121 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 3.4e-05
  Syntaxin_2   6 qkinsnvstleklvkqLgtkk.dteelreklhelieeinelikktnellkklsqldnss 63 
                 +ki++++ +l +l+kqL++ k   e+lr ++++l + + + +k t  l  kls+ d++ 
  KHJ34403.1  48 TKISELTEQLSELTKQLSDHKlVEERLRMEIKDLNSAAIQNLKSTAVLEYKLSESDKKV 106
                 58999999999999999999866899999999999999999999998888888888776 PP

>> Pox_A_type_inc  Viral A-type inclusion protein repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.2   0.00063         1       6      19 ..      46      59 ..      45      62 .. 0.93
   2 ?    3.8   0.2     0.034        55       4      14 ..      72      82 ..      72      84 .. 0.88

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00063
  Pox_A_type_inc  6 lRsRIsDLErqLse 19
                    l+++Is+L  qLse
      KHJ34403.1 46 LKTKISELTEQLSE 59
                    8***********98 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.034
  Pox_A_type_inc  4 srlRsRIsDLE 14
                    +rlR +I DL 
      KHJ34403.1 72 ERLRMEIKDLN 82
                    69*******96 PP

>> Baculo_PEP_C  Baculovirus polyhedron envelope protein, PEP, C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   1.4     3e-05     0.049      32      99 ..      17      91 ..       5     100 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 3e-05
  Baculo_PEP_C 32 ilaqlatlldaietqLnalsedlksllaeldtrldtlltnLtdalnalq......dtlrneLtnlns.iltnLls 99
                  i a+  +   +i t+L +  ++   l+ +l+t++++l+++L++  ++l+      + lr e++ lns  + nL s
    KHJ34403.1 17 IEAASPKNRSEILTELYNSGKQYLGLSLDLKTKISELTEQLSELTKQLSdhklveERLRMEIKDLNSaAIQNLKS 91
                  555555566667777777777777777788888888877777777777777777799********9835888887 PP

>> MCC-bdg_PDZ  PDZ domain of MCC-2 bdg protein for Usher syndrome
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   3.2   5.2e-05     0.085       2      41 ..      46      85 ..      45     110 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 5.2e-05
  MCC-bdg_PDZ  2 LksrIeeLkaqnelLsltleerkqqseeLsldlgkaEsna 41
                 Lk++I eL+ q+  L++ l  +k   e+L + ++  +s a
   KHJ34403.1 46 LKTKISELTEQLSELTKQLSDHKLVEERLRMEIKDLNSAA 85
                 89********************************999543 PP

>> GUN4_N  ARM-like repeat domain, GUN4-N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00059      0.96      10      38 ..      10      38 ..       7      45 .. 0.89
   2 ?    0.5   0.1      0.38   6.2e+02      10      22 ..      50      62 ..      43      71 .. 0.61
   3 ?   -2.2   0.0       2.6   4.3e+03      10      25 ..      92     107 ..      82     110 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00059
                CHHHHHHCHHS-CCCHHHHHHHHCTSHHH CS
      GUN4_N 10 lseLrqqLesgsekkqlqaiaqLakaGee 38
                 ++L +++e++s k++ +++++L + G++
  KHJ34403.1 10 AADLISRIEAASPKNRSEILTELYNSGKQ 38
                57999********************9986 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.38
                CHHHHHHCHHS-C CS
      GUN4_N 10 lseLrqqLesgse 22
                +seL +qL++ ++
  KHJ34403.1 50 ISELTEQLSELTK 62
                5555555554433 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2.6
                 CHHHHHHCHHS-CCCH CS
      GUN4_N  10 lseLrqqLesgsekkq 25 
                  + L+++L++  +k +
  KHJ34403.1  92 TAVLEYKLSESDKKVK 107
                 4567777777766665 PP

>> HMA  Heavy-metal-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       2.8   4.6e+03      47      58 ..      48      59 ..      42      65 .. 0.60
   2 ?   10.9   0.1   0.00029      0.48      22      55 ..      77     109 ..      67     112 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2.8
         HMA 47 tklrkiieaiek 58
                tk++++ e++++
  KHJ34403.1 48 TKISELTEQLSE 59
                555666666555 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00029
         HMA  22 elpgVesvkvdlatktvtVegdaes.tklrkiiea 55 
                 e+++ +s+ +++ ++t++ e++ ++ +  +k++++
  KHJ34403.1  77 EIKDLNSAAIQNLKSTAVLEYKLSEsD--KKVKRK 109
                 78999****************777755..566665 PP

>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.5    0.0013       2.1      19      36 ..      46      63 ..      45      68 .. 0.90
   2 ?    3.3   0.1     0.061     1e+02      17      29 ..      72      84 ..      67     101 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0013
       TSC22 19 LkekIkeLeernseleeE 36
                Lk+kI eL+e+ sel ++
  KHJ34403.1 46 LKTKISELTEQLSELTKQ 63
                9*************9865 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.061
       TSC22 17 evLkekIkeLeer 29
                e L+ +Ik+L + 
  KHJ34403.1 72 ERLRMEIKDLNSA 84
                78********875 PP

>> FlxA  FlxA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   4.5   0.00043      0.69      15      39 ..      46      70 ..      34     109 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00043
        FlxA 15 sasqiasLqkQiknlqkqLkelses 39
                 +++i++L++Q+++l+kqL++ +  
  KHJ34403.1 46 LKTKISELTEQLSELTKQLSDHKLV 70
                4567777777777777777664433 PP

>> TMF_DNA_bd  TATA element modulatory factor 1 DNA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   2.3    0.0013       2.2      12      51 ..      27      66 ..      23      69 .. 0.66
   2 ?    7.0   2.9    0.0036       5.8      28      64 ..      71     107 ..      68     109 .. 0.92

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0013
  TMF_DNA_bd 12 eqIaqLmeEGekLskkelklnntikkLrkknkelekeike 51
                e++++L   G+++    l+l+++i++L ++++el+k++++
  KHJ34403.1 27 EILTELYNSGKQYLGLSLDLKTKISELTEQLSELTKQLSD 66
                6666666666666667777777777777777777777665 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0036
  TMF_DNA_bd  28 elklnntikkLrkknkelekeikelkkkleklekele 64 
                 e +l+  ik L++ + ++ k+ + l+ kl++++k+++
  KHJ34403.1  71 EERLRMEIKDLNSAAIQNLKSTAVLEYKLSESDKKVK 107
                 6789999***************************986 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.8     3e+03      66      80 ..      22      36 ..      15      39 .. 0.78
   2 ?    9.7   4.8   0.00081       1.3      12      74 ..      45     107 ..      37     113 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.8
                XXXXXXXXXXXXXXX CS
        YabA 66 lsegkenLarlYeeG 80
                 ++  e L++lY+ G
  KHJ34403.1 22 PKNRSEILTELYNSG 36
                566778899999988 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00081
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXXXXXXXXXXXXXX CS
        YabA  12 eleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekekkkelsegkenLa 74 
                 +l+++++el+e+l+el ++l++    +++L++e + l +   ++ k+++  + +lse+ ++++
  KHJ34403.1  45 DLKTKISELTEQLSELTKQLSDHKLVEERLRMEIKDLNSAAIQNLKSTAVLEYKLSESDKKVK 107
                 588999**************999999999****999999887777777777777777766655 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   5.7   0.00091       1.5      98     162 ..      44     108 ..      34     116 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00091
      DUF724  98 lslkdeqtklleerkklekkieeeesekrkleeeidelekkilelerqlallkekkeaadkeiar 162
                 l lk++ ++l e++++l k++++++  +++l  ei++l+++ ++  +  a+l  k +++dk+++r
  KHJ34403.1  44 LDLKTKISELTEQLSELTKQLSDHKLVEERLRMEIKDLNSAAIQNLKSTAVLEYKLSESDKKVKR 108
                 789*********************************99988777777777888777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1651  (0.0920854); expected 358.6 (0.02)
Passed bias filter:                      853  (0.0475766); expected 358.6 (0.02)
Passed Vit filter:                       116  (0.00646996); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 971.75
//
Query:       KHJ34404.1  [L=469]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      7e-16   58.3   6.3    1.7e-05   25.5   0.3    5.0  5  WD40          WD domain, G-beta repeat
    2.2e-09   37.5   2.5      0.024   14.9   0.0    4.7  5  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
    1.4e-07   31.6   1.4     0.0059   16.5   0.0    3.3  3  eIF2A         Eukaryotic translation initiation factor eIF2A
    9.9e-05   21.0   0.0     0.0063   15.1   0.0    2.5  2  Cytochrom_D1  Cytochrome D1 heme domain
  ------ inclusion threshold ------
      0.013   14.8   0.1        6.4    6.0   0.1    3.0  3  WD40_like     WD40-like domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   6.4e-07    0.0023       4      38 .]      20      53 ..      17      53 .. 0.84
   2 !   25.5   0.3   4.7e-09   1.7e-05       6      38 .]      62      95 ..      59      95 .. 0.93
   3 ?   -2.8   0.0       4.2   1.5e+04      18      31 ..     182     195 ..     177     202 .. 0.65
   4 !   10.1   0.1   0.00033       1.2      14      37 ..     276     300 ..     257     301 .. 0.74
   5 ?    3.5   0.0     0.042   1.5e+02      16      38 .]     321     344 ..     305     344 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 6.4e-07
                EEEEE.SSSSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  4 lrtlt.GHssvtslafspdgawlasGsdDgtvriWd 38
                +++l+ GH   ++++f++ g++la+G  Dgtv i+d
  KHJ34404.1 20 IGSLRsGH--TSCVRFNRKGDYLAAGRVDGTVVIFD 53
                55664499..56**************99******98 PP

  == domain 2  score: 25.5 bits;  conditional E-value: 4.7e-09
                EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38
                +l+GH   v sl++s++g++l+++s D ++ iWd
  KHJ34404.1 62 KLKGHvRQVQSLSWSRNGRYLLTSSQDWKCNIWD 95
                699**7779************************9 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 4.2
                 EETTSSEEEEEETT CS
        WD40  18 fspdgawlasGsdD 31 
                 f  +g  +++G+ +
  KHJ34404.1 182 FTASGEHILTGTNK 195
                 66777777888655 PP

  == domain 4  score: 10.1 bits;  conditional E-value: 0.00033
                 EEEEEETTSSEEEEEE.TTSEEEEE CS
        WD40  14 tslafspdgawlasGs.dDgtvriW 37 
                 +++afs+ g ++a+++  ++ ++iW
  KHJ34404.1 276 NHVAFSSTGEYVAASTyNNHDIYIW 300
                 5788********987526******* PP

  == domain 5  score: 3.5 bits;  conditional E-value: 0.042
                 EEEETTSSEEEEEE.TTSEEEEEE CS
        WD40  16 lafspdgawlasGs.dDgtvriWd 38 
                 + ++p+++++++++ + g +++W+
  KHJ34404.1 321 VEWHPHKPMIVACGlETGRIHMWS 344
                 459******998875899999995 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.0   3.5e-05      0.13      42      77 ..      29      64 ..      22      68 .. 0.88
   2 !   14.9   0.0   6.6e-06     0.024      39      80 ..      68     109 ..      63     117 .. 0.89
   3 ?    4.3   0.0     0.014        49      41      80 ..     177     216 ..     163     227 .. 0.81
   4 ?    1.2   0.1      0.13   4.7e+02      41      89 ..     275     323 ..     262     326 .. 0.67
   5 ?    0.2   0.0      0.26   9.3e+02      35      64 ..     312     342 ..     278     350 .. 0.45

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.5e-05
  ANAPC4_WD40 42 rsLaWkpdgklLavaysdgevrlldaesgkvvhsls 77
                 ++++++ +g  La +  dg+v ++d+e+  v ++l+
   KHJ34404.1 29 SCVRFNRKGDYLAAGRVDGTVVIFDVETNGVAKKLK 64
                 6899************************99988876 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 6.6e-06
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                  ++v+sL+W+ +g+ L  + +d ++++ d ++  +++s++ ++
   KHJ34404.1  68 RQVQSLSWSRNGRYLLTSSQDWKCNIWDLQNLCIIRSVRFEA 109
                  789****************************99999988776 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.014
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                   +   +  +g+ +  ++++g ++++d+ + +v+ s ++ +
   KHJ34404.1 177 TTVATFTASGEHILTGTNKGWLNIIDVATRTVIYSTKICT 216
                  455568899***********************99988765 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.13
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdg.evrlldaesgkvvhslsvksekavtclgW 89 
                   +++a++  g+  a ++ ++  + + + ++g +v+ l+  +e+   +++W
   KHJ34404.1 275 WNHVAFSSTGEYVAASTYNNhDIYIWERNHGSLVKILEGPKEE-HGMVEW 323
                  4556667788888877666647999999988888877655553.555555 PP

  == domain 5  score: 0.2 bits;  conditional E-value: 0.26
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklL.avaysdgevrl 64 
                  +++++e   ++W+p   ++ a + + g++++
   KHJ34404.1 312 EGPKEEHGMVEWHPHKPMIvACGLETGRIHM 342
                  2333333445566554433145555666655 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.6e-06    0.0059      95     169 ..      20      93 ..      12      99 .. 0.83
   2 ?    3.3   0.3     0.018        64     134     163 ..     165     194 ..     157     216 .. 0.76
   3 !    8.6   0.0   0.00043       1.5     102     160 ..     274     332 ..     261     349 .. 0.71

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.6e-06
                 EEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE..-TT--EEEE-TTSSEEEEEE-TTT-SS CS
       eIF2A  95 iskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakae..aanatlvewspdgryvlTattaprlrv 169
                 i +l++ +  ++ f+ kg +++    g + G++ i+dv++    +k++    +  ++ ws +gry+lT++  ++  +
  KHJ34404.1  20 IGSLRSGHTSCVRFNRKGDYLAA---GRVDGTVVIFDVETNGVAKKLKghVRQVQSLSWSRNGRYLLTSSQDWKCNI 93 
                 667888889999*******9986...578999*******776666665216678899**************999765 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.018
                 TTEEEEEEE-TT--EEEE-TTSSEEEEEE- CS
       eIF2A 134 kkkkiakaeaanatlvewspdgryvlTatt 163
                 + kk a+  ++++t+  +  +g+++lT t 
  KHJ34404.1 165 REKKAAQDAKQTTTVATFTASGEHILTGTN 194
                 44566666677788889**********986 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.00043
                 S--EEEE-TTSSEEEEE-TTSSS-EEEEEETT..TTEEEEEEE-TT--EEEE-TTSSEEEE CS
       eIF2A 102 krNtiffspkgklvllaGfgnlaGeleiwdvk..kkkkiakaeaanatlvewspdgryvlT 160
                 + N + fs++g++v+ + + n   ++ iw+++  ++ ki +  +++  +vew+p+  +++ 
  KHJ34404.1 274 SWNHVAFSSTGEYVAASTYNNH--DIYIWERNhgSLVKILEGPKEEHGMVEWHPHKPMIVA 332
                 5688888888888888888887..7888888744455555555666777888887766654 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   1.8e-06    0.0063      12      75 ..      44     107 ..      40     163 .. 0.91
   2 !    2.9   0.0    0.0086        31      60     115 ..     256     311 ..     247     339 .. 0.76

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1.8e-06
                   GGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE- CS
  Cytochrom_D1  12 rdagkvalldgdskeilavletgyalHisrvfasdgRyvyvigRDgkvtliDLwakeivaevki 75 
                   r +g v + d +++   ++l+++     s   +++gRy+++ + D k ++ DL +  i++ v+ 
    KHJ34404.1  44 RVDGTVVIFDVETNGVAKKLKGHVRQVQSLSWSRNGRYLLTSSQDWKCNIWDLQNLCIIRSVRF 107
                   67899***************************************************99999985 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.0086
                   EEEESSSSSEEEEEE-SSEEEEEEE--TTSEEEEEEEETTEEEEEETTT--EEEEE CS
  Cytochrom_D1  60 tliDLwakeivaevkiGlnarsvavSqddryvivgnYlPgqlvildaetLelvkvi 115
                   + iD+  +++ ++v+  l    va S  + yv++++Y   ++ i + +  +lvk++
    KHJ34404.1 256 DTIDIGIEHKFQDVVNKLSWNHVAFSSTGEYVAASTYNNHDIYIWERNHGSLVKIL 311
                   55666667777777777777788888888888888888888888877777777765 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.23   8.4e+02       6      33 ..      31      58 ..      30      65 .. 0.86
   2 ?    5.0   0.0    0.0035        13       3      38 ..      70     105 ..      68     127 .. 0.89
   3 ?    6.0   0.1    0.0018       6.4      10      72 ..     184     247 ..     179     270 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.23
   WD40_like  6 idiskkgslilyGgkddkctvlklesle 33
                + +++kg++++ G  d ++ ++++e++ 
  KHJ34404.1 31 VRFNRKGDYLAAGRVDGTVVIFDVETNG 58
                568999*****************99985 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0035
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsiv 38 
                 + s+  s++g ++l  ++d kc + +l++l+++ +v
  KHJ34404.1  70 VQSLSWSRNGRYLLTSSQDWKCNIWDLQNLCIIRSV 105
                 668899**************************9987 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.0018
   WD40_like  10 kkgslilyGgkddkctvlkleslesvsivesfedSvifvkl.ldddlilvvtlDGtillsllen 72 
                   g+ il G ++  + ++++ + +++++ +  +  vif++l + +  ++v   D  i + +l n
  KHJ34404.1 184 ASGEHILTGTNKGWLNIIDVATRTVIYSTKICTGVVIFMRLtIPGRDLVVNCQDRIIRTIQLPN 247
                 57899**********************************9735666777777787776666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       696  (0.0388198); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3421.83
//
Query:       KHJ34405.1  [L=535]
Description: putative glucose-repressible alcohol dehydrogenase transcriptional effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-08   32.8  14.0    4.2e-06   26.4   9.2    3.1  3  LRR_8     Leucine rich repeat
      0.001   19.4   6.4      0.001   19.4   6.4    4.0  5  LRR_4     Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
        7.8    6.8   6.6         13    6.2   0.8    2.8  2  LRR_6     Leucine Rich repeat


Domain annotation for each model (and alignments):
>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0   0.00051       3.1       5      28 ..     157     180 ..     156     182 .. 0.88
   2 !   26.4   9.2   7.1e-10   4.2e-06       5      61 .]     198     252 ..     190     257 .. 0.94
   3 ?   -3.8   0.0         2   1.2e+04      26      33 ..     268     275 ..     262     277 .. 0.52

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00051
                 EEE-TTS--SEE-TTSSTT-TT-- CS
       LRR_8   5 sLdLsnNrltslddeaFkglsnLk 28 
                 ++dLs+  ltsl+ ea k+ls+L+
  KHJ34405.1 157 IIDLSSQGLTSLPGEAIKQLSSLT 180
                 689999999999999999999997 PP

  == domain 2  score: 26.4 bits;  conditional E-value: 7.1e-10
                 EEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   5 sLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 +L L +N l+ l+ e F+ l++L+vL+L++N ++ lsp+ +s+L +L++L+Ls+Nr+
  KHJ34405.1 198 KLFLASNCLNTLPNELFN-LNHLEVLSLRSNFIHELSPK-ISNLLNLKELNLSQNRI 252
                 699***************.*****************976.56666**********97 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 2
                 T--EEE-- CS
       LRR_8  26 nLkvLdLs 33 
                 +L+ L+L 
  KHJ34405.1 268 SLEKLSLH 275
                 34444443 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       1.9   1.2e+04       8      14 ..     126     132 ..     125     138 .. 0.56
   2 ?    3.6   0.0     0.016        97       4      26 ..     156     180 ..     156     182 .. 0.70
   3 !   11.4   6.0   5.5e-05      0.33       5      40 ..     198     233 ..     197     238 .. 0.85
   4 !   19.4   6.4   1.7e-07     0.001       2      36 ..     218     252 ..     217     259 .. 0.91
   5 ?   -3.2   0.0       2.2   1.3e+04       3       9 ..     269     275 ..     268     277 .. 0.56

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.9
                 --SS--- CS
       LRR_4   8 LsnNqlt 14 
                 LsnN + 
  KHJ34405.1 126 LSNNSVI 132
                 6777533 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.016
                 -EEE--SS---E-S-HH..H-TT-- CS
       LRR_4   4 evLdLsnNqltdiplle..klpnLk 26 
                 e++dLs+  lt++p+ +  +l +L+
  KHJ34405.1 156 EIIDLSSQGLTSLPGEAikQLSSLT 180
                 5789**769******6621466655 PP

  == domain 3  score: 11.4 bits;  conditional E-value: 5.5e-05
                 EEE--SS---E-S-..HHH-TT--EEE-.-S-----GG CS
       LRR_4   5 vLdLsnNqltdipl..leklpnLkeLdLsgNnlitdld 40 
                 +L L++N+l ++p+  ++ l +L++L+L + n+i  l+
  KHJ34405.1 198 KLFLASNCLNTLPNelFN-LNHLEVLSL-RSNFIHELS 233
                 699***********9555.*********.666999886 PP

  == domain 4  score: 19.4 bits;  conditional E-value: 1.7e-07
                 S--EEE--SS---E-S-.HHH-TT--EEE-.-S--- CS
       LRR_4   2 nLevLdLsnNqltdipl.leklpnLkeLdLsgNnli 36 
                 +LevL+L++N + ++++ +++l nLkeL+Ls+N +i
  KHJ34405.1 218 HLEVLSLRSNFIHELSPkISNLLNLKELNLSQN-RI 252
                 69***************9778*********999.55 PP

  == domain 5  score: -3.2 bits;  conditional E-value: 2.2
                 --EEE-- CS
       LRR_4   3 LevLdLs 9  
                 Le+L+L+
  KHJ34405.1 269 LEKLSLH 275
                 6666665 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.6     0.026   1.6e+02       2      13 ..     216     227 ..     215     229 .. 0.90
   2 ?    6.2   0.8    0.0021        13       3      15 ..     240     252 ..     238     254 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.026
       LRR_6   2 nthLteLdLsgN 13 
                  +hL+ L+L++N
  KHJ34405.1 216 LNHLEVLSLRSN 227
                 58*********9 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0021
       LRR_6   3 thLteLdLsgNdI 15 
                  +L+eL+Ls N I
  KHJ34405.1 240 LNLKELNLSQNRI 252
                 58*********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3770.51
//
Query:       KHJ34406.1  [L=372]
Description: putative protein phosphatase pp1 regulatory subunit sds22 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.1e-31  107.4  35.5    1.5e-07   31.6   0.2    6.3  7  LRR_4        Leucine Rich repeats (2 copies)
    3.2e-20   71.7  35.0    8.5e-07   28.7   5.1    5.9  6  LRR_8        Leucine rich repeat
    1.2e-18   67.2  26.9    8.1e-09   35.2   2.9    3.9  5  LRR_9        Leucine-rich repeat
  ------ inclusion threshold ------
      0.019   15.0  32.1      0.099   12.7   0.5    8.2  9  LRR_6        Leucine Rich repeat
      0.055   13.6   1.2        3.5    7.8   0.0    2.7  2  CRAL_TRIO_2  Divergent CRAL/TRIO domain
        3.4    8.6  28.3        9.8    7.2   0.5    8.7  9  LRR_1        Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0034        10      22      42 ..     104     123 ..      84     125 .. 0.51
   2 !   16.5   0.7   2.7e-06    0.0082       4      41 ..     108     145 ..     105     149 .. 0.85
   3 !   21.9   4.9   5.5e-08   0.00016       3      41 ..     130     167 ..     128     171 .. 0.88
   4 !   21.5   4.4   7.8e-08   0.00023       1      43 [.     150     191 ..     150     193 .. 0.92
   5 !   31.6   0.2   5.1e-11   1.5e-07       1      43 [.     194     235 ..     194     236 .. 0.93
   6 !   30.7   3.3   9.6e-11   2.9e-07       2      43 ..     239     279 ..     238     280 .. 0.93
   7 !   25.2   0.5   5.2e-09   1.5e-05       2      42 ..     283     319 ..     282     324 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0034
                 -TT--EEE-.-S-----GGGG CS
       LRR_4  22 lpnLkeLdLsgNnlitdldeL 42 
                 +++ + L L + n it +++L
  KHJ34406.1 104 FKDVTRLCL-RQNSITEIEGL 123
                 555555545.33355555444 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 2.7e-06
                 -EEE--SS---E-S-HHH-TT.--EEE-.-S-----GGG CS
       LRR_4   4 evLdLsnNqltdiplleklpn.LkeLdLsgNnlitdlde 41 
                 + L+L++N +t+i++l+ l +  +eLdL +N li+ +  
  KHJ34406.1 108 TRLCLRQNSITEIEGLSCLAStITELDLYDN-LISHIRH 145
                 78***************88889******666.9987755 PP

  == domain 3  score: 21.9 bits;  conditional E-value: 5.5e-08
                 --EEE--SS---E-S-HHH-TT--EEE-.-S-----GGG CS
       LRR_4   3 LevLdLsnNqltdiplleklpnLkeLdLsgNnlitdlde 41 
                  ++LdL +N ++ i  l  l+nL++LdLs+N +i+ + +
  KHJ34406.1 130 ITELDLYDNLISHIRHLDDLTNLTSLDLSFN-KIKHIKN 167
                 589*************************888.8887765 PP

  == domain 4  score: 21.5 bits;  conditional E-value: 7.8e-08
                 SS--EEE--SS---E-S-HHH-TT--EEE-.-S-----GGGGX CS
       LRR_4   1 pnLevLdLsnNqltdiplleklpnLkeLdLsgNnlitdldeLk 43 
                 +nL++LdLs N+++ i +++ l++L+ L+  +N +i+ +++L+
  KHJ34406.1 150 TNLTSLDLSFNKIKHIKNISCLTSLTDLYFVQN-KISHIENLS 191
                 7*****************999********9899.999998886 PP

  == domain 5  score: 31.6 bits;  conditional E-value: 5.1e-11
                 SS--EEE--SS---E-S-HHH-TT--EEE-.-S-----GGGGX CS
       LRR_4   1 pnLevLdLsnNqltdiplleklpnLkeLdLsgNnlitdldeLk 43 
                 ++L++L L+ N++++i++le l+ L+eL+L g n+it +d+L+
  KHJ34406.1 194 TKLRNLELAANRIRKIEGLETLTGLEELWL-GKNKITEIDGLN 235
                 79*******88*******************.666******996 PP

  == domain 6  score: 30.7 bits;  conditional E-value: 9.6e-11
                 S--EEE--SS---E-S-HHH-TT--EEE-.-S-----GGGGX CS
       LRR_4   2 nLevLdLsnNqltdiplleklpnLkeLdLsgNnlitdldeLk 43 
                  L++L++++N++t i++l++ +nL+eL++s+N  +++l++L+
  KHJ34406.1 239 CLKILSIQSNRITNISGLSQQKNLEELYISHN-ALKNLTGLE 279
                 69***************************999.999999987 PP

  == domain 7  score: 25.2 bits;  conditional E-value: 5.2e-09
                 S--EEE--SS---E-S-HHH-TT--EEE-.-S-----GGGG CS
       LRR_4   2 nLevLdLsnNqltdiplleklpnLkeLdLsgNnlitdldeL 42 
                 +L++L +snN+++++++l+ l +L+eL+ s N     ld++
  KHJ34406.1 283 SLRILEISNNKVSSLQGLQHLSHLQELWASYN----ELDSF 319
                 7****************************999....55444 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.0    0.0056        17      15      49 ..      95     127 ..      85     129 .. 0.73
   2 !   27.7   4.2   5.7e-10   1.7e-06       3      61 .]     107     162 ..     105     162 .. 0.95
   3 !   16.9   1.6   1.4e-06    0.0041      24      61 .]     171     206 ..     164     206 .. 0.94
   4 !   14.5   0.2   7.3e-06     0.022      22      61 .]     213     250 ..     209     250 .. 0.93
   5 !   28.7   5.1   2.8e-10   8.5e-07       3      60 ..     240     293 ..     238     294 .. 0.96
   6 !   17.6   1.6   7.7e-07    0.0023      23      61 .]     280     316 ..     276     316 .. 0.93

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0056
                 EE-TTSSTT-TT--EEE--SS---GGGGGGGTT-- CS
       LRR_8  15 slddeaFkglsnLkvLdLsnNllttlspgafsgLp 49 
                 s++    ++++ ++ L L++N++t ++   +s+L+
  KHJ34406.1  95 SIKSLRLERFKDVTRLCLRQNSITEIE--GLSCLA 127
                 44444455566899999*********6..777776 PP

  == domain 2  score: 27.7 bits;  conditional E-value: 5.7e-10
                 -SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8   3 LtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 +t+L L+ N++t+++  +    s  ++LdL +Nl++++  + +++L++L+sLdLs N++
  KHJ34406.1 107 VTRLCLRQNSITEIEGLSCL-ASTITELDLYDNLISHI--RHLDDLTNLTSLDLSFNKI 162
                 57899***************.7****************..5****************97 PP

  == domain 3  score: 16.9 bits;  conditional E-value: 1.4e-06
                 -TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8  24 lsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 l++L+ L+  +N++++++   +s L++Lr L L  Nr+
  KHJ34406.1 171 LTSLTDLYFVQNKISHIE--NLSELTKLRNLELAANRI 206
                 899**************6..****************97 PP

  == domain 4  score: 14.5 bits;  conditional E-value: 7.3e-06
                 TT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8  22 kglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 ++l++L++L L+ N++t ++   +  L  L+ L +++Nr+
  KHJ34406.1 213 ETLTGLEELWLGKNKITEID--GLNTLQCLKILSIQSNRI 250
                 5799***************6..****************97 PP

  == domain 5  score: 28.7 bits;  conditional E-value: 2.8e-10
                 -SEEE-TTS--SEE-TTSSTT-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS- CS
       LRR_8   3 LtsLdLsnNrltslddeaFkglsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNr 60 
                 L++L++++Nr+t+++  + +  +nL++L++s+N l+ l    +++++sLr L +s+N+
  KHJ34406.1 240 LKILSIQSNRITNISGLSQQ--KNLEELYISHNALKNLT--GLESCSSLRILEISNNK 293
                 89*************99999..9***************5..****************8 PP

  == domain 6  score: 17.6 bits;  conditional E-value: 7.7e-07
                 T-TT--EEE--SS---GGGGGGGTT--S-.EEE--SS-- CS
       LRR_8  23 glsnLkvLdLsnNllttlspgafsgLpsLrsLdLsgNrL 61 
                 ++s+L++L++snN+ ++l  + +++L++L++L  s+N L
  KHJ34406.1 280 SCSSLRILEISNNKVSSL--QGLQHLSHLQELWASYNEL 316
                 689***************..6*************99987 PP

>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.3   0.00075       2.2      63     116 ..     104     156 ..      80     157 .. 0.85
   2 !   24.0   2.8   7.4e-09   2.2e-05      23     115 ..     132     221 ..     127     223 .. 0.88
   3 !   35.2   2.9   2.7e-12   8.1e-09      24     128 ..     155     253 ..     153     255 .. 0.88
   4 !   29.1   0.7     2e-10     6e-07      50     125 ..     224     294 ..     221     299 .. 0.83
   5 !   15.9   0.4   2.3e-06    0.0068      48     148 ..     266     367 ..     260     371 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00075
       LRR_9  63 lkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkkle 116
                 +k +  l l +n i+ i egl+    +++el l +n + ++ +ld l++l +l+
  KHJ34406.1 104 FKDVTRLCLRQNSITEI-EGLSCLASTITELDLYDNLISHIRHLDDLTNLTSLD 156
                 5566779999*****99.79***************************9999986 PP

  == domain 2  score: 24.0 bits;  conditional E-value: 7.4e-09
       LRR_9  23 eldlrgykipvienlGatldqfdtidlsdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkkl 115
                 eldl  + i+ i  l   l  + ++dls n+i+++ ++  l  l  l++ +n+i +i e+l+e l +l++l l+ n+++++  l+ l+ l++l
  KHJ34406.1 132 ELDLYDNLISHIRHLD-DLTNLTSLDLSFNKIKHIKNISCLTSLTDLYFVQNKISHI-ENLSE-LTKLRNLELAANRIRKIEGLETLTGLEEL 221
                 8888899999999886.57788999******************************99.56766.7899************9999999999887 PP

  == domain 3  score: 35.2 bits;  conditional E-value: 2.7e-12
       LRR_9  24 ldlrgykipvienlGatldqfdtidlsdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklellsllk 122
                 ldl  +ki  i+n+       d + +  n+i +++++  l +l+ l l+ nri++i egl e+l  leel l +n+++e   +d l +l+ l++ls+ +
  KHJ34406.1 155 LDLSFNKIKHIKNISCLTSLTD-LYFVQNKISHIENLSELTKLRNLELAANRIRKI-EGL-ETLTGLEELWLGKNKITE---IDGLNTLQCLKILSIQS 247
                 89999*********87666555.56******************************9.677.57999*********9976...67799999999****99 PP

       LRR_9 123 npvtnk 128
                 n +tn 
  KHJ34406.1 248 NRITNI 253
                 999985 PP

  == domain 4  score: 29.1 bits;  conditional E-value: 2e-10
       LRR_9  50 sdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldPlaslkklellsllknpv 125
                   n+i ++dg+  l+ lk+l++++nri++i+ gl++   nleel +++n l++l+ l+   s ++l++l + +n v
  KHJ34406.1 224 GKNKITEIDGLNTLQCLKILSIQSNRITNIS-GLSQQ-KNLEELYISHNALKNLTGLE---SCSSLRILEISNNKV 294
                 679***************************8.56665.69*************99966...555666666666666 PP

  == domain 5  score: 15.9 bits;  conditional E-value: 2.3e-06
       LRR_9  48 dlsdndirkldgfPllkrlktlllnnnrivriaegleevlPnleelvltnnelqeladldP.laslkklellsllknpvtnk..keyrlyviyklkqlr 143
                  +s n +++l g+     l++l ++nn++  ++ gl + l +l+el  + nel+++ +++  la+ k+l ++ +  np+  k  + yr+ v   l+q+ 
  KHJ34406.1 266 YISHNALKNLTGLESCSSLRILEISNNKVSSLQ-GL-QHLSHLQELWASYNELDSFKEVESvLADKKELVTVYFEGNPLQLKgpTVYRNKVKLALPQIL 362
                 5799************************99874.66.6799******************96489999***********98874468*****99999998 PP

       LRR_9 144 lldfr 148
                  +d  
  KHJ34406.1 363 QIDAS 367
                 77755 PP

>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1     0.052   1.6e+02       3      15 ..     128     140 ..     126     142 .. 0.88
   2 ?   12.7   0.5   3.3e-05     0.099       3      15 ..     150     162 ..     148     163 .. 0.91
   3 ?   -2.1   0.1       1.9   5.5e+03       3      15 ..     172     184 ..     170     185 .. 0.80
   4 ?    0.6   0.0      0.27     8e+02       3      15 ..     194     206 ..     192     208 .. 0.87
   5 ?   -1.6   0.0       1.3   3.9e+03       4      16 ..     217     229 ..     214     229 .. 0.82
   6 ?    6.5   0.2    0.0034        10       3      17 ..     238     252 ..     236     257 .. 0.87
   7 ?    3.9   0.1     0.023        69       4      16 ..     261     273 ..     258     275 .. 0.86
   8 ?    7.0   0.3    0.0023         7       1      16 [.     280     295 ..     280     297 .. 0.90
   9 ?   -2.7   0.2       3.1   9.2e+03       1       8 [.     302     309 ..     300     309 .. 0.70

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.052
       LRR_6   3 thLteLdLsgNdI 15 
                 +++teLdL +N I
  KHJ34406.1 128 STITELDLYDNLI 140
                 799*****99988 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 3.3e-05
       LRR_6   3 thLteLdLsgNdI 15 
                 t+Lt+LdLs+N+I
  KHJ34406.1 150 TNLTSLDLSFNKI 162
                 89**********9 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.9
       LRR_6   3 thLteLdLsgNdI 15 
                 t+Lt L    N+I
  KHJ34406.1 172 TSLTDLYFVQNKI 184
                 7899998888888 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.27
       LRR_6   3 thLteLdLsgNdI 15 
                 t+L+ L+L+ N I
  KHJ34406.1 194 TKLRNLELAANRI 206
                 89*******9998 PP

  == domain 5  score: -1.6 bits;  conditional E-value: 1.3
       LRR_6   4 hLteLdLsgNdIg 16 
                  L+eL L  N+I+
  KHJ34406.1 217 GLEELWLGKNKIT 229
                 5889999999997 PP

  == domain 6  score: 6.5 bits;  conditional E-value: 0.0034
       LRR_6   3 thLteLdLsgNdIgD 17 
                 ++L+ L++++N I++
  KHJ34406.1 238 QCLKILSIQSNRITN 252
                 79***********98 PP

  == domain 7  score: 3.9 bits;  conditional E-value: 0.023
       LRR_6   4 hLteLdLsgNdIg 16 
                 +L+eL +s+N + 
  KHJ34406.1 261 NLEELYISHNALK 273
                 8*********986 PP

  == domain 8  score: 7.0 bits;  conditional E-value: 0.0023
       LRR_6   1 snthLteLdLsgNdIg 16 
                 s+++L+ L++s N+++
  KHJ34406.1 280 SCSSLRILEISNNKVS 295
                 699**********986 PP

  == domain 9  score: -2.7 bits;  conditional E-value: 3.1
       LRR_6   1 snthLteL 8  
                 + +hL+eL
  KHJ34406.1 302 HLSHLQEL 309
                 45788776 PP

>> CRAL_TRIO_2  Divergent CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.2     0.016        49      93     118 ..     171     196 ..     123     214 .. 0.79
   2 ?    7.8   0.0    0.0012       3.5      71     118 ..     259     312 ..     236     328 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.016
  CRAL_TRIO_2  93 vlsafvsskfrkkveyvsrleeLark 118
                  + s+    ++ +k+ ++++l+eL + 
   KHJ34406.1 171 LTSLTDLYFVQNKISHIENLSELTKL 196
                  44444444559************543 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0012
  CRAL_TRIO_2  71 kknlkklyivhpstfvktllktvlsafvsskfrkk......veyvsrleeLark 118
                  +knl +lyi h      t l +++s+   +  ++k      + ++s l+eL+ +
   KHJ34406.1 259 QKNLEELYISHNALKNLTGLESCSSLRILEISNNKvsslqgLQHLSHLQELWAS 312
                  69***********99999997666666666668895666666677777777765 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       1.2   3.5e+03       4      14 ..     109     119 ..     107     127 .. 0.74
   2 ?    0.3   0.1      0.59   1.8e+03       3      14 ..     131     142 ..     129     149 .. 0.74
   3 ?    7.2   0.5    0.0033       9.8       1      15 [.     151     165 ..     151     191 .. 0.80
   4 ?   -2.5   0.0       4.9   1.5e+04       1      12 [.     195     206 ..     195     212 .. 0.76
   5 ?    0.1   0.0      0.67     2e+03       2      13 ..     218     229 ..     217     238 .. 0.81
   6 ?    1.1   0.2      0.33   9.9e+02       2      14 ..     240     252 ..     239     258 .. 0.81
   7 ?    6.7   0.3    0.0048        14       1      13 [.     261     276 ..     261     282 .. 0.76
   8 ?    4.4   0.6     0.027        80       1      13 [.     283     295 ..     283     322 .. 0.81
   9 ?   -1.4   0.0       2.2   6.6e+03       2      14 ..     332     343 ..     331     349 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1.2
       LRR_1   4 hLdLsnnpllg 14 
                 +L L++n+++ 
  KHJ34406.1 109 RLCLRQNSITE 119
                 799****9853 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.59
       LRR_1   3 rhLdLsnnpllg 14 
                 ++LdL +n +++
  KHJ34406.1 131 TELDLYDNLISH 142
                 789999998843 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0033
       LRR_1   1 nLrhLdLsnnpllgl 15 
                 nL++LdLs n + ++
  KHJ34406.1 151 NLTSLDLSFNKIKHI 165
                 8*********98332 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 4.9
       LRR_1   1 nLrhLdLsnnpl 12 
                 +Lr L L  n++
  KHJ34406.1 195 KLRNLELAANRI 206
                 799999977766 PP

  == domain 5  score: 0.1 bits;  conditional E-value: 0.67
       LRR_1   2 LrhLdLsnnpll 13 
                 L++L L+ n ++
  KHJ34406.1 218 LEELWLGKNKIT 229
                 99******9984 PP

  == domain 6  score: 1.1 bits;  conditional E-value: 0.33
       LRR_1   2 LrhLdLsnnpllg 14 
                 L+ L + +n++++
  KHJ34406.1 240 LKILSIQSNRITN 252
                 99*******9854 PP

  == domain 7  score: 6.7 bits;  conditional E-value: 0.0048
       LRR_1   1 nLrhLdLsnnpl...l 13 
                 nL++L++s+n l   +
  KHJ34406.1 261 NLEELYISHNALknlT 276
                 8*********874444 PP

  == domain 8  score: 4.4 bits;  conditional E-value: 0.027
       LRR_1   1 nLrhLdLsnnpll 13 
                 +Lr L +snn  +
  KHJ34406.1 283 SLRILEISNNKVS 295
                 69********952 PP

  == domain 9  score: -1.4 bits;  conditional E-value: 2.2
       LRR_1   2 LrhLdLsnnpllg 14 
                 L + + ++npl +
  KHJ34406.1 332 LVTVYFEGNPL-Q 343
                 5577899***9.4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       504  (0.0281109); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2581.06
//
Query:       KHJ34407.1  [L=357]
Description: hypothetical protein EV44_g4666 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        3.1    6.1   8.9        4.5    5.5   8.9    1.2  1  WDCP      WD repeat and coiled-coil-containing protein family


Domain annotation for each model (and alignments):
>> WDCP  WD repeat and coiled-coil-containing protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   8.9   0.00025       4.5     441     557 ..     175     289 ..     161     321 .. 0.71

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.00025
        WDCP 441 ssesqssasalssllnkaekkklieslskesqkqkrellltastsiqseksgrkLieeiksleqsplssvvdlsekassessvaletldaepvnrsaal 539
                 ss+s+ s++ +ss+ +++ +   + s  k ++ ++r+ ++++  + + ++ +r++ie  +++e++   +++++ ek+++++++++e+ + +++ +s ++
  KHJ34407.1 175 SSQSN-SNNDFSSSRTTTPSLSSSISIEKGFRLRSRSEVINRGRAKSIQEARRRFIEKERVQEEKAAREEIRQLEKRQQKEAIRIERSNRQSS-ASLSC 271
                 22222.2334444445555555666777888999999********************999888888888888899999999*****9966554.55555 PP

        WDCP 540 asasstsdessrpespkv 557
                 +s+ s+sd +s+ +s ++
  KHJ34407.1 272 RSKRSKSDATSHETSESL 289
                 566666666665555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1768  (0.0986112); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 2625.81
//
Query:       KHJ34408.1  [L=516]
Description: putative sh3 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-07   29.4   0.0    8.6e-07   28.5   0.0    1.5  1  SH3_1     SH3 domain
    5.1e-07   29.4   0.1    1.1e-06   28.3   0.1    1.6  1  SH3_9     Variant SH3 domain
    1.7e-05   24.4   0.0    4.6e-05   23.0   0.0    1.8  1  SH3_2     Variant SH3 domain
  ------ inclusion threshold ------
      0.023   14.4   0.0      0.049   13.3   0.0    1.5  1  zf_Hakai  C2H2 Hakai zinc finger domain


Domain annotation for each model (and alignments):
>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0   1.9e-10   8.6e-07       1      47 [.     318     364 ..     318     365 .. 0.98

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 1.9e-10
                 EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEE CS
       SH3_1   1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgtgkeGliP 47 
                 +Al+D+  e+++EL++ +G vi v+ +   gW+ +++  +++ Gl+P
  KHJ34408.1 318 VALFDFISENENELPLIEGQVIWVSYRYGQGWLVAEDPKSRESGLVP 364
                 7********************************************** PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.3   0.1   2.5e-10   1.1e-06       1      48 [.     319     368 ..     319     369 .. 0.95

  Alignments for each domain:
  == domain 1  score: 28.3 bits;  conditional E-value: 2.5e-10
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegsl..tGrtGlvPanyv 48 
                 Al+++   ++ eL+L +G+vi v+ ++  gWl ++   + ++GlvP++yv
  KHJ34408.1 319 ALFDFISENENELPLIEGQVIWVSYRYGQGWLVAEDpkSRESGLVPESYV 368
                 89*********************************66588*********9 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0     1e-08   4.6e-05       2      55 ..     317     369 ..     316     371 .. 0.90

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 1e-08
                 EEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE...CCCEEEEEGCGEE CS
       SH3_2   2 vraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev...gGrvGlfPsslve 55 
                 ++a++d+ +e+++eL + +G+vi v      + + +w+++     +  Gl+P s+v+
  KHJ34408.1 317 AVALFDFISENENELPLIEGQVIWVS----YRYGQGWLVAEdpkSRESGLVPESYVR 369
                 589**********************7....999999999996655777********8 PP

>> zf_Hakai  C2H2 Hakai zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.1e-05     0.049       1      24 [.     207     230 ..     207     231 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.1e-05
    zf_Hakai   1 GtvFmCtvvegCrRTYLSqRDLqA 24 
                 Gt ++ + +++C+R Y Sq D qA
  KHJ34408.1 207 GTFYISSSENDCKRFYVSQDDDQA 230
                 89999999***********99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (516 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       494  (0.0275531); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3686.48
//
Query:       KHJ34409.1  [L=908]
Description: putative px domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.7e-123  410.9   4.6     7e-123  410.0   4.6    1.5  1  DUF3818   Domain of unknown function in PX-proteins (DUF3818)
    3.1e-39  133.9   1.1    6.6e-39  132.9   1.1    1.6  1  PXB       PX-associated
    1.4e-08   34.7   4.3    2.9e-08   33.7   0.3    3.4  3  PX        PX domain
     0.0059   16.6   1.0      0.046   13.7   0.0    2.9  3  AAA_14    AAA domain


Domain annotation for each model (and alignments):
>> DUF3818  Domain of unknown function in PX-proteins (DUF3818)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  410.0   4.6  1.6e-126    7e-123       1     339 []     421     755 ..     421     755 .. 0.98

  Alignments for each domain:
  == domain 1  score: 410.0 bits;  conditional E-value: 1.6e-126
     DUF3818   1 gLsklfeeikekesieelspelkkliewarielAstlyqvFvgsdnsselfaqlkrlhklmPYfllkqiLritNpmaimkglldLfLaqPfggrsLlqr 99 
                 gLskl++e+k+k+si++ls +++k++ew+rie+A+t+y++F+++dns+elfaq+k++h+++PY+++k+++r++Np+a+m+++ld+fLa+Pfg rsL+qr
  KHJ34409.1 421 GLSKLLQEVKDKPSIQDLSFQYRKFAEWLRIEVAATIYHLFLAEDNSPELFAQAKKIHSMIPYTIVKNAIRFANPAAVMSSILDIFLAKPFGTRSLMQR 519
                 89************************************************************************************************* PP

     DUF3818 100 ifstilnedlkelekeikelekkidkseelieklkkfveaseeeqeeireeseeekldllvvilrseel.pklskeqleeviesykaykeakkeeksas 197
                 if+ +ln+++++l+k+i++++++i+ + ++ ek+kkf++++e+++  ir+ese+ ++dl+++ilrse + p+l+++q+ +++++y a+++a+++     
  KHJ34409.1 520 IFALTLNDGIRSLQKNINTINDEIG-EFTFSEKIKKFCNSDESVRIVIRQESENDNVDLILAILRSELIpPRLNPTQIGKIFNAYLAWNSAVSN----I 613
                 *************************.**************************************************************999777....8 PP

     DUF3818 198 ekeenedaelfedlkellklylrerDkellikllqepelsellkdiitifyeplvrvykaanisdalkdfqkFlndliklveklkneeqesdpanvvqa 296
                 ++e +++a  f++lk+llkly+r+rDk ++ ++++ep++++l++d++tifyeplvrvyk an++++++d++ F++d+i+++++ ++++ ++dp+++vqa
  KHJ34409.1 614 DEEVKSGALHFSYLKQLLKLYTRQRDKAMMLSMIEEPVTLQLFRDLFTIFYEPLVRVYKTANVYNRVTDLADFIDDMITVIDRAREQDFSADPNQTVQA 712
                 899999999*************************************************************************77777766********* PP

     DUF3818 297 fidLvdrhedsfykFvhevyvkdeelfdelikWiekilkflre 339
                 fidL++rhed++y F+he++++d++lf +li+Wie+i++flr+
  KHJ34409.1 713 FIDLCARHEDNLYGFIHEIHTHDDGLFTQLIDWIESIIDFLRN 755
                 *****************************************95 PP

>> PXB  PX-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.9   1.1   1.5e-42   6.6e-39       2     129 ..      10     134 ..       9     135 .. 0.93

  Alignments for each domain:
  == domain 1  score: 132.9 bits;  conditional E-value: 1.5e-42
         PXB   2 sseLtplqehyLkkiLihlelykElealkdpdalsklGyPFkseekekkekkeaesselPllrfllrefvltfPfl.kalpkefWqdkvqpfleslaea 99 
                 s+ Lt  qehyLk++Li++++++E+++l+ p+al+++G+PFkse  e     +  +s+lP+lr+++ +fv +fPfl +a +kefWqdk+q+fl+s+a++
  KHJ34409.1  10 SEILTGRQEHYLKRELISQQVKAEITELNCPTALQRFGAPFKSEFGE----VSPLDSDLPILRYIFVHFVRKFPFLdHAREKEFWQDKLQVFLQSFASK 104
                 5789**************************************96522....335678*******************88999****************** PP

         PXB 100 nlSesydkgeltkrkklatklskllellvr 129
                 ++S+s+d+ e tkr+kl+ k++kl+el++ 
  KHJ34409.1 105 HISSSEDRLEETKRRKLSIKCQKLVELMMV 134
                 ***************************986 PP

>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.4   6.2e+03      84      97 ..      91     104 ..      60     120 .. 0.63
   2 !   33.7   0.3   6.5e-12   2.9e-08       9     112 ..     187     364 ..     180     365 .. 0.91
   3 ?   -1.5   0.1      0.52   2.3e+03      76      97 ..     394     415 ..     377     428 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHTS CS
          PX  84 rkgLeeyLqrllnh 97 
                 + +L+++Lq+ ++ 
  KHJ34409.1  91 QDKLQVFLQSFASK 104
                 44577777766554 PP

  == domain 2  score: 33.7 bits;  conditional E-value: 6.5e-12
                 EEEEEE.TTSSEEEEEEEEEETTSSSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSS.................................. CS
          PX   9 lerets.gskkhsyylyevelktgakewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsv.................................. 72 
                 ++ +++   +kh+ ++ +v++k +  e  + +rY dF +L++++  + p+ +iP+lP+k+  +s+                                  
  KHJ34409.1 187 VNGRRKlIHHKHTEFILRVKRKGE-PEYFIGKRYGDFDHLYKNIILQLPGKVIPSLPRKNKSKSStsaivsnllkgraeneassissvstesfpsnslk 284
                 55555667899***********86.***********************************99988********************************** PP

                 ........................................CTTSHHHHHHHHHHHHHHHHHHHTSCHHHHSHHHHHHHHS CS
          PX  73 ........................................rkkdeefiekrrkgLeeyLqrllnhpelrnsevlteFLev 112
                                                         +k      e +r ++ ++L+ ll++ ++ +s+++ +FL++
  KHJ34409.1 285 dhrwmtvtssksslsprssieerlcsrsslntsrgtkitdDKPFYFCREDQRISMRAFLRTLLSNDQIASSNAMNDFLTS 364
                 ************************************88753333334578999*************************85 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 0.52
                 SHHHHHHHHHHHHHHHHHHHTS CS
          PX  76 deefiekrrkgLeeyLqrllnh 97 
                   e+++kr  +L++y+++  ++
  KHJ34409.1 394 FYEIARKRAIELDVYMEEFRRN 415
                 4578999999*****9987666 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       2.4   1.1e+04      68      96 ..     538     565 ..     516     567 .. 0.65
   2 ?   -0.3   0.0      0.23     1e+03      31      83 ..     689     746 ..     669     762 .. 0.64
   3 !   13.7   0.0     1e-05     0.046      52     129 ..     764     840 ..     750     842 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2.4
      AAA_14  68 lflDEiqevpewekalkslvdegknldvi 96 
                  + DEi e  ++++ +k+++++++ ++++
  KHJ34409.1 538 TINDEIGEF-TFSEKIKKFCNSDESVRIV 565
                 455777766.4677778888877777776 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.23
      AAA_14  31 esilyinldderdkkladpekllelilek.lkeekktylflDEiqev.....pewekal 83 
                 + i  i+  +e+d + adp++  +++ ++ +++e++ y f+ Ei+       +++ +++
  KHJ34409.1 689 DMITVIDRAREQDFS-ADPNQTVQAFIDLcARHEDNLYGFIHEIHTHddglfTQLIDWI 746
                 455566666666653.45767788888874444789999****9988555553444444 PP

  == domain 3  score: 13.7 bits;  conditional E-value: 1e-05
      AAA_14  52 llelileklke.ekktylflDEiqevpewekalkslvdegknldvivtGSnskllskeiatslagrvaeielyplsfaE 129
                 +++l+ e++++ + ++ + +DEi ++  w++a k+ ++++++ ++ + GS+s +   ++  s + r +++ l+ ++++E
  KHJ34409.1 764 MNSLFTESISSgRLNKDVAIDEIDKLIAWQEARKKWHQDKTRQKMAADGSSSIIN--KVPGSGTFRSSDFGLHQMDLEE 840
                 4556666644433344499*********************999********9887..4555566666666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (908 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       657  (0.0366445); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.70u 0.30s 00:00:01.00 Elapsed: 00:00:00.45
# Mc/sec: 6097.00
//
Query:       KHJ34410.1  [L=1154]
Description: putative dna repair transcription protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.1e-35  120.5   5.9    4.5e-34  118.2   0.8    3.1  3  MMS19_N   Dos2-interacting transcription regulator of RNA-Pol
  ------ inclusion threshold ------
      0.037   14.7   0.3       0.15   12.7   0.1    2.2  2  SlyX      SlyX
      0.055   13.1   0.0       0.13   12.0   0.0    1.5  1  Auxin_BP  Auxin binding protein


Domain annotation for each model (and alignments):
>> MMS19_N  Dos2-interacting transcription regulator of RNA-Pol-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.2   0.8   7.6e-38   4.5e-34      17     259 ..      70     326 ..      54     328 .. 0.88
   2 ?   -2.6   0.1      0.56   3.3e+03     209     248 ..     439     477 ..     434     487 .. 0.68
   3 !    3.4   0.0     0.008        48      95     153 ..     850     912 ..     827     931 .. 0.82

  Alignments for each domain:
  == domain 1  score: 118.2 bits;  conditional E-value: 7.6e-38
     MMS19_N  17 akavslLaevlsrlpkkklseeevevLvqFflsrledfav.......lkealkgllaLlrlkkfsaeeavevlralf....eevhvqslaqadRklvye 104
                 ++a++lL +v +r++   ++e++++ Lv+++++r+++++        ++e++  +++L++ ++f++e+a ++++++f    +  ++  l+  +R+ +y 
  KHJ34410.1  70 SRALTLLLAVCERIK--IIQENDLHYLVDYLAERIRNETNssynnagIREVILLFRTLSKINSFNPEDACSIISSIFtladSRHRFMDLPDVVRQDIYA 166
                 799999****99998..59****************96555234444466666666777799****************77644444889*********** PP

     MMS19_N 105 lldallekhreal.kelge.dflegfvelvdgEkDPrnLllvfellkvllrefdls.alaeelFdvvscYFPitFrpppndpygitredLkaaLrecla 200
                 +++++l++++  l ++lg+ ++++g++el++ Ek   +Ll+vf l+ +++r+++l+ + +e+lF ++  YFPi+ +  +nd+++ +  ++++ L +cl+
  KHJ34410.1 167 VVENFLKEYSHVLiQSLGTsKIVDGILELATFEKKAPCLLIVFPLISHISRSWNLGdSDLEKLFKSFIRYFPIKISGLQNDSMRLSM-EMSDCLTDCLV 264
                 *********99999*****889********************************99899*************************965.69********* PP

     MMS19_N 201 asplfaplalplllekLds.tsvs..akldaLqtlaacveaygaeavaehlralwsalkkei 259
                 +++ +a +++++++ +Ld  +s s  + +++  ++ +cv++y++e+va ++  lw++lk  i
  KHJ34410.1 265 SNDFYASHTFSNFIASLDDhSSISatVMHEICVAISYCVKKYSKEKVALWSIRLWNSLKLII 326
                 *****************99544445599******************************9766 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.56
     MMS19_N 209 alplllekLdstsvsakldaLqtlaacveaygaeavaehl 248
                 +l +l+e Ld +  +   d+ ++++a +++++++ ++  +
  KHJ34410.1 439 ILKALIELLDNKEITNDIDTVEAIKA-ISTFQERLIETLS 477
                 56778888888888888888888876.4566655555444 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.008
     MMS19_N  95 aqadRklvyelldallekhrealkelge.....dflegfvelvdgEkDPrnLllvfellkvllr 153
                   ++R ++++ ++ l++k+r +++el++      f+e +v+  ++E  P+ ++ +++++  + +
  KHJ34410.1 850 IPRVRVALLHYIQILVAKFRCSIDELQDggnllYFIESLVKK-SHENSPQYVMQLYQVIVYIAA 912
                 46789**************99999898887666667777764.79*********9999887764 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1   2.5e-05      0.15      13      37 ..     467     491 ..     457     497 .. 0.89
   2 ?   -3.8   0.0         3   1.8e+04      18      29 ..     529     540 ..     526     543 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.5e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
        SlyX  13 afqedtieeLndvvaeqqqqidrlq 37 
                 +fqe++ie+L+++v+e  q i++l 
  KHJ34410.1 467 TFQERLIETLSNAVVELKQIIQELS 491
                 8********************9996 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 3
                 HHHHHHHHHHHH CS
        SlyX  18 tieeLndvvaeq 29 
                  +++Ln+++++ 
  KHJ34410.1 529 IVQDLNKILVKS 540
                 6899***99986 PP

>> Auxin_BP  Auxin binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.1e-05      0.13      12     113 ..     678     779 ..     671     802 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.1e-05
                 EEEGGGS--B-TT-TTEEEEEEE-HHHH--SSEEEEEEEE-TT-B--EEEESS-EEEEEEE--EEEEE--SSSSS--S-EEEEE-TTEEEEE-TT--EE CS
    Auxin_BP  12 vrniselpqdnygreglshitvagsvlhgmkevevwlqtlapgsrtpihrhsceevfvvlkgkgtlylasssskypgkpqelpifanstlsipvndahq 110
                 v+ is+l    y    +  i  + s++   k +    + +   ++ p +  s + +f  l gk  l+++ s+++ p + + ++++++s ++  ++da q
  KHJ34410.1 678 VKTISNLVILPYESIWIQIIRKSLSLNMKNKSISKTEKRFLSIRELPNKDDSLDALFLYLVGKIILLVSRSKLNTPINNIVFRFYNQSLIEENMKDANQ 776
                 666666666666655555555555566666666666777888889999999************************************************ PP

                 EE- CS
    Auxin_BP 111 vkn 113
                 v +
  KHJ34410.1 777 VEE 779
                 976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1154 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       687  (0.0383178); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.75u 0.28s 00:00:01.03 Elapsed: 00:00:00.44
# Mc/sec: 7860.91
//
Query:       KHJ34411.1  [L=261]
Description: putative ribosomal large subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-47  161.7   0.3    1.8e-47  161.0   0.3    1.4  1  Ribosomal_S8e  Ribosomal protein S8e


Domain annotation for each model (and alignments):
>> Ribosomal_S8e  Ribosomal protein S8e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.0   0.3   9.8e-52   1.8e-47       3     137 .]      32     260 ..       7     260 .. 0.96

  Alignments for each domain:
  == domain 1  score: 161.0 bits;  conditional E-value: 9.8e-52
                    XBXXCCCSEESSTEEXXXSSXXX..................................................CCSBXXXXXXXEE.......... CS
  Ribosomal_S8e   3 isrdskhkrkltGgkakllrkkr..................................................kielgrkekatkl.......... 38 
                     ++ s++++kltG++akl+++kr                                                  +i+++r+eka+k+          
     KHJ34411.1  32 GHKASEDAQKLTGLRAKLYQRKRhlekiqmkkqikaheernvkssapnepsstplpqylldrsnptsakalssAIKNKRAEKAAKFsvplpkvrgi 127
                    6999**********************************************************************************9999999977 PP

                    .SSHEEEEEEETTCEEEE...............................EEESESEEEEEETTTTEEEEEEEEEEECSSSTCHHHHTTC--TTEEE CS
  Ribosomal_S8e  39 .gaervkvvrvrgGkrkk...............................ralrlkkanvthpeekvtkklkIlgVkknpsnneyvrlgvltKgaii 102
                     ++e++kvv  ++Gk+                                 ++lr+kkanvthpe++vt++l+I++Vkknp+n++y++lgvltKg+ii
     KHJ34411.1 128 aEEEMFKVV--KTGKKTAkkswkrmvtkptfvgpdftrrpvkyerfirpMGLRYKKANVTHPELGVTVQLPIISVKKNPQNQMYTQLGVLTKGTII 221
                    55*******..666554456**************************************************************************** PP

                    EEESHHHHHHHHTTEEE....EEEESEHHHHSSEEEEEE CS
  Ribosomal_S8e 103 evdvseLgevtqsgkvv....AqvtsrPgqdGcvnavlL 137
                    ev+vseLg+vt++gkvv    Aq+t+++++dGc+n vlL
     KHJ34411.1 222 EVNVSELGLVTAGGKVVwgrwAQITNNCENDGCINSVLL 260
                    *************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1298  (0.0723967); expected 358.6 (0.02)
Passed bias filter:                      661  (0.0368676); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 1764.02
//
Query:       KHJ34412.1  [L=515]
Description: putative universal stress protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-15   56.6   0.0    8.6e-15   55.5   0.0    1.6  1  Usp       Universal stress protein family


Domain annotation for each model (and alignments):
>> Usp  Universal stress protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.0   4.8e-19   8.6e-15       3     141 .]     116     255 ..     114     255 .. 0.92

  Alignments for each domain:
  == domain 1  score: 55.5 bits;  conditional E-value: 4.8e-19
                 SEEEEEE-SSHHHHHHHHHHHHHHHHCTSEEEEEEEEESSHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEESSHHHHHHHHHHH CS
         Usp   3 krIlVavDgseeskkAlewAlelakargaelillhvidprasgavsdadeeaeeeeleleeaeleadaakaaaeaggvkvevvveegdpaeeilevaee 101
                 ++ +V+v ++e+s+ Al+w le++ ++g+e+i++hvid +++  ++  +e+ e++ +++e+ ++ +    +  + + +  +++ + g+   +  ++ + 
  KHJ34412.1 116 RTFMVGVGENEYSDIALQWMLEELVDDGDEIICVHVIDKDSKVVSDRNMEKREYQTEAKELLQRIQV---RNDDNRAIGIVLEFVAGKLHATFQRMIQL 211
                 789***********************************99998888888888888888888777765...799999999******************** PP

                 TTSSEEEEESCC..SSTTTTCS..SBHHHHHHHHHTSSEEEEEE CS
         Usp 102 edadliVvGsrg..rsglsrll..lGSvseyvlrhapcpVlvVr 141
                 +++ +++vG++g  ++gl++l+    S+s+ +l+ +p+pV+vVr
  KHJ34412.1 212 YEPAMLIVGTKGrsLGGLQGLMsnRNSFSKWCLQYSPIPVVVVR 255
                 ************888899998899*******************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       983  (0.0548274); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 3490.77
//
Query:       KHJ34413.1  [L=578]
Description: hypothetical protein EV44_g3184 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.2e-06   28.3   3.9      2e-06   27.6   3.9    1.3  1  zf-CCHC    Zinc knuckle
    0.00011   21.8   3.8    0.00022   20.9   3.8    1.4  1  zf-CCHC_5  GAG-polyprotein viral zinc-finger
    0.00014   21.7   4.1    0.00032   20.6   4.1    1.6  1  zf-CCHC_3  Zinc knuckle
  ------ inclusion threshold ------
      0.079   13.5   0.7      0.079   13.5   0.7    2.6  3  HSCB_C     HSCB C-terminal oligomerisation domain
       0.17   11.8   0.1       0.17   11.8   0.1    1.7  2  CLIP1_ZNF  CLIP1 zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   3.9   5.5e-10     2e-06       2      18 .]     463     479 ..     462     479 .. 0.92

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 5.5e-10
                 CTSSSSSSSSTTTTSTS CS
     zf-CCHC   2 kCynCGepGHiardCpk 18 
                 +C++CG+ GH+a+dC++
  KHJ34413.1 463 QCFKCGKYGHWANDCKS 479
                 8**************85 PP

>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   3.8     6e-08   0.00022       3      20 ..     462     479 ..     460     485 .. 0.88

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 6e-08
                 -B-TTT-SSBS-TTT--- CS
   zf-CCHC_5   3 glCpRCkkgkHwardChs 20 
                 + C +C+k  Hwa+dC+s
  KHJ34413.1 462 NQCFKCGKYGHWANDCKS 479
                 78***************9 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   4.1     9e-08   0.00032       3      32 ..     460     489 ..     458     496 .. 0.86

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 9e-08
   zf-CCHC_3   3 asaaCQkClkkGHwtYECknagerkytkRp 32 
                  + +C kC+k+GHw+  Ck   ++ y  Rp
  KHJ34413.1 460 SRNQCFKCGKYGHWANDCKSSHKQQYSNRP 489
                 6789***************97778899888 PP

>> HSCB_C  HSCB C-terminal oligomerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.7   2.2e-05     0.079      15      62 ..      19      67 ..       6      71 .. 0.74
   2 ?   -2.6   0.0       2.3   8.4e+03      26      50 ..     427     451 ..     415     457 .. 0.74
   3 ?   -2.1   0.4       1.6   5.8e+03      24      37 ..     561     574 ..     549     578 .] 0.50

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.2e-05
                HHHCGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT..-HHHHHHHH CS
      HSCB_C 15 eleeaeeaadkeeleelkaeveerieeleaeleeafekk..dleaaadll 62
                +le a  ++  +++++l++ ++er e++e+++ee f+k   +++++  ++
  KHJ34413.1 19 RLEGAD-KETNSRIAKLEKSINERFEKTEKKIEEGFNKVdyRFDKIMTAI 67
                456663.334499999******************9944456666766665 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.3
                 HHHHHHHHHHHHHHHHHHHHHHHHH CS
      HSCB_C  26 eeleelkaeveerieeleaeleeaf 50 
                 ++++el++ ++   +++ + +++a+
  KHJ34413.1 427 TQIDELHNTNTDIFATSHDTIDTAL 451
                 5778888888887777777777776 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.6
                 SHHHHHHHHHHHHH CS
      HSCB_C  24 dkeeleelkaevee 37 
                  ++ele + +e  e
  KHJ34413.1 561 VESELETFLQECLE 574
                 22555555554433 PP

>> CLIP1_ZNF  CLIP1 zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.4       2.1   7.6e+03      12      16 ..     444     448 ..     444     448 .. 0.92
   2 ?   11.8   0.1   4.8e-05      0.17       7      17 .]     467     477 ..     466     477 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 2.1
   CLIP1_ZNF  12 HdTed 16 
                 HdT+d
  KHJ34413.1 444 HDTID 448
                 ***98 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 4.8e-05
   CLIP1_ZNF   7 CEvFGHdTedC 17 
                 C+ +GH+++dC
  KHJ34413.1 467 CGKYGHWANDC 477
                 *********** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (578 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1212  (0.0676); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4244.51
//
Query:       KHJ34414.1  [L=583]
Description: putative transcriptional regulator cwf13 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-71  239.6   4.5    1.2e-71  239.6   4.5    2.2  2  SKIP_SNW    SKIP/SNW domain
     0.0011   18.7  21.5     0.0027   17.5  21.5    1.6  1  Cwf_Cwc_15  Cwf15/Cwc15 cell cycle control protein
  ------ inclusion threshold ------
      0.026   14.4  21.8       0.07   13.0  21.8    1.8  1  MFAP1       Microfibril-associated/Pre-mRNA processing
        3.1    7.8   8.2        8.4    6.3   8.2    1.8  1  FAM60A      Protein Family FAM60A


Domain annotation for each model (and alignments):
>> SKIP_SNW  SKIP/SNW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.6   4.5   2.6e-75   1.2e-71       1     160 []     194     352 ..     194     352 .. 0.98
   2 ?   -5.0   5.9         4   1.8e+04     122     151 ..     389     418 ..     361     428 .. 0.61

  Alignments for each domain:
  == domain 1  score: 239.6 bits;  conditional E-value: 2.6e-75
    SKIP_SNW   1 eyikytpsqaeekknseakqriikivekqeDPleppkfkhkkvpagpesppvpvlhspprkltkeeqekwkIPpaiSnwkNpkGytipLdkRlaadgrg 99 
                 ++++y p+++ + +ns++k+ri+kive+q+DPl ppkfkhkk+p+gp+spp+pv+hspprklt+e+qe+wkIPp +SnwkNpkGyt+pLdkRlaadgrg
  KHJ34414.1 194 TFVRYSPANQMG-DNSKKKDRILKIVERQQDPLAPPKFKHKKIPRGPPSPPPPVMHSPPRKLTAEDQEAWKIPPPVSNWKNPKGYTVPLDKRLAADGRG 291
                 589*****5555.8************************************************************************************* PP

    SKIP_SNW 100 lqeveindkFaklseaLeeAerkareevklraelkkklaekekeekeeklrelaekareer 160
                 lq+v+indkFa+++eaL +A+r+areevk+ra ++++laekek +kee+lr la+kareer
  KHJ34414.1 292 LQDVTINDKFAQFAEALFTADRHAREEVKQRALMQQRLAEKEKAQKEEHLRILAQKAREER 352
                 ***********************************************************98 PP

  == domain 2  score: -5.0 bits;  conditional E-value: 4
    SKIP_SNW 122 kareevklraelkkklaekekeekeeklre 151
                 ++re+ ++rae +++ + k ++++    r+
  KHJ34414.1 389 EIRERERARAERRREEERKLRQSRMGAERR 418
                 344444445554444444444444444444 PP

>> Cwf_Cwc_15  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5  21.5     6e-07    0.0027      55     180 ..     305     420 ..     289     452 .. 0.57

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 6e-07
                 HHHHHHHHHHHHHHHH-------------------------------------..-------------------------------------------- CS
  Cwf_Cwc_15  55 raeLeeaeaeakakkrkkaeleaeeeeekekkeeeeeeeeeeakrrkeelleeareidaddedseeeeeeeeeesdddsdsdsdddddedetaeLlrEL 153
                  + L +a+++a+++ +++a +++        +e+e++++ee+ +   +++ ee++ i+a +++++++++++e+ sd+ds+ ++ddddd+de    +rE 
  KHJ34414.1 305 AEALFTADRHAREEVKQRALMQQR------LAEKEKAQKEEHLRILAQKAREERAGINAGSRSERKSRSQSERYSDSDSSGSNDDDDDNDE----IRER 393
                 445555555555554443222222......2222222222222222223445556888888887665555444433333333333333333....79** PP

                 --------------------------- CS
  Cwf_Cwc_15 154 ekikreraeekerkerekaeeeekere 180
                 e+ ++er  e+erk r+++  +e++ +
  KHJ34414.1 394 ERARAERRREEERKLRQSRMGAERRVQ 420
                 ************999997665554433 PP

>> MFAP1  Microfibril-associated/Pre-mRNA processing
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0  21.8   1.6e-05      0.07      21     143 ..     315     437 ..     300     508 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.6e-05
                 XXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXS-SSSSHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       MFAP1  21 kRetiae....keaeeeeeeeeeeeekkeeeerkkeakklveeeirkeaeakeaedeeeeeaedvddtDeldpeaeyeaWklReLkRikrdreereere 115
                  Re++++    +++ +e+e++++ee+ +  +++ +e ++ +++  r e +++++++      +d d++   d++ + ++ + Re +R +r ree+++ +
  KHJ34414.1 315 AREEVKQralmQQRLAEKEKAQKEEHLRILAQKAREERAGINAGSRSERKSRSQSERY----SDSDSSGSNDDDDDNDEIRERERARAERRREEERKLR 409
                 3444444223333333333333333333344444444445555555444444444333....33333334445555666678***************** PP

                 HHHHHHHHHHHS-HHHHHHHHHHHHHHH CS
       MFAP1 116 kekeelerrrnlteeereaedrellkkq 143
                 + +   err ++ ++er+++  e+++  
  KHJ34414.1 410 QSRMGAERRVQMMARERNRDISEKVALG 437
                 ******************9887776654 PP

>> FAM60A  Protein Family FAM60A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   8.2    0.0019       8.4      80     167 ..     314     404 ..     308     458 .. 0.47

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0019
      FAM60A  80 ragpglkslaklkkkekkesskkieekfekklkkkkklkktkakasdasssereaspassd...sasedsdesedeeek........krkkllekkkkr 167
                 +a   +k+ a ++++  ++++ ++ee+ +  ++k +++++  ++ s +++++r++s   sd   s s+d+d+++de ++        +        +++
  KHJ34414.1 314 HAREEVKQRALMQQRLAEKEKAQKEEHLRILAQKAREERAGINAGSRSERKSRSQSERYSDsdsSGSNDDDDDNDEIREreraraerR--------REE 404
                 4555555555555552222223333333333333333333333333334444444444433111222222222222222222222210........111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (583 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1402  (0.0781973); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 4100.31
//
Query:       KHJ34415.1  [L=385]
Description: putative cell division control protein 12 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.3e-113  378.1   0.1   3.5e-113  377.6   0.1    1.2  1  Septin           Septin
    1.4e-07   31.5   0.0    2.9e-07   30.6   0.0    1.5  1  MMR_HSR1         50S ribosome-binding GTPase
    2.7e-06   27.1   0.8    0.00011   21.8   0.1    2.5  2  GTP_EFTU         Elongation factor Tu GTP binding domain
    3.2e-06   27.2   0.0    5.2e-05   23.2   0.0    2.5  2  RsgA_GTPase      RsgA GTPase
     0.0021   18.4   0.4     0.0066   16.7   0.0    2.0  2  AAA_22           AAA domain
     0.0029   17.1   0.1     0.0052   16.3   0.1    1.3  1  Pox_A32          Poxvirus A32 protein
     0.0037   17.5   0.1     0.0076   16.5   0.1    1.5  1  Roc              Ras of Complex, Roc, domain of DAPkinase
      0.006   15.9   0.0       0.01   15.2   0.0    1.4  1  AIG1             AIG1 family
     0.0065   16.2   6.8      0.016   14.9   6.8    1.6  1  Casc1_N          Cancer susceptibility candidate 1 N-terminus
     0.0078   15.3   0.0      0.014   14.5   0.0    1.4  1  IIGP             Interferon-inducible GTPase (IIGP)
  ------ inclusion threshold ------
      0.015   15.0   0.0      0.026   14.2   0.0    1.5  1  AAA_24           AAA domain
      0.023   14.0   0.0      0.045   13.0   0.0    1.8  1  KAP_NTPase       KAP family P-loop domain
      0.029   14.0   0.4      0.086   12.4   0.3    1.8  1  Ras              Ras family
      0.032   14.6   0.1       0.12   12.7   0.0    2.0  2  AAA_16           AAA ATPase domain
      0.034   13.2   0.3       0.12   11.4   0.1    1.9  2  T2SSE            Type II/IV secretion system protein
      0.043   14.5   0.9       0.13   12.9   0.9    1.8  1  FOXP-CC          FOXP coiled-coil domain
       0.06   13.3   0.0        0.1   12.5   0.0    1.3  1  NACHT            NACHT domain
      0.097   12.4   0.0       0.18   11.5   0.0    1.4  1  Sigma54_activat  Sigma-54 interaction domain
      0.099   13.2   0.1       0.28   11.7   0.0    1.8  2  ABC_tran         ABC transporter
        0.1   12.0   0.0       0.21   10.9   0.0    1.5  1  FtsK_SpoIIIE     FtsK/SpoIIIE family
        0.1   13.2   5.9       0.17   12.5   5.9    1.6  1  Adaptin_binding  Alpha and gamma adaptin binding protein p34
       0.17   11.7   0.3        5.3    6.8   0.3    2.5  1  PduV-EutP        Ethanolamine utilisation - propanediol utili
       0.22   11.6   5.3        4.6    7.3   0.0    3.1  3  Dynamin_N        Dynamin family
        1.3    8.5   9.9       0.52    9.8   5.1    2.5  3  DegS             Sensor protein DegS


Domain annotation for each model (and alignments):
>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  377.6   0.1  4.6e-116  3.5e-113       1     276 [.      28     303 ..      28     308 .. 0.96

  Alignments for each domain:
  == domain 1  score: 377.6 bits;  conditional E-value: 4.6e-116
                 XEEEEEEEEEEBTTSSCCCCCCTTSSSS------------.------S-EEEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHHHHHHHHHH CS
      Septin   1 kgieftlmvvGesglGkttlintlfetdlieeekleease.kkkktveikkkkvvieedgvklnltviDtpgfGdavdnskswepiveyideqfeeylr 98 
                 +g  ft+mv+GesglGktt+intlf+t++++   +++++  +  ktvei+ +k+++ee+ +k++ltviDtpgfGd v+n++sw pi+e++d+q+e+y+ 
  KHJ34415.1  28 RGAAFTIMVAGESGLGKTTFINTLFSTTIKNYADHKRRHAkQVDKTVEIEITKAELEEKFFKVRLTVIDTPGFGDYVNNRDSWMPIIEFLDDQHESYML 126
                 6899**************************998777776648899****************************************************** PP

                 HCTSS--SS-----EEEEEEEE-TTSSSS-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT--------SSSS-SCCHHHHHHH CS
      Septin  99 eesklkRkkivDkRvHaclyfisPtghglkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeikiyklpdeeededeeakelsek 197
                 +e++ +R  ++D RvHaclyfi+Ptgh lkpld+e+mk+ls++vnliPviaKaDtl   +   fK++ir+ +e++ ikiy+ p++eed+ e+a++++++
  KHJ34415.1 127 QEQQPRRVDKIDLRVHACLYFIRPTGHTLKPLDIEVMKRLSSRVNLIPVIAKADTLSPADFALFKQRIRAVIEAQGIKIYT-PPIEEDD-EAAAQHARS 223
                 *********************************************************************************.8888887.56699**** PP

                 HHHC-SEEB-SSSSEEEE.SSSEEEEEEETTEEEETT-TTT-SCCHHHHHHHHHCHHHHHHHHHHTHHHHHHHHHH-XXX CS
      Septin 198 lkeslPfaivgsneliek.kgkkvrgRkypWGvvevenekhsdFlkLrklllkthledLkevteellYetyRseklsklk 276
                 l +++Pfa++gs++ +++ +g+ v+gR+y+WGv evene+h+dF+kLr++l++th+ dL+++tee +Ye yR+++++++k
  KHJ34415.1 224 LMAAMPFAVIGSEKDVKTgDGRIVKGRQYSWGVAEVENEDHCDFKKLRSILIRTHMLDLIHTTEESHYEAYRATQMETRK 303
                 ****************************************************************************9987 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0   3.9e-10   2.9e-07       2     101 ..      34     166 ..      33     178 .. 0.60

  Alignments for each domain:
  == domain 1  score: 30.6 bits;  conditional E-value: 3.9e-10
                 EEEEESTTSSHHHHHHHHHT........STEEESSSTTSSSSEEEEEEE....ETTEEEEEEECGGC.............SS...HHHHHHHHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltg........ekaivsdkpgtTrdinegrvk....lkgkeielvDtpGl.............ie...gaseekglgkafla 72 
                 ++++G +  GK+t+in+l+          k + +++  +T +i+  + +    + + +++++DtpG+             ie   +++e+ +l+++  +
  KHJ34415.1  34 IMVAGESGLGKTTFINTLFSttiknyadHKRRHAKQVDKTVEIEITKAEleekFFKVRLTVIDTPGFgdyvnnrdswmpiIEfldDQHESYMLQEQQPR 132
                 89****************96555444323667788888888888887774333224679*******777666666665552233244444455444444 PP

                 .HHC....TSEEEEEEETTTTCSHHHHHHHHHHH CS
    MMR_HSR1  73 .lee....adlillvvdaseeklkpldeeleell 101
                  +++    +++ l+ ++ + ++lkpld e+ + l
  KHJ34415.1 133 rVDKidlrVHACLYFIRPTGHTLKPLDIEVMKRL 166
                 2222112245555555533456777777766665 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.8   0.1   1.5e-07   0.00011       5      87 ..      33     107 ..      30     115 .. 0.80
   2 ?    3.5   0.0     0.061        46     120     154 ..     167     214 ..     159     335 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.8 bits;  conditional E-value: 1.5e-07
                 EEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHH CS
    GTP_EFTU   5 nigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisleketkkylinliDtPGHvdFskev 87 
                 +i+++g    GKtT++ +L  +t +   +++++         ++   + + i+++ ++le++  k ++++iDtPG  d++++ 
  KHJ34415.1  33 TIMVAGESGLGKTTFINTLFSTTIKNYADHKRRH--------AKQVDKTVEIEITKAELEEKFFKVRLTVIDTPGFGDYVNNR 107
                 68999***************88888777555543........3344455567777788887888****************986 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.061
                 HTTTEEEEEEESCGST.HHHHHHHHHHHHHHHHHH............H CS
    GTP_EFTU 120 kegvpiivfiNKmDrl.kaelkeiveevkqklsrk............e 154
                 + +v++i +i K+D l  a++   ++ ++  ++++            +
  KHJ34415.1 167 SSRVNLIPVIAKADTLsPADFALFKQRIRAVIEAQgikiytppieedD 214
                 57899***********87888888888887775555555555554440 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   6.9e-08   5.2e-05      93     162 ..      25     101 ..       6     104 .. 0.75
   2 ?    0.7   0.0      0.59   4.4e+02      44      81 ..     167     207 ..     154     235 .. 0.69

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 6.9e-08
                  HHHHCTTSEEEEECSTTSSHHHHHHHHCTT-----S--------------SEEEEEETT.......TEEEESS-SSS CS
  RsgA_GTPase  93 lkellkdktsvlvGqSGvGKStLinallpelelktgevseklgrGkhTTtavellelae.......gglliDtPGfr 162
                  ++++ +  t++++G+SG GK+t+in+l +++  + ++ ++++ +    T + e+ + +          ++iDtPGf 
   KHJ34415.1  25 VAKRGAAFTIMVAGESGLGKTTFINTLFSTTIKNYADHKRRHAKQVDKTVEIEITKAELeekffkvRLTVIDTPGFG 101
                  555556678899*****************9888888888777777777777777665433344444689******96 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.59
                  HTT-EEEEEEE-GGG--HHH...HHHHHHHHHHHTTSEEEE CS
  RsgA_GTPase  44 ekgiepvivlnKiDlleeee...eleelkeelealgyevll 81 
                  +++++++ v+ K+D l+ ++     +++++ +ea g+++++
   KHJ34415.1 167 SSRVNLIPVIAKADTLSPADfalFKQRIRAVIEAQGIKIYT 207
                  678899999********999665445555566666666665 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   8.9e-06    0.0066       8      51 ..      34      82 ..      28     145 .. 0.74
   2 ?   -1.8   0.1       4.7   3.5e+03      62      87 ..     310     333 ..     277     372 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 8.9e-06
      AAA_22  8 lvvtGesGtGKTtllrrlleqldeeakaee......erpevvfvtlpsst 51
                ++v GesG GKTt +++l+++  + ++a++      + +++v++++++ +
  KHJ34415.1 34 IMVAGESGLGKTTFINTLFSTT-IKNYADHkrrhakQVDKTVEIEITKAE 82
                7899***************996.556666666777755666666666555 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 4.7
      AAA_22  62 ralglelkaerlsseellealeqalr 87 
                 r+l++++ +   ++e l+++++++++
  KHJ34415.1 310 RKLDNPKFK--EEEESLRKRFTEQVK 333
                 556666666..566666666666655 PP

>> Pox_A32  Poxvirus A32 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   6.9e-06    0.0052      12      41 ..      30      59 ..      20      63 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 6.9e-06
     Pox_A32 12 kpFrlalvGgsGsGktvyLlsLlrtlvkky 41
                + F + + G+sG Gkt+++  L++t +k+y
  KHJ34415.1 30 AAFTIMVAGESGLGKTTFINTLFSTTIKNY 59
                5799************************99 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1     1e-05    0.0076       2      68 ..      34     102 ..      33     112 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1e-05
                 EEEESSTTSSHHHHHHCHCT-CCC....-EEETTTTEEEEEEECG.GSGGCTTBTTTTCEEEEEEEE-SGGC CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfs....ekekstigvdfltkevt.kikgvendkkvkkvklniWDtaGqer 68 
                 +++ G+sg GKt++++ + + +++    +k++   +vd   k+v+ +i++ e ++k  kv+l + Dt G  +
  KHJ34415.1  34 IMVAGESGLGKTTFINTLFSTTIKnyadHKRRHAKQVD---KTVEiEITKAELEEKFFKVRLTVIDTPGFGD 102
                 8999*************999887622113333333333...333215667788888899******9998655 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.4e-05      0.01       2      67 ..      33     108 ..      32     136 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.4e-05
                 EEEEESSTTSSHHHHHHHH....HTS--SS--TTTS---SS-EEEEE..EETT....EEEEEEE--SCCCTTCCHH CS
        AIG1   2 tivlvGktgnGkSaTgNsi....lgkkaFesklsaqsvtkkcqkksr..twdg....kkinViDTPglfdlsvsad 67 
                 ti++ G +g Gk + +N++    +++ a + + +a++v k+++ + +  + ++     ++ ViDTPg  d  ++ d
  KHJ34415.1  33 TIMVAGESGLGKTTFINTLfsttIKNYADHKRRHAKQVDKTVEIEITkaELEEkffkVRLTVIDTPGFGDYVNNRD 108
                 899****************555555555667778899988887765532333234436799******998877666 PP

>> Casc1_N  Cancer susceptibility candidate 1 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   6.8   2.1e-05     0.016       5      67 ..     318     379 ..     315     383 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.1e-05
     Casc1_N   5 eeEeeRlraeeeererleeerrekeereqlaaeqarrkeeleelkplleerkealeklkaear 67 
                 +eEee lr+   e+ ++ee r +++e++ l  e++r+++ le +++++++ + +l +++++a 
  KHJ34415.1 318 KEEEESLRKRFTEQVKIEEHRFRQWEQK-LISERDRLNKDLENTHAVIKNLESELDQMQSAAA 379
                 79*********************99888.69************************99988775 PP

>> IIGP  Interferon-inducible GTPase (IIGP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   1.8e-05     0.014      31      56 ..      27      52 ..      19     116 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.8e-05
                HHT--EEEEEEESTTSSHHHHHHHHT CS
        IIGP 31 iesaklkiavtGdsGnGkssFinaLR 56
                +  a   i+v G+sG Gk +Fin+L 
  KHJ34415.1 27 KRGAAFTIMVAGESGLGKTTFINTLF 52
                5567789*****************94 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   3.5e-05     0.026       4      22 ..      33      51 ..      30     125 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.5e-05
      AAA_24  4 kiliyGpsgiGKTtlakel 22
                 i++ G+sg GKTt++++l
  KHJ34415.1 33 TIMVAGESGLGKTTFINTL 51
                699**************99 PP

>> KAP_NTPase  KAP family P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0     6e-05     0.045      18      49 ..      29      83 ..      19     378 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6e-05
  KAP_NTPase 18 atpivvgLygkWGsGKssllnkledelkefa.......................k 49
                +  +++++ g+ G+GK++++n l +   ++                         
  KHJ34415.1 29 GAAFTIMVAGESGLGKTTFINTLFSTTIKNYadhkrrhakqvdktveieitkaeL 83
                6789*****************9988766654466666666666555555555550 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.3   0.00012     0.086       2      68 ..      34     110 ..      33     116 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00012
                 EEEEESTTSSHHHHHHHHH..........HSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHH CS
         Ras   2 lvlvGdsavGKtslllrfv..........kdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrely 68 
                 +++ G+s+ GKt++++             k +  ++ ++T+ ++ +++e+e +  +v+l++ DT G  ++ + r++ 
  KHJ34415.1  34 IMVAGESGLGKTTFINTLFsttiknyadhKRRHAKQVDKTVEIEITKAELEEKFFKVRLTVIDTPGFGDYVNNRDSW 110
                 5788********9987643111111111123467788999999999999999999***********99998777665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   0.00016      0.12      26      51 ..      33      58 ..      22     134 .. 0.81
   2 ?   -1.6   0.1       4.2   3.2e+03      81      81 ..     338     338 ..     268     381 .. 0.54

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 0.00016
      AAA_16 26 lvllsGesGvGKsslvrellralekd 51
                 +++ GesG GK++ +++l+    k+
  KHJ34415.1 33 TIMVAGESGLGKTTFINTLFSTTIKN 58
                689****************9755555 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 4.2
      AAA_16  81 l 81 
                  
  KHJ34415.1 338 R 338
                 2 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00016      0.12     128     173 ..      30      80 ..      13      93 .. 0.72
   2 ?   -1.2   0.0       1.1   8.4e+02      81     118 ..     310     347 ..     277     364 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00016
       T2SSE 128 erglilvsGgTgsGKttllyallkeinks.....derivtvEDpvEiqleg 173
                 +  +i+v+G  g GKtt++++l ++  k+      ++   v  +vEi++ +
  KHJ34415.1  30 AAFTIMVAGESGLGKTTFINTLFSTTIKNyadhkRRHAKQVDKTVEIEITK 80 
                 5679***************99876533322433345556677777777655 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.1
       T2SSE  81 rvvllPvvagealviRkksakeltlddlgaeealkeki 118
                 r +  P +++e+ ++Rk+ ++++++++ ++++  ++ i
  KHJ34415.1 310 RKLDNPKFKEEEESLRKRFTEQVKIEEHRFRQWEQKLI 347
                 55567889999999999999999999988887776655 PP

>> FOXP-CC  FOXP coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.9   0.00017      0.13      28      63 ..     320     355 ..     316     361 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.00017
     FOXP-CC  28 seHalddkstaqlrvqmqvvqqlekqlvkEkerLqa 63 
                 +e +l ++ t+q+++  ++ +q e++l+ E++rL++
  KHJ34415.1 320 EEESLRKRFTEQVKIEEHRFRQWEQKLISERDRLNK 355
                 67789999**************************85 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   0.00013       0.1       2      31 ..      33      62 ..      32      68 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00013
                CEEEEC-TTTCHHHHHHHHHHHHCTS-SCC CS
       NACHT  2 lvilqGeaGsGKTtLlqklalawaegklpq 31
                ++++ Ge+G GKTt++  l ++  +++ ++
  KHJ34415.1 33 TIMVAGESGLGKTTFINTLFSTTIKNYADH 62
                689***************999877776666 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00024      0.18      17      47 ..      26      56 ..      14      92 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00024
                     HHCTSSS-EEEECSTTSSHHHHHHHHHHHST CS
  Sigma54_activat 17 kvaktdlsvlitGesGtGKellaraiheask 47
                     +      ++++ GesG GK+++ +++++++ 
       KHJ34415.1 26 AKRGAAFTIMVAGESGLGKTTFINTLFSTTI 56
                     33344589***************99998433 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   0.00038      0.28      13      37 ..      33      57 ..      26     138 .. 0.73
   2 ?   -2.1   0.1       6.8   5.1e+03      53      70 ..     336     353 ..     283     380 .. 0.56

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00038
                EEEEEESTTSSHHHHHHHHTTSS-- CS
                xxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkllagllkp 37
                ++ + Ge+G GK+t++++l   + +
  KHJ34415.1 33 TIMVAGESGLGKTTFINTLFSTTIK 57
                56789************99887765 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 6.8
                 -HHHCCHCEEEE-SS--S CS
                 xxxxxxxxxxxxxxxxxx RF
    ABC_tran  53 eleslrkeigvlpqepql 70 
                 e+++ + e + +++ ++l
  KHJ34415.1 336 EHRFRQWEQKLISERDRL 353
                 222222222223333333 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00028      0.21      37      60 ..      29      52 ..       2      62 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00028
                  GS-.SEEEE--TTSSHHHHHHHHH CS
  FtsK_SpoIIIE 37 kmashllvaGatgsGKStalntLi 60
                  ++a  ++vaG +g GK+t++ntL 
    KHJ34415.1 29 GAAFTIMVAGESGLGKTTFINTLF 52
                  333479****************96 PP

>> Adaptin_binding  Alpha and gamma adaptin binding protein p34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   5.9   0.00023      0.17      45     102 ..     297     380 ..     117     382 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00023
  Adaptin_binding  45 lekeeeeqdpsqpastepdksaaesesadaef..........................lfggdeaarledlesllsklqqakdn 102
                       ++e+ +  + +p +++++k+++e+es+ ++f                          ++ ++++a + +les l+++q+a+ +
       KHJ34415.1 297 TQMETRKFGEARPRKLDNPKFKEEEESLRKRFteqvkieehrfrqweqkliserdrlnKDLENTHAVIKNLESELDQMQSAAAR 380
                      34555566677888899**********************************888888777788888888***********9876 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.3    0.0071       5.3       4      27 ..      34      57 ..      32     131 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0071
   PduV-EutP  4 illiGkvgsGKttLtqalkgeelk 27
                i++ G++g GKtt  ++l   ++k
  KHJ34415.1 34 IMVAGESGLGKTTFINTLFSTTIK 57
                899999999999999988775554 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1     0.028        21       1      21 [.      34      54 ..      34      58 .. 0.88
   2 ?    7.3   0.0    0.0062       4.6      95     119 ..      84     109 ..      52     130 .. 0.54
   3 ?    0.1   0.7      0.96   7.2e+02      54      88 ..     327     362 ..     293     380 .. 0.52

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.028
                EEEEEBTTTTHHHHHHHHHTS CS
   Dynamin_N  1 iavvGsqSsGKSSvlnaLlge 21
                i+v G+   GK++++n L   
  KHJ34415.1 34 IMVAGESGLGKTTFINTLFST 54
                7999*************9865 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0062
                 EEETTS-SEEEEE---B-S.SSGTTS CS
   Dynamin_N  95 ilsllvkgltlvDlPGlds.vnkrdq 119
                   ++ + +lt++D+PG+ + vn+rd 
  KHJ34415.1  84 EEKFFKVRLTVIDTPGFGDyVNNRDS 109
                 345567899********985666665 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.96
                 SEEEE.T-EB--CHHHHHHHHHHHHHHHTSSSS--S CS
   Dynamin_N  54 elkek.ekkledfsevreeieketekiagankgisk 88 
                 ++ e+ + +++ f + ++++ +e++++++ ++++  
  KHJ34415.1 327 RFTEQvKIEEHRFRQWEQKLISERDRLNKDLENTHA 362
                 333334555555555555555555555544444333 PP

>> DegS  Sensor protein DegS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.97   7.3e+02      40      68 ..      67      96 ..      50     106 .. 0.63
   2 ?   -0.3   0.3      0.91   6.8e+02      69     106 ..     289     327 ..     283     330 .. 0.82
   3 ?    9.8   5.1    0.0007      0.52      86     134 ..     329     377 ..     311     380 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.97
        DegS 40 keevsevik.evdklekkerkarkrLaeVs 68
                 ++v ++++ e+ k e +e+  + rL+ ++
  KHJ34415.1 67 AKQVDKTVEiEITKAELEEKFFKVRLTVID 96
                344444444355667778888888887765 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.91
        DegS  69 kdFkkyseeeik.eaYeeakelqvelallrekEkqlrer 106
                 ++++ y+  +++ + + ea+  +++    +e+E++lr+r
  KHJ34415.1 289 SHYEAYRATQMEtRKFGEARPRKLDNPKFKEEEESLRKR 327
                 57888888888624789999999999999999*999998 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.0007
        DegS  86 akelqvelallrekEkqlrerRdelerrLkklketierAeklvsqvgvv 134
                 ++++++e    r+ E++l++ Rd+l+++L++++++i+  e+ + q++++
  KHJ34415.1 329 TEQVKIEEHRFRQWEQKLISERDRLNKDLENTHAVIKNLESELDQMQSA 377
                 5689999999***************************999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1332  (0.074293); expected 358.6 (0.02)
Passed bias filter:                      677  (0.0377601); expected 358.6 (0.02)
Passed Vit filter:                       107  (0.00596798); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              24  [number of targets reported over threshold]
# CPU time: 0.63u 0.25s 00:00:00.88 Elapsed: 00:00:00.42
# Mc/sec: 2752.10
//
Query:       KHJ34416.1  [L=181]
Description: putative heat shock protein 30 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-20   73.7   0.5      5e-14   52.3   0.1    2.1  2  HSP20       Hsp20/alpha crystallin family
    3.3e-08   32.9   0.0    1.5e-07   30.9   0.0    1.9  1  ArsA_HSP20  HSP20-like domain found in ArsA


Domain annotation for each model (and alignments):
>> HSP20  Hsp20/alpha crystallin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   3.7e-08   0.00033       1      39 [.      48      87 ..      48      95 .. 0.87
   2 !   52.3   0.1   5.6e-18     5e-14      15     101 ..      96     180 ..      85     181 .] 0.84

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 3.7e-08
                E--SSEEEEEEEEE-TT--CCCEEEEEETTE.EEEEEE-- CS
       HSP20  1 dikeeeeefevkldvpglkkeelkvkvednr.vlvkgehe 39
                dike+++++e++ ++pg+++++++++ ++ + +++kg  e
  KHJ34416.1 48 DIKEHKDSYELQGELPGIDQKDIDIEFTEATtLTIKGRTE 87
                79************************877655*****988 PP

  == domain 2  score: 52.3 bits;  conditional E-value: 5.6e-18
                 -TT--CCCEEEEEETTEEEEEEE--...---TT----SS---EEEEEE--STTB-TTT-EEEEETTEEEEEEEBSS--..-------- CS
       HSP20  15 vpglkkeelkvkvednrvlvkgehe.eeeedekglikerssrkFsrkftLPenvdadkvkaslkdGvLtvtvpkkepekkkkerkiqi 101
                  +g+ + e+k   e  + ++k+e+  + +  ek++++ers+++Fsr+f  P  +d+d+vkas+k+G+L++ vpk +++   ++rki i
  KHJ34416.1  96 PRGFIEGEVKNGEEPSKTVIKSEEGkSSQAVEKYWVRERSVGEFSRSFGFPTAIDQDNVKASMKNGILSIIVPKAQKQ---SSRKITI 180
                 56677777777777778889998886778889******************************************9998...6788877 PP

>> ArsA_HSP20  HSP20-like domain found in ArsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.0   1.6e-11   1.5e-07       2      61 ..      54     165 ..      53     166 .. 0.97

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 1.6e-11
  ArsA_HSP20   2 deyvlkldLPfvdkeeidlsrs.gdeLtIkig....................................................nfrRqitLPsvlark 47 
                 d y+l+ +LP++d+++id++ + +++LtIk                                                       f+R++  P+ ++++
  KHJ34416.1  54 DSYELQGELPGIDQKDIDIEFTeATTLTIKGRtehsysssapprgfiegevkngeepsktvikseegkssqavekywvrersvgEFSRSFGFPTAIDQD 152
                 89*****************977699************************************************************************** PP

  ArsA_HSP20  48 evtsAkfedgvLeI 61 
                 +v +A++++g L I
  KHJ34416.1 153 NV-KASMKNGILSI 165
                 **.*********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (181 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       326  (0.0181828); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1359.44
//
Query:       KHJ34417.1  [L=247]
Description: putative proteasome component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-52  178.3   0.0    1.4e-52  178.0   0.0    1.1  1  Proteasome   Proteasome subunit
  ------ inclusion threshold ------
       0.12   12.3   0.1       0.26   11.2   0.1    1.5  1  Terminase_5  Putative ATPase subunit of terminase (gpP-like)


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.0   0.0   1.5e-56   1.4e-52       3     189 ..      10     192 ..       8     193 .. 0.96

  Alignments for each domain:
  == domain 1  score: 178.0 bits;  conditional E-value: 1.5e-56
                 HS-EEEEEEETTEEEEEEEEEEEETTEEEESSSS.TSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHCT CS
  Proteasome   3 kGttvvGikgkdgvvlaadkratagskllskstv.eKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrsg 100
                  Gt++vG+kgk+ vvl+++kr+    kl++++   +Ki  +d h+++afaGl aDar+lv++ar+eaq++rl  ++p+++e+++++va  +q ytq++g
  KHJ34417.1  10 SGTCAVGVKGKEIVVLGCEKRSA--MKLQDTRITpSKIGLLDTHVCLAFAGLNADARILVNKARNEAQSHRLVLEDPVTIEYITKYVAGVQQLYTQSGG 106
                 59*********************..99988884249*************************************************************** PP

                 TTTTSEEEEEEEEE.TTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEE CS
  Proteasome 101 rrpfgvslliagvd.eeggpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeavelavkalkealerdklsgknievav 189
                 +rpfg+s+li+g+d ++++p+Lyq++psG + ++k a aiG  s+ ++++le++ k+d+++e ++ l +k+l e+++   ++ knie+a+
  KHJ34417.1 107 VRPFGISTLIIGFDhNDKTPRLYQTEPSGIFSAWK-ANAIGRSSKTVREFLERNHKDDMDREATINLTIKSLLEVVQ---TGAKNIEIAI 192
                 **************77788***************8.*****99**********************************...8999***998 PP

>> Terminase_5  Putative ATPase subunit of terminase (gpP-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   2.8e-05      0.26      20      52 ..     142     174 ..     140     176 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.8e-05
  Terminase_5  20 AeelglkeatVysWkkrdewddldplsrveeai 52 
                  A+++g++ +tV  + +r  +dd+d++ +++ +i
   KHJ34417.1 142 ANAIGRSSKTVREFLERNHKDDMDREATINLTI 174
                  7899**********************9998877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1902.71
//
Query:       KHJ34418.1  [L=269]
Description: putative concanavalin a-like lectins glucanase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.064   12.4   0.5       0.11   11.6   0.5    1.3  1  DUF2515   Protein of unknown function (DUF2515)


Domain annotation for each model (and alignments):
>> DUF2515  Protein of unknown function (DUF2515)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.5   6.2e-06      0.11      92     138 ..      86     132 ..      81     139 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 6.2e-06
     DUF2515  92 eeskklkkplFhlLpafkVskfmekeWekfweerdkerltvaliiNE 138
                 ee +k ++ l  ++p+++  +f +++W+ fw++ d ++  v ++iN 
  KHJ34418.1  86 EEQEKDSQLLLDYVPYYSLGNFCIAIWMIFWNQSDLKMANVFVLINS 132
                 566788889999****************************9999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (269 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      233  (0.0129957); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 2142.99
//
Query:       KHJ34419.1  [L=547]
Description: putative d-lactate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-53  181.3   0.0    3.5e-53  180.8   0.0    1.2  1  FAD-oxidase_C  FAD linked oxidases, C-terminal domain
      2e-36  124.8   0.1    3.7e-36  123.9   0.1    1.4  1  FAD_binding_4  FAD binding domain


Domain annotation for each model (and alignments):
>> FAD-oxidase_C  FAD linked oxidases, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.8   0.0     4e-57   3.5e-53       4     249 ..     297     545 ..     294     546 .. 0.98

  Alignments for each domain:
  == domain 1  score: 180.8 bits;  conditional E-value: 4e-57
                    EEEEEEEEESSHHHHHHHHHHHHHH.T---SEEEEE-HHHHHHHHHTS-SSTTS-TTT-EEEEEEEEE-HHHHHHHHHHHHHHHTTT-EEEEE... CS
  FAD-oxidase_C   4 aravalvafpsfeaavkavreiaqa.giipaalelmdkkaldlveatkgakkglpdeeealllvefegddeeeaeeelealveaileatgaadvlv 98 
                    a++va ++++s+e + +a+re++ +  + ++a+elmd k+ d+v ++ + +++l++e +++ l+e++g+++ +++e+l+  +e  l++++++d+++
     KHJ34419.1 297 AVNVAYFGLDSYEMVQEAFREAKVQlSEVLSAFELMDGKSQDIVFNVTKNQRPLENEYPFYCLIETSGSNSVHDNEKLSNFLEYVLDKEIVSDGVL 392
                    7899******************************************************************************************** PP

                    .......ETGGGGGGGGHHHHHHHHHCTTEEEEEEEEEEEHHHHHHHHHHHHHHHHHHH..........EEEEEEEEEETTEEEEEEEEEEE..-- CS
  FAD-oxidase_C  99 aqdeaeaealwkaRkaalpylrdallkagvavlseDtsvPvsrladlvrdikalldkyg..........levvlfgHagdgnlhlyilfdladeae 184
                    aqd+ ++++lw +R+++++     ++++ + v+++D s+P+ +l+ lv d++ ++++ g          ++vv +gH+gd nlhl+i++++  ++ 
     KHJ34419.1 393 AQDDSQVKNLWGWREGVSE-----CAGHWGGVYKYDLSIPIRDLYGLVDDVRHRIEEAGligdtdefpvVAVVGYGHMGDSNLHLNIATRRFEKKV 483
                    *******************.....89********************************************************************** PP

                    TT--THHHHHHHHHHHHTT-----------------------THHHHHHHHHHHH-TT--BSTT- CS
  FAD-oxidase_C 185 eeraeklvdevvdlavelgGsisgEHGvGldkkaylerekgeeglalmrriKaalDPkgiLNPgk 249
                    e+ +e+  +e+   + + +Gsis+EHG Gl+kk+y+ ++++++ ++lm++iK++ D +gi+NP+k
     KHJ34419.1 484 ENILEPYIYEW---VGKRNGSISAEHGLGLAKKKYIGYSRSDTMIKLMKQIKNLYDQNGIMNPYK 545
                    ***********...**************************************************9 PP

>> FAD_binding_4  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.9   0.1   4.1e-40   3.7e-36       2     136 ..     120     255 ..     119     257 .. 0.98

  Alignments for each domain:
  == domain 1  score: 123.9 bits;  conditional E-value: 4.1e-40
                    EEEEEESSHHHHHHHHHHHHHCTSCEEEESSSTTEESTTC.SCCEEEEEETTS--EEEEETTTTEEEEETTSBHHHHHHHHHHHTTECSSGGGTTC CS
  FAD_binding_4   2 aavvrpeseeevaaalrlaneaglpvlvrGgGssllgqav.atggvvldlsrlnrileideeegtatveaGvtlgdlvealaakglllglepgsgi 96 
                    ++v++p+s+eev+++l+++n++ l v+++Gg s+l+g++v  ++ +++++sr+n+i+++de +g+++v aG++l+ ++e+l++k+++++l+ g+  
     KHJ34419.1 120 KLVLKPGSTEEVSEILKYCNANMLAVVPQGGNSGLVGGSVpIFDEIIINMSRMNTIRSFDEISGVLVVDAGCILESVDEFLKKKNYIFPLDLGAKG 215
                    5799********************************999999****************************************************** PP

                    GSBHHHTTTTT-EETTEEGG--HHGTEEEEEEEETTSEEE CS
  FAD_binding_4  97 pgtvGGaiatnagGygsekyGlirdnvlglevvladGevv 136
                    ++ +GG+++tnagG +  +yG+++ nvlg e+vl++G+v 
     KHJ34419.1 216 SCQIGGNVSTNAGGLRLLRYGSLHGNVLGIEAVLPNGTVM 255
                    **************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (547 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 4247.35
//
Query:       KHJ34420.1  [L=535]
Description: hypothetical protein EV44_g5658 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-11   43.6  28.1    7.1e-09   35.9   7.2    3.9  4  DUF4048   Domain of unknown function (DUF4048)


Domain annotation for each model (and alignments):
>> DUF4048  Domain of unknown function (DUF4048)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.9      0.46   8.3e+03      10      48 ..      48      85 ..      40      97 .. 0.57
   2 ?   -3.6   0.7      0.44   7.9e+03     136     136 ..     187     187 ..     147     211 .. 0.46
   3 !   14.3   0.3   1.5e-06     0.027       1      37 [.     215     250 ..     215     260 .. 0.64
   4 !   35.9   7.2   3.9e-13   7.1e-09      95     188 ..     294     368 ..     280     433 .. 0.58

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 0.46
     DUF4048 10 pekdsvklpfpqaqeskssesdaerasrlPRsatlPsvd 48
                +++++ ++p p +q+ ++s+  +  +   PR+a++ s+ 
  KHJ34420.1 48 ANRSTICHPRPRSQSYRQSRL-SMSIPIAPRNASISSII 85
                444444555555555554332.33344567777776664 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.44
     DUF4048 136 r 136
                 +
  KHJ34420.1 187 E 187
                 1 PP

  == domain 3  score: 14.3 bits;  conditional E-value: 1.5e-06
     DUF4048   1 HtRtLSLLspekdsvklpfpqaqeskssesdaerasr 37 
                 H+RtLSLLspek+s+ ++ ++++ +++ + +++++++
  KHJ34420.1 215 HARTLSLLSPEKSSFIQSKEMTTVQNQ-RATEKKTTK 250
                 9*********99888444433333222.334444444 PP

  == domain 4  score: 35.9 bits;  conditional E-value: 3.9e-13
     DUF4048  95 dlkdGLWtFlEDirQAtvGeeginatesRtkqasqtskaprrqskrsslkasssrerasgsssrssssssskkaasaarkksgkdstskdievs 188
                  +k G+WtF+ED+rQ tvG+egin   + +++ s++  + +r+  +s+++++ ++++  + s+                    ++   + i++s
  KHJ34420.1 294 GFKAGMWTFFEDLRQVTVGDEGINKKSASKISISESLINISRPVAKSNSENTDNKNKLMKIST-------------------PPQVCENLIDIS 368
                 48899*******************999999988887777777777777777775554222222...................222222233333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1261  (0.070333); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 4011.19
//
Query:       KHJ34421.1  [L=596]
Description: putative alkaline phosphatase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.8e-42  143.2   0.0    1.9e-41  142.3   0.0    1.5  1  PhoD      PhoD-like phosphatase


Domain annotation for each model (and alignments):
>> PhoD  PhoD-like phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.3   0.0   1.1e-45   1.9e-41      17     313 ..     274     539 ..     250     570 .. 0.79

  Alignments for each domain:
  == domain 1  score: 142.3 bits;  conditional E-value: 1.1e-45
        PhoD  17 yrelaee....edlDlvlhlGDyiYeygpgeyaseaaelgreveppkeivtladYReryaqyktdadlqaahaaapfivvwDDHEvaNnswsggaenhq 111
                 +++la+      + +++l+lGD+iY +                +p++  +t +dYR++y+q ++++d+  + +++++i+v+DDHE+aN+ w  ++    
  KHJ34421.1 274 FKHLAQGlkyfPRAQFMLFLGDFIYID----------------VPKRFGITAEDYRREYRQVYASPDWPLVGQNLSWIHVLDDHEIAND-WDRRT---- 351
                 566666555556899************................46678999**************************************.98833.... PP

        PhoD 112 eetegdfekrkaaAlqAyfEwmPirea.kp....geeeriyrsfeyGdladlflLDtRqyrrdqavsyegdeleaaeaevkdpartlLGeeQeqwLkae 205
                        + +  +A++++++++ + ++  p    ++++  y +f+ G+ a++f+LDtR+yr++                +k++ +t+LG+ Q++ + + 
  KHJ34421.1 352 -------TGLYRSAVDPWHHYQTVANPpSPkhilSPNNLTYYEFTQGP-ASFFMLDTRSYRDSSRD-----------IPAKAKGKTMLGSSQLSAFLDF 431
                 .......345689********9998874434455677888********.**************996...........3356789*************** PP

        PhoD 206 Lkasrar...WkvlaqqvlmskvdldaelaegalpvnlDawdGypaeRerlleti....keakirnvVvLtGDvHaawandldykdpdg.....eavgv 292
                 L++ +a+   Wk++ ++++++k++          +  +D+w Gy  eR+ +le++    ++++  ++VvL+GD+H+++a+ +   d  g     ++ + 
  KHJ34421.1 432 LRKPEAEgvkWKFVISSIPFTKNW---------RVNAQDTWAGYLNERKIILEAMwdasHQNN-VKIVVLSGDRHEFAATAFPPPD--GgkwplSSTVY 518
                 ******99****************.........46679***********77776644315555.7899**************3333..224677899** PP

        PhoD 293 Efvtgsvssgglgeylaeaad 313
                 E ++g++s+  l   +  + d
  KHJ34421.1 519 EYSVGPLSQFYLPIPTYMQFD 539
                 ********9877666663333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (596 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4196.71
//
Query:       KHJ34422.1  [L=1198]
Description: putative ubiquitin carboxyl-terminal hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-83  277.9   0.7    2.4e-81  272.6   0.2    2.9  3  USP7_ICP0_bdg  ICP0-binding domain of Ubiquitin-specific prot
    9.2e-71  237.8   1.4    1.2e-68  230.9   0.1    3.5  4  USP7_C2        Ubiquitin-specific protease C-terminal
    7.9e-49  166.5   2.0    1.7e-48  165.4   2.0    1.6  1  UCH            Ubiquitin carboxyl-terminal hydrolase
    6.1e-22   78.6   0.2    1.8e-21   77.1   0.2    1.8  1  UCH_1          Ubiquitin carboxyl-terminal hydrolase
    3.1e-06   27.3   0.0    1.4e-05   25.2   0.0    2.2  1  MATH           MATH domain
  ------ inclusion threshold ------
       0.15   12.8   0.0         14    6.5   0.0    3.3  3  YukD           WXG100 protein secretion system (Wss), protein


Domain annotation for each model (and alignments):
>> USP7_ICP0_bdg  ICP0-binding domain of Ubiquitin-specific protease 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0     0.019        57     188     214 ..     630     656 ..     625     656 .. 0.93
   2 !  272.6   0.2   8.1e-85   2.4e-81       1     240 []     654     966 ..     654     966 .. 0.92
   3 ?    2.0   0.0     0.037   1.1e+02      83     125 ..    1018    1063 ..    1013    1070 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.019
  USP7_ICP0_bdg 188 LskkmtYdqlaekvaekLkvdptklrf 214
                    L +k + ++l+++v++  +vdp ++r+
     KHJ34422.1 630 LLRKSSLQDLIDQVGQDTDVDPRRIRM 656
                    889999*******************96 PP

  == domain 2  score: 272.6 bits;  conditional E-value: 8.1e-85
  USP7_ICP0_bdg   1 vRlWvmvnrqnkTvRpdqpledeeesktveelreklas.kqaelrlylEvle..de..............lppvkkeddillFlKlfdpekqtLsy 79 
                    +R+Wvmv rqnkT+Rpdqp++d++   ++ee+++k+a  k+ +++l++Ev+e  d+              +  + k+d i+lFlK+f++++q+L++
     KHJ34422.1 654 IRMWVMVGRQNKTIRPDQPIQDANI--SIEEAYQKMAGhKNGDFKLWAEVAEevDNegnaiwptcpalnaNRLPIKSDIIILFLKHFNVQAQQLNC 747
                    7************************..**********84677**********54215778999999999844466899****************** PP

  USP7_ICP0_bdg  80 vghvyvskeskvsdlvpeineragl......psdtelllyEEikpnmieilklkqtlkkaelqdGdIicfqkelse.e.................. 150
                    vg +y+ske+kv+dl+p+i++++g+       ++ +l+l+EEikp+mie++k+kqtlk+aelqdGdIicfq + ++ +                  
     KHJ34422.1 748 VGYIYMSKEKKVEDLLPFILKKMGWpdktsnGEKLQLKLFEEIKPTMIEPMKAKQTLKAAELQDGDIICFQLSTNDtKldetafvknnvkspvnvm 843
                    *************************5555433444788*********************************6666533667899999999****** PP

  USP7_ICP0_bdg 151 ............................ekdelpdakeyydfllnrveVtFkpk.....ekpkdeeftleLskkmtYdqlaekvaekLkvdptklr 213
                                                ++d + da+++yd l+n++ VtF+p+     + ++ e+ftl+Ls+k+tYdq+a++v+++L+vdpt++r
     KHJ34422.1 844 nltdrnasvkleksistldmarnnylrlPQDFIDDARSFYDWLANKKDVTFSPHplrntNPENLETFTLTLSNKYTYDQMATRVGHYLNVDPTHIR 939
                    *********************************************************97777799******************************* PP

  USP7_ICP0_bdg 214 fttvnaasgkpkapikrsnqetlkdil 240
                    f+t+++ +g+pk ++kr++++t++ +l
     KHJ34422.1 940 FWTCHSGTGAPKLAVKRTSSQTVNAML 966
                    *****************8888***997 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.037
  USP7_ICP0_bdg   83 vyvskeskvsdlvpeineragl...psdtelllyEEikpnmieilk 125 
                     ++v+k+  v+dl++ + ++a+l   + + ++++yE  ++++ + ++
     KHJ34422.1 1018 ILVPKNGCVEDLIQALIKKAQLedeETGGPFRVYETHNSKIYKVIN 1063
                     67999*****************665556789999988877766665 PP

>> USP7_C2  Ubiquitin-specific protease C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.46   1.4e+03      41      90 ..     632     677 ..     627     699 .. 0.77
   2 ?    3.1   0.1     0.023        68      37      71 ..     751     789 ..     727     833 .. 0.72
   3 ?   -1.9   0.0      0.77   2.3e+03      32      74 ..     907     946 ..     889     953 .. 0.85
   4 !  230.9   0.1     4e-72   1.2e-68       2     206 .]     983    1186 ..     982    1186 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.46
     USP7_C2  41 kngtvkdlleelqkkvklseeeskklrllevsnhkiqkvlkedealesln 90 
                 ++++ +dl++++ +  +++    +++r++ +  ++  k +++d+++++ n
  KHJ34422.1 632 RKSSLQDLIDQVGQDTDVD---PRRIRMWVMV-GRQNKTIRPDQPIQDAN 677
                 6678899999999998776...5699999665.56677788888888765 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.023
     USP7_C2  37 llvpkngtvkdlleelqkkvklsee....eskklrllev 71 
                 ++++k+++v+dll  + kk++ +++    e+ +l+l+e 
  KHJ34422.1 751 IYMSKEKKVEDLLPFILKKMGWPDKtsngEKLQLKLFEE 789
                 799*****************7755511014445566655 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.77
     USP7_C2  32 eeelellvpkngtvkdlleelqkkvklseeeskklrllevsnh 74 
                  e+++l ++++ t +++ + + + ++++    +++r+++++++
  KHJ34422.1 907 LETFTLTLSNKYTYDQMATRVGHYLNVDP---THIRFWTCHSG 946
                 47899999999999999999999999975...59999999875 PP

  == domain 4  score: 230.9 bits;  conditional E-value: 4e-72
     USP7_C2    2 lyYevLsislkElEnkksikvtwlseklkkeeelellvpkngtvkdlleelqkkvklsee.eskklrllevsnhkiqkvlkedealeslndsttlra 97  
                  l+Ye+L+isl+El++kk +kv+wlse+++k +e+++lvpkng v+dl+++l kk++l++e + + +r++e++n+ki+kv+++d++++ ++d+++++a
  KHJ34422.1  983 LFYEILEISLSELDTKKALKVFWLSEGVSKVDEYDILVPKNGCVEDLIQALIKKAQLEDEeTGGPFRVYETHNSKIYKVINKDYQVAGITDYVNVVA 1079
                  9********************************************************6554999********************************* PP

     USP7_C2   98 eeipedeleleedekliqvfhFskepskthGiPFlfklkegEtfsetkeRlqkrlgvkdkeFekiKfalvtrsky.kpeyledddlvlldllskedd 193 
                  e+ip +++e +e  +++ +fhF++epsk+hG+PF+f++++gE+f++tk+Rl+kr+g+k+k FekiKfa+vtr+++ kp yl+dd  ++ ++l +++d
  KHJ34422.1 1080 ERIPTEDIEFSEPGNWVYAFHFQNEPSKAHGVPFIFRTIDGERFADTKKRLEKRTGLKGKVFEKIKFAIVTRGSFsKPFYLNDDV-IIEEYLAHRED 1175
                  ****99999955559***********************************************************87999***984.55588887888 PP

     USP7_C2  194 ldlLgLdHpdksr 206 
                    +LgLdHpd+sr
  KHJ34422.1 1176 --MLGLDHPDRSR 1186
                  ..*********96 PP

>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.4   2.0   5.7e-52   1.7e-48       1     257 []     230     546 ..     230     546 .. 0.90

  Alignments for each domain:
  == domain 1  score: 165.4 bits;  conditional E-value: 5.7e-52
                 -EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHHSH-CCEE--HHHHHHHHHHSGGGTSSSTCE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   1 tGlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkellkskskavsPkklkktlsklaksfsgykqqD 99 
                 +Gl+N G+tCy+ns+lQ+L+ ++ +r+ ++++ ++++es ++               a+ l++lf++l+ ++++av +++l+k+++++ ++  +++qqD
  KHJ34422.1 230 VGLKNQGATCYLNSLLQSLYFTNAFRKAVYQIPTQDEESLTN--------------SAYTLQRLFYQLQ-TSKCAVGTSELTKSFGWETRH--IFEQQD 311
                 69*****************************64444433333..............689**********.689******************..89**** PP

                 HHHHHHHHHHHHHHHHCCHCCCHHHHHHCCCTTSHHHHHH-EEEEE..................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................................................... RF
         UCH 100 aqEflaflLdqlhedlnrevaeekwkkhlkrndslitdlfegqlks..................................................... 145
                 +qE+ + l+++++e+++            ++ +++  +lf g++++                                                     
  KHJ34422.1 312 VQELSRKLMERMEEKMKG-----------TEAEKVLPRLFSGKVRTyiscinvnyeshrledfwdiqlnvsgnkdlessfqdyiqveimdgenqymagd 399
                 ******************...........7888999999999999999999999999****************************************** PP

                 .........EEEEEEB-SEEEEEEESEEETEE...EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-BEEEEEEEEEESCTTSEEEEEEEECTTTTEEE CS
                 .........xxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 146 .........klklkrlPeiLiihlkRfsynss...ksKlntkvefpeeldlssylaeekkkkteekkkYeLiavvvHsGslssGHYvayiknekngkWy 232
                           + ++++P++L+++lkRf+y+ +     K+n++ efpe  d+s+ylae+++k+  e  +Y+L++v+vHsG l+ GHY+a+ik ek+g +y
  KHJ34422.1 400 eyklqdakkGVIFETFPDVLHLQLKRFQYDVErdaMMKINDRYEFPEIFDASPYLAENADKS--EPYIYQLHGVLVHSGDLNAGHYYAFIKPEKDGWFY 496
                 ********99*******************9888899********************888876..6799***********************9999999* PP

                 EEETTEEEEE-HH.......................CCCTT..CEEEEEE CS
                 xxxxxxxxxxxxx.......................xxxxx..xxxxxxx RF
         UCH 233 kydDetvkevkee.......................eevls..sayiLfY 257
                 kydD++v++ +                         + +l   +ay+L+Y
  KHJ34422.1 497 KYDDDKVTRATMRevlednyggeylhpkghiplrrnKPILRqnNAYMLVY 546
                 ***********887777777777777776666665533333789999999 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.1   0.2     6e-25   1.8e-21       1     301 [.     230     491 ..     230     503 .. 0.80

  Alignments for each domain:
  == domain 1  score: 77.1 bits;  conditional E-value: 6e-25
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   1 sGLEnhivnsYlNslLQvlyfipplrnlalshlakeckkehcLlcElgflfdmldkakglncqasnFlralssipeasalglileeeeetekssaisls 99 
                 +GL n+ +++YlNslLQ lyf+  +r+++ +  +++ ++    ++ l+ lf+ l+++k   + +s+++++++    +++ ++++++  +          
  KHJ34422.1 230 VGLKNQGATCYLNSLLQSLYFTNAFRKAVYQIPTQDEESLTNSAYTLQRLFYQLQTSK-CAVGTSELTKSFG----WETRHIFEQQ--D---------- 311
                 8*************************88888886777777778899999999999987.6789*********....6778887332..2.......... PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 100 sliqsfnrflldqlekelketkknsseeesaieqllgtkaettirclkCgseksrksstlvldlkyPkpsnekkeakvtfasilksslerekttrawCe 198
                   +q++ r l++++e++ k t+     +e+ + +l++ k+ t i+c++ + e++r +++  ++l    + + +k+ +++f+++++  +    +++++ +
  KHJ34422.1 312 --VQELSRKLMERMEEKMKGTE-----AEKVLPRLFSGKVRTYISCINVNYESHRLEDFWDIQL----NVSGNKDLESSFQDYIQVEIMD-GENQYMAG 398
                 ..689************99975.....78899********************************....555688899***********99.9999**** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 199 kCkryqpteqrktvknlPpvLalnakleeee.elelwkt...knwlpleiklsldedknleeklkeerekakaekeikvYeLqsvvvhigdskesghLv 293
                    + q  +++  ++ +P+vL l++k+++ + e++ +++   +  +p+ +++        +  l e+     +++e ++Y+L++v vh gd  ++gh++
  KHJ34422.1 399 DEYKLQDAKKGVIFETFPDVLHLQLKRFQYDvERDAMMKindRYEFPEIFDA--------SPYLAEN----ADKSEPYIYQLHGVLVHSGDL-NAGHYY 484
                 **************************99554122222222213444444444........2222222....457789*************55.5***** PP

                 xxxxxxxx RF
       UCH_1 294 slvkvaek 301
                 +++k  ek
  KHJ34422.1 485 AFIKP-EK 491
                 ****2.22 PP

>> MATH  MATH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   4.7e-09   1.4e-05      13      95 ..      86     180 ..      76     205 .. 0.84

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 4.7e-09
        MATH  13 rys.kveerfnipWrlkikrkng...flglyLrcnkeeele.....rkwsieveftlklvssngks.vkkkdt.hkfeke.kgwgwgkfiswdkl 95 
                 r++ +++  +++pWr+ + +k++   ++++yL+   e+ +e     ++ s+  +f + l +++ ++ ++ +   h+f+k+  +wg+++f+++ kl
  KHJ34422.1  86 RHRsPIFWCGGHPWRILMFPKGNnvdYCSVYLEQGYEDGSEvgpvpQNFSCCIQFGFVLYNPDAPTcFTHNTAnHRFTKDeGDWGFTRFVELRKL 180
                 5555899999*************9999*******99999999************************85554446*****9778999998776655 PP

>> YukD  WXG100 protein secretion system (Wss), protein YukD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0         2   5.9e+03      28      68 ..     637     678 ..     635     679 .. 0.81
   2 ?    6.5   0.0    0.0046        14      23      74 ..     759     815 ..     753     816 .. 0.60
   3 ?    1.9   0.0      0.12   3.7e+02      12      41 ..    1015    1044 ..    1010    1052 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 2
                 HHHHHHS-...--S---TT-EEEEGGG.EEEETTSBCGGGT- CS
        YukD  28 palvrllgepddeagrpggwsLarvgg.apLsgdrtLaeagV 68 
                 ++l++++g+++d ++r+ +++  +  +   + +d+ +++a++
  KHJ34422.1 637 QDLIDQVGQDTDVDPRRIRMWVMVGRQnKTIRPDQPIQDANI 678
                 678888988888888888888888888899999999999887 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0046
                 TTHHHHHHHHHS-....--S---TT-EEE...EGGG.EEEETTSBCGGGT--TT-EE CS
        YukD  23 vaellpalvrllg.epddeagrpggwsLa...rvgg.apLsgdrtLaeagVrDGdlL 74 
                 v++llp +++ +g ++  + g++ ++ L    +++  +p++ ++tL++a+ +DGd++
  KHJ34422.1 759 VEDLLPFILKKMGwPDKTSNGEKLQLKLFeeiKPTMiEPMKAKQTLKAAELQDGDII 815
                 5666666666666433333233333322211122333799***************98 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.12
                  EEEEEEETTSBTTHHHHHHHHHS-...--S CS
        YukD   12 rvDlaLPadvpvaellpalvrllgepddea 41  
                  ++D+ +P +  v++l++al++ ++ +d+e+
  KHJ34422.1 1015 EYDILVPKNGCVEDLIQALIKKAQLEDEET 1044
                  79********************98333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       650  (0.0362541); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.83u 0.25s 00:00:01.08 Elapsed: 00:00:00.44
# Mc/sec: 8205.53
//
Query:       KHJ34423.1  [L=897]
Description: putative periodic tryptophan protein 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.3e-37  126.3  34.0    3.1e-08   34.2   0.6   12.8 14  WD40           WD domain, G-beta repeat
    1.6e-23   83.0   0.2    2.6e-23   82.4   0.2    1.3  1  Utp12          Dip2/Utp12 Family
    8.5e-21   74.1   0.0     0.0082   16.4   0.0    9.9 11  ANAPC4_WD40    Anaphase-promoting complex subunit 4 WD40 doma
    1.3e-07   30.9   0.9       0.18   10.7   0.1    5.2  5  Ge1_WD40       WD40 region of Ge1, enhancer of mRNA-decapping
    0.00014   21.3   0.0        0.4   10.0   0.0    4.3  5  WD40_like      WD40-like domain
  ------ inclusion threshold ------
      0.024   14.4   0.0      0.057   13.2   0.0    1.6  1  TAXi_C         Xylanase inhibitor C-terminal
      0.027   13.0   0.0       0.84    8.1   0.0    2.9  3  Cytochrom_D1   Cytochrome D1 heme domain
      0.072   12.6   1.1      0.091   12.2   0.3    1.5  2  Utp21          Utp21 specific WD40 associated putative domain
      0.073   13.6   0.1         23    5.6   0.2    3.4  3  PQQ_3          PQQ-like domain
       0.41    9.3   4.4        8.8    4.9   0.2    3.9  5  Nucleoporin_N  Nup133 N terminal like


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       6.7   1.2e+04      17      27 ..      21      31 ..      12      35 .. 0.77
   2 !    6.8   0.0    0.0076        14       3      33 ..      46      78 ..      44      81 .. 0.87
   3 !    8.2   0.1    0.0028         5       6      28 ..      94     114 ..      90     122 .. 0.80
   4 !   16.6   2.0   5.9e-06     0.011       6      38 .]     146     179 ..     142     179 .. 0.88
   5 ?    1.2   0.0      0.43   7.8e+02       6      34 ..     190     219 ..     187     222 .. 0.81
   6 ?    2.4   0.0      0.18   3.3e+02      13      32 ..     265     284 ..     253     289 .. 0.77
   7 ?   -0.1   0.1       1.1     2e+03       4      37 ..     297     332 ..     294     333 .. 0.64
   8 !   26.6   0.1   4.3e-09   7.6e-06       8      38 .]     344     375 ..     336     375 .. 0.88
   9 !   24.8   0.3   1.5e-08   2.8e-05       3      38 .]     381     417 ..     379     417 .. 0.94
  10 !    7.9   0.1    0.0033       5.9       3      37 ..     423     460 ..     421     461 .. 0.80
  11 !   34.2   0.6   1.7e-11   3.1e-08       1      38 []     465     503 ..     465     503 .. 0.94
  12 !    6.8   0.0    0.0077        14      12      37 ..     519     544 ..     509     544 .. 0.90
  13 ?    0.6   0.0      0.69   1.2e+03      16      37 ..     585     606 ..     575     607 .. 0.74
  14 ?   -1.5   0.0       3.2   5.8e+03      13      29 ..     683     699 ..     676     703 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 6.7
                EEETTSSEEEE CS
        WD40 17 afspdgawlas 27
                 f+pdg+ l+s
  KHJ34423.1 21 LFDPDGTCLFS 31
                49999998865 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0076
                EEEEEE.SS.SSEEEEEEETTSSEEEEEETTSE CS
        WD40  3 clrtlt.GH.ssvtslafspdgawlasGsdDgt 33
                +++tl  +H +++t ++  p g++l+s ++Dg 
  KHJ34423.1 46 KTHTLPfAHrKNITRIDLTPRGNLLLSVDEDGR 78
                67888779*999**************9898985 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0028
                 EEESSSSEEEEEEETTSSEEEEE CS
        WD40   6 tltGHssvtslafspdgawlasG 28 
                 +++G   vt+lafsp+g+ +a G
  KHJ34423.1  94 SFRGT--VTALAFSPSGRHFAVG 114
                 56666..************9876 PP

  == domain 4  score: 16.6 bits;  conditional E-value: 5.9e-06
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +  GH + v s+ +s+d+++++s+ +D t riW+
  KHJ34423.1 146 IHAGHyDTVQSIHWSSDSRFFLSAAKDLTARIWS 179
                 3459*888*************************5 PP

  == domain 5  score: 1.2 bits;  conditional E-value: 0.43
                 EEESS.SSEEEEEEETTSSEEEEEETTSEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtv 34 
                 tl+GH  +v +  fs+d+  l + s+Dg v
  KHJ34423.1 190 TLSGHrEGVIAAYFSQDQEKLYTISKDGAV 219
                 899**9888788899999999876888877 PP

  == domain 6  score: 2.4 bits;  conditional E-value: 0.18
                 EEEEEEETTSSEEEEE.ETTS CS
        WD40  13 vtslafspdgawlasG.sdDg 32 
                 v + af++++++l++G s +g
  KHJ34423.1 265 VKCSAFHSSSNLLVAGfS-NG 284
                 88889**********944.65 PP

  == domain 7  score: -0.1 bits;  conditional E-value: 1.1
                 EEEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasG.sdDgtvriW 37 
                 +++l+   +++  +  ++ g wla G s+ g + +W
  KHJ34423.1 297 IHSLSISqNDIDFVTINKTGEWLAFGsSKLGQLLVW 332
                 5666533356656669999***98663566666666 PP

  == domain 8  score: 26.6 bits;  conditional E-value: 4.3e-09
                 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  GH +s++sl +spd++ +++  dDg++++Wd
  KHJ34423.1 344 QGHfDSINSLVYSPDSKRIITTADDGKIKVWD 375
                 4**888**************9999*******9 PP

  == domain 9  score: 24.8 bits;  conditional E-value: 1.5e-08
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 c+ t+t H s+vt++ fs  g+ l+++s Dg++r Wd
  KHJ34423.1 381 CIVTFTEHsSGVTACEFSNKGNVLFTSSLDGSIRAWD 417
                 899*****777*************************9 PP

  == domain 10  score: 7.9 bits;  conditional E-value: 0.0033
                 EEEEEESSSS..EEEEEEETTSSEEEEEE.TTSEEEEE CS
        WD40   3 clrtltGHss..vtslafspdgawlasGs.dDgtvriW 37 
                 + rt+t+ +    ++la++p+g  +++Gs d   +++W
  KHJ34423.1 423 NFRTFTAANRlsFSCLAVDPSGEVVCAGSiDSFDIYVW 460
                 56788877553348**************9888888888 PP

  == domain 11  score: 34.2 bits;  conditional E-value: 1.7e-11
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 gq+l  l+GH ++v+sl+f p+g  ++sGs+D+tvr+W+
  KHJ34423.1 465 GQLLDRLSGHeGPVSSLSFAPSGGTVVSGSWDHTVRVWS 503
                 5788899***999*************************5 PP

  == domain 12  score: 6.8 bits;  conditional E-value: 0.0077
                 SEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvriW 37 
                 +v ++af pd++ +a ++ Dg + +W
  KHJ34423.1 519 DVLDVAFRPDSKQIAVSTLDGQITFW 544
                 5899**********99999****999 PP

  == domain 13  score: 0.6 bits;  conditional E-value: 0.69
                 EEEETTSSEEEEEETTSEEEEE CS
        WD40  16 lafspdgawlasGsdDgtvriW 37 
                 +++s dg+ l++G+  + + ++
  KHJ34423.1 585 IRYSVDGTCLLAGGNSKYICLY 606
                 4466699999999988877776 PP

  == domain 14  score: -1.5 bits;  conditional E-value: 3.2
                 EEEEEEETTSSEEEEEE CS
        WD40  13 vtslafspdgawlasGs 29 
                 v++laf p+g  ++++s
  KHJ34423.1 683 VSGLAFAPNGEAFCAAS 699
                 789*******9877665 PP

>> Utp12  Dip2/Utp12 Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.4   0.2   1.4e-26   2.6e-23       1     107 []     749     854 ..     749     854 .. 0.97

  Alignments for each domain:
  == domain 1  score: 82.4 bits;  conditional E-value: 1.4e-26
                 HHHHHHH.HHHSS-TTTHHHHHHCS-CTCHHHHHHHHHHHH.HTTTTHHHHHHHHHHHHHHHHHHHHHSH.HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Utp12   1 ndeelleevlekippsdirltvlrLpssyvlkLLeflaerlaeksphlelllrwlkallrvHgsylvaspsdlvpaLrslqkslrerlktlskllglnl 99 
                 n+ +l+++v+e+ip+s+i+l+v+ Lp++y+ +LL+f+   + e+sphle++l wl+a+l +Hgs+++++++++++++r + +++++  ++++kl+++n 
  KHJ34423.1 749 NESSLIRRVFERIPHSTISLIVKELPLVYLSRLLKFVGMQT-EESPHLEFCLLWLEAILASHGSWIRENRGAMESEIRIVSSAVSKIREEMRKLADENC 846
                 899************************************66.*************************99997879************************ PP

                 HHHHHHHH CS
       Utp12 100 grLdylls 107
                 + +dylls
  KHJ34423.1 847 FLIDYLLS 854
                 *****986 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0      0.01        18      35      89 ..      52     104 ..      33     106 .. 0.82
   2 ?    3.0   0.0     0.068   1.2e+02      39      59 ..      97     117 ..      94     123 .. 0.90
   3 !    6.2   0.0    0.0073        13      38      71 ..     151     184 ..     142     204 .. 0.83
   4 !    8.7   0.0    0.0012       2.1      36      84 ..     260     307 ..     248     337 .. 0.88
   5 !   16.4   0.0   4.6e-06    0.0082      32      89 ..     334     397 ..     319     400 .. 0.83
   6 !    5.8   0.0    0.0092        17      36      87 ..     387     438 ..     385     441 .. 0.88
   7 ?    4.7   0.0     0.021        39      36      89 ..     430     483 ..     417     486 .. 0.85
   8 ?    2.2   0.0      0.13   2.2e+02      35      66 ..     472     503 ..     457     506 .. 0.80
   9 !    9.9   0.0    0.0005       0.9      28      70 ..     500     549 ..     494     561 .. 0.84
  10 ?    2.0   0.0      0.15   2.7e+02      35      79 ..     576     620 ..     563     626 .. 0.84
  11 ?    2.8   0.0     0.079   1.4e+02      37      67 ..     679     708 ..     672     723 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.01
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                   ++ ++++ +   p g+lL  + +dg+  l ++     +h +s   +  vt l +
   KHJ34423.1  52 FAHRKNITRIDLTPRGNLLLSVDEDGRAILTNIPRRIALHRFSFRGT--VTALAF 104
                  567889***************************99999999998876..777765 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.068
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysd 59 
                  ++v++La++p+g+ +av++ +
   KHJ34423.1  97 GTVTALAFSPSGRHFAVGIGN 117
                  589**************9865 PP

  == domain 3  score: 6.2 bits;  conditional E-value: 0.0073
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgk 71 
                    +v+s++W+ d +++  a +d + r+ +  +++
   KHJ34423.1 151 YDTVQSIHWSSDSRFFLSAAKDLTARIWSLDKEE 184
                  5689******************999998876654 PP

  == domain 4  score: 8.7 bits;  conditional E-value: 0.0012
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekav 84 
                  +++ +v++ a++ + +lL+ ++s+g   l+++ + + +hsls+++++ +
   KHJ34423.1 260 ENNTKVKCSAFHSSSNLLVAGFSNGVFGLYEMPDFNKIHSLSISQND-I 307
                  68899*************************************99986.4 PP

  == domain 5  score: 16.4 bits;  conditional E-value: 4.6e-06
  ANAPC4_WD40  32 l.......eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                          +++++  +++sL ++pd k +    +dg++++ d+++g ++ +++ +s+  vt  ++
   KHJ34423.1 334 WqsesyilKQQGHFDSINSLVYSPDSKRIITTADDGKIKVWDVKTGFCIVTFTEHSSG-VTACEF 397
                  3334444567788899************************************999884.777666 PP

  == domain 6  score: 5.8 bits;  conditional E-value: 0.0092
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  +++s v++ +++++g++L  +  dg++r  d    +  +++++++  + +cl
   KHJ34423.1 387 EHSSGVTACEFSNKGNVLFTSSLDGSIRAWDLIRYRNFRTFTAANRLSFSCL 438
                  567889************************9999999999998888877777 PP

  == domain 7  score: 4.7 bits;  conditional E-value: 0.021
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdg.evrlldaesgkvvhslsvksekavtclgW 89 
                  ++  + ++La  p+g++ + +  d+  + + ++++g+++  ls ++   v++l++
   KHJ34423.1 430 ANRLSFSCLAVDPSGEVVCAGSIDSfDIYVWSVQNGQLLDRLSGHEGP-VSSLSF 483
                  67777889999************9999***************999984.988877 PP

  == domain 8  score: 2.2 bits;  conditional E-value: 0.13
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlld 66 
                  +++++ v+sL++ p+g   + +  d +vr+ +
   KHJ34423.1 472 SGHEGPVSSLSFAPSGGTVVSGSWDHTVRVWS 503
                  678899*******************9999876 PP

  == domain 9  score: 9.9 bits;  conditional E-value: 0.0005
  ANAPC4_WD40  28 rvwtl.......eedkedsevrsLaWkpdgklLavaysdgevrlldaesg 70 
                  rvw++       e+ + +  v ++a++pd k +av++ dg++ +  ++++
   KHJ34423.1 500 RVWSIfgrtqtsESLQLQADVLDVAFRPDSKQIAVSTLDGQITFWAVSEA 549
                  7888888877666667788999********************99887765 PP

  == domain 10  score: 2.0 bits;  conditional E-value: 0.15
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvk 79 
                  ++  ++ + ++++ dg+ L  + +   + l+++e   ++++++v+
   KHJ34423.1 576 ASGTKSFTVIRYSVDGTCLLAGGNSKYICLYSVECLVLLKKFTVS 620
                  55667788999**********************998888888775 PP

  == domain 11  score: 2.8 bits;  conditional E-value: 0.079
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrllda 67 
                  ++ +v++La+ p+g+ ++ a  +g   +++ 
   KHJ34423.1 679 PEIRVSGLAFAPNGEAFCAASTEGL-LIYSL 708
                  566899************9998884.35555 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.15   2.7e+02     184     214 ..     191     222 ..     167     236 .. 0.75
   2 !    4.2   0.0    0.0097        17     178     216 ..     337     376 ..     320     379 .. 0.81
   3 !   10.7   0.1    0.0001      0.18     170     216 ..     369     418 ..     362     426 .. 0.79
   4 ?    1.0   0.0     0.091   1.6e+02     187     222 ..     474     510 ..     454     517 .. 0.80
   5 !    9.1   0.0   0.00031      0.56     187     218 ..     517     548 ..     508     555 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.15
    Ge1_WD40 184 ieehs.liveaafspdGtalatasedGevkff 214
                 ++ h   ++ a fs d   l t s+dG v  +
  KHJ34423.1 191 LSGHReGVIAAYFSQDQEKLYTISKDGAVFNW 222
                 4555436999*****************99554 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0097
    Ge1_WD40 178 eegllkieehs.liveaafspdGtalatasedGevkffqv 216
                 e+ +lk + h   i + ++spd   + t++ dG++k + v
  KHJ34423.1 337 ESYILKQQGHFdSINSLVYSPDSKRIITTADDGKIKVWDV 376
                 455666666744899999********************98 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 0.0001
    Ge1_WD40 170 gelsveeiee..gllkieehs.liveaafspdGtalatasedGevkffqv 216
                 g+++v ++++   ++ ++ehs  ++   fs  G +l t+s dG ++ + +
  KHJ34423.1 369 GKIKVWDVKTgfCIVTFTEHSsGVTACEFSNKGNVLFTSSLDGSIRAWDL 418
                 56666677762245788899758999********************9976 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.091
    Ge1_WD40 187 hs.liveaafspdGtalatasedGevkffqvyledee 222
                 h   +++ +f+p G ++   s d +v+ + ++   ++
  KHJ34423.1 474 HEgPVSSLSFAPSGGTVVSGSWDHTVRVWSIFGRTQT 510
                 4436788899********************9976654 PP

  == domain 5  score: 9.1 bits;  conditional E-value: 0.00031
    Ge1_WD40 187 hsliveaafspdGtalatasedGevkffqvyl 218
                 ++ + + af pd   +a+++ dG++ f+ v  
  KHJ34423.1 517 QADVLDVAFRPDSKQIAVSTLDGQITFWAVSE 548
                 5679999*********************9965 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.64   1.1e+03     133     198 ..      28      98 ..      23     118 .. 0.73
   2 ?    0.6   0.0      0.16   2.8e+02       3      87 ..     154     242 ..     152     291 .. 0.80
   3 !   10.0   0.0   0.00022       0.4       3      83 ..     350     431 ..     348     462 .. 0.84
   4 ?    3.7   0.0     0.018        32       4      70 ..     479     546 ..     476     571 .. 0.83
   5 ?   -1.2   0.0      0.54   9.7e+02       6      34 ..     585     613 ..     582     624 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.64
   WD40_like 133 kiysLsesafivfdlfsqnieyk..isvkdiktfeiienkdilligtegeililkk...nvilqkidvegk 198
                  ++s + ++  +fdl ++++++    + k+i+ ++ ++  ++ll   e+   il +    + l+++++ g+
  KHJ34423.1  28 CLFSPVGNRVTIFDLVNNKTHTLpfAHRKNITRIDLTPRGNLLLSVDEDGRAILTNiprRIALHRFSFRGT 98 
                 57888889999999999988875336888999999999999988777766666543222667777777765 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.16
   WD40_like   3 iYsidiskkgslilyGgkddkctvlklesle..svsivesfedSvifvkllddd.lilvvtlDGtillsllenee.evenekieedist 87 
                 + si  s ++ ++l  +kd ++++ +l+ +e  + + + + ++ vi + + +d+ ++   + DG++ +  +  +  ++++   +edi  
  KHJ34423.1 154 VQSIHWSSDSRFFLSAAKDLTARIWSLDKEEgfVPTTLSGHREGVIAAYFSQDQeKLYTISKDGAVFNWAFLPDVsSTKKSLDDEDIDN 242
                 66899999****************999877622568899999****9999877658888999**9977666655534444444566655 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00022
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvklldd.dlilvvtlDGtillslleneeevenekiee 83 
                 i s+ +s++++ i+  ++d k++v +++++  +  +++ +  v  +++ ++ +++   +lDG i   +l    + ++    +
  KHJ34423.1 350 INSLVYSPDSKRIITTADDGKIKVWDVKTGFCIVTFTEHSSGVTACEFSNKgNVLFTSSLDGSIRAWDLIRYRNFRTFTAAN 431
                 56778999****************************************87516888999*****988887766555555555 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.018
   WD40_like   4 YsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvkllddd.lilvvtlDGtillsll 70 
                  s+ + + g  ++ G+ d++++v ++   ++ s   +++  v+ v +  d  +i v tlDG+i+   +
  KHJ34423.1 479 SSLSFAPSGGTVVSGSWDHTVRVWSIFGRTQTSESLQLQADVLDVAFRPDSkQIAVSTLDGQITFWAV 546
                 5778888999999*****************999999***********977758999*******65544 PP

  == domain 5  score: -1.2 bits;  conditional E-value: 0.54
   WD40_like   6 idiskkgslilyGgkddkctvlklesles 34 
                 i +s +g+ +l Gg+++ + ++++e l +
  KHJ34423.1 585 IRYSVDGTCLLAGGNSKYICLYSVECLVL 613
                 56788899999999999999999987654 PP

>> TAXi_C  Xylanase inhibitor C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   3.2e-05     0.057      87     145 ..     232     293 ..     199     298 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 3.2e-05
                 ..-S----EEEEESSS-EEEE-GGGGEEE-SSSEEEE-EEE-...-S--SSSEEE-HHHHBT CS
      TAXi_C  87 ragpavPtitlvleggaewtisgenllvkveggvvClafves...gvagesavviGglqled 145
                 + + +  +i+   e++++w+i+++ ++++++ +v C af +s    vag s+ v+G + + d
  KHJ34423.1 232 KKSLDDEDIDNATENNSRWRIKQRHYFMENNTKVKCSAFHSSsnlLVAGFSNGVFGLYEMPD 293
                 45555556777788999*************************88888999999999998876 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.17   3.1e+02     173     203 ..     154     185 ..      95     196 .. 0.69
   2 ?    0.0   0.0      0.13   2.4e+02      39      59 ..     199     219 ..     189     250 .. 0.89
   3 ?    8.1   0.0   0.00047      0.84     284     344 ..     364     417 ..     348     446 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.17
                   EEEEEE-TTSSEEEEEEGGGT.EEEEEETTTT CS
  Cytochrom_D1 173 lhDggldpdkRYflaaanaed.kvavvdtkeg 203
                   ++   +++d R+fl+aa     ++ ++d++eg
    KHJ34423.1 154 VQSIHWSSDSRFFLSAAKDLTaRIWSLDKEEG 185
                   34556788888888876654346666666655 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.13
                   EEEE-TT.SSEEEEEETTSEE CS
  Cytochrom_D1  39 isrvfasdgRyvyvigRDgkv 59 
                   i+  f++d+  +y+i++Dg v
    KHJ34423.1 199 IAAYFSQDQEKLYTISKDGAV 219
                   6778***************87 PP

  == domain 3  score: 8.1 bits;  conditional E-value: 0.00047
                   EE-TT-SSHT-EEEEETTBT-EEE-HHHHHT--EEEEEE-TTSSEEEEEEE--SSEEEEEE CS
  Cytochrom_D1 284 vdaflnpdndsvaviDkktlekvltlaesaglkvvhvEfnkdGdevwlSvwdgkdalvvyD 344
                   +      d+++++v+D kt + + t  e++   v+  Ef+++G+ ++ S  dg   +  +D
    KHJ34423.1 364 TT----ADDGKIKVWDVKTGFCIVTFTEHSS-GVTACEFSNKGNVLFTSSLDGS--IRAWD 417
                   43....6899*********999999888777.7***********9999999887..55555 PP

>> Utp21  Utp21 specific WD40 associated putative domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       3.4   6.1e+03      67     104 ..     224     261 ..     223     316 .. 0.51
   2 ?   12.2   0.3   5.1e-05     0.091     131     232 ..     756     852 ..     727     853 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 3.4
                 XXXXXXXXXXXXXXXX.XXXXX-HHHHHHHHTT----- CS
       Utp21  67 FLptlaglegkfasekedeeseedeeeeeeeesrilkl 104
                 FLp +++++++ ++e+ d+++e++++ + ++++ +++ 
  KHJ34423.1 224 FLPDVSSTKKSLDDEDIDNATENNSRWRIKQRHYFMEN 261
                 66666666665555543333333333333333333333 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 5.1e-05
                 HHHHH-S-HHHHHT--------S-SHHHHHHHHHHHHHTTTS-HHHHHHHHHHHHHHTTTTTTT-SH..HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Utp21 131 eyLkslspsaidleirsLesaesleelvafvkaltarLksrrdfeLvqailsvfLkvHgdviaeeeeeelkealeelkeeqeeewerldelvkyclgvv 229
                 +++  ++ s+i l ++ L    +l  l+ ++k++  + ++  + e++  +l+ +L  Hg+ i e++  +++++++ ++++ ++ +e++++l +++  ++
  KHJ34423.1 756 RVFERIPHSTISLIVKEL----PLVYLSRLLKFVGMQTEESPHLEFCLLWLEAILASHGSWIRENRG-AMESEIRIVSSAVSKIREEMRKLADENCFLI 849
                 556677788888888888....8888999999999999****************************7.9*****************************9 PP

                 HHH CS
       Utp21 230 gfl 232
                 ++l
  KHJ34423.1 850 DYL 852
                 997 PP

>> PQQ_3  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       5.6     1e+04      23      40 .]     361     378 ..     343     378 .. 0.64
   2 ?    3.5   0.0     0.058     1e+02      21      37 ..     401     417 ..     386     418 .. 0.87
   3 ?    5.6   0.2     0.013        23      11      34 ..     476     500 ..     459     503 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 5.6
       PQQ_3  23 lvyvgtgdGtlyAlDaet 40 
                 ++ ++++dG++   D +t
  KHJ34423.1 361 RIITTADDGKIKVWDVKT 378
                 566667788887777665 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.058
       PQQ_3  21 gglvyvgtgdGtlyAlD 37 
                 g+++++++ dG+++A D
  KHJ34423.1 401 GNVLFTSSLDGSIRAWD 417
                 89999*999******99 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.013
       PQQ_3  11 gpvnssp..avdgglvyvgtgdGtly 34 
                 gpv ss+  a +gg+v+ g++d+t++
  KHJ34423.1 476 GPV-SSLsfAPSGGTVVSGSWDHTVR 500
                 466.77766668************97 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0      0.27   4.8e+02     189     235 ..     185     229 ..     148     304 .. 0.70
   2 ?    4.9   0.2    0.0049       8.8     202     231 ..     348     377 ..     263     388 .. 0.87
   3 ?    0.5   0.0      0.11   1.9e+02     202     231 ..     390     419 ..     381     432 .. 0.81
   4 ?    0.6   0.1       0.1   1.8e+02     199     245 ..     473     520 ..     400     549 .. 0.62
   5 ?    1.5   0.1     0.054        97     175     231 ..     472     547 ..     432     609 .. 0.47

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.27
                    --SSS--G----GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCE CS
  Nucleoporin_N 189 silpgvlsgasereeivqlridssrrilytlsskgvirvydlsasng 235
                    +++p  ls    re +++   ++ ++ lyt+s +g +  + + ++ +
     KHJ34423.1 185 GFVPTTLS--GHREGVIAAYFSQDQEKLYTISKDGAVFNWAFLPDVS 229
                    67777777..7777788888888888899999999888888775533 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0049
                    G-EEEEEEECCTCEEEEEETTSEEEEEEEE CS
  Nucleoporin_N 202 eeivqlridssrrilytlsskgvirvydls 231
                    ++i +l+ ++ +++++t   +g+i+v+d+ 
     KHJ34423.1 348 DSINSLVYSPDSKRIITTADDGKIKVWDVK 377
                    7899999*********************98 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.11
                    G-EEEEEEECCTCEEEEEETTSEEEEEEEE CS
  Nucleoporin_N 202 eeivqlridssrrilytlsskgvirvydls 231
                    + +++ + +++ + l+t s +g ir++dl 
     KHJ34423.1 390 SGVTACEFSNKGNVLFTSSLDGSIRAWDLI 419
                    5666667777779***************97 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.1
                    --GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCE.E-EEEEEEEH CS
  Nucleoporin_N 199 sereeivqlridssrrilytlsskgvirvydlsasng.esslksdidi 245
                      + ++ +l   +s + +++ s ++++rv+ +  + + + sl  ++d+
     KHJ34423.1 473 GHEGPVSSLSFAPSGGTVVSGSWDHTVRVWSIFGRTQtSESLQLQADV 520
                    345566666666777777777777777777777554444555555555 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 0.054
                    EEEEE-SSSS-.......--SSS--G................----GG-EEEEEEECCTCEEEEEETTSEEEEEEEE CS
  Nucleoporin_N 175 kkicltkgglssll....silpgvls................gasereeivqlridssrrilytlsskgvirvydls 231
                    + +  + ++ls +      +++g +                 +   + ++  ++  + ++ + + + +g i ++ +s
     KHJ34423.1 472 SGHEGPVSSLS-FApsggTVVSGSWDhtvrvwsifgrtqtseSLQLQADVLDVAFRPDSKQIAVSTLDGQITFWAVS 547
                    44444444333.11222222222222222233333344444444444445555555555666666666666666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (897 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.74u 0.30s 00:00:01.04 Elapsed: 00:00:00.47
# Mc/sec: 5730.71
//
Query:       KHJ34424.1  [L=162]
Description: putative pyruvate dehydrogenase kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.8e-33  114.3   0.0      6e-33  114.0   0.0    1.0  1  BCDHK_Adom3  Mitochondrial branched-chain alpha-ketoacid dehy


Domain annotation for each model (and alignments):
>> BCDHK_Adom3  Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.0   0.0   3.4e-37     6e-33       1     128 [.      22     146 ..      22     149 .. 0.95

  Alignments for each domain:
  == domain 1  score: 114.0 bits;  conditional E-value: 3.4e-37
  BCDHK_Adom3   1 pvslrqlvqfgekpstgtllksaqflreelpirlAhrvkelenlPdglvenpsvkkvkdwYaqsfeellelpkp.eleenekftelLekikkrHddvv 97 
                  pvs++ql  fg++++++ +++sa+++++elp+rlAhr++++++lP+ +v np++++v+++Y+++fe ++ + +  +l++n+++++ +++++++H +v+
   KHJ34424.1  22 PVSIKQLEVFGRHLTESRIIDSAKYVQTELPTRLAHRIRDMQTLPYVVVANPHISQVYELYYKAFEAIRGIGEIkNLNDNQRLCKKISETLHEHLTVI 119
                  79************9999*****************************************************99867********************** PP

  BCDHK_Adom3  98 ttlaqGvlelkekrkrkqidseiqsFLdrfy 128
                  ++l++G+le+++     +  ++++sF+++++
   KHJ34424.1 120 PKLTMGILECRDL----MRPEDMDSFMNTIL 146
                  ***********77....56788999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       625  (0.0348597); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1211.54
//
Query:       KHJ34425.1  [L=398]
Description: putative cysteine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-66  225.1   0.0    1.5e-66  224.9   0.0    1.0  1  PALP      Pyridoxal-phosphate dependent enzyme


Domain annotation for each model (and alignments):
>> PALP  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.9   0.0   8.1e-71   1.5e-66       2     294 .]      61     363 ..      60     363 .. 0.95

  Alignments for each domain:
  == domain 1  score: 224.9 bits;  conditional E-value: 8.1e-71
                 GGCSSS--EEEECCTCCCCCCEEEEEEGGGSTTSBTTHHHHHHHHHH.HHTT..TTTSEEEEEBSSHHHHHHHHHHHHHT-EEEEEEETTS-HHHHHHH CS
        PALP   2 tlgigpTPlvrlprlskelgvplflKlEslnptgSfKdRgaeyllar.lkeg..tgaktvveassGNhgralAaaaallGlkvtivvpadaspekvall 97 
                 t +ig+TPl+rl+r+s+ +g++++ K E++np+gS+KdR+a yl+ + +++g  +++ tvve+++GN+g++lA++++++G++++i+vp++ s++k+ ll
  KHJ34425.1  61 THAIGNTPLIRLKRISDTTGCEVLGKAEFMNPGGSVKDRAALYLVRDgEERGllKAGGTVVEGTAGNTGIGLAHVCRAMGYQLVIYVPDTQSEGKINLL 159
                 679********************************************766669999******************************************* PP

                 HHTT-EEEEE.......CCHHHHHHHH.HHHHHHHSTTCEE--TTTSHHHHHH.HHTHHHHHHHHTTTTEEEEEEE-SSSHHHHHHHHHHHH.HSTT-E CS
        PALP  98 rllGaevvev.......ggdydeavaa.aaelaaegegaylvsqfdnptvieg.ygtiglEileqlggkpdavvvpvGgGgliaGiaaglke.rrpdvr 186
                 rllGa+v  v       +++y++ +++ a++l ++g++ ++++qfdn+++  +  +t+g+Ei+ q+ gk+da+ +++G+Gg++aG+ ++lk  +++ vr
  KHJ34425.1 160 RLLGAQVFPVpavaynhPRNYNHLAKLhAQRLHENGKSGFWTDQFDNVANRRAhLETTGPEIWHQTSGKIDAFTCATGTGGTLAGTTRYLKTvSKGRVR 258
                 **********99999988889999999999**************************************************************99999** PP

                 EEEEEECTTCGGTTCCS..S.SS..B.SSS.CCSTCSCGTTCCHHHHSEEEEEEEEEEHHHHHHHHHHHHHHHSB-B-HHHHHHHHHHHHHHHHCCTTC CS
        PALP 187 vigvepegsdalarslragrrvtvpvsdtiadglavgspselafelldrlvdeivtvsdeealeamrllarregivvepssaaalaalklreagelkeg 285
                 ++ ++p   + l ++lr g  ++  ++++i +g++ g+ +    + +d l+d    +sde  +e++ +   +eg+ ++ ss  ++ a+  + a++l++g
  KHJ34425.1 259 CYLADPP-GSILDSYLRSGGKLSERTGSSITEGIGQGRITCNLSKDID-LLDGSLYISDEKSVEMIYRCLDEEGLYLGASSTLNVVAA-KEVAERLGPG 354
                 ******8.7889999999*******************77777777774.5666999********************************.********** PP

                 EEEEEEE-B CS
        PALP 286 drvvviltg 294
                  +vv+il++
  KHJ34425.1 355 HTVVTILCD 363
                 *******97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       377  (0.0210274); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2868.01
//
Query:       KHJ34426.1  [L=210]
Description: putative endosomal cargo receptor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.9e-46  157.7   3.8    3.4e-46  157.5   3.8    1.0  1  EMP24_GP25L  emp24/gp25L/p24 family/GOLD


Domain annotation for each model (and alignments):
>> EMP24_GP25L  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.5   3.8   1.9e-50   3.4e-46       1     182 []      22     203 ..      22     203 .. 0.93

  Alignments for each domain:
  == domain 1  score: 157.5 bits;  conditional E-value: 1.9e-50
  EMP24_GP25L   1 altfklpageekCfyeelkk.gtlltgsyqvtdggaaldvdlsvkdpdgngerlvkkkdresegdfsftakesgeykvCfdnsfstksskkvsfdiev 97 
                  alt+k+ a+e  Cfy ++k  g+++++++ v++g  ++d+d++v+   +n++++++   +e++gdf fta+e g+y++Cf+n+ st+++k v+f+i v
   KHJ34426.1  22 ALTYKIAANENACFYATVKNkGAKVAFYFAVQSGA-SFDIDYDVT--GPNKKVIMNG-AKERQGDFVFTANEIGDYEFCFSNRISTFTEKVVDFEIAV 115
                  699***************888**************.9********..8878******.888889********************************** PP

  EMP24_GP25L  98 gseasd.ykdsak..kekletleselkkleekldsikreqkylrereerlrdtnestnsrvvwwsilqllvlvlvavlqvyyLkrfFk 182
                  ++e++  + + +    e+ + le+++ kl+++l+ i r+qky r+re+r+  t+ st++r++++s+++ l+++++a+lqv++++ fF+
   KHJ34426.1 116 ENEERAtIPNLQNvaPEQTSALEESVIKLSSQLSTIARNQKYFRTRENRNFSTVRSTERRIFNFSVMESLLIICMAGLQVFIVRFFFQ 203
                  86655564444445556779*******************************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       926  (0.0516482); expected 358.6 (0.02)
Passed bias filter:                      621  (0.0346366); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1581.98
//
Query:       KHJ34427.1  [L=834]
Description: putative dna repair helicase rad25 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   5.9e-121  402.3   1.4   1.2e-120  401.4   1.4    1.5  1  ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
    3.5e-34  117.7   0.0    7.3e-34  116.6   0.0    1.6  1  Helicase_C_3   Helicase conserved C-terminal domain
    1.5e-16   60.9   0.0    4.2e-16   59.4   0.0    1.8  1  ResIII         Type III restriction enzyme, res subunit
    1.3e-13   51.3   0.3    4.1e-13   49.6   0.3    2.0  1  Helicase_C     Helicase conserved C-terminal domain
    6.4e-08   31.7   0.0    7.9e-08   31.4   0.0    1.2  1  SNF2_N         SNF2 family N-terminal domain
  ------ inclusion threshold ------
      0.044   12.8   0.0      0.073   12.1   0.0    1.3  1  HMG-CoA_red    Hydroxymethylglutaryl-coenzyme A reductase
      0.063   12.7   0.0         12    5.3   0.0    2.5  2  SBP_bac_6      Bacterial extracellular solute-binding protein


Domain annotation for each model (and alignments):
>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  401.4   1.4  4.5e-124  1.2e-120       1     236 [.     523     757 ..     523     775 .. 0.95

  Alignments for each domain:
  == domain 1  score: 401.4 bits;  conditional E-value: 4.5e-124
  ERCC3_RAD25_C   1 LqekgylakvqcaevWcpmtaefykeylkakskkkkllyvmnpnkfracefLikyhekrgDkiivfsDnvfaLkeyakklkkpyiyGetseaerlk 96 
                    L+e+g++a+vqcaevWcpmt+efy+eyl+  ++k++ll++mnp+kf+ac+fLi+yhekrgDkiivfsDn++aL++ya+kl+k +i+Gets+aerl+
     KHJ34427.1 523 LAEQGHIARVQCAEVWCPMTTEFYTEYLRLPKAKQSLLWIMNPRKFQACQFLIDYHEKRGDKIIVFSDNIYALTAYATKLRKVFIHGETSNAERLR 618
                    789********************************************************************************************* PP

  ERCC3_RAD25_C  97 ilqkfkknpkvntiflskvgDtsiDlPeanvliqisshfgsrrqeaqrlGriLrakkksneeefnaffYsLvskDtkemaystkrqqflvdqGYaf 192
                    il++f++n++vnt+flsk+gDts+DlPea++liqisshfgsrrqeaqrlGriLrak++ n+e+fnaffYsLvskDt+em+ys+krq+flvdqGYaf
     KHJ34427.1 619 ILENFQHNDQVNTLFLSKIGDTSLDLPEATCLIQISSHFGSRRQEAQRLGRILRAKRR-NDEGFNAFFYSLVSKDTQEMVYSSKRQAFLVDQGYAF 713
                    **********************************************************.9************************************ PP

  ERCC3_RAD25_C 193 kviteleeleeeeelaystkeeqkellqkvlaakdeeaeeeele 236
                    kvit+l+++ee ++la+++++e++ellq++l + +++++++ ++
     KHJ34427.1 714 KVITHLQGIEELPDLAFKSSNERRELLQNILIHYETDTSKDYED 757
                    *******************************9988877665443 PP

>> Helicase_C_3  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.6   0.0   2.9e-37   7.3e-34       6     124 ..     110     229 ..     104     232 .. 0.96

  Alignments for each domain:
  == domain 1  score: 116.6 bits;  conditional E-value: 2.9e-37
  Helicase_C_3   6 DltillegdsplaeearaaLaafAelesrpehahtyrltplSlrrAldaGltaeeiiefLerlskypvPqaleylirdvarryGklrlgl.easlvl 101
                    ++i+le + pla +a+++L+++Ae++srp+++h+y ltp+Sl++A+++Gl+  +ii++L+rlsk+p+P+a++++i+ ++++yGk++l+l +++ ++
    KHJ34427.1 110 KGNIILESFLPLASHAQDFLTTVAEPQSRPQFLHEYSLTPHSLYAAVSVGLDPPDIINVLNRLSKMPIPDAIKEFINGCTQSYGKVKLVLkNNKHFV 206
                   679********************************************************************************************** PP

  Helicase_C_3 102 rsddpalleelladkkiaklllr 124
                   +s+dp++l++ll+++ i++++++
    KHJ34427.1 207 ESSDPNMLQRLLKNPVINSCRVQ 229
                   ********************986 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.0   1.6e-19   4.2e-16       3     169 ..     341     497 ..     339     499 .. 0.85

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 1.6e-19
                 EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--..... CS
      ResIII   3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekds 101
                 ++r+yQe+ + ++  +    r k gli++++G+GKTlv + ++  ++k      +++l+ +   + q+++ef k+++ + ++i  ++s++k+k+    +
  KHJ34427.1 341 QIRPYQEKSLSKMFGN---GRAKSGLIVLPCGAGKTLVGITAACTIKK-----GAIILCTSSMSVVQWRQEFLKWSNINPNDIAVFTSDNKDKF----T 427
                 6899***999999744...6899****************999999988.....6899999999999********99999887777777777777....* PP

                 ..-SEEEEEHHHHHHTH..........HHHTTT-S.EEEEETGGGTTS.TTTHHHHHT---SEEEEEESS- CS
      ResIII 102 tnkkilvttiqsldadseee..eeeseellrdrfd.viiiDEaHrlgakkswreilekfkeavllglTATp 169
                  n+ i+vtt++++ ++ ++   +++  ++l++r+  ++i DE+H + a + +r++   +k   +lglTAT+
  KHJ34427.1 428 GNTGIIVTTYNMVAQKGKRSydSQKMMDFLQGREWgLMILDEVHVAPA-HMFRRVTSIIKTHSKLGLTATL 497
                 *************99996657644444444444335************.*********************7 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.6   0.3   1.6e-16   4.1e-13       5     110 ..     570     673 ..     566     674 .. 0.86

  Alignments for each domain:
  == domain 1  score: 49.6 bits;  conditional E-value: 1.6e-16
                 HHHHHH.HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSSEEEESGGGTSSSTSTTESEEEESSSS.SSHHHH CS
  Helicase_C   5 allell.kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesdvLiatdvaerGidipkvnlVinfdlp.rnvtsy 100
                 a+  l+  +e++g+ki++f+ +i  l    +     +++ + +hge+++ er++ile+f+ +++++ L  ++++ +++d+p+++++i+++    + ++ 
  KHJ34427.1 570 ACQFLIdYHEKRGDKIIVFSDNIYALT--AYA---TKLRKVFIHGETSNAERLRILENFQhNDQVNTLFLSKIGDTSLDLPEATCLIQISSHfGSRRQE 663
                 5555557789**************994..666...45777899****************9677788***********************9994559*** PP

                 HHHHTTSSST CS
  Helicase_C 101 iqriGRtgRa 110
                  qr GR+ Ra
  KHJ34427.1 664 AQRLGRILRA 673
                 *********8 PP

>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.4   0.0   3.1e-11   7.9e-08      98     214 ..     376     496 ..      55     524 .. 0.78

  Alignments for each domain:
  == domain 1  score: 31.4 bits;  conditional E-value: 3.1e-11
                 -..........EEEE--H.HHHHHHHHHHHHH-TTS-EEE--SSHHHH-----------------EEEE-HHHHHHHT..........TTS-S-S-SEE CS
                 x..........xxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxx RF
      SNF2_N  98 p..........tLivvPa.slldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydvvittYdvlsreaelq....kkrsvlkqvewkrv 181
                 +          ++i++ +   + qW +e+ ++ +    ++ v ++++         ++k+  ++++++ttY++++++ +++    k ++ l+ +ew  +
  KHJ34427.1 376 GitaactikkgAIILCTSsMSVVQWRQEFLKWSNINPNDIAVFTSDN---------KDKFTGNTGIIVTTYNMVAQKGKRSydsqKMMDFLQGREWGLM 465
                 04444444444899999944578*********988887888887764.........46899**************9988889999************** PP

                 EES-GGGT--T.TSHHHHHHHH---S-EEEE-S- CS
                 xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 182 vlDEghtlkns.tskaaeavskLstsnrwiltGT 214
                 +lDE h    +  +++    s ++t+ ++ lt+T
  KHJ34427.1 466 ILDEVHVAPAHmFRRV---TSIIKTHSKLGLTAT 496
                 *****98766633333...333458888888888 PP

>> HMG-CoA_red  Hydroxymethylglutaryl-coenzyme A reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.9e-05     0.073     133     205 ..     735     811 ..     691     832 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.9e-05
                  CCT-EEEEEEEEE-....SSEEEEEEEEE-TTC--HHHHHHHHHHHHHHHHHHHTSEEEEEEE-S--GGGEEEEEEE CS
  HMG-CoA_red 133 srggglkdievvla....grlvvlrlkvdtgDAmGaNmvnkateaaaelieeefgeeellsilsNlctdkkasaina 205
                  +r   l++i ++ +    +++  ++  ++  D mG Nm  k+++++a +++e  g++++ +i+ N + +k  + + +
   KHJ34427.1 735 ERRELLQNILIHYEtdtsKDYEDVDDLFHRVDNMGKNMKKKGARRTAGMLSELAGGQDMAYIEQNKSMNKELKKKKE 811
                  5555555555544434445566677778889***********************************99998776655 PP

>> SBP_bac_6  Bacterial extracellular solute-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0    0.0045        12     173     218 ..     430     475 ..     420     491 .. 0.89
   2 ?    4.7   0.0    0.0069        18     101     195 ..     647     742 ..     624     747 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0045
   SBP_bac_6 173 dGalvspifmlvkkgkkkelakafidfllspevqailakaggvfPv 218
                  G +v ++ m+ +kgk++ + ++ +dfl ++e++ ++ ++  v+P+
  KHJ34427.1 430 TGIIVTTYNMVAQKGKRSYDSQKMMDFLQGREWGLMILDEVHVAPA 475
                 5999*****************************9999888888887 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0069
   SBP_bac_6 101 ealllalykdfg..edgvkkllrnlkanlhpaq.mvkaagslesgepavsvvpyffadilpekkkgknlkvvwPedGalvspifmlvkkgkkkelaka 195
                 +++l  +   fg   +++++l+r l+a+ ++ +  +    sl s++  ++ ++y +++++   ++g  +kv++  +G    p+ +++ +++++el++ 
  KHJ34427.1 647 ATCLIQISSHFGsrRQEAQRLGRILRAKRRNDEgFNAFFYSLVSKD--TQEMVYSSKRQAFLVDQGYAFKVITHLQGIEELPDLAFKSSNERRELLQN 742
                 56666777788877899****************76777899*****..**********************************9999999977777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (834 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1181  (0.0658709); expected 358.6 (0.02)
Passed bias filter:                      597  (0.033298); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.74u 0.29s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 5531.35
//
Query:       KHJ34428.1  [L=648]
Description: hypothetical protein EV44_g6085 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      6e-21   75.1   2.9      6e-21   75.1   2.9    2.4  2  Methyltransf_32  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.1   2.9   3.3e-25     6e-21       1     158 []     168     412 ..     168     412 .. 0.84
   2 ?   -3.6   0.1      0.54   9.7e+03      86      91 ..     548     553 ..     526     569 .. 0.44

  Alignments for each domain:
  == domain 1  score: 75.1 bits;  conditional E-value: 3.3e-25
  Methyltransf_32   1 kKlheverlaelvakllkel..akesgaltvvDvGaGkgYLsfvlalkeke.yklkvvgidakeelvekaekraeklgkkfnkrlsfaelsiee 91 
                      kK+heve++a+ v +l++++  ++ ++ ++ +D+G+G+ YL+++la+     y+ ++v+i+ k  ++++a++++   + ++++++   +++  +
       KHJ34428.1 168 KKIHEVENFAKYVVRLADDIaiHSGKEITHFIDFGSGQNYLGRALAS---PlYNKQIVAIENKGLNIKSAKNMDILAN-AAKREIVMRNKKLYR 257
                      8******************98777778889*****************...5599999999999888888887654444.222333333333222 PP

  Methyltransf_32  92 atssktltkkve.................................................................................. 103
                       ++   ++kk++                                                                                  
       KHJ34428.1 258 LQQ--LTSKKMKnltfdekmekieklqnqntshipvdlrpsreldaiytkqagkghiqylhheivdgdltniidqiehpkiklssatpiddqtl 349
                      221..2222222344566666************************************************************************* PP

  Methyltransf_32 104 .......aeeekeeqeekesvdvligLHaCdtltdtalrlale.keakllvlvpCCyhelaee 158
                              e +k +++ ++   ++++ H C++l+   ++  l+ k+++++++++CCy++l+e+
       KHJ34428.1 350 qspeeqiLEIDKFNSKPEDLNLMVVSIHSCGNLSHHGINSLLQnKKVRAIAIIGCCYNLLSER 412
                      ***999867777788888999***************************************985 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.54
  Methyltransf_32  86 elsiee 91 
                       +++++
       KHJ34428.1 548 SKNSSQ 553
                      111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (648 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1420  (0.0792013); expected 358.6 (0.02)
Passed bias filter:                      548  (0.030565); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 4414.07
//
Query:       KHJ34429.1  [L=176]
Description: putative mitochondrial import inner membrane translocase subunit tim22 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-41  140.3   7.0    3.9e-41  139.9   7.0    1.2  1  Tim17     Tim17/Tim22/Tim23/Pmp24 family
  ------ inclusion threshold ------
      0.044   13.9   4.6      0.068   13.3   1.6    2.0  2  DUF5518   Family of unknown function (DUF5518)
        0.8   10.1  11.9       0.18   12.2   1.0    3.6  3  Romo1     Reactive mitochondrial oxygen species modulator 1
        3.7    8.1   7.3        1.1    9.8   2.9    2.2  2  ABA_WDS   ABA/WDS induced protein


Domain annotation for each model (and alignments):
>> Tim17  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.9   7.0   8.8e-45   3.9e-41       1     111 []      38     162 ..      38     162 .. 0.98

  Alignments for each domain:
  == domain 1  score: 139.9 bits;  conditional E-value: 8.8e-45
       Tim17   1 cvyktglsgvlGallGavfglvkgsrradtp............apskerlreglrsvgkrgpslGknfgvvgglysgiecaleklRgkediwnsvaAGa 87 
                 c  kt++sgv+G++lG+vfgl+++s+++dtp            +p++++l++g++++g+r+ s++knfg+vg++++g+ec++e++R+k+d +n+v+AG+
  KHJ34429.1  38 CPAKTVMSGVMGFALGGVFGLFMASMHYDTPihtsgtaenaksLPLRQQLKAGFKDMGSRSLSSAKNFGKVGAIFAGTECCIEGFRAKNDLMNGVLAGC 136
                 789************************************************************************************************ PP

       Tim17  88 ltGallr..agpqaaavgaiggaafs 111
                 +tG++l+  agpqaaavg++g+aafs
  KHJ34429.1 137 ITGGVLAapAGPQAAAVGCAGFAAFS 162
                 ******669****************7 PP

>> DUF5518  Family of unknown function (DUF5518)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1     0.071   3.2e+02     105     115 ..      46      57 ..      32      73 .. 0.58
   2 ?   13.3   1.6   1.5e-05     0.068      28      83 ..     108     159 ..      96     169 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.071
     DUF5518 105 vilg.aiGGaiG 115
                 +++g a+GG++G
  KHJ34429.1  46 GVMGfALGGVFG 57 
                 222223333333 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 1.5e-05
     DUF5518  28 llgllvg..GlvaGylaggdskdgavaGalaGligaipvlvlllvlllglvaaiggla 83 
                 + +++ g  +++ G+ a++d ++g++aG ++G + a p++ ++++++       +g+a
  KHJ34429.1 108 VGAIFAGteCCIEGFRAKNDLMNGVLAGCITGGVLAAPAGPQAAAVGC------AGFA 159
                 5555555447899**************************998888886......2222 PP

>> Romo1  Reactive mitochondrial oxygen species modulator 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.0   4.1e-05      0.18       1      27 [.      37      63 ..      37      68 .. 0.87
   2 ?    0.7   0.1      0.15   6.8e+02      40      55 ..      91     106 ..      77     117 .. 0.80
   3 ?    2.1   0.5     0.056   2.5e+02      17      33 ..     131     147 ..     124     169 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 4.1e-05
       Romo1  1 scldkikmGalmGaaVGlaiGllfGtf 27
                sc  k  m  +mG+a+G+++Gl++ ++
  KHJ34429.1 37 SCPAKTVMSGVMGFALGGVFGLFMASM 63
                6788999**************998765 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.15
       Romo1  40 lrtlgksmlgsaatFG 55 
                 ++ +g+  l+sa  FG
  KHJ34429.1  91 FKDMGSRSLSSAKNFG 106
                 6778889999999998 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.056
       Romo1  17 GlaiGllfGtfsalryg 33 
                 G+ +G ++G++ a  +g
  KHJ34429.1 131 GVLAGCITGGVLAAPAG 147
                 56666666666666655 PP

>> ABA_WDS  ABA/WDS induced protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.2   0.1         4   1.8e+04      52      63 ..      41      52 ..      40      53 .. 0.73
   2 ?    9.8   2.9   0.00024       1.1      13      64 ..     103     161 ..      95     164 .. 0.80

  Alignments for each domain:
  == domain 1  score: -4.2 bits;  conditional E-value: 4
     ABA_WDS 52 aavAvGsgGyaf 63
                 +v  G  G+a+
  KHJ34429.1 41 KTVMSGVMGFAL 52
                567778889985 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00024
     ABA_WDS  13 erlgelgavaaGAfalyEkheakkdpehar.rHkieeeiaa......avAvGsgGyafh 64 
                 +++g++ga+ aG     E ++ak d  ++     i  ++ a      a+AvG +G+a +
  KHJ34429.1 103 KNFGKVGAIFAGTECCIEGFRAKNDLMNGVlAGCITGGVLAapagpqAAAVGCAGFAAF 161
                 679**********************9998625678888854233444699******976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (176 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.21s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1314.43
//
Query:       KHJ34430.1  [L=411]
Description: putative peroxisomal nadh pyrophosphatase nudt12 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.1e-15   55.7   0.1      1e-14   54.7   0.1    1.4  1  NUDIX          NUDIX domain
    6.1e-13   49.3   0.0    1.4e-12   48.2   0.0    1.6  1  NUDIX-like     NADH pyrophosphatase-like rudimentary NUDIX do
    1.2e-07   31.2   0.5    1.9e-07   30.6   0.5    1.3  1  zf-NADH-PPase  NADH pyrophosphatase zinc ribbon domain


Domain annotation for each model (and alignments):
>> NUDIX  NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   0.1   1.7e-18     1e-14       6     119 ..     256     363 ..     252     373 .. 0.75

  Alignments for each domain:
  == domain 1  score: 54.7 bits;  conditional E-value: 1.7e-18
                 EEEEEEETTSEEEEEEESSSSTTT..EESSEEECBTTSHHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEECSGCSST.ST CS
       NUDIX   6 vgvvllnekgevLlvrrskkpfpg..WelPgGkvepgEtpeeAArREleEEtGleaellellgrlhylapydgpygdeheilyvfleevegelepn.de 101
                 +++v+  + +++Ll r++   +p   +++ +G+vepgE++eeA+rRE++EE G++   + +++      + + py+ + +i  +  + ++ge  +   +
  KHJ34430.1 256 ISAVISHKSDKILLGRQR--SWPKnmYSTLAGFVEPGESIEEAVRREVWEESGVNLGRVVIHS------TQPWPYPANLMIGTISQALPDGETIHLeFD 346
                 56778888888****988..44444579*************************9555555555......55555555555556666777777766669* PP

                 TTEEEEEEEEHHHHHHHH CS
       NUDIX 102 nevsevrwvpleellkek 119
                 +e+++++w+ l+e+ +e+
  KHJ34430.1 347 PELEDAQWFALNEV-REA 363
                 **************.333 PP

>> NUDIX-like  NADH pyrophosphatase-like rudimentary NUDIX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.2   0.0   2.3e-16   1.4e-12       2     102 .]      52     185 ..      51     185 .. 0.89

  Alignments for each domain:
  == domain 1  score: 48.2 bits;  conditional E-value: 2.3e-16
  NUDIX-like   2 arfllfrrgrllves....................eeseeelllpadssaalvgkdseelvfLGldeg...........gapvfAvdvsareee..... 64 
                 + +ll++++++lv++                    +e++ee+l++ + s    + +++ ++fLG  e            g+p+fAvdv++++       
  KHJ34430.1  52 TSVLLLKDLAPLVQDasklayatydqvrgfigenpFEKNEEELIKNYNS----SITLPLVLFLGINEHqlegfeydvykGKPYFAVDVTPKGTVkkeas 146
                 6689***********99******99999999999999999999999999....789********55555777*********************878888 PP

  NUDIX-like  65 ..ikeaeeeggafvelRavmlalsaedaalaaqAralldW 102
                   i++  ++g +f+e  + + +lsa +aa++aqAral+dW
  KHJ34430.1 147 nvIEPMMAKGLSFIERHQNL-KLSAPEAAIFAQARALIDW 185
                 88888888888888876666.******************* PP

>> zf-NADH-PPase  NADH pyrophosphatase zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.5   3.2e-11   1.9e-07       2      31 ..     188     217 ..     187     218 .. 0.95

  Alignments for each domain:
  == domain 1  score: 30.6 bits;  conditional E-value: 3.2e-11
  zf-NADH-PPase   2 thrFCgrCGaptepaeggwarvCpaCgleh 31 
                    +++FC+ CG+ t  + +g +rvCp +++ h
     KHJ34430.1 188 RNQFCAGCGQSTLSVNAGSKRVCPPTDYAH 217
                    89***********************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2956.38
//
Query:       KHJ34431.1  [L=250]
Description: putative pyruvate dehydrogenase kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.8e-07   30.6   0.0    6.9e-06   26.5   0.0    2.1  1  HATPase_c    Histidine kinase-, DNA gyrase B-, and HSP90-like
  ------ inclusion threshold ------
      0.045   13.7   0.0      0.087   12.8   0.0    1.4  1  HATPase_c_2  Histidine kinase-like ATPase domain


Domain annotation for each model (and alignments):
>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   7.7e-10   6.9e-06       5     102 ..      58     225 ..      55     234 .. 0.79

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 7.7e-10
                 HHHHHHHHHHHHHHHH......HS.TTTEEEEEEEEEETEEEEEEEESSSSSTTHHHT......................................... CS
   HATPase_c   5 rLrqiisnlvdNavkf......at.kageieveikaseddlvisveDnGiGipkedlk......................................... 55 
                 +L+ ii +l+ N+ +       ++ k + iev+i  s+++++i+++D G Gi +++l+                                         
  KHJ34431.1  58 HLEYIIGELLRNSTQStiethhSAiKPPPIEVTICESSKHITIRISDRGGGIEPSILPylwsfssgprstqrlinlsqvprmaatlqelgapypqvnnt 156
                 7999***********977655522466688999997668*******************99999999999999999999999999999999999999999 PP

                 ..................GTCSTTCH....HCSTCHTSTSSSHHHHHHHHHHHHTTTEEEEEEETTTEE CS
   HATPase_c  56 ..................klfekfsq....ddstkrggggtGlGlsivkklvelmgGeiwvesepgrGt 102
                                   +  ++fs     + +++ +  + G+Gl +++ +ve + G++++es +g G 
  KHJ34431.1 157 qqfdrdscfsytapaqsnRNLDNFSVgslqNLNERPSNLRLGMGLPLSRIYVEYWAGSLEIESIEGYGV 225
                 888888888888888777333333335553344455568889999999999999999999988887665 PP

>> HATPase_c_2  Histidine kinase-like ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   9.8e-06     0.087      29      81 ..      56     112 ..      47     116 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 9.8e-06
  HATPase_c_2  29 ldeirlaveEactNa....vehayleapegpvevrlesdeealtvevaDsGpgfdpe 81 
                  l +++  ++E++ N     +e ++   +  p+ev+++ +++ +t++++D+G g +p+
   KHJ34431.1  56 LSHLEYIIGELLRNStqstIETHHSAIKPPPIEVTICESSKHITIRISDRGGGIEPS 112
                  566778888888885222266677777779*********************997765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       314  (0.0175135); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.27s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1812.88
//
Query:       KHJ34432.1  [L=239]
Description: putative gtp-binding protein rab2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.6e-50  169.1   0.0    4.3e-48  163.0   0.0    2.1  1  Ras          Ras family
      2e-29  102.2   0.0    2.2e-27   95.6   0.0    2.2  1  Roc          Ras of Complex, Roc, domain of DAPkinase
    1.2e-11   44.4   0.2    5.8e-11   42.1   0.4    1.8  2  Arf          ADP-ribosylation factor family
    1.1e-06   28.3   0.1    2.6e-06   27.1   0.1    1.6  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    8.6e-06   25.3   0.0    1.2e-05   24.8   0.0    1.2  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
    0.00011   22.3   0.0    0.00037   20.6   0.0    2.0  1  MMR_HSR1     50S ribosome-binding GTPase
     0.0005   20.0   1.4       0.68    9.8   0.2    2.4  2  RsgA_GTPase  RsgA GTPase
     0.0066   16.7   0.3       0.04   14.2   0.3    2.1  1  AAA_22       AAA domain
  ------ inclusion threshold ------
       0.11   12.5   0.1        6.9    6.7   0.0    2.4  2  AAA_5        AAA domain (dynein-related subfamily)


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.0   0.0   2.1e-51   4.3e-48       1     161 [.       9     197 ..       9     198 .. 0.94

  Alignments for each domain:
  == domain 1  score: 163.0 bits;  conditional E-value: 2.1e-51
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEET.......................TEEEEEEEEEETTSGGGHHHHHHHHTTESEEE CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievd.......................gkevkleiwDTAGqeefkslrelyyrdaegil 76 
                 Klv +Gds++GK+sl++r  +++F+ +++ Tigv+f ++ + v                        ++ +kl++wDTAGqe +ks++++y+r+a+g+l
  KHJ34432.1   9 KLVCIGDSGTGKSSLTIRLCEGRFSPHHDVTIGVEFGSRILPVGppnsldkssrmniqdtsntnsteQRYMKLSLWDTAGQETYKSVTRSYFRGASGAL 107
                 89*********************************77777777777777777777788889988988999***************************** PP

                 EEEETTBHHHHHTHHHHHHHHHHHSTTTSEEEEEEETTTGGG....G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHHHH CS
         Ras  77 lvyditsresfenvkkwveeikrvaeenvpivLvGnKvDlee....kravsteegeelakelg.lkfletSAktnenveeafeellreil 161
                 lv+dit+r++f +v +w+++++++ae+++++vLvGnK+Dl++    kr+v++ee+ e+a+++g l+++etSAk+  +ve af +++++i+
  KHJ34432.1 108 LVFDITRRHTFLHVMDWLNDLRQIAETDIVVVLVGNKCDLSTegdnKREVEKEEAMEWAQKNGvLEYIETSAKSGDGVEMAFARVAERIY 197
                 ****************************************999999*****************99********************99885 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.6   0.0   1.1e-30   2.2e-27       1     120 []       9     147 ..       9     147 .. 0.78

  Alignments for each domain:
  == domain 1  score: 95.6 bits;  conditional E-value: 1.1e-30
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEE.............EECGGSGGCTTB..TTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEE CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdflt.............kevtkikgvend..kkvkkvklniWDtaGqerfrslhplylreaalai 84 
                 K+v++Gdsg+GK+sl  r++e++fs++++ tigv+f +             ++ ++i+ ++n+  ++++ +kl++WDtaGqe ++s++++y+r+a+ a+
  KHJ34432.1   9 KLVCIGDSGTGKSSLTIRLCEGRFSPHHDVTIGVEFGSrilpvgppnsldkSSRMNIQDTSNTnsTEQRYMKLSLWDTAGQETYKSVTRSYFRGASGAL 107
                 89**********************************87444444443333211234555544411445559**************************** PP

                 EEEE...GHHHHCHHHHHHHHHHHCSSS.-EEEEEE-TTT CS
         Roc  85 lvyd...srssenlkeWlkelkkvagks.pvilvgnkiDl 120
                 lv+d   ++++ ++ +Wl++l++ a+++ +v+lvgnk+Dl
  KHJ34432.1 108 LVFDitrRHTFLHVMDWLNDLRQIAETDiVVVLVGNKCDL 147
                 ****632224557789********997626679*****95 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       0.3   6.1e+02      14      41 ..       7      34 ..       1      45 [. 0.78
   2 !   42.1   0.4   2.9e-14   5.8e-11      45     174 ..      68     195 ..      55     196 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.3
                EEEEEEEESTTSSHHHHHHHHHHSSCEE CS
         Arf 14 elrilllGLDnaGKtTilkklkleelvt 41
                 ++++ +G  ++GK+ +  +l +++++ 
  KHJ34432.1  7 IAKLVCIGDSGTGKSSLTIRLCEGRFSP 34
                579999**9*********9999998865 PP

  == domain 2  score: 42.1 bits;  conditional E-value: 2.9e-14
                 SSSEEEEEEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHCTSGCCTTSEEEEEEE-TTSTTS.S-HHHHHHHTTG CS
         Arf  45 TigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDlpea.lseeelrellgl 142
                 T  +n+++ e + +k+++wD  Gqe+ +++ ++Yf+   + + v D + r+ + +  + L+ l +  e   +++++++NK Dl++   +++e++++ ++
  KHJ34432.1  68 T--SNTNSTEQRYMKLSLWDTAGQETYKSVTRSYFRGASGALLVFDITRRHTFLHVMDWLNDLRQIAETD-IVVVLVGNKCDLSTEgDNKREVEKEEAM 163
                 4..45666778889*************************************************9999876.556667*****98661567899999999 PP

                 GGSSSSSSEEEEEEBTTTTBTHHHHHHHHHHH CS
         Arf 143 eelkgkrkleiqkcsavkgeglkeglewlses 174
                 e  +++  le +++sa +g+g++ ++ +++e 
  KHJ34432.1 164 EWAQKNGVLEYIETSAKSGDGVEMAFARVAER 195
                 9999999*******************999876 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.1   1.3e-09   2.6e-06       4     183 ..       8     187 ..       5     202 .. 0.69

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 1.3e-09
                 EEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHH...HHHST.........HCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHHHH CS
    GTP_EFTU   4 rnigiighvDhGKtTLtdrLlyktgaiskkgeka...eeerv.........lDtlkeErergiTiksaaisleketkkylinliDtPGHvdFskevirg 90 
                  +++ ig+  +GK++Lt rL    g+ s ++ ++   e   +           +l++  +  i  +s++ s+e  ++  +++l Dt G + + + +   
  KHJ34432.1   8 AKLVCIGDSGTGKSSLTIRLC--EGRFSPHHDVTigvE---FgsrilpvgpPNSLDKSSRMNIQDTSNTNSTE--QRYMKLSLWDTAGQETYKSVTRSY 99 
                 567889999999999999999..566666667664341...33445777653333333333444444444444..88899************9988888 PP

                 HHT-SEEEEEEETTTB.....STHHHHHHHHHHHHTTTEEEEEEESCGST..HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTBTHH CS
    GTP_EFTU  91 lrvlDgavlvvdaveG.....vepqteevlrlalkegvpiivfiNKmDrl..kaelkeiveevkqklsrkeeklekygekgekevpvvfgSalkgegvk 182
                  r + ga+lv+d+++      v +   + lr++ + ++ ++++ NK+D    +++ +e+ +e   +          ++ +g    + + +Sa++g+gv+
  KHJ34432.1 100 FRGASGALLVFDITRRhtflhV-MDWLNDLRQIAETDIVVVLVGNKCDLSteGDNKREVEKEEAMEW---------AQKNG--VLEYIETSAKSGDGVE 186
                 **************88777734.4556678999999************9975444444444444333.........22233..5678888888888877 PP

                 H CS
    GTP_EFTU 183 t 183
                  
  KHJ34432.1 187 M 187
                 4 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   6.1e-09   1.2e-05       1     159 [.       9     179 ..       9     209 .. 0.76

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 6.1e-09
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsiiFd.nylardtlrlgati......................dveksevrflgnltlnlwDcgGqeafveeylssqkeeifrn 76 
                 k++ +G sg GK+s+   + +  +++++ +++g+                        d+++++    + ++l+lwD  Gqe++   +      + fr 
  KHJ34432.1   9 KLVCIGDSGTGKSSLTIRLCEgRFSPHHDVTIGVEFgsrilpvgppnsldkssrmniqDTSNTNSTEQRYMKLSLWDTAGQETYKSVT-----RSYFRG 102
                 67789999999*99998888735899999999988899999********999999999777888888999***********9987775.....677888 PP

   Gtr1_RagA  77 vgvliyVfDvesreleedletlkeilealrqyspeakvfvli.hKmDliqedere.eifeerkeeireeieklekeeiqffaTSi 159
                  +  + VfD++    ++++ +  + l+ lrq+ +   v vl+ +K+Dl +e  ++ e+ +e++ e  ++    +   +++  TS 
  KHJ34432.1 103 ASGALLVFDIT---RRHTFLHVMDWLNDLRQIAETDIVVVLVgNKCDLSTEGDNKrEVEKEEAMEWAQKN---G--VLEYIETSA 179
                 888889*****...67788888999999***9999999999978***99865544044444333333332...2..344555554 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   1.9e-07   0.00037       2     110 ..      10     138 ..       9     177 .. 0.67

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 1.9e-07
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEE.....ETTEE.........................EEEEECGGCSSHHHHHHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvk.....lkgke.........................ielvDtpGliegaseekglgkaf 70 
                  +++G + +GKS+L  +l++   + s ++ +T+ +++g            +                         + l+Dt+G  e   + k++++++
  KHJ34432.1  10 LVCIGDSGTGKSSLTIRLCEG--RFSPHHDVTIGVEFGSRIlpvgpP---NsldkssrmniqdtsntnsteqrymkLSLWDTAG-QE---TYKSVTRSY 99 
                 5789***************84..667788888888877543333330...13333444555555555566666666********.54...666888988 PP

                 HHHHCTSEEEEEEETT.TTCSHHHH...HHHHHHHHHTTSEEEE CS
    MMR_HSR1  71 laleeadlillvvdas.eeklkpld...eeleelleeakkplil 110
                  +   a+ +llv+d++ ++++ ++    ++l ++   a+ ++++
  KHJ34432.1 100 FR--GASGALLVFDITrRHTFLHVMdwlNDLRQI---AETDIVV 138
                 85..578999999988422222222011333333...3333333 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.2   0.00034      0.68     103     121 ..      11      29 ..       5      96 .. 0.84
   2 !    9.5   0.1   0.00043      0.86      39     100 ..     128     195 ..      90     204 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00034
                  EEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase 103 vlvGqSGvGKStLinallp 121
                  v +G SG GKS+L  +l +
   KHJ34432.1  11 VCIGDSGTGKSSLTIRLCE 29 
                  789**********988876 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00043
                  HHHHHHTT-EEEEEEE-GGG--HHH.....HHHHHHHHHHHTT.SEEEE--TTTHTTHHHHHHHCTTS CS
  RsgA_GTPase  39 LvlaeekgiepvivlnKiDlleeee.....eleelkeelealg.yevllvsaktkegleelkellkdk 100
                  L ++ e++i +v+v nK+Dl +e +     e ee +e  ++ g +e + +sak+++g+e   ++++++
   KHJ34432.1 128 LRQIAETDIVVVLVGNKCDLSTEGDnkrevEKEEAMEWAQKNGvLEYIETSAKSGDGVEMAFARVAER 195
                  6678899***************9997776655555565666664678889999998888766666555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.3     2e-05      0.04       8     131 ..      10     144 ..       8     149 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaee.......erpevvfvtlpsst.sskdllrellralglelka.......erlsseellealeqalrarav 91 
                 lv++G sGtGK+ l  rl e     ++  +        +++++ v +p+s  +s+ +  +  +++++   +        ++ +e + +  + ++r ++ 
  KHJ34432.1  10 LVCIGDSGTGKSSLTIRLCEGRF-SPH--HdvtigveFGSRILPVGPPNSLdKSSRMNIQDTSNTNSTEQRymklslwDTAGQETYKSVTRSYFRGASG 105
                 79**********99888888752.222..2346688855555555555555433333333334443333334555555567777888888888888888 PP

      AAA_22  92 ielliiDEaqhlr..s.eealeeLrsllnlsrkgvqliLvGtp 131
                  +ll+ D   + +  + ++ l++Lr++++   +++ ++LvG  
  KHJ34432.1 106 -ALLVFDITRRHTflHvMDWLNDLRQIAE---TDIVVVLVGNK 144
                 .8888887777533436888888888887...99999999976 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0    0.0035       6.9       3      21 ..      11      29 ..       9      31 .. 0.86
   2 ?    3.7   0.0     0.029        58      71     109 ..     182     220 ..     129     236 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0035
                EEE--SSSSHHHHHHHGGG CS
       AAA_5  3 lLvGppGtgKselaerlaa 21
                + +G++GtgKs+l+ rl++
  KHJ34432.1 11 VCIGDSGTGKSSLTIRLCE 29
                569**********999875 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.029
                 EESGGG--HHHHHHHHHHHHSSEEE..-SSSEEE---.. CS
       AAA_5  71 lDEveraesevlnsLlslleerrllleeggelvkakndd 109
                  D+ve+a   v+++  + +e  +++l++++  vk ++ +
  KHJ34432.1 182 GDGVEMAFARVAERIYMNIEAGKYDLNDRRSGVKGPQSK 220
                 59**************************99999888755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 1725.88
//
Query:       KHJ34433.1  [L=282]
Description: putative rna-binding protein fus tls protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-08   33.5   5.9      6e-08   32.6   5.9    1.5  1  WW        WW domain
    1.3e-05   24.9  85.3    0.00023   20.9  24.9    9.5 10  XYPPX     XYPPX repeat (two copies)
    0.00083   19.4   8.5      0.003   17.6   8.5    1.8  1  PMG       PMG protein
  ------ inclusion threshold ------
        4.8    7.1  57.7      0.064   13.3  21.4    3.5  4  DUF2076   Uncharacterized protein conserved in bacteria (DUF2


Domain annotation for each model (and alignments):
>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   5.9   1.3e-11     6e-08       1      31 []      19      49 ..      19      49 .. 0.98

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 1.3e-11
                X-TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW  1 LPpGWeeqwdpdsGrvYYyNheTgetqWekP 31
                +P+G ++qw ++++ ++Y+N  T+++qWekP
  KHJ34433.1 19 VPEGYKAQWNEQYKEWFYVNIYTKKSQWEKP 49
                59****************************9 PP

>> XYPPX  XYPPX repeat (two copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?  -10.5  10.6         4   1.8e+04       4      14 ..       8      13 ..       7      18 .. 0.54
   2 ?   -9.2   9.3         4   1.8e+04       7       9 ..      64      66 ..      53      68 .. 0.59
   3 ?   -2.9   0.8       1.5   6.5e+03       6      14 ..      96     104 ..      96     104 .. 0.58
   4 ?   -6.6  28.8         4   1.8e+04       1      15 []     138     152 ..     126     152 .. 0.99
   5 ?    1.0  45.0     0.084   3.8e+02       1      15 []     153     167 ..     146     172 .. 0.90
   6 !   13.3  22.5   1.2e-05     0.056       1      15 []     163     177 ..     163     177 .. 0.99
   7 !   14.4  23.3   5.3e-06     0.024       1      13 [.     173     185 ..     172     187 .. 0.95
   8 !   20.9  24.9   5.1e-08   0.00023       1      15 []     188     202 ..     188     202 .. 0.99
   9 !   16.1  21.2   1.6e-06    0.0071       1      13 [.     203     215 ..     203     218 .. 0.98
  10 ?   -3.2   0.9       1.8   7.9e+03       5       7 ..     264     266 ..     264     266 .. 0.70

  Alignments for each domain:
  == domain 1  score: -10.5 bits;  conditional E-value: 4
       XYPPX  4 PQGYPPQGYPP 14
                P G      PP
  KHJ34433.1  8 PPGP-----PP 13
                3344.....44 PP

  == domain 2  score: -9.2 bits;  conditional E-value: 4
       XYPPX  7 YPP 9 
                 PP
  KHJ34433.1 64 PPP 66
                233 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 1.5
       XYPPX   6 GYPPQGYPP 14 
                 GY+ Q  PP
  KHJ34433.1  96 GYAQQSLPP 104
                 666566666 PP

  == domain 4  score: -6.6 bits;  conditional E-value: 4
       XYPPX   1 GYPPQGYPPQGYPPQ 15 
                 GYP QGYP Q YPPQ
  KHJ34433.1 138 GYPQQGYPAQSYPPQ 152
                 9*************9 PP

  == domain 5  score: 1.0 bits;  conditional E-value: 0.084
       XYPPX   1 GYPPQGYPPQGYPPQ 15 
                 GYPPQGYPPQGYPPQ
  KHJ34433.1 153 GYPPQGYPPQGYPPQ 167
                 899999999999998 PP

  == domain 6  score: 13.3 bits;  conditional E-value: 1.2e-05
       XYPPX   1 GYPPQGYPPQGYPPQ 15 
                 GYPPQGYP QGYPPQ
  KHJ34433.1 163 GYPPQGYPQQGYPPQ 177
                 9*************9 PP

  == domain 7  score: 14.4 bits;  conditional E-value: 5.3e-06
       XYPPX   1 GYPPQGYPPQGYP 13 
                 GYPPQGYPPQGYP
  KHJ34433.1 173 GYPPQGYPPQGYP 185
                 9***********9 PP

  == domain 8  score: 20.9 bits;  conditional E-value: 5.1e-08
       XYPPX   1 GYPPQGYPPQGYPPQ 15 
                 GYPPQGYPPQGYPPQ
  KHJ34433.1 188 GYPPQGYPPQGYPPQ 202
                 9*************9 PP

  == domain 9  score: 16.1 bits;  conditional E-value: 1.6e-06
       XYPPX   1 GYPPQGYPPQGYP 13 
                 GYPPQGYPPQGYP
  KHJ34433.1 203 GYPPQGYPPQGYP 215
                 9***********9 PP

  == domain 10  score: -3.2 bits;  conditional E-value: 1.8
       XYPPX   5 QGY 7  
                 QGY
  KHJ34433.1 264 QGY 266
                 777 PP

>> PMG  PMG protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   8.5   6.8e-07     0.003      92     174 ..     125     206 ..     120     226 .. 0.85

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 6.8e-07
         PMG  92 sprlsfvsspCqttsagslgfvssscqslsylsnscqplgcgssgfrpleclsksfqslslgssfcrPsvvssksvqpscfrP 174
                 s++++++ +p+q  +  ++g+ ++s  +++y  + ++p+g+ ++g++++++  ++++++++  +++ P  +  +++ p+ + P
  KHJ34433.1 125 SAASGQMNQPPQYGY-PQQGYPAQSYPPQGYPPQGYPPQGYPPQGYPQQGYPPQGYPPQGYPQQGYPPQGYPPQGYPPQGYPP 206
                 566777778887765.5689999999999999999999999999999999999999999999999999999888887777665 PP

>> DUF2076  Uncharacterized protein conserved in bacteria (DUF2076)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   3.0       1.1   4.8e+03     105     131 ..      11      37 ..       6      87 .. 0.60
   2 ?    6.7  20.3    0.0015       6.7      76     145 ..     100     177 ..      88     183 .. 0.64
   3 ?   13.3  21.4   1.4e-05     0.064     104     178 ..     180     256 ..     170     274 .. 0.56
   4 ?   -1.3   0.5      0.41   1.9e+03     237     257 ..     262     279 ..     255     281 .. 0.58

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.1
     DUF2076 105 pspqarpaapagqalgqeeqyaaqpgy 131
                 p+p+a+p+ p g +++++eqy++    
  KHJ34433.1  11 PPPTASPQVPEGYKAQWNEQYKEWFYV 37 
                 666777777777777777666554322 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0015
     DUF2076  76 qqaqeaqaqpssggFLsglFGggkke........rpqpspqarpaapagqalgqeeqyaaqpgyaq.qqaqpqygqpaa 145
                 q+    ++q++  gFL++l+G+++          +p++ + +++ +pa++ ++q  ++++ p ++  +q++pq+g+p++
  KHJ34433.1 100 QSLPP-REQKPKQGFLGKLLGKANGGsaasgqmnQPPQYGYPQQGYPAQSYPPQGYPPQGYPPQGYpPQGYPQQGYPPQ 177
                 33333.4455569********9887767777777677777777777777766666665555533334477777666654 PP

  == domain 3  score: 13.3 bits;  conditional E-value: 1.4e-05
     DUF2076 104 qpspqarpaapagqalgqeeqyaaqpgyaq....qqaqpqygqpaaapqpggGggFLggA.lqtAAGVaGGvllangles 178
                 +p++ +++ +p +  ++q  ++++ p   +    +q++pq+  ++a++++ggG g+ ggA l   AG +GG+ll +++es
  KHJ34433.1 180 PPQGYPQQGYPPQGYPPQGYPPQGYP---PqgypPQGYPQAYGQPAKAKTGGGLGMAGGAaLGVGAGLVGGMLLEDAIES 256
                 23333333333333333332222222...211133444444333333335888899988537999*************97 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 0.41
     DUF2076 237 adaasdddsdddssddgggDD 257
                 +++ ++d+++dd++    gDD
  KHJ34433.1 262 YEQGYQDAQNDDGD---FGDD 279
                 56666777777776...3444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       360  (0.0200792); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 1922.11
//
Query:       KHJ34434.1  [L=746]
Description: putative ctl transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.8e-29  100.9  15.5    7.8e-29  100.9  15.5    2.6  2  Choline_transpo  Plasma-membrane choline transporter
  ------ inclusion threshold ------
       0.28   11.2   3.4       0.27   11.2   1.0    2.3  2  DUF4083          Domain of unknown function (DUF4083)


Domain annotation for each model (and alignments):
>> Choline_transpo  Plasma-membrane choline transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   6.8      0.52   4.7e+03     256     315 ..     290     354 ..     279     363 .. 0.61
   2 !  100.9  15.5   8.8e-33   7.8e-29       4     323 ..     402     724 ..     399     726 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 0.52
  Choline_transpo 256 lflgkllialltgliaylllkatltnpe.........elnsplvpllvvfiiayliasiflsvyesavd 315
                      lfl+ l  +++t ++ +l ++    +p          +l+s +++l+v  +++++++ + l++++s v+
       KHJ34434.1 290 LFLICLGGMFATFFLIFLHTE----TPTttlgdtiytTLHSSFYLLAVDTVVSIFVSLLWLALLKSFVK 354
                      333333222222222222222....22234568888889999999999999999999999998888876 PP

  == domain 2  score: 100.9 bits;  conditional E-value: 8.8e-33
  Choline_transpo   4 livavllllllivlrkrirlaiallkvaskaiksnpslllvplltllllllvsafwivvavalylassgestdkvnsgsesglaavefessskv 97 
                      +i+++ + + +++ r  ++ a+ +l+ ask++ +np ll++ + +l ++++++++w+  + +++l +  +++          l  + f ++++ 
       KHJ34434.1 402 GIFSFAWGYTIYRERYSLKKAVGILEFASKILAANPGLLVMGFSVLGAVVCWTWIWLGMFTRVFLGGRLSTS----------L--ARFVIETSS 483
                      577777788888888899******************************************999966665543..........3..46889999* PP

  Choline_transpo  98 kalllyllfgllWtleflralqqvtvagavasWYfskkkdlp..skfpvlkslkraltyhlGSialgSlilaivqllrlileylekklkkkena 189
                      ++l + ++++++Wtl +++++q+ t+a++v+ WYf+++ ++p  s+  v++++++a+t+ +G+i l Sli  +++l+ l+l +           
       KHJ34434.1 484 WWLGVNFILMYIWTLSVISGIQRSTTAATVSEWYFHRNIKPPpnSTEVVTAAFMNAITTEFGTISLISLISLLIRLPLLVLPR----------- 566
                      ************************************555555345455********************************996........... PP

  Choline_transpo 190 vakcllcclkcclwclekflkflnrnayimvaiyGksFcesakdafellkrnglrvavld...................svvdfvlflgkllia 264
                       +  ll++l    w+ +++    n  ++++ a+++++   sa++  +  +  + +  +++                    + +++l+ +++++a
       KHJ34434.1 567 RIVGLLSILI-YSWIPTQITTLTNPLTLTYAAVHSQPLHVSARNLSQTSFLSFQSS-TNNltqrsfyarnyqqspilpyRLAKIILHATRFIMA 658
                      2223344433.3699****************************9998888888855.44445666777777777776666************** PP

  Choline_transpo 265 lltgliaylllkatltnpe.......elnsplvpllvvfiiayliasiflsvyesavdtifvcfae 323
                      ++ g+ +++ ++++l+            ++++v+ lv+++i++ ++s +  +++ +vd+i +c+  
       KHJ34434.1 659 IGLGFSGWVATAKRLKITSpegngirGSSYAYVVGLVAGFIGWGVLSAVEGILSGVVDAIVICWES 724
                      ********9999877777688*****8889999******************************965 PP

>> DUF4083  Domain of unknown function (DUF4083)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.38   3.4e+03       2      10 ..     316     324 ..     315     354 .. 0.52
   2 ?   11.2   1.0     3e-05      0.27       5      43 ..     356     394 ..     352     395 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.38
     DUF4083   2 lgdliylii 10 
                 lgd+iy+ +
  KHJ34434.1 316 LGDTIYTTL 324
                 566666544 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 3e-05
     DUF4083   5 liyliivivLilllvfsftlfiRrvvsrsaakkkkskel 43 
                 l+yli+viv i+l+ fs++ fi +    s+ ++ +++ l
  KHJ34434.1 356 LVYLILVIVPIVLFSFSLYPFIASFKNTSSRQYISDQAL 394
                 79********************99999999888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (746 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       752  (0.0419432); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.30s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 4936.83
//
Query:       KHJ34435.1  [L=329]
Description: putative sterol-4-alpha-carboxylate 3-dehydrogenase like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-45  154.8   0.0      1e-26   93.6   0.0    2.0  2  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
    6.4e-20   71.6   0.1      5e-18   65.4   0.0    2.2  2  Epimerase        NAD dependent epimerase/dehydratase family
      8e-11   41.9   0.1    8.4e-07   28.7   0.0    2.5  3  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
    3.7e-07   29.5   0.0    7.5e-06   25.2   0.0    2.0  2  RmlD_sub_bind    RmlD substrate binding domain
      2e-06   27.8   0.0    2.8e-06   27.3   0.0    1.2  1  NAD_binding_10   NAD(P)H-binding
    2.9e-06   26.7   0.0    0.00072   18.8   0.0    2.2  2  NAD_binding_4    Male sterility protein
    2.1e-05   23.8   0.0    6.3e-05   22.3   0.0    1.8  2  Polysacc_synt_2  Polysaccharide biosynthesis protein
    0.00056   20.2   0.0     0.0011   19.2   0.0    1.5  1  TrkA_N           TrkA-N domain
     0.0025   17.8   0.0       0.94    9.4   0.0    2.3  2  KR               KR domain
  ------ inclusion threshold ------
      0.078   13.2   0.0       0.31   11.3   0.0    1.8  1  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
      0.089   12.4   0.1       0.18   11.4   0.1    1.4  1  PAR1             PAR1 protein


Domain annotation for each model (and alignments):
>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.6   0.0   6.3e-30     1e-26       1     150 [.      16     161 ..      16     165 .. 0.85
   2 !   60.1   0.0     1e-19   1.6e-16     197     274 ..     163     246 ..     160     252 .. 0.90

  Alignments for each domain:
  == domain 1  score: 93.6 bits;  conditional E-value: 6.3e-30
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrleelkevrvlDlrespelleelskvnvkkviegDvtdkdkleealegv..dvvihlaslvdvagkltedeimkvnvkGTr 97 
                 +v+Gg+GFlG+++v +L +  +  ++ vlDlr+ ++ + e   ++ +++ egD+t+ d++     +   +vvih+as +   g  +++ + kvnv GTr
  KHJ34435.1  16 LVIGGCGFLGHHIVDTLHKSYN-CNISVLDLRTTQNRRPE---SDGIQYFEGDITSVDSILPIFLQTkpSVVIHTASPTLTGG--SKELYWKVNVDGTR 108
                 69****************9997.9*********9999443...4444499*********998865441279999998888877..8899********** PP

   3Beta_HSD  98 nvleacvkagvrvlvYtSsaevvgpnslgeeilngdEeleyesl..hqdaypesK 150
                  v+e+c ka+v++lvYtSsa+++ +n+   +++n+dE++++ ++   ++ y+e+K
  KHJ34435.1 109 CVIETCQKANVNALVYTSSASIISDNM--TDLINADERWPIIPSkyQTEYYSETK 161
                 *************************65..68999*****9855444557788887 PP

  == domain 2  score: 60.1 bits;  conditional E-value: 1e-19
   3Beta_HSD 197 aklglalfkigdeevlsdrvYvgNvawahilAaralqdpkk.......kssvagqayfisddsPvesyddfnltllkelglelks 274
                 + + ++ f++gd+ +l+d++YvgNva+ah lAa al    +       +++v g+a+fi++d+P + ++df++ ++k+ g +++ 
  KHJ34435.1 163 YENSKTGFQLGDNCNLFDFTYVGNVAQAHCLAAAALIMTSQlsttplsHEKVDGEAFFITNDQPIY-FWDFARAVWKSAGSDKGT 246
                 55666789****************************988888899999******************.*************99865 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.4   0.0   3.1e-21     5e-18       1     148 [.      15     163 ..      15     168 .. 0.90
   2 ?    4.1   0.0     0.016        26     203     227 ..     172     196 ..     165     200 .. 0.87

  Alignments for each domain:
  == domain 1  score: 65.4 bits;  conditional E-value: 3.1e-21
                 EEEETTTSHHHHHHHHHHHHCT.SEEEEEES-STTTTCHHCHHCEEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHHHHTHHHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekg.yevigldrlssasntarledlelveldltdrsalerlfkeeqpdavihlAavggvaassedpadfieknlqgtlnl 98 
                 +lV+G+ Gf+G ++v+ l +    ++ +ld +++++++ + + ++  e+d+t  +++  +f +++p +vih A    +  +  +++ +++ n+ gt+ +
  KHJ34435.1  15 VLVIGGCGFLGHHIVDTLHKSYnCNISVLDLRTTQNRRPESDGIQYFEGDITSVDSILPIFLQTKPSVVIHTAS---PTLTGGSKELYWKVNVDGTRCV 110
                 79*****************999777***********************************************55...66666678889*********** PP

                 HHHHHHHTCTEEEEEEEGGGGTSCSS..SSBSTCSTTS--.--SSHHHHHHHH CS
   Epimerase  99 leaarkagvkrllflsSsevYGkdae..qpkeettltgpl.kpnspYaaaKla 148
                 +e ++ka+v+ l++ sS+++  ++ +  +  +e     p  ++++ Y+ +K++
  KHJ34435.1 111 IETCQKANVNALVYTSSASIISDNMTdlINADERWPIIPSkYQTEYYSETKVY 163
                 **********************99995545677775666689******99987 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.016
                 ETTST-EEEEEEHHHHHHHHHHHHH CS
   Epimerase 203 lgdgtalRdflyveDvaeaillvle 227
                 lgd  +l df yv  va+a++l+++
  KHJ34435.1 172 LGDNCNLFDFTYVGNVAQAHCLAAA 196
                 57777899*************9976 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   5.1e-10   8.4e-07       1     132 [.      16     131 ..      16     169 .. 0.72
   2 ?   -2.6   0.0       1.7   2.7e+03     207     234 ..     165     192 ..     159     197 .. 0.78
   3 !   11.0   0.0   0.00012       0.2     304     331 ..     287     314 ..     230     315 .. 0.86

  Alignments for each domain:
  == domain 1  score: 28.7 bits;  conditional E-value: 5.1e-10
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHTTSHH CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklhkgDltDssslerllaevqpdevynLAAqshVdvsfekPe 96 
                    L+ G+ Gf G ++++ L +  y++ +   ++  ++ ++      +p+   ++ ++ ++gD+t  +s+  ++ +++p  v++ A     + s e   
     KHJ34435.1  16 LVIGGCGFLGHHIVDTLHKS-YNCNI-SVLDLRTT-QNR-----RPE---SDGIQYFEGDITSVDSILPIFLQTKPSVVIHTASPTLTGGSKE--- 97 
                    899*************9987.66533.22222222.222.....122...356899*********************************9987... PP

                    HHHHHHTHHHHHHHHHHHHCT..TTSEEEEEEEGGG CS
  GDP_Man_Dehyd  97 ytaevnvlGtlrLLeairalglekkvrfyqaStsEv 132
                     +++vnv Gt  ++e +++++++  + +y +S s +
     KHJ34435.1  98 LYWKVNVDGTRCVIETCQKANVN--ALVYTSSASII 131
                    7******************9984..66676666644 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.7
                    TS-C-EECTTTT-EEEEEEHHHHHHHHH CS
  GDP_Man_Dehyd 207 gkqevlylGnldakRdwghvkDyveamw 234
                    + ++ ++lG+  +  d+++v  +++a  
     KHJ34435.1 165 NSKTGFQLGDNCNLFDFTYVGNVAQAHC 192
                    556678899999999****999988865 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 0.00012
                    SB--B-THHHHHHH----SS-HHHHHHH CS
  GDP_Man_Dehyd 304 dlllgdaskakeeLgWkpkvsfeelvre 331
                     +++ d+skak+ Lg++p+v++ e++++
     KHJ34435.1 287 MTRYYDCSKAKRLLGYTPEVHLWEGIER 314
                    46789*******************9985 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   4.6e-09   7.5e-06       2     105 ..      14     131 ..      13     167 .. 0.84
   2 ?    2.3   0.0     0.045        74     197     242 ..     205     253 ..     184     257 .. 0.74

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 4.6e-09
                    EEEEESTTSHHHHHHHHHCTTT.SEEEEEE-TT...............T--TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHH CS
  RmlD_sub_bind   2 kilvtGanGqlGseLakqlaee.glevlaltre...............eldltdaeavaellkeakpdvvvnaAAytavDkaEseeeaayavnaea 81 
                    ++lv+G+ G lG ++++ l+++ ++++  l+ +               e d+t  +++  ++ ++kp+vv+++A  t        +e+  +vn+++
     KHJ34435.1  14 NVLVIGGCGFLGHHIVDTLHKSyNCNISVLDLRttqnrrpesdgiqyfEGDITSVDSILPIFLQTKPSVVIHTASPTLTGG---SKELYWKVNVDG 106
                    689*************99988434444444333457999***********************************9998765...68999******* PP

                    HHHHHHHHHHCT-.EEEEEEEGGGS CS
  RmlD_sub_bind  82 vealAeaaaavga.lLihvStDyVF 105
                    ++ + e ++++++  L++ S+  + 
     KHJ34435.1 107 TRCVIETCQKANVnALVYTSSASII 131
                    ***********98469***997665 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.045
                    HHHCHH.GGG.-EEEE---BS-EEHHHHHHHHHHHHCHTT..SEEEEE- CS
  RmlD_sub_bind 197 lekaaeekel.agvyHlanegetswlefArailkeagads..eevkpis 242
                     ++ ++++++  + + ++n++ +   +fAra+ k+ag+d+  e+v  is
     KHJ34435.1 205 STTPLSHEKVdGEAFFITNDQPIYFWDFARAVWKSAGSDKgtEHVWEIS 253
                    3444444444588999*********************999877777665 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.3   0.0   1.7e-09   2.8e-06       1     125 [.      19     157 ..      19     170 .. 0.69

  Alignments for each domain:
  == domain 1  score: 27.3 bits;  conditional E-value: 1.7e-09
                     TTTSHHHHHHHHHHHHC-T-EEEEE.ETTHHHCHHHHCTTTCEEEE--TT-CCHHHHHHTT-S..EEEES-.....--TCC.....HHHHHHHHH CS
  NAD_binding_10   1 GAtGkvGrllvkellargghevtal.vRnpeklaeleaeeglevvegdvtdvedlaealkgad..aVvsal.....ggggk.....deegakniv 82 
                     G+ G  G+++v+ l ++ + ++ +l  R+++     ++++g++ +egd+t+v+++   + ++   +V+ ++     gg+++     + +g++ ++
      KHJ34435.1  19 GGCGFLGHHIVDTLHKSYNCNISVLdLRTTQNRR--PESDGIQYFEGDITSVDSILPIFLQTKpsVVIHTAsptltGGSKElywkvNVDGTRCVI 111
                     889************9986666665455554444..4689*******************8776547777776666433333788777777***** PP

                     HHHHHCT--EEEEEEETTTTSGCGCHHHHHHHH...CCHHHHHHHH CS
  NAD_binding_10  83 daakeagvkRfvlvsaigvgdevpgefgewnke...llkaylaakr 125
                     + +++a+v+ +v+ s++ +  + ++++ + +++   + ++y  + +
      KHJ34435.1 112 ETCQKANVNALVYTSSASIISDNMTDLINADERwpiIPSKYQTEYY 157
                     *****************99754444432222222212333333333 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.0    0.0039       6.4       3      32 ..      19      48 ..      17      69 .. 0.80
   2 !   18.8   0.0   4.4e-07   0.00072      87     147 ..      79     139 ..      73     170 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0039
                   -TTSHHHHHHHHHHHHHS-.TEEEEE.E-SS CS
  NAD_binding_4  3 GaTGFLGkvLlekLLrttpevkiyll.vRak 32
                   G+ GFLG +++  L ++ + ++i +l +R++
     KHJ34435.1 19 GGCGFLGHHIVDTLHKSYN-CNISVLdLRTT 48
                   9************998876.57777755555 PP

  == domain 2  score: 18.8 bits;  conditional E-value: 4.4e-07
                    H--EEEE--SS-S.STTSSEEHHHHHHHHHHHHHHHTSSS--.-EEEEEE.GGGTTS-TTT- CS
  NAD_binding_4  87 evdviihsaAtvnfdepykellrvNveGtrevlelakklkklkvllhvST.ayvngeregev 147
                    + +v+ih a  +   ++ +  ++vNv+Gtr v+e ++k + + +l++ S+ ++++++ ++ +
     KHJ34435.1  79 KPSVVIHTASPTLTGGSKELYWKVNVDGTRCVIETCQKANVN-ALVYTSSaSIISDNMTDLI 139
                    5679******9999999999*****************99888.*******677777666554 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   3.8e-08   6.3e-05       1     128 [.      15     127 ..      15     135 .. 0.83
   2 ?   -2.1   0.0         1   1.6e+03     222     259 ..     215     252 ..     201     273 .. 0.72

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 3.8e-08
                      EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT..T-SEEEE------HHHHH CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleelkvdvvfhaAAlKhVPlve 94 
                      vlv G+ G +G+++v+++ k+   +i +l+   ++  + e+        + ++++     gd++  +++  ++ ++k+ vv+h+A     P++ 
       KHJ34435.1  15 VLVIGGCGFLGHHIVDTLHKSYNCNISVLDLRTTQNRRPES--------DGIQYF----EGDITSVDSILPIFLQTKPSVVIHTAS----PTLT 92 
                      89*******************99999999977655444333........334444....5*************************8....5555 PP

                      H.SHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEE CS
  Polysacc_synt_2  95 e.npleaiktNvlgtenvieaaieagvkkvvliSt 128
                             +k Nv gt+ vie++++a+v+++v+ S+
       KHJ34435.1  93 GgSKELYWKVNVDGTRCVIETCQKANVNALVYTSS 127
                      414555689***********************997 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1
                      SS-EEEE--.-EEEHHHHHHHH..........SSSS-E CS
  Polysacc_synt_2 222 ggeifvldmGepvkivdlakalielsgleekkeediei 259
                      +ge f     +p+   d a+a+ + +g ++ +e+  ei
       KHJ34435.1 215 DGEAFFITNDQPIYFWDFARAVWKSAGSDKGTEHVWEI 252
                      45655555559999999999999999987776555555 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   6.8e-07    0.0011       2      72 ..      17      88 ..      16     132 .. 0.88

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 6.8e-07
                EEES-SHHHHHHHHHHHH.TTEEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGGESEEEE-SSS CS
      TrkA_N  2 iiiGlGrvGrslaeeLse.ggkdvvvidkdeerveelreeglevvvgdatdeevLeeagiekadaviaatgd 72
                +i G+G +G +++++L++ ++ +++v d +  + ++ + +g++++ gd t+ + +  + +++  +v++ t +
  KHJ34435.1 17 VIGGCGFLGHHIVDTLHKsYNCNISVLDLRTTQNRRPESDGIQYFEGDITSVDSILPIFLQTKPSVVIHTAS 88
                7899**************76656*****************************99988888888888877765 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.0   0.00058      0.94       1      34 [.      13      46 ..      13      88 .. 0.78
   2 !    6.2   0.0    0.0052       8.5     112     144 ..     103     135 ..      90     138 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00058
                SEEEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS CS
          KR  1 gtylitGGlGgLGlelarwlaekgarhlvllsRs 34
                g +l++GG+G LG +++++l ++ + ++ +l  +
  KHJ34435.1 13 GNVLVIGGCGFLGHHIVDTLHKSYNCNISVLDLR 46
                678*****************99988888777544 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0052
                 TTHHHHHHHHHTTTS--SEEEEEEEHHHHH--T CS
          KR 112 KvkGawnLhelledesldffvlfSSiagllgsa 144
                  v+G++ + e++++ +++ +v++SS++ +  ++
  KHJ34435.1 103 NVDGTRCVIETCQKANVNALVYTSSASIISDNM 135
                 589**********************99887765 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00019      0.31       1      81 [.      15      91 ..      15     105 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00019
                     EEEE--.SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHHTTTCEEEEE--TTTHHHHHHHHHTTS.SEEEE-SSGGG CS
  Sacchrp_dh_NADP  1 vliiGa.GsvGqavaellarhfdvdaeitvadrskeklealaakalgvrfeaialdaenyeavLaallkeg.dlvvnlsppis 81
                     vl+iG+ G+ G+ +++ l+++ +   +i v d   ++ ++      +  ++  + d+  ++++L   l+ +  +v++ + p++
       KHJ34435.1 15 VLVIGGcGFLGHHIVDTLHKSYNC--NISVLDLRTTQNRRP----ESDGIQYFEGDITSVDSILPIFLQTKpSVVIHTASPTL 91
                     7899999**************999..******999994444....5788999999999999*999999999999999999885 PP

>> PAR1  PAR1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   0.00011      0.18      14      56 ..     101     143 ..      95     145 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00011
        PAR1  14 avsssgkrcvleksvkrsgeeeytcrtseveaeklkelietde 56 
                  v   g rcv+e+  k++ ++     ++ + ++++++li++de
  KHJ34435.1 101 KVNVDGTRCVIETCQKANVNALVYTSSASIISDNMTDLINADE 143
                 67889********9999997766667778999********997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       536  (0.0298957); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 2348.37
//
Query:       KHJ34436.1  [L=542]
Description: putative malate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     5e-228  757.6   0.0   5.7e-228  757.4   0.0    1.0  1  Malate_synthase  Malate synthase
  ------ inclusion threshold ------
      0.016   14.4   0.0       0.03   13.5   0.0    1.4  1  HpcH_HpaI        HpcH/HpaI aldolase/citrate lyase family


Domain annotation for each model (and alignments):
>> Malate_synthase  Malate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  757.4   0.0  6.4e-232  5.7e-228       5     525 ..      15     530 ..      11     531 .. 0.99

  Alignments for each domain:
  == domain 1  score: 757.4 bits;  conditional E-value: 6.4e-232
                      CHHTHHHHCHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHSHHHCCTCCCH-TSS---S-EECCCCE-TCCCCCCC-CCHCCCCC CS
  Malate_synthase   5 keevleaaeilteealefvaelvrdltprrrelLeeRdelqaeidkgelndflketkylreepewktatlhielqdrrveiiGkadrkmiinal 98 
                      +++++ +++ilt++al+f+a l+++++++r++lL++R  +q e+d+g l+dfl+etky+re+++wk a  +++l drrvei+G++drkm++nal
       KHJ34436.1  15 GTITDFNKKILTSDALNFLALLHNSFNENRKQLLQRRVIRQGELDRGFLPDFLPETKYIREDDTWKGAKPAPGLIDRRVEITGPTDRKMVVNAL 108
                      56677789************************************************************************************** PP

                      CCSSSEEEEESSTTS--HHHHHHCCHHCCCHCCTTT-EEEET-TSEEEEETTSESSSSEEEEE---TTTEEEEEECTTCEEEHHHHHHHHHHHH CS
  Malate_synthase  99 nesaittiaDfEDsvapnwenlvkGqlnledavrgrisfrkenkdksYklndglegrsllfvRnrGwhltekhilvdGeeisegilDfgliffh 192
                      n++++t++aDfEDs ap+w+n+++Gq+nl+da+r++i+f++    k+Ykl++ ++++++l++R+rGwhl+ekh++++Ge+is++++Dfgl+ffh
       KHJ34436.1 109 NSDVWTYMADFEDSNAPTWDNMINGQVNLYDAIRREIDFKQS--SKQYKLRS-DRKLPTLIIRPRGWHLDEKHVTIEGEPISGSLFDFGLYFFH 199
                      ****************************************98..9******5.99*************************************** PP

                      HHHHCSCCTTSSEEEEE-S-SSHHHHHHHHHHHHHHHHHCTSSTTSCEEEEEE-SHHHHTTHHHHHHCTTTTEEEEEE-CHHHHHHHHHHTCCC CS
  Malate_synthase 193 nakelklsrgggpyivlPKmegpqEaalwnevFsraedllglprgtikatvliEtlraslnldeiiyelrdrvaglNcGrlDyifseiktlrea 286
                      nakel ++r  gpy++lPKme++ Ea+lwn+vF++a+d++g+ rgti+atvliEt+ a++++deiiyelrd++aglNcGr+Dyifs+ik++r++
       KHJ34436.1 200 NAKEL-IKRDLGPYFYLPKMESYLEARLWNDVFNLAQDYIGISRGTIRATVLIETILAAFEMDEIIYELRDHSAGLNCGRWDYIFSMIKKFRHH 292
                      *****.**************************************************************************************** PP

                      CGCB...CGGGGCCSHHHHHHHHHHHHHHHHTT.CCCCCCCTCSEECCCEHHHCCCHHHHHHHCHHHHHCT-SEEEESSHHHHHHHHHHHHHCH CS
  Malate_synthase 287 gdmvLPdRkavtktapfikaYekllvktchkrgvhamgGlaakipikkdmeaneellekvredKlrevraGadgaWvahPtlatlaaevfeevd 380
                      ++++LPdR++vt+t+pf++aY+kll++tch+r+vhamgG+aa+ipik+d+ ane+++e v++dKlrev+ G+dg+WvahP+la++a+evf++++
       KHJ34436.1 293 SAFILPDRSNVTMTVPFMEAYVKLLIQTCHRRQVHAMGGMAAQIPIKEDKVANEKAMEGVYADKLREVKSGHDGTWVAHPALASIASEVFNKYM 386
                      ********************************************************************************************** PP

                      CHCHHCCHHTTTHHHHHHHHCS.--BBHHHHHHHHHHHHHHHHHHHHHHCT-SSEEETTEEESHHHHHHHHHHHHHHHHTTSC-CCHSHCHHHH CS
  Malate_synthase 381 vapnQielakeevritaddLltkipeaeeteeglrnnvqvglqYvvaWlrgvGcvpiihLmEDaATaeiSrqqlaqWirhgvvlkeqgvkvsle 474
                       +pnQi +++++++i+ +dLl+   +++ te+g+r+n+++gl+Y++ WlrgvGcvpi+hLmEDaATae+Sr+ql+qW+rhg+++ e g+kv++ 
       KHJ34436.1 387 PTPNQIFVRRNDAKISRHDLLNMNFAGKVTEDGIRKNLNIGLGYMEGWLRGVGCVPINHLMEDAATAEVSRSQLWQWVRHGIQTAE-GKKVEKS 479
                      **********************99999***********************************************************.7****** PP

                      HHHHHHHHHCCHHHHHHHCCTTHHHCHHHHHHHHHTTTCCC-CHHHHHCCH CS
  Malate_synthase 475 lmaklvdeenarleelgkedeayreaakllkkeataeefadfltlkaykel 525
                      +  kl++ee+++l++ g + ++y+ aa++l+ ++ +e++adfltl++y+e+
       KHJ34436.1 480 YALKLLQEEVDKLSRGGSTGNKYQLAAQYLSGQIVGEDYADFLTLLLYDEI 530
                      *************************************************98 PP

>> HpcH_HpaI  HpcH/HpaI aldolase/citrate lyase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   3.3e-06      0.03      88     171 ..     213     312 ..     201     372 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.3e-06
                 EEESS--SHHHHHHHHHHTSHTTTS---HCCC-EEEEEE-SHHHHHTHHHHH..TSTTEEEEEE-HHHHHHHTT-TTSTTSHHHH.............. CS
   HpcH_HpaI  88 vlvPkvetaeealevvsalrepekgirganketrllaqiEsaegvknaeeIa..avegldgvflGaeDlsadlgtkrspegtevl.............. 170
                 + +Pk e+  ea+    +++ +++ i+++ +++r  + iE+ ++  +++eI+    +  +g+  G  D+  ++  k   +   +l              
  KHJ34436.1 213 FYLPKMESYLEARLWNDVFNLAQDYIGISRGTIRATVLIETILAAFEMDEIIyeLRDHSAGLNCGRWDYIFSMIKKFRHHSAFILpdrsnvtmtvpfme 311
                 679*************************************************9556789999********99977665554444466666666666664 PP

                 H CS
   HpcH_HpaI 171 d 171
                 +
  KHJ34436.1 312 A 312
                 2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (542 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       319  (0.0177924); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 4042.81
//
Query:       KHJ34437.1  [L=217]
Description: putative gpi anchored protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.015   16.0   0.2      0.021   15.5   0.2    1.2  1  PHR       PHR domain


Domain annotation for each model (and alignments):
>> PHR  PHR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.5   0.2   1.2e-06     0.021      44     136 ..      71     163 ..      52     177 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.2e-06
         PHR  44 yevklel...istekqesnekvlaenetevvsdg..sekifevkfekpveiepnvkYtaraklkgpdksyyGtkGlrevtvkdgkvtFqFssselsnN 136
                  ++++++    s+  +++ ++vl++   ++++ g  +   ++v ++k ++i+++++ t+++ ++++d+ + G+  ++++t+  g   F F  +++s+N
  KHJ34437.1  71 AQTNIQVliaFSSTPTTNFKTVLRK---TFTESGmgKFCLTNVNMPKELDIHEGTNATIQVITNSDDEAMGGYYSCSDITF--GISAFDFDICQNSTN 163
                 4455555322122222333333333...333333225668999*******************999999*************..8889*******9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       380  (0.0211947); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.19s 00:00:00.60 Elapsed: 00:00:00.36
# Mc/sec: 1796.19
//
Query:       KHJ34438.1  [L=405]
Description: putative ww domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.4e-10   38.6   3.4      2e-09   37.4   3.4    1.7  1  WW        WW domain
    9.7e-10   38.5   0.1    9.7e-10   38.5   0.1    3.9  4  FF        FF domain


Domain annotation for each model (and alignments):
>> WW  WW domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.4   3.4   2.2e-13     2e-09       1      31 []      14      43 ..      14      43 .. 0.98

  Alignments for each domain:
  == domain 1  score: 37.4 bits;  conditional E-value: 2.2e-13
                X-TTEEEEE-TTTT-EEEEETTT--EESS-- CS
          WW  1 LPpGWeeqwdpdsGrvYYyNheTgetqWekP 31
                LP+GW e++ p+ G +YYyN  T++++ ++P
  KHJ34438.1 14 LPSGWTEHKAPT-GHTYYYNAVTKQSTYTRP 43
                8***********.****************99 PP

>> FF  FF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0     0.086   7.7e+02       9      21 ..       1      13 [.       1      20 [. 0.88
   2 ?   -1.0   0.1      0.23   2.1e+03      29      40 ..     138     149 ..     132     153 .. 0.78
   3 !   38.5   0.1   1.1e-13   9.7e-10       5      51 .]     280     327 ..     277     327 .. 0.97
   4 ?    1.3   2.7     0.043   3.9e+02       5      51 .]     350     395 ..     344     395 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.086
                HHHHCSSS-TTSS CS
          FF  9 LLkehkeitpkst 21
                +Lk++ +itp s 
  KHJ34438.1  1 MLKSTYKITPPSE 13
                9*********984 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.23
                 CTTSCCCHHGTS CS
          FF  29 lenDpRYlalld 40 
                 +e+D+ ++ +++
  KHJ34438.1 138 IEKDQSFWRIPE 149
                 99******9943 PP

  == domain 3  score: 38.5 bits;  conditional E-value: 1.1e-13
                 HHHHHHHHCSSS-TTSSHHHHHH..HCTTSCCCHHGTSHHHHHHHHHHH CS
          FF   5 aFkeLLkehkeitpkstWseikk..ilenDpRYlalldkseReelFedy 51 
                  Fk +L+e + ++p+s W++i+   il++D RY+al++++ R+++++++
  KHJ34438.1 280 LFKDMLDEFN-VNPYSPWDKIINegILIDDIRYTALPNMKMRKKVWDEW 327
                 5*********.***********************************998 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.043
                 HHHHHHHHCSSS-TTSSHHHHHHHCTTSCCCHHG.TSHHHHHHHHHHH CS
          FF   5 aFkeLLkehkeitpkstWseikkilenDpRYlal.ldkseReelFedy 51 
                  + ++L  h   tpk  W e+k++ +++ + +   l++++Re+++ +y
  KHJ34438.1 350 LYTQFLLKHA--TPKLYWLEFKRKYRKENEMRDPgLTDKDREKMYREY 395
                 5666666676..99999************999999*********9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       752  (0.0419432); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.20s 00:00:00.70 Elapsed: 00:00:00.37
# Mc/sec: 3263.71
//
Query:       KHJ34439.1  [L=210]
Description: putative bap31 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-48  164.6   9.1    1.3e-48  164.3   9.1    1.1  1  Bap31          Bap31/Bap29 transmembrane region
    1.2e-13   50.8   1.0    2.5e-13   49.8   1.0    1.5  1  Bap31_Bap29_C  Bap31/Bap29 cytoplasmic coiled-coil domain
     0.0086   15.8   4.0       0.91    9.3   0.1    3.0  3  DivIC          Septum formation initiator
  ------ inclusion threshold ------
        6.1    6.8   6.8        1.4    8.8   0.8    2.4  2  CAMSAP_CC1     Spectrin-binding region of Ca2+-Calmodulin


Domain annotation for each model (and alignments):
>> Bap31  Bap31/Bap29 transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.3   9.1   2.9e-52   1.3e-48       1     134 [.       1     138 [.       1     139 [. 0.97

  Alignments for each domain:
  == domain 1  score: 164.3 bits;  conditional E-value: 2.9e-52
       Bap31   1 msLqytlvaalLvaeivvvllLvlPlpsavrkklfksllvsklsaklqialkillifllllflDavrrvrkvseeeeea....aaklkleaesevqark 95 
                 m+L+y++v++lLv e+++++lL++Plp+++r+k+f ++++++++aklq+++ki +if+l+lf+D+v+rv++v+ e++e      ++++ +++ evqark
  KHJ34439.1   1 MTLYYSMVFLLLVSEMALFVLLIIPLPFTIRRKIFIFISENPTIAKLQYGMKIAFIFILILFIDSVNRVYRVQLELAETnrqqGSAVMGHERLEVQARK 99 
                 9************************************************************************9999887777667899********** PP

       Bap31  96 FyaQRNlYlsGftLfLslvlrrlvtliselakleaklea 134
                 Fy+QRN+Yl+GftLfLsl+l+r++tli ++++le+k+++
  KHJ34439.1 100 FYSQRNMYLCGFTLFLSLILNRTYTLILDVLRLEEKVKK 138
                 ************************************987 PP

>> Bap31_Bap29_C  Bap31/Bap29 cytoplasmic coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.8   1.0   5.5e-17   2.5e-13       2      49 ..     161     209 ..     160     210 .] 0.94

  Alignments for each domain:
  == domain 1  score: 49.8 bits;  conditional E-value: 5.5e-17
  Bap31_Bap29_C   2 eiekLkkeLkkkkkDlealKkQaeglakEYDrLadehskl.desedKKd 49 
                    ei++L+  L++k+ Dle+lKkQ+egl++EY++L+d+  ++  +s++KKd
     KHJ34439.1 161 EIARLRMSLAEKDRDLETLKKQSEGLSREYNKLSDQFGETeIDSTPKKD 209
                    9****************************************77779999 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.5   0.3    0.0015       6.8       3      48 ..      53      98 ..      51     106 .. 0.81
   2 ?   -2.7   0.0       1.2   5.2e+03      42      50 ..     131     139 ..     114     144 .. 0.61
   3 !    9.3   0.1    0.0002      0.91      21      54 ..     164     196 ..     158     203 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0015
                XXXXXXXXXXXXXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
       DivIC  3 llfllllifgkkgllaykqlkqeiaalqaelaklkaeneeLeaevk 48
                ++f++ li++  +++++++++ e+a+ +++  +     e+Le + +
  KHJ34439.1 53 IAFIFILILFIDSVNRVYRVQLELAETNRQQGSAVMGHERLEVQAR 98
                6899***********************9998776666666665555 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.2
                 HHHHHHCC- CS
       DivIC  42 eLeaevkdL 50 
                 +Le++vk++
  KHJ34439.1 131 RLEEKVKKY 139
                 345555554 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.0002
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXXX CS
       DivIC  21 qlkqeiaalqaelaklkaeneeLeaevkdLksde 54 
                 +l+  +a++ ++l++lk++ e L +e ++L sd+
  KHJ34439.1 164 RLRMSLAEKDRDLETLKKQSEGLSREYNKL-SDQ 196
                 67778999**********************.554 PP

>> CAMSAP_CC1  Spectrin-binding region of Ca2+-Calmodulin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.7       0.1   4.6e+02      21      31 ..     130     140 ..     129     145 .. 0.83
   2 ?    8.8   0.8   0.00032       1.4      14      40 ..     160     186 ..     142     194 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.1
  CAMSAP_CC1  21 lkLEEKRRaIE 31 
                 l+LEEK ++ E
  KHJ34439.1 130 LRLEEKVKKYE 140
                 89****88766 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00032
  CAMSAP_CC1  14 selselrlkLEEKRRaIEaqKrkiEaa 40 
                  e+  lr+ L EK R  E  K++ E +
  KHJ34439.1 160 GEIARLRMSLAEKDRDLETLKKQSEGL 186
                 5899******************99965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1086  (0.0605723); expected 358.6 (0.02)
Passed bias filter:                      687  (0.0383178); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 1647.51
//
Query:       KHJ34440.1  [L=726]
Description: putative trna-dihydrouridine synthase b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.1e-42  146.2   0.0    2.7e-30  105.5   0.0    2.5  2  Dus        Dihydrouridine synthase (Dus)
     0.0033   17.2   0.3     0.0033   17.2   0.3    2.7  2  zf-CCCH_4  CCCH-type zinc finger
  ------ inclusion threshold ------
      0.019   15.2   0.0       0.06   13.6   0.0    1.8  1  DUF1433    Protein of unknown function (DUF1433)
        1.4    9.0   4.1        4.2    7.5   0.4    2.8  2  zf_CCCH_4  Zinc finger domain


Domain annotation for each model (and alignments):
>> Dus  Dihydrouridine synthase (Dus)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.5   0.0   6.1e-34   2.7e-30       1     177 [.     320     529 ..     320     538 .. 0.89
   2 !   38.2   0.0   1.9e-13   8.4e-10     183     251 ..     559     625 ..     532     652 .. 0.77

  Alignments for each domain:
  == domain 1  score: 105.5 bits;  conditional E-value: 6.1e-34
                 EE---TTTS-HHHHHHHHHTT-SSEEEEEEEE-SSS---HHHHHHH-GGGGGT....................SCEEEEEE-S-HHHHHHHHHHHHH.. CS
         Dus   1 llaPmagvtdlpfRelvrefgataLvvtemvtakaivreekvrirmlseeeee....................tplavQlggsdpallaeaAklvad.. 77 
                 +laP+  + +lpfR+l+  fga+ L+++em  +  +++ +k ++  +++ ++e                     +   Q+ +s+p ++ +a ++  +  
  KHJ34440.1 320 ILAPLTTQGNLPFRRLCIDFGAQ-LTYSEMAMSIPLIQGQKTEWTLMKAHKSEivppmhnprftisgydnnkdLKFGAQISASKPWQAIKATEILSKll 417
                 59*********************.**************************999*****************98888899******************977 PP

                 TT-SCEEEEESSTTEEETTEEEGGGGGGSHHHHHHHHHHHHCCSS.S-EEEEEESESSTTTC.HHHHH...........HHHHHCT-SEEEEESSECCC CS
         Dus  78 lgadeIdlNvGCPskkvtrggaGaaLlrkpdlvaqivkavvkave.iPvtvkirigiddeeenalela...........kiveaaGaqaltvHgRtraq 164
                 l+   IdlN+GCP++ v ++gaG+aLl     ++++v+ +    + iPv+vkir+g +d+  +a + +           +++ a G++a+t+HgR+r+q
  KHJ34440.1 418 LNLRVIDLNCGCPIDMVFQSGAGSALLDSNSKLEKMVRGMNLVSGsIPVSVKIRMGTKDDRPTAQRTIerlafgseylrERIGAPGCAAITLHGRSRQQ 516
                 7899************************************998889**********99766655555411111122222456789************** PP

                 TT-CG--CHHHHH CS
         Dus 165 nyegtadweaIke 177
                 +y++ adw+ I+e
  KHJ34440.1 517 RYTKVADWKYIAE 529
                 ***********97 PP

  == domain 2  score: 38.2 bits;  conditional E-value: 1.9e-13
                 S..S-EEEESS--SHHHHHHHHHHH--SEEEESCHHCCSTTHHHHHHHHHHSC------HHHHHHHHHHHH CS
         Dus 183 s..ipviaNGdIkdaedaqaileetGadgvmigrgalgnPwlfaestavktgeaepapplaeeaeiveehl 251
                 +  i +i+NGd+++  d  ++++++G+d vm++rgal +Pw+f+   ++++g++  +    e+++ ve+  
  KHJ34440.1 559 TnkIFFIGNGDCFSHIDYFNHIHNSGVDSVMVARGALVKPWIFE---EIEKGQYLDKSA-TERLTYVEKFT 625
                 2369***************************************9...555655544443.45555555444 PP

>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.3   7.4e-07    0.0033      11      22 .]     152     163 ..     151     163 .. 0.98
   2 ?    0.4   2.7      0.14   6.2e+02       8      19 ..     189     200 ..     179     201 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 7.4e-07
   zf-CCCH_4  11 CrfGdnCrFsHd 22 
                 C+fG++Cr sHd
  KHJ34440.1 152 CKFGEKCRLSHD 163
                 ***********9 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.14
   zf-CCCH_4   8 kGsCrfGdnCrF 19 
                 +G+C  G +CrF
  KHJ34440.1 189 NGICFSGWKCRF 200
                 77999999***9 PP

>> DUF1433  Protein of unknown function (DUF1433)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.3e-05      0.06      32      76 ..     375     417 ..     367     422 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.3e-05
     DUF1433  32 Pmgva..vieGYindnkeldFvAsisteenfefgtalskseeldkll 76 
                 Pm ++  +i+GY ++nk+l+F A+is ++ ++   a++++e l+kll
  KHJ34440.1 375 PMHNPrfTISGY-DNNKDLKFGAQISASKPWQ---AIKATEILSKLL 417
                 787763369***.678****************...999999999987 PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.4   0.00094       4.2       9      16 ..     152     159 ..     150     162 .. 0.89
   2 ?    1.6   0.3     0.068     3e+02       7      17 ..     190     200 ..     188     201 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00094
   zf_CCCH_4   9 CkkGdkCr 16 
                 Ck+G+kCr
  KHJ34440.1 152 CKFGEKCR 159
                 *******8 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.068
   zf_CCCH_4   7 GtCkkGdkCrF 17 
                 G C  G kCrF
  KHJ34440.1 190 GICFSGWKCRF 200
                 666669****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (726 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       653  (0.0364214); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.39
# Mc/sec: 5529.02
//
Query:       KHJ34441.1  [L=537]
Description: putative deoxyribodipyrimidine photo-lyase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.3e-78  260.3   0.9    1.3e-77  259.8   0.9    1.2  1  FAD_binding_7   FAD binding domain of DNA photolyase
    2.6e-41  141.3   0.1    4.9e-41  140.5   0.1    1.4  1  DNA_photolyase  DNA photolyase
  ------ inclusion threshold ------
       0.18   12.3   0.2         12    6.4   0.0    2.5  2  ParB            ParB family


Domain annotation for each model (and alignments):
>> FAD_binding_7  FAD binding domain of DNA photolyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  259.8   0.9   2.3e-81   1.3e-77       1     202 []     333     530 ..     333     530 .. 0.95

  Alignments for each domain:
  == domain 1  score: 259.8 bits;  conditional E-value: 2.3e-81
                    HHHHHHHHHHHHHHHHCSTTTT.TSSTTGCCTT------HH.HHHHHHTT-SS-HHHHHHHHHHHHHS---HHHHHHHHHHHCTTT-B-HHHHHHH CS
  FAD_binding_7   1 flreLlwrefyyallaaepela.eralkekfdripweeseeekleaWkeGrTGfPlvDAamrqLretGwmhnrlRmivasFltkdLlidWregeev 95 
                    +++e++wr+fy+++l+++  ++  +++k+++ +i+we +ee +l+aWkeGrTG+P+vDAamrqL++tGwmhnrlRm++asFl+k+Ll+dWr ge++
     KHJ34441.1 333 WISEVAWRDFYKHVLVEWSYVCmYKPFKPEYTNIQWECNEE-HLNAWKEGRTGYPIVDAAMRQLTHTGWMHNRLRMVTASFLSKHLLLDWRLGEQF 427
                    99****************999889************98866.7***************************************************** PP

                    HHHH-TT--CCHHHHHHHHHCT-STTS-STT----CCCCHHHCSTT-HHHHHH-GGGTTS-.HHHHT-GGGSGCHHHHHHT--TTTSS---SS-HH CS
  FAD_binding_7  96 FeellvDadlasnagnwqwlagtgadaapafrifnpvkqgkkfDpegeyirrwvpeLkklp.akyihepwkapaeeqkkagvvlgkdYpkpivdhk 190
                    F+  l+D+d+asn+g+w w+a++g+d +p+frifnp  q++kfD++g++ir+w+peLk ++ ak+ih+p         + + +++  Y k iv hk
     KHJ34441.1 428 FMLNLIDGDFASNNGGWGWSASSGVDPQPYFRIFNPELQSEKFDKNGDFIRKWIPELKAVKgAKAIHDPFGRG-----AISEAKKGGYVKRIVAHK 518
                    *************************************************************999*****9544.....345577899********* PP

                    HHHHHHHHHHHH CS
  FAD_binding_7 191 earkraleayke 202
                    ear+r+l++yke
     KHJ34441.1 519 EARDRCLARYKE 530
                    *********985 PP

>> DNA_photolyase  DNA photolyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.5   0.1   8.1e-45   4.9e-41       1     157 [.      41     205 ..      41     218 .. 0.89

  Alignments for each domain:
  == domain 1  score: 140.5 bits;  conditional E-value: 8.1e-45
                     EEEEESS---STT-HHHHHH....HCTTSEEEEEEEE-HH..HHTCGS-CHHHHHHHHHHHHHHHHHHHHTT--EEEEESS....HHHHHHHHHH CS
  DNA_photolyase   1 vlvWfrrDlRlhDNpALaaA....aasgepvipvfvldpe..kahklrvgaarvdfllesLadLdeeLrelgirLvvrrgd....padvlpelak 85 
                     v++Wf+ DlRl+DN+AL aA    ++sg p+i  ++++pe  +ah    +++rvdf+l+sL+ L+++L++l i+L+v +++    +   +++l++
      KHJ34441.1  41 VVHWFKSDLRLKDNHALSAAsekaQKSGVPLITFYIVSPEdyEAHL--RAPIRVDFILRSLKTLQDDLAKLHIPLYVETVEkrreVPLRIAQLLN 133
                     79****************986665777889**********755555..5*******************************95555555566**** PP

                     HCTECEEEEE---SHHHHHHHHHHHHHHHHCTSEEEEE--SSSS-HHHHHTTTSSSHSSHHHHHHCHHHHHC CS
  DNA_photolyase  86 elgasavvanreyepdererdeavkealrkagievesfddhtlvepgevktkkgkpykvFtpfrkrwlkelk 157
                      +g +++++n eye+de +r++a+ + l+ ++i++   +d+++v+pg+v +++g  y+vFtp++++w   l 
      KHJ34441.1 134 NWGTKHLFTNMEYEVDELRREAAMVRDLASQDIAFDVRHDTCVVPPGKVVNGTGNQYSVFTPWFRNWVTYLH 205
                     *******************************************************************98554 PP

>> ParB  ParB family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.02   1.2e+02       4      33 ..      46      75 ..      45     111 .. 0.79
   2 ?    6.4   0.0    0.0021        12      70     105 ..     245     282 ..     222     291 .. 0.79

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.02
        ParB  4 aseLtlaDYklLlkvaeklekkdvelseli 33
                 s+L l+D ++L+ ++ek++k++v l ++ 
  KHJ34441.1 46 KSDLRLKDNHALSAASEKAQKSGVPLITFY 75
                69********************99988765 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0021
        ParB  70 kkpkkkdkavvekLaefedkkqfarkkt..kkRlvsYe 105
                 k+ +k + +  ++L+   +k+ far  +  k+R+ sY 
  KHJ34441.1 245 KQLSKEEEKRFTALWPAGEKEAFARLEKfcKERITSYK 282
                 333444444689*************88889*****996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (537 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.38
# Mc/sec: 4237.40
//
Query:       KHJ34442.1  [L=76]
Description: hypothetical protein EV44_g0347 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.015   14.4   0.2      0.016   14.3   0.2    1.0  1  7tm_6     7tm Odorant receptor
      0.043   13.9   0.0      0.048   13.7   0.0    1.1  1  Sensor    Putative sensor


Domain annotation for each model (and alignments):
>> 7tm_6  7tm Odorant receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.2   1.8e-06     0.016     127     176 ..       2      57 ..       1      62 [. 0.80

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.8e-06
       7tm_6 127 fsvlqnillDvlfcslllflclhlqlLkgrleelged......nelteeeerqeLk 176
                 fs++ +i+  + f+++l+++c+++ +L +r+e+ + +      ++++e+++ +eL+
  KHJ34442.1   2 FSLIDQISILCTFIVFLIVACALCLCLGDRIEQRRIEgvlkldEDRKERQKERELR 57 
                 78888999999**********************99888888764444444456665 PP

>> Sensor  Putative sensor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   5.4e-06     0.048      33      77 ..      15      62 ..       2      70 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 5.4e-06
      Sensor 33 lplLalalllargla.aveRrrarlllglpvprph.rapep..pgllar 77
                ++ L++a +l+  l+ ++e+rr++ +l+l+ +r++ +++    +gll++
  KHJ34442.1 15 IVFLIVACALCLCLGdRIEQRRIEGVLKLDEDRKErQKE-RelRGLLSW 62
                56677788888888868************9998884444.459999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (76 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       920  (0.0513135); expected 358.6 (0.02)
Passed bias filter:                      697  (0.0388756); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 565.86
//
Query:       KHJ34443.1  [L=146]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1074.65
//
Query:       KHJ34444.1  [L=429]
Description: hypothetical protein EV44_g0656 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2990.51
//
Query:       KHJ34445.1  [L=565]
Description: putative ntf2-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.19   11.1   0.0    1.3  1  DUF5040   Domain of unknown function (DUF5040)


Domain annotation for each model (and alignments):
>> DUF5040  Domain of unknown function (DUF5040)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   1.1e-05      0.19      59     112 ..     403     455 ..     389     480 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 1.1e-05
     DUF5040  59 dnidalvimqvhnkdvyeeanlkekytdyktpfdrsnyaaaydyvikrylsecy 112
                 d+ d    m+vh+ ++ ++an+k++ +d+++ f  s+ + ++    k+ l +  
  KHJ34445.1 403 DKQDG-STMEVHETNIPSHANVKDRQKDFEAHFTMSDKSPSFTPTEKKSLDKAK 455
                 55554.469****************************99988877777665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (565 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       304  (0.0169558); expected 358.6 (0.02)
Passed bias filter:                      231  (0.0128842); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.19s 00:00:00.70 Elapsed: 00:00:00.36
# Mc/sec: 4691.73
//
Query:       KHJ34446.1  [L=329]
Description: putative domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.5e-59  199.9   0.0    5.4e-59  199.6   0.0    1.1  1  Carb_kinase   Carbohydrate kinase
    0.00044   19.7   0.0    0.00071   19.0   0.0    1.3  1  HK            Hydroxyethylthiazole kinase family
  ------ inclusion threshold ------
       0.11   11.8   0.0       0.42   10.0   0.0    1.9  2  Phos_pyr_kin  Phosphomethylpyrimidine kinase


Domain annotation for each model (and alignments):
>> Carb_kinase  Carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.6   0.0   9.1e-63   5.4e-59       1     243 [.      38     315 ..      38     316 .. 0.93

  Alignments for each domain:
  == domain 1  score: 199.6 bits;  conditional E-value: 9.1e-63
                  EEEEE-BTTCHHHHHHHHHHHHCTT-SEEEEEESSTTTCCCCTTTTTCEECCTT...........HTTTS....--SSS-SEEEE-TT-SSSHCHHH. CS
  Carb_kinase   1 vlvigGsedytGAallaalaalrlgaglvsvateseaiavlksylpevivhpll...........edeqa.kileklerldavviGpGLgrdekikk. 85 
                  v vigG++dytGA++++a a++rlga++ +v++e++a +v+k+y+p+++vhpl+            ++ a +i++ l r++++v+GpGLg+d+ +   
   KHJ34446.1  38 VAVIGGCKDYTGAPYFSAMATARLGADMSHVICEPQAGQVIKTYSPNLMVHPLMresnqagendsASSLAeEIIKMLPRIHVLVLGPGLGEDKLMLDt 135
                  679***********************************************************99755666799**********************999 PP

                  ...HCHHHCCCCS-EEEEGGGGGSGGGG...TTTTSSEEEE--HHHHHHHCTTTCH..HCCSHHHHHHHHHHHHTTEEEEESTTSEEEECTTEEEEE- CS
  Carb_kinase  86 ...lleevlekdeplviDAdgLnllaqknelserkaeviLTPhkkEfkrLlkaivk..keddrlelarelaqklnavvllkgekdvivspegevlins 178
                     ++e +++++ p+++DA++L+l ++  ++ +  +e iLTP+++Ef rL+ +  +  +  +++e+ +ela++ ++v ++++ +   +s ++ ++i++
   KHJ34446.1 136 calVIEAARKRNMPCILDANALTLAQNRPDIIQDYSECILTPNVGEFRRLCRSKAIdsSRLSKQECSAELARAFGGVTVIQKGVFDFISNGERTIICD 233
                  99999**********************************************876655588899*********99876665555555555599****** PP

                  ---GGG-STTHHHHHHHHHHHHHHCTS.................SHHHHHHHHHHHHHHHHHHHCCCT-TS-HCHHHHHHHC CS
  Carb_kinase 179 tgssalakGGsGDvLaGligalLaqne.................asyeaaiaaawlhgaasdeaaekkgvgmlatelskiip 243
                    ++++++GG+GD+L+G ++ +L++ +                 + + a++ ++ + +++s++a+ +kg++++a +l ++i 
   KHJ34446.1 234 VKGGLKRSGGQGDTLTGCLATFLCWRKayldklwnhddefdsseSLALAVLGGSAITRECSRLAFLNKGRSLQASDLTEEIN 315
                  ****************************************9999899999***************************99986 PP

>> HK  Hydroxyethylthiazole kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   1.2e-07   0.00071      64     202 ..     132     260 ..     102     271 .. 0.73

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.2e-07
                 HHHHHHHHHHHHHHTT--EEEE-TTBTTBHHHHHHHHHHHHHS--SEEEEEHHHHHHHHTSSCCSCSSSSSS-SHHHHHHHHHHHHHHTSEEEE.ESSS CS
          HK  64 aiealkaAvksakevnrPvvlDPVgvgAtelRrelalellkevklavikGNasEilslaglelkvkGvDskeaataavaavqkvAqklrvvvvv.tGev 161
                   +++   +++a++ n+P +lD  + +  + R +++++        ++  N +E   l     ++k +Ds+  +++  +   ++A+ ++ v v+  G +
  KHJ34446.1 132 MLDTCALVIEAARKRNMPCILDANALTLAQNRPDIIQDY----SECILTPNVGEFRRLC----RSKAIDSSRLSKQ--ECSAELARAFGGVTVIqKGVF 220
                 4567778899************99999999998766655....4678999****99886....5799****99997..788899999986655528*** PP

                 EEEEESSE..EEEEE-S-GGGGGSTTHHHHHHHHHHHHHTTBS CS
          HK 162 Dvvsdgkk..vyklknGtellgkitasGCllgsvvaaflavkk 202
                 D++s+g++  +  +k+G   l +  + G +l+  +a+fl   k
  KHJ34446.1 221 DFISNGERtiICDVKGG---LKRSGGQGDTLTGCLATFLCWRK 260
                 *******9444466777...55566666666666666666555 PP

>> Phos_pyr_kin  Phosphomethylpyrimidine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.19   1.1e+03     132     169 ..      90     128 ..      77     156 .. 0.59
   2 ?   10.0   0.0     7e-05      0.42     121     211 ..     173     256 ..     132     264 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.19
                   HHHT.---SSHHHHHHHHHHHHH.TT-SEEEEEEGGS-SS CS
  Phos_pyr_kin 132 aLlg.ekikteedmkeaakkllk.lgakaVlikGghlege 169
                    + + +++ +++++ + a++++k l   +Vl+ G  l ge
    KHJ34446.1  90 LMREsNQAGENDSASSLAEEIIKmLPRIHVLVLGPGL-GE 128
                   4444344446666667777777744555677666555.33 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 7e-05
                   SEEE-BHHHHHHHHT.---SSHH.HHHHHHHHHHH.TT-SEEEEEEGGS-SSSEEEEEEEETSSEEEEEEEE----S--BTHHHHHHHHHHHHH CS
  Phos_pyr_kin 121 tvitPNlpEaeaLlg.ekiktee.dmkeaakkllk.lgakaVlikGghlegeeavvtdvlydgeeveeleaerietknthGtGCtlssaiaael 211
                    ++tPN+ E ++L+  + i++   + +e+  +l++  g  +V+ kG           d++ +ge++++ + +    k+  G G+tl  ++a+ l
    KHJ34446.1 173 CILTPNVGEFRRLCRsKAIDSSRlSKQECSAELARaFGGVTVIQKGV---------FDFISNGERTIICDVKGGL-KRSGGQGDTLTGCLATFL 256
                   589************66666555355666777877678888887775.........3676666665555555554.888888888888888877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       425  (0.0237046); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2328.87
//
Query:       KHJ34447.1  [L=232]
Description: putative elongation factor 1-beta [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.9e-31  106.8   0.7    9.5e-31  105.8   0.7    1.4  1  EF1_GNE         EF-1 guanine nucleotide exchange domain
      1e-13   51.4   3.1      1e-13   51.4   3.1    1.8  2  EF-1_beta_acid  Eukaryotic elongation factor 1 beta central a
  ------ inclusion threshold ------
      0.088   13.0   0.5       0.23   11.7   0.0    2.0  2  GST_C           Glutathione S-transferase, C-terminal domain
       0.13   12.5   0.2       0.55   10.5   0.0    2.0  2  GST_C_3         Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> EF1_GNE  EF-1 guanine nucleotide exchange domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.8   0.7   2.1e-34   9.5e-31       2      87 ..     146     226 ..     145     227 .. 0.97

  Alignments for each domain:
  == domain 1  score: 105.8 bits;  conditional E-value: 2.1e-34
                 EEEEEEESSS---HHHHHHHHHH.HS-TSEE--.--EEE-SSS-EEEEEEEEESSS-GGGGHHHHHHTTS-S.....SEEEEEEEE CS
     EF1_GNE   2 vvlevkPeddetdleelekkvksikleglvwgeasklepiafGlkkLqiscvieddkvstdeleekieeiegeledlVqsveivsf 87 
                 v+l+vkP+ddet++++le++v++i+ +glvwg askl+p++fG+kkLqi++vieddkv++ el+e+ie    ++e+ Vqs +ivs 
  KHJ34447.1 146 VTLDVKPWDDETNMKALEAAVRNIEKDGLVWG-ASKLQPVGFGIKKLQINLVIEDDKVGLTELQEEIE----GFEEFVQSSDIVSH 226
                 89******************************.7**********************************....79*********985 PP

>> EF-1_beta_acid  Eukaryotic elongation factor 1 beta central acidic region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.2   4.4         4   1.8e+04      10      11 ..     102     103 ..      99     105 .. 0.35
   2 !   51.4   3.1   2.3e-17     1e-13       1      28 []     108     134 ..     108     134 .. 0.99

  Alignments for each domain:
  == domain 1  score: -7.2 bits;  conditional E-value: 4
  EF-1_beta_acid  10 De 11 
                     De
      KHJ34447.1 102 DE 103
                     33 PP

  == domain 2  score: 51.4 bits;  conditional E-value: 2.3e-17
  EF-1_beta_acid   1 LFGSDDEEEDeEaerlreeRLaaYaaKK 28 
                     LFGSD+EE D+Eaer+r eRLa+Y++KK
      KHJ34447.1 108 LFGSDEEE-DPEAERIRNERLAEYQKKK 134
                     9*******.******************9 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0     5e-05      0.23      35      69 ..      12      46 ..       4      71 .. 0.83
   2 ?   -1.7   0.2      0.76   3.4e+03      21      40 ..     113     132 ..      91     143 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5e-05
                HHHHHHHHHTSSSSSTTSSCHHHHHHHHHHHHHHH CS
       GST_C 35 lsaleeelkkqdylvGdkltlADialvpilnwlqr 69
                l +l+ +l ++ y+vG  ++ AD+a + +l++++ 
  KHJ34447.1 12 LHILNSWLTTRSYIVGFSPSQADVATFKALKVAPD 46
                778999***********************998754 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.76
                 HHHHHHHHHHHHHHHHHHHH CS
       GST_C  21 eelvdealekvaevlsalee 40 
                 ee+  ea++  +e l+ + +
  KHJ34447.1 113 EEEDPEAERIRNERLAEYQK 132
                 44444444444444444333 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00012      0.55      35      88 ..      14      62 ..       4      65 .. 0.85
   2 ?   -1.1   0.1      0.51   2.3e+03      15      35 ..     113     133 ..     106     144 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00012
                HHHHHHHCHGTSSSSTTS--HHHHHHHHHHHHHHHHTCCCC-HHHHHHHHHHHT CS
     GST_C_3 35 yfekvlkkkgggylvgdklTyADlalfqvldgleeaealkkfpklkalyervea 88
                 ++  l+  +  y+vg + + AD+a f++l+        +++p +++++ ++++
  KHJ34447.1 14 ILNSWLT--TRSYIVGFSPSQADVATFKALKVAPDS---ARYPYAARWHRHISS 62
                5566666..677*****************9999988...789**9999999976 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.51
                 CHHHHHHHHHHHHHHHCHHHH CS
     GST_C_3  15 keeaekkkefleerlpkflky 35 
                 +ee+ +++ +++erl ++ k+
  KHJ34447.1 113 EEEDPEAERIRNERLAEYQKK 133
                 445567777777777777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       640  (0.0356964); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1799.84
//
Query:       KHJ34448.1  [L=726]
Description: putative zinc finger-containing transcription facto [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      1e-15   57.1  51.6    0.00092   19.9   0.8    9.5  9  zf-C2H2_4    C2H2-type zinc finger
    1.1e-13   50.9  61.5    0.00022   21.5   1.6    9.7  9  zf-C2H2      Zinc finger, C2H2 type
    3.8e-10   39.7  54.6    1.7e-06   28.2   1.9    8.4  9  zf-H2C2_2    Zinc-finger double domain
    1.6e-06   28.2  26.5     0.0091   16.3   0.4    7.1  6  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
    0.00085   19.3  28.7      0.021   14.8   0.0    5.2  5  zf-C2H2_6    C2H2-type zinc finger
     0.0074   16.6   2.1     0.0074   16.6   2.1    6.3  5  zf-Di19      Drought induced 19 protein (Di19), zinc-binding
  ------ inclusion threshold ------
      0.011   16.2  21.9      0.093   13.2   0.0    5.5  5  zf-met       Zinc-finger of C2H2 type
      0.019   14.5   5.0       0.12   11.8   0.5    2.5  2  DUF2544      Protein of unknown function (DUF2544)
       0.52   10.2   5.9       0.24   11.2   1.4    2.6  2  GAGA         GAGA factor
        6.8    6.7  15.1        1.6    8.7   1.5    4.8  4  zf-C2HC_2    zinc-finger of a C2HC-type


Domain annotation for each model (and alignments):
>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.8      0.11   1.9e+02       1      24 []     300     325 ..     300     325 .. 0.93
   2 ?   -1.8   0.3       4.7   8.5e+03       1      20 [.     369     392 ..     369     396 .. 0.59
   3 !    7.0   0.1    0.0072        13       2      21 ..     405     426 ..     404     429 .. 0.86
   4 !    8.8   0.0    0.0018       3.2       5      24 .]     526     545 ..     524     545 .. 0.93
   5 ?    5.4   0.0     0.024        42       7      23 ..     571     587 ..     564     588 .. 0.81
   6 !   15.1   0.2   1.7e-05     0.031       2      23 ..     594     615 ..     593     616 .. 0.94
   7 !   11.3   5.3   0.00029      0.53       1      23 [.     621     643 ..     621     644 .. 0.93
   8 !   19.9   0.8   5.1e-07   0.00092       2      23 ..     650     671 ..     649     672 .. 0.95
   9 !   14.6   3.1   2.5e-05     0.045       2      23 ..     678     701 ..     677     702 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.11
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkthH 24 
                 f+Cp+  C++   + ++++ H+ + H
  KHJ34448.1 300 FQCPWlnCSRMIETTEQWNEHFHQEH 325
                 89*******************98877 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 4.7
   zf-C2H2_4   1 fkCpi..CgksFsskka..LlrHl 20 
                 ++Cp   C+++    ++  + +H+
  KHJ34448.1 369 YRCPSqnCQQNMELFNNisFHDHM 392
                 678887786655444444466677 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0072
   zf-C2H2_4   2 kCpi..CgksFsskkaLlrHlk 21 
                 +C++  Cg +F ++++L +H  
  KHJ34448.1 405 QCRLwaCGNWFDDPSELVSHAM 426
                 799999**************75 PP

  == domain 4  score: 8.8 bits;  conditional E-value: 0.0018
   zf-C2H2_4   5 iCgksFsskkaLlrHlkthH 24 
                 +Cgk++ s ++L++H+k  H
  KHJ34448.1 526 LCGKNCASENELQNHIKGSH 545
                 6***************9877 PP

  == domain 5  score: 5.4 bits;  conditional E-value: 0.024
   zf-C2H2_4   7 gksFsskkaLlrHlkth 23 
                 ++ F+ + +L rH++th
  KHJ34448.1 571 KAGFTQRGKLERHMATH 587
                 567989999*******9 PP

  == domain 6  score: 15.1 bits;  conditional E-value: 1.7e-05
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlkth 23 
                 +C+iCg sFs ++a+++H + h
  KHJ34448.1 594 TCDICGVSFSAPQAMRQHRRLH 615
                 6*****************9998 PP

  == domain 7  score: 11.3 bits;  conditional E-value: 0.00029
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 +kC++C+k+F+ ++a   H +th
  KHJ34448.1 621 WKCRHCSKTFTQQSACTVHERTH 643
                 59********99999999****9 PP

  == domain 8  score: 19.9 bits;  conditional E-value: 5.1e-07
   zf-C2H2_4   2 kCpiCgksFsskkaLlrHlkth 23 
                 +CpiC k+Fs +++L +H kth
  KHJ34448.1 650 ECPICFKRFSESSNLTKHRKTH 671
                 7********************9 PP

  == domain 9  score: 14.6 bits;  conditional E-value: 2.5e-05
   zf-C2H2_4   2 kCpi..CgksFsskkaLlrHlkth 23 
                  C +  Cgk+F+++++L+rHl+th
  KHJ34448.1 678 VCIYsrCGKTFHRYDQLKRHLLTH 701
                 677788*****************9 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.4     0.083   1.5e+02       1      23 []     300     325 ..     300     325 .. 0.88
   2 ?   -0.5   0.5       1.1   2.1e+03       1      23 []     369     396 ..     369     396 .. 0.71
   3 ?    3.5   0.0     0.064   1.1e+02       4      23 .]     407     429 ..     404     429 .. 0.79
   4 !    6.7   1.3    0.0061        11       5      23 .]     526     545 ..     515     545 .. 0.89
   5 !    8.2   0.0     0.002       3.7       9      23 .]     573     587 ..     556     587 .. 0.92
   6 !   15.7   1.2   8.3e-06     0.015       2      23 .]     594     615 ..     590     615 .. 0.91
   7 !   12.9   5.8   6.7e-05      0.12       2      23 .]     622     643 ..     621     643 .. 0.97
   8 !   21.5   1.6   1.2e-07   0.00022       2      23 .]     650     671 ..     649     671 .. 0.97
   9 !   12.5   3.8   8.7e-05      0.16       5      23 .]     683     701 ..     677     701 .. 0.93

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.083
                 EEET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                 ++Cp   C+++  + ++ + H    H
  KHJ34448.1 300 FQCPwlNCSRMIETTEQWNEHFHQeH 325
                 89************999999976655 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.1
                 EEET..TTT..EEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCg..ksFkrksnLkrHirt.H 23 
                 y+Cp   C   +   ++ ++  H+ + H
  KHJ34448.1 369 YRCPsqNCQqnMELFNNISFHDHMDIaH 396
                 8999999987755557777777776666 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.064
                 T..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   4 p..dCgksFkrksnLkrHirt.H 23 
                     Cg  F ++s+L++H +  H
  KHJ34448.1 407 RlwACGNWFDDPSELVSHAMQnH 429
                 5555777799********98877 PP

  == domain 4  score: 6.7 bits;  conditional E-value: 0.0061
                 TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   5 dCgksFkrksnLkrHirt.H 23 
                  Cgk + +  +L++Hi+  H
  KHJ34448.1 526 LCGKNCASENELQNHIKGsH 545
                 6***************9888 PP

  == domain 5  score: 8.2 bits;  conditional E-value: 0.002
                 EESSHHHHHHHHHCC CS
     zf-C2H2   9 sFkrksnLkrHirtH 23 
                  F+++  L+rH+ tH
  KHJ34448.1 573 GFTQRGKLERHMATH 587
                 59************9 PP

  == domain 6  score: 15.7 bits;  conditional E-value: 8.3e-06
                 EETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                 +C++Cg sF+ +  +++H+r H
  KHJ34448.1 594 TCDICGVSFSAPQAMRQHRRLH 615
                 577*****************99 PP

  == domain 7  score: 12.9 bits;  conditional E-value: 6.7e-05
                 EETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                 kC +C+k+F+++s  ++H rtH
  KHJ34448.1 622 KCRHCSKTFTQQSACTVHERTH 643
                 8********************9 PP

  == domain 8  score: 21.5 bits;  conditional E-value: 1.2e-07
                 EETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                 +Cp+C k+F+ +snL++H++tH
  KHJ34448.1 650 ECPICFKRFSESSNLTKHRKTH 671
                 7********************9 PP

  == domain 9  score: 12.5 bits;  conditional E-value: 8.7e-05
                 TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   5 dCgksFkrksnLkrHirtH 23 
                  Cgk+F r ++LkrH+ tH
  KHJ34448.1 683 RCGKTFHRYDQLKRHLLTH 701
                 5*****************9 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1       1.1     2e+03      14      21 ..     298     308 ..     293     310 .. 0.72
   2 ?   -0.6   0.5       1.2   2.1e+03       5      19 ..     320     336 ..     317     342 .. 0.63
   3 ?   -4.0   0.2        10   1.8e+04      15      18 ..     369     372 ..     366     376 .. 0.69
   4 ?   -0.7   0.1       1.3   2.3e+03       2      17 ..     537     557 ..     536     572 .. 0.67
   5 !   13.2   0.9     5e-05      0.09       2      21 ..     580     596 ..     579     603 .. 0.80
   6 !   28.2   1.9   9.3e-10   1.7e-06       2      25 ..     608     631 ..     607     632 .. 0.93
   7 !   23.4   2.5     3e-08   5.4e-05       4      25 ..     638     659 ..     635     660 .. 0.92
   8 ?    5.0   2.8      0.02        36       1      24 [.     663     688 ..     663     690 .. 0.85
   9 ?    2.5   0.3      0.12   2.2e+02       2      11 ..     694     703 ..     693     707 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.1
   zf-H2C2_2  14 p.yeCp..lCd 21 
                   ++Cp   C+
  KHJ34448.1 298 TsFQCPwlNCS 308
                 349***88886 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.2
   zf-H2C2_2   5 Hir.kHtgekp.yeCpl 19 
                 H+  +H  +   y+Cpl
  KHJ34448.1 320 HFHqEHIDPQMvYTCPL 336
                 654257744444***94 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 10
   zf-H2C2_2  15 yeCp 18 
                 y Cp
  KHJ34448.1 369 YRCP 372
                 99*9 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 1.3
   zf-H2C2_2   2 LrrHir.kHt....gekpyeC 17 
                 L+ Hi+ +H     +++ y C
  KHJ34448.1 537 LQNHIKgSHLesldNKTGYFC 557
                 899999568766666665633 PP

  == domain 5  score: 13.2 bits;  conditional E-value: 5e-05
   zf-H2C2_2   2 LrrHirkHtgekpyeCplCd 21 
                 L+rH+++Ht+   ++C+ Cd
  KHJ34448.1 580 LERHMATHTN---FKCSTCD 596
                 99*******9...8888775 PP

  == domain 6  score: 28.2 bits;  conditional E-value: 9.3e-10
   zf-H2C2_2   2 LrrHirkHtgekpyeCplCdkaFk 25 
                  r+H r Htge+p++C  C+k+F+
  KHJ34448.1 608 MRQHRRLHTGERPWKCRHCSKTFT 631
                 799********************8 PP

  == domain 7  score: 23.4 bits;  conditional E-value: 3e-08
   zf-H2C2_2   4 rHirkHtgekpyeCplCdkaFk 25 
                  H r+Ht+ekp+eCp C k+F+
  KHJ34448.1 638 VHERTHTNEKPLECPICFKRFS 659
                 5*******************96 PP

  == domain 8  score: 5.0 bits;  conditional E-value: 0.02
   zf-H2C2_2   1 nLrrHirkHtgekpyeCp..lCdkaF 24 
                 nL++H ++H     + C    C+k+F
  KHJ34448.1 663 NLTKHRKTHGERGAHVCIysRCGKTF 688
                 89*******77778****755****9 PP

  == domain 9  score: 2.5 bits;  conditional E-value: 0.12
   zf-H2C2_2   2 LrrHirkHtg 11 
                 L+rH+ +Ht+
  KHJ34448.1 694 LKRHLLTHTN 703
                 99*******5 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.3      0.12   2.2e+02       7      21 ..     307     321 ..     305     323 .. 0.93
   2 !   16.3   0.4   5.1e-06    0.0091       5      23 ..     525     543 ..     525     545 .. 0.94
   3 !    5.8   0.1    0.0096        17       4      21 ..     595     612 ..     592     613 .. 0.92
   4 !    5.9   2.0    0.0092        16       2      24 ..     621     643 ..     620     643 .. 0.89
   5 !    9.9   0.1   0.00051      0.91       2      24 ..     649     671 ..     648     672 .. 0.93
   6 ?    1.5   0.2      0.21   3.8e+02       7      23 ..     684     700 ..     684     701 .. 0.90

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.12
                  TTBBBSSHHHHHCCT CS
  zf-C2H2_jaz   7 CdKyFksenaldnHl 21 
                  C+++ ++ +++ +H+
   KHJ34448.1 307 CSRMIETTEQWNEHF 321
                  **************7 PP

  == domain 2  score: 16.3 bits;  conditional E-value: 5.1e-06
                  TTTTBBBSSHHHHHCCTTS CS
  zf-C2H2_jaz   5 vlCdKyFksenaldnHlkS 23 
                  +lC K + sen l+nH+k+
   KHJ34448.1 525 ILCGKNCASENELQNHIKG 543
                  69****************8 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0096
                  BTTTTBBBSSHHHHHCCT CS
  zf-C2H2_jaz   4 CvlCdKyFksenaldnHl 21 
                  C +C   F+  +a+++H 
   KHJ34448.1 595 CDICGVSFSAPQAMRQHR 612
                  *****************7 PP

  == domain 4  score: 5.9 bits;  conditional E-value: 0.0092
                  CBBTTTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHlkSK 24 
                  + C +C+K+F  ++a   H++++
   KHJ34448.1 621 WKCRHCSKTFTQQSACTVHERTH 643
                  68*********999999999875 PP

  == domain 5  score: 9.9 bits;  conditional E-value: 0.00051
                  CBBTTTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHlkSK 24 
                  ++C++C K F+ +++l +H k++
   KHJ34448.1 649 LECPICFKRFSESSNLTKHRKTH 671
                  68*******************97 PP

  == domain 6  score: 1.5 bits;  conditional E-value: 0.21
                  TTBBBSSHHHHHCCTTS CS
  zf-C2H2_jaz   7 CdKyFksenaldnHlkS 23 
                  C K+F+   +l+ Hl +
   KHJ34448.1 684 CGKTFHRYDQLKRHLLT 700
                  99************976 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2       2.9   5.2e+03      17      24 ..     580     587 ..     580     588 .. 0.84
   2 !   14.8   0.0   1.2e-05     0.021       4      24 ..     595     615 ..     594     618 .. 0.93
   3 ?   -0.2   3.6       0.6   1.1e+03       3      24 ..     622     643 ..     621     644 .. 0.76
   4 !   13.2   0.7   3.7e-05     0.066       3      24 ..     650     671 ..     650     673 .. 0.97
   5 !    7.0   1.8    0.0034       6.1       7      24 ..     684     701 ..     676     702 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.9
   zf-C2H2_6  17 LggHkksH 24 
                 L+ H+++H
  KHJ34448.1 580 LERHMATH 587
                 667****9 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 1.2e-05
   zf-C2H2_6   4 CsvCsksFpslqaLggHkksH 24 
                 C++C+ sF+  qa++ H++ H
  KHJ34448.1 595 CDICGVSFSAPQAMRQHRRLH 615
                 ******************977 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.6
   zf-C2H2_6   3 eCsvCsksFpslqaLggHkksH 24 
                 +C  Csk+F  + a + H ++H
  KHJ34448.1 622 KCRHCSKTFTQQSACTVHERTH 643
                 7999*****9877766666665 PP

  == domain 4  score: 13.2 bits;  conditional E-value: 3.7e-05
   zf-C2H2_6   3 eCsvCsksFpslqaLggHkksH 24 
                 eC++C k+F+   +L++H+k+H
  KHJ34448.1 650 ECPICFKRFSESSNLTKHRKTH 671
                 8********************* PP

  == domain 5  score: 7.0 bits;  conditional E-value: 0.0034
   zf-C2H2_6   7 CsksFpslqaLggHkksH 24 
                 C+k+F+ ++ L  H+ +H
  KHJ34448.1 684 CGKTFHRYDQLKRHLLTH 701
                 ***********9999777 PP

>> zf-Di19  Drought induced 19 protein (Di19), zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   2.1   4.1e-06    0.0074       2      54 .]     299     358 ..     298     358 .. 0.84
   2 ?    1.2   0.0      0.27   4.8e+02       8      26 ..     411     430 ..     410     432 .. 0.75
   3 ?    3.3   0.3     0.059     1e+02       8      28 ..     527     548 ..     526     557 .. 0.84
   4 ?    1.3   0.5      0.24   4.3e+02      23      38 ..     581     596 ..     576     616 .. 0.70
   5 !    7.6  11.3    0.0025       4.5       4      48 ..     622     667 ..     620     703 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 4.1e-06
     zf-Di19   2 sftCPy..Cgke.ltvkeLveHvedeHrveskevvCPvCaek....vtkdlvaHltleha 54 
                 sf+CP+  C+++  t+++  eH+ +eH + +  + CP+ ++     ++++  +Hl+++h+
  KHJ34448.1 299 SFQCPWlnCSRMiETTEQWNEHFHQEHIDPQMVYTCPLQTDScppiMAANSLEHLETDHG 358
                 8****988999735778899******************6655444499999*******96 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.27
     zf-Di19   8 Cgkeltv.keLveHvedeHr 26 
                 Cg+ +++ +eLv+H +++Hr
  KHJ34448.1 411 CGNWFDDpSELVSHAMQNHR 430
                 6665544278*********8 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.059
     zf-Di19   8 Cgke.ltvkeLveHvedeHrve 28 
                 Cgk+  +++eL++H++  H ++
  KHJ34448.1 527 CGKNcASENELQNHIKGSHLES 548
                 99954999***********876 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.24
     zf-Di19  23 deHrveskevvCPvCa 38 
                 + H  + ++  C+ C 
  KHJ34448.1 581 ERHMATHTNFKCSTCD 596
                 5799999999999996 PP

  == domain 5  score: 7.6 bits;  conditional E-value: 0.0025
     zf-Di19   4 tCPyCgkeltvkeLveHvedeHrveskevvCPvCaekvtk..dlvaH 48 
                 +C +C+k++t+++ ++  e  H+ e k+  CP+C ++ ++  +l +H
  KHJ34448.1 622 KCRHCSKTFTQQSACTVHERTHTNE-KPLECPICFKRFSEssNLTKH 667
                 799*************999999876.6899****9997754478777 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.3   0.00045      0.81       5      22 ..     526     543 ..     526     544 .. 0.95
   2 ?   13.2   0.0   5.2e-05     0.093       2      19 ..     594     611 ..     593     613 .. 0.95
   3 ?    3.0   3.8     0.082   1.5e+02       1      21 [.     621     641 ..     621     645 .. 0.85
   4 ?   -1.3   0.1       1.9   3.3e+03       2      11 ..     650     659 ..     649     667 .. 0.73
   5 ?   -2.8   0.2       5.3   9.5e+03      15      23 ..     697     705 ..     693     706 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00045
      zf-met   5 lCnvtfnsesqlksHlqG 22 
                 lC + + se+ l++H +G
  KHJ34448.1 526 LCGKNCASENELQNHIKG 543
                 7**************998 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 5.2e-05
      zf-met   2 yCelCnvtfnsesqlksH 19 
                 +C++C v+f+ ++++++H
  KHJ34448.1 594 TCDICGVSFSAPQAMRQH 611
                 6***************** PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.082
      zf-met   1 fyCelCnvtfnsesqlksHlq 21 
                 + C  C +tf+ +s+   H +
  KHJ34448.1 621 WKCRHCSKTFTQQSACTVHER 641
                 89*********9998777765 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 1.9
      zf-met   2 yCelCnvtfn 11 
                 +C++C ++f+
  KHJ34448.1 650 ECPICFKRFS 659
                 7****66665 PP

  == domain 5  score: -2.8 bits;  conditional E-value: 5.3
      zf-met  15 qlksHlqGK 23 
                 +l +H +G 
  KHJ34448.1 697 HLLTHTNGS 705
                 567788775 PP

>> DUF2544  Protein of unknown function (DUF2544)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.5   6.9e-05      0.12      49     126 ..     268     344 ..     263     357 .. 0.78
   2 ?    4.2   0.4     0.014        25     165     217 ..     563     615 ..     522     637 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6.9e-05
     DUF2544  49 ydqtvskaacknlpsnwrncgsytlevivsaeiesdyscpwlvsshivattfitnes...easpggvtysgpdsrdsvcpk 126
                 y ++  +++c+++  +w n  +y+ +   + e  + + cpwl +s+++ tt   ne    e     + y+ p   ds  p 
  KHJ34448.1 268 YGESTRQTSCNDFDQSWSNPDQYSGQ---QNE-FTSFQCPWLNCSRMIETTEQWNEHfhqEHIDPQMVYTCPLQTDSCPPI 344
                 556778899********999999854...555.677***************999985222555667788888888775554 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.014
     DUF2544 165 mkdgklcdsskldergaycrfvasgitltvlgcdkaevsvsavdhpitdkelh 217
                 +++ kl   + + +rg   r++a+   ++++ cd + vs sa +     ++lh
  KHJ34448.1 563 IRECKLGPKAGFTQRGKLERHMATHTNFKCSTCDICGVSFSAPQAMRQHRRLH 615
                 56789999999****************************99987766666666 PP

>> GAGA  GAGA factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.2      0.66   1.2e+03      25      46 ..     593     614 ..     589     621 .. 0.74
   2 ?   11.2   1.4   0.00014      0.24       5      43 ..     630     667 ..     626     671 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.66
                 EE-TTT--EESSHHHHHHHHHH CS
        GAGA  25 AtCPiCqAviRqsRnLRRHLEL 46 
                  tC iC         +R H  L
  KHJ34448.1 593 STCDICGVSFSAPQAMRQHRRL 614
                 69****8777777777776555 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00014
                 --S-SS-----CCCCTTS--EE-TTT--EESSHHHHHHH CS
        GAGA   5 vikrkdgllkiksksqsEqPAtCPiCqAviRqsRnLRRH 43 
                 + ++  ++++ + +   E+P  CPiC      s nL +H
  KHJ34448.1 630 FTQQSACTVHERTHT-NEKPLECPICFKRFSESSNLTKH 667
                 566777887777765.69******************999 PP

>> zf-C2HC_2  zinc-finger of a C2HC-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.51   9.1e+02       4      12 ..     594     602 ..     593     612 .. 0.79
   2 ?    8.7   1.5   0.00091       1.6       4      22 ..     622     641 ..     622     642 .. 0.94
   3 ?    2.2   0.5       0.1   1.8e+02       4      22 ..     650     669 ..     649     670 .. 0.82
   4 ?    1.4   0.1      0.18   3.2e+02       8      21 ..     684     698 ..     682     700 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.51
   zf-C2HC_2   4 pCpkCgRsF 12 
                  C +Cg sF
  KHJ34448.1 594 TCDICGVSF 602
                 6*****776 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00091
   zf-C2HC_2   4 pCpkCgRsF.npdrlekHep 22 
                 +C++C+ +F  ++++ +He+
  KHJ34448.1 622 KCRHCSKTFtQQSACTVHER 641
                 6*****************97 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.1
   zf-C2HC_2   4 pCpkCgRsF.npdrlekHep 22 
                 +Cp+C  +F  ++ l kH +
  KHJ34448.1 650 ECPICFKRFsESSNLTKHRK 669
                 7****999988888888865 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.18
   zf-C2HC_2   8 CgRsF.npdrlekHe 21 
                 Cg +F   d l +H 
  KHJ34448.1 684 CGKTFhRYDQLKRHL 698
                 *****9999999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (726 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       823  (0.0459033); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 4983.98
//
Query:       KHJ34449.1  [L=481]
Description: putative spindle poison sensitivity protein scp3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      2e-11   43.4  12.4    7.6e-06   25.6   3.8    2.5  2  zf-CCCH_4  CCCH-type zinc finger
    8.6e-11   41.5   9.5    9.8e-06   25.4   2.5    2.5  2  zf-CCCH    Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    2.2e-09   37.0  22.4    1.6e-05   24.8   3.8    2.8  3  zf_CCCH_4  Zinc finger domain
    1.8e-08   35.0   6.1    8.6e-05   23.2   0.4    2.6  2  Torus      Torus domain
    4.1e-06   27.0   1.6      1e-05   25.7   1.6    1.6  1  zf-CCCH_3  Zinc-finger containing family
     0.0006   20.2  16.9      0.051   14.1   5.0    2.7  2  zf-CCCH_2  RNA-binding, Nab2-type zinc finger


Domain annotation for each model (and alignments):
>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   1.4   2.5e-08   7.4e-05       1      22 []      55      76 ..      55      76 .. 0.97
   2 !   25.6   3.8   2.5e-09   7.6e-06       2      17 ..      84      99 ..      83     103 .. 0.93

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 2.5e-08
   zf-CCCH_4  1 rlCpyfakGsCrfGdnCrFsHd 22
                ++C++f +G C  G+ C FsHd
  KHJ34449.1 55 VPCKFFRAGTCQAGNSCPFSHD 76
                69*******************9 PP

  == domain 2  score: 25.6 bits;  conditional E-value: 2.5e-09
   zf-CCCH_4  2 lCpyfakGsCrfGdnC 17
                +C+yfakG+CrfG++C
  KHJ34449.1 84 ICKYFAKGNCRFGPKC 99
                8*************** PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   2.5   3.3e-09   9.8e-06       4      27 .]      55      77 ..      53      77 .. 0.88
   2 !   19.8   0.7   1.7e-07   0.00052       5      22 ..      84     100 ..      82     105 .. 0.87

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 3.3e-09
                HCBCHHHHHS--TTGGG-SSBSCS CS
     zf-CCCH  4 elCrffmrtGyCkyGdrCkFaHgq 27
                ++C+ff+  G+C+ G++C+F+H++
  KHJ34449.1 55 VPCKFFRA-GTCQAGNSCPFSHDP 77
                79**7777.*************85 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 1.7e-07
                 CBCHHHHHS--TTGGG-S CS
     zf-CCCH   5 lCrffmrtGyCkyGdrCk 22 
                 +C++f++ G C++G++C 
  KHJ34449.1  84 ICKYFAK-GNCRFGPKCA 100
                 7******.*********6 PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   3.8   5.2e-09   1.6e-05       1      19 []      57      75 ..      57      75 .. 1.00
   2 !   22.7   5.2   2.5e-08   7.4e-05       1      19 []      85     103 ..      85     103 .. 0.98
   3 ?   -2.8   0.2       2.6   7.8e+03       2       8 ..     378     384 ..     378     384 .. 0.85

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 5.2e-09
   zf_CCCH_4  1 CkfflqGtCkkGdkCrFaH 19
                Ckff +GtC+ G++C+F+H
  KHJ34449.1 57 CKFFRAGTCQAGNSCPFSH 75
                ******************* PP

  == domain 2  score: 22.7 bits;  conditional E-value: 2.5e-08
   zf_CCCH_4   1 CkfflqGtCkkGdkCrFaH 19 
                 Ck+f++G+C++G kC  +H
  KHJ34449.1  85 CKYFAKGNCRFGPKCANIH 103
                 ***************9999 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 2.6
   zf_CCCH_4   2 kfflqGt 8  
                 ++f++G+
  KHJ34449.1 378 RYFHNGN 384
                 89*9996 PP

>> Torus  Torus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.6   1.2e-05     0.036      66      92 ..      50      76 ..      41      84 .. 0.83
   2 !   23.2   0.4   2.9e-08   8.6e-05      69      98 ..      81     110 ..      77     117 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.2e-05
                HSTT--B-HHHHHT--SSGGG-SSB-S CS
       Torus 66 kekesyfClfFarGlCakGkkCeylHr 92
                ++++++ C fF  G+C+ G++C + H+
  KHJ34449.1 50 QNTSHVPCKFFRAGTCQAGNSCPFSHD 76
                5567789*******************8 PP

  == domain 2  score: 23.2 bits;  conditional E-value: 2.9e-08
                 T--B-HHHHHT--SSGGG-SSB-S---SS- CS
       Torus  69 esyfClfFarGlCakGkkCeylHrlPteed 98 
                 +  +C +Fa+G C  G kC+ +H lP+ + 
  KHJ34449.1  81 TDNICKYFAKGNCRFGPKCANIHVLPDGRR 110
                 5689**********************8765 PP

>> zf-CCCH_3  Zinc-finger containing family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   1.6   3.3e-09     1e-05       7      55 ..      56     104 ..      50     115 .. 0.85

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 3.3e-09
   zf-CCCH_3   7 dcyffyystctkGdscpfrheeaalGsetvctlWqegrc.lrevckfrhm 55 
                  c ff   tc+ G+scpf h +a+  ++ +c+++ +g+c +  +c   h+
  KHJ34449.1  56 PCKFFRAGTCQAGNSCPFSHDPAST-TDNICKYFAKGNCrFGPKCANIHV 104
                 599******************9987.999**********55678877776 PP

>> zf-CCCH_2  RNA-binding, Nab2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   4.0   0.00012      0.36       1      17 [.      56      75 ..      56      75 .. 0.99
   2 !   14.1   5.0   1.7e-05     0.051       1      17 [.      84     103 ..      84     103 .. 0.97

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00012
   zf-CCCH_2  1 pCrffpn..C.tnpkCpFaH 17
                pC+ff +  C  + +CpF+H
  KHJ34449.1 56 PCKFFRAgtCqAGNSCPFSH 75
                9******************* PP

  == domain 2  score: 14.1 bits;  conditional E-value: 1.7e-05
   zf-CCCH_2   1 pCrffpn..C.tnpkCpFaH 17 
                 +C++f++  C ++pkC  +H
  KHJ34449.1  84 ICKYFAKgnCrFGPKCANIH 103
                 8****************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (481 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.52u 0.20s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 3618.83
//
Query:       KHJ34450.1  [L=401]
Description: hypothetical protein EV44_g3390 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0042   17.6  17.5       0.16   12.5   0.8    3.4  3  Stc1      Stc1 domain
  ------ inclusion threshold ------
      0.054   13.3   1.5       0.14   12.0   0.1    2.2  2  zf-CHC2   CHC2 zinc finger


Domain annotation for each model (and alignments):
>> Stc1  Stc1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.0   3.7    0.0083        75      53      84 ..       5      36 ..       1      37 [. 0.91
   2 !   12.5   0.8   1.8e-05      0.16      43      84 ..     104     144 ..      42     145 .. 0.77
   3 !    9.9   0.4   0.00012       1.1      50      83 ..     186     218 ..     179     220 .. 0.91

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.0083
                EE-SSS--EEESTTS-HHHHHS.SS---HHHH CS
        Stc1 53 leCsaCqktkpldeFsksqrrkpdaarCkdCv 84
                 +C+ C +++p  ++ k+ ++++  ++C +C 
  KHJ34450.1  5 RTCTRCLQSQPSINYMKNVASNTYFKTCSTCR 36
                68********************99999****6 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 1.8e-05
                 TTTS-----EEE-SSS--EEESTTS-HHHHHS.SS---HHHH CS
        Stc1  43 kectakqateleCsaCqktkpldeFsksqrrkpdaarCkdCv 84 
                 + + ++    ++C+ C+  ++  +F  s r++ + +rC +C 
  KHJ34450.1 104 SFHNPNDSNLIHCKGCKTNRNPTSFYDSVRNR-SFKRCHNCR 144
                 4466666677********************99.99******5 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00012
                 --EEE-SSS--EEESTTS-HHHHHS.SS---HHH CS
        Stc1  50 ateleCsaCqktkpldeFsksqrrkpdaarCkdC 83 
                 +++++C  C+k  p + F++   ++   a+C dC
  KHJ34450.1 186 TVNVRCRKCRKNYPSELFANPGSNS-LYATCLDC 218
                 6789*****************9999.99****** PP

>> zf-CHC2  CHC2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.25   2.2e+03      57      83 ..       7      33 ..       5      42 .. 0.74
   2 ?   12.0   0.1   1.5e-05      0.14      44      80 ..     103     139 ..      98     150 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.25
     zf-CHC2 57 CfgCgagGdaikFlmeieklsfveave 83
                C  C ++  +i++++++   ++ ++ +
  KHJ34450.1  7 CTRCLQSQPSINYMKNVASNTYFKTCS 33
                778888888888888888877766554 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 1.5e-05
     zf-CHC2  44 psftvspekqfyyCfgCgagGdaikFlmeieklsfve 80 
                 psf+  ++ ++ +C gC+++ +  +F  ++ + sf+ 
  KHJ34450.1 103 PSFHNPNDSNLIHCKGCKTNRNPTSFYDSVRNRSFKR 139
                 9*********************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (401 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       821  (0.0457917); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2956.53
//
Query:       KHJ34451.1  [L=306]
Description: hypothetical protein EV44_g6143 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.04   13.5   0.0      0.076   12.6   0.0    1.4  1  UPF0220   Uncharacterised protein family (UPF0220)


Domain annotation for each model (and alignments):
>> UPF0220  Uncharacterised protein family (UPF0220)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   4.2e-06     0.076      17      52 ..      42      78 ..      35     101 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.2e-06
     UPF0220 17 nsakrravgvylaGaLfalgfwlliDaaivskka.na 52
                +++k +  ++y  G Lf ++fw +i ++ + +++ n+
  KHJ34451.1 42 VKEKKKRKSIYRVGNLFRIAFWYFIFTCFYCPSSlNS 78
                5677788899********************9988444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       722  (0.04027); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 2400.48
//
Query:       KHJ34452.1  [L=288]
Description: hypothetical protein EV44_g2068 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.11   12.4   3.0       0.11   12.3   0.7    2.0  1  Apolipoprotein  Apolipoprotein A1/A4/E domain
       0.85    9.7   4.9        1.2    9.3   2.0    2.3  2  DUF2120         Uncharacterized protein conserved in archaea 
       0.89   10.0   6.2       0.73   10.3   4.4    1.8  2  Terminase_2     Terminase small subunit


Domain annotation for each model (and alignments):
>> Apolipoprotein  Apolipoprotein A1/A4/E domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.7   1.9e-05      0.11     130     183 ..       2      64 ..       1      71 [. 0.80

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.9e-05
                     HHHHHHHHHH-----..-----SSSHHHHHHHTS-T.........TSHHHHHS--XXXXXXXX CS
  Apolipoprotein 130 laerleelkeslaphaeeveerlssrveelreklee.........qaeelrerleanleelka 183
                     +a+ l+e++e+  ++a+e  ++l++rv+e+  k+            ++el+e ++  le+lka
      KHJ34452.1   2 VAQDLKEWQEKYSNSADEAADELEDRVTEITNKFISdqvenvgnvLLKELEEVVQIGLEKLKA 64 
                     789999999999999999999999999999999877766667777777777777777777776 PP

>> DUF2120  Uncharacterized protein conserved in archaea (DUF2120)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   2.0   0.00019       1.2      35      99 ..       7      68 ..       2      88 .. 0.85
   2 ?    1.1   0.1     0.064   3.9e+02      37      99 ..     104     189 ..      76     223 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00019
     DUF2120 35 keeleeleskleellekldaeevdleseeakkliekldesireveeieeevdafglerlkeslEa 99
                ke+ e++++  +e  ++l+ ++ +++++ +++ +e++++ + +  e  eev ++gle+lk ++ +
  KHJ34452.1  7 KEWQEKYSNSADEAADELEDRVTEITNKFISDQVENVGNVLLK--E-LEEVVQIGLEKLKADIIS 68
                6789*********************************998766..3.3366799******98755 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.064
     DUF2120  37 eleeleskleellekldaeevdleseeakklieklde........................sireveeieeevdafglerlkeslEa 99 
                 + ++ ++ l+el++++  e +++ +      +++++                         + r+ +e+  ++d+ gl++ +++l++
  KHJ34452.1 104 WKQDQNQRLSELISHVVSETLEILDTIRGIGLQEVGMrwawsegvtykhwtkyhamkakfsQWRHDVELV-AIDHPGLKKARSKLDE 189
                 5666777777777777777777776533333333333344444444444444444444444444444444.4555555555555555 PP

>> Terminase_2  Terminase small subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   4.4   0.00012      0.73      45     127 ..       2      87 ..       1     118 [. 0.77
   2 ?    2.3   0.2     0.035   2.1e+02      57     114 ..      72     153 ..      68     229 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00012
  Terminase_2  45 IkkaIreakaereertiieadeVlqellkiaraeitdeve...rvklkdseevdkeilrevkegke...gvkvklkDklkAlellakhl 127
                  +++ ++e +++ +++++  ade+ +++++i +  i+d ve   +v lk+ eev +  l+++k        ++ + +Dk+ A+el+   +
   KHJ34452.1   2 VAQDLKEWQEKYSNSADEAADELEDRVTEITNKFISDQVEnvgNVLLKELEEVVQIGLEKLK---AdiiSITRDSNDKIDAIELISTIV 87 
                  6788999999******************************5555555555555555555555...24558899999*******998876 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.035
  Terminase_2  57 eertiieadeVlqellkiaraeitdeve......rvklkdseevdkeilrevkegke..................gvkvklk 114
                   ++ +i+a e++  ++++    i+++ +      + + ++ +e+ +++++e+ e+ +                  gv++k +
   KHJ34452.1  72 DSNDKIDAIELISTIVRKTGISINEKAQslrawkQDQNQRLSELISHVVSETLEILDtirgiglqevgmrwawseGVTYKHW 153
                  5677888888888888888888888888444333222222222222222222222224444444444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1125  (0.0627475); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 2401.40
//
Query:       KHJ34453.1  [L=245]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       663  (0.0369792); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1854.32
//
Query:       KHJ34454.1  [L=555]
Description: putative homeobox domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-19   69.7   3.5    3.3e-19   68.5   3.5    1.7  1  Homeodomain  Homeodomain
  ------ inclusion threshold ------
      0.019   14.9   0.6      0.048   13.6   0.6    1.7  1  Homeobox_KN  Homeobox KN domain


Domain annotation for each model (and alignments):
>> Homeodomain  Homeodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.5   3.5   3.7e-23   3.3e-19       2      56 ..      18      72 ..      17      73 .. 0.97

  Alignments for each domain:
  == domain 1  score: 68.5 bits;  conditional E-value: 3.7e-23
                 T-SSSS-HHHHHHHHHHHHHSSS-SHHHHHHHHHHHTS-HHHHHHHHHHHHHHHH CS
  Homeodomain  2 rkRttftkeqleeLeklFeenrypsaeereeLAkklgLeerqVkvWFqNrRakek 56
                 +kR++ t++ql +Le +F++n++p+a  re++A+ ++++er V++WFqNrRak k
   KHJ34454.1 18 QKRQRATQDQLVTLEMEFNKNPTPNATVRERIAEDINMTERSVQIWFQNRRAKIK 72
                 69***************************************************88 PP

>> Homeobox_KN  Homeobox KN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.6   5.3e-06     0.048       7      39 ..      37      69 ..      34      70 .. 0.95

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 5.3e-06
  Homeobox_KN  7 hnPYPseedKeeLlkeTglsvkqitnWFINaRr 39
                 +nP P++  +e++++  +++ + ++ WF N R+
   KHJ34454.1 37 KNPTPNATVRERIAEDINMTERSVQIWFQNRRA 69
                 6999**************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 4169.63
//
Query:       KHJ34455.1  [L=219]
Description: putative had superfamily phosphatase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.7e-61  205.3   0.0    5.6e-61  205.0   0.0    1.0  1  PGP_phosphatase  Mitochondrial PGP phosphatase
    1.7e-05   24.7   0.0    2.9e-05   24.1   0.0    1.3  1  Hydrolase_like   HAD-hyrolase-like


Domain annotation for each model (and alignments):
>> PGP_phosphatase  Mitochondrial PGP phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.0   0.0   6.2e-65   5.6e-61       1     167 [.       6     186 ..       6     187 .. 0.97

  Alignments for each domain:
  == domain 1  score: 205.0 bits;  conditional E-value: 6.2e-65
  PGP_phosphatase   1 lsatlavlkllknpslvlPhltvptfrqlpieig.........kkkektikavvlDKDnclaapkedkvaeeikekleelrevypeksilivSN 85 
                      +sat ++++l+ +p+l+lP++++ptf +lp++++         k+++ tikav+lDKDnc+a+p+++ v++++++k+e+l+e+yp+ ++livSN
       KHJ34455.1   6 ISATWNLFRLILQPNLCLPQAKIPTFAHLPVPLEnafvdsngqKRTDITIKAVILDKDNCFATPHTNYVHKSYQKKFEQLKEAYPDGRLLIVSN 99 
                      799**************************************9999999********************************************** PP

  PGP_phosphatase  86 saGssd.dkdaekaealekktg.ipVlrhkekKPgcaeevleyfkerkv...veeadeiavvgDRllTdvllanmmGslgvwlrdgv 167
                      +aG+++ d+++  a++le +tg ++V+rh++kKPgc+ e+l+yf+ ++    v++ad+iavvgDRl+Tdvl+an +Gs+++w+++g+
       KHJ34455.1 100 TAGTTScDPTGILASELESATGgVNVFRHTTKKPGCRAEILNYFRFQRPelgVTRADQIAVVGDRLMTDVLMANLIGSYAIWVQEGL 186
                      *********************99*********************97765577********************************996 PP

>> Hydrolase_like  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   3.2e-09   2.9e-05      21      60 ..     155     194 ..     131     205 .. 0.84

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 3.2e-09
                     GGGEEEEES-TTTHHHHHHHCT-EEEEESSSSS-TTTHHH CS
  Hydrolase_like  21 peevlmiGDrlatDiagAnnaGwksvLVltGvtrpedlee 60 
                      +++ ++GDrl tD+++An +G   + V  G  ++e+ ++
      KHJ34455.1 155 ADQIAVVGDRLMTDVLMANLIGSYAIWVQEGLVAREEISL 194
                     6789***************************999988765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       348  (0.0194099); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1598.08
//
Query:       KHJ34456.1  [L=132]
Description: hypothetical protein EV44_g4300 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00022   21.1   0.3    0.00052   19.8   0.1    1.7  2  Exo_endo_phos_2  Endonuclease-reverse transcriptase


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.1   2.9e-08   0.00052      62     118 ..       2      57 ..       1      58 [. 0.78
   2 ?   -1.2   0.0     0.099   1.8e+03      38      38 ..     100     100 ..      69     123 .. 0.54

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 2.9e-08
  Exo_endo_phos_2  62 efleehslsllnllksgptfkssngsstiDltltsdnlals...kleleeedlgSDHrpi 118
                      e+l+++++s + + + +pt+++    +++Dl+++s++l+ +   +  +++ d++SDH+pi
       KHJ34456.1   2 EWLDAKNISFILEID-TPTHNR---GNVLDLCFSSNSLLAKgctASVQQDLDVTSDHLPI 57 
                      677777777555544.566633...699*************99877788889******99 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.099
  Exo_endo_phos_2  38 D 38 
                      D
       KHJ34456.1 100 D 100
                      2 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 982.54
//
Query:       KHJ34457.1  [L=343]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-18   67.0  15.1     0.0014   19.4   0.0    7.5  7  WD40         WD domain, G-beta repeat
    3.8e-08   33.5   0.1      0.091   13.1   0.0    4.9  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0024   17.4   0.0       0.92    8.9   0.0    2.5  2  DUF5046      Domain of unknown function (DUF5046)
     0.0082   15.5   0.0      0.064   12.6   0.0    2.2  3  WD40_like    WD40-like domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   5.4e-06     0.024       3      38 .]       7      44 ..       5      44 .. 0.75
   2 !   19.4   0.0   3.2e-07    0.0014       1      38 []      62     100 ..      62     100 .. 0.84
   3 !   17.7   0.2   1.1e-06    0.0048       8      38 .]     114     146 ..     105     146 .. 0.80
   4 !    8.2   0.0    0.0011         5       2      38 .]     153     188 ..     152     188 .. 0.81
   5 ?    1.4   0.0      0.15   6.6e+02      10      36 ..     201     226 ..     192     228 .. 0.70
   6 !    6.5   0.1    0.0037        17      16      38 .]     253     279 ..     232     279 .. 0.64
   7 ?    2.2   0.7     0.088   3.9e+02      23      36 ..     328     340 ..     306     341 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 5.4e-06
                EEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40  3 clrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38
                +l  l G  ++v+++   s+ ++++++Gs D+t+r+++
  KHJ34457.1  7 PLAQLLGSnGPVHAVTySSSPSTYILTGSSDRTIRLYN 44
                566666775669999976666666889*88******97 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 3.2e-07
                 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 gq+++++++H+  v sl+  pd+  +as++ D+ v +Wd
  KHJ34457.1  62 GQLIQSYSAHGYeVLSLSIAPDNGSFASAGGDRAVFLWD 100
                 6899******446*****8888888886544*******9 PP

  == domain 3  score: 17.7 bits;  conditional E-value: 1.1e-06
                 ESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS
        WD40   8 tGHss.vtslafspdgawla.sGsdDgtvriWd 38 
                  GHs  ++ + f  dga l+ sG+ D + riWd
  KHJ34457.1 114 NGHSArINTVTFAGDGASLLiSGGFDASARIWD 146
                 378336************7549999*******9 PP

  == domain 4  score: 8.2 bits;  conditional E-value: 0.0011
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++ +lt   +sv+++  s++  w  ++s Dg+vr +d
  KHJ34457.1 153 KPVMVLTEAgDSVSCVLASDSEIW--TSSVDGKVRKYD 188
                 577888877667****99999999..6888****9665 PP

  == domain 5  score: 1.4 bits;  conditional E-value: 0.15
                 SSSEEEEEEETTSSEEEEEETTSEEEE CS
        WD40  10 HssvtslafspdgawlasGsdDgtvri 36 
                   +vt+l+   d++ l+ G+ D  +r+
  KHJ34457.1 201 A-PVTCLRKTIDKKGLLVGGLDSQLRL 226
                 4.6999984444444556999999987 PP

  == domain 6  score: 6.5 bits;  conditional E-value: 0.0037
                 EEEETTSSEEEEE.....ETTSEEEEEE CS
        WD40  16 lafspdgawlasG.....sdDgtvriWd 38 
                 + f    +w++sG     + Dg v +Wd
  KHJ34457.1 253 C-FGGRERWILSGnenieGQDGEVVVWD 279
                 3.577789****95544446*******9 PP

  == domain 7  score: 2.2 bits;  conditional E-value: 0.088
                 SEEEEEETTSEEEE CS
        WD40  23 awlasGsdDgtvri 36 
                 +w ++G+ Dgtv +
  KHJ34457.1 328 QW-CCGGTDGTVTV 340
                 67.57888***965 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.0    0.0053        24      40      82 ..      74     116 ..      59     173 .. 0.58
   2 ?    0.2   0.0      0.21   9.6e+02      56      76 ..     178     198 ..     142     206 .. 0.80
   3 !   13.1   0.0     2e-05     0.091      37      78 ..     199     240 ..     171     251 .. 0.88
   4 !    7.8   0.0   0.00088       3.9      58      91 ..     271     322 ..     267     323 .. 0.94
   5 ?    3.2   0.0     0.025   1.1e+02      35      62 ..     309     338 ..     294     341 .. 0.69

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0053
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksek 82 
                  ev sL+  pd+  +a a  d +v l d+ ++ + + +s ++ +
   KHJ34457.1  74 EVLSLSIAPDNGSFASAGGDRAVFLWDVATAVTTRRFSGNNGH 116
                  5555555555555566666666655555555555555444333 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.21
  ANAPC4_WD40  56 aysdgevrlldaesgkvvhsl 76 
                  +  dg+vr +d+  g++v  +
   KHJ34457.1 178 SSVDGKVRKYDIRMGQIVVDV 198
                  456899999999999988765 PP

  == domain 3  score: 13.1 bits;  conditional E-value: 2e-05
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                   +  v++L+   d k L v+  d+++rl+d e+gk+++s+++
   KHJ34457.1 199 IGAPVTCLRKTIDKKGLLVGGLDSQLRLMDTENGKLLRSYRA 240
                  57889********************************99876 PP

  == domain 4  score: 7.8 bits;  conditional E-value: 0.00088
  ANAPC4_WD40  58 sdgevrlldaesgkvvhslsvksek..................avtclgWge 91 
                  +dgev + d  sgk+v+ ++vk +k                   ++c+ W+e
   KHJ34457.1 271 QDGEVVVWDTLSGKLVERITVKGTKfdgkrkvgrdgkvkdgknVISCIMWKE 322
                  89********************999*****************99******87 PP

  == domain 5  score: 3.2 bits;  conditional E-value: 0.025
  ANAPC4_WD40  35 dkedsevrsLaWkpdgk..lLavaysdgev 62 
                  ++ ++ +++++Wk+dgk    + +  dg+v
   KHJ34457.1 309 KDGKNVISCIMWKEDGKgdQWCCGGTDGTV 338
                  455677899****99872245666666665 PP

>> DUF5046  Domain of unknown function (DUF5046)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.7   0.0    0.0019       8.5      85     122 ..     166     203 ..     119     209 .. 0.70
   2 !    8.9   0.0   0.00021      0.92      91     137 ..     212     257 ..     206     271 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0019
     DUF5046  85 ydvdardktvavyatdgilrvydkttGalltdvevepv 122
                   v a+d ++   ++dg +r yd   G+++ dv  +pv
  KHJ34457.1 166 SCVLASDSEIWTSSVDGKVRKYDIRMGQIVVDVIGAPV 203
                 33456677777778999****************99998 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00021
     DUF5046  91 dktvavyatdgilrvydkttGalltdvevepveeqqsvrvsavgeGy 137
                 +k + v  +d+ lr+ d ++G+ll    ++  e+++  r++++  G 
  KHJ34457.1 212 KKGLLVGGLDSQLRLMDTENGKLLRSYRADCWENKE-FRIWNCFGGR 257
                 567788899**********************99975.7999997775 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.21   9.3e+02       9      28 ..      25      44 ..      17      52 .. 0.75
   2 !   12.6   0.0   1.4e-05     0.064      13      99 ..     131     219 ..     119     231 .. 0.78
   3 ?    0.6   0.0     0.064   2.9e+02      10      35 ..     212     235 ..     202     240 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.21
   WD40_like  9 skkgslilyGgkddkctvlk 28
                s  +++il G+ d ++++++
  KHJ34457.1 25 SSPSTYILTGSSDRTIRLYN 44
                34689**********99986 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 1.4e-05
   WD40_like  13 slilyGgkddkctvlklesl..esvsivesfedSvifvklldddlilvvtlDGtillslleneeevenekieedistvkvi..ddklliGt 99 
                 sl++ Gg d  +++ +++s   + v ++++  dSv  + l +d  i   ++DG++ +++++ ++ +    i   +++ + +  ++ ll+G+
  KHJ34457.1 131 SLLISGGFDASARIWDVKSSsaKPVMVLTEAGDSVS-CVLASDSEIWTSSVDGKVRKYDIRMGQ-IVVDVIGAPVTCLRKTidKKGLLVGG 219
                 68899**********9987522679999******97.7788999********************.44556778888875441133477776 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.064
   WD40_like  10 kkgslilyGgkddkctvlkleslesv 35 
                 kkg  +l+Gg d +++++++e++++ 
  KHJ34457.1 212 KKG--LLVGGLDSQLRLMDTENGKLL 235
                 445..788999999999999888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       269  (0.0150036); expected 358.6 (0.02)
Passed bias filter:                      228  (0.0127168); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2534.03
//
Query:       KHJ34458.1  [L=274]
Description: putative centromere binding protein b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-26   91.7   1.0    1.7e-26   91.7   1.0    2.1  2  HTH_ABP1_N   Fission yeast centromere protein N-terminal doma
    1.1e-17   63.8   3.7    1.8e-17   63.1   2.5    2.0  2  HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain


Domain annotation for each model (and alignments):
>> HTH_ABP1_N  Fission yeast centromere protein N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.7   1.0   1.9e-30   1.7e-26       2      59 ..       5      62 ..       4      64 .. 0.98
   2 ?   -3.2   1.5       0.8   7.1e+03       2      11 ..     138     147 ..     137     148 .. 0.85

  Alignments for each domain:
  == domain 1  score: 91.7 bits;  conditional E-value: 1.9e-30
  HTH_ABP1_N  2 RkaiskeqkkaLRawafqqnprpsqkaliaWFeqeygqkisqstvSeiLSskYayLDd 59
                R++i+ ++++aLRaw+fqq prps+k++iaWFe e+++k+ qst+Se+LS++Y+yLD+
  KHJ34458.1  5 RRSIERRERRALRAWYFQQDPRPSHKECIAWFEGEFHHKLCQSTISESLSDRYSYLDN 62
                899******************************************************8 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.8
  HTH_ABP1_N   2 Rkaiskeqkk 11 
                 R++i+k+q++
  KHJ34458.1 138 RHQIKKKQRR 147
                 9999999997 PP

>> HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.53   4.8e+03       5      15 ..      13      23 ..      11      29 .. 0.78
   2 !   63.1   2.5   2.1e-21   1.8e-17       1      66 []      79     145 ..      79     145 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.53
                 HHHHHHHHHHH CS
  HTH_Tnp_Tc5  5 EkaLleWirql 15
                  +aL+ W+ q+
   KHJ34458.1 13 RRALRAWYFQQ 23
                 68999999776 PP

  == domain 2  score: 63.1 bits;  conditional E-value: 2.1e-21
                  THHHHHHHHHHHHHHC-CT---SCHHHHHHHHHHH.HHSSSCT-TT-S--CHHHHHHHHHTS--XXX CS
  HTH_Tnp_Tc5   1 spelEkaLleWirqlrergipitgelirekAqela.slaadlgepdfkaSkgWldrFkkRhglkrrk 66 
                  +p lE+ L eW + l+++g  +tg l+ +kA+e++ + +++ + p++k+S gWl +Fk Rh++k+++
   KHJ34458.1  79 WPILERILFEWQQSLQQQGNLPTGDLLIAKANEIWpKIPQYRDRPQPKFSAGWLSKFKARHQIKKKQ 145
                  899*********************************9999************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1992.33
//
Query:       KHJ34459.1  [L=1008]
Description: putative signal transduction protein syg1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-94  315.4  34.4    6.2e-94  315.0  34.4    1.1  1  EXS       EXS family
    1.1e-51  177.0  10.8    1.1e-51  177.0  10.8    1.5  2  SPX       SPX domain
  ------ inclusion threshold ------
       0.13   12.4   0.1        2.5    8.2   0.0    2.5  2  CENP-T_C  Centromere kinetochore component CENP-T histone fol


Domain annotation for each model (and alignments):
>> EXS  EXS family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  315.0  34.4     1e-97   6.2e-94       1     331 []     539     865 ..     539     865 .. 0.96

  Alignments for each domain:
  == domain 1  score: 315.0 bits;  conditional E-value: 1e-97
         EXS   1 lplpyrvlllvvlglllwalnlhvlsklginyalifeldprsslsyrqlyelaalllllllllllllllsaevdale.llplllllllllllllplnil 98 
                 l+++y +++l+++++ +++l++ ++++++iny+++fe+dpr++l++r++ +++++ll++l+++++++++++  ++l  ++p++l++++++l+ +pl+il
  KHJ34459.1 539 LFQLYAGYFLALYLFAFFCLDCCIWTRYRINYQFVFEFDPRRTLDWREMANIPSYLLAFLGICMWINFSKIGGQQLFiYYPMILITITAVLIAMPLPIL 637
                 5899*****************************************************************88888655499******************* PP

         EXS  99 yrssrrrflrtllrillaplapvefadfllaDiltSlakvlgDlaltvclyasswseedrkcgss.svvvplllslPyliRfrQclreyrdtkkr.phl 195
                 ++++r +fl++ +r+lla+l+pvef+df+l+D+++Sl++v++++++++cly+++w + +++cgs+ sv++ ++++lP+++R++Qclr+y+dt++  phl
  KHJ34459.1 638 FHRGRMWFLYSNWRLLLAGLYPVEFRDFFLGDMYCSLTYVMANIEVFFCLYIHHWID-PTQCGSThSVLLGFFTALPAVWRALQCLRRYYDTRDMfPHL 735
                 ********************************************************9.9***777466777**************************** PP

         EXS 196 lNalKYatafpvivlsalqrlsksdesestlrvlwllaalvnslysfiWDvtmDWgLlkllksknwflRdellypkkwvYylaivldlvlRftWslkls 294
                 +N++KY+ +++ + + + +r+++++     + +++l+ a++ s+y ++WDv mDW+Ll + + k +flRd + y+++w+Yy a++l+  lRf W+l+l+
  KHJ34459.1 736 VNCGKYIATILFYTTLSRYRINRTN----LYMIIFLVTAALTSVYVSLWDVLMDWSLL-QPNAKVRFLRDVRGYRNTWWYYTAMILNPTLRFDWILYLT 829
                 **********************999....99***************************.5555689********************************* PP

         EXS 295 shlhsiqeselgvfllellEvlRRwvWvffRvEnEhv 331
                 +  h + +s+ + f+++++Ev+RR +Wv+fRvEnEh+
  KHJ34459.1 830 NI-HLLGHSTKVAFVVAFAEVTRRGIWVIFRVENEHC 865
                 55.9999999**************************7 PP

>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.0  10.8   1.8e-55   1.1e-51       1     376 [.       1     438 [.       1     446 [. 0.62
   2 ?   -2.7   0.3       0.7   4.2e+03      76     123 ..     926     971 ..     889     996 .. 0.51

  Alignments for each domain:
  == domain 1  score: 177.0 bits;  conditional E-value: 1.8e-55
         SPX   1 MKFakeLeenlvpEWrdaYldYkqLKKlIkkvqr.ele.slgleaetlrellnrpedskkksse.............rtepstsaaadesgnsaadass 84 
                 M F++ L ++l+pEWr +Y+dYk +K +Ik+++r + + + + ++++  + l + e+s + + +             +           + ++ a  +s
  KHJ34459.1   1 MSFGHNLDRDLIPEWRIKYVDYKEGKRHIKAISRaFNRvATSARNNVGASPLPTRENSRIGPLSslsqrrihhpmfqS----------FDMHQGARGQS 89 
                 77********************************66667777777777777777777777777799754443333330..........33333333333 PP

         SPX  85 sepkdeae...................................................slprrsplsrssrssssygglvssppsansssssddsses 132
                 ++ +++++                                                   +                                       
  KHJ34459.1  90 TRDESSPKhwilspfsanhsklsvtspsadksgktpelsmdniinhaptklitedlvnkD--------------------------------------- 149
                 333333335555555554444433333333333444444444444444455555444431....................................... PP

         SPX 133 npa.................................dssssssssesesssssspsllrrlfs.....esesreeksersyetrplr........aeke 185
                   +                                 +++ ++  ++     +s++s+l+++fs     +  ++ +++ +                ++++
  KHJ34459.1 150 --RqqndpisrdfanmhrkpsifshsivesthitspTGEPNDYFNSRYRMPDSPKSFLSNVFSgggrlSPAESHQTNLD-------IgatdvlrqRQNK 239
                 ..02222333333333333333333333333333322222233334555666777888888885544422233333333.......133333446**** PP

         SPX 186 FferLdseLnkvetFykakeeefterlesLrkqlealrprrikeaeerksdlyrwre..ifglk.sveaqvfessreldrgelse...eardkevseel 278
                 Ff++ ++eL+kve Fyk ke+e+ + l  Lr+ql+++r rr++e +e  ++l+  r   ++ l  +  +++ e+s+ ++++++ +   +  +k++ + +
  KHJ34459.1 240 FFKWINEELEKVEGFYKLKEDEADNLLTLLREQLYEMRTRRVEELAEV-EQLRALRRetEATLDfNARSEALEKSQLSSSWNRFNgifSPIQKSYVKLR 337
                 *******************************************88887.44444444142222225556666666666666544355544455555555 PP

         SPX 279 ekngwikptksklekkrneralekvk......pektlkafldsvrrdylrk....enrvklkkakkklkkafvelYrgLelLKsYqeLNrtAFrKIlKK 367
                 +k  +++  +       n++al+++k       ++    f++++ ++   +    +++v+++kak+klk a++e Yrg+e LKs++++N++AF KI+ K
  KHJ34459.1 338 HKFTSSHIGS-------NSKALQNMKpsvasrLQRSTTMFRGTGDDKTSIRkaqyDDNVPYRKAKRKLKLALLECYRGMEMLKSFSVINQMAFKKINRK 429
                 5444444444.......8899999988776653444444555444444444488899****************************************** PP

         SPX 368 fDKvtalta 376
                 + Kv++  +
  KHJ34459.1 430 YAKVVGSSP 438
                 *****9876 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.7
         SPX  76 gnsaadasssepkdeaeslprrsplsrssrssssygglvssppsanss 123
                 ++  ada+ ++ ++++ +++ ++ +  +s s+ +y++ +s+++++n+ 
  KHJ34459.1 926 TRILADAHLKDFEKKRIRPDGKDGG--NSISDGHYQSDSSDDEEDNDL 971
                 3333333333333332222222222..333333444444433333333 PP

>> CENP-T_C  Centromere kinetochore component CENP-T histone fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   0.0   0.00043       2.5      23      99 ..     218     298 ..     196     307 .. 0.75
   2 ?    0.9   0.0     0.083   4.9e+02      69      90 ..     978     999 ..     976    1003 .. 0.89

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00043
    CENP-T_C  23 asgskaklekealkalekasdkffeqvgeDLeayakHagRKtidesDvilLmkrqrkvtskttlfslaq....ryLPrEll 99 
                 a++++++l+  a ++l +  +kff+ + e+Le      + K  +++ +++L++ q     +  ++ la+    r L rE  
  KHJ34459.1 218 AESHQTNLDIGATDVLRQRQNKFFKWINEELEKVEGFYKLKEDEADNLLTLLREQLYEMRTRRVEELAEveqlRALRRETE 298
                 4557788889999****************************************9655555555554443111155555555 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.083
    CENP-T_C  69 DvilLmkrqrkvtskttlfsla 90 
                 Dv +L+k +r++  +tt + ++
  KHJ34459.1 978 DVAALLKERRRIARETTHEEVV 999
                 9**************9988766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1008 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       861  (0.0480228); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.27s 00:00:01.00 Elapsed: 00:00:00.42
# Mc/sec: 7162.52
//
Query:       KHJ34460.1  [L=876]
Description: putative phospholipase d1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.3e-17   62.6   0.0    1.3e-06   28.3   0.0    3.7  3  PLDc_2    PLD-like domain
    1.9e-13   50.0   1.0      1e-05   25.5   0.1    2.7  2  PLDc      Phospholipase D Active site motif


Domain annotation for each model (and alignments):
>> PLDc_2  PLD-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   2.4e-09   2.2e-05       5     109 ..      84     241 ..      81     253 .. 0.79
   2 !    5.3   0.0    0.0019        17       2      43 ..     432     486 ..     431     532 .. 0.89
   3 !   28.3   0.0   1.5e-10   1.3e-06      80     121 ..     648     691 ..     618     697 .. 0.82

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 2.4e-09
      PLDc_2   5 iksAkksidiatyyf............vsdreildallkaakrgvkvrilldskkd........................................... 48 
                 +++A++si+i    +            + +  + + l++aa+rgvk++i++ ++ +                                           
  KHJ34460.1  84 LEEARESIWILDWWLspelylrrppslNENYRLDRMLIAAANRGVKINIIVYKEVTavltlcsshtkealelhpniavfrhpdhkpvtlpseivstisn 182
                 667777777777666555555555554445555666799*************9777******************************************9 PP

      PLDc_2  49 ...dagavdeaslkelkellleagvevrvfetllgslHaKlylidgktvivGSsNltkrgldln 109
                    ++g  ++  + +lk l +  + ev ++ + +   H+Kl+lidgk++++G+  l +  +d n
  KHJ34460.1 183 fsfNPGNLARVPRDTLKGL-YGVNEEVVLYWA-H---HEKLCLIDGKVAFMGGLDLCYGRWDTN 241
                 9997777777777777777.433333333323.5...****************98888888777 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0019
      PLDc_2   2 iqliksAkksidiatyyf.............vsdreildallkaakrgvkvrill 43 
                 i+ i+++++ ++i +++f             +   +i++++++a ++g++++i++
  KHJ34460.1 432 IDIINQSQHFVYIENQFFitatdddqrpvrnKIGAAIVERVVRAYREGQNYKIII 486
                 789***************9988888877766666679***************996 PP

  == domain 3  score: 28.3 bits;  conditional E-value: 1.5e-10
      PLDc_2  80 gslHaKlylidgktvivGSsNltkrgl..dlnlElnvviedkel 121
                   +H+Kl++ d+++vi GS+Nl++r+   +++ E++vvied++ 
  KHJ34460.1 648 LYIHSKLLIADDRIVICGSANLNDRSQlgSHDSEIAVVIEDPTP 691
                 568***********************9899999********964 PP

>> PLDc  Phospholipase D Active site motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.1   1.2e-09     1e-05       3      28 .]     212     237 ..     210     237 .. 0.97
   2 !   22.6   0.1   9.4e-09   8.4e-05       6      28 .]     651     673 ..     648     673 .. 0.96

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 1.2e-09
                 BEE---EEEETTTEEEEE---SSHHH CS
        PLDc   3 gthHqKivivDdrvafvGgaNLcdgr 28 
                 + hH+K   +D++vaf Gg++Lc+gr
  KHJ34460.1 212 WAHHEKLCLIDGKVAFMGGLDLCYGR 237
                 99**********************98 PP

  == domain 2  score: 22.6 bits;  conditional E-value: 9.4e-09
                 ---EEEETTTEEEEE---SSHHH CS
        PLDc   6 HqKivivDdrvafvGgaNLcdgr 28 
                 H+K +i Ddr+++ G+aNL+d++
  KHJ34460.1 651 HSKLLIADDRIVICGSANLNDRS 673
                 *********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (876 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.24s 00:00:00.87 Elapsed: 00:00:00.40
# Mc/sec: 6621.01
//
Query:       KHJ34461.1  [L=389]
Description: putative fungal specific transcription factor domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-07   29.8  11.1    8.2e-07   29.0  11.1    1.4  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0  11.1   4.6e-11   8.2e-07       2      34 ..     347     379 ..     346     385 .. 0.90

  Alignments for each domain:
  == domain 1  score: 29.0 bits;  conditional E-value: 4.6e-11
                 S-HHHHHCT---STSSSS-HHHHHCTHHHCCCC CS
     Zn_clus   2 aCdnCrkkKvKCdakkPaCsnCkklnleCtfys 34 
                 aC +Cr kK+KCd + P+C +Ckk + +C+ ++
  KHJ34461.1 347 ACLTCREKKIKCDPDYPKCDQCKKFGRTCVRKR 379
                 9****************************9544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       810  (0.0451782); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 3084.89
//
Query:       KHJ34462.1  [L=66]
Description: hypothetical protein EV44_g3454 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (66 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       246  (0.0137208); expected 358.6 (0.02)
Passed bias filter:                      208  (0.0116013); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.21s 00:00:00.53 Elapsed: 00:00:00.36
# Mc/sec: 552.89
//
Query:       KHJ34463.1  [L=73]
Description: hypothetical protein EV44_g3832 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       692  (0.0385967); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 560.21
//
Query:       KHJ34464.1  [L=475]
Description: putative related to aga1 a-agglutinin anchor subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      0.004   17.3   0.1       0.05   13.7   0.0    2.6  3  DUF1153   Protein of unknown function (DUF1153)


Domain annotation for each model (and alignments):
>> DUF1153  Protein of unknown function (DUF1153)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0      0.69   1.2e+04      14      35 ..      85     106 ..      82     109 .. 0.78
   2 ?   -0.2   0.0     0.065   1.2e+03      42      65 ..     241     264 ..     220     272 .. 0.76
   3 !   13.7   0.0   2.8e-06      0.05      17      72 ..     298     353 ..     295     358 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 0.69
                 S-EEETTTS--SS-S---HHHH CS
     DUF1153  14 GsiltradLPppntkrWvarRK 35 
                  +++t+++ P+ +++r    R+
  KHJ34464.1  85 SNAITTSNAPSLDIQRSASNRQ 106
                 5678999999999999777775 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.065
                 HHCTTS-HHHHHHCTTSSHHHHHH CS
     DUF1153  42 vrggLlsleealerYklseeEfas 65 
                 +++ Ll+l+   + Y+l+e E+++
  KHJ34464.1 241 LQNELLQLHLLHRDYGLTEREWRA 264
                 67789999999999****999875 PP

  == domain 3  score: 13.7 bits;  conditional E-value: 2.8e-06
                 EETTTS--SS-S---HHHHHHHHHHHHCTTS-HHHHHHCTTSSHHHHHHHHHHCCT CS
     DUF1153  17 ltradLPppntkrWvarRKaevvaavrggLlsleealerYklseeEfasWqkaver 72 
                 +++++ P+  t+ W    K ++ + +  gL+s+++   rY+  +++f+ W  ++e+
  KHJ34464.1 298 IALEEWPDVGTSGWGLDEKKHIFENILIGLMSTRDPGGRYARVTQNFEDWVDTYEQ 353
                 677899********************************************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (475 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       876  (0.0488594); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 3616.49
//
Query:       KHJ34465.1  [L=518]
Description: hypothetical protein EV44_g4490 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        4.5    5.7  10.3        7.4    5.0  10.3    1.3  1  Macoilin  Macoilin family


Domain annotation for each model (and alignments):
>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0  10.3   0.00042       7.4     204     357 ..     199     349 ..     179     391 .. 0.59

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.00042
    Macoilin 204 keqqlldkeereaeeqlaaakelvevdpvalsknnhslnkkdsslklpeleyrekkksakssrsdskkkhehnesvdsklqekeymenkskskrlskse 302
                  +++l++ ++++ e ++ ++ ++++++p  +++ + +l++    +k ++l +++  + +++s++++  +  ++  ++s+++++++ + ks++    +  
  KHJ34465.1 199 DQNKLIQSAKKDLEAEKETTPNIIKLEPANTTDLSIQLDSDLMGNKFAKLRSKNLGEFSTNSSHHE--DAPKSYIHESRIKSTNFEKAKSHKSITRNLP 295
                 34489********9999****************999999999999999999988755444442222..2222344566666666655555543333333 PP

    Macoilin 303 ssgsesellveesvkskssssssssnknskkasagsagssnssskkhsessksvt 357
                  s+s+s +   e++  +   +sss  +  +  ++ s   snss+++   ss+s+t
  KHJ34465.1 296 RSSSTSRTYN-EKAPPSLPQKSSSRRHIISPPTNFSKPDSNSSTHTSFPSSGSTT 349
                 3333333333.33322222222222222333333333344444444334444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       991  (0.0552736); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.20s 00:00:00.75 Elapsed: 00:00:00.37
# Mc/sec: 4155.38
//
Query:       KHJ34466.1  [L=413]
Description: putative casein kinase ii beta 2 subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       698  (0.0389313); expected 358.6 (0.02)
Passed bias filter:                      530  (0.029561); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 3261.23
//
Query:       KHJ34467.1  [L=532]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0017   18.2   2.5      0.006   16.5   2.5    2.0  1  zf-CCHC_3       Zinc knuckle
  ------ inclusion threshold ------
      0.049   13.6   0.1       0.86    9.6   0.0    2.3  2  DUF3854         Domain of unknown function (DUF3854)
       0.11   12.2   6.3       0.12   12.1   4.6    1.9  2  DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
       0.83    9.8   4.2         11    6.3   0.1    2.4  2  zf-CCHC         Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   2.5   1.3e-06     0.006       6      35 ..     415     456 ..     411     460 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.3e-06
   zf-CCHC_3   6 aCQkClkkGHwtYECkn............agerkytkRpsrt 35 
                 aC +C ++ H+t  Ck+             ++r y++Rpsr+
  KHJ34467.1 415 ACANCASTMHLTINCKAptrcrncggphkSESRNYLARPSRS 456
                 8**************************998999********8 PP

>> DUF3854  Domain of unknown function (DUF3854)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0   0.00019      0.86      15      64 ..      81     135 ..      76     146 .. 0.69
   2 ?    1.1   0.0     0.079   3.6e+02      55      97 ..     300     342 ..     287     347 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00019
     DUF3854  15 itEGakKaaallsag..yvaialpGvtngyreekdeegekiekk...klipelek 64 
                 i+E++k  aa ++a+   ++ia++Gv +  ++++ + +++ ++    +l + +++
  KHJ34467.1  81 IIEAEKRRAAKITANlrTCTIAINGVQMALSTDRADGNKEFSQGlliYLRAAIAQ 135
                 89********99976558***********96655544443333211344444555 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.079
     DUF3854  55 kkklipeleklakegreiliaFDqDtkpktiknVraaikrlgk 97 
                   ++ ++l ++  ++  ++i F +++   t+  ++a+ikr+++
  KHJ34467.1 300 TIEPASDLVTYYIPNVPVTIQFSNNKVFVTKDMIEAEIKRVTQ 342
                 3478899999999**************************9987 PP

>> DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.5   6.5e+03      27      32 .]     387     392 ..     384     392 .. 0.80
   2 ?   12.1   4.6   2.6e-05      0.12       3      24 ..     416     439 ..     415     440 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.5
                     --B--- CS
  DNA_RNApol_7kD  27 ilYKkR 32 
                     ++YK+R
      KHJ34467.1 387 LVYKPR 392
                     79**99 PP

  == domain 2  score: 12.1 bits;  conditional E-value: 2.6e-05
                     -SSS--B--..--SSS----SSS- CS
  DNA_RNApol_7kD   3 CgeCgaevs..lkkgdpiRCkeCG 24 
                     C++C++ +   ++ ++p RC++CG
      KHJ34467.1 416 CANCASTMHltINCKAPTRCRNCG 439
                     *****998766999*********9 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.1    0.0024        11       2      17 ..     415     430 ..     414     431 .. 0.88
   2 ?    4.0   1.3     0.013        57       3       9 ..     435     441 ..     434     441 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0024
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +C nC +++H+  +C+
  KHJ34467.1 415 ACANCASTMHLTINCK 430
                 6*********988886 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.013
                 TSSSSSS CS
     zf-CCHC   3 CynCGep 9  
                 C+nCG+p
  KHJ34467.1 435 CRNCGGP 441
                 *****86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       958  (0.053433); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 4075.21
//
Query:       KHJ34468.1  [L=496]
Description: putative histone acetyltransferase spt10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-15   57.2   2.3    2.8e-15   56.2   2.3    1.5  1  zf-H2C2          H2C2 zinc finger
    1.3e-10   41.3   0.5    2.7e-10   40.2   0.5    1.5  1  Integrase_H2C2   Integrase zinc binding domain
    7.1e-08   32.7   0.0    1.3e-07   31.8   0.0    1.4  1  Acetyltransf_1   Acetyltransferase (GNAT) family
    0.00027   21.3   0.0     0.0053   17.2   0.0    2.3  2  Acetyltransf_7   Acetyltransferase (GNAT) domain
  ------ inclusion threshold ------
      0.012   15.5   0.0      0.031   14.2   0.0    1.6  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
      0.017   15.3   0.0      0.028   14.6   0.0    1.3  1  Acetyltransf_4   Acetyltransferase (GNAT) domain
      0.026   14.5   0.0      0.054   13.5   0.0    1.4  1  FR47             FR47-like protein
      0.028   15.1   0.0       0.12   13.1   0.0    1.8  2  Acetyltransf_3   Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> zf-H2C2  H2C2 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.2   2.3   1.2e-18   2.8e-15       1      39 []     294     332 ..     294     332 .. 0.98

  Alignments for each domain:
  == domain 1  score: 56.2 bits;  conditional E-value: 1.2e-18
     zf-H2C2   1 HkltHlGinkltallarkYhwlgiketvseVissCkaCq 39 
                 H ++H Gink+ta++ +kYhw++iketvs+Vi++C  C+
  KHJ34468.1 294 HLQQHGGINKTTAIINEKYHWVRIKETVSQVIRNCAYCK 332
                 99***********************************97 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.2   0.5   1.2e-13   2.7e-10       4      53 ..     284     332 ..     281     335 .. 0.94

  Alignments for each domain:
  == domain 1  score: 40.2 bits;  conditional E-value: 1.2e-13
  Integrase_H2C2   4 slrkeilkeaHdsagHlGiektlerlrrryyWpgmrkdvkkyvksCetCq 53 
                     + + ei +++H +  H Gi+kt++ + ++y+W +++++v +++++C  C+
      KHJ34468.1 284 QQQYEIARDVHLQ-QHGGINKTTAIINEKYHWVRIKETVSQVIRNCAYCK 332
                     67889*******9.***********************************7 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.8   0.0     6e-11   1.3e-07      16     117 .]      87     190 ..      65     190 .. 0.75

  Alignments for each domain:
  == domain 1  score: 31.8 bits;  conditional E-value: 6e-11
                     HHHHHHHH.HHHHHHSTTCEEEEEEET..TEEEEEEEEEEEETTSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTE.SEEEEEEETTEH CS
  Acetyltransf_1  16 nedaseee.feesfsleaegllvaeed..geliGfisllkipdekggvayieslaVspeyrgkGlGsaLlealeerareegi.kkivlaveednd 106
                     + + + ++ f+ sfs  +e  l+ e+d   e++G+  ++++++ +  ++   +++V p +r++G+G++L ea++ +a + g+ + ++  v+e+n 
      KHJ34468.1  87 WFENFGAVmFFGSFSSCDE--LSEERDwpKEVLGTFYIKPNYPGRASHISNAGFFVTPPARNRGVGRLLGEAYVNWAPKLGYtYSVFNLVFETNI 179
                     4444444444444333333..3333336678************666667777******************************7777547****** PP

                     HHHHHHHHTTE CS
  Acetyltransf_1 107 aairlYeklGF 117
                     a++r +  lGF
      KHJ34468.1 180 ASCRIWDSLGF 190
                     ******77*99 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   2.4e-06    0.0053      12      75 ..     114     191 ..      97     192 .. 0.69
   2 ?    1.5   0.0      0.18   4.1e+02      63      73 ..     230     242 ..     208     242 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 2.4e-06
                     TEEEEEEEEEEES....TCTEE..EEE-GGGTTSSHHHHHHHH...TT..SEEE..EEEEEE..THH.HHHHHHHHTTEE CS
  Acetyltransf_7  12 gkivGfialslld....aeitr..laVdpeyrgkGiGraLlea...ae..kgii..leqlel..nae.kaikfYeklGFe 75 
                     ++++G+ +++++      +i +  ++V p +r++G+Gr L ea    +   g++  +   +l  +++ ++ + + +lGF+
      KHJ34468.1 114 KEVLGTFYIKPNYpgraSHISNagFFVTPPARNRGVGRLLGEAyvnWApkLGYTysV--FNLvfETNiASCRIWDSLGFK 191
                     567788888888888765555588****************99755411445543221..222232224667799999998 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.18
                     H..HHHHHHHHTT CS
  Acetyltransf_7  63 e..kaikfYeklG 73 
                     e  + ikfY k+G
      KHJ34468.1 230 ErfEKIKFYLKHG 242
                     134679******9 PP

>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   1.4e-05     0.031      53     120 ..     132     204 ..     114     207 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.4e-05
  Acetyltransf_10  53 his..llfVdpeyrgqGigkaLleaveeeaekdgikl...eltvnasp.yavpfYeklGFkavgeeqeenGirf 120
                      his   +fV p +r +G+g+ L ea+ + a k g+      l v +++ +  ++  +lGFk++g+ + + ++r 
       KHJ34468.1 132 HISnaGFFVTPPARNRGVGRLLGEAYVNWAPKLGYTYsvfNL-VFETNiASCRIWDSLGFKRIGRIKGAGNLRS 204
                      5651157***********************999988775444.455555***************9988877765 PP

>> Acetyltransf_4  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   1.2e-05     0.028      62     145 ..     118     201 ..     111     214 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.2e-05
  Acetyltransf_4  62 Gyaylgqfkkrak.dwkaelsvylaerdnnkeglgrelidaleqvlkeqnien.llaeiaspnensiqfhkalGFelvgifkkcik 145
                     G++y++ +++ ++ ++ +   +++    ++++g+gr l +a ++ + + ++++  +  ++ +n++s  ++++lGF+  g+ k++++
      KHJ34468.1 118 GTFYIK-PNYPGRaSHISNAGFFVT-PPARNRGVGRLLGEAYVNWAPKLGYTYsVFNLVFETNIASCRIWDSLGFKRIGRIKGAGN 201
                     666666.444444034444556665.789*****************9999987256667999*******************98875 PP

>> FR47  FR47-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   2.4e-05     0.054      29      80 ..     140     193 ..     136     197 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 2.4e-05
                 E-GGG-SSSHHHHHHHHHHHHHHHS-S-EEE..EEETT-HHHHHHHHHHT-EEE CS
        FR47  29 vlpehrrrGlgsrlvkalakeiaergktvll..vvvasNtpsirlyeklGfeki 80 
                 v p +r+rG g++l +a  +   + g+t ++  +v ++N +s+r++ +lGf+ i
  KHJ34468.1 140 VTPPARNRGVGRLLGEAYVNWAPKLGYTYSVfnLVFETNIASCRIWDSLGFKRI 193
                 78999*******************99986553389****************976 PP

>> Acetyltransf_3  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       2.8   6.3e+03     101     116 ..      80      95 ..      76     106 .. 0.81
   2 ?   13.1   0.0   5.2e-05      0.12      80     138 .]     131     191 ..     105     191 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.8
  Acetyltransf_3 101 vralleyafeelgler 116
                     v++++ y+fe+ g+ +
      KHJ34468.1  80 VEQFTAYWFENFGAVM 95 
                     78999****9987665 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 5.2e-05
  Acetyltransf_3  80 e..aelgymlapsfwgkGyateavralleyafeelgler.lvavidkeNeaSirvleklGfe 138
                     +   + g+ + p+++++G+++   +a +++a  +lg+++ ++  + ++N aS r+  +lGf+
      KHJ34468.1 131 ShiSNAGFFVTPPARNRGVGRLLGEAYVNWA-PKLGYTYsVFNLVFETNIASCRIWDSLGFK 191
                     25678899***********************.777788769999*****************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       527  (0.0293937); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3629.94
//
Query:       KHJ34469.1  [L=958]
Description: putative piwi domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-68  230.8   1.3      3e-67  227.0   1.3    2.1  1  Piwi      Piwi domain
    1.5e-20   74.2   0.0    3.7e-20   73.0   0.0    1.7  1  ArgoN     N-terminal domain of argonaute
    3.4e-18   65.8   0.1    7.7e-18   64.6   0.1    1.6  1  PAZ       PAZ domain
    2.9e-15   56.3   0.0      1e-14   54.6   0.0    2.0  1  ArgoL2    Argonaute linker 2 domain
    1.9e-13   49.9   0.1    5.3e-13   48.4   0.0    1.9  2  ArgoL1    Argonaute linker 1 domain
    5.7e-11   42.5   0.0    2.4e-10   40.5   0.0    2.1  2  ArgoMid   Mid domain of argonaute


Domain annotation for each model (and alignments):
>> Piwi  Piwi domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.0   1.3     1e-70     3e-67       2     299 ..     606     892 ..     604     894 .. 0.92

  Alignments for each domain:
  == domain 1  score: 227.0 bits;  conditional E-value: 1e-70
                 EEEEECSSGHHCHHHHHHHHHHTCCCCEEEEEHHHHCTCCHHHHHHHHHHHHHHHHTT-BS-EEESSSTTSSE......EEEEEEEEEECCCSCCCEEE CS
        Piwi   2 ilvilpekkkdkyheikkyletdlgiisqcillktilkrqlkkqtltnvllkinvKlGgknvliveikleldv..sptliiGidishgtagtvdnpsva 98 
                 +l i++   + +y+ +kk +e  + iisqc+   ++ k   + q+++nv++kin+KlGg+      i++++++   ptl+iG+d+sh++ g   + s+a
  KHJ34469.1 606 MLYIIKTRDSFNYERLKKNNEIRFAIISQCMNVAHVVKA--QAQYCSNVAMKINAKLGGTT-SKAIIPGKKEIfpRPTLVIGADVSHPSPGS-PQASMA 700
                 355666688999***************************..57*****************5.4445555556678*****************.9***** PP

                 EEEEEEETSSEEEEEEEEESSCCCCHHHH..HHHHHHHHHHHHHHT.TTT-TTSEEEEEESS....S..S-HHHHHHHHHHHHHHHHHCTTTEEEEEEE CS
        Piwi  99 avvasldkensrylaevstqassqellek..lkeiikellrefkks.skkkkperiivyRdGvseGqfkqvlnsEvkelkealkklkeqyqpkltvivv 194
                 a+++sld + +r++a  +t+ ++ e++ek  +k+ ++ l+ ++ k+  k k+p  i ++RdGvseG+++ vl +E   +k              tv + 
  KHJ34469.1 701 AITVSLDSDACRFAAAAQTNGRRVEMIEKntIKTQMMPLVGQWVKNvGKGKLPMYIYYFRDGVSEGEYSHVLSKE---IK-------------WTVTIC 783
                 ****************************9999***********776267789*********************44...44.............578999 PP

                 ECSCS--EEESESTC....CCEETTTCEEETTEEEEEEEECCEEECCCCEEEEEEEEEEEEEEES..S-CCHHHHHHHHHCTGGTTTTSS-SS-HHHHH CS
        Piwi 195 qkrhhtrfFasdkae....ksqnippGtvvdkkitlpeekdfylcshaglqgtvkPtkytvlvdeaklsadelqsltyklchmyqrstrsvsiPapvyy 289
                 +krhh rfF+++       ++ n +pGt+v+  it+p e+dfylcsha +qgt++P++y+v++dea+ +++++++++y++++ y rst++vsi + vyy
  KHJ34469.1 784 TKRHHLRFFPKERDGnagdRNNNSLPGTLVERDITHPFENDFYLCSHAAIQGTARPVHYHVILDEANCPPNDFHKMIYSMSYQYMRSTTPVSIIPAVYY 882
                 **********9877799999******************************************************************************* PP

                 HHHHHHHHHT CS
        Piwi 290 AhklAkrvrn 299
                 Ah++++r+r 
  KHJ34469.1 883 AHLASARARA 892
                 ******9986 PP

>> ArgoN  N-terminal domain of argonaute
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.0   0.0   1.2e-23   3.7e-20       1     138 []      81     219 ..      81     219 .. 0.77

  Alignments for each domain:
  == domain 1  score: 73.0 bits;  conditional E-value: 1.2e-23
       ArgoN   1 rpiklraNyFkvtslpdktlyhYdveit...kkakrvg...lrriiellleeykkselagkkpayDgrknlysakkLp.kefe.dl.paaeesakkeps 90 
                 ++i++r+N Fkv ++p+k++y+Ydv+i+   +k  +++   + + ++ +l+    +   g+ +++Dg+k ++s++ Lp  +++ dl  +++   + +++
  KHJ34469.1  81 KEITIRVNQFKVMQWPQKDVYQYDVNIGngaEKRGKMKavwQSKTLQMFLR----QASDGSPILWDGNKIAWSSQLLPeLRVTvDLdSEKG---RAPRP 172
                 689************************866522223333444445555553....3344889*****************999999954223...32333 PP

       ArgoN  91 ekrrrksrtfkvtikfaksinlqsLleylrgkq..deasleaiqaLdivl 138
                 +k    ++ + v i+++ksi+++ ++ ylr++   d++ leai++Ld+ +
  KHJ34469.1 173 GK---LPDNCYVVIRKVKSIRMAVIQGYLRKQIpfDNTILEAISFLDHAM 219
                 33...3447********************87779*************986 PP

>> PAZ  PAZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.6   0.1   2.6e-21   7.7e-18      18     137 .]     329     449 ..     311     449 .. 0.90

  Alignments for each domain:
  == domain 1  score: 64.6 bits;  conditional E-value: 2.6e-21
                 ----HHCCCCTTBEEEETTTTS-...CEEEEEEEESS......--TTSEECCTTCT........CECCHHHHCCT---ST-TT--EEEEEES-SS---- CS
         PAZ  18 kdrkkaaealkgliVmtwynnrn...ktyyvadittd......lapsstFpdkdke......neitfaeYfkkkYnieikdqdqplldvdkktesehss 101
                 ++  k+ +++  l ++++++++n   k+yy++++t++       ++++ F++k+++      ++i++++Yfkk Yni+i+  d+pl+ + +        
  KHJ34469.1 329 SEDWKNLQKMARLQFTVKHRGKNddhKVYYIKGFTFSgeqggaHSKNTYFSLKNRKtdppteEKISVYDYFKKTYNINIQFWDFPLVITTR-------- 419
                 444567788999*******9977889*****************9*********97789*********************9999********........ PP

                 EEEEE-CCCCEEESSBCCCCCTCCCHHHHCCCH... CS
         PAZ 102 qkqiLvpElcdihpisasqrykkkllpsilqrlnll 137
                    ++++Elc i    ++qry++kl  s  q+++++
  KHJ34469.1 420 -DGMFPMELCVI---APGQRYNFKL--SPDQTSEMI 449
                 .89*********...**********..999999885 PP

>> ArgoL2  Argonaute linker 2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.6   0.0   3.3e-18     1e-14       1      46 [.     458     503 ..     458     504 .. 0.96

  Alignments for each domain:
  == domain 1  score: 54.6 bits;  conditional E-value: 3.3e-18
      ArgoL2   1 eRkksIlegvkvlgydddpylrafGisidpqmttVpGRvLppPtlk 46 
                 eR +sI++g+++l++d+d yl++fGi+idp++t++++R Lp+P + 
  KHJ34469.1 458 ERIDSIQHGINMLRWDKDQYLKHFGIKIDPNLTQTQARLLPAPDVS 503
                 899****************************************985 PP

>> ArgoL1  Argonaute linker 1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.4   0.0   1.8e-16   5.3e-13       1      51 [.     229     286 ..     229     287 .. 0.90
   2 ?   -3.4   0.0       2.8   8.4e+03       3      21 ..     522     537 ..     521     539 .. 0.68

  Alignments for each domain:
  == domain 1  score: 48.4 bits;  conditional E-value: 1.8e-16
      ArgoL1   1 gvgrsFfsppskqrvdLggggleawrGfyqSvRptqgg.........LllNvDvsntaFy 51 
                 +++rsF+s++ + +++L ++ + a++G+y S+R+++           L++NvD +n++F+
  KHJ34469.1 229 QIKRSFYSQG-NASKKL-DDLIYAMKGVYTSIRLCNPTssvgqpstgLAVNVDAANGTFW 286
                 69********.8899**.77*************77666677888888************* PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.8
      ArgoL1   3 grsFfsppskqrvdLgggg 21 
                 g+ F+ p+   +++L+++g
  KHJ34469.1 522 GKKFYLPN---SEPLKSWG 537
                 78999987...34675555 PP

>> ArgoMid  Mid domain of argonaute
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.0   7.9e-14   2.4e-10       4      72 ..     515     582 ..     513     593 .. 0.88
   2 ?   -3.9   0.0       5.7   1.7e+04      23      35 ..     777     789 ..     775     790 .. 0.84

  Alignments for each domain:
  == domain 1  score: 40.5 bits;  conditional E-value: 7.9e-14
     ArgoMid   4 nGsWdmrgkqFlepk.akikkWAilcfasqrkvkenkledfikqlvkiskdvgisleekpeirkyadder 72 
                  G+Wd+rgk+F+ p+  ++k+W + +   +++++e++ ++fi++lv++++d+g ++e++++ ++ +++++
  KHJ34469.1 515 AGRWDLRGKKFYLPNsEPLKSWGVCIL--GNCCPESTARNFINKLVQVYSDHGGRIENRNPPIYQQTRNE 582
                 6*************9899******995..5*****************************99987777655 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 5.7
     ArgoMid  23 kWAilcfasqrkv 35 
                 kW++ ++++++++
  KHJ34469.1 777 KWTVTICTKRHHL 789
                 8******988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (958 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       468  (0.026103); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.70u 0.27s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 6595.54
//
Query:       KHJ34470.1  [L=770]
Description: putative c2h2 transcription factor swi5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-05   22.9  12.8      0.067   13.7   0.1    3.8  4  zf-H2C2_2   Zinc-finger double domain
    0.00013   22.2  25.4      0.089   13.3   7.9    4.6  4  zf-C2H2     Zinc finger, C2H2 type
  ------ inclusion threshold ------
      0.029   15.2  29.8       0.24   12.3   7.6    5.1  5  zf-C2H2_4   C2H2-type zinc finger
        0.3   10.9  12.6        1.9    8.3   5.6    2.8  2  zf-C2H2_11  zinc-finger C2H2-type


Domain annotation for each model (and alignments):
>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       3.2   1.4e+04       5      18 ..      76      89 ..      75      89 .. 0.86
   2 ?   -0.1   0.0      0.33   1.5e+03      18      25 ..     447     454 ..     445     455 .. 0.87
   3 !   13.2   3.6   2.1e-05     0.096       3      25 ..     460     482 ..     458     483 .. 0.91
   4 !   13.7   0.1   1.5e-05     0.067       1      17 [.     486     502 ..     486     510 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 3.2
   zf-H2C2_2  5 HirkHtgekpyeCp 18
                Hi   t++ ++ Cp
  KHJ34470.1 76 HILRETQQQRLVCP 89
                88889999999998 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.33
   zf-H2C2_2  18 plCdkaFk 25 
                 p C+k+F 
  KHJ34470.1 447 PNCRKRFG 454
                 89*****7 PP

  == domain 3  score: 13.2 bits;  conditional E-value: 2.1e-05
   zf-H2C2_2   3 rrHirkHtgekpyeCplCdkaFk 25 
                 + H  +H g++ ++Cp C+k F+
  KHJ34470.1 460 KSHVQTHLGDRQFQCPCCKKCFV 482
                 78*******************98 PP

  == domain 4  score: 13.7 bits;  conditional E-value: 1.5e-05
   zf-H2C2_2   1 nLrrHirkHtgekpyeC 17 
                 +L+rH + H g kpy C
  KHJ34470.1 486 DLKRHAKIHSGIKPYPC 502
                 69*************99 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.9   0.00019      0.87       5      23 .]     448     466 ..     444     466 .. 0.92
   2 !   13.3   7.9     2e-05     0.089       1      23 []     472     494 ..     472     494 .. 0.97
   3 !    8.8   0.5   0.00053       2.4       5      21 ..     503     519 ..     501     520 .. 0.91
   4 ?   -1.1   0.0      0.74   3.3e+03       5      14 ..     632     641 ..     630     642 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00019
                 TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   5 dCgksFkrksnLkrHirtH 23 
                  C k+F rk+n k+H +tH
  KHJ34470.1 448 NCRKRFGRKENIKSHVQTH 466
                 8*****************9 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 2e-05
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 ++Cp C+k+F r+++LkrH ++H
  KHJ34470.1 472 FQCPCCKKCFVRQHDLKRHAKIH 494
                 89*******************99 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.00053
                 TTTEEESSHHHHHHHHH CS
     zf-C2H2   5 dCgksFkrksnLkrHir 21 
                  Cg sF r + L+rH++
  KHJ34470.1 503 QCGNSFARHDALTRHRQ 519
                 6**************97 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 0.74
                 TTTEEESSHH CS
     zf-C2H2   5 dCgksFkrks 14 
                 +C+ sF ++ 
  KHJ34470.1 632 HCSTSFASSQ 641
                 8*****8875 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2         4   1.8e+04       9      21 ..     392     404 ..     391     405 .. 0.83
   2 ?    8.7   0.4   0.00082       3.7       3      23 ..     444     466 ..     442     467 .. 0.87
   3 ?   12.3   7.6   5.4e-05      0.24       1      23 [.     472     494 ..     472     495 .. 0.96
   4 ?    8.3   0.4    0.0011       4.8       1      21 [.     500     519 ..     500     520 .. 0.89
   5 ?   -0.1   0.1      0.55   2.5e+03       5      14 ..     632     641 ..     631     643 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4
   zf-C2H2_4   9 sFsskkaLlrHlk 21 
                 sFss+++ ++H +
  KHJ34470.1 392 SFSSPRRKSTHRR 404
                 7999999899975 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00082
   zf-C2H2_4   3 Cpi..CgksFsskkaLlrHlkth 23 
                 C +  C+k+F +k+++++H++th
  KHJ34470.1 444 CLYpnCRKRFGRKENIKSHVQTH 466
                 55555*****************9 PP

  == domain 3  score: 12.3 bits;  conditional E-value: 5.4e-05
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 f+Cp C+k F ++++L+rH k h
  KHJ34470.1 472 FQCPCCKKCFVRQHDLKRHAKIH 494
                 89*******************99 PP

  == domain 4  score: 8.3 bits;  conditional E-value: 0.0011
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlk 21 
                 ++C +Cg sF +++aL rH +
  KHJ34470.1 500 YPC-QCGNSFARHDALTRHRQ 519
                 667.9**************86 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 0.55
   zf-C2H2_4   5 iCgksFsskk 14 
                 +C++sF s++
  KHJ34470.1 632 HCSTSFASSQ 641
                 8*****9876 PP

>> zf-C2H2_11  zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   5.6   0.00043       1.9       5      26 ..     472     493 ..     471     494 .. 0.94
   2 ?    5.8   0.6    0.0026        12       8      25 ..     502     519 ..     502     519 .. 0.94

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00043
  zf-C2H2_11   5 cqCleCGlcftSqlsLsRHlfI 26 
                 +qC  C+ cf  q  L+RH  I
  KHJ34470.1 472 FQCPCCKKCFVRQHDLKRHAKI 493
                 6******************887 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0026
  zf-C2H2_11   8 leCGlcftSqlsLsRHlf 25 
                 ++CG  f+ + +L RH++
  KHJ34470.1 502 CQCGNSFARHDALTRHRQ 519
                 69**************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (770 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       814  (0.0454013); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 5241.85
//
Query:       KHJ34471.1  [L=355]
Description: putative mitochondrial ribosomal [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.7e-66  222.5   0.0    3.9e-65  219.1   0.0    2.2  1  Ribosomal_S2  Ribosomal protein S2
  ------ inclusion threshold ------
      0.038   14.0   0.0      0.066   13.2   0.0    1.3  1  SIS_2         SIS domain


Domain annotation for each model (and alignments):
>> Ribosomal_S2  Ribosomal protein S2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  219.1   0.0   4.4e-69   3.9e-65       1     215 []     129     324 ..     129     324 .. 0.91

  Alignments for each domain:
  == domain 1  score: 219.1 bits;  conditional E-value: 4.4e-69
  Ribosomal_S2   1 LLeagvhfGhqtrrwnpkmkpyIygerngihiidlektlaalrraykvvkevaakggkilfvgtkkqakeavkeaakrangyyvnerWlgGtLTNfk 97 
                   L++a++hfGh+ ++wnp +++yIyg r+gihi++le+++a+lrra+kvv++v  +gg++lfvgtkk+++ a+ +aa+ a++y+++erW +Gt+TN +
    KHJ34471.1 129 LMAAQTHFGHHSSLWNPMNQRYIYGIRHGIHIFSLETIAAHLRRAAKVVEDVCYRGGIVLFVGTKKGHAAALVRAAQLAKSYFLFERWQPGTITNGD 225
                   89*********************************************************************************************** PP

  Ribosomal_S2  98 tikksikklkeleeleedgeldltkkealklkkekekleknlggikkmkklPdlvvvldpkkekiavkEakklgipviaivDtnvdpdlvdypIpaN 194
                   +i k   ++k ++ l                +ke e  e +l+     + +Pdlvv+l+p +++i+++E+++++ip+i+++Dtn+dp++v+y Ip+N
    KHJ34471.1 226 QILKMC-RIKAVDPL----------------DKEIEGFEDKLETW--SALKPDLVVCLNPMENYIMLHECRSNNIPTIGVIDTNADPTWVTYTIPGN 303
                   ***974.33444433................44445555555544..4579********************************************** PP

  Ribosomal_S2 195 ddsirsiklilgvladaieeg 215
                   dds+r+ +li+gvl++a+e g
    KHJ34471.1 304 DDSLRASQLIAGVLGRAGEAG 324
                   *****************9876 PP

>> SIS_2  SIS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   7.3e-06     0.066      15      71 ..     164     221 ..     155     257 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 7.3e-06
                 HHSHHHHHHHHHHHHHHHHTT--EEEEES..GGGHHHHHHTSSSTT-BTTEEEE--GGG CS
       SIS_2  15 etqaeaiekaaeliadslenggkvlvfGs..GhSaalaeelaaragglaeferialpal 71 
                 et a+++++aa+++ d + +gg+vl  G+  Gh+aal+  +a  a +++ fer  +  +
  KHJ34471.1 164 ETIAAHLRRAAKVVEDVCYRGGIVLFVGTkkGHAAALVR-AAQLAKSYFLFERWQPGTI 221
                 78899***********************98888888775.4555667777777655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       313  (0.0174578); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2536.57
//
Query:       KHJ34472.1  [L=668]
Description: putative cbs pb1 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-31  108.8   6.0    9.8e-08   32.3   0.0    5.5  5  CBS       CBS domain
    4.5e-08   32.9   0.0    1.2e-07   31.5   0.0    1.8  1  PB1       PB1 domain


Domain annotation for each model (and alignments):
>> CBS  CBS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   3.3e-11     3e-07      12      55 ..     105     148 ..      98     150 .. 0.90
   2 !   32.3   0.0   1.1e-11   9.8e-08       1      47 [.     160     206 ..     160     210 .. 0.93
   3 !   24.4   0.1   3.3e-09     3e-05       7      53 ..     270     315 ..     264     318 .. 0.87
   4 !   18.8   0.1   1.9e-07    0.0017       3      47 ..     331     375 ..     329     382 .. 0.88
   5 ?   -0.1   0.0      0.14   1.3e+03      37      56 ..     541     560 ..     529     561 .. 0.85

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 3.3e-11
                 EETTSBHHHHHHHHHHHTSSEEEEEETTTBEEEEEEHHHHHHHH CS
         CBS  12 vppdttleealelmrekgvsrlPVVdedgklvGivtlrDllral 55 
                 ++p+tt++ea++lm+ k+ ++++V+d+d+++ Gi+t +Dl+  +
  KHJ34472.1 105 IKPNTTVAEAAQLMAAKREDCVLVTDNDDRIAGIFTAKDLAFRV 148
                 89************999989**9***9*************9765 PP

  == domain 2  score: 32.3 bits;  conditional E-value: 1.1e-11
                 HHHHSBSSCEEEETTSBHHHHHHHHHHHTSSEEEEEETTTBEEEEEE CS
         CBS   1 VgdimtrdvvtvppdttleealelmrekgvsrlPVVdedgklvGivt 47 
                 +++imt ++++++ dt+  +al+lm++kg+++lP++de+  + Gi+ 
  KHJ34472.1 160 ISEIMTINPLCARTDTSATDALDLMVRKGFRHLPIMDENQDISGILD 206
                 589*********************************99999999986 PP

  == domain 3  score: 24.4 bits;  conditional E-value: 3.3e-09
                 SSCEEEETTSBHHHHHHHHHHHTSSEEEEEETTTBEEEEEEHHHHHH CS
         CBS   7 rdvvtvppdttleealelmrekgvsrlPVVdedgklvGivtlrDllr 53 
                 +++ tv+  t+++ea+ lm+e++ +++  V ++g + Gi+t +D++ 
  KHJ34472.1 270 SPPTTVSVRTSVREAAALMKENHTTAV-LVQDQGSITGIFTSKDVVL 315
                 5889***************66666677.7899************975 PP

  == domain 4  score: 18.8 bits;  conditional E-value: 1.9e-07
                 HHSBSSCEEEETTSBHHHHHHHHHHHTSSEEEEEETTTBEEEEEE CS
         CBS   3 dimtrdvvtvppdttleealelmrekgvsrlPVVdedgklvGivt 47 
                  +mt+ + ++p ++++  al++m + ++  lPV++  g++vG+v 
  KHJ34472.1 331 RVMTPHPDFAPISMSIQAALRKMHDGHYLNLPVMNATGEIVGMVD 375
                 58999999***************444488**************95 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 0.14
                 ETTTBEEEEEEHHHHHHHHH CS
         CBS  37 dedgklvGivtlrDllrall 56 
                 d+dg  v i t +Dll+a++
  KHJ34472.1 541 DDDGDTVSITTNHDLLEAIM 560
                 89999999*********997 PP

>> PB1  PB1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   1.4e-11   1.2e-07       3      83 ..     480     576 ..     478     577 .. 0.90

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 1.4e-11
                 EEEEEETTEEEEEEEEGSSS-HHHHHHHHHHHHTST................CCSEEEEEEETTSSEEEESSHHHHHHHHHHHHHTSSCCEEEEEEE CS
         PB1   3 dlKlrygggirrelsvssnisfeeLrakvekrfkls................dedvklkYpdedgdlVtitsDeDLeealeearslksktlrlhvqd 83 
                  +K++   g++++++v++ +  +e ++ v ++++ +                d+ ++l+Y d+dgd V+it+  DL ea+  ar   + ++ l+v++
  KHJ34472.1 480 PFKFKAPSGRVHRIKVAPAQGISEIFTAVVSKLGAEieavggaasfengklsDSGFALSYLDDDGDTVSITTNHDLLEAIMLARHNHRDKVDLFVHR 576
                 6777777788888999999999999999999999999999999999999999********************************9777799999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (668 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       806  (0.0449551); expected 358.6 (0.02)
Passed bias filter:                      571  (0.0318478); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.28s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 4605.60
//
Query:       KHJ34473.1  [L=428]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (428 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       493  (0.0274974); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 3066.38
//
Query:       KHJ34474.1  [L=131]
Description: hypothetical protein EV44_g3634 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 961.68
//
Query:       KHJ34475.1  [L=195]
Description: putative nucleoside diphosphate kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-53  180.1   0.0    2.4e-53  179.8   0.0    1.1  1  NDK       Nucleoside diphosphate kinase


Domain annotation for each model (and alignments):
>> NDK  Nucleoside diphosphate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.8   0.0   1.3e-57   2.4e-53       1     135 []      46     180 ..      46     180 .. 0.99

  Alignments for each domain:
  == domain 1  score: 179.8 bits;  conditional E-value: 1.3e-57
                 EEEEEEE-HHHHHTT-HHHHHHHHHHHT-EEEEEEEECE-HHHHHHHTGGGTTSTTHHHHHHHHTSSEEEEEEEESTTHHHHHHHHH--SSTTTSSTTS CS
         NDK   1 ertlvliKPdavkrgligeiisrleekglkivalkmlrlteeqaeehYaehkgkpffeelvefmtsgpvvalvlegedaiekvreliGatnpaeaapgt 99 
                 e+t++ iKPd+v+rglig iisr+e +g+k+va+k++++++e++e+hY++ ++kpff+ l+++m sgp++a+++eg+da+++ r+l+Gatnp  ++pgt
  KHJ34475.1  46 EQTFIAIKPDGVQRGLIGPIISRFEGRGYKLVAIKLVTASKEHLEKHYEDLSSKPFFPGLIQYMGSGPICAMIWEGRDAVKTGRALLGATNPLASQPGT 144
                 89************************************************************************************************* PP

                 HHHHH-SSSTT-SEEE-SSHHHHHHHHHHHSTGGGS CS
         NDK 100 iRadfgvslgeNlvHgSdseesaereiklfFkeeei 135
                 iR+d+++++g+N++HgSds e+a++ei+l+F+++ei
  KHJ34475.1 145 IRGDYAIDVGRNVCHGSDSVENAKKEIALWFDKSEI 180
                 ********************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.21s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1542.44
//
Query:       KHJ34476.1  [L=942]
Description: putative glucosidase ii alpha subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.4e-145  485.9   6.5   1.9e-145  485.4   6.5    1.2  1  Glyco_hydro_31   Glycosyl hydrolases family 31
    1.2e-25   89.6   1.2    4.3e-25   87.8   0.4    2.4  2  Gal_mutarotas_2  Galactose mutarotase-like
    4.8e-06   26.7   1.0    2.1e-05   24.7   1.0    2.1  1  DUF5110          Domain of unknown function (DUF5110)


Domain annotation for each model (and alignments):
>> Glyco_hydro_31  Glycosyl hydrolases family 31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  485.4   6.5  3.2e-149  1.9e-145       1     440 []     345     791 ..     345     791 .. 0.95

  Alignments for each domain:
  == domain 1  score: 485.4 bits;  conditional E-value: 3.2e-149
                     EEEE-SSHHHHHHHHHHHH-------GGGGSEEEE-TT--SHHHHHHHHHHHHHTT--EEEEEESCGGSBTTCCTB-.TTTSS-HHHHHHHHHHT CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31   1 yvflGptpkevvkqyteltGrpalpPrwalGfhqsrygykdeeeveevvdkfreagiPldvivlDidymdkrkdftwdkerFpdpkemvdelhek 95 
                     +vflGpt kev+k y+eltG ++lp+++++G+hq+r++y+++e+v++v +k+ + +iP+dvi+lDi+y d++++ftw++++F dp +m+++l ++
      KHJ34476.1 345 FVFLGPTAKEVIKAYSELTGFTQLPQQFSIGYHQCRWNYNSDEDVKDVDRKMTKYEIPYDVIWLDIEYTDDKQYFTWNPHTFTDPIGMLKQLDKS 439
                     89******************************************************************************************999 PP

                     T-EEEEEE-SEE.E.-TTSHHHHHHHHTTSBECCCCCS.TCEC.TSSEEEEB-TTSHHHHHHHHHHHHHHHCT..CT--EEEE-STTTB.SCCCC CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31  96 gvklvvivdpaiskqeeeyeafdegkekgvflknkdgs.ykgk.wpgstafpDftnpearewwkkelkkflld..lgvdglwiDmnepsnfeegs 186
                     g klv+i+dp+i++++ +y + +e+k+k++ +++kdg+ y+g  wpgs++++D +np a +ww + +k + ++      ++w+Dmneps+f+ ++
      KHJ34476.1 440 GRKLVAIIDPHIKNKD-DYYVSKEMKNKDLSVHSKDGNqYEGWcWPGSSHWIDCFNPTAIKWWISLFKYETFKgsASNLFIWNDMNEPSVFNGPE 533
                     ************7755.888*************99999888889********************9998888876677779*********998777 PP

                     HH.HHCCCTSCETTCC..HHHHCCCHHHHHHHHHHHHHHHHTT..TST-EEEESSEETTGGGCTEEE--S-BSSHHHHHHHHHHHHHHHTTT--S CS
                     xx.xxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 187 ds.eekeaketkaags..hydvhnlygllmakatyeglkekkp..kkrpfiltRstfaGsqryaahWsGdnassWeslresipallsfslsGvpf 276
                     ++ +    k++ + g+  h+d+hn+yg++ ++at+++l e+k+   +rpf ltRs faGsqr +a+W+Gdn++sW++l++s p++++ ++sG+pf
      KHJ34476.1 534 TTmP----KDNLHYGNweHRDLHNIYGMTFQNATFQALLERKKgeIRRPFTLTRSYFAGSQRLGAMWTGDNQASWDHLAISFPMVITNGISGFPF 624
                     6544....34446666889****************998888777799************************************************ PP

                     EEEECT-SG.HCHHHHHHHHHHHHTTSSSEEE--STTSS--SHHHHCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH---SEE-HHHH-TT-CC CS
                     xxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 277 wgaDigGFe.ntteelyaRWvqlGafsPffrnHsskdakrqepwafgeeveeaarkaielRyrLlPylYtlfyeahetglpvvrplflefpedek 370
                      gaD+gGF+ n++++l++RW+q+Gaf+Pffr H++ d++r+ep++ ge++++++++ai+lRy+LlP++Yt+fyea+ +g+p++rp ++++p+d++
      KHJ34476.1 625 AGADVGGFFgNPEKDLLTRWYQAGAFYPFFRGHAHIDTRRREPYLAGEPYTSIITQAIRLRYSLLPVWYTAFYEANINGTPILRPHYIQYPNDKA 719
                     *********9************************************************************************************* PP

                     CCC--S-EEETTT.EEE----STT-SEEEEEE-.SSEEEETTT--EEESSEEEEEE--TTSS-EEEETTEEE CS
                     xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_31 371 tfdiddqfmfGds.LLvaPvleeeatsvevyLP.ggkWydfwtgekyeggqtveltapldeiplfvraGaIi 440
                      f++ddqf++G+s LL +Pv+e++atsve+yLP  + +yd++t eky+g+ +v+++ pl++ipl++++G+Ii
      KHJ34476.1 720 GFALDDQFFVGSSgLLAKPVVEKGATSVEIYLPdSEIYYDYFTYEKYSGKGRVKISSPLEKIPLLMQGGHII 791
                     ***********999*******************777*************999999999999**********9 PP

>> Gal_mutarotas_2  Galactose mutarotase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.8   0.4   7.3e-29   4.3e-25       2      66 .]     235     310 ..     234     310 .. 0.98
   2 ?   -1.3   0.0      0.48   2.9e+03      23      60 ..     595     636 ..     589     638 .. 0.74

  Alignments for each domain:
  == domain 1  score: 87.8 bits;  conditional E-value: 7.3e-29
                      -EEEEEES-SS-SS-TTE.........EEEE-----TS-HCC.CTS-SCEEEEEEEE..TCEEEEEE--SSSEEEE CS
  Gal_mutarotas_2   2 ehvyGlGEkagplnlrgt.........ryrlwntdafgyeaessdplYgsiPfmisl..segyGvfvdnpaetwfD 66 
                      ehvyG++E+a +++l+gt         +yrl+n d+f+y ++s++ lYgsiPfm ++  ++++G+f++n+aetw+D
       KHJ34476.1 235 EHVYGIPEHAHSMSLKGTrggngnhqePYRLYNADVFEYITDSPMTLYGSIPFMQAHkeDSTVGIFWLNAAETWID 310
                      9**********************************************************667*************9 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.48
                      E-----TS-HCC.CTS-SCEEEEEEEE........TCEEEEEE--S CS
  Gal_mutarotas_2  23 lwntdafgyeaessdplYgsiPfmisl........segyGvfvdnp 60 
                      +w+ d+ +    s d l  s P++i+         ++ +G f+ np
       KHJ34476.1 595 MWTGDNQA----SWDHLAISFPMVITNgisgfpfaGADVGGFFGNP 636
                      67777664....3458999999999977777777777777887777 PP

>> DUF5110  Domain of unknown function (DUF5110)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   1.0   3.6e-09   2.1e-05       5      43 ..     812     853 ..     808     873 .. 0.74

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 3.6e-09
                 EEE..--TTSEEEEEEE-SSSSCCCCTBEEEEEEEEEC-S.T CS
     DUF5110   5 dvy..gggegsftlYeDDGetydYekGeyaktkftveadg.g 43 
                  +   ++g+++ ++Y DDGet+dY++G+    +f++++d  +
  KHJ34476.1 812 VIVlsKSGQAQGDVYIDDGETFDYKNGASIYRQFDYKDDTlQ 853
                 4555556778899************************93323 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (942 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       436  (0.0243181); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 6807.18
//
Query:       KHJ34477.1  [L=872]
Description: putative sna41 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.5e-240  799.9   0.0   2.8e-240  799.0   0.0    1.8  1  CDC45     CDC45-like protein


Domain annotation for each model (and alignments):
>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  799.0   0.0  1.6e-244  2.8e-240       1     636 []      26     868 ..      26     868 .. 0.93

  Alignments for each domain:
  == domain 1  score: 799.0 bits;  conditional E-value: 1.6e-244
       CDC45   1 VlilvaldvDalCAariLtsLLkkdliphkivPVsGyedlekaleelvee.....geelrsvvllnlGalvdleellelee........gvevyViDsh 86 
                 V+ilval++DalC++riLt+LL++d+iphki P++Gy dl+ka+++++++     g+++++v++l+ G+lvdl +ll+le+        gvev+V+D++
  KHJ34477.1  26 VIILVALEPDALCGCRILTQLLRRDYIPHKIKPIAGYGDLQKAGHDVIRPmmkscGGNGGVVICLGTGGLVDLGTLLGLESeeeevtycGVEVWVLDAR 124
                 89*****************************************************************************999***************** PP

       CDC45  87 RPwnleNlfgss..............................eekerivvfDDgdieeeleeereayealeeeeesdeedeeeeeeddddeeeeeeeee 155
                 RPw+l+N+fg+                               +++++i+vfDDgdie++l++er++++a+ +++e   ++ +e + ++  ++++e++e+
  KHJ34477.1 125 RPWHLANVFGGVpylpqqnsdgqmasaktpgvergkiqrgykPTNGGIIVFDDGDIEDDLTSERDSFFAIMDMPEIG-DSMDERDTHE--TDSDESSES 220
                 *********999******************************99********************************7.4433343444..444444445 PP

       CDC45 156 deedeeedeeeskkkrksksdeeeesddddersrkrrrse............................................psakklrrqlkkerr 210
                 d++ e+  e++++kkrk    ++ee ++++ r+++rrr++                                            psa+klrr+l+k+rr
  KHJ34477.1 221 DGDFETLIEHRTSKKRKPIYYSDEEGQSESGRPHQRRRRSnssspkhkslnhrpqidlvsmkehsvdqscsrsisppsaqppaqPSARKLRRRLLKLRR 319
                 555555566666778885555566655556666666555559********************************************************* PP

       CDC45 211 kyeavlekyysqgtsygesvsslmYsLaselgredndlLWlAIvGltslelserisae.................ryerlrallrdeVrrlnpss.... 288
                 k+e++l++yy+ g+sy+e++ss+mYsLaselgredndlLW+AIvG+ s+el++r+s +                 r+ ++r+l+rdeVrrlnp +    
  KHJ34477.1 320 KHESILQRYYKLGASYSEPISSMMYSLASELGREDNDLLWMAIVGVESMELYGRSSMGisirtenlssqkgwlgiRGFQIRQLIRDEVRRLNPPDlsds 418
                 *******************************************************999***********************************66**** PP

       CDC45 289 ...........ktekietkarspddtsirlseelrllLlRhWsLydSmlhssYvaskLklWsekGrkrLhkLLAkmGvsLaqakqkYthmdlelkreLr 376
                            k ++i+ +ar+p+dtsi+ls+e+r+lL+RhWsLydSmlhs+Y+++kL++Wse+GrkrLhkLLAkmGvsL q+kq+Yt+md+elkr Lr
  KHJ34477.1 419 sigvnrysspeKINVIPIAARKPTDTSIQLSPEPRFLLIRHWSLYDSMLHSPYLSAKLHIWSENGRKRLHKLLAKMGVSLVQCKQNYTYMDMELKRGLR 517
                 ****99999998889999999****************************************************************************** PP

       CDC45 377 eklekiapeygLddlvye...............sFvrsygyraelsAaDvvealtAlLevgkgveaksekeaeesekeseeeeeeeeeeeaeeeekeee 460
                 +kl k+ ++ygLd+lv+                sFvrs+g+r+++sA+Dv+++++A+Levgk+      ++  e ++   ++ ++ ++  +e+ + e+e
  KHJ34477.1 518 SKLLKYSEMYGLDGLVPAidtggkginstmegwSFVRSWGWRGTFSAQDVGVIVGAILEVGKKPF----TKIFEGSA---DKGDDLANIPDEDGTLESE 609
                 *************************************************************9443....22222222...2234456677788899*** PP

       CDC45 461 ewvknFweAydaLdkknidlLkkglelaqslqraivrtgtsliekkqirtlrafrlavlkdgpdlelFthpaaLtkLalwllealresekekk.k..kk 556
                 ewv +Fw+AydaL+  +i++Lk++l++aq+l+rai+rtg++l+ek+q+ +lrafr++v+kdgpd++lFthp+aLtkLalw++ea++++eke+k k  ++
  KHJ34477.1 610 EWVGRFWDAYDALE--KIEELKAALPTAQHLHRAILRTGIALLEKHQVCHLRAFRMCVVKDGPDVNLFTHPSALTKLALWIGEAIAQQEKESKgKlgNS 706
                 **************..***************************************************************************99559988 PP

       CDC45 557 kkllPlVlasldeergtylVvGvtgkaasggdve................................................................. 590
                  +++PlV+asl+e+rg+y++vG++g++ +++                                                                    
  KHJ34477.1 707 GRGTPLVVASLNETRGIYVIVGTGGGGGEDSV-Gfgdrqatkdkrkrhetmakrkelkqknkeflrkkkeearrlamdneldqedesdtdtsdssssdd 804
                 99***********************8855544.269*************************************************************** PP

       CDC45 591 ..................kNrFglaFqevaeetgarvridsFessvievrkeDlakFlekLslk 636
                                   +N+Fg+aFqev+eet+arvridsFe++v+ev+keDla Fle+Ls+k
  KHJ34477.1 805 sdngdnegdqknyhkgfgRNKFGNAFQEVVEETSARVRIDSFEHCVVEVKKEDLATFLENLSMK 868
                 **************************************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (872 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1297  (0.0723409); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.80u 0.29s 00:00:01.09 Elapsed: 00:00:00.42
# Mc/sec: 6273.06
//
Query:       KHJ34478.1  [L=1088]
Description: putative dna helicase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.3e-71  238.5   0.0    1.4e-70  237.8   0.0    1.3  1  SNF2_N        SNF2 family N-terminal domain
    2.2e-11   44.1   0.0    8.3e-11   42.2   0.0    2.0  1  Helicase_C    Helicase conserved C-terminal domain
      9e-08   32.0   4.2    1.6e-07   31.2   4.2    1.4  1  zf-RING_5     zinc-RING finger domain
    5.7e-06   26.1   2.8    1.2e-05   25.1   2.8    1.6  1  Prok-RING_4   Prokaryotic RING finger family 4
    3.7e-05   23.6   0.0    8.3e-05   22.4   0.0    1.5  1  DEAD          DEAD/DEAH box helicase
     0.0034   17.2   1.4     0.0034   17.2   1.4    1.9  2  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.094   12.6   4.5       0.23   11.4   4.5    1.7  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
       0.14   12.5   3.1       0.34   11.3   3.1    1.7  1  zf-RING_2     Ring finger domain
       0.43   10.5   2.7        1.4    8.8   0.2    2.4  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
        2.6    8.1   6.4        1.7    8.8   2.7    2.5  2  zf-RING_UBOX  RING-type zinc-finger


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.8   0.0   7.7e-74   1.4e-70       1     346 [.     381     747 ..     381     750 .. 0.87

  Alignments for each domain:
  == domain 1  score: 237.8 bits;  conditional E-value: 7.7e-74
                 HHHHHHHHH...........................................HHHHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---...... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...... RF
      SNF2_N   1 yQkeavkwmlkReqnlqdleaalrkllk....tldgekiyvnpatgevveesaeakqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkek...... 89 
                 +Qk+++ +m+++e++  ++   +++l       ++g  +y n++tg   +e++e + +v GGiLaD mGLGKT+ +l+l+++  + e+ + +k      
  KHJ34478.1 381 HQKQGLYFMVHKEKSASETGRHAKNLSLwkeiFSNGTRMYRNVITG---QEELEVPDQVLGGILADMMGLGKTLLSLSLVAHTLDTEALEWAKqtpkpt 476
                 9****************99999998766667788999999999988...5889999*************************777666555544455555 PP

                 .............S-...............EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH-----------------EEEE-HHHHHHHT... CS
                 ......xxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  90 ......krkdtlagp...............tLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydvvittYdvlsreaelq 167
                       ++ ++ + p               tL+v+P s++ +We++i++hv++s+l  ++y+g       n+  +p+ la+yd vittY  +++e + +
  KHJ34478.1 477 davsgsNQTRKGKSPlpklkstplalnaksTLLVSPLSTISNWEDQIKQHVKPSSLSYYIYHGA------NRLRDPNKLAEYDLVITTYGSVASEFNHK 569
                 566655444444444889999999999999*********************************6......455699****************9877766 PP

                 .......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHTHHHHHHHHHHHHHHHHT CS
                 ....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 168 ....kkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkllqrpieaqaekgrsrLlq 262
                         +l++++w+r++lDE+h+++ + ++  +a+s+L++++rw +tGTP+qn l dl +L++fLr++pf+ek  f + + +p++ ++++   +L+ 
  KHJ34478.1 570 ckgkLGSYPLEKINWFRIMLDEAHMIREQSTQQFKAISRLAANRRWAVTGTPVQNRLDDLGALMSFLRIKPFDEKGGFAQFIMTPFKMCDPEILPKLRL 668
                 777667789****************************************************************************************** PP

                 T-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH-HHHHHHHHHHHHH- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 263 llqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskskekilelllelrqacnh 346
                 l+ ++ lrr k+ +  +lPp+  +i+ l++++ er +Y  +  + +++ ++++  ++e +l+ ++    +il+++l+lr +c h
  KHJ34478.1 669 LVDSITLRRLKDRI--ELPPRYDRIVKLDFTESERLIYD-IFAKNANDRMKVIVGQRENSLSGKT--YVHILQSILRLRLICAH 747
                 *************9..9**********************.5555555555555555555554333..366************98 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.2   0.0   4.6e-14   8.3e-11      18     111 .]     933    1028 ..     915    1028 .. 0.93

  Alignments for each domain:
  == domain 1  score: 42.2 bits;  conditional E-value: 4.6e-14
                  EEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTTSSSTT CS
  Helicase_C   18 kilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlprnvtsyiqriGRtgRag 111 
                  k+++f+  + +l+ +++ l ++g+k+++l+g+++   r  +++ f+ + ++  +L++ ++++ G++++ +n V  +++++n++s  q+++R++R g
  KHJ34478.1  933 KSVVFSGWTAHLDLIQIALDENGFKYVRLDGKMNRIARGIAMDTFRdDPTVLvILVSISAGGLGLNLTMANKVYVMEPQYNPASEAQAVDRVHRLG 1028
                  889*******9998999999**************************656666799***************************************86 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   4.2   8.7e-11   1.6e-07       2      44 .]     802     865 ..     801     865 .. 0.87

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 8.7e-11
   zf-RING_5   2 CnkCfekl............skeek...fyltsCgHifCekClkkll.........ekeavCpiCrk 44 
                 C  C+ek+            +   +    y+t+C+Hi+C+ C+ k++         ++  +CpiC++
  KHJ34478.1 802 CLTCSEKFgpsettdpdtdaK---DevfGYMTPCYHIICSGCFPKYKseieeyakyQPIIECPICQQ 865
                 999*****9988777665533...0556*************************************97 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   2.8   6.7e-09   1.2e-05      12      40 ..     828     867 ..     802     872 .. 0.80

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 6.7e-09
  Prok-RING_4  12 ilepCgHlvCkeCfdskdls...........sCPlCqrri 40 
                   + pC H++C  Cf + +++            CP+Cq++i
   KHJ34478.1 828 YMTPCYHIICSGCFPKYKSEieeyakyqpiiECPICQQNI 867
                  478************9977777888999**********98 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   4.6e-08   8.3e-05      23     141 ..     445     603 ..     431     623 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 4.6e-08
                 TTSSHHHHHHHHHHHHHHHS......TTSTS..............................-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTS CS
                 xxxxxxxxxxxxxxxxxxxx......xxxxx..............................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  23 TGsGKTlaflipvlqivyet......kgktg..............................pkalivePtreLaeqtlnnlkkfkkyidlrvlliiggv 85 
                  G GKTl  l  v +++ +t      k++++                              + +l+v+P+  +  +  +++k+  k+ +l++  i++g 
  KHJ34478.1 445 MGLGKTLLSLSLVAHTL-DTealewaKQTPKptdavsgsnqtrkgksplpklkstplalnaKSTLLVSPLSTI-SNWEDQIKQHVKPSSLSYY-IYHGA 540
                 59999999666666555.556877763333366778888888889999999999999999999******9885.6799********9887775.99999 PP

                 SHHHHHHHHHTTCSEEEEEHHHHHHHH...HCTSSH...CTTEEE..EEEETHHHHHHTTTHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxx...xxxxxx..xxxxxxxxxxxxxxxxx RF
        DEAD  86 aardqlskldngvdivvgtpgrlddll...stgkln...lsqvrf..lVlDEadrlldqgfsdf 141
                 ++ ++ +kl +++d+v++t g +++ +    +gkl    l+++++  + lDEa+++ +q+ ++f
  KHJ34478.1 541 NRLRDPNKL-AEYDLVITTYGSVASEFnhkCKGKLGsypLEKINWfrIMLDEAHMIREQSTQQF 603
                 99999****.9**************88777344544555****99889**********955443 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.7   3.1e+03      25      33 ..     801     809 ..     798     814 .. 0.73
   2 !   17.2   1.4   1.9e-06    0.0034      17      48 ..     829     868 ..     820     870 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.7
                 E-HHHHHHH CS
  zf-C3HC4_3  25 lCeeCaekl 33 
                 lC +C+ek+
  KHJ34478.1 801 LCLTCSEKF 809
                 577777664 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 1.9e-06
                 ETTEEEEEE-HHHHHHHHH.........TT-B-TTT--B-- CS
  zf-C3HC4_3  17 llpCgHlvlCeeCaekllk.........rkkkCpiCrrpie 48 
                 + pC H+ +C+ C+ k+++            +CpiC+++i+
  KHJ34478.1 829 MTPCYHI-ICSGCFPKYKSeieeyakyqPIIECPICQQNIR 868
                 67*****.*********999*99998877789******996 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   4.5   0.00013      0.23      12      41 .]     819     863 ..     801     864 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00013
                 E.........E-TTS--B-CHHHHHHHHC....TSSB-...-TTT CS
    zf-C3HC4  12 n........elleCkHsfCskCirkilks....rkkvk...CPlC 41 
                 +         +++C H +Cs C  k+ ++     k+++   CP+C
  KHJ34478.1 819 TdakdevfgYMTPCYHIICSGCFPKYKSEieeyAKYQPiieCPIC 863
                 04555557779*************99999988844444555**99 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   3.1   0.00019      0.34      16      44 .]     825     864 ..     800     867 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00019
   zf-RING_2  16 vl..llpCgHvfhreCl.......erwlrssst.........CPlCr 44 
                 v    +pC H+++  C+       e       +         CP+C+
  KHJ34478.1 825 VFgyMTPCYHIICSGCFpkykseiE-------EyakyqpiieCPICQ 864
                 4443459**********44443333.......1445566699****5 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.2    0.0008       1.4      14      30 ..     828     844 ..     824     850 .. 0.88
   2 ?    0.8   0.2      0.26   4.6e+02       1       9 [.     859     867 ..     858     872 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0008
  zf-C3HC4_2  14 vvtpCgHvfCqkCilrs 30 
                 ++tpC H  C+ C+ ++
  KHJ34478.1 828 YMTPCYHIICSGCFPKY 844
                 79***********9885 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.26
  zf-C3HC4_2   1 kCpiCldml 9  
                 +CpiC++ +
  KHJ34478.1 859 ECPICQQNI 867
                 699998766 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   2.7   0.00094       1.7      13      39 .]     829     861 ..     802     861 .. 0.69
   2 ?    1.4   0.3      0.19   3.4e+02       1       7 [.     860     866 ..     860     871 .. 0.87

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00094
  zf-RING_UBOX  13 vlpCGHtFCreCl...w...elskslegafkCP 39 
                   ++pC H++C+ C    +   e+  + ++ + CP
    KHJ34478.1 829 MTPCYHIICSGCFpkyKseiEEYAKYQPIIECP 861
                   358**********86525677788888888887 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.19
  zf-RING_UBOX   1 CpIClel 7  
                   CpIC++ 
    KHJ34478.1 860 CPICQQN 866
                   ****985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1088 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      402  (0.0224218); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.75u 0.26s 00:00:01.01 Elapsed: 00:00:00.44
# Mc/sec: 7461.68
//
Query:       KHJ34479.1  [L=312]
Description: putative s-adenosyl-l-methionine-dependent methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.9e-17   61.5   0.4      2e-07   30.9   0.1    2.2  2  Methyltransf_16  Lysine methyltransferase
  ------ inclusion threshold ------
      0.015   15.1   0.0      0.028   14.2   0.0    1.4  1  Methyltransf_23  Methyltransferase domain
       0.02   13.9   0.7      0.035   13.1   0.2    1.6  2  Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase


Domain annotation for each model (and alignments):
>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.1   3.3e-11     2e-07      10      97 ..      65     150 ..      56     165 .. 0.75
   2 !   29.1   0.0   1.2e-10   7.2e-07      83     152 ..     166     240 ..     158     266 .. 0.78

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 3.3e-11
  Methyltransf_16  10 eedtgesigrkvWdaavvlvkylekklake.lganelsklsvlELGsGtGlvGlavaell.peakviltDleellellkknielnknalk 97 
                       + +g   g+++W+ + + +++++++++    +a   sk svlELG  +G+ G+ + +l     k iltD+  +++ll++n+e n   ++
       KHJ34479.1  65 SDRGGGTTGAVIWKVSSLFATWISQTSNLLfRNAILNSKSSVLELG--CGISGINALALRsLVEKYILTDQIYVMKLLNQNLEENC--TT 150
                      44556689*****************8755543444567889****7..7777776555532578899****************965..33 PP

  == domain 2  score: 29.1 bits;  conditional E-value: 1.2e-10
  Methyltransf_16  83 ellkknielnkn.alkskvkvevLdWg.....eeleedllekeevDlilaaDcvYledslelLvkvLkellkkesk 152
                      ++ kkni+ ++  + +s++++ +LdW+     ++l  d+ +++ +Dl+la Dc+Y+   +++ v++ ++ +k  s+
       KHJ34479.1 166 NNQKKNIKFSRPiNYTSNISTITLDWEfdditHKL-GDVSQHQGFDLVLACDCIYNDALIQPFVNSCSDACKIRSQ 240
                      56799****8888899**********743332334.7899999**********************99999887776 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   4.8e-06     0.028      15      92 ..      93     218 ..      80     223 .. 0.58

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 4.8e-06
  Methyltransf_23  15 rllpk..lraggrvLdiGcG.tGillevlrengfsvtgvDlspeaveiae........................kakkaqkdqfdeqeaaepqg 81 
                       l+ +  l+++++vL++GcG +Gi++  lr  + ++++ D+  ++  + +                        +                  +
       KHJ34479.1  93 LLFRNaiLNSKSSVLELGCGiSGINALALRSLVEKYILTDQIYVMKLLNQnleencttspaqasnkkkmsknfnN------------------Q 168
                      33433448999*********456******9999999999998888887777777777766655433322222210..................1 PP

  Methyltransf_23  82 .......................................kfdlIvlrevl 92 
                                                              fdl+ + +++
       KHJ34479.1 169 kknikfsrpinytsnistitldwefddithklgdvsqhqGFDLVLACDCI 218
                      22233333344444444444444444444444444444466666666655 PP

>> Pox_ser-thr_kin  Poxvirus serine/threonine protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.2   5.9e-06     0.035     154     209 ..     123     180 ..      99     198 .. 0.84
   2 ?   -1.9   0.0       0.2   1.2e+03     387     433 ..     218     264 ..     211     265 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 5.9e-06
  Pox_ser-thr_kin 154 ltflitlykrvlyllllliqildkqklni..tklskkkllkifeekkdeekfvkllsy 209
                        + + ++   +y++ ll+q l+++ +    ++ +kkk+ k f+++k+++kf + + y
       KHJ34479.1 123 SLVEKYILTDQIYVMKLLNQNLEENCTTSpaQASNKKKMSKNFNNQKKNIKFSRPINY 180
                      4555566777899**********99877665788899****************99987 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.2
  Pox_ser-thr_kin 387 efsealeelilkctkdtidkfrlkvselhsisfleklvtrd.lfskWi 433
                       +++al + ++    d + k r +++   +i  +++ ++ + +f++W+
       KHJ34479.1 218 IYNDALIQPFVNSCSDAC-KIRSQGNVTPTICIIAQQLRSSdVFESWL 264
                      566666666665455555.78999999999999987666544*****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       934  (0.0520944); expected 358.6 (0.02)
Passed bias filter:                      555  (0.0309554); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.20s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 2518.27
//
Query:       KHJ34480.1  [L=166]
Description: putative ubiquitin-conjugating enzyme [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.3e-49  165.8   0.0    4.9e-49  165.6   0.0    1.0  1  UQ_con     Ubiquitin-conjugating enzyme
  ------ inclusion threshold ------
      0.058   13.1   0.0       0.14   11.8   0.0    1.7  1  Prok-E2_B  Prokaryotic E2 family B


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.6   0.0   5.5e-53   4.9e-49       1     138 [.       9     158 ..       9     160 .. 0.98

  Alignments for each domain:
  == domain 1  score: 165.6 bits;  conditional E-value: 5.5e-53
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGGGS............ CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldiLk............ 87 
                 rl +e+k l++++p+gi+a++v++++l  w++li+gpe+tp+egg+F +el+fp+dYPl pP+++f  +++HPnv++sG vc++iL+            
  KHJ34480.1   9 RLFQEYKALSNNPPEGITAGPVSEDDLLLWEALIQGPEGTPFEGGIFPAELKFPKDYPLAPPSMRFLGEVWHPNVYPSGLVCISILHppgpdpnhyeha 107
                 7889*******************99***********************************************************************999 PP

                 TTT--TTSHHHHHHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHH CS
      UQ_con  88 eekWspaltlesvllsiqsLlaepnpesplnkeaakllkkdreeykkkvke 138
                 +e+Wsp +++e++l+s++s+laepn+esp+n+eaak+++++r+ey+++v+e
  KHJ34480.1 108 SERWSPIQSVEKILISVMSMLAEPNDESPANVEAAKQWRDHRAEYENRVRE 158
                 888*********************************************986 PP

>> Prok-E2_B  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.6e-05      0.14      34      78 ..      51      91 ..      31     157 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.6e-05
   Prok-E2_B 34 sggtvdlrlvypdsfpllppavflqdpeqlkllpHintfggaLCl 78
                +gg+++ +l +p+++pl+pp+++   +    + p +++ +g +C 
  KHJ34480.1 51 EGGIFPAELKFPKDYPLAPPSMRFLGEV---WHPNVYP-SGLVCI 91
                799*******************998888...9999999.999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (166 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.35
# Mc/sec: 1410.19
//
Query:       KHJ34481.1  [L=153]
Description: putative yip1 domain family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00017   21.3   0.1    0.00021   21.1   0.1    1.2  1  Yip1      Yip1 domain
  ------ inclusion threshold ------
       0.18   12.2   0.0       0.28   11.5   0.0    1.3  1  DUF1850   Domain of unknown function (DUF1850)


Domain annotation for each model (and alignments):
>> Yip1  Yip1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   0.1   2.3e-08   0.00021      17      58 ..     100     148 ..      80     152 .. 0.73

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 2.3e-08
        Yip1  17 p....ilrapdlallllalltlllgllaslnlgqtlasg...eevqglt 58 
                 +       +pdl+++l++++t++++l++++++  +l++    ++v+++t
  KHJ34481.1 100 NftevMEGNPDLYGPLWIATTVVFILFLGGTINRYLSETngtQFVYDFT 148
                 1555556789*******************99999999886666666555 PP

>> DUF1850  Domain of unknown function (DUF1850)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.2e-05      0.28      12      57 ..      25      72 ..      23      85 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.2e-05
     DUF1850 12 tpveEdyrveg...ggLvleetrfksfGaGlpspaeagervedgwfvlr 57
                t+ +Ed +  +   ++++ ++ + k+ GaGlp+pa+a ++  +++++++
  KHJ34481.1 25 TDLQEDLEFHSsnfNNFTSTTNTRKQPGAGLPPPATADTT-SKKYMIWS 72
                566666665554467899999999**************98.88888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.16s 00:00:00.53 Elapsed: 00:00:00.31
# Mc/sec: 1466.54
//
Query:       KHJ34482.1  [L=638]
Description: putative gtp-binding protein obg [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.2e-42  142.6   1.7    2.8e-31  108.2   2.5    2.3  2  GTP1_OBG   GTP1/OBG
    3.1e-23   82.0   0.0    5.8e-23   81.2   0.0    1.4  1  MMR_HSR1   50S ribosome-binding GTPase
    7.2e-07   28.9   0.0      2e-06   27.4   0.0    1.8  1  FeoB_N     Ferrous iron transport protein B
     0.0067   16.6   0.0      0.098   12.8   0.0    2.4  2  AAA_33     AAA domain
  ------ inclusion threshold ------
      0.032   14.8   0.0      0.082   13.4   0.0    1.7  1  ABC_tran   ABC transporter
      0.066   13.8   0.0       0.21   12.1   0.0    1.9  1  AAA_18     AAA domain
      0.077   13.0   0.1        1.2    9.2   0.1    2.2  2  Dynamin_N  Dynamin family
      0.083   11.9   0.2       0.46    9.4   0.1    2.1  2  MeaB       Methylmalonyl Co-A mutase-associated GTPase MeaB


Domain annotation for each model (and alignments):
>> GTP1_OBG  GTP1/OBG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.2   2.5   1.2e-34   2.8e-31       2      98 ..     161     257 ..     160     282 .. 0.89
   2 !   31.3   0.0   5.9e-11   1.3e-07     100     155 .]     328     384 ..     311     384 .. 0.88

  Alignments for each domain:
  == domain 1  score: 108.2 bits;  conditional E-value: 1.2e-34
                 EEEEEEEE----------BEEETTCCCEEB-S--------EEEEE-TT--SSGCCCTSSEEE-------BTTTB-------EEEEESTTEEEEETTT CS
    GTP1_OBG   2 devkikvkaGkGGdGcvsfrrekyvpkggpdGGdGGkGGdvileadeklntlldlkykkkikAenGenGkgknksGkkgkdlvikvPvgtvvkdeet 98 
                 d+++i+v aG+GG+Gcvsf reky+++g p+GGdGG GG+++++a    ++l++l  +++++A +G+nG+gk k G++gkd+vikvPvgtv+++ e+
  KHJ34482.1 161 DRATITVYAGSGGHGCVSFLREKYINEGPPNGGDGGTGGNIYIQAVWGETSLHKLARRNILRAGRGKNGQGKMKGGERGKDVVIKVPVGTVIREIER 257
                 99******************************************************************************************97443 PP

  == domain 2  score: 31.3 bits;  conditional E-value: 5.9e-11
                 EEEEEE-STT-.EEEEE-----EE-GGGC-CSSCSS--EEEE-----EEEEEEEECS CS
    GTP1_OBG 100 evladltedge.evlvakGGkgGkGnaafksstnraprfaekGeegeereleLelkl 155
                  +++dl++++e  +l+a+G  gG+Gn +f s++  +p+ a+kG+eg++  leLelkl
  KHJ34482.1 328 PIILDLKNPTEtPLLIAAGAVGGLGNPHFVSQSLPMPKCATKGDEGQRIMLELELKL 384
                 57899999665168999**************************************95 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.2   0.0   2.6e-26   5.8e-23       1      90 [.     387     502 ..     387     527 .. 0.79

  Alignments for each domain:
  == domain 1  score: 81.2 bits;  conditional E-value: 2.6e-26
                 EEEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEE.................EEEEECGGCSSHHHHHHHHHHHHHHHHC.TSEEEE CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgke.................ielvDtpGliegaseekglgkaflalee.adlill 81 
                 ++++vG pN+GKStL++al+g+ka+v+++++tT+++n g+  l++++                 ++++D+pGl+++a+ ++glg +fl++ e a ++++
  KHJ34482.1 387 DIGLVGLPNAGKSTLLRALSGSKARVGHWAFTTLQPNIGTAVLDDHKnrpiiqatlengeprtnFTIADIPGLVKDAHLDRGLGVSFLRHVErARVLAF 485
                 589*************************************996653345667777777777777*************************99889***** PP

                 EEETT........TTCS CS
    MMR_HSR1  82 vvdas........eekl 90 
                 v+d+s        ++ +
  KHJ34482.1 486 VIDLSagdailalKSLW 502
                 ***99665554442222 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   9.1e-10     2e-06       3      47 ..     388     432 ..     386     498 .. 0.91

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 9.1e-10
                 EEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEEEEEEETTE CS
      FeoB_N   3 valvGnpnvGkttlfnaltgakqkvgNwpGvtvekkegklklkgk 47 
                 + lvG pn+Gk+tl+ al+g+k +vg w+ +t + + g+  l+++
  KHJ34482.1 388 IGLVGLPNAGKSTLLRALSGSKARVGHWAFTTLQPNIGTAVLDDH 432
                 789*****************************9999888776654 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.23   5.2e+02      99     123 ..     203     227 ..     198     242 .. 0.83
   2 !   12.8   0.0   4.4e-05     0.098       4     111 ..     390     505 ..     388     508 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.23
      AAA_33  99 vrivvvetdeetlkeRlakRaangd 123
                 + +v+ et+  +l++R+  Ra +g+
  KHJ34482.1 203 IQAVWGETSLHKLARRNILRAGRGK 227
                 689****************999764 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 4.4e-05
      AAA_33   4 lvGlpGsGKstlaerllkklg.....avllssdtlrrrlfgtdqqsktdytrvldrlyqilnelarkalsagrnvildat....nlsrrerarflklar 93 
                 lvGlp +GKstl++ l    +     a++  ++++ +++  ++++++  ++++++   ++ n ++++     +++ ld +    +l++ erar+l+++ 
  KHJ34482.1 390 LVGLPNAGKSTLLRALSGSKArvghwAFTTLQPNIGTAVLDDHKNRPIIQATLENGEPRT-NFTIADIPGLVKDAHLDRGlgvsFLRHVERARVLAFVI 487
                 79**************87777788998888899999999999999998777776666655.57777899999999999999999*************** PP

      AAA_33  94 rlgvpvrivvvetdeetl 111
                 +l++ ++i+++++ +++l
  KHJ34482.1 488 DLSAGDAILALKSLWKEL 505
                 **9999999998776665 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   3.7e-05     0.082       5      35 ..     379     409 ..     377     437 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.7e-05
                 EEEEETTSEEEEEESTTSSHHHHHHHHTTSS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   5 slklkegekvaivGenGaGKStLlkllagll 35 
                 +l+lk    +++vG   aGKStLl++l+g  
  KHJ34482.1 379 ELELKLLADIGLVGLPNAGKSTLLRALSGSK 409
                 5677777889******************975 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   9.4e-05      0.21       1      21 [.     388     408 ..     388     451 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 9.4e-05
      AAA_18   1 IlltGtpGvGKttlakeLskr 21 
                 I+l G p +GK+tl ++Ls +
  KHJ34482.1 388 IGLVGLPNAGKSTLLRALSGS 408
                 89****************755 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.1   0.00052       1.2       1      25 [.     388     412 ..     388     424 .. 0.80
   2 ?    1.3   0.0      0.14   3.2e+02     100     119 ..     448     467 ..     423     518 .. 0.75

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00052
                 EEEEEBTTTTHHHHHHHHHTS--S- CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilp 25 
                 i +vG  ++GKS++l aL g++  +
  KHJ34482.1 388 IGLVGLPNAGKSTLLRALSGSKARV 412
                 7899****************98655 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.14
                 S-SEEEEE---B-SSSGTTS CS
   Dynamin_N 100 vkgltlvDlPGldsvnkrdq 119
                 + + t+ D PGl + ++ d 
  KHJ34482.1 448 RTNFTIADIPGLVKDAHLDR 467
                 6789********99887776 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1    0.0002      0.46      31      58 ..     387     414 ..     373     444 .. 0.86
   2 ?   -0.8   0.0      0.26   5.8e+02     171     225 ..     568     632 ..     559     637 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0002
                 EEEEEE-TTSSHHHHHHHHHHHHHCTT- CS
        MeaB  31 vvGltGvPGaGkstlvealglelrrrGk 58 
                  +Gl G+P aGkstl+ al  + +r G+
  KHJ34482.1 387 DIGLVGLPNAGKSTLLRALSGSKARVGH 414
                 59***************99887777665 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.26
                 EEEEE---HHHHHHHHHHHHHHHHHCST........TBTTB--EEEE..EBCCCTBSHHHHHHHH CS
        MeaB 171 iivvnkaDkkeaekaarelraaleleee........kekeWrpkvlk..tsavegeGidelvdai 225
                 ++v  kaD++e+e+    l+  l+  +         ++k W   v+   +sa  +eG +++++ +
  KHJ34482.1 568 LVVATKADLPETEQNYIRLKDYLKGVSDgleehpsqQKKFWAGTVMAipVSAISNEGTEKVTKCM 632
                 67889999888888877777777655544555566558889988865227999999999887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (638 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       408  (0.0227564); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.60u 0.30s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 4271.65
//
Query:       KHJ34483.1  [L=153]
Description: putative ubiquitin-60s ribosomal protein l40 fusion protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-33  114.5   0.4    2.1e-33  113.9   0.4    1.3  1  ubiquitin       Ubiquitin family
    5.2e-32  109.5  11.3    8.3e-32  108.9  11.3    1.3  1  Ribosomal_L40e  Ribosomal L40e family
    2.2e-14   53.0   0.3    3.8e-14   52.3   0.3    1.3  1  Rad60-SLD       Ubiquitin-2 like Rad60 SUMO-like
    3.8e-05   24.1   0.1    0.00014   22.2   0.1    1.8  1  Ubiquitin_2     Ubiquitin-like domain
     0.0057   16.6   0.0     0.0085   16.0   0.0    1.4  1  TBK1_ULD        TANK binding kinase 1 ubiquitin-like domain
     0.0065   16.8   0.1       0.01   16.2   0.1    1.3  1  Ubiquitin_5     Ubiquitin-like domain
  ------ inclusion threshold ------
       0.01   15.9   0.0      0.022   14.9   0.0    1.6  1  Rad60-SLD_2     Ubiquitin-2 like Rad60 SUMO-like
      0.038   14.6   0.0      0.044   14.3   0.0    1.3  1  DUF2407         DUF2407 ubiquitin-like domain
       0.12   11.0   0.1       0.48    9.0   0.1    1.7  2  Plexin_cytopl   Plexin cytoplasmic RasGAP domain
       0.12   12.9   0.0       0.16   12.5   0.0    1.2  1  HATPase_c       Histidine kinase-, DNA gyrase B-, and HSP90-l
       0.15   12.1   0.7          9    6.4   0.0    2.2  2  Ubiquitin_4     Ubiquitin-like domain


Domain annotation for each model (and alignments):
>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.9   0.4   1.3e-36   2.1e-33       2      72 .]      29      99 ..      29      99 .. 0.99

  Alignments for each domain:
  == domain 1  score: 113.9 bits;  conditional E-value: 1.3e-36
                EEEETTSEEEEEEEETTSBHHHHHHHHHHHHTSSGGGEEEEETTEEE-TTSBHGGHTTSTTEEEEEEESSC CS
   ubiquitin  2 tvktldgkkitleveesdtveelKekiaekegipaeqqrLiysGkvLedertleeygiqdgstlhlvlrlr 72
                +vktl+gk+itleve+sdt++++K+ki++kegip++qqrLi++Gk+Led rtl++y+iq++stlhlvlrlr
  KHJ34483.1 29 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 99
                8*******************************************************************986 PP

>> Ribosomal_L40e  Ribosomal L40e family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.9  11.3   5.1e-35   8.3e-32       1      50 []     103     152 ..     103     152 .. 0.99

  Alignments for each domain:
  == domain 1  score: 108.9 bits;  conditional E-value: 5.1e-35
  Ribosomal_L40e   1 iepsLrqLAqKyncdKmiCrkCYArlpprAtnCrkkkCghsnnlrpKKkl 50 
                     iepsL++LA+KyncdKmiCrkCYArlpprA+nCrkkkCgh+n+lrpKKk+
      KHJ34483.1 103 IEPSLKALASKYNCDKMICRKCYARLPPRAVNCRKKKCGHTNQLRPKKKI 152
                     8***********************************************96 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   0.3   2.3e-17   3.8e-14       4      72 .]      29      96 ..      29      96 .. 0.98

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 2.3e-17
                EEEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEEX CS
   Rad60-SLD  4 ilkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvvi 72
                ++k+ +gk+++++V+++ t+ +++ + ++k+gip+ +++rLiF G++L++  t+ d+ i++++t+++v+
  KHJ34483.1 29 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 96
                699********************************.******************************986 PP

>> Ubiquitin_2  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.1   8.6e-08   0.00014      17      80 ..      39      94 ..      26      95 .. 0.86

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 8.6e-08
                 EEEEETTSBHHHHHHHHHHHH---TTCEEEEEE.-SSSSEEECSSGCCSBCCCCT--TTEEEEE CS
  Ubiquitin_2 17 errfsksltieelKekLelitGtspasmrLqlyddkkdnevsklddddalLgsYgvkdgmrihV 80
                 +  +++s+ti+++K+k++   G++p+++rL +          k  +d ++L++Y+++  +++h 
   KHJ34483.1 39 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA--------GKQLEDGRTLSDYNIQKESTLHL 94
                 5667899************************99........5667899*********9999995 PP

>> TBK1_ULD  TANK binding kinase 1 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   5.2e-06    0.0085      19      53 ..      42      76 ..      22      96 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 5.2e-06
    TBK1_ULD 19 ihpyntvaifqeevakqTkiaaekQellfeghrll 53
                +++ +t++++  +++++  i++++Q l+f g++l 
  KHJ34483.1 42 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 76
                6789****************************973 PP

>> Ubiquitin_5  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.1   6.2e-06      0.01      32      92 ..      36      97 ..      20     101 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 6.2e-06
  Ubiquitin_5 32 kkklletkLdvtgkelvskiaeefglkensiKlilngklleldktLeeQgvknnskv.mvLk 92
                 k  +le++ + t +++ +ki ++ g+  ++ +li  gk+le ++tL + +++++s + +vL+
   KHJ34483.1 36 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLhLVLR 97
                 4556777777788899999999999999***********************99987546666 PP

>> Rad60-SLD_2  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   1.4e-05     0.022      13      88 ..      36      97 ..      26     121 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.4e-05
                 -EEEEEEEETT-BHHHHHHHHHHHS-TT-SSS--SCCCEEEEETTEEE-TTSBCCCCS-TTTTTTTS-EEEEEEE- CS
  Rad60-SLD_2 13 sDigpvkfsdaatvaelkekviaqWPkdkeekpksvndlklilaGkiLennktlkelrlplgevkggvtvmHvvvr 88
                 + +  ++ ++++t++++k+k+     +dke  p  +++ +li aGk Le+ +tl++++++        +++H+v+r
   KHJ34483.1 36 K-TITLEVESSDTIDNVKAKI-----QDKEGIP--PDQQRLIFAGKQLEDGRTLSDYNIQKE------STLHLVLR 97
                 5.5556677777888888887.....4555533..34559****************955433......45777765 PP

>> DUF2407  DUF2407 ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   2.7e-05     0.044      14      67 ..      38      87 ..      26     151 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.7e-05
     DUF2407 14 leLdipdpntttvagLkqliRerlpaelasrrLrLIyaGrlLedttslasslkl 67
                ++L+++  ++ t+ ++k  i ++    +   + rLI+aG+ Led  +l++   +
  KHJ34483.1 38 ITLEVE--SSDTIDNVKAKIQDKE--GIPPDQQRLIFAGKQLEDGRTLSDYNIQ 87
                566776..7789999999999987..67777789**************975443 PP

>> Plexin_cytopl  Plexin cytoplasmic RasGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.1   0.00029      0.48     185     223 ..      19      57 ..       5      61 .. 0.91
   2 ?   -0.0   0.0      0.16   2.7e+02     271     290 ..      79      98 ..      64     146 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00029
                    ---EEEEEEEE-------EEEEEEETT-BHHHHHHHHHH CS
  Plexin_cytopl 185 eyktltlkvvveeeeesekvevkvldcDtitQvkeKild 223
                    e+++lt ++++ ++   ++++++v + Dti+ vk Ki d
     KHJ34483.1  19 EFRELTKHISFVKTLTGKTITLEVESSDTIDNVKAKIQD 57 
                    78999999999999899*******************976 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.16
                    -BTTTTT--TTEEEEEE-T. CS
  Plexin_cytopl 271 nTlahYkvsdgavlalvkkq 290
                     Tl++Y+++ +++l+lv + 
     KHJ34483.1  79 RTLSDYNIQKESTLHLVLRL 98 
                    6999******9999998775 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   9.5e-05      0.16       5      63 ..      15      76 ..      11      98 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 9.5e-05
                HHHHHHHHHHHHHHHHHS.TTTEEEEEEEEEE..TEEEEEEEESSSSSTTHHHTGTCS.TTCH CS
   HATPase_c  5 rLrqiisnlvdNavkfat.kageieveikase..ddlvisveDnGiGipkedlkklfe.kfsq 63
                +L++ +++l ++    +t ++++i++e+++s+  d+++ +++D   Gip++++ ++f+ k  +
  KHJ34483.1 15 FLYEEFRELTKHISFVKTlTGKTITLEVESSDtiDNVKAKIQD-KEGIPPDQQRLIFAgKQLE 76
                55555556555544333448889999999755889********.78***********977666 PP

>> Ubiquitin_4  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.1      0.03        48       5      32 ..      30      57 ..      26      61 .. 0.89
   2 ?    6.4   0.0    0.0055         9      58      86 ..      68      95 ..      64      98 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.03
  Ubiquitin_4  5 vkkldgeslevvvkqnatvkdLkkaier 32
                 vk l g+++ ++v+++ t+ ++k+ i+ 
   KHJ34483.1 30 VKTLTGKTITLEVESSDTIDNVKAKIQD 57
                 6778899*****************9997 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0055
  Ubiquitin_4 58 LsfegekLkddkaklkeygirnkselsFv 86
                 L+f g++L+ d  +l++y i+++s+l+ v
   KHJ34483.1 68 LIFAGKQLE-DGRTLSDYNIQKESTLHLV 95
                 889999986.6789************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       820  (0.045736); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1151.01
//
Query:       KHJ34484.1  [L=498]
Description: putative nuclear segregation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0023   17.6   0.3      0.025   14.3   0.0    2.5  2  DUF3945       Protein of unknown function (DUF3945)
     0.0074   16.5   7.1     0.0074   16.5   7.1    5.3  7  ABC_tran_CTD  ABC transporter C-terminal domain


Domain annotation for each model (and alignments):
>> DUF3945  Protein of unknown function (DUF3945)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1     0.076   6.8e+02      25      41 ..      17      33 ..       2      34 .. 0.77
   2 !   14.3   0.0   2.8e-06     0.025      11      43 ..     321     352 ..     321     356 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.076
     DUF3945 25 ripdeikgvkLteeqkq 41
                ++ +e+++ +L +++k+
  KHJ34484.1 17 KPDEEVYKARLKKAEKE 33
                44599**********97 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 2.8e-06
     DUF3945  11 keTnelvylradeiripdeikgvkLteeqkqdL 43 
                 k+T +l++l+ ++i ip eikgv++ +++  d+
  KHJ34484.1 321 KTTSKLHALPMRQIDIP-EIKGVRIAKKEVDDY 352
                 68***************.*********998775 PP

>> ABC_tran_CTD  ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1      0.81   7.2e+03      26      55 ..      47      76 ..      45      83 .. 0.58
   2 ?    2.3   0.1     0.023   2.1e+02      41      58 ..     116     133 ..      85     140 .. 0.56
   3 ?    2.0   0.0     0.028   2.5e+02      11      26 ..     119     134 ..     111     159 .. 0.70
   4 !   16.5   7.1   8.3e-07    0.0074      10      62 ..     162     214 ..     142     221 .. 0.88
   5 ?   -3.9   3.1         2   1.8e+04      36      36 ..     244     244 ..     214     276 .. 0.53
   6 ?   -3.2   5.6       1.2   1.1e+04       6      40 ..     261     292 ..     257     305 .. 0.72
   7 ?    1.5   1.0      0.04   3.6e+02       8      25 ..     426     443 ..     412     480 .. 0.46

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.81
  ABC_tran_CTD 26 eleaeladpelysdp..eklaelsaeleelea 55
                  +le+++++ +    p  ++ +el ++l+++++
    KHJ34484.1 47 KLENAISSSS--DSPlaKRRTELINQLKDIRE 76
                  5666666664..33344555666666666655 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.023
  ABC_tran_CTD  41 eklaelsaeleeleaeLe 58 
                   + + +l +e+++l ++++
    KHJ34484.1 116 KSVDDLEREIDRLHKQIN 133
                   555555555555555554 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.028
  ABC_tran_CTD  11 eeleaeIeaLEeeiae 26 
                   + le+eI++L ++i +
    KHJ34484.1 119 DDLEREIDRLHKQINT 134
                   5566667666666654 PP

  == domain 4  score: 16.5 bits;  conditional E-value: 8.3e-07
  ABC_tran_CTD  10 leeleaeIeaLEeeiaeleaeladpelysdpeklaelsaeleeleaeLeelye 62 
                   +ee  + I+a  + i++l ++l+dpe  + +ek ++++ael++++ae +e+y 
    KHJ34484.1 162 FEESQKNIDAKRKVIKQLREQLEDPESKALSEKYNKIQAELDAVKAEQDEMYN 214
                   67888999******************65555*******************997 PP

  == domain 5  score: -3.9 bits;  conditional E-value: 2
  ABC_tran_CTD  36 l 36 
                   +
    KHJ34484.1 244 Y 244
                   2 PP

  == domain 6  score: -3.2 bits;  conditional E-value: 1.2
  ABC_tran_CTD   6 eqreleeleaeIeaLEeeiaeleaeladpelysdp 40 
                     re ++ e+e  +LE+++a  ++ l +++   d 
    KHJ34484.1 261 RARERKKAEEERFQLEKKKARAQQILDEAS---DK 292
                   567777888888899999999999888764...44 PP

  == domain 7  score: 1.5 bits;  conditional E-value: 0.04
  ABC_tran_CTD   8 releeleaeIeaLEeeia 25 
                   r +++  +e e+LE+e++
    KHJ34484.1 426 RNIANARKEVERLETEQS 443
                   233344555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (498 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3315  (0.184896); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                        30  (0.00167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.96u 0.32s 00:00:01.28 Elapsed: 00:00:00.51
# Mc/sec: 2943.12
//
Query:       KHJ34485.1  [L=210]
Description: putative ankyrin repeat containing protein yar1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-20   72.6   3.3    1.4e-10   41.6   0.2    2.3  3  Ank_2     Ankyrin repeats (3 copies)
    2.1e-10   40.7   0.5    7.1e-07   29.4   0.1    2.4  2  Ank_5     Ankyrin repeats (many copies)
    5.7e-10   38.6   0.1    3.5e-05   23.9   0.0    3.4  4  Ank_3     Ankyrin repeat
    6.3e-10   39.4   2.2    1.9e-05   25.1   0.9    2.6  3  Ank_4     Ankyrin repeats (many copies)
    4.4e-09   36.4   0.1    2.1e-06   27.9   0.0    3.2  3  Ank       Ankyrin repeat


Domain annotation for each model (and alignments):
>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0   8.1e-05      0.29      43      73 ..      39      71 ..      11      81 .. 0.71
   2 !   41.6   0.2   3.9e-14   1.4e-10      15      82 ..      40     124 ..      29     125 .. 0.73
   3 !   32.0   0.0     4e-11   1.4e-07      24      76 ..      92     152 ..      78     159 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 8.1e-05
       Ank_2 43 klLleh.ad.ndgrtpLhyAarsghleivklLl 73
                  Ll+   d n+g+ +Lh+Aa +gh ++++  +
  KHJ34485.1 39 YELLQVaKDeNSGNGILHMAAANGHCDFIQKIC 71
                344443444788999999999999999887666 PP

  == domain 2  score: 41.6 bits;  conditional E-value: 3.9e-14
       Ank_2  15 lLl.egadpnkngktaLhyAakngnleivklLleh.................adndgrtpLhyAarsghleivklLlekgadinlk 82 
                  Ll   +d n  g+ +Lh Aa ng+ ++++ +++                  ++  g+tpLh+Aa +g+l++v++L+e+ga++++ 
  KHJ34485.1  40 ELLqVAKDEN-SGNGILHMAAANGHCDFIQKICKSlsqpspqntimlslmnaQNLAGNTPLHWAALNGNLNTVQVLMEQGAEPTIS 124
                 3443333434.7889*********99988888873344555456666664433355**************************9986 PP

  == domain 3  score: 32.0 bits;  conditional E-value: 4e-11
       Ank_2  24 k.ngktaLhyAakngnleivklLleh......adndgrtpLhyAarsghleivklLlek.g 76 
                 +  g+t+Lh+Aa ngnl++v+ L+e+       ++ g+ +++ A  ++  ++v++ l+  g
  KHJ34485.1  92 NlAGNTPLHWAALNGNLNTVQVLMEQgaeptiSNKMGHDAIYEAELNDKKQVVEWVLKEgG 152
                 2468999999999999999999999776677666999999999999988999999994425 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   0.0   0.00047       1.7      14      36 ..      49      71 ..      42      74 .. 0.86
   2 !   29.4   0.1     2e-10   7.1e-07      10      51 ..      89     131 ..      86     134 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00047
       Ank_5 14 gggntpLhvAakygaadvvrlLl 36
                + gn +Lh+Aa +g++d +++++
  KHJ34485.1 49 NSGNGILHMAAANGHCDFIQKIC 71
                667889***********999876 PP

  == domain 2  score: 29.4 bits;  conditional E-value: 2e-10
       Ank_5  10 nrldgggntpLhvAakygaadvvrlLlargadlnltdsrG.lt 51 
                 n+++  gntpLh+Aa +g+++ v++L++ ga +++ +++G + 
  KHJ34485.1  89 NAQNLAGNTPLHWAALNGNLNTVQVLMEQGAEPTISNKMGhDA 131
                 899***********************************99665 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.8   6.3e+03      10      27 ..      15      36 ..      11      40 .. 0.53
   2 !   10.5   0.0   0.00022      0.79       2      22 ..      51      71 ..      50      78 .. 0.83
   3 !   23.9   0.0   9.8e-09   3.5e-05       2      29 ..      95     121 ..      94     123 .. 0.92
   4 ?   -1.8   0.0       2.3   8.1e+03      12      26 ..     138     152 ..     132     156 .. 0.68

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.8
       Ank_3 10 arsgnle.i....vkfLlenkga 27
                ar g+++      ++++l+   +
  KHJ34485.1 15 ARIGDYDeFksleIELCLR-EKI 36
                5666663212223888888.455 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00022
       Ank_3  2 GetpLhlAarsgnleivkfLl 22
                G+ +Lh+Aa +g+++ ++ ++
  KHJ34485.1 51 GNGILHMAAANGHCDFIQKIC 71
                7889**********9777655 PP

  == domain 3  score: 23.9 bits;  conditional E-value: 9.8e-09
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgadv 29 
                 G+tpLh+Aa++gnl+ v+ L e  ga++
  KHJ34485.1  95 GNTPLHWAALNGNLNTVQVLME-QGAEP 121
                 9*************99******.89987 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 2.3
       Ank_3  12 sgnleivkfLlenkg 26 
                 +++  +v++ l++ g
  KHJ34485.1 138 NDKKQVVEWVLKEGG 152
                 344459999999665 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.1   0.00083         3      31      52 ..      47      68 ..      29      70 .. 0.85
   2 !   25.1   0.9   5.3e-09   1.9e-05       2      54 ..      52     114 ..      51     115 .. 0.77
   3 !   20.4   0.0   1.6e-07   0.00056       2      53 ..      96     146 ..      95     148 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00083
       Ank_4 31 dnrsGetalhiAakrgnveilk 52
                d +sG+  lh+Aa +g+ ++++
  KHJ34485.1 47 DENSGNGILHMAAANGHCDFIQ 68
                5678999**********99876 PP

  == domain 2  score: 25.1 bits;  conditional E-value: 5.3e-09
       Ank_4   2 ltaLhyaaisgrlel....vrlLlekgad..........inaqdnrsGetalhiAakrgnveilklL 54 
                 +++Lh+aa+ g+ +     +++L +               naq n  G+t+lh Aa++gn++ ++ L
  KHJ34485.1  52 NGILHMAAANGHCDFiqkiCKSLSQ---PspqntimlslMNAQ-NLAGNTPLHWAALNGNLNTVQVL 114
                 6789999997776661222444443...24668999999****.*******************9987 PP

  == domain 3  score: 20.4 bits;  conditional E-value: 1.6e-07
       Ank_4   2 ltaLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAakrgnveilkl 53 
                 +t+Lh+aa  g+l +v+ L e+ga++  + n+ G  a++ A ++ +++++++
  KHJ34485.1  96 NTPLHWAALNGNLNTVQVLMEQGAEPTIS-NKMGHDAIYEAELNDKKQVVEW 146
                 89***********************9998.9988888888888888888887 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.0     0.021        76       5      19 ..      54      72 ..      50      92 .. 0.77
   2 !   27.9   0.0   5.8e-10   2.1e-06       2      31 ..      95     125 ..      94     126 .. 0.94
   3 ?    0.5   0.0      0.27   9.5e+02      11      28 ..     137     156 ..     128     159 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.021
                HHHHHHHHTT....HHHHH CS
         Ank  5 PLHlAatngk....kriik 19
                 LH+Aa ng+      i+k
  KHJ34485.1 54 ILHMAAANGHcdfiQKICK 72
                69**998998666655555 PP

  == domain 2  score: 27.9 bits;  conditional E-value: 5.8e-10
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnlnald 31 
                 GnTPLH+Aa ng+++ ++ L  +GA++++ +
  KHJ34485.1  95 GNTPLHWAALNGNLNTVQVLMeQGAEPTISN 125
                 9********************99****9876 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.27
                 HHTTHHHHHHHH.TT.TSTT CS
         Ank  11 tngkkriiklLL.hG.Anln 28 
                  n+kk+++++ L  G  +l+
  KHJ34485.1 137 LNDKKQVVEWVLkEGgKSLD 156
                 6899****987755435665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       689  (0.0384294); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.36
# Mc/sec: 1745.20
//
Query:       KHJ34486.1  [L=535]
Description: putative ribosomal rna-processing protein 8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.2e-58  196.5   0.9    1.1e-55  188.9   0.0    3.2  3  Methyltransf_8   Hypothetical methyltransferase
    8.8e-06   26.3   0.0    4.8e-05   23.9   0.0    2.3  1  Methyltransf_11  Methyltransferase domain
    1.6e-05   24.7   0.2      0.091   12.6   0.0    2.8  3  Methyltransf_31  Methyltransferase domain
    7.6e-05   23.3   0.0     0.0052   17.5   0.0    2.8  1  Methyltransf_25  Methyltransferase domain
    0.00036   20.1   0.8      0.023   14.3   0.0    3.0  3  MTS              Methyltransferase small domain
  ------ inclusion threshold ------
      0.014   15.4   0.0      0.014   15.4   0.0    3.3  3  Methyltransf_32  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltransf_8  Hypothetical methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.9   0.0   3.5e-59   1.1e-55       2     166 ..     196     389 ..     195     414 .. 0.91
   2 ?    4.3   0.0      0.01        31     165     205 ..     442     489 ..     437     506 .. 0.76
   3 ?   -1.4   0.0      0.57   1.7e+03     203     219 .]     519     535 .]     507     535 .] 0.72

  Alignments for each domain:
  == domain 1  score: 188.9 bits;  conditional E-value: 3.5e-59
                     XXXXX-HHHHHHHHHHHHHHHHHS-HHHHHHHHHH-HHHHHHHHHHHHHHHCTSSS-HHHHHHHHHC........................TS-T CS
  Methyltransf_8   2 leakikkrldgarfrflneklytgesskavdlfkedpeafdlyhkgfrsqvkkWPenPldviirklk........................kkkd 72 
                     l+a ++++l ++rfr+lneklyt +ss+ ++lf+e+pe+f+ yh+gfr qv+ WPenP+d  + k+k                        +  +
      KHJ34486.1 196 LQAAMRQKLLSSRFRYLNEKLYTVSSSHSMKLFQENPEMFNEYHEGFRRQVEIWPENPVDSYVAKIKkrgevfkeskkitssekelvsplpRTGG 290
                     7899*************************************************************************************988888 PP

                     TS-EEEES-TT-HHHHH--S.....-..EEEEESS-SSTTEEES-TTS-S--TT-EEEEEEES---SS-HHHHHHHHHHHEEEEEEEEEEEEGGG CS
  Methyltransf_8  73 nlvvadlGcGeakiaeavre.....kekvrsfdlvavnervvacdlakvPledesvdvavfclslmgtnladflkeanrvlkvGGllkvaevksr 162
                        +adlGcG+a ++ + +      + k+ sfdl++  + v+  d+a++Pl d+s+dva+fcl+lmgtn+ df++ea r+l+  G l+vae+ksr
      KHJ34486.1 291 VCRIADLGCGDAVLSASLQSqlnslNLKIFSFDLQSTSKLVTQADIANLPLPDSSIDVAIFCLALMGTNWIDFIEEAFRILRWKGELWVAEIKSR 385
                     899**********99554431111146899***************************************************************** PP

                     -S-H CS
  Methyltransf_8 163 fesv 166
                     f  +
      KHJ34486.1 386 FGRI 389
                     *765 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.01
                     -HHHHHHHHHCTTEEE.....EEEE--STTEEEEEEEE-S..SS-TT- CS
  Methyltransf_8 165 svklfaraltklGfev.....kskdlsnkqfvlfefkkve..kkgkkr 205
                     +v  f++ l k Gfe      +s dl+n +fv + f k +   kgk++
      KHJ34486.1 442 DVSAFVEVLRKRGFELqckenESLDLENRMFVRMYFTKHHspIKGKCA 489
                     788999999999998622222577999*********997644566665 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.57
                     TT---GG--------XX CS
  Methyltransf_8 203 kkrelglklkpclykkr 219
                     +  +    lkpc+yk r
      KHJ34486.1 519 QISSEAKVLKPCVYKLR 535
                     444556789*****976 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   1.6e-08   4.8e-05       2      95 ..     296     378 ..     295     379 .. 0.77

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 1.6e-08
                      EET-TTSHHHHHHHHTT....SEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCCTSS-TT-EEEEEEES-CCC-CCHHHHHHHHHHHEEEE CS
  Methyltransf_11   2 dvGcGtGrlaealakrg....arvvgvDlskemlklakekaseeglkvefvvadaeklpfednsfDlvvssevlhhvedpekalkeiaRvLkpg 91 
                      d+GcG   l++ l+++      +++ +Dl  +             l   + +ad+ +lp++d+s+D+ +   +l+   ++ ++++e+ R+L+  
       KHJ34486.1 296 DLGCGDAVLSASLQSQLnslnLKIFSFDLQSTSK-----------L---VTQADIANLPLPDSSIDVAIFCLALMGT-NWIDFIEEAFRILRWK 374
                      7888888888888855533344444555433332...........1...379************************9.6*************99 PP

                      EEEE CS
  Methyltransf_11  92 Gllv 95 
                      G l 
       KHJ34486.1 375 GELW 378
                      9876 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.4   4.1e+03      90     122 ..     201     235 ..     186     263 .. 0.70
   2 !    9.0   0.0   0.00037       1.1       5      38 ..     292     326 ..     289     328 .. 0.91
   3 !   12.6   0.0     3e-05     0.091      59     129 ..     332     412 ..     330     448 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.4
  Methyltransf_31  90 pdkileeiervlkpggilliedpr..llaelpakv 122
                       +k l + +r+l+++ + ++++++  l +e+p+++
       KHJ34486.1 201 RQKLLSSRFRYLNEKLYTVSSSHSmkLFQENPEMF 235
                      56667777888988888888888854444444443 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00037
  Methyltransf_31   5 lrvlDlGCGtGeltfelaeelgp.kaevvGiDise 38 
                      +r+ DlGCG   l+  l ++l++ + +++++D + 
       KHJ34486.1 292 CRIADLGCGDAVLSASLQSQLNSlNLKIFSFDLQS 326
                      7899******************99999***99875 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 3e-05
  Methyltransf_31  59 eqgdieeleklledekfDlilsnevlnaladpdkileeiervlkpggilliedpr.............llaelpakveeeskay 129
                       q+di +l+  l d+++D+ +  ++    ++  +++ee++r l+ +g+l +++++              ++++++kv+++ +++
       KHJ34486.1 332 TQADIANLP--LPDSSIDVAIF-CLALMGTNWIDFIEEAFRILRWKGELWVAEIKsrfgrivkggnqiKEDNVRKKVKSTKENK 412
                      589******..9*******877.555578999***********************88888888777766666667777766644 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   1.7e-06    0.0052       1      97 []     294     375 ..     294     375 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1.7e-06
                      EEEET-TTSHHHHHHHCTST..SSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlg..kakvtgvDiseemleaareraeeeglnvefvqgdaedlpfedgsfDlvvssgalhhlsdedlekalkeiarv 92 
                      + dlGcG   l++ l+ +l+  + k+  +D++++       ++        + q+d+ +lp++d+s+D+ + + a  ++   ++ ++++e++r+
       KHJ34486.1 294 IADLGCGDAVLSASLQSQLNslNLKIFSFDLQSTS------KL--------VTQADIANLPLPDSSIDVAIFCLA--LMG-TNWIDFIEEAFRI 370
                      67899999999999998884466777777765443......33........5899**************999655..443.56899******** PP

                      EEEEE CS
  Methyltransf_25  93 LkpgG 97 
                      L+ +G
       KHJ34486.1 371 LRWKG 375
                      *9776 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.3      0.61   1.8e+03      61      99 ..      47      85 ..      31      90 .. 0.76
   2 !   14.3   0.0   7.6e-06     0.023       4      67 ..     261     326 ..     259     340 .. 0.79
   3 ?    2.5   0.0     0.032        94     120     137 ..     362     379 ..     356     390 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.61
                EESBHHHHHHHHHHHHHTTGC.EEEEE-STTTTSTTS-EE CS
         MTS 61 vdvdarAlesakenleankle.vevvasdvleeveekkfd 99
                 + +a+A+++a +  +++k++ ++  +++  ++ve kk d
  KHJ34486.1 47 REPKAKAIDLASKADQREKVReGKSKKKNFKKNVE-KKTD 85
                56678999999999998888888888888888888.5554 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 7.6e-06
                 EEEETTSTTT.TS--HHHHHHHHHCHCC.TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHH CS
         MTS   4 lktlpgvFsk.dklDkGsklLletlpke.lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarA 67 
                 +k++  vF + +k+    k L++ lp +    +++DlGcG  vl+a+l+++ ++++++++  d ++
  KHJ34486.1 261 IKKRGEVFKEsKKITSSEKELVSPLPRTgGVCRIADLGCGDAVLSASLQSQLNSLNLKIFSFDLQS 326
                 667777886525677777889999999775557******************999999888777665 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.032
                 HHHHHHHHHEEEEEEEEE CS
         MTS 120 eliaeAkeaLkegGeLli 137
                 ++i+eA ++L+ +GeL++
  KHJ34486.1 362 DFIEEAFRILRWKGELWV 379
                 79***************8 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.7   9.3         6   1.8e+04      64      92 ..      66      94 ..      11     193 .. 0.63
   2 ?   15.4   0.0   4.8e-06     0.014      16      63 ..     281     328 ..     262     340 .. 0.74
   3 ?   -1.9   0.1      0.97   2.9e+03      91     115 ..     398     418 ..     380     433 .. 0.47

  Alignments for each domain:
  == domain 1  score: -6.7 bits;  conditional E-value: 6
  Methyltransf_32 64 vekaekraeklgkkfnkrlsfaelsieea 92
                     v++ +  +++++k+++k++ +a+ +i  +
       KHJ34486.1 66 VREGKSKKKNFKKNVEKKTDKADSDIGAQ 94
                     22222333333333333333333333333 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 4.8e-06
  Methyltransf_32  16 llkelakesgaltvvDvGaGkgYLsfvlalkekeyklkvvgidakeel 63 
                      l+  l ++ g ++++D+G+G + Ls  l+++ + ++lk++++d+++  
       KHJ34486.1 281 LVSPLPRTGGVCRIADLGCGDAVLSASLQSQLNSLNLKIFSFDLQSTS 328
                      33333677999*******************44459********99865 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.97
  Methyltransf_32  91 eatssktltkkveaeeekeeqeeke 115
                      e++     +kkv++++e++++e+++
       KHJ34486.1 398 EDN----VRKKVKSTKENKKEEKRK 418
                      222....223333333333333222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2196  (0.122483); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.69u 0.27s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 3560.09
//
Query:       KHJ34487.1  [L=223]
Description: putative proteasome subunit alpha type-5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-55  185.7   0.1    7.3e-55  185.4   0.1    1.1  1  Proteasome  Proteasome subunit


Domain annotation for each model (and alignments):
>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.4   0.1   4.1e-59   7.3e-55       1     189 [.       9     198 ..       9     199 .. 0.95

  Alignments for each domain:
  == domain 1  score: 185.4 bits;  conditional E-value: 4.1e-59
                 HHHS-EEEEEEETTEEEEEEEEEEEETTEEEESSSSTSEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHSSGTCHHHHHHHHHHHHHHHHHHC CS
  Proteasome   1 vkkGttvvGikgkdgvvlaadkratagskllskstveKifkiddhigvafaGlaaDartlvrraraeaqlyrlrygrpipverlvarvaaklqaytqrs 99 
                 +k G+t++G+++  gv+l+++kr+t  s+ll++s+veKi +id+hig+a++Gl+aDar ++++ar eaq++ +++++p++ve +++++++++++    +
  KHJ34487.1   9 IKLGSTAIGVATGYGVILGVEKRVT--STLLETSSVEKIVEIDRHIGCAMSGLQADARSMIDHARCEAQNHAFSFNEPLRVESCTQAICDLALRFGEGA 105
                 589**********************..*******************************************************************99855 PP

                 ......TTTTTSEEEEEEEEETTTEEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHHHHHHHHHHHHHHHBTTSCSSEEEEE CS
  Proteasome 100 ......grrpfgvslliagvdeeggpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeavelavkalkealerdklsgknievav 189
                         rpfgv+lliag+de+g p+Ly+ +psG++++++ a aiGsgse a++ l++ey++ ltl+ea+ l++k+lk+++e +kl +kn+++a 
  KHJ34487.1 106 dgeksiMSRPFGVALLIAGFDEDG-PQLYHAEPSGTFYRYD-AKAIGSGSEGAQAELQNEYHKSLTLDEAEILVLKTLKQVME-EKLDSKNVQLAS 198
                 44555578*************888.***************6.*****************************************.88******9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1766.92
//
Query:       KHJ34488.1  [L=255]
Description: hypothetical protein EV44_g5338 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1256  (0.0700541); expected 358.6 (0.02)
Passed bias filter:                      507  (0.0282782); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.21s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2002.09
//
Query:       KHJ34489.1  [L=480]
Description: hypothetical protein EV44_g5177 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (480 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       847  (0.0472419); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 3560.08
//
Query:       KHJ34490.1  [L=407]
Description: putative translation elongation factor tu [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.2e-56  190.0   0.0    4.3e-56  189.5   0.0    1.2  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    2.8e-25   88.8   0.0    6.2e-25   87.7   0.0    1.6  1  GTP_EFTU_D3  Elongation factor Tu C-terminal domain
      5e-17   62.0   1.1    1.2e-16   60.9   1.1    1.7  1  GTP_EFTU_D2  Elongation factor Tu domain 2
    2.6e-05   24.3   0.0    4.9e-05   23.4   0.0    1.4  1  MMR_HSR1     50S ribosome-binding GTPase
    0.00055   19.9   0.0     0.0016   18.4   0.0    1.8  2  RsgA_GTPase  RsgA GTPase
  ------ inclusion threshold ------
      0.015   14.9   0.2       0.16   11.6   0.0    2.1  2  cobW         CobW/HypB/UreG, nucleotide-binding domain
      0.017   14.9   0.3          7    6.4   0.1    2.4  2  PduV-EutP    Ethanolamine utilisation - propanediol utilisati


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.5   0.0   1.7e-59   4.3e-56       1     193 [.      15     208 ..      15     209 .. 0.94

  Alignments for each domain:
  == domain 1  score: 189.5 bits;  conditional E-value: 1.7e-59
                 TCEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEE CS
    GTP_EFTU   1 krirnigiighvDhGKtTLtdrLlyktgaiskkgekaeeervlDtlkeErergiTiksaaisleketkkylinliDtPGHvdFskevirglrvlDgavl 99 
                 k+++nig+ighvDhGKtTLt +++++ ++   ++  +     +D+++eEr+rgiTi++a+++++  t+ ++++++D+PGH+d++k++i+g++ +Dgav+
  KHJ34490.1  15 KPHVNIGTIGHVDHGKTTLTAAITKRQSEKGLASFLDY--GSIDKAPEERKRGITISTAHVEYS--TDARHYSHVDCPGHADYIKNMITGAANMDGAVI 109
                 579*********************88888777666664..35**********************..********************************* PP

                 EEETTTBSTHHHHHHHHHHHHTTTE.EEEEEESCGST.HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTB..........THHHHHH CS
    GTP_EFTU 100 vvdaveGvepqteevlrlalkegvp.iivfiNKmDrl.kaelkeiveevkqklsrkeeklekygekgekevpvvfgSalkge..........gvktlle 186
                 vv+a++G +pqt+e+l la+++gv+ i+vf+NK+D l + e+ e+ve+  ++l      l++yg++ge ++p++ gSal +           ++++ll 
  KHJ34490.1 110 VVAASDGQMPQTREHLLLARQVGVQkIVVFVNKIDALeDPEMLELVEMEMREL------LTSYGFEGE-TTPIILGSALCALegrkpeigeqKIDELLA 201
                 *************************9***********999**********9**......********6.***********999999999999999**** PP

                 HHHHHSH CS
    GTP_EFTU 187 alvellp 193
                 a+++++p
  KHJ34490.1 202 AVDNWIP 208
                 ***9998 PP

>> GTP_EFTU_D3  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.7   0.0   2.4e-28   6.2e-25       2     111 ..     307     405 ..     306     406 .. 0.93

  Alignments for each domain:
  == domain 1  score: 87.7 bits;  conditional E-value: 2.4e-28
                  -EEECCEEEEEEESSS.....SS-BSTT-EEEEESSS-EEEEEEEEEEECCSSTTSB-BSS-SSCCSTT-CEEEEEEECCEEEE--TTTHCCCCEEEE CS
  GTP_EFTU_D3   2 ikphtkfeAqvyileke...rhtpitagYrpvlyirtadvtgkvveLlskldkktekvsekkpefvkpGdnvivevelikpialekgseypqlGrFai 96 
                  +k+h+kf +++y+l+ e   rht ++++Yrp++++rtad+++   +L       +e++++ +++ v+pGdnv++++el +p+a+e g       rF+i
   KHJ34490.1 307 AKAHRKFLCSMYVLTTEeggRHTGFQENYRPQIFLRTADEAA---AL-----FWPEGTEQPESKRVMPGDNVEMRCELHNPVAMEVGL------RFNI 390
                  799*************************************99...55.....236666677899************************......**** PP

                  ECTTCEEEEEEEEEE CS
  GTP_EFTU_D3  97 ReggrTvaaGvvtei 111
                  ReggrTva+G vt+i
   KHJ34490.1 391 REGGRTVATGLVTQI 405
                  *************98 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.9   1.1   4.6e-20   1.2e-16       1      73 [.     232     301 ..     232     302 .. 0.97

  Alignments for each domain:
  == domain 1  score: 60.9 bits;  conditional E-value: 4.6e-20
                  EEEEEEEEEESEEETTEEEEEEC.TCTTSEEEEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCEE CS
  GTP_EFTU_D2   1 GtvalgrvysGtlkkGdevrilg.ndtskkeivtrissletfhededeavaganaGvivaikgledaiivGdtl 73 
                  Gtva grv +G lk+++ev+++g  d+   +i+t+++ +etf++ +de +ag+n G+++++++ ed +++G+++
   KHJ34490.1 232 GTVASGRVQRGSLKRDQEVELVGkIDV---PIKTKVTDIETFKKSCDESRAGDNSGLLLRGVKRED-VRRGMVI 301
                  9********************999888...888*********************************.******9 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   1.9e-08   4.9e-05       2     111 ..      20     139 ..      19     152 .. 0.76

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 1.9e-08
                 EEEEESTTSSHHHHHHHHHT................STEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEE CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltg................ekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflaleeadlillvvd 84 
                 ++ +G+   GK+tL  a+t+                +ka  ++k g T+ + + +++++ +++  vD+pG  +       +++ +    ++d +++vv 
  KHJ34490.1  20 IGTIGHVDHGKTTLTAAITKrqsekglasfldygsiDKAPEERKRGITISTAHVEYSTDARHYSHVDCPGHAD------YIKNMITGAANMDGAVIVVA 112
                 889****************7777777888887775559999***************9999**********333......46666666777999999998 PP

                 TTTTCSHHHHHHHHHHHHH.TTSEEEEE CS
    MMR_HSR1  85 aseeklkpldeeleellee.akkplilv 111
                 as++++ + +e+l    ++   +++++ 
  KHJ34490.1 113 ASDGQMPQTREHLLLA-RQvGVQKIVVF 139
                 8855555554444433.33233334444 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.3   3.3e+03     105     123 ..      23      41 ..      17      53 .. 0.79
   2 !   18.4   0.0   6.3e-07    0.0016      13      74 ..     101     161 ..      60     173 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.3
                  ECSTTSSHHHHHHHHCTT- CS
  RsgA_GTPase 105 vGqSGvGKStLinallpel 123
                  +G+   GK+tL  a++ ++
   KHJ34490.1  23 IGHVDHGKTTLTAAITKRQ 41 
                  5666679999999988764 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 6.3e-07
                  EES--EEEEEEESTTTT--HHHHHHHHHHHHHTT-.EEEEEEE-GGG--HHHHHHHHHHHHHH CS
  RsgA_GTPase  13 vaNvdqllivvslkepelslnlldrfLvlaeekgi.epvivlnKiDlleeeeeleelkeelea 74 
                  +aN+d ++ivv++++   ++ +    L+la + g+ ++v+ +nKiD le+ e le ++ e+++
   KHJ34490.1 101 AANMDGAVIVVAASD--GQMPQTREHLLLARQVGVqKIVVFVNKIDALEDPEMLELVEMEMRE 161
                  9*************4..4444555667777777774778889*********977766666665 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.11   2.8e+02       7      30 ..      24      47 ..      19      56 .. 0.82
   2 ?   11.6   0.0   6.1e-05      0.16     104     169 ..      96     162 ..      85     168 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.11
                ESTTCCHHHHHHHHHCT--SS-EE CS
        cobW  7 GflGsGKTtLlnhllenraglkla 30
                G +  GKTtL  +++++++++ la
  KHJ34490.1 24 GHVDHGKTTLTAAITKRQSEKGLA 47
                55667*********9888877766 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 6.1e-05
                 HHHHHCCCECEEEEEEETTTH.CCHCCHHHHHHHHHHTSSEEE.EE-HHHHCHC..HHHHHHHHHHH CS
        cobW 104 eelksdltldavvavvDaknleaeeekieekaedqlaaadllv.lnKtDlldeeallekleerlrql 169
                 + ++ ++++d+ v vv a+  +  +++++ ++ +q+ +  ++v +nK+D l++ ++le +e ++r+l
  KHJ34490.1  96 NMITGAANMDGAVIVVAASDGQMPQTREHLLLARQVGVQKIVVfVNKIDALEDPEMLELVEMEMREL 162
                 56778899***********99999*************99987648********99999999888876 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.1    0.0027         7       6      24 ..      22      40 ..      18      46 .. 0.86
   2 ?    6.0   0.0    0.0035         9      40     116 ..      84     160 ..      68     170 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0027
   PduV-EutP  6 liGkvgsGKttLtqalkge 24
                 iG+v+ GKttLt a++++
  KHJ34490.1 22 TIGHVDHGKTTLTAAITKR 40
                69************99875 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0035
   PduV-EutP  40 viDtPGeylenrklysalivtsaeadvialvqdateeesvfppgf....asvfnkeviGiitkidlaedeenieaveelLk 116
                  +D+PG    +  + + +i+ +a+ d  ++v++a++ +   + +     ++v  ++++  + kid  ed e +e ve +++
  KHJ34490.1  84 HVDCPG----HADYIKNMITGAANMDGAVIVVAASDGQMPQTREHlllaRQVGVQKIVVFVNKIDALEDPEMLELVEMEMR 160
                 589999....456677778888888877777777665554444321111345556778889*************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       471  (0.0262703); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3166.51
//
Query:       KHJ34491.1  [L=581]
Description: putative fad nad -binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.7e-52  177.8   0.1    3.3e-52  177.5   0.1    1.1  1  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
    1.8e-12   47.7   0.0      1e-10   42.0   0.1    2.9  2  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase
    0.00071   18.9   0.7       0.43    9.8   0.1    2.7  3  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
  ------ inclusion threshold ------
      0.019   14.7   1.8      0.019   14.7   0.2    1.7  2  EcoR124_C      Type I restriction and modification enzyme - s
       0.15   12.5   0.5         11    6.5   0.0    2.8  2  NAD_binding_7  Putative NAD(P)-binding


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.5   0.1   9.3e-56   3.3e-52       2     294 .]     118     452 ..     117     452 .. 0.93

  Alignments for each domain:
  == domain 1  score: 177.5 bits;  conditional E-value: 9.3e-56
                  SEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHH...HHHHCHHHHCCCCHCCTCEEEEESCEEEEETEEEC.... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.... RF
  Pyr_redox_2   2 dvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcllskallgvaedaeias...evvkklnqgielllgeevvkidpgkkkvklekkke.... 92 
                  +++++G G++++++ ++l + +++v+++ + ++ +++++ll++  +g+ e+++i++    v++  ++ ++++ + e+++idp++k v +++k++    
   KHJ34491.1 118 NLIILGTGWGAVSLLKKLDTEQYNVIVI-SPRNYFLFTPLLPSCTTGTIEHRSIMEpirSVTRHKKAAVKFYEA-EATNIDPDRKVVRINEKSGgaga 213
                  789*************************.99999999*********************7555555566999999.*********88888777768887 PP

                  TCEEEEEESEEEE---EEE-BCTCTTC.TTBEECCSECHHHHHHCCSS-T..................SEEEEES-SHHHHHHHHHHHHHT-...... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................xxxxxxxxxxxxxxxxxxxxxxxx...... RF
  Pyr_redox_2  93 gdeekiaydklvlAtGssprdlgipGvaenvgklvrtldsaealklkllp..................krivvvGgGyiGvElAaalaklgk...... 166
                  + +++++yd lv+  G+++ ++gipGv e++++l +++ +a+++++k ++                   ++vvvGgG++GvE+A++l ++ +      
   KHJ34491.1 214 SIQTEVQYDMLVISVGAENATFGIPGVREHACFL-KEIGDAQQIRKKIMDcveratfkdqtseevdrlLHMVVVGGGPTGVEFAGELQDFIDqdikkw 310
                  66678999**************************.***************************999988889****************88866688889 PP

                  ........EEEEEESSSSSSTTS-HHHHHHHHHHHHHTTEEEEESCEEEEEEETTEEEEEEETTSCE....EEESEEEE-S-EEES-HHCS..HCCT- CS
                  ........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxx..xxxxx RF
  Pyr_redox_2 167 ........evtlveardrllraldkelsaaleealekeGvevklgtsvkeidgngeklevvledgee....idadlvvvavGvrpstelle..eklgl 250
                          +vtl+ea++++l+++ k+l ++ e  +++e+++++++t v+++++++ ++ev+  dg++    ++  l+v+a+G  +++  ++   ++  
   KHJ34491.1 311 ipeiankfKVTLIEALPNVLPMFSKQLIEYTESTFKEEKIDIRTKTIVNRVNEKSLEAEVTGPDGKKtkevFPFGLLVWATGNAIRPVVKDlmSRIPA 408
                  999999999*******************************************8887777999999988999***************999999999999 PP

                  EEEETTEEE--TTSBES.STTEEE-GGGCTECCSS--HHHHHHHH CS
                  xxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 251 elderggivvdeflrtn.vpgiyaiGDvaggkggpelaqaAvqqG 294
                  + ++r+g+ v+e+l ++  ++i+aiGD+a   g   +aq+A+q+G
   KHJ34491.1 409 QKNSRRGLAVNEYLVVQgTKDIWAIGDCA-VAGYAPTAQVASQEG 452
                  99************9988***********.889999******998 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0     0.072   2.6e+02       2      40 ..     119     159 ..     118     195 .. 0.83
   2 !   42.0   0.1   2.8e-14     1e-10       1      70 [.     282     365 ..     282     374 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.072
                 EEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSS..TTSSH CS
   Pyr_redox   2 vvvvGgGyiglElAgalaelgkkVtvversdkll..rllDe 40 
                 ++++G G+ ++ l + l   + +V v+  ++ +l  +ll+ 
  KHJ34491.1 119 LIILGTGWGAVSLLKKLDTEQYNVIVISPRNYFLftPLLPS 159
                 799****************************9996666655 PP

  == domain 2  score: 42.0 bits;  conditional E-value: 2.8e-14
                 EEEEECSSHHHHHHHHHH............HHTT....SEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEECSEEEEEEEEET CS
   Pyr_redox   1 kvvvvGgGyiglElAgal............aelg....kkVtvversdkllrllDeeaskilqeklekngievllntkveeiegse 70 
                 ++vvvGgG +g+E+Ag+l                     kVt++e+ +++l+++ +++ ++++  +++++i+++++t v+++++++
  KHJ34491.1 282 HMVVVGGGPTGVEFAGELqdfidqdikkwiP--EiankFKVTLIEALPNVLPMFSKQLIEYTESTFKEEKIDIRTKTIVNRVNEKS 365
                 79****************7777755554443..0444349******************************************9765 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       0.6   2.2e+03      88     251 ..     175     208 ..     152     239 .. 0.60
   2 !    6.7   0.1     0.001       3.7       1      19 [.     284     302 ..     284     311 .. 0.89
   3 !    9.8   0.1   0.00012      0.43      80     139 ..     334     398 ..     311     426 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.6
  Pyr_redox_3  88 revaksfelpiklfeeVesvkkedegfevetsketyeAkkviiAtGefdkPnklnipGeeklvkhyskvkefhkyagqkvvViGgknSavDaAlelvr 185
                  r+v+++++  +k +                                                                                    
   KHJ34491.1 175 RSVTRHKKAAVKFY------------------------------------------------------------------------------------ 188
                  33333333333332.................................................................................... PP

  Pyr_redox_3 186 kgaeVtvvtrgseiekeesdpsyslkpdienrleelvkeekikvlfnaevkeikekeeeykvkted 251
                                                                +ae+++i+ + + +++++++
   KHJ34491.1 189 ----------------------------------------------EAEATNIDPDRKVVRINEKS 208
                  ..............................................22444444444444444433 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.001
  Pyr_redox_3   1 iIiGaGPaGlaaaielkka 19 
                  +++G+GP G+++a el+++
   KHJ34491.1 284 VVVGGGPTGVEFAGELQDF 302
                  79**************986 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00012
  Pyr_redox_3  80 rkealeYlrevaksfelpiklfeeVesvkkedegfeve.....tsketyeAkkviiAtGefdkPn 139
                   k++ eY+++  k+++++i++++ V++v++++ + ev+      +ke++    +++AtG   +P 
   KHJ34491.1 334 SKQLIEYTESTFKEEKIDIRTKTIVNRVNEKSLEAEVTgpdgkKTKEVFPFGLLVWATGNAIRPV 398
                  57899999999999999999999999999999999997222224667778888999999866665 PP

>> EcoR124_C  Type I restriction and modification enzyme - subunit R C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.2   5.2e-06     0.019     131     225 ..     251     358 ..     244     382 .. 0.79
   2 ?   -1.8   0.1      0.56     2e+03     150     180 ..     461     494 ..     454     510 .. 0.57

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 5.2e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.............XXXXXXXXXXXXX CS
   EcoR124_C 131 eddkeereeiekalrssaelrskkdlieefindlkkkle..ddkedieeefeefknkekekeleelieeegld.............eealkkfikeilk 214
                  d +++r++i + +++++   +  +++++ ++ +    +  +++ ++  e+++f+++  +k + e++++++++             ++ ++++++++++
  KHJ34491.1 251 GDAQQIRKKIMDCVERATFKDQTSEEVDRLLHMVVV--GggPTGVEFAGELQDFIDQDIKKWIPEIANKFKVTliealpnvlpmfsKQLIEYTESTFKE 347
                 678999****************************77..667999******************************9999888888855555555555555 PP

                 XXX...XXXXX CS
   EcoR124_C 215 rgkfdalgtei 225
                 +++   ++t +
  KHJ34491.1 348 EKIDIRTKTIV 358
                 55543333333 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.56
                 XXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXX CS
   EcoR124_C 150 lrskkdlieefindlkkkle...ddkedieeefe 180
                  ++k + ie+ i +l ++l+    ++++i ee++
  KHJ34491.1 461 TMAKSEAIENKISELSQSLNlkpGNSAEISEEIK 494
                 5566666666666666633333545555555554 PP

>> NAD_binding_7  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0     0.003        11       6      40 ..     115     149 ..     111     230 .. 0.83
   2 ?    3.0   0.3     0.039   1.4e+02       9      77 ..     282     369 ..     279     379 .. 0.59

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.003
  NAD_binding_7   6 kgkkvlvvGgGevAarkvrklleagakvtvvapev 40 
                    ++k+ ++ G G  A + ++kl  ++ +v+v++p+ 
     KHJ34491.1 115 SKKNLIILGTGWGAVSLLKKLDTEQYNVIVISPRN 149
                    78999****************************94 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.039
  NAD_binding_7   9 kvlvvGgGevAarkvrkllea.gakvtvvapevkeele................elvklaeeel.ekdle.gadlviaatddrelner 77 
                    +++vvGgG+ + + +  l ++ + +++   pe++++ +                +l++++e+++ e++++ ++++++  +++++l+++
     KHJ34491.1 282 HMVVVGGGPTGVEFAGELQDFiDQDIKKWIPEIANKFKvtliealpnvlpmfskQLIEYTESTFkEEKIDiRTKTIVNRVNEKSLEAE 369
                    7899999999987766666641344544444432222233333444555555558888888888435555356666666666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (581 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.46
# Mc/sec: 3822.49
//
Query:       KHJ34492.1  [L=812]
Description: hypothetical protein EV44_g6503 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-53  181.2   2.4    5.8e-53  179.3   2.4    2.0  1  DUF4449   Protein of unknown function (DUF4449)


Domain annotation for each model (and alignments):
>> DUF4449  Protein of unknown function (DUF4449)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.3   2.4   3.3e-57   5.8e-53       1     163 []     639     797 ..     639     797 .. 0.98

  Alignments for each domain:
  == domain 1  score: 179.3 bits;  conditional E-value: 3.3e-57
     DUF4449   1 vdvdnLkiklkkSkHklLfklfKPlllkvirpaiqkalekqirdaleklDaelyevkqeaerakeeaksdpenapniysryldalkkkftkkkekaeek 99 
                 vd++n+kik+kkS+HklL+ + KP+llkvirpa+qkale +i ++  +lD+ l+++k +++ra +eak+ pe+ +niy++yl+a++k+f +kkekae+ 
  KHJ34492.1 639 VDIKNFKIKIKKSQHKLLLVISKPILLKVIRPALQKALEFKILENARRLDSLLFKIKLDVDRALQEAKNHPEKSKNIYQNYLSAFQKHFFQKKEKAEA- 736
                 89************************************************************************************************. PP

     DUF4449 100 ekakkadkkvniavtkedsifpdiklpggistkateykelaakGekWeSpvFsigsasestdlp 163
                    +++   vn+a+tk+dsifp+i+l +gis+ at+ykela +Ge+W+S++F++g+a  s+++p
  KHJ34492.1 737 ---ATSGILVNVAITKHDSIFPNIHLAEGISSIATKYKELALQGEEWQSAIFNLGTAPPSKNIP 797
                 ...47899*****************************************************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (812 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1128  (0.0629148); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 5488.97
//
Query:       KHJ34493.1  [L=647]
Description: putative transcription factor iiic-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-41  141.3   0.3    1.5e-40  138.6   0.1    2.5  2  DUF4211     Domain of unknown function (DUF4211)
  ------ inclusion threshold ------
       0.23   11.6   3.0       0.88    9.7   3.0    2.1  1  CaM_bdg_C0  Calmodulin-binding domain C0 of NMDA receptor NR1


Domain annotation for each model (and alignments):
>> DUF4211  Domain of unknown function (DUF4211)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.6   0.1   1.6e-44   1.5e-40       1     144 []     390     532 ..     390     532 .. 0.97
   2 ?   -1.2   0.0      0.21   1.9e+03      32      54 ..     546     568 ..     537     578 .. 0.80

  Alignments for each domain:
  == domain 1  score: 138.6 bits;  conditional E-value: 1.6e-44
     DUF4211   1 dFivededeelgapdeeeeedelplefsskahkdlkehFkdvvewlvsnaldpdfllafeerkdelylvalkklddevegladslvsssaWkpefkkaL 99 
                 dF+v+ +de  g+pd++     +pl+f+++ahk+lk+hF+dvvew+v+ ++ p+    f  r+de+yl+a++kldd ++gla+s+++s++W+ ef++aL
  KHJ34493.1 390 DFVVNNDDELFGVPDHM---AFVPLQFTHTAHKPLKDHFRDVVEWMVKDKVYPA----F-AREDEVYLQAFRKLDDICQGLAKSKFISTQWTLEFTQAL 480
                 8**9999999*****86...589*******************************....7.9************************************** PP

     DUF4211 100 earPelditelease.......ekkCdAcnrskhpatysvrlsGkpYnkktl 144
                 +++P++ +  l+++e        +kCdAcnr+kh +t  +++ G++Y+kktl
  KHJ34493.1 481 WKYPYFISGPLSEEEnyklntgVPKCDACNRRKHIPTSYIQFDGQAYDKKTL 532
                 ************9999*****99****************************8 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.21
     DUF4211  32 hkdlkehFkdvvewlvsnaldpd 54 
                 ++  k+ + + v+wlv  +++++
  KHJ34493.1 546 RSRNKKAYSKQVQWLVGSICKRN 568
                 567788999999***99998877 PP

>> CaM_bdg_C0  Calmodulin-binding domain C0 of NMDA receptor NR1 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   3.0   9.8e-05      0.88       4      18 ..     319     333 ..     317     335 .. 0.95

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 9.8e-05
  CaM_bdg_C0   4 KKHqirkqKqlELAr 18 
                 K+H++ k+K lEL++
  KHJ34493.1 319 KRHRTDKEKALELMK 333
                 9*************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (647 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1077  (0.0600703); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.24s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 4691.28
//
Query:       KHJ34494.1  [L=258]
Description: putative spherulin-1b precursor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-25   88.2   0.5    2.6e-14   53.6   0.0    2.3  2  Ank_2     Ankyrin repeats (3 copies)
    5.9e-20   70.8   6.4    1.1e-05   25.7   0.2    4.4  4  Ank       Ankyrin repeat
    3.8e-18   63.7   2.2    0.00042   20.5   0.1    4.5  4  Ank_3     Ankyrin repeat
    1.7e-16   60.3   5.8    3.1e-06   27.6   0.2    4.5  5  Ank_4     Ankyrin repeats (many copies)
    2.7e-16   59.4   3.2     0.0021   18.3   0.1    4.4  4  Ank_5     Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.0   7.2e-18   2.6e-14       1      75 [.      69     160 ..      69     166 .. 0.81
   2 !   40.1   0.1   1.1e-13   4.1e-10      25      82 ..     137     211 ..     134     212 .. 0.86

  Alignments for each domain:
  == domain 1  score: 53.6 bits;  conditional E-value: 7.2e-18
       Ank_2   1 LhlAakngnlelvklLl....egadpn....k...ngktaLhyAakngnleivklLleh.......adndgrtpLhyAarsghleivklLlek 75 
                 Lh+A++ g l+++klLl    e   p+    +     +t+Lh+Aa++g++ei+ lL+e         d++g ++L++Aa  gh  +v+lLl +
  KHJ34494.1  69 LHVASSIGCLSICKLLLtlghE-GPPDapqiSlneSYETPLHLAAREGHTEIIHLLCERcptsilrRDSSGLNALMVAAMGGHDTVVQLLLTY 160
                 899*****99*******96532.233343341545679*******************9667778766699*********99*********943 PP

  == domain 2  score: 40.1 bits;  conditional E-value: 1.1e-13
       Ank_2  25 ngktaLhyAakngnleivklLleh.................adndgrtpLhyAarsghleivklLlekgadinlk 82 
                  g++aL++Aa++g+  +v+lLl +                 +d+dg+t+LhyA  +ghl +++ Ll  gad +++
  KHJ34494.1 137 SGLNALMVAAMGGHDTVVQLLLTYapgsiggqenkriildaVDKDGNTALHYATMYGHLLVLRTLLAAGADWEKR 211
                 589***********999*****956666777777888877677***********************99**98766 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.1   6.3e-05      0.23       6      23 ..      69      89 ..      66      98 .. 0.79
   2 !   22.1   0.1   3.9e-08   0.00014       4      24 ..     106     126 ..     105     135 .. 0.83
   3 !   11.6   0.0   8.3e-05       0.3       2      22 ..     138     158 ..     137     174 .. 0.88
   4 !   25.7   0.2     3e-09   1.1e-05       1      30 [.     181     211 ..     181     213 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 6.3e-05
                HHHHHHHTTHHHHHHHH...T CS
         Ank  6 LHlAatngkkriiklLL...h 23
                LH+A+++g ++i+klLL   h
  KHJ34494.1 69 LHVASSIGCLSICKLLLtlgH 89
                9***************96454 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 3.9e-08
                 BHHHHHHHHTTHHHHHHHHTT CS
         Ank   4 TPLHlAatngkkriiklLLhG 24 
                 TPLHlAa++g+++ii+lL  +
  KHJ34494.1 106 TPLHLAAREGHTEIIHLLCER 126
                 ****************87644 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 8.3e-05
                 SBBHHHHHHHHTTHHHHHHHH CS
         Ank   2 GnTPLHlAatngkkriiklLL 22 
                 G  +L++Aa++g+  +++lLL
  KHJ34494.1 138 GLNALMVAAMGGHDTVVQLLL 158
                 6789****************9 PP

  == domain 4  score: 25.7 bits;  conditional E-value: 3e-09
                 TSBBHHHHHHHHTTHHHHHHHH.TTTSTTCB CS
         Ank   1 dGnTPLHlAatngkkriiklLL.hGAnlnal 30 
                 dGnT+LH+A ++g++ +++ LL  GA+   +
  KHJ34494.1 181 DGNTALHYATMYGHLLVLRTLLaAGADWEKR 211
                 9*********************88**96655 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00069       2.5       3      23 ..      66      86 ..      65      94 .. 0.88
   2 !   20.5   0.1   1.2e-07   0.00042       2      25 ..     104     127 ..     103     132 .. 0.88
   3 !   11.4   0.0   0.00011      0.39       2      23 ..     138     159 ..     137     164 .. 0.90
   4 !   19.2   0.0   3.2e-07    0.0011       1      28 [.     181     207 ..     181     210 .. 0.94

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00069
       Ank_3  3 etpLhlAarsgnleivkfLle 23
                ++ Lh+A + g+l+i+k+Ll 
  KHJ34494.1 66 NSSLHVASSIGCLSICKLLLT 86
                789****************98 PP

  == domain 2  score: 20.5 bits;  conditional E-value: 1.2e-07
       Ank_3   2 GetpLhlAarsgnleivkfLlenk 25 
                 +etpLhlAar g++ei+++L+e +
  KHJ34494.1 104 YETPLHLAAREGHTEIIHLLCERC 127
                 69******************9954 PP

  == domain 3  score: 11.4 bits;  conditional E-value: 0.00011
       Ank_3   2 GetpLhlAarsgnleivkfLle 23 
                 G ++L++Aa+ g+ ++v++Ll 
  KHJ34494.1 138 GLNALMVAAMGGHDTVVQLLLT 159
                 889*****************97 PP

  == domain 4  score: 19.2 bits;  conditional E-value: 3.2e-07
       Ank_3   1 nGetpLhlAarsgnleivkfLlenkgad 28 
                 +G+t+Lh+A ++g+l +++ Ll   gad
  KHJ34494.1 181 DGNTALHYATMYGHLLVLRTLLA-AGAD 207
                 69*********************.8999 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.42   1.5e+03       5      23 ..      24      42 ..      21      51 .. 0.84
   2 !   25.4   0.0   4.2e-09   1.5e-05       3      54 ..      67     123 ..      65     124 .. 0.87
   3 !    9.4   0.0   0.00046       1.7      27      55 .]     131     158 ..     126     158 .. 0.91
   4 !   27.6   0.2   8.7e-10   3.1e-06       2      55 .]     139     202 ..     138     202 .. 0.91
   5 !   18.8   0.1   4.9e-07    0.0018       2      34 ..     183     214 ..     182     224 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.42
       Ank_4  5 LhyaaisgrlelvrlLlek 23
                L +a++++++ lv+++l +
  KHJ34494.1 24 LRRAIYAQDTSLVARILKS 42
                7799999999999999854 PP

  == domain 2  score: 25.4 bits;  conditional E-value: 4.2e-09
       Ank_4   3 taLhyaaisgrlelvrlLlekgad.....inaqdnrsGetalhiAakrgnveilklL 54 
                 + Lh a + g+l +++lLl  g +     +  ++n+s et+lh Aa+ g+ ei++lL
  KHJ34494.1  67 SSLHVASSIGCLSICKLLLTLGHEgppdaPQISLNESYETPLHLAAREGHTEIIHLL 123
                 67*****************667777745655569********************998 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00046
       Ank_4  27 inaqdnrsGetalhiAakrgnveilklLl 55 
                 i ++ ++sG++al  Aa++g+  +++lLl
  KHJ34494.1 131 ILRR-DSSGLNALMVAAMGGHDTVVQLLL 158
                 7899.9***************99999997 PP

  == domain 4  score: 27.6 bits;  conditional E-value: 8.7e-10
       Ank_4   2 ltaLhyaaisgrlelvrlLl...........ekgadinaqdnrsGetalhiAakrgnveilklLl 55 
                 l aL  aa+ g+  +v+lLl           +k++ ++a+ +++G+talh+A + g++ +l+ Ll
  KHJ34494.1 139 LNALMVAAMGGHDTVVQLLLtyapgsiggqeNKRIILDAV-DKDGNTALHYATMYGHLLVLRTLL 202
                 678999**********************99667999****.****************98887776 PP

  == domain 5  score: 18.8 bits;  conditional E-value: 4.9e-07
       Ank_4   2 ltaLhyaaisgrlelvrlLlekgadinaqdnrs 34 
                 +taLhya ++g+l ++r Ll+ gad+ ++ n  
  KHJ34494.1 183 NTALHYATMYGHLLVLRTLLAAGADWEKR-NCW 214
                 89***********************9998.544 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00043       1.6      15      37 ..      64      88 ..      51      99 .. 0.83
   2 !   12.7   0.0   3.4e-05      0.12      17      36 ..     104     124 ..      89     129 .. 0.78
   3 !   18.1   0.0     7e-07    0.0025       6      38 ..     128     162 ..     122     173 .. 0.84
   4 !   18.3   0.1   5.9e-07    0.0021       8      43 ..     174     209 ..     168     221 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00043
       Ank_5 15 ggntpLhvAakygaadvvrlLl..a 37
                 +n+ LhvA++ g++++++lLl   
  KHJ34494.1 64 LSNSSLHVASSIGCLSICKLLLtlG 88
                57899*****************653 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 3.4e-05
       Ank_5  17 n.tpLhvAakygaadvvrlLl 36 
                 + tpLh+Aa+ g+ +++ lL+
  KHJ34494.1 104 YeTPLHLAAREGHTEIIHLLC 124
                 33**************98887 PP

  == domain 3  score: 18.1 bits;  conditional E-value: 7e-07
       Ank_5   6 padvnrldgggntpLhvAakygaadvvrlLl..ar 38 
                 p ++ r+d  g ++L+vAa +g+ +vv+lLl  a+
  KHJ34494.1 128 PTSILRRDSSGLNALMVAAMGGHDTVVQLLLtyAP 162
                 6678899************************6444 PP

  == domain 4  score: 18.3 bits;  conditional E-value: 5.9e-07
       Ank_5   8 dvnrldgggntpLhvAakygaadvvrlLlargadln 43 
                  +++ d++gnt+Lh+A  yg++ v+r Lla gad+ 
  KHJ34494.1 174 ILDAVDKDGNTALHYATMYGHLLVLRTLLAAGADWE 209
                 578899****************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 2055.72
//
Query:       KHJ34495.1  [L=500]
Description: hypothetical protein EV44_g3457 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.9e-27   94.0   0.4    2.1e-25   89.6   0.4    2.2  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.6   0.4   1.2e-29   2.1e-25       7     221 ..      83     298 ..      73     299 .. 0.86

  Alignments for each domain:
  == domain 1  score: 89.6 bits;  conditional E-value: 1.2e-29
                 S-EEE......-THHHHCTB--...........-------HHHH.............HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET..... CS
       RVT_1   7 gsyRpisllsvdykalnkliakrLkdvl..ekllsenqpgfrpgrstldavedllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvptklin 103
                 + y pi+ll++++k+l+kl+a+r+++++    ll e+                             + +lD+ +aFd+v++++l + l + ++p+++i 
  KHJ34495.1  83 NAYKPIALLNTIGKLLEKLVANRISKAAekYGLLLEEK------------------------MGVRAKSLDIFGAFDNVSHQRLVHNLREKGTPSWMIT 157
                 6899******************9999842223333333........................3445559****************************** PP

                 .....................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHH......HHHHHHHHHHHHHHTT CS
       RVT_1 104 liksflstrsfsvrv.ngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskee......lqelleaveewlkesg 195
                  i+sfl++rs+++ + +  +  ++ +++g+pqGs lSP+lf +f +  l   +++      + ++DD+ il+ s +       lq+l e+ e+  k +g
  KHJ34495.1 158 FIESFLKERSTVIVLgSF-KGDQIQTSTGIPQGSSLSPILFLFFASTQLSTPQTA--TSSAVGFVDDTNILTWSDTTeenclrLQQLHEKYESLDKTHG 253
                 **********99988555.559************************999999996..7*************99966668******************** PP

                 --BEGGG-EEE........................ESSEEETTEE CS
       RVT_1 196 lkinpeKtklvlft..................v.kseevkyLGvt 221
                 +k++p+K +l++f                      + ++++LG++
  KHJ34495.1 254 VKFAPNKYQLMHFSrarnkhnlqapiiiqshlTnPQISLRILGIH 298
                 *************99988888888888877652577777888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       514  (0.0286686); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.36
# Mc/sec: 4158.46
//
Query:       KHJ34496.1  [L=914]
Description: hypothetical protein EV44_g0770 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-27   95.9   2.6    1.5e-27   95.9   2.6    2.8  3  LsmAD     LsmAD domain


Domain annotation for each model (and alignments):
>> LsmAD  LsmAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.9   2.6   8.6e-32   1.5e-27       1      71 []     100     173 ..     100     173 .. 0.97
   2 ?   -3.2   0.0      0.74   1.3e+04      21      42 ..     206     227 ..     204     232 .. 0.77
   3 ?    0.0   0.5     0.072   1.3e+03      24      49 ..     347     372 ..     341     382 .. 0.53

  Alignments for each domain:
  == domain 1  score: 95.9 bits;  conditional E-value: 8.6e-32
       LsmAD   1 FgvkstYdEnlYTtkldksspeykereaeAeriArEIessastnahvaeerglkv...ddsgldEEdkYSaVrR 71 
                 Fg++++Y+En+YTt +d+++p+yk+r+aeA+r+A+EIe+s+++n+hvaeer l+     +s++dEEdkYS+V+R
  KHJ34496.1 100 FGLTTDYNENIYTTAIDRNHPQYKQRVAEADRKAKEIERSTTNNPHVAEERILNNingLNSKMDEEDKYSKVHR 173
                 9***************************************************9888887888**********98 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 0.74
       LsmAD  21 peykereaeAeriArEIessas 42 
                 p+   + ++ e+ A  Ie++++
  KHJ34496.1 206 PSITAQTNRTEKAAGHIETTTK 227
                 6677788899999999998865 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.072
       LsmAD  24 kereaeAeriArEIessastnahvae 49 
                 k++ +  ++  r +e+ ++++ h +e
  KHJ34496.1 347 KKQKEIQAKAQRNVEEAEASKLHSQE 372
                 33333333444444444444555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (914 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       983  (0.0548274); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.40
# Mc/sec: 6803.42
//
Query:       KHJ34497.1  [L=301]
Description: putative epoxide hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0034   17.5   0.0     0.0085   16.2   0.0    1.8  1  HAD_2           Haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
      0.015   15.3   0.0      0.026   14.6   0.0    1.3  1  Hydrolase_like  HAD-hyrolase-like


Domain annotation for each model (and alignments):
>> HAD_2  Haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   9.5e-07    0.0085     117     149 ..     180     232 ..     145     261 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 9.5e-07
       HAD_2 117 giesyFdvivtsedvekkKPdpeviekalekl....................k 149
                  + s+Fd  ++s +++ +KPdp+++e ale                      +
  KHJ34497.1 180 SLRSIFDIYICSAEIGIRKPDPKIYEYALEAAnnfakknidspkaislgwekG 232
                 4679**************************98555555555555555555555 PP

>> Hydrolase_like  HAD-hyrolase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   2.9e-06     0.026       2      57 ..     196     270 ..     195     283 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.9e-06
                     .STTSSHHHHHHHHHH....................---GGGEEEEES-TTTHHHHHHHCT-EEEEESSSSS-TTT CS
  Hydrolase_like   2 lgKPepemydfalevl....................gsdpeevlmiGDrlatDiagAnnaGwksvLVltGvtrped 57 
                     ++KP p +y++ale+                     g+ p++vl+  D     ++g++ aG + + V  G+t ++ 
      KHJ34497.1 196 IRKPDPKIYEYALEAAnnfakknidspkaislgwekGLFPRDVLFLDDI-GENVKGGKLAGFSVIKVELGKTWEAV 270
                     59**************99998888777777776666666******9999.*********************99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       307  (0.0171231); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2317.42
//
Query:       KHJ34498.1  [L=173]
Description: putative rna recognition domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-21   74.0   0.0    8.7e-21   73.5   0.0    1.2  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
     0.0022   18.0   0.0     0.0033   17.5   0.0    1.3  1  RRM_7     RNA recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.5   0.0   9.7e-25   8.7e-21       1      70 []       4      74 ..       4      74 .. 0.99

  Alignments for each domain:
  == domain 1  score: 73.5 bits;  conditional E-value: 9.7e-25
                EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1  1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70
                lf+g+L++ ++e++L++ F++fG+++++ +v+d etg+s+gf+f+++ s+ +A++A++a+++  ++gr+++
  KHJ34498.1  4 LFIGGLSWGTDEHTLRRKFEEFGQVEEAVVVKDrETGRSRGFGFIRYSSEGEADNAMSAMDNVDFDGRTIR 74
                8********************************************************************96 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   3.7e-07    0.0033       3      29 ..       3      29 ..       1      65 [. 0.82

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 3.7e-07
       RRM_7  3 kvFvGGlPiDiteeelkatfkefgkvl 29
                k+F+GGl +  +e+ l + f+efg+v 
  KHJ34498.1  3 KLFIGGLSWGTDEHTLRRKFEEFGQVE 29
                99**********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       326  (0.0181828); expected 358.6 (0.02)
Passed bias filter:                      174  (0.00970495); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1273.49
//
Query:       KHJ34499.1  [L=1897]
Description: hypothetical protein EV44_g4395 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1897 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3046  (0.169892); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                       312  (0.017402); expected 17.9 (0.001)
Passed Fwd filter:                        69  (0.00384851); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 3.22u 0.44s 00:00:03.66 Elapsed: 00:00:00.78
# Mc/sec: 7381.06
//
Query:       KHJ34500.1  [L=224]
Description: putative phosducin family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.8e-14   51.7   0.3      7e-14   51.4   0.3    1.1  1  Phosducin  Phosducin


Domain annotation for each model (and alignments):
>> Phosducin  Phosducin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.4   0.3   3.9e-18     7e-14      95     246 ..      71     217 ..      43     224 .] 0.85

  Alignments for each domain:
  == domain 1  score: 51.4 bits;  conditional E-value: 3.9e-18
                 T----HHHHHHHHHHHHHHHHHHH-------SEEE--SHHHHHHHHHSS-TT-EEEEEEE-TTSTTHHHHHHHHHHHHHH-TTSEEEEEEHHHH--TTS CS
   Phosducin  95 kdkddeeflrkyrkqrmdemrqklskgprfkfvlelesgeqfldtidkeqkitlivvhiyedgvkgtealnssliclaaeyptvkfckvkasvigasdr 193
                  d++deefl  yr+qrm e+ qkl k   ++ v+ +   +   ++ d     t ++v +    v+    l      +a +yp +kfc ++a    a + 
  KHJ34500.1  71 EDLEDEEFLATYRQQRMREI-QKLYKKSIHGTVYPITKPDYSREVTDASTSFT-VLVLLTSTNVES-RKLSELWKQIACKYPEMKFCEMRAEM--AIEG 164
                 489****************8.8999************9998888888776655.566677777775.5688888999*************986..6677 PP

                 S-TTT-SEEEEEETTEEEEEETTGGGGS-TT--HHHHHHHHHTTT-S---XXX CS
   Phosducin 194 fsrdvlpallvykagellsnfvrvtdqlaedffavdleaflqefgllpekevl 246
                 + +   p++l+yk  e+l + v++    + +    d+e +l + g++ e  + 
  KHJ34500.1 165 YPERNCPTILIYKEREILRQVVSLKTLGGLNVQVMDIENLLLDVGVIVEDSLR 217
                 889999******************999999****************9997765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       575  (0.0320709); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.20s 00:00:00.61 Elapsed: 00:00:00.35
# Mc/sec: 1913.50
//
Query:       KHJ34501.1  [L=424]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-08   34.7  12.3    2.7e-08   33.8  12.3    1.5  1  CFEM      CFEM domain


Domain annotation for each model (and alignments):
>> CFEM  CFEM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8  12.3   1.5e-12   2.7e-08       4      66 .]      29      92 ..      26      92 .. 0.92

  Alignments for each domain:
  == domain 1  score: 33.8 bits;  conditional E-value: 1.5e-12
                TS-GGGTCGGG---TTSS.S-TT-HH.HHHH-HHHHHHHHHHHHHH--THHHHHHHHHHHHHHH CS
        CFEM  4 alPkCaqdClaeavkkssgCakddta.CiCtnaklqseitdCvtaaCtaeealaavnaasslCa 66
                  P+C ++C++e v ++++C+ +++a C+Ctn +lq+ +++Cv+ +C+ ee+  a+n  ++lCa
  KHJ34501.1 29 PTPSCVTSCFVENVFREAKCDINQVAqCLCTNIALQHRLSTCVQTSCNFEEQGIAINEQAKLCA 92
                57**********9976668**999988******************************9999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       968  (0.0539907); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.20s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 3298.99
//
Query:       KHJ34502.1  [L=130]
Description: putative te1b-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.6e-09   35.2   0.0    9.6e-09   35.1   0.0    1.0  1  RVT_1           Reverse transcriptase (RNA-dependent DNA poly
  ------ inclusion threshold ------
       0.02   14.8   0.0      0.024   14.5   0.0    1.2  1  Phage_TTP_11    Phage tail tube, TTP, lambda-like
      0.087   11.7   0.0      0.087   11.7   0.0    1.1  1  Arylsulfotrans  Arylsulfotransferase (ASST)


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   0.0   1.6e-12   9.6e-09      94     206 ..       3     117 ..       1     129 [. 0.90

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 1.6e-12
                 -EEET.........................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHH......HHHHHHH CS
       RVT_1  94 afkvptklinliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskee......lqellea 186
                 + + p +++++ +sfl++r+++vr+ g  ++++  ++g+p  s++S llf l+m e +++ + r     +  YaDDi  l+ +++       +q+ +++
  KHJ34502.1   3 RQGWPNSILRWTSSFLRDRRVHVRYLGGITSPKDLTCGIPKDSPISSLLFLLYMAEPMKSGKVR----AHFGYADDIGALAIGRTIseslsvAQREVDS 97 
                 6678999******************88867*********************************8....8********998888777779999******* PP

                 HHHHHHHTT--BEGGG-EEE CS
       RVT_1 187 veewlkesglkinpeKtklv 206
                 +++w  ++ +++  +K+ ++
  KHJ34502.1  98 LSDWTHSNAVSFDIKKSDVI 117
                 *******9999999999887 PP

>> Phage_TTP_11  Phage tail tube, TTP, lambda-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   3.9e-06     0.024      31      85 ..      26      80 ..      15     120 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 3.9e-06
  Phage_TTP_11 31 kykkglkspgaatlginidprlashlrlfqlsekdaetsvkwaigfsdavdvkpt 85
                  +y  g+ sp + t gi  d  ++s l l  ++e      v+   g++d +++   
    KHJ34502.1 26 RYLGGITSPKDLTCGIPKDSPISSLLFLLYMAEPMKSGKVRAHFGYADDIGALAI 80
                  7999*********************************************997654 PP

>> Arylsulfotrans  Arylsulfotransferase (ASST)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   1.5e-05     0.087     165     196 ..      93     125 ..      56     130 .] 0.78

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.5e-05
  Arylsulfotrans 165 agvgagrdWlHiNsveydekddsii..vSsRhqs 196
                     + v++  dW+H N+v++d k+ ++i  +S R q+
      KHJ34502.1  93 REVDSLSDWTHSNAVSFDIKKSDVIqfLSHR-QD 125
                     4567789***********8888777445666.54 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (130 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 954.58
//
Query:       KHJ34503.1  [L=196]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.025   14.0   0.1      0.028   13.8   0.1    1.3  1  SelP_N      Selenoprotein P, N terminal region


Domain annotation for each model (and alignments):
>> SelP_N  Selenoprotein P, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   1.6e-06     0.028     100     170 ..      30     102 ..       4     175 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.6e-06
      SelP_N 100 DvWqil..ngnkDDFliYDRCGrL.vyhlgLPysfltfpyveeaikatyceekCGnCslesseaeeeckevtka 170
                   W  l  ++ +  F ++D  G + +++ +LP  f +     + i++      CGnC  ++ +a+++ck  tk 
  KHJ34503.1  30 RAWLALfsEAPRCGFRVFDESGIMkIFKKKLPIEFCKRCNGHHNIRNCSRAPSCGNCGSTM-HAQDVCKVLTKC 102
                 4565552234466799******87579******************************9876.568899988873 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       941  (0.0524848); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1494.51
//
Query:       KHJ34504.1  [L=574]
Description: putative vacuolar protein sorting-associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-11   42.2   0.5    5.7e-11   41.4   0.5    1.3  1  Vps62     Vacuolar protein sorting-associated protein 62


Domain annotation for each model (and alignments):
>> Vps62  Vacuolar protein sorting-associated protein 62
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.5   3.2e-15   5.7e-11     365     432 ..     350     418 ..     333     445 .. 0.87

  Alignments for each domain:
  == domain 1  score: 41.4 bits;  conditional E-value: 3.2e-15
       Vps62 365 kiGehvgdWehvtlrisnfsgeLlsvyfsqhsgGewvdasdlefiegg...nkavvyssknghasypkpgl 432
                 + G+hvgdWeh  +r  n  g  ++v+fs hsgG   d   +e  +g+    ++v ys+  +ha+y+++g 
  KHJ34504.1 350 RFGNHVGDWEHSLIRFKN--GVPQAVFFSAHSGGLAYDWNAVEKGKGKgreGRPVLYSAVGSHAMYATAGK 418
                 67*************987..8889*******************99886333689**************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       820  (0.045736); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 4363.21
//
Query:       KHJ34505.1  [L=223]
Description: putative coiled-coil domain-containing protein like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-25   88.2  28.8    1.6e-24   86.9  24.2    2.4  2  Ccdc124   Coiled-coil domain-containing protein 124 /Oxs1


Domain annotation for each model (and alignments):
>> Ccdc124  Coiled-coil domain-containing protein 124 /Oxs1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.9  24.2   8.9e-29   1.6e-24       2     129 .]      54     193 ..       2     193 .. 0.80
   2 ?   -3.0   0.1      0.57     1e+04      96     102 ..     205     211 ..     196     220 .. 0.47

  Alignments for each domain:
  == domain 1  score: 86.9 bits;  conditional E-value: 8.9e-29
     Ccdc124   2 raqiekreeeekkkeeke......kkekkkakkkeveekelee..nvnrlsraeenaeeeekveAsgideaiaaLsvk..keekldrhpekrlkAaYka 90 
                 +a+++k++e+++kk+ek+      +k+++++ k+++   +  +  ++  l+ ++ + ++e + +A+gid+a++aLs++  +++k+d+hpe+r+kAaY+ 
  KHJ34505.1  54 EAEAAKKAEQTRKKAEKDallaeeEKNARATPKNSKVAVKKSKglDLRDLDGEDVRSKKEFTLNATGIDNALDALSLAtgSAAKIDKHPERRFKAAYAI 152
                 7889999999999999995554321333333333333333333123333544553333357888*************54359***************** PP

     Ccdc124  91 feeeeLprlkeenp..gLrlsQlkqllkkewkkspeNPlNq 129
                 fee++L++++++    gLr++Q k+ ++ke++k+ +NP+Nq
  KHJ34505.1 153 FEERRLKEMDADGTgqGLRQNQKKEKIRKEFEKHEDNPFNQ 193
                 ************88779***********************9 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.57
     Ccdc124  96 Lprlkee 102
                 L+++ke 
  KHJ34505.1 205 LKQIKEK 211
                 3333322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2563  (0.142953); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 1739.18
//
Query:       KHJ34506.1  [L=654]
Description: putative transglutaminase-like superfamily protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.6e-07   30.6   0.0    7.5e-07   29.6   0.0    1.5  1  Transglut_core  Transglutaminase-like superfamily


Domain annotation for each model (and alignments):
>> Transglut_core  Transglutaminase-like superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.0   4.2e-11   7.5e-07      14     110 ..     347     452 ..     340     454 .. 0.82

  Alignments for each domain:
  == domain 1  score: 29.6 bits;  conditional E-value: 4.2e-11
  Transglut_core  14 plekakaiyewvrknveys.aprrtpgsrd..aeavletgkGncedfaslfvallRalGipaRvvtgyls....geeekeq.......svaseda 94 
                      ++ka+ai +w++ n++y+ ++   ++ ++  +e+++ +g ++c+++a +f a++  +G++a  ++g  +    +             ++ +   
      KHJ34506.1 347 ATDKARAIFTWLHYNIAYDvEAFFRNQIKSslPEDIIMSGLAVCIGYAGVFEAIAVKAGLEAISIIGHGKgfgfK-----PikpgepvPFCNPSG 436
                     569****************7555555554478*********************************9988733333.....145555888889999 PP

  Transglut_core  95 HawvevylegygWvpl 110
                     Haw+ v ++++ W  +
      KHJ34506.1 437 HAWNSVRIDNGEWKLI 452
                     ***********9*655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (654 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       624  (0.0348039); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 4656.29
//
Query:       KHJ34507.1  [L=510]
Description: putative phosphoglycerate mutase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-05   24.1   0.7        7.2    6.3   0.0    4.2  4  His_Phos_1  Histidine phosphatase superfamily (branch 1)


Domain annotation for each model (and alignments):
>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.8   0.0    0.0023        41       1      42 [.       8      53 ..       8      58 .. 0.79
   2 !    4.9   0.0     0.001        18      47      69 ..      85     107 ..      71     113 .. 0.71
   3 !    4.0   0.1     0.002        35     107     139 ..     345     380 ..     329     386 .. 0.72
   4 !    6.3   0.0    0.0004       7.2     131     163 ..     403     435 ..     392     452 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.0023
                EEEEE---BTTB--........TT----B-HHHHHHHHHHHHHHTT CS
  His_Phos_1  1 lyLvRHGetewnaegr....lqgrtdvpLteeGreqAealaerlag 42
                ++++RHG     a+           d+pLt  G  q + l++r+a+
  KHJ34507.1  8 IIVIRHGARLDAADPQwhltSPTPYDPPLTYGGWCQSKVLGARIAS 53
                6899***9999666543323445799*****************987 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.001
                 EEEE-SSHHHHHHHHHHHHCTT- CS
  His_Phos_1  47 aiysSplkRarqTaeliaealgl 69 
                 +i +Sp+ R++qT   i++ l  
  KHJ34507.1  85 VIHTSPFLRCVQTSIGISAGLAQ 107
                 459**********9999887765 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.002
                 HHH-GGG-B...S-BHHHHHHHHHHHHHHHHHHTTT CS
  His_Phos_1 107 dpadvrppg...gEsledvaaRvaaaleelaarheg 139
                 ++++++  g   gE +  +++R +a l++l+a +++
  KHJ34507.1 345 REPQAWGMGgeyGEEWSSMHKRFRAGLQKLVAWYQK 380
                 333333333467******************997776 PP

  == domain 4  score: 6.3 bits;  conditional E-value: 0.0004
                 HHHHHHTTTSEEEEEE-HHHHHHHHHHHHT--G CS
  His_Phos_1 131 eelaarhegetvlvVsHggvirallarllglpl 163
                 ee+++++ +  v++V+Hg+  +al+ +l++ p+
  KHJ34507.1 403 EEAVNKNTDLVVVLVTHGAGCNALIGALTNQPV 435
                 56677777777***************9998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       451  (0.0251548); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 3993.28
//
Query:       KHJ34508.1  [L=508]
Description: putative 30s ribosomal subunit s4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      9e-15   54.1   0.0    1.9e-14   53.1   0.0    1.5  1  S4        S4 domain
  ------ inclusion threshold ------
       0.17   11.7   0.0       0.38   10.6   0.0    1.5  1  S4_2      S4 domain


Domain annotation for each model (and alignments):
>> S4  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.1   0.0   2.1e-18   1.9e-14       1      47 [.     130     176 ..     130     176 .. 0.98

  Alignments for each domain:
  == domain 1  score: 53.1 bits;  conditional E-value: 2.1e-18
                 EEHHHHHHHTTSSSSHHHHHHHHHTTTEEETTEEE--TT-EE-TTCE CS
          S4   1 rRLdkvlarlglassrreArqlIehGrVlVNGkvvkdpsyrVkpgDv 47 
                 rRLd  ++r+++ass ++Arq++ hG+V+VNG++   p+y + pgD+
  KHJ34508.1 130 RRLDMAIFRSLFASSHKQARQMVVHGHVKVNGQKMEHPGYLLNPGDM 176
                 8********************************************96 PP

>> S4_2  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   4.3e-05      0.38      24      57 ..     146     179 ..     141     185 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 4.3e-05
        S4_2  24 geaKafiaegeVkvNGevetrRgkKlraGdvVei 57 
                  +a++++  g+VkvNG++ +  g  l +Gd+ ++
  KHJ34508.1 146 KQARQMVVHGHVKVNGQKMEHPGYLLNPGDMYQV 179
                 589*****************99999999998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       721  (0.0402142); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3610.95
//
Query:       KHJ34509.1  [L=530]
Description: putative major facilitator superfamily transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-35  122.4  26.6    6.4e-31  107.5  21.5    2.3  2  MFS_1     Major Facilitator Superfamily
    1.3e-06   27.5   6.2    1.3e-06   27.5   6.2    1.9  2  Sugar_tr  Sugar (and other) transporter


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.5  21.5   7.2e-35   6.4e-31       1     330 [.      24     443 ..      24     447 .. 0.77
   2 !   20.4  14.6   2.2e-08    0.0002      27     185 ..     348     516 ..     339     525 .. 0.79

  Alignments for each domain:
  == domain 1  score: 107.5 bits;  conditional E-value: 7.2e-35
       MFS_1   1 lllaaflsalarsilgpalplalaedlgispse......igllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrv 93 
                 l+++ ++  +a++ ++p +  ++ ed+gi++ e      +gll+++++++ + a +p+G +sd +Gr++v+l+gl+++al+++++ +a+++++ l++r+
  KHJ34509.1  24 LAICRICEPIAFMSIFPYVY-YMVEDFGIAKKEseisiyAGLLTSAFTIAEFSAGIPWGKVSDVIGRKPVILIGLAGTALSMMMFGLAPNFPVALLARA 121
                 68999***************.*********999999999999***************************************44444779999******* PP

       MFS_1  94 lqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllgglla.sslg...............Wravfyilaivsllafvlfllllpeep 176
                 l Gl  g +  +  +++  ++ k++++ra+ ++   + lG+ilgp+lgg+la  +++               + ++ +i++i+ ++++ +++l++ e++
  KHJ34509.1 122 LGGLLNGNMGVLQTTIAEMITDKSQQPRAYTIMPFVWCLGSILGPALGGALArPAISypsiftadsiwarfpYLLSNLICTIIIIFGVTIGILFFEETH 220
                 *************************************************99999999888888888886655555577777777777668888887777 PP

       MFS_1 177 perkrkspkeee..............................................kgtgpaplvp............awkallkdpvlwilliall 217
                 + +k  ++  +e                                              +        +              + +++++v+    i+++
  KHJ34509.1 221 RVKKYRRDPGLEagkwiiknisvwksiplplttkttqndnlsettsllhqnentnhscS--------SaepsientndnhTVSRVFTKQVI--TNIVCF 309
                 77777766666688999999999999999999988888888888888888665555442........24445556677888999*****66..333333 PP

       MFS_1 218 lfffgfsg.lltllply.................lqevlglsglllaglllallalvgail.allagrlsdrlgrrrrlllallllllaalglallavt 297
                 ++ + +++ l ++lp++                 +   +gls   ++g++l++ ++ ++++  ll+  l++rlg+     ++ ++  ++++++ ++++ 
  KHJ34509.1 310 GILAYHTMaLDSMLPIFlsypsplnksswsmpfkFSIGYGLS-TKEIGVILSFQGVYSMFAnVLLFPILARRLGALSLFRVISISYPVLYFLIPYFSLL 407
                 333222236888888865556666666666665557777777.455555555555555555555999999**998555555555555555555555555 PP

       MFS_1 298 ..ssavllllvlvliGf.glgfvfpsllalasdlap 330
                   s + l++++++++ + ++ +++ps + +++++ap
  KHJ34509.1 408 ppSLNYLGIYLIAVWKCtFSTLAYPSNAIMLANSAP 443
                 555666666688889996666668888888888876 PP

  == domain 2  score: 20.4 bits;  conditional E-value: 2.2e-08
       MFS_1  27 lgispseigllltlyalgaavaslpl.GrlsdrfGrrrvlllglllfalg.lllllfa...sslw.lllvlrvlqGlga.galfpagaaliadwfpk.e 117
                 +g+s  eig +l++ ++ +++a+++l   l+ r+G+ +++ +  +++ +  +l++ f+   +sl  l + l ++   +   +++p+ a+++a  +p   
  KHJ34509.1 348 YGLSTKEIGVILSFQGVYSMFANVLLfPILARRLGALSLFRVISISYPVLyFLIPYFSllpPSLNyLGIYLIAVWKCTFsTLAYPSNAIMLANSAPSfL 446
                 899999***********9999999996777888*****************6666668666655444444444433333326899999999999999966 PP

       MFS_1 118 ergraigllsagfslGailgpllggllasslg....Wravfyilaivsllafvlfllllpeepperkrkspk 185
                   g  +g++++++sl+ ++gp ++g+l+s +       ++++ ++++sl ++vl  +l+++++ +++   +k
  KHJ34509.1 447 SLGIINGVAASTASLSRAFGPTISGFLTSIGQntgySGLAWWCCCLISLTGAVL--CLYLRDEDNSPYLDEK 516
                 777777**********************55559996556699*********998..8888888887776655 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   6.2   1.5e-10   1.3e-06      16     162 ..      33     173 ..      32     225 .. 0.83
   2 ?   -6.2   4.9         2   1.8e+04     348     428 ..     411     493 ..     348     503 .. 0.44

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 1.5e-10
                 HHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHH CS
    Sugar_tr  16 tgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGi 114
                 +++++ f +++  + +fg  k++s +   s++ gl++s+f + ++  ++  g+++d++GRk+++li+ + +  + ++ ++a+   ++ v +++R l G+
  KHJ34509.1  33 IAFMSIFPYVYYMVEDFGIAKKES-E--ISIYAGLLTSAFTIAEFSAGIPWGKVSDVIGRKPVILIGLAGTALSMMMFGLAP---NFPVALLARALGGL 125
                 689999999999999999999997.3..469***************************************************...************** PP

                 HHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    Sugar_tr 115 gvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglgln 162
                   G   vl ++ +  i+ k+   +  ++  + + +G +++  +g +l+
  KHJ34509.1 126 LNGNMGVLQTTIAEMITDKSQQPRAYTIMPFVWCLGSILGPALGGALA 173
                 *99998888887777788877788888888888888888877776664 PP

  == domain 2  score: -6.2 bits;  conditional E-value: 2
                 .CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTH.HHHHHHHHHHHHHHHHHHHHHHHHHHCHHH.T-HHHHHHHHHHHH CS
    Sugar_tr 348 asivaivfialfialfalgwgpvpwvlvsElfpqsvR.skalaiavavnwlanflisllfpiiteaig.ggyvflvfaglavl 428
                  +++ i +ia++ + f++   p  +++++  +p+ +  ++   +a+ +  l+  +  ++  ++t+  +  gy++l + +++++
  KHJ34509.1 411 LNYLGIYLIAVWKCTFSTLAYPSNAIMLANSAPSFLSlGIINGVAASTASLSRAFGPTISGFLTSIGQnTGYSGLAWWCCCLI 493
                 45555566666666665555555555555544432211222233333333333333333333332222234555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       768  (0.0428356); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.40
# Mc/sec: 3927.64
//
Query:       KHJ34510.1  [L=392]
Description: putative glycosyl hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-45  156.1  14.4    3.1e-45  155.3  14.3    1.4  1  Glyco_hydro_76  Glycosyl hydrolase family 76
    3.5e-05   23.0   1.9      0.027   13.5   0.0    2.6  2  Glyco_hydro_88  Glycosyl Hydrolase Family 88
     0.0088   15.6   0.1       0.33   10.4   0.0    2.7  3  C5-epim_C       D-glucuronyl C5-epimerase C-terminus


Domain annotation for each model (and alignments):
>> Glyco_hydro_76  Glycosyl hydrolase family 76
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.3  14.3   5.3e-49   3.1e-45      83     353 ..     122     373 ..      25     383 .. 0.88

  Alignments for each domain:
  == domain 1  score: 155.3 bits;  conditional E-value: 5.3e-49
                     SSEHHHHHHHHHHHHHHHHH.....H--HHHHHHHHHHHHHHHHCB-SCSCCS-BBSEC..ESS--SEEEHHHHHHHHHHHHHHHHHH...--CH CS
  Glyco_hydro_76  83 tegnDDqafwglaamtaaernfpeptdepswLalAqavfntqasrwdeetcgGGlrWqiftwnsgydyknsisngplfqlaarLaryt...gnet 174
                     + ++DD ++w+l  ++a+ +     t++ ++L+ A  +fn + +   +  c+GG++W        ++y n+i+n  ++ +a+ La      + ++
      KHJ34510.1 122 NGFYDDEGWWALGWIQAYDV-----TKNSQYLQTAVDIFNDMNNATTTP-CNGGIWWDR-----DKTYVNAIANELYLSVASHLANRAqgsDRQK 205
                     669****************8.....9******************99775.*******87.....9********************8776878899 PP

                     HHHHHHHHHHHHHHHSCSBTTTS-B-SEEETTTCCEEEE---HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCEECTTEEEEEE-TT CS
  Glyco_hydro_76 175 YlewAekvwdWvedvgliddedwlvyDgasvednctdinklqwtYnqGtylsgaaylynaTgdekWldrvkgllnatlstffpdgnilyevacep 269
                     Y + A k w+W +++g+i ++d++++Dg+  + +c++ n + w+YnqG++l+g + l +aT d+++l  ++g++ a  +++ +++++l++  cep
      KHJ34510.1 206 YRQIAIKQWNWFNASGMI-NKDFNINDGL--TADCKNNNGTVWSYNQGVILGGLVELSKATSDSSYLRPAQGIALAGIKKLSDKDGVLHD-PCEP 296
                     ******************.*********8..899**************************************************99**99.9*99 PP

                     STTCCTTHHHHHHHHHHHHHHHH..SHHHHHHHHHHHHHHHHHHHTTTB...TTTSB-TTTTTSSCCHHHHHHHHCCHHH.... CS
  Glyco_hydro_76 270 sekcnnDqrsFkgilarwlaltaqlapetadtiepllrasaeaaakscsggsdgttcglkwlkgtwdgdaglgeqmsaleviqa 353
                     +  c +D ++Fkgi++r l +++++ap+ +  i +++  +a+ ++k++++  +++++g++w+ g + g a++ +q sa+ +i +
      KHJ34510.1 297 N--CGTDGTQFKGIFMRNLLALQKIAPNGK--ILSFITMNAASVWKNNRN--TDNQFGINWA-GPFIGPANASTQSSAMDAIVS 373
                     4..9*************99999*****866..*************99998..8899******.8899***********996544 PP

>> Glyco_hydro_88  Glycosyl Hydrolase Family 88
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   2.0   0.00056       3.4      32     174 ..     129     171 ..      92     220 .. 0.69
   2 !   13.5   0.0   4.6e-06     0.027      21      58 ..     239     276 ..     219     291 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.00056
                     HHHHHHHHHHHHHH--HHHHHHHHHHHHHCCCTTS-CTTSGGGTGHHHHHHHHHHHH-THHHHHHHHHHHHHHHHCS-B.TTS.B.SBTTSTTEE CS
  Glyco_hydro_88  32 GvflsglleayeatgdkeyldyakawadslideggktelelDdidigllllllyeltkderykeaaeeladyvlakpprtseGgfwhkkkepeql 126
                     G +  g ++ay+ t++++yl+ a ++++++ +  ++                                                           
      KHJ34510.1 129 GWWALGWIQAYDVTKNSQYLQTAVDIFNDMNNATTT----------------------------------------------------------- 164
                     555666666666666666666666666665555544........................................................... PP

                     ETHHHHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHHHBETTTSEB- CS
  Glyco_hydro_88 127 WlDgLfMaipllaklskvtgepkyldeaikqflltarhlfdpetGlyy 174
                                                              p +G  +
      KHJ34510.1 165 -----------------------------------------PCNGGIW 171
                     .........................................4444333 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 4.6e-06
                     SSTTCCE.HHHHHHHHHHHHHHHHH--HHHHHHHHHHH CS
  Glyco_hydro_88  21 lkkenewewtnGvflsglleayeatgdkeyldyakawa 58 
                     +++   w +++Gv+l+gl+e+ +at d+ yl  a+ +a
      KHJ34510.1 239 NNNGTVWSYNQGVILGGLVELSKATSDSSYLRPAQGIA 276
                     566678*************************9998876 PP

>> C5-epim_C  D-glucuronyl C5-epimerase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   5.5e-05      0.33      38      76 ..     135     176 ..     119     195 .. 0.79
   2 ?   -1.5   0.0      0.26   1.5e+03     150     172 ..     197     219 ..     179     238 .. 0.76
   3 ?    1.8   0.0     0.024   1.4e+02      21      72 ..     239     291 ..     217     297 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 5.5e-05
   C5-epim_C  38 llrAYeltgdekYlkaakkalksf...kipvekGGvlktled 76 
                 +++AY++t++++Yl++a    + +   ++++ +GG+ ++ ++
  KHJ34510.1 135 WIQAYDVTKNSQYLQTAVDIFNDMnnaTTTPCNGGIWWDRDK 176
                 689**************9987665111556668888887766 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.26
   C5-epim_C 150 kapnlarwdYhklhiellkaLak 172
                 +a   +r++Y ++ i++ ++ ++
  KHJ34510.1 197 RAQGSDRQKYRQIAIKQWNWFNA 219
                 44456678899999999888765 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 0.024
   C5-epim_C  21 lspGWlsamaqgqaisvllrAYeltgdekYlkaakk.alksfkipvekGGvlk 72 
                  ++G + +  qg ++  l++  ++t d++Yl+ a+  al+ +k  + k Gvl+
  KHJ34510.1 239 NNNGTVWSYNQGVILGGLVELSKATSDSSYLRPAQGiALAGIKKLSDKDGVLH 291
                 5566667889999999999999**********997537777888888888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (392 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       549  (0.0306208); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 3064.11
//
Query:       KHJ34511.1  [L=398]
Description: putative vacuolar protease a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     3e-107  358.7   0.0   3.6e-107  358.4   0.0    1.0  1  Asp             Eukaryotic aspartyl protease
    3.1e-15   56.9   2.7    3.6e-13   50.1   2.7    2.6  1  TAXi_N          Xylanase inhibitor N-terminal
    0.00047   20.7   0.0       0.29   11.8   0.0    3.3  3  Asp_protease_2  Aspartyl protease
  ------ inclusion threshold ------
      0.015   15.1   0.0       0.12   12.2   0.0    2.3  1  TAXi_C          Xylanase inhibitor C-terminal


Domain annotation for each model (and alignments):
>> Asp  Eukaryotic aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  358.4   0.0    8e-111  3.6e-107       1     314 [.      85     395 ..      85     396 .. 0.99

  Alignments for each domain:
  == domain 1  score: 358.4 bits;  conditional E-value: 8e-111
                 EEEEEEEETTTTEEEEEEEETT--SEEEEBTTESTSHCHHTSS-B-GGG-TT-EEEEEEEEEECTTSEEEEEEEEEEEEETTEEEEEEEEEEEEEESSH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp   1 eYfgeisiGtpeqkftvifDTGSsdlWVpsskckkssackshstydpskSstykkngkslsisYGdgsvsGflsqdtvkvggltvknqefgeatkepgs 99 
                 +Y++ei iGtp+q+f+v++DTGSs+lWVpsskc+ s+ac  h+ y++s Ss+y++ng+s++i+YG+gs+sGf+s+dtv++g+lt+k+q f+ea +epg 
  KHJ34511.1  85 QYYAEIAIGTPPQTFKVVLDTGSSNLWVPSSKCH-SIACFLHKSYKSSMSSSYRQNGSSFEIRYGSGSLSGFVSEDTVSIGDLTIKEQLFAEAVSEPGL 182
                 7********************************9.9*************************************************************** PP

                 HHTTSSSSEEEE-S-GGGSCGGSCCHHHHHHHTTSSSSSEEEEEE-STTSSEEEEEESSEEGGGEEEEEEEEEESSTSSTEEEEEEEEETTEEEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         Asp 100 tflaakfdGiLGlgfkeisveeatpvfdnlvsqglikepvfsvylnreeeeggeivfGgvDeskykGsltyvpvtskgywqielesvtvggktvlcssg 198
                  f+  +fdGiLGlgf++isv++++p+f+++v+qgl++epvfs+ l+  e++g+e++fGgvD + ++G++t +p+ +k+yw+++l+s+++g++t+   +g
  KHJ34511.1 183 AFAFGRFDGILGLGFDTISVNHIQPPFYTMVKQGLLDEPVFSFSLSDGENNGSEVIFGGVDAELFTGNITKLPLRRKAYWEVDLQSISFGNQTA-EFEG 280
                 *********************************************************************************************9.**** PP

                 EEEEEETTCSSEEEEHHHHHHHHHHHTTEEEETTCEEEEETTGGGGSEEEEEEETTEEEEEEGGGGEEEESSSTTSEEEESE....EECCTSSSEEEEH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxx RF
         Asp 199 cqailDtGTsllalptsivekiakaigakksesegeyvvdCdslsslpdisftiggakitvpvselvlkeeeseesqCilgl....vseeegdlwiLGd 293
                 + ailDtGTsl+ lp+++ e ++ +igak   + g+y v+C++ ++lp+++f+++g ++++++ +++l  +    ++Ci+g+    ++++ g+ +iLGd
  KHJ34511.1 281 TGAILDTGTSLIGLPSDVSELLNAEIGAKRGFN-GQYNVECSKREKLPNVTFNLSGYDFEITPYDYILDIQ----GTCISGFmgidIPSPAGPIVILGD 374
                 ****************************99999.**********************************998....69********************** PP

                 HHHTTEEEEEETTTTEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxx RF
         Asp 294 vFlrsayvvfdldnnrvglAe 314
                  Flr+ y+++dl+n +vglA+
  KHJ34511.1 375 AFLRKWYSIYDLGNATVGLAA 395
                 *******************97 PP

>> TAXi_N  Xylanase inhibitor N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   2.7   8.1e-17   3.6e-13       1     178 []      86     241 ..      86     241 .. 0.75

  Alignments for each domain:
  == domain 1  score: 50.1 bits;  conditional E-value: 8.1e-17
      TAXi_N   1 YlvsisiGtppqplklvvDtGsdltWvqCkpckacssqkkpvfdpsksstykavpcssslCk.aceasssaksgsssstceyeisygadgssssGvlat 98 
                 Y+++i iGtppq++k+v+DtGs+ +Wv                           +c+s +C  + + +ss +s+ +++  ++ei+yg  g s sG++++
  KHJ34511.1  86 YYAEIAIGTPPQTFKVVLDTGSSNLWVPS------------------------SKCHSIACFlHKSYKSSMSSSYRQNGSSFEIRYG-SG-SLSGFVSE 158
                 9***************************9........................34555555532244677777788888999****7.55.9******* PP

      TAXi_N  99 dtltlsstdgksvkvpnlvfG..CgksnlgglaagadGilGLGrgklSlvsqlaskg.......slgnkFsyCLssssssssgvlffGd 178
                 dt+++     +  ++++ +f+   ++  l   + + dGilGLG+  +S+       +         + +Fs  L s+ +++++ ++fG+
  KHJ34511.1 159 DTVSI-----GDLTIKEQLFAeaVSEPGLAFAFGRFDGILGLGFDTISVNHIQPPFYtmvkqglLDEPVFSFSL-SDGENNGSEVIFGG 241
                 *****.....5556665555521566777788889***********9975432211122222346688999999.99999999999996 PP

>> Asp_protease_2  Aspartyl protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   6.4e-05      0.29       8      89 ..      97     196 ..      88     197 .. 0.63
   2 ?   -2.4   0.0       1.8     8e+03      54      68 ..     262     276 ..     257     279 .. 0.81
   3 !    5.1   0.0    0.0078        35      11      38 ..     282     309 ..     273     362 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6.4e-05
  Asp_protease_2   8 kpvrfllDTGasttlispelaekl.......glkvreseltvrvsga...gge.vkarlvrldslklggltlknvpalvld..lg.....eeidg 84 
                     ++++++lDTG+s++ ++++  +++         +  +s++++ +s+     g+ + + +v  d++++g+lt+k++ ++ +   +g      + dg
      KHJ34511.1  97 QTFKVVLDTGSSNLWVPSSKCHSIacflhksYKSSMSSSYRQNGSSFeirYGSgSLSGFVSEDTVSIGDLTIKEQLFAEAVsePGlafafGRFDG 191
                     6899****************999877555543333333445555443222233355666777779999999999976544422232222235589 PP

  Asp_protease_2  85 lLGmd 89 
                     +LG+ 
      KHJ34511.1 192 ILGLG 196
                     98876 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.8
  Asp_protease_2  54 rlvrldslklggltl 68 
                      +v l+s+++g+ t+
      KHJ34511.1 262 WEVDLQSISFGNQTA 276
                     6789999***99886 PP

  == domain 3  score: 5.1 bits;  conditional E-value: 0.0078
  Asp_protease_2  11 rfllDTGasttlispelaeklglkvres 38 
                      ++lDTG s + +++++ e l+ +  ++
      KHJ34511.1 282 GAILDTGTSLIGLPSDVSELLNAEIGAK 309
                     589*************999998887775 PP

>> TAXi_C  Xylanase inhibitor C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.6e-05      0.12      74     158 ..     312     392 ..     262     395 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.6e-05
                 -S-EEETTS......-S----EEEEESSS-EEEE-GGGGEEE-SSSEEEE-EEE-...-S--SSSEEE-HHHHBTS-EEEETTTTEEE CS
      TAXi_C  74 felCynsselgstragpavPtitlvleggaewtisgenllvkveggvvClafves...gvagesavviGglqlednllvFDleksrlg 158
                 f+  yn +       ++++P++t++l  g +++i++ +++++++g   C+    +   +++  + v++G + l++ +  +Dl + ++g
  KHJ34511.1 312 FNGQYNVEC----SKREKLPNVTFNLS-GYDFEITPYDYILDIQGT--CISGFMGidiPSPAGPIVILGDAFLRKWYSIYDLGNATVG 392
                 444455555....67899*********.89************9997..876666668899999********************99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       331  (0.0184617); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 3244.44
//
Query:       KHJ34512.1  [L=622]
Description: putative ubiquitin-conjugating enzyme protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (622 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 4597.70
//
Query:       KHJ34513.1  [L=138]
Description: hypothetical protein EV44_g5029 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        7.6    6.9  52.2        0.3   11.4  33.8    4.8  2  CYSTM     Cysteine-rich TM module stress tolerance


Domain annotation for each model (and alignments):
>> CYSTM  Cysteine-rich TM module stress tolerance
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -7.2  10.4         1   1.8e+04       1       9 [.      15      23 ..       4      50 .. 0.60
   2 ?   11.4  33.8   1.7e-05       0.3       3      42 .]      73     138 .]      55     138 .] 0.69

  Alignments for each domain:
  == domain 1  score: -7.2 bits;  conditional E-value: 1
       CYSTM  1 ppqpgYyqq 9 
                pp+p Y + 
  KHJ34513.1 15 PPPPSYTPS 23
                344444433 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 1.7e-05
       CYSTM   3 q..pgYyqqppvqe........................qppqkgdgGclagClaALcCCclcdecf 42 
                 +   gYy+++p ++                        + + k+++G+ +g+laA++CCc++d +f
  KHJ34513.1  73 PsaAGYYAPYPGNPpngnfgqppygaynagarpqgqfaDNRGKSNPGFAEGLLAACACCCCLDLLF 138
                 13344555444444888888777777888887755554333456779****************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       335  (0.0186848); expected 358.6 (0.02)
Passed bias filter:                      133  (0.00741815); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1030.11
//
Query:       KHJ34514.1  [L=729]
Description: putative atp-dependent rna helicase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.4e-44  150.3   0.2    8.1e-44  149.5   0.2    1.4  1  DEAD        DEAD/DEAH box helicase
    1.7e-20   73.4   2.4    1.2e-19   70.7   0.0    3.1  4  Helicase_C  Helicase conserved C-terminal domain
    1.4e-05   25.2   0.1    2.5e-05   24.4   0.1    1.4  1  ResIII      Type III restriction enzyme, res subunit
  ------ inclusion threshold ------
      0.029   14.4   0.0       0.06   13.4   0.0    1.5  1  CMD         Carboxymuconolactone decarboxylase family
      0.066   13.4   0.0       0.27   11.4   0.0    2.0  2  Baculo_FP   Baculovirus FP protein


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.5   0.2   2.3e-47   8.1e-44       1     174 [.     108     293 ..     108     295 .. 0.91

  Alignments for each domain:
  == domain 1  score: 149.5 bits;  conditional E-value: 2.3e-47
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS............TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet............kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaa 87 
                 t++Q ++i+++l+g d++++a+TG+GKTl flip +q+++++             + +  +a+i++PtreLaeq++ ++ k++ ++dl v++ +gg+++
  KHJ34514.1 108 TEVQVATINEALQGVDIIAQARTGTGKTLGFLIPTIQNIIKHspelatrqrysrARPSDIRAIIISPTRELAEQIAVEADKLCYNTDLVVQVAVGGNSK 206
                 789*************************************9999999999988778888**************************************** PP

                 HHHHHHHH.TTCSEEEEEHHHHHHHH..HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHH CS
                 xxxxxxxx.xxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  88 rdqlskld.ngvdivvgtpgrlddll..stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvk 174
                 r+ l k + +g++++v+tpgrl dll  +   ++  ++++lVlDEadrlld+gfs++i+ri+n lp+   d  ++rq++++SAT+p++v 
  KHJ34514.1 207 RQMLMKTQrEGCHLLVATPGRLTDLLtdEYSGVRAPNLTTLVLDEADRLLDEGFSKDIERIINILPNR--DV-QDRQTLLFSATVPREVM 293
                 *******7356*************9955444477999****************************744..33.4678*********9886 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.4       0.5   1.8e+03      38      93 ..      86     151 ..      63     163 .. 0.64
   2 ?   -2.9   0.0       2.4   8.5e+03      19      73 ..     169     224 ..     161     224 .. 0.49
   3 ?   -0.1   0.0      0.31   1.1e+03       3      29 ..     264     292 ..     262     324 .. 0.69
   4 !   70.7   0.0   3.3e-23   1.2e-19      39     110 ..     397     474 ..     350     475 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.5
                 HTTSTEEEESTTSTHHHHHHHHHHHHTTSSS.EEEESGGGTS.........SSTSTTESEEEESSS CS
  Helicase_C  38 kkgikvavlhgelpqnereeileqfnkgesd.vLiatdvaer.........GidipkvnlVinfdl 93 
                  +++    +  +++q+ +++++++ +  +++  L   d++++         G  ip ++++i  ++
  KHJ34514.1  86 DFEMVHSNIIKQITQKMNLDTMTEVQVATINeALQGVDIIAQartgtgktlGFLIPTIQNIIKHSP 151
                 333333344445888888888888876666667777777777777777777777777777776665 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.4
                 EEEEESSHHHHHH....HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEES CS
  Helicase_C  19 ilifvntidrlek....vklllekkgikvavlhgelpqnereeileqfnkgesdvLiat 73 
                 ++i+++t++ +e+    ++ l+ + ++ v v       n+++++l + +++ +++L+at
  KHJ34514.1 169 AIIISPTRELAEQiaveADKLCYNTDLVVQV---AVGGNSKRQMLMKTQREGCHLLVAT 224
                 6666777765543332322222222222222...3334555556666655566677766 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.31
                 HHHHHHHH.HHTTTTSEEEEEESSHH.HH CS
  Helicase_C   3 leallell.kleeeggkilifvntid.rl 29 
                 +e+++++l ++ ++++++l+f+ t+  ++
  KHJ34514.1 264 IERIINILpNRDVQDRQTLLFSATVPrEV 292
                 678999999999999*******9998533 PP

  == domain 4  score: 70.7 bits;  conditional E-value: 3.3e-23
                 T......TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTTSSST CS
  Helicase_C  39 k......gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqriGRtgRa 110
                          +  +++g+++q+ r ++ ++f++ +s +L +tdv +rG+d+p+v++Vi+++lp n ++yi+r+GRtgR+
  KHJ34514.1 397 YnnhplkPAELYIINGSMTQEGRTRAANKFRACRSGMLFSTDVTARGMDFPGVSHVIQCGLPPNKEQYIHRVGRTGRG 474
                 1344555578899*******************9999*****************************************7 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.1   6.8e-09   2.5e-05      25     170 ..     122     289 ..      67     290 .. 0.81

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 6.8e-09
                 SEEEEEESTTSTHHHHH.HHHHHHH-S...................-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.........-SE CS
      ResIII  25 krglikmaTGtGKTlva.aklierllkkgkee..............kflflvprkslleqtleefkkflseaykeigkkvsgdkkka..kekdstnkki 106
                   ++ ++ TGtGKTl   + +i+++ k+ +e               +++++ p+++l eq   e  k+  +++  ++  v g++k++   + +++ +++
  KHJ34514.1 122 VDIIAQARTGTGKTLGFlIPTIQNIIKHSPELatrqrysrarpsdiRAIIISPTRELAEQIAVEADKLCYNTDLVVQVAVGGNSKRQmlMKTQREGCHL 220
                 3688999********98899999999987766999***************************999999999988888888888888888889999**** PP

                 EEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS....TTTHHHHHT---.....SEEEEEESS-S CS
      ResIII 107 lvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak...kswreilekfke.....avllglTATpe 170
                 lv+t  +l+  +   + e    +  +   ++ DEa rl ++   k +++i++ +++        l ++AT +
  KHJ34514.1 221 LVATPGRLTDLL---TDEYSGVRAPNLTTLVLDEADRLLDEgfsKDIERIINILPNrdvqdRQTLLFSATVP 289
                 ************...44555555555559***********86766888887666444444489999999986 PP

>> CMD  Carboxymuconolactone decarboxylase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   1.7e-05      0.06      10      67 ..     510     568 ..     504     570 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.7e-05
                 HHHHHCC.GSSTS-HHHHHHHHHHHHHHTT-HHHH.HHHHHHHHHTT--HHHHHHHHHHH CS
         CMD  10 lrealla.reggLdpkereLialavsaangceyCv.daHtraAleaGvteeeiaevlaqa 67 
                   ++ ++ ++ggL+p   e++a +++ + +c      a ++ Al++ +t+++ a ++++ 
  KHJ34514.1 510 AKFD-MSqDGGGLSPEVAEIMAEVAASTSRCTLRSkEAAYKSALNNIKTPDQAASLARWT 568
                 4444.45599***********************99**********************996 PP

>> Baculo_FP  Baculovirus FP protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   7.6e-05      0.27      90     140 ..     278     326 ..     261     332 .. 0.73
   2 ?   -2.3   0.0       1.2   4.4e+03      37      53 ..     350     366 ..     323     396 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.6e-05
   Baculo_FP  90 DakvkifvaatakyklLLkkvrkeLkptykyiwickdGvlarkseksriti 140
                 D ++ +f a     + ++  vrk+Lkp++ ++   k+G la +++  +  i
  KHJ34514.1 278 DRQTLLFSATV--PREVMSLVRKTLKPNFHFVQTVKEGELATHEKVPQNII 326
                 44555555433..35678889********************9987666555 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.2
   Baculo_FP  37 akLdlnvdhieektvkr 53 
                 ++L +++d +e+k +k 
  KHJ34514.1 350 SQLAVSLDGVEHKPFKA 366
                 35888999999998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (729 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.42
# Mc/sec: 5181.51
//
Query:       KHJ34515.1  [L=395]
Description: putative gpi-anchor transamidase precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-41  142.7   0.1    1.9e-41  142.3   0.1    1.1  1  Peptidase_C13  Peptidase C13 family


Domain annotation for each model (and alignments):
>> Peptidase_C13  Peptidase C13 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.3   0.1   1.1e-45   1.9e-41       1     227 [.      30     261 ..      30     279 .. 0.88

  Alignments for each domain:
  == domain 1  score: 142.3 bits;  conditional E-value: 1.1e-45
                    EEEEEEE---SGGGHHHHHHHHHHHHHHHCTT--GGGEEEEE---STT-TT-SSTT--BSSTT.--B-STT.--ESBEGGG-SHHHHHHHHHT-TC CS
  Peptidase_C13   1 lyavlvAGsngydnyrhqadvchayqllkkkglkdenivvvmydDiaereenPlagkiinkpk.gedvykg.vkidYtgkkvtkenflavllGdks 94 
                    ++avl++ s+ + nyrh a+v  +y+++k+ g++d +i+++  dD+a +++n ++g+++++ +   d+y   +++dY+g +vt enf+  l+   +
     KHJ34515.1  30 NWAVLISTSRFWFNYRHLANVLSLYRTVKRLGIPDSQIILMLPDDMACNPRNAFPGTVYSNSDrAVDLYGDnIEVDYRGYEVTVENFIRLLTDRVD 125
                    6**********************************************************88873589996659******************97544 PP

                    ..G.TT-------TTSEEEEEEES-EETTEEE-SSSSEEEHHHHHHHHHHHHHCT--SEEEEEEESTTGGGGTTTS-TTSSEEEEESS-TTS--BE CS
  Peptidase_C13  95 ..v.gsgkvlksgkeDnvfiyltdhGapgvlevpeeddleakdLaeaLkkmhakkkykklviyleaceSgsmfeellkdinvyaltAanadessfg 187
                      +  s+++l++    n+++y+t hG++++l++ + ++++a dLa+a+++m +kk+y++l++++++c++  m ++   + n++a+ +++ +ess++
     KHJ34515.1 126 eeMpRSKRLLTDD-RSNILVYMTGHGGNEFLKFQDAEEISAFDLADAFEQMWEKKRYHELLFMIDTCQANTMYSK-IYSPNIIATGSSEIEESSYS 219
                    3256667776665.569**********************************************************.99****************** PP

                    ECE.CTTTTCEEEEHHHH...HHHHHHHHS-TTT-BHHHHHHH CS
  Peptidase_C13 188 tycedeedgtylgdlfsv...awledsddedlsketlekqfel 227
                        d+++g    d + +   ++le+  + + sk+tl + f+ 
     KHJ34515.1 220 HHA-DNDIGVAVIDRYTYynlEFLENYVKDPSSKQTLGDLFDS 261
                    *76.888888888887761114555555678889999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       607  (0.0338558); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2846.61
//
Query:       KHJ34516.1  [L=397]
Description: putative 60s ribosomal protein l3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.6e-06   26.1   0.0    0.00017   21.8   0.0    2.3  2  Ribonucleas_3_3  Ribonuclease-III-like
      8e-05   23.2   0.1      0.001   19.6   0.0    2.7  2  Ribonuclease_3   Ribonuclease III domain
     0.0041   17.8   0.0     0.0095   16.6   0.0    1.6  1  dsrm             Double-stranded RNA binding motif
  ------ inclusion threshold ------
      0.085   13.0   0.0       0.18   11.9   0.0    1.5  1  DoxX_2           DoxX-like family


Domain annotation for each model (and alignments):
>> Ribonucleas_3_3  Ribonuclease-III-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0     0.055   2.5e+02      21      44 ..     120     143 ..     111     174 .. 0.85
   2 !   21.8   0.0   3.7e-08   0.00017      93     127 ..     246     280 ..     228     281 .. 0.86

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.055
  Ribonucleas_3_3  21 hNerLefLGdavLklsvseyllek 44 
                      +N  L+ LG+++L+  + eyl+  
       KHJ34516.1 120 NNAALARLGKSILSYHIGEYLICT 143
                      7999***********999998754 PP

  == domain 2  score: 21.8 bits;  conditional E-value: 3.7e-08
  Ribonucleas_3_3  93 ekvladaleAliGAiyldkgaevaqefveekilkk 127
                      ek +a  + AliGAiy+ +g ++a++f++++il++
       KHJ34516.1 246 EKACAGFVGALIGAIYVHAGRQTAKSFIKQYILSR 280
                      667788999**********************9976 PP

>> Ribonuclease_3  Ribonuclease III domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.3   5.6e+03      34      34 ..      76      76 ..      34     104 .. 0.59
   2 !   19.6   0.0   2.3e-07     0.001       2     105 .]     123     265 ..     122     265 .. 0.65

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.3
                    H CS
  Ribonuclease_3 34 l 34
                     
      KHJ34516.1 76 S 76
                    2 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 2.3e-07
                     HHHHHHHHHHHHHHHHHHHHHCTTSSHHHHHHHHHHHTSHHHHHHHH..............HCTTCHCCHCHH.....................H CS
  Ribonuclease_3   2 rLeflGDavlklaittylfetypdahegrlsklrsklvsnenlarla..............kklglpkflrasefdpprnwlppgy.......kl 75 
                     +L+ lG+++l ++i +yl++typ +    l ++  ++   ++l  +                + gl +f   s+ +p  n+ + g        + 
      KHJ34516.1 123 ALARLGKSILSYHIGEYLICTYPRLPLSVLFAASYAYNGPKTLQLITnewgveiaaapgpeVDPGLLQF---SKLQPGANIENTGPttrpdvkD- 213
                     5889**********************9999888777777777777774555554466665522233332...2233333333332232333330. PP

                     HCCSTTCHC..............................TSHHHHHHHHHHHHHHHHHCT CS
  Ribonuclease_3  76 sddekeddd..............................adkvladvvEAliGaiyldsg 105
                                                             +k  a  v AliGaiy++ g
      KHJ34516.1 214 --------YfrrgmssrlvyddefgdkmplvnnetapapTEKACAGFVGALIGAIYVHAG 265
                     ........134444444445555666677777788888899***************9876 PP

>> dsrm  Double-stranded RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   2.1e-06    0.0095       1      65 [.     293     358 ..     293     359 .. 0.90

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 2.1e-06
                 HHHHHHHHHHHTT.SEEEEEEEEEESSTSSSEEEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHH CS
        dsrm   1 pKskLqeycqkkg.kppnyeyvseegpphslpkFvvtvkvngklygsGvgsnKKeAeqsAAedale 65 
                 p+++L ++c ++g   p  ++ se+g  +  p F+v +  +  l gs +g++  eA ++A ++al+
  KHJ34516.1 293 PIRELARLCNREGfELPIARILSETGRWSRSPLFSVGIFSGQDLLGSSSGASLPEARIRACVAALK 358
                 7899*********7777777777777777777********************************97 PP

>> DoxX_2  DoxX-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   4.1e-05      0.18      58      87 ..     240     269 ..     233     278 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.1e-05
      DoxX_2  58 taprltplAavglallmvgAiathlrrgdp 87 
                 tap+ t+ A++g+++ ++gAi++h+ r+  
  KHJ34516.1 240 TAPAPTEKACAGFVGALIGAIYVHAGRQTA 269
                 478999******************987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       413  (0.0230353); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2835.06
//
Query:       KHJ34517.1  [L=497]
Description: putative domain-containing protein 5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.1e-36  124.2   0.0    1.2e-35  123.5   0.0    1.4  1  Cupin_8   Cupin-like domain
    1.7e-08   34.3   0.0    2.8e-05   23.8   0.0    2.2  2  Cupin_4   Cupin superfamily protein
    0.00029   21.2   0.0      0.003   18.0   0.0    2.3  1  JmjC      JmjC domain, hydroxylase


Domain annotation for each model (and alignments):
>> Cupin_8  Cupin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.5   0.0     2e-39   1.2e-35       6     249 ..     237     497 .]     232     497 .] 0.74

  Alignments for each domain:
  == domain 1  score: 123.5 bits;  conditional E-value: 2e-39
     Cupin_8   6 reyvakskPviikgalkdwp..alqkwtddeylleylkekaedvkvsvektpdgeadsfkeneelkfvkpeeeemtfkdflde.learrdtrsepyayl 101
                 +++    +P+ii++a+++wp  +++ w+   yll++     + v ++++++ ++e+              +++  tfk+f++  +   +++ s +  yl
  KHJ34517.1 237 SNFQLGPEPLIITEAVNHWPafCHHPWNCPSYLLSRTIGGRRLVPIEIGRSYIDEG-------------WSQKIITFKQFVETyITLDNTSGSYEKGYL 322
                 56777789************766788998777777666666666666655543332.............466778888888875455555556667788 PP

     Cupin_8 102 qnanlasefpelkedsdlp...fateafgkkpe....................avnlWlGnsasvsslHkDhyeNlycvvrGrKkftLfpPsdapflye 177
                 ++ +l s++p l+ d  +p   f      + p                      +n WlG++ +++ lH D+y+N++++v G+K ++L++P+++++ly+
  KHJ34517.1 323 AQYDLFSQIPLLRYDIAIPdycF-----VSVPTlqstsilaerysqvprleepLINAWLGPPSTITPLHTDPYHNILVQVVGKKYVRLYSPKESKNLYP 416
                 88888899999996644443221.....1111111222333344445555555999******************************************* PP

     Cupin_8 178 aslspt.edgtvvssvdve............epdlekfprlkdakkalevtlnaGevLylPalWfHeVkslaeeplhlavnywyd 249
                   ++++  d  ++s vdv             e   +kfp++++a + +++ l+aGe+L++P +W+H+V+sl  + ++ +v +w++
  KHJ34517.1 417 LGIDKNgIDMGNTSDVDVGtfagwdktkeeqEETRRKFPLFEEA-EFFDCILEAGECLFIPIGWWHYVRSL--S-VSFSVSFWFN 497
                 *65444134456777777677888887776655568********.9***********************99..5.8*******96 PP

>> Cupin_4  Cupin superfamily protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0   0.00024       1.4     117     156 ..     373     411 ..     359     431 .. 0.82
   2 !   23.8   0.0   4.6e-09   2.8e-05     154     209 ..     442     494 ..     433     497 .] 0.83

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.00024
                 EEEEE-TTBBSS-SEE-SSEEEEEEEEC-EEEEEE-SCCC CS
     Cupin_4 117 nvYatpggsqgvgpHyDdyDVfllQleGrkrWrvykptvp 156
                 n+++ p++ +  + H D+y   l+Q+ G+k+ r+y+p++ 
  KHJ34517.1 373 NAWLGPPS-TITPLHTDPYHNILVQVVGKKYVRLYSPKES 411
                 66666776.44566*********************86544 PP

  == domain 2  score: 23.8 bits;  conditional E-value: 4.6e-09
                 CCCTTSSSEE--TTCCG--S-SEEEEE-TT-EEEE-TT-EEEEEBBT-CCEEEEEE CS
     Cupin_4 154 tvpelelkseeplkildefepvedfvLepGDlLYlPrgviHqgvaedesltlSvgl 209
                 +++e++++++ +++ ++e+e  +d +Le+G  L++P g++H+ ++++  +++Sv++
  KHJ34517.1 442 KTKEEQEETRRKFPLFEEAE-FFDCILEAGECLFIPIGWWHYVRSLS--VSFSVSF 494
                 67788889999999999666.88***********************8..5555544 PP

>> JmjC  JmjC domain, hydroxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0     5e-07     0.003       5     112 ..     377     494 ..     374     496 .. 0.60

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 5e-07
                 E-TT-EEEEE--GGG-EEEEEEEEES-EEEEEE-GGGHHHHHHHHHHH...............HHCCSTTGCCTTTCEE-HHH.HHHTT---EEEEE-T CS
        JmjC   5 gmpksttpwhiedqglySinylhfgapkvWyiipeekkeklekvlskk...............nskeqpdllrhkstlispkq.lekegipvyrfvqkp 87 
                 g+p+++tp h++ ++     ++ +g++ v +  p+e k+ +   ++k+                     d+++++  + ++k  l +e  ++  +  ++
  KHJ34517.1 377 GPPSTITPLHTDPYHNI--LVQVVGKKYVRLYSPKESKNLYPLGIDKNgidmgntsdvdvgtfA---GWDKTKEEQEETRRKFpLFEE-AEFFDCILEA 469
                 66666666666666554..556666666666656555555553333333333332343333221...123345555556666654444.78999***** PP

                 T-EEEE-TT-EEEEEESSSEEEEEE CS
        JmjC  88 gefVfvfpgayHsvfnlgfniaeav 112
                 ge +f++ g++H v +l  ++++++
  KHJ34517.1 470 GECLFIPIGWWHYVRSLSVSFSVSF 494
                 ********************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (497 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 3700.71
//
Query:       KHJ34518.1  [L=91]
Description: hypothetical protein EV44_g2596 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (91 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       371  (0.0206927); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 679.50
//
Query:       KHJ34519.1  [L=294]
Description: putative pth11-like integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       305  (0.0170115); expected 358.6 (0.02)
Passed bias filter:                      242  (0.0134977); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.44
# Mc/sec: 2025.07
//
Query:       KHJ34520.1  [L=132]
Description: hypothetical protein EV44_g3335 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.014   15.1   0.0      0.014   15.1   0.0    1.1  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.1   0.0   7.6e-07     0.014     115     194 ..       3      84 ..       1     129 [. 0.81

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 7.6e-07
       RVT_2 115 LnkslyGlkqapllWne.kidkvLkklgferseaesGlyvrgtgegk.livalyvddlliagsdikiledvkkelakkfklk 194
                 + k lyG+  a++ W    +++  +kl++e s+    l v +  + +  iv + +dd +i +++   +++  + l+++f  k
  KHJ34520.1   3 VVKPLYGMAEAGTHWWAiYLKHQQEKLRMETSTFDPCLLVTSRENINfGIVRMQIDDTIILADEGFSVQEEERLLEAEFLAK 84 
                 6789********9876526899999***************99888785699**********999999998888888888554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (132 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1020.37
//
Query:       KHJ34521.1  [L=220]
Description: hypothetical protein EV44_g0283 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00061   19.4   0.0     0.0012   18.4   0.0    1.5  2  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0      0.35   6.3e+03     153     169 ..      55      70 ..      45      85 .. 0.64
   2 !   18.4   0.0   6.9e-08    0.0012       2      98 ..     146     215 ..     145     218 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 0.35
                 T-T......TEEECTTE CS
       RVT_1 153 elrkrakgvtllrYaDD 169
                 +l +++ +    +++DD
  KHJ34521.1  55 SLPEEV-KKRAELFMDD 70 
                 444432.4456778887 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 6.9e-08
                 E-TT.S-EEE.......-THHHHCTB--.........-------HHHH.............HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET CS
       RVT_1   2 pKkgpgsyRp.isllsvdykalnkliakrLkdvlekllsenqpgfrpgrstldavedllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvp 98 
                 +K+g ++ R  +     dy+aln++++          + +++p +++              l+   +ak++ k+D++ aF++ ++ +  +++taf+++
  KHJ34521.1 146 KKPG-SGLRFcV-----DYRALNAITNR---------DRYPLPLIEET-------------LRMASTAKWFFKVDVRVAFHRPRVTKGNECKTAFRTH 215
                 7999.99***55.....***********.........***********.............777899***************************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1717.15
//
Query:       KHJ34522.1  [L=265]
Description: hypothetical protein EV44_g4344 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2019.70
//
Query:       KHJ34523.1  [L=963]
Description: putative viral a-type inclusion protein repeat domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    0.00078   19.1  27.1    0.00078   19.1  27.1    7.1  8  MscS_porin    Mechanosensitive ion channel porin domain
      0.002   17.1  22.4      0.002   17.1  22.4    7.2  7  Spc7          Spc7 kinetochore protein


Domain annotation for each model (and alignments):
>> MscS_porin  Mechanosensitive ion channel porin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.6  13.3         2   1.8e+04      56     145 ..       2      96 ..       1     114 [. 0.73
   2 ?    2.2   6.4     0.013   1.1e+02      18     103 ..     209     295 ..     196     307 .. 0.73
   3 ?   -1.9  33.5      0.23     2e+03      35     194 ..     254     413 ..     249     413 .. 0.86
   4 ?   -5.4  30.6         2   1.8e+04      34     159 ..     314     437 ..     313     448 .. 0.74
   5 !   19.1  27.1   8.7e-08   0.00078       4     174 ..     437     614 ..     436     626 .. 0.87
   6 ?   -1.9  25.0      0.22     2e+03      11     158 ..     629     778 ..     620     812 .. 0.83
   7 ?   -9.3  25.7         2   1.8e+04      29     169 ..     735     879 ..     728     885 .. 0.80
   8 ?   -9.8  18.5         2   1.8e+04      39     158 ..     819     929 ..     779     938 .. 0.43

  Alignments for each domain:
  == domain 1  score: -5.6 bits;  conditional E-value: 2
  MscS_porin  56 lqqeleal.qkkkeeaskeilaklsleeLeqrllqtssqlqe.lqeqlaqlnsqlvelqtrperaqqqltearqrlqei...rnrLnstaaagea 145
                 ++qel++  +++ ++   e+ +++ ++e+eq+ +++s + ++ ++++l+++n++ +++++   +  + +t+a+ + ++    +++ + ++++++ 
  KHJ34523.1   2 ARQELKSQqKDERTDILSESENTQVTSEIEQETDKESPEFSRkTSNELKDENASERKIRSTNVKRNSNITTASSAKTTSssvNRNAAPLRQSSKS 96 
                 5899999944455555566666667899*********9998625789*******************99999998888872223333444444444 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.013
  MscS_porin  18 llqdLeqalnlLdkidkskkkaeelqkaiddaPkelrelqqelealqkkkeeaske.ilaklsleeLeqrllqtssqlqelqeqlaq 103
                 +  +L ++ + L ++ +s+  a+ l ++   ++ke++ l++ele  + k +++ ke ++a+  ++ L ++l+++ ++l+ ++e+l  
  KHJ34523.1 209 TSGSLSDHKKKLSTAPASAVSAKSLARKSSISTKEVDGLKAELEISAIKIDDQEKEiRIARENIDNLSKQLEEETNKLALTKENLRV 295
                 555677777778888888888888888888888888888888888866655555552578888888888888888888888877765 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.23
  MscS_porin  35 skkkaeelqkaiddaPkelrelqqelealqkkkeeaskeilaklsleeLeqrllqtssqlqelqeqlaqlnsqlvelqtrper..aqqqltearqrlqe 131
                 s+ k+++ +k i+ a + +++l+++le++  +k + +ke+l+    ee e+  ++ +  +q+lq++l   +s ++ +q  +++  a +q  ea++  ++
  KHJ34523.1 254 SAIKIDDQEKEIRIARENIDNLSKQLEEE-TNKLALTKENLRVAHNEEVEKLETDHKTMVQKLQSELERSQSAVADAQKNLAKsvADAQHNEASKNATA 351
                 67789999999999999999999999999.888888999999999999999999999999999999999999999999887654488888999999999 PP

  MscS_porin 132 irnrLnstaaage.alsqaqrtalqaelaaleaqieeleqellsnnnrqeLlklqrdllklriq 194
                 i+  L+++  + +  l +++   l+++ a+l +++ e e e +s n +++ +  q++ l++++q
  KHJ34523.1 352 IQE-LKDG-FELTlSLLNSEVEELRTNNASLASKLLEKEAEIQSLNSQITMAHDQQKALQQEHQ 413
                 988.8888.67777999999999**********************9999999999999998876 PP

  == domain 4  score: -5.4 bits;  conditional E-value: 2
  MscS_porin  34 kskkkaeelqkaiddaPkelrelqqeleal...qkkkeeaskeilaklsleeLeqrllqtssqlqelqeqlaqlnsqlvelqtrperaqqqltearqrl 129
                 k ++++e  q a++da+k l++  ++ +     +++++ +  ++  +l+l+ L++++++   + ++l ++l + ++++++l+++++ a+ q+ + +q+ 
  KHJ34523.1 314 KLQSELERSQSAVADAQKNLAKSVADAQHNeasKNATAIQELKDGFELTLSLLNSEVEELRTNNASLASKLLEKEAEIQSLNSQITMAHDQQKALQQEH 412
                 45556666666677777766666666555555566668888899999**************************************************** PP

  MscS_porin 130 qeirnrLnstaaagealsqaqrtalqaela 159
                 qe  + L ++      +++  +++ + +++
  KHJ34523.1 413 QESVSTLRQS-----LMEEKDQAMNKLRQE 437
                 **99999666.....333333333333333 PP

  == domain 5  score: 19.1 bits;  conditional E-value: 8.7e-08
  MscS_porin   4 elekak..ldeaeqkallqdLeqalnlLdkidkskkkaeelqkaiddaPkelrelqqeleal.qkkkeeaskeilaklsleeLeqrllqtssqlqelqe 99 
                 el+++   +++++ ++l++ L+++ + L +++++ kk+   +   +++  ++ +lq e ++l ++ +++++ ++  ++++++Le + ++  ++l++ +e
  KHJ34523.1 437 ELNDSAilQNDKKINELQDLLNKSEASLVEAEENHKKTV--ESHSKQYESKILNLQSEVSELkKEVEAKSVSQKTLNQTIKDLEDKCESLTEALENCRE 533
                 566666667899999******************999985..467788888888888888888555555577888889********************** PP

  MscS_porin 100 qlaqlnsqlvelqtrperaqqqltearqrlqeirnrL.nstaaage.....alsqaqrtalqaelaaleaqieeleqells 174
                 +l+    +l + +++ +++ q l+ a+ +l++++++L ++++  ++     +  + +  ++qael+a + + ee ++el  
  KHJ34523.1 534 ELQVSFGKLKKSEDSHSTISQDLSIANDKLAQVEAQLnKQGQMMKTfnedgESKDRLFKKTQAELEAANKKFEEKDKELGQ 614
                 *************************************8777777778889888888999*******************965 PP

  == domain 6  score: -1.9 bits;  conditional E-value: 0.22
  MscS_porin  11 deaeqkallqdLeqalnlLdkidks.kkkaeelqkaiddaPkelrelqqelealqkkkeeaskeilaklsleeLeqrllqtssqlqelqeqlaqlnsq. 107
                 +e e+k++++ L ++ + L++id+s k ++  l+++i +   e+ +lq+   +  ++ +++  ++++ l l+eL++  ++ + +l+ lq q a  n + 
  KHJ34523.1 629 SEDEKKQMKELLANHEKILKEIDDShKTEIGLLNEKIMEMESEILKLQNAHGKFIEELKNEACQDIKVLHLKELQNSPENCKTELSCLQYQEAGSNPDs 727
                 6789******************9763779*********************99999999**********************9999999998888777532 PP

  MscS_porin 108 ...lvelqtrperaqqqltearqrlqeirnrLnstaaagealsqaqrtalqael 158
                    +++l t    +  ql e +++l+e +++Lns+   ++ l+q++  + qa  
  KHJ34523.1 728 sltIQSLTTTSKDLEMQLEELNKKLAETQDKLNSS---QQYLAQEKIEKAQALA 778
                 2225788889999999****************999...5567777777666643 PP

  == domain 7  score: -9.3 bits;  conditional E-value: 2
  MscS_porin  29 LdkidkskkkaeelqkaiddaPkelrelqqeleal..qkkkeeaskeilaklsleeLeqrllqtssqlqelqeqlaqlnsqlvelqtrperaqqqltea 125
                  ++ ++ + ++eel+k++++ + +l + qq l+++  +k+++ a+ + l++ +l++Le+++   + +  e++e++ ++ ++  +l++   +  ++  e+
  KHJ34523.1 735 TTTSKDLEMQLEELNKKLAETQDKLNSSQQYLAQEkiEKAQALADLDALKHRKLDALENKIPICQLKEKETTEEIDEISANKFTLEQL-KKESKKNEEN 832
                 4566778889999999999999999999999999988899999999999999999999999999999999999988888887777654.4456677899 PP

  MscS_porin 126 rqrlqeirnrLnstaaage...alsqaqrtalqaelaaleaqieele 169
                 ++r ++++ + +++  + +   + ++++    +a l++ ea+i+el+
  KHJ34523.1 833 KKRYEDLECHMTGLVREANlkaKTAESRLKEVEALLKSKEAEISELK 879
                 99999998888776544446677888888888888888888888876 PP

  == domain 8  score: -9.8 bits;  conditional E-value: 2
  MscS_porin  39 aeelqkaiddaPkelrelqqeleal.qkkkeeaskeilaklsleeLeqrllqtssqlqelqeqlaqlnsqlvelq.trperaqqqltearqrlqeirnr 135
                 +e+l+k        +++ +++ +++ + +   +   + a+l+ ++ e+rl+++++ l + ++++++l+  ++e   t++  +    t+   +++ei+n+
  KHJ34523.1 819 LEQLKKE-------SKKNEENKKRYeDLECHMTGLVREANLKAKTAESRLKEVEALLKSKEAEISELKIGITENGmTSIKLV----TSEINKTKEIENE 906
                 2222222.......22222222222111222333344445555555555555555555555555555444443321222222....2222334455555 PP

  MscS_porin 136 Lnstaaagealsqaqrtalqael 158
                  + ++aa + l+qa+ ta+q+ +
  KHJ34523.1 907 QDHSSAALASLAQARFTAQQVTQ 929
                 55555555555555555555544 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.2   9.1       1.3   1.2e+04     167     282 ..       5     116 ..       2     138 .. 0.71
   2 !    6.8  18.4    0.0003       2.7     135     235 ..     242     346 ..     238     353 .. 0.79
   3 !   10.0  14.0   3.1e-05      0.28     137     224 ..     352     440 ..     348     443 .. 0.91
   4 !    7.3  20.9   0.00022       1.9     155     253 ..     441     538 ..     436     554 .. 0.88
   5 !   17.1  22.4   2.2e-07     0.002     138     281 ..     529     671 ..     528     690 .. 0.91
   6 ?   -0.2  13.9     0.042   3.7e+02     198     255 ..     728     785 ..     696     815 .. 0.47
   7 ?   -6.6  19.1         2   1.8e+04     175     276 ..     818     923 ..     799     939 .. 0.66

  Alignments for each domain:
  == domain 1  score: -5.2 bits;  conditional E-value: 1.3
        Spc7 167 ellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwse 265
                 el+ + + e++++ +e e+ q  +e  ++ dke+ e  r++ +elk e +       + ++   + +++i+++++ k++  +  ++a  +++  k++s 
  KHJ34523.1   5 ELKSQQKDERTDILSESENTQVTSEIEQETDKESPEFSRKTSNELKDENA----SERKIRSTNVKRNSNITTASSAKTTSSSVNRNAAPLRQSSKSISV 99 
                 55556666666777777777765555555667777777777777777766....444555555566667777777777777778888899999999999 PP

        Spc7 266 sevsrlkeevkaleelt 282
                 s v++l+++  +   ++
  KHJ34523.1 100 SSVRKLTAHSTTSSTKH 116
                 99999998877666555 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0003
        Spc7 135 qllegLkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqe....aaeelesidkeeLeelreelaelkaeieekkkelaelqeql 229
                 + ++gLk +le    +++++++++   +e++d+l ++leee ++l  + e+l+     ++e+le+  k+ +++l++el++ ++ ++  +k+la+  ++ 
  KHJ34523.1 242 KEVDGLKAELEISAIKIDDQEKEIRIARENIDNLSKQLEEETNKLALTKENLRVahneEVEKLETDHKTMVQKLQSELERSQSAVADAQKNLAKSVADA 340
                 6689**********************************************9998544455555556688888888888888888888888887766665 PP

        Spc7 230 eeleek 235
                 ++ e++
  KHJ34523.1 341 QHNEAS 346
                 555544 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 3.1e-05
        Spc7 137 legLkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelael.kaeieekkkelae 224
                 +++Lk+g e +l+ l+++ e+L  +++ l + l e e+e ++l++++++  ++++ l++  +e++ +lr++l e  ++ ++++++el++
  KHJ34523.1 352 IQELKDGFELTLSLLNSEVEELRTNNASLASKLLEKEAEIQSLNSQITMAHDQQKALQQEHQESVSTLRQSLMEEkDQAMNKLRQELND 440
                 799********************************************************************976515667777887765 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.00022
        Spc7 155 kelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaea 253
                 ++ L ++ ++++el + l++ +a+l e  e+ ++ +e++++  + ++ +l++e++elk+e+e+k+   ++l++ +++le+k e+l+e  ++++ee++ +
  KHJ34523.1 441 SAIL-QNDKKINELQDLLNKSEASLVEAEENHKKTVESHSKQYESKILNLQSEVSELKKEVEAKSVSQKTLNQTIKDLEDKCESLTEALENCREELQVS 538
                 4444.566789999999********999999999999999999****************************************************9855 PP

  == domain 5  score: 17.1 bits;  conditional E-value: 2.2e-07
        Spc7 138 egLkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeelesidkeeLeelreelaelkaeieekkkelaelqeqleeleeki 236
                 e+ +e+l+  + +l++ ++  +   + l+ + ++l + +a+l+++ +++++++e+ es +    ++++ el++++++ eek kel +l+e   +l++++
  KHJ34523.1 529 ENCREELQVSFGKLKKSEDSHSTISQDLSIANDKLAQVEAQLNKQGQMMKTFNEDGES-KDRLFKKTQAELEAANKKFEEKDKELGQLEEIFSSLQKEL 626
                 5667888999999999999999999999999999999999999999999999999666.556789********************************** PP

        Spc7 237 eelkeqkseleeeiaeaervleeckgwsesevsrlkeevkaleel 281
                 +  +++k++++e +a++e++l+e  ++ ++e+  l+e+  ++e++
  KHJ34523.1 627 AISEDEKKQMKELLANHEKILKEIDDSHKTEIGLLNEKIMEMESE 671
                 **************************************9999976 PP

  == domain 6  score: -0.2 bits;  conditional E-value: 0.042
        Spc7 198 keeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaer 255
                 +  +++l  + ++l+ ++ee++k+lae q++l+++++ +++ k +k+++ +++ + ++
  KHJ34523.1 728 SLTIQSLTTTSKDLEMQLEELNKKLAETQDKLNSSQQYLAQEKIEKAQALADLDALKH 785
                 4444444444444444444444555555555555555554444444444444443332 PP

  == domain 7  score: -6.6 bits;  conditional E-value: 2
        Spc7 175 ekaeleeeleklqeaaeeles..id.keeLeelreelaelkaeieekkkelaelqeqleeleekiee.lkeqkseleeeiaeaervleeckgwsesevs 269
                   ++l++e +k +e ++  e+  +     ++e+  + +++++ ++e ++ l+++++++ el+  i+e   ++++ + +ei++ +++ +e+ ++s+   s
  KHJ34523.1 818 TLEQLKKESKKNEENKKRYEDleCHmTGLVREANLKAKTAESRLKEVEALLKSKEAEISELKIGITEnGMTSIKLVTSEINKTKEIENEQDHSSAALAS 916
                 345777777777776666665444446777888888888888888888888888888888888776514678888888888877777766666655444 PP

        Spc7 270 rlkeevk 276
                   ++++ 
  KHJ34523.1 917 LAQARFT 923
                 4444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (963 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      4110  (0.229238); expected 358.6 (0.02)
Passed bias filter:                      549  (0.0306208); expected 358.6 (0.02)
Passed Vit filter:                       240  (0.0133861); expected 17.9 (0.001)
Passed Fwd filter:                       113  (0.00630264); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 3.62u 0.41s 00:00:04.03 Elapsed: 00:00:00.81
# Mc/sec: 3592.77
//
Query:       KHJ34524.1  [L=280]
Description: hypothetical protein EV44_g4152 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       380  (0.0211947); expected 358.6 (0.02)
Passed bias filter:                      263  (0.014669); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 2098.33
//
Query:       KHJ34525.1  [L=547]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (547 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       456  (0.0254337); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.21s 00:00:00.70 Elapsed: 00:00:00.36
# Mc/sec: 4577.35
//
Query:       KHJ34526.1  [L=644]
Description: putative ank-repeat protein mbp1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.3e-16   57.8   1.8    2.3e-05   24.6   0.1    4.7  4  Ank        Ankyrin repeat
    1.2e-15   57.6   2.0    5.7e-06   26.8   0.2    3.6  3  Ank_4      Ankyrin repeats (many copies)
    3.6e-15   56.3   2.4    1.1e-06   29.1   2.4    2.5  2  Ank_2      Ankyrin repeats (3 copies)
    7.9e-14   51.6   2.2    5.9e-08   32.8   0.1    3.2  3  Ank_5      Ankyrin repeats (many copies)
    1.7e-13   49.4   1.9     0.0019   18.5   0.1    4.8  4  Ank_3      Ankyrin repeat
    1.9e-06   27.7   2.4    7.7e-06   25.7   0.2    2.9  2  KilA-N     KilA-N domain
  ------ inclusion threshold ------
      0.017   15.7   1.3        6.4    7.4   0.1    3.1  3  Sod_Ni     Nickel-containing superoxide dismutase
      0.088   12.9   6.5       0.14   12.3   0.6    3.1  3  MbeD_MobD  MbeD/MobD like
        1.1   10.0   3.5        6.2    7.6   1.1    2.8  2  DUF4162    Domain of unknown function (DUF4162)


Domain annotation for each model (and alignments):
>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   7.8e-07    0.0016       2      28 ..     239     266 ..     238     270 .. 0.88
   2 !    7.0   0.0    0.0044       8.7       2      22 ..     272     299 ..     271     307 .. 0.73
   3 ?    3.0   0.2     0.078   1.6e+02       4      17 ..     311     328 ..     310     343 .. 0.69
   4 !   24.6   0.1   1.2e-08   2.3e-05       2      32 .]     360     391 ..     359     391 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 7.8e-07
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTT CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnln 28 
                 G+T+LH+Aa  g+++ii++L  +GAn+ 
  KHJ34526.1 239 GHTALHWAAAMGDVEIIRDLKrYGANIG 266
                 9*******989*********988**985 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.0044
                 SBBHHHHHH....HHTT...HHHHHHHH CS
         Ank   2 GnTPLHlAa....tngk...kriiklLL 22 
                 G TPL++++    + +k   ++++ +L+
  KHJ34526.1 272 GETPLMRCVlftnCQDKltmPDVVDELI 299
                 99*****779876334477777999998 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.078
                 BHHHHHH....HHTTHHH CS
         Ank   4 TPLHlAa....tngkkri 17 
                 T+LH Aa    ++ k+++
  KHJ34526.1 311 TALHHAAaitaSRHKHSC 328
                 9***98877773333333 PP

  == domain 4  score: 24.6 bits;  conditional E-value: 1.2e-08
                 SBBHHHHHHHHTTHHHHHHHHTT..TSTTCBTT CS
         Ank   2 GnTPLHlAatngkkriiklLLhG..Anlnaldn 32 
                 GnT+LH+Aa ++   ++++L+ G  A++n+++n
  KHJ34526.1 360 GNTALHIAAKYKARKCVRALI-GrnASINIKNN 391
                 9********555555******.545******97 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0     7e-09   1.4e-05       2      47 ..     240     284 ..     239     287 .. 0.93
   2 !   26.8   0.2   2.8e-09   5.7e-06       2      55 .]     310     380 ..     309     380 .. 0.92
   3 !    7.1   0.0    0.0042       8.3      15      39 ..     374     397 ..     370     399 .. 0.93

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 7e-09
       Ank_4   2 ltaLhyaaisgrlelvrlLlekgadinaqdnrsGetalhiAakrgn 47 
                 +taLh+aa++g++e++r L  +ga+i  q n++Get+l +++++ n
  KHJ34526.1 240 HTALHWAAAMGDVEIIRDLKRYGANIGFQ-NARGETPLMRCVLFTN 284
                 79******************99*******.************9977 PP

  == domain 2  score: 26.8 bits;  conditional E-value: 2.8e-09
       Ank_4   2 ltaLhyaai....sgrlelvrlLl...ekgad...........inaqdnrsGetalhiAakrgnveilklLl 55 
                  taLh+aa+      ++ ++r+ l   +++++           ina  +++G+talhiAak    ++++ L+
  KHJ34526.1 310 ATALHHAAAitasRHKHSCARYYLdilQNKIQevyepqfaaqiINAK-DIEGNTALHIAAKYKARKCVRALI 380
                 589*********999999999999777788889*************9.***************999999997 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0042
       Ank_4  15 elvrlLlekgadinaqdnrsGetal 39 
                 ++vr L+ ++a+in   n++G ta 
  KHJ34526.1 374 KCVRALIGRNASINIK-NNDGVTAE 397
                 68*************9.******96 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   3.4e-09   6.7e-06      21      74 ..     230     300 ..     202     307 .. 0.75
   2 !   29.1   2.4   5.7e-10   1.1e-06      11      83 .]     293     390 ..     285     390 .. 0.71

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 3.4e-09
       Ank_2  21 dpn...k.ngktaLhyAakngnleivklLleh......adndgrtpLhyAars.g......hleivklLle 74 
                 +p+   + +g+taLh+Aa  g++ei++ L  +      ++  g+tpL+ ++ + +       +++v+ L+e
  KHJ34526.1 230 NPDwiiDnQGHTALHWAAAMGDVEIIRDLKRYganigfQNARGETPLMRCVLFtNcqdkltMPDVVDELIE 300
                 344544259*********************977667766689*********99523444445778888774 PP

  == domain 2  score: 29.1 bits;  conditional E-value: 5.7e-10
       Ank_2  11 elvklLlegadpnk.ngktaLhyAak...ngnl.eivklLle....h................adndgrtpLhyAarsghleivklLlekgadinlkd 83 
                 ++v+ L+e  d+ + ++ taLh+Aa    + ++  ++++ l+    +                 d +g+t+Lh+Aa+++  ++v+ L+ ++a+in+k+
  KHJ34526.1 293 DVVDELIETIDLVDfCHATALHHAAAitaSRHKhSCARYYLDilqnKiqevyepqfaaqiinaKDIEGNTALHIAAKYKARKCVRALIGRNASINIKN 390
                 688888844332234579****888844423443678999987665154555666666664433377***********999*******889****996 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   5.1e-06      0.01      13      53 ..     236     276 ..     232     277 .. 0.93
   2 ?   -0.3   0.1      0.72   1.4e+03      13      24 ..     306     317 ..     298     320 .. 0.70
   3 !   32.8   0.1   2.9e-11   5.9e-08       9      52 ..     353     396 ..     350     399 .. 0.93

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 5.1e-06
       Ank_5  13 dgggntpLhvAakygaadvvrlLlargadlnltdsrGltal 53 
                 d+ g t+Lh+Aa  g  +++r L  +ga+++ +++rG+t+l
  KHJ34526.1 236 DNQGHTALHWAAAMGDVEIIRDLKRYGANIGFQNARGETPL 276
                 56667***********************************8 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.72
       Ank_5  13 dgggntpLhvAa 24 
                 d +  t+Lh+Aa
  KHJ34526.1 306 DFCHATALHHAA 317
                 344459****98 PP

  == domain 3  score: 32.8 bits;  conditional E-value: 2.9e-11
       Ank_5   9 vnrldgggntpLhvAakygaadvvrlLlargadlnltdsrGlta 52 
                 +n++d +gnt+Lh+Aaky a  +vr L+ r+a++n+++++G ta
  KHJ34526.1 353 INAKDIEGNTALHIAAKYKARKCVRALIGRNASINIKNNDGVTA 396
                 6899************************************9776 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   3.6e-06    0.0073       2      29 ..     239     265 ..     238     267 .. 0.94
   2 !    7.5   0.0    0.0037       7.3       2      23 ..     272     300 ..     271     306 .. 0.83
   3 ?    2.2   0.2      0.19   3.8e+02       3      13 ..     310     320 ..     308     340 .. 0.74
   4 !   18.5   0.1   9.7e-07    0.0019       1      31 []     359     388 ..     359     388 .. 0.96

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 3.6e-06
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgadv 29 
                 G t+Lh+Aa  g++ei++ L + +ga++
  KHJ34526.1 239 GHTALHWAAAMGDVEIIRDLKR-YGANI 265
                 89********************.9**98 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0037
       Ank_3   2 GetpLhlAarsgnl.......eivkfLle 23 
                 GetpL+++++++n+       ++v+ L+e
  KHJ34526.1 272 GETPLMRCVLFTNCqdkltmpDVVDELIE 300
                 9*************887766557999999 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.19
       Ank_3   3 etpLhlAarsg 13 
                  t+Lh+Aa  +
  KHJ34526.1 310 ATALHHAAAIT 320
                 69***999765 PP

  == domain 4  score: 18.5 bits;  conditional E-value: 9.7e-07
       Ank_3   1 nGetpLhlAarsgnleivkfLlenkgadvna 31 
                 +G+t+Lh+Aa++   + v++L+  ++a +n+
  KHJ34526.1 359 EGNTALHIAAKYKARKCVRALIG-RNASINI 388
                 69*********************.9***996 PP

>> KilA-N  KilA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.2   3.9e-09   7.7e-06       7      91 ..      30      94 ..      26     108 .. 0.77
   2 ?   -2.7   0.2       2.5     5e+03      32      59 ..     526     554 ..     502     582 .. 0.68

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 3.9e-09
      KilA-N  7 eiiirrvkdgyinatkllkaaaedtkriddWlrnkstkelleeleedynisekkksektisenrkakpgrlqGtYvhpdlalava 91
                e ++rr+ d++inat++lkaa+ d+   +++l+ +  ke +e+++  y+                    ++qGt+v+ +   a+a
  KHJ34526.1 30 EHVMRRRGDDWINATHILKAAGFDKPTRTRILEREVQKEKHEKIQGGYG--------------------KYQGTWVPLEQGQALA 94
                78999999*************5444444888888888888888887755....................5788888777666666 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.5
      KilA-N  32 kriddWlrnkstkelleeleedynise.k 59 
                 k++  ++++++ + l   +e++y++s+ +
  KHJ34526.1 526 KKLLSFIEKQQKIRLQISYENYYKDSGaN 554
                 55666777777777777777777776544 PP

>> Sod_Ni  Nickel-containing superoxide dismutase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       5.2     1e+04      31      61 ..     170     200 ..     152     213 .. 0.47
   2 ?    7.4   0.1    0.0032       6.4      77     121 ..     301     345 ..     267     350 .. 0.87
   3 ?    5.8   0.0    0.0098        20      88     125 ..     434     471 ..     424     473 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 5.2
      Sod_Ni  31 kkiaeledkesdaakqnqlsRlvaiKEehae 61 
                 + i+e+ +   ++++q + +R +++  e+++
  KHJ34526.1 170 TDIHESYELLPQTSSQRKRKRSTNTAHEQSH 200
                 2333333333344455555555555544444 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0032
      Sod_Ni  77 aqrlekypelhelvhkvmkaaskakqevdkekaeeLlekveelae 121
                 +  l ++ ++ +l+h+++ +as+ k+++ + + + L++k++e+ e
  KHJ34526.1 301 TIDLVDFCHATALHHAAAITASRHKHSCARYYLDILQNKIQEVYE 345
                 556789999*******************************99875 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0098
      Sod_Ni  88 elvhkvmkaaskakqevdkekaeeLlekveelaeifwe 125
                 e  hk  +  s+a  +++++ a +L+e +++lae f e
  KHJ34526.1 434 EEPHKKSHYISEAAMSIQSKVAPQLMERIQDLAESFDE 471
                 5568888889999999******************9975 PP

>> MbeD_MobD  MbeD/MobD like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.6   7.1e-05      0.14       6      56 ..     456     506 ..     452     516 .. 0.89
   2 ?   -0.6   0.8      0.75   1.5e+03       4      32 ..     524     550 ..     521     586 .. 0.45
   3 ?    2.2   0.1     0.097   1.9e+02      11      66 ..     573     624 ..     564     628 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 7.1e-05
   MbeD_MobD   6 kqLLsAlEqLQqdYeqrlqeWesafaelqrmfeltqrenaaLseqvtgLsq 56 
                  qL+  +  L + +   l+e + + +e +r+ ++t  ena L++qvtgL +
  KHJ34526.1 456 PQLMERIQDLAESFDEELKEKDASEQEARRILNVTISENADLEQQVTGLQK 506
                 5888889999999************************************76 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.75
   MbeD_MobD   4 lekqLLsAlEqLQqdYeqrlqeWesafae 32 
                 ++k+LLs +E+ Q+     +  +e+ +++
  KHJ34526.1 524 IQKKLLSFIEKQQKIRL--QISYENYYKD 550
                 56777777776554222..2223333333 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.097
   MbeD_MobD  11 AlEqLQqdYeqrlqeWesafaelqrmfeltqrenaaLseqvtgLsqQVesLseqvr 66 
                  lE LQ     ++q+   ++ + + m +  ++ +   ++ v+ L   V +  e+++
  KHJ34526.1 573 TLEDLQ----NQRQALLTSYIDARSMTGGSEKSELYRRALVKSLGSDVSHVDENLD 624
                 466666....57788889999*****999888887788889999999999888776 PP

>> DUF4162  Domain of unknown function (DUF4162)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.31   6.3e+02      30      64 ..     376     410 ..     347     413 .. 0.75
   2 ?    7.6   1.1    0.0031       6.2      13      64 ..     485     539 ..     480     541 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.31
                 -EEEE-TTS-EEEEE-----------------EEE CS
     DUF4162  30 veeveeeggelelkledeeaanellkaltsgveir 64 
                 v+ +  ++ ++++k +d+++a++l++ l++  +i+
  KHJ34526.1 376 VRALIGRNASINIKNNDGVTAEDLIRLLNETRRIE 410
                 55555566779999999**********98766665 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0031
                 SEEEEE..-------..---EEEE-TTS-EEEEE--.---------------EEE CS
     DUF4162  13 nrieve..adaeelleepgveeveeeggelelkled.eeaanellkaltsgveir 64 
                 ++++v+  ++a+  +++ g+++++e+ ++ +l l++ ++ +++ll+ ++++ +ir
  KHJ34526.1 485 RILNVTisENADLEQQVTGLQKMKENSDTTTLNLNElDSIQKKLLSFIEKQQKIR 539
                 5555666366777777899******99*********************8877775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (644 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1565  (0.0872888); expected 358.6 (0.02)
Passed bias filter:                      652  (0.0363657); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.41
# Mc/sec: 4690.56
//
Query:       KHJ34527.1  [L=325]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       697  (0.0388756); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2470.02
//
Query:       KHJ34528.1  [L=280]
Description: putative 14-3-3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-11   44.3   0.1      7e-11   42.1   0.0    1.9  2  14-3-3    14-3-3 protein


Domain annotation for each model (and alignments):
>> 14-3-3  14-3-3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.04   7.2e+02      86     119 ..      70     104 ..      46     112 .. 0.80
   2 !   42.1   0.0   3.9e-15     7e-11     133     216 ..     188     271 ..     185     275 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.04
                 HHHHHHHHHHHCCHCH..-SHHHHHHHHHHHHHHH CS
      14-3-3  86 iceevlelldktlipk.atseeskvfylkmkgDyy 119
                 + +e l++l+++++p  a+  e k   +k+++ +y
  KHJ34528.1  70 LAREGLKILEEYVLPMvANYGEPKTLSYKLRASFY 104
                 56788999*****9652588999999999998876 PP

  == domain 2  score: 42.1 bits;  conditional E-value: 3.9e-15
                 HHHHHHHHHHHHHHHHHHTTTGCC-HHHHHHHHHHHHHHHCTT--HHHHHHHHHHHHHCCHCCCCCS.TTTHHHHHHHHHHHHH CS
      14-3-3 133 eaaekakeaYeeAleiakkelqpthpirLglaLNySVflyeilnspekAcelakkafdeaiaeldelseesykdstlilqlLrd 216
                 ++ + a+++++eA+ +a+++l  +hpirL+++++y+ f +e l++ e++ +lak+++ e +++ + +++e+  ds +++++L +
  KHJ34528.1 188 DYRSTARHCFQEAIVLADQYLYGSHPIRLSIMVEYATFIFECLHDCEESRQLAKTTIAEVFNAQEGIDNETFTDSIQLVNILGK 271
                 56778999************************************************************************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2144.12
//
Query:       KHJ34529.1  [L=819]
Description: putative mannosyl-oligosaccharide glucosidase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.2e-168  561.1   4.8   2.3e-167  557.7   4.8    2.0  1  Glyco_hydro_63   Glycosyl hydrolase family 63 C-terminal doma
    1.8e-76  257.2   0.1    4.6e-76  255.9   0.0    1.7  2  Glyco_hydro_63N  Glycosyl hydrolase family 63 N-terminal doma


Domain annotation for each model (and alignments):
>> Glyco_hydro_63  Glycosyl hydrolase family 63 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  557.7   4.8  2.5e-171  2.3e-167       4     491 .]     305     800 ..     302     800 .. 0.96

  Alignments for each domain:
  == domain 1  score: 557.7 bits;  conditional E-value: 2.5e-171
                     HHHHHHHHHHHHHHHHHHHHH----S--S-HHHHHHHHHHHHHHHHHT-EEEEEEEEE--S..S---TT--S---................EEEE CS
  Glyco_hydro_63   4 eelseklekkkkefeekfekkFklkekldlekeelklakealsnllGgigyfyGdslvkre..svleedefvkyk................paeL 80 
                     ++++e +ek++k+  ++f++kFkl+ ++d++ + +k a + +snllGg+gyfyGdslv+r   s++ e++ + ++                p eL
      KHJ34529.1 305 DKITELIEKNSKAYWQQFDAKFKLQPPFDTN-QFQKCASSLFSNLLGGLGYFYGDSLVDRSyaSEY-EERNEGFWketadararkleklegPSEL 397
                     68999**********************8765.67899**********************9854333.33444455678899999999999***** PP

                     EE--SBTTTB-SEEHHHHHHHHHHHHHH-HHHHHHHHHHHHTT--TT----SEE--HHHHHTTS-GGGTEE-TT-----HHHHHHHHHHHHHH.. CS
  Glyco_hydro_63  81 ftavPsRpfFPRGFlWDeGFhqllilkwdvdltleilasWldlinedGWipReqilgaearskvPeefvvqkpeianPPtlllalkklleklk.. 173
                      t+vPsRpfFPRGFlWDeGFh+++i +wd dl+lei++sW+ l++edGWi+Reqilg earskvP+ef+vq+p+ an Pt++++++ l+ k++  
      KHJ34529.1 398 LTMVPSRPFFPRGFLWDEGFHLIPIIDWDLDLVLEIIQSWFTLMDEDGWIGREQILGPEARSKVPSEFQVQYPHYANAPTFFIVVEILIAKFEal 492
                     *********************************************************************************************** PP

                     ...............---HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTB---STT..........B--TT--SS.......--GGGS-TTS--- CS
  Glyco_hydro_63 174 ...............lekvsekekeklleflkklyprlkkwfewfrktqkGkleet..........yrWrGRdatakrelnpktLasGlDDyPRa 243
                                     ++   +++e  ++f + lyp+lkk+++w+rktq G+l+++          yrWrGR ++       + L+sGlDDyPR 
      KHJ34529.1 493 nnnggangtyipkleEDSEYLRSPELAQQFFRGLYPKLKKHYNWYRKTQVGDLDSYdriafssqeaYRWRGRSEQ-------HVLTSGLDDYPRP 580
                     *************98777788999***************************************************.......************* PP

                     SS--TT-B-HHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHTTEETTTTEE-EEEE-T.....................TTSS- CS
  Glyco_hydro_63 244 shpseaelhvDlrsWvalaakslksiaellgeeeekekyaktekelsenleklhwseeekayaDlgvhtekvklkkkevegqkkelvrvveeepe 338
                     ++p+  elhvDl+sW+++++ksl++ a++lg  +++++++ + +++s+nl++lhws+e k+y+D ++++                        +e
      KHJ34529.1 581 QPPHPGELHVDLLSWIGMMSKSLQKTASFLGYLDDRKEFEANLNAISHNLDDLHWSKELKCYCDATIDE-----------------------YEE 652
                     ******************************************************************966.......................678 PP

                     EEEE---BHHHHHHHHTT-S-TT-THHHHHHHHHH-TTTTEETTEEBSB-TTSTTTT-.....TT-SSSS-B-HHHHHHHHHHHHHH---SS-.- CS
  Glyco_hydro_63 339 lqlvealGYvslfPlllklldadsekleklldlikdpeelwsdyGlrslskksslygkrntehdenYWrgpiWininylilsalkhyskvegpyk 433
                     ++l++++GY+s+fP+l++ll+++s+kl  +ldl++dp+elws++G+rslsk+s++yg+     +enYWrgpiW+ninyl++s l +y++ +gp++
      KHJ34529.1 653 HTLICHKGYISIFPFLTGLLEPTSDKLGPILDLLSDPNELWSEFGIRSLSKNSEYYGT-----NENYWRGPIWLNINYLTISQLLRYAQSSGPEQ 742
                     899*******************************************************.....9******************************* PP

                     -HHHHHHHHHHHHHHHHHHHHHHHTSS--SEE-TTT--EESSSS-TTGGGGHHHHHH- CS
  Glyco_hydro_63 434 ekakeiykeLrsnlvnnivkqyketGfvweqYddktGkgkgakeFtGWtslvvlimae 491
                     ++a++iy +Lr nlv+ +++++ etGf weqY+ +tGkg+++k+FtGWtsl++ ima+
      KHJ34529.1 743 QRARKIYGQLRLNLVKTVYESWLETGFAWEQYNAETGKGQRTKHFTGWTSLTMKIMAM 800
                     ********************************************************85 PP

>> Glyco_hydro_63N  Glycosyl hydrolase family 63 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.9   0.0   5.1e-80   4.6e-76       3     227 .]      41     265 ..      39     265 .. 0.97
   2 ?   -2.4   0.1      0.47   4.2e+03      25      45 ..     767     787 ..     758     802 .. 0.66

  Alignments for each domain:
  == domain 1  score: 255.9 bits;  conditional E-value: 5.1e-80
  Glyco_hydro_63N   3 lWGpYrpnlYfGlrpRipkslltGLmWfkvddyasvqkklrhtceqgdglkkygWeeyDgrtgGkqtikDkennldlttsfvKvkdge.gGsWa 95 
                      lWG YrpnlYfG++pRip+s++ GLmW++v+dyasvq++lrhtceq+d++++ygW+e+D+r gG+q+i D++n++d+ ++fvK+++g  gGsW+
       KHJ34529.1  41 LWGSYRPNLYFGVKPRIPQSFIGGLMWARVEDYASVQDHLRHTCEQSDNIRGYGWDEFDARIGGVQNIYDEGNGIDISIKFVKIPGGGnGGSWT 134
                      8***********************************************************************************98887***** PP

  Glyco_hydro_63N  96 vrvkgkpredak.kaktsvvfYiglegegsleleee.dekglegdvkleGeskelgefkleitegpktnkhpesnhksekekplsktlvlslkv 187
                      +r++g+ r+d++ + k++v+fY++legegsl +++e d++g+++dv++ G s++l+++kl++++g  + +hp  +h++++ kpl++t+v s+++
       KHJ34529.1 135 ARIQGTLRKDSHsDMKSTVIFYAALEGEGSLVVDNEvDRLGFKDDVTIVGDSPQLNKYKLTVSRG--SGEHPFIEHEASRLKPLDRTFVSSITA 226
                      *********9998*********************77699*************************8..999*********9************** PP

  Glyco_hydro_63N 188 pdenvwkakdillselkesvqaliekygkekklpppaqvl 227
                      ++e +w+ k+++++e++e+v+ ++++yg+++ lpppaq++
       KHJ34529.1 227 SKEVIWESKTLVFKEIREQVDLYLKEYGNQN-LPPPAQMY 265
                      ******************************9.99999986 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.47
  Glyco_hydro_63N  25 tGLmWfkvddyasvqkklrht 45 
                      tG  W + +  ++ +++++h+
       KHJ34529.1 767 TGFAWEQYNAETGKGQRTKHF 787
                      555555555555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (819 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       602  (0.0335769); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.27s 00:00:00.95 Elapsed: 00:00:00.42
# Mc/sec: 5878.33
//
Query:       KHJ34530.1  [L=823]
Description: putative small oligopeptide opt family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.5e-179  596.7  53.0   6.3e-179  596.5  53.0    1.0  1  OPT       OPT oligopeptide transporter protein
  ------ inclusion threshold ------
      0.047   13.8   0.1       0.22   11.6   0.1    2.3  1  CcmD      Heme exporter protein D (CcmD)
       0.07   12.5   1.1       0.23   10.8   1.1    1.9  1  DUF4191   Domain of unknown function (DUF4191)


Domain annotation for each model (and alignments):
>> OPT  OPT oligopeptide transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  596.5  53.0  1.1e-182  6.3e-179       2     615 ..     124     779 ..     123     780 .. 0.97

  Alignments for each domain:
  == domain 1  score: 596.5 bits;  conditional E-value: 1.1e-182
         OPT   2 lTlRavvlGillgvlgsavnmyfglrtglvsissipaallafplgkalarilpk.........lslnpgpftikEnvliqtmasa..aatlalatgliv 89 
                 +T+Ra+++G+ l+++g+ +n +f+lr ++++i+++ ++l+afplg+ ++ i+p+         ++l+pg+f+ kE+++i+ ma+a  a++  +at++++
  KHJ34530.1 124 NTIRAWTIGLMLTTIGAGINCLFSLRNPSIAITTFAVQLIAFPLGRGWDLIMPDrqfrvgglkFNLSPGKFNFKEHAIIVCMANAgyAGSAIYATDVLI 222
                 7************************************************************************************66577779****** PP

         OPT  90 vipalelygqsagfgylillslsvqllGvgfagplRkflvypeklifPsglataellkalhkpegee........ksrlkfflivflgsfvwglfplyl 180
                  +  +  ygq++g++ ++l+++  q++G+g+ag++R++lv+p+ +i+Ps l+ ++l+ +lh+ +  +        ++r++ fl+v+ gsf+w+++p+++
  KHJ34530.1 223 SQSVF--YGQNFGWMFQLLFAITNQMIGYGLAGICRRWLVWPAAMIWPSDLVNCALMYTLHDRNSTTnpvangwrITRYRWFLYVVCGSFFWYFVPGWI 319
                 *****..*******************************************************998889******************************* PP

         OPT 181 fpalssfswltwiapknvvlanlf....glgllpltfdwnviaayiGsglivplwvavnmliGavlswgiliPll..yysngwypaylp.......... 263
                 f+ ls+f +++wiap+nvv+++lf    glgllplt+dw+vi+ y+ s+li p+ +++n+liG+v++  ++ P+l   y ++w+++ylp          
  KHJ34530.1 320 FQGLSYFTFVCWIAPQNVVVNQLFggltGLGLLPLTLDWTVITGYLASPLIPPWHAIMNTLIGVVVF--VIGPALglHYYGVWFSDYLPmqdshsydnt 416
                 ****************************************************************976..666666569999****************** PP

         OPT 264 ...ydvteildedgvldyekyigyglmllaalvallylvqfaaitllivhtilkhgkdikaalksarsprteeddrhrrlmrkykdvpmwwylallvls 359
                    y+v++ild+   +++++y++y+++++++ +al+y+++faai+++ivhtil+  k+i++++k a   r ++dd h r m+ky d p+wwyl+l+v +
  KHJ34530.1 417 aklYNVSRILDSAYRFNETAYKEYSPIFMSTNFALSYGISFAAISAVIVHTILYESKTIWQQYKLA---RNQQDDCHMRMMKKYSDAPDWWYLLLFVTM 512
                 *****************************************************************9...99**************************** PP

         OPT 360 lvigiivvealftqlpvwglllalllafllaivsaiiaGltglnpvsgigkltqlifgallpgrpvanlvfgavvyaaaaqagdfmqDLKtGhllkasP 458
                 l ++++v+ ++ t+  +w++++++++  +++i+++ii+++t++  ++g++++t++i+g+++pg+p+a+++f++++y+++ qa+ f+qDLK+Gh+lk++P
  KHJ34530.1 513 LSLSFVVILVWDTHFSWWAMIICTIIPCIFVIPMGIIYATTNI--QIGLNVITEFIIGYMTPGKPLAMMMFKSYGYIVMVQAQYFLQDLKLGHYLKLPP 609
                 *******************************************..****************************************************** PP

         OPT 459 raqfvaqliGtlvgavvniavlkllvkaygdictadasnaftaPqakvfaavavl..lvggk.........kglpwafllgavapfilllllkkfpkks 546
                 + +f+aq  +t++++vv+iav+++ + +++dictad+++++t+P  +vf++++++  ++g+          ++l+w+fl+ga++p+ +++  kk+p +s
  KHJ34530.1 610 KTLFSAQAAATIWSSVVQIAVMNWALGNIEDICTADQKSSYTCPGGNVFFTASIIwgAIGPArifasgaiySPLTWCFLVGAILPLFTYYGAKKYP-NS 707
                 ***********************************************************************99*********************99.99 PP

         OPT 547 tarklplplafavgfylppsl.....sialligglianlwlkrrdaewakkynyvlaaGLiaGealmgviiafl 615
                  +r+l +p++++ ++ +pp++     ++  +  g++++ +++ r+++w++ky y+++aGL++G+ l+++ii+f 
  KHJ34530.1 708 GFRYLSVPVMLGSLGSIPPATvysllCWGSV--GIVFQKYIRGRYNAWWSKYSYITSAGLDSGLILSTLIIFFT 779
                 9********************6655555444..999999999******************************95 PP

>> CcmD  Heme exporter protein D (CcmD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   3.8e-05      0.22       9      31 ..     451     473 ..     450     486 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 3.8e-05
        CcmD   9 lsYgitllvlagLilwslrdrrr 31 
                 lsYgi+++++ ++i+++++   +
  KHJ34530.1 451 LSYGISFAAISAVIVHTILYESK 473
                 8****************986655 PP

>> DUF4191  Domain of unknown function (DUF4191)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   1.1   3.8e-05      0.23      16      62 ..     492     541 ..     472     556 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 3.8e-05
     DUF4191  16 kltrkedkkllwlllaaflvvvvvfvvlglllg...slilllilgillgl 62 
                 ++ +k   +  w+ l++f+ ++ + +v+ l++    s++ ++i  i+  +
  KHJ34530.1 492 RMMKKYSDAPDWWYLLLFVTMLSLSFVVILVWDthfSWWAMIICTIIPCI 541
                 78899999999********************9434468888888877443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (823 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       868  (0.0484132); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.43
# Mc/sec: 5794.79
//
Query:       KHJ34531.1  [L=344]
Description: putative killer toxin sensitivity protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-85  286.8   0.1    2.4e-85  286.6   0.1    1.0  1  Elong_Iki1  Elongator subunit Iki1


Domain annotation for each model (and alignments):
>> Elong_Iki1  Elongator subunit Iki1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  286.6   0.1   1.4e-89   2.4e-85       1     297 [.      19     327 ..      19     328 .. 0.91

  Alignments for each domain:
  == domain 1  score: 286.6 bits;  conditional E-value: 1.4e-89
  Elong_Iki1   1 LlsklLslrdsaSpLtLvlDsleqsakplleelirrakssktkvifvsfetlkk.....pkgvdvfieaterskklkelakeiksalspkssek.k..k 91 
                 L++klL+l  ++Sp+tL+l +leqs++ l++e+ rrak+s+tkv+fvsf+t        p +++ fi+a  r+k++ +l++ei s+l+ +++++ +   
  KHJ34531.1  19 LFQKLLNLSAGVSPFTLILETLEQSGNSLIQEFGRRAKISNTKVVFVSFKTPYCkkahlPIEISSFINA--RQKTICTLREEIISHLNLPKRNSvDekC 115
                 89************************************************75554588899********..9999************977777654667 PP

  Elong_Iki1  92 kalviiDslnplaslikeeslaaflssllsspsvslvavYHtdv.......eyapspltlLkylAttiltveslshelarkaardrsleepefgleegl 183
                 + ++++Dsl plas+ ++e+l++fl+sll s+svsl+avYH d+       +y+p pl +L+ylAt+iltv+sl+++l rk+ardrsl+ep fglee +
  KHJ34531.1 116 NFMLFFDSLVPLASS-HSEELSSFLTSLLISSSVSLLAVYHVDIpipcsitPYSPGPLVILTYLATAILTVSSLEQVLSRKRARDRSLPEPLFGLEEVK 213
                 889*********975.899**********99******************************************************************** PP

  Elong_Iki1 184 egvlvg.......egvvlelelRRkSGRavsekfvldsasheyeavkekeeeeeeaekevllledhpltakpeeeeeseapesTFnLgltekqrrdreg 275
                 egv++g       +g+v+++elR++SGR++ e+fvl ++s++++  k  + +e+    + ++    p + ++e++++s++ + TFnL+l+ekq+++r++
  KHJ34531.1 214 EGVIIGrndsvkeKGLVVQMELRKRSGRGILENFVLIPSSSSKAIPKIIPLTEY----PAYI--STPTFINTENQDHSSQLDMTFNLSLSEKQKKERDE 306
                 ***********9779***********************9988887642222333....3344..5788888888888999999**************** PP

  Elong_Iki1 276 vvLPyfdAQkelgageGGrIlY 297
                 vvLPyfdAQke g +eGGrIlY
  KHJ34531.1 307 VVLPYFDAQKEGG-NEGGRILY 327
                 *********7777.******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (344 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       407  (0.0227007); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2602.69
//
Query:       KHJ34532.1  [L=543]
Description: hypothetical protein EV44_g3797 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (543 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1198  (0.0668191); expected 358.6 (0.02)
Passed bias filter:                      196  (0.010932); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3951.41
//
Query:       KHJ34533.1  [L=175]
Description: hypothetical protein EV44_g0695 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.024   14.2   0.5      0.029   13.9   0.5    1.2  1  FAM47            FAM47 family
       0.16   12.6   3.3       0.14   12.7   1.3    2.0  2  FoP_duplication  C-terminal duplication domain of Friend of P


Domain annotation for each model (and alignments):
>> FAM47  FAM47 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.5   3.2e-06     0.029      67     124 ..      64     120 ..      16     134 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.2e-06
       FAM47  67 grdefllpkissrgayadpksrkkkllkeaalfsklsparlarkvsleevedqltaec 124
                 g +ef   k  +r+     +s++ k +k+a l ++   a++++k+s e++e ql  + 
  KHJ34533.1  64 GSNEFPKFKEINRNNNDPSNSKNNKKVKRANL-NRAIKAQISKKISREQLEHQLSKKK 120
                 668999999999999888899********965.66778****************9876 PP

>> FoP_duplication  C-terminal duplication domain of Friend of PRMT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.1      0.27   2.4e+03      18      18 ..      42      42 ..      10      74 .. 0.59
   2 ?   12.7   1.3   1.6e-05      0.14      13      57 ..      73     117 ..      55     121 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.27
  FoP_duplication 18 r 18
                     +
       KHJ34533.1 42 T 42
                     2 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 1.6e-05
  FoP_duplication  13 grggrrgrgrggrggrggrgrgrggrggrkkkkpltkeeLDaeLD 57 
                        +++++ + +++++++ ++++ ++  +++ +k++++e+L+ +L+
       KHJ34533.1  73 EINRNNNDPSNSKNNKKVKRANLNRAIKAQISKKISREQLEHQLS 117
                      5678888899999999999999999999***************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2370  (0.132188); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 1344.50
//
Query:       KHJ34534.1  [L=811]
Description: putative tpr-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-65  219.7  16.2    1.3e-64  218.4   8.1    4.1  4  SPO22     Meiosis protein SPO22/ZIP4 like
  ------ inclusion threshold ------
        1.9    8.9   7.4       0.47   10.8   0.2    3.6  4  TPR_12    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> SPO22  Meiosis protein SPO22/ZIP4 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0     0.054   4.9e+02     166     210 ..       6      59 ..       2      62 .. 0.70
   2 !  218.4   8.1   1.4e-68   1.3e-64       2     276 .]      64     336 ..      63     336 .. 0.98
   3 ?    0.3   0.0     0.045     4e+02       2      36 ..     392     423 ..     391     432 .. 0.72
   4 ?    1.9   0.3     0.015   1.3e+02       8      67 ..     724     788 ..     697     808 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.054
       SPO22 166 slikrla.eksaalavrvldylld........rklsfersedvvekllvalffl 210
                 + +k+++ +k++++a+++l ++          ++  ++ ++d+++kll  +  l
  KHJ34534.1   6 KAAKTCMeHKRSNMALKALGKVSGyqeliktsGEEVTKDDQDICDKLLAEYYIL 59 
                 5689999999*********99999884444442222344444888888766655 PP

  == domain 2  score: 218.4 bits;  conditional E-value: 1.4e-68
       SPO22   2 AwkegdldlAehmlskakceenllrldpeeaeeLarllyniGksllskkkyeeavkWLqraldilekqesesksssdlselrlsvlrllarayleldqe 100
                 Aw++++ld+Aehm+ k  +++  ++ld+ ++e+La++l+++Gk+ll+kk+y+ ++kW qra+d+++  +++++s  d+selr+s+++ l++a++ l+++
  KHJ34534.1  64 AWHMEQLDIAEHMYHK--STSHEKKLDAATTESLADVLFEMGKELLNKKQYKLSIKWSQRAFDVINGWQLDELSN-DASELRISIMQVLIKALICLEDD 159
                 9***************..67999***************************************************9.*********************** PP

       SPO22 101 esyekalkavellqkeygkkehpsllllklkill...kreadeeeieealeemidsvelseanfklilslikrlaeksaalavrvldylldrklsfers 196
                 +s+ +a+k++++l+ e+g  ++ ++lll l+il+    +++d++++++++ ++++ v l+e nf+l++ +i++l +ks++la+ ++++ll++ + + + 
  KHJ34534.1 160 DSLAEAQKLLDILEREVG--DKLVVLLLHLEILSapnCKKFDSSAYSDVIIRIMRVVYLTEPNFNLLMFHIRKLNDKSPSLACCTIEELLSKRILVDGL 256
                 ******************..**************99999****************************************************77888999 PP

       SPO22 197 edvvekllvalfflltqskkeedaiealedilaalehslgkqlskeaasalhtLLWnkgekhykaknydeAaewyelslh 276
                 +++ve++lv++++++  + ++ d  + l +il+++  ++++++s++a+ a++tL+W+k+e++y + +y++A +w+el+ h
  KHJ34534.1 257 SEFVERILVTRVWMEVGHGDDDDRTQYLDTILSKILANIKNPISPQATLAAQTLIWKKIESNYATAQYEKAKRWCELAKH 336
                 99***************999999******************************************************965 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.045
       SPO22   2 AwkegdldlAehmlskakceenllrldpeeaeeLa 36 
                 A++ gd d+A+ +l k+    + +  dp+ +  ++
  KHJ34534.1 392 AVRSGDDDMAVECLHKIS---SATVNDPSLLYACC 423
                 99**************76...55555566665555 PP

  == domain 4  score: 1.9 bits;  conditional E-value: 0.015
       SPO22   8 ldlAehmlskak..ce...enllrldpeeaeeLarllyniGksllskkkyeeavkWLqraldile 67 
                  +lAe +l++++  +e   e+ ++ ++ee+e +a   +n +++l+ + + +  + W +++l+i +
  KHJ34534.1 724 AELAEELLNQVQihAEealETDQKYPTEELEWIAIRAFNHAVDLYCCHDDDRFINWSSKSLNIAQ 788
                 45566666655522221112334556668888999999999999988888999999999988876 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   5.3e-05      0.47      11      73 ..      62     124 ..      53     127 .. 0.94
   2 ?   -1.6   0.0      0.37   3.3e+03      20      39 ..     159     178 ..     144     187 .. 0.74
   3 ?   -3.8   0.1       1.8   1.6e+04      15      27 ..     320     332 ..     315     334 .. 0.60
   4 ?   -0.5   0.1      0.17   1.5e+03      25      37 ..     737     749 ..     720     772 .. 0.57

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 5.3e-05
      TPR_12  11 avlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlelleeala 73 
                 av ++++++d A+ +++k+    ++l   + + +a +l+ +g  ++  ++y+  +++ ++a +
  KHJ34534.1  62 AVAWHMEQLDIAEHMYHKSTSHEKKLDAATTESLADVLFEMGKELLNKKQYKLSIKWSQRAFD 124
                 6889*****************************************9999***********987 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.37
      TPR_12  20 deAlellekaleiarrllGp 39 
                 d++l+  +k l+i +r  G+
  KHJ34534.1 159 DDSLAEAQKLLDILEREVGD 178
                 68888889999999777664 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 1.8
      TPR_12  15 rlgrydeAlelle 27 
                 +  +y++A +++e
  KHJ34534.1 320 ATAQYEKAKRWCE 332
                 4456666666555 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.17
      TPR_12  25 llekaleiarrll 37 
                 + e+ale  ++++
  KHJ34534.1 737 HAEEALETDQKYP 749
                 4455555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (811 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       784  (0.043728); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.40
# Mc/sec: 6115.86
//
Query:       KHJ34535.1  [L=751]
Description: putative exocyst complex component sec6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.1e-167  557.4  13.2   4.8e-167  556.8  13.2    1.3  1  Sec6      Exocyst complex component Sec6
  ------ inclusion threshold ------
      0.015   15.4   5.4        1.1    9.3   0.2    3.2  3  NKWYS     Putative capsular polysaccharide synthesis protein


Domain annotation for each model (and alignments):
>> Sec6  Exocyst complex component Sec6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  556.8  13.2  5.4e-171  4.8e-167       5     574 .]     179     750 ..     175     750 .. 0.97

  Alignments for each domain:
  == domain 1  score: 556.8 bits;  conditional E-value: 5.4e-171
                 HHHHHHHHHHHHHHHHSTTSSSCHHHH....HHHHHHHHHHHHHCCCCS.----TT--...............-----HHHHHHHHHHHHHHHHCTS-- CS
        Sec6   5 dkliekFdkllweiirslielvregntslvvrlvkiverEekeDeklealreltkkekdeedaanfr.....arrprnykkkflealeesveerfeeck 98 
                 d++ie+Fd+++++i+ ++i++   gnts++vr + ive+Ee++D++++a++e+ k++k  e+a++f+     ar+ ++yk+kfl a++ ++ e++ ++k
  KHJ34535.1 179 DEVIEWFDEHIGMIALDIINVLINGNTSMIVRFAVIVEAEERSDKRIKAMQEALKDHK--EMASRFQsitdgARTIKGYKEKFLLAIRLHADEQMSATK 275
                 89******************************************************99..899************************************ PP

                 S---TT--HHHHH...HHHHHHHHHHHHCCCCCS-TTT-HHHHHHHHHHHHHHHHHHHHTTS-.--HHHHHHHHHHHHHHHH.HTTTSSHHHC.CCC-- CS
        Sec6  99 ekfseddkklellenldwlledLevVkdelaplfPpswkifktyvkiYhnklhdllqelvsse.leaedilailewvkkYskklsklnpelefkkkelk 196
                 e f +d+  le  ++l+w+++dL+++k++++pl+P++wkif+tyv+iYh+ +hd+l+ +v+++ ++++++l+il+w +kY+ k+++    l+f+k +l+
  KHJ34535.1 276 ELFLQDPGRLE--KSLKWFFNDLNAIKQGMVPLMPKKWKIFQTYVEIYHKTMHDFLIGMVDDPeTSSANTLSILNWPEKYYAKMAR----LGFNKPDLR 368
                 ******98888..9************************************************************************....99******* PP

                 -SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT---.....EESSSEE-CHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH CS
        Sec6 197 pllldekkeeLledYlklivkkmkeWldnllktEvkkftereepp...eededglyvlplpvdvfqmlaeqvdvaaeskqakilvgvleelsellksrq 292
                 p++lde+++eL++d+ +li + +++Wld+++ktE+k+f++r+ +     +de g++++++ vd+++mlaeq+++a +sk+ ++l+gv+++++  l++ q
  KHJ34535.1 369 PHVLDERENELVKDFQQLIIRFLDQWLDRIFKTEQKDFMDRNIDGgnlNTDEYGYFRTKNLVDMWRMLAEQIEAAENSKRVDVLEGVIDAMILRLQTHQ 467
                 *************************************************************************************************** PP

                 HHHHHHHHC-TTSTT.............HHHHHHHHHHHHHHHHH............HHHHHC.........---HHHHHHHHHHHHHHHHHHHHHHCH CS
        Sec6 293 dawqelleeelkkymsvknnereeskpglveyliAlaNdqlkcad.........yaeslsskylelvsskyeeriteefeelldgfvdlskeaisalle 382
                 ++wq++l+ee++ky   ++  ++e+ + l+++l+A+aNdq++c+d         y++ +++++++lv++ y er++++++ l+dg+vdls++++  +++
  KHJ34535.1 468 RNWQKMLDEEASKYLGSNP--ESEGFQALQDWLVATANDQIACIDdneeeerfaYVTVFRQQFEPLVTPLYLERVEDKLNILRDGYVDLSTHCVAKFAQ 564
                 **************88888..6779************************************************************************** PP

                 HHHC.CTTCCCCHHHHTTTSSHHHHHHHHHHHHTTTTGGGS.S-HHHHHHHHHHHHHHHHHHHHHHHCSS----SHHHHHHHHHHHHHHHHHHHHHHHH CS
        Sec6 383 iifn.DLkpalsklftkkWytgelmeqivetiedYlndykeylspelfevlleelldelvveYlralrkkklkfaakkqkkfaekikrDaeklydffek 480
                 +if  D+k++l ++ft+kWy  ++m+qiv+t+e+Y++dyk +l+++l+++++eel+del+++Yl+++r+k++kf  k+q+ f++ki +D++ +++ff+ 
  KHJ34535.1 565 LIFSvDFKTVLPDFFTPKWYMANAMKQIVVTFEEYIGDYKAVLHYSLIDIFIEELADELLIRYLSSVRNKGAKF--KRQDPFKDKIFSDVSVAFEFFNS 661
                 **************************************************************************..*********************75 PP

                 .TT-..---CCCCTTHHHH...HHHH--SHHHHHHHHHHHHHS-TT--HHHHHHHHHCCSS-STCHHHHHHHHTT---SS----....-SSCCCS CS
        Sec6 481 .lgseedaaylkqklraielllelleledpdavplevetllesypdisedhveavlkaRkDldksevkelveqlkeikkevesavepprtifsrv 574
                  l+s + ++++kqk+r+ e +l+lle e+ +++p+ ++++++ y+d++ ++veavl++R+D+d+  ++++++++++i  +v+++    +t++s+v
  KHJ34535.1 662 gLLSPDVTDVIKQKWRVTENFLALLEMEK-SSIPDLFASFKTDYWDLQFSWVEAVLRSRDDFDRGLLNAVKAKAAQI--SVARGT---ETLMSKV 750
                 16669**************999*******.**********************************************9..556666...4888875 PP

>> NKWYS  Putative capsular polysaccharide synthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.2   0.00013       1.1      72     126 ..      71     126 ..      46     129 .. 0.77
   2 ?    6.9   0.4   0.00069       6.2      18      82 ..     165     225 ..     151     239 .. 0.67
   3 ?   -3.0   0.0      0.84   7.5e+03      33      42 ..     288     297 ..     246     302 .. 0.56

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00013
       NKWYS  72 liksekldel.dkeikdfLnidnvklkksneaknKwYseiysefkdkydfskelle 126
                 +i+++kl    ++ i+df ni+ v+l ++n    +   +  + f d+++f +++l 
  KHJ34535.1  71 MIRVDKLCAEaQNMIRDFPNINLVSLTHKNFVAVQKMRNDLQTFNDRLEFVEKMLR 126
                 4677777665599*****************98877778888999999999887765 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.00069
       NKWYS  18 qlLeeiFeky.inknlpaeWFDnElkknlgiDvfnkdfdkdegfvifnnkkfsllliksekldeld 82 
                 + L++  e+y i+++  +eWFD  +  ++++D++n  ++ +  + +    +f +++   e+ d+  
  KHJ34535.1 165 KSLQNTLEDYfIKQDEVIEWFDEHIG-MIALDIINVLINGNTSMIV----RFAVIVEAEERSDKRI 225
                 345555555425667789****9986.789*****99998877654....5666665555555555 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 0.84
       NKWYS  33 paeWFDnElk 42 
                  ++WF n+l+
  KHJ34535.1 288 SLKWFFNDLN 297
                 3356655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (751 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       923  (0.0514808); expected 358.6 (0.02)
Passed bias filter:                      515  (0.0287244); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.42
# Mc/sec: 5326.10
//
Query:       KHJ34536.1  [L=438]
Description: putative zn 2cys6 transcription factor acum [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       686  (0.038262); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 3484.70
//
Query:       KHJ34537.1  [L=635]
Description: putative alpha beta-hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-38  133.0   0.0    4.1e-29  101.9   0.0    2.3  2  Abhydrolase_3  alpha/beta hydrolase fold
    3.4e-17   62.4   0.1    1.2e-16   60.5   0.0    1.9  2  Say1_Mug180    Steryl acetyl hydrolase


Domain annotation for each model (and alignments):
>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.9   0.0   4.6e-33   4.1e-29       1     120 [.     147     260 ..     147     271 .. 0.94
   2 !   28.7   0.0   1.2e-10   1.1e-06     139     191 ..     364     416 ..     325     420 .. 0.83

  Alignments for each domain:
  == domain 1  score: 101.9 bits;  conditional E-value: 4.6e-33
                    EEEE--STTTS--TTTTHHHHHHHHHHHTSEEEEEE---TTTS-TTHHHHHHHHHHHHHHHTHHHHTETTCEEEEEEETHHHHHHHHHHHHHHHTT CS
  Abhydrolase_3   1 lvyfHGGGfvlgsldthdalcrelakelgavvvsvdYrlAPehpfPaavedalaalrwlaeqawelgadpsrivlaGdSaGGnlaaavalrardeg 96 
                    l+y+HGG++ ++s+  h+  ++++a+ l+a+v+++ YrlAP+ pfP  ++d+laa+ +l +       dp+ ivlaGdSaGG + + +++++rd++
     KHJ34537.1 147 LFYVHGGAYFFCSVGIHRFQMQKYAHLLKARVFAPSYRLAPQFPFPCGLHDCLAAYMYLITI-----QDPTTIVLAGDSAGGGMILSILVMLRDQN 237
                    68***********************************************************9.....6**************************** PP

                    ---EEEEEEESE-SSTSSTTSHHH CS
  Abhydrolase_3  97 epkvagqvliyPvtdlertesesi 120
                     p +ag +li+P++dl +++ +s 
     KHJ34537.1 238 LPLPAGAILISPWVDL-THSFPSV 260
                    **************99.6666666 PP

  == domain 2  score: 28.7 bits;  conditional E-value: 1.2e-10
                    HHHHHHSSGGGGGSTTTSGGGCS-SST---EEEEEETT-TTHHHHHHHHHHHH CS
  Abhydrolase_3 139 lfwrlylpeadrddplaspllaedlsglpptlvvvaefDplrdegeayaerlr 191
                      ++ly+p+  +++pl+sp+++++l+glpp ++++++ +plrde++ +a++ +
     KHJ34537.1 364 DQIQLYAPNLLLSNPLVSPIFQPSLAGLPPLFILTGGGEPLRDEQIYLAHKAA 416
                    45789999****************************************99865 PP

>> Say1_Mug180  Steryl acetyl hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.5   0.0   1.4e-20   1.2e-16     109     239 ..     133     255 ..     120     264 .. 0.83
   2 ?   -2.3   0.1      0.17   1.5e+03     349     366 ..     579     596 ..     569     598 .. 0.87

  Alignments for each domain:
  == domain 1  score: 60.5 bits;  conditional E-value: 1.4e-20
  Say1_Mug180 109 wlrkv.petfdPkvDpvllylHGGgfalklipvtlvfLsnlrklfpdmailvsDYtvtaakdqskkYplqvleslavydylvkskgfknvvvlGdSaG 205
                  +++++ ++    + D+vl y+HGG + +  + +    ++     + +  +  + Y +      +  +p  + ++la y yl+  +  + +v+ GdSaG
   KHJ34537.1 133 YRQRItGQ---SHGDRVLFYVHGGAYFFCSVGIHRFQMQKYA-HLLKARVFAPSYRLAP----QFPFPCGLHDCLAAYMYLITIQDPTTIVLAGDSAG 222
                  44444233...478************9987776655544444.3446789999**9988....789******************************** PP

  Say1_Mug180 206 GnlvLslllklsklnkvvlPkkaiaiSPWlnlti 239
                  G ++Ls+l+ l++ n   lP +ai+iSPW++lt 
   KHJ34537.1 223 GGMILSILVMLRDQNL-PLPAGAILISPWVDLTH 255
                  *************766.89************994 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.17
  Say1_Mug180 349 igPilkyssnldkWskll 366
                   gP+lk+++  ++W k++
   KHJ34537.1 579 AGPVLKWMETKQNWDKKF 596
                  58************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (635 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       690  (0.0384851); expected 358.6 (0.02)
Passed bias filter:                      583  (0.0325172); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.63u 0.28s 00:00:00.91 Elapsed: 00:00:00.42
# Mc/sec: 4527.74
//
Query:       KHJ34538.1  [L=398]
Description: putative secreted effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1185  (0.066094); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2829.22
//
Query:       KHJ34539.1  [L=740]
Description: putative hsp70-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-11   43.0   0.4    5.3e-10   38.1   0.2    2.1  2  HSP70     Hsp70 protein
  ------ inclusion threshold ------
      0.015   14.2   0.1       0.19   10.5   0.0    2.1  2  MreB_Mbl  MreB/Mbl protein


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.8   0.0     0.003        27       1      47 [.     177     232 ..     177     235 .. 0.63
   2 !   38.1   0.2     6e-14   5.3e-10     114     365 ..     287     566 ..     281     586 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.003
                 EEEEEEXSSEEEEEEE....ETTEEEEEXX.....TTSXSSEESEEEEXTTSEEET CS
       HSP70   1 viGiDLGttnsvvavm....eggkievian.....eegnrttPsvvaFtkkerlvG 47 
                 ++GiD Gtt s va +     + k ++i++     ++ ++  P v+ +++ +++vG
  KHJ34539.1 177 IVGIDFGTTFSGVAFAfatnTEAKEDIITEwpgagSYTKQKIPTVLYYDQYQKVVG 232
                 69*********998761111334456776522222445566777777777777776 PP

  == domain 2  score: 38.1 bits;  conditional E-value: 6e-14
                 HHHHHHHHHHHHHHHHTSBEEEE..........EEEEXTTXXHHHHHHHHHHHHHTTX......EEEEEEEHHHHHHH...HHHTCCSSSCEEEEEEEE CS
       HSP70 114 samvLkklketaeaylgkkvtda..........vitvPaYfndaqRqatkdAgkiAGL......nvlRivNepTAaal...aYGldkkdkernvlvyDl 193
                 +a  L kl++   ++l+k++ ++           +tvPa +nda + at+ A+  AG+      n l ++ ep Aaal     Gl + + +  vl++D 
  KHJ34539.1 287 AADYLFKLRQAMRSQLQKTLGEVfnreernikyYLTVPAIWNDAGKAATRAAAIQAGFlrdendNRLTLITEPEAAALfcsKAGLLNLKVHDAVLIVDC 385
                 55556666665555555553332111111111169**********************988887777889*********444369999999********* PP

                 XSSXEEEEEEEEETT.EEEEE.EEEEET.TXSHHHHHHHHHHHHHHHHHHHHSXXGGGSH.HHHHH.HHHHHHHHHHHTTTSSCS.EEEEEEEE.EETT CS
       HSP70 194 GggtfdvSilelekG.vfevk.aTagDt.hlGGedfDealvehlveefkkkegidlskdk.kalqr.lkeaaekaKkeLSsskqt.einleiet.vded 285
                 Gggt d    e+e+   f v   Tag     G     ++  + l+++++k +  d sk   +++ + + +  +++K ++ +++q+  +++ ie+ + e+
  KHJ34539.1 386 GGGTVDLIAYEVEEEsPFTVSeCTAGSGdSCGSTALNRNFSNILRTKIRKMKLPDGSKTAgRVYAKcIMDFENRIKADFRNNNQKwAVDVGIEAeFPEA 484
                 ************964367774245554414677899999**********9999998876425555526667779****998765435677777624455 PP

                 T.EEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTT.CHHBSSSHTTTHHH CS
       HSP70 286 g.kdlseklsRakfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfg.kepsktvnpDeava 365
                 g ++  ++++ +++ +  e++++r+le v++ +   + ++  +++v++vGG      + +++k  +  +  sk v p + va
  KHJ34539.1 485 GiEEGYMTFTNEEILQCFEPVVNRILELVRNQIIAIQAQNRVLQNVLVVGGFGASEYLFQQIKLHVPpQFQSKVVRPMDSVA 566
                 789999*********************************************8776666666665555444555555555554 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   2.1e-05      0.19      90     159 ..     313     392 ..     286     398 .. 0.74
   2 ?    1.2   0.1     0.015   1.3e+02     236     316 ..     492     573 ..     483     582 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 2.1e-05
                 -SS--EEEEEE-SS--HHHHHHHHHHHHHTT......-SEEEEEEHHHHHHHHTT....--TTSSS-EEEEEE-SS-EEE CS
    MreB_Mbl  90 slskprvvicvPsgiteverrAvkeaakkaG......arevllieeplaAAiGag....lpveepsgnmvvdiGggttev 159
                   ++ +  ++vP   ++  + A + aa +aG       ++ +li ep aAA+ +     l+++   + ++vd+Gggt ++
  KHJ34539.1 313 EERNIKYYLTVPAIWNDAGKAATRAAAIQAGflrdenDNRLTLITEPEAAALFCSkaglLNLKVHDAVLIVDCGGGTVDL 392
                 445666778888888888888888888888844444347899*********9754333579999*************985 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.015
                 EEEHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHHH-EEEESGGG...GSBTHHHHHHHHHSS-EEE-SSTTTHHHHHHH CS
    MreB_Mbl 236 evsseevrealkepvsaiveavkevLektppeLaadivdrgivltGGga...llkgldkllseetglpvkvaedpltcvakGtg 316
                 + ++ee+ ++ + +v++i+e v++ + ++ +     ++++ +v+ G ga   l+++++  +  +++ +v    d++ +++kG+ 
  KHJ34539.1 492 TFTNEEILQCFEPVVNRILELVRNQIIAIQA--QNRVLQNVLVVGGFGAseyLFQQIKLHVPPQFQSKVVRPMDSVAAIVKGAV 573
                 67899******************99887766..467888877777656645567888888888888888888888888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (740 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.42
# Mc/sec: 5298.27
//
Query:       KHJ34540.1  [L=288]
Description: putative thaumatin family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.2e-62  208.8   1.2    8.6e-62  208.6   1.2    1.1  1  Thaumatin       Thaumatin family
  ------ inclusion threshold ------
      0.073   12.3   0.2          2    7.6   0.0    2.2  3  Glyco_hydro_64  Beta-1,3-glucanase


Domain annotation for each model (and alignments):
>> Thaumatin  Thaumatin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  208.6   1.2   9.6e-66   8.6e-62      10     214 .]       3     269 ..       1     269 [. 0.92

  Alignments for each domain:
  == domain 1  score: 208.6 bits;  conditional E-value: 9.6e-66
                 E.EETTT......EEEEE-TT-EEEEE--.-.SEEEEEEECEEE-TTSE..............ECCS--TTBSS-SS-.--SS--EEEEEECECCC..E CS
   Thaumatin  10 ailtnagsealektgfelepgesrtlsvpakwsgriwgRtgCsfdssgs..............CatGdcggkleCkgaggappatlaeftleekkekkq 94 
                 ailt+ag+++   +gfel+pg++++++v+a+w+griwgRt+Csf+++g+              C +Gdcgg l+C ++ g++p+tl+ef+l++  +++q
  KHJ34540.1   3 AILTQAGTGPGI-GGFELAPGKTVNFTVSADWQGRIWGRTNCSFNTAGNgasnlngnngagaaCISGDCGGVLNCVTS-GETPVTLVEFDLAGGVDGQQ 99 
                 789999976555.9*******************************666555789999******************876.556**************9** PP

                 EEEEEE-TT-BSS-EEEE..E-S...................................----EE-S-CCCC--GGGE...................... CS
   Thaumatin  95 dfYdvslvdGynlpvsit..pae...................................ckvaecaadlnkaCpaelkv..............krkdseg 142
                  fYd+slvdGynlp+ +   p e                                    ++++++a++ ++Cp++l+               +++ ++ 
  KHJ34540.1 100 VFYDISLVDGYNLPMGVYfiPGEnpklqkipprltncacigtpgylaplgaenaasipYESKQTNASVAEWCPWDLQQtlprkpvdgvyiypDSSIQRP 198
                 *****************98843367899****************************8777788**************779**********996666678 PP

                 ETTEE--HHHHH--HHHH-SCGGG...G----HHHHHHHHH-TTSBSSTT-HCCC-EEE.ETT--EEEEE-- CS
   Thaumatin 143 kvvaCksaCeafnsdeyCCtgeyatpetCkpteysklfkkaCpdaysYayddasstftcskkkadytvtfcp 214
                  + +C saC+++ns+++CCtg y++p++Ck   y++++k+ CpdaysYaydd+sstf +  ++ ++ v  cp
  KHJ34540.1 199 LFDPCFSACSKTNSPQDCCTGVYNSPSACKAPLYASMAKAICPDAYSYAYDDQSSTFII-PSGGGWGVRICP 269
                 99*********************************************************.6789*****998 PP

>> Glyco_hydro_64  Beta-1,3-glucanase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0      0.61   5.4e+03      68      86 ..      21      38 ..      18      60 .. 0.68
   2 ?    7.6   0.0   0.00023         2     124     154 ..      85     119 ..      76     135 .. 0.81
   3 ?    2.5   0.1     0.008        72     336     350 ..     238     252 ..     205     260 .. 0.70

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 0.61
                    ....SEEEE-SE.EEEEEE CS
  Glyco_hydro_64 68 pgstktvtiPkqiasgRiy 86
                    pg+t ++t+      gRi+
      KHJ34540.1 21 PGKTVNFTVSAD-WQGRIW 38
                    677777777755.667777 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00023
                     EEEEEEE.....TTEEEEE---SSEE-S-EEEEEE CS
  Glyco_hydro_64 124 dfaEfty....nsaglfaNisyVDfvslplglelt 154
                      ++Ef++    + +++f +is VD ++lp+g+   
      KHJ34540.1  85 TLVEFDLaggvDGQQVFYDISLVDGYNLPMGVYFI 119
                     578898877768999***************98765 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.008
                     BGGG----STTTTGG CS
  Glyco_hydro_64 336 svdgkgYaFaYDDvn 350
                     ++   +Y +aYDD +
      KHJ34540.1 238 AICPDAYSYAYDDQS 252
                     455779*******87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       359  (0.0200234); expected 358.6 (0.02)
Passed bias filter:                      202  (0.0112667); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 2239.66
//
Query:       KHJ34541.1  [L=196]
Description: putative ankyrin repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-07   31.2   0.0    8.2e-07   29.5   0.0    2.0  1  Ank_2     Ankyrin repeats (3 copies)
    9.6e-07   28.7   0.1      0.072   13.7   0.0    4.0  3  Ank_3     Ankyrin repeat
    2.9e-06   27.5   0.0      0.017   15.6   0.0    3.0  3  Ank       Ankyrin repeat
    6.3e-06   26.6   0.0    0.00019   21.9   0.0    2.9  3  Ank_4     Ankyrin repeats (many copies)
      7e-05   23.0   0.1       0.49   10.8   0.0    3.7  4  Ank_5     Ankyrin repeats (many copies)
  ------ inclusion threshold ------
      0.013   15.3   1.0      0.024   14.5   0.1    1.8  2  DUF720    Protein of unknown function (DUF720)
       0.04   14.4   0.0       0.11   13.0   0.0    1.7  2  TFIIS_M   Transcription factor S-II (TFIIS), central domain


Domain annotation for each model (and alignments):
>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.0   3.2e-10   8.2e-07       3      80 ..      25     136 ..      22     139 .. 0.63

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 3.2e-10
       Ank_2   3 lAakngnlelvklLl...egadpn......k.....ngktaLhyAakngnleivklLleh........adndgrtpLhyAars.g.............h 65 
                  Aa+ +n++l++ ++   +  ++       +      g+ + h Aa +gn ei+ +Ll++         + +g tpLh A+r+ +              
  KHJ34541.1  25 AAARGNNTDLLEKIIasfS--NAQevaqllNntitpIGNYVYHEAALRGNYEIIDILLDQegfecdpiSRMEGDTPLHSAVRFiNslpnsnksevenfA 121
                 4555566788888885431..221222222134556889*******************97786755544488*********997434444455544443 PP

       Ank_2  66 leivklLlekgadin 80 
                  e++ +++e+g+d+ 
  KHJ34541.1 122 RELISMMIESGSDPR 136
                 355555555566655 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.41     1e+03       9      23 ..      26      40 ..      23      46 .. 0.76
   2 !   13.7   0.0   2.8e-05     0.072       2      26 ..      60      84 ..      60      88 .. 0.87
   3 !    8.5   0.0    0.0014       3.6       1      15 [.      94     108 ..      94     137 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.41
       Ank_3  9 AarsgnleivkfLle 23
                Aar +n+++++ ++ 
  KHJ34541.1 26 AARGNNTDLLEKIIA 40
                788888889999887 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 2.8e-05
       Ank_3  2 GetpLhlAarsgnleivkfLlenkg 26
                G++  h+Aa+ gn+ei++ Ll++ g
  KHJ34541.1 60 GNYVYHEAALRGNYEIIDILLDQEG 84
                78999****************9655 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.0014
       Ank_3   1 nGetpLhlAarsgnl 15 
                 +G tpLh A+r++n 
  KHJ34541.1  94 EGDTPLHSAVRFINS 108
                 599********9987 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.6   4.1e+03       9      19 ..      26      36 ..      23      53 .. 0.50
   2 !    8.5   0.0    0.0011       2.9       2      27 ..      60      89 ..      59      92 .. 0.82
   3 !   15.6   0.0   6.5e-06     0.017       2      31 ..      95     139 ..      94     140 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.6
                HHHHTTHHHHH CS
         Ank  9 Aatngkkriik 19
                Aa++++++ ++
  KHJ34541.1 26 AARGNNTDLLE 36
                55555533333 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0011
                SBBHHHHHHHHTTHHHHHHHH.T.T..TST CS
         Ank  2 GnTPLHlAatngkkriiklLL.h.G..Anl 27
                Gn++ H Aa +g+ +ii  LL + G  +++
  KHJ34541.1 60 GNYVYHEAALRGNYEIIDILLdQeGfeCDP 89
                88889*9**99**********755766666 PP

  == domain 3  score: 15.6 bits;  conditional E-value: 6.5e-06
                 SBBHHHHHH........HHTT......HHHHHHHH.TTTSTTCBT CS
         Ank   2 GnTPLHlAa........tngk......kriiklLL.hGAnlnald 31 
                 G+TPLH A+        +n++       + i++ + +G+++ +++
  KHJ34541.1  95 GDTPLHSAVrfinslpnSNKSevenfaRELISMMIeSGSDPRIKN 139
                 9*******8977776654444887777778888898899998887 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.66   1.7e+03      40      52 ..      24      36 ..      23      54 .. 0.67
   2 !   21.9   0.0   7.5e-08   0.00019       4      45 ..      63     105 ..      60     108 .. 0.89
   3 ?    0.2   0.0      0.49   1.3e+03      16      38 ..     124     145 ..     117     161 .. 0.70

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.66
       Ank_4 40 hiAakrgnveilk 52
                + Aa+++n + l+
  KHJ34541.1 24 IAAARGNNTDLLE 36
                4455555666654 PP

  == domain 2  score: 21.9 bits;  conditional E-value: 7.5e-08
       Ank_4   4 aLhyaaisgrlelvrlLlek.gadinaqdnrsGetalhiAakr 45 
                 ++h aa  g++e++++Ll++ g +++  +  +G+t+lh A+++
  KHJ34541.1  63 VYHEAALRGNYEIIDILLDQeGFECDPISRMEGDTPLHSAVRF 105
                 69****************99899977766668********986 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.49
       Ank_4  16 lvrlLlekgadinaqdnrsGeta 38 
                 l+   +e+g d+    n+  +t+
  KHJ34541.1 124 LISMMIESGSDPRIK-NKAKLTP 145
                 455667888888776.8876665 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.12   3.1e+02      20      36 ..      23      39 ..      11      55 .. 0.86
   2 !   10.8   0.0   0.00019      0.49       7      54 ..      51     100 ..      45     102 .. 0.85
   3 ?    1.2   0.0       0.2     5e+02      16      25 ..      95     104 ..      86     108 .. 0.76
   4 !    6.0   0.0     0.006        15      35      56 .]     124     149 ..     119     149 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.12
       Ank_5 20 LhvAakygaadvvrlLl 36
                L+ Aa++++ d++++++
  KHJ34541.1 23 LIAAARGNNTDLLEKII 39
                677999******99987 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00019
       Ank_5   7 advnrldgggntpLhvAakygaadvvrlLl...argadlnltdsrGltald 54 
                   +n+  + gn + h Aa +g+ +++ +Ll    +++d+  + + G+t+l+
  KHJ34541.1  51 LLNNTITPIGNYVYHEAALRGNYEIIDILLdqeGFECDPISRME-GDTPLH 100
                 567999999*********************98888888877774.688886 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.2
       Ank_5  16 gntpLhvAak 25 
                 g tpLh A++
  KHJ34541.1  95 GDTPLHSAVR 104
                 3399999987 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.006
       Ank_5  35 Ll....argadlnltdsrGltaldlA 56 
                 L+    + g+d++++++  lt+++lA
  KHJ34541.1 124 LIsmmiESGSDPRIKNKAKLTPYQLA 149
                 44444699****************99 PP

>> DUF720  Protein of unknown function (DUF720)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1      0.64   1.6e+03      79      98 ..      37      56 ..      19      69 .. 0.55
   2 ?   14.5   0.1   9.6e-06     0.024      52     100 ..     136     184 ..     106     188 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.64
      DUF720 79 qlsaarqraqvisssvntns 98
                ++ a   +aq + + +n ++
  KHJ34541.1 37 KIIASFSNAQEVAQLLNNTI 56
                34444444444444444444 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 9.6e-06
      DUF720  52 esaneseiqavqssNqavsAsReaiqdqlsaarqraqvisssvntnsni 100
                   +n+ +++  q    + +A R  iqd + a ++++  i+++ n   ++
  KHJ34541.1 136 RIKNKAKLTPYQLADPQNTALRRVIQDAIDAEQNKGDFILENENLDETE 184
                 5689999*********************************999877765 PP

>> TFIIS_M  Transcription factor S-II (TFIIS), central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       1.4   3.6e+03      66      77 ..      30      41 ..      18      66 .. 0.67
   2 ?   13.0   0.0   4.3e-05      0.11      24      81 ..     113     166 ..      82     168 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 1.4
                T-HHHHHTSSSS CS
     TFIIS_M 66 kNpeLrrrvlsg 77
                +N++L ++++  
  KHJ34541.1 30 NNTDLLEKIIAS 41
                566666666543 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 4.3e-05
                 .--THHHHHHHHHHHHHHHT------HHHHHHHHHHHHHS-TT-HHHHHTSSSS--ST CS
     TFIIS_M  24 eeedveelaaeiEealfekekkstdkkykqkvrslvfNLkdkkNpeLrrrvlsgeisp 81 
                 ++++ve++a e+ + + e   + +d ++k+k +   + L d++N+ Lrr v++ +i++
  KHJ34541.1 113 NKSEVENFARELISMMIE---SGSDPRIKNKAKLTPYQLADPQNTALRR-VIQDAIDA 166
                 2679*********99999...67899********************986.55556665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (196 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       615  (0.034302); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1477.27
//
Query:       KHJ34542.1  [L=1052]
Description: putative clumping factor b protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1052 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1346  (0.0750739); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.76u 0.26s 00:00:01.02 Elapsed: 00:00:00.42
# Mc/sec: 7587.34
//
Query:       KHJ34543.1  [L=539]
Description: putative repressible acid phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-35  123.2   0.0      2e-35  122.9   0.0    1.1  1  His_Phos_2  Histidine phosphatase superfamily (branch 2)


Domain annotation for each model (and alignments):
>> His_Phos_2  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.9   0.0   1.1e-39     2e-35       2     374 ..      60     435 ..      59     468 .. 0.89

  Alignments for each domain:
  == domain 1  score: 122.9 bits;  conditional E-value: 1.1e-39
                 EEEEEEEEE--SBB-SHHHHHHHHHHHHHHHH.........HHCHHTGCCGGGGT.........--SSSTTS.B-HHHHHHHHHHHHHHHHHCH..... CS
  His_Phos_2   2 LksvvvviRHGdRtPkqkvkksvtspiflsllkkhkeKlkqlktalekkghfpgtyrkveveklqlilkwggelthaGrkqaeelGrqfrqrYp..... 95 
                 ++sv+v+ RH +R+P+     s   +i +  +k  + K+k  + ++e+ ++f++++        q i   g+ lt  G    ++ G  f+++Y      
  KHJ34543.1  60 IESVQVIQRHTERFPTFYS--SNVNEINRLTSKLSDFKSKKSNKSFEGILSFLNSW--------QNIFSGGHYLTGPGAASQFAAGVDFWNKYGrilyn 148
                 89*************9766..4566666666665777****************988........******************************99999 PP

                 .........TCCHTTSS--.TTEEEEEESSHHHHHHHHHHHHHHCHCCC---S-TTSTTGGG-TTTTCCCEEEHHHHCCCCHHCTTSHHTCHHHCHHHT CS
  His_Phos_2  96 .........lgLlrlhlty.kdlkirassegRviaSAaafakGllglegeltdllskdkdllddsnaakdlldeakkklkelltegaeacpafewpikv 184
                           ++ +   t+  ++  r+++++R++ S  ++a G++g      +   + +    +++ ++ +++e++k+  +++++ + +c++f +  + 
  KHJ34543.1 149 assgqlaydPNFPNG--TArPTVVLRTTEQSRIYNSQINWALGFFGSTW---QKKPNPSLVNATQPFKVLIIPEESKEKWNNTLAPYISCSNFLK-TEI 241
                 999877764333333..4458999*********************8888...4455555666788999999************************.999 PP

                 GGHCHHHHCHCCCCCHHHHHHHCHHHCTTEEEE-HHHHHHHHHHHHHHHHHHCT-TTGGGCTH..HCHHHHHHHHHHHHHHHC........TTTCCCCH CS
  His_Phos_2 185 akrvdelvkylkedmdeniakrleqlcpgesnllakerwdklercfyeknkfdiskicdlydemkydalhnrylkdleelyklakvipqEygigpeekl 283
                  + ++ l++++   + + +++rl++  p   +l+++++ ++  +c+ye++  ++s++c++++e  +++  ++   +   +y+         g+g+++++
  KHJ34543.1 242 RRMGKILQENYVTGYIGTATERLQKVAPDGLELSNQDVFAMQLLCAYETAYIGNSEFCQIFTE--EEWASFDRSWEIM-FYNT-------FGYGNPTGR 330
                 9999999********************************************************..***9998877776.6777.......7******** PP

                 HHHHHHHHHHHHHHCTSSSEECCS..........CCCECS-SEEEEEE-HHHHHHHHHHCTTTTTBTTB.SSS.....TTT..HCCCS-CT-EEEEEEE CS
  His_Phos_2 284 kiGllllnpllkkilndlqrtree..........atperhvrlrlyfthdshiysllnaLglpeelagedslaa....ldrlsaspelpymsqivfely 368
                 ++G+++++++l++++++l   + +          at+++ ++++++f+hd  i+s+l+aL ++   ++++ +++     ++++ s+  p+++++v+e  
  KHJ34543.1 331 AQGIGYVQEILARLNHSLISSSSTsvnstldgnpATFPTSQAFYADFSHDDVIISILAALSIEYFHTPPNITQFpinsDRKFRLSNLAPFGARLVTETI 429
                 **********************88************************************999999999788879999999*****************9 PP

                 EETCTT CS
  His_Phos_2 369 edssek 374
                  ++s +
  KHJ34543.1 430 GCNSAN 435
                 995543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (539 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       580  (0.0323498); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.38
# Mc/sec: 4273.39
//
Query:       KHJ34544.1  [L=410]
Description: hypothetical protein EV44_g3661 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.8e-09   35.4   0.4    2.4e-08   34.2   0.2    1.7  2  rve              Integrase core domain
    2.1e-06   27.5   0.7    6.8e-06   25.8   0.7    1.8  1  gag_pre-integrs  GAG-pre-integrase domain
    0.00029   20.9   1.0    0.00044   20.3   0.2    1.8  2  Integrase_H2C2   Integrase zinc binding domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       1.2   6.9e+03      81      99 ..      56      75 ..      38      79 .. 0.68
   2 !   34.2   0.2     4e-12   2.4e-08       6     117 ..     246     350 ..     241     352 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1.2
         rve 81 k.afrefladlgirvsftrp 99
                   f++f a  +i++s+ ++
  KHJ34544.1 56 TaGFQQFQAYQRIKPSLINK 75
                24789999999999888776 PP

  == domain 2  score: 34.2 bits;  conditional E-value: 4e-12
         rve   6 elwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpqd 104
                 + + vDv++++      ++ +l+vvd ++++  a  l + ++++t+ a+  + ++ + g  p+++++D gs +t k+f++ + ++ + v++ ++   ++
  KHJ34544.1 246 HSIIVDVMYID------NHPVLHVVDEATNFQAARWLQNISSKHTWDAIRACWIDVYIGP-PDYIVTDAGSNFTGKEFHQCATSMAVCVKNIPVEAHWS 337
                 55667777777......5889*******************99999999999999999998.************************************** PP

         rve 105 nGkvErfhrtlkd 117
                  G+vEr h +l++
  KHJ34544.1 338 IGLVERYHALLRR 350
                 **********998 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.7   1.1e-09   6.8e-06      17      64 ..     174     225 ..     160     227 .. 0.72

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 1.1e-09
  gag_pre-integrs  17 lsknkssinlWHrRLGHpsfsrlkkLfkkgl...lpglkisk.sevCeaCql 64 
                      +  n++++++ HrR+GHps +rl +L +k+    +p+  i++ +++C++Cq+
       KHJ34544.1 174 CFLNETELRRLHRRFGHPSAERLYNLLSKSGhndVPREYINQiNKFCDHCQK 225
                      3448999***************999887544233455444446899****97 PP

>> Integrase_H2C2  Integrase zinc binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.2   7.3e-08   0.00044      10      56 ..     181     227 ..     173     229 .. 0.94
   2 ?   -3.7   0.0       2.4   1.4e+04      25      39 ..     275     289 ..     270     291 .. 0.68

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 7.3e-08
  Integrase_H2C2  10 lkeaHdsagHlGiektlerlrrryyWpgmrkdvkkyvksCetCqrrk 56 
                     l+++H   gH+++e+ +++l++  +    r+ ++++ k C+ Cq+++
      KHJ34544.1 181 LRRLHRRFGHPSAERLYNLLSKSGHNDVPREYINQINKFCDHCQKHR 227
                     899******************************************97 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 2.4
  Integrase_H2C2  25 tlerlrrryyWpgmr 39 
                      l+ ++++  W  +r
      KHJ34544.1 275 WLQNISSKHTWDAIR 289
                     567777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       596  (0.0332422); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.36
# Mc/sec: 3400.91
//
Query:       KHJ34545.1  [L=212]
Description: hypothetical protein EV44_g3316 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00033   20.6   2.4    0.00056   19.9   2.4    1.4  1  zf-CCHC    Zinc knuckle
     0.0033   17.2   4.0      0.007   16.2   4.0    1.5  1  zf-CCHC_2  Zinc knuckle
  ------ inclusion threshold ------
       0.15   11.7   3.3       0.26   11.0   3.3    1.4  1  zf-CCHC_5  GAG-polyprotein viral zinc-finger


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   2.4   9.4e-08   0.00056       2      17 ..     116     131 ..     115     131 .. 0.92

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 9.4e-08
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                  C+ C + GH+a+dC+
  KHJ34545.1 116 ECRICRRKGHWAKDCS 131
                 7**************5 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   4.0   1.2e-06     0.007       6      19 ..     117     130 ..     116     130 .. 0.98

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 1.2e-06
   zf-CCHC_2   6 ChiCgkkGHyIqdC 19 
                 C+iC  kGH+ +dC
  KHJ34545.1 117 CRICRRKGHWAKDC 130
                 ************** PP

>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   3.3   4.4e-05      0.26       3      19 ..     115     131 ..     113     134 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.4e-05
                 -B-TTT-SSBS-TTT-- CS
   zf-CCHC_5   3 glCpRCkkgkHwardCh 19 
                 + C  C +  Hwa+dC 
  KHJ34545.1 115 NECRICRRKGHWAKDCS 131
                 67999***********6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1225  (0.0683251); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1564.24
//
Query:       KHJ34546.1  [L=178]
Description: putative deoxyuridine 5 -triphosphate nucleotidohydrolase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-45  153.4   0.0    2.8e-45  153.1   0.0    1.1  1  dUTPase   dUTPase
  ------ inclusion threshold ------
       0.18   10.5   0.0       0.23   10.2   0.0    1.1  1  DCD       2'-deoxycytidine 5'-triphosphate deaminase (DCD)


Domain annotation for each model (and alignments):
>> dUTPase  dUTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.1   0.0   3.2e-49   2.8e-45       3     129 .]      51     178 .]      49     178 .] 0.98

  Alignments for each domain:
  == domain 1  score: 153.1 bits;  conditional E-value: 3.2e-49
                 CTBEBESSTT-SSEEEE-SSSEEEETTEEEEEEEEEEEE--TTEEEEEEE-HHHHHHHEEEEE.EEEETTBTSEEEEEEEE-SSS-EEE-TT-EEEEEE CS
     dUTPase   3 aeiptrkspesAgyDlsaakdltvkpgetvlvptdisiklpdglaalilpRSglaakglivvp.gvidsdyrGevkvvlfnltkkdvkikkgdRiAqLi 100
                 a +ptr+s+ +AgyDl+aa+++ v+ +++ lv td+++++p g++++i+pRSgla k++i+++ gvid+dyrGevkv lfn+++ d+ ik+gdRiAqL+
  KHJ34546.1  51 ARLPTRGSAFAAGYDLYAAREISVPSRGKALVATDLALAVPPGTYGRIAPRSGLASKHMIDTGaGVIDADYRGEVKVLLFNHGEIDFAIKEGDRIAQLV 149
                 679************************************************************************************************ PP

                 EEEBECGEEEEESSTTTESSBTTXTTTTX CS
     dUTPase 101 fariltaeleevetlkatergeggfgssg 129
                 +++i t+e++eve+l++++rg++gfgs+g
  KHJ34546.1 150 LEKISTPEVKEVEALEDSARGSNGFGSTG 178
                 **************************997 PP

>> DCD  2'-deoxycytidine 5'-triphosphate deaminase (DCD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   2.5e-05      0.23     289     335 ..     109     155 ..      96     172 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 2.5e-05
         DCD 289 ffDpGFGlaeaggegsravLevRsrevPFiledgqivgrlvyermae 335
                 ++D+G G+ +a+ +g   vL     e+ F +++g  +++lv+e++++
  KHJ34546.1 109 MIDTGAGVIDADYRGEVKVLLFNHGEIDFAIKEGDRIAQLVLEKIST 155
                 579*****************************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (178 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       189  (0.0105416); expected 358.6 (0.02)
Passed bias filter:                      176  (0.0098165); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.18s 00:00:00.55 Elapsed: 00:00:00.34
# Mc/sec: 1566.19
//
Query:       KHJ34547.1  [L=310]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.092   13.0   0.0        0.3   11.3   0.0    1.8  2  APS-reductase_C  Adenosine-5'-phosphosulfate reductase beta s


Domain annotation for each model (and alignments):
>> APS-reductase_C  Adenosine-5'-phosphosulfate reductase beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   1.7e-05       0.3      15      72 ..      67     126 ..      60     133 .. 0.75
   2 ?   -2.3   0.0       0.3   5.4e+03      33      62 ..     163     194 ..     159     204 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 1.7e-05
                      EEEE-SSE..EEEEEE-TTS-EEEEEEE--SS-TT---TTTT-----HHHHTSS--TTTT CS
  APS-reductase_C  15 vplrgeek..imWtvkfRnGkvkrfkfpirTtpeGsaqpladvaepskedldselLftep 72 
                      +p r++e   ++W++  RnG+ k  +     t+  +a+  + v++ ++ ++ + l   +p
       KHJ34547.1  67 RPPRENETtkLSWKIVTRNGQKKACVINTSSTKSAQAKNANHVEHLNEPKVTNILSLRQP 126
                      5667666556*************9988887777777777777777766666666655555 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.3
                      -EEEEEEE--SS-TT---T.TTT--.---HHH CS
  APS-reductase_C  33 kvkrfkfpirTtpeGsaqp.ladva.epsked 62 
                       vk++   i     G+++p   +++ +p ++d
       KHJ34547.1 163 VVKKLAINISPASIGRIKPvHTGFTlSPCNDD 194
                      67888888888899999997666652344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 2528.83
//
Query:       KHJ34548.1  [L=99]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.016   15.0   0.7      0.029   14.2   0.7    1.6  1  zf-CCHC_6  Zinc knuckle
      0.032   14.3   2.5      0.035   14.1   2.5    1.0  1  DUF4674    Domain of unknown function (DUF4674)


Domain annotation for each model (and alignments):
>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.7   3.3e-06     0.029       2      19 ..       6      22 ..       5      42 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.3e-06
   zf-CCHC_6  2 vKCknCGAFGHtarSkrC 19
                +KC+nCG   H+  S+rC
  KHJ34548.1  6 IKCRNCGG-PHRSDSRRC 22
                7******9.5******** PP

>> DUF4674  Domain of unknown function (DUF4674)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   2.5   3.9e-06     0.035      72     155 ..       1      84 [.       1      97 [. 0.67

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 3.9e-06
     DUF4674  72 ksvLlitCkvCnkttkhkgksrsflaplkskeetpksksslktkk.kktksskkktktsvsksnskgkspaltfrspssgqstsv 155
                 ++++ i+C++C    +   + r  ++p  s   t+++ ++  +   +k k  ++++k++ +   +++++p++t  ++  g s+ +
  KHJ34548.1   1 MCMVAIKCRNCGGPHRS-DSRRCLVRPTRSGIPTKEQLKKYMQAGeRKLKAVARAKKAELKAATTEESTPNITYSKIMDGTSSGS 84 
                 78999********9987.4555566777777666666555555541555556666668888888888889998766666555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1316  (0.0734006); expected 358.6 (0.02)
Passed bias filter:                      749  (0.0417759); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.35
# Mc/sec: 840.70
//
Query:       KHJ34549.1  [L=385]
Description: hypothetical protein EV44_g6523 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-34  118.7  31.1    3.1e-28   99.1  21.7    3.1  2  DUF3984   Protein of unknown function (DUF3984)


Domain annotation for each model (and alignments):
>> DUF3984  Protein of unknown function (DUF3984)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   2.0   1.4e-08   0.00024       1      26 [.      14      39 ..      14      47 .. 0.91
   2 !   99.1  21.7   1.8e-32   3.1e-28      66     327 ..      48     308 ..      43     311 .. 0.70

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 1.4e-08
     DUF3984  1 RkrRSstnLnhlsLaPLtsrlPlddd 26
                R +RS +nLnhlsLaPL+ r+Pl d 
  KHJ34549.1 14 RGSRSLQNLNHLSLAPLSLRMPLSDP 39
                678********************986 PP

  == domain 2  score: 99.1 bits;  conditional E-value: 1.8e-32
     DUF3984  66 PrllShsrsasrtrlhsRsksatg.........kslstteLqskksasplhhqrskekkksktrrrrkeasktasekea.dsewllRaGlalasstREe 154
                 Pr+ Shsrs++ +++ sR++ +++         ks+s+t L s+k+ ++l   +  + ++ ++  + +   +  s+++  ds+w +R+G++lass+RE+
  KHJ34549.1  48 PRINSHSRSVQASSTLSRTSNSPArklsktgfpKSKSSTYLMSMKNVHNLSMTPG-DGRSYQNILKDEIGLDPLSHRDWnDSDWFMRTGAILASSARES 145
                 9**********99998888777776777777999999999999999777777777.555566666666666777777888******************* PP

     DUF3984 155 kGqsWLvkrasSTsLvserelarerekasrersksesrsrsrrsslstP...aalSRrgSrshsaskrgsRvd.lamTplesrrtkaessesrsteese 249
                 kGq+WL +rasSTsLv    l+++  ++  +  +  sr+ s+r+s+         SRr+S  +s+    sR + l  T l sr++      srs ++ +
  KHJ34549.1 146 KGQAWLFSRASSTSLVR---LQDDGYQEWAQDRRPYSRRTSNRGSMFGSfdeDSSSRRTSTISSND-PASRCGsLPATRLASRAM------SRSGSKVQ 234
                 ****************8...3333332223444556788888888874433347899999888665.466765144444444333......33444444 PP

     DUF3984 250 eddeelvPDFvdedirlEmaeleqeelseddessvsassdsesdeedeedEaevrrLvrergfGlGsWidrlvewtlf 327
                  +++ lv D  d     E    ++  ++e d   +++   s++ e ++ dE+++r+L r+   GlG+Wi+r+++w+l 
  KHJ34549.1 235 LHSSPLVAD-SDSYFDYENFDCDEPYIEEPDFLGIKV---SHDLEVEKQDEDTIRKLARDYSQGLGGWIERMLGWRLI 308
                 444445555.345555555555555444333223333...334444477**************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       465  (0.0259356); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2777.47
//
Query:       KHJ34550.1  [L=154]
Description: putative d-tyrosyl-trna deacylase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-50  171.2   0.1    2.1e-50  171.0   0.1    1.0  1  Tyr_Deacylase  D-Tyr-tRNA(Tyr) deacylase
  ------ inclusion threshold ------
      0.099   13.3   0.1       0.17   12.6   0.1    1.3  1  RhoGAP-FF1     p190-A and -B Rho GAPs FF domain


Domain annotation for each model (and alignments):
>> Tyr_Deacylase  D-Tyr-tRNA(Tyr) deacylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.0   0.1   2.3e-54   2.1e-50       1     142 [.       2     145 ..       2     147 .. 0.97

  Alignments for each domain:
  == domain 1  score: 171.0 bits;  conditional E-value: 2.3e-54
                    EEEEEEEEEEEEEETTEEEEEESSEEEEEEE-BTT--HHHHHHHHHHHHH-EEEEETTSS.EEEETTTTT-EEEEEE-GGGGSBTSSSSS-BGTTB CS
  Tyr_Deacylase   1 raviqrvksAsvtvegevvgsigkGllvlvgvekedteedleklakkilnlrifedeegk.mnlsvkdvggevLvVsqftLyadtrkGrrpsfhka 95 
                    +a++qrv sAsv+v++++v+sigkG+lv+ +++ +dte++++++a k++n+++++de+g+ ++l+v d++ge+L+VsqftL a+trkG +p+fh a
     KHJ34550.1   2 KAILQRVLSASVSVDKNLVSSIGKGVLVFAAIAPGDTEKEIDTIAAKVVNMKLWSDETGNrWKLNVGDIEGEILCVSQFTLLASTRKGSKPDFHGA 97 
                    79*************9***************************************988877*********************************** PP

                    --HHHHHHHHHHHHHHHHHCTC.TTEEE--TTS-EEEEEEEEEEEEEE CS
  Tyr_Deacylase  96 akpeeaeelyekfveklrerlg.ekvetGeFgadmkvslvndGPvtil 142
                    + +e+a+ely+ fve+++e++  ekv++G+F+a+m+v+lvndGPvt+ 
     KHJ34550.1  98 MGGEKAKELYQLFVERVKEKYImEKVKEGIFQANMEVALVNDGPVTLE 145
                    *******************877688*********************85 PP

>> RhoGAP-FF1  p190-A and -B Rho GAPs FF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.9e-05      0.17      48      78 ..      94     124 ..      90     125 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.9e-05
  RhoGAP-FF1  48 yvelfGtekakklFrrhikkLkeehikkrrk 78 
                 +   +G ekak+l++ +++++ke++i +++k
  KHJ34550.1  94 FHGAMGGEKAKELYQLFVERVKEKYIMEKVK 124
                 666789*********************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       562  (0.0313459); expected 358.6 (0.02)
Passed bias filter:                      452  (0.0252106); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1188.69
//
Query:       KHJ34551.1  [L=290]
Description: putative 3-oxoacyl-(acyl-carrier-protein) reductase 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.1e-45  153.8   0.2    1.3e-39  136.2   0.0    2.0  2  adh_short_C2   Enoyl-(Acyl carrier protein) reductase
    7.5e-45  152.8   0.1    9.4e-45  152.5   0.1    1.1  1  adh_short      short chain dehydrogenase
    4.1e-17   62.7   0.1    5.6e-17   62.2   0.1    1.1  1  KR             KR domain
      0.003   17.1   0.0      0.011   15.3   0.0    1.8  1  Epimerase      NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.058   12.7   0.0        0.1   11.9   0.0    1.4  1  THF_DHG_CYH_C  Tetrahydrofolate dehydrogenase/cyclohydrolase,
       0.07   12.5   0.0       0.68    9.3   0.0    2.0  1  GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.2   0.0   4.2e-43   1.3e-39       1     184 [.      23     213 ..      23     239 .. 0.87
   2 !   16.1   0.0   2.1e-06    0.0063     195     233 ..     248     286 ..     235     287 .. 0.91

  Alignments for each domain:
  == domain 1  score: 136.2 bits;  conditional E-value: 4.2e-43
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTTSE..E....EE--TTSHHHHHHHHHHHHHHH..SSEEEEEE-----EGCSS-GGG CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneeakkrveelaeelgae..v....lecDVtdeeqvealveevvekf..gklDilvnnagiapklkgpfle 89 
                   Ga +gIG++iA+ la++Ga+++l + +  + + +++la++l ++  v    +++D  + +  + +++++++k+   +lDi+vnnagi +   g++++
    KHJ34551.1  23 GASRGIGAGIARNLASKGAKLILNYTSSTSTQICNDLASKLTEAygVqhivVQADMGSLSGPDFIIRKAASKIpnFRLDIIVNNAGILTV--GKIAD 117
                   999************************999777666666665442323346**********************8789*************..***** PP

                   H-HHHHHHHHHHHTHHHHHHHHHHHHHCTSC..CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTT CS
  adh_short_C2  90 tsreefdraldvnlyslfllakaalplmkeg..gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikg 184
                   ++ e+fdr+ +vn+++ +ll+ aalp++ +   g++vn+ss++a+ ++ ++++yg +Ka+l a+tr++A+el+  + +vN++ pgp+ T++++  + 
    KHJ34551.1 118 CDMEDFDRVYSVNVRGPLLLMMAALPYLPHDrsGRVVNVSSISATSGLLGQSVYGGSKASLDAMTRTWARELAG-RATVNSINPGPVITDMWQTTDL 213
                   **************************8877668*****************************************.99**************876653 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 2.1e-06
                   HSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTG CS
  adh_short_C2 195 raplgrlgtpeevaeaalfLasdeasyitGqtlvvDgGl 233
                   ++  gr ++++e+a ++ +L+ +e+ ++tGq++ ++gGl
    KHJ34551.1 248 EILGGRPARVDEIAGIVGMLVGNESGWCTGQVICANGGL 286
                   56668999******************************7 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.5   0.1   3.2e-48   9.4e-45       1     190 [.      17     211 ..      17     215 .. 0.94

  Alignments for each domain:
  == domain 1  score: 152.5 bits;  conditional E-value: 3.2e-48
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEE.EESC..HHHHHHHHHHHHHT.TSEEEEEE-TTTSHHHHHHHHHHHHHHH..SSESEEEE---SS--SSG CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvv.vdrs..eekleevakelkee.gakalaiqvDvtdreevealvekavkkl..gkldvLvnNAGitgsgpf 93 
                 k++lvtGas+GIG  ia++la++Gak+++ + +s   + ++ +a++l e+ g + +++q+D+ + +  + +++ka++k+   +ld++vnNAGi  +g++
  KHJ34551.1  17 KTALVTGASRGIGAGIARNLASKGAKLILnYTSStsTQICNDLASKLTEAyGVQHIVVQADMGSLSGPDFIIRKAASKIpnFRLDIIVNNAGILTVGKI 115
                 79**************************9744430034468899999999*****************************7779**************** PP

                 GGCSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHHH CS
   adh_short  94 selseeewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmakel 190
                 ++ + e+++rv++vN+ g++ll+ a+lp++   +sGr+vnvsS+ +  ++ g+++Y+ sKa ++++tr++a+ela +  +vn+++PG+v Tdm +++
  KHJ34551.1 116 ADCDMEDFDRVYSVNVRGPLLLMMAALPYLPHDRSGRVVNVSSISATSGLLGQSVYGGSKASLDAMTRTWARELAGR-ATVNSINPGPVITDMWQTT 211
                 ****************************************************************************8.9**************9876 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.2   0.1   1.9e-20   5.6e-17       2     168 ..      18     190 ..      17     204 .. 0.86

  Alignments for each domain:
  == domain 1  score: 62.2 bits;  conditional E-value: 1.9e-20
                 EEEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHT.T-EEEE----TT-HHHHHHHHHHHHHHS..S---EEEE---------T CS
          KR   2 tylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaeleal.gaevevvaaDvsdkdavealleeikaee..ppikGvihaAgvlrdkll 97 
                 t l+tG+  g+G  +ar la+kga+ ++  + s ++++  ++l ++l++  g++  vv+aD  + +    +++++ ++    ++  +++ Ag+l  +++
  KHJ34551.1  18 TALVTGASRGIGAGIARNLASKGAKLILNYTSS-TSTQICNDLASKLTEAyGVQHIVVQADMGSLSGPDFIIRKAASKIpnFRLDIIVNNAGILTVGKI 115
                 579**********************99988888.67777777888887755****************9999999998885567999************* PP

                 TT--HHHHHHHHTTTTHHHHHHHHHTTT....S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHHHHH CS
          KR  98 eemtaedleqvlapKvkGawnLhelled....esldffvlfSSiagllgsagqanYaaaNaflDalaeyrrsqgl 168
                 +++++ed+++v++  v+G   L  +  +    ++   +v +SSi+++ g  gq+ Y    a lDa+ ++++++ +
  KHJ34551.1 116 ADCDMEDFDRVYSVNVRGPLLLMMAALPylphDRSGRVVNVSSISATSGLLGQSVYGGSKASLDAMTRTWARELA 190
                 *******************999887655555577778******************************99887643 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   3.5e-06     0.011       1     115 [.      19     158 ..      19     200 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 3.5e-06
                 EEEETTTSHHHHHHHHHHHHCTSE.EEEEES-STTTTCHHCHHC.................EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHH.. CS
   Epimerase   1 ilVtGatGfiGsalvkallekgye.vigldrlssasntarledl.................elveldltdrsalerlfkeeqpdavihlAavggvaa.. 79 
                 +lVtGa+  iG+ ++++l++kg + +++ ++ +s++  + l+ +                 +l   d+  r+a  ++ + ++ d++++ A++ +v+   
  KHJ34551.1  19 ALVTGASRGIGAGIARNLASKGAKlILNYTSSTSTQICNDLASKlteaygvqhivvqadmgSLSGPDFIIRKAASKIPN-FRLDIIVNNAGILTVGKia 116
                 59********************998888888888877777777789999999955544444444444444445555555.6999999999865554422 PP

                 ..HHHSHHHHHHHHTHHHHHHHHHHHHHTCT....EEEEEEE CS
   Epimerase  80 ..ssedpadfieknlqgtlnlleaarkagvk....rllflsS 115
                    +ed  +++  n++g l l+ aa  + ++    r++++sS
  KHJ34551.1 117 dcDMEDFDRVYSVNVRGPLLLMMAALPYLPHdrsgRVVNVSS 158
                 235777788888999999999999996633223458888888 PP

>> THF_DHG_CYH_C  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.4e-05       0.1      33      94 ..      13      74 ..       8      93 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.4e-05
                   --TT-EEEEE---TTTHHHHHHHHHCTT-EEEEE-TTSCCHHHHHCCSSEEEE-SS-TT-B- CS
  THF_DHG_CYH_C 33 elegkkvvvvGrsnivgkplallLleknatVtvchsktkdlaeitreadivvvavGkpelik 94
                    legk+++v G+s+ +g  +a  L++k+a   +  +++++ +     a  +  a G+++++ 
     KHJ34551.1 13 PLEGKTALVTGASRGIGAGIARNLASKGAKLILNYTSSTSTQICNDLASKLTEAYGVQHIVV 74
                   799***********************988776666666555555556777777777766653 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00023      0.68       1     129 [.      20     158 ..      20     235 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00023
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHHH.......T-SEEEE--S---HH CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklhkgDltDssslerllaev.......qpdevynLAAqshVd 89 
                    L+TG +  iG+ +a+ L +kg +   i +++ss++t+  + la++  e +  +  ++++D+   s  + +++++       + d ++n A+   V+
     KHJ34551.1  20 LVTGASRGIGAGIARNLASKGAKL--ILNYTSSTSTQICNDLASKLTEAYGVQHIVVQADMGSLSGPDFIIRKAaskipnfRLDIIVNNAGILTVG 113
                    89999999************9988..7899************999888888899999999988776666665543333444677777777777765 PP

                    H....HTTSHHHHHHHHTHHHHHHHHHHHHC.T..TTSEEEEEEE CS
  GDP_Man_Dehyd  90 v....sfekPeytaevnvlGtlrLLeairal.glekkvrfyqaSt 129
                    +     +e+ ++++ vnv G l L+ a+  +   +++ r++ +S+
     KHJ34551.1 114 KiadcDMEDFDRVYSVNVRGPLLLMMAALPYlPHDRSGRVVNVSS 158
                    511113455666777777777776666654423344555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2045.19
//
Query:       KHJ34552.1  [L=368]
Description: putative dihydroceramide delta -desaturase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.1e-27   96.6  15.0    3.1e-27   96.0  15.0    1.2  1  FA_desaturase  Fatty acid desaturase
    1.8e-19   68.9   0.3      3e-19   68.2   0.3    1.3  1  Lipid_DES      Sphingolipid Delta4-desaturase (DES)


Domain annotation for each model (and alignments):
>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.0  15.0   3.4e-31   3.1e-27       2     243 ..     100     329 ..      99     340 .. 0.87

  Alignments for each domain:
  == domain 1  score: 96.0 bits;  conditional E-value: 3.4e-31
  FA_desaturase   2 swlalllalllglf.llgitgslaHeaaHgalfkkrklnrwlndllgallglplgisys.awrisHlrHHaytngpdeDpdlaplalsrfeglfry 95 
                    sw ++l a+++g+   +++ +  +He +H+  f+++k nr l +++   + lp+gi+ys ++r  Hl+HH+ ++ ++ D+dl+        ++ ++
     KHJ34552.1 100 SWKFFLTAYFIGATaNQNL-FLAIHEISHNLAFRSPKANRAL-AIF---ANLPIGIPYSaSFRPYHLTHHKSLGVDGLDTDLP-------TSFEAF 183
                    6889999999999966666.7************999999999.777...899999988637********************97.......666666 PP

  FA_desaturase  96 llrlllgllvlgwllalvlglwlrrlarrrapsksrrrkwrllawlllllawlglwlalllllglalllwlvplllllfllalvl.nyveHyg... 187
                    +l  +lg  +++         + ++l++  +p+  +  +  +  ++ + + +l+ +++++ ++  +l++ ++  +l+++l+ +   +++eHy    
     KHJ34552.1 184 FLDSVLGKAFFA---------TFQILFYAIRPMLIYTVPFSVGHLYNVTVQLLFDYILVSTFSKNSLYYLILSSFLAGSLHPCAGhFIAEHYLlhm 270
                    888999999999.........999999999999999999888888888888888888888777777657777788888888888898899988999 PP

  FA_desaturase 188 ....gdwgerqvetsasirsaswllnlltgnlnyHieHHlfPgvpwyrLpelhrrlrell 243
                        +++++++ +   +++ +  +lnllt+n ++H+eHH fP+vpw+rLp+lh+  +e++
     KHJ34552.1 271 ppsgARDPLTNTQLPETFS-YYGPLNLLTYNVGLHNEHHDFPAVPWSRLPALHELAKEFY 329
                    9***9**************.*********************************9888855 PP

>> Lipid_DES  Sphingolipid Delta4-desaturase (DES)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.2   0.3   3.3e-23     3e-19       2      37 .]      39      74 ..      38      74 .. 0.96

  Alignments for each domain:
  == domain 1  score: 68.2 bits;  conditional E-value: 3.3e-23
   Lipid_DES  2 rsDFeWvytdePHasRRkeILkkhPeikkLmGpdpl 37
                 +DF W+yt+ePH++RR++I+k+hPe++kL+Gp+pl
  KHJ34552.1 39 NHDFFWTYTEEPHRTRRQAIIKAHPEVTKLCGPEPL 74
                58********************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2860.32
//
Query:       KHJ34553.1  [L=184]
Description: putative duf1715 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-08   33.0   4.6    3.5e-08   33.0   4.6    1.7  2  Yae1_N    Essential protein Yae1, N terminal
    0.00086   17.6   0.7     0.0011   17.3   0.7    1.1  1  EzrA      Septation ring formation regulator, EzrA
  ------ inclusion threshold ------
      0.065   13.3   1.6        0.1   12.7   1.6    1.4  1  Med9      RNA polymerase II transcription mediator complex su
        0.1   12.4   0.2       0.15   11.9   0.2    1.3  1  zf-ZPR1   ZPR1 zinc-finger domain


Domain annotation for each model (and alignments):
>> Yae1_N  Essential protein Yae1, N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   4.6   7.8e-12   3.5e-08       1      38 [.      20      57 ..      20      58 .. 0.98
   2 ?   -2.0   0.0      0.68     3e+03       4      27 ..     174     181 ..     173     183 .. 0.38

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 7.8e-12
      Yae1_N  1 GYreGiaeGkeqglqeGfdeGyqeGaqlGlelGqilGv 38
                G+++G+ +G ++g  eG+  G+++G++++ e+G+++G+
  KHJ34553.1 20 GFEQGLIDGEAAGRSEGRTLGLEKGFEKFCEAGRLYGR 57
                9************************************8 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.68
      Yae1_N   4 eGiaeGkeqglqeGfdeGyqeGaq 27 
                 +G                  +Ga+
  KHJ34553.1 174 DGKV----------------KGAK 181
                 3333................3333 PP

>> EzrA  Septation ring formation regulator, EzrA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.7   2.4e-07    0.0011     256     331 ..      92     168 ..      76     172 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 2.4e-07
                 HHHHHHHHHHHHHTT--HHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSSHHHHT--HHHHTTGGG-TT CS
        EzrA 256 elekkieeilerlkeleled.veeelktieeeidsLyddlekEveAkkeveknlkelkeklehlekqnkelkeeldr 331
                 +++k+   +++ ++el++      + ++++++i+sL d++e E  + ++ e+ ++ + ++l++++++++ +++ +d+
  KHJ34553.1  92 QVRKSHVACTASISELDFALpPIPNYQKLSQRIKSLHDLMEPETLSFENTEEAMSDFDDRLKKARAKLRLIQKLIDE 168
                 4555555566777777766414567899********************************************99986 PP

>> Med9  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.6   2.3e-05       0.1       7      63 ..     124     181 ..     118     184 .] 0.84

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.3e-05
        Med9   7 ydilksiekdpnlsskdletktgelrhkLkkarelirelpg.idrsveeqeaeieele 63 
                 +++l+++ + ++ls +++e ++++  ++Lkkar+ +r ++  id+   +q+ +++  +
  KHJ34553.1 124 IKSLHDLMEPETLSFENTEEAMSDFDDRLKKARAKLRLIQKlIDEQRVDQDGKVKGAK 181
                 567888866666***************************9999999999988777655 PP

>> zf-ZPR1  ZPR1 zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2   3.4e-05      0.15      61     138 ..      84     165 ..      70     177 .. 0.56

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.4e-05
     zf-ZPR1  61 eseedlnrqvlkSet.atveipeleleippg....tlegrlttvEGlLeqikeelekeegdqaeredeekekieeflekleel 138
                 e++ d+++qv kS+  +t +i el++ +pp     +l+ r+  + +l+e  + + e ++++ +++ d+  +k+++ l+ +++l
  KHJ34553.1  84 ENNGDIANQVRKSHVaCTASISELDFALPPIpnyqKLSQRIKSLHDLMEPETLSFE-NTEEAMSDFDDRLKKARAKLRLIQKL 165
                 4789*********9537999********8831011333334444444433333332.11111111113344444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       836  (0.0466284); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1351.78
//
Query:       KHJ34554.1  [L=560]
Description: putative ferric reductase like transmembrane component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-18   67.6   0.0    2.1e-18   66.9   0.0    1.3  1  NAD_binding_6  Ferric reductase NAD binding domain
    2.9e-15   56.5  10.0    2.9e-15   56.5  10.0    2.9  3  Ferric_reduct  Ferric reductase like transmembrane component
    1.1e-10   41.6   0.0    2.7e-10   40.3   0.0    1.7  1  FAD_binding_8  FAD-binding domain


Domain annotation for each model (and alignments):
>> NAD_binding_6  Ferric reductase NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.9   0.0   3.5e-22   2.1e-18       1     155 [.     372     540 ..     372     541 .. 0.78

  Alignments for each domain:
  == domain 1  score: 66.9 bits;  conditional E-value: 3.5e-22
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............xx RF
  NAD_binding_6   1 yenvllvagGiGitpfisilkdllkkskkealktkkikliwvvressslewfkdvLneleeeksegnieihiYlTseyea..............ed 82 
                    ++ vl++agG+G++++ s++ dl++k+   +  ++++ +  v r+++++ew++ +Ln l+   s+  +++++++T++ ++              + 
     KHJ34554.1 372 FTKVLFIAGGSGASYTCSLAVDLVRKLG--HSTKTSLDFTLVLRHKDMIEWVSTYLNILA---SSPIVSLQVHVTRKGSEesrnsllplsnfigSF 462
                    689************************8..88999******************9999444...334589********9994555555555555444 PP

                    xxxxxxxxxxxxxxxxxx...........xxxxxxxxxx.......xxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  NAD_binding_6  83 asdqlissiegenseslk...........qgvdavsgtr.......nvkihfgRPnlkevlkdi.askhknssvgvfvCGppklvkevkklv 155
                      d              +           ++vd   ++         ++++ gRP+++++++++    + +++++++ CGp++++ +v++lv
     KHJ34554.1 463 PLD--------------TlytlqnlpnvtEKVDKRDTLTsnifvkaPMELNLGRPDISSLISQAvNISSTTERIAIVACGPNAMMVNVRRLV 540
                    444..............24444445444444444433334557777799*************9967788999***************99987 PP

>> Ferric_reduct  Ferric reductase like transmembrane component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.14   8.3e+02      80     102 ..      29      51 ..       6      58 .. 0.59
   2 ?   -0.0   0.1      0.15   9.1e+02      78     100 ..      83     105 ..      60     113 .. 0.80
   3 !   56.5  10.0   4.9e-19   2.9e-15       1     124 [.     120     235 ..     120     236 .. 0.94

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.14
  Ferric_reduct  80 nllGvlalllliilaitSlkfir 102
                    ++lG++++++l  l++ + ++ r
     KHJ34554.1  29 FALGIMGIVCLYTLYFWAGPLYR 51 
                    23566666666666555555544 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.15
  Ferric_reduct  78 pynllGvlalllliilaitSlkf 100
                     ++ +G   +++l +++ +S+ f
     KHJ34554.1  83 GFISWGHAVICILYVVVSLSVLF 105
                    46679999999999999999654 PP

  == domain 3  score: 56.5 bits;  conditional E-value: 4.9e-19
  Ferric_reduct   1 lGiaalillplalllalRnnflepltglsldklllfHkwlgvlafllallHvilyllnflrfsaldeerlldsllkkpynllGvlalllliilait 96 
                    lG++ ++++ l+++l+l+ ++l+ lt  s++kl+ +H++ g+  ++ ++lH+++yl+   +       + l+  +++ ++ +G+la + l+i+++t
     KHJ34554.1 120 LGWLTVLNMCLSIFLGLKHTPLSLLTDQSYEKLNCLHQVAGYSSIASLFLHTVVYLFSLNK------MGKLSRVIMEKAQVMGILAGFSLLIIFLT 209
                    69******************************************************99886......789************************** PP

  Ferric_reduct  97 SlkfirrrlsyelFyylHhllyvaylll 124
                    ++ ++r ++ ye+Fy+ H+l+++ +++l
     KHJ34554.1 210 AI-SLR-KRHYEVFYVFHILMVLSAIIL 235
                    *3.455.899*************99987 PP

>> FAD_binding_8  FAD-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.3   0.0   4.5e-14   2.7e-10      16     108 ..     288     366 ..     273     367 .. 0.86

  Alignments for each domain:
  == domain 1  score: 40.3 bits;  conditional E-value: 4.5e-14
  FAD_binding_8  16 liklkvskpkkslkykaGqyvyinipslsklfwqsHPFtiasapeddklslvikvksgltkklakkllssskkelenkkaklkvlidGPYGap 108
                      ++++skp k    ++Gq+ +i +p++ ++  + HPFt +sa++ +++   +++++g+t+ l+++ l+     +     +l+   dGPYG+p
     KHJ34554.1 288 GTRVEFSKPLK--STSPGQHYFIWLPDIRTF--ETHPFTCISAENGEFI---VAAQNGFTQSLYQRALKE----P---GVTLRASFDGPYGNP 366
                    56799999999..89**************55..*********9888775...89**************97....4...678999*******86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (560 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       696  (0.0388198); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 4127.15
//
Query:       KHJ34555.1  [L=624]
Description: putative methionyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.9e-147  491.1   0.0   2.4e-147  490.8   0.0    1.1  1  tRNA-synt_1g  tRNA synthetases class I (M)
    0.00017   20.0   0.0     0.0054   15.0   0.0    2.6  2  tRNA-synt_1   tRNA synthetases class I (I, L, M and V)
  ------ inclusion threshold ------
      0.086   12.9   0.0       0.29   11.2   0.0    1.8  2  DUF4944       Domain of unknown function (DUF4944)
       0.17   12.0   2.5       0.33   11.1   2.5    1.4  1  Laminin_EGF   Laminin EGF domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  490.8   0.0  5.3e-151  2.4e-147       1     390 [.      16     407 ..      16     408 .. 0.98

  Alignments for each domain:
  == domain 1  score: 490.8 bits;  conditional E-value: 5.3e-151
                   EEEEE--B--SS---HHHHH.HHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHTT---SEEEETTSHHH CS
  tRNA-synt_1g   1 vlvttalpYangklHlGhll.evisaDifaRykrlrgeevlfvcgtDehGtpielkAekegvtpeelvekvheeikelfkklnisfdkygrttseeh 96 
                   vl+t+alpY+n+++HlG+++ +v+saD+f+Ry++lr++ +lf+cgtDe+Gt++e+kA + + tp++l++++h+++k+++++++isfd++grtt+e++
    KHJ34555.1  16 VLITSALPYVNNVPHLGNVIgSVLSADVFSRYSKLRKRPTLFICGTDEYGTATETKALETNKTPRQLCDEFHKKHKDVYDWFDISFDYFGRTTTEQQ 112
                   69*********************************************************************************************** PP

                   HHHHHHHHHHHHHTT-EEEEEEEEEEETTTTEEE-GGG-EE........-TTS-EE-TTSSB-E................EEE.EEEEEE-GGGGHH CS
  tRNA-synt_1g  97 kelvqeifkklkekgliyekeieqlycpkderflpdryvegtCPkckseeargdqceecgkkleptelinpksaisgskpevketehlffklskfek 193
                   + ++q+if kl+++g+++e++++q yc+++++fl+dr+vegtCPkc ++ argdqc++cg+ l+p eli+p++++ g++p++++t+h+f++l+k+++
    KHJ34555.1 113 TIIAQDIFLKLHRNGYLEERTTKQPYCESHGKFLADRFVEGTCPKCADKGARGDQCDKCGSLLDPLELIEPRCKLDGATPVTRNTSHIFLRLDKVQQ 209
                   ************************************************************************************************* PP

                   HHHHHH.HH-TT..SHHHHHHHH.HHHHT----EE-ESS-SSS-EET..TECCEEE-HHHHHHHHHHHTTTTT-...TTSGGGG.G--S......EE CS
  tRNA-synt_1g 194 klkewieeeeke..leenvkkivkewlkegLkdlaisrdldwGipvP..gaekkvlYVWldAligYisatkelakkkgeeekwkeyWakdkevelvh 286
                    l++w++++ +e  l+ n  +i+k+wl++gL+ ++i+rdl+wG pvP  g e+kvlYVW+dA igY s+t +++      ++w+ +W++ ++v+l++
    KHJ34555.1 210 PLEDWVATKISEggLSPNSVSITKAWLDKGLEGRSITRDLEWGTPVPlpGYENKVLYVWFDACIGYPSITANYT------KDWELWWRNPENVKLYQ 300
                   ******988777889******************************9999************************9......89*****99999***** PP

                   EEEGGGHHHHHTHHHHHHHH..TT----S-EEEE--EEE--------------HHHHHHH.H-HHHHHHHHHHHS-TTS-EEE-HHHHHHHHHHHCC CS
  tRNA-synt_1g 287 figkdiikFHtifwPaillg..aelklpkkvvaheyltvegkKlSkSrgvvvkakealer.ldadllRYylaaeapekkDldfswedfvervNseLa 380
                   f+gkd+++FHti++P  ++g   ++++++ ++a+eyl++e++K+SkSrg++v+ + + e+ +++ ++RYyl+a++pe  D++f+w+ f++ +NseL 
    KHJ34555.1 301 FMGKDNVQFHTIIFPGSQIGtgDKWTKVSYLSATEYLNYEQGKFSKSRGIGVFGDSVKETgIPPSVWRYYLLANRPEVGDTQFEWKAFIAANNSELL 397
                   ******************998899************************************************************************* PP

                   CHHHHHHHHH CS
  tRNA-synt_1g 381 dklgnlvnRv 390
                   ++lgn+vnR 
    KHJ34555.1 398 ANLGNFVNRL 407
                   *********7 PP

>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.2e-06    0.0054      24      80 ..      15      72 ..       6     152 .. 0.89
   2 ?    1.7   0.0     0.013        60     369     433 ..     189     257 ..     170     279 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.2e-06
  tRNA-synt_1 24 efilvdgPPyvtGslHiGhalaktlk.divirykrmkGkevlyvpGwDhaGlaieakv 80
                 +  ++   Pyv+  +H+G+++ ++l  d+  ry++++   +l+  G+D  G a+e+k 
   KHJ34555.1 15 NVLITSALPYVNNVPHLGNVIGSVLSaDVFSRYSKLRKRPTLFICGTDEYGTATETKA 72
                 55677788****************955999************************9864 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.013
  tRNA-synt_1 369 kkpiiyrateqWfvrvke....ladaalkavekvqfvpkskekryaswlen.iqdWciSRqrwWGhripl 433
                  ++  + r t+  f r+++    l+d +  ++++  ++p+s     + wl    +   i R++ WG+++pl
   KHJ34555.1 189 GATPVTRNTSHIFLRLDKvqqpLEDWVATKISEGGLSPNSVS-ITKAWLDKgLEGRSITRDLEWGTPVPL 257
                  555556666667777777333333444444446667777654.34566654166779***********97 PP

>> DUF4944  Domain of unknown function (DUF4944)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.3   5.8e+03      32      63 ..     100     132 ..      85     146 .. 0.63
   2 ?   11.2   0.0   6.5e-05      0.29      62     109 ..     205     252 ..     194     255 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.3
     DUF4944  32 elyWtGdkkeldktvl.eklvvkvddevlldsd 63 
                  + + G ++ +++t++ + + +k+  + +l++ 
  KHJ34555.1 100 SFDYFGRTTTEQQTIIaQDIFLKLHRNGYLEER 132
                 555566666666666525677887777666654 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 6.5e-05
     DUF4944  62 sdveidlkdyaGeelsgGgakedsvsflerleeeeviGhdvtvkveWk 109
                 ++v+ +l+d+   ++s+Gg   +svs+ +   ++ ++G+ +t ++eW 
  KHJ34555.1 205 DKVQQPLEDWVATKISEGGLSPNSVSITKAWLDKGLEGRSITRDLEWG 252
                 56899******************************************6 PP

>> Laminin_EGF  Laminin EGF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   2.5   7.3e-05      0.33       7      35 ..     133     172 ..     130     178 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.3e-05
                  TBCCSSEET.........TTECES.BT.TTEESTTS-EE- CS
  Laminin_EGF   7 gsssssCds.........stgqCl.Ck.enveGrkCdrCk 35 
                   ++++ C+s         ++g+C  C  ++  G++Cd+C 
   KHJ34555.1 133 TTKQPYCEShgkfladrfVEGTCPkCAdKGARGDQCDKCG 172
                  5566788888888888889*******725899*******6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (624 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1365  (0.0761336); expected 358.6 (0.02)
Passed bias filter:                      842  (0.046963); expected 358.6 (0.02)
Passed Vit filter:                        77  (0.00429472); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.73u 0.27s 00:00:01.00 Elapsed: 00:00:00.43
# Mc/sec: 4365.48
//
Query:       KHJ34556.1  [L=436]
Description: putative rna binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-17   63.1   1.7    1.9e-10   40.4   0.1    3.8  3  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
    0.00013   22.0   0.1      0.029   14.5   0.0    3.0  2  RRM_7     RNA recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.0    0.0013        12       1      25 [.     144     168 ..     144     175 .. 0.85
   2 !   13.9   0.1   3.9e-06     0.035      36      69 ..     198     230 ..     186     231 .. 0.89
   3 !   40.4   0.1   2.1e-14   1.9e-10       1      57 [.     260     317 ..     260     326 .. 0.95

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0013
                 EEEESETTTSSHHHHHHHHHTTSCE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpi 25 
                 +++gnL++ v+ +++++++ +  +i
  KHJ34556.1 144 IWIGNLSYQVSTDDIHKFLVDNSEI 168
                 79**************998766555 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 3.9e-06
                 TSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1  36 gkskgfafVeFeskedAekAlealngkklggrel 69 
                  ++kgfa+V+F s e+ + A++ l +k l gr++
  KHJ34556.1 198 VTNKGFAYVDFSSAEAVNLAVK-LSEKLLFGRRV 230
                 468*******************.***99999986 PP

  == domain 3  score: 40.4 bits;  conditional E-value: 2.1e-14
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHH CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAle 57 
                 +f+gnL++d+te  Lke+F+ +G ik++k+ +    gk kgfa + Fe   +A++A++
  KHJ34556.1 260 IFLGNLSFDTTEGILKEHFERCGAIKTLKVATFeDSGKCKGFAWIVFEEIQAAKNAVR 317
                 89******************************99**********************98 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.2   0.0    0.0051        46      36      67 ..     187     218 ..     144     226 .. 0.77
   2 !   14.5   0.0   3.3e-06     0.029       1      68 [.     257     317 ..     257     346 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0051
       RRM_7  36 aeskkkaaenskaakgyvflvfedeksvkaLl 67 
                 ++++++++e++ ++kg++++ f++ ++v+  +
  KHJ34556.1 187 TQKAAEKNEKKVTNKGFAYVDFSSAEAVNLAV 218
                 344444455677889***********998766 PP

  == domain 2  score: 14.5 bits;  conditional E-value: 3.3e-06
       RRM_7   1 srkvFvGGlPiDiteeelkatfkefgkvlvdwPkkaeskkkaaenskaakgyvflvfedeksvkaLle 68 
                 s+k+F+G l  D te  lk+ f++ g+++       +  +++++ s   kg++++vfe+ ++ k+ ++
  KHJ34556.1 257 SKKIFLGNLSFDTTEGILKEHFERCGAIKTL-----KV-ATFED-SGKCKGFAWIVFEEIQAAKNAVR 317
                 89************************98642.....22.23332.33358********9998887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (436 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1017  (0.0567237); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.27s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3015.08
//
Query:       KHJ34557.1  [L=355]
Description: hypothetical protein EV44_g1230 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.6e-50  171.2   2.3    1.3e-49  170.0   2.3    1.6  1  Ino80_Iec3  IEC3 subunit of the Ino80 complex, chromatin re-m


Domain annotation for each model (and alignments):
>> Ino80_Iec3  IEC3 subunit of the Ino80 complex, chromatin re-modelling
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.0   2.3   7.4e-54   1.3e-49       5     237 .]      23     238 ..      20     238 .. 0.81

  Alignments for each domain:
  == domain 1  score: 170.0 bits;  conditional E-value: 7.4e-54
  Ino80_Iec3   5 kKYrKlrvkFeekmkesesLikeeqkiedlskRLaeenDqLLdlLldlNnsaqipsslRydLslpsvpsllspeeaaipsleadakgae.aklkeakee 102
                 kK+rK+++kF+e+m+++++L+ +eq+ ++++kR+a +nDq+Ld+L d+Nns +ip+++R+dL+++s      p  ++ip+l  +++  + ++l+  + +
  KHJ34557.1  23 KKFRKMKIKFDEAMQQNKELFFDEQRGIQTAKRIALQNDQILDILYDMNNSSRIPAEKRIDLTAES------PYLSEIPTLVSSHELSKvSQLQTPEGK 115
                 9**************************************************************999......444445555555555555666666555 PP

  Ino80_Iec3 103 laageitaedlreleeslkkskafapkkslasLlskvphtslea....peslkdlevgedkeeplgylspeeedeyllalDaklgdeslatstaaaqlr 197
                    +ei +     ++++  ++   a +ksla Ll+ +ph   ++    ++ l +le++e +++p +y++ ++ de+++++D +lg+++           
  KHJ34557.1 116 KLYDEICN----MIAARELSKPPRATQKSLALLLASIPHLDSKNphlpEDVLISLEPEEGQKTPYSYITSDQLDEFYHEIDTSLGETP----------- 199
                 55555555....333333344566788*************999944543444445555559************************999........... PP

  Ino80_Iec3 198 rasekpslaererelelrNpvSvyNWLrkhqPkvFLqdne 237
                  +  +p+++e+ +++ + N +S yNWLr++ P++FLqd+e
  KHJ34557.1 200 -ITLRPPTQETSQDSVFENFHSPYNWLRRNVPQIFLQDGE 238
                 .33355558999**************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       745  (0.0415528); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2602.99
//
Query:       KHJ34558.1  [L=655]
Description: putative ccr4-not transcription subunit 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-89  299.0  20.8      2e-89  299.0  20.8    2.5  3  Not3          Not1 N-terminal domain, CCR4-Not complex compon
    1.9e-41  141.2  11.3    1.9e-41  141.2  11.3    2.1  2  NOT2_3_5      NOT2 / NOT3 / NOT5 family
  ------ inclusion threshold ------
      0.011   16.0   2.2      0.011   16.0   2.2    3.6  2  ABC_tran_CTD  ABC transporter C-terminal domain
       0.04   13.8   4.0      0.099   12.5   4.0    1.7  1  DUF2373       Uncharacterised conserved protein (DUF2373)
        0.2   11.5   7.1        1.4    8.7   7.1    2.6  1  Sec5          Exocyst complex component Sec5
        0.2   12.1  10.5       0.36   11.3   1.5    3.7  3  Cep57_MT_bd   Centrosome microtubule-binding domain of Cep57
       0.59   10.2   5.2       0.37   10.9   0.5    3.0  3  DUF1192       Protein of unknown function (DUF1192)
       0.74   10.0   8.2       0.18   11.9   1.3    3.3  3  HR1           Hr1 repeat
        3.3    7.0   8.4        0.3   10.3   0.7    2.7  3  CorA          CorA-like Mg2+ transporter protein


Domain annotation for each model (and alignments):
>> Not3  Not1 N-terminal domain, CCR4-Not complex component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  299.0  20.8   9.9e-93     2e-89       2     231 .]       3     231 ..       2     231 .. 0.97
   2 ?   -0.9   0.9      0.47   9.3e+02     114     190 ..     411     485 ..     400     493 .. 0.54
   3 ?   -1.7   0.0      0.79   1.6e+03      17      40 ..     496     519 ..     481     526 .. 0.79

  Alignments for each domain:
  == domain 1  score: 299.0 bits;  conditional E-value: 9.9e-93
        Not3   2 krklqqeidktlkkvaegveeFdeiyeklesaenqsqkeKleadLKkeikKLqrlRdqiktwlssneikdkkkLlenrkliEeamerFkavEkesKtKa 100
                 +rklqqe+dk++kkv egv+eF++iyek+e+++n+ qkeKle++LK+eikKLqrlRdqiktw++sn+ik+k +LlenrkliE++merFkavEk++KtKa
  KHJ34558.1   3 ARKLQQEVDKCFKKVLEGVAEFESIYEKIEQSTNAAQKEKLEDNLKREIKKLQRLRDQIKTWAASNDIKNKGPLLENRKLIETQMERFKAVEKAMKTKA 101
                 7************************************************************************************************** PP

        Not3 101 fSkeglakaaaekldpkekekeearewlkdaideLneqvekleaeieklsskkkkkkkskeka.rveeleklierhkfhieklelllrlleneelepee 198
                 +Skegl+  aa k+dpke++k++a+++l +++deL++q+e+leae e ++++++k k++ +ka r++e+e+++erhk+h+ klel+ r len+ +e+e+
  KHJ34558.1 102 YSKEGLS--AAIKQDPKERAKMDACDFLGNMVDELERQIETLEAEGEAIQATMRKGKNHPSKAdRMAEIERITERHKWHQGKLELIKRSLENGGVETEQ 198
                 *******..66678*******************************************9666667*********************************** PP

        Not3 199 vekikedieyyvesnqdedfeedeelYddlnld 231
                 v++++e+i+yyv++  +edf+ed+e+Yddlnl+
  KHJ34558.1 199 VNDLEESIRYYVSDGMNEDFMEDDEMYDDLNLQ 231
                 ******************************985 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.47
        Not3 114 ldpkekekeearewlkdaideLneqvekleaeieklsskkkkkkkskekarveeleklierhkfhieklelllrlle 190
                 l+pk+ +++  ++ +k ++ + + +v + e  + ++s++++++  +  k++ +e++k++++++   +  +++ r l+
  KHJ34558.1 411 LHPKSPSQSPFSTIVKASTVSQQANVSRAENACRSTSQSQSNE--TPVKSESTEMSKTTRSKTSPKNDTSTIARELD 485
                 4566666666666666665555555555555555554444333..34444555555555555555555555555555 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.79
        Not3  17 aegveeFdeiyeklesaenqsqke 40 
                 ++ +++F+ + ++++++ +qs k 
  KHJ34558.1 496 QDLLQSFEATQRRVSNTISQSSKR 519
                 778899999999999998888775 PP

>> NOT2_3_5  NOT2 / NOT3 / NOT5 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2       2.4   4.8e+03      15      15 ..     445     445 ..     397     491 .. 0.56
   2 !  141.2  11.3   9.5e-45   1.9e-41       2     131 .]     524     651 ..     523     651 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.4
    NOT2_3_5  15 p 15 
                  
  KHJ34558.1 445 S 445
                 1 PP

  == domain 2  score: 141.2 bits;  conditional E-value: 9.5e-45
    NOT2_3_5   2 sllnspdsedaekprqyepklphptsisypqeplyeklesakklekldedtLFyiFYysqgtleqllAakeLkkrsWryhkelktWflreekeepkekt 100
                 sl ++p+++d+ +p+  +p++p  t+++ypq    +++e++++++++d dtLFy+FYy+q+t++q+lAak+Lk++sWr+hk+++tWf+r+  eepk++t
  KHJ34558.1 524 SLNSCPETLDSLSPQYLRPQNPIRTPSYYPQII-DPIFEDPRLYSRIDPDTLFYVFYYKQETYQQYLAAKALKDQSWRFHKQYQTWFQRH--EEPKTIT 619
                 5789**********999************9985.799*****************************************************..******* PP

    NOT2_3_5 101 eeyekgsYkyFDye.tWlkrrkkdfkleyekL 131
                 ee+e+g+Y++FDye tW++rrk dfk+ y+ L
  KHJ34558.1 620 EEFEQGTYRFFDYEsTWMNRRKADFKFAYKFL 651
                 *****************************976 PP

>> ABC_tran_CTD  ABC transporter C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.9   8.4         9   1.8e+04      38      49 ..      38      49 ..       3     121 .. 0.63
   2 ?   16.0   2.2   5.3e-06     0.011      11      52 ..     132     170 ..     112     176 .. 0.75

  Alignments for each domain:
  == domain 1  score: -5.9 bits;  conditional E-value: 9
  ABC_tran_CTD 38 sdpeklaelsae 49
                  ++ ekl +  ++
    KHJ34558.1 38 AQKEKLEDNLKR 49
                  222332222222 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 5.3e-06
  ABC_tran_CTD  11 eeleaeIeaLEeeiaeleaeladpelysdpeklaelsaelee 52 
                   +ele++Ie LE+e ++++a + +          a+ +ae+e+
    KHJ34558.1 132 DELERQIETLEAEGEAIQATMRKGKNH---PSKADRMAEIER 170
                   68********************99744...333444444444 PP

>> DUF2373  Uncharacterised conserved protein (DUF2373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   4.0     5e-05     0.099       2      43 ..     588     628 ..     585     646 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 5e-05
     DUF2373   2 YLiqfykdrsnWKFsKqkQnwLlkhlfdaeeipseyfellle 43 
                 YL    ++ ++W+F Kq Q+w ++h  + + i +e ++  ++
  KHJ34558.1 588 YLAAKALKDQSWRFHKQYQTWFQRHE-EPKTITEEFEQGTYR 628
                 77777889999*************97.777777777665555 PP

>> Sec5  Exocyst complex component Sec5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   7.1   0.00069       1.4       3      55 ..       5      57 ..       3     176 .. 0.93

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00069
        Sec5  3 elkslvksnftkfvkvkdtldqiykefseskteaqedslveeLeeslneairk 55
                +l++ v++ f+k+++  ++ ++iy+++++s+++aq++ l ++L+ ++++++r 
  KHJ34558.1  5 KLQQEVDKCFKKVLEGVAEFESIYEKIEQSTNAAQKEKLEDNLKREIKKLQRL 57
                78999********************************8888999888887765 PP

>> Cep57_MT_bd  Centrosome microtubule-binding domain of Cep57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   1.5   0.00018      0.36      32      72 ..      22      62 ..       6      64 .. 0.95
   2 ?    4.0   0.3     0.033        67       2      62 ..     116     173 ..     115     179 .. 0.84
   3 ?    0.3   0.1      0.51     1e+03       2      54 ..     466     522 ..     465     538 .. 0.65

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00018
  Cep57_MT_bd 32 qelaaqynaldpslgkrkRkdLaeeleelvkrlEaKadqIy 72
                 +e+++ y++ ++s++ +++++L+ +l++ +k+l +  dqI+
   KHJ34558.1 22 AEFESIYEKIEQSTNAAQKEKLEDNLKREIKKLQRLRDQIK 62
                 688999**********************************7 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.033
  Cep57_MT_bd   2 tlrpsqspkeaLaevlkeLedEfehlklelqelaaqynaldpslgkrkRkdLaeeleelvk 62 
                  ++r +++ ++ L   + eLe ++e l +e +  +a++++     ++ ++ d ++e+e++++
   KHJ34558.1 116 KERAKMDACDFLGNMVDELERQIETLEAEGEAIQATMRKGK---NHPSKADRMAEIERITE 173
                  678889999999999**********************9999...77777777777776665 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.51
  Cep57_MT_bd   2 tlrpsqspkeaLaevlkeLedEfehlklelqelaaqynaldpsl....gkrkRkdLa 54 
                  t r++ spk++ +++ +eL + +  l   lq+l + ++a++ ++    ++++++ La
   KHJ34558.1 466 TTRSKTSPKNDTSTIARELDESIFYLPSGLQDLLQSFEATQRRVsntiSQSSKRMLA 522
                  778888888888888888888887777777777777777775543333444444444 PP

>> DUF1192  Protein of unknown function (DUF1192)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0         1     2e+03      32      44 ..      47      59 ..      45      69 .. 0.68
   2 ?   10.9   0.5   0.00019      0.37      22      54 ..     131     163 ..     127     165 .. 0.93
   3 ?   -2.0   0.1       1.9   3.8e+03      34      41 ..     166     173 ..     162     178 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1
     DUF1192 32 LeaEIaRleaaia 44
                L+ EI++l++ ++
  KHJ34558.1 47 LKREIKKLQRLRD 59
                8899987766554 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00019
     DUF1192  22 veELeerIalLeaEIaRleaaiakkkasraAAe 54 
                 v+ELe  I++LeaE + ++a+++k k++ + A+
  KHJ34558.1 131 VDELERQIETLEAEGEAIQATMRKGKNHPSKAD 163
                 8***********************999998887 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 1.9
     DUF1192  34 aEIaRlea 41 
                 aEI+R+ +
  KHJ34558.1 166 AEIERITE 173
                 8****976 PP

>> HR1  Hr1 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   1.3   9.1e-05      0.18      14      65 ..      16      68 ..      14      71 .. 0.89
   2 ?   -0.1   0.2       0.5     1e+03      50      63 ..     130     143 ..      91     149 .. 0.79
   3 ?   -0.5   0.4       0.7   1.4e+03      51      63 ..     131     143 ..     129     191 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 9.1e-05
         HR1 14 kireGAenllralesk.ktqnkkvrqeaeselsesnskielLreqLeelqasv 65
                k+ eG     + +e+  +++n  ++++ e +l+   +k++ Lr+q+++  as+
  KHJ34558.1 16 KVLEGVAEFESIYEKIeQSTNAAQKEKLEDNLKREIKKLQRLRDQIKTWAASN 68
                77788888888899888******************************988876 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.5
         HR1  50 kielLreqLeelqa 63 
                  +++L++q+e+l+a
  KHJ34558.1 130 MVDELERQIETLEA 143
                 57899999999987 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.7
         HR1  51 ielLreqLeelqa 63 
                 +++L++q+e+l+a
  KHJ34558.1 131 VDELERQIETLEA 143
                 5666666666665 PP

>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.5      0.24   4.7e+02     122     167 ..      23      61 ..       3     108 .. 0.50
   2 ?   10.3   0.7   0.00015       0.3     115     179 ..     126     190 ..     109     233 .. 0.79
   3 ?   -1.3   0.0      0.55   1.1e+03     102     147 ..     470     519 ..     452     537 .. 0.47

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.24
        CorA 122 rlfellekleeeldeledeledstkkeilrelaqlrrrlvklrral 167
                 +++ + ek+e+ ++ +++e  +++ k ++++l +lr +       +
  KHJ34558.1  23 EFESIYEKIEQSTNAAQKEKLEDNLKREIKKLQRLRDQ-------I 61 
                 23333333333333333333333333333333333322.......2 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00015
        CorA 115 lldeivdrlfellekleeeldeledel.edstkkeilrelaqlrrrlvklrralapnrevlkrlla 179
                 +l  +vd+l++++e+le+e + ++ ++ + +++ + ++++a+++r  ++ +++   + e++kr l+
  KHJ34558.1 126 FLGNMVDELERQIETLEAEGEAIQATMrKGKNHPSKADRMAEIERI-TERHKWHQGKLELIKRSLE 190
                 78899**********************8888888899999998775.4556666666666655555 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.55
        CorA 102 ggkpkspgellyrlldeivdrlfellekleeeldeledel....edstkk 147
                 +  pk+ ++ ++r lde + +l   l++l +  +  ++++    ++s+k+
  KHJ34558.1 470 KTSPKNDTSTIARELDESIFYLPSGLQDLLQSFEATQRRVsntiSQSSKR 519
                 33333344444444444443333333333333333333331111444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (655 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2472  (0.137877); expected 358.6 (0.02)
Passed bias filter:                      633  (0.0353059); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.84u 0.30s 00:00:01.13 Elapsed: 00:00:00.45
# Mc/sec: 4411.27
//
Query:       KHJ34559.1  [L=829]
Description: putative zz type zinc finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      3e-26   92.1   0.0      7e-26   90.9   0.0    1.7  1  N_BRCA1_IG   Ig-like domain from next to BRCA1 gene
    3.4e-18   65.2  59.8    4.8e-06   26.3   7.1    4.6  4  ZZ           Zinc finger, ZZ type
    1.4e-05   25.3  43.6     0.0022   18.3   3.1    4.8  4  C1_2         C1 domain
  ------ inclusion threshold ------
       0.01   15.8   3.7       0.01   15.8   3.7    3.8  4  Baculo_IE-1  Baculovirus immediate-early protein (IE-0)


Domain annotation for each model (and alignments):
>> N_BRCA1_IG  Ig-like domain from next to BRCA1 gene
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.9   0.0   1.6e-29     7e-26       2     102 .]     628     740 ..     627     740 .. 0.91

  Alignments for each domain:
  == domain 1  score: 90.9 bits;  conditional E-value: 1.6e-29
  N_BRCA1_IG   2 ipdgtvvppgteftktWrlrNtGseaWpagtklvfvgGdkmg.s...........asaeessvsvpavapgeevevsvelkaPskpgryisywrlated 88 
                 i dgt + p+  f++tW lrN G+++Wp+g++++fv+G++m+ +           + +++s    ++vapge+v ++v l++P +pg+yis wrl  +d
  KHJ34559.1 628 IIDGTIMLPNVSFEQTWYLRNAGKNSWPSGCYIKFVSGTNMCfVenkclestpeqTLTSRSIALNSEVAPGETVGFTVLLRTPCSPGNYISFWRLIAPD 726
                 78***************************************9669****998875343444555888******************************** PP

  N_BRCA1_IG  89 gseFGdrlwvdieV 102
                     G +lw++i+V
  KHJ34559.1 727 DRVVGPKLWCEINV 740
                 ************98 PP

>> ZZ  Zinc finger, ZZ type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5  10.6     6e-07    0.0027       5      43 ..     258     299 ..     256     300 .. 0.86
   2 !   18.0  10.6     4e-07    0.0018       6      44 ..     343     380 ..     339     381 .. 0.87
   3 !   26.3   7.1   1.1e-09   4.8e-06       3      42 ..     410     449 ..     408     452 .. 0.90
   4 !   21.3   7.5   3.9e-08   0.00018      10      43 ..     486     520 ..     475     522 .. 0.71

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 6e-07
                 EE-TTT-S..EESSEEEESSSS..S-EE-HHHHHH...H---S CS
          ZZ   5 ytCdgCseapligvRyhclrcs..dYDLCqsCfst..hkagkh 43 
                 ++C+ C +  + g  yhc  c+  d+DLCq C +   + +g+h
  KHJ34559.1 258 VICNNCNS-LISGEHYHCSNCDggDFDLCQACINNgtSCYGEH 299
                 79******.999*********888********98755666666 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 4e-07
                 E-TTT-S..EESSEEEESSSSS-EE-HHHHHH.H---SS CS
          ZZ   6 tCdgCseapligvRyhclrcsdYDLCqsCfsthkagkhk 44 
                 tC+ C +  +    + c+ c dYDLC+sC      ++h 
  KHJ34559.1 343 TCNCCIAELTEDQFVTCTTCTDYDLCISCHVN-LNHGHH 380
                 8******88999999***************99.555553 PP

  == domain 3  score: 26.3 bits;  conditional E-value: 1.1e-09
                 S-EE-TTT-S..EESSEEEESSSSS-EE-HHHHHH..H--- CS
          ZZ   3 kkytCdgCseapligvRyhclrcsdYDLCqsCfst.hkagk 42 
                 + +tCdgC +  + g R +cl c+d+D C+ C    +++++
  KHJ34559.1 410 HSATCDGCDK-VIYGIRHKCLDCPDWDYCSTCIVDaKTSHP 449
                 789*******.9********************999877775 PP

  == domain 4  score: 21.3 bits;  conditional E-value: 3.9e-08
                 T-S....EESSEEEESSSSS-EE-HHHHHH.H---S CS
          ZZ  10 Csea..pligvRyhclrcsdYDLCqsCfsthkagkh 43 
                 C++    + g Ry+c++c+d+D C +C+ + ++  h
  KHJ34559.1 486 CKNIssYIKGDRYKCTICDDTDFCARCEAS-TQNIH 520
                 66531146789*****************99.55444 PP

>> C1_2  C1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   3.1   4.9e-07    0.0022      19      47 .]     258     289 ..     222     289 .. 0.90
   2 !    6.5   9.1    0.0023        10      15      46 ..     338     371 ..     325     372 .. 0.84
   3 !   11.5   2.1   6.5e-05      0.29      11      47 .]     404     441 ..     380     441 .. 0.87
   4 !    6.5   5.8    0.0023        10      20      46 ..     480     512 ..     447     513 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 4.9e-07
        C1_2  19 fnCsaCgrkidgffYsCseCd...fslhvrCa 47 
                   C+ C   i+g++Y+Cs Cd   f l++ C+
  KHJ34559.1 258 VICNNCNSLISGEHYHCSNCDggdFDLCQACI 289
                 57******************6667*******6 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0023
        C1_2  15 ssesfnCsaCgrk.idgffYsCseC.dfslhvrC 46 
                 + e ++C++C  + +++ f +C++C d+ l+++C
  KHJ34559.1 338 EMEIRTCNCCIAElTEDQFVTCTTCtDYDLCISC 371
                 556799*******5555559*****99******* PP

  == domain 3  score: 11.5 bits;  conditional E-value: 6.5e-05
        C1_2  11 kgedssesfnCsaCgrkidgffYsCseC.dfslhvrCa 47 
                  g++ + s +C++C++ i g + +C  C d   +++C+
  KHJ34559.1 404 PGRNVEHSATCDGCDKVIYGIRHKCLDCpDWDYCSTCI 441
                 567889999*******************99******96 PP

  == domain 4  score: 6.5 bits;  conditional E-value: 0.0023
        C1_2  20 nCsa..Cgrk...idgffYsCseC.dfslhvrC 46 
                  C++  C++    i+g++Y+C++C d  ++ rC
  KHJ34559.1 480 FCDGphCKNIssyIKGDRYKCTICdDTDFCARC 512
                 576666888877788888******669999999 PP

>> Baculo_IE-1  Baculovirus immediate-early protein (IE-0)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   4.0       1.8   8.2e+03      83     113 ..     260     291 ..     236     295 .. 0.80
   2 ?   15.8   3.7   2.3e-06      0.01      75     116 ..     336     377 ..     311     397 .. 0.83
   3 ?   -0.3   1.1      0.22   9.7e+02      78      90 ..     495     507 ..     485     512 .. 0.78
   4 ?   -2.7   0.0       1.2   5.3e+03      20      44 ..     659     683 ..     655     693 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.8
  Baculo_IE-1  83 cnicedtsaeerflkPneccG..ykicnlcyan 113
                  cn c+   + e++   n c G  + +c++c  n
   KHJ34559.1 260 CNNCNSLISGEHYHCSN-CDGgdFDLCQACINN 291
                  99999888888886655.5443699****9765 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 2.3e-06
  Baculo_IE-1  75 flekklyqcnicedtsaeerflkPneccGykicnlcyanlwk 116
                   +e+++  cn c    +e++f+   +c  y +c  c++nl +
   KHJ34559.1 336 KNEMEIRTCNCCIAELTEDQFVTCTTCTDYDLCISCHVNLNH 377
                  4577999********************************964 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.22
  Baculo_IE-1  78 kklyqcnicedts 90 
                     y+c ic+dt 
   KHJ34559.1 495 GDRYKCTICDDTD 507
                  566********95 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 1.2
  Baculo_IE-1  20 ylkqlrkilklfvndycckklvkkl 44 
                  y+k +   +  fv+++c +++ +++
   KHJ34559.1 659 YIKFVSGTNMCFVENKCLESTPEQT 683
                  8999999999999999998876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (829 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1126  (0.0628033); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.24s 00:00:00.88 Elapsed: 00:00:00.38
# Mc/sec: 6518.15
//
Query:       KHJ34560.1  [L=285]
Description: putative 3-oxoacyl-(acyl-carrier-protein) reductase 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.8e-48  163.2   0.6    5.8e-48  163.0   0.6    1.1  1  adh_short     short chain dehydrogenase
    1.3e-46  159.1   0.7    1.8e-40  139.0   0.2    2.0  2  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
    7.2e-19   68.4   0.1      1e-18   67.9   0.1    1.1  1  KR            KR domain
    0.00011   21.7   0.1    0.00036   20.1   0.1    1.8  1  Epimerase     NAD dependent epimerase/dehydratase family


Domain annotation for each model (and alignments):
>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.0   0.6   1.3e-51   5.8e-48       1     192 [.      14     210 ..      14     213 .. 0.93

  Alignments for each domain:
  == domain 1  score: 163.0 bits;  conditional E-value: 1.3e-51
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHH...HHHHHHHHHHT.TSEEEEEE-TTTSHHHHHHHHHHHHHHH..SSESEEEE---SS--SSG CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrseek...leevakelkee.gakalaiqvDvtdreevealvekavkkl..gkldvLvnNAGitgsgpf 93 
                 k++lvtGas+GIG aia++la++Gak+++   s++    +  +a++l+e  g + l++q+D+ + +  ++++++a++k+   +ld+++nNAG+ ++++ 
  KHJ34560.1  14 KIALVTGASRGIGAAIAQNLASKGAKIILNYTSPSSsqiCIDLATKLQESyGVEHLVVQADMGSLNGPSDIIKTAAAKIpnLRLDIIINNAGVLKVAKL 112
                 79***************************554444401145778899999*****************************88899*************** PP

                 GGCSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHHHCT CS
   adh_short  94 selseeewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmakelre 192
                 ++++ e++e+v++vN+ g++ll++a++p++ + +sGrIvnvsSv +  +  ++++Y+ sKaa++++tr++++ela++  +vn+++PG+v Tdm+k++ +
  KHJ34560.1 113 ADTTVEDFEKVYSVNVRGPLLLVKAAIPYLPNDRSGRIVNVSSVSATFGGVEQSVYGGSKAALDAMTRTWSRELADH-ATVNSINPGPVLTDMMKSAMN 210
                 ****************************************************************************9.9***************98765 PP

>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.0   0.2   3.9e-44   1.8e-40       1     191 [.      20     216 ..      20     231 .. 0.88
   2 !   19.2   0.0   1.6e-07   0.00071     194     233 ..     242     281 ..     217     282 .. 0.85

  Alignments for each domain:
  == domain 1  score: 139.0 bits;  conditional E-value: 3.9e-44
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGHH....HHHHHHHHHTTSE..EEE--TTSHHHHHHHHHHHHHHH..SSEEEEEE-----EGCSS-GGG CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneeak....krveelaeelgae..vlecDVtdeeqvealveevvekf..gklDilvnnagiapklkgpfle 89 
                   Ga +gIG+aiA+ la++Ga+++l + + ++     + +++l+e++g e  v+++D  + +   ++++++++k+   +lDi++nnag+ +   +++++
    KHJ34560.1  20 GASRGIGAAIAQNLASKGAKIILNYTSPSSSqiciDLATKLQESYGVEhlVVQADMGSLNGPSDIIKTAAAKIpnLRLDIIINNAGVLKV--AKLAD 114
                   999*************************99612224455555556644455**********************8789*************..***** PP

                   H-HHHHHHHHHHHTHHHHHHHHHHHHHCTSC..CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTT CS
  adh_short_C2  90 tsreefdraldvnlyslfllakaalplmkeg..gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikg 184
                   t+ e+f+++ +vn+++ +ll+kaa+p++ +   g+ivn+ssv+a+ +  ++++yg +Kaal a+tr++ +el++   +vN++ pgp+ T++++++  
    KHJ34560.1 115 TTVEDFEKVYSVNVRGPLLLVKAAIPYLPNDrsGRIVNVSSVSATFGGVEQSVYGGSKAALDAMTRTWSRELAD-HATVNSINPGPVLTDMMKSAM- 209
                   **************************7776669****************************************9.89**************98876. PP

                   HHHHHHH CS
  adh_short_C2 185 fdellee 191
                   + el++e
    KHJ34560.1 210 NTELRDE 216
                   4455554 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 1.6e-07
                   HHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTG CS
  adh_short_C2 194 araplgrlgtpeevaeaalfLasdeasyitGqtlvvDgGl 233
                   a++  gr + +ee+a ++ +L+s e+ ++tGq++ ++gGl
    KHJ34560.1 242 AKILGGRPAYAEEIAGIVGMLVSSESGWCTGQVICANGGL 281
                   466778999******************************7 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.9   0.1   2.3e-22     1e-18       4     171 ..      17     190 ..      15     201 .. 0.85

  Alignments for each domain:
  == domain 1  score: 67.9 bits;  conditional E-value: 2.3e-22
                 EEETTTSHHHHHHHHHHHHHHS-EEE.EE-SS..--HHHHHHHHHHHHT.T-EEEE----TT-HHHHHHHHHHHHHHS..S---EEEE---------TT CS
          KR   4 litGGlGgLGlelarwlaekgarhlv.llsRsaaadedskaliaeleal.gaevevvaaDvsdkdavealleeikaee..ppikGvihaAgvlrdklle 98 
                 l+tG+  g+G ++a+ la+kga+ ++ ++s s  +++   +l ++l+++ g+e  vv+aD  + +  + +++++ a+    ++  +i+ Agvl+ ++l+
  KHJ34560.1  17 LVTGASRGIGAAIAQNLASKGAKIILnYTSPS--SSQICIDLATKLQESyGVEHLVVQADMGSLNGPSDIIKTAAAKIpnLRLDIIINNAGVLKVAKLA 113
                 9********************99776244445..7788888999999877************************99993334568************** PP

                 T--HHHHHHHHTTTTHHHHHHHHHTTT....S--SEEEEEEEHHHHH--TT-HHHHHHHHHHHHHHHHHHHHHHTEE CS
          KR  99 emtaedleqvlapKvkGawnLhelled....esldffvlfSSiagllgsagqanYaaaNaflDalaeyrrsqglpav 171
                 ++t ed+e+v++  v+G   L ++  +    ++   +v +SS+++++g  +q+ Y    a lDa+ ++++++ +   
  KHJ34560.1 114 DTTVEDFEKVYSVNVRGPLLLVKAAIPylpnDRSGRIVNVSSVSATFGGVEQSVYGGSKAALDAMTRTWSRELADHA 190
                 *******************99987655455488889******************************99987655522 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.1   8.1e-08   0.00036       1     159 [.      16     185 ..      16     197 .. 0.72

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 8.1e-08
                 EEEETTTSHHHHHHHHHHHHCTSE.EEEEES-STTTTCHHCHHC............EEEE--TT-HHHHHHHHH....HHT-SEEEE--S---H....H CS
   Epimerase   1 ilVtGatGfiGsalvkallekgye.vigldrlssasntarledl............elveldltdrsalerlfk....eeqpdavihlAavggv....a 78 
                 +lVtGa+  iG+a++++l++kg + +++ ++ ss++    l+++            +   + l  +s++ +  +    + + d++i+ A+v  v    +
  KHJ34560.1  16 ALVTGASRGIGAAIAQNLASKGAKiILNYTSPSSSQICIDLATKlqesygvehlvvQADMGSLNGPSDIIKTAAakipNLRLDIIINNAGVLKVaklaD 114
                 59********************99677777776666666555558*******965544444444455444443311114599*******9666612224 PP

                 HHHHSHHHHHHHHTHHHHHHHHHHHHHTCT....EEEEEEE.GGGGTSCSSSSBSTCSTTS----SSHHHHHHHHHHHHHHHHHHH CS
   Epimerase  79 assedpadfieknlqgtlnlleaarkagvk....rllflsS.sevYGkdaeqpkeettltgplkpnspYaaaKlageklveayaaq 159
                 +++ed ++++  n++g l l++aa  + ++    r++++sS s+++G +++               s Y+ +K+a + +++ + ++
  KHJ34560.1 115 TTVEDFEKVYSVNVRGPLLLVKAAIPYLPNdrsgRIVNVSSvSATFGGVEQ---------------SVYGGSKAALDAMTRTWSRE 185
                 67888889999*************9773333456*******8899997666...............46777777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 2278.59
//
Query:       KHJ34561.1  [L=350]
Description: hypothetical protein EV44_g4000 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2582.68
//
Query:       KHJ34562.1  [L=653]
Description: putative arm-like repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.014   15.5   0.1      0.048   13.8   0.1    1.9  1  DUF5333   Family of unknown function (DUF5333)
      0.036   14.2   0.7        2.7    8.2   0.0    3.4  3  RTP1_C1   Required for nuclear transport of RNA pol II C-term
       0.13   12.6   1.5        2.5    8.5   0.7    2.8  2  DUF3510   Domain of unknown function (DUF3510)


Domain annotation for each model (and alignments):
>> DUF5333  Family of unknown function (DUF5333)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1     8e-06     0.048      25      92 ..      43     111 ..      29     122 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 8e-06
     DUF5333  25 eCdsisarllkalseleslkakarelGYseaeiea.yvddkaekarlraeaeaylaakGvkagdeeslC 92 
                 +C+++s+r     s l+ ++++   +G  +++i + ++++  + ++l+a+a+ +   +G+ +++e+++C
  KHJ34562.1  43 QCSDLSIRSAATQSALKLIQDQKLRKGLLREQIVKiLLEQTINDSDLQAKADGWSILRGLAKEEEADFC 111
                 8*****************************99866157888999************************* PP

>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.5    0.0045        27       5      53 ..      39      88 ..      37      88 .. 0.91
   2 ?    8.2   0.0   0.00046       2.7       6      54 ..      82     139 ..      80     140 .. 0.94
   3 ?   -3.4   0.0       1.8   1.1e+04      92     109 ..     542     559 ..     538     561 .. 0.82

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0045
     RTP1_C1  5 lkdlqdpllpvrahglvlLrkliekkskeavldiekilkllle.aLkded 53
                ++dlq + l +r+ + ++  kli++++  + l  e+i+k+lle +++d+d
  KHJ34562.1 39 IRDLQCSDLSIRSAATQSALKLIQDQKLRKGLLREQIVKILLEqTINDSD 88
                68999999*********************************985677776 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00046
     RTP1_C1   6 kdlqdpllpvrahglvlLrkliekkske.........avldiekilkllleaLkdeds 54 
                 + ++d+ l  +a g + Lr l+++++++          ++++++i+k+++e+Lk +d+
  KHJ34562.1  82 QTINDSDLQAKADGWSILRGLAKEEEADfcihlyrqdILEKLDEIIKTIIETLKSSDP 139
                 679**********************988********99999*************9995 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 1.8
     RTP1_C1  92 lderlkvGEaLlrvirrl 109
                 +d   k+G  Ll +++ l
  KHJ34562.1 542 IDINRKIGNFLLTIVQSL 559
                 677789******999975 PP

>> DUF3510  Domain of unknown function (DUF3510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0     0.075   4.5e+02      43      81 ..     423     462 ..     405     494 .. 0.80
   2 ?    8.5   0.7   0.00041       2.5      71     123 ..     592     651 ..     587     652 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.075
     DUF3510  43 lktfkkesekk.lseevleewlaevleevtsrYletisev 81 
                 +++++++se+  + ++v+ ++++e+ e+v+ r+l+ +++ 
  KHJ34562.1 423 VSNIDNTSEHFaVLQKVWASLAQEIWEQVICRFLDLCTDN 462
                 4444555555568899999999999999999999987765 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00041
     DUF3510  71 tsrYletisevlssvkkteesLkrlkkarkgaaas..........anggeeasDddkirlQla 123
                 t+++ + ++e+ s++kk+ +s+ r k ++ ++ a+          a    ++++++ki  Q++
  KHJ34562.1 592 TDNFCKSLEEIQSKIKKMAKSIDRRKSRELRTRADeavlnldrflA---YKKKEKTKILSQII 651
                 6889999*******************99888877788999996542...45778999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (653 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1172  (0.065369); expected 358.6 (0.02)
Passed bias filter:                      551  (0.0307323); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.22s 00:00:00.83 Elapsed: 00:00:00.37
# Mc/sec: 5226.29
//
Query:       KHJ34563.1  [L=917]
Description: putative atp-dependent rna helicase dbp10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-50  171.8   0.1      4e-50  170.0   0.0    2.0  2  DEAD        DEAD/DEAH box helicase
    3.9e-24   85.1   0.3    1.5e-21   76.8   0.1    2.8  2  Helicase_C  Helicase conserved C-terminal domain
    6.4e-20   71.2   5.1    6.4e-20   71.2   5.1    2.7  2  DBP10CT     DBP10CT (NUC160) domain
      9e-08   32.3   0.0      9e-08   32.3   0.0    2.6  3  ResIII      Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.0   0.0   8.8e-54     4e-50       1     173 [.     112     277 ..     112     280 .. 0.96
   2 ?   -2.4   0.0      0.75   3.4e+03     157     170 ..     359     372 ..     343     419 .. 0.62

  Alignments for each domain:
  == domain 1  score: 170.0 bits;  conditional E-value: 8.8e-54
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvd 99 
                 t+iQ+++iplil+ +dv++ a+TGsGKT+af+ip++q +  +  + g +ali++P+reLa qtl+ +k+f   +dl+++l++gg++ +dq + + +++d
  KHJ34563.1 112 TPIQRKTIPLILDHQDVVGMARTGSGKTAAFVIPMIQMLKAHSARVGARALILSPSRELALQTLKVVKEFSRSTDLKCVLLVGGDSLEDQFRFMAANPD 210
                 89*************************************888999*************************************************99*** PP

                 EEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 100 ivvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdv 173
                 i+++tpgr+++l  + +l+ls+v+++V+DEadrl ++gfs ++n+il++l       +++rq++++SATlp+++
  KHJ34563.1 211 IIIATPGRFLHLKIEMSLDLSSVKYVVFDEADRLFEMGFSTQLNEILHAL-------SNSRQTLLFSATLPRSL 277
                 ***********998899*********************************.......45688********9654 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.75
                 TTTSEEEEEESSBS CS
                 xxxxxxxxxxxxxx RF
        DEAD 157 klqrqvivlSATlp 170
                 + +  +iv+ AT +
  KHJ34563.1 359 PTEFSTIVFAATKH 372
                 44445666666655 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   0.0    0.0043        19      11      93 ..     153     241 ..     143     272 .. 0.76
   2 !   76.8   0.1   3.5e-25   1.5e-21      15     111 .]     360     456 ..     345     456 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.0043
                 HHTTTTSEEEEEESSHH....HHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH..TTSSSEEEESGG......GTSSSTSTTESEEEESSS CS
  Helicase_C  11 kleeeggkilifvntid....rlekvklllekkgikvavlhgelpqnereeileqfn..kgesdvLiatdv......aerGidipkvnlVinfdl 93 
                 ++ ++g ++li +++++    +l+ vk + ++ ++k++ l g           +qf+  + + d++iat        +e+++d+ +v++V++ ++
  KHJ34563.1 153 HSARVGARALILSPSRElalqTLKVVKEFSRSTDLKCVLLVGGD------SLEDQFRfmAANPDIIIATPGrflhlkIEMSLDLSSVKYVVFDEA 241
                 46788999999999999844333226666555689999999943......44444444466778*****99999999*************97555 PP

  == domain 2  score: 76.8 bits;  conditional E-value: 3.5e-25
                 TTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHHTTSSSTT CS
  Helicase_C  15 eggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqriGRtgRag 111
                  +  +++f+ t+ ++e +  +l+ +g++v + +g+l q  r+  +e+f+ g +++L+ tdva+rGidip + +Vin+d+p +++ +++r+GRt+Rag
  KHJ34563.1 360 TEFSTIVFAATKHHVEYLAEILRLSGFSVSYAYGSLDQVARNIQVENFRTGITNILVVTDVAARGIDIPILANVINYDFPSQPKVFVHRVGRTARAG 456
                 45679**********7744445677**********************************************************************97 PP

>> DBP10CT  DBP10CT (NUC160) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.63   2.8e+03      23      53 ..     345     361 ..     337     374 .. 0.53
   2 !   71.2   5.1   1.4e-23   6.4e-20       2      64 ..     747     812 ..     746     813 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.63
     DBP10CT  23 kKkkkyVkrtnkdedgskkirtESGvkiaas 53 
                 kK+k+ ++ +      s        +ki+++
  KHJ34563.1 345 KKRKRLIEHN------S--------KKIPTE 361
                 3444444422......2........344443 PP

  == domain 2  score: 71.2 bits;  conditional E-value: 1.4e-23
     DBP10CT   2 LtgDeaeelkkkkqakk...lrWDkKkkkyVkrtnkdedgsk...kirtESGvkiaasfksgrYdkWkk 64 
                 L++D++ +   +  ++k   +rWDkK+ kyV r n dedgsk   +ir+ESG+kiaasfksgr+dkW+k
  KHJ34563.1 747 LVNDDSGKS--FSDPSKakgMRWDKKNSKYVARVN-DEDGSKgarMIRSESGQKIAASFKSGRFDKWRK 812
                 899999443..66666666*************999.999986666**********************99 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3   0.0     2e-11     9e-08      30     170 ..     131     274 ..      62     275 .. 0.80
   2 ?   -2.8   0.4       1.2   5.5e+03      97     140 ..     531     575 ..     508     585 .. 0.63
   3 ?   -2.0   1.2      0.71   3.2e+03      65     113 ..     615     665 ..     604     699 .. 0.56

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 2e-11
                 EESTTSTHHHHHHHHHHHH-S........-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--........-SEEEEEHHHHHHTH...... CS
      ResIII  30 kmaTGtGKTlvaaklierllkkgkee...kflflvprkslleqtleefkkflseaykeigkkvsgdkkka.kekdstnkkilvttiqsldadseeeeee 124
                  + TG+GKT   +  + ++lk+++ +   ++l+l p+++l  qtl+ +k+f+ +++ +    v gd+ +  ++  + n +i+++t  ++   +      
  KHJ34563.1 131 MARTGSGKTAAFVIPMIQMLKAHSARvgaRALILSPSRELALQTLKVVKEFSRSTDLKCVLLVGGDSLEDqFRFMAANPDIIIATPGRFLHLK-----I 224
                 456*******9988888888877777899**************************9995555666655555555899************9999.....9 PP

                 ..HHHTTT-SEEEEETGGGTTS....TTTHHHHHT---.SEEEEEESS-S CS
      ResIII 125 seellrdrfdviiiDEaHrlgak...kswreilekfke.avllglTATpe 170
                 + +l+ ++ +++++DEa rl ++   ++ +eil ++++    l ++AT++
  KHJ34563.1 225 EMSLDLSSVKYVVFDEADRLFEMgfsTQLNEILHALSNsRQTLLFSATLP 274
                 999999****************97766999999998774667999***87 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.2
                 .......-SEEEEEHHHHHHTH.........HHHTTT-SEEEEET CS
      ResIII  97 kekdstnkkilvttiqsldadseee.eeeseellrdrfdviiiDE 140
                 ++ +++  ++++ t +s++++s ++ +e   ++  +++++++ DE
  KHJ34563.1 531 QSVAEKGERLYIKTRNSASSESVKRaKEIVSSKNWSQINMLFQDE 575
                 455566777777777777777755454444555555555666666 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.71
                 HHHHHHHHHGGGGTGG.......GEEEESSS-B--.......-SEEEEEHHH CS
      ResIII  65 slleqtleefkkflseayke...igkkvsgdkkkakekdstnkkilvttiqs 113
                 +++ q +e+ kk++++++++   i+kk++   ++    ++++k+ l++  ++
  KHJ34563.1 615 NIMRQRREKTKKTKHNYDDQnsvIQKKIEMSDDDL-LTHIDDKDQLISGADT 665
                 45566666666666666555555333333333333.3344444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (917 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       908  (0.0506442); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.68u 0.24s 00:00:00.92 Elapsed: 00:00:00.41
# Mc/sec: 6763.20
//
Query:       KHJ34564.1  [L=249]
Description: hypothetical protein EV44_g1733 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       769  (0.0428914); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2002.60
//
Query:       KHJ34565.1  [L=310]
Description: putative pre-rrna-processing protein esf2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-07   30.8   0.0    3.8e-05   23.4   0.0    2.8  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   2.1e-09   3.8e-05       1      68 [.     109     189 ..     109     191 .. 0.84

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 2.1e-09
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.............TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.............etgkskgfafVeFeskedAekAlealngkklggre 68 
                 ++++ +pp+++ ++L+ l++++G i++i l ++             ++++s   + VeF +k++A++A e ln +++gg++
  KHJ34565.1 109 VYLSRIPPYMKASKLRSLLEPYGAINRIFLTPEdpsahsrrirnggNKKRSFVDGWVEFVKKSEAKAACELLNARTIGGKK 189
                 79999**********************987665555555555435777777778999**********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1326  (0.0739584); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2405.12
//
Query:       KHJ34566.1  [L=128]
Description: hypothetical protein EV44_g5484 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (128 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      578  (0.0322383); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 972.04
//
Query:       KHJ34567.1  [L=381]
Description: hypothetical protein EV44_g2872 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-23   81.8   0.0    5.6e-23   80.6   0.0    1.6  1  TFIIIC_sub6  TFIIIC subunit triple barrel domain


Domain annotation for each model (and alignments):
>> TFIIIC_sub6  TFIIIC subunit triple barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.6   0.0   3.1e-27   5.6e-23       1      93 [.      45     213 ..      45     214 .. 0.96

  Alignments for each domain:
  == domain 1  score: 80.6 bits;  conditional E-value: 3.1e-27
                  X-EE..EEEEEESSTT----T.........................................................................T-EE CS
  TFIIIC_sub6   1 eetEtvyvtlDlsspefaera....................................................................eeeeakkdl 30 
                  +etEt+y+tlDls+pe++ ++                                                                    e+ +  k++
   KHJ34567.1  45 TETETYYLTLDLSTPEVPPTHppfddtirkktrwlnpsigrhrrqtplppanrtakiytldgrispdeneildkasedevektthtvseENDQIPKSV 142
                  79*************************************************************************************99888999*** PP

                  EEE-TTSSS-EEEETTEEEEEEEE--SSEEEEEE-S---...............--EEE-S-EEEEEEE-- CS
  TFIIIC_sub6  31 qilgLdtenPlisigdkvfeGeweeliGTelifedddda......alrklee..ellaasskrikltevkl 93 
                  qil+L+t+ P++  +++v+ ++w+e+iGTelif+ +d +      +lr+l++  +lla+s++r++ +++kl
   KHJ34567.1 143 QILDLETHLPIVAFDGHVYACSWAENIGTELIFTPTDVDnsnplpKLRTLRGnvDLLASSTARLVARSLKL 213
                  ***********************************66667889998899999*************999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       998  (0.055664); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 2995.57
//
Query:       KHJ34568.1  [L=741]
Description: putative ubiquitin fusion degradation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-29  102.5   0.0    4.3e-25   88.2   0.0    3.4  1  UFD1           Ubiquitin fusion degradation protein UFD1
    1.7e-06   28.1   0.1    1.7e-06   28.1   0.1    3.0  4  AZUL           Amino-terminal Zinc-binding domain of ubiquiti


Domain annotation for each model (and alignments):
>> UFD1  Ubiquitin fusion degradation protein UFD1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.2   0.0   4.8e-29   4.3e-25      22     171 ..      26     235 ..      14     236 .. 0.81

  Alignments for each domain:
  == domain 1  score: 88.2 bits;  conditional E-value: 4.8e-29
        UFD1  22 ggkiiLPpsaLdeLt....................................rlnieyPmlFelsnkkkkksthagVleFtaeegtvylPew........ 76 
                 g+kiiLP+saL++L                                     ++++  P++F l n+k+ k+++ag++eF+aeeg++ l+ +        
  KHJ34568.1  26 GDKIILPKSALEQLLaasssvtststqyeanfdsynqfsdinsqtskltdkNQQLPQPLTFLLVNPKNGKKVYAGIQEFSAEEGEIALSPFlfealnis 124
                 7777777777777776776777666666666666666666666666666656677899999999**************************978888888 PP

        UFD1  77 ........mmenlgleegdl......veiesvslpkgkfvklqpqsedfldisdpkavLekaLr.nfatLtkgdvieiky.ndkvyelkvlevkpes.a 158
                         m    + +e+++      +++   +lpkgkf +l+p++  + +  d+k +Lek Lr nf+tLt+g++i+++   ++v+++ + ev p+  +
  KHJ34568.1 125 dhsnqsnhMHGYQTNDESNTddeiprIKVLAKQLPKGKFLRLRPLEAGY-NPADWKSLLEKYLReNFTTLTRGETITVQApRSEVFRFLIDEVSPNGdG 222
                 888888863322222222224445679999***************8876.568***********9**************945789**********988* PP

        UFD1 159 vsiietdlevdfa 171
                 +++++tdlevd++
  KHJ34568.1 223 ICVVDTDLEVDIE 235
                 ***********97 PP

>> AZUL  Amino-terminal Zinc-binding domain of ubiquitin ligase E3A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.2      0.58   5.2e+03      23      47 ..     382     406 ..     381     407 .. 0.79
   2 ?   -3.1   0.7       1.1   9.5e+03      22      40 ..     465     483 ..     461     496 .. 0.58
   3 ?   -3.7   0.7       1.6   1.5e+04      20      27 ..     573     580 ..     570     584 .. 0.74
   4 !   28.1   0.1   1.9e-10   1.7e-06       4      38 ..     632     663 ..     629     681 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.58
        AZUL  23 nptCassrkapvrrltpnsAaalAl 47 
                 +++C ++++++ +  ++n+ + + +
  KHJ34568.1 382 TENCIKNSENENEIHDENEVQCKTC 406
                 8899999988888888888877665 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.1
        AZUL  22 tnptCassrkapvrrltpn 40 
                 +n  ++ssr++p   +t++
  KHJ34568.1 465 HNNIFHSSRSCPNCSYTAK 483
                 6777777777775555543 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 1.6
        AZUL  20 nCtnptCa 27 
                  C+n +C 
  KHJ34568.1 573 ICRNVYCC 580
                 58888885 PP

  == domain 4  score: 28.1 bits;  conditional E-value: 1.9e-10
        AZUL   4 lveqYfyQLthGCgsknCtnptCassrkapvrrlt 38 
                 + ++Y++QL  GCg++ C+n++C ++++ +   lt
  KHJ34568.1 632 IERRYLSQLISGCGKSWCRNQYCKTAQNLK---LT 663
                 5589*********************98655...33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (741 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       948  (0.0528752); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.46
# Mc/sec: 4866.36
//
Query:       KHJ34569.1  [L=338]
Description: hypothetical protein EV44_g4900 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-23   84.3   7.5      3e-23   83.0   7.5    1.9  1  GET2      GET complex subunit GET2
  ------ inclusion threshold ------
      0.032   14.4   2.2      0.044   13.9   2.2    1.2  1  CAML      Calcium signal-modulating cyclophilin ligand
      0.085   12.0   9.1       0.11   11.6   9.1    1.1  1  TipE      Na+ channel auxiliary subunit TipE
        2.4    8.2   9.7      0.083   12.9   2.0    2.1  2  Mucin     Mucin-like glycoprotein


Domain annotation for each model (and alignments):
>> GET2  GET complex subunit GET2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.0   7.5   6.6e-27     3e-23       4     306 ..      22     331 ..      19     334 .. 0.66

  Alignments for each domain:
  == domain 1  score: 83.0 bits;  conditional E-value: 6.6e-27
        GET2   4 eaEKrrlLRERRqaKmakGgAssRLnkItgqgssvkssttsvLd.....epaaekttpasttasssssas.........ehddpeiediseiavkpkkt 88 
                 +aE++r+++ERR+aK+++G  ++RLnkItg +++ + s+  + d     ++++ k+  ++++       s          +  ++++   ei+ + ++ 
  KHJ34569.1  22 AAEQARIRKERREAKIRAG-STARLNKITGLNKEQQDSQ-EINDskkniNQNEVKSIYTKNEIL-----SssipvplnnSKTTLNEDALREIMRQFNSM 113
                 79*****************.************8877777.333333322222222222222222.....123455666533333444444443333322 PP

        GET2  89 asskkksplseesepeap.qldqllkqllqqqqqgnsensqd...aesstP.dlfsqllkmmkqgegg.sakseeetssspeeaeyqqqlleyhkyqvk 181
                 +++    p +   ++++p ++ +      + ++ ++s+++++   ++   P + +++++k m+q +g   ++++e + +s + +  +q+ l+  +  + 
  KHJ34569.1 114 KNVL---PNDYI-DNNNPfNITNTTTTTTNTTNTTTSQSEMPylaNNAEFPlMTDDPMMKIMQQLMGPtLQNGKEINIPSVPISTDNQEKLTIISPYAY 208
                 2222...22222.33333344433333333322222222222111333455889**********99994334444444444445555566666667788 PP

        GET2 182 klkarfllvrllllllnfvYhvfrssks..............alvralteasvrnFftvFltfEvvllsiyylllkkiekenkvktlnnnslilklvsl 266
                  ++++++l ++ +++ +++   f++++               +l+ + ++++  n+f +F+t+E++l++++y l    +  ++    +  +++ +l++ 
  KHJ34569.1 209 IWRVLHTLWAITFGFSIAISSQFTGTEIdrersflgfenldpELLPFTSSPQ--NYFYLFITIEAILIGTRYILD---R--EDT---KPVGILGMLLDA 297
                 9******************999999999999*******99988888888888..********************9...3..232...344666666664 PP

        GET2 267 vpegvlPianlrgkvalalkYwevlsmlltDlslvvvlfG 306
                 + e       +rg++ l l+Y+++ + +  D +++++++G
  KHJ34569.1 298 LQEP------IRGYLLLGLRYINIWKSVSRDAMICIFILG 331
                 4455......*****************************9 PP

>> CAML  Calcium signal-modulating cyclophilin ligand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   2.2   9.7e-06     0.044       3     101 ..      26     121 ..      22     184 .. 0.53

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 9.7e-06
        CAML   3 aqrraeirrrkLllnseerlnrivGfakpeaedeeeeesevesklqldldk.leslslssvskrvllgdssgakdksksstaerkgsklpdkkdsltke 100
                 a+ r e r  k+   s  rln+i G++k++++++e ++s+ + + q++++   +  ++ s+s +v l++s ++ ++   ++ e+   + + +k+ l+++
  KHJ34569.1  26 ARIRKERREAKIRAGSTARLNKITGLNKEQQDSQEINDSKKNIN-QNEVKSiYTKNEILSSSIPVPLNNSKTTLNED--ALREIMR-QFNSMKNVLPND 120
                 5668999999*******************999887776663333.33333212233333444444445543333332..4444433.333333444333 PP

        CAML 101 s 101
                  
  KHJ34569.1 121 Y 121
                 3 PP

>> TipE  Na+ channel auxiliary subunit TipE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   9.1   2.5e-05      0.11     336     425 ..      51     150 ..      39     182 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.5e-05
        TipE 336 iedelaetdegndnkid.avneseaavtanhine.......nnvdtaGstiindasttattplqqllpnGta..nsstnisqtntnttattntnGsskp 424
                 ++ e  +++e nd k + ++ne ++  t n+i         nn++t+ +++   +   +  +++++lpn     n+  ni++t t+tt ttnt+ s+  
  KHJ34569.1  51 LNKEQQDSQEINDSKKNiNQNEVKSIYTKNEILSssipvplNNSKTTLNEDALREIMRQFNSMKNVLPNDYIdnNNPFNITNTTTTTTNTTNTTTSQSE 149
                 55667788999998865366777777888888778899999999***9999999999999*********975115667888888999999999999865 PP

        TipE 425 i 425
                 +
  KHJ34569.1 150 M 150
                 5 PP

>> Mucin  Mucin-like glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   1.1      0.19   8.7e+02      54      73 ..       4      23 ..       1      50 [. 0.55
   2 ?   12.9   2.0   1.9e-05     0.083      72     104 ..     131     162 ..      59     178 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.19
       Mucin 54 ppttttttttasttittktt 73
                +p++t++t t ++ i+++++
  KHJ34569.1  4 TPAATKVTPTDTPNISSNAA 23
                33444444444433333332 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 1.9e-05
       Mucin  72 ttkattttttttttttateaPsdavttaeaPtt 104
                 t ++tttt+tt ttt+ +e P    + ae P  
  KHJ34569.1 131 TNTTTTTTNTTNTTTSQSEMPY-LANNAEFPLM 162
                 4455566666667777778887.4555666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1653  (0.092197); expected 358.6 (0.02)
Passed bias filter:                      624  (0.0348039); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.45
# Mc/sec: 2278.84
//
Query:       KHJ34570.1  [L=343]
Description: putative duf52 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-75  253.9   0.0    2.9e-75  252.9   0.0    1.4  1  Memo      Memo-like protein


Domain annotation for each model (and alignments):
>> Memo  Memo-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  252.9   0.0   1.6e-79   2.9e-75       2     271 .]       6     340 ..       5     340 .. 0.92

  Alignments for each domain:
  == domain 1  score: 252.9 bits;  conditional E-value: 1.6e-79
        Memo   2 aavAGsfYpedeeelkkqleeflekntgkkei.........arviisPHagyvysgevaakayaeles.skvervvilGpsHtilgskvsvlaaseleT 90 
                 a++AGs+Y++++++l++ +++ l ++    ++         ar+ii PHagy ysg+ aa+aya+l+  ++++r+++lGpsHt + +k+++++ s +eT
  KHJ34570.1   6 ASHAGSWYSSNPKKLSSEIDKWLSQTKTSMNVatkstpmsdARIIIAPHAGYAYSGPAAAYAYAALSVtPSTKRIFLLGPSHTLYLTKCALSTHSYYET 104
                 89*****************9666555544444777889999**************************9999**************************** PP

        Memo  91 PlGdlkvDeelveeLvkkeeiadldetaa.laEHSlEvqlpfLkellkek......kfkivPilvsaqseetakevgealakvikdesnlviiSsDlsH 182
                 P+G l +D+  v +L ++ +++ +++ ++ ++EHSlE++lpf+k+l+ +           vPilv+  s   ++e+g++la ++ d+ nl+iiSsD++H
  KHJ34570.1 105 PFGALSIDTSTVSTLLATGKFE-IMTPETdEKEHSLEMHLPFIKKLVSHTfdspenYPSLVPILVGNTSAAAEREYGRILAPYLADSANLFIISSDFCH 202
                 *****************86665.5555555****************9998888885568**************************************** PP

        Memo 183 ygrrFg........................spqeiaesie..DrevikaleelneeelkeylektnnticGekpiavilkalkklga............ 243
                 +g rFg                        +   i +si   D+ +i+a+e+ +++++ + l++t+nticG++pi v++ al+ l+             
  KHJ34570.1 203 WGLRFGytyylpegvdetqgyeldrrdpnpKLPVIHKSIAklDKLAIDAIESGSYSAFLKNLKNTGNTICGRHPIGVAMAALEVLEKnadgkkitslst 301
                 **************************9988444455555567*****************************************9998899********* PP

        Memo 244 ...........kkakllkYaqssdvtsdtdsvVsyaslv 271
                            +k+k+++Y+ ssdv  + ds+Vsyas++
  KHJ34570.1 302 stcsnevltknRKFKFIRYERSSDVVDISDSSVSYASAY 340
                 **********99************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       316  (0.0176251); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2679.14
//
Query:       KHJ34571.1  [L=590]
Description: putative tripeptidyl-peptidase 1 precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-32  112.9   0.1    2.7e-32  112.0   0.1    1.4  1  Pro-kuma_activ  Pro-kumamolisin, activation domain
    2.2e-08   33.7   0.3    4.6e-08   32.7   0.3    1.4  1  Peptidase_S8    Subtilase family


Domain annotation for each model (and alignments):
>> Pro-kuma_activ  Pro-kumamolisin, activation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.0   0.1     3e-36   2.7e-32       8     142 .]      49     181 ..      42     181 .. 0.97

  Alignments for each domain:
  == domain 1  score: 112.0 bits;  conditional E-value: 3e-36
  Pro-kuma_activ   8 raasstllpvrigLkqnnlekledflmdvsdpkspnygkhltaeevaelfapseeaidaVrnwLessgiaasrhsdtkgwiafsatvaqverllk 102
                     ++++++  ++ri L+++n++++++++ d+s+p++p+yg+h+++e v++++ap +e++d V+ wLe +g  +     +++wi +++t+++ve+ll+
      KHJ34571.1  49 TLDPKHSFKLRIHLRNQNIQSFHRKVLDLSTPGHPDYGQHMDREAVNNYLAPFPESFDLVQGWLEYEGAGNVT--VQNDWIILDTTIEEVEKLLN 141
                     57899999**************************************************************999..******************** PP

  Pro-kuma_activ 103 tsfeaYshkkgssslarcdeyslPealknyvdyihptdnf 142
                     t+++ Y+++++++ ++r+ +y+lP +l++++d++ pt +f
      KHJ34571.1 142 TKYQVYENNETGQLILRTLSYKLPSSLHSHIDLVAPTIKF 181
                     ********9****************************987 PP

>> Peptidase_S8  Subtilase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.7   0.3   5.2e-12   4.6e-08     125     261 ..     354     517 ..     342     524 .. 0.82

  Alignments for each domain:
  == domain 1  score: 32.7 bits;  conditional E-value: 5.2e-12
                   EEE-EESCETTCHHCHHHHHH..HHHHHH.CCT-EEEEE--SS-T-HH...EEE-TTCEEC...TTTSTTCEEEEEES................... CS
                   xxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxx...xxxxxxxxxxxxxx................... RF
  Peptidase_S8 125 inmslgestslpktgrsieal..ainravnkkgvlvviSaGNngktgs...slqagspvgt...pstsknvitvgayt................... 194
                   +++s+g ++++  +++  +++  ++ ++   +gv v +S+G +g +gs   ++  ++  +t   p+++  v+t+ga+                    
    KHJ34571.1 354 LSISYG-DSEWTVPDSYARTVcdMFSQLA-ARGVSVLVSSGDSG-SGSnctETEPSALRYTpsfPASCPFVTTIGATYrvnpevavsfsgggfsdff 447
                   689999.8888887776666677999999.89************.444477555555555544578888*******999****************** PP

                   .............TTSSB-TT--B-TT.......-EEEE-S-.CCCCCCCCCHHHTTTHHEEEE-SHHHCHHHHHHHHHHH CS
                   .............xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8 195 .............tegkiapfSsrGpssdgklkpdivapGgn.ivstwsrqsnnsaglssyqsmsGTSmAsPnaagaaAll 261
                                 e     f ++ ++s g++ pdi+a G+n  v   +++           ++sGTS+++P +a+++All
    KHJ34571.1 448 prpeyqdstvtvyLETADPAFKNYYNTS-GRAYPDISAQGVNfHVFVRGTD----------VLESGTSASAPAMAAIIALL 517
                   *************777778888888877.8999*********333333333..........479***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (590 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 4397.10
//
Query:       KHJ34572.1  [L=310]
Description: hypothetical protein EV44_g2165 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.4e-05   23.3   4.0    6.4e-05   23.3   4.0    2.1  2  Myb_DNA-bind_4  Myb/SANT-like DNA-binding domain
  ------ inclusion threshold ------
       0.22   11.5   4.9       0.31   11.0   3.8    1.8  1  TMEM247         Transmembrane protein 247


Domain annotation for each model (and alignments):
>> Myb_DNA-bind_4  Myb/SANT-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   4.0   7.2e-09   6.4e-05       2      79 ..      11      88 ..      10     109 .. 0.74
   2 ?   -1.8   1.1      0.47   4.2e+03      43      73 ..     248     278 ..     240     291 .. 0.71

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 7.2e-09
                    SSS-HHHHHHHHHHHHH..HHHHHHH..SS--HHHHHHHHHHHHHHC-.---HHHHHHHHHHHHHHHHCSSSSSS---......- CS
  Myb_DNA-bind_4  2 dkWteeetklLieawgerilelrfqergkkrnkklWeevaeamaergy.krspeqCkeKienLkkrYkkekerekgsg......s 79
                    +kW ++e +lL++ w++++ e+ +   + k + ++W    ++++e g  +++  q+k+K+ +  ++Yk ++++  ++g      +
      KHJ34572.1 11 SKWLDHELELLLTWWESNY-ESTI---SAKTQPAIWT---AQVREAGLsTKTTRQIKTKWITWIRSYKITRKKALKNGwesssdT 88
                    79***************74.5545...4678886885...7999***867**********************9988886543330 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.47
                     HHHHHC----HHHHHHHHHHHHHHHHCSSSS CS
  Myb_DNA-bind_4  43 amaergykrspeqCkeKienLkkrYkkeker 73 
                     +ma+  y +s ++ k + e  +k+ + e ++
      KHJ34572.1 248 EMAKLRYAKSSDEQKARHEITMKKLEMEEAQ 278
                     5777777777777777777777776666655 PP

>> TMEM247  Transmembrane protein 247
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   3.8   3.5e-05      0.31     109     148 ..     243     282 ..     223     296 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3.5e-05
     TMEM247 109 vrmefeltrlkylheenerqrqheevmeqlqkeaaaqqal 148
                  r  +e+++l+y +  +e++ +he  m++l+ e+a++q +
  KHJ34572.1 243 QRYHIEMAKLRYAKSSDEQKARHEITMKKLEMEEAQRQRA 282
                 58899**************************998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1269  (0.0707792); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2305.27
//
Query:       KHJ34573.1  [L=106]
Description: putative copper resistance protein crd2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                       65  (0.00362541); expected 358.6 (0.02)
Passed Vit filter:                         8  (0.000446204); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.23s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 857.90
//
Query:       KHJ34574.1  [L=555]
Description: putative isoform cra_b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-33  115.4   0.0    3.8e-33  114.3   0.0    1.6  1  TrmE_N        GTP-binding protein TrmE N-terminus
    4.2e-31  108.7   2.1    5.6e-31  108.3   2.1    1.2  1  MnmE_helical  MnmE helical domain
    3.6e-17   62.5   0.1    8.1e-17   61.3   0.1    1.6  1  MMR_HSR1      50S ribosome-binding GTPase
    1.5e-07   31.6   1.4    1.7e-06   28.2   0.2    2.8  2  Dynamin_N     Dynamin family
    2.9e-06   26.9   0.0    6.5e-06   25.8   0.0    1.6  1  FeoB_N        Ferrous iron transport protein B
     0.0005   19.7   0.1     0.0098   15.5   0.1    2.8  1  GTP_EFTU      Elongation factor Tu GTP binding domain
     0.0028   17.6   0.0       0.33   10.8   0.0    2.6  2  RsgA_GTPase   RsgA GTPase
     0.0035   17.6   0.0      0.056   13.7   0.0    2.4  1  Roc           Ras of Complex, Roc, domain of DAPkinase
     0.0049   17.4   0.3      0.018   15.6   0.1    2.0  2  ABC_tran      ABC transporter
  ------ inclusion threshold ------
      0.017   14.0   0.0      0.033   13.0   0.0    1.4  1  AAA_35        AAA-like domain
      0.036   13.2   2.2       0.26   10.4   0.1    2.5  1  G-alpha       G-protein alpha subunit
       0.24   10.7   0.0       0.33   10.3   0.0    1.2  1  DUF1668       Protein of unknown function (DUF1668)


Domain annotation for each model (and alignments):
>> TrmE_N  GTP-binding protein TrmE N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.3   0.0   2.5e-36   3.8e-33       1     115 []      54     178 ..      54     178 .. 0.87

  Alignments for each domain:
  == domain 1  score: 114.3 bits;  conditional E-value: 2.5e-36
                 -EEEE-S-SSS-SEEEEEEESTTHHHHHHTTEEE..T--CTEEEEEEEECT...TCEEE.EEEEEEEBTTCSTTSSEEEEEEEESSHHHHHHHHHHHHC CS
      TrmE_N   1 TIaAlatpagkgaiaiiRvsGpkaleiakklfkk..elkprkallgklvdee.ekevlD.evlvlvfkaprsyTgedvvElhlhGgpavvkavleallk 95 
                 TI+Al+t++g+ga+ai+R sGp++++i+++l+ k  +++prka+++kl+++   k v+D  +++l+ +ap s Tgedv+El++hGg+a+ kavl+a+  
  KHJ34574.1  54 TIYALSTAPGRGALAIVRTSGPQSISIFNSLCPKsqNPHPRKAIVRKLHNPLnPKIVVDsAAVILFHPAPSSATGEDVLELQIHGGSATQKAVLNAIS- 151
                 9******************************8876566699*******98874677899556666779*****************************3. PP

                 T.......T-EE--CTHHHHHHHHTTS CS
      TrmE_N  96 a.......garlAepGEFtkRaflngk 115
                 +        +r+AepGEFtkRafln k
  KHJ34574.1 152 EvatvknlPIRYAEPGEFTKRAFLNHK 178
                 3355665569***************87 PP

>> MnmE_helical  MnmE helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.3   2.1   3.8e-34   5.6e-31       1     206 []     181     552 ..     181     552 .. 0.88

  Alignments for each domain:
  == domain 1  score: 108.3 bits;  conditional E-value: 3.8e-34
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  MnmE_helical   1 LtqaEavadlIdAeteaaakaalrqleGelskkikelrekllellaeleaaiDFpeed.leelsee...elaekleelkeelekllatakrgellre 93 
                   L+q+Ea+++  +Aete++++aa+r+ +  ls  ++++r+kll ++ e+ea iDF+e++  ee s++   ++ + ++ l +e+e++ + + r+ell+ 
    KHJ34574.1 181 LAQVEALSNELSAETEQQRQAAVRSNSQMLSMTYDSWRQKLLLARGEIEALIDFSEDQnFEEPSQKlfeNVGNYIDVLLREIERFTQASYRQELLKR 277
                   89******************************************************764666666688899999*********************** PP

                   xxx.............................................................................................. RF
  MnmE_helical  94 Gik.............................................................................................. 96 
                   G+k                                                                                              
    KHJ34574.1 278 GVKisllgppnsgkssllnritgreasivcqeagttrdvieirldikgylctiadtaglrdehtssntldttigiveqegirraktiakqsdivilm 374
                   ************************************************************************************************* PP

                   ..................................................xxxxxxx....xxxxxxxxxxxxxxxx..........xxxxxxxxxx RF
  MnmE_helical  97 ..................................................Dllkeke....ekeeeevlkiSaktge..........gieeLeeaik 129
                                                                     D +++ +     k   +++ iS+++++          +i++L +++ 
    KHJ34574.1 375 asfeqdfsgicfikydhsslslaanasnalivvnkcdkiissdqknslikDFQTKVTsafsPKIPPPIIPISCHDNSskgdlkddnhNIQRLSSELL 471
                   ****************************999999999999996666666655555446666555666667787755433333333335999999998 PP

                   x.xx.xxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxx RF
  MnmE_helical 130 e.le.leei...eeeplltnaRhkealekalealeeakealeaglpldlvaedLrealeaLgeItGe...vvtedlLdeIFskFC 206
                   + ++ ++e     e+ + + +R++ +l +  ++l+    ++++g++  ++ae+Lr a+  L +ItG+    ++e+lL+ IF kFC
    KHJ34574.1 472 KvIKgITEFpvdMEDLIGVTERQRLILDEFGSHLR----NFKEGMDIVIAAEHLRLAASCLARITGRgaeGDVEELLGVIFDKFC 552
                   8666544445554479*******************....66677766667****************8544689************ PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.3   0.1   5.4e-20   8.1e-17       1      88 [.     280     380 ..     280     409 .. 0.73

  Alignments for each domain:
  == domain 1  score: 61.3 bits;  conditional E-value: 5.4e-20
                 EEEEEESTTSSHHHHHHHHHTS.TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGC.............SSHHHHHHHHHHHHHHHHCTSEEEEEEET CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge.kaivsdkpgtTrdinegrvklkgkeielvDtpGl.............iegaseekglgkaflaleeadlillvvda 85 
                 ++ ++G pN+GKS+L+n++tg+ ++iv +++gtTrd++e+r+++kg  ++++Dt+Gl             i g  e++g+++a    +++d+++l+ + 
  KHJ34574.1 280 KISLLGPPNSGKSSLLNRITGReASIVCQEAGTTRDVIEIRLDIKGYLCTIADTAGLrdehtssntldttI-GIVEQEGIRRAKTIAKQSDIVILMASF 377
                 5889*****************9678*******************************877777776655551.334567889988888889*99999985 PP

                 TTT CS
    MMR_HSR1  86 see 88 
                 +++
  KHJ34574.1 378 EQD 380
                 532 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1      0.22   3.3e+02      32     100 ..     155     219 ..     141     223 .. 0.74
   2 !   28.2   0.2   1.2e-09   1.7e-06       1      97 [.     281     378 ..     281     431 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.22
                 --S-EEEEECCT---CCS...SSEEEET-EB--CHHHHHHHHHHHHHHHTSSSS--SS-EEEEEEETTS CS
   Dynamin_N  32 Trrplelqlgeeeeaseravkeelkekekkledfsevreeieketekiagankgiskkvillkilsllv 100
                 T + l +++ e +    ++ k  + +++ +l +++++ +e+++ete+  +a  + ++++++++  s+ +
  KHJ34574.1 155 TVKNLPIRYAE-PG---EFTKRAFLNHKLELAQVEALSNELSAETEQQRQAAVRSNSQMLSMTYDSWRQ 219
                 55555555554.33...3566667777899999**************9999999999999888877766 PP

  == domain 2  score: 28.2 bits;  conditional E-value: 1.2e-09
                 EEEEEBTTTTHHHHHHHHHTS--S-.--SSS---S-EEEEECCT---CCS...SSEEEE....T-EB--CHHHHHHHHHHHHHHHTSSSS--SS-EEEE CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilp.rgpnptTrrplelqlgeeeeaseravkeelkek....ekkledfsevreeieketekiagankgiskkvillk 94 
                 i ++G  +sGKSS+ln ++g++     ++  tTr ++e++l+ + +  + a ++ l+++    ++ ++ +  v++e  ++ ++ia    + s++vil+ 
  KHJ34574.1 281 ISLLGPPNSGKSSLLNRITGREASIvCQEAGTTRDVIEIRLDIKGYLCTIADTAGLRDEhtssNTLDTTIGIVEQEGIRRAKTIA----KQSDIVILMA 375
                 6789999***************998345569**********99999885555555666611125555555555555555555555....6666666665 PP

                 EEE CS
   Dynamin_N  95 ils 97 
                  ++
  KHJ34574.1 376 SFE 378
                 554 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   4.3e-09   6.5e-06       2      59 ..     280     338 ..     279     375 .. 0.84

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 4.3e-09
                 EEEEEESTTSSHHHHHHHHHTTSEE.EEESTTSSSEEEEEEEEETTEEEEEEE----SS CS
      FeoB_N   2 tvalvGnpnvGkttlfnaltgakqk.vgNwpGvtvekkegklklkgkeveivDlPGiYs 59 
                 ++ l+G pn+Gk++l+n++tg + + v   +G+t +  e +l++kg+ ++i D  G  +
  KHJ34574.1 280 KISLLGPPNSGKSSLLNRITGREASiVCQEAGTTRDVIEIRLDIKGYLCTIADTAGLRD 338
                 799******************9865278889**********************999754 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.1   6.5e-06    0.0098       4     180 ..     279     462 ..     276     479 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 6.5e-06
                 EEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHH.HSTHCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEES.SSGG..GHHHHHHHHHT-SEEE CS
    GTP_EFTU   4 rnigiighvDhGKtTLtdrLlyktgaiskkgekaee.ervlDtlkeErergiTiksaaisleketkkylinliDtP.GHvd..FskevirglrvlDgav 98 
                 ++i+++g  ++GK++L+ r++ +   i    ++a++ + v+  + + +   +Ti  +a  l    +++  n +Dt  G v+   ++   + +++ D+++
  KHJ34574.1 279 VKISLLGPPNSGKSSLLNRITGREASIVC--QEAGTtRDVIEIRLDIKGYLCTIADTAG-LR--DEHTSSNTLDTTiGIVEqeGIRRAKTIAKQSDIVI 372
                 57888999999999999999988777777..3333314566666666666677765544.44..47777777776447766223556666699****** PP

                 EEEETT...TBSTHHHHHHHHHHHHTTTE.EEEEEESCGST..HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTTTTB..........T CS
    GTP_EFTU  99 lvvdav...eGvepqteevlrlalkegvp.iivfiNKmDrl..kaelkeiveevkqklsrkeeklekygekgekevpvvfgSalkge..........g 180
                 l+ + +   +G++     +  l l+ +     +++NK+D++   ++ + ++++ ++k+       +++    +   p++++S+ ++           +
  KHJ34574.1 373 LMASFEqdfSGICFIKYDHSSLSLAANASnALIVVNKCDKIisSDQKNSLIKDFQTKV-------TSAFSP-KIPPPIIPISCHDNSskgdlkddnhN 462
                 ****9955567************99999989**********76555566666666666.......222222.23567777777777655444444444 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00022      0.33      77     154 ..     255     326 ..     221     342 .. 0.62
   2 ?    4.2   0.0     0.024        36      13      73 ..     364     427 ..     352     458 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00022
                  SEEEE--TTTHTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S--------------SEEEEEETTTEE CS
  RsgA_GTPase  77 yevllvsaktkegleelkellkd.ktsvlvGqSGvGKStLinallpelelktgevseklgrGkhTTtavellelaeggl 154
                  ++vll + ++ ++++  +ellk    + l+G+   GKS+L+n++++++      v ++      TT+ v  ++l+ +g+
   KHJ34574.1 255 IDVLLREIERFTQASYRQELLKRgVKISLLGPPNSGKSSLLNRITGREASI---VCQE--A--GTTRDVIEIRLDIKGY 326
                  456666666666666777788874456699***************984332...2222..1..2566666666655554 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.024
                  EES--EEEEEEESTTTT--HHHHHHH...HHHHHHTT-EEEEEEE-GGG--HHHHHHHHHHHHH CS
  RsgA_GTPase  13 vaNvdqllivvslkepelslnlldrf...LvlaeekgiepvivlnKiDlleeeeeleelkeele 73 
                  +a    ++i+++  e+++s     ++    + + ++  + +iv+nK+D + ++++ ++l ++++
   KHJ34574.1 364 IAKQSDIVILMASFEQDFSGICFIKYdhsSLSLAANASNALIVVNKCDKIISSDQKNSLIKDFQ 427
                  6666667777777778877665544422245666777899********9988886666666554 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   3.8e-05     0.056       1      38 [.     280     318 ..     280     412 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 3.8e-05
                 EEEEESSTTSSHHHHHHCHCT-CCC.-EEETTTTEEEEE CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfs.ekekstigvdflt 38 
                 K+ l+G  ++GK+sll+r++ ++ s   +++ +  d+++
  KHJ34574.1 280 KISLLGPPNSGKSSLLNRITGREASiVCQEAGTTRDVIE 318
                 899****************98877522222222233333 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       3.9   5.8e+03      97     110 ..     198     211 ..     140     236 .. 0.58
   2 !   15.6   0.1   1.2e-05     0.018       8      77 ..     275     365 ..     273     435 .. 0.62

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 3.9
                 TTCBGESTTSGGS- CS
                 xxxxxxxxxxxxxx RF
    ABC_tran  97 lkdtvvksspssLS 110
                  ++  v+s+ + LS
  KHJ34574.1 198 QRQAAVRSNSQMLS 211
                 22222222223333 PP

  == domain 2  score: 15.6 bits;  conditional E-value: 1.2e-05
                 EETTSEEEEEESTTSSHHHHHHHHTTSS--....SEEEE..................EETTCEGGG..B-HHHCCHCEEEE-SS--S-TTSBHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxx..................xxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   8 lkegekvaivGenGaGKStLlkllagllkp....teGei..................lldgkdlke..qeleslrkeigvlpqepqlfpeltvr 77 
                 lk+g k+ ++G+  +GKS+Ll+ ++g +      ++G+                       + l++  ++ + l+  ig+++qe  + + +t++
  KHJ34574.1 275 LKRGVKISLLGPPNSGKSSLLNRITGREASivcqEAGTTrdvieirldikgylctiaD--TAGLRDehTSSNTLDTTIGIVEQE-GIRRAKTIA 365
                 68999*********************98876665555545545555555555443220..222222444455566666666666.444444444 PP

>> AAA_35  AAA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   2.2e-05     0.033      19      55 ..     266     302 ..     258     314 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.2e-05
      AAA_35  19 ieekcyeeiekpGalirikapkkmGKtSLlarilaka 55 
                 ++ +  +e+ k+G+ i + +p + GK+SLl+ri  + 
  KHJ34574.1 266 TQASYRQELLKRGVKISLLGPPNSGKSSLLNRITGRE 302
                 5677889**************************8765 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.1   0.00017      0.26      16      46 ..     272     301 ..     259     321 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00017
                 XXXXE..EEEEEEEESTTSSHHHHHHHHHHH CS
     G-alpha  16 karkkkrevkllllGqseSGKsTilkqlkll 46 
                 ++   kr vk+ llG   SGKs++l+ +   
  KHJ34574.1 272 QELL-KRGVKISLLGPPNSGKSSLLNRITGR 301
                 2222.689******************98754 PP

>> DUF1668  Protein of unknown function (DUF1668)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00022      0.33      68     129 ..       2      64 ..       1     114 [. 0.85

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00022
     DUF1668  68 kmefaalagdkivavdqsgrtllYdtktravvtlPs..lkspkllpvsvavgdklYvldrspkd 129
                 ++++a l++  ++  d++ r l ++ + r+++++P+  l s + +  s +v+d++Y+l++ p +
  KHJ34574.1   2 RCSCAILRKPTVLNLDNHFRLLTCEVRFRNIRAIPDrkL-SSNHFDSSSYVDDTIYALSTAPGR 64 
                 68999*******************************955.5555556999*********99865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.37
# Mc/sec: 4455.53
//
Query:       KHJ34575.1  [L=111]
Description: putative 60s acidic ribosomal protein p1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-24   86.2   6.9    2.1e-24   85.9   6.9    1.1  1  Ribosomal_60s  60s Acidic ribosomal protein
     0.0038   15.8   2.2     0.0048   15.4   2.2    1.1  1  Cytomega_UL84  Cytomegalovirus UL84 protein
  ------ inclusion threshold ------
      0.032   15.1   1.2      0.051   14.5   1.2    1.3  1  WRNPLPNID      Putative WW-binding domain and destruction box


Domain annotation for each model (and alignments):
>> Ribosomal_60s  60s Acidic ribosomal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.9   6.9   3.5e-28   2.1e-24       2      88 .]      22     110 ..      21     110 .. 0.76

  Alignments for each domain:
  == domain 1  score: 85.9 bits;  conditional E-value: 3.5e-28
                    XXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XX--SS--STTT CS
  Ribosomal_60s   2 ptaenikkvlkaagv.eveaarvkllvkalegkdieellangaaklaaaaaaaaaaaaaaaaaaaaeekkkeeeee..EeedddmGfgLF 88 
                    +ta+++++++kaag+ +ve++++ l++kal gkd++++l n+++++  +aaa+a+++ a+aa+a +++k++e+eee  Ee+d+dmGfgLF
     KHJ34575.1  22 VTADKLQSLIKAAGIdDVEPIWTTLFAKALDGKDVKDMLLNVGSGGG-GAAAPASSGDAGAASATEDKKAEEKEEEkeEESDEDMGFGLF 110
                    89*************88**************************9964.4444444444444433333333333333449*********** PP

>> Cytomega_UL84  Cytomegalovirus UL84 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   2.2   8.1e-07    0.0048     139     177 ..      66     104 ..      56     107 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 8.1e-07
  Cytomega_UL84 139 ngesqtapatsqeeetaashepekkkekeekkeeededd 177
                     g   +apa+s +  +a++ e +k  ekee keee ++d
     KHJ34575.1  66 GGGGAAAPASSGDAGAASATEDKKAEEKEEEKEEESDED 104
                    4556789******999999999999****9999987766 PP

>> WRNPLPNID  Putative WW-binding domain and destruction box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   1.2   8.5e-06     0.051      19      63 ..      55     107 ..      50     109 .. 0.46

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 8.5e-06
   WRNPLPNID  19 eLeeLllldse......aeessege...svdedeeaeeeeeeeeeeedeedsgf 63 
                 +  ++ll   +      a  ss +    s  ed++aee +eee+eee++ed gf
  KHJ34575.1  55 DVKDMLLNVGSggggaaAPASSGDAgaaSATEDKKAEE-KEEEKEEESDEDMGF 107
                 56666665555666665333332223333334433333.444444444555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       970  (0.0541023); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 879.28
//
Query:       KHJ34576.1  [L=446]
Description: putative methionine aminopeptidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-39  136.2   0.0    1.5e-39  135.8   0.0    1.2  1  Peptidase_M24   Metallopeptidase family M24
  ------ inclusion threshold ------
       0.12   12.4   0.0       0.27   11.3   0.0    1.6  1  CagE_TrbE_VirB  CagE, TrbE, VirB family, component of type IV
        3.6    7.2   9.4        5.4    6.7   9.4    1.2  1  CCDC106         Coiled-coil domain-containing protein 106


Domain annotation for each model (and alignments):
>> Peptidase_M24  Metallopeptidase family M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.8   0.0   2.6e-43   1.5e-39       2     208 ..     129     433 ..     128     434 .. 0.88

  Alignments for each domain:
  == domain 1  score: 135.8 bits;  conditional E-value: 2.6e-43
                    HHHHHHHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHTT..........TCEESSSSEEEEGGGGGSTTTBC...SSSB--TTEEEEEEEEEE CS
  Peptidase_M24   2 lirkaariasaaleavleaikpgvterelaaeieattlkrhg..........arglafppivasgenaavlhytp...ndrvlkegdlvlidagae 84 
                    ++r+ a+i++++++ + ++ikpg +  e+a+ ie+ +++  g           +g+afp  ++++  + ++hy+p   n++ l ++ ++++d+g++
     KHJ34576.1 129 EYRQGAEIHRQVRQWAQKNIKPGQSLIEIAEGIEDGVRALSGhpgleegdniLGGVAFP--TGLNLDHIAAHYSPnfgNKTILSKDNVMKVDFGVH 222
                    69********************************986655556788888999*******..9999999999****8878888************** PP

                    ETTEEEEEEEEEECSSGSHHHHHHHHHHHHHHHHHHHC-STTSBHHHHHHHHHHHHHHTTB........CCGBSSCSEEEESS.SSSEE..EEEES CS
  Peptidase_M24  85 ydgyasDitrTvlvGkftpeqrelyeavleaqeaaikavkpGvtlseidaaarevlesagl........akffphglGHgvGl.evhde..gpsvs 169
                    ++g + D+++T+++   +p +++l+eav++a++++ik++  +++l+ei+aa++e++es++          k ++++ GH + + ++h++  +p+v+
     KHJ34576.1 223 INGRIVDSAFTMSF---DPTYDNLLEAVKQATNTGIKEAGIDARLGEIGAAIQETMESYECtingkthpIKCIRNLHGHDIRRwQIHGGksVPIVK 315
                    **************...99***************************************733345555555999*********99***874455666 PP

                    SSTTCSSB--TTBEEEEEE......EEEEETTT............................................................... CS
  Peptidase_M24 170 resndgrkleeGmvftiEp......giyfapge............................................................... 196
                      snd++k+eeG+vf+iE+      g++  +                                                                 
     KHJ34576.1 316 --SNDQTKMEEGEVFAIETfgstgnGYVRDD-Yetshyakmidapknvalrilsankllnvinknfgtlpfcrryldrlgqekyllglntlvsngi 408
                    ..899**************988888666333.1355566677777778888889999999999999999999999********************* PP

                    .............EEEEEBEEEEEE CS
  Peptidase_M24 197 .............ggvriedtvlvt 208
                                 +++++e+t+l++
     KHJ34576.1 409 veaypplvdkkgsYTAQFEHTILLR 433
                    ***********977********986 PP

>> CagE_TrbE_VirB  CagE, TrbE, VirB family, component of type IV transporter system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   4.4e-05      0.27      11      58 ..     269     320 ..     262     356 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 4.4e-05
  CagE_TrbE_VirB  11 llfselleflnflinGenepvklpsgsmlldeliat......skvpfgkdkfii 58 
                     +  +e++e ++  inG+++p+k++++  l+   i+       ++vp+ k   ++
      KHJ34576.1 269 AAIQETMESYECTINGKTHPIKCIRN--LHGHDIRRwqihggKSVPIVKSNDQT 320
                     67899*********************..88888876445556666666655333 PP

>> CCDC106  Coiled-coil domain-containing protein 106
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   9.4    0.0009       5.4      43     123 ..       5      83 ..       1      87 [. 0.66

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0009
     CCDC106  43 issksleaeaekeskskksekkaek.sesessssseesddsssdssessessegsstekkkkkkkkkekkkkkktkkrerkr 123
                 +ss     eae+  k k+se+ +++  +++++s++ + d++  d  e++++ +g+s +kk+kkkk ++k + + tk+ +  r
  KHJ34576.1   5 MSSDPK--EAEEYFKVKESETLKASeIDRNETSNGPKDDSEIEDERETGDKVSGTSITKKRKKKK-SKKSRANATKQSDPPR 83 
                 545544..456666666666654441467777888888888888899999999988888777774.6666667777666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (446 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1024  (0.0571142); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 3231.39
//
Query:       KHJ34577.1  [L=219]
Description: putative trnahis guanylyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-53  179.4   0.1    3.4e-53  179.0   0.1    1.2  1  Thg1      tRNAHis guanylyltransferase
    8.2e-40  135.8   0.1    1.2e-39  135.2   0.1    1.3  1  Thg1C     Thg1 C terminal domain
  ------ inclusion threshold ------
      0.019   14.6   0.0      0.034   13.9   0.0    1.3  1  zf_Hakai  C2H2 Hakai zinc finger domain


Domain annotation for each model (and alignments):
>> Thg1  tRNAHis guanylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  179.0   0.1   5.6e-57   3.4e-53       1     125 []       6     136 ..       6     136 .. 0.97

  Alignments for each domain:
  == domain 1  score: 179.0 bits;  conditional E-value: 5.6e-57
        Thg1   1 yeyvkefeqddkllpntlivvRiDGrgFhkfskkhkfekPnDeralklmneaakelvkefedivlaYgqSDEislvlsketklynrraqklvslvaslf 99 
                 yeyvk feq d+llp+t++vvRiDG+gFhkf+++++fekPnD+r l+lmn+aak++++e++div+aYg+SDE+s++++k ++ly+rr++kl+s+v+s+f
  KHJ34577.1   6 YEYVKLFEQPDTLLPETWLVVRIDGKGFHKFTNRYSFEKPNDRRNLDLMNSAAKAVMSEIHDIVMAYGVSDEYSFIFHKFCELYDRRQSKLLSTVVSTF 104
                 79************************************************************************************************* PP

        Thg1 100 taafvkllskaf.....e.elpsFDarvvlyp 125
                 t++++++++++f     + +lp+FD+rvv+yp
  KHJ34577.1 105 TSYYIHYWPDFFldvalSpPLPTFDGRVVMYP 136
                 ************987762478**********9 PP

>> Thg1C  Thg1 C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.2   0.1     2e-43   1.2e-39       2      78 ..     140     216 ..     139     219 .] 0.97

  Alignments for each domain:
  == domain 1  score: 135.2 bits;  conditional E-value: 2e-43
       Thg1C   2 nlrDYlsWRqvDchinnlYNttFWalvqkgglteqeaeeeLkgtlskdkneiLfsefginYnnepeifrkGsvlvre 78 
                  lrDYlsWRqvDchinnlYNttFW+l+q ggl++++ae+eL+gtl++dk+eiLfs+f+inY +epei++kG++++ +
  KHJ34577.1 140 CLRDYLSWRQVDCHINNLYNTTFWSLIQLGGLDAKSAEKELTGTLAADKHEILFSRFKINYSKEPEIYKKGTIVIYD 216
                 69************************************************************************976 PP

>> zf_Hakai  C2H2 Hakai zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   5.6e-06     0.034       9      27 ..     137     155 ..     128     156 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 5.6e-06
    zf_Hakai   9 vegCrRTYLSqRDLqAHIk 27 
                 +e+C R YLS R    HI+
  KHJ34577.1 137 NEKCLRDYLSWRQVDCHIN 155
                 69****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1628.22
//
Query:       KHJ34578.1  [L=342]
Description: putative c2h2 finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-11   43.7   9.9    2.1e-05   24.7   4.5    2.9  2  zf-C2H2      Zinc finger, C2H2 type
    1.1e-09   38.2  11.4    0.00011   22.4   0.1    3.7  3  zf-H2C2_2    Zinc-finger double domain
    2.9e-07   30.7   9.2     0.0012   19.5   3.2    2.8  2  zf-C2H2_4    C2H2-type zinc finger
      2e-05   24.8   1.6      2e-05   24.8   1.6    2.4  2  zf-met       Zinc-finger of C2H2 type
    0.00011   22.1   2.4    0.00011   22.1   2.4    2.4  2  zf-C2H2_6    C2H2-type zinc finger
    0.00014   22.0   3.0    0.00041   20.6   1.1    2.5  2  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
  ------ inclusion threshold ------
      0.028   14.7   0.9      0.028   14.7   0.9    2.3  2  zf-C2H2_2    C2H2 type zinc-finger (2 copies)
      0.052   13.5   2.2        6.1    6.9   0.1    2.5  2  zf-C2HC_2    zinc-finger of a C2HC-type
      0.056   13.2   5.0        3.1    7.6   0.3    2.5  2  zf-C2H2_11   zinc-finger C2H2-type


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   4.5   1.1e-08   2.1e-05       1      23 []     273     295 ..     273     295 .. 0.97
   2 !   21.2   0.2   1.4e-07   0.00027       1      23 []     301     325 ..     301     325 .. 0.98

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 1.1e-08
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 +kC++C+k+F+r+s+L++H+ +H
  KHJ34578.1 273 HKCKVCDKRFTRPSSLQTHMYSH 295
                 79******************999 PP

  == domain 2  score: 21.2 bits;  conditional E-value: 1.4e-07
                 EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                 ++C+  +Cg+ F+  snL+rH+++H
  KHJ34578.1 301 FVCNmgGCGRQFSVVSNLRRHQKVH 325
                 89*********************99 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   1.0   0.00019      0.38      13      26 .]     271     284 ..     266     284 .. 0.89
   2 !   22.4   0.1   5.7e-08   0.00011       1      24 [.     287     312 ..     287     313 .. 0.86
   3 !    9.9   0.7   0.00053       1.1       1      13 [.     317     329 ..     317     332 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00019
   zf-H2C2_2  13 kpyeCplCdkaFkt 26 
                 k+++C++Cdk+F++
  KHJ34578.1 271 KKHKCKVCDKRFTR 284
                 68**********85 PP

  == domain 2  score: 22.4 bits;  conditional E-value: 5.7e-08
   zf-H2C2_2   1 nLrrHirkHtgekpyeCp..lCdkaF 24 
                 +L+ H+++Htgekp+ C    C+  F
  KHJ34578.1 287 SLQTHMYSHTGEKPFVCNmgGCGRQF 312
                 5999*************877787776 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00053
   zf-H2C2_2   1 nLrrHirkHtgek 13 
                 nLrrH+++H++e+
  KHJ34578.1 317 NLRRHQKVHKNET 329
                 8**********98 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   3.2   6.2e-07    0.0012       1      23 [.     273     295 ..     273     296 .. 0.96
   2 !   14.0   0.3   3.4e-05     0.068       1      23 [.     301     325 ..     301     326 .. 0.90

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 6.2e-07
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 +kC++C+k+F+++++L++H+ +h
  KHJ34578.1 273 HKCKVCDKRFTRPSSLQTHMYSH 295
                 69*******************99 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 3.4e-05
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkth 23 
                 f C    Cg+ Fs  ++L+rH k h
  KHJ34578.1 301 FVCNMggCGRQFSVVSNLRRHQKVH 325
                 7788888*****99999*****999 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1       4.4   8.8e+03      11      19 ..      87      95 ..      87      95 .. 0.85
   2 !   24.8   1.6     1e-08     2e-05       2      23 ..     274     295 ..     272     296 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 4.4
      zf-met 11 nsesqlksH 19
                ns  +++sH
  KHJ34578.1 87 NSIDNYNSH 95
                678899**9 PP

  == domain 2  score: 24.8 bits;  conditional E-value: 1e-08
      zf-met   2 yCelCnvtfnsesqlksHlqGK 23 
                  C++C+++f+ +s+l++H+ ++
  KHJ34578.1 274 KCKVCDKRFTRPSSLQTHMYSH 295
                 5******************997 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   2.4   5.7e-08   0.00011       2      24 ..     273     295 ..     272     298 .. 0.95
   2 ?    1.7   0.2      0.14   2.8e+02       7      25 ..     308     326 ..     307     328 .. 0.90

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 5.7e-08
   zf-C2H2_6   2 heCsvCsksFpslqaLggHkksH 24 
                 h+C+vC+k+F    +L +H++sH
  KHJ34578.1 273 HKCKVCDKRFTRPSSLQTHMYSH 295
                 9********************** PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.14
   zf-C2H2_6   7 CsksFpslqaLggHkksHr 25 
                 C+++F+   +L+ H k H+
  KHJ34578.1 308 CGRQFSVVSNLRRHQKVHK 326
                 9*****999*****99886 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   1.1   2.1e-07   0.00041       1      24 [.     272     295 ..     272     295 .. 0.94
   2 ?   -0.1   0.0      0.62   1.2e+03       7      22 ..     308     323 ..     308     323 .. 0.90

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 2.1e-07
                  ECBBTTTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz   1 qfYCvlCdKyFksenaldnHlkSK 24 
                  ++ C++CdK F   ++l++H+ S+
   KHJ34578.1 272 KHKCKVCDKRFTRPSSLQTHMYSH 295
                  689******************996 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.62
                  TTBBBSSHHHHHCCTT CS
  zf-C2H2_jaz   7 CdKyFksenaldnHlk 22 
                  C ++F+  ++l+ H+k
   KHJ34578.1 308 CGRQFSVVSNLRRHQK 323
                  999**99999999987 PP

>> zf-C2H2_2  C2H2 type zinc-finger (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.9   1.4e-05     0.028      42      73 ..     264     295 ..     254     302 .. 0.77
   2 ?   -0.4   0.2      0.73   1.5e+03      56      77 ..     308     327 ..     298     341 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.4e-05
   zf-C2H2_2  42 ylrekieekleClyCekefkslealreHmkkk 73 
                 +++++  +k++C +C+k+f+  ++l++Hm ++
  KHJ34578.1 264 KITSNTLKKHKCKVCDKRFTRPSSLQTHMYSH 295
                 444444447********************875 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.73
   zf-C2H2_2  56 CekefkslealreHmkkkgHck 77 
                 C+++f+ +++lr H k   H++
  KHJ34578.1 308 CGRQFSVVSNLRRHQKV--HKN 327
                 99999999999999544..333 PP

>> zf-C2HC_2  zinc-finger of a C2HC-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.3    0.0072        14       4      20 ..     274     291 ..     272     294 .. 0.92
   2 ?    6.9   0.1     0.003       6.1       7      23 ..     307     324 ..     307     324 .. 0.91

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0072
   zf-C2HC_2   4 pCpkCgRsF.npdrlekH 20 
                 +C+ C  +F  p++l+ H
  KHJ34578.1 274 KCKVCDKRFtRPSSLQTH 291
                 8**************988 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.003
   zf-C2HC_2   7 kCgRsF.npdrlekHepv 23 
                 +CgR+F  ++ l +H++v
  KHJ34578.1 307 GCGRQFsVVSNLRRHQKV 324
                 5*****99999****996 PP

>> zf-C2H2_11  zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.7    0.0025         5       5      24 ..     273     292 ..     267     293 .. 0.90
   2 ?    7.6   0.3    0.0016       3.1      10      29 .]     308     326 ..     306     326 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0025
  zf-C2H2_11   5 cqCleCGlcftSqlsLsRHl 24 
                 ++C  C   ft   sL+ H+
  KHJ34578.1 273 HKCKVCDKRFTRPSSLQTHM 292
                 789999999**********9 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0016
  zf-C2H2_11  10 CGlcftSqlsLsRHlfIvHK 29 
                 CG+ f+    L+RH   vHK
  KHJ34578.1 308 CGRQFSVVSNLRRHQK-VHK 326
                 **************65.565 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (342 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2427.41
//
Query:       KHJ34579.1  [L=969]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-49  164.8  23.6    2.5e-06   28.1   0.0   12.7 12  WD40             WD domain, G-beta repeat
    5.4e-21   74.7   6.4      0.004   17.4   0.0    9.8 10  ANAPC4_WD40      Anaphase-promoting complex subunit 4 WD40 do
    4.1e-18   65.7   2.1    7.3e-18   64.8   2.1    1.4  1  Utp12            Dip2/Utp12 Family
    2.4e-08   33.3   7.3      0.074   12.0   0.1    7.2  8  Ge1_WD40         WD40 region of Ge1, enhancer of mRNA-decappi
    2.6e-05   23.7   1.0       0.63    9.3   0.1    4.2  5  WD40_like        WD40-like domain
    0.00011   21.1   2.1       0.21   10.2   0.0    5.0  6  Nup160           Nucleoporin Nup120/160
     0.0052   16.7   0.8       0.53   10.1   0.0    4.2  4  eIF2A            Eukaryotic translation initiation factor eIF
  ------ inclusion threshold ------
      0.017   13.9   7.4       0.19   10.4   0.2    4.5  6  Nucleoporin_N    Nup133 N terminal like
       0.56    9.7   6.0       0.46   10.0   0.7    2.8  3  Vmethyltransf_C  Viral methyltransferase C-terminal


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.7   0.2     9e-05      0.18      13      38 .]      73      99 ..      65      99 .. 0.87
   2 !   24.6   0.2   1.6e-08   3.3e-05       6      38 .]     108     141 ..     103     141 .. 0.93
   3 !    8.8   0.0    0.0016       3.1       4      38 .]     148     208 ..     145     208 .. 0.75
   4 !    8.0   0.2    0.0028       5.5       9      38 .]     217     251 ..     210     251 .. 0.72
   5 ?    2.7   0.1      0.13   2.6e+02      11      37 ..     285     311 ..     267     312 .. 0.76
   6 !   18.9   0.0     1e-06     0.002       6      38 .]     433     465 ..     428     465 .. 0.92
   7 ?    0.6   0.0      0.63   1.3e+03       2      37 ..     470     504 ..     469     505 .. 0.72
   8 !   28.1   0.0   1.3e-09   2.5e-06       7      38 .]     515     547 ..     511     547 .. 0.93
   9 !    7.9   0.0    0.0031       6.1      11      37 ..     577     603 ..     568     603 .. 0.86
  10 !   18.8   0.0   1.1e-06    0.0022       6      37 ..     613     645 ..     608     645 .. 0.89
  11 !   12.1   0.2   0.00014      0.28       2      38 .]     651     693 ..     650     693 .. 0.90
  12 !   25.0   0.1   1.2e-08   2.4e-05       7      37 ..     703     734 ..     697     735 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 9e-05
                EEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40 13 vtsla.fspdgawlasGsdDgtvriWd 38
                vt+++  + d + +a G +Dg++r+Wd
  KHJ34579.1 73 VTAISkSNADRDIFAVGYEDGSIRVWD 99
                78888889999999************9 PP

  == domain 2  score: 24.6 bits;  conditional E-value: 1.6e-08
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++ GH s +t l+f+ +g+ lasGs+D  + +Wd
  KHJ34579.1 108 KFNGHrSEITTLKFDGSGTKLASGSKDTDIILWD 141
                 589**999*************************9 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0016
                 EEEEESSSS.EEEEE.EETTSSE........................EEEEETTSEEEEEE CS
        WD40   4 lrtltGHss.vtsla.fspdgaw........................lasGsdDgtvriWd 38 
                 l +l+GH++ +t+l  f p+ ++                        l++ ++D  +++Wd
  KHJ34579.1 148 LFKLRGHKDqITGLEfFKPETNLdgfigedgqalvvsendlevserfLLTTGKDALIKLWD 208
                 56799**555****986666666777777777777777777777777777788*******9 PP

  == domain 4  score: 8.0 bits;  conditional E-value: 0.0028
                 SS..SS...EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH..ss...vtslafspdgawlasGsdDgtvriWd 38 
                 +H  +s    +s+   pdga  ++G+ Dg + iW+
  KHJ34579.1 217 THvaQSngeCWSIGIFPDGAGCITGGNDGELNIWS 251
                 44331234566777999****99***********5 PP

  == domain 5  score: 2.7 bits;  conditional E-value: 0.13
                 SSEEEEEEETTSSEEEE.EETTSEEEEE CS
        WD40  11 ssvtslafspdgawlas.GsdDgtvriW 37 
                 s +++++f+ +++++a  G   ++v +W
  KHJ34579.1 285 SKIRDIRFHFSHNYFAVhGN-EKSVELW 311
                 3499**********974345.9999999 PP

  == domain 6  score: 18.9 bits;  conditional E-value: 1e-06
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +l GH  ++++l+ s+d +++as+s +g +++W+
  KHJ34579.1 433 ELPGHrADIRALSLSSDDRMVASAS-NGELKVWN 465
                 588**999*****************.*******8 PP

  == domain 7  score: 0.6 bits;  conditional E-value: 0.63
                 EEEEEEE.SSSSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   2 qclrtlt.GHssvtslafspdgawlasGsdDgtvriW 37 
                 +c+rt++ G     +++f p  + l+ G++ g + ++
  KHJ34579.1 470 NCIRTFEcGY--ALCCSFLPGDKILVVGTKTGDLELF 504
                 6788877344..45999*******9999876666665 PP

  == domain 8  score: 28.1 bits;  conditional E-value: 1.3e-09
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +++H s +++l+++p+g+ l+sGs D+tv++W+
  KHJ34579.1 515 IKAHeSAIWALQVHPNGQSLISGSADKTVKFWN 547
                 579*888*************************8 PP

  == domain 9  score: 7.9 bits;  conditional E-value: 0.0031
                 SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  11 ssvtslafspdgawlasGsdDgtvriW 37 
                 +++ s++fspd +++a +  D tv+++
  KHJ34579.1 577 DDILSVRFSPDARLIAIALLDSTVKVF 603
                 4699************9988****985 PP

  == domain 10  score: 18.8 bits;  conditional E-value: 1.1e-06
                 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                  l GH  +v  ++ s d+++++++s D+++r+W
  KHJ34579.1 613 NLYGHkLPVLNMDISFDSKLIVTCSADKNIRLW 645
                 5779*777************************* PP

  == domain 11  score: 12.1 bits;  conditional E-value: 0.00014
                 EEEEEEESS.SSEEEEE.....EETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtsla.....fspdgawlasGsdDgtvriWd 38 
                 +c + + +H +s+  +a     ++ +g+ ++s+s+D+ ++ Wd
  KHJ34579.1 651 DCRKAFFAHqDSILQVAfirnnYDGNGHHFFSSSKDKMIKYWD 693
                 67777889*88899999999**********************9 PP

  == domain 12  score: 25.0 bits;  conditional E-value: 1.2e-08
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 l  H + ++++a+s +g++l+s+s D+++r+W
  KHJ34579.1 703 LVNHhGEIWAIAVSNSGKFLVSASHDKSIRLW 734
                 4445477**************9999******* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   2.7e-05     0.053      40      89 ..      72     121 ..      41     121 .. 0.77
   2 !   17.4   0.0     2e-06     0.004       6      88 ..      82     162 ..      79     165 .. 0.82
   3 ?    2.2   0.0      0.11   2.2e+02      47      81 ..     189     223 ..     173     257 .. 0.82
   4 ?    4.6   0.0      0.02        40      34      78 ..     280     324 ..     266     349 .. 0.88
   5 ?    0.8   0.1      0.31   6.2e+02      37      71 ..     376     414 ..     369     423 .. 0.73
   6 !    8.6   0.0    0.0011       2.2      35      82 ..     435     481 ..     425     486 .. 0.85
   7 !   11.6   0.0   0.00013      0.26      46      86 ..     485     524 ..     480     530 .. 0.87
   8 ?    2.8   0.0     0.074   1.5e+02      36      66 ..     517     547 ..     515     552 .. 0.88
   9 !   12.6   0.0   6.4e-05      0.13       2      89 ..     583     668 ..     582     671 .. 0.92
  10 !    6.4   0.1    0.0055        11      36      73 ..     705     742 ..     687     754 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.7e-05
  ANAPC4_WD40  40 evrsLaW.kpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  +v++++  + d  ++av+y+dg++r+ d ++ +++ +++ ++++ +t+l++
   KHJ34579.1  72 QVTAISKsNADRDIFAVGYEDGSIRVWDFKTSTIIVKFNGHRSE-ITTLKF 121
                  55555540346679*************************99995.999875 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 2e-06
  ANAPC4_WD40   6 tmDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                   +D++A++ edg+++v  ++   +     +++ se++ L++  +g+ La + +d+ + l d  ++  + +l+ ++++ +t l+
   KHJ34579.1  82 DRDIFAVGYEDGSIRVWDFKTSTIIVK-FNGHRSEITTLKFDGSGTKLASGSKDTDIILWDLIDEVGLFKLRGHKDQ-ITGLE 162
                  579999999999999999987666544.4899999999999999999999999999999999998888888888774.77766 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.11
  ANAPC4_WD40  47 kpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  + ++++L    +d  ++l d+es +++++  ++s+
   KHJ34579.1 189 EVSERFLLTTGKDALIKLWDIESRHCIETHVAQSN 223
                  5678999999****************998777665 PP

  == domain 4  score: 4.6 bits;  conditional E-value: 0.02
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsv 78 
                  +++  s++r+++++ + + +av  ++ +v+l  + s++ ++++ +
   KHJ34579.1 280 QCQGRSKIRDIRFHFSHNYFAVHGNEKSVELWRIRSEEEIKKSLA 324
                  567889*****************************9999988755 PP

  == domain 5  score: 0.8 bits;  conditional E-value: 0.31
  ANAPC4_WD40  37 edsevrsLaWkpdgk....lLavaysdgevrlldaesgk 71 
                  ++++vrs+ W ++       + va+ +++++++++ +++
   KHJ34579.1 376 TSGKVRSVDWVKNKAskamQILVATTNNQLEVYNIMTKD 414
                  678899999977653122247899999999999988765 PP

  == domain 6  score: 8.6 bits;  conditional E-value: 0.0011
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksek 82 
                  +++   +r+L+ + d+++ a   s+ge+++ ++ + +++++++++   
   KHJ34579.1 435 PGHRADIRALSLSSDDRMVAS-ASNGELKVWNVRTRNCIRTFECGYAL 481
                  5677899*********99876.59*******************99874 PP

  == domain 7  score: 11.6 bits;  conditional E-value: 0.00013
  ANAPC4_WD40  46 WkpdgklLavaysdgevrlldaesgkvvhslsvksekavtc 86 
                  + p +k+L+v+++ g ++l+d+ s+ ++  ++++++ a+  
   KHJ34579.1 485 FLPGDKILVVGTKTGDLELFDVASAAMLDRIKAHES-AIWA 524
                  66889***************************9988.4655 PP

  == domain 8  score: 2.8 bits;  conditional E-value: 0.074
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlld 66 
                  +++s + +L+ +p+g+ L  + +d +v++ +
   KHJ34579.1 517 AHESAIWALQVHPNGQSLISGSADKTVKFWN 547
                  56788999******************99865 PP

  == domain 9  score: 12.6 bits;  conditional E-value: 6.4e-05
  ANAPC4_WD40   2 swcptmDLiAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                  +++p   LiA+a  d+ + vf ++  +++     +++  v ++  + d kl++   +d ++rl     g++ +++ +++++ +  + +
   KHJ34579.1 583 RFSPDARLIAIALLDSTVKVFFVDSLKLFLN-LYGHKLPVLNMDISFDSKLIVTCSADKNIRLWGLDFGDCRKAFFAHQDS-ILQVAF 668
                  699************************9987.699****************************************999995.777665 PP

  == domain 10  score: 6.4 bits;  conditional E-value: 0.0055
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvv 73 
                  ++ +e+ ++a +++gk+L+ a +d ++rl +  ++++ 
   KHJ34579.1 705 NHHGEIWAIAVSNSGKFLVSASHDKSIRLWEETDEQIF 742
                  67889999*********************998887775 PP

>> Utp12  Dip2/Utp12 Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.8   2.1   3.7e-21   7.3e-18       2     106 ..     836     937 ..     834     938 .. 0.94

  Alignments for each domain:
  == domain 1  score: 64.8 bits;  conditional E-value: 3.7e-21
                 HHHHHH.HHHSS-TTTHHHHHHCS-CTCHHHHHHHHHHHH.HTTTTHHHHHHHHHHHHHHHHHHHHHSH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Utp12   2 deelleevlekippsdirltvlrLpssyvlkLLeflaerlaeksphlelllrwlkallrvHgsylvaspsdlvpaLrslqkslrerlktlskllglnlg 100
                 +e++l  vl+ki+++++++++l+Lp+  vl L++fl+  +a++s+ ++l++r+l ++l++H++++++s+   +++L++++++lr++l+ +++ +g+nl+
  KHJ34579.1 836 EEHVLA-VLQKIRAAELDDALLVLPFASVLALFRFLEI-FATRSMDIQLTCRVLLFMLKAHHRQIISSK-IIKATLQTIRSNLRQVLNRQKSEIGFNLA 931
                 455666.*******************************.66****************************.7**************************** PP

                 HHHHHH CS
       Utp12 101 rLdyll 106
                 + + ++
  KHJ34579.1 932 AFKVIS 937
                 998875 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.0   0.1    0.0048       9.6     167     217 ..      90     143 ..      61     228 .. 0.59
   2 ?   -2.2   0.0      0.76   1.5e+03     261     299 ..     240     274 ..     236     277 .. 0.75
   3 ?   -0.1   0.0      0.18   3.6e+02      65     135 ..     284     356 ..     265     391 .. 0.65
   4 !   12.0   0.1   3.7e-05     0.074     138     219 ..     388     469 ..     379     477 .. 0.81
   5 ?    3.6   0.0     0.013        26     183     220 ..     514     552 ..     493     573 .. 0.80
   6 !    4.6   0.0    0.0065        13     189     216 ..     578     605 ..     558     610 .. 0.83
   7 ?   -2.1   0.0      0.72   1.4e+03     255     282 ..     628     655 ..     617     691 .. 0.71
   8 ?    2.8   0.0     0.023        45     179     223 ..     699     748 ..     684     753 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0048
    Ge1_WD40 167 ygsgelsveeiee..gllkieeh.sliveaafspdGtalatasedGevkffqvy 217
                 y+ g+++v + ++   ++k++ h s+i++  f   Gt la  s+d  + ++ + 
  KHJ34579.1  90 YEDGSIRVWDFKTstIIVKFNGHrSEITTLKFDGSGTKLASGSKDTDIILWDLI 143
                 44455555554442256788888569*******************999998754 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.76
    Ge1_WD40 261 tgadnnselklWscelWtClqtikfapsiesslkaevlk 299
                 tg  n+ el +Ws +   C+  i+++ +++++++++ lk
  KHJ34579.1 240 TG-GNDGELNIWSID---CMGLIQYTKKLNTTVDNHFLK 274
                 44.36789****985...888888888888888777776 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.18
    Ge1_WD40  65 kgevldlafahvsskillavdekgslfvykveeve...skllvslllkveapietvvsesdrviWCPyipeeda 135
                 +++++d+ f ++ ++ ++   ++ s+ +++++++e   + l  ++  k e++ ++  +e++ ++    ip+ed 
  KHJ34579.1 284 RSKIRDIRFHFS-HNYFAVHGNEKSVELWRIRSEEeikKSLARRRRRKREKKNDNNEKEISEISLNQNIPDEDF 356
                 7899****9665.5567777888999999998754222344444445555555566666666766666666664 PP

  == domain 4  score: 12.0 bits;  conditional E-value: 3.7e-05
    Ge1_WD40 138 sdddeaskllvltrgdkaeiwsvdmiaskygsgelsveeieegllkieehs.liveaafspdGtalatasedGevkffqvyle 219
                 +++ +a ++lv t +++ e++++ +  +  ++++  ++  ++  +++  h   i   ++s+d   +a as +Ge+k + v   
  KHJ34579.1 388 NKASKAMQILVATTNNQLEVYNIMTKDKLGKKTNEIPDYSRSLSVELPGHRaDIRALSLSSDDRMVASAS-NGELKVWNVRTR 469
                 56678899***************7766665566666777788999**9995499999*******999887.69****999765 PP

  == domain 5  score: 3.6 bits;  conditional E-value: 0.013
    Ge1_WD40 183 kieeh.sliveaafspdGtalatasedGevkffqvyled 220
                 +i+ h s i    + p+G +l   s+d +vkf+  ++ +
  KHJ34579.1 514 RIKAHeSAIWALQVHPNGQSLISGSADKTVKFWNFNVIQ 552
                 6777746899999********************988765 PP

  == domain 6  score: 4.6 bits;  conditional E-value: 0.0065
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqv 216
                  i +  fspd   +a+a  d +vk f v
  KHJ34579.1 578 DILSVRFSPDARLIAIALLDSTVKVFFV 605
                 588899******************9976 PP

  == domain 7  score: -2.1 bits;  conditional E-value: 0.72
    Ge1_WD40 255 fWrfaitgadnnselklWscelWtClqt 282
                 f   +i +++++++++lW  +   C ++
  KHJ34579.1 628 FDSKLIVTCSADKNIRLWGLDFGDCRKA 655
                 5555677888889999999888888765 PP

  == domain 8  score: 2.8 bits;  conditional E-value: 0.023
    Ge1_WD40 179 egllkieehsliveaafspdGtalatasedGevkff.....qvyledeee 223
                 +    +++h +i   a+s  G  l  as+d  ++++     q++le+e+e
  KHJ34579.1 699 QIQRLVNHHGEIWAIAVSNSGKFLVSASHDKSIRLWeetdeQIFLEEEKE 748
                 4455578899*************************977777788877655 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.7   0.0   0.00099         2      83     151 ..      74     146 ..      55     209 .. 0.67
   2 ?   -2.5   0.0       1.2   2.4e+03       2      42 ..     225     265 ..     224     269 .. 0.82
   3 ?   -3.7   0.0         3     6e+03       6      35 ..     290     319 ..     286     320 .. 0.75
   4 ?    1.7   0.0     0.064   1.3e+02     132     179 ..     451     498 ..     395     554 .. 0.56
   5 !    9.3   0.1   0.00032      0.63       3      54 ..     621     672 ..     619     715 .. 0.91

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00099
   WD40_like  83 edistvkviddklliGtnkGsiyvfskdl.qleevllgqsseIkeikie..nnkiysLs.esafivfdlfsqn 151
                  +is+ + + d +++G + Gsi v++    ++   + g+ seI  +k +    k+ s s ++  i +dl+ + 
  KHJ34579.1  74 TAISKSNADRDIFAVGYEDGSIRVWDFKTsTIIVKFNGHRSEITTLKFDgsGTKLASGSkDTDIILWDLIDEV 146
                 579999999**************965554044445889*******9987332344444413455666666554 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.2
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlkleslesvsivesfe 42 
                 e +si i ++g   + Gg+d ++ + +++   +++  ++++
  KHJ34579.1 225 ECWSIGIFPDGAGCITGGNDGELNIWSIDCMGLIQYTKKLN 265
                 6788999999999999*****99999999888887776665 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 3
   WD40_like   6 idiskkgslilyGgkddkctvlkleslesv 35 
                 i + +  +++++ g+++ + +  ++s+e++
  KHJ34579.1 290 IRFHFSHNYFAVHGNEKSVELWRIRSEEEI 319
                 556677788888888888888888887766 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.064
   WD40_like 132 nkiysLsesafivfdlfsqnieykisvkdiktfeiienkdilligteg 179
                  ++ s s+ ++ v+++ + n  +  +   + + + ++   il++gt++
  KHJ34579.1 451 RMVASASNGELKVWNVRTRNCIRTFECGYALCCSFLPGDKILVVGTKT 498
                 333333333344444444333333333333333333333333333332 PP

  == domain 5  score: 9.3 bits;  conditional E-value: 0.00032
   WD40_like   3 iYsidiskkgslilyGgkddkctvlkleslesvsivesfedSvifvkllddd 54 
                 + ++dis++++li+  + d+++++  l+ ++    +   +dS++ v ++ ++
  KHJ34579.1 621 VLNMDISFDSKLIVTCSADKNIRLWGLDFGDCRKAFFAHQDSILQVAFIRNN 672
                 7799*********************************************998 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.012        24     224     256 ..      77     109 ..      65     138 .. 0.76
   2 ?   -0.6   0.0       0.2     4e+02     229     255 ..     191     217 ..     163     227 .. 0.86
   3 ?   -3.6   0.0       1.5   3.1e+03     239     313 ..     244     317 ..     243     321 .. 0.63
   4 !   10.2   0.0   0.00011      0.21     233     258 ..     453     477 ..     436     486 .. 0.82
   5 ?    0.7   0.0      0.08   1.6e+02     220     252 ..     625     652 ..     598     688 .. 0.80
   6 ?   -0.6   0.0       0.2   3.9e+02     223     257 ..     713     746 ..     705     768 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.012
                 .....TTTEEEEEETT-EEEEEETTTTEEEEEE CS
      Nup160 224 avveigqtylfalsrdgkLrvWnlltgkclati 256
                 + +++++++ ++ + dg +rvW+ +t +++  +
  KHJ34579.1  77 SKSNADRDIFAVGYEDGSIRVWDFKTSTIIVKF 109
                 3334388888888*************9988665 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.2
                 TTTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 229 gqtylfalsrdgkLrvWnlltgkclat 255
                  + +l++   d  +++W++++  c++t
  KHJ34579.1 191 SERFLLTTGKDALIKLWDIESRHCIET 217
                 6789999999**************998 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 1.5
                 T-EEEEEETTTTEEEEE.EE--.-SSSTTS--SSEESEEESSSSEEEE..............E--GGG-EEEEEEEEEEE CS
      Nup160 239 dgkLrvWnlltgkclat.idllrdeeaqdessskstldpaesslirvs....dggqsylvvtyspssggefkvwkvkked 313
                 dg+L +W+++ + ++   + l+   ++ d+   ks +  + + ++++        + y++v+    ++++  +w++++e 
  KHJ34579.1 244 DGELNIWSIDCMGLIQYtKKLN---TTVDNHFLKSRGTIQCQGRSKIRdirfHFSHNYFAVHG---NEKSVELWRIRSEE 317
                 8889999998877776646666...44444444444444444444444446677788888855...77888888888775 PP

  == domain 4  score: 10.2 bits;  conditional E-value: 0.00011
                 EEEEETT-EEEEEETTTTEEEEEEE- CS
      Nup160 233 lfalsrdgkLrvWnlltgkclatidl 258
                 +++  ++g+L+vWn++t  c++t+++
  KHJ34579.1 453 VAS-ASNGELKVWNVRTRNCIRTFEC 477
                 444.469****************987 PP

  == domain 5  score: 0.7 bits;  conditional E-value: 0.08
                 EEET.....TTTEEEEEETT-EEEEEETTTTEE CS
      Nup160 220 dvavavveigqtylfalsrdgkLrvWnlltgkc 252
                 d ++     +++++++ s d+++r+W l+ g c
  KHJ34579.1 625 DISF-----DSKLIVTCSADKNIRLWGLDFGDC 652
                 3333.....9999*************9876655 PP

  == domain 6  score: -0.6 bits;  conditional E-value: 0.2
                 T.....TTTEEEEEETT-EEEEEETTTTEEEEEEE CS
      Nup160 223 vavveigqtylfalsrdgkLrvWnlltgkclatid 257
                 +av++   ++l+++s d+ +r+W  ++ ++    +
  KHJ34579.1 713 IAVSN-SGKFLVSASHDKSIRLWEETDEQIFLEEE 746
                 66777.7889*************877776665554 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.73   1.5e+03     124     153 ..      92     123 ..      68     132 .. 0.70
   2 ?   -0.1   0.0      0.35     7e+02      72     148 ..     192     268 ..     189     279 .. 0.70
   3 !   10.1   0.0   0.00027      0.53      55     161 ..     373     495 ..     357     502 .. 0.63
   4 ?   -0.7   0.0      0.56   1.1e+03     124     159 ..     498     535 ..     491     551 .. 0.64

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.73
                 S-EEEEEETTTTEEEEEEE-TT-..-EEEE-T CS
       eIF2A 124 aGeleiwdvkkkkkiakaeaana..tlvewsp 153
                  G++ +wd k+ + i k++   +  t+++++ 
  KHJ34579.1  92 DGSIRVWDFKTSTIIVKFNGHRSeiTTLKFDG 123
                 58999999998888888765443114455554 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.35
                 S-EEEEESSSSCEEEEEECSCEEEEEEEEES--EEEE-....TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--E CS
       eIF2A  72 kefaviyGkmpakvslfdlkvkviskleeqkrNtiffs....pkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanatl 148
                 ++f++  Gk +a ++l+d + +   +++ ++ N   +s    p g   +++G     Gel+iw  + +  i+ +++ n+t+
  KHJ34579.1 192 ERFLLTTGK-DALIKLWDIESRHCIETHVAQSNGECWSigifPDGAGCITGG---NDGELNIWSIDCMGLIQYTKKLNTTV 268
                 566666665.667777777777777777777776666544445565555554...46999999999999999999999886 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.00027
                 CEESSS.EEEEEE..-TTSS-EEEEESSSSCEEEEEEC..S................CEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETT CS
       eIF2A  55 elkkegpihdvaW..spkskefaviyGkmpakvslfdl..k................vkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvk 133
                 ++++ g++  v W  ++ sk + ++    +++ ++++   k                ++v    +++   ++  s+ +++v+ a     +Gel++w+v 
  KHJ34579.1 373 NMRTSGKVRSVDWvkNKASKAMQILVATTNNQLEVYNImtKdklgkktneipdysrsLSVELPGHRADIRALSLSSDDRMVASAS----NGELKVWNVR 467
                 5666666666666333335556666666666666666533133433434444433222222222333445677788888888886....6888****** PP

                 TTEEEEEEE-TT--EEEE-TTSSEEEEE CS
       eIF2A 134 kkkkiakaeaanatlvewspdgryvlTa 161
                 ++++i ++e+  a  + + p ++ ++  
  KHJ34579.1 468 TRNCIRTFECGYALCCSFLPGDKILVVG 495
                 ********************99988755 PP

  == domain 4  score: -0.7 bits;  conditional E-value: 0.56
                 S-EEEEEETTTTEEEEEEE-TT--E..EEE-TTSSEEE CS
       eIF2A 124 aGeleiwdvkkkkkiakaeaanatl..vewspdgryvl 159
                  G+le++dv +   + +++a ++    ++ +p+g+ ++
  KHJ34579.1 498 TGDLELFDVASAAMLDRIKAHESAIwaLQVHPNGQSLI 535
                 58888888888888888877776641134456665554 PP

>> Nucleoporin_N  Nup133 N terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       0.5   9.9e+02     214     233 ..      84     103 ..      71     114 .. 0.62
   2 ?   -3.5   0.0       1.6   3.2e+03     199     244 ..     111     156 ..      99     164 .. 0.75
   3 ?   -0.0   0.1      0.14   2.8e+02     216     231 ..     396     411 ..     235     502 .. 0.64
   4 ?    3.3   0.1     0.014        28     197     239 ..     515     556 ..     386     605 .. 0.77
   5 ?   -1.0   0.0      0.28   5.6e+02     206     231 ..     623     648 ..     601     691 .. 0.81
   6 ?   10.4   0.2   9.7e-05      0.19     199     272 ..     705     778 ..     676     786 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.5
                    CEEEEEETTSEEEEEEEETT CS
  Nucleoporin_N 214 rilytlsskgvirvydlsas 233
                     i  +  ++g irv+d+ +s
     KHJ34579.1  84 DIFAVGYEDGSIRVWDFKTS 103
                    44444568888888888743 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.6
                    --GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCEE-EEEEEEE CS
  Nucleoporin_N 199 sereeivqlridssrrilytlsskgvirvydlsasngesslksdid 244
                      r+ei+ l+ d s   l + s +  i  +dl  + g ++l++++d
     KHJ34579.1 111 GHRSEITTLKFDGSGTKLASGSKDTDIILWDLIDEVGLFKLRGHKD 156
                    3788888888888888888888888888888886666666666655 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.14
                    EEEEETTSEEEEEEEE CS
  Nucleoporin_N 216 lytlsskgvirvydls 231
                    + ++++   ++vy++ 
     KHJ34579.1 396 ILVATTNNQLEVYNIM 411
                    2233333333333333 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.014
                    ----GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCEE-EE CS
  Nucleoporin_N 197 gasereeivqlridssrrilytlsskgvirvydlsasngessl 239
                    ++  +++i++l +++  + l++ s+++++++++++   +e+ l
     KHJ34579.1 515 IKAHESAIWALQVHPNGQSLISGSADKTVKFWNFN-VIQEPIL 556
                    56688999999999999999999999999999987.4344555 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 0.28
                    EEEEECCTCEEEEEETTSEEEEEEEE CS
  Nucleoporin_N 206 qlridssrrilytlsskgvirvydls 231
                     + i+  +++++t s++++ir + l 
     KHJ34579.1 623 NMDISFDSKLIVTCSADKNIRLWGLD 648
                    566667779**************987 PP

  == domain 6  score: 10.4 bits;  conditional E-value: 9.7e-05
                    --GG-EEEEEEECCTCEEEEEETTSEEEEEEEETTCE.E-EEEEEEEHHHHHHHH.HHSCHTTTCGCTTT-EEEE CS
  Nucleoporin_N 199 sereeivqlridssrrilytlsskgvirvydlsasng.esslksdidirqilleaitesliasaplaskslkild 272
                    + + ei+++++++s + l+++s ++ ir ++ + +++   + ++++++++ + +++++sl + +   + +l i++
     KHJ34579.1 705 NHHGEIWAIAVSNSGKFLVSASHDKSIRLWEET-DEQiFLEEEKEKELEELFESTLATSLEKDSEEDNTELGIVS 778
                    67899*************************966.65557788888999999999999988888877777777776 PP

>> Vmethyltransf_C  Viral methyltransferase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1     0.093   1.9e+02     126     173 ..     270     317 ..     255     390 .. 0.87
   2 ?   10.0   0.7   0.00023      0.46      85     134 ..     734     783 ..     723     796 .. 0.89
   3 ?   -3.2   0.0       2.6   5.1e+03      90     120 ..     884     914 ..     869     955 .. 0.71

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.093
  Vmethyltransf_C 126 GavlagkslkkskkksaseDlldGeshlgstlkaeekvvekeeivskq 173
                       ++l+++   + + +s  +D+    sh + +++ +ek ve  +i s++
       KHJ34579.1 270 NHFLKSRGTIQCQGRSKIRDIRFHFSHNYFAVHGNEKSVELWRIRSEE 317
                      468899999999999*****888999*************999888765 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00023
  Vmethyltransf_C  85 leelDvkvklyeekerekervsrsivseklgvlasvkdtelGavlagksl 134
                       ee D+++ l eeke+e e++ +s  +  l   ++ ++telG v +  s+
       KHJ34579.1 734 WEETDEQIFLEEEKEKELEELFESTLATSLEKDSEEDNTELGIVSKQTSS 783
                      5899**************************************99876655 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 2.6
  Vmethyltransf_C  90 vkvklyeekerekervsrsivseklgvlasv 120
                       +v+l+  k + ++ +s +i+   l  + s+
       KHJ34579.1 884 CRVLLFMLKAHHRQIISSKIIKATLQTIRSN 914
                      5577888888888888888866666555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (969 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1083  (0.0604049); expected 358.6 (0.02)
Passed bias filter:                      553  (0.0308439); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.88u 0.29s 00:00:01.17 Elapsed: 00:00:00.49
# Mc/sec: 5990.60
//
Query:       KHJ34580.1  [L=478]
Description: putative dihydroorotate reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-67  226.1   0.1    4.9e-66  222.9   0.1    1.9  1  DHO_dh    Dihydroorotate dehydrogenase
     0.0014   17.7   0.0      0.053   12.5   0.1    2.4  2  FMN_dh    FMN-dependent dehydrogenase
  ------ inclusion threshold ------
       0.04   13.3   0.0      0.061   12.7   0.0    1.3  1  NMO       Nitronate monooxygenase


Domain annotation for each model (and alignments):
>> DHO_dh  Dihydroorotate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  222.9   0.1   8.2e-70   4.9e-66       2     295 .]     121     475 ..     120     475 .. 0.86

  Alignments for each domain:
  == domain 1  score: 222.9 bits;  conditional E-value: 8.2e-70
                 G-EEETTEEESSSEEE-TTSSTTSSSHHHHHCTTSSEEEEEEE-SS-B--S-S--EEEETTCTEEEE---S-BS-HHHHHHHHHHHHHHHHCC...... CS
      DHO_dh   2 latkvlglkfknpiglAaGfdkegeeilkllklgfgaieigsvtpkpqeGnpkPrvfrlkedrsvlNslGlnneGldavlekllkrrkeqeek...... 94 
                 l+++v+g+++knpig +aG+dk +e  ++l +lg +++e+g vtp  qeGnpkPrvfrl++ rs++N++Gln++G++ v+++l++r++  + +      
  KHJ34580.1 121 LSVTVFGQELKNPIGTSAGIDKLAEIPDALFALGPAIVEVGGVTPIYQEGNPKPRVFRLPSLRSLINRYGLNSNGAEDVAKRLRERVRLFAYRngygvg 219
                 789**********************************************************************************9987555589**** PP

                 .......................CEEEEEEE-TTS.....S.HHHHHHHHHHHHGGGESEEEEES-SCTCCTSCCCGCHHHHHHHHHHHHHHHH..... CS
      DHO_dh  95 ......................kelginlskakkt.....enavddyvevvrkigpfadilelNvSsPntpglrdlqekeelkaillkvvkevs..... 161
                                       k l++ ++k+k+t     e +  dyv +v+k++p+adil++NvSsPntpglr+lq+ e l++il  vv+++      
  KHJ34580.1 220 teaenlilngyaqvppgslvegKLLAVQVAKNKDTndedlEAVKRDYVFCVEKLAPYADILVVNVSSPNTPGLRELQNVEPLTYILRGVVNAARavnrk 318
                 **********************9999******9996544444567*********************************************999989998 PP

                 .SSEEEEEE-SSSSHHHHHHHHHHHH.HHTECEEEE...BSEE--C.....TTCCGCCCCTTSSEEEEEGGGHHHHHHHHHHHHHHTT........... CS
      DHO_dh 162 .kvpvlvKlaPdltdeekkdiadvll.elkldgiivtNttvqrlai.....dlkseknvkanktGGlsGkalkdialkvirelykrlk........... 242
                   + v+vK++Pd + ee+   ++ +    ++dg+iv+Ntt qr  i      + +e+ +  n+tGGlsG+ + +  l+++ + ++ l+           
  KHJ34580.1 319 tFPRVMVKVSPDENSEEQVTGIVAAIwDSGVDGVIVGNTTKQRYDIlppntIIPQEERRIFNETGGLSGPMMFEKTLELVKRYRALLDqgppmtqnsqn 417
                 7789********998877665555555***************98542222134455555556******************8865543311111111111 PP

                 ....T.S-.EEEESS--SHHHHHHHHHHTECEEEESHHHHHHGTCHHHHHHHHHHHHH CS
      DHO_dh 243 ....keip.iIgvGGiesgeDalekieaGAslvqvytalvfegpkiakkikkeleelL 295
                     +e + i ++GGi+ g+ +le + aGAs+ q+yta+v+ g   + +ikke+ e+L
  KHJ34580.1 418 sdfsSEAKvIFASGGITNGQQVLEILSAGASIAQIYTAMVYGGLGTVTRIKKEIREEL 475
                 111134552569******************************************9986 PP

>> FMN_dh  FMN-dependent dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.8   0.0    0.0083        50      47      72 ..     120     144 ..      85     161 .. 0.81
   2 !   12.5   0.1   8.9e-06     0.053     272     326 ..     425     475 ..     341     478 .] 0.75

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.0083
                 B--EEETTEEESSSEEE--BSTGGGT CS
      FMN_dh  47 dlsttllGqklslPvliaPvglakla 72 
                  ls+t++Gq+l+ P+++++ g+ kla
  KHJ34580.1 120 GLSVTVFGQELKNPIGTSA-GIDKLA 144
                 699************9874.666666 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 8.9e-06
                 S-EEEESS--SHHHHHHHHHTT-SEEEESHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      FMN_dh 272 ievlvDgGirrGsDvlkAlalGAdavllGRpflyglaagGeeGvervleilrael 326
                   ++++gGi++G+ vl  l  GA++  +  +++yg    G   v+r+ + +r+el
  KHJ34580.1 425 KVIFASGGITNGQQVLEILSAGASIAQIYTAMVYG----GLGTVTRIKKEIREEL 475
                 458899********************999999998....5555666666666655 PP

>> NMO  Nitronate monooxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0     1e-05     0.061     196     227 ..     427     458 ..     380     473 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1e-05
         NMO 196 viAaGGiidrrgvaaaLalGAsgvqigtrfLl 227
                 + A GGi ++++v  +L++GAs +qi t+++ 
  KHJ34580.1 427 IFASGGITNGQQVLEILSAGASIAQIYTAMVY 458
                 78**************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (478 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.30s 00:00:00.86 Elapsed: 00:00:00.47
# Mc/sec: 3083.53
//
Query:       KHJ34581.1  [L=319]
Description: putative uv-damaged dna-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    7.9e-14   52.2   0.0    1.5e-13   51.3   0.0    1.4  1  R3H-assoc  R3H-associated N-terminal domain
     0.0043   17.0   0.0       0.71    9.9   0.0    2.4  2  R3H        R3H domain
  ------ inclusion threshold ------
      0.043   13.7   1.5       0.11   12.4   1.5    1.6  1  DP         Transcription factor DP


Domain annotation for each model (and alignments):
>> R3H-assoc  R3H-associated N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   0.0   2.5e-17   1.5e-13       3     131 ..      66     182 ..      64     184 .. 0.86

  Alignments for each domain:
  == domain 1  score: 51.3 bits;  conditional E-value: 2.5e-17
   R3H-assoc   3 pirrdsafrreallkgkeGsRrrrRweNdrlLkeLlerleeieedemdesdaepplpsdfeklptseen.......aelWddflnlseeeqerilasle 94 
                  +++ ++ r++ + +g+ G+Rrr+R+eN+++L+                ++++pplp d+e+ pt++++       a+lWd+ +++  ee+ r  +sl 
  KHJ34581.1  66 DLLNVIQSREDLVNRGRVGNRRRKRYENSNFLNL---------------PNYQPPLPLDWEVYPTHPVYhdvpyylAPLWDSKFQQISEERIRSKSSLP 149
                 567788999999**********************...............**********************************************9*99 PP

   R3H-assoc  95 esekkrkkkektpvsgedkresaeaafqridrrlRaa 131
                 +  k ++  +     + +k++ a+   q++  r+Ra+
  KHJ34581.1 150 PHGKVSHDLK----LTLKKSKGARYILQQLEDRIRAF 182
                 9999999884....44444455566666666666665 PP

>> R3H  R3H domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.4   0.0    0.0061        36       3      19 ..     172     188 ..     171     200 .. 0.77
   2 !    9.9   0.0   0.00012      0.71      27      56 ..     250     280 ..     236     283 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0061
                 HHHHHHHHHHHHH-S-- CS
         R3H   3 llrvekklaefvkdtgr 19 
                 l+++e++++ f++ +++
  KHJ34581.1 172 LQQLEDRIRAFIQLQNE 188
                 79**********98853 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00012
                 -SHHHHHHHHHHHHSSEEEEEE-.-SS-SEE CS
         R3H  27 ssyeRriiHelaeaygleseSvG.eepkRrv 56 
                 s + R +i elae+ygl ++ +  +++k +v
  KHJ34581.1 250 SGFMRWLIYELAEYYGLNTYRESpNGDKSCV 280
                 56789**************988766677666 PP

>> DP  Transcription factor DP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.5   1.8e-05      0.11       4      60 ..      44     100 ..      41     102 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.8e-05
          DP   4 eeleeekekreerikkkkeqlqeLilqqvalknLvqrNreleekkgapsensviqLP 60 
                 ++ ++ k k +++i++k++  ++L   + + ++Lv+r r  ++++++ +++++++LP
  KHJ34581.1  44 QDRHTSKDKARSKIQQKNKIREDLLNVIQSREDLVNRGRVGNRRRKRYENSNFLNLP 100
                 566788999***********************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       808  (0.0450667); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2377.48
//
Query:       KHJ34582.1  [L=260]
Description: hypothetical protein EV44_g2145 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-06   28.3   0.1      6e-06   26.5   0.0    1.9  2  BTB       BTB/POZ domain
  ------ inclusion threshold ------
      0.076   13.4   0.1       0.25   11.7   0.0    1.9  2  BTB_2     BTB/POZ domain


Domain annotation for each model (and alignments):
>> BTB  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   6.7e-10     6e-06      13      75 ..      53     115 ..      51     125 .. 0.89
   2 ?   -2.3   0.0      0.55     5e+03      89     102 ..     161     174 ..     148     178 .. 0.71

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 6.7e-10
                 EEEEETT.TEEEEE-HHHHHHH-HHHHHHHTSTTTTTCCCEEEEETTSGHHHHHHHHHHHHHSE CS
         BTB  13 vtlvvgd.gkefkahkavLaarSpyFkalftskeieessvseielddvepeafealLefiYtge 75 
                 vt+ vg  g+ f ah  +L+  Sp+F + f++ ++  +++++i l d epe+f  +Le++Y g 
  KHJ34582.1  53 VTITVGReGRIFAAHEDILSL-SPFFAVVFKESTFIIAEKKKISLLDEEPEIFSCVLEYLYKGD 115
                 7899998899999****9985.9**********777777779*******************986 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.55
                 HHHHHHT-HHHHHH CS
         BTB  89 aaadllqiprlkka 102
                  aa+++ +++lk++
  KHJ34582.1 161 CAAEKYGLDELKNI 174
                 34588888888776 PP

>> BTB_2  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.94   8.4e+03      26      48 ..      14      36 ..       6      48 .. 0.63
   2 ?   11.7   0.0   2.8e-05      0.25       2      63 ..      54     114 ..      53     124 .. 0.83

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.94
                TSSGG....GGEETTTTEEEE-S CS
       BTB_2 26 gkllkteelddydeetneyffDR 48
                +k++k++++++++++t+   + R
  KHJ34582.1 14 KKITKVTKTNSFQDKTKLTNIKR 36
                55555555666666665555555 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 2.8e-05
                 EEEET..TEEEEEEHHHHHTSTTSTTTSSGG....GGEETTTTEEEE-S-HHHHHHHHHHHHS. CS
       BTB_2   2 klnVg..GtrfetskstLsrkpdtlLgkllkteelddydeetneyffDRspklFetiLnyyrtg 63 
                 ++ Vg  G++f+ ++++Ls     +++ + k++ +    e+++  ++D +p++F+ +L+y+ +g
  KHJ34582.1  54 TITVGreGRIFAAHEDILS--LSPFFAVVFKES-TFIIAEKKKISLLDEEPEIFSCVLEYLYKG 114
                 5666666999999999999..677899999955.88888889999****************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       676  (0.0377043); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2017.08
//
Query:       KHJ34583.1  [L=313]
Description: hypothetical protein EV44_g1930 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (313 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.59
# Mc/sec: 1602.51
//
Query:       KHJ34584.1  [L=442]
Description: hypothetical protein EV44_g1168 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (442 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 3486.83
//
Query:       KHJ34585.1  [L=533]
Description: putative arginine permease can1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   2.9e-132  441.7  50.4   3.3e-132  441.5  50.4    1.0  1  AA_permease    Amino acid permease
      3e-28   98.8  55.3      4e-28   98.4  55.3    1.1  1  AA_permease_2  Amino acid permease


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  441.5  50.4  3.6e-136  3.3e-132       1     477 [.      37     499 ..      37     501 .. 0.97

  Alignments for each domain:
  == domain 1  score: 441.5 bits;  conditional E-value: 3.6e-136
  AA_permease   1 hvlvialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpelGfviGlnylfswitvlaleltaas 98 
                  h+++ia+gg iGtglf+g+g+ +++aGp+gallay ++g++++ v++slge+at++p +g+f++ya+rf++p+lGf++G++y+fsw+t++alelta +
   KHJ34585.1  37 HMQMIAIGGTIGTGLFIGSGSSIATAGPVGALLAYTIVGTIVYSVINSLGEMATYIPITGAFTAYATRFIHPSLGFAMGWIYWFSWATTFALELTATG 134
                  99************************************************************************************************ PP

  AA_permease  99 iliqfwelvtdlpkawvtgavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkgagfrflgdngsifknnlppgfakeeeg 196
                   +iq+w  + d+    +++ vf+++l++in++ v  +ge+ef+l+++k++++++f+++ i++ ag+++n   gf+ ++++g+++   +++   +++ g
   KHJ34585.1 135 LVIQYWAPYLDIG---IFIGVFWLLLTVINFFPVAIFGEFEFWLSSVKVVTVVGFLLFAICIDAGAGQNGYLGFSTWKNPGAFAPYLITS---SPALG 226
                  ******7777776...8899********************************************99988777**********55555555...5**** PP

  AA_permease 197 afknfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasa.aspfvifikesgvsvlaplin 293
                   f +f +v++++ f+++G+elv+i+agE+++P+k++P ai+++++ri+if+v s+++igllvp+++++ll+++ +a aspfv++ k +gv+vl+ +in
   KHJ34585.1 227 KFIGFWAVLIQAGFSYQGTELVGIAAGECENPRKNVPAAIRKTFFRILIFFVTSIFFIGLLVPYDNKSLLSGASDAsASPFVVAAKLAGVKVLPEIIN 324
                  ***********************************************************************9999999******************** PP

  AA_permease 294 aviltaalssansslysasRvlyslakdglaPkvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsylrfR 391
                   v+l  +ls+ans +ys+sRvl  la d+ aP ++++ s++gvP++a++l++ ++lla+l++s + +  +vfn+l++is ++g+ivw +i+++++ f 
   KHJ34585.1 325 TVLLFVILSAANSNVYSGSRVLLGLAADDFAPEFVTRTSRSGVPYVAVALTSGFGLLAFLNESDQGG--YVFNWLMNISSIAGFIVWACISFCHITFI 420
                  *******************************************************************..***************************** PP

  AA_permease 392 kalkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilvgvklhvknkrpql 477
                  + l ++++    l+f a ++ ++++++l+++++i+l+++++ +l+       w+a++f+  y++++lf+++++g++++ k+++ +l
   KHJ34585.1 421 RVLAARNIPRHTLPFCALGGEWFAWYGLLFNLLIILTQGFTSFLP-------WSATNFFTCYISIMLFVMLFFGHNIFMKTRFVKL 499
                  *********************************************.......****************************998775 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.4  55.3   4.4e-32     4e-28       8     421 ..      40     484 ..      34     488 .. 0.79

  Alignments for each domain:
  == domain 1  score: 98.4 bits;  conditional E-value: 4.4e-32
  AA_permease_2   8 alvigsvigsgifvkn..laasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkvaflsawfnwfayvpvlasilsvaas 101
                    +++ig +ig+g f+ +  ++a++gp+ +l   ++v+ ++++v+  + E+++ +p  g    y+ +++++ ++f ++w++wf+++ ++a+ l++ + 
     KHJ34585.1  40 MIAIGGTIGTGLFIGSgsSIATAGPVGALLAYTIVGTIVYSVINSLGEMATYIPITGAFTAYATRFIHPSLGFAMGWIYWFSWATTFALELTATGL 135
                    689***********999999999999666655555555589999*******************************************999999999 PP

  AA_permease_2 102 yllnalgpdlqgntwltyliaiaili.lvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl..stetdt........ffpng 186
                     +++ ++p l       ++i+i++++ l+++in + + + + + ++l  +k++ +++ ++++++++  g g++       +++        +  + 
     KHJ34585.1 136 VIQY-WAPYL------DIGIFIGVFWlLLTVINFFPVAIFGEFEFWLSSVKVV-TVVGFLLFAICIDAGAGQNGYlgFSTWKNpgafapylI--TS 221
                    9999.55654......467777777625789*********************6.65555555555544444443356333333444333221..22 PP

  AA_permease_2 187 wpgv.........llgllivlwsfdGfesaanvsee..vkkkdvpkaifigllivlvlyllvniaflgvvpddei....anlsnlgsvaalffeav 267
                       +         +++l ++ +s++G e +   + e  +++k+vp ai   +  +l++++   +++   vp d+       ++ + s++ + ++ +
     KHJ34585.1 222 ---SpalgkfigfWAVLIQAGFSYQGTELVGIAAGEceNPRKNVPAAIRKTFFRILIFFVTSIFFIGLLVPYDNKsllsGASDASASPFVVAAKLA 314
                    ...1333444455999********************777779******9999888888777766666678877774454334447889******** PP

  AA_permease_2 268 ggkvvaiivvilialsllgaintavigssrvlealardgvlPrffakvnkfgspiraiiltaivslillllfllas....saaynfllsvsslgli 359
                    g kv+  i++ ++ +++l a+n+ v++ srvl  la d++ P+f  ++++ g p++a+ lt  + l+ +   l       +  +n+l+++ss++ +
     KHJ34585.1 315 GVKVLPEIINTVLLFVILSAANSNVYSGSRVLLGLAADDFAPEFVTRTSRSGVPYVAVALTSGFGLLAF---LN-EsdqgGYVFNWLMNISSIAGF 406
                    *****************************************************************5544...32.22466779************* PP

  AA_permease_2 360 isyllliigal.ilrkkrphl.kr..............pgkilvaiigalfllfllvalffppkgpatqssliytiil 421
                    i+++ ++++ + ++r+   +  +r              ++  l++++++l+  f+ ++++  ++  + + s+++ ++l
     KHJ34585.1 407 IVWACISFCHItFIRVLAARNiPRhtlpfcalggewfaWYGLLFNLLIILTQGFTSFLPWSATNFFTCYISIMLFVML 484
                    ***999555443777665544466778888888888888888999999999999999999888777777777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       874  (0.0487478); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.38
# Mc/sec: 4158.45
//
Query:       KHJ34586.1  [L=862]
Description: putative glycosyltransferase family 20 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.3e-143  479.2   0.0   1.9e-143  478.6   0.0    1.1  1  Glyco_transf_20  Glycosyltransferase family 20
    1.3e-69  233.9   0.0    1.9e-69  233.3   0.0    1.3  1  Trehalose_PPase  Trehalose-phosphatase
    8.9e-06   25.6   0.0    9.8e-05   22.2   0.0    2.1  2  Hydrolase_3      haloacid dehalogenase-like hydrolase
  ------ inclusion threshold ------
        0.1   12.8   0.0         18    5.6   0.0    2.8  3  Hydrolase        haloacid dehalogenase-like hydrolase


Domain annotation for each model (and alignments):
>> Glyco_transf_20  Glycosyltransferase family 20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  478.6   0.0  4.2e-147  1.9e-143      73     472 ..     172     580 ..     150     581 .. 0.91

  Alignments for each domain:
  == domain 1  score: 478.6 bits;  conditional E-value: 4.2e-147
                      CCCCEEEEEE-HHHHHHHCCC...........HHHHCHHHHHTT-GG....G----HHHHHHHHHHHHHHHHHHHCC--TT-EEEEESGGGTTH CS
  Glyco_transf_20  73 ekfsvvpvflsdekveeyyng...........fsksvLWpllHYklpdsseekefersawdaYvkvnklFAdkiveeikdgdliwvhDYhLmll 155
                      + +  vpv+l+d++ e++ +g           f+++ L+ l+HYk + + ++   er+ w++Y ++n+ FA+ i++++k+gd++++hDYhL+ll
       KHJ34586.1 172 KICRTVPVWLQDKQ-ESTADGillkdqtrwrrFAERNLYTLFHYKQN-EATDGITERQLWEDYHHMNQQFANCILKIYKPGDILIIHDYHLFLL 263
                      23557888888433.33333335555566666***************.8999999*************************************** PP

                      HHHHHHCCTTSEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSSEEEECTTEEEEETTEEEEEEE------H CS
  Glyco_transf_20 156 PellRkkledakigfflHiPFPsseifriLpvreeilegllgadliGFhtedyarhFlsccsrllgleveskrggveykgrkvsvkalpigidv 249
                      P++lR+ ++++ i+fflHiPFPsse+ r+Lp+r+eileg lgadl+GF+ ++y rhF+scc+r+lg  ++    gve + rkv v+++pigi+ 
       KHJ34586.1 264 PSMLRHIVPRMYISFFLHIPFPSSELLRCLPRRKEILEGALGADLVGFQSPSYSRHFVSCCTRILGFPTDIM--GVETDVRKVIVGIFPIGINA 355
                      *******************************************************************99999..8******************* PP

                      HHHHHHC.CSCHHHHHHHHHHHHT.TTSEEEEEEEEC-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEEEEB-STTSHH...HHHHHHHHHHHH CS
  Glyco_transf_20 250 erlesal.kkesvsekvkelkerfenkkklilgvDrlDyikGvkqkllaferfLeeypelrgkvvlvqiavpsredvee...yqelekeveelv 339
                      +++e+a+ +++ v+ekv+ l++ +++ +k+i+g+DrlD ++Gv+qk++aferfL++ p+++gkvvl+q+++p++ + e+    ++++k+++e+v
       KHJ34586.1 356 AAVEKAAfENPLVDEKVEALNSLYKG-IKIIVGRDRLDTLRGVSQKMIAFERFLADFPQWQGKVVLIQVTSPTSIEGEAedaGNRITKKISEIV 448
                      ***9986267789***********88.8********************************************99777652346789******** PP

                      HHHHHHH-BTTB-SEEEEES---HHHHHHHHHH-SEEEE--SSBSS-CHHHHHHHCSTTT--EEEEETTBGGGGT-TTTSEEE-TT-HHHHHHH CS
  Glyco_transf_20 340 grINgefgtldytPvvylersldfeeliallaaadvllvtslRdGmnlvakeyvvcqqekkgvLiLSeFaGaaqsLkdaailvNPwdieevaea 433
                       +INg +g+l+++Pv+++ + l++ e++a+l+aad+ l+ts+RdGmn++++eyvvcq++++ +LiLSeF+G+a sLk +ai +NPwd++ v++ 
       KHJ34586.1 449 ANINGTYGSLSFSPVQHYPKYLSQPEYLAILRAADIGLITSVRDGMNTTSLEYVVCQRDRHCPLILSEFSGTAGSLK-HAIHINPWDTSGVSKQ 541
                      *****************************************************************************.57************** PP

                      HHHHHC--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHH CS
  Glyco_transf_20 434 ikeaLkmseeerkkrekkllkqvskhdvqsWaesflsel 472
                      i+ aL+ms ++++  +++l+++v+++++q Wa +fl++l
       KHJ34586.1 542 INAALTMSSDKKAAMHRSLYHHVTTRNIQAWADNFLRRL 580
                      ***********************************9987 PP

>> Trehalose_PPase  Trehalose-phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.3   0.0   4.3e-73   1.9e-69       1     232 [.     614     845 ..     614     846 .. 0.95

  Alignments for each domain:
  == domain 1  score: 233.3 bits;  conditional E-value: 4.3e-73
                      EEETBTTTB---SSGGG--B-TTHHHHHHHHHTTS-..EEEE-SS-HHH.HHHHH---SSEEEEGGGTEEE-TT--EEE-HHHHTTHHHHHHHH CS
  Trehalose_PPase   1 flDydGTlspivedpdaavpssellslLkkLasdpknvvaivSGrslke.eellvkvpelglaaeHGaeirspsgedwenqaevedlewlkevk 93 
                      ++DydGTl+piv dp aa ps+ ++++Lk+La++pkn v+i+SGr++++ ++ l+ + elgl+aeHG+++r p + +wen a   dl+w+ ev 
       KHJ34586.1 614 MFDYDGTLTPIVHDPSAALPSKFMINTLKTLATNPKNSVWIISGRDQAFlQQHLGHIRELGLSAEHGSFLRHPCSLTWENLASLIDLQWQAEVL 707
                      79******************************************************************************************** PP

                      HHHHHHHTTSTT-EEEEETTEEEEE-TT--TT....THHHHHHHHHHHHHHH.--EEEE-SSEEEEE-S---HHHHHHHHHHTS--------EE CS
  Trehalose_PPase  94 eileektertpGsyiEekkfalsvHyrnadde..elqakelaehlesvltdkpdlevtqgkkvvevrpqgvsKGkaverlleslgsadseddfv 185
                      e ++++t++tpG+++E+k++al++Hyr  d+   + qa+e+ +  e+ l +k d+ev++gk+++evrp++ +KG++v+rl+++ + +   +dfv
       KHJ34586.1 708 ETFRRYTQKTPGAFVERKRCALTWHYRPSDPIlgAYQADECRKEIERDLGKKWDIEVMTGKANIEVRPSFINKGEIVKRLISEFDPK---PDFV 798
                      ********************************************999999999********************************99...**** PP

                      EEEE-SSTTHHHHTTS-TT...-EEEEE--TTS---EES-SEEESSH CS
  Trehalose_PPase 186 lciGDdrtDedmFsvlrktkesgvsievsavevgskpskakysldsk 232
                      +c+GDd+tDedmF++l+  +  + +  + +v ++s+++ a+++l+++
       KHJ34586.1 799 FCVGDDFTDEDMFRELKAANLANGHDFIVKVGKSSQATIASWYLPEP 845
                      ******************96444455556666688999999999886 PP

>> Hydrolase_3  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.086   3.8e+02       2      59 ..     614     676 ..     613     695 .. 0.73
   2 !   22.2   0.0   2.2e-08   9.8e-05     153     223 ..     744     815 ..     741     833 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.086
                  EEEIIIIIS-.....TTS---HHHHHHHHHHHH.TTSEEEEE-SS-HHHHHHHHHHCCCCSEEE CS
  Hydrolase_3   2 alDlDGTLln.....sdkkisektkeaikklke.kgikvviATGRslravlpvleelgldlpvi 59 
                  ++D DGTL       s    s+  ++++k l       v i +GR   ++++ l ++  +l + 
   KHJ34586.1 614 MFDYDGTLTPivhdpSAALPSKFMINTLKTLATnPKNSVWIISGRDQAFLQQHLGHIR-ELGLS 676
                  699*****76665533344678889999998763577899999999999999877665.44555 PP

  == domain 2  score: 22.2 bits;  conditional E-value: 2.2e-08
                  HHHHHHHHHHHHCTTTE.EEEEESTTEEEEEETT-SHHHHHHHHHHHCT--GGGEEEEESSGGGHHHHHHSS CS
  Hydrolase_3 153 kldelekelksklnkll.titssskgyleimpkgvsKgtalkklakelnisleeviafGDgeNDieMLeaag 223
                  + de++ke++++l+k+    + ++k ++e+ p  ++Kg+ +k+l++e++ +++ v  +GD+  D  M+   +
   KHJ34586.1 744 QADECRKEIERDLGKKWdIEVMTGKANIEVRPSFINKGEIVKRLISEFDPKPDFVFCVGDDFTDEDMFRELK 815
                  6799***********99444567899******************************************9885 PP

>> Hydrolase  haloacid dehalogenase-like hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.55   2.5e+03      98     138 ..     342     385 ..     222     391 .. 0.82
   2 ?    3.6   0.0     0.015        68       3      20 ..     612     626 ..     611     677 .. 0.82
   3 ?    5.6   0.0    0.0039        18     174     208 ..     779     813 ..     747     815 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.55
                 HHHHHH......TTHHHHHHHHHHTHHBHTTHHHHHHHHHHTTEEEE CS
                 xxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase  98 rtvall......qaralavftiadplkvkpeaaeavasLkaagievv 138
                 r v++       +a a++  ++++p  + +e +ea++sL  +gi+++
  KHJ34586.1 342 RKVIVGifpigiNAAAVEKAAFENP--LVDEKVEALNSLY-KGIKII 385
                 3333337777778888888899999..9999999999987.688765 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.015
                 EEEEESBTTTBCHHHHHH CS
                 xxxxxxxxxxxxxxxxxx RF
   Hydrolase   3 tvvfDkdGTLttgepsve 20 
                 +++fD dGTLt     v+
  KHJ34586.1 612 LFMFDYDGTLTP---IVH 626
                 789********4...433 PP

  == domain 3  score: 5.6 bits;  conditional E-value: 0.0039
                 TSHHHHHHHHHHHTSTGGGEEEEESSHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
   Hydrolase 174 pspegkvaaireLqgkpeevamVGDgvnDaaalaa 208
                  + e+++++i e+  kp  v  VGD ++D  ++++
  KHJ34586.1 779 NKGEIVKRLISEFDPKPDFVFCVGDDFTDEDMFRE 813
                 4889*************************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (862 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.39
# Mc/sec: 6637.63
//
Query:       KHJ34587.1  [L=355]
Description: putative mitogen-activated protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.3e-68  229.0   0.0    8.3e-68  228.6   0.0    1.1  1  Pkinase        Protein kinase domain
    1.2e-31  110.0   0.0    1.5e-31  109.6   0.0    1.1  1  Pkinase_Tyr    Protein tyrosine kinase
    0.00069   19.0   0.3     0.0011   18.3   0.3    1.3  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family
     0.0026   16.8   0.5     0.0049   15.9   0.5    1.4  1  Haspin_kinase  Haspin like kinase domain
     0.0087   15.4   0.0      0.015   14.6   0.0    1.3  1  Kinase-like    Kinase-like
  ------ inclusion threshold ------
      0.023   14.6   0.2      0.047   13.6   0.2    1.4  1  APH            Phosphotransferase enzyme family
      0.068   12.2   0.0        0.1   11.6   0.0    1.2  1  Seadorna_VP7   Seadornavirus VP7


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  228.6   0.0   3.2e-71   8.3e-68       2     264 .]      24     311 ..      23     311 .. 0.86

  Alignments for each domain:
  == domain 1  score: 228.6 bits;  conditional E-value: 3.2e-71
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE.....SSEEEEEEE--TTEBHHHHHHHHSS- CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfee.....kdelylvleyveggeladllerkgsl 95 
                   +  +GeG++G+V +a++k +g++vA+Kki   + +     ++lrE+k+l+ ++h+ni+ ++++ +       +e+yl++e++e++ ++++++  + l
  KHJ34587.1  24 DIQDVVGEGAYGVVCSALHKPSGQKVAIKKITPFDHSM-FCLRTLREMKLLRYFNHENIISILDIQKPrsfqtFTEVYLIQELMETD-MHRVIR-TQDL 119
                 66789**************************9886665.6679********************98665555559***********77.899996.688* PP

                 -HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS....BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHH CS
     Pkinase  96 seeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk....ltsfvgtseYlAPEvl.keneyskkvDvWslGvilye 189
                 s+++++ +++q+l++l+ +Hs++++HrDlKp+N+L++ + +lK++DFGla+ + s+++    +t++v+t++Y+APE++ + +ey+k++DvWs+G+il+e
  KHJ34587.1 120 SDDHCQYFIYQTLRALKAMHSANVLHRDLKPSNLLLNANCDLKVCDFGLARSAASQEDnsgfMTEYVATRWYRAPEIMlTFKEYTKAIDVWSVGCILAE 218
                 ******************************************************99999******************9889****************** PP

                 HHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT......SHH...HHHTTS........................-HHHHHHHHHHT-SSGCCSTTHHHH CS
     Pkinase 190 lltgkppfsgekgkekvekeldqlekilkilg......etkeklpeasei........................seeakdllkkllkkdpkkRltaeel 258
                 +l+gkp+f+g++ ++       ql+ il++lg       +  k+                              s+ a+dll+kll+ +p kR+t++e+
  KHJ34587.1 219 MLSGKPLFPGKDYHH-------QLTLILDVLGtptmedYYGIKS-----RrareyirslpfkkkipfkqmfpktSDLALDLLEKLLAFNPVKRITVDEA 305
                 *********554444.......4444556666432223222222.....1333446777788888********************************** PP

                 HTSGGG CS
     Pkinase 259 lqhpyl 264
                 lqhpyl
  KHJ34587.1 306 LQHPYL 311
                 ****97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.6   0.0     6e-35   1.5e-31       3     209 ..      25     229 ..      23     249 .. 0.90

  Alignments for each domain:
  == domain 1  score: 109.6 bits;  conditional E-value: 6e-35
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEE.....SSSSEEEEEE--TTEBHHHHHHHT CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvct.....keepllivteyvkgGdLlkfLrkk 95 
                  +++ +GeGa+G V+++  k     + +kVa+K+++   ++    + l+e+k+++ ++h+ni+++l +          +++++ e+++  d++  +r++
   KHJ34587.1  25 IQDVVGEGAYGVVCSALHK----PSGQKVAIKKITPFDHSMFCLRTLREMKLLRYFNHENIISILDIQKprsfqTFTEVYLIQELMET-DMHRVIRTQ 117
                  57889***********999....8889********9999999*************************99654433345********86.9******98 PP

                  CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS.-HHHHHH.SEEEHHHHHHHH CS
  Pkinase_Tyr  96 ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWm.apEslke.kkftsksDvWsf 191
                      l+ ++   f++q  ++++ ++s +++Hrdl   N Ll+ n   k++DfGLar+  ++++ +   ++ +  +W+ apE++ + k++t++ DvWs 
   KHJ34587.1 118 ---DLSDDHCQYFIYQTLRALKAMHSANVLHRDLKPSNLLLNANCDLKVCDFGLARSAASQEDNSGFMTEYVATRWYrAPEIMLTfKEYTKAIDVWSV 212
                  ...9******************************************************9999999999999*****98***8755167********** PP

                  HHHHHHHHTTSSGTTTTS CS
  Pkinase_Tyr 192 GvllwEiftlgespypgl 209
                  G +l E+++ g+  +pg 
   KHJ34587.1 213 GCILAEMLS-GKPLFPGK 229
                  ********9.87766665 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.3   0.3   4.4e-07    0.0011      56     164 ..      64     164 ..      50     178 .. 0.73

  Alignments for each domain:
  == domain 1  score: 18.3 bits;  conditional E-value: 4.4e-07
         Kdo  56 travrEfrllkrLeeagvavpkpvaagavkvgleyrAlllterlegaqdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqe 154
                 +r  rE++ll+ ++++ +  +  +  + +  + +    l+ e +e   d+  ++++ ++l++   +  + ++ r+ + +h+a+v H+dl + n+ll+++
  KHJ34587.1  64 LRTLREMKLLRYFNHENIISILDIQ-KPRSFQTFTEVYLIQELME--TDMHRVIRT-QDLSDDHCQYFIYQTLRALKAMHSANVLHRDLKPSNLLLNAN 158
                 6777777777777777776554443.2334444466666666666..488888886.6799999999999999***********************998 PP

         Kdo 155 eeeeaeiwli 164
                       + + 
  KHJ34587.1 159 C----DLKVC 164
                 6....44444 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.5   1.9e-06    0.0049     139     261 ..      57     176 ..      18     183 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.9e-06
  Haspin_kinase 139 vtiskelslkelkslklvkgtypglllllqdkvlkekpdfyseqqlflvlllkdkGtdLeev...klkswkqalsifwqivkiLyvaEtkfeFEHR 231
                    + +s + +l  l+++kl++    + ++ + d  + ++  f++     ++l+ + + td+ +v   +  s ++++   +q++  L++  ++ +  HR
     KHJ34587.1  57 FDHS-MFCLRTLREMKLLRYFNHENIISILDIQKPRS--FQT--FTEVYLIQELMETDMHRVirtQDLSDDHCQYFIYQTLRALKAMHSA-NVLHR 146
                    3444.66777777777666553333333333333332..333..344566666667888877733444557899999*****99988766.677** PP

  Haspin_kinase 232 dLhldniLvdknlnvtlidlklsRlesseg 261
                    dL+  n L+++n    ++d+ l+R  +s++
     KHJ34587.1 147 DLKPSNLLLNANCDLKVCDFGLARSAASQE 176
                    ************************984443 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   5.8e-06     0.015     131     240 ..     110     216 ..      80     224 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 5.8e-06
  Kinase-like 131 lqkrsethkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlseve......kgfaPpEllgsrggytrk 222
                  ++ +  t+    ++++  +  q +r    +++  ++h ++++ nlll+ +  l++ +f+  + a  +   s         + +  pE++         
   KHJ34587.1 110 MHRVIRTQDLSDDHCQYFI-YQTLRALKAMHSANVLHRDLKPSNLLLNANCDLKVCDFGLARSAASQEDNSGFMteyvatRWYRAPEIMLT------- 199
                  3333333555567888888.99************************************855444444332222233444555666666555....... PP

  Kinase-like 223 nktkmthkldaWqlGlvi 240
                     ++t ++d+W +G   
   KHJ34587.1 200 -FKEYTKAIDVWSVGCIL 216
                  .34588899999999765 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.2   1.8e-05     0.047     152     198 ..     128     171 ..      87     198 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.8e-05
                 HHHHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-EE CS
         APH 152 vlaalaallpgelptvllHgDlhpgNllvdpddgrvtGviDfedagl 198
                 ++++l+al +   ++ +lH+Dl+p Nll++++ +    v Df++a+ 
  KHJ34587.1 128 IYQTLRALKAM-HSANVLHRDLKPSNLLLNANCDLK--VCDFGLARS 171
                 66777777776.788999************555554..999999975 PP

>> Seadorna_VP7  Seadornavirus VP7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   4.1e-05       0.1     143     186 ..     124     165 ..      85     175 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4.1e-05
  Seadorna_VP7 143 tvniivaglkdLmdfhsestnllhGDcnpenlmcDknGylklvD 186
                      +i   l++L+ +h  s n+lh D +p+nl+ + n  lk+ D
    KHJ34587.1 124 CQYFIYQTLRALKAMH--SANVLHRDLKPSNLLLNANCDLKVCD 165
                   55689999********..899********************999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.48u 0.18s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 3007.73
//
Query:       KHJ34588.1  [L=946]
Description: putative sec23 sec24 trunk domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-70  238.1   0.0    1.6e-70  237.4   0.0    1.3  1  Sec23_trunk     Sec23/Sec24 trunk domain
    1.8e-21   75.9   0.0    6.5e-21   74.1   0.0    2.0  2  Sec23_helical   Sec23/Sec24 helical domain
    8.8e-18   64.8   0.1      2e-17   63.7   0.1    1.7  1  Sec23_BS        Sec23/Sec24 beta-sandwich domain
    1.8e-16   59.9   4.5    3.5e-16   58.9   4.5    1.5  1  zf-Sec23_Sec24  Sec23/Sec24 zinc finger
    4.8e-07   29.6   0.0      1e-06   28.5   0.0    1.6  1  Gelsolin        Gelsolin repeat
  ------ inclusion threshold ------
       0.05   13.0   0.2       0.11   11.9   0.2    1.5  1  Vps36-NZF-N     Vacuolar protein sorting 36 NZF-N zinc-finger


Domain annotation for each model (and alignments):
>> Sec23_trunk  Sec23/Sec24 trunk domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.4   0.0   5.5e-74   1.6e-70       1     242 [.     340     581 ..     340     582 .. 0.97

  Alignments for each domain:
  == domain 1  score: 237.4 bits;  conditional E-value: 5.5e-74
                  SS--EEEEEEE-SHHHHHHTHHHHHHHHHHHHCTTSS.TSTT-EEEEEEESSSEEEEETSTTS...SSSEEEEECHTTSCCSSTSSSSSEETTTTHHH CS
  Sec23_trunk   1 pkppvflFviDvsleaikegelkalkeslkqsLdllP.eepralvglitfdsvvhffelksel...rqpkelvvsdlqdvflpladrlLvplseseav 94 
                  p+p+v+lF++Dvs+ a+++g+l++ ++++++sL+++P  + r++vg++++ds +h+f +  ++   +++++lvvsdl+++flp +++lLvplse++  
   KHJ34588.1 340 PQPLVYLFLLDVSYAAVSSGLLATSARTILDSLNRIPnADRRTRVGFLAVDSSLHYFAIPKDSeenSETQMLVVSDLDEPFLPVPQELLVPLSECRLC 437
                  79***********************************77********************9988788999***************************** PP

                  HHHHHHHHHHHSTT-TTC-----HHHHHHHHHHHHCHCTS-EEEEEEESS---SSTTTSS-SBTTSCCTSSTTCHHCHSCSSSCHHHHHHHHHHHCTE CS
  Sec23_trunk  95 ledlLeelpemfavtagkrperalgpalkaavellkavetggkiivfvgslptvgaggklksredeslldidkekaklvkkadkfYkkLakecvkqgi 192
                  +e++L++l++mf+ +  +++++++g+al+a+++l++    ggk++++  slp+vg  gkl+ red++ll+++ke ++l+++ ++fYk++a ec+k+++
   KHJ34588.1 438 VEKFLTSLQTMFQFN--QSNSSCMGSALRAGHKLIS--PLGGKLVIITASLPNVGY-GKLEMREDKKLLGTSKE-SSLLQTGNSFYKSFAVECSKNQV 529
                  ***************..*******************..99****************.*****************.889999999************** PP

                  EEEEEEECSS--SHHHHTHHHHTTT-EEEEETTTC..CHHHHHHHHHHHHHH CS
  Sec23_trunk 193 svDlFlfsldyvdlaelkqlaeltgGqvvlydsFs..aekdasklkqdlkrv 242
                  s+D+Flfs++y d+a+l++l+++tgGq+++y+ ++  + +da k+ ++l  +
   KHJ34588.1 530 SIDMFLFSSQYQDVASLSNLPRYTGGQTYFYPGWNagRIEDAVKFASELSDY 581
                  ***********************************98899*******99765 PP

>> Sec23_helical  Sec23/Sec24 helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       1.8   5.3e+03      50      66 ..     537     553 ..     514     554 .. 0.67
   2 !   74.1   0.0   2.2e-24   6.5e-21       1     102 [.     681     783 ..     681     784 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 1.8
                    -------GGGTTHHHHH CS
  Sec23_helical  50 psqlqlpeslklLPlyi 66 
                    +sq+q  +sl+ LP+y+
     KHJ34588.1 537 SSQYQDVASLSNLPRYT 553
                    45677788999999996 PP

  == domain 2  score: 74.1 bits;  conditional E-value: 2.2e-24
                    -HHHHHHHHHHHHHHHTTTS-HHHHHHHHHHHHHHHHHHHHHH----.---------GGGTTHHHHHHHHHTSTTTS--TT--HHHHHHHHHHHHH CS
  Sec23_helical   1 Dqeavtvllakqaidkalesgladarealdtslvdllsayrkvgasg.sspsqlqlpeslklLPlyilallKspafrggnsvpaDervfalsllls 95 
                    Dq a+t++++++a+++al+ gl+ areal+ +lv+ll++++k+ a+g  + + lq+p++l+ LP + l+l+K+  +r+++++p+D r++al++l++
     KHJ34588.1 681 DQCAITSFYSQKAVERALSGGLEPAREALQAKLVELLQTFKKELAGGnLGGGGLQFPANLRGLPALFLGLIKNVGLRKSSQIPSDLRSAALCQLST 776
                    899******************************************98655567******************************************* PP

                    --HHHHH CS
  Sec23_helical  96 lpvdqll 102
                    lp++ l+
     KHJ34588.1 777 LPLRLLI 783
                    **98775 PP

>> Sec23_BS  Sec23/Sec24 beta-sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.7   0.1   6.9e-21     2e-17       1      96 []     587     670 ..     587     670 .. 0.95

  Alignments for each domain:
  == domain 1  score: 63.7 bits;  conditional E-value: 6.9e-21
                 EEEEEEEEEE-TTEEEEEEESSSEECSTBESSEESECSESEEEEEEEETT--EEEEEEESSBTCTTSEEEEEEEEEEEETTSEEEEEEEEEEEEEE CS
    Sec23_BS   1 gfnatlevrtSkelkvsgliGncvslsnvsekeiGeggtsewklcsldpdstlavyfdideklksgkqayiQfatlYthssgerrlRVttvalpva 96 
                 g++a+l+vr +++l++s ++Gn++++s         +++  ++++++ +d++++v++ +de + +++++++Q+a+l+t+s+ err+RV+t+alp++
  KHJ34588.1 587 GLEAVLRVRATTGLRMSTFYGNFFNRS---------SDL--CAFPAFPRDQSYVVEVAMDE-SMTKSFVCMQTAVLHTTSNSERRIRVITLALPTT 670
                 679************************.........9**..******************95.5568**************************9975 PP

>> zf-Sec23_Sec24  Sec23/Sec24 zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.9   4.5   1.2e-19   3.5e-16       1      38 [.     266     303 ..     266     304 .. 0.96

  Alignments for each domain:
  == domain 1  score: 58.9 bits;  conditional E-value: 1.2e-19
  zf-Sec23_Sec24   1 PirCrrCraylNpfckidfggkrwiCnfCnhknevppe 38 
                     + rCrrCr+y+Npf+++ ++g+rw+Cn+Cn  n+vp++
      KHJ34588.1 266 ISRCRRCRSYINPFVSFLDHGHRWRCNMCNLTNDVPQA 303
                     67**********************************97 PP

>> Gelsolin  Gelsolin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0   3.4e-10     1e-06       3      72 ..     811     880 ..     809     884 .. 0.89

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 3.4e-10
                 EEEEEBSSSGGGEETTSEEEEEESSEEEEEEHTT..SHHHHHHHHHHHHHHHHHCTTTTTSEEEEEETTHHH CS
    Gelsolin   3 vlpkvvklsssslesgdcyLLdngftiflWiGke..ssqeeknfaadlaaeldseerfplpeliredqgkep 72 
                 +lp+  +lss+ + s + yL+d g+t flW+G++  ++++ ++f ++  ++l   + + lpel + d +++ 
  KHJ34588.1 811 TLPPLLNLSSERIVSYGLYLIDDGQTQFLWVGRDavPQLLLDVFDVTDKTQLKVGK-GSLPELSN-DFSERV 880
                 789999**********************************************9555.99999988.766665 PP

>> Vps36-NZF-N  Vacuolar protein sorting 36 NZF-N zinc-finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.2   3.8e-05      0.11       8      28 ..     287     307 ..     283     315 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.8e-05
  Vps36-NZF-N   8 atWvCpICsfsNevpsnfdpn 28 
                   +W C  C  +N vp+ fd+ 
   KHJ34588.1 287 HRWRCNMCNLTNDVPQAFDWD 307
                  68*****************93 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (946 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.24s 00:00:00.87 Elapsed: 00:00:00.40
# Mc/sec: 7127.04
//
Query:       KHJ34589.1  [L=282]
Description: putative mediated genome instability protein rmi1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-50  170.5   1.0    1.9e-49  168.4   1.0    1.8  1  RMI1_N    RecQ mediated genome instability protein


Domain annotation for each model (and alignments):
>> RMI1_N  RecQ mediated genome instability protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.4   1.0   1.1e-53   1.9e-49       8     217 .]      21     270 ..      14     270 .. 0.78

  Alignments for each domain:
  == domain 1  score: 168.4 bits;  conditional E-value: 1.1e-53
      RMI1_N   8 pvspeWleacvesleeepnlplsallktvleqlLasDltes.........................tnsssvlpaniaeqrksesspa.......lkgp 74 
                  +++++l++++++ ++ ++ p s +++tv+++lL+sD++                           +++ss lp++i +        +       l+ +
  KHJ34589.1  21 ILHSSFLNSILTRSSSIRQQPISVIVATVKHRLLCSDINIQnnnnnnndisnnnnnninmnnnnilSSTSSYLPTTIIN--------NkqietsfLNYD 111
                 57889999999887766779*******************9966655555555555555544444443334446666544........04445556**** PP

      RMI1_N  75 vvvQvldiedigsSaysqlealeavergeetrgrevirt..........esaaaasakadeenseekeeaqats.........seskkrrmlkLeLtDg 154
                 ++vQvldiedig+S+++qle lea++rge+++gre+irt          e++ +++ + ++++  +k      s         se++ ++++kL+L+D 
  KHJ34589.1 112 IFVQVLDIEDIGQSKWDQLEFLEAEKRGEKMKGREIIRTvvpvssfdeeENEYSQDHNISDSTMVVK------ShkflsqnnsSEKQGKGPFKLILQDW 204
                 ***************************************9998766542122222222222222222......134556678899999*********** PP

      RMI1_N 155 .gqkvkAiElkpikglsl..klaiGvKllLkggvkvrrGvlLLepenvkvlGGeveeldkawkeer 217
                  g+k +AiElk++++++    ++iG+Kl L++g+kv+rG+lL+ep++v+vlGG+++ ld awk er
  KHJ34589.1 205 kGTKTWAIELKRVDKIGAppVMNIGCKLWLRKGCKVARGILLMEPTTVSVLGGKIDILDTAWKTER 270
                 *******************9*******************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       978  (0.0545485); expected 358.6 (0.02)
Passed bias filter:                      268  (0.0149478); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.21s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2280.21
//
Query:       KHJ34590.1  [L=314]
Description: putative ngg1 interacting factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-60  204.1   0.0    3.3e-60  203.8   0.0    1.1  1  NIF3      NIF3 (NGG1p interacting factor 3)


Domain annotation for each model (and alignments):
>> NIF3  NIF3 (NGG1p interacting factor 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.8   0.0   1.8e-64   3.3e-60       2     234 ..      10     267 ..       9     278 .. 0.87

  Alignments for each domain:
  == domain 1  score: 203.8 bits;  conditional E-value: 1.8e-64
        NIF3   2 ivevleelaplelae.swDnvGlqvgdpek...evkkvllaldlteevleeAiekgadliithHPlifkplkrlteddykkrllkkliknnislysaHt 96 
                 +v+++++l+p +la+ s+Dn+Gl+++ p +   + ++vll++dlt +v+ eAi ++ + ii++HP+if+plk+lt+++ +++ l +l+++++s+y++Ht
  KHJ34590.1  10 VVAAVQNLYPQKLADsSFDNTGLLLEAPCRqnySKNSVLLTIDLTTAVASEAITRKDSIIIAYHPIIFRPLKSLTSRNSQQATLLRLAQEGVSVYCPHT 108
                 78999*********99**********555555799**************************************************************** PP

        NIF3  97 nlDaapgGvndwlakalglekieplepskeek..........keeeeglgrigeleepvsleelakklkkklglek...vrva........gdldkkvk 174
                 ++Da+pgG+ndwla+ +  +++e+  + ++++             ++g+gri+++++pvsl+++++++++ l++++   v  a        ++ + +++
  KHJ34590.1 109 AVDAVPGGLNDWLADIVTGKETESQISLSNRSlikpipdcpiGFDGAGYGRIVRFHTPVSLKTVLERISNGLNATNglsV--AvpqgitgaSKSKISIS 205
                 *****************555555444333334799999999988899*************************88776551..34455554368888899 PP

        NIF3 175 kvaicaGsGaslieeakakgaDlliTGelkhhealdakekgiavidvgHyatErvflea.....l 234
                 ++ icaGsG+sl+   +  ++Dll TGel+hheal+a e g  vi++gH++tEr+fl++     l
  KHJ34590.1 206 SIGICAGSGGSLL---NGLDVDLLFTGELSHHEALAAIEGGKVVITAGHSNTERIFLRSrmrplL 267
                 *************...999**************************************98533333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2298.76
//
Query:       KHJ34591.1  [L=319]
Description: putative vps51 vps67 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.4e-23   80.1   0.2    2.4e-22   78.8   0.2    1.8  1  Vps51     Vps51/Vps67
    0.00012   20.9   0.8    0.00018   20.4   0.8    1.3  1  Dor1      Dor1-like family
  ------ inclusion threshold ------
      0.013   15.7   0.1      0.028   14.6   0.1    1.7  1  COG5      Golgi transport complex subunit 5
      0.024   14.5   0.0      0.038   13.8   0.0    1.3  1  Sec5      Exocyst complex component Sec5
       0.15   12.1   1.4       0.31   11.1   1.3    1.5  1  COG2      COG (conserved oligomeric Golgi) complex component,
       0.18   12.2   1.7       0.44   11.0   1.7    1.7  1  Latarcin  Latarcin precursor


Domain annotation for each model (and alignments):
>> Vps51  Vps51/Vps67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   0.2   8.2e-26   2.4e-22       1      67 [.     119     185 ..     119     221 .. 0.92

  Alignments for each domain:
  == domain 1  score: 78.8 bits;  conditional E-value: 8.2e-26
       Vps51   1 ldspdfdaeayvrellakstlkellkveasllseiraldselkalVydnYskLisasdtIrkmksem 67 
                 ld+pdfd ea+v+ +l+++tl ell++++sll eiraldse+kalVydnYskLi+a++tI++m++ +
  KHJ34591.1 119 LDQPDFDIEAFVKRVLEEQTLVELLATYNSLLLEIRALDSEQKALVYDNYSKLITATETIARMRECV 185
                 699*************************************************************866 PP

>> Dor1  Dor1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.8   5.9e-08   0.00018       4     126 ..     134     263 ..      87     278 .. 0.82

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 5.9e-08
        Dor1   4 lsskpleelekepelLaeeaeeilaqiqdLarknyktlidaaealeairqelediraqledLvlkl.pkLteectrfskkaeeisek....rkenklll 97 
                 l+ ++l el    ++L  e+++++ + ++L  +ny  li+a+e + ++r+ +e+ ++ + + +l+l +++ ++++  +k+ +++s      +k    ++
  KHJ34591.1 134 LEEQTLVELLATYNSLLLEIRALDSEQKALVYDNYSKLITATETIARMRECVESGEEPTMTGALSLvNNIFSKAEVLKKNIDKVSGAlydkQKTEGEMK 232
                 667888888888899999************************************999988877776655555555555555555555333344333333 PP

        Dor1  98 dkheq..llellelPqlmdrcirngyydeal 126
                 + +++     +l++P+   r +++g+++ea 
  KHJ34591.1 233 KIKARnvARRVLDTPEKVRRLVKEGNHEEAR 263
                 33333003479******************96 PP

>> COG5  Golgi transport complex subunit 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.1   9.3e-06     0.028       5      74 ..     121     185 ..     117     223 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 9.3e-06
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        COG5   5 epdFdpksfanallkatnnnddteldlstplkrlnydiqeldkrlrqlitsnhleLlehlskskslssvl 74 
                 +pdFd ++f +++l      ++t   l ++ + l   i+ ld++ + l+ +n+++L++ +++++  ++ +
  KHJ34591.1 121 QPDFDIEAFVKRVLE-----EQTLVELLATYNSLLLEIRALDSEQKALVYDNYSKLITATETIARMRECV 185
                 69*************.....8899999999*********************************9998843 PP

>> Sec5  Exocyst complex component Sec5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.3e-05     0.038       2     113 ..     158     270 ..     157     288 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.3e-05
        Sec5   2 eelkslvksnftkfvkvkdtldqiykefseskteaqed..slveeLeeslneairkttllfkpvlenkekadklraaleviernkflFnLPksLkesia 98 
                 +e+k lv +n +k + + +t+ ++++ ++++++   +   slv+++ ++ + ++++ +++   + ++++++ ++++ ++  +  + +++ P+++++ ++
  KHJ34591.1 158 SEQKALVYDNYSKLITATETIARMRECVESGEEPTMTGalSLVNNIFSKAEVLKKNIDKVSGALYDKQKTEGEMKK-IKARNVARRVLDTPEKVRRLVK 255
                 689*************************886665433346999999999999***********9999998888877.567799999************* PP

        Sec5  99 kgdydklindYkkak 113
                 +g+++++ + ++++k
  KHJ34591.1 256 EGNHEEARKIWEEVK 270
                 ***998876666665 PP

>> COG2  COG (conserved oligomeric Golgi) complex component, COG2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.3    0.0001      0.31       3     121 ..     114     245 ..     112     257 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.0001
        COG2   3 FdeheFgvpdFdpdqFvselrhgvpLesl...rrdLeaylkllekellelvnedyadFvslSghLvglqeeleevesp....laaarkkvesvreklse 94 
                 ++++e+  pdFd ++Fv+ + + ++L +l    + L      l++e   lv ++y   +   +    ++e +e  e p     +++++++ s  e l++
  KHJ34591.1 114 YEPSELDQPDFDIEAFVKRVLEEQTLVELlatYNSLLLEIRALDSEQKALVYDNYSKLITATETIARMRECVESGEEPtmtgALSLVNNIFSKAEVLKK 212
                 7889999***********95554444444111567777788999***************************9998877222246789999999999*** PP

        COG2  95 reeeveskleeakeleekr......ellklllk 121
                 ++ +v++ l ++++ e +       ++ +++l+
  KHJ34591.1 213 NIDKVSGALYDKQKTEGEMkkikarNVARRVLD 245
                 ********9888877765523544444444444 PP

>> Latarcin  Latarcin precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.7   0.00015      0.44      32      68 ..     235     271 ..     206     279 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00015
    Latarcin  32 nlRkvqgRLeemvenlrkvedledtEEARgafkklkd 68 
                 + R+v+ R  +  e++r++    + EEAR +++++k 
  KHJ34591.1 235 KARNVARRVLDTPEKVRRLVKEGNHEEARKIWEEVKV 271
                 67****************************9988874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       913  (0.0509231); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 2444.66
//
Query:       KHJ34592.1  [L=67]
Description: hypothetical protein EV44_g1986 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.13   11.7   0.3       0.23   10.9   0.3    1.4  1  DUF3645   Protein of unknown function (DUF3645)


Domain annotation for each model (and alignments):
>> DUF3645  Protein of unknown function (DUF3645)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.3   1.3e-05      0.23      15      27 ..       2      14 ..       1      15 [. 0.90

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 1.3e-05
     DUF3645 15 DvPserSEFsHpD 27
                D Ps  SEF++ D
  KHJ34592.1  2 DDPSNSSEFGDAD 14
                88********998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       284  (0.0158403); expected 358.6 (0.02)
Passed bias filter:                      171  (0.00953762); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.21s 00:00:00.55 Elapsed: 00:00:00.36
# Mc/sec: 555.30
//
Query:       KHJ34593.1  [L=326]
Description: putative inositol phospholipid biosynthesis protein scs3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-74  248.7   3.7    8.3e-74  248.2   3.7    1.2  1  Scs3p     Inositol phospholipid synthesis and fat-storage-ind


Domain annotation for each model (and alignments):
>> Scs3p  Inositol phospholipid synthesis and fat-storage-inducing TM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  248.2   3.7   4.6e-78   8.3e-74       2     246 .]      86     308 ..      85     308 .. 0.81

  Alignments for each domain:
  == domain 1  score: 248.2 bits;  conditional E-value: 4.6e-78
       Scs3p   2 lnyfankdnilNvlFVKrgWfWttlvvllllltepryeastsakstarkrrlkkallrylilTlwWilftqwffgppimdrifvltGgkCellfevfde 100
                 ++yfa+k+ni+N++FVKrgW+W+t+ +l++l+++p     t ++ t + +r++  llry i+TlwWi++tqwffgpp++dr f+ltGgkCel+      
  KHJ34593.1  86 PSYFAKKNNIFNTFFVKRGWAWITISYLYFLFSHP----FTGSAGTLSPKRIQ-GLLRYGIVTLWWIFITQWFFGPPLIDRNFTLTGGKCELA-----L 174
                 68******************************999....44444555566665.556**********************************33.....4 PP

       Scs3p 101 eseeeeelsekvtsaaCkaaggkWkgGhDiSGHvFLlvlssllLleelapvvakralaklkkekkkkarkvkeekrakllangavaeve..eee..kkl 195
                 +s++ +++++ +t++aCka gg+WkgGhDiSGHvFLlvl+s++L+ee+ +vv +r+++                +r  ++++ga+++++  +e+   ++
  KHJ34593.1 175 SSHSYRDQRKFLTASACKAEGGHWKGGHDISGHVFLLVLGSMFLFEEVLHVVLRRRQE----------------ERIITMKDGAIKSASivSENrfPTE 257
                 455567899****************************************988885322................2223333333322221122211222 PP

       Scs3p 196 lekalllenilllalvglwlwmllmTaiyFHtllEklsGLlvallvvllvY 246
                    +++l++++++++++++l+mllmTa yFHt++Ekl+GL+val+++++ Y
  KHJ34593.1 258 SLGIWTLGSKIAIGVATMCLYMLLMTAAYFHTWFEKLTGLMVALAGIFIAY 308
                 235666777**************************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       752  (0.0419432); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.16s 00:00:00.63 Elapsed: 00:00:00.33
# Mc/sec: 2918.84
//
Query:       KHJ34594.1  [L=260]
Description: putative glutathione s-transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-08   34.9   0.0    2.5e-08   34.2   0.0    1.4  1  GST_N     Glutathione S-transferase, N-terminal domain
      1e-07   32.1   0.0      2e-07   31.2   0.0    1.5  1  GST_N_2   Glutathione S-transferase, N-terminal domain
    2.3e-07   30.9   0.0    4.1e-07   30.1   0.0    1.4  1  GST_C_3   Glutathione S-transferase, C-terminal domain
    9.5e-07   29.1   0.0    1.6e-06   28.4   0.0    1.4  1  GST_N_3   Glutathione S-transferase, N-terminal domain
    6.4e-06   26.3   0.0      1e-05   25.7   0.0    1.3  1  GST_C     Glutathione S-transferase, C-terminal domain
    8.2e-06   25.8   0.0    1.4e-05   25.1   0.0    1.4  1  GST_C_2   Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> GST_N  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0   8.3e-12   2.5e-08       6      75 ..      12      87 ..       7      88 .. 0.90

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 8.3e-12
                ESSSTSHTHHHHHHHHHHTT-EEEEEEECSTTTCGGC.HHHHHHCTTS-SSEEEET......TEEEESHHHHHHHHH CS
       GST_N  6 ysirgsprahrirlllaakgveyevvpldfeageeks.pellklnplgkvPaLedn......gkkltESraIleYia 75
                y +++++r+ ri++ll+++ ++ye    ++++    + pel+k++ lgk+P+  +        ++++ES++I eY+ 
  KHJ34594.1 12 Y-WLEQSRSQRILWLLEELQIPYELEVFHRDKVTMLAgPELKKIHALGKSPVISIThpgstePLVIAESGFITEYLL 87
                3.67779******************9999988888889***************9988999999************96 PP

>> GST_N_2  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.0   6.8e-11     2e-07       5      67 ..      19      86 ..      17      89 .. 0.91

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 6.8e-11
                HHHHHHHHHHCT--EEEEEEH...-TTSHHHHHHHHCTTTSSSEEE-..CTTE...EEESHHHHHHHH CS
     GST_N_2  5 ahRvlialalkglediisvvvlepkgfekseefprlnprgtVPvLwd..kdgq...vineSseIlryl 67
                ++R+l++l++++++++++v++     + +++e+++++++g+ Pv+ +  ++++   vi+eS  I +yl
  KHJ34594.1 19 SQRILWLLEELQIPYELEVFHRDKVTMLAGPELKKIHALGKSPVISIthPGSTeplVIAESGFITEYL 86
                79******************9999999*******************9544666899***********9 PP

>> GST_C_3  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.0   1.4e-10   4.1e-07      19      93 ..     162     243 ..     144     248 .. 0.81

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 1.4e-10
                 HHHHHHHHHHHHCHHHHHHHHHH.C.HGTSSSSTTS--HHHH.HHHHHHHHHHHH....TCCCC-HHHHHHHHHHHTSHHHH CS
     GST_C_3  19 ekkkefleerlpkflkyfekvlk.k.kgggylvgdklTyADl.alfqvldgleea....ealkkfpklkalyervearpkik 93 
                 + +  +l+   +++++++e  l+    gg+yl+g +lT AD+ + f ++++l        +++++pkl ++++++e++p+ k
  KHJ34594.1 162 KIRSGYLDANFKTHFSFLESQLStApGGGKYLCGPNLTGADIlMSFPLISALAAHsstgLTQERYPKLYSYIKALEEEPGYK 243
                 556678899999***********7546666***********955578888888777765444****************9765 PP

>> GST_N_3  Glutathione S-transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.0   5.5e-10   1.6e-06       4      72 ..      14      91 ..      11      99 .. 0.83

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 5.5e-10
                -TTSHHHHHHHHHHHHHT--EEEE---TTT....THHHHHHH-TT--SSEE..ETTS-....EEESHHHHHHHHHHHH- CS
     GST_N_3  4 fpaSpyarrvrlaLnekglpvevvevtpge....hdeellaknplgkvPvL..eddge....altdSlaIidyLeelyp 72
                 + S+ ++r+ ++L+e+++p+e++  + ++      +el++++ lgk Pv+  +++g     ++ +S  I +yL + ++
  KHJ34594.1 14 LEQSR-SQRILWLLEELQIPYELEVFHRDKvtmlAGPELKKIHALGKSPVIsiTHPGSteplVIAESGFITEYLLDHFS 91
                55666.9***************98877555333359***************87666777999************99987 PP

>> GST_C  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   3.4e-09     1e-05      33      93 .]     174     240 ..     160     240 .. 0.86

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 3.4e-09
                 HHHHHHHHHHH....TSSSSSTTSSCHHHHHHHHHHHHHHHHTTTTT..TTTSHHHHHHHHHHHTSH CS
       GST_C  33 evlsaleeelk....kqdylvGdkltlADialvpilnwlqrlglafg..qekfpnlkawlerimarp 93 
                   +s+le +l+    + +yl+G +lt ADi++ + l  +     + g  qe +p+l+ +++ + ++p
  KHJ34594.1 174 THFSFLESQLStapgGGKYLCGPNLTGADILMSFPLISALAAHSSTGltQERYPKLYSYIKALEEEP 240
                 5699**************************9888887666666666667************998877 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   4.6e-09   1.4e-05       9      69 .]     170     235 ..     143     235 .. 0.94

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 4.6e-09
                 HHCCHCHHHCTTT---SS.....CTTCS--HHHHHHHHHHHHHHHHHHS----.TT-HHHHHHHHH CS
     GST_C_2   9 eqldaaldaleahLadsp....flfGdqptlaDialapflvrlraagpgfdir.eaypnlraWler 69 
                 ++++ ++++le++L   p    +l+G ++t aDi     l+ + aa+  + +  e+yp+l  ++++
  KHJ34594.1 170 ANFKTHFSFLESQLSTAPgggkYLCGPNLTGADILMSFPLISALAAHSSTGLTqERYPKLYSYIKA 235
                 57999*****************************************999977779********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.41u 0.18s 00:00:00.59 Elapsed: 00:00:00.34
# Mc/sec: 2265.36
//
Query:       KHJ34595.1  [L=220]
Description: hypothetical protein EV44_g0593 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.015   14.6  11.9       0.02   14.2  11.9    1.1  1  NOA36           NOA36 protein
       0.02   15.0   1.6      0.023   14.8   1.6    1.1  1  YL1             YL1 nuclear protein
      0.061   11.6   4.7      0.078   11.3   4.7    1.1  1  eIF-3c_N        Eukaryotic translation initiation factor 3 su
      0.062   12.9   1.0      0.069   12.7   1.0    1.3  1  GCIP            Grap2 and cyclin-D-interacting
       0.08   11.2   5.1        0.1   10.8   5.1    1.1  1  Nop14           Nop14-like family
       0.11   12.4   5.7       0.14   12.0   5.7    1.1  1  Sigma70_ner     Sigma-70, non-essential region
       0.14   11.6   5.9       0.17   11.3   5.9    1.1  1  SDA1            SDA1
       0.16   12.4  19.6       0.24   11.8  19.6    1.3  1  CENP-B_dimeris  Centromere protein B dimerisation domain
       0.28   11.2   6.5       0.39   10.7   6.5    1.2  1  RXT2_N          RXT2-like, N-terminal
       0.65    8.5   6.2       0.78    8.2   6.2    1.1  1  RRN3            RNA polymerase I specific transcription initi
        1.1    7.5   9.9        1.4    7.1   9.9    1.0  1  CDC45           CDC45-like protein
          2    7.5  22.6        2.6    7.1  22.6    1.2  1  DUF2457         Protein of unknown function (DUF2457)
        2.9    7.2   8.2        3.7    6.8   8.2    1.1  1  BUD22           BUD22
        3.1    6.9   8.0        4.2    6.4   8.0    1.2  1  Astro_capsid_p  Turkey astrovirus capsid protein
        4.1    7.8  18.8        8.1    6.9  18.8    1.5  1  PBP1_TM         Transmembrane domain of transglycosylase PBP1
        4.7    6.9  17.0        6.4    6.4  17.0    1.2  1  Cwf_Cwc_15      Cwf15/Cwc15 cell cycle control protein
          5    7.1  10.1        1.9    8.5   7.3    1.8  2  DUF2076         Uncharacterized protein conserved in bacteria
        7.8    6.8   7.5         12    6.2   7.5    1.2  1  PTPRCAP         Protein tyrosine phosphatase receptor type C-
        8.9    5.7  20.5         13    5.1  20.5    1.3  1  Osteopontin     Osteopontin


Domain annotation for each model (and alignments):
>> NOA36  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2  11.9   2.1e-05      0.02     270     297 ..      73     100 ..      41     110 .. 0.58

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.1e-05
       NOA36 270 ddegdedddddddeedddeeeddedeee 297
                 d++ d+ddddddd++ddd+++dd+d + 
  KHJ34595.1  73 DNNDDNDDDDDDDDDDDDDDDDDDDVDV 100
                 2333333333333333333333333332 PP

>> YL1  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   1.6   2.4e-05     0.023      44      83 ..      76     113 ..      67     182 .. 0.60

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.4e-05
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx RF
         YL1  44 eeeensDsdfdsdeedeesdeeedeeegekele.rqerkkr 83 
                 +++  +D d d+d++d++ d+++d+ + +k++  ++  +++
  KHJ34595.1  76 DDN--DDDDDDDDDDDDD-DDDDDDVDVDKKMPyKPDVQEK 113
                 221..2222223332333.3333333333333212222222 PP

>> eIF-3c_N  Eukaryotic translation initiation factor 3 subunit 8 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   4.7   8.3e-05     0.078     131     202 ..      68     137 ..      66     155 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 8.3e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXX............................................. CS
    eIF-3c_N 131 yredPeeeeeeeeedededdegedeededeksvkateavkkaseskvekeeeedeeteeeklskkekkekvk 202
                 y  +P+++++++++d+d+dd+++d++d+d+ +v +    k+  + +++k +  +e+++++++ + ++  +++
  KHJ34595.1  68 YMPNPDNNDDNDDDDDDDDDDDDDDDDDDDVDVDKKMPYKP--DVQEKKPQMPSEHSDRQHFMPDDQLLQTV 137
                 67799999999999999999999998888888877766666..34445555555666666666665555544 PP

>> GCIP  Grap2 and cyclin-D-interacting
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   1.0   7.3e-05     0.069     145     163 ..      80     107 ..      21     158 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 7.3e-05
                 ....S-------------...........- CS
        GCIP 145 edeeedededdldddede...........e 163
                 +d++ d d+dd+ddd  +           +
  KHJ34595.1  80 DDDDDDDDDDDDDDD--DddvdvdkkmpyK 107
                 111112222222222..1235555555550 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   5.1   0.00011       0.1     372     420 ..      75     123 ..      67     158 .. 0.44

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00011
       Nop14 372 eeeedeeeeedeeeeeeeeededdlsdleseeeeeedeleeelleeekk 420
                 ++++d+++++d+++++++++d+d + d+++  + + +e + +++ e+++
  KHJ34595.1  75 NDDNDDDDDDDDDDDDDDDDDDDVDVDKKMPYKPDVQEKKPQMPSEHSD 123
                 2222222222222222222222222222222223333322222333333 PP

>> Sigma70_ner  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   5.7   0.00015      0.14      37      76 ..      75     113 ..      52     135 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00015
  Sigma70_ner  37 eeeeeeedeeeeeeeedddeeeseseaadeeelkeealek 76 
                   ++ +++d++++++++ddd+++++ + +++ + k+++ ek
   KHJ34595.1  75 NDD-NDDDDDDDDDDDDDDDDDDDVDVDKKMPYKPDVQEK 113
                  222.222333333334444567888889999999999887 PP

>> SDA1  SDA1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   5.9   0.00018      0.17      99     128 ..      76     103 ..      57     147 .. 0.47

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00018
        SDA1  99 ddeedwevesdddseedseggwidvesdee 128
                 dd++d++ ++ddd+++d++++ +dv+  ++
  KHJ34595.1  76 DDNDDDDDDDDDDDDDDDDDDDVDVD--KK 103
                 11111111111111112222222222..22 PP

>> CENP-B_dimeris  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8  19.6   0.00026      0.24      18      43 ..      75     100 ..      69     138 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00026
  CENP-B_dimeris  18 eeeeeeeedeededeeddedddevpv 43 
                     ++++++++d++d+d++dd+ddd+v v
      KHJ34595.1  75 NDDNDDDDDDDDDDDDDDDDDDDVDV 100
                     23333444444455555556666655 PP

>> RXT2_N  RXT2-like, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   6.5   0.00041      0.39      58      88 ..      74     102 ..      43     121 .. 0.55

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00041
      RXT2_N  58 ekeekeeeeedeegdeededdddeeeaeaae 88 
                 ++++++++++d+++d++d dddd ++ + ++
  KHJ34595.1  74 NNDDNDDDDDDDDDDDDD-DDDD-DDVDVDK 102
                 222222222222222222.2222.2222333 PP

>> RRN3  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.2   6.2   0.00083      0.78     222     264 ..      76     109 ..      58     157 .. 0.55

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00083
        RRN3 222 deedeeleeeleededdedddeddeesdlddlssdeeaeedee 264
                 d++d         d+dd+ddd+dd+++d+dd++ d+++  + +
  KHJ34595.1  76 DDND---------DDDDDDDDDDDDDDDDDDVDVDKKMPYKPD 109
                 1111.........122222222223333333333333333332 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   9.9    0.0015       1.4     130     172 ..      70     114 ..      62     142 .. 0.38

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0015
       CDC45 130 eesdeedeeeeeeddddeeeeeeeeedee..deeedeeeskkkrk 172
                 ++ d++d++++++dddd+++++++++d+   d++   + + +++k
  KHJ34595.1  70 PNPDNNDDNDDDDDDDDDDDDDDDDDDDVdvDKKMPYKPDVQEKK 114
                 444433322222222222222222222220022222222222222 PP

>> DUF2457  Protein of unknown function (DUF2457)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  22.6    0.0028       2.6      58      86 ..      75     103 ..      64     133 .. 0.48

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0028
     DUF2457  58 eddeedeeddddddddedddedddeeded 86 
                 +dd++d++dddddddd+ddd+dd + d++
  KHJ34595.1  75 NDDNDDDDDDDDDDDDDDDDDDDVDVDKK 103
                 22222222222222222222222222222 PP

>> BUD22  BUD22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   8.2    0.0039       3.7     226     288 ..      76     129 ..      50     136 .. 0.52

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0039
       BUD22 226 ddededeyneetdeesseesdssdssesasesesessekkkkkkkkkkkkakakkvtsstfLP 288
                 dd d+d   +++d+++++++d++d+ + +++ +       k++ ++kk + +++ ++ ++f+P
  KHJ34595.1  76 DDNDDD---DDDDDDDDDDDDDDDDVDVDKKMP------YKPDVQEKKPQMPSEHSDRQHFMP 129
                 222222...122222233333333333322222......223444444445555555666665 PP

>> Astro_capsid_p  Turkey astrovirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   8.0    0.0045       4.2     226     274 ..      61     107 ..      13     114 .. 0.47

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0045
                     X......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.. CS
  Astro_capsid_p 226 rktgaeeeisdpsdeedeevsdeetdtevesdeDeddevdrfDletsye 274
                       tg+ + + +p+++ d  ++d++ d ++++d+D+dd+  + D +  y+
      KHJ34595.1  61 SPTGQVPYMPNPDNNDD--NDDDDDDDDDDDDDDDDDDDVDVDKKMPYK 107
                     33444444444444444..333333333333333333333456666665 PP

>> PBP1_TM  Transmembrane domain of transglycosylase PBP1 at N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9  18.8    0.0086       8.1      32      59 ..      77     109 ..      64     127 .. 0.55

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0086
     PBP1_TM  32 dddyddeyddeedDdddddeeeevprk.....g 59 
                 d+d dd+ dd+ dDddddd++ +v +k      
  KHJ34595.1  77 DNDDDDDDDDDDDDDDDDDDDVDVDKKmpykpD 109
                 222222334444555555666666666332231 PP

>> Cwf_Cwc_15  Cwf15/Cwc15 cell cycle control protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4  17.0    0.0067       6.4     124     146 ..      75      97 ..      64     126 .. 0.65

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0067
                 ----------------------- CS
  Cwf_Cwc_15 124 eeeeesdddsdsdsdddddedet 146
                 ++++++ddd+d+d+ddddd+d++
  KHJ34595.1  75 NDDNDDDDDDDDDDDDDDDDDDD 97 
                 22233333333333333334433 PP

>> DUF2076  Uncharacterized protein conserved in bacteria (DUF2076)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   7.3     0.002       1.9     233     257 ..      72      96 ..      17      99 .. 0.71
   2 ?   -1.9   0.0       2.8   2.7e+03     112     143 ..     165     194 ..     155     213 .. 0.39

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.002
     DUF2076 233 sdnnadaasdddsdddssddgggDD 257
                  dnn d+++ddd+ddd++dd+++DD
  KHJ34595.1  72 PDNNDDNDDDDDDDDDDDDDDDDDD 96 
                 3444444444444444443333333 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.8
     DUF2076 112 aapagqalgqeeqyaaqpgyaqqqaqpqygqp 143
                 ++ +++ + +  +++a+  y++ +++p++ q 
  KHJ34595.1 165 VYTSKPDYVYVPKPSASS-YNP-KPDPNKPQF 194
                 333333333222222211.222.222222222 PP

>> PTPRCAP  Protein tyrosine phosphatase receptor type C-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   7.5     0.013        12      39      89 ..      76     127 ..      68     141 .. 0.69

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.013
     PTPRCAP  39 edgeedeeeEdqedeedeeedsedleggee.eaesqeeeqaeseeageeqal 89 
                 +d+++d++++d++d++d ++d++d+++++  + + qe++ ++ +e++++q  
  KHJ34595.1  76 DDNDDDDDDDDDDDDDDDDDDDVDVDKKMPyKPDVQEKKPQMPSEHSDRQHF 127
                 5666666666666677777777888877651556677777777787777765 PP

>> Osteopontin  Osteopontin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  20.5     0.014        13      63     106 ..      73     125 ..      66     161 .. 0.43

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.014
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXX..XXXXXXXXXX CS
  Osteopontin  63 dhvDdvDddddddhvdsqdsvdsddsde.......tddsdk..sdeshhsDes 106
                  d+ Dd Ddddddd+ d+ d  d dd d        +d ++k     s+hsD  
   KHJ34595.1  73 DNNDDNDDDDDDDDDDDDDDDDDDDVDVdkkmpykPDVQEKkpQMPSEHSDRQ 125
                  33344443333333333333333333222223353332222002335555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       709  (0.0395449); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        97  (0.00541023); expected 17.9 (0.001)
Passed Fwd filter:                        29  (0.00161749); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 1553.93
//
Query:       KHJ34596.1  [L=209]
Description: hypothetical protein EV44_g3274 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       365  (0.0203581); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.21s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1626.28
//
Query:       KHJ34597.1  [L=679]
Description: putative transcription initiation factor iif subunit alpha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-05   24.1  48.0    1.3e-05   24.1  48.0    3.2  2  TFIIF_alpha  Transcription initiation factor IIF, alpha subun


Domain annotation for each model (and alignments):
>> TFIIF_alpha  Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1  48.0   7.1e-10   1.3e-05      95     418 ..     234     568 ..     215     580 .. 0.66
   2 ?   -4.8  10.7      0.39     7e+03     289     406 ..     521     634 ..     519     638 .. 0.53

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 7.1e-10
                  TTSXEEEEESSTTS..EEEEEEEXSSSSSSEEEEEEEEETTSEEEEEEEEEEEEEEEGGCSTXXSSTTTHHHHHHHXSSSXSHHHHHHXXXXXX.... CS
  TFIIF_alpha  95 ddqPWiLevggkeggqkkfrGireGgvsenasyyvltkapdgafeAypvneWynFnpvaryktLtleeAEeeferRkktlngfslmlkkalkkgeaav 192
                  ++ PW Le   ++ +++ + G  e + s + +  ++++  dg f+ +p+++Wy+F    ++k+ t++eAE +++++ k     s++++k ++k+ea  
   KHJ34597.1 234 EALPWHLE---DADNKNTWIGNYEAALS-DMNVALIMQ--DGVFKMIPIEKWYRFSSKGQFKAYTIDEAEAKMGKKVKE----SRWVMKEIEKKEADR 321
                  678*****...5555688********99.666667777..**********************************87775....788888888887655 PP

                  .XXXXXXX............XXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXX.X CS
  TFIIF_alpha 193 gdedeeeek...........kkgggGrsk.......dLkikdkegddeedsdesdkgdededeekkkkKkkkkaknkkkldddkkkkrgsdddadeyd 272
                  ++ +  +             + ++ G++        d+  +d  +dd+e ++ + + de+ +e+k++ Kk++ + n  + +d+ +  r+  ++++e +
   KHJ34597.1 322 ANLEGRKAMvklftvktessTFKNSGKREiedmdelDFNGEDLFQDDDELATVEPDKDEETKEAKNRIKKEQLGANVFDQADEAEVDRELLEEEKEAE 419
                  54332222122344333224445678877777776666667887888888888888888888999988989999998888888888888777777777 PP

                  XXX..XXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXX..XXXXXXXXX CS
  TFIIF_alpha 273 sdd..Gdd.....egrEldyisDdsasendpeeredkkseEeeekkeieqdedeeekeeekkeee..gklskkkkkakklkkkkkekdkkdSddeeds 361
                    +  G +     + rE  yi D++++    e  ed  s+Ee+ k+ +++ e+e+++ + k++++     s k+  ++  ++k +++ kk  + +   
   KHJ34597.1 420 ARKkfGKNvkkalKKRERNYIYDSDSDHPYSEISEDDTSDEEKVKEIDKRLEEENKN-KLKTDSKaiPSISMKGAINQASRSKDNDILKKTLSRKRLG 516
                  655445542222256888888888888888888888889999999887775544443.3333444014555555556666667777656665566666 PP

                  XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  TFIIF_alpha 362 ddsDideedsvslvkakKkkekkkeekvdsnessagnsrparpspeqkdskskrkaa 418
                    s +++  + s  k++Kk++   + ++ +++s+     p++ sp++++s++++   
   KHJ34597.1 517 SPSHSESSGNESSRKKHKKRHFTPNIEIMNSTSG-----PQSISPNSQHSSGTQNSH 568
                  6666666666555555555555555555455554.....444444444444444332 PP

  == domain 2  score: -4.8 bits;  conditional E-value: 0.39
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  TFIIF_alpha 289 dsasendpeeredkkseEeeekkeieqdedeeekeeekkeeegklsk.kkkkakklkkkkkekdkkdSddeedsddsDideedsvslvkakKkkekkk 385
                  +++s+n+   +++ k+    +  ei ++ +  ++ + ++++ ++ ++ ++   k+  +++k   ++ S +++ s  sD +   +  +  + Kk++ k+
   KHJ34597.1 521 SESSGNESSRKKH-KKRHFTPNIEIMNSTSGPQSISPNSQHSSGTQNsHNLTVKNANSNGKSL-DNYSTSGNLSPISDNEATRG-DISDQAKKRH-KS 614
                  4555554444444.3333333344444444444434333333333330444444445555555.55666999999999998777.4455555555.66 PP

                  XXXX.XXXXXXXXXXXXXXXX CS
  TFIIF_alpha 386 eekvdsnessagnsrparpsp 406
                  +  v   +ss+++sr+++p p
   KHJ34597.1 615 NVSV-IKNSSRAGSRQGSPIP 634
                  6666.4667888999999866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (679 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1985  (0.110714); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.70u 0.29s 00:00:00.99 Elapsed: 00:00:00.44
# Mc/sec: 4671.20
//
Query:       KHJ34598.1  [L=714]
Description: putative plasma membrane channel protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     6e-102  341.8  16.6   7.7e-102  341.4  16.6    1.1  1  Anoctamin  Calcium-activated chloride channel
  ------ inclusion threshold ------
       0.35   10.1   9.9       0.39   10.0   0.4    3.0  3  UbiA       UbiA prenyltransferase family
        3.1    7.1   9.3       0.64    9.4   5.1    1.9  2  DUF373     Domain of unknown function (DUF373)


Domain annotation for each model (and alignments):
>> Anoctamin  Calcium-activated chloride channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  341.4  16.6  1.3e-105  7.7e-102       1     440 [.     160     620 ..     160     628 .. 0.91

  Alignments for each domain:
  == domain 1  score: 341.4 bits;  conditional E-value: 1.3e-105
   Anoctamin   1 IrdyFGekiAlYFawlgfytsallppavlGlllflyglatitlfdneltvvfalfmviWatlflelWkrreaelaykWgtsdfeeeeeprpefrgelkr 99 
                 Ird+FGek A+YFa+++ y+ +l++pa +G++ +l+          ++++++a+f+ +W+++f+e Wk+++++l+++Wg++d +e e +    +ge++ 
  KHJ34598.1 160 IRDQFGEKTAFYFAFVQSYFLFLILPASFGFCAWLF--------LGPYSPIYAIFNGLWCIIFVENWKKKQKQLKVQWGMKDNHELEYQTRLLQGEITS 250
                 9**********************************7........246*********************************9999999889999999998 PP

   Anoctamin 100 espvtgeeefyyppwkrrlfrllvslplvllliclavvgvlilrclalqelvssvke.....llsflptvlnlvlililnevykklaiwltdlEnhrtq 193
                  +++ g + + + + k +l ++++++p    +++++++g li++c+ +++++s++++     +l flpt+++ vl+++++ + +kla  ltd+E  +  
  KHJ34598.1 251 HNSISGLNLKTILFLK-QLLKQFLQIPYA--VAAIITLGGLITICFGIEVFISEIYNgpfkkILVFLPTIILTVLLPAISAFLTKLASELTDFEDDKSR 346
                 8899999999999999.8888999***99..7778999999999*************96555555********************************** PP

   Anoctamin 194 seyekslilKvflfqfvnsylslfyiaFvkgkflkypgkylr.................rseecdeegcleelkeqLaiilvtkqllnnilevllPylk 275
                 +++e+s+i K+f+++f+ sy+++f++aFv+++f + + +yl+                   +  + + + ++l  q+++++vt q+ n+ le+++P++k
  KHJ34598.1 347 NSHETSMIRKIFVLNFIISYFPIFLTAFVYVPFGQIIFPYLNnfhqiiktrstldhqivPLKMIEFKVNKDRLISQVIYFTVTAQISNFGLEIIVPFVK 445
                 *****************************************9****************9999999*******************************995 PP

   Anoctamin 276 eklkk.....kkk.......esekdekeeeeskkltqaekeyelkkyedlfddYlemviqfGyvtlFsaafPlapllallnniieirldafklvtelrR 362
                 +k+ +     + k       ++ + +++++esk+l q+++e+e+kky+ ++ d+ em+iqfGy++lFs+++Pl+++ +l+nn+ieir da+k+vte++R
  KHJ34598.1 446 RKVLSkikefQ-KrnarpdnRNLTINDHKSESKFLIQVRNEAEMKKYD-VTSDFREMIIQFGYLSLFSVVWPLTAVSFLFNNWIEIRGDAIKMVTEYQR 542
                 55544333331.034556667788888889*****************7.89************************************************ PP

   Anoctamin 363 pvperaesiGiWqkilealgvlavitnallialtsdpek.dteqylsvlaarlafvvvlehvvlllkyliavlipdipk 440
                  +p ra+siG+W+++l++l++l+ it ++ + l+s + + ++e+y++++  ++a+++  eh++l+++++++ l+ +  +
  KHJ34598.1 543 SIPWRADSIGPWLDALDFLAWLGSITSTAFVYLFSANGPdSSETYMNIKGFLVAIII-YEHLFLAIRLVVRKLLDNLDS 620
                 *******************************99995333667888889888888888.************999887654 PP

>> UbiA  UbiA prenyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.4   6.6e-05      0.39     183     242 ..     164     226 ..     160     232 .. 0.76
   2 ?    4.7   0.7    0.0026        16     141     213 ..     299     383 ..     269     389 .. 0.58
   3 ?   -0.5   0.1       0.1   6.1e+02     148     172 ..     509     533 ..     494     578 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 6.6e-05
        UbiA 183 lGrkaaril....lalllavllla...llllllalllllylllalllaalallraarlvrrrdakka 242
                 +G+k+a+++    +    ++l+l+    + +++ l+l++y  +++++ +l++++ + ++++++++ +
  KHJ34598.1 164 FGEKTAFYFafvqS----YFLFLIlpaSFGFCAWLFLGPYSPIYAIFNGLWCIIFVENWKKKQKQLK 226
                 79999999865542....3333334555899999999999999999999999999999999888765 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0026
        UbiA 141 l.........sllalllalavflltwaialan.....dlrdregDrkagiktlpvvlGrkaarillalllavlllallllllallll 213
                 +          +l++l+++++ +l  ai  +       l d e+D+ ++ + ++ +    +  +  ++ ++ ++l  +++++++   
  KHJ34598.1 299 IseiyngpfkKILVFLPTIILTVLLPAISAFLtklasELTDFEDDKSRNSHETSMIRKIFVLNF--IISYFPIFLTAFVYVPFGQII 383
                 13344554464555555555555555555555556789*******8888888888876766666..555555555533444444433 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.1
        UbiA 148 lalavflltwaialandlrdregDr 172
                 l+  v++lt+  +l+n++  ++gD+
  KHJ34598.1 509 LFSVVWPLTAVSFLFNNWIEIRGDA 533
                 3344444444444444444444443 PP

>> DUF373  Domain of unknown function (DUF373)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.1      0.46   2.8e+03     248     271 ..      54      78 ..      36     107 .. 0.50
   2 ?    9.4   5.1   0.00011      0.64     176     294 ..     274     394 ..     253     433 .. 0.63

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.46
      DUF373 248 asvssglltlilafiyga.vewlal 271
                 ++v +g  t+il+f+ ++ +++++ 
  KHJ34598.1  54 TEVRYGSSTYILIFVKDSlIDFIVT 78 
                 3344444445555554431233333 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00011
      DUF373 176 lpelalaiillllGlylllrGfgldelleelle.klkesleegritfvtyvvalll.lligiisgyislesvss.asvssglltlila..fiygavewl 269
                  + +a+a+i++l Gl+ +   fg++  ++e+ +  +k++l     +++t+++ +++ +l  ++s ++ +e+ +s +s +++++ +i++  fi + ++++
  KHJ34598.1 274 QIPYAVAAIITLGGLITIC--FGIEVFISEIYNgPFKKILVFLPTIILTVLLPAISaFLTKLASELTDFEDDKSrNSHETSMIRKIFVlnFIISYFPIF 370
                 3345666666666655554..555556666666567777776666666666544443666677777777766666666666666655555888888888 PP

      DUF373 270 alailtaslgkiideylkreekdia 294
                 + a++++ +g+ii  yl ++ ++i 
  KHJ34598.1 371 LTAFVYVPFGQIIFPYL-NNFHQII 394
                 88888888888888888.4444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (714 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       729  (0.0406604); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 5012.54
//
Query:       KHJ34599.1  [L=271]
Description: putative complex i intermediate-associated protein 30 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-46  157.7   0.0    3.2e-46  157.3   0.0    1.2  1  CIA30     Complex I intermediate-associated protein 30 (CIA30


Domain annotation for each model (and alignments):
>> CIA30  Complex I intermediate-associated protein 30 (CIA30)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.3   0.0   1.8e-50   3.2e-46       2     160 .]      44     226 ..      43     226 .. 0.98

  Alignments for each domain:
  == domain 1  score: 157.3 bits;  conditional E-value: 1.8e-50
       CIA30   2 dFkspesldkwtllsDrvmGGvStaslklskk............dktalFsGnlstel......inrgGFasvrt......kkrkrkldlssyegleLr 76 
                 +F++p+ +++++++sD+++GG+St+sl++ ++             ++a+F+Gn+s++l      i+r+GFa +rt      +++k+ +d++ y+ l+Lr
  KHJ34599.1  44 SFENPTFINDCKIMSDQDIGGFSTSSLEWIPPckssnptladnlHGHARFHGNISIQLplnrpeIQRTGFAAWRTkdrgytIFGKSLWDIDPYTFLALR 142
                 6999*************************988*********99889***************************************************** PP

       CIA30  77 vkGDgrkYklnlkteskeqsglsyqadfetk.kgewetvkipfsdfvptfrGrvvedqeeldlskiksiglllsdkqegpfeLei 160
                 +k+DgrkY++nl+tes   +++++q+++++k +gewetv ip+s+fv+t++G vve q+e+ ++++++ig+ l+d+ +g+f L+i
  KHJ34599.1 143 IKSDGRKYFVNLQTESI-VQTDIHQHRLYAKrPGEWETVLIPWSEFVRTNHGVVVEPQREMLRQSLRTIGIGLTDRVPGKFMLCI 226
                 ***************99.***********9999**************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       256  (0.0142785); expected 358.6 (0.02)
Passed bias filter:                      231  (0.0128842); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 2131.07
//
Query:       KHJ34600.1  [L=327]
Description: putative pre-mrna-splicing factor cwc26 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-44  150.4   6.5    4.3e-44  150.4   6.5    2.7  2  Bud13     Pre-mRNA-splicing factor of RES complex
  ------ inclusion threshold ------
        0.1   11.7   8.2       0.13   11.4   8.2    1.3  1  Rgp1      Rgp1


Domain annotation for each model (and alignments):
>> Bud13  Pre-mRNA-splicing factor of RES complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -8.1  14.7         2   1.8e+04       6      80 ..      97     173 ..      16     175 .. 0.74
   2 !  150.4   6.5   4.8e-48   4.3e-44       1     145 []     174     311 ..     174     311 .. 0.93

  Alignments for each domain:
  == domain 1  score: -8.1 bits;  conditional E-value: 2
       Bud13   6 dktgrkidlee.kreaeaekkkkeeeekeekkkewgkGlvq.keekekrleelekekkkplaryaddedlneelkek 80 
                 d+  ++i l + ++ a+++ ++++    eek +++++G+    +++++ +++ e+ k+++ a  + +e+  ++ k++
  KHJ34600.1  97 DEAEKIIALTTaEKLATQNDNDQKPILVEEKITKMENGTHAgLQSAKEVAKQFEQRKQEEAASWKAEERSKKSSKKE 173
                 55666776666455455555555555555555556555544134444444555555555566555555555555554 PP

  == domain 2  score: 150.4 bits;  conditional E-value: 4.8e-48
       Bud13   1 etvyRdktgrkidleekreaeaekkkkeeeekeekkkewgkGlvqkeekekrleelekekkkplaryaddedlneelkekerwdDPmaaflkkkkkkkk 99 
                 et+yRd+tgr+idl  +r +ea+++++ +++ke++k+e  kG+vq+ ek k +eel+++k +pl+r+ +de++n+el+ek+rw+DP+a+f+++      
  KHJ34600.1 174 ETIYRDATGRRIDLVIRR-QEAQREAALKAAKEREKLEELKGDVQRAEKIKLREELDDAKFMPLSRSINDEEMNKELREKDRWNDPAAKFMSQGM---- 267
                 7**************988.888888999999*************************************************************544.... PP

       Bud13 100 kkskkkkpkykgpaappNRfgIkPGyrWDGvdRsnGfEkklfealn 145
                 k +k++kp y g aa+pNR++I+PGyrWDGvdR+nG+E+k+f+aln
  KHJ34600.1 268 K-AKNSKPLYVG-AAAPNRYKIRPGYRWDGVDRGNGWEAKRFNALN 311
                 2.22349***99.*****************************9976 PP

>> Rgp1  Rgp1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   8.2   1.4e-05      0.13     162     291 ..      44     194 ..       5     246 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.4e-05
        Rgp1 162 lpsvnssgeqlghdLmspyillrdearvkevk............srkkssssskekkkskskkkseksesskedFlkyveelleneseskdi....... 241
                 l+  +++++   hd+++p i+ +++ ++++vk            +++ + +   e                k   l+  e+l ++++++ +        
  KHJ34600.1  44 LGWSKEHSSLRSHDVDKPLIVNQKSLEIQKVKkntwkkvgavltNSNPDDQDADE--------------AEKIIALTTAEKLATQNDND-QKpilveek 127
                 556678889999********************55555555554422222222222..............22222222333333333222.221333333 PP

        Rgp1 242 ..........eellspqlevqfeeeedseenee...srrksvvsk....esssvkeaidllilrsql 291
                                +++++qfe+++++e  +    +r+k++ +k      + +   idl+i+r++ 
  KHJ34600.1 128 itkmengthaGLQSAKEVAKQFEQRKQEEAASWkaeERSKKSSKKeetiYRDATGRRIDLVIRRQEA 194
                 3333333332444445555666555554444435543333333332344223344456666655544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2253  (0.125662); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 2510.42
//
Query:       KHJ34601.1  [L=275]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2147.14
//
Query:       KHJ34602.1  [L=422]
Description: putative di-copper centre-containing [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-25   90.1   6.3    3.6e-24   86.3   3.2    2.9  2  Tyrosinase   Common central domain of tyrosinase
    1.9e-13   51.1   0.0    3.1e-13   50.4   0.0    1.3  1  Tyosinase_C  Tyosinase C-terminal domain


Domain annotation for each model (and alignments):
>> Tyrosinase  Common central domain of tyrosinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.3   3.2     4e-28   3.6e-24      28     221 ..       5     198 ..       4     199 .. 0.74
   2 ?    1.5   0.1     0.034     3e+02      53      99 ..     225     267 ..     207     314 .. 0.61

  Alignments for each domain:
  == domain 1  score: 86.3 bits;  conditional E-value: 4e-28
                 STTHHHHHHHHHHHHHHHH.HHH............HHH...THCSEEEB--TSS-....-SS--HHHH-SEEE-TTCCGE-EEEEE-TTT--BESSSSS CS
  Tyrosinase  28 nalFltWHRaYlllfEqal.rei............cgy...apdvtlPYWDwaadksspldespeslggdgatipeenlsggcvisnplakytlkkklg 110
                 ++lFl+WHR+Yl  +E++l + +            + y   a+d+++PYWDwa++      + p+   + +++i++ n++  + i+npl +y+++  l+
  KHJ34602.1   5 SVLFLPWHRPYLSVVENSLiA-EaqgiakgyknysTTYqeaANDLRIPYWDWAES-----PKLPDIATKPKVEIDTWNGV--EFIENPLFQYKFHGGLD 95 
                 789****************63.336778888877733355699************.....899999999**********9..99**********99555 PP

                 -.............G-SBTTCTCB-CTS-CGGGGGS-BTCSSHHHHHH-GGGHHHHH--SHHHHHHHHHH--------HHHHHHHHHHHHHESSSTTST CS
  Tyrosinase 111 p.............kakgtlkseenklaanprclkrenaelsaelatassleellkksesytsfsntlegkkskeesalespHnavHvwvGangdmgdv 196
                 p             +  +t++  ++k++++ + l+r n+ l++++  a ++ +++ ks+s+++fs+tl+   s     le +Hn+vH  vG     +  
  KHJ34602.1  96 PnlfppdapdgwfsNFSTTVRGVNTKNRDEFSHLDRVNDSLQRSNIMA-NTWRVFVKSKSFNAFSTTLTPGLS-----LEGIHNNVHGSVG----GS-- 182
                 544444444544554455555555555555555555555444444444.444566668888888888888644.....788**********....34.. PP

                 TCGGGSTHHHHHHHHHHHHHHHHHH CS
  Tyrosinase 197 ataafDPiFflHHaniDrlwaiWqa 221
                          +lHHaniDrl+a+Wqa
  KHJ34602.1 183 ---------WLHHANIDRLFALWQA 198
                 .........***************7 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.034
                 THCSEEEB--TSS-..........-SS--HHHH-SEEE-TTCCGE-EEEEE-T CS
  Tyrosinase  53 apdvtlPYWDwaad......ksspldespeslggdgatipeenlsggcvisnp 99 
                 ++++ +P+W+ +a       +       ++sl+  + t pe  ++   +++++
  KHJ34602.1 225 ENTGLVPFWNQKAGewwtsaS-------SRSLSAFSYTYPELRGN---QTPEQ 267
                 468889999999885554441.......33333333333333333...22222 PP

>> Tyosinase_C  Tyosinase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.4   0.0   3.5e-17   3.1e-13       1     104 [.     307     406 ..     307     410 .. 0.90

  Alignments for each domain:
  == domain 1  score: 50.4 bits;  conditional E-value: 3.5e-17
  Tyosinase_C   1 dwvanvrvekyalgg.sftihfflGdppedpttwatapnlvGsvavfasaeeegcencqaaskvlvtgqvpLtsaLleragelesldpeeVepyLkkn 97 
                  +w   +rv+k++lgg  f+i +f+G +p+++++ +++++++ sv +f  + + +++n     +++++++v L++ L ++ g+ +  d  +V++yL+++
   KHJ34602.1 307 EWSLAIRVSKFDLGGsRFKILIFMGGVPSNSEDLEKSSTFIDSVIIFPPPYNLTMKN---LPQIITYSEVNLNDGLRRN-GR-NVEDVSSVINYLRTQ 399
                  8***********************99*********************5555555555...6999************886.77.777999********* PP

  Tyosinase_C  98 Lkwrvvk 104
                  L+wrv+ 
   KHJ34602.1 400 LEWRVQR 406
                  *****85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       426  (0.0237604); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3141.07
//
Query:       KHJ34603.1  [L=274]
Description: hypothetical protein EV44_g3198 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.035   14.2   1.2      0.035   14.2   1.2    2.6  3  DUF4870   Domain of unknown function (DUF4870)
       0.56   10.4   5.5        0.4   10.9   0.3    2.7  2  DUF4305   Domain of unknown function (DUF4305)


Domain annotation for each model (and alignments):
>> DUF4870  Domain of unknown function (DUF4870)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1     0.014   1.3e+02      12      34 ..      97     119 ..      80     127 .. 0.74
   2 ?   14.2   1.2   3.9e-06     0.035      38     102 ..     138     202 ..     133     206 .. 0.89
   3 ?   -2.0   0.1      0.43   3.8e+03      79      91 ..     243     255 ..     220     267 .. 0.44

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.014
     DUF4870  12 alsklliplgniilPlviwllkk 34 
                 a++++ + ++ ++ Pl+i+   +
  KHJ34603.1  97 AILVMTASFLLVVTPLIIYAKAQ 119
                 33456667788999999987554 PP

  == domain 2  score: 14.2 bits;  conditional E-value: 3.9e-06
     DUF4870  38 efvdeqgkealNFqislliysiilivlsllvligflllllllllllnlvlviiaaikanegeeyr 102
                 + +  +g   +NF is+l++++ l+  ++   i+f+  ++++++++ ++ +i a++  n+g + +
  KHJ34603.1 138 PCILFAGVATMNFLISVLLLAFSLLSSKFSKSISFMNAMFTIVAAIGFCSSIGACLYLNKGSPNK 202
                 667788999*****************99******9669999999999999*********998765 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.43
     DUF4870  79 lllllnlvlviia 91 
                 +l l+ + ++  a
  KHJ34603.1 243 ALELYTVLISATA 255
                 2222222222222 PP

>> DUF4305  Domain of unknown function (DUF4305)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.3   4.5e-05       0.4      20      37 .]     140     157 ..     138     157 .. 0.91
   2 ?    0.8   0.7     0.064   5.8e+02      17      34 ..     172     189 ..     171     191 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 4.5e-05
     DUF4305  20 ilLilfAAlDFgiairlf 37 
                 il++ +A+++F i++ l+
  KHJ34603.1 140 ILFAGVATMNFLISVLLL 157
                 9************99875 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.064
     DUF4305  17 fwTilLilfAAlDFgiai 34 
                 f +  ++++AA+ F ++i
  KHJ34603.1 172 FMNAMFTIVAAIGFCSSI 189
                 6667899*****999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (274 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 2130.84
//
Query:       KHJ34604.1  [L=701]
Description: putative heat shock transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.6e-28   97.4   0.6    1.8e-27   95.8   0.6    1.9  2  HSF_DNA-bind  HSF-type DNA-binding
  ------ inclusion threshold ------
      0.055   13.9   0.1       0.22   12.0   0.0    2.0  2  Ets           Ets-domain
       0.12   12.3   3.0       0.54   10.1   1.6    2.4  2  RIH_assoc     RyR and IP3R Homology associated
       0.19   12.2   1.4        1.5    9.3   0.4    2.4  2  DUF4140       N-terminal domain of unknown function (DUF4140)
       0.21   11.7   4.0         18    5.5   0.4    3.3  3  DUF148        Domain of unknown function DUF148
       0.45   10.4   1.9       0.88    9.4   0.0    2.5  3  KH_1          KH domain


Domain annotation for each model (and alignments):
>> HSF_DNA-bind  HSF-type DNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       4.4   1.3e+04      12      24 ..      35      47 ..      24      55 .. 0.79
   2 !   95.8   0.6   5.9e-31   1.8e-27       1      94 [.     154     255 ..     154     257 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 4.4
                  TTTSEESSSSSEE CS
  HSF_DNA-bind 12 eelisWsedgksf 24
                  +++i+W++d++ +
    KHJ34604.1 35 TDFIKWTPDSNEI 47
                  689***9998866 PP

  == domain 2  score: 95.8 bits;  conditional E-value: 5.9e-31
                   HHHHHHHHHCT...TTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE.....---SSBTTB--TTSEEEEESS--XXXXXX CS
  HSF_DNA-bind   1 FlkkLyklled...eelisWsedgksfvvkdkeefakevlpkyfkhsnfssFvrqLnlYgFrk.....vkrkeekkkkkskvweFshenFkrgkpel 89 
                   F++kL ++le+   ++li+Ws++g+sf+v d++efak+++p++fkh+n++sFvrqLn+YgF+k      ++ +++++k+++ +e+++++Fkrg+++l
    KHJ34604.1 154 FVQKLSSFLEEsrnTDLIRWSDRGDSFIVLDEDEFAKTLIPELFKHNNYASFVRQLNMYGFHKrvglsDNSMKASERKNKSPSEYYNPYFKRGHQNL 250
                   9********87666899**********************************************77754232333666666777************** PP

                   XXXXX CS
  HSF_DNA-bind  90 Lkkik 94 
                   L  i 
    KHJ34604.1 251 LWLIS 255
                   99886 PP

>> Ets  Ets-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       2.4   7.1e+03      15      25 ..      34      44 ..      22      47 .. 0.68
   2 ?   12.0   0.0   7.3e-05      0.22       6      42 ..     158     193 ..     154     219 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.4
         Ets 15 kssiiaWtdke 25
                 +++i+Wt ++
  KHJ34604.1 34 ATDFIKWTPDS 44
                6899***9764 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 7.3e-05
         Ets   6 llelLedpskssiiaWtdkeegeFklvdpeevarlWg 42 
                 l + Le+++++++i+W d+ + +F ++d++e+a+   
  KHJ34604.1 158 LSSFLEESRNTDLIRWSDR-GDSFIVLDEDEFAKTLI 193
                 567899999********99.*************9754 PP

>> RIH_assoc  RyR and IP3R Homology associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   1.6   0.00018      0.54      13      70 ..     332     388 ..     323     395 .. 0.91
   2 ?   -0.0   0.0      0.27   7.9e+02      20      46 ..     579     605 ..     576     632 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00018
   RIH_assoc  13 fLqllceghnselqnylreQkdnktsynlvseivdllenlskatelnskslelmlqvl 70 
                  +q l ++hn+ +q+    Q+ ++   n +++i+++l ++++  +l+ +s +++ q++
  KHJ34604.1 332 AIQRLRKDHNTLFQQSVTFQSLHDRHDNSINAILSFLATIYNR-SLDGQSPTNIAQIF 388
                 689999***********************************99.89999999998887 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.27
   RIH_assoc  20 ghnselqnylreQkdnktsynlvseiv 46 
                 + n+e+ n+lr Q ++++++  v++++
  KHJ34604.1 579 QTNHEIDNLLRLQIEQDSKIGSVKAVL 605
                 679999*********999887777665 PP

>> DUF4140  N-terminal domain of unknown function (DUF4140)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.4   0.00051       1.5      65      97 ..     302     342 ..     272     343 .. 0.74
   2 ?    1.0   0.0      0.19   5.7e+02      45      94 ..     553     604 ..     536     608 .. 0.78

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00051
     DUF4140  65 e........elkalraeleeledelaaledelaaaearlaf 97 
                 +        +++ l ++l e+++++aa++++++++++  + 
  KHJ34604.1 302 PetnslqrrDVNVLHNQLAEIQQQQAAISNAIQRLRKDHNT 342
                 0334444434999**********************998775 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.19
     DUF4140  45 gaatildvqvervpnreaeee..elkalraeleeledelaaledelaaaear 94 
                  aa i++ ++ ++p+++++++  e+++++ e+++l + + + ++++ +++a 
  KHJ34604.1 553 SAAGISGSRIIQTPQNTPVKNleEIRQTNHEIDNLLRLQIEQDSKIGSVKAV 604
                 3488999999999999999988669999999999888877777777777765 PP

>> DUF148  Domain of unknown function DUF148
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.4   4.3e+03      42      77 ..      62     103 ..      59     107 .. 0.76
   2 ?    5.5   0.4     0.006        18      70     102 ..     312     344 ..     287     351 .. 0.90
   3 ?    5.4   0.2    0.0062        19      46      84 ..     505     543 ..     496     552 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.4
      DUF148  42 akvkaqkeevkknvtavisnLs......svqekleaIldnks 77 
                 +  +a+++++++ v+  i +L+      +  ++ +aI++n +
  KHJ34604.1  62 KSDSAEQASLNEPVSPLITQLArrpinhQLMQSGQAIFNNPD 103
                 566788999999999999999987776666667777888776 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.006
      DUF148  70 eaIldnkslTrkeqkeaieelkkqypkevstlf 102
                  ++l+n+   +++q++ai +  + + k+ +tlf
  KHJ34604.1 312 VNVLHNQLAEIQQQQAAISNAIQRLRKDHNTLF 344
                 579999999*******************99998 PP

  == domain 3  score: 5.4 bits;  conditional E-value: 0.0062
      DUF148  46 aqkeevkknvtavisnLssvqekleaIldnkslTrkeqk 84 
                 +++++++ n ++ ++++++  +++++  d++s T+++q+
  KHJ34604.1 505 NNTNAANPNPSTHVMQIPDMLSQYDNLDDDSSHTIEQQN 543
                 6778889999999************************97 PP

>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0   0.00029      0.88      12      28 ..     120     136 ..     113     143 .. 0.84
   2 ?   -2.5   0.1       1.6   4.7e+03      21      52 ..     264     301 ..     261     308 .. 0.59
   3 ?   -3.1   0.1       2.4   7.3e+03      20      34 ..     572     585 ..     572     586 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00029
                 HHHHTGGGHHHHHHHHH CS
        KH_1  12 griIGkgGsnIkeIree 28 
                   +IG+ G nI+ ++e+
  KHJ34604.1 120 NHVIGREGDNIRFLEEK 136
                 47*************94 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.6
                 HHHHHHHHHT-EEEEESSTT.............T.-EEEEEE CS
        KH_1  21 nIkeIreetgakIkvpksedeg..........sderevtisG 52 
                 n k+I+e   +  + + s+de+          +++r++ + G
  KHJ34604.1 264 NKKKIKE-AECILV-E-SDDERdieevygdthQNSRTLSV-G 301
                 6677777.666544.4.33222356677777777777777.5 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 2.4
                 HHHHHHHHHHT-EEE CS
        KH_1  20 snIkeIreetgakIk 34 
                 +n+ eIr+ t+  I+
  KHJ34604.1 572 KNLEEIRQ-TNHEID 585
                 5899****.988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (701 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       972  (0.0542138); expected 358.6 (0.02)
Passed bias filter:                      514  (0.0286686); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.19s 00:00:00.82 Elapsed: 00:00:00.36
# Mc/sec: 5893.82
//
Query:       KHJ34605.1  [L=308]
Description: putative ribosome biogenesis protein brx1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.8e-40  136.9   0.3    1.1e-39  136.5   0.3    1.1  1  Brix            Brix domain
  ------ inclusion threshold ------
       0.06   13.6   0.1       0.23   11.8   0.0    1.9  2  Glyco_hyd_101C  Glycosyl hydrolase 101 beta sandwich domain


Domain annotation for each model (and alignments):
>> Brix  Brix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.5   0.3   1.3e-43   1.1e-39       1     192 [.      34     233 ..      34     234 .. 0.77

  Alignments for each domain:
  == domain 1  score: 136.5 bits;  conditional E-value: 1.3e-43
                 BTT--HHHHHHHHHHHHHCTTSEEEEEE..ECT..-TTTHHHHHHH-HHHHHHHH..HCTCSEEEEEE..SSTTEEEEEEEEECECTGGGSTTTSTS-T CS
        Brix   1 grktssrlrqllkdlrslmkphtasflk..rns..nklkdlvelagvthlellse..kndcslfvfelskkrPngptlefkvenyslmkdlkkakktef 93 
                 +r+++ r r+llkd+ sl+ ph+ +  k   +s  ++l +l  + +  +++++    ++d ++ +++     Pngpt++++ +n+++m++l+ ++++++
  KHJ34605.1  34 SRGITFRQRHLLKDIASLL-PHSRKDAKldTKSklYQLNELADMYNCNNILFFEArkAKDLYIWMSK----APNGPTVKMHMQNLHTMEELHFTGNCLK 127
                 57889999***********.*****888753332333334333333666666666433333444444....6*************************** PP

                 T---EEEEES.....HHHHHHHHHHHHHH..SEEEG..-B-GG-SEEEEEEES.CCTTTECEEEEEEEEEE............E..STTTTECT..... CS
        Brix  94 gsrPllvfng....kenfkllksllqdlFrvpkislkspklsglrrvvlftaaenqetdktisfRhYaikl............kksgkklpnleke... 173
                 gsrP+l+f+     +++++ +k+l++++F vpk s ks k+ ++++v+ ft+a+    + +i++R+Y+ik                         +   
  KHJ34605.1 128 GSRPILSFDAsfdsEPHLQIIKELFLHIFGVPKGSRKS-KP-FIDHVMGFTLAD----N-KIWIRNYQIKEtessktddveivG-----------Ktkk 208
                 **********9*9999********************77.88.9********887....5.8********944555555555553...........0333 PP

                 ......T..EEEEEEESEEEEEEEE CS
        Brix 174 ......kkerveLeEiGPrfdLklr 192
                       k+++++L+EiGPrf+L+++
  KHJ34605.1 209 ktsdraKETEISLVEIGPRFVLTPI 233
                 333332588*************986 PP

>> Glyco_hyd_101C  Glycosyl hydrolase 101 beta sandwich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   2.5e-05      0.23      28      88 ..      16      72 ..       4      83 .. 0.75
   2 ?   -1.9   0.0      0.43   3.8e+03      11      34 ..     187     205 ..     181     260 .. 0.54

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 2.5e-05
                    -EEEEETTEE--EEEGGGG-EEEEETTEEEEETTEEEEEE-B-TTS-B--GGG-EEEEEES CS
  Glyco_hyd_101C 28 kvtvkkaatvtkeeeeayrertitlngktvlkgesyLlPWnadatgkkekadeeklYhynp 88
                    kv+ + + +++k++  + ++r it+  +++lk+ + LlP + +   +++ ++++klY  n 
      KHJ34605.1 16 KVS-SGSVKKNKQKVLILSSRGITFRQRHLLKDIASLLPHSRK---DAKLDTKSKLYQLNE 72
                    222.22334666777899**********************944...46677888***9886 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.43
                     SEEEEEEE.......---EEEEET CS
  Glyco_hyd_101C  11 yeitkweeeeiklengekvtvkka 34 
                     y+i + e+++      ++v+   +
      KHJ34605.1 187 YQIKETESSKT-----DDVEIVGK 205
                     44444433222.....11111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (308 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       623  (0.0347482); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2353.03
//
Query:       KHJ34606.1  [L=215]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (215 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       634  (0.0353617); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1614.96
//
Query:       KHJ34607.1  [L=479]
Description: putative mitogen-activated protein kinase spm1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-69  233.7   0.0    3.1e-69  233.3   0.0    1.2  1  Pkinase        Protein kinase domain
    6.5e-32  110.8   0.0    9.1e-32  110.3   0.0    1.2  1  Pkinase_Tyr    Protein tyrosine kinase
  ------ inclusion threshold ------
      0.011   14.7   0.0      0.046   12.6   0.0    1.9  1  Haspin_kinase  Haspin like kinase domain
      0.061   13.2   0.1       0.21   11.5   0.1    1.8  2  APH            Phosphotransferase enzyme family
      0.072   12.4   0.1       0.15   11.4   0.1    1.5  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.3   0.0   8.7e-73   3.1e-69       1     264 []      91     382 ..      91     382 .. 0.93

  Alignments for each domain:
  == domain 1  score: 233.3 bits;  conditional E-value: 8.7e-73
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEE....SSEEEEEEE--TTEBHHHHHHHHSS CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfee....kdelylvleyveggeladllerkgs 94 
                 y++ ++lG+G++G V  a+++et++ vA+Kk+ +   kk   k++lrEik+l++++ h+ni  ly++        +e yl  e++e++ la +++ ++ 
  KHJ34607.1  91 YTVTKELGQGAYGIVCAAINNETQEGVAIKKVTNVFSKKILAKRALREIKLLQHFRgHRNITCLYDMDIPrpmnFNETYLYEELMECD-LAAIIRSEQP 188
                 78899*************************************************************9776677799**********99.********** PP

                 --HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.....BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHH CS
     Pkinase  95 lseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.....ltsfvgtseYlAPEvl.keneyskkvDvWslGvil 187
                 l++++ +++++qil gl+y+Hs++++HrDlKp N+L++ + elKi+DFGla+ ++ + +     +t++v+t++Y+APE++ + ++y+k++DvWs+G+il
  KHJ34607.1 189 LTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSVDPEenagyMTEYVATRWYRAPEIMlSFQSYTKAIDVWSVGCIL 287
                 *****************************************************99998889******************9899**************** PP

                 HHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCT.SHH...HHHTTS...........................-HHHHHHHHHHT-SSGCCSTTHHHH CS
     Pkinase 188 yelltgkppfsgekgkekvekeldqlekilkilg.etkeklpeasei...........................seeakdllkkllkkdpkkRltaeel 258
                 +ell g+p f+   gk+     +dql +il+ilg +   + ++ s i                           +++a+dll+k+l+ dp++R+++e +
  KHJ34607.1 288 AELLGGRPFFK---GKD----YVDQLNQILHILGtP---NEETLSRIgspraqeyvrnlpympkkpfaqlfpnaNPDALDLLDKMLAFDPSSRISVEAA 376
                 ***********...655....788888899999952...222333334456777799****************************************** PP

                 HTSGGG CS
     Pkinase 259 lqhpyl 264
                 l+hpyl
  KHJ34607.1 377 LEHPYL 382
                 ****97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.3   0.0   2.5e-35   9.1e-32       3     203 ..      93     294 ..      91     319 .. 0.86

  Alignments for each domain:
  == domain 1  score: 110.3 bits;  conditional E-value: 2.5e-35
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH.HHHHHHHHHHHHTS.-BTTB--EEEEEE....SSSSEEEEEE--TTEBHHHHHHH CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee.keelleeakimkkl.khpnivkllgvct....keepllivteyvkgGdLlkfLrk 94 
                  ++k+lG+Ga+G V+ +  +    ++++ Va+K++++  +++   ++ l+e+k+++++  h+ni  l+ + +    + +++++  e+++  dL   +r+
   KHJ34607.1  93 VTKELGQGAYGIVCAAINN----ETQEGVAIKKVTNVFSKKIlAKRALREIKLLQHFrGHRNITCLYDMDIprpmNFNETYLYEELMEC-DLAAIIRS 185
                  679************9999....89999******8877666548999**********99**********99665555668998888875.9******9 PP

                  TCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE.EETTSSTSGGGGS.-HHHH.HHSEEEHHHHHH CS
  Pkinase_Tyr  95 kekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey.vkkeeaklpvkWm.apEsl.kekkftsksDvW 189
                  +  ++lt  +  sf++q+ +G++y++s +++Hrdl   N L++ +   ki+DfGLar  + d e      ++ +  +W+ apE++ + +++t++ DvW
   KHJ34607.1 186 E--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSVDPEEnAGYMTEYVATRWYrAPEIMlSFQSYTKAIDVW 281
                  8..9******************************************************9777776245566779999988***8715567******** PP

                  HHHHHHHHHHTTSS CS
  Pkinase_Tyr 190 sfGvllwEiftlge 203
                  s G +l E++  g+
   KHJ34607.1 282 SVGCILAELLG-GR 294
                  ********975.44 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.3e-05     0.046     230     256 ..     215     241 ..     104     254 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.3e-05
  Haspin_kinase 230 HRdLhldniLvdknlnvtlidlklsRl 256
                    HRdL+ +n Lv++  +  ++d+ l+R 
     KHJ34607.1 215 HRDLKPGNLLVNADCELKICDFGLARG 241
                    *************************95 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.87   3.1e+03      34      76 ..     132     177 ..     125     198 .. 0.64
   2 ?   11.5   0.1   5.8e-05      0.21     168     196 ..     213     239 ..     205     240 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.87
                 HHHHHHHHHHHHHHHHTT-.......B--B-CTTBS-EEETTEEEEEEE- CS
         APH  34 aeeirrevallrlLakagv.......pvPevlagdtddeeigllfaliey 76 
                 a ++ re +ll++++++          +P++  +    +e +l+ +l+e 
  KHJ34607.1 132 AKRALREIKLLQHFRGHRNitclydmDIPRPMNF----NETYLYEELMEC 177
                 5677889999999997755555544446666663....455555555555 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 5.8e-05
                 EE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 168 llHgDlhpgNllvdpddgrvtGviDfeda 196
                 +lH+Dl+pgNllv+ +d ++  + Df++a
  KHJ34607.1 213 VLHRDLKPGNLLVN-ADCEL-KICDFGLA 239
                 79************.55666.58888877 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1   4.1e-05      0.15     103     165 ..     177     235 ..     115     241 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 4.1e-05
         Kdo 103 qdLedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliD 165
                  dL++++++ + l ++  +  + ++    + +h+a+v H+dl + n+l++++     e+ + D
  KHJ34607.1 177 CDLAAIIRSEQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC----ELKICD 235
                 4899999985559999999999999999*********************9987....444555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.28s 00:00:00.80 Elapsed: 00:00:00.44
# Mc/sec: 3273.40
//
Query:       KHJ34608.1  [L=337]
Description: putative nadph-dependent methylglyoxal reductase gre2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.2e-16   59.7   0.0    3.2e-16   59.2   0.0    1.2  1  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
    2.2e-16   60.0   0.0    3.4e-16   59.5   0.0    1.3  1  Epimerase        NAD dependent epimerase/dehydratase family
    2.6e-09   36.6   0.1    2.2e-08   33.6   0.1    2.0  1  NAD_binding_4    Male sterility protein
    4.5e-09   36.2   0.3    1.1e-08   34.9   0.3    1.8  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
    1.1e-07   32.0   0.1      5e-07   29.8   0.0    2.0  2  NAD_binding_10   NAD(P)H-binding
    2.2e-06   27.0   0.2    3.3e-06   26.5   0.2    1.2  1  Polysacc_synt_2  Polysaccharide biosynthesis protein
    0.00041   20.9   0.3     0.0017   18.9   0.0    2.2  3  F420_oxidored    NADP oxidoreductase coenzyme F420-dependent
    0.00078   19.4   0.2     0.0018   18.2   0.2    1.6  1  KR               KR domain
     0.0024   17.4   0.0     0.0052   16.3   0.1    1.7  2  adh_short        short chain dehydrogenase
  ------ inclusion threshold ------
      0.012   15.8   0.3      0.028   14.7   0.1    1.7  2  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma
      0.013   15.0   0.2      0.053   13.1   0.1    2.0  2  NmrA             NmrA-like family
       0.02   14.0   0.1       0.12   11.5   0.0    2.1  2  RmlD_sub_bind    RmlD substrate binding domain


Domain annotation for each model (and alignments):
>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.2   0.0   2.2e-19   3.2e-16       2     229 ..       6     253 ..       5     273 .. 0.75

  Alignments for each domain:
  == domain 1  score: 59.2 bits;  conditional E-value: 2.2e-19
   3Beta_HSD   2 vtGgaGFlGralvkeLvrlee..lkevrvlDlres.pelleelskvnvkkviegDvtdkdkleeal..egvdvvihlaslvdvagkltedeimkvnvkG 95 
                 +tGg+GF+ +++ + L++ ++  + +vr+  ++ + +  le++ +++ +  i  D+ +    +eal  eg +vvih+as  ++  k+ ++ + +  + G
  KHJ34608.1   6 LTGGSGFIAAHILNLLLEHGHnvITTVRSDEKASKiKAALESTASSRLDFKIIEDIAQPGAFDEALkiEGLEVVIHTASPFQLNVKDVKKDLLDPAIIG 104
                 79****************99877788998877665144567777777776999************6447***************99999999******* PP

   3Beta_HSD  96 Trnvleacvka..gvrvlvYtSsaevvgp.nsl.geeilngdEeleyesl.......hqdaypesKalaEklvlkaNgrtlkngg.rlyTcaLRpagiy 182
                 T+ +l a +k   +v++++ tSs  ++ + n+   ++ +   E+   + +       +   y  sK  aE++     +  +kn + ++    + p  +y
  KHJ34608.1 105 TQGILTAIKKYapSVKKVIITSSFAAIIDvNKAtDDPTVVYTEKSWNPITesqalenPALGYRASKTFAERAA---WE-FIKNEKpNFTISTINPPLVY 199
                 *******9986448**********99987343313444445555443333122333355669999****9864...44.7888888999999******* PP

   3Beta_HSD 183 Gegdkllvpllkqlaklglalfkigdeevlsd........rvYvgNvawahilAa 229
                 G+ ++ l ++l +l  +++ +++i + + ++d        +v v  va ahi A 
  KHJ34608.1 200 GPISHCL-NSLDKLNTSNKYIYEIMSGKRKNDvlnvrptlWVDVRDVALAHIKAF 253
                 **99876.55666666666777776666655533345555778888999998775 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.5   0.0   2.2e-19   3.4e-16       1     231 [.       4     258 ..       4     267 .. 0.73

  Alignments for each domain:
  == domain 1  score: 59.5 bits;  conditional E-value: 2.2e-19
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC.........EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl.........elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfiek 90 
                 +l+tG++Gfi +++++ lle+g++vi+  r  ++++++ ++ l           +  d+ ++ a+++++k e+ ++vih A     ++  + ++d+++ 
  KHJ34608.1   4 VLLTGGSGFIAAHILNLLLEHGHNVITTVRS-DEKASKIKAALestassrldFKIIEDIAQPGAFDEALKIEGLEVVIHTASPFQLNV-KDVKKDLLDP 100
                 699*********************8877777.333333333346799**997555669**********************88555554.34457999** PP

                 HTHHHHHHHHHHHHH..TCTEEEEEEE.GGGGT.....SCSSSS........BSTCSTTS--.--SSHHHHHHHHHHHHHHHHHHHH..T-EEEEEEES CS
   Epimerase  91 nlqgtlnlleaarka..gvkrllflsS.sevYG.....kdaeqp........keettltgpl.kpnspYaaaKlageklveayaaqy..glnaiilrlf 170
                  ++gt+ +l a++k+   vk+++  sS +++       +    p         +  t+++ l +p   Y a+K+ +e+ ++++ +    ++ + ++++ 
  KHJ34608.1 101 AIIGTQGILTAIKKYapSVKKVIITSSfAAIIDvnkatD---DPtvvyteksWNPITESQALeNPALGYRASKTFAERAAWEFIKNEkpNFTISTINPP 196
                 ***************77788*******666666443331...345554332222233444669********************9888345667779*** PP

                 EEESTT...S-TTSTTSHHHHHHHHHHTTSSSEEEETTST-EEE..EEEHHHHHHHHHHHHHHHTT CS
   Epimerase 171 nlyGpr...ngegevsrvipalirkilegkqevtllgdgtalRd..flyveDvaeaillvlehvda 231
                  +yGp        +  +   ++i  i +gk      +d  ++R+  +++v+Dva a++ + e  +a
  KHJ34608.1 197 LVYGPIshcLNSLDKLNTSNKYIYEIMSGK----RKNDVLNVRPtlWVDVRDVALAHIKAFELDEA 258
                 ******654333335555567777777777....44555566664489999********9998443 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.6   0.1   1.4e-11   2.2e-08       1     209 [.       6     207 ..       6     245 .. 0.71

  Alignments for each domain:
  == domain 1  score: 33.6 bits;  conditional E-value: 1.4e-11
                    EE-TTSHHHHHHHHHHHHHS-.TEEEEEE-SSSHHHHHHHHHHHT-SS-HHHHHHHHHTTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--S CS
  NAD_binding_4   1 lTGaTGFLGkvLlekLLrttpevkiyllvRaksgesaeeRleeelekkelfsallkelaerikvveGDlseprlGLseedlqelaeevdviihsaA 96 
                    lTG++GF+++++l+ LL+     +++  vR++++   + +++++le++   s+l        k+   D+++p     + d    +e ++v+ih a 
     KHJ34608.1   6 LTGGSGFIAAHILNLLLEHGH--NVITTVRSDEK---ASKIKAALESTAS-SRLD------FKI-IEDIAQPG----AFDEALKIEGLEVVIHTAS 84 
                    8****************9998..7******9977...7788555555544.4443......344.45*****8....33333346899******** PP

                    S-S.ST..TSSEEHHHHHHHHHHHHHHHTSSS--..-EEEEEE..GGGTTS-TTT--SSS-H......HHH--EEEETTTCCCHHHHHHHHHHHHH CS
  NAD_binding_4  97 tvnfde..pykellrvNveGtrevlelakklkkl.kvllhvST..ayvngeregeveekvyeegekeekldederaklkglpntYeqsKalaEklv 187
                      +++     k+ll++ + Gt+ +l+  kk +   k ++  S+  a+++ ++ +    +++    ++     +e + l++ + +Y  sK  aE+  
     KHJ34608.1  85 PFQLNVkdVKKDLLDPAIIGTQGILTAIKKYAPSvKKVIITSSfaAIIDVNKATD---DPTVVYTEKSWNPITESQALENPALGYRASKTFAERAA 177
                    876654216778*****************87665477888888766666666654...3333344666677777888888889***********99 PP

                    HHHHHHH..---EEEEEE-EEE-......- CS
  NAD_binding_4 188 rearrrs..glpvvivRpsiitg......e 209
                     e  +++  ++ ++ + p+ ++g      +
     KHJ34608.1 178 WEFIKNEkpNFTISTINPPLVYGpishclN 207
                    998766411566888999999996654432 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.9   0.3   7.4e-12   1.1e-08       1     129 [.       5     127 ..       5     331 .. 0.73

  Alignments for each domain:
  == domain 1  score: 34.9 bits;  conditional E-value: 7.4e-12
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHTTSHH CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklhkgDltDssslerllaevqpdevynLAAqshVdvsfekPe 96 
                    L TG++Gfi +++++lLle g++v+ +vr +++  +++i++  ++   + + ++k+++ D+    + +++l+    + v++ A     +v+  k +
     KHJ34608.1   5 LLTGGSGFIAAHILNLLLEHGHNVITTVRSDEK--ASKIKAALESTA-SSRLDFKIIE-DIAQPGAFDEALKIEGLEVVIHTASPFQLNVKDVK-K 95 
                    78**********************999988776..456666555443.3344666665.*************************9999987666.8 PP

                    HHHHHHTHHHHHHHHHHHHCT..TTSEEEEEEE CS
  GDP_Man_Dehyd  97 ytaevnvlGtlrLLeairalglekkvrfyqaSt 129
                      ++  ++Gt+ +L ai+++  +  ++++++S+
     KHJ34608.1  96 DLLDPAIIGTQGILTAIKKYAPS-VKKVIITSS 127
                    99*****************9643.334444443 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.0   3.4e-10     5e-07       1     110 [.       8     139 ..       8     190 .. 0.70
   2 ?   -0.4   0.0      0.62   9.3e+02      90     177 ..     260     279 ..     213     289 .. 0.65

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 3.4e-10
                     TTTSHHHHHHHHHHHHC-T-EEEEEETTHHHCHHHHCT.T.....TCEE.EE--TT-CCHHHHHHT..T-SEEEES---TCC...HHHH...... CS
  NAD_binding_10   1 GAtGkvGrllvkellargghevtalvRnpeklaeleae.e.....glev.vegdvtdvedlaealk..gadaVvsalggggk...deeg...... 77 
                     G++G ++ ++++ ll++ gh+v   vR+ ek+++++a+ e     +l+  +  d+ ++ +  ealk  g ++V+ ++++ +    d  +      
      KHJ34608.1   8 GGSGFIAAHILNLLLEH-GHNVITTVRSDEKASKIKAAlEstassRLDFkIIEDIAQPGAFDEALKieGLEVVIHTASPFQLnvkD--Vkkdlld 99 
                     9****************.5*************9887442200011333212235566667777775669********776665441..2334577 PP

                     .....HHHHHHHHHH..CT--EEEEEEETTTTSGCGCHHH CS
  NAD_binding_10  78 .....aknivdaake..agvkRfvlvsaigvgdevpgefg 110
                          ++ i++a k+    vk++++ s++ +  +v+++++
      KHJ34608.1 100 paiigTQGILTAIKKyaPSVKKVIITSSFAAIIDVNKATD 139
                     77899*********84357*********887555554443 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.62
                     --EEEEEEETTTTSGCGCHHHHHHHHCCHHHHHHHHHHHHHHHHSSSEEEEEEE-CEE-ST--SEEEEETTSS----EEEHHHHHHHH CS
  NAD_binding_10  90 vkRfvlvsaigvgdevpgefgewnkellkaylaakraaeellrasgldwTivrpggLtdepttkyrvvekgepfkggsisradVAdvl 177
                      kR+ +v                                                                    +g+ s +dVA+v+
      KHJ34608.1 260 GKRLFVV--------------------------------------------------------------------TGQKSEQDVAEVI 279
                     3333333....................................................................4455666666665 PP

>> Polysacc_synt_2  Polysaccharide biosynthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.2   2.2e-09   3.3e-06       1     136 [.       4     135 ..       4     142 .. 0.86

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 2.2e-09
                      EEEETTTSHHHHHHHHHHHHHB-SEEEEEES-HHHHHHHHHH......-TTEEEE....E--TT-HHHHHHHTT..T-SEEEE------HHHHH CS
  Polysacc_synt_2   1 vlvtGagGsiGselvrqilkkkpkkiillerdElklyeiekeleeelkkkklkveivpvigdvrdkerlekaleelkvdvvfhaAAlKhVPlve 94 
                      vl+tG++G i  ++++ +l++  + i  + +dE k  +i+  le ++++++l+++   +i d+++    ++al+  + +vv+h+A   ++ + +
       KHJ34608.1   4 VLLTGGSGFIAAHILNLLLEHGHNVITTVRSDE-KASKIKAALE-STASSRLDFK---IIEDIAQPGAFDEALKIEGLEVVIHTASPFQLNVKD 92 
                      89**************99999988887777776.5689999995.5556699888...9****************************9998655 PP

                      HSHHHHHHHHHHHHHHHHHHHHHT..T-SEEEEEEEGGGSS--S CS
  Polysacc_synt_2  95 enpleaiktNvlgtenvieaaiea..gvkkvvliStDKAvnPtn 136
                          + ++  ++gt+ +++a +++   vkkv++ S+  A+  +n
       KHJ34608.1  93 -VKKDLLDPAIIGTQGILTAIKKYapSVKKVIITSSFAAIIDVN 135
                      .56799*************99887446******99977776655 PP

>> F420_oxidored  NADP oxidoreductase coenzyme F420-dependent
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.0   1.1e-06    0.0017       6      52 ..       9      51 ..       4      89 .. 0.89
   2 ?   -2.5   0.0       5.2   7.8e+03      62      81 ..     119     138 ..     105     142 .. 0.70
   3 ?   -3.2   0.0       8.9   1.3e+04      29      57 ..     266     294 ..     258     299 .. 0.56

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 1.1e-06
                   TTSHHHHHHHHHHHHTTS-GGCEEEEEESSCCCHHHHHHHHC-EEEC CS
  F420_oxidored  6 GaGnmgealasgllaagaqpheivvansrnpekaeelaeelgvkvta 52
                   G+G +++ +++ ll++g   h+++ ++ r+ eka +++++l+ ++++
     KHJ34608.1  9 GSGFIAAHILNLLLEHG---HNVI-TTVRSDEKASKIKAALESTASS 51
                   99***************...****.77*************9966554 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 5.2
                    -SEEEE-S-HHHHHHHHHHC CS
  F420_oxidored  62 advvvlavkpedveevlsel 81 
                     + v+++  ++++ +v ++ 
     KHJ34608.1 119 VKKVIITSSFAAIIDVNKAT 138
                    45677888888888887765 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 8.9
                    EEEEESSCCCHHHHHHHHC-EEECECHHH CS
  F420_oxidored  29 vvansrnpekaeelaeelgvkvtavdnee 57 
                    v + +++++ ae +++++   +   +n +
     KHJ34608.1 266 VTGQKSEQDVAEVIRKNFPSLAANLPNLD 294
                    44545555555556666665555555555 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.2   1.2e-06    0.0018       3     142 ..       4     133 ..       2     139 .. 0.81

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 1.2e-06
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT-- CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleemt 101
                 +l+tGG G ++ ++ + l+e+g  +++ + Rs ++ ++ ka +++ +++  + ++++ D++++ a  ++l+      + ++ vih+A  ++ +      
  KHJ34608.1   4 VLLTGGSGFIAAHILNLLLEHGH-NVITTVRSDEKASKIKAALESTASSRLDFKIIE-DIAQPGAFDEALKI-----EGLEVVIHTASPFQLNV----- 90 
                 69********************7.566777887888999999999999999999999.*****999998853.....36999999998766543..... PP

                 HHHHHHHHTTTTHHHHHHHHHTTT..S--SEEEEEEEHHHHH- CS
          KR 102 aedleqvlapKvkGawnLhelled..esldffvlfSSiagllg 142
                 ++  + +l p + G++ + +++++   s++ ++++SS a+++ 
  KHJ34608.1  91 KDVKKDLLDPAIIGTQGILTAIKKyaPSVKKVIITSSFAAIID 133
                 3444567888888888888888887778888899999888876 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.1   3.5e-06    0.0052       2      51 ..       3      53 ..       2     130 .. 0.85
   2 ?   -3.7   0.0       4.5   6.7e+03     149     182 ..     166     198 ..     164     204 .. 0.66

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 3.5e-06
                EEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT.TSEE CS
   adh_short  2 vvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee.gaka 51
                 vl tG+s+ I   i + l++ G +v+ + rs+ek+ ++++ l+++ ++++
  KHJ34608.1  3 KVLLTGGSGFIAAHILNLLLEHGHNVITTVRSDEKASKIKAALESTaSSRL 53
                599****************************************99864333 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 4.5
                 HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB CS
   adh_short 149 YsAsKaavagltrslakelaptgirvnavaPGlv 182
                 Y AsK + +  + ++ k  +p + ++++++P+lv
  KHJ34608.1 166 YRASKTFAERAAWEFIKNEKP-NFTISTINPPLV 198
                 778887776666666666555.367777777766 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.1   1.8e-05     0.028       3      81 ..       6      87 ..       4      94 .. 0.74
   2 ?   -2.8   0.0       4.8   7.2e+03      45      61 ..     296     312 ..     268     330 .. 0.61

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.8e-05
                     EE--.SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHH...TTTCEEEEE-.-TTTHHHHHHHHHTTS..SEEEE-SSGGG CS
  Sacchrp_dh_NADP  3 iiGa.GsvGqavaellarhfdvdaeitvadrskeklealaaka...lgvrfeaial.daenyeavLaallkeg..dlvvnlsppis 81
                     + G+ G+++  ++ ll++h++    ++   rs+ek+ +++a++   +++r++++ + d++++ a  +++lk    ++v++ + p++
       KHJ34608.1  6 LTGGsGFIAAHILNLLLEHGHN---VITTVRSDEKASKIKAALestASSRLDFKIIeDIAQPGA-FDEALKIEglEVVIHTASPFQ 87
                     55666**************985...888888888888888777777666666666525555555.777766555699999998884 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 4.8
                      TTTCEEEEE--TTTHHH CS
  Sacchrp_dh_NADP  45 lgvrfeaialdaenyea 61 
                      +++++++++ d ++ +a
       KHJ34608.1 296 AQPKVDSYKYDNSDTTA 312
                      45566666666666655 PP

>> NmrA  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   3.5e-05     0.053       1      40 [.       4      41 ..       4     147 .. 0.77
   2 ?   -0.5   0.0      0.49   7.3e+02     181     224 ..     240     282 ..     214     285 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.5e-05
                EEESSTTSHHHHHHHHHHHHHT-EEEEEES-S-SHHHHHH CS
        NmrA  1 IlviGaTGrqGksvvrallkaghkvralvRdtkselaksl 40
                +l +G++G +++++ + ll++gh+v   vR  ++  a ++
  KHJ34608.1  4 VLLTGGSGFIAAHILNLLLEHGHNVITTVRSDEK--ASKI 41
                6889**************************8733..3333 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.49
                 -HHHHHHHHHHHHHHHHHHHTTEEEEE-SEEE-HHHHHHHHHHH CS
        NmrA 181 daeeDiGafvikilkdprklkgkriklagntlsgneivelfekk 224
                 ++++D++ + ik+++  ++++gkr+ + +   s ++++e++ k+
  KHJ34608.1 240 VDVRDVALAHIKAFE-LDEASGKRLFVVTGQKSEQDVAEVIRKN 282
                 788999999999997.5677899999999999999999998875 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     8e-05      0.12       2      59 ..       3      83 ..       1     146 [. 0.90
   2 ?    0.3   0.0      0.21   3.1e+02     182     248 ..     235     300 ..     222     333 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 8e-05
                   EEEEESTTSHHHHHHHHHCTTTSEEEEEE-TT.......................T--TTSHHHHHHHHHHH--SEEEE-- CS
  RmlD_sub_bind  2 kilvtGanGqlGseLakqlaeeglevlaltre.......................eldltdaeavaellkeakpdvvvnaA 59
                   k+l+tG++G ++ ++ ++l e+g++v+++ r+                         d++++ a +e+lk    +vv+++A
     KHJ34608.1  3 KVLLTGGSGFIAAHILNLLLEHGHNVITTVRSdekaskikaalestassrldfkiIEDIAQPGAFDEALKIEGLEVVIHTA 83
                   79***************************9997888888888888888888887777888888888888888888888887 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.21
                    --EEHHHHHHHHHHHHHHCHH.GGG.-EEEE---BS-EEHHHHHHHHHHHHCHTTSEEEEE-CCCS-- CS
  RmlD_sub_bind 182 sPTsardlAevllqllekaaeekel.agvyHlanegetswlefArailkeagadseevkpistaeypt 248
                    +PT   d+ +v l+ +++   +++  ++++  + +g+ s  ++A++i k++ + ++++   +ta+   
     KHJ34608.1 235 RPTLWVDVRDVALAHIKAFELDEASgKRLF--VVTGQKSEQDVAEVIRKNFPSLAANLPNLDTAQPKV 300
                    577777777776666666655444435555..445566999999999999888777777766666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       716  (0.0399353); expected 358.6 (0.02)
Passed bias filter:                      571  (0.0318478); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.44
# Mc/sec: 2280.72
//
Query:       KHJ34609.1  [L=2116]
Description: putative glutamate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.7e-178  593.7   0.0   2.2e-178  593.3   0.0    1.2  1  GATase_2         Glutamine amidotransferases class-II
   7.8e-156  518.8   0.0   1.3e-155  518.2   0.0    1.3  1  Glu_synthase     Conserved region in glutamate synthase
   5.8e-111  370.4   0.0   4.8e-109  364.2   0.0    2.2  2  Glu_syn_central  Glutamate synthase central domain
    6.6e-85  283.5   2.8    1.1e-84  282.8   2.8    1.3  1  GXGXG            GXGXG motif
    1.1e-22   80.6   0.1    4.7e-22   78.6   0.1    2.0  1  Pyr_redox_2      Pyridine nucleotide-disulphide oxidoreductas
    2.4e-21   75.6   0.0    4.6e-21   74.7   0.0    1.5  1  Fer4_20          Dihydroprymidine dehydrogenase domain II, 4F
    3.7e-08   33.5   0.0    1.5e-07   31.5   0.0    2.1  1  NAD_binding_8    NAD(P)-binding Rossmann-like domain
    6.2e-07   29.3   0.4    0.00066   19.4   0.1    2.5  2  DAO              FAD dependent oxidoreductase
    7.6e-07   29.6   0.0    0.00089   19.8   0.0    2.9  2  Pyr_redox        Pyridine nucleotide-disulphide oxidoreductas
      1e-05   25.1   0.0    1.9e-05   24.2   0.0    1.5  1  Amino_oxidase    Flavin containing amine oxidoreductase
    1.4e-05   24.6   0.1      0.034   13.4   0.0    3.3  3  Pyr_redox_3      Pyridine nucleotide-disulphide oxidoreductas
    6.7e-05   21.8   0.8    0.00012   21.0   0.0    1.7  2  HI0933_like      HI0933-like protein
     0.0012   18.1   0.2     0.0062   15.7   0.1    2.2  2  FAD_binding_2    FAD binding domain
     0.0019   18.2   0.0     0.0047   16.9   0.0    1.6  1  NAD_Gly3P_dh_N   NAD-dependent glycerol-3-phosphate dehydroge
     0.0035   16.6   3.0      0.011   15.0   0.1    2.8  3  Thi4             Thi4 family
     0.0081   15.4   0.0      0.017   14.4   0.0    1.4  1  FAD_binding_3    FAD binding domain
  ------ inclusion threshold ------
      0.013   14.9   0.0      0.013   14.9   0.0    1.6  2  FAD_oxidored     FAD dependent oxidoreductase
      0.024   13.7   0.1       0.39    9.7   0.1    2.6  3  Lycopene_cycl    Lycopene cyclase protein
      0.024   15.1   0.2        4.8    7.7   0.1    2.8  2  NAD_binding_7    Putative NAD(P)-binding
      0.058   12.4   0.7       0.19   10.7   0.7    1.9  2  FMN_dh           FMN-dependent dehydrogenase
       0.14   12.3   0.9        5.3    7.1   0.1    2.6  2  AdoHcyase_NAD    S-adenosyl-L-homocysteine hydrolase, NAD bin
       0.16   11.3   0.0       0.45    9.9   0.0    1.7  1  2-Hacid_dh_C     D-isomer specific 2-hydroxyacid dehydrogenas
        0.2   11.5   1.8        9.8    6.0   0.0    3.0  3  Rossmann-like    Rossmann-like domain


Domain annotation for each model (and alignments):
>> GATase_2  Glutamine amidotransferases class-II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  593.3   0.0  2.9e-181  2.2e-178       1     420 []      54     486 ..      54     486 .. 0.97

  Alignments for each domain:
  == domain 1  score: 593.3 bits;  conditional E-value: 2.9e-181
                 -EEEEEE-SSS--BSHHHHHHHHHHHHGGGGS-B-TTSSSBSEEEEEEE--HHHHHHHHHH.TT-----GGG-EEEEEEE-SSHHHHHHHHHHHHHHHH CS
    GATase_2   1 CGvgfiaelkgkkshkivekalealenleHRGavgadektGDGaGillqiPdeflrkeake.kgielpeageyavgmlflpkdeekaeeakkileeive 98 
                 CGvgf +++kg +shkiv++a ++l+n++HRGavg+d+++GDGaG++++iP++f+ k++++ ++++lp +g+yavg+lf++ dee+ +++k +le+i+e
  KHJ34609.1  54 CGVGFTCNIKGVASHKIVSDARNLLCNMTHRGAVGSDARDGDGAGVMTSIPHKFFIKNFEReTNVKLPLQGQYAVGNLFFKPDEETLQKSKIQLEKIAE 152
                 **********************************************************987699*********************************** PP

                 HTT-EEEEEEE--B-GGGS-HHHHHH--EEEEEEE.........E-TT-.....--HHHHHHHHHHHHHHHGGG.....-BTTBEEEEEESSEEEEEES CS
    GATase_2  99 eeglevlgwRevpvdksvlgeaakesePsieqvfv.........ekked.....lseeelerklyviRkriekeiakkkaekefYicslssrtivYkgl 183
                 + gl+vlgwR+vp d++ lg aa ++eP+i q fv         ++++d     ++e+++er+l+++Rkr+++++     +++fYicsls+++ivYkg+
  KHJ34609.1 153 TLGLRVLGWRQVPKDSTLLGPAAASREPVILQPFVvlrsaydlsNSPQDidpvdFDERHFERQLFILRKRATHAVG---LQNWFYICSLSNKNIVYKGQ 248
                 **********************************9888777776223326666799******************98...89****************** PP

                 S-GGGHHHHBHGGGSTT--BSEEEEEE---SSSS--GGGSSS-SSEEEEE--TTHHHHHHHHHHHCTT--BT-HH.HHHTC--S--TTS-HHHHHHHHH CS
    GATase_2 184 ltseqlkefykdlkdeelesalalvHsRfstntfPsWelaqPlRllaHnGEintlrGnknwmkareaelksellgdelekllPivneegsDsasldnvl 282
                 l ++q+ +++ dl ++++e ++alvHsRfstntfPsW++aqPlR++aHnGEintlrGnknwm+are  ++se++gd+le+l+Pi++e+gsDsa++dnvl
  KHJ34609.1 249 LSPSQVYDYFYDLVNADYEVHFALVHSRFSTNTFPSWDRAQPLRWVAHNGEINTLRGNKNWMRAREGLMASEVFGDDLESLYPIIEEGGSDSAAFDNVL 347
                 *************************************************************************************************** PP

                 HHHHHTT.--HHHHHHHHS----TT-GGGTHHHHHHHHHHTTT-----SSEEEEEE-SSEEEEEE-TT--S--EEEEETT--EEEESSTTSS---GGGE CS
    GATase_2 283 ellvlsg.rslaealmlliPeawennksldkekkafyeyasalmepWDGPalivftdGkvvgavLDRnGLRPaRylvtkddlvvlasEvGvldleeeev 380
                 ell+ +g  sl+ea+ml++Peawe n+ +d+ k+afye+a++lmepWDGPal++f+dG+++ga+LDRnGLRP+R+++t+dd++++asEv +l++++e++
  KHJ34609.1 348 ELLTINGvLSLPEAIMLMVPEAWEGNALMDPAKTAFYEWAACLMEPWDGPALFTFSDGRYCGANLDRNGLRPCRFYITDDDRIICASEVTTLNINPEKI 446
                 *******88****************************************************************************************** PP

                 EEEEE--TT-EEEEETTTTEEEEHHHHHHHHHTTS-HHHH CS
    GATase_2 381 vekgrlqPGrmllvdleegriledeeikkkiaskkpykew 420
                 ++kgrlqPG+mllvd+  gri++d e+kk+++ ++++++w
  KHJ34609.1 447 IHKGRLQPGKMLLVDTLAGRIIDDGELKKTVSMRYDFGSW 486
                 **************************************99 PP

>> Glu_synthase  Conserved region in glutamate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  518.2   0.0  1.6e-158  1.3e-155       2     368 .]     871    1240 ..     870    1240 .. 0.99

  Alignments for each domain:
  == domain 1  score: 518.2 bits;  conditional E-value: 1.6e-158
                    SS-HHHHHHHHHHHHH---HHHHHHHHHHHTS.-S-SGGGGEEE--SS--.--GGGS--HHHHHTTEE---B-TTTS-HHHHHHHHHHHHHHT-B CS
  Glu_synthase    2 rneievikllqkavqveskesidkyrekleerevlkakrdlleldaaeealikleevepalkikkriltsamSyGalseeahealakamnrlgtk 96  
                     n+++ i+ +q+av++++++s++ y+ +  e+++ +++r +l+++++e++ +++++vep+++i++r++t+amSyG++s+eah++la+amnrlg+k
    KHJ34609.1  871 INDPTSIANIQDAVRTKNDKSYEAYSISEYEQIKSCTLRGMLDFKFDESTPVPINQVEPWTEIVRRFCTGAMSYGSISMEAHSTLAIAMNRLGGK 965 
                    577888999*****************************************9******************************************** PP

                    -EETTS---GGGGS-----.....SEEEE-TT-TT--HHHHHH-SEEEEE---TTSTTS--EE-GGG--HHHHHHHTS-TT--EE--SS-TT-SS CS
  Glu_synthase   97 sntGEGGedeerlktakdv.....aikQvasgrFGvteeyLnnakaleikiaQGakpgeGgqlpgeKvseeiakiRkikpgvdliSPaphhdiys 186 
                    sntGEGGed+er +  ++      aikQvasgrFGvt++yL ++++l+ik+aQGakpgeGg+lpg+Kvs++ia++R+++pgv+liSP+phhdiys
    KHJ34609.1  966 SNTGEGGEDPERSERMSNGdtmrsAIKQVASGRFGVTSNYLADSDELQIKMAQGAKPGEGGELPGHKVSKSIARTRHSTPGVGLISPPPHHDIYS 1060
                    ***************9999999************************************************************************* PP

                    HHHHHHHHHHHHHH-TTSEEEEEEE-STTHHHHHHHHHHTT-SEEEEE-TT---SSEEHHHHHHB---HHHHHHHHHHHHHHTT-GGG-EEEEES CS
  Glu_synthase  187 iedlaqliedLkevnkeakvsvKlvaeagvetiaagvakanadiilidGleGGTGAspkssikhaGlPlelalaevdqtlkeeglrdrvsliadG 281 
                    iedl+qli+dLk+ n++a++svKlv+e+gv+++a+gvaka+ad+ili+G++GGTGAs+++ ik+aGlP+el+lae++qtl+ ++lr rv++++dG
    KHJ34609.1 1061 IEDLKQLIYDLKCSNPRARISVKLVSETGVGVVASGVAKAKADHILISGHDGGTGASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVIVQTDG 1155
                    *********************************************************************************************** PP

                    S--SHHHHHHHHHHT-SEEE-SHHHHHHTT--S---GGGT--TTSSS---HHHH..TT----HHHHHHHHHHHHHHHHHHHHHHT-S CS
  Glu_synthase  282 glktgadvvkalalGAdavgigtaalialgCimarvChtntCpvGvatqdpeLrkrlkveekaervvnyikalaeevrellaalgin 368 
                    +l+tg+dv++a +lGA+++g++t++lia+gC+ +r+Ch+ntCpvG+a+qdpeLr  +k+++++e+v+n+++++a+e+r ++a+lg++
    KHJ34609.1 1156 QLRTGRDVAIACLLGAEEWGFATTPLIAMGCVFMRKCHLNTCPVGIASQDPELR--KKFQGTPEHVINFFYYIANELRAIMAKLGFR 1240
                    ******************************************************..9****************************85 PP

>> Glu_syn_central  Glutamate synthase central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  364.2   0.0  6.2e-112  4.8e-109       4     279 .]     525     809 ..     523     809 .. 0.95
   2 ?    3.9   0.0      0.04        31     167     265 ..    1125    1243 ..    1094    1248 .. 0.74

  Alignments for each domain:
  == domain 1  score: 364.2 bits;  conditional E-value: 6.2e-112
                      HHTT--HHHHHHTHHHHHHHSS--EE-S---S--TTT-SS---GGGGEEE----SSS----TTTTGGG-B--EEES----SSS--GGGG-EEEE CS
  Glu_syn_central   4 kafgyteedlelllepmakegkeaigsmGdDtplavLsekprllydYFkqlfAqVTNPpiDpiREelvmsletllGkegnlleeeeeqakrlkl 97 
                      +afgy+ e+++lll+pma+++kea+gsmG+D+pla+L ++prlly+YF+qlfAqVTNPpiDpiRE++vmsl++++G++gnll+ +++q++rl l
       KHJ34609.1 525 AAFGYSFEQVSLLLAPMASDEKEALGSMGNDAPLACLAKEPRLLYEYFRQLFAQVTNPPIDPIREAMVMSLSSYVGPQGNLLKMDASQCRRLSL 618
                      79******************************************************************************************** PP

                      SSSB--HHHHHHH.....HHSSS-EEEEESEE.......SHHHHHHHHHHHHHHHHHTT-SEEEEESS--STTEEE--HHHHHHHHHHHHHHTT CS
  Glu_syn_central  98 esPiLteeeleklkkl.kekkefkaktlditfeae....aleealerlceeaeeavregaeilvLsDrkvseervpipslLavgavhhhLvrkg 186
                      +sPiL+  el++lk++ k +k++++k++d+tf++     ++ + l+++c++a++a++++ +i++LsDr++ ++r+p+++lLa+g vhhhLv ++
       KHJ34609.1 619 RSPILSIPELNSLKNItKIHKDWTVKVIDLTFPKCegtdGYIKHLDEICRQATAAIEHQDKIILLSDRATCADRLPVSALLACGMVHHHLVTNR 712
                      ***************9755789**********65566556****************************************************** PP

                      -GGG-EEEEEESS--SHHHHHHHHHTT-SEEEEHHHHHHHHHHHTTTS-....----HHHHHHHHHHHHHHHHHHHTT--BHHHHHHS--EEES CS
  Glu_syn_central 187 lrtkvslvvesgearevhhfavllgyGadavnPylaletieklveegal....aeeeleknyrkavekGllKimskmGistlqSYkgaqifeav 276
                       r+ ++l+ve++earevhh++vllgyGada+nPyla+e+i kl +eg +    ++++l +ny+ +++ G+lK+mskmGistl+SYkgaqifea+
       KHJ34609.1 713 WRSLAALIVETAEAREVHHMCVLLGYGADAINPYLAMECIMKLNREGLIkkklDDQTLIRNYKYSADGGILKVMSKMGISTLASYKGAQIFEAL 806
                      **********************************************9765444666666*********************************** PP

                      SB- CS
  Glu_syn_central 277 Gls 279
                      G++
       KHJ34609.1 807 GID 809
                      *95 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.04
                       EE--HHHHHHHHHHHHHHTT-GGG-EEEEEESS--SHHHHHHHHHTT-S....EEEEHHHHHHH..HHHHTTT.........S-........ CS
  Glu_syn_central  167 vpipslLavgavhhhLvrkglrtkvslvvesgearevhhfavllgyGad....avnPylaleti..eklveeg.........al........ 235 
                       + +p  L ++  h++Lv ++lr +v +v   g++r+  ++a+ + +Ga+    a +P +a+ ++  +    +          a         
       KHJ34609.1 1125 AGLPWELGLAETHQTLVLNDLRGRV-IVQTDGQLRTGRDVAIACLLGAEewgfATTPLIAMGCVfmR----KChlntcpvgiASqdpelrkk 1211
                       56777889999************98.77788*****************8777789999999999331....222333444330034333333 PP

                       ..----HH....HHHHHHHHHHHHHHHHHTT--BHH CS
  Glu_syn_central  236 ..aeeele....knyrkavekGllKimskmGistlq 265 
                              +     n+   + + l  im+k+G  t++
       KHJ34609.1 1212 fqG----TpehvINFFYYIANELRAIMAKLGFRTIN 1243
                       322....13345899999999999999999998875 PP

>> GXGXG  GXGXG motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  282.8   2.8   1.3e-87   1.1e-84       2     188 ..    1321    1507 ..    1320    1509 .. 0.98

  Alignments for each domain:
  == domain 1  score: 282.8 bits;  conditional E-value: 1.3e-87
                  EE-TT--STTHHHHHHHHHHHTTT---.-EEEEEEEEEE-TTTTTT--TTEEEEEEEEE-STTTTT-ESSEEEEE--TT-SS-GGGSB-S-SSTTTT CS
       GXGXG    2 eirnldrsvgtilsneiakrygeeglpedtikiklkGsaGqslgaflakGltleleGdandyvGkglsgGkivikpskeskfkaeeniivGnvvlyg 98  
                  +i n+dr++gt ls++++krygeeglp dti++++kGsaGqs+gafla G+tleleGdandyvGkglsgG+++i+p++++ fkaeen+++Gnv+lyg
  KHJ34609.1 1321 DIMNTDRAMGTSLSYQVSKRYGEEGLPIDTIHVNIKGSAGQSFGAFLAPGITLELEGDANDYVGKGLSGGRLIIYPPRAAIFKAEENMLIGNVCLYG 1417
                  689********************************************************************************************** PP

                  --SEEEEESSB--SSTTTT-SS-EEEESEB-SSTTTT-EEEEEEE-S-B-SSBTTT--EEEEEEE-SSSTHHHHB-TTT-EEEES-SHHH CS
       GXGXG   99 atgGklfirgkageRfavrnsgatavvegvgdhgceYmtGGvvvvLgktgrnfaaGmsgGiayvldedekfekklnkelvelekvedeee 188 
                  at+G++++rg a+eRfavrnsgatavvegvgdhgceYmtGG++ vLg+tgrnfaaGmsgGiay+ld +++f +kln+++ve++ +++++e
  KHJ34609.1 1418 ATSGTCYFRGIAAERFAVRNSGATAVVEGVGDHGCEYMTGGRILVLGSTGRNFAAGMSGGIAYILDINQDFVTKLNHDMVEISGLDNPSE 1507
                  **********************************************************************************99988776 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.6   0.1     6e-25   4.7e-22       2     280 ..    1757    2067 ..    1756    2081 .. 0.64

  Alignments for each domain:
  == domain 1  score: 78.6 bits;  conditional E-value: 6e-25
                   SEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHHHHHHCHHHHCCCCHCCTCEEEEESCEEEEETEEECTCEEE CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2    2 dvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcllskallgvaedaeiasevvkklnqgielllgeevvkidpgkkkvklekkkegdeek 97  
                    v++iG+GpAGla+a +l++ag+ vt++ ++   ++g  ll + + +++ d++i+++ ++ l ++ +++++    +i  g+ +++l k+k+     
   KHJ34609.1 1757 TVAIIGSGPAGLACADQLNKAGHLVTVY-ERSDRPGG--LLMYGIPNMKLDKKIVTRRTNLLAAEGIVFKT----GITVGE-DITLMKLKD----- 1839
                   69**************************.88888888..66689********9999665556666444444....566677.888866664..... PP

                   EEESEEEE---E.EE-BCTCTTC..............TTBEECCSECHHHHHHCCSS-T..............SEEEEES-SHHHHHHHHHHHHHT CS
                   xxxxxxxxxxxx.xxxxxxxxxx.............xxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   98 iaydklvlAtGs.sprdlgipGv.............aenvgklvrtldsaealklkllp..............krivvvGgGyiGvElAaalaklg 165 
                    + d++v+AtG+  +rdl+i+               a              +  l                  k+++v+GgG +G ++ ++  + g
   KHJ34609.1 1840 -ENDAVVIATGAtVARDLNIKNRslegihfameflhA------------NTKS-L---LdsgltdgayisakdKDVIVIGGGDTGNDCIGTSVRHG 1918
                   .56********8789999***8843333333333221............2221.1...12224567777777788****************99998 PP

                   -.............................EEEEEESSSSSSTTS-HHHHHHHHHHHHHTTEEEEESCEEEEEEETTE.....EEEEEETTSCE.. CS
                   x.............................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxx.. RF
  Pyr_redox_2  166 k.............................evtlveardrllraldkelsaaleealekeGvevklgtsvkeidgnge.....klevvledgee.. 225 
                   +                             +v + +a  +   ++d++    + +++ ++G   + g + ++++  ++     +++ v+++  e  
   KHJ34609.1 1919 AksvtnfellpqpksertrdnpwpqwprvyRVDYGHAEVKQHMGHDPREYCVMSQEFVDDGTGKVKGINTHRVEWTKSatggwDMTKVEGS--Ekf 2012
                   8444444444444444444444444442222222222222224445554455556666666555555555555555554453444444444..256 PP

                   EEESEEEE-S-EE.ES-HHCSHCCT-EEEETTEEE--TTS...BESSTTEEE-GGGCTE CS
                   xxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxx RF
  Pyr_redox_2  226 idadlvvvavGvr.pstelleeklglelderggivvdefl...rtnvpgiyaiGDvagg 280 
                   ++adlv+++ G+  p+ ++l  +++++  ++g+  ++  l    tnv+gi+a+GD+  g
   KHJ34609.1 2013 FPADLVLLSMGFLgPDARIL--DDKIT--KDGRSNIKTPLgkyHTNVEGIFAAGDCRRG 2067
                   ***********861555554..55565..566666666555568************933 PP

>> Fer4_20  Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.7   0.0   5.9e-24   4.6e-21       2     109 ..    1634    1740 ..    1633    1744 .. 0.93

  Alignments for each domain:
  == domain 1  score: 74.7 bits;  conditional E-value: 5.9e-24
                  TTS-S-SB----HHHHHHHHTT----TT-HHHH..CSTT---HHHHHHHHHTT-HHHHHHHHHHH-S-HHHHHHHS-GGGTGCCS-GGGTTB.---- CS
     Fer4_20    2 aknfkevalglteeealeeAsRClqCkkapcvk..gCPveidipefikkiaegnleeaakiiketnslpavcgrvCpqeelCegaCvlekkgkepva 96  
                  +++++e++++l+e+e + +A+RC++C  + c++  gCP+++ ip++ + + ++++++a++ +  tn++p+ +grvCp    CegaCvl+ ++ +pv 
  KHJ34609.1 1634 VRDWAELSQRLDEDELKYQAARCMDCGVPFCQSdtGCPISNIIPKWNELVFQDQWRDALNRLLMTNNFPEFTGRVCPAP--CEGACVLGINE-DPVG 1727
                  67899**************************96559*****************************************99..*******9777.9*** PP

                  HHHHHHHHHHHHH CS
     Fer4_20   97 igklerfvadaar 109 
                  i+++e  ++d   
  KHJ34609.1 1728 IKSIECAIIDRGF 1740
                  *****99999765 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   1.9e-10   1.5e-07       1      34 [.    1760    1793 ..    1760    1802 .. 0.96

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 1.9e-10
                     EE--SHHHHHHHHHHHCCTEEEEEE-SSSSSSGG CS
  NAD_binding_8    1 IvGaGlsGlvaAylLakagfdvlllekrdrlGGr 34  
                     I+G+G +Gl++A  L kag+ v+++e++dr+GG 
     KHJ34609.1 1760 IIGSGPAGLACADQLNKAGHLVTVYERSDRPGGL 1793
                     9*******************************95 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.1   8.5e-07   0.00066       2      33 ..    1758    1791 ..    1757    1793 .. 0.95
   2 !    7.5   0.0    0.0034       2.6     178     271 ..    1833    1918 ..    1806    1971 .. 0.69

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 8.5e-07
                  EEEECTSHHHHHHHHHHHHTT..EEEEESSSSTT CS
         DAO    2 vviiGGGiiGlstAyeLarrg..Vtllekgdiag 33  
                  v+iiG+G +Gl++A +L ++g  Vt++e++d++g
  KHJ34609.1 1758 VAIIGSGPAGLACADQLNKAGhlVTVYERSDRPG 1791
                  99***************99999********9999 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0034
                  CEEEEEEECTEEEEEEEEEEE--GGGHHHHHTTCTTTSEEEEEEEEEEEEEECCTHSTGSGCSEEEEEEEETTTTEEEEEETTSEEEEEESSE.... CS
         DAO  178 kvwgverttpgendaadavVnaaGawsdllgllkeldlpispvrgqvlvlkplseklvspaailpvpetdddgrgvyvtprkdgrvlvGgtad.... 270 
                   ++++       +d+ davV+a+Ga +  +   ++l+++ + + g +++++ l+       +   ++  +   +g y+ +  ++ +++Gg ++    
  KHJ34609.1 1833 TLMKL-------KDENDAVVIATGATV--A---RDLNIKNRSLEGIHFAMEFLHA------NTKSLL-DSGLTDGAYISAKDKDVIVIGGGDTgndc 1910
                  23334.......112399******995..6...667667799********55544......333344.77789999****98888888998866666 PP

                  .......E CS
         DAO  271 .......e 271 
                          
  KHJ34609.1 1911 igtsvrhG 1918
                  66555440 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   1.1e-06   0.00089       2      63 ..    1758    1828 ..    1757    1840 .. 0.77
   2 ?    6.6   0.0     0.015        12       2      35 ..    1898    1932 ..    1897    1939 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 1.1e-06
                  EEEECSSHHHHHHHHHHHHTTSEEEEEESSSSSS.........TTSSHHHHHHHHHHHHHTTEEEECSEEE CS
   Pyr_redox    2 vvvvGgGyiglElAgalaelgkkVtvversdkll.........rllDeeaskilqeklekngievllntkv 63  
                  v+++G+G  gl +A  l++ g+ Vtv ersd++           +lD+++ ++ ++ l ++gi + ++ +v
  KHJ34609.1 1758 VAIIGSGPAGLACADQLNKAGHLVTVYERSDRPGgllmygipnMKLDKKIVTRRTNLLAAEGIVFKTGITV 1828
                  89******************************874322333233467777777777777777777776655 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.015
                  EEEECSSHHHHHHHHHHHHTT.SEEEEEESSSSSS CS
   Pyr_redox    2 vvvvGgGyiglElAgalaelg.kkVtvversdkll 35  
                  v+v+GgG++g ++ g+  ++g k+Vt +e  +++ 
  KHJ34609.1 1898 VIVIGGGDTGNDCIGTSVRHGaKSVTNFELLPQPK 1932
                  89***************999967999999888876 PP

>> Amino_oxidase  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   0.0   2.4e-08   1.9e-05       2      29 ..    1766    1793 ..    1765    1796 .. 0.95

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 2.4e-08
                     HHHHHHHHHHHTTEEEEEEESSSSSBTT CS
  Amino_oxidase    2 aGLaaArqLlsaGfdVtvlEardrvGGR 29  
                     aGLa+A qL  aG+ Vtv+E +dr+GG 
     KHJ34609.1 1766 AGLACADQLNKAGHLVTVYERSDRPGGL 1793
                     9**************************6 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   4.4e-05     0.034       2      30 ..    1760    1787 ..    1759    1809 .. 0.89
   2 ?    4.0   0.0     0.031        24     162     189 ..    1893    1920 ..    1880    1937 .. 0.88
   3 ?    2.8   0.0     0.072        56     225     305 .]    1981    2062 ..    1964    2062 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.4e-05
  Pyr_redox_3    2 IiGaGPaGlaaaielkkagledylilEkg 30  
                   IiG GPaGla+a +l+kag   +++ E+ 
   KHJ34609.1 1760 IIGSGPAGLACADQLNKAGH-LVTVYERS 1787
                   9******************9.58888875 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.031
  Pyr_redox_3  162 yagqkvvViGgknSavDaAlelvrkgae 189 
                    ++++v+ViGg++++ D     vr+ga+
   KHJ34609.1 1893 AKDKDVIVIGGGDTGNDCIGTSVRHGAK 1920
                   5799*************99999999875 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.072
  Pyr_redox_3  225 ekikvlfnaevkeikekeeeykvktedgkkvevkddvvla.tGyk.pdlsflkkslfeldedgrpvlteeteetnvpglflaG 305 
                   +k+k + +++v+  k  +  +++++ +g++     d vl+ +G+  pd+++l+  ++++d  + ++    +  tnv+g+f aG
   KHJ34609.1 1981 GKVKGINTHRVEWTKSATGGWDMTKVEGSEKFFPADLVLLsMGFLgPDARILD-DKITKDGRSNIKTPLGKYHTNVEGIFAAG 2062
                   567777778888888888888888888877777777777779**637888998.666666777777777999*********99 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   1.5e-07   0.00012       2      36 ..    1757    1791 ..    1756    1797 .. 0.93
   2 ?   -2.2   0.1       1.6   1.3e+03       2      15 ..    1897    1910 ..    1896    1924 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 1.5e-07
                   SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS- CS
  HI0933_like    2 dviviGgGaAGlmaAisaakrgkrVlllekakklg 36  
                   +v++iG G+AGl +A +++k+g+ V+++e+ +++g
   KHJ34609.1 1757 TVAIIGSGPAGLACADQLNKAGHLVTVYERSDRPG 1791
                   69****************************99988 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.6
                   SEEEE--SHHHHHH CS
  HI0933_like    2 dviviGgGaAGlma 15  
                   dviviGgG  G  +
   KHJ34609.1 1897 DVIVIGGGDTGNDC 1910
                   8*******999655 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   7.9e-06    0.0062       2      34 ..    1758    1790 ..    1757    1798 .. 0.90
   2 ?   -1.4   0.0       1.2   9.2e+02     386     410 ..    2049    2076 ..    2038    2080 .. 0.74

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 7.9e-06
                     EEEE--SHHHHHHHHHHHHTTT-EEEEESSSGG CS
  FAD_binding_2    2 viViGsGlAGLaAAleaaeaGlkvavvekeqef 34  
                     v +iGsG AGLa+A ++++aG+ v+v e  ++ 
     KHJ34609.1 1758 VAIIGSGPAGLACADQLNKAGHLVTVYERSDRP 1790
                     89************************9988765 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.2
                     TTEEESSBTEEE-STCE...ESSSSTTS CS
  FAD_binding_2  386 dadgqpipGLYAaGeva...aggvhgan 410 
                     ++  ++++G +AaG +    + +v g+n
     KHJ34609.1 2049 GKYHTNVEGIFAAGDCRrgqSLIVWGIN 2076
                     566789**********955444555555 PP

>> NAD_Gly3P_dh_N  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0     6e-06    0.0047       2      82 ..    1758    1853 ..    1757    1863 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 6e-06
                      EEEE--SHHHHHHHHHHHTTT--EEEE-S-H.............HHHHHHHHHSSBTTTBTT----TTEEEES-HH..HHHTT--EEEE---H CS
  NAD_Gly3P_dh_N    2 iavlGaGswGtalAkvlaenghevrlwvree.............elieeineehenvkyLpgiklpenlvattdla..ealkgadiivlvvPs 79  
                      +a++G+G  G a A  l+++gh v+++ r++             +l ++i ++++n    +gi + + +++ +d++  +  ++ d +v++   
      KHJ34609.1 1758 VAIIGSGPAGLACADQLNKAGHLVTVYERSDrpggllmygipnmKLDKKIVTRRTNLLAAEGIVFKTGITVGEDITlmKLKDENDAVVIATGA 1850
                      9*****************************9*************9**************************9997622556777888888766 PP

                      HHH CS
  NAD_Gly3P_dh_N   80 qal 82  
                       + 
      KHJ34609.1 1851 TVA 1853
                      655 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.45   3.5e+02      99     139 ..     785     831 ..     770     842 .. 0.74
   2 !   15.0   0.1   1.4e-05     0.011      20      73 ..    1758    1812 ..    1754    1860 .. 0.79
   3 ?   -1.9   0.3       2.1   1.6e+03      16      30 ..    1894    1908 ..    1886    1914 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.45
                 HHHHH.HHHHHTSTTEEEEESEEEEEEEEET.....BTEEEEEEEEE CS
        Thi4  99 ftstl.lskvlqlanvkllnavaveDlivre.....gegvaGvvinw 139
                 ++s++ +s +    ++++++a+ ++D +v        ++++Gv  + 
  KHJ34609.1 785 VMSKMgISTLASYKGAQIFEALGIDDTVVNRcfkgtATRIKGVTFDL 831
                 5666623444556899***********99887875448999997765 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 1.4e-05
                  EEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--TTTTTT..STTBSEEEEETTT CS
        Thi4   20 vvivGaGssGLtaayylakkpdlkvailersvspGGGawlG..Gqlfsaivvrkpa 73  
                  v+i+G+G++GL++a  l k+ +  v++ ers  pGG    G   +  ++ +v + +
  KHJ34609.1 1758 VAIIGSGPAGLACADQLNKA-GHLVTVYERSDRPGGLLMYGipNMKLDKKIVTRRT 1812
                  89******************.888***********987766334555555555544 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 2.1
                  TEEEEEEE--SHHHH CS
        Thi4   16 aesDvvivGaGssGL 30  
                   + Dv+++G+G +G 
  KHJ34609.1 1894 KDKDVIVIGGGDTGN 1908
                  578********9995 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.0   2.2e-05     0.017       3      34 ..    1757    1788 ..    1756    1791 .. 0.91

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 2.2e-05
                     EEEEE--SHHHHHHHHHHHHTTHHEEEEESSS CS
  FAD_binding_3    3 dVlIVGaGpaGlmlallLseaGvrvvlvekrs 34  
                     +V+I+G+GpaGl  a  L +aG  v++ e+ +
     KHJ34609.1 1757 TVAIIGSGPAGLACADQLNKAGHLVTVYERSD 1788
                     699*******************9999999865 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   1.6e-05     0.013       2      46 ..    1758    1802 ..    1757    1823 .. 0.86
   2 ?   -3.8   0.9       7.5   5.9e+03       1      24 [.    1897    1920 ..    1897    1922 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.6e-05
  FAD_oxidored    2 vvVvGGgpaGvaAAiaAaraGakvlLveergvlGGlltsglvatd 46  
                    v ++G+gpaG+a+A +  +aG  v + e++++ GGll  g+ ++ 
    KHJ34609.1 1758 VAIIGSGPAGLACADQLNKAGHLVTVYERSDRPGGLLMYGIPNMK 1802
                    89**********************************998886554 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 7.5
  FAD_oxidored    1 DvvVvGGgpaGvaAAiaAaraGak 24  
                    Dv+V+GGg  G  +  ++ r+Gak
    KHJ34609.1 1897 DVIVIGGGDTGNDCIGTSVRHGAK 1920
                    9*******9997776666666666 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.35   2.7e+02     184     206 ..    1537    1559 ..    1523    1569 .. 0.81
   2 ?    9.7   0.1    0.0005      0.39       2      35 ..    1758    1789 ..    1757    1792 .. 0.88
   3 ?   -3.1   0.0       3.9   3.1e+03       1      12 [.    1897    1908 ..    1897    1946 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.35
  Lycopene_cycl  184 kgltFlYalPldsdrllvEeTel 206 
                       ++F+ +lP+d +r++ Ee   
     KHJ34609.1 1537 ALPRFVKVLPIDYKRVIAEEAAK 1559
                     458****************9765 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0005
  Lycopene_cycl    2 vvviGaGpAglslAarlteakpglkvvlieasps 35  
                     v++iG+GpAgl+ A +l  +k+g  v++ e s+ 
     KHJ34609.1 1758 VAIIGSGPAGLACADQL--NKAGHLVTVYERSDR 1789
                     89***************..999988888887765 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 3.9
  Lycopene_cycl    1 DvvviGaGpAgl 12  
                     Dv+viG+G  g 
     KHJ34609.1 1897 DVIVIGGGDTGN 1908
                     9*******9885 PP

>> NAD_binding_7  Putative NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.1    0.0062       4.8       6      39 ..    1754    1787 ..    1753    1857 .. 0.79
   2 ?    4.3   0.0     0.072        56       3      32 ..    1891    1920 ..    1889    1930 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0062
  NAD_binding_7    6 kgkkvlvvGgGevAarkvrklleagakvtvvape 39  
                     +gk+v ++G G+ ++  + +l +ag  vtv+   
     KHJ34609.1 1754 TGKTVAIIGSGPAGLACADQLNKAGHLVTVYERS 1787
                     689***************************8766 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.072
  NAD_binding_7    3 ldlkgkkvlvvGgGevAarkvrklleagak 32  
                     +  k+k v+v+GgG+ +   + + ++ gak
     KHJ34609.1 1891 ISAKDKDVIVIGGGDTGNDCIGTSVRHGAK 1920
                     6789************99988888888876 PP

>> FMN_dh  FMN-dependent dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.7   0.00025      0.19     234     303 ..    1098    1180 ..    1092    1187 .. 0.65
   2 ?   -2.8   0.0       3.1   2.4e+03     321     341 ..    1225    1245 ..    1217    1248 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00025
                  HHTTESEEEE--GGGTSSTT---HHHCH.............HHHHHHH..SS-EEEESS--SHHHHHHHHHTT-SEEEESHHH CS
      FMN_dh  234 veaGvdgivvSNHGGRqldgapatidvL.............peiveavggrievlvDgGirrGsDvlkAlalGAdavllGRpf 303 
                  ++a +d i++S H G    +  + i+                 + + ++gr+ v  Dg  r+G Dv+ A  lGA+  +++   
  KHJ34609.1 1098 AKAKADHILISGHDGGTGASRWTGIKYAglpwelglaethqTLVLNDLRGRVIVQTDGQLRTGRDVAIACLLGAEEWGFATTP 1180
                  56777788888887744444444444333333333322222223566789************************977666555 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 3.1
                  HHHHHHHHHHHHHT-SBHHHH CS
      FMN_dh  321 ilraelertmallGvksvael 341 
                   + +el++ ma lG+++++e+
  KHJ34609.1 1225 YIANELRAIMAKLGFRTINEM 1245
                  6789*************9986 PP

>> AdoHcyase_NAD  S-adenosyl-L-homocysteine hydrolase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.1    0.0069       5.3      22      53 ..    1754    1785 ..    1750    1850 .. 0.94
   2 ?    2.9   0.1      0.14   1.1e+02       7      49 ..    1878    1921 ..    1873    1929 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0069
                     TTSEEEEE--SHHHHHHHHHHHHCT-EEEEE- CS
  AdoHcyase_NAD   22 aGkvavvaGyGdvGkGcaaslkglGarvivte 53  
                     +Gk++ ++G G  G  ca+ l+++G  v+v e
     KHJ34609.1 1754 TGKTVAIIGSGPAGLACADQLNKAGHLVTVYE 1785
                     7***************************9987 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.14
                     CCCCH.HHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHCT-EE CS
  AdoHcyase_NAD    7 eslvd.gikratdvllaGkvavvaGyGdvGkGcaaslkglGarv 49  
                     +sl+d g+  ++ +    k ++v+G Gd G  c  +   +Ga+ 
     KHJ34609.1 1878 KSLLDsGLTDGAYISAKDKDVIVIGGGDTGNDCIGTSVRHGAKS 1921
                     6777746888888888899**************88777777764 PP

>> 2-Hacid_dh_C  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00058      0.45      35      71 ..    1754    1790 ..    1744    1808 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00058
                    TTSEEEEES-SHHHHHHHHHHHHTT-EEEEESSSHHH CS
  2-Hacid_dh_C   35 sgktvGiiGlGrIGqavakrlkafgmkviaydrskkk 71  
                    +gktv+iiG G  G a a+ l++ g  v++y+rs ++
    KHJ34609.1 1754 TGKTVAIIGSGPAGLACADQLNKAGHLVTVYERSDRP 1790
                    69*******************************9876 PP

>> Rossmann-like  Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.2      0.11        82       7      37 ..    1076    1107 ..    1071    1119 .. 0.82
   2 ?   -1.9   0.0       3.6   2.8e+03      36      64 ..    1552    1580 ..    1548    1594 .. 0.78
   3 ?    6.0   0.0     0.013       9.8       8      43 ..    1753    1787 ..    1746    1817 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.11
  Rossmann-like    7 rsarlsvGiisaGrvGt.algaaleraghvvv 37  
                      +ar+sv ++s   vG+ a g+a ++a+h+++
     KHJ34609.1 1076 PRARISVKLVSETGVGVvASGVAKAKADHILI 1107
                     579*************725799*******865 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 3.6
  Rossmann-like   36 vvgisaisaasreraerrlPdvpvleved 64  
                     v++  a  aa  +ra   +P+ p +++++
     KHJ34609.1 1552 VIAEEAAKAAEAKRAAFEMPNLPGIQLRE 1580
                     67778889999999999999999888765 PP

  == domain 3  score: 6.0 bits;  conditional E-value: 0.013
  Rossmann-like    8 sarlsvGiisaGrvGtalgaaleraghvvvgisais 43  
                     ++  +v ii++G  G a +  l++agh v+ ++  s
     KHJ34609.1 1753 RTGKTVAIIGSGPAGLACADQLNKAGHLVT-VYERS 1787
                     444579*********************986.45555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       571  (0.0318478); expected 358.6 (0.02)
Passed bias filter:                      551  (0.0307323); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              23  [number of targets reported over threshold]
# CPU time: 1.21u 0.27s 00:00:01.48 Elapsed: 00:00:00.53
# Mc/sec: 11973.87
//
Query:       KHJ34610.1  [L=380]
Description: putative galactose-1-phosphate uridylyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.5e-64  216.3   0.1    4.7e-63  213.0   0.1    2.2  2  GalP_UDP_transf  Galactose-1-phosphate uridyl transferase, N-
    6.1e-56  188.7   0.0    1.3e-55  187.6   0.0    1.5  1  GalP_UDP_tr_C    Galactose-1-phosphate uridyl transferase, C-
  ------ inclusion threshold ------
       0.09   13.2   0.0        4.7    7.7   0.1    2.4  2  DASH_Dad2        DASH complex subunit Dad2
        0.1   13.3   0.0       0.36   11.6   0.0    1.9  2  HIT              HIT domain


Domain annotation for each model (and alignments):
>> GalP_UDP_transf  Galactose-1-phosphate uridyl transferase, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.0   0.1     1e-66   4.7e-63       6     184 .]       7     200 ..       2     200 .. 0.92
   2 ?    0.9   0.0      0.12   5.3e+02       4      42 ..     279     317 ..     257     325 .. 0.83

  Alignments for each domain:
  == domain 1  score: 213.0 bits;  conditional E-value: 1e-66
  GalP_UDP_transf   6 ddaiyashrrfnpltgewvlvsphrtkrpwqgqqekiskdtlpekDklkcyLcPgnsrangefnpkykstfvftndFpalsedsnyikteai.. 97 
                      +d+   shrr+npl+g+w lvsphrtkrpwqgqqe++s + lp++D   cyLcPgn+ra+g+ np+y++tf f nd++a++e++ ++k  +   
       KHJ34610.1   7 NDI---SHRRYNPLRGSWLLVSPHRTKRPWQGQQEAPSVNLLPDYD-SLCYLCPGNKRAQGDINPNYTGTFLFVNDYSAVKEKQAEYKMISDlr 96 
                      455...9***************************************.9**************************************99955555 PP

  GalP_UDP_transf  98 .aknilfkaepayGrceviifsskheltladlspkdikavvaaWqektae.lka................keypkcvlifENkGaamgvsnphP 173
                       ++++l++ae+++G+c v+ fs+ h++tladl+ ++i ++v +W++ +   l +                + ++++++ifENkGaamg+snphP
       KHJ34610.1  97 dSSSQLLRAESVTGKCIVLAFSPFHNKTLADLTSEQILPIVHEWTQIYIRhL-DptsplaqcklqdhkncTVQYRWMQIFENKGAAMGCSNPHP 189
                      45559*******************************************9952.246666668899999999*********************** PP

  GalP_UDP_transf 174 Hgqiwaeehlp 184
                      Hgqiw +++lp
       KHJ34610.1 190 HGQIWITSTLP 200
                      *******9998 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.12
  GalP_UDP_transf   4 eeddaiyashrrfnpltgewvlvsphrtkrpwqgqqeki 42 
                      e+ +ai    rr+++l++++   s+ + + p+ g +e +
       KHJ34610.1 279 EFAEAIAEVTRRYDNLFETSFPYSSGIHQAPLTGTEEDM 317
                      556666778899999999999999999999999998877 PP

>> GalP_UDP_tr_C  Galactose-1-phosphate uridyl transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  187.6   0.0   2.9e-59   1.3e-55       2     157 ..     207     365 ..     206     377 .. 0.94

  Alignments for each domain:
  == domain 1  score: 187.6 bits;  conditional E-value: 2.9e-59
                    HHHHHHHHHHH.SS-HHHHHHHHHHHH-TTEEEE-SSEEEE--TT--STT-EEEEESS--SSGGG--HHHHHHHHHHHHHHHHHHHHHCTS---EE CS
  GalP_UDP_tr_C   2 ldsfekYfagsngsillhdyvqmelaekervvelkdsflavvpylakWPfevlllrkaevkslaeladeekedlaailkklarkydnlfetsfeys 97 
                    l + ++Y  +++g ++l+dyv +e+++ erv+ ++dsfl++ p++a+WPfev+++ k++++ l++l+++ek + a ++ +++r+ydnlfetsf+ys
     KHJ34610.1 207 LAQLKRYRVENKGRNMLVDYVDLEVKKGERVIFQNDSFLVLCPWWATWPFEVMIIAKQHKRALVDLNNIEKLEFAEAIAEVTRRYDNLFETSFPYS 302
                    567899****************************************************************************************** PP

                    EEEE---SCCCTT...TT--EEEEE--BCSSTTEB----THHHHT-EEESS-HHHHHHHHH.C CS
  GalP_UDP_tr_C  98 mGlhqaplnaeed...nswlHaHfevpllrsatvrkieVGlelLperlrdllaEqaaerlrna 157
                     G+hqapl+++e+    s lH+Hf++pllrs tv+k++VG+el++e++rd+++Eqaa+rlr++
     KHJ34610.1 303 SGIHQAPLTGTEEdmaCSHLHMHFYPPLLRSSTVKKFLVGYELMAEPQRDITPEQAAKRLRDD 365
                    **********999664445*****************************************954 PP

>> DASH_Dad2  DASH complex subunit Dad2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.1     0.001       4.7       3      25 ..      81     103 ..      79     108 .. 0.90
   2 ?    2.7   0.0     0.037   1.6e+02      42      69 ..     281     308 ..     270     327 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.001
   DASH_Dad2   3 riaeKraELeaLkqlrdlsdsla 25 
                  ++eK+aE++ +  lrd s++l 
  KHJ34610.1  81 AVKEKQAEYKMISDLRDSSSQLL 103
                 689****************9985 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.037
   DASH_Dad2  42 teavasVlanWqnvlraismaslkllqk 69 
                 +ea+a+V + ++n +++   +s++++q 
  KHJ34610.1 281 AEAIAEVTRRYDNLFETSFPYSSGIHQA 308
                 79*************9877777777654 PP

>> HIT  HIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.6   1.2e+04      20      53 ..      64      97 ..      61     114 .. 0.60
   2 ?   11.6   0.0   7.9e-05      0.36       6      92 ..     235     326 ..     230     329 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.6
                -SS-SSSSEEEEEESSTGCSGGGCCHHHHHHHHH CS
         HIT 20 didpkapghlLvipkkhlselhdlteeelaklls 53
                di+p + g +L +    + + ++++ + +++l+ 
  KHJ34610.1 64 DINPNYTGTFLFVNDYSAVKEKQAEYKMISDLRD 97
                6666666666666666555555555555555554 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 7.9e-05
                 CCEEEE-SSEEEEE-SS-SSSSEEEEEESSTGCSGGGCCHHHHHHHHHHHHHHHHHHHTCT.....TCCCEEEEEEESGGGT-SSSS-EEEE CS
         HIT   6 stvvyeddlvlafldidpkapghlLvipkkhlselhdlteeelakllsavkkvakalqkkf.....knkglrvvinngahagqsvahlHiHv 92 
                 ++v++++d +l++    +++p  + +i k+h + l dl++ e  ++ +a+ +v +   + f       +g++ +  +g +      hlH+H 
  KHJ34610.1 235 ERVIFQNDSFLVLCPWWATWPFEVMIIAKQHKRALVDLNNIEKLEFAEAIAEVTRRYDNLFetsfpYSSGIHQAPLTGTEEDMACSHLHMHF 326
                 6799999************************99999999999999999999999998888877788668999999999999999*******6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 2879.33
//
Query:       KHJ34611.1  [L=372]
Description: putative pth11-like integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.16   12.1   0.8       0.47   10.6   0.1    2.0  2  GPHR_N     The Golgi pH Regulator (GPHR) Family N-terminal


Domain annotation for each model (and alignments):
>> GPHR_N  The Golgi pH Regulator (GPHR) Family N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   2.6e-05      0.47      14      43 ..     204     233 ..     201     246 .. 0.84
   2 ?   -1.4   0.1      0.15   2.7e+03      44      67 ..     312     335 ..     280     335 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 2.6e-05
      GPHR_N  14 iGvtlmAiLSGfGavstpyetfslfkrpvt 43 
                 +G++l+ +L Gf+a+ + +  +slf  +++
  KHJ34611.1 204 VGICLILSLGGFAAIVSIWRLYSLFIVSIS 233
                 79*********************9965555 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.15
      GPHR_N  44 eadinslearlehtrellaekrke 67 
                 e++i ++++ + +++++l+ k+k+
  KHJ34611.1 312 ENHIDRSKNLQGTSNDDLECKEKQ 335
                 789999999999999999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       816  (0.0455129); expected 358.6 (0.02)
Passed bias filter:                      347  (0.0193541); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2698.27
//
Query:       KHJ34612.1  [L=555]
Description: putative quinate transport protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-113  380.5  28.6   1.3e-113  380.3  28.6    1.0  1  Sugar_tr  Sugar (and other) transporter
      9e-19   67.6  26.4      9e-19   67.6  26.4    1.9  2  MFS_1     Major Facilitator Superfamily
  ------ inclusion threshold ------
       0.12   11.6   0.7       0.19   10.9   0.7    1.2  1  TIP49     TIP49 P-loop domain


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  380.3  28.6  2.2e-117  1.3e-113       1     452 []      24     492 ..      24     492 .. 0.93

  Alignments for each domain:
  == domain 1  score: 380.3 bits;  conditional E-value: 2.2e-117
                 HHHHHHHHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH....HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTT CS
    Sugar_tr   1 valvaalggllfgYdtgvigafltllkfaknfglsksksskee.ssvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakg 98 
                 v+++a++gg+lfg+dtg+ig++lt+ +f++ f l +++ ++++  s  sg ivs++++G+++G++ +++l++  GRk++l+ ++++f+ g+ lqa++  
  KHJ34612.1  24 VTILASFGGMLFGWDTGLIGGVLTMESFQRSFALRNTTPEEQKnFSFISGNIVSVLQAGCFFGAMSSYYLSHHHGRKSALMQGTLIFLLGSTLQACSGI 122
                 6899*****************************99988655545899**************************************************97 PP

                 T.SS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHH.HTSS-..TTHHHHHHHCCHHHHHHHHHHGGGS-- CS
    Sugar_tr  99 k.nsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglgl.nktsn..adgwrillglqlvpallllilllflPE 193
                 + +s+ +l++gR++ G+gvG++s++vP+yi+E++ k++Rg++++  ql+   Gi++++++++g+ +   +  + +wri+++lq++p ++ll++l++  E
  KHJ34612.1 123 NtTSLTLLYIGRIVGGLGVGIISAVVPTYIGENTSKDIRGRCIGTMQLFNCSGIMISFFVNYGIiSSAVAgtSLEWRIPFALQMIPGIFLLVGLVTQYE 221
                 779*************************************************************555555999************************** PP

                 -HHHHHHTT-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH..........HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-T CS
    Sugar_tr 194 SPrylvekgkeeeakevlaklrgeedadrelaeekdsleaeqeee.....kaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlgls 287
                 +Pr+l++k++e eak vl+ l g+  ++ +l +e+++++     +     ++++ +  +++++++r+++g+ l+++qq tG n+i yy+p+if+++gl+
  KHJ34612.1 222 TPRWLIMKRRETEAKVVLRHLSGKIIDEARLLQEFNEINIDLHGRedlslSQQVISACENRKILYRVTLGAILMFWQQWTGTNSINYYAPQIFSSIGLK 320
                 ********************999966666666666666655554455558888888888888************************************* PP

                 HH...HHHHHHHHHHHHHHHHHH.HHHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS.......CHHHHHHHHHHHHHHHTTTTHHHHHHHHHH CS
    Sugar_tr 288 ks...llvtiivgvvnfvatfva.iflvdrfGRRtllllGaagmaicfvilgivalllvaks....kaasivaivfialfialfalgwgpvpwvlvsEl 378
                 ++   ll+t+++gvv++++ ++a +  ++++GR++ l++++ag+a+c++++gi   + +++     +a +i a+++++lf+ +f+lgwg vp+vl++E+
  KHJ34612.1 321 DQktqLLATGMYGVVKAIMAMMAlLIAIEQIGRKYSLMISSAGQAFCMLYIGIQNKMASNTPisslSASGIFAVICVYLFVLFFSLGWGLVPYVLSAEV 419
                 ***********************7799*************************77777777767789999****************************** PP

                 SHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGGT CS
    Sugar_tr 379 fpqsvRskalaiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrtleeieelf 452
                 +p+++Rs+ +a++ +++w+ nf+i+ l pi++++ig +++f++f+ + vl ++f +++vpet+g++le ++ lf
  KHJ34612.1 420 SPNHLRSLSMALSLMMQWINNFIIARLVPIMLNRIG-FGTFIFFGNCSVLCFLFAMICVPETAGVPLERVHLLF 492
                 ************************************.*******************************998765 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.6  26.4   1.5e-22     9e-19       2     345 ..      29     435 ..      28     444 .. 0.77
   2 !    5.8  21.6   0.00096       5.7       3     175 ..     290     480 ..     288     498 .. 0.76

  Alignments for each domain:
  == domain 1  score: 67.6 bits;  conditional E-value: 1.5e-22
       MFS_1   2 llaaflsalarsilgpalpl.alaedlgispse..........igllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa...sslw 86 
                 +++++l +++ +++g +l++   ++++ +  ++           g ++++  +g++++++   +ls  +Gr++ l+ g l+f+lg++l + +   +++ 
  KHJ34612.1  29 SFGGMLFGWDTGLIGGVLTMeSFQRSFALRNTTpeeqknfsfiSGNIVSVLQAGCFFGAMSSYYLSHHHGRKSALMQGTLIFLLGSTLQACSginTTSL 127
                 68999**************8888888885555555566644444559999999********************************44444235664555 PP

       MFS_1  87 .lllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg......Wravfyilaivsllafvlfllllpeeppe 178
                  ll+++r++ Glg g++ +++ ++i + ++k+ rgr ig +++++  G+++   +   ++ss+       Wr +f +  i +++++v    l+++ +++
  KHJ34612.1 128 tLLYIGRIVGGLGVGIISAVVPTYIGENTSKDIRGRCIGTMQLFNCSGIMISFFVNYGIISSAVagtsleWRIPFALQMIPGIFLLV---GLVTQYETP 223
                 5**************************************************9988886664444478888***************88...777777777 PP

       MFS_1 179 rkrkspkeee......................................kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevlg 239
                 r+   +++e                                       ++++ +++ +  +++l +  l  +++++   ++g++++ ++ p +  +  g
  KHJ34612.1 224 RWLIMKRRETeakvvlrhlsgkiidearllqefneinidlhgredlslSQQVISACEN--RKILYRVTL-GAILMFWQQWTGTNSINYYAPQI-FSSIG 318
                 7777666666779999999999999999999999999988666666666666666666..444444423.477777777888888*******7.9**** PP

       MFS_1 240 ls...glllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavt.........ssavllllvlvl.iGfglgfvfpsllala 325
                 l+   + lla+++++++ +++a++all++     +gr+  l+++ ++ +++ l + + +           s + ++++++v  + +++++ ++++ +++
  KHJ34612.1 319 LKdqkTQLLATGMYGVVKAIMAMMALLIAI--EQIGRKYSLMISSAGQAFCMLYIGIQNKMasntpisslSASGIFAVICVYlFVLFFSLGWGLVPYVL 415
                 *****66999999*******9999666555..8899877777777777777777776666698777775433333333444425558888899999999 PP

       MFS_1 326 sdlappeeagtasglfntag 345
                 s  ++p++  ++s + +++ 
  KHJ34612.1 416 SAEVSPNHLRSLSMALSLMM 435
                 99997777766666666443 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.00096
       MFS_1   3 laaflsalarsi....lgpalplalaedlgispseigllltl.yalgaavaslpl.GrlsdrfGrrrvlllglllfalglllll....fass....... 84 
                 l+a+l++++ ++    ++  +p  + ++ g+  +  +ll+t+ y+++ a++++ +    ++ +Gr+  l+++ ++ a+++l++     +as+       
  KHJ34612.1 290 LGAILMFWQQWTgtnsINYYAP-QIFSSIGLKDQKTQLLATGmYGVVKAIMAMMAlLIAIEQIGRKYSLMISSAGQAFCMLYIGiqnkMASNtpissls 387
                 5666666666666655888888.677888999999999777779999999999995666788*****************66666355544223344444 PP

       MFS_1  85 ...lw.l....llvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpee 175
                    ++ +    l+vl +  G+g      + ++l a+++p   r++ ++l  ++  +   + + l ++++  +g+ ++f++++  s+l+f+++++ +pe+
  KHJ34612.1 388 asgIFaVicvyLFVLFFSLGWGL-----VPYVLSAEVSPNHLRSLSMALSLMMQWINNFIIARLVPIMLNRIGF-GTFIFFGNCSVLCFLFAMICVPET 480
                 44444332333666666666664.....778999999999******************999999999999***9.89**********999877777665 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.7   3.1e-05      0.19      10      90 ..     316     393 ..     311     398 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 3.1e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  10 gLGldedgeaekeeeglvGqkkareaagvivelikekklaGravLlaGpsgtGktalaiaiskelgedvpfvalsgsevys 90 
                 ++Gl+++ +++  + g+ G +ka  a+  +  li  ++++ +  L+   +g     l i+i +++++++p  +ls+s +++
  KHJ34612.1 316 SIGLKDQ-KTQLLATGMYGVVKAIMAM--MALLIAIEQIGRKYSLMISSAGQAFCMLYIGIQNKMASNTPISSLSASGIFA 393
                 6788877.6777889******998776..555788899999**************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       656  (0.0365888); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3822.75
//
Query:       KHJ34613.1  [L=138]
Description: hypothetical protein EV44_g3470 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
       0.17   12.6   1.2       0.57   10.9   1.2    2.0  1  RNA_polI_A14  Yeast RNA polymerase I subunit RPA14


Domain annotation for each model (and alignments):
>> RNA_polI_A14  Yeast RNA polymerase I subunit RPA14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   1.2   3.2e-05      0.57       7      34 ..       8      35 ..       6     101 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 3.2e-05
  RNA_polI_A14  7 vkssqhvskeevekfLteFIdekEssas 34
                   +s+q+v++++vek L+++I e E + +
    KHJ34613.1  8 YTSNQNVTEDDVEKRLDQYILEIEGVDQ 35
                  5678****************99887333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (138 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       783  (0.0436723); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1080.52
//
Query:       KHJ34614.1  [L=173]
Description: hypothetical protein EV44_g4041 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       346  (0.0192983); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1278.76
//
Query:       KHJ34615.1  [L=351]
Description: hypothetical protein EV44_g6297 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0018   17.6   0.7      0.013   14.7   0.0    2.0  2  DUF2046   Uncharacterized conserved protein H4 (DUF2046)


Domain annotation for each model (and alignments):
>> DUF2046  Uncharacterized conserved protein H4 (DUF2046)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   7.3e-07     0.013     166     194 ..      99     127 ..      95     145 .. 0.87
   2 ?    0.8   0.4     0.013   2.4e+02      96     157 ..     276     339 ..     259     347 .. 0.63

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 7.3e-07
     DUF2046 166 kvelentleqeqealvnrlWkrldkleae 194
                  v+l  +le+eqea+vnrl + l  l a 
  KHJ34615.1  99 AVDLYAQLEKEQEAVVNRLTRELSLLRAA 127
                 699****************9999888765 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.013
     DUF2046  96 tlalnyeqeeefltndlsrklsqlrqekvele.qtlekeqevqvnklmr.kiekleaevlakqt 157
                 +l ++y    +++t  +  k  +l++   +++ + le e+  + n+++r ++ +le+   +k++
  KHJ34615.1 276 ALQRDYTSRSQCMTGSVGEKEVHLHNRFEDVAmHRLELENAKKENEILRlRVRELETLLIQKKQ 339
                 5666666667777777776666665433333213466666666666666566666666655555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       683  (0.0380947); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2552.71
//
Query:       KHJ34616.1  [L=450]
Description: putative camp-dependent protein kinase regulatory subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.1e-41  138.4   0.0      3e-21   75.3   0.0    2.3  2  cNMP_binding  Cyclic nucleotide-binding domain
    6.6e-08   32.1   0.0    1.5e-07   30.9   0.0    1.6  1  RIIa          Regulatory subunit of type II PKA R-subunit


Domain annotation for each model (and alignments):
>> cNMP_binding  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.8   0.0   1.1e-20     1e-16      10      88 ..     222     308 ..     218     309 .. 0.94
   2 !   75.3   0.0   3.3e-25     3e-21       2      86 ..     345     426 ..     344     427 .. 0.94

  Alignments for each domain:
  == domain 1  score: 60.8 bits;  conditional E-value: 1.1e-20
                   EE-TTSB-SEEEEEEES-EEEE.......EEETTS.EEEEEEE-TTEEESHHHHHHTS--SSEEEESST.EEEEEEEHHHHHHHHHH CS
  cNMP_binding  10 ifrqGdpadslyivlsGevrvy.......rlsedgkevvlavlgpGdlfGelalltgeprtatvvAltd.sellalprddflellqq 88 
                   ++ qGd++d++y+v+ G++ vy       +  +dg  + +a++ pG  fGelal++++pr+atv++ +  ++l+al+r +f+++l++
    KHJ34616.1 222 VISQGDQGDYFYVVENGKFDVYvnstgsiQPGPDGLGNKVATIEPGGSFGELALMYNAPRAATVISAESaCTLWALDRITFRRILMD 308
                   899*******************9999999999999999*************************9999777**************986 PP

  == domain 2  score: 75.3 bits;  conditional E-value: 3.3e-25
                   EEE-TT-EEE-TTSB-SEEEEEEES-EEEEEEETTS.EEEEEEE-TTEEESHHHHHHTS--SSEEEESSTEEEEEEEHHHHHHHH CS
  cNMP_binding   2 rsfkagevifrqGdpadslyivlsGevrvyrlsedgkevvlavlgpGdlfGelalltgeprtatvvAltdsellalprddflell 86 
                   ++++ag+vi+r+Gd+++ +y+++sG ++ y  ++d     ++++++Gd+fGelall+++pr+a+v+A+t+++++ l +d f++ll
    KHJ34616.1 345 QKLPAGTVIIREGDKGEAFYLLESGIAEAYIHNSDS---PVKHYQKGDYFGELALLNDAPRAASVIAKTEVKVATLGKDGFQRLL 426
                   689**************************9666666...9******************************************997 PP

>> RIIa  Regulatory subunit of type II PKA R-subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.0   1.7e-11   1.5e-07       8      35 ..      12      39 ..      11      43 .. 0.82

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 1.7e-11
                HHHHHHHHHH--S-HHHHHHHHHHHHHH CS
        RIIa  8 edltveVlraqPsDvlqFaadYFekLee 35
                e l++eVl+a P+D+ qF+a++F k +e
  KHJ34616.1 12 ETLNREVLTAEPDDIIQFCANHFAKILE 39
                5689*******************66433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 3455.04
//
Query:       KHJ34617.1  [L=209]
Description: putative bcas2 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-54  185.2   0.2    1.3e-54  185.1   0.2    1.0  1  BCAS2     Breast carcinoma amplified sequence 2 (BCAS2)


Domain annotation for each model (and alignments):
>> BCAS2  Breast carcinoma amplified sequence 2 (BCAS2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.1   0.2   7.1e-59   1.3e-54       2     197 ..       7     205 ..       6     209 .] 0.96

  Alignments for each domain:
  == domain 1  score: 185.1 bits;  conditional E-value: 7.1e-59
       BCAS2   2 vvDaLPYiDaeletpelreaveklieeElrrsrkkksd....laelPppkeeklespllaaeleRveageplealDlsRYe.leaPsaekkedleawee 95 
                 ++D+LPYiD+e+ tp++r+a+++lie+El ++ ++k+     ++++  +++ ++ sp+++ael+Rve+++pl+a+DlsRYe  + Ps +++ d e + +
  KHJ34617.1   7 IFDSLPYIDNEP-TPDERAAAQSLIEAELVTVDQQKKPdekiHPSISSLPKINF-SPCIQAELKRVENKQPLKAIDLSRYEtNDLPSFDDSCDNEVLFA 103
                 68**********.****************9999888767889999999999999.**************************999*************** PP

       BCAS2  96 alrnakaqlehqalRqeNleLlekygknaWrvhneqleaelkklekeleetkeeieevnrqRkseQeeageeLksleekWrelvsknleieaaceelea 194
                 alr+ ++++ +++ R++Nle le++gknaW+++n+qle++l++le++l+++k ei+ +  +Rk +Qe++g+e+kslee+W++ +++ le+e+a+ +l+ 
  KHJ34617.1 104 ALRSIYVSQVYLNNRKKNLEALETFGKNAWLLGNAQLESILRNLERDLAQKKSEIDICALERKLSQEAIGGEIKSLEESWKKAIGRALETEIAVDNLKS 202
                 ************************************************************************************************998 PP

       BCAS2 195 eie 197
                  i 
  KHJ34617.1 203 GIT 205
                 775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       722  (0.04027); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.20s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 1678.07
//
Query:       KHJ34618.1  [L=642]
Description: putative c2h2 finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.036   14.5   0.5      0.036   14.5   0.5    3.5  4  zf-H2C2_2  Zinc-finger double domain
       0.13   12.5   3.2        4.3    7.7   0.4    2.6  2  BolA       BolA-like protein
        4.4    8.0  24.0          1   10.0   1.0    5.2  4  zf-C2H2    Zinc finger, C2H2 type


Domain annotation for each model (and alignments):
>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.5     6e-06     0.036       9      26 .]     473     490 ..     471     490 .. 0.96
   2 ?   -2.7   0.4       1.7     1e+04       1       5 [.     502     506 ..     501     509 .. 0.69
   3 ?   -2.5   0.1       1.4   8.5e+03      16      24 ..     532     540 ..     526     540 .. 0.88
   4 ?   -3.2   1.8       2.4   1.4e+04       1       9 [.     584     593 ..     584     597 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 6e-06
   zf-H2C2_2   9 HtgekpyeCplCdkaFkt 26 
                 H +ek yeC +C+ +Fk+
  KHJ34618.1 473 HEQEKQYECAFCRNRFKN 490
                 99**************97 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.7
   zf-H2C2_2   1 nLrrH 5  
                 +LrrH
  KHJ34618.1 502 HLRRH 506
                 57777 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 1.4
   zf-H2C2_2  16 eCplCdkaF 24 
                 +C +C+  F
  KHJ34618.1 532 TCGFCGEDF 540
                 699**9776 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 2.4
   zf-H2C2_2   1 nLrrHirk.H 9  
                 ++r+H++  H
  KHJ34618.1 584 HFRQHLKHsH 593
                 5788888447 PP

>> BolA  BolA-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.4   0.00072       4.3       5      45 ..     386     424 ..     384     435 .. 0.84
   2 ?    4.5   0.1    0.0069        41      25      50 ..     473     498 ..     459     503 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00072
        BolA   5 lkpehlevedeShkhaghaeaggetHFkvvivseaFegksl 45 
                 ++p++++v++ Sh  +++  ++  + Fkv++  ++ ++ ++
  KHJ34618.1 386 ISPKSIDVINSSHTTSNQ--RHRRSSFKVNLQQKSSNDNKM 424
                 6899************99..99*******987766555555 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0069
        BolA  25 aggetHFkvvivseaFegkslvarhR 50 
                 +++e+ +++  + ++F++k+  +rh+
  KHJ34618.1 473 HEQEKQYECAFCRNRFKNKNEAERHQ 498
                 468999*******************8 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.2     0.078   4.7e+02       2      20 ..     453     474 ..     452     476 .. 0.81
   2 ?   10.0   1.0   0.00017         1       1      23 []     479     502 ..     479     502 .. 0.97
   3 ?    4.4   0.4    0.0099        59       2      14 ..     532     544 ..     531     545 .. 0.89
   4 ?    3.2   4.4     0.024   1.4e+02       6      23 .]     573     593 ..     571     593 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.078
                 EETTTT...EEESSHHHHHHHH CS
     zf-C2H2   2 kCpdCg...ksFkrksnLkrHi 20 
                  C+ C+   k+F +k++L +H 
  KHJ34618.1 453 ICECCPkkpKKFDNKEDLDAHE 474
                 566677888*********9995 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00017
                 EEETTTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                 y+C  C  +Fk+k + +rH+++ H
  KHJ34618.1 479 YECAFCRNRFKNKNEAERHQNSlH 502
                 99*******************999 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.0099
                 EETTTTEEESSHH CS
     zf-C2H2   2 kCpdCgksFkrks 14 
                 +C+ Cg+ F+r+ 
  KHJ34618.1 532 TCGFCGEDFPRSR 544
                 7*********986 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.024
                 TT..EEESSHHHHHHHHHC.C CS
     zf-C2H2   6 Cg..ksFkrksnLkrHirt.H 23 
                 C+  k+F r +++++H++  H
  KHJ34618.1 573 CNhdKKFFRADHFRQHLKHsH 593
                 777799***********9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (642 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1149  (0.0640861); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.24s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4677.31
//
Query:       KHJ34619.1  [L=311]
Description: putative protein amidase-hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.5e-09   35.7   0.0    1.1e-08   34.8   0.0    1.5  2  CN_hydrolase  Carbon-nitrogen hydrolase


Domain annotation for each model (and alignments):
>> CN_hydrolase  Carbon-nitrogen hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   0.0   5.9e-13   1.1e-08       1     117 [.       2     132 ..       2     169 .. 0.82
   2 ?   -3.9   0.0      0.38   6.9e+03     210     228 ..     246     262 ..     231     263 .. 0.75

  Alignments for each domain:
  == domain 1  score: 34.8 bits;  conditional E-value: 5.9e-13
                   EEEEEEBB-STTHHHHHHHHHHHHHHHHHHTTESEEEEETTTTTBS.....SSHHHHHHHHBHSSSHHHHHHHHHHHHHTEEEEEEEEEEEC..... CS
  CN_hydrolase   1 rvAvvQlpqkaadleanlqklleliaeAarkgadLivlPElfitgy.....keeahfleaAeaglgetlallaalarkngiavviglierel..... 87 
                   ++A+ Q  + + ++++ ++k+++li++    ++dL++lPEl+  gy     ++ +  le A+   g+t  + ++ a++ + +v++g++e        
    KHJ34619.1   2 KIAILQFVPLKGNIKGSIAKVEKLIQNLRPGDVDLLALPELAFAGYnfpslESIKPCLEHAQ--SGPTGIWAKQTAKRLQSIVTVGYAETTSkrvai 96 
                   689999888779999************8888***************7766655555555555..8************************976999** PP

                   ......CTTEEEEEEEEEEEETTSEEEEEEE-SS-- CS
  CN_hydrolase  88 ......tngklqayntavlldldgklvgkyrKlhLf 117
                           ++   +n+ + +  dgk+++ yrK+ L 
    KHJ34619.1  97 ndnsleNIDRNMNFNSNIAFGSDGKMIAHYRKHFLY 132
                   *999994455557*******************9886 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 0.38
                   EBEEEHCETTEEEE--EEE CS
  CN_hydrolase 210 nqvggyeqlilwpvghSai 228
                   n++g+  + ++++vg S i
    KHJ34619.1 246 NRCGV--EHDVVFVGTSTI 262
                   67777..889999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (311 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       457  (0.0254894); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2544.36
//
Query:       KHJ34620.1  [L=503]
Description: putative ph domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.2e-05   23.2   0.0    0.00023   21.6   0.0    1.9  2  PH           PH domain
    0.00059   19.6   5.5     0.0045   16.7   0.7    2.6  2  DUF713       Protein of unknown function (DUF713)
  ------ inclusion threshold ------
       0.77    9.2   5.1        0.4   10.1   0.1    2.5  2  Cir_Bir_Yir  Plasmodium variant antigen protein Cir/Yir/Bir
        5.1    7.7   8.4        2.7    8.6   0.2    3.6  4  DUF4473      Domain of unknown function (DUF4473)


Domain annotation for each model (and alignments):
>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       1.6     7e+03      17      36 ..     158     177 ..     134     219 .. 0.66
   2 !   21.6   0.0   5.1e-08   0.00023       4     104 ..     307     412 ..     304     413 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.6
                 SEEEEEEEEETTEEEEESST CS
          PH  17 swkkrwfvLkdsellyyknd 36 
                 +  ++++ L +++++ ++++
  KHJ34620.1 158 NLTQKYIELLGQNVAGFESS 177
                 55566666666666666666 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 5.1e-08
                 EEEEEEETSSSSC..SEEEEEEEEETTE.EEEESST.TCTTESSEEEEEESTTEEEEEEEC.TTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHH CS
          PH   4 eGwLlkkgsgkkk..swkkrwfvLkdse.llyyknd.ksekdkepkgsislsncevvevva.tedpkrkfcfelriverngsrtyllqasseeerkeWi 97 
                  G L +k+ +k +  ++   ++v++ s+ l  +k++    ++ +p  si l ++++  +   + + k k + +   ++ +g + ++++a+s+ee+++W+
  KHJ34620.1 307 AGTLERKSRNKLSfaGFTTGYYVVTMSKfLHEFKDEdFAQREPDPELSIYLPEATIGVTSGeKFSVKGKDVSKGLSSKLSGNSDLHFKAASPEEAQRWV 405
                 57777777777778888886667764445*******9999999*************97655522555555555555555556***************** PP

                 HHHHHHH CS
          PH  98 kaiqsai 104
                 +a+q +i
  KHJ34620.1 406 QALQGVI 412
                 ***9775 PP

>> DUF713  Protein of unknown function (DUF713)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.7     1e-06    0.0045       7      97 ..      69     156 ..      60     167 .. 0.75
   2 !    4.5   0.4    0.0056        25      40      70 ..     208     239 ..     199     272 .. 0.59

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 1e-06
      DUF713   7 keskqrlaallkCiqlklrFeekEqewsdwlkklrepivklknrfsdfeeeikksdkeekklekedleelqselsnLakkvlsaynkLeea 97 
                 ke ++ l++l   +++ ++F++k    +++ +++r++i +l+n++++ e++ik+s+     +e+  ++e++++ +++++   +  +++e+a
  KHJ34620.1  69 KEYQRVLKTLQGPLRAGHHFDQKVGGIASLFENMRQNIHELVNSYLETEKNIKEST--IPIIEQ-LRKEIKNQSKEFSSVAVKGAKDVEKA 156
                 56677778888889999***********************************9999..333333.55666666666666655555554443 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0056
      DUF713  40 lrepivklknrfsdfeeeikksd.keekklek 70 
                  r+ +v+l+n+f++fe+ + +    + ++l++
  KHJ34620.1 208 QRQVLVTLQNNFHQFEQHVIEVIqTSLSSLTN 239
                 49999999999999998764443033333333 PP

>> Cir_Bir_Yir  Plasmodium variant antigen protein Cir/Yir/Bir
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   1.3      0.13     6e+02     135     184 ..     119     168 ..      48     184 .. 0.61
   2 ?   10.1   0.1     9e-05       0.4     186     228 ..     200     251 ..     195     306 .. 0.69

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.13
  Cir_Bir_Yir 135 nidikdiskfYdafklLCnmyteldekksnckkylekaneFvekYkelnn 184
                  ni+ + i  + ++ k++ n  +e+++   +  k +eka++  +kY el  
   KHJ34620.1 119 NIKESTIPIIEQLRKEIKNQSKEFSSVAVKGAKDVEKARNLTQKYIELLG 168
                  23444444444455555555666666666666666777777777766665 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 9e-05
  Cir_Bir_Yir 186 snitkdssynqvLstLsndYnnlkkkckke.kkkipslpeikk...........t 228
                  ++i +++s +qvL tL+n+++++++++ +  +++++sl+   +            
   KHJ34620.1 200 KQIIEENSQRQVLVTLQNNFHQFEQHVIEViQTSLSSLT---NflntqaqsqqeY 251
                  578899******************998666433444444...2222344444440 PP

>> DUF4473  Domain of unknown function (DUF4473)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.2      0.17   7.6e+02      48      72 ..      52      76 ..      49      78 .. 0.85
   2 ?    0.2   0.1      0.25   1.1e+03      27      60 ..     106     139 ..      92     145 .. 0.73
   3 ?   -1.0   0.1      0.61   2.7e+03      30      53 ..     141     164 ..     120     167 .. 0.53
   4 ?    8.6   0.2    0.0006       2.7      46      75 ..     227     256 ..     215     258 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.17
     DUF4473 48 afeklkaevdafiktqseeDqaayk 72
                +fe++++ ++++  +q +e q++ k
  KHJ34620.1 52 TFEDYIKTTEKVQRSQAKEYQRVLK 76
                6899999999999999999988776 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.25
     DUF4473  27 iaekfksefakakgdkeaakkafeklkaevdafi 60 
                 i e ++s  +++k+ ke++  ++e+l +e ++  
  KHJ34620.1 106 IHELVNSYLETEKNIKESTIPIIEQLRKEIKNQS 139
                 5555566677778888999988888888766544 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.61
     DUF4473  30 kfksefaka....kgdkeaakkafeklk 53 
                 +f s    +    ++d e+a+++ +k++
  KHJ34620.1 141 EFSS----VavkgAKDVEKARNLTQKYI 164
                 2222....22333556666666666655 PP

  == domain 4  score: 8.6 bits;  conditional E-value: 0.0006
     DUF4473  46 kkafeklkaevdafiktqseeDqaaykafv 75 
                  +++++ ++ + +f +tq +++q+ y +++
  KHJ34620.1 227 IEVIQTSLSSLTNFLNTQAQSQQEYYSDVM 256
                 68999999******************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (503 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1621  (0.0904122); expected 358.6 (0.02)
Passed bias filter:                      682  (0.0380389); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 3542.91
//
Query:       KHJ34621.1  [L=253]
Description: hypothetical protein EV44_g0506 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (253 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       550  (0.0306766); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1908.73
//
Query:       KHJ34622.1  [L=355]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       473  (0.0263818); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.20s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 2995.15
//
Query:       KHJ34623.1  [L=1531]
Description: putative btb poz domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-24   84.5   0.1      5e-05   23.8   0.1    4.9  4  RCC1      Regulator of chromosome condensation (RCC1) repeat
    2.7e-10   40.5   0.5      4e-08   33.5   0.0    2.8  2  BTB       BTB/POZ domain
    3.3e-08   33.9   0.1    6.2e-07   29.8   0.0    2.5  2  Ank_4     Ankyrin repeats (many copies)
    9.8e-07   28.6   0.1      0.079   13.6   0.0    3.1  2  Ank_3     Ankyrin repeat
    1.4e-05   24.7  11.6    2.2e-05   24.1   0.2    4.2  5  RCC1_2    Regulator of chromosome condensation (RCC1) repeat
    8.2e-05   23.1   0.0    0.00024   21.7   0.0    1.7  1  Ank_2     Ankyrin repeats (3 copies)
     0.0041   17.5   0.0       0.24   11.9   0.0    2.7  2  Ank       Ankyrin repeat
  ------ inclusion threshold ------
      0.037   14.4   0.0       0.18   12.2   0.0    2.2  2  Ank_5     Ankyrin repeats (many copies)


Domain annotation for each model (and alignments):
>> RCC1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.1e-05     0.024       3      31 ..     235     263 ..     234     268 .. 0.92
   2 !   23.8   0.1   2.2e-08     5e-05       3      50 .]     331     380 ..     329     380 .. 0.93
   3 !   21.6   0.0   1.1e-07   0.00026       1      49 [.     383     440 ..     383     441 .. 0.82
   4 !   17.7   0.0   1.8e-06     0.004       4      47 ..     446     494 ..     443     497 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.1e-05
                 EEEEEE--GGGTTSSSS---EEEEEE-GG CS
        RCC1   3 rVysWGrndyGqLGlgttesvlvPtkveg 31 
                 +V++WG+n ++ LG  +++++++P k+++
  KHJ34623.1 235 EVLAWGSNRNHGLGFRDQDDRHHPEKISL 263
                 79************************976 PP

  == domain 2  score: 23.8 bits;  conditional E-value: 2.2e-08
                 EEEEEE--GGGTTSSSS---E..EEEEE-GGGTTS-EEEEEEETTEEEEE CS
        RCC1   3 rVysWGrndyGqLGlgttesv..lvPtkveglsgnrvvkvacGddhtval 50 
                 ++y +G++  G+LG+g+++++   vP     lsg +v+k+a G +ht+al
  KHJ34623.1 331 NLYMCGFGPGGRLGTGDQDTRfsYVPIHCGVLSGLKVSKIALGINHTLAL 380
                 69****************8886678********99*************97 PP

  == domain 3  score: 21.6 bits;  conditional E-value: 1.1e-07
                 TTEEEEEE--GGGTTSS.......SS---E.EEEEE-GGGTTS-EEE.EEEETTEEEE CS
        RCC1   1 dGrVysWGrndyGqLGl.......gttesv.lvPtkveglsgnrvvk.vacGddhtva 49 
                 dG+++sWG+n + qLG        +++e v l P+ v g  ++++++ va+ + h+va
  KHJ34623.1 383 DGSIFSWGSNLHFQLGYslslstlQNEEPVsLNPRIVGGILKREIIDgVAASGIHSVA 440
                 8****************7665444444444445****999999****9********98 PP

  == domain 4  score: 17.7 bits;  conditional E-value: 1.8e-06
                 EEEEE--GGGTTSSSS---E.....EEEEE-GGGTTS.-EEEEEEETTEE CS
        RCC1   4 VysWGrndyGqLGlgttesv.....lvPtkveglsgn.rvvkvacGddht 47 
                 +++WG+n +GqLGl ++es+     + P+kv+ +  + ++ +v++ dd t
  KHJ34623.1 446 LFTWGKN-EGQLGLVDSESRnleyqSEPRKVAASLFKaPINSVCAIDDAT 494
                 8****65.7*****9997775555566****8777666777777755555 PP

>> BTB  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.1     0.023        52      10      78 ..     756     843 ..     749     881 .. 0.69
   2 !   33.5   0.0   1.8e-11     4e-08      12     107 ..     909    1023 ..     903    1026 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.023
                 TS-EEEEETT.TEEEEE-HHHHHHH-HHHHHHHTST.................TTTTCCCE...EEEETTSGHHHHHHHHHHHHHSEEEC CS
         BTB  10 lcDvtlvvgd.gkefkahkavLaarSpyFkalftsk.................eieessvs...eielddvepeafealLefiYtgelei 78 
                  +Dv + + + + ++++h +vL  +S   +a+++                   +++++  s    +  +++++ ++ +l+ +iY++ l  
  KHJ34623.1 756 GFDVEVGTSTsDIKIPVHSFVLGRSSVLRNAIINLRrfpekaisneffsikdrKDKDK--SleiSLIFEKMNFITLFNLIVYIYSDILVD 843
                 4555555555579999999999765555555555558888888888887765422222..244677789999999999999999997655 PP

  == domain 2  score: 33.5 bits;  conditional E-value: 1.8e-11
                  -EEEEETTTEEEEE-HHHHHHH-HHHHHHHTST..........TTTTCCCEEEEETTSGHHHHHHHHHHHHHSEEEC-...........CGGGHHHH CS
         BTB   12 DvtlvvgdgkefkahkavLaarSpyFkalftsk..........eieessvseielddvepeafealLefiYtgeleit...........seenleel 87  
                  D ++ ++ ++e  ah ++L+ r p+F+ lf++           + e+ +  +++l+ +++ +f  +L+ iY++                +++ + ++
  KHJ34623.1  909 DTIIELK-DSETFAHSVILCRRCPFFEGLFNGRaagrwllnrhQ-ETPKHIRVNLKHINSYTFCFVLRHIYSDIGLELfadvvcanideFSNLVLDV 1003
                  89999**.6****************************9998733.3333348*******************995444488999*****988999*** PP

                  HHHHHHHT-HHHHHHHHHHH CS
         BTB   88 Laaadllqiprlkkaceefl 107 
                  +a+ad l ++rl ++c++ l
  KHJ34623.1 1004 MAVADELMLDRLSQVCQKTL 1023
                  ****************9976 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.015        35      26      44 ..      82      99 ..      75     105 .. 0.86
   2 !   29.8   0.0   2.8e-10   6.2e-07       2      48 ..      91     141 ..      90     148 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.015
       Ank_4 26 dinaqdnrsGetalhiAak 44
                +in + + +G+t+lh+A++
  KHJ34623.1 82 EINSR-DCNGLTLLHRAVS 99
                79999.778********96 PP

  == domain 2  score: 29.8 bits;  conditional E-value: 2.8e-10
       Ank_4   2 ltaLhyaai...sgrlel...vrlLlek.gadinaqdnrsGetalhiAakrgnv 48 
                 lt+Lh+a++   s    +   + +Ll++  +di+ qd ++G+t+lh+A+++gn 
  KHJ34623.1  91 LTLLHRAVSstsS---LMnefAISLLDHpSIDIYVQDRENGWTPLHRALYFGNA 141
                 7999999997542...2224355778**99******9999************94 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   0.00013      0.28       1      30 [.      89     121 ..      89     122 .. 0.86
   2 !   13.6   0.0   3.5e-05     0.079       1      24 [.     127     150 ..     127     157 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00013
       Ank_3   1 nGetpLhlAarsgnlei...vkfLlenkgadvn 30 
                 nG t+Lh+A++s++  +   ++ Ll+++ +d++
  KHJ34623.1  89 NGLTLLHRAVSSTSSLMnefAISLLDHPSIDIY 121
                 79*************65444999999*****97 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 3.5e-05
       Ank_3   1 nGetpLhlAarsgnleivkfLlen 24 
                 nG+tpLh+A+ +gn  i++ ++++
  KHJ34623.1 127 NGWTPLHRALYFGNAIIAREIIRK 150
                 7*********************95 PP

>> RCC1_2  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.2    0.0077        17      17      27 ..     233     243 ..     230     246 .. 0.79
   2 !   24.1   0.2   9.6e-09   2.2e-05       1      27 [.     367     393 ..     367     396 .. 0.91
   3 ?    0.4   0.1      0.27   6.1e+02      16      27 ..     442     453 ..     434     455 .. 0.87
   4 ?   -3.1   0.0       3.3   7.4e+03      11      23 ..     494     506 ..     491     506 .. 0.83
   5 ?   -2.8   0.1       2.7   6.1e+03      11      20 ..     607     616 ..     607     619 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0077
      RCC1_2  17 dGeVlcWGsNs 27 
                  +eVl+WGsN 
  KHJ34623.1 233 GDEVLAWGSNR 243
                 468*******5 PP

  == domain 2  score: 24.1 bits;  conditional E-value: 9.6e-09
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsNs 27 
                 V +++ G +H++aL++dG +++WGsN 
  KHJ34623.1 367 VSKIALGINHTLALVADGSIFSWGSNL 393
                 678999********************5 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.27
      RCC1_2  16 edGeVlcWGsNs 27 
                 +++ +++WG N+
  KHJ34623.1 442 SSNYLFTWGKNE 453
                 57889****995 PP

  == domain 4  score: -3.1 bits;  conditional E-value: 3.3
      RCC1_2  11 scaLtedGeVlcW 23 
                 +++L+++ +V+ +
  KHJ34623.1 494 TIVLLSNHIVYVF 506
                 89******99975 PP

  == domain 5  score: -2.8 bits;  conditional E-value: 2.7
      RCC1_2  11 scaLtedGeV 20 
                 s+++te+G V
  KHJ34623.1 607 SVGITENGCV 616
                 689*****88 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.0     1e-07   0.00024      20      74 ..      81     149 ..      68     158 .. 0.76

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 1e-07
       Ank_2  20 adpn..k.ngktaLhyAakngnl...eivklLleh.......ad.ndgrtpLhyAarsghleivklLle 74 
                 +++n  + ng+t Lh A+++++    e++  Ll+h       +d ++g+tpLh A  +g+  i++  + 
  KHJ34623.1  81 TEINsrDcNGLTLLHRAVSSTSSlmnEFAISLLDHpsidiyvQDrENGWTPLHRALYFGNAIIAREIIR 149
                 556654369**********9854243668888888997777655889*********9999878777774 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.096   2.2e+02       1      11 [.      89     103 ..      89     124 .. 0.67
   2 !   11.9   0.0   0.00011      0.24       1      29 [.     127     154 ..     127     158 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.096
                 TSBBHHHHHH....H CS
         Ank   1 dGnTPLHlAa....t 11 
                 +G T LH+A+    +
  KHJ34623.1  89 NGLTLLHRAVsstsS 103
                 799*****9865441 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00011
                 TSBBHHHHHHHHTTHHHHHHHHTTTSTTC CS
         Ank   1 dGnTPLHlAatngkkriiklLLhGAnlna 29 
                 +G+TPLH+A ++g++ i+++++ + +l +
  KHJ34623.1 127 NGWTPLHRALYFGNAIIAREII-RKDLES 154
                 7********9****99999988.556554 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0         2   4.4e+03      11      25 ..      85      99 ..      82     103 .. 0.73
   2 ?   12.2   0.0   7.9e-05      0.18      11      43 ..     124     156 ..     112     163 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2
       Ank_5 11 rldgggntpLhvAak 25
                 +d +g t Lh A++
  KHJ34623.1 85 SRDCNGLTLLHRAVS 99
                445566699**9986 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 7.9e-05
       Ank_5  11 rldgggntpLhvAakygaadvvrlLl.argadln 43 
                 ++++g+ tpLh A + g+a ++r+++ +  ++ n
  KHJ34623.1 124 DRENGW-TPLHRALYFGNAIIAREIIrKDLESVN 156
                 444555.*****************9965555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1065  (0.059401); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.89u 0.27s 00:00:01.16 Elapsed: 00:00:00.45
# Mc/sec: 10290.61
//
Query:       KHJ34624.1  [L=239]
Description: hypothetical protein EV44_g3586 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00084   18.7   0.8     0.0012   18.2   0.8    1.1  1  CorA      CorA-like Mg2+ transporter protein


Domain annotation for each model (and alignments):
>> CorA  CorA-like Mg2+ transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.8   6.8e-08    0.0012     117     192 ..      13      87 ..      11      98 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 6.8e-08
        CorA 117 deivdrlfellekleeeldeledeledstkkeilrelaqlrrrlvklrralapnrevlkrllakaddkllddedke 192
                  +++++l + l++++++ + le+++ +  + + ++++ +++++ ++++++l ++++ l++l++++ ++++++ed+e
  KHJ34624.1  13 FSLNKKLKDSLDEIDTRFKHLEKTI-ELGHSNTAGRMGKVEEQNANIEKILVQMQKSLSTLIQSKGNPKESKEDAE 87 
                 6899*********************.999999*******************************6666666666543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1411  (0.0786993); expected 358.6 (0.02)
Passed bias filter:                      664  (0.037035); expected 358.6 (0.02)
Passed Vit filter:                        76  (0.00423894); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 1819.16
//
Query:       KHJ34625.1  [L=296]
Description: hypothetical protein EV44_g3373 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-05   24.7   4.2    2.4e-05   24.2   4.2    1.2  1  zf-CCHC    Zinc knuckle
  ------ inclusion threshold ------
      0.026   14.2   3.3      0.044   13.5   3.3    1.3  1  zf-CCHC_5  GAG-polyprotein viral zinc-finger
      0.043   13.6   5.6      0.076   12.9   5.6    1.4  1  zf-CCHC_2  Zinc knuckle
       0.14   11.6   0.8        3.3    7.2   0.0    2.5  3  UFD1       Ubiquitin fusion degradation protein UFD1
       0.15   12.1   3.1       0.26   11.3   3.1    1.4  1  zf-CCHC_3  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.2   4.2   6.6e-09   2.4e-05       2      18 .]     259     275 ..     258     275 .. 0.94

  Alignments for each domain:
  == domain 1  score: 24.2 bits;  conditional E-value: 6.6e-09
                 CTSSSSSSSSTTTTSTS CS
     zf-CCHC   2 kCynCGepGHiardCpk 18 
                  Cy CG+ GH+a+ Cp+
  KHJ34625.1 259 ICYACGKKGHWANKCPH 275
                 6***************8 PP

>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   3.3   1.2e-05     0.044       2      18 ..     257     273 ..     256     275 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.2e-05
                 --B-TTT-SSBS-TTT- CS
   zf-CCHC_5   2 pglCpRCkkgkHwardC 18 
                 ++ C  C+k  Hwa+ C
  KHJ34625.1 257 EDICYACGKKGHWANKC 273
                 799************** PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   5.6   2.1e-05     0.076       5      20 ..     259     274 ..     259     275 .. 0.95

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.1e-05
   zf-CCHC_2   5 vChiCgkkGHyIqdCP 20 
                 +C +CgkkGH+ + CP
  KHJ34625.1 259 ICYACGKKGHWANKCP 274
                 799************9 PP

>> UFD1  Ubiquitin fusion degradation protein UFD1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   0.0   0.00091       3.3      83     133 ..      31      81 ..      23      92 .. 0.87
   2 ?   -1.7   0.0       0.5   1.8e+03      25      55 ..     106     138 ..      98     143 .. 0.71
   3 ?    2.0   0.1     0.036   1.3e+02      31      91 ..     167     227 ..     164     252 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.00091
        UFD1  83 leegdlveiesvslpkgkfvklqpqsedfldisdpkavLekaLrnfatLtk 133
                 +++  + ++++  + k ++  +++ se fl++s+ ++ L+ aL  +   ++
  KHJ34625.1  31 IQDDAFTSVKNKVILKPEWQLIRADSEVFLKLSNIQNALQMALIPYHLWSQ 81 
                 566677889999999999*************************99987665 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.5
        UFD1  25 iiLPpsaLdeLtrlni.eyPml.Felsnkkkkk 55 
                 i+L + ++++++rln+ ++P++ F+l ++k+++
  KHJ34625.1 106 ILLLEAIFATMQRLNVlHSPLTtFSLLSPKNNE 138
                 677777888888887635776558888776665 PP

  == domain 3  score: 2.0 bits;  conditional E-value: 0.036
        UFD1  31 aLdeLtrlnie..yPmlFelsnkkkkksthagVleFtaeegtvylPewmmenlgleegdlvei 91 
                  L+eL++ n+   + + F  + +++++++   V +F+++  +  l + m +n ++++ d   i
  KHJ34625.1 167 LLKELVQTNLPrtWTLAFPHTFSSNNQEIVEMVVQFSSQIMKWPLEDKMTRNSHINTLDN--I 227
                 68999999987235555666666788899999******9999999999999999987664..3 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   3.1   7.3e-05      0.26       6      23 ..     259     279 ..     255     291 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 7.3e-05
   zf-CCHC_3   6 aCQkClkkGHwtYECkn...a 23 
                  C  C+kkGHw+  C+    +
  KHJ34625.1 259 ICYACGKKGHWANKCPHyqnQ 279
                 6999***********976442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2148.96
//
Query:       KHJ34626.1  [L=214]
Description: putative nadh-ubiquinone oxidoreductase 21kda subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.1e-36  122.8   2.5    6.9e-36  122.4   2.5    1.2  1  ETC_C1_NDUFA4  ETC complex I subunit conserved region


Domain annotation for each model (and alignments):
>> ETC_C1_NDUFA4  ETC complex I subunit conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.4   2.5   3.9e-40   6.9e-36       1      95 [.     110     206 ..     110     207 .. 0.97

  Alignments for each domain:
  == domain 1  score: 122.4 bits;  conditional E-value: 3.9e-40
                    EEEEE--SS--STTTT-SS--EEEEEEEESS..S---TTT-SSSS--SEEECEEEESSHHHHHHHHHHCT-EEEEE-SST-XXXXXXXXXXXXXXX CS
  ETC_C1_NDUFA4   1 kvrIykpaknamqsGkaktkkWklefeeqek..rwenplmGWtssaDtlsqvslkFdskedAiayaekqgweyeveepkkrkvkpksYadnfsvkr 94 
                    +vrIy+pak a+qsG+   ++W+++++  +k  rwenplmGW+ss+D +++++++F++ke+Ai++ae+qg+ey v+ep++rk++pk+Ya+nf ++ 
     KHJ34626.1 110 TVRIYRPAKPATQSGNWYGDRWRMDWDILSKghRWENPLMGWQSSGDFMQATHMTFKTKEEAIQFAENQGYEYIVHEPNTRKITPKAYANNFLWSD 205
                    69*************************999889*************************************************************97 PP

                    X CS
  ETC_C1_NDUFA4  95 k 95 
                    k
     KHJ34626.1 206 K 206
                    6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       339  (0.0189079); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1541.95
//
Query:       KHJ34627.1  [L=343]
Description: putative pi31 proteasome regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.7e-46  156.3   0.0    5.4e-45  153.1   0.0    2.0  1  PI31_Prot_N  PI31 proteasome regulator N-terminal
    3.5e-15   56.9   8.6    3.5e-15   56.9   8.6    2.2  2  PI31_Prot_C  PI31 proteasome regulator


Domain annotation for each model (and alignments):
>> PI31_Prot_N  PI31 proteasome regulator N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.1   0.0     6e-49   5.4e-45       2     162 ..      26     162 ..      25     163 .. 0.94

  Alignments for each domain:
  == domain 1  score: 153.1 bits;  conditional E-value: 6e-49
  PI31_Prot_N   2 ssdLsssydalallvHacmtalgFrlvglgedkkieesesksecqslaprLpaeWnassdsysFrYaheqssmefvlkvdrlgnklvirglalgddki 99 
                  +s Lsssy+a+al++Hacm+ +gFrl+g++e +++      +ec++laprLp+eWn+ ++s++F Yah+qssm+fv+kvdrlg+k++irg+ lgd++i
   KHJ34627.1  26 TSYLSSSYEAIALFCHACMIVSGFRLLGFKEGQNL------DECSRLAPRLPQEWNSTFNSHTFFYAHQQSSMQFVIKVDRLGSKAEIRGIGLGDERI 117
                  789********************************......59******************************************************* PP

  PI31_Prot_N 100 asfelavrdyvsssalPvritgedrsdlaeklkdvfiseerladLisllkvsivqklvpglsk 162
                   +fe+++rdy+s + lP+ri+                     +dL+s ++  iv+klvp+l+k
   KHJ34627.1 118 NRFEVTARDYISLNSLPLRIK------------------ISSDDLASIFDLAIVKKLVPSLNK 162
                  *****************9964..................345788999999999999999998 PP

>> PI31_Prot_C  PI31 proteasome regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   2.6         2   1.8e+04      18      18 ..     222     222 ..     186     250 .. 0.61
   2 !   56.9   8.6   3.9e-19   3.5e-15       1      78 []     253     320 ..     253     320 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 2
  PI31_Prot_C  18 r 18 
                   
   KHJ34627.1 222 D 222
                  2 PP

  == domain 2  score: 56.9 bits;  conditional E-value: 3.9e-19
  PI31_Prot_C   1 iGdsDLyPpglgphdPLrgpgglpspgggdggggGmhvgpdhPlfkrsengpggrggpdgfelppavpPGARfDPvgp 78 
                  iG +DL+P+glgphdPLrg++     gg +gg +Gmh+++d Plf     g++gr+    +  +p+vp GAR+DP+gp
   KHJ34627.1 253 IGYDDLNPQGLGPHDPLRGSFTG---GGFSGGISGMHPTFDGPLF----GGSEGRSR---NARRPEVPEGARYDPIGP 320
                  799***************66664...4667889************....33333332...24789************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       277  (0.0154498); expected 358.6 (0.02)
Passed bias filter:                      244  (0.0136092); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2574.25
//
Query:       KHJ34628.1  [L=382]
Description: putative sec14 cytosolic factor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.1e-22   78.6   0.0    6.1e-22   78.0   0.0    1.2  1  CRAL_TRIO    CRAL/TRIO domain
    3.7e-09   36.6   0.0    9.2e-09   35.4   0.0    1.7  1  CRAL_TRIO_N  CRAL/TRIO, N-terminal domain


Domain annotation for each model (and alignments):
>> CRAL_TRIO  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.0   0.0   6.8e-26   6.1e-22      11     159 .]     110     287 ..     102     287 .. 0.90

  Alignments for each domain:
  == domain 1  score: 78.0 bits;  conditional E-value: 6.8e-26
   CRAL_TRIO  11 ihgr.Dkegrpvlylrlgrfdpk......klsle.......................elvralvlvlerllkeleedgqvegvtvviDlkglslskmlw 79 
                 ++gr D++g p+++  +++ + +      +ls++                       ++v++++ +++++ +   +d+++  ++ ++D++g++ +k  w
  KHJ34628.1 110 WTGRcDRRGIPIFLYDVKQLNSNamatydDLSKAsqsevivdnnktprfsrlfalyeDMVNFVMPLCTAVSNRKYPDAPISLCCNLVDVSGVG-LKSFW 207
                 45555*****************99887774443367789*****************999999999999999877779****************.55666 PP

   CRAL_TRIO  80 kpisllkkilkilqdnyperlgkilivnaPklfkfafklvkpfldektreKikfvspsnteatlekyidpeqlpkelGGt 159
                 +  + + + + +  ++ype+l +i+iv  P++f +++  + ++ d++t++Ki ++++s++ ++l++ i+p+++pk++GG+
  KHJ34628.1 208 NLKDHMLNASVLATAHYPETLDRIIIVGTPSFFPMVWGWIQKWFDANTTSKILILGGSDVLEKLSSIIEPQNIPKKYGGQ 287
                 77999999999999*****************************************************************6 PP

>> CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   0.0     1e-12   9.2e-09       2      53 ..      29      77 ..      28      78 .. 0.88

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 1e-12
  CRAL_TRIO_N  2 ydellahlqeseyklteeekfW.ltredhddaclLRfLRArkwdvekAikrLe 53
                 ++++++ + e +y+ ++      l+r +hdd +lLRfLRAr++d+  Ai++++
   KHJ34628.1 29 LQQFKHICREKGYY-VPA---SdLSRASHDDTTLLRFLRARRFDLVPAIDQFT 77
                 68999999999999.554...449999************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 3045.64
//
Query:       KHJ34629.1  [L=1220]
Description: putative atp synthase subunit mitochondrial protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       980  (0.05466); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.75u 0.26s 00:00:01.01 Elapsed: 00:00:00.41
# Mc/sec: 8959.78
//
Query:       KHJ34630.1  [L=214]
Description: putative ras-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.4e-58  194.7   0.1    8.6e-58  194.5   0.1    1.0  1  Ras           Ras family
      9e-20   71.1   0.0    1.3e-19   70.6   0.0    1.2  1  Roc           Ras of Complex, Roc, domain of DAPkinase
    1.3e-08   34.5   0.0    1.4e-08   34.4   0.0    1.1  1  Arf           ADP-ribosylation factor family
    2.6e-05   23.9   0.1    0.00017   21.2   0.0    1.9  2  GTP_EFTU      Elongation factor Tu GTP binding domain
    0.00012   22.0   0.3       0.41   10.5   0.0    2.3  2  RsgA_GTPase   RsgA GTPase
     0.0014   18.2   0.0     0.0023   17.5   0.0    1.4  1  FeoB_N        Ferrous iron transport protein B
      0.006   16.6   0.0      0.013   15.5   0.0    1.6  1  MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain
      0.006   16.7   0.0     0.0089   16.1   0.0    1.3  1  MMR_HSR1      50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  194.5   0.1   3.8e-61   8.6e-58       1     161 [.      10     170 ..      10     171 .. 0.99

  Alignments for each domain:
  == domain 1  score: 194.5 bits;  conditional E-value: 3.8e-61
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikr 99 
                 Klv+vG ++vGK++l+++ ++++F +ey++Ti +d+y+k++ +d++ + l+++DTAGqee++++re+y+r++eg+llvy+itsr+sf+++  + ++i r
  KHJ34630.1  10 KLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTI-EDSYRKQCVIDEEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFDEILVFQQQILR 107
                 99******************************.****************************************************************** PP

                 HST.TTSEEEEEEETTTGGGG-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHHH CS
         Ras 100 vae.envpivLvGnKvDleekravsteegeelakelglkfletSAktnenveeafeellreil 161
                 v++ + +pi++vGnK+Dle++r+vs++ege+l++++g+kf+etSAk++ nv++af++l+rei+
  KHJ34630.1 108 VKDkDYFPIIVVGNKCDLENDRQVSEAEGEALSRSFGCKFIETSAKSRINVDNAFYDLVREIR 170
                 **97789*****************************************************996 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.6   0.0   5.8e-23   1.3e-19       1     120 []      10     125 ..      10     125 .. 0.86

  Alignments for each domain:
  == domain 1  score: 70.6 bits;  conditional E-value: 5.8e-23
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 K+v+vG +gvGK++l  ++++++f +++++ti  ++ + +++ i+     ++     l++ DtaGqe+++++++ y+r  + ++lvy    ++s++++ 
  KHJ34630.1  10 KLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRK-QCV-ID-----EE--VALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSitsRQSFDEIL 99 
                 99*******************************99865.553.33.....23..4689*****************************954333456777 PP

                 HHHHHHHHHCSSS..-EEEEEE-TTT CS
         Roc  97 eWlkelkkvagks..pvilvgnkiDl 120
                    +++ +v +k+  p+i+vgnk+Dl
  KHJ34630.1 100 VFQQQILRVKDKDyfPIIVVGNKCDL 125
                 7999999999887779********95 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.0   6.3e-12   1.4e-08      13     139 ..       7     137 ..       1     169 [. 0.79

  Alignments for each domain:
  == domain 1  score: 34.4 bits;  conditional E-value: 6.3e-12
                 TEEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEEEEEEEE..TTEE.EEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHH CS
         Arf  13 kelrilllGLDnaGKtTilkklkleelvt.tvPTigfnveelei..knlk.ftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkal 107
                 +e++++++G  + GK+ +  +l + ++v+   PTi    ++  +  +++  + v D  Gqe+   + ++Y+++ ++ + v   + r+ ++e     +++
  KHJ34630.1   7 REYKLVVVGGGGVGKSCLTIQLIQSHFVDeYDPTIEDSYRKQCVidEEVAlLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFDEILVFQQQI 105
                 89****************99998888765389***987765333224554278999******************************************* PP

                 CTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHH CS
         Arf 108 leeeelkevallvlaNKqDlpealseeelrel 139
                 l+ ++    +++v++NK Dl+++ + +e + +
  KHJ34630.1 106 LRVKDKDYFPIIVVGNKCDLENDRQVSEAEGE 137
                 *********************99888876543 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.11   2.5e+02       6      27 ..      11      32 ..       7      54 .. 0.79
   2 !   21.2   0.0   7.7e-08   0.00017      66     143 ..      52     135 ..      23     174 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.11
                EEEEESTTSSHHHHHHHHHHHT CS
    GTP_EFTU  6 igiighvDhGKtTLtdrLlykt 27
                ++++g    GK++Lt +L++++
  KHJ34630.1 11 LVVVGGGGVGKSCLTIQLIQSH 32
                678899999******9999765 PP

  == domain 2  score: 21.2 bits;  conditional E-value: 7.7e-08
                 TCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETT.....TBSTHHHHHHHHHHHHTTTEEEEEEESCGST.HHHHHHHH CS
    GTP_EFTU  66 etkkylinliDtPGHvdFskevirglrvlDgavlvvdav.....eGvepqteevlrlalkegvpiivfiNKmDrl.kaelkeiv 143
                 +++  l+ ++Dt G +++s   ++ +r+ +g +lv +++     + + +  +++lr+  k   piiv+ NK+D   + +++e  
  KHJ34630.1  52 DEEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITsrqsfDEILVFQQQILRVKDKDYFPIIVVGNKCDLEnDRQVSEAE 135
                 466778999*****************************9655555699999999*******************98533333333 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.4   0.1   0.00041      0.92      96     122 ..       5      31 ..       2      46 .. 0.83
   2 !   10.5   0.0   0.00018      0.41      29      92 ..      94     160 ..      81     185 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00041
                  HCTTSEEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase  96 llkdktsvlvGqSGvGKStLinallpe 122
                   l++   v+vG  GvGKS L  +l+++
   KHJ34630.1   5 FLREYKLVVVGGGGVGKSCLTIQLIQS 31 
                  567777899***********9888764 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00018
                  T--HHHH.HHHHHHHHHTT-.EEEEEEE-GGG--HHH.HHHHHHHHHHHTTSEEEE--TTTHTTHHH CS
  RsgA_GTPase  29 elslnll.drfLvlaeekgi.epvivlnKiDlleeee.eleelkeelealgyevllvsaktkeglee 92 
                  ++++ l+ ++ ++ +++k+  ++++v nK+Dl ++++ +  e ++  +++g++++ +sak++ ++++
   KHJ34630.1  94 SFDEILVfQQQILRVKDKDYfPIIVVGNKCDLENDRQvSEAEGEALSRSFGCKFIETSAKSRINVDN 160
                  444444324455666666661555666**********444555667799**********98877664 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0     1e-06    0.0023       2     151 ..      10     160 ..       9     165 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 1e-06
                 EEEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEEEEEEETTEEEEEEE----SSSSSSSHHHHHHHHHHHCTS.SSEEEEEEEGGGHHHHHHHHH CS
      FeoB_N   2 tvalvGnpnvGkttlfnaltgakqkvgNwpGvtvekkegklklkgkeveivDlPGiYslsayseeekvardflleee.pdvvvnvvdatnlernLyLtl 99 
                 ++++vG   vGk+ l  +l +++  v  +   t+e +  k  + ++ev ++D+  +   ++ys    + ++++ + e + +v ++   ++++  L++  
  KHJ34630.1  10 KLVVVGGGGVGKSCLTIQLIQSH-FVDEYD-PTIEDSYRKQCVIDEEVALLDVLDTAGQEEYS---AMREQYMRTGEgFLLVYSITSRQSFDEILVFQQ 103
                 57899999999999999999875.588886.58888888888899999999985444444444...3456777765515556678888999******** PP

                 HHHHTT....SSEEEEEETHHHHHHTT.EEE-HHHHHHHHTS-EEEEBTTTTBTHHH CS
      FeoB_N 100 qllelg....vpvvlalnmideaekkg.ieidlkkLsekLgvpvvktsakkkegiee 151
                 q+l ++     p++++ n++d  ++++  e + ++Ls+++g++ ++tsak++ ++++
  KHJ34630.1 104 QILRVKdkdyFPIIVVGNKCDLENDRQvSEAEGEALSRSFGCKFIETSAKSRINVDN 160
                 ***99854445899999****877766267999******************999886 PP

>> MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   5.8e-06     0.013      51      95 ..     109     160 ..      89     171 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 5.8e-06
  MMR_HSR1_Xtn  51 gnrvYipclyvlNKiDl.....isleeldelare..pnsvviSaekelnlde 95 
                   +++ Y p ++v NK+Dl     +s++e ++l+r    + + +Sa++++n+d+
    KHJ34630.1 109 KDKDYFPIIVVGNKCDLendrqVSEAEGEALSRSfgCKFIETSAKSRINVDN 160
                   5679*************555555555555555546569999********996 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0     4e-06    0.0089       2     114 .]      11     122 ..      10     122 .. 0.67

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 4e-06
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETT..EEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETTTTCSHHHH...H CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkg..keielvDtpGliegaseekglgkaflaleeadlillvvdaseeklkpld...e 95 
                  ++vG   vGKS L  +l+++   v ++  t  d  +++  +++    + ++Dt+G  e   e   +++++ +  e  l+++ + ++ ++++++    +
  KHJ34630.1  11 LVVVGGGGVGKSCLTIQLIQS-HFVDEYDPTIEDSYRKQCVIDEevALLDVLDTAG-QE---EYSAMREQYMRTGEGFLLVYSITSR-QSFDEILvfqQ 103
                 689****************97.45777777777776666554443477999*****.55...4448999999988866666666644.33555431115 PP

                 HHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  96 eleelleeakkplilvlnk 114
                 ++ ++++++  p+i+v nk
  KHJ34630.1 104 QILRVKDKDYFPIIVVGNK 122
                 5555555555667777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 1595.84
//
Query:       KHJ34631.1  [L=255]
Description: putative molybdopterin binding domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-22   79.6   0.0    3.1e-22   78.8   0.0    1.4  1  MoCF_biosynth  Probable molybdopterin binding domain


Domain annotation for each model (and alignments):
>> MoCF_biosynth  Probable molybdopterin binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.8   0.0   1.7e-26   3.1e-22      23     140 ..       2     155 ..       1     160 [. 0.86

  Alignments for each domain:
  == domain 1  score: 78.8 bits;  conditional E-value: 1.7e-26
                    HHHHHTTSEEEEEEEEE-SSHHHHHHHHHHHHHTSSEEEEESS-SSSTT--HHHHHHHHHSEE-HHHHHHHHHHHHHHCC................ CS
  MoCF_biosynth  23 aellkelgvevskytvvpDdeeeikeallaaleeadviittGGtGptpdDvtpealaklfekelegfeeafrrvslkpgk................ 102
                    a+ +++lg+ ++k++v+pD e+ei+ea+++    +d+++t+GG+Gpt+dD+t++ +a +f  +l++++e+++r+++ ++                 
     KHJ34631.1   2 AKFCFRLGIVLKKIEVIPDHEKEIAEAVRRMSYMYDFVVTSGGIGPTHDDITYQSIASAFSLPLVLHNETVNRMRRLSKPhpsqasfswdtpspal 97 
                    78899***********************7774555******************************************877**************** PP

                    .........................TTSHGGGGGGE.EETTEEEEE-SSHHHHHHHHHHHHHG CS
  MoCF_biosynth 103 .........................pvgvapgailsravgktiigLPGspkavkealeeillp 140
                                             + + +p++ +    ++++ +LPG p+ +++ l+ +  p
     KHJ34631.1  98 taklrmatlpidsskpiehqviypcDDLWVPVCCI----NENVHILPGIPRLFERLLDGLQ-P 155
                    *9999999988888888876666663344444444....457**************99987.5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (255 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 1895.38
//
Query:       KHJ34632.1  [L=565]
Description: hypothetical protein EV44_g6505 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (565 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       998  (0.055664); expected 358.6 (0.02)
Passed bias filter:                      220  (0.0122706); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.72u 0.28s 00:00:01.00 Elapsed: 00:00:00.45
# Mc/sec: 3765.93
//
Query:       KHJ34633.1  [L=1187]
Description: putative pre-mrna-splicing factor atp-dependent rna helicase prp22 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      5e-22   78.2   0.1      5e-22   78.2   0.1    2.3  2  HA2            Helicase associated domain (HA2)
    3.7e-21   75.3   0.0      8e-21   74.2   0.0    1.6  1  OB_NTP_bind    Oligonucleotide/oligosaccharide-binding (OB)-f
    5.4e-14   52.5   0.0    1.3e-13   51.2   0.0    1.7  1  Helicase_C     Helicase conserved C-terminal domain
    1.8e-09   37.8   2.2    1.8e-09   37.8   2.2    1.8  1  S1             S1 RNA binding domain
    2.9e-06   27.2   0.2    6.6e-06   26.0   0.2    1.6  1  DEAD           DEAD/DEAH box helicase
    0.00012   22.3   0.1    0.00036   20.8   0.1    1.8  1  AAA_22         AAA domain
     0.0002   20.5   0.0    0.00046   19.3   0.0    1.6  1  T2SSE          Type II/IV secretion system protein
    0.00022   21.0   0.2     0.0006   19.6   0.1    1.8  2  AAA_30         AAA domain
      0.001   19.5   0.2     0.0021   18.4   0.2    1.5  1  AAA_19         AAA domain
     0.0049   16.2   0.0       0.01   15.1   0.0    1.5  1  DUF2075        Uncharacterized conserved protein (DUF2075)
  ------ inclusion threshold ------
       0.03   14.8   0.2        2.9    8.4   0.0    3.5  3  ABC_tran       ABC transporter
      0.041   13.5   0.1      0.088   12.4   0.1    1.6  1  SRP54          SRP54-type protein, GTPase domain
      0.083   12.9   0.2       0.62   10.1   0.2    2.2  1  AAA_14         AAA domain
      0.096   12.5   0.0       0.24   11.2   0.0    1.7  1  Helicase_RecD  Helicase


Domain annotation for each model (and alignments):
>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.3       8.5   1.1e+04      81      81 ..     175     175 ..     132     207 .. 0.51
   2 !   78.2   0.1   3.9e-25     5e-22       1     108 []     915    1003 ..     915    1003 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 8.5
         HA2  81 k 81 
                 +
  KHJ34633.1 175 N 175
                 1 PP

  == domain 2  score: 78.2 bits;  conditional E-value: 3.9e-25
         HA2    1 AlelLvalgALdeegnlTelGrkmaelPlsprlakmLlaaaeleegcldevitivAalsveeifleeneeekeeeeeeeekakkkrkeeekarrkla 97  
                  Ale L+al+ALd+eg lT lGrkma++P++p++ak+ +aa++l  gc +ev++ivA+ls   +f +++e++ +       ++kk+++ ++       
  KHJ34633.1  915 ALEELYALSALDDEGLLTRLGRKMADFPMDPSMAKVVIAAVDL--GCCEEVLSIVAMLSLPTVFYRPKEKQTQA------DQKKAKFHDN------- 996 
                  899*************************************777..**************999999999755332......2333334444....... PP

         HA2   98 hkdaegDhltl 108 
                      +gDhltl
  KHJ34633.1  997 ----HGDHLTL 1003
                  ....4999997 PP

>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.2   0.0   6.2e-24     8e-21       1      82 [.    1061    1137 ..    1061    1138 .. 0.96

  Alignments for each domain:
  == domain 1  score: 74.2 bits;  conditional E-value: 6.2e-24
                   HHHHHHHHHTTCEEEEEETTCCEEETTTCEEEEE-TTSTTTTT...TSSSEEEEEEEEESSSEEEEEEEEE-HHHHHHHSTT CS
  OB_NTP_bind    1 lraillaGlypqiarkdpskkdyktartktrvfihpsSvlaknekekepewvvytelvettklylrdltaidpawLllfagq 82  
                   +r++ ++G++ + arkdp++  ykt+ ++t+v++hpsS+l+     k+ ewv+y++lv t+k y++ +t i+p wL++ a++
   KHJ34633.1 1061 VRQAFCSGYFRNSARKDPQEG-YKTLIEGTPVYLHPSSALFG----KQVEWVIYHTLVLTSKEYMHCTTSIEPKWLVEAAPS 1137
                   69****************998.****99*************8....*******************************99875 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.2   0.0     1e-16   1.3e-13       8     111 .]     724     853 ..     714     853 .. 0.88

  Alignments for each domain:
  == domain 1  score: 51.2 bits;  conditional E-value: 1e-16
                 HHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHT........TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSH CS
  Helicase_C   8 ellkleeeggkilifvntidrlek.vklllekk........gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnv 97 
                 ++ +l+e  g+il+f++ +++++  +++l e+         ++ ++++++ lp++ + +i+e    g+++v+iat++ae++i+i+ + +Vi+ ++ ++ 
  KHJ34633.1 724 QI-HLTEPPGDILLFLTGQEEIDTsCEILFERMkalgsgvpELIILPVYSALPSEMQSKIFEPAPPGSRKVVIATNIAETSITIDHIYYVIDPGFVKQN 821
                 33.68999************9999988885555678888999*****************************************************9443 PP

                 ..................HHHHHHHTTSSSTT CS
  Helicase_C  98 ..................tsyiqriGRtgRag 111
                                   ++++qr+GR+gR g
  KHJ34633.1 822 aydpklgmdslvvtpisqAQAKQRAGRAGRTG 853
                 367799999999******************86 PP

>> S1  S1 RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.8   2.2   1.4e-12   1.8e-09       3      74 ..     218     290 ..     216     291 .. 0.90

  Alignments for each domain:
  == domain 1  score: 37.8 bits;  conditional E-value: 1.4e-12
                 TTTCEEEEEEEEEETTEEEEEET...TTEEEEEEGGGSSSSCEESCHHHCEETTEEEEEEEEEEETTTTEEEEEE CS
          S1   3 ekgevveGeVtsvtkgGafVelg...ngvegfvpaselsrdarvedpdevlkvGdevkvkvlkvdkdrrriilsi 74 
                 ++ ++++G Vt v ++G fV++    ++v+g+v++s l    rv++p++ l+ G++vkvkv kv+ +  ri ls+
  KHJ34633.1 218 KEFKIYDGHVTGVKDFGCFVNIHgvkGKVDGLVHVSALVEGQRVSHPSDLLSRGQQVKVKVVKVEGT--RIGLSM 290
                 55579*****************98999************999**********************988..455555 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.2   5.2e-09   6.6e-06       5     171 ..     530     680 ..     526     685 .. 0.77

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 5.2e-09
                 HHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   5 aeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdivvg 103
                 +e i+++ +++ ++v ++TGsGKT+     + ++ +     +  ++ +  P r  a  +++++ +    ++l +++ ++  + +d  s +   ++i ++
  KHJ34633.1 530 SELIKAVHENQLLIVVGDTGSGKTTQLTQYLAEAGF----ANDCMIGCTQPRRVAAMSVAKRVAEEVG-CQLGEEVGYT-IRFEDVTSSV---TKIKYM 619
                 78899999*****************98877776664....57778889************99988777.4444543333.3345555555...9***** PP

                 EHHHHHH.HHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSH CS
                 xxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 104 tpgrldd.llstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpk 171
                 t g+l++ +l +    l++ +++ lDEa++       d + ++l+++ +   d  l+  vi+ SATl  
  KHJ34633.1 620 TDGMLQReILMDPD--LKRYSVIMLDEAHERTIA--TDVLFALLKKTIKRRPD--LK--VIITSATLDA 680
                 *******5555555..*************99887..77777777777444444..44..********83 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.1   2.8e-07   0.00036       4     115 ..     538     662 ..     535     682 .. 0.73

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 2.8e-07
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka.............erlsseell.ealeqalra 88 
                 + ++l+v+G +G+GKTt l ++l ++        +++  + +t p      ++++++++++g +l +             +  + + +   +l++ +  
  KHJ34633.1 538 ENQLLIVVGDTGSGKTTQLTQYLAEAGF------ANDCMIGCTQPRRVAAMSVAKRVAEEVGCQLGEevgytirfedvtsSVTKIKYMTdGMLQREILM 630
                 5689*********************843......58888888888888999999999999998888888989999765544444444444555555555 PP

      AAA_22  89 rav...ielliiDEaqhlr..seealeeLrsl 115
                   +    +++++DEa+  +  ++ ++  L++ 
  KHJ34633.1 631 DPDlkrYSVIMLDEAHERTiaTDVLFALLKKT 662
                 54499999********9533456666666443 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   3.6e-07   0.00046     116     160 ..     526     570 ..     432     586 .. 0.79

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 3.6e-07
       T2SSE 116 ekiaevlrkavrerglilvsGgTgsGKttllyallkeinksderi 160
                  ++++ l kav+e++l++v G TgsGKtt l   l+e    ++++
  KHJ34633.1 526 YRFRSELIKAVHENQLLIVVGDTGSGKTTQLTQYLAEAGFANDCM 570
                 4567779999*********************99999876665555 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       6.8   8.8e+03      53      79 ..      11      37 ..       7      49 .. 0.78
   2 !   19.6   0.1   4.7e-07    0.0006      11     114 ..     534     664 ..     529     674 .. 0.70

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 6.8
      AAA_30 53 AptgkaAkvLaeelgieastiakllkr 79
                +  +k+  +L+++lgi  +t+a+++ +
  KHJ34633.1 11 SLVSKVTSELQNHLGISDKTLAEFVIA 37
                566788899999999999999999855 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 4.7e-07
      AAA_30  11 ealltsgdrvavltGpAGtGKttalkal.reaweaag........grviglAptgkaAkvLaeelg......i....eastiakllkrlk......... 81 
                 +a+++  +++ +++G  G+GKtt l+++ +ea  a+         +rv++++  +++A++++ +lg      i     +s++ k+    k         
  KHJ34633.1 534 KAVHE--NQLLIVVGDTGSGKTTQLTQYlAEAGFANDcmigctqpRRVAAMSVAKRVAEEVGCQLGeevgytIrfedVTSSVTKI----Kymtdgmlqr 626
                 44443..459**************9998666666666899*******************99955553322432333344444444....3455599999 PP

      AAA_30  82 ....grarlepgtllivDEag..mvdtkqlaallkaaek 114
                     +  +l++ ++++ DEa    ++t+ l allk+  k
  KHJ34633.1 627 eilmD-PDLKRYSVIMLDEAHerTIATDVLFALLKKTIK 664
                 99963.578999*******96224577888887776654 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.2   1.7e-06    0.0021       4     129 ..     535     666 ..     530     673 .. 0.66

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 1.7e-06
      AAA_19   4 avealkekvllvtaGpGtGKTrvlkhivallvelggvkp.....eeillvaftgrAakelrerlaalgae.atTiH..rlalldfddlltealelle.e 93 
                 a   +++++l+v++  G+GKT+ l++ +a++  +++        ++++++++++r a+e+  +l   g+e  +Ti    + +  +++++ ++ ++l+ e
  KHJ34633.1 535 A--VHENQLLIVVGDTGSGKTTQLTQYLAEAGFANDCMIgctqpRRVAAMSVAKRVAEEVGCQL---GEEvGYTIRfeDV-TSSVTKIKYMTDGMLQrE 627
                 3..58999*****************999988766654323333388888888888888888777...4445566652122.233444444555555566 PP

      AAA_19  94 aeeekklqeeellivDEfqd..vd.elqyrLlkallgek 129
                    + +l++  +++ DE+ +  +  ++ ++Llk+  +++
  KHJ34633.1 628 ILMDPDLKRYSVIMLDEAHErtIAtDVLFALLKKTIKRR 666
                 66788995555******9872244567777777776555 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0     8e-06      0.01       2      99 ..     540     647 ..     539     673 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 8e-06
     DUF2075   2 avvlVtGvaGtGKtvvllnllael.......eddeeertavylsvNhplvlvlrealakkeekkkkkeafeklssfinnlsef...kkaeekkeepked 90 
                 ++++V G++G+GKt  l + lae+           + r+++ +sv ++  + +  +l ++   + + e+++ + + i+ ++ +   ++   + + ++  
  KHJ34633.1 540 QLLIVVGDTGSGKTTQLTQYLAEAgfandcmIGCTQPRRVAAMSVAKRVAEEVGCQLGEEVGYTIRFEDVTSSVTKIKYMTDGmlqREILMDPDLKRYS 638
                 6899********************887776666669999*************99999998844444455555555555555558867777888999*** PP

     DUF2075  91 vvivDEAhr 99 
                 v+  DEAh 
  KHJ34633.1 639 VIMLDEAHE 647
                 ********5 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.59   7.5e+02      97     120 ..     256     279 ..     162     282 .. 0.70
   2 ?    8.4   0.0    0.0023       2.9       8      28 ..     536     556 ..     531     563 .. 0.87
   3 ?    0.5   0.0      0.64   8.2e+02     104     135 ..     614     645 ..     583     647 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.59
                 TTCBGESTTSGGS-HHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  97 lkdtvvksspssLSgGqkqrvala 120
                 ++ ++v++    LS Gq+++v+++
  KHJ34633.1 256 VEGQRVSHPSDLLSRGQQVKVKVV 279
                 3477776666999*******9876 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0023
                 EETTSEEEEEESTTSSHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   8 lkegekvaivGenGaGKStLl 28 
                 ++e++++ +vG++G+GK+t l
  KHJ34633.1 536 VHENQLLIVVGDTGSGKTTQL 556
                 78999*************965 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.64
                 TTSGGS-HHHHHHHHHHHHHHHTSSEEEEEST CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 104 sspssLSgGqkqrvalarallkkpkllllDEp 135
                 ++ + +  G+ qr  l+   lk+ ++++lDE+
  KHJ34633.1 614 TKIKYMTDGMLQREILMDPDLKRYSVIMLDEA 645
                 2448999************************8 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   6.8e-05     0.088       3      60 ..     541     597 ..     539     684 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 6.8e-05
                 EEEEEESTTSSHHHHHHHHHHHHHHT..TS-EEEEEESTSSTTHHHHHHHHHHHTTEEEE CS
       SRP54   3 villvGlqGaGKTttlaKLaallkke..gkkvllvaaDtfRaaAveQLktlaeklgvpvi 60 
                 ++++vG +G+GKTt l+   ++l +   ++++++ ++   R+aA+   k +ae++g ++ 
  KHJ34633.1 541 LLIVVGDTGSGKTTQLT---QYLAEAgfANDCMIGCTQPRRVAAMSVAKRVAEEVGCQLG 597
                 6789**********865...566666567899*******************999997754 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.2   0.00049      0.62       2     100 ..     539     676 ..     538     682 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00049
      AAA_14   2 rkilvitGaRrvGKTtllkqlikell.........vkkesilyinldderd.................kkladpekllelilek.lke........... 62 
                 +++l+++G   +GKTt l q++ e           ++++++  +++ +                    +      ++ + + +  +++           
  KHJ34633.1 539 NQLLIVVGDTGSGKTTQLTQYLAEAGfandcmigcTQPRRVAAMSVAKRVAeevgcqlgeevgytirfE------DVTSSVTKIkYMTdgmlqreilmd 631
                 678899999999999999999988887778888877777777777777555667777776666443330......222222222211133444455566 PP

      AAA_14  63 ...ekktylflDEiqev....pewekalkslvdegknldvivtGS 100
                    ++ ++++lDE++e     + ++  lk+ ++++++l+vi+t  
  KHJ34633.1 632 pdlKRYSVIMLDEAHERtiatDVLFALLKKTIKRRPDLKVIITSA 676
                 77778888*******994444445555666666779999999975 PP

>> Helicase_RecD  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00019      0.24       2     110 ..     544     658 ..     543     677 .. 0.70

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00019
  Helicase_RecD   2 ltAdRGRGKSaalGlalaaliaegksnilvtapskenvktlfeflakglealglkeeekkkkaekaelrvrkqrieyiapdellklkeqa...... 91 
                    + +d G GK++ l   la++  ++++ i +t p++ ++ ++ +++a+++   +l ee   + +    ++++ ++i+y++   l+++          
     KHJ34633.1 544 VVGDTGSGKTTQLTQYLAEAGFANDCMIGCTQPRRVAAMSVAKRVAEEVGC-QLGEEVGYTIRF-EDVTSSVTKIKYMTDGMLQREILMDpdlkry 637
                    67899*********************************9999999877753.333333333333.4455667777777766666654322445555 PP

  Helicase_RecD  92 dllvvDEAA..aiplpllkkl 110
                     +++ DEA    i +++l +l
     KHJ34633.1 638 SVIMLDEAHerTIATDVLFAL 658
                    778888885224555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       918  (0.051202); expected 358.6 (0.02)
Passed bias filter:                      564  (0.0314574); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 0.91u 0.29s 00:00:01.20 Elapsed: 00:00:00.47
# Mc/sec: 7671.24
//
Query:       KHJ34634.1  [L=1021]
Description: hypothetical protein EV44_g3096 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-22   80.7   0.0    2.2e-22   79.9   0.0    1.4  1  RVT_2            Reverse transcriptase (RNA-dependent DNA pol
    1.4e-14   54.3   0.2    1.6e-10   41.2   0.0    2.5  2  rve              Integrase core domain
    9.7e-10   38.2   0.0    2.3e-09   37.0   0.0    1.7  1  gag_pre-integrs  GAG-pre-integrase domain
    2.7e-09   36.8   0.0    6.5e-09   35.6   0.0    1.7  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type
    1.1e-05   25.2   0.0    2.8e-05   23.8   0.0    1.7  1  rve_3            Integrase core domain
     0.0047   16.6   1.9     0.0098   15.6   1.9    1.5  1  zf-C2H2_10       C2H2 zinc-finger
  ------ inclusion threshold ------
      0.021   14.9   2.6      0.055   13.6   2.6    1.7  1  zf-CCHC          Zinc knuckle
      0.024   14.7   0.0      0.062   13.3   0.0    1.7  1  Toxin_YhaV       Toxin with endonuclease activity, of toxin-a


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.9   0.0   9.7e-26   2.2e-22     111     236 ..     685     813 ..     676     819 .. 0.91

  Alignments for each domain:
  == domain 1  score: 79.9 bits;  conditional E-value: 9.7e-26
       RVT_2 111 kvykLnkslyGlkqapllWnekidkvLk.klgferseaesGlyvrgtgegklivalyvddlliagsdikiledvkkelakkfklkdlgkvskfLGieia 208
                  v++L ++lyGlkq+++ W ++++k+L  + ++ + + + Gl+ r ++eg  i+a++vddl+i+++d++ l++   e++kk++  d g+ +  LGi++ 
  KHJ34634.1 685 PVCRLLHTLYGLKQSGREWINTLKKFLVeEAKYLQLPKQYGLFYRHESEGYGIIAVWVDDLFIVSTDSTRLNRTEDEIKKKWEATDQGEPKLLLGIHME 783
                 59***********************9972579*****************************************************************98 PP

       RVT_2 209 q..eaggiklsladyiakvvkkfeltdakt 236
                 +  e++ ik+ +++y a+v++   l  a+ 
  KHJ34634.1 784 KdkETNSIKIHQEQYFARVLSIGSLMFAYI 813
                 76689**************98777766655 PP

>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.1   0.00016      0.36       5      39 ..     582     618 ..     578     624 .. 0.88
   2 !   41.2   0.0   7.3e-14   1.6e-10      67     117 ..     625     673 ..     618     674 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00016
         rve   5 gelwqvDvt...vvripdgggkayllvvvddfsrlila 39 
                 g+l ++Dv+   +vr  + gg+ y++ ++dd++r+i++
  KHJ34634.1 582 GDLTHTDVWgspHVR-QTPGGNQYFILFIDDYTRFITV 618
                 78999****999999.89999**************987 PP

  == domain 2  score: 41.2 bits;  conditional E-value: 7.3e-14
         rve  67 pervlsDngseytskafrefladlgirvsftrpgrpqdnGkvErfhrtlkd 117
                 p++++ Dn+ ey    +r +l+++gi++++++p++pq+nG+ Er++rtl d
  KHJ34634.1 625 PKEIKADNAAEYE--GIRSWLKKYGIELRTSAPYSPQQNGVSERMNRTLLD 673
                 899**********..9********************************965 PP

>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   0.0     1e-12   2.3e-09       1      67 []     490     565 ..     490     565 .. 0.82

  Alignments for each domain:
  == domain 1  score: 37.0 bits;  conditional E-value: 1e-12
  gag_pre-integrs   1 gLYlldlssn.anssvs..lsknkssinlWHrRLGHpsfsrlkkLfkkgllpglkiskse......vCeaCqlgKq 67 
                      +LY++d + + +n+ ++  +s+n+ s n  HrRLGH+s  +lk Lfk+++++g+ki+++e        e+C+ +K+
       KHJ34634.1 490 NLYKIDVKAIiKNEDMAnlVSTNVLSWNETHRRLGHISLTSLKMLFKRDHVDGIKIDEDEpipkelSSESCIAAKS 565
                      7999999955244445444999*********************************9774445555599****9996 PP

>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.0   2.9e-12   6.5e-09      53     135 ..     205     288 ..     185     291 .. 0.95

  Alignments for each domain:
  == domain 1  score: 35.6 bits;  conditional E-value: 2.9e-12
  Retrotran_gag_2  53 rkklfslkmkegesvadhinkleelvneLsalgvkiddedkvvllLasLPesyetfvtaies.seedltleevieklleeeerr 135
                      ++++ s++++eg sv+ h+ +++ l  eL++lg +i+  ++++ l +sLP+sy+ ++++i + + +++ + ++  k+ eee+ r
       KHJ34634.1 205 SQRFWSMRCEEGASVRLHVGEVRALHLELAELGITIERYLLAIVLYKSLPPSYDGLISTIFAtDLDNVDPGYIARKIFEEEMCR 288
                      699***********************************************************9*****************9976 PP

>> rve_3  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0   1.2e-08   2.8e-05       2      37 ..     647     682 ..     646     690 .. 0.86

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 1.2e-08
       rve_3   2 gielsyiapgkPqqNglvEsfngtlrdellneelfr 37 
                 giel+ +ap++PqqNg  E++n+tl d +   ++ +
  KHJ34634.1 647 GIELRTSAPYSPQQNGVSERMNRTLLDLARAIRIEK 682
                 89***********************99877666655 PP

>> zf-C2H2_10  C2H2 zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   1.9   4.4e-06    0.0098       3      22 ..     300     319 ..     299     319 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 4.4e-06
  zf-C2H2_10   3 kitCSYChetGHtRAkCekR 22 
                 +i+C  Che+GH  A C+ +
  KHJ34634.1 300 NIKCQNCHEIGHLKADCYSK 319
                 8****************976 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   2.6   2.5e-05     0.055       1      16 [.     301     316 ..     301     317 .. 0.96

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.5e-05
                 SCTSSSSSSSSTTTTS CS
     zf-CCHC   1 rkCynCGepGHiardC 16 
                 +kC nC e+GH++ dC
  KHJ34634.1 301 IKCQNCHEIGHLKADC 316
                 59************** PP

>> Toxin_YhaV  Toxin with endonuclease activity, of toxin-antitoxin system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.8e-05     0.062      70     100 ..     714     744 ..     702     755 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.8e-05
  Toxin_YhaV  70 hwkrakllqryRLFFRydseskiivlaWvnd 100
                 + k ++l+++y LF+R +se   i+ +Wv+d
  KHJ34634.1 714 EAKYLQLPKQYGLFYRHESEGYGIIAVWVDD 744
                 55667899*********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1021 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      540  (0.0301188); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.79u 0.28s 00:00:01.07 Elapsed: 00:00:00.47
# Mc/sec: 6588.70
//
Query:       KHJ34635.1  [L=676]
Description: putative fungal specific transcription factor domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.8e-16   57.9   0.0    1.7e-15   56.8   0.0    1.6  1  Fungal_trans  Fungal specific transcription factor domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.8   0.0   9.7e-20   1.7e-15      12     265 ..     102     336 ..      91     338 .. 0.75

  Alignments for each domain:
  == domain 1  score: 56.8 bits;  conditional E-value: 9.7e-20
  Fungal_trans  12 f..pilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsLlllelyekt 106
                   +  p lh+ps+ ++  +  +++s+ ++++++  +l++  + ++s+++               ++l+a  ++ e+   p ++l +lq+L+l++ y++ 
    KHJ34635.1 102 YltPTLHEPSLKRDILDVYDGSSDPYQNFVVRIVLSISLQKLDSAYAGL------AD----SYYLAAIEFL-EEVIRP-KDLKTLQCLVLVAQYSLL 186
                   45699**********9999*****************************7......22....4568999999.555555.55**************** PP

  Fungal_trans 107 ssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrpp.l.lddsqinlpLPcddddlwesddasee 201
                   + ++++ ++++g+a r++++lgL +++   ++ sl  +++ +   rrRl+w + +++  +a  +Grp+ +    ++i + +++  dd  ++++    
    KHJ34635.1 187 TPTQTAIYYIIGLATRICQQLGLTEEKTIAQDVSLGPVDPIQLDLRRRLAWIVLSMEYGLAHSMGRPNsFaPGQDEIGIKFFEPKDDKYITSEGILP 283
                   *******************************99966666666*************************963355666666655555533333333333 PP

  Fungal_trans 202 tlvetklsneeksrkiasfllaLkkilskiagsllsiekqlqqrdlqseklswveeleraldnW 265
                     ++         +  a  +l++  ++++i ++l+  + +   ++++    +w  e++ +++nW
    KHJ34635.1 284 GPIS-------EKKVVAIHFLRMRLLQAEIRRKLYQMKRPEPKNENH----PWYAEIQQKMKNW 336
                   3333.......223334444455555555555555555555555555....5555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4731.40
//
Query:       KHJ34636.1  [L=603]
Description: putative zn2 cys6 dna-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-14   53.7   5.2    2.9e-14   52.7   5.2    1.4  1  Fungal_trans  Fungal specific transcription factor domain
    3.9e-08   33.3  10.4    7.8e-08   32.3  10.4    1.5  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.7   5.2   3.2e-18   2.9e-14       2     241 ..     190     410 ..     189     435 .. 0.79

  Alignments for each domain:
  == domain 1  score: 52.7 bits;  conditional E-value: 3.2e-18
  Fungal_trans   2 drffsnfhpqfpilhkpsflpkt...ssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilq 95 
                   d + +n+ + fpi++++ +l+     +++n     ++ + l+++ la+ + +++ ++       ++     i  ++r++  + +   +p + +  +q
    KHJ34636.1 190 DYYIDNILCFFPIFDEEILLNVLesiYQHNLQLVSESGHWLFYMTLAISSISQSRNYTDR--FYKDA---VI--CIRKALSFADRVLVPGC-VSQIQ 278
                   67888888999*****88888774445555555555666666666666665555555554..33332...34..7799999999999999*.***** PP

  Fungal_trans  96 sLlllelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcddddl 192
                   +L+ll  y++        + + g+++r  ++lg+h++p+  ++      + +  e rr l++++++lD+ +++++ r + + d+++++ +P   +  
    KHJ34636.1 279 ALVLLVQYSMLDPAHFDSWILTGITCRAIVDLGFHQDPPKDEP-----TDQKSLELRRTLFYSIYSLDRSVSMVHARSFSFTDDSTSVTFPSIKN-- 368
                   ******************************************8.....88888**************************99**********9999.. PP

  Fungal_trans 193 wesddaseetlvetklsneeksrkiasfllaLkkilskiagsllsiekq 241
                    e + ++++ +++      +k +  +s l++L ki+s+ +++l+  +++
    KHJ34636.1 369 -EKLPVDTKLKLG------RKFKIQSSLLFKLRKIQSSWYHELFQSKND 410
                   .555555555555......5789999************99988766554 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.3  10.4   8.6e-12   7.8e-08       2      31 ..      22      53 ..      21      59 .. 0.91

  Alignments for each domain:
  == domain 1  score: 32.3 bits;  conditional E-value: 8.6e-12
                S-HHHHHCT---STSSSS-HHHHHCT..HHHC CS
     Zn_clus  2 aCdnCrkkKvKCdakkPaCsnCkkln..leCt 31
                aC +Cr+ K+KCd+k PaCs C+k +  + C 
  KHJ34636.1 22 ACSRCRRAKIKCDGKLPACSACEKAGyaKSCA 53
                9*************************888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (603 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 4520.38
//
Query:       KHJ34637.1  [L=74]
Description: hypothetical protein EV44_g1742 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       251  (0.0139997); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.23s 00:00:00.55 Elapsed: 00:00:00.35
# Mc/sec: 635.24
//
Query:       KHJ34638.1  [L=415]
Description: hypothetical protein EV44_g2854 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.2e-15   55.5   0.0    1.1e-14   54.5   0.0    1.6  1  Ribosomal_L50  Ribosomal subunit 39S


Domain annotation for each model (and alignments):
>> Ribosomal_L50  Ribosomal subunit 39S
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.0   6.1e-19   1.1e-14      25     109 ..     293     380 ..     269     381 .. 0.85

  Alignments for each domain:
  == domain 1  score: 54.5 bits;  conditional E-value: 6.1e-19
  Ribosomal_L50  25 a.........kdegflqlsLeDlelKFaflkrlqqllgheipDykltklhtvkdlveyleevvnpkpkklaerlpnaielrsedfklpNVkine 109
                               d ++++++  D e+KF f+kr+ ql+g++++D ++t+ +tv  l++ +  +  pk  klae l++++el+     lpNV+i++
     KHJ34638.1 293 LinyqelvasWDPSWMNIPIIDAEIKFTFFKRILQLTGIHVSDAIITSTTTVGGLLKQI--IKPPKNRKLAEVLAEKEELSM----LPNVSIHP 380
                    14444455556899*********************************************..999******************....******97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.18s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 3313.12
//
Query:       KHJ34639.1  [L=92]
Description: hypothetical protein EV44_g1882 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.035   13.7   1.7      0.054   13.2   1.7    1.3  1  G2BR           E3 gp78 Ube2g2-binding region (G2BR)
        2.4    7.8   6.7        5.9    6.5   4.6    2.2  2  Phage_fiber_2  Phage tail fibre repeat


Domain annotation for each model (and alignments):
>> G2BR  E3 gp78 Ube2g2-binding region (G2BR)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   1.7     6e-06     0.054       2      12 ..      78      88 ..      77      91 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 6e-06
        G2BR  2 AdERQRMLvqR 12
                A+ERQR L++R
  KHJ34639.1 78 AEERQRLLLLR 88
                9*********9 PP

>> Phage_fiber_2  Phage tail fibre repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   4.6   0.00066       5.9       8      21 ..      11      24 ..       7      25 .. 0.86
   2 ?    0.9   0.0     0.038   3.4e+02       1      11 [.      52      62 ..      52      66 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.00066
  Phage_fiber_2  8 vqLssatdStsetl 21
                   +++ss+++Sts+t+
     KHJ34639.1 11 TTRSSSVNSTSSTN 24
                   899*********96 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.038
  Phage_fiber_2  1 tltqkGivqLs 11
                   +++  G+ qL+
     KHJ34639.1 52 STCSGGFLQLT 62
                   78999*****8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       489  (0.0272742); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 730.81
//
Query:       KHJ34640.1  [L=429]
Description: putative rna binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.7e-34  117.1   0.0    1.4e-33  116.4   0.0    1.3  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso
    6.2e-15   54.8   0.0    1.2e-14   53.9   0.0    1.5  1  RRM_1          RNA recognition motif. (a.k.a. RRM, RBD, or RN


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.4   0.0   1.6e-37   1.4e-33       2     156 ..       3     169 ..       2     171 .. 0.87

  Alignments for each domain:
  == domain 1  score: 116.4 bits;  conditional E-value: 1.6e-37
  Pro_isomerase   2 vdietsskGrivieLfadkaPktvenFlklvkegfYdgttFhRvikgfmvqgGdptgktsageqekkggesi.........raipdEitsklkh.k 87 
                    v +ets  G+ivi+L+ d+aPk +enFlkl+k ++Y+ + ++R+ k+f  q+Gdp g +sa+   ++gg si         r+++ ++++klkh +
     KHJ34640.1   3 VLLETS-VGDIVIDLKVDEAPKLCENFLKLCKIKYYNFSPIYRIQKDFSFQTGDPIGPDSAE---SDGGSSIwgvidgpakRTFKVDFNPKLKHiE 94 
                    568996.**************************************************98822...23444445566677779*******9****9* PP

  Pro_isomerase  88 rGalamartg....kepnsagsqFfItlke.aphldgkytvFGkVveGmdvvekiekvetde.erpkknvkivsa 156
                    +G+++ma +     +++  agsqF Itl++  ++ldgk ++FG+V e  d++eki+++  de  rp  +++i+++
     KHJ34640.1  95 KGTVSMATAVspkdPDERVAGSQFIITLGNnLDFLDGKGAIFGTVAEASDTLEKINNAFCDEkGRPLVDIRIKHT 169
                    *******9988966677789********76157************************8888888********975 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.0   1.3e-18   1.2e-14       1      70 []     250     320 ..     250     320 .. 0.98

  Alignments for each domain:
  == domain 1  score: 53.9 bits;  conditional E-value: 1.3e-18
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 lfV  L+p +t+e+L+ +Fs fG i s+++++d +t+ s  +af+eFe + + e+A  +++g  +++++++
  KHJ34640.1 250 LFVCKLNPVTTDEDLELIFSRFGVILSCEVIKDrRTNDSLQYAFIEFEEQASCEQAYFKMQGVLIDDHRIH 320
                 7999***************************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       692  (0.0385967); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.21s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 3383.04
//
Query:       KHJ34641.1  [L=513]
Description: putative s-adenosylmethionine decarboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   5.4e-128  426.9   0.0   9.3e-128  426.2   0.0    1.4  1  SAM_decarbox  Adenosylmethionine decarboxylase


Domain annotation for each model (and alignments):
>> SAM_decarbox  Adenosylmethionine decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  426.2   0.0  5.2e-132  9.3e-128       2     355 .]      35     507 ..      34     507 .. 0.89

  Alignments for each domain:
  == domain 1  score: 426.2 bits;  conditional E-value: 5.2e-132
                   ----SSEEEEEEEEEE-TTS-TT.....GGGGS-HHHHHHHHHHTT-EEEEEEE-SSEEEEEEE-XXEEEESSEEEEEEETTSXGGGGHHHHHHHHH CS
  SAM_decarbox   2 eaFEGpEKlLeiwfaeseeelekskkeegLrsisrekweeiLdlvkCkilsvvsseevdaYlLSeSSlFvfphkliLkTCGtttlLlclekllelae 98 
                   + FEGpEKlLe+wfa+ +++l++  ke+gL+s++ + wee+L+lv+Ckilsv++s++vdaYlLSeSS+FvfphkliLkTCGtttlL++l+++l++a 
    KHJ34641.1  35 SCFEGPEKLLEVWFAPAPDALPHGVKENGLKSVNLQAWEEMLNLVNCKILSVIESKNVDAYLLSESSMFVFPHKLILKTCGTTTLLFGLSRILNIAV 131
                   57**********************************************************************************************7 PP

                   HTTE..............EEEEEEEEEESSSSGGGXXGGGCSHHHHHHHHHHHXTTXEEEEESETTSSEEEEEEE.............E........ CS
  SAM_decarbox  99 eelg............aaevekvfYsrksFlfpekQksphrsfkeEvklLdklfengkayvvgkmnsdhwylYvaeeekeeeeeeakke........ 175
                    e+g             a +++vfYsrk+Flfp+kQ++phr +++Ev++Ld++fe g+ay+vgk+n+dhwylY++ ++++  +++++++        
    KHJ34641.1 132 IEVGfpqsernatgesCAIPYRVFYSRKKFLFPDKQQGPHRCWENEVEYLDNIFEGGSAYMVGKVNGDHWYLYLTLPNTSILTSSTTEDssrnkslk 228
                   7777777777777888899********************************************************999988887777668999**** PP

                   ........SSXXX.XXXEEEEEEEESXXHHHHGGGBXSSXE........................................................ CS
  SAM_decarbox 176 ........eeeseeeedetleilMteLdpekakkFvkerks..........kee........................................... 211
                            ++++e++detleilMt+Ld+e+akkF+ ++++          + +                                           
    KHJ34641.1 229 vnynsfcpGSQEKENHDETLEILMTDLDQENAKKFYVDHANkvlasnisadA-Kpkwhnmldnmegfhgsmksskqlnrikirmpkdeekhsyilsa 324
                   *******9889999**********************9998877776666550.05566666666777777777888888888888999999999999 PP

                   ......................HHHHHHHHHSHHHHSX.....TSEEEEEEXSSBXEEEEEEETT......EEEEEEEEXXSTTXEEEEEEXXXX.. CS
  SAM_decarbox 212 ................edeghalgkevteksgldkilp.....eaeidafaFepcGYSaNaivee.....eayyTiHvTPeegfSYaSFEtnvplke 282
                                    ++g alg+ vte +gl +++p     +a +d+++F+pcG S+N++ ++     ++y+T+HvTPe+++SYaSFE+nvp++ 
    KHJ34641.1 325 qsgfltppketsdeaeITQGRALGAIVTEMCGLLDVFPsseypNACVDSHLFSPCGLSVNGLIPSindatAYYFTVHVTPEPHCSYASFESNVPTRL 421
                   9999999999999999999*******************9999999*****************999999999************************** PP

                   ..SXXHHHHHHHHHHHXXSEEEEEEEEXT.............TS........HHHHHTTXXXSTEEEEEEEEEEEETEEEEEEEEE CS
  SAM_decarbox 283 eskslkelikkvlkiFkPgkfsvtlfaek.............eseeeekvlkeleasklkklkgykrkdrivyelegyklvylsfe 355
                   +++++ +++k+v++iFkPg+fsvtlf+ek             + + ++++ ++ + s+l+k++gy+rkdri++++egy+lv+ s+e
    KHJ34641.1 422 QGRDTVDVVKQVVEIFKPGHFSVTLFEEKkdsigevkkcninQGDVTDNSYNKNKYSNLDKITGYNRKDRIIHQFEGYNLVFCSYE 507
                   ****************************96655555444432111222222222222555566********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (513 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       658  (0.0367003); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.21s 00:00:00.75 Elapsed: 00:00:00.37
# Mc/sec: 4122.77
//
Query:       KHJ34642.1  [L=224]
Description: putative meiotic recombination protein dmc1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-48  165.3   0.0    2.7e-48  163.9   0.0    1.6  1  TFB6      Subunit 11 of the general transcription factor TFII
  ------ inclusion threshold ------
      0.065   13.3   0.1       0.33   11.1   0.1    2.0  2  DUF5554   Family of unknown function (DUF5554)


Domain annotation for each model (and alignments):
>> TFB6  Subunit 11 of the general transcription factor TFIIH
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.9   0.0     3e-52   2.7e-48       1     170 [.      61     212 ..      61     213 .. 0.92

  Alignments for each domain:
  == domain 1  score: 163.9 bits;  conditional E-value: 3e-52
        TFB6   1 GYeslkellkdldklvdvlWvSgtpslqipyLlniaselldylekfppspratfklLrkLDkiFasLlaGeDvetgetlpGfeeglragmstTdkVRlk 99 
                 GY s++e++ dl  l dv+W+S+tp+lq++yLl+ia  l++yl++fpp p+at+++L+k+D++F+sLl+ eD+ tge lpGf+  ++ g s+Td+VRlk
  KHJ34642.1  61 GYVSFEEVAVDLGGLADVVWLSATPNLQTQYLLSIAGILITYLPAFPPVPSATLSILKKMDHAFSSLLKAEDIVTGEALPGFSGSMNVGFSKTDMVRLK 159
                 9*********************************************************************************99999************ PP

        TFB6 100 sivertRvlvvevlereeeeeeeeedeeededeeeeeeeeeeeeeeedeededeelemevarvYektlekl 170
                 ++ve+tRvlvv+++   e ee+       ++d ++e           ++ d+ e+++m+varvYe+t+++l
  KHJ34642.1 160 GLVEETRVLVVNLMGYMELEED-------KTDPQTE-----------TSMDSFENCDMDVARVYEHTIVQL 212
                 ***************9944444.......2332222...........33457899**************98 PP

>> DUF5554  Family of unknown function (DUF5554)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   3.6e-05      0.33      32      65 ..      82     114 ..      67     123 .. 0.77
   2 ?    0.3   0.0     0.089     8e+02      27      47 ..     121     143 ..     112     156 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.6e-05
     DUF5554  32 sllwnlltqyllpgvghilrtnfpvlpcvsschl 65 
                 s   nl tqyll     il t +p +p v s  l
  KHJ34642.1  82 SATPNLQTQYLLSIA-GILITYLPAFPPVPSATL 114
                 55569*******755.5999*********99876 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.089
     DUF5554  27 shacssllw..nlltqyllpgvg 47 
                  ha ssll   +++t   lpg  
  KHJ34642.1 121 DHAFSSLLKaeDIVTGEALPGFS 143
                 6999**99633688888888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       346  (0.0192983); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1617.11
//
Query:       KHJ34643.1  [L=585]
Description: putative duf1716 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-35  121.4   0.4    6.9e-35  119.4   0.4    2.1  1  CTNNBL    Catenin-beta-like, Arm-motif containing nuclear
     0.0006   19.8   0.0     0.0032   17.5   0.0    2.4  1  Arm       Armadillo/beta-catenin-like repeat
  ------ inclusion threshold ------
      0.033   14.3   2.5       0.12   12.4   2.5    1.9  1  PDCD2_C   Programmed cell death protein 2, C-terminal putativ
       0.19   11.8   5.4       0.33   11.0   0.5    3.1  3  Cnd1      non-SMC mitotic condensation complex subunit 1
       0.38   10.6   2.5       0.83    9.5   0.1    2.9  3  Sec7_N    Guanine nucleotide exchange factor in Golgi transpo


Domain annotation for each model (and alignments):
>> CTNNBL  Catenin-beta-like, Arm-motif containing nuclear
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.4   0.4   1.9e-38   6.9e-35       2     101 ..      92     192 ..      91     195 .. 0.97

  Alignments for each domain:
  == domain 1  score: 119.4 bits;  conditional E-value: 1.9e-38
      CTNNBL   2 eilelldeeeeeee.eekldeaalkklllklekkvkknqelRikyeddpekfmeSEadLdeeikelsvlaeapelYpelvelgavesLvgLlsHeNtDi 99 
                 ei++++d++ +++   e++d+++l+k++lk+e+k++kn+e+R+++e++p +++eSEa+L++eik+ls+l+e+pelY+e+v++g++ sL++Ll+HeNtDi
  KHJ34643.1  92 EIIDYVDQQMSTDVlPERIDSSWLRKQVLKFERKIQKNAEQRVRFEQEPLRYLESEAELHAEIKALSILSEHPELYQEIVKSGCIGSLISLLTHENTDI 190
                 7999****9999889***********************************************************************************9 PP

      CTNNBL 100 ai 101
                 + 
  KHJ34643.1 191 VS 192
                 75 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   8.9e-07    0.0032       2      40 ..     164     202 ..     163     203 .. 0.87

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 8.9e-07
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 +e  ++++++G++  L++LL++e+++++ + +  +s L+
  KHJ34643.1 164 PELYQEIVKSGCIGSLISLLTHENTDIVSVTLEIVSELT 202
                 67789***********************99887777665 PP

>> PDCD2_C  Programmed cell death protein 2, C-terminal putative domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   2.5   3.5e-05      0.12      28      96 ..      56     145 ..      18     158 .. 0.57

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.5e-05
     PDCD2_C  28 kekseleellseeeeeekskeekes........................eeeeleky................eksl.dktfekFkkriaaepeQvlRY 85 
                 k++++ +ell++            +                               +                ++s   k   kF+++i+++ eQ +R+
  KHJ34643.1  56 KSDADSDELLNK------------KyevdipddeegrffgggvtekqneI------IdyvdqqmstdvlperiDSSWlRKQVLKFERKIQKNAEQRVRF 136
                 112233332222............03333333334557777765544440......2445555555556754455557********************* PP

     PDCD2_C  86 elggkPLwlss 96 
                   +++PL + +
  KHJ34643.1 137 --EQEPLRYLE 145
                 ..778998874 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.5   9.3e-05      0.33      54     141 ..     170     267 ..     156     271 .. 0.75
   2 ?    0.4   0.0      0.17   6.1e+02     110     144 ..     307     350 ..     278     357 .. 0.66
   3 ?    0.2   0.1      0.19     7e+02      58     112 ..     434     487 ..     420     503 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 9.3e-05
        Cnd1  54 vkekgflselaklleDenprVvanalaalteiseksenaiynllpdiisklsd............alnecsewgqitilefLlsyipkdkqeaeslvek 140
                 + ++g +  l +ll+ en+ +v+ +l + +e+ +++ +a  ++  +i++ + +            +lne +e ++  ++ +L    +  +    +++ek
  KHJ34643.1 170 IVKSGCIGSLISLLTHENTDIVSVTLEIVSELTDENVEAEQSQWNEIVNTMIEadllsllgsnfsRLNESNESDRSGVYYSLNVLENLASM--ANIAEK 266
                 566899*****************************66454455555555555555555555688899999999999999888766666655..666666 PP

        Cnd1 141 l 141
                 +
  KHJ34643.1 267 I 267
                 5 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.17
        Cnd1 110 e......csewgqitilefLlsyipkdkq...eaeslveklcpr 144
                 +      c+ +g +  le++++y ++d     e e+ ve+l + 
  KHJ34643.1 307 TsnvrifCEMDGVNLFLEIIANYRKQDPAkgtEEEEFVENLFDI 350
                 13456779999999999999999999875444677777777665 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.19
        Cnd1  58 gflselakll.eDenprVvanalaalteiseksenaiynllpdiisklsdalnecs 112
                 g++s l++ll  ++  r++++a+++ ++  +    +++nl ++++s+l+ a ++++
  KHJ34643.1 434 GIFSSLLRLLaANSAYRIRTLAKFVEKDFEKIV--KLINLRREYASRLKLAEEKIK 487
                 566677777767777788888888877777775..577888888888886655544 PP

>> Sec7_N  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1   0.00023      0.83      50     107 ..     159     216 ..     150     318 .. 0.80
   2 ?   -2.6   0.0       1.3   4.6e+03      56      79 ..     363     384 ..     342     401 .. 0.62
   3 ?   -1.6   0.1      0.61   2.2e+03      32      32 ..     472     472 ..     428     525 .. 0.53

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00023
      Sec7_N  50 vfrkhpel.lqllkqklcplLlknlsespsfpvferslrivllLlkkfrseLktEievf 107
                 ++++hpel ++++k+  + +L+ +l +++++ +++++l+iv+ L  +  +  +++   +
  KHJ34643.1 159 ILSEHPELyQEIVKSGCIGSLISLL-THENTDIVSVTLEIVSELTDENVEAEQSQWNEI 216
                 678999*989999************.****************99987666655554444 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.3
      Sec7_N  56 ellqllkqklcplLlknlsespsf 79 
                 +++++   +lc  ++kn +   s+
  KHJ34643.1 363 KFVEAEGVELCLIMIKNGK--MSK 384
                 4555555667777777773..333 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.61
      Sec7_N  32 s 32 
                  
  KHJ34643.1 472 R 472
                 1 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1052  (0.0586759); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.63u 0.25s 00:00:00.88 Elapsed: 00:00:00.40
# Mc/sec: 4365.37
//
Query:       KHJ34644.1  [L=334]
Description: hypothetical protein EV44_g6063 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.2e-15   56.0   0.0    5.4e-15   55.2   0.0    1.4  1  SprT-like  SprT-like family


Domain annotation for each model (and alignments):
>> SprT-like  SprT-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2   0.0     3e-19   5.4e-15       2     104 ..     158     270 ..     157     291 .. 0.84

  Alignments for each domain:
  == domain 1  score: 55.2 bits;  conditional E-value: 3e-19
   SprT-like   2 eelfkklddavfggqaaggvkiiws..krl.nttaGranlkr..atvrhhasIeLsekllds..rsedrllntLaHElcHlalfvisgvr...nnpHGa 90 
                 e+++  +d+ +f+g  ag+v+++ws   r+ ++ +G++ l+r  ++++ ++ I Lse+ll++  ++++ ll t++HEl+H +lf+++g +   + +H a
  KHJ34644.1 158 ESILTAADTLFFDGALAGRVQWEWSsePRYrTEIIGTTALRRctRREGFETLIILSEPLLRNerYDRRLLLTTFIHELIHCYLFITCGFEarvEGGHTA 256
                 789999*******************8877767789******9666677899*********9966778889******************4445799**** PP

   SprT-like  91 eFkawaakvekala 104
                  F+++a+ +++++ 
  KHJ34644.1 257 GFHRIAEIIDSWVG 270
                 *******9998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (334 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       422  (0.0235373); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2395.60
//
Query:       KHJ34645.1  [L=354]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.057   13.2   0.5      0.057   13.2   0.5    3.2  3  zinc_ribbon_2  zinc-ribbon domain
      0.075   12.5   4.2        2.8    7.4   0.2    2.6  2  zf-ribbon_3    zinc-ribbon domain
       0.28   11.2  13.9       0.95    9.5  13.9    1.9  1  DZR            Double zinc ribbon


Domain annotation for each model (and alignments):
>> zinc_ribbon_2  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   1.1       0.2   1.2e+03       1       5 [.     227     231 ..     226     235 .. 0.61
   2 ?   13.2   0.5   9.5e-06     0.057       7      21 ..     237     251 ..     237     253 .. 0.88
   3 ?    3.8   0.9    0.0085        51       1      16 [.     264     279 ..     263     280 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.2
  zinc_ribbon_2   1 fCpnC 5  
                    fC++C
     KHJ34645.1 227 FCKRC 231
                    55555 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 9.5e-06
  zinc_ribbon_2   7 aelqdnakFCpyCGt 21 
                    a++  +a+FC++CG+
     KHJ34645.1 237 AKNYSRAPFCSNCGS 251
                    688999********6 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.0085
  zinc_ribbon_2   1 fCpnCGaelqdnakFC 16 
                    +C nCG ++  +++ C
     KHJ34645.1 264 KCRNCGGPHRSDSRRC 279
                    7999997777776666 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.2   0.00048       2.8      15      24 ..     242     251 ..     238     257 .. 0.79
   2 ?    5.3   0.7    0.0022        13      16      25 ..     262     271 ..     261     271 .. 0.87

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00048
  zf-ribbon_3  15 ddnvCpyCGt 24 
                  ++++C +CG+
   KHJ34645.1 242 RAPFCSNCGS 251
                  6778888875 PP

  == domain 2  score: 5.3 bits;  conditional E-value: 0.0022
  zf-ribbon_3  16 dnvCpyCGtk 25 
                  +++C +CG++
   KHJ34645.1 262 ATKCRNCGGP 271
                  689*****86 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5  13.9   0.00016      0.95       1      45 [.     228     279 ..     228     281 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00016
         DZR   1 CpqCgee....lppdarfCseCgtklkavaa...edrCpsCgekvdpearfC 45 
                 C++C+      + ++a fCs+Cg++  av +   +++C +Cg +  +++r C
  KHJ34645.1 228 CKRCNGHypakNYSRAPFCSNCGSTNHAVDScmaATKCRNCGGPHRSDSRRC 279
                 88898776666889999********766666677**********99999999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (354 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       663  (0.0369792); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2503.96
//
Query:       KHJ34646.1  [L=453]
Description: putative mis12-mtw1 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-49  169.0   3.8    3.5e-49  167.7   3.8    1.6  1  MIS13     Mis12-Mtw1 protein family
  ------ inclusion threshold ------
      0.074   13.0   0.2        0.2   11.6   0.2    1.7  2  DUF4745   Domain of unknown function (DUF4745)


Domain annotation for each model (and alignments):
>> MIS13  Mis12-Mtw1 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  167.7   3.8   3.9e-53   3.5e-49       1     296 [.     156     444 ..     156     451 .. 0.85

  Alignments for each domain:
  == domain 1  score: 167.7 bits;  conditional E-value: 3.9e-53
                 XXXXX.....XXXX.XXXXXXXXXXXXXXXXXXXXX.......XXXXXXXC..CHHCCTSXTT.STCHHHHHHHHHHHHHHHHHHHC.......HTTT. CS
       MIS13   1 lpLsdteiilqeke.kkerarnkRrsslsqrGRRlSsLgtgftiaspHkdvpesefykhiens.laeplrlrqLlnWclkralekleekakseskkeet 97 
                 lpLsdt++i+++ke  ++ ++ +Rrssl  rGRR+SsL+++ ++a+pH++v+ ++fyk+ie++ l+ep+r+rqLl+W ++r l            +   
  KHJ34646.1 156 LPLSDTPVINRNKEfRNKSREGNRRSSLGLRGRRASSLIDNGQSAIPHQEVEMTDFYKYIEAEgLSEPRRMRQLLTWTGERCLGPNS--------STGR 246
                 69*************99999****************************************************************999........4445 PP

                 TT.HHHCHHHHHCCHCCHHHHCHHCHHCCHHHHHHCHHHTHCSTTGCCCSXXX....XXSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH.... CS
       MIS13  98 eesdakkiarvIikeflrdlkkgkisidWeareeeeeedendteltklFedndkkklpnaknieneenlailkekikalknEikeWaklladskd.... 192
                     a   ar +++++l+d+ ++++ +dW++r+e+e  +               +k+pn++n+e+e n+  +++++k+l++E+ +W++l++++++    
  KHJ34646.1 247 LSRAAELAARHVKESLLNDFANKSEYSDWFNRQEAEPAK--------------IVKKPNPRNLELECNIVAVEARLKKLREERDKWKELAKPTPQfpli 331
                 555667889************************776665..............4568**************************************8776 PP

                 ....HH.HHHHHHTT-.----------S--........HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTSTTTSSXXXXXXXXX CS
       MIS13 193 .pdkeiqkekklvdse.akidsdtqepdta........qrilsdnanveskletkvDeLqdsvhkLdsaskalnelstqklqklsrllakrskkekkss 281
                  pd++  ++   +d++ + +++     ++         ++i ++ ++ +s l ++vD+ +d v+kL+  ++ + ++++  l      l++   kek+++
  KHJ34646.1 332 lPDMNELNSSH-IDATlLDPEQAIILAEASsssasdlrHQISQKLQKFQSMLLFEVDQFADGVYKLERYKEIVDRVADRILSLSAKKLEEFHCKEKEQI 429
                 66666533333.555544444444444444888899999*****************************8888888888888433444555556777777 PP

                 XXXX..XXXXXXXXX CS
       MIS13 282 esrkkstkkLlrgls 296
                   r    k++lr+ls
  KHJ34646.1 430 GTRDLPIKEVLRSLS 444
                 7777779******99 PP

>> DUF4745  Domain of unknown function (DUF4745)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       1.4   1.3e+04      66      88 ..     247     266 ..     244     280 .. 0.68
   2 ?   11.6   0.2   2.2e-05       0.2      66     120 ..     356     410 ..     337     416 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 1.4
     DUF4745  66 larAstvatstvKseilslLqef 88 
                 l rA+  a+  vK  +l    +f
  KHJ34646.1 247 LSRAAELAARHVKESLL---NDF 266
                 66788888888887554...444 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 2.2e-05
     DUF4745  66 larAstvatstvKseilslLqefstmaassvdqesfslldiqrireillenlltv 120
                 la+As+  +s ++ +i + Lq f+ m    vdq       ++r +ei+ + +  +
  KHJ34646.1 356 LAEASSSSASDLRHQISQKLQKFQSMLLFEVDQFADGVYKLERYKEIVDRVADRI 410
                 89************************9999***99999*********99887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (453 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       979  (0.0546043); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 3444.51
//
Query:       KHJ34647.1  [L=135]
Description: putative 40s ribosomal protein s24 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.2e-35  119.0   0.0      1e-34  118.3   0.0    1.3  1  Ribosomal_S24e  Ribosomal protein S24e


Domain annotation for each model (and alignments):
>> Ribosomal_S24e  Ribosomal protein S24e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.3   0.0   5.6e-39     1e-34       1      78 [.      27     104 ..      27     105 .. 0.97

  Alignments for each domain:
  == domain 1  score: 118.3 bits;  conditional E-value: 5.6e-39
                     EEEEE-SSS-S--HHHHHHHHHHHHTS-CTTEEEEEEEE-SSSSEEEEEEEEES-HHHHHHHS-HHHHHHTTSS---S CS
  Ribosomal_S24e   1 vvdvlHpgkatpskteireklakmykvdpdlvvvfgfrthfGggkttGfakiYdsleaakkfEpkhrlaRnglaekkk 78 
                     vvd+lHp++a++sk+e+r kla+myk+++++v vfg+rt+fGggkttGf++iYds+ea+kkfEp++rl+R g+ +k +
      KHJ34647.1  27 VVDILHPNRANISKDELRGKLAEMYKANKNQVNVFGLRTQFGGGKTTGFGLIYDSPEALKKFEPHYRLVRVGVSSKIE 104
                     79**********************************************************************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       640  (0.0356964); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.21s 00:00:00.56 Elapsed: 00:00:00.36
# Mc/sec: 1138.38
//
Query:       KHJ34648.1  [L=277]
Description: putative protein fam86a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.5e-20   71.8   0.0    7.8e-20   71.3   0.0    1.1  1  Methyltransf_16  Lysine methyltransferase
     0.0099   15.4   0.0      0.017   14.7   0.0    1.3  1  MTS              Methyltransferase small domain
  ------ inclusion threshold ------
      0.014   14.8   0.0      0.019   14.4   0.0    1.2  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
      0.028   14.2   0.0      0.046   13.5   0.0    1.3  1  DUF938           Protein of unknown function (DUF938)
      0.054   13.2   0.0       0.08   12.7   0.0    1.4  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
      0.058   14.1   0.1       0.28   12.0   0.0    2.2  2  Methyltransf_12  Methyltransferase domain


Domain annotation for each model (and alignments):
>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.3   0.0   2.6e-23   7.8e-20      17     170 ..      77     233 ..      64     237 .. 0.89

  Alignments for each domain:
  == domain 1  score: 71.3 bits;  conditional E-value: 2.6e-23
  Methyltransf_16  17 igrkvWdaavvlvkylekklakelganelsklsvlELGsGtGlvGlavaellpeakviltDlee.llellkknielnknalkskvkvevLdWge 109
                       g   W+aa+ +  yl +      + + ++ +++lELGsGt    +  a++l+  +v+ tD +  ++   ++n  +n+ +  ++++ e L Wg+
       KHJ34648.1  77 TGFRTWEAALHMGNYLCN------HPEIVRAKRILELGSGTAYLSILCALHLKASHVLTTDGSTsVISSHNYNFGINQLQYPNQIRSELLVWGQ 164
                      67789************9......78899********************************988799*********9999*************9 PP

  Methyltransf_16 110 el.....eedllekeevDlilaaDcvYledslelLvkvLkellkkesk..vlvaykkrreae.kkFfkl 170
                       +     ++++++ + +Dlil aD++Y++  ++ L+ ++++l ++ ++  vl+a   r+e+  + Ffk+
       KHJ34648.1 165 SIncakqYPEFFNGNMIDLILGADVIYDNAGISELIVTISDLFSTFPNanVLIASTVRNEETfRMFFKN 233
                      8744433699********************************99876666***9999977652567776 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0   5.7e-06     0.017      31      82 ..     100     152 ..      88     171 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 5.7e-06
                 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.E CS
         MTS  31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.v 82 
                 +++++l lG+G+ +l++ +a + +  +v  +d ++  + s + n+  n+l+  
  KHJ34648.1 100 RAKRILELGSGTAYLSILCALHLKASHVLTTDGSTSVISSHNYNFGINQLQyP 152
                 6789******************************************9999852 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   6.2e-06     0.019     162     211 ..     101     151 ..      73     185 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 6.2e-06
        PrmA 162 geevlDvGtGSGiLai.aaakLgakkvvavDiDevAvkvakeNaelNkvea 211
                  +++l +G G++ L+i  a+ L a++v+ +D     +++ + N+ +N+++ 
  KHJ34648.1 101 AKRILELGSGTAYLSIlCALHLKASHVLTTDGSTSVISSHNYNFGINQLQY 151
                 5789***********956899**************************9876 PP

>> DUF938  Protein of unknown function (DUF938)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.5e-05     0.046      26     113 ..     101     182 ..      94     204 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.5e-05
      DUF938  26 tervLEiasGtGqHAvffApalpnlkwqpsdqdeelresiaawadelalsnlkpPleldvtaevapvereappapasidailsinllH 113
                  +r+LE++sGt    +  A +l+  + +++d   ++   i     +++++ l+ P ++     v+      +   +++   ++ n++ 
  KHJ34648.1 101 AKRILELGSGTAYLSILCALHLKASHVLTTDGSTSV---ISSHNYNFGINQLQYPNQIRSELLVWGQS---INCAKQYPEFFNGNMID 182
                 458****************************99988...889999**********9877766666555...56788999999999986 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.7e-05      0.08      57     101 ..      84     127 ..      40     152 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.7e-05
                 --HHHHHHHHHHTT--TT-EEEEES-TTSHHHHHHHHHHCTTCEE CS
        PCMT  57 SaphmvalalellelkkgarvLevGsGsGyltavlarlvgekgrv 101
                  a hm  +++++ e+ + +r+Le+GsG+ yl+ + a  ++++  v
  KHJ34648.1  84 AALHMGNYLCNHPEIVRAKRILELGSGTAYLSILCALHLKASH-V 127
                 6889999999999******************998887777655.4 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0       1.1   3.2e+03      14      31 ..      19      35 ..      12      39 .. 0.76
   2 ?   12.0   0.0   9.3e-05      0.28       1      49 [.     105     153 ..     105     208 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.1
  Methyltransf_12 14 lleklpdieytgvDisps 31
                     l +k ++++yt +D+s +
       KHJ34648.1 19 LQAK-SHVTYTLYDLSHN 35
                     5555.8999*****9976 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 9.3e-05
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnn 49 
                      Le+G+Gt+ l+  ++ +l+ ++++ +D s+s+i  +   +  ++ +  n
       KHJ34648.1 105 LELGSGTAYLSILCALHLKASHVLTTDGSTSVISSHNYNFGINQLQYPN 153
                      8********************************6555555544444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (277 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       332  (0.0185175); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2069.46
//
Query:       KHJ34649.1  [L=89]
Description: putative fam86a protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.047   13.4   0.4      0.058   13.1   0.4    1.2  1  DUF1366   Protein of unknown function (DUF1366)


Domain annotation for each model (and alignments):
>> DUF1366  Protein of unknown function (DUF1366)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.4   3.2e-06     0.058      38      89 ..      25      84 ..       9      88 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 3.2e-06
     DUF1366 38 paekidksntellkea..ekviYqelfPqrAenE......kFneldeliekakatiektE 89
                +  kid ++ e l  a  ++ iYq lf ++A++       +F+ l++l e+ +++ie ++
  KHJ34649.1 25 LYPKIDYPENEYLSDAsnQQTIYQTLFAEKALKHelpvkyQFRVLKKLLERIEKSIEDSD 84
                56799********98833579**********87523333357777777777777777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       842  (0.046963); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 714.43
//
Query:       KHJ34650.1  [L=156]
Description: hypothetical protein EV44_g2441 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.9e-08   33.0   0.1    5.9e-08   32.5   0.1    1.2  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   0.1   3.3e-12   5.9e-08       2      77 ..      19      98 ..      18     104 .. 0.91

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 3.3e-12
  Retrotran_gag_2  2 kkkdakalalIvlsisdsllelvk....eektakevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleel 77
                     + +++ a+++I++ +sd+l el      e ++a+ + + Lk+ y  +++++ ++l k++ +lkm+eg+ +++hi+++e++
       KHJ34650.1 19 NDRNDAAHSAILNGVSDDLQELACsfdeELESARVAMRLLKDKYDYETTTSTIQLFKEFSELKMAEGDLISHHITQFETA 98
                     678999************99998633346899*********************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       677  (0.0377601); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1148.95
//
Query:       KHJ34651.1  [L=104]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   12.8   0.0       0.18   12.2   0.0    1.3  1  G5        G5 domain


Domain annotation for each model (and alignments):
>> G5  G5 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     1e-05      0.18      38      67 ..      24      54 ..      19      62 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1e-05
                EEEEEEEEEETTEEEEE---EEEEEE.--B- CS
          G5 38 kevtyrvtyenGkevsrevvseevvk.epvp 67
                ++vt+ ++ +nG+e +r + s++++  +pv+
  KHJ34651.1 24 RQVTWATVARNGQEKARVIQSNKTLLlAPVN 54
                89******************99996669987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 830.50
//
Query:       KHJ34652.1  [L=118]
Description: hypothetical protein EV44_g3541 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       235  (0.0131073); expected 358.6 (0.02)
Passed bias filter:                      232  (0.0129399); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.19s 00:00:00.57 Elapsed: 00:00:00.35
# Mc/sec: 1016.52
//
Query:       KHJ34653.1  [L=200]
Description: hypothetical protein EV44_g4162 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       714  (0.0398237); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1634.57
//
Query:       KHJ34654.1  [L=182]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.57    9.9   9.9       0.14   11.9   5.8    2.1  2  DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit


Domain annotation for each model (and alignments):
>> DNA_RNApol_7kD  DNA directed RNA polymerase, 7 kDa subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.11   1.9e+03      20      23 ..      34      37 ..      23      42 .. 0.77
   2 ?   11.9   5.8   7.8e-06      0.14       3      24 ..      52      75 ..      51      80 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.11
                    -SSS CS
  DNA_RNApol_7kD 20 CkeC 23
                    Ck C
      KHJ34654.1 34 CKRC 37
                    7777 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 7.8e-06
                    -SSS--B--..--SSS----SSS- CS
  DNA_RNApol_7kD  3 CgeCgaevs..lkkgdpiRCkeCG 24
                    Cg+Cg+++   ++ +++ RC++CG
      KHJ34654.1 52 CGNCGSNMHtqDNCKAATRCRNCG 75
                    ******987557889********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       823  (0.0459033); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.19s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 1521.27
//
Query:       KHJ34655.1  [L=510]
Description: putative duf803 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.9e-18   65.3   8.1    7.7e-18   64.6   8.1    1.3  1  Mg_trans_NIPA  Magnesium transporter NIPA
     0.0017   17.7   0.8     0.0017   17.7   0.8    2.7  3  PUNUT          Purine nucleobase transmembrane transport
     0.0045   17.2   0.3     0.0045   17.2   0.3    3.0  2  EamA           EamA-like transporter family


Domain annotation for each model (and alignments):
>> Mg_trans_NIPA  Magnesium transporter NIPA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.6   8.1   1.3e-21   7.7e-18       4     287 ..      14     307 ..      11     312 .. 0.80

  Alignments for each domain:
  == domain 1  score: 64.6 bits;  conditional E-value: 1.3e-21
  Mg_trans_NIPA   4 liGvlLavssslfigssfilkkkgllrl...arkgevrageGGyaylkevlWwaGlltmavGe.aanfaayafaPatLvtPLGalsvivsavlasl 95 
                     iG+l+ ++s+ + ++ + l++k++l     +++++ r+       ++   W  G+ + ++ + ++  +  +  P  +++ L a  +++ ++ as+
     KHJ34655.1  14 AIGILVGLASTNVQSIGLTLQRKSHLLEdenSQYNDRRP-----P-YRRRRWQMGMGMFIISNlVGSTIQITTLPLPVLSTLQASGLVFNSICASF 103
                    589999999**************9985511134444444.....3.46677888986666655256777788899*9******************* PP

  Mg_trans_NIPA  96 lLkekLkllgllGcllailGstvlvihaPkeeeieslkevadllvdpaflvyvilvvvvvlvlilyve......prkGktni.....lvyitlcsl 180
                    +L e +    l G ll   G++++ i+    e +++l+++ +llv+ +f++++il  v+v+ +i++ e          k ++     l y ++  +
     KHJ34655.1 104 ILGEPFTQWSLGGTLLISSGAVLIAIFGAIPEPAHTLDQLLYLLVQRNFIIWMILQAVLVIGIIVITEflsqipSLSSKPRVrllcgLAYGGVSGI 199
                    *****************************************************9987777766654432222212223333311122456667778 PP

  Mg_trans_NIPA 181 lgsltvisvk.algiaikltlaGkaqlkyalawilllvlvicvvlqinyLnkaldifntsivtPvyyvlfttlvivasailfkefleasvddvlge 275
                    l++ +++  k a+ + i+  ++ ++q+ +++ w +ll+l+    +q+ yL + l + +ts++ P+ + ++  ++i+ ++i fk+    + ++    
     KHJ34655.1 200 LSAHSLLVAKsAVELLIRTIVDSVNQFDQWQSWAILLSLIFLALTQLYYLHRGLKLVSTSVLYPIVFCIYNIIAILDGLIYFKQTDRLRPLHAGLI 295
                    88888877775899*********************************************************************9887777666666 PP

  Mg_trans_NIPA 276 lsGfllvllgvf 287
                      G  ++l+gv+
     KHJ34655.1 296 ALGTSILLSGVL 307
                    667777777766 PP

>> PUNUT  Purine nucleobase transmembrane transport
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.24   1.4e+03     204     236 ..      17      49 ..      13      58 .. 0.84
   2 !   17.7   0.8   2.8e-07    0.0017      93     147 ..      75     129 ..      59     145 .. 0.84
   3 ?   -0.2   1.0     0.079   4.7e+02     120     191 ..     145     216 ..     139     244 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.24
       PUNUT 204 ivlslvatvvcvvGllisGefkelkkeaeeFkk 236
                 i++ l+ t v  +Gl  +   + l+ e  ++++
  KHJ34655.1  17 ILVGLASTNVQSIGLTLQRKSHLLEDENSQYND 49 
                 78899999*********9999999999999976 PP

  == domain 2  score: 17.7 bits;  conditional E-value: 2.8e-07
       PUNUT  93 slgllylpvstfslilatqLaFtaifsalinkqkftrfiinsvvlltisaallal 147
                  +  + lp+ + s + a+ L+F++i + +i    ft++++   +l++ +a+l+a+
  KHJ34655.1  75 TIQITTLPLPVLSTLQASGLVFNSICASFILGEPFTQWSLGGTLLISSGAVLIAI 129
                 45567899999***************************************99987 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.079
       PUNUT 120 alinkqkftrfiinsvvlltisaallalssssdkpaeeskkkyvigfiltlaasllfaLlLslvellfekvl 191
                 +l+++  f  ++i+  vl++  ++++   s+  + +++ + + + g++   ++++l a +L + + + e ++
  KHJ34655.1 145 YLLVQRNFIIWMILQAVLVIGIIVITEFLSQIPSLSSKPRVRLLCGLAYGGVSGILSAHSLLVAKSAVELLI 216
                 788889999999999998888888888877777777777778888877777777777777766655555544 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.3   7.5e-07    0.0045      86     136 ..      78     128 ..      46     129 .. 0.80
   2 ?    1.0  10.5     0.072   4.3e+02      60     136 ..     228     303 ..     152     304 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 7.5e-07
        EamA  86 lkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvllil 136
                 +++++  + s +++   vf  i+++++lge++t ++l g++li  G++li 
  KHJ34655.1  78 ITTLPLPVLSTLQASGLVFNSICASFILGEPFTQWSLGGTLLISSGAVLIA 128
                 555666789999************************************996 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.072
        EamA  60 slkdwllllllgllgtvlaf.llffyalkktsasnaslitslePvftlilsvlllgekltlkqllgivlillGvllil 136
                  +++w++ll l +   +l++ + +  +lk +s s+  +i++ +  +++il  l++ ++   +  l ++li lG+ ++l
  KHJ34655.1 228 QWQSWAILLSLIF--LALTQlYYLHRGLKLVSTSVLYPIVFCIYNIIAILDGLIYFKQTDRLRPLHAGLIALGTSILL 303
                 3444555555554..45555234569***********************************************98875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       962  (0.0536561); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 3707.70
//
Query:       KHJ34656.1  [L=520]
Description: putative wd repeat containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.8e-14   52.3   4.8      0.031   15.2   0.0    5.6  6  WD40         WD domain, G-beta repeat
    6.1e-05   23.3   0.0        0.4   11.0   0.0    3.2  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
      0.048   12.6   0.0       0.37    9.7   0.0    2.1  2  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
      0.057   12.1   0.0        0.1   11.3   0.0    1.3  1  Nup160       Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       3.2   1.4e+04      18      27 ..     124     133 ..     115     134 .. 0.80
   2 ?   -0.8   0.0      0.76   3.4e+03      13      22 ..     186     195 ..     177     205 .. 0.68
   3 !   15.2   0.0   6.8e-06     0.031       9      35 ..     243     270 ..     235     273 .. 0.87
   4 !   11.6   0.0   8.9e-05       0.4      23      38 .]     347     363 ..     318     363 .. 0.75
   5 !   12.2   0.2   6.1e-05      0.27       9      37 ..     381     411 ..     376     412 .. 0.80
   6 !    9.9   0.0   0.00032       1.4      10      37 ..     489     519 ..     480     520 .] 0.76

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 3.2
                 EETTSSEEEE CS
        WD40  18 fspdgawlas 27 
                 fs+d+++l+s
  KHJ34656.1 124 FSKDHDFLSS 133
                 9999999864 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.76
                 EEEEEEETTS CS
        WD40  13 vtslafspdg 22 
                 ++s++f+p+ 
  KHJ34656.1 186 IYSICFHPSR 195
                 8889977764 PP

  == domain 3  score: 15.2 bits;  conditional E-value: 6.8e-06
                 SS.SSEEEEEEETTSSEEEEEETTSEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvr 35 
                  H + +tslafs dg  l s+s D +vr
  KHJ34656.1 243 MHsKTITSLAFSADGENLYSSSFDSSVR 270
                 59777**************9999****9 PP

  == domain 4  score: 11.6 bits;  conditional E-value: 8.9e-05
                 SE.EEEEETTSEEEEEE CS
        WD40  23 aw.lasGsdDgtvriWd 38 
                 +  la++s D+t++iWd
  KHJ34656.1 347 PHlLATASLDRTLKIWD 363
                 4427899*********9 PP

  == domain 5  score: 12.2 bits;  conditional E-value: 6.1e-05
                 SS.SS..EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   9 GH.ss..vtslafspdgawlasGsdDgtvriW 37 
                  H s   v++ ++s +g+ ++ +s+D t++i+
  KHJ34656.1 381 EHeSRlsVSHASWSASGHIVT-SSYDDTIKIY 411
                 574446799999*******86.666******8 PP

  == domain 6  score: 9.9 bits;  conditional E-value: 0.00032
                 SSSEEEEE....EETTSSEEEEEETTSEEEEE CS
        WD40  10 Hssvtsla....fspdgawlasGsdDgtvriW 37 
                   ++t++     f+p+++w++ G+  g++ +W
  KHJ34656.1 489 D-NITAVPaaaiFHPSQNWISGGTASGKLCLW 519
                 4.4777778888*******965568******9 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0       1.4   6.4e+03      40      71 ..     185     218 ..     178     228 .. 0.68
   2 !   11.0   0.0   8.9e-05       0.4      35      88 ..     242     298 ..     234     301 .. 0.86
   3 !    8.4   0.0    0.0006       2.7      33      79 ..     380     428 ..     346     455 .. 0.71

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 1.4
  ANAPC4_WD40  40 evrsLaWkpd.gklLav.aysdgevrlldaesgk 71 
                  ++ s++++p+ +k L++ + + g++ ++da+++ 
   KHJ34656.1 185 RIYSICFHPSrEKPLVFaGDKVGNIGIFDASQEC 218
                  5677777775255555514566899999998765 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 8.9e-05
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksek...avtclg 88 
                  + ++++++sLa++ dg+ L  +  d++vr ++ ++g  ++++  ++ +    ++c++
   KHJ34656.1 242 KMHSKTITSLAFSADGENLYSSSFDSSVRKFNLQKGVSIEAYAPTDPEedlPISCME 298
                  567899*********************************999887776666788875 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.0006
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlld...aesgkvvhslsvk 79 
                   e+++  +v++ +W+ +g++   +y+d+ +++++   a s ++ h+++ +
   KHJ34656.1 380 GEHESRLSVSHASWSASGHIVTSSYDDT-IKIYHlkdAGSYQIGHEIDKN 428
                  67889999************99999885.555550005555566666555 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   8.4e-05      0.37     173     216 ..     229     274 ..     200     282 .. 0.82
   2 ?    0.3   0.0     0.062   2.8e+02     187     216 ..     383     413 ..     349     436 .. 0.72

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 8.4e-05
    Ge1_WD40 173 sveeiee.gllkieehs.liveaafspdGtalatasedGevkffqv 216
                 + ++++e ++  ++ hs +i++ afs+dG  l  +s d  v+ f +
  KHJ34656.1 229 DDDDLKEpVITAVKMHSkTITSLAFSADGENLYSSSFDSSVRKFNL 274
                 4455555367789999989**********************98865 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.062
    Ge1_WD40 187 hs..liveaafspdGtalatasedGevkffqv 216
                 +s   +++a++s+ G    t+s d ++k + +
  KHJ34656.1 383 ESrlSVSHASWSASGHI-VTSSYDDTIKIYHL 413
                 33236899999999975.57899999999965 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   2.2e-05       0.1     232     260 ..     349     382 ..     341     419 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 2.2e-05
                 EEEEEETT-EEEEEETTTTEEEEEEE--...... CS
      Nup160 232 ylfalsrdgkLrvWnlltgkclatidll.....r 260
                 +l+++s+d++L++W+l+++k  +    +      
  KHJ34656.1 349 LLATASLDRTLKIWDLRNLKGSRENKAPallgeH 382
                 799***************9988776665444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       777  (0.0433376); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.22s 00:00:00.80 Elapsed: 00:00:00.39
# Mc/sec: 3960.43
//
Query:       KHJ34657.1  [L=169]
Description: hypothetical protein EV44_g3155 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1265.44
//
Query:       KHJ34658.1  [L=201]
Description: putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.2e-07   29.9   1.3    6.3e-07   29.4   0.1    1.9  2  Acyltransf_C     Acyltransferase C-terminus
      5e-06   26.2   0.0    7.8e-06   25.5   0.0    1.3  1  Acyltransferase  Acyltransferase
  ------ inclusion threshold ------
       0.29    9.5   1.2       0.37    9.2   1.2    1.1  1  ABC_export       Putative ABC exporter


Domain annotation for each model (and alignments):
>> Acyltransf_C  Acyltransferase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       1.3   7.6e+03      24      34 ..      70      80 ..      66      82 .. 0.75
   2 !   29.4   0.1   1.1e-10   6.3e-07       8      45 ..     148     185 ..     142     192 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.3
  Acyltransf_C 24 edeeelaeWlh 34
                  e+ ee + W++
    KHJ34658.1 70 EKAEESKLWCK 80
                  45688899997 PP

  == domain 2  score: 29.4 bits;  conditional E-value: 1.1e-10
  Acyltransf_C   8 sevhiyvrripleevPedeeelaeWlhelfeeKDklle 45 
                   ++ h+ v+r++++e+Pe + ela Wl+++++eK k l+
    KHJ34658.1 148 YRFHVDVQRFSIDELPEIDAELALWLENRWVEKGKFLQ 185
                   789******************************99887 PP

>> Acyltransferase  Acyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0   1.3e-09   7.8e-06      44     135 .]       5     122 ..       2     122 .. 0.89

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 1.3e-09
  Acyltransferase  44 vviiakkellsipllgflmrllgfifidRksnaraagsleniselleeg...klvviFPEGtrsre..................gel.lpfkkG 115
                      ++  +k el ++p+lg++++++g+  ++R +  ++++ le++   + eg    +++ F E tr  +                    l +p  kG
       KHJ34658.1   5 CRWFSKIELRWVPFLGWGIWAMGMPMVSR-NWTKDKKELERVFAGITEGrwpTWLISFSEATRYTKekaeesklwcktnnkpfpQHLlYPRVKG 97 
                      56678999*********************.999999999999998888856556888******9999************999974447****** PP

  Acyltransferase 116 lvrlaakak.....kgvpivPvais 135
                      +v  ++ ++     k+v++v++a+s
       KHJ34658.1  98 FVTTVQYLRkashiKSVYDVTIAYS 122
                      ******999999***********96 PP

>> ABC_export  Putative ABC exporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   1.2   6.2e-05      0.37     219     248 ..       6      36 ..       1      38 [. 0.86

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 6.2e-05
  ABC_export 219 aflsspllsliPlfGWtkaliaall.sgill 248
                  ++s   l+++P++GW ++++  ++ s +++
  KHJ34658.1   6 RWFSKIELRWVPFLGWGIWAMGMPMvSRNWT 36 
                 6788888**************9999898886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       538  (0.0300073); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1568.08
//
Query:       KHJ34659.1  [L=574]
Description: putative translation initiation factor eif3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   5.1e-212  705.5   0.0   6.3e-212  705.2   0.0    1.0  1  eIF-3_zeta  Eukaryotic translation initiation factor 3 subuni
     0.0081   15.8   0.1      0.021   14.5   0.0    1.6  1  DUF569      Domain of unknown function (DUF569)


Domain annotation for each model (and alignments):
>> eIF-3_zeta  Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  705.2   0.0    7e-216  6.3e-212       9     519 ..      15     553 ..       9     554 .. 0.92

  Alignments for each domain:
  == domain 1  score: 705.2 bits;  conditional E-value: 7e-216
                 XXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXX........XX...XXXX.XXXXXXXXXXXXXXXXXXXXXXX..XX.XXX.... CS
  eIF-3_zeta   9 nedgWGPseelpeefkdipyapfsksdklgkvaDwtseakekrekr........ra...ekygagsasafayqheedessFslVdnkkakkkkkeak.. 94 
                 +ed+WGPs  ++++++  pyap+sksdklg++aDw+se k+ r+ r        ++   + ygag++s fa+q++edes+Fs+V+n ++++k +  +  
  KHJ34659.1  15 SEDSWGPSLPTETTLNGAPYAPYSKSDKLGRMADWSSEGKDGRDGRggrqpynrNYrdqQVYGAGTSSLFAVQTAEDESTFSVVSNVRDSTKARFGRgg 113
                 4589****665555************************88888888888877741332235**************************999977776457 PP

                 ......XXXXXXXXXXX.XXXXXXXXXX.............................XXXXXXXXXX-----TT-EEEEEEEHHHHHT--TT----EEE CS
  eIF-3_zeta  95 ......rqrrgrgeekkerqqqqalnkkqgeeekeerskkkkkkk..kgrrkgwkdkkdkeqrnreasvevkpeWkvleeidfsrLsklslevkepedl 185
                        qr+gr +++++r+q q+++ + g+++ ++ + ++ ++   +grr+gwkd+ dk+qrnr+asv++kp+W++leeidf+rL+kl+l+++e+ed+
  KHJ34659.1 114 nysrvrGQRAGRADARSGRGQFQKVSGRGGQQAYNNYNDRGGRGGarGGRRFGWKDY-DKPQRNRDASVNIKPDWQMLEEIDFNRLAKLNLDTDEGEDI 211
                 7664433335555555557777777777777766666666653333589999****9.***************************************** PP

                 EEEEEE-BB-GGGGG-BTT.B-EE------B-----GGG-HHHHHHTT.TS-SEEEEHHHHHHHHTGGG--S-EEEEEEEETTEEEEE--TTSCTTS-- CS
  eIF-3_zeta 186 esyGkleyYdksydrittk.nekpLqkldrvfynvttsdDpviqelakekkatvfaTDailslLmcatrSvysWdivvtkkgnklfldkrdgseidllt 283
                 +syG+l+yYd+s+d+  +k  e++L+ +dr++ynvtts+Dpviqela++++at+faTD+i+s+Lmc++rS y+Wdiv+ ++gnk+fldkrd+s++d++t
  KHJ34659.1 212 DSYGFLYYYDRSFDKQPVKiGERKLDIVDRAAYNVTTSSDPVIQELAEKNEATIFATDSIISMLMCSPRSIYPWDIVIIRQGNKVFLDKRDNSTLDMVT 310
                 *****************88469***************************************************************************** PP

                 SSTTSSS--....-S-TTSTTSHHHHHHHHHHHHHHHHHHTBET.TS--EE-SB--TTS-GGGCC.CB-SEEEEEEEEE-STT....-EEEEEEEESEE CS
  eIF-3_zeta 284 VnEtaadppl...edeedsiNspssLslEAtlinqnfsqqvlkeseeekvkfeepnpFvseeeeteelasvaYrYrkfdLsde.eekielvvRtevdav 378
                 VnE+aad+p+   e ++d iN+ps+L+ EAt+in+nf++qv+ e+e++k+++ ++npF+++ eete+ as+aY+Yr+fdLs + e++++l+vRte+dav
  KHJ34659.1 311 VNENAADAPMdasEGSKDAINQPSALAEEATYINHNFANQVMIENENKKIEMPHENPFYNSAEETEPAASKAYKYRRFDLSLNdEDPVHLIVRTELDAV 409
                 **********999999*****************************999**********************************999************** PP

                 EE-TTS..EEEEEEEEEEES-HHHHT-..-.-HHHHTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHT-SEEEEEEEEEEETTEEEEEEEEEEEEE-HHH CS
  eIF-3_zeta 379 lkgkekeqkqfvtikaLnEfdskaqga..a.dWrskLdsqrGAvlatElknNscklakWtvqalLagadqlKlGyvsRanpkdaskHviLgvqsykpkd 474
                  k++ + ++qf+t+kaLnEfd+kaqg+  a dWr+kL sqrGAv+atE+knNsckla+Wtvq+++a ad++KlG+vsRanpk +++HviLgv  +kp+d
  KHJ34659.1 410 QKNAISGEDQFLTVKALNEFDHKAQGSggAlDWRTKLVSQRGAVIATEMKNNSCKLARWTVQSIMARADVMKLGFVSRANPKVNDRHVILGVIGWKPRD 508
                 **99988899****************99967******************************************************************** PP

                 HHHHTT--HHHHHHHHHHHHHHHHTS-SEEEEEEE-TTSSEEEEE CS
  eIF-3_zeta 475 laaqinlnldNaWgivrtivdlvmkqpdgkYvllKdpnkpvirlY 519
                 +a+q+nl+l+N+Wgivrti+d+++k+++gkYvllKdpnkpv+rlY
  KHJ34659.1 509 FAQQMNLSLSNGWGIVRTIADMCLKREEGKYVLLKDPNKPVLRLY 553
                 ********************************************* PP

>> DUF569  Domain of unknown function (DUF569)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   2.3e-06     0.021      31     113 ..     457     540 ..     444     549 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.3e-06
      DUF569  31 qdrdGsakrakwtvevvekkaelirlkscyGkyltasnkplllGmtGkkvvq.tkparldsstewepvregskvklktrygkyl 113
                 + ++ s k a+wtv+ +  +a++++l           +++++lG+ G k    ++ ++l  s  w  vr  + + lk   gky+
  KHJ34659.1 457 EMKNNSCKLARWTVQSIMARADVMKLGFVSRANPKVNDRHVILGVIGWKPRDfAQQMNLSLSNGWGIVRTIADMCLKREEGKYV 540
                 557788899******************999999999***********99875266778***********************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       412  (0.0229795); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 4419.59
//
Query:       KHJ34660.1  [L=437]
Description: putative uncharacterized serine-rich protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.4e-69  231.9   0.6    7.4e-69  231.9   0.6    1.4  2  Glyco_hydro_cc  Glycosyl hydrolase catalytic core
  ------ inclusion threshold ------
        2.5    7.1   7.8        3.6    6.6   7.8    1.3  1  Roughex         Drosophila roughex protein


Domain annotation for each model (and alignments):
>> Glyco_hydro_cc  Glycosyl hydrolase catalytic core
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.2      0.71   6.4e+03      77      97 ..     144     164 ..     143     170 .. 0.80
   2 !  231.9   0.6   8.3e-73   7.4e-69       1     239 []     212     433 ..     212     433 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 0.71
  Glyco_hydro_cc  77 PDlksqsnmspeeAaklwkql 97 
                     P++ks +n +p  Aa++  ++
      KHJ34660.1 144 PEVKSTANAKPTLAATTVSTQ 164
                     889999999999999876665 PP

  == domain 2  score: 231.9 bits;  conditional E-value: 8.3e-73
  Glyco_hydro_cc   1 GlaynadasddkllsaksskisWyYnwsskpsselssaalefvPmlwgaksadtdalanvksaakenskylLgFNePDlksqsnmspeeAaklwk 95 
                     G+ayn d+++ + + a+ssk+sW+Ynw+s     + ++++efvPmlwg++  ++++++n++sa +++s++lL+FNePDl  qs+++++eA++ ++
      KHJ34660.1 212 GIAYN-DVNKLSAF-ASSSKVSWAYNWGSST--PNIPNNIEFVPMLWGTGAHSDKWTENANSAIASGSTHLLAFNEPDLGAQSSLTVAEAVAGYQ 302
                     78898.77777777.99***********944..5555569******************************************************* PP

  Glyco_hydro_cc  96 qliqplre.kgvklvsPavaatnseegleWldeFleacskdckvdflavHwYkgd.feelkehieelheayn.kpiWvTEfalqsesgdasqeet 187
                     ql+qp    +++kl+sPav++ +s++gl++ld+F+++c+ +c++df+a+HwY+g  ++++k++++++h++ + +p+W+TEf     ++++++ ++
      KHJ34660.1 303 QLMQP--FaGKAKLGSPAVTNGASPMGLSYLDNFISTCT-GCTIDFVAIHWYNGGnADDFKNYVTKAHAFGGgRPVWITEF-----EASGDAGQQ 389
                     *****..669*********66666***************.************7777***********98888*********.....6999***** PP

  Glyco_hydro_cc 188 keflnevlawldsqeyVeryawfgfrsevsnvgannaLldenG.eltelgsaY 239
                     ++fln+vl+wldsqeyVerya+f+         ++ +L+++ G +l++lg+a+
      KHJ34660.1 390 QAFLNDVLPWLDSQEYVERYAYFM--------ASDGNLISS-GtTLSSLGQAF 433
                     ************************........888999995.55999999986 PP

>> Roughex  Drosophila roughex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   7.8    0.0004       3.6     267     311 ..      90     138 ..      82     187 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0004
     Roughex 267 ddasepdlpdqnkeedkd.eqeqqa...eqeeqaqqqaeeapvssdist 311
                 + as   l d + ee+ d e+eqq    ++eeq+ +q++eapv   i t
  KHJ34660.1  90 NVASISALHDVQPEENSDeEPEQQNgevPDEEQDGEQPDEAPVDEPILT 138
                 567888999*9*9999997788875333789**********98654443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       572  (0.0319036); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 3234.55
//
Query:       KHJ34661.1  [L=359]
Description: putative bzip-type transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00018   21.5  11.2    0.00055   20.0  11.2    1.8  1  bZIP_1          bZIP transcription factor
  ------ inclusion threshold ------
      0.058   14.1   2.7       0.13   12.9   2.7    1.6  1  RBR             RNA binding Region
      0.095   12.9   1.5       0.22   11.8   1.5    1.6  1  HALZ            Homeobox associated leucine zipper
       0.39   10.8   0.1       0.39   10.8   0.1    2.5  2  NYD-SP28_assoc  Sperm tail C-terminal domain
       0.72   10.0  11.3       0.39   10.8   8.0    2.0  2  bZIP_2          Basic region leucine zipper


Domain annotation for each model (and alignments):
>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0  11.2   1.5e-07   0.00055       7      61 ..      69     123 ..      67     126 .. 0.93

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 1.5e-07
                 XXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   7 ekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekLks 61 
                 ++r + NR a+r  R+RK+ +i++Le++v  L+   ++     + +++e+  Lk 
  KHJ34661.1  69 TRRQELNRQAQRTHRERKELYIKNLEQEVLRLKDSFSKICRDKDAIEEENRRLKA 123
                 79********************************999999999999999999986 PP

>> RBR  RNA binding Region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   2.7   3.7e-05      0.13      23      49 ..      43      65 ..      22      73 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 3.7e-05
         RBR 23 asekaaaaakneppkipKKRGpKPGsK 49
                + +k a+        +pKKRGpKP sK
  KHJ34661.1 43 KEKKLAT----VDGQPPKKRGPKPDSK 65
                4444433....33379********998 PP

>> HALZ  Homeobox associated leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.5     6e-05      0.22       1      33 [.      91     123 ..      91     127 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 6e-05
        HALZ   1 KQLErDYdvLKasYdaLksdydsLkkenekLka 33 
                 K LE++   LK s+ +   d d++++en++Lka
  KHJ34661.1  91 KNLEQEVLRLKDSFSKICRDKDAIEEENRRLKA 123
                 77999999***********************98 PP

>> NYD-SP28_assoc  Sperm tail C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   3.0      0.77   2.8e+03      32      53 ..      68      90 ..      66      98 .. 0.83
   2 ?   10.8   0.1   0.00011      0.39      36      59 ..     105     128 ..      96     128 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.77
  NYD-SP28_assoc 32 LteRaklieetesLekqNeeL.r 53
                    Lt+R++l ++ +  +++ +eL  
      KHJ34661.1 68 LTRRQELNRQAQRTHRERKELyI 90
                    99*********999999999953 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00011
  NYD-SP28_assoc  36 aklieetesLekqNeeLrnlLkqy 59 
                     +k++++ +++e++N  L+ +L+qy
      KHJ34661.1 105 SKICRDKDAIEEENRRLKAILNQY 128
                     589999*****************9 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   8.0   0.00011      0.39       5      39 ..      67     102 ..      63     117 .. 0.89
   2 ?   -0.3   0.2      0.33   1.2e+03      37      50 ..     114     127 ..     107     129 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00011
                 XXXXXX.XXXXXXXX-HHHHHHHHHHHHHHHHHHHH CS
      bZIP_2   5 yrerRr.kNreAarrsRekkkakeeeleervkeLee 39 
                 +  rR   Nr+A r+ Re+k ++ ++le++v +L+ 
  KHJ34661.1  67 ALTRRQeLNRQAQRTHRERKELYIKNLEQEVLRLKD 102
                 5679999**************************986 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.33
                 HHHHHHHHHHHHHH CS
      bZIP_2  37 LeeeNaqLrqkveq 50 
                  eeeN +L++ + q
  KHJ34661.1 114 IEEENRRLKAILNQ 127
                 58999999887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (359 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       805  (0.0448993); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.55u 0.21s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 2715.93
//
Query:       KHJ34662.1  [L=280]
Description: hypothetical protein EV44_g0486 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       285  (0.015896); expected 358.6 (0.02)
Passed bias filter:                      166  (0.00925874); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 2009.95
//
Query:       KHJ34663.1  [L=787]
Description: putative dynamin central region [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   1.7e-110  368.7   0.0   4.1e-110  367.5   0.0    1.7  1  Dynamin_M  Dynamin central region
    1.1e-57  194.7   3.8    4.6e-56  189.5   0.0    2.8  3  Dynamin_N  Dynamin family
    2.9e-31  107.5   2.8    8.8e-31  105.9   2.8    1.9  1  GED        Dynamin GTPase effector domain
    8.3e-05   22.6   0.3     0.0016   18.5   0.3    2.6  1  MMR_HSR1   50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> Dynamin_M  Dynamin central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  367.5   0.0  9.1e-114  4.1e-110       1     284 [.     228     514 ..     228     515 .. 0.97

  Alignments for each domain:
  == domain 1  score: 367.5 bits;  conditional E-value: 9.1e-114
   Dynamin_M   1 vvdilenkvipLklGYvgVvnRsqkdInkkksieealkkEkaFFeshpayrkladkaGtpyLakkLnqiLvehIrkslPelkkkineklqklekeleel 99 
                 ++dil+++v+pLklG++gVvnRsq+dI+++ks+eealk+E++FF++hpayr++a+++Gt++Lak Ln++L+ hIr+ lP++k+++n+++ ++++el+ +
  KHJ34663.1 228 AMDILSGRVYPLKLGFIGVVNRSQQDIQGNKSLEEALKAESSFFKHHPAYRNIASRCGTQFLAKSLNTTLMAHIRERLPDIKARLNTLMGQTQQELAGY 326
                 79************************************************************************************************* PP

   Dynamin_M 100 geskpsde.ektklllqlitkfkedfkklieGese.vstkelsggarireiFnetlekslekidpleelsdeeirtairnsrGrelplfvpekaFealv 196
                 g+   s + ++++l+lql+t f+++f ++i+G+s+ +stkel+ggari++iFn+++++sle+idp+ +ls  +irtairns+G++++lfvpe aF+ lv
  KHJ34663.1 327 GDMHFSGKeHRGSLVLQLMTRFASSFISSIDGTSTdISTKELCGGARIYYIFNSVFGNSLESIDPTTNLSALDIRTAIRNSTGPRPSLFVPELAFDLLV 425
                 *55444445************************66589************************************************************* PP

   Dynamin_M 197 kkqikkleepalkcvelVyeelekiveklek.elkrFpnLreeikevvedllreqeeptkemienliemelayintnhpdfigalkair 284
                 k+qik le p+++cvelVyeel+ki++++ + el+rFp+L++++ evv+dllre++ p+ +++e+li++++ayintnhp+f+ga++a++
  KHJ34663.1 426 KPQIKLLEIPSQRCVELVYEELIKICHTCGStELTRFPRLQAKLIEVVSDLLRERLGPASSYVESLISIQRAYINTNHPNFLGAAAAMS 514
                 ****************************9999*****************************************************9997 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  189.5   0.0     1e-59   4.6e-56       1     168 []      33     219 ..      33     219 .. 0.96
   2 !    4.1   2.0    0.0099        45      37      98 ..     516     577 ..     485     581 .. 0.72
   3 ?   -3.5   0.0       2.1   9.5e+03      13      80 ..     607     670 ..     607     677 .. 0.63

  Alignments for each domain:
  == domain 1  score: 189.5 bits;  conditional E-value: 1e-59
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS---S-EEEEE......CCT---CCS...SSEEEE....T-EB--CHHHHHHHHHHHHHHHTSSSS--SS CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnptTrrplelql......geeeeaseravkeelkek....ekkledfsevreeieketekiagankgiskk 89 
                 i+vvGsqSsGKSSvl++++g+d+lprg++++Trrpl+lql      ++ ++a   + ++e+ e+    ++++++f +v++eie+et++iag+nkgi+++
  KHJ34663.1  33 IVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLinilpdEDAPDAI-VSTQAEWAEFhhipNRRFTEFHDVKREIENETARIAGNNKGINRH 130
                 89**************************************9888865555544.6888999999999******************************** PP

                 -EEEEEEETTS-SEEEEE---B-SSSGTTS.........HHHHHHH.STTEEEEEEEETTS-CCC-CHHHHHHHHSTTBTTEEEEEE-C CS
   Dynamin_N  90 villkilsllvkgltlvDlPGldsvnkrdq.........elvkeyi.kkadiilavtsanhdlsnsealflarevdpkgkrtivvltkl 168
                 +i+lki+s++v  ltlvDlPGl++v+ +dq         +l+ eyi k+++iilav++an+d+ nseal+lar+vdp g+rti+vltk+
  KHJ34663.1 131 PINLKIYSPHVLSLTLVDLPGLTKVPIGDQptdiekqtrNLISEYIaKPNSIILAVSPANVDIVNSEALKLARHVDPLGRRTIGVLTKI 219
                 ***************************************************************************************95 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.0099
                 EEEECCT---CCS...SSEEEE..T-EB--CHHHHHHHHHHHHHHHTSSSS--SS-EEEEEEET CS
   Dynamin_N  37 elqlgeeeeaseravkeelkek..ekkledfsevreeieketekiagankgiskkvillkilsl 98 
                 +++ +++ e + ++ ++e +e+  +k+l+++   ++ i +e e+ ++a k+ s+k+i+++  sl
  KHJ34663.1 516 VVTNKQDRE-R-KKLIQEERERreKKRLKEYASNENSIPEEIEEEEEAEKKSSRKPIHISSRSL 577
                 444444444.2.3444444444669999999999999999999999999999999999887765 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 2.1
                 HHHHHHHTS--S---SSS---S-EEEEECCT---CCS...SSEEEET-EB--CHHHHHHHHHHHHHHH CS
   Dynamin_N  13 SvlnaLlgedilprgpnptTrrplelqlgeeeeaseravkeelkekekkledfsevreeieketekia 80 
                 S+ln   g+d   +  ++ T  +    lg++ +  ++++ +  ++ ++ +e +s+   +++++ ++++
  KHJ34663.1 607 SFLNYFFGKD--GTPGGMATPSMHNANLGRNVS--QSTEPIFSQSMRRPEERISHGSLTQQQRDDEVN 670
                 6778777777..555566666666666666555..334555555557777777777777777766666 PP

>> GED  Dynamin GTPase effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.9   2.8     2e-34   8.8e-31       1      92 []     694     785 ..     694     785 .. 0.98

  Alignments for each domain:
  == domain 1  score: 105.9 bits;  conditional E-value: 2e-34
                 XXXXXTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCCCCHHHCCTTSGGGHHHHT---SCHCCCCHHHHHHHHHHHHHCCCCCHH CS
         GED   1 reeseveeirslvksYfnivrktiadqiPkaimhllvneakeslqkellakLykkedldeLLkEdeeiaekRkelkkrlealkkAreilsev 92 
                 re++e+e ir l++sYfnivr++iadq+Pka+mhllvn++k+ +q++l+++Ly++e+++eLL Ed++++++R++++k l+++++A +i+ ev
  KHJ34663.1 694 REAMETELIRALISSYFNIVRESIADQVPKAVMHLLVNHSKDVVQNRLVSELYREEMFEELLYEDDAVKKEREKCEKLLRTYREAAKIIGEV 785
                 5899*************************************************************************************986 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.3   3.5e-07    0.0016       1     100 [.      32     201 ..      32     218 .. 0.71

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 3.5e-07
                 EEEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEE...ETTEE................................................. CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvk...lkgke................................................. 47 
                 ++++vG   +GKS+++  ++g+         +Tr +   ++        +                                                 
  KHJ34663.1  32 QIVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLInilP---Dedapdaivstqaewaefhhipnrrftefhdvkreienetariagnnkgi 127
                 589*******************999999999999997766653431...1245678888889999999999999999999999999************* PP

                 ................EEEEECGGC...........SSHHHHHHHHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHHHHH CS
    MMR_HSR1  48 ................ielvDtpGl...........iegaseekglgkaflaleeadlillvvdaseeklkpldeeleel 100
                                 ++lvD+pGl           i  +++ ++l  ++ a+ + ++il v  a+   ++ +++e  +l
  KHJ34663.1 128 nrhpinlkiysphvlsLTLVDLPGLtkvpigdqptdI--EKQTRNLISEYIAKPN-SIILAVSPAN---VDIVNSEALKL 201
                 ************************8444422222111..2333355555554332.4444444433...44444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (787 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1373  (0.0765798); expected 358.6 (0.02)
Passed bias filter:                      751  (0.0418874); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.77u 0.28s 00:00:01.05 Elapsed: 00:00:00.43
# Mc/sec: 5537.91
//
Query:       KHJ34664.1  [L=297]
Description: hypothetical protein EV44_g3392 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (297 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2346.00
//
Query:       KHJ34665.1  [L=139]
Description: hypothetical protein EV44_g3961 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (139 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       322  (0.0179597); expected 358.6 (0.02)
Passed bias filter:                      252  (0.0140554); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1043.24
//
Query:       KHJ34666.1  [L=605]
Description: hypothetical protein EV44_g6373 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       661  (0.0368676); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.22s 00:00:00.78 Elapsed: 00:00:00.37
# Mc/sec: 4865.67
//
Query:       KHJ34667.1  [L=657]
Description: hypothetical protein EV44_g3790 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.1e-06   26.2   0.0      2e-05   24.8   0.0    1.7  1  rve       Integrase core domain


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   1.1e-09     2e-05       5      84 ..      29     105 ..      27     121 .. 0.89

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 1.1e-09
         rve   5 gelwqvDvtvvripdgggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafr 84 
                 + ++ +D++++   ++g+   +l+++d ++r+  +e+l +e++++++ +l  + ++ + g  p+++++D g+ +tsk+++
  KHJ34667.1  29 NAVIIADIFYIT--ENGKAQPVLHILDEATRFQNGEFLEKETSQEVWEKLRMCWIDAYVGP-PDTIVTDAGKNFTSKELQ 105
                 567788999999..555579999*********************************99999.***************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (657 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       909  (0.0507); expected 358.6 (0.02)
Passed bias filter:                      593  (0.0330749); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.30s 00:00:00.92 Elapsed: 00:00:00.45
# Mc/sec: 4365.22
//
Query:       KHJ34668.1  [L=391]
Description: putative pci domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.9e-14   52.5   0.5      2e-13   50.7   0.5    2.0  1  PCI            PCI domain
    7.7e-12   44.7   0.5    1.9e-11   43.4   0.5    1.8  1  eIF3m_C_helix  eIF3 subunit M, C-terminal helix


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.5   2.3e-17     2e-13       5     104 ..     249     347 ..     245     348 .. 0.96

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 2.3e-17
                 HHHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH..CESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTTTEE CS
         PCI   5 dllkalrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvsk..iyssislerlaklldlsvdevEkilvklIrdgeirakidqesgiv 101
                 +ll+++  ++l++++ + +++ + ++++ +  q  ++Le+k+r+ +l +++   + + i++  +ak l+++ ++vE +++++Ir g+i++k++q+++++
  KHJ34668.1 249 ELLSIFSQKELEDYNDFREEH-KGWIEQNEFDQ--SKLERKMRLLTLASLAAsiSSREIEYNNIAKVLQIPMKDVEMWVIDVIRAGLIEGKLSQKKQVL 344
                 89*******************.***********..**************999999999***************************************** PP

                 EEC CS
         PCI 102 vfk 104
                  ++
  KHJ34668.1 345 LVH 347
                 997 PP

>> eIF3m_C_helix  eIF3 subunit M, C-terminal helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   0.5   2.1e-15   1.9e-11       1      29 []     352     380 ..     352     380 .. 0.96

  Alignments for each domain:
  == domain 1  score: 43.4 bits;  conditional E-value: 2.1e-15
  eIF3m_C_helix   1 RvFGkeQWqeLetrLdaWksnLanVleVi 29 
                    RvFG++QW+e++t+Ld+Wk++L+ ++e i
     KHJ34668.1 352 RVFGEKQWREVATKLDQWKESLKAIKEII 380
                    9***********************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       801  (0.0446762); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2971.09
//
Query:       KHJ34669.1  [L=337]
Description: hypothetical protein EV44_g5753 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2636.85
//
Query:       KHJ34670.1  [L=205]
Description: putative rho3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.9e-55  186.9   0.0    2.2e-55  186.7   0.0    1.0  1  Ras          Ras family
    1.8e-22   79.8   0.0    2.9e-22   79.1   0.0    1.3  1  Roc          Ras of Complex, Roc, domain of DAPkinase
    6.1e-10   38.8   0.0    8.9e-10   38.3   0.0    1.2  1  Arf          ADP-ribosylation factor family
    0.00019   20.9   0.0    0.00028   20.4   0.0    1.2  1  SRPRB        Signal recognition particle receptor beta subuni
     0.0019   17.6   0.0     0.0023   17.4   0.0    1.2  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
     0.0019   17.4   0.0     0.0035   16.6   0.0    1.4  1  G-alpha      G-protein alpha subunit
  ------ inclusion threshold ------
      0.012   15.7   0.0      0.018   15.2   0.0    1.4  1  MMR_HSR1     50S ribosome-binding GTPase
      0.032   14.8   0.0      0.048   14.2   0.0    1.5  1  ABC_tran     ABC transporter
      0.048   12.8   0.1        0.3   10.2   0.0    1.9  2  NB-ARC       NB-ARC domain
       0.12   12.2   0.0        8.9    6.2   0.0    2.3  2  RsgA_GTPase  RsgA GTPase
       0.15   12.4   0.1       0.18   12.1   0.1    1.5  1  AAA_16       AAA ATPase domain


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.7   0.0   1.3e-58   2.2e-55       1     161 [.      14     189 ..      14     190 .. 0.98

  Alignments for each domain:
  == domain 1  score: 186.7 bits;  conditional E-value: 1.3e-58
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHH.HHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvk.kwveeik 98 
                 Klvl+Gd+a+GKtsll+ f++++F++ ye+T+ +++y+++i vd+ +++l++wDTAGqeef++lr+l+y d+++i+l+++++sr+s+env+ kwv+ei 
  KHJ34670.1  14 KLVLLGDGACGKTSLLNVFTRGYFPTVYEPTV-FENYVHDIYVDNVHIELSLWDTAGQEEFDRLRSLSYDDTHAIMLCFSVDSRDSLENVEsKWVREIA 111
                 99******************************.**********************************************************9******* PP

                 HHSTTTSEEEEEEETTTGGG...............G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHHHH CS
         Ras  99 rvaeenvpivLvGnKvDlee...............kravsteegeelakelg.lkfletSAktnenveeafeellreil 161
                 + ++  v++vLv+ K+Dl+e               k+++++++g ++a++++ l++le+SA  n +v+e+f+e++r +l
  KHJ34670.1 112 ENCQ-GVNLVLVALKCDLREqndddpqdggetrekKETINYDQGLTVARRINaLRYLECSAMRNRGVNEVFTEAARVAL 189
                 ****.7****************************99****************9*********************99765 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.1   0.0   1.8e-25   2.9e-22       1     120 []      14     128 ..      14     128 .. 0.87

  Alignments for each domain:
  == domain 1  score: 79.1 bits;  conditional E-value: 1.8e-25
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE..GHHH.HCH. CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd..srss.enl. 95 
                 K+vl+Gd++ GKtsll+ f+++ f + +++t+  ++++  +  +++        +++l++WDtaGqe+f+ l++l + + ++++l++   sr+s en+ 
  KHJ34670.1  14 KLVLLGDGACGKTSLLNVFTRGYFPTVYEPTVFENYVHDIY--VDN-------VHIELSLWDTAGQEEFDRLRSLSYDDTHAIMLCFSvdSRDSlENVe 103
                 99******************************999977543..332.......3699****************************98643554447773 PP

                 HHHHHHHHHHCSSS-EEEEEE-TTT CS
         Roc  96 keWlkelkkvagkspvilvgnkiDl 120
                 ++W++e+ ++++  +++lv+ k+Dl
  KHJ34670.1 104 SKWVREIAENCQGVNLVLVALKCDL 128
                 58*********************95 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.3   0.0   5.5e-13   8.9e-10      13     168 ..      11     181 ..       4     187 .. 0.74

  Alignments for each domain:
  == domain 1  score: 38.3 bits;  conditional E-value: 5.5e-13
                 TEEEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSSEE.EEEEEETTE..EEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHH CS
         Arf  13 kelrilllGLDnaGKtTilkklkleelvt.tvPTigfn.veeleiknl..kftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeLkal 107
                  + +++llG  + GKt +l+ ++ + + t   PT+  n v+++ + n+  ++++wD  Gqe+  +l +  +++t+a++ +  +  r+ le+ +++  + 
  KHJ34670.1  11 ASRKLVLLGDGACGKTSLLNVFTRGYFPTvYEPTVFENyVHDIYVDNVhiELSLWDTAGQEEFDRLRSLSYDDTHAIMLCFSVDSRDSLENVESKWVRE 109
                 56799****99****************98578**98775899999886225789**********************99887777778899988887766 PP

                 CTSGCCTTSEEEEEEE-TTSTTSS-HH.....HHHHHTTGGG.......SS...SSSSEEEEEEBTTTTBTHHHHH CS
         Arf 108 leeeelkevallvlaNKqDlpealsee.....elrellglee.......lk...gkrkleiqkcsavkgeglkegl 168
                 ++ e+ + v l+++a K Dl+e+ +++     e re+    e       l+     + l   +csa++++g++e +
  KHJ34670.1 110 IA-ENCQGVNLVLVALKCDLREQNDDDpqdggETREKK---EtinydqgLTvarRINALRYLECSAMRNRGVNEVF 181
                 65.5789*************988765411111222222...13334556442123334556678888888888766 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   1.7e-07   0.00028       3     103 ..      12     118 ..      10     128 .. 0.78

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 1.7e-07
                 --EEEEE-STTSSHHHHHHHHHHSS---B---S..S-EEETTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEET.....TS-HHHHHH CS
       SRPRB   3 kpavllvGlsdsGKTslftrLttdsvkktvtSq..essaalkvksekgskltliDfPGheklrqklleklkaksslkglvfvvDS.....tidpkevke 94 
                 +++++l+G   +GKTsl++  t + + + +     e+ + + + ++ + +l l D  G+e++  +l     + +++  l f vDS      +++k v+e
  KHJ34670.1  12 SRKLVLLGDGACGKTSLLNVFTRGYFPTVYEPTvfENYVHDIYVDNVHIELSLWDTAGQEEFD-RLRSLSYDDTHAIMLCFSVDSrdsleNVESKWVRE 109
                 67899*******************554444332338899888999999************994.34444447788999******955555599999999 PP

                 HHHHHHHHH CS
       SRPRB  95 vAEllyeil 103
                 +AE    + 
  KHJ34670.1 110 IAENCQGVN 118
                 999766665 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.0   1.4e-06    0.0023       1     124 [.      14     129 ..      14     172 .. 0.68

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1.4e-06
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedletlk 99 
                 k++L+G +  GKts+ ++    y ++          v+   v  + +++l+lwD  Gqe+f        ++  + +  +++  f v+sr+  e++e  +
  KHJ34670.1  14 KLVLLGDGACGKTSLLNVFTRGYFPTVYEPTVFENYVHDIYV-DNVHIELSLWDTAGQEEFDRL-----RSLSYDDTHAIMLCFSVDSRDSLENVE--S 104
                 899****************9***9985544444333433333.455799*********998554.....444455555566666666555444443..3 PP

   Gtr1_RagA 100 eilealrqyspeakvfvlihKmDli 124
                 + ++++ ++ + +++     K+Dl 
  KHJ34670.1 105 KWVREIAENCQGVNLVLVALKCDLR 129
                 5566666666666666666666665 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   2.2e-06    0.0035      21      75 ..      10      62 ..       5     165 .. 0.71

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 2.2e-06
                ..EEEEEEEESTTSSHHHHHHHHHHHCS----HHHHHCCHHHHHHHHHHHHHHHH CS
     G-alpha 21 krevkllllGqseSGKsTilkqlkllykkgfseeelatwraviqlnivrsiktil 75
                +   kl+llG + +GK+++l+ + + y +++ e  +  + ++++   v++++  l
  KHJ34670.1 10 SASRKLVLLGDGACGKTSLLNVFTRGYFPTVYEPTV--FENYVHDIYVDNVHIEL 62
                33458**********************999888844..44444444444444443 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   1.1e-05     0.018       2      94 ..      15     103 ..      14     154 .. 0.61

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.1e-05
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETT..EEEEEEECGGCSSHHHHHHHHHHHHH.HHHCTSEEEEEEETTTTCSHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkg..keielvDtpGliegaseekglgkafl.aleeadlillvvdaseeklkpld 94 
                  +++G    GK++L+n  t+    +  +p +  + ++  +  ++   e+ l+Dt+G  e    e +  +++  +   a ++++ vd++ ++l++++
  KHJ34670.1  15 LVLLGDGACGKTSLLNVFTRGYFPTVYEPTVFENYVHDIYV-DNvhIELSLWDTAG-QE----EFDRLRSLSyDDTHAIMLCFSVDSR-DSLENVE 103
                 57899999************966666666555555444333.2223889*******.44....3322222220223355666666644.3233322 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0     3e-05     0.048      10      38 ..      11      39 ..       7     134 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3e-05
                TTSEEEEEESTTSSHHHHHHHHTTSS--S CS
                xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 10 egekvaivGenGaGKStLlkllagllkpt 38
                +++k++++G+  +GK++Ll+++++ + pt
  KHJ34670.1 11 ASRKLVLLGDGACGKTSLLNVFTRGYFPT 39
                67899******************999885 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.22   3.6e+02      23      38 ..      15      30 ..       7      37 .. 0.81
   2 ?   10.2   0.0   0.00018       0.3     149     204 ..      70     124 ..      62     133 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.22
                EEEEESTTSSHHHHHH CS
      NB-ARC 23 valvGmgGvGKttlak 38
                + l G g +GKt l++
  KHJ34670.1 15 LVLLGDGACGKTSLLN 30
                6789********9975 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00018
                 S-EEEEEESS--HHHHHHHHHHCCTS-GGCHH..CHHHHHHHHHHCTT-HHHHHHH CS
      NB-ARC 149 atsekievelLekdeawellenkvfekkleekesleevakeivekckGlPlalkvl 204
                 + +e+ ++++L+ d+   ++  + ++ +++ ++++ +  +ei+e+c+G  l+l++l
  KHJ34670.1  70 Q-EEFDRLRSLSYDDTHAIMLCFSVDSRDSLENVESKWVREIAENCQGVNLVLVAL 124
                 3.788899**********9999999999998889*****************99887 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0055       8.9      99     120 ..      12      33 ..       7      43 .. 0.86
   2 ?    3.6   0.0     0.034        55      19      82 ..      87     156 ..      82     177 .. 0.70

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0055
                  TSEEEEECSTTSSHHHHHHHHC CS
  RsgA_GTPase  99 dktsvlvGqSGvGKStLinall 120
                  ++  vl+G    GK++L+n+++
   KHJ34670.1  12 SRKLVLLGDGACGKTSLLNVFT 33 
                  57789**************875 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.034
                  EEEEEESTTTT--HHHHHHHHHHHHH..TT-EEEEEEE-GGG--HHH....HHHHHHHHHHHTTSEEEE- CS
  RsgA_GTPase  19 llivvslkepelslnlldrfLvlaee..kgiepvivlnKiDlleeee....eleelkeelealgyevllv 82 
                  +++++s+++ +  +n  ++ + ++ e  +g+++v+v  K+Dl e+++    +  e++e+ e+++y+  l+
   KHJ34670.1  87 IMLCFSVDSRDSLENVESKWVREIAEncQGVNLVLVALKCDLREQNDddpqDGGETREKKETINYDQGLT 156
                  566677776666666666666554432268999*********9999877776667777777777776555 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   0.00011      0.18      25      47 ..      13      35 ..       3     186 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00011
      AAA_16 25 elvllsGesGvGKsslvrellra 47
                + ++l G+ ++GK+sl++ + r 
  KHJ34670.1 13 RKLVLLGDGACGKTSLLNVFTRG 35
                6689*************999873 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       523  (0.0291706); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 1471.04
//
Query:       KHJ34671.1  [L=330]
Description: putative nipsnap family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-37  127.5   0.1    2.8e-27   94.9   0.0    2.5  2  NIPSNAP   NIPSNAP


Domain annotation for each model (and alignments):
>> NIPSNAP  NIPSNAP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.0   2.5e-11   4.4e-07       4     100 ..     122     218 ..     118     220 .. 0.84
   2 !   94.9   0.0   1.6e-31   2.8e-27       1     102 []     231     328 ..     231     328 .. 0.99

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 2.5e-11
                 EEEEE-TT-HHHHHHHHHHTH..HHHHHHHH--EEEEEEEEESBSSEEEEEEEES-HHHHHHHHHHHHH-HHHHHHHHHHHTT..EEEEEEEEEEE-TT CS
     NIPSNAP   4 rtYtlkpgklaeflerfarei..iaiqekhggeliGyfaseiGalnqvlhlwaydslaarearraalaadpeweaavekavdldliksmesrilkptsf 100
                 + +++kp k+ e+ + +       a +++ ++ l+G + +e+G+ ++++h+w y+ +  + a  +  a++p+ +++ ++ +++  i s  s+++  +sf
  KHJ34671.1 122 VFHHVKPDKVDEYTKLVGGWYpkMASMADNKVHLVGSWRTEVGDCDTFIHIWEYQRYSGYHASLHSIASQPGLSDFDKNLKSI--IYSKRSSLMQEFSF 218
                 5688888888888665543221135677789******************************************9999999999..99999999988877 PP

  == domain 2  score: 94.9 bits;  conditional E-value: 1.6e-31
                 EEEEEEEE-TT-HHHHHHHHHHTHHHHHHHHH--EEEEEEEEESBSSEEEEEEEES-HHHHHHHHHHHHH-HHHHHHHHHHHTT..EEEEEEEEEEE-T CS
     NIPSNAP   1 yelrtYtlkpgklaeflerfareiiaiqekhggeliGyfaseiGalnqvlhlwaydslaarearraalaadpeweaavekavdldliksmesrilkpts 99 
                 +elr+Y lkpg+l e+ ++++r+ + + e  ++e +G+++++iG+ln+v+hlw++++l++r+ +r++++++ ew  ++ k+ +l  i+sm+sril+p +
  KHJ34671.1 231 FELRSYVLKPGNLLEWESHWRRGLAVRKE--NMEGVGAWFVQIGDLNTVHHLWQFADLEKRKIQREECWSKEEWGNTIFKTAPL--IQSMKSRILIPCE 325
                 59***************************..*****************************************************..************* PP

                 T-S CS
     NIPSNAP 100 fsp 102
                 +sp
  KHJ34671.1 326 WSP 328
                 **8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       664  (0.037035); expected 358.6 (0.02)
Passed bias filter:                      534  (0.0297841); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.21s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2561.66
//
Query:       KHJ34672.1  [L=146]
Description: hypothetical protein EV44_g0571 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       575  (0.0320709); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.20s 00:00:00.57 Elapsed: 00:00:00.35
# Mc/sec: 1255.48
//
Query:       KHJ34673.1  [L=346]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       794  (0.0442858); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 2927.99
//
Query:       KHJ34674.1  [L=489]
Description: putative tetratricopeptide repeat protein 15 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00011   22.6   0.1      0.027   15.0   0.0    2.9  3  TPR_19    Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.023   14.8   0.1          1    9.7   0.0    3.4  4  TPR_2     Tetratricopeptide repeat
       0.11   12.9   0.1       0.45   11.0   0.0    2.2  2  TPR_17    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.1   6.4e+03       3      15 ..     162     178 ..     160     220 .. 0.59
   2 !   15.0   0.0   4.5e-06     0.027       1      48 [.     313     359 ..     313     361 .. 0.93
   3 !    4.4   0.0    0.0093        56      30      55 ..     401     426 ..     391     429 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.1
      TPR_19   3 aegdyaeA....lalle 15 
                 ++g++ +A    ++ll+
  KHJ34674.1 162 KSGKFRDAaikaAQLLT 178
                 55555555333333333 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 4.5e-06
      TPR_19   1 llaegdyaeAlalleqalqedpknaearllLAeallalgqldeAealL 48 
                 l++++d++ A ++l+  lq +p+n++++++ A + l lg+++ A+ ++
  KHJ34674.1 313 LIEMEDFEGASRFLST-LQLSPNNPNLQYQKALLWLFLGDVEIARSCV 359
                 799*************.8**********************99998776 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.0093
      TPR_19  30 lLAeallalgqldeAealLdalpeed 55 
                 +LA  l+ +g +deA++++++l +e+
  KHJ34674.1 401 NLAVSLIYMGCIDEARKIMEKLVDEE 426
                 788999999999*****999998876 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.78   4.6e+03      12      24 ..     161     173 ..     160     180 .. 0.64
   2 ?   -2.3   0.0       1.1   6.8e+03      11      24 ..     313     326 ..     309     335 .. 0.59
   3 ?   -0.1   0.0      0.22   1.3e+03       3      23 ..     338     358 ..     336     360 .. 0.77
   4 ?    9.7   0.0   0.00017         1       2      28 ..     397     423 ..     396     426 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.78
       TPR_2  12 yklgdyeeAleaf 24 
                 +k+g++ +A+   
  KHJ34674.1 161 IKSGKFRDAAIKA 173
                 6889995555443 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.1
       TPR_2  11 yyklgdyeeAleaf 24 
                 ++++ d+e A +++
  KHJ34674.1 313 LIEMEDFEGASRFL 326
                 56666666665543 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.22
       TPR_2   3 alynlGlayyklgdyeeAlea 23 
                 + y+ +l+++ lgd e A+ +
  KHJ34674.1 338 LQYQKALLWLFLGDVEIARSC 358
                 568888888899999888877 PP

  == domain 4  score: 9.7 bits;  conditional E-value: 0.00017
       TPR_2   2 ealynlGlayyklgdyeeAleafekAl 28 
                  +  nl+ +++++g  +eA++ +ek +
  KHJ34674.1 397 LWKQNLAVSLIYMGCIDEARKIMEKLV 423
                 56679*****************99986 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   7.5e-05      0.45       6      33 ..     329     356 ..     325     357 .. 0.88
   2 ?   -3.1   0.0       2.4   1.5e+04      18      33 ..     401     416 ..     400     417 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 7.5e-05
      TPR_17   6 leldPnnadaynnLAelllknGdlmtAr 33 
                 l+l Pnn+++ +++A l+l +Gd + Ar
  KHJ34674.1 329 LQLSPNNPNLQYQKALLWLFLGDVEIAR 356
                 8899******************988765 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.4
      TPR_17  18 nLAelllknGdlmtAr 33 
                 nLA+ l   G  ++Ar
  KHJ34674.1 401 NLAVSLIYMGCIDEAR 416
                 7888777777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3584.43
//
Query:       KHJ34675.1  [L=421]
Description: hypothetical protein EV44_g6380 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.018   14.5   0.0      0.036   13.6   0.0    1.4  1  MA-Mit    Mycoplasma arthritidis-derived mitogen


Domain annotation for each model (and alignments):
>> MA-Mit  Mycoplasma arthritidis-derived mitogen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0     2e-06     0.036      45     136 ..      25     116 ..      19     140 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2e-06
      MA-Mit  45 evlklfklklnefyrhafnileeyeglekydeifkmmfl.klkvvldiqrkeannveqikrniaildeimkkadnelsyfvsqdkkfqelwdk 136
                   l+  k+ l +fy h ++ +e   g   y ++  ++f  k++ + d qr   +  eqik  +     i++k d  +s+ vs   +  +l +k
  KHJ34675.1  25 SRLRETKALLSQFYDHVLSPIE-APGKDSYGDLDILLFKpKISSLDDAQRSREDIAEQIKTILGAKAVIVRKGDPVISFAVSSPDNKCSLEEK 116
                 5567788899*********997.5899*****99999965899999***********************************987776666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       697  (0.0388756); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 3253.44
//
Query:       KHJ34676.1  [L=1217]
Description: putative stress response protein nst1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-60  204.7   3.5    1.4e-60  204.7   3.5    5.0  5  NST1      Salt tolerance down-regulator


Domain annotation for each model (and alignments):
>> NST1  Salt tolerance down-regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   5.6      0.26   4.7e+03      14      85 ..      54     125 ..       7     148 .. 0.54
   2 !  204.7   3.5   7.9e-65   1.4e-60      29     179 ..     168     307 ..     155     317 .. 0.81
   3 ?   -3.8   1.1      0.64   1.2e+04      91      91 ..     484     484 ..     429     516 .. 0.50
   4 ?  -12.1  27.0         1   1.8e+04      20     109 ..     547     634 ..     526     652 .. 0.43
   5 ?   -5.0  19.6         1   1.8e+04       6      85 ..     659     736 ..     643     746 .. 0.38

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.26
        NST1  14 qqqqdknevdeksqvesskrk.kkkkkkkknrsnsnnqneesstslstsksvaittssarsvknnppsvssaa 85 
                 q++++ n  + ++  ++     ++kk+k++++ +++ ++++++ s  + ++ ++++  +r +++ ++  ++++
  KHJ34676.1  54 QNSNHLNGKSLSAPITNGTPGvNRKKQKRREKEAAK-RAAATQLSNLHVSNGTASSDVQRQMQELEARFREHG 125
                 222222222222222222222022222222222222.222333333333333344444444444444444444 PP

  == domain 2  score: 204.7 bits;  conditional E-value: 7.9e-65
        NST1  29 esskrkkkkkkkkknrsnsnnqneesstslstsksvaittssarsvknnppsvssaalrsakkvskdrsiwntssqEereklkeFWlsLgEeERReLvk 127
                 +++++ kk kkkkk++s++    + s++ + +        s+++ ++ + p++ +++l + + +sk++ iwntssqEere++keFWlsLgE+ER++Lvk
  KHJ34676.1 168 NTNNSSKKSKKKKKSKSGQP---KGSDKAQYA-------RSMHNHIGLPIPHIGHTNLPQRQGISKEK-IWNTSSQEERERIKEFWLSLGEDERKSLVK 255
                 23333333333444444422...333333333.......357778888899999999***********.****************************** PP

        NST1 128 vEKeavLkKmKeqqKhsCsCsvCGRkRvaiEEELEvlYDaYYeeLeqYanmn 179
                 vEK+avLkKmKeqqKhsCsC+vCGRkR+aiEEELEvlYDaYYeeLeqYan++
  KHJ34676.1 256 VEKDAVLKKMKEQQKHSCSCTVCGRKRTAIEEELEVLYDAYYEELEQYANHQ 307
                 **************************************************97 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 0.64
        NST1  91 k 91 
                 +
  KHJ34676.1 484 E 484
                 1 PP

  == domain 4  score: -12.1 bits;  conditional E-value: 1
        NST1  20 nevdeksqvesskrkkkkkkkkknrsnsnnqneesstslstsksvaittssarsvknnppsvssaalrsakkvskdrsiwntssqEerek 109
                 +e++e+s+  +s+++ kk ++ ++r++   q++++  + +++++    ++ a     ++++ ++a +r+++k +k++   ++  +Eer++
  KHJ34676.1 547 EELEEESK-AKSEKQAKKARDAQKRKEKLAQKKQALAEEKAKRDAEEAEKLAALRLAEEKKAEEARIRAEEKRKKKE-AQRKAEEEERQR 634
                 12222221.22222222222222333333334444444444443333333333333344444555555555543333.444445556654 PP

  == domain 5  score: -5.0 bits;  conditional E-value: 1
        NST1   6 eensqeqqqqqqdknevdeksqvesskrkkkkkkkkknrsnsnnqneesstslstsksvaittssarsvknnppsvssaa 85 
                 e +++e+++++++++  +e ++v++ + ++++ k++++rs+s +     +++ +++++   t+ +++s + +p+  s+++
  KHJ34676.1 659 EAKEKERREKDEQRQREKEAKEVKEREARERRDKQERERSESLKAR--VDQQAKERRKREETAFQKESPQATPSPNSNTT 736
                 2222233333333333333333333333333333444444444333..33333332222222222222222222222233 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3454  (0.192649); expected 358.6 (0.02)
Passed bias filter:                      882  (0.049194); expected 358.6 (0.02)
Passed Vit filter:                       486  (0.0271069); expected 17.9 (0.001)
Passed Fwd filter:                       155  (0.00864521); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 3.35u 0.38s 00:00:03.73 Elapsed: 00:00:00.69
# Mc/sec: 5305.91
//
Query:       KHJ34677.1  [L=875]
Description: putative vacuolar protein sorting-associated protein 35 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.7e-303 1008.8  21.8     2e-303 1008.5  21.8    1.0  1  Vps35          Vacuolar protein sorting-associated protein 35
  ------ inclusion threshold ------
      0.043   13.8   0.2       0.38   10.8   0.0    2.7  3  Ribonuc_L-PSP  Endoribonuclease L-PSP
        1.5    9.4   5.0         16    6.1   0.1    4.6  4  RPAP3_C        Potential Monad-binding region of RPAP3


Domain annotation for each model (and alignments):
>> Vps35  Vacuolar protein sorting-associated protein 35
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ! 1008.5  21.8  3.3e-307    2e-303       1     730 []      13     836 ..      13     836 .. 0.96

  Alignments for each domain:
  == domain 1  score: 1008.5 bits;  conditional E-value: 3.3e-307
       Vps35   1 lLeealavvkeqsflmkralee.dklmdaLkhasnmlseLrtssLsPkqYYeLYmavfdeLrhLssyLkdehkkkkkkladLYelVQyagnivpRLYLl 98 
                 lLeeal vv++q++lm+++le+ +klmdaLkh+s+++seLrtssL PkqYYeLYmavfd+LrhLs yLkd+h+   ++ladLYelVQyagni+pRLYL+
  KHJ34677.1  13 LLEEALVVVRQQTHLMRKCLETpGKLMDALKHSSTLVSELRTSSLGPKQYYELYMAVFDALRHLSVYLKDSHPV--NHLADLYELVQYAGNIIPRLYLM 109
                 69********************9**************************************************9..569******************** PP

       Vps35  99 itvGtvyikskdapakeilkDlvEmcrGvQhPiRGLFLRyYLsqmtkdlLpdteseeeeeegelkdsieflltNFiEmnkLWvRlqhqghsrerekrek 197
                 itvGtvy++++dap+kei+kD++Em+rGvQhP+RGLFLRyY+s++++++Lp ++   +++eg+l+dsi+f ltNF+EmnkLWvRlqhqghsrere r++
  KHJ34677.1 110 ITVGTVYMSIEDAPVKEIMKDMMEMSRGVQHPVRGLFLRYYISGQAREHLPVGK--GDGPEGNLQDSISFTLTNFVEMNKLWVRLQHQGHSRERELRTQ 206
                 ****************************************************96..889**************************************** PP

       Vps35 198 eRkeLkiLVGsnLvrLsqLegvdlelYkekiLpkileqivqcrDvlaQeYLldviiqvFpdefhlatLdkllsailklnpkvnikeilisLidRLakya 296
                 eRkeL++LVGsnLvrLsqL  vdle+Y+++iL+++leq+vqcrDvlaQeYLl+vi+qvFpde+hl+tLd++l+a+++ln++vnik i+isL+dRL++ya
  KHJ34677.1 207 ERKELQLLVGSNLVRLSQL--VDLETYSTSILQPLLEQVVQCRDVLAQEYLLEVITQVFPDEYHLHTLDQFLAAVSRLNSNVNIKVIVISLMDRLSSYA 303
                 *******************..9***************************************************************************** PP

       Vps35 297 er................................................................................ekksevpedvdlfevfw 315
                 +r                                                                                +  +++p++++l+evf+
  KHJ34677.1 304 TResntlprkdleilekdalakllekvklsrdqkssketpfgsdseqilqaddnsfkldnkekqeseqavsdlkngasnqenTIGRGIPDNIKLYEVFF 402
                 *****************************************************************************9887655678899********* PP

       Vps35 316 eqleelvearpdlsledilallesllnlslklypdnlenvdkvlelaaeklkevel.eeleskeaeeellkLLlapikslksvltvlklenykellsll 413
                 +q+ +lv+a+ +l+++d++all+sl+nl+l++y+d+l++vd+vl++a++k+k+  + ++l+s+ea+++ll+LLlapi+s+ s++t+l+l+++ +l++++
  KHJ34677.1 403 DQVVNLVNAQ-HLTIQDTTALLVSLVNLALNIYRDRLDYVDQVLDYANQKVKQHANsADLHSHEAQKNLLNLLLAPISSYVSIFTALSLPTFIPLFNSQ 500
                 *******865.9****************************************9766899**************************************** PP

       Vps35 414 syktrkkvaleivdaileeketkietleevekllellsvlikdekd...............keeeefaeeqelvaklvhliknddldkqfklllllrkk 497
                  y+tr++va e+ +++ + + t+i+tl ++e +l +l+v+ik+ ++               +  +e+ eeq+++a++vhli++dd+d+q+kll+++++ 
  KHJ34677.1 501 IYSTRRAVASEVAQNLQR-NLTNISTLPQLECVLMILKVIIKEGNQqsagypgvqqrktleT--DETLEEQGWLARIVHLIHSDDNDTQYKLLQMTKNV 596
                 ****************97.67*********************88855778888876665422..68********************************* PP

       Vps35 498 llkggekrikytlpalitallklarklkklkkkekekkekleekvkklfkfihqliselvskae.aaelalklflqaalvadqleleeiayefftqaft 595
                 + +g+e r+k+t+p+lit+++klar++k+ ++     +e++++++++l+k +h+l+s+l+s+++ +ael+l+lf+ ++++adq++ eei+yeff+qaft
  KHJ34677.1 597 YAEGNE-RVKFTTPSLITSSMKLARRYKASENY----NETWKSQSSTLYKLMHSLLSNLYSRVPtSAELCLRLFVACGQIADQTNAEEISYEFFAQAFT 690
                 *99988.********************554443....679************************999******************************** PP

       Vps35 596 iYeesisdskaqlqaivliigtLqktrslseenyetLitkltlhaskLlkkkdqcravllcshLfw..........e.eeekyrdgkrvleCLqkslri 683
                 iYee+isds+aq+qa+++i+g+L++tr++++eny+tLitk++lh+skLlkk+dqcrav+l+shL+w          e e++ yrdgkrvleCLq++lr+
  KHJ34677.1 691 IYEEAISDSRAQFQAVCVIAGALHETRNFGKENYDTLITKCALHGSKLLKKPDQCRAVYLASHLWWavpiaargetEgEKDLYRDGKRVLECLQRALRV 789
                 ******************************************************************988888776533488****************** PP

       Vps35 684 AdsimdnavslelfveiLnkylyyfekgneevtekyingLieliken 730
                 Ad++md+avs+elfveiLn+y+yyf+++ne+vt+ky+ngLieli +n
  KHJ34677.1 790 ADACMDTAVSVELFVEILNRYVYYFDQQNEAVTTKYLNGLIELIYSN 836
                 ********************************************875 PP

>> Ribonuc_L-PSP  Endoribonuclease L-PSP
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.53   3.2e+03      83     118 ..     256     291 ..     243     294 .. 0.66
   2 ?   -3.0   0.0       1.1   6.8e+03      79      93 ..     685     699 ..     663     721 .. 0.49
   3 ?   10.8   0.0   6.3e-05      0.38      28      82 ..     759     813 ..     748     828 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.53
                    HHHHHHHSSSSTS--E..EEEEE-SBSGGG-SEEEEEE CS
  Ribonuc_L-PSP  83 nevyaeafdelkeaPa..rsaveVaaLpkgakvEIeai 118
                     ev++++f+++++ +   +++ +V++L+ +++  I++i
     KHJ34677.1 256 LEVITQVFPDEYHLHTldQFLAAVSRLNSNVN--IKVI 291
                    57889999988744442267777777775554..4444 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.1
                    HHHHHHHHHHHSSSS CS
  Ribonuc_L-PSP  79 faevnevyaeafdel 93 
                    fa+  ++y+ea+++ 
     KHJ34677.1 685 FAQAFTIYEEAISDS 699
                    333334444444433 PP

  == domain 3  score: 10.8 bits;  conditional E-value: 6.3e-05
                    SB-TTTSCB..-SSHHHHHHHHHHHHHHHHHHTT--GGGEEEEEEEESSGGGHHHH CS
  Ribonuc_L-PSP  28 pldpetgelv.egdveeqtrqalenlkavLaaagaslsdvVkvtvFladiedfaev 82 
                    p+ +  ge   e+d++   +++le+l+++L+ a+a ++  V v+ F++ ++++  +
     KHJ34677.1 759 PIAA-RGETEgEKDLYRDGKRVLECLQRALRVADACMDTAVSVELFVEILNRYVYY 813
                    6654.56666699**********************************988876544 PP

>> RPAP3_C  Potential Monad-binding region of RPAP3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.1    0.0027        16       3      77 ..     180     300 ..     178     305 .. 0.68
   2 ?   -1.4   0.1       0.6   3.6e+03      66      89 ..     513     536 ..     443     537 .. 0.54
   3 ?   -0.8   0.0      0.39   2.3e+03      17      35 ..     580     598 ..     573     652 .. 0.73
   4 ?    0.9   0.0      0.12     7e+02      38      76 ..     794     829 ..     777     843 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0027
     RPAP3_C   3 ktayeFeklwrklkredkdlkavllqinp................................................kqlpkiFknsledeilsdilda 53 
                 +++ e +klw +l+++ ++++++l  ++                                                 + + ++F ++ + ++l ++l a
  KHJ34677.1 180 TNFVEMNKLWVRLQHQGHSRERELRTQERkelqllvgsnlvrlsqlvdletystsilqplleqvvqcrdvlaqeyllEVITQVFPDEYHLHTLDQFLAA 278
                 799**********88888888877777775666666667777777777777777777777777777777777777777777777777777777777776 PP

     RPAP3_C  54 lnerlqeekaedsslvleiLdrLs 77 
                 ++    +   + +  v++ +drLs
  KHJ34677.1 279 VSRLNSNV--NIKVIVISLMDRLS 300
                 65544333..23456667777666 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.6
     RPAP3_C  66 sslvleiLdrLskvkRFdmlvmfl 89 
                  + + + L ++s++++ ++++m l
  KHJ34677.1 513 AQNLQRNLTNISTLPQLECVLMIL 536
                 134566677888888888888876 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.39
     RPAP3_C  17 redkdlkavllqinpkqlp 35 
                 ++d+d+++ llq+ ++ ++
  KHJ34677.1 580 SDDNDTQYKLLQMTKNVYA 598
                 6788888899998875544 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.12
     RPAP3_C  38 Fknsledeilsdild.alnerlqeekaedsslvleiLdrL 76 
                 +++ +++e++ +il+ ++ ++ q+++a     + ++L++L
  KHJ34677.1 794 MDTAVSVELFVEILNrYVYYFDQQNEA----VTTKYLNGL 829
                 567788999999998677777777543....456666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (875 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       797  (0.0444531); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.26s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 6030.23
//
Query:       KHJ34678.1  [L=198]
Description: putative gtp-binding protein rho2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.4e-47  160.1   0.0    3.9e-47  159.8   0.0    1.0  1  Ras        Ras family
    8.1e-20   71.2   0.0    1.4e-19   70.5   0.0    1.4  1  Roc        Ras of Complex, Roc, domain of DAPkinase
      1e-06   28.3   0.0    1.6e-06   27.7   0.0    1.3  1  Arf        ADP-ribosylation factor family
     0.0068   15.8   0.0     0.0099   15.3   0.0    1.3  1  SRPRB      Signal recognition particle receptor beta subunit
  ------ inclusion threshold ------
      0.017   14.8   0.0        1.3    8.7   0.0    2.4  2  PduV-EutP  Ethanolamine utilisation - propanediol utilisation
      0.028   13.8   0.0      0.033   13.6   0.0    1.3  1  Gtr1_RagA  Gtr1/RagA G protein conserved region
       0.15   12.1   0.0       0.28   11.3   0.0    1.5  1  MMR_HSR1   50S ribosome-binding GTPase
       0.22   11.3   0.1       0.31   10.8   0.1    1.3  1  AAA_21     AAA domain, putative AbiEii toxin, Type IV TA syst


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.8   0.0   1.8e-50   3.9e-47       1     160 [.      13     182 ..      13     184 .. 0.98

  Alignments for each domain:
  == domain 1  score: 159.8 bits;  conditional E-value: 1.8e-50
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHH.HHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvk.kwveeik 98 
                 Klv++Gd+a+GKtsll  f+ ++F++   +T+ +++y+++++vdgk+v+l +wDTAGqe++++lr+l y++a++il+ ++i+  +s+envk kwvee  
  KHJ34678.1  13 KLVIIGDGACGKTSLLSVFTLGYFPTV--PTV-FENYVTDCRVDGKNVQLALWDTAGQEDYERLRPLAYSKAHVILIGFSIDMPDSLENVKnKWVEEAL 108
                 9***********************986..***.**********************************************************9******* PP

                 HHSTTTSEEEEEEETTTGGG............G-SS-HHHHHHHHHHHT.SEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras  99 rvaeenvpivLvGnKvDlee............kravsteegeelakelg.lkfletSAktnenveeafeellrei 160
                 + ++ nvpi+LvG K Dl+e            ++ +st+e+ +++k++g  kfle+S  t e+v+++fe+++r++
  KHJ34678.1 109 DRCP-NVPIILVGLKKDLREdpiaieemrkrsQNFISTREAADVSKSIGaRKFLECSSLTGEGVDDVFEAATRAA 182
                 ****.7*******************************************899******************99976 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.5   0.0   6.1e-23   1.4e-19       1     119 [.      13     124 ..      13     125 .. 0.84

  Alignments for each domain:
  == domain 1  score: 70.5 bits;  conditional E-value: 6.1e-23
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCH. CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenl. 95 
                 K+v++Gd++ GKtsll+ f+ + f   + +t+  +++t  + +++        k+v+l++WDtaGqe+++ l+pl +++a+++++ +     +s en+ 
  KHJ34678.1  13 KLVIIGDGACGKTSLLSVFTLGYFP--TVPTVFENYVTD-C-RVD-------GKNVQLALWDTAGQEDYERLRPLAYSKAHVILIGFSidmPDSLENVk 100
                 99********************995..446776666654.3.333.......3689****************************988743544556763 PP

                 HHHHHHHHHHCSSS-EEEEEE-TT CS
         Roc  96 keWlkelkkvagkspvilvgnkiD 119
                 ++W++e  +++++ p+ilvg k D
  KHJ34678.1 101 NKWVEEALDRCPNVPIILVGLKKD 124
                 68********************99 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   7.2e-10   1.6e-06      15     169 ..      12     176 ..       2     181 .. 0.69

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 7.2e-10
                 EEEEEEESTTSSHHHHHHHHHHSSCEECSSSSSEEEEE...EEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEE..EEEETT-CTTHHHHHHHHHHHC CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvttvPTigfnvee...leiknlkftvwDvGGqeklRplWknYfektdavi..fvvDsadreRleeakeeLkall 108
                  +++++G  + GKt +l  ++l+ +  tvPT+  n  +   +  kn+++ +wD  Gqe   +l    ++k ++++  f +D  d+  le+ k++  +  
  KHJ34678.1  12 RKLVIIGDGACGKTSLLSVFTLGYFP-TVPTVFENYVTdcrVDGKNVQLALWDTAGQEDYERLRPLAYSKAHVILigFSIDMPDS--LENVKNKWVEE- 106
                 5899***999***********99875.68999887543333788*************9988887777777766553567776654..66666654332. PP

                 TSGCCTTSEEEEEEE-TTSTTS.S-HHHHHHHTTGGG........SS.SSSSEEEEEEBTTTTBTHHHHHH CS
         Arf 109 eeeelkevallvlaNKqDlpea.lseeelrellglee........lk.gkrkleiqkcsavkgeglkegle 169
                 + ++  +v++++++ K+Dl+e+ +  ee+r+  + +         ++ +    +  +cs ++geg+++ +e
  KHJ34678.1 107 ALDRCPNVPIILVGLKKDLREDpIAIEEMRKRSQ-NFistreaadVSkSIGARKFLECSSLTGEGVDDVFE 176
                 23566799***********986234444443322.221123344433333445677899999999988776 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   4.4e-06    0.0099       3      62 ..      11      70 ..       9     102 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 4.4e-06
                --EEEEE-STTSSHHHHHHHHHHSS---B---SS-EEETTG...GGTT-SEEEETT-GCC CS
       SRPRB  3 kpavllvGlsdsGKTslftrLttdsvkktvtSqessaalkvksekgskltliDfPGhekl 62
                +++++++G   +GKTsl+   t + + +  t  e+ +++   + k+ +l+l D  G+e  
  KHJ34678.1 11 RRKLVIIGDGACGKTSLLSVFTLGYFPTVPTVFENYVTDCRVDGKNVQLALWDTAGQEDY 70
                57899******************977666666699999988899999*******998764 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.0   0.00058       1.3       2      43 ..      12      50 ..      11      69 .. 0.79
   2 ?    3.8   0.0     0.019        43     111     139 ..     148     176 ..     122     179 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00058
   PduV-EutP  2 kkilliGkvgsGKttLtqalkgeelkYkktqaiefsdeviDt 43
                +k+++iG   +GKt+L       +l Y  t  + f++ v D+
  KHJ34678.1 12 RKLVIIGDGACGKTSLLS---VFTLGYFPTVPTVFENYVTDC 50
                6899***********954...446777777777776666665 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.019
   PduV-EutP 111 veelLksaGaekifevsavekegieellk 139
                 + +  ks Ga+k  e s+++ eg++++++
  KHJ34678.1 148 AADVSKSIGARKFLECSSLTGEGVDDVFE 176
                 45566889*****************9986 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.5e-05     0.033       1      63 [.      13      72 ..      13     164 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.5e-05
   Gtr1_RagA  1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafve 63
                k++++G +  GKts+ s+    y ++  +  +    v+  +v   +n++l lwD  Gqe++  
  KHJ34678.1 13 KLVIIGDGACGKTSLLSVFTLGYFPTVPTVFENY--VTDCRV-DGKNVQLALWDTAGQEDYER 72
                7899**************999**99866665543..444445.3579************9854 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00012      0.28       2      87 ..      14      96 ..      13     144 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00012
                EEEEESTTSSHHHHHHHHHTS...TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT....T CS
    MMR_HSR1  2 vaivGrpNvGKStLinaltge...kaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflaleeadlillvvdas....e 87
                 +i+G    GK++L++  t     ++ +  ++ +T   + g    k+ ++ l+Dt+G  e    +  ++ + la  +a++il+ +++      
  KHJ34678.1 14 LVIIGDGACGKTSLLSVFTLGyfpTVPTVFENYVTDCRVDG----KNVQLALWDTAG-QE----D-YERLRPLAYSKAHVILIGFSIDmpdsL 96
                6899**************98734444555555555555555....4579********.43....2.233333334445555544433322221 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   0.00014      0.31       3      22 ..      15      34 ..      14     100 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00014
      AAA_21  3 vliGpNgsGKSnLLdaldll 22
                v+iG+ ++GK++LL  + l 
  KHJ34678.1 15 VIIGDGACGKTSLLSVFTLG 34
                9*************999776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1439.63
//
Query:       KHJ34679.1  [L=107]
Description: hypothetical protein EV44_g2016 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00031   20.9   0.6    0.00043   20.5   0.6    1.2  1  MRP-L28   Mitochondrial ribosomal protein L28


Domain annotation for each model (and alignments):
>> MRP-L28  Mitochondrial ribosomal protein L28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.6   2.4e-08   0.00043      63     117 ..       2      56 ..       1      60 [. 0.94

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 2.4e-08
                 XXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T CS
     MRP-L28  63 rkllelskeelerrallekqwaryrqqekekdeqlirqqleaqeealeeLkkvse 117
                 ++ l+ls+    r+ ++ ++w++  +++k + + ++++++++++ a+e L++ ++
  KHJ34679.1   2 PRPLRLSRGRALRHWTIARAWSLWEKKKKMQANLELQRLYQNMQLAMEVLRNLDD 56 
                 567899999******************************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 834.61
//
Query:       KHJ34680.1  [L=529]
Description: putative galactokinase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-19   69.7   0.0    2.1e-19   68.8   0.0    1.5  1  GalKase_gal_bdg  Galactokinase galactose-binding signature
    2.3e-14   53.4   4.0    7.1e-14   51.8   3.9    2.0  2  GHMP_kinases_N   GHMP kinases N terminal domain
    4.4e-13   49.4   0.0    1.3e-12   47.9   0.0    1.8  1  GHMP_kinases_C   GHMP kinases C terminal


Domain annotation for each model (and alignments):
>> GalKase_gal_bdg  Galactokinase galactose-binding signature
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.8   0.0   3.6e-23   2.1e-19       2      48 ..      40      87 ..      39      88 .. 0.95

  Alignments for each domain:
  == domain 1  score: 68.8 bits;  conditional E-value: 3.6e-23
                     HHHHHHS---.EEEEEEEEEEEE--S-TTTT-EEEEEEEEEEEEEEEE CS
  GalKase_gal_bdg  2 eFqktFgkep.fvasAPGRvnLiGEHtDYngGfVlpmAieqdiyiavs 48
                     +F  +++++p f+ ++PGRvn+iGEH+DY+ + VlpmAie d+++avs
       KHJ34680.1 40 QFNTEYKHQPsFISRSPGRVNIIGEHIDYSLYGVLPMAIEADVILAVS 87
                     799******66***********************************97 PP

>> GHMP_kinases_N  GHMP kinases N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.8   3.9   1.2e-17   7.1e-14       1      65 [.     160     227 ..     160     228 .. 0.91
   2 ?   -3.5   0.0       2.2   1.3e+04      39      58 ..     498     518 ..     486     522 .. 0.63

  Alignments for each domain:
  == domain 1  score: 51.8 bits;  conditional E-value: 1.2e-17
                     EEEEEESSHTTSSSCHHHHHHHHHHHHHHHHTTEH.HHH...HHHHHHHHHHHHHHHHHSHHHHHHHHS CS
  GHMP_kinases_N   1 divikseiPvgaGLGSSAAlavalvaAllallgls.lee...aklaleaerlaqggngsggDvaasvyG 65 
                     di +++ +Pvg GL+SSAA++ a ++A+l+++g   +e+    +la+ +er+++ +n++g+D++asv+ 
      KHJ34680.1 160 DILMDGSVPVGGGLSSSAAFVSASALAVLYANGETsIEKatlTELAIISERAVG-VNSGGMDQSASVFS 227
                     6899****************************8665555688*********998.************85 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.2
                     HHHHHHHH.HHHHHHHHHSHH CS
  GHMP_kinases_N  39 aklaleae.rlaqggngsggD 58 
                     ++l +++  +++++ +++gg 
      KHJ34680.1 498 LELDAKQKsNAVVLSKPGGGS 518
                     556444444777778888875 PP

>> GHMP_kinases_C  GHMP kinases C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.0   2.1e-16   1.3e-12      11      83 ..     424     494 ..     418     497 .. 0.87

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 2.1e-16
  GHMP_kinases_C  11 ellgellnlsqrs.elkavvgilppeleellealselGalgaklsGaGgGptvfalfkdkdeaeqvaralreef 83 
                     + lg+l+n+sq+s  +   + +++ e+e+l+++++++Ga+g++l+GaG+G++ ++l+  +d+  +v+ a+ +++
      KHJ34680.1 424 KNLGNLMNESQDScRE--NYSCSCAEIEKLCSIARNAGAYGSRLTGAGWGGCTVHLV-PEDKLLEVQIAWDKNY 494
                     689**********944..6**************************************.8888777777775544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (529 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       873  (0.0486921); expected 358.6 (0.02)
Passed bias filter:                      644  (0.0359195); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.39
# Mc/sec: 4113.21
//
Query:       KHJ34681.1  [L=875]
Description: putative glutamate carboxypeptidase tre2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-33  116.0   0.1    2.1e-33  115.0   0.1    1.5  1  TFR_dimer      Transferrin receptor-like dimerisation domain
    1.8e-14   53.9   0.0    3.1e-14   53.1   0.0    1.4  1  Peptidase_M28  Peptidase family M28
    2.4e-10   40.3   0.0    4.7e-10   39.4   0.0    1.4  1  PA             PA domain


Domain annotation for each model (and alignments):
>> TFR_dimer  Transferrin receptor-like dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.0   0.1   3.5e-37   2.1e-33       3     120 ..     747     871 ..     746     872 .. 0.93

  Alignments for each domain:
  == domain 1  score: 115.0 bits;  conditional E-value: 3.5e-37
   TFR_dimer   3 ldpLeeaikkfkkaaeefdkwadkwed.v....ggaessllavrkrrkiNdklmrferafldpeg...lpgrpwykHvvfgpslwtgyagatFPgirda 93 
                 ++pL+ea+ +f +++++f kw+++w++ v    gg e+  +a  +r+++N+++++fe+++ld e+   +p+r++ykH++fgp++w++ ++ +FP+irda
  KHJ34681.1 747 IEPLREAVLQFASDSRRFIKWEEEWNSiVysggGGYETVVMAE-HRKSHNNRMANFETHLLDLEEgggIPNRTQYKHILFGPQKWSTDGNIFFPAIRDA 844
                 689***********************97367899*********.9*****************995566*****************7777777******* PP

   TFR_dimer  94 ieegdweeaqeqisivakaiesaaelL 120
                 ++++dw++a++q++++a++i++a++ L
  KHJ34681.1 845 VDAQDWDLAKKQVEKAADLIKKASKKL 871
                 ************************988 PP

>> Peptidase_M28  Peptidase family M28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.1   0.0   5.3e-18   3.1e-14       1     163 [.     494     660 ..     494     685 .. 0.81

  Alignments for each domain:
  == domain 1  score: 53.1 bits;  conditional E-value: 5.3e-18
                    EEEEEESTTCE.SEEEEEEEE--B-TTTTCCT---TTTTHHHHHHHHHHHHHCHH...GGCCSSEEEEEEEESSCSGSSHHHHHHHHHHC..CCTT CS
  Peptidase_M28   1 Nviatlegkat.devlllgAHyDsvgvgrgpifvGAdDnAsgvaalLelarvlaa...sgsrpkrgvrflffdaEEagllGSkafakakp..elkk 90 
                    Nv++++eg ++ ++ +++g H D + +       GA D +sg+a+++e++r++ +   +g rp r++ f+ +da E+ l+GS+ +++++    + +
     KHJ34681.1 494 NVLGKIEGVEQrEKSIIIGNHRDAWHY-------GAADPGSGTAVMMEVVRIFGDlvhRGWRPLRTIEFASWDAQEYNLIGSTEWVEDNMenLRRN 582
                    9******9999788***********98.......******************999999999*************************7433568888 PP

                    EEEEEEECS-SSSS--EEEHHHHHHCHHHHHHHHHHHHHTT-TTSCCEEEEESSTT-.....STTHHHHTTT.--EEEE CS
  Peptidase_M28  91 iaavlnlDmvgsggkellfesgdkssselekelkalakpvgraaaedpfdersgrgr.....sDhspflkag.vpvldl 163
                      a+ln+  + +g +++    ++   +++ + lk++ +p+ ++   +  +e++g+++     sD+++f++       d+
     KHJ34681.1 583 AYAYLNVGSAVTG-SNFQASGSPVFTKSVIEVLKRTSDPIRNKTLIQLWQEKGGKINglgtkSDYVAFQDMAgTSSFDM 660
                    8999999875554.45554677888888888888888888887666888888877777788899999995432665555 PP

>> PA  PA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.4   0.0   7.9e-14   4.7e-10       1      85 [.     307     395 ..     307     398 .. 0.85

  Alignments for each domain:
  == domain 1  score: 39.4 bits;  conditional E-value: 7.9e-14
          PA   1 vtgplVyscfagygisadfe.....gvdvkGkivLvqr.....tfaeKarnAqaaGAagviivndgelgaatgasgnegepdgitiPavgvsred 85 
                 vtgpl+   +a+yg+++d++     g++ +G i+L+++     + + K+++A+ aG  g++i+nd+    ++g s  +  p+g  +P  gv+r++
  KHJ34681.1 307 VTGPLI---YANYGTTDDLKllntsGINTNGAIALIRQhrdqgDIGLKVKAAELAGFSGCLIYNDPF---DDGFSLGKVVPEGRFMPEGGVQRDA 395
                 89****...***************************545566666*******************986...4444446677889999999999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (875 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 5984.22
//
Query:       KHJ34682.1  [L=229]
Description: putative csep0242 effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.18   12.0   0.1       0.32   11.2   0.1    1.4  1  UvrB_inter  UvrB interaction domain


Domain annotation for each model (and alignments):
>> UvrB_inter  UvrB interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   1.8e-05      0.32      36      83 ..      79     125 ..      70     137 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 1.8e-05
  UvrB_inter  36 rvrGdtveifpasaeevairieffgdeiesireidpltgkslekleei 83 
                 +++ dtv + p + +   + i+++g +i ++++i  +t+ s +++++i
  KHJ34682.1  79 SIETDTVTLPPLT-NYISVTITIKGSTITQLTQITVTTQASPTTITKI 125
                 6778999999999.699***********************98875544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       784  (0.043728); expected 358.6 (0.02)
Passed bias filter:                      264  (0.0147247); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1746.68
//
Query:       KHJ34683.1  [L=70]
Description: hypothetical protein EV44_g2169 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-24   84.8  22.1    6.2e-24   84.6  22.1    1.0  1  TMA7      Translation machinery associated TMA7


Domain annotation for each model (and alignments):
>> TMA7  Translation machinery associated TMA7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.6  22.1   3.4e-28   6.2e-24       2      62 .]       6      70 .]       5      70 .] 0.99

  Alignments for each domain:
  == domain 1  score: 84.6 bits;  conditional E-value: 3.4e-28
        TMA7  2 reGGKkkPLKapKkkkk.elDeeDlafkqkqkeeekalkelkakaag.kGplggg..GiKKSgKK 62
                r+GGK+kPLKapKk +k e+DeeD+af+ kqk+++ka+ e++aka++ kGpl++g  GiKKSgKK
  KHJ34683.1  6 RAGGKAKPLKAPKKAAKgEMDEEDKAFQLKQKADAKAKAEMAAKAKSgKGPLNTGsqGIKKSGKK 70
                9***************************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (70 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       840  (0.0468515); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.23s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 568.09
//
Query:       KHJ34684.1  [L=385]
Description: putative moz protein represents a chromatin-associated acetyltransferase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-41  141.5  10.1    2.8e-41  141.5  10.1    1.7  2  DUF1640   Protein of unknown function (DUF1640)
     0.0012   18.4   0.1     0.0022   17.6   0.1    1.3  1  DUF3149   Protein of unknown function (DUF3149)
  ------ inclusion threshold ------
      0.016   14.6   0.4      0.033   13.5   0.4    1.5  1  DUF5462   Family of unknown function (DUF5462)


Domain annotation for each model (and alignments):
>> DUF1640  Protein of unknown function (DUF1640)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.3      0.49   2.9e+03      39      48 ..     110     119 ..      73     133 .. 0.55
   2 !  141.5  10.1   4.6e-45   2.8e-41       1     173 [.     172     345 ..     172     347 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.49
     DUF1640  39 akslvsksel 48 
                 aks ++k+ +
  KHJ34684.1 110 AKSTINKKAQ 119
                 2222222222 PP

  == domain 2  score: 141.5 bits;  conditional E-value: 4.6e-45
     DUF1640   1 fDThalvrrLeekGftkeqAeaimsaltevlneslekvakslvskselekseylqkaalselrkevqisersefaalrseteklqreleklkqkLreei 99 
                 fDT+++v+r + +Gft eq+ + m+a++++l+ +le +++slvsks++e+++yl++aa+sel++e+q+ + +  +a+r+e++ lq+e++ l+qkL +e+
  KHJ34684.1 172 FDTYTQVQRVQGGGFTLEQSITTMKAVRALLAMNLELARSSLVSKSDVENETYLFRAACSELKTEIQSIRCKNEEAMRRERTLLQHEVDILTQKLSQEL 270
                 9************************************************************************************************** PP

     DUF1640 100 dklkadirldlnleKgrireelakleakiqelnnkidrev.salrteiEsvKldvikyliglvvgilavglavvR 173
                  +lk++i+ +++++K+ +r ++ ++e+kiqeln+ki+ ++ s+ ++e+E +++ +++++++ +++++ ++l  vR
  KHJ34684.1 271 LTLKEEIKGMFDDRKMSVRMDQRSMESKIQELNYKITVSLkSDSKSEVEVLRWVLTRRSVMGILFMAFMVLTSVR 345
                 **********************************************************************99888 PP

>> DUF3149  Protein of unknown function (DUF3149)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.1   3.7e-07    0.0022      13      39 ..     329     355 ..     328     355 .. 0.97

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 3.7e-07
     DUF3149  13 SliVIvftigmgaffiryFirKmkede 39 
                 S+++I+f+  m+++ +ry ++K++ede
  KHJ34684.1 329 SVMGILFMAFMVLTSVRYASYKSHEDE 355
                 99***********************97 PP

>> DUF5462  Family of unknown function (DUF5462)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.4   5.6e-06     0.033      19     141 ..     194     320 ..     184     322 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 5.6e-06
     DUF5462  19 esekvqyLGvvNGqvqgnsvvkvtrtlsdpvLfra..qekdellksLvirnAelrkasggevlvtvketlpdgsearvtlkveL..vvdgkkvsisvkq 113
                 + ++v +L  +N ++  +s v+ + + ++  Lfra  +e ++ ++s++ +n e+ + ++  +  +v  ++ + s+  +tlk e+  + d++k+s+ + q
  KHJ34684.1 194 TMKAVRALLAMNLELARSSLVSKSDVENETYLFRAacSELKTEIQSIRCKNEEAMRRERTLLQHEVDILTQKLSQELLTLKEEIkgMFDDRKMSVRMDQ 292
                 5567777888888888999999999999999**65226889999********99999999999999988888777777777665449************ PP

     DUF5462 114 rgedvvitvpaaakqvelrsdepvelev 141
                 r+ + +i+  + + +v l+sd+  e+ev
  KHJ34684.1 293 RSMESKIQELNYKITVSLKSDSKSEVEV 320
                 *********************9988887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (385 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1768  (0.0986112); expected 358.6 (0.02)
Passed bias filter:                      576  (0.0321267); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.28s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 2759.56
//
Query:       KHJ34685.1  [L=290]
Description: putative ubiquitin domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-34  118.5   0.0    2.8e-34  117.5   0.0    1.5  1  UBD          Ubiquitin-binding domain
    5.7e-05   22.8   0.0    0.00011   21.9   0.0    1.4  1  ubiquitin    Ubiquitin family
  ------ inclusion threshold ------
      0.016   15.0   0.0      0.028   14.2   0.0    1.4  1  Rad60-SLD    Ubiquitin-2 like Rad60 SUMO-like
        0.1   13.0   0.4       0.63   10.4   0.0    2.5  3  Ubiquitin_5  Ubiquitin-like domain


Domain annotation for each model (and alignments):
>> UBD  Ubiquitin-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.5   0.0   6.2e-38   2.8e-34       3     102 ..      64     172 ..      62     173 .. 0.94

  Alignments for each domain:
  == domain 1  score: 117.5 bits;  conditional E-value: 6.2e-38
         UBD   3 kplrkekkwtskkrpltraqlerereeFfdTrvtgrkeiWdalkaalevl..........eeddlataqaildaaeitlptgdlaegvYDelGalYelp 91 
                 k l+ +++w+s++r +t+a+l+rer +FfdTr++gr+e+W++lka+le+l          ++d l taq+ildaaei++p+++l+ gvYD+ Ga+Y +p
  KHJ34685.1  64 KSLQ-RHVWSSNSRIWTSAELDRERIDFFDTRTSGRPEVWQTLKAVLEILwagrdngdgiTDDSLGTAQQILDAAEIIVPHNNLSPGVYDSFGAYYPIP 161
                 5566.99*******************************************99998888866666*********************************** PP

         UBD  92 eyvvsdPtnli 102
                 ++++sdPtn++
  KHJ34685.1 162 RHIISDPTNVV 172
                 *********97 PP

>> ubiquitin  Ubiquitin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   2.3e-08   0.00011      12      67 ..     230     286 ..     217     288 .. 0.93

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 2.3e-08
                 EEEEETTSBHHHHHHHHHHHHTSSGGGE.EEEETTEEE-TTSBHGGHTTSTTEEEEE CS
   ubiquitin  12 tleveesdtveelKekiaekegipaeqq.rLiysGkvLedertleeygiqdgstlhl 67 
                  + ++++d+v+ +  kiae   +p+ ++ r+ y G++L++ ++l+  g +d+++++ 
  KHJ34685.1 230 QVLIARDDSVRLVARKIAEASALPPAKFiRIAYMGRILKETQSLQTQGWKDEHVVNA 286
                 567899************************************************986 PP

>> Rad60-SLD  Ubiquitin-2 like Rad60 SUMO-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   6.3e-06     0.028       5      71 ..     221     287 ..     217     288 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 6.3e-06
                 EEESSS--EEEEEETTSBHHHHHHHHHHHHT----TT-EEEETTEE--TTSBGGGSS--TTEEEEEE CS
   Rad60-SLD   5 lkgkdgkevkikVkptttvskLieayrkkkgipeeqkvrLiFDGeeLdpnstvedldiedgdtidvv 71 
                 l   d  ++++ ++++  v+ ++++ +++  +p+ + +r+ + G+ L++++ ++ ++ +d+ ++ ++
  KHJ34685.1 221 LSERDVAPIQVLIARDDSVRLVARKIAEASALPPAKFIRIAYMGRILKETQSLQTQGWKDEHVVNAL 287
                 666788899****************************************************998776 PP

>> Ubiquitin_5  Ubiquitin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.98   4.4e+03      24      51 ..      49      77 ..      30      90 .. 0.58
   2 ?   -1.4   0.0       0.7   3.1e+03      18      30 ..     172     184 ..     169     203 .. 0.73
   3 ?   10.4   0.0   0.00014      0.63      44      88 ..     239     284 ..     195     289 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.98
  Ubiquitin_5 24 krketke.ekkklletkLdvtgkelvski 51
                  r+et+e ++k++l+  L+  +    s+i
   KHJ34685.1 49 DRQETQElNSKSILHKSLQRHVWSSNSRI 77
                 33444445666777666665555555555 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.7
  Ubiquitin_5  18 llLprdkrketke 30 
                  +lLp++  k++ke
   KHJ34685.1 172 VLLPKTDDKSKKE 184
                  7899999995554 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 0.00014
  Ubiquitin_5  44 gkelvskiaeefglk.ensiKlilngklleldktLeeQgvknnskv 88 
                  ++ + +kiae   l   + i++ + g++l+  ++L++Qg k++  v
   KHJ34685.1 239 VRLVARKIAEASALPpAKFIRIAYMGRILKETQSLQTQGWKDEHVV 284
                  33456788898888624689999****************9987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       931  (0.051927); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 2262.59
//
Query:       KHJ34686.1  [L=224]
Description: putative nefa-interacting nuclear protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-27   95.0  12.1      5e-27   94.3  12.1    1.4  1  Nefa_Nip30_N   N-terminal domain of NEFA-interacting nuclear 
  ------ inclusion threshold ------
      0.013   13.7   5.0      0.017   13.3   5.0    1.2  1  EzrA           Septation ring formation regulator, EzrA
      0.015   14.8   7.4       0.02   14.4   7.4    1.3  1  Golgin_A5      Golgin subfamily A member 5
      0.042   13.7   2.7       0.15   11.9   2.7    1.8  1  Dynactin_p22   Dynactin subunit p22
       0.66    9.8   3.7        1.5    8.7   3.7    1.5  1  DUF5531        Family of unknown function (DUF5531)
       0.86    9.8   6.8        1.9    8.7   6.8    1.5  1  TPX2_importin  Cell cycle regulated microtubule associated pr
        1.3    9.5   5.3        2.8    8.4   5.3    1.5  1  Latarcin       Latarcin precursor
        1.9    8.5  11.2        1.1    9.2   8.7    1.9  2  Sec2p          GDP/GTP exchange factor Sec2p
        3.6    7.8  10.3         39    4.4   5.7    3.1  3  DUF4363        Domain of unknown function (DUF4363)


Domain annotation for each model (and alignments):
>> Nefa_Nip30_N  N-terminal domain of NEFA-interacting nuclear protein NIP30
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.3  12.1   2.5e-30     5e-27       9     105 .]       6     106 ..       1     106 [. 0.88

  Alignments for each domain:
  == domain 1  score: 94.3 bits;  conditional E-value: 2.5e-30
  Nefa_Nip30_N   9 eereerqeewekarkeleaerkk..eeaeee..edgksLyerLqenkaaKqeefeeklklknqfraLdedEveFLdeveekkreeeerrkkeeeeel 101
                   +++++ +e+w+ka+ke+e+  ++  eea+++  +  ksLye+L++nkaaKqe+fee+++l+nqfr LdedEv+FLd+v e +r++e++++ e+ ++l
    KHJ34686.1   6 KTTQKSEEAWTKAKKEIEDAAARkaEEANRKihKADKSLYEMLEANKAAKQEAFEEATRLRNQFRTLDEDEVDFLDSVLECTRAHEAKVHAETVQGL 102
                   4455559*********99887765566666677777************************************************************* PP

  Nefa_Nip30_N 102 eeFr 105
                   ++Fr
    KHJ34686.1 103 QSFR 106
                   ***8 PP

>> EzrA  Septation ring formation regulator, EzrA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   5.0   8.7e-06     0.017     252     321 ..       6      75 ..       2     107 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 8.7e-06
                 SHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSSHHHHT--HH CS
        EzrA 252 keieelekkieeilerlkeleledveeelktieeeidsLyddlekEveAkkeveknlkelkeklehlekq 321
                 k+ ++ e++  ++ +++++    ++ee++++i++  +sLy+ le+ ++Ak+e  ++  +l+++   l++ 
  KHJ34686.1   6 KTTQKSEEAWTKAKKEIEDAAARKAEEANRKIHKADKSLYEMLEANKAAKQEAFEEATRLRNQFRTLDED 75 
                 678899999************************************************9999998887765 PP

>> Golgin_A5  Golgin subfamily A member 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   7.4     1e-05      0.02      60     155 ..       5     101 ..       1     143 [. 0.81

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1e-05
   Golgin_A5  60 reelqklnqqieqlrtelqdleaqqqaeae.slreqlqeleeqleeerkakeeveaelerlkeelryleeelvrskatlqsrikdrekeieklrnql 155
                  + +qk++++  + ++e++d  a++ +ea+ ++++  ++l e le++++ak+e+ +e  rl++++r+l e+ v    ++ ++ + +e+++   + q 
  KHJ34686.1   5 AKTTQKSEEAWTKAKKEIEDAAARKAEEANrKIHKADKSLYEMLEANKAAKQEAFEEATRLRNQFRTLDEDEVDFLDSVLECTRAHEAKVHAETVQG 101
                 567889999999************999986267888899**********************************999999999999999998766663 PP

>> Dynactin_p22  Dynactin subunit p22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   2.7   7.5e-05      0.15      75     153 ..      50     129 ..      16     131 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.5e-05
  Dynactin_p22  75 lpdevKleliLaeedeLkktaalle..qlqeLkpvldseeikdvpelkekLekLsqihlkqqeeveelseevkkllekYnk 153
                    ++++K e+  +e+ +L+++ + l+  +++ L +vl+ ++  +++ ++e+++ L+    +q ee +++ +ev +ll+  n+
    KHJ34686.1  50 ANKAAKQEA-FEEATRLRNQFRTLDedEVDFLDSVLECTRAHEAKVHAETVQGLQSFRRRQAEEDQKVLSEVDTLLSVNND 129
                   666677666.5888899999999863379**********************************************997665 PP

>> DUF5531  Family of unknown function (DUF5531)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   3.7   0.00074       1.5      42      92 ..      10      60 ..       4      79 .. 0.90

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00074
     DUF5531 42 krevkstltepkqekaekrkapeaepkatknskkeverlnaclalqdkvle 92
                k e+ +t+++++ e+a  rka ea+ k+ k +k   e l+a  a ++  +e
  KHJ34686.1 10 KSEEAWTKAKKEIEDAAARKAEEANRKIHKADKSLYEMLEANKAAKQEAFE 60
                899*************************************99888777666 PP

>> TPX2_importin  Cell cycle regulated microtubule associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   6.8   0.00095       1.9      13     122 ..       7     115 ..       2     125 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00095
  TPX2_importin  13 TaqRarrvrvkssaeleeeelekiqkfKarplNrkIleapslplkkkstprlpefqeFhLkteeRaqqrsskkstesle.ss...nkvldkkktes 104
                    T+q +++   k ++e+e      ++  Ka + NrkI +a ++  ++    +  + ++F+  t  R q r+   ++  +  s     +  + k +++
     KHJ34686.1   7 TTQKSEEAWTKAKKEIED-----AAARKAEEANRKIHKADKSLYEMLEANKAAKQEAFEEATRLRNQFRTLDEDEVDFLdSVlecTRAHEAKVHAE 97 
                    444444444444444444.....5789******************************************999998744422232255555555555 PP

  TPX2_importin 105 lsevlktelrsavdseke 122
                    + + l+   r++++++++
     KHJ34686.1  98 TVQGLQSFRRRQAEEDQK 115
                    555555544555555444 PP

>> Latarcin  Latarcin precursor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   5.3    0.0014       2.8      16      75 ..      21      74 ..      10      79 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0014
    Latarcin 16 elergainrklmemvnnlRkvqgRLeemvenlrkvedledtEEARgafkklkdkfkkmge 75
                e e++a+ rk  e   ++ k  + L em+e+ +     e  EEA      l+++f+++ e
  KHJ34686.1 21 EIEDAAA-RKAEEANRKIHKADKSLYEMLEANK-AAKQEAFEEATR----LRNQFRTLDE 74
                4454445.777899999*************999.6667799***99....8888888766 PP

>> Sec2p  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   8.7   0.00056       1.1       6      74 ..       5      73 ..       1      93 [. 0.90
   2 ?   -1.3   0.0       1.1   2.2e+03       9      26 ..     107     123 ..     101     126 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00056
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHCHCCCHCTSSSS CS
       Sec2p  6 kkkreeaekekkklekEledLtasLFeeANkmVaaarkekealekkneklkeqLkeketlleslqeqLk 74
                 k +++ e++ +k +kE+ed +a+  eeAN+ + +a k+ +++ + n+  k++  e+ t l+++   L 
  KHJ34686.1  5 AKTTQKSEEAWTKAKKEIEDAAARKAEEANRKIHKADKSLYEMLEANKAAKQEAFEEATRLRNQFRTLD 73
                56778899999****************************************999999999998866665 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHHHHH CS
       Sec2p   9 reeaekekkklekEledL 26 
                 r++ae++ +k+ +E+++L
  KHJ34686.1 107 RRQAEED-QKVLSEVDTL 123
                 4555554.4555677776 PP

>> DUF4363  Domain of unknown function (DUF4363)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   5.7      0.02        39      11      56 ..       4      49 ..       2      55 .. 0.83
   2 ?    2.3   0.2     0.088   1.8e+02      65     100 ..      42      76 ..      37      80 .. 0.69
   3 ?    2.7   0.0     0.068   1.4e+02      11      41 ..     162     192 ..     156     198 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.02
     DUF4363 11 tdelsekleeleeaienedweeakekleelekeWekkkkklsifie 56
                t ++++k ee+  ++++e +++a++k+ee++ + +k  k l  ++e
  KHJ34686.1  4 TAKTTQKSEEAWTKAKKEIEDAAARKAEEANRKIHKADKSLYEMLE 49
                5678889999999999999999999999999999999998866655 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.088
     DUF4363  65 tslaklkayietedkeealaelaelkfllehikeke 100
                  sl ++ +  +   k+ea +e  +l+++++ + e e
  KHJ34686.1  42 KSLYEMLEANK-AAKQEAFEEATRLRNQFRTLDEDE 76 
                 55555555333.345899999999999999988876 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.068
     DUF4363  11 tdelsekleeleeaienedweeakekleele 41 
                 t+++s++ + ++++i +++ ++a +++ ++ 
  KHJ34686.1 162 TRKISDNSSVIDKEILANNPNNASKEITKFD 192
                 78999999******************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1950  (0.108762); expected 358.6 (0.02)
Passed bias filter:                      710  (0.0396006); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 1740.64
//
Query:       KHJ34687.1  [L=225]
Description: putative transcription factor bzip [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0017   18.4   4.6     0.0033   17.5   4.6    1.5  1  bZIP_2    Basic region leucine zipper
     0.0059   16.7   5.2     0.0059   16.7   5.2    1.7  2  bZIP_1    bZIP transcription factor
  ------ inclusion threshold ------
       0.25   11.9   3.6       0.28   11.7   2.6    1.5  1  bZIP_Maf  bZIP Maf transcription factor


Domain annotation for each model (and alignments):
>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   4.6   5.5e-07    0.0033       6      35 ..      59      88 ..      54      90 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 5.5e-07
                XXXXXXXXXXXXX-HHHHHHHHHHHHHHHH CS
      bZIP_2  6 rerRrkNreAarrsRekkkakeeeleervk 35
                ++rR +Nr+A r++R+k k+++ +le+ +k
  KHJ34687.1 59 ERRRIQNRIAQRNYRKKLKLRMWDLERLAK 88
                55555********************98765 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.6       1.5   9.2e+03       7      14 ..      26      33 ..      24      36 .. 0.80
   2 !   16.7   5.2   9.8e-07    0.0059       7      36 ..      59      88 ..      55      89 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.5
                XXXX--HH CS
      bZIP_1  7 ekrkqkNR 14
                ekr+ +N+
  KHJ34687.1 26 EKRARSNK 33
                78888887 PP

  == domain 2  score: 16.7 bits;  conditional E-value: 9.8e-07
                XXXX--HHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  7 ekrkqkNReaArrsRqRKqaeieeLerrvk 36
                e+r+++NR+a+r +R++ + ++  Ler +k
  KHJ34687.1 59 ERRRIQNRIAQRNYRKKLKLRMWDLERLAK 88
                8*************************9877 PP

>> bZIP_Maf  bZIP Maf transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.6   4.6e-05      0.28      32      79 ..      59     105 ..      45     116 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.6e-05
    bZIP_Maf  32 rRRrlKNrgyakscrkrrlqqkeelekekeeleeelerlqqelsrlrq 79 
                  RRr +Nr ++++ rk+ l+ +  + +  ++++ + +  qq++ +++q
  KHJ34687.1  59 ERRRIQNRIAQRNYRKK-LKLRMWDLERLAKTSGTPSPGQQQVGLQHQ 105
                 6999*****98888865.555566666677778888888888887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       494  (0.0275531); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1762.66
//
Query:       KHJ34688.1  [L=242]
Description: hypothetical protein EV44_g2256 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (242 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       563  (0.0314016); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 1949.82
//
Query:       KHJ34689.1  [L=234]
Description: hypothetical protein EV44_g3415 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
       0.02   14.9   1.8       0.02   14.9   1.8    2.0  2  SOAR       STIM1 Orai1-activating region
      0.035   13.5   6.6      0.035   13.5   5.3    1.7  1  DUF4618    Domain of unknown function (DUF4618)
       0.11   13.1   1.6          2    9.1   0.0    2.4  2  Anillin_N  Anillin N-terminus
        1.3    9.2   5.2         15    5.8   0.2    2.9  3  TPR_22     Tetratricopeptide repeat
        3.9    7.7  10.1       0.61   10.3   4.7    2.4  2  FliJ       Flagellar FliJ protein
          6    7.0   9.6        9.5    6.4   0.5    2.3  2  Fib_alpha  Fibrinogen alpha/beta chain family


Domain annotation for each model (and alignments):
>> SOAR  STIM1 Orai1-activating region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   1.8   6.6e-06      0.02      18      93 ..      36     114 ..      30     122 .. 0.86
   2 ?   -2.0   0.7       1.2   3.5e+03      77      89 ..     170     182 ..     124     188 .. 0.64

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 6.6e-06
        SOAR  18 ElkylnkkkqeaekqlqeAkeeveklkkkrssllgslrla...hssslddvdkkileakqaleevtkelkerqeRWqqi 93 
                 Elk  n+  ++ ++ ++eA + ++ l+k +  l+ ++++a   ++s+++++ ++i ++k++++++++ ++ +++ W ++
  KHJ34689.1  36 ELKGDNVSIKTYKQTIHEAIQIIKSLQKSNGPLVHTIQSAnkkEDSTISKILQEIRQIKATISQTQTPTQGQRQMWASV 114
                 5565666666778899************************6555778999999***********************876 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.2
        SOAR  77 eevtkelkerqeR 89 
                 ee tkel e+++ 
  KHJ34689.1 170 EERTKELMEQRKE 182
                 3334444455444 PP

>> DUF4618  Domain of unknown function (DUF4618)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   5.3   1.2e-05     0.035       1      78 [.      44     120 ..      44     143 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.2e-05
     DUF4618   1 irarkksleelkkheaeLtklnkeLvkeIqdtedstakkvrklLqqyeklktvisileksskkqleqakaeLqeweek 78 
                 i+  k++++e  +  ++L+k+n  Lv++Iq+ +++    ++k+Lq   ++k  is +++  + q  q+ a   ++ e+
  KHJ34689.1  44 IKTYKQTIHEAIQIIKSLQKSNGPLVHTIQSANKKEDSTISKILQEIRQIKATISQTQTPTQGQR-QMWASVASKRET 120
                 677899************************************************99998877763.344444444444 PP

>> Anillin_N  Anillin N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.4     0.061   1.8e+02      23      65 ..      77     117 ..      70     143 .. 0.68
   2 ?    9.1   0.0   0.00067         2       3      20 ..     171     188 ..     169     213 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.061
   Anillin_N  23 dvpesslvsplkseaeaasppkpstssetpv.gRrgrlAnLaat 65 
                 ++++s+ ++ l++ ++   +++ +++++tp+ g+r+  A  a++
  KHJ34689.1  77 KKEDSTISKILQEIRQ--IKAT-ISQTQTPTqGQRQMWASVASK 117
                 3444444444444444..6777.777777754899998888875 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00067
   Anillin_N   3 sRmqkLaeqRkrwdkdda 20 
                 +R ++L eqRk+w    a
  KHJ34689.1 171 ERTKELMEQRKEWTLKLA 188
                 8************86554 PP

>> TPR_22  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.4     0.013        38       9      43 ..      57      91 ..      49     111 .. 0.81
   2 ?    5.8   0.2    0.0049        15      17      45 ..     118     146 ..     107     153 .. 0.84
   3 ?   -0.8   0.1      0.58   1.7e+03      33      57 ..     174     202 ..     142     214 .. 0.53

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.013
      TPR_22  9 lgrhlitpqealkkLlkilskkeqeevsklvsrer 43
                + + l +++  l + ++  +kke +++sk+  + r
  KHJ34689.1 57 IIKSLQKSNGPLVHTIQSANKKEDSTISKILQEIR 91
                667888888999999**************987654 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0049
      TPR_22  17 qealkkLlkilskkeqeevsklvsrerlk 45 
                 +e+    ++i +++e++e+++l s+e +k
  KHJ34689.1 118 RETTGTTINIHDDQEKKEIARLSSKELVK 146
                 56666789*****************9776 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.58
      TPR_22  33 eevsklvsrerlklsan....dpdyqiki 57 
                 +e+ +   +  lkl a+    +p+yq+ i
  KHJ34689.1 174 KELMEQRKEWTLKLAASakmaNPSYQVLI 202
                 33444444444554432112256666655 PP

>> FliJ  Flagellar FliJ protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   4.7    0.0002      0.61      52     114 ..      81     143 ..      31     144 .. 0.86
   2 ?   -1.6   0.2      0.99   2.9e+03      21      81 ..     173     182 ..     157     195 .. 0.59

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.0002
        FliJ  52 afisaldeaiaqqkqelaqaekqvekareewqearqerkklekLkerekkeeqkeenrrEqkq 114
                 + is++ ++i q+k +++q +   + +r+ w +   +r++  + +  + ++e ke++r   k+
  KHJ34689.1  81 STISKILQEIRQIKATISQTQTPTQGQRQMWASVASKRETTGTTINIHDDQEKKEIARLSSKE 143
                 6799**************************************************999987776 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.99
        FliJ  21 leeleqyrqeyqkqlsgeaqglsaaelrnyqafisaldeaiaqqkqelaqaekqvekaree 81 
                   el                                                    ++r+e
  KHJ34689.1 173 TKEL---------------------------------------------------MEQRKE 182
                 2333...................................................333333 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.5    0.0032       9.5      75     114 ..      26      68 ..      15      74 .. 0.70
   2 ?    4.8   3.5    0.0099        29      24      94 ..      70     140 ..      64     161 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0032
                 HHHHHHHHHHHHHHC...CCHHHHHHHCCHHHHHHHHHHHHHH CS
   Fib_alpha  75 ndnvikksskeleee...ilrlketidaqesnirvLqnvlesn 114
                 ++  +k++++el+ +   i ++k+ti + ++ i+ Lq+    +
  KHJ34689.1  26 TNAPVKRFKEELKGDnvsIKTYKQTIHEAIQIIKSLQKSNGPL 68 
                 45566777777764322288999**************976555 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0099
                 HCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH CS
   Fib_alpha  24 dlllkyekdvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlk 94 
                  ++++ +k+ + +++k+ +e+++i+ + +++++ ++  ++++++  ++ + + ++i+   ++ ++ei+rl 
  KHJ34689.1  70 HTIQSANKKEDSTISKILQEIRQIKATISQTQTPTQGQRQMWASVASKRETTGTTINIHDDQEKKEIARLS 140
                 57888899999999999999999999999999999999999998888888777777766666666676664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (234 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1936  (0.107981); expected 358.6 (0.02)
Passed bias filter:                      621  (0.0346366); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 1697.81
//
Query:       KHJ34690.1  [L=1046]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00034   20.8   0.1     0.0008   19.6   0.1    1.7  1  Retrotrans_gag   Retrotransposon gag protein
  ------ inclusion threshold ------
      0.014   15.2   5.2      0.014   15.2   5.2    3.2  3  zf-CCHC_2        Zinc knuckle
      0.044   13.5   0.0      0.099   12.3   0.0    1.7  1  DUF4219          Domain of unknown function (DUF4219)
      0.065   12.9   0.0        0.4   10.3   0.0    2.2  2  Retrotran_gag_2  gag-polypeptide of LTR copia-type
       0.08   13.3   8.5        3.7    7.9   0.3    3.5  3  eIF3g            Eukaryotic translation initiation factor 3 s
       0.13   12.2   0.0        0.3   11.0   0.0    1.6  1  DUF2824          Protein of unknown function (DUF2824)


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.1   2.7e-07    0.0008       4      95 ..     742     832 ..     739     833 .. 0.92

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 2.7e-07
  Retrotrans_gag   4 stslegaAkswlkslvarsidasesWkdlkkaflktflpserkdqleeelsslrQ.gtesvreYvtrfktladqlde.vlteeakiekflaGLn 95 
                     +++l+++ ++w+++  ++ ++   +++ + ++f+++f ++   +++ ++l ++rQ +++ ++++++ f+ +++q++  +++   k++++ a Ln
      KHJ34690.1 742 PLTLRNRVSQWFSTGGPDGDW---NYELFISHFNDNFGNKTAARTSGDKLTRIRQgEHQLFADFLNDFEYMLAQAKGlKWEGRIKVNQLSASLN 832
                     678999***************...9******************************888999***************999999999888877776 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   1.6      0.45   1.4e+03       6      10 ..     381     385 ..     380     387 .. 0.89
   2 ?   -1.2   0.6      0.64   1.9e+03       5      11 ..     417     423 ..     417     424 .. 0.83
   3 ?   15.2   5.2   4.6e-06     0.014       5      20 ..     971     986 ..     971     987 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.45
   zf-CCHC_2   6 ChiCg 10 
                 C+iC+
  KHJ34690.1 381 CKICN 385
                 ****9 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.64
   zf-CCHC_2   5 vChiCgk 11 
                 +C+ Cg 
  KHJ34690.1 417 KCRNCGG 423
                 7****96 PP

  == domain 3  score: 15.2 bits;  conditional E-value: 4.6e-06
   zf-CCHC_2   5 vChiCgkkGHyIqdCP 20 
                 +C +C  kGH++++CP
  KHJ34690.1 971 KCTRCAGKGHWFKNCP 986
                 7*************** PP

>> DUF4219  Domain of unknown function (DUF4219)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   3.3e-05     0.099       1      26 [.      28      54 ..      28      55 .. 0.96

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 3.3e-05
     DUF4219  1 Ldg.tNYatWklrMklyLiaqdLWevV 26
                L+g +NYa W++ M ++ ++++L evV
  KHJ34690.1 28 LTGiENYAIWSATMIAVFRTLKLLEVV 54
                8999**********************9 PP

>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00013       0.4       3      46 ..      74     117 ..      72     123 .. 0.92
   2 ?   -0.9   0.0      0.38   1.1e+03      54     114 ..     786     844 ..     731     864 .. 0.74

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00013
  Retrotran_gag_2   3 kkdakalalIvlsisdsllelvkeektakevWdkLkelyekksa 46 
                      + ++ al++ ++ i  + l+ v e +t  ++W +Lk ly +++a
       KHJ34690.1  74 SLNDCALGIFIQVIHGDILKGVVEMETINDIWLHLKCLYHRDTA 117
                      56899**********************************99985 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.38
  Retrotran_gag_2  54 kklfslkmkegesvadhinkleelvneLsalgvkiddedkvvllLasLPesyetfvtaies 114
                       kl++++  e++  ad++n++e +  + +  g k++   kv +l asL ++ ++   a+ +
       KHJ34690.1 786 DKLTRIRQGEHQLFADFLNDFEYMLAQAK--GLKWEGRIKVNQLSASLNKRLSDYLVAVNT 844
                      67888888888888888888888887755..456666666666666666666665555555 PP

>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.3    0.0013       3.7      93     119 ..     368     393 ..     345     397 .. 0.79
   2 ?    2.8   0.3      0.05   1.5e+02     104     114 ..     415     425 ..     403     434 .. 0.80
   3 ?    5.9   0.2    0.0055        17      96     121 ..     965     987 ..     928     989 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0013
       eIF3g  93 ekaklkkkekklvkCriCkgdHfTskC 119
                  ++k k k++ l  C+iC+g+H T +C
  KHJ34690.1 368 VARKFK-KQQPLDFCKICNGHHPTKNC 393
                 555666.4566789************* PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.05
       eIF3g 104 lvkCriCkgdH 114
                 + kCr+C+g H
  KHJ34690.1 415 VTKCRNCGGPH 425
                 579*******9 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0055
       eIF3g  96 klkkkekklvkCriCk.gdHfTskCPy 121
                 +l+     + kC  C    H+  +CP+
  KHJ34690.1 965 ALR----AAGKCTRCAgKGHWFKNCPH 987
                 333....2369****7478*******6 PP

>> DUF2824  Protein of unknown function (DUF2824)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0    0.0001       0.3      17      88 ..      59     133 ..      42     149 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0001
     DUF2824  17 kakvgaavengdeYqlkpda...vYlgvyeglilvGvvevreienkvvevhavydpgfrGkyaleatkafskwll 88 
                 k+  g   e+ d Y+  +d+   ++++v  g il Gvve++ i++  +    +y  +     a +++k   k l 
  KHJ34690.1  59 KPSAGMSKEEVDAYNSLNDCalgIFIQVIHGDILKGVVEMETINDIWLHLKCLYHRDTAFALAHQVGKGNDKSLA 133
                 78889999**********9966679*****************************999877677776666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1046 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.72u 0.28s 00:00:01.00 Elapsed: 00:00:00.42
# Mc/sec: 7443.85
//
Query:       KHJ34691.1  [L=210]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       517  (0.028836); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1604.70
//
Query:       KHJ34692.1  [L=458]
Description: putative elongation factor 1-alpha [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.6e-54  183.7   0.0      4e-54  183.1   0.0    1.2  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    8.9e-42  141.9   0.0    1.8e-41  140.9   0.0    1.6  1  GTP_EFTU_D3  Elongation factor Tu C-terminal domain
    3.5e-14   53.0   2.1    3.5e-14   53.0   2.1    2.0  2  GTP_EFTU_D2  Elongation factor Tu domain 2
    0.00065   19.8   0.1      0.017   15.2   0.1    2.5  1  MMR_HSR1     50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.1   0.0   8.9e-58     4e-54       3     190 ..       7     232 ..       5     236 .. 0.93

  Alignments for each domain:
  == domain 1  score: 183.1 bits;  conditional E-value: 8.9e-58
                 EEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHH.HHHST............HCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHHHH CS
    GTP_EFTU   3 irnigiighvDhGKtTLtdrLlyktgaiskkgeka.eeerv............lDtlkeErergiTiksaaisleketkkylinliDtPGHvdFskevi 88 
                 ++n+++ighvD+GK+T+t++L+yk+g i+k++ ++ e+e++            lD+lk+ErergiTi++a +++e  t ky +++iD+PGH+dF+k++i
  KHJ34692.1   7 HINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKfEKEAAelgkgsfkyawvLDKLKAERERGITIDIALWKFE--TPKYYVTVIDAPGHRDFIKNMI 103
                 99********************************964344478999*****************************..********************** PP

                 HHHHT-SEEEEEEETTTB.......STHHHHHHHHHHHHTTTE.EEEEEESCGST...HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEBTT CS
    GTP_EFTU  89 rglrvlDgavlvvdaveG.......vepqteevlrlalkegvp.iivfiNKmDrl...kaelkeiveevkqklsrkeeklekygekgekevpvvfgSal 176
                 +g++++D+a+l+++a +G          qt+e++ la ++gv+ +iv+iNKmD +   ++++kei++e   ++      ++k+g++ +  v +v++S++
  KHJ34692.1 104 TGTSQADCAILIIAAGNGefeagisKDGQTREHALLAFTLGVKqLIVAINKMDTAkwaEDRFKEIIKETT-NF------IKKVGYNPK-SVAFVPISGF 194
                 ************************99*****************************99999******9999.88......8******96.********** PP

                 TTBTHH........................HHHHHHHH CS
    GTP_EFTU 177 kgegvk........................tllealve 190
                 +g+++                         tllea+++
  KHJ34692.1 195 NGDNMIepssncpwykgwsketkagsstgkTLLEAIDS 232
                 ***99888888888888888888888888888888876 PP

>> GTP_EFTU_D3  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.9   0.0   4.1e-45   1.8e-41       2     111 ..     332     439 ..     331     440 .. 0.98

  Alignments for each domain:
  == domain 1  score: 140.9 bits;  conditional E-value: 4.1e-45
                  -EEECCEEEEEEESSS..SS-BSTT-EEEEESSS-EEEEEEEEEEECCSSTTSB-BSS-SSCCSTT-CEEEEEEECCEEEE--TTTHCCCCEEEEECT CS
  GTP_EFTU_D3   2 ikphtkfeAqvyilekerhtpitagYrpvlyirtadvtgkvveLlskldkktekvsekkpefvkpGdnvivevelikpialekgseypqlGrFaiReg 99 
                   k +++f+Aqv++l++  +++i agY+pvl+++ta++++k++eLl+k+d++t+k+ e +p+fvk+Gd++iv++ ++kp+++e++s yp+lGrFa+R++
   KHJ34692.1 332 PKGAEHFTAQVIVLNH--PGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKSIEATPKFVKSGDAAIVKMIPSKPMCVESFSSYPPLGRFAVRDM 427
                  57889***********..******************************************************************************** PP

                  TCEEEEEEEEEE CS
  GTP_EFTU_D3 100 grTvaaGvvtei 111
                  ++Tva+Gv++++
   KHJ34692.1 428 RQTVAVGVIKSV 439
                  **********98 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       2.8   1.3e+04      19      35 ..      10      24 ..       9      31 .. 0.72
   2 !   53.0   2.1   7.8e-18   3.5e-14       1      72 [.     258     323 ..     258     325 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 2.8
                 EEEEC.TCTTSEEEEEEE CS
  GTP_EFTU_D2 19 vrilg.ndtskkeivtri 35
                 v+++g +d++k+   t+ 
   KHJ34692.1 10 VVVIGhVDSGKS---TTT 24
                 677787888888...665 PP

  == domain 2  score: 53.0 bits;  conditional E-value: 7.8e-18
                  EEEEEEEEEESEEETTEEEEEEC.TCTTSEEEEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCE CS
  GTP_EFTU_D2   1 GtvalgrvysGtlkkGdevrilg.ndtskkeivtrissletfhededeavaganaGvivaikgledaiivGdt 72 
                  Gtv  gr+++G++k G+ v + +      +   t+++s+e++he+++e v+g+n+G++v+ + +++ i++G++
   KHJ34692.1 258 GTVPVGRIETGIIKAGMIVTFAPaG---VT---TEVKSVEMHHEQLTEGVPGDNVGFNVKNVSVKE-IRRGNV 323
                  99*******************7744...45...*********************************.****98 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   3.9e-06     0.017       2      87 ..      10     124 ..       9     156 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 3.9e-06
                 EEEEESTTSSHHHHHHHHH...............T................STEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinalt...............g................ekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgka 69 
                 v+++G+  +GKSt    l+               +                +k +++++ g T+di   ++++ +  ++++D pG  +    +  +++ 
  KHJ34692.1  10 VVVIGHVDSGKSTTTGHLIykcggidkrtiekfeKeaaelgkgsfkyawvlDKLKAERERGITIDIALWKFETPKYYVTVIDAPG--H----RDFIKNM 102
                 899999999999999999966666665555555505555555666666655689999999******99999988889********..3....2235555 PP

                 HHHHHCTSEEEEEEETT....T CS
    MMR_HSR1  70 flaleeadlillvvdas....e 87 
                 +    +ad ++l++ a     e
  KHJ34692.1 103 ITGTSQADCAILIIAAGngefE 124
                 5556668888888876643331 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       499  (0.027832); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.27s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3241.57
//
Query:       KHJ34693.1  [L=304]
Description: putative mage family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-57  194.1   0.9    5.2e-57  193.0   0.9    1.6  1  MAGE             MAGE family
  ------ inclusion threshold ------
      0.024   14.6   5.6      0.052   13.4   5.6    1.6  1  Sigma70_ner      Sigma-70, non-essential region
       0.15   12.5   6.6       0.37   11.2   6.6    1.6  1  CENP-B_dimeris   Centromere protein B dimerisation domain
       0.43    9.7   8.0        5.8    6.0   6.6    2.1  2  DUF688           Protein of unknown function (DUF688)
        1.1    9.9   5.9        2.1    9.0   0.0    2.6  2  Ctr              Ctr copper transporter family
        2.8    5.9  11.0        5.9    4.9  11.0    1.5  1  DNA_pol_phi      DNA polymerase phi
        3.5    5.6   6.5        5.6    4.9   6.5    1.2  1  Sporozoite_P67   Sporozoite P67 surface antigen
        5.2    7.3  11.5        6.9    7.0   9.6    2.0  2  DUF4611          Domain of unknown function (DUF4611)
          7    7.3  12.2        1.6    9.4   7.5    2.1  2  Adaptin_binding  Alpha and gamma adaptin binding protein p34
        7.4    5.8  12.3         13    5.0  12.3    1.4  1  NOA36            NOA36 protein


Domain annotation for each model (and alignments):
>> MAGE  MAGE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  193.0   0.9   2.9e-60   5.2e-57       1     212 [.      73     265 ..      73     266 .. 0.93

  Alignments for each domain:
  == domain 1  score: 193.0 bits;  conditional E-value: 2.9e-60
        MAGE   1 LVRlalacesqrtpIrRedikkkvlgkqgkrafkkvfeeaqkqLrdvFGmeLvelpskeekkstessqekraaekakskkstrsksyiLvstlpeeyre 99 
                 ++R++lac++qr +I+R+ i++kv+gkq + +fkkvf+eaq+ Lrd FG+e+velp+++  k   + +ek+aa+k+ + +st+s syiL +tlp eyr 
  KHJ34693.1  73 VIRYVLACDYQRLTIKRSGITEKVIGKQ-RGNFKKVFKEAQQLLRDRFGLEMVELPARQ--K--VTLREKKAAKKS-KGNSTSSTSYILKTTLPYEYR- 164
                 69*************************6.5****************************8..6..889999876666.5********************. PP

        MAGE 100 aaaiiapskiesealeekeaaykGiltvvlslills.ggsiseqeLekyLkrlgldenstskeitklklkldelLkklvkqgYlvrekeskasdeeeek 197
                 +++ii+ s   s     +e ay+G++t++++li ls ++++++++L +yLkrl+ld+n t        +++ elL+++ k++Yl+ +k+   +d+++e+
  KHJ34693.1 165 KPEIIPLSTDWS---TSDEYAYIGLYTTIICLISLSaDKQMANHQLDRYLKRLNLDRN-TG------LGTTSELLARMKKENYLQETKT---NDKDGET 250
                 888888876666...89999****************999*******************.43......47********************...89***** PP

        MAGE 198 veyrvGpRakvEige 212
                  e+rvGpR+ vE+++
  KHJ34693.1 251 SEWRVGPRGFVEVDR 265
                 ************986 PP

>> Sigma70_ner  Sigma-70, non-essential region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   5.6   2.9e-05     0.052      29     112 ..      31     119 ..      18     137 .. 0.64

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.9e-05
  Sigma70_ner  29 flDeeeeeeeeeeeedeeeeeeeedddeeeseseaadeeelkeealekfeelreqyeklrk......alkkk.grkskkyekareelseef 112
                  f+D +++  +  e++++eeee+++ddd+++++++++d+ +  +++++ + ++  q  ++++      +++k+ g  +k  ++a++ l + f
   KHJ34693.1  31 FNDRSAQSPD--ESSRDEEEEDDDDDDNNNEANSSEDLDQTVKKVIRYVLACDYQRLTIKRsgitekVIGKQrGNFKKVFKEAQQLLRDRF 119
                  5552222222..2223333333344445677777777777777777777777777777777888888888885666666777776666554 PP

>> CENP-B_dimeris  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   6.6   0.00021      0.37      12      40 ..      40      68 ..      30      89 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00021
  CENP-B_dimeris 12 sesesdeeeeeeeedeededeeddeddde 40
                     es  deeee++++d+++++ +  ed d+
      KHJ34693.1 40 DESSRDEEEEDDDDDDNNNEANSSEDLDQ 68
                    46777888888888888887777787665 PP

>> DUF688  Protein of unknown function (DUF688)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   6.6    0.0032       5.8     199     240 ..      17      61 ..       2      71 .. 0.74
   2 ?    3.4   0.0      0.02        35     155     194 ..     109     154 ..      89     249 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0032
      DUF688 199 vvpgekrqellryrvslapnyllnqdiddeeeedenddDe...vv 240
                  v ++ +++ l+ r++  + ++  +  +deeeed++ddD+     
  KHJ34693.1  17 GVAKQAQEQELASRFNDRSAQSPDESSRDEEEEDDDDDDNnneAN 61 
                 4567777788888888889898888899********999944333 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.02
      DUF688 155 aesrdlmmsRF......LPAAkAlalespkyasrkkpasaesepvr 194
                 +e ++l+ +RF      LPA + ++l ++k a + k+ s+ s + +
  KHJ34693.1 109 KEAQQLLRDRFglemveLPARQKVTLREKKAAKKSKGNSTSSTSYI 154
                 6788888899888888899999999999999999998766665544 PP

>> Ctr  Ctr copper transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   5.5       1.7   3.1e+03      51      84 ..      26      78 ..       6     162 .. 0.52
   2 ?    9.0   0.0    0.0012       2.1      12      78 ..     171     246 ..     164     293 .. 0.67

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.7
         Ctr 51 ewdrhla.rsrekrkaassplvdssssseeeaea........................k 84
                e+ ++ + rs++++ ++s+ +++++++      +                         
  KHJ34693.1 26 ELASRFNdRSAQSPDESSRDEEEEDDD------DddnnneanssedldqtvkkviryvL 78
                222222112222222222221111111......11111223333334444444444440 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0012
         Ctr  12 lfrsWritskgqlagsciglfllaifyeflralrerlerewdrhl.a........rsrekrkaassplvdssssse 78 
                 l+  W +++  +++g    +++l  +  + ++ +++l+r ++r +          ++  +r+++++ l++++++++
  KHJ34693.1 171 LSTDWSTSDEYAYIGLYTTIICLISLSADKQMANHQLDRYLKRLNlDrntglgttSELLARMKKENYLQETKTNDK 246
                 8899*********************************987777665134455543222233333333333222222 PP

>> DNA_pol_phi  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9  11.0    0.0033       5.9     642     696 ..      23      73 ..       7      81 .. 0.40

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0033
  DNA_pol_phi 642 dedeeddeeeeeeddeededseedddeeesdedeededdedvdeidelreklaea 696
                  +e+e  +  ++ ++++ de+s    deee+d+d++d+++e+    ++l++ ++++
   KHJ34693.1  23 QEQELASRFNDRSAQSPDESSR---DEEEEDDDDDDNNNEANSS-EDLDQTVKKV 73 
                  2222222222222222222222...2222222222222222222.2566666655 PP

>> Sporozoite_P67  Sporozoite P67 surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   6.5    0.0031       5.6      93     138 ..      23      68 ..       3      82 .. 0.69

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0031
  Sporozoite_P67  93 vsqeselqsdteineddkGskedseedddeeeeednkstsskdgkg 138
                      +qe+  + + +  ++ + s+ d+ee+dd++++++n++ ss d  +
      KHJ34693.1  23 QEQELASRFNDRSAQSPDESSRDEEEEDDDDDDNNNEANSSEDLDQ 68 
                     2344455556666777778888888888889999999999988554 PP

>> DUF4611  Domain of unknown function (DUF4611)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   9.6    0.0039       6.9      51      87 ..      24      63 ..       9      72 .. 0.71
   2 ?   -1.4   0.0       1.5   2.7e+03       6      17 ..     244     255 ..     228     267 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0039
     DUF4611 51 eqe....aqddvaaagdeeeegededdeeeekniknktksd 87
                eqe     +d+ a+++de++ +e+e+d++++ n +n ++s+
  KHJ34693.1 24 EQElasrFNDRSAQSPDESSRDEEEEDDDDDDN-NNEANSS 63
                455555567888999999988888888777776.4444444 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.5
     DUF4611   6 vgrdGqkqrlrv 17 
                  ++dG++ ++rv
  KHJ34693.1 244 NDKDGETSEWRV 255
                 467888888887 PP

>> Adaptin_binding  Alpha and gamma adaptin binding protein p34
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   7.5   0.00088       1.6      39      96 ..      18      73 ..       1      76 [. 0.73
   2 ?    0.2   0.1      0.62   1.1e+03      80      80 ..     198     198 ..      95     291 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00088
  Adaptin_binding 39 eadeaqlekeeeeqdpsqpastepdksaaesesadaeflfggdeaarledlesllskl 96
                      a++aq+++   + ++   +  +pd+s+ ++e++d++++++++ea+  edl+++++k+
       KHJ34693.1 18 VAKQAQEQELASRFNDRSAQ--SPDESSRDEEEEDDDDDDNNNEANSSEDLDQTVKKV 73
                     45666666666666666665..47888899999999999**************99986 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.62
  Adaptin_binding  80 g 80 
                       
       KHJ34693.1 198 A 198
                      1 PP

>> NOA36  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0  12.3    0.0072        13     245     302 ..      20      65 ..       1      72 [. 0.33

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.0072
       NOA36 245 ddddddeedsdydaylkalasgddeddegdedddddddeedddeeeddedeeeeeeee 302
                 ++++++e +s +++  ++            + d+   dee++d+++dd+++e++++e+
  KHJ34693.1  20 KQAQEQELASRFNDRSAQ------------SPDESSRDEEEEDDDDDDNNNEANSSED 65 
                 222223333333332222............2222222222222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1581  (0.0881812); expected 358.6 (0.02)
Passed bias filter:                      730  (0.0407162); expected 358.6 (0.02)
Passed Vit filter:                       111  (0.00619109); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.44
# Mc/sec: 2083.37
//
Query:       KHJ34694.1  [L=614]
Description: putative atp-dependent rna helicase dbp3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-51  175.1   0.0      5e-51  172.9   0.0    2.0  2  DEAD            DEAD/DEAH box helicase
    7.4e-34  116.4   0.2    5.6e-29  100.7   0.0    3.2  3  Helicase_C      Helicase conserved C-terminal domain
    2.1e-07   31.1   0.0    2.1e-07   31.1   0.0    2.6  2  ResIII          Type III restriction enzyme, res subunit
    0.00091   18.1   0.2       0.29    9.9   0.0    3.0  3  UTP25           Utp25, U3 small nucleolar RNA-associated SSU 
     0.0057   15.9   0.0     0.0057   15.9   0.0    2.0  2  ERCC3_RAD25_C   ERCC3/RAD25/XPB C-terminal helicase
       0.01   15.2   0.0       0.01   15.2   0.0    3.1  3  CMS1            U3-containing 90S pre-ribosomal complex subun
  ------ inclusion threshold ------
      0.084   12.8   0.0        0.5   10.3   0.0    2.2  2  LpxI_N          LpxI N-terminal domain
       0.13   12.6   0.7        1.7    8.9   0.7    2.6  1  AAA_22          AAA domain


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.9   0.0   2.2e-54     5e-51       1     175 [.     219     391 ..     219     392 .. 0.95
   2 ?   -1.0   0.0      0.59   1.3e+03      60     105 ..     458     507 ..     437     539 .. 0.77

  Alignments for each domain:
  == domain 1  score: 172.9 bits;  conditional E-value: 2.2e-54
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHS....TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyet....kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskld 95 
                 t+iQa+++p +  g+d+++ aeTGsGKT+af+ip++ +++++       +g +aliv+PtreLa q ++++ +++k+ ++++++i+ggv++++q+++  
  KHJ34694.1 219 TPIQAATWPYLFAGRDLIGVAETGSGKTMAFAIPCVTRITSSiqskSYVKGVRALIVSPTRELAMQSYDQIHQLCKTSGVKAVCIYGGVPKDEQRKNS- 316
                 89*************************************998999778999****************************************9999999. PP

                 TTCSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  96 ngvdivvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvkk 175
                 +++di+v+tpgrl dl+++g +nls+v++lVlDEadr+ld+gf+++i++i+n++p+       +rq+++++AT+p++v+ 
  KHJ34694.1 317 KKADIIVATPGRLNDLINEGCINLSKVEYLVLDEADRMLDKGFEEEIKKIINTTPEL-----GTRQTLMFTATWPESVQS 391
                 ******************************************************744.....4467*********99876 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.59
                 HHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHH...TT.CSEEEEEH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xx.xxxxxxxx RF
        DEAD  60 aeqtlnnlkkfkkyidlrvlliiggvaardqlskld...ng.vdivvgtp 105
                  ++ +++++ f+   + rv  i g+ ++++  + ld   +g + i+v+t 
  KHJ34694.1 458 YKKEATRVEGFIRSKGFRVAGIHGDLSQEQRTRSLDafkKGnTPILVATD 507
                 55556677777777778999888866666666666433255799999985 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   8.3e-05      0.19      11      73 ..     264     325 ..     253     356 .. 0.74
   2 ?   -2.3   0.0       2.5   5.6e+03      12      40 ..     371     398 ..     361     419 .. 0.58
   3 !  100.7   0.0   2.5e-32   5.6e-29       8     111 .]     437     544 ..     430     544 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 8.3e-05
                 HHTTTTSEEEEEESSHH...HHHH...HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEES CS
  Helicase_C  11 kleeeggkilifvntid...rlek...vklllekkgikvavlhgelpqnereeileqfnkgesdvLiat 73 
                 k+ ++g ++li+++t++   +  +   ++ l++++g+k+++++g  p++e+++  ++      d+++at
  KHJ34694.1 264 KSYVKGVRALIVSPTRElamQ--SydqIHQLCKTSGVKAVCIYGGVPKDEQRKNSKKA-----DIIVAT 325
                 67789999*********7541..244678888999***************99866555.....677776 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 2.5
                 HTTTTSEEEEEESSHH.HHHHHHHHHHHT.T CS
  Helicase_C  12 leeeggkilifvntid.rlekvklllekk.g 40 
                  e  ++++l+f+ t+  ++   + l +++ +
  KHJ34694.1 371 PELGTRQTLMFTATWPeSV---QSLASTFmK 398
                 5667789999999988433...344333333 PP

  == domain 3  score: 100.7 bits;  conditional E-value: 2.5e-32
                 HHH....HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHH CS
  Helicase_C   8 ell....kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiq 102
                 ++l    + ++++++i++f+ +++++ +v+ + ++kg++va +hg+l+q++r ++l++f+kg++ +L+atdva+rG+dip+v+lV n+ +p +v++y++
  KHJ34694.1 437 QILkeyqSGSKSNDRIIVFALYKKEATRVEGFIRSKGFRVAGIHGDLSQEQRTRSLDAFKKGNTPILVATDVAARGLDIPSVKLVLNLTFPLTVEDYVH 535
                 3333335778999***********887777777889*************************************************************** PP

                 HHTTSSSTT CS
  Helicase_C 103 riGRtgRag 111
                 riGRtgRag
  KHJ34694.1 536 RIGRTGRAG 544
                 *******97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -6.3   6.9         8   1.8e+04      98     122 ..      71     102 ..      21     174 .. 0.59
   2 !   31.1   0.0   9.4e-11   2.1e-07      30     169 ..     238     385 ..     231     387 .. 0.80

  Alignments for each domain:
  == domain 1  score: -6.3 bits;  conditional E-value: 8
                 ......-SEEEEEHHHHHHTH........... CS
      ResIII  98 ekdstnkkilvttiqsldadseee.......e 122
                 ek++ +++i+ t+i ++ ++s ++       e
  KHJ34694.1  71 EKKDASNSIIDTSITAAESNSVSDtkdlgdkE 102
                 33333444444444444444322233333320 PP

  == domain 2  score: 31.1 bits;  conditional E-value: 9.4e-11
                 EESTTSTHHHHH.HHHHHHH-S...........-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHHTH... CS
      ResIII  30 kmaTGtGKTlva.aklierllkkgkee......kflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqsldadseee 121
                 +++TG+GKT+   +  + r++++ + +      ++l++ p+++l  q ++++ ++ ++   ++  ++ g  k++++k+s++++i+v+t  +l+  +   
  KHJ34694.1 238 VAETGSGKTMAFaIPCVTRITSSIQSKsyvkgvRALIVSPTRELAMQSYDQIHQLCKTSGVKAVCIYGGVPKDEQRKNSKKADIIVATPGRLNDLI--- 333
                 578*******986778888888877778889*********************99999887776666666666666889******************... PP

                 .....HHHTTT-SEEEEETGGGTTS.TTTHH.HHHT---......SEEEEEESS- CS
      ResIII 122 eeeseellrdrfdviiiDEaHrlgakkswre.ilekfke......avllglTATp 169
                   ++     ++ ++++ DEa r+ + k ++e i++ ++          l +TAT 
  KHJ34694.1 334 --NEGCINLSKVEYLVLDEADRMLD-KGFEEeIKKIINTtpelgtRQTLMFTATW 385
                 ..55666667777************.544443544444444588899999***96 PP

>> UTP25  Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.081   1.8e+02      77     102 ..     271     296 ..     259     302 .. 0.82
   2 ?    3.4   0.0     0.012        26     161     209 ..     318     360 ..     314     378 .. 0.78
   3 !    9.9   0.0   0.00013      0.29     313     388 ..     432     507 ..     374     527 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.081
       UTP25  77 kvLillptreaalevvelllklleae 102
                 + Li+ ptre a++  +++ +l++++
  KHJ34694.1 271 RALIVSPTRELAMQSYDQIHQLCKTS 296
                 6899********99999999998876 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.012
       UTP25 161 ssdiiiaSPlglrliieeedkkkrdtdfLsSiEvlivdqadvlemQnwe 209
                 ++dii+a P  l+ +i+e          Ls +E l++d+ad +    +e
  KHJ34694.1 318 KADIIVATPGRLNDLINE------GCINLSKVEYLVLDEADRMLDKGFE 360
                 79************9993......45679************99876654 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00013
       UTP25 313 kfftekilpqlkkssskssgiliyipsyfdfvrvrnylkeekvsfaaiseysskkevsraRelFfkgkkkvlLyte 388
                 ++ + +il++++++s+++++i+++     + +rv+ +++++ +  a i+   s+++ +r  ++F+kg++ +l+ t+
  KHJ34694.1 432 EYRLLQILKEYQSGSKSNDRIIVFALYKKEATRVEGFIRSKGFRVAGIHGDLSQEQRTRSLDAFKKGNTPILVATD 507
                 455679*******9999999999999999********************************************996 PP

>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   2.3       1.8     4e+03     214     242 ..      47      75 ..      24     117 .. 0.63
   2 !   15.9   0.0   2.5e-06    0.0057      38     151 ..     423     543 ..     412     559 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 1.8
  ERCC3_RAD25_C 214 eqkellqkvlaakdeeaeeeelekelkek 242
                     +k+l++ +++a++e+++ e++++e+k++
     KHJ34694.1  47 IEKKLVRAAKKARKEKRRLEKASREKKDA 75 
                    34555555555555544444444443333 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 2.5e-06
  ERCC3_RAD25_C  38 lyvmnp..nkfracefLikyhe..krgDkiivfs...DnvfaLkey..akklkkpyiyGetseaerlkilqkfkknpkvntiflskvgDtsiDlPe 124
                    + v+ p  + +r ++ L +y+   k +D+iivf+    +   ++ +  +k ++ + i+G+ s+++r++ l++fkk  ++  ++   v+   +D+P+
     KHJ34694.1 423 VEVVEPrnKEYRLLQILKEYQSgsKSNDRIIVFAlykKEATRVEGFirSKGFRVAGIHGDLSQEQRTRSLDAFKKG-NTPILVATDVAARGLDIPS 517
                    445555214578888888887654789*****983222333344332256678888******************98.56788889*********** PP

  ERCC3_RAD25_C 125 anvliqisshfgsrrqeaqrlGriLra 151
                     + ++ + +  +       r+Gr  ra
     KHJ34694.1 518 VKLVLNLTFPLTV-EDYVHRIGRTGRA 543
                    **99998877655.3456677777666 PP

>> CMS1  U3-containing 90S pre-ribosomal complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -9.9  15.5         8   1.8e+04      14      64 ..      53     104 ..      25     112 .. 0.65
   2 ?   -0.7   3.8      0.33   7.4e+02       8      41 ..      91     126 ..      78     154 .. 0.58
   3 !   15.2   0.0   4.4e-06      0.01     176     210 ..     317     351 ..     311     372 .. 0.88

  Alignments for each domain:
  == domain 1  score: -9.9 bits;  conditional E-value: 8
        CMS1  14 ekgkkkksekkRskkkerkkgkl.ketqDvkaglteavalqdpelLadylaq 64 
                  ++kk ++ek+R  k+ r+k++  +++ D+     e+  + d + L d  ++
  KHJ34694.1  53 RAAKKARKEKRRLEKASREKKDAsNSIIDTSITAAESNSVSDTKDLGDKETR 104
                 4566666666776666555555504555877667777777888888776554 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.33
        CMS1   8 rkaenkekgkkkksek..kRskkkerkkgklketqD 41 
                 + ++ k+ g k+ ++k  k +k+++r    + +t++
  KHJ34694.1  91 SVSDTKDLGDKETRRKkkKVEKHRKRSSHPIESTNE 126
                 445555555555533300334444444445555554 PP

  == domain 3  score: 15.2 bits;  conditional E-value: 4.4e-06
        CMS1 176 srigiavGtpgRildLleeeslsvdeLkrivlDas 210
                 ++  i v tpgR+ dL++e+++++++++++vlD +
  KHJ34694.1 317 KKADIIVATPGRLNDLINEGCINLSKVEYLVLDEA 351
                 4667899**************************75 PP

>> LpxI_N  LpxI N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00022       0.5      42      85 ..     274     317 ..     260     331 .. 0.84
   2 ?   -1.5   0.0         1   2.2e+03       9      31 ..     498     520 ..     497     546 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00022
      LpxI_N  42 ivdevaevsvgqlgklikaLkregvtevvmaGkvekpklldlrp 85 
                 iv+++ e+ ++  +++ ++ k +gv+ v++ G+v+k++ +++ +
  KHJ34694.1 274 IVSPTRELAMQSYDQIHQLCKTSGVKAVCIYGGVPKDEQRKNSK 317
                 5678899999**************************99985544 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1
      LpxI_N   9 GrlPllvaeaakaagrevvvval 31 
                 G+ P+lva  + a+g ++  v+l
  KHJ34694.1 498 GNTPILVATDVAARGLDIPSVKL 520
                 899***********998876665 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.7   0.00074       1.7      12     118 ..     239     369 ..     235     384 .. 0.55

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00074
      AAA_22  12 GesGtGKTt.....llrrlleqldeeakaeeerpevvfvtlpsst..sskdllrellralglelka...................erlsseellealeq 84 
                 +e+G+GKT+     ++ r++++ +  ++   ++++ + v ++ +    s d  ++l++  g+++                       ++  +l +++++
  KHJ34694.1 239 AETGSGKTMafaipCVTRITSSIQSKSYV--KGVRALIVSPTRELamQSYDQIHQLCKTSGVKAVCiyggvpkdeqrknskkadiIVATPGRLNDLINE 335
                 56777777622222233444443333333..33333333333333223333344444444433333455555444544444666655666677777777 PP

      AAA_22  85 alraravielliiDEaqh.lrseealeeLrsllnl 118
                  + + +++e l++DEa++ l  +   ee++++ n 
  KHJ34694.1 336 GCINLSKVEYLVLDEADRmL-DKGFEEEIKKIINT 369
                 7777777899********77.78888888888873 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (614 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2002  (0.111663); expected 358.6 (0.02)
Passed bias filter:                      595  (0.0331865); expected 358.6 (0.02)
Passed Vit filter:                        86  (0.0047967); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.84u 0.32s 00:00:01.15 Elapsed: 00:00:00.50
# Mc/sec: 3695.31
//
Query:       KHJ34695.1  [L=855]
Description: hypothetical protein EV44_g2421 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.5e-31  107.9   0.4    1.2e-30  107.0   0.0    1.7  2  SLS       Mitochondrial inner-membrane-bound regulator


Domain annotation for each model (and alignments):
>> SLS  Mitochondrial inner-membrane-bound regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.0   0.0   6.9e-35   1.2e-30       1     222 []     214     431 ..     214     431 .. 0.87
   2 ?   -2.9   0.1      0.27   4.9e+03      96     151 ..     471     521 ..     462     547 .. 0.58

  Alignments for each domain:
  == domain 1  score: 107.0 bits;  conditional E-value: 6.9e-35
         SLS   1 KeklierIlrecWkleiseevealgeleevklsprefflLltgngklLqnlsri....hgakielnrsenklritAtkstaeyieasineilknittet 95 
                 K++l+ r++recW++e+   +e++g++e ++++ + f+ Ll+g+   Lq + ++    +g+ +e+  s+n +r+t+t++    i ++i++++k+i+  +
  KHJ34695.1 214 KQRLAIRLIRECWNVELLPLMEGVGQFE-IQIRADIFEVLLSGKPLPLQTFYDEvltiDGEGLEVFWSRNVIRFTTTRARKYRISQEIEKLVKRIKILK 311
                 9***************************.**********************9999999***************************************** PP

         SLS  96 vdlsellkl........skvdklkdl.lseelleelgrltntvievseddn.nknskselkisalgedradlakRlLlwalgpsd.snkrlseallavt 183
                 ++l +l+           ++d++  + +++++l el +lt++ i+  +++n + + + +   s+++e ++d a+RlLl+a +p++  +++l +a     
  KHJ34695.1 312 LSLGDLMPVfddkhgteLRFDQWIRKtFNDQTLAELKQLTGVTIR--RETNgKISLGAIEDGSGFLEGPVDAARRLLLTARQPNYfGEHSLASAD---- 404
                 **6666655777888998899999999******************..5555555667778889******************77772222221111.... PP

         SLS 184 sssksknttlrlvekekdypfrdeeslpWkdrlkeWaRw 222
                          ++l   ++  ++ + + l+W  + ++W+Rw
  KHJ34695.1 405 ---------ISL---AAPINYCQVDGLNWWGKTRTWYRW 431
                 .........223...3455666689************** PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.27
         SLS  96 vd.lsellkl..skvdklkdllseelleelgrltntvievseddnnknskselkisalg 151
                 ++ +s+++k+  s++ + +++ s  ++  +g+l +++++       ++s +   +s+  
  KHJ34695.1 471 FSpVSQPAKKstSETLWSTKY-STSTFATMGALIHSHLD-------SKSREPPLLSSDF 521
                 334444444434444444444.88888888888888888.......3333333444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (855 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 5770.71
//
Query:       KHJ34696.1  [L=127]
Description: putative lsm domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-20   72.8   0.5    1.7e-20   72.5   0.5    1.2  1  LSM              LSM domain
  ------ inclusion threshold ------
      0.061   13.9   5.0      0.087   13.4   5.0    1.3  1  FoP_duplication  C-terminal duplication domain of Friend of P
       0.09   12.2   0.1      0.099   12.1   0.1    1.1  1  Peptidase_C74    Pestivirus NS2 peptidase


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.5   0.5   2.8e-24   1.7e-20       2      67 .]      43     111 ..      42     111 .. 0.97

  Alignments for each domain:
  == domain 1  score: 72.5 bits;  conditional E-value: 2.8e-24
                 HHHHTTTSEEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTET...EEEEEEEEEEEGGGEEEEEE CS
         LSM   2 flkklinkkvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkk...ekrklglvliRGnnivlisl 67 
                 +l+k+++kk+ v++ +gre++G+Lkg+D  mNlvL++vee ++d++   ++r+lglv++RG+  vlis+
  KHJ34696.1  43 DLSKYMDKKISVKMSGGREVIGVLKGYDALMNLVLDEVEESMHDEEnkiTTRSLGLVVVRGTLLVLISP 111
                 699*****************************************99*******************9986 PP

>> FoP_duplication  C-terminal duplication domain of Friend of PRMT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   5.0   1.5e-05     0.087      13      61 ..       3      49 ..       1      57 [. 0.78

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.5e-05
  FoP_duplication 13 grggrrgrgrggrggrggrgrgrggrggrkkkkpltkeeLDaeLDaYmg 61
                     +rg  rg+++++rggrggrg   g++g+ + ++p+ +  LD  L++Ym 
       KHJ34696.1  3 QRGQYRGNRGSNRGGRGGRGNYDGNKGSISMERPKKENILD--LSKYMD 49
                     68888888888889999999888888887788888888888..788886 PP

>> Peptidase_C74  Pestivirus NS2 peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.1   1.7e-05     0.099      64     110 ..      41      94 ..      37     127 .] 0.65

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.7e-05
  Peptidase_C74  64 tldfmyymhrkvieeisggtniisrlva..ali.....elnwsmeeeeskglkk 110
                     ld+  ym +k+  ++sgg ++i  l    al+     e++ sm +ee+k   +
     KHJ34696.1  41 ILDLSKYMDKKISVKMSGGREVIGVLKGydALMnlvldEVEESMHDEENKITTR 94 
                    58999******************9875322444111225667888888775543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 955.92
//
Query:       KHJ34697.1  [L=797]
Description: putative ubiquitin carboxyl-terminal hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.9e-38  130.8   0.0    8.1e-38  130.4   0.0    1.2  1  UCH         Ubiquitin carboxyl-terminal hydrolase
    2.4e-24   84.9   0.5    5.4e-23   80.5   0.0    2.5  2  zf-UBP_var  Variant UBP zinc finger
    5.7e-24   83.6   0.0    3.8e-11   42.6   0.0    2.5  2  UBA         UBA/TS-N domain
    3.1e-23   81.9   9.7    2.5e-18   66.1   1.5    3.6  3  zf-UBP      Zn-finger in ubiquitin-hydrolases and other prote
    3.3e-12   46.6   9.5    4.8e-10   39.5   4.1    3.9  2  UCH_1       Ubiquitin carboxyl-terminal hydrolase
  ------ inclusion threshold ------
      0.053   13.3   0.1       0.23   11.3   0.0    2.1  2  UBA_4       UBA-like domain
      0.054   13.5   0.1       0.23   11.4   0.0    2.1  2  HOIP-UBA    HOIP UBA domain pair
      0.077   13.2   0.0       0.24   11.6   0.0    1.8  1  UBA_5       UBA domain


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.4   0.0   3.6e-41   8.1e-38       1     257 []     302     794 ..     302     794 .. 0.89

  Alignments for each domain:
  == domain 1  score: 130.4 bits;  conditional E-value: 3.6e-41
                 -EES-SSSTHHHHHHHHHHHTSHHHH.HHHHTCHHCCSSTCCCCC-.TT.TTS.TT.HHHHHHHHHHHHHH.....SH-CCEE--HHHHHHHHHHSGGG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   1 tGlsNlGntCymnsvlQcLfsipelr.dyllsleevkkesrnkkelnesnplgkkg.elakalkdlfkell.....kskskavsPkklkktlsklaksf 92 
                 tGl+NlGn+Cy+ s+lQcLf++p+++ +y  s     +++  +++l+   +l k g  l+    +  +++      +  +k ++P++lk+ ++k +++f
  KHJ34697.1 302 TGLKNLGNSCYLASTLQCLFALPNFQeRYYHSG-DLPNVDDPAQDLE--TQLRKFGdGLLSGRYSHCSNIDhgsgnNADQKGIAPSMLKALIGKGHPEF 397
                 7*************************6666664.4444444444443..333443434555555555577789999889******************** PP

                 TSSSTCEHHHHHHHHHHHHHHHHCC.....................HCCCHHHHHHCCCTTSHHHHHH-EEEEE......................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx.....................xxxxxxxxxxxxxxxxxxxxxxxxxxxx......................... RF
         UCH  93 sgykqqDaqEflaflLdqlhedlnr.....................evaeekwkkhlkrndslitdlfegqlks......................... 145
                 s+++qqDa Efl ++++ + ++ +                      + ++ + +++++ n s+ + + +  +++                         
  KHJ34697.1 398 STMRQQDAFEFLLHVFNLITRSKHVpplkdpirsfrfvleqrlqciSCKKVRYQSNEQDNISILVPVRKLPTSNenlntsadkpveyeavslkecldnf 496
                 *******************998888899999999999999999998666777788888888888888888888899999999999999999******** PP

                 .....................EEEEEEB-SEEEEEEESEEETEE.EEE--SEEB--S.EEE-GGGBSS-BTTS-TCS-B.................... CS
                 .....................xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx.................... RF
         UCH 146 .....................klklkrlPeiLiihlkRfsynss.ksKlntkvefpe.eldlssylaeekkkkteekkk.................... 201
                                      +  +k++PeiLi++  Rf + ++ ++K n +v   + + +++ y++ + ++ +e  ++                    
  KHJ34697.1 497 tsdelvelncsscgskdgflkRSLFKTFPEILIVNARRFIIINWvPTKVNVPVFTDDeQFNMDDYISPGHQPWEELFPDseedsakpefipnedalqqi 595
                 *****************************************888788888887666449****999988888777666699999999999********* PP

                 ................................................................................................... CS
                 ................................................................................................... RF
         UCH 202 ................................................................................................... 201
                                                                                                                    
  KHJ34697.1 596 ecmgftrnqctralhatgnadvgsamdwlfshledpdidtplevsssvatmsdpavaitniddpekvemlqamgfslssvrkalretggdleravdwlf 694
                 *************************************************************************************************** PP

                 .......................................EEEEEEEEEES.CTTSEEEEEEEECTTTTE....EEEEETTEEEEE-HHCCCTTCEEEEE CS
                 .......................................xxxxxxxxxxx.xxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 202 .......................................YeLiavvvHsG.slssGHYvayiknekngk....WykydDetvkevkeeeevlssayiLf 256
                                                        ++L+++++H+G s +sGHYva+i+++  +     W+ y+De+v + ++ ee+++ ay+++
  KHJ34697.1 695 nhpddqgefssdaievdlypenkggklkeipgsnelpinFQLSSIICHKGaSIHSGHYVAFIRKKVPEDfsltWVLYNDEKVVQANDIEEMKKFAYVYL 793
                 **************************************************************94433337888************98889999999987 PP

                 E CS
                 x RF
         UCH 257 Y 257
                 +
  KHJ34697.1 794 F 794
                 5 PP

>> zf-UBP_var  Variant UBP zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.5   0.0   2.4e-26   5.4e-23       2      62 ..      12      75 ..      11      77 .. 0.96
   2 ?    1.9   0.1     0.087     2e+02      28      58 ..     184     224 ..     178     228 .. 0.79

  Alignments for each domain:
  == domain 1  score: 80.5 bits;  conditional E-value: 2.4e-26
  zf-UBP_var  2 rvpsssdkVyKdECvycFdtpesedGlyvcLkcFlgfck...khaekhaektghpvylnikrtk 62
                r ps  + Vy+++C++cFd+ +++dGl+vcL+cF+g+c+   +ha +ha  ++hp++lni+rt+
  KHJ34697.1 12 RPPSDAQAVYREDCTQCFDSIDDPDGLDVCLSCFNGGCSgerNHAVLHAISKDHPLVLNIRRTR 75
                67999*********************************************************97 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.087
  zf-UBP_var  28 lyvcLkcFlgfck..........khaekhaektghpvylni 58 
                 l  cL+c + +c           +h  +h +++gh+v++++
  KHJ34697.1 184 LWLCLECGNLGCGraqfgglqgnSHGLEHKNRSGHSVAVKL 224
                 667777777666667777777889*************9976 PP

>> UBA  UBA/TS-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.0   3.5e-13   7.8e-10       1      37 []     587     624 ..     587     624 .. 0.98
   2 !   42.6   0.0   1.7e-14   3.8e-11       2      37 .]     658     693 ..     658     693 .. 0.98

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 3.5e-13
                 TCHHHHHHHHHTTS-HHHHHHHHHHTTT.SHHHHHHHH CS
         UBA   1 edeeaiqrLveMGFdreevveALratgn.NeErAveyL 37 
                 ++e+a+q++  MGF+r+++ +AL atgn ++  A+++L
  KHJ34697.1 587 PNEDALQQIECMGFTRNQCTRALHATGNaDVGSAMDWL 624
                 69***********************************9 PP

  == domain 2  score: 42.6 bits;  conditional E-value: 1.7e-14
                 CHHHHHHHHHTTS-HHHHHHHHHHTTTSHHHHHHHH CS
         UBA   2 deeaiqrLveMGFdreevveALratgnNeErAveyL 37 
                 d+e+++ L++MGF+ + v++ALr tg+++ErAv++L
  KHJ34697.1 658 DPEKVEMLQAMGFSLSSVRKALRETGGDLERAVDWL 693
                 689********************************9 PP

>> zf-UBP  Zn-finger in ubiquitin-hydrolases and other protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   0.4   6.2e-07    0.0014      11      46 ..      38      72 ..      25      76 .. 0.80
   2 ?   -1.8   0.0       1.8     4e+03      16      26 ..     152     162 ..     142     168 .. 0.81
   3 !   66.1   1.5   1.1e-21   2.5e-18       1      63 [.     175     248 ..     175     249 .. 0.96

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 6.2e-07
                EEEETTT--EEE-TTTT-HHHHHHHHH---EEEETT CS
      zf-UBP 11 lWlCLkCghvgCgrksnghalkHyeetrHplavdls 46
                l +CL+C + gC   + +ha  H+ +++Hpl+++++
  KHJ34697.1 38 LDVCLSCFNGGCSG-ERNHAVLHAISKDHPLVLNIR 72
                668**********6.679***************987 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.8
                 TT--EEE-TTT CS
      zf-UBP  16 kCghvgCgrks 26 
                 +C h++C +++
  KHJ34697.1 152 SCEHILCLNQE 162
                 79999998765 PP

  == domain 3  score: 66.1 bits;  conditional E-value: 1.1e-21
                 -TTTH--.SSEEEETTT--EEE-TTT......T-HHHHHHHHH---EEEETTT--......EEETTTTEEBE-GC CS
      zf-UBP   1 CseCnsenknlWlCLkCghvgCgrks......nghalkHyeetrHplavdlstls......vycyscddevedke 63 
                 Cs C+   +nlWlCL+Cg+ gCgr++      n+h l+H + ++H +av+l++++      vycy+cd+e  d++
  KHJ34697.1 175 CSLCDLR-ENLWLCLECGNLGCGRAQfgglqgNSHGLEHKNRSGHSVAVKLGSITpegtadVYCYACDEERIDEN 248
                 9****99.***********************99************************************988875 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.2     0.012        27     125     168 ..      89     133 ..      54     191 .. 0.69
   2 !   39.5   4.1   2.1e-13   4.8e-10      97     320 .]     396     776 ..     302     776 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.012
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx RF
       UCH_1 125 seeesaieqllgtkaettirclkCgseksrksstlvldlkyP.kp 168
                 + + ++++++   +++t+ircl+C+  +  ks+ +  d++   ++
  KHJ34697.1  89 KISIAPVTEVELYDYHTKIRCLHCNIDSIDKSIGVLADMVDSiMN 133
                 555566666667799*************99999999988654432 PP

  == domain 2  score: 39.5 bits;  conditional E-value: 2.1e-13
                 xxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.x.....xxxx.........xxxxxxxx RF
       UCH_1  97 slssliq.sfnrflldqlekelketkknsseeesaieqllgtkaettirclkCgseksrksstlvldlkyP.k.....psne.........kkeakvtf 179
                 ++s++ q    +fll+ ++  ++++  +  + +++i   +++ +e++++c++C++ + +++    +++  P +     +  e          + + v++
  KHJ34697.1 396 EFSTMRQqDAFEFLLHVFNLITRSK--HVPPLKDPIR-SFRFVLEQRLQCISCKKVRYQSNEQDNISILVPvRklptsN--EnlntsadkpVEYEAVSL 489
                 4555555258899999877776554..3467888888.899**************997777777777778873465441..145556555544445677 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx......................................... RF
       UCH_1 180 asilksslerekttrawCekCkryqpteqrktvknlPpvLalnakle.eeeelelwkt......................................... 236
                 +++l ++ +  +  +  C++C ++  + +r+ +k +P++L++na ++   +    w                                           
  KHJ34697.1 490 KECLDNFTSD-ELVELNCSSCGSKDGFLKRSLFKTFPEILIVNARRFiIIN----WVPtkvnvpvftddeqfnmddyispghqpweelfpdseedsakp 583
                 8888887777.777899****************************874333....44345666666667777778999999999999999999999999 PP

                 ................................................................................................... RF
       UCH_1 237 ................................................................................................... 236
                                                                                                                    
  KHJ34697.1 584 efipnedalqqiecmgftrnqctralhatgnadvgsamdwlfshledpdidtplevsssvatmsdpavaitniddpekvemlqamgfslssvrkalret 682
                 999999999999999999999999999999999999999999999999999999999999999999999999999998888888888887777777777 PP

                 .................xxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxx RF
       UCH_1 237 .................knwlp.leiklsldedknleeklkeerekakaekeikvYeLqsvvvhigdskesghLvslvkvaekelerdppes...qWyl 314
                                  ++ ++   i+++l++    e+k  + +e   +++    ++L s+++h g s +sgh+v++++ +       +pe+    W+l
  KHJ34697.1 683 ggdleravdwlfnhpddQGEFSsDAIEVDLYP----ENKGGKLKEIPGSNELPINFQLSSIICHKGASIHSGHYVAFIRKK-------VPEDfslTWVL 770
                 77777776666666665322222444444444....3344445555566778899***********9988*********53.......4455568**** PP

                 xxxxxx RF
       UCH_1 315 FNDflV 320
                  ND +V
  KHJ34697.1 771 YNDEKV 776
                 ***766 PP

>> UBA_4  UBA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0         4     9e+03      10      26 ..     597     613 ..     595     614 .. 0.80
   2 ?   11.3   0.0    0.0001      0.23      12      42 ..     669     699 ..     651     700 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 4
       UBA_4  10 iTGadeekArqlLeann 26 
                   G++++++++ L a++
  KHJ34697.1 597 CMGFTRNQCTRALHATG 613
                 569999****9998776 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.0001
       UBA_4  12 GadeekArqlLeannWdLerAislyFdsgea 42 
                 G++   +r+ L+ +++dLerA++  F+++++
  KHJ34697.1 669 GFSLSSVRKALRETGGDLERAVDWLFNHPDD 699
                 4444899***************988888776 PP

>> HOIP-UBA  HOIP UBA domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       3.5   7.9e+03      97     127 ..     260     290 ..     258     294 .. 0.83
   2 ?   11.4   0.0    0.0001      0.23      13      94 ..     592     691 ..     589     696 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 3.5
    HOIP-UBA  97 lreRrkKvkelaslgffdreevveaLrqsgG 127
                 l eR+k  k+l ++++ ++++ + +++ + G
  KHJ34697.1 260 LAERQKTEKSLTEMQIDENSRWEFSMTDNDG 290
                 7789999999999999999999888888887 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.0001
    HOIP-UBA  13 lreaekkgvspeevqaalrvsgkss..npldWLktelpel.ldevaalaaseqkekke...............nevgklsraEakealleagGdvekAv 93 
                 l++ e  g++ ++   al+ +g+    +++dWL ++l++  +d+  + ++s+   +++                +++ +s + +++al+e+gGd+e+Av
  KHJ34697.1 592 LQQIECMGFTRNQCTRALHATGNADvgSAMDWLFSHLEDPdIDTPLEVSSSVATMSDPavaitniddpekvemLQAMGFSLSSVRKALRETGGDLERAV 690
                 566677788888888888888887778888888888876437777777666665555577888888888887767777888889999999999999988 PP

    HOIP-UBA  94 k 94 
                  
  KHJ34697.1 691 D 691
                 6 PP

>> UBA_5  UBA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00011      0.24      18      52 ..     590     623 ..     571     631 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00011
       UBA_5  18 eslaqmlsmGfsdeGGWltrllq.tknydiGaalda 52 
                 ++l q+  mGf+ +    tr l+ t n d+G+a+d 
  KHJ34697.1 590 DALQQIECMGFTRNQ--CTRALHaTGNADVGSAMDW 623
                 5799********985..699888588*********6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (797 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       678  (0.0378158); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.70u 0.28s 00:00:00.98 Elapsed: 00:00:00.46
# Mc/sec: 5246.84
//
Query:       KHJ34698.1  [L=508]
Description: putative ubx domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-09   36.8   0.0    7.4e-09   35.3   0.0    1.7  2  UBA_4     UBA-like domain
    4.4e-06   26.8   0.0      1e-05   25.7   0.0    1.6  1  UBX       UBX domain
  ------ inclusion threshold ------
        2.7    8.5  10.6        6.5    7.3  10.6    1.6  1  APG6_N    Apg6 coiled-coil region


Domain annotation for each model (and alignments):
>> UBA_4  UBA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   1.2e-12   7.4e-09       3      41 ..      18      55 ..      17      57 .. 0.92
   2 ?   -3.2   0.0       1.3   7.6e+03      18      28 ..     235     245 ..     233     246 .. 0.80

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 1.2e-12
       UBA_4  3 liaqFqaiTGadeekArqlLeannWdLerAislyFdsge 41
                ++++++a+TG++ ++A+ lL++++W +e+Ais +Fd ge
  KHJ34698.1 18 ALESYTAVTGQNIQEAIPLLRRSQWSVEIAISKFFD-GE 55
                57899*******************************.44 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.3
       UBA_4  18 ArqlLeannWd 28 
                 ++++L+ + ++
  KHJ34698.1 235 VQEFLQKSENN 245
                 57899999988 PP

>> UBX  UBX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   0.0   1.7e-09     1e-05       7      80 ..     406     496 ..     401     497 .. 0.87

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 1.7e-09
                 EEEEEEETT...STEEEEEEESSSBHHHHHHHHHHHCCCCCTS...............EEEEETTTTEEGGCCCCSBCCCCTTTSCEEEEEE CS
         UBX   7 trlqiRlpd...GsrlvrrFkksdtlesvyeyVdsklfekeep...............FqLltsfPrreltksdkktLsdlgllpnstlvle 80 
                 +++++++p      r  r+F+++d +e++y+yV+     ++++               F L++s+Pr  +  ++  t+ +  + +n++l++e
  KHJ34698.1 406 VKVALKMPEnlgAGRVIRKFRANDGIEELYAYVECFELLQSDNhltaskpmdydheyqFLLVQSLPRVVFHVNQGDTIGEK-IGKNGNLIVE 496
                 56666666533225899*****************9988888888999***************************9*****9.********98 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3  10.6    0.0011       6.5      31     111 ..     302     385 ..     298     392 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0011
      APG6_N  31 flkklkkekkeeek...qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynelqle 111
                 +l+kl+    + e+        +++++  ++l+++++++ e   +l++er++l++e  a+++e++++e + ++    y e++l+
  KHJ34698.1 302 YLSKLRVAIMKHEEqlsIARTNRSAQDLERNLRQQQDSAYERSLALDRERARLKKEADAAAAEAKRIEMNRQATAALYAEKKLQ 385
                 5555554433333223222233344444566999***************************************99999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1044  (0.0582297); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.43
# Mc/sec: 3570.21
//
Query:       KHJ34699.1  [L=186]
Description: putative iron sulfur cluster assembly protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-53  180.5   0.0    1.6e-53  180.2   0.0    1.1  1  NifU_N    NifU-like N terminal domain
  ------ inclusion threshold ------
      0.097   12.9   0.0       0.17   12.1   0.0    1.3  1  TSCPD     TSCPD domain


Domain annotation for each model (and alignments):
>> NifU_N  NifU-like N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.2   0.0   1.8e-57   1.6e-53       1     126 [.      39     163 ..      39     166 .. 0.98

  Alignments for each domain:
  == domain 1  score: 180.2 bits;  conditional E-value: 1.8e-57
                 CSCHHHHHHHHSSSSBSS-TTSSS--EEEEEEETTTTEEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHHHHHTTSBHHHHCCCCHHHHHHHHTC CS
      NifU_N   1 aysdkvldhyknPrnvGvleeedakvgvgevgapacGDavrLqikvdeetdriedakFktfGCgsaiAssslltelvkgktleealkitnkeiaeelgg 99 
                 +y++kvldhy+ PrnvG+++++d++vg+g vgapacGD+++Lqi+vd  +++i d+kFktfGCgsaiAsss+ltelv g+tl+ea++i+n+eia+el+ 
  KHJ34699.1  39 QYHEKVLDHYSRPRNVGSMSKTDTDVGTGLVGAPACGDVMKLQIRVDPTNNKISDVKFKTFGCGSAIASSSYLTELVRGMTLDEASRIQNSEIAKELC- 136
                 69************************************************************************************************. PP

                 SCSSSCHCSCHHHHHHHHHHHHHHHHC CS
      NifU_N 100 lpkeklhcsvlaedalkaavkkYkakk 126
                 lp++klhcs+laeda+k a+++Y ak+
  KHJ34699.1 137 LPPVKLHCSMLAEDAIKSAISDYYAKN 163
                 ************************998 PP

>> TSCPD  TSCPD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.9e-05      0.17       7      49 ..      74     124 ..      71     131 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.9e-05
       TSCPD   7 Cs..reieievd..dkliknvkfvg.GCngnlkg...iskLvegmkveevi 49 
                 C+  ++++i vd  +++i++vkf   GC + + +   +++Lv+gm+ +e+ 
  KHJ34699.1  74 CGdvMKLQIRVDptNNKISDVKFKTfGCGSAIASssyLTELVRGMTLDEAS 124
                 6644566666776577******9644**77765523378999****99975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.23s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1440.90
//
Query:       KHJ34700.1  [L=500]
Description: hypothetical protein EV44_g0850 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1315  (0.0733449); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 3861.86
//
Query:       KHJ34701.1  [L=555]
Description: putative cd209 antigen [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.097   12.8   0.2      0.097   12.8   0.2    3.2  3  TAFH             NHR1 homology to TAF
        9.7    5.9  11.4         17    5.1   1.1    3.7  3  Alpha-E          A predicted alpha-helical domain with a cons


Domain annotation for each model (and alignments):
>> TAFH  NHR1 homology to TAF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.2   1.1e-05     0.097      14      60 ..      43      89 ..      39      92 .. 0.92
   2 ?   -0.5   0.8      0.15   1.3e+03       9      56 ..     122     169 ..     117     172 .. 0.79
   3 ?   -2.1   0.1      0.47   4.2e+03      17      55 ..     206     245 ..     199     266 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.1e-05
        TAFH 14 klagkqspevaenvkeLvqelldgkiepeeftsklqeelnsspqPyl 60
                 la+++++  +++v++ + + ++++++ eeft+++ e l s+++P l
  KHJ34701.1 43 SLADRENEIKQKAVNQSICDAVSAAVNSEEFTKAVAEHLASELKPSL 89
                6888899999999********************************86 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.15
        TAFH   9 LatLiklagkqspevaenvkeLvqelldgkiepeeftsklqeelnssp 56 
                 L+t ++  +   ++   n++e ++++ + + ++ee  ++l+e+ +s++
  KHJ34701.1 122 LSTILETNNASTAKKISNIEESINNITKIQGDIEEKFKSLEEQQKSQL 169
                 566666666666777788899999999999999999999999999886 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 0.47
        TAFH  17 gkqspevaenvkeLvqelldgkiepeef.tsklqeelnss 55 
                 +  spe  +   ++ ++l +++++ +e  t+ l  ++  s
  KHJ34701.1 206 TTPSPELTKSLDTILKTLDQNSLKLDEVkTNDLSSDIMTS 245
                 5556777777777777777777776664133455555444 PP

>> Alpha-E  A predicted alpha-helical domain with a conserved ER motif.
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   1.1    0.0018        17      37     114 ..     141     225 ..     117     258 .. 0.59
   2 ?    3.2   0.6    0.0073        65      36      91 ..     262     323 ..     242     327 .. 0.68
   3 ?    2.5   0.1     0.012     1e+02     231     289 ..     479     537 ..     472     539 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0018
     Alpha-E  37 eeewrallaalgaeegf....eeryeeaeleevlkfllldeenpgSiasclraarenaravRerl....ssemWevlnelylelke 114
                 ee+++++ ++ g+ e+     e ++++++l +v  +++  +e+ ++i s+l+a  e+ar+v e+     s+e+ ++l++   +l +
  KHJ34701.1 141 EESINNITKIQGDIEEKfkslE-EQQKSQLDHVAAEIVIIQEKFSTISSSLSAQIESARKVIEAAattpSPELTKSLDTILKTLDQ 225
                 5666666666666655544421.223334899999999999999988888888888888887654222256666666655555553 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.0073
     Alpha-E  36 e..eeewrallaalgaeegfeeryeeae.....leevlkfllldeenpgSiasclraarenar 91 
                 +  +++ ++l+++++ ++++e+  ++       + + +k ll d++ ++S+a  l++a+++ +
  KHJ34701.1 262 SlkQSNEKSLINTVELKSETEKISSS-LittidQIDNIKTLLSDSKTSNSLAEILAEAKTSNE 323
                 13366667777777777777554422.12345666669*******************998765 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.012
     Alpha-E 231 laalspaeseegrsseaerllgellaelrladieelleglhelldelqeelaelsdais 289
                 +++l+ ++++ ++ +++ ++l+ ++++++l+ i+el+++l +  ++ +++l++l++ai+
  KHJ34701.1 479 ISNLETQSKQISDVKSSMEALASIDKKVDLTPINELINDLSSKFESQLATLNDLKTAIK 537
                 33443334445566677889999**************9999999999999999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2176  (0.121368); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.99u 0.29s 00:00:01.28 Elapsed: 00:00:00.45
# Mc/sec: 3687.53
//
Query:       KHJ34702.1  [L=281]
Description: putative atg5 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-48  165.5   0.5    5.3e-48  163.6   0.5    1.8  1  APG5      Autophagy protein Apg5


Domain annotation for each model (and alignments):
>> APG5  Autophagy protein Apg5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.6   0.5   2.9e-52   5.3e-48       2     228 .]      78     261 ..      78     261 .. 0.95

  Alignments for each domain:
  == domain 1  score: 163.6 bits;  conditional E-value: 2.9e-52
        APG5   2 hlPiGvlyDlltaseeesksaasseaiseknlPwrLtlhfkeypenellpldageeslkdsfinslKeAdfirngsakkvmnLskedqeqLWqsvknhd 100
                 +lP+G+lyDl+                 ++ lPw+L l           pl+    +++d+fins+KeAdf+rng+ak +m++ske+++qLW+sv+++d
  KHJ34702.1  78 NLPVGLLYDLY-----------------QPLLPWQLSLGNG--------PLY----EMHDTFINSVKEADFVRNGTAKGIMSMSKENSTQLWNSVQDND 147
                 69********9.................457*******987........788....8****************************************** PP

        APG5 101 ldkfwsinskllpspekkkvreiPiriylpdankdqt..esekviqelvpplkedgqpqtLgdllsellpelfpskkkkekasssekeegsaaelakvl 197
                 +  f++i++ ll++p+  ++++iP+r+y+p+ ++ +t   s +viq lvpp +++++ q++g++ls +lp+lfps+ ++               la+++
  KHJ34702.1 148 FRAFHKIHQVLLNPPT--PLKHIPLRLYVPSVPNATTgfSSFNVIQMLVPPITASQEIQSVGSALSLTLPTLFPSRGEEI--------------LAQPI 230
                 **************98..9**************8888999**********************************777764..............559** PP

        APG5 198 iqGievpleaplawlaanlsypDgFlhivvv 228
                 ++G+ vp++apl +l+++++y+Dg+lh++++
  KHJ34702.1 231 LHGAPVPFHAPLIDLMKEAAYADGWLHVCIR 261
                 *****************************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       263  (0.014669); expected 358.6 (0.02)
Passed bias filter:                      257  (0.0143343); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2217.30
//
Query:       KHJ34703.1  [L=518]
Description: putative oligosaccharide translocation protein rft1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.4e-106  357.3  29.7    3.6e-56  191.0  10.9    2.0  2  Rft-1     Rft protein
  ------ inclusion threshold ------
      0.026   14.8   0.6      0.026   14.8   0.6    2.5  2  DUF4022   Protein of unknown function (DUF4022)


Domain annotation for each model (and alignments):
>> Rft-1  Rft protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.8  10.8   1.3e-54   1.1e-50       5     215 ..      37     290 ..      34     295 .. 0.93
   2 !  191.0  10.9     4e-60   3.6e-56     277     492 ..     295     513 ..     292     518 .] 0.92

  Alignments for each domain:
  == domain 1  score: 172.8 bits;  conditional E-value: 1.3e-54
       Rft-1   5 gatflillQlisrlitFllNqllvrflsprilGitvrLelllstiLFlSREairlavlriksk.................................... 67 
                 ++ +li  Q+ sr +tF+ Nq+l+r+lsp++lGi+++Lel + tiLF+SRE++r  ++r++ +                                    
  KHJ34703.1  37 NTILLIAQQIGSRFLTFIANQILLRYLSPDLLGISMQLELYILTILFFSRESLRITIQRQHIEssithqsqyklitnnnvninsnnndenkiknknfem 135
                 567899*****************************************************887799********************************** PP

       Rft-1  68 ......kkkseslqkvvnlalipvligivlsivli.lwq..yslsneellqlpyfklsvllvalsiiiellseplyvvaqaelnvklrskleslavlvr 157
                       ++ s ++q+++nl +i++ +gi +s++l+ l++   ++ + +++++p  ++s++l++++ i+ell+ep+yvv q + +   r++ es+a+++r
  KHJ34703.1 136 kklfdiQTASGQIQAIINLTYISLALGIGISFFLAwLFLgsLHTRDLAIIEMPNLRISLILFGCASILELLAEPCYVVVQLKSRHYIRVASESTATVFR 234
                 ******9***************************97666545566677899************************************************ PP

       Rft-1 158 clvtfaiivlfekeakegiailaFalgqlaysltllllyyvdflknlkkkkkfslklt 215
                 cl+t+++ ++++++ + +i++l+Falgqlays++ll++yy+++++    +++fsl ++
  KHJ34703.1 235 CLTTCISAIYASEN-HLEIGVLPFALGQLAYSISLLVVYYLKVIQISS-NEEFSLLPR 290
                 **********9999.69**************************66655.778887665 PP

  == domain 2  score: 191.0 bits;  conditional E-value: 4e-60
       Rft-1 277 SLvaRlvfaPiEEslrlffakll..sskkskknlkesvevLlnllklylylsllivifGpsyssflLqlliGskwsstsvldllrvYclyipllalNGi 373
                  LvaRl+++PiEE +r +f kll  ++++s+k + ++ + L +l   yl++s+++v +Gp++++f+L++++G++ws+t++ ++l++Yc+yiplla+NG 
  KHJ34703.1 295 PLVARLILQPIEEMSRNYFGKLLsaADNNSTKVIIKVRKSLFQLFYSYLIFSIFVVSLGPTAAPFVLKIIVGPRWSETGAGKVLAFYCYYIPLLAINGL 393
                 59*********************877889999999**************************************************************** PP

       Rft-1 374 lEaFvqsvassaqllkqsylmvvfSvvfllasyllievlklgaeGlilaNivNmllRiiyslrfikkfykklklekslrellpsalvval.llvsliig 471
                  EaFv+s+a+++++++q ++m+vfS++f  a++l+++v+++ga G ++aN +Nm++Ri++++ fik++  + +++++l++l+p ++++a+ ++vs+i+ 
  KHJ34703.1 394 AEAFVSSAATESEIHHQTAWMFVFSIAFSGAAFLFLKVYQIGALGIVVANSINMIFRITWAIFFIKSYLWRWQVNMKLESLIPRPITIAAgIAVSAILP 492
                 *****************************************************************************************9999999988 PP

       Rft-1 472 yvvelsknllqlligillall 492
                  ++  +++l  l+  +++a+ 
  KHJ34703.1 493 QLEIDDHSLFSLFKIVAAAAG 513
                 884444444444444444443 PP

>> DUF4022  Protein of unknown function (DUF4022)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.6   2.9e-06     0.026      48      75 ..     189     217 ..     148     219 .. 0.84
   2 ?   -3.2   0.1       1.2   1.1e+04      43      64 ..     484     505 ..     479     516 .. 0.59

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.9e-06
     DUF4022  48 clllsl.llgtasilgllaapayffiqlt 75 
                  l +sl l+g asil lla p y  +ql 
  KHJ34703.1 189 NLRISLiLFGCASILELLAEPCYVVVQLK 217
                 566777256******************96 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.2
     DUF4022  43 gikysclllslllgtasilgll 64 
                 gi  s +l  l +   s++ l+
  KHJ34703.1 484 GIAVSAILPQLEIDDHSLFSLF 505
                 6667777777766666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (518 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1240  (0.0691617); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 3664.66
//
Query:       KHJ34704.1  [L=416]
Description: putative transcription factor cys6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.027   14.6  13.7      0.071   13.3  13.7    1.6  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3  13.7   3.9e-06     0.071       2      31 ..     341     370 ..     340     376 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.9e-06
                 S-HHHHHCT---STSSSS-HHHHHCTHHHC CS
     Zn_clus   2 aCdnCrkkKvKCdakkPaCsnCkklnleCt 31 
                 +Cd+Cr+ K  C ++  aC+ C k+ ++C+
  KHJ34704.1 341 PCDRCRRLKFECVKHLTACQACTKKHAKCS 370
                 6****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (416 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       788  (0.0439511); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3131.27
//
Query:       KHJ34705.1  [L=67]
Description: hypothetical protein EV44_g3346 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (67 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       165  (0.00920297); expected 358.6 (0.02)
Passed bias filter:                      151  (0.00842211); expected 358.6 (0.02)
Passed Vit filter:                         5  (0.000278878); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.25s 00:00:00.59 Elapsed: 00:00:00.40
# Mc/sec: 501.67
//
Query:       KHJ34706.1  [L=526]
Description: putative udp-galactopyranose mutase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.3e-08   34.1   0.0    4.8e-08   33.1   0.0    1.6  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain
    2.7e-05   23.7   0.0     0.0002   20.8   0.0    2.0  1  Amino_oxidase  Flavin containing amine oxidoreductase
     0.0011   18.3   0.0      0.034   13.4   0.0    2.2  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
     0.0025   17.1   0.0     0.0081   15.4   0.0    1.8  2  Thi4           Thi4 family
     0.0033   16.7   0.2     0.0063   15.8   0.2    1.4  1  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
     0.0059   15.9   0.0     0.0086   15.4   0.0    1.2  1  FAD_binding_3  FAD binding domain
  ------ inclusion threshold ------
       0.01   15.8   0.2       0.12   12.4   0.0    2.6  4  NAD_binding_9  FAD-NAD(P)-binding
      0.023   14.3   0.0      0.047   13.3   0.0    1.6  2  DAO            FAD dependent oxidoreductase
       0.14   12.4   0.0       0.42   10.9   0.0    1.8  2  TrkA_N         TrkA-N domain
       0.19   10.4   0.0       0.32    9.6   0.0    1.3  1  HI0933_like    HI0933-like protein
       0.23   10.5   0.1       0.47    9.4   0.1    1.5  1  Lycopene_cycl  Lycopene cyclase protein


Domain annotation for each model (and alignments):
>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   0.0     3e-11   4.8e-08       1      58 [.      27      84 ..      27      94 .. 0.88

  Alignments for each domain:
  == domain 1  score: 33.1 bits;  conditional E-value: 3e-11
                   EE--SHHHHHHHHHHHCC.TEEEEEE-SSSSSSGGG-EECET.TCEECTS---EEETTHH CS
  NAD_binding_8  1 IvGaGlsGlvaAylLaka.gfdvlllekrdrlGGraasyevp.gvrvdygahifhgsgyy 58
                   I+GaG +Gl aA +L++  g + l+++ ++ +GG a++ + p g+ +d+g h++++ + y
     KHJ34706.1 27 IIGAGPTGLGAAKRLHQLdGPSWLIIDVNEIPGGLASTDSTPeGFLYDVGGHVIFS-H-Y 84
                   9****************66********************99626*********998.3.4 PP

>> Amino_oxidase  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   1.2e-07    0.0002       2     266 ..      33     290 ..      32     310 .. 0.78

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 1.2e-07
                    HHHHHHHHHHHTT.EEEEEEESSSSSBTTS-EEEET.TEEEESS--EEETTTHHHHHHHHHTTCCCCEEEESCCGCEEEEETTEECC...TTEECH CS
  Amino_oxidase   2 aGLaaArqLlsaG.fdVtvlEardrvGGRirtvrsd.GylielGamwftgagnpllellkelgledslslpdpgapkrvlskggref...pgdlsp 92 
                    +GL aA++L++   ++ +++  ++ +GG ++t+  + G+l+++G+++++ +++ +   ++e  l+      +p+ +++   ++  ++   ++ ++ 
     KHJ34706.1  33 TGLGAAKRLHQLDgPSWLIIDVNEIPGGLASTDSTPeGFLYDVGGHVIFSHYTYFDDCIDE-ALP------NPEDWYTH--QRISYVrckNCWVPY 119
                    7********99877************************************55544444444.444......44422222..222222334666666 PP

                    H.HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHTSTT...TTCB CS
  Amino_oxidase  93 v.paewealleqgalsaellsleeklrlgleallqktldeldldskslaesleelgrrepgdvevwdrliepelfaklefasglfagdp...sels 184
                      ++++ +l ++++++     + +++ ++l a +         +  +++e++ +  + +  d      +++p +f+   +    + + +   + + 
     KHJ34706.1 120 PfQNNVSMLPKDEQVK----CIDGMIDAALIART------ATSKPADFDEWIVRMMGTGIAD-----LFMRPYNFKVWAVPTTKMQCAWlgeRVAA 200
                    6577788888877777....67899999999988......999999*****99999999988.....99999999999999999999999986666 PP

                    HHHHTCCCCHHHHHTSCCCEE........TTHTHHHHHHHHHTTTTEEEETSEEEEEEEEETTCEEEEETTSTEEEESEEEE-S-HHHHH CS
  Amino_oxidase 185 aklalpllwelegfggslllp........rgGlsqlpealaeelrgldirlntrVkeikregdgvtvtledgevveaDaVvvTvplgvlk 266
                     +++   +     ++++ + p        r+G + + +a+a++l++ + +++++   +k + ++ tvtl+ g+++++ + ++T+ ++ l+
     KHJ34706.1 201 PDVKTCVRNVILNKSAGNWGPnatfrfpaREGTGGIWKAVARTLPESKKLFGKENEVVKVDTETHTVTLKGGKSIRYNKLISTMAVDQLA 290
                    6666666666666666777778888*******99999999997777777777766666667799999999**************999999 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   2.1e-05     0.034       2      33 ..      24      55 ..      23      73 .. 0.78
   2 ?    2.6   0.0     0.039        64      71     104 ..     253     281 ..     188     294 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.1e-05
                 SEEEE--SHHHHHHHHHHHH.HTS-EEEEETTH CS
                 xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx RF
  Pyr_redox_2  2 dvvviGgGpAGlaaaltlaq.agakvtlveleg 33
                 dv++iG+Gp Gl aa++l q  g   +++ + +
   KHJ34706.1 24 DVLIIGAGPTGLGAAKRLHQlDGPSWLII-DVN 55
                 89******************446666666.444 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.039
                  HCCTCEEEEESCEEEEETEEECTCEEEEEESEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  71 lgeevvkidpgkkkvklekkkegdeekiaydklv 104
                  +++evvk+d++ ++v+l     + +++i y+kl+
   KHJ34706.1 253 KENEVVKVDTETHTVTL-----KGGKSIRYNKLI 281
                  2345*************.....345589998887 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0     5e-06    0.0081      11      55 ..      16      60 ..       9      64 .. 0.80
   2 ?   -3.8   0.0       3.8   6.2e+03      39      62 ..     200     223 ..     195     226 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 5e-06
                HHHHHTEEEEEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--T CS
        Thi4 11 dllkyaesDvvivGaGssGLtaayylakkpdlkvailersvspGG 55
                d l + + Dv+i+GaG++GL aa+ l +  +   +i++ +  pGG
  KHJ34706.1 16 DNLPFSQVDVLIIGAGPTGLGAAKRLHQLDGPSWLIIDVNEIPGG 60
                55678999****************999876666677766665655 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 3.8
                 CTTS-EEEEESSSS--TTTTTTST CS
        Thi4  39 kpdlkvailersvspGGGawlGGq 62 
                 +pd+k+++ +  +    G w+   
  KHJ34706.1 200 APDVKTCVRNVILNKSAGNWGPNA 223
                 489999999999999999998655 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.2   3.9e-06    0.0063       1      32 [.      26      57 ..      26      61 .. 0.93

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 3.9e-06
  Pyr_redox_3  1 iIiGaGPaGlaaaielkkagledylilEkgni 32
                 +IiGaGP Gl+aa  l +++  ++li++ ++i
   KHJ34706.1 26 LIIGAGPTGLGAAKRLHQLDGPSWLIIDVNEI 57
                 6**************************97765 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   5.3e-06    0.0086       2      22 ..      23      43 ..      22      56 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 5.3e-06
                   EEEEEE--SHHHHHHHHHHHH CS
  FAD_binding_3  2 tdVlIVGaGpaGlmlallLse 22
                   +dVlI+GaGp+Gl +a+ L++
     KHJ34706.1 23 VDVLIIGAGPTGLGAAKRLHQ 43
                   89**************99987 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   7.1e-05      0.12       2      44 ..      27      64 ..      26      76 .. 0.71
   2 ?   -4.1   0.0       8.5   1.4e+04      63      74 ..     151     162 ..     143     166 .. 0.78
   3 ?   -0.0   0.0      0.48   7.8e+02     105     152 ..     238     283 ..     235     286 .. 0.79
   4 ?   -4.0   0.0       7.9   1.3e+04      82      98 ..     449     465 ..     439     467 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.1e-05
  NAD_binding_9  2 ivGaGprGlavlerLlarakkkspleitlfdpsepgagrvwrt 44
                   i+GaGp+Gl +++rL +        +  ++d +e+  g+ ++t
     KHJ34706.1 27 IIGAGPTGLGAAKRLHQLD----GPSWLIIDVNEIP-GGLAST 64
                   9***************994....4444555555553.445555 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 8.5
  NAD_binding_9  63 tddpptfaeWlr 74 
                    t +p +f+eW+ 
     KHJ34706.1 151 TSKPADFDEWIV 162
                    567899999985 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.48
  NAD_binding_9 105 eellarlpegvtvevhraevvdleeradgqavlladgaslaadaVvLA 152
                    ++++++lpe+ ++   ++evv+++++    +v+l++g+s+++++++ +
     KHJ34706.1 238 KAVARTLPESKKLFGKENEVVKVDTETH--TVTLKGGKSIRYNKLIST 283
                    5677788888888888899999988766..589999999999988765 PP

  == domain 4  score: -4.0 bits;  conditional E-value: 7.9
  NAD_binding_9  82 aeeldpddfvpRalyGr 98 
                    ++el+++d ++R  +G 
     KHJ34706.1 449 LPELESKDILSRGRFGS 465
                    67899999999999986 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.9e-05     0.047       1      38 [.      24      64 ..      24     135 .. 0.89
   2 ?   -3.0   0.0       2.5     4e+03     115     303 ..     438     458 ..     412     498 .. 0.49

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.9e-05
                EEEEECTSHHHHHHHHHHHHT.T..EEEEESSSSTTSSGGG CS
         DAO  1 dvviiGGGiiGlstAyeLarr.g..VtllekgdiagsgaSg 38
                dv+iiG+G +Gl++A  L +  g   ++++ ++i+g  aS 
  KHJ34706.1 24 DVLIIGAGPTGLGAAKRLHQLdGpsWLIIDVNEIPGGLAST 64
                8*****************7654689*****99999965555 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.5
                 EEEHHHHHHHSTTSTTTSEEEEETTEEEEEHHHHHHHHHHHHHHTT-EEEESECEEEEEEEETCEEEEEEECTEEEEEEEEEEE--GGGHHHHHTTCTT CS
         DAO 115 lldaeevrelepalpgllgalfypdtgqvdpakltaalaraaealGveilegtevtgleeedgkvwgverttpgendaadavVnaaGawsdllgllkel 213
                  l++eev+++                                                                                         
  KHJ34706.1 438 TLEREEVLKRL---------------------------------------------------------------------------------------- 448
                 45554444443........................................................................................ PP

                 TSEEEEEEEEEEEEEECCTHSTGSGCSEEEEEEEETTTTEEEEEETTSEEEEEESSEEETTCSSTSCSHHHHHHHHHHHHHHSGGG..CGEE CS
         DAO 214 dlpispvrgqvlvlkplseklvspaailpvpetdddgrgvyvtprkdgrvlvGgtadeesgdddpevdeedidellealrklfPql..gdvl 303
                                                                                                   +P+l  +d+l
  KHJ34706.1 449 ----------------------------------------------------------------------------------LPELesKDIL 458
                 ..................................................................................3332222222 PP

>> TrkA_N  TrkA-N domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00026      0.42       1      31 [.      25      56 ..      25      58 .. 0.93
   2 ?   -3.4   0.0         7   1.1e+04      11      31 ..     238     264 ..     232     269 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00026
                EEEES-SHHHHHHHHHHHH.TTEEEEEEESSH CS
      TrkA_N  1 iiiiGlGrvGrslaeeLse.ggkdvvvidkde 31
                ++iiG+G +G   a++L++ +g++ ++id +e
  KHJ34706.1 25 VLIIGAGPTGLGAAKRLHQlDGPSWLIIDVNE 56
                68*****************999889****986 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 7
                 HHHHHHHHHTT......EEEEEEESSH CS
      TrkA_N  11 rslaeeLsegg......kdvvvidkde 31 
                 +++a++L e++      ++vv +d++ 
  KHJ34706.1 238 KAVARTLPESKklfgkeNEVVKVDTET 264
                 677777777443677665577777765 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.0    0.0002      0.32       2      33 ..      24      56 ..      23      60 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.0002
                 SEEEE--SHHHHHHHHHHHH.TT--EEEE-SSS CS
  HI0933_like  2 dviviGgGaAGlmaAisaak.rgkrVlllekak 33
                 dv++iG+G+ Gl aA ++++  g + l+++ ++
   KHJ34706.1 24 DVLIIGAGPTGLGAAKRLHQlDGPSWLIIDVNE 56
                 89***************9661556666677665 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1   0.00029      0.47       1      31 [.      24      53 ..      24      60 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00029
  Lycopene_cycl  1 DvvviGaGpAglslAarlteakpglkvvlie 31
                   Dv++iGaGp gl  A+rl ++  g++ ++i+
     KHJ34706.1 24 DVLIIGAGPTGLGAAKRL-HQLDGPSWLIID 53
                   9*****************.777888888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (526 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       491  (0.0273858); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.46
# Mc/sec: 3457.94
//
Query:       KHJ34707.1  [L=156]
Description: putative duf1754 superfamily protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    8.5e-14   52.1  12.5    8.5e-14   52.1  12.5    2.1  2  DUF1754     Eukaryotic family of unknown function (DUF1754)
  ------ inclusion threshold ------
      0.022   14.2  10.3      0.024   14.0  10.3    1.0  1  CDC27       DNA polymerase subunit Cdc27
        2.9    8.0   7.0        3.7    7.6   7.0    1.0  1  CAML        Calcium signal-modulating cyclophilin ligand


Domain annotation for each model (and alignments):
>> DUF1754  Eukaryotic family of unknown function (DUF1754)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.1  12.5   1.4e-17   8.5e-14       1      97 [.       6     119 ..       6     120 .. 0.81
   2 ?   -3.1   0.1       2.3   1.4e+04      27      38 ..     128     139 ..     123     149 .. 0.51

  Alignments for each domain:
  == domain 1  score: 52.1 bits;  conditional E-value: 1.4e-17
     DUF1754   1 eysevvgGkLKLKgkkivkegvkKkkkkkkkkskekkeeekekeeeekssaesda...................esekdkeeeeddseekkekeeeqen 80 
                 ey+ vv G+LKLKg+    +g +K kkkkkkk++++++ +++++e++++s  ++                    +  + + ++ d++ ++  +++   +
  KHJ34707.1   6 EYAPVVHGPLKLKGSG--PSGIRKIKKKKKKKKAHEENGSQNQNENSSKSIVQSIplsepsnpnknegeknisnKTHDLSLSKVDEHLDDTIDQDWAAG 102
                 79**************..5678888888888888877777777777777766666799**********999766555566667777777788888899* PP

     DUF1754  81 lTeAErkfeevrkKrlk 97 
                 +T +Er+fee+rkKrl+
  KHJ34707.1 103 KTASERAFEEMRKKRLM 119
                 ***************97 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 2.3
     DUF1754  27 kkkkkkskekke 38 
                 k +k++ +e ++
  KHJ34707.1 128 KTHKQRVEELNK 139
                 444444444444 PP

>> CDC27  DNA polymerase subunit Cdc27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0  10.3   4.1e-06     0.024     190     317 ..      28     154 ..      16     156 .] 0.74

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 4.1e-06
       CDC27 190 ttkekaekaasskaaslkkkasaksnimksffkakpaekkkkteakeqkveee...seeekekedkeleddsaaeeeeeeekstkkekrrqkk.lessd 284
                  +k+k++k+a++++ s+++++ ++++i++s+  ++p+++ k++ +k+ + + +     + +e+ d++ ++d aa +   e  ++++   r+k+ +++  
  KHJ34707.1  28 IKKKKKKKKAHEENGSQNQNENSSKSIVQSIPLSEPSNPNKNEGEKNISNKTHdlsLSKVDEHLDDTIDQDWAAGKTASERAFEEM---RKKRlMDRIA 123
                 45667777777888888889999999*****9999999999888888777777666345566666666777777777777788888...3344034433 PP

       CDC27 285 eeeeerekekekrkrlkkmmeDededdemedvp 317
                 +e    +++k++ ++l k ++  +e  +m  ++
  KHJ34707.1 124 KE--GLKTHKQRVEELNKYLSNLSEHHDMPRIG 154
                 33..3499**************99999998765 PP

>> CAML  Calcium signal-modulating cyclophilin ligand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   7.0   0.00063       3.7      30     139 ..      33     146 ..      23     150 .. 0.56

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00063
        CAML  30 kpeaedeeeeesevesklqldldkleslslssvskrvllgdssgakdksksstaerkgsklpdkkdsl...tkesseddsaelrkrergel.ssd..ea 122
                 k++ ++ee+ +++ +++ ++++ ++ +ls +s  ++   g+   +++++  s++++ + +l d+ d+     k +se   +e+rk++  ++ +++  ++
  KHJ34707.1  33 KKKKAHEENGSQNQNENSSKSIVQSIPLSEPSNPNKN-EGEKNISNKTHDLSLSKVDE-HLDDTIDQDwaaGKTASERAFEEMRKKRLMDRiAKEglKT 129
                 3333333333333344445555556666666666655.45543333333344444333.55665555444367788888999***99999964443455 PP

        CAML 123 srsprrglekyLsrfde 139
                 ++   + l+kyLs   e
  KHJ34707.1 130 HKQRVEELNKYLSNLSE 146
                 66667789****98765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2400  (0.133861); expected 358.6 (0.02)
Passed bias filter:                      798  (0.0445089); expected 358.6 (0.02)
Passed Vit filter:                        83  (0.00462937); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 1186.66
//
Query:       KHJ34708.1  [L=261]
Description: hypothetical protein EV44_g1824 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       754  (0.0420548); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.29s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1831.66
//
Query:       KHJ34709.1  [L=846]
Description: putative peptidase family m13 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.8e-82  277.4   0.2    3.6e-82  277.1   0.2    1.1  1  Peptidase_M13_N  Peptidase family M13
    1.7e-63  214.0   0.0    3.2e-63  213.1   0.0    1.4  1  Peptidase_M13    Peptidase family M13


Domain annotation for each model (and alignments):
>> Peptidase_M13_N  Peptidase family M13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  277.1   0.2     4e-86   3.6e-82       1     382 []      92     531 ..      92     531 .. 0.91

  Alignments for each domain:
  == domain 1  score: 277.1 bits;  conditional E-value: 4e-86
  Peptidase_M13_N   1 PCdDFYeyaCGnWlkehpipadkssygtfeelqeelekqlreileekpsskedak..........................avkkaktlYksCm 68 
                      PC DF e +CG+W+++ ++ +d++   t + +++++e  +++il++++++  +++                          +++k+k++Y++Cm
       KHJ34709.1  92 PCIDFEELVCGGWKEQYDLRSDQGDAFTGTVMADKTELAIKHILQASYPEI-SKHfglptlkssllrkvngseiprsideeNFNKMKSAYDTCM 184
                      9************************************99*****8777766.555699************************************ PP

  Peptidase_M13_N  69 dedaieklglkplldllkelgglds............nwkdkfdllellaklrrygidilfslgvdpdpkdpsknvlyldqpg.lglpdreyyl 149
                      de+ ++++g++pl++ + ++ +l++            +++d+++l el+ +++++gi+ l+sl  ++d ++p+  v+  ++p+ +glp+++yy 
       KHJ34709.1 185 DETLVKRKGIEPLNTAIGQIVNLFPvsetsiyekellTTEDEDQLSELIVYFEKLGIAGLVSLTASADERNPDLVVVKASPPSqIGLPAKAYY- 277
                      *********************9555556778888898888899******************************99*****88659********. PP

  Peptidase_M13_N 150 kerdekeeeileaykeylakllkllge.....................ea...aelaeevvefekklakitldseerrdpeklynpmtlaelqk 219
                           +++ il++y + la+++k l+                      e    + laeevv+fek+l+ ++ ++ +++d++k+yn ++l+   +
       KHJ34709.1 278 -----ENNAILQKYNATLAQIFKNLKLthwkndrrnlsqrlykdsinpEIsipDYLAEEVVNFEKRLSLASPNASDNNDVTKYYNSLSLDVAHM 366
                      .....35679*************652244555566666666665554411554669************9999999999***************9 PP

  Peptidase_M13_N 220 lapqidwkaylsallertsssekvivtepeylkklskllaettpkrtlanYllwrlvrelapylsdefrdakfefyktlsgreer...prwkrC 310
                      l+pqi +  +l+ l++++ s +++iv +p+y+k+l ++l+e +pk ++++Y++w++++ + ++++ e ++ +++f ++l+g++++   +rw+ C
       KHJ34709.1 367 LTPQIRLSNILKDLTPPDFSVKNLIVASPNYMKNLRTILQE-SPKGVIQAYFIWKFIQIFNKAIEAEETKPYNSFVNELQGKDPEsipDRWRIC 459
                      99***********999989999*****************66.*****************************************6669679**** PP

  Peptidase_M13_N 311 vsqvnsllgmalgrlyvkkyfpeeskkdveemvedikeafkerlkeldWmdeetkkkAleKldamklkigyP 382
                      +++vn  lg++l+r+y +k+f+e++k + e++v+dik +f + lk+++Wmd+e  + A++K+ ++ +kigyP
       KHJ34709.1 460 IGHVNYGLGWILSRFYLEKNFSEKAKITGERIVSDIKMSFIQILKNTKWMDQEIVDLAITKVRQIVQKIGYP 531
                      ***********************************************************************9 PP

>> Peptidase_M13  Peptidase family M13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.1   0.0   3.6e-67   3.2e-63       1     196 [.     593     792 ..     593     800 .. 0.97

  Alignments for each domain:
  == domain 1  score: 213.1 bits;  conditional E-value: 3.6e-67
  Peptidase_M13   1 NAyYqpeensivfpaailqppffdleypeavNyggiGaviaHEltHgfddqgvqfdkegnlaswltdedaeefkekakclieqfsevtepektk.. 94 
                    NAyY+p  n+ivfpa+i+q p+fd+e p+++Nyg+ G++ +HEl+H+fd +g q+d++g+ ++w+  +  ++f+e+a+c ++q+s++t p      
     KHJ34709.1 593 NAYYNPPGNEIVFPAGIMQFPIFDAELPQYINYGAFGSISGHELSHAFDSTGRQYDQNGKYTDWWSSKTVSNFEERAQCFVNQYSNFTVPGLDGkp 688
                    9****************************************************************************************9986679 PP

  Peptidase_M13  95 .avngaltlgEniADlggleiAyraykk.lksakeerlpelenltkdqlfFisyAqiwcekqsdeellrqllvdvHspaelRvngvlsnlpaFaea 188
                     +v+g+ltlgEniAD ggl++++ a+kk + ++ ++ lp+l+ +++dqlfF+++++ wc+k++ e+++ ++  d+Hsp + R+ g++ n  +F+e 
     KHJ34709.1 689 lHVDGKLTLGENIADIGGLTASFSAWKKrQATSPDQDLPGLDYFSQDQLFFVGFGNWWCSKSRTETAVARIYSDPHSPMRSRILGTMLNSREFKES 784
                    9***************************667889************************************************************** PP

  Peptidase_M13 189 Fnckegsk 196
                    F+c+  ++
     KHJ34709.1 785 FRCQGREP 792
                    ***97766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (846 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       660  (0.0368119); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.26s 00:00:00.93 Elapsed: 00:00:00.42
# Mc/sec: 6015.13
//
Query:       KHJ34710.1  [L=2119]
Description: putative hsp90-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.4e-23   82.8   0.4    5.9e-23   81.5   0.4    1.7  1  HATPase_c     Histidine kinase-, DNA gyrase B-, and HSP90-lik
    6.9e-19   68.1   0.3    3.1e-18   66.0   0.0    2.2  3  Response_reg  Response regulator receiver domain
    1.3e-18   67.0   3.4    1.1e-10   41.6   0.9    3.9  4  PAS_3         PAS fold
    1.1e-16   60.6   0.0    3.2e-16   59.1   0.0    1.9  1  HisKA         His Kinase A (phospho-acceptor) domain
      5e-07   29.9   0.0      0.057   13.7   0.0    3.7  3  PAS_9         PAS domain
    6.9e-06   26.0   0.0       0.23   11.4   0.0    3.1  3  PAS           PAS fold
    1.2e-05   25.5   0.0    3.7e-05   23.9   0.0    1.9  1  PAS_4         PAS fold
  ------ inclusion threshold ------
      0.039   14.0   0.0       0.68   10.0   0.0    2.5  2  PAS_8         PAS domain


Domain annotation for each model (and alignments):
>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.5   0.4   2.6e-26   5.9e-23       1     108 [.    1525    1644 ..    1525    1647 .. 0.88

  Alignments for each domain:
  == domain 1  score: 81.5 bits;  conditional E-value: 2.6e-26
                  EHHHHHHHHHHHHHHHHHHHHSTTTEEEEEEEE..........EE..TEEEEEEEESSSSSTTHHHTGTCSTTCH.HCSTCHTSTSSSHHHHHHHHH CS
   HATPase_c    1 gdekrLrqiisnlvdNavkfatkageieveika..........se..ddlvisveDnGiGipkedlkklfekfsq.ddstkrggggtGlGlsivkkl 84  
                  gd  r+rq++ n+++Na+kf t+ ge++ +++           +e    l++s++D+G+G ++e+ + +f +fsq d+st+r++ggtGlGl i+++l
  KHJ34710.1 1525 GDRFRIRQALLNVIGNAIKF-TTVGEVFTRCRIapfeeqkyntDEnkIMLEFSITDTGKGFSQEEAEIIFNPFSQiDSSTTRSQGGTGLGLVISRQL 1620
                  67889***************.8889997777766677655554225578888********************************************* PP

                  HHHTTTEEEEEEETTTEEEEEEEE CS
   HATPase_c   85 velmgGeiwvesepgrGttftftl 108 
                  vel+gG+++ +   g+G+tftft+
  KHJ34710.1 1621 VELHGGKMEGTAILGEGSTFTFTV 1644
                  **********8888********97 PP

>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       5.2   1.2e+04      14      87 ..    1440    1515 ..    1438    1521 .. 0.63
   2 ?   -2.6   0.0       2.7     6e+03      85     106 ..    1922    1943 ..    1900    1945 .. 0.82
   3 !   66.0   0.0   1.4e-21   3.1e-18       1     107 [.    1990    2103 ..    1990    2106 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 5.2
                    HHHHHHHTTEEEEEEESSHHHHHHHHHHHHESEEEEESSCSS..SEHHHHHHHHHHCTTTSEEEEEESSTSHHHHH CS
  Response_reg   14 lrqlleeegyeevaeaedgkealellkeekvdlillDinmpg..mdGlellkeireedpelpviiltahseeedav 87  
                    l ++l++e++  + + +++++ l  + ++  dl   D  m +   + +++ + ++e +++l  +++t h e +++v
    KHJ34710.1 1440 LDTVLNDEQLDYCNTISSSAQGLLAIINDILDLAKADAGMIKlvYSWFHVRSLVEEVNETLSTMAITKHLEVNYVV 1515
                    5566776666666677777777776666667777666666663235555555556666777777777777766665 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.7
                    HHHHHHHCTESEEEESSG-HHH CS
  Response_reg   85 davealkagaddflsKpfdpee 106 
                    d v+ +k +   f++Kp++p++
    KHJ34710.1 1922 DYVQLIKQNRITFIFKPVKPSR 1943
                    567788888899999*999876 PP

  == domain 3  score: 66.0 bits;  conditional E-value: 1.4e-21
                    EEEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHH.HHHH...ESEEEEESSCSSSEHHHHHHHHHHCT.....TTSEEEEEESSTSHHHH CS
  Response_reg    1 vlivdDdplvrellrqlleeegyeevaeaedgkealell.keek...vdlillDinmpgmdGlellkeireed.....pelpviiltahseeeda 86  
                    vl+v+D+ +++++l ++l + g+ +v+ a dg e+ e++   ++   + lil+D++mp+ dG+++++e+r+ +     +++p+++l+a+   +++
    KHJ34710.1 1990 VLVVEDNATNQKVLLKFLAKVGI-DVDLAHDGLECTEKVfG-NShcyYSLILCDLQMPNKDGYQACREVRAWEkkrnyKKIPIVALSANVMTDVV 2082
                    89*********************.***************63.44478**********************98886667778*************** PP

                    HHHHHCTESEEEESSG-HHHH CS
  Response_reg   87 vealkagaddflsKpfdpeeL 107 
                     ++ +ag + +++Kp+d ++L
    KHJ34710.1 2083 DRCNEAGFSNYITKPVDFKAL 2103
                    ****************99877 PP

>> PAS_3  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0      0.34   7.7e+02      61      78 ..    1086    1103 ..    1084    1111 .. 0.81
   2 !   41.6   0.9     5e-14   1.1e-10       5      88 ..    1094    1174 ..    1090    1175 .. 0.85
   3 !   12.2   0.0   7.5e-05      0.17       2      39 ..    1222    1257 ..    1221    1262 .. 0.91
   4 !   10.7   0.0   0.00023      0.51      47      73 ..    1349    1376 ..    1334    1381 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.34
       PAS_3   61 kdGeyrwveararvirde 78  
                  + Ge++wv +r+  +r +
  KHJ34710.1 1086 PTGEIVWVNSRYLTYRGQ 1103
                  67*********9988765 PP

  == domain 2  score: 41.6 bits;  conditional E-value: 5e-14
       PAS_3    5 serveeilGyspeellgkveswldlvhpeDrervrealqealkkgepyegeyRirrkdGeyrwveararvirdengkpvrvigv 88  
                  + r+  + G s e+l  +     + +h  Dr+ + ++++++l++ge++  + R+rr dG+yrw+ +ra+ +rd+ g +v++ g+
  KHJ34710.1 1094 NSRYLTYRGQSIESLHIN---PWSSLHTSDRDAYLKSWKHSLRTGEQFAMQARLRRFDGSYRWFYTRASGLRDSRGVVVQWHGT 1174
                  555555555555555555...55779********************************************************98 PP

  == domain 3  score: 12.2 bits;  conditional E-value: 7.5e-05
       PAS_3    2 iyvserveeilGyspeellgkveswldlvhpeDrervr 39  
                  ++++ ++   +G + ++ +g    ++d++hp+D++++ 
  KHJ34710.1 1222 TFANHQWLSFTGQHFDDSIGL--GFIDFIHPDDLAKCH 1257
                  699******************..**********99875 PP

  == domain 4  score: 10.7 bits;  conditional E-value: 0.00023
       PAS_3   47 kkge.pyegeyRirrkdGeyrwvearar 73  
                  ++g+ +y +e+R+r k+Geyrw   r++
  KHJ34710.1 1349 NDGQlSYCTEVRLRSKSGEYRWHLVRCV 1376
                  577889****************888776 PP

>> HisKA  His Kinase A (phospho-acceptor) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.1   0.0   1.4e-19   3.2e-16       1      67 []    1413    1478 ..    1413    1478 .. 0.97

  Alignments for each domain:
  == domain 1  score: 59.1 bits;  conditional E-value: 1.4e-19
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHC..T-HSSCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH CS
       HisKA    1 slgrflagvaHELrtPLsailgnaeaLkregklteelkeyletiesearrldhlvedlLdlsrieag 67  
                  s+++fl++++HE+rtPL +i+g+++ L ++  l++e+ +y +ti s+a+ l+++++d+Ldl++ +ag
  KHJ34710.1 1413 SKSKFLSNMSHEIRTPLIGISGMIDFLLDT-VLNDEQLDYCNTISSSAQGLLAIINDILDLAKADAG 1478
                  799************************997.999******************************997 PP

>> PAS_9  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00022      0.49       6     104 .]    1082    1180 ..    1077    1180 .. 0.85
   2 !   13.7   0.0   2.6e-05     0.057       4      57 ..    1212    1263 ..    1209    1275 .. 0.86
   3 ?    0.6   0.0       0.3   6.8e+02      61     102 ..    1354    1397 ..    1329    1399 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00022
       PAS_9    6 i.dnpdgrilyaNeaalrllGyspeevlgksitdlf.vtdpeanerlraaleqgrkkerevevvlirkngetfwvlltaspvkdddgelvgiivilr 100 
                  i   p g+i+++N   l+  G+s e +   +++ l  ++ +   +  ++ l++g+  +++ +  l+r +g++ w+  +as ++d+ g +v + +++ 
  KHJ34710.1 1082 IaMPPTGEIVWVNSRYLTYRGQSIESLHINPWSSLHtSDRDAYLKSWKHSLRTGE--QFAMQARLRRFDGSYRWFYTRASGLRDSRGVVVQWHGTSM 1176
                  334599*************997777777777777777777777788888888888..*********************************9999999 PP

       PAS_9  101 Dite 104 
                  Di e
  KHJ34710.1 1177 DIHE 1180
                  9976 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 2.6e-05
       PAS_9    4 ili.dnpdgrilyaNeaalrllGyspeevlgksitdlfvtdpeanerlraaleqg 57  
                  i+  + +dg i++aN ++l ++G+++++ +g  + d++  +p++  + + ++++g
  KHJ34710.1 1212 IFSaTEEDG-ITFANHQWLSFTGQHFDDSIGLGFIDFI--HPDDLAKCHLLIKEG 1263
                  554588999.****************************..888887777777765 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.3
       PAS_9   61 erevevvlirkngetfwvlltaspv....kdddgelvgiivilrDi 102 
                   +  ev l+ k+ge+ w l++++ v    + +++    + + + Di
  KHJ34710.1 1354 SYCTEVRLRSKSGEYRWHLVRCVEVddikFGNGNSS--WFGACADI 1397
                  567899**************9998854422223333..33666666 PP

>> PAS  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.0    0.0001      0.23      20     113 .]    1087    1178 ..    1072    1178 .. 0.72
   2 !   11.0   0.0   0.00014      0.32       4      57 ..    1202    1255 ..    1199    1278 .. 0.88
   3 ?   -2.6   0.0       2.4   5.4e+03      58      98 ..    1334    1380 ..    1323    1382 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0001
                  TSBEEEECHHHHHHHSSTHHHCTTSBGGGGBSTTHHHHHHHHHHHHHHHTT-ECCCCEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEEES CS
         PAS   20 dgrilyvNaaaeellGlsreevlgkslldliheeddaelaelleqlleqgeesrageisfklrdgrpihlevraspvrdaggeilgflgvlrdi 113 
                   g+i++vN+ + +  G s e + + +   ++h+ d++  + + +++ + + e+ a++ ++++ dg+++++ +ras +rd  g + ++ g+ +di
  KHJ34710.1 1087 TGEIVWVNSRYLTYRGQSIESL-HINPWSSLHTSDRD-AYLKSWKHSLRTGEQFAMQARLRRFDGSYRWFYTRASGLRDSRGVVVQWHGTSMDI 1178
                  6778888888888888777654.55555578777765.4445555555555556666666666*****************99988888887776 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.00014
                  HHHHHHSSSEEEEEETTSBEEEECHHHHHHHSSTHHHCTTSBGGGGBSTTHHHH CS
         PAS    4 raileslpdpifvvDedgrilyvNaaaeellGlsreevlgkslldliheeddae 57  
                  r++ + +p  if   e   i+++N+ + +++G   ++ +g  ++d+ih++d a+
  KHJ34710.1 1202 RRLANLIPQIIFSATEEDGITFANHQWLSFTGQHFDDSIGLGFIDFIHPDDLAK 1255
                  677888999****************************************99654 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 2.4
                  HHHHHHHHHHHTT-ECCCCEEEEC......TTSSEEEEEEEEEEEEE CS
         PAS   58 laelleqlleqgeesrageisfkl......rdgrpihlevraspvrd 98  
                  +ael +      e+ ++g+ s ++      + g++++ +vr++ v d
  KHJ34710.1 1334 FAELARSGVVKIEKDNDGQLSYCTevrlrsKSGEYRWHLVRCVEVDD 1380
                  66666666666666667777777777777799999999999988866 PP

>> PAS_4  PAS fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   1.7e-08   3.7e-05       1     109 [.    1073    1182 ..    1073    1183 .. 0.93

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 1.7e-08
       PAS_4    1 ldslpdalavl.dpdgrvlyaNaaaaelfgappeellGktlaellpeedaarleralrrvlegeepiefleelll.pgeerhyelrllPlrdesGev 95  
                  ldslp  l++   p g ++++N ++  + g + e+l   ++ +l++  d++++   +++ l+++e   ++  l++ +g+ r++ +r++ lrd++G v
  KHJ34710.1 1073 LDSLPLHLFIAmPPTGEIVWVNSRYLTYRGQSIESLHINPWSSLHTS-DRDAYLKSWKHSLRTGEQFAMQARLRRfDGSYRWFYTRASGLRDSRGVV 1168
                  577777777777899************99999999999999998887.************************************************* PP

       PAS_4   96 igvlvisrDiTerr 109 
                  + + ++s Di e++
  KHJ34710.1 1169 VQWHGTSMDIHEQH 1182
                  **********9987 PP

>> PAS_8  PAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.24   5.4e+02       6      32 ..    1072    1099 ..    1067    1117 .. 0.87
   2 ?   10.0   0.0    0.0003      0.68       2      45 ..    1200    1242 ..    1199    1259 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.24
       PAS_8    6 lfesspdgiavvd..lgdrivdvNqaale 32  
                  l++s+p  ++++   +g+ iv+vN ++l 
  KHJ34710.1 1072 LLDSLPLHLFIAMppTGE-IVWVNSRYLT 1099
                  699999999999986677.*****99875 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.0003
       PAS_8    2 rlralfesspdgiavvd.lgdrivdvNqaalellGys.adlkgell 45  
                  ++r l + +p+ i+ +  +++ i+++N ++l ++G   +d++g  l
  KHJ34710.1 1200 KHRRLANLIPQIIFSATeEDG-ITFANHQWLSFTGQHfDDSIG--L 1242
                  79999*********7655889.*************55666666..3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       807  (0.0450109); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.09u 0.31s 00:00:01.40 Elapsed: 00:00:00.50
# Mc/sec: 12654.81
//
Query:       KHJ34711.1  [L=2348]
Description: putative hsp90-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.3e-30  103.8   0.0      2e-29  102.3   0.0    1.8  1  HATPase_c     Histidine kinase-, DNA gyrase B-, and HSP90-lik
    6.6e-21   74.6   0.3    4.8e-20   71.8   0.1    2.4  2  Response_reg  Response regulator receiver domain
    2.1e-19   69.3   0.1    1.8e-18   66.3   0.1    2.5  2  HisKA         His Kinase A (phospho-acceptor) domain
    3.4e-15   56.6   0.0    8.1e-15   55.3   0.0    1.6  1  GAF_2         GAF domain
      1e-14   55.3   0.2    4.1e-14   53.3   0.0    2.1  2  AAA_16        AAA ATPase domain
    6.9e-09   36.4   0.0    1.7e-08   35.1   0.0    1.7  1  GAF           GAF domain
    1.9e-06   27.4   0.0    5.8e-06   25.9   0.0    1.8  1  Pkinase       Protein kinase domain
    0.00028   21.2   0.0    0.00066   20.0   0.0    1.6  1  GAF_3         GAF domain
    0.00055   19.3   0.0     0.0029   16.9   0.0    2.0  2  Pkinase_Tyr   Protein tyrosine kinase
     0.0019   18.0   0.0     0.0049   16.7   0.0    1.7  1  HATPase_c_3   Histidine kinase-, DNA gyrase B-, and HSP90-lik
     0.0062   16.5   0.1      0.033   14.1   0.0    2.3  3  NACHT         NACHT domain
  ------ inclusion threshold ------
      0.062   13.5   0.1        4.4    7.8   0.0    3.7  3  TPR_8         Tetratricopeptide repeat
      0.079   13.2   0.0       0.23   11.6   0.0    1.8  1  DUF3369       Domain of unknown function (DUF3369)
        0.1   11.8   0.1       0.77    8.9   0.0    2.4  2  NB-ARC        NB-ARC domain


Domain annotation for each model (and alignments):
>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.3   0.0   1.6e-32     2e-29       1     110 [.    2040    2155 ..    2040    2158 .. 0.87

  Alignments for each domain:
  == domain 1  score: 102.3 bits;  conditional E-value: 1.6e-32
                  EHHHHHHHHHHHHHHHHHHHHSTTTEEEEEEEE.....EETEEEEEEEESSSSSTTHHHTGTCSTTCH.HCSTCHTSTSSSHHHHHHHHHHH.HTTT CS
   HATPase_c    1 gdekrLrqiisnlvdNavkfatkageieveika.....seddlvisveDnGiGipkedlkklfekfsq.ddstkrggggtGlGlsivkklve.lmgG 90  
                  gd+ rL+q++ nlv+N++kf t+ g+i v  ++     ++ +l++ v+D+GiGip+++l+klf++fsq d+st+r++gg+GlGlsi+k+lve +mgG
  KHJ34711.1 2040 GDPVRLHQVLGNLVSNSMKF-TEFGSIVVGARTdvetkDDLRLKFWVRDTGIGIPQQKLDKLFKPFSQaDASTARKYGGSGLGLSICKSLVEtMMGG 2135
                  799*****************.8888886655543332233577778**********************************************9**** PP

                  EEEEEEETTTEEEEEEEEES CS
   HATPase_c   91 eiwvesepgrGttftftlpl 110 
                  +i +es +g+Gtt +ft+ +
  KHJ34711.1 2136 KIGLESIEGQGTTCWFTITF 2155
                  *************8887654 PP

>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       1.1   1.5e+03      30      81 ..     727     777 ..     703     796 .. 0.67
   2 !   71.8   0.1   3.8e-23   4.8e-20       1     111 [.    2202    2321 ..    2202    2322 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1.1
                   SSHHHHHHHHHHHH.ESEEEEESSCSSSEHHHHHHHHHHCTTTSEEEEEESST CS
  Response_reg  30 edgkealellkeek.vdlillDinmpgmdGlellkeireedpelpviiltahs 81 
                   ++  ++l+ + ++k + l+l D++  + + l++l++i +    ++++i+ ++ 
    KHJ34711.1 727 NTCLDVLRVFVQHKfICLCLDDLQFADDESLDFLSQILASG--MKIVIIVTYR 777
                   5555666666555547788889***************9988..4444443333 PP

  == domain 2  score: 71.8 bits;  conditional E-value: 3.8e-23
                    EEEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHH....HHHH...ESEEEEESSCSSSEHHHHHHHHHHCT....TTSEEEEEESSTSHH CS
  Response_reg    1 vlivdDdplvrellrqlleeegyeevaeaedgkealell....keek...vdlillDinmpgmdGlellkeireed....pelpviiltahseee 84  
                    v+i++D+p++ ++  q++ + g+++v++ e+g ea+e l    k  +   ++++l+D++mp +dG+e++k ir+++    + + vi++ta + + 
    KHJ34711.1 2202 VCIAEDNPVNKKIAIQFMHKLGFRSVDAYENGLEAVEGLrlkaK--EgkpYHIVLMDVQMPVLDGYEATKLIRQDPidkiRRILVIAMTASAIQG 2294
                    79***********************************9966442..2557**************************97777799*********** PP

                    HHHHHHHCTESEEEESSG-HHHHHHHH CS
  Response_reg   85 davealkagaddflsKpfdpeeLlkal 111 
                    d++++l  g++d+l+Kp++ + L+++l
    KHJ34711.1 2295 DREKCLASGMNDYLAKPVRSNVLKDKL 2321
                    ********************9999876 PP

>> HisKA  His Kinase A (phospho-acceptor) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       1.1   1.4e+03      22      56 ..    1301    1333 ..    1297    1333 .. 0.84
   2 !   66.3   0.1   1.4e-21   1.8e-18       2      66 ..    1928    1991 ..    1927    1992 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1.1
                  HHHHH.HHC..T-HSSCHHHHHHHHHHHHHHHHHHH CS
       HisKA   22 gnaea.Lkregklteelkeyletiesearrldhlve 56  
                  g +e+ L++     ++l+e ++  ++ ++r+  +++
  KHJ34711.1 1301 GHLEVkLQD---SLPQLEESFDYSIQAGDRIATILN 1333
                  566666777...5799****************9987 PP

  == domain 2  score: 66.3 bits;  conditional E-value: 1.4e-21
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHC..T-HSSCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH CS
       HisKA    2 lgrflagvaHELrtPLsailgnaeaLkregklteelkeyletiesearrldhlvedlLdlsriea 66  
                  ++ fla+v+HELrtPL++++gn+e+L+++  lt +++e+ ++i+ +a+ l+ +++d+Ld+s+iea
  KHJ34711.1 1928 KSIFLANVSHELRTPLNGVIGNSELLRDS-CLTKDQAEMADSIRVSADLLLTVINDILDFSKIEA 1991
                  778*************************6.*********************************97 PP

>> GAF_2  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.3   0.0   6.3e-18   8.1e-15       4     135 ..    1723    1868 ..    1720    1870 .. 0.81

  Alignments for each domain:
  == domain 1  score: 55.3 bits;  conditional E-value: 6.3e-18
                  HHHHHHHHHHHHHH.S.S...EEEEEEE-TTS-EEEEEEEES-TTSTT-S-B.--......-TTHHHHHHHHTS-EEES-.GGG...-S-HHHHHHH CS
       GAF_2    4 leelldlvldelve.l.g.aalgyillvdddgglrlaawgeaeeefgaaldr.pl......geglvgealrtgrpvilnd.lee...dpdkkglpag 86  
                  +++ll+++++ ++    g a+ + i++++d  g  +aa+g +e++  a+++  pl      +eg++ +++r ++ v++ d +++   +  + +++a+
  KHJ34711.1 1723 IDQLLKTMCEIILHnCgGlATTAAIVVDEDSVGWSIAASGDPEKGAEAHIPGiPLgetaivAEGVILYCARFRETVFVPDlIRDerfSNVMEAWAAR 1819
                  799*********7746778889999997755556666888888888888877644777888999999*************77775665666666677 PP

                  HHTT--EEEEEE-T.TS---EEEEES......--HHHHHHHHHHHHHHHH CS
       GAF_2   87 haglrsflavPlis.egrvvGvlnlyankppafdeedlelLeelaeqiai 135 
                   ++ +s +a+P+++ ++ ++Gvl l   +p+af++++l+lL++l +qi+i
  KHJ34711.1 1820 NPHGKSVIAIPICHgNESLLGVLYL-EGEPNAFTDRNLTLLQLLVNQIGI 1868
                  7777777*******6677******9.89********************97 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.3   0.0   3.2e-17   4.1e-14      17     161 ..     557     766 ..     551     774 .. 0.86
   2 ?   -2.5   0.1       4.5   5.8e+03      67     121 ..    1887    1978 ..    1865    1998 .. 0.61

  Alignments for each domain:
  == domain 1  score: 53.3 bits;  conditional E-value: 3.2e-17
      AAA_16  17 ervrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleeala......... 106
                 +r r+g +e+v + G++G GK+ lv++++ +++++ g+f++ k+dq  + +++ +++++l   +l++q+ +e+++    ++++ l++ ++         
  KHJ34711.1 557 RRHRKGCCEIVTIAGAAGLGKTCLVQSIQIEARRR-GYFASSKFDQA-KRTAFGPVLKLL-S-SLFKQVFSESDT--ETPFHQILKRYVQpawpllhkv 649
                 68999999*********************777777.**********9.7789999*****.6.9********555..677777777777799******* PP

      AAA_16 107 ...........................................................avpelagaea............srllellkrllallsrde 134
                                                                            +        a             rll+++ + l+   + +
  KHJ34711.1 650 ldlpvfligntdvsmpnrinhsgfisqqnynknlrsdlrkrdtspssknticnmplvtqS--------AqdffragsstksLRLLNTCLDVLRVFVQ-H 739
                 *****************************9999999999999999888888555555441........35555556678889**********77777.7 PP

      AAA_16 135 rplvlvlDdlqwadeaslqllaaLlrl 161
                 + + l+lDdlq ad++sl++l+++l++
  KHJ34711.1 740 KFICLCLDDLQFADDESLDFLSQILAS 766
                 89******************9998875 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 4.5
      AAA_16   67 ipysalaqalareellrqlldeaesaeleawrekleeala..................................avpelagaea...srlle 121 
                   +++al +a+ +++l++++++++++ae+ +  e  eea++                                  +++e+a++++     ll 
  KHJ34711.1 1887 KAMVALQKAALKKSLIAEEKANQAKAEALRNVELAEEAVKaksiflanvshelrtplngvignsellrdscltkDQAEMADSIRvsaDLLLT 1978
                  55555445555667777777776666666666666666556666666666666666666666666666666655555555555555444444 PP

>> GAF  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   0.0   1.4e-11   1.7e-08       4     131 ..    1725    1868 ..    1722    1870 .. 0.66

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 1.4e-11
                  HHHHHHHHHHHHHHTESE..EEEEE.EEETTEEE......CEEEEECC.......EEEETTSHHHH.....HHHHHSSSEEESTGGTSTTHHTTHHH CS
         GAF    4 elldtvveelrellgadr..valyl.pdydGlhy......dipqasrw.......lfmkngrgicg.....qvlatgqplvipdstpdprfaqynrr 79  
                  +ll+t +e + + +g     +a+   +d+ G  +      d + +++              + i++     ++++ ++++ +pd+ +d+rf++  + 
  KHJ34711.1 1725 QLLKTMCEIILHNCGGLAttAAIVVdEDSVG--WsiaasgDPEKGAEAhipgiplG----ETAIVAegvilYCARFRETVFVPDLIRDERFSNVMEA 1815
                  5566666666655555332222222333444..12234544444444444322221....22233344555*************99*******9667 PP

                  HHHHHTTESEEEEEEEEETTE.EEEEEEEEESSSCSHHHHHHHHHHHHHHHHH CS
         GAF   80 dllenmgirsslvvPlvndge.lwGllvlhnpsppftreelellqvladqvav 131 
                    ++n++ +s++++P+ +++e l+G+l+l  + + ft+  l llq l +q+++
  KHJ34711.1 1816 WAARNPHGKSVIAIPICHGNEsLLGVLYLEGEPNAFTDRNLTLLQLLVNQIGI 1868
                  888999999********95555*********5446****************98 PP

>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   4.5e-09   5.8e-06     102     210 ..     193     315 ..     181     355 .. 0.76

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 4.5e-09
                 HHHHHHHHHHHHHH.HTTEE-SS-SGGGEEEE.TTTEEEE-SGTTSEESSSSCS.......BCTTTSCGG...GS-HHHHTTSCB..SHHHHHHHHHHH CS
     Pkinase 102 kiakqilegleylH.skgiiHrDlKpeNiLid.ekgelKitDFGlakelesssk.......ltsfvgtse...YlAPEvlkeney..skkvDvWslGvi 186
                 ++a    e le lH +++i H  +  + + ++ e++++Ki  FG   +  ++         l++++g ++   ++APE  ++ ++  ++ +D++slG++
  KHJ34711.1 193 DFAVGATECLEILHhREHIAHGEIRGDAFHMNtESRKVKILNFGSGLRTFEHGLtsngwsmLSKEIGAKTklcFMAPEQTGRMPTepDSRTDIYSLGIL 291
                 566677789999995667***********99988889*******98766555545899999666666543334*******554443599********** PP

                 HHHHHHSS-STTTSSHHHHHHHHH CS
     Pkinase 187 lyelltgkppfsgekgkekvekel 210
                 ++++l ++p f ge+  + +++ l
  KHJ34711.1 292 FWTILIQQPAFCGETPMDIIQAVL 315
                 ************777766444443 PP

>> GAF_3  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.0   5.2e-07   0.00066      75     126 ..    1818    1869 ..    1740    1872 .. 0.86

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 5.2e-07
       GAF_3   75 edglpdraalavPLvagr.qviGvlalastkprafdaedlelleslArqiata 126 
                  + + ++ +++a+P+++g+  ++Gvl+l+  +  af++++l ll+ l +qi+++
  KHJ34711.1 1818 ARNPHGKSVIAIPICHGNeSLLGVLYLEGEP-NAFTDRNLTLLQLLVNQIGIS 1869
                  346788999******************9955.78****************986 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   2.3e-06    0.0029      98     216 ..     184     312 ..      77     343 .. 0.78
   2 ?   -1.2   0.0      0.78     1e+03     164     201 ..    1182    1219 ..    1156    1225 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 2.3e-06
                  TTSBHHHHHHHHHHHHHHHHHHHHTT.EEEST-SGGGEEEE.ETTEEEE-STTTHEETTTSSEE.......EETTSSTSGGGGS-HHHHHHSE..EEH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskk.lvHrdlaarNvLls.enkvvkisDfGLardiekddey.......vkkeeaklpvkWmapEslkekk..fts 184
                  e+++l++ ++fa+   + +e L++++ + H +++     ++ e+++vki  fG   ++ ++  +       +k+ +ak+ + +mapE   ++     s
   KHJ34711.1 184 EPMELETFMDFAVGATECLEILHHREhIAHGEIRGDAFHMNtESRKVKILNFGSGLRTFEHGLTsngwsmlSKEIGAKTKLCFMAPEQTGRMPtePDS 281
                  678899999*************9876277******9986661577*******8543332222211233444888899***********9887633679 PP

                  HHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHH CS
  Pkinase_Tyr 185 ksDvWsfGvllwEiftlgespypglkneevle 216
                  ++D++s G+l w i+   +  + g +++++++
   KHJ34711.1 282 RTDIYSLGILFWTILI-QQPAFCGETPMDIIQ 312
                  99***********987.333444445555555 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.78
                   SSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTT CS
  Pkinase_Tyr  164 eaklpvkWmapEslkekkftsksDvWsfGvllwEiftl 201 
                   +  + +k m +E l ++  ++ sD  + G++l E ++ 
   KHJ34711.1 1182 KLIFKIKSMDIENLINRPESKDSDLSAVGIVLVETISA 1219
                   45578999999***********************9885 PP

>> HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   3.8e-06    0.0049       4      84 ..    2046    2127 ..    2043    2180 .. 0.72

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 3.8e-06
  HATPase_c_3    4 ekAlaelvdNsld.Adaenvkievnknrgkt....geivieDdGkGmseeelknalrlatsskeakrkstslGkkGiGlklAslsl 84  
                   +++l  lv Ns+   +  ++ + + ++ + +     ++ ++D G G+++++l++ +++ +++    ++++++G  G+G  l+++++
   KHJ34711.1 2046 HQVLGNLVSNSMKfTEFGSIVVGARTDVETKddlrLKFWVRDTGIGIPQQKLDKLFKPFSQADA--STARKYGGSGLG--LSICKS 2127
                   566777777777765666655555544322223448999******************9999999..69**********..555443 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   2.6e-05     0.033       2      33 ..     566     597 ..     565     655 .. 0.76
   2 ?   -2.3   0.0       2.8   3.6e+03     122     164 ..     771     828 ..     745     830 .. 0.63
   3 ?   -3.9   0.1         9   1.1e+04      69      95 ..    1691    1710 ..    1666    1734 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.6e-05
                 CEEEEC-TTTCHHHHHHHHHHHHCTS-SCCCC CS
       NACHT   2 lvilqGeaGsGKTtLlqklalawaegklpqga 33 
                 +v + G+aG GKT L+q++  +++++ +++  
  KHJ34711.1 566 IVTIAGAAGLGKTCLVQSIQIEARRRGYFASS 597
                 5889*******************999988753 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 2.8
                 EEEEEEECCCHHH.HCTTSSCE................EEEE--TCCHHHHHHHHCTT CS
       NACHT 122 sllltvrpralrd.leeqleea..............ivlevegfsesrrkqlvrkyfs 164
                  +++t rp+ +     ++++++              + + + +++e++++++v ++++
  KHJ34711.1 771 VIIVTYRPEESLSdKVKCIVDPsftkdnlngfgvgiTQINLLPLGEEDTRKYVAETLR 828
                 4555666655533222333333555556666677778889999999999999999876 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 9
                  S-CCHHHHCCSCCCEEEEEE-STT-SS CS
       NACHT   69 vsevwavllelperlLlilDglDelvt 95  
                   +       e++e+ Ll lD lD ++ 
  KHJ34711.1 1691 EQ-------EIAESGLLALDMLDLTSI 1710
                  44.......599999999999998764 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       2.7   3.5e+03       9      30 ..    1056    1077 ..    1049    1077 .. 0.77
   2 ?    7.8   0.0    0.0034       4.4       1      28 [.    1133    1160 ..    1133    1161 .. 0.92
   3 ?    0.3   0.0      0.85   1.1e+03       5      28 ..    1584    1607 ..    1582    1610 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 2.7
                  HHHHHTT-HHHHHHHHHHHHHH CS
       TPR_8    9 siylklgdyeeAkeyyekalel 30  
                  +   + g  + A+ +y+k+ +l
  KHJ34711.1 1056 QSATENGAPNTAVRFYQKCFSL 1077
                  55566777889********986 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0034
                  CCHHHHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8    1 aeayynlgsiylklgdyeeAkeyyekal 28  
                  a+a++++++iy ++gd  +A  +++ +l
  KHJ34711.1 1133 APAWVLKSRIYAQKGDSFSAFRALKACL 1160
                  79**************999999999987 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.85
                  HHHHHHHHHTT-HHHHHHHHHHHH CS
       TPR_8    5 ynlgsiylklgdyeeAkeyyekal 28  
                  y+l+   l  g   +Ake++++a+
  KHJ34711.1 1584 YLLAGFFLRSGSRRAAKEAMREAT 1607
                  788888999999*********996 PP

>> DUF3369  Domain of unknown function (DUF3369)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00018      0.23      96     166 ..    1806    1877 ..    1787    1879 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00018
     DUF3369   96 eelrelleraleskkslfeddfvvlyfktkegsegvlyle.ttrplseldrkLlevFannvavafeNvllne 166 
                  +e  +++ +a + ++   +    + +++ +e   gvlyle  +++ ++ + +Ll++++n+++++++N+l  +
  KHJ34711.1 1806 DERFSNVMEAWAARNPHGKSVIAIPICHGNESLLGVLYLEgEPNAFTDRNLTLLQLLVNQIGISYSNALTWK 1877
                  45555555566666555555677889999999********88999**********************98765 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.0    0.0006      0.77      19      43 ..     565     587 ..     556     635 .. 0.88
   2 ?   -1.2   0.0      0.73   9.3e+02      95     150 ..     731     789 ..     698     798 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0006
                 CSEEEEEEESTTSSHHHHHHHHCCS CS
      NB-ARC  19 qslvvalvGmgGvGKttlakqilnk 43 
                 +  +v++ G +G+GKt l+++i  +
  KHJ34711.1 565 E--IVTIAGAAGLGKTCLVQSIQIE 587
                 4..9****************99766 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.73
                 HHHHHCCCTTEE.EEEEEE-..SHHHH.....HHHHCHTTSEEEEEES.BCCCCCCS-S- CS
      NB-ARC  95 klvrlLltkrfl.lvlDDVw..eeedwdkigvvlparenrlrvllTTR.deevanavsat 150
                 ++ r+  +++f+ l lDD    + e +d +++ l     ++ +++T R +e+++++v++ 
  KHJ34711.1 731 DVLRVFVQHKFIcLCLDDLQfaDDESLDFLSQILA-SGMKIVIIVTYRpEESLSDKVKCI 789
                 4556666666653779**86225556999999998.8999999***99445677777775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       580  (0.0323498); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              14  [number of targets reported over threshold]
# CPU time: 1.16u 0.30s 00:00:01.46 Elapsed: 00:00:00.49
# Mc/sec: 14529.82
//
Query:       KHJ34712.1  [L=541]
Description: putative sugar transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-78  265.2  16.0    1.2e-78  265.0  16.0    1.0  1  Sugar_tr    Sugar (and other) transporter
    9.7e-20   70.8  15.3    9.7e-20   70.8  15.3    2.1  2  MFS_1       Major Facilitator Superfamily
     0.0011   18.4   0.2     0.0011   18.4   0.2    2.1  2  MFS_4       Uncharacterised MFS-type transporter YbfB
     0.0091   14.9   2.6     0.0091   14.9   2.6    2.3  2  MFS_1_like  MFS_1 like family


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  265.0  16.0   2.6e-82   1.2e-78       4     451 ..      63     515 ..      60     516 .. 0.90

  Alignments for each domain:
  == domain 1  score: 265.0 bits;  conditional E-value: 2.6e-82
                 HHHHHH.HHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS CS
    Sugar_tr   4 vaalgg.llfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgkns 101
                 va+ +g +++gYd  +++ f+++++f k++g    ++++e  ++++  + +  l+G+iiG  +  ++++rfG++k+l+ +    +  + + +++k   +
  KHJ34712.1  63 VAISTGiIMEGYDNLLLAQFYAMPSFCKKYGSMGPNGKYEIPAKWQAGLSNGCLAGEIIGLHLNAYAIERFGYRKTLIYSLGAIICFINILFFSK---N 158
                 7888888******************************9999999999999999**************************9999999999999999...9 PP

                 -TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHH.HTSS-TTHHHHHHHCCHHHHHHHHHHGGGS---HHHHH CS
    Sugar_tr 102 vevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglgl.nktsnadgwrillglqlvpallllilllflPESPrylv 199
                 + +l++g +l+Gi+ G++++l+  y+s ++p klR +l+++++l++++G+l+++++   l ++t++ + +ri+++lq+++++ ++++++f PESP++lv
  KHJ34712.1 159 IVMLLIGEILCGIPFGVFQTLTCAYASDVCPVKLRPFLTTYTNLCWVIGQLIGSGVLRCLvERTDQ-WSYRIPFALQWFWPIPIALAIFFSPESPWWLV 256
                 ********************************************************9999677777.******************************** PP

                 HTT-HHHHHHHHHHHHHC........HHHHHHHHHHHHHHHHHHH........HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-T CS
    Sugar_tr 200 ekgkeeeakevlaklrge........edadrelaeekdsleaeqeee...kaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlgls 287
                  +g+ eea+++lakl +          d++ ++    + +e++   +     + ++++ +  + +r+ i + ++++q+l+G  a+m ys++++ ++gl 
  KHJ34712.1 257 RHGRNEEARKSLAKLTDPkgappefnIDDTLDMIILTNNIEKA---QtqgAGYRDCFKHT--NARRTEISCITWVIQNLCG-SAFMGYSTYFYVQAGLP 349
                 **************88886745542223333333333333444...14525555555555..68*****************.9**************** PP

                 HH..HHHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTH CS
    Sugar_tr 288 ks..llvtiivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilgivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvR 384
                 +   +++t+i + + f+ t+ +++l+ +fGRRtl+  G+++ +i ++ +g va ++ +k  + + v+  +++l++ ++ +++gp+ + lvsE+ +++++
  KHJ34712.1 350 TVmaFTMTLIQYGIGFIGTVSSWYLMGQFGRRTLFGCGLFFLFIILLGIG-VAGIIDNK--VTGWVIGSLLVLYTLIYDCTVGPITYSLVSEIPSTRLK 445
                 *************************************************9.66666666..89999999****************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHCHHH...T-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGG CS
    Sugar_tr 385 skalaiavavnwlanflisllfpiiteaig...ggyvflvfaglavlfiifvfffvpetkgrtleeieel 451
                 +k+  +a ++ +la ++  ++ p++++       g++++++ag++ l +++++f +pe  +r+  +++ l
  KHJ34712.1 446 NKTVVLARNLFNLAGIINYVIVPFMLNPTAwnwSGKSGFFWAGVCSLCLTWTYFRLPEPRNRSYADLDDL 515
                 **************************98888889************************999998777665 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.8  15.3   2.2e-23   9.7e-20      42     351 ..     116     462 ..      59     463 .. 0.81
   2 !    4.5   0.2    0.0031        14     129     193 ..     455     521 ..     445     535 .. 0.74

  Alignments for each domain:
  == domain 1  score: 70.8 bits;  conditional E-value: 2.2e-23
       MFS_1  42 algaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpll 140
                  +g +++  + ++ ++rfG r++l+ +l + + ++ +l+f+ ++ +ll++ +l+G+  g++ ++  a+++d+ p + r++ + + ++++ +G ++g ++
  KHJ34712.1 116 LAGEIIGLHLNAYAIERFGYRKTLIYSLGAIICFINILFFSKNIVMLLIGEILCGIPFGVFQTLTCAYASDVCPVKLRPFLTTYTNLCWVIGQLIGSGV 214
                 56677778888999**************99999988888978888****************************************************** PP

       MFS_1 141 ggllasslg...Wravfyilaivsllafvlfllllpeepperkrkspkeee....................................kgtgpaplvpaw 200
                    l++      +r +f +  +  +  ++   + ++ ++++ + +++ + e                                    ++t++a+ ++ +
  KHJ34712.1 215 LRCLVERTDqwsYRIPFALQWFWPIPIAL---AIFFSPESPWWLVRHGRNEearkslakltdpkgappefniddtldmiiltnniekAQTQGAGYRDCF 310
                 ****9887744466666666666666555...6666666666666666666667777777788889999988888999988888777666666666655 PP

       MFS_1 201 kallkdpvlw..illialllfffgfsglltllplylqevlglsglllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavt 297
                 k+  +++     ++++ ++ + ++ s+++ +++ +   + gl+  ++a ++  + + +g+i+ + + +l+  +grr+    +l++l++++lg+ +++ +
  KHJ34712.1 311 KHTNARR--TeiSCITWVIQN-LCGSAFMGYSTYF-YVQAGLP-TVMAFTMTLIQYGIGFIGTVSSWYLMGQFGRRTLFGCGLFFLFIILLGIGVAGII 404
                 5555555..132344444444.4666677776666.9******.79999999999999999998888888*****999999999*************** PP

       MFS_1 298 ssavllll...vlvliGfglgfv.fpsllalasdlappeeagtasglfntagslggal 351
                 +++v +++   +lvl+++ + ++  p+  +l+s+  +++   + + l+  +++l+g++
  KHJ34712.1 405 DNKVTGWVigsLLVLYTLIYDCTvGPITYSLVSEIPSTRLKNKTVVLARNLFNLAGII 462
                 ********9999999***7777736666666666667777777777777888888775 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0031
       MFS_1 129 gfslGailgpllggllasslgWrav...fyilaivsllafvlfllllpeepperkrkspkeee.kgtgp 193
                  f+l+ i+ +++ ++++    W ++    ++ a+v+ l+  l + +++ ++p+++  ++ +++ +++ p
  KHJ34712.1 455 LFNLAGIINYVIVPFMLNPTAWNWSgksGFFWAGVCSLC--LTWTYFRLPEPRNRSYADLDDLfERKIP 521
                 6899999999*******9999999977766666666666..6779999999999888877775544444 PP

>> MFS_4  Uncharacterised MFS-type transporter YbfB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.2   2.3e-07    0.0011     240     345 ..     120     226 ..     109     232 .. 0.84
   2 ?   -1.5   0.9      0.26   1.1e+03     288     310 ..     385     407 ..     311     464 .. 0.56

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 2.3e-07
       MFS_4 240 ivgvlvwlrvakrsglrralaaallieavgvllsllspsplglivssvllGltflaitalvlqlarelappatrrllglmT.asfgigQilGpllasll 337
                 i+g+ +   + +r g r+ l   l    + + +   s+ +++l+++ +l+G +f +   l+ ++a  + p + r  l   T +++ igQ++G  +   l
  KHJ34712.1 120 IIGLHLNAYAIERFGYRKTLIYSLGAIICFINILFFSKNIVMLLIGEILCGIPFGVFQTLTCAYASDVCPVKLRPFLTTYTnLCWVIGQLIGSGVLRCL 218
                 66777777777888888887777777666777778899**********************************988888777589*********999999 PP

       MFS_4 338 aeatgsla 345
                  e+t + +
  KHJ34712.1 219 VERTDQWS 226
                 99987765 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.26
       MFS_4 288 llGltflaitalvlqlarelapp 310
                 ++Gl+fl i+ l++ +a  +  +
  KHJ34712.1 385 GCGLFFLFIILLGIGVAGIIDNK 407
                 34444444444444444444444 PP

>> MFS_1_like  MFS_1 like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   2.6     2e-06    0.0091     272     367 ..     118     212 ..     112     218 .. 0.90
   2 ?    0.4   1.8     0.053   2.4e+02     237     310 ..     328     401 ..     277     470 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2e-06
  MFS_1_like 272 aeiplfffaeklleklGhvklliiallayilrfllyaiienawlvlpievLhgisfgllwaaaveyvskiapksleatgqgllsglyfglGralGs 367
                 +ei+ + ++ + +e++G +k li +l a+i    ++ + +n +++l+ e+L gi fg++      y+s++ p +l+ ++   ++ l++ +G+ +Gs
  KHJ34712.1 118 GEIIGLHLNAYAIERFGYRKTLIYSLGAIICFINILFFSKNIVMLLIGEILCGIPFGVFQTLTCAYASDVCPVKLRPFLT-TYTNLCWVIGQLIGS 212
                 688889999999***************998877777777*************************************9976.589999999999998 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.053
  MFS_1_like 237 lgmswgiienFlflYLkelgasntllGslvalgvvaeiplfffaeklleklGhvklliiallayilrfllyaii 310
                    + +++  + + ++ + g ++ ++ +++ ++     +  + + +l+ ++G ++l   +l++ ++ +l++++ 
  KHJ34712.1 328 QNLCGSAFMGYSTYFYVQAGLPTVMAFTMTLIQYGIGFIGTVSSWYLMGQFGRRTLFGCGLFFLFIILLGIGVA 401
                 44444555555555555666555555444444444444444555555666666666666665555555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (541 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       488  (0.0272185); expected 358.6 (0.02)
Passed bias filter:                      282  (0.0157287); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3661.01
//
Query:       KHJ34713.1  [L=410]
Description: putative duf250 domain membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-24   86.1  21.4    3.4e-24   85.7  21.4    1.1  1  TPT       Triose-phosphate Transporter family
  ------ inclusion threshold ------
      0.093   12.9  39.4      0.075   13.2  15.8    2.6  3  EamA      EamA-like transporter family


Domain annotation for each model (and alignments):
>> TPT  Triose-phosphate Transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.7  21.4   3.7e-28   3.4e-24       4     289 ..      43     330 ..      40     331 .. 0.84

  Alignments for each domain:
  == domain 1  score: 85.7 bits;  conditional E-value: 3.7e-28
         TPT   4 gllfllWYllnvvfnilnKkilnvf..pyPltvsavqllvgsvlilvlwal.gl...kkrpkisse.flkailplalvktlghvlavvslskvaVSfth 95 
                 ++++++W  l++++ ++nK il+ +  +yP++++a +l+  ++++ +l ++ +l   +k  k++ + +l+ai+p++++  l+ + ++++    +VSf +
  KHJ34713.1  43 AIYVIVWISLSSSVILFNKWILSSLqfHYPILLTAWHLIFATIMTQLLARTtRLldgRKSVKMTGRiYLRAIVPIGIFFSLSLICGNLTYLYLSVSFIQ 141
                 6899*******************87669****************99887765442115566777779******************************** PP

         TPT  96 tvKasePiFtvilsrlllgeklsllvylsLlpivgGvalasvtElsFnligfisAlisnltfslrnifsKkllkk..lkdldalnlfaiitilslllll 192
                 ++Ka  P+   +    l  + + ++++  +  iv Gv+las+ E++F +igf+      +++++r  +  +ll++   k +d l  + + + + +++ l
  KHJ34713.1 142 MLKAFTPVAVLVAGWALGLDPVDFKKLGNVSFIVIGVVLASFGEIDFVMIGFLFQAGGIMFEAVRICLVQRLLNGaeFK-MDPLVSLYYFAPVCAAMNL 239
                 ********87777777777889999999**********************************************93222.5554444444555555555 PP

         TPT 193 Pvallvegvlktpsllkstkvslkev.llllllsgvlfhlynqvaymvLervspvthsvantvKrvvvIvlsvlvfknpvsllnaiGtavaivGvflY 289
                  val+ e     p++  s+   +++v l + ++++ + +l n+    ++ ++s +  ++  ++K ++ +++s+++ ++++s+l+a+G ++a+ G + Y
  KHJ34713.1 240 IVALFWEV----PKISISE---IYAVgLSTFFANACCAFLLNVSVVFLIGKTSGLILTLCGVLKDILLVAASMIIWGTQISSLQAFGYTIALGGMIYY 330
                 55555555....3333333...334415667889999*********************************************************9998 PP

>> EamA  EamA-like transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2  15.8   8.3e-06     0.075       5     136 ..      44     182 ..      40     183 .. 0.78
   2 ?    8.0  12.6   0.00035       3.1      28     134 ..     221     329 ..     190     331 .. 0.77
   3 ?   -2.7   0.0      0.68   6.1e+03      43      48 ..     367     372 ..     356     391 .. 0.56

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 8.3e-06
        EamA   5 llallaalfwaiyfvlskillrkv...spltltfvrfliagillliiallkegklaklslkdwllllllgllgtvlafllffyalk....ktsasnasl 96 
                 +++++   ++++ +++ k++l+++    p+ lt++ +++a+i+  ++a  ++  + + s+k    + l +++++ ++f+l ++  +    ++s+s++ +
  KHJ34713.1  44 IYVIVWISLSSSVILFNKWILSSLqfhYPILLTAWHLIFATIMTQLLARTTRLLDGRKSVKMTGRIYLRAIVPIGIFFSLSLICGNltylYLSVSFIQM 142
                 5666666778888889999966665559***************97776555555555667777777777777777777666554331122789****** PP

        EamA  97 itslePvftlilsvlllgekltlkqllgivlillGvllil 136
                 + +++Pv +l+ +++l   ++ +k+l  + +i++Gv+l +
  KHJ34713.1 143 LKAFTPVAVLVAGWALGLDPVDFKKLGNVSFIVIGVVLAS 182
                 *************************************986 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00035
        EamA  28 vspltltfvrfliagillliiallkegklaklslkdwllllllgllgtvlafllff....yalkktsasnaslitslePvftlilsvlllgekltlkql 122
                 ++pl  + +   +++++ li+al++e ++  +s +++ ++ l  +++++++ +l++     ++ kts  + +l+  l  ++ +  s++++g +++++q 
  KHJ34713.1 221 MDPLVSLYYFAPVCAAMNLIVALFWEVPK--ISISEIYAVGLSTFFANACCAFLLNvsvvFLIGKTSGLILTLCGVLKDILLVAASMIIWGTQISSLQA 317
                 4666666666669****************..99999888888888777766655541111567777888888888899999****************** PP

        EamA 123 lgivlillGvll 134
                 +g  ++l G ++
  KHJ34713.1 318 FGYTIALGGMIY 329
                 ********9875 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 0.68
        EamA  43 illlii 48 
                 ++l i+
  KHJ34713.1 367 FILTIF 372
                 111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (410 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       763  (0.0425568); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 3108.62
//
Query:       KHJ34714.1  [L=829]
Description: putative dil domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-31  108.2   1.0    2.2e-31  108.2   1.0    1.8  2  DIL       DIL domain
      4e-13   49.8   0.5    2.1e-12   47.4   0.1    2.4  2  Ank_2     Ankyrin repeats (3 copies)
      5e-10   39.4   0.0    1.6e-05   25.1   0.0    2.8  2  Ank_5     Ankyrin repeats (many copies)
    6.7e-09   36.1   0.1     0.0077   16.8   0.0    3.6  3  Ank_4     Ankyrin repeats (many copies)
    4.7e-07   30.0   0.2       0.15   12.6   0.0    4.0  4  Ank       Ankyrin repeat
    1.3e-06   28.2   0.9      0.055   14.0   0.0    4.4  4  Ank_3     Ankyrin repeat
  ------ inclusion threshold ------
      0.045   13.1   0.6       0.11   11.9   0.6    1.6  1  Kdo       Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> DIL  DIL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.2   1.0   8.4e-35   2.2e-31       1     103 [.     555     677 ..     555     678 .. 0.91
   2 ?   -3.1   0.1       3.8   9.7e+03      41      72 ..     696     723 ..     688     734 .. 0.63

  Alignments for each domain:
  == domain 1  score: 108.2 bits;  conditional E-value: 8.4e-35
                 HHHHHHHHHHHHHHHHHHHHHS-SB-HHHHHHHHHHHHHHHHCCTS-......................-GGGGHHHHHHHHHHHC-S-.-HHHHHHH. CS
         DIL   1 QlfsqlfyfinaelfNrlllrkklcsrskGlqlrrnlslledWaeeqgl..e...............eaaekhlapliqaaqllqlpks.sledlesi. 80 
                 Q+++ql+y+++aelfNr+++++k++ rsk++q+r+nls++e+Wa+ ++   e               +aa++hlap+iq++q+lq+ +s +++dl+++ 
  KHJ34714.1 555 QILAQLLYWLGAELFNRIMSNRKYMARSKAMQIRMNLSMIEEWARANNRlpEhyedgsmtstgestiDAARNHLAPVIQLLQWLQCFSSlEQNDLDALt 653
                 99*******************************************98875538999*********************************9556666434 PP

                 ..C.TT-TSS-HHHHHHHHTTB--T CS
         DIL  81 ..lrstcpaLnsaQlkrllenYrpe 103
                   + +++++L+++ l +++++Yrpe
  KHJ34714.1 654 gtV-QQLTRLSPQHLIHVVKHYRPE 677
                 426.*******************98 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 3.8
                 HHCCTS-.....-GGGGHHHHHHHHHHHC-S- CS
         DIL  41 edWaeeqgleeaaekhlapliqaaqllqlpks 72 
                 ++W e++    + +k+l++ ++++q+ +++++
  KHJ34714.1 696 KQWQERK----DRQKNLRRASSVSQIATSKTA 723
                 4566663....446677777777777666665 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.4   0.1   8.2e-16   2.1e-12       1      82 [.     147     242 ..     147     243 .. 0.86
   2 ?   -1.4   0.0       1.4   3.7e+03       5      32 ..     392     424 ..     377     442 .. 0.50

  Alignments for each domain:
  == domain 1  score: 47.4 bits;  conditional E-value: 8.2e-16
       Ank_2   1 LhlAakngnlelvklLleg.....adpn..k.ngktaLhyAakngnleivklLleh......adndgrtpLhyAarsghleivklLlekgadinlk 82 
                 L +Aa+ng+ + ++ +l+g     +d+n  + +g t+++yA   g++ +v +Ll++      +d++ +++L++A  + h +++k Ll++ga+++++
  KHJ34714.1 147 LNMAASNGDIDRIQCILNGkakeyVDINapDeEGTTPIIYASCFGHEAVVNALLDAgakadsQDQNQWSALMWAMINRHKRVAKALLDRGASVEVR 242
                 568999**999999999665666777777537**************999*****966676666699*************************99875 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 1.4
       Ank_2   5 akngnlelvklLl.egadpn....k..ngktaLhy 32 
                 a+++   l klL+ +  ++n    +  +++t+L +
  KHJ34714.1 392 ANQD--LLAKLLItSLEKINdvveShqWDMTILAF 424
                 2222..14445555333333332213355555554 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   0.00013      0.35      18      56 .]     145     187 ..     130     188 .. 0.91
   2 !   25.1   0.0   6.1e-09   1.6e-05       1      55 [.     199     252 ..     199     253 .. 0.97

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00013
       Ank_5  18 tpLhvAakygaadvvrlLl....argadlnltdsrGltaldlA 56 
                   L++Aa++g  d ++ +l    ++ +d+n+ d++G t++ +A
  KHJ34714.1 145 KSLNMAASNGDIDRIQCILngkaKEYVDINAPDEEGTTPIIYA 187
                 679999999999999999999999***************9998 PP

  == domain 2  score: 25.1 bits;  conditional E-value: 6.1e-09
       Ank_5   1 Llehg.padvnrldgggntpLhvAakygaadvvrlLlargadlnltdsrGltaldl 55 
                 Ll++g  ad ++++++  ++L++A  +++ +v++ Ll+rga+  ++ ++G+tald+
  KHJ34714.1 199 LLDAGaKADSQDQNQW--SALMWAMINRHKRVAKALLDRGASVEVRSASGRTALDF 252
                 89***999999*9999..*************************************7 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   1.1e-05     0.029       7      55 .]     149     200 ..     145     200 .. 0.78
   2 !   16.8   0.0     3e-06    0.0077       2      41 ..     214     252 ..     213     252 .. 0.95
   3 ?   -2.2   0.0       2.8   7.2e+03       7      25 ..     387     405 ..     385     424 .. 0.67

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.1e-05
       Ank_4   7 yaaisgrlelvrlLl...ekg..adinaqdnrsGetalhiAakrgnveilklLl 55 
                 +aa+ g+++ ++ +l   + +  +dina  +++G t++++A  +g+  ++  Ll
  KHJ34714.1 149 MAASNGDIDRIQCILngkA-KeyVDINAP-DEEGTTPIIYASCFGHEAVVNALL 200
                 6777777777777773221.24578***8.******************999887 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 3e-06
       Ank_4   2 ltaLhyaaisgrlelvrlLlekgadinaqdnrsGetalhi 41 
                 ++aL +a+i  + ++++ Ll++ga++  + ++sG+tal++
  KHJ34714.1 214 WSALMWAMINRHKRVAKALLDRGASVEVR-SASGRTALDF 252
                 689**************************.********86 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2.8
       Ank_4   7 yaaisgrlelvrlLlekga 25 
                 ya ++ + +l++ Ll +  
  KHJ34714.1 387 YAHYHANQDLLAKLLITSL 405
                 7888888888776653433 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.53   1.4e+03       8      31 ..     149     177 ..     147     178 .. 0.76
   2 !   11.8   0.0    0.0001      0.26       2      31 ..     180     210 ..     179     211 .. 0.86
   3 !   12.6   0.0   5.8e-05      0.15       3      28 ..     214     240 ..     212     244 .. 0.84
   4 ?   -2.2   0.0       2.8   7.2e+03       9      22 ..     623     644 ..     619     653 .. 0.61

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.53
                 HHHHHTTHHHHHHHHTT.....TSTTCBT CS
         Ank   8 lAatngkkriiklLLhG.....Anlnald 31 
                 +Aa+ng+ + i+ +L+G      ++na d
  KHJ34714.1 149 MAASNGDIDRIQCILNGkakeyVDINAPD 177
                 477799999***99988744555788877 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.0001
                 SBBHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank   2 GnTPLHlAatngkkriiklLL.hGAnlnald 31 
                 G TP  +A+++g++ ++ +LL  GA  +++d
  KHJ34714.1 180 GTTPIIYASCFGHEAVVNALLdAGAKADSQD 210
                 89*******************6698666665 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 5.8e-05
                 BBHHHHHHHHTTHHHHHHHH.TTTSTT CS
         Ank   3 nTPLHlAatngkkriiklLL.hGAnln 28 
                 +++L++A  n +kr++k+LL +GA++ 
  KHJ34714.1 214 WSALMWAMINRHKRVAKALLdRGASVE 240
                 79****987888********779*986 PP

  == domain 4  score: -2.2 bits;  conditional E-value: 2.8
                 HHHHTTHHHHHHH........H CS
         Ank   9 AatngkkriiklL........L 22 
                 Aa+n  + +i+lL        L
  KHJ34714.1 623 AARNHLAPVIQLLqwlqcfssL 644
                 5655558899988664444444 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.4   0.0    0.0064        16       4      24 ..     145     168 ..     143     175 .. 0.79
   2 ?    2.8   0.0     0.094   2.4e+02       4      28 ..     182     205 ..     179     208 .. 0.87
   3 !   14.0   0.0   2.1e-05     0.055       1      29 [.     212     239 ..     212     241 .. 0.93
   4 ?   -2.0   0.2       3.6   9.2e+03       5      22 ..     380     397 ..     378     405 .. 0.65

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0064
       Ank_3   4 tpLhlAarsgnleivkfLle...n 24 
                   L +Aa++g++++++ +l+   +
  KHJ34714.1 145 KSLNMAASNGDIDRIQCILNgkaK 168
                 5799***************94443 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.094
       Ank_3   4 tpLhlAarsgnleivkfLlenkgad 28 
                 tp+ +A  +g+ ++v +Ll+  ga 
  KHJ34714.1 182 TPIIYASCFGHEAVVNALLD-AGAK 205
                 9999****************.7876 PP

  == domain 3  score: 14.0 bits;  conditional E-value: 2.1e-05
       Ank_3   1 nGetpLhlAarsgnleivkfLlenkgadv 29 
                 n++++L++A+ + +  ++k+Ll+ +ga v
  KHJ34714.1 212 NQWSALMWAMINRHKRVAKALLD-RGASV 239
                 689********************.9*987 PP

  == domain 4  score: -2.0 bits;  conditional E-value: 3.6
       Ank_3   5 pLhlAarsgnleivkfLl 22 
                 +L+l ar++++   + Ll
  KHJ34714.1 380 ILFLSARYAHYHANQDLL 397
                 789999999995433333 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.6   4.1e-05      0.11      41     187 ..     569     712 ..     554     731 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.1e-05
         Kdo  41 lgklskdl.yrfklgrtravrEfrllkrLeeagvavpkpvaagavkvgleyrAlllterlegaqdLedllakwaelaeelkrallkavgrliaklhrag 138
                 +++++ ++ y+++ ++ +++  ++++++  +a  + p+    g + + +e + +    +l++++ L ++l+       +l+++ l a+  ++++l r+ 
  KHJ34714.1 569 FNRIMSNRkYMARSKAMQIRMNLSMIEEWARANNRLPEHYEDGSMTSTGESTIDAARNHLAPVIQLLQWLQC----FSSLEQNDLDALTGTVQQLTRLS 663
                 55555543266667777888888888888888888888888888888888888888899************6....899******************** PP

         Kdo 139 vnHadlyaknillqqeeeeeaeiwliDldkarlrlradrwrekdLarLk 187
                  +H    +k+   + +e++  +  +  l+k +++++++++r+k+L+r  
  KHJ34714.1 664 PQHLIHVVKHYRPEVGEKGLPKTGIKYLNKLQKQWQERKDRQKNLRRAS 712
                 ***********99999999999***********************9955 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (829 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1039  (0.0579508); expected 358.6 (0.02)
Passed bias filter:                      662  (0.0369234); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.76u 0.28s 00:00:01.04 Elapsed: 00:00:00.46
# Mc/sec: 5372.94
//
Query:       KHJ34715.1  [L=764]
Description: putative tbc domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-35  123.4   0.1      2e-35  122.4   0.1    1.4  1  RabGAP-TBC  Rab-GTPase-TBC domain


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.4   0.1   1.1e-39     2e-35       2     195 ..     501     691 ..     500     699 .. 0.85

  Alignments for each domain:
  == domain 1  score: 122.4 bits;  conditional E-value: 1.1e-39
  RabGAP-TBC   2 elRgevWklllgyepevkrlkksekkqeksekeksklekseeskelsqIkkDvprtfp.es.esfknkqgqnqLeriLkaysiynpevgYcqGmndiva 98 
                 + R+ +W  +l+++  +k+    ++  e +  ++ +   +e+s +  qI+ Dvprt++ +  ++++++ gq+ L+r+L+++s+y+p +gY+qGm  ++a
  KHJ34715.1 501 RWRAAAWYSFLRASA-KKQI---NSTTESEIINSFYVLLDESSADDIQIDIDVPRTINsHImFRKRYRGGQRLLFRVLHCLSLYFPRTGYVQGMASLAA 595
                 78999******9963.3333...344444444444555555566789***********555999999******************************** PP

  RabGAP-TBC  99 plllvsldeeeaFwcfvsLlekyklrdlytsslpglkrklkvleellkkkdpklykhlkeegldlelfaikwfltlflrefpletvlrlwD.lllege 195
                 +ll  + dee+aF ++v+L +  ++ +ly ++++gl ++l+ ++    +   +++k+l++++++++ + ++w+ltlf  ++p++  lr+wD ++l g+
  KHJ34715.1 596 TLL-CYYDEENAFVMLVRLWTIRGMDKLYDPGFQGLMAALREFQTKW-IDNRAVSKKLEDLSIEPTAYGTRWYLTLFNFSIPFSAQLRVWDvFMLLGD 691
                 ***.7779999*************************99999998776.556679999**********************************7777554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (764 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 5401.64
//
Query:       KHJ34716.1  [L=317]
Description: putative cysteine proteinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      4e-23   82.3   0.0      4e-23   82.3   0.0    2.2  3  OTU            OTU-like cysteine protease
     0.0057   16.1   2.3       0.54    9.7   0.0    3.1  3  Peptidase_C65  Peptidase C65 Otubain
  ------ inclusion threshold ------
       0.12   12.5   1.2       0.69   10.0   1.2    2.3  1  YqzH           YqzH-like protein


Domain annotation for each model (and alignments):
>> OTU  OTU-like cysteine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.9      0.41   2.4e+03      29      55 ..      21      54 ..       4     103 .. 0.57
   2 ?   -2.4   0.0       1.1   6.5e+03      43      53 ..     126     136 ..      90     158 .. 0.52
   3 !   82.3   0.0   6.7e-27     4e-23       1     127 []     168     297 ..     168     297 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.41
                HHHHCHHHHHH.......TSSHHCCHHHHCCHHH CS
         OTU 29 eLreklaeylr.......ehseelelfleeeeeg 55
                ++ +k +++ +        ++eelel+l e+++ 
  KHJ34716.1 21 KITQKKKSATKksrrgvvTECEELELQLRERQKY 54
                3333333333344445557777777777777332 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.1
                 HHCCHHHHCCH CS
         OTU  43 eelelfleeee 53 
                  e e+ +ee  
  KHJ34716.1 126 AEKEVAIEEAR 136
                 22222222222 PP

  == domain 3  score: 82.3 bits;  conditional E-value: 6.7e-27
                 --SS-HHHHHHHHCCCSS.S.........HCCHHHHHHHHHCHHHHHHTSSHHCCHHHHCCHHHHHHHTTSTTHHHHHHHHHHHHHHCTS-EEEETTSS CS
         OTU   1 rgDGnCLlravsqqlwgvsd.........elrkakvseLreklaeylrehseelelfleeeeegylkeiektaawggeleifalahiLrrpIiVlkses 90 
                 r+DG+CL+ av++ql  + +           ++++++ +re  a y+ eh ++++  l+e  ++y+++i++ta+wgg+le+ ala + +++I ++++  
  KHJ34716.1 168 RPDGHCLFSAVADQLT-HIGiplsteeksFSEDQQYKIVRESAAAYIDEHTDDFAAWLDEPLAQYVEKIRNTAEWGGHLELLALARCYKVKICIIQNGT 265
                 69*************7.444688666666444556779********************************************************99999 PP

                 SSEEEE-TT-EEE--TTS-GGGS-SS-EEEEEETTEE CS
         OTU  91 geelvglkfegvylplekdkslclkypihlyylgeHy 127
                 ++++ +l ++    + ++ ++++l+y++h ++lgeHy
  KHJ34716.1 266 PQTIEPL-IN----QAKDTPKIWLAYYRHGFGLGEHY 297
                 9988773.33....3699******************9 PP

>> Peptidase_C65  Peptidase C65 Otubain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.3      0.18   1.1e+03      72     141 ..      14      78 ..       2      88 .. 0.50
   2 !    4.7   0.1    0.0029        17      44      57 ..     166     179 ..     125     185 .. 0.79
   3 !    9.7   0.0   9.1e-05      0.54     143     201 ..     206     261 ..     190     290 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.18
                    HHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHTTSS-HH....HHHHHHTSHHHHHHHHHH CS
  Peptidase_C65  72 evsrikerveklkealeslgfdeevvedfleaflellkkiekkteeseekaeellkafneqeesdyivvf 141
                    e +++ +++++ k++ +  + ++  v + +e+++ +l++ +k +  +    ++ l +++ ++++++++ +
     KHJ34716.1  14 EQKNLQAKITQKKKSAT--KKSRRGVVTECEELELQLRERQKYERMEI---DKELAQIEIKDSAHSSIDH 78 
                    33344444444333333..55555555566666666665553333332...4556666666666666655 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0029
                    -B--SSTHHHHHHH CS
  Peptidase_C65  44 rvrgDGnCfyRafl 57 
                     +r DG+C+++a++
     KHJ34716.1 166 FIRPDGHCLFSAVA 179
                    4799********96 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 9.1e-05
                    HHHHHHHHHHTHHHHGGGS-TT--HHHHHHHHTSSTT--B-HHHHHHHHHHTT--EEEE CS
  Peptidase_C65 143 RlltsaelkthadeyepFldelstveeFceqevepvnkEaDnvqitaLaealgvkvrVe 201
                    R  + a++ +h d++ ++lde   ++++ e+ ++ +++   ++++ aLa++ +vk+ ++
     KHJ34716.1 206 RESAAAYIDEHTDDFAAWLDE--PLAQYVEK-IRNTAEWGGHLELLALARCYKVKICII 261
                    555789***************..899**976.6********************999875 PP

>> YqzH  YqzH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   1.2   0.00012      0.69      20      47 ..       4      31 ..       2      33 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00012
        YqzH 20 dtelmplseeeqkeLveriqekkkeqed 47
                ++e+++ + +eqk+L ++i +kkk+ ++
  KHJ34716.1  4 EDEMLKRHRNEQKNLQAKITQKKKSATK 31
                5699*******************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2339  (0.130459); expected 358.6 (0.02)
Passed bias filter:                      617  (0.0344135); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 2248.88
//
Query:       KHJ34717.1  [L=263]
Description: putative nad -binding rossmann-fold containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.5e-44  150.8   0.0    5.6e-44  150.4   0.0    1.0  1  adh_short_C2  Enoyl-(Acyl carrier protein) reductase
    1.4e-42  145.4   0.0    2.7e-42  144.5   0.0    1.4  2  adh_short     short chain dehydrogenase
      6e-07   29.5   0.0    1.7e-06   28.1   0.0    1.7  2  KR            KR domain
  ------ inclusion threshold ------
       0.16   11.3   0.0       0.43    9.9   0.0    1.7  2  DUF1776       Fungal family of unknown function (DUF1776)


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.4   0.0   1.3e-47   5.6e-44       1     232 [.      18     255 ..      18     256 .. 0.93

  Alignments for each domain:
  == domain 1  score: 150.4 bits;  conditional E-value: 1.3e-47
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGH.HHHHHHHHHHTT..SEEEE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS-GGGH-HHH CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneea.kkrveelaeelg..aevlecDVtdeeqvealveevvekfgklDilvnnagiapklkgpfletsree 94 
                   G a+gIGr i + + ++Ga+v ++ ++ +a +++++el e +   a+++++D  + e+++ ++e++++   kl+ilvnn g      +p+ +++++ 
    KHJ34717.1  18 GGAKGIGRMISEGFVRNGAKVYISSRDVKAgEQACKELNELGRgsAHFIPADFYRLEDCNGMIEKLQKLESKLHILVNNSGSNWG--APYDKFPESA 112
                   6689**************************777777777755442336************************************9..********** PP

                   HHHHHHHHTHHHHHHHHHHHHHCTSC......CEEEEEEEGGGTSBSTTTT.HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCTGGGGSTT CS
  adh_short_C2  95 fdraldvnlyslfllakaalplmkeg......gsivnlssvgaervvpnyn.aygaaKaalealtrylAvelgpkgiRvNavspgpikTlaasgikg 184
                   + r+l  nl+ +f +++a+ pl+++       ++++n+ sv + r+ +  +  y+a+Ka+l++l+r lA++lg++ i++N+ + gp + +++++   
    KHJ34717.1 113 WTRVLTLNLTRVFTITQALTPLLERAatpndpARVINIGSVDGIRIPALETfSYSASKAGLHHLSRVLANHLGKRYITCNTLACGPFESKMMAATL- 208
                   *********************88877778899*********99888666667**************************************988776. PP

                   HHHHHHHHHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTT CS
  adh_short_C2 185 fdelleelearaplgrlgtpeevaeaalfLasdeasyitGqtlvvDgG 232
                    +++ +++++++pl+r+g+pe+v  a++fL s + ++++G+t++ DgG
    KHJ34717.1 209 -KSFGDQIKNEIPLKRIGKPEDVVGACIFLSSMAGAFVNGTTIALDGG 255
                   .7999******************************************9 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.5   0.0     6e-46   2.7e-42       1     189 [.      12     206 ..      12     210 .. 0.97
   2 ?   -2.9   0.0      0.86   3.8e+03     128     140 ..     231     243 ..     228     249 .. 0.80

  Alignments for each domain:
  == domain 1  score: 144.5 bits;  conditional E-value: 6e-46
                 SEEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT.TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS--SSGGGCSH CS
   adh_short   1 kvvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee.gakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgsgpfselse 98 
                 k+vlvtG+++GIGr i++ ++++Gakv++ +r  ++ e+++kel+e+ + +a++i++D    e+++ ++ek +k   kl++LvnN G ++ +p  ++ e
  KHJ34717.1  12 KIVLVTGGAKGIGRMISEGFVRNGAKVYISSRDVKAGEQACKELNELgRGSAHFIPADFYRLEDCNGMIEKLQKLESKLHILVNNSGSNWGAPYDKFPE 110
                 79*********************************************999************************************************* PP

                 HHHHHHHHHHTHHHHHHHHHHHHHHH....HCTTEEEEEEEEGGG.TSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHHHHH CS
   adh_short  99 eewervievNltgvflltravlpaml....kqssGrIvnvsSvag.kvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdmake 189
                 ++w rv+ +Nlt vf +t+a++p +      +  +r++n++Sv g + p  ++ +YsAsKa++++l+r la+ l ++ i++n++a+G+++++m+++
  KHJ34717.1 111 SAWTRVLTLNLTRVFTITQALTPLLEraatPNDPARVINIGSVDGiRIPALETFSYSASKAGLHHLSRVLANHLGKRYITCNTLACGPFESKMMAA 206
                 ************************9987777789***********999999*****************************************9876 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.86
                 TEEEEEEEEGGGT CS
   adh_short 128 sGrIvnvsSvagk 140
                  G+ ++ sS+ag 
  KHJ34717.1 231 VGACIFLSSMAGA 243
                 588999****994 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.1   0.0   3.7e-10   1.7e-06       3     110 ..      14     118 ..      13     135 .. 0.88
   2 ?   -2.3   0.0      0.82   3.7e+03     128     143 ..     231     246 ..     200     251 .. 0.80

  Alignments for each domain:
  == domain 1  score: 28.1 bits;  conditional E-value: 3.7e-10
                 EEEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-.EEEE----TT-HHHHHHHHHHHHHHSS---EEEE---------TTT- CS
          KR   3 ylitGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealga.evevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdklleem 100
                 +l+tGG+ g+G+ +++  +++ga+ + + sR+ +  +  ++  +el++lg  + ++++aD    ++ + ++e++++ e++++  ++  g    ++ ++ 
  KHJ34717.1  14 VLVTGGAKGIGRMISEGFVRNGAK-VYISSRDVK--A-GEQACKELNELGRgSAHFIPADFYRLEDCNGMIEKLQKLESKLHILVNNSGSNWGAPYDKF 108
                 79********************96.788999943..3.3447888888876599***********************************9999999999 PP

                 -HHHHHHHHT CS
          KR 101 taedleqvla 110
                  ++++++vl 
  KHJ34717.1 109 PESAWTRVLT 118
                 9999999985 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.82
                 -SEEEEEEEHHHHH-- CS
          KR 128 ldffvlfSSiagllgs 143
                 +   +++SS+ag + +
  KHJ34717.1 231 VGACIFLSSMAGAFVN 246
                 5567889999998765 PP

>> DUF1776  Fungal family of unknown function (DUF1776)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       0.3   1.4e+03       4      40 ..      12      47 ..      10      57 .. 0.80
   2 ?    9.9   0.0   9.5e-05      0.43     107     162 ..     104     159 ..      85     219 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.3
     DUF1776  4 dvvlvlGsptePltRsialDLerrGFiVfvtvesaee 40
                 +vlv G ++  + R i+  + r G  V++ +++ + 
  KHJ34717.1 12 KIVLVTGGAK-GIGRMISEGFVRNGAKVYISSRDVKA 47
                5888888765.699999*************9998775 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 9.5e-05
     DUF1776 107 pietiplsswaselnerllspiltlqallplltsrakqkakiivvnpsissslnlp 162
                 p ++ p+s+w+ +l+ +l   + ++qal pll+ +a+ +    v+n + +  + +p
  KHJ34717.1 104 PYDKFPESAWTRVLTLNLTRVFTITQALTPLLERAATPNDPARVINIGSVDGIRIP 159
                 778899***************************98855544444555555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       482  (0.0268838); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 1908.94
//
Query:       KHJ34718.1  [L=275]
Description: putative thiol methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.1e-36  124.4   0.0      7e-36  123.9   0.0    1.1  1  TPMT             Thiopurine S-methyltransferase (TPMT)
    3.1e-08   34.1   0.0    7.3e-08   33.0   0.0    1.6  1  Methyltransf_11  Methyltransferase domain
    1.3e-07   32.2   0.0      4e-07   30.6   0.0    1.8  1  Methyltransf_25  Methyltransferase domain
    1.5e-07   32.1   0.0    3.7e-07   30.8   0.0    1.7  2  Methyltransf_12  Methyltransferase domain
    6.3e-07   29.3   0.0    2.5e-06   27.4   0.0    1.8  2  Methyltransf_31  Methyltransferase domain
    1.2e-06   28.4   0.0    1.6e-06   28.0   0.0    1.3  1  Methyltransf_23  Methyltransferase domain
  ------ inclusion threshold ------
      0.016   14.4   0.0      0.047   12.9   0.0    1.7  2  N2227            N2227-like protein
      0.024   14.1   0.0      0.035   13.5   0.0    1.3  1  TehB             Tellurite resistance protein TehB
       0.12   12.7   0.0       0.27   11.6   0.0    1.5  1  AdoMet_MTase     Predicted AdoMet-dependent methyltransferase


Domain annotation for each model (and alignments):
>> TPMT  Thiopurine S-methyltransferase (TPMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.9   0.0   3.5e-39     7e-36       5     180 ..      28     216 ..      25     246 .. 0.81

  Alignments for each domain:
  == domain 1  score: 123.9 bits;  conditional E-value: 3.5e-39
                 HHHHHHHTT--TT--SS--HHHHHHHHT.T-.......S--EEEEEET-TT-HHHHHH-BTTEEEEEE-S-HHHHHHHHH.HHTTSGGGGGEEEE--.. CS
        TPMT   5 fWekrweeeqipfhqeevnpllkkfldalka.......kaglrvlvPlCGkaldlvwlAeqgrevvGvelselAvekffe.eanlepkvkelsgvkeys 95 
                  W+  w+e+  p++++  np+l  +l++ k         + l++lvP+CGk++d+  lA++g++  G+else A++++ + e+n + +  +  g k ++
  KHJ34718.1  28 LWDVLWKEGFCPWDKGSPNPALIDLLEEQKGllpipgtSKRLKALVPGCGKGYDVLLLAAHGYDTFGLELSETALTEAKNlEKNIQCNEIYNIGSKATE 126
                 6**************************9764222222135689*********************************97542444455555555666689 PP

                 .........-TTT---.SS-.....EEEEEEESSTTTS-GGGHHHHHHHHHHHEEEEEE..EEEEE---S---...-SS----HHHHHHHHG CS
        TPMT  96 ageiellcgdvFtlra.eelg...kfdliydraalvAlppelreryakslaelLkpdgeglLvtldypqaehe...GPPfsvpeaelealls 180
                 +g+i+ + gd+F+ +  e++g   +fdliyd+ +l+Alpp++r+++ k+++elL pdg+  Lv ++ p  + +   GPP+ ++ + +ea l 
  KHJ34718.1 127 KGDINWIVGDFFDSKSlENIGdnkQFDLIYDYTFLCALPPDMRSKWSKRMTELLSPDGR--LVCIEFPTYKPHstgGPPWGLSPEIYEAHLR 216
                 ************9865378885446**********************************..8888765544333459**9999888887665 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.0   0.0   3.6e-11   7.3e-08       2      96 .]      73     188 ..      72     188 .. 0.87

  Alignments for each domain:
  == domain 1  score: 33.0 bits;  conditional E-value: 3.6e-11
                      EET-TTSHHHHHHHHTTSEEEEEES-HHHHHHHHHHCCHHT-..............EEEETTEECCC...T.SS-TT.-EEEEEEES-CCC-.. CS
  Methyltransf_11   2 dvGcGtGrlaealakrgarvvgvDlskemlklakekaseegl..............kvefvvadaek...l.pfedn.sfDlvvssevlhhv.. 74 
                        GcG+G+ +  la +g++++g++ls+++l+ ak+  ++ +                ++++v+d+ +   l ++ dn +fDl++ + +l+ +  
       KHJ34718.1  73 VPGCGKGYDVLLLAAHGYDTFGLELSETALTEAKNLEKNIQCneiynigskatekgDINWIVGDFFDsksLeNIGDNkQFDLIYDYTFLCALpp 166
                      57****************************888655555444556999999999998999*****9755676799955**************99 PP

                      CCHHHHHHHHHHHEEEEEEEEE CS
  Methyltransf_11  75 edpekalkeiaRvLkpgGllvi 96 
                      + ++k  k +  +L p+G+lv+
       KHJ34718.1 167 DMRSKWSKRMTELLSPDGRLVC 188
                      999****************996 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.6   0.0     2e-10     4e-07       5      97 .]      75     184 ..      71     184 .. 0.79

  Alignments for each domain:
  == domain 1  score: 30.6 bits;  conditional E-value: 2e-10
                      T-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHH...............HHHHHTTT.....TEEEEESBC...CGBSS..STTTEEEEEEEST CS
  Methyltransf_25   5 GcGtGrltlalakrlgkakvtgvDiseemleaar...............eraeeegl.....nvefvqgda...edlpf..edgsfDlvvssga 73 
                      GcG+G ++l la+++  ++  g+++se++l +a+               +            ++++++gd+   ++l+   ++++fDl++  ++
       KHJ34718.1  75 GCGKGYDVLLLAAHG--YDTFGLELSETALTEAKnlekniqcneiynigS------KatekgDINWIVGDFfdsKSLENigDNKQFDLIYD-YT 159
                      9*************5..*****************6654444444433333......045556*********4433344244888*******.67 PP

                      .GGGSSHHHHHHHHHHHHHHEEEEE CS
  Methyltransf_25  74 .lhhlsdedlekalkeiarvLkpgG 97 
                       l+ l+++ + k  k++ ++L p+G
       KHJ34718.1 160 fLCALPPDMRSKWSKRMTELLSPDG 184
                      6999*******************99 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   1.9e-10   3.7e-07       4      99 .]      75     186 ..      72     186 .. 0.85
   2 ?   -3.1   0.0       6.8   1.4e+04      19      31 ..     251     263 ..     240     265 .. 0.68

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 1.9e-10
  Methyltransf_12   4 GcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg..................ssfDlvvasnvlhhl 79 
                      GcG G  +  l+++  + +  g+++s+ a+   ++ l k++ ++n+ +++  +  ++ d +                  ++fDl++   +l++l
       KHJ34718.1  75 GCGKGYDVLLLAAH--GYDTFGLELSETAL-TEAKNLEKNI-QCNEIYNIGSKATEKGDINwivgdffdskslenigdnKQFDLIYDYTFLCAL 164
                      9*******999999..**************.4444444444.355666666666556666699******************************* PP

  Methyltransf_12  80 .kdir.evldnirklLkpgGrl 99 
                       +d+r ++ +++ +lL+p+Grl
       KHJ34718.1 165 pPDMRsKWSKRMTELLSPDGRL 186
                      *999989999**********97 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 6.8
  Methyltransf_12  19 pdieytgvDisps 31 
                      ++++ +g+Di+++
       KHJ34718.1 251 QRTHSIGYDINEK 263
                      4788889999876 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   1.2e-09   2.5e-06       5     112 ..      69     191 ..      65     197 .. 0.76
   2 ?   -3.4   0.0       3.7   7.4e+03      21      39 ..     245     263 ..     240     264 .. 0.68

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 1.2e-09
  Methyltransf_31   5 lrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielAre...naqklgldnveFeq..........gdiee.lekl.led.ekfDlilsne 82 
                      l+ l +GCG+G++++ la     + + +G++ se+a++ A++   n q++++ n+  ++          gd+++ ++   + d ++fDli +  
       KHJ34718.1  69 LKALVPGCGKGYDVLLLAAH---GYDTFGLELSETALTEAKNlekNIQCNEIYNIGSKAtekgdinwivGDFFDsKSLEnIGDnKQFDLIYDYT 159
                      556668************44...4569**************9999888888887765555555555555888885554445559********99 PP

  Methyltransf_31  83 vlnala.dpd.kileeiervlkpggilliedp 112
                      +l+al+ d+  k  ++++++l+p+g+l++ ++
       KHJ34718.1 160 FLCALPpDMRsKWSKRMTELLSPDGRLVCIEF 191
                      9965542555155679***********99875 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 3.7
  Methyltransf_31  21 laeelgpkaevvGiDisee 39 
                      +a+   ++ + +G Di+e+
       KHJ34718.1 245 IAHFQPQRTHSIGYDINEK 263
                      5543445677899999986 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0   8.2e-10   1.6e-06      30     122 ..      75     193 ..      55     262 .. 0.76

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 8.2e-10
  Methyltransf_23  30 GcGtGillevlrengfsvtgvDlspeaveiae.....................kakkaqkdqfdeqeaae................pqgkfdlI 86 
                      GcG+G+   +l+++g++  g +ls+ a  +a+                     +++             +                ++++fdlI
       KHJ34718.1  75 GCGKGYDVLLLAAHGYDTFGLELSETALTEAKnlekniqcneiynigskatekGDI-------------NwivgdffdskslenigDNKQFDLI 155
                      9************************9999998777766665555555555555333.............13333333344444666777***** PP

  Methyltransf_23  87 vlrevlehvp.d.ppellrqiatllkpgGylllsepla 122
                      +   +l+ +p d   ++ +++ +ll+p+G+l++ e+  
       KHJ34718.1 156 YDYTFLCALPpDmRSKWSKRMTELLSPDGRLVCIEFPT 193
                      **********65678*****************999743 PP

>> N2227  N2227-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   2.4e-05     0.047      55      91 ..      65     101 ..      46     120 .. 0.83
   2 ?   -0.8   0.0      0.35     7e+02     136     170 ..     119     155 ..     101     161 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.4e-05
                 ...T-EEEEET-TT-HHHHHHHHTT-EEEEEE--HHH CS
       N2227  55 erekvkilvPGaGlGrlavelatkgyqvegnEfsyfm 91 
                  +++ k lvPG+G G  ++ la++gy + g E+s   
  KHJ34718.1  65 TSKRLKALVPGCGKGYDVLLLAAHGYDTFGLELSETA 101
                 5678999**************************9755 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.35
                 ------TTS--EEEEES-HHHHH--SS..HTT-EEEE CS
       N2227 136 eplselkrkknlsmaagdflevykeee..aaesydvv 170
                 ++ s++++k++++  +gdf + ++ e+  +++++d +
  KHJ34718.1 119 NIGSKATEKGDINWIVGDFFDSKSLENigDNKQFDLI 155
                 456788899999999****998876653455666655 PP

>> TehB  Tellurite resistance protein TehB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.7e-05     0.035      32      80 ..      69     120 ..      63     178 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.7e-05
                 -EEEEES-TTSHHHHHHHHTT-EEEEEES-HHHHH...HHHHHHHHTT-TTE CS
        TehB  32 gkvldlgcgqgrnslylsllgydvtawdknensia...fleeikekenlkni 80 
                  k+l  gcg+g + l l++ gyd   ++  e++++   +le+ ++ +++ ni
  KHJ34718.1  69 LKALVPGCGKGYDVLLLAAHGYDTFGLELSETALTeakNLEKNIQCNEIYNI 120
                 588999******************9999888876511144444443333333 PP

>> AdoMet_MTase  Predicted AdoMet-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   0.00013      0.27      66      96 ..      75     105 ..      63     117 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 0.00013
  AdoMet_MTase  66 gcgngllvyvlaaegykgygidlrkrklwel 96 
                   gcg g  v +laa gy  +g++l    l e 
    KHJ34718.1  75 GCGKGYDVLLLAAHGYDTFGLELSETALTEA 105
                   9********************9987766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       300  (0.0167327); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1968.16
//
Query:       KHJ34719.1  [L=192]
Description: hypothetical protein EV44_g3150 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.28s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1362.79
//
Query:       KHJ34720.1  [L=207]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      341  (0.0190195); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1607.99
//
Query:       KHJ34721.1  [L=414]
Description: putative gpi-anchored cell surface glycoprotein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
     0.0014   18.4   0.0     0.0034   17.2   0.0    1.6  1  Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein
  ------ inclusion threshold ------
      0.052   13.8   1.7       0.11   12.7   0.4    2.0  2  dsRBD2       Double-stranded RNA binding domain 2
          1    9.5   7.3        6.1    7.0   0.3    2.9  2  MAGI_u1      Unstructured region on MAGI


Domain annotation for each model (and alignments):
>> Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   5.7e-07    0.0034      14     118 ..      23     120 ..      10     122 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 5.7e-07
                  SSEEEEEEECTTTEEEEEESS-....HHHHHHHHHHTTT-EEEEEEEEEECCSECCEEEEEEEEE--TTS-HHHHHHHHHHHHHHHHHCTTSEEEEEE CS
  Cofilin_ADF  14 tkyilfkidddkeeivveeege....tyeelreelpeseprYavydveyehddeskrsklvfIswvPdsapikqkmlyasskdalkkelkgisveiea 107
                    ++l+k+ +  +++ + ++g+    +++e ++  ++s p ++++++           k v+I +vP +++   ++ +  + +a+ + +     ++ +
   KHJ34721.1  23 GGWFLLKYASR-DKVDLLARGDsgtvEMQETIARYEDSSPLFGFLRFR---------RKSVLIKYVPGGCSRLVQARVTVHFNAISDHF-PHDLTFSI 109
                  56999**9976.69999998888756555555556999********97.........688*****************************.89999*** PP

                  -CGGCCSHHHH CS
  Cofilin_ADF 108 tdldelteeel 118
                  t+ +el + +l
   KHJ34721.1 110 TSSHELRDTAL 120
                  *****987765 PP

>> dsRBD2  Double-stranded RNA binding domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.4   1.8e-05      0.11      30     121 ..     100     190 ..      87     214 .. 0.83
   2 ?   -0.6   0.0      0.23   1.4e+03     121     139 ..     379     400 ..     322     405 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.8e-05
      dsRBD2  30 sfPrelLcsfCrqhrLsePvfsissapvksssellrsakklkdseskekeeelengkevakekeesaesgssfrCevkilsksqdlilecsp 121
                  fP +l +s+   h+L +  +s  ++  ++s ++++s+++l+ ++  e +ee+e++++v++++  s  s+ +f C  k++s s+  i   s+
  KHJ34721.1 100 HFPHDLTFSITSSHELRDTALSAACSFHSTSGSTSSSTSSLQRRQLMEITEEEEEETRVNRKSVASDISEGEF-CVAKVISISESSISPSSK 190
                 69**********************9888888999999999999999998888888888888777777767776.999**9987776655444 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.23
      dsRBD2 121 pkelykkq...sdaiqnasLkv 139
                 ++e++kk+    da++++s+kv
  KHJ34721.1 379 AQEMWKKKmeaADALHSSSIKV 400
                 4455555511235566666665 PP

>> MAGI_u1  Unstructured region on MAGI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   2.0    0.0074        44      23      56 ..     136     170 ..     125     171 .. 0.70
   2 ?    7.0   0.3     0.001       6.1      24      51 ..     288     315 ..     282     320 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0074
     MAGI_u1  23 SyndMe.nAgIeppeeeeeedspmnssfta.dssee 56 
                 S +  + +   e +eeeeee  + n   +a d+se 
  KHJ34721.1 136 STSSLQrRQLMEITEEEEEETRV-NRKSVAsDISEG 170
                 45666634455677888888887.999999999996 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.001
     MAGI_u1  24 yndMenAgIeppeeeeeedspmnssfta 51 
                  n+ e+  I p+++  ++  +mns +  
  KHJ34721.1 288 WNNYEKEVIRPTSDSGNQTIVMNSPPSS 315
                 5999********************8765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (414 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       927  (0.0517039); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2991.71
//
Query:       KHJ34722.1  [L=186]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.12   12.1   0.8       0.18   11.6   0.8    1.1  1  TACC_C       Transforming acidic coiled-coil-containing prote
        1.4    9.0  10.7        3.8    7.6  10.7    1.7  1  Zn_Tnp_IS91  Transposase zinc-binding domain


Domain annotation for each model (and alignments):
>> TACC_C  Transforming acidic coiled-coil-containing protein (TACC), C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.8     2e-05      0.18     120     176 ..     115     171 ..     109     173 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2e-05
      TACC_C 120 eeylarvkkeeqRYqaLkahaeekLekAneeiaqvrskakaetaalqasLrkeqlkv 176
                 ++ l+++++ +qR  + ka ae  + +A+     v++ ++++++ +qa +  +++ +
  KHJ34722.1 115 KDQLKTIRQMGQREYHAKARAEAAVIRAEVATTSVERLQSTDQSNVQAIIPTNEMAM 171
                 7899*********9999*********************************9999976 PP

>> Zn_Tnp_IS91  Transposase zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6  10.7   0.00042       3.8      26      69 ..      48      98 ..      40     108 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00042
  Zn_Tnp_IS91 26 kilrCrtaalGfary.......eCeeCghekivyfsCksrh.CpsCqkkate 69
                 +i++C++  +Gf+         +Ce+C+++ ++++ Ck    C +C+  +++
   KHJ34722.1 48 SIQQCKR-YHGFHATrgcsrapACENCSSTMYSMNECKAPTnCRNCGGPHRS 98
                 5666766.446665544443357999*************988****987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (186 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       825  (0.0460148); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.27s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1342.96
//
Query:       KHJ34723.1  [L=246]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       575  (0.0320709); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.20s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1961.10
//
Query:       KHJ34724.1  [L=792]
Description: putative peptide chain release factor 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-41  141.7   0.0    3.2e-41  141.0   0.0    1.3  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    3.2e-24   84.8   0.0    1.1e-23   83.1   0.0    2.0  2  EFG_II       Elongation Factor G, domain II
    5.7e-19   67.9   0.0      1e-10   41.5   0.0    2.8  3  EFG_C        Elongation factor G C-terminus
    1.6e-07   31.6   0.1    3.8e-07   30.4   0.1    1.7  1  GTP_EFTU_D2  Elongation factor Tu domain 2
     0.0007   19.4   0.0     0.0013   18.5   0.0    1.4  1  RF3_C        Class II release factor RF3, C-terminal domain


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.0   0.0   8.8e-45   3.2e-41      23     193 ..       1     282 [.       1     283 [. 0.92

  Alignments for each domain:
  == domain 1  score: 141.0 bits;  conditional E-value: 8.8e-45
                 HHHHTTSSCHHHHHHHHHSTHCHSHHHHHHTSCSSCEEEEEE...............TTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB CS
    GTP_EFTU  23 LlyktgaiskkgekaeeervlDtlkeErergiTiksaaisle...............ketkkylinliDtPGHvdFskevirglrvlDgavlvvdaveG 106
                 +ly++g ++  g ++++++v+D+l++Er+rgiTi+saa++++               ++   ++inliDtPGH+dF+ ev r+lr+lDga+ ++d v G
  KHJ34724.1   1 MLYYSGLTRCIGDVDDGSTVTDFLPAERARGITIQSAAVTFHwppinnannirsnqqRSLCPHTINLIDTPGHADFTFEVLRSLRILDGAICILDGVAG 99 
                 578888889999999999**********************************99875588899************************************ PP

                 STHHHHHHHHHHHHTTTEEEEEEESCGSTHHHHHHHHHHHHHHHHHH.................................................... CS
    GTP_EFTU 107 vepqteevlrlalkegvpiivfiNKmDrlkaelkeiveevkqklsrk.................................................... 153
                 ve+qte v+ +a+k ++p+i+f+NKmDr +a+++++v+++ ++l++                                                     
  KHJ34724.1 100 VEAQTEIVWTQAQKFNIPRIIFVNKMDRDGATFEKTVKDIATHLRSFpivcqipwweggkgnfvgvgdainlcalkwrpntdgmnvkrleiqdlsqedp 198
                 ********************************************555**************************************************** PP

                 ...........................................HHHHHHHHHTTT.TTEEEEEEBTTTTBTHHHHHHHHHHHSH CS
    GTP_EFTU 154 ...........................................eeklekygekge.kevpvvfgSalkgegvktllealvellp 193
                                                            +e+l+   ++g+ k  pv+ g+++++ gv++ll+a+ + lp
  KHJ34724.1 199 kfcaelirarkclvenlcefdepildlwlqvnddtmaikgqdiQESLRRCIMDGSgKLAPVFLGASFRNIGVQPLLDAINNILP 282
                 ******9999999999999999999999998888777776666555555544444799*********************99998 PP

>> EFG_II  Elongation Factor G, domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       4.1   1.5e+04      25      35 ..     190     200 ..     189     202 .. 0.84
   2 !   83.1   0.0   3.1e-27   1.1e-23       1      74 [.     438     511 ..     438     512 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 4.1
      EFG_II  25 LarlleEDptl 35 
                 ++ l++EDp +
  KHJ34724.1 190 IQDLSQEDPKF 200
                 67899****87 PP

  == domain 2  score: 83.1 bits;  conditional E-value: 3.1e-27
      EFG_II   1 fPePvislaiepkskadedklskaLarlleEDptlrverdeeTketilsGmGelHleivverlkreykvevelg 74 
                 +P+Pv+++aiep++ ++e+++++ La ll+EDp+l+v+ d+++++++lsGmGelHlei+ +rl ++ k+++++g
  KHJ34724.1 438 IPPPVFFAAIEPHNIGEEKNVANLLAILLREDPSLQVNIDNDSGQMLLSGMGELHLEIARDRLINDLKAKASMG 511
                 7*******************************************************************999887 PP

>> EFG_C  Elongation factor G C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       4.3   1.5e+04       4      19 ..     220     235 ..     219     246 .. 0.83
   2 !   23.5   0.0   1.2e-08   4.2e-05       2      44 ..     668     710 ..     667     724 .. 0.85
   3 !   41.5   0.0   2.8e-14     1e-10      39      86 ..     742     789 ..     731     792 .] 0.88

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 4.3
                 EEEEEEEEEEECCCCC CS
       EFG_C   4 EPivkveievpeeyvg 19 
                 EPi ++ ++v+++ ++
  KHJ34724.1 220 EPILDLWLQVNDDTMA 235
                 9999999999999875 PP

  == domain 2  score: 23.5 bits;  conditional E-value: 1.2e-08
                 EEEEEEEEEEEEECCCCCCHHHHHHH.CT-EEEEEEEE.TTEEE CS
       EFG_C   2 llEPivkveievpeeyvgkvisdlss.rrGeiedmeqdasgrvi 44 
                 ++EP+++v i+++e  +g+vi dls+ r G+i++ +++ ++   
  KHJ34724.1 668 IMEPVMNVLISCDEASLGAVIHDLSAaRDGQIISLSNH-EDHDN 710
                 8*************************9******99998.55444 PP

  == domain 3  score: 41.5 bits;  conditional E-value: 2.8e-14
                 .TTEEEEEEEEEGGG-TTHHHCHHHCTTTS-EEEEEEEEEEE--HHHH CS
       EFG_C  39 asgrviieaeiPlaeligfateLrslTkGegsfsmefsgYeevpgdkl 86 
                  s+r  ++a++Pl+e++g+ + LrslT+G+g+f m f++Ye+++++k 
  KHJ34724.1 742 PSHRRQVRANVPLREMVGYLKHLRSLTAGRGTFIMNFDKYEKLKESKE 789
                 578999*************************************99886 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.1   1.1e-10   3.8e-07       3      73 ..     348     412 ..     346     413 .. 0.88

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 1.1e-10
                  EEEEEEEESEEETTEEEEEEC.TCTTSEEEEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCEE CS
  GTP_EFTU_D2   3 valgrvysGtlkkGdevrilg.ndtskkeivtrissletfhededeavaganaGvivaikgledaiivGdtl 73 
                  ++++rvysG +k++  +++   + ++k+    ri +++++++   ++++  n G+i  ++gl+++ ++Gdtl
   KHJ34724.1 348 LVYVRVYSGSIKRNSSLWNSNlQISEKS---PRILQMLASKA---IEINQINTGQIGVVVGLKHT-RTGDTL 412
                  79*****************998888777...78888888866...9999999999999999***6.*****9 PP

>> RF3_C  Class II release factor RF3, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   3.8e-07    0.0013       8     100 ..     440     531 ..     436     545 .. 0.83

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 3.8e-07
                 --SEEEEEEESSGGGHHHHHHHHHHHHHCT.SSEEEEET.TSS-EEEEESSTHHHHHHHHHHHHHH---EEEEE-S--EEEEEE-SSH.HHHHH CS
       RF3_C   8 aPElfarvrlkdplkrkqlrkgleqLaeEG.avqvfkeeeageelilgaVGqLQfeVveeRlknEYgvevrleslpyslarwvesedekkklee 100
                 +P +fa ++ ++  ++k+  + l  L  E    qv  + +++ +++l+ +G+L +e+ ++Rl n  ++++++ s+++s+   v+s + + + ++
  KHJ34724.1 440 PPVFFAAIEPHNIGEEKNVANLLAILLREDpSLQVNID-NDSGQMLLSGMGELHLEIARDRLINDLKAKASMGSVEISYRECVTSISPE-TQAN 531
                 57899******************999888725566555.5899***********************************99999776654.2333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (792 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       461  (0.0257125); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.26s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 5476.61
//
Query:       KHJ34725.1  [L=119]
Description: hypothetical protein EV44_g2419 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.18   11.6   0.0       0.43   10.4   0.0    1.6  1  DUF4431   Domain of unknown function (DUF4431)
        1.4    9.5   8.1       0.42   11.2   3.6    2.0  2  PRAS      Proline-rich AKT1 substrate 1


Domain annotation for each model (and alignments):
>> DUF4431  Domain of unknown function (DUF4431)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   4.8e-05      0.43      30      43 ..      84      97 ..      84     101 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 4.8e-05
     DUF4431 30 haqtghHhTpvlLd 43
                +a t hH+T +l+ 
  KHJ34725.1 84 LAGTRHHFTKILCG 97
                699*********97 PP

>> PRAS  Proline-rich AKT1 substrate 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   3.6   4.7e-05      0.42       7      46 ..      17      58 ..      13      97 .. 0.77
   2 ?    0.8   0.1     0.078     7e+02      20      37 ..      99     116 ..      97     119 .] 0.83

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4.7e-05
        PRAS  7 edslsrDcePffesdeeeestD..gslsedaPaksrevalkq 46
                +d ++rD +Pf++s +  es D   + s + P + ++ ++ q
  KHJ34725.1 17 QDRQARDKDPFYSSSSYSESSDenDEKSTSSPIRKESYQTLQ 58
                68899*******998876666645667777788777766553 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.078
        PRAS  20 sdeeeestDgslsedaPa 37 
                 +d+eees+  + s+++P 
  KHJ34725.1  99 ADKEEESNKKQKSSRVPI 116
                 589999999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       907  (0.0505884); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 858.90
//
Query:       KHJ34726.1  [L=819]
Description: putative adam family of metalloprotease adm-b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.4e-60  204.1   5.2    2.4e-60  204.1   5.2    2.6  2  Reprolysin_5     Metallo-peptidase family M12
      2e-51  174.7   2.0      2e-51  174.7   2.0    1.7  2  Reprolysin_2     Metallo-peptidase family M12B Reprolysin-lik
    9.7e-46  156.0   2.3    2.2e-45  154.8   2.3    1.6  1  Reprolysin_4     Metallo-peptidase family M12B Reprolysin-lik
    2.3e-16   60.3  29.7    2.3e-16   60.3  29.7    4.7  3  Disintegrin      Disintegrin
    8.1e-11   42.5   0.0    2.2e-10   41.1   0.0    1.8  1  Reprolysin_3     Metallo-peptidase family M12B Reprolysin-lik
     0.0019   18.7  12.6     0.0019   18.7  12.6    5.2  4  ADAM_CR_2        ADAM cysteine-rich domain
  ------ inclusion threshold ------
      0.033   14.4   0.5        0.3   11.3   0.0    2.6  2  Pep_M12B_propep  Reprolysin family propeptide


Domain annotation for each model (and alignments):
>> Reprolysin_5  Metallo-peptidase family M12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.1   5.2   9.4e-64   2.4e-60       1     196 []     280     494 ..     280     494 .. 0.94
   2 ?  -12.1  12.5         7   1.8e+04     159     164 ..     573     578 ..     537     620 .. 0.61

  Alignments for each domain:
  == domain 1  score: 204.1 bits;  conditional E-value: 9.4e-64
  Reprolysin_5   1 ktrtvall.vaaDcsfvaafggdaaaqanivnlvnrasnvyeresnislglanvtildeedpstase.......asstgdaselLnefqsassalrg 89 
                   +tr+val+ va+Dc+++a f++++a++ani+n++n+as+vye+++ni lgl+n+ti+d ++p  as+       +s+  d++ +Ln f    sa+rg
    KHJ34726.1 280 TTRRVALVgVATDCTYTAGFNSTTAVRANIINVINSASQVYESSFNIMLGLQNLTISDASCPIVASSaapwnigCSNAIDIQGRLNLF----SAWRG 372
                   589*****************8866**************************************999999********************....***** PP

  Reprolysin_5  90 qqnddlailflmtnfsgg..vGlAwlgqlcnsgsagsvstrveks.....nsvvvstatevqvvaHElGHnfGavHDcdsss........esqsCsl 171
                   q +d++a+++l +++++g  vGlAwlgqlc  +s+ + s+ ++++     ++vvv+t+te+qvvaHE+GH+fGavHDc+++s        ++q+C+l
    KHJ34726.1 373 QRKDNNAYWTLLSTCGTGpaVGLAWLGQLCVGTSQTGPSSVTSMNetvsgANVVVRTGTEWQVVAHETGHTFGAVHDCTAKSctdgktvvSQQCCPL 469
                   ******************************77776666655444456678******************************99*************** PP

  Reprolysin_5 172 snstepaggryiMapssspnstdfS 196
                   s+ t++agg+yiM+p +sp+++ fS
    KHJ34726.1 470 STTTCDAGGSYIMNPNTSPKIQIFS 494
                   ******************9999887 PP

  == domain 2  score: -12.1 bits;  conditional E-value: 7
  Reprolysin_5 159 Dcdsss 164
                   Dc+sss
    KHJ34726.1 573 DCCSSS 578
                   444444 PP

>> Reprolysin_2  Metallo-peptidase family M12B Reprolysin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.7   2.0   7.8e-55     2e-51       2     192 ..     303     505 ..     302     507 .. 0.87
   2 ?   -6.3   2.7         7   1.8e+04     142     182 ..     541     583 ..     538     586 .. 0.58

  Alignments for each domain:
  == domain 1  score: 174.7 bits;  conditional E-value: 7.8e-55
  Reprolysin_2   2 gavteelvnvlnrvnqiYeeddinislrlrn....eaeieatteasdsgnnycnssttevrrlnllsqlegekdydlahlvllgtf.sggvlGLayv 93 
                    av+++++nv+n+++q+Ye   +ni l+l+n     a +++ +++ +++n  c+ ++++  rlnl+s+++g++++ +a+++ll+t+ +g+ +GLa++
    KHJ34726.1 303 TAVRANIINVINSASQVYE-SSFNIMLGLQNltisDASCPIVASSAAPWNIGCSNAIDIQGRLNLFSAWRGQRKDNNAYWTLLSTCgTGPAVGLAWL 398
                   5799***************.**********9999999************************************************************ PP

  Reprolysin_2  94 gqicqkeass.rktntglsttan.sgsaveetkeidvvaHEvGHaFGatHdndgs........sasegveenaatsvedaggkfiMapasksnndlF 180
                   gq+c  +++  ++++t++  t+   +  v++ +e++vvaHE GH+FGa+Hd++ +          +++++    t  +dagg++iM+p     ++ F
    KHJ34726.1 399 GQLCVGTSQTgPSSVTSMNETVSgANVVVRTGTEWQVVAHETGHTFGAVHDCTAKsctdgktvVSQQCCPLSTTT--CDAGGSYIMNPNTSPKIQIF 493
                   ****7665551447777765443033344449*********************9988888887455577887777..***********99999999* PP

  Reprolysin_2 181 Spcsislisdvl 192
                   Spcs+++i+++ 
    KHJ34726.1 494 SPCSVGNICSAI 505
                   *********876 PP

  == domain 2  score: -6.3 bits;  conditional E-value: 7
  Reprolysin_2 142 dndgssasegveenaatsvedaggkfiMapask...snndlFSp 182
                   d+ gs  + + + +++t +++ +g+ +  p+++   s   +F p
    KHJ34726.1 541 DCGGSVSCGSNPCCNPT-TCKFQGNAVCDPSNEdccSSSCQFKP 583
                   34444444344556666.78888888888886544455556665 PP

>> Reprolysin_4  Metallo-peptidase family M12B Reprolysin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.8   2.3   8.5e-49   2.2e-45       1     197 [.     281     502 ..     281     511 .. 0.89

  Alignments for each domain:
  == domain 1  score: 154.8 bits;  conditional E-value: 8.5e-49
  Reprolysin_4   1 tvrvvrvavavdpeyvaelgsvdevraainalvtvlnevYgrdlnvrLeli....sdqdviytdsetdsfaadisgedlgnsslatltstrdskdyD 93 
                   t+rv++v+va+d++y+a ++s  +vra+i+++++ +++vY++ +n+ L l     sd  ++   s++++++  +s     + +l+ + ++r+++++ 
    KHJ34726.1 281 TRRVALVGVATDCTYTAGFNSTTAVRANIINVINSASQVYESSFNIMLGLQnltiSDASCPIVASSAAPWNIGCSNAIDIQGRLNLFSAWRGQRKDN 377
                   89***********************************************988889*******************9776669**************** PP

  Reprolysin_4  94 laallrdtr.asqqnvgvawvgalcls..........arq.nk.kasgvaasrdeydifAHEiGHtfGaaHdls............degeglsskte 165
                   +a++++      + +vg+aw+g+lc+           + + +  +a++v +++ e++++AHE GHtfGa+Hd+             +++++ls  t+
    KHJ34726.1 378 NAYWTLLSTcGTGPAVGLAWLGQLCVGtsqtgpssvtSMNeTVsGANVVVRTGTEWQVVAHETGHTFGAVHDCTaksctdgktvvsQQCCPLSTTTC 474
                   ****99887577888**********76333555444444433334466666688******************************************* PP

  Reprolysin_4 166 egsgqtIMsyaseasqeafapisirliavsic 197
                   ++ g++IM++    + + f+p+s+ +i    c
    KHJ34726.1 475 DAGGSYIMNPNTSPKIQIFSPCSVGNI----C 502
                   ************************999....2 PP

>> Disintegrin  Disintegrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   8.1       4.7   1.2e+04      11      67 ..     447     503 ..     439     529 .. 0.56
   2 !   60.3  29.7     9e-20   2.3e-16       1      76 []     535     611 ..     535     611 .. 0.96
   3 ?  -11.0  18.2         7   1.8e+04      12      44 ..     668     700 ..     613     714 .. 0.48

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 4.7
  Disintegrin  11 eeeckkdkCcdaktCklkkgaqC.sageCckek.CklksagtvCreakdeeCdleeyCd 67 
                   ++c+ ++C d kt   +  + C  +++ c++    +++ +t  + +  + C++ ++C+
   KHJ34726.1 447 VHDCTAKSCTDGKTVVSQ--QCCpLSTTTCDAGgSYIMNPNTSPKIQIFSPCSVGNICS 503
                  555654555553322222..223422333332213445555555555555555555554 PP

  == domain 2  score: 60.3 bits;  conditional E-value: 9e-20
  Disintegrin   1 eegEecDcGaeeeckkdkCcdaktCklkkgaqC..sageCckekCklksagtvCreakdeeCdleeyCdGksaeCped 76 
                  e+gE+cDcG + +c +++Cc+++tCk++ +a+C  s++ Cc+++C++k+ + vCr+++ + Cd ee+C+G+s  Cp+d
   KHJ34726.1 535 ESGEDCDCGGSVSCGSNPCCNPTTCKFQGNAVCdpSNEDCCSSSCQFKPLSAVCRPSTGS-CDPEETCSGTSGDCPAD 611
                  78********999*88*****************9888*******************9888.***************97 PP

  == domain 3  score: -11.0 bits;  conditional E-value: 7
  Disintegrin  12 eeckkdkCcdaktCklkkgaqCsa.geCckekCk 44 
                   e+  d  c++ + ++ +g+ C+a g+C + +C+
   KHJ34726.1 668 PEFGADI-CYSMQQNFLDGTPCQAsGKCVNGQCQ 700
                  1222122.22233333334445222555555554 PP

>> Reprolysin_3  Metallo-peptidase family M12B Reprolysin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.0   8.7e-14   2.2e-10       2     124 .]     307     449 ..     306     449 .. 0.78

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 8.7e-14
  Reprolysin_3   2 aaiaalvnranqiyerdlgirlqlvaiiitdkasdpytkkda...tealdelaevtae........aergqagyDlvhlftardesgvgGlAyvgsv 87 
                   a i+ ++n a+q+ye+ ++i l l+++ i+d +  p + ++a   +   +++ +++ +           ++++    +l+++   +   GlA++g++
    KHJ34726.1 307 ANIINVINSASQVYESSFNIMLGLQNLTISDAS-CPIVASSAapwNIGCSNAIDIQGRlnlfsawrG-QRKDNNAYWTLLSTCGTGPAVGLAWLGQL 401
                   6899***********************999986.666666665556666666666655888888852.4566666778888888899********** PP

  Reprolysin_3  88 cnsskkagvnsgssvlgkvga...........dtvaHEiGHnfganHt 124
                   c  ++++g +s++s++  v+            ++vaHE GH fga H+
    KHJ34726.1 402 CVGTSQTGPSSVTSMNETVSGanvvvrtgtewQVVAHETGHTFGAVHD 449
                   ******666666654444433566778888*****************7 PP

>> ADAM_CR_2  ADAM cysteine-rich domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   2.5      0.37   9.5e+02      26      60 ..     440     476 ..     427     482 .. 0.73
   2 ?  -10.1  11.3         7   1.8e+04      50      61 ..     521     532 ..     486     560 .. 0.58
   3 ?  -13.4  28.2         7   1.8e+04      16      70 .]     582     634 ..     525     634 .. 0.79
   4 !   18.7  12.6   7.5e-07    0.0019       2      69 ..     631     699 ..     630     700 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.37
   ADAM_CR_2  26 k.....eesvCsklwCskdgkektcltkkvpaadgTsCgs 60 
                 +       ++C+   C++ +   t+ +++  ++  T+C  
  KHJ34726.1 440 TghtfgAVHDCTAKSCTDGK---TVVSQQCCPLSTTTCDA 476
                 44445556789999999976...78888999999999975 PP

  == domain 2  score: -10.1 bits;  conditional E-value: 7
   ADAM_CR_2  50 vpaadgTsCgsk 61 
                 + +  g++Cg++
  KHJ34726.1 521 ITTITGSQCGNG 532
                 555566666643 PP

  == domain 3  score: -13.4 bits;  conditional E-value: 7
   ADAM_CR_2  16 gseskkcpaekeesvCs.klwCskdgkektcltkkvpaadgTsCgskk..wClkgkCv 70 
                  + s  c+       C  + +Cs ++    c  +   a+dgT+Cg++    C +g+C+
  KHJ34726.1 582 KPLSAVCRPS--TGSCDpEETCSGTS--GDCP-ADLTAPDGTKCGNSSslTCASGQCT 634
                 4444455554..44443245677665..4675.6789********766559******6 PP

  == domain 4  score: 18.7 bits;  conditional E-value: 7.5e-07
   ADAM_CR_2   2 GelysadeQCrlafgseskkcpaek.eesvCsklwCskdgk.ektcltkkvpaadgTsCgskkwClkgkC 69 
                 G+  s+d QC+  +g  ++  ++ + ++  C ++ C  ++   + c ++++  +dgT+C+ +  C++g+C
  KHJ34726.1 631 GQCTSRDLQCKTLMGVFTQGNDTYAcSKGGC-QISCASPEFgADICYSMQQNFLDGTPCQASGKCVNGQC 699
                 9999**********97555444444344455.688999998899************************** PP

>> Pep_M12B_propep  Reprolysin family propeptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00012       0.3      31      91 ..      54     115 ..      22     170 .. 0.71
   2 ?   -0.1   0.1      0.39     1e+03     104     120 ..     639     655 ..     638     657 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00012
  Pep_M12B_propep  31 eeekeerlsyrlkafgkefhLnLepnsellapgftvethredgeereesp.qeeehCyYqGe 91 
                      ++ ++ +l ++l+  ++  +L L+pn+ ++ +g+tv++   dg+ r+++  +++e  +++G+
       KHJ34726.1  54 HAASKFELTFELHDGKQMIRLTLSPNNAVIQEGATVQYMAPDGSLRKSEIlDRSEYRVFKGD 115
                      23335788899999999********************9999988776643355555667776 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.39
  Pep_M12B_propep 104 tCsGlrGvirteneeYf 120
                       C+ l+Gv++ +n++Y 
       KHJ34726.1 639 QCKTLMGVFTQGNDTYA 655
                      5**************95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (819 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       925  (0.0515924); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.67u 0.31s 00:00:00.98 Elapsed: 00:00:00.44
# Mc/sec: 5610.82
//
Query:       KHJ34727.1  [L=567]
Description: hypothetical protein EV44_g3227 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.2e-31  107.1   0.1    2.1e-30  105.9   0.1    1.6  1  RVT_1           Reverse transcriptase (RNA-dependent DNA poly
    8.3e-07   29.2   2.8    9.3e-07   29.0   0.5    2.3  3  Retrotrans_gag  Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.9   0.1   2.3e-34   2.1e-30       1     222 []     302     462 ..     302     462 .. 0.97

  Alignments for each domain:
  == domain 1  score: 105.9 bits;  conditional E-value: 2.3e-34
                 EE-TT.S-EEE.......-THHHHCTB--.........-------HHHH.............HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET CS
       RVT_1   1 ipKkgpgsyRp.isllsvdykalnkliakrLkdvlekllsenqpgfrpgrstldavedllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvp 98 
                 ++K++ gs R  +     dy+ ln+l  k         + +++p + +              l++  kak+++klD+  aF++++ +e ++ +taf+++
  KHJ34727.1 302 VKKPS-GSLRFcV-----DYRELNRLKRK---------DRYPLPFIYET-------------LWNISKAKWFTKLDVIAAFHKIRIAEGDEWKTAFRTR 372
                 58999.*****55.....***********.........***********.............99*********************************** PP

                 .........................TEEEEESB--ST-TTHHHHHHHHHHHHHTT-T......TEEECTTEEEEEESSHHHHHHHHHHHHHHHHHTT-- CS
       RVT_1  99 tklinliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnellrelrkrakgvtllrYaDDililskskeelqelleaveewlkesglk 197
                                          +g+ye+ ++p+G++++ ++f+ ++n +lr++      +++++Y+DDili+s+sk+e++ ++++v + lke+gl+
  KHJ34727.1 373 -------------------------YGLYEWPVTPFGLANALITFQKYINWVLRDYLD----NFCSAYVDDILIYSESKSEHKVHVQKVLRSLKEAGLQ 442
                 .........................9*******************************9....7************************************ PP

                 BEGGG-EEE.....ESSEEETTEEE CS
       RVT_1 198 inpeKtklvlftvkseevkyLGvtl 222
                 +   K+++      ++++kyLG+++
  KHJ34727.1 443 LDIVKCEFE-----TQRIKYLGFII 462
                 *********.....9*******986 PP

>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.5     1e-10   9.3e-07      12      94 ..      59     139 ..      50     141 .. 0.86
   2 ?   -2.5   0.0      0.74   6.6e+03      52      77 ..     388     415 ..     364     438 .. 0.62
   3 ?   -3.1   0.0       1.1     1e+04      42      56 ..     523     537 ..     499     540 .. 0.59

  Alignments for each domain:
  == domain 1  score: 29.0 bits;  conditional E-value: 1e-10
  Retrotrans_gag  12 kswlkslvarsidasesWkdlkkaflktflpserkdqleeelsslrQgtesvreYvtrfktladqlde.vlteeakiekflaGL 94 
                     + w++  + ++     + +++ +++ k f+++e+  ++ ++l s+rQg++ +re+++ f++++ +++  ++teeak + ++a L
      KHJ34727.1  59 HPWIEYAKGSRSF---TVEEFLNRLDKAFVDPEKITKAIDKLNSIRQGNRDFREFLQDFEQTLLEAQAwGWTEEAKKSYLRADL 139
                     4555555555555...999********************************************************988776655 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.74
  Retrotrans_gag  52 elsslrQ.gtesvreYvtrf.ktladql 77 
                      l ++++  +  +r+Y+++f + ++d++
      KHJ34727.1 388 ALITFQKyINWVLRDYLDNFcSAYVDDI 415
                     4555555556667777777744444444 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 1.1
  Retrotrans_gag  42 pserkdqleeelssl 56 
                     +++r +++++ +++l
      KHJ34727.1 523 KFHRNSEAQSAFQNL 537
                     344555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (567 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      465  (0.0259356); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.29s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 4034.52
//
Query:       KHJ34728.1  [L=399]
Description: putative thioredoxin reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-16   61.0   0.0    2.2e-15   56.7   0.0    2.1  1  Pyr_redox_2     Pyridine nucleotide-disulphide oxidoreductase
    4.6e-06   26.1   0.0      0.026   13.8   0.0    2.3  2  Pyr_redox_3     Pyridine nucleotide-disulphide oxidoreductase
    8.9e-06   24.7   0.0    0.00039   19.3   0.0    2.3  2  HI0933_like     HI0933-like protein
    1.9e-05   24.4   0.0     0.0012   18.5   0.0    2.7  3  DAO             FAD dependent oxidoreductase
    3.7e-05   23.8   0.2       0.26   11.3   0.0    2.4  2  NAD_binding_9   FAD-NAD(P)-binding
    3.9e-05   22.9   0.0    0.00073   18.7   0.0    2.1  2  FAD_binding_2   FAD binding domain
     0.0001   21.5   0.5      0.019   14.1   0.1    2.2  2  GIDA            Glucose inhibited division protein A
    0.00014   22.0   0.0    0.00031   20.9   0.0    1.6  1  NAD_binding_8   NAD(P)-binding Rossmann-like domain
    0.00031   19.9   0.1     0.0033   16.5   0.0    2.3  3  Lycopene_cycl   Lycopene cyclase protein
     0.0093   15.2   0.0      0.015   14.6   0.0    1.3  1  FAD_binding_3   FAD binding domain
     0.0097   15.3   0.1      0.015   14.6   0.1    1.3  1  FAD_oxidored    FAD dependent oxidoreductase
  ------ inclusion threshold ------
      0.014   14.6   0.0      0.027   13.7   0.0    1.3  1  Thi4            Thi4 family
      0.027   13.6   0.0        4.9    6.2   0.0    2.1  2  K_oxygenase     L-lysine 6-monooxygenase (NADPH-requiring)
      0.049   14.2   0.1       0.18   12.4   0.1    1.9  2  Pyr_redox       Pyridine nucleotide-disulphide oxidoreductase
       0.07   12.0   0.0       0.12   11.1   0.0    1.4  1  Trp_halogenase  Tryptophan halogenase
        0.1   11.9   0.0       0.16   11.3   0.0    1.3  1  AlaDh_PNT_C     Alanine dehydrogenase/PNT, C-terminal domain
       0.13   12.2   0.0       0.48   10.3   0.0    1.9  1  HA1             Hemagglutinin I


Domain annotation for each model (and alignments):
>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.7   0.0   2.1e-18   2.2e-15       1     292 [.      49     350 ..      49     352 .. 0.80

  Alignments for each domain:
  == domain 1  score: 56.7 bits;  conditional E-value: 2.1e-18
                  CSEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHHHCHHHHHHHHHHHHH........HHHHCHHHHCCCCHCCTCEEEEESCEEEEETEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   1 kdvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcllskallgvaedaeias........evvkklnqgielllgeevvkidpgkkkvklekk 90 
                  +dvv++GgGpAGl+a   la+  ++v+l++  g+    + ++s  ++ + +  +i          +  k  +    +l + +v +i +g+ + + +++
   KHJ34728.1  49 FDVVIVGGGPAGLSALCSLARVRHEVLLID-SGEY---RNSPSRRVRDTIGSDDIPPalfryrarQ--KAAQFTSATLQNGTVESIVRGRDNSTFTTT 140
                  69***************************5.4433...3445555555555555555556687542..223333444555579999999977777666 PP

                  ECTCEEEEEESEEEE---EEE-BCTCTTC.TTBEECCSECHHHHHHCCSS-TSEEEEES-SHHHHHHHHHHHHHT-E.EEEEESSSSSS.TTS-HHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxx.xxxxxxxx RF
  Pyr_redox_2  91 kegdeekiaydklvlAtGssprdlgipGvaenvgklvrtldsaealklkllpkrivvvGgGyiGvElAaalaklgke.vtlveardrll.raldkels 186
                    +++++++  k++lAtG +  ++++pG ++ +g+++  ++ ++++++  +   + ++   +  v   ++ + l+k+ +  v   d++  r+l  + +
   KHJ34728.1 141 L-SNGQSYTSRKIILATGLRDVLPNVPGIEDAWGRGMYWCAWCDGWEHRDQS--LGIITTLPKLVQSVIHVSTLNKDiIAFVNGTDTPAnRQLLAASA 235
                  6.7999****************************************999998..888877777777788899999998999*********9999999* PP

                  HHHHHHHHHTTEEEEESCEEEEEEETTE..............EEEEEETTSCEEEESEEEE-S-EEES-HHCSHCCT-EEEETTEEE--TTSBESSTT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 187 aaleealekeGvevklgtsvkeidgnge..............klevvledgeeidadlvvvavGvrpstelleeklglelderggivvdeflrtnvpg 270
                     e++l++ Gv++  + ++  +++ ++              + +v ledg++i  +  + +   + +++ ++ k+g++l  + +i v +      pg
   KHJ34728.1 236 PGWEKYLKQAGVKIE-NRKISGFERLQDgsifrnetssqdydRFRVYLEDGSQILRSAFLASF-PKVQRSYAGAKIGVQL-VDEKIYVESADMKAAPG 330
                  ***************.99999999999999999999988555555999999999988888888.555555555999**99.77777777776677*** PP

                  EEE-GGGCTECCSS--HHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 271 iyaiGDvaggkggpelaqaAvq 292
                  ++a+GD     ++  ++++A  
   KHJ34728.1 331 VWAVGDAN--SDNSTNVPHALY 350
                  ******88..777777777765 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.0   2.5e-05     0.026       1      35 [.      52      85 ..      52      91 .. 0.92
   2 !   10.0   0.0   0.00036      0.38     100     147 ..     121     169 ..     103     177 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.5e-05
  Pyr_redox_3  1 iIiGaGPaGlaaaielkkagledylilEkgnigns 35
                 +I+G+GPaGl+a + l ++   ++l ++ g+  ns
   KHJ34728.1 52 VIVGGGPAGLSALCSLARVRH-EVLLIDSGEYRNS 85
                 7*******************9.79*****998877 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00036
  Pyr_redox_3 100 lfeeVesvkk..edegfevetske.tyeAkkviiAtGefdkPnklnipGee 147
                  ++ +Ves+ +  ++++f+ + s++ +y+++k+i+AtG   +  ++n+pG e
   KHJ34728.1 121 QNGTVESIVRgrDNSTFTTTLSNGqSYTSRKIILATGL--RDVLPNVPGIE 169
                  56789999985445667777777669***********9..55666666665 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   3.7e-07   0.00039       1      33 [.      49      81 ..      49      90 .. 0.93
   2 ?    2.9   0.0     0.034        36     131     163 ..     124     157 ..     107     164 .. 0.75

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 3.7e-07
                 -SEEEE--SHHHHHHHHHHHHTT--EEEE-SSS CS
  HI0933_like  1 kdviviGgGaAGlmaAisaakrgkrVlllekak 33
                 +dv+++GgG+AGl a  s+a+  ++Vll+++++
   KHJ34728.1 49 FDVVIVGGGPAGLSALCSLARVRHEVLLIDSGE 81
                 59****************************875 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.034
                  -EEEEEC.ETTE.EEEEE.TTEEEEESEEEE--- CS
  HI0933_like 131 evksvek.eedgkfrvktkseeeleadklvlAtG 163
                  +v+s+ + +++++f+ +++++++++++k++lAtG
   KHJ34728.1 124 TVESIVRgRDNSTFTTTLSNGQSYTSRKIILATG 157
                  5556544145566777779**************9 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   1.1e-06    0.0012       1      31 [.      50      81 ..      50      91 .. 0.86
   2 ?    2.6   0.0     0.078        82     155     203 ..     112     159 ..      99     179 .. 0.67
   3 ?   -1.1   0.0       1.1   1.1e+03     152     182 ..     238     268 ..     223     316 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 1.1e-06
                EEEEECTSHHHHHHHHHHHHTT..EEEEESSSS CS
         DAO  1 dvviiGGGiiGlstAyeLarrg..Vtllekgdi 31
                dvvi+GGG +Gls+   Lar    V+l+++g +
  KHJ34728.1 50 DVVIVGGGPAGLSALCSLARVRheVLLIDSG-E 81
                9*****************974348*****98.4 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.078
                 HHHHTT-EEEESECEEEEEE.EETCEEEEEEECT.EEE.EEEEEEEE--GGG CS
         DAO 155 aaealGveilegtevtglee.edgkvwgverttp.gen.daadavVnaaGaw 203
                 aa+   +++ +g +v+++ + +d+   +   t + g+  ++ +++++a+G+ 
  KHJ34728.1 112 AAQFTSATLQNG-TVESIVRgRDNSTFTT--TLSnGQSyTS-RKIILATGLR 159
                 344455777888.8999855233332333..2233665445.99******75 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1.1
                 HHHHHHHTT-EEEESECEEEEEE.EETCEEEE CS
         DAO 152 laraaealGveilegtevtglee.edgkvwgv 182
                   + ++++Gv+i ++ ++ g+e+ +dg + + 
  KHJ34728.1 238 WEKYLKQAGVKIENR-KISGFERlQDGSIFRN 268
                 556678888888887.8888876444443333 PP

>> NAD_binding_9  FAD-NAD(P)-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   0.00024      0.26       1      32 [.      52      78 ..      52      91 .. 0.82
   2 !   10.3   0.0   0.00048      0.51     107     154 ..     108     157 ..     102     159 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00024
  NAD_binding_9  1 aivGaGprGlavlerLlarakkkspleitlfd 32
                   +ivG+Gp+Gl++l  L++ +     +e+ l+d
     KHJ34728.1 52 VIVGGGPAGLSALCSLARVR-----HEVLLID 78
                   7***************9984.....6666666 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00048
  NAD_binding_9 107 llarlpegvtvevhraevvdleeradgq..avlladgaslaadaVvLAlG 154
                    + +++ + ++ ++ +++v+++ + +d+   + +l++g+s++ ++++LA+G
     KHJ34728.1 108 ARQKAAQFTSATLQNGTVESIVRGRDNStfTTTLSNGQSYTSRKIILATG 157
                    4556666667788899****999888742378889**************9 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   6.9e-07   0.00073       1      36 [.      50      85 ..      50      89 .. 0.94
   2 ?    2.1   0.0     0.079        84     372     401 ..     307     337 ..     240     348 .. 0.88

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 6.9e-07
                   SEEEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGS CS
  FAD_binding_2  1 DviViGsGlAGLaAAleaaeaGlkvavvekeqefgg 36
                   Dv+++G+G AGL+A  ++a+  ++v++++ ++++++
     KHJ34728.1 50 DVVIVGGGPAGLSALCSLARVRHEVLLIDSGEYRNS 85
                   9******************************99887 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.079
                    ES-EEE.BETTSBESTTEEESSBTEEE-STC CS
  FAD_binding_2 372 tmgGve.tdengrvldadgqpipGLYAaGev 401
                       Gv+ +de+  v +ad ++ pG +A+G +
     KHJ34728.1 307 AKIGVQlVDEKIYVESADMKAAPGVWAVGDA 337
                    55677658*********************87 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.1   1.8e-05     0.019       1      28 [.      50      77 ..      50      99 .. 0.85
   2 !    5.6   0.1    0.0069       7.3      99     149 ..     106     157 ..      99     174 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.8e-05
                CEEEE-SSHHHHHHHHHHHHTT--EEEE CS
        GIDA  1 dviViGgGhAGceAAlaaarlGakvlLi 28
                dv+++GgG AG+ A   +ar  ++vlLi
  KHJ34728.1 50 DVVIVGGGPAGLSALCSLARVRHEVLLI 77
                79*************************9 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0069
                 HHHHHHHHTSTTEEEEES-EEEEEECT.TEEEEEEETTS-EEEECEEEE--T CS
        GIDA  99 kevteklenepnleiieeeveelivee.kkvkgvvtedgetikakavviatG 149
                  + ++k  +    ++ +++ve+++    +++   ++++g+ ++++++++atG
  KHJ34728.1 106 YRARQKAAQFTSATLQNGTVESIVRGRdNSTFTTTLSNGQSYTSRKIILATG 157
                 556666677777899999****9764457888899***************** PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   2.9e-07   0.00031       1      29 [.      53      81 ..      53      95 .. 0.95

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 2.9e-07
                   EE--SHHHHHHHHHHHCCTEEEEEE-SSS CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagfdvlllekrd 29
                   IvG+G +Gl+a + La+ +++vll+++++
     KHJ34728.1 53 IVGGGPAGLSALCSLARVRHEVLLIDSGE 81
                   9*************************986 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   3.1e-06    0.0033       1      43 [.      50      90 ..      50      98 .. 0.88
   2 ?    0.5   0.0      0.23   2.4e+02     101     141 ..     117     158 ..     102     173 .. 0.82
   3 ?   -3.2   0.0       3.1   3.2e+03      65      97 ..     278     313 ..     269     333 .. 0.55

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 3.1e-06
  Lycopene_cycl  1 DvvviGaGpAglslAarlteakpglkvvlieaspsllfpnnyv 43
                   Dvv++G+GpAgls    l  a+ + +v+li++++    p ++v
     KHJ34728.1 50 DVVIVGGGPAGLSALCSL--ARVRHEVLLIDSGEYRNSPSRRV 90
                   9************99999..9***********99877776665 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.23
  Lycopene_cycl 101 gvklleakvesveeeea.geslvvleggrkirarlvvdargl 141
                     ++l +++ves++   + +  + +l++g+   +r ++ a+gl
     KHJ34728.1 117 SATLQNGTVESIVRGRDnSTFTTTLSNGQSYTSRKIILATGL 158
                    678999*****99988867888999**************995 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 3.1
  Lycopene_cycl  65 tivylddgkkillg...raYgrvsskrlkeellerl 97 
                     +vyl+dg++il +     + +v+++   +++  +l
     KHJ34728.1 278 FRVYLEDGSQILRSaflASFPKVQRSYAGAKIGVQL 313
                    455555555555444333444444444444444444 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   1.4e-05     0.015       2      32 ..      49      79 ..      48      90 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.4e-05
                   EEEEEE--SHHHHHHHHHHHHTTHHEEEEES CS
  FAD_binding_3  2 tdVlIVGaGpaGlmlallLseaGvrvvlvek 32
                    dV+IVG+GpaGl++   L++   +v+l++ 
     KHJ34728.1 49 FDVVIVGGGPAGLSALCSLARVRHEVLLIDS 79
                   69*************9999998777888875 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.1   1.4e-05     0.015       1      31 [.      50      80 ..      50      82 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.4e-05
  FAD_oxidored  1 DvvVvGGgpaGvaAAiaAaraGakvlLveer 31
                  Dvv+vGGgpaG+ A  + ar   +vlL++  
    KHJ34728.1 50 DVVIVGGGPAGLSALCSLARVRHEVLLIDSG 80
                  9***************************975 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.5e-05     0.027      18      47 ..      49      77 ..      47      80 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.5e-05
                EEEEEE--SHHHHHHHHHHHHCTTS-EEEE CS
        Thi4 18 sDvvivGaGssGLtaayylakkpdlkvail 47
                 DvvivG+G++GL+a   la+    +v+++
  KHJ34728.1 49 FDVVIVGGGPAGLSALCSLARV-RHEVLLI 77
                69**************999997.5555555 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0    0.0085         9       2      29 ..      48      73 ..      47      82 .. 0.84
   2 ?    6.2   0.0    0.0046       4.9     106     165 ..     112     165 ..     102     171 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0085
  K_oxygenase  2 ilDligiGiGpsnLsLailleevkkelk 29
                 ++D++++G Gp+ Ls  + l+ v+   +
   KHJ34728.1 48 QFDVVIVGGGPAGLSALCSLARVR--HE 73
                 58****************999988..33 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0046
  K_oxygenase 106 asqleeqvrfgeeveevepdeeeeeelltveskdaegeeeelearnlvlgvGtepkiPev 165
                  a+q+++    + +ve++   ++++   +t +      + +++++r+++l++G +  +P+v
   KHJ34728.1 112 AAQFTSATLQNGTVESIVRGRDNS--TFTTTL----SNGQSYTSRKIILATGLRDVLPNV 165
                  567777677777888888888764..455544....24789************9999975 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   0.00017      0.18       2      30 ..      51      79 ..      50      84 .. 0.93
   2 ?   -2.0   0.0       5.2   5.5e+03      46      57 ..     238     249 ..     223     263 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00017
                EEEECSSHHHHHHHHHHHHTTSEEEEEES CS
   Pyr_redox  2 vvvvGgGyiglElAgalaelgkkVtvver 30
                vv+vGgG  gl + + la+ +++V +++ 
  KHJ34728.1 51 VVIVGGGPAGLSALCSLARVRHEVLLIDS 79
                8***********************99986 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 5.2
                 HHHHHHHTTEEE CS
   Pyr_redox  46 lqeklekngiev 57 
                 ++++l++ g+++
  KHJ34728.1 238 WEKYLKQAGVKI 249
                 789999999997 PP

>> Trp_halogenase  Tryptophan halogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00012      0.12       1      34 [.      50      80 ..      50      85 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00012
                    EEEEE--SHHHHHHHHHHHHHTTTSSEEEEEE-S CS
  Trp_halogenase  1 kivivGGGtaGwlaAaalakalkgklevtlvese 34
                    ++vivGGG+aG  a + la++    +ev+l++s 
      KHJ34728.1 50 DVVIVGGGPAGLSALCSLARVR---HEVLLIDSG 80
                    69******************99...89***9986 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00015      0.16      29      63 ..      49      83 ..      32     128 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00015
                 -EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHH CS
  AlaDh_PNT_C 29 akvlviGgGvaGlqAiatakglgakVtvlDvrpar 63
                   v+++GgG aGl+A+   +++  +V ++D  + r
   KHJ34728.1 49 FDVVIVGGGPAGLSALCSLARVRHEVLLIDSGEYR 83
                 579*************************9986655 PP

>> HA1  Hemagglutinin I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00046      0.48      41      84 ..     340     385 ..     336     388 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00046
         HA1  41 deksklpqswavgvndgvnphfqlgyegggk..iditlrsvndvlq 84 
                 d+ +++p +   g +  v  hf+lg eg     i it rs  d+l+
  KHJ34728.1 340 DNSTNVPHALYSGKKAAVSAHFELGSEGLSEplIAITKRSESDLLR 385
                 778899999999****************7654499*****999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 3008.31
//
Query:       KHJ34729.1  [L=154]
Description: hypothetical protein EV44_g3750 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
      0.044   13.3   0.1      0.075   12.5   0.1    1.3  1  ATP-synt_Z  Putative AtpZ or ATP-synthase-associated
       0.16   11.1   0.0       0.24   10.5   0.0    1.3  1  NCA2        ATP synthase regulation protein NCA2


Domain annotation for each model (and alignments):
>> ATP-synt_Z  Putative AtpZ or ATP-synthase-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.1   8.3e-06     0.075      28      44 ..      33      50 ..      30      57 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 8.3e-06
  ATP-synt_Z 28 sqLWmVPvGL.vLlvTpv 44
                s  WmVP G  +L+ Tpv
  KHJ34729.1 33 SDVWMVPSGVaILASTPV 50
                578******868888997 PP

>> NCA2  ATP synthase regulation protein NCA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   2.7e-05      0.24       3      49 ..      46      92 ..      44     113 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 2.7e-05
        NCA2  3 llspsslrllvnsreeilewiqeavetvkgfwknwvvePikellkti 49
                 + p  + ++++s+++i + + +a    +++w+ +v+ Pik+ +k i
  KHJ34729.1 46 ASTPVKAAAILQSKSAIENRFGNATVERQELWTTFVIGPIKKKIKCI 92
                56677788999*****************************9877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       342  (0.0190752); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.21s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 1268.35
//
Query:       KHJ34730.1  [L=278]
Description: hypothetical protein EV44_g4149 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-23   82.7   0.0    3.2e-23   82.4   0.0    1.1  1  RVT_1     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_1  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.4   0.0   1.8e-27   3.2e-23      53     209 ..     112     268 ..      68     277 .. 0.89

  Alignments for each domain:
  == domain 1  score: 82.4 bits;  conditional E-value: 1.8e-27
                 .........HCCHTS--EEEEEEBCCGCCCSBB-GGGGGGG-EEET.........................TEEEEESB--ST-TTHHHHHHHHHHHHH CS
       RVT_1  53 davedllkalkkkkkaklllklDlkkaFdsvpleellrkltafkvptklinliksflstrsfsvrvngeeskgryekkglpqGsvlSPllfnlfmnell 151
                 +a+   +k+++++kk   +++ Dlk aFd    ++l+++l + + p++++n+++sf+s+rs+++ +++++++ +++ +glpqGs++SP+lf l++++ll
  KHJ34730.1 112 TALICDVKKAWENKKVVGIITTDLKAAFDGGLRNRLCYRLRSQGWPKHVVNWVSSFMSDRSAHICLDQSKTESLPILCGLPQGSPVSPILFLLYVESLL 210
                 44444567779**********************************************************99**************************** PP

                 TT-T......TEEECTTEEEEEESSHHH......HHHHHHHHHHHHHHTT--BEGGG-EEE... CS
       RVT_1 152 relrkrakgvtllrYaDDililskskee......lqelleaveewlkesglkinpeKtklvlft 209
                 r  r       ++ YaDD  i++ +k+       lq  l+   ew  e+g+++   Kt+l +f 
  KHJ34730.1 211 RLSRG------CYGYADDAAIFAAGKTLeecnskLQFQLDRALEWGIENGISFDTLKTELQYFD 268
                 ****8......8*************88888999999999*******************998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       340  (0.0189637); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.19s 00:00:00.62 Elapsed: 00:00:00.36
# Mc/sec: 2342.41
//
Query:       KHJ34731.1  [L=124]
Description: hypothetical protein EV44_g3785 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 903.56
//
Query:       KHJ34732.1  [L=517]
Description: putative endo-beta-glucanase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-10   40.5   0.2    4.4e-10   39.3   0.1    1.7  1  Glyco_hydro_16  Glycosyl hydrolases family 16


Domain annotation for each model (and alignments):
>> Glyco_hydro_16  Glycosyl hydrolases family 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.3   0.1   2.4e-14   4.4e-10      15      91 ..      67     157 ..      54     191 .. 0.73

  Alignments for each domain:
  == domain 1  score: 39.3 bits;  conditional E-value: 2.4e-14
                     EEETTSEEEEEEEE...........EEEEEEEECCEESSEEEEEEEE..---STTEEEEEEEET.GGTSTTEEEEE.EEETT-TTEEEEEEE CS
  Glyco_hydro_16  15 svengetltltldk...........esgsrikskksflyGkvearik..aaksaGvvtafylss.edekahdEiDi.EflGndtgkvqtnvy 91 
                     sv++ +++ + +d            + + r+++kks++yG +  ++   +a++ G ++af++++ ++++ ++EiDi E++ ++++++  +++
      KHJ34732.1  67 SVNDAQQVYIGVDYenvydvnggrgRPSIRLETKKSYQYGLFVFDLAhmPANTCGKWSAFWTTNeQEWPRWGEIDIiENIHENNNTL-EALH 157
                     344446666766667777777777666899**********9999888889************99455*************7766663.3444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (517 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       654  (0.0364772); expected 358.6 (0.02)
Passed bias filter:                      386  (0.0215294); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 3873.31
//
Query:       KHJ34733.1  [L=371]
Description: putative saccharopine dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.8e-29  100.5   0.0    1.3e-28  100.0   0.0    1.3  1  AlaDh_PNT_N  Alanine dehydrogenase/PNT, N-terminal domain
    0.00042   19.7   0.0     0.0013   18.1   0.0    1.7  2  AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain


Domain annotation for each model (and alignments):
>> AlaDh_PNT_N  Alanine dehydrogenase/PNT, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.0   0.0   1.5e-32   1.3e-28       3     136 .]       9     142 ..       7     142 .. 0.93

  Alignments for each domain:
  == domain 1  score: 100.0 bits;  conditional E-value: 1.5e-32
                  ---.SSTT----SS-HHHHHHHHHTT-EEEEETTTTGGGTC-HHHHHHTTEEEES.CHHHHCTTSSEEEESS--.CHCGGGS-TTCEEEEE--GG... CS
  AlaDh_PNT_N   3 pkE.ikagErRvaltPatvkkLvkaGhevlVesgaGegagfsdeeYeeaGaeive.saeevlaeadlilkVkepseeelellkegqtlisflhla... 95 
                  + E  k+ ErR altP+t ++L++aG+ + Ve+++  +++f+d+e+eeaGa++v+ s+++ ++++++i+++ke+  + ++ ++ ++t+i+f+h++   
   KHJ34733.1   9 RSEvGKSLERRSALTPTTTRSLIEAGFIINVERSP--QRIFDDSEFEEAGATLVPeSTWHEAPNDHIIIGLKEL--PVDD-FPLKHTHIQFAHCYkqq 101
                  66756778***************************..*****************9788999*************..6666.99************998 PP

                  .CHHHHHHHHHHCTEEEEEGGG-BSSGCCGGGTHHHHHHHHH CS
  AlaDh_PNT_N  96 .anpellealaekgvtaialElvprisraqsldaLssmaeia 136
                    + ++l+++a++g+t+++lE++++ +++++++a++++a++a
   KHJ34733.1 102 rDWDKVLSRFARGGGTLLDLEFLTD-DNGRRVAAFGYHAGLA 142
                  6699*********************.8************987 PP

>> AlaDh_PNT_C  Alanine dehydrogenase/PNT, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.19   1.7e+03      29      51 ..     194     217 ..     185     219 .. 0.82
   2 !   18.1   0.0   1.4e-07    0.0013      89     200 ..     240     359 ..     230     367 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.19
                  -EEEEEST.SHHHHHHHHHHHHTT CS
  AlaDh_PNT_C  29 akvlviGg.GvaGlqAiatakglg 51 
                   kv++iG+ G  G  A++ + ++g
   KHJ34733.1 194 PKVMIIGAlGRCGSGAVSLCEQVG 217
                  59*****98999999998887766 PP

  == domain 2  score: 18.1 bits;  conditional E-value: 1.4e-07
                  HHH-SEEEE---BTTSS---SC-HHHHHTS.-TTEEEEETTGGGT.......-SBTT--TBBTTSEEE...E..ETTEEEEEBSTGGGGSHHHHHHHH CS
  AlaDh_PNT_C  89 vkeadvvigtvlipGkkaPkLvteemvksM.kpgsVivDvAidqG.......Gnvetsrltthgepvv...e..ekgvvhygvanlpgavprtasall 173
                  v ++d+ + ++ +  +k P+ +++  +++  ++ sV+ Dv++d+              + tt ++p+v   +  e    ++    lp+ vpr+as+++
   KHJ34733.1 240 VLQSDIFVNCIYLS-SKIPNFIDKPSLNNPeRKLSVVCDVSADTTnpynpipIYT---EATTFTNPTVpveVdaEPPLSVISIDHLPSLVPREASEAF 333
                  66778888877664.57888888888887525679999**999653332222222...344444444411131124589******************* PP

                  HHHHHHHHHHHCHHHTCCHHHCTSHHH CS
  AlaDh_PNT_C 174 tnntlpyleelladkglkkalkedeal 200
                  ++ +lp l+ l +++ ++++  + e l
   KHJ34733.1 334 SRDLLPSLLLL-KSRSISSVWARAENL 359
                  *********99.998887776666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (371 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       315  (0.0175693); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2745.39
//
Query:       KHJ34734.1  [L=257]
Description: putative gdsl lipase acylhydrolase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-13   51.0   0.0    2.1e-13   50.7   0.0    1.2  1  Lipase_GDSL    GDSL-like Lipase/Acylhydrolase
    5.1e-13   49.8   0.0    1.1e-11   45.4   0.0    2.3  1  Lipase_GDSL_2  GDSL-like Lipase/Acylhydrolase family


Domain annotation for each model (and alignments):
>> Lipase_GDSL  GDSL-like Lipase/Acylhydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.0   2.4e-17   2.1e-13       3     200 .]       9     243 ..       7     243 .. 0.82

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 2.4e-17
                  EEESHHHH.....TTTHHHHHHHCCCCEECCCTTC.GCEEEEEEECTTHHHHHHHCCHECTTTECHHHHHCTTSEEEEE--CTCC-EECSSCTTTCEE CS
                  xxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Lipase_GDSL   3 afGDSltd.....GdgaatlntiqlktpknlnefdlaldrianignkgasdnelqqllnkyplkseqlkalhpdlviislGtNDsnlgkkstdaakke 95 
                  +fGDSl++      dg+  +n  ++  +  + +++       + g++ +    + +++  +p+ +    ++++  + i++GtND             +
   KHJ34734.1   9 LFGDSLIEranleCDGFQFVNQLENALDGRYEMIA----H-GYPGANTYHALDFLKNV--IPSPE----KAKVRFLAIWFGTNDA------DKSRPVS 89 
                  79****99777775577777777777777777774....3.34444444444444444..35554....77888***********......88899** PP

                  HHHHHHHHHHHHH..HHHHHHHTTEEEEEEE-SSTCH.......CTCCCCHCCHHHHHHHHHHHHHHHHHHHH........................H CS
                  xxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................x RF
  Lipase_GDSL  96 aeeyiknlreaik..elkeegapkaivvlvsppglgp.......qeekdakklgekgnefvgeynqrlndlae........................k 160
                  +e++ knl + i+  +l +++ p + ++l++pp++ +       +++   ++   +++  +++y++++++l++                        k
   KHJ34734.1  90 IENFEKNLISIINspQLCAHL-PDINIILITPPPVEEsllvehkKKKYGLEGPPHLTAASAAQYAKKIQELVQelkstnkeqtiekascqskrenkfK 186
                  ************999999888.******************987655555566677788888899999999999999999999999************* PP

                  CTEEEECHHHHHHHTHCCGCHCH.................TSSSB-HHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxx.................xxxxxxxxxxxxxxxxx RF
  Lipase_GDSL 161 dgfavvDlydelqglsgieqlka.................DglHpsekgyeklaell 200
                   +++v+D++ e+++++++ ++                   Dg+H +++gy+++ +++
   KHJ34734.1 187 RQLEVLDVWGEFISMTEWREGTLpgssilgvdqilselliDGVHLTTAGYKIVLSAF 243
                  ***************66666555*****************************98875 PP

>> Lipase_GDSL_2  GDSL-like Lipase/Acylhydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.0   1.3e-15   1.1e-11       1     179 []       9     238 ..       9     238 .. 0.65

  Alignments for each domain:
  == domain 1  score: 45.4 bits;  conditional E-value: 1.3e-15
                    EEESHHHHTCTTBCCHCHHCCCCCCCHHHTT-EEEEE.EEHCCH-H...HHHHHHHH.CTGGG-TSEEEEE--CCCCCTT--HHHHHHH..HHHHH CS
  Lipase_GDSL_2   1 alGDSiTaGygadgggrsypaylarllaarlgldvvnnlgvsGatt.allrllerlr.dllrlkpdlvtiliGtNDlgrgvpaaaaaandnleeli 94 
                    ++GDS+ +  + ++ g  + + l+++l  r+  + +   g++Ga+t ++l++l+ +  +++++k + + i++GtND++   p++    ++nl ++i
     KHJ34734.1   9 LFGDSLIERANLECDGFQFVNQLENALDGRY--EMIA-HGYPGANTyHALDFLKNVIpSPEKAKVRFLAIWFGTNDADKSRPVSIENFEKNLISII 101
                    59*******9988888888888888888888..4555.********7444444444458888888***********998888888888888***** PP

                    H..HHCCC...GEEE..................CEEEEE-TTT-TTSTCCHHHHHHHHHHHHHHHHHHCT-EEE-H.................... CS
  Lipase_GDSL_2  95 d..alraaapgaril..................vlgplpptpeaaadarelnaviaaynealrevaaeegvpfvDl.................... 150
                    +  +l a+ p++ i+                      ++  ++++  a+++++++++++e+++e+ + ++ + +                      
     KHJ34734.1 102 NspQLCAHLPDINIIlitpppveesllvehkkkK---YGLEGPPHLTAASAAQYAKKIQELVQELKSTNKEQTIEKascqskrenkfkrqlevldv 194
                    ***************9*********999996662...33333333333333333333333333333333333333322244444444444444444 PP

                    HHHHHHCCCCCGGBBTTS.................SSB-HHHHHH CS
  Lipase_GDSL_2 151 hdaladsgerladlladdg................lHPnaaGyrl 179
                    ++ + + +e+  +++ +++                +H++ aGy++
     KHJ34734.1 195 WGEFISMTEWR-EGTLPGSsilgvdqilsellidgVHLTTAGYKI 238
                    55555554333.333333346666666666666669999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (257 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1635  (0.091193); expected 358.6 (0.02)
Passed bias filter:                     1083  (0.0604049); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.31s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 1711.72
//
Query:       KHJ34735.1  [L=1309]
Description: putative nuclear migration protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.2e-40  137.0   0.0    1.1e-39  135.3   0.0    2.0  1  Mcp5_PH          Meiotic cell cortex C-terminal pleckstrin ho
     0.0032   17.9  10.7     0.0032   17.9  10.7    3.7  3  Fez1             Fez1
  ------ inclusion threshold ------
       0.02   15.0  18.1       0.11   12.5  11.2    3.0  2  TPR_MLP1_2       TPR/MLP1/MLP2-like protein
       0.19   12.4   3.4        0.4   11.3   3.4    1.5  1  DUF4398          Domain of unknown function (DUF4398)
        0.8   10.0   5.2       0.49   10.7   1.6    2.5  2  KxDL             Uncharacterized conserved protein
        1.2    8.4   9.9      0.021   14.2   2.3    1.8  2  DUF4407          Domain of unknown function (DUF4407)
        2.4    8.3   8.8         19    5.5   3.9    2.4  2  PEP-utilisers_N  PEP-utilising enzyme, N-terminal


Domain annotation for each model (and alignments):
>> Mcp5_PH  Meiotic cell cortex C-terminal pleckstrin homology
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.3   0.0   4.2e-43   1.1e-39       1     122 []     878    1010 ..     878    1010 .. 0.96

  Alignments for each domain:
  == domain 1  score: 135.3 bits;  conditional E-value: 4.2e-43
     Mcp5_PH    1 svidaiaqtmiGeylyKyvrkrkskg..........ssekrhkryvwihpyertllWsskqPksekakegksks.vaiesvlsvedenplpkglkef 86  
                  svi+aia  miGe++yKyvr+r   g          s++ rhkr+vw++py r+++Wssk+P+s+ a  gk+++ +++++vl+v+denp+pkg + f
  KHJ34735.1  878 SVISAIACGMIGEWVYKYVRHRGPIGvsesaeqpdnSKKVRHKRWVWLAPYDRAVMWSSKEPTSGTALLGKNGRkIIVQTVLDVKDENPAPKGVNLF 974 
                  5899******************55556999*****9999*********************************9989********************* PP

     Mcp5_PH   87 nksililtpdralkltaetrerhevWltaLsyllhk 122 
                  ++silil+p+ralk+ta+t erh  Wl aLs+l+h+
  KHJ34735.1  975 HRSILILSPARALKFTATTMERHFNWLMALSFLAHS 1010
                  *********************************996 PP

>> Fez1  Fez1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9  10.7   1.3e-06    0.0032      52     169 ..      81     196 ..      74     208 .. 0.90
   2 ?    0.1   0.2      0.36   9.3e+02      46     127 ..     344     438 ..     337     480 .. 0.62
   3 ?    3.0   1.0     0.048   1.2e+02      39     109 ..     669     738 ..     647     803 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 1.3e-06
        Fez1  52 eeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsleeeeaalesdeakaqrqeaeeleelkreverlraeLkeerqk 150
                 +ei +l+ +le k++++e +e  l +++ e+e+++  ++++++e ++l+++l+ +++ +++  + s+ +k ++ ++e ++e kr++e+ +++++ +  +
  KHJ34735.1  81 SEILTLRRALEAKKKQIESLETTLYETRGEHEIFSAGLTSISKENHSLKRKLELVEAGTST--ALSELSKDREIARELAQEAKRRLEKAQKKIRSQDGE 177
                 5788999********************************************9997755444..4555567888888999******************** PP

        Fez1 151 keeqassFeqERrtWqeeK 169
                  ++ ++ +++++  W+eeK
  KHJ34735.1 178 IDRVHALWARDKSSWEEEK 196
                 ******************9 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.36
        Fez1  46 kleekeeeikeleesleektlelevcenelqrkkseaellrekvekleeel.....kelreelselsleeeeaalesdeakaqrqe...........a 127
                 ++++ +++i+  +++   k+le     n+++r+ s ++ l+e+v+   +e+     +elr+++ ++ + +++  ++s+e+k++  +            
  KHJ34735.1 344 SIKTLDSKISGEDNNGGAKNLEHLDSGNKISRSLSATSELQENVSLSPKEVlisegHELRNNYLANLSLQDN--SNSHEKKNRV-HsnfsisvqccsI 438
                 567778888888888888999999999999999888888888887666555211114555533332222222..2233322222.2244455444444 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.048
        Fez1  39 qlrelrakleekeeeikeleesleektlelevcenelqrkkseaellrekvekleeelkelreelselsle 109
                 q re +++le++ ++ + l ++ +ek+  +e  + el+ + s+ + l+ +++++ ++++ +r+e s +s +
  KHJ34735.1 669 QRREKQNDLEQSTQRENLLFTNDTEKNIRVESSDLELSGNLSNPDELKTRINQIWSKTE-VRHEQSCASIS 738
                 7899999*****99999999999*****************9999999999999866543.34433333333 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   2.5     0.028        71      51      88 ..      75     112 ..      73     137 .. 0.79
   2 ?   12.5  11.2   4.4e-05      0.11      47     114 ..     144     212 ..     118     216 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.028
  TPR_MLP1_2  51 khaedvkelqalreelnelkaeiaelkaeaesakaele 88 
                 +ha+ v e+ +lr  l+  k++i++l++ + +++ e+e
  KHJ34735.1  75 LHANLVSEILTLRRALEAKKKQIESLETTLYETRGEHE 112
                 89*************************99888876654 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 4.4e-05
  TPR_MLP1_2  47 relvkhaedvkel.qalreelnelkaeiaelkaeaesakaeleeseesweeqkeelekelselekried 114
                 +el k  e ++el q+++ +l++++++i++   e ++++a +++ ++swee+k  +e+++  +e+r++ 
  KHJ34735.1 144 SELSKDREIARELaQEAKRRLEKAQKKIRSQDGEIDRVHALWARDKSSWEEEKRIIERRVHVAENRLKK 212
                 48888888888874689*************************************************986 PP

>> DUF4398  Domain of unknown function (DUF4398)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   3.4   0.00016       0.4      39      72 ..     145     177 ..     123     183 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00016
     DUF4398  39 amaekdyeeAdhlaylAerdaelAearAkaakae 72 
                 +   kd e A++la++A+r+ e+A+ + ++ + e
  KHJ34735.1 145 EL-SKDREIARELAQEAKRRLEKAQKKIRSQDGE 177
                 44.556666******************9998766 PP

>> KxDL  Uncharacterized conserved protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       1.4   3.5e+03      58      78 ..      84     104 ..      77     108 .. 0.82
   2 ?   10.7   1.6   0.00019      0.49      27      74 ..     127     174 ..     118     183 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 1.4
        KxDL  58 kevkkdLesifkkirslkakl 78 
                   +++ Le  +k+i+sl+++l
  KHJ34735.1  84 LTLRRALEAKKKQIESLETTL 104
                 5688999999******99887 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00019
        KxDL  27 kknreLlelnalsqerlaklrarfkqgtkllkevkkdLesifkkirsl 74 
                 + +r+L+ + a +++ l++l+++ +   +l++e k+ Le+ +kkirs 
  KHJ34735.1 127 SLKRKLELVEAGTSTALSELSKDREIARELAQEAKRRLEKAQKKIRSQ 174
                 5567888888889999******************************85 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   2.3   8.1e-06     0.021     136     258 ..      77     192 ..      44     200 .. 0.75
   2 ?   -3.2   0.9       1.6   4.1e+03     143     224 ..     604     682 ..     572     696 .. 0.58

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 8.1e-06
     DUF4407 136 aeleaqiaalqaeidaaearldalraeaqkeldgtk...gtgttgvaGkgpaakekkaqldaaqaelaelkakldatarlaalraelaeleaerakera 231
                 a+l ++i  l+++++a++++++ l++++  e+ g+    +      aG   + ke +  l+++ + +++ +++  a ++l+++r+ + el++e++++ +
  KHJ34735.1  77 ANLVSEILTLRRALEAKKKQIESLETTLY-ETRGEHeifS------AGLTSISKE-NHSLKRKLELVEAGTST--ALSELSKDREIARELAQEAKRRLE 165
                 45666777788888888888888888887.5555332333......333333333.55555555556665666..9*********************** PP

     DUF4407 232 asqaaaaaddGllarlealdrltkeda 258
                 + q++++++dG ++r +al++  k+++
  KHJ34735.1 166 KAQKKIRSQDGEIDRVHALWARDKSSW 192
                 ********************9777766 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.6
     DUF4407 143 aalqaeidaaearldalraeaqkeldgtkgtgttgvaGkgpaakekkaqldaaqaelaelkakldatarlaalraelaelea 224
                 ++ +++ da+  ++++ +++++  ld + + +      +   a++ +++++  +++l +l +++ ++ ++ ++++ l++ ++
  KHJ34735.1 604 SDQSKNEDAKTYEIECSKENLDVTLDKNISPT---LDSNIVGAEKINSENEFTDRDLSDLPRSSLSQPQRREKQNDLEQSTQ 682
                 44445555555555555555555555544433...44455555666666666666666666664444454444444444333 PP

>> PEP-utilisers_N  PEP-utilising enzyme, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.2     0.011        29      28      65 ..      78     116 ..      68     125 .. 0.81
   2 ?    5.5   3.9    0.0072        19      37     102 ..     154     218 ..     119     220 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.011
                      GHHHHHHHHHHHHHHHHHHHHHHHHHH...T-HHHHHHHHH CS
  PEP-utilisers_N  28 dveaelerleeAlekvreelealaeka...lgeeeaaifea 65 
                      +  +e+  l++Ale+ ++++e+l+  +       e +if+a
       KHJ34735.1  78 NLVSEILTLRRALEAKKKQIESLETTLyetR--GEHEIFSA 116
                      56689999***************97778433..35789988 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0072
                      HHHHHHHHHHHHHHHHHH.T-HHHHHHHHHHHHHHT-HHHHHHHHHHHHHHT--HHHHHHHHHHHHH CS
  PEP-utilisers_N  37 eeAlekvreelealaeka.lgeeeaaifeahlmlleDpelleeveerIregglnaeaAveevveefa 102
                      +e  ++++++le++++k+    ++ +i ++h++ ++D++  ee ++ I+ + + ae+ +++ +ee+a
       KHJ34735.1 154 RELAQEAKRRLEKAQKKIrS--QDGEIDRVHALWARDKSSWEEEKRIIERRVHVAENRLKKILEEVA 218
                      33345556666666555541..2366***********************999999999999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1309 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1355  (0.0755759); expected 358.6 (0.02)
Passed bias filter:                      463  (0.0258241); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.85u 0.29s 00:00:01.13 Elapsed: 00:00:00.46
# Mc/sec: 8628.31
//
Query:       KHJ34736.1  [L=651]
Description: putative interferon-induced gtp-binding protein mx [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    9.6e-30  103.8   0.3    2.6e-29  102.4   0.0    1.8  2  Dynamin_N  Dynamin family
    6.6e-25   87.9   0.2    9.2e-24   84.1   0.1    2.4  1  Dynamin_M  Dynamin central region
    0.00019   21.5   0.0     0.0018   18.4   0.0    2.4  1  MMR_HSR1   50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.037   14.1   1.4       0.11   12.6   1.4    1.8  1  TaqI_C     TaqI-like C-terminal specificity domain
      0.056   13.5   0.5       0.18   11.9   0.0    2.1  2  ASL_C      Adenylosuccinate lyase C-terminal
      0.072   13.3   0.0        1.2    9.4   0.0    2.6  2  Roc        Ras of Complex, Roc, domain of DAPkinase


Domain annotation for each model (and alignments):
>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.4   0.0   8.7e-33   2.6e-29       1     167 [.      46     240 ..      46     241 .. 0.86
   2 ?   -1.7   0.1       0.9   2.7e+03      60     101 ..     581     623 ..     557     626 .. 0.45

  Alignments for each domain:
  == domain 1  score: 102.4 bits;  conditional E-value: 8.7e-33
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS---S-EEEEECCT---C...........CS...SSEEEET-EB--CHHHHHHHHHHHHH........HH CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnptTrrplelqlgeeeeas...........eravkeelkekekkledfsevreeieketek........ia 80 
                 i+v+G+qSsGKSSvl+aL++ + +pr+ n++Tr  +e+ l++ e++s            ++++e l+++++ ++df e+ e +++++e         ++
  KHJ34736.1  46 IVVCGDQSSGKSSVLEALTEIP-FPRSDNLCTRYATEIILRRAENSSilikinpddhrPAEEQEMLRNFAETITDFAELPEVMDMAREAmgidselsSN 143
                 89********************.7****************99999889999999877655555566667888888888888888777773333222222 PP

                 TSSSS--SS-EEEEEEETTS-SEEEEE---B-SSSGTTS.........HHHHHHH.STTEEEEEEEETTS-CCC-CHHHHHHHHSTTBTTEEEEEE- CS
   Dynamin_N  81 gankgiskkvillkilsllvkgltlvDlPGldsvnkrdq.........elvkeyi.kkadiilavtsanhdlsnsealflarevdpkgkrtivvltk 167
                   ++++s++v+++++ ++ v++ltlvD PGl+ +++            e+++ yi ++++i lav sa +d +n+      r++dp g+rt++v+tk
  KHJ34736.1 144 PGCNAFSRDVLSITMEGPEVPQLTLVDIPGLIANATLGIsdadvemvgEITNYYIsQSRTICLAVISATNDYANQSIVTRIRKYDPLGDRTLGVITK 240
                 255555555************************999888999******************************************************9 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.9
                 -EB--CHHHHHHHHHHHHHHHTSSSS--SS............-EEEEEEETTS- CS
   Dynamin_N  60 kkledfsevreeieketekiagankgiskk............villkilsllvk 101
                 k++   +e+++++ k++e           +            ++++++ +++++
  KHJ34736.1 581 KRQIRQQELEKKYVKREE-----------NnddnpvhnfvydPETMEPEKFTCD 623
                 222222222222222222...........0222222333444777776666665 PP

>> Dynamin_M  Dynamin central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.1   0.1   3.1e-27   9.2e-24       3     227 ..     256     526 ..     254     583 .. 0.87

  Alignments for each domain:
  == domain 1  score: 84.1 bits;  conditional E-value: 3.1e-27
   Dynamin_M   3 dilenkvipLklGYvgVvnRsqkdInkkksieealkkEkaFFeshpayrkl.adkaGtpyLakkLnqiLvehIrkslPelkkkineklqklekeleelg 100
                 ++++n++i+ klG+ +V+nRs+++  ++ s+ ++  +E+ ++++   ++ l +++ G+  L k+L+++L+eh++ +lP+l+++++++l+ ++++l+++g
  KHJ34736.1 256 NLARNQDINYKLGWHIVKNRSHAE--ADDSLVQRNISESTWLRNS-NFNVLgQENLGIGSLRKRLSKLLFEHVKLELPKLRQELESRLKGYKQDLAAMG 351
                 7899********************..6889**************9.778888*********************************************** PP

   Dynamin_M 101 eskpsdeektklllqlitkfkedfkklieGe..se.vstke................lsggar.ireiFnetle....kslekidpleelsd....... 168
                 es+ + +e +++l+ l +++ e   ++++G+  +e  + ++                ++   + i+  F+e+++    k   +id+   lsd       
  KHJ34736.1 352 ESRATPSECRSFLIALSQDIREVCVNAVNGHyqNEfFT-QKselincgtdvdlpitrVRAVVQcINTSFAEHFKtyghKYQFSIDNHGFLSDddpkvpp 449
                 9998877***********************97533422.2234888888899999885555545*******7774444444446666666668999*** PP

   Dynamin_M 169 .................eeirtairnsrGrelplfvpekaFealvkkqikkleepalkcvelVyeelekivek.lek 227
                                  ++i+ ai+n rG el + +++     l+ +q +k++   ++++e+++e+ +k++++ +++
  KHJ34736.1 450 skswieapigmnksatmKWISIAINNGRGHELLGNFNPLLVGELFWEQSSKWKILGQDHIENIFEKCTKFLRTlIQE 526
                 ***********************************************************************996555 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   0.0   5.9e-07    0.0018       1      93 [.      45     218 ..      45     240 .. 0.75

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 5.9e-07
                 EEEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEE.................................................... CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgke.................................................... 47 
                 ++++ G   +GKS+++ alt+     s  + +Tr  +e+ ++  +++                                                    
  KHJ34736.1  45 QIVVCGDQSSGKSSVLEALTEIPFPRS-DNLCTRYATEIILRRAENSsilikinpddhrpaeeqemlrnfaetitdfaelpevmdmareamgidselss 142
                 5899****************9655444.4567888888877733323577777777888899999999999**************************** PP

                 .......................EEEEECGGCS.......SHHHHHH..HHHHHHHHHHCTSEEEEEEETTTTCSHHH CS
    MMR_HSR1  48 .......................ielvDtpGli.......egaseek..glgkaflaleeadlillvvdaseeklkpl 93 
                                        ++lvD+pGli       ++a+ e   ++++ + +     + l v++a+ ++++++
  KHJ34736.1 143 npgcnafsrdvlsitmegpevpqLTLVDIPGLIanatlgiSDADVEMvgEITNYYISQS-RTICLAVISAT-NDYANQ 218
                 *******************************9743333223555555633444444433.37788888876.446544 PP

>> TaqI_C  TaqI-like C-terminal specificity domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.4   3.5e-05      0.11       7      71 ..     561     648 ..     560     651 .] 0.75

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.5e-05
      TaqI_C   7 kdikrysieikgnYldlikkklkneka...kelfe....................ekpKilvrdiskkldaaydekayyvlntlylli 71 
                 +d+kr+ i+++++Y+++i+kk + +++   k++ +                    e +K  + +i ++l a+y  ++++++ ++ + i
  KHJ34736.1 561 RDLKRFPINYNSEYVKYIQKKRQIRQQeleKKYVKreennddnpvhnfvydpetmEPEKFTCDEIFSSLLAIYKVSQFFTSYQISISI 648
                 69*******************9999955543333345555555555555566666699999999999999999999999887777666 PP

>> ASL_C  Adenylosuccinate lyase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   6.1e-05      0.18       2      44 ..     284     327 ..     283     340 .. 0.84
   2 ?   -1.7   0.1      0.98   2.9e+03      65      91 ..     565     591 ..     550     611 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 6.1e-05
                 STT--TCHHHHHTTCHH.HHHHHHHHHHHHHHHHCCEEE-HHHH CS
       ASL_C   2 rlQRDLtdStvlRnlgv.alahslialksllkglsklevneeal 44 
                  +QR +++St lRn     l++  +++ sl k lskl +++ +l
  KHJ34736.1 284 LVQRNISESTWLRNSNFnVLGQENLGIGSLRKRLSKLLFEHVKL 327
                 68************986269****************99877655 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.98
                 HTT-TTHHHHHHHHHTTS---HHHHHH CS
       ASL_C  65 regiekpYeklkeltrgkkitkeslke 91 
                 r  i+   e +k ++++++i++++l++
  KHJ34736.1 565 RFPINYNSEYVKYIQKKRQIRQQELEK 591
                 555555567788888888888888864 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0    0.0004       1.2       2      27 ..      46      71 ..      45      93 .. 0.84
   2 ?    0.8   0.0      0.18   5.5e+02      67     107 ..     188     229 ..     179     243 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0004
                EEEESSTTSSHHHHHHCHCT-CCC-E CS
         Roc  2 vvlvGdsgvGKtsllkrfvedkfsek 27
                +v++Gd+++GK+s l+ ++e  f ++
  KHJ34736.1 46 IVVCGDQSSGKSSVLEALTEIPFPRS 71
                89***************998777655 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.18
                 GCTTTT-HHHHCTSCEEEE.EEEGHHHHCHHHHHHHHHHHCS CS
         Roc  67 erfrslhplylreaalail.vydsrssenlkeWlkelkkvag 107
                 e + +++++y++++  ++l v+ ++++   ++ ++ ++k+ +
  KHJ34736.1 188 EMVGEITNYYISQSRTICLaVISATNDYANQSIVTRIRKYDP 229
                 667789999*99877665516666666667778888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (651 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       920  (0.0513135); expected 358.6 (0.02)
Passed bias filter:                      589  (0.0328518); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 4408.96
//
Query:       KHJ34737.1  [L=326]
Description: putative transaldolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.7e-91  305.9   0.3    3.1e-91  305.7   0.3    1.0  1  TAL_FSA    Transaldolase/Fructose-6-phosphate aldolase
  ------ inclusion threshold ------
      0.051   13.1   0.0      0.099   12.1   0.0    1.4  1  C5-epim_C  D-glucuronyl C5-epimerase C-terminus


Domain annotation for each model (and alignments):
>> TAL_FSA  Transaldolase/Fructose-6-phosphate aldolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  305.7   0.3   3.4e-95   3.1e-91       1     284 [.      15     315 ..      15     318 .. 0.95

  Alignments for each domain:
  == domain 1  score: 305.7 bits;  conditional E-value: 3.4e-95
                 EEEE---HHHHHHHHHTT---EEE--HHHHHH..T...TS.-HHHHHHHHHHH............................H-S-EEEE-S-...-SHH CS
     TAL_FSA   1 lvlDtadrelikklleekgiqgvTtNPsliekaik...ykalydeaieeikkeg....kkvkeaydkLavedilealdllgadgrvslEVdarlsddte 92 
                 +v+D++d+e+i k+++    q++TtNPsli++a k   y++l+d ai+++k++g    +kv++ +d+L ve+++e+l+++  +grvs+EVda +s++ +
  KHJ34737.1  15 IVCDSGDFESIGKYKP----QDATTNPSLILAATKkpgYSKLIDIAIAYGKEKGgsinEKVDATLDRLLVEFGKEILNVV--PGRVSTEVDAAFSFSIQ 107
                 79**************....*************************************9**********************..***************** PP

                 HHHHHHHHHHTT-T.......TEEEEEESSHHHHHHHHHHHHT.T--EEEEEE-SHHHHHHHHHHT-SEEEEBHHHHHTTT............S-HHHH CS
     TAL_FSA  93 atieeArrlialye.....renvlIKiPateeGikAikeLkke.GinvnvTliFsleqalaaaeagasviSpFvgRiddllkkleekdklkgkddgval 185
                 +++e+A ++i+lye     ++++lIKi++t+eGi+A++ L+++  invn+Tl+Fs  qa+aaaea   +iSpFvgRi+d++k++++k+++k++d+gv++
  KHJ34737.1 108 GSVEKALHIIKLYEsigidKSRILIKIASTWEGIQAARILQRDhAINVNLTLMFSQVQAIAAAEADTFLISPFVGRILDWYKAKTGKTYSKEEDPGVQS 206
                 *****************************************6527****************************************************** PP

                 HHHHHHHHHHHT-S-EEEEBS--SHHHHHHHHT-SEEEE-HHHHHHHT--HHH.........................................HHHHH CS
     TAL_FSA 186 vkeiynyykklgysTkvmaasfrnveeveelagcdtvTippkllealakhgkt.....s.ekleeeeiek....lleklfrlginedavaeelldegik 274
                 vkei+nyykk+gysT vm+asfrnv e++elagcd +Ti+p+lle l+++++      + +++ + +iek     +e  fr+++ned++a+e+l+egi 
  KHJ34737.1 207 VKEIFNYYKKFGYSTIVMGASFRNVGEITELAGCDYLTISPNLLEILSTSKEIvtkklDvSSASALQIEKksyiNDEPSFRFDFNEDQMAVEKLREGIS 305
                 **************************************************9997776633444446666677789999********************* PP

                 HHHHHHHHHH CS
     TAL_FSA 275 kFakdlekll 284
                 kFa+d+ +l 
  KHJ34737.1 306 KFAADAIELK 315
                 *****98876 PP

>> C5-epim_C  D-glucuronyl C5-epimerase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   1.1e-05     0.099     103     174 ..     184     257 ..     174     266 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1.1e-05
   C5-epim_C 103 Lydlstakkseeakelfkkglkslkallpkydt.gswslYdlrhvt.lgkapnlarwdYhklhiellkaLakit 174
                 + d+++ak  +++++  + g++s+k++ ++y   g  ++ + + +  +g++ +la  dY ++  +ll++L++ +
  KHJ34737.1 184 ILDWYKAKTGKTYSKEEDPGVQSVKEIFNYYKKfGYSTIVMGASFRnVGEITELAGCDYLTISPNLLEILSTSK 257
                 6799999999*********************988*****99999999**********************99765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.37
# Mc/sec: 2613.85
//
Query:       KHJ34738.1  [L=1599]
Description: putative rho1 guanine nucleotide exchange factor 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-70  236.5   0.0    7.1e-70  235.7   0.0    1.3  1  CNH       CNH domain
    1.6e-28  100.2   1.1    3.6e-28   99.0   0.3    2.1  2  RhoGEF    RhoGEF domain
    1.4e-10   41.4   0.0    1.4e-09   38.2   0.0    2.6  2  PH_5      Pleckstrin homology domain
    0.00013   21.8   0.1          1    9.2   0.0    3.1  3  PH_13     Pleckstrin homology domain
     0.0053   17.3   0.0       0.13   12.8   0.0    3.0  2  PH        PH domain
     0.0087   15.9   0.1        4.7    7.1   0.0    2.6  2  PH_16     PH domain


Domain annotation for each model (and alignments):
>> CNH  CNH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  235.7   0.0   2.4e-73   7.1e-70       4     274 ..    1260    1550 ..    1257    1551 .. 0.97

  Alignments for each domain:
  == domain 1  score: 235.7 bits;  conditional E-value: 2.4e-73
         CNH    4 itggqrlllGteeGlyllnlsdeskpvkieklssvtqlaVleelnlllllsdkqLyvydlsaLeekeeesqlakkksenltqklpetkgchffairn 100 
                  ++g+ ++++G ++G++++  +d++++++ + +s+vtq+aVlee++++l+++dk L++y+l+ + + +e s + ++  ++++ kl+ t++++ffa  +
  KHJ34738.1 1260 FYGKTIVAIGSDNGVFVSAERDPRGWTRSIMVSRVTQIAVLEEFSICLIIADKALIAYSLDMVMPNSEFSVPPQESVRRAPMKLSGTRDVSFFA--T 1354
                  578899*************************************************************999555566678***************..* PP

         CNH  101 gyskekfLvvavks.....kivllewneplkkfk................kklrefqvpaevfsisvlkpklcvgvakgFelvnldegaaeslldpe 176 
                   ++k+++L++++k+     ++++le++ +++++k                + ++ef++p+e++si+++++++++++ kgFel++ld++ ++s++d +
  KHJ34738.1 1355 SRMKNRTLIFYKKReglhsTFKVLEPVFQKSSEKksrllgrirggstdffRAYDEFYIPTECYSINIFHSYIAISTLKGFELMTLDKKLPMSIPDTK 1451
                  ******************************9999*************************************************************** PP

         CNH  177 dns.ldfaarkenlkplaviqisedefLlcydefavyvdlqGrrsrdseleWegkPesvaclepyllafhknfieirsvetgelvqeisgkklrfll 272 
                  d+  +++ ar + l+pl+++++s+ efLlcy+e++vy d++G+ sr+ ++e+ gk+++ a++  yl+ f+++fie+r++++g+l+q+isgk++++l+
  KHJ34738.1 1452 DPAiASVTARISGLRPLGMFRLSNVEFLLCYEECGVYIDKHGDVSRSVIMEFVGKAKNAAMYGAYLVLFDTDFIEVRNADNGRLRQVISGKDIKCLD 1548
                  ****9999***************99***********************************************************************9 PP

         CNH  273 sg 274 
                  sg
  KHJ34738.1 1549 SG 1550
                  86 PP

>> RhoGEF  RhoGEF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.0   0.3   1.2e-31   3.6e-28       2     181 ..     785     969 ..     784     970 .. 0.93
   2 ?   -2.1   0.0       1.3     4e+03      82     124 ..    1152    1194 ..    1122    1199 .. 0.79

  Alignments for each domain:
  == domain 1  score: 99.0 bits;  conditional E-value: 1.2e-31
                 HHHHHHHHHHHHHHHHHHHHHTHCCCHHCT..CCHHHHHH....HHCTTHHHHHHHHHHHHHHHHHHHH.HHHTTSS-S-SHHHHHHHHSTHHH.HHHH CS
      RhoGEF   2 ikElleTErsYvrdLkvlvevylkplsele..vlseeeik....iiFsnieeilelhrsflleeLeerlkeseeqkeaqsigdvflkfadkfkk.YseY 93 
                 ++E++ +E  Y+ + +vl   y++ ls+ e  ++ +e+++     +F++++ i ++++s ll +L+ r+  +e+  +++ ++d+f+++++k k  Y eY
  KHJ34738.1 785 LHEIVMSEDLYMDQINVLRVLYRDELSSWEpsIIAKEKLSkfvsAVFGKVQAIKAVNESYLLAQLKYRQ--KEQGPWITGFSDIFREWIRKAKLiYIEY 881
                 69*********************9999887987777777756657************9999*******9..5899999***********998866**** PP

                 HHCHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGTT--HHHHTTHHHHHHHHHHHHHHHHHHTS-TTSHHHHHHHHHHHHHHHHHHHH CS
      RhoGEF  94 csnypnalkllkelskknkkfkafleeaeerpecskldLeslLikPvqRlprYpLLLkellkntpeshpdyealkkaleaikevasei 181
                  + +p+a  l++++ ++n  f++fl++a+ ++  ++ld +++L  P+ Rl rY LLL ++l n+ ++++++++l  a+e+ik v+ e+
  KHJ34738.1 882 AAGFPHACYLVRREADRNLLFRQFLDQARDNKLSGRLDWNTYLKAPITRLQRYSLLLGTVLSNMTQESEEKSNLILAIEEIKAVTLEC 969
                 *************9999999***************************************************************98776 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.3
                  HHHSTHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHTS CS
      RhoGEF   82 kfadkfkkYseYcsnypnalkllkelskknkkfkafleeaeer 124 
                  k++ k + Y+ Y    +n ++ +++ ++ + +f+a l+e +++
  KHJ34738.1 1152 KHLGKAEVYTLYAPSAQNRMEWCDKILQAKIQFTASLHEQNAE 1194
                  44445556999**************988888898888886554 PP

>> PH_5  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.2   3.4e+03      46      89 ..     472     517 ..     470     525 .. 0.75
   2 !   38.2   0.0   4.7e-13   1.4e-09       1     134 [.    1009    1180 ..    1009    1181 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.2
        PH_5  46 yrrPi.PLeLLvvseaedvpkkkglkkrk.ssslikkkksssnlvl 89 
                 y rP+ P++LL  ++++ ++  +  ++ +  +sli++k s+++++l
  KHJ34738.1 472 YERPLpPIPLLDDKTIQGMILGQHQRNWNiENSLIPNKDSQNKSSL 517
                 8889845899999999999988655444434999999998888765 PP

  == domain 2  score: 38.2 bits;  conditional E-value: 4.7e-13
        PH_5    1 lifkgtlkkketsksesadiqvyLfDhalLlvkiktv......nkreqykvyrrPiPLeLLvvseaedvpkkkgl...........kkrks...... 74  
                  lif+g l + ++++ +  + ++ L+D++l+l k+ +        k+e y v + PiP++LL++ ++ d p  k++                      
  KHJ34738.1 1009 LIFQGDLLRVGANRFTWLETHAILLDNYLVLAKTIAKgdsiygRKKEGYDVSKHPIPMQLLILESTTDDPVIKSSvkgitavaktgP---Inainlg 1102
                  799999999999997777***************864422222279******************988887777776466666555550...0555566 PP

        PH_5   75 ...................sslikkkksssnlvlvpekaekkkgyaitflhlGkkgyeltLyastlaarqkwlekiekq 134 
                                     s++++++ ss   +l  +++++  +y++ ++hlGk++   tLya+++++r +w +ki ++
  KHJ34738.1 1103 qsrstwdvaernialeftsSNQSTTQLSSIPRTLSISETDTRLMYPFRVKHLGKAEV-YTLYAPSAQNRMEWCDKILQA 1180
                  6666679999999998865444444444444455566778899***********987.59****************875 PP

>> PH_13  Pleckstrin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.87   2.6e+03      77     124 ..     931     978 ..     925     990 .. 0.73
   2 !    8.8   0.0   0.00044       1.3      22     125 ..    1007    1108 ..    1001    1136 .. 0.82
   3 !    9.2   0.0   0.00034         1     103     143 ..    1149    1191 ..    1133    1201 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.87
                 E-SS-EETTSEEEE--SSS-.----EEEEEESSEEEEEEES.SHHHHHH CS
       PH_13  77 lYkkpiflnevlvkkpsdksdssekvlklsdidkvitlkae.sanersa 124
                 l +  ++l +vl + +++++++s+ +l +++i+ v tl+ + ++ e ++
  KHJ34738.1 931 LQRYSLLLGTVLSNMTQESEEKSNLILAIEEIKAV-TLECDtKVDENTK 978
                 66778889999999999999999999999999875.4554404445554 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00044
                  --EEEEEEEEETTT--....EEEEEEESSEEEEEEEE----.-------S-SS--EEEEE-SS-EETTSEEEE--SSS-.----EEEEEESSEEEEE CS
       PH_13   22 RkllhsGklyKaksnK....ElvgFLfNDFlLltqpvkklsvssaqeklfesksnaqfklYkkpiflnevlvkkpsdksdssekvlklsdidkvitl 114 
                  Rkl++ G l ++ +n+    E ++ L  ++l+l++++       a+  ++  +++  + + k+pi ++ +++++++d+   +++v  ++++ k+  +
  KHJ34738.1 1007 RKLIFQGDLLRVGANRftwlETHAILLDNYLVLAKTI-------AKGDSIYGRKKEGYDVSKHPIPMQLLILESTTDDPVIKSSVKGITAVAKTGPI 1096
                  9************998777789999999999999886.......2344455555899********************99999999999999999888 PP

                  EESSH.HHHHHH CS
       PH_13  115 kaesa.nersaW 125 
                  +a +  ++rs+W
  KHJ34738.1 1097 NAINLgQSRSTW 1108
                  887762456777 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00034
                  EEEEES..SEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTX CS
       PH_13  103 lklsdi..dkvitlkaesanersaWvkkikeAsekyietekkk 143 
                  +++++    +v+tl a+sa++r +W  ki +A+ ++    +++
  KHJ34738.1 1149 FRVKHLgkAEVYTLYAPSAQNRMEWCDKILQAKIQFTASLHEQ 1191
                  55666511458************************98765554 PP

>> PH  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.8   0.0   4.4e-05      0.13      53     103 ..    1136    1180 ..    1009    1181 .. 0.70
   2 ?   -3.3   0.0       4.2   1.3e+04      22      75 ..    1516    1575 ..    1513    1586 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.4e-05
                  EEEEEEECTTSSSSTSEEEEEESTSSSTEEEEEEESSHHHHHHHHHHHHHH CS
          PH   53 cevvevvatedpkrkfcfelriverngsrtyllqasseeerkeWikaiqsa 103 
                  ++++e+    d+   + f++++   ++ ++y+l+a+s++ r eW+  i +a
  KHJ34738.1 1136 LSISET----DTRLMYPFRVKHL--GKAEVYTLYAPSAQNRMEWCDKILQA 1180
                  222222....5555566666555..778******************99776 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 4.2
                  EEEEETTEEEEESSTTCTTESSEEEEEESTTEEEEEEEC.........TTSSSSTSEEEEEES CS
          PH   22 wfvLkdsellyykndksekdkepkgsislsncevvevva.........tedpkrkfcfelriv 75  
                  ++vL+d++++  +n     + +++ +is +++++ + +           e++kr  +f++ ++
  KHJ34738.1 1516 YLVLFDTDFIEVRNA---DNGRLRQVISGKDIKCLDSGVsplgtgatlAEMEKRTLKFVMAHP 1575
                  677777776666666...788899999999999988776777777776667777777776555 PP

>> PH_16  PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.1   0.0    0.0016       4.7       9      49 ..    1001    1042 ..     998    1071 .. 0.80
   2 !    5.9   0.0    0.0035        11      99     123 ..    1156    1180 ..    1140    1182 .. 0.86

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0016
       PH_16    9 kldltkrkLiheGpltwrlakg.klvdlhvvlledvlvllqk 49  
                  +ld + rkLi++G+l    a++ + ++ h++ll++ lvl ++
  KHJ34738.1 1001 NLDHLGRKLIFQGDLLRVGANRfTWLETHAILLDNYLVLAKT 1042
                  566778********864444333889************9874 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0035
       PH_16   99 gpqmyelvastkeerktWlklisea 123 
                  ++++y l+a+++++r  W+  i +a
  KHJ34738.1 1156 KAEVYTLYAPSAQNRMEWCDKILQA 1180
                  799****************999765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1599 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       579  (0.032294); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.94u 0.32s 00:00:01.26 Elapsed: 00:00:00.49
# Mc/sec: 9816.67
//
Query:       KHJ34739.1  [L=224]
Description: putative isy1-like splicing family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-83  280.1   0.7      2e-83  279.9   0.7    1.0  1  Isy1      Isy1-like splicing family


Domain annotation for each model (and alignments):
>> Isy1  Isy1-like splicing family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  279.9   0.7   1.1e-87     2e-83       1     191 [.       1     196 [.       1     210 [. 0.94

  Alignments for each domain:
  == domain 1  score: 279.9 bits;  conditional E-value: 1.1e-87
        Isy1   1 MaRneEKaqsmLnRfreakaeekgllekkr.rRPklasevkslkeaekwrrqvirEIsrkvakIqdaglgeyqiRdlNDeiNkLlrekrhWekrIkeLg 98 
                 MaRn+EKaqsmL+Rfre +a+++g+++ +r rRPk+++ev+ ++ +ekwr+qv++EIsrkv+kIq+ +l+++ iRdlNDeiNkL+rek++We++I++Lg
  KHJ34739.1   1 MARNSEKAQSMLFRFRESQAADLGIIDVGRtRRPKMITEVTAIPACEKWRGQVLKEISRKVSKIQEVSLSDFMIRDLNDEINKLMREKHMWEVQIRNLG 99 
                 9***************************999******************************************************************** PP

        Isy1  99 Gpdykrkapkmldeegkevpgk.kgyrYFGrAkeLPgVkelfekekkkee..kkkkeraelfknidadYYGy.rdeedgvlleleaeaekeareeav 191
                 Gp+y+r + k++deeg+e+pg+ kgyrYFGrA+eLPgVke+fe+++++ +  k+ + r + ++++da+Y+Gy rde+dg+ll++e+ +e+ea+++  
  KHJ34739.1 100 GPNYMRGGGKVYDEEGREIPGSgKGYRYFGRARELPGVKEMFEAAANSLKpeKPLEARSDFRNKVDASYFGYnRDEDDGTLLKYEKLRENEAFKNVE 196
                 *********************99**********************9544433777799999***********6677789************998755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      410  (0.022868); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1722.74
//
Query:       KHJ34740.1  [L=485]
Description: putative carbohydrate esterase family 5 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-38  132.2   0.0    2.8e-38  131.7   0.0    1.2  1  Cutinase  Cutinase
    2.8e-05   24.1   0.0    0.00077   19.4   0.0    2.2  2  VirJ      Bacterial virulence protein (VirJ)


Domain annotation for each model (and alignments):
>> Cutinase  Cutinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.7   0.0   3.1e-42   2.8e-38       2     177 ..      93     268 ..      92     269 .. 0.93

  Alignments for each domain:
  == domain 1  score: 131.7 bits;  conditional E-value: 3.1e-42
                 --SEEEEEE--TT--TTT.SSHHHHHHHHHHHH.TTT-EEEEE------CGG.......STTSS-HHHHHHHHHHHHHHHHH-TT-EEEEEEETHHHHH CS
    Cutinase   2 ckdvevifArgttepggl.gsvGeavvsalesavgsksvavqgvnYpAdleq.......lyegseeagakeaaalvqslaskCPdtkivlgGYSqGaqv 92 
                 c++v vi+Arg +epg+l + +G+ +++a+ ++v +++va+qgvnYp ++ +          +   ++ake+a+++++  +kCPd +++++GYS G+qv
  KHJ34740.1  93 CSSVGVIYARGLSEPGNLgILTGPPFFDAIDNKVENEDVAIQGVNYPDSKPSdevegspEAVKVPPEAAKELARIITESRNKCPDMHLIVSGYSEGSQV 191
                 9*****************8899*************************99998877775544556689******************************** PP

                 HHHHHTT.....S-HHHHHHEEEEEEES-TTCCCCTTS-TTS-GGGEEEE--TT-GGG.TS----GGGG-GGGG.HHHHHHHHHHH CS
    Cutinase  93 idnaieggatatlpaavadkvaavvlfGdpsnvaglpevsklyaskikslCdagDpiC.gsgneleaHlsYvseyttqaakFvvsk 177
                 +++a+ +     l++++ + + a+++fGdp ++ +++++++    k+ ++C++gD+iC g+    ++Hl+Y ++ +++aa+F+v+ 
  KHJ34740.1 192 VHEATDQ-----LSPEISNGIGAIIMFGDPMKGTPIKNYDA---KKVLTVCHDGDVICdGKPEVRPPHLTYSQD-ANDAAEFAVKT 268
                 *******.....***********************999988...9*************888888899*******.9******9985 PP

>> VirJ  Bacterial virulence protein (VirJ)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   0.0     0.016   1.4e+02     138     164 ..      26      52 ..      17      75 .. 0.78
   2 !   19.4   0.0   8.6e-08   0.00077      45     104 ..     155     214 ..     153     220 .. 0.93

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.016
        VirJ 138 akrvvCiyGkdekdeacpelkakgvev 164
                     +C+ G+++ d++c +l  ++  v
  KHJ34740.1  26 LLVSTCVQGQKDVDSKCKNLGPNSNSV 52 
                 55678************9987776655 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 8.6e-08
        VirJ  45 rtPeevaaDldrlikkyakrwkkkkvvliGysfGaDvlPaaynkLkaatrdkvklvslla 104
                 + P e+a++l+r+i++ +++    ++++ Gys G+ v+  a ++L+++  + + ++ +++
  KHJ34740.1 155 KVPPEAAKELARIITESRNKCPDMHLIVSGYSEGSQVVHEATDQLSPEISNGIGAIIMFG 214
                 67999*******************************************999998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       644  (0.0359195); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.43
# Mc/sec: 3348.93
//
Query:       KHJ34741.1  [L=345]
Description: putative peripheral gtpase of the mitochondrial inner membrane [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.9e-15   54.6   0.0    2.2e-14   53.5   0.0    1.6  1  MMR_HSR1     50S ribosome-binding GTPase
    8.4e-06   25.4   0.0    2.6e-05   23.8   0.0    1.8  2  FeoB_N       Ferrous iron transport protein B
    9.8e-06   25.7   0.3      0.057   13.5   0.3    2.9  2  Dynamin_N    Dynamin family
    7.5e-05   22.7   0.1    0.00018   21.5   0.1    1.6  1  RsgA_GTPase  RsgA GTPase
    0.00086   18.7   0.0     0.0017   17.7   0.0    1.5  1  AIG1         AIG1 family
     0.0018   17.4   0.0     0.0029   16.7   0.0    1.3  1  IIGP         Interferon-inducible GTPase (IIGP)
     0.0038   16.6   0.0     0.0068   15.7   0.0    1.3  1  Septin       Septin
     0.0042   17.3   0.0     0.0098   16.1   0.0    1.7  1  Roc          Ras of Complex, Roc, domain of DAPkinase
     0.0079   16.7   0.9       0.02   15.4   0.1    2.1  3  AAA_18       AAA domain
  ------ inclusion threshold ------
      0.025   15.0   0.0      0.044   14.2   0.0    1.4  1  AAA_16       AAA ATPase domain
      0.041   13.3   0.0      0.099   12.1   0.0    1.6  1  SRPRB        Signal recognition particle receptor beta subuni
       0.11   12.8   0.4        8.8    6.6   0.0    2.5  3  AAA_22       AAA domain
       0.16   12.4   0.0       0.45   11.0   0.0    1.7  1  DUF1636      Protein of unknown function (DUF1636)


Domain annotation for each model (and alignments):
>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.5   0.0   1.6e-17   2.2e-14       1      86 [.     133     241 ..     133     277 .. 0.64

  Alignments for each domain:
  == domain 1  score: 53.5 bits;  conditional E-value: 1.6e-17
                 EEEEEESTTSSHHHHHHHHHT.....S.TEEESSSTTSSSSEEEEEEE......ETT.EEEEEEECGGCS.....SHHHHHH.......HHHHHHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltg.....e.kaivsdkpgtTrdinegrvk......lkg.keielvDtpGli.....egaseek.......glgkaflale 74 
                 ++++vG+pNvGKS+L+n+l +     + +a ++++pg Tr+i  g vk      +k+ + ++lvDtpG++     +  se+        ++++++ +  
  KHJ34741.1 133 RILVVGMPNVGKSSLLNSLRKsgvkrSkAAATGAQPGITRKIASG-VKivdrnaEKKlEGVYLVDTPGVFmpyvsD--SESMlklalvgSVKDTIISPV 228
                 689****************9755544236899**********998.44334544223355********75433321..222111322222333333333 PP

                 C.TSEEEEEEETT CS
    MMR_HSR1  75 e.adlillvvdas 86 
                   +d +l++++ +
  KHJ34741.1 229 TlCDYLLFMLNQQ 241
                 3578888888744 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       4.1   5.7e+03      52      65 ..      14      27 ..      14      45 .. 0.68
   2 !   23.8   0.0   1.9e-08   2.6e-05       2      83 ..     133     225 ..     132     232 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 4.1
                EE----SSSSSSSH CS
      FeoB_N 52 vDlPGiYslsayse 65
                vDlP +Y l ++++
  KHJ34741.1 14 VDLPRTYFLGHHAS 27
                69999998865544 PP

  == domain 2  score: 23.8 bits;  conditional E-value: 1.9e-08
                 EEEEEESTTSSHHHHHHHHHTT..S....EEEEESTTSSSEEEEEEEEE......TTEEEEEEE----SSSSSSSHHHHHHHHHHHCTSSSEEE CS
      FeoB_N   2 tvalvGnpnvGkttlfnaltga..k....qkvgNwpGvtvekkegklkl......kgkeveivDlPGiYslsayseeekvardflleeepdvvv 83 
                 ++ +vG pnvGk++l+n+l ++  k       g  pG+t + ++g   +      k + v +vD PG++ +  +s  e++ +  l+ +  d+++
  KHJ34741.1 133 RILVVGMPNVGKSSLLNSLRKSgvKrskaAATGAQPGITRKIASGVKIVdrnaekKLEGVYLVDTPGVF-MPYVSDSESMLKLALVGSVKDTII 225
                 6899***************765222222256899*****8887775433222221336789*******9.567888888888888888888887 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.3   4.2e-05     0.057       1      27 [.     134     160 ..     134     176 .. 0.79
   2 !    9.6   0.0   0.00064      0.88      90     120 ..     179     229 ..     154     275 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 4.2e-05
                 EEEEEBTTTTHHHHHHHHHTS--S--- CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprg 27 
                 i+vvG+ + GKSS+ln+L ++ +  ++
  KHJ34741.1 134 ILVVGMPNVGKSSLLNSLRKSGVKRSK 160
                 89****************888765444 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 0.00064
                 -EEEEEEETTS-SEEEEE---B-SSSGTTS....................H CS
   Dynamin_N  90 villkilsllvkgltlvDlPGldsvnkrdq....................e 120
                  i+ ++ + + +g+ lvD+PG+    + d                      
  KHJ34741.1 179 KIVDRNAEKKLEGVYLVDTPGVFMPYVSDSesmlklalvgsvkdtiispvT 229
                 566667788889***********9999998766666666655544444440 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.1   1.3e-07   0.00018      48     161 ..      67     200 ..      47     205 .. 0.68

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 1.3e-07
                  EEEEEEE-GGG--HHH.HHHHHHHHHHHTT..SEEEE--TTTHTTHHHHHHHCTT...SE.......EEEECSTTSSHHHHHHHHCTT........-- CS
  RsgA_GTPase  48 epvivlnKiDlleeee.eleelkeelealg..yevllvsaktkegleelkellkd...kt.......svlvGqSGvGKStLinallpe........le 124
                  e ++v +K Dl + ++ + ++ ++ ++++    e+++++ ++k+++++l +  k+   kt       +++vG   vGKS+L+n+l+ +        ++
   KHJ34741.1  67 ERLVVYTKKDLGSLNRiRDQRRENIIRNWHkpQETFFTDFQEKKDIKALLKFAKEyaeKThsliplrILVVGMPNVGKSSLLNSLRKSgvkrskaaAT 164
                  66889999999998885455566667777633578889999998888876554432225522222224579***************985655533323 PP

                  ---S--------------SEEEEEETTTEEEESS-SS CS
  RsgA_GTPase 125 lktgevseklgrGkhTTtavellelaegglliDtPGf 161
                   +   + +k  +G     +    +l+ g +l+DtPG+
   KHJ34741.1 165 GAQPGITRKIASGVKIVDRNAEKKLE-GVYLVDTPGV 200
                  33334666777777666666666666.9********7 PP

>> AIG1  AIG1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.3e-06    0.0017       1      66 [.     132     207 ..     132     220 .. 0.70

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.3e-06
                 EEEEEESSTTSSHHHHHHHHHTS--SS--TTTS....---SS-EEEEEEETT......EEEEEEE--SCCCTTCCH CS
        AIG1   1 ltivlvGktgnGkSaTgNsilgkkaFesklsaq....svtkkcqkksrtwdg......kkinViDTPglfdlsvsa 66 
                 l+i++vG   +GkS+  Ns+ ++ + +sk++a+    ++t+k  + ++ +d       + +  +DTPg+f   vs+
  KHJ34741.1 132 LRILVVGMPNVGKSSLLNSLRKSGVKRSKAAATgaqpGITRKIASGVKIVDRnaekklEGVYLVDTPGVFMPYVSD 207
                 69******************6666666655443112279999888776433323333456889*****99766654 PP

>> IIGP  Interferon-inducible GTPase (IIGP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   2.1e-06    0.0029      29      70 ..     125     166 ..     102     199 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2.1e-06
                 HHHHT--EEEEEEESTTSSHHHHHHHHTT--TTSTTS--SSC CS
        IIGP  29 keiesaklkiavtGdsGnGkssFinaLRliGheeedsAptGv 70 
                 k+ + ++l+i v+G    Gkss +n+LR  G    ++A tG+
  KHJ34741.1 125 KTHSLIPLRILVVGMPNVGKSSLLNSLRKSGVKRSKAAATGA 166
                 3456689*********************************97 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   4.9e-06    0.0068       4      71 ..     131     199 ..     129     213 .. 0.77

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 4.9e-06
                 EEEEEEEEBTTSSCCCCCCTTSSSS------------------S-EEEEEEEEET.TCEEE.EEEEE--- CS
      Septin   4 eftlmvvGesglGkttlintlfetdlieeekleeasekkkktveikkkkvvieed.gvkln.ltviDtpg 71 
                  + ++vvG   +Gk++l+n+l ++ +++++   + ++    t +i +  ++++ + + kl+ + ++Dtpg
  KHJ34741.1 131 PLRILVVGMPNVGKSSLLNSLRKSGVKRSKAAATGAQ-PGITRKIASGVKIVDRNaEKKLEgVYLVDTPG 199
                 6789***********************9976665544.34677777766666655355665477899998 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   7.1e-06    0.0098       1      37 [.     133     169 ..     133     199 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 7.1e-06
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEE CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfl 37 
                 ++++vG  +vGK+sll+++ ++ +++++ + +g++  
  KHJ34741.1 133 RILVVGMPNVGKSSLLNSLRKSGVKRSKAAATGAQPG 169
                 689**********************999999998753 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       8.3   1.2e+04      51      64 ..      82      95 ..      64     116 .. 0.54
   2 !   15.4   0.1   1.5e-05      0.02       1      41 [.     134     172 ..     134     192 .. 0.72
   3 ?   -1.8   0.0         3   4.2e+03      25      45 ..     297     320 ..     263     337 .. 0.56

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 8.3
      AAA_18 51 rldedkldklldal 64
                r+++++++++++++
  KHJ34741.1 82 RIRDQRRENIIRNW 95
                33333333333333 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 1.5e-05
      AAA_18   1 IlltGtpGvGKttlakeLskrlgfgvnlrdvakenglllev 41 
                 Il+ G+p vGK++l + L+k++  + +++  a+  ++ +++
  KHJ34741.1 134 ILVVGMPNVGKSSLLNSLRKSG--VKRSKAAATGAQPGITR 172
                 99******************96..55555555555555555 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 3
      AAA_18  25 gvnlrdvakenglllevdpe...a 45 
                 g+ + d + engl+   +++    
  KHJ34741.1 297 GIFVLDEIEENGLEKKINEQsviS 320
                 666666677776666666664441 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   3.2e-05     0.044      24      51 ..     131     158 ..     109     193 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.2e-05
      AAA_16  24 pelvllsGesGvGKsslvrellralekd 51 
                 p  +l++G++ vGKssl+++l+++  k+
  KHJ34741.1 131 PLRILVVGMPNVGKSSLLNSLRKSGVKR 158
                 4789******************976655 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   7.2e-05     0.099       5      58 ..     133     199 ..     131     201 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 7.2e-05
                 EEEEE-STTSSHHHHHHHHHHS...S---B---SS-EEETTG.............GGTT-SEEEETT CS
       SRPRB   5 avllvGlsdsGKTslftrLttd...svkktvtSqessaalkv..........ksekgskltliDfPG 58 
                 ++l+vG+ + GK sl++ L +      k + t  ++ ++ k+           ++k + + l+D PG
  KHJ34741.1 133 RILVVGMPNVGKSSLLNSLRKSgvkRSKAAATGAQPGITRKIasgvkivdrnAEKKLEGVYLVDTPG 199
                 699****************999443333334444777888774444555432223334455666665 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       6.2   8.5e+03      37      50 ..      95     109 ..      66     128 .. 0.49
   2 ?    6.6   0.0    0.0064       8.8       8      37 ..     134     163 ..     132     194 .. 0.83
   3 ?    3.8   0.0     0.047        65      41     102 ..     246     306 ..     229     335 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 6.2
      AAA_22  37 e.erpevvfvtlpss 50 
                 + ++ e++f + +++
  KHJ34741.1  95 WhKPQETFFTDFQEK 109
                 222333333333333 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0064
      AAA_22   8 lvvtGesGtGKTtllrrlleqldeeakaee 37 
                 ++v+G + +GK+ ll+ l+++ ++++ka+ 
  KHJ34741.1 134 ILVVGMPNVGKSSLLNSLRKSGVKRSKAAA 163
                 789****************99888777765 PP

  == domain 3  score: 3.8 bits;  conditional E-value: 0.047
      AAA_22  41 evvfvtlpsstsskdllrellralglelkaerlsseellealeqalraravielliiDEaqh 102
                 ++++ ++   ++  ++l+ + r +g+ +k+e  ++e+    + q +r+    +++++DE++ 
  KHJ34741.1 246 RLYHKYCHPTNDIVEFLTTVSRRIGRLKKGEIPDLEATALWIIQKWRQGNL-GIFVLDEIEE 306
                 556667777888999999999999999888888888888999999999999.*******997 PP

>> DUF1636  Protein of unknown function (DUF1636)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00033      0.45      70     101 ..     102     133 ..      94     141 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00033
     DUF1636  70 lfgdlepeesaeallefaalYaasedGlvpwk 101
                  f+d++++++++all+fa++Ya++++ l+p +
  KHJ34741.1 102 FFTDFQEKKDIKALLKFAKEYAEKTHSLIPLR 133
                 599***********************999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (345 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              13  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 2408.39
//
Query:       KHJ34742.1  [L=690]
Description: putative zn2 cys6 dna-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.9e-08   34.3   7.1    3.7e-08   33.3   7.1    1.5  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
      0.028   13.5   2.7       0.12   11.4   2.6    1.9  1  Fungal_trans  Fungal specific transcription factor domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   7.1   4.1e-12   3.7e-08       1      35 [.      18      54 ..      18      59 .. 0.88

  Alignments for each domain:
  == domain 1  score: 33.3 bits;  conditional E-value: 4.1e-12
                SS-HHHHHCT---ST.SSSS..-HHHHHCTHHHCCCCT CS
     Zn_clus  1 haCdnCrkkKvKCda.kkPa..CsnCkklnleCtfyse 35
                +aC++Cr++K +Cd  + P   Cs+C++lnleC+ ++ 
  KHJ34742.1 18 RACNQCRQQKLRCDVvQDPFtvCSRCARLNLECK-IEL 54
                69*************9888788***********9.765 PP

>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   2.6   1.3e-05      0.12       2     219 ..     152     351 ..     151     355 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.3e-05
  Fungal_trans   2 drffsnfhpqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsLl 98 
                   + f++ +hp + +l   ++ +++        ++++pll+++i+a++a+    + +   s +       i + l ++++     ++p++   ++++L 
    KHJ34742.1 152 KEFWTFYHPFLMFLCPSQLPNQY--------YEQHPLLFWTIIAVAARRHTAQPGLLLSLTGP-----I-TRLLWNTIG----EVPNN-HFVVKALC 229
                   67999999998777665555555........999*************9888888877444444.....2.233455444....78888.78999*** PP

  Fungal_trans  99 llelyektssdralher..hhgvavrlarslgLhrnpsyvgkks.lwklweeeaesrrRlwwaaFylDktialklGrppllddsqinlpLPcddddl 192
                   +++++ +  s +++     ++g+++++a+ +gLhr  +  + ++ +++l+ e+   r  +w  + ++  ++ + +G p    ++ ++l L ++d  l
    KHJ34742.1 230 IMCTWPLPISITSSDPThiLCGIMMKVATGIGLHRPMYTQEFSRvSIQLDREQLFDRLTTWTVCNIVAQRCGTGYGQPASTLYDWTQLTLLNEDASL 326
                   **********99999998999*************999999988899999999888888889999999999999999999666777788888888889 PP

  Fungal_trans 193 wesddaseetlvetklsneeksrkias 219
                     s++ +++ ++e  +++ + s++++s
    KHJ34742.1 327 KVSSELEAHLKIE--RFCDKVSKEMYS 351
                   9999999999988..677777777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (690 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       485  (0.0270511); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 4720.83
//
Query:       KHJ34743.1  [L=346]
Description: hypothetical protein EV44_g4233 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2466.10
//
Query:       KHJ34744.1  [L=950]
Description: putative atp-dependent dna helicase mph1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.6e-23   81.6   0.0    1.4e-22   80.5   0.0    1.5  1  ResIII      Type III restriction enzyme, res subunit
    3.2e-20   72.5   0.1    9.3e-20   71.0   0.1    1.8  1  Helicase_C  Helicase conserved C-terminal domain
    1.2e-16   61.0   0.0    1.2e-15   57.8   0.0    2.2  2  DEAD        DEAD/DEAH box helicase
     0.0012   18.6   0.0     0.0021   17.8   0.0    1.3  1  SWI2_SNF2   SWI2/SNF2 ATPase
  ------ inclusion threshold ------
      0.057   13.7   0.0       0.63   10.3   0.0    2.6  2  AAA_22      AAA domain


Domain annotation for each model (and alignments):
>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.5   0.0     4e-26   1.4e-22      13     169 ..     231     387 ..     222     389 .. 0.83

  Alignments for each domain:
  == domain 1  score: 80.5 bits;  conditional E-value: 4e-26
                 HHHT......T.TSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--........-SEEEE CS
      ResIII  13 enlleklkskr.dkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseaykeigkkvsgdkkka.kekdstnkkilvt 109
                 ++   ++ +++  +++l++++TG GKT++aa ++ +++++ k ++++f++p+k l+ q  e+  ++   +++ +++ ++g +  a ++++ + k+++++
  KHJ34744.1 231 RDYQYSIVKNGlFHNLLVALPTGLGKTFIAATIMLNYFRWTKTSQIVFVAPTKPLVAQQVEACFNVVGIPKS-QTTMLTGGQIPAlRAEEWSAKRVFFM 328
                 44444444333035777****************************************999888777777754.77777777777777788999****** PP

                 EHHHHHHTH........HHHTTT-SEEEEETGGGTTS.TTTHHH....HHT---SEEEEEESS- CS
      ResIII 110 tiqsldadseeeeeeseellrdrfdviiiDEaHrlgakkswrei....lekfkeavllglTATp 169
                 t q+l +d+      s  ++++++ ++++DEaHr++++ ++ ++     + +k++ +l+lTATp
  KHJ34744.1 329 TPQTLENDL-----VSGIADPKKIVLLVVDEAHRATGNYAYVRVvtflRRFNKSFRVLALTATP 387
                 *********.....9999*******************9899998677334447799*******9 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.0   0.1   2.6e-23   9.3e-20      16     110 ..     602     706 ..     591     707 .. 0.90

  Alignments for each domain:
  == domain 1  score: 71.0 bits;  conditional E-value: 2.6e-23
                 TSEEEEEESSHHHHHH.HHHHHHHT..TSTEEEESTT........STHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHH CS
  Helicase_C  16 ggkilifvntidrlek.vklllekk..gikvavlhge........lpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsyiqr 103
                 + ++++f++++d++e+ v++l+ ++   i++ v+ g+        ++q+++++++++f +g+++v++at+++e+G+di +v+l++ +d   ++ ++ qr
  KHJ34744.1 602 TTRVIVFAEYRDSAEDiVRVLN-RHgpLIRASVFVGQadskrsdgMNQKQQLKAIQDFTSGTYNVIVATSIGEEGLDIGQVDLIVCYDSSASPIRMLQR 699
                 6799**********98777774.4447577777777777888888****************************************************** PP

                 HTTSSST CS
  Helicase_C 104 iGRtgRa 110
                 +GRtgR 
  KHJ34744.1 700 MGRTGRK 706
                 ******6 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.8   0.0   3.2e-19   1.2e-15       2     174 ..     232     392 ..     231     394 .. 0.87
   2 ?    0.4   0.0      0.13   4.7e+02      46     126 ..     601     685 ..     544     686 .. 0.70

  Alignments for each domain:
  == domain 1  score: 57.8 bits;  conditional E-value: 3.2e-19
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHHTTCSE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskldngvdi 100
                 d+Q +++++ l  +++lva +TG GKT +++  +l+ +   + +++ ++++v+Pt+ L+ q+++ + ++    + ++ +++gg+      ++  +  ++
  KHJ34744.1 232 DYQYSIVKNGL-FHNLLVALPTGLGKTFIAATIMLNYF---RWTKTSQIVFVAPTKPLVAQQVEACFNVVGIPKSQTTMLTGGQIPALRAEEW-SAKRV 325
                 67888888888.679********************999...568899*******************999998777888899999999999999.899** PP

                 EEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD 101 vvgtpgrlddllstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkdvk 174
                 +++tp+ l + l +g  + +++ +lV+DEa+r   +     + + l+++       +++ +v++l+AT+ ++v+
  KHJ34744.1 326 FFMTPQTLENDLVSGIADPKKIVLLVVDEAHRATGNYAYVRVVTFLRRF-------NKSFRVLALTATPGSSVE 392
                 *********955568889******************6666666667777.......56678*******998876 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.13
                 TS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEET........TSSHHHHHHHHHTTCSEEEEEHHHHHH.HHHCTSSHCTTEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx RF
        DEAD  46 tgpkalivePtreLaeqtlnnlkkfkkyidlrvlliig........gvaardqlskldngvdivvgtpgrldd.llstgklnlsqvrflV 126
                 +++++++ +  r  ae++++ l++ +  i+  +++++g        g    +q+++l++  d++ gt   ++   + ++ l++ qv ++V
  KHJ34744.1 601 STTRVIVFAEYRDSAEDIVRVLNRHGPLIR--ASVFVGqadskrsdGM---NQKQQLKAIQDFTSGTYNVIVAtSIGEEGLDIGQVDLIV 685
                 567999999999999999999999999754..4444553333222233...344444333666666666666633344556666666665 PP

>> SWI2_SNF2  SWI2/SNF2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   5.8e-07    0.0021      27     159 ..     252     389 ..     247     409 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 5.8e-07
   SWI2_SNF2  27 qGSGKsltmvflakklleeelknpkvvvvtDRkdLd.kQlsktfakageekpkqaesrkeLkell.eke..sekiifttiqKfeeeekeklevlseren 121
                 +G GK++  ++++ +  +  +k  ++v+v   k L  +Q+ + f+ +g  k++++  +      l ++e  +++++f t q +e++        + ++ 
  KHJ34744.1 252 TGLGKTFIAATIMLNYFR-WTKTSQIVFVAPTKPLVaQQVEACFNVVGIPKSQTTMLTGGQIPALrAEEwsAKRVFFMTPQTLENDL--VSGIADPKKI 347
                 688999988888888888.789999*****999996156777788777666554444444444442333448899999999996642..2355666666 PP

   SWI2_SNF2 122 iivlvDEaHRsqyg....elakklrkalpnaafigFTGTPil 159
                 ++++vDEaHR   +    ++ + lr++ +   ++++T TP +
  KHJ34744.1 348 VLLVVDEAHRATGNyayvRVVTFLRRFNKSFRVLALTATPGS 389
                 66779*****9877777789999999999***********65 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00017      0.63      13     115 ..     251     374 ..     245     389 .. 0.66
   2 ?    0.5   0.0      0.19   6.8e+02      41     130 ..     379     473 ..     364     477 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00017
      AAA_22  13 esGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka.................erlsseell.ealeqalrarav.. 91 
                 ++G GKT+ +++++ ++ ++ k     +++vfv ++++   ++  ++ ++ +g +++                  + ++   +  ++le+ l +  +  
  KHJ34744.1 251 PTGLGKTFIAATIMLNYFRWTK----TSQIVFVAPTKPL-VAQQVEACFNVVGIPKSQttmltggqipalraeewSAKRVFFMTpQTLENDLVSGIAdp 344
                 7999***999999999977654....3444455555554.44444555555555555566666666666777545445555555566666665555589 PP

      AAA_22  92 ..ielliiDEaqhlr.s...eealeeLrsl 115
                   i+ll++DEa++ + +    +++++Lr++
  KHJ34744.1 345 kkIVLLVVDEAHRATgNyayVRVVTFLRRF 374
                 99***********85425667777777665 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.19
      AAA_22  41 evvfvtlpsstsskdllrellralglelkaerlsseellealeqalraravielliiDEaqhlr..s...eealeeLrsllnl........srkgvqli 126
                 +v+  t++ ++ s +  +e+  +l+ ++ +   ++ee +  ++q +++r+v   +++D  + ++  +   ++al+ L   +n         +r++++l 
  KHJ34744.1 379 RVLALTATPGS-SVEAVQEIIDNLEISKVE--IRTEESM-DIQQFVHRRDV-DQILLDPSDEMTqiKdhlAKALQPL---VNTlcaanaywNRDPMALT 469
                 44455555544.555558888888888777..4444444.58999999999.9999999999864423443333333...3322223345556666666 PP

      AAA_22 127 LvGt 130
                  +G+
  KHJ34744.1 470 TFGM 473
                 6665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (950 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       512  (0.0285571); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.72u 0.29s 00:00:01.01 Elapsed: 00:00:00.45
# Mc/sec: 6408.78
//
Query:       KHJ34745.1  [L=115]
Description: putative periodic tryptophan protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-06   28.3   0.1      0.011   16.6   0.0    2.5  2  WD40      WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   6.1e-07     0.011       2      38 .]      10      48 ..       9      48 .. 0.79
   2 !    9.5   0.0    0.0001       1.8      17      38 .]      71      95 ..      55      95 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 6.1e-07
                EEEEEEESS.SSEEEEEEETTSSE.......EEEEETTSEEEEEE CS
        WD40  2 qclrtltGH.ssvtslafspdgaw.......lasGsdDgtvriWd 38
                ++++ l +H +sv+++      +        +a+Gs D+ v++W+
  KHJ34745.1 10 KPVWLLQAHdKSVCAF------DInpiipgfMATGSSDKLVKLWN 48
                57778999*999*999......44454555589**99*******8 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0001
                EEETTSSE....EEEEETTSEEEEEE CS
        WD40 17 afspdgaw....lasGsdDgtvriWd 38
                +f pd+       ++Gs +g++ iWd
  KHJ34745.1 71 SFAPDQEVrfrlAVAGS-KGSLQIWD 95
                56666666667445799.*******9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (115 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       259  (0.0144459); expected 358.6 (0.02)
Passed bias filter:                      249  (0.0138881); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 840.94
//
Query:       KHJ34746.1  [L=168]
Description: hypothetical protein EV44_g1946 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0056   16.0  11.0      0.007   15.7  11.0    1.2  1  NOA36            NOA36 protein
  ------ inclusion threshold ------
      0.015   14.3  13.2      0.017   14.1  13.2    1.2  1  Radial_spoke     Radial spokehead-like protein
      0.023   15.0  16.6      0.028   14.7  16.6    1.2  1  RNA_pol_3_Rpc31  DNA-directed RNA polymerase III subunit Rpc3
      0.037   12.3  14.3      0.048   11.9  14.3    1.2  1  Nop14            Nop14-like family
      0.076   12.6  11.6      0.092   12.3  11.6    1.2  1  PPP4R2           PPP4R2
       0.12   11.3   4.2       0.14   11.1   4.2    1.1  1  DUF913           Domain of Unknown Function (DUF913)
       0.16   12.2   2.1       0.31   11.3   2.1    1.5  1  DUF4770          Domain of unknown function (DUF4770)
       0.34   10.1   7.5       0.44    9.7   7.5    1.2  1  TRAP_alpha       Translocon-associated protein (TRAP), alpha 
       0.58    8.8   1.7       0.62    8.7   1.7    1.2  1  Folate_carrier   Reduced folate carrier
       0.84   10.0   9.6        1.4    9.3   0.3    2.1  2  DUF3362          Domain of unknown function (DUF3362)
          1    8.2   6.8        1.2    7.9   6.8    1.2  1  CENP-T_N         Centromere kinetochore component CENP-T N-te
        1.2    9.0   5.7        1.8    8.3   5.7    1.3  1  VAD1-2           Vitamin A-deficiency (VAD) rat model signall
        1.7    6.7  18.7        2.2    6.3  18.7    1.1  1  DNA_pol_phi      DNA polymerase phi
        1.8    7.7   5.6        2.4    7.2   5.6    1.2  1  D123             D123
        2.1    7.7  20.3        2.8    7.3  20.3    1.2  1  DUF4746          Domain of unknown function (DUF4746)
        2.3    8.0  15.2        2.8    7.7  15.2    1.1  1  RR_TM4-6         Ryanodine Receptor TM 4-6
        2.6    6.2   4.9        3.4    5.8   4.9    1.1  1  RAB3GAP2_C       Rab3 GTPase-activating protein regulatory su
        2.7    5.7   7.6        3.5    5.3   7.6    1.2  1  PI3K_1B_p101     Phosphoinositide 3-kinase gamma adapter prot
        3.1    6.6  13.2        3.7    6.3  13.2    1.1  1  HSP90            Hsp90 protein
        4.7    7.7  15.2        7.6    7.0  15.2    1.4  1  CENP-B_dimeris   Centromere protein B dimerisation domain
        6.2    5.2   7.0        7.4    5.0   7.0    1.1  1  RRN3             RNA polymerase I specific transcription init
        7.2    7.9  12.9       0.63   11.2   3.6    2.4  2  DAP              Death-associated protein
        7.8    5.5  10.8        9.3    5.3  10.8    1.2  1  Astro_capsid_p   Turkey astrovirus capsid protein
        7.8    6.2  17.6         20    4.9  17.6    1.7  1  DUF4637          Domain of unknown function (DUF4637)
         10    4.8  11.5         12    4.6  11.5    1.1  1  Presenilin       Presenilin


Domain annotation for each model (and alignments):
>> NOA36  NOA36 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7  11.0   9.8e-06     0.007     244     303 ..      78     142 ..      25     146 .. 0.48

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 9.8e-06
       NOA36 244 sddddddeedsdydaylkalasg........ddeddegdedddddddeedddeeeddedeeeeeeees 303
                 +++      +  +++y+k la++         + + +g ++++++++ee+++eee++e+eeeeeee++
  KHJ34746.1  78 AEER---FCEERMKEYRKWLAAEnealiptnYNLEGQGRQEEEEEEEEEEEEEEEEEEEEEEEEEEKK 142
                 2222...2333344444444444344555322223333444444333333333333333333333333 PP

>> Radial_spoke  Radial spokehead-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1  13.2   2.3e-05     0.017     346     390 ..     108     151 ..      56     161 .. 0.68

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.3e-05
  Radial_spoke 346 ilkqGrvtwvnpekeeeeeeeeeeeeeeeeeeeeepEtgpplltp 390
                   +  qGr++  ++e+eeeeeeeeeeee eeeeeee++ t  ++l+p
    KHJ34746.1 108 LEGQGRQEEEEEEEEEEEEEEEEEEE-EEEEEEEKKKTNGDVLSP 151
                   45588888766544444444444444.455555555555555555 PP

>> RNA_pol_3_Rpc31  DNA-directed RNA polymerase III subunit Rpc31
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7  16.6   3.9e-05     0.028     148     209 ..      58     139 ..      16     147 .. 0.47

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 3.9e-05
  RNA_pol_3_Rpc31 148 keikgkskkkk........eadeedeegkelleklk..............elaeeeddee......ekkekedeeeee.eeeeddefdddd 209
                      k+ +g++ k k        +a ee   +++++e +k              +               e++e+e+eeeee eeee++e ++++
       KHJ34746.1  58 KKTGGRRTK-KesghssvrGAAEERFCEERMKEYRKwlaaenealiptnyN--------LegqgrqEEEEEEEEEEEEeEEEEEEEEEEEE 139
                      222233222.23566555544444444455555555444444555554441........04443211111111111111122222222222 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9  14.3   6.7e-05     0.048     319     395 ..      78     141 ..      17     161 .. 0.39

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 6.7e-05
       Nop14 319 ldddfvleeeeeeeefglgkglka...taeeeeeededdfeedddlveseseeeeeeeeedeeeeedeeeeeeeeededd 395
                  ++ f +e+++e +  +l ++ +a   t+ ++              + ++++eee eeee+eeeee+eeeeeeeee+e++
  KHJ34746.1  78 AEERFCEERMKEYR-KWLAAENEAlipTNYNL--------------EGQGRQEEE-EEEEEEEEEEEEEEEEEEEEEEEK 141
                 22333333322222.22222222112211111..............111111111.111111111111111111111111 PP

>> PPP4R2  PPP4R2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3  11.6   0.00013     0.092     241     286 ..      76     141 ..       4     146 .. 0.41

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00013
      PPP4R2 241 ekdesvkvee.............................kdddeeddeedtdyveeeeddesedddeeeeeeeee 286
                  + e     e                                 + ++ee+++ +eeee++e+e+++eeeeeeee+
  KHJ34746.1  76 GAAE-----ErfceermkeyrkwlaaenealiptnynleG---QGRQEEEEE-EEEEEEEEEEEEEEEEEEEEEK 141
                 2222.....2333335555666666666667766654321...222222222.2222222222222222222222 PP

>> DUF913  Domain of Unknown Function (DUF913)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   4.2   0.00019      0.14     288     329 ..      81     155 ..      15     162 .. 0.51

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00019
      DUF913 288 k.................................ssededvemedaeeetesesdeseeseeekeknslldyiln 329
                 +                                 ++e+e++e+e++eee+e+e++e+ee+++++++  l++y + 
  KHJ34746.1  81 RfceermkeyrkwlaaenealiptnynlegqgrqEEEEEEEEEEEEEEEEEEEEEEEEEEKKKTNGDVLSPYCDK 155
                 144444445566666666677777777777665322222233333333444444444444455566668888765 PP

>> DUF4770  Domain of unknown function (DUF4770)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   2.1   0.00044      0.31      82     126 ..     112     156 ..      94     165 .. 0.58

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00044
     DUF4770  82 kerkkqekkkkkrlklkkkkekkrkekekkkkknkkklspYfekq 126
                  +++++e+++++++++++++e++++e+e+kkk+n   lspY  k 
  KHJ34746.1 112 GRQEEEEEEEEEEEEEEEEEEEEEEEEEEKKKTNGDVLSPYCDKS 156
                 223333333444444555555555566666667777888**9886 PP

>> TRAP_alpha  Translocon-associated protein (TRAP), alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   7.5   0.00062      0.44      42      71 ..     116     144 ..      83     165 .. 0.47

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00062
  TRAP_alpha  42 eaedeeveeeeeeeeeeeeeeeedeeelka 71 
                 e e+ee+eeeeeeeeeeeeeeee+ee+ k+
  KHJ34746.1 116 E-EEEEEEEEEEEEEEEEEEEEEEEEKKKT 144
                 1.1111111111111111222222222222 PP

>> Folate_carrier  Reduced folate carrier
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   1.7   0.00086      0.62     198     249 ..     114     165 ..      70     167 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00086
  Folate_carrier 198 kkdekseeeseeseeeenekeeeeeksseesekkvlklllkelkeaysnkkl 249
                     +++e++eee+ee+eeee+e+eeeee+++++++ +vl+ ++ + ++++++++l
      KHJ34746.1 114 QEEEEEEEEEEEEEEEEEEEEEEEEEEKKKTNGDVLSPYCDKSTHIFQSRTL 165
                     3333444444455555566666667777888888999999888888888765 PP

>> DUF3362  Domain of unknown function (DUF3362)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   3.6     0.052        37      79     146 ..       3      70 ..       1      80 [. 0.60
   2 ?    9.3   0.3    0.0019       1.4      78     128 ..      97     148 ..      90     167 .. 0.59

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.052
     DUF3362  79 kkhLiptfqpkvdgkd.srqsarrknskagkdaakrasksksskrekagkvraqskkpqkgksktqhtg 146
                 k++Li ++ +  ++++ + ++  r+ + +g++   r s++k+++    g+   +++k++ g+ ++++ g
  KHJ34746.1   3 KNCLIQARGNGGESTQkRVTRIVRQTNANGRKLDMRRSADKQARGGAIGQ-CGRQSKKTGGRRTKKESG 70 
                 89999999988555442555555666666777777777776664444444.334444444444444444 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0019
     DUF3362  78 gkkhLiptfqpk.vdgkdsrqsarrknskagkdaakrasksksskrekagkv 128
                 +++ Lipt  +   +g++++++ +++++++++++ +++++++++k++++g+v
  KHJ34746.1  97 ENEALIPTNYNLeGQGRQEEEEEEEEEEEEEEEEEEEEEEEEEEKKKTNGDV 148
                 5678999876655677665555555555555555555555555555555554 PP

>> CENP-T_N  Centromere kinetochore component CENP-T N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   6.8    0.0017       1.2     293     357 ..      56     143 ..      11     163 .. 0.51

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0017
    CENP-T_N 293 rtqssgsrlqnnspekpaevdalalsfsea.......................epeghtevteaegsqeavEakepegssededtser 357
                 + + +g r  ++ + +++   a++ +f e+                       e +g +e +e e+ +e+ E++e+e+ +e+e+++++
  KHJ34746.1  56 QSKKTGGRRTKKESGHSSVRGAAEERFCEErmkeyrkwlaaenealiptnynlEGQGRQEEEEEEEEEEEEEEEEEEEEEEEEEEKKK 143
                 3333333333333333332233333333334444555555555555444444444444444444333333333333333333333333 PP

>> VAD1-2  Vitamin A-deficiency (VAD) rat model signalling
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   5.7    0.0026       1.8     149     196 ..     113     160 ..      87     167 .. 0.73

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0026
      VAD1-2 149 avdepekekltkellsekplearepqkawkqedknlahpylDfskpgl 196
                   +e+e+e++++e  +e+++e++e ++ +k+ + ++  py D s   +
  KHJ34746.1 113 RQEEEEEEEEEEEEEEEEEEEEEEEEEEKKKTNGDVLSPYCDKSTHIF 160
                 4455566666666667777777888888889999999****9887655 PP

>> DNA_pol_phi  DNA polymerase phi
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  18.7    0.0031       2.2     634     678 ..     111     143 ..      95     155 .. 0.43

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0031
  DNA_pol_phi 634 qaelfedededeeddeeeeeeddeededseedddeeesdedeede 678
                  q              +eeeee++ee+e++ee+++eee++e+e+++
   KHJ34746.1 111 QGR------------QEEEEEEEEEEEEEEEEEEEEEEEEEEKKK 143
                  333............222222222222222222222222222222 PP

>> D123  D123
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   5.6    0.0033       2.4      21      69 ..      90     139 ..      80     158 .. 0.50

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0033
                 HHHHHCSSS.EE-----...............------------------ CS
        D123  21 fleYLeedg.ivlpeeseeekesaeesesdsdseesdsedeeeeeeeeee 69 
                 + ++L++++  ++p++ + e + ++e+e+++++ee+++e+eeeeeeeeee
  KHJ34746.1  90 YRKWLAAENeALIPTNYNLEGQGRQEEEEEEEEEEEEEEEEEEEEEEEEE 139
                 56677665535555555555442222222222222222222222222221 PP

>> DUF4746  Domain of unknown function (DUF4746)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3  20.3    0.0039       2.8      69     139 ..      78     142 ..      64     152 .. 0.41

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0039
     DUF4746  69 eeeelveevsseeetlekqekekektkakeaeltadepaeeeeaeeeeeeeaveeeeeeeeeeeeeeedke 139
                  ee++ ee ++e +++ ++e+e+   ++ + e +       +++eeeeeee+ eeeeeeeeeeeeeee+k+
  KHJ34746.1  78 AEERFCEERMKEYRKWLAAENEALIPTNYNLEGQG------RQEEEEEEEEEEEEEEEEEEEEEEEEEEKK 142
                 34666677777666666665555544433322222......111111111111111111111111111111 PP

>> RR_TM4-6  Ryanodine Receptor TM 4-6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7  15.2     0.004       2.8      28     144 ..      34     143 ..      13     163 .. 0.39

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.004
                 XXXXXX...XXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXX..................XXXXXXXXXXXXXXXXX CS
    RR_TM4-6  28 eedlaeaageeeeedllsdvfgldlkkeggqykvvakkseagLgDlseteaeesptpelkkkla..................eeeeaeeekeeeeepea 108
                 + d++++a ++++   + +  g ++kk gg      +k+e+g + +   + e+    e++ k+                   e                
  KHJ34746.1  34 KLDMRRSADKQARGGAIGQ-CGRQSKKTGGRR----TKKESGHSSVRGAAEERFC--EERMKEYrkwlaaenealiptnynlE---------------- 109
                 3556655556666666666.477777777733....3333333333322222222..22222221111222222223322221................ PP

                 XX.XXXXXXXXXXXXXXXX..........XXXXXXX CS
    RR_TM4-6 109 eaeekadaengekeekekekeeeekeseeeeeekkk 144
                    + +++e++e+ee+e+e+eeee+e+eeeeeekkk
  KHJ34746.1 110 --GQGRQEEEEEEEEEEEEEEEEEEEEEEEEEEKKK 143
                 ..1222222222222111111111111111111111 PP

>> RAB3GAP2_C  Rab3 GTPase-activating protein regulatory subunit C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   4.9    0.0047       3.4     193     225 ..     110     142 ..      87     160 .. 0.43

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0047
  RAB3GAP2_C 193 leekkkeeeeeeellaekelaaeekeeeeeeke 225
                  + +++eeeeeee+++e+e+++ee+eeeeeek+
  KHJ34746.1 110 GQGRQEEEEEEEEEEEEEEEEEEEEEEEEEEKK 142
                 222222222222222222222222222222222 PP

>> PI3K_1B_p101  Phosphoinositide 3-kinase gamma adapter protein p101 subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   7.6    0.0049       3.5     312     346 ..     113     147 ..      96     165 .. 0.46

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0049
  PI3K_1B_p101 312 eledeeeedeedvdeeedleeeeeeeeedslarss 346
                   ++e+eeee+ee+ +eee+ eeeeeeeee+++++  
    KHJ34746.1 113 RQEEEEEEEEEEEEEEEEEEEEEEEEEEKKKTNGD 147
                   33333333333333333333333333333333333 PP

>> HSP90  Hsp90 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3  13.2    0.0052       3.7      37      68 ..     114     144 ..      83     158 .. 0.57

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0052
                 XXXXXXXXXXXXXXXXXXXXXXXXXX..XXXX CS
       HSP90  37 eeeeeeeeeeeeeeeeakveeeeeeeeekkkt 68 
                 +eeeeeeeeeeeeeee++ eeeeee eekkkt
  KHJ34746.1 114 QEEEEEEEEEEEEEEEEEEEEEEEE-EEKKKT 144
                 2333333332222222222222222.223322 PP

>> CENP-B_dimeris  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0  15.2     0.011       7.6      11      37 ..     113     139 ..     103     157 .. 0.45

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.011
  CENP-B_dimeris  11 dsesesdeeeeeeeedeededeedded 37 
                       e e +eeeeeeee+ee+e+ee++e+
      KHJ34746.1 113 RQEEEEEEEEEEEEEEEEEEEEEEEEE 139
                     333333333333332222222222222 PP

>> RRN3  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   7.0      0.01       7.4     218     248 ..     115     143 ..      79     163 .. 0.54

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.01
        RRN3 218 edlddeedeeleeeleededdedddeddees 248
                 e+ ++ee+ee+eee ee  ++e+++e+++++
  KHJ34746.1 115 EEEEEEEEEEEEEEEEE--EEEEEEEEEKKK 143
                 22222222222222111..111111111111 PP

>> DAP  Death-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.1   0.2       0.3   2.1e+02       8      36 ..      58      86 ..      54     107 .. 0.53
   2 ?   11.2   3.6   0.00088      0.63      21      68 ..     116     162 ..     108     165 .. 0.50

  Alignments for each domain:
  == domain 1  score: 3.1 bits;  conditional E-value: 0.3
         DAP  8 vKaGGmRivkkkkeeeeekeeekeek..eee 36
                 K GG R +k   +++ +   + ee+  ee+
  KHJ34746.1 58 KKTGGRRTKKESGHSSVR--GAAEERfcEER 86
                566776665555444443..22222222333 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00088
         DAP  21 eeeeekeeekeekeeeeselevssppkvqqknvllsgavakgdkdfpp 68 
                 eeeee+eee+ee+eeee+e e+ + +k++++  +ls   +k ++ f +
  KHJ34746.1 116 EEEEEEEEEEEEEEEEEEEEEE-EEEKKKTNGDVLSPYCDKSTHIFQS 162
                 2222222222222222222222.3333345557799999999998876 PP

>> Astro_capsid_p  Turkey astrovirus capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3  10.8     0.013       9.3     235     266 ..     114     145 ..      63     156 .. 0.61

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.013
                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Astro_capsid_p 235 sdpsdeedeevsdeetdtevesdeDeddevdr 266
                     +++++ee+ee ++ee+++e e++e e+   ++
      KHJ34746.1 114 QEEEEEEEEEEEEEEEEEEEEEEEEEEKKKTN 145
                     22222222233344444444444444444444 PP

>> DUF4637  Domain of unknown function (DUF4637)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9  17.6     0.028        20      16      41 ..     115     143 ..     104     157 .. 0.41

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.028
     DUF4637  16 eveeeeaeeeseeedee...edraeeesa 41 
                 e+eeee+eee+eee+ee   e+++ee+++
  KHJ34746.1 115 EEEEEEEEEEEEEEEEEeeeEEEEEEKKK 143
                 22222222222222222000122222222 PP

>> Presenilin  Presenilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6  11.5     0.016        12     237     302 ..      58     141 ..      14     158 .. 0.44

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.016
  Presenilin 237 eeeeaekkkeeasesskeeeseeesseksaqsse......................................seeeseeesseaessaeesseekesee 297
                 +++  +++k+e+ +ss                 +                                      +   +eee++e+e+++ee++ee+e ee
  KHJ34746.1  58 KKTGGRRTKKESGHSSV----------------RgaaeerfceermkeyrkwlaaenealiptnynlegqgrQ---EEEEEEEEEEEEEEEEEEEE-EE 136
                 22222222222222222................1333444444555555578888777777766655443211...11111111111111111111.11 PP

  Presenilin 298 ssess 302
                 ++e++
  KHJ34746.1 137 EEEEK 141
                 11111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2499  (0.139383); expected 358.6 (0.02)
Passed bias filter:                     1156  (0.0644765); expected 358.6 (0.02)
Passed Vit filter:                       333  (0.0185733); expected 17.9 (0.001)
Passed Fwd filter:                        70  (0.00390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.78u 0.31s 00:00:01.09 Elapsed: 00:00:00.44
# Mc/sec: 1137.67
//
Query:       KHJ34747.1  [L=258]
Description: putative wd repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (258 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1134  (0.0632495); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2094.13
//
Query:       KHJ34748.1  [L=1031]
Description: putative pre-mrna splicing factor atp-dependent rna helicase prp16 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-22   79.9   1.5    7.6e-22   77.6   0.0    2.9  2  HA2          Helicase associated domain (HA2)
    1.2e-17   64.0   0.0    6.4e-17   61.7   0.0    2.4  1  OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fol
    2.8e-14   53.4   0.0    9.9e-14   51.6   0.0    2.0  1  Helicase_C   Helicase conserved C-terminal domain
    1.6e-06   28.0   0.0    4.6e-06   26.5   0.0    1.8  1  DEAD         DEAD/DEAH box helicase
    3.6e-05   23.2   0.4    0.00018   20.9   0.0    2.1  2  DUF2075      Uncharacterized conserved protein (DUF2075)
    0.00039   20.7   0.1     0.0013   19.0   0.1    1.8  1  AAA_22       AAA domain
      0.002   17.2   0.0     0.0046   16.0   0.0    1.6  1  T2SSE        Type II/IV secretion system protein
     0.0049   16.6   0.0       0.01   15.6   0.0    1.5  1  AAA_30       AAA domain
     0.0051   17.2   0.0      0.015   15.7   0.0    1.7  1  AAA_19       AAA domain
  ------ inclusion threshold ------
      0.018   14.4   0.0      0.036   13.4   0.0    1.4  1  ATPase       KaiC
       0.04   14.1   0.0       0.11   12.7   0.0    1.7  1  GAD          GAD domain
      0.051   13.6   0.0      0.098   12.6   0.0    1.5  1  Flavi_DEAD   Flavivirus DEAD domain
      0.069   13.2   0.1       0.38   10.8   0.1    2.2  1  AAA_14       AAA domain
      0.098   12.3   0.2       0.26   10.9   0.2    1.7  1  SRP54        SRP54-type protein, GTPase domain
       0.16   12.5   0.8       0.84   10.2   0.0    2.5  2  ABC_tran     ABC transporter
       0.16   11.9   6.4        2.7    7.9   0.0    3.3  3  ResIII       Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> HA2  Helicase associated domain (HA2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.1       1.7   1.9e+03      79      93 ..     226     240 ..     188     289 .. 0.65
   2 !   77.6   0.0   6.8e-25   7.6e-22       4     107 ..     696     780 ..     693     822 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 1.7
         HA2  79 eekakkkrkeeekar 93 
                 e++++k+r+++++++
  KHJ34748.1 226 EKRQQKERQKQAQEA 240
                 222333333333322 PP

  == domain 2  score: 77.6 bits;  conditional E-value: 6.8e-25
         HA2   4 lLvalgALdeegnlTelGrkmaelPlsprlakmLlaaaeleegcldevitivAalsveeifleeneeekeeeeeeeekakkkrkeeekarrklahkdae 102
                 +L algALd+ g+lTelG+km ++P++p+lak+L+++ e+  gc +e++tiv++lsv ++f +++e ++e+++               ar+k+  ++  
  KHJ34748.1 696 DLWALGALDNLGELTELGKKMTAFPMDPSLAKLLITSEEY--GCSEEMLTIVSMLSVPNVFYRPKERQEESDA---------------AREKFFVPE-- 775
                 799******99**************************666..**********************976654433...............222233333.. PP

         HA2 103 gDhlt 107
                 +Dhlt
  KHJ34748.1 776 SDHLT 780
                 66665 PP

>> OB_NTP_bind  Oligonucleotide/oligosaccharide-binding (OB)-fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.7   0.0   5.7e-20   6.4e-17       1      81 [.     839     916 ..     839     918 .. 0.93

  Alignments for each domain:
  == domain 1  score: 61.7 bits;  conditional E-value: 5.7e-20
                  HHHHHHHHHTTCEEEEEETTCCEEETTTCEEEEE-TTSTTTTT...TSSSEEEEEEEEESSSEEEEEEEEE-HHHHHHHST CS
  OB_NTP_bind   1 lraillaGlypqiarkdpskkdyktartktrvfihpsSvlaknekekepewvvytelvettklylrdltaidpawLllfag 81 
                  +r+++++G+y q a+ +  ++ y  +rt+  v++hp+S+l        p++vvy+el+ t+k y+ ++t +dp+wL++++g
   KHJ34748.1 839 IRKCICSGYYHQAAKVKGLGE-YINLRTSVTVQLHPTSALYG--LGYLPDYVVYHELILTSKEYMSTVTSVDPYWLAELGG 916
                  89************6666665.99999**************7..569*******************************997 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   0.0   8.8e-17   9.9e-14       9     111 .]     504     631 ..     495     631 .. 0.88

  Alignments for each domain:
  == domain 1  score: 51.6 bits;  conditional E-value: 8.8e-17
                 HHHHTTTTSEEEEEESSHHHHHH.HHHHHHHT.......TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSS....S CS
  Helicase_C   9 llkleeeggkilifvntidrlek.vklllekk.......gikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlp....r 95 
                 + + + + g+il+f++ ++++e  ++l++e+        +++++++++++p++ + +i+++   g ++v++at++ae++++++++ +V++ ++     +
  KHJ34748.1 504 I-HVSMSSGDILVFMTGQEDIEVtCELIRERLdtlddppKLSILPIYSQMPADLQAKIFDKAAPGVRKVIVATNIAETSLTVDGIMYVVDSGYSklkvY 601
                 3.4677899**********99878888866667888899*******************************************************76664 PP

                 SH..............HHHHHHHTTSSSTT CS
  Helicase_C  96 nv..............tsyiqriGRtgRag 111
                 n+              +++ qr+GR+gR g
  KHJ34748.1 602 NPrmgmdtlqitpisqANASQRAGRAGRTG 631
                 4488999999999999************86 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   4.1e-09   4.6e-06       7     172 ..     311     461 ..     298     465 .. 0.74

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 4.1e-09
                 HHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETTSSHHHHHHHHH.TTCSEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxx RF
        DEAD   7 aiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliiggvaardqlskld.ngvdivvgt 104
                  +  i +++ ++v +eTGsGKT+     +++  y   g+ g  + +  P r  a  +++++++ ++   +++ +++g  a     ++   +++ i ++t
  KHJ34748.1 311 LLRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGY---GDIG-LIGCTQPRRVAAMSVAKRVSEEME---CKLGSTVG-YAI--RFEDCTsKETIIKYMT 399
                 556677888999**********985555554443...4444.555899*************99999...44444444.344..44444316699***** PP

                 HHHHHH.HHHCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBS.HH CS
                 xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx RF
        DEAD 105 pgrldd.llstgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlp.kd 172
                  g l++  l++    l++ +++++DEa++   +   d +  +++++ +   d k    +iv SAT++ k+
  KHJ34748.1 400 DGVLLReSLNEPD--LDRYSCVIMDEAHERALN--TDVLMGLFKKVLSRRRDLK----LIVTSATMNsKK 461
                 *****94555555..*************98887..7888888888855555555....********9665 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   1.6e-07   0.00018       2      99 ..     319     427 ..     318     452 .. 0.88
   2 ?   -1.2   0.5      0.83   9.3e+02     197     249 ..     953    1012 ..     933    1021 .. 0.58

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 1.6e-07
     DUF2075   2 avvlVtGvaGtGKtvvllnllael.......eddeeertavylsvNhplvlvlrealakkeekkkkkeafeklssfinnlsef...kkaeekkeepked 90 
                 +v++V G++G+GKt  l ++l+e            + r+++ +sv ++  + ++ +l ++     + e+ +  +++i+ ++ +   ++  ++ + ++  
  KHJ34748.1 319 QVIIVVGETGSGKTTQLTQFLYEDgygdiglIGCTQPRRVAAMSVAKRVSEEMECKLGSTVGYAIRFEDCTSKETIIKYMTDGvllRESLNEPDLDRYS 417
                 79**********************8888888777799********************999966667788888888999999889*9999999******* PP

     DUF2075  91 vvivDEAh.r 99 
                 +vi+DEAh r
  KHJ34748.1 418 CVIMDEAHeR 427
                 ********44 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.83
     DUF2075  197 qenfdirvfddleelkkalkeknkesg......rsrlvatydakrl.aekkkkkskekdv 249 
                  +++ +i++ ++ e+    l++k+k +       +s l+at + + + + +kkk+s+++++
  KHJ34748.1  953 SRDQKIKLEQNHEQVTCSLENKKKINSpslvfsSSSLIATVTTDSNnKIGKKKNSNDNKI 1012
                  555556666666666666555544443322222689999999998844444444444444 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.1   1.1e-06    0.0013       4     126 ..     317     451 ..     314     458 .. 0.70

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.1e-06
      AAA_22   4 tagilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka.........erlsseellealeqalrarav.. 91 
                 + ++++v+Ge+G+GKTt l ++l+++         + +++ +t p      ++++++ ++++ +l +            s+e +++++++ +  r    
  KHJ34748.1 317 DNQVIIVVGETGSGKTTQLTQFLYEDGYG------DIGLIGCTQPRRVAAMSVAKRVSEEMECKLGStvgyairfeDCTSKETIIKYMTDGVLLRESln 409
                 6789*********************8533......6666666666666888888888888887777788888888655555555577777766666667 PP

      AAA_22  92 ......ielliiDEaqh..lrseealeeL..rsllnlsrkgvqli 126
                        +++i DEa+   l + ++l  L  + l+   r +++li
  KHJ34748.1 410 epdldrYSCVIMDEAHEraL-NTDVLMGLfkKVLSR--RRDLKLI 451
                 77778778999999998444.444444443444555..6666666 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   4.1e-06    0.0046     116     150 ..     309     339 ..     217     342 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 4.1e-06
       T2SSE 116 ekiaevlrkavrerglilvsGgTgsGKttllyall 150
                 e++     + +r +++i+v G TgsGKtt l   l
  KHJ34748.1 309 EDLL----RVIRDNQVIIVVGETGSGKTTQLTQFL 339
                 3333....44566699*************997665 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0     9e-06      0.01      16     110 ..     317     439 ..     308     453 .. 0.68

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 9e-06
      AAA_30  16 sgdrvavltGpAGtGKttalkal..reaweaag.......grviglAptgkaAkvLaeelgieastiakllkrlk..................grarle 87 
                 + ++v +++G  G+GKtt l++   ++ + + g       +rv++++  ++++++++ +lg +     ++ + +                   ++ +l+
  KHJ34748.1 317 D-NQVIIVVGETGSGKTTQLTQFlyEDGYGDIGligctqpRRVAAMSVAKRVSEEMECKLGSTVGYAIRFEDCTSketiikymtdgvllreslNEPDLD 414
                 4.469*************9998744555555559***********************766642222222222222333444444556777777668899 PP

      AAA_30  88 pgtllivDEagmv..dtkqlaallk 110
                 + +++i DEa     +t+ l  l+k
  KHJ34748.1 415 RYSCVIMDEAHERalNTDVLMGLFK 439
                 99*******9643225555555555 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   1.3e-05     0.015       9     130 ..     317     446 ..     311     452 .. 0.65

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.3e-05
      AAA_19   9 kekvllvtaGpGtGKTrvlkhival.....lvelggvkpeeillvaftgrAakelrerlaalgaeatTiHrlalldfddlltealelle.........e 93 
                  ++v++v++  G+GKT+ l++ + +     +  +g  +p++++++++++r  +e++ +l +  + a  +           ++++ ++++         e
  KHJ34748.1 317 DNQVIIVVGETGSGKTTQLTQFLYEdgygdIGLIGCTQPRRVAAMSVAKRVSEEMECKLGSTVGYAIRFEDC--------TSKE-TIIKymtdgvllrE 406
                 6899***************99875422222445566677999999999999999999884444444444433........2111.11122223444447 PP

      AAA_19  94 aeeekklqeee.llivDEfqd..vd.elqyrLlkallgekk 130
                 + +e +l +++ ++i DE+ +  ++ ++ + L+k++l ++ 
  KHJ34748.1 407 SLNEPDL-DRYsCVIMDEAHEraLNtDVLMGLFKKVLSRRR 446
                 7778889.6666******98633556777788888876654 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   3.2e-05     0.036      16      43 ..     315     342 ..     309     363 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.2e-05
      ATPase  16 ipegrvvlitGepGtGKtifalqFlikg 43 
                 i +++v+ ++Ge+G+GKt+   qFl++ 
  KHJ34748.1 315 IRDNQVIIVVGETGSGKTTQLTQFLYED 342
                 67899*********************86 PP

>> GAD  GAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   9.9e-05      0.11      50      89 ..     483     522 ..     450     528 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 9.9e-05
                 SGGEETTTCCCS-HHHHHHHHHHCT--TTEEEEEEEEEHH CS
         GAD  50 gegltgpiakflteeevkklleavgaeegDillfvAdkkk 89 
                   ++++p+  ++++++++ l+  v+++ gDil+f  ++++
  KHJ34748.1 483 VMFHKSPVEDYVDQAVQQVLAIHVSMSSGDILVFMTGQED 522
                 5689*******************************99876 PP

>> Flavi_DEAD  Flavivirus DEAD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   8.7e-05     0.098      36     106 ..     358     426 ..     315     462 .. 0.65

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 8.7e-05
                 EEEEESSHHHHHHHHHHTTTS-EEE-------------SEEEEEHHHHHHHHHHT------SEEEEETTT- CS
  Flavi_DEAD  36 tlvLaPtrvvlaemeealkglevryktsavkeektgrelvdvmchatftkrllspvrkknyeliimDeahf 106
                    ++ ++ v +eme  l g++v y  +  ++ ++++ ++  m    + +  l++    +y  +imDeah 
  KHJ34748.1 358 VAAMSVAKRVSEEMECKL-GSTVGYAIRF-EDCTSKETIIKYMTDGVLLRESLNEPDLDRYSCVIMDEAHE 426
                 333344444555555544.4456665543.47778999********************************5 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.1   0.00034      0.38       2      99 ..     318     454 ..     317     469 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00034
      AAA_14   2 rkilvitGaRrvGKTtllkqlikell.........vkkesilyinldderd.................kkladpe.....kllelileklke....... 62 
                 +++++++G   +GKTt l q+++e           ++++++  +++ +                    +     +     ++++++ +   +       
  KHJ34748.1 318 NQVIIVVGETGSGKTTQLTQFLYEDGygdigligcTQPRRVAAMSVAKRVSeemecklgstvgyairfE-----DctskeTIIKYMTD---Gvllresl 408
                 789******************999887888888877777777777776555556666666666444331.....12222233333333...03333466 PP

      AAA_14  63 .....ekktylflDEiqevpewekalkslvd....egknldvivtG 99 
                      ++ +++++DE++e     ++l +l++    ++++l++ivt 
  KHJ34748.1 409 nepdlDRYSCVIMDEAHERALNTDVLMGLFKkvlsRRRDLKLIVTS 454
                 6678878889999999998777777766666444355777888775 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   0.00023      0.26       2      59 ..     319     375 ..     318     466 .. 0.68

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00023
                 EEEEEEESTTSSHHHHHHHHHHHHHHT.TS-EEEEEESTSSTTHHHHHHHHHHHTTEEE CS
       SRP54   2 nvillvGlqGaGKTttlaKLaallkke.gkkvllvaaDtfRaaAveQLktlaeklgvpv 59 
                 +vi++vG +G+GKTt l++    +++  g   l+ ++   R+aA+   k + e+++ ++
  KHJ34748.1 319 QVIIVVGETGSGKTTQLTQFL--YEDGyGDIGLIGCTQPRRVAAMSVAKRVSEEMECKL 375
                 69*************998864..444436666677777888888887777777776654 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.3       2.8   3.1e+03      52      92 ..     212     276 ..     203     298 .. 0.55
   2 ?   10.2   0.0   0.00075      0.84       9      30 ..     316     337 ..     311     400 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 2.8
                 B-HHHCCHCEEEE-SS--S-TTSB.HHHH...........................HHHTCHHHHHHHS CS
                 xxxxxxxxxxxxxxxxxxxxxxxx.xxxx...........................xxxxxxxxxxxxx RF
    ABC_tran  52 qeleslrkeigvlpqepqlfpelt.vren...........................esdeeiekalskl 92 
                 +   ++rk ++v++++ q +++ + ++e                            e    +e+  sk+
  KHJ34748.1 212 DMAVFSRKGSRVVKEKRQQKERQKqAQEAtniagttlgnimnireeegdsagsipgE----VEQSNSKF 276
                 556677888888888855555544255557777777777777666555544444331....23322222 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00075
                 ETTSEEEEEESTTSSHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   9 kegekvaivGenGaGKStLlkl 30 
                 + ++++ +vGe+G+GK+t l  
  KHJ34748.1 316 RDNQVIIVVGETGSGKTTQLTQ 337
                 678999************7654 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.2      0.01        12      21      44 ..     306     338 ..     229     341 .. 0.79
   2 ?    7.9   0.0    0.0025       2.7     122     169 ..     405     457 ..     378     459 .. 0.71
   3 ?   -2.4   1.5       3.7   4.1e+03      67     121 ..     960     996 ..     929    1016 .. 0.42

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.01
                 ...........TTSEEEEEESTTSTHHHHHHHH CS
      ResIII  21 s.........krdkrglikmaTGtGKTlvaakl 44 
                 +         ++++ ++++ +TG+GKT  ++++
  KHJ34748.1 306 AvredllrviRDNQVIIVVGETGSGKTTQLTQF 338
                 0444455555677788899********987766 PP

  == domain 2  score: 7.9 bits;  conditional E-value: 0.0025
                 .....HHHTTT-SEEEEETGGGTTS.T.....TTHHHHHT---SEEEEEESS- CS
      ResIII 122 eeeseellrdrfdviiiDEaHrlgakk.....swreilekfkeavllglTATp 169
                 +e  +e + dr+ ++i+DEaH  + ++      ++++l   ++ +l+  +AT+
  KHJ34748.1 405 RESLNEPDLDRYSCVIMDEAHERALNTdvlmgLFKKVLSRRRDLKLIVTSATM 457
                 56678899999**********87775344555666666666666666666665 PP

  == domain 3  score: -2.4 bits;  conditional E-value: 3.7
                 HHHHHHHGGGGTGG....GEEEESSS-B--............-SEEEEEHHHHHHTH... CS
      ResIII  67 leqtleefkkflseaykeigkkvsgdkkka.....kekdstnkkilvttiqsldadseee 121
                 leq  e                       +     ++k++ n+  lv++ +sl a  +++
  KHJ34748.1 960 LEQNHE-----------------------QvtcslENKKKINSPSLVFSSSSLIATVTTD 996
                 223333.......................1344443333333333333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1031 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1240  (0.0691617); expected 358.6 (0.02)
Passed bias filter:                      599  (0.0334096); expected 358.6 (0.02)
Passed Vit filter:                        82  (0.0045736); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.84u 0.25s 00:00:01.08 Elapsed: 00:00:00.40
# Mc/sec: 7756.58
//
Query:       KHJ34749.1  [L=74]
Description: hypothetical protein EV44_g5463 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       218  (0.0121591); expected 358.6 (0.02)
Passed bias filter:                      197  (0.0109878); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.32u 0.22s 00:00:00.54 Elapsed: 00:00:00.34
# Mc/sec: 649.87
//
Query:       KHJ34750.1  [L=109]
Description: hypothetical protein EV44_g3530 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.38
# Mc/sec: 862.13
//
Query:       KHJ34751.1  [L=111]
Description: hypothetical protein EV44_g3212 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       368  (0.0205254); expected 358.6 (0.02)
Passed bias filter:                      293  (0.0163422); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.21s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 904.87
//
Query:       KHJ34752.1  [L=1185]
Description: putative serine threonine protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-62  211.8   0.0    2.4e-62  210.7   0.0    1.6  2  Pkinase        Protein kinase domain
    2.7e-34  118.6   0.0    6.9e-29  100.9   0.0    2.3  2  Pkinase_Tyr    Protein tyrosine kinase
    5.5e-07   29.2   0.0     0.0008   18.8   0.0    2.2  2  Kinase-like    Kinase-like
     0.0075   16.2   0.0      0.014   15.3   0.0    1.4  1  APH            Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.021   13.8   0.1      0.037   13.0   0.1    1.3  1  Haspin_kinase  Haspin like kinase domain
       0.13   11.6   0.0       0.26   10.6   0.0    1.4  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  210.7   0.0     8e-66   2.4e-62       5     264 .]     319     609 ..     315     609 .. 0.94
   2 ?   -3.3   0.0       1.5   4.4e+03     140     167 ..     671     698 ..     671     706 .. 0.84

  Alignments for each domain:
  == domain 1  score: 210.7 bits;  conditional E-value: 8e-66
                 EEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH..HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHHH CS
     Pkinase   5 eklGeGsfGkVykaveketgkivAvKkikkekakkkke..kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeeak 101
                  +lGeG+fGkV  + ++e g +vA+K i++++   +     k+ rEi+il+ ++hpnivrl e++++++++ ++ley++ggel+d++ +++ l ++ a+
  KHJ34752.1 319 GTLGEGEFGKVKMGWKQEGGVQVAIKLIRRDNVGANPSrlAKIHREIAILEGISHPNIVRLHEMVQTEKQIGIILEYASGGELFDYILNHRYLGDNAAR 417
                 68*****************************9988777789********************************************************** PP

                 HHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.................................BCTTTSCGGGS-HH CS
     Pkinase 102 kiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.................................ltsfvgtseYlAPE 167
                 ++++q+++g+ ylH+kgi+HrDlK eN+L+d++ ++ itDFG+a+ ++ + +                                 +++ +g++ Y APE
  KHJ34752.1 418 RLFAQLVSGVGYLHNKGIVHRDLKLENLLLDRNCNIIITDFGFANTFNAKDElgeeieynltnkdfvkkleldkilpdghrrgdlMQTSCGSPCYAAPE 516
                 *************************************************999*********************************************** PP

                 HH.TTSCB.SHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 168 vl.keney.skkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 ++ +++ y ++kvDvWs+Gvily +l+g  pf ++  +     e d++  ++k +  ++  l  ++ +s++a+dll+++l  dp+kR    e+ +h++l
  KHJ34752.1 517 LVvSDSLYtGRKVDVWSCGVILYAMLAGYLPFDDDPAN----PEGDNINLLYKYI--VSTPLTFPDYVSPHARDLLRRILVPDPRKRADLFEVARHSWL 609
                 **9666666************************44444....4777755556654..56789999*********************************7 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.5
                 -SGTTSEESSSSCSBCTTTSCGGGS-HH CS
     Pkinase 140 tDFGlakelessskltsfvgtseYlAPE 167
                 tD+ l++  ++s++ + +++  eY+AP+
  KHJ34752.1 671 TDLELSESRKTSKDNKRRTVQVEYVAPR 698
                 5788888888888899999999****97 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.9   0.0   2.3e-32   6.9e-29       5     159 ..     319     470 ..     316     481 .. 0.91
   2 !   15.2   0.0   3.3e-06    0.0098     169     255 ..     510     603 ..     498     606 .. 0.79

  Alignments for each domain:
  == domain 1  score: 100.9 bits;  conditional E-value: 2.3e-32
                  EEEEEESSEEEEEEEEETTTTSSEEEEEEEEEST...TSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTT CS
  Pkinase_Tyr   5 kklGeGafGkVvegtlkgekekkevkVavKtlke...eateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekek 99 
                   +lGeG+fGkV +g  +    +  v+Va+K +++   +a+ ++ +++ +e++i++ ++hpniv+l+ ++  e+++ i++ey++gG+L +++ ++  + 
   KHJ34752.1 319 GTLGEGEFGKVKMGWKQ----EGGVQVAIKLIRRdnvGANPSRLAKIHREIAILEGISHPNIVRLHEMVQTEKQIGIILEYASGGELFDYILNH--RY 410
                  68***********9877....999********65233677888999***********************************************9..99 PP

                  SBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE CS
  Pkinase_Tyr 100 ltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey 159
                  l  +   ++ +q+ +G+ yL++k +vHrdl   N Ll++n  + i+DfG a++ + +de 
   KHJ34752.1 411 LGDNAARRLFAQLVSGVGYLHNKGIVHRDLKLENLLLDRNCNIIITDFGFANTFNAKDEL 470
                  999999**********************************************99877765 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 3.3e-06
                  GGGS-HHHHHHSE.EE.HHHHHHHHHHHHHHHHTTSSGT......TTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 169 vkWmapEslkekk.ft.sksDvWsfGvllwEiftlgesp......ypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfsel 255
                    + apE + + + +t  k DvWs Gv+l+ ++  g  p       p+ +n ++l k+  ++ l+ p++++++  +l+++ +  dp++R+++ e+
   KHJ34752.1 510 PCYAAPELVVSDSlYTgRKVDVWSCGVILYAMLA-GYLPfdddpaNPEGDNINLLYKYIVSTPLTFPDYVSPHARDLLRRILVPDPRKRADLFEV 603
                  5699***876655355379*************99.99994444444555666678888888999*************************988766 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   2.7e-07    0.0008     138     190 ..     408     460 ..     398     485 .. 0.86
   2 !    8.1   0.0   0.00048       1.4     207     254 ..     512     552 ..     497     597 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 2.7e-07
  Kinase-like 138 hkkletiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggfta 190
                  h+ l++ a   l +ql+  + +L++kg+vh +++ +nllld++  +++++f+ 
   KHJ34752.1 408 HRYLGDNAARRLFAQLVSGVGYLHNKGIVHRDLKLENLLLDRNCNIIITDFGF 460
                  6777777777778*************************************975 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00048
  Kinase-like 207 faPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPltlat 254
                  +a pEl+ s   yt         k+d+W  G+  y + + +lP++ + 
   KHJ34752.1 512 YAAPELVVSDSLYT-------GRKVDVWSCGVILYAMLAGYLPFDDDP 552
                  55566655544433.......4689*******************9864 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   4.8e-06     0.014     150     196 ..     413     461 ..     355     465 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 4.8e-06
                 HHHHHHHHHH--S....SS-EEEE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 150 eqvlaalaallpg....elptvllHgDlhpgNllvdpddgrvtGviDfeda 196
                 ++++++l a l +       ++++H+Dl++ Nll+d ++  +  + Df++a
  KHJ34752.1 413 DNAARRLFAQLVSgvgyLHNKGIVHRDLKLENLLLD-RNCNI-IITDFGFA 461
                 4477788888888899999*****************.55555.37799987 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   1.3e-05     0.037     229     254 ..     436     461 ..     370     482 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.3e-05
  Haspin_kinase 229 EHRdLhldniLvdknlnvtlidlkls 254
                     HRdL+l+n L+d+n n+++ d+  +
     KHJ34752.1 436 VHRDLKLENLLLDRNCNIIITDFGFA 461
                    5*********************9876 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   8.6e-05      0.26     105     165 ..     401     457 ..     368     465 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 8.6e-05
         Kdo 105 LedllakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliD 165
                 L d++ +++ l+++  r+l+ ++   +  lh+ g+ H+dl   n+ll+ +     +i++ D
  KHJ34752.1 401 LFDYILNHRYLGDNAARRLFAQLVSGVGYLHNKGIVHRDLKLENLLLDRNC----NIIITD 457
                 5566666788999999*******************************9875....555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1185 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       669  (0.0373138); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.74u 0.25s 00:00:00.99 Elapsed: 00:00:00.41
# Mc/sec: 8722.25
//
Query:       KHJ34753.1  [L=596]
Description: putative wd repeat-containing protein slp1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-17   64.1   5.0    1.3e-06   28.6   0.1    4.4  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
      3e-15   56.4  20.7      0.002   18.9   0.2    6.8  7  WD40         WD domain, G-beta repeat
    5.6e-06   25.5   0.1    0.00048   19.2   0.0    3.3  3  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
    9.6e-06   25.6   0.1     0.0065   16.4   0.1    2.5  2  eIF2A        Eukaryotic translation initiation factor eIF2A


Domain annotation for each model (and alignments):
>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.6   0.1   2.9e-10   1.3e-06      29      91 ..     315     376 ..     283     377 .. 0.87
   2 !   21.5   0.2   4.6e-08   0.00021      23      90 ..     394     459 ..     391     460 .. 0.91
   3 !   11.6   0.1     6e-05      0.27      32      90 ..     444     503 ..     440     505 .. 0.84
   4 !    7.8   0.0   0.00091       4.1      35      81 ..     535     581 ..     518     593 .. 0.83

  Alignments for each domain:
  == domain 1  score: 28.6 bits;  conditional E-value: 2.9e-10
  ANAPC4_WD40  29 vwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWge 91 
                  v +l e+++d  v+s++W+ dg    v+   ge+++ d+e+g+ ++s++ +++ +v  +gW++
   KHJ34753.1 315 VNSLLETSPDTYVSSVKWSGDGAYVSVGLGTGEIQIWDVEEGTKLRSMHGHDT-RVGVMGWNK 376
                  4444788999**************************************99998.6******86 PP

  == domain 2  score: 21.5 bits;  conditional E-value: 4.6e-08
  ANAPC4_WD40  23 RlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  R+  +++ +l   ++ sev +L+W+ dg  La + +d+ v++ da s  v +  +++++ av+ l+W+
   KHJ34753.1 394 RIAQHKIAEL--VSHVSEVCGLEWRSDGVQLATGGNDNLVSIWDARSLSVPKFTKTNHKAAVKALSWC 459
                  6667777777..67889***************************************9999*******6 PP

  == domain 3  score: 11.6 bits;  conditional E-value: 6e-05
  ANAPC4_WD40  32 leedkedsevrsLaWkp.dgklLava..ysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  +++++++  v++L+W p + +lLa +    d ++++ +  +g  v+s++++s+  vt+l W+
   KHJ34753.1 444 FTKTNHKAAVKALSWCPwQPNLLATGggSYDRHIHFWNTTTGARVNSIDTGSQ--VTSLRWS 503
                  5678999********99456899986224689*******************99..******7 PP

  == domain 4  score: 7.8 bits;  conditional E-value: 0.00091
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  ++++s+v + + +pdg++La a +d ++++ ++ ++k+  s+s++s 
   KHJ34753.1 535 PAHESRVLHSCLSPDGQMLATAAADESLKFWKIFEKKLGLSSSTSSC 581
                  678889999999*****************999999888777666665 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.55   2.5e+03      19      38 .]     292     309 ..     287     309 .. 0.70
   2 !   11.1   0.2   0.00013      0.58      13      38 .]     327     352 ..     313     352 .. 0.86
   3 ?   -0.7   0.1       0.7   3.1e+03       2      28 ..     357     382 ..     356     395 .. 0.56
   4 !   18.9   0.2   4.4e-07     0.002       5      38 .]     401     435 ..     397     435 .. 0.91
   5 !   13.7   0.2     2e-05      0.09       8      38 .]     447     481 ..     440     481 .. 0.75
   6 !    7.3   0.2    0.0021       9.5      12      37 ..     496     523 ..     484     523 .. 0.80
   7 !   14.7   0.0   9.3e-06     0.041       8      38 .]     535     566 ..     529     566 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.55
                 ETTSSEEEEEETTSEEEEEE CS
        WD40  19 spdgawlasGsdDgtvriWd 38 
                 s+ ++  a G   ++++iW+
  KHJ34753.1 292 SSGNQV-AIGL-ERSIYIWS 309
                 444444.5688.9******5 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00013
                 EEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40  13 vtslafspdgawlasG.sdDgtvriWd 38 
                 v+s+++s dga+++ G +  g + iWd
  KHJ34753.1 327 VSSVKWSGDGAYVSVGlG-TGEIQIWD 352
                 99***********99*88.*******9 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.7
                 EEEEEEESS.SS..EEEEEEETTSSEEEEE CS
        WD40   2 qclrtltGH.ss..vtslafspdgawlasG 28 
                 ++lr+  GH +   v +     +++ l+sG
  KHJ34753.1 357 TKLRSMHGHdTRvgVMGW----NKHNLSSG 382
                 678999999555333333....33335555 PP

  == domain 4  score: 18.9 bits;  conditional E-value: 4.4e-07
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  +l  H s v++l + +dg  la+G+ D+ v iWd
  KHJ34753.1 401 AELVSHvSEVCGLEWRSDGVQLATGGNDNLVSIWD 435
                 56789*999*************************9 PP

  == domain 5  score: 13.7 bits;  conditional E-value: 2e-05
                 ESS.SSEEEEEEETTSSEE.EEE..ETTSEEEEEE CS
        WD40   8 tGH.ssvtslafspdgawl.asG..sdDgtvriWd 38 
                 t H   v +l+++p ++ l a+G  s+D+++++W+
  KHJ34753.1 447 TNHkAAVKALSWCPWQPNLlATGggSYDRHIHFWN 481
                 57855599**88888888625764469*******8 PP

  == domain 6  score: 7.3 bits;  conditional E-value: 0.0021
                 SEEEEEEETTSSEEEEEET..TSEEEEE CS
        WD40  12 svtslafspdgawlasGsd..DgtvriW 37 
                  vtsl++sp+ + ++s s   D+++ iW
  KHJ34753.1 496 QVTSLRWSPHFREIVSTSGfpDNSLSIW 523
                 5************98655446******* PP

  == domain 7  score: 14.7 bits;  conditional E-value: 9.3e-06
                 ESS.SSE..EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   8 tGH.ssv..tslafspdgawlasGsdDgtvriWd 38 
                  +H s v  ++l  spdg++la++  D ++++W+
  KHJ34753.1 535 PAHeSRVlhSCL--SPDGQMLATAAADESLKFWK 566
                 689777854455..********9988*******6 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.042   1.9e+02     179     217 ..     316     354 ..     302     378 .. 0.81
   2 ?   -0.1   0.0      0.08   3.6e+02     183     215 ..     402     435 ..     372     451 .. 0.79
   3 !   19.2   0.0   1.1e-07   0.00048     186     219 ..     537     570 ..     433     593 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.042
    Ge1_WD40 179 egllkieehsliveaafspdGtalatasedGevkffqvy 217
                 ++ll+ + ++ +++  +s dG+ +++    Ge++ + v 
  KHJ34753.1 316 NSLLETSPDTYVSSVKWSGDGAYVSVGLGTGEIQIWDVE 354
                 56778888899999********************99984 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.08
    Ge1_WD40 183 kieeh.sliveaafspdGtalatasedGevkffq 215
                 ++ +h s++    + +dG  lat  +d +v  + 
  KHJ34753.1 402 ELVSHvSEVCGLEWRSDGVQLATGGNDNLVSIWD 435
                 444442688888999************9999885 PP

  == domain 3  score: 19.2 bits;  conditional E-value: 1.1e-07
    Ge1_WD40 186 ehsliveaafspdGtalatasedGevkffqvyle 219
                 ++s + ++ +spdG  lata++d  +kf++++ +
  KHJ34753.1 537 HESRVLHSCLSPDGQMLATAAADESLKFWKIFEK 570
                 33679**************************975 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.0    0.0014       6.1      99     146 ..     323     367 ..     300     381 .. 0.72
   2 !   16.4   0.1   1.5e-06    0.0065      62     178 ..     410     525 ..     372     534 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0014
                 EEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT- CS
       eIF2A  99 eeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaana 146
                    +  ++++s  g +v + G+g   Ge++iwdv++ +k+ +++  ++
  KHJ34753.1 323 PDTYVSSVKWSGDGAYVSV-GLG--TGEIQIWDVEEGTKLRSMHGHDT 367
                 345667899*****99976.687..59********9999998876665 PP

  == domain 2  score: 16.4 bits;  conditional E-value: 1.5e-06
                 EEEEEE-TTSS-EEEEESSSSCEEEEEECSCEEEEEEEE....ES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-.TT--EEEE-TTS CS
       eIF2A  62 ihdvaWspkskefaviyGkmpakvslfdlkvkvisklee....qkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaea.anatlvewspdg 155
                 +  ++W +++ ++    G  ++ vs++d +   + k+ +    ++  ++ ++p +  +l  G g+   ++ +w++++   +++++  ++ t++ wsp+ 
  KHJ34753.1 410 VCGLEWRSDGVQL--ATGGNDNLVSIWDARSLSVPKFTKtnhkAAVKALSWCPWQPNLLATGGGSYDRHIHFWNTTTGARVNSIDTgSQVTSLRWSPHF 506
                 7777787776665..5899**********955555554400004456889***9999999999*************9999999976378999******* PP

                 SEEEEEE-TTT-SSS-EEEEEET CS
       eIF2A 156 ryvlTattaprlrvdngfkiwsy 178
                 r ++  + +p    dn++ iw y
  KHJ34753.1 507 REIVSTSGFP----DNSLSIWLY 525
                 *999999997....899999977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (596 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       331  (0.0184617); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 4340.10
//
Query:       KHJ34754.1  [L=327]
Description: putative gtp-binding protein ypt4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.4e-43  147.0   0.0    7.2e-43  146.0   0.0    1.5  1  Ras          Ras family
    1.2e-29  102.9   0.0    2.2e-29  102.1   0.0    1.4  1  Roc          Ras of Complex, Roc, domain of DAPkinase
    3.1e-12   46.3   0.0    3.4e-11   42.9   0.0    2.1  2  Arf          ADP-ribosylation factor family
    2.3e-05   23.9   0.0    3.1e-05   23.5   0.0    1.2  1  Gtr1_RagA    Gtr1/RagA G protein conserved region
    4.8e-05   23.4   0.0    8.9e-05   22.5   0.0    1.5  1  MMR_HSR1     50S ribosome-binding GTPase
    0.00012   21.6   0.0     0.0005   19.7   0.0    1.9  1  GTP_EFTU     Elongation factor Tu GTP binding domain
     0.0029   17.0   0.0     0.0046   16.4   0.0    1.3  1  SRPRB        Signal recognition particle receptor beta subuni
  ------ inclusion threshold ------
      0.011   15.9   0.0       0.02   15.0   0.0    1.5  1  AAA_33       AAA domain
      0.024   15.1   0.1      0.089   13.3   0.0    1.8  2  ABC_tran     ABC transporter
      0.028   14.3   0.2       0.16   11.8   0.1    2.1  2  RsgA_GTPase  RsgA GTPase
      0.047   13.9   0.0      0.077   13.2   0.0    1.4  1  AAA_28       AAA domain
      0.057   13.3   0.0        0.1   12.5   0.0    1.4  1  NACHT        NACHT domain
      0.058   13.1   0.0       0.15   11.9   0.0    1.7  1  AAA_29       P-loop containing region of AAA domain
      0.068   13.4   0.0       0.15   12.3   0.0    1.6  1  AAA_22       AAA domain
      0.094   12.5   0.0       0.36   10.6   0.0    1.9  2  PduV-EutP    Ethanolamine utilisation - propanediol utilisati
      0.097   11.8   0.1        1.1    8.3   0.0    2.1  2  G-alpha      G-protein alpha subunit
      0.098   13.0   0.3       0.22   11.9   0.1    1.7  2  AAA_16       AAA ATPase domain
       0.18   11.4   0.1        2.4    7.7   0.0    2.2  2  cobW         CobW/HypB/UreG, nucleotide-binding domain


Domain annotation for each model (and alignments):
>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.0   0.0   7.2e-46   7.2e-43       1     161 [.      32     250 ..      32     251 .. 0.98

  Alignments for each domain:
  == domain 1  score: 146.0 bits;  conditional E-value: 7.2e-46
                 EEEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEET....TEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHH CS
         Ras   1 KlvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievd....gkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwve 95 
                 K++l+G s+ GK++ll+rfvk++++  + +Tigv+f +k i+v      k++k+++wDTAG e+f+s+ ++yyr+a g+llvydi+s ++f++++++++
  KHJ34754.1  32 KIILLGPSGSGKSCLLHRFVKNEWRVLSSQTIGVEFASKIIKVGsgsrRKRIKFQLWDTAGTERFRSVSRSYYRSAAGALLVYDISSYNTFTSLSSFIH 130
                 89*****************************************9888899************************************************* PP

                 HHHHHSTTTSEEEEEEETTTGGG.....................................................G-SS-HHHHHHHHHHHT.SEEEE CS
         Ras  96 eikrvaeenvpivLvGnKvDlee.....................................................kravsteegeelakelg.lkfle 140
                 + +  a+ n++i+LvGnK Dl++                                                      r+v t+e++++a+ ++ ++ +e
  KHJ34754.1 131 DARALASPNLAILLVGNKLDLADqgdlidvgssnqytdtseissfketenfsnlavgslnsnfgldskwtasvasdGREVATDEASKWASANNiTATVE 229
                 *********************************************************************************************8899** PP

                 EBTTTTCTHHHHHHHHHHHHH CS
         Ras 141 tSAktnenveeafeellreil 161
                 +SA + env+eaf++l+r il
  KHJ34754.1 230 ASALSGENVDEAFNRLARIIL 250
                 ****************99875 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.1   0.0   2.2e-32   2.2e-29       1     120 []      32     151 ..      32     151 .. 0.89

  Alignments for each domain:
  == domain 1  score: 102.1 bits;  conditional E-value: 2.2e-32
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEE...GHHHHCHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvyd...srssenlk 96 
                 K++l+G sg+GK++ll+rfv+++ +  +++tigv+f++k + k+    + ++ k++k+++WDtaG erfrs+ ++y+r+aa a+lvyd    +++++l+
  KHJ34754.1  32 KIILLGPSGSGKSCLLHRFVKNEWRVLSSQTIGVEFASKII-KV---GSGSRRKRIKFQLWDTAGTERFRSVSRSYYRSAAGALLVYDissYNTFTSLS 126
                 9************************************9965.44...44566789*********************************64344678999 PP

                 HHHHHHHHHCSSS.-EEEEEE-TTT CS
         Roc  97 eWlkelkkvagks.pvilvgnkiDl 120
                 + +++ ++ a+ +  ++lvgnk+Dl
  KHJ34754.1 127 SFIHDARALASPNlAILLVGNKLDL 151
                 ********9885538899*****95 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   0.0   3.4e-14   3.4e-11      15     130 ..      31     154 ..      20     185 .. 0.83
   2 ?    1.2   0.0      0.23   2.2e+02     152     173 ..     226     247 ..     201     249 .. 0.80

  Alignments for each domain:
  == domain 1  score: 42.9 bits;  conditional E-value: 3.4e-14
                 EEEEEEESTTSSHHHHHHHHHHSSCEE.CSSSSS..EEEEEEEE......TTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHH CS
         Arf  15 lrilllGLDnaGKtTilkklkleelvt.tvPTig..fnveelei......knlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleeakeeL 104
                 ++i+llG  ++GK+ +l+++ ++e     + Tig  f ++ +++      k +kf++wD  G e+ R++ ++Y+++  + + v D +  + +++ ++ +
  KHJ34754.1  31 AKIILLGPSGSGKSCLLHRFVKNEWRVlSSQTIGveFASKIIKVgsgsrrKRIKFQLWDTAGTERFRSVSRSYYRSAAGALLVYDISSYNTFTSLSSFI 129
                 79******************9999876466787733566777778899999*************************************99998877776 PP

                 HHHCTSGCCTTSEEEEEEE-TTSTTS CS
         Arf 105 kalleeeelkevallvlaNKqDlpea 130
                 +         + a+l+++NK Dl+++
  KHJ34754.1 130 HDAR-ALASPNLAILLVGNKLDLADQ 154
                 6643.333448889999*****9876 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.23
                 EEEEEBTTTTBTHHHHHHHHHH CS
         Arf 152 eiqkcsavkgeglkeglewlse 173
                   +++sa++ge+++e++++l++
  KHJ34754.1 226 ATVEASALSGENVDEAFNRLAR 247
                 557899*************986 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   3.1e-08   3.1e-05       1     148 [.      32     176 ..      32     203 .. 0.72

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 3.1e-08
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsiiFdn...ylardtlrlgatidvek.sevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesreleedl 95 
                 k++L+G+sgsGK+++     +n   +l  +t+ ++ ++++ k  +    + ++++lwD  G+e+f   +    +++  +  g+l  V D++s    +++
  KHJ34754.1  32 KIILLGPSGSGKSCLLHRFVKNewrVLSSQTIGVEFASKIIKvGSGSRRKRIKFQLWDTAGTERFRSVS----RSYYRSAAGAL-LVYDISSY---NTF 122
                 89************9888777644467888888888877654144456789*************98875....55555556665.599***54...455 PP

   Gtr1_RagA  96 etlkeilealrq.yspeakvfvlihKmDliqedereeifeerkeeireeiekle 148
                 ++l++ ++ +r   sp++ +    +K+Dl ++    ++ ++++ + ++ei++++
  KHJ34754.1 123 TSLSSFIHDARAlASPNLAILLVGNKLDLADQGDLIDVGSSNQYTDTSEISSFK 176
                 666666666655258999999999****99887777776666555555555444 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   8.9e-08   8.9e-05       1      97 [.      32     129 ..      32     148 .. 0.67

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 8.9e-08
                 EEEEEESTTSSHHHHHHHHHTS..TEEESSSTTSSSSEEEEEEE....ETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETT.TTCSHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltge..kaivsdkpgtTrdinegrvk....lkgkeielvDtpGliegaseekglgkaflaleeadlillvvdas.eeklkp 92 
                 +++++G + +GKS L+ + +++  ++  s++ g+    + ++v      k+ +++l+Dt+G  e   + +++++++ +  +a  +llv d+s  ++++ 
  KHJ34754.1  32 KIILLGPSGSGKSCLLHRFVKNewRVLSSQTIGVEFASKIIKVGsgsrRKRIKFQLWDTAG-TE---RFRSVSRSYYR--SAAGALLVYDISsYNTFTS 124
                 5899****************986766666666655555555554444444488********.77...34478888875..6789999999884223444 PP

                 HHHHH CS
    MMR_HSR1  93 ldeel 97 
                 l + +
  KHJ34754.1 125 LSSFI 129
                 44433 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0     5e-07    0.0005      64     190 ..      68     247 ..      29     253 .. 0.70

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 5e-07
                 E.........TTCSSEEEEEEEESSSGGGHHHHHHHHHT-SEEEEEEETTTB.STHHHHHHHHHHHHTTTE...EEEEEESCGST.........HHHHH CS
    GTP_EFTU  64 e.........ketkkylinliDtPGHvdFskevirglrvlDgavlvvdaveG.vepqteevlrlalkegvp...iivfiNKmDrl.........kaelk 140
                           ++ k+ +++l Dt G + F +     +r + ga+lv d+++    +     ++ a+++  p   i ++ NK+D +          ++  
  KHJ34754.1  68 AskiikvgsgSRRKRIKFQLWDTAGTERFRSVSRSYYRSAAGALLVYDISSYnTFTSLSSFIHDARALASPnlaILLVGNKLDLAdqgdlidvgSSNQY 166
                 3344444455588999*************9877777*************976233344555666666666666488899******86555555422222 PP

                 HHHHHHHHHHHHH........................................HHHHHHHHHTTT.......TTEEEEEEBTTTTBTHHHHHHHHHH CS
    GTP_EFTU 141 eiveevkqklsrk........................................eeklekygekge.......kevpvvfgSalkgegvktllealve 190
                    +        +                                        +++                +++  v +Sal+ge+v++ ++ l +
  KHJ34754.1 167 TDTS--------EissfketenfsnlavgslnsnfgldskwtasvasdgrevaTDE--------AskwasanNITATVEASALSGENVDEAFNRLAR 247
                 2223........13344444778888888888888888888777777776664333........033333337999**********99987776655 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   4.6e-06    0.0046       5      65 ..      32      99 ..      28     124 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 4.6e-06
                EEEEE-STTSSHHHHHHHHHHSS--.-B---SS-EEETTG.........GGTT-SEEEETT-GCCSHH CS
       SRPRB  5 avllvGlsdsGKTslftrLttdsvk.ktvtSqessaalkv......ksekgskltliDfPGheklrqk 65
                +++l+G+s sGK  l++r  +++ +  +   +  ++a k+      + +k  k++l D  G e++r+ 
  KHJ34754.1 32 KIILLGPSGSGKSCLLHRFVKNEWRvLSSQTIGVEFASKIikvgsgSRRKRIKFQLWDTAGTERFRSV 99
                79******************995441233334556666666667766788999************974 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0     2e-05      0.02       2      33 ..      33      68 ..      33     137 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 2e-05
      AAA_33  2 vllvGlpGsGKstlaerllkklgavllssdt.....l 33
                ++l G++GsGKs l++r + k+ + +lss t     +
  KHJ34754.1 33 IILLGPSGSGKSCLLHRFV-KNEWRVLSSQTigvefA 68
                6899**************9.78899999888555541 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0     9e-05     0.089      13      35 ..      32      54 ..      28      88 .. 0.84
   2 ?   -1.1   0.0       2.5   2.5e+03      59     104 ..     184     240 ..     152     255 .. 0.52

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 9e-05
                EEEEEESTTSSHHHHHHHHTTSS CS
                xxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran 13 kvaivGenGaGKStLlkllagll 35
                k+ ++G++G+GKS Ll  + +++
  KHJ34754.1 32 KIILLGPSGSGKSCLLHRFVKNE 54
                688*************9887765 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 2.5
                 HCEEEE-SS--S-TTSBHHHH...............HHHTCHHHHHHHSTTGGTTCBGEST CS
                 xxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  59 keigvlpqepqlfpeltvren...............esdeeiekalsklglkelkdtvvks 104
                   +g l  +  l+++     +                + + ++++ ++++ + l  ++v++
  KHJ34754.1 184 LAVGSLNSNFGLDSKW----TasvasdgrevatdeaSKWASANNITATVEASALSGENVDE 240
                 3333333333333333....03333445554444333333355555555555555555544 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   0.00016      0.16      95     122 ..      25      53 ..       6      81 .. 0.78
   2 ?   -0.4   0.0      0.96   9.6e+02      44      65 ..     137     157 ..     120     186 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00016
                  HHCTT.SEEEEECSTTSSHHHHHHHHCTT CS
  RsgA_GTPase  95 ellkd.ktsvlvGqSGvGKStLinallpe 122
                  ++ +    ++l+G+SG GKS L+ +++ +
   KHJ34754.1  25 SMYDYlAKIILLGPSGSGKSCLLHRFVKN 53 
                  4444444589*************998876 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.96
                  HTT-EEEEEEE-GGG--HHHHH CS
  RsgA_GTPase  44 ekgiepvivlnKiDlleeeeel 65 
                  + ++ +++v nK+Dl+++ + l
   KHJ34754.1 137 SPNLAILLVGNKLDLADQGD-L 157
                  56778899999***999987.3 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   7.7e-05     0.077       1      86 [.      32     122 ..      32     141 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 7.7e-05
      AAA_28   1 kivitGgestGKTtlleaLaar.....gypvv.pEaareileeklakgedalpwvedllafa..ervleeqleeeaaaaankvlfcDrglldtl 86 
                 ki+++G++++GK+ ll ++ ++       +++  E+a +i++ ++ ++++ ++ +  l + a  er+    +  + + aa+ +l++D ++ +t+
  KHJ34754.1  32 KIILLGPSGSGKSCLLHRFVKNewrvlSSQTIgVEFASKIIKVGSGSRRKRIKFQ--LWDTAgtERFRSVSR-SYYRSAAGALLVYDISSYNTF 122
                 79******************88444554557788999999999998888766643..222222144444443.344445777777777776665 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0    0.0001       0.1       3      23 ..      33      53 ..      31      63 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.0001
                EEEEC-TTTCHHHHHHHHHHH CS
       NACHT  3 vilqGeaGsGKTtLlqklala 23
                +il G++GsGK+ Ll++++  
  KHJ34754.1 33 IILLGPSGSGKSCLLHRFVKN 53
                79***************9864 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00015      0.15      25      39 ..      33      47 ..      25      51 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00015
      AAA_29 25 tlltGpsGsGKSTll 39
                ++l GpsGsGKS ll
  KHJ34754.1 33 IILLGPSGSGKSCLL 47
                6899********997 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00015      0.15       8      29 ..      33      54 ..      31     115 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00015
      AAA_22  8 lvvtGesGtGKTtllrrlleql 29
                +++ G+sG+GK+ ll r++++ 
  KHJ34754.1 33 IILLGPSGSGKSCLLHRFVKNE 54
                6899**************9986 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00036      0.36       3      41 ..      32      72 ..      30      77 .. 0.79
   2 ?   -2.3   0.0       3.4   3.3e+03     111     141 ..     215     245 ..     206     247 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00036
   PduV-EutP  3 killiGkvgsGKttLtqalkgeelkYkktqai..efsdevi 41
                ki+l+G++gsGK  L +++ ++e +  + q+i  ef +++i
  KHJ34754.1 32 KIILLGPSGSGKSCLLHRFVKNEWRVLSSQTIgvEFASKII 72
                9***************9999888777666664226666666 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 3.4
   PduV-EutP 111 veelLksaGaekifevsavekegieellkyl 141
                 + ++ ++  ++   e sa++ e+++e ++ l
  KHJ34754.1 215 ASKWASANNITATVEASALSGENVDEAFNRL 245
                 5566666667777889999999999988876 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0    0.0011       1.1      24      43 ..      26      50 ..       3      55 .. 0.67
   2 ?    1.6   0.0      0.12   1.2e+02     181     241 ..      57     122 ..      48     135 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0011
                E.....EEEEEESTTSSHHHHHHHH CS
     G-alpha 24 v.....kllllGqseSGKsTilkql 43
                +     k++llG s+SGKs +l  +
  KHJ34754.1 26 MydylaKIILLGPSGSGKSCLLHRF 50
                144444*************999876 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.12
                 HHCS-----SEEEEEEEC.......T-TEEEEEEEE-SSHHHHHGTCCCTTTECEEEEEEEGGGTT-B CS
     G-alpha 181 ilkarlktvGisetkfev.......dsklefrivdvgGqrserkkWvpffddvdaiiFlvslsefdqv 241
                 +l ++  t+G++  +  +       ++ ++f+++d++G+   r    +++ ++   + +  +s ++  
  KHJ34754.1  57 VLSSQ--TIGVEFASKIIkvgsgsrRKRIKFQLWDTAGTERFRSVSRSYYRSAAGALLVYDISSYNTF 122
                 55555..55555444433558888867999*********99999999999999999999999999975 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   0.00022      0.22      27      61 ..      33      63 ..      29     158 .. 0.66
   2 ?   -2.5   0.0         6     6e+03      93     127 ..     214     249 ..     199     257 .. 0.50

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00022
      AAA_16 27 vllsGesGvGKsslvrellralekdggiflrgkcd 61
                ++l G+sG+GKs l+ ++ +    +++ +l+ ++ 
  KHJ34754.1 33 IILLGPSGSGKSCLLHRFVK----NEWRVLSSQTI 63
                689************77764....45666655554 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 6
      AAA_16  93 eleawrekleeala.avpelagaeasrllellkrll 127
                 e++ w+ +   +++ ++++l+g+     ++ l+r++
  KHJ34754.1 214 EASKWASANNITATvEASALSGENVDEAFNRLARII 249
                 444444433333334455666665544444444433 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7   0.0    0.0024       2.4       3      24 ..      33      54 ..      31      68 .. 0.88
   2 ?    1.0   0.0      0.29   2.8e+02     142     159 ..     141     158 ..     129     170 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.0024
                EEEEESTTCCHHHHHHHHHCT- CS
        cobW  3 tvltGflGsGKTtLlnhllenr 24
                ++l G+ GsGK+ Ll + ++n+
  KHJ34754.1 33 IILLGPSGSGKSCLLHRFVKNE 54
                6899*************99764 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.29
                 SSEEEEE-HHHHCHC..H CS
        cobW 142 adllvlnKtDlldeeall 159
                 a llv nK Dl+d+ +l+
  KHJ34754.1 141 AILLVGNKLDLADQGDLI 158
                 66899*******998654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       589  (0.0328518); expected 358.6 (0.02)
Passed bias filter:                      500  (0.0278878); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        18  (0.00100396); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 2516.86
//
Query:       KHJ34755.1  [L=395]
Description: putative transcription factor iia [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.1e-85  287.3  14.0    6.5e-85  286.6  14.0    1.3  1  TFIIA      Transcription factor IIA, alpha/beta subunit
     0.0054   16.3   0.1     0.0085   15.7   0.1    1.3  1  HMGL-like  HMGL-like
  ------ inclusion threshold ------
        1.2    8.4  10.2        1.7    7.9  10.2    1.2  1  DUF4407    Domain of unknown function (DUF4407)


Domain annotation for each model (and alignments):
>> TFIIA  Transcription factor IIA, alpha/beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  286.6  14.0   1.1e-88   6.5e-85       1     415 []       9     395 .]       9     395 .] 0.68

  Alignments for each domain:
  == domain 1  score: 286.6 bits;  conditional E-value: 1.1e-88
       TFIIA   1 vYrsvIedVIesvredFeeeGvdeqvLeeLkqlWesKllqskaaefpwdpkpeeaqspqfvlqlpqslkqalqasaaaasqapastsqslpslvipagk 99 
                 +Y+++I dVIes+r+dFee Gvd++vLe L+++W++Kl+q+++a fpwdpkpe +++ +++  + +++    q       +    ++q +p+    ++ 
  KHJ34755.1   9 IYQQIIADVIESSRVDFEEGGVDDSVLEALRKGWQTKLTQLDVAAFPWDPKPEVVPPFSNAPPSVSTNGGSYQ-------HI---NNQVAPQ----QP- 92 
                 6***************************************************996554444333322222221.......11...1111222....22. PP

       TFIIA 100 svqsltanssaataatfslpakleppvqipagvtlqtasgqlykvnv.....qasgaqqiaaqplqqvvqqsqgsaaqssvaalqaq.sqqaqalaepq 192
                         ++ + ++t+++++k+ep      g+++++ ++  y++++     +a+ aqq+aa++l+++    +g++a++s++a+q++ s+++q+ +  q
  KHJ34755.1  93 -------LQQVGLSSTNAPHIKTEP------GTENSSINQ--YSSQIsslphTATTAQQRAAAHLHNN----YGPRAAASINAIQQGaSHNQQGGPTFQ 172
                 .......223356788999999999......777777775..333333356699**************....**************9633333333333 PP

       TFIIA 193 qq.lekqqqq.qqqqqqqqqqqqvqqqqqeesqqaqqa.sqe......qvagsqvessqtdgaedaleeespvlegelsaeeeagaqkeelsreeidri 282
                 q  + +qqqq q qqqq  qq ++q+     +q++ ++  q+      + ++s + ++qtdg  ++ +      +    a+++ + +k +l r+eid++
  KHJ34755.1 173 QIqIMQQQQQlQLQQQQSAQQITQQE-----YQKKITPgDQNitnlqaSRPTSDLGNAQTDGVGNDFSL-----RDTDGASRAIKIDKITLCRTEIDSL 261
                 33223223332333322222222222.....22222222122222332444488889999999866665.....3333444444555788899999999 PP

       TFIIA 283 .re.............ealkakelekeskkkkraee.ssladlseilqlDGagddsdeeeeeeesdedsdsessddedeqveEDplNSd.DDvddeddd 365
                  r               ++  ++l++ +++ ++ ++ ss  +    +q+DG +dd+d+      +++d +         + +ED++NSd DD+d+  +d
  KHJ34755.1 262 iRTkvkamgtsiegggLMIPLRQLSNVARNPPQ-KKfSS--SSIITAQMDGGEDDDDD------IKYDGE---------NLDEDAINSDlDDPDEGLND 342
                 877888899889998844444434443333332.22122..345689**********9......667744.........379*************9999 PP

       TFIIA 366 dlfdtdn....vivCqYDKvhRsKNKWKftLKDGvmtvnGkdYVFsKAiGeaEW 415
                 d +d+++    +++C+YDKv+R+KNKWK+++KDGv+tvn+k+YVF+KA Ge+EW
  KHJ34755.1 343 D-DDDEDgmghIMLCMYDKVQRVKNKWKCVMKDGVLTVNNKEYVFHKASGEYEW 395
                 9.777779********************************************** PP

>> HMGL-like  HMGL-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   1.4e-06    0.0085     159     219 ..     102     163 ..      86     165 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.4e-06
                 T-SEEEEEETTS---HHHHHHHHHHHHHHS-..GGGEEEEEB-TTS-HHHHHHHHHHTT--E CS
   HMGL-like 159 GatriniaDtvGvltPneaaelisalkervk.dkvilsvHcHndlGlAvantlaAveaGadr 219
                 +a  i+     +  + n++  +is l +  +  +   + H Hn++G   a+++ A+++Ga++
  KHJ34755.1 102 NAPHIKTEPGTENSSINQYSSQISSLPHTATtAQQRAAAHLHNNYGPRAAASINAIQQGASH 163
                 5555555556666778899999999988877789999***********************86 PP

>> DUF4407  Domain of unknown function (DUF4407)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9  10.2   0.00029       1.7     108     236 ..      83     223 ..      80     237 .. 0.71

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00029
     DUF4407 108 Idaelaeeqqeeakelkeqlaaaltaelaeleaqiaalqaeidaaearldalraeaqkeldgtk...........gtgttgvaGkgpaakekkaqldaa 195
                 I+ ++a +q  ++  l+++ a + ++e  ++++ i++ +++i+++  +++++++ a+++l+++            ++g +  +  gp +++ + + +++
  KHJ34755.1  83 INNQVAPQQPLQQVGLSSTNAPHIKTEPGTENSSINQYSSQISSLPHTATTAQQRAAAHLHNNYgpraaasinaiQQGASHNQQGGPTFQQIQIMQQQQ 181
                 6666666666677777777777788999999******************************99999999999999889999999999999977777777 PP

     DUF4407 196 qaelaelkakld.atarlaalraelaeleaerakeraasqaa 236
                 q +l++ ++  +  +++ +++ +  ++  ++++++r +s+  
  KHJ34755.1 182 QLQLQQQQSAQQiTQQEYQKKITPGDQNITNLQASRPTSDLG 223
                 777777666633433333333333333334444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (395 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1865  (0.104021); expected 358.6 (0.02)
Passed bias filter:                      631  (0.0351944); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 2852.60
//
Query:       KHJ34756.1  [L=247]
Description: putative transcription initiation factor tfiid subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.7e-43  145.1   0.0    1.3e-42  144.7   0.0    1.2  1  TFIID-31kDa  Transcription initiation factor IID, 31kD subuni


Domain annotation for each model (and alignments):
>> TFIID-31kDa  Transcription initiation factor IID, 31kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.7   0.0   7.3e-47   1.3e-42       2     122 .]      44     187 ..      43     187 .. 0.97

  Alignments for each domain:
  == domain 1  score: 144.7 bits;  conditional E-value: 7.3e-47
  TFIID-31kDa   2 ekrPrdarlihliLaslgvteyeerVvlqLldfayrytssvLedAkvlaehakkke..................vslddvrlAiqsrlekqfkep... 78 
                  +krPrdarlihl+L+slg t+y+erV+lqLldfayr+ ssvL+dA++l+++a+ ++                  vs++ v+lAiqsrl++qf ++   
   KHJ34756.1  44 SKRPRDARLIHLLLSSLGCTAYQERVPLQLLDFAYRHSSSVLSDALHLSSDAYISQqvrardappgglqrddgqVSASTVQLAIQSRLQYQFGGGngs 141
                  689**************************************************9999***********************************998888 PP

  TFIID-31kDa  79 .ppkelLlelAaerNkipLpkvkek.lgirLPperycltavnyqlk 122
                   ++ke+L+e+A  rN+++Lp+v ++ +g+rLP+er++lt+v ++lk
   KHJ34756.1 142 gLNKEFLMEIALARNRVSLPRVLQNeWGVRLPSERFVLTGVPWGLK 187
                  8********************98777*****************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1905.26
//
Query:       KHJ34757.1  [L=632]
Description: putative kelch repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-22   78.1   5.4    1.8e-08   34.2   0.0    5.0  5  Kelch_4   Galactose oxidase, central domain
    2.3e-16   59.4   0.3    0.00011   22.3   0.0    4.7  4  Kelch_6   Kelch motif
    2.1e-15   56.3   0.1    4.8e-05   23.3   0.0    3.6  3  Kelch_5   Kelch motif
    2.3e-14   52.7   0.0    5.7e-05   22.6   0.0    5.0  5  Kelch_1   Kelch motif
      4e-14   51.9   0.7     0.0007   19.5   0.0    4.7  4  Kelch_2   Kelch motif
    9.1e-13   48.1   2.0    9.1e-06   25.8   0.0    5.8  5  Kelch_3   Galactose oxidase, central domain
    2.1e-10   40.8   0.0    3.5e-10   40.1   0.0    1.3  1  BTB       BTB/POZ domain


Domain annotation for each model (and alignments):
>> Kelch_4  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0   7.1e-12   1.8e-08       2      48 ..      19      68 ..      19      69 .. 0.90
   2 !   20.3   0.1   1.6e-07   0.00041       1      44 [.      70     113 ..      70     116 .. 0.94
   3 !   18.3   0.1   6.9e-07    0.0018       1      37 [.     118     153 ..     118     154 .. 0.94
   4 ?    3.8   0.0     0.022        57      31      45 ..     270     284 ..     269     288 .. 0.88
   5 ?   -2.9   0.0       2.9   7.4e+03       2      19 ..     295     312 ..     295     312 .. 0.67

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 7.1e-12
     Kelch_4  2 RaghsatsipdgtiylfGGrgedgtllndlylldlstntWrrl...gslP 48
                R+gh+at  +++++ +fGG++e  t l+dl ++dl t +W++    g+lP
  KHJ34757.1 19 RMGHTATLYQGDKLLIFGGENEHRTYLSDLIIFDLNTAHWTQPtvnGPLP 68
                9*********************99****************8744555555 PP

  == domain 2  score: 20.3 bits;  conditional E-value: 1.6e-07
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedg.tllndlylldlstntWrrl 44 
                 +Ra h+a+    ++++++GG+++ +  +l d++ ldl+t tW+r+
  KHJ34757.1  70 GRARHAAVLH-ENKLFIIGGITGHNnYVLEDICYLDLQTFTWSRV 113
                 59********.69**********978****************997 PP

  == domain 3  score: 18.3 bits;  conditional E-value: 6.9e-07
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedgtllndlylldls 37 
                 +R++hsa  + d+++++fGG ge++   +d++ ldl+
  KHJ34757.1 118 GRFDHSAYIW-DDRVWVFGGMGEEMDKIGDIWWLDLK 153
                 59********.69*******************99996 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.022
     Kelch_4  31 lylldlstntWrrlg 45 
                 ly ldl+t +W++l+
  KHJ34757.1 270 LYSLDLETLRWQKLA 284
                 799*********995 PP

  == domain 5  score: -2.9 bits;  conditional E-value: 2.9
     Kelch_4   2 RaghsatsipdgtiylfG 19 
                 R+++++t +++ + +l G
  KHJ34757.1 295 RWHYCTTNDDGTKAWLLG 312
                 667777777767887766 PP

>> Kelch_6  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   4.4e-08   0.00011       2      50 .]      19      71 ..      18      71 .. 0.88
   2 !   19.4   0.0   3.5e-07    0.0009       2      43 ..      71     113 ..      70     113 .. 0.95
   3 !   10.5   0.0   0.00023       0.6       4      23 ..     121     140 ..     118     155 .. 0.75
   4 ?    1.8   0.0      0.13   3.3e+02      30      44 ..     270     284 ..     269     288 .. 0.89

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 4.4e-08
     Kelch_6  2 raghslvsvgg.kiYifGGytdsspylnkvwvydpetksWeq...lpplpvpr 50
                r+gh++++++g k+ ifGG +   +yl++++++d+ t  W+q    +plp++r
  KHJ34757.1 19 RMGHTATLYQGdKLLIFGGENEHRTYLSDLIIFDLNTAHWTQptvNGPLPKGR 71
                899*****9977********988******************977556777765 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 3.5e-07
     Kelch_6   2 raghslvsvggkiYifGGytds.spylnkvwvydpetksWeql 43 
                 ra h++v++ +k++i+GG t+  +  l +++ +d++t +W+++
  KHJ34757.1  71 RARHAAVLHENKLFIIGGITGHnNYVLEDICYLDLQTFTWSRV 113
                 789****************9889*****************975 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 0.00023
     Kelch_6   4 ghslvsvggkiYifGGytds 23 
                  hs+ ++++++++fGG +  
  KHJ34757.1 121 DHSAYIWDDRVWVFGGMGEE 140
                 79**************8775 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.13
     Kelch_6  30 vwvydpetksWeqlp 44 
                 ++ +d+et +W++l+
  KHJ34757.1 270 LYSLDLETLRWQKLA 284
                 7899********986 PP

>> Kelch_5  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   1.8e-05     0.047       1      41 [.      15      55 ..      15      56 .. 0.82
   2 !   23.3   0.0   1.9e-08   4.8e-05       2      42 .]      68     108 ..      66     108 .. 0.92
   3 !   15.3   0.1   5.9e-06     0.015       4      40 ..     118     153 ..     117     155 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.8e-05
     Kelch_5  1 iPppRaghcavtv.sekiYvyGGkvgrdgsvs.ddvyvLdlps 41
                iP  R+gh a  + ++k++++GG +  ++  + +d+ ++dl++
  KHJ34757.1 15 IPGVRMGHTATLYqGDKLLIFGGEN--EHRTYlSDLIIFDLNT 55
                7999******97648**********..4555438999999976 PP

  == domain 2  score: 23.3 bits;  conditional E-value: 1.9e-08
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvgrdgsvsddvyvLdlpsf 42 
                 P +Ra+h+av +++k++++GG++g+++ v  d+  Ldl +f
  KHJ34757.1  68 PKGRARHAAVLHENKLFIIGGITGHNNYVLEDICYLDLQTF 108
                 778************************99999988888887 PP

  == domain 3  score: 15.3 bits;  conditional E-value: 5.9e-06
     Kelch_5   4 pRaghcavtvsekiYvyGGkvgrdgsvsddvyvLdlp 40 
                 +R++h+a ++++ ++v+GG++ ++++  +d++ Ldl+
  KHJ34757.1 118 GRFDHSAYIWDDRVWVFGGMG-EEMDKIGDIWWLDLK 153
                 79*******************.566666999999987 PP

>> Kelch_1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   6.7e-07    0.0017       6      41 ..      24      60 ..      19      62 .. 0.91
   2 !   22.6   0.0   2.2e-08   5.7e-05       2      42 ..      71     113 ..      70     113 .. 0.97
   3 ?    3.2   0.0     0.026        67       2      34 ..     119     152 ..     118     155 .. 0.74
   4 ?    1.7   0.0     0.076   1.9e+02      27      43 ..     268     284 ..     260     286 .. 0.87
   5 ?   -0.8   0.0      0.46   1.2e+03      23      35 ..     328     340 ..     323     341 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 6.7e-07
                EEEEETTEEEEEEEBCS.SSBEEEEEEEETTTTEEEE CS
     Kelch_1  6 gavvvggkiYviGGsdg.gnalssvevyDpetntWre 41
                +  + g+k+ ++GG ++  ++ls++ ++D+ t  W++
  KHJ34757.1 24 ATLYQGDKLLIFGGENEhRTYLSDLIIFDLNTAHWTQ 60
                667789*****************************96 PP

  == domain 2  score: 22.6 bits;  conditional E-value: 2.2e-08
                 BBSEEEEEETTEEEEEEEBCS..SSBEEEEEEEETTTTEEEEE CS
     Kelch_1   2 ragagavvvggkiYviGGsdg..gnalssvevyDpetntWrel 42 
                 ra+++av + +k+++iGG  g  +  l ++ ++D+ t tW+++
  KHJ34757.1  71 RARHAAVLHENKLFIIGGITGhnNYVLEDICYLDLQTFTWSRV 113
                 9***************************************986 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.026
                 BBSEEEEEETTEEEEEEEBCS.SSBEEEEEEEET CS
     Kelch_1   2 ragagavvvggkiYviGGsdg.gnalssvevyDp 34 
                 r  ++a   ++++ v+GG+ +      +++++D+
  KHJ34757.1 119 RFDHSAYIWDDRVWVFGGMGEeMDKIGDIWWLDL 152
                 55677777899*******9987666666666665 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.076
                 EEEEEEETTTTEEEEEC CS
     Kelch_1  27 ssvevyDpetntWrelp 43 
                 +s++ +D+et  W +l+
  KHJ34757.1 268 CSLYSLDLETLRWQKLA 284
                 799**********9998 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 0.46
                 SSBEEEEEEEETT CS
     Kelch_1  23 gnalssvevyDpe 35 
                  ++ls+++ +D++
  KHJ34757.1 328 EEYLSDIMEFDLR 340
                 579********86 PP

>> Kelch_2  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   5.4e-07    0.0014       2      46 ..      19      62 ..      18      65 .. 0.89
   2 !   19.5   0.0   2.7e-07    0.0007       1      45 [.      70     113 ..      70     113 .. 0.95
   3 !    7.8   0.2    0.0013       3.3       2      39 ..     119     154 ..     118     156 .. 0.93
   4 ?   -0.1   0.0      0.42   1.1e+03      23      38 ..     325     340 ..     317     342 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 5.4e-07
     Kelch_2  2 rgghsss.vpggkiyvvGGahtdnpnlsssdvhvldlekhvWeevt 46
                r+gh+++ + g+k++++GG    +   + sd+ ++dl++  W+  t
  KHJ34757.1 19 RMGHTATlYQGDKLLIFGGE--NEHRTYLSDLIIFDLNTAHWTQPT 62
                6777777699**********..*****************9999765 PP

  == domain 2  score: 19.5 bits;  conditional E-value: 2.7e-07
     Kelch_2   1 rrgghsssvpggkiyvvGGahtdnpnlsssdvhvldlekhvWeev 45 
                 +r++h+++  ++k++++GG+ t+ +n + +d+  ldl++ +W++v
  KHJ34757.1  70 GRARHAAVLHENKLFIIGGI-TGHNNYVLEDICYLDLQTFTWSRV 113
                 599*****************.******************999986 PP

  == domain 3  score: 7.8 bits;  conditional E-value: 0.0013
     Kelch_2   2 rgghsssvpggkiyvvGGahtdnpnlsssdvhvldlek 39 
                 r+ hs+  +++++ v+GG   ++  +++ d+++ldl++
  KHJ34757.1 119 RFDHSAYIWDDRVWVFGGM--GEEMDKIGDIWWLDLKG 154
                 8899999************..**************975 PP

  == domain 4  score: -0.1 bits;  conditional E-value: 0.42
     Kelch_2  23 dnpnlsssdvhvldle 38 
                 +++ ++ sd++ +dl+
  KHJ34757.1 325 SGFEEYLSDIMEFDLR 340
                 58999*********87 PP

>> Kelch_3  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.4   0.0    0.0022       5.6      29      48 ..       4      26 ..       1      27 [. 0.78
   2 !   25.8   0.0   3.6e-09   9.1e-06       1      48 [.      29      78 ..      29      79 .. 0.95
   3 ?    3.5   0.1     0.035        91       1      16 [.      80      94 ..      80     118 .. 0.72
   4 ?    2.1   0.0     0.097   2.5e+02       1      26 [.     128     152 ..     128     176 .. 0.70
   5 ?    3.3   0.0     0.043   1.1e+02      20      35 ..     269     288 ..     265     301 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0022
     Kelch_3 29 ntWaei...aslppaRaghaata 48
                 +W  +   ++ p+ R+gh+at+
  KHJ34757.1  4 YQWSLVdnyGDIPGVRMGHTATL 26
                56775555599**********97 PP

  == domain 2  score: 25.8 bits;  conditional E-value: 3.6e-09
     Kelch_3  1 gdrlyifGGlgddgqdrlndvyvydldtntWaei...aslppaRaghaata 48
                gd+l+ifGG++  ++++l+d+  +dl+t  W++    ++lp +Ra haa++
  KHJ34757.1 29 GDKLLIFGGEN-EHRTYLSDLIIFDLNTAHWTQPtvnGPLPKGRARHAAVL 78
                79*********.8*******************9999*********999975 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.035
     Kelch_3  1 gdrlyifGGlgddgqd 16
                +++l+i+GG ++ +++
  KHJ34757.1 80 ENKLFIIGGITG-HNN 94
                599********3.343 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.097
     Kelch_3   1 gdrlyifGGlgddgqdrlndvyvydl 26 
                 +dr+++fGG g    d  +d + +dl
  KHJ34757.1 128 DDRVWVFGGMG-EEMDKIGDIWWLDL 152
                 589******88.45666666666666 PP

  == domain 5  score: 3.3 bits;  conditional E-value: 0.043
     Kelch_3  20 dvyvydldtntWaei....a 35 
                 ++y++dl+t  W+++    +
  KHJ34757.1 269 SLYSLDLETLRWQKLaegkD 288
                 69***********9944444 PP

>> BTB  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.1   0.0   1.4e-13   3.5e-10      22     107 ..     431     517 ..     413     521 .. 0.89

  Alignments for each domain:
  == domain 1  score: 40.1 bits;  conditional E-value: 1.4e-13
                 EEEE-HHHHHHH-HHHHHHHTSTTTTTCCCEEEEETTSGHHHHHHHHHHHHHSEEEC-...CGGGHHHHHHHHHHHT-HHHHHHHHHHH CS
         BTB  22 efkahkavLaarSpyFkalftskeieessvseielddvepeafealLefiYtgeleit...seenleelLaaadllqiprlkkaceefl 107
                  +++hk++L ar p F++l + + ++e +++++++++  +++++a+L ++Yt+++++    + ++++ +L + +++++p+l  +c + l
  KHJ34757.1 431 PIHVHKLILQARWPHFSRLYNAQ-MAEFHTKRMHIPE-PYSVVKAFLYYLYTDTIQTGhefDLSDVAGMLVMSNIYNMPNLRLLCVNRL 517
                 69*********************.9999999887665.79*****************9999999********************98876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (632 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       299  (0.0166769); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.51u 0.30s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 4429.05
//
Query:       KHJ34758.1  [L=114]
Description: hypothetical protein EV44_g3548 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.28s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 839.86
//
Query:       KHJ34759.1  [L=400]
Description: putative biotin synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      5e-22   77.9   0.0    1.2e-21   76.6   0.0    1.7  1  BATS         Biotin and Thiamin Synthesis associated domain
    9.2e-15   55.4   0.1    4.1e-14   53.3   0.2    1.9  2  Radical_SAM  Radical SAM superfamily
  ------ inclusion threshold ------
       0.11   12.2   0.0       0.26   11.0   0.0    1.5  1  INPP5B_PH    Type II inositol 1,4,5-trisphosphate 5-phosphata


Domain annotation for each model (and alignments):
>> BATS  Biotin and Thiamin Synthesis associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.6   0.0     2e-25   1.2e-21       1      85 [.     274     364 ..     274     365 .. 0.99

  Alignments for each domain:
  == domain 1  score: 76.6 bits;  conditional E-value: 2e-25
                 E--B----TCCCC...........HHHHHHHHHHSTTSE.CCCTCHH-HHHHHH.HHHCCT--EEE-C---TTTGGGSESSTT-TCCCCHHHHHHTT- CS
        BATS   1 siprlrpikdtpl...........lkiiaalRlllPkag.illsgResaefrdq.lllklGansisagsktevggyaflttdgrsleedvkmleelGl 85 
                 +++ l+pik+tpl           l++ia++R+++P++  +l++gR++ ++++q l++++Gan++++g+k       +ltt+++ ++ed + + ++Gl
  KHJ34759.1 274 PVNTLVPIKGTPLgdtpkipfdaiLRTIATARIVMPQTIiRLAAGRTTLSEEQQvLCFMAGANAVFTGEK-------MLTTPCNGWDEDNQIFYKWGL 364
                 89*******************************************************************9.......********************8 PP

>> Radical_SAM  Radical SAM superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.3   0.2   6.9e-18   4.1e-14       4     160 ..     102     256 ..      99     261 .. 0.81
   2 ?   -0.9   0.0      0.31   1.9e+03      26      73 ..     289     336 ..     275     359 .. 0.68

  Alignments for each domain:
  == domain 1  score: 53.3 bits;  conditional E-value: 6.9e-18
                  ESEESS--TTTSCCTT.HHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEESSTGGGSTTHHHHHHHHHHTC....CCTEEEEEEECSSCHGHHHHHH CS
                  xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM   4 trgCnlrCsfCarpet.vrregrgrslsveeileevkelkaekgvkevilgggepllypdfvellerlakla....vpgiritvetngtlpdeekler 96 
                  t gC+ +Cs+Ca+++      +  ++++v+++le +k++k  +g   + +g    +++      l+++++      + g++++v+   +    e++ +
   KHJ34759.1 102 TGGCSEDCSYCAQSSRyNTGLKATKMVTVDSVLEAAKIAK-QNGSTRFCMGAAWRDMRG-RKSGLKNIKEMVtgvrNMGMECCVTLGMID--LEQAME 195
                  78************999999999****************6.667999999988788864.335555555555342223555555544444..7***** PP

                  HHHTT-SEEEEEEBSSSHHHHHHHHTCTSHHHHHHHHHHHHHHTTSETEEEEEEEBTTTSHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM  97 llelgvdrvslgleaaddekvlklmnrghtfeevlealeklreagikrvvdrivglpGendeel 160
                  l+e+g++ +++++++  +  +   +  + t++e+l+++ + r+ag+  v+++ +++ Ge  e++
   KHJ34759.1 196 LKEAGLTAYNHNVDTSREH-YPSVI-TTRTYDERLQTIANVRDAGLS-VCTGGILGLGEKAEDH 256
                  *******************.*****.99*******************.7888888888888775 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.31
                  HHHHHHHHHHHHHHHHHHHTTSEEEEEESSTGGGSTTHHHHHHHHHHT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM  26 grslsveeileevkelkaekgvkevilgggepllypdfvellerlakl 73 
                     ++ + il+ +  ++  +    + l  g  +l  + ++l +++ ++
   KHJ34759.1 289 TPKIPFDAILRTIATARIVMPQTIIRLAAGRTTLSEEQQVLCFMAGAN 336
                  455666667777777764444667777777777777777777766665 PP

>> INPP5B_PH  Type II inositol 1,4,5-trisphosphate 5-phosphatase PH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   4.3e-05      0.26      35      71 ..     246     282 ..     229     284 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.3e-05
   INPP5B_PH  35 LLglVesskekalflythrrmaitgedlslekvvPId 71 
                  Lgl e ++++  ++yt + m+ ++e  +++  vPI 
  KHJ34759.1 246 ILGLGEKAEDHIGLIYTVATMPAHPESFPVNTLVPIK 282
                 799*********************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.20s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 3090.01
//
Query:       KHJ34760.1  [L=658]
Description: putative glycerol-3-phosphate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-50  173.2   0.0    1.5e-50  172.8   0.0    1.2  1  DAO            FAD dependent oxidoreductase
    1.1e-44  151.3   0.0    1.8e-44  150.6   0.0    1.4  1  DAO_C          C-terminal domain of alpha-glycerophosphate ox
    4.5e-06   26.0   0.1    1.2e-05   24.6   0.1    1.7  1  FAD_binding_2  FAD binding domain
    2.7e-05   23.7   0.0    0.00024   20.6   0.0    2.1  2  FAD_oxidored   FAD dependent oxidoreductase
    0.00053   19.3   0.0     0.0018   17.6   0.0    1.7  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
     0.0051   15.9   0.1       0.18   10.9   0.1    2.1  2  GIDA           Glucose inhibited division protein A
  ------ inclusion threshold ------
      0.011   15.9   0.2      0.038   14.2   0.2    2.0  2  NAD_binding_8  NAD(P)-binding Rossmann-like domain
      0.012   14.9   0.1      0.068   12.4   0.0    2.0  2  Pyr_redox_3    Pyridine nucleotide-disulphide oxidoreductase
      0.021   14.7   0.2      0.039   13.8   0.2    1.4  1  3HCDH_N        3-hydroxyacyl-CoA dehydrogenase, NAD binding d
      0.035   12.8   0.2      0.056   12.1   0.2    1.2  1  HI0933_like    HI0933-like protein
        0.1   13.1   0.9       0.29   11.7   0.3    2.1  2  Pyr_redox      Pyridine nucleotide-disulphide oxidoreductase


Domain annotation for each model (and alignments):
>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.8   0.0   9.3e-54   1.5e-50       1     352 []      92     463 ..      92     463 .. 0.79

  Alignments for each domain:
  == domain 1  score: 172.8 bits;  conditional E-value: 9.3e-54
                 EEEEECTSHHHHHHHHHHHHTT..EEEEESSSSTTSSGGGSSEEEEESSSSTHHSTH.....HHHHHHHHHHHHHHHHHHHHSSTTSEEEEEEEEEESS CS
         DAO   1 dvviiGGGiiGlstAyeLarrg..VtllekgdiagsgaSgrnsgllhsglrylpeas.....elarlslealeelreleeelgididyrrtGllslaad 92 
                 d+++iGGG +G+++A+++ +rg  V+l+e++ +++sg+S+++++l+h+g+ryl++a       +++l++eal+e+  + ++ ++++    + +l+l   
  KHJ34760.1  92 DILVIGGGATGAGIALDAVTRGlkVALVERD-DFSSGTSSKSTKLVHGGVRYLEKAVwdldySQYKLVREALKERSYFLQT-APHLSSWLPIMLPLNKW 188
                 8******************************.8888******************98899999777**********888876.99988777888888653 PP

                 HHHHHHHHHHHHHH......HHTTTTE.EEEEHHHHHHHSTTST..TTSEEEEETTEEEEEHHHHHHHHHHHHHHTT-EEEESECEEEEEEEE...... CS
         DAO  93 eeelealdkllall......leaglda.elldaeevrelepalp..gllgalfypdtgqvdpakltaalaraaealGveilegtevtgleeed...... 176
                  +  ++   +++        +  g+++ ++l+++++++ +p+l+  +l+gal+y+d+++ ++ ++  +la +a+  G++++++ ev gle+++      
  KHJ34760.1 189 WK-VPYY--WIGTKcydllaGTEGIESsYFLTRSKALDAFPMLKktDLVGALVYYDGAH-NDSRMNVSLAMTAALYGCTVVNHVEVIGLEKDQngnlcg 283
                 22.3332..222224444586689999458***99*******44479*********666.*****************************7744555443 PP

                 TCEEEEE....EECT.EEE.E....EEEEEEE--GGGHHHH.HTT.CTTTSEEEEEEEEEEEEEECCTHSTGSGCSEEEEEEEETTTTEEEEEETTSEE CS
         DAO 177 gkvwgve....rttp.gen.d....aadavVnaaGawsdll.gll.keldlpispvrgqvlvlkplseklvspaailpvpetdddgrgvyvtprkdgrv 263
                       +    + ++ ge+ d    +a+ ++na+G+++d +  ++ ++++  + p  g ++vl p   ++    +i+p   ++ dgr+++++p+  g++
  KHJ34760.1 284 A-----RlkdlVPKKnGEKaDkfvvRAKSIINATGPFTDAIrIMDdQNVKEIVAPSSGVHIVL-PDYYSPRNMGLIDP---KTSDGRVIFFLPWQ-GTT 372
                 3.....34466334446664456444455**********66434455556678**********.76665544457776...8899*********5.999 PP

                 EEEESSEEETTCSSTSCSHHHHHHHHHHHHHHS.GGG....CGEEEEEEEEEEETTSSEEEEEEE.TEEEEEEEEECTTTHHHHHHHHHHHHHHH CS
         DAO 264 lvGgtadeesgdddpevdeedidellealrklf.Pql....gdvlrkwaGlrplpdglpligetp.gvkglylatGhsghGltlapatGkllael 352
                 ++G+t++++s +++p + +++id++l+++r+++ P++    +d+l +w+G+rpl  ++p   +t+  v+++++    s +Gl ++++ Gk+++++
  KHJ34760.1 373 IAGTTDTPTSITNNPVAGQDEIDWILSEIRHYLsPDInvrhSDILAAWSGIRPL-VKDPKAKNTEsLVRNHLID--VSPSGLLTCAG-GKWTTYR 463
                 9*****988888889******************8884455688**********5.4456666644456666666..36699999999.9999875 PP

>> DAO_C  C-terminal domain of alpha-glycerophosphate oxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.6   0.0   1.1e-47   1.8e-44       1     126 []     500     627 ..     500     627 .. 0.97

  Alignments for each domain:
  == domain 1  score: 150.6 bits;  conditional E-value: 1.1e-47
                 --TTS---TT--.......TT-STTHT--HHHHHHHHHHHGGGHHHHHHHHHHTH.....HHHHHTTS-HHHHHHHHHHHHHS---SHHHHHHTTS-HH CS
       DAO_C   1 crTkklpLvGaenwsknlaaelaqeygldeevaehLaerYGsraeevlelakedekp..elaerlspelpyieaevvYavrhEmartlvDvlaRRtrla 97 
                 c+T++++LvGa+++ knl+++l+q ygl++eva+hLae+YG+ra++v++l++ ++++    +er+sp +p+i +ev+Yavr+E+a+t+vDvlaRRtrla
  KHJ34760.1 500 CQTHRVKLVGAHGFFKNLFINLIQMYGLETEVARHLAESYGDRAWTVASLSSLTKRRypIRGERISPLFPFIDGEVRYAVRYEYAQTAVDVLARRTRLA 598
                 9***********************************************999988877779*************************************** PP

                 HH-HHHHHHHHHHHHHHHHHHTT--HHHH CS
       DAO_C  98 fldadaalealpevaelmaeelgWdearr 126
                 fl+a+aalea p+v+++ma el+W+++r+
  KHJ34760.1 599 FLNAQAALEATPKVIDIMASELNWNDHRK 627
                 *************************9985 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.1   7.6e-09   1.2e-05       1     204 [.      92     317 ..      92     342 .. 0.69

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 7.6e-09
                    SEEEE--SHHHHHHHHHHHHTTT-EEEEESSSGGGSGGGG--S-EE-TT..SSGGSTC.CHHHHHHHHHHHHTTT-S..-HHHHHHHHHTHHHHHH CS
  FAD_binding_2   1 DviViGsGlAGLaAAleaaeaGlkvavvekeqefggatawsqGgidavlspeqkkagikdspelhrtdtlkaldela..dqplveafveaapeavd 94 
                    D++ViG+G+ G   Al a  +Glkva+ve  +  +g++  s     +v        g+ + +e++++d+  +  +l   + +   +f+++ap+  +
     KHJ34760.1  92 DILVIGGGATGAGIALDAVTRGLKVALVERDDFSSGTSSKS---TKLVH------GGV-RYLEKAVWDLDYSQYKLVreALKERSYFLQTAPHLSS 177
                    99******************************955544444...44444......333.5566666666655555442234446799********* PP

                    HHHHT.......T----B............CCTS.........SB-EEE-TT-SST....EEEE-.STT-......HHHHHHHHHHHHHHTCTEEE CS
  FAD_binding_2  95 eLeel.......gvpfsr............tedg.........pvdvrelGglsat....artlhdaadarretlvtghallarlvesarkagvdf 158
                    +L  +        vp+ +            +  g           ++  +  l++t    a++ +       +  ++  ++ + l+ +a  +g+++
     KHJ34760.1 178 WLPIMlplnkwwKVPYYWigtkcydllagtE--GiessyfltrSKALDAFPMLKKTdlvgALVYY-------DGAHNDSRMNVSLAMTAALYGCTV 264
                    **98877755554444447777777776430..23444444444455555566666333333333.......345578888888888888899*** PP

                    EESEEEEEEEEC.TTEEEEEEEEET......TTTCEEEEEESEEEE-----GG CS
  FAD_binding_2 159 qerteadeLive.dgrvtGavvenp......esgrevrirakavvlatgGfgr 204
                     ++ e+  L  + +g   Ga ++++      e+  ++ +rak ++ atg f  
     KHJ34760.1 265 VNHVEVIGLEKDqNGNLCGARLKDLvpkkngEKADKFVVRAKSIINATGPFTD 317
                    *********99636699*****99999988888888899999***99999985 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   1.5e-07   0.00024       1      40 [.      92     131 ..      92     169 .. 0.90
   2 ?    0.7   0.0      0.16   2.7e+02      88     144 ..     248     313 ..     209     314 .. 0.74

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 1.5e-07
  FAD_oxidored   1 DvvVvGGgpaGvaAAiaAaraGakvlLveergvlGGllts 40 
                   D++V+GGg+ G   A+ A  +G kv+Lve++++  G++++
    KHJ34760.1  92 DILVIGGGATGAGIALDAVTRGLKVALVERDDFSSGTSSK 131
                   9*******************************98888776 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.16
  FAD_oxidored  88 vakavleemlaeagvtvllntrlvevekeg......kriesvtveske.g..rktirAkvfiDATg 144
                    ++  l    a +g tv+ + ++++ ek++       r++ ++ +++  +  + ++rAk +i ATg
    KHJ34760.1 248 RMNVSLAMTAALYGCTVVNHVEVIGLEKDQngnlcgARLKDLVPKKNGeKadKFVVRAKSIINATG 313
                   5555555555668999999999999999743466666677777766555467999**********8 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   1.1e-06    0.0018       1      48 [.      91     137 ..      91     187 .. 0.85
   2 ?   -1.2   0.0      0.57   9.3e+02      70     109 ..     265     314 ..     204     332 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 1.1e-06
                  CSEEEE--SHHHHHHHHHHHHHTS-EEEEETTHCHHHCSHHHHCHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2   1 kdvvviGgGpAGlaaaltlaqagakvtlvelegtclnggcllskallg 48 
                  +d++viGgG+ G   al++ + g+kv+lv +++ +  g+ + s++l++
   KHJ34760.1  91 YDILVIGGGATGAGIALDAVTRGLKVALV-ERDDFSSGTSSKSTKLVH 137
                  699**************************.777777777776666554 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.57
                  CHCCTCEEEEESC.EEEEETEEEC.........TCEEEEEESEEEE---E CS
                  xxxxxxxxxxxxx.xxxxxxxxxx.........xxxxxxxxxxxxxxxxx RF
  Pyr_redox_2  70 llgeevvkidpgk.kkvklekkke.........gdeekiaydklvlAtGs 109
                  ++ +ev+++++++ +++    +k+          d++ + +++++ AtG 
   KHJ34760.1 265 VNHVEVIGLEKDQnGNLCGARLKDlvpkkngekADKFVVRAKSIINATGP 314
                  44456666666666666666666677776777788899999999999994 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.1   0.00011      0.18       1      29 [.      92     120 ..      92     155 .. 0.84
   2 ?    2.9   0.0     0.029        47     133     162 ..     297     326 ..     271     332 .. 0.71

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00011
                 CEEEE-SSHHHHHHHHHHHHTT--EEEEE CS
        GIDA   1 dviViGgGhAGceAAlaaarlGakvlLit 29 
                 d+ ViGgG  G   Al a  +G+kv+L+ 
  KHJ34760.1  92 DILVIGGGATGAGIALDAVTRGLKVALVE 120
                 799************************92 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.029
                 ETTS-EEEECEEEE--TT-BT-EEEETTEE CS
        GIDA 133 tedgetikakavviatGtflkgkihigeke 162
                 ++d+ +++ak+++ atG+f ++  ++ +++
  KHJ34760.1 297 KADKFVVRAKSIINATGPFTDAIRIMDDQN 326
                 46777899**********999887776665 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.2   2.4e-05     0.038       1      44 [.      95     141 ..      95     164 .. 0.79
   2 ?   -3.3   0.0       6.8   1.1e+04      31      40 ..     455     464 ..     453     478 .. 0.73

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.4e-05
                    EE--SHHHHHHHHHHHCCTEEEEEE-SSSSSSGGG-EECE...TTCE CS
  NAD_binding_8   1 IvGaGlsGlvaAylLakagfdvlllekrdrlGGraasyev...pgvr 44 
                    ++G+G++G+ +A  +  +g++v l+e+ d  +G ++  +    +gvr
     KHJ34760.1  95 VIGGGATGAGIALDAVTRGLKVALVERDDFSSGTSSKSTKlvhGGVR 141
                    8****************************999988876554544444 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 6.8
                    SSGGG-EECE CS
  NAD_binding_8  31 lGGraasyev 40 
                     GG++++y+ 
     KHJ34760.1 455 AGGKWTTYRQ 464
                    6999999986 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   4.2e-05     0.068     163     206 ..      89     131 ..      66     165 .. 0.74
   2 ?   -0.6   0.0      0.38   6.1e+02     119     137 ..     299     317 ..     297     330 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.2e-05
  Pyr_redox_3 163 agqkvvViGgknSavDaAlelvrkgaeVtvvtrgseiekeesdp 206
                  +  +++ViGg+ +++ +Al+ v +g +V +v r++  + + s+ 
   KHJ34760.1  89 NVYDILVIGGGATGAGIALDAVTRGLKVALVERDDFSSGT-SSK 131
                  346899*************************999855444.333 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.38
  Pyr_redox_3 119 sketyeAkkviiAtGefdk 137
                  +k +++Ak++i AtG f  
   KHJ34760.1 299 DKFVVRAKSIINATGPFTD 317
                  677899*********9975 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.2   2.4e-05     0.039       2      32 ..      93     123 ..      92     147 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 2.4e-05
                 EEEE--SCCHHHHHHHHHHTT-EEEEE-S-H CS
     3HCDH_N   2 vaviGaGtmGagiaavfasagleVvlvdise 32 
                 + viG G  Gagia  ++ +gl+V lv++++
  KHJ34760.1  93 ILVIGGGATGAGIALDAVTRGLKVALVERDD 123
                 679************************9975 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   3.5e-05     0.056       1      32 [.      91     122 ..      91     126 .. 0.94

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.5e-05
                  -SEEEE--SHHHHHHHHHHHHTT--EEEE-SS CS
  HI0933_like   1 kdviviGgGaAGlmaAisaakrgkrVllleka 32 
                  +d++viGgGa G   A+ a +rg +V+l+e+ 
   KHJ34760.1  91 YDILVIGGGATGAGIALDAVTRGLKVALVERD 122
                  589**************************975 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.3   0.00018      0.29       2      32 ..      93     123 ..      92     129 .. 0.95
   2 ?   -3.2   0.0       8.2   1.3e+04      55      73 ..     319     337 ..     317     341 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00018
                 EEEECSSHHHHHHHHHHHHTTSEEEEEESSS CS
   Pyr_redox   2 vvvvGgGyiglElAgalaelgkkVtvversd 32 
                 ++v+GgG +g   A  +   g kV +ver d
  KHJ34760.1  93 ILVIGGGATGAGIALDAVTRGLKVALVERDD 123
                 89**************************987 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 8.2
                 EEEECSEEEEEEEEETTSE CS
   Pyr_redox  55 ievllntkveeiegsedgv 73 
                 i+++ +++v+ei+  ++gv
  KHJ34760.1 319 IRIMDDQNVKEIVAPSSGV 337
                 7899999999999877774 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (658 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 4530.13
//
Query:       KHJ34761.1  [L=596]
Description: putative nadp-dependent malic enzyme protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-90  302.4   0.0    2.9e-90  302.0   0.0    1.2  1  Malic_M         Malic enzyme, NAD binding domain
    4.2e-69  232.0   0.0    7.2e-69  231.2   0.0    1.4  1  malic           Malic enzyme, N-terminal domain
  ------ inclusion threshold ------
      0.087   12.8   0.0       0.18   11.8   0.0    1.4  1  Rad33           Rad33
        0.1   12.7   0.1        1.7    8.7   0.1    2.5  2  Gly_rich_SFCGS  Glycine-rich SFCGS


Domain annotation for each model (and alignments):
>> Malic_M  Malic enzyme, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  302.0   0.0   6.5e-94   2.9e-90       1     256 [.     295     558 ..     295     560 .. 0.97

  Alignments for each domain:
  == domain 1  score: 302.0 bits;  conditional E-value: 6.5e-94
                 THHHHHHHHHHHHHHHHHH-S-GGG--EEEEC-SHHHHHHHHHHHHHHHTTTS-HHHHHTTEEEEETTEE-BTT-.S---TTTGGGSBS--SS--S... CS
     Malic_M   1 iqgTaavalagllaalkitgkklseqkivvlGaGsagiGiaeqivealvkeGlseeeakkkiylvDrkGLltedr.ekleeekkpfakkkeelkeakdk 98 
                 iqgT+av+lag+++a+++++++l++qk+v++GaGsag+G+a+q++e ++++Glse +ak+kiylvD+kGL+t+dr ++l+e+k+ fa+++++ ++    
  KHJ34761.1 295 IQGTGAVVLAGYISAVRLSNVPLEDQKLVFMGAGSAGVGVAKQLMEYYIRHGLSERDAKDKIYLVDTKGLITTDRgDQLNEYKRIFARSDNNGRQL--- 390
                 9**************************************************************************899**************9955... PP

                 .SHHHHHHHH--SEEEE-SSSSS-S-HHHHHHHHHHSS......S-EEEE--SSGGGSSS-HHHHHHHTTT-SEEEESS----EEE....TSEEE--EE CS
     Malic_M  99 ltLeevvkkvkptvliGlsgvagafteeivremakste......rPiilplSNPtskaEataedvlkwtdgkalvasGsPfkpvel....ngktyeigQ 187
                 ++Lee++ +vk+t+liGl+++ g+fte+iv+++++s+e      r i++plSNP skaE+t+e+++kwtdg++++asGsPf p++l     ++t++++Q
  KHJ34761.1 391 QSLEEIILEVKATALIGLTATYGTFTESIVKALKDSVEasgadrRCILFPLSNPLSKAECTFEQAIKWTDGTVIFASGSPFTPYTLqfnnHNTTFYPNQ 489
                 8************************************99999999*************************************9987553236789**** PP

                 --GGGTHHHHHHHHHHTT-SS--HHHHHHHHHHHHTT--HHHHHTT-SS--GGGHHHHHHHHHHHHHHH CS
     Malic_M 188 aNNayifPglglgvivarakritdemllaaaealaelvseeelkegsllPelseirevslkvavavaka 256
                 +NN+yifPglglg+i+a++k +td+m+++aa al+ +++eee++ g ++P+++++re+s+ va +v+k+
  KHJ34761.1 490 GNNVYIFPGLGLGAILAKTKCVTDSMVYTAAAALSGCLNEEEIRMGLIYPRIERVREASIVVAREVMKC 558
                 ******************************************************************996 PP

>> malic  Malic enzyme, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.2   0.0   1.6e-72   7.2e-69       4     182 .]     109     286 ..     106     286 .. 0.98

  Alignments for each domain:
  == domain 1  score: 231.2 bits;  conditional E-value: 1.6e-72
                 ECCCCCCHHCCCHHHHHHHHSTTCHHHHHHHHHHHGGCHHSCCCEGGGETCHHHHHTTSS.SS..EEEEE-SSSBTTTBS-GHHHHHHHHHHHHHHHHH CS
       malic   4 netlfykllkekleellpivYtPtvgeacqeyseeyrkarglylsikdkekikeilknlpeedvkvivvtdgeriLGlGdlGvagvgimvGKlaLytal 102
                 n  lf+++l+++++ l+p++YtPt+g++c +ys+ y+++++ly+sik++++i++il+n+p++d  ++vvtdg+r+LGlGdlGv+gvgi++GKl+Lyta+
  KHJ34761.1 109 NIHLFFRILMDHVSILMPLIYTPTIGDVCLQYSTLYTRPEALYISIKQRKSISNILRNWPHSDPSICVVTDGSRVLGLGDLGVNGVGISIGKLSLYTAA 207
                 66799********************************************************************************************** PP

                 HS-EGGGEEEEEECS-BS.HHHHC.TT..S.SSB...SHHHHHHHHHHHHHHHHHHGCTSEEEE-S--CCHHHHHHHHHC CS
       malic 103 agidPekvlpvvldvgtnneelledplYlGlrkkRvkgeeydefvdefveavkelfppkaliqfEDfkaknafeileryr 182
                 agi+P+k+lpvvld+gt ne+ l+dplYlGlr+kRv+++  +ef+def++av e++ p++l+qfEDf++++af+ leryr
  KHJ34761.1 208 AGIHPDKTLPVVLDCGTTNEDNLKDPLYLGLRQKRVSSQVAQEFMDEFMSAVIEVY-PNMLVQFEDFETEKAFRYLERYR 286
                 ********************************************************.9*********************8 PP

>> Rad33  Rad33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   3.9e-05      0.18       6      52 ..     250     296 ..     244     301 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.9e-05
       Rad33   6 kldeeiedeileaYselleeeqDlaLkqlpqlleeLkiPkcftkdie 52 
                 +  +e    ++e+Y ++l + +D+  ++  ++le+ ++ kcf +di+
  KHJ34761.1 250 EFMDEFMSAVIEVYPNMLVQFEDFETEKAFRYLERYRVNKCFNDDIQ 296
                 45566677799***********************************7 PP

>> Gly_rich_SFCGS  Glycine-rich SFCGS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.12   5.3e+02      81     104 ..     172     195 ..     163     200 .. 0.83
   2 ?    8.7   0.1   0.00038       1.7      22      78 ..     296     349 ..     285     360 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.12
  Gly_rich_SFCGS  81 egvtaikegkkvlgfgfldkeelg 104
                       +  + +g++vlg+g l  + +g
      KHJ34761.1 172 PSICVVTDGSRVLGLGDLGVNGVG 195
                     5688999*********98877766 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00038
  Gly_rich_SFCGS  22 aggkaivipglaadlklgdvmkkeeadlgisfcgsggagaltaqtkygykakyglrs 78 
                      g+ a+v++g  + ++l +v  +++    + f g+g ag  +a++   y +++gl  
      KHJ34761.1 296 QGTGAVVLAGYISAVRLSNVPLEDQ---KLVFMGAGSAGVGVAKQLMEYYIRHGLSE 349
                     58889999**9999***99987755...689**********************9965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (596 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       498  (0.0277762); expected 358.6 (0.02)
Passed bias filter:                      451  (0.0251548); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 4386.17
//
Query:       KHJ34762.1  [L=286]
Description: hypothetical protein EV44_g4146 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.024   13.3   0.1      0.029   13.0   0.1    1.1  1  DHC_N1    Dynein heavy chain, N-terminal region 1
       0.03   15.0   0.1      0.081   13.6   0.1    1.7  1  DUF2281   Protein of unknown function (DUF2281)


Domain annotation for each model (and alignments):
>> DHC_N1  Dynein heavy chain, N-terminal region 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.1   3.2e-06     0.029     299     371 ..      85     161 ..      52     225 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 3.2e-06
      DHC_N1 299 lerrlqaiinqafedasslesalellrkfesllerpkikaaleekytdllqmykeeleavkklfekqkenps....a 371
                  e + ++ii +++++ +++e+a  +++k+  +l+     ++l ++  + l++++e+l+a+k +  ++  +++     
  KHJ34762.1  85 AEISAKNIIINRLDSSTRAEEATLVFQKIACVLDDAICGEQLPPHLFSTLRNFAEDLKALKTKSPSKNTQEDhrllV 161
                 578999*******************************************************9987644443344542 PP

>> DUF2281  Protein of unknown function (DUF2281)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   9.1e-06     0.081       7      38 ..     124     156 ..     123     161 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 9.1e-06
     DUF2281   7 qeLPedlkqEvldFaefLleKy.aakkkktlkl 38 
                 ++LP++l +++ +Fae L++ + ++ +k+t+++
  KHJ34762.1 124 EQLPPHLFSTLRNFAEDLKALKtKSPSKNTQED 156
                 69****************997756667777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2323.72
//
Query:       KHJ34763.1  [L=310]
Description: putative vacuolar import and degradation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.2e-69  231.5   2.0    5.6e-69  231.1   2.0    1.2  1  Vac_ImportDeg  Vacuolar import and degradation protein
     0.0053   16.0   0.0     0.0076   15.5   0.0    1.2  1  PM0188         Sialyltransferase PMO188


Domain annotation for each model (and alignments):
>> Vac_ImportDeg  Vacuolar import and degradation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  231.1   2.0   6.2e-73   5.6e-69       1     162 []     128     298 ..     128     298 .. 0.98

  Alignments for each domain:
  == domain 1  score: 231.1 bits;  conditional E-value: 6.2e-73
  Vac_ImportDeg   1 flrpgakfkGeqqsgkkkyevkvelktvdleeslltGfleikglteekpeittffegeiidekysfltkkkkwkaseetDlehWkkleafkkllak 96 
                    flrpg++fkG+qqs+++ y+v+ve+k vd++es+l+G+l+i+glte++p++tt+fegeii +ky+flt++++w++++++Dl+hW+k+++f+++ +k
     KHJ34763.1 128 FLRPGSRFKGTQQSERQVYDVQVEIKYVDMRESFLCGYLRIQGLTEDHPTLTTYFEGEIIGSKYTFLTQHQDWGSNDKVDLTHWAKFSSFRPFSKK 223
                    79******************************************************************************************7666 PP

  Vac_ImportDeg  97 .........dlenkelifmrwkekflvpdervksiegasfeGfYYivldqstgsieGlYyhkksekfqqLeLkpv 162
                             +l+++e ifmrwke+flvpd+rv++i+gasfeGfYYi+++q +g+++G+Y+h+ksekfqqLeLk+v
     KHJ34763.1 224 akkgkltipHLTQRENIFMRWKEHFLVPDHRVRTISGASFEGFYYICFNQIHGTVSGIYFHAKSEKFQQLELKHV 298
                    99999999999999**********************************************************986 PP

>> PM0188  Sialyltransferase PMO188
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   8.5e-07    0.0076     104     186 ..     110     197 ..      77     204 .. 0.83

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 8.5e-07
                 ...HHHTT..TEEEEEEEEE--SSHHHHHHHT.TTTS-HHHHHHH...HHHHHHHHHHHS----S-HHHHTT-GGGTS-EEEEES-HH CS
      PM0188 104 litqdykh..kvsilrlklyddGseeivaleklakakdleaeikq...ekkqlsellvkgkikldnptlarylWqklfeskyhllsdd 186
                 lit+d+ +   + +    +   Gs    ++++  ++ d++ eik+   ++  l  +l  + +  d ptl+ y+ ++++ sky +l+++
  KHJ34763.1 110 LITYDFSYirLIQTSSSSFLRPGSRFKGTQQSERQVYDVQVEIKYvdmRESFLCGYLRIQGLTEDHPTLTTYFEGEIIGSKYTFLTQH 197
                 577777775457777889999***********99*********973325677899999999999*********************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2286.67
//
Query:       KHJ34764.1  [L=77]
Description: putative mago nashi domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.2e-39  134.3   0.1    3.4e-39  134.2   0.1    1.0  1  Mago_nashi  Mago nashi protein


Domain annotation for each model (and alignments):
>> Mago_nashi  Mago nashi protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.2   0.1   1.9e-43   3.4e-39      66     142 .]       1      77 []       1      77 [] 0.99

  Alignments for each domain:
  == domain 1  score: 134.2 bits;  conditional E-value: 1.9e-43
  Mago_nashi  66 lkeddakwpkkdkvgkqeleiklgkehisfetakigslvdvqesedpeGlrvfyylvqDlkalvfslislhfkikPi 142
                 +kedd+kwp+k+k+g+qelei+lg+ehisfetakigslvdv+es+dpeGlrvfyylvqDlkalvfslislhfkikPi
  KHJ34764.1   1 MKEDDSKWPQKNKDGRQELEIRLGSEHISFETAKIGSLVDVTESQDPEGLRVFYYLVQDLKALVFSLISLHFKIKPI 77 
                 69**************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (77 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       317  (0.0176809); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.22s 00:00:00.56 Elapsed: 00:00:00.37
# Mc/sec: 625.16
//
Query:       KHJ34765.1  [L=452]
Description: putative c2h2 and c2hc zinc finger [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.7e-22   76.9  26.9    3.6e-05   24.0   1.7    4.9  4  zf-C2H2          Zinc finger, C2H2 type
    3.2e-20   71.6  25.3    1.7e-06   28.2   1.2    5.4  5  zf-H2C2_2        Zinc-finger double domain
    2.7e-13   49.5  23.7     0.0042   17.8   1.3    4.8  4  zf-C2H2_4        C2H2-type zinc finger
    7.6e-06   26.1   0.2         12    6.3   0.0    5.2  5  zf-C2H2_jaz      Zinc-finger double-stranded RNA-binding
     0.0051   16.4   2.0        1.2    8.8   0.2    3.2  3  zf_UBZ           Ubiquitin-Binding Zinc Finger
     0.0062   16.9   9.6         17    5.9   0.2    5.3  5  zf-met           Zinc-finger of C2H2 type
  ------ inclusion threshold ------
       0.02   14.6   0.8       0.02   14.6   0.8    4.1  5  zf-C2H2_11       zinc-finger C2H2-type
      0.084   13.0   6.3        1.3    9.2   0.5    2.7  2  zf-CRD           Cysteine rich domain with multizinc binding 
       0.13   11.7   1.8         15    5.1   0.1    3.4  3  zf-ribbon_3      zinc-ribbon domain
       0.18   11.5   3.4          2    8.1   0.2    2.4  2  zf-DNA_Pol       DNA Polymerase alpha zinc finger
       0.21   12.3   1.8         22    5.8   0.6    3.3  3  FOXP-CC          FOXP coiled-coil domain
       0.24   11.4   7.2        4.4    7.3   0.4    3.4  3  zf-C2HC_2        zinc-finger of a C2HC-type
       0.39   10.9   8.1        5.9    7.1   0.9    3.2  4  Zn-ribbon_8      Zinc ribbon domain
        0.4   10.7   9.8       0.82    9.7   0.6    2.8  2  Ogr_Delta        Ogr/Delta-like zinc finger
       0.93    9.5   3.6        6.4    6.8   0.1    3.4  4  zf-LYAR          LYAR-type C2HC zinc finger
        1.9    8.6   6.0        4.7    7.3   0.1    3.3  4  ADK_lid          Adenylate kinase, active site lid
        3.2    7.9   8.7         89    3.2   8.7    2.4  1  DZR              Double zinc ribbon
        3.7    8.1   7.2        2.9    8.5   1.8    2.8  2  Zn_ribbon_recom  Recombinase zinc beta ribbon domain
        7.5    6.7  10.4       0.85    9.7   0.5    3.5  4  XPA_N            XPA protein N-terminal
        8.7    6.6   8.3         23    5.2   0.0    3.6  4  DUF2256          Uncharacterized protein conserved in bacteri


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.2   4.6e-08   4.1e-05       1      23 []     127     149 ..     127     149 .. 0.98
   2 !   21.7   1.5   2.1e-07   0.00019       1      23 []     155     179 ..     155     179 .. 0.96
   3 !   24.0   1.7   4.1e-08   3.6e-05       1      23 []     185     207 ..     185     207 .. 0.96
   4 !   23.3   1.8   6.7e-08     6e-05       1      23 []     213     237 ..     213     237 .. 0.98

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 4.6e-08
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 ++C+ Cgk F r+s+L rH r+H
  KHJ34765.1 127 FPCSSCGKAFARRSDLARHERIH 149
                 89*******************99 PP

  == domain 2  score: 21.7 bits;  conditional E-value: 2.1e-07
                 EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                 ++C+   Cgk F ++s L++H+r+H
  KHJ34765.1 155 HVCDhpNCGKQFIQRSALTVHMRVH 179
                 689999******************9 PP

  == domain 3  score: 24.0 bits;  conditional E-value: 4.1e-08
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 + C+ Cgk+F+++s+L rH+r+H
  KHJ34765.1 185 HMCERCGKPFSDSSSLARHRRIH 207
                 67********************9 PP

  == domain 4  score: 23.3 bits;  conditional E-value: 6.7e-08
                 EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                 ykCp  dC k+F+r+  L+rH+  H
  KHJ34765.1 213 YKCPyaDCQKTFTRRTTLTRHQINH 237
                 9*********************998 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.3   0.00089       0.8      12      25 ..     124     137 ..     119     138 .. 0.86
   2 !   18.7   0.2   1.9e-06    0.0017       1      24 [.     141     166 ..     141     168 .. 0.93
   3 !   26.0   0.9   9.4e-09   8.4e-06       1      22 [.     171     192 ..     171     195 .. 0.92
   4 !   28.2   1.2   1.9e-09   1.7e-06       1      26 []     199     226 ..     199     226 .. 0.93
   5 ?    4.0   0.2     0.087        78       2      11 ..     230     239 ..     229     240 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00089
   zf-H2C2_2  12 ekpyeCplCdkaFk 25 
                 +k + C++C+kaF+
  KHJ34765.1 124 PKAFPCSSCGKAFA 137
                 567**********8 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 1.9e-06
   zf-H2C2_2   1 nLrrHirkHtgekpyeCp..lCdkaF 24 
                 +L rH r H g +p+ C+   C+k F
  KHJ34765.1 141 DLARHERIHSGIRPHVCDhpNCGKQF 166
                 589****************99***99 PP

  == domain 3  score: 26.0 bits;  conditional E-value: 9.4e-09
   zf-H2C2_2   1 nLrrHirkHtgekpyeCplCdk 22 
                 +L+ H+r+Htgekp+ C+ C+k
  KHJ34765.1 171 ALTVHMRVHTGEKPHMCERCGK 192
                 6899****************99 PP

  == domain 4  score: 28.2 bits;  conditional E-value: 1.9e-09
   zf-H2C2_2   1 nLrrHirkHtgekpyeCp..lCdkaFkt 26 
                 +L rH r H g++py+Cp   C k+F++
  KHJ34765.1 199 SLARHRRIHSGKRPYKCPyaDCQKTFTR 226
                 589***************988*****85 PP

  == domain 5  score: 4.0 bits;  conditional E-value: 0.087
   zf-H2C2_2   2 LrrHirkHtg 11 
                 L+rH+ +Htg
  KHJ34765.1 230 LTRHQINHTG 239
                 89*******9 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.2   5.7e-06    0.0051       1      23 [.     127     149 ..     127     150 .. 0.96
   2 !   12.0   1.1   0.00035      0.31       2      23 ..     156     179 ..     155     180 .. 0.93
   3 !   17.8   1.3   4.6e-06    0.0042       1      23 [.     185     207 ..     185     208 .. 0.93
   4 !   16.6   0.8   1.1e-05      0.01       1      23 [.     213     237 ..     213     238 .. 0.96

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 5.7e-06
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 f+C+ Cgk F ++++L rH + h
  KHJ34765.1 127 FPCSSCGKAFARRSDLARHERIH 149
                 89******************999 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 0.00035
   zf-C2H2_4   2 kCpi..CgksFsskkaLlrHlkth 23 
                  C++  Cgk F  ++aL  H++ h
  KHJ34765.1 156 VCDHpnCGKQFIQRSALTVHMRVH 179
                 799999****************99 PP

  == domain 3  score: 17.8 bits;  conditional E-value: 4.6e-06
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 + C+ Cgk+Fs++++L rH + h
  KHJ34765.1 185 HMCERCGKPFSDSSSLARHRRIH 207
                 57******************999 PP

  == domain 4  score: 16.6 bits;  conditional E-value: 1.1e-05
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkth 23 
                 +kCp+  C+k+F+++++L rH  +h
  KHJ34765.1 213 YKCPYadCQKTFTRRTTLTRHQINH 237
                 89********************999 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.032        29       2      22 ..     127     147 ..     126     147 .. 0.92
   2 ?    3.7   0.0     0.089        80       7      22 ..     162     177 ..     160     177 .. 0.92
   3 ?    6.3   0.0     0.013        12       2      21 ..     185     204 ..     184     205 .. 0.91
   4 ?    3.6   0.1     0.092        83       7      21 ..     220     234 ..     218     237 .. 0.92
   5 ?   -0.3   0.0       1.7   1.5e+03      10      23 ..     312     325 ..     310     326 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.032
                  CBBTTTTBBBSSHHHHHCCTT CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHlk 22 
                  f C  C K F   ++l  H++
   KHJ34765.1 127 FPCSSCGKAFARRSDLARHER 147
                  67*****************86 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.089
                  TTBBBSSHHHHHCCTT CS
  zf-C2H2_jaz   7 CdKyFksenaldnHlk 22 
                  C K+F+  +al  H++
   KHJ34765.1 162 CGKQFIQRSALTVHMR 177
                  **************96 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.013
                  CBBTTTTBBBSSHHHHHCCT CS
  zf-C2H2_jaz   2 fYCvlCdKyFksenaldnHl 21 
                  + C+ C K F+++++l  H 
   KHJ34765.1 185 HMCERCGKPFSDSSSLARHR 204
                  78999*************97 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.092
                  TTBBBSSHHHHHCCT CS
  zf-C2H2_jaz   7 CdKyFksenaldnHl 21 
                  C+K+F    +l  H+
   KHJ34765.1 220 CQKTFTRRTTLTRHQ 234
                  ************996 PP

  == domain 5  score: -0.3 bits;  conditional E-value: 1.7
                  BBSSHHHHHCCTTS CS
  zf-C2H2_jaz  10 yFksenaldnHlkS 23 
                   ++s  +l  Hl+S
   KHJ34765.1 312 SYISNTSLPSHLRS 325
                  689999******99 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.0     0.014        13       3      20 ..     127     145 ..     125     146 .. 0.80
   2 ?   -2.6   0.0       4.8   4.3e+03       6      13 ..     160     167 ..     160     173 .. 0.79
   3 !    8.8   0.2    0.0013       1.2       5      19 ..     187     202 ..     184     204 .. 0.81

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.014
      zf_UBZ   3 ylCerCgkeipes.elqEH 20 
                 ++C+ Cgk +    +l+ H
  KHJ34765.1 127 FPCSSCGKAFARRsDLARH 145
                 89******99877677666 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 4.8
      zf_UBZ   6 erCgkeip 13 
                 + Cgk++ 
  KHJ34765.1 160 PNCGKQFI 167
                 57***985 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0013
      zf_UBZ   5 CerCgkeipes.elqE 19 
                 CerCgk++++s +l+ 
  KHJ34765.1 187 CERCGKPFSDSsSLAR 202
                 *********9866655 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.024        22       3      21 ..     129     147 ..     127     149 .. 0.91
   2 ?   -0.6   0.1       2.2   1.9e+03       6      21 ..     162     177 ..     162     179 .. 0.91
   3 ?    5.9   0.2     0.019        17       2      19 ..     186     203 ..     185     207 .. 0.91
   4 ?    5.6   0.1     0.024        22       6      19 ..     220     233 ..     218     234 .. 0.92
   5 ?    1.1   0.1      0.65   5.8e+02       9      22 ..     312     325 ..     310     325 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.024
      zf-met   3 CelCnvtfnsesqlksHlq 21 
                 C+ C + f  +s+l  H +
  KHJ34765.1 129 CSSCGKAFARRSDLARHER 147
                 *****************87 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 2.2
      zf-met   6 CnvtfnsesqlksHlq 21 
                 C ++f  +s+l  H++
  KHJ34765.1 162 CGKQFIQRSALTVHMR 177
                 99********999997 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.019
      zf-met   2 yCelCnvtfnsesqlksH 19 
                 +Ce C + f++ s+l  H
  KHJ34765.1 186 MCERCGKPFSDSSSLARH 203
                 6***************99 PP

  == domain 4  score: 5.6 bits;  conditional E-value: 0.024
      zf-met   6 CnvtfnsesqlksH 19 
                 C++tf+ +++l  H
  KHJ34765.1 220 CQKTFTRRTTLTRH 233
                 **********9888 PP

  == domain 5  score: 1.1 bits;  conditional E-value: 0.65
      zf-met   9 tfnsesqlksHlqG 22 
                 ++ s ++l sHl++
  KHJ34765.1 312 SYISNTSLPSHLRS 325
                 678999******98 PP

>> zf-C2H2_11  zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.2    0.0061       5.4       6      26 ..     128     148 ..     125     149 .. 0.91
   2 ?   -2.5   0.1         5   4.5e+03      10      25 ..     162     177 ..     161     179 .. 0.78
   3 ?   14.6   0.8   2.2e-05      0.02       6      26 ..     186     206 ..     183     207 .. 0.93
   4 ?    0.9   0.2      0.46   4.1e+02       9      23 ..     219     233 ..     213     237 .. 0.85
   5 ?   -3.4   0.3       9.7   8.7e+03      14      25 ..     313     324 ..     312     325 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.0061
  zf-C2H2_11   6 qCleCGlcftSqlsLsRHlfI 26 
                  C  CG  f+    L RH +I
  KHJ34765.1 128 PCSSCGKAFARRSDLARHERI 148
                 5*****************988 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 5
  zf-C2H2_11  10 CGlcftSqlsLsRHlf 25 
                 CG  f    +L  H++
  KHJ34765.1 162 CGKQFIQRSALTVHMR 177
                 8888888888888987 PP

  == domain 3  score: 14.6 bits;  conditional E-value: 2.2e-05
  zf-C2H2_11   6 qCleCGlcftSqlsLsRHlfI 26 
                  C  CG  f+ + sL RH++I
  KHJ34765.1 186 MCERCGKPFSDSSSLARHRRI 206
                 5*******************9 PP

  == domain 4  score: 0.9 bits;  conditional E-value: 0.46
  zf-C2H2_11   9 eCGlcftSqlsLsRH 23 
                 +C   ft    L RH
  KHJ34765.1 219 DCQKTFTRRTTLTRH 233
                 69999********** PP

  == domain 5  score: -3.4 bits;  conditional E-value: 9.7
  zf-C2H2_11  14 ftSqlsLsRHlf 25 
                 + S  sL  Hl+
  KHJ34765.1 313 YISNTSLPSHLR 324
                 669999999986 PP

>> zf-CRD  Cysteine rich domain with multizinc binding regions
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.7     0.015        13      22      53 ..     128     165 ..     121     181 .. 0.77
   2 ?    9.2   0.5    0.0014       1.3      22      87 ..     186     251 ..     178     269 .. 0.87

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.015
      zf-CRD  22 tCtaCgqlmPkrpeagvp......qqCelCkrpfCnlY 53 
                  C++Cg++++ r++  +        + ++C++p C+  
  KHJ34765.1 128 PCSSCGKAFARRSDLARHerihsgIRPHVCDHPNCGKQ 165
                 5***********554443355556889********865 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0014
      zf-CRD  22 tCtaCgqlmPkrpeagvpqqCelCkrpfCnlYwkgcsraecs.glLkpieekliekipeevlegnev 87 
                  C+ Cg+++ + ++  + ++ +  krp+ + Y+ +c+++ +  ++L++++ +++ ++ e ++  n v
  KHJ34765.1 186 MCERCGKPFSDSSSLARHRRIHSGKRPYKCPYA-DCQKTFTRrTTLTRHQINHTGTVEEAAVATNAV 251
                 5***********999999**********99***.9999988735699**999999999999888876 PP

>> zf-ribbon_3  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1     0.017        15       4      16 ..     128     141 ..     126     143 .. 0.80
   2 ?    3.0   0.0     0.079        71       6      15 ..     160     170 ..     160     173 .. 0.74
   3 ?    0.5   0.1      0.49   4.4e+02       5      11 ..     187     193 ..     186     199 .. 0.62

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.017
  zf-ribbon_3   4 rCPnCGa.plssdd 16 
                   C++CG+  ++ +d
   KHJ34765.1 128 PCSSCGKaFARRSD 141
                  5*****98877666 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.079
  zf-ribbon_3   6 PnCGa.plssd 15 
                  PnCG+  ++ +
   KHJ34765.1 160 PNCGKqFIQRS 170
                  89999668766 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.49
  zf-ribbon_3   5 CPnCGap 11 
                  C +CG+p
   KHJ34765.1 187 CERCGKP 193
                  6667774 PP

>> zf-DNA_Pol  DNA Polymerase alpha zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.2    0.0022         2       5      62 ..     115     173 ..     111     186 .. 0.78
   2 ?    3.9   0.3     0.045        40      19      61 ..     187     229 ..     183     246 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0022
                 -TTTTTT---EEEE-TTT--EEEE-SSS--S.SEEEETTEEEET..TT--B--HHHH.H CS
  zf-DNA_Pol   5 deerFkdceplelrCpsCkeefefegvfesaeeekvtasglrCsnesCkaslstasl.v 62 
                 d+ r ++ +p  + C+sC++ f  ++  +++e+ ++  +   C +++C +++ + s+ +
  KHJ34765.1 115 DSRRSDNPAPKAFPCSSCGKAFARRSDLARHERIHSGIRPHVCDHPNCGKQFIQRSAlT 173
                 55666666777899***********99999989999999999********995544323 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.045
                 -TTT--EEEE-SSS--S.SEEEETTEEEET..TT--B--HHHH CS
  zf-DNA_Pol  19 CpsCkeefefegvfesaeeekvtasglrCsnesCkaslstasl 61 
                 C++C++ f+  +  +++++ ++ ++  +C+ ++C+++++  ++
  KHJ34765.1 187 CERCGKPFSDSSSLARHRRIHSGKRPYKCPYADCQKTFTRRTT 229
                 99****99999999999899999999***********965544 PP

>> FOXP-CC  FOXP coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.6     0.024        22       6      27 ..     156     177 ..     153     190 .. 0.86
   2 ?   -1.3   0.0         4   3.6e+03      12      26 ..     190     204 ..     183     208 .. 0.87
   3 ?    3.4   0.0      0.13   1.2e+02       7      39 ..     215     248 ..     212     271 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.024
     FOXP-CC   6 vCkWPgCekvledveeflkhln 27 
                 vC+ P+C k + + ++++ h++
  KHJ34765.1 156 VCDHPNCGKQFIQRSALTVHMR 177
                 8*****************9986 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 4
     FOXP-CC  12 Cekvledveeflkhl 26 
                 C k ++d++++ +h 
  KHJ34765.1 190 CGKPFSDSSSLARHR 204
                 999********9995 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.13
     FOXP-CC   7 CkWPgCekvledveeflkh.lnseHalddkstaq 39 
                 C   +C+k ++  +++++h +n++ ++++ ++a 
  KHJ34765.1 215 CPYADCQKTFTRRTTLTRHqINHTGTVEEAAVAT 248
                 88889*************9556777777766664 PP

>> zf-C2HC_2  zinc-finger of a C2HC-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.4    0.0049       4.4       4      23 ..     128     148 ..     127     148 .. 0.87
   2 ?    2.1   0.0      0.21   1.9e+02       6      22 ..     160     177 ..     160     178 .. 0.77
   3 ?    3.5   0.8     0.076        68       5      23 ..     187     206 ..     187     206 .. 0.93

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0049
   zf-C2HC_2   4 pCpkCgRsF.npdrlekHepv 23 
                 pC  Cg  F   + l++He++
  KHJ34765.1 128 PCSSCGKAFaRRSDLARHERI 148
                 9********888889999876 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.21
   zf-C2HC_2   6 pkCgRsF.npdrlekHep 22 
                 p+Cg +F   ++l +H++
  KHJ34765.1 160 PNCGKQFiQRSALTVHMR 177
                 89*****77777777765 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.076
   zf-C2HC_2   5 CpkCgRsF.npdrlekHepv 23 
                 C+ Cg  F  +++l++H ++
  KHJ34765.1 187 CERCGKPFsDSSSLARHRRI 206
                 99***************875 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.9    0.0066       5.9       6      34 ..     127     164 ..     125     170 .. 0.72
   2 ?    4.5   2.6     0.044        39      10      35 ..     161     193 ..     157     198 .. 0.80
   3 ?    5.8   1.2     0.017        15       8      34 ..     187     222 ..     185     228 .. 0.73
   4 ?   -0.3   0.1       1.3   1.2e+03       6      18 ..     213     227 ..     212     233 .. 0.72

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0066
  Zn-ribbon_8   6 YrCeeCghefe.........vlqsisdaplta.CPeCgs 34 
                  + C +Cg+ f          +++s   +p ++  P+Cg+
   KHJ34765.1 127 FPCSSCGKAFArrsdlarheRIHS-GIRPHVCdHPNCGK 164
                  66********98888876644443.34567777999998 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.044
  Zn-ribbon_8  10 eCghefe......vlqsisdaplta.CPeCgse 35 
                  +Cg++f       v ++++  ++++ C +Cg++
   KHJ34765.1 161 NCGKQFIqrsaltVHMRVHTGEKPHmCERCGKP 193
                  699999888888766667788888999999985 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.017
  Zn-ribbon_8   8 CeeCghefe......vlqsisdaplta.CP..eCgs 34 
                  Ce+Cg+ f       + ++i+  + +  CP  +C++
   KHJ34765.1 187 CERCGKPFSdssslaRHRRIHSGKRPYkCPyaDCQK 222
                  *********999887666666667777798445655 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 1.3
  Zn-ribbon_8   6 YrCee..Cghefevl 18 
                  Y+C    C+++f+++
   KHJ34765.1 213 YKCPYadCQKTFTRR 227
                  777544499999865 PP

>> Ogr_Delta  Ogr/Delta-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.6   0.00091      0.82       2      39 ..     129     168 ..     128     174 .. 0.92
   2 ?    4.3   2.8     0.043        39       2      45 ..     187     232 ..     186     233 .. 0.89

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00091
   Ogr_Delta   2 CPhCgapaaartsrnlskdvre..ryyqCsnfeCgatfva 39 
                 C  Cg++ a r+  + ++      r ++C+ ++Cg +f+ 
  KHJ34765.1 129 CSSCGKAFARRSDLARHERIHSgiRPHVCDHPNCGKQFIQ 168
                 9*****************999999***********99975 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.043
   Ogr_Delta   2 CPhCgapaaartsrnlskdvre..ryyqCsnfeCgatfvaaeeier 45 
                 C  Cg+p   ++s + ++      r y C   +C  tf++  + +r
  KHJ34765.1 187 CERCGKPFSDSSSLARHRRIHSgkRPYKCPYADCQKTFTRRTTLTR 232
                 889**********99999888777***************9988776 PP

>> zf-LYAR  LYAR-type C2HC zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.46   4.1e+02       2      17 ..     128     144 ..     127     146 .. 0.73
   2 ?   -1.7   0.0       3.2   2.9e+03       6      12 ..     162     168 ..     161     173 .. 0.81
   3 ?   -0.8   0.1       1.7   1.5e+03       5      14 ..     189     199 ..     186     204 .. 0.71
   4 ?    6.8   0.1    0.0071       6.4       5      18 ..     219     233 ..     218     235 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.46
     zf-LYAR   2 sCiDCsktFdg.deyka 17 
                  C  C+k F +  +   
  KHJ34765.1 128 PCSSCGKAFARrSDLAR 144
                 5889*****98555555 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 3.2
     zf-LYAR   6 CsktFdg 12 
                 C+k+F +
  KHJ34765.1 162 CGKQFIQ 168
                 *****76 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 1.7
     zf-LYAR   5 DCsktFdg.de 14 
                  C+k F++  +
  KHJ34765.1 189 RCGKPFSDsSS 199
                 5*****99444 PP

  == domain 4  score: 6.8 bits;  conditional E-value: 0.0071
     zf-LYAR   5 DCsktFdg.deykaH 18 
                 DC+ktF++ ++   H
  KHJ34765.1 219 DCQKTFTRrTTLTRH 233
                 9******97777777 PP

>> ADK_lid  Adenylate kinase, active site lid
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0      0.16   1.4e+02      24      36 .]     129     141 ..     117     141 .. 0.80
   2 ?    7.3   0.1    0.0052       4.7       4      35 ..     129     170 ..     127     170 .. 0.68
   3 ?    5.3   1.0     0.022        20       4      30 ..     159     193 ..     156     196 .. 0.80
   4 ?    0.7   1.7       0.6   5.4e+02       3      11 ..     186     194 ..     177     228 .. 0.58

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.16
                 -TTT--.-B--GG CS
     ADK_lid  24 CDkCGepLvqRsD 36 
                 C  CG  + +RsD
  KHJ34765.1 129 CSSCGKAFARRSD 141
                 9999999999998 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0052
                 -TTT--EE........ETTTB--SSTTB-T..TT--.-B--G CS
     ADK_lid   4 CpkCGrsY........hvvfnpPkveglCD..kCGepLvqRs 35 
                 C++CG+ +        h + +    + +CD  +CG +++qRs
  KHJ34765.1 129 CSSCGKAFarrsdlarHERIHSGIRPHVCDhpNCGKQFIQRS 170
                 899999995555555542223444889996447999****97 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.022
                 -TTT--EE........ETTTB--SSTTB-TTT--. CS
     ADK_lid   4 CpkCGrsY........hvvfnpPkveglCDkCGep 30 
                 +p+CG+ +        h++ +   ++  C  CG p
  KHJ34765.1 159 HPNCGKQFiqrsaltvHMRVHTGEKPHMCERCGKP 193
                 78999999888888887666777889999999988 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 0.6
                 E-TTT--EE CS
     ADK_lid   3 vCpkCGrsY 11 
                 +C+ CG+ +
  KHJ34765.1 186 MCERCGKPF 194
                 466666666 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   8.7       0.1        89       1      41 [.     129     197 ..     119     229 .. 0.69

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.1
         DZR   1 CpqCgee............lppdar..fC..seCgtklkavaa............edrCpsCgekvdpe 41 
                 C++Cg++            ++++ r  +C  ++Cg++  + +a            +++C +Cg++ +  
  KHJ34765.1 129 CSSCGKAfarrsdlarherIHSGIRphVCdhPNCGKQFIQRSAltvhmrvhtgekPHMCERCGKPFSDS 197
                 555555555555555555533332222552235777766555588888888888888888888886654 PP

>> Zn_ribbon_recom  Recombinase zinc beta ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.3      0.58   5.2e+02       8      19 ..     129     140 ..     127     174 .. 0.72
   2 ?    8.5   1.8    0.0032       2.9       8      45 ..     187     236 ..     186     247 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.58
  Zn_ribbon_recom   8 CgeCGspmtrrk 19 
                      C  CG+++ rr+
       KHJ34765.1 129 CSSCGKAFARRS 140
                      999****99986 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0032
  Zn_ribbon_recom   8 CgeCGspmtr.....rkrk...gkr....hyYrCstyrrkgkkCsnhsir 45 
                      C +CG+p++      r+r+   gkr    +y  C+++ +++++ + h i+
       KHJ34765.1 187 CERCGKPFSDssslaRHRRihsGKRpykcPYADCQKTFTRRTTLTRHQIN 236
                      *******9885555422334545556777888898888888678877776 PP

>> XPA_N  XPA protein N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.1      0.28   2.5e+02       4      12 ..     129     137 ..     128     138 .. 0.91
   2 ?   -1.9   0.1       4.1   3.7e+03       6      11 ..     161     166 ..     155     168 .. 0.62
   3 ?    9.7   0.5   0.00095      0.85       3      14 ..     186     197 ..     184     199 .. 0.92
   4 ?   -1.7   0.0       3.4     3e+03       6      12 ..     219     225 ..     218     226 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.28
       XPA_N   4 CdeCgkefl 12 
                 C  Cgk+f+
  KHJ34765.1 129 CSSCGKAFA 137
                 9******97 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 4.1
       XPA_N   6 eCgkef 11 
                  Cgk+f
  KHJ34765.1 161 NCGKQF 166
                 377777 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00095
       XPA_N   3 kCdeCgkefldS 14 
                  C+ Cgk+f dS
  KHJ34765.1 186 MCERCGKPFSDS 197
                 7**********9 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 3.4
       XPA_N   6 eCgkefl 12 
                 +C+k+f 
  KHJ34765.1 219 DCQKTFT 225
                 7****96 PP

>> DUF2256  Uncharacterized protein conserved in bacteria (DUF2256)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.1      0.11        98       9      23 ..     128     142 ..     123     145 .. 0.83
   2 ?   -1.3   0.0       2.8   2.5e+03      11      20 ..     160     169 ..     152     172 .. 0.80
   3 ?    5.2   0.0     0.026        23       9      19 ..     186     196 ..     181     203 .. 0.82
   4 ?    0.4   0.4      0.83   7.4e+02      12      21 ..     219     228 ..     210     233 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.11
     DUF2256   9 iCavCgrpftwRkkW 23 
                 +C  Cg+ f+ R   
  KHJ34765.1 128 PCSSCGKAFARRSDL 142
                 6********999765 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 2.8
     DUF2256  11 avCgrpftwR 20 
                 + Cg++f  R
  KHJ34765.1 160 PNCGKQFIQR 169
                 57****9988 PP

  == domain 3  score: 5.2 bits;  conditional E-value: 0.026
     DUF2256   9 iCavCgrpftw 19 
                 +C  Cg+pf++
  KHJ34765.1 186 MCERCGKPFSD 196
                 7********97 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.83
     DUF2256  12 vCgrpftwRk 21 
                  C++ ft R 
  KHJ34765.1 219 DCQKTFTRRT 228
                 4******996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       763  (0.0425568); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                        24  (0.00133861); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              20  [number of targets reported over threshold]
# CPU time: 0.55u 0.20s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 3449.04
//
Query:       KHJ34766.1  [L=688]
Description: putative pathway-specific nitrogen regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (688 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1555  (0.086731); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.42
# Mc/sec: 4879.02
//
Query:       KHJ34767.1  [L=111]
Description: hypothetical protein EV44_g3280 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (111 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       251  (0.0139997); expected 358.6 (0.02)
Passed bias filter:                      221  (0.0123264); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 826.22
//
Query:       KHJ34768.1  [L=439]
Description: putative 26s protease regulatory subunit 7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-40  137.6   0.0    5.4e-40  136.9   0.0    1.4  1  AAA           ATPase family associated with various cellular 
    1.6e-06   27.8   0.0    3.9e-06   26.5   0.0    1.6  1  AAA_lid_3     AAA+ lid domain
    0.00016   22.0   0.0     0.0069   16.7   0.0    2.4  2  AAA_22        AAA domain
    0.00016   21.7   0.0    0.00048   20.1   0.0    1.9  1  AAA_5         AAA domain (dynein-related subfamily)
    0.00033   20.8   0.0      0.001   19.2   0.0    1.8  2  AAA_2         AAA domain (Cdc48 subfamily)
    0.00089   19.7   0.1      0.014   15.8   0.0    2.2  2  AAA_16        AAA ATPase domain
     0.0018   17.5   0.0     0.0028   16.8   0.0    1.3  1  DUF815        Protein of unknown function (DUF815)
     0.0089   15.8   0.0      0.018   14.8   0.0    1.4  1  RuvB_N        Holliday junction DNA helicase RuvB P-loop doma
  ------ inclusion threshold ------
      0.012   15.8   0.1      0.063   13.5   0.0    2.0  2  AAA_28        AAA domain
      0.037   13.5   0.0      0.097   12.2   0.0    1.7  1  AAA_7         P-loop containing dynein motor region
       0.05   13.8   0.0      0.093   12.9   0.0    1.4  1  AAA_33        AAA domain
       0.06   13.7   0.0       0.16   12.4   0.0    1.7  1  RNA_helicase  RNA helicase
      0.084   12.7   0.0       0.16   11.9   0.0    1.4  1  AAA_3         ATPase family associated with various cellular 
       0.11   12.5   0.0       0.24   11.4   0.0    1.6  1  AAA_14        AAA domain
       0.11   12.2   0.1       0.28   10.9   0.1    1.7  1  AAA_24        AAA domain
       0.14   12.7   0.0       0.51   10.9   0.0    2.0  2  AAA_18        AAA domain


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.9   0.0   4.8e-43   5.4e-40       2     131 ..     219     350 ..     218     351 .. 0.95

  Alignments for each domain:
  == domain 1  score: 136.9 bits;  conditional E-value: 4.8e-43
                 EEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH...TTCCCHHHHHHHHHHHHHHHHTT CS
         AAA   2 llyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgvk 97 
                 llyGppGtGKTl+a+ava+ ++++f+++ gsel++kyvge+++ +relf+ a++k+  +i+f+DEida++++r     + ++e +r++ +L+t+ldg++
  KHJ34768.1 219 LLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK-ACIIFFDEIDAVGGARiddGAGGDNEVQRTMLELITQLDGFD 316
                 9*****************************************************98.9****************96666889999************** PP

                 TSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  98 kkeskvivigatnrpdkldpallr.gRfdrkieie 131
                  + +++ v+ atnrp++ldpal+r gR+drkie++
  KHJ34768.1 317 AR-GNIKVMFATNRPSTLDPALMRpGRIDRKIEFS 350
                 *7.66***************************997 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   3.5e-09   3.9e-06       7      43 ..     379     415 ..     373     417 .. 0.92

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 3.5e-09
   AAA_lid_3   7 LAerTeGySGADlaalcreAallAlrrgikeitmedf 43 
                 + +++++ +GA+l ++c eA++ A+r  +k  t++df
  KHJ34768.1 379 ISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDF 415
                 7889**************************99***99 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   6.2e-06    0.0069       8      30 ..     218     240 ..     213     248 .. 0.86
   2 ?    3.2   0.0     0.087        98      57     127 ..     244     325 ..     239     329 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 6.2e-06
      AAA_22   8 lvvtGesGtGKTtllrrlleqld 30 
                  +++G++GtGKT+++r ++++ d
  KHJ34768.1 218 ALLYGPPGTGKTLCARAVANRTD 240
                 589****************9984 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.087
      AAA_22  57 lrellralglelkaerlsseellealeqalraravielliiDEaqhlr....s..........eealeeLrsllnl.srkgvqliL 127
                  r + ++l ++  +   +  ++++ l + +r++++  ++  DE++ +                 ++le + +l  + +r ++++ +
  KHJ34768.1 244 IRVIGSELVQKYVG---EGARMVRELFEMARTKKA-CIIFFDEIDAVGgariDdgaggdnevqRTMLELITQLDGFdARGNIKVMF 325
                 55555555555555...666777777777888888.9*********9766551556666777788888887666666777777765 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   4.3e-07   0.00048       3      77 ..     219     286 ..     217     339 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 4.3e-07
                 EEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------..G-SEEEEESGGG- CS
       AAA_5   3 lLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar..egeilvlDEvera 77 
                 lL GppGtgK+  a+ +a ++ +++  v +++      l++++   +g +     +l + ar  +++i+++DE++ +
  KHJ34768.1 219 LLYGPPGTGKTLCARAVANRTDATFIRVIGSE------LVQKYVG-EGARMV--RELFEMARtkKACIIFFDEIDAV 286
                 8*********************9999999876......8888883.333333..44444444459*********965 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       6.4   7.2e+03      17      50 ..      79     113 ..      71     127 .. 0.66
   2 !   19.2   0.0   9.3e-07     0.001       7     103 ..     219     309 ..     214     325 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 6.4
                 HHHHHHHHHHTT-....-EEEEEGGG---.----T CS
       AAA_2  17 telakalaellfvkkekkliradaselle.eeeve 50 
                 + l +  a+ +++ +e++l +a +++++  ee++e
  KHJ34768.1  79 PHLWDVAADRQRMAEEQPLQVARCTKIISnEEDAE 113
                 55566667777777888888888888887433333 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 9.3e-07
                 EEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG---..----THHHHHHHHHTTT-HHHHTTSEEEEETGGG-----------.--HHHHHHHHHH CS
       AAA_2   7 lllgptgvGktelakalaellfvkkekkliradaselle..eeevehlvsrligappgyvgaeegGivllDEidKihpkessgadv.SregVqrdLLqi 102
                 ll gp g+Gkt+ a+a+a+  ++    ++ir+  sel +    e +++v +l      + + ++  i+++DEid +    ++       ++Vqr +L +
  KHJ34768.1 219 LLYGPPGTGKTLCARAVANRTDA----TFIRVIGSELVQkyVGEGARMVREL----FEMARTKKACIIFFDEIDAVGGA-RIDDGAgGDNEVQRTMLEL 308
                 788******************96....9***999999992222333333333....3455666778**********994.44444414579******99 PP

                 H CS
       AAA_2 103 l 103
                 +
  KHJ34768.1 309 I 309
                 7 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   1.2e-05     0.014      24      50 ..     215     241 ..     187     257 .. 0.76
   2 ?    1.1   0.0      0.42   4.7e+02     124     146 ..     264     285 ..     258     313 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 1.2e-05
      AAA_16  24 pelvllsGesGvGKsslvrellralek 50 
                 p   ll+G++G+GK+  +r+++++  +
  KHJ34768.1 215 PKGALLYGPPGTGKTLCARAVANRTDA 241
                 3789*****************975444 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.42
      AAA_16 124 krllallsrderplvlvlDdlqw 146
                 ++l++ +++ ++  ++++D+++ 
  KHJ34768.1 264 RELFEMART-KKACIIFFDEIDA 285
                 556677777.777********93 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   2.5e-06    0.0028      51     115 ..     213     282 ..     164     285 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 2.5e-06
      DUF815  51 lpannvLLwGarGtGKSslvkallneyaeegLrli..evekedlkelpklvellr...erperfilfvDD 115
                  p + +LL+G  GtGK  + +a+ n++ ++ +r+i  e+ ++ + e  ++v++l    ++++ +i+f D 
  KHJ34768.1 213 DPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIgsELVQKYVGEGARMVRELFemaRTKKACIIFFDE 282
                 467789*****************************88888999999888888765232678899***997 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.0   1.6e-05     0.018      36      93 ..     218     283 ..     212     289 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.6e-05
      RuvB_N  36 vllyGpPGlGkttlakiiakelgvkl.kitsgPvleka.gdlaalltnl......eekdvlfidei 93 
                  llyGpPG Gkt  a+ +a+  ++++ ++  +  ++k  g+ a ++ +l      ++  ++f dei
  KHJ34768.1 218 ALLYGPPGTGKTLCARAVANRTDATFiRVIGSELVQKYvGEGARMVRELfemartKKACIIFFDEI 283
                 69*******************998851555555555532454555444422122234457777777 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       1.3   1.5e+03      54      94 ..      46      88 ..      27     117 .. 0.72
   2 ?   13.5   0.0   5.6e-05     0.063       4      40 ..     220     261 ..     218     281 .. 0.74

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 1.3
      AAA_28 54 afaervleeqleeeaaa..aankvlfcDrglldtlaYaraygg 94
                a   ++le+q++e +a   ++ +v  +D+gl  +  +  a + 
  KHJ34768.1 46 AGPLKRLEQQIKEKQASvnEKIGVKESDTGLAPPHLWDVAADR 88
                5567889999988777766788888888888888777655544 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 5.6e-05
      AAA_28   4 itGgestGKTtlleaLaar....gypvv.pEaareileekla 40 
                 + G+++tGKT  ++a a+r     ++v+  E + +++ e+++
  KHJ34768.1 220 LYGPPGTGKTLCARAVANRtdatFIRVIgSELVQKYVGEGAR 261
                 78***************8876556777777777777766553 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   8.7e-05     0.097      27      69 ..     209     243 ..     201     286 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 8.7e-05
       AAA_7  27 elllknkkpvllvGptGtGKtviikdllkkldkekylsltinf 69 
                 +l ++  k  ll+Gp GtGKt++++ + ++ d         +f
  KHJ34768.1 209 NLGIDPPKGALLYGPPGTGKTLCARAVANRTDA--------TF 243
                 5566667889****************9999982........33 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   8.3e-05     0.093       3      39 ..     219     257 ..     218     281 .. 0.78

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 8.3e-05
      AAA_33   3 llvGlpGsGKstlaerllkklg..avllssdtlrrrlfg 39 
                 ll G+pG+GK+  a+ ++++++  ++++   +l ++++g
  KHJ34768.1 219 LLYGPPGTGKTLCARAVANRTDatFIRVIGSELVQKYVG 257
                 578***************999966666666666666655 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   0.00014      0.16       2      62 ..     219     270 ..     218     286 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 0.00014
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkklklkkkdsvysrnpeddfwdgYtgqevvvidDfgqvk 62 
                   +lyGp+g+GK+++a+ +          +++d +++r   ++ +++Y g+ + ++ ++ ++ 
    KHJ34768.1 219 LLYGPPGTGKTLCARAV---------ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMA 270
                   69**************3.........45567777777888888888877777777766655 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00014      0.16       3      30 ..     219     246 ..     217     280 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00014
       AAA_3   3 llegvPGlaktllvkalakaldlefkri 30 
                 ll g PG++ktl ++a+a+  d++f r+
  KHJ34768.1 219 LLYGPPGTGKTLCARAVANRTDATFIRV 246
                 8999*********************998 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00022      0.24       6      78 ..     219     288 ..     215     325 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00022
      AAA_14   6 vitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqevpe 78 
                 ++ G+  +GKT  ++ ++++       ++ +   +  +k   + +++ ++++e+++++k  ++f+DEi  v +
  KHJ34768.1 219 LLYGPPGTGKTLCARAVANRTD---ATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGG 288
                 789999*******999996666...5555554444444444444467778888765668888******98854 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   0.00025      0.28       5      22 ..     218     235 ..     215     286 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00025
      AAA_24   5 iliyGpsgiGKTtlakel 22 
                  l+yGp+g+GKT +a+  
  KHJ34768.1 218 ALLYGPPGTGKTLCARAV 235
                 589**********99987 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00045      0.51       2      25 ..     219     249 ..     219     315 .. 0.81
   2 ?   -2.5   0.0       6.5   7.2e+03      18      52 ..     379     415 ..     376     432 .. 0.61

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00045
      AAA_18   2 lltGtpGvGKttlakeLskrl.gf......g 25 
                 ll G+pG+GKt  a+++++r+ +       +
  KHJ34768.1 219 LLYGPPGTGKTLCARAVANRTdATfirvigS 249
                 589**************99984335655542 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 6.5
      AAA_18  18 Lskrl.gf.gvnlrdvakenglllevdpealdeskrl 52 
                 +s+++ ++ g +lr+v++e g+   +   ++  +k +
  KHJ34768.1 379 ISRLCpNStGAELRSVCTEAGMFAIRARRKVATEKDF 415
                 5667655588899999999888655555544555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       509  (0.0283898); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        74  (0.00412739); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.57u 0.23s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3193.34
//
Query:       KHJ34769.1  [L=532]
Description: putative t-complex protein 1 subunit delta [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   3.9e-148  494.1  18.2   4.3e-148  494.0  18.2    1.0  1  Cpn60_TCP1    TCP-1/cpn60 chaperonin family
  ------ inclusion threshold ------
      0.087   12.4   0.1       0.24   11.0   0.0    1.8  2  RNA_Me_trans  Predicted SAM-dependent RNA methyltransferase


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  494.0  18.2  4.8e-152  4.3e-148       1     486 [.      35     528 ..      35     532 .] 0.98

  Alignments for each domain:
  == domain 1  score: 494.0 bits;  conditional E-value: 4.8e-152
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHHHHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPaakllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegyekale 99 
                 +ad+v+t+lGP+GmdKm+ n+ g++++TnDG+t+lk++ + hP+ak+lv+++++qd e+GDGTt+vv++ag Ll +aekl+++g+hp++i e +++a++
  KHJ34769.1  35 VADAVRTSLGPRGMDKMITNQKGQTIITNDGNTMLKSMAVMHPTAKMLVDLSSAQDVEAGDGTTSVVVIAGGLLGAAEKLLSKGIHPSVIAESFQRAAS 133
                 689************************************************************************************************ PP

                 HHHHHHHHHXEEBXSCSTT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHH.HCHCCCS.EECSCCCEECCCCEECECTTSEEESEEEESS--SST.TS CS
  Cpn60_TCP1 100 kaleaLkeiaveisseekdreeLlkvartslsskltskeaeelsklvvdAv.klieene.keldlgrikvvkieggsledselveGlvldkgvlsp.dm 195
                 +a+++L e+  ++++   d+++Ll++a+tslssk++s+ +  l+ ++v+A+ k+i+ ++ ++ dl++i+++k+ gg +ed+e+veGl+l++ vl++   
  KHJ34769.1 134 AAVRILHEM--SHQVLLTDTSTLLQAATTSLSSKIVSQYSSLLAPIAVNAItKTIDIKTaENADLKSIRIIKKVGGTIEDTEMVEGLALNQLVLKNgGG 230
                 *********..66666679**********************************9998889*******************************99999778 PP

                 SCEEECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECEEEESS-B.....-HHHHHHHHHCT-EEE-S--HHHHHHH CS
  Cpn60_TCP1 196 pkklenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnvvvcqkgi.....ddlalhflakngilalrrvkkkdlerl 289
                 p ++e+ak+ l++++L+++k++++ ++v++d  +++k++k+e+++l+++++ki+k+++nv+++qk+i     +dl+lhflak +il+++ ++++++e +
  KHJ34769.1 231 PIRMEKAKIGLIQFQLSPPKPDMENQIVVNDYRQMDKILKEERTYLLNMVKKIKKAKCNVLFIQKSIlrdavNDLSLHFLAKLNILCVKDIERDEVEFI 329
                 ******************************************************************999999*************************** PP

                 HHHHT--EBSCGGGGGCGC-EEEEEEEECCETTCCEEEEECE.SSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHHH CS
  Cpn60_TCP1 290 akatGatavssledltpeelGtakkveeekigsekttiieev.ksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakkl 387
                 +k tG++++++++++t+++lG+a+ +ee + +  k++ ++++ + gk+++i+ rga+  +l+e+er+++dAl+vv+++++++ +++GGGa e+e+a++l
  KHJ34769.1 330 CKSTGCKPIADIDSFTEDKLGSADLIEEVQKNGSKFVKVTGTkNAGKTVSIVCRGANSLILEEAERSLHDALCVVRCLVKKRALIAGGGAPEIEIASQL 428
                 ****************************************8835689**************************************************** PP

                 HCCCCTSXCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHHHHHHHHTTXTTEEEETTTTCEEE.CCCCTXEEEHHHHHHHHHHHHHHHHHHHCEEE CS
  Cpn60_TCP1 388 keyaksvsgeeqlaieafakALevipktLaeNaGldpievlaklraahnkgekelgidvesgeiid.lveagvvDplkvkrqalksAteaastiLride 485
                  ++a+ ++g e+++++afa+ALevip tLaeNaGl++i+v+++lr +h++g k++gi+++sg ++d + +++v++pl v ++a+++A+e++++iLrid+
  KHJ34769.1 429 LKQARALKGTEAICWKAFAEALEVIPTTLAENAGLNSIKVVTELRFKHENGLKNAGISIKSGGVKDdIGDEKVLQPLLVSTSAIELAAETVKMILRIDD 527
                 ***************************************************************998799****************************** PP

                 E CS
  Cpn60_TCP1 486 i 486
                 i
  KHJ34769.1 528 I 528
                 9 PP

>> RNA_Me_trans  Predicted SAM-dependent RNA methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   2.6e-05      0.24      46     106 ..      50     110 ..      27     114 .. 0.79
   2 ?   -3.9   0.0      0.94   8.5e+03      17      38 ..     260     281 ..     254     296 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 2.6e-05
  RNA_Me_trans  46 eelkslaklelekesveellkelkevkkekvclLDpkaekelspedaeefdvflfGGIlGd 106
                   + +++++ +++ +++ +++lk++  ++ +  +l D ++ ++++  d+++  v++ GG+lG 
    KHJ34769.1  50 KMITNQKGQTIITNDGNTMLKSMAVMHPTAKMLVDLSSAQDVEAGDGTTSVVVIAGGLLGA 110
                   44555566666666777788888778889999****************************7 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 0.94
  RNA_Me_trans  17 lEYrhiakevgaenliltslsk 38 
                    +Yr++ k +++e+ +l ++ k
    KHJ34769.1 260 NDYRQMDKILKEERTYLLNMVK 281
                   5677777777777544433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       902  (0.0503096); expected 358.6 (0.02)
Passed bias filter:                      576  (0.0321267); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.39
# Mc/sec: 4041.48
//
Query:       KHJ34770.1  [L=500]
Description: putative dna primase large subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      7e-78  261.7   0.0    1.2e-77  260.9   0.0    1.4  1  DNA_primase_lrg  Eukaryotic and archaeal DNA primase, large s


Domain annotation for each model (and alignments):
>> DNA_primase_lrg  Eukaryotic and archaeal DNA primase, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  260.9   0.0   6.6e-82   1.2e-77       2     266 .]     195     480 ..     194     480 .. 0.98

  Alignments for each domain:
  == domain 1  score: 260.9 bits;  conditional E-value: 6.6e-82
                      EEEEEHHHHHHHTT-GGS-EETTEEEE-HHHHHHHHHHHHHHHHHH..........HHGGGSSS---HHHHHHHCT--................ CS
  DNA_primase_lrg   2 fykvpfedvldlvkrrrvllkkGyaylpkeeleslllekfrkrlekalestkeslpeleeeikederekleellealsesyvaed......vqe 89 
                      ++kv++e++++lv++rr l++ G+ay+p +e++s+++++f ++l kal +t+++lp+l    +ed+r  ++++l +ls+s+++ d      ++ 
       KHJ34770.1 195 YFKVDWERIPELVESRRTLIHGGMAYVPSREQLSIVIAEFSSHLDKALIMTSRALPRL----DEDDR--ITPILTHLSKSFTTPDalyssfSTP 282
                      89********************************************************....*****..*******************999999 PP

                      ...TTSSTTGGSHHHHTT--HHHHCCHHHHCCCSS--CHHHHHHHHHHHHCT--CHHHHCCCHCHST...HHHHHHHTHCHCHHHCC-STT--- CS
  DNA_primase_lrg  90 eedskisaknidklakesfPpCmrelleglkknghlkhegrlqltlFlkdiglsldeilelwkeaftr.teekFdkeyrynirhnyGkegkrtn 182
                        +++isa+nid+l+  sfP+Cm++l+++l++++hlk++grlq+ lFlk+igl+l+e+l++w+++f++ t++ F+keyryn+r++yG++g++ n
       KHJ34770.1 283 LPGADISARNIDALS-ASFPLCMQHLHRTLRRDSHLKYYGRLQYSLFLKGIGLNLEESLQFWRSSFNKiTDDVFNKEYRYNVRYAYGDVGGDGN 375
                      99************9.9**********************************************************************9999999 PP

                      .....-----HHHHHHS....TT---S-HHHH..HHHHHHHHHHTT...HHHHHHHHHHHHTT.HHHHHHHHHHHHHS..............-T CS
  DNA_primase_lrg 183 .....yspysCekiltkpppgkgdahgCpfrh.dpdklktlLqeyg.lseediedilesvkegeyqvaCtkvFelthk..............ce 255
                            +p+sC++ilt+  pg+g+ahgCp+rh + d+l  lL+++g +++e ++ + e+ ++++y++aC++vFe +hk               +
       KHJ34770.1 376 rrgrgSTPFSCQRILTEHAPGTGEAHGCPYRHfSVDNLLVLLRSVGiQDQETLRGVKEDKEKTKYHLACNRVFEYVHKsqikkvrdegtwdpAQ 469
                      888999********************************999*****99********************************************99 PP

                      TT-SSCHHHCC CS
  DNA_primase_lrg 256 rdeikhPlqYy 266
                       ++i hP++Y+
       KHJ34770.1 470 LETIVHPNEYF 480
                      99********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       553  (0.0308439); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3596.19
//
Query:       KHJ34771.1  [L=942]
Description: putative ubiquitination network signaling protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0061   17.0   7.3       0.15   12.5   3.0    2.6  2  Spectrin        Spectrin repeat
     0.0081   16.2   1.7     0.0081   16.2   1.7    2.9  3  DUF1664         Protein of unknown function (DUF1664)
  ------ inclusion threshold ------
       0.11   12.8   0.1       0.25   11.6   0.1    1.6  1  CBM26           Starch-binding module 26
        2.8    8.0  10.8        5.5    7.1   0.9    2.5  2  Bap31_Bap29_C   Bap31/Bap29 cytoplasmic coiled-coil domain
        3.2    7.6   9.0        2.8    7.8   0.1    2.9  2  Mt_ATP-synt_D   ATP synthase D chain, mitochondrial (ATP5H)


Domain annotation for each model (and alignments):
>> Spectrin  Spectrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.1     0.005        18      59      98 ..     582     624 ..     578     628 .. 0.84
   2 !   12.5   3.0   4.3e-05      0.15      29      95 ..     671     737 ..     662     741 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.005
                 HHHHHHHHH.HHTT..HTTHHHHHHHHHHHHHHHHHHHHHHHH CS
    Spectrin  59 alnelaekl.ldeg..hsaseeieerleelnerWeeLkelaae 98 
                 ++ ++++kl +d++  +s+ +e++++++ +++ +e L++ +a+
  KHJ34771.1 582 SIAQVGKKLeEDRQrqKSSRKELRAKINSVRKEFERLLTSIAS 624
                 57789999977777656777*****************999876 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 4.3e-05
                 CSSSHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHTTHTTHHHHHHHHHHHHHHHHHHHHH CS
    Spectrin  29 lgkdleevqallkkhkaleaelaa.qqervkalnelaeklldeghsaseeieerleelnerWeeLkel 95 
                 ++++ +e+q + +khk +  e+++ +q+  +++++l+++ll+  +++se  ++rl+ l  ++e+++++
  KHJ34771.1 671 YSESKNEIQLQREKHKNIDSEINSyKQNAEREIQALKSDLLNL-KQKSESRNQRLNILKAKYESVLDA 737
                 56777899****************55555578********988.6999***************99876 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   1.7   2.3e-06    0.0081      39     121 ..     579     661 ..     577     664 .. 0.96
   2 ?    2.6   1.1     0.036   1.3e+02      77     119 ..     691     733 ..     666     739 .. 0.64
   3 ?   -3.4   0.1       2.6   9.5e+03      86     113 ..     767     794 ..     751     801 .. 0.50

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 2.3e-06
     DUF1664  39 lsdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeaveglesklerie 121
                 l+  +++v+k+le+  +  ++ +++L ++i++v k+ +     ++++  + +++r+++++    +++ +ea + l +++ +i+
  KHJ34771.1 579 LKTSIAQVGKKLEEDRQRQKSSRKELRAKINSVRKEFERLLTSIASTGGNDDKMRQKIQQSTLHMKQADEATTILVTQIGNID 661
                 778899*******************************************************************9999999886 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.036
     DUF1664  77 eqkeiskeikeevtevredlseigedvesvkeavegleskler 119
                 e +  +++ ++e++++++dl ++++++es ++  + l++k e+
  KHJ34771.1 691 EINSYKQNAEREIQALKSDLLNLKQKSESRNQRLNILKAKYES 733
                 3344455666677777777777777777777766666666554 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 2.6
     DUF1664  86 keevtevredlseigedvesvkeavegl 113
                 +e ++++++++ e +   ++v +a+e+l
  KHJ34771.1 767 TERLQSINSEIFEGQAAHQTVAAAIETL 794
                 3334444444444444444444444433 PP

>> CBM26  Starch-binding module 26
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1     7e-05      0.25       5      59 ..     494     549 ..     490     558 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 7e-05
                 --TTS-SEEEEEEEEES-----..-TT--B-EEEETTEEEEEETT-SEEEEEEEES CS
       CBM26   5 npsnWsnvyiYiwddspassvke.aWPGvamkkegdgwysytleeeesakvIFnng 59 
                 n+++W+ ++iY+ ++ +++ + +  W Gv    +    y +++ ++ + +vIF+ +
  KHJ34771.1 494 NNASWQPIKIYTMTEAAQKPGPStRWSGVIFGLSPMSNYNFDFISTVDKSVIFSTS 549
                 678****************9999********9999999999999999******876 PP

>> Bap31_Bap29_C  Bap31/Bap29 cytoplasmic coiled-coil domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   0.9    0.0015       5.5       5      48 ..     589     631 ..     582     635 .. 0.78
   2 ?    4.9   3.2    0.0071        25       2      39 ..     691     732 ..     690     744 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0015
  Bap31_Bap29_C   5 kLkkeLkkkkkDlealKkQaeglakEYDrLadehskldesedKK 48 
                    kL++  +++k+  + l+ ++ ++ kE+ rL++  + + +++d+K
     KHJ34771.1 589 KLEEDRQRQKSSRKELRAKINSVRKEFERLLTSIAST-GGNDDK 631
                    455555577899*********************9999.443443 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0071
  Bap31_Bap29_C   2 eiekLkk....eLkkkkkDlealKkQaeglakEYDrLadehs 39 
                    ei+++k+    e+++ k+Dl +lK+++e+ ++  + L  +++
     KHJ34771.1 691 EINSYKQnaerEIQALKSDLLNLKQKSESRNQRLNILKAKYE 732
                    88888998899*****************98876666666655 PP

>> Mt_ATP-synt_D  ATP synthase D chain, mitochondrial (ATP5H)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.1   0.00077       2.8      75     120 ..     572     618 ..     557     625 .. 0.89
   2 ?    2.7   2.3     0.029     1e+02      79     122 ..     671     715 ..     665     722 .. 0.79

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00077
                    --------TTT.THHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH CS
  Mt_ATP-synt_D  75 lkipypedkyt.eevdaeekevkkeikefkeeskkrieelekelekl 120
                     ++pyp+ k + ++v ++ +e+ ++ k+  +e  ++i++++ke e+l
     KHJ34771.1 572 TSSPYPALKTSiAQVGKKLEEDRQRQKSSRKELRAKINSVRKEFERL 618
                    578999988888********************************997 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.029
                    ----TTTTHHH.HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT- CS
  Mt_ATP-synt_D  79 ypedkyteevd.aeekevkkeikefkeeskkrieelekeleklks 122
                    y e+k + +++ ++ k++  ei+++k++++++i+ l++ l +lk+
     KHJ34771.1 671 YSESKNEIQLQrEKHKNIDSEINSYKQNAEREIQALKSDLLNLKQ 715
                    66777774444156678899****************999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (942 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1746  (0.0973841); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.87u 0.27s 00:00:01.14 Elapsed: 00:00:00.44
# Mc/sec: 6364.34
//
Query:       KHJ34772.1  [L=585]
Description: putative branchpoint-bridging protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.6e-43  147.6   0.8    3.5e-43  146.5   0.8    1.6  1  SF1-HH     Splicing factor 1 helix-hairpin domain
    2.5e-11   43.1  11.5      2e-05   24.4   3.6    2.3  2  zf-CCHC    Zinc knuckle
    1.1e-07   31.6   0.1      2e-07   30.7   0.1    1.5  1  KH_1       KH domain
    4.1e-06   26.7   6.2     0.0014   18.5   2.9    2.6  2  zf-CCHC_3  Zinc knuckle
     0.0029   17.3   6.0       0.44   10.3   0.4    2.5  2  zf-CCHC_4  Zinc knuckle
  ------ inclusion threshold ------
      0.057   13.3   7.5       0.61   10.0   0.7    2.8  2  zf-CCHC_6  Zinc knuckle
        2.3    8.1  12.0       0.21   11.5   1.8    2.4  2  zf-CCHC_2  Zinc knuckle


Domain annotation for each model (and alignments):
>> SF1-HH  Splicing factor 1 helix-hairpin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.5   0.8   1.4e-46   3.5e-43       2     113 .]      71     180 ..      70     180 .. 0.94

  Alignments for each domain:
  == domain 1  score: 146.5 bits;  conditional E-value: 1.4e-46
      SF1-HH   2 ksrWgeeeekekkakieglptaipgnltqeqleayllqlrieeitrkLrtgdlvppeeeeRspSPpPvYdanGkRtntrevrvrkkLekerhelieeav 100
                 ++rW+++++ +k a  +glptai +n+t+eqleay l+lrieei++kLr+ d+vp++  +RspSPpP+Yd+ G+R+ntre+r+rk+Le+erh+lie+a+
  KHJ34772.1  71 RNRWADATD-NKAAGLMGLPTAIMANMTSEQLEAYTLHLRIEEISQKLRIDDVVPAD-GDRSPSPPPQYDNFGRRVNTREFRYRKRLEDERHKLIEKAM 167
                 78**99865.5556689***********************************88877.***************************************** PP

      SF1-HH 101 kiipsfkpPadYk 113
                 k+ip+++pP+dY+
  KHJ34772.1 168 KVIPNYHPPQDYR 180
                 ************7 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   3.6     8e-09     2e-05       2      18 .]     309     325 ..     308     325 .. 0.94
   2 !   23.4   1.0   1.6e-08   4.1e-05       2      17 ..     334     349 ..     333     350 .. 0.92

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 8e-09
                 CTSSSSSSSSTTTTSTS CS
     zf-CCHC   2 kCynCGepGHiardCpk 18 
                 +C nCG++GH++ dCp+
  KHJ34772.1 309 ACQNCGQIGHRKYDCPE 325
                 7***************6 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 1.6e-08
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                  C+ CG+ GH+ardC+
  KHJ34772.1 334 ICRICGNAGHMARDCS 349
                 6**************6 PP

>> KH_1  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.1     8e-11     2e-07       9      65 ..     200     271 ..     186     272 .. 0.80

  Alignments for each domain:
  == domain 1  score: 30.7 bits;  conditional E-value: 8e-11
                 GHHHHHHTGGGHHHHHHHHHHT-EEEEES.STT................T.-EEEEEE.SHHHHHHHHHHHH CS
        KH_1   9 slvgriIGkgGsnIkeIreetgakIkvpk.sedeg.............sderevtisG.speavekAkelie 65 
                 +++g++IG++G+++k+++ e+gakI + + ++  +             +++  + i   ++++v+kAk li+
  KHJ34772.1 200 NFIGLLIGPRGNTLKKMETESGAKIAIRGkGSVKEgkgrsdaahtsnqEEDLHCLIMAdTEDKVNKAKTLIH 271
                 35************************9843333336899999***988888888889999999*****9996 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   2.9   5.5e-07    0.0014       3      25 ..     306     326 ..     304     331 .. 0.84
   2 !    9.1   0.1    0.0005       1.3       2      21 ..     330     349 ..     329     359 .. 0.86

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 5.5e-07
   zf-CCHC_3   3 asaaCQkClkkGHwtYECknage 25 
                 +++aCQ+C++ GH  Y C+  ++
  KHJ34772.1 306 ENQACQNCGQIGHRKYDCP--EQ 326
                 689***************9..33 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0005
   zf-CCHC_3   2 nasaaCQkClkkGHwtYECk 21 
                 +a++ C  C+  GH++  C 
  KHJ34772.1 330 TANIICRICGNAGHMARDCS 349
                 5899************9997 PP

>> zf-CCHC_4  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.4   0.00017      0.44      33      48 ..     309     324 ..     307     325 .. 0.90
   2 !    9.2   0.9   0.00037      0.95      32      48 ..     333     349 ..     331     350 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00017
   zf-CCHC_4  33 fCyiCgvlGHsdkrCd 48 
                 +C +Cg +GH   +C+
  KHJ34772.1 309 ACQNCGQIGHRKYDCP 324
                 7**********99997 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00037
   zf-CCHC_4  32 sfCyiCgvlGHsdkrCd 48 
                 ++C iCg  GH +++C+
  KHJ34772.1 333 IICRICGNAGHMARDCS 349
                 79**************7 PP

>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.7   0.00024      0.61       4      20 ..     310     324 ..     309     331 .. 0.85
   2 ?    5.9   1.0    0.0045        12       4      15 ..     335     346 ..     332     351 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00024
   zf-CCHC_6   4 CknCGAFGHtarSkrCP 20 
                 C+nCG +GH+     CP
  KHJ34772.1 310 CQNCGQIGHRK--YDCP 324
                 *********98..7787 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.0045
   zf-CCHC_6   4 CknCGAFGHtar 15 
                 C+ CG  GH+ar
  KHJ34772.1 335 CRICGNAGHMAR 346
                 ***********7 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   2.9      0.11   2.9e+02       6      21 .]     310     325 ..     309     325 .. 0.91
   2 ?   11.5   1.8     8e-05      0.21       5      19 ..     334     348 ..     334     348 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.11
   zf-CCHC_2   6 ChiCgkkGHyIqdCPt 21 
                 C  Cg+ GH   dCP+
  KHJ34772.1 310 CQNCGQIGHRKYDCPE 325
                 999******9999996 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 8e-05
   zf-CCHC_2   5 vChiCgkkGHyIqdC 19 
                 +C+iCg+ GH  +dC
  KHJ34772.1 334 ICRICGNAGHMARDC 348
                 8*********88888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       669  (0.0373138); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4047.57
//
Query:       KHJ34773.1  [L=426]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       914  (0.0509789); expected 358.6 (0.02)
Passed bias filter:                      578  (0.0322383); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3040.21
//
Query:       KHJ34774.1  [L=648]
Description: hypothetical protein EV44_g5768 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      3e-28   99.3   8.5      3e-28   99.3   8.5    2.5  3  Ima1_N          Ima1 N-terminal domain
  ------ inclusion threshold ------
      0.045   13.4   0.1      0.095   12.3   0.1    1.6  1  Wzy_C           O-Antigen ligase
       0.26   11.3   0.1       0.26   11.3   0.1    2.3  2  CpXC            CpXC protein
          1    9.1   4.8        3.3    7.5   2.2    2.5  2  zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal


Domain annotation for each model (and alignments):
>> Ima1_N  Ima1 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.3   8.5   6.8e-32     3e-28       2     135 .]      11     140 ..      10     140 .. 0.87
   2 ?   -0.9   0.4      0.64   2.9e+03      65      91 ..     404     436 ..     323     471 .. 0.57
   3 ?   -2.9   0.1       2.6   1.2e+04      76      78 ..     553     555 ..     514     587 .. 0.50

  Alignments for each domain:
  == domain 1  score: 99.3 bits;  conditional E-value: 6.8e-32
      Ima1_N   2 nCffCnkkskvkyeekns.feCpsCeayNgfdedGdindeipeqeeeslneaakkaaaskskskseeaessssssllCskClknqelkvsklaeylpke 99 
                  C++C  ks+   +++   ++C++C+a N++de+Gdi+d  p+++ e+++++a ++a++ +++    a+s s+s+++C+ Clknq+l++s+la+y  + 
  KHJ34774.1  11 YCHYCDCKSHLIFDGTVFqWDCSNCDASNYLDENGDITD--PPVAPENSTPSAIRYATTYHSEP---ASSISDSNIFCALCLKNQHLFTSSLAQYYVDI 104
                 6**********99999877********************..99998888855555544444444...58999***********************8855 PP

      Ima1_N 100 deddpeyeekeealeeykkeleerYpqlCesCepkv 135
                 ++++ e++++ ++++ +++ele+rYpq+Ce+Cep+v
  KHJ34774.1 105 NNNQLEQKNEDSDYHIFRQELERRYPQVCEKCEPAV 140
                 7777787888888********************987 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.64
      Ima1_N  65 s......eeaessssssllCskClknqelkvsk 91 
                 +      ++  +s++   + +k +++ +l + k
  KHJ34774.1 404 NpqlsgmRHGYQSNNIPSFGKKTNDRMSLSTLK 436
                 022222233333344444444444444444444 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 2.6
      Ima1_N  76 llC 78 
                   C
  KHJ34774.1 553 GKC 555
                 222 PP

>> Wzy_C  O-Antigen ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   2.1e-05     0.095       9      72 ..     228     301 ..     222     433 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.1e-05
       Wzy_C   9 alflstsRsgiigllvalivlliifykrri..........pfllllgilvgvilliilfvlstnletlknitka 72 
                 +++++tsR+     l+  i+ +++f+k++             + + ++  ++i+l i+f    +le + ++t+ 
  KHJ34774.1 228 IFMVTTSRTWAFRTLLCSILSIWWFPKPKNckkdftkritGIKTWYFLQFLTICLRIFFHYVISLEVFFSNTNS 301
                 5899*****99999**************************8888888888888888888866666666665543 PP

>> CpXC  CpXC protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   5.8e-05      0.26      29      57 ..      21      49 ..      15      53 .. 0.85
   2 ?   -1.7   0.6      0.64   2.9e+03      27      63 ..      73     109 ..      60     162 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.8e-05
        CpXC 29 klldgslfeatCpkCgatakleapllyhd 57
                 ++dg++f++ C +C+a+++l+ +  ++d
  KHJ34774.1 21 LIFDGTVFQWDCSNCDASNYLDENGDITD 49
                699****************9998765555 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.64
        CpXC  27 keklldgslfeatCpkCgatakleapllyhdpekell 63 
                 + ++ d ++f a C k ++ ++ +    y+d ++++l
  KHJ34774.1  73 ASSISDSNIFCALCLKNQHLFTSSLAQYYVDINNNQL 109
                 5566666666666666666666666666666555544 PP

>> zinc_ribbon_10  Predicted integral membrane zinc-ribbon metal-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   2.2   0.00074       3.3      18      54 .]       5      39 ..       2      39 .. 0.91
   2 ?    1.2   0.0     0.069   3.1e+02      17      29 ..     125     137 ..     117     139 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00074
  zinc_ribbon_10 18 knryalICskChshnGlapkeeleevkyrCpkCgaln 54
                    ++r++l C  C  ++ l    + + +++ C++C a n
      KHJ34774.1  5 STRKKLYCHYCDCKSHLI--FDGTVFQWDCSNCDASN 39
                    689***************..999999*******9876 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.069
  zinc_ribbon_10  17 aknryalICskCh 29 
                      + ry+ +C+kC 
      KHJ34774.1 125 LERRYPQVCEKCE 137
                     67899*******6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (648 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       940  (0.052429); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 4413.20
//
Query:       KHJ34775.1  [L=423]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-05   25.2   0.0      2e-05   24.4   0.0    1.4  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   1.1e-09     2e-05      55     118 ..     282     339 ..     273     340 .. 0.85

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 1.1e-09
  Exo_endo_phos_2  55 argeeLiefleehslsllnllksgptfkssngsstiDltltsdnlalskleleeedlgSDHrpi 118
                       +gee++++ +e++l++l   +s+ +       +t+Dl +t+ + a   +  +ee ++SDH+pi
       KHJ34775.1 282 GQGEEIEKWAKENNLTCLIIGESTHRA-----GNTLDLAWTNVKEAMA-WVATEECMTSDHLPI 339
                      789*************88776644444.....689*************.99999********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (423 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       770  (0.0429472); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 3209.81
//
Query:       KHJ34776.1  [L=529]
Description: putative sugar transporter (major facilitator superfamily) mfs glucose transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.9e-110  368.2  22.6   7.1e-110  368.0  22.6    1.0  1  Sugar_tr  Sugar (and other) transporter
    4.2e-26   91.7  30.6    1.7e-24   86.5  22.4    2.4  2  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  368.0  22.6  7.9e-114  7.1e-110       2     452 .]      11     482 ..      10     482 .. 0.92

  Alignments for each domain:
  == domain 1  score: 368.0 bits;  conditional E-value: 7.9e-114
                 HHHHHHHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH........HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH- CS
    Sugar_tr   2 alvaalggllfgYdtgvigafltllkfaknfglsksksskee.....ssvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaa 95 
                 a v ++gg lfg+d+  ++a++   +++  f++  ++ +k+        + +g iv+++  G+ +G+l++g+++d++GRkk++  +a+l +ig ++   
  KHJ34776.1  11 AAVSVVGGALFGFDISSMSAIIFTRAYLCYFNQGPETLEKNGacsgpHPSVQGGIVAAMPGGSWLGALMSGIVSDYLGRKKAIQLGAILWCIGCMIVCG 109
                 67889******************99998888877777666657999988999*****************************************999999 PP

                 TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS--- CS
    Sugar_tr  96 akgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllflPES 194
                 a+   ++ +livgR++ Gi+vGl+s+ vP+yisEiAp+ +Rg+lv ++q+ait+Gil+ + + +g + +++++ +ri+ glq++pa++l+i++lflPES
  KHJ34776.1 110 AQ---NISMLIVGRIINGISVGLCSAQVPVYISEIAPPFKRGRLVACQQWAITWGILIMYYIAYGCSFINGTSAFRIPWGLQMMPAIFLFIGMLFLPES 205
                 99...9********************************************************************************************* PP

                 HHHHHHTT-HHHHHHHHHH.....HHHCHHHHHHHHHHHHHHHHHHH.....HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-TH CS
    Sugar_tr 195 Prylvekgkeeeakevlak.....lrgeedadrelaeekdsleaeqeeekaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsk 288
                 Pr+l ++++ eea+evl       + ++e +  e++e+ +  e e+ +e++s+  ll+  ++  r+ igv +qi+ qltG+n++myy ++if  +gl  
  KHJ34776.1 206 PRWLAKNNRWEEATEVLILvhspgVPNSEFVASEIKEIREVVEFEKLNENVSYLDLLRP-DMINRTHIGVFCQIWSQLTGMNVMMYYITYIFTMAGLGS 303
                 *****************99544444445889999999999999998888*******999.899**********************************99 PP

                 H.HHHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS...................CHHHHHHHHHHHHHHHTTTTHH CS
    Sugar_tr 289 s.llvtiivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilgivalllvaks................kaasivaivfialfialfalgwgpv 370
                   ll + i  ++n+v+t+ a++ vd++GRR++ll+Ga+ m+  ++i + + l++  ++                 a + ++i++++lf+a++a++wgpv
  KHJ34776.1 304 NvLLSSSIQFIINVVMTVPALLYVDKWGRRPTLLIGAFLMMSILFINS-CLLAIYGRKpypgefsnasesisisGAPAKGVIACTYLFVAVYAPTWGPV 401
                 98999*******************************999988888887.3333322223577778899888876566789******************* PP

                 HHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGGT CS
    Sugar_tr 371 pwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrtleeieelf 452
                  w++ sE++p+++Rska a+++ +nw +nf+ +++ p ++e+i  + v+l+f+++++l++i v++ +pet  ++lee++++f
  KHJ34776.1 402 SWIYPSEIYPLRLRSKAVAVSTSANWAFNFALAYFVPPAFENIR-WRVYLLFGIFCALMFIHVYLLFPETSQKSLEEVDAIF 482
                 ********************************************.*********************************9987 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.5  22.4   1.8e-28   1.7e-24      28     343 ..      56     424 ..       7     426 .. 0.74
   2 !   10.7   2.9     2e-05      0.18     108     179 ..     404     474 ..     389     499 .. 0.81

  Alignments for each domain:
  == domain 1  score: 86.5 bits;  conditional E-value: 1.8e-28
       MFS_1  28 gispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllfasslwlllvlrvlqGlgagalfpagaaliadwfpkeergraigl 125
                 g  ps++g ++++   g+++++l  G +sd +Gr++ + lg++l+++g ++++  a+++ +l+v+r++ G+  g+  + + ++i++++p+ +rgr +++
  KHJ34776.1  56 GPHPSVQGGIVAAMPGGSWLGALMSGIVSDYLGRKKAIQLGAILWCIGcMIVCG-AQNISMLIVGRIINGISVGLCSAQVPVYISEIAPPFKRGRLVAC 153
                 3778889999999999********************************333333.39999*************************************** PP

       MFS_1 126 lsagfslGailgpllggllasslg...Wravfyilaivsllafvlfllllpeepperkrkspkeee....................kgtgpaplvpawk 201
                  + ++  G+++ + ++  ++   g   +r ++ +    ++++f+ ++l+lpe+p+  ++++ +ee                     + ++ +++v+ ++
  KHJ34776.1 154 QQWAITWGILIMYYIAYGCSFINGtsaFRIPWGLQMMPAIFLFI-GMLFLPESPRWLAKNNRWEEAtevlilvhspgvpnsefvasEIKEIREVVE-FE 250
                 *****************999666678999998888888888888.55**********************999999888887777775555555555.44 PP

       MFS_1 202 allkdpvlw................illialllfffgfsglltllplylqevlglsglllaglllallalvgailallagrlsdrlgrrrrlllallll 284
                 +l  +   +                + +++ l+++ +++++ t++++  +  lg +  +l++  +++ +++++++ + a  ++d++grr++ll++ +l+
  KHJ34776.1 251 KLNENVSYLdllrpdminrthigvfCQIWSQLTGMNVMMYYITYIFT--MAGLGSN--VLLS--SSIQFIINVVMTVPALLYVDKWGRRPTLLIGAFLM 343
                 44444433222334422222222223333444443333333333333..5555555..6666..8*************************999999998 PP

       MFS_1 285 llaalglallavt......................ssavllllvlvliGfglgfvfpsllalasdlappeeagtasglfnt 343
                 + ++++   l ++                        + ++++ ++++ + + +  p ++ + s+ +p + + +a+++ ++
  KHJ34776.1 344 MSILFINSCLLAIygrkpypgefsnasesisisgaPAKGVIACTYLFVAVYAPTWGPVSWIYPSEIYPLRLRSKAVAVSTS 424
                 888887777777678888888887776655555444444444466666667777788888888888888888888887765 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 2e-05
       MFS_1 108 aliadwfpkeergraigllsagfslGa.ilgpllggllasslgWravfyilaivsllafvlfllllpeepper 179
                 ++ ++++p + r++a+++ ++++ +   +l++ + +++ +++ Wr v+++++i+++l+f+ ++ll+pe+  ++
  KHJ34776.1 404 IYPSEIYPLRLRSKAVAVSTSANWAFNfALAYFVPPAF-ENIRWR-VYLLFGIFCALMFIHVYLLFPETSQKS 474
                 5668899999******9999987777735555555555.7999*9.9*************9999998876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (529 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       824  (0.0459591); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3690.28
//
Query:       KHJ34777.1  [L=305]
Description: putative cral trio [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.5e-33  114.2   0.0      6e-33  113.8   0.0    1.2  1  CRAL_TRIO    CRAL/TRIO domain
    2.8e-14   53.0   1.2    5.2e-14   52.2   1.2    1.4  1  CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
     0.0019   18.4   0.0     0.0029   17.8   0.0    1.3  1  CRAL_TRIO_2  Divergent CRAL/TRIO domain
     0.0048   17.7   0.2        3.6    8.5   0.0    2.4  2  Vasculin     Vascular protein family Vasculin-like 1
  ------ inclusion threshold ------
      0.028   13.5   0.0      0.039   13.1   0.0    1.1  1  PDCD7        Programmed cell death protein 7


Domain annotation for each model (and alignments):
>> CRAL_TRIO  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.8   0.0   1.7e-36     6e-33       2     159 .]     108     252 ..     107     252 .. 0.95

  Alignments for each domain:
  == domain 1  score: 113.8 bits;  conditional E-value: 1.7e-36
   CRAL_TRIO   2 eileggkvgihgrDkegrpvlylrlgrfdpkklsleelvralvlvlerllkeleedgqvegvtvviDlkglslskmlwkp.isllkkilkilqdnyper 99 
                 +++e+gk ++ g+D+  rp+lyl ++ +++++++  ++ +++v+++er+++++ +  ++e++t+v+D++  + +k+   p i+++k+il+i+q++yper
  KHJ34777.1 108 VENETGKMVLFGYDNYARPCLYLFPKLQNTATSH--QQTELVVYMIERGIDLMCP--GQETLTIVVDFNIDR-KKL---PgIGQAKSILDIIQNHYPER 198
                 5799***************************999..*******************..***********8777.555...55****************** PP

   CRAL_TRIO 100 lgkilivnaPklfkfafklvkpfldektreKikfvspsnteatlekyidpeqlpkelGGt 159
                 lg  +++naP+ ++++fk++ pf+d+ tr+K++f+++      l +++++eql k++ G+
  KHJ34777.1 199 LGMGFVLNAPWAVTAFFKVITPFMDPFTRNKLNFNGD------LINFVPREQLFKQFTGD 252
                 ***********************************66......*************9995 PP

>> CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.2   1.2   1.4e-17   5.2e-14       1      53 [.      31      87 ..      31      88 .. 0.96

  Alignments for each domain:
  == domain 1  score: 52.2 bits;  conditional E-value: 1.4e-17
  CRAL_TRIO_N  1 aydellahlqeseyk.........lteeekfWltredhddaclLRfLRArkwdvekAikrLe 53
                 +y+ ll+ ++++++          lte+e fWltre     clLRfLRA+kw++ +  krL 
   KHJ34777.1 31 KYESLLKLIKSWKEIpsekgnngpLTEDEIFWLTRE-----CLLRFLRATKWNYLESEKRLL 87
                 7999*******9999*********************.....*******************96 PP

>> CRAL_TRIO_2  Divergent CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   8.1e-07    0.0029      18     108 ..     142     232 ..     124     257 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 8.1e-07
  CRAL_TRIO_2  18 dldkllryvlhtladk.ivgke.yvlVyfhtglssenkpslswlkkvystlprrykknlkklyivhpstfvktllktvlsafvsskfrkkvey 108
                  +  +l  y++++  d  + g+e  ++V++ +  ++++ p+++ +k+++++++++y+++l   +++++ + v +++  v ++f+ ++ r+k+ +
   KHJ34777.1 142 QQTELVVYMIERGIDLmCPGQEtLTIVVDFNI-DRKKLPGIGQAKSILDIIQNHYPERLGMGFVLNAPWAVTAFF-KVITPFMDPFTRNKLNF 232
                  44455556666655664444446999999887.889***************************************.88899999999999766 PP

>> Vasculin  Vascular protein family Vasculin-like 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.5   0.0     0.001       3.6      14      38 ..      35      60 ..      30      67 .. 0.84
   2 !    6.8   0.0    0.0033        12       8      22 ..      80      94 ..      77     101 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.001
    Vasculin 14 Llkem.gwqeesendenylplTedEl 38
                Llk +  w+e + + +n  plTedE+
  KHJ34777.1 35 LLKLIkSWKEIPSEKGNNGPLTEDEI 60
                5554437******************6 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0033
    Vasculin  8 LEaEhrLlkemgwqe 22
                LE+E+rLlk + w+ 
  KHJ34777.1 80 LESEKRLLKTLSWRR 94
                9************85 PP

>> PDCD7  Programmed cell death protein 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.1e-05     0.039     150     244 ..      31     120 ..      27     148 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.1e-05
       PDCD7 150 ilrsleklrklrkeaaerkgillekeadeafesklekLrkvlkkrteeyskEEkaLkvmLeeeqeeerkr.erekrkkkekeellekkvesvLFGe 244
                 + +sl kl k  ke+ ++kg   +  +de f  + e L + l++ +  y + Ek+L   L+ + +++  + e++ +   + e+ +    + vLFG 
  KHJ34777.1  31 KYESLLKLIKSWKEIPSEKGNNGPLTEDEIFWLTRECLLRFLRATKWNYLESEKRLLKTLSWRRDFGVDKiEVDSM---SVENET---GKMVLFGY 120
                 568999*******************************************************999988665144444...333311...45789998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (305 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       445  (0.0248201); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2279.86
//
Query:       KHJ34778.1  [L=102]
Description: putative apc13 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-32  112.1   0.2    1.3e-32  111.9   0.2    1.0  1  Apc13p    Apc13p protein


Domain annotation for each model (and alignments):
>> Apc13p  Apc13p protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.9   0.2     7e-37   1.3e-32       1      85 [.       3      86 ..       3      89 .. 0.98

  Alignments for each domain:
  == domain 1  score: 111.9 bits;  conditional E-value: 7e-37
      Apc13p  1 mDsefqyvhldashhailaeewnkdrLppddvavplekldpvrteeeedvvpddeaangnvkesqkekEpaWrdlnleeLesngp 85
                +D +f+y+h  a  ha+l+e+++k++Lp d+++vp ++ +p+++e+e+dvvpd++aa+g+++++qk +EpaW+dl+leeL+++gp
  KHJ34778.1  3 KDTNFTYLHFSAARHADLFEDFCKNKLPDDEILVP-PQHQPINPEDEDDVVPDQHAAFGIQRATQKIREPAWKDLGLEELMRKGP 86
                79*********************************.9999*******************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (102 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       268  (0.0149478); expected 358.6 (0.02)
Passed bias filter:                      248  (0.0138323); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.39
# Mc/sec: 789.11
//
Query:       KHJ34779.1  [L=221]
Description: putative trafficking protein particle complex subunit 5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-42  143.8   0.0    3.5e-42  143.6   0.0    1.1  1  TRAPP     Transport protein particle (TRAPP) component


Domain annotation for each model (and alignments):
>> TRAPP  Transport protein particle (TRAPP) component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.6   0.0   1.9e-46   3.5e-42       1     146 []      48     208 ..      48     208 .. 0.92

  Alignments for each domain:
  == domain 1  score: 143.6 bits;  conditional E-value: 1.9e-46
       TRAPP   1 fafllgelvsylqrdskdveevekrLekmGyrvGlrllelllar....erpretdilevlkfickdlWkllfgkqidnlktn....hrgeyvltdnefp 91 
                 fa+l+ge+v y+q++++ ++++ekrL+  Gy +Gl+ll+lll+r    +++r+++i+ +l+fi+++lW++lf +++d+l+++      +ey+++dne++
  KHJ34779.1  48 FAYLFGEMVGYAQNRVTGIQDLEKRLNIQGYPIGLKLLDLLLYRepsrSQSRPLNIIALLQFITTTLWRHLFSRPADSLEKSsnpeTPDEYMISDNEPV 146
                 89******************************************666444699*****************************65444466********* PP

       TRAPP  92 ltrfvelpke...lsylaflcGiirGaLenlgfpakVtahelps....delrgrttfeikvk 146
                 +++++++pke   l+++af++G+i+G+++++gfpa+Vtah++ +    + ++g+t+f+ik++
  KHJ34779.1 147 VNQYISVPKEmnqLNCAAFVAGMIEGVCDGAGFPARVTAHSVGKgeegELWPGKTVFLIKFQ 208
                 **********87777***************************88888899**********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       256  (0.0142785); expected 358.6 (0.02)
Passed bias filter:                      253  (0.0141112); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1806.68
//
Query:       KHJ34780.1  [L=330]
Description: putative cell morphogenesis protein las1-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-56  190.6   1.8    2.5e-56  190.1   1.8    1.2  1  Las1      Las1-like
  ------ inclusion threshold ------
      0.026   14.3   0.6      0.072   12.9   0.1    1.9  2  PvlArgDC  Pyruvoyl-dependent arginine decarboxylase (PvlArgDC


Domain annotation for each model (and alignments):
>> Las1  Las1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.1   1.8   2.8e-60   2.5e-56       1     152 [.       7     169 ..       7     170 .. 0.98

  Alignments for each domain:
  == domain 1  score: 190.1 bits;  conditional E-value: 2.8e-60
        Las1   1 tpWrdrrellevreqlya.................essseeeerkralarvsawrsrgneklphavestalLleailsdeekklsasssssalraaysa 82 
                 tpWr+++ell+vr+q+y+                 +++ ++e++k+a+arv++w++rgn  +ph++esta L++a l+d +  +    +s  +ra+y+a
  KHJ34780.1   7 TPWRNQAELLKVRSQFYSqhkeeeskstndcedekQKQIDQEQKKEAVARVRLWMQRGN--CPHLIESTAILTSAKLNDLRGGN----ESFCVRAVYAA 99 
                 8********************************9888899*******************..********************998....99********* PP

        Las1  83 alvRfvnglldsaqkkqraasvaavakelglpatlVelRHeatHeelpslaeLreaakkaLewlwenYWk 152
                 a++Rfv+glld +q+k++++s++a+ak++glpat+VelRH+atHeelpsl +L++a++kaL+w+w +YW 
  KHJ34780.1 100 AFSRFVTGLLDCHQDKRHKLSMYALAKTIGLPATFVELRHQATHEELPSLIRLQSATQKALQWIWGYYWV 169
                 *********************************************************************5 PP

>> PvlArgDC  Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.22     2e+03     121     143 ..      43      48 ..      18      99 .. 0.58
   2 ?   12.9   0.1   8.1e-06     0.072      33      51 ..     169     187 ..     167     195 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.22
    PvlArgDC 121 emlattrglleekiietkeieva 143
                 +++++                 +
  KHJ34780.1  43 KQIDQ-----------------E 48 
                 22221.................1 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 8.1e-06
    PvlArgDC  33 fNLvkvSSilPpeaeivsv 51 
                 +NLv++SSilPp++ i s 
  KHJ34780.1 169 VNLVEISSILPPTTAITSH 187
                 7************997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1641  (0.0915277); expected 358.6 (0.02)
Passed bias filter:                      904  (0.0504211); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.29s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 2451.26
//
Query:       KHJ34781.1  [L=203]
Description: hypothetical protein EV44_g4106 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.085   13.4   0.2        0.2   12.2   0.1    1.6  2  DUF4286   Domain of unknown function (DUF4286)
       0.13   11.7   0.3       0.31   10.5   0.1    1.6  2  NMD3      NMD3 family


Domain annotation for each model (and alignments):
>> DUF4286  Domain of unknown function (DUF4286)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.91   8.2e+03      50      62 ..      90     102 ..      71     121 .. 0.48
   2 ?   12.2   0.1   2.2e-05       0.2      11      51 ..     132     171 ..     129     183 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.91
     DUF4286  50 gktysvqyevese 62 
                 g+++ v  +v+s 
  KHJ34781.1  90 GEAVKVISKVKSG 102
                 3344444444443 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 2.2e-05
     DUF4286  11 eveeewleWlkeehipevlatglfskarllrvleeeeeegk 51 
                 + +eew++++k+ h+p +l++   ++ +++++ +++e e++
  KHJ34781.1 132 DKAEEWITYVKN-HVPRMLHSLAREEIQIIEASAKKEVEKI 171
                 5689********.*******999999999999965665554 PP

>> NMD3  NMD3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.1   3.4e-05      0.31     161     228 ..      74     141 ..      53     153 .. 0.69
   2 ?   -1.5   0.0      0.16   1.4e+03     201     222 ..     163     184 ..     157     188 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 3.4e-05
        NMD3 161 ehkrtfelleqlilkhd.ahafiskikevkeGlDfyfgsksaArklve...flksevggkvkeseklvsedk 228
                 +   +  + + li+k     + +  i++vk G+ +   ++++A+kl+e    + s++ggkv ++e+ ++   
  KHJ34781.1  74 H---IHAIKTALIQKLGpEGEAVKVISKVKSGMAIVPVDEKHAEKLLEeseSIISVLGGKVDKAEEWITY-V 141
                 2...3333344444444155566668899*****************762226999***********9998.3 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.16
        NMD3 201 aArklveflksevggkvkesek 222
                  A+k ve+++s v+++++ s++
  KHJ34781.1 163 SAKKEVEKITSLVPTRISWSKN 184
                 6899999999999999988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1501.47
//
Query:       KHJ34782.1  [L=270]
Description: putative 14-3-3 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.2e-107  357.6   7.0   2.6e-107  357.4   7.0    1.1  1  14-3-3    14-3-3 protein
  ------ inclusion threshold ------
      0.034   14.2   0.3      0.094   12.7   0.3    1.7  1  FlaF      Flagellar protein FlaF
      0.048   14.0   1.0        1.7    9.0   0.1    2.4  2  TPR_12    Tetratricopeptide repeat
       0.12   12.5   0.2       0.26   11.4   0.2    1.6  1  DUF4710   Domain of unknown function (DUF4710)
       0.22   12.1   4.0       0.76   10.3   0.1    3.0  3  TPR_19    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> 14-3-3  14-3-3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  357.4   7.0  7.1e-111  2.6e-107       1     222 []       9     231 ..       9     231 .. 0.99

  Alignments for each domain:
  == domain 1  score: 357.4 bits;  conditional E-value: 7.1e-111
                 HHHHHHHCCHHHHHHHHHCHHHHCSS---HCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCTCC.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC CS
      14-3-3   1 laklaeqaeryddmveymkkvvelkeeLskeernlLsvayKnvvgarRaswrvlssieqkeeske.ekkvelikeyrekiekeLkeiceevlelldktl 98 
                 laklaeqaery++mve mk+v+++++eLs+eernlLsvayKnv+garRaswr+++sieqkeesk+ +++v likeyr+kie eL++ice++le+ldk+l
  KHJ34782.1   9 LAKLAEQAERYEEMVENMKQVASEDQELSVEERNLLSVAYKNVIGARRASWRIVTSIEQKEESKGnNSQVGLIKEYRQKIEAELAKICEDILEVLDKHL 107
                 69**************************************************************9888999**************************** PP

                 HCH.-SHHHHHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHTTTGCC-HHHHHHHHHHHHHHHCTT--HHHHHHHHHHHHHCCHCCCC CS
      14-3-3  99 ipkatseeskvfylkmkgDyyRYlaEfaegeekkeaaekakeaYeeAleiakkelqpthpirLglaLNySVflyeilnspekAcelakkafdeaiaeld 197
                 ip+a+s eskvfy+kmkgDy+RYlaEfa g+++ke+a+k+ eaY++A+e+a+++l+pthpirLglaLN+SVf+yei+nsp++Ac+lak+afd+aiaeld
  KHJ34782.1 108 IPSAKSGESKVFYHKMKGDYHRYLAEFAIGDKRKESADKSLEAYKNATEVAQTDLAPTHPIRLGLALNFSVFYYEIMNSPDQACHLAKQAFDDAIAELD 206
                 *999*********************************************************************************************** PP

                 CS.TTTHHHHHHHHHHHHHHHHHHC CS
      14-3-3 198 elseesykdstlilqlLrdnltlWt 222
                 +lseesykdstli+qlLrdnltlWt
  KHJ34782.1 207 TLSEESYKDSTLIMQLLRDNLTLWT 231
                 ************************8 PP

>> FlaF  Flagellar protein FlaF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.3   2.6e-05     0.094       5      67 ..     180     242 ..     177     248 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.6e-05
        FlaF   5 YaeaaestasprelEaealtraaakLkaaeeagkeseeelaeAlkfnrrlWtilaedlaspen 67 
                 Y e+++s +++ +l ++a++ a+a+L + +e++ ++++ +++ l++n  lWt   ++   pe+
  KHJ34782.1 180 YYEIMNSPDQACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSSEAETNAPEQ 242
                 88999999***********************9999987777***********87777777665 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.1     0.027        97       9      50 ..       9      50 ..       4      51 .. 0.84
   2 ?    9.0   0.1   0.00048       1.7      16      72 ..     141     198 ..     131     203 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.027
      TPR_12  9 laavlrrlgrydeAlellekaleiarrllGpdhpltattlrn 50
                la +  +++ry+e  e+ +++    ++l  +++ l++ ++ n
  KHJ34782.1  9 LAKLAEQAERYEEMVENMKQVASEDQELSVEERNLLSVAYKN 50
                8999999**********9999999988888888787777766 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.00048
      TPR_12  16 lgrydeAlellekaleiarrllGpdhpltattlrnLgrlyr.algryeeAlelleeal 72 
                  +  d++le ++ a e+a+  l p+hp  +    n +  y+  ++ +++A  l ++a 
  KHJ34782.1 141 KESADKSLEAYKNATEVAQTDLAPTHPIRLGLALNFSVFYYeIMNSPDQACHLAKQAF 198
                 56689**************************999999998636699999988888886 PP

>> DUF4710  Domain of unknown function (DUF4710)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   7.3e-05      0.26       8      57 ..      11      61 ..       4      72 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.3e-05
     DUF4710  8 hfaflperYepLeed.edqkeakeekkkkkkqklKKyrKnvgKalrlswrc 57
                ++a   erYe ++e+ +++ ++ +e +   ++ l    Knv  a r swr 
  KHJ34782.1 11 KLAEQAERYEEMVENmKQVASEDQELSVEERNLLSVAYKNVIGARRASWRI 61
                45556789*******55555566666788999999999***********97 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.31   1.1e+03      29      56 ..       8      34 ..       2      40 .. 0.75
   2 ?    0.6   0.0      0.24   8.4e+02      30      54 ..     130     154 ..     124     159 .. 0.85
   3 ?   10.3   0.1   0.00021      0.76      34      60 ..     191     217 ..     190     223 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.31
      TPR_19 29 llLAeallalgqldeAealLdalpeedp 56
                + LA++  ++ +++e  + ++++  ed+
  KHJ34782.1  8 Y-LAKLAEQAERYEEMVENMKQVASEDQ 34
                4.89999999999987777777777776 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.24
      TPR_19  30 lLAeallalgqldeAealLdalpee 54 
                 +LAe  +  ++ + A + L+a+ ++
  KHJ34782.1 130 YLAEFAIGDKRKESADKSLEAYKNA 154
                 599999999********99998876 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.00021
      TPR_19  34 allalgqldeAealLdalpeedpddar 60 
                 ++la   +d+A+a Ld+l ee  +d+ 
  KHJ34782.1 191 CHLAKQAFDDAIAELDTLSEESYKDST 217
                 999******************999864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1207  (0.0673211); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 1982.31
//
Query:       KHJ34783.1  [L=617]
Description: putative tyrosine-protein phosphatase cdc14 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.8e-41  139.7   0.0    9.7e-39  133.0   0.0    2.7  2  DSPn             Dual specificity protein phosphatase, N-term
    7.5e-17   61.4   0.0    1.6e-16   60.3   0.0    1.5  1  DSPc             Dual specificity phosphatase, catalytic doma
    5.1e-05   23.0   0.0    0.00011   21.9   0.0    1.4  1  Y_phosphatase    Protein-tyrosine phosphatase
  ------ inclusion threshold ------
      0.018   15.1   0.0      0.045   13.9   0.0    1.6  2  PTPlike_phytase  Inositol hexakisphosphate
       0.18   11.8   0.0       0.32   10.9   0.0    1.3  1  Y_phosphatase3   Tyrosine phosphatase family


Domain annotation for each model (and alignments):
>> DSPn  Dual specificity protein phosphatase, N-terminal half
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.0   0.0   2.7e-42   9.7e-39       1     141 []      12     184 ..      12     184 .. 0.88
   2 ?    3.6   0.0     0.024        84      81     107 ..     337     363 ..     299     370 .. 0.72

  Alignments for each domain:
  == domain 1  score: 133.0 bits;  conditional E-value: 2.7e-42
        DSPn   1 eiikdrLyfatlkkkpketen..................................vhyfsiddelvYenFyaDFGPlnlaqlyrfcvkvnkkLkskels 65 
                 e+i++rLy+a+++++p+ + +                                   +yf+idd+l Y+ F++DFGPl++++lyrf+v+ +++L ++e++
  KHJ34783.1  12 EFIPNRLYLASYSSPPSVD-TlfpypesmnsrrspskkssraadgtpirsswkriPCYFTIDDSLPYNAFHHDFGPLHIGHLYRFAVQFHDILAAPENR 109
                 6889999999866533221.1234444555666777777788889999999999899****************************************** PP

        DSPn  66 kkkivhytsadekkranaafLigaYavivlklspeealkplasqekppllpFrDaslgectyeltlldclkglekA 141
                 ++ +v+ ++a+ ++ranaa+++++Y+v+++++ p+ al+p+++  +pp++pFrDa++++++ye+t++d+++g+++A
  KHJ34783.1 110 DRPVVFWSKANARSRANAACILASYMVLIQSWAPHLALAPITQV-DPPFMPFRDAGYSQADYEITVQDVVYGVWRA 184
                 *******************************************5.9****************************98 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.024
        DSPn  81 anaafLigaYavivlklspeealkpla 107
                  ++ +LigaY++   +++++e+++ ++
  KHJ34783.1 337 GRTGCLIGAYLIYRYGFTANEIIAYMR 363
                 46779****************998775 PP

>> DSPc  Dual specificity phosphatase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.3   0.0   4.5e-20   1.6e-16      25     127 ..     271     378 ..     250     382 .. 0.80

  Alignments for each domain:
  == domain 1  score: 60.3 bits;  conditional E-value: 4.5e-20
                 ESSSSSEC.ECCTTTTSEEEEEC.CESSTTSCCGGGHHHHHHHHHHH....HHTT-EEEEEESSSSSHHHHHHHHHHHHHHTSCHHHHHHHHHHHSTT- CS
        DSPc  25 vtkevpna.nalkkseieklrip.vedehetkiskyleeavefidka....kqkgkkvlVHCqaGisRSatliiaYlmktknlslneayeflkerrpai 117
                 +   v+ +  +++ s ++ l i  ++   ++ +++ l+ + +fi+ a    ++k+k v+VHC+aG+ R+++li aYl++++++++ne + +++  rp +
  KHJ34783.1 271 IGLVVRLNsELYSSSYFTALGIDhLDMIFDDGTCPPLKTVRKFISLAhdmiTTKKKGVAVHCKAGLGRTGCLIGAYLIYRYGFTANEIIAYMRFIRPGM 369
                 4444443335677888899999945559999*************977677799*******************************************999 PP

                 SSTHHHHHHH CS
        DSPc 118 spnagfirqL 127
                 +    ++++L
  KHJ34783.1 370 VVG-PQQHWL 378
                 887.555555 PP

>> Y_phosphatase  Protein-tyrosine phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0     3e-08   0.00011     150     222 ..     308     372 ..     298     380 .. 0.70

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 3e-08
                    SCCHHHHHHHHHHHHHHSTTSS-EEEECSSSSHHHHHHHHHHHHHHHHHHHSEEEHHHHHHHHHTTSTTSS-S CS
  Y_phosphatase 150 esaksllklirkvekskeaksgpvvVhCsaGvgRtgtfvaldillqqleaeeevdvlqivkelrkqRpgmvqt 222
                    ++ +++++l +++ +    k++ v VhC+aG gRtg+++ + ++++       +   +i+  +r  Rpgmv  
     KHJ34783.1 308 KTVRKFISLAHDMITT---KKKGVAVHCKAGLGRTGCLIGAYLIYRYG-----FTANEIIAYMRFIRPGMVVG 372
                    4445555555555555...59******************998776543.....33566777777777777765 PP

>> PTPlike_phytase  Inositol hexakisphosphate
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.3e-05     0.045      83     147 ..     275     341 ..     245     349 .. 0.85
   2 ?   -3.9   0.0       3.8   1.4e+04      29      44 ..     537     552 ..     527     582 .. 0.60

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.3e-05
                      .....EE-HHHHHHHTT-EEEEEEE-TTS---HHHHHHHHHHHHTS.-T.T-EEEEE-SSSSHHHHH CS
  PTPlike_phytase  83 vetpeevyerelaeelslrYaRipitdekapeeedfdalvsilkea.pe.ktalvfnCqmGrgRTTt 147
                      v+ ++e+y++  ++ l+++   + + d ++p  +++ +++s+  ++  + k+ + ++C++G gRT  
       KHJ34783.1 275 VRLNSELYSSSYFTALGIDHLDMIFDDGTCPPLKTVRKFISLAHDMiTTkKKGVAVHCKAGLGRTGC 341
                      4478899**************************************96335999***********964 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 3.8
                      --.HHHHHHHHHHHHH CS
  PTPlike_phytase  29 keytgisaeeleklea 44 
                      + yt+i +++  ++e+
       KHJ34783.1 537 TIYTSIHNDSCNDIEN 552
                      3456665555555553 PP

>> Y_phosphatase3  Tyrosine phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   8.9e-05      0.32     110     147 ..     313     353 ..     278     361 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 8.9e-05
  Y_phosphatase3 110 yrkvfealad.ee.pvlfHCtaGKDRTGvla.alllsllGv 147
                     +  + +++++ ++  v +HC aG  RTG l+ a l    G 
      KHJ34783.1 313 FISLAHDMITtKKkGVAVHCKAGLGRTGCLIgAYLIYRYGF 353
                     4455555666444799************8652344444555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (617 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.24s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4335.91
//
Query:       KHJ34784.1  [L=290]
Description: putative rna binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-18   65.9   0.0    3.7e-18   65.1   0.0    1.4  1  RRM_1            RNA recognition motif. (a.k.a. RRM, RBD, or 
    1.2e-06   29.0   2.4    1.2e-06   29.0   2.4    2.6  3  FoP_duplication  C-terminal duplication domain of Friend of P


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.1   0.0   4.1e-22   3.7e-18       1      70 []      85     154 ..      85     154 .. 0.97

  Alignments for each domain:
  == domain 1  score: 65.1 bits;  conditional E-value: 4.1e-22
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 l V+nL++d+te++L +lF+ +Gp+k+++l +d+ g+s g+a+V++e++  A++A+++++g + +g++++
  KHJ34784.1  85 LRVENLHYDLTEDDLDDLFNRIGPVKELSLTYDRAGRSEGIAYVTYEQSHHAKRAIQEYDGANAKGQPIR 154
                 679************************************************************9999885 PP

>> FoP_duplication  C-terminal duplication domain of Friend of PRMT1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.5       0.5   4.5e+03      11      21 ..      15      25 ..       8      47 .. 0.49
   2 ?   -1.8   0.1      0.53   4.7e+03      43      53 ..      90     100 ..      56     101 .. 0.44
   3 !   29.0   2.4   1.3e-10   1.2e-06      11      62 ..     217     277 ..     200     288 .. 0.59

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.5
  FoP_duplication 11 gggrggrrgrg 21
                     g++ +grr+  
       KHJ34784.1 15 GNRFQGRRSDH 25
                     22222222222 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.53
  FoP_duplication  43 kkkpltkeeLD 53 
                          lt+++LD
       KHJ34784.1  90 LHYDLTEDDLD 100
                      44456777776 PP

  == domain 3  score: 29.0 bits;  conditional E-value: 1.3e-10
  FoP_duplication  11 gggrggrrgrgrggrggrggrgrgrggrggrkkkkpltkeeLDaeLDaYmg..........k 62 
                      +++ + r +r  ++ g+r + +rg  + + ++ ++++t+eeLDae+D+Y+           +
       KHJ34784.1 217 RSSSPQRYRRESRRIGDRNSINRGVERIA-KDGRPKKTQEELDAEMDDYWNnkdsnnsislN 277
                      22222222333333333333333333333.588*****************966555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      312  (0.017402); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.20s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2268.88
//
Query:       KHJ34785.1  [L=1341]
Description: putative abc transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.2e-47  159.6   0.1    1.4e-28  100.1   0.0    2.4  2  ABC_tran      ABC transporter
    3.1e-35  122.2  38.3    4.3e-19   69.2  18.0    3.3  3  ABC_membrane  ABC transporter transmembrane region
    7.2e-16   58.3   1.5    4.1e-07   29.7   0.2    4.2  2  SMC_N         RecF/RecN/SMC N terminal domain
      2e-07   31.7   0.6     0.0042   17.6   0.0    2.5  2  AAA_23        AAA domain
    2.7e-06   27.0   3.1      0.003   17.3   0.9    2.7  2  AAA_29        P-loop containing region of AAA domain
    8.2e-06   25.8   7.4       0.99    9.1   0.1    5.1  5  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
    3.9e-05   23.6   1.2       0.14   12.0   0.0    2.8  3  RsgA_GTPase   RsgA GTPase
    7.8e-05   22.7   0.1      0.052   13.6   0.0    2.8  2  MMR_HSR1      50S ribosome-binding GTPase
    9.7e-05   22.7   3.7       0.33   11.2   1.0    3.2  2  AAA_22        AAA domain
     0.0025   17.4   2.1      0.051   13.1   1.3    2.3  2  AAA_25        AAA domain
     0.0041   17.5   0.5       0.55   10.6   0.4    2.9  2  AAA_16        AAA ATPase domain
     0.0048   16.0   1.6      0.052   12.6   1.1    2.3  2  T2SSE         Type II/IV secretion system protein
  ------ inclusion threshold ------
      0.016   15.4   0.4         12    6.1   0.4    3.3  2  AAA_33        AAA domain
      0.022   14.3   3.7        5.7    6.5   0.0    3.3  3  cobW          CobW/HypB/UreG, nucleotide-binding domain
      0.024   13.8   0.0        3.8    6.6   0.0    2.9  2  NB-ARC        NB-ARC domain
      0.042   12.6   1.0      0.075   11.8   0.0    1.8  2  Adeno_IVa2    Adenovirus IVa2 protein
      0.056   12.7   0.3        6.3    6.0   0.0    2.4  2  Zeta_toxin    Zeta toxin
      0.067   13.2   1.4         12    6.0   0.1    3.1  3  Dynamin_N     Dynamin family
       0.11   13.0   0.2         10    6.7   0.0    3.0  3  AAA_18        AAA domain
       0.12   11.7   1.6       0.14   11.5   0.1    1.8  2  Mg_chelatase  Magnesium chelatase, subunit ChlI
       0.44   10.4   9.5        4.7    7.1   0.1    3.8  3  NACHT         NACHT domain
        1.3    8.9   2.8        7.7    6.4   0.2    3.0  3  NTPase_1      NTPase


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.2   0.0     3e-18   2.4e-15       1     136 [.     533     667 ..     533     668 .. 0.88
   2 !  100.1   0.0   1.8e-31   1.4e-28       1     137 []    1136    1281 ..    1136    1281 .. 0.91

  Alignments for each domain:
  == domain 1  score: 57.2 bits;  conditional E-value: 3e-18
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH......HHHTCHHHHHHHST CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren......esdeeiekalsklg 93 
                 l+n++lk+++g    i G+ GaGKS Ll +l+g+l++  Ge              ++++ ig++ q p l++ + +ren      +++ + +++l++  
  KHJ34785.1 533 LSNLNLKFQPGI-NMICGKVGAGKSALLLALLGELDQLGGEF------------LRYKQMIGYCGQMPWLQSMS-IRENilfsapYEQIRYKNVLESCA 617
                 689999999995.579*********************99998............5789*************999.********9977777777777777 PP

                 TGG.......TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTT CS
                 xxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  94 lke.......lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpt 136
                 l++        + + v++++  LSgGqk r++lara+ ++++llllD+p 
  KHJ34785.1 618 LTQdlinfkyGDLSMVGENGIGLSGGQKARISLARAIYSRANLLLLDDPL 667
                 77766666655567778888****************************97 PP

  == domain 2  score: 100.1 bits;  conditional E-value: 1.8e-31
                  EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH......HHHTCHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxx RF
    ABC_tran    1 lknvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren......esdeeiekalsk 91  
                  l++vs+++  g+++a++G++G+GKStL+ +l+g l  t+G+i +dg dl +++le+lr++i++l q+p lf+++ ++ n      +s +e+e++++ 
  KHJ34785.1 1136 LSDVSFTIPGGSTTALTGRTGSGKSTLALALLGILPATSGRIIIDGLDLATIDLEILRSRISFLAQDPILFQGT-LKLNldplshHSVDECEAVITA 1231
                  689**********************************************************************9.7777899**9666666666666 PP

                  STTGG....TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                  xxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   92 lglke....lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137 
                  +++++      +t +++ + +LS+Gq+q v lar+ll+++++++lDE+ta
  KHJ34785.1 1232 ISNIQnyswSLQTLIDTAGGNLSQGQRQLVGLARVLLRRSPIVILDEATA 1281
                  6666555567889999999*****************************96 PP

>> ABC_membrane  ABC transporter transmembrane region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.5   1.9e-06    0.0015       3      86 ..     154     235 ..     152     241 .. 0.92
   2 !   45.0   5.5   1.2e-14     1e-11      96     270 ..     300     472 ..     292     476 .. 0.93
   3 !   69.2  18.0   5.3e-22   4.3e-19       8     252 ..     796    1054 ..     789    1071 .. 0.91

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 1.9e-06
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
  ABC_membrane   3 liillailagvlsplfplvlgrildtlldkgdpetealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilr 86 
                   ++ +  ++   +++l p++lg+il+++ + ++ +t  + +y+ll+ll+  +++++++++ ++   + er + ++  +l++k l+
    KHJ34785.1 154 IVSVPGVIELTANFLSPVLLGKILQSIESLSSKRT--TLIYALLMLLVRWISAQSSVFSLWYSRRVYERSRGEMIIMLYEKTLS 235
                   566677888889***********************..********************************************997 PP

  == domain 2  score: 45.0 bits;  conditional E-value: 1.2e-14
                   CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH CS
  ABC_membrane  96 svGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassvaeEslsgirt 192
                   s+G++l+++  d++ +++ ++e+  +++q+l ++++++ ++ +lgw   l+++++++l  +++a++a+il k ++k + a++   +++++ ++ ir 
    KHJ34785.1 300 SSGKILNLMRFDAYEVSQRFWEFPTIITQPLNLLFSIIMIWRLLGWP-CLLGVITVILAQIINALLARILVKWERKRKIATDLKLQYITQFVEVIRH 395
                   79********************************************8.6************************************************ PP

                   HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHH CS
  ABC_membrane 193 VkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvisgelsvgdlvvflslfail 270
                   ++++++++  l+ + +a+++++   i   +++ +++  ++l++ ++ ++a+w +++   ++ l+v+ ++  l+lf+il
    KHJ34785.1 396 LRYYAWQDVWLKSIMDARQYELGLRIITGLWRIFINFLNTLASGFFPVVAFW-AYSVLTRQPLKVNIAFPALQLFSIL 472
                   ************************9999998888888888888888888888.555555789*****99999999987 PP

  == domain 3  score: 69.2 bits;  conditional E-value: 5.3e-22
                    HHHHHHHHHHHHHHHHHHHHHHHSSTCCHH..............HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCST CS
  ABC_membrane    8 ailagvlsplfplvlgrildtlldkgdpet..............ealnvysllllllglaqfilallqsyllnvtgerlskrlrrklfkkilrqp 88  
                    ++l  ++++   ++l+++ + + + +++                 +l  +++ + ll+++q+i+ ++++ ++  +  ++ k+l  k++ k+ ++ 
    KHJ34785.1  796 LALFRLIEIGETWFLKQWSEAYGKLKEQGMiyfenpfkdlpspeINLLPWLIGFSLLTIFQAIFYIISQGIMLTIIYKAGKTLFEKVMVKVTYAK 890 
                    4455667777778888888888776555557777777888889999************************************************* PP

                    HHHHHHSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  ABC_membrane   89 msffdtnsvGellsrltndvsklrdglgeklglffqslltfvgglivmfylgwkltlvllailpliilvsaviakilkklkkkeqkavakassva 183 
                     +f+d ++vG+ll+rlt+d+++++  +++++ ++ + +++ + ++i + ++ + + +  l+++ ++ l++  + +++++l++ e+  + ++ s +
    KHJ34785.1  891 FRFYDITPVGRLLNRLTSDINTVDGNISNQFHDVATLFISWLFSMITIGFITPLFLIFALGLSSVFTLIFLHFLPTSQSLRRLEMVLLTPLISNF 985 
                    *********************************************************************************************** PP

                    HHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
  ABC_membrane  184 eEslsgirtVkafgreeyflekfekaleeakkagikkaianglligitqllgllsyalalwfGttlvis 252 
                      +  g+ t++a+++ ++fl++    +++++k    +  ++++l+ ++++l+ l++++ + f+++l is
    KHJ34785.1  986 GAVTDGLTTIRAYCASSRFLDRVITVTDNFQKMDHFYWSLQSWLMYRFDILSALFTFILTIFAIHLEIS 1054
                    ************************************************************999998765 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.1   3.4e-05     0.027      19     207 ..     537     708 ..     533     720 .. 0.62
   2 !   29.7   0.2     5e-10   4.1e-07     135     212 ..    1243    1324 ..    1137    1329 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 3.4e-05
                 EEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCH..CCCCCC--BTTCSSTTEEEEEEE..EEETTEESSSSSSCEEEEEEEETTSEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  19 ilpfsksftaivGpNGSGKsnlldAilFvLGersakklrse..klsdlihkskekasvkkaeveit..fdnedkklkiekeevsisrrvkrkgeseyki 113
                  l+f++++++i G+ G+GKs ll A+   LGe ++  l  e  +++++i +  + + +++ ++     f+ + ++       +  +  +++   ++  i
  KHJ34785.1 537 NLKFQPGINMICGKVGAGKSALLLAL---LGELDQ--LGGEflRYKQMIGYCGQMPWLQSMSIRENilFSAPYEQ-------IRYKNVLESCALTQDLI 623
                 6899*********************9...775444..44432266778888777777777777543003333333.......33333333333334445 PP

                 TTEEE-HHHHHHHHHCTT-STTCS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHH.HHHHCTTSEEEE.E-SSHHHCCC-SC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx.xxxxxxxxxxxxx RF
       SMC_N 114 ngkevtkkevsellesagiskelLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvael.lkeksknaQfiv.islreemlekadk 207
                 n k     ++s ++ + gi    LSgG+k+ ++la       +++a l llD+  + LD +  + ++++ l +   +  +iv +++r+e+++++ k
  KHJ34785.1 624 NFKYG---DLS-MVGENGIG---LSGGQKARISLA----RAIYSRANLLLLDDPLSSLDYQTAEFIVQRcLASPLLEGRIIVlVTHRTELCSEMAK 708
                 54444...432.34556664...899999866654....445788889999999999998888876664155555555555436888888777755 PP

  == domain 2  score: 29.7 bits;  conditional E-value: 5e-10
                  T........CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEEEEE CS
                  x........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  135 e........lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklvgvt 212 
                  +        +LS G+++Lv la +      +++p+++lDe  a +D +  k++  ll+e  +++ ++v+++r e +++a+ ++++ 
  KHJ34785.1 1243 QtlidtaggNLSQGQRQLVGLARV----LLRRSPIVILDEATASIDTQMAKQIQFLLREWLSQSTILVVAHRPEAVRDANIIIRMA 1324
                  1344455559***********988....489************************************************9999876 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.6   0.0   5.1e-06    0.0042      11      39 ..     534     562 ..     531     566 .. 0.91
   2 !   11.6   0.2   0.00035      0.28      19      42 ..    1146    1169 ..    1134    1202 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.6 bits;  conditional E-value: 5.1e-06
      AAA_23  11 rdqeidFskgltlItGpNGaGKTTildAi 39 
                 ++ ++ F +g++ I+G+ GaGK+++l A+
  KHJ34785.1 534 SNLNLKFQPGINMICGKVGAGKSALLLAL 562
                 578999*******************9886 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00035
      AAA_23   19 kgltlItGpNGaGKTTildAikla 42  
                     t++tG +G+GK+T+  A+  +
  KHJ34785.1 1146 GSTTALTGRTGSGKSTLALALLGI 1169
                  56799************9888655 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0    0.0015       1.2      18      41 ..     539     561 ..     532     564 .. 0.79
   2 !   17.3   0.9   3.7e-06     0.003      17      46 ..    1141    1170 ..    1134    1177 .. 0.75

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.0015
      AAA_29  18 eidlkgatlltGpsGsGKSTllDA 41 
                 +++  g+ ++ G+ G+GKS+ll A
  KHJ34785.1 539 KFQ-PGINMICGKVGAGKSALLLA 561
                 555.3579*************955 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 3.7e-06
      AAA_29   17 ieidlkg.atlltGpsGsGKSTllDAiqalL 46  
                  ++i   g +t ltG++GsGKSTl  A+  +L
  KHJ34785.1 1141 FTIP-GGsTTALTGRTGSGKSTLALALLGIL 1170
                  4554.4579**************77766655 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.6   0.0    0.0017       1.4       1      26 [.     544     563 ..     544     584 .. 0.82
   2 ?    4.6   0.0      0.03        24     238     301 ..     641     702 ..     631     704 .. 0.80
   3 ?   -3.3   0.1       7.7   6.3e+03      56     145 ..     728     763 ..     720     779 .. 0.48
   4 !    9.1   0.1    0.0012      0.99       2      24 ..    1149    1171 ..    1148    1220 .. 0.73
   5 ?    3.7   0.0     0.055        45     236     272 ..    1252    1285 ..    1245    1315 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0017
      AAA_21   1 lnvliGpNgsGKSnLLdaldllarld 26 
                 +n++ G+ g+GKS LL al      +
  KHJ34785.1 544 INMICGKVGAGKSALLLAL------L 563
                 79*****************......3 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.03
      AAA_21 238 SdGtkrllalltallralkkgsllliDEpEngLHPkllrrll.ellkelsrngaQviltTHSpll 301
                 S G+k  + l+ a+++++    lll+D+p ++L+++  + ++ + l +   +g  ++l+TH ++l
  KHJ34785.1 641 SGGQKARISLARAIYSRA---NLLLLDDPLSSLDYQTAEFIVqRCLASPLLEGRIIVLVTHRTEL 702
                 666666667777788888...89************999999977776655567777999997666 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 7.7
      AAA_21  56 ipfefeieeflsqgvryryglrlersqveeklssvetllesgllldkrsleeedvfnpeargirggvsvfslkelsvsepndlqfgkalt 145
                 ++ ef  e++ s +++ + +++l++++                                                       l  +k+l 
  KHJ34785.1 728 SKLEFKNEFLKSAKSNQDLNFNLNEDHS------------------------------------------------------LVPNKFLE 763
                 4444444444444444444444444444......................................................33333333 PP

  == domain 4  score: 9.1 bits;  conditional E-value: 0.0012
      AAA_21    2 nvliGpNgsGKSnLLdaldllar 24  
                  ++l+G+ gsGKS+L  al ++  
  KHJ34785.1 1149 TALTGRTGSGKSTLALALLGILP 1171
                  89****************88854 PP

  == domain 5  score: 3.7 bits;  conditional E-value: 0.055
      AAA_21  236 elSdGtkrllalltallralkkgsllliDEpEngLHP 272 
                  +lS+G+++l +l+  llr+    +++++DE  ++++ 
  KHJ34785.1 1252 NLSQGQRQLVGLARVLLRRS---PIVILDEATASIDT 1285
                  69****************99...*******7777766 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.0   0.0   0.00018      0.14      89     126 ..     532     569 ..     514     578 .. 0.85
   2 ?   -3.0   0.0       7.5   6.1e+03      33      63 ..     677     707 ..     668     745 .. 0.59
   3 !    9.2   0.1    0.0013         1      90     121 ..    1136    1168 ..    1120    1178 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 0.00018
                  THHHHHHHCTTSEEEEECSTTSSHHHHHHHHCTT---- CS
  RsgA_GTPase  89 gleelkellkdktsvlvGqSGvGKStLinallpelelk 126
                   l++l+ +++  + +++G+ G+GKS+L+ all+el++ 
   KHJ34785.1 532 VLSNLNLKFQPGINMICGKVGAGKSALLLALLGELDQL 569
                  567788889999*********************99875 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 7.5
                  HHHHHHHHHHHHTT-EEEEEEE-GGG--HHH CS
  RsgA_GTPase  33 nlldrfLvlaeekgiepvivlnKiDlleeee 63 
                   +++r+L+    +g  +v+v  +++l++e+ 
   KHJ34785.1 677 FIVQRCLASPLLEGRIIVLVTHRTELCSEMA 707
                  5566666666666656666666666666655 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.0013
                   HHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCT CS
  RsgA_GTPase   90 leelkellkd.ktsvlvGqSGvGKStLinallp 121 
                   l++++  + + +t++l G +G GKStL  all+
   KHJ34785.1 1136 LSDVSFTIPGgSTTALTGRTGSGKSTLALALLG 1168
                   5566666666699**************988876 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0     0.015        12       3      22 ..     546     565 ..     545     573 .. 0.88
   2 !   13.6   0.0   6.4e-05     0.052       3     101 ..    1150    1295 ..    1148    1321 .. 0.62

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.015
                 EEEESTTSSHHHHHHHHHTS CS
    MMR_HSR1   3 aivGrpNvGKStLinaltge 22 
                 +i G+  +GKS L+ al+ge
  KHJ34785.1 546 MICGKVGAGKSALLLALLGE 565
                 689**************997 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 6.4e-05
                  EEEESTTSSHHHHHHHHHT.....S.TEEESSSTTSSSSEEEEEEEETTEE...........................................EEE CS
    MMR_HSR1    3 aivGrpNvGKStLinaltg.....e.kaivsdkpgtTrdinegrvklkgke...........................................iel 50  
                  a+ Gr+ +GKStL  al+g     + + i+     +T+d +  r +++                                               +l
  KHJ34785.1 1150 ALTGRTGSGKSTLALALLGilpatSgRIIIDGLDLATIDLEILRSRISF-LaqdpilfqgtlklnldplshhsvdeceavitaisniqnyswslQTL 1245
                  899***************9777652467777777777777766665332.0223466666667777778888888888999999999999988889* PP

                  EECGG..CSSHHHHHHHHHHHHHHHHC...TSEEEEEEETTTTCSHHHHHHHHHHH CS
    MMR_HSR1   51 vDtpG..liegaseekglgkaflalee...adlillvvdaseeklkpldeeleell 101 
                  +Dt+G  l +g+++  gl++ +l+       d +   +d      +++ ++++ ll
  KHJ34785.1 1246 IDTAGgnLSQGQRQLVGLARVLLRRSPiviLDEATASID------TQMAKQIQFLL 1295
                  *****3222233333366666665322111122222222......12223333333 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.1    0.0011      0.93       5      31 ..     542     568 ..     538     584 .. 0.88
   2 !   11.2   1.0   0.00041      0.33       7     114 ..    1148    1297 ..    1144    1315 .. 0.56

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0011
      AAA_22   5 agilvvtGesGtGKTtllrrlleqlde 31 
                  gi +++G +G+GK+ ll  ll +ld+
  KHJ34785.1 542 PGINMICGKVGAGKSALLLALLGELDQ 568
                 68889**************99998875 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00041
      AAA_22    7 ilvvtGesGtGKTtllrrlleqldeeakaee......................erpevv.....fvtlpsst.sskdllrellralglelka..... 70  
                   +++tG +G+GK+tl+  ll  l++ +                          + ++++     + +l  ++  s d ++++  a+ + +++     
  KHJ34785.1 1148 TTALTGRTGSGKSTLALALLGILPATSGRIIidgldlatidleilrsrisflaQ-DPILfqgtlKLNLDPLShHSVDECEAVITAISNIQNYswslq 1243
                  679****************99997654444476677766666666666666642.222224433444444444444445555555555444466666 PP

      AAA_22   71 ........erlsseellealeqalraravielliiDEaqh.lr.s.eealeeL.rs 114 
                          +  + ++ l  l++ l +r   +++i+DEa   ++ + ++++++L r+
  KHJ34785.1 1244 tlidtaggNLSQGQRQLVGLARVLLRR--SPIVILDEATAsIDtQmAKQIQFLlRE 1297
                  555554442222222222333333333..347888888876654356666665444 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.0      0.13   1.1e+02      34      54 ..     543     563 ..     515     579 .. 0.83
   2 !   13.1   1.3   6.3e-05     0.051      30      53 ..    1143    1166 ..    1139    1170 .. 0.92

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.13
      AAA_25  34 elallaGapgtGKttlaldla 54 
                 ++++++G  g+GK++l+l l 
  KHJ34785.1 543 GINMICGKVGAGKSALLLALL 563
                 57899*************986 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 6.3e-05
      AAA_25   30 lpagelallaGapgtGKttlaldl 53  
                  +p g++++l+G++g+GK+tlal l
  KHJ34785.1 1143 IPGGSTTALTGRTGSGKSTLALAL 1166
                  899*******************98 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.0     0.089        73      24      55 ..     542     573 ..     533     599 .. 0.80
   2 !   10.6   0.4   0.00067      0.55      22      89 ..    1145    1209 ..    1130    1307 .. 0.47

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.089
      AAA_16  24 pelvllsGesGvGKsslvrellralekdggif 55 
                 p++ ++ G  G GKs+l+ +ll +l + gg f
  KHJ34785.1 542 PGINMICGKVGAGKSALLLALLGELDQLGGEF 573
                 566788999*********99998887655444 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00067
      AAA_16   22 grpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqllde......a 89  
                  g ++ + l+G  G+GKs+l+ +ll  l ++ g  +    d  +        +++l r + +  l+++      +
  KHJ34785.1 1145 G-GSTTALTGRTGSGKSTLALALLGILPATSGRIIIDGLDLATI------DLEIL-R-SRISFLAQDpilfqgT 1209
                  3.37899****************987777755555444444422......23333.3.4444444443333331 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.26   2.1e+02     131     155 ..     544     568 ..     522     574 .. 0.86
   2 !   12.6   1.1   6.4e-05     0.052     134     162 ..    1151    1179 ..    1143    1181 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.26
       T2SSE 131 lilvsGgTgsGKttllyallkeink 155
                 + ++ G  g GK+ ll all e+++
  KHJ34785.1 544 INMICGKVGAGKSALLLALLGELDQ 568
                 55789****************9976 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 6.4e-05
       T2SSE  134 vsGgTgsGKttllyallkeinksderivt 162 
                  ++G TgsGK+tl+ all ++++++ ri++
  KHJ34785.1 1151 LTGRTGSGKSTLALALLGILPATSGRIII 1179
                  79*********************999985 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.028        23       3      29 ..     546     575 ..     544     615 .. 0.84
   2 ?    6.1   0.4     0.014        12       5     121 ..    1152    1325 ..    1149    1337 .. 0.51

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.028
      AAA_33   3 llvGlpGsGKstlaerllkklg...avlls 29 
                 +++G  G+GKs l+  ll +l+   +++l+
  KHJ34785.1 546 MICGKVGAGKSALLLALLGELDqlgGEFLR 575
                 89************9998777655566665 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.014
      AAA_33    5 vGlpGsGKstlaerllkklg............avllssdtlrrrlfgtdqqskt.........................................dy 48  
                   G  GsGKstla  ll  l+              +++  +lr+r+    q+++                                          d 
  KHJ34785.1 1152 TGRTGSGKSTLALALLGILPatsgriiidgldLATIDLEILRSRISFLAQDPILfqgtlklnldplshhsvdeceavitaisniqnyswslqtliDT 1248
                  6889********9998877766554443333333333333444444433333333333344444444444444444444444444444433333211 PP

      AAA_33   49 tr.vldrlyqilnelarkalsagrnvildatnlsrrer..arflklarrlgvpvri.vvvetdeetlkeRlakRaan 121 
                  +   l++  ++l +lar  l++   vild   +s +++  +++  l+r++ ++ +i vv + +e++  +++  R+an
  KHJ34785.1 1249 AGgNLSQGQRQLVGLARVLLRRSPIVILDEATASIDTQmaKQIQFLLREWLSQSTIlVVAHRPEAVRDANIIIRMAN 1325
                  11233334456667777666666667777777776444333444445555555444355666667766777777666 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.4     0.012        10       3      21 ..     545     563 ..     543     571 .. 0.84
   2 ?    0.9   0.0      0.35   2.9e+02      43      74 ..     700     731 ..     693     739 .. 0.84
   3 ?    6.5   0.0     0.007       5.7       2      48 ..    1148    1194 ..    1147    1250 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.012
                 EEEEESTTCCHHHHHHHHH CS
        cobW   3 tvltGflGsGKTtLlnhll 21 
                  +++G +G+GK++Ll +ll
  KHJ34785.1 545 NMICGKVGAGKSALLLALL 563
                 5799***********9998 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.35
                 CCCCHCCCT.EEEETTTTECCHCTT-HHHHHH CS
        cobW  43 aellretgveivelenGciCctlredllkele 74 
                  el +e +++i+ l+ G+ C   ++dl+ +le
  KHJ34785.1 700 TELCSEMAKQIIFLNSGKACVISKDDLTSKLE 731
                 5666777788****************998876 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.007
                  EEEEEESTTCCHHHHHHHHHCT--SS-EEEEESS-SSCHCCCCCCHC CS
        cobW    2 vtvltGflGsGKTtLlnhllenraglklavivNefgevsiDaellre 48  
                  +t ltG  GsGK+tL  +ll      +  +i+  +    iD e+lr+
  KHJ34785.1 1148 TTALTGRTGSGKSTLALALLGILPATSGRIIIDGLDLATIDLEILRS 1194
                  5889***********99999666666666777766667777777766 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.0    0.0047       3.8      16     148 ..     540     707 ..     528     724 .. 0.66
   2 ?    3.1   0.5     0.057        46      24      37 ..    1150    1163 ..    1143    1170 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0047
                 TTSCSEEEEEEESTTSSHHHHHHHHCCSHCCCCCCBTEEEEE................................EEESXXHHHHHHHXXHHHHHCCCTT CS
      NB-ARC  16 delqslvvalvGmgGvGKttlakqilnksdevegrFdsvawv................................vvsktdkseeiletilkeLslsedd 82 
                  +++  +  + G+ G GK+ l+   l ++d++ g+F ++ ++                                v+      ++++++   +Ls   ++
  KHJ34785.1 540 FQPG--INMICGKVGAGKSALLLALLGELDQLGGEFLRYKQMigycgqmpwlqsmsirenilfsapyeqiryknVLESCALTQDLINFKYGDLSMVGEN 636
                 4555..77899*************************999999899999999999999998866666665533333322333333333333344444333 PP

                 SSSS-STTS........HHHHHHHHCCCTTEEEEEEEE-SHHH......H.....HHHHCHTTSEEEEEESBCCCCCCS- CS
      NB-ARC  83 leekeeves........lkrklvrlLltkrfllvlDDVweeed......wdkigvvlparenrlrvllTTRdeevanavs 148
                                  +   l r++ ++  ll+lDD   + d        + +++ p  e r+ vl+T R e   ++++
  KHJ34785.1 637 --------GiglsggqkARISLARAIYSRANLLLLDDPLSSLDyqtaefIVQRCLASPLLEGRIIVLVTHRTELC-SEMA 707
                 ........0344445447778899999999999999988776622222222224455666777778888886544.4443 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.057
                  EEEESTTSSHHHHH CS
      NB-ARC   24 alvGmgGvGKttla 37  
                  al G+ G+GK+tla
  KHJ34785.1 1150 ALTGRTGSGKSTLA 1163
                  799**********8 PP

>> Adeno_IVa2  Adenovirus IVa2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   9.2e-05     0.075      77     108 ..     532     563 ..     519     566 .. 0.92
   2 ?   -2.5   0.2       2.1   1.7e+03      93     108 ..    1152    1167 ..    1149    1169 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 9.2e-05
  Adeno_IVa2  77 elsslnyglqPviGviyGPtGsGksqllrnli 108
                  ls ln++ qP i +i G  G+Gks ll +l+
  KHJ34785.1 532 VLSNLNLKFQPGINMICGKVGAGKSALLLALL 563
                 5899************************9998 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.1
  Adeno_IVa2   93 yGPtGsGksqllrnli 108 
                   G tGsGks l  +l+
  KHJ34785.1 1152 TGRTGSGKSTLALALL 1167
                  799********98886 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0    0.0077       6.3      15      41 ..     541     567 ..     534     577 .. 0.86
   2 ?    4.3   0.1     0.027        22      21      50 ..    1151    1180 ..    1147    1186 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0077
  Zeta_toxin  15 rPklillgGqpGAGKselaellkdele 41 
                 +P + ++ G  GAGKs+l+ +l  el+
  KHJ34785.1 541 QPGINMICGKVGAGKSALLLALLGELD 567
                 6888999**************999987 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.027
  Zeta_toxin   21 lgGqpGAGKselaellkdelerqgnvvrld 50  
                  l G +G+GKs+la +l   l ++++ + +d
  KHJ34785.1 1151 LTGRTGSGKSTLALALLGILPATSGRIIID 1180
                  789**********99998888777777666 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.1     0.014        12       3      21 ..     547     565 ..     546     567 .. 0.94
   2 ?    4.3   0.1     0.047        38       2      21 ..    1150    1169 ..    1149    1179 .. 0.85
   3 ?   -0.6   0.0       1.4   1.2e+03      91     156 ..    1233    1297 ..    1214    1309 .. 0.67

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.014
                 EEEBTTTTHHHHHHHHHTS CS
   Dynamin_N   3 vvGsqSsGKSSvlnaLlge 21 
                 ++G++ +GKS++l aLlge
  KHJ34785.1 547 ICGKVGAGKSALLLALLGE 565
                 89***************97 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.047
                  EEEEBTTTTHHHHHHHHHTS CS
   Dynamin_N    2 avvGsqSsGKSSvlnaLlge 21  
                  a+ G + sGKS+++ aLlg 
  KHJ34785.1 1150 ALTGRTGSGKSTLALALLGI 1169
                  678***************94 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 1.4
                  EEEEEEETTS-SEEEEE---B-SSSGTTSHHHHHHH.STTEEEEEEEETTS-CCC-CHHHHHHHHST CS
   Dynamin_N   91 illkilsllvkgltlvDlPGldsvnkrdqelvkeyi.kkadiilavtsanhdlsnsealflarevdp 156 
                   +++++s+  +  tl+D+ G + ++ ++q +    +  +++ i+ + +a  ++ ++ a++++ ++++
  KHJ34785.1 1233 SNIQNYSWSLQ--TLIDTAGGNLSQGQRQLVGLARVlLRRSPIVILDEATASIDTQMAKQIQFLLRE 1297
                  55555555555..56*******999999955444444788888888888888888877777766554 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0      0.23   1.8e+02       2      18 ..     546     562 ..     546     592 .. 0.82
   2 ?   -2.3   0.0       7.5   6.1e+03      73      95 ..     689     711 ..     673     726 .. 0.76
   3 ?    6.7   0.0     0.012        10       3      18 ..    1151    1166 ..    1150    1203 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.23
      AAA_18   2 lltGtpGvGKttlakeL 18 
                 +++G+ G+GK+ l  +L
  KHJ34785.1 546 MICGKVGAGKSALLLAL 562
                 69**********98887 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 7.5
      AAA_18  73 egknlvidghlaeleseaakdik 95 
                 eg  +v+  h+ el+se+ak+i 
  KHJ34785.1 689 EGRIIVLVTHRTELCSEMAKQII 711
                 67788888999999998888765 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.012
      AAA_18    3 ltGtpGvGKttlakeL 18  
                  ltG  G+GK+tla +L
  KHJ34785.1 1151 LTGRTGSGKSTLALAL 1166
                  89***********998 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.2       7.4     6e+03      26      43 ..     546     563 ..     546     572 .. 0.76
   2 ?   11.5   0.1   0.00017      0.14      19      52 ..    1143    1176 ..    1134    1194 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 7.4
  Mg_chelatase  26 llvGppGsGKtmlakrlp 43 
                   +++G  G+GK+ l  +l 
    KHJ34785.1 546 MICGKVGAGKSALLLALL 563
                   57899*****99866654 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 0.00017
  Mg_chelatase   19 aaGgHnlllvGppGsGKtmlakrlpsllpplsee 52  
                    + Gg    l+G  GsGK+ la +l ++lp+ s +
    KHJ34785.1 1143 IPGGSTTALTGRTGSGKSTLALALLGILPATSGR 1176
                    568888899********************98765 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1      0.36   2.9e+02       5      24 ..     547     566 ..     544     577 .. 0.84
   2 ?    5.8   0.5     0.015        12       2      20 ..    1148    1166 ..    1147    1172 .. 0.86
   3 ?    7.1   0.1    0.0057       4.7      52     148 ..    1240    1332 ..    1228    1341 .] 0.65

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.36
                 EEC-TTTCHHHHHHHHHHHH CS
       NACHT   5 lqGeaGsGKTtLlqklalaw 24 
                 + G+ G GK++Ll  l  ++
  KHJ34785.1 547 ICGKVGAGKSALLLALLGEL 566
                 78***********8887666 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.015
                  CEEEEC-TTTCHHHHHHHH CS
       NACHT    2 lvilqGeaGsGKTtLlqkl 20  
                  + +l+G+ GsGK+tL+  l
  KHJ34785.1 1148 TTALTGRTGSGKSTLALAL 1166
                  7899***********9655 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0057
                  .-HCHHHCCCCTS--SSS-CCHHHHCCSCCCEE.....EEEE-STT-SS-TCH.........HHHHHCTTTTT--EEEEEEECCCHHHHCTTSSCE. CS
       NACHT   52 rsladllfsqlpepaapvsevwavllelperlL.....lilDglDelvtdlgqkekqpvrtlLselirkkllpeasllltvrpralrdleeqleea. 142 
                   sl++l+   +  +++ +++    l+ l++ lL      ilD +    +  + + +++++ lL+e++++    ++ l+++ rp+a+rd+   ++ a 
  KHJ34785.1 1240 WSLQTLIDTAGGNLSQGQRQ----LVGLARVLLrrspiVILDEA---TASIDTQMAKQIQFLLREWLSQ----STILVVAHRPEAVRDANIIIRMAn 1325
                  56777777777777777777....66666666666665666644...3333333567888888888888....99************9544333333 PP

                  ...EEEE CS
       NACHT  143 .ivleve 148 
                   ++lev+
  KHJ34785.1 1326 gKILEVK 1332
                  3466666 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.56   4.6e+02       3      26 ..     546     569 ..     545     572 .. 0.87
   2 ?    6.4   0.2    0.0094       7.7       3      23 ..    1150    1170 ..    1148    1184 .. 0.84
   3 ?   -1.3   0.1       2.2   1.8e+03      98     156 ..    1273    1332 ..    1256    1340 .. 0.62

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.56
                 EEE--TTSSHHHHHHHHHHHH... CS
    NTPase_1   3 fiTGppGvGKtTlvkkvlellkss 26 
                 +i G+ G GK+ l+  +l +l++ 
  KHJ34785.1 546 MICGKVGAGKSALLLALLGELDQL 569
                 589***********9999998765 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0094
                  EEE--TTSSHHHHHHHHHHHH CS
    NTPase_1    3 fiTGppGvGKtTlvkkvlell 23  
                  ++TG+ G+GK+Tl   +l  l
  KHJ34785.1 1150 ALTGRTGSGKSTLALALLGIL 1170
                  69***********98887766 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 2.2
                  EEEE---.STTGGG-HHHHHHH.HHHHTTTSEEEEE--SS--SHHHHHHHT-TT-EEEE-- CS
    NTPase_1   98 viviDEi.GkmElkskkfkeav.eevLksekpvlavihrrkdlalveeirerkdvkvfevt 156 
                  ++++DE   ++  +++k ++ + +e L s+  +l+v hr++  +  + i + +++k++ev+
  KHJ34785.1 1273 IVILDEAtASIDTQMAKQIQFLlREWL-SQSTILVVAHRPEAVRDANIIIRMANGKILEVK 1332
                  666666413456555555554404445.566688899999855555666666678888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1341 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       827  (0.0461264); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        82  (0.0045736); expected 17.9 (0.001)
Passed Fwd filter:                        23  (0.00128284); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 0.92u 0.31s 00:00:01.23 Elapsed: 00:00:00.45
# Mc/sec: 8988.21
//
Query:       KHJ34786.1  [L=523]
Description: putative cytochrome p450 monooxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-27   94.6   0.0    8.4e-27   94.0   0.0    1.1  1  p450      Cytochrome P450


Domain annotation for each model (and alignments):
>> p450  Cytochrome P450
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.0   0.0   4.7e-31   8.4e-27      81     441 ..     109     488 ..      76     498 .. 0.77

  Alignments for each domain:
  == domain 1  score: 94.0 bits;  conditional E-value: 4.7e-31
                 TTTTSSSTTCGHHHHHHHHHHHHHHHTSHSTTTHHHHHHHHHHHHHHHHHCCCCHCSEEETHHHHHHHHHHHHHHHHHSSHHHTTTSSHHHHHHHHHHH CS
        p450  81 pfkgkgvlfangekwkklRrfltptltsfgklsleelveeeaedlveklrkkagesselditellskaaldvigsilFgarfdlledeklselvkavee 179
                 +++  g + +n   ++  R+ +t++l s+    l+++ ee a  ++++l +  +   + +++ +l+k++  v+g++++g +++  +d+     v+++ +
  KHJ34786.1 109 HSNISGFAIDNKMLTTVVRHDVTRNLASS----LNSVQEETALSFYRTLGPCEDWT-THNLYSVLTKIVALVSGRVFVGTSLS-RNDKWVDVTVNYTLH 201
                 33444444445455555555555555555....67777777777777777777766.799*********************99.777766677777777 PP

                 HHH....HHHCHHHHCCCCCHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCHCHC.SCSSCSHHHHHHHHCTTCTCTSSSSHHHHHHHHHHHHHH CS
        p450 180 lss....llskssvqllllfpllkylptkllrklkeavkklkdlldklieerretldsa.kksrrdfldalllakkekkgesklsdeelaatvlellfa 273
                 l+     +l  + + ++l+ p +k  ++ +++   +a +++k l+d+++ e     + + k +++++++ +l+ +  k ++   + + l++++l+l f 
  KHJ34786.1 202 LNAakhaVLGWPEWVVNLIAPYMK-QFKAIEKFRSRAEEFVKPLHDAYFAEESNGKQASeKGNEKSGVSWFLDRM--KPQD-RKDPKMLVNQLLDLSFV 296
                 766444466667777777777444.45577777777777778888877766655555546789***********9..3333.447799*********** PP

                 HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHCCTTT.........T-HHHHCCT-HHHHHHHHHHHHHSCSSTTEEEEESSSCEEETT.EEE-TT-E CS
        p450 274 GvdTtsstlswaLyeLaknPevqeklreEidevlgdkr.........eptyddlqklpyldavikEtLRlhpvvplllpRevtkdvvirg.ylipkGte 362
                 +++Ttss ++ a++ La++ e+   l  Ei+ v+ +++         ++    ++k   ld ++kE+ R+ p+   +l R++ +dv+++  +++pkG++
  KHJ34786.1 297 AIHTTSSSIAHAIFDLATYREYIPILIDEIKAVIAEDScdtspdgilKIGKPTIAKFIKLDSFLKESIRMNPLFLASLIRKLNTDVKFSSgFTLPKGSH 395
                 **********************************7777799999999888889999999*****************************977******** PP

                 EEEEHHHHHT-TTTSSST......TS--GGGGB-TTS.........CTESSCTT--TTEEGGGS-TTHHHHHHHHHHHHHHHHHHEEEEESTST CS
        p450 363 vivnlyalhrdpevfpnP......eeFdpeRFldekg.........nskrksfaflPFGaGpRnCiGerlArmelklflatlLqnFevelqpet 441
                 + v+ + ++      + P      +eFd  RF + ++            + s  +l FG G ++C+G+ +A  e+k++l+ lL + ++ + +++
  KHJ34786.1 396 IAVPSWVINIQSPTLHSPghtkplNEFDGLRFFKLRQlpgnenrhlLV-STSPDSLIFGHGNHACPGRFFASNEIKIILIELLLKWDFRFLNDV 488
                 *******9854444444433333579******9999999988888533.789999******************************999987655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 4040.90
//
Query:       KHJ34787.1  [L=248]
Description: putative gpi-anchored protein transcription [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.3e-87  292.1   0.0    3.9e-87  291.9   0.0    1.0  1  HRXXH            Putative peptidase family
      2e-06   28.4   0.0    3.4e-06   27.7   0.0    1.4  1  Aspzincin_M35    Lysine-specific metallo-endopeptidase
  ------ inclusion threshold ------
      0.043   12.3   0.0      0.058   11.9   0.0    1.2  1  Glyco_hydro_127  Beta-L-arabinofuranosidase, GH127


Domain annotation for each model (and alignments):
>> HRXXH  Putative peptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  291.9   0.0   6.5e-91   3.9e-87      24     243 ..      28     248 .]       5     248 .] 0.94

  Alignments for each domain:
  == domain 1  score: 291.9 bits;  conditional E-value: 6.5e-91
       HRXXH  24 etessssaetakdvsagavkefpihksCNaterrqlekaleetvelaahardhllrfGnsseiykkyFGdaslaeviGvlekvvsadksdvlfrCddpd 122
                  ++++++  +++d++ag ++ef++h+sCNat+++ql+ +l+++v+la+ha++h+l+ G++s iykkyFG++++ +v+G+++k++s+d++d+lfrCddpd
  KHJ34787.1  28 PSDQNNPFLISYDWKAGFTSEFELHDSCNATQKKQLQDGLSDAVTLARHAKEHILVKGTESPIYKKYFGQGPTGSVLGWYDKIASSDRKDILFRCDDPD 126
                 45667777889**************************************************************************************** PP

       HRXXH 123 gnCaandewaGhwrGenatdetviCdlsyetrkslselCaeGytvaesktntywaiDllHRlfHvpaigegvvehyaeeyeevlelakk.nateavrds 220
                 +nC+++++waGh+rG+na+ etviC+ls+ tr +l++lC+ G + ++ k+n+ w+ Dl+HRl+H+++igegv++hy+    e lela++ n + a+ ++
  KHJ34787.1 127 KNCQTQPQWAGHHRGKNASLETVICELSFLTRLPLEALCSPGMDKVTGKPNKLWGPDLIHRLYHLNKIGEGVIKHYTHGKSEALELASSeNYSLAATNT 225
                 **************************************************************************************9864899****** PP

       HRXXH 221 dtllyyaldvYaadvavpgvGCl 243
                 d+ll +a ++Ya+d+  pgvGCl
  KHJ34787.1 226 DSLLLFANEAYAFDIINPGVGCL 248
                 **********************5 PP

>> Aspzincin_M35  Lysine-specific metallo-endopeptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.0   5.7e-10   3.4e-06       8     145 .]      87     233 ..      83     233 .. 0.82

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 5.7e-10
  Aspzincin_M35   8 dtarfktwFgttdqstrskvaavfskiakeckslnsgsltyscsdvkgsCk.sevlAytv...psslnviylcp.affs.lpeltkkctg...... 91 
                    ++  +k++Fg+  +     v   ++kia+    ++ + + + c+d +++C+ +   A  +   + sl+  ++c+ +f++ lp l++ c+       
     KHJ34787.1  87 ESPIYKKYFGQGPT---GSVLGWYDKIAS----SDRKDILFRCDDPDKNCQtQPQWAGHHrgkNASLE-TVICElSFLTrLP-LEALCSPgmdkvt 173
                    56779999996666...99*********9....79***************985555655547455544.5555548888555.7777877788888 PP

  Aspzincin_M35  92 ...tdsqagtivHEltHftev..agtdDiaygqsaakslaksnp.sqAleNADsyeyFae 145
                       ++ +   ++H l H++++  +  ++++ g s+a +la s++ s A +N Ds  +Fa+
     KHJ34787.1 174 gkpNKLWGPDLIHRLYHLNKIgeGVIKHYTHGKSEALELASSENySLAATNTDSLLLFAN 233
                    8865579999***********8778899************99988*************96 PP

>> Glyco_hydro_127  Beta-L-arabinofuranosidase, GH127
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   9.7e-06     0.058     112     150 ..     175     213 ..     146     225 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 9.7e-06
                      EETTEESH-.---HHHHHHHHHHHHHHHHHH--HHHHHHH CS
  Glyco_hydro_127 112 akkeawapd.shelYnlgkliegavayyqatgkeklldva 150
                      ++++ w pd  h lY l+k+ eg +++y++ gk+++l++a
       KHJ34787.1 175 KPNKLWGPDlIHRLYHLNKIGEGVIKHYTH-GKSEALELA 213
                      6899****88******************86.888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       345  (0.0192426); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1857.73
//
Query:       KHJ34788.1  [L=536]
Description: putative zinc iron transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-43  149.0  21.5    1.8e-43  149.0  21.5    2.5  3  Zip        ZIP Zinc transporter
  ------ inclusion threshold ------
      0.056   14.3  10.9        1.1   10.1   3.0    2.3  2  Chorion_2  Chorion family 2
        3.9    6.8  25.6        4.9    6.5  11.0    2.2  2  SelP_N     Selenoprotein P, N terminal region
        4.8    7.1  17.9       0.24   11.3   4.5    2.2  2  DUF2796    Protein of unknown function (DUF2796)


Domain annotation for each model (and alignments):
>> Zip  ZIP Zinc transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0      0.92   4.1e+03      84     131 ..       9      59 ..       6      80 .. 0.61
   2 ?    1.2   6.7     0.038   1.7e+02     127     177 ..     142     192 ..     124     213 .. 0.53
   3 !  149.0  21.5     4e-47   1.8e-43       2     332 ..     217     532 ..     216     533 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 0.92
         Zip  84 lGflllllveklltmivek...ksshkektpkkasssssesaakksvsndk 131
                 lG+++ +++ + ++ i+     +s+ ++  + +++s  +  +a  s++  k
  KHJ34788.1   9 LGLYISYFLSRRVSAISYPtecHSEGGRVACVNHNSTNAVDKAPVSAPTTK 59 
                 788888888888887766655655555555555555555444444444444 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.038
         Zip 127 vsndkveeseekedhvaeadtdadskeelrngkqeksesekeqaseeedke 177
                  +  +ve   e  ++v+e++ +++s e +r+ k + +++++++  ++++++
  KHJ34788.1 142 PEGTQVEVLAEEASEVPETERKNNSFEGHREIKRHDHGHGHHSHGHSHSHS 192
                 444444444444555555555555555555555555555555433222221 PP

  == domain 3  score: 149.0 bits;  conditional E-value: 4e-47
         Zip   2 llkilaiiaililsllgllgpllvpkiskl.lsklllslllafavGvllgtaflhLlPealealeesqleeehth.plagllvllGflllllveklltm 98 
                  l+i+++++il++s++g++ p+l+    k+ ++  +++++++f+ G++++taf+hLl ++  ++ +++lee  +    a  + ++G++l ++v+ l + 
  KHJ34788.1 217 NLRIGLLFVILATSAVGVFTPILLEAFFKIrTEGMVFTFIKQFGTGIIIATAFIHLLTHGGIMFANPCLEEL-QYeSTATSITMGGLFLAFIVDYLSNR 314
                 5899***********************9999**************************************984.3349********************** PP

         Zip  99 ivekksshkektpkkasssssesaakksvsndkveeseekedhvaeadtdadskeelrngkqeksesekeqaseeedkeklaslkvraiilllglilHs 197
                 +v +                     ++   + +++++e++ + + + + + +   ++ +g+++ +++++ + +++    ++  +++  +il+ g+i+Hs
  KHJ34788.1 315 LVRW---------------------QRMKAMPEITDKEKDAELDLSSQLKSEGIIHHGHGHGHGHGHGHGHHHHSLGLINTNDSSISLLILEAGIIFHS 392
                 ****.....................22223333333444333333333333333333344444444444444456666788889999************ PP

         Zip 198 fidGLAlGvssssstgislfiAvllHelpeelglgaiLlkaglsrkkav...llnllfaltaplGiliGilvrs..isessgaeivsgillalsaGtfl 291
                 + +G+ l   +++s +i+lfi++++H+++e+l+lga+++ a+  +       ll l+f++ +plG++iGi+  +  ++++    iv g +++lsaG+++
  KHJ34788.1 393 LLIGITLV-VAGDSVFITLFIVIIFHQMFEGLALGARIAAANNGEFGNAksiLLPLVFSFITPLGMAIGIGTLQsfNGNDVATIIVLGTFDSLSAGILI 490
                 *******7.8999****************************87654433344*******************5559************************ PP

         Zip 292 YvalvellphEllnek.gssslkqsllqllglllGfalmlll 332
                  v+  ++ + +    + ++ s+ ++ll ++ l++Gfalm ll
  KHJ34788.1 491 WVGIIDMWAGDWIFGDlADASWPKTLLGMASLVAGFALMGLL 532
                 *********99999999889*******************998 PP

>> Chorion_2  Chorion family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   3.0   0.00025       1.1      20      52 ..     170     203 ..     135     217 .. 0.73
   2 ?    8.6   1.0   0.00074       3.3      23      42 ..     347     367 ..     328     383 .. 0.56

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00025
   Chorion_2  20 vkai..ygrgrGnrgYgrsvesgrrygdsspsdse 52 
                  ++i  + +g+G++++g s  s ++++++++ +s+
  KHJ34788.1 170 HREIkrHDHGHGHHSHGHS-HSHSGHSSANGAESS 203
                 333466999********99.555566666555554 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00074
   Chorion_2  23 i..ygrgrG.nrgYgrsvesgrr 42 
                 i  +g+g+G  +g+g ++ +  +
  KHJ34788.1 347 IihHGHGHGhGHGHGHGHHH--H 367
                 24455555544455544332..2 PP

>> SelP_N  Selenoprotein P, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5  11.0    0.0011       4.9     173     221 ..     153     201 ..     129     215 .. 0.41
   2 ?    6.0   6.6    0.0015       6.7     181     206 ..     343     368 ..     317     379 .. 0.57

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0011
      SelP_N 173 ekpaeaeektehehahshkqghkhhekhghhHkekeelsesqqee.peee 221
                 e ++  e + ++++ + h+++++h + hghh ++ +++s+s +++ +++e
  KHJ34788.1 153 EASEVPETERKNNSFEGHREIKRHDHGHGHHSHG-HSHSHSGHSSaNGAE 201
                 2222222223333333343333333333332222.222222222212222 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0015
      SelP_N 181 ktehehahshkqghkhhekhghhHke 206
                 k e   +h h +gh h + hghhH++
  KHJ34788.1 343 KSEGIIHHGHGHGHGHGHGHGHHHHS 368
                 22333455666777777777777775 PP

>> DUF2796  Protein of unknown function (DUF2796)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   4.5   5.5e-05      0.24      80     128 ..     160     211 ..     140     232 .. 0.60
   2 ?    1.4   5.5     0.062   2.8e+02      91     113 ..     339     367 ..     317     374 .. 0.52

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.5e-05
     DUF2796  80 eeeeedeeeeed.........ehdheheeeskkkdhdheeaeHsdie..aeyefeCakpe 128
                  e ++      +         +hdh h+++s  + h h+++ Hs  +   + +++C k +
  KHJ34788.1 160 TERKN------NsfeghreikRHDHGHGHHS--HGHSHSHSGHSSANgaESSKVDCSKHT 211
                 22222......12233345667778887777..667777777775541145667777665 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.062
     DUF2796  91 d.........ehdheheeeskkkdhdheeaeH 113
                 +         +h h h++ +    h h +++H
  KHJ34788.1 339 SsqlksegiiHHGHGHGHGH---GHGHGHHHH 367
                 02222223335555555444...444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       788  (0.0439511); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3815.73
//
Query:       KHJ34789.1  [L=140]
Description: putative peptide-n4-(n-acetyl-beta-glucosaminyl)asparagineamidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       808  (0.0450667); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1018.33
//
Query:       KHJ34790.1  [L=1067]
Description: putative nucleolar atpase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      6e-97  323.5   0.0    1.3e-96  322.4   0.0    1.6  1  GNAT_acetyltr_2  GNAT acetyltransferase 2
    5.2e-87  291.4   0.6    9.3e-87  290.6   0.6    1.4  1  tRNA_bind_2      Possible tRNA binding domain
    1.3e-64  217.3   0.2    4.5e-64  215.5   0.0    2.0  2  Helicase_RecD    Helicase
    1.5e-33  114.5   0.4    7.3e-33  112.4   0.0    2.3  2  DUF1726          Domain of unknown function (DUF1726)
    0.00029   20.6   0.1      0.037   13.7   0.0    2.5  2  AAA_30           AAA domain
     0.0038   17.4   0.0      0.048   13.9   0.0    2.5  2  Acetyltransf_1   Acetyltransferase (GNAT) family
     0.0052   17.1   0.3       0.27   11.5   0.0    3.1  4  AAA_22           AAA domain


Domain annotation for each model (and alignments):
>> GNAT_acetyltr_2  GNAT acetyltransferase 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  322.4   0.0  5.1e-100   1.3e-96       1     226 [.     540     770 ..     540     771 .. 0.94

  Alignments for each domain:
  == domain 1  score: 322.4 bits;  conditional E-value: 5.1e-100
  GNAT_acetyltr_2   1 klvallvssHYknsPnDLqllsDaPahklfvLlapkkek.kklpevlcvvqvalEGkiskesvknslsrgkrasGdlipwtlsqqfqdeefasl 93 
                      ++val+v+sHYknsP+DLql+sDaPah+lfvL+ p++e+ k lpe+lcv+qva+EGkis++sv+nslsrgkra+Gdlipw +sqqfqd+ef+sl
       KHJ34790.1 540 QMVALYVASHYKNSPDDLQLMSDAPAHQLFVLVPPVSENsKYLPEPLCVIQVAFEGKISRQSVMNSLSRGKRAAGDLIPWIISQQFQDDEFPSL 633
                      699*********************************999899**************************************************** PP

  GNAT_acetyltr_2  94 sGaRivRiAvhpelqkmGYGsralellekyyegklssleeeeekeeeeeeekeeeee....klsleeeklkprkelpplllklseekpekldyl 183
                      sGaRivRiA++pe+++mGYGs+alell+++y+ k+++l+ee+ + eee+  + ++ e    +l  ++ k+++ k++ppl++kls++ pe+ldy+
       KHJ34790.1 634 SGARIVRIATNPEYANMGYGSKALELLIDFYDRKFANLSEENGRIEEETIPRVTDLElangSLLDDNIKVRDIKKMPPLFSKLSDRLPERLDYV 727
                      **************************************99988776665443333334766777888999999********************* PP

  GNAT_acetyltr_2 184 gvsfGltseLlkFWkragfspvylrqtaneltGEhsaimlrsl 226
                      gvs+Glt++L++FWkr+ f+pvylrqt+neltGEh+++m+++l
       KHJ34790.1 728 GVSYGLTQQLHRFWKRSAFVPVYLRQTPNELTGEHTCVMIKPL 770
                      *****************************************97 PP

>> tRNA_bind_2  Possible tRNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  290.6   0.6   3.6e-90   9.3e-87       1     235 []     778    1016 ..     778    1016 .. 0.98

  Alignments for each domain:
  == domain 1  score: 290.6 bits;  conditional E-value: 3.6e-90
                   HHHHHHHHHHHHHHHHHHHHSS------S--------------------------------HHHHHHHHHHHHS---HHHHHSSSSHHHHHHHH-- CS
  tRNA_bind_2    1 WLgafakdFrkRflsLLsyqFrkfeavlaLsilesknkgeklekseekkeltkeeldellspfDlkRLesYannllDYhvilDllptlaklyFsgr 96  
                   W++af+kdF++Rfl+LL y+F++f++vlaLsi es++ g +l++s++++++ ke+ld+l+spfDlkRLesYann+lDYhvilDl+p+la lyF+gr
   KHJ34790.1  778 WIAAFSKDFHQRFLKLLKYHFKNFPSVLALSIGESASFGLRLDNSTQSTPFLKEDLDRLMSPFDLKRLESYANNMLDYHVILDLIPDLAMLYFNGR 873 
                   9*********************************************************************************************** PP

                   SSTTTS-SSSSSSHHHHHHTT---HHHHHHHHT--SSHHHHHHHHHHHHHHHHH-HHHHHHHHH-XXXXXXXX....XXXXXXXXXXXXXXXXXXX CS
  tRNA_bind_2   97 lkeevkLsavqsaiLlaiGLQrksvddlekeLnlpsnQvlalFvkiirkvskalreilekaieeelpkekeee....kaaeaeeeeakekelkple 188 
                   +++++kL+++qs+iLla+GLQ k+++dle eL+lps+Q+la+F+kiirk+s+++ +i+++a  ++lp++k++     +a+ a e+e+ ++++ +le
   KHJ34790.1  874 FETNIKLTGIQSSILLALGLQCKDLSDLEVELSLPSSQLLAMFIKIIRKISSFFASIVKNAHLDSLPERKQIGvsraDANAALEDEVIDTQFVALE 969 
                   ***********************************************************************98988877888899999******** PP

                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  tRNA_bind_2  189 esleeeLeeaakeveeklkekqrelidsldlekYaikgdeeewekae 235 
                   + le+eLee+++ev+++l+ekqreli+sl+l++Y+i++++  w++ae
   KHJ34790.1  970 QGLEDELEEGGDEVMKELREKQRELINSLPLDQYEIEESAPAWADAE 1016
                   *******************************************9986 PP

>> Helicase_RecD  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.96   2.5e+03     118     161 ..     134     173 ..      60     190 .. 0.66
   2 !  215.5   0.0   1.8e-67   4.5e-64       2     177 .]     282     497 ..     281     497 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.96
  Helicase_RecD 118 vlatTvhGYEGtGrgfslkflkqlkkekkrelreleleepiRya 161
                    ++a T++  EG G  + + +lk +++   ++l  l+++ + Ry+
     KHJ34790.1 134 LMARTIETVEGGG--MLILLLKGMTSL--KQLYTLSMDIHSRYR 173
                    5666777777766..445555554432..246666666666664 PP

  == domain 2  score: 215.5 bits;  conditional E-value: 1.8e-67
  Helicase_RecD   2 ltAdRGRGKSaalGlalaaliaegksnilvtapskenvktlfeflakglealglke..........eekkkkaekaelrvr.....kqrieyiapd 82 
                    ltA+RGRGKSaalG+a+aa+ia+g+sni++t+ps+en+ktlfef++kg++al++ +          ++ ++ka+   +rv+     +q+i+yi+p+
     KHJ34790.1 282 LTAARGRGKSAALGVAVAAAIAHGYSNIFITSPSPENLKTLFEFIFKGFDALNYLDhedysiiqstNPAFNKAI---VRVNiyrqhRQTIQYIRPQ 374
                    9*****************************************************99888888877755555555...333355567********** PP

  Helicase_RecD  83 ellklkeqadllvvDEAAaiplpllkkllekfkrvvlatTvhGYEGtGrgfslkflkqlkke..............................kkre 148
                    + + l  qa+llv+DEAAaiplpl++kll +++ v++a+T++GYEGtGr++slk++kql+++                               +r+
     KHJ34790.1 375 DSHVLG-QAELLVIDEAAAIPLPLVRKLL-GPYLVFMASTINGYEGTGRSLSLKLIKQLREQstvasiigvedaeladrstgksakthirgsGART 468
                    ****98.8*********************.*************************************************************9778* PP

  Helicase_RecD 149 lreleleepiRyaegdplEkwlndlLlLd 177
                    lre++l+epiRya+gd +Ekwln+lL+L+
     KHJ34790.1 469 LREVTLSEPIRYAKGDMVEKWLNNLLCLN 497
                    ***************************97 PP

>> DUF1726  Domain of unknown function (DUF1726)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.4   0.0   2.8e-36   7.3e-33       1      93 []     108     202 ..     108     202 .. 0.99
   2 ?   -1.3   0.1      0.83   2.1e+03      71      86 ..     782     797 ..     770     802 .. 0.81

  Alignments for each domain:
  == domain 1  score: 112.4 bits;  conditional E-value: 2.8e-36
     DUF1726   1 ykesekvLGqtydllvldlfealtPnalgrlvetVrGGGliilllppleelkqlyt...dfhkklvveplteevkkrfnkrfirklkehegilivd 93 
                 yke++k+LG+ty++++l++fea+tPn+++r++etV+GGG++illl+ +++lkqlyt   d+h+++++e+++ +v +rfn+rfi +l ++e++l++d
  KHJ34790.1 108 YKETDKILGNTYGMCILQDFEAITPNLMARTIETVEGGGMLILLLKGMTSLKQLYTlsmDIHSRYRTEAHD-DVVARFNERFILSLGKCESCLVID 202
                 9*********************************************************************6.*********************997 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.83
     DUF1726  71 vkkrfnkrfirklkeh 86 
                 ++k f +rf++ lk+h
  KHJ34790.1 782 FSKDFHQRFLKLLKYH 797
                 5788999999999988 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   1.4e-05     0.037      18     109 ..     277     402 ..     257     404 .. 0.71
   2 ?    4.1   0.1     0.013        33      21      52 ..     411     443 ..     408     487 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.4e-05
      AAA_30  18 drvavltGpAGtGKttalkalreaweaag.grviglAptgkaAkvLa...............eelgieastiakllkrlk................... 81 
                 + +++lt++ G GK+ al+++++a+ a+g  ++++ +p+ +  k+L                e+                                   
  KHJ34790.1 277 RNTVTLTAARGRGKSAALGVAVAAAIAHGySNIFITSPSPENLKTLFefifkgfdalnyldhED---------------Ysiiqstnpafnkaivrvni 360
                 4578899**************999999974789999*****99999934444443333333323...............12333333344444446667 PP

      AAA_30  82 ..............grarlepgtllivDEagmvdtkqlaall 109
                               +   l +++ll++DEa+ +    +++ll
  KHJ34790.1 361 yrqhrqtiqyirpqDSHVLGQAELLVIDEAAAIPLPLVRKLL 402
                 7778899999999865678899*********99888888876 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.013
      AAA_30  21 avltGpAGtGKttalkalreaweaa.ggrvigl 52 
                 ++++G+ GtG + +lk ++++ e++   ++ig+
  KHJ34790.1 411 STINGYEGTGRSLSLKLIKQLREQStVASIIGV 443
                 6799*******************9944556554 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0       0.3   7.7e+02       8      55 ..      21      74 ..      14      99 .. 0.65
   2 !   13.9   0.0   1.9e-05     0.048      55      89 ..     627     664 ..     583     675 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.3
                    HHHHTHHHHHHHHHHH....HHHH.....HHSTTCEEEEEEETTEEEEEEEEEEEET CS
  Acetyltransf_1  8 lvesffppnedaseee....fees.....fsleaegllvaeedgeliGfisllkipd 55
                     ++sff + +d+  ++    +  +          +  +++ +  +liGf s +k+ +
      KHJ34790.1 21 KKRSFFVVVGDRAKDVivhlH--YimssvDM-KQNKSVLWAYKSKLIGFTSHRKKRE 74
                    556666666666666655331..23333222.2235666779999*****9999888 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 1.9e-05
                     T...TSTTEEEEEEEEESGGGTTSSHHHHHHHHHHHHH CS
  Acetyltransf_1  55 d...ekggvayieslaVspeyrgkGlGsaLlealeera 89 
                     d   ++   a i ++a +pey ++G+Gs+ le l+++ 
      KHJ34790.1 627 DdefPSLSGARIVRIATNPEYANMGYGSKALELLIDFY 664
                     3556666778899*********************9975 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.5   0.0    0.0001      0.27       7     105 ..     279     394 ..     273     404 .. 0.74
   2 ?    1.6   0.1      0.12     3e+02      10      31 ..     413     434 ..     410     469 .. 0.80
   3 ?   -3.8   0.0       5.5   1.4e+04      53      88 ..     880     922 ..     869     927 .. 0.73
   4 ?   -3.3   0.0         4     1e+04      29      68 ..    1009    1055 ..    1004    1064 .. 0.54

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.0001
      AAA_22   7 ilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka.........................erlsseelle 80 
                  +++t+  G GK+  l   +  + +      ++ + +f+t ps++++k+l++ +++ ++  l++                         +         
  KHJ34790.1 279 TVTLTAARGRGKSAALGVAVAAAIA------HGYSNIFITSPSPENLKTLFEFIFKGFDA-LNYldhedysiiqstnpafnkaivrvniY--------- 361
                 5678999999999999888888744......59**************************6.55579*******99995555555444432......... PP

      AAA_22  81 aleqalrarav............ielliiDEaqhlrs 105
                    ++ r++               ell+iDEa  + +
  KHJ34790.1 362 ---RQHRQTIQyirpqdshvlgqAELLVIDEAAAI-P 394
                 ...3333333344445556666678*******987.5 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.12
      AAA_22  10 vtGesGtGKTtllrrlleqlde 31 
                 + G  GtG++++l+ +++  ++
  KHJ34790.1 413 INGYEGTGRSLSLKLIKQLREQ 434
                 66889*********99988753 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 5.5
      AAA_22  53 skdllrellralglelka.......erlsseellealeqalra 88 
                 ++ + + +l algl++k+         l s++ll+++ + +r+
  KHJ34790.1 880 LTGIQSSILLALGLQCKDlsdleveLSLPSSQLLAMFIKIIRK 922
                 5667788899999999987777777666777777776666665 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 4
      AAA_22   29 ldeeakaee.........erpevvfvtlpsstsskdllrellralglel 68  
                  ++++a+ae+         ++ +vv+v+ ++ +  +++ +  +++l+ el
  KHJ34790.1 1009 APAWADAEKqvlnaskagRKNPVVSVKNTKTK--RKIGETAAEILQAEL 1055
                  55555555566666665666666666666555..444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1067 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       851  (0.047465); expected 358.6 (0.02)
Passed bias filter:                      587  (0.0327403); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.79u 0.30s 00:00:01.09 Elapsed: 00:00:00.44
# Mc/sec: 7318.22
//
Query:       KHJ34791.1  [L=262]
Description: hypothetical protein EV44_g3306 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       652  (0.0363657); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.20s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2049.68
//
Query:       KHJ34792.1  [L=324]
Description: hypothetical protein EV44_g3842 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       678  (0.0378158); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2472.33
//
Query:       KHJ34793.1  [L=535]
Description: putative copper fist dna binding domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.4e-18   64.8   0.5    3.4e-18   64.8   0.5    2.1  2  Copper-fist  Copper fist DNA binding domain


Domain annotation for each model (and alignments):
>> Copper-fist  Copper fist DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.8   0.5   1.9e-22   3.4e-18       2      38 ..       3      40 ..       2      41 .. 0.96
   2 ?   -4.9   2.0         1   1.8e+04      20      30 ..      42      52 ..      42      55 .. 0.75

  Alignments for each domain:
  == domain 1  score: 64.8 bits;  conditional E-value: 1.9e-22
                 EETTEEEEETTTTTTSGGGG---.-SS-EEEE-S---- CS
  Copper-fist  2 lidgeKyACesCirGHRsstCkH.sdrplveirkkGRP 38
                 li+g K+ACe+CirGHRs++C+H ++r +v +rk+GRP
   KHJ34793.1  3 LINGMKMACEPCIRGHRSTKCNHaNERLMVPVRKPGRP 40
                 8**********************99************* PP

  == domain 2  score: -4.9 bits;  conditional E-value: 1
                 GG----SS-EE CS
  Copper-fist 20 stCkHsdrplv 30
                 s+C H ++ l 
   KHJ34793.1 42 SSCPHLKDHLC 52
                 78999877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       852  (0.0475208); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 4146.92
//
Query:       KHJ34794.1  [L=1001]
Description: putative transcription elongation complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.1e-58  195.5   1.5    2.1e-57  193.5   0.1    2.8  3  SPT16            FACT complex subunit (SPT16/CDC68)
    5.7e-52  175.8   0.2    2.3e-51  173.8   0.2    2.2  1  FACT-Spt16_Nlob  FACT complex subunit SPT16 N-terminal lobe d
    1.9e-24   86.5   0.0    4.2e-24   85.4   0.0    1.6  1  Peptidase_M24    Metallopeptidase family M24
      1e-15   57.9   0.7    3.3e-15   56.3   0.1    2.2  2  Rtt106           Histone chaperone Rttp106-like


Domain annotation for each model (and alignments):
>> SPT16  FACT complex subunit (SPT16/CDC68)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.36   1.6e+03      19      95 ..      99     128 ..      84     184 .. 0.65
   2 !  193.5   0.1   4.7e-61   2.1e-57       1     151 []     548     698 ..     548     698 .. 0.99
   3 ?   -4.0   0.0       3.4   1.5e+04      20      28 ..     884     892 ..     883     909 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.36
       SPT16  19 vPFhistiknvskseegdytylrinFnvpgsavgkkeealfknpeaifikeltfrskdekklqevfreikelkkkvk 95 
                 +P hi                                                 r kd+++ +++f +++++ k++ 
  KHJ34794.1  99 IPLHIL-----------------------------------------------VRGKDAEQNEKIFLQVNQIIKEAG 128
                 555553...............................................344444444444444444444443 PP

  == domain 2  score: 193.5 bits;  conditional E-value: 4.7e-61
       SPT16   1 iyvdkkketillPifGiavPFhistiknvskseegdytylrinFnvpgsavgkkeealfknpeaifikeltfrskdekklqevfreikelkkkvkkrea 99 
                 i+vd k++ti+lPi+G++vPFhi+tikn+sks+egd++ylrinF +pg+ vg+k++++f+  +a+f+++ltfrs d ++lq+++++i ++kk+v kre+
  KHJ34794.1 548 IIVDAKNSTIILPIMGRPVPFHIQTIKNASKSDEGDFSYLRINFLSPGQGVGRKDDQPFEDASAHFVRSLTFRSMDGDRLQDIANQIGNMKKDVVKREQ 646
                 89*********************************************************99************************************** PP

       SPT16 100 ekkekedlveqekLilskskrkprLkdlyirpniegkklaGtleaheNGlRy 151
                 ekke+ed++eq+kLi+ +++r++  ++++irp+++gk++ G+le+h+NGlRy
  KHJ34794.1 647 EKKEMEDVIEQDKLIEIRNRRPVFVDNVFIRPAMDGKRVPGKLEIHQNGLRY 698
                 ***************************************************9 PP

  == domain 3  score: -4.0 bits;  conditional E-value: 3.4
       SPT16  20 PFhistikn 28 
                 P+hi+ti  
  KHJ34794.1 884 PYHINTIPV 892
                 99***9965 PP

>> FACT-Spt16_Nlob  FACT complex subunit SPT16 N-terminal lobe domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.8   0.2   5.2e-55   2.3e-51       1     160 [.       6     165 ..       6     166 .. 0.96

  Alignments for each domain:
  == domain 1  score: 173.8 bits;  conditional E-value: 5.2e-55
                      --HHHHHHHHHHHHHHHHSHHHHH...STT-SEEEEEE-S--TT----HHHHHHHHHHSS--SSEEEEEESSEEEEEEEHHHHHTTGGGCTSTT CS
  FACT-Spt16_Nlob   1 idkkafkkRlkklysawkeeeedk...fssvdallvvlGksdeenpykKstalqtWLlGyefpdtlilltkkkiviltskkKaklLeplkekke 91 
                      id+  f++Rl+++++ wk ++      f++++++lv++G ++e  +++K +a+++WLlGyefp+tl+l+t +k++++t++kKa++Leplk +k 
       KHJ34794.1   6 IDARLFHERLSHFINGWKADKRAGdaiFNGASSILVLMGRTEEGINFQKHNAIHFWLLGYEFPATLFLFTLDKFWVVTTAKKARHLEPLKGGK- 98 
                      89****************555444579*****************************************************************9. PP

                      -.SSEEEEEEE-S-HHHHHHHHHHHHHHHHTTTSEEEE-TT----SHHHHHHHHHHCCCGGG.EEEE-HH CS
  FACT-Spt16_Nlob  92 eekvevellvreKdadenkknfeklieaikeagkkvGvlaKdkseGkfveewkkalkeakke.eevDvsa 160
                         +++++lvr Kda++n+k f ++ ++ikeagkkvGvlaK++++G+f+eewk+ +++++k+ eevD+s 
       KHJ34794.1  99 ---IPLHILVRGKDAEQNEKIFLQVNQIIKEAGKKVGVLAKETTAGPFIEEWKASFSKNSKDiEEVDISV 165
                      ...*****************************************************************96 PP

>> Peptidase_M24  Metallopeptidase family M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.4   0.0   9.3e-28   4.2e-24      26     207 ..     213     421 ..     179     423 .. 0.74

  Alignments for each domain:
  == domain 1  score: 85.4 bits;  conditional E-value: 9.3e-28
                    BHHHHHHHHHHHHHHHTT....................TCEESSSSEEEEGGGGGSTTT.BCSSSB--TTEEEEEEEEEEETTEEEEEEEEEECSS CS
  Peptidase_M24  26 terelaaeieattlkrhg....................arglafppivasgenaavlhy.tpndrvlkegdlvlidagaeydgyasDitrTvlvGk 100
                    ++  l ++++ + l ++                     + ++ + pi++sg + ++    + +d+ l++  +++  +g +y+ y s i+rT+lv+ 
     KHJ34794.1 213 KHSALSQKVDSK-LDDTKfwtkvelpnkqrmpsdfdptQLDWTHGPIIQSGGKFDLRISaQVDDEILHA-GVIVASMGLRYKSYSSLIARTYLVD- 305
                    444444444433.3332233333445555666777777899**************87773446666777.8***********************6. PP

                    GSHHHHHHHHHHHHHHHHHHHC-STTSBHHHHHHHHHHHHHHT..TBCCGBSSCSEEEESSSSSEEEEEESSSTTCSSB--TTBEEEEEEEEEEET CS
  Peptidase_M24 101 ftpeqrelyeavleaqeaaikavkpGvtlseidaaarevlesa..glakffphglGHgvGlevhdegpsvsresndgrkleeGmvftiEpgiyfap 194
                    +++ q+ +y+++l++++ ++k+++ Gv +++i+++a  +++++  +++k+f +++G g+G+e++d+   + + s+++r+l++Gm++ i +g+  ++
     KHJ34794.1 306 PNKSQESNYKLLLQVHNLVMKEIRDGVIVKDIYNKAITYIRNKkpEMEKHFLKNVGAGIGIETRDS-TLILN-SKNTRVLKDGMTLYITTGFNDIE 399
                    7778999**********************************7657789*****************9.66554.778****************9665 PP

                    TT.........EEEEEBEEEEE CS
  Peptidase_M24 195 ge.........ggvriedtvlv 207
                    +          ++  + dtv v
     KHJ34794.1 400 NPsaqhrrdkiYSLVLSDTVRV 421
                    2222344444467777777766 PP

>> Rtt106  Histone chaperone Rttp106-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       1.1     5e+03      37      65 ..     730     760 ..     709     763 .. 0.54
   2 !   56.3   0.1   7.3e-19   3.3e-15       2      87 ..     824     909 ..     823     911 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.1
      Rtt106  37 iesvsfeRv..svtsrtfdlvvelkkeeveF 65 
                 i +v+++      +++t d+ + ++ ++++F
  KHJ34794.1 730 IIHVHLKDPilIGKKKTKDVQFYREATDIQF 760
                 4444444225555666667766666666666 PP

  == domain 2  score: 56.3 bits;  conditional E-value: 7.3e-19
      Rtt106   2 gVkasrkakeGlLyflekgllfgfkkPllfiplediesvsfeRvsvtsrtfdlvvelkk...eeveFsmidqeelegidefvkskgiki 87 
                 gV+++   ++++ ++ +++l+ +++ P+++i+ledie++++eRv++  ++fd+v+++k+    ++++++i+ e+le+++e+++s +i +
  KHJ34794.1 824 GVPFR---SSVFCQPSTECLVQLTEPPFMVITLEDIEIAHLERVQFGLKNFDMVFVFKDfhrPPYHINTIPVESLENVKEWLDSVNIPF 909
                 67777...899**********************************************88888***********************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1001 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1158  (0.0645881); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.76u 0.26s 00:00:01.02 Elapsed: 00:00:00.42
# Mc/sec: 7125.60
//
Query:       KHJ34795.1  [L=413]
Description: putative lem3 cdc50 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-93  313.2   0.1    2.1e-93  312.9   0.1    1.1  1  CDC50     LEM3 (ligand-effect modulator 3) family / CDC50 fam


Domain annotation for each model (and alignments):
>> CDC50  LEM3 (ligand-effect modulator 3) family / CDC50 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  312.9   0.1   1.2e-97   2.1e-93       1     280 []      73     396 ..      73     396 .. 0.89

  Alignments for each domain:
  == domain 1  score: 312.9 bits;  conditional E-value: 1.2e-97
       CDC50   1 llvasksvkeleidYtsecataaesek.......................................easkekktCtvqftvpedlkapvyvyYeLtnfy 60 
                 ll+as++v+e+ +dY+ +c ++a++                                              + +Ct++f++p+ +++pv++yY+Ltnfy
  KHJ34795.1  73 LLFASAQVQEIILDYS-RCFQNAPEFPamalmpsnlvtshfnknsssvhgaapswsrrminytyapGVIVPTVQCTLNFSIPSAMEPPVLFYYKLTNFY 170
                 6899************.999888876699999********************************998899999************************** PP

       CDC50  61 QnhrryvkSrddsqlkgkaks.s.lksssssdCepletakekkekkkiiyPCGliAnslFNDtf....slveesssk...ltkvn....l.tkkgIawk 145
                 Qnhrry+kS++  ql+g+a+s + ++   ssdC+pl+t+  + + +k++yPCGl +ns+FNDtf     l   + +    +   n    + ++kgI+w+
  KHJ34795.1 171 QNHRRYAKSYHTGQLAGQAVSaDaIS---SSDCTPLTTEIVDGR-EKPYYPCGLAPNSVFNDTFfspvLL---NVPGaseS---NetyfMeKNKGISWE 259
                 *******************7655454...458****98877775.5******************544311...22222222...23345568899**** PP

       CDC50 146 sdkekkfknktky.ealeevvkPpnWakk.pe...eteipelkenedfivWmrtAalptFrKlyrrindeedLkagtyevdiennfpvksFkGtKsivl 239
                 sdk ++++   +y + +++v+ PpnW+ + p+   e++ p+lke+e+f+vWmr A+lptF+Kl++r nd++ +k+gty+v+i++nf+v+ ++GtKsi++
  KHJ34795.1 260 SDK-ELYGI-SEYaKDWSQVLVPPNWRLRyPNnytEDNHPNLKEDEAFQVWMRLAGLPTFSKLAQR-NDTHVMKTGTYSVNINHNFNVTDYGGTKSIII 355
                 ***.89**6.667799**********9998446889999***************************.999***************************** PP

       CDC50 240 sttswlGgknpflgiaYlvvGgiclvlaivflvthlikprk 280
                 st++++Gg+npflgiaY+vvGgic++l+++f+vthli prk
  KHJ34795.1 356 STRTVMGGRNPFLGIAYVVVGGICIILGTLFTVTHLIWPRK 396
                 *************************************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       667  (0.0372023); expected 358.6 (0.02)
Passed bias filter:                      547  (0.0305092); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 3187.95
//
Query:       KHJ34796.1  [L=279]
Description: putative peptidyl-prolyl cis-trans isomerase b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.6e-46  156.1   0.2    1.2e-45  155.6   0.2    1.1  1  Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans iso
  ------ inclusion threshold ------
       0.13   11.5   0.0       0.25   10.6   0.0    1.4  1  DUF3271        Protein of unknown function (DUF3271)


Domain annotation for each model (and alignments):
>> Pro_isomerase  Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.6   0.2   1.3e-49   1.2e-45       2     156 ..      36     192 ..      35     194 .. 0.89

  Alignments for each domain:
  == domain 1  score: 155.6 bits;  conditional E-value: 1.3e-49
  Pro_isomerase   2 vdietss..kGrivieLfadkaPktvenFlklvkeg......fYdgttFhRvikgfmvqgGdptgktsageqe.kkggesiraipdEitsklkh.k 87 
                    +d+++++  +Griv+ L+++++Pkt+enF+ l+ +g       Y+g+tFhRvik+fm+qgGd+t ++   ++  +       +++dE+ + lkh k
     KHJ34796.1  36 FDVSHDDkhLGRIVMGLYGKTVPKTAENFRVLA-TGekekgfGYEGSTFHRVIKDFMIQGGDFTRGDG--TGGkSIY---GDKFADEN-FILKHsK 124
                    5666655668***********************.566889999*******************999855..3221333...368*****.8999999 PP

  Pro_isomerase  88 rGalamartgkepnsagsqFfItlkeaphldgkytvFGkVveGmdvvekiekvetde.erpkknvkivsa 156
                    +G+l+ma++g   +++gsqFfIt+++ +hl+g ++vFG+V+eG+d+ve+i++v++d  +rp k+vki++ 
     KHJ34796.1 125 KGLLSMANSG--SDTNGSQFFITTSTPSHLNGLHVVFGEVLEGYDIVEQIQSVPKDYgDRPLKTVKITKS 192
                    9********8..5*****************************************999**********986 PP

>> DUF3271  Protein of unknown function (DUF3271)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   2.7e-05      0.25       2      86 ..       4      92 ..       3      96 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 2.7e-05
     DUF3271  2 iilsFfiLvifsnvkaatfqdannnnpksiayasvaqPtvtfekd....ekkhtkyLdiinnilrdesenikyayeggnyHwvitdfdi 86
                i +sFfi  +   + + t+q a++ +     y  v++    + +       k ++   +  ++l    +++ + yeg+ +H vi df i
  KHJ34796.1  4 IFISFFICTLVLALLTQTVQAADDPIITHKVYFDVSHDDKHLGRIvmglYGKTVPKTAENFRVLATGEKEKGFGYEGSTFHRVIKDFMI 92
                778999998888999999999999888888888888876554433100022333444444578889999999***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       370  (0.020637); expected 358.6 (0.02)
Passed bias filter:                      316  (0.0176251); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.21s 00:00:00.63 Elapsed: 00:00:00.36
# Mc/sec: 2293.97
//
Query:       KHJ34797.1  [L=496]
Description: putative dna mismatch repair protein msh-2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-17   63.5   0.1    4.4e-17   62.3   0.1    1.7  1  CDT1_C    DNA replication factor Cdt1 C-terminal domain
  ------ inclusion threshold ------
      0.073   12.7   0.1       0.14   11.8   0.1    1.4  1  CheW      CheW-like domain


Domain annotation for each model (and alignments):
>> CDT1_C  DNA replication factor Cdt1 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.3   0.1     5e-21   4.4e-17       2      95 ..     367     463 ..     366     464 .. 0.91

  Alignments for each domain:
  == domain 1  score: 62.3 bits;  conditional E-value: 5e-21
      CDT1_C   2 llerIraKearqalaamtreeelerrsallgrlpdvarilrllf....vaekksalpmeevvkklkdSlrtpvskeeaekhlrlLa.elaPdWvtivkl 95 
                 ller+raK++ q++ + + +e + rr+  l++l +v ++l +l     + +k+ ++++++v+ +lkdSl+  + +ee   +++l+a e+aP+W++i +l
  KHJ34797.1 367 LLERLRAKQLHQLQIPLPPSETEIRRKRSLAKLDEVSAVLAMLStsnsFGQKRVSFTLSTVLGRLKDSLN--IGREEGDLCIKLIAnEIAPEWIKIINL 463
                 9************988666666666666669*************************************97..9**********************9876 PP

>> CheW  CheW-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   1.5e-05      0.14      44      99 ..     220     282 ..     214     295 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.5e-05
                 ETTEEEEEEEHHHHCTSSSSTT.......STCEEEEEEEETTEEEEEEESEEEEEEEEECCGE CS
        CheW  44 lrGevipvidLrellglgpees.......rentrvivvelgnqvvGllVdevkgiqeivikqi 99 
                 +r +++ ++dL++llg+   +        ++ +r+i+ ++gn+++++ ++e kg    v++++
  KHJ34797.1 220 WRKRSVSLVDLQRLLGVINASIdkelrnkQKLSRLILSDYGNEKICIEISETKGNSGKVVRPV 282
                 99****************999999****99999*****************9999877777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.43
# Mc/sec: 3492.56
//
Query:       KHJ34798.1  [L=154]
Description: putative multiprotein-bridging factor 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-25   89.7   0.8      2e-25   89.0   0.8    1.3  1  MBF1        Multiprotein bridging factor 1
    3.4e-10   39.8   0.0    5.7e-10   39.1   0.0    1.3  1  HTH_3       Helix-turn-helix
     0.0044   16.9   0.0     0.0065   16.3   0.0    1.3  1  MRP-L27     Mitochondrial ribosomal protein L27
  ------ inclusion threshold ------
      0.029   14.7   0.0       0.05   14.0   0.0    1.4  1  HTH_31      Helix-turn-helix domain
      0.036   13.5   0.1        2.4    7.6   0.1    2.1  2  Proteasome  Proteasome subunit
        0.1   12.6   0.0       0.17   12.0   0.0    1.3  1  HTH_19      Helix-turn-helix domain


Domain annotation for each model (and alignments):
>> MBF1  Multiprotein bridging factor 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.0   0.8   6.8e-29     2e-25       1      72 []       2      78 ..       2      78 .. 0.97

  Alignments for each domain:
  == domain 1  score: 89.0 bits;  conditional E-value: 6.8e-29
        MBF1  1 qDWdsvtvigkkar.....katvaksesalnaArRsGavvetekKfaagtNkaskaq.egqnlaKlDreteelkpkkV 72
                +DWdsvt+ig+k+r     ++tv++++salnaA+R Gav++tekK + ++N +sk+  egq+l+K+Dr+++++kp +V
  KHJ34798.1  2 DDWDSVTKIGSKTRgggvaRETVVRGKSALNAAQRNGAVLATEKK-FTSGNLSSKPGvEGQHLTKVDRSDDIVKPTTV 78
                6********************************************.678999999999*****************998 PP

>> HTH_3  Helix-turn-helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1   0.0   1.9e-13   5.7e-10       3      52 ..      88     139 ..      86     141 .. 0.92

  Alignments for each domain:
  == domain 1  score: 39.1 bits;  conditional E-value: 1.9e-13
                 HHHH..HTTHHHHHHHHHHTSSHHHHHHHHTTSSCSBHHHHHHHHHHHTSEH CS
       HTH_3   3 elRk..qlglsqeeLAeklGvsrstisriEnGernPsletlkklakaLgvsl 52 
                 e+R+  + +++q++LA k++ ++s i++ E+G ++P+++ l  ++k+Lg++l
  KHJ34798.1  88 ERRQkmEPKMTQKDLATKCNTTQSIIADFERGTAIPDQKLLMNMEKVLGIKL 139
                 677777899****************************************987 PP

>> MRP-L27  Mitochondrial ribosomal protein L27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   2.2e-06    0.0065      16     107 ..      45     133 ..      33     138 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.2e-06
                 HHHH---S---SEEEETTTEEEE-TTTS-EE-----TT----SEE-TTS---------HHHHHHHH.HHHHHHHCC---------GGGCT--S CS
     MRP-L27  16 ktfykgrgargiGiltssgkyveirekvrelvvPdlegfkLKpyVsykapevkqseltsqdLfnev.vaqkiikdfkegtldedllekklkep 107
                 k+f  g  ++  G+   +g++ ++ ++  ++v P+  g +    +s + ++++ + +t +dL  +   +q ii df+ gt  +d+ +    e+
  KHJ34798.1  45 KKFTSGNLSSKPGV---EGQHLTKVDRSDDIVKPTTVGKEVGSAISERRQKMEPK-MTQKDLATKCnTTQSIIADFERGTAIPDQKLLMNMEK 133
                 55666666666666...688899999999**********************9999.******998725799*********9999886666555 PP

>> HTH_31  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0   1.7e-05      0.05       9      54 ..      89     135 ..      81     141 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.7e-05
      HTH_31   9 lRera..GLsqeevAerlgvsestlsrlEqGrrgrpspavlealaral 54 
                 +R++    ++q+++A  ++ ++s + + E+G+  +p    l  +  +l
  KHJ34798.1  89 RRQKMepKMTQKDLATKCNTTQSIIADFERGTA-IPDQKLLMNMEKVL 135
                 44433338************************9.79776665555555 PP

>> Proteasome  Proteasome subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.1   0.00081       2.4       2      29 ..      25      52 ..      24      59 .. 0.86
   2 ?    4.2   0.0    0.0089        27     118     164 ..      60     103 ..      57     115 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.00081
                HHS-EEEEEEETTEEEEEEEEEEEETTE CS
  Proteasome  2 kkGttvvGikgkdgvvlaadkratagsk 29
                 +G++++  + ++g+vla++k+ t+g+ 
  KHJ34798.1 25 VRGKSALNAAQRNGAVLATEKKFTSGNL 52
                589999999***************8875 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0089
                 EEEEEEEETTSEEEEESSEEEESTTHHHHHHHHHHHHSTTBSHHHHH CS
  Proteasome 118 gpeLyqidpsGsyieekdavaiGsgseaaktalekeykedltleeav 164
                 g +L ++d s +++++   +++G+   +a++  ++++++++t++++ 
  KHJ34798.1  60 GQHLTKVDRSDDIVKP---TTVGKEVGSAISERRQKMEPKMTQKDLA 103
                 4688888888888887...69**********************9975 PP

>> HTH_19  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   5.5e-05      0.17      12      45 ..      96     128 ..      92     140 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 5.5e-05
      HTH_19  12 gltqeelaerlgisrskisaiEngkkdvpsaell 45 
                 ++tq++la ++ +++s i+ +E g    p+ +ll
  KHJ34798.1  96 KMTQKDLATKCNTTQSIIADFERGTA-IPDQKLL 128
                 8***********************88.8886665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (154 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1168.64
//
Query:       KHJ34799.1  [L=413]
Description: putative gpi-anchored cell wall beta-endoglucanase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.9e-06   25.9   0.8    1.4e-05   24.9   0.8    1.5  1  Glyco_hydro_17  Glycosyl hydrolases family 17


Domain annotation for each model (and alignments):
>> Glyco_hydro_17  Glycosyl hydrolases family 17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9   0.8   7.8e-10   1.4e-05     156     289 ..     177     290 ..     154     310 .. 0.78

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 7.8e-10
  Glyco_hydro_17 156 vvdpivvflagtnspllvnvyPYfvysndpsnvsLdyalfqkqslvndnglayrnlfDaildavyaaqekkGgtdielvvsEtGWPsdGstgasl 250
                      vd +  +++g+n++++++++ ++ +  d       y +fq  ++++    + ++lf + l       ++ G +   +++ EtGWP  G+   + 
      KHJ34799.1 177 HVDTWTAWVNGSNQAVIDASD-WIGM--D------AYPYFQDTQVNS--IENGASLFNKAL---VDTKNAVGAK--PVWITETGWPVSGK---KS 252
                     599******************.4444..3......389**9998886..666789998644...4444555555..57************...55 PP

  Glyco_hydro_17 251 enaatyveNlikkvkeGtpskpgkgietyvfalFdEnqK 289
                     + a t  +N++  +++  +   g +++t  f l d ++ 
      KHJ34799.1 253 GYAETGATNAKTYWNQVGCPIFG-AVNTWWFTLDDTDNG 290
                     68999999******976666677.799999998877664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 3222.27
//
Query:       KHJ34800.1  [L=876]
Description: putative rho-gtpase-activating protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.8e-17   63.0   0.2    6.6e-17   61.7   0.2    1.7  1  RhoGAP    RhoGAP domain
    1.1e-10   41.4   0.0    2.3e-10   40.4   0.0    1.6  1  DEP       Domain found in Dishevelled, Egl-10, and Pleckstrin
    1.1e-07   32.0   0.0    4.1e-07   30.2   0.0    2.1  1  FCH       Fes/CIP4, and EFC/F-BAR homology domain
  ------ inclusion threshold ------
      0.016   15.1   0.3      0.044   13.7   0.3    1.7  1  DUF3385   Domain of unknown function (DUF3385)
      0.052   13.7   0.3       0.13   12.4   0.3    1.6  1  Nod1      Gef2-related medial cortical node protein Nod1
       0.13   12.5   0.3         25    5.1   0.0    3.1  3  B3R       Poxviridae B3 protein


Domain annotation for each model (and alignments):
>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.7   0.2   2.2e-20   6.6e-17      29     149 ..     512     637 ..     478     640 .. 0.89

  Alignments for each domain:
  == domain 1  score: 61.7 bits;  conditional E-value: 2.2e-20
                 HHHHHHHHHHHHTGGGCT.TTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHHHHTS....SSHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHH CS
      RhoGAP  29 arvkelreafdkgkavds.dleeedvhavaslLKrfLrelpepLltkelyeelieaaks....edeeerlealkellekLPkenrdtLryLlehLkrva 122
                 +++++lr+ +++gk  +  +le +d+  vas+LK++L elp++L++ ++ye +  ++++     ++ +r++ ++++l++L   n +tL ++l h++r+ 
  KHJ34800.1 512 RQTHKLRDILNTGKPFTAeSLEPYDLSIVASVLKLYLLELPDSLVSSHIYEIMRTIYSTpasqSTQATRISVIQNTLQQLRLSNIATLDAILTHFTRLL 610
                 56789999999999988889*******************************999866555444777788****************************** PP

                 HTHHHH---HHHHHHHHHHHHHT-TSS CS
      RhoGAP 123 enskenkMtaknLaivfaPtLlrpkse 149
                 e  + ++   ++La+v++P++lrpk+e
  KHJ34800.1 611 ELTSADETYTSALATVLSPCILRPKTE 637
                 ************************876 PP

>> DEP  Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   0.0   7.7e-14   2.3e-10       2      72 .]     214     285 ..     213     285 .. 0.95

  Alignments for each domain:
  == domain 1  score: 40.4 bits;  conditional E-value: 7.7e-14
                 S-SCEEECT.TEEESSE-HHHHHHHHHHHHTSSSSHHHHHHHHHHHHHCTSCECSSSSHCC--SSSSS-EEE CS
         DEP   2 vklkdrrkh.lktypncftGseavdWLldnldiedreeAvalgqlLldqgliehvedkhqeFrdskqafYqf 72 
                 vkl + ++  l ty+n+  Gs++v++ ++n+ +++ ++A+++gq+L+ +g+++ v++ ++ F +s+++ Yq+
  KHJ34800.1 214 VKLGETKVPiLGTYQNTTCGSDIVEYFQKNMGATSISHAERIGQDLITHGFLRLVGNVGNIFANSSKMNYQW 285
                 677778888899***********************************************99**********8 PP

>> FCH  Fes/CIP4, and EFC/F-BAR homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   1.4e-10   4.1e-07       1      76 [.      16      93 ..      16      94 .. 0.93

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 1.4e-10
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT----T.T.-.....HHHHHHHHHHHHHHHHHHHHHH CS
         FCH  1 gfkvlqkrleqgialledlqeflkeRaeiEkeYakkLqkLakkylkr.r.kkkseestlvtawtvlleeteklaqshl 76
                g+ vl+ +l+qgia ++++ +  + Rae E+ Y+ kL    + ++k  + +++++++++++a++ + +e++  a+sh+
  KHJ34800.1 16 GLGVLFGKLQQGIAENQQVLTIARLRAEAEELYSLKLGEAGSATEKIiGgFSRDDGASVKKAYDGIQTEIKGAANSHR 93
                6789***************************************9999645667799********************97 PP

>> DUF3385  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.3   1.5e-05     0.044      89     156 ..     561     626 ..     529     629 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.5e-05
     DUF3385  89 naLl.rilkdpslsshhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlrefllqqLatL 156
                  +++ +i + p+ +s +a+ +++i n +++l+l+ + +Ld i+ ++ ++++ t++   +e+++++Lat 
  KHJ34800.1 561 YEIMrTIYSTPASQSTQATRISVIQNTLQQLRLSNIATLDAILTHFTRLLELTSA---DETYTSALATV 626
                 44442566888889999**********************************8665...99999999986 PP

>> Nod1  Gef2-related medial cortical node protein Nod1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.3   4.3e-05      0.13      35     123 ..     545     630 ..     537     638 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 4.3e-05
        Nod1  35 kdkilekaGylLsekliqrLenldldlnskslkekavqqvkslleeLpesklklLevvfsivselllkLplkdqcetvlasiaavvaPr 123
                 k ++le   +l+s+++ + ++ + +   s+s++ + +  +++ l++L  s+++ L+++++    ll         et + ++a+v++P 
  KHJ34800.1 545 KLYLLELPDSLVSSHIYEIMRTIYSTPASQSTQATRISVIQNTLQQLRLSNIATLDAILTHFTRLLELT---SADETYTSALATVLSPC 630
                 5555556667888888888899999999999*****************************999987643...5778889********96 PP

>> B3R  Poxviridae B3 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0    0.0084        25      62      94 ..     154     186 ..     136     218 .. 0.81
   2 ?    3.1   0.0     0.035     1e+02      36      95 ..     405     462 ..     387     471 .. 0.85
   3 ?   -0.5   0.0      0.47   1.4e+03      67     116 ..     662     711 ..     651     714 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0084
         B3R  62 ealeylselkesggwsprpemqefeypdgvedt 94 
                 e +e  +++   g  sp+    ef+ pd ved 
  KHJ34800.1 154 EDVEEENKMAFQGELSPKSAKTEFKAPDKVEDE 186
                 45555566677899*****************95 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.035
         B3R  36 qnlipstvktnlymktmgsciqmdsmealeylselkesggwsprpemqefeypdgvedte 95 
                  n+ips   t   m      iq +    l yl e   +gg+ p+  + e  y    e+t 
  KHJ34800.1 405 SNVIPSMQSTIDKMMLYQETIQPE--GDLRYLLENYRTGGFFPKVTVYENYYNSADEQTF 462
                 588999998888888888888876..579******************9999988888775 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.47
         B3R  67 lselkesggwsprpemqefeypdgvedtesierlveeffnrselqagesv 116
                 + elk s  +sp     e   p      es  +   e   r+   ag s+
  KHJ34800.1 662 FEELKRSSAYSPTSVSSEDSRPRATSSDESNRKANMEARVRAIKAAGGSI 711
                 679**********9999999999999999988887777777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (876 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.66u 0.30s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 5842.82
//
Query:       KHJ34801.1  [L=129]
Description: hypothetical protein EV44_g6234 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0018   18.8   0.1      0.002   18.6   0.1    1.2  1  CYYR1         Cysteine and tyrosine-rich protein 1
      0.006   17.4   0.0     0.0087   16.9   0.0    1.2  1  EphA2_TM      Ephrin type-A receptor 2 transmembrane domain
  ------ inclusion threshold ------
      0.031   14.9   4.9      0.031   14.9   4.9    1.8  2  RCR           Chitin synthesis regulation, resistance to Cong
      0.033   14.0   0.0      0.043   13.7   0.0    1.2  1  DUF1418       Protein of unknown function (DUF1418)
      0.035   13.9   0.0      0.044   13.6   0.0    1.1  1  Trp_oprn_chp  Tryptophan-associated transmembrane protein (Tr
      0.073   12.9   0.0      0.087   12.7   0.0    1.1  1  TMEM51        Transmembrane protein 51
       0.19   10.5   0.0       0.19   10.5   0.0    1.0  1  DUF2207       Predicted membrane protein (DUF2207)


Domain annotation for each model (and alignments):
>> CYYR1  Cysteine and tyrosine-rich protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.1   7.8e-07     0.002      59     134 ..      48     124 ..      17     129 .] 0.86

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 7.8e-07
       CYYR1  59 ivfgvvflmgvvagialcvcmcvknsrgtr.vgvlraayintvsqsypgapppysydyemefaadlpppytptpprs 134
                 i+ g++ ++gv   i   +c+ +++ r+ r    l +  + t  q+y      y+  ++  ++   p py   ++ s
  KHJ34801.1  48 ILAGIMVFLGVTVLITALICLAIRKRRSRRrQTSLYTPAVGTTQQGYFNGSQTYAPPHNAPPKYGGPQPYGGVTQPS 124
                 78899999****************999976156789999*******************************8765544 PP

>> EphA2_TM  Ephrin type-A receptor 2 transmembrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.0   3.4e-06    0.0087       4      60 ..      52     105 ..      48     110 .. 0.58

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 3.4e-06
    EphA2_TM   4 aavaglvllvilvilvlvlvrrrsknrkqksdlkskeekkeeensgk..kglktYvDPh 60 
                 ++v+  v+++i+ +++l +++rrs++r+ +       +    +++++  +g +tY  Ph
  KHJ34801.1  52 IMVFLGVTVLITALICLAIRKRRSRRRQTSLY-----TPAVGTTQQGyfNGSQTYAPPH 105
                 55666677777777777776555555554443.....3333333333222699998888 PP

>> RCR  Chitin synthesis regulation, resistance to Congo red
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       5.4   1.4e+04      19      36 ..      11      28 ..       9      32 .. 0.70
   2 ?   14.9   4.9   1.2e-05     0.031       1      53 [.      46     115 ..      46     128 .. 0.61

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 5.4
         RCR 19 tlrvakrRrrrGlqplyg 36
                t+r+a  Rr  G+ + yg
  KHJ34801.1 11 TARSALSRRAYGYCVRYG 28
                566777788888777666 PP

  == domain 2  score: 14.9 bits;  conditional E-value: 1.2e-05
         RCR   1 RWvlfaiiivl...illvllltlrvakrRrrrGlqplygtgWlvsa..............pppPsYgqsq 53 
                 RW+l+ i+++l   +l+  l++l + krR+rr ++ ly  +  +++              ++pP+Yg  q
  KHJ34801.1  46 RWILAGIMVFLgvtVLITALICLAIRKRRSRRRQTSLYTPAVGTTQqgyfngsqtyapphNAPPKYGGPQ 115
                 9***999987532266666677777777777655555544333221345555667777778888887653 PP

>> DUF1418  Protein of unknown function (DUF1418)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   1.7e-05     0.043      46      76 ..      51      81 ..      40      94 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.7e-05
     DUF1418 46 ivmiflGvllllPaavalvwrvaqalapllr 76
                 +m+flGv++l+ a ++l  r  +    + +
  KHJ34801.1 51 GIMVFLGVTVLITALICLAIRKRRSRRRQTS 81
                58****************9987666555555 PP

>> Trp_oprn_chp  Tryptophan-associated transmembrane protein (Trp_oprn_chp)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   1.7e-05     0.044      63     102 ..      42      81 ..      39     108 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.7e-05
  Trp_oprn_chp  63 rglgrrvvgvllalagagaavaalslltdpadaaraaaaa 102
                    ++gr++++ +++ +g++++++al  l+ ++   r ++++
    KHJ34801.1  42 SRFGRWILAGIMVFLGVTVLITALICLAIRKRRSRRRQTS 81 
                   589***********************99988888877744 PP

>> TMEM51  Transmembrane protein 51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   3.4e-05     0.087      64      95 ..      50      82 ..      46     122 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 3.4e-05
      TMEM51 64 AyVLvGaGvalLlLs.icLgirdkkrarqeeee 95
                A ++v  Gv++L+ + icL+ir+++ +r++++ 
  KHJ34801.1 50 AGIMVFLGVTVLITAlICLAIRKRRSRRRQTSL 82
                66788889999998757*****98766654433 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   7.3e-05      0.19     196     242 ..      34      80 ..       8     112 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 7.3e-05
     DUF2207 196 ntreraarlslallillilllilllllllllliklllwkkygrepkv 242
                 +t +r+ ++++ ++il+++ ++l + +l+ +li l + k+  r++++
  KHJ34801.1  34 STCDRSFWSRFGRWILAGIMVFLGVTVLITALICLAIRKRRSRRRQT 80 
                 57789999999999999999999999999999997777775555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1001  (0.0558313); expected 358.6 (0.02)
Passed bias filter:                      745  (0.0415528); expected 358.6 (0.02)
Passed Vit filter:                       107  (0.00596798); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.44u 0.27s 00:00:00.71 Elapsed: 00:00:00.43
# Mc/sec: 908.26
//
Query:       KHJ34802.1  [L=675]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-28   99.8   0.0    1.8e-28   99.8   0.0    3.5  4  SAE2          DNA repair protein endonuclease SAE2/CtIP C-ter
  ------ inclusion threshold ------
        6.5    6.1  19.6        1.2    8.5   9.7    2.6  2  DUF3552       Domain of unknown function (DUF3552)


Domain annotation for each model (and alignments):
>> SAE2  DNA repair protein endonuclease SAE2/CtIP C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.2      0.63   5.7e+03      64      97 ..      43      76 ..      23      95 .. 0.55
   2 ?    0.7   1.4      0.12   1.1e+03      18      68 ..     142     185 ..     128     229 .. 0.46
   3 ?   -2.2   0.1         1     9e+03      90      93 ..     291     294 ..     253     325 .. 0.48
   4 !   99.8   0.0   2.1e-32   1.8e-28       1     111 []     527     637 ..     527     637 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.63
        SAE2 64 lak.msseerqeleieakkkklankfgrHRhafer 97
                l++ ++++++ e++ie++++ l+++  r+++a +r
  KHJ34802.1 43 LQQlRKNSSKVEKLIENNAH-LIDELERCKAAAAR 76
                33312223333444444443.55555555555444 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.12
        SAE2  18 CtkpeCcgkkfravaelearkeep...........taskeeedkklleeklgdeayklakms 68 
                 C + +C  +k+++  + ++rk+++                       ++k        +km+
  KHJ34802.1 142 CNQLKCAWAKMEKKLREQKRKSREwalrlenrdniI-----------KRK-------DQKMK 185
                 777777444444333333333333333333222221...........222.......11111 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 1
        SAE2  90 rHRh 93 
                  H  
  KHJ34802.1 291 THYS 294
                 2211 PP

  == domain 4  score: 99.8 bits;  conditional E-value: 2.1e-32
        SAE2   1 aFdevvrgkderkclpgCtkpeCcgkkfravaelearkeep.taskeeedkklleeklgdeayklakmsseerqeleieakkkklankfgrHRhafera 98 
                 aF+evvrg++++k l+gC k  Cc  k+ra+ae++++++++ + s++e+d+ +lee+lgd+aykl+ ms+ + +el+i+ak+++lank+g HRha++ +
  KHJ34802.1 527 AFSEVVRGNARKKGLQGCLK-PCCAPKYRALAEISRDPSKNlSISQQESDRLMLEEFLGDNAYKLQDMSEMDMKELLIQAKTRDLANKHGIHRHAYQNP 624
                 7*******************.5669**********99988877789999999*********************************************** PP

        SAE2  99 ksPpgFWeidFPt 111
                 ++P g W++dFPt
  KHJ34802.1 625 ETPVGIWDADFPT 637
                 ************7 PP

>> DUF3552  Domain of unknown function (DUF3552)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   2.3     0.011     1e+02     118     173 ..      42      97 ..      30     103 .. 0.88
   2 ?    8.5   9.7   0.00014       1.2      60     138 ..     143     221 ..     122     226 .. 0.82

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.011
     DUF3552 118 keqsleekeeeleelveeqrqeLerisgLtkeeAkeilleeveeelkheaAkmike 173
                 + q+l+++++++e+l+e++ + + ++   +++ A+  lle+ ++ l  e + +  +
  KHJ34802.1  42 ELQQLRKNSSKVEKLIENNAHLIDELERCKAAAARVDLLEKENKALATEHTHILSK 97 
                 568999*********************************99999999998877665 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00014
     DUF3552  60 eeihklreelekelkerrnelqrlekRllqkeetLdrkeeslekkeesleekekelkqkeqsleekeeeleelveeqrq 138
                 ++++ + +++ek l+e++++ ++   Rl+++++ ++rk++++++ e+++ e +++l ++e+  +   ++ ++ +++ ++
  KHJ34802.1 143 NQLKCAWAKMEKKLREQKRKSREWALRLENRDNIIKRKDQKMKRLEQEFIELKQRLGTDEKVGDCVAKNSSNSISQSDE 221
                 5555666899*********************************************999888766666666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (675 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1577  (0.0879581); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.67u 0.29s 00:00:00.96 Elapsed: 00:00:00.45
# Mc/sec: 4554.98
//
Query:       KHJ34803.1  [L=514]
Description: putative glycerol proton symporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    8.8e-94  314.9  26.8      1e-93  314.7  26.8    1.0  1  Sugar_tr         Sugar (and other) transporter
    2.3e-21   76.1  33.5    3.3e-15   55.9   9.7    2.1  2  MFS_1            Major Facilitator Superfamily
     0.0033   17.9   0.2      0.021   15.3   0.2    2.4  1  Phage_holin_3_2  Phage holin family 2
  ------ inclusion threshold ------
        1.5    8.8   7.2       0.18   11.7   2.2    2.1  2  Tail_VII         Inovirus G7P protein


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  314.7  26.8   2.3e-97     1e-93       3     451 ..      18     476 ..      16     477 .. 0.94

  Alignments for each domain:
  == domain 1  score: 314.7 bits;  conditional E-value: 2.3e-97
                 HHHHHHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH.......HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TT CS
    Sugar_tr   3 lvaalggllfgYdtgvigafltllkfaknfglsksksskee....ssvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaak 97 
                 lvaa + +lfgY  + ig+ l+l++  + f +  +++++ +     ++l+g++vs+f++Ga++G++  +++gd++GR+ks+ i++v  + g++l+a + 
  KHJ34803.1  18 LVAAPCFILFGYSQAGIGGLLSLPSWTSTFPAIDTTNTTGAvksrHASLQGIVVSSFVLGALAGCIACMYMGDILGRRKSIFIGGVSIMLGQILCASSS 116
                 78888889*****************9999998888888887899999**************************************************** PP

                 TTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-...TTHHHHHHHCCHHHHHHHHHHGGGS-- CS
    Sugar_tr  98 gknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsn...adgwrillglqlvpallllilllflPE 193
                    s+ ++ivgR + G ++G++s +vP++++E +p+++Rg+ v+l  ++i++G+ + ++++lg + ++n   + +wr++l+l  ++  +l+  ++++PE
  KHJ34803.1 117 ---SLAQFIVGRTFNGAAIGIFSSTVPVWQAECSPPAHRGKHVVLDGVFISMGFSIVSWVNLGSSLIKNsssSITWRLPLALPEIFIFILMSSIFLMPE 212
                 ...9*****************************************************************9999************************** PP

                 -HHHHHHTT-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH........HTTHHHHSH.....HHHHHHHHHHHHHHTTHHHHHHHTTTHHH.HSS- CS
    Sugar_tr 194 SPrylvekgkeeeakevlaklrgeedadrelaeekdsleaeqeee...kaswkellsskt..vrqrlligvvlqifqqltGinaimyysptife.nlgl 286
                 SPr+lv++++++ea e+l+++++ + +d+++    + ++ ++++    k+s++ ++++     ++r+ ++++lq+ qq+ G n i +y+p+ife nlg+
  KHJ34803.1 213 SPRWLVQVNRYQEAAESLSRIKDLPIDDPSVTSALEDFRTAVQQGitkKTSLGDMFTMGPdkLFYRFCLCILLQFYQQMGGSNLISIYAPVIFEqNLGI 311
                 ************************77777777777777777766677789999999984489*******************************736899 PP

                 THH..HHHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTT CS
    Sugar_tr 287 sks..llvtiivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilgivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsv 383
                       + ++ + +++f+++fva+f++drfGRR+l++++++gm  c+++l+ ++  +  ++ +as++++++i+l+ ++  +g+ +  +++++E++p s+
  KHJ34803.1 312 HGRtaRILSGATLTWKFLSSFVAFFTIDRFGRRPLFMFSGVGMGSCMLVLA-ITTGCDMNNLVASYISVAAIFLYNFFVPIGFLGANFLYCAEIAPVSL 409
                 8888889999****************************************9.77777777789************************************ PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGG CS
    Sugar_tr 384 Rskalaiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrtleeieel 451
                 R   +ai++  +wl+nf+is+  p++  +ig  ++flvf ++ +   i v++ +pet gr+leeie +
  KHJ34803.1 410 RVGMAAISTGNHWLWNFVISMASPVAIASIG-HWYFLVFSVFGLSIPISVWLVFPETMGRSLEEIEFA 476
                 *******************************.*********************************966 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.9   9.7   7.4e-19   3.3e-15       6     187 ..      37     225 ..      20     269 .. 0.76
   2 !   26.3  15.7   7.3e-10   3.3e-06       2     178 ..     283     468 ..     280     500 .. 0.78

  Alignments for each domain:
  == domain 1  score: 55.9 bits;  conditional E-value: 7.4e-19
       MFS_1   6 flsalarsilgpalplalaedlg....ispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslw.lllvlrvlqGlga 99 
                 +ls  +++ ++pa+    +++ g      +s +g++++ + lga+++ +  ++++d +Grr+ +++g ++  lg +l++ +ss+   ++v+r + G++ 
  KHJ34803.1  37 LLSLPSWTSTFPAIDT--TNTTGavksRHASLQGIVVSSFVLGALAGCIACMYMGDILGRRKSIFIGGVSIMLGQILCA-SSSSLaQFIVGRTFNGAAI 132
                 3333344444444432..22222332233455999***************************99999999999944444.4666669************ PP

       MFS_1 100 galfpagaaliadwfpkeergraigllsagfslGa.ilg.pllggllasslg....Wravfyilaivsllafv.lfllllpeepperkrkspkee 187
                 g++ +++ ++ a+ +p+ +rg+ + l ++++s+G+ i+    lg+ l+ + +    Wr++  +  i+ ++++  +  +l+pe+p+    ++  +e
  KHJ34803.1 133 GIFSSTVPVWQAECSPPAHRGKHVVLDGVFISMGFsIVSwVNLGSSLIKNSSssitWRLPLALPEIFIFILMSsI--FLMPESPRWLVQVNRYQE 225
                 ***********************************555566688899876667999*********9999996633..777777776666666665 PP

  == domain 2  score: 26.3 bits;  conditional E-value: 7.3e-10
       MFS_1   2 llaaflsalarsilgpalpl.alaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa.....ss...lwlllvl 91 
                 +l++f   ++ s+l++++ + +  ++lgi + ++ +l ++     +++s+++ + +drfGrr++++++ +++++++l+l+++     ++   +++ +++
  KHJ34803.1 283 ILLQFYQQMGGSNLISIYAPvIFEQNLGIHGRTARILSGATLTWKFLSSFVAFFTIDRFGRRPLFMFSGVGMGSCMLVLAITtgcdmNNlvaSYISVAA 381
                 567788888888899999988******************************************************77777533445422543668**** PP

       MFS_1  92 rvlqGlgagalfpagaaliadwfpkeergraigllsagfslGa.ilgpllggllasslgWravfyilaivsllafvlfllllpeeppe 178
                  +l  ++  ++f +++ l  +  ++     +++ +s+g+      +  +++++ ++s+g ++ f+++ +++l   + ++l++pe+  +
  KHJ34803.1 382 IFLYNFFVPIGFLGANFLYCAEIAPVSLRVGMAAISTGNHWLWnFVISMASPVAIASIG-HWYFLVFSVFGLSIPISVWLVFPETMGR 468
                 ********988888888777766666888888888888777774444666666666666.6779999999999988666666665444 PP

>> Phage_holin_3_2  Phage holin family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.2   4.7e-06     0.021      11      66 ..      98     153 ..      95     162 .. 0.90

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 4.7e-06
  Phage_holin_3_2  11 LlviGalialGklLvseepitlrLfiGRvilGsavslvagvaLvqfpdlsplavvG 66 
                      +++ G+ i lG++L ++    ++ ++GR+  G+a+ + ++ + v+  + sp a  G
       KHJ34803.1  98 IFIGGVSIMLGQILCASSSSLAQFIVGRTFNGAAIGIFSSTVPVWQAECSPPAHRG 153
                      577799***************************************99999988776 PP

>> Tail_VII  Inovirus G7P protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   2.2     4e-05      0.18      16      35 ..      68      87 ..      64      89 .. 0.91
   2 ?   -3.9   0.2         3   1.4e+04      12      19 ..     354     361 ..     353     362 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4e-05
    Tail_VII 16 glVlvWFvLGrlAGsvAGmF 35
                g+V+  FvLG lAG +A m+
  KHJ34803.1 68 GIVVSSFVLGALAGCIACMY 87
                788889************97 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 3
    Tail_VII  12 ticiglVl 19 
                 ++ + lVl
  KHJ34803.1 354 MGSCMLVL 361
                 89999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.43
# Mc/sec: 3611.03
//
Query:       KHJ34804.1  [L=348]
Description: putative insig domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-68  230.9   0.1    1.6e-68  230.6   0.1    1.1  1  INSIG     Insulin-induced protein (INSIG)


Domain annotation for each model (and alignments):
>> INSIG  Insulin-induced protein (INSIG)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  230.6   0.1   8.7e-73   1.6e-68       1     212 []     110     343 ..     110     343 .. 0.85

  Alignments for each domain:
  == domain 1  score: 230.6 bits;  conditional E-value: 8.7e-73
       INSIG   1 lrallLfvlGvvygvlvtrlheerkl...lvkke.ksssswrylvfwGlagvalGlllpwlDrlweekfaeeeeee..........eeekeeekaasea 85 
                 +ra+lLf+ G++yg+l+++l+++  l    v++e +++ s  yl +wG++gva+G+l+p +D  ++ + +++++++          e++k ee++  ++
  KHJ34804.1 110 IRAILLFGTGICYGLLIQHLQDKPDLifhEVQNEtQHNISRLYLFLWGISGVAIGSLVPRVDASFSLHSTSSNKQNspkdsayalnENSKMEENNLLRQ 208
                 599*********************997764444457788889*********************887776666666689*******9999999999**** PP

       INSIG  86 dwalvvrsigafvGiafAirklpwastlqvsltlalvnpfLWyliDrskpGfllsaavgllgtavllglnpdlvpaPsaaa........saaaaaaaae 176
                 dw+ v+rs+gafvGiafA+rklpw+st q+sl+l lvnp+LWyl+Drsk+Gf+ls++vg lgt +l+ l+ + +  P+  +          ++ +++++
  KHJ34804.1 209 DWTPVIRSVGAFVGIAFALRKLPWSSTFQASLALSLVNPVLWYLVDRSKSGFFLSSVVGTLGTSILIILKSKKTVYPTLLSpirtyyiaF-THGETEKK 306
                 *****************************************************************8886333333566666666667641.33333333 PP

       INSIG 177 ealgg.asqeslevaiwllsvLFcscvcfGniGRrLa 212
                       +++e+le aiw+lsvLFcsc+cfGniGRrLa
  KHJ34804.1 307 LDGLNlIDKENLEDAIWILSVLFCSCICFGNIGRRLA 343
                 3333447899**************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (348 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 2939.11
//
Query:       KHJ34805.1  [L=578]
Description: putative chromosome segregation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0025   17.7   0.0      0.032   14.1   0.0    2.6  2  DUF4939         Domain of unknown function (DUF4939)
  ------ inclusion threshold ------
      0.018   15.1   0.3      0.037   14.1   0.3    1.6  1  zf-CCHC         Zinc knuckle
      0.042   13.9   1.8        2.7    8.1   0.9    2.8  3  Cauli_DNA-bind  Caulimovirus DNA-binding protein
      0.056   14.1  11.1       0.29   11.8   0.3    3.6  4  SlyX            SlyX
      0.099   12.4   6.1        0.6    9.9   0.0    3.2  3  DivIC           Septum formation initiator
       0.13   12.1   2.2        0.5   10.2   0.1    2.8  2  TRAF_BIRC3_bd   TNF receptor-associated factor BIRC3 binding 
        1.4    8.8  10.2       0.17   11.9   2.3    2.4  2  Suf             Suppressor of forked protein (Suf)
        2.6    8.3  10.7        6.6    7.0   0.5    3.2  4  DUF5082         Domain of unknown function (DUF5082)
        5.7    7.8  14.2       0.49   11.2   7.9    2.6  2  KIAA1430        KIAA1430 homologue
        5.9    7.4   7.3        6.5    7.3   0.5    3.4  3  DUF16           Protein of unknown function DUF16


Domain annotation for each model (and alignments):
>> DUF4939  Domain of unknown function (DUF4939)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.0   1.8e-05     0.032      43      80 ..     221     258 ..     184     274 .. 0.79
   2 ?   -0.3   0.0      0.54   9.6e+02      17      31 ..     441     455 ..     426     460 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 1.8e-05
     DUF4939  43 ivqtlsymlvdektfssdalkvtflitrltGealewvl 80 
                   q+   +lvde+ f sd  ++ f+ ++l+G+a + v 
  KHJ34805.1 221 KTQMEQILLVDEDCFPSDFHRISFVTSLLSGKAWDAVQ 258
                 5799999*************************987765 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.54
     DUF4939  17 rqkrrwrnpipfpet 31 
                 r ++r  npip p++
  KHJ34805.1 441 RDHHRKINPIPMPKR 455
                 5678999******86 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.3   2.1e-05     0.037       3      15 ..     430     442 ..     428     442 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.1e-05
                 TSSSSSSSSTTTT CS
     zf-CCHC   3 CynCGepGHiard 15 
                 C  CGe GH+ard
  KHJ34805.1 430 CIACGEKGHFARD 442
                 567*********9 PP

>> Cauli_DNA-bind  Caulimovirus DNA-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.9    0.0015       2.7       6      69 ..      81     144 ..      76     167 .. 0.75
   2 ?    3.2   0.0     0.048        86       9      70 ..     290     353 ..     282     359 .. 0.83
   3 ?   -2.1   0.0       2.1   3.8e+03      65      99 ..     374     406 ..     366     408 .. 0.62

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0015
                     HHHHHHHHHHHHHHHHHHHHHHHHHTS--HHHHHHHHHHHHHHHHHHHHHT-T.THHHHHHHHTX CS
  Cauli_DNA-bind   6 seieevlsdqkkieaeikaileklgstkpekesleevaakiikdltkkidece.cnkeiveildk 69 
                      ei+e+ s +++ +++i+ + + ++ +k + e+lee a   +  + +++++ +  n +i  +l++
      KHJ34805.1  81 GEISELDSGLTQARSQINDLCNTVSLNKRQIENLEESARNSMFLVQDRLKDINdLNSKIF-ALNT 144
                     69***********************************98866666666665541344444.4444 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.048
                     HHHHHHHHHHHHHHHHHHHHHHTS--HHHHHHHHHHHHHHHHHHHHH..T-TTHHHHHHHHTXX CS
  Cauli_DNA-bind   9 eevlsdqkkieaeikaileklgstkpekesleevaakiikdltkkid..ececnkeiveildkk 70 
                      ++l + ++ ++ ++++++      + k ++++ aak + d   k+d    + nk+i +++d++
      KHJ34805.1 290 YVLLDSTQSAKNALDTLFQDKRPYGDFKADFDHYAAKALYDDRTKVDllRKRLNKKITNVIDNQ 353
                     5788899999999*****9999999************99888777773256789****999986 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 2.1
                     HHHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Cauli_DNA-bind  65 eildkkqdkqiipskkedqkrlslvkysyPnydvG 99 
                       l++  ++ i + +++ +++ +      P +dvG
      KHJ34805.1 374 RNLQQ--QDHIAKLNQQPNHNRNVETPMQPAFDVG 406
                     44444..5556666666666677777778888888 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3   0.00016      0.29       8      55 ..      72     119 ..      66     128 .. 0.91
   2 ?    7.5   0.2    0.0035       6.3      10      55 ..     137     182 ..     129     193 .. 0.61
   3 ?   -3.4   0.0       8.5   1.5e+04      30      41 ..     332     343 ..     326     354 .. 0.59
   4 ?   -0.2   0.2      0.91   1.6e+03      28      39 ..     377     388 ..     374     402 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00016
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXX CS
        SlyX   8 LEiklafqedtieeLndvvaeqqqqidrlqrqlrllaerlkeleessg 55 
                 L +k+  qe  i eL+  +++ + qi  l   + l ++++++lees++
  KHJ34805.1  72 LNEKIISQEGEISELDSGLTQARSQINDLCNTVSLNKRQIENLEESAR 119
                 7789999*************************************9976 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0035
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXXX CS
        SlyX  10 iklafqedtieeLndvvaeqqqqidrlqrqlrllaerlkeleessg 55 
                 +k+  +  +    n+ va+ +++i rlq++  ll  r   +e++sg
  KHJ34805.1 137 SKIFALNTQHSLENERVAQLNDKIFRLQEENSLLLSRATRAENTSG 182
                 4444444444444677777777777777777777777766665554 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 8.5
                 HHHHHHHHHHHH CS
        SlyX  30 qqqidrlqrqlr 41 
                 + ++d l+++l+
  KHJ34805.1 332 RTKVDLLRKRLN 343
                 455555555544 PP

  == domain 4  score: -0.2 bits;  conditional E-value: 0.91
                 HHHHHHHHHHHH CS
        SlyX  28 eqqqqidrlqrq 39 
                 +qq+ i++l +q
  KHJ34805.1 377 QQQDHIAKLNQQ 388
                 455555555554 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00034       0.6      18      70 ..      75     127 ..      59     128 .. 0.92
   2 ?    3.9   0.5     0.026        47      23      48 ..     150     175 ..     129     183 .. 0.67
   3 ?   -1.2   0.2      0.97   1.7e+03      20      39 ..     376     388 ..     368     392 .. 0.56

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00034
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXXXXXXXXXXXXXXXXXXX CS
       DivIC  18 aykqlkqeiaalqaelaklkaeneeLeaevkdLksdedyieerARselglvkp 70 
                 ++ +++ ei +l   l + + ++++L   v++ k + + +ee AR+   lv++
  KHJ34805.1  75 KIISQEGEISELDSGLTQARSQINDLCNTVSLNKRQIENLEESARNSMFLVQD 127
                 578999***************************99***********9999876 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.026
                 HHHHHHHHHHHHHHHHHHHHHHHHHC CS
       DivIC  23 kqeiaalqaelaklkaeneeLeaevk 48 
                 ++ +a+l++++ +l++en  L ++  
  KHJ34805.1 150 NERVAQLNDKIFRLQEENSLLLSRAT 175
                 44567777777777777777766655 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.97
                 HHHHHHHHHHHHHHHHHHHH CS
       DivIC  20 kqlkqeiaalqaelaklkae 39 
                  q       +q+++akl+++
  KHJ34805.1 376 LQ-------QQDHIAKLNQQ 388
                 44.......45555555443 PP

>> TRAF_BIRC3_bd  TNF receptor-associated factor BIRC3 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.2      0.46   8.3e+02      20      60 ..      69     109 ..      60     120 .. 0.57
   2 ?   10.2   0.1   0.00028       0.5      25      59 ..     130     164 ..     129     169 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.46
  TRAF_BIRC3_bd  20 VsVLnrEverssttieaverqrrldqekieaLekKvrqLer 60 
                      VLn  + + + +i ++  +  +++  i+ L + v   +r
     KHJ34805.1  69 FGVLNEKIISQEGEISELDSGLTQARSQINDLCNTVSLNKR 109
                    55666666666666666666666666666655555543333 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00028
  TRAF_BIRC3_bd  25 rEverssttieaverqrrldqekieaLekKvrqLe 59 
                    + ++  +++i a++ q+ l+ e ++ L+ K+  L+
     KHJ34805.1 130 KDINDLNSKIFALNTQHSLENERVAQLNDKIFRLQ 164
                    67888999***********************8887 PP

>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   2.3   9.3e-05      0.17     113     245 ..      90     224 ..      51     237 .. 0.74
   2 ?    1.7   0.8      0.12   2.1e+02     149     257 ..     289     402 ..     282     501 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 9.3e-05
         Suf 113 fleyestfgdlssilklekRmeelfpedskleqfvdRYklknldpikkrelksetkqeeekallqkkeeqaaslees...kvpqaqeskkrklesedss 208
                   +  s+++dl ++++l+kR  e ++e +    f+   +lk+++  +++    +t++  e++ +++ +++   l+e+     ++a++ ++++ + ++++
  KHJ34805.1  90 LTQARSQINDLCNTVSLNKRQIENLEESARNSMFLVQDRLKDINDLNSKIFALNTQHSLENERVAQLNDKIFRLQEEnslLLSRATRAENTSGDIQNTP 188
                 5556799********************888888888888888888888888888777777777777777544444443344444555555555555555 PP

         Suf 209 .vkkPdklqmvespkkgaagrrleqqrksessksaeaa 245
                  ++kP+++ +   p+k  ag++++++r++e +  ++++
  KHJ34805.1 189 tYQKPRRSRSD--PEKFNAGQQSTEKRQMEYERWKTQM 224
                 68999988877..5677777777788877777666655 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.12
         Suf 149 RYklknldpikkrelksetkqeeekallqkkee....qaaslees.....kvpqaqeskkrklesedss.vkkPdklqmvespkkgaagrrleqqrkse 237
                 RY l +  + +k+ l+   + +++    ++  +    +a           kv    ++ + k+ +  ++ v+ P +  ++   + + ++ r+ qq+   
  KHJ34805.1 289 RYVLLDSTQSAKNALDTLFQDKRPYGDFKADFDhyaaKA-----LyddrtKVDLLRKRLNKKITNVIDNqVNLPGAEDFAGWSEMTNSIARNLQQQDHI 382
                 555555555555555555555544433333332222111.....1223346666666666777777666788999999988888888888888888887 PP

         Suf 238 ssksaeaasksqkalqqqpa 257
                 ++ +++++++ + +++ qpa
  KHJ34805.1 383 AKLNQQPNHNRNVETPMQPA 402
                 77777777777666666654 PP

>> DUF5082  Domain of unknown function (DUF5082)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.4   0.4    0.0058        10      13      56 ..      70     117 ..      65     124 .. 0.66
   2 ?    6.8   0.9    0.0044       7.9       7      51 ..      92     137 ..      86     151 .. 0.83
   3 ?    7.0   0.5    0.0037       6.6       2      52 ..     136     186 ..     135     192 .. 0.86
   4 ?   -3.3   0.1       5.9   1.1e+04      84      99 ..     333     348 ..     331     354 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.4 bits;  conditional E-value: 0.0058
     DUF5082  13 aelrseiaaleekIerLk....eaktklsdekeslkqkkkklekplns 56 
                 + l ++i + e  I++L     +a++++ d  ++++ +k+++e+ + s
  KHJ34805.1  70 GVLNEKIISQEGEISELDsgltQARSQINDLCNTVSLNKRQIENLEES 117
                 556666666667777766666677777777777777777777766655 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0044
     DUF5082   7 klqaqiaelrseiaaleekIerLk.eaktklsdekeslkqkkkkle 51 
                 ++++qi +l ++++ +  +Ie L+ +a+ ++  ++ +lk+ +   +
  KHJ34805.1  92 QARSQINDLCNTVSLNKRQIENLEeSARNSMFLVQDRLKDINDLNS 137
                 6899*******************9789****999999999775544 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0037
     DUF5082   2 ktkisklqaqiaelrseiaaleekIerLkeaktklsdekeslkqkkkklek 52 
                  +ki +l+ q +   +++a+l++kI rL+e  + l +   +++++  ++++
  KHJ34805.1 136 NSKIFALNTQHSLENERVAQLNDKIFRLQEENSLLLSRATRAENTSGDIQN 186
                 57888999999999999************9999998888888888887776 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 5.9
     DUF5082  84 dkldelidaieeEIer 99 
                 +k+d l ++++++I++
  KHJ34805.1 333 TKVDLLRKRLNKKITN 348
                 5788888888888887 PP

>> KIAA1430  KIAA1430 homologue
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   7.9   0.00027      0.49      21      93 ..     144     218 ..      90     221 .. 0.85
   2 ?   -2.0   0.4       3.5   6.2e+03      84      94 ..     376     386 ..     332     397 .. 0.49

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00027
    KIAA1430  21 shlskkkkklqleeerlkeiereNqiLleklseimrrkgk..kksassqsqksktaskslnaenrkkelqkIeeE 93 
                 +++s+++++ ++ ++++ + ++eN++Ll++ ++ ++++g   ++++++++++s + +++ na ++  e ++ e E
  KHJ34805.1 144 TQHSLENERVAQLNDKIFRLQEENSLLLSRATRAENTSGDiqNTPTYQKPRRSRSDPEKFNAGQQSTEKRQMEYE 218
                 23566667777778999999******************99999999******************99999998876 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 3.5
    KIAA1430  84 kkelqkIeeEN 94 
                  +++++I++ N
  KHJ34805.1 376 LQQQDHIAKLN 386
                 12222333322 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.5    0.0036       6.5      46      87 ..      65     117 ..      50     134 .. 0.62
   2 ?    2.3   0.4      0.13   2.3e+02      32      72 ..     128     168 ..     120     187 .. 0.79
   3 ?   -0.4   0.1       0.9   1.6e+03      28      58 ..     316     350 ..     299     394 .. 0.64

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0036
                 ..HHHHHHHHHHHHHHHHHHHHHHHHHHHHH..................HHHH CS
       DUF16  46 lgeqinkleqkvekqgekikelkveqkaqgeeln...........kvdetlel 87 
                  + q+ +l++k+  q+ +i+el     + + ++n           ++++  e+
  KHJ34805.1  65 FEYQFGVLNEKIISQEGEISELDSGLTQARSQINdlcntvslnkrQIENLEES 117
                 56677777888888888888888877777777775555444444333333333 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.13
                 BHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHH CS
       DUF16  32 nkqrLkkieakvdklgeqinkleqkvekqgekikelkveqk 72 
                   +++++++ k+ +l+ q +  ++ v ++++ki +l++e  
  KHJ34805.1 128 RLKDINDLNSKIFALNTQHSLENERVAQLNDKIFRLQEENS 168
                 45567777888888999999999999999999999988865 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.9
                 B-......BHHHHHHHHHHHH...HHHHHHHHHHH CS
       DUF16  28 fkds....nkqrLkkieakvdklgeqinkleqkve 58 
                 fk +      + L +  +kvd l +++nk   +v 
  KHJ34805.1 316 FKADfdhyAAKALYDDRTKVDLLRKRLNKKITNVI 350
                 55554444455666666666666666665443332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (578 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       962  (0.0536561); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.58u 0.29s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 4106.82
//
Query:       KHJ34806.1  [L=325]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       802  (0.044732); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2564.95
//
Query:       KHJ34807.1  [L=521]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.092   12.9   0.1       0.23   11.6   0.1    1.6  1  Tape_meas_lam_C  Lambda phage tail tape-measure protein (Tape


Domain annotation for each model (and alignments):
>> Tape_meas_lam_C  Lambda phage tail tape-measure protein (Tape_meas_lam_C)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.1   1.3e-05      0.23      26      53 ..      90     117 ..      83     134 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 1.3e-05
  Tape_meas_lam_C  26 aeaatsafdsmedalaefvttGklsfsd 53 
                       +++t+a++  ed+l+ ++t+G  sf d
       KHJ34807.1  90 IQIFTTAINAVEDSLSPMLTGGNKSFLD 117
                      589********************99966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (521 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       665  (0.0370907); expected 358.6 (0.02)
Passed bias filter:                      434  (0.0242066); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3772.83
//
Query:       KHJ34808.1  [L=301]
Description: hypothetical protein EV44_g1965 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       716  (0.0399353); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2129.71
//
Query:       KHJ34809.1  [L=850]
Description: putative eukaryotic translation initiation factor 3 subunit c [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.1e-173  578.8  21.8   1.7e-140  469.2   1.8    3.0  3  eIF-3c_N         Eukaryotic translation initiation factor 3 s
    1.5e-13   51.1   0.6    8.8e-13   48.7   0.1    2.7  2  PCI              PCI domain
     0.0095   16.4   1.2        5.7    7.4   0.0    3.6  3  DUF2779          Domain of unknown function(DUF2779)
  ------ inclusion threshold ------
       0.15   12.0   0.3        1.1    9.2   0.1    2.4  2  DASH_Ask1        DASH complex subunit Ask1
       0.41    8.8  16.3       0.67    8.1  16.3    1.3  1  Nop14            Nop14-like family
       0.94    7.7  13.0        1.4    7.1  13.0    1.2  1  CDC45            CDC45-like protein


Domain annotation for each model (and alignments):
>> eIF-3c_N  Eukaryotic translation initiation factor 3 subunit 8 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.0   7.7       2.2   6.5e+03     137     168 ..      23      54 ..      14      65 .. 0.61
   2 !  124.0  12.4     2e-39   5.9e-36       5     150 ..      61     204 ..      55     210 .. 0.91
   3 !  469.2   1.8  5.7e-144  1.7e-140     209     589 ..     235     621 ..     228     624 .. 0.96

  Alignments for each domain:
  == domain 1  score: -5.0 bits;  conditional E-value: 2.2
                 XXXXXXXXXXXXXXXXXXXXX........... CS
    eIF-3c_N 137 eeeeeeeedededdegedeededeksvkatea 168
                 +eeeee+e ++e +++ed+++ede++vk+t a
  KHJ34809.1  23 SEEEEENESDAEGSSDEDSSSEDEDGVKKTGA 54 
                 34555556666666666667777777777654 PP

  == domain 2  score: 124.0 bits;  conditional E-value: 2e-39
                 -TT---S--S-S-----SSGGGGTTTS-SSTTTTTTT---SSSHHHHHHHHHHH-HHHHHH..HH--S--XXXXXXXXXXXXXXXXX....XX.XXXXX CS
    eIF-3c_N   5 kesseessdeedtkrVVksaKdKrfeeltsiiktiknakkikdlvklleeFdklnkalekaksqkenvktPrlyikvlaeledflnelwedke.akkkl 102
                 ++s++e s +ed  +VVksaKdKr eel+s+ik i n +ki+d+  ++ eFdkln+++ k     ++++tP++y+k++aeledf+ne ++ ++    k+
  KHJ34809.1  61 ADSESEDSSDEDRAKVVKSAKDKRQEELESTIKAIENGQKINDWGAISIEFDKLNRQVAK---LIQAGNTPKIYVKTIAELEDFMNETIAKQKvSTRKM 156
                 5778888999**************************************************...5689********************88765516789* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    eIF-3c_N 103 sknnakalntlrQkvkKynkqfeddikkyredPeeeeeeeeedededd 150
                 ++ na+ +n+++Q++kK +k+f+ di+++r+d + ++e e+e+   + 
  KHJ34809.1 157 NATNARGFNAVKQRIKKISKEFQADIESFRSDQDAFMESEDEEIVLKT 204
                 **************************************9999876655 PP

  == domain 3  score: 469.2 bits;  conditional E-value: 5.7e-144
                 XXXXHHHHHHHHHHHHHHTSSSXXHHHHHHHHHHHHHHXSTCCHHHHHHHHHHHHHHHHCCHTSSSXXHHHHHHHHHHHHHHHHHHHHCTTGCCXTTTX CS
    eIF-3c_N 209 eitvevvikklkeilsaRgkkttdrseqielleeLlkiaeekelkvkikfsiisarfdvnaklseymkievwkkaleeinslldilvananivvseeva 307
                 + t e ++k+l++i+++Rgkk+tdr+eqi+ +e+L ++a+++++++++ +++is+rfd+ ++   +m  e+wk+a +e ++ll+il  n++ +v+++ +
  KHJ34809.1 235 QFTPESILKHLRTIMESRGKKNTDRNEQIKIMEKLYDVATTPYQRIRVLLTLISTRFDLTTGAQVFMAQEQWKSAEREFTNLLKILESNPEFIVVDDAE 333
                 678999*************************************************************************************99966654 PP

                 SSSXTTTTTTXXXXXXCCCCCSHHHHHHHHHHHHHHHHHHHSXTTSHHHHHHHHHHHHHHHHHHHHHHHHHHCXXT.......CHHHHHHHHHHHTTTT CS
    eIF-3c_N 308 deseeledetkedadgvirvrGsilafverlddEfvkslqniDpHsndYverLkdEksllaliervqkYlErtgds.......kevarvylrriehiYY 399
                    +++e+++  ++  ++++ Gs++a+verlddE+++slq+iDpH+++Y++rL dE+sl++ i r+  Y E +g +         + r+++rr+ehiY+
  KHJ34809.1 334 G-WDDDEKHPVIQEGVKFKIPGSVVAYVERLDDELTRSLQQIDPHTSEYIDRLSDEASLYNNIVRTLLYTEGSGMDvnpqvfqDSLNRIVMRRLEHIYF 431
                 4.444455666678899*********************************************************999999999999************* PP

                 SXHHHHHHHHHHCHHCHHSXSSXHHCCTTXTTHHHHHHHHHHHHCTTSSXHHHHHHHHHHHHHHHHHHSXHHHHHHHHHHHXXSHHHHCSSSCHHHHHH CS
    eIF-3c_N 400 KfeevieaeeeslissfikvkekskekeataessdalmdkLckliykddeerirtrAiLchiyhhAlhdnfvkArDllLmShlQdniqhaDistqiLyN 498
                 K+  v+++ ee+ ++s  k+ + +   ++   ++ +l++ Lc++++ + e+ +r+rA+Lc+iy+ Alhdn++kArD++LmShlQ++i+ +D++ qiL+N
  KHJ34809.1 432 KPSIVVKILEENCWKSIPKTLNSKIIPRDANYDAVTLVNVLCNYLFSKSENILRARAMLCQIYFYALHDNYYKARDMMLMSHLQESINGFDVQSQILFN 530
                 *************************************************************************************************** PP

                 HHHHHHHHHHHHTTXHHHHHHHHHHHHTXTTHHHHTTXXXHHHHHHHHXSHHHHHHHHTTXXCCCXXXHHHHHHHHHHHHHHHHHHHHHHH CS
    eIF-3c_N 499 RtmvqlGlcAFrqglikeahqaLsdllstgrvkElLgQgvlqrrqhektaeqekierrrqlPyHmhiNleLlecVyLvcamLlEiPamaaa 589
                 Rt+vq+GlcAFr+gli++a+ +L+++  +gr kElL+Qgv+ +r+++ ++eqe++er+rqlP+HmhiNleLlecVyL+c+mLlEiP +a a
  KHJ34809.1 531 RTLVQVGLCAFRAGLIHDAQLTLQEICGSGRQKELLAQGVMIQRYNQVSPEQERLERQRQLPFHMHINLELLECVYLTCSMLLEIPLLAQA 621
                 **************************************************************************************99965 PP

>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1       1.5   4.5e+03      44      63 ..     263     282 ..     240     317 .. 0.76
   2 !   48.7   0.1   2.9e-16   8.8e-13       2     105 .]     635     764 ..     634     764 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.5
                 HHHHHHHHHHHHHCESEEEH CS
         PCI  44 kkvrerllrqvskiyssisl 63 
                  k+ e+l+   + +y++i++
  KHJ34809.1 263 IKIMEKLYDVATTPYQRIRV 282
                 56777888777779999985 PP

  == domain 2  score: 48.7 bits;  conditional E-value: 2.9e-16
                 HHHHHHHHHHHTSHHHHHHHHHHH......................HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH....CESEEEHHHHHHHHTSSH CS
         PCI   2 sysdllkalrsgnlsgfseelkdl......................eeelladdglaqllesLekkvrerllrqvsk....iyssislerlaklldlsv 74 
                 +y+++l+  +++ ++g++e+ +d+                       + +   ++ + + ++L +k++ + lr++ +    +y ++s++ l+ +++ls+
  KHJ34809.1 635 TYRRMLEYHERQIFTGPPENTRDHvmqaskalaagewskavkfihsIKIWELMPKPESINSMLLEKIQVEGLRTYLFtyapYYDTLSISALSAMFELSE 733
                 688999999999999999999999888888888666666555544433444444444499************88888********************** PP

                 HHHHHHHHHHHHTTSSSEEEETTTTEEEECS CS
         PCI  75 devEkilvklIrdgeirakidqesgivvfkk 105
                  +v  i++k+I+++e++a +dq+s  ++f+k
  KHJ34809.1 734 TKVSAIISKMISHEELAAALDQVSSSIIFRK 764
                 **************************99976 PP

>> DUF2779  Domain of unknown function(DUF2779)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.3      0.29   8.7e+02      49      86 ..      79     146 ..      57     189 .. 0.50
   2 ?    4.5   0.0     0.015        46      18     101 ..     274     386 ..     269     406 .. 0.81
   3 !    7.4   0.0    0.0019       5.7      57     106 ..     745     794 ..     697     805 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.29
     DUF2779  49 pntdpreelieeLikiieke..............................gsvvvynksfEksrlkel 86 
                 + +d+r+e +e+ ik+ie+                               + +v   ++ E  + + +
  KHJ34809.1  79 SAKDKRQEELESTIKAIENGqkindwgaisiefdklnrqvakliqagntpKIYVKTIAELEDFMNETI 146
                 35677777777777777766223333222222222222222222222222333333344444444443 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.015
     DUF2779  18 tkpYqqipfqfSlhilqeegevehk.eflaespntdpreelieeLikiieke..............................gsvvvynksfEksrlke 85 
                 t pYq+i +   l i ++ + ++ +  f+a++ + +  e    +L+ki+e++                              gsvv+y +    +  ++
  KHJ34809.1 274 TTPYQRIRVLLTL-ISTRFDLTTGAqVFMAQE-QWKSAEREFTNLLKILESNpefivvddaegwdddekhpviqegvkfkipGSVVAYVERLDDELTRS 370
                 6799999999999.766655555551566666.55666666679*****99999************************************999999999 PP

     DUF2779  86 laqlfpeykeelkqii 101
                 l q+ p+ +e ++++ 
  KHJ34809.1 371 LQQIDPHTSEYIDRLS 386
                 9999888887776655 PP

  == domain 3  score: 7.4 bits;  conditional E-value: 0.0019
     DUF2779  57 lieeLikiiekegsvvvynksfEksrlkelaqlfpeykeelkqiienlvD 106
                   eeL+ ++++  s +++ k  E srl++la ++++++  l + +e+++ 
  KHJ34809.1 745 SHEELAAALDQVSSSIIFRKGVELSRLQSLALTLADKASGLIESNERTLE 794
                 568999999999*******************9999999999999998875 PP

>> DASH_Ask1  DASH complex subunit Ask1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.1   0.00036       1.1       1      23 [.     360     382 ..     360     388 .. 0.82
   2 ?   -0.7   0.0      0.46   1.4e+03      24      40 ..     450     466 ..     442     469 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00036
   DASH_Ask1   1 leqldqeitltLqeIDanlsrcf 23 
                 +e+ld e+t  Lq+ID   s+  
  KHJ34809.1 360 VERLDDELTRSLQQIDPHTSEYI 382
                 59**************8776655 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.46
   DASH_Ask1  24 riitkkilPavkrYgea 40 
                 +++++ki+P+ ++Y ++
  KHJ34809.1 450 KTLNSKIIPRDANYDAV 466
                 6789*****99999875 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1  16.3   0.00022      0.67     364     534 ..      13     179 ..       3     206 .. 0.51

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00022
       Nop14 364 seseeeeeeeeedeeeeedeeeeeeeeededdlsdleseeeeeedeleeel......leeekkaaeekkekk..kkkkkseekakeelpytfpcPeshe 454
                 s+s     ++eed  +ee+ee+e+    d + +sd++s ++e+ed ++++           ++++e++++++  k  k++++k++eel  t+++ e+ +
  KHJ34809.1  13 SSS-----SDEEDLYSEEEEENES----DAEGSSDEDS-SSEDEDGVKKTGanrfmrD--ADSESEDSSDEDraKVVKSAKDKRQEELESTIKAIENGQ 99 
                 111.....1111111111111111....1111111111.1111111111112222211..111111111111224556666667788888888888888 PP

       Nop14 455 ellellekreisaedlp.tvvqRIralhhpsLaeeNKeklqkflavLlqhiaylasqeeappfailesLvrhlhsLaksfp 534
                 + +++    +i+ ++l+  v + I+a + p++  +  + l++f++  +   +  +++ +a++ + ++ + + + +++k+f 
  KHJ34809.1 100 KINDWGAI-SIEFDKLNrQVAKLIQAGNTPKIYVKTIAELEDFMNETIAKQKVSTRKMNATNARGFNAVKQRIKKISKEFQ 179
                 88888774.477666652566667777888888877777777777766666666666665556666666666666666665 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1  13.0   0.00046       1.4     129     205 ..      13      87 ..       4     188 .. 0.63

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.00046
       CDC45 129 eeesdeedeeeeeeddddeeeeeeeeedeedeeedeeeskkkrksksdeeeesddddersrkrrrsepsakklrrql 205
                  + sdeed  +eee+++++++e +++ed+++e+ed+ +++  ++  +d+++e  ++d++ + r +  +sak +r+++
  KHJ34809.1  13 SSSSDEEDLYSEEEEENESDAEGSSDEDSSSEDEDGVKKTGANRFMRDADSE--SEDSSDEDRAKVVKSAKDKRQEE 87 
                 2233333335555555555555555555555555555544444423333322..22223333333332222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (850 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1804  (0.100619); expected 358.6 (0.02)
Passed bias filter:                      776  (0.0432818); expected 358.6 (0.02)
Passed Vit filter:                        91  (0.00507558); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.90u 0.34s 00:00:01.24 Elapsed: 00:00:00.49
# Mc/sec: 5209.49
//
Query:       KHJ34810.1  [L=275]
Description: hypothetical protein EV44_g1316 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.098   12.8   0.0       0.66   10.2   0.0    2.1  2  RNase_H   RNase H


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.0   3.7e-05      0.66       3      32 ..      89     118 ..      87     135 .. 0.71
   2 ?    0.0   0.0     0.048   8.7e+02      51      80 ..     170     197 ..     161     230 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 3.7e-05
                 SEEEEEEEEEECTTTCE.EEEE.EECTT..EE CS
     RNase_H   3 avvvYtDGsclgnpgeg.gaga.vlykegarn 32 
                 +++v+tDGs  +n+  + ++g+ ++  +  +n
  KHJ34810.1  89 KLMVFTDGSFAKNTDMSsQIGYiIMLMN--EN 118
                 689**********65554****544333..33 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.048
                 HHHHHHTT.SCSEEEEEES-HHHHHHHHCC CS
     RNase_H  51 vieaLkalksdekvniytDSkYvvkgitqw 80 
                 ++++L+   ++  ++i tDS  +++ +t+ 
  KHJ34810.1 170 ITKSLRL--KPIPLVICTDSFSLYQCLTKL 197
                 3444443..456788999998888877764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       378  (0.0210832); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.19s 00:00:00.63 Elapsed: 00:00:00.35
# Mc/sec: 2321.38
//
Query:       KHJ34811.1  [L=246]
Description: putative ribonuclease mrp protein subunit rmp1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (246 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1383  (0.0771376); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.19s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1962.74
//
Query:       KHJ34812.1  [L=296]
Description: putative abc transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.3e-14   54.1   0.2    2.2e-13   50.9   0.2    2.1  1  ABC_tran     ABC transporter
    1.3e-09   38.3   3.3    0.00054   19.9   0.6    2.2  2  AAA_21       AAA domain, putative AbiEii toxin, Type IV TA sy
    0.00016   21.2   0.1       0.16   11.4   0.0    2.2  2  SMC_N        RecF/RecN/SMC N terminal domain
     0.0021   17.7   0.2     0.0053   16.5   0.2    1.6  1  AAA_29       P-loop containing region of AAA domain
     0.0085   13.7   0.2      0.011   13.3   0.2    1.0  1  DUF3584      Protein of unknown function (DUF3584)
  ------ inclusion threshold ------
       0.01   15.8   0.2      0.019   14.9   0.2    1.4  1  RsgA_GTPase  RsgA GTPase
      0.011   16.2   0.0      0.021   15.4   0.0    1.3  1  AAA_23       AAA domain
      0.014   15.1   0.1      0.021   14.6   0.1    1.2  1  AAA_15       AAA ATPase domain
      0.066   12.7   0.3       0.18   11.3   0.0    1.7  2  Arf          ADP-ribosylation factor family
       0.11   12.8   0.2       0.18   12.1   0.2    1.4  1  AAA_28       AAA domain
       0.16   11.6   0.1       0.32   10.6   0.1    1.5  1  AAA_25       AAA domain
       0.33   10.7   0.0       0.33   10.7   0.0    1.9  2  PduV-EutP    Ethanolamine utilisation - propanediol utilisati


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.9   0.2   1.5e-16   2.2e-13       2     136 ..      42     177 ..      41     178 .. 0.73

  Alignments for each domain:
  == domain 1  score: 50.9 bits;  conditional E-value: 1.5e-16
                 EEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS....--S-TTSBHHHH......HHHTCHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxx......xxxxxxxxxxx RF
    ABC_tran   2 knvslklkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqe....pqlfpeltvren......esdeeiekals 90 
                 +nvsl+l   +++ ++G nGaGK+t+l+ll+g+     G i + g d  +       + + +l  e    p +  ++ vre       +       + +
  KHJ34812.1  42 HNVSLSLPSRSRTLLIGANGAGKTTVLRLLSGKRMAPLGAISVGGLDPFK----DGLEGVTYLGLEwvlnPIVRTDIGVRELlqsvggD-----VYVER 131
                 89***************************************999665555....45556666666622113444444455555433331.....22333 PP

                 HSTTGGTTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  91 klglkelkdtvvksspssLSgGqkqrvalarallkkpkllllDEpt 136
                 k +l+++ d  ++ +++ +S G+++rv+la+ l++  k+lllDE t
  KHJ34812.1 132 KNQLVQVLDIDLDWRMHAVSDGERRRVQLAMGLIRPWKFLLLDEIT 177
                 44455555555666669***************************87 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.6   3.6e-07   0.00054       2      21 ..      54      73 ..      53      94 .. 0.89
   2 !   18.6   0.1   8.7e-07    0.0013     230     297 ..     143     208 ..     128     213 .. 0.93

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 3.6e-07
      AAA_21  2 nvliGpNgsGKSnLLdaldl 21
                ++liG+Ng+GK+++L++l++
  KHJ34812.1 54 TLLIGANGAGKTTVLRLLSG 73
                79***************975 PP

  == domain 2  score: 18.6 bits;  conditional E-value: 8.7e-07
      AAA_21 230 qelparelSdGtkrllalltallralkkgsllliDEpEngLHPkllrrllellkelsr.ngaQviltTH 297
                  ++ ++ +SdG +r   l+  l+r     ++ll+DE+   L+    + +l +lk++++ ++  ++ +TH
  KHJ34812.1 143 LDWRMHAVSDGERRRVQLAMGLIRPW---KFLLLDEITVDLDLLSRSNFLSFLKSETElRDCTIVYATH 208
                 5678999*****************88...99**********************999999********** PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.8   0.0    0.0013         2      23      41 ..      50      68 ..      41      72 .. 0.84
   2 !   11.4   0.0   0.00011      0.16     144     189 ..     157     198 ..     126     224 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0013
                TSSEEEEEESTTSSHHHHH CS
                xxxxxxxxxxxxxxxxxxx RF
       SMC_N 23 sksftaivGpNGSGKsnll 41
                s+s t ++G+NG+GK+ +l
  KHJ34812.1 50 SRSRTLLIGANGAGKTTVL 68
                567899**********987 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00011
                 HHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 144 LvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkekskn 189
                  v     +A+  ++p  + llDei   LD   ++++ ++lk++++ 
  KHJ34812.1 157 RVQ----LAMGLIRPWKFLLLDEITVDLDLLSRSNFLSFLKSETEL 198
                 444....4566799***************************98864 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.2   3.6e-06    0.0053      14      39 ..      43      68 ..      37      77 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 3.6e-06
      AAA_29 14 ghtieidlkgatlltGpsGsGKSTll 39
                + ++++  ++ tll+G++G+GK+T+l
  KHJ34812.1 43 NVSLSLPSRSRTLLIGANGAGKTTVL 68
                45555655668*************97 PP

>> DUF3584  Protein of unknown function (DUF3584)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.2   7.4e-06     0.011      16      37 ..      50      71 ..      45      72 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 7.4e-06
     DUF3584 16 ldghtnieGtNaaGKTtLlrLi 37
                 + +t + G+N+aGKTt+lrL+
  KHJ34812.1 50 SRSRTLLIGANGAGKTTVLRLL 71
                5789*****************7 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.2   1.3e-05     0.019      74     131 ..      23      83 ..       6      86 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.3e-05
                  HTTSEEEE--..TTTHTTHHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S--- CS
  RsgA_GTPase  74 algyevllvs..aktkegleelkellkd.ktsvlvGqSGvGKStLinallpelelktgevs 131
                   l y++++ +  a+t++g+++++  l + + ++l+G  G+GK+t++  l ++  +  g++s
   KHJ34812.1  23 GLSYTFTTSNqtATTTAGIHNVSLSLPSrSRTLLIGANGAGKTTVLRLLSGKRMAPLGAIS 83 
                  555555544411456789999999999878999*****************99888888877 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.0   1.4e-05     0.021      18      38 ..      50      70 ..      39      72 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.4e-05
      AAA_23 18 skgltlItGpNGaGKTTildA 38
                s+  tl++G NGaGKTT+l+ 
  KHJ34812.1 50 SRSRTLLIGANGAGKTTVLRL 70
                55669*************986 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.1   1.4e-05     0.021      25      43 ..      53      71 ..      40      74 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.4e-05
      AAA_15 25 ltvliGkNnsGKSsileal 43
                 t+liG+N++GK+++l++l
  KHJ34812.1 53 RTLLIGANGAGKTTVLRLL 71
                69**************998 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00012      0.18      14      39 ..      51      76 ..      41      84 .. 0.85
   2 ?   -2.3   0.1       1.8   2.6e+03      64      98 ..     113     148 ..     108     152 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00012
                EEEEEEEESTTSSHHHHHHHHHHSSC CS
         Arf 14 elrilllGLDnaGKtTilkklkleel 39
                  r ll+G  +aGKtT+l  l+ +++
  KHJ34812.1 51 RSRTLLIGANGAGKTTVLRLLSGKRM 76
                5799**************99988776 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 1.8
                 EE-SSGGGGGGG.GGGCTTESEEEEEEETT-CTTHH CS
         Arf  64 DvGGqeklRplW.knYfektdavifvvDsadreRle 98 
                 D+G +e l ++  + Y e+ + ++ v+D     R++
  KHJ34812.1 113 DIGVRELLQSVGgDVYVERKNQLVQVLDIDLDWRMH 148
                 555555555553156888999999999988888886 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.2   0.00012      0.18       3      21 ..      55      73 ..      53      84 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00012
      AAA_28  3 vitGgestGKTtlleaLaa 21
                 ++G+ ++GKTt+l+ L+ 
  KHJ34812.1 55 LLIGANGAGKTTVLRLLSG 73
                79**************984 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.1   0.00021      0.32      30      52 ..      48      70 ..      29     103 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00021
      AAA_25 30 lpagelallaGapgtGKttlald 52
                lp  + +ll+Ga g+GKtt++  
  KHJ34812.1 48 LPSRSRTLLIGANGAGKTTVLRL 70
                78999**************9865 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.5       1.7   2.6e+03      11      33 ..       9      31 ..       5      39 .. 0.78
   2 ?   10.7   0.0   0.00022      0.33       2      26 ..      52      76 ..      51      78 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.7
   PduV-EutP 11 gsGKttLtqalkgeelkYkktqa 33
                +  K tLt +++ + l+Y+ t +
  KHJ34812.1  9 QDQKVTLTPSIEIKGLSYTFTTS 31
                55699999999999999998865 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00022
   PduV-EutP  2 kkilliGkvgsGKttLtqalkgeel 26
                ++ lliG+ g+GKtt+ + l+g+++
  KHJ34812.1 52 SRTLLIGANGAGKTTVLRLLSGKRM 76
                5889****************99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        86  (0.0047967); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2176.39
//
Query:       KHJ34813.1  [L=522]
Description: putative zinc finger protein ozf [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.9e-18   63.8  19.2    0.00025   21.3   1.0    4.7  4  zf-C2H2        Zinc finger, C2H2 type
    1.3e-14   53.9  20.8    2.6e-08   33.9   1.0    4.9  5  zf-H2C2_2      Zinc-finger double domain
    5.2e-10   39.3  16.7      0.052   14.4   0.6    4.7  4  zf-C2H2_4      C2H2-type zinc finger
    0.00016   21.9   6.4     0.0034   17.6   0.9    3.2  3  zf-C2H2_8      C2H2-type zinc ribbon
     0.0003   21.0   4.1       0.84    9.8   0.1    3.3  3  zf-C2H2_aberr  Aberrant zinc-finger
    0.00082   19.7   4.8        1.1    9.8   0.0    4.4  4  zf-met         Zinc-finger of C2H2 type
  ------ inclusion threshold ------
       0.02   15.1   3.0        0.4   10.9   0.2    2.7  2  C1_4           TFIIH C1-like domain
      0.078   12.9   4.2        3.4    7.7   0.2    3.6  3  zf-LYAR        LYAR-type C2HC zinc finger
       0.74    9.9   9.5         10    6.3   0.1    3.7  3  zf-C2H2_6      C2H2-type zinc finger
       0.92    9.5   4.5        6.7    6.7   0.8    2.8  2  zf-C2HC_2      zinc-finger of a C2HC-type
        1.6    8.9   6.3        8.8    6.5   2.6    3.2  3  Zn-ribbon_8    Zinc ribbon domain
        1.7    8.4   4.5        1.7    8.5   0.1    2.7  3  zf-C2H2_11     zinc-finger C2H2-type


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   1.2   1.7e-05     0.025       1      23 []     257     281 ..     257     281 .. 0.97
   2 !   21.3   1.0   1.7e-07   0.00025       1      23 []     287     311 ..     287     311 .. 0.98
   3 !   19.9   0.2   4.8e-07   0.00071       1      23 []     317     339 ..     317     339 .. 0.97
   4 !   18.7   0.3   1.1e-06    0.0017       5      23 .]     351     370 ..     345     370 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.7e-05
                 EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                 y+C+  +C+ksF +k +L  H r H
  KHJ34813.1 257 YQCTieGCTKSFFQKTHLDIHERAH 281
                 9********************9998 PP

  == domain 2  score: 21.3 bits;  conditional E-value: 1.7e-07
                 EEET..TTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                 y C+  +C+++F++  nLk+H r+H
  KHJ34813.1 287 YSCKqpGCNRTFSQLGNLKTHERRH 311
                 89**********************9 PP

  == domain 3  score: 19.9 bits;  conditional E-value: 4.8e-07
                 EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                 y+C+ Cgk+F ++ n ++H+ +H
  KHJ34813.1 317 YQCETCGKRFAQRGNVRAHRIVH 339
                 9*******************998 PP

  == domain 4  score: 18.7 bits;  conditional E-value: 1.1e-06
                 TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   5 dCgksFkrksnLkrHirt.H 23 
                 dCgk F++  nLk+H+++ H
  KHJ34813.1 351 DCGKQFTQLGNLKSHQNKfH 370
                 9****************999 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.7     0.085   1.3e+02      11      24 ..     253     268 ..     250     270 .. 0.86
   2 !   15.2   0.6   1.5e-05     0.022       2      25 ..     274     299 ..     273     300 .. 0.88
   3 !   33.9   1.0   1.7e-11   2.6e-08       1      25 [.     303     327 ..     303     328 .. 0.96
   4 !   13.9   0.0   3.7e-05     0.055       1      25 [.     331     357 ..     331     358 .. 0.92
   5 ?   -2.3   0.1       5.1   7.6e+03       1       9 [.     361     370 ..     361     372 .. 0.71

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.085
   zf-H2C2_2  11 gekpyeCp..lCdkaF 24 
                 ++k+y+C    C k+F
  KHJ34813.1 253 SKKRYQCTieGCTKSF 268
                 6899****977**999 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 1.5e-05
   zf-H2C2_2   2 LrrHirkHtgekpyeCp..lCdkaFk 25 
                 L  H r Htg kpy C+   C+ +F+
  KHJ34813.1 274 LDIHERAHTGVKPYSCKqpGCNRTFS 299
                 66799************888****97 PP

  == domain 3  score: 33.9 bits;  conditional E-value: 1.7e-11
   zf-H2C2_2   1 nLrrHirkHtgekpyeCplCdkaFk 25 
                 nL+ H r Htge+py+C+ C+k+F+
  KHJ34813.1 303 NLKTHERRHTGERPYQCETCGKRFA 327
                 89**********************8 PP

  == domain 4  score: 13.9 bits;  conditional E-value: 3.7e-05
   zf-H2C2_2   1 nLrrHirkHtgekpyeCp..lCdkaFk 25 
                 n r H  +H + kpy C    C+k F+
  KHJ34813.1 331 NVRAHRIVHDQAKPYVCIldDCGKQFT 357
                 5789**************999*****8 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 5.1
   zf-H2C2_2   1 nLrrHirk.H 9  
                 nL+ H+ k H
  KHJ34813.1 361 NLKSHQNKfH 370
                 7999986547 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.9   0.00022      0.32       1      23 [.     257     281 ..     257     282 .. 0.96
   2 !   14.4   0.6   3.5e-05     0.052       1      23 [.     287     311 ..     287     312 .. 0.94
   3 !   13.0   0.1   9.6e-05      0.14       1      23 [.     317     339 ..     317     340 .. 0.94
   4 !    9.3   0.2    0.0015       2.3       1      24 []     345     370 ..     345     370 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00022
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkth 23 
                 ++C+i  C+ksF  k++L  H ++h
  KHJ34813.1 257 YQCTIegCTKSFFQKTHLDIHERAH 281
                 89*********************99 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 3.5e-05
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkth 23 
                 + C++  C+++Fs   +L++H ++h
  KHJ34813.1 287 YSCKQpgCNRTFSQLGNLKTHERRH 311
                 7899999*****************9 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 9.6e-05
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkth 23 
                 ++C+ Cgk+F  + +++ H   h
  KHJ34813.1 317 YQCETCGKRFAQRGNVRAHRIVH 339
                 89*****************9877 PP

  == domain 4  score: 9.3 bits;  conditional E-value: 0.0015
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkthH 24 
                 + C +  Cgk F+   +L++H ++ H
  KHJ34813.1 345 YVCILddCGKQFTQLGNLKSHQNKFH 370
                 5676777**************99988 PP

>> zf-C2H2_8  C2H2-type zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.3    0.0038       5.7      27      61 ..     248     282 ..     224     287 .. 0.76
   2 !   17.6   0.9   2.3e-06    0.0034      31      85 ..     282     335 ..     270     344 .. 0.74
   3 ?   -0.1   0.0      0.77   1.2e+03      32      61 ..     341     371 ..     332     379 .. 0.80

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0038
   zf-C2H2_8  27 ptqslegklfrcstascaetfpsmqelvahtklhy 61 
                   +s   k+++c+   c+++f     l  h + h 
  KHJ34813.1 248 AGRSKSKKRYQCTIEGCTKSFFQKTHLDIHERAHT 282
                 3378999***************9999999998885 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 2.3e-06
   zf-C2H2_8  31 legklfrcstascaetfpsmqelvahtklhykpnryfkcencllrfrthrslfkh 85 
                 +  k + c  + c  tf  + +l +h + h   +r ++ce c  rf     +  h
  KHJ34813.1 282 TGVKPYSCKQPGCNRTFSQLGNLKTHERRHT-GERPYQCETCGKRFAQRGNVRAH 335
                 3348899*********************996.68999*********765554444 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.77
   zf-C2H2_8  32 egklfrcstascaetfpsmqelvaht.klhy 61 
                 + k + c    c + f  + +l +h  k+h 
  KHJ34813.1 341 QAKPYVCILDDCGKQFTQLGNLKSHQnKFHI 371
                 56889999999******99999999526665 PP

>> zf-C2H2_aberr  Aberrant zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.2     0.028        42     135     156 ..     251     272 ..     241     282 .. 0.75
   2 !    6.6   0.1    0.0051       7.7     141     164 ..     287     310 ..     271     314 .. 0.84
   3 !    9.8   0.1   0.00056      0.84     131     167 ..     337     371 ..     330     380 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.028
  zf-C2H2_aberr 135 idkkdliyCripGCgkrfkslm 156
                    ++ k+ + C i+GC k+f + +
     KHJ34813.1 251 SKSKKRYQCTIEGCTKSFFQKT 272
                    55666789*********97655 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0051
  zf-C2H2_aberr 141 iyCripGCgkrfkslmaYkYhckk 164
                    ++C+ pGC++ f +l   k h ++
     KHJ34813.1 287 YSCKQPGCNRTFSQLGNLKTHERR 310
                    68*************999999665 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00056
  zf-C2H2_aberr 131 kiiDidkkdliyCripGCgkrfkslmaYkYhckkflh 167
                     ++D  k+  + C +  Cgk+f +l   k h +kf+ 
     KHJ34813.1 337 IVHDQAKP--YVCILDDCGKQFTQLGNLKSHQNKFHI 371
                    56666666..89********************99964 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.2       1.5   2.3e+03       6      21 ..     264     279 ..     262     282 .. 0.86
   2 ?    4.5   0.0     0.033        50       6      21 ..     294     309 ..     293     309 .. 0.94
   3 !    9.8   0.0   0.00072       1.1       1      19 [.     317     335 ..     317     336 .. 0.96
   4 ?    4.0   0.1     0.048        72       6      21 ..     352     367 ..     350     367 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.5
      zf-met   6 CnvtfnsesqlksHlq 21 
                 C ++f  +++l+ H +
  KHJ34813.1 264 CTKSFFQKTHLDIHER 279
                 889999999****987 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.033
      zf-met   6 CnvtfnsesqlksHlq 21 
                 Cn+tf+  ++lk+H +
  KHJ34813.1 294 CNRTFSQLGNLKTHER 309
                 **************75 PP

  == domain 3  score: 9.8 bits;  conditional E-value: 0.00072
      zf-met   1 fyCelCnvtfnsesqlksH 19 
                 ++Ce C ++f  +++ ++H
  KHJ34813.1 317 YQCETCGKRFAQRGNVRAH 335
                 79***************99 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.048
      zf-met   6 CnvtfnsesqlksHlq 21 
                 C ++f+  ++lksH +
  KHJ34813.1 352 CGKQFTQLGNLKSHQN 367
                 9*************75 PP

>> C1_4  TFIIH C1-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.5     0.057        86      17      49 ..     248     282 ..     232     291 .. 0.76
   2 ?   10.9   0.2   0.00027       0.4       4      49 ..     293     340 ..     288     342 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.057
        C1_4  17 kdeeltssryrC..ekCkndFCiDCDvFiHesLHn 49 
                 + ++ ++ ry+C  e C + F     + iHe  H+
  KHJ34813.1 248 AGRSKSKKRYQCtiEGCTKSFFQKTHLDIHERAHT 282
                 33447899****5557**99999999999999986 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 0.00027
        C1_4   4 gCqkkfpklakkkkdee..ltssryrCekCkndFCiDCDvFiHesLHn 49 
                 gC ++f +l + k++e+  + +  y+Ce+C + F     v  H + H+
  KHJ34813.1 293 GCNRTFSQLGNLKTHERrhTGERPYQCETCGKRFAQRGNVRAHRIVHD 340
                 8*****999988877765567788**********99999999988885 PP

>> zf-LYAR  LYAR-type C2HC zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1      0.28   4.2e+02       6      18 ..     294     307 ..     287     309 .. 0.86
   2 ?    3.6   0.0     0.043        65       3      18 ..     319     335 ..     317     337 .. 0.86
   3 ?    7.7   0.2    0.0023       3.4       3      19 ..     347     366 ..     345     367 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.28
     zf-LYAR   6 CsktFdg.deykaH 18 
                 C+ tF++  + k+H
  KHJ34813.1 294 CNRTFSQlGNLKTH 307
                 ******99999999 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.043
     zf-LYAR   3 CiDCsktFdg.deykaH 18 
                 C  C+k+F +  +++aH
  KHJ34813.1 319 CETCGKRFAQrGNVRAH 335
                 777******99999999 PP

  == domain 3  score: 7.7 bits;  conditional E-value: 0.0023
     zf-LYAR   3 Ci..DCsktFdg.deykaHt 19 
                 Ci  DC+k+F++  + k+H 
  KHJ34813.1 347 CIldDCGKQFTQlGNLKSHQ 366
                 6666********99999996 PP

>> zf-C2H2_6  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.6    0.0078        12       7      24 ..     294     311 ..     287     314 .. 0.91
   2 ?    6.3   0.1    0.0067        10       2      12 ..     317     327 ..     317     339 .. 0.89
   3 ?    1.2   0.4      0.26   3.9e+02       7      20 ..     352     365 ..     350     370 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0078
   zf-C2H2_6   7 CsksFpslqaLggHkksH 24 
                 C+++F+ l +L +H ++H
  KHJ34813.1 294 CNRTFSQLGNLKTHERRH 311
                 ****************99 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0067
   zf-C2H2_6   2 heCsvCsksFp 12 
                 + C +C+k+F 
  KHJ34813.1 317 YQCETCGKRFA 327
                 89********5 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.26
   zf-C2H2_6   7 CsksFpslqaLggH 20 
                 C+k+F  l +L  H
  KHJ34813.1 352 CGKQFTQLGNLKSH 365
                 *****999999888 PP

>> zf-C2HC_2  zinc-finger of a C2HC-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.2      0.07     1e+02       6      12 ..     292     298 ..     292     300 .. 0.88
   2 ?    6.7   0.8    0.0045       6.7       4      14 ..     318     328 ..     317     329 .. 0.92

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.07
   zf-C2HC_2   6 pkCgRsF 12 
                 p+C+R+F
  KHJ34813.1 292 PGCNRTF 298
                 79***** PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0045
   zf-C2HC_2   4 pCpkCgRsFnp 14 
                 +C+ Cg +F++
  KHJ34813.1 318 QCETCGKRFAQ 328
                 9********96 PP

>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   3.3     0.017        25       6      15 ..     317     326 ..     286     329 .. 0.54
   2 ?    6.5   2.6    0.0059       8.8       6      17 ..     317     333 ..     316     359 .. 0.69
   3 ?    1.3   0.1      0.26   3.9e+02       9      19 ..     350     360 ..     344     368 .. 0.76

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.017
  Zn-ribbon_8   6 YrCeeCghef 15 
                  Y+Ce Cg++f
   KHJ34813.1 317 YQCETCGKRF 326
                  5555555555 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0059
  Zn-ribbon_8   6 YrCeeCghefe.....v 17 
                  Y+Ce Cg++f      +
   KHJ34813.1 317 YQCETCGKRFAqrgnvR 333
                  9*********9555553 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.26
  Zn-ribbon_8   9 eeCghefevlq 19 
                  ++Cg++f++l 
   KHJ34813.1 350 DDCGKQFTQLG 360
                  57*****9875 PP

>> zf-C2H2_11  zinc-finger C2H2-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       5.6   8.3e+03      10      23 ..     294     307 ..     289     308 .. 0.82
   2 ?    8.5   0.1    0.0011       1.7       5      28 ..     317     339 ..     314     339 .. 0.89
   3 ?    0.8   0.1      0.29   4.3e+02       9      23 ..     351     365 ..     347     370 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 5.6
  zf-C2H2_11  10 CGlcftSqlsLsRH 23 
                 C + f+  + L+ H
  KHJ34813.1 294 CNRTFSQLGNLKTH 307
                 88999988888877 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.0011
  zf-C2H2_11   5 cqCleCGlcftSqlsLsRHlfIvH 28 
                 +qC  CG  f+  +  + H+ IvH
  KHJ34813.1 317 YQCETCGKRFAQRGNVRAHR-IVH 339
                 7************9999997.666 PP

  == domain 3  score: 0.8 bits;  conditional E-value: 0.29
  zf-C2H2_11   9 eCGlcftSqlsLsRH 23 
                 +CG  ft  + L+ H
  KHJ34813.1 351 DCGKQFTQLGNLKSH 365
                 6******99999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (522 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1098  (0.0612416); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 3828.96
//
Query:       KHJ34814.1  [L=433]
Description: putative gpi ethanolamine phosphate transferase 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        7.9    7.1   7.8        4.3    8.0   0.0    3.7  3  DUF1279   Protein of unknown function (DUF1279)


Domain annotation for each model (and alignments):
>> DUF1279  Protein of unknown function (DUF1279)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   2.0      0.12   2.1e+03       8      72 ..      15      93 ..       9     114 .. 0.55
   2 ?    8.0   0.0   0.00024       4.3      59      81 ..     234     256 ..     172     261 .. 0.90
   3 ?    0.1   0.1     0.067   1.2e+03      14      44 ..     303     334 ..     300     349 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.12
     DUF1279  8 kkYGkvalgvylsislidlgicYllvks..gvdveelleklklsvkv............sskkvekksksswgefaiAY 72
                 +YG   l + ++is++ lg+  ++ ++    ++++   ++ + +              +++  ++  ++ +g ++i Y
  KHJ34814.1 15 TNYGLSRLRFGVTISIFGLGLSIYASSQfiTREIISCSIFYIIVFLHgitmfgssyveeEQSFWYWATSAWLGCLLIKY 93
                5677777777777777777766666655554444443332222222223444444444445555555555555555555 PP

  == domain 2  score: 8.0 bits;  conditional E-value: 0.00024
     DUF1279  59 kksksswgefaiAYaihKilipi 81 
                  + k +++ + +AY+ihKili i
  KHJ34814.1 234 LRLKHKITSYQTAYIIHKILICI 256
                 55678899999*********988 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.067
     DUF1279  14 algvylsislidlgicYllvks.gvdveelle 44 
                 alg   +is idl+  Y  v++ +v v+ +l 
  KHJ34814.1 303 ALGGSNAISSIDLSNAYNGVDNfNVIVVGVLT 334
                 56666789***********9998887766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       748  (0.0417201); expected 358.6 (0.02)
Passed bias filter:                      230  (0.0128284); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 3377.51
//
Query:       KHJ34815.1  [L=304]
Description: putative gpi ethanolamine phosphate transferase 2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.3e-17   63.1   3.6    1.3e-14   54.6   3.6    2.1  1  Phosphodiest   Type I phosphodiesterase / nucleotide pyrophos
    9.3e-06   25.2   0.1    1.3e-05   24.8   0.1    1.3  1  Sulfatase      Sulfatase
     0.0016   17.1   0.0     0.0022   16.7   0.0    1.1  1  DUF229         Protein of unknown function (DUF229)
  ------ inclusion threshold ------
      0.059   12.7   0.0      0.088   12.2   0.0    1.2  1  Metalloenzyme  Metalloenzyme superfamily


Domain annotation for each model (and alignments):
>> Phosphodiest  Type I phosphodiesterase / nucleotide pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.6   3.6     3e-18   1.3e-14       5     237 ..       2     206 ..       1     214 [. 0.78

  Alignments for each domain:
  == domain 1  score: 54.6 bits;  conditional E-value: 3e-18
                   EETT-BTTHHHHHGSTSHHHHHHHHHSEEESE.EE-SSS-SHHHHHHHHHHSS-HHHHS--SSSEEETTTTEEEEEETTTTGGGGGCTTS-HHHHHH CS
  Phosphodiest   5 slDGlradlldrlaellpnlaaLakegvsapn.lrpvfPtlTfpnhaslvTGlyPgeHGivgNtfydrktgeyvvfvtededaprwwqgepiwdtaa 100
                   ++D lr d ++  +    + ++L++ g+ +p   +++ Pt+T+p   +l TG+ P+   ++ N              ++d+  +  + ++  w t +
    KHJ34815.1   2 VVDALRSDFVYGNRSGFNFTQSLIRSGTAVPFtAHASPPTITMPRIKTLSTGSIPSFIDVILNF------------AESDK--TSSLASQDSWLTQM 84 
                   7999**999998335****************************************976666633............22222..12256677899999 PP

                   HTHTTCEEEESETTTTSEBTTCT.SC.TBHHSBTCT....CSTTSCHHHHHHHHHHHHHHHCHTHSHHHHHCTSSESEEEEEECCCHHHHHHH-TTS CS
  Phosphodiest 101 karglkaaalfwpgsevdystyyylvsetppryled...dfnakvpledkvdkavlqtwldaafakvvlekelekpdlllvyleetDtvgHkfGpds 194
                   ka   +  ++++  ++ ++        +  p+ +++     + +v+  + vd+ v+ + + ++ ++       ++++++++++ ++D++gHk Gp+s
    KHJ34815.1  85 KA-KNTGKSIMF--GDDTWL-------KLFPQTFDRadgTTSFYVSDFTEVDTNVS-RHIPQELEN-------KDWNVMVLHYLGLDHIGHKSGPKS 163
                   99.444556666..344443.......44444443333444455566666665566.555555556.......9*********************** PP

                   HHHHHHHHHHHHHHHHHHHHHHHTTGTTTEEEEEEES---EEE CS
  Phosphodiest 195 pevedalrrvDkaigdLlealderglsaetniilvSDHGmadv 237
                   p+++++ r+ D+++++ + al  +   ++t ++l++DHGm+d 
    KHJ34815.1 164 PNMFQKQREMDNVVNQVYMALTSKSHLESTLFLLLGDHGMNDA 206
                   ************************8889999*********997 PP

>> Sulfatase  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.1   2.9e-09   1.3e-05     214     308 ..     166     265 ..      92     266 .. 0.77

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 2.9e-09
                 HHHHHHHHHHHHHHHHHHHHHTTTGGGEEEEEEESSSSCCCGHHTTSSSCTTCSSSHHHHBEEEEEEETTTSHC..............EEECSEEEGGG CS
   Sulfatase 214 ylnsveyvDdligrvlaaLeenglldntlvvftSDhgasleesngplrggkganayeggtrvPllvwwpgekap..............rvseelvshiD 298
                  ++  +++D ++++v+ aL  +  l+ tl++ ++Dhg     ++++   ++g          P+lv  + ++++               ++ ++v+++D
  KHJ34815.1 166 MFQKQREMDNVVNQVYMALTSKSHLESTLFLLLGDHGMND--AGNHGGSSPG-------ETSPALVFISPKLKShsrklqaplqyqedFRYYTYVEQSD 255
                 5566789******************************954..3344444444.......4444444444444443655555998877777778888*** PP

                 HHHHHHHHTT CS
   Sulfatase 299 lfptildlag 308
                 ++pt+ +l+g
  KHJ34815.1 256 IVPTLSALLG 265
                 *******998 PP

>> DUF229  Protein of unknown function (DUF229)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   4.9e-07    0.0022     307     369 ..     166     226 ..     149     249 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 4.9e-07
      DUF229 307 kfnllealDedllkylkklekkgllentlvlllsDHGlrfgklrktsqGilEerlPlmlirlP 369
                  f+  + +D+ + ++ ++l  k+ le tl lll+DHG++  ++ +     ++e  P ++++ P
  KHJ34815.1 166 MFQKQREMDNVVNQVYMALTSKSHLESTLFLLLGDHGMN--DAGNHGGSSPGETSPALVFISP 226
                 67778899*****************************75..3333333345555555555555 PP

>> Metalloenzyme  Metalloenzyme superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0     2e-05     0.088     119     189 ..     129     205 ..     110     235 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2e-05
                    HHHHHHHHH.CC.-SEEEEEE-HHHHHHHTT-HH..HHHHHHHHHHHHHHHHHTTS-TTT....EEEEEE-SSB--T CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxx RF
  Metalloenzyme 119 vaekaldailsgkfdlvvvniknaDmvGHtgdle..atiaaieaaDeavkeildaieqvd....gilvvtADHgnae 189
                    v +++ +++++++ +++v+++   D +GH+  ++  +  +   ++D+ v+++  a+ ++     +++++++DHg  +
     KHJ34815.1 129 VSRHIPQELENKDWNVMVLHYLGLDHIGHKSGPKspNMFQKQREMDNVVNQVYMALTSKShlesTLFLLLGDHGMND 205
                    556677889889999***************98772257788899********99998764122268********765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2220.09
//
Query:       KHJ34816.1  [L=411]
Description: putative glutamate 5-kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.9e-39  134.1   1.1    1.1e-38  133.2   1.1    1.3  1  AA_kinase  Amino acid kinase family
    1.2e-13   50.8   2.7    1.2e-13   50.8   2.7    2.3  2  PUA        PUA domain


Domain annotation for each model (and alignments):
>> AA_kinase  Amino acid kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.2   1.1   1.2e-42   1.1e-38       3     240 ..       9     236 ..       8     237 .. 0.93

  Alignments for each domain:
  == domain 1  score: 133.2 bits;  conditional E-value: 1.2e-42
                 EEEEE-TTCCCCTCC.....HHHHHHHHHHHHHHHHTTEEEEEE--HHHHHHHHHHTCCCCCHHHC....E..HHHHHHHHHHHHHHHHHHHHHHHHHT CS
   AA_kinase   3 vVvKlGGssltdkee.....aslrrlaeqiaalkesgnklvvVhGggsftdgllalksglssgelaaglrstleeagevatrdalaslgerlvaallaa 96 
                 +V+KlG ss+ d+++     ++l+++++   +l+++g+k+v+V++g +++ gl +   +++ ++++              + + la++g+  +++l+++
  KHJ34816.1   9 IVIKLGTSSIIDEKThepmlSNLENVVKTTLDLQKAGHKVVIVSSG-AIGVGLKRM--NYKMRPKH------------SSKLQGLAAIGQCRLMSLWDQ 92 
                 9*******777666669*****************************.999999999..66666666............2345***************** PP

                 THGEEEE-GGGTCEECCCE..HHHTTTCEEECCHHHHHHHTT-EEEEESEEEEETTTEEEEE-HHHHHHHHHHHCTSSEEEEEESSSSCESSTTTTCCT CS
   AA_kinase  97 glpavglsaaaldateagrdegsdgnvesvdaeaieelleagvvpvltgfigldeegelgrgssDtiaallAealgAdkliiltdVdGVydadpkkvpd 195
                 ++++++ + a++++t++++    d+n + + +++++ell+ gv+p++++++++ + +   +g++Dt++a+ A++++A+ l ++tdVd +yd +p+ +++
  KHJ34816.1  93 LFSQYNQPIAQILLTRNDI---ADRNQYLNAQNTFRELLDIGVIPIVNENDTIAVSEI-KFGDNDTLSAITAAMIHANFLFLMTDVDCLYDTNPRSNSN 187
                 *******************...*****************************9999987.59************************************** PP

                 TCECCEEEHHHCHH.....CSSS.TTTHHHHCHHHHHHHHHCTT-EEEEE CS
   AA_kinase 196 arllpeisvdeaee.....saselatgGmkvkhpaalaaarrggipvvIt 240
                 ar ++ ++  +a++       s+l+tgGm +k+ aa  a   g + +vIt
  KHJ34816.1 188 ARAIEVVDDLSALQvdvssAGSNLGTGGMSTKIVAARLATSAG-VTTVIT 236
                 *******99999999***999*********************9.777775 PP

>> PUA  PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.1      0.27   2.4e+03      33      55 ..      44      64 ..      34      66 .. 0.75
   2 !   50.8   2.7   1.4e-17   1.2e-13       1      74 []     293     383 ..     293     383 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.27
                TTSEEEEEETTSCEEEEEEESS- CS
         PUA 33 egdvVaivdedgelvavGlanys 55
                +g  V+iv+    +++vGl +++
  KHJ34816.1 44 AGHKVVIVSS--GAIGVGLKRMN 64
                6677888888..78999987775 PP

  == domain 2  score: 50.8 bits;  conditional E-value: 1.4e-17
                 CEEEE-HHHHHHHHTT-EEEGGGEEEEETT--TTSEEEEEETTS.................CEEEEEEESS-HHHHHHHCTSEEEEEEEEE CS
         PUA   1 grvvvddgAvkallsgasLlapGvvevegdfeegdvVaivdedg.................elvavGlanysseelakikggksveiervl 74 
                 g++ +d gA++al ++a L+a Gv++veg+f + + V+iv  ++                 ++v+++l+nys+ e+++ikg  s eie++l
  KHJ34816.1 293 GTIYIDPGAYRALENKAGLFAVGVIGVEGNFVQLEAVRIVVVERdtkdnvteskdscveqgTEVGKALVNYSAMEITRIKGVGSNEIEKIL 383
                 789************************************9994334555555555666666**************************9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       654  (0.0364772); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 3218.68
//
Query:       KHJ34817.1  [L=249]
Description: putative cytochrome b561 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-17   63.7   7.4    1.8e-17   63.7   7.4    1.5  2  Cytochrom_B561  Eukaryotic cytochrome b561
  ------ inclusion threshold ------
       0.18   11.1   1.1       0.28   10.5   1.1    1.2  1  DUF5630         Family of unknown function (DUF5630)
        1.9    8.2  12.2         28    4.5  12.2    2.3  1  DUF2157         Predicted membrane protein (DUF2157)
        7.1    6.8  19.0       0.55   10.4   5.6    2.9  3  DUF4079         Protein of unknown function (DUF4079)


Domain annotation for each model (and alignments):
>> Cytochrom_B561  Eukaryotic cytochrome b561
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.2       2.1   9.4e+03      42      60 ..      50      68 ..      44      71 .. 0.56
   2 !   63.7   7.4   4.1e-21   1.8e-17       1     133 [.      75     205 ..      75     209 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 2.1
                    HHHHHHHHHHHHHHHHHHH CS
  Cytochrom_B561 42 qllalilavvgllavfksk 60
                      +++il +++++a +  +
      KHJ34817.1 50 AQAGIILLTAAVWASIFLH 68
                    4455555666666655555 PP

  == domain 2  score: 63.7 bits;  conditional E-value: 4.1e-21
                     HHHHHHHHHHTHHHHHHHTHHHHS-S...-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--SS-SHHHHHHHHHHHHHHHHHHHHHHHHT CS
  Cytochrom_B561   1 lHpvlmviGfvllmgeaiLvyrvsstrklskktkkllHlilqllalilavvgllavfksknekeianlyslHswlGlvtvilfllqlvlGfvlfl 95 
                     +Hp+l ++G  ll ++aiL+ + + t   +k+  ++ H++l  ++++  v+gl+++ ++k +++ a+++s H++lG+vt +++++q v+Gf+ ++
      KHJ34817.1  75 YHPLLNSAGI-LLLTQAILILQPTRT-ASQKRDGTVAHALLIGVGFSALVAGLVVIEYNKFSHNGAHFKSNHAILGFVTYFILVIQSVVGFTQYY 167
                     6****99995.6779*******6334.5677778899********************************************************** PP

                     SS---HHHH..HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Cytochrom_B561  96 lpklskklr..alllplHvllGlvifvlaivtallGllek 133
                      p l  ++   +++ ++H+++G ++++l ++t++++   k
      KHJ34817.1 168 TPLLYGSVAnaKAIYKYHRASGYITLILMLATVATAT--K 205
                     **998877611556777***************99987..3 PP

>> DUF5630  Family of unknown function (DUF5630)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.1   6.3e-05      0.28      85     153 ..     129     200 ..     127     214 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 6.3e-05
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHTT-TTHHHH......HHHHHHHHHHHSHHHHHHHHHHHHHHH CS
     DUF5630  85 eeleylkkaikygSihAlqellqelyeklkknkeeeiee...laeilknleklaklygtpGYLllanayfrl 153
                 e++++ +  + ++S hA+  ++++ +  +++    + +    l+  ++n++   k+++  GY+ l  +   +
  KHJ34817.1 129 EYNKFSHNGAHFKSNHAILGFVTYFILVIQSVVGFTQYYtplLYGSVANAKAIYKYHRASGYITLILMLATV 200
                 6899********************999999975544444469********************9776555555 PP

>> DUF2157  Predicted membrane protein (DUF2157)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5  12.2    0.0062        28      30     108 ..      34     122 ..      21     234 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.0062
     DUF2157  30 rrrsfleallvlGalllglGlilfvAanWqglsrlvkfllllvllllslllgavlwrdr............rvpprlgeallllaalllga 108
                 +++ ++  l++  a+l  +G+il+ Aa+W+++     +l    +ll s+++  +l + +            ++  ++++all+  ++  ++
  KHJ34817.1  34 EGNPLYANLIIGTAVLAQAGIILLTAAVWASIFLHNVTLFSYHPLLNSAGIL-LLTQ-AililqptrtasqKRDGTVAHALLIGVGFSALV 122
                 3445578889999****************99876666666666666666444.2333.236777787888755555666665554444333 PP

>> DUF4079  Protein of unknown function (DUF4079)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   2.2     0.024   1.1e+02      89     129 ..      49      89 ..      42      93 .. 0.86
   2 ?    8.2   2.5   0.00059       2.6      85     135 ..     112     163 ..      90     168 .. 0.72
   3 ?   10.4   5.6   0.00012      0.55      44     105 ..     138     206 ..     130     229 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.024
     DUF4079  89 lavvvLlalsaalvpeiqkgkstaRtlHialnvlalllfaw 129
                 la +++++l aa+  +i+ ++ t+ + H +ln++ +ll++ 
  KHJ34817.1  49 LAQAGIILLTAAVWASIFLHNVTLFSYHPLLNSAGILLLTQ 89 
                 45578999***************************999875 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00059
     DUF4079  85 lyaGlavvvLlalsaalvpeiqkgks.taRtlHialnvlalllfawqaitGl 135
                 l++G+++ +L+a  +++  + ++++    ++ H++l+++  +++++q++ G+
  KHJ34817.1 112 LLIGVGFSALVAGLVVIEYNKFSHNGaHFKSNHAILGFVTYFILVIQSVVGF 163
                 4677777777777777777777777667888888888888888888888876 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 0.00012
     DUF4079  44 kkvrdeHvklgslllllvvlgaigglvlly.......lrrgklfpssHlyaGlavvvLlalsaalvpei 105
                 + ++++H+ lg +  +++v+ +++g+   y       + + k ++  H  +G + ++L++  +a++++ 
  KHJ34817.1 138 AHFKSNHAILGFVTYFILVIQSVVGFTQYYtpllygsVANAKAIYKYHRASGYITLILMLATVATATKT 206
                 67899*******************************99999*********************9999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (249 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       856  (0.0477439); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 1970.24
//
Query:       KHJ34818.1  [L=339]
Description: hypothetical protein EV44_g5011 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1441  (0.0803726); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2502.81
//
Query:       KHJ34819.1  [L=894]
Description: putative choriogenin hminor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (894 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 6460.37
//
Query:       KHJ34820.1  [L=418]
Description: putative ornithine carbamoyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-45  153.8   0.0    5.8e-45  153.2   0.0    1.3  1  OTCace    Aspartate/ornithine carbamoyltransferase, Asp/Orn b
    1.4e-41  142.0   1.1    1.6e-41  141.8   0.2    1.6  2  OTCace_N  Aspartate/ornithine carbamoyltransferase, carbamoyl


Domain annotation for each model (and alignments):
>> OTCace  Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.2   0.0   6.5e-49   5.8e-45       2     155 ..     256     408 ..     255     410 .. 0.96

  Alignments for each domain:
  == domain 1  score: 153.2 bits;  conditional E-value: 6.5e-49
                 C.EEEEESSTTSHHHHHHHHHHHHCT-EEEEES-TTSSH-HHHHHHHHHHHHHHT-EEEEESSCHHHHTT-SEEEE--SSETTCCGGHHHHHHHHCCCS CS
      OTCace   2 glkiafvGdkknnvanslikllarlgmdvvlvaPkglepdkevleeakknakksggsititedleeavkgaDvvytdvwvsmgeekereerlkklkdyq 100
                 glkia+vGd+ nnv+ +l++++ +lg+++++++P g+e  ++ l+++  +a+++g+ ++ t+  eea+kgaDv++td+w+smg+eke e+rl++++++q
  KHJ34820.1 256 GLKIAWVGDS-NNVLFDLAIGAMKLGVNISVASPVGYEI-PASLRQLIVSANTTGAIFEETNVAEEAIKGADVIVTDTWISMGQEKEAEKRLQDFAGFQ 352
                 89********.**************************99.8889999999************************************************* PP

                 B-HHHHH..HS-TT-EEEE-S---BTTTB-HHHHTSTTBHHHHHHHHHHHHHHHHHH CS
      OTCace 101 vteellk..lakkdaivlHcLPakrgeEvtdeVfdsprsvvfeqaeNrlhtikAllv 155
                 vte+l +   ak++++++HcLP  +++Ev+d+Vf ++rs+vf +aeNrl+++ ++l 
  KHJ34820.1 353 VTEDLARrgGAKPHWKFMHCLP-RHQDEVDDSVFYGHRSLVFPEAENRLWAAISVLE 408
                 ******9777999*********.679*************************999986 PP

>> OTCace_N  Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0      0.93   8.3e+03      51      73 ..      53      75 ..      31      84 .. 0.60
   2 !  141.8   0.2   1.7e-45   1.6e-41       1     148 []      87     232 ..      87     232 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.93
                HHHHHHHHHHHHHTTSEEEEEES CS
    OTCace_N 51 tRTrvSfevAakrlGgkvlslse 73
                tR  +S  ++  +l+ k  ++++
  KHJ34820.1 53 TRRFLSSTSSSLQLSYKDNYMNN 75
                55555555666666666555554 PP

  == domain 2  score: 141.8 bits;  conditional E-value: 1.7e-45
                 S-BSSGGGS-HHHHHHHHHHHHHHHHHHHT.....TT-STTTTT-EEEEEESS--HHHHHHHHHHHHHTTSEEEEEESTTTSCTTTGGSTTSSCHHHHH CS
    OTCace_N   1 rhllsledlskeeieelldlaaelkekvkk.....ekkekllkgktlallFeepStRTrvSfevAakrlGgkvlslseaediqlssvskgrkEsleDta 94 
                 rhlls++dls++e++ l+++a + k ++k+     ++ + +l gkt+a++F+++StRTrvS+e A++ lGg++++l+ ++diql+     ++Esl Dta
  KHJ34820.1  87 RHLLSIADLSNSELKVLIHNALRNKTTIKSngvlpQHLRGSLIGKTVAMMFSKRSTRTRVSTEGAVAALGGHPMFLG-SSDIQLG-----VNESLHDTA 179
                 8**************************99988888888888************************************.77*****.....99******* PP

                 HHHHHHTSEEEEEESSHHHHHHHHHHHSSEEEEEEETSSB-HHHHHHHHHHHHH CS
    OTCace_N  95 rvlsryvdaiviRhpgaeeleelakyasvpviNagdgdgeHPtQaLaDlltire 148
                 +v+s+++ a+++R+++++e+ +lak +svpviNa+ +++ HP Q+++D+lt+ e
  KHJ34820.1 180 KVISSMSAALIARVNAHSEVTDLAKCSSVPVINAL-SNDFHPFQSITDFLTLTE 232
                 ***********************************.999************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (418 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       686  (0.038262); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2981.51
//
Query:       KHJ34821.1  [L=605]
Description: putative tyrosinase superfamily protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-51  175.8   0.0    2.5e-51  175.1   0.0    1.3  1  Tyrosinase   Common central domain of tyrosinase
    3.5e-29  101.9   0.0    5.7e-29  101.3   0.0    1.3  1  Tyosinase_C  Tyosinase C-terminal domain


Domain annotation for each model (and alignments):
>> Tyrosinase  Common central domain of tyrosinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.1   0.0   2.8e-55   2.5e-51       1     220 [.      99     351 ..      99     353 .. 0.81

  Alignments for each domain:
  == domain 1  score: 175.1 bits;  conditional E-value: 2.8e-55
                 TTSHHHHHHCCSSS--SSTSSSS......S-TSSTTHHHHHHHHHHHHHHHHHHH..............HHH...THCSEEEB--TSS-.....-SS-- CS
  Tyrosinase   1 pssydqlagiHgipftewkeeee......caHgnalFltWHRaYlllfEqalrei..............cgy...apdvtlPYWDwaad.ksspldesp 75 
                 +ss+++lagiHg pf++ +++e       c+H ++lF+tWHR+Yl+l+Eq+l+e+              ++y   a+++++PYWDwaa+  + ++  ++
  KHJ34821.1  99 RSSWYNLAGIHGRPFKPFDGVEGnsesgyCTHISVLFPTWHRPYLALYEQILSEMikdiaqkypeggirDRYvaaAANFRIPYWDWAANrFDGESVLPK 197
                 589***************999999****************************8888999*99999999955566699************5444444555 PP

                 HHHH-SEEE-TTCCGE-EEEEE-TTT--BESS......SSS-....G-SBTTCTCB-CTS-CGGGGGS-BTCSSHHHHHH.-GGGHHHHH--SHHHHHH CS
  Tyrosinase  76 eslggdgatipeenlsggcvisnplakytlkk......klgp....kakgtlkseenklaanprclkrenaelsaelata.ssleellkksesytsfsn 163
                  + +++g +++ + +   + i+npl +y++ +         +    + +gt++++ n++  + +  +  +++l+++ a+  s+++++l++ +sy +fsn
  KHJ34821.1 198 IFSESSGISVDGPVGR--QIIANPLFSYQFLPldpeqlP--NspfnQFTGTMRYPDNNNSLAVSHNNIATQALESNAASVrSRIYTILTNYHSYLAFSN 292
                 5555555666666655..************755444332..13355555556655555555555555555555555555568889************** PP

                 HHHH--------..HHHHHHHHHHHHHESSSTTSTTCGGGSTHHHHHHHHHHHHHHHHH CS
  Tyrosinase 164 tlegkkskeesa..lespHnavHvwvGangdmgdvataafDPiFflHHaniDrlwaiWq 220
                      + + +++  le++H++vH  vG+ g+m+ +++a+fDP+Ff+HHa++Dr++a+Wq
  KHJ34821.1 293 GGYRAEAPPSEQdsLEAIHDQVHALVGGGGHMSFIDYAGFDPVFFMHHAMVDRCFAMWQ 351
                 99998888777788********************************************9 PP

>> Tyosinase_C  Tyosinase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.3   0.0   6.4e-33   5.7e-29       1     122 []     460     581 ..     460     581 .. 0.93

  Alignments for each domain:
  == domain 1  score: 101.3 bits;  conditional E-value: 6.4e-33
  Tyosinase_C   1 dwvanvrvekyalggsftihfflGdppedpttwatapnlvGsvavfasaeeegcencqaaskvlvtgqvpLtsaLler..agelesldpeeVepyLkk 96 
                  +w+an+++ k+a + ++++++flG +++dp+ w+t+pnl+G +++f+s+   ++e+ + +++ +vt+ +pLt+aL+e+  +g l+sl+ e+++++L++
   KHJ34821.1 460 EWLANIQMPKSAQNAPYSVYIFLGPFNDDPKYWSTDPNLAGVHTMFQSSM--SMERSNDDNSPMVTAAIPLTNALIEKikTGDLASLSVEDITQWLEA 555
                  8*********************************************5444..44444689999**************976799*************** PP

  Tyosinase_C  97 nLkwrvvkadgeevdpeelpsLkvsv 122
                  nL++r++  dg+e+  e+lp++k+++
   KHJ34821.1 556 NLSYRILGLDGTEICEEDLPDFKITI 581
                  ************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 4291.30
//
Query:       KHJ34822.1  [L=551]
Description: putative pal1 cell morphology protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-51  174.9   0.3    1.3e-51  174.9   0.3    2.9  3  Pal1      Pal1 cell morphology protein
  ------ inclusion threshold ------
       0.41    9.9   9.9        0.8    8.9   9.9    1.5  1  CENP-N    Kinetochore protein CHL4 like


Domain annotation for each model (and alignments):
>> Pal1  Pal1 cell morphology protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.7     0.061   5.4e+02      51     135 ..     106     198 ..      96     201 .. 0.60
   2 ?    0.3   1.5      0.12   1.1e+03      29      61 ..     180     213 ..     142     257 .. 0.49
   3 !  174.9   0.3   1.5e-55   1.3e-51       1     138 []     260     401 ..     260     401 .. 0.91

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.061
        Pal1  51 ggagklnkksaldevfGredeeddkdl......aklsakakkkesset.....kaakksskevtafdsktkaelvhGeetaGLGssTFldGapasr 135
                  g+  ln+ks+ ++v G + ++d ++           + ++++e+        ++ ++s++ev +  +k+ a   +G++++   s  F d + +sr
  KHJ34822.1 106 IGRMVLNEKSDQSKVKGDKPQSDLSKSnrspryS---RPSQQRENLPPlaapgHRLRRSNEEVSQTRQKNMAGSFSGKNSTSKESDVFADPTSSSR 198
                 4556788888889999987776666655554431...22222222111112345667777777777777777777777777777777777666665 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.12
        Pal1  29 rNknskaaPvlAfpkdgannslgg.agklnkksa 61 
                 +N +sk++ v A p+ +  +s ++ ++++ ++++
  KHJ34822.1 180 KNSTSKESDVFADPTSSSRTSSRKpTERRPRRNS 213
                 2333333333333333322222221222222222 PP

  == domain 3  score: 174.9 bits;  conditional E-value: 1.5e-55
        Pal1   1 DtiDkLDvtglf.gglfHHdGPfDAvtphrNkn.skaaPvlAfpkdgannslggagklnkksaldevfGredeeddkdlaklsakakkkesset..kaa 95 
                 D+iDkLDvt+++ +glfHHdGPfDA++phrN++ sk+aP++Afpkd+ nn lgg g+ nk+++++ ++G++dee+++d  k  +   ++e+ ++  ++ 
  KHJ34822.1 260 DVIDKLDVTSIYgTGLFHHDGPFDACNPHRNRQgSKRAPMQAFPKDSLNNVLGGGGPINKRPDHAIFMGNKDEEAFHDYSKGGTGIYDTETYNNglNKS 358
                 99**********99****************************************************************766555555555544455777 PP

        Pal1  96 kksskevtafdsktkaelvhGeetaGLGssTFldGapasraai 138
                  + ++e+ +++++t++e++hGeet+GLG+sTFl+Gapas++ai
  KHJ34822.1 359 GNLRPESNVLSATTRVEPIHGEETLGLGTSTFLEGAPASKNAI 401
                 8889999*********************************985 PP

>> CENP-N  Kinetochore protein CHL4 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   9.9   8.9e-05       0.8     227     347 ..     139     261 ..     110     296 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 8.9e-05
      CENP-N 227 srp.rkriaLketslptrsLeallalrGpsrynaagGawsiyadasveksPldprkkhpilsekeedegdkeekksargrkekerlteeskstkerkkr 324
                 srp ++r  L + + p + L   ++ ++++r+++  G++s   + s e+  + ++++++ +s ++ +e     ++  +  ++++ l+ e+++++++++r
  KHJ34822.1 139 SRPsQQRENLPPLAAPGHRLRRSNEEVSQTRQKNMAGSFSGKNSTSKESDVFADPTSSSRTSSRKPTERRPRRNSESSIAERSKPLDLEEEKKRQERRR 237
                 5565778888899999999**********************************9999887776666555555555555555555666666666666666 PP

      CENP-N 325 rklvaqerfgek..dslaplervey 347
                   + +q+  ge+   s +p +++++
  KHJ34822.1 238 -REKKQRDHGENssRSRKPNRKLDV 261
                 .556666666665545555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (551 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1049  (0.0585086); expected 358.6 (0.02)
Passed bias filter:                      333  (0.0185733); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.26s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 3779.57
//
Query:       KHJ34823.1  [L=593]
Description: putative lysyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-77  261.2   0.6    1.6e-77  260.6   0.6    1.3  1  tRNA-synt_2      tRNA synthetases class II (D, K and N)
    2.8e-12   46.4   0.2      3e-10   39.9   0.1    2.5  2  tRNA_anti-codon  OB-fold nucleic acid binding domain
    1.9e-05   24.3   0.1      0.017   14.6   0.0    2.3  2  tRNA-synt_2d     tRNA synthetases class II core domain (F)
  ------ inclusion threshold ------
       0.14   12.1   0.4        1.1    9.1   0.0    2.6  3  zf-C3HC4_5       Zinc finger, C3HC4 type (RING finger)
       0.21   11.5   2.9       0.43   10.5   2.9    1.5  1  HEPN_MAE_28990   MAE_28990/MAE_18760-like HEPN


Domain annotation for each model (and alignments):
>> tRNA-synt_2  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  260.6   0.6   4.6e-81   1.6e-77       2     313 ..     237     585 ..     236     586 .. 0.91

  Alignments for each domain:
  == domain 1  score: 260.6 bits;  conditional E-value: 4.6e-81
                  CCHHHHTHHHHC.CSHHHHHHHHHHHHHHHHHHHHHHHTT-EE----SEESS--SSSS--EEEEETTT.TEEE-E-S-SHHHHHHHHHCTHSEEEEEE CS
                  xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2   2 eelrlknryldl.rtekvskvlrlrstvtkavrkyleengfieietPiLsksdteegarlFkvksrekekeffaLtqspqlylellivagidrvfqia 98 
                  +e r ++ryldl  +e++++ + +r+++++ vr++l++++fie+etP++    +++ a++Fk++++  + +++ ++++p+ly ++l+v+g++rv++i+
   KHJ34823.1 237 QEQRHRKRYLDLiMNESTRNSFLARAKIISFVRQFLDSRDFIEVETPMMNPIPGGATAKPFKTHHNDLNMDMY-MRVAPELYHKMLVVGGLSRVYEIG 333
                  78999**************************************************************988999.************************ PP

                  EEE--S--BTTB-S-CEEEEEEEEET-SCHHHHHHHHHHHHHHHHHHHHCSCCCCCHTTTTTS.EE-SSS-EEEEHHHHHHHHHTS............ CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx............ RF
  tRNA-synt_2  99 raFRaEdsrtdrhlaEFtqieaemsfieeedimqvleelikslvkevlessakdiefvirrns.kdlkkpfkrltykeaieklnei............ 183
                  r+FR+E ++ ++++ EFt++e++m++++  dim+++e+l++ +vk v+ +++++ ++++ ++   + ++p++r+++  a+e ++++            
   KHJ34823.1 334 RQFRNEGIDLTHNP-EFTTCEFYMAYADVYDIMELTENLVSGMVKYVTGGTTTKYHTQHGEEYeINWAAPWRRVEMIPALEDATKEkfppgdqlhtae 430
                  **************.********************************76666655555554445788899************9998888855554444 PP

                  ....-SS--HHHHHHHHH.............................HS--SEEEEEEEBGGGSTTCBBBSTTSTTBBSEEEEEETTEEEEEEEEB-- CS
                  ....xxxxxxxxxxxxxx.............................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 184 ....gkdldkaderalvk.............................keknepvfvtdfPaelkpFyarkeeddkkltesyDllingvElvgGslRie 248
                                   k                             ++  +p+f+t +P++++p+++ ++++ + l e+++ ++ + E+v+++++++
   KHJ34823.1 431 tnefL------------KnllkkvkvecsppltnarmldklvgefieETCVNPTFITGHPQMMSPLAKYHRTN-PGLCERFEAFVCKKEIVNAYTELN 515
                  33220............245556666688888888888889999998999***********************.9*********************** PP

                  SHHHHHHHHHHCCHH.....SSSGGGGHHHHHHHHCT--SEEEEEEEHHHHHHHHCT-SSGGGCSSS-XX CS
                  xxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 249 dpeeleeklkskgld.....eeaeekfswylealeyGapphgGlglGldRlvmlllgsesIrdviaFPkl 313
                  dp  ++ +++++  +     +ea+  ++++++ leyG+pp+gG+g+G+dRlvm+l++  sI++v+aFP +
   KHJ34823.1 516 DPFDQRLRFEEQARQkeqgdDEAQLIDENFCTSLEYGLPPTGGFGMGIDRLVMFLTDHYSIKEVLAFPFM 585
                  ***********999889999999*********************************************76 PP

>> tRNA_anti-codon  OB-fold nucleic acid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9   0.1   8.3e-14     3e-10       1      75 [.     130     219 ..     130     220 .. 0.93
   2 ?    3.9   0.0     0.015        54      40      68 ..     365     397 ..     357     399 .. 0.80

  Alignments for each domain:
  == domain 1  score: 39.9 bits;  conditional E-value: 8.3e-14
                      EEEEEEEEEEEEEEETTEEEEEEEETTEEEEEEEET.......HHHHHHHTTS-TTSEEEEEEEEEEC.........TTSSEEEEEEEEEE CS
  tRNA_anti-codon   1 VtvaGrvtsisdrsggkvifidlrDgtgriqvvlfr.......eeatklaenlkeGdvvrvtGrvkrr.........pggelelkveeiel 75 
                      V+v +r+ +++  sg+k++f+d+r +  ++qv++           +++++e+l++Gd++++ G++ r+         ++gel++ ++e+ l
       KHJ34823.1 130 VRVGARIFNKR-ASGNKLVFYDVRTEGVKLQVMCQLqeskqggVPFSEQHEHLRRGDIIGIVGYPARTapakkiekgEEGELSIFATEVIL 219
                      8999******9.********************************************************9888887555559******9976 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.015
                      HHHHTTS-TTSEEEEE.EEEEEC..TTS.SEEE CS
  tRNA_anti-codon  40 tklaenlkeGdvvrvt.Grvkrr..pgg.elel 68 
                      ++l enl  G+v +vt G+ +++  ++g e+e+
       KHJ34823.1 365 MELTENLVSGMVKYVTgGTTTKYhtQHGeEYEI 397
                      68899***********88888885533369998 PP

>> tRNA-synt_2d  tRNA synthetases class II core domain (F)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   4.8e-06     0.017     103     136 ..     328     361 ..     317     392 .. 0.75
   2 !    7.3   0.0    0.0008       2.9     212     234 ..     557     579 ..     541     587 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 4.8e-06
                   EEEEEEEEEBSST-SSSB-SEEEEEEEEEEETT- CS
  tRNA-synt_2d 103 kiisigrvfRrdavDathlaeFhqveglvvdenv 136
                   ++  igr fR++ +D th +eF+ +e+ ++  +v
    KHJ34823.1 328 RVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADV 361
                   67789*********************98876654 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0008
                   EEEEEEHHHHHHHHHT-SSGHHH CS
  tRNA-synt_2d 212 fafGlGveRlamlkygieDiRel 234
                    +fG+G++Rl m+ ++   i+e+
    KHJ34823.1 557 GGFGMGIDRLVMFLTDHYSIKEV 579
                   58***********9988877765 PP

>> zf-C3HC4_5  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.55     2e+03       6      46 ..      60     100 ..      58     102 .. 0.65
   2 ?    9.1   0.0   0.00032       1.1      12      30 ..     303     321 ..     296     335 .. 0.81
   3 ?   -2.1   0.0         1   3.6e+03      31      43 ..     466     478 ..     464     486 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.55
  zf-C3HC4_5   6 vCkssrYlnpdleflinpeCYhkmCesCvdRlF.sdGPnqCP 46 
                 v  ss+ + +d +  +np+ Y ++ +  +++l  ++ Pn+ P
  KHJ34823.1  60 VTSSSKNVEEDEKK-LNPNQYFEIRSRNINKLRqNKNPNPYP 100
                 55566666655443.589999988888888885245677766 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.00032
  zf-C3HC4_5  12 YlnpdleflinpeCYhkmC 30 
                  ln d+ + + pe Yhkm 
  KHJ34823.1 303 DLNMDMYMRVAPELYHKML 321
                 59****************5 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1
  zf-C3HC4_5  31 esCvdRlFsdGPn 43 
                 e+Cv+  F +G  
  KHJ34823.1 466 ETCVNPTFITGHP 478
                 68***99999854 PP

>> HEPN_MAE_28990  MAE_28990/MAE_18760-like HEPN
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   2.9   0.00012      0.43      57     157 ..      19     112 ..      15     121 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00012
  HEPN_MAE_28990  57 aksyidyinslgisysdlsenfkalikanalktlkkkkkpdrllkefskvkelsedltaeskdklllfssnldskviikgiskvlkklglsasln 151
                     +++y+d+++ +++s  +l+  +k++ k++   +    + p+ +++++++v+e   +l  +++ +    s n+++ + +k   + +    + ++ n
      KHJ34823.1  19 LTLYFDEVTGENVSKTELKRRQKQRQKQKEKLQREA-SAPKPVTSSSKNVEEDEKKLNPNQYFEIR--SRNINKLRQNK-NPNPY---PHKFHVN 106
                     789**********************88888888666.99999999999999999999999999988..88888877777.67888...7777777 PP

  HEPN_MAE_28990 152 lekeik 157
                     ++ +++
      KHJ34823.1 107 YDLRNF 112
                     766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (593 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1435  (0.0800379); expected 358.6 (0.02)
Passed bias filter:                      616  (0.0343577); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.42
# Mc/sec: 4269.77
//
Query:       KHJ34824.1  [L=200]
Description: hypothetical protein EV44_g0388 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-38  131.8   5.6    4.4e-38  131.5   5.6    1.0  1  Egh16-like  Egh16-like virulence factor


Domain annotation for each model (and alignments):
>> Egh16-like  Egh16-like virulence factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.5   5.6   2.5e-42   4.4e-38       1     147 [.      20     157 ..      20     161 .. 0.94

  Alignments for each domain:
  == domain 1  score: 131.5 bits;  conditional E-value: 2.5e-42
  Egh16-like   1 saHgvitkvtGangvngpglgvadgtprdgtsrasgsqaDttvfrdkeikkkkasglGrtlgsgkvniaaeiaklmagaesglptvsaggtltmtvhqv 99 
                 ++Hg+i+k++G+ g+ng++lg++  tprdg++r++ +qaD t f++++     a+++G+t+g+g+++ a+++akl+ ++++g+p++sagg++ mt+hqv
  KHJ34824.1  20 AGHGAIIKAVGDMGGNGSALGIDGATPRDGSTRNP-FQADSTRFKNNN-----ADACGETIGAGPNEPAKQMAKLV-KESNGMPMISAGGMVMMTLHQV 111
                 59****************************99766.********6655.....899********************.78999***************** PP

  Egh16-like 100 nqDGaGpltckiDststgtdakalqkaevtknvpGkgglsaakntdfp 147
                 n DGaGp++c+iDst+tgt+   ++k+ev +n+pGk+  s+ak+tdf 
  KHJ34824.1 112 NGDGAGPYSCMIDSTGTGTG--GWTKMEVATNIPGKNSRSKAKATDFV 157
                 ***************99888..5789*************9**999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       384  (0.0214178); expected 358.6 (0.02)
Passed bias filter:                      313  (0.0174578); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1553.20
//
Query:       KHJ34825.1  [L=1076]
Description: putative valyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   5.8e-215  715.1   0.7   5.8e-215  715.1   0.7    2.5  2  tRNA-synt_1    tRNA synthetases class I (I, L, M and V)
    7.8e-29  100.6   0.1    2.4e-28   99.0   0.1    1.9  1  Anticodon_1    Anticodon-binding domain of tRNA
    6.9e-17   61.3   0.4    3.9e-07   29.2   0.0    4.7  4  tRNA-synt_1g   tRNA synthetases class I (M)
    1.5e-08   34.4   7.5    4.5e-07   29.6   0.0    3.1  3  tRNA-synt_1_2  Leucyl-tRNA synthetase, Domain 2
    0.00048   19.6   0.2      0.012   15.0   0.0    3.0  3  tRNA-synt_1e   tRNA synthetases class I (C) catalytic domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.5   2.0       1.3   4.6e+03     448     482 ..      42      84 ..      32     113 .. 0.54
   2 !  715.1   0.7  1.6e-218  5.8e-215       2     602 .]     127     749 ..     126     749 .. 0.98

  Alignments for each domain:
  == domain 1  score: -4.5 bits;  conditional E-value: 1.3
  tRNA-synt_1 448 lkelvagreeeeaekkalekeakdkl........kkekgelek 482
                   kel+++r+  e+++k ++k+ak+ l         kek+ l +
   KHJ34825.1  42 EKELEKERKRAEKQAKFEQKKAKSALqfsasdskTKEKKALAQ 84 
                  3444444444444444444444444433333333444444443 PP

  == domain 2  score: 715.1 bits;  conditional E-value: 1.6e-218
  tRNA-synt_1   2 lyekWeeedvfkkelekeke.kke..filvdgPPyvtGslHiGhalaktlkdivirykrmkGkevlyvpGwDhaGlaieakvekklgakekkerkklg 96 
                  +y++We+e++fk+e++ + + k+   fi+v +PP+vtG+lH+Ghal ++l+d++ir++rm+Gk++l++pG+DhaG++++++ve++l+++e+k+r++lg
   KHJ34825.1 127 WYSWWEKEGFFKPEFTIDGKvKPAgsFIIVEPPPNVTGNLHMGHALGTALQDVMIRWNRMQGKTTLWLPGCDHAGISTQSVVENMLWRREQKTRHDLG 224
                  9*************998877654344************************************************************************ PP

  tRNA-synt_1  97 reefrekvrewkaeyaeeirkqvkrlGvsvDfdreylTldkeleeavkevfvrladkgliyrgkklvnwstklktalselEveykdkk.......... 184
                  r +f+e v++wk+ y+++i++ ++r+G s+D+ re++T+d+++++av+e+fv l+++g+iyr+++lvnw+tkl+tals+lEve k+            
   KHJ34825.1 225 RPKFVETVWQWKNDYHQRINNVLRRMGGSFDWTREAFTMDENFTAAVTETFVSLHEDGIIYRANRLVNWCTKLNTALSNLEVESKELPgrtllnvpgy 322
                  **************************************************************************************9999******** PP

  tRNA-synt_1 185 ......dalihvafpladkeevklviaTTtPeTllgdtavavnpeldyvitkeklilaeallkslvkkesekkiledergkeLegkevelpl.vnrki 275
                        ++++h+++p+++ ++  +++aTT+ eT+lgdta+av+p+                               der+k L+gk++ +p+  nr +
   KHJ34825.1 323 dkkiefGVIVHFQYPIEGTDQ-MIEVATTRIETMLGDTAIAVHPD-------------------------------DERYKCLVGKRAVHPFiPNRYL 388
                  ********************9.***********************...............................9***************66999* PP

  tRNA-synt_1 276 piiaddyvdkeaGtGvVkiaPahdedDyevgkkynlevinildedgtlteeaaefeglkvfdarkkvveelkekglllkaekiehsvpfcerskkpii 373
                  pii+d yv+ke+G+G+Vki+Pahd++Dy++g+++nle+ini ++dg+++++a+ + g+k+fd r+k+ ++lk+ gl++ ++++ ++vp+c +sk++i+
   KHJ34825.1 389 PIISDTYVEKEFGSGAVKITPAHDANDYALGERHNLEFINIFTDDGKMNDNAGPYVGQKRFDVRYKIQDDLKKLGLFVCKKDNPMTVPMCFKSKDIIE 486
                  ************************************************************************************************** PP

  tRNA-synt_1 374 yrateqWfvrvkeladaalkave..kvqfvpkskekryaswleniqdWciSRqrwWGhriplfvsketeevvvreelkelvagreeeeaekkalekea 469
                  + +++qW++++k++a+aal++v+  ++++ p+ +ek+y +w+eni+dWc+SRq+wWGh+ p+++++ ++    + + k +  gr+ +ea++ka++   
   KHJ34825.1 487 PLMKPQWWMKMKDMAAAALDVVKdgQIKILPENAEKSYLRWMENINDWCLSRQLWWGHQAPMYFAQIEGASNNDCDNKLWFSGRTIDEANSKAVKALP 584
                  ***********************99******************************************9988887799999999999999999988888 PP

  tRNA-synt_1 470 kdklkkekgelekdedvlDvWFsSgswpfstlgypeedteelkkffpadmlleGlDiirgWvarlillslaltgsePfkevlvhglvrdeeGrKmSKs 567
                  ++k+     +l++dedvlD+WFsSg+wpf+tlg+p++ t+++++ fp+ +l++G+Di+++W+ar+i++sl++tg++Pf+ev++h+l+rd+eGrKmSKs
   KHJ34825.1 585 NQKF-----TLKRDEDVLDTWFSSGLWPFATLGWPKK-THDFETLFPTTVLETGWDILFFWIARMIMFSLKMTGKVPFTEVYCHSLIRDSEGRKMSKS 676
                  8888.....****************************.************************************************************ PP

  tRNA-synt_1 568 lgNvidpldvik.....................................kygadalRltli.lsdvgrdinls 602
                  lgNvidp+d+i+                                     ++g+dalR++l+ +++ g di+++
   KHJ34825.1 677 LGNVIDPQDIIDgisleklhekllqgnlapeevekatkyqksafpdgipQCGTDALRFALVsYTTGGGDIAFD 749
                  *************************************************************9*******9875 PP

>> Anticodon_1  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.0   0.1   6.6e-32   2.4e-28       1     143 [.     794     937 ..     794     944 .. 0.89

  Alignments for each domain:
  == domain 1  score: 99.0 bits;  conditional E-value: 6.6e-32
  Anticodon_1   1 drwilselnklvkevteayeeyrfnkaasalyeffwndlcdwylelvkprlysesaedkraaqevllevletllrllaPfmPfitEelwqr.....ee 93 
                  +rw+l+++  +++e+++a+ e +f k  + +y+ ++n+lcd+++e +k +l++ + ++kr+a ++l+++le  l l++PfmP+itEelwqr     + 
   KHJ34825.1 794 ERWVLHKMTIAAREINQALSEREFMKSTNIIYHYWYNSLCDVFIENSKAILQDGTLDEKRSALNTLYTALEGALTLIHPFMPYITEELWQRlprrpQ- 890
                  69*************************************************9988888766*****************************9976432. PP

  Anticodon_1  94 eelgkkesimlaewpe.kaeelekeleeeevellkeivkairklrselkik 143
                     +  +si+la++p  ++++ + ++ e ++el+ ++ + ir+l se+ ik
   KHJ34825.1 891 ---DTTKSIVLAQYPVyDDDFYDLAA-EVAYELVLDVSRGIRSLMSEYCIK 937
                  ...45699*******87776665555.77999*999999999999999887 PP

>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.0   1.1e-10   3.9e-07       8     136 ..     160     307 ..     153     310 .. 0.76
   2 !   13.3   0.2   7.3e-06     0.026     177     238 ..     486     547 ..     467     558 .. 0.83
   3 !   11.8   0.0   2.1e-05     0.074     313     350 ..     657     695 ..     625     717 .. 0.78
   4 ?   -2.9   0.0      0.62   2.2e+03     344     369 ..     726     751 ..     722     754 .. 0.86

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 1.1e-10
                   B--SS---HHHHHHHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHHHHH.....TTS............-HHHHHHHHHHHHHHHHHHTT---SE CS
  tRNA-synt_1g   8 pYangklHlGhllevisaDifaRykrlrgeevlfvcgtDehGtpielkAek.....egv............tpeelvekvheeikelfkklnisfdk 87 
                   p ++g+lH+Gh+l +   D+++R++r++g+ +l++ g D+ G+ ++   e+     e+             t+ +  +++h++i++++++++ sfd 
    KHJ34825.1 160 PNVTGNLHMGHALGTALQDVMIRWNRMQGKTTLWLPGCDHAGISTQSVVENmlwrrEQKtrhdlgrpkfveTVWQWKNDYHQRINNVLRRMGGSFDW 256
                   7789*********88889************************98875443211111222011111111111333556789***************97 PP

                   EEE..TTSHHHHHHHHHHHHHHHHTT-EEEEEEEEEEETTTTEEE-GGG-E CS
  tRNA-synt_1g  88 ygr..ttseehkelvqeifkklkekgliyekeieqlycpkderflpdryve 136
                     +  t +e+ + +v e f  l+e g iy+ +  + +c+k ++ l++ +ve
    KHJ34825.1 257 TREafTMDENFTAAVTETFVSLHEDGIIYRANRLVNWCTKLNTALSNLEVE 307
                   65444788889999*****************************99998887 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 7.3e-06
                   EEE.EEEEEE-GGGGHHHHHHHH.HH-TT.SHHHHHHHH.HHHHT----EE-ESS-SSS-EET CS
  tRNA-synt_1g 177 evketehlffklskfekklkewieeeeke.leenvkkivkewlkegLkdlaisrdldwGipvP 238
                   e   + ++++k+++++ +  + ++  + + l+en++k  + w+++ ++d+++sr+l wG + P
    KHJ34825.1 486 EPLMKPQWWMKMKDMAAAALDVVKDGQIKiLPENAEKSYLRWMEN-INDWCLSRQLWWGHQAP 547
                   444457899**************88887899************99.*************9999 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 2.1e-05
                   S-EEEE--EE.E--------------HHHHHHHH-HHHH CS
  tRNA-synt_1g 313 kkvvaheylt.vegkKlSkSrgvvvkakealerldadll 350
                   ++v+ h+ +   eg+K+SkS g+v++++++++ ++ + l
    KHJ34825.1 657 TEVYCHSLIRdSEGRKMSKSLGNVIDPQDIIDGISLEKL 695
                   5666666664379******************99988876 PP

  == domain 4  score: -2.9 bits;  conditional E-value: 0.62
                   HH-HHHHHHHHHHHS-TTS-EEE-HH CS
  tRNA-synt_1g 344 rldadllRYylaaeapekkDldfswe 369
                   ++ +d+lR+ l++ +    D+ f  +
    KHJ34825.1 726 QCGTDALRFALVSYTTGGGDIAFDIK 751
                   5789***********99999999765 PP

>> tRNA-synt_1_2  Leucyl-tRNA synthetase, Domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.5   2.2       3.5   1.2e+04      41      63 ..      39      63 ..      26      93 .. 0.46
   2 !    8.6   0.0   0.00033       1.2      11      45 ..     333     367 ..     327     372 .. 0.88
   3 !   29.6   0.0   1.2e-10   4.5e-07      85     145 ..     374     435 ..     366     448 .. 0.88

  Alignments for each domain:
  == domain 1  score: -4.5 bits;  conditional E-value: 3.5
  tRNA-synt_1_2 41 lapehplvekl..aekkkelaafie 63
                   + +e++l ++   aek+++ ++  +
     KHJ34825.1 39 IKSEKELEKERkrAEKQAKFEQKKA 63
                   4444444444322222222222222 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00033
  tRNA-synt_1_2  11 eiefkveeseeklevfttrpdtlfGvtfvalapeh 45 
                    ++++++e++++ +ev ttr +t+ G t +a+ p+ 
     KHJ34825.1 333 HFQYPIEGTDQMIEVATTRIETMLGDTAIAVHPDD 367
                    567889***********************998876 PP

  == domain 3  score: 29.6 bits;  conditional E-value: 1.2e-10
  tRNA-synt_1_2  85 tglkaihPit.gekipiwvanyvlmeygtgavmavPahdqrDfeFakkynlpikqvikpede 145
                     g  a+hP+  ++ +pi    yv  e+g+gav   Pahd +D++  +++nl+++++ + +++
     KHJ34825.1 374 VGKRAVHPFIpNRYLPIISDTYVEKEFGSGAVKITPAHDANDYALGERHNLEFINIFTDDGK 435
                    6889****998999****************************************99886554 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.15   5.4e+02      18      45 ..     161     188 ..     158     194 .. 0.85
   2 !   15.0   0.0   3.2e-06     0.012     226     282 ..     644     701 ..     626     710 .. 0.81
   3 ?   -1.2   0.2      0.28     1e+03     107     162 ..    1010    1068 ..     988    1072 .. 0.61

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.15
                   BTTS--BHHHHHHHHHHHHHHHHHHHTT CS
  tRNA-synt_1e  18 tvydashlGhaRslvafDilrrilqalg 45 
                    v  + h+Gha  +   D++ r+ +++g
    KHJ34825.1 161 NVTGNLHMGHALGTALQDVMIRWNRMQG 188
                   678899**************99977665 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 3.2e-06
                   HHHHHHHSS.S--EEEEEEE--EEETTBE--TTTT---BHHHHHTTS-HHHHHHHHHS CS
  tRNA-synt_1e 226 laqseaafd.kqlvkyflhnghlkiegekmsksLknfitikdvlkkfdprqlRlllls 282
                   +  s  +++  ++++ + h+ +   eg+kmsksL+n+i  +d++   + ++l   ll+
    KHJ34825.1 644 IMFSLKMTGkVPFTEVYCHSLIRDSEGRKMSKSLGNVIDPQDIIDGISLEKLHEKLLQ 701
                   5555556665789999****999*********************99999998877766 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.28
                    HHHHHHHHHHHTTSEEE-TT...S-EEE-GGG-TTTTTTTT--HHHHHHT----S--S- CS
  tRNA-synt_1e  107 eiielvekliekgyaYavsd...gdvyfdvskkeeYgklskqnleelelgaegevseek 162 
                    ei +  +kl + + a a ++   +d+ ++ +  +e  +++k++l++le +++  v++ k
    KHJ34825.1 1010 EILKASNKLEKTNLAIARQKkilEDEGYKEKVSKELQEIEKKKLQDLEVERSAFVETIK 1068
                    44444555555555555554666667777777777777777777777777666555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1076 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2041  (0.113838); expected 358.6 (0.02)
Passed bias filter:                      806  (0.0449551); expected 358.6 (0.02)
Passed Vit filter:                       101  (0.00563333); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.02u 0.37s 00:00:01.39 Elapsed: 00:00:00.54
# Mc/sec: 5981.16
//
Query:       KHJ34826.1  [L=532]
Description: putative utp-glucose-1-phosphate uridylyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.5e-191  635.3   0.3   4.2e-191  635.0   0.3    1.1  1  UDPGP     UTP--glucose-1-phosphate uridylyltransferase
  ------ inclusion threshold ------
       0.27   10.0   4.8       0.47    9.2   0.2    2.9  3  DUF4301   Domain of unknown function (DUF4301)


Domain annotation for each model (and alignments):
>> UDPGP  UTP--glucose-1-phosphate uridylyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  635.0   0.3  4.7e-195  4.2e-191       1     413 []      83     497 ..      83     497 .. 0.98

  Alignments for each domain:
  == domain 1  score: 635.0 bits;  conditional E-value: 4.7e-195
       UDPGP   1 lesFkklferyleekskqekidwdkieplpeeevvdyedlkekeeekkellnklavlkLnGglGtsmGckgpKslieVrdgktfLdlivqqieelnkky 99 
                 +++F++lf+ryl++k++ +++dwd+i p+ +++vv+yedl   ++e+ ++lnklavlkLnGglGtsmGc+gpKs+ieVrdg++fLdl+v+qie+ln++y
  KHJ34826.1  83 MDNFFALFRRYLNDKARGNTLDWDRIAPPAHDQVVNYEDL--ANTETVSFLNKLAVLKLNGGLGTSMGCVGPKSVIEVRDGMSFLDLSVRQIEYLNRTY 179
                 799*************************************..88999**************************************************** PP

       UDPGP 100 nvdvPlvlmnSfnTdedtekilkkykkkkvdiltfnqsryPriskesllpvekkakkeekeewyPpGhGdlyesLknsglldkllaeGkeyiFvsniDN 198
                 +v+vP+vlmnSfnTd+dt++i+kky+++k+diltfnqsryPri k+sllp++k+ + +   +wyPpGhGd++esL+nsg+ldkl+a+G e+iF+sn+DN
  KHJ34826.1 180 DVNVPFVLMNSFNTDDDTQNIIKKYEGHKIDILTFNQSRYPRILKDSLLPAPKTYD-SPIYDWYPPGHGDVFESLYNSGTLDKLIAKGVEIIFLSNVDN 277
                 ****************************************************9995.789*************************************** PP

       UDPGP 199 lgatvDlkilnllvekkaeflmevtektradvkgGtlieyegklrlleiaqvpkehveefksvkkfkifntnniwinlkalkrlveekelkleiivnkk 297
                 lga+vDl+il+++v+++ae++me+t+kt+advkgGt+i+y+g++rlleiaqvpkehv+efks+kkfk+fntnniw+n+ka+kr+v ++el++eii n+k
  KHJ34826.1 278 LGAVVDLRILQHMVQTDAEYIMELTNKTKADVKGGTIIDYNGSVRLLEIAQVPKEHVNEFKSIKKFKYFNTNNIWLNVKAVKRVVMTNELEMEIIPNNK 376
                 *************************************************************************************************** PP

       UDPGP 298 tldegek......viqletavgaaiksFkkavginVpRsrflpvkttsdlLlvksdlysleegslvlnpkrsfktvplvkLgsefkkveefqkrfksip 390
                 t++ ++       ++qletavgaai++Fk+a+g+nVpR+rflpvkt+sdl+lvksdlysl++g+l+++p+r+ + +pl+kLg+ fkkv++fqkr++sip
  KHJ34826.1 377 TISADKMgesdisIVQLETAVGAAIRHFKNAHGVNVPRRRFLPVKTCSDLMLVKSDLYSLKHGQLQIDPNRF-GPAPLIKLGNDFKKVSDFQKRISSIP 474
                 **96665678999**********************************************************7.899*********************** PP

       UDPGP 391 slleldhltvsGdvtfgknvtLk 413
                 +++eldhlt++G v +g++vtLk
  KHJ34826.1 475 KIIELDHLTITGAVNIGRGVTLK 497
                 **********************8 PP

>> DUF4301  Domain of unknown function (DUF4301)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.2     0.043   3.9e+02      64     111 ..      42      88 ..      11     106 .. 0.68
   2 ?    0.8   0.0     0.019   1.7e+02     272     289 ..     262     279 ..     240     309 .. 0.62
   3 ?    9.2   0.2   5.2e-05      0.47     396     502 ..     318     427 ..     313     431 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.043
     DUF4301  64 eekkvvkfvPaSGaasRmfkelfefleeaeleeeeeekkkkelkkfle 111
                 +++  +    +S aas m  +l +++++++ +e+e++  + e+++f++
  KHJ34826.1  42 QSHMAFENTSTSVAASQMRNALNNLADTVT-NEAEKKYFEIEMDNFFA 88 
                 455555666789999999999999987777.44444555555555554 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.019
     DUF4301 272 LndldadivfikNiDNvv 289
                 L     +i+f+ N+DN+ 
  KHJ34826.1 262 LIAKGVEIIFLSNVDNLG 279
                 2233469*********63 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 5.2e-05
     DUF4301 396 svslqivEsaqidledkeqkeileeathFNPvdlvcavkdykg..ekfdLkkfvdkktgfiseKskeGkelkalElPGLWNGamadW.ntvfvevplet 491
                 + s++++E aq+ +e+ ++ + +++  +FN  ++   vk +k    + +L+  + +++  is       ++  + l      a+ ++ n+  v+vp   
  KHJ34826.1 318 NGSVRLLEIAQVPKEHVNEFKSIKKFKYFNTNNIWLNVKAVKRvvMTNELEMEIIPNNKTISADKMGESDISIVQLETAVGAAIRHFkNAHGVNVPRRR 416
                 5588999**************************99999998862245688888889999999988888899999999888888888736778******* PP

     DUF4301 492 FnPVKtvndLl 502
                 F PVKt  dL+
  KHJ34826.1 417 FLPVKTCSDLM 427
                 *********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       841  (0.0469072); expected 358.6 (0.02)
Passed bias filter:                      593  (0.0330749); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 3736.81
//
Query:       KHJ34827.1  [L=889]
Description: putative dna mismatch repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.9e-13   48.4   0.0      2e-12   47.1   0.0    1.6  1  HATPase_c_3     Histidine kinase-, DNA gyrase B-, and HSP90-l
    2.2e-11   43.5   0.1    5.1e-11   42.3   0.1    1.6  1  DNA_mis_repair  DNA mismatch repair protein, C-terminal domai
    6.6e-08   33.1   0.3      2e-07   31.5   0.1    1.9  2  HATPase_c       Histidine kinase-, DNA gyrase B-, and HSP90-l


Domain annotation for each model (and alignments):
>> HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.0   3.4e-16     2e-12       5     106 ..      25     128 ..      21     145 .. 0.79

  Alignments for each domain:
  == domain 1  score: 47.1 bits;  conditional E-value: 3.4e-16
  HATPase_c_3   5 kAlaelvdNsldAdaenvkievnknrgktgeivieDdGkGmseeelknalrlatsskeakrksts......lGkkGiGlklAslslgkkltvitkkeg 96 
                  + + el+dN+ldA+a+ v+i ++ n    ++i ++D+G+G+++e++    r +++sk ++ ++ +      lG +G  l++A + ++ k+ v++k+eg
   KHJ34827.1  25 SLVKELIDNALDAKATAVEIIISPNT--IDRIEVRDNGNGIPREDFNALGRRGHTSKLKTFEELKfiggvsLGFRGEALFSA-V-QLGKVFVTSKSEG 118
                  5689********************86..69******************9999999998654333345555577787774444.3.4567889****** PP

  HATPase_c_3  97 esstltldvd 106
                  e+ ++t +++
   KHJ34827.1 119 ETVATTAKLN 128
                  **98888776 PP

>> DNA_mis_repair  DNA mismatch repair protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.3   0.1   8.6e-15   5.1e-11      19     118 ..     260     369 ..     246     370 .. 0.91

  Alignments for each domain:
  == domain 1  score: 42.3 bits;  conditional E-value: 8.6e-15
                     EETTEEEEEEEE-CCG-BTT.GGEEEEEETTEEE--H.........HHHHHHHHHHHCCSSSSSB-EEEEEEEESSGGEE-TSSTT----EETTH CS
  DNA_mis_repair  19 eeeqlkieGfiskpelsrsk.rdkqflfvNgRlvksk.........elkkaireaYkellpkgrypvvvLnleidpeevDvNvhPtKreVrfqde 103
                     ++++++++ f++kp++   k ++ q++ v+gR+v+++          +k+ i++ ++e+ ++ + p++ ++++ + e+ D N++P+K+++ f +e
      KHJ34827.1 260 DKKKYTVDVFLPKPTADCPKlSHGQYISVDGRPVSNEkgtikriitIFKHYIKSCFTEKNMRISNPFLHMKIKCPMESYDPNIEPAKDDIIFINE 354
                     45668999******9887776899************9999999998899********************************************** PP

                     HCHHHHHHHHHHHHH CS
  DNA_mis_repair 104 eevieaieealkeal 118
                     + ++e ie   ke++
      KHJ34827.1 355 KILLENIEGVFKEVY 369
                     ******999888876 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.1   3.3e-11     2e-07       8     107 ..      25     124 ..      20     131 .. 0.69
   2 ?   -3.2   0.0         2   1.2e+04       7      23 ..     372     388 ..     372     398 .. 0.77

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 3.3e-11
                 HHHHHHHHHHHHHHSTTTEEEEEEEEEETEEEEEEEESSSSSTTHHHT...........GTCSTTCHHCSTCHTSTSSSHHHHHHHHHHHHTT.TEEEE CS
   HATPase_c   8 qiisnlvdNavkfatkageieveikaseddlvisveDnGiGipkedlk...........klfekfsqddstkrggggtGlGlsivkklvelmg.Geiwv 94 
                  ++++l+dNa+++  ka+ +e+ i+++    +i+v+DnG Gip+ed +           k         ++    gg+ lG+     ++  ++ G++ v
  KHJ34827.1  25 SLVKELIDNALDA--KATAVEIIISPNT-IDRIEVRDNGNGIPREDFNalgrrghtsklKT-------FEELKFIGGVSLGFRGEALFSA-VQlGKVFV 112
                 689*********6..9999999999544.889****************5554333222222.......2233335688888887777666.44478888 PP

                 EEETTTEEEEEEE CS
   HATPase_c  95 esepgrGttftft 107
                 +s++++  t+  t
  KHJ34827.1 113 TSKSEG-ETVATT 124
                 777744.444334 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 2
                 HHHHHHHHHHHHHHHST CS
   HATPase_c   7 rqiisnlvdNavkfatk 23 
                 rq+i n+v+ + k+++k
  KHJ34827.1 372 RQLIANIVGVSEKATQK 388
                 799*****999997444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (889 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       624  (0.0348039); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.41
# Mc/sec: 6534.39
//
Query:       KHJ34828.1  [L=471]
Description: putative histone deacetylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.4e-80  268.7   0.0    9.7e-80  268.3   0.0    1.1  1  Hist_deacetyl  Histone deacetylase domain


Domain annotation for each model (and alignments):
>> Hist_deacetyl  Histone deacetylase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  268.3   0.0   5.4e-84   9.7e-80       1     306 [.      64     359 ..      64     360 .. 0.93

  Alignments for each domain:
  == domain 1  score: 268.3 bits;  conditional E-value: 5.4e-84
                    SCCGTHHHHHHHHHHHHT.THHHHCCE.EE-----HHHHTTTS-HHHHHHHHCHHHHCHHT.TTHCCHHHCCTSTSSSSSTHCTTTCCHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl   1 hpenpkRlsaileslaesvglldelelliqpseatkeellkvHskeYlelleslsnelkkkeeakekeleeiasklldddtpvspktlkaallavg 96 
                    hp++p Rl  + + l+ ++g+    +++  +++a+keel+ +H+++Yl+ l+ ++    +++     + ++ +  l   d+pv++++l+++++ +g
     KHJ34828.1  64 HPMKPWRLT-LSKGLIMAYGMHA-AMDTYIARPAEKEELESFHTEDYLNYLKIAKVAQPDDV-----WPKDFN--LGGYDCPVFDGLLNYCSMYAG 150
                    899999999.9999999999764.5567999********************98765555554.....666666..6789***************** PP

                    HHHHHHHHHHTTSSSEEEETT.SS--TT-BTTB-BTTBSS-HHHHHHHHHHHCC-SS-EEEEE-SSS--HHHHHHCTT-TTEEEEEEEE-.CCTST CS
                    xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxx RF
  Hist_deacetyl  97 avleavdavlsgsvkaafvlv.rPpgHHakaseasGFClvNnvaiaikylqakhelkrvailDvDvHhGnGteeafysdpdvltlSiHry.egify 190
                    a+++a+++++sg  +a+++++  ++ HHak+ easGFC+vN++++ai +l +   ++r++++D+DvHhG+G+eeaf+s+++v+tlSiH+y + +f+
     KHJ34828.1 151 ASIDAARKLCSG--QADIAINwSGGLHHAKKAEASGFCYVNDIVLAILQLLR--YHPRILYIDIDVHHGDGVEEAFWSTDRVMTLSIHKYdGSSFF 242
                    ************..9***********************************99..347*********************************7799** PP

                    TSS--TT---SGGGTT....SEEEEEE-TT-BHHHHHHHHHHCHHHHHCCH--SEEEEEE-STTBTTSTT-S-BB-HHHHHHHHHHHCCCHGS-G. CS
                    xxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl 191 Pgtgaledlgegkgkg....fnlnvpleegtgdeeylkvfeeilrpvleefkPdlilvsaGfDalkgdplgelnlsvegykeltkklaeladkvkk 282
                    Pgtg+l+ +g +++ +    +++nvpl +g++de+y+++f+ ++ +++e+f+P ++++++G+D+l+gd+lg++n++v+g++ ++   ++l     +
     KHJ34828.1 243 PGTGDLNPTGPDSEDNpgahHAINVPLADGIDDEQYIYLFKAVVGKCVEKFRPTALVLQCGADSLAGDRLGRFNVQVQGHGACVAFCKSLNL---P 335
                    *********97666666677**********************************************************************98...9 PP

                    EEEEE-S---HHHHHHHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxx RF
  Hist_deacetyl 283 vvllleGGYnlealaravtavlsa 306
                    ++ll++GGY+++++ara+++ +s+
     KHJ34828.1 336 LLLLGGGGYTPRNVARAWAHETSI 359
                    9******************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (471 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       470  (0.0262145); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.39
# Mc/sec: 3657.83
//
Query:       KHJ34829.1  [L=742]
Description: putative smr domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.4e-15   55.8  11.4    1.3e-14   54.3  11.4    1.8  1  DUF1771    Domain of unknown function (DUF1771)
    3.8e-08   33.1   7.4    6.6e-06   26.0   0.3    2.9  2  zf_CCCH_4  Zinc finger domain
    9.1e-07   29.2   0.0    2.1e-06   28.0   0.0    1.6  1  Smr        Smr domain
    7.5e-06   25.7   1.2     0.0051   16.7   0.2    2.5  2  zf-CCCH    Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    0.00016   21.4   8.9    0.00091   19.0   0.2    3.1  2  zf-CCCH_4  CCCH-type zinc finger
    0.00017   21.9   4.1       0.25   11.9   0.1    2.4  2  zf-CCCH_2  RNA-binding, Nab2-type zinc finger
  ------ inclusion threshold ------
      0.096   12.9   5.3        1.9    8.7   0.8    2.5  2  zf-CCCH_3  Zinc-finger containing family
       0.11   12.4   0.0       0.74    9.7   0.0    2.2  2  UBA_4      UBA-like domain
       0.41   11.4   5.8          2    9.2   0.7    3.1  3  Torus      Torus domain


Domain annotation for each model (and alignments):
>> DUF1771  Domain of unknown function (DUF1771)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.3  11.4   6.3e-18   1.3e-14       1      64 []     536     599 ..     536     599 .. 0.99

  Alignments for each domain:
  == domain 1  score: 54.3 bits;  conditional E-value: 6.3e-18
     DUF1771   1 YerlRaeAdeharkrnelfekAaeAyrrGdgaaAkelseqGkehgekmeeanreAaeaIfeerN 64 
                 Y + R++A++h+ +rn++++ Aa+A++r+d +aAk ls +G++ +  m++a+reAa++++eerN
  KHJ34829.1 536 YLKARQDAIKHGILRNKFLQSAAQAWNRNDARAAKALSLRGQTENDYMRKAHREAARQLYEERN 599
                 8899***********************************************************9 PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.1   1.8   0.00069       1.4       1      19 []     289     307 ..     289     307 .. 0.93
   2 !   26.0   0.3   3.3e-09   6.6e-06       1      19 []     314     332 ..     314     332 .. 1.00

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00069
   zf_CCCH_4   1 Ckfflq.GtCkkGdkCrFaH 19 
                 C+f+   G+C + d CrF+H
  KHJ34829.1 289 CRFWSStGQCLRAD-CRFSH 307
                 ************76.99999 PP

  == domain 2  score: 26.0 bits;  conditional E-value: 3.3e-09
   zf_CCCH_4   1 CkfflqGtCkkGdkCrFaH 19 
                 Ck+++ G+C  Gd C F+H
  KHJ34829.1 314 CKYWIMGSCLAGDTCIFSH 332
                 ******************* PP

>> Smr  Smr domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0     1e-09   2.1e-06       1      59 [.     610     669 ..     610     684 .. 0.89

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 1e-09
                 EE-TT--HHHHHHHHHHHHHHHHHTT-SEEEEE--STTSTT..HCHHHHHHHHHHHCSTTE CS
         Smr   1 lDLhglrraealnvletfldaasakglrsvevihGkGahag..vgvLrpavmgwLagkeav 59 
                 lDLhgl+ +ea + le++l + +++ +r +  i G+G+h++  + +  + v+++L++ ++v
  KHJ34829.1 610 LDLHGLHPDEAVEYLERVLLENQNE-IRPIYAIIGTGHHSKngKDKVGKSVRSFLNEWRYV 669
                 8********************9988.*************7766889999999999987666 PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.2   2.6e-06    0.0051       5      26 ..     288     308 ..     286     309 .. 0.94
   2 !    7.4   0.1    0.0021       4.2       6      27 .]     314     334 ..     313     334 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2.6e-06
                 CBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH   5 lCrffmrtGyCkyGdrCkFaHg 26 
                  Crf++ tG+C + + C+F+H+
  KHJ34829.1 288 VCRFWSSTGQCLR-ADCRFSHD 308
                 7************.*******6 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0021
                 BCHHHHHS--TTGGG-SSBSCS CS
     zf-CCCH   6 CrffmrtGyCkyGdrCkFaHgq 27 
                 C+++   G+C  Gd+C F+H++
  KHJ34829.1 314 CKYWIM-GSCLAGDTCIFSHDP 334
                 998877.*************85 PP

>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   3.7     0.035        69       2      22 .]     288     308 ..     287     308 .. 0.71
   2 !   19.0   0.2   4.5e-07   0.00091       1      22 []     312     333 ..     312     333 .. 0.97

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.035
   zf-CCCH_4   2 lCpyfa.kGsCrfGdnCrFsHd 22 
                 +C+++  +G+C   d CrFsHd
  KHJ34829.1 288 VCRFWSsTGQCLRAD-CRFSHD 308
                 677777777776644.*****9 PP

  == domain 2  score: 19.0 bits;  conditional E-value: 4.5e-07
   zf-CCCH_4   1 rlCpyfakGsCrfGdnCrFsHd 22 
                 ++C+y++ GsC  Gd C FsHd
  KHJ34829.1 312 HICKYWIMGSCLAGDTCIFSHD 333
                 79*******************9 PP

>> zf-CCCH_2  RNA-binding, Nab2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.7   0.00023      0.46       2      17 ..     289     307 ..     289     307 .. 0.99
   2 !   11.9   0.1   0.00013      0.25       1      17 [.     313     332 ..     313     332 .. 0.98

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00023
   zf-CCCH_2   2 Crffpn...CtnpkCpFaH 17 
                 Crf+     C +++C+F+H
  KHJ34829.1 289 CRFWSStgqCLRADCRFSH 307
                 ******************* PP

  == domain 2  score: 11.9 bits;  conditional E-value: 0.00013
   zf-CCCH_2   1 pCrffpn..C.tnpkCpFaH 17 
                 +C++++   C  ++ C F+H
  KHJ34829.1 313 ICKYWIMgsClAGDTCIFSH 332
                 7******************* PP

>> zf-CCCH_3  Zinc-finger containing family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.8   0.00095       1.9      34      54 ..     286     307 ..     281     309 .. 0.87
   2 ?    5.5   0.2    0.0093        19       7      29 ..     313     335 ..     308     345 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.00095
   zf-CCCH_3  34 etvctlWq.egrclrevckfrh 54 
                  +vc +W   g+clr+ c+f h
  KHJ34829.1 286 GVVCRFWSsTGQCLRADCRFSH 307
                 589****7369*********99 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0093
   zf-CCCH_3   7 dcyffyystctkGdscpfrheea 29 
                  c ++    c  Gd+c f h ++
  KHJ34829.1 313 ICKYWIMGSCLAGDTCIFSHDPT 335
                 47788888888888888888765 PP

>> UBA_4  UBA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00037      0.74      14      40 ..     219     245 ..     210     248 .. 0.85
   2 ?   -0.4   0.0      0.52     1e+03      14      24 ..     616     626 ..     611     627 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00037
       UBA_4  14 deekArqlLeannWdLerAislyFdsg 40 
                 ++e++ + L ++++dL + i++++d +
  KHJ34829.1 219 SDEEIESALAMHGFDLSATITAFMDGQ 245
                 89***********************66 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.52
       UBA_4  14 deekArqlLea 24 
                  +++A+++Le+
  KHJ34829.1 616 HPDEAVEYLER 626
                 589*******8 PP

>> Torus  Torus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.2     0.047        93      62      93 ..     278     309 ..     269     312 .. 0.79
   2 ?    9.2   0.7   0.00098         2      69      92 ..     310     333 ..     306     339 .. 0.90
   3 ?   -0.6   0.0       1.1   2.2e+03      54      98 ..     479     522 ..     453     528 .. 0.68

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.047
                 -HHHHSTT--B-HHHH.HT--SSGGG-SSB-S- CS
       Torus  62 tkadkekesyfClfFa.rGlCakGkkCeylHrl 93 
                 t a ++++ ++C f++  G C + ++C++ H+l
  KHJ34829.1 278 TPAGQQRSGVVCRFWSsTGQCLR-ADCRFSHDL 309
                 55667778899**9972588876.79*****98 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00098
                 T--B-HHHHHT--SSGGG-SSB-S CS
       Torus  69 esyfClfFarGlCakGkkCeylHr 92 
                 ++++C ++  G C  G  C + H+
  KHJ34829.1 310 GNHICKYWIMGSCLAGDTCIFSHD 333
                 5689******************96 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 1.1
                 -HHHH----HHHHSTT--B-HHHHHT--SSGGG-SSB-S---SS- CS
       Torus  54 nikkdsGytkadkekesyfClfFarGlCakGkkCeylHrlPteed 98 
                 +++   G t++++ +++ +   ++     +G++ +  H +P+ ++
  KHJ34829.1 479 KMSPSPGPTQSRQ-DSKKIGKNWSTTSFRNGENSKAAHAIPSPQH 522
                 4555556666663.3556677777778889999999****99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (742 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 5148.60
//
Query:       KHJ34830.1  [L=119]
Description: hypothetical protein EV44_g3178 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.13   12.6   0.0        0.2   12.0   0.0    1.3  1  CCDC-167  Coiled-coil domain-containing protein 167


Domain annotation for each model (and alignments):
>> CCDC-167  Coiled-coil domain-containing protein 167
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.1e-05       0.2      55      82 ..      80     107 ..      55     109 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.1e-05
    CCDC-167  55 ekeLksLrkeNrksmllsvalllvlaLv 82 
                 ++ L++ ++e r+ +l+++++++v+++v
  KHJ34830.1  80 DEWLSQQHREKRRCRLIAICITGVVVMV 107
                 77899*******************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (119 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       808  (0.0450667); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 874.80
//
Query:       KHJ34831.1  [L=248]
Description: hypothetical protein EV44_g4245 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.36
# Mc/sec: 2087.12
//
Query:       KHJ34832.1  [L=141]
Description: putative chitin deacetylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.038   13.9   0.0      0.079   12.9   0.0    1.6  1  Polysacc_deac_1  Polysaccharide deacetylase


Domain annotation for each model (and alignments):
>> Polysacc_deac_1  Polysaccharide deacetylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   4.4e-06     0.079      85     121 ..       3      41 ..       1      44 [. 0.83

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.4e-06
                      HHHHHHHHHHS----EEE-GGGEE-HHH..HHHHHHTT. CS
  Polysacc_deac_1  85 rakdalrkalgreprlfryPygsasatv..levarelgf 121
                      +++ alr++lg  p+++r+Py+s sa++   + +++lg+
       KHJ34832.1   3 KNEMALRNILGVIPTYMRPPYSSCSAESgcEDDMKDLGY 41 
                      7899*******************9998755666777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      384  (0.0214178); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.27s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1127.72
//
Query:       KHJ34833.1  [L=131]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.19s 00:00:00.57 Elapsed: 00:00:00.33
# Mc/sec: 1178.32
//
Query:       KHJ34834.1  [L=620]
Description: putative qde-2-interacting protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (620 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.20s 00:00:00.77 Elapsed: 00:00:00.37
# Mc/sec: 4985.18
//
Query:       KHJ34835.1  [L=107]
Description: hypothetical protein EV44_g0026 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-08   32.8   0.1    9.8e-08   32.1   0.1    1.4  1  Pam16     Pam16
     0.0002   21.4   0.0    0.00034   20.7   0.0    1.3  1  DnaJ      DnaJ domain
  ------ inclusion threshold ------
       0.83    9.3   4.2       0.31   10.7   1.3    1.9  2  DUF3918   Protein of unknown function (DUF3918)


Domain annotation for each model (and alignments):
>> Pam16  Pam16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.1   1.6e-11   9.8e-08       2     109 ..       2     105 ..       1     106 [. 0.74

  Alignments for each domain:
  == domain 1  score: 32.1 bits;  conditional E-value: 1.6e-11
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXX.XXXXXXXXXXXXXXXX-HHHHHHHHT--G.--SHHHHHHHHHHHHHHT-CCCTS-HHHHHH CS
       Pam16   2 akraalkvivagtqvvgkalaralrqeiaaaraaadartsasereaaksnlkGisleeslkilnvee.dlnreevekryehlfevndkskGGslylqsk 99 
                 a  a++ v va++  +g+a   a+r         a+ +++ ++     +  + ++  e+  il ++e +l +e+v k +  l+ +n  ++GGs yl +k
  KHJ34835.1   2 ASLAVIGVGVAAAAFLGRAGLLAFRRSR-----SAELGGTFGKAYFKGGFEQRMTRREAALILQLSErQLTKERVRKSHRTLMMLNHPDRGGSPYLATK 95 
                 5556666666666666666666666554.....22233333333333344457999*********9989****************************** PP

                 HHHHHHHHHH CS
       Pam16 100 vfrakerlde 109
                 v  ake ld+
  KHJ34835.1  96 VNEAKEFLDK 105
                 ******9996 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   5.7e-08   0.00034       5      53 ..      58     103 ..      57     106 .. 0.78

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 5.7e-08
                 HHTSSTTG.-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHH CS
        DnaJ   5 iLgvskda.sedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevL 53 
                 iL++s+   +++ ++k++r+l++  HPD+  ++p  +    ++neA e+L
  KHJ34835.1  58 ILQLSERQlTKERVRKSHRTLMMLNHPDRG-GSPYLA---TKVNEAKEFL 103
                 7888887549999****************9.777333...3577777777 PP

>> DUF3918  Protein of unknown function (DUF3918)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.3   5.2e-05      0.31       5      30 ..       1      26 [.       1      30 [. 0.87
   2 ?   -2.7   0.1       0.8   4.8e+03      28      36 ..      62      70 ..      61      74 .. 0.58

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 5.2e-05
     DUF3918  5 mtSllalGaGaaayqmaqkndmmskR 30
                m+Sl  +G+G+aa+ +  + +++  R
  KHJ34835.1  1 MASLAVIGVGVAAAAFLGRAGLLAFR 26
                89**************9999887665 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.8
     DUF3918 28 skRnMKKlr 36
                s+R++ K r
  KHJ34835.1 62 SERQLTKER 70
                667776643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (107 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 849.17
//
Query:       KHJ34836.1  [L=541]
Description: putative t-complex protein 1 subunit zeta protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   8.5e-167  555.7   0.7   9.6e-167  555.5   0.7    1.0  1  Cpn60_TCP1  TCP-1/cpn60 chaperonin family


Domain annotation for each model (and alignments):
>> Cpn60_TCP1  TCP-1/cpn60 chaperonin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  555.5   0.7  5.3e-171  9.6e-167       1     490 [.      30     527 ..      30     528 .. 0.98

  Alignments for each domain:
  == domain 1  score: 555.5 bits;  conditional E-value: 5.3e-171
                 HHHHHHCCSSTTXXEEEEEETTSEEEEEXSHHHHHHCSXXXSHHHHHHHHHHHHCCCCCTTCHHHHHHHHHHHHHHHHHHHHCTXXHHHHHHHHHHHHH CS
  Cpn60_TCP1   1 ladivkttlGPkGmdKmlvnkggkvvvTnDGatilkeleiehPaakllveaaesqdeevGDGTttvviLageLleeaekliaagvhpttiiegyekale 99 
                 l+d++k++lGP G+ Kmlv+ +g++++T+DG+++l+e++i++P+a ++++aa++qd+ +GDGTt+vv+L+geLl++ae++i++g+hp+ +++gye a+ 
  KHJ34836.1  30 LQDVLKSNLGPLGTIKMLVDGAGAIKLTKDGNVLLREMQIQNPTAIMIARAATAQDDICGDGTTSVVLLVGELLKQAERYISEGLHPRIVTDGYELAKT 128
                 789************************************************************************************************ PP

                 HHHHHHHHHXEEBXSCSTT.HHHHHHHHHHCTTSSXXSTHHHHHHHHHHHHHCHCCCSEECSCCCEECCCCEECECTTSEEESEEEESS--SSTTSSCE CS
  Cpn60_TCP1 100 kaleaLkeiaveisseekdreeLlkvartslsskltskeaeelsklvvdAvklieenekeldlgrikvvkieggsledselveGlvldkgvlspdmpkk 198
                 +al++L+    +is + +dr+ Ll+vartsls+kl ++ ae+l+  +vdAv++i ++ ++ dl++i+++k++++  +d++l++Gl+ld+g ++pdmpk+
  KHJ34836.1 129 EALKFLDTF--KISRN-EDRDLLLCVARTSLSTKLNHSLAEKLTPDIVDAVLAIYQAPTKPDLHMIEIMKMQHRTASDTQLIRGLALDHGSRHPDMPKR 224
                 *******99..88866.799*******************************9998888999************************************** PP

                 EECEEEEEESS-BS--HHCCHHHCCCCSCCHHHHHHHHHHHHHHHHHHHHHHTTECE..........EEESS-B-HHHHHHHHHCT-EEE-S--HHHHH CS
  Cpn60_TCP1 199 lenakvllldvsLeiektetkttvvlsdaeeleklekaeekqleellekiiksgvnv..........vvcqkgiddlalhflakngilalrrvkkkdle 287
                 +ena +l+l+vsLe+ek+e+++++ +s+ae+++kl+++e+k+++e+l+ki++++++v          +++qkgid+l+l++lakngilalrr+k++++e
  KHJ34836.1 225 VENAFILILNVSLEYEKSEINSSFYYSNAEQRDKLVESERKFVDEKLKKIVALKKEVcggdskkgfvIINQKGIDPLSLDVLAKNGILALRRAKRRNME 323
                 *************************************************************************************************** PP

                 HHHHHHT--EBSCGGGGGCGC-EEEEEEEECCETTCCEEEEECESSSSXEEEEEEESTCCCHHHHHHHHHHHHHHHHHHHHHHEEEETTTCHHHHHHHH CS
  Cpn60_TCP1 288 rlakatGatavssledltpeelGtakkveeekigsekttiieevksgkiatillrgatdtvldeieraiedAlnvvknaiedekvvpGGGatelelakk 386
                 rl  ++G+ta +s++dl+p+ lG+a++v+e+ +g+ek+t+ieevk++k++til++g++ +++ +i +a++d+l++v n+i d+ vvpGGGa+ +++a++
  KHJ34836.1 324 RLQLICGGTAQNSVDDLSPDVLGWAGNVYEHILGEEKFTFIEEVKEPKSVTILIKGPNAHTITQISDAVRDGLRSVYNMIVDKSVVPGGGAFQVACAAH 422
                 *************************************************************************************************** PP

                 HHCCC..CTSXCCHHHHHHHHHHHHTHHHHHHHHHCTSXHHHHHHHHHHHHHTTXTTEEEETTTTCEEECCCCTXEEEHHHHHHHHHHHHHHHHHHHCE CS
  Cpn60_TCP1 387 lkeya..ksvsgeeqlaieafakALevipktLaeNaGldpievlaklraahnkgekelgidvesgeiidlveagvvDplkvkrqalksAteaastiLri 483
                 l+++a  k+v+g+ +++++af++AL++ipktLa+N+G+d ++ la+l+++h +g+  +g+d+++g++ d+v +g++D+++v r+a+ s++ +as +L +
  KHJ34836.1 423 LNSEAfrKTVKGKAKWGVQAFSDALLIIPKTLASNSGHDVQDALANLQDEHVEGN-IVGLDLKTGQPMDPVLEGIYDSFRVLRNAIASSSGIASNLLLC 520
                 *97662266**********************************************.******************************************* PP

                 EEEEXXX CS
  Cpn60_TCP1 484 deiikak 490
                 dei+ka+
  KHJ34836.1 521 DEILKAR 527
                 ****997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (541 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.37
# Mc/sec: 4363.97
//
Query:       KHJ34837.1  [L=789]
Description: putative cp2 transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-76  256.0   0.0      4e-76  255.3   0.0    1.2  1  CP2       CP2 transcription factor
  ------ inclusion threshold ------
      0.031   13.0   0.0      0.052   12.3   0.0    1.3  1  Tektin    Tektin family
      0.079   13.6   0.3        0.3   11.8   0.3    2.0  1  AKNA      AT-hook-containing transcription factor


Domain annotation for each model (and alignments):
>> CP2  CP2 transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.3   0.0   6.7e-80     4e-76      25     230 .]     239     458 ..     229     458 .. 0.93

  Alignments for each domain:
  == domain 1  score: 255.3 bits;  conditional E-value: 6.7e-80
         CP2  25 avsssteksrfevtLeaptamikkvneepltYLNkGQaYsislkdlgaaklselkgkklksvvrvsFeeeklrskeakllklWkegrgte......... 114
                 +++sste++rf+vtL+aptamik+ +e+p+tYLNk QaY  s++d +   l+   g++++++vr+sFe+e++r+++a++++lWkegrgt+         
  KHJ34837.1 239 SIPSSTENFRFHVTLNAPTAMIKHPDEIPVTYLNKCQAYTFSIIDKA-PILPLPVGTRYRTFVRISFEDEQQRQRPATCWQLWKEGRGTNeahqrggkl 336
                 56789*****************************************9.6667777*******************************************9 PP

         CP2 115 .aveivdvPlsggveeqkntqvelesssfnalsvtW....ngeeevkiavrvNclStdFsssKGvkGvPlrlqieTesidesskela..klevafCkvK 206
                  ave+v+   +   +++++t+vel+++sf+++sv+W     g  e+ +avr+N+lStdFs+sKGvkG+P+rl+++T++++++s +    + eva+CkvK
  KHJ34837.1 337 qAVEFVE-SNQQSENDENRTRVELDTASFDGFSVIWtpgsSGLAECTLAVRFNFLSTDFSHSKGVKGIPVRLCAKTQTLSTGSPHADseTSEVAYCKVK 434
                 99*****.577778888889****************88777889***********************************99987766535********* PP

         CP2 207 vFkdkGAeRKlkndvakvkkriek 230
                 +F+d+GAeRKl ndva+vkk+iek
  KHJ34837.1 435 LFRDHGAERKLANDVAHVKKTIEK 458
                 *********************987 PP

>> Tektin  Tektin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   8.7e-06     0.052     311     360 ..     433     483 ..     430     490 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 8.7e-06
      Tektin 311 vElcrDe.aqyrLveEvkeleetieaLkeklaeaeaslkaLertrleleed 360
                 v l rD+ a+ +L ++v ++++tie+L+++++++e+ +k+  +++ +  + 
  KHJ34837.1 433 VKLFRDHgAERKLANDVAHVKKTIEKLNQQIQQSESGMKDFGKRKRTGSSS 483
                 778888758999************************999988887665555 PP

>> AKNA  AT-hook-containing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.3     5e-05       0.3      41      90 ..     442     492 ..     437     497 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5e-05
        AKNA  41 sreleaeIyqlgqrleeLkdqtdqlkqkveefskdiaqds.psplqdarlp 90 
                 +r+l   + + ++ +e+L  q+ q  + ++ f+k+ +  s ++++++++ p
  KHJ34837.1 442 ERKLANDVAHVKKTIEKLNQQIQQSESGMKDFGKRKRTGSsSIKVHPNQRP 492
                 79999******************************9988877777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (789 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       808  (0.0450667); expected 358.6 (0.02)
Passed bias filter:                      627  (0.0349713); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.25s 00:00:00.98 Elapsed: 00:00:00.44
# Mc/sec: 5441.05
//
Query:       KHJ34838.1  [L=200]
Description: putative sec34-like family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-13   51.0   0.2    2.9e-13   50.0   0.2    1.5  1  Sec34           Sec34-like family
      0.004   17.2   0.2     0.0071   16.4   0.2    1.4  1  ARL2_Bind_BART  The ARF-like 2 binding protein BART
  ------ inclusion threshold ------
      0.012   16.0   0.6      0.017   15.6   0.6    1.3  1  DUF2779         Domain of unknown function(DUF2779)


Domain annotation for each model (and alignments):
>> Sec34  Sec34-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.2   4.8e-17   2.9e-13       1      69 [.     131     199 ..     131     200 .] 0.97

  Alignments for each domain:
  == domain 1  score: 50.0 bits;  conditional E-value: 4.8e-17
       Sec34   1 yldqLeskeeecdelleqtdealeqLeeleekfksvsektsslheaceqlleeqkrleelaeeieekLk 69 
                 y d Le+ e+++d+ll +t+++l+ L++l+e+f+s++ +t++++ +ce+ll++qkrl  l++ei + L+
  KHJ34838.1 131 YHDHLEMFERHLDKLLVDTNSTLDYLATLSESFRSIDRDTTAFKGKCEDLLADQKRLIILTREIGNALQ 199
                 7899*************************************************************9997 PP

>> ARL2_Bind_BART  The ARF-like 2 binding protein BART
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.2   1.2e-06    0.0071      24      74 ..     107     158 ..     102     182 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.2e-06
                     HHHHHHHHTT--S.S-SSTTHHHHHHHHHHHHHHHHHHHHTT-SSS--THHH CS
  ARL2_Bind_BART  24 eFidencivFdde.eenkleytdihkeYkklveklleslleeigismeefle 74 
                      F    ++ F+d+  e++le ++++ +  +++e++l++ll + + + + +++
      KHJ34838.1 107 GFSYSSYESFEDDlVEQNLEEYKLYHDHLEMFERHLDKLLVDTNSTLDYLAT 158
                     57778899****7699**********************99888877776665 PP

>> DUF2779  Domain of unknown function(DUF2779)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.6   0.6   2.9e-06     0.017      20     106 ..       6     148 ..       1     171 [. 0.80

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2.9e-06
     DUF2779  20 pYqqipfqfSlhilqeegevehkeflaespntdp.reelieeLikiieke................................................. 68 
                  Y+ ip q+S + +++ +e+ ++  l+es  ++p  + + +e ik+i ++                                                 
  KHJ34838.1   6 WYSFIPNQISTELFDSTHEDSNH-DLKESASKQPdDKTCKAESIKSISEIdskprafiscpnvtpikrsksysnffeakkllhhegtylsrrssyvdls 103
                 6999************6666333.444444444424445556666666666778********************************************* PP

     DUF2779  69 ....gsvvvynksfEksrlkelaqlfpeykeelkqiien....lvD 106
                      s+  y +sfE   +++ ++ ++ y ++l+ + ++    lvD
  KHJ34838.1 104 sstgFSYSSY-ESFEDDLVEQNLEEYKLYHDHLEMFERHldklLVD 148
                 *998888889.************99********9999776666444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.43
# Mc/sec: 1412.05
//
Query:       KHJ34839.1  [L=570]
Description: putative alpha amylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.5e-111  373.2   0.1   2.4e-111  372.5   0.1    1.2  1  Alpha-amylase   Alpha amylase, catalytic domain
    0.00033   19.9   0.0     0.0025   17.0   0.0    2.0  2  hDGE_amylase    Glycogen debranching enzyme, glucanotransfera
  ------ inclusion threshold ------
      0.015   14.8   0.1      0.026   14.0   0.1    1.4  1  Cellulase       Cellulase (glycosyl hydrolase family 5)
      0.085   13.0   0.1       0.27   11.4   0.1    1.9  1  Malt_amylase_C  Maltogenic Amylase, C-terminal domain


Domain annotation for each model (and alignments):
>> Alpha-amylase  Alpha amylase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  372.5   0.1  5.4e-115  2.4e-111       1     334 [.      32     388 ..      32     392 .. 0.98

  Alignments for each domain:
  == domain 1  score: 372.5 bits;  conditional E-value: 5.4e-115
                    --CHHHHCTCCCCCCCT-SCEEE-B-CE-S-TTTTSS-SCECCE-CCC--CCCCCCHHHHHHCTT-EEEEEE--SC--TTSCCCHCCHHSTTSGGG CS
  Alpha-amylase   1 GDLkGiiekLdYlkeLGvtaiwlsPifkspqadhgYdiadytkidpefGtnedlkeLiskahekgikvilDlVvNHtsdehewfkeslkkkgepkr 96 
                    GDL Gi +k+dYl +LGv+ +w++P+fkspq+d+gYd++dy+ ++  +Gt +d++e+i+++h++g+k+ilDlV+NHtsdeh wfkes+++k++pkr
     KHJ34839.1  32 GDLPGILSKIDYLNDLGVDIVWICPMFKSPQHDMGYDVSDYQDVHAPYGTVKDVDEIIKACHDRGMKLILDLVINHTSDEHPWFKESRSSKDNPKR 127
                    9*********************************************************************************************** PP

                    CCC-E..........ESS-STTC-TTTTCSCEECTTTTCEEESSS-TTS-BB-TTTCCCCCCCCC.CCCCCCTTT-SEEEETTCCCTTTCCCC... CS
  Alpha-amylase  97 dyyiwkegk....eekeppnnwkslfdgsaweydekaqeyylhlflkklpdLnteneevrkelkd.vvkfwlekgidGfRlDvvkhvskveal... 184
                    d+yiw++ +    ++++ppnnw+s+f+gsawe+de++qeyylhlf+k++pd+n enee+rk l++  ++fwlekgidGfR+D v+++sk++     
     KHJ34839.1 128 DWYIWRPARytedGQRIPPNNWRSFFSGSAWEWDETTQEYYLHLFAKQQPDINFENEETRKVLYEnSITFWLEKGIDGFRVDSVNMYSKDPSYrda 223
                    ******999999999*************************************************99***********************88889** PP

                    ..............HCCHCCHHHHHHHHHHHTCCGTT-EEEEE-.TT-SCCCHCCCC-CGG-SICECCITTCGGGCC-CTSTTSB-SS-HHHHHHH CS
  Alpha-amylase 185 ..............esngeflheftqalnetvasrkevmtvgEv.ssdasedlrvyttearlelemvldfphldvaqkakikeqlksisakklkel 265
                                    ng+  h + +++ + + +++ + tvgE  +  + e+   y ++++ el+ v++f ++d+++++kik q ++ ++ ++k +
     KHJ34839.1 224 piinkgfvqpaydlFCNGPSCHAYLKEMGAIM-KKYGALTVGELpFTPDFEKVLEYIKAENEELSIVFQFDFVDLGHGSKIKFQFEPWKLPEMKRI 318
                    *****************************998.9999******934557789999***************************************** PP

                    HHHHHHHS-CCCTTCEEES--TTS--HHHHTTSSTTTT.HHHHHHHHHCCCTSSSEEEEETTCCCT---- CS
  Alpha-amylase 266 lkkwlkaleeaaeeavtflgnHDqeRilsrlgddsaea.ekklklaaillltlrGvpviYyGeEigmtgg 334
                    ++++++ +e ++  ++tf +nHDq R++sr+g+d++e+ e++ k++a++++ l+G+ +iY+G+Eigm ++
     KHJ34839.1 319 ISNMQRFIEGTDAFTTTFCENHDQGRSISRFGSDAPEWrERSGKMLAMFMCALSGTIFIYQGQEIGMINA 388
                    *************************************999***************************997 PP

>> hDGE_amylase  Glycogen debranching enzyme, glucanotransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   5.6e-07    0.0025      27     113 ..      40     118 ..      30     127 .. 0.85
   2 ?    0.3   0.0     0.064   2.9e+02     414     433 ..     410     429 ..     388     432 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 5.6e-07
                   HHHHHHHTT--EEEES--EEE-TT--TTSEEEEEEE-TTT-.....SSC.HHHHHHHHHHHHHH--EEEEEE--SEEETT-CCCCC- CS
  hDGE_amylase  27 vlkeikekgYnmiHftPlqelGesnSpYSiadqleldkelfeekdkeekeedveklvkklekeygllsltDvVlnHtannskwleeh 113
                   +++  ++ g +++  +P+ +  +++  Y ++d ++++           +++dv++++k ++ + g+  + D+V nHt+++ +w +e 
    KHJ34839.1  40 KIDYLNDLGVDIVWICPMFKSPQHDMGYDVSDYQDVHAPY-------GTVKDVDEIIKACH-DRGMKLILDLVINHTSDEHPWFKES 118
                   5667788899999999999999999999999999988777.......4789******9886.67999****************9985 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.064
                   ETTGGGS-HHHHHHHHHHHH CS
  hDGE_amylase 414 iDNcHStPlhvaeylLdeaR 433
                   iDN  StP +v + l   aR
    KHJ34839.1 410 IDNGYSTPEEVMKNLQILAR 429
                   9**********999977777 PP

>> Cellulase  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   5.8e-06     0.026      59     105 ..      80     130 ..      40     164 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 5.8e-06
                 HHHHHHHHHHHHHHHTT-EEEEEEESS.....TTTCSSSSTTTTHHHHHHHH CS
   Cellulase  59 nslerveevvkyakenglyvildiHse.....egwltkadgnssedtaeeff 105
                   +++v+e++k++ ++g++ ild+  +       w+ k++++s+++  ++++
  KHJ34839.1  80 GTVKDVDEIIKACHDRGMKLILDLVINhtsdeHPWF-KESRSSKDNPKRDWY 130
                 67899******************9666666887884.555666666667764 PP

>> Malt_amylase_C  Maltogenic Amylase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.1     6e-05      0.27       1      56 [.     495     545 ..     495     558 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 6e-05
                     -EEEE---S-TTEEEEEEEETTEEEEEEEESS-EEEEE--GGGTT-EEEETTTTEE CS
  Malt_amylase_C   1 GsfefleadnrkvlaYlReyedetilvvaNrsaqaveldlselagrvpvelfggee 56 
                     G f+  +++n++ ++++++    + +v++N+++++++++l+  a+r+++ l+g+ e
      KHJ34839.1 495 GNFREFDVENENTFTFEKSG---KAIVFLNFTDKEQSFQLP--ADRKWKFLIGNVE 545
                     8999999*********9876...579***************..9****99999966 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (570 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       513  (0.0286129); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 4094.14
//
Query:       KHJ34840.1  [L=225]
Description: putative related to thermoresistant gluconokinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.6e-12   45.8   0.0    8.4e-12   45.5   0.0    1.2  1  SKI              Shikimate kinase
    1.3e-08   35.5   0.1    5.8e-08   33.3   0.1    2.2  1  AAA_18           AAA domain
      2e-07   31.2   0.0    2.7e-07   30.8   0.0    1.2  1  AAA_33           AAA domain
    9.8e-06   25.6   0.0    2.4e-05   24.4   0.0    1.6  1  Rad17            Rad17 P-loop domain
    1.2e-05   25.2   0.0    1.7e-05   24.7   0.0    1.2  1  Cytidylate_kin   Cytidylate kinase
    0.00036   21.0   0.0    0.00067   20.1   0.0    1.4  1  AAA              ATPase family associated with various cellul
     0.0027   18.1   0.0     0.0069   16.8   0.0    1.7  1  AAA_17           AAA domain
     0.0036   17.2   0.0      0.063   13.1   0.0    2.1  2  dNK              Deoxynucleoside kinase
     0.0039   17.5   0.0     0.0064   16.8   0.0    1.5  1  AAA_22           AAA domain
     0.0053   17.1   0.0      0.026   14.9   0.0    2.0  2  RNA_helicase     RNA helicase
     0.0075   16.2   0.0      0.012   15.6   0.0    1.2  1  ATPase_2         ATPase domain predominantly from Archaea
     0.0078   16.7   0.0      0.013   16.0   0.0    1.3  1  ABC_tran         ABC transporter
     0.0093   16.2   0.0      0.014   15.6   0.0    1.3  1  AAA_28           AAA domain
     0.0098   15.6   0.0      0.025   14.2   0.0    1.6  2  CoaE             Dephospho-CoA kinase
  ------ inclusion threshold ------
      0.011   15.7   0.0      0.023   14.7   0.0    1.5  1  AAA_5            AAA domain (dynein-related subfamily)
      0.014   15.2   0.0      0.034   13.9   0.0    1.7  1  AAA_29           P-loop containing region of AAA domain
      0.014   15.8   0.0      0.021   15.2   0.0    1.4  1  AAA_16           AAA ATPase domain
      0.019   14.7   0.0      0.034   13.9   0.0    1.3  1  RuvB_N           Holliday junction DNA helicase RuvB P-loop d
      0.027   13.9   0.0      0.046   13.1   0.0    1.3  1  Mg_chelatase     Magnesium chelatase, subunit ChlI
      0.027   13.7   0.0      0.044   13.0   0.0    1.2  1  NB-ARC           NB-ARC domain
      0.031   13.2   0.0       0.12   11.2   0.0    1.8  2  AAA_PrkA         PrkA AAA domain
       0.04   14.0   0.0      0.074   13.2   0.0    1.7  1  Cytidylate_kin2  Cytidylate kinase-like family
      0.046   13.7   0.0      0.087   12.8   0.0    1.4  1  TsaE             Threonylcarbamoyl adenosine biosynthesis pro
       0.18   11.6   0.0       0.23   11.3   0.0    1.2  1  CPT              Chloramphenicol phosphotransferase-like prot
       0.19   11.4   0.0        0.3   10.8   0.0    1.2  1  AAA_30           AAA domain


Domain annotation for each model (and alignments):
>> SKI  Shikimate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.5   0.0   1.2e-14   8.4e-12       2     107 ..      47     161 ..      46     205 .. 0.83

  Alignments for each domain:
  == domain 1  score: 45.5 bits;  conditional E-value: 1.2e-14
                 TSSHHHHHHHHHHHHTSEEEEHHHHHHHHHTS-HHHHHHHH...HHHHHHHHHHHHHHHHCCCSSEEEEE-TTGGGSHHHHHHHH........HHSEEE CS
         SKI   2 GaGKstvGkllAkklglefiDlDeliekrtgksiaeifeee...geegFrelEsevlkelleeeglViatGGGavlseenrellk........ekgivi 89 
                 G+GKst+Gk lA+ lg++fi+ De++ k +  ++++ +       ++    l ++ l++l++ ++ V+ t  +++l++++r++++         +  ++
  KHJ34840.1  47 GCGKSTLGKYLANVLGVPFIEGDEFHPKINVEKMSQGIPLTdadRWDWLVSLRQASLDRLVAGHHGVVLT--CSALKRKYRDVIRvapyyfhkIRIHFF 143
                 9*************************98888888887765511134444566677788888888666666..6*****************98767779* PP

                 EEE--HHHHHHHHHHTTS CS
         SKI  90 yLdvsleellerlkadke 107
                 yLd++  +ll+r+ka+k+
  KHJ34840.1 144 YLDAPESVLLARVKARKS 161
                 ***************997 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.3   0.1   8.1e-11   5.8e-08       2     115 ..      41     161 ..      41     169 .. 0.70

  Alignments for each domain:
  == domain 1  score: 33.3 bits;  conditional E-value: 8.1e-11
      AAA_18   2 lltGtpGvGKttlakeLskrlgfgvnlrdvakenglllevdpealdeskrldedkldklldaleenss.aleegknlvidghlaeleseaakdikk... 96 
                 lltG++G+GK+tl+k+L++ lg+ ++ +d +  +  ++   +    +   +d++    +l  l+++s  +l  g++ v+  + a  +++++++++    
  KHJ34840.1  41 LLTGPAGCGKSTLGKYLANVLGVPFIEGDEFHPKINVEKMSQG--IPLTDADRWD---WLVSLRQASLdRLVAGHHGVVLTCSALKRKYRDVIRVApyy 134
                 69*****************999966666666666666666666..4555555555...55555555443344444445555555555555555555888 PP

      AAA_18  97 ........vvLtaspeelleRlekRgy 115
                         ++L+a++++ll R+++R+ 
  KHJ34840.1 135 fhkirihfFYLDAPESVLLARVKARKS 161
                 88888888*****************86 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   3.8e-10   2.7e-07       2     121 ..      40     162 ..      39     174 .. 0.74

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 3.8e-10
      AAA_33   2 vllvGlpGsGKstlaerllkklgavllssdtlrrrlfgtdqqsktdytrvldr.lyqilnelarkalsagrn.vildatnlsrrerarflklar..rlg 96 
                 +ll G++G+GKstl + l++ lg+ +++ d+++ ++ +++  +   +t++  + +   l++   ++l ag + v+l    l+r+ r+ ++++a+   ++
  KHJ34840.1  40 WLLTGPAGCGKSTLGKYLANVLGVPFIEGDEFHPKINVEKMSQGIPLTDADRWdWLVSLRQASLDRLVAGHHgVVLTCSALKRKYRD-VIRVAPyyFHK 137
                 7899********************************996666555545433323444555555567777777477777777776665.55555512556 PP

      AAA_33  97 vpvrivvvetdeetlkeRlakRaan 121
                  +++  +++++e++l +R+++R+ +
  KHJ34840.1 138 IRIHFFYLDAPESVLLARVKARKSH 162
                 66777899**************875 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   3.3e-08   2.4e-05      39      75 ..      31      67 ..      24      78 .. 0.89

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 3.3e-08
       Rad17 39 vLesrkkriLLisGPsGCgkstvvkvLskelgiklre 75
                ++  ++k+i L++GP+GCgkst  k L+  lg+ ++e
  KHJ34840.1 31 SMRDEPKHIWLLTGPAGCGKSTLGKYLANVLGVPFIE 67
                56678999***********************987765 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   2.4e-08   1.7e-05       4      63 ..      43     102 ..      41     116 .. 0.90

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 2.4e-08
                     E-STTSSHHHHHHHHHHHHT-EEEEHHHHHHHHHHHHHHTT--TT-HHHHHHHHHT--EE CS
  Cytidylate_kin   4 DGPagsGKssvaralaeklglkyldtgalYRalalaalrrkvdlldeaalvelakevels 63 
                      GPag GKs++++ la+ lg+ +++  ++   +    + + ++l+d + +  l++  + s
      KHJ34840.1  43 TGPAGCGKSTLGKYLANVLGVPFIEGDEFHPKINVEKMSQGIPLTDADRWDWLVSLRQAS 102
                     6***********************************************998877665555 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   9.4e-07   0.00067       2      28 ..      41      67 ..      40      82 .. 0.93

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 9.4e-07
                EEESSTTSSHHHHHHHHHHHHTHEEEE CS
         AAA  2 llyGppGtGKTllakavakelgvefle 28
                ll+Gp G+GK++l k +a+ lgv+f+e
  KHJ34840.1 41 LLTGPAGCGKSTLGKYLANVLGVPFIE 67
                89***********************98 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   9.7e-06    0.0069       1     123 [.      43     160 ..      43     166 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 9.7e-06
                 EE-TTSSHHHHHHHHHHHHTEEEEEHHHHHHHHHHTTTSHSSHHHHCTSHHHHHHHHHHHHHHHHHHHH..HSSEEEEEE-SEEEETTEEEESSHHHHH CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthlsaGdllreeakrgglakardemrklpleekkelqkeaaekiaeea..kkkgvlvdghprikeqagfldglpkevl 97 
                 +G+ G+GK+t+ + l+  +g+++++ Gd +   ++ +++    ++   l   ++ +++  + ++  ++   +++gv+++  +  ++ ++ +   p   +
  KHJ34840.1  43 TGPAGCGKSTLGKYLANVLGVPFIE-GDEFHPKINVEKM----SQGIPLTDADRWDWLVSLRQASLDRLvaGHHGVVLTCSALKRKYRDVIRVAP-YYF 135
                 69***********************.****999887777....6666666666667777777766666454778888877777766677666666.567 PP

                 HHH..SEEEEEE--HHHHHHHHHHHT CS
      AAA_17  98 eelkpdaiilleadpeeilerrlkdr 123
                 +++   ++++l+a++ ++l+r++ ++
  KHJ34840.1 136 HKI-RIHFFYLDAPESVLLARVKARK 160
                 777.4578999**9999999998876 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.0   8.8e-05     0.063       4      28 ..      43      67 ..      41     105 .. 0.86
   2 ?    1.9   0.0      0.24   1.7e+02     118     146 ..     133     162 ..     115     170 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 8.8e-05
                EESTTSSHHHHHHHHHCCSTCEEEE CS
         dNK  4 eGnIgaGKstlvklLskklgvkvfe 28
                 G+ g+GKstl k L++ lgv+++e
  KHJ34840.1 43 TGPAGCGKSTLGKYLANVLGVPFIE 67
                6999****************99886 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.24
                 HHCCH.-SEEEEEE--HHHHHHHHHHCTTC CS
         dNK 118 eelak.pdlliYLkasletclerikkRgre 146
                  +++k   ++ YL+a+  ++l r+k R+ +
  KHJ34840.1 133 YYFHKiRIHFFYLDAPESVLLARVKARKSH 162
                 45555445788**************99875 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   8.9e-06    0.0064       4      36 ..      36      67 ..      32     132 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 8.9e-06
      AAA_22  4 tagilvvtGesGtGKTtllrrlleqldeeakae 36
                 + i ++tG++G+GK+tl + l++ l  ++++e
  KHJ34840.1 36 PKHIWLLTGPAGCGKSTLGKYLANVL-GVPFIE 67
                567889****************9987.344444 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   3.6e-05     0.026       2      23 ..      41      62 ..      39      84 .. 0.81
   2 ?   -0.6   0.0       2.4   1.7e+03      68      88 ..     197     218 ..     184     222 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 3.6e-05
  RNA_helicase  2 wlyGpsgeGKStlakeLakall 23
                  +l+Gp+g+GKStl k+La+ l 
    KHJ34840.1 41 LLTGPAGCGKSTLGKYLANVLG 62
                  689*************999876 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 2.4
  RNA_helicase  68 s.dlaelirlvsstpyplnmas 88 
                   + +++ l  + +s+py + +++
    KHJ34840.1 197 QvQEELLSSVLNSNPYLVRKKK 218
                   44888999999****9987765 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0   1.6e-05     0.012      14      44 ..      31      61 ..      23      67 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 1.6e-05
    ATPase_2 14 ilerepneiyfiYGpegsGKtaLlkeiienl 44
                 ++ ep++i +++Gp g+GK++L k +++ l
  KHJ34840.1 31 SMRDEPKHIWLLTGPAGCGKSTLGKYLANVL 61
                45678******************99988865 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   1.9e-05     0.013       9      33 ..      35      59 ..      30      86 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.9e-05
                ETTSEEEEEESTTSSHHHHHHHHTT CS
                xxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  9 kegekvaivGenGaGKStLlkllag 33
                ++ +++ ++G+ G+GKStL k la+
  KHJ34840.1 35 EPKHIWLLTGPAGCGKSTLGKYLAN 59
                5778999************999986 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.0     2e-05     0.014       4      43 ..      42      84 ..      40     117 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 2e-05
      AAA_28  4 itGgestGKTtlleaLaar.gypvv..pEaareileeklakge 43
                +tG+ ++GK+tl + La+  g+p +   E++ +i  ek+ +g 
  KHJ34840.1 42 LTGPAGCGKSTLGKYLANVlGVPFIegDEFHPKINVEKMSQGI 84
                8*****************88***99888999888888876665 PP

>> CoaE  Dephospho-CoA kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0   3.5e-05     0.025       5      34 ..      42      72 ..      39      85 .. 0.88
   2 ?   -2.3   0.0       4.3     3e+03      23      52 ..      82     110 ..      78     123 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.5e-05
                EEESTTSSHHHHHHHHHH.TT-EEEEHHHHH CS
        CoaE  5 ltGgiasGKstvanlfad.lgvpivDaDlvA 34
                ltG  ++GKst+ +++a+ lgvp +  D   
  KHJ34840.1 42 LTGPAGCGKSTLGKYLANvLGVPFIEGDEFH 72
                8*****************9********9865 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 4.3
                 TT-EEEEHHHHHHHTTCCTHHHHHHHHHHH CS
        CoaE  23 lgvpivDaDlvArqvvepgsealkkiveeF 52 
                 +g+p+ DaD    ++v   ++ l+++v+ +
  KHJ34840.1  82 QGIPLTDADRW-DWLVSLRQASLDRLVAGH 110
                 68899999986.567777777777777655 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   3.2e-05     0.023       3      27 ..      41      65 ..      39     102 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 3.2e-05
                EEE--SSSSHHHHHHHGGGGBS--E CS
       AAA_5  3 lLvGppGtgKselaerlaaalnrev 27
                lL Gp G+gKs+l ++la +l+ ++
  KHJ34840.1 41 LLTGPAGCGKSTLGKYLANVLGVPF 65
                8*******************97765 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   4.7e-05     0.034      20      38 ..      35      53 ..      26      61 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.7e-05
      AAA_29 20 dlkgatlltGpsGsGKSTl 38
                ++k + lltGp G GKSTl
  KHJ34840.1 35 EPKHIWLLTGPAGCGKSTL 53
                456689************8 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.0   2.9e-05     0.021      22      46 ..      34      59 ..      24     117 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 2.9e-05
      AAA_16 22 grp.elvllsGesGvGKsslvrellr 46
                ++p ++ ll+G++G+GKs+l + l++
  KHJ34840.1 34 DEPkHIWLLTGPAGCGKSTLGKYLAN 59
                4556899*************887775 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   4.7e-05     0.034      24      60 ..      28      64 ..      19      76 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.7e-05
      RuvB_N 24 eaakkreealdhvllyGpPGlGkttlakiiakelgvk 60
                e + +r+e+    ll+Gp G Gk+tl k +a+ lgv 
  KHJ34840.1 28 ELSSMRDEPKHIWLLTGPAGCGKSTLGKYLANVLGVP 64
                5567899998888*******************99986 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   6.4e-05     0.046      22      47 ..      37      62 ..      33      87 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 6.4e-05
  Mg_chelatase 22 gHnlllvGppGsGKtmlakrlpsllp 47
                  +H  ll+Gp+G+GK+ l k l+++l 
    KHJ34840.1 37 KHIWLLTGPAGCGKSTLGKYLANVLG 62
                  6899*****************99984 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   6.1e-05     0.044       7      38 ..      24      55 ..      20      63 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 6.1e-05
                HHHHHHHCTTTSCSEEEEEEESTTSSHHHHHH CS
      NB-ARC  7 kviekLlekdelqslvvalvGmgGvGKttlak 38
                +v ++L+ + +  + +  l G +G+GK+tl k
  KHJ34840.1 24 EVCNELSSMRDEPKHIWLLTGPAGCGKSTLGK 55
                688999996665558888***********976 PP

>> AAA_PrkA  PrkA AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00017      0.12      81     112 ..      30      61 ..      19      68 .. 0.86
   2 ?   -0.8   0.0      0.76   5.4e+02     187     203 ..     173     189 ..     156     196 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00017
    AAA_PrkA  81 aqrleerkqilyllGPvggGksslverlkkll 112
                 +   +e k+i +l GP g Gks+l + l ++l
  KHJ34840.1  30 SSMRDEPKHIWLLTGPAGCGKSTLGKYLANVL 61 
                 5567899*****************99998877 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.76
    AAA_PrkA 187 iakvePgdennqdisal 203
                  + +eP de+++d+s l
  KHJ34840.1 173 FTILEPPDEDEKDVSRL 189
                 56789**********98 PP

>> Cytidylate_kin2  Cytidylate kinase-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0    0.0001     0.074       7      30 ..      45      68 ..      42     162 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.0001
  Cytidylate_kin2  7 eyGsgGetigeaLAekLglpfydr 30
                       G+g++t+g+ LA+ Lg+pf++ 
       KHJ34840.1 45 PAGCGKSTLGKYLANVLGVPFIEG 68
                     57*******************975 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   0.00012     0.087      12      46 ..      27      64 ..      18      76 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00012
                HHHHHCH...TEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE 12 kklakal...gdvilLeGdLGaGKTtlvrglakalgve 46
                ++l ++    ++++lL+G+ G+GK+tl + la+ lgv 
  KHJ34840.1 27 NELSSMRdepKHIWLLTGPAGCGKSTLGKYLANVLGVP 64
                55555335556789*******************99985 PP

>> CPT  Chloramphenicol phosphotransferase-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00032      0.23       3      84 ..      39     113 ..      37     174 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00032
                 EEEEEE-TTSSHHHHHHHHHHHSSS-EEEEEHHHHHHHS-GGGGTSTTSEEEETTSEEE-HHHHHHHHHHHHHHHHHHHTT- CS
         CPT   3 iilLnGgsssGKsslaralqevldepwlhlgvDafvealppkrqdeadglefeteleeigpeldlllaalyeavaamaraGn 84 
                 i lL G +  GKs+l + l +vl  p++  + D+f+ ++  +++++++ l   t+ +  + ++ l  a+l + va++   G 
  KHJ34840.1  39 IWLLTGPAGCGKSTLGKYLANVLGVPFI--EGDEFHPKINVEKMSQGIPL---TDADRWDWLVSLRQASLDRLVAGHH--GV 113
                 6799***********************6..68*******99999988888...4444445555555555555555542..33 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00042       0.3      15      41 ..      34      60 ..      27      62 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00042
      AAA_30 15 tsgdrvavltGpAGtGKttalkalrea 41
                 +++ + +ltGpAG GK+t+ k l+++
  KHJ34840.1 34 DEPKHIWLLTGPAGCGKSTLGKYLANV 60
                56677889***********99888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       382  (0.0213063); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              25  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 1628.00
//
Query:       KHJ34841.1  [L=85]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.024   13.8   0.0      0.025   13.8   0.0    1.1  1  ATG19_autophagy  Autophagy protein Atg19, Atg8-binding


Domain annotation for each model (and alignments):
>> ATG19_autophagy  Autophagy protein Atg19, Atg8-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.4e-06     0.025      69     123 ..       6      59 ..       2      82 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.4e-06
  ATG19_autophagy  69 akeelatendrsLrvevtkkdnlleFklfnegdkivpgdlkleFqdeaservaik 123
                      +k++ ++e+++s    v++ d +l+F+l    d+ v+g+l   F+++++   +i 
       KHJ34841.1   6 KKKRAEKEQNKSKILSVNRPDDSLNFQLDTAVDSHVSGNLN-DFSSYSKSLQTIG 59 
                      56777888889988999***********************8.8998888877775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (85 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.35u 0.25s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 664.04
//
Query:       KHJ34842.1  [L=220]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       247  (0.0137766); expected 358.6 (0.02)
Passed bias filter:                      202  (0.0112667); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1616.20
//
Query:       KHJ34843.1  [L=260]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.19s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 2219.19
//
Query:       KHJ34844.1  [L=290]
Description: hypothetical protein EV44_g1615 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       967  (0.053935); expected 358.6 (0.02)
Passed bias filter:                      506  (0.0282224); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 2320.61
//
Query:       KHJ34845.1  [L=381]
Description: putative glycosyl hydrolase family 76 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-37  129.8  15.8    2.2e-37  129.4  15.8    1.1  1  Glyco_hydro_76  Glycosyl hydrolase family 76


Domain annotation for each model (and alignments):
>> Glyco_hydro_76  Glycosyl hydrolase family 76
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.4  15.8   1.3e-41   2.2e-37      15     352 ..      60     375 ..      41     380 .. 0.83

  Alignments for each domain:
  == domain 1  score: 129.4 bits;  conditional E-value: 1.3e-41
                     HHCETTECCTCTCBSCES-GHHHHHHHHHHHHHHHHHCTTC..CCHHHHHHHHHCCCTCEE-SSSTTCTCSSEHHHHHHHHHHHHHHHHH..... CS
  Glyco_hydro_76  15 kyYkgnesggtpgnlpdpyywWeagalfgalidywrltgds..tyndlitqallaqagenydympanqsrtegnDDqafwglaamtaaernfpep 107
                     ++Y+ n      g +++   wW+ + +++++   +++ + +  +++d++    l +a++           +e++DD  +w+la ++ + +     
      KHJ34845.1  60 TWYNTN-----DGLWDKA--WWPSANVVTMMAGLQEYFPSAinQMTDIVFPNTLINAQKT-----FPGFINEFYDDELWWALAWIKVYDI----- 137
                     333333.....5666555..****************999544477777777777777766.....44455679****************9..... PP

                     H--HHHHHHHHHHHHHHHHCB-SCSCCS-BBSEC..ESS--SEEEHHHHHHHHHHHHHHHHHH....--CHHHHHHHHHHHHHHHHSCSBTTTS- CS
  Glyco_hydro_76 108 tdepswLalAqavfntqasrwdeetcgGGlrWqiftwnsgydyknsisngplfqlaarLaryt....gnetYlewAekvwdWvedvgliddedwl 198
                     t+++++L+ A ++f+   s w ++ c GG++W       +++   ++ n  +f  a++La         + Y++ A + + W +++gli + + l
      KHJ34845.1 138 TKNETYLQTAAGIFEDSKSVWGQTPC-GGMWWDK-----NHTEVGAVVNELYFTTAIKLANRMpstpWPAYYMDEAVRSYTWFRESGLI-NGENL 225
                     99*******************99976.89***87.....55566699999999999999987755445566******************.77777 PP

                     B-SEEETTTCCEEEE---HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCEECTTEEEEEE-TTSTTCCTTHHHHHHHHHH...HHHH CS
  Glyco_hydro_76 199 vyDgasvednctdinklqwtYnqGtylsgaaylynaTgdekWldrvkgllnatlstffpdgnilyevacepsekcnnDqrsFkgilar...wlal 290
                     ++  + + ++c++ +++ ++YnqG++lsg a +  aT+d ++ d ++ +++at + ++ +++il e  cep+  cn+Dq +Fkgi++r   +l +
      KHJ34845.1 226 INNAL-DLTTCQNDGNYVFSYNQGILLSGLAEMTWATEDRQYADLADVIASATINAMTGSDGILRE-PCEPNA-CNGDQEQFKGIFSRnvqFLYK 317
                     77777.889*********************************************9999999****9.****98.*************95555555 PP

                     HH..SH.HHHHHHHHHHHHHHHHHHTTTB...TTTSB-TTTTTSSCCHHHHHHHHCCHHH... CS
  Glyco_hydro_76 291 taqlap.etadtiepllrasaeaaakscsggsdgttcglkwlkgtwdgdaglgeqmsaleviq 352
                        ++p eta  ++++l+ +a  ++++++    ++++gl w+     g  ++++q sal +i 
      KHJ34845.1 318 RNSYLPpETATLYKDFLQRNADSIWAKNNI---DNQMGLVWSGP--RGRVSVQTQSSALDAIV 375
                     5555555******************77764...6789****954..47777999***999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.36
# Mc/sec: 3196.68
//
Query:       KHJ34846.1  [L=891]
Description: putative ribonucleotide reductase large subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.2e-188  627.1   0.0   2.9e-188  626.7   0.0    1.2  1  Ribonuc_red_lgC  Ribonucleotide reductase, barrel domain
    6.4e-25   87.0   0.1    1.5e-24   85.8   0.1    1.7  1  Ribonuc_red_lgN  Ribonucleotide reductase, all-alpha domain
    1.7e-16   60.6   0.2    6.5e-16   58.7   0.1    2.2  2  ATP-cone         ATP cone domain


Domain annotation for each model (and alignments):
>> Ribonuc_red_lgC  Ribonucleotide reductase, barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  626.7   0.0  4.8e-192  2.9e-188       1     524 []     216     739 ..     216     739 .. 0.98

  Alignments for each domain:
  == domain 1  score: 626.7 bits;  conditional E-value: 4.8e-192
                      EEE......BSS-EEEE-X..............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXX CS
                      xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx RF
  Ribonuc_red_lgC   1 ssCfvlsv.edslesIletvkeaallskaggGvGlnlsklRakgslvkgtegaasGpvsfmklidavadvvkqgG.kRrGAamvylevwHpDie 92 
                      ssCf++++ eds+++I++t+k++a++sk++gG+Gln++++Ra+g++++gt+g+++G+v+++++++++a++v+qgG kR+GA ++yle+wH+Di+
       KHJ34846.1 216 SSCFLIDMkEDSIDGIYDTLKTCAMISKNAGGIGLNIHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGnKRPGAFAIYLEPWHADIF 309
                      8*******9************************************************************************************* PP

                      XXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.........................XXXXXXXXXXXXXXXXXXX CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Ribonuc_red_lgC  93 kfidaKekntgeeenrlsnlnisvgvpdlFmeavkedkdwtLfsPrtvvkleklygeefeeeyeeleekakikkkevkakeLfeeiaesawetg 186
                      +f+d++ kn+g+ee+r+++l++++++pdlFm++v+++++wtL++P +++ l ++yg+efe  ye++e++   +++++ a++L+ +i+e++ etg
       KHJ34846.1 310 EFLDLR-KNHGKEEVRARDLFYALWIPDLFMKRVEKNGEWTLMCPCECPGLADVYGDEFEALYEKYEQE-GKGRRTIMAQKLWYSIIEAQTETG 401
                      ******.**************************************************************.44557******************* PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Ribonuc_red_lgC 187 ePgvlfkDtiNrrnvlekakggkIratNlCgEiplleyes.vavCnLasinLakfvkkdeegkkefdwdelkkviqlvvraLdnvidvnkyplp 279
                      +P++l+kD++N+++++  ++ g+Ir++NlC+Ei+ +++++ vavCnLas+ L+++v   ++ +++fd+++l++v+q+vvr+L+++idvn+yp+p
       KHJ34846.1 402 TPFMLYKDACNKKSNQ--KNLGTIRSSNLCTEIVEYSSPDeVAVCNLASLALPTYV---NTADNTFDFHKLHDVCQVVVRNLNKIIDVNYYPVP 490
                      ****************..999******************999**************...567******************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..X......XXX CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxx RF
  Ribonuc_red_lgC 280 eiekntkktRriGlGvmgladalaklgipydseealkfarkitelltyyaykaSvelAkergpfplfekskyskgilpvdef..eekekedwee 371
                      e++k++ ++R+i +Gv+glad++++l++p+ds+ea  ++++i+e+++++a++ Sv+lAk+ g+++++e+s++s g+l++d++  ++++ +dw++
       KHJ34846.1 491 EARKSNLRHRPIAVGVQGLADVFLALRLPFDSPEAKHLNKQIFETIYHAALTSSVDLAKKLGTYETYEGSPASMGELQYDMWgvTPTDLWDWDS 584
                      **********************************************************************************8856679***** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXX CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxx RF
  Ribonuc_red_lgC 372 LreeikkyGlrnamvtalaPTgsiSliagtssgiePifalvykksvtvgeflevnpvfeeeLkklglwseellkki...lesvqgleeipeeik 462
                      L++ei+ yGlrn+ ++a +PT+s+S+i g ++++eP+++++y+++v +gef +vnp ++++L ++glws++++++i    +s+q++ +ip eik
       KHJ34846.1 585 LKAEIRIYGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWLLKDLVDMGLWSDNMKNRIisdGGSIQNISNIPAEIK 678
                      ****************************************************************************776667************ PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Ribonuc_red_lgC 463 rvfktaldidqedhikaqaaiqkwidqsiSktinlpneatvedvkelyllAwklGlKgvtyY 524
                      +++kt+++i+q+ +i+++a++  +idqs+S++i+l ++ t+ +++++++ +wklGlK+ +yY
       KHJ34846.1 679 ALYKTVWEISQRTIIQMAADRGAFIDQSQSMNIHL-KDPTMGKITSMHFAGWKLGLKTGMYY 739
                      ***********************************.*************************9 PP

>> Ribonuc_red_lgN  Ribonucleotide reductase, all-alpha domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.8   0.1   2.6e-28   1.5e-24       2      82 ..     142     212 ..     141     213 .. 0.96

  Alignments for each domain:
  == domain 1  score: 85.8 bits;  conditional E-value: 2.6e-28
  Ribonuc_red_lgN   2 kltynalkvledrYllkdengeivEspqqmfmRvAlalaiaealydkleedkdlaeefydlmssqkflpasPtlmnaGtel 82 
                      +++y+++k+le++Yll+ +++ ivE+pq+m+mRvA+++++         +d + a+e+y+lms+++f++asPtl+ aGt++
       KHJ34846.1 142 NYQYFGFKTLERSYLLRLNDK-IVERPQHMIMRVAVGIHQ---------DDIESAIETYNLMSNKYFTHASPTLFAAGTPQ 212
                      689****************87.*****************9.........9*****************************96 PP

>> ATP-cone  ATP cone domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.7   0.1   1.1e-19   6.5e-16       1      86 []       1      89 [.       1      89 [. 0.91
   2 ?   -3.7   0.0         3   1.8e+04      56      76 ..     844     864 ..     840     867 .. 0.77

  Alignments for each domain:
  == domain 1  score: 58.7 bits;  conditional E-value: 1.1e-19
                -EEE-TTS-EEE--HHHHHHHHHHHHHH.-HHHHHHHHHHHHHHHHHHHIIT-BHHHHHHHHHHHHH....HSS-HHHHHHHHHHHHHHHH CS
    ATP-cone  1 ikViKRdGtvepfdvekIkraiekAceg.seeeideiaeeveaevrkrlrdgisteeIqdlvektli....ehpdyavaaayilyrnlrke 86
                ++V+KRdG++e +  +kI++++++ c g + e +d+    + ++v ++ ++g++t e+++l ++t++    +hpdya++aa+i ++nl+k+
  KHJ34846.1  1 MFVVKRDGRKERVQFDKITARVSRLCYGlDAEHVDAG--AITQKVISGVYKGVTTIELDNLAAETAAymtvTHPDYAILAARIAVSNLHKQ 89
                89**************************744444444..6677779*******************************************95 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 3
                 HHHHHHHHHHHHSS-HHHHHH CS
    ATP-cone  56 eIqdlvektliehpdyavaaa 76 
                 e++d v ++li + d +++a+
  KHJ34846.1 844 ELRDPVRQVLISSEDDKIVAK 864
                 788889999997777777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (891 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       433  (0.0241508); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.40
# Mc/sec: 6749.34
//
Query:       KHJ34847.1  [L=103]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (103 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.26s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 771.54
//
Query:       KHJ34848.1  [L=553]
Description: putative methylmalonate-semialdehyde dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.1e-130  435.3   0.1   2.4e-130  435.1   0.1    1.0  1  Aldedh    Aldehyde dehydrogenase family
  ------ inclusion threshold ------
      0.038   13.0   0.0      0.063   12.3   0.0    1.3  1  LuxC      Acyl-CoA reductase (LuxC)


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  435.1   0.1  2.7e-134  2.4e-130       1     462 []      67     532 ..      67     532 .. 0.98

  Alignments for each domain:
  == domain 1  score: 435.1 bits;  conditional E-value: 2.7e-134
                 EET-SSSE.EEEEETTTCEEEEEEE-B-HHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTHHHHHHHHHHHH---HHHHHHHHHHHHHHHH CS
      Aldedh   1 wveseset.ievinPatgeviakvpaataedvdaavaaAkeafkawaklpaeeRaeiLrkaadlleerkeelaeletletGkplaearaeveeaidvlr 98 
                 +v+se+++ ++v++Pat++ +++vp+ t ++++a v++Ak+af++w++ +++ R++i+ k+ + ++++ ++la+ +tle+Gk+l +ara+v + ++v++
  KHJ34848.1  67 FVKSEATQfFDVHDPATNNLVTRVPQNTDAELQASVESAKKAFRTWKSFSVMARQQIMFKFTQGIRDNWDRLAASITLEQGKTLDDARADVFRGLQVAE 165
                 678888666****************************************************************************************** PP

                 HHHHHHHHHSEEEEEECTTEEEEEEEEE-SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHTTS-TTSEEE--SSTCCHH CS
      Aldedh  99 yyaelaeklegevlpssegklalvrrePlGvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeeaglPkgvlnvvtgsgsevg 197
                   ++  +++ gevl++++++++  +rePlG+v+aI+P+NfP+++++w++ +a aaGN+ +lKP+e+ p  a++lae++++ g+P+gvln+++g  s++ 
  KHJ34848.1 166 NSCNIPQQMIGEVLEVAKNMETKCYREPLGIVAAICPFNFPAMIPLWSIPIATAAGNCLILKPSERDPGAAMILAEIARDSGFPDGVLNIIHG-SSKTV 263
                 ****************99***************************************************************************.77899 PP

                 HHHHH-TTESEEEEES-HHHHHHHHHHHHCTTSEEEEEE---EEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHT- CS
      Aldedh 198 ealvehpevdkvsftGstevgrkiakaaaknlkrvtlElGGknplivledaDldkaveaivkgafgnaGQvCiaasrllvqesiydefveklveaakkl 296
                 + ++e+p+++++sf+Gs++ g+ i ++ +++ krv+  lG+kn+++ l+daD  +a+++iv +afg aGQ+C+a s l+   s+ + + + lv+ ak+l
  KHJ34848.1 264 NFIIEEPHIKAISFVGSNQAGEYIFANGSAKGKRVQSNLGAKNHAVTLPDADKLHALNSIVGAAFGAAGQRCMALSTLVMVGST-QSWYADLVKLAKSL 361
                 ***************************9999*********************************************99999887.899*********** PP

                 -BS-TTSTT-SB---SSHHHHHHHHHHHHHHHHTTSEEEE-TT.E.SB-SSSTTEE--EEEES-TTTSHHHHS---SSEEEEEEESSHHHHHHHHHSSS CS
      Aldedh 297 kvgdpldedtdvGPliseaqlekvekyveeakeegaklllGge.reeaglekgyfvePtvlanvtpdmriaqeEiFGPVlsvikfkdeeeaieiaNdte 394
                 kv  ++++++d+GP+is+a+ +++e+++++a++ega++ll+g+  +++++  g++v Pt+++nv+++m+++++EiFGPVl+ + ++++eea+++ Nd++
  KHJ34848.1 362 KVDGGFEKNVDLGPVISPASKKRIEDLISSAENEGATILLDGRnFKSKKYPGGNWVGPTIITNVKKHMECYRQEIFGPVLVCLDVDSLEEAVSLINDND 460
                 ****************************************9998778899999********************************************** PP

                 EESEEEEE-SBHHHHHHHHHHS-SSEEEESSSST--TTTSEB--CGGGEES....-BSHHHHHHHTEEEEEE CS
      Aldedh 395 yGLaagvftkdleraervaerleaGnvyiNdsttgaaealpfgGvkqSglG....reggkegleeytevktv 462
                 yG++ ++ft++ + a ++ +++++G+++iN ++ +   ++ f+G k+S  G    ++ gk gl++yt++ktv
  KHJ34848.1 461 YGNGVALFTRSGSAAATFQKKINVGQIGINVPIPVPLPMFSFTGNKKSIAGggasNFYGKRGLDFYTQLKTV 532
                 ************************************************99988888999***********98 PP

>> LuxC  Acyl-CoA reductase (LuxC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0     7e-06     0.063      87     140 ..     191     244 ..     173     301 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 7e-06
        LuxC  87 aqprglvlhvlsgNvp.llpvmsilqglLvknvnllkvSssdpflaaallkslad 140
                 + p g+v  + + N p ++p++si  +  ++n+ +lk+S  dp++a+ l +++a+
  KHJ34848.1 191 REPLGIVAAICPFNFPaMIPLWSIPIATAAGNCLILKPSERDPGAAMIL-AEIAR 244
                 5799**********9945899***********************87655.55554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (553 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       364  (0.0203023); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.22s 00:00:00.74 Elapsed: 00:00:00.37
# Mc/sec: 4522.53
//
Query:       KHJ34849.1  [L=210]
Description: putative pre-rrna-processing protein tsr2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-29  100.4   0.9    1.1e-28   99.7   0.9    1.3  1  WGG       Pre-rRNA-processing protein TSR2


Domain annotation for each model (and alignments):
>> WGG  Pre-rRNA-processing protein TSR2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.7   0.9   6.1e-33   1.1e-28       1      80 []      31     110 ..      31     110 .. 0.99

  Alignments for each domain:
  == domain 1  score: 99.7 bits;  conditional E-value: 6.1e-33
         WGG   1 FeegvalilhlWtaLklavengwggpdsadkrdwlagaivdlfkakeeldqedvedvLlqvmedeFevnveDdSaeevAe 80 
                 F+ g++l+l lW+ L+lav+ +wggp+s++kr+w+a+  +dl++++++ d++ +e++Ll+vm deFevnveDdSa++vAe
  KHJ34849.1  31 FDLGITLALFLWPSLTLAVNSNWGGPESSAKREWFASTTIDLITENPDADADWIEEFLLNVMFDEFEVNVEDDSAFDVAE 110
                 889***************************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (210 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       843  (0.0470188); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1591.80
//
Query:       KHJ34850.1  [L=393]
Description: putative bsd domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-13   49.9   0.2    4.7e-13   48.9   0.2    1.6  1  BSD       BSD domain


Domain annotation for each model (and alignments):
>> BSD  BSD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.9   0.2   2.6e-17   4.7e-13       1      57 [.     230     286 ..     230     287 .. 0.96

  Alignments for each domain:
  == domain 1  score: 48.9 bits;  conditional E-value: 2.6e-17
         BSD   1 wdnkfkld.kteeiaqsllkedpeLrklynelVPskvseeqFWsrYfyllrahaieee 57 
                 w+ +f+++  te i++ l +  peLr  +++lVP+ v++ +FW+rY +l++ ++++e+
  KHJ34850.1 230 WKTSFNVEeNTEAISKYLKT-FPELRISMEKLVPDIVPYVDFWTRYHFLRHTIETAEA 286
                 8999****999999999999.**********************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1090  (0.0607954); expected 358.6 (0.02)
Passed bias filter:                      556  (0.0310112); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.21s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 3008.04
//
Query:       KHJ34851.1  [L=195]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (195 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1041  (0.0580624); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1391.53
//
Query:       KHJ34852.1  [L=328]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.11   11.9   0.0       0.19   11.2   0.0    1.3  1  Casc1     Cancer susceptibility candidate 1


Domain annotation for each model (and alignments):
>> Casc1  Cancer susceptibility candidate 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   1.1e-05      0.19      36      89 ..      81     136 ..      69     155 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 1.1e-05
       Casc1  36 idep.....ivDiedslireWllqldieneiifsletklvryelyiskkeeeeakaarg 89 
                 + +p     i  i +  +r+W ++l i  +ii+s+++ l+++++ i+k   ee +a+++
  KHJ34852.1  81 AFFPkeladIIAIRQRRERTWHARLLICTTIISSIDSTLANFQDEIEK---EEVVAFKA 136
                 444455333666777889*****************************4...66666666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2392.61
//
Query:       KHJ34853.1  [L=452]
Description: putative glycoside hydrolase family 76 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   7.7e-155  515.9   7.4   9.6e-155  515.6   7.4    1.0  1  Glyco_hydro_76  Glycosyl hydrolase family 76
  ------ inclusion threshold ------
      0.021   13.9   7.4       0.15   11.1   0.1    2.7  3  Glyco_hydro_88  Glycosyl Hydrolase Family 88
       0.19   11.4   0.1        0.8    9.3   0.0    1.9  2  DUF2334         Uncharacterized protein conserved in bacteria


Domain annotation for each model (and alignments):
>> Glyco_hydro_76  Glycosyl hydrolase family 76
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  515.6   7.4  1.6e-158  9.6e-155       1     358 [.      28     385 ..      28     396 .. 0.98

  Alignments for each domain:
  == domain 1  score: 515.6 bits;  conditional E-value: 1.6e-158
                     SXHHHHHHHHHHHHHHCETTECCTCTCBSCES-GHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHCCCTCEE-SSSTTCTCSSEHHHHHHHHHH CS
  Glyco_hydro_76   1 siksaaatiakgllkyYkgnesggtpgnlpdpyywWeagalfgalidywrltgdstyndlitqallaqagenydympanqsrtegnDDqafwgla 95 
                     siksaa+t+a++l+++Y gn +gg+pg+lp+pyywW  g l+++++dyw++tgd+tyn+++ qal +q g+n+dymp+nq+++egnDDq+fwg+a
      KHJ34853.1  28 SIKSAASTVAFDLMSLYPGNLTGGIPGILPPPYYWWVGGGLMMTMLDYWHYTGDETYNNVVAQALSFQVGPNNDYMPPNQTKNEGNDDQGFWGMA 122
                     79********************************************************************************************* PP

                     HHHHHHH......H--HHHHHHHHHHHHHHHHCB-SCSCCS-BBSEC..ESS--SEEEHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHH CS
  Glyco_hydro_76  96 amtaaernfpep.tdepswLalAqavfntqasrwdeetcgGGlrWqiftwnsgydyknsisngplfqlaarLarytgnetYlewAekvwdWvedv 189
                     am aae+nf++p +dep+wLalAqavfnt+ +rwdeetcgGGlrWqif++n+g +yknsi+ng+lf+l+arLarytgn+tY+ewAekvw+W +++
      KHJ34853.1 123 AMLAAETNFQNPpKDEPQWLALAQAVFNTMTARWDEETCGGGLRWQIFPFNKGFTYKNSIANGCLFNLGARLARYTGNNTYAEWAEKVWAWEVST 217
                     *********************************************************************************************** PP

                     SCSBTTTS-B-SEEETTTCCEEEE---HHHHHHHHHHHHHHHHHHH.--HHHHHHHHHHHHHHHHHCEECTTEEEEEE-TTSTTCCTTHHHHHHH CS
  Glyco_hydro_76 190 gliddedwlvyDgasvednctdinklqwtYnqGtylsgaaylynaT.gdekWldrvkgllnatlstffpdgnilyevacepsekcnnDqrsFkgi 283
                     g+i ded+++yDga +e+ c+ ++klqw+Yn+G++l+gaa+lyn+T g+++W++rv+g+l+a+  +ff+d  il e+ace+ ++cn Dq +Fk++
      KHJ34853.1 218 GFI-DEDYNIYDGAPIEESCKVLDKLQWSYNAGIFLHGAAHLYNYTnGSDVWKTRVQGILDASHIFFFND--ILEEQACEQIDRCNVDQLTFKAY 309
                     ***.***********************************************************8888888..*********999*********** PP

                     HHHHHHHHH..SHHHHHHHHHHHHHHHHHHHTTTB...TTTSB-TTTTT.SSCCHHHHHHHHCCHHH......... CS
  Glyco_hydro_76 284 larwlaltaqlapetadtiepllrasaeaaakscsggsdgttcglkwlk.gtwdgdaglgeqmsaleviqallvee 358
                     +++wla+t+ +ap+t+++i pll +sa+aaak c+gg+++  c+ kw++  + +g++++g qmsal++iq +l++ 
      KHJ34853.1 310 FSSWLASTSLIAPFTSEKILPLLGNSAKAAAKVCDGGKSKSICSNKWSTdVSSNGTTNVGYQMSALSAIQTSLLQV 385
                     ************************************************735589999**************99975 PP

>> Glyco_hydro_88  Glycosyl Hydrolase Family 88
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   1.9    0.0019        11      29      63 ..      63      97 ..      54     209 .. 0.73
   2 ?   -0.5   0.1     0.086   5.1e+02      31      59 ..     184     212 ..     144     228 .. 0.70
   3 ?   11.1   0.1   2.5e-05      0.15      21      52 ..     238     269 ..     225     312 .. 0.76

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0019
                    HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCCC CS
  Glyco_hydro_88 29 wtnGvflsglleayeatgdkeyldyakawadslid 63
                    w  G ++  +l+++ +tgd++y +++++  + ++ 
      KHJ34853.1 63 WVGGGLMMTMLDYWHYTGDETYNNVVAQALSFQVG 97
                    888889999***************99986555443 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.086
                     HHHHHHHHHHHHHHH--HHHHHHHHHHHH CS
  Glyco_hydro_88  31 nGvflsglleayeatgdkeyldyakawad 59 
                     nG +++  ++++ +tg+++y ++a++   
      KHJ34853.1 184 NGCLFNLGARLARYTGNNTYAEWAEKVWA 212
                     34444444578999999999999987443 PP

  == domain 3  score: 11.1 bits;  conditional E-value: 2.5e-05
                     SSTTCCE.HHHHHHHHHHHHHHHHH--HHHHH CS
  Glyco_hydro_88  21 lkkenewewtnGvflsglleayeatgdkeyld 52 
                     + ++ +w ++ G+fl g +++y++t+ +++ +
      KHJ34853.1 238 VLDKLQWSYNAGIFLHGAAHLYNYTNGSDVWK 269
                     55788*********************998655 PP

>> DUF2334  Uncharacterized protein conserved in bacteria (DUF2334)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0      0.16   9.5e+02     125     158 ..      77     119 ..      72     154 .. 0.71
   2 ?    9.3   0.0   0.00013       0.8      47      85 ..     225     265 ..     213     312 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.16
     DUF2334 125 hyaaseetykalkkyfsiiyerykeyk..gq.......keglt 158
                 hy+ +e+ ++++++ +s+ + ++++y   +q       ++g++
  KHJ34853.1  77 HYTGDETYNNVVAQALSFQVGPNNDYMppNQtknegndDQGFW 119
                 9999999999999999999988665555633344555644443 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00013
     DUF2334  47 skvnlsenpefvevLkylq.akGgeialHGYtHqygtvk.s 85 
                 + ++ +  +e ++vL++lq + ++ i+lHG  H y+ ++ s
  KHJ34853.1 225 NIYDGAPIEESCKVLDKLQwSYNAGIFLHGAAHLYNYTNgS 265
                 55666778899********999*************865552 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       423  (0.0235931); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3408.67
//
Query:       KHJ34854.1  [L=386]
Description: putative dna binding regulatory protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.7e-09   35.9  12.4    0.00033   20.9   3.8    2.7  2  zf-C2H2      Zinc finger, C2H2 type
    9.2e-06   25.9   5.3    9.2e-06   25.9   5.3    2.8  3  zf-H2C2_2    Zinc-finger double domain
     0.0016   19.1  12.2       0.12   13.2   3.3    2.7  2  zf-C2H2_4    C2H2-type zinc finger
  ------ inclusion threshold ------
      0.066   13.5   0.3       0.22   11.9   0.3    2.0  1  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
       0.54   10.7   6.0       0.16   12.4   0.9    2.5  2  zf-met       Zinc-finger of C2H2 type
       0.54    9.9   4.6        2.9    7.6   0.2    2.7  2  zf_C2H2_ZHX  Zinc-fingers and homeoboxes C2H2 finger domain


Domain annotation for each model (and alignments):
>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   3.8   1.1e-07   0.00033       1      23 []      64      86 ..      64      86 .. 0.97
   2 !   19.5   1.4   3.2e-07   0.00094       1      23 []      92     115 ..      92     115 .. 0.97

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 1.1e-07
                EEETTTTEEESSHHHHHHHHHCC CS
     zf-C2H2  1 ykCpdCgksFkrksnLkrHirtH 23
                ++C+ C +sF r ++LkrH r+H
  KHJ34854.1 64 HVCGTCQRSFARLEHLKRHERSH 86
                79********************9 PP

  == domain 2  score: 19.5 bits;  conditional E-value: 3.2e-07
                 EEETTTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                 ++C dC ++F r+++L rH+++ H
  KHJ34854.1  92 FECADCLRCFARSDLLLRHQQKlH 115
                 89*******************999 PP

>> zf-H2C2_2  Zinc-finger double domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.1     0.017        50      11      25 ..      60      74 ..      57      75 .. 0.87
   2 !   25.9   5.3   3.1e-09   9.2e-06       1      25 [.      78     102 ..      78     103 .. 0.94
   3 ?   -2.8   0.2       3.5     1e+04       2       9 ..     107     115 ..     107     119 .. 0.71

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.017
   zf-H2C2_2 11 gekpyeCplCdkaFk 25
                +++p+ C  C  +F+
  KHJ34854.1 60 KPRPHVCGTCQRSFA 74
                5789*********97 PP

  == domain 2  score: 25.9 bits;  conditional E-value: 3.1e-09
   zf-H2C2_2   1 nLrrHirkHtgekpyeCplCdkaFk 25 
                 +L+rH r+Ht+ekp+eC  C   F+
  KHJ34854.1  78 HLKRHERSHTKEKPFECADCLRCFA 102
                 79*******************9997 PP

  == domain 3  score: -2.8 bits;  conditional E-value: 3.5
   zf-H2C2_2   2 LrrHirk.H 9  
                 L rH+ k H
  KHJ34854.1 107 LLRHQQKlH 115
                 569987668 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.2   3.3   4.2e-05      0.12       1      23 [.      64      86 ..      64      87 .. 0.94
   2 !   10.4   1.6   0.00033      0.97       1      24 []      92     115 ..      92     115 .. 0.96

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 4.2e-05
   zf-C2H2_4  1 fkCpiCgksFsskkaLlrHlkth 23
                + C  C++sF + ++L+rH ++h
  KHJ34854.1 64 HVCGTCQRSFARLEHLKRHERSH 86
                57********************9 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.00033
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHlkthH 24 
                 f+C  C + F +++ LlrH ++ H
  KHJ34854.1  92 FECADCLRCFARSDLLLRHQQKLH 115
                 89******************9988 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.3   7.2e-05      0.22       2      24 ..      64      86 ..      63      88 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 7.2e-05
                 CBBTTTTBBBSSHHHHHCCTTSH CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHlkSK 24
                 + C +C++ F   + l+ H++S+
   KHJ34854.1 64 HVCGTCQRSFARLEHLKRHERSH 86
                 679*******************6 PP

>> zf-met  Zinc-finger of C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.9   5.3e-05      0.16       2      23 ..      65      86 ..      64      87 .. 0.94
   2 ?   -0.1   0.3      0.47   1.4e+03       1      20 [.      92     111 ..      92     112 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.3e-05
      zf-met  2 yCelCnvtfnsesqlksHlqGK 23
                 C  C+++f    +lk H +++
  KHJ34854.1 65 VCGTCQRSFARLEHLKRHERSH 86
                5*******************98 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.47
      zf-met   1 fyCelCnvtfnsesqlksHl 20 
                 f+C  C + f     l  H 
  KHJ34854.1  92 FECADCLRCFARSDLLLRHQ 111
                 78*****9999988888886 PP

>> zf_C2H2_ZHX  Zinc-fingers and homeoboxes C2H2 finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.7     0.014        43       6      31 ..      65      89 ..      62      93 .. 0.85
   2 ?    7.6   0.2   0.00098       2.9       5      43 ..      92     130 ..      88     132 .. 0.90

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.014
  zf_C2H2_ZHX  6 vCveCsfsakkfegLalHNarsHpge 31
                 vC  C+ s  + e L+ H  rsH+ e
   KHJ34854.1 65 VCGTCQRSFARLEHLKRH-ERSHTKE 89
                 9*****************.5777755 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00098
  zf_C2H2_ZHX   5 FvCveCsfsakkfegLalHNarsHpgetnftlqvvKrdn 43 
                  F C++C     + + L  H  + H ++t  +   +++d+
   KHJ34854.1  92 FECADCLRCFARSDLLLRHQQKLHLAQTASSRPRNRKDS 130
                  89*************************999999888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (386 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       558  (0.0311228); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.47u 0.20s 00:00:00.67 Elapsed: 00:00:00.37
# Mc/sec: 3161.26
//
Query:       KHJ34855.1  [L=352]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2676.25
//
Query:       KHJ34856.1  [L=164]
Description: hypothetical protein EV44_g3829 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0023   17.9   0.9     0.0033   17.4   0.9    1.2  1  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.9   1.8e-07    0.0033       2      13 ..     121     132 ..     120     134 .. 0.90

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1.8e-07
                 CTSSSSSSSSTT CS
     zf-CCHC   2 kCynCGepGHia 13 
                  Cy+C++ GH+a
  KHJ34856.1 121 RCYRCNQSGHLA 132
                 7*********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (164 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1206.28
//
Query:       KHJ34857.1  [L=134]
Description: putative sucrose transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.017   15.2   0.0      0.024   14.7   0.0    1.2  1  DUF2200   Uncharacterized protein conserved in bacteria (DUF2


Domain annotation for each model (and alignments):
>> DUF2200  Uncharacterized protein conserved in bacteria (DUF2200)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.0   1.4e-06     0.024      52      92 ..      85     125 ..      73     132 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.4e-06
     DUF2200  52 tfeeffeeapklnpnaslikGviCgvrveeiedplmkkiRy 92 
                  f++ff+eap+  p++ ++kG++   rv + ++ l + +R+
  KHJ34857.1  85 PFSTFFHEAPHDWPREYRVKGSVLSQRVPNDTKLLAQMVRC 125
                 589**************************999999999995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       237  (0.0132188); expected 358.6 (0.02)
Passed bias filter:                      218  (0.0121591); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1050.68
//
Query:       KHJ34858.1  [L=895]
Description: hypothetical protein EV44_g1285 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.8e-78  262.0   0.1    1.4e-77  261.2   0.1    1.4  1  Syja_N    SacI homology domain
  ------ inclusion threshold ------
      0.076   13.4   0.1        7.2    7.0   0.0    2.4  2  AFT       Transcription factor AFT


Domain annotation for each model (and alignments):
>> Syja_N  SacI homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  261.2   0.1   1.6e-81   1.4e-77       2     319 ..      94     411 ..      93     412 .. 0.85

  Alignments for each domain:
  == domain 1  score: 261.2 bits;  conditional E-value: 1.6e-81
      Syja_N   2 gilGlirllsgsyllvitkreevgtlkgkkeiykitevellplsseeeaekalkslkaktekkkeekeleekllklleklfessgsfYFsydlDltrsl 100
                 g+lG+i++   +y+l++tkr++ + ++g+ +iy+i+ +e++pl++     k+  +      ++ +  e e+++l++l +++  ++sfYFsy++D+tr+l
  KHJ34858.1  94 GLLGFIQFTGAYYMLIVTKRSQRAMIGGH-YIYSIDGTEIIPLTTG---IKSRFK------SEARTPE-EARFLSIL-NNLDLTRSFYFSYSYDITRTL 180
                 99*****9999**************9665.************9654...222222......2334555.999**999.8999***************** PP

      Syja_N 101 qrqleks......sesskslplweraderFvWNrhllkpliea..eldswllpviqGfveqsklklsksqkekekkevtltlisRrsrkraGtRylrRG 191
                 q++  ++       ++++     + +++ FvWN++llkp++++   + sw+lpvi+G++ qs l          +++v +tli+Rrsr++aG+R+l+RG
  KHJ34858.1 181 QHNIITErtsiaqGNPFP---HNQDYNSMFVWNYNLLKPCLDKfkCTYSWCLPVIHGYIDQSVLY-------IYGRTVFITLIARRSRYFAGARFLKRG 269
                 ****99877654433444...45788999**********885556789***********777764.......35789********************** PP

      Syja_N 192 iddeGnvANfvEtEqile.ves............sekeskilSfvqiRGSiPlfWsqeptlky.kpkirierseeenleafkkHfekllkrYg.kvvvv 275
                 ++d G+vAN vEtEqi++ v              s++  +++S+vq+RGSiPl+W+q++t    kp+i+++   +   +a++ Hf++l++rYg +++v+
  KHJ34858.1 270 ANDRGYVANDVETEQIVSeV-LttsfhapgpklySNP--NYTSYVQHRGSIPLYWTQDNTGVTpKPPIELN-LVDPFYTAAALHFDNLFERYGtPIYVL 364
                 ******************44.369********75444..79****************99755578888885.7777999**************99**** PP

      Syja_N 276 nLl...ekkgrEkkLgeayekavkklnk.lekekkklkyveFDfhkec 319
                 nL+   e+ +rE+kL +++++a+++ln+ l+ + +k+ + ++D++++ 
  KHJ34858.1 365 NLVksrERMPRESKLLHEFTEAINYLNQfLTVD-QKIIHKAWDMSRAS 411
                 ***77666788****************988655.99********9876 PP

>> AFT  Transcription factor AFT
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.0   0.00081       7.2      75     108 ..     672     707 ..     654     710 .. 0.80
   2 ?    3.8   0.0    0.0082        74       4      51 ..     729     776 ..     726     802 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00081
                 XXXXXXX----EEEEEEE..TTTTEEEEEEEE---S CS
         AFT  75 ravsrynsCPfrvratys..lkrkkWsivvvnnehs 108
                  ++++yn  Pf vr+++   lkr k ++ + n  h+
  KHJ34858.1 672 PTQGPYNFSPFTVRTNFDheLKRLKKEVTITNTIHE 707
                 567899**********96337788889999999997 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.0082
                 GGGHHHHHHHHHGGGT--EEEEEEETTEEEEEE---XXXXXXXX.... CS
         AFT   4 ksdikpWLqkifypqGieiviersDslkivfkCkaakkkrkasekske 51 
                 +  ++ WLq i+ +   + vi+ s +  +  k  a +k r a+ + ++
  KHJ34858.1 729 RISLQRWLQPIQDRSQTNRVIKESQAHDVNQKATALDKGRAAQWTFTQ 776
                 556789***********************9999999999987765544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (895 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       573  (0.0319594); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.30s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 5935.39
//
Query:       KHJ34859.1  [L=112]
Description: hypothetical protein EV44_g3568 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.022   14.6   0.0      0.037   13.9   0.0    1.4  1  gag_pre-integrs  GAG-pre-integrase domain
      0.088   12.4   0.0       0.13   11.8   0.0    1.3  1  DUF594           Protein of unknown function, DUF594


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   4.1e-06     0.037      24      51 ..      13      40 ..      10      61 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.1e-06
  gag_pre-integrs 24 inlWHrRLGHpsfsrlkkLfkkgllpgl 51
                     ++ WH  L+Hp +s+ +k  +  +++++
       KHJ34859.1 13 FDFWHETLCHPAESSFEKTKPLTINSNI 40
                     578****************996665554 PP

>> DUF594  Protein of unknown function, DUF594
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.5e-05      0.13       4      27 ..       4      27 ..       1      33 [. 0.83

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.5e-05
      DUF594  4 deeerWevlaevWvemLlyaApsc 27
                +e +   ++ ++W e L++ A+s+
  KHJ34859.1  4 EEHDNVGLIFDFWHETLCHPAESS 27
                56677789***********99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (112 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       294  (0.016398); expected 358.6 (0.02)
Passed bias filter:                      216  (0.0120475); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.41
# Mc/sec: 816.53
//
Query:       KHJ34860.1  [L=1120]
Description: putative rna binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.6e-30  100.9   0.1      9e-06   25.1   0.0    6.3  6  PUF       Pumilio-family RNA binding repeat
    3.9e-11   42.6   0.0    8.7e-11   41.5   0.0    1.6  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
  ------ inclusion threshold ------
       0.14   12.1   0.1       0.25   11.2   0.1    1.3  1  LodA_N    L-Lysine epsilon oxidase N-terminal


Domain annotation for each model (and alignments):
>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   1.5e-09     9e-06       2      33 ..     645     676 ..     644     678 .. 0.89
   2 !   15.8   0.0   1.4e-06    0.0081       2      34 ..     681     713 ..     680     715 .. 0.81
   3 !   23.6   0.0   4.6e-09   2.8e-05       3      34 ..     719     749 ..     718     750 .. 0.83
   4 !   14.6   0.0   3.2e-06     0.019       2      35 .]     753     787 ..     752     787 .. 0.87
   5 !   12.7   0.0   1.3e-05     0.076       7      35 .]     796     824 ..     793     824 .. 0.94
   6 ?    0.1   0.0      0.13   7.8e+02       2      14 ..     828     840 ..     827     841 .. 0.88

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 1.5e-09
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkkl 33 
                 i++++ +Ls+d  Gn vvQkl+eh++ + ++ 
  KHJ34860.1 645 ILPEIFELSSDYLGNTVVQKLFEHCSDNVRDI 676
                 789*********************99877665 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 1.4e-06
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkkli 34 
                 i +++ ++ ++++G+++ Qk++++++++ ++++
  KHJ34860.1 681 IAPHIAEIGVHKNGTWAAQKIIDVCKTPKQMNM 713
                 779999******************666655544 PP

  == domain 3  score: 23.6 bits;  conditional E-value: 4.6e-09
                 GGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   3 kgnlvqLstdqyGnyvvQkllehateeqkkli 34 
                 +++ v L  dqyGnyv+Q++l+ ++++  ++i
  KHJ34860.1 719 QPYAVPLFLDQYGNYVLQCCLK-FGSPFNDFI 749
                 68999999*************9.666666666 PP

  == domain 4  score: 14.6 bits;  conditional E-value: 3.2e-06
                 HGGGHHHHHTSTTHHHHHHHHHHH.SCHHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQklleh.ateeqkklil 35 
                 ++   +++++ +yG+++++ +le  + +++++++l
  KHJ34860.1 753 MLSQMWEIAQGRYGARAMRACLEShHATKEQQRML 787
                 667789******************98888888775 PP

  == domain 5  score: 12.7 bits;  conditional E-value: 1.3e-05
                 HHHHTSTTHHHHHHHHHHHSCHHHHHHHH CS
         PUF   7 vqLstdqyGnyvvQkllehateeqkklil 35 
                 vqL+t  +G+ ++ +ll+++t +q++++l
  KHJ34860.1 796 VQLATSANGALLLTWLLDTCTFPQRRSVL 824
                 79***********************9875 PP

  == domain 6  score: 0.1 bits;  conditional E-value: 0.13
                 HGGGHHHHHTSTT CS
         PUF   2 ikgnlvqLstdqy 14 
                 ++++lv L+t++ 
  KHJ34860.1 828 LIPHLVHLCTHKV 840
                 79*********96 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.0   1.5e-14   8.7e-11       1      64 [.     441     499 ..     441     501 .. 0.96

  Alignments for each domain:
  == domain 1  score: 41.5 bits;  conditional E-value: 1.5e-14
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkkl 64 
                 l++g +p ++t ++L e+F++ Gpi s+++ +     +k+++fV+Fe  e+A +A++ +ngk++
  KHJ34860.1 441 LWLGSIPLSTTVSTLTEMFKPHGPIISARVLT-----HKNCGFVNFERLESAISAKALMNGKEI 499
                 67899***************************.....6***********************997 PP

>> LodA_N  L-Lysine epsilon oxidase N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   4.2e-05      0.25      38     111 ..     294     373 ..     271     417 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4.2e-05
                 S-B-EEEEEEEEEET.............TSEEE-TTSTTEEEEEEEEEEEE-GGGSB---TTTGG-GGGSTTTT--BTTTT- CS
      LodA_N  38 grlkrqaarFriyaydeeg........evvreltldekevakieWtvhlankKaawyefeealdipeaksaesesklrNadv 111
                  ++ +qa rFr y +++++         v+ ++t    e ++ + + +la + aa+ + + a +  ++++ +s+++ r a +
  KHJ34860.1 294 ANITKQANRFRSYSVNAKEkyaedeeeYVTGNMT--PFEAQQAQLHMQLAATHAAIQQHNLAVQAYASQASASRPRARTAGI 373
                 5799***********9999888777544444444..566677778899*******999998884444443345666665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       451  (0.0251548); expected 358.6 (0.02)
Passed bias filter:                      323  (0.0180155); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.21s 00:00:00.92 Elapsed: 00:00:00.39
# Mc/sec: 8706.32
//
Query:       KHJ34861.1  [L=400]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       664  (0.037035); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.22s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2943.88
//
Query:       KHJ34862.1  [L=606]
Description: putative erythromycin esterase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (606 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       920  (0.0513135); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.23s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 4587.37
//
Query:       KHJ34863.1  [L=223]
Description: hypothetical protein EV44_g4357 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (223 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       301  (0.0167884); expected 358.6 (0.02)
Passed bias filter:                      261  (0.0145574); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1650.72
//
Query:       KHJ34864.1  [L=1047]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.5e-84  282.4   0.1    5.6e-84  281.3   0.1    1.6  1  Hira         TUP1-like enhancer of split
    8.9e-22   77.0  33.5    8.8e-05   23.2   0.0   10.0 11  WD40         WD domain, G-beta repeat
    7.9e-14   51.7   0.0      0.025   14.9   0.0    6.3  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    9.8e-13   47.6   1.0    2.3e-12   46.5   1.0    1.7  1  HIRA_B       HIRA B motif
    0.00011   21.3   1.6      0.039   12.9   0.0    4.7  6  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
  ------ inclusion threshold ------
       0.12   12.4   1.5         22    5.1   0.0    4.4  5  PD40         WD40-like Beta Propeller Repeat


Domain annotation for each model (and alignments):
>> Hira  TUP1-like enhancer of split
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  281.3   0.1   1.9e-87   5.6e-84       1     221 [.     740     977 ..     740     978 .. 0.99

  Alignments for each domain:
  == domain 1  score: 281.3 bits;  conditional E-value: 1.9e-87
        Hira   1 GrrllPplvlespasfLessgsyLlavtsvgllyvWnvkkkkvllppvslapllssssrssekeltrapavtsasltsnGvpivtlsngdgylydkslk 99 
                 Grrll+ lvle++++++e+++ +Ll++t+vg++yvWnvk+ ++++ppvsl p+l+ + ++  + +t+ap +tsa+l+s+G++ivtlsngdgyly+++l 
  KHJ34864.1 740 GRRLLNGLVLEAQPVIIECREFWLLVITAVGMCYVWNVKSVSSPHPPVSLGPILEIAMHTLGTHTTSAPGITSAHLNSSGQIIVTLSNGDGYLYSQNLC 838
                 9************************************************************************************************** PP

        Hira 100 tWlrvsdswwalgsqywdsrdsstsssassas.................gilsalerktneevlrkgrakllqrlaktllekegfenleesvtlahlEn 181
                 +W+r+s++wwa gsqyw+++ds+ ss +s+a                  gi+++ler+t++evl kgra++lqrl k ll kegfen+e+ +++ahlEn
  KHJ34864.1 839 VWQRLSEAWWAAGSQYWNTNDSAMSSLTSKAVgqdsrrssnikstnlsaGIIPHLERHTTSEVLLKGRAYTLQRLIKSLLAKEGFENFESGISIAHLEN 937
                 ***************************99988******************************************************************* PP

        Hira 182 rlaaallLgsadEfkkwllaYakrLaeeglesrlrelcke 221
                 r+aaal+Lg++dEf+ +ll+YakrL++egl+++++el+++
  KHJ34864.1 938 RVAAALQLGAKDEFRIYLLMYAKRLGAEGLKAKIEELLRN 977
                 *************************************985 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.1   1.6e-06    0.0049      11      38 .]      16      45 ..       8      45 .. 0.79
   2 !   16.8   0.1   3.2e-06    0.0096       5      37 ..      64      97 ..      60      98 .. 0.84
   3 !   13.0   0.8   5.1e-05      0.15       2      38 .]     122     159 ..     121     159 .. 0.90
   4 !   23.2   0.0   2.9e-08   8.8e-05       3      37 ..     165     200 ..     163     201 .. 0.93
   5 ?    2.8   0.1     0.083   2.5e+02      15      28 ..     239     252 ..     229     261 .. 0.86
   6 !    8.6   0.1    0.0012       3.5       8      38 .]     277     329 ..     270     329 .. 0.67
   7 !    8.5   0.1    0.0013       3.9      10      34 ..     340     368 ..     334     369 .. 0.81
   8 ?   -3.4   0.0         6   1.8e+04      14      32 ..     512     529 ..     512     530 .. 0.77
   9 ?    1.0   0.1       0.3   8.8e+02      24      37 ..     724     736 ..     695     737 .. 0.82
  10 ?    2.4   0.2      0.11   3.2e+02       4      32 ..     797     830 ..     795     841 .. 0.74
  11 ?   -3.3   0.1         6   1.8e+04      13      38 .]     992    1008 ..     982    1009 .. 0.54

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.6e-06
                SS..EEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40 11 ss..vtslafspdgawlasG.sdDgtvriWd 38
                ++  v+s+ +spdg  la++ + Dg vriW+
  KHJ34864.1 16 KDfeVYSCHVSPDGYRLATAaG-DGYVRIWS 45
                33679*************8836.*******5 PP

  == domain 2  score: 16.8 bits;  conditional E-value: 3.2e-06
                EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37
                 + + H + ++ ++fs +g++lasG dD+ + i+
  KHJ34864.1 64 CHMSYHsGTIHTVRFSLNGRYLASGADDKIICIY 97
                555668444**********************998 PP

  == domain 3  score: 13.0 bits;  conditional E-value: 5.1e-05
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 + ++ l GH ++v +l +  d++ l+s + D ++ +W+
  KHJ34864.1 122 KITKRLIGHeNDVQDLGWAYDSSILVSVGLDSKIVVWS 159
                 5567799*******************9899*******5 PP

  == domain 4  score: 23.2 bits;  conditional E-value: 2.9e-08
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 +l+t++ H s+v +++f+p ++++a++sdD++++i+
  KHJ34864.1 165 KLKTISNHqSHVKGISFDPANKYFATASDDRSIKIF 200
                 789999**999***********************97 PP

  == domain 5  score: 2.8 bits;  conditional E-value: 0.083
                 EEEEETTSSEEEEE CS
        WD40  15 slafspdgawlasG 28 
                  +++spdg+ +a++
  KHJ34864.1 239 RCSWSPDGNHIAAA 252
                 688*******9875 PP

  == domain 6  score: 8.6 bits;  conditional E-value: 0.0012
                 ESS.SS..EEEEE........EETTSSE...........EEEEETTSEEEEEE CS
        WD40   8 tGH.ss..vtsla........fspdgaw...........lasGsdDgtvriWd 38 
                  GH ++  v+ ++         s dg+            +a+++ D+t+ iW+
  KHJ34864.1 277 IGHeGPteVCTFSprllskkeISADGTNnnyslqsfvtvIACAGQDKTLSIWN 329
                 57754455665557777777745555555556677777577789********8 PP

  == domain 7  score: 8.5 bits;  conditional E-value: 0.0013
                 S....SSEEEEEEETTSSEEEEEETTSEE CS
        WD40  10 H....ssvtslafspdgawlasGsdDgtv 34 
                 H    +s+++la+ pdg  ++++s Dg++
  KHJ34864.1 340 HdlagKSISDLAWTPDGLSIFASSLDGSI 368
                 5443346*************99999**98 PP

  == domain 8  score: -3.4 bits;  conditional E-value: 6
                 EEEEEETTSSEEEEEETTS CS
        WD40  14 tslafspdgawlasGsdDg 32 
                 t+l+  p ++++a++s ++
  KHJ34864.1 512 TGLSSLPQSQLMAASS-KN 529
                 6788889999999888.54 PP

  == domain 9  score: 1.0 bits;  conditional E-value: 0.3
                 EEEEEETTSEEEEE CS
        WD40  24 wlasGsdDgtvriW 37 
                 w a++++Dgt++ W
  KHJ34864.1 724 W-AAACEDGTIYTW 736
                 4.55677****988 PP

  == domain 10  score: 2.4 bits;  conditional E-value: 0.11
                 EEEEESS.SS...EEEEEEETTSSEEEE..EETTS CS
        WD40   4 lrtltGH.ss...vtslafspdgawlas..GsdDg 32 
                 ++tl +H +s   +ts   +++g+ +++   + Dg
  KHJ34864.1 797 MHTLGTHtTSapgITSAHLNSSGQIIVTlsNG-DG 830
                 699999*855799****99***9999864213.44 PP

  == domain 11  score: -3.3 bits;  conditional E-value: 6
                  EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   13 vtslafspdgawlasGsdDgtvriWd 38  
                  ++++       w+  +  Dg +  Wd
  KHJ34864.1  992 IRGQ------GWM--SE-DGLLCSWD 1008
                  5555......442..23.66666665 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0   0.00036       1.1      34      71 ..      13      50 ..       5      70 .. 0.79
   2 !    8.4   0.0   0.00088       2.6      37      82 ..      69     114 ..      61     125 .. 0.85
   3 !    7.0   0.2    0.0024       7.3      36      86 ..     129     178 ..     118     182 .. 0.84
   4 !    5.9   0.0    0.0053        16      33      66 ..     168     201 ..     156     205 .. 0.82
   5 ?    2.4   0.0     0.065   1.9e+02       5      58 ..     183     254 ..     179     267 .. 0.60
   6 !   14.9   0.0   8.5e-06     0.025      10      80 ..     316     386 ..     312     394 .. 0.85

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00036
  ANAPC4_WD40 34 edkedsevrsLaWkpdgklLavaysdgevrlldaesgk 71
                  +++d ev s + +pdg  La a  dg vr+ ++e   
   KHJ34864.1 13 GEQKDFEVYSCHVSPDGYRLATAAGDGYVRIWSIEAIL 50
                 5788999**************************99755 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.00088
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksek 82 
                  ++++++ ++++ +g+ La + +d  + +++       hs s ++++
   KHJ34864.1  69 HSGTIHTVRFSLNGRYLASGADDKIICIYHLDANPPAHSASLGTND 114
                  5678999************************999999998887765 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0024
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtc 86 
                  ++++ v++L W  d ++L+ +  d+++ + + ++ + ++++s ++++ v+ 
   KHJ34864.1 129 GHENDVQDLGWAYDSSILVSVGLDSKIVVWSGHTLEKLKTISNHQSH-VKG 178
                  56889**************************9999999999888874.655 PP

  == domain 4  score: 5.9 bits;  conditional E-value: 0.0053
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlld 66 
                  + ++++s+v+++++ p +k +a a +d +++++ 
   KHJ34864.1 168 TISNHQSHVKGISFDPANKYFATASDDRSIKIFR 201
                  457999************************9985 PP

  == domain 5  score: 2.4 bits;  conditional E-value: 0.065
  ANAPC4_WD40   5 ptmDLiAlatedgellvfRlng............qrvwtl..........eedkedsevrsLaWkpdgklLavays 58 
                  p +  +A a++d ++ +fR+n             +    +           ++      r  +W+pdg+ +a a +
   KHJ34864.1 183 PANKYFATASDDRSIKIFRFNPpsasataydslnN----FvlehtivapfVSSPLTTYFRRCSWSPDGNHIAAANA 254
                  66666777888888888888774444444444431....0333344333455555666677888888888887755 PP

  == domain 6  score: 14.9 bits;  conditional E-value: 8.5e-06
  ANAPC4_WD40  10 iAlatedgellvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvks 80 
                  iA a +d+ l +  ++  r   + +d  ++++++LaW pdg  +  +  dg++  l+ e+g++ h  + ++
   KHJ34864.1 316 IACAGQDKTLSIWNTSSSRPLMVCHDLAGKSISDLAWTPDGLSIFASSLDGSIVALNFEKGEIGHIAPWSE 386
                  7777778888888888877777788999**********************************998776655 PP

>> HIRA_B  HIRA B motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.5   1.0   7.7e-16   2.3e-12       1      22 [.     489     510 ..     489     511 .. 0.97

  Alignments for each domain:
  == domain 1  score: 46.5 bits;  conditional E-value: 7.7e-16
      HIRA_B   1 KQkvTitKdGKKRVaPtLiSss 22 
                 KQ+vTitKdGKKRVaP+L+Sss
  KHJ34864.1 489 KQRVTITKDGKKRVAPLLVSSS 510
                 9********************9 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.9   0.0   1.3e-05     0.039     189     226 ..      19      57 ..      10      97 .. 0.82
   2 ?   -0.0   0.0      0.11   3.3e+02      63      97 ..     129     162 ..     120     189 .. 0.79
   3 ?   -1.1   0.0      0.24   7.2e+02     184     215 ..     169     201 ..     162     206 .. 0.84
   4 ?   -1.4   0.0       0.3     9e+02     245     276 ..     301     332 ..     234     341 .. 0.64
   5 ?   -0.8   0.1       0.2   5.9e+02     189     211 ..     346     368 ..     309     372 .. 0.75
   6 ?    1.4   0.0     0.042   1.3e+02     146     210 ..     763     831 ..     757     838 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.3e-05
    Ge1_WD40 189 liveaafspdGtalatasedGevkffqvyle.deeeprC 226
                 ++ +  +spdG  lata+ dG+v+ + +    ++ +p C
  KHJ34864.1  19 EVYSCHVSPDGYRLATAAGDGYVRIWSIEAIlQAGDPNC 57 
                 6788999*******************9975534445555 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.11
    Ge1_WD40  63 glkgevldlafahvsskillavdekgslfvykvee 97 
                 g +++v+dl +a+ +s+il++v   ++++v++ ++
  KHJ34864.1 129 GHENDVQDLGWAY-DSSILVSVGLDSKIVVWSGHT 162
                 567999*****99.567899999999999997554 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.24
    Ge1_WD40 184 ieeh.sliveaafspdGtalatasedGevkffq 215
                 i++h s++   +f p     atas d  +k f+
  KHJ34864.1 169 ISNHqSHVKGISFDPANKYFATASDDRSIKIFR 201
                 555536899999******************997 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 0.3
    Ge1_WD40 245 dnhkeesdeqfWrfaitgadnnselklWscel 276
                 d  +++   q +  +i++a +++ l +W++++
  KHJ34864.1 301 DGTNNNYSLQSFVTVIACAGQDKTLSIWNTSS 332
                 55555555666667788888888888888765 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 0.2
    Ge1_WD40 189 liveaafspdGtalatasedGev 211
                  i++ a++pdG ++ ++s dG +
  KHJ34864.1 346 SISDLAWTPDGLSIFASSLDGSI 368
                 58888899999999999999976 PP

  == domain 6  score: 1.4 bits;  conditional E-value: 0.042
    Ge1_WD40 146 llvltrgdkaeiwsvdmiaskygsgelsve.eieegllkieehs..liveaafspdGtalatase.dGe 210
                 llv+t      +w+v+ ++s +   +l +  ei   +l  + +s   i++a + + G  + t s+ dG+
  KHJ34864.1 763 LLVITAVGMCYVWNVKSVSSPHPPVSLGPIlEIAMHTLGTHTTSapGITSAHLNSSGQIIVTLSNgDGY 831
                 799999999*************99877663123333333333332269*****9999988775532775 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.36   1.1e+03      16      24 ..      25      33 ..      25      44 .. 0.89
   2 ?   -1.1   0.0      0.65   1.9e+03       7      24 ..      69      86 ..      66      86 .. 0.87
   3 ?   -2.6   0.0         2   5.9e+03       1      18 [.     166     183 ..     166     193 .. 0.83
   4 ?    5.1   0.0    0.0073        22      15      24 ..     241     250 ..     240     250 .. 0.90
   5 ?    1.2   0.2      0.12   3.6e+02      15      23 ..     351     359 ..     345     363 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.36
                E-TTSSEEE CS
        PD40 16 fSPDGkrla 24
                +SPDG rla
  KHJ34864.1 25 VSPDGYRLA 33
                59***9997 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.65
                SSS.EEEEEE-TTSSEEE CS
        PD40  7 tpgnegaPsfSPDGkrla 24
                ++g ++  +fS +G++la
  KHJ34864.1 69 HSGTIHTVRFSLNGRYLA 86
                68889999********97 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 2
                 EEE--SSSS.EEEEEE-T CS
        PD40   1 lkrltntpgnegaPsfSP 18 
                 lk + n++++  ++sf+P
  KHJ34864.1 166 LKTISNHQSHVKGISFDP 183
                 578999999999999999 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.0073
                 EE-TTSSEEE CS
        PD40  15 sfSPDGkrla 24 
                 s+SPDG+ +a
  KHJ34864.1 241 SWSPDGNHIA 250
                 8*****9886 PP

  == domain 5  score: 1.2 bits;  conditional E-value: 0.12
                 EE-TTSSEE CS
        PD40  15 sfSPDGkrl 23 
                 +++PDG ++
  KHJ34864.1 351 AWTPDGLSI 359
                 8*****988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1047 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.76u 0.27s 00:00:01.03 Elapsed: 00:00:00.46
# Mc/sec: 6898.23
//
Query:       KHJ34865.1  [L=411]
Description: putative spfh domain band 7 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-32  112.3   0.1    5.3e-32  111.3   0.1    1.5  1  Band_7    SPFH domain / Band 7 family
    3.9e-22   78.1   1.3    9.4e-22   76.9   1.3    1.7  1  Band_7_C  C-terminal region of band_7
  ------ inclusion threshold ------
      0.014   14.7   0.3      0.022   14.1   0.3    1.3  1  Pox_A11   Poxvirus A11 Protein


Domain annotation for each model (and alignments):
>> Band_7  SPFH domain / Band 7 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.3   0.1   8.9e-36   5.3e-32       3     177 ..      85     254 ..      83     255 .. 0.98

  Alignments for each domain:
  == domain 1  score: 111.3 bits;  conditional E-value: 8.9e-36
      Band_7   3 ieegevgvvvrfGklsrvlepGlhfilPfgrsvt.vvsvrvqtldvsvsltvptkDglpvtidvtviyrvpddapklvaaveresanldnlirrvlesa 100
                 ++++ + +v+r Gk +r+lepGl + +Pf+++++ v s++   ++++  ++++t+D++ + +d++++ rv  da k+++ v    ++ d  i+++++ a
  KHJ34865.1  85 VPQQTAWIVERMGKFNRILEPGLAILWPFLDRIAyVKSLKENAIEIPS-QSAITADNVTLELDGVLYTRV-FDAYKASYGV----EDADYAISQLAQTA 177
                 8999******************************777889********.*********************.**********....************** PP

      Band_7 101 lrevisemtleellsnreelaeelknelneqlrkyGvevldvritdidpppevaqalaakqaaeaeaqaeiaraeae 177
                  r+ i++mtl+ +l++r++l+  +++ +ne+++ +Gv +l+  i+di+ p+ v +a+++  +ae+ ++aei ++e++
  KHJ34865.1 178 MRSEIGQMTLDHVLKERAALNTHITASINEAAQDWGVVCLRYEIRDIHAPDGVVEAMHRQVTAERSKRAEILESEGQ 254
                 *************************************************************************9987 PP

>> Band_7_C  C-terminal region of band_7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.9   1.3   1.6e-25   9.4e-22       2      61 ..     304     365 ..     303     367 .. 0.95

  Alignments for each domain:
  == domain 1  score: 76.9 bits;  conditional E-value: 1.6e-25
    Band_7_C   2 kvaeaikkp..ggqeAvsLrvAeqYveaFgkLAkesntvilPanvgdvssmvaqalsiykkv 61 
                 +va++i+k   ++++A+sL+vAe+YveaF++LAk+++ v++P+nvgd++sm+a+al++y+k+
  KHJ34865.1 304 VVAASIEKGssSAKSAISLSVAEKYVEAFAQLAKKGTAVVVPGNVGDLGSMIASALAVYGKL 365
                 6999***999999**********************************************997 PP

>> Pox_A11  Poxvirus A11 Protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.3   3.7e-06     0.022      70     131 ..     221     282 ..     164     294 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 3.7e-06
     Pox_A11  70 iPgedsPvtiiervsPqtklvddaaeseiilaeqqrqqrvnikvsekeavi.ekepiettkit 131
                 i + + P+ ++e ++ q++  ++++++ei+ +e qrq  +ni    k++vi  +e++++ +i 
  KHJ34865.1 221 IRDIHAPDGVVEAMHRQVT-AERSKRAEILESEGQRQSAINIAEGRKQSVIlASEALKSEQIN 282
                 455689*********9999.888899*****************99777765267777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       765  (0.0426683); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3135.88
//
Query:       KHJ34866.1  [L=711]
Description: putative alpha beta hydrolase fold-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      4e-07   29.9   0.0    1.1e-06   28.5   0.0    1.7  1  Abhydrolase_1  alpha/beta hydrolase fold
    8.5e-07   29.8   0.3    3.5e-06   27.8   0.3    1.9  1  Abhydrolase_6  Alpha/beta hydrolase family
    0.00012   21.5   0.0    0.00043   19.6   0.0    1.8  2  Hydrolase_4    Serine aminopeptidase, S33
  ------ inclusion threshold ------
      0.034   14.4   0.3       0.11   12.8   0.3    1.8  1  ASPRs          Ancylostoma-associated secreted protein relate
        8.3    6.6   6.6        3.5    7.8   0.2    3.2  3  Xrn1_D3        Exoribonuclease 1 Domain-3


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.5   0.0   3.1e-10   1.1e-06      28     113 ..     368     449 ..     345     458 .. 0.83

  Alignments for each domain:
  == domain 1  score: 28.5 bits;  conditional E-value: 3.1e-10
                    T.TSEEEEEEETTSTTSSSTTTGB.CHHSHHHHHHHHHHHHHHCTTSSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESECSSCCHH CS
  Abhydrolase_1  28 d.gfdvillDlrGvgySspapacinddygtasvaddldrildalgddkltlvGhSmGGmialayaaeyperVkalvllgaidpaasl 113
                    + + ++i++D +Gvg S+p  +    + +  s  dd++ i++ l + k+ +++hS G   ala a++ p+++++ + l a  p++ +
     KHJ34866.1 368 SlKLRLITPDRPGVGDSEPYNDG---TTTPLSWPDDIYTICQFLRITKFSILAHSAGAIYALATALRMPQHIRGRIHLLA--PWIPP 449
                    34789*****************5...455569*****************************************8777766..44444 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.3   9.7e-10   3.5e-06       2      98 ..     347     459 ..     346     667 .. 0.73

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 9.7e-10
                    EEE--GC.....GC.HHHHHHHHCCTCEEEEE--TTSTS-......GGCS--HHHCHHHHHHHCCTT..TTSEEEEEETCHHHHHHHHHHCC.... CS
  Abhydrolase_6   2 lllHGagssassWl.vapLaallaagvhvlapDlpGhGrs......dpppldledladlaalldelaagggpvvlvGHSlGGalalaaapla.... 86 
                    +++ G g+++++ + +++La  l  +   ++pD+pG G+s      ++ pl++   +d+  + + l+    ++ +++HS G+++ala    a    
     KHJ34866.1 347 FCCVGMGLTRYVTAfYDELALSLKLRL--ITPDRPGVGDSepyndgTTTPLSW--PDDIYTICQFLR--ITKFSILAHSAGAIYALA---TAlrmp 433
                    556788887666644889999999999..9********665555556777888..567788888886..9999**************...555556 PP

                    ...EE..EEES-.............- CS
  Abhydrolase_6  87 .lvvg..vlldp..pp.........t 98 
                      ++g   ll+p  pp         +
     KHJ34866.1 434 qHIRGriHLLAPwiPPsqmsvvggrV 459
                    63344745555555334443322211 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0   1.2e-07   0.00043      34     153 ..     373     506 ..     352     527 .. 0.73
   2 ?   -1.8   0.0      0.43   1.6e+03     189     235 ..     618     662 ..     605     663 .. 0.80

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 1.2e-07
  Hydrolase_4  34 vyalDhrGhGrsegkrghvpsfddyvdDlaafvekvkeehpelplfllGhSmGGliallyllrypdkva.glilsaPalkikakl............. 117
                   ++ D  G G se+     +   ++ dD+ ++++ ++     +++ +l+hS G++ al+ +lr p++++ ++ l aP++ + ++              
   KHJ34866.1 373 LITPDRPGVGDSEPYNDGTTTPLSWPDDIYTICQFLR----ITKFSILAHSAGAIYALATALRMPQHIRgRIHLLAPWIPPSQMSvvggrvglppnss 466
                  56789999999999888899999999******99999....8899************************7777*****98886658888776555432 PP

  Hydrolase_4 118 .kappllklllkllgkllpklqv..........snnlkadslsrdpe 153
                   +       +++ + ++lp+  +          ++n++++s+s++++
   KHJ34866.1 467 iP-------TSQRILRVLPTTILkaanssfisaTSNSLTSSISKQRK 506
                  22.......22222222233222333344456666666666666655 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.43
  Hydrolase_4 189 kitlPllllhGeaDkvvdpeasrelyerlgskdktlklypglyHell 235
                  +it  + + hG++D+ v+ e+   + ++++  ++++++ +g  H+l+
   KHJ34866.1 618 DITRAVVIHHGSKDTRVPLENVLWMGKTMK--RCEVNVLEGEGHSLM 662
                  566778899999999999999988888888..588888888888876 PP

>> ASPRs  Ancylostoma-associated secreted protein related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.3   3.1e-05      0.11      27      99 ..     120     196 ..     105     198 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.1e-05
       ASPRs  27 kkdskllkYdCeLEklaglllkdpekakvykeslgffelkfe.....eekeaglkvkqfiekavksWkkelekmrkkt 99 
                 kk +  + Y+ +LEkl +++l++++k+k+ +++  +fe + +       +e + + +++++ka+ s k +le  +k+ 
  KHJ34866.1 120 KK-QRRIIYKSSLEKLRNKELERRKKTKDSNDDRPTFEPSSSavnktISSELKSTSNNLVNKAMGSSKFTLESCGKHD 196
                 32.678*********************999999998887775333332344444577889999888888888777665 PP

>> Xrn1_D3  Exoribonuclease 1 Domain-3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.2   0.00098       3.5       6      53 ..     164     211 ..     160     216 .. 0.90
   2 ?   -1.2   0.0       0.6   2.2e+03      32      46 ..     302     316 ..     294     323 .. 0.74
   3 ?   -0.1   0.4      0.29     1e+03      11      31 ..     481     499 ..     476     505 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00098
     Xrn1_D3   6 keiaewLKkvkadlvkVslESdSltkfSiaaiEdyvenYivqevkles 53 
                 k i   LK +  +lv+ ++ S+ +t  S +  + y+e+ +++e +++s
  KHJ34866.1 164 KTISSELKSTSNNLVNKAMGSSKFTLESCGKHDSYIEKGSLNEATKDS 211
                 5677889*******************************9999988775 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.6
     Xrn1_D3  32 fSiaaiEdyvenYiv 46 
                  Si+ i++ ve Y  
  KHJ34866.1 302 SSIESIDEAVEAYLC 316
                 588888888888865 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.29
     Xrn1_D3  11 wLKkvkadlvkVslESdSltk 31 
                  LK + ++++  +  S+Slt 
  KHJ34866.1 481 ILKAANSSFISAT--SNSLTS 499
                 699******9665..888874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (711 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       770  (0.0429472); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.63u 0.26s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4810.58
//
Query:       KHJ34867.1  [L=675]
Description: putative camp-dependent protein kinase catalytic subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.5e-68  230.3   0.0    3.3e-68  229.9   0.0    1.2  1  Pkinase        Protein kinase domain
    2.4e-31  109.0   0.0    3.3e-31  108.5   0.0    1.1  1  Pkinase_Tyr    Protein tyrosine kinase
    4.5e-14   52.9   0.4    1.7e-13   51.0   0.4    2.1  1  Pkinase_C      Protein kinase C terminal domain
    2.3e-09   37.0   0.1    1.6e-08   34.2   0.0    2.0  2  Kinase-like    Kinase-like
    7.9e-07   29.3   0.1    4.6e-06   26.9   0.0    2.4  2  C2             C2 domain
    0.00045   19.9   0.3       0.15   11.7   0.1    2.4  2  FTA2           Kinetochore Sim4 complex subunit FTA2
    0.00084   18.4   0.2     0.0017   17.4   0.1    1.4  2  Haspin_kinase  Haspin like kinase domain
  ------ inclusion threshold ------
      0.014   15.4   0.0      0.025   14.5   0.0    1.4  1  APH            Phosphotransferase enzyme family
      0.019   14.9   0.0      0.036   14.0   0.0    1.4  1  Adeno_E3_15_3  Adenovirus 15.3kD protein in E3 region
       0.12   11.8   0.1       0.19   11.1   0.1    1.3  1  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  229.9   0.0   1.8e-71   3.3e-68       2     264 .]     305     565 ..     304     565 .. 0.92

  Alignments for each domain:
  == domain 1  score: 229.9 bits;  conditional E-value: 1.8e-71
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHS...CTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS-- CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklk...hpnivrlyevfeekdelylvleyveggeladllerkgsls 96 
                 + l+ +G+G+fG+Vy++++k+tg+i+A+K+++k+ + +kke  +++ E +il ++    +++iv l+ +f+++++lylv++y++ggel+ +l+r+g + 
  KHJ34867.1 305 QFLKLIGKGTFGQVYQVRKKDTGRIYAMKVLQKKVIVQKKEvAHTVGERNILVRTAmaeSQFIVGLKFSFQTPSDLYLVTDYMSGGELFWHLQREGRFC 403
                 67899*********************************999999*******988877789*************************************** PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEE.SSSSCSBCTTTSCGGGS-HHHH.TTSCBSHHHHHHHHHHHHHHHHHS CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlake.lessskltsfvgtseYlAPEvl.keneyskkvDvWslGvilyelltg 193
                 ee+ak+++++++ +l++lH++ i++rDlKpeNiL+d +g++ ++DFGl+k  l++++++++f+gt eYlAPEvl +e++y+k vD WslGv+++e+ +g
  KHJ34867.1 404 EERAKFYIAELILALQHLHKHDIVYRDLKPENILLDANGHIALCDFGLSKAnLTKNETTNTFCGTTEYLAPEVLlDETGYTKMVDFWSLGVLVFEMCCG 502
                 *************************************************962566666****************999********************** PP

                 S-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT....HHHHHTSGGG CS
     Pkinase 194 kppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt....aeellqhpyl 264
                   pf++e++++ +++++             k+ +p ++++  e ++++k ll+++pk+Rl+    aeel++hp++
  KHJ34867.1 503 WSPFYAEDTQQMYKNIAFG-----------KVRFP-RDTLTTEGRNFVKGLLNRNPKHRLGaiddAEELKRHPFF 565
                 *****77777755555555...........33333.567899*******************99999*******98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.5   0.0   1.8e-34   3.3e-31       2     249 ..     305     549 ..     304     554 .. 0.84

  Alignments for each domain:
  == domain 1  score: 108.5 bits;  conditional E-value: 1.8e-34
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS...-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTC CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl...khpnivkllgvctkeepllivteyvkgGdLlkfLrkke 96 
                  ++ k +G+G+fG+V++ + k++ +   +kV  K++    +++e ++ + e +i+ ++   + + iv l       + l++vt+y++gG+L  +L+++ 
   KHJ34867.1 305 QFLKLIGKGTFGQVYQVRKKDTGRIYAMKVLQKKV--IVQKKEVAHTVGERNILVRTamaESQFIVGLKFSFQTPSDLYLVTDYMSGGELFWHLQRE- 399
                  67899***********9999555555555555555..3455556677778888765533677788888888889999*******************8. PP

                  TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHHHH CS
  Pkinase_Tyr  97 kekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk.ftsksDvWsfGv 193
                    +++ ++   +++++  ++++L+++++v rdl   N+Ll+ n ++ ++DfGL+++  +++e  ++++     +++apE+l +++ +t+  D Ws Gv
   KHJ34867.1 400 -GRFCEERAKFYIAELILALQHLHKHDIVYRDLKPENILLDANGHIALCDFGLSKANLTKNE--TTNTFCGTTEYLAPEVLLDETgYTKMVDFWSLGV 494
                  .8888888888999999**************************************9844443..3455567899******988877************ PP

                  HHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS CS
  Pkinase_Tyr 194 llwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeR 249
                  l++E+++ g sp+   +++++++++  gk     ++ ++e  +++k  ++++p++R
   KHJ34867.1 495 LVFEMCC-GWSPFYAEDTQQMYKNIAFGKVRFPRDTLTTEGRNFVKGLLNRNPKHR 549
                  ******9.*****************8888777777889999999999999999988 PP

>> Pkinase_C  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   0.4   9.7e-17   1.7e-13       1      46 []     586     639 ..     586     639 .. 0.97

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 9.7e-17
   Pkinase_C   1 vesdeDtsNFDpeFTeedprdtppddm........pagspltssvqenFrGFtY 46 
                 ++s++DtsNFDpeFT++   d p++d           ++pl++ +q nF+GFt+
  KHJ34867.1 586 LDSETDTSNFDPEFTNALNGDGPLNDRaaalaagiATSTPLSPGMQANFKGFTF 639
                 58****************999999999**************************9 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0       0.2   3.5e+02      18      53 ..     308     343 ..     300     385 .. 0.76
   2 !   34.2   0.0   8.8e-12   1.6e-08     142     288 .]     404     549 ..     390     549 .. 0.72

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.2
  Kinase-like  18 ellkkgdrsvvfevkdqetgeplavkvfllpseask 53 
                  +l++kg ++ v++v+ + tg   a+kv   +    k
   KHJ34867.1 308 KLIGKGTFGQVYQVRKKDTGRIYAMKVLQKKVIVQK 343
                  6899****************9999999776654444 PP

  == domain 2  score: 34.2 bits;  conditional E-value: 8.8e-12
  Kinase-like 142 etiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvl.seve..kgfaPpEllgsrggytrknktkmthkldaWql 236
                  e+ a+ ++ ++li   ++L+++ +v  +++++n+lld +g + l +f+      tk    ++ +    +  pE+l          +t +t  +d W l
   KHJ34867.1 404 EERAKFYI-AELILALQHLHKHDIVYRDLKPENILLDANGHIALCDFGLSKANLTKNETtNTFCgtTEYLAPEVLLD--------ETGYTKMVDFWSL 492
                  56678888.8899999*******************************844333344433233333333444555555........5678889****** PP

  Kinase-like 237 GlviyriwclklPl.tlateeakeewkfklckkipekv....kaLlkkfLqlsqedR 288
                  G+ ++ + c   P+  ++t+++ ++  f +++   + +    +  +k++L+++ ++R
   KHJ34867.1 493 GVLVFEMCCGWSPFyAEDTQQMYKNIAFGKVRFPRDTLttegRNFVKGLLNRNPKHR 549
                  *************94578888888889999984444441222567888888776665 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.0   2.6e-09   4.6e-06      22     101 ..     183     269 ..     120     271 .. 0.62
   2 ?   -3.5   0.0       7.5   1.3e+04      20      34 ..     281     295 ..     272     298 .. 0.62

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 2.6e-09
                 CEEEEEEEEECEEEEEE-S.........CSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHH.HHTTHHHHEEE CS
          C2  22 sdpyvkvsldgkqkakTrv.........iknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplst.llsgeeaegwy 101
                 s+p v     + q   T++         +kn++nP W+ k  f+v   ++ +++++++d+     d+f+G++e++ +    ++ + +gw+
  KHJ34867.1 183 SKPMVIPMK-SRQSSNTSTidhpdvtfrKKNTINPHWETKAIFDVVG-SDPSIHLTIYDRGL-AADEFLGHTEFQANLtDIDSPPFKGWL 269
                 555554443.6677777766667766657999***************.***********999.**********99766445555566665 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 7.5
                 SSCEEEEEEEEECEE CS
          C2  20 gssdpyvkvsldgkq 34 
                 +  + yv+v+++ ++
  KHJ34867.1 281 NMGEIYVEVKFQPTR 295
                 455779999994333 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.1   8.4e-05      0.15      18      56 ..     298     338 ..     290     366 .. 0.79
   2 !    5.8   0.0    0.0051       9.1     178     212 ..     411     450 ..     403     452 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 8.4e-05
        FTA2  18 fsaekdiefleyLgkglhsiVlkvkirgk..eYALKlFrfl 56 
                 + +++d++fl+++gkg+ ++V++v+ ++   +YA+K+  + 
  KHJ34867.1 298 HYGPEDFQFLKLIGKGTFGQVYQVRKKDTgrIYAMKVLQKK 338
                 456689******************9886445*****97654 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0051
        FTA2 178 lpkllrdlkklhklgIvvrDlkeenyi...dg..kLvDls 212
                 + +l+  l+ lhk+ Iv rDlk+en++   +g   L+D++
  KHJ34867.1 411 IAELILALQHLHKHDIVYRDLKPENILldaNGhiALCDFG 450
                 6778889******************974333322356665 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       1.8   3.2e+03     109     128 ..     311     330 ..     294     386 .. 0.75
   2 !   17.4   0.1   9.3e-07    0.0017     228     262 ..     426     460 ..     404     468 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.8
  Haspin_kinase 109 seklssevyqtkekdkevvl 128
                    +++ +++vyq+++kd+  ++
     KHJ34867.1 311 GKGTFGQVYQVRKKDTGRIY 330
                    67788888888887665443 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 9.3e-07
  Haspin_kinase 228 FEHRdLhldniLvdknlnvtlidlklsRle.ssegk 262
                       RdL+ +niL+d+n+++ l+d+ ls+++ + +++
     KHJ34867.1 426 IVYRDLKPENILLDANGHIALCDFGLSKANlT-KNE 460
                    557**************************953.333 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   1.4e-05     0.025     151     197 ..     409     453 ..     344     456 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 1.4e-05
                 HHHHHHHHH--SSS-EEEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 151 qvlaalaallpgelptvllHgDlhpgNllvdpddgrvtGviDfedag 197
                   +a+l   l+   ++ ++ +Dl+p N+l+d ++g++ ++ Df++++
  KHJ34867.1 409 FYIAELILALQHLHKHDIVYRDLKPENILLD-ANGHI-ALCDFGLSK 453
                 34444444444467899**************.88998.*****9875 PP

>> Adeno_E3_15_3  Adenovirus 15.3kD protein in E3 region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.0     2e-05     0.036      27     111 ..     302     389 ..     291     392 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2e-05
  Adeno_E3_15_3  27 edmvnlhqckrgifcvvkqakl.tyektttgnrlsyklptqrqklvlmvgekpitvtqhsaetegc..lhfpyqgpedlctliktmcg 111
                    ed+  l+   +g f  v q +     +  + + l  k+  q++++   vge+ i v    ae++    l+f +q p dl  +   m g
     KHJ34867.1 302 EDFQFLKLIGKGTFGQVYQVRKkDTGRIYAMKVLQKKVIVQKKEVAHTVGERNILVRTAMAESQFIvgLKFSFQTPSDLYLVTDYMSG 389
                    6666777777888888887654145566677889999************************998642389*********988888776 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   0.00011      0.19     117     175 ..     404     458 ..     381     464 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00011
         Kdo 117 eelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldkarlrlra 175
                 ee+ +  + ++  + + lh+ ++  +dl + nill++++    +i+l D+  ++  l++
  KHJ34867.1 404 EERAKFYIAELILALQHLHKHDIVYRDLKPENILLDANG----HIALCDFGLSKANLTK 458
                 55555566666677899**********************....******9877776654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (675 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       459  (0.025601); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 4735.98
//
Query:       KHJ34868.1  [L=631]
Description: putative c2h2 and c2hc zinc finger [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.18   11.6   4.1       0.28   11.0   1.4    2.1  2  RLL       RNA transcription, translation and transport factor


Domain annotation for each model (and alignments):
>> RLL  RNA transcription, translation and transport factor protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.4   1.6e-05      0.28      81     205 ..     203     318 ..     183     331 .. 0.66
   2 ?    0.5   0.1     0.024   4.4e+02     118     182 ..     425     490 ..     405     539 .. 0.56

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 1.6e-05
         RLL  81 vldwLlslAvkleYkDna..dkieelkkklkqksklekkkseqeeqkksaepldaldvtskelkealnklakllniplhpddlvlleaalklieeklse 177
                 +++wL+s A +l Yk +   ++ e +        k+++++ ++ +q+k++e  ++  v+ ++ k  ++++ + l  ++++d++ +++ a  li++ l++
  KHJ34868.1 203 LINWLAS-ADRLGYKPDDilEDDELVIP------KQTSQNLHDANQDKKTEGSNS--VAHNQTKSSVEQVRNTLSGSIQVDPANTCQQAHNLIHTGLKR 292
                 5566665.66666665222222222222......222334445556666666666..8889*************************************9 PP

         RLL 178 eaiekakkekktkgeplklee.fplGfdl 205
                 ++i k  + +   +  +k e  ++ G ++
  KHJ34868.1 293 KEIDKPMQIPSDHQ--NK-EPlMKNGPNT 318
                 98866555444333..22.2224444444 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.024
         RLL 118 kseqeeqkksaepldaldvtskelkealnkla.kllniplh....pddlvlleaalklieeklseeaiek 182
                 +s q eq ++  pl++    s++l +   +l+ + + i+++    p + +++++ ++ i e+l++e ++ 
  KHJ34868.1 425 SSPQLEQSTQMIPLNS----SSQLAQDSSSLIsQNVSISPNlmtpPGSIISFQSEMRSIDENLKKEVANI 490
                 2333333445555555....55566655555514456666678867778999999999999999555422 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (631 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.37
# Mc/sec: 5147.15
//
Query:       KHJ34869.1  [L=545]
Description: hypothetical protein EV44_g5007 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0012   18.6   1.1      0.003   17.4   0.6    2.0  1  F-box-like  F-box-like


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.4   0.6   1.7e-07     0.003       2      45 ..       2      49 ..       1      52 [. 0.83

  Alignments for each domain:
  == domain 1  score: 17.4 bits;  conditional E-value: 1.7e-07
  F-box-like  2 srLPdEiLlqIF.......syLppsdLlrlalVCrrWrrvaldtplLWrrl 45
                ++LP+E+L qI+       +y + + +++l+lVC  + ++    p++ +++
  KHJ34869.1  2 DSLPTELLWQILawevqicRY-EKNAIVPLRLVCHAFDSAL--KPYIFKTV 49
                79**********666655555.8889************998..66998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (545 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       339  (0.0189079); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.37
# Mc/sec: 4462.12
//
Query:       KHJ34870.1  [L=709]
Description: putative duf1604 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.5e-40  134.5   1.8    4.6e-39  132.1   0.6    2.8  3  DUF1604    Protein of unknown function (DUF1604)
      3e-08   33.4   1.5    7.9e-08   32.1   0.4    2.3  2  G-patch    G-patch domain
  ------ inclusion threshold ------
      0.015   15.4   0.8      0.015   15.4   0.8    3.1  3  G-patch_2  G-patch domain


Domain annotation for each model (and alignments):
>> DUF1604  Protein of unknown function (DUF1604)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.1   0.6   7.7e-43   4.6e-39       1      83 [.      41     126 ..      41     128 .. 0.95
   2 ?   -3.3   0.0       1.4   8.4e+03      42      52 ..     362     372 ..     361     385 .. 0.73
   3 ?   -0.7   0.0      0.22   1.3e+03      39      56 ..     437     454 ..     435     467 .. 0.81

  Alignments for each domain:
  == domain 1  score: 132.1 bits;  conditional E-value: 7.7e-43
     DUF1604   1 avpvwkqevtdekgrrrlhGAftGGfsaGyfntVGskeGwtPstfkSsrkerakk...akkqrvedfmDeedleeleeskkletke 83 
                 +vp+wkqev+de+g +rlhGAftGGfsaGyfntVGskeGw Pstf+Ssr++r+++    k++r+edfmDeed++++e+++++et +
  KHJ34870.1  41 YVPIWKQEVRDERGLKRLHGAFTGGFSAGYFNTVGSKEGWSPSTFTSSRSNRNNEalkIKQKRPEDFMDEEDIRDAEDARRVETMA 126
                 689**************************************************998878899*******************99876 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.4
     DUF1604  42 PstfkSsrker 52 
                 P+ +kSsr++ 
  KHJ34870.1 362 PEGWKSSRQTD 372
                 78899999875 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.22
     DUF1604  39 GwtPstfkSsrkerakka 56 
                 G  P++f+ s +er+k+ 
  KHJ34870.1 437 GQVPKEFNMSEEERKKEL 454
                 6789********999984 PP

>> G-patch  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.4   1.3e-11   7.9e-08       2      22 ..     153     177 ..     152     193 .. 0.75
   2 ?   -1.9   0.0      0.55   3.3e+03      34      45 .]     208     219 ..     201     219 .. 0.65

  Alignments for each domain:
  == domain 1  score: 32.1 bits;  conditional E-value: 1.3e-11
     G-patch   2 sniGvkmLqkmGWkpGqGLG....k 22 
                 + iG+k+LqkmGW++GqG+G    +
  KHJ34870.1 153 ETIGSKLLQKMGWREGQGIGpkvrR 177
                 679*****************55550 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.55
     G-patch  34 kikkdraGlGak 45 
                  +k d +GlG+k
  KHJ34870.1 208 IKKNDLKGLGYK 219
                 445555999986 PP

>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.3      0.29   1.7e+03      42      51 ..      96     105 ..      79     137 .. 0.51
   2 ?   15.4   0.8   2.5e-06     0.015      15      58 ..     153     219 ..     153     222 .. 0.71
   3 ?   -0.1   0.1      0.17     1e+03      22      37 ..     213     228 ..     210     237 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.29
   G-patch_2  42 kpeepkrRpg 51 
                 + +  ++Rp+
  KHJ34870.1  96 ALKIKQKRPE 105
                 3444455544 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 2.5e-06
   G-patch_2  15 eeFGaAlLrGMGWkegqgigknkkgr.......................vkpeepkrRpgrlGLGak 58 
                 e  G+ lL  MGW egqgig +   +                       ++ +   ++ ++ GLG k
  KHJ34870.1 153 ETIGSKLLQKMGWREGQGIGPKVRRTarleddskseqgssstyyfapenTEVVRLIKKNDLKGLGYK 219
                 568999**************99766666666666666666666666666666666666666666665 PP

  == domain 3  score: -0.1 bits;  conditional E-value: 0.17
   G-patch_2  22 LrGMGWkegqgigknk 37 
                 L+G+G+k + + g+++
  KHJ34870.1 213 LKGLGYKGEVKLGQKN 228
                 89*****888888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (709 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 5128.93
//
Query:       KHJ34871.1  [L=126]
Description: putative atp synthase h mitochondrial precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      1e-21   76.7   0.5    1.3e-21   76.3   0.5    1.2  1  ATP_sub_h  ATP synthase complex subunit h


Domain annotation for each model (and alignments):
>> ATP_sub_h  ATP synthase complex subunit h
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.3   0.5   7.3e-26   1.3e-21       4      69 .]      31      96 ..      28      96 .. 0.94

  Alignments for each domain:
  == domain 1  score: 76.3 bits;  conditional E-value: 7.3e-26
   ATP_sub_h  4 st.tavrrkDlvqdLYlkeLkaykpkplkaadaegaVkkwsaPaaPkaPeleadlaseLkaYeaqev 69
                +  tavr++Dlvqd+Y++eL+ayk++++k++d+eg+V+k+s+P ++ +Pe ea+l +eLkaYea++v
  KHJ34871.1 31 AIpTAVRKADLVQDMYIRELRAYKVPSVKPSDSEGQVQKFSPPLPAISPE-EANLMNELKAYEASSV 96
                4559**********************************************.************9976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1013.29
//
Query:       KHJ34872.1  [L=533]
Description: putative cysteine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.4e-29  101.3   0.0    1.4e-28  100.2   0.0    1.4  1  PALP       Pyridoxal-phosphate dependent enzyme
    4.6e-05   23.9   0.0    0.00018   22.0   0.0    2.0  1  Rhodanese  Rhodanese-like domain


Domain annotation for each model (and alignments):
>> PALP  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.2   0.0   1.5e-32   1.4e-28       9     281 ..      36     301 ..      31     308 .. 0.88

  Alignments for each domain:
  == domain 1  score: 100.2 bits;  conditional E-value: 1.5e-32
                 -EEEECCTC...CCCCCEEEEEEGGGSTTSBTTHHHHHHHHHHHHTTTTTSEEEEEBSSHHHHHHHHHHHHH.T-.EEEEEEETTS-HHHHHHHHHTT- CS
        PALP   9 Plvrlprls...kelgvplflKlEslnptgSfKdRgaeyllarlkegtgaktvveassGNhgralAaaaall.Gl.kvtivvpadaspekvallrllGa 102
                 Plv++pr      + gv++++Kl  + p   +K + a ++l++ +   ++k +ve ssG + +a+++ a++l G+   + +++++a  +kv+llr +G 
  KHJ34872.1  36 PLVEIPRKLnpfYDDGVRIYAKLMTTLPAKNVKSLPALNMLSSPDISSQTKKIVEYSSGSTIMAISILARVLhGIeNTHAFLSNKADISKVELLRFFGL 134
                 777777766555566888*************************5555589**********************9**99********************** PP

                 EEEEE.......CCHHHHHHHHHHHHHHHSTTCEE--TTTSHHHHHH.HHTHHHHHHHHTTTTEEEEEEE-SSSHHHHHHHHHHHHHSTT-EEEEEEEC CS
        PALP 103 evvev.......ggdydeavaaaaelaaegegaylvsqfdnptvieg.ygtiglEileqlggkpdavvvpvGgGgliaGiaaglkerrpdvrvigvepe 193
                 +v ++       ++d      +a++l +e++++y+ +q++n  ++++ y+++g+++l+q+ + ++ + +++G+ g+++G++ +lk++rp+v  +gv++ 
  KHJ34872.1 135 NVSLFsgpsqpePEDSRGGIYYAEKLGEEDKSVYNPNQYKNDRNWQAhYKWTGPQLLKQM-PYLNIFCAGMGTSGTMTGVGLYLKDHRPEVFRVGVNNP 232
                 *****9988776666777777799************************************.6**********************************999 PP

                 TTCGGTTCCS..S.SS..B.SSS.CCSTCSCGTTCCHHHHSEEEEEEEEEEHHHHHHHHHHHHHHHSB-B-HHHHHHHHHH.HHHHHHC CS
        PALP 194 gsdalarslragrrvtvpvsdtiadglavgspselafelldrlvdeivtvsdeealeamrllarregivvepssaaalaal.klreage 281
                 + d++ +++                +    +p  + +   ++ vd+i + s+ + ++    l  reg++++pss+ +l++l  l+++++
  KHJ34872.1 233 RGDKVPGTR----------------SAVLMEPIKFPW---REAVDTIEEGSSYDSFRLSLALS-REGLICGPSSGLNLQGLfALLNRRK 301
                 999999999................223335566667...6668888899999**********.*****************84444443 PP

>> Rhodanese  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0     2e-08   0.00018      14     104 ..     401     503 ..     385     506 .. 0.72

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 2e-08
   Rhodanese  14 vallDvRppeeYekghIpgAvnv...........skdtlsrakkseapllelpeellel.............gidnkktvvvycdgggraaaaaallkk 88 
                 +++lD R+  ++e +h+pgA++            +                  e + ++                ++ktv ++c +g+ ++ a+ +l++
  KHJ34872.1 401 TQILDLRAVTDFEVWHLPGAISKpvnglatetpsP-----------FLNISVMEHIWPKllsilssystepeSSIEHKTVALICYDGDTSRVATSILRA 488
                 34*********************666655555442...........222223333333333334444444665557999**********888899***9 PP

   Rhodanese  89 lGyknvsvldGGfkaw 104
                  G  +   l GG+++ 
  KHJ34872.1 489 RG-IEAVSLMGGMNGL 503
                 **.7888888999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.22s 00:00:00.74 Elapsed: 00:00:00.37
# Mc/sec: 4290.92
//
Query:       KHJ34873.1  [L=96]
Description: hypothetical protein EV44_g3538 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
  ------ inclusion threshold ------
       0.07   13.1   0.0      0.073   13.1   0.0    1.1  1  Lipoprot_C  Lipoprotein GNA1870 C terminal like


Domain annotation for each model (and alignments):
>> Lipoprot_C  Lipoprotein GNA1870 C terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   4.1e-06     0.073      83     115 ..      49      81 ..      16      94 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 4.1e-06
                 --SSGGGS-EEEEEEEEE-TTSBEEEEEEEEET CS
  Lipoprot_C  83 hlkspelnvelaaaelkadekrhavilgdvlyn 115
                 +lksp  nv la a +kad k    +  ++ y 
  KHJ34873.1  49 KLKSPFENVMLAVASVKADLKAEFELFKSIPYR 81 
                 69*****************99987777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       529  (0.0295053); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.20s 00:00:00.56 Elapsed: 00:00:00.35
# Mc/sec: 824.00
//
Query:       KHJ34874.1  [L=187]
Description: hypothetical protein EV44_g3257 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       351  (0.0195772); expected 358.6 (0.02)
Passed bias filter:                      295  (0.0164538); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.18s 00:00:00.54 Elapsed: 00:00:00.32
# Mc/sec: 1767.35
//
Query:       KHJ34875.1  [L=202]
Description: hypothetical protein EV44_g3309 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       624  (0.0348039); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.22s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1728.99
//
Query:       KHJ34876.1  [L=188]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.29   11.5   7.4       0.78   10.1   0.5    2.4  2  eIF3g     Eukaryotic translation initiation factor 3 subunit 


Domain annotation for each model (and alignments):
>> eIF3g  Eukaryotic translation initiation factor 3 subunit G
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.5   4.3e-05      0.78     100     120 ..      51      71 ..      41      75 .. 0.78
   2 ?    4.5   1.3    0.0024        42     104     114 ..      92     102 ..      80     112 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 4.3e-05
       eIF3g 100 kekklvkCriCkgdHfTskCP 120
                 k++    C+ C+g+H T +C 
  KHJ34876.1  51 KQQPSEFCKRCNGHHLTKNCS 71 
                 3445578*************5 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0024
       eIF3g 104 lvkCriCkgdH 114
                 + kCr+C+g H
  KHJ34876.1  92 TTKCRNCGGPH 102
                 479******** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       753  (0.041999); expected 358.6 (0.02)
Passed bias filter:                      391  (0.0218082); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1516.52
//
Query:       KHJ34877.1  [L=168]
Description: hypothetical protein EV44_g3997 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       451  (0.0251548); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1265.53
//
Query:       KHJ34878.1  [L=160]
Description: hypothetical protein EV44_g4346 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.66   10.7   3.6       0.67   10.7   0.1    2.1  2  MRNIP     MRN-interacting protein


Domain annotation for each model (and alignments):
>> MRNIP  MRN-interacting protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.5     0.041   7.3e+02      73     100 ..      27      54 ..       3      69 .. 0.49
   2 ?   10.7   0.1   3.8e-05      0.67      40      85 ..     109     154 ..      99     160 .] 0.67

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.041
       MRNIP  73 eeekeeseeeeklkedkenkseeikskk 100
                 ++++++++ + ++++  +++s+++++k+
  KHJ34878.1  27 RKHQRSEQGRIEVQDLPNSESSSRTRKQ 54 
                 3333333333333333333333322222 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 3.8e-05
       MRNIP  40 sgkdcrqlVqklnlkkgekeeeedeelkekkqeeeekeeseeeekl 85 
                 ++k++r++ q+ln++kg +  ++++++ + + ++ + e + +++++
  KHJ34878.1 109 AAKELRKMSQRLNIRKGPRPGNKAKKKAKISADSASVEVDRKNTES 154
                 79***************99997774444444444444444444333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       767  (0.0427799); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.35
# Mc/sec: 1378.40
//
Query:       KHJ34879.1  [L=734]
Description: putative microtubule associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-77  262.1  42.6    2.4e-72  244.5  23.6    2.2  2  MAP65_ASE1    Microtubule associated protein (MAP65/ASE1 fami
  ------ inclusion threshold ------
       0.24   12.0   2.7        2.1    9.0   0.2    3.1  2  UPF0113_N     UPF0113 Pre-PUA domain


Domain annotation for each model (and alignments):
>> MAP65_ASE1  Microtubule associated protein (MAP65/ASE1 family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2  11.0   5.4e-12   4.8e-08      32     242 ..       7     219 ..       4     227 .. 0.81
   2 !  244.5  23.6   2.7e-76   2.4e-72      64     499 ..      96     546 ..      86     576 .. 0.83

  Alignments for each domain:
  == domain 1  score: 32.2 bits;  conditional E-value: 5.4e-12
                 HHHHHHHHHHHHHHHHHST-----....-SS--SHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS......---SS--TSS--HHHH CS
  MAP65_ASE1  32 lneIaelraeasglksiLheepvdvpqsekkelsLlq.kkkkldtaleelrkekaerlaeflelleqlqklceelge......eplsllidslpkleel 123
                  ++I+ +++ ++gl + ++  p +  + ek e+ Ll+   k+l++++ ++ +ek +  +e   ++++ +++  +l +       +++++  + p ++ l
  KHJ34879.1   7 SSQISNVIEQVNGLLEDIGL-PCQ--EREKRESELLSaLSKTLNNHVRQITAEKHRLVEEAHHIMKTIKQMEASLDDqkpfveHEDEKFLITYPLMKFL 102
                 56777888888888877777.566..4455555555516788999999999999999999999999999999999998877766666666677777779 PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----SHHHHHHHCT-TTTS-....TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  MAP65_ASE1 124 eslrkhleelkeekerRleeikelkkqIkslmeeLglepktsieedllkesednskklkpltretikkLkllkkeleeqksereeklkdlrekikeLWn 222
                 ++l ++  ++ +  ++R+ee+k+l ++++s+++ L+ ++         ++  +n + + +l+++ i +Lk++++++++ + +r +++k+l e+i  LW 
  KHJ34879.1 103 KELKQKHLQISKLHKERFEEVKKLVQSLISYSSFLEPSFVKITLP--PTSPSANIPPTFDLSQKYIISLKKEIDRVQKDYLQRIATVKSLSENIILLWA 199
                 999888889999999*********************999876666..3345556666888*************************************** PP

                 HS---HHHHHHHTTTSSSSS CS
  MAP65_ASE1 223 rLqvpqeeqeafvrenssls 242
                  L +pq ++++ + e   +s
  KHJ34879.1 200 ELGTPQVQTDRKIVEHYRIS 219
                 ******99998877666555 PP

  == domain 2  score: 244.5 bits;  conditional E-value: 2.7e-76
                 -SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS.......---SS--TSS--HHH...........HHHHHHHHHHHHHHHHHHHHHH CS
  MAP65_ASE1  64 lsLlqkkkkldtaleelrkekaerlaeflelleqlqklceelge.......eplsllidslpklee...........leslrkhleelkeekerRleei 144
                  +L + +k+l+++  ++ k  +er +e ++l++ l ++++ l         +p   +++      +           + sl k ++  ++ + +R++ +
  KHJ34879.1  96 YPLMKFLKELKQKHLQISKLHKERFEEVKKLVQSLISYSSFLEPsfvkitlPPT-SPSA------NipptfdlsqkyIISLKKEIDRVQKDYLQRIATV 187
                 68999999999999999***********************99996655553233.2222......23444446888899******************** PP

                 HHHHHHHHHHHHHHT----SHHHHHHHCT-TTTS-....TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---HHHHHHHTTTSSSSSH CS
  MAP65_ASE1 145 kelkkqIkslmeeLglepktsieedllkesednskklkpltretikkLkllkkeleeqksereeklkdlrekikeLWnrLqvpqeeqeafvrensslsq 243
                 k+l ++I+ l+ eLg++  ++ ++  + e    s++   l++  i +L+l  ++l e+k  re++l+dl ek++ LWn+L v  +++e f+++n +  +
  KHJ34879.1 188 KSLSENIILLWAELGTPQVQTDRK--IVEHYRISPEQLGLHEADIIQLRLKRDKLLEEKRRRENQLQDLNEKVEFLWNKLGVEYDYRENFLNSNRGCGI 284
                 *****************9999999..5567777777899************************************************************ PP

                 CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---HHHHHTC-TTSTSS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  MAP65_ASE1 244 etidaleeEleRLeeLKkknlkklIedlRqeIeelWdkllyseeerkafipvfeeledeelLelhElelkqLkeelesnKeilelvekfeslwedeeeL 342
                 + i+ +e El RL+eLK++nl  +Ied R +I+elWd+l +see+  +f+p f++++   lLe+hE+e+ +Lk+   ++ +il l ek +sl++d   L
  KHJ34879.1 285 RQINEFEYELARLSELKRQNLNVFIEDARYKIQELWDSLYFSEEQMLEFTPAFSDVYSDVLLEAHEQEILKLKALKDQYATILVLLEKHRSLIKDRDDL 383
                 *************************************************************************************************** PP

                 HHHHT-GGGGTSST........SH..HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTS--EETTEEHHHHHHHHHHHHH...HHHHHHHHHHHHHH CS
  MAP65_ASE1 343 EakskDpsRlnnRG........ghkiLLkEEKeRkriskhlPkveqeLtekveaweeefgrpFlvdGeklleiieeqweeleekyqererqksarklkk 433
                  a+s+D+sRl++RG            LL+EEK+Rkrisk+lPkv +eL +++e+we+e+gr Flv+Ge+ l+ + e++++l+     r++  +   + k
  KHJ34879.1 384 QASSQDASRLLGRGqkgekrdpTR--LLREEKMRKRISKELPKVTSELSKELEKWENEHGRAFLVYGERYLDSLLEDSKTLH---VPRSKTPAGSIPTK 477
                 ****************77777666..*****************************************************999...77777666665666 PP

                 HHHHHHHHHCXXXXXXXXXXXXXX....XXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXX CS
  MAP65_ASE1 434 asqteeeilkgskmrtpskrrvta....pkTPsklksmskvsssssslkktpsnskslsankn.talstan 499
                 +s +    l+g +  t   +  +a     +TP   k++       s++k++ps+ +++   +n ++ ++++
  KHJ34879.1 478 KSPKR-GPLTGPTINTNLPQACVAsrpgAQTPAA-KTNVRYNGALSTVKRSPSKIPARVPISNiKNDNSPQ 546
                 66665.3444444455555555555533499986.444455555555666666655544333322222222 PP

>> UPF0113_N  UPF0113 Pre-PUA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   0.2   0.00023       2.1       1      62 [.      51     110 ..      31     114 .. 0.80
   2 ?    1.5   0.1     0.051   4.6e+02      21      55 ..     303     335 ..     285     341 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00023
   UPF0113_N   1 RklseeetrivfekLtkyigdnvkelldrkdgtycfrlkkkrVyyvseellklaetikpenl 62 
                 R+++ e++r+v+e+    i++ +k++    d+++ f++++++ ++++  l+k+++++k+++l
  KHJ34879.1  51 RQITAEKHRLVEEA--HHIMKTIKQMEASLDDQKPFVEHEDEKFLITYPLMKFLKELKQKHL 110
                 55556666665554..235788888888778899**************************98 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.051
   UPF0113_N  21 dnvkelldrkdgtycfrlkkkrVyyvseellklae 55 
                 +n++ +++  d  y +++ ++ +y+ +e++l++  
  KHJ34879.1 303 QNLNVFIE--DARYKIQELWDSLYFSEEQMLEFTP 335
                 47777777..889*****************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (734 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1351  (0.0753528); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.27s 00:00:00.97 Elapsed: 00:00:00.41
# Mc/sec: 5330.97
//
Query:       KHJ34880.1  [L=355]
Description: putative guanine nucleotide-binding protein beta subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.3e-36  122.7  23.3    2.2e-07   31.4   0.1    7.2  7  WD40         WD domain, G-beta repeat
    1.5e-14   54.0   0.1    0.00035   20.8   0.1    4.7  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    0.00023   20.2   0.1        1.9    7.4   0.0    3.9  4  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
    0.00052   19.9   0.0       0.11   12.4   0.0    2.6  3  eIF2A        Eukaryotic translation initiation factor eIF2A
     0.0029   17.0   0.1       0.13   11.6   0.0    2.9  4  WD40_like    WD40-like domain
  ------ inclusion threshold ------
      0.063   13.5   1.1       0.13   12.5   0.5    1.9  2  WXG100       Proteins of 100 residues with WXG


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.1   5.9e-09   1.7e-05       3      38 .]      59      95 ..      57      95 .. 0.94
   2 !   13.2   0.1   4.4e-05      0.13      12      38 .]     111     137 ..      99     137 .. 0.86
   3 !   13.5   0.1   3.5e-05       0.1       5      38 .]     150     183 ..     147     183 .. 0.89
   4 !    9.4   0.1   0.00066         2       2      38 .]     188     226 ..     187     226 .. 0.81
   5 !   31.4   0.1   7.4e-11   2.2e-07       1      38 []     230     268 ..     230     268 .. 0.95
   6 !   18.1   0.0   1.2e-06    0.0037      12      38 .]     286     312 ..     275     312 .. 0.91
   7 !   24.0   0.8   1.7e-08     5e-05       1      37 [.     316     353 ..     316     353 .. 0.95

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 5.9e-09
                EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38
                + rtl+GH   ++++ +s d + l+s+s Dg++ iWd
  KHJ34880.1 59 TRRTLKGHlAKIYAMHWSTDRRHLVSASQDGKLIIWD 95
                6799****999*************************9 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 4.4e-05
                 SEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvriWd 38 
                 +v  +a+ p+g+++a+G+ D+ + i++
  KHJ34880.1 111 WVMTCAYAPSGNYVACGGLDNICSIYN 137
                 488889*******************97 PP

  == domain 3  score: 13.5 bits;  conditional E-value: 3.5e-05
                 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGHss.vtslafspdgawlasGsdDgtvriWd 38 
                 r+l+GHs+  ++++f  d + l+s++ D t+  Wd
  KHJ34880.1 150 RELSGHSGyLSCCRFINDRSILTSSG-DMTCLKWD 183
                 789***555*************9999.****9998 PP

  == domain 4  score: 9.4 bits;  conditional E-value: 0.00066
                 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 
                 +++++++ H ++v s++ +p ++  ++sG  D   ++Wd
  KHJ34880.1 188 TKVTEFSDHlGDVMSISINPTNQNtFVSGACDAFSKLWD 226
                 578899***********55555554899966*******9 PP

  == domain 5  score: 31.4 bits;  conditional E-value: 7.4e-11
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 g+ ++t+ GH s++++++f pdg+ +++GsdD t+r++d
  KHJ34880.1 230 GKSVQTFAGHeSDINAIQFFPDGHSFVTGSDDATCRLFD 268
                 57899*****999************************98 PP

  == domain 6  score: 18.1 bits;  conditional E-value: 1.2e-06
                 SEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  12 svtslafspdgawlasGsdDgtvriWd 38 
                 ++ts+a+s +g++l++G dD  +++Wd
  KHJ34880.1 286 GITSVATSVSGRLLFAGYDDFECKVWD 312
                 59************************9 PP

  == domain 7  score: 24.0 bits;  conditional E-value: 1.7e-08
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                 g+++++l GH + v++l +s dg  l++Gs+D  ++iW
  KHJ34880.1 316 GEKVGSLVGHdNRVSCLGVSNDGMSLCTGSWDSLLKIW 353
                 578999****888************************* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.1   1.2e-07   0.00035      37      83 ..      66     112 ..      51     118 .. 0.86
   2 ?    3.9   0.0     0.023        68      41      71 ..     112     142 ..     108     185 .. 0.67
   3 !   13.1   0.0   2.9e-05     0.087      31      76 ..     235     278 ..     220     285 .. 0.81
   4 !   11.3   0.0   0.00011      0.31      41      88 ..     287     333 ..     281     337 .. 0.89

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 1.2e-07
  ANAPC4_WD40  37 edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkseka 83 
                  +  ++ +++W+ d + L+ a +dg++ + da++++ vh+++  s+  
   KHJ34880.1  66 HLAKIYAMHWSTDRRHLVSASQDGKLIIWDAYTTNKVHAIPLRSSWV 112
                  557899**********************************9998754 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.023
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlldaesgk 71 
                  v   a+ p+g+  a +  d+ +++++ +s +
   KHJ34880.1 112 VMTCAYAPSGNYVACGGLDNICSIYNLNSNR 142
                  6677899*****************9988754 PP

  == domain 3  score: 13.1 bits;  conditional E-value: 2.9e-05
  ANAPC4_WD40  31 tleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76 
                  t+  ++++s ++++++ pdg+ ++ + +d ++rl+d+   + ++++
   KHJ34880.1 235 TF--AGHESDINAIQFFPDGHSFVTGSDDATCRLFDIRADRELNQY 278
                  33..68899****************************999888876 PP

  == domain 4  score: 11.3 bits;  conditional E-value: 0.00011
  ANAPC4_WD40  41 vrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                  ++s+a + +g+lL  +y+d e+++ d+  g+ v sl  +++ +v+clg
   KHJ34880.1 287 ITSVATSVSGRLLFAGYDDFECKVWDITRGEKVGSLVGHDN-RVSCLG 333
                  78899999***************************966665.7***97 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.8   0.0    0.0076        23     175     221 ..      54     101 ..      39     109 .. 0.78
   2 !    7.4   0.0   0.00063       1.9     187     267 ..     109     191 ..      98     194 .. 0.79
   3 ?    2.7   0.0     0.017        50     186     218 ..     239     271 ..     222     279 .. 0.83
   4 ?    1.3   0.0     0.045   1.4e+02     184     214 ..     323     353 ..     301     355 .] 0.82

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.0076
    Ge1_WD40 175 eeieegllkieeh.sliveaafspdGtalatasedGevkffqvylede 221
                 +++ ++   ++ h ++i    +s+d   l  as+dG++  +  y +++
  KHJ34880.1  54 NQMMKTRRTLKGHlAKIYAMHWSTDRRHLVSASQDGKLIIWDAYTTNK 101
                 455555556677745899999********************9999876 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.00063
    Ge1_WD40 187 hsliveaafspdGtalatasedGevkffqvyledeeeprCLheWkPhdGkslssllfldnhke...esdeqfWrfaitgadnns 267
                  s +++ a++p G  +a    d +   + ++ + +   r   e   h G  ls+  f+++      + d ++ ++ + +  + +
  KHJ34880.1 109 SSWVMTCAYAPSGNYVACGGLDNICSIYNLNSNRDGPTRVARELSGHSGY-LSCCRFINDRSIltsSGDMTCLKWDVETGTKVT 191
                 3579999******************************************7.566666665433221458899888887666555 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.017
    Ge1_WD40 186 ehsliveaafspdGtalatasedGevkffqvyl 218
                 ++s i    f pdG +  t s d + ++f +  
  KHJ34880.1 239 HESDINAIQFFPDGHSFVTGSDDATCRLFDIRA 271
                 447899999********************9965 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.045
    Ge1_WD40 184 ieehsliveaafspdGtalatasedGevkff 214
                 + ++  +++  +s dG +l t s d ++k +
  KHJ34880.1 323 VGHDNRVSCLGVSNDGMSLCTGSWDSLLKIW 353
                 456678999999**************99998 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.4   0.0   3.6e-05      0.11      61     132 ..      69     138 ..      53     197 .. 0.80
   2 ?    4.0   0.0     0.013        39      62     118 ..     200     258 ..     172     262 .. 0.74
   3 !    4.6   0.0     0.009        27      57      91 ..     238     270 ..     203     351 .. 0.57

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.6e-05
                 .EEEEEE-TTSS-EEEEESSSSCEEEEEEC.SCEEEEEEEEES..--EEEE-TTSSEEEEE-TTSSS-EEEEEET CS
       eIF2A  61 pihdvaWspkskefaviyGkmpakvslfdl.kvkviskleeqk..rNtiffspkgklvllaGfgnlaGeleiwdv 132
                 +i++++Ws+++++  ++   ++ k  ++d  + ++++ +  ++    t  + p+g++v+ +G+ n+    +i++ 
  KHJ34880.1  69 KIYAMHWSTDRRH--LVSASQDGKLIIWDAyTTNKVHAIPLRSswVMTCAYAPSGNYVACGGLDNI---CSIYNL 138
                 5999***999887..47889999999999955888888766551156889**************99...555555 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.013
                 EEEEEE-TTSS-EEEEESSSSCEEEEEECS.CEEEEEE..EEES--EEEE-TTSSEEEEE CS
       eIF2A  62 ihdvaWspkskefaviyGkmpakvslfdlk.vkviskl..eeqkrNtiffspkgklvlla 118
                 +  ++ +p++++ + + G  +a  +l+d + +k + ++  +e+  N+i f p g+ ++++
  KHJ34880.1 200 VMSISINPTNQN-TFVSGACDAFSKLWDIRaGKSVQTFagHESDINAIQFFPDGHSFVTG 258
                 555555555444.45789999999999997666666662246678999999999887765 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.009
                 ESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECS CS
       eIF2A  57 kkegpihdvaWspkskefaviyGkmpakvslfdlk 91 
                  +e +i +++  p+++ f  + G  +a+  lfd +
  KHJ34880.1 238 GHESDINAIQFFPDGHSF--VTGSDDATCRLFDIR 270
                 233445555555555555..355555555555555 PP

>> WD40_like  WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0         1   3.1e+03     122     152 ..      68     101 ..      28     109 .. 0.59
   2 !   11.6   0.0   4.3e-05      0.13       7      88 ..     116     203 ..     110     248 .. 0.62
   3 ?    2.6   0.0     0.024        71       2      34 ..     242     274 ..     241     280 .. 0.88
   4 ?   -2.5   0.0      0.82   2.5e+03       5      39 ..     289     323 ..     286     344 .. 0.77

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 1
   WD40_like 122 seIkeikiennk..iysLses.afivfdlfsqni 152
                 ++I  ++ + ++  + s s++ ++i++d+++ n+
  KHJ34880.1  68 AKIYAMHWSTDRrhLVSASQDgKLIIWDAYTTNK 101
                 4444444332220033333222455555555554 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 4.3e-05
   WD40_like   7 diskkgslilyGgkddkctvlklesle..svsive...sfedSvifvklldddlilvvtlDGtillslleneeeven.ekieedistv 88 
                  + + g++++ Gg d+ c +++l+s+      +     + +  +  +++++d  il  + D t l+ ++e + +v +  +   d+  +
  KHJ34880.1 116 AYAPSGNYVACGGLDNICSIYNLNSNRdgPTRVARelsGHSGYLSCCRFINDRSILTSSGDMTCLKWDVETGTKVTEfSDHLGDVMSI 203
                 56789*******************9862234444400045566788***************999999999998554314555554443 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.024
   WD40_like   2 eiYsidiskkgslilyGgkddkctvlklesles 34 
                 +i +i++ ++g+ ++ G++d +c++++++ + +
  KHJ34880.1 242 DINAIQFFPDGHSFVTGSDDATCRLFDIRADRE 274
                 678899999******************998765 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 0.82
   WD40_like   5 sidiskkgslilyGgkddkctvlkleslesvsive 39 
                 s+  s  g l+  G +d +c+v ++  +e+v ++ 
  KHJ34880.1 289 SVATSVSGRLLFAGYDDFECKVWDITRGEKVGSLV 323
                 77888899999999999999999999988887655 PP

>> WXG100  Proteins of 100 residues with WXG
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.5   4.2e-05      0.13       2      53 ..       3      52 ..       2      76 .. 0.71
   2 ?   -2.2   0.0       1.6   4.9e+03      42      62 ..     214     235 ..     204     245 .. 0.64

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.2e-05
                HCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC.GCGCTHHHCHHHHHHH CS
      WXG100  2 ikvdpeelrqaaarfqkqaeeledelqrlkaevdal.qsgWsGaaadafqaef 53
                i+v+p+++++ +++++++ae+l+d   r+k++ d+l  ++ sG a+++ +a  
  KHJ34880.1  3 IDVSPDQMQARIQQARREAENLKD---RIKRKKDELaDGTLSGIARSQQEALP 52
                778888888777777777666665...67778888878888888888777665 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.6
                 THHHCHHHHHHHH.HHHHHHHH CS
      WXG100  42 sGaaadafqaefe.ewkqaaqk 62 
                    a daf + ++ +  +++q+
  KHJ34880.1 214 VSGACDAFSKLWDiRAGKSVQT 235
                 5556677777777555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (355 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       805  (0.0448993); expected 358.6 (0.02)
Passed bias filter:                      660  (0.0368119); expected 358.6 (0.02)
Passed Vit filter:                        96  (0.00535445); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 2455.25
//
Query:       KHJ34881.1  [L=279]
Description: putative phosducin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-12   46.6   0.0      9e-11   41.2   0.0    2.3  2  Phosducin  Phosducin


Domain annotation for each model (and alignments):
>> Phosducin  Phosducin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.2   0.0     0.002        35      20      39 ..      76      95 ..      58     126 .. 0.70
   2 !   41.2   0.0     5e-15     9e-11      95     240 ..     127     279 .]     111     279 .] 0.81

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.002
                --SSHHHHHHHHHHHHH.HH CS
   Phosducin 20 avntgpkgvindwrkfkqle 39
                   tg kgvi d r + +  
  KHJ34881.1 76 GRTTGVKGVIADARSYEEAR 95
                4679**********998443 PP

  == domain 2  score: 41.2 bits;  conditional E-value: 5e-15
                 T----HHHHHHHHHHHHHHHHHHH-......---...---SEEE--SHHHHHHHHHSS-TT-EEEEEEE-TTSTTHHHHHHHHHHHHHH-TTSEEEEEE CS
   Phosducin  95 kdkddeeflrkyrkqrmdemrqkls......kgp...rfkfvlelesgeqfldtidkeqkitlivvhiyedgvkgtealnssliclaaeyptvkfckvk 184
                  d +de f++ +r+qr  e++q  +        p   r++   +++   ++ld i+k    t++vv +y+     t+a+  +l  + + +p ++f +v+
  KHJ34881.1 127 SDTEDESFIETWRQQRRLELQQMGHdvrnrrTSPsvrRYGRFDDVD-ALGYLDAIEKVTPDTIVVVLVYDPECAVTKAITDALTPIVSMHPAIHFVRVH 224
                 5899*****9999998766666544111222344333677666665.469************************************************9 PP

                 HHHH--TTSS-TTT-SEEEEEE.TTEEEEEETTGGGGS-TT.--.HHHHHHHHHTTT-S CS
   Phosducin 185 asvigasdrfsrdvlpallvyk.agellsnfvrvtdqlaed.ff.avdleaflqefgll 240
                  + i     f +  +pa+l yk  g+l++n+  v d +  d ff +  le  l+++g+l
  KHJ34881.1 225 YADI----EFDNAGVPAILAYKeQGKLFANLTYVIDHIPADaFFnTRTLENVLRKHGIL 279
                 8766....79999********9559************965536645689*****99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       434  (0.0242066); expected 358.6 (0.02)
Passed bias filter:                      369  (0.0205812); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2080.88
//
Query:       KHJ34882.1  [L=338]
Description: putative cop9 signalosome complex subunit 5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-32  110.2   0.2      1e-30  106.1   0.0    2.2  2  JAB       JAB1/Mov34/MPN/PAD-1 ubiquitin protease
    4.9e-20   72.2   0.1    1.1e-19   71.1   0.0    1.7  2  CSN5_C    Cop9 signalosome subunit 5 C-terminal domain
      6e-05   22.8   0.0    9.4e-05   22.2   0.0    1.3  1  Prok-JAB  Prokaryotic homologs of the JAB domain
  ------ inclusion threshold ------
      0.031   14.3   0.0      0.079   13.0   0.0    1.8  2  UPF0172   Uncharacterised protein family (UPF0172)


Domain annotation for each model (and alignments):
>> JAB  JAB1/Mov34/MPN/PAD-1 ubiquitin protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.1   0.0   2.2e-34     1e-30       2     115 ..      47     157 ..      46     160 .. 0.95
   2 ?    1.9   0.0     0.047   2.1e+02      25      39 ..     311     323 ..     296     328 .. 0.73

  Alignments for each domain:
  == domain 1  score: 106.1 bits;  conditional E-value: 2.2e-34
                 SSCEEEEEHHHHHHHHHHHHHHHHHTS--EEEEEEEESSSEEEEEEEEEEESEEEESSECEEEEEHHHHHHHHHHHHHHHCTT.SEEEEEEEESSSS-S CS
         JAB   2 svqavhleslvllkildhalrtekeeeevmGlliGelnddttveitnvfalpfeetekdvdavsldqeylekksellkklrgr.ervvGWYhshpditv 99 
                  +++v++++ +llk++ ha+++++   e+mGl++G++++d t+ +t+ f lp+e+te++v+a+++ +ey+ ++ + + ++ g+ e+ vGWYhshp++++
  KHJ34882.1  47 YFKNVRISAVALLKMVMHARSGNSI--EIMGLMQGKIEGD-TFIVTDAFRLPVEGTETRVNAQDEANEYMVRYLQACREQ-GKlENAVGWYHSHPGYGC 141
                 5799*********************..*************.999***********************************8.888*************** PP

                 S--HHHHHHHHHHHHH CS
         JAB 100 wlsevdvrtqalyqrm 115
                 wls +dv+tq   q +
  KHJ34882.1 142 WLSGIDVSTQHIQQSF 157
                 **********988876 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.047
                 HHTS--EEEEEEEES CS
         JAB  25 keeeevmGlliGeln 39 
                 +  e vmGl+ Ge++
  KHJ34882.1 311 S--EGVMGLMAGEVK 323
                 3..58*******987 PP

>> CSN5_C  Cop9 signalosome subunit 5 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0         4   1.8e+04      59      81 ..      57      79 ..      29      81 .. 0.64
   2 !   71.1   0.0   2.5e-23   1.1e-19       1      89 []     248     328 ..     248     328 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 4
      CSN5_C 59 qLakvvkdstkiaseaqhGLiaq 81
                +L k+v  ++  +s + +GL++ 
  KHJ34882.1 57 ALLKMVMHARSGNSIEIMGLMQG 79
                55566666666666667777765 PP

  == domain 2  score: 71.1 bits;  conditional E-value: 2.5e-23
      CSN5_C   1 SqspLltNrdYatkqisDLaeKlekaessvsrsrsaagtlseeaseaeekkkkkkedsqLakvvkdstkiaseaqhGLiaqelKdklFn 89 
                 SqspL+tNr+Y  kq+ DL+ K++  +ss+ r ++ +g+++  +        +k  d qL+k+vkd++k++se ++GL+a e+K +lF+
  KHJ34882.1 248 SQSPLFTNRAYNCKQMLDLSTKINVLSSSLPRANRIPGQMQLYN--------NKYIDLQLDKIVKDGSKLSSEGVMGLMAGEVKVNLFK 328
                 9******************************9998887777543........899*********************************5 PP

>> Prok-JAB  Prokaryotic homologs of the JAB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.0   2.1e-08   9.4e-05       2      90 ..      55     149 ..      54     174 .. 0.75

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 2.1e-08
    Prok-JAB   2 esvlsalvaharrahpeEtcGlllgkeseseevivvplvnewsn..rfeipdpedslarlkf......earerglevvgiwHSHpggsarPSetDrr 90 
                 + +l ++v har+ +  E  Gl+ gk+ e    iv++  + +++  + ++ +++d + + ++      + + + ++ vg +HSHpg +   S  D +
  KHJ34882.1  55 AVALLKMVMHARSGNSIEIMGLMQGKI-EGDTFIVTDAFRLPVEgtETRV-NAQDEANEYMVrylqacREQGKLENAVGWYHSHPGYGCWLSGIDVS 149
                 567899********************9.8888888888877777663333.333333333336678778888999**********977666666655 PP

>> UPF0172  Uncharacterised protein family (UPF0172)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.8e-05     0.079       2      45 ..      51      92 ..      50     199 .. 0.77
   2 ?   -2.9   0.0       1.4   6.1e+03      11      33 ..     301     323 ..     300     325 .. 0.83

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.8e-05
     UPF0172  2 vevssqAYvKlllHaaKyptqaVnGvLlgkkssskskvevtDav 45
                v++s+ A +K+++Ha    + +++G++ gk + ++  + vtDa 
  KHJ34882.1 51 VRISAVALLKMVMHARSGNSIEIMGLMQGKIEGDT--FIVTDAF 92
                7899***************************9999..99**984 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.4
     UPF0172  11 KlllHaaKyptqaVnGvLlgkks 33 
                 K++    K +++ V+G++ g+ +
  KHJ34882.1 301 KIVKDGSKLSSEGVMGLMAGEVK 323
                 677788899999*****999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2490.73
//
Query:       KHJ34883.1  [L=892]
Description: putative sin3 complex subunit protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.024   14.7   0.4      0.061   13.4   0.4    1.6  1  UPF0242        Uncharacterised protein family (UPF0242) N-ter
      0.045   14.4   1.1       0.13   12.9   0.4    2.2  2  SlyX           SlyX
      0.071   12.6   0.1       0.15   11.5   0.1    1.5  1  LRRFIP         LRRFIP family
       0.25   11.7   1.4       0.62   10.4   1.4    1.7  1  BLOC1_2        Biogenesis of lysosome-related organelles comp
       0.58   10.3   5.1       0.14   12.3   1.0    2.1  2  Tropomyosin_1  Tropomyosin like


Domain annotation for each model (and alignments):
>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.4   1.7e-05     0.061      82     182 ..     741     839 ..     708     843 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.7e-05
     UPF0242  82 eglktkeealeelqeeeee.LkeeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqellqeyqetieeqrsvlekrqdqieqLeskV 179
                 e+l+   + l  lq++ +   +++l    +  ++l +++ +Lq+   +  +++ ++k   +e L  +++ + e  ++ie++r+ le    +i+ LeskV
  KHJ34883.1 741 ENLRRLLQILLGLQNNDKPwVENKLLGLIKIDKELLQDQDNLQIVYGQLMHQYGMMKHRFQEVLGSEHTHILEDGKEIENLRAKLE---YEINGLESKV 836
                 55555555555555554431333444444555678899999******************************************998...58******** PP

     UPF0242 180 rDl 182
                  D 
  KHJ34883.1 837 FDV 839
                 996 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       3.7   1.3e+04      35      51 ..     788     804 ..     781     810 .. 0.78
   2 ?   12.9   0.4   3.7e-05      0.13       2      41 ..     826     865 ..     825     868 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 3.7
                 HHHHHHHHHHHT-XXXX CS
        SlyX  35 rlqrqlrllaerlkele 51 
                 +l +q  +++ r++e+ 
  KHJ34883.1 788 QLMHQYGMMKHRFQEVL 804
                 78899999999999875 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 3.7e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        SlyX   2 eerleeLEiklafqedtieeLndvvaeqqqqidrlqrqlr 41 
                 e  ++ LE+k+   +d + +L ++v+e +q+ d+l++ql+
  KHJ34883.1 826 EYEINGLESKVFDVDDGVIQLERQVVELEQRADELETQLN 865
                 567999********************************97 PP

>> LRRFIP  LRRFIP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   4.2e-05      0.15     108     165 ..     818     875 ..     816     881 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.2e-05
      LRRFIP 108 LDNeksallYevdlLkdkleeleeslaelqrelrekckelerlkrqlealkleldelk 165
                 ++N +++l Ye++ L  k+ ++++ +++l+r++ e  + +++l +ql++ + +   l+
  KHJ34883.1 818 IENLRAKLEYEINGLESKVFDVDDGVIQLERQVVELEQRADELETQLNKGSWKSWILR 875
                 68999****************************************9998776666655 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.4   0.00017      0.62      48      95 ..     816     864 ..     809     865 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00017
     BLOC1_2  48 kkleklnekye.elqpylqqidqiekqvteLeeavseLDeyskeLEakf 95 
                 k++e+l++k e e++ + +++ ++++ v +Le  v eL++   eLE ++
  KHJ34883.1 816 KEIENLRAKLEyEINGLESKVFDVDDGVIQLERQVVELEQRADELETQL 864
                 68899999988899999*****************************987 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.2       2.2     8e+03      25      41 ..     658     674 ..     654     682 .. 0.68
   2 ?   12.3   1.0   3.9e-05      0.14      20      71 ..     812     863 ..     801     869 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.2
  Tropomyosin_1  25 eleqenlekeqeiksLt 41 
                    eleq   e+eqe+ks +
     KHJ34883.1 658 ELEQPIFEREQELKSYK 674
                    57888888888888643 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 3.9e-05
  Tropomyosin_1  20 eekvKeleqenlekeqeiksLtkknqqleeevekleeklkeakekaeesekk 71 
                     e+ Ke e+ + + e ei+ L+ k+  +++ v +le ++ e ++ a+e e++
     KHJ34883.1 812 LEDGKEIENLRAKLEYEINGLESKVFDVDDGVIQLERQVVELEQRADELETQ 863
                    577899999999****************************999999997765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (892 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.70u 0.26s 00:00:00.96 Elapsed: 00:00:00.42
# Mc/sec: 6427.69
//
Query:       KHJ34884.1  [L=96]
Description: putative mitochondrial import inner membrane translocase subunit tim10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.9e-20   70.3   2.7    9.1e-20   70.1   2.7    1.1  1  zf-Tim10_DDP  Tim10/DDP family zinc finger
  ------ inclusion threshold ------
      0.036   14.1   1.2      0.067   13.2   1.2    1.4  1  Tom5          Mitochondrial import receptor subunit or transl


Domain annotation for each model (and alignments):
>> zf-Tim10_DDP  Tim10/DDP family zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.1   2.7     1e-23   9.1e-20       2      63 ..      15      77 ..      14      78 .. 0.95

  Alignments for each domain:
  == domain 1  score: 70.1 bits;  conditional E-value: 1e-23
  zf-Tim10_DDP  2 qleqeqqvanaqelvnkltekCfkkCigk.ypgssLdsseesCldnCvdryldvsnlvskrlq 63
                  + ++eq+++++++++nkl + C+kkC+++ y++++L+++e++C+d+C ++++dv+ +vs+ lq
    KHJ34884.1 15 IAAAEQEMDMVTDMFNKLQKICMKKCVPQlYREGELNKGESVCIDRCSAKFFDVQLKVSELLQ 77
                  5689***********************8878****************************9887 PP

>> Tom5  Mitochondrial import receptor subunit or translocase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   1.2   7.5e-06     0.067       1      20 [.       1      21 [.       1      22 [. 0.75

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 7.5e-06
        Tom5  1 MFg.ggPpqpSeeEikaaeae 20
                MFg g P++ S+e i+aae+e
  KHJ34884.1  1 MFGlGRPQPSSAEKIAAAEQE 21
                ***667777777777888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (96 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       772  (0.0430587); expected 358.6 (0.02)
Passed bias filter:                      562  (0.0313459); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 712.44
//
Query:       KHJ34885.1  [L=586]
Description: putative lysyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-68  229.8   0.0    5.5e-68  229.4   0.0    1.2  1  tRNA-synt_2      tRNA synthetases class II (D, K and N)
    4.7e-05   23.3   0.0      9e-05   22.4   0.0    1.5  1  tRNA_anti-codon  OB-fold nucleic acid binding domain
    8.9e-05   22.1   0.1      0.027   13.9   0.0    2.3  2  tRNA-synt_2d     tRNA synthetases class II core domain (F)


Domain annotation for each model (and alignments):
>> tRNA-synt_2  tRNA synthetases class II (D, K and N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  229.4   0.0   9.2e-72   5.5e-68       2     311 ..     216     560 ..     215     563 .. 0.89

  Alignments for each domain:
  == domain 1  score: 229.4 bits;  conditional E-value: 9.2e-72
                  CCHHHHTHHHHC.CSHHHHHHHHHHHHHHHHHHHHHHHTT-EE----SEESS--SSSS--EEEEETTT.TEEE-E-S-SHHHHHHHHHCTHSEEEEEE CS
                  xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2   2 eelrlknryldl.rtekvskvlrlrstvtkavrkyleengfieietPiLsksdteegarlFkvksrekekeffaLtqspqlylellivagidrvfqia 98 
                  + ++++nr++dl  ++++++++r+rs++++++r++l +++fie++tP+Ls++++++ ar+F++ks++ +++  aL+++p+l+l++li++g+drvf+i+
   KHJ34885.1 216 KSTKMQNRHVDLlLNRSLQQTIRIRSHILQYLRNFLLRDNFIEVQTPLLSDKASGAIARPFLTKSEVISERNLALRIAPELWLKRLIIGGFDRVFEIG 313
                  6789********9****************************************************999776667************************ PP

                  EEE--S--BTTB-S-CEEEEEEEEET-SCHHHHHHHHHHHHHHHHHHHHCSCCCCCHTTTTTS.EE-SSS-EEEEHHHHHHHHHTS-SS--HHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2  99 raFRaEdsrtdrhlaEFtqieaemsfieeedimqvleelikslvkevlessakdiefvirrns.kdlkkpfkrltykeaieklneigkdldkaderal 195
                  ++FR+E ++ ++++ EFt++e++ +f++ e++m+++e++++ ++k+  ++++k   ++  +   + lk+p+kr+++  +ie +     + + +d+ a 
   KHJ34885.1 314 PSFRNEGFDLTHNP-EFTTCEFYKAFTSLEELMEITENIFSGMAKTS-QNIRKSFLNDLPEIDsSFLKTPYKRIEFIPTIEAAI----GEKLPDLSAD 405
                  **************.********************************.6666666666655542677888***********954....4444555555 PP

                  HH..................................HS--SEEEEEEEBGGGSTTCBBBSTTS..TTBBSEEEEEETTEEEEEEEEB--SHHHHHHHH CS
                  xx..................................xxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 196 vk..................................keknepvfvtdfPaelkpFyarkeedd..kkltesyDllingvElvgGslRiedpeeleekl 257
                  +                                      ++p+f++++P+ + p++++  + +  + ++++ ++++n +El++ + ++++p e+++k+
   KHJ34885.1 406 TAeedvialfsrhnlsltespkllrlldklsslyiePLCTVPTFIMHHPECMAPLAKSFLDPKsnQIVSARAEFFVNCIELANMYEEENSPIEQRRKF 503
                  5555555566688888888888888999999999988899*********9999999875443334899****************************** PP

                  HHCCHH...SSSGGGGHHHHHHHHCT--SEEEEEEEHHHHHHHHCT-SSGGGCSSS- CS
                  xxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  tRNA-synt_2 258 kskgld...eeaeekfswylealeyGapphgGlglGldRlvmlllgsesIrdviaFP 311
                  + +      e+++  ++ yl a+e+G+pp+gG+g+G+dRlvmll+gs+ I dv+ F 
   KHJ34885.1 504 EVQARYrdaENNSCVDESYLSAMEWGLPPTGGWGCGVDRLVMLLTGSRRISDVLSFG 560
                  *999887777888889**************************************996 PP

>> tRNA_anti-codon  OB-fold nucleic acid binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4   0.0   1.5e-08     9e-05       3      73 ..     118     198 ..     116     201 .. 0.86

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 1.5e-08
                      EEEEEEEEEEEEETTEEEEEEEETTEEEEEEEET...........HHHHHHHTTS-TTSEEEEEEEEEECTTSSEEEEEEEE CS
  tRNA_anti-codon   3 vaGrvtsisdrsggkvifidlrDgtgriqvvlfr...........eeatklaenlkeGdvvrvtGrvkrrpggelelkveei 73 
                      v+G+++s +   g++++f+d++ +  ++qvv++            e+++ l+   ++Gd++ vtG + ++++gel++ ++++
       KHJ34885.1 118 VRGKLVSSR-IMGARLVFLDIQQDGRSLQVVINLgslkdlstvseESFQLLYHLAQRGDYISVTGCPHKTKRGELSILADSL 198
                      777777774.55689*****************************666666666666*********************99987 PP

>> tRNA-synt_2d  tRNA synthetases class II core domain (F)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.9   0.0   4.6e-06     0.027     103     160 ..     308     363 ..     306     368 .. 0.87
   2 !    5.6   0.0    0.0016       9.5     211     232 ..     533     554 ..     516     561 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 4.6e-06
                   EEEEEEEEEBSST-SSSB-SEEEEEEEEEEETT--HHHHHHHHHHHHHHHCTSTEEEE CS
  tRNA-synt_2d 103 kiisigrvfRrdavDathlaeFhqveglvvdenvsladlkgvleellkklfgaevkvr 160
                   +++ ig  fR++  D th +eF+ +e+       sl++l+ + e++++ +  ++ ++r
    KHJ34885.1 308 RVFEIGPSFRNEGFDLTHNPEFTTCEFYK--AFTSLEELMEITENIFSGMAKTSQNIR 363
                   7899**********************865..558899999999999999977776666 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0016
                   EEEEEEEHHHHHHHHHT-SSGH CS
  tRNA-synt_2d 211 gfafGlGveRlamlkygieDiR 232
                     ++G Gv+Rl ml +g   i 
    KHJ34885.1 533 TGGWGCGVDRLVMLLTGSRRIS 554
                   568***********99976554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (586 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.20s 00:00:00.76 Elapsed: 00:00:00.36
# Mc/sec: 4903.69
//
Query:       KHJ34886.1  [L=398]
Description: putative phd-finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-20   71.6   1.2    9.7e-20   71.1   1.2    1.3  1  ING         Inhibitor of growth proteins N-terminal histone-b
    7.2e-05   22.6   6.4    0.00014   21.7   6.4    1.5  1  PHD         PHD-finger
  ------ inclusion threshold ------
      0.013   15.7   0.1      0.031   14.5   0.1    1.5  1  zf-HC5HC2H  PHD-like zinc-binding domain
       0.11   12.1   0.3       0.18   11.5   0.3    1.2  1  DUF1741     Domain of unknown function (DUF1741)
        4.6    7.8  12.5          4    8.0   0.1    3.2  3  FAM104      Family 104


Domain annotation for each model (and alignments):
>> ING  Inhibitor of growth proteins N-terminal histone-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   1.2   2.7e-23   9.7e-20       1     100 [.      12     116 ..      12     117 .. 0.96

  Alignments for each domain:
  == domain 1  score: 71.1 bits;  conditional E-value: 2.7e-23
                 HHHHHHTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH.TS..S-HHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         ING   1 yLedyldsvenLPlelqrnltelreiDakvqellkei...dskiekfl.kngslqknekeeels.riqeelkeaqelldeKiqlaqqaldlvdkhlrrL 94 
                 +L+d+++ v nLP+e+  +++e+ ++D ++ e+l  i   ds +++++ kng + +n+ke+++s  i +++++aq l+ eKi+laq+ + +vdkh+r+L
  KHJ34886.1  12 VLDDWINRVTNLPNEIAFMYEEIEQKDRQIAECLSIIskhDSTLQNWVrKNGGHMPNPKESSISkIIIDKYDKAQALQSEKIALAQKCQLIVDKHTRNL 110
                 69********************************999999************************8889******************************* PP

                 HHCTXX CS
         ING  95 dqdlek 100
                 d +++ 
  KHJ34886.1 111 DIHIKA 116
                 *99986 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   6.4   3.9e-08   0.00014       1      51 [.     347     393 ..     347     394 .. 0.84

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 3.9e-08
                 SBTTTTSTTSTTSCEEEET..TTS.CEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   1 rCavCkkksdeeeelvqCd..gCk.rwfHqkClkppleseekpegewlCekCke 51 
                 +C  C++     +++v Cd  +C+ +wfH +C++++ e    p g w+C+ Ck 
  KHJ34886.1 347 YC-TCRS--VSYGDMVGCDnpNCEfEWFHWSCVGLKSE----PLGIWICPACKA 393
                 68.9999..679*******555*967**********88....4456******96 PP

>> zf-HC5HC2H  PHD-like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.1   8.5e-06     0.031      20      66 ..     329     376 ..     317     383 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 8.5e-06
  zf-HC5HC2H  20 emeeiedvekikkerkklkCylCkkkvGaciqCskkkCk.kafHvtCa 66 
                   ee+ d e+ + + +++ C++ + ++G +++C++++C+ + fH  C 
  KHJ34886.1 329 GDEEMIDPEEDDGADNRKYCTCRSVSYGDMVGCDNPNCEfEWFHWSCV 376
                 456666667777778888887666779***********7478*****6 PP

>> DUF1741  Domain of unknown function (DUF1741)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.3   4.9e-05      0.18     115     196 ..       3      85 ..       2     101 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 4.9e-05
     DUF1741 115 lvetgevltkfrdlyklalrasvtteseakesakkatnsidnlisvsthfkelleekkakk..kkkeltpeqvlevIkqgYetL 196
                 ++e+++  t+++d  + +++   ++ +   e+ ++++++i+  +s+++   + l+++ +k+  +  +++++ ++++I + Y++ 
  KHJ34886.1   3 IIEQNDAATVLDDWINRVTNLP-NEIAFMYEEIEQKDRQIAECLSIISKHDSTLQNWVRKNggHMPNPKESSISKIIIDKYDKA 85 
                 6777777788888877775554.5555567778889999******************999977788889999*********975 PP

>> FAM104  Family 104
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.1    0.0011         4      56     107 ..      70     123 ..      31     125 .. 0.81
   2 ?   -0.4   0.8      0.47   1.7e+03      20      46 ..     199     227 ..     159     254 .. 0.58
   3 ?    6.3   1.3    0.0038        14       9      65 ..     278     336 ..     273     352 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0011
      FAM104  56 pesslnqivaesspntpqflqEqsalsqgpyfhINqiLk..EahfhslQqRGrp 107
                  ess+++i++++    +    E+ al+q     + +  +  ++h+++lQ+RG+ 
  KHJ34886.1  70 KESSISKIIIDKYDKAQALQSEKIALAQKCQLIVDKHTRnlDIHIKALQDRGEF 123
                 5999********99999999*********99999999997889*********85 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.47
      FAM104  20 Rskrnsvl..qdswdtEsssSdsesssss 46 
                 R+ r++ +   +++++ +ssS+  ++sss
  KHJ34886.1 199 RQARETSIslGNKKQNIFSSSNILGTSSS 227
                 33332222222333333555555555553 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.0038
      FAM104   9 eednhllpqpkRskrnsvlqdswdtEsssSdsessss..sinspdrasgpesslnqiva 65 
                 ++ +  l + kR+ +++ l  s+d E s  +s+s++    +++p r+  +e+  + i +
  KHJ34886.1 278 KQKKSGLSRLKRTGNKTSLSPSQDGEHSGAESGSIHDddEVHTPKRNQDAEGDEEMIDP 336
                 55566678899***************9999999998888999**999998887666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       924  (0.0515366); expected 358.6 (0.02)
Passed bias filter:                      574  (0.0320152); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 2920.28
//
Query:       KHJ34887.1  [L=438]
Description: putative copii-coated vesicle membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.9e-85  284.9   0.0    7.4e-85  284.3   0.0    1.3  1  COPIIcoated_ERV  Endoplasmic reticulum vesicle transporter
    6.8e-30  103.3   0.1    1.8e-29  101.9   0.0    1.7  2  ERGIC_N          Endoplasmic Reticulum-Golgi Intermediate Com
  ------ inclusion threshold ------
      0.043   14.1   0.5      0.087   13.1   0.5    1.4  1  DUF4900          Domain of unknown function (DUF4900)


Domain annotation for each model (and alignments):
>> COPIIcoated_ERV  Endoplasmic reticulum vesicle transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  284.3   0.0   1.2e-88   7.4e-85       1     221 []     142     420 ..     142     420 .. 0.97

  Alignments for each domain:
  == domain 1  score: 284.3 bits;  conditional E-value: 1.2e-88
  COPIIcoated_ERV   1 CYgaeeee.....kCCntCedVreaYkkkgwafkdgeeieqCeregykeklkeqkkegCrikGklevnkvaGnfhiapgksfqeekrhvhdlss 89 
                      CYgae++      +CC tC++VreaY++++waf +g+++eqCere+y+e+l+eq++egCri+G ++vnkv Gnfhiapg+sf+++++hvhdl++
       KHJ34887.1 142 CYGAEAPPnakkpGCCSTCDEVREAYATNSWAFGRGDSVEQCEREHYAERLDEQRNEGCRIEGAIRVNKVVGNFHIAPGRSFSNGNVHVHDLNN 235
                      *****9999999********************************************************************************99 PP

  COPIIcoated_ERV  90 yeke....klnfsHtihkLsfgeelpgek...............knPLdgtkkeeeekalmfqYflkvvptkyekldkkk.............. 150
                      y ++     + f+H+ih+L+fg++lp+++                nPLd+t+++++e a++f+Yf+kvv+t+y +l+++k              
       KHJ34887.1 236 YFDTpvlgGHVFTHIIHSLRFGPQLPTTAlmklskqntlwtnhhINPLDNTQQSTDEPAYNFMYFIKVVSTSYLPLGWEKkdyehhgldesasl 329
                      997345679******************99*************999*******************************998779************ PP

  COPIIcoated_ERV 151 ..........ietnqysvtehersleggkde.........sekglPGvffsYeisPlkvivkeerk.sflhfltslcaiiGGvltvasliD 221
                                +et+qysvt+h+rsl gg+d+         +++g+PGvffsY+isP+k++++eer+ sf++fl +lcai+GG+ltva++iD
       KHJ34887.1 330 gvyghkddgsLETHQYSVTSHHRSLGGGDDSasghkekihARGGIPGVFFSYDISPMKIVNREERSkSFTGFLSGLCAIVGGTLTVAAAID 420
                      ****************************999*********99**********************999***********************9 PP

>> ERGIC_N  Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.9   0.0     3e-33   1.8e-29       1      90 [.       7      96 ..       7      97 .. 0.98
   2 ?   -2.4   0.1       1.1   6.5e+03      17      35 ..     396     413 ..     386     419 .. 0.52

  Alignments for each domain:
  == domain 1  score: 101.9 bits;  conditional E-value: 3e-33
                XXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXX-EEEEEE--S--SEEEEEEEEEE.SS-GGGEEEEEEETTECEE CS
     ERGIC_N  1 lrrfDafpKvpedltqktlsGgiislvcillilfLllselteylttevkeelvvdksrsekleinlditfpalpCellsldvqDesgehe 90
                + r+Daf+K+ ++ + +t+sGgi+++v++l+i++L + e+++++++ v++el+vdk r+ek+ei+l+itfp++pCell+ldv+D+sge++
  KHJ34887.1  7 FTRLDAFTKTVDEARIRTTSGGIVTIVSLLVIFWLAWGEWSDFRRVLVQPELIVDKGRGEKMEIHLNITFPKIPCELLTLDVMDVSGEQQ 96
                579***********99************************************************************************97 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 1.1
                 XXXXXXXXXXXXXXXXXXX CS
     ERGIC_N  17 ktlsGgiislvcillilfL 35 
                 k+++G ++s +c+++   L
  KHJ34887.1 396 KSFTG-FLSGLCAIVGGTL 413
                 45554.4555555554444 PP

>> DUF4900  Domain of unknown function (DUF4900)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.5   1.5e-05     0.087      50      84 ..     212     246 ..     205     249 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.5e-05
     DUF4900  50 sgdsvlFtsgtvfdGpvHtnerfgfsdtPwfaGev 84 
                  g+ ++ ++++  +G vH+ +  ++ dtP+++G+v
  KHJ34887.1 212 VGNFHIAPGRSFSNGNVHVHDLNNYFDTPVLGGHV 246
                 588899999************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (438 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3342.97
//
Query:       KHJ34888.1  [L=672]
Description: putative mrna export factor mex67 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-14   52.3   1.1    6.5e-14   51.3   1.1    1.5  1  TAP_C     TAP C-terminal domain
     0.0026   17.5   0.6     0.0084   15.9   0.6    2.0  1  LRR_8     Leucine rich repeat
     0.0029   17.4   0.0     0.0075   16.1   0.0    1.7  1  RRM_9     RNA recognition motif
     0.0096   15.4   0.8      0.058   12.9   0.4    2.3  3  LRR_9     Leucine-rich repeat
  ------ inclusion threshold ------
      0.046   14.2   5.7       0.15   12.6   3.6    2.6  2  LRR_4     Leucine Rich repeats (2 copies)


Domain annotation for each model (and alignments):
>> TAP_C  TAP C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.3   1.1   1.8e-17   6.5e-14       4      49 .]     624     667 ..     622     667 .. 0.97

  Alignments for each domain:
  == domain 1  score: 51.3 bits;  conditional E-value: 1.8e-17
                 HHHHHHH-B-HHHHHHHHSSTTT-HHHHHHHHHHHG..GGS-GGGB CS
       TAP_C   4 qafstqtgMnlewsqkcLeqnnWdyerAlqvFeelkakgkIPpeAF 49 
                 q+f++ tgM+l+++  cL+q++Wd ++A + F++ k  +++P++AF
  KHJ34888.1 624 QKFMEHTGMTLQYCLLCLQQAEWDVQKANELFNQKK--ASLPADAF 667
                 89**********************************..*******9 PP

>> LRR_8  Leucine rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.6   2.3e-06    0.0084       3      61 .]     285     347 ..     283     348 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 2.3e-06
                 -SEEE-TTS--SEE-TTS..STT-TT--EEE--SS---GGG..GGGGTT--S-.EEE--SS-- CS
       LRR_8   3 LtsLdLsnNrltslddea..FkglsnLkvLdLsnNllttls..pgafsgLpsLrsLdLsgNrL 61 
                  ts++L++N+l+sl+d +   ++++  k LdLs+N++  l     + + ++sL+ L +++N++
  KHJ34888.1 285 ITSISLTDNSLSSLNDIStlAQTFPDIKNLDLSRNKIPNLKalDAWQWKFRSLEILIIEDNPI 347
                 5899***********97622566************8877641147778999999999999986 PP

>> RRM_9  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   2.1e-06    0.0075      24      67 ..     152     194 ..     127     197 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2.1e-06
       RRM_9  24 trvalqnasveggvlvgyVktkkdaeeLlkwnGvrFAGnnLkie 67 
                 + v+++++   g++++++  +k+d+ ++lk+++v FAG +L+i+
  KHJ34888.1 152 MAVKIKKSWQVGDTVYITA-SKQDIAQILKLDNVLFAGATLSIK 194
                 4566665555599999998.88********************97 PP

>> LRR_9  Leucine-rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0      0.34   1.2e+03      98     129 ..     230     261 ..     216     275 .. 0.62
   2 !    6.8   0.1    0.0012       4.4      74     125 ..     265     321 ..     234     323 .. 0.80
   3 !   12.9   0.4   1.6e-05     0.058      68     153 ..     287     376 ..     281     385 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.34
       LRR_9  98 nelqeladldPlaslkklellsllknpvtnkk 129
                 n  ++l dl  l + ++l+ l l+k  v n+k
  KHJ34888.1 230 NAQHKLLDLSRLGTDPRLQALGLFKDGVKNEK 261
                 33455666666666666666666666666555 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0012
       LRR_9  74 nrivriaegl....eevlPnleelvltnnelqeladldPlas.lkklellsllknpv 125
                 n i+ i egl    ++    ++++ lt+n+l +l+d+  la+ ++++++l l +n +
  KHJ34888.1 265 NAIMAICEGLfktcQDKQDAITSISLTDNSLSSLNDISTLAQtFPDIKNLDLSRNKI 321
                 5666677766222234456789999***************95389999998888866 PP

  == domain 3  score: 12.9 bits;  conditional E-value: 1.6e-05
       LRR_9  68 tlllnnnrivriae..gleevlPnleelvltnnelqeladldPla.slkklellsllknpvt.nkkeyrlyviyklkqlrlldfrkvklk 153
                 +++l +n +  +++   l+++ P +++l l+ n++ +l  ld    ++++le+l + +np+  ++++ ++ ++ + ++l+ ++  +v+  
  KHJ34888.1 287 SISLTDNSLSSLNDisTLAQTFPDIKNLDLSRNKIPNLKALDAWQwKFRSLEILIIEDNPIEsHHPNLKTDLMKRYPRLHTINNLRVRSL 376
                 5667777777776533799***********************97549*************961568999999999999998888887765 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   3.6   4.1e-05      0.15       4      43 ..     286     325 ..     283     328 .. 0.82
   2 ?    1.2   0.1      0.15   5.4e+02      13      38 ..     324     349 ..     323     360 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.1e-05
                 -EEE--SS---E-S-...HHH.-TT--EEE-.-S-----GGGGX CS
       LRR_4   4 evLdLsnNqltdipl...lek.lpnLkeLdLsgNnlitdldeLk 43 
                 ++++L +N l++++    l++ +p+ k LdLs+N    ++++Lk
  KHJ34888.1 286 TSISLTDNSLSSLNDistLAQtFPDIKNLDLSRN----KIPNLK 325
                 7788999998888886556677************....777775 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.15
                 --E-S-.HHH-TT--EEE-.-S----- CS
       LRR_4  13 ltdipl.leklpnLkeLdLsgNnlitd 38 
                 l+ ++   +k+ +L+ L + +N +i++
  KHJ34888.1 324 LKALDAwQWKFRSLEILIIEDN-PIES 349
                 5666663448889999977666.6654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (672 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       710  (0.0396006); expected 358.6 (0.02)
Passed bias filter:                      594  (0.0331307); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 4744.17
//
Query:       KHJ34889.1  [L=562]
Description: putative major facilitator superfamily transporter protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-13   49.8  21.8    2.4e-13   49.8  21.8    2.0  3  MFS_1        Major Facilitator Superfamily
    0.00012   21.1   1.0    0.00012   21.1   1.0    3.6  4  Sugar_tr     Sugar (and other) transporter
  ------ inclusion threshold ------
       0.19   11.7   0.2       0.35   10.8   0.2    1.4  1  DUF4994      Domain of unknown function


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.07   4.2e+02     122     145 ..      85     109 ..      73     117 .. 0.81
   2 !   49.8  21.8     4e-17   2.4e-13      32     348 ..     135     508 ..      84     513 .. 0.70
   3 ?   -3.4   0.1      0.57   3.4e+03      88      99 ..     534     545 ..     518     556 .. 0.52

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.07
       MFS_1 122 aigllsagfslGailg.pllgglla 145
                 ai++l+ + s+G+++g ++l ++l+
  KHJ34889.1  85 AIAVLNCFLSAGIVFGyAALKPILI 109
                 8999999999999999666666665 PP

  == domain 2  score: 49.8 bits;  conditional E-value: 4e-17
       MFS_1  32 seigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwl..llvlrvlqGlgagalfpagaaliadwfpkeergraigllsa 128
                   ++l++t+  +g+ v++lp+G + d++G+r + l++ +++++g+ll++f++ l +   l++ ++ ++g ga++++ +  ++  fpk + g+ ++++s+
  KHJ34889.1 135 IRLNLMFTVAVVGTNVSALPVGIILDKYGPRICGLISSASLFIGALLFAFGADLKFdgYLIGYFFLAIG-GAFTSMPYFHLSNTFPK-NSGLILAMISG 231
                 44899***************************99999999999977777863332333***********.8****************.*********** PP

       MFS_1 129 gfslGailgpllggllasslg...Wravfyilaivsllafvlfllll........peepperkrkspkeee............................ 188
                 +f  +++l  +   +  +s+        f+i+ iv + +f+ + l++                   ++e++                            
  KHJ34889.1 232 AFDSSSALFLIYKNIYFQSGKslrPKKFFLIFLIVPVSVFL-VQLFFmpklsyksI----------GEEKGvenseqqttkiqddsnentallgaglak 319
                 *********88888888665566655558888888888877.34455243333331..........222222344666777888889999999999999 PP

       MFS_1 189 .......................kgtgpaplvpawkallkdpvl...willialllfffgfsg..lltllplylqevlgls...........glllagl 248
                                        +  ++++++ +w++++ + v    ++ +++ll+ f+++++  + +++ +  + ++ +            +++ ++ 
  KHJ34889.1 320 qnslvtsesvnylslesarkqaiEEEKKKKISGIWGIMHGKTVKdqiFSSWFILLTLFIVLQMirINYFIATV-HPQYEYIfgsfkdadeinAVFDIS- 416
                 9999999999999988888776655555555558888888885555434555555555566666755555552.333333333446777777999999. PP

       MFS_1 249 llallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllllvlvliGf.glgfvfpsllalasdlappeeagtasglfntags 346
                  l+++++vg    +++g ++d ++      l++++l+l+++  +    +  + +++++ v++ + +  f++++l   +++ ++    gt++gl+ ++++
  KHJ34889.1 417 -LPIGGIVG---IPFIGIILDNTST-----LSVFSLILTVATTIGSLGCLPYKWAAYSNVILFVlFRPFFYTALSDSTAKIFGFTTFGTVYGLMISISG 506
                 .99999999...788******9555.....444444444444444444444455555555544448888888888888888888888888888888777 PP

       MFS_1 347 lg 348
                 l 
  KHJ34889.1 507 LC 508
                 75 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 0.57
       MFS_1  88 llvlrvlqGlga 99 
                 ll++ ++ G+  
  KHJ34889.1 534 LLAATFVIGVVL 545
                 223333333222 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.1   1.0     2e-08   0.00012      26     115 ..     115     203 ..      87     209 .. 0.82
   2 !    3.3   3.3    0.0051        30     357     444 ..     197     285 ..     191     289 .. 0.76
   3 ?   -2.5   0.1      0.29   1.7e+03     240     274 ..     357     389 ..     325     392 .. 0.57
   4 ?   -0.0  10.8     0.052   3.1e+02     338     438 ..     453     552 ..     411     561 .. 0.79

  Alignments for each domain:
  == domain 1  score: 21.1 bits;  conditional E-value: 2e-08
                 HHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHH CS
    Sugar_tr  26 lkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGig 115
                  ++ +++ l+++   + ++++++ l++ +++vG  +++l +g++ d++G + + li+++ ++iga+l a+  +  ++  +++g +++ ig
  KHJ34889.1 115 RNYCTREELDQNIRVCVQQEIRLNLMFTVAVVGTNVSALPVGIILDKYGPRICGLISSASLFIGALLFAFGADL-KFDGYLIGYFFLAIG 203
                 3455566666666666669************************************************9998855.888888888888776 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.0051
                 HHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHH..HHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT-- CS
    Sugar_tr 357 alfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlan..flisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrt 444
                 ++f+a+ +  ++++p++++s +fp++   + ++i+ a    +   ++ + ++ +  +++   ++fl+f ++ v ++++ +ff+p    ++
  KHJ34889.1 197 YFFLAIGG-AFTSMPYFHLSNTFPKNSGLILAMISGAFDSSSAlfLIYKNIYFQSGKSLRPKKFFLIFLIVPVSVFLVQLFFMPKLSYKS 285
                 45555555.89**************999888888777654433114455666666677778***********************987665 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.29
                 ..HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHH CS
    Sugar_tr 240 aswkellssktvrqrlligvvlqifqqltGinaim 274
                 +  k+++++  ++   +i + l i+ q+  in+++
  KHJ34889.1 357 MHGKTVKDQ--IFSSWFILLTLFIVLQMIRINYFI 389
                 222333333..677788889999999998888875 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 0.052
                 HHHHTTSS......CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHH CS
    Sugar_tr 338 alllvaks...kaasivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifv 433
                  l         k+a++  +++++lf  +f + +    + +   +    v ++ ++i+  +n++ n l +l+++i++ +     vfl+ a +++ +++ +
  KHJ34889.1 453 SLG----ClpyKWAAYSNVILFVLFRPFFYTALSDSTAKIFGFTTFGTVYGLMISISGLCNFVTNGLDQLCYQIFHRNPIPINVFLLAATFVIGVVLCC 547
                 222....2333677777777777777777778877777777777888899999*************************99899****999999999999 PP

                 HHHS- CS
    Sugar_tr 434 fffvp 438
                 f+++ 
  KHJ34889.1 548 FVKLK 552
                 98875 PP

>> DUF4994  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   5.9e-05      0.35       5      71 ..     301     367 ..     298     369 .. 0.94

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 5.9e-05
     DUF4994   5 eapDSenvlkallGkdkkdReyvieqaanktlsvrkkkWkyiePskgpalikltkielGnskepqLy 71 
                 + +D  n   allG   +  + ++++ + + ls+ + + + ie +k+++++ +  i  G++ ++q++
  KHJ34889.1 301 KIQDDSNENTALLGAGLAKQNSLVTSESVNYLSLESARKQAIEEEKKKKISGIWGIMHGKTVKDQIF 367
                 5678889999*******************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (562 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       793  (0.04423); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 3945.56
//
Query:       KHJ34890.1  [L=157]
Description: putative avra10-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       683  (0.0380947); expected 358.6 (0.02)
Passed bias filter:                      444  (0.0247643); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1158.94
//
Query:       KHJ34891.1  [L=549]
Description: putative importin subunit alpha-1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.9e-96  312.5  19.2    8.9e-14   51.0   0.2    8.2  8  Arm           Armadillo/beta-catenin-like repeat
    1.7e-26   92.5   2.6    1.7e-26   92.4   0.7    2.0  2  IBB           Importin beta binding domain
    9.9e-23   80.2   7.7    9.2e-09   35.6   0.1    6.7  7  HEAT_EZ       HEAT-like repeat
    6.4e-21   73.7   5.0    1.5e-20   72.5   5.0    1.6  1  Arm_3         Atypical Arm repeat
      1e-19   70.7   0.1    7.1e-09   35.9   0.0    5.0  5  HEAT_2        HEAT repeats
    5.3e-18   63.6   4.3    3.2e-05   23.8   0.0    7.4  8  HEAT          HEAT repeat
    4.4e-08   32.9   0.0     0.0037   16.8   0.0    3.7  4  Arm_2         Armadillo-like
    5.8e-06   26.4   0.0       0.67   10.1   0.0    4.4  5  V-ATPase_H_C  V-ATPase subunit H
  ------ inclusion threshold ------
      0.012   15.3   0.0        6.7    6.2   0.0    3.9  4  NopRA1        Nucleolar pre-ribosomal-associated protein 1
      0.059   13.6   7.7        6.2    7.1   0.0    5.3  7  RICTOR_V      Rapamycin-insensitive companion of mTOR, domain
        1.4    9.8   5.2        3.4    8.6   0.0    4.2  5  HEAT_PBS      PBS lyase HEAT-like repeat
        6.6    6.4   6.3        9.4    5.9   6.3    1.2  1  NUSAP         Nucleolar and spindle-associated protein


Domain annotation for each model (and alignments):
>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.1   0.0   3.6e-14   5.4e-11       2      41 .]     115     154 ..     114     154 .. 0.97
   2 !   47.2   0.0   9.4e-16   1.4e-12       1      40 [.     156     195 ..     156     196 .. 0.95
   3 !   43.0   0.1     2e-14   2.9e-11       1      41 []     198     239 ..     198     239 .. 0.96
   4 !   24.1   0.1   1.7e-08   2.5e-05      13      41 .]     253     281 ..     250     281 .. 0.94
   5 !   30.6   0.0   1.6e-10   2.3e-07       2      40 ..     284     322 ..     283     323 .. 0.96
   6 !   51.0   0.2   5.9e-17   8.9e-14       1      41 []     325     365 ..     325     365 .. 0.96
   7 !   49.1   0.1   2.3e-16   3.4e-13       2      40 ..     368     406 ..     367     407 .. 0.94
   8 !   33.0   0.1   2.7e-11     4e-08       2      39 ..     413     450 ..     412     452 .. 0.96

  Alignments for each domain:
  == domain 1  score: 42.1 bits;  conditional E-value: 3.6e-14
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLaa 41 
                 ++++++vi+ G+v ++v++L+s+++ vq+eA+wAL+N+a+
  KHJ34891.1 115 NPPIEEVIKTGVVSRFVSFLRSPHTLVQFEACWALTNIAS 154
                 789***********************************96 PP

  == domain 2  score: 47.2 bits;  conditional E-value: 9.4e-16
                 SHHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   1 nsenkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 +s ++++vieaGavp +v+LL s+ ++v+e+A+wAL+N a
  KHJ34891.1 156 SSAQTQVVIEAGAVPLFVELLGSPEPDVREQAVWALGNVA 195
                 5789**********************************76 PP

  == domain 3  score: 43.0 bits;  conditional E-value: 2e-14
                 SHHHHHHHHHTTHHHHHHHHTT.TSSHHHHHHHHHHHHHHTT CS
         Arm   1 nsenkdavieaGavppLvrLLs.sedeevqeeAawALsNLaa 41 
                 ++ ++d+v ++Ga++pL++LL  s + +++++A+w+LsN ++
  KHJ34891.1 198 SPACRDYVLSCGALQPLLNLLGdSRKLSLLRNATWTLSNFCR 239
                 5789***********************************997 PP

  == domain 4  score: 24.1 bits;  conditional E-value: 1.7e-08
                 HHHHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm  13 avppLvrLLssedeevqeeAawALsNLaa 41 
                 a+p+L +L +s d+ev+ +A+wA+s+L++
  KHJ34891.1 253 ALPVLAKLVYSLDDEVLIDACWAISYLSD 281
                 89*************************95 PP

  == domain 5  score: 30.6 bits;  conditional E-value: 1.6e-10
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 +e ++avieaG+ ++Lv+LL + +++vq++A++ ++N+ 
  KHJ34891.1 284 NEKIQAVIEAGIPRRLVELLMHASTSVQTPALRSVGNIV 322
                 688**********************************96 PP

  == domain 6  score: 51.0 bits;  conditional E-value: 5.9e-17
                 SHHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHTT CS
         Arm   1 nsenkdavieaGavppLvrLLssedeevqeeAawALsNLaa 41 
                 ++ +++++i++Ga+p+L++LLss+++++++eA+w++sN++a
  KHJ34891.1 325 DDVQTQVIINCGALPALLSLLSSTKDGIRKEACWTISNITA 365
                 5789***********************************96 PP

  == domain 7  score: 49.1 bits;  conditional E-value: 2.3e-16
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 s +++avi+a+++ppL++LL+++d ++++eA+wA+sN +
  KHJ34891.1 368 STQIQAVIDANIIPPLIHLLTNGDLKTRKEACWAISNAT 406
                 569**********************************76 PP

  == domain 8  score: 33.0 bits;  conditional E-value: 2.7e-11
                 HHHHHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHH CS
         Arm   2 senkdavieaGavppLvrLLssedeevqeeAawALsNL 39 
                 ++++++++++G+++pL++LL ++d ++ ++A+  L N+
  KHJ34891.1 413 PDQIRYLVNQGCIKPLCDLLACPDNKIIQVALDGLENI 450
                 89***********************************9 PP

>> IBB  Importin beta binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.4   0.7   1.2e-29   1.7e-26       1      90 []      10     104 ..      10     104 .. 0.93
   2 ?   -2.2   0.0       3.8   5.7e+03      60      83 ..     489     512 ..     474     517 .. 0.74

  Alignments for each domain:
  == domain 1  score: 92.4 bits;  conditional E-value: 1.2e-29
                 XXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXX...........XXXXXXXXXXXX-----TT--------HHHHH CS
         IBB   1 RlksfKnkgk.daeelRrrReeeqvelRKqkreeqllKrRnvaa......eaaaeeeadseeeeeessaeekkleeleemvqgvnSddpelqleatq 90 
                 R+++fK+k++ ++eelRrrRee+qve+RK+kree+l+KrR +a+       a+  +e+ds+++  ++ +e++++e+l++mv+gv Sd+++lq+ at+
  KHJ34891.1  10 RRTQFKAKNTfKPEELRRRREEQQVEIRKAKREENLAKRRGIATgdgsrpGASLGAEPDSDDD--TAPTESQLNEDLPQMVAGVISDQVDLQIHATT 104
                 99****************************************989999886666677778777..67999*************************97 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 3.8
                 XXXXXXXXXXX-----TT------ CS
         IBB  60 ssaeekkleeleemvqgvnSddpe 83 
                 ++a+e+  ++  +m+++ +Sd+ e
  KHJ34891.1 489 TNANEEIYMKAYNMIEKYFSDEDE 512
                 556667777888899999998776 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.0     0.002         3      29      55 .]     126     152 ..     122     152 .. 0.92
   2 !   35.6   0.1   6.2e-12   9.2e-09       3      54 ..     141     193 ..     139     194 .. 0.88
   3 !    7.6   0.1    0.0036       5.4      30      54 ..     211     236 ..     209     237 .. 0.89
   4 ?    5.8   0.1     0.014        21      29      55 .]     253     279 ..     248     279 .. 0.89
   5 ?    0.9   0.0      0.45   6.7e+02      29      55 .]     295     321 ..     280     331 .. 0.85
   6 !   14.3   0.0     3e-05     0.045      29      55 .]     337     363 ..     336     363 .. 0.96
   7 !   13.5   0.0   5.3e-05     0.079      28      54 ..     378     404 ..     367     405 .. 0.94

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.002
     HEAT_EZ  29 ilpaLlalLnddsdeVRaaAagaLgnl 55 
                 ++  ++++L++++ +V+  A++aL+n+
  KHJ34891.1 126 VVSRFVSFLRSPHTLVQFEACWALTNI 152
                 78899********************97 PP

  == domain 2  score: 35.6 bits;  conditional E-value: 6.2e-12
     HEAT_EZ   3 vRraAawaLGr.laggepellqplvpeilpaLlalLnddsdeVRaaAagaLgn 54 
                 v++ A+waL + + g  ++++      ++p+++ lL +++++VR++A++aLgn
  KHJ34891.1 141 VQFEACWALTNiASGSSAQTQVVIEAGAVPLFVELLGSPEPDVREQAVWALGN 193
                 89*******9966655566677799***************************9 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.0036
     HEAT_EZ  30 lpaLlalLnddsd.eVRaaAagaLgn 54 
                 l +Ll+lL d+ + +   +A ++L+n
  KHJ34891.1 211 LQPLLNLLGDSRKlSLLRNATWTLSN 236
                 6689*********888*********9 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.014
     HEAT_EZ  29 ilpaLlalLnddsdeVRaaAagaLgnl 55 
                 +lp L++l  + +deV   A++a++ l
  KHJ34891.1 253 ALPVLAKLVYSLDDEVLIDACWAISYL 279
                 689999999999************975 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.45
     HEAT_EZ  29 ilpaLlalLnddsdeVRaaAagaLgnl 55 
                 i + L+ lL++ s +V++ A++  gn+
  KHJ34891.1 295 IPRRLVELLMHASTSVQTPALRSVGNI 321
                 567899999999999999888888876 PP

  == domain 6  score: 14.3 bits;  conditional E-value: 3e-05
     HEAT_EZ  29 ilpaLlalLnddsdeVRaaAagaLgnl 55 
                 +lpaLl+lL++ +d +R+ A+++++n+
  KHJ34891.1 337 ALPALLSLLSSTKDGIRKEACWTISNI 363
                 69***********************97 PP

  == domain 7  score: 13.5 bits;  conditional E-value: 5.3e-05
     HEAT_EZ  28 eilpaLlalLnddsdeVRaaAagaLgn 54 
                  i+p+L+ lL++ + ++R+ A++a++n
  KHJ34891.1 378 NIIPPLIHLLTNGDLKTRKEACWAISN 404
                 69***********************98 PP

>> Arm_3  Atypical Arm repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.5   5.0     1e-23   1.5e-20       1      48 [.     469     516 ..     469     521 .. 0.90

  Alignments for each domain:
  == domain 1  score: 72.5 bits;  conditional E-value: 1e-23
       Arm_3   1 npyalliEeagGldkIeaLQnheneeIYkkAlkIiekYFseeeeedde 48 
                 n+yal+iEe+ G++kI+++Q++ neeIY kA++ iekYFs+e+e d+ 
  KHJ34891.1 469 NQYALFIEECHGMEKIHDCQTNANEEIYMKAYNMIEKYFSDEDEADET 516
                 89****************************************775333 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   0.0   4.7e-12   7.1e-09       4      86 ..     130     233 ..     127     235 .. 0.80
   2 ?    3.4   0.0     0.069     1e+02       3      67 ..     213     290 ..     211     295 .. 0.57
   3 ?    3.3   0.0     0.075   1.1e+02       4      58 ..     257     321 ..     251     332 .. 0.64
   4 !   16.9   0.0   4.1e-06    0.0061       4      66 ..     299     373 ..     295     379 .. 0.78
   5 !    9.4   0.0   0.00092       1.4       1      55 [.     380     447 ..     379     461 .. 0.66

  Alignments for each domain:
  == domain 1  score: 35.9 bits;  conditional E-value: 4.7e-12
      HEAT_2   4 LlqalendpdpevrraairaLgrignp...........ealpaLvellededpavRraaaeaLgaig..dpe.........alpaLkellddddd.dvv 79 
                 ++++l ++p++ v+ +a++aL +i++             a+p++vell +++p+vR++a++aLg ++  +p+         al+ L+ ll d ++ ++ 
  KHJ34891.1 130 FVSFL-RSPHTLVQFEACWALTNIASGssaqtqvvieaGAVPLFVELLGSPEPDVREQAVWALGNVAgdSPAcrdyvlscgALQPLLNLLGDSRKlSLL 227
                 67889.9***************888775566777776677************************99633344667777777999999999988875666 PP

      HEAT_2  80 ReaAaea 86 
                 R+ A+++
  KHJ34891.1 228 RN-ATWT 233
                 65.4655 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.069
      HEAT_2   3 aLlqalendpdp.evrraairaLgrignp...........ealpaLvellededpavRraaaeaLgai..gdpealpaL 67 
                 +Ll++l  d+ +  + r+a ++L ++               alp L +l+ + d +v   a++a++ +  g +e ++a 
  KHJ34891.1 213 PLLNLL-GDSRKlSLLRNATWTLSNFCRGktpqpdwntilPALPVLAKLVYSLDDEVLIDACWAISYLsdGANEKIQAV 290
                 666666.433331466777777774433211233444444448888888877777888888888877733346666665 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.075
      HEAT_2   4 LlqalendpdpevrraairaLgrignp...........ealpaLvellededpavRraaaeaLgai 58 
                 L +++  + d+ev + a++a+  + +             + + Lvell ++++ v+  a ++ g i
  KHJ34891.1 257 LAKLV-YSLDDEVLIDACWAISYLSDGanekiqavieaGIPRRLVELLMHASTSVQTPALRSVGNI 321
                 44433.677888888888888844332223444444333366788888888888888888888877 PP

  == domain 4  score: 16.9 bits;  conditional E-value: 4.1e-06
      HEAT_2   4 LlqalendpdpevrraairaLgri..gnp.........ealpaLvellededpavRraaaeaLgai..gdpealpa 66 
                 L+++l  ++++ v+  a+r+ g+i  g++          alpaL++ll++++  +R++a+++++ i  g++  ++a
  KHJ34891.1 299 LVELL-MHASTSVQTPALRSVGNIvtGDDvqtqviincGALPALLSLLSSTKDGIRKEACWTISNItaGNSTQIQA 373
                 77888.79999***********552233355557777799***********************9994445555555 PP

  == domain 5  score: 9.4 bits;  conditional E-value: 0.00092
      HEAT_2   1 ldaLlqalendpdpevrraairaLg..............rignpealpaLvellededpavRraaaeaL 55 
                 +++L+ +l +  d ++r++a++a+                + n+ +++ L +ll ++d  + + a + L
  KHJ34891.1 380 IPPLIHLL-TNGDLKTRKEACWAISnatsgglqkpdqirYLVNQGCIKPLCDLLACPDNKIIQVALDGL 447
                 57888888.788888888888888877777554444332223446677777777777776666666666 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   0.0    0.0015       2.3       3      30 ..     128     155 ..     126     156 .. 0.89
   2 !   23.8   0.0   2.1e-08   3.2e-05       2      28 ..     169     195 ..     168     197 .. 0.95
   3 ?    0.9   0.0       0.5   7.4e+02       2      29 ..     211     239 ..     210     240 .. 0.73
   4 ?   -0.6   0.1       1.5   2.3e+03       2      28 ..     254     280 ..     253     283 .. 0.82
   5 ?    3.6   0.0     0.067     1e+02       5      29 ..     299     323 ..     295     324 .. 0.89
   6 !   11.3   0.0   0.00023      0.35       2      28 ..     338     364 ..     337     366 .. 0.94
   7 !    8.3   0.0     0.002       3.1       1      26 [.     379     404 ..     379     408 .. 0.92
   8 ?   -2.4   0.0       5.9   8.8e+03       9      29 ..     428     452 ..     424     453 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0015
                 HHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT   3 PlllkllsDpspeVReaAakaLgalaev 30 
                   +++ l++p+  V   A++aL+++a++
  KHJ34891.1 128 SRFVSFLRSPHTLVQFEACWALTNIASG 155
                 6788899*******************97 PP

  == domain 2  score: 23.8 bits;  conditional E-value: 2.1e-08
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 +Pl+++ll +p+p+VRe A++aLg++a
  KHJ34891.1 169 VPLFVELLGSPEPDVREQAVWALGNVA 195
                 7***********************986 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.5
                 HHHHHHHHT-SSHH.HHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspe.VReaAakaLgalae 29 
                 l +ll+ll D+      ++A ++L ++++
  KHJ34891.1 211 LQPLLNLLGDSRKLsLLRNATWTLSNFCR 239
                 56778888775555378899999999996 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 1.5
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 lP+l kl  + + eV   A++a+  l+
  KHJ34891.1 254 LPVLAKLVYSLDDEVLIDACWAISYLS 280
                 799999989999999999999998766 PP

  == domain 5  score: 3.6 bits;  conditional E-value: 0.067
                 HHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgalae 29 
                 l++ll++ s +V   A++++g+++ 
  KHJ34891.1 299 LVELLMHASTSVQTPALRSVGNIVT 323
                 89********************985 PP

  == domain 6  score: 11.3 bits;  conditional E-value: 0.00023
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 lP+ll+lls++   +R+ A++++ ++ 
  KHJ34891.1 338 LPALLSLLSSTKDGIRKEACWTISNIT 364
                 8***********************996 PP

  == domain 7  score: 8.3 bits;  conditional E-value: 0.002
                 HHHHHHHHHT-SSHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLga 26 
                 ++P+l++ll+  + + R+ A++a+ +
  KHJ34891.1 379 IIPPLIHLLTNGDLKTRKEACWAISN 404
                 89*********************986 PP

  == domain 8  score: -2.4 bits;  conditional E-value: 5.9
                 HT-....SSHHHHHHHHHHHHHHHH CS
        HEAT   9 lsD....pspeVReaAakaLgalae 29 
                 l+D    p+ ++ + A+  L ++++
  KHJ34891.1 428 LCDllacPDNKIIQVALDGLENILK 452
                 4455555888888899999998887 PP

>> Arm_2  Armadillo-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.0    0.0056       8.4      28      81 ..     140     194 ..     118     201 .. 0.79
   2 !    6.3   0.0    0.0038       5.7       6     130 ..     203     329 ..     198     335 .. 0.81
   3 !   16.8   0.0   2.5e-06    0.0037       8     113 ..     332     442 ..     326     453 .. 0.78
   4 ?   -1.2   0.0      0.75   1.1e+03      49      87 ..     474     512 ..     467     518 .. 0.80

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0056
       Arm_2  28 liqeialltlgnsaaysvnq.diirdlggitiianllsksnaevkekalnalnnl 81 
                 l+q  a  +l+n a  s +q +++ + g +++  +ll ++++ v+e+a+ al n 
  KHJ34891.1 140 LVQFEACWALTNIASGSSAQtQVVIEAGAVPLFVELLGSPEPDVREQAVWALGNV 194
                 5555666777777666555427899***************************986 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0038
       Arm_2   6 devLepkelekllalLkssedpliqeialltlgnsaaysvnq.diirdlggitiianllsksnaevkekalnalnnlsenven..qkkikvyvnqvckd 101
                 d vL+   l+ ll+lL  s++ ++ + a+ tl+n       q d    l  ++++a+l+ + + ev   a  a+  ls+++++  q  i++ +++ + +
  KHJ34891.1 203 DYVLSCGALQPLLNLLGDSRKLSLLRNATWTLSNFCRGKTPQpDWNTILPALPVLAKLVYSLDDEVLIDACWAISYLSDGANEkiQAVIEAGIPRRLVE 301
                 5569999***************************87776666366666899************************999977662255688888887777 PP

       Arm_2 102 ivssplNsevQlagLklltnlsvtneyqh 130
                  ++    ++vQ  +L+ ++n+ + ++ q 
  KHJ34891.1 302 LLMH-ASTSVQTPALRSVGNIVTGDDVQT 329
                 6654.467899999999999988877664 PP

  == domain 3  score: 16.8 bits;  conditional E-value: 2.5e-06
       Arm_2   8 vLepkelekllalLkssedpliqeialltlgnsaaysvnqdiirdlggitiianllsksnaevkekalnal.nnlsenvenqkkikvyvnqvck....d 101
                 +++   l  ll+lL s++d + +e+   +  + a  s   + + d  +i+ + +ll + + + ++ a  a+ n+ s + ++ ++i+  vnq c     d
  KHJ34891.1 332 IINCGALPALLSLLSSTKDGIRKEACWTISNITAGNSTQIQAVIDANIIPPLIHLLTNGDLKTRKEACWAIsNATSGGLQKPDQIRYLVNQGCIkplcD 430
                 567778999**********9777766666666677777778999******999***********999999835578899************99612224 PP

       Arm_2 102 ivssplNsevQl 113
                  +++p N  +Q+
  KHJ34891.1 431 LLACPDNKIIQV 442
                 555665655555 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.75
       Arm_2  49 iirdlggitiianllsksnaevkekalnalnnlsenven 87 
                 +i++  g+  i ++  + n+e++ ka n++++  + +++
  KHJ34891.1 474 FIEECHGMEKIHDCQTNANEEIYMKAYNMIEKYFSDEDE 512
                 68888899999999999***********99976555554 PP

>> V-ATPase_H_C  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.0     0.028        41      43     110 ..     126     192 ..     101     197 .. 0.85
   2 !   10.1   0.0   0.00045      0.67      47     113 ..     257     322 ..     249     325 .. 0.89
   3 !    7.2   0.0    0.0035       5.2      44     112 ..     296     363 ..     292     368 .. 0.88
   4 ?    0.2   0.0      0.51   7.7e+02      46     105 ..     340     398 ..     327     406 .. 0.53
   5 ?    5.0   0.1     0.017        25      42     113 ..     423     507 ..     414     510 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.028
  V-ATPase_H_C  43 llkkLiklleeskdktvlavalnDigelvkllpegkkvleklkaKekimellehedeevkyeALkavq 110
                   ++++ +++l +s ++ v+  a+  ++++++  + + +v+ + +a    +ell +++++v+ +A  a+ 
    KHJ34891.1 126 VVSRFVSFL-RSPHTLVQFEACWALTNIASGSSAQTQVVIEAGAVPLFVELLGSPEPDVREQAVWALG 192
                   566677777.4566677777999999999999999****************************98876 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00045
  V-ATPase_H_C  47 LiklleeskdktvlavalnDigelvkllpegkkvleklkaKekimellehedeevkyeALkavqkll 113
                   L+kl++ s d++vl  a+  i+ l + ++e+ + + + ++  +++ell h+ ++v+  AL++v +++
    KHJ34891.1 257 LAKLVY-SLDDEVLIDACWAISYLSDGANEKIQAVIEAGIPRRLVELLMHASTSVQTPALRSVGNIV 322
                   667774.667888999***********************************************9987 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.0035
  V-ATPase_H_C  44 lkkLiklleeskdktvlavalnDigelvkllpegkkvleklkaKekimellehedeevkyeALkavqkl 112
                    ++L++ll  +++++v++ al  +g++v+  + + +v+ + +a   +++ll+++ + +++eA  +++++
    KHJ34891.1 296 PRRLVELL-MHASTSVQTPALRSVGNIVTGDDVQTQVIINCGALPALLSLLSSTKDGIRKEACWTISNI 363
                   58999999.46778889999**********9*9*****************************9999876 PP

  == domain 4  score: 0.2 bits;  conditional E-value: 0.51
  V-ATPase_H_C  46 kLiklleeskdktvlavalnDigelvkllpegkkvleklkaKekimellehedeevkyeA 105
                   +L++ll+ s+++ +   a+  i++++   +++ + + + ++   +++ll++ d + ++eA
    KHJ34891.1 340 ALLSLLS-STKDGIRKEACWTISNITAGNSTQIQAVIDANIIPPLIHLLTNGDLKTRKEA 398
                   4555552.3334444445555555555555555555555555555556666665555555 PP

  == domain 5  score: 5.0 bits;  conditional E-value: 0.017
  V-ATPase_H_C  42 kllkkLiklleeskdktvlavalnDigelvkllpegkkvl..............eklkaKekimellehedeevkyeALkavqkll 113
                     +k L++ll +  d+++++val  +++++k+ +  k+                e+ ++ eki ++ ++++ee+ ++A + ++k+ 
    KHJ34891.1 423 GCIKPLCDLL-ACPDNKIIQVALDGLENILKVGEMDKDAAgegqesinqyalfiEECHGMEKIHDCQTNANEEIYMKAYNMIEKYF 507
                   5788999999.588899999999999999988665555554444444555666677777999999999999999999988887765 PP

>> NopRA1  Nucleolar pre-ribosomal-associated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.31   4.7e+02     106     134 ..     167     192 ..     160     205 .. 0.74
   2 ?    6.2   0.0    0.0045       6.7     107     199 ..     253     338 ..     241     340 .. 0.88
   3 ?    1.1   0.0      0.17   2.5e+02       3      27 ..     340     364 ..     338     371 .. 0.59
   4 ?    1.8   0.0       0.1   1.5e+02     101     164 ..     373     434 ..     369     459 .. 0.79

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.31
      NopRA1 106 ndvPlfysllyssseedeeykkersWiLr 134
                   vPlf +ll s + +   ++++  W L 
  KHJ34891.1 167 GAVPLFVELLGSPEPD---VREQAVWALG 192
                 5677777777777777...7777777764 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0045
      NopRA1 107 dvPlfysllyssseedeeykkersWiLrlladGlrtksDlkllkrrrvfelllslynsplldaklrelilelllratrieggattLitrsGll 199
                  +P + +l+ys ++e   +     W + +l dG ++k         ++  +l+ l +   +++++++  l+ + ++++ +++ t+ i ++G l
  KHJ34891.1 253 ALPVLAKLVYSLDDE---VLIDACWAISYLSDGANEKIQ--AVIEAGIPRRLVELLMH--ASTSVQTPALRSVGNIVTGDDVQTQVIINCGAL 338
                 578899999999999...99999***********98866..44455699999999998..9999**************************998 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.17
      NopRA1   3 llvlsLssedeeirrlAlavlskll 27 
                  l+  Lss+++ ir+ A  ++s++ 
  KHJ34891.1 340 ALLSLLSSTKDGIRKEACWTISNIT 364
                 4555666666666666666665554 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.1
      NopRA1 101 peldlndvPlfysllyssseedeeykkersWiLrllad.GlrtksDlkllkrrrvfelllslyns 164
                 + +d n +P + +ll++ + +    +ke  W +   +  Gl++++ ++ l  +++++ l+ l + 
  KHJ34891.1 373 AVIDANIIPPLIHLLTNGDLK---TRKEACWAISNATSgGLQKPDQIRYLVNQGCIKPLCDLLAC 434
                 5689999*************9...*******9987665278888889999999999999888875 PP

>> RICTOR_V  Rapamycin-insensitive companion of mTOR, domain 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.2    0.0095        14       6      55 ..     145     194 ..     142     195 .. 0.82
   2 ?    7.1   0.0    0.0041       6.2       5      57 ..     186     239 ..     182     243 .. 0.86
   3 ?   -2.0   0.0       2.9   4.3e+03       8      40 ..     274     307 ..     272     322 .. 0.62
   4 ?   -0.5   0.0         1   1.5e+03      51      63 ..     341     353 ..     336     354 .. 0.84
   5 ?    3.0   0.1      0.08   1.2e+02       4      38 ..     354     389 ..     351     394 .. 0.78
   6 ?   -1.4   0.0       1.9   2.9e+03       3      15 ..     395     407 ..     392     430 .. 0.82
   7 ?   -2.4   0.0       4.1   6.1e+03      10      24 ..     527     541 ..     525     544 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0095
    RICTOR_V   6 aLWaiGhigsselGie.lldeydivedivelaeespvlslRGtafyvLgli 55 
                 a Wa+ +i+s  +  + ++ e  +v+ +vel   sp   +R  a+++Lg +
  KHJ34891.1 145 ACWALTNIASGSSAQTqVVIEAGAVPLFVELL-GSPEPDVREQAVWALGNV 194
                 56********665555488888********87.789999999999999866 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0041
    RICTOR_V   5 aaLWaiGhigsselGie.lldeydivedivelaeespvlslRGtafyvLgliss 57 
                 +a Wa+G+++     ++ ++ ++ +++ +++l  +s  lsl   a + L+ +++
  KHJ34891.1 186 QAVWALGNVAGDSPACRdYVLSCGALQPLLNLLGDSRKLSLLRNATWTLSNFCR 239
                 799******99888887799999***********99999998777777777665 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 2.9
    RICTOR_V   8 WaiGhigs.selGielldeydivedivelaeesp 40 
                 Wai +    +++ i+ + e  i  ++vel ++++
  KHJ34891.1 274 WAISYLSDgANEKIQAVIEAGIPRRLVELLMHAS 307
                 6666666545566775555577777777666554 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 1
    RICTOR_V  51 vLglissteegae 63 
                  L+l+sst++g++
  KHJ34891.1 341 LLSLLSSTKDGIR 353
                 69*******9985 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.08
    RICTOR_V   4 KaaLWaiGhigs.selGie.lldeydivedivelaee 38 
                 K a W+i +i +     i+ ++d  +i++ +++l ++
  KHJ34891.1 354 KEACWTISNITAgNSTQIQaVIDA-NIIPPLIHLLTN 389
                 8999******99555678845555.999999988776 PP

  == domain 6  score: -1.4 bits;  conditional E-value: 1.9
    RICTOR_V   3 lKaaLWaiGhigs 15 
                 +K a Wai +  s
  KHJ34891.1 395 RKEACWAISNATS 407
                 68999***99877 PP

  == domain 7  score: -2.4 bits;  conditional E-value: 4.1
    RICTOR_V  10 iGhigsselGielld 24 
                 +G+ gs++ G+++  
  KHJ34891.1 527 FGNTGSQTGGFNFAP 541
                 79********99875 PP

>> HEAT_PBS  PBS lyase HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   0.0    0.0023       3.4       1      17 [.     183     201 ..     183     208 .. 0.81
   2 ?   -2.4   0.1       7.9   1.2e+04      17      27 .]     210     220 ..     210     220 .. 0.85
   3 ?   -0.9   0.0       2.6     4e+03       3      14 ..     228     239 ..     226     260 .. 0.66
   4 ?   -2.3   0.2       7.3   1.1e+04      17      26 ..     337     346 ..     337     347 .. 0.86
   5 ?   -0.7   0.0       2.2   3.3e+03      15      25 ..     377     387 ..     353     389 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.0023
                 HHHHHHHHHHHCTS..GGG CS
    HEAT_PBS   1 vRraAakaLgqlgd..eea 17 
                 vR  A++aLg++    +++
  KHJ34891.1 183 VREQAVWALGNVAGdsPAC 201
                 8**********98766665 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 7.9
                 GHHHHHHHCTC CS
    HEAT_PBS  17 aipaLleaLqd 27 
                 a+++Ll++L d
  KHJ34891.1 210 ALQPLLNLLGD 220
                 799***99976 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 2.6
                 HHHHHHHHHCTS CS
    HEAT_PBS   3 raAakaLgqlgd 14 
                 r+A++ L ++  
  KHJ34891.1 228 RNATWTLSNFCR 239
                 889999998865 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 7.3
                 GHHHHHHHCT CS
    HEAT_PBS  17 aipaLleaLq 26 
                 a+paLl +L 
  KHJ34891.1 337 ALPALLSLLS 346
                 89****9986 PP

  == domain 5  score: -0.7 bits;  conditional E-value: 2.2
                 GGGHHHHHHHC CS
    HEAT_PBS  15 eeaipaLleaL 25 
                   +ip+L+ +L
  KHJ34891.1 377 ANIIPPLIHLL 387
                 67899**9998 PP

>> NUSAP  Nucleolar and spindle-associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   6.3    0.0063       9.4     258     295 .]      16      51 ..       4      51 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0063
       NUSAP 258 hkknyKQpklqtreerRekheqeRkqkkekvlgarRGl 295
                  k+++K  +l+ r  r e++++ Rk k+e+ l++rRG+
  KHJ34891.1  16 AKNTFKPEELRRR--REEQQVEIRKAKREENLAKRRGI 51 
                 5778888888766..44678999**************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (549 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.47
# Mc/sec: 3524.47
//
Query:       KHJ34892.1  [L=1067]
Description: putative cell division control protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-40  136.5  18.9    1.7e-06   28.6   0.4    7.7  7  WD40         WD domain, G-beta repeat
    1.9e-11   43.7   0.2    4.2e-11   42.6   0.2    1.6  1  F-box-like   F-box-like
    6.6e-10   38.6   1.5    2.2e-09   36.9   0.4    2.5  2  F-box        F-box domain
    1.7e-06   28.3   0.8        3.5    8.0   0.0    5.0  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
    0.00046   19.0   7.1        3.3    6.3   0.1    5.3  5  Nup160       Nucleoporin Nup120/160
     0.0021   17.9   0.0     0.0052   16.7   0.0    1.7  1  F-box_4      F-box
     0.0056   15.7   1.2          3    6.7   0.1    3.7  4  PALB2_WD40   Partner and localizer of BRCA2 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.1   2.6e-05     0.068       7      38 .]     681     712 ..     676     712 .. 0.78
   2 !   23.9   0.0   2.1e-08   5.4e-05       5      38 .]     720     752 ..     716     752 .. 0.90
   3 !   17.8   0.0   1.8e-06    0.0046       3      37 ..     758     809 ..     756     810 .. 0.94
   4 !   24.8   0.2   1.1e-08   2.8e-05       4      38 .]     835     868 ..     833     868 .. 0.91
   5 !   17.2   0.3   2.6e-06    0.0068       1      38 []     872     910 ..     872     910 .. 0.91
   6 !   17.7   0.0   1.9e-06     0.005       1      38 []     914     950 ..     914     950 .. 0.78
   7 !   28.6   0.4   6.6e-10   1.7e-06       1      38 []     954     989 ..     954     989 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.6e-05
                 EESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ss.vtslafspdgawlasGsdDgtvriWd 38 
                 + +H  + +t+l+f++d+    +GsdD  + ++d
  KHJ34892.1 681 FPAHtAHvITCLQFDDDKII--TGSDDTLINVYD 712
                 678866666***77666666..9****9999998 PP

  == domain 2  score: 23.9 bits;  conditional E-value: 2.1e-08
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++l+GH ++v++l  + +g+ l+sGs D++vr+Wd
  KHJ34892.1 720 KKLEGHeGGVWAL--QYEGNVLVSGSTDRSVRVWD 752
                 6799**999****..888888*************9 PP

  == domain 3  score: 17.8 bits;  conditional E-value: 1.8e-06
                 EEEEEESS.SSEEEEE................EETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGH.ssvtsla................fspdgawlasGsdDgtvriW 37 
                 c++++ GH s v++l                   p+++++++Gs+D  +r+W
  KHJ34892.1 758 CTQVFHGHtSTVRCLLilmpqivdrtekkqpiMVPEKPLIITGSRDSQLRVW 809
                 899*****777**************99999999999999************* PP

  == domain 4  score: 24.8 bits;  conditional E-value: 1.1e-08
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 +r+ltGH  sv+++  s +++ l+sGs+D+tvr+W+
  KHJ34892.1 835 IRILTGHaHSVRAI--SAHQDTLVSGSYDNTVRVWK 868
                 689****666**99..999****************6 PP

  == domain 5  score: 17.2 bits;  conditional E-value: 2.6e-06
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 gq+++ ltGH   v+s+  ++  +  +sGs+D+ v+iW+
  KHJ34892.1 872 GQTIHRLTGHtMKVYSVVLDHKRDRCISGSMDNFVKIWS 910
                 6899******655*****999999999***********5 PP

  == domain 6  score: 17.7 bits;  conditional E-value: 1.9e-06
                 TEEEEEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGHssvtslafspdgawlasGsdDgtvriWd 38 
                 g cl tl+GH+s  +l   ++ ++++++  D t+riWd
  KHJ34892.1 914 GACLFTLEGHTSLVGLLDLHNERLVSAAA-DSTLRIWD 950
                 579*******7744776667777765555.*******9 PP

  == domain 7  score: 28.6 bits;  conditional E-value: 6.6e-10
                 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 gqc  tl++H + +t++  ++dg+ ++sGs D+t+++W+
  KHJ34892.1 954 GQCKSTLSAHtGAITCF--QHDGQKVISGS-DRTLKLWN 989
                 79********777**99..***********.*******8 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6   0.2   1.6e-14   4.2e-11       2      46 ..     472     516 ..     471     518 .. 0.94

  Alignments for each domain:
  == domain 1  score: 42.6 bits;  conditional E-value: 1.6e-14
  F-box-like   2 srLPdEiLlqIFsyLppsdLlrlalVCrrWrrvaldtplLWrrlv 46 
                 ++LP E+ lqI+s+L+ +dL+r a+V+++Wr+++ ++   W++l+
  KHJ34892.1 472 AQLPFELSLQILSFLDHRDLCRSAQVSKQWRNIIDSNETGWKELF 516
                 68********************************99999999987 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.96   2.5e+03      26      41 ..     447     462 ..     440     468 .. 0.85
   2 !   36.9   0.4   8.6e-13   2.2e-09       3      40 ..     471     508 ..     469     516 .. 0.92

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.96
                 HCTT-HHHHHHHTTHH CS
       F-box  26 lrrVSkgwrilidsdr 41 
                 lr +Sk+   +i +++
  KHJ34892.1 447 LRGCSKRTLHIIADIV 462
                 8999**9999999886 PP

  == domain 2  score: 36.9 bits;  conditional E-value: 8.6e-13
                 HHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTH CS
       F-box   3 lsrLPsevlrhILerLplsdllalrrVSkgwrilidsd 40 
                 l +LP e+ ++IL++L+++dl++ ++VSk wr++ids 
  KHJ34892.1 471 LAQLPFELSLQILSFLDHRDLCRSAQVSKQWRNIIDSN 508
                 678*********************************96 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.51   1.3e+03      43      87 ..     691     732 ..     682     735 .. 0.75
   2 !    7.6   0.0    0.0018       4.7      47      87 ..     733     772 ..     717     775 .. 0.86
   3 !    8.0   0.0    0.0014       3.5      39      84 ..     843     885 ..     791     898 .. 0.72
   4 ?   -1.4   0.0       1.2     3e+03      55      81 ..     899     925 ..     882     935 .. 0.80
   5 !    6.0   0.0    0.0055        14      50      88 ..     934     971 ..     904     975 .. 0.85
   6 ?   -1.1   0.0      0.96   2.5e+03      46      77 ..     970    1000 ..     969    1012 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.51
  ANAPC4_WD40  43 sLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  +L++  d+  +  + +d+ ++++d +sg   ++l+ ++   v  l
   KHJ34892.1 691 CLQF--DDDKIITGSDDTLINVYDTKSGAFRKKLEGHEGG-VWAL 732
                  4444..55567789999***********999999887763.5555 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0018
  ANAPC4_WD40  47 kpdgklLavaysdgevrlldaesgkvvhslsvksekavtcl 87 
                  + +g++L+ +  d +vr+ d+e+g + + ++ +++ +v cl
   KHJ34892.1 733 QYEGNVLVSGSTDRSVRVWDIEKGLCTQVFHGHTS-TVRCL 772
                  5589*********************9999988877.58887 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0014
  ANAPC4_WD40  39 sevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekav 84 
                  ++vr+++ +     L+ +  d++vr+ ++++g+++h l+ ++ k v
   KHJ34892.1 843 HSVRAISAH--QDTLVSGSYDNTVRVWKISTGQTIHRLTGHTMK-V 885
                  555655544..45799*********************9988764.4 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 1.2
  ANAPC4_WD40  55 vaysdgevrlldaesgkvvhslsvkse 81 
                   +  d+ v++ ++ +g ++ +l+ +++
   KHJ34892.1 899 SGSMDNFVKIWSIDTGACLFTLEGHTS 925
                  6778999*********99999877665 PP

  == domain 5  score: 6.0 bits;  conditional E-value: 0.0055
  ANAPC4_WD40  50 gklLavaysdgevrlldaesgkvvhslsvksekavtclg 88 
                  ++ L+ a +d+++r+ d  +g++ ++ls+++  a+tc +
   KHJ34892.1 934 NERLVSAAADSTLRIWDPGNGQCKSTLSAHTG-AITCFQ 971
                  467999************************99.699986 PP

  == domain 6  score: -1.1 bits;  conditional E-value: 0.96
  ANAPC4_WD40   46 WkpdgklLavaysdgevrlldaesgkvvhsls 77  
                   +++dg+  +++ sd +++l ++++g++++ l 
   KHJ34892.1  970 FQHDGQK-VISGSDRTLKLWNIKTGECLKDLL 1000
                   6666666.45678999**********998765 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0     0.033        85     231     255 ..     737     761 ..     731     768 .. 0.87
   2 !    6.3   0.1    0.0013       3.3     226     253 ..     848     875 ..     841     885 .. 0.84
   3 !    3.5   0.0    0.0084        22     235     255 ..     899     919 ..     875     925 .. 0.79
   4 ?    2.2   0.0     0.021        55     230     255 ..     934     959 ..     922     969 .. 0.85
   5 !    4.0   0.1    0.0061        16     238     254 ..     981     997 ..     977    1026 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.033
                 TEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 231 tylfalsrdgkLrvWnlltgkclat 255
                 ++l++ s d+ +rvW+++ g c+ +
  KHJ34892.1 737 NVLVSGSTDRSVRVWDIEKGLCTQV 761
                 78888899**********9999875 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0013
                 ...TTTEEEEEETT-EEEEEETTTTEEE CS
      Nup160 226 veigqtylfalsrdgkLrvWnlltgkcl 253
                 ++++q++l++ s d+++rvW ++tg+++
  KHJ34892.1 848 ISAHQDTLVSGSYDNTVRVWKISTGQTI 875
                 3339*********************987 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.0084
                 EEETT-EEEEEETTTTEEEEE CS
      Nup160 235 alsrdgkLrvWnlltgkclat 255
                 + s d+++++W+++tg cl t
  KHJ34892.1 899 SGSMDNFVKIWSIDTGACLFT 919
                 5589**************976 PP

  == domain 4  score: 2.2 bits;  conditional E-value: 0.021
                 TTEEEEEETT-EEEEEETTTTEEEEE CS
      Nup160 230 qtylfalsrdgkLrvWnlltgkclat 255
                 +  l+++  d +Lr+W+  +g+c +t
  KHJ34892.1 934 NERLVSAAADSTLRIWDPGNGQCKST 959
                 566889999**************888 PP

  == domain 5  score: 4.0 bits;  conditional E-value: 0.0061
                 TT-EEEEEETTTTEEEE CS
      Nup160 238 rdgkLrvWnlltgkcla 254
                 +d++L++Wn++tg cl 
  KHJ34892.1 981 SDRTLKLWNIKTGECLK 997
                 59*************96 PP

>> F-box_4  F-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0     2e-06    0.0052       3      41 ..     469     507 ..     467     541 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 2e-06
     F-box_4   3 dsLssLPlevlqhiaslLDsfsLsqLslvskllrevcss 41 
                 d L +LP+e+  +i+s+LD   L++ ++vsk+ r++  s
  KHJ34892.1 469 DFLAQLPFELSLQILSFLDHRDLCRSAQVSKQWRNIIDS 507
                 6799*******************************9765 PP

>> PALB2_WD40  Partner and localizer of BRCA2 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.11   2.9e+02     297     321 ..     737     765 ..     713     773 .. 0.74
   2 !    6.7   0.1    0.0012         3     186     217 ..     848     879 ..     842     893 .. 0.84
   3 ?   -0.7   0.0      0.21   5.3e+02     187     216 ..     891     920 ..     880     927 .. 0.83
   4 !    3.8   0.0    0.0087        22     165     219 ..     952    1002 ..     922    1009 .. 0.70

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.11
  PALB2_WD40 297 avltsG....aiavWdlllghctalllpe 321
                  vl sG    ++ vWd+ +g ct ++  +
  KHJ34892.1 737 NVLVSGstdrSVRVWDIEKGLCTQVFHGH 765
                 4666662222699*********9887655 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0012
  PALB2_WD40 186 veGekdallgttvlnniviWnlktGqllkkie 217
                 +   +d+l++ + +n + +W + tGq ++++ 
  KHJ34892.1 848 ISAHQDTLVSGSYDNTVRVWKISTGQTIHRLT 879
                 56789*********************998875 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.21
  PALB2_WD40 187 eGekdallgttvlnniviWnlktGqllkki 216
                 + ++d  ++ +++n + iW + tG  l ++
  KHJ34892.1 891 DHKRDRCISGSMDNFVKIWSIDTGACLFTL 920
                 5678999999999***********988766 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.0087
  PALB2_WD40  165 GrskekqtlmpPeetilafaeveGekdallgttvlnniviWnlktGqllkkieig 219 
                  G+ + k tl +   +i +f   +G+k   + +  +  + +Wn+ktG  lk + ++
  KHJ34892.1  952 GNGQCKSTLSAHTGAITCFQH-DGQK---VISGSDRTLKLWNIKTGECLKDLLVD 1002
                  555556666666666666643.5543...33445677889**********99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1067 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       727  (0.0405488); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.81u 0.29s 00:00:01.10 Elapsed: 00:00:00.47
# Mc/sec: 6883.00
//
Query:       KHJ34893.1  [L=435]
Description: putative alpha beta-hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.9e-36  126.0   0.0    1.2e-26   93.9   0.0    2.1  2  Abhydrolase_3    alpha/beta hydrolase fold
    1.4e-07   30.8   0.1    2.5e-07   30.0   0.1    1.3  1  COesterase       Carboxylesterase family
  ------ inclusion threshold ------
      0.052   12.5   0.1       0.12   11.3   0.1    1.6  1  Chlorophyllase2  Chlorophyllase enzyme
      0.064   11.9   0.1       0.37    9.4   0.0    1.9  2  AXE1             Acetyl xylan esterase (AXE1)
      0.076   12.5   0.0       0.12   11.8   0.0    1.2  1  Peptidase_S9     Prolyl oligopeptidase family
       0.18   11.4   0.0       0.57    9.8   0.0    1.7  2  Esterase         Putative esterase
       0.19   10.7   0.0       0.28   10.1   0.0    1.2  1  Chlorophyllase   Chlorophyllase


Domain annotation for each model (and alignments):
>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.9   0.0   4.7e-30   1.2e-26       1     109 [.      77     185 ..      77     219 .. 0.84
   2 !   30.2   0.0   1.5e-10   3.8e-07      98     209 ..     241     358 ..     225     360 .. 0.78

  Alignments for each domain:
  == domain 1  score: 93.9 bits;  conditional E-value: 4.7e-30
                    EEEE--STTTS--TTTTHHHHHHHHHHHTSEEEEEE---TTTS-TTHHHHHHHHHHHHHHHTHHHHTETTCEEEEEEETHHHHHHHHHHHHHHHTT CS
  Abhydrolase_3   1 lvyfHGGGfvlgsldthdalcrelakelgavvvsvdYrlAPehpfPaavedalaalrwlaeqawelgadpsrivlaGdSaGGnlaaavalrardeg 96 
                    ++ fHGGGf+lgs + + ++++ ++  ++a+ vsv+YrlAPe+pf   +ed+ +a+ +la++++el++dp+ri+l G SaGGn++ av l ++d +
     KHJ34893.1  77 VINFHGGGFTLGSGTDDARFAHAVVWGVNAIFVSVEYRLAPEYPFSVGIEDSADAVIYLAAHSEELRIDPQRIALSGFSAGGNITFAVPLLLHDLK 172
                    688***********************************************************99*****************************973 PP

                    ---EEEEEEESE..- CS
  Abhydrolase_3  97 epkvagqvliyP..v 109
                        ag  +i+P   
     KHJ34893.1 173 --IGAGKRIISPirT 185
                    ..3577777888432 PP

  == domain 2  score: 30.2 bits;  conditional E-value: 1.5e-10
                    --EEEEEEESE-SSTSSTTSHHHHHCHHTTTSSSSCHHHHHHHHHHHSS..GGGGGSTTTSGGGCS-..SST---..EEEEEETT-TTHHHHHHHH CS
  Abhydrolase_3  98 pkvagqvliyPvtdlertesesikkaeeladgplltraaldlfwrlylp..eadrddplaspllaed..lsglpp..tlvvvaefDplrdegeaya 187
                     ++ g++ +yP +d  r++++++ ++ +   +  l+r  +d f ++yl+  + d++dp++sp +++d  l+ + p  ++++++++D+l  eg a+ 
     KHJ34893.1 241 FTLLGLISFYPPVDY-RKSRKQRCDS-NPMPALNLPRILTDFFDQAYLQveDLDLADPYLSPAASSDanLKAAYPndIILYTCQYDMLNAEGVAFG 334
                    447789999**8877.6666666544.33454557899999999****75688888*******885455777655558999*************** PP

                    HHHHH..TT--EEEEEETTEETTG CS
  Abhydrolase_3 188 erlra..agvevelieyegmvHgf 209
                    +rl++   g+ v+   +eg++H+f
     KHJ34893.1 335 KRLASepIGKTVHGGIIEGVPHAF 358
                    ****8678***************9 PP

>> COesterase  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.1   9.6e-11   2.5e-07     100     198 ..      69     160 ..      57     181 .. 0.86

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 9.6e-11
                 STTSSEEEEEEE--STTTS-BGCG...S-THHHHHHHTSEEEEE----HHHHH-B-SSTTSBS-HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHH CS
  COesterase 100 eakkklPVlVwihGggfqtgsase...ydgsaLaaegnvivVtinYRlGvlGFlstgdeeapGNvGllDqvlALrWVkenIasFGGdpervtlfGesAG 195
                  +++++PV++ +hGggf+ gs+++   + + +     n i V+++YRl +         e p  vG+ D + A+ ++  + ++   dp+r+ l G sAG
  KHJ34893.1  69 PNDHRYPVVINFHGGGFTLGSGTDdarFAHAVVWGV-NAIFVSVEYRLAP---------EYPFSVGIEDSADAVIYLAAHSEELRIDPQRIALSGFSAG 157
                 456778****************88776888888888.***********86.........788889********************************** PP

                 HHH CS
  COesterase 196 aas 198
                 + +
  KHJ34893.1 158 GNI 160
                 976 PP

>> Chlorophyllase2  Chlorophyllase enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   4.7e-05      0.12      72     140 ..     134     197 ..      62     221 .. 0.64

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 4.7e-05
  Chlorophyllase2  72 WlakgLesvlpeevepdlsklalsgHSrGgktafalalgkaktslkfsa.ligvdPvag.askskqtepki 140
                      +la++      ee++ d +++alsg S+Gg++ fa+ l  ++  lk+ a    + P+    ++s+  + +i
       KHJ34893.1 134 YLAAH-----SEELRIDPQRIALSGFSAGGNITFAVPLLLHD--LKIGAgKRIISPIRTnDCTSSLSNTTI 197
                      44444.....357888999******************99999..444441234567665333444444455 PP

>> AXE1  Acetyl xylan esterase (AXE1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.12   3.1e+02      77     105 ..      70      96 ..      63     109 .. 0.72
   2 ?    9.4   0.0   0.00014      0.37     157     198 ..     130     171 ..     127     176 .. 0.81

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.12
                 S.SSSSEEEEEEEE-TT--GGGHHHHHHH CS
        AXE1  77 kekeeklPavvefhGYegsrgeihdllny 105
                 +  +++ P+v++fhG   + g+ +d   +
  KHJ34893.1  70 N--DHRYPVVINFHGGGFTLGSGTDDARF 96 
                 4..7899*******976665555555554 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00014
                 HHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH-SS- CS
        AXE1 157 DavrlveivaslpevDeeRvavlGasqGGalalavaalekri 198
                 Dav  + + ++   +D++R+a  G s GG ++ av  l +++
  KHJ34893.1 130 DAVIYLAAHSEELRIDPQRIALSGFSAGGNITFAVPLLLHDL 171
                 666666666677789*******************98776655 PP

>> Peptidase_S9  Prolyl oligopeptidase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.8e-05      0.12      45      81 ..     125     164 ..     122     170 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.8e-05
                   HHHHHHHHHHHHHTT...S--GGGEEEEEETHHHHHHHHH CS
  Peptidase_S9  45 fdDfiaaaealakeg...yvdserlaitGgSyGGyltgaa 81 
                   ++D  +a+ +la+++    +d++r+a+ G S+GG  t a+
    KHJ34893.1 125 IEDSADAVIYLAAHSeelRIDPQRIALSGFSAGGNITFAV 164
                   6777778888765544469***************998765 PP

>> Esterase  Putative esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00022      0.57       7      37 ..      54      86 ..      51     107 .. 0.86
   2 ?   -1.8   0.0      0.77     2e+03     109     128 ..     141     160 ..     139     168 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00022
                EEEEEEEE.CC....GGTTTEEEEEEE--TTHHC CS
    Esterase  7 eikvqvyLPedy...spgrkypvvylldGltgwd 37
                + +v +yLP +y   ++  +ypvv+ ++G  g++
  KHJ34893.1 54 SFEVVFYLPTSYfetPNDHRYPVVINFHG-GGFT 86
                67899*********98999**********.6654 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.77
                 HCSEECCCEEEEEETHHHHH CS
    Esterase 109 nfrtapdgravaGqSmGGlg 128
                 ++r++p++ a+ G+S GG +
  KHJ34893.1 141 ELRIDPQRIALSGFSAGGNI 160
                 567888989*********65 PP

>> Chlorophyllase  Chlorophyllase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00011      0.28      45     149 ..      73     175 ..      63     205 .. 0.72

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00011
  Chlorophyllase  45 typvvlflhG..tllsnkfyskllnhiashGfivva.Pqlykllp..PsaqdeidsaaevieWlseglkavlptsveanlsklalvGhsrGGkta 134
                      ypvv+ +hG  ++l   +    + h   +G   +     y+l+p  P   + i+++a+ + +l+ +      ++   + +++al+G s GG+ +
      KHJ34893.1  73 RYPVVINFHGggFTLGSGTDDARFAHAVVWGVNAIFvSVEYRLAPeyP-FSVGIEDSADAVIYLAAH-----SEELRIDPQRIALSGFSAGGNIT 161
                     689999998544778777777888888888865443033477777644.455666666665555433.....456778889************** PP

  Chlorophyllase 135 falalgysseltfsa 149
                     fa+ l    +l+++a
      KHJ34893.1 162 FAVPLLLH-DLKIGA 175
                     ***99765.677776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (435 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       228  (0.0127168); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.44
# Mc/sec: 2942.73
//
Query:       KHJ34894.1  [L=499]
Description: hypothetical protein EV44_g6461 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.042   13.7   0.0      0.042   13.7   0.0    2.7  3  RIFIN         Rifin
       0.14   12.7   0.0        0.4   11.2   0.0    1.8  1  EF-hand_like  Phosphoinositide-specific phospholipase C, efha
        3.7    8.5   0.0        3.7    8.5   0.0    3.4  3  EphA2_TM      Ephrin type-A receptor 2 transmembrane domain


Domain annotation for each model (and alignments):
>> RIFIN  Rifin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   1.4      0.28   1.7e+03     226     257 ..      95     127 ..      23     166 .. 0.51
   2 ?   -6.6  11.2         3   1.8e+04     241     265 ..     219     243 ..      98     291 .. 0.42
   3 ?   13.7   0.0   7.1e-06     0.042     236     308 ..     369     440 ..     314     443 .. 0.56

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.28
       RIFIN 226 sskekikkkvekivekaekkaaaaaa.eaaaea 257
                 +++++i ++++    +++++  a+a+ ++++++
  KHJ34894.1  95 KNEKSIGSEAKLSSPSVKDSVVANASdQKSSSE 127
                 111111111111111222211111111111111 PP

  == domain 2  score: -6.6 bits;  conditional E-value: 3
       RIFIN 241 kaekkaaaaaaeaaaeataeaekae 265
                  a+++++++++++++++ ++ ++++
  KHJ34894.1 219 GAKTNTENQKEKENNQKPDTSKEKN 243
                 1111111111111111111111111 PP

  == domain 3  score: 13.7 bits;  conditional E-value: 7.1e-06
       RIFIN 236 ekivekaekkaaaaaaeaaaeataeaekaetaaveattaslqtaiiasiv.aivvIvLimvIIYLiLRYrRKkK 308
                 ek+ +   ++ +a+a+++  ++  ++ +++ +  +++ a +  ++iasi  a++   +++ II L LRYrR  K
  KHJ34894.1 369 EKVEDVQSSSLTASAKASLGSEVPKISAKQSS-NDSSHADV-VKLIASIFgALLLLTIVVYIIRLCLRYRRIGK 440
                 22222222333333334444444444444333.23333333.4456666538888899999**********666 PP

>> EF-hand_like  Phosphoinositide-specific phospholipase C, efhand-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   6.7e-05       0.4      25      83 ..       5      65 ..       2      68 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 6.7e-05
  EF-hand_like 25 lslkelveFLreeQkeed..aseelalelIerYEpsetakkkkaltkdGFlmYLlskdgsi 83
                  l  ++++  Lr  Q e +  +++ + ++l+ r E  ++ +++++lt  G  m+L+ ++ s+
    KHJ34894.1  5 LESRNMKAVLRVIQDEVNrpNANMHKTRLVARSELADKPRSNSSLTLKGVAMFLTRRNKSL 65
                  5667888888888888761145567789**************************9988776 PP

>> EphA2_TM  Ephrin type-A receptor 2 transmembrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   1.0      0.51   3.1e+03      46      46 ..      89      89 ..      49     144 .. 0.50
   2 ?   -4.3   4.2         3   1.8e+04      41      41 ..     239     239 ..     187     282 .. 0.64
   3 ?    8.5   0.0   0.00061       3.7       3      36 ..     412     445 ..     411     495 .. 0.61

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.51
    EphA2_TM 46 e 46
                +
  KHJ34894.1 89 Q 89
                1 PP

  == domain 2  score: -4.3 bits;  conditional E-value: 3
    EphA2_TM  41 e 41 
                 +
  KHJ34894.1 239 S 239
                 1 PP

  == domain 3  score: 8.5 bits;  conditional E-value: 0.00061
    EphA2_TM   3 aaavaglvllvilvilvlvlvrrrsknrkqksdl 36 
                 +a+++g++ll+++v+ ++ l+ r ++  k++s +
  KHJ34894.1 412 IASIFGALLLLTIVVYIIRLCLRYRRIGKAESPP 445
                 5667777777777777777776777666666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1811  (0.10101); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                       107  (0.00596798); expected 17.9 (0.001)
Passed Fwd filter:                        48  (0.00267723); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.39u 0.40s 00:00:01.79 Elapsed: 00:00:00.58
# Mc/sec: 2591.17
//
Query:       KHJ34895.1  [L=692]
Description: putative meiosis specific protein hop1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-27   96.2   0.0    5.5e-27   94.7   0.0    1.8  1  HORMA     HORMA domain
     0.0017   18.2   0.0     0.0036   17.1   0.0    1.5  1  MarR_2    MarR family


Domain annotation for each model (and alignments):
>> HORMA  HORMA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.7   0.0   6.1e-31   5.5e-27       1     189 [.      27     234 ..      27     255 .. 0.84

  Alignments for each domain:
  == domain 1  score: 94.7 bits;  conditional E-value: 6.1e-31
       HORMA   1 SlelvkellaasissilylRglfpedaFedrkl..........................sgl.klkiLlrgsseeadrlldwLekGvfdaLekkyLeal 72 
                 S el+k++++a is +l+ R +fp+  ++ r++                          ++l  +kiL r++++ +d++ld+Le G  daLe++yLe+l
  KHJ34895.1  27 SFELMKTVITATISHVLWARRVFPDITYNLRSYdpadpevsydafvkgikgtttsfdasENLmIWKILPRSQDPAVDKVLDCLEIGAADALERGYLEKL 125
                 789*******************************************************955636777877888************************** PP

       HORMA  73 iltIy.kdkdep..envlEsYtFsfkytksggkedvssskletkkknleslsldekeeekkktekevkkelealirrlitltqsLpplpekryltmkLl 168
                 +++++ +d++    +n++EsYt+ f+y ++++   ++ss     + nl+s+ +    ++ k+      + +  li       ++ ++lp++  + + L 
  KHJ34895.1 126 QVSLHvADENLItdSNLIESYTMIFEYDENQNL--RISS-----ELNLNSIVI----RSAKQDLYGLVNDVGFLIHHNNRHRSNGSELPDEFRMLLSLK 213
                 *****88888665479***********663332..3333.....334556554....44555666667777777777778888999************* PP

       HORMA 169 ytddtPedyePpgFkaaaeee 189
                 y+ ++P dy+Pp+F++++ ++
  KHJ34895.1 214 YNMNAPIDYQPPMFRPGDRNT 234
                 ****************99887 PP

>> MarR_2  MarR family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0     4e-07    0.0036       8      60 ..     450     499 ..     447     502 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 4e-07
                 HHHHHHHHCTTTSEE.EHHHHHHHHTSSHHHHHHHHHHHHHTTSEEEEESSSSS CS
      MarR_2   8 arvLaaLgrrpgrdl.tvgelarrlglsksavsrilkrLvaaGLverrpgpeDk 60 
                 +r+L++L++ +   l + +ela  l+++k +++r+l ++ + GL+  ++   Dk
  KHJ34895.1 450 RRALHYLRDKGT--LsSCSELAPQLNIPKYRITRLLGEFKSYGLLKGSRK--DK 499
                 89*********9..89****************************988765..55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (692 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       533  (0.0297284); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.41
# Mc/sec: 5101.75
//
Query:       KHJ34896.1  [L=402]
Description: hypothetical protein EV44_g4724 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2060  (0.114898); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 2921.21
//
Query:       KHJ34897.1  [L=717]
Description: putative telomere-binding alpha subunit central domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.4e-35  120.5   0.3    1.4e-34  119.2   0.3    1.8  1  POT1PC        ssDNA-binding domain of telomere protection pro
    2.5e-12   46.9   0.2    2.3e-11   43.7   0.0    2.5  2  POT1          Telomeric single stranded DNA binding POT1/CDC1
  ------ inclusion threshold ------
      0.021   14.9   2.2      0.058   13.5   2.2    1.7  1  Eapp_C        E2F-associated phosphoprotein
      0.057   13.5   4.1      0.069   13.2   0.5    2.8  3  Dynein_heavy  Dynein heavy chain region D6 P-loop domain
       0.47   10.9   2.4       0.94    9.9   0.8    2.2  2  PolyA_pol     Poly A polymerase head domain
          4    7.7  12.1       0.31   11.3   6.2    2.0  2  DUF4050       Protein of unknown function (DUF4050)


Domain annotation for each model (and alignments):
>> POT1PC  ssDNA-binding domain of telomere protection protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.2   0.3   4.8e-38   1.4e-34       2     154 ..     194     354 ..     193     355 .. 0.90

  Alignments for each domain:
  == domain 1  score: 119.2 bits;  conditional E-value: 4.8e-38
                 GGG--SSSEEEEEEEEEEEE-..SS-EEEEEE-S---TTS--B-TTTSST......................T--S-SBS-EEEEEE-HHHHHHHTTT- CS
      POT1PC   2 lkdvqegeffDligqvvkkasddsgkvvLyvwDgtenpnlfskvdpeesalegdee.dvkgYetksdk....kwigpfgkltlqitlydehaefarenl 95 
                 ++d++ ++f+++ig+v k+++  ++++++y++D+t+n+ lf++++ ++     d++ d+++Y++   k    + +gp+gkl+lqit++de a+f++e++
  KHJ34897.1 194 VQDMKANSFYNIIGEVRKIWQSSDQRASVYLSDYTSNSLLFDYTIADDPPDFFDQDgDEFNYTNALMKrnksQIPGPYGKLILQITVWDEDAAFIKEHV 292
                 6899***************************************99887766666666********999999**************************** PP

                 -TT-EEEEEEEEEEE-TTS.-EEEEE-SSTTGCS--EEEEE.......TTSGGGHHHHHHHHHHHH CS
      POT1PC  96 kpgdfvrLrNvhiklgrkgsklegflhggrkygrgikvlpl.......endprlkellrrkreyek 154
                 k+g++++++N++ikl+ k+ +leg++hg+      ++++         e ++ lk +++rk+++++
  KHJ34897.1 293 KCGNWIYIKNIRIKLSLKN-HLEGVVHGEEGK---VHIQNFqiwncpiEINKLLKAAQQRKKAWWN 354
                 *****************99.*******88874...4444433344555**************9996 PP

>> POT1  Telomeric single stranded DNA binding POT1/CDC13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.7   0.0   7.8e-15   2.3e-11      10      97 ..      24     108 ..      16     166 .. 0.77
   2 ?   -0.3   0.1      0.29   8.7e+02     113     141 ..     223     262 ..     183     264 .. 0.62

  Alignments for each domain:
  == domain 1  score: 43.7 bits;  conditional E-value: 7.8e-15
                 TTEEEEEEEEEEEEEECCCSCCEEEEECCCCCTTTSCCHCTTTEEEEEEEECCCCCCCCGGCCCCEEECCCCEEEESTTSCECCSEEE CS
        POT1  10 ekkvvnviGvVidasfpkktggsdyvctfkivDpsknkgdendglrvvlFsknfedLpivkkvgdiirlhraklqsyngepqglanig 97 
                 ++   nviG + d+++p++t g++++ct+ ivD+s    ++n gl +++F ++ + +p+    gd+i +++ak q++ g    la++ 
  KHJ34897.1  24 HGHLCNVIGFISDFRPPYRTQGTSWKCTIDIVDHS--IRENNVGLPLNVFWTEAR-MPSAPIFGDVIIVSQAKTQTHGGYLSLLASNN 108
                 66778******************************..***************966.899999***************99655555444 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.29
                 E...........CCCCCSTSTTCCCCSHCCHHHHHHHHHH CS
        POT1 113 l...........letppilsskffelskeekkylkdlrkw 141
                 +           ++t     ++ff ++ +e  y ++l k+
  KHJ34897.1 223 YlsdytsnsllfDYTIADDPPDFFDQDGDEFNYTNALMKR 262
                 1233333333447888888888888888888888888775 PP

>> Eapp_C  E2F-associated phosphoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   2.2   1.9e-05     0.058       8     126 ..     282     418 ..     278     444 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.9e-05
      Eapp_C   8 dedekwvkkkrrsyk.......................akakkkkksdavLsCpaCfttvcldc.qrHekyknqYramfvlnvkvdkeevlkykeaese 82 
                 ded +++k++ + ++                       ++ k + +   + +Cp  ++++   + qr + + n Y   +v   k +++e+l++k++ + 
  KHJ34897.1 282 DEDAAFIKEHVKCGNwiyikniriklslknhlegvvhgEEGKVHIQNFQIWNCPIEINKLLKAAqQRKKAWWNSYEENLVKERKKQSAEILQSKRKIDG 380
                 5677777777777667777777777777777777777655556666678999**99998876651677889*********************9976655 PP

      Eapp_C  83 kkkkkkkkskkkeekeeeaeaeeaeeeeeeeeeeeesyhpvkCs 126
                 +++ +++k+k+ +++++e++a+ +e+       +++ +++  C 
  KHJ34897.1 381 ENQISSSKNKNGKQRRKEKKAQAEENA------ARRDAKAAACL 418
                 555444444443333333333222222......23334444444 PP

>> Dynein_heavy  Dynein heavy chain region D6 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.5   2.3e-05     0.069      46      91 ..     286     332 ..     277     381 .. 0.90
   2 ?   -3.7   0.0       4.2   1.3e+04      46      67 ..     422     443 ..     419     447 .. 0.80
   3 ?   -0.5   0.1      0.41   1.2e+03      43      96 ..     487     536 ..     477     545 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.3e-05
                   HHHHHHHHHT-EEEEE-GGG-CCCHHHHHHH.......HH.TT-EEE CS
  Dynein_heavy  46 kalekaakegsWvlLqNchlapswlkeLekileeleeklh.ssfRlw 91 
                   + +++ +k g+W++++N+   +s  ++Le +++  e k+h ++f++w
    KHJ34897.1 286 AFIKEHVKCGNWIYIKNIRIKLSLKNHLEGVVHGEEGKVHiQNFQIW 332
                   5789999*************************977777773599999 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 4.2
                   HHHHHHHHHT-EEEEE-GGG-C CS
  Dynein_heavy  46 kalekaakegsWvlLqNchlap 67 
                   + ++ +++++s v L+N+ l+ 
    KHJ34897.1 422 ENIQASHEDQSIVPLRNVLLSS 443
                   6788899999999999998875 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.41
                   HHHHHHHHHHHHT-EEEEE-GGG-CCCHHHHHHH.......HHTT-EEEEEEES CS
  Dynein_heavy  43 eaekalekaakegsWvlLqNchlapswlkeLekileeleeklhssfRlwltsep 96 
                   e++  ++k+  +++ + ++N + + ++  +Le+  +   +k++++ R+w+  + 
    KHJ34897.1 487 EIDGSIDKSELDDNSISVKNKWEW-RFSLHLEDASN---TKIQNKERVWVIVDN 536
                   666677778888888888888888.88889999865...788999999987665 PP

>> PolyA_pol  Poly A polymerase head domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.98   2.9e+03      52      82 ..     159     189 ..     139     240 .. 0.56
   2 ?    9.9   0.8   0.00031      0.94      28      99 ..     345     415 ..     332     427 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.98
                 CCCEECCEEEEECCEECEEEEEE---SSHHH CS
   PolyA_pol  52 iavlekkqllevatfRlekdesdarnpesek 82 
                 i +  +++++   t+R+ +d ++  ++++++
  KHJ34897.1 159 ISMNNHRNEIVALTMRSGFDSNKILSKKKKE 189
                 4444444555555555555554443333222 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00031
                 HHHHHHHHHHHHT-EEEEETTTTCCCCEECCEEEEECCEECEEEEEE---SSHHH...HHHHHHCTSSBGGG CS
   PolyA_pol  28 peelakllrkkvkeallsgeefqtiavlekkqllevatfRlekdesdarnpesekstesleeDlkrRDftiN 99 
                 +++ +k+  ++++e+l ++++ q +++l++k++++     ++++ ++ +++++ek  +++ee ++rRD    
  KHJ34897.1 345 AQQRKKAWWNSYEENLVKERKKQSAEILQSKRKIDGENQISSSKNKNGKQRRKEKK-AQAEENAARRDAKAA 415
                 566777888999999999***************99888777777777777766665.79*********8665 PP

>> DUF4050  Protein of unknown function (DUF4050)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   6.2   0.00011      0.31      37     132 ..     337     443 ..     328     446 .. 0.61
   2 ?   -2.1   0.3       1.3     4e+03      83      96 ..     606     641 ..     572     675 .. 0.47

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00011
     DUF4050  37 kwNeGlalWearRdaWtgartvrkkekkerep....seaesasseesssssealeeqsaessssssasatattspas.............seeseeees 118
                 ++N+ l+  ++r +aW  + +++ ++++++++    +      s+++   +++++++++++ ++  ++++a++++++             +e+ + +++
  KHJ34897.1 337 EINKLLKAAQQRKKAWWNSYEENLVKERKKQSaeilQ------SKRKIDGENQISSSKNKNGKQRRKEKKAQAEENAarrdakaaaclklNENIQASHE 429
                 67777888899******99998888777766633331......33333333222222222222222222222222222333457899999999999*** PP

     DUF4050 119 vetlvPvappllpp 132
                 ++ +vP+ + ll++
  KHJ34897.1 430 DQSIVPLRNVLLSS 443
                 ********999985 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.3
     DUF4050  83 s......................ealeeqsaessss 96 
                                         +++++sa+ +++
  KHJ34897.1 606 RnmnvgtqpdvdtdnemansnypLNINTSSAHMKQR 641
                 133333333332222222222232222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (717 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1582  (0.0882369); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.68u 0.30s 00:00:00.98 Elapsed: 00:00:00.45
# Mc/sec: 4760.27
//
Query:       KHJ34898.1  [L=748]
Description: putative xpg domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-69  233.6   0.0    5.3e-69  232.1   0.0    1.7  2  MKT1_C    Temperature dependent protein affecting M2 dsRNA re
    3.2e-28   97.9   0.0    9.9e-28   96.3   0.0    1.9  1  MKT1_N    Temperature dependent protein affecting M2 dsRNA re
  ------ inclusion threshold ------
       0.15   12.6   0.0       0.43   11.1   0.0    1.7  1  XPG_N     XPG N-terminal domain


Domain annotation for each model (and alignments):
>> MKT1_C  Temperature dependent protein affecting M2 dsRNA replication
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.26   1.6e+03     139     168 ..      18      47 ..      11      54 .. 0.80
   2 !  232.1   0.0   8.9e-73   5.3e-69       1     239 [.     501     745 ..     501     746 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.26
      MKT1_C 139 lelsssLPffldtntglGivvktyldellk 168
                 ++   s P  +  n++ G+ +  yl+ ++ 
  KHJ34898.1  18 TPTYASTPLSELKNAVIGVEATAYLQNMID 47 
                 5566788999999************99875 PP

  == domain 2  score: 232.1 bits;  conditional E-value: 8.9e-73
      MKT1_C   1 RfLelrgyvdekheltkwGkaLakalkelk..........eleealllaleLlrlgvLtgdenekpeysgapslgseeekksilLisRvasLlplrlkp 89 
                 RfL+lr+yvd+ helt+wGkaLa +lk ++          + eea++la+e++r+g L+++ n++pe  g++ +gsee+k+s++L+ R a+Ll+lr+++
  KHJ34898.1 501 RFLHLRDYVDDLHELTAWGKALAVTLKLVQpiirkyddihHIEEAAFLAFEMIRFGHLNSR-NRHPELIGGALRGSEEDKASCMLVGRTACLLKLRHQN 598
                 9**************************************9999******************.************************************* PP

      MKT1_C  90 igytgplsrdllaFrslvkllrrslreliEavlvslllsgeanr.erddwlelsssLPffldtntglGivvktyldellkeeekstsgeakedalell. 186
                  gytgpls++ laF sl+k+++++ r+++Ea++vs++ls++++r er+d+ ++ +sLP  ++tnt++Gi+v tyld+++k    + +++++e+++  + 
  KHJ34898.1 599 LGYTGPLSKNYLAFISLIKTIQEADRDILEAAVVSMFLSNQISReERHDCGDIGRSLPLSHSTNTIFGIAVTTYLDDFIK---LNWTKAEREENKPVFa 694
                 ********************************************5555*****************************998...5788888888888885 PP

      MKT1_C 187 kkvfpnvedlkedlerafefwdavyalvkelseekliskellkefekadewle 239
                 kk++p++++l edl +afef+davy+++k+l e  ++   ++++++ka ++l+
  KHJ34898.1 695 KKFIPHSTKLVEDLTVAFEFFDAVYEGIKSLRE--EMPIVEKEAWHKAYKYLN 745
                 7777***************************97..99************9985 PP

>> MKT1_N  Temperature dependent protein affecting M2 dsRNA replication
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.3   0.0   1.7e-31   9.9e-28       2      90 .]     330     418 ..     329     418 .. 0.99

  Alignments for each domain:
  == domain 1  score: 96.3 bits;  conditional E-value: 1.7e-31
      MKT1_N   2 nDlheylgqrLPeelyyylsrGligprilnaltsgelieeppldggdseeYrklvtdllteireqalnLltqrlhrfyqakdvkvkvwf 90 
                 +D+++ylg+rLP+elyyylsr+l+gpriln ++s e i  p+ldg++seeY++l+t++  +++e+a +L+++r+hr++q+k+v++++wf
  KHJ34898.1 330 SDNNDYLGLRLPPELYYYLSRALVGPRILNYFVSLESIIFPTLDGIVSEEYKRLITKTIIPLKETAAALVASRIHRAFQNKSVSIRFWF 418
                 79**************************************************************************************9 PP

>> XPG_N  XPG N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   7.1e-05      0.43      22      95 ..      27     104 ..      19     108 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.1e-05
                 GGGTTEEEEEEHHHHHHHHHHH..SE.ETTEE-BS..-HHHHHHHHHHHHHHHTTEEEEEEE--S--GGGHHHHHHHH CS
       XPG_N  22 ealegkklaiDaslwlyrflia..vreqlgnalen..tshlmglfsrllrlldfgikPifVFdgkapdlkkeelekrs 95 
                  +l++ ++++ a ++l+ ++ +    e+l  al +    ++  l+ +l +  d++  P+fVFdg+ +  k e   k s
  KHJ34898.1  27 SELKNAVIGVEATAYLQNMIDSgpAHEPLLAALGGdpIGLKYHLELELDKWSDNNLVPLFVFDGQSIVGKDEMTLKSS 104
                 56677777777777777777653234455666666443345555667777889**************99998877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (748 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 5057.16
//
Query:       KHJ34899.1  [L=213]
Description: putative rhomboid family membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       784  (0.043728); expected 358.6 (0.02)
Passed bias filter:                      306  (0.0170673); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.27s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1559.17
//
Query:       KHJ34900.1  [L=531]
Description: putative cation transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.7e-83  279.1   7.6    1.1e-82  278.1   3.4    2.0  2  TrkH             Cation transport protein
  ------ inclusion threshold ------
       0.09   12.6   0.0        3.5    7.4   0.0    2.2  2  Selenoprotein_S  Selenoprotein S (SelS)


Domain annotation for each model (and alignments):
>> TrkH  Cation transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.8   0.1    0.0035        31     326     363 ..       6      40 ..       2      81 .. 0.63
   2 !  278.1   3.4   1.2e-86   1.1e-82     118     497 ..     117     509 ..     114     513 .. 0.95

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.0035
        TrkH 326 trtaGFsvvdlsnlhpaikvllvlmmyigglpgStagg 363
                 +  aG+++vd+s l  + + l v+ ++ig  +   +++
  KHJ34900.1   6 MTQAGLNTVDMSDLNLFQQCLTVVLSMIGNPI---VVS 40 
                 55678888888888888888888888887533...333 PP

  == domain 2  score: 278.1 bits;  conditional E-value: 1.2e-86
        TrkH 118 lgrgsaflylseaqkeelggkelrslselikilvvyyvgleilafvllvvliytakaysevvdstgvsplwwaffhsmSafnnlGfsltpnSlasfnkn 216
                 ++r+  f  ls++++e ++ +e+r++++l  +++ yy++++  + ++l   iy++  y+e + ++g +p w ++  ++ afnn G+sl++ S  +f+  
  KHJ34900.1 117 VDRNAQFHSLSLEEREYVQCVEYRAVKLLGYMITAYYFIWQFFGCLVL--GIYLSLNYTEEISREGFNPWWLGASLAIGAFNNSGISLLDTSVIPFRDS 213
                 78999*************************************999888..************************************************* PP

        TrkH 217 ivillvaiifiilGnigFpillrviiaikkkilrdl...kqikeslsflldlprrcftLllasgfvwllllelavlnvtdnilfilldegslvvksipk 312
                  ++ll +++++++Gn++Fpi+lr i+      ++d    ++++e l f+l+ prr+ t l+ s  +w ll  l+  n+ d++ f + ++ s  ++ +p 
  KHJ34900.1 214 SFVLLNMSLLMLAGNTAFPIFLRWILSQILNLIPDNekcEDLRETLRFILKFPRRVYTNLFSSDQTWCLLALLIFFNAFDWTAFEVFNLYSPDLQTMPT 312
                 *******************************99998777899********************************************************* PP

        TrkH 313 gsrvlkalFqsvstrtaGFsvvdlsnlhpaikvllvlmmyigglpgStaggIrrtnvyeefslgkyeieqekepkav.............skksidgkh 398
                     +++lFq vs+r+ GF v+++s+l    + l++lmmyi++ p  +++ +r+ nvyee+slg+y+ e  + +  +              +  ++ ++
  KHJ34900.1 313 KPILIDGLFQTVSMRSSGFIVIPISSLFIGLQTLYILMMYISAFP--ITITMRSSNVYEERSLGIYAQELYSSDLPIndestsglpirrrDRFYFVQEQ 409
                 *********************************************..*******************655555544445569*******9888899**** PP

        TrkH 399 lerqllvdlwslflvlliilileglklsdvqepdfsffdiLfevvSaygtvGLSlG.a.knaslsaqlttisklvlialmirGrlrglpvlldraillp 495
                 ++rql++dlw+l+++ + i+  e+   +   +  fs+f ++fe+vSayg vG S+G + k+ s+s    ++s l+l+a+m+rGr+rglpv +d ai+lp
  KHJ34900.1 410 VRRQLSHDLWFLVIGAVMIISTESSNFNRDPQ-TFSIFNMIFEIVSAYGCVGFSVGlPdKTYSFSGAWHKLSRLILCAIMLRGRHRGLPVDIDKAIQLP 507
                 ***********************999886654.7****************************************************************9 PP

        TrkH 496 sd 497
                  +
  KHJ34900.1 508 GQ 509
                 65 PP

>> Selenoprotein_S  Selenoprotein S (SelS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.0   0.00039       3.5      18      72 ..      15      69 ..       6      88 .. 0.83
   2 ?    2.7   0.0     0.011        97      19      47 ..     400     428 ..     388     438 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00039
  Selenoprotein_S 18 eaeglrflqetvgallskyGWylllgivllllliqklrkrlralrqresdksaaa 72
                     +  +l+  q++ +++ls  G  ++++i+++l+  + ++k l++ r++e++++ ++
       KHJ34900.1 15 DMSDLNLFQQCLTVVLSMIGNPIVVSIIVVLVRKRAFEKGLKKRRKEEKKRDHTS 69
                     56789999*********************99999999998887777777766655 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.011
  Selenoprotein_S  19 aeglrflqetvgallskyGWylllgivll 47 
                       + + f+qe v   ls+  W+l++g v++
       KHJ34900.1 400 RDRFYFVQEQVRRQLSHDLWFLVIGAVMI 428
                      567889*******************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (531 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       884  (0.0493056); expected 358.6 (0.02)
Passed bias filter:                      578  (0.0322383); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.25s 00:00:00.86 Elapsed: 00:00:00.42
# Mc/sec: 3771.32
//
Query:       KHJ34901.1  [L=109]
Description: putative cytochrome c [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-09   37.9   0.0    3.9e-09   37.5   0.0    1.2  1  Cytochrom_C      Cytochrome c
    7.8e-08   32.5   0.1    2.6e-07   30.9   0.1    1.7  1  Cytochrome_CBB3  Cytochrome C oxidase, cbb3-type, subunit III
  ------ inclusion threshold ------
      0.021   14.5   0.5      0.079   12.7   0.5    1.9  1  Cytochrom_C550   Cytochrome c-550 domain


Domain annotation for each model (and alignments):
>> Cytochrom_C  Cytochrome c
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.5   0.0   6.5e-13   3.9e-09       2      90 ..       9     105 ..       8     107 .. 0.81

  Alignments for each domain:
  == domain 1  score: 37.5 bits;  conditional E-value: 6.5e-13
                  --HHHHHHTTGGGTB-SSSBSSS....--HHHHHHHTTT-HHHHHHHHTTSS--S..........SSHHHHHHHGGGGGGG.TT--HHHHHHHHHHHH CS
  Cytochrom_C   2 arGkelftanCaaCHgvegggakqgggptlsgaaerasaasigasvanpaavsap..........rddfekkkltaemparkerlteqeiadlaaYLk 89 
                  ++G+ lf++ Ca+CH +++   k+  gp l g+  r++++ +g s+++ ++++              +++k+ ++++m       +e++++dl+ +Lk
   KHJ34901.1   9 KKGAGLFKQRCASCHNLKEDDSKKV-GPSLIGLFGRKTGSVEGYSYSDANKAKGIiwneetlftyLENPKKYIPGTKMAYG-GLKKEKDRNDLITFLK 104
                  69*****99**********999988.9********************9999999955666666655555555555555443.66778**********8 PP

                  T CS
  Cytochrom_C  90 s 90 
                  +
   KHJ34901.1 105 K 105
                  5 PP

>> Cytochrome_CBB3  Cytochrome C oxidase, cbb3-type, subunit III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   0.1   4.3e-11   2.6e-07       2      67 .]       7     103 ..       6     103 .. 0.72

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 4.3e-11
  Cytochrome_CBB3   2 aaaaGaalykknCasCHg.....kggag..............pslagrdwep................dalvdiiknGkgaMp....afggqls 56 
                      ++++Ga l+k+ CasCH      ++++g                                        ++l+++++n k+  p    a+gg  +
       KHJ34901.1   7 DYKKGAGLFKQRCASCHNlkeddSKKVGpsliglfgrktgsvE--------GysysdankakgiiwneETLFTYLENPKKYIPgtkmAYGGLKK 92 
                      789**************98776655778444444444444440........04444455555666666**********9877777679999999 PP

  Cytochrome_CBB3  57 deelwalvaYl 67 
                      ++++++l+++l
       KHJ34901.1  93 EKDRNDLITFL 103
                      *******9997 PP

>> Cytochrom_C550  Cytochrome c-550 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.5   1.3e-05     0.079      21      42 ..       3      24 ..       1      97 [. 0.86

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1.3e-05
                    EEHHHHHHHHHHHHHHTHHHHG CS
  Cytochrom_C550 21 lseeqlkkgkklFeaeCaqCHv 42
                    + e ++kkg  lF++ Ca+CH 
      KHJ34901.1  3 FKEGDYKKGAGLFKQRCASCHN 24
                    567799***************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 811.71
//
Query:       KHJ34902.1  [L=238]
Description: putative n-6 adenine-specific dna methyltransferase 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.1e-50  170.7   0.5    2.5e-50  170.4   0.5    1.1  1  N6-adenineMlase  Probable N6-adenine methyltransferase
  ------ inclusion threshold ------
       0.11   12.1   0.0       0.18   11.5   0.0    1.4  1  UPF0020          Putative RNA methylase family UPF0020


Domain annotation for each model (and alignments):
>> N6-adenineMlase  Probable N6-adenine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.4   0.5   2.8e-54   2.5e-50       1     160 []      47     231 ..      47     231 .. 0.96

  Alignments for each domain:
  == domain 1  score: 170.4 bits;  conditional E-value: 2.8e-54
  N6-adenineMlase   1 edwqlsQfwysdetaealakellee.eeskkiaclsaPsvyealkkek........kkekvlLleiDkrFealygeekfvfYdlnnpeelpeel 85 
                      e+wq sQfwy++eta++la+++l++ ++ ++ia++saPs y+  kk          +  k++Lle+D+rF +++++e fvfYd++np +lp+el
       KHJ34902.1  47 ENWQYSQFWYDEETARKLATAVLSNaSKGETIAMISAPSAYVMAKKLLiesgrpqtSWPKIILLEFDRRF-KIFKDE-FVFYDFKNPMQLPSEL 138
                      89**********************999999************999999999**998789***********.888887.**************** PP

  N6-adenineMlase  86 kgkfdviviDPPFlseeclkklaktaklllk.............klilctgevmee.lekll...gvkktkfepehen.klsnefrlYanfel 160
                      kg+++ i++DPPFls++c++k+a  +k+l+k             +l++ctge+me+ ++kl+   g+ +t+fep+h++ +lsnef ++anfe+
       KHJ34902.1 139 KGSINHIICDPPFLSDDCQTKVAISVKWLSKsweimpesraeesRLVICTGERMEKtIQKLYqkrGIFRTNFEPTHTKqQLSNEFLCFANFEC 231
                      ******************************************999***********9888887777889*******9889***********97 PP

>> UPF0020  Putative RNA methylase family UPF0020
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     2e-05      0.18     106     181 ..     125     205 ..     117     221 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 2e-05
                 EEEE--GGG--.STTS---EEEE------.----HHHH.HHHHHHHHHHHHHH-TT..-EEEEEESS..HHHHHCC---ES CS
     UPF0020 106 efsqadaakLr.lkegevdvivtnpPYGe.rlgskkal.ekLYseflrelkrvlrgggrlvlltsen..kalekaleeral 181
                  +  ++  +L+ + +g+++ i+++pP+     ++k a+  k  s+  + + +  ++++rlv+ t e+  k+++k++++r +
  KHJ34902.1 125 FYDFKNPMQLPsELKGSINHIICDPPFLSdDCQTKVAIsVKWLSKSWEIMPESRAEESRLVICTGERmeKTIQKLYQKRGI 205
                 5555666789989999***********862577788877788889999999999999999999987511456666666654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       520  (0.0290033); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1861.24
//
Query:       KHJ34903.1  [L=783]
Description: putative aconitate hydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   6.2e-148  493.6   0.0   7.7e-148  493.3   0.0    1.1  1  Aconitase    Aconitase family (aconitate hydratase)
    1.8e-43  148.0   0.0      3e-43  147.3   0.0    1.4  1  Aconitase_C  Aconitase C-terminal domain


Domain annotation for each model (and alignments):
>> Aconitase  Aconitase family (aconitate hydratase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  493.3   0.0  8.5e-152  7.7e-148       1     461 []      71     507 ..      71     507 .. 0.93

  Alignments for each domain:
  == domain 1  score: 493.3 bits;  conditional E-value: 8.5e-152
   Aconitase   1 ekiwdahlv....ee..egiayv...pdrvllqdvtgvqalvdlaaareavrrlggtlatidhlvpvdlvidhsvgaeealeknledefernkeryefL 90 
                 eki+++hl     +e  +g++y+   p+rv++qdvt+++a+ ++++a+ +             + p+++++dh++ a+++ ek+l ++ + nke+++fL
  KHJ34903.1  71 EKIIYSHLDdphgQEieRGVSYLklrPERVACQDVTAQMAILQFMSAGMPS-----------VANPTTVHCDHLIVAQSGGEKDLVTAENVNKEVFDFL 158
                 79999999955442265668888889***********************99...........999********************************** PP

   Aconitase  91 ksaakafgirvvppgqGIvHqvnlEyglalpgktvvgtDSHTtmigglGvlaiGvGgieaeavllgqplelkipkvvgvkltGklkegvtakDlvlavi 189
                 +s +++++i ++ pg+GI+Hq+ lE+ +a+pg +++gtDSHT+++gglG+ aiGvGg++a++v+++ p+elk+pkv+g+kltG+l+ ++++kD++l+v+
  KHJ34903.1 159 SSSCAKYNIGFWRPGSGIIHQILLEN-YAFPGGLLIGTDSHTPNAGGLGMCAIGVGGADAVDVMANLPWELKAPKVIGIKLTGQLSGWTSPKDVILKVA 256
                 **************************.************************************************************************ PP

   Aconitase 190 gklrkkgvvgkvvEffGegvesLsledraTiaNMaaEvGAttglfpvdektleYLkatgreeaavlveaydkaqalfelaadedaeydkvleldlstle 288
                 ++l++kg++g++vE+fG+gve++s++++ Ti+NM+aE+GAtt++fp++++++eYL+at+r+e     + y+k     el+ade+aeyd+ +e++ls+le
  KHJ34903.1 257 DILTVKGGTGAIVEYFGPGVETISATGMGTICNMGAEIGATTSVFPFNDRMYEYLAATNRSEIGDFSRIYAK-----ELRADENAEYDQFIEINLSELE 350
                 ************************************************************887733333444.....688******************* PP

   Aconitase 289 psvagpkrPqdavplselvkkefkeelekeaaekaleyklkegtklkdgkvdiaaigSCTNssnedvraaagllakavekglkvkpgvktsvaPGSevv 387
                 p+++gp++P+ a+p+s++      +++            +k++++ +   +++++igSCTNss+ed+++aa++++ a ++g k+k+   ++v+PGSe++
  KHJ34903.1 351 PHINGPFTPDLATPISKFS-----DAV------------KKNNWPED---LKVGLIGSCTNSSYEDMSRAASVARSALDHGIKAKA--LFTVTPGSEQI 427
                 ***************5554.....666............7889**99...*******************************99998..*********** PP

   Aconitase 388 kayleaeGlleiLekaGfevvgagCstCignsdrle..ege..aivsssNRNFegRq..gpntrayLaSPelvvaaAlaG 461
                 +a++e++G l+++e+ G  v++++C++Cig++dr +  +g   +i+ss+NRNF gR+  +p t+ ++aSPelvva+ + G
  KHJ34903.1 428 RATIERDGQLQTFEEFGGMVLANACGPCIGQWDRRDvqKGTpnSIISSYNRNFTGRNdaNPATHSFVASPELVVAMTIGG 507
                 **********************************775533366**************66688888***********9976 PP

>> Aconitase_C  Aconitase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.3   0.0   3.4e-47     3e-43       2     129 ..     587     714 ..     586     716 .. 0.98

  Alignments for each domain:
  == domain 1  score: 147.3 bits;  conditional E-value: 3.4e-47
                  CCCCCCTT--CHHHHSTGGGCCGHCCHHHCCCGGTTTCCCCTTTSBBSEEEETTTTEEEEHHHHHHHHHHTT--EEEE--SSBTBS---THHHHHHHH CS
  Aconitase_C   2 ekllklkGlttedeksnvdtdlkipkqfegtianiglgnelveekrankttdlddgekedvvdaaerykkegaklvviagknfGeGSSRehAAkalrl 99 
                  ++llk+kG+tt+d++s+++++lk++++++++++n+ +g+ +  + ++nk++++ +ge  +v+ +a++ykk g+++vvi++ n+GeGSSRehAA+++r+
   KHJ34903.1 587 PILLKAKGKTTTDHISMAGPWLKYRGHLDNISNNMLIGAVNEMNGEVNKVKNFITGEIDSVPATARDYKKRGIPWVVIGDWNYGEGSSREHAALEPRH 684
                  5789********************************************************************************************** PP

                  TTEEEEEES-B-HHHHHHHHHTT-EEEEES CS
  Aconitase_C 100 lGikaviaeSFerIfennliknglLplefk 129
                  lG+ a+i++SF+rI+e+nl+k+g+Lpl+f 
   KHJ34903.1 685 LGGLAIITKSFARIHETNLKKQGMLPLTFI 714
                  ****************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (783 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.24s 00:00:00.84 Elapsed: 00:00:00.38
# Mc/sec: 6109.39
//
Query:       KHJ34904.1  [L=1945]
Description: hypothetical protein EV44_g4995 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
          0 1392.2   0.0          0 1391.7   0.0    1.2  1  Glucan_synthase  1,3-beta-glucan synthase component
    1.6e-43  148.1   1.2    5.2e-43  146.5   1.2    1.9  1  FKS1_dom1        1,3-beta-glucan synthase subunit FKS1, domai


Domain annotation for each model (and alignments):
>> Glucan_synthase  1,3-beta-glucan synthase component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ! 1391.7   0.0         0         0       1     818 [.     862    1689 ..     862    1690 .. 0.99

  Alignments for each domain:
  == domain 1  score: 1391.7 bits;  conditional E-value: 0
  Glucan_synthase    1 ffpknseaerRisfFaqslstplpealkvekmptFtvLiPhysEkillslkeiikeeekksrvtlleYLkqlypkeWknFvkdtkllaeeke 92  
                       ffp++seaerRisfFaqslstp+pe+l+v++mptFtv+iPhysEkillsl+eii+e+e +srvtlleYLkql+p+eW++Fvkdtk+la+e++
       KHJ34904.1  862 FFPSQSEAERRISFFAQSLSTPIPEPLPVDNMPTFTVMIPHYSEKILLSLREIIREDEPYSRVTLLEYLKQLHPHEWDCFVKDTKILADETS 953 
                       79****************************************************************************************** PP

  Glucan_synthase   93 eekeeeekkeeellkekiedlpfyliGfkssepeytlrtriWaslrsqtLyrtvsGfmnYskalkllyrvenaslvellseesekleeelee 184 
                       + + + ek+e++++k+ki+dlpfy+iGfks++peytlrtriWaslrsqtLyrt+sGfmnYs+a+kllyrven+++v++++ +s+kle+ele+
       KHJ34904.1  954 QFNGDYEKNEKDTAKSKIDDLPFYCIGFKSAAPEYTLRTRIWASLRSQTLYRTISGFMNYSRAIKLLYRVENPEVVQMYGGNSDKLERELER 1045
                       ******************************************************************************************** PP

  Glucan_synthase  185 laerKfklvvamqryakfkkeekenaelllkaypelkiayldeeaee.eeeekeyysvLidgsseideengkrkekyrirLsGnpilGdGKs 275 
                       +a+rKfklvv+mqryakfkkee+en+e+ll+ayp+l+iayldeea+  e ee+++ys+Lidg+se++ eng r++k+ri+LsGnpilGdGKs
       KHJ34904.1 1046 MARRKFKLVVSMQRYAKFKKEEMENTEFLLRAYPDLQIAYLDEEAPLvEGEEPRLYSALIDGHSEVM-ENGFRRPKFRIQLSGNPILGDGKS 1136
                       *******************************************8876699***************99.************************ PP

  Glucan_synthase  276 dnqnhaiiftRGeyiqviDanqdnyleEclKirsvLaefeeleleskkpyaeeiekeeekepvailGaREyiFsenigvLgdiaagkEqtFg 367 
                       dnqnhaiif+RGeyiq+iDanqdnyleEclKirsvLaefee+++++ +py++++ ++ +++pvailGaREyiFsenig+Lgd+aagkEqtFg
       KHJ34904.1 1137 DNQNHAIIFYRGEYIQLIDANQDNYLEECLKIRSVLAEFEEMTTDNVSPYTPGV-ENPKTNPVAILGAREYIFSENIGILGDVAAGKEQTFG 1227
                       ****************************************************99.57889******************************** PP

  Glucan_synthase  368 tlfaRtlaeiggklHYGHPDflnaifmttRGGvsKaqkglhlnEDiyaGmnallRgGrikHseYiqcGKGRDlGfgsilnFttKigaGmgEq 459 
                       tlfaRtla+iggklHYGHPDfln+ifmttRGGvsKaqkglhlnEDiyaGm+allRgGrikH+eY+qcGKGRDlGfgsilnFttKig+GmgEq
       KHJ34904.1 1228 TLFARTLASIGGKLHYGHPDFLNGIFMTTRGGVSKAQKGLHLNEDIYAGMTALLRGGRIKHCEYYQCGKGRDLGFGSILNFTTKIGTGMGEQ 1319
                       ******************************************************************************************** PP

  Glucan_synthase  460 lLsReyyylgtqlpldRfLsfyyahvGfhlnnllivlsvqlflllllnlgalekesiiceydkskkitdlekplgCynlkpvlewvkivvls 551 
                       +LsReyyylgtqlpldRfLsfyyah+Gfhlnn++i+lsvq+f+++l+nlgal++++i+c+y+ + +itd+  p+gC+n++pvl+wv + ++s
       KHJ34904.1 1320 MLSREYYYLGTQLPLDRFLSFYYAHPGFHLNNMFIMLSVQMFMICLINLGALRNQTILCNYNVNVPITDPLFPTGCANITPVLDWVYRSIIS 1411
                       ******************************************************************************************** PP

  Glucan_synthase  552 ifivffisflPllvqellergvlkavsrllkhllslsplfevfvcqiyaksllkdllfGgAkYiatGRgfavtrisfaelysrfasssiykg 643 
                       ifivffisf+Pl+vqel+erg+++a++rl k+++slsp+fevfvcqiya+++++dl+fGgA+Yi+tGRgfa++ri+f +lysrfa  siy g
       KHJ34904.1 1412 IFIVFFISFVPLVVQELTERGFWRAATRLGKQFCSLSPFFEVFVCQIYANAFQQDLSFGGARYIGTGRGFATARIPFGILYSRFAGPSIYLG 1503
                       ******************************************************************************************** PP

  Glucan_synthase  644 iellllllfatvtvwqaallyfwitvvslilaPflfnPhqfslldffvDyrdflrWlsrgnskskeesWisyvrqsrlritglkkkvlgees 735 
                       ++ l++llfat+tvwq+al+yfw+t+++++ +Pf++nPhqf+++dff+DyrdflrWlsrgns+s+ +sWi y+r sr+ritg+k+k+lg++s
       KHJ34904.1 1504 ARSLMMLLFATLTVWQPALIYFWVTLLAMCTSPFIYNPHQFAWNDFFIDYRDFLRWLSRGNSRSHGSSWIAYCRLSRTRITGYKRKALGDPS 1595
                       ******************************************************************************************** PP

  Glucan_synthase  736 ekeskdvkrasllnlllseiilellvvlllliaylfinsqtgv...........keaeatnsvlrlaivsllpillnvvvllvlfalslllg 816 
                       +k s dv ra ++nl++ eii +llvv+++l++ylfin+q gv           + ++atns+lr+ +v+++pi++n+ +l+v+f +++++g
       KHJ34904.1 1596 SKMSGDVPRADFSNLFFGEIIGPLLVVAVTLVPYLFINAQVGVlaennkdklgsAGVQATNSLLRVGVVAFAPIAINAGILAVMFSMACCMG 1687
                       *********************************************9999999888899*********************************9 PP

  Glucan_synthase  817 pl 818 
                       p+
       KHJ34904.1 1688 PI 1689
                       97 PP

>> FKS1_dom1  1,3-beta-glucan synthase subunit FKS1, domain-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.5   1.2   5.8e-47   5.2e-43       2     128 ..     355     462 ..     354     463 .. 0.96

  Alignments for each domain:
  == domain 1  score: 146.5 bits;  conditional E-value: 5.8e-47
   FKS1_dom1   2 kvlqiaLylliWGEaanvRflpeclcyifkcaadyleseeakeeeeelkeleeileekvseaaaseeeesfLkkvitPlyevlrkqeaeknkegkyvrr 100
                 +++q+aLyll+WGEa++vRf+peclc+ifkca dyl+s ++++  e +                  +e +fL++vitPly+++r+q +e+ ++gkyvrr
  KHJ34904.1 355 RIRQLALYLLCWGEANQVRFMPECLCFIFKCADDYLNSPACQNLVEPV------------------DEFTFLNNVITPLYQYCRDQGYEI-QDGKYVRR 434
                 799*************************************99999988..................99**********************.9999**** PP

   FKS1_dom1 101 ekdHskiigYDDlNelFWskegieklkl 128
                 e+dH+kiigYDD+N+lFW++egie +++
  KHJ34904.1 435 ERDHNKIIGYDDCNQLFWYPEGIELIVM 462
                 ***********************88876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1945 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       854  (0.0476323); expected 358.6 (0.02)
Passed bias filter:                      432  (0.024095); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.07u 0.28s 00:00:01.35 Elapsed: 00:00:00.45
# Mc/sec: 12921.27
//
Query:       KHJ34905.1  [L=248]
Description: putative major facilitator superfamily protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      395  (0.0220313); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1865.52
//
Query:       KHJ34906.1  [L=520]
Description: putative ubiquitin carboxyl-terminal hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-46  159.3   4.5    1.8e-46  158.7   4.5    1.3  1  UCH             Ubiquitin carboxyl-terminal hydrolase
    1.5e-20   74.1  15.3    1.5e-20   74.1  15.3    1.8  2  UCH_1           Ubiquitin carboxyl-terminal hydrolase
    4.5e-05   23.7   1.2    0.00022   21.5   1.2    2.3  1  zf-UBP          Zn-finger in ubiquitin-hydrolases and other p
  ------ inclusion threshold ------
       0.24   11.0   3.4        3.6    7.3   0.1    3.1  3  zf_UBZ          Ubiquitin-Binding Zinc Finger
        1.2    9.3   6.6        1.8    8.6   1.4    2.5  2  Mut7-C          Mut7-C RNAse domain
        2.1    8.1  10.4        7.1    6.4   3.5    3.5  3  Ribosomal_S27e  Ribosomal protein S27


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.7   4.5   6.1e-50   1.8e-46       2     257 .]     187     514 ..     186     514 .. 0.87

  Alignments for each domain:
  == domain 1  score: 158.7 bits;  conditional E-value: 6.1e-50
                 EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHH.SH-CCEE--HHHHHHH....HHHSGGGTSS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx....xxxxxxxxxx RF
         UCH   2 GlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkell.kskskavsPkklkktl....sklaksfsgy 95 
                 G+ N+G tCy+n +lQc+++ p lr++ l ++++++e   k              +++++  +f+e++  + ++ +   ++++++    +k +++++++
  KHJ34906.1 187 GIYNMGSTCYINVILQCIVNNPLLRNWYLGCNHQSTECPVK------------ACMSCSIDIMFQEFYsPDATSGFCAAQVLACFwlskRKAYEELASN 273
                 9************************9999975555555554............459************94445555555554444111145566699** PP

                 STCEHHHHHHHHHHHHHHHHCC.........HCCCHHHHHHCCCTTSHHHHHH-EEEEE........................................ CS
                 xxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxx........................................ RF
         UCH  96 kqqDaqEflaflLdqlhedlnr.........evaeekwkkhlkrndslitdlfegqlks........................................ 145
                 + qDa+Efl+fl ++lhe  +           +++ +++ ++ + +++i++ f+g+ +s                                        
  KHJ34906.1 274 NEQDAHEFLTFLAEELHEINSGsresneelaVSKKRRTTASDGSCKCIIHQTFYGKSQSiiicqnchrskasvqafmdvslaidqlpknratgksstlq 372
                 *****************9888899999999655666669999********************************************************* PP

                 ..........................EEEEEEB-SEEEEEEESEEETEE.EEE--SEEB--SEEE-G......GGBSS-BTTS-TCS-BEEEEEEEEEE CS
                 ..........................xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH 146 ..........................klklkrlPeiLiihlkRfsynss.ksKlntkvefpeeldls......sylaeekkkkteekkkYeLiavvvHs 211
                                            +++ +lP++L+i++kRf+ +s+   Kl+t+v fp++l++       s++ + k+++ +++++YeL +vv H 
  KHJ34906.1 373 srleeefkkpevceyncecgsnkakkVTSIMSLPNVLCIQFKRFKQTSTgALKLSTTVLFPLKLNMLpfthhsSIC-KTKNSSLARECTYELQSVVEHV 470
                 *************************9999*****************9999************99999555553434.344445566777********** PP

                 SCTTSEEEEEEEECTTTTEEEEEETTEEEEE-HHCCCTT.CEEEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx RF
         UCH 212 GslssGHYvayiknekngkWykydDetvkevkeeeevls.sayiLfY 257
                 G+l++GHYv+y +    ++W+k++D++v+  +++ evl+ +ay+LfY
  KHJ34906.1 471 GELKKGHYVSYSR--VGNQWFKFNDHKVTLASKS-EVLNsEAYMLFY 514
                 *************..8899*************88.78888******* PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       0.9   2.7e+03     220     231 ..      89     101 ..      70     140 .. 0.55
   2 !   74.1  15.3   4.9e-24   1.5e-20       5     320 .]     190     496 ..     187     496 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.9
                 xxxxxxx.xxxxx RF
       UCH_1 220 alnakle.eeeel 231
                 +++++ + +e+++
  KHJ34906.1  89 CIQCNTTvTEKNR 101
                 3333333222222 PP

  == domain 2  score: 74.1 bits;  conditional E-value: 4.9e-24
                 xxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   5 nhivnsYlNslLQvlyfipplrnlal..shlakeckkehcLlcElgflfdmldkak.glncqasnFlralssipeasalglileeeeetekssaislss 100
                 n  +++Y+N +LQ+    p+lrn +l  +h+++ec+ + c++c    +f+       ++   a   l ++  ++ ++  +l  +++e+   +       
  KHJ34906.1 190 NMGSTCYINVILQCIVNNPLLRNWYLgcNHQSTECPVKACMSCSIDIMFQEFYSPDaTSGFCAAQVLACFWLSKRKAYEELA-SNNEQ---D------- 277
                 6678******************77764489*9*****************666655525588888999999977766666664.32211...2....... PP

                 xxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxx RF
       UCH_1 101 liqsfnrflldqlekelketkkns...............seeesaieqllgtkaettirclkCgseksrksstlvldlkyPk.psnekkeakvtfasil 183
                    +f +fl ++l++  + +++++                + + +i+q +  k ++ i c++C++ k   + ++ ++l   + p+n+++ +    +s l
  KHJ34906.1 278 -AHEFLTFLAEELHEINSGSRESNeelavskkrrttasdGSCKCIIHQTFYGKSQSIIICQNCHRSKASVQAFMDVSLAIDQlPKNRATGK----SSTL 371
                 .24688888888888877766666788888888888887778889999***************************9996633233334444....6777 PP

                 xxxxxxxxxxxxxxx.xx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 184 ksslerekttrawCe.kC.kryqpteqrktvknlPpvLalnakleeee..elelwktknwlpleiklsldedknleeklkeerekakaekeikvYeLqs 278
                 +s le+e +++ +Ce +C       ++  ++ +lP+vL+++ k+++++      ++t+  +pl++++     +     +   ++k+++  +  +YeLqs
  KHJ34906.1 372 QSRLEEEFKKPEVCEyNCeCGSNKAKKVTSIMSLPNVLCIQFKRFKQTstGALKLSTTVLFPLKLNMLPFTHH-----SSICKTKNSSLARECTYELQS 465
                 77777777779999845644445555666677***********996641222334445888888888444333.....3333333445677899***** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 279 vvvhigdskesghLvslvkvaekelerdppesqWylFNDflV 320
                 vv h+g + ++gh+vs+ +v           +qW++FND +V
  KHJ34906.1 466 VVEHVG-ELKKGHYVSYSRV----------GNQWFKFNDHKV 496
                 ******.666**********..........369******887 PP

>> zf-UBP  Zn-finger in ubiquitin-hydrolases and other protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   1.2   7.2e-08   0.00022      11      63 ..      86     134 ..      57     135 .. 0.87

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 7.2e-08
                 EEEETTT--EEE-TTTT-HHHHHHHHH---EEEETTT--EEETTTTEEBE-GC CS
      zf-UBP  11 lWlCLkCghvgCgrksnghalkHyeetrHplavdlstlsvycyscddevedke 63 
                 ++lC++C + +  +      ++H  et H + v+ +t+ v+c  c+d+v d++
  KHJ34906.1  86 NYLCIQCNTTVTEK----NRKRHSDETSHRCYVESRTGAVFCQICNDFVLDPT 134
                 69999999998887....567899*************************9986 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.1    0.0012       3.6       2      22 ..      86     106 ..      85     106 .. 0.95
   2 ?    3.2   0.0     0.022        65       3      19 ..     121     137 ..     119     137 .. 0.87
   3 ?   -1.3   0.1      0.57   1.7e+03       4      10 ..     335     341 ..     333     344 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0012
      zf_UBZ   2 tylCerCgkeipeselqEHeD 22 
                 +ylC +C++++ e  +  H+D
  KHJ34906.1  86 NYLCIQCNTTVTEKNRKRHSD 106
                 69*****************99 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.022
      zf_UBZ   3 ylCerCgkeipeselqE 19 
                 ++C+ C+  ++++ l+E
  KHJ34906.1 121 VFCQICNDFVLDPTLEE 137
                 79*******99998876 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 0.57
      zf_UBZ   4 lCerCgk 10 
                 +C+ C++
  KHJ34906.1 335 ICQNCHR 341
                 7****97 PP

>> Mut7-C  Mut7-C RNAse domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.6   1.4   0.00061       1.8      90     130 ..      86     127 ..      72     130 .. 0.85
   2 ?    2.6   0.3     0.044   1.3e+02      94     131 ..     297     341 ..     260     342 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.6 bits;  conditional E-value: 0.00061
      Mut7-C  90 lsrCvaCngeleevekeevkervpekvyeeade.ftrCekCr 130
                    C++Cn+ ++e ++++ +++ +++ y e+++ ++ C+ C+
  KHJ34906.1  86 NYLCIQCNTTVTEKNRKRHSDETSHRCYVESRTgAVFCQICN 127
                 568**********999999999888888777777999**997 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.044
      Mut7-C  94 vaCngeleevekeevker.......vpekvyeeadeftrCekCrk 131
                  + n+el+  +k + + +       +++  y ++++++ C++C++
  KHJ34906.1 297 RESNEELAVSKKRRTTASdgsckciIHQTFYGKSQSIIICQNCHR 341
                 55677777666666655567888889999**************98 PP

>> Ribosomal_S27e  Ribosomal protein S27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.2      0.49   1.5e+03      28      38 ..      88      98 ..      86      99 .. 0.80
   2 ?    3.4   0.0     0.021        62      26      40 ..     120     134 ..     113     137 .. 0.89
   3 ?    6.4   3.5    0.0024       7.1      12      34 ..     319     341 ..     317     344 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.49
                    EESSSTCEEEE CS
  Ribosomal_S27e 28 kCisCgkvLve 38
                    +Ci+C +++ e
      KHJ34906.1 88 LCIQCNTTVTE 98
                    69999998865 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.021
                     -EEESSSTCEEEEEC CS
  Ribosomal_S27e  26 vvkCisCgkvLvePt 40 
                     +v C++C   + +Pt
      KHJ34906.1 120 AVFCQICNDFVLDPT 134
                     799*********998 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0024
                     TTS-EEEEESS-SS-EEESSSTC CS
  Ribosomal_S27e  12 dCenetvvFshaatvvkCisCgk 34 
                     +C   ++ ++++++++ C+ C +
      KHJ34906.1 319 KCIIHQTFYGKSQSIIICQNCHR 341
                     7999*****************65 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       991  (0.0552736); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.22s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 3910.40
//
Query:       KHJ34907.1  [L=536]
Description: putative beta-glucanosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   8.6e-131  435.9   0.8   1.2e-130  435.4   0.8    1.2  1  Glyco_hydro_72  Glucanosyltransferase
    6.7e-22   78.0   5.1    1.6e-21   76.7   5.1    1.7  1  X8              X8 domain
  ------ inclusion threshold ------
      0.076   12.4   0.0       0.12   11.7   0.0    1.2  1  PALP            Pyridoxal-phosphate dependent enzyme
       0.12   11.8   0.1       0.33   10.3   0.0    1.8  2  Cellulase       Cellulase (glycosyl hydrolase family 5)


Domain annotation for each model (and alignments):
>> Glyco_hydro_72  Glucanosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  435.4   0.8  2.7e-134  1.2e-130       7     314 ..      22     331 ..      17     332 .. 0.97

  Alignments for each domain:
  == domain 1  score: 435.4 bits;  conditional E-value: 2.7e-134
                     TTS--EEEETTEEEETTT-BBE-EEEEE--BE-----......-SSB-GGG-HHHHHHHHHHHHHHT-SEEEES---TTS--HHHHHHHHHTT-E CS
  Glyco_hydro_72   7 eaveaieikgnkffdsksgeqfyikGvdyqpggseev......sslvdpladaeaCkrdikllkelgvntvrvyavdnskdhdeCmkalsdagiy 95 
                     +++++i ikg +ff  ++g++f+i+Gv+yq++  + +      +s+ dplad++aCkrdi+ll+elg+n++rvya+d+++dh+ Cmk+l+dagiy
      KHJ34907.1  22 ADLQPIIIKGSHFF-YENGTEFFIRGVAYQQDIINLSasstgtTSYSDPLADKNACKRDIPLLQELGANVIRVYAIDPTADHSFCMKLLQDAGIY 115
                     6889**********.68899***********976622356677999************************************************* PP

                     EEEES-BTTBS--TTS-..---HHHHHHHHHHHHHHTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS----EEEEE---TTT CS
  Glyco_hydro_72  96 vildlnepkesinradpassynedllervfkvidafkeyknvlgffaGnevvndksntaasayvkavvrdvkeyikkkkerkiPvGysaaddael 190
                     vi dl++p++sinr++p  +++++l+ ++  vida+++y+nv+gffaGnev n+ +nt+asa+vka+vrd+k+yik+kk+r + vGy+++dd ++
      KHJ34907.1 116 VIQDLSNPTSSINRDKP--TWTTELFANYAGVIDALAKYSNVIGFFAGNEVSNEVKNTEASAFVKAAVRDMKSYIKAKKYRPMGVGYATNDDPAI 208
                     *****************..**************************************************************************** PP

                     HHHHHHHTTBTT-..--S-EEEEE----SS--HHHHSHHHHHHHHTT-SS-EEEEEE---SSSS---THHHHHTSHHHHTTEEEEEES-SB--SS CS
  Glyco_hydro_72 191 rvelaeylaCgdeddkadffglnmyeWCgkssfktsGydertkefenysiPlflseyGCnkvtprkftevealyseemtsvfsGGlvyeyseean 285
                     r+ la+y++Cgd ++++df+g+n y+WCg ssf+ sGyd+rt ef+nys+P f++eyGCn+++prkftev+a+y+++mt+v+sGG++y+y++ean
      KHJ34907.1 209 RIPLAHYFNCGDPAESIDFWGYNIYSWCGDSSFTNSGYDQRTLEFSNYSVPAFFAEYGCNTIRPRKFTEVQAIYGDQMTKVWSGGIMYMYFQEAN 303
                     *********************************************************************************************** PP

                     S--SEEE-TTS-EEE-THHHHHHHHHHH- CS
  Glyco_hydro_72 286 nyGlvkiddddvkkllkdfenlkseykki 314
                     +yGlv++++d+v+ +l df++l+++++ +
      KHJ34907.1 304 DYGLVTVSGDKVS-KLPDFTALSKQLATV 331
                     ************9.9*********99876 PP

>> X8  X8 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.7   5.1   3.6e-25   1.6e-21       1      75 [.     380     456 ..     380     457 .. 0.95

  Alignments for each domain:
  == domain 1  score: 76.7 bits;  conditional E-value: 3.6e-25
                 -EEEE-TTS-HHHHHHHHHHHTTTSS..SSTT---SS.....S-SS--TTHHHHHHHHHHHHHHTSSGGG--S-SSE CS
          X8   1 lwCvvkdsvdeeelgdlldyaCgead..CtaiqangttGkYGcyspcsvkqklsyalnsYYqkqgkkssaCdFsgsa 75 
                 l+C++k+  +++e ++l++ +Cg  +  C +i+an++tG+YG+ys+c + q+ls+a+++YY+ q++++saC+F+g+a
  KHJ34907.1 380 LSCTAKSGLSSNETATLFSSVCGLDSkaCVGISANASTGTYGAYSMCLPDQQLSFAMDQYYKLQKSADSACNFGGNA 456
                 68**********************4446***********************************************98 PP

>> PALP  Pyridoxal-phosphate dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   2.7e-05      0.12      88     138 ..      74     124 ..      70     161 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.7e-05
                 TS-HHHHHHHHHTT-EEEEE.CCHHHHHHHHHHHHHHHSTTCEE--TTTSHH CS
        PALP  88 daspekvallrllGaevvev.ggdydeavaaaaelaaegegaylvsqfdnpt 138
                 +a +  + ll++lGa+v++v   d+++  + +++l+++  g+y++++ +npt
  KHJ34907.1  74 NACKRDIPLLQELGANVIRVyAIDPTADHSFCMKLLQD-AGIYVIQDLSNPT 124
                 5666778899**********7666777777799*****.************9 PP

>> Cellulase  Cellulase (glycosyl hydrolase family 5)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   7.4e-05      0.33      67     158 ..     105     187 ..      57     196 .. 0.80
   2 ?   -2.2   0.0      0.48   2.2e+03     216     248 ..     237     269 ..     215     303 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 7.4e-05
                 HHHHHHHTT-EEEEEEESSTTTCSSSSTTTTHHH.HHHHHHHHHHHHHHHHTTTTTTEEEESSSS--STTCTCCTCHHHTTHHHHHHHHHHHH CS
   Cellulase  67 vvkyakenglyvildiHseegwltkadgnssedt.aeeffkklwtqiAerykkndevvifelmNEPhgnntgaewtseeadevkayaeeaika 158
                  +k+ +++g+yvi d+ ++    t+   n ++ t ++e f++  + + + ++k+++v++f   NE   + ++    +e+++ vka++  +   
  KHJ34907.1 105 CMKLLQDAGIYVIQDLSNP----TSS-INRDKPTwTTELFAN-YAGVIDALAKYSNVIGFFAGNEVSNEVKN----TEASAFVKAAVRDMKSY 187
                 578899************6....233.333333336788888.89999******************997665....34455555555555444 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.48
                 THHHHHHHHHHHHHHHHHHTTSEEEEEEEESST CS
   Cellulase 216 tdktnlaqrledaakylvekgipviigEfGgsn 248
                 +d++ + + +++ +  + +  +p++  E+G ++
  KHJ34907.1 237 GDSSFTNSGYDQRTLEFSNYSVPAFFAEYGCNT 269
                 556666777777888888888999999999643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       605  (0.0337442); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3808.34
//
Query:       KHJ34908.1  [L=144]
Description: hypothetical protein EV44_g6531 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.16   12.2   0.5       0.34   11.2   0.0    1.8  2  FAF       Fantastic Four meristem regulator
       0.18   11.8   2.1       0.25   11.4   2.1    1.1  1  Mit_KHE1  Mitochondrial K+-H+ exchange-related


Domain annotation for each model (and alignments):
>> FAF  Fantastic Four meristem regulator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.8e-05      0.34       3      47 ..      12      52 ..      11      58 .. 0.88
   2 ?   -2.8   0.1      0.89     8e+03      29      40 ..     101     112 ..     100     121 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.8e-05
         FAF  3 PPPlpslsgrspwvllrshredGRLvleevkvpsrheylraeRed 47
                PPP+ps  +  ++   r+ +++  L l++ + +  ++ ++ +Re+
  KHJ34908.1 12 PPPIPSQ-K--KSCSARPATSGTQLNLRANREK-ASCAFKISREQ 52
                *****99.4..5799***************999.5888**99997 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.89
         FAF  29 leevkvpsrhey 40 
                 l+e +v+++++ 
  KHJ34908.1 101 LKEKRVDQKQQR 112
                 666677665544 PP

>> Mit_KHE1  Mitochondrial K+-H+ exchange-related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   2.1   2.8e-05      0.25       4      86 ..      45     129 ..      44     143 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.8e-05
    Mit_KHE1   4 llpittkrsliYcekse.eilskssaskaeskekledkltnkaaktwaklekaeegwkkk.ivelgeklldripyeElaLksips 86 
                 +++i++++  iY+ k++    ++++++++e+ +++++ l + ++ tw+   + +  +k+k + +  +++l++ + eE a +++++
  KHJ34908.1  45 AFKISREQERIYITKRQaGFGKQEAQKAKEHLQSAQKNLYAGVTCTWHAAANLPAILKEKrVDQKQQRILKQKEREEEAKRELER 129
                 689*************9666677777777889999*********************77651556678899999999988777764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1840  (0.102627); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1058.27
//
Query:       KHJ34909.1  [L=209]
Description: putative dash complex subunit dam1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.7e-29   99.5   3.1    9.8e-29   98.9   3.1    1.2  1  DASH_Dam1  DASH complex subunit Dam1


Domain annotation for each model (and alignments):
>> DASH_Dam1  DASH complex subunit Dam1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.9   3.1   5.5e-33   9.8e-29       1      56 []      59     114 ..      59     114 .. 0.99

  Alignments for each domain:
  == domain 1  score: 98.9 bits;  conditional E-value: 5.5e-33
   DASH_Dam1   1 lepafaeLaDsletLdknledLqqihesLsdfNeSFasfLYGLnmnafcvdFpeaP 56 
                 lepafaeL+Ds+++L++n+++Lq +hesL++fNe+F+sfLYGL mnafcvdFpeaP
  KHJ34909.1  59 LEPAFAELSDSMADLEANFMHLQFMHESLARFNENFSSFLYGLHMNAFCVDFPEAP 114
                 79*****************************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1530.82
//
Query:       KHJ34910.1  [L=380]
Description: putative 26s proteasome regulatory subunit rpn9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-06   27.9   0.0    7.4e-06   26.4   0.0    1.8  2  PCI       PCI domain
    8.4e-06   25.3   0.9    1.5e-05   24.4   0.9    1.5  1  Rpn9_C    Rpn9 C-terminal helix
  ------ inclusion threshold ------
      0.078   12.5   0.0       0.23   11.0   0.0    1.7  2  Dam       DNA N-6-adenine-methyltransferase (Dam)


Domain annotation for each model (and alignments):
>> PCI  PCI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.8   1.1e+04      63      81 ..     131     155 ..     130     158 .. 0.74
   2 !   26.4   0.0   1.2e-09   7.4e-06       4     101 ..     237     334 ..     223     338 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.8
                 HHHHHHHHTSSH......HHHHHHH CS
         PCI  63 lerlaklldlsv......devEkil 81 
                 le+  k ldls+      d vE i+
  KHJ34910.1 131 LEDARKDLDLSEkildkfDSVETIV 155
                 5677788888888888888888777 PP

  == domain 2  score: 26.4 bits;  conditional E-value: 1.2e-09
                 HHHHHHHHHTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH....CESEEEHHHHHHHHTSSHHHHHHHHHHHHHTTSSSEEEETTT CS
         PCI   4 sdllkalrsgnlsgfseelkdleeelladdglaqllesLekkvrerllrqvsk....iyssislerlaklldlsvdevEkilvklIrdgeirakidqes 98 
                  +ll a+++g+ls ++ +          ++ l  + + L++k++  +l + ++      +  s++++ +   +  de+E++++k+ + g+++++idq++
  KHJ34910.1 237 CELLFAFNRGDLSTYDVLSGHI----ASNPLLFRHSDGLKQKIYIAALTEAVFrrppHDRAMSFKTIVEETRVRPDEIEYLIMKALSLGLLKGTIDQVN 331
                 5788888888888887666655....899999*****************99999**777789************************************* PP

                 TEE CS
         PCI  99 giv 101
                 +i 
  KHJ34910.1 332 EIA 334
                 985 PP

>> Rpn9_C  Rpn9 C-terminal helix
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.9   2.6e-09   1.5e-05       3      29 ..     345     371 ..     343     372 .. 0.94

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 2.6e-09
                 SHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      Rpn9_C   3 NeeQInkMKdrLVeWdeqVtkLGkkie 29 
                 N  QI+ M+ rL eWd+ V +LG  ie
  KHJ34910.1 345 NMKQIDSMRVRLQEWDSSVNSLGNWIE 371
                 889********************9998 PP

>> Dam  DNA N-6-adenine-methyltransferase (Dam)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.39   2.4e+03      64      83 ..      47      72 ..      21     110 .. 0.56
   2 ?   11.0   0.0   3.9e-05      0.23      60     117 ..     281     337 ..     263     366 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.39
         Dam 64 flNPPYSri......lrfvkkaaeqm 83
                f N P S++      + f+ k a ++
  KHJ34910.1 47 FFNEPESKSqrlplyKSFILKFADKI 72
                56666666655555534444443333 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 3.9e-05
         Dam  60 ngaiflNPPYSrilrfvkkaaeqmreknqkivmLlkadtstaWfkealedadevafit 117
                 ++a+f  PP  r++ f k  +e++r + ++i +L+  + s +  k ++++++e+a i+
  KHJ34910.1 281 TEAVFRRPPHDRAMSF-KTIVEETRVRPDEIEYLIMKALSLGLLKGTIDQVNEIACIN 337
                 5799**********99.7789999*******************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.44
# Mc/sec: 2614.94
//
Query:       KHJ34911.1  [L=377]
Description: putative nadh-ubiquinone oxidoreductase 39 kda [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-13   50.8   0.0    2.9e-13   49.9   0.0    1.4  1  Epimerase       NAD dependent epimerase/dehydratase family
    4.7e-12   46.0   0.0    7.2e-12   45.4   0.0    1.2  1  NmrA            NmrA-like family
    7.8e-11   42.2   0.0      1e-10   41.8   0.0    1.3  1  NAD_binding_10  NAD(P)H-binding
    1.1e-10   40.9   0.0    2.6e-10   39.8   0.0    1.5  1  3Beta_HSD       3-beta hydroxysteroid dehydrogenase/isomerase
    6.5e-07   29.0   0.0      4e-06   26.5   0.0    1.9  2  GDP_Man_Dehyd   GDP-mannose 4,6 dehydratase
    1.1e-06   27.9   0.0    2.1e-05   23.8   0.0    2.3  1  RmlD_sub_bind   RmlD substrate binding domain
    4.8e-05   22.6   0.1     0.0098   15.1   0.1    2.4  2  NAD_binding_4   Male sterility protein
    0.00044   19.8   0.0    0.00073   19.1   0.0    1.3  1  adh_short       short chain dehydrogenase
     0.0077   16.2   0.0        2.4    8.1   0.0    3.0  3  KR              KR domain


Domain annotation for each model (and alignments):
>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   0.0   1.4e-16   2.9e-13       1     118 [.      53     168 ..      53     186 .. 0.84

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 1.4e-16
                 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC....EEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHHHSHHHHHHHHTHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl....elveldltdrsalerlfkeeqpdavihlAavggvaassedpadfieknlqgt 95 
                 + V GatGf+G+++v++l+++g +vi+  r++ a+++ +         + e dl++  +le+ ++  + dav++l +   +  +++    + + +++g 
  KHJ34911.1  53 VTVFGATGFLGRYIVNRLARQGCTVIVPFREEMAKRHLQVSGDlgriIFLEYDLRNTPSLEESVR--HSDAVYNLVGRTYPTKNFD----LEDVHVEGI 145
                 5799********************99999997777766555447*99******************..9*******77666655554....45689**** PP

                 HHHHHHHHHHTCTEEEEEEEGGG CS
   Epimerase  96 lnlleaarkagvkrllflsSsev 118
                  +++ea  k++v+rl+++sS   
  KHJ34911.1 146 ERIAEATAKYDVDRLIHVSSYNA 168
                 ********************443 PP

>> NmrA  NmrA-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.4   0.0   3.6e-15   7.2e-12       1     227 [.      53     278 ..      53     296 .. 0.82

  Alignments for each domain:
  == domain 1  score: 45.4 bits;  conditional E-value: 3.6e-15
                 EEESSTTSHHHHHHHHHHHHHT-EEEEEES-S-SHHHHHHH.HSTTEEE.ES-TT-HHHHHHHHTT-SEEEE---GG.........S-HHHHHHHHHHH CS
        NmrA   1 IlviGaTGrqGksvvrallkaghkvralvRdtkselakslk.eaGvelv.kgdlddkeslvealkgvdvvfsvtgfy.........skeiedgkklvdA 88 
                 ++v+GaTG +G+++v+ l+++g +v +  R++  ++  +++ + G  +  + dl +  sl+e ++ +d+v+  +g +         + ++e   ++++A
  KHJ34911.1  53 VTVFGATGFLGRYIVNRLARQGCTVIVPFREEMAKRHLQVSgDLGRIIFlEYDLRNTPSLEESVRHSDAVYNLVGRTyptknfdleDVHVEGIERIAEA 151
                 79******************************777766666267777668**********************999878999****99999999****** PP

                 HHHHS-SEEEEEE---GG.GT.SSS---TTTHHHHHHHHHHHHCTS-EEEEEE-EEGGG-BSSS-SS-BEEE-TTS.-EEEEESS-TTS-EE.-HHHHH CS
        NmrA  89 akeaGvkhfiySslgddndrsnaeepavphfdsKaeieeyvralgipytfvyagffmenflsllaqlkvgdtappedkvtllgpgnpkavll.daeeDi 186
                  ++  v ++i  s  +++ +s     + +++++K + e + r++   +t+v++    + f   l      ++a      ++l+  n ++++  +++ D+
  KHJ34911.1 152 TAKYDVDRLIHVSSYNADPKS-----SSEFYSTKGRGEMVARKIFPETTIVRPAPMFG-FEDQLLH----KLAGV---TNFLTSNNMQERYWpVHVIDV 237
                 **********98888888777.....7889*********9999966666666654444.4443333....23333...344555555555555799*** PP

                 HHHHHHHHHHHHHH.TTEEEEE-SEEE-HHHHHHHHHHHHTS CS
        NmrA 187 Gafvikilkdprkl.kgkriklagntlsgneivelfekkigk 227
                 G++  k+l d +++ ++  +  ++n+ s  ei++l  k+i k
  KHJ34911.1 238 GEALEKMLFDDSTAeQTYELYGPKNY-STAEIAQLVDKEIVK 278
                 ******99998888577778888776.7789****9999866 PP

>> NAD_binding_10  NAD(P)H-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   0.0   5.2e-14     1e-10       1     133 [.      57     189 ..      57     248 .. 0.79

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 5.2e-14
                     TTTSHHHHHHHHHHHHC-T-EEEEEETT...HHHCHHHHCTTTCEEEE--TT-CCHHHHHHTT-SEEEES---TCCHHHH.........HHHHHH CS
  NAD_binding_10   1 GAtGkvGrllvkellargghevtalvRn...peklaeleaeeglevvegdvtdvedlaealkgadaVvsalggggkdeeg.........aknivd 83 
                     GAtG  Gr++v++l+++g  +v +  R+   + +l+   +  ++  +e d+ ++ +l+e +++ daV+  +g++  +++           ++i++
      KHJ34911.1  57 GATGFLGRYIVNRLARQG-CTVIVPFREemaKRHLQVSGDLGRIIFLEYDLRNTPSLEESVRHSDAVYNLVGRTYPTKNFdledvhvegIERIAE 150
                     9****************5.99999999944345555444669999**************************998884444445557788****** PP

                     HHHHCT--EEEEEEETTTTSGCGCHHHHHHHHCCHHHHHHHHHHHHHHHH CS
  NAD_binding_10  84 aakeagvkRfvlvsaigvgdevpgefgewnkellkaylaakraaeellra 133
                     a  + +v R++ vs+ +++ ++ +ef           +  k + e + r+
      KHJ34911.1 151 ATAKYDVDRLIHVSSYNADPKSSSEF-----------YSTKGRGEMVARK 189
                     ******************95433333...........4444444444444 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.8   0.0   1.3e-13   2.6e-10       2     119 ..      55     168 ..      54     180 .. 0.87

  Alignments for each domain:
  == domain 1  score: 39.8 bits;  conditional E-value: 1.3e-13
   3Beta_HSD   2 vtGgaGFlGralvkeLvrleelkevrvlDlrespelleelskvnvkkviegDvtdkdkleealegvdvvihlaslvdvagkltedeimkvnvkGTrnvl 100
                 v G++GFlGr++v++L r +    +  +  +  ++ l+ +  ++++ ++e D++++++lee ++ +d+v  l + +  ++  ++d + +v v+G + + 
  KHJ34911.1  55 VFGATGFLGRYIVNRLARQGC-TVIVPFREEMAKRHLQVSGDLGRIIFLEYDLRNTPSLEESVRHSDAVYNLVGRTYPTK--NFD-LEDVHVEGIERIA 149
                 89******************4.5555566666677778888899999************************966665555..777.89*********** PP

   3Beta_HSD 101 eacvkagvrvlvYtSsaev 119
                 ea  k +v +l+++Ss+++
  KHJ34911.1 150 EATAKYDVDRLIHVSSYNA 168
                 *****************96 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0     2e-09     4e-06       2     129 ..      55     165 ..      54     201 .. 0.83
   2 ?    0.2   0.0       0.2   3.9e+02     215     267 ..     222     277 ..     208     289 .. 0.69

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 2e-09
                    EETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHHHT-SEEEE--S---HHHHTTSHHH CS
  GDP_Man_Dehyd   2 iTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklhkgDltDssslerllaevqpdevynLAAqshVdvsfekPey 97 
                    + G +Gf G y++++L ++g +v++  r + +      +hl+ +      +++ + + Dl+++ sle+ +++   d+vynL +     + f+    
     KHJ34911.1  55 VFGATGFLGRYIVNRLARQGCTVIVPFREEMA--K---RHLQVSG---DLGRIIFLEYDLRNTPSLEESVRHS--DAVYNLVGRTYPTKNFDL--- 137
                    78*********************776665544..2...3443322...2479********************9..9************99995... PP

                    HHHHHTHHHHHHHHHHHHCT..TTSEEEEEEE CS
  GDP_Man_Dehyd  98 taevnvlGtlrLLeairalglekkvrfyqaSt 129
                      +v v G  r+ ea  ++ ++   r++++S+
     KHJ34911.1 138 -EDVHVEGIERIAEATAKYDVD---RLIHVSS 165
                    .899999*********999886...7777776 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.2
                    TTTT-EEEE.EEHHHHHHHHHHHHHCSS-..--EEE-TT-EEECHHCHHCCHHCCC CS
  GDP_Man_Dehyd 215 GnldakRdw.ghvkDyveamwlmlqqdkp..edyviatgethsvrefvelaflelg 267
                     n  + R w  hv D+ ea+ +ml  d++  ++y +   +++s  e+++l  +e++
     KHJ34911.1 222 SNNMQERYWpVHVIDVGEALEKMLFDDSTaeQTYELYGPKNYSTAEIAQLVDKEIV 277
                    566778999669**********9977654225566777777777766666555554 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.8   0.0     1e-08   2.1e-05       3     235 ..      53     280 ..      51     292 .. 0.76

  Alignments for each domain:
  == domain 1  score: 23.8 bits;  conditional E-value: 1e-08
                    EEEESTTSHHHHHHHHHCTTTSEEEEEE-TT...................T--TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHT CS
  RmlD_sub_bind   3 ilvtGanGqlGseLakqlaeeglevlaltre...................eldltdaeavaellkeakpdvvvnaAAytavDkaEseeeaayavna 79 
                    + v+Ga+G lG+ ++++la++g+ v+ + re                   e dl++  +++e +++   d+v+n+   t   k    +   + v +
     KHJ34911.1  53 VTVFGATGFLGRYIVNRLARQGCTVIVPFREemakrhlqvsgdlgriiflEYDLRNTPSLEESVRH--SDAVYNLVGRTYPTK----NFDLEDVHV 142
                    789*************************9999*********************************9..788999998888765....445567999 PP

                    HHHHHHHHHHHHCT-.EEEEEEEGGGS-S-TTS-B-TTS----SSHHHHHHHHHHHHHHHH-SSEEEEEE-SEESSSSS-HHHHHHHHHHH-SEEE CS
  RmlD_sub_bind  80 eavealAeaaaavga.lLihvStDyVFdGekkrpYeeddetsPlnvYGrtKlaGEqavlaagkkalivRtswvygekgknfvktmlrlakereelk 174
                    e+ e++Aea+a++++  LihvS++              d++s   +Y  tK +GE + ++  ++++ivR + ++g +++ +   + +la   + l+
     KHJ34911.1 143 EGIERIAEATAKYDVdRLIHVSSYN------------ADPKSSSEFY-STKGRGEMVARKIFPETTIVRPAPMFGFEDQ-L---LHKLAGVTNFLT 221
                    **************956*****963............3444444445.6899999999999999999999999986443.2...333444444454 PP

                    EESS-EE.--EEHHHHHHHHHHHHHHCHH.GGG-EEEE---BS-EEHHHHHHHHHHHHCHTT CS
  RmlD_sub_bind 175 vvaDqlg.sPTsardlAevllqllekaaeekelagvyHlanegetswlefArailkeagads 235
                      + q +  P ++ d+ e+l ++l        + ++y l + ++ s++e+A+ + ke+ +++
     KHJ34911.1 222 SNNMQERyWPVHVIDVGEALEKMLFDDST---AEQTYELYGPKNYSTAEIAQLVDKEIVKHR 280
                    44444331477777777776666555443...456677777777777777777776666655 PP

>> NAD_binding_4  Male sterility protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1   4.9e-06    0.0098       3      35 ..      57      87 ..      55      99 .. 0.85
   2 !    5.4   0.0    0.0044       8.7      91     147 ..     116     176 ..     103     267 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 4.9e-06
                   -TTSHHHHHHHHHHHHHS-.TEEEEEE-SSSHH CS
  NAD_binding_4  3 GaTGFLGkvLlekLLrttpevkiyllvRaksge 35
                   GaTGFLG++++++L r+    ++++  R++  +
     KHJ34911.1 57 GATGFLGRYIVNRLARQGC--TVIVPFREEMAK 87
                   9**************9975..899998877554 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0044
                    EEE--SS-S.ST.TSSE....EHHHHHHHHHHHHHHHTSSS--.-EEEEEEGGGTTS-TTT- CS
  NAD_binding_4  91 iihsaAtvnfde.pyke....llrvNveGtrevlelakklkklkvllhvSTayvngeregev 147
                    + hs A +n+++ +y++    l +v veG++++ e  +k      l+hvS+  +++++++e+
     KHJ34911.1 116 VRHSDAVYNLVGrTYPTknfdLEDVHVEGIERIAEATAKYDVD-RLIHVSSYNADPKSSSEF 176
                    445555555554222222244899************9999888.9*****988887777654 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   3.6e-07   0.00073       2      72 ..      52     120 ..      51     140 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 3.6e-07
                 EEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHH CS
   adh_short   2 vvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegakalaiqvDvtdreevealvekav 72 
                 +v v Ga++ +Gr i+++la++G++v+v  r+ e +++ + ++  +  +++++++D+++  ++e+ v++  
  KHJ34911.1  52 TVTVFGATGFLGRYIVNRLARQGCTVIVPFRE-E-MAKRHLQVSGDLGRIIFLEYDLRNTPSLEESVRHSD 120
                 6899**********************994444.3.33344444444578**********999999988765 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0012       2.4       3      30 ..      53      80 ..      51     124 .. 0.81
   2 ?    1.1   0.0      0.17   3.3e+02     113     137 ..     142     166 ..     136     173 .. 0.91
   3 ?    3.0   0.0     0.041        82      84     126 ..     233     275 ..     214     279 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0012
                EEEETTTSHHHHHHHHHHHHHHS-EEEE CS
          KR  3 ylitGGlGgLGlelarwlaekgarhlvl 30
                + + G++G LG+ +++ la++g + +v 
  KHJ34911.1 53 VTVFGATGFLGRYIVNRLARQGCTVIVP 80
                6799******************988774 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.17
                 THHHHHHHHHTTTS--SEEEEEEEH CS
          KR 113 vkGawnLhelledesldffvlfSSi 137
                 v+G++ + e++++ ++d ++ +SS 
  KHJ34911.1 142 VEGIERIAEATAKYDVDRLIHVSSY 166
                 89**********************7 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.041
                 EEEE---------TTT--HHHHHHHHTTTTHHHHHHHHHTTTS CS
          KR  84 GvihaAgvlrdklleemtaedleqvlapKvkGawnLhellede 126
                  vi    +l++ l+++ tae+  +++ pK   +  + +l+ +e
  KHJ34911.1 233 HVIDVGEALEKMLFDDSTAEQTYELYGPKNYSTAEIAQLVDKE 275
                 488999999***********************99999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 2563.42
//
Query:       KHJ34912.1  [L=117]
Description: putative zinc finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      6e-09   36.0   1.9    1.1e-08   35.1   1.9    1.5  1  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
     0.0031   17.4   0.1     0.0056   16.6   0.1    1.4  1  Tna_leader   Tryptophanase operon leader peptide
  ------ inclusion threshold ------
      0.045   14.6   0.3        0.1   13.5   0.3    1.7  1  zf-C2H2_4    C2H2-type zinc finger


Domain annotation for each model (and alignments):
>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1   1.9   1.8e-12   1.1e-08       2      27 .]      50      75 ..      49      75 .. 0.98

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 1.8e-12
                 CBBTTTTBBBSSHHHHHCCTTSHHHH CS
  zf-C2H2_jaz  2 fYCvlCdKyFksenaldnHlkSKkHK 27
                 +YC++C+K+F+s+n+l  H k+ +HK
   KHJ34912.1 50 HYCIECAKWFESDNSLISHRKGSSHK 75
                 8************************9 PP

>> Tna_leader  Tryptophanase operon leader peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   9.3e-07    0.0056       4      23 ..      49      69 ..      48      70 .. 0.91

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 9.3e-07
                X----.-----SS-------- CS
  Tna_leader  4 LHiCv.tsKWFniDnKivDHR 23
                LH C+  +KWF  Dn ++ HR
  KHJ34912.1 49 LHYCIeCAKWFESDNSLISHR 69
                89**9458************9 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.3   1.7e-05       0.1       1      21 [.      50      70 ..      50      73 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.7e-05
   zf-C2H2_4  1 fkCpiCgksFsskkaLlrHlk 21
                ++C  C k+F s ++L +H k
  KHJ34912.1 50 HYCIECAKWFESDNSLISHRK 70
                68*****************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (117 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       606  (0.0338); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 925.11
//
Query:       KHJ34913.1  [L=563]
Description: putative anthranilate synthase component 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-90  302.1   0.0    6.9e-88  294.5   0.0    2.1  2  Chorismate_bind  chorismate binding enzyme
    8.2e-26   90.9   0.5    4.1e-21   75.7   0.0    3.2  3  Anth_synt_I_N    Anthranilate synthase component I, N termina


Domain annotation for each model (and alignments):
>> Chorismate_bind  chorismate binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.0    0.0012        11      15      82 ..      63     134 ..      54     150 .. 0.74
   2 !  294.5   0.0   7.7e-92   6.9e-88       2     258 .]     272     535 ..     271     535 .. 0.97

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0012
                      HHHTTS-SEEEEEEEEEECESS-B-HHHHHHHHHCTBSSSEEEEE......EETTEEEEEEESSEEEEEETTSE CS
  Chorismate_bind  15 eiragdlykvvlsrrlkaeleaavdplalyralrarnpapysfll......eledsellgaSPElllkveggrr 82 
                      ++++++  ++v+  r   +  a+++  ++y +l++  ++ +sfll      e +++ ++g+SP  +lk+ +g+ 
       KHJ34913.1  63 SLQRKNAANLVPIFREFSS--AHLNYSDAYLKLTNSLESDFSFLLesavneEKGRYVFMGTSPHKILKTGEGHG 134
                      4566666666655554444..688999******************7777654555889******9999876644 PP

  == domain 2  score: 294.5 bits;  conditional E-value: 7.7e-92
                      HCHHHHHHHHHHHHHHTTS-SEEEEEEEEEECESS-B-HHHHHHHHHCTBSSSEEEEEEETTEEEEEEESSEEEEEETTSEEEEECEEEEEEHS CS
  Chorismate_bind   2 redYaeavekvkeeiragdlykvvlsrrlkaeleaavdplalyralrarnpapysflleledsellgaSPElllkveggrrietepiaGTrarg 95 
                      ++ Y++ v+++k++i +g++ ++v+s+r+ ++  ++++p+++y+alra np+py f++++++++++gaSPEll+++e+g ri t+piaGT +r+
       KHJ34913.1 272 QKGYEKYVTTLKNHIIDGNIIQAVPSQRIAYP--TSLHPFNIYQALRAVNPSPYLFYIDCHEFQIVGASPELLVRKEAG-RILTHPIAGTVKRS 362
                      689*****************************..99*****************************************77.************** PP

                      SSHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCBSCCEEEEECCEEEEEETTEEEEEEEEEEEESTT--HHHHHHHCSS-CCCSEESHHH CS
  Chorismate_bind  96 ktpeedealeeelledeKeraEhlmivdlirndLgkvakpgsvkvpelfkverysevlhlvstiegelkedvslldllkalfPtgavtGaPkkr 189
                      +++ ed+ l e+l+++eK+ aEh+m+vdl+rnd+++v++p s +v++l++ve++s+v+hlvs+++g+l+++++ +d+++++fP+g+v+GaPk +
       KHJ34913.1 363 NDEIEDKLLGEQLQQSEKDVAEHVMLVDLARNDINRVCNPLSTRVDRLMTVEKFSHVQHLVSQVSGTLRKGKTRFDAFRSIFPAGTVSGAPKVK 456
                      ********************************************************************************************** PP

                      HHHHHHHHSSS--TTTTSEEEEEETTS-..........EEEEEE-SEEEEETTEEEEEEEEEEETT--HHHHHHHHHHH CS
  Chorismate_bind 190 ameiidelEearRgvYaGavgyldadge..........aelavvIRtavvkdkelrlgaGaGIvadSdpeaEyeEtlaK 258
                      ame+i+elE ++Rg+YaGavgy++ +            +++++++Rt++vkd+ ++l+aG+GIv dSdp +E+eEt++K
       KHJ34913.1 457 AMELIAELEGEKRGIYAGAVGYFGYNTVdaygnenegeMDTCIALRTMIVKDGFVYLQAGGGIVYDSDPTEEFEETMNK 535
                      ***********************987655666677777**************************************998 PP

>> Anth_synt_I_N  Anthranilate synthase component I, N terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.7   0.0   4.5e-25   4.1e-21       6     138 ..      91     212 ..      85     216 .. 0.83
   2 ?   -0.3   0.0      0.13   1.1e+03      32      56 ..     331     363 ..     305     412 .. 0.65
   3 !   11.0   0.3   4.1e-05      0.37      90     108 ..     471     489 ..     425     513 .. 0.76

  Alignments for each domain:
  == domain 1  score: 75.7 bits;  conditional E-value: 4.5e-25
  Anth_synt_I_N   6 lsvylklaeeehkflLeSaeneggegrySfigldpflelkskngevevegpegeeleeeepldalrellerfrsaedseptelpfvgGlvGylgYD 101
                    l+++ +l  +  +flLeSa  ++++gry f+g++p+  lk+ +g          + e+ +pl  l+++l++ r a+++    +p++gG++Gy+gYD
     KHJ34913.1  91 LKLTNSLESD-FSFLLESAV-NEEKGRYVFMGTSPHKILKTGEG----------HGESVDPLPGLENVLTEKRVAQVPGLVLPPLTGGAIGYIGYD 174
                    4444555554.5*******7.6677**********555444444..........445556*************888888999************** PP

  Anth_synt_I_N 102 lvreie.klpksakddlnlpdarlilydtlivfDhker 138
                    +v+++e + ++  +d l++p+  ++++dt+++fD +++
     KHJ34913.1 175 CVKYFEpRTSRPLIDVLKVPESLFMFFDTVVAFDRLTD 212
                    ******999999**********************9876 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.13
  Anth_synt_I_N  32 rySfigldpflelkskngeveveg........p 56 
                    ++ ++g++p l ++ + g++ ++         +
     KHJ34913.1 331 EFQIVGASPELLVRKEAGRILTHPiagtvkrsN 363
                    588999999999988888887776444433330 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 4.1e-05
  Anth_synt_I_N  90 fvgGlvGylgYDlvreiek 108
                    ++ G+vGy+gY+ v+ + +
     KHJ34913.1 471 IYAGAVGYFGYNTVDAYGN 489
                    899***********99864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.28s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 3956.80
//
Query:       KHJ34914.1  [L=290]
Description: putative metallo-beta-lactamase domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-17   64.4   4.1    7.8e-16   58.7   4.1    2.2  1  Lactamase_B     Metallo-beta-lactamase superfamily
    1.3e-14   53.9   0.2    3.8e-14   52.4   0.0    1.9  2  BLACT_WH        Beta-lactamase associated winged helix domain
    1.9e-06   27.6   0.0    2.8e-06   27.0   0.0    1.3  1  Lactamase_B_2   Beta-lactamase superfamily domain
     0.0089   15.5   0.0      0.017   14.5   0.0    1.5  1  Lactamase_B_6   Metallo-beta-lactamase superfamily domain
  ------ inclusion threshold ------
      0.086   12.7   0.1       0.15   12.0   0.1    1.4  1  Lactamase_B_3   Beta-lactamase superfamily domain
       0.13   12.3   0.1       0.45   10.6   0.1    1.7  2  Cnd1            non-SMC mitotic condensation complex subunit 
       0.15   12.1   0.0       0.26   11.4   0.0    1.3  1  Ribosomal_L18A  Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A


Domain annotation for each model (and alignments):
>> Lactamase_B  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.7   4.1   3.1e-19   7.8e-16       4     197 .]      32     187 ..      29     187 .. 0.93

  Alignments for each domain:
  == domain 1  score: 58.7 bits;  conditional E-value: 3.1e-19
                  CSSEEEEEEETTCEEEES--SCHHHHHHHHHHHHHTSGGGGEEEEE-SBSSHHHHTTGGGCTTHHCCEETCCEHHHHCCHCHHHHHHHHHCCHHTTCH CS
  Lactamase_B   4 dpvnsyliegdggviLiDtGtsteaaraalelaalglkpkdvdavilTHlHlDHiGglgglveatdvpvgavaeeapalfmeeaddaasrkglllagv 101
                   ++n+y+i ++   iLiDtG++ + + +  +   l  +   ++ v++TH+H+DH+Ggl++l e +++++++  + +   f+                 
   KHJ34914.1  32 QGSNTYIIGTGFLRILIDTGVGRRIWIEN-IQNVLNTENATISQVVITHWHHDHVGGLKHLLEIAPYATIYKNKPETGQFGIQD-------------- 114
                  689*********************99997.488899*******************************99998888877777777.............. PP

                  CGCCEEEEETTTEECCCTEEEEEHECTTSTSCCEEEEEETTCCEEEECTTTSSHHCCCCCC.TTCEEE-SHCHHHHHHHHHHHHHHHCHSEEEESS CS
  Lactamase_B 102 sadkpdvdeeeldgnaggrralyvtggpghghghgvveygggkvlftGDallagetgridltlrgaevrdpsdaekyldsllklaglkaevlvpgH 197
                             ++ +++++++l++  +pgh+++h  + +++++ +ftGD +l   +g++++           d   yl+sl+kl+gl   +++pgH
   KHJ34914.1 115 -----------GQKFEAEGVSLKALLCPGHTNDHTAFILQEENAIFTGDSIL--GHGTTGF----------EDLLTYLSSLDKLRGLCRGRIYPGH 187
                  ...........999**************************************..7777777..........779*********************9 PP

>> BLACT_WH  Beta-lactamase associated winged helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0         4     1e+04       8      15 ..      99     106 ..      98     106 .. 0.79
   2 !   52.4   0.0   1.5e-17   3.8e-14       1      47 []     236     282 ..     236     282 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 4
    BLACT_WH   8 viYkdvpe 15 
                 +iYk+ pe
  KHJ34914.1  99 TIYKNKPE 106
                 8***9876 PP

  == domain 2  score: 52.4 bits;  conditional E-value: 1.5e-17
    BLACT_WH   1 TveelVkviYkdvpeslhpaAergvlahLeKLeeeGkVkregdkgkW 47 
                 +++e+V+++Y d++++l++ A+r v+ +L+KLe+eGkV++ g +g+W
  KHJ34914.1 236 SSMEIVSTLYGDIADELRLSAQRIVQEILKKLEQEGKVVEIGRTGSW 282
                 69*****************************************9999 PP

>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.0   0.0   1.1e-09   2.8e-06       2      65 ..      45     106 ..      44     141 .. 0.79

  Alignments for each domain:
  == domain 1  score: 27.0 bits;  conditional E-value: 1.1e-09
                    EEEES--TT...HHHHHTCGGS--SSS--..SEEEEE-SS--HHHHGGGGCCCCC--EEEEEE.EEHH CS
  Lactamase_B_2   2 riLiDagpd...lrqqalralqPvelrdelppidaVllthaHyDHlaglltlrelrpkklply.apkg 65 
                    riLiD+g +   + ++ +    +v l  e + i  V++th H DH+ gl +l e++p  +++y  +++
     KHJ34914.1  45 RILIDTGVGrriWIENIQ----NV-LNTENATISQVVITHWHHDHVGGLKHLLEIAPY-ATIYkNKPE 106
                    8********444333322....33.3455689**********************8885.677744455 PP

>> Lactamase_B_6  Metallo-beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   6.8e-06     0.017       7      57 ..      44      93 ..      38     108 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 6.8e-06
  Lactamase_B_6  7 vkiLlDvGwdeskvslesalkelekviptvdliLLshatlehlGayallya 57
                   ++iL+D G+    + +e++ + l++   t++ ++++h   +h+G++ +l+ 
     KHJ34914.1 44 LRILIDTGVGRR-IWIENIQNVLNTENATISQVVITHWHHDHVGGLKHLLE 93
                   69*******985.88998888899999*******************99975 PP

>> Lactamase_B_3  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   5.8e-05      0.15       3      80 ..      30     127 ..      28     160 .. 0.63

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 5.8e-05
  Lactamase_B_3   3 twlghnsflletagarilvDPf........kanlgyeppaeeaDlvlisqaledHahletlkql..............aenvkvleegeslevggl 76 
                    t  g+n++ + t+  ril+D +        + +  ++ ++ ++  v+i++ +  H h+  lk l              ++    +++g+++e++g+
     KHJ34914.1  30 TLQGSNTYIIGTGFLRILIDTGvgrriwieNIQNVLNTENATISQVVITHWH--HDHVGGLKHLleiapyatiyknkpETGQFGIQDGQKFEAEGV 123
                    5669999999999999999988666666532234455556888888999988..666677777666555555544443222333444555666555 PP

  Lactamase_B_3  77 eira 80 
                    +++a
     KHJ34914.1 124 SLKA 127
                    5554 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.95   2.4e+03      59      79 ..      57      77 ..      39      81 .. 0.80
   2 ?   10.6   0.1   0.00017      0.45      94     149 ..     215     271 ..     192     279 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.95
        Cnd1 59 flselaklleDenprVvanal 79
                 ++++++ l+ en+++++ ++
  KHJ34914.1 57 WIENIQNVLNTENATISQVVI 77
                578899999999999998765 PP

  == domain 2  score: 10.6 bits;  conditional E-value: 0.00017
        Cnd1  94 ynllpdiisklsdalnecsewgqitilefLlsyipkdkq.eaeslveklcprlqhan 149
                 + + ++  s+ls++ +e + w+ ++i+++L   i+++ +  a+ +v+ + ++l+++ 
  KHJ34914.1 215 VLSSSKFSSNLSNHKKENHDWSSMEIVSTLYGDIADELRlSAQRIVQEILKKLEQEG 271
                 344577899**********************99988866599********9998875 PP

>> Ribosomal_L18A  Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0    0.0001      0.26      56     115 ..     200     259 ..     193     264 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0001
                     .......................TEEEEEEEEEEESSHHHHHHHHHHHHHHHS---GGGE CS
  Ribosomal_L18A  56 kkieekkptkvknygiwlrydsrsgthnfykeyrdlteegaveqvYselgsrhrakrssI 115
                     + i+ +k+++ +  g+++  + +s+  n  ke +d +  ++v+++Y +++ + r+ +++I
      KHJ34914.1 200 EYINHRKERENQVIGVLSSSKFSSNLSNHKKENHDWSSMEIVSTLYGDIADELRLSAQRI 259
                     55778888888999****************************************999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       652  (0.0363657); expected 358.6 (0.02)
Passed bias filter:                      565  (0.0315132); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2205.77
//
Query:       KHJ34915.1  [L=622]
Description: putative rhomboid protein 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   8.7e-168  559.4   8.5     1e-167  559.1   8.5    1.1  1  Gaa1           Gaa1-like, GPI transamidase component
  ------ inclusion threshold ------
      0.083   12.2   0.0       0.14   11.5   0.0    1.3  1  Sarcoglycan_1  Sarcoglycan complex subunit protein


Domain annotation for each model (and alignments):
>> Gaa1  Gaa1-like, GPI transamidase component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  559.1   8.5  1.2e-171    1e-167       1     496 [.     120     599 ..     120     601 .. 0.95

  Alignments for each domain:
  == domain 1  score: 559.1 bits;  conditional E-value: 1.2e-171
        Gaa1   1 kGeNvygilrAprgdstEAlVLvapwrtsdgeknlagvalalalaryfkrqslWaKDiIflvtedeqlglqaWleaYhdvetstlsvqsLdgkaGaiqa 99 
                 +GeN+y+il+Aprgd+tEA+VLv +w++ +ge n++g++l+l+laryfkr+slW+KDiIfl+t+++++g+qaW++aYhd++++  ++qsL++k+Ga+q+
  KHJ34915.1 120 SGENIYAILHAPRGDATEAIVLVGAWKNLEGEINRSGISLILTLARYFKRWSLWSKDIIFLITPESKAGPQAWVDAYHDTHKP-PKIQSLSLKSGALQG 217
                 69********************************************************************************9.9************** PP

        Gaa1 100 AlvlelpssedeidsldikyeGlNGqLPNlDLfnlavsiaskemgikvslqgtlskedsaesyesrlktllrgllkqalgvptgahglFlrYhidaiTl 198
                 A+v+++p+s++ ++s++i+y+G+NGqLPNlDL+n++vsia  +mgi v lq++++++d   +y++rl+t+lrg+l+q+lg+++gah++F++YhidaiT+
  KHJ34915.1 218 AVVIDYPFSHR-FESIHIVYDGINGQLPNLDLINTVVSIAGIQMGIGVCLQKMWRHSD---NYKDRLQTILRGMLNQGLGHASGAHSSFIPYHIDAITI 312
                 ***********.**********************************************...************************************** PP

        Gaa1 199 kakgkkrsgkeditqlGrviEgvfRslNNLLErlHqSFFfYlLlstsrFvSIGtYlpsavllaasllikalalwlelsksqekeesekaeeeekkes.. 295
                 +  g   +g++d++++GrviE++fRslNNL E+lHqSFF+YlL++++rFvSIGtYlp a+l+a++++i+a+ lw++  + + ++++   ++++++++  
  KHJ34915.1 313 QPLG---EGWQDEMAIGRVIESTFRSLNNLIEHLHQSFFLYLLMQANRFVSIGTYLPGAMLIALNFTIMAVFLWIKSGSLNLESRAIRIKKNNESQTtq 408
                 ****...9*******************************************************************776666666555444442222246 PP

        Gaa1 296 ..............eleerklllvlllvlvlhllgllllllptkltqleenlkteealllalllltvlllllplllslllkrllkakeqkvellksvsl 380
                                + er+l l+l+lv+++++lg++ l+l +k+         +e+++ ++l++++ + +lp+l+s+ l r+++++ q+++l+k++sl
  KHJ34915.1 409 nqklsmtavnaeklCIRERELFLPLTLVVGIQFLGAMPLYLFNKT--------PKELFSRMFLIFVIFNTALPFLISFSLDRYFSPSIQQYQLIKCFSL 499
                 7899********9988999****************9999888883........45899999***********************9999*********** PP

        Gaa1 381 lllglllsalallNfSLallvallavPltfiarpkaeslrrllrllasvlllllsPlvvlllvllvlfkeleelkllleslqaalqlltealidwnvyg 479
                 l+lgl+ls+la+lNfSL++lv+ll +P++++++  +   ++ l+++  +l +ll P++++++ + +l  ++ e             +ltea+++wnv+ 
  KHJ34915.1 500 LFLGLFLSSLATLNFSLSFLVGLLSAPVAYTQPLPK---SSILSYILPLLFNLLAPTTIFFIGIRYLGLDIGE-------------VLTEAAFGWNVWW 582
                 *******************************99544...589******************9988888888888.............************* PP

        Gaa1 480 swtfvvvalvwlPlWll 496
                 + t+vvv++vw+P+Wl+
  KHJ34915.1 583 MNTQVVVWCVWWPAWLI 599
                 ***************97 PP

>> Sarcoglycan_1  Sarcoglycan complex subunit protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   1.6e-05      0.14     193     246 ..     374     425 ..     368     432 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 1.6e-05
  Sarcoglycan_1 193 eieatslkdikLkssnGsivLdakgiflknlr.lpisssspsssasltqyklCvC 246
                    +++++    + L ++ Gs++L+++ i++k+++  ++ ++++ s ++++  klC+ 
     KHJ34915.1 374 NFTIM---AVFLWIKSGSLNLESRAIRIKKNNeSQTTQNQKLSMTAVNAEKLCIR 425
                    55555...899********************643333355666677799999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (622 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       733  (0.0408835); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 4568.16
//
Query:       KHJ34916.1  [L=449]
Description: putative phosphatidylinositol transfer protein csr1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.7e-44  150.3   0.2    1.7e-43  148.1   0.0    2.0  2  CRAL_TRIO    CRAL/TRIO domain
    1.8e-12   47.2   0.2    1.8e-12   47.2   0.2    3.2  4  CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
    4.8e-07   30.0   0.0    1.1e-06   28.9   0.0    1.5  1  CRAL_TRIO_2  Divergent CRAL/TRIO domain


Domain annotation for each model (and alignments):
>> CRAL_TRIO  CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0      0.15     9e+02      76     102 ..      85     110 ..      77     151 .. 0.76
   2 !  148.1   0.0   2.8e-47   1.7e-43       5     159 .]     191     337 ..     188     337 .. 0.95

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.15
   CRAL_TRIO  76 kmlwkpisllkkilkilqdnyperlgk 102
                   ++k ++++k + + + +  pe+l+ 
  KHJ34916.1  85 ETDDK-FGQMKLFNEAMANMTPETLKM 110
                 44422.777777777788888877764 PP

  == domain 2  score: 148.1 bits;  conditional E-value: 2.8e-47
   CRAL_TRIO   5 eggkvgihgrDkegrpvlylrlgrfdpkklsleelvralvlvlerllkeleedgqvegvtvviDlkglslskmlwkpisllkkilkilqdnyperlgki 103
                 + gk ++hg Dk++rp++++r++++   ++s+e l r++v+++e++  ++    +v+++ vv+D++g+s+++m+   +  +k+++k++++nype+lg i
  KHJ34916.1 191 RLGKSFLHGVDKKDRPLCLVRVRQHRIGEQSEESLERYTVFLIETAR-MVLS-SSVDTASVVFDMTGFSMANMD---YTPVKFMIKCFEANYPECLGVI 284
                 67999***************************************999.5555.6********************...********************** PP

   CRAL_TRIO 104 livnaPklfkfafklvkpfldektreKikfvspsnteatlekyidpeqlpkelGGt 159
                 l+++aP++f+ ++k+++++ld+++++K++f+++    +++e+yi+++q+ kelGG+
  KHJ34916.1 285 LVHKAPWVFQGIWKIIRGWLDPVVASKVQFTNTI---EEMEEYINRSQIVKELGGD 337
                 *******************************664...57****************6 PP

>> CRAL_TRIO_N  CRAL/TRIO, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.1       2.8   1.7e+04      13      25 ..      18      28 ..      15      31 .. 0.59
   2 !   47.2   0.2     3e-16   1.8e-12       6      53 ..      97     144 ..      70     145 .. 0.90
   3 ?    0.6   0.1      0.11   6.7e+02      11      29 ..     339     378 ..     314     383 .. 0.75
   4 ?   -2.4   0.4      0.98   5.9e+03      37      42 ..     414     419 ..     414     420 .. 0.85

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 2.8
  CRAL_TRIO_N 13 eyklteeekfW.lt 25
                 e+k    +++W lt
   KHJ34916.1 18 EEK---LKELWaLT 28
                 444...45677776 PP

  == domain 2  score: 47.2 bits;  conditional E-value: 3e-16
  CRAL_TRIO_N   6 lahlqeseyklteeekfW.ltredhddaclLRfLRArkwdvekAikrLe 53 
                   +++++ +++ t   +fW + ++d++da+lLRfLRAr+wdvekA  +++
   KHJ34916.1  97 NEAMANMTPE-TLKMSFWsMVKHDNPDALLLRFLRARRWDVEKALVMMI 144
                  4566777777.88999*****************************9986 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.11
  CRAL_TRIO_N  11 eseyk.....................lteeekfWltredh 29 
                  +++y+                     lte+ek+   +ed+
   KHJ34916.1 339 DWDYQyvepvpgendimndtdgrdklLTEREKIIKDYEDA 378
                  4455577777777777777888888899***999999865 PP

  == domain 4  score: -2.4 bits;  conditional E-value: 0.98
  CRAL_TRIO_N  37 fLRArk 42 
                  +LRAr 
   KHJ34916.1 414 YLRART 419
                  9***95 PP

>> CRAL_TRIO_2  Divergent CRAL/TRIO domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.0   1.8e-10   1.1e-06      13     129 ..     219     335 ..     205     345 .. 0.84

  Alignments for each domain:
  == domain 1  score: 28.9 bits;  conditional E-value: 1.8e-10
  CRAL_TRIO_2  13 lsskadldkllryvlhtladkivgke..yvlVyfhtglssenkpslswlkkvystlprrykknlkklyivhpstfvktllktvlsafvsskfrkkvey 108
                   +s+++l+++  ++++t  + ++++    ++V+++tg+s   ++++  +k ++++++ +y++ l  + ++ + + ++ +   + + ++ + +  kv +
   KHJ34916.1 219 EQSEESLERYTVFLIETARMVLSSSVdtASVVFDMTGFSM-ANMDYTPVKFMIKCFEANYPECLGVILVHKAPWVFQGIW-KIIRGWLDPVVASKVQF 314
                  56778889999999999955555555889*********97.*********************998777766666666666.9999999********** PP

  CRAL_TRIO_2 109 vsrleeLarkidrtqllkslP 129
                   +++ee+ ++i+r q+ k+l+
   KHJ34916.1 315 TNTIEEMEEYINRSQIVKELG 335
                  ****************99998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (449 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       846  (0.0471861); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3297.96
//
Query:       KHJ34917.1  [L=374]
Description: putative 3 exoribonuclease family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.4e-12   45.9   0.0    1.6e-11   44.8   0.0    1.6  1  RNase_PH  3' exoribonuclease family, domain 1


Domain annotation for each model (and alignments):
>> RNase_PH  3' exoribonuclease family, domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.0   8.9e-16   1.6e-11       1     132 []      38     201 ..      38     201 .. 0.74

  Alignments for each domain:
  == domain 1  score: 44.8 bits;  conditional E-value: 8.9e-16
                 EEEEEEEEESSSSTTSEEEEEEECC.EEEEEEEEEEEEE....E-TCCG--CCEEEECCCCECCCCEC-C....................S...HHHH. CS
    RNase_PH   1 elRslsietgvlsqanGSaylelGd.tkvlasvtgpiee....rpseerddaegaldveveyapfasger.................rregrpsdeei. 76 
                 ++R+l +etg+ls  nGSa++ + d  + +++v+++ie+    +   +   ++ + d+++e  +++ +++                 +  g ++d ++ 
  KHJ34917.1  38 QFRPLVAETGILSGTNGSARICFADgSEAIVGVKAEIEKclpmE---P---NGTVQDIDIEKLSLINTTNtrrkknakwnlwvevdvELPGYRDDDAMp 130
                 69*********************999***********9964331...2...121233333333222222222334445555555544323446666666 PP

                 .HHHHHHHHHHCCTC-C......CGCCTCEEEEEEEEEECCC........S-CHHHCHHHHHHHHHCTCEE CS
    RNase_PH  77 .elsrlleralrpsill......ekkpkstididitvlssdg........gslldalinaaslALadagip 132
                  +l+++l++al++ +        +++ ++++++d++  +s +        + +l +l++a++lAL+++++p
  KHJ34917.1 131 vLLASILTEALLADGQQpaglhiNRRFHWKLYLDVRSRNSGQilllsqplSYPLPLLSLASHLALLSTRLP 201
                 6***********999944555559999*************88***************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       284  (0.0158403); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2801.65
//
Query:       KHJ34918.1  [L=190]
Description: putative ran-interacting mog1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.5e-38  131.5   0.0    3.1e-38  131.3   0.0    1.1  1  Mog1      Ran-interacting Mog1 protein
  ------ inclusion threshold ------
      0.037   13.6   0.0      0.049   13.2   0.0    1.2  1  LptC      Lipopolysaccharide-assembly, LptC-related


Domain annotation for each model (and alignments):
>> Mog1  Ran-interacting Mog1 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.3   0.0   3.4e-42   3.1e-38       2     138 .]       8     144 ..       7     144 .. 0.86

  Alignments for each domain:
  == domain 1  score: 131.3 bits;  conditional E-value: 3.4e-42
                 E-TTTSSEEE--TT-EEGGGTS---TTEEEEEETTTTEEEEEE--B--TT.....--THHHHHHHHHHHTTTSS--..--EEEEEEE--SS----SEEE CS
        Mog1   2 eLyGGaitvelPkgflDvSklRqvPDnQEVfvdkssdesiIvellervee.....ksdeealklhledlaeendase.eseveevekleakkeeetsai 94 
                 +LyGGaitvelP+ f+DvS++RqvPD+QEVf+d+s+ +siI++++erv +     + d  al+ hled++e++  +  +++ ++++    k +e ++a+
  KHJ34918.1   8 SLYGGAITVELPSFFVDVSDFRQVPDHQEVFLDNSGFTSIIFDITERVGSdstgpDVDCAALTAHLEDITEKETVQVwNTNSTQFS----KLPEGIPAY 102
                 7************************************************97777666777************66653444444444....56999**** PP

                 EEEEE-B---TTS--..--B-EEEEEEEEETTTTEEEEEEEEE- CS
        Mog1  95 lligtqkvakfnkeeekeetvaillaliRlkevetDvlitvnvP 138
                 +li+t   + +n+  ++++++aill+l+Rl++++tD+lit+nvP
  KHJ34918.1 103 TLIATPIESSKNP--KNSKFTAILLTLVRLEKESTDILITINVP 144
                 ****994444444..4478************************9 PP

>> LptC  Lipopolysaccharide-assembly, LptC-related
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   5.5e-06     0.049      30      86 ..      77     135 ..      64     154 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 5.5e-06
                 XXXXXXXXXXXXXXXXX..XXXXX-EEEEEEEEEEETTTTEEEEESEEEEEE-TTSEEE CS
        LptC  30 ksepdyvaenfettqyd..edGklqyrltadklehypdddqteftnPvliiydegtqsw 86 
                 +++ + ++ n+++tq++  ++G ++y+l+a+ +e  ++ + ++ft++ l++ + +++s+
  KHJ34918.1  77 TEKETVQVWNTNSTQFSklPEGIPAYTLIATPIESSKNPKNSKFTAILLTLVRLEKEST 135
                 444455555666666662278*****************************998887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       451  (0.0251548); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1472.37
//
Query:       KHJ34919.1  [L=179]
Description: putative rhomboid protein 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-08   34.1   7.4    2.9e-08   33.9   7.4    1.1  1  Rhomboid  Rhomboid family


Domain annotation for each model (and alignments):
>> Rhomboid  Rhomboid family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   7.4   1.6e-12   2.9e-08      36     147 ..       3     116 ..       1     119 [. 0.78

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 1.6e-12
                 HHHHHHHHHHHHHHHHH.....HHHHHHHHHHHHH-S...-EESSHHHHHHHHHHHHHHHHCCCCGS----HC...CCCCCCCCCCHHHCTSSSTTTHH CS
    Rhomboid  36 plerrlGslrflllyll.....sglagsllsllfsaesesplvGaSGaifgllgallvlvprnrkllrkliiallllllfillnlvlgllpraggvsnl 129
                 ++e ++G+l  ++l++       +l+  l+  ++ + s + ++GaS ++f+llg+ +v+  r + ++    +++ +l++ i+l l+++++  +   s+l
  KHJ34919.1   3 RFEAKYGTLTTVALFFGpistfPALLYTLVERVILRMS-TSVLGASIWVFTLLGMEAVKTHRINPYFMIGTTPIPTLITPIILALFISVMVAN--TSFL 98 
                 68999999999999999855553444444444444443.39******************9999999888888877777777777888887776..8*** PP

                 HHHHHHHHHHHHHHHHCC CS
    Rhomboid 130 AHlgGllaGlllgllllr 147
                 +Hl+G+++G+ +g+  ++
  KHJ34919.1  99 GHLCGVAFGYGWGFGYFQ 116
                 **********99998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 1455.19
//
Query:       KHJ34920.1  [L=221]
Description: putative carbonic anhydrase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-44  151.7   0.0    2.4e-44  151.4   0.0    1.1  1  Pro_CA    Carbonic anhydrase


Domain annotation for each model (and alignments):
>> Pro_CA  Carbonic anhydrase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.4   0.0   1.3e-48   2.4e-44       1     156 []      44     196 ..      44     196 .. 0.96

  Alignments for each domain:
  == domain 1  score: 151.4 bits;  conditional E-value: 1.3e-48
                 EEEEEETTTTS-HHHHTTS-TTSEEEEEETTG---TT-HHHHHHHHHHHHTS--SEEEEEEETT-HHHHHHHSHHCCSTTSSHHHHHHHHHHHHHHHCH CS
      Pro_CA   1 alvigCsDSRvppelitdagpGdlFvvrnvgnlvppadssvlaaleyAvevlkvkhivVlGHskCGavkaalkaekseeeagaidkwlekirealekve 99 
                 +l+igC+DSRvp+++i++ +pG++Fv+rn++n+v p+d +++a++eyAve+lkv +i+ +GH++CG+ +aal+++      g id+w++++r+ ++ ++
  KHJ34920.1  44 ILWIGCADSRVPETTILGLEPGEVFVHRNIANIVAPSDINTMAVIEYAVEKLKVLDIILCGHTRCGGAEAALTDKC---VGGVIDHWITPLRTLRRCNA 139
                 59*********************************************************************99633...469************99999 PP

                 HHHHTTSSHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHTTS-EEEEEEEETTTTEE CS
      Pro_CA 100 eelesekekearerlleeenVaeqlenLlekpvvreavekgklkvhGlvydletGev 156
                 + le+++++ ++  +l+e+ V+  ++nLl++  vrea++++ l++hG++yd++tG++
  KHJ34920.1 140 SMLEAIEDPIQQGIKLSELGVEMGIHNLLNNYSVREAIKSRGLRIHGCLYDVATGRL 196
                 9999999999999999***************************************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (221 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       364  (0.0203023); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1633.46
//
Query:       KHJ34921.1  [L=209]
Description: hypothetical protein EV44_g1307 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.11   12.6   0.1         15    5.8   0.0    2.4  2  VirDNA-topo-I_N  Viral DNA topoisomerase I, N-terminal


Domain annotation for each model (and alignments):
>> VirDNA-topo-I_N  Viral DNA topoisomerase I, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0   0.00086        15      45      57 ..      42      54 ..      41      55 .. 0.91
   2 ?    4.4   0.1    0.0024        43      23      38 ..      73      88 ..      68      97 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.00086
                     --HHHHTTSEEEE CS
  VirDNA-topo-I_N 45 qtleealngLIFv 57
                     +++ee++++LIF+
       KHJ34921.1 42 KKVEESKRRLIFI 54
                     678*********8 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.0024
                     THHHHHHH----TT-E CS
  VirDNA-topo-I_N 23 ptYeilkkvkiPkhLt 38
                     +tY  l ++k+P+hL 
       KHJ34921.1 73 ATYMKLLRMKVPAHLG 88
                     58888999******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       697  (0.0388756); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 1623.35
//
Query:       KHJ34922.1  [L=260]
Description: putative oxoglutarate iron-dependent oxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-10   41.3   0.0    4.3e-10   40.4   0.0    1.4  1  2OG-FeII_Oxy_3  2OG-Fe(II) oxygenase superfamily


Domain annotation for each model (and alignments):
>> 2OG-FeII_Oxy_3  2OG-Fe(II) oxygenase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   0.0   2.4e-14   4.3e-10       2      91 ..     144     252 ..     143     254 .. 0.86

  Alignments for each domain:
  == domain 1  score: 40.4 bits;  conditional E-value: 2.4e-14
                     EEEEE-TT-EEEEE-SS--........--TT.-.EEEEEEEEE.....ET-B--EEE....................---TT-EEEEE-..B-T. CS
  2OG-FeII_Oxy_3   2 qvlrygegqeykpHvDnfe........keegsgqrrltvllyLne.keseeGGelelyekdk..........eavkikpkkgrlvlFesdellp. 76 
                      ++ryg+gq++++H+D ++           +s + ++t+llyL++ ++  +GGe ++y++ +          e+  +k + g+l+l + ++    
      KHJ34922.1 144 RIYRYGKGQFFDKHYDESNmvslktdtAITTSANTTWTFLLYLTSaSTGCKGGETVFYPNVDlkkgirdlalEKLVVKLETGMLLLHKHGKDCIl 238
                     5799************999*****9994455578*********986666********9999999999999999999999********98544337 PP

                     EEE--B.-SS-EEEE CS
  2OG-FeII_Oxy_3  77 HevlpvtkggeRlsl 91 
                     He+++v  gge++++
      KHJ34922.1 239 HEGKEV-LGGEKWVI 252
                     ******.567***98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.36
# Mc/sec: 2163.82
//
Query:       KHJ34923.1  [L=188]
Description: hypothetical protein EV44_g2740 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       762  (0.042501); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1411.94
//
Query:       KHJ34924.1  [L=838]
Description: hypothetical protein EV44_g0128 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (838 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1746  (0.0973841); expected 358.6 (0.02)
Passed bias filter:                      522  (0.0291148); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.72u 0.29s 00:00:01.01 Elapsed: 00:00:00.41
# Mc/sec: 6096.91
//
Query:       KHJ34925.1  [L=707]
Description: putative rna-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.6e-13   48.8   0.2    4.6e-06   26.4   0.1    2.8  3  RRM_1        RNA recognition motif. (a.k.a. RRM, RBD, or RNP 
    3.6e-09   36.4   1.4    9.9e-09   35.0   1.4    1.8  1  G-patch      G-patch domain
    1.9e-08   33.5   5.2    3.7e-08   32.5   5.2    1.4  1  zf-RanBP     Zn-finger in Ran binding protein and others
    2.5e-06   27.4   0.8      7e-06   26.0   0.8    1.7  1  G-patch_2    G-patch domain
  ------ inclusion threshold ------
      0.018   15.3   1.4      0.051   13.9   1.4    1.8  1  zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.4   0.1   1.3e-09   4.6e-06       2      59 ..     103     164 ..     102     171 .. 0.89
   2 ?   -3.3   0.0       2.4   8.5e+03       5      16 ..     274     285 ..     273     291 .. 0.85
   3 !   19.4   0.0     2e-07   0.00071      23      59 ..     325     362 ..     322     375 .. 0.88

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 1.3e-09
                 EEESETTTSSHHHHHHHHHT...TSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHH CS
       RRM_1   2 fVgnLppdvteeeLkelFsk...fGpiksiklvrd.etgkskgfafVeFeskedAekAleal 59 
                 ++++Lp+d t+e++   +++   +++ +++++++d +tg+++gfaf +F   ++A++ l+ +
  KHJ34925.1 103 ILEGLPFDFTQEDIFNELQNdkkVEGLEEVRVIKDkRTGQPRGFAFAQFVGISEARRFLQDF 164
                 6789***********999744449999*****************************999976 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.4
                 SETTTSSHHHHH CS
       RRM_1   5 nLppdvteeeLk 16 
                 +L p vtee L 
  KHJ34925.1 274 GLEPGVTEELLA 285
                 7999*****996 PP

  == domain 3  score: 19.4 bits;  conditional E-value: 2e-07
                 SCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHH CS
       RRM_1  23 Gpiksiklvrd.etgkskgfafVeFeskedAekAleal 59 
                 G+++++ lvrd +t+ s +++f eF s edA++A+ ++
  KHJ34925.1 325 GSMRRVLLVRDrKTNDSWRYGFAEFSSVEDAQAAMIKY 362
                 88999*****************************9754 PP

>> G-patch  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   1.4   2.8e-12   9.9e-09       3      44 ..     626     667 ..     625     668 .. 0.97

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 2.8e-12
     G-patch   3 niGvkmLqkmGWkpGqGLGkkeqGiaePieakikkdraGlGa 44 
                 ++G+ +L kmGW  G+GLG  + G++e i+++   ++ GlGa
  KHJ34925.1 626 SKGAALLGKMGWTAGEGLGVRGTGRTEVINTDLYAQGVGLGA 667
                 79***************************************9 PP

>> zf-RanBP  Zn-finger in Ran binding protein and others
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.5   5.2     1e-11   3.7e-08       2      28 ..     205     231 ..     205     232 .. 0.96

  Alignments for each domain:
  == domain 1  score: 32.5 bits;  conditional E-value: 1e-11
                 SSSEE-SSS--EEESSSSB-TTT--BT CS
    zf-RanBP   2 egdWdCskClvqNfawstkCvaCqapk 28 
                 e+dW+C++C++ Nf+++t C++C ap+
  KHJ34925.1 205 EDDWKCDVCCLPNFSHRTLCFRCNAPR 231
                 68************************8 PP

>> G-patch_2  G-patch domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.8   1.9e-09     7e-06       4      57 ..     614     667 ..     611     670 .. 0.92

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 1.9e-09
   G-patch_2   4 asleeyeevPVeeFGaAlLrGMGWkegqgigknkkgrvkpeepkrRpgrlGLGa 57 
                 +++ee    PV + GaAlL  MGW++g+g g  ++gr++ +  +  +++ GLGa
  KHJ34925.1 614 KEAEEPLPTPVPSKGAALLGKMGWTAGEGLGVRGTGRTEVINTDLYAQGVGLGA 667
                 567788899********************************************9 PP

>> zf-C2H2_jaz  Zinc-finger double-stranded RNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   1.4   1.4e-05     0.051       4      22 ..     531     549 ..     531     555 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.4e-05
                  BTTTTBBBSSHHHHHCCTT CS
  zf-C2H2_jaz   4 CvlCdKyFksenaldnHlk 22 
                  C lC ++Fkse    +H++
   KHJ34925.1 531 CLLCRRQFKSEAEVHKHER 549
                  *****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (707 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       553  (0.0308439); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 5164.37
//
Query:       KHJ34926.1  [L=124]
Description: putative f-box domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
       0.04   12.8   0.0      0.049   12.5   0.0    1.1  1  Me-amine-dh_H  Methylamine dehydrogenase heavy chain (MADH)


Domain annotation for each model (and alignments):
>> Me-amine-dh_H  Methylamine dehydrogenase heavy chain (MADH)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.7e-06     0.049     160     202 ..      46      88 ..      39     104 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.7e-06
                    EEEE-TSSSS-EEEEEEE-S-TTS-B-S--EEETTTTEEEEEB CS
  Me-amine-dh_H 160 akvgfgaegkskikrtevfhkedeylinhpaysnksgrlvwpt 202
                    +++g  +  +s+i++ ++f   d++l+ +  y + s rlvw +
     KHJ34926.1  46 LELGCSHTAESDITPNDIFDAVDQFLLPDLRYLRVSSRLVWDS 88 
                    567778888999*****************************64 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       353  (0.0196888); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 921.72
//
Query:       KHJ34927.1  [L=425]
Description: putative c6 zinc finger domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.6e-08   33.1   9.9    8.6e-08   32.2   9.9    1.5  1  Zn_clus         Fungal Zn(2)-Cys(6) binuclear cluster domain
    3.2e-05   22.9   7.1    5.5e-05   22.1   7.1    1.5  1  Fungal_trans_2  Fungal specific transcription factor domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   9.9   9.6e-12   8.6e-08       2      39 ..      36      73 ..      35      74 .. 0.95

  Alignments for each domain:
  == domain 1  score: 32.2 bits;  conditional E-value: 9.6e-12
                S-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCCCE CS
     Zn_clus  2 aCdnCrkkKvKCdakkPaCsnCkklnleCtfysesskr 39
                +C +C++++vKCd+++P+C+ C k++l C+f +++ ++
  KHJ34927.1 36 GCLHCKQRRVKCDERHPVCGPCSKRQLLCSFLDQKNQN 73
                7******************************9999886 PP

>> Fungal_trans_2  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   7.1   6.2e-09   5.5e-05       2     131 ..     118     244 ..     117     352 .. 0.77

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 6.2e-09
  Fungal_trans_2   2 lldyyldnvapllspvpessnpfrkvllplalsnkallhallalsafhlqskgpkds..lereakrykslalkelqealaelsstlsrnekykdi 94 
                     ll+yy +++ ++l   p  +   +  + +la   ++l+ +ll l+a hl++     s  + r +++y++++l+++ + l++ +s+        ++
      KHJ34927.1 118 LLHYYSTETYKTLVSMPKDQITMQYHVPELAFLYPFLMDSLLTLTAQHLATVETHRSsdWIRISMQYQNRSLENFTRTLENINSDNC-----SAV 207
                     99***********************************************444444445689**************************.....555 PP

  Fungal_trans_2  95 LaaiLllcsieissgdvsdwrvhLeaatsliksrggs 131
                       + +l  +  i+s+++ d   + e+  +++ +r+++
      KHJ34927.1 208 ALCSMLISMTSIASSTNVDETLYSEWIYEFLGTRLLQ 244
                     5555777777799999988777777777777777666 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       950  (0.0529868); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.21s 00:00:00.73 Elapsed: 00:00:00.37
# Mc/sec: 3451.68
//
Query:       KHJ34928.1  [L=194]
Description: putative ppe family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (194 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1378  (0.0768587); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1377.53
//
Query:       KHJ34929.1  [L=233]
Description: hypothetical protein EV44_g3771 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (233 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1287  (0.0717831); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1730.72
//
Query:       KHJ34930.1  [L=551]
Description: putative glucose-6-phosphate isomerase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.1e-228  759.7   0.6   1.3e-228  759.5   0.6    1.0  1  PGI       Phosphoglucose isomerase


Domain annotation for each model (and alignments):
>> PGI  Phosphoglucose isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  759.5   0.6  7.1e-233  1.3e-228       1     486 []      56     541 ..      56     541 .. 0.99

  Alignments for each domain:
  == domain 1  score: 759.5 bits;  conditional E-value: 7.1e-233
                 E-TTSS--HHHHHHHHHHHHHTTHHHHHHHHHTT---BTTTTB---HHHHT-TT----EETTEESHHHHHHHHHHHHHHHHHHHTT-SB-TTS-B--EE CS
         PGI   1 dysknkvddeilealvklaeeaklkaarealfaGekinstenravlhvalrnrsnkpilvdGkdvvpevkevldkmkefsekvrsGewkGatgkaitdv 99 
                 d+skn ++++il++lv++a+eak+++ r+a+f+G+kin+te+ra lh+alrn sn+pilvdG+dv+p v++ ld+mkefse+vrsGe+kG tgk +t +
  KHJ34930.1  56 DFSKNLITEKILDTLVQVAREAKVEELRNAMFKGDKINFTEGRAALHTALRNVSNEPILVDGQDVMPGVRKELDHMKEFSEAVRSGEYKGFTGKPLTTI 154
                 9************************************************************************************************** PP

                 EEE--GGGTHHHHHHHHHTGGG-TT.-EEEEE--SSHHHHHHHHTT--GGGEEEEEE-SSS--HHHHHHHHHHHHHHHHHH--GGGGGGTEEEESS-HH CS
         PGI 100 vniGiGGsdlGPvlvtealkkeser.lkvafvsnvdgthiaevlkkldpettlfivasktfttaetllnaesakewllkalkedsavakhfvalstnae 197
                 +niGiGGsdlGPv+vtealk++  r ++++fvsn+dgth+ae+l++ +pettlf+vasktfttaet +na+sakew++ +++ ++ ++khfva+stn++
  KHJ34930.1 155 INIGIGGSDLGPVMVTEALKSYGLReQTLFFVSNIDGTHLAEALRDSNPETTLFLVASKTFTTAETTTNAKSAKEWFITKTEGKGDISKHFVAISTNES 253
                 **********************988799*********************************************************************** PP

                 HHHHHT--GGGEEE--TTS-GGG-TTSGGGHHHHHHH-HHHHHHHHHHHHHHHHHHHHS-GGG-HHHHHHHHHHHHHHTS---EEEEEES-GGGTTHHH CS
         PGI 198 kveefGideknmfefwdwvGGryslwsaiGlsvalsiGfenfeelleGaaaidkhfleaplekniPvllalvgvwyvnflgaeteailpydqylerlaa 296
                 +v +fGid+knmf f+ wvGGrys+ws iGlsva++iGfenf ++l+Ga+a+dkhfle+plekniP++ al++vwy++f+ga+t+ + p+dqyl+r++a
  KHJ34930.1 254 EVIKFGIDPKNMFGFESWVGGRYSVWSVIGLSVAINIGFENFYQFLRGAHAMDKHFLETPLEKNIPIIGALLSVWYSDFYGAQTHLVSPFDQYLHRFPA 352
                 *************************************************************************************************** PP

                 HHHHHHHHHH---BBTTS.-B-SS--S-EEE---TTTGGGTSHHHHHHSSS---EEEEEEEE-S-.GGGGHHHHHHHHHHHHHHHHHHH-B-HHHHHHH CS
         PGI 297 ylqqldmesnGksvtkdg.vlvdvetgeiifGeagtngqhafyqlihqGtkliPcdfiaavksqn.ieiadhhkillsnffaqtealmvGkseeevkke 393
                 ylqql+mesnGk v +++ ++++++tg i+fGe++tn+qh+fyql+hqGtkliP+dfi a++s+n i++++h+k+l snffaq+ealmvGk+e ++ +e
  KHJ34930.1 353 YLQQLSMESNGKAVARSTnNFLKYTTGAILFGEPATNAQHSFYQLLHQGTKLIPTDFILAAQSHNpIQNNVHQKMLASNFFAQAEALMVGKDEAQLIAE 451
                 ***************9875899*************************************************************************9998 PP

                 HHHTHHHHHGGGG-B-----EEEEEEEE--HHHHHHHHHHHHHHHHHHHHHHTB-TT--GGGHHHHHHHHHHHHHHSSS----SS-HHHHHHH CS
         PGI 394 lakakveklvphktfeGnrPsnsillekltpaelGalialyehkilvqGviwginsfdqwGvelGkelakkilkeleasekvsdfdsstngli 486
                     ++e+l+ hktf GnrP++sil++k+tpa+lGali +yeh ++++ +iw+in fdqwGvelGk+lakkil el+++e+  d+dsst  li
  KHJ34930.1 452 E---TPETLIKHKTFLGNRPTTSILADKITPATLGALIVYYEHLTFTEAAIWDINCFDQWGVELGKSLAKKILGELDEEEESRDHDSSTGNLI 541
                 8...789**********************************************************************************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (551 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       443  (0.0247086); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.22s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 4155.60
//
Query:       KHJ34931.1  [L=603]
Description: putative serine threonine-protein kinase gad8 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-70  237.7   0.0    1.8e-70  237.3   0.0    1.2  1  Pkinase        Protein kinase domain
    1.1e-34  119.9   0.0    1.6e-34  119.4   0.0    1.1  1  Pkinase_Tyr    Protein tyrosine kinase
    5.3e-09   36.6   0.2    1.2e-08   35.5   0.2    1.7  1  Pkinase_C      Protein kinase C terminal domain
    1.3e-06   27.7   0.1    1.9e-06   27.1   0.1    1.2  1  Haspin_kinase  Haspin like kinase domain
     0.0083   15.5   0.0      0.017   14.4   0.0    1.5  2  Kinase-like    Kinase-like
  ------ inclusion threshold ------
      0.017   15.4   0.0      0.036   14.3   0.0    1.5  1  C2             C2 domain
      0.025   14.2   0.2       0.23   11.1   0.1    2.1  2  FTA2           Kinetochore Sim4 complex subunit FTA2


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.3   0.0   7.1e-74   1.8e-70       1     264 []     257     514 ..     257     514 .. 0.95

  Alignments for each domain:
  == domain 1  score: 237.3 bits;  conditional E-value: 7.1e-74
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslsee 98 
                 +e l+ +G+GsfGkV+++++k+t++i+A+K+i+k ++ +++e  ++l+E ++l +++ p+iv l+ +f+++++lylvl +v+ggel+++l++++ ++ +
  KHJ34931.1 257 FELLKVVGKGSFGKVMQVKKKDTQRIYALKTIRKAHIISRSEvAHTLAERSVLSQINNPFIVPLKFTFQSPEKLYLVLAFVNGGELFHHLQKEQRFDIN 355
                 577899*********************************9999******************************************************** PP

                 HHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-S CS
     Pkinase  99 eakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkpp 196
                 + +++++++l +le lH  ++i+rDlKpeNiL+d +g++ ++DFGl+k   ++++ +++f+gt+eYlAPE+l +++y+k+vD+W+lGv+l+e+ltg pp
  KHJ34931.1 356 RSRFYTAELLCALECLHGFNVIYRDLKPENILLDYSGHIALCDFGLCKMEMKDEDrTNTFCGTPEYLAPELLLGQGYTKTVDWWTLGVLLFEMLTGLPP 454
                 ***********************************************975555555******************************************* PP

                 TTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTT...HHHHHTSGGG CS
     Pkinase 197 fsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRlt...aeellqhpyl 264
                 f++e+++e ++k+l +            +++p ++ ++++akdll+kll+++p +Rl+   a+e+++hp++
  KHJ34931.1 455 FYDENTNEMYRKILSE-----------PLHFPGQEIVPPSAKDLLTKLLNRKPDQRLGangASEIKAHPFF 514
                 **77777766666655...........6899**************************988899******98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.4   0.0   6.3e-38   1.6e-34       2     250 ..     258     500 ..     257     505 .. 0.91

  Alignments for each domain:
  == domain 1  score: 119.4 bits;  conditional E-value: 6.3e-38
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTS..SHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeea..teeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkek 97 
                  el k +G+G+fGkV++ + k    +++   a+Kt+++ +  +++e ++ l e ++++++++p iv l     + e+l++v+ +v+gG+L ++L+k+  
   KHJ34931.1 258 ELLKVVGKGSFGKVMQVKKK----DTQRIYALKTIRKAHiiSRSEVAHTLAERSVLSQINNPFIVPLKFTFQSPEKLYLVLAFVNGGELFHHLQKE-- 349
                  67899**********99888....888899*****765422677789999*********************************************8.. PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvll 195
                  +++++++   +++++ +++e L+  +++ rdl   N+Ll+ + ++ ++DfGL++  +kd++   +++     +++apE l  + +t+  D W  Gvll
   KHJ34931.1 350 QRFDINRSRFYTAELLCALECLHGFNVIYRDLKPENILLDYSGHIALCDFGLCKMEMKDEDR--TNTFCGTPEYLAPELLLGQGYTKTVDWWTLGVLL 445
                  9999999999********************************************88555544..344455679************************* PP

                  HHHHTTSSGTTTTSHHHHHHHHH.HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS- CS
  Pkinase_Tyr 196 wEiftlgespypglkneevlekl.kegkrlekpekcpeelyelmkkcweedpeeRp 250
                  +E++t g  p+ + +++e+++k+ +e  + +  e +p++ ++l++k ++++p++R 
   KHJ34931.1 446 FEMLT-GLPPFYDENTNEMYRKIlSEPLHFPGQEIVPPSAKDLLTKLLNRKPDQRL 500
                  *****.****9999999999888788999*************************95 PP

>> Pkinase_C  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.2   4.8e-12   1.2e-08       4      46 .]     538     576 ..     535     576 .. 0.96

  Alignments for each domain:
  == domain 1  score: 35.5 bits;  conditional E-value: 4.8e-12
   Pkinase_C   4 deDtsNFDpeFTeedprdtppddmpagspltssvqenFrGFtY 46 
                 ++Dt NFD eFT+e p+d+ +d    g  l++ +q++F G++Y
  KHJ34931.1 538 ALDTKNFDVEFTREAPTDSFVD----GPVLSQTMQQQFAGWSY 576
                 78********************....89**************9 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.1   7.6e-10   1.9e-06     166     261 ..     312     409 ..     245     420 .. 0.75

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 7.6e-10
  Haspin_kinase 166 llqdkvlkek........pdfyseqqlflvlllkdkGtdLeevklkswkqalsifwqivkiLyvaEtkfeFE..HRdLhldniLvdknlnvtlidl 251
                    +        +          f+s ++l+lvl + ++G+   +++ ++  ++++  + +++ L + E    F    RdL+ +niL+d ++++ l+d+
     KHJ34931.1 312 I--------NnpfivplkFTFQSPEKLYLVLAFVNGGELFHHLQKEQRFDINRSRFYTAELLCALECLHGFNviYRDLKPENILLDYSGHIALCDF 399
                    2........2444554447899999******************999999999999999********887776559********************* PP

  Haspin_kinase 252 klsRle.sseg 261
                     l+++e + ++
     KHJ34931.1 400 GLCKMEmK-DE 409
                    *****952.32 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.8   4.5e+03      19      45 ..     262     288 ..     259     306 .. 0.76
   2 !   14.4   0.0   6.8e-06     0.017     149     288 .]     360     499 ..     329     499 .. 0.70

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.8
  Kinase-like  19 llkkgdrsvvfevkdqetgeplavkvf 45 
                  +++kg +++v++vk + t+   a+k  
   KHJ34931.1 262 VVGKGSFGKVMQVKKKDTQRIYALKTI 288
                  778889999999999998887777765 PP

  == domain 2  score: 14.4 bits;  conditional E-value: 6.8e-06
  Kinase-like 149 lTlqlirlaanLqakglvhgkftvdnllldekgglmlggftaLvragtkvvlsevekgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwcl 246
                   T++l+     L+   ++  +++++n+lld  g + l +f+ L +   k     ++     pE l+     ++     +t  +d W+lG+  + +   
   KHJ34931.1 360 YTAELLCALECLHGFNVIYRDLKPENILLDYSGHIALCDFG-LCKMEMKDE-DRTNTFCGTPEYLAPELLLGQ----GYTKTVDWWTLGVLLFEMLTG 451
                  3556666668899999************************8.555555544.333333344666666555333....68889*************998 PP

  Kinase-like 247 klPl.tlateeakeew.....kfklckkipekvkaLlkkfLqlsqedR 288
                    P+ ++ t+e+  +      +f   + +p   k Ll k+L+++ ++R
   KHJ34931.1 452 LPPFyDENTNEMYRKIlseplHFPGQEIVPPSAKDLLTKLLNRKPDQR 499
                  888745666666655566664555555788888999999999887666 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   1.4e-05     0.036      19      91 ..     111     191 ..      93     201 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.4e-05
                 TSSCEEEEEEEEECEEEEEE-SCSSSSSSEE...EEEEEEEESCHTTSEEEEEEEEECS.......SSTEEEEEEEEEEGHHH CS
          C2  19 kgssdpyvkvsldgkqkakTrviknslnPvW...nekftfevaeleeakLeveVfdndr.......lskddfiGkveiplstl 91 
                 +++  py+ +++d+ q++   v  + +nP W   n +f+f+v+    ++L v+++ ++          +d f+G+++i+ + +
  KHJ34931.1 111 SSKYLPYALIDFDKLQVFVNAVSGTPENPLWageNTSFKFDVSR--VTELVVTLYLRNPaappgtgRAHDIFLGVARINPRFI 191
                 666779***************887779****9988999999999..99999999998888899874455559**999986655 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1     9e-05      0.23      19      58 ..     253     293 ..     243     318 .. 0.74
   2 ?    0.5   0.0      0.16     4e+02     177     204 ..     360     387 ..     344     401 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 9e-05
        FTA2  19 saekdiefleyLgkglhsiVlkvkirgk..eYALKlFrflea 58 
                 +  +d+e+l+++gkg  + V++vk ++   +YALK  r+ + 
  KHJ34931.1 253 KI-EDFELLKVVGKGSFGKVMQVKKKDTqrIYALKTIRKAHI 293
                 34.489*****************9987556*****8887744 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.16
        FTA2 177 qlpkllrdlkklhklgIvvrDlkeenyi 204
                 ++ +ll  l+ lh   ++ rDlk+en++
  KHJ34931.1 360 YTAELLCALECLHGFNVIYRDLKPENIL 387
                 577899999**************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (603 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       413  (0.0230353); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:01.13
# Mc/sec: 1615.19
//
Query:       KHJ34932.1  [L=802]
Description: putative spoc domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-27   96.8   0.0    1.9e-27   96.1   0.0    1.4  1  SPOC      SPOC domain
    1.5e-17   64.1   1.1    1.5e-17   64.1   1.1    2.3  2  TFIIS_M   Transcription factor S-II (TFIIS), central domain
    3.5e-09   36.4   8.5    7.2e-09   35.4   8.5    1.5  1  PHD       PHD-finger
  ------ inclusion threshold ------
      0.044   13.3   3.9      0.082   12.5   3.9    1.5  1  PHD_2     PHD-finger
      0.045   13.8   1.9       0.11   12.6   1.9    1.6  1  zf-CW     CW-type Zinc Finger


Domain annotation for each model (and alignments):
>> SPOC  SPOC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   96.1   0.0   5.2e-31   1.9e-27       5     150 ..     508     664 ..     504     665 .. 0.88

  Alignments for each domain:
  == domain 1  score: 96.1 bits;  conditional E-value: 5.2e-31
                 XXXX---EEEEEETTEEEEEEEEEE----------SE..........EEE-EEEEHHHHHHHHHH-S.....EEEEEEEEESSGGGHHHHHHHHHHHHT CS
        SPOC   5 sklpvvWqGalslksvssfqvqahllsgdrslvspsl..........LritqRlrldqvkkyldevsrritadllavalfpsdesdesgfaelvdYLks 93 
                  +  ++W+G++ + sv++f++ a+ ++g + ++ ++           L+i++R++ +++++yl++++ +  +dl++v+l+p+ e+ +++f++l+dY++s
  KHJ34932.1 508 LDPTIIWRGTVTMDSVANFPAVAKQIGGVDITKAMTCilwsdvlakdLKIAGRIDHEKANEYLCSLRYSPPTDLVIVNLSPTGEAHTQAFTDLYDYFQS 606
                 57889***********************9988542224444445555***********************77*************************** PP

                 TTEEEE.....EE-TTS-EEEEE-S.......STHHHHTS.......-----SSEEEEEEE CS
        SPOC  94 KqraGvvnlnksglnqngvlyifPpga....lcefaesllresapelekskddhLlivvvr 150
                 ++r+Gv  l ++g  + +++y++P+++    l++f+++l+ + +pe ++ ++  ++++v+r
  KHJ34932.1 607 RNRYGV--LTNKGIGNIRDTYLVPVPPspgkLPDFITNLEGHQIPE-SRPEPLIIIALVIR 664
                 ******..****************9999***99************9.77766666666665 PP

>> TFIIS_M  Transcription factor S-II (TFIIS), central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       2.8     1e+04      45      58 ..     192     205 ..     142     208 .. 0.60
   2 !   64.1   1.1   4.1e-21   1.5e-17       1     110 [.     228     345 ..     228     347 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 2.8
                 -----HHHHHHHHH CS
     TFIIS_M  45 kstdkkykqkvrsl 58 
                 ++t+k+ ++kvr++
  KHJ34932.1 192 NDTSKETQNKVRKI 205
                 44566677777766 PP

  == domain 2  score: 64.1 bits;  conditional E-value: 4.1e-21
                 -HHHHHHHHHHHHHTT---...-.............--THHHHHHHHHHHHHHHT------HHHHHHHHHHHHHS-TT-HHHHHTSSSS--STTTTS-- CS
     TFIIS_M   1 dkvRdkcrelLaealeedsseaee............eedveelaaeiEealfekekkstdkkykqkvrslvfNLkdkkNpeLrrrvlsgeispeklvkm 87 
                 d++R+ ++++L+++l + + +  +            e+ +e++a+++E+a+    ++    +y ++ r + +N+k  +N eL + +lsg++spe l++m
  KHJ34932.1 228 DSTRQGAAKMLLKSLLHSIPQVLKsgayelgpnetlESIAENFAVSVENAVLL--IHPDRAAYAKQSRAIASNMK--RNLELSEGLLSGTLSPEALATM 322
                 789****************5444466666777777789************877..3445689************6..********************** PP

                 -TTTSS-HHHHHHHHHHHHHHHH CS
     TFIIS_M  88 speElaseelkeereklekeale 110
                  ++++as+elk+e+e+++ +a +
  KHJ34932.1 323 CSDDMASKELKKENEEMKARADK 345
                 *****************998865 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.4   8.5     2e-12   7.2e-09       1      51 [.      49     100 ..      49     101 .. 0.91

  Alignments for each domain:
  == domain 1  score: 35.4 bits;  conditional E-value: 2e-12
                 SBTTTTS...TTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD   1 rCavCkk...ksdeeeelvqCdgCkrwfHqkClkppleseekpegewlCekCke 51 
                 rC vC++    +++++ ++ Cd+C+ w+H+ C++++   e++p+ +++CekC++
  KHJ34932.1  49 RC-VCGAvetGDNDQDPWIACDSCDAWQHNICMGISTYGEDVPD-QYFCEKCHP 100
                 69.****987667799*********************9999987.*******87 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   3.9   2.3e-05     0.082       2      35 ..      63      98 ..      62      99 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.3e-05
       PHD_2  2 npllsCdkCsvaVHasCYGvskesdgee..WlCrrC 35
                +p + Cd+C    H  C G+s+  + ++  + C++C
  KHJ34932.1 63 DPWIACDSCDAWQHNICMGISTYGEDVPdqYFCEKC 98
                6889*****************988877777****** PP

>> zf-CW  CW-type Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   1.9     3e-05      0.11       2      34 ..      65      99 ..      64     107 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3e-05
       zf-CW  2 wVqCdkClKWRr.lptev.dkselipekWvCsmnp 34
                w+ Cd+C  W   +  ++ +  e++p++++C++ +
  KHJ34932.1 65 WIACDSCDAWQHnICMGIsTYGEDVPDQYFCEKCH 99
                **********99999999999999********976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (802 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1303  (0.0726756); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.28s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 5594.19
//
Query:       KHJ34933.1  [L=217]
Description: putative coiled-coil domain-containing protein 16 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0071   16.2   3.0     0.0071   16.2   3.0    1.6  2  RNA_pol_Rpb1_6  RNA polymerase Rpb1, domain 6
  ------ inclusion threshold ------
      0.048   14.3   0.0      0.086   13.5   0.0    1.5  1  DUF4646         Domain of unknown function (DUF4646)


Domain annotation for each model (and alignments):
>> RNA_pol_Rpb1_6  RNA polymerase Rpb1, domain 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.2      0.32   2.9e+03      18      67 ..      11      57 ..       2      64 .. 0.55
   2 !   16.2   3.0   7.9e-07    0.0071      16      85 ..     120     187 ..     110     194 .. 0.79

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.32
                    HHHHHHHH---TTSSSSS--TTTSSSHH..HHTT-TTHHHHHHHHHHHHH CS
  RNA_pol_Rpb1_6 18 dekfekkYkldlddekkselkelleeevveeiredaelqelldeEyeqLk 67
                    +e+++++ k++ ++++k+   ++ + +  +e ++  +  + l e +  L+
      KHJ34933.1 11 KESVQHESKFNSSESRKR---KACNVSDGNENQKRLRQATSLSEDFSSLE 57
                    555555555555433332...23444444456666666666666666665 PP

  == domain 2  score: 16.2 bits;  conditional E-value: 7.9e-07
                     S-HHHHHHHH---TTSSSSS--TTTSSSHH..HHTT-TTHHHHHHHHHHHHHHHHHHHHHTT-T..T--- CS
  RNA_pol_Rpb1_6  16 lsdekfekkYkldlddekkselkelleeevveeiredaelqelldeEyeqLkedRellrkeifpdeekde 85 
                     ++ +++e++Y ++ ++e+ +   +l +e+ +++++e+ +  ++l+e  ++L+ +Re+lr++i   + k++
      KHJ34933.1 120 IKIKSIEEEYSFKREKEEAEL--TLDKEDAAQKMEEELHNMQILEERVNRLRTKREELRQKISIMNLKKQ 187
                     5667899*****876555444..46678889999**************************9988444333 PP

>> DUF4646  Domain of unknown function (DUF4646)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   9.6e-06     0.086      43      85 ..      75     117 ..      45     143 .. 0.74

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 9.6e-06
     DUF4646  43 vphplvthdVseedWkrFledikaaaalstaekiaagvaplal 85 
                   + l + d+ e++W+ F  di a+ +l  + +i+  +  l++
  KHJ34933.1  75 KLNILPKPDIDENEWAAFEADIAATERLESTTNIVISASALTA 117
                 56789999********************777776554433333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1843  (0.102794); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 1709.08
//
Query:       KHJ34934.1  [L=326]
Description: putative oligosaccharyl transferase subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.5e-100  336.4   0.1   1.8e-100  336.0   0.1    1.1  1  OST3_OST6      OST3 / OST6 family, transporter family
     0.0066   17.2   0.3     0.0066   17.2   0.3    1.8  2  HXXEE          Protein of unknown function with HXXEE motif
  ------ inclusion threshold ------
       0.15   12.0   0.0       0.23   11.4   0.0    1.3  1  Thioredoxin    Thioredoxin
       0.51   10.1   6.0       0.16   11.8   3.2    1.5  2  FA_desaturase  Fatty acid desaturase


Domain annotation for each model (and alignments):
>> OST3_OST6  OST3 / OST6 family, transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  336.0   0.1  4.1e-104  1.8e-100      12     293 .]      35     320 ..      25     320 .. 0.97

  Alignments for each domain:
  == domain 1  score: 336.0 bits;  conditional E-value: 4.1e-104
   OST3_OST6  12 gviklndenykellkgprdysvvvllTatspqfkCelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlllfppkkgpk. 109
                   ++l+d+++++l+++pr+ysv+vllTa++p+f+C+lC+ef+pe++l++ksw +++k+ +++l+Fa++df++g+++Fq lgl+saP+l+lf+p++g   
  KHJ34934.1  35 APLNLDDSSFSRLTAQPRNYSVAVLLTAMDPRFGCKLCHEFHPEWDLLSKSWIRTDKQGETRLLFATLDFNQGRNTFQALGLQSAPVLMLFQPTHGSYa 133
                 6789***************************************************99************************************999998 PP

   OST3_OST6 110 .eskkkdtydfsrggfdaealakfisertg..vkirikrppnyskiiitallvlllvlllklrrklllkilksktlwavlslliillftsGymfnqIrg 205
                  +++ + +++f++g ++ae  +++i++  +     + krp+n++++ +t+++++++++++ + ++++l+il s+++wa +sl+ i+lftsG+mfn+Ir+
  KHJ34934.1 134 iSDALPARLEFTNGPQSAEMAHAWITRYFDgrYYPQFKRPFNWKRLGATIATIFVVITIIGMTWNYILPILMSRNIWAGISLISIILFTSGHMFNHIRK 232
                 8888**************************99999**************************************************************** PP

   OST3_OST6 206 vpfvakdekggisyfaggsqnQfgaEtqivallygllallvilLiklvpriknakvqrvlvivllvlifllfslllslfriKnpgYpy 293
                 vp+v  d++ggi yf+gg++nQfg+Etqi++ +ygll++++i+L+ +vpri ++ +q+++v++++ +ifl++slll+ friKn+gYp+
  KHJ34934.1 233 VPYVSGDGNGGIAYFSGGFSNQFGLETQIISSIYGLLSFATISLALKVPRIADPVSQQIAVLAWSSVIFLTYSLLLNFFRIKNGGYPF 320
                 ***************************************************************************************8 PP

>> HXXEE  Protein of unknown function with HXXEE motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.3   1.5e-06    0.0066      37      95 ..     181     238 ..     143     244 .. 0.70
   2 ?   -2.6   0.2       2.2   9.9e+03      66      68 ..     293     295 ..     259     313 .. 0.49

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 1.5e-06
       HXXEE  37 efilvlvlvvnallvwlilalallakrepllglallafllvnlltHiaqalvlksYnPG 95 
                  +i ++++v++++++ + ++l++l+ r+++ g++l++++l+    H++  ++   Y+ G
  KHJ34934.1 181 ATIATIFVVITIIGMTWNYILPILMSRNIWAGISLISIILFTS-GHMFNHIRKVPYVSG 238
                 344444555555555555889****************999997.899999888888766 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 2.2
       HXXEE  66 llg 68 
                 +l+
  KHJ34934.1 293 VLA 295
                 222 PP

>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   5.2e-05      0.23      30      83 ..      69     129 ..      38     143 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 5.2e-05
                  SHHHHCHHHHHHHHHHHCTT.......TSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTE CS
  Thioredoxin  30 CghCkalaPeleklaeelkd.......kvklakvdvdenedlakkyevegiPtlklfkngk 83 
                  C  C ++ Pe++ l++           ++ +a +d ++ +++ + ++ ++ P l+lf+  +
   KHJ34934.1  69 CKLCHEFHPEWDLLSKSWIRtdkqgetRLLFATLDFNQGRNTFQALGLQSAPVLMLFQPTH 129
                  999**********999887667789999*****************************9876 PP

>> FA_desaturase  Fatty acid desaturase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   3.2   3.6e-05      0.16     114     187 ..     154     231 ..     125     273 .. 0.77
   2 ?   -3.1   0.0       1.2   5.5e+03     136     154 ..     292     310 ..     264     324 .. 0.54

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 3.6e-05
  FA_desaturase 114 lglwlrrlarrrapsksrrrk.wrllawlllllawlglwlalllllglall....lwlvplllllfllalvlnyveHyg 187
                    +  w++r++  r+ ++ +r + w  l++ ++ + ++++++++ +   l  l    +w+   l+ ++l++   ++++H  
     KHJ34934.1 154 AHAWITRYFDGRYYPQFKRPFnWKRLGATIATIFVVITIIGMTWNYILPILmsrnIWAGISLISIILFTSG-HMFNHIR 231
                    333888888888877777777788888888888889999999999999888999*************9999.*****86 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.2
  FA_desaturase 136 rllawlllllawlglwlal 154
                     +law  +++  + l+l +
     KHJ34934.1 292 AVLAWSSVIFLTYSLLLNF 310
                    3333333333333333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       659  (0.0367561); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2534.51
//
Query:       KHJ34935.1  [L=651]
Description: putative actin-bundling protein sac6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-67  224.1   0.2      3e-17   62.8   0.0    4.2  4  CH         Calponin homology (CH) domain
    2.8e-06   27.7   1.8    1.9e-05   25.0   0.6    2.8  2  EF-hand_7  EF-hand domain pair
     0.0025   17.6   2.9      0.048   13.6   0.1    3.4  3  EF-hand_6  EF-hand domain
  ------ inclusion threshold ------
      0.011   15.2   3.7       0.19   11.3   0.3    3.2  3  EF-hand_1  EF hand
       0.37   10.4   2.3       0.62    9.7   0.3    2.4  2  EF-hand_5  EF hand


Domain annotation for each model (and alignments):
>> CH  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.8   0.0     7e-20   2.5e-16       3     106 ..     140     257 ..     138     259 .. 0.93
   2 !   62.8   0.0   8.3e-21     3e-17       2     108 ..     288     390 ..     287     391 .. 0.95
   3 !   58.7   0.0   1.6e-19   5.6e-16       3     106 ..     413     519 ..     411     522 .. 0.93
   4 !   37.9   0.0   4.4e-13   1.6e-09       5     108 ..     540     644 ..     536     645 .. 0.95

  Alignments for each domain:
  == domain 1  score: 59.8 bits;  conditional E-value: 7e-20
                 HHHHHHHHHHHHHTTSTTSSTT.......SCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT........HHHHHHHHHHHHHHHHHHTTCHTTSS-HH CS
          CH   3 qkkellrWinshleeagpkvkv.......edfeedlrDGvlLckLlnklapglvdkkklnks........efkkleNinlaldvaekklgvpkvlieae 86 
                 ++ e++r in++l+++++  +         ++++ ++DG++L+kL+n   p+++d++ ln+         +f++ eN n ++++a+  +g++ v+i++ 
  KHJ34935.1 140 ERTEFTRHINAVLAGDIDIGNRlpfptdtFEMFDECKDGLVLAKLINDSVPDTIDERVLNRPgnkiktlnAFHMTENNNIVIESAK-GIGCSVVNIGSG 237
                 678999999999999877666689999778888**************************988*********************999.************ PP

                 HHHTTSHHHHHHHHHHHHHH CS
          CH  87 dlvegknksvltllaqLfra 106
                 d++e++++++l+l++q +r+
  KHJ34935.1 238 DIIEVREHLILGLIWQVIRR 257
                 ****************9997 PP

  == domain 2  score: 62.8 bits;  conditional E-value: 8.3e-21
                 HHHHHHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTTHHHHHHHHHHHHHHHHHHTTCHTTSS-HHHHHTTSHHHHHHHH CS
          CH   2 eqkkellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnksefkkleNinlaldvaekklgvpkvlieaedlvegknksvltll 100
                 ++++ llrW+n hl+ a++ ++v++f++d +D   +  Ll ++ap+++  + l  +  + l++++++l+ a+ +l+++k+l +++ lv+g+++++l+++
  KHJ34935.1 288 PPEQILLRWVNFHLNAANWPRRVSNFSSDVKDAENYTVLLAQIAPDKCTRRPL--QTRDLLQRAEQVLQNAD-SLNCRKFL-TPSSLVSGNPRLNLAFV 382
                 57999******************************************888877..799***********999.********.***************** PP

                 HHHHHHHH CS
          CH 101 aqLfrafq 108
                 a+Lf+ ++
  KHJ34935.1 383 ANLFNNHP 390
                 ****9875 PP

  == domain 3  score: 58.7 bits;  conditional E-value: 1.6e-19
                 HHHHHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT........HHHHHHHHHHHHHHHHHHTTCHTTSS-HHHHHTTSH CS
          CH   3 qkkellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnks........efkkleNinlaldvaekklgvpkvlieaedlvegkn 93 
                 + + ++ W+ns        + v+++++dlrDG +L++  +k+  g+v+++ +nk         +fk++eN+n+a+++ + + ++++v ++ +d+ +g+ 
  KHJ34935.1 413 EARVFTLWLNSLD----VEPAVNSLFDDLRDGYILLQAYDKVVKGSVNWRFVNKLpsngteisRFKAVENTNYAIELGK-QNRFSLVGVQGADITDGQR 506
                 567899*****43....456789*****************************9889********************888.******************* PP

                 HHHHHHHHHHHHH CS
          CH  94 ksvltllaqLfra 106
                 +++l+l++qL+r+
  KHJ34935.1 507 TLTLGLVWQLMRK 519
                 ***********97 PP

  == domain 4  score: 37.9 bits;  conditional E-value: 4.4e-13
                 HHHHHHHHHHHTTSTTSSTTSCHH.HHHTTSHHHHHHHHHHSTTTSSGGGSTTT..HHHHHHHHHHHHHHHHHHTTCHTTSS-HHHHHTTSHHHHHHHH CS
          CH   5 kellrWinshleeagpkvkvedfe.edlrDGvlLckLlnklapglvdkkklnks..efkkleNinlaldvaekklgvpkvlieaedlvegknksvltll 100
                  ++++W n++ ++ g+++++++f+  ++ +Gv+L+++ln ++ + vd++ ++      ++  N +l +++a+ k+g   +l  +ed+ +++ ++v t++
  KHJ34935.1 540 TDMIKWANDMSKKGGQRSTIRSFKdPSIGTGVFLLDVLNGMKKNYVDYDLVTSGktDDEAYLNSKLSISIAR-KMGATIWL-VPEDICQVRSRLVTTFI 636
                 6899********************99*************************8879999***********999.********.***************** PP

                 HHHHHHHH CS
          CH 101 aqLfrafq 108
                  +L+ +++
  KHJ34935.1 637 GSLMATHE 644
                 ****9886 PP

>> EF-hand_7  EF-hand domain pair
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.6   5.3e-09   1.9e-05       4      69 ..      21      79 ..      19      81 .. 0.86
   2 ?   -0.1   0.0      0.37   1.3e+03      48      61 ..     167     180 ..     132     182 .. 0.72

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 5.3e-09
   EF-hand_7  4 lkeaFkelDtdgdgyldkee.llrllrkifqgagegsklsdeelellfkefDtdkdGvisfdEFlkl 69
                l++aF++lD+d+ gy+d++  ++ + ++     +e ++ +   +++ +ke+ +d+++++ +d++  l
  KHJ34935.1 21 LQDAFRKLDVDDKGYIDEATaIK-ATQA-----SERKPYDV--VRQTLKEVELDSSRRVELDDYFDL 79
                799*****************666.7776.....77777555..********************9765 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.37
   EF-hand_7  48 llfkefDtdkdGvi 61 
                 + f++fD  kdG +
  KHJ34935.1 167 DTFEMFDECKDGLV 180
                 67999999999987 PP

>> EF-hand_6  EF-hand domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.1   1.3e-05     0.048       2      20 ..      21      39 ..      20      46 .. 0.89
   2 ?    2.3   0.0     0.057     2e+02       5      17 ..     168     180 ..     166     183 .. 0.87
   3 ?   -1.1   0.1      0.72   2.6e+03       8      17 ..     433     442 ..     432     444 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 1.3e-05
   EF-hand_6  2 lreaFklfDkdgdGkidae 20
                l++aF+++D+d+ G+id +
  KHJ34935.1 21 LQDAFRKLDVDDKGYIDEA 39
                799**************86 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.057
   EF-hand_6   5 aFklfDkdgdGki 17 
                  F++fD  +dG +
  KHJ34935.1 168 TFEMFDECKDGLV 180
                 7**********75 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.72
   EF-hand_6   8 lfDkdgdGki 17 
                 lfD  +dG+i
  KHJ34935.1 433 LFDDLRDGYI 442
                 79999***98 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.3   5.4e-05      0.19       2      19 ..      21      38 ..      20      39 .. 0.92
   2 ?   -2.0   0.0      0.96   3.4e+03       3      28 ..      57      82 ..      56      83 .. 0.79
   3 ?    3.4   0.1     0.019        68       5      17 ..     168     180 ..     166     181 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 5.4e-05
                HHHHHHHHTTTSSSEEEH CS
   EF-hand_1  2 lkeiFrefDkDgdGkIdf 19
                l+++Fr++D+D  G+Id 
  KHJ34935.1 21 LQDAFRKLDVDDKGYIDE 38
                789*************96 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.96
                HHHHHHHTTTSSSEEEHHHHHHHHHH CS
   EF-hand_1  3 keiFrefDkDgdGkIdfeEfkellkk 28
                ++  +e+  D + +++++++ +l++k
  KHJ34935.1 57 RQTLKEVELDSSRRVELDDYFDLISK 82
                56677888899999999999988876 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.019
                 HHHHHTTTSSSEE CS
   EF-hand_1   5 iFrefDkDgdGkI 17 
                  F++fD  +dG +
  KHJ34935.1 168 TFEMFDECKDGLV 180
                 7**********75 PP

>> EF-hand_5  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.3   0.00017      0.62       1      17 [.      21      37 ..      21      39 .. 0.93
   2 ?   -1.0   0.1      0.41   1.5e+03       3      10 ..     167     174 ..     167     180 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00017
                HHHHHHHH-SS-SSCE- CS
   EF-hand_5  1 lkdtFqaiDlNgDGkIs 17
                l+d+F+++D++  G+I+
  KHJ34935.1 21 LQDAFRKLDVDDKGYID 37
                7999************9 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.41
                 HHHHHH-S CS
   EF-hand_5   3 dtFqaiDl 10 
                 dtF+++D 
  KHJ34935.1 167 DTFEMFDE 174
                 79*****6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (651 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.38
# Mc/sec: 5158.11
//
Query:       KHJ34936.1  [L=1071]
Description: putative mit domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-12   47.3   0.9    3.3e-12   46.3   0.9    1.6  1  MIT       MIT (microtubule interacting and transport) domain


Domain annotation for each model (and alignments):
>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.9   1.9e-16   3.3e-12       1      64 [.     106     170 ..     106     171 .. 0.96

  Alignments for each domain:
  == domain 1  score: 46.3 bits;  conditional E-value: 1.9e-16
         MIT   1 ldkAlelvkkAveeDnagnyeeAlelYkealelLlqalke.kneerrellrekieeYleRaeeLk 64 
                 l+kAl+++++Av +Dna+n+e A + Y+ea+ lL  ++++ + + +r +l++  ++Y++R+ e++
  KHJ34936.1 106 LSKALQKANTAVLLDNAQNFEVAKHSYSEACALLERVMSRsSGDDDRRKLEAIRNTYTSRISEIE 170
                 79*************************************66888*****************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1071 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       976  (0.0544369); expected 358.6 (0.02)
Passed bias filter:                      551  (0.0307323); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.74u 0.29s 00:00:01.03 Elapsed: 00:00:00.44
# Mc/sec: 7338.40
//
Query:       KHJ34937.1  [L=397]
Description: putative gpi-anchored cell wall organization protein ecm33 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-05   25.2   3.4    5.5e-05   23.2   3.4    2.2  1  Ecm33           GPI-anchored cell wall organization protein
    0.00066   19.8   4.6        2.7    8.1   0.9    4.6  4  Recep_L_domain  Receptor L domain
  ------ inclusion threshold ------
       0.15   12.0   0.1       0.29   11.1   0.1    1.4  1  Asp_decarbox    Aspartate decarboxylase


Domain annotation for each model (and alignments):
>> Ecm33  GPI-anchored cell wall organization protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   3.4   9.2e-09   5.5e-05       1      40 []       1      42 [.       1      42 [. 0.82

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 9.2e-09
       Ecm33  1 maflKYllPA...LaaagaaaAaSsCkggtttIenQgDAdgLa 40
                m f+K l+PA   L+ ++ a + S+C++ t tI++Q+DA++La
  KHJ34937.1  1 M-FIKALVPAaayLVGISIAQSSSLCSQPTATINSQADASALA 42
                8.99*****985555566666655***99*************8 PP

>> Recep_L_domain  Receptor L domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   2.1      0.01        62       2     102 ..      44     173 ..      43     179 .. 0.57
   2 !    8.1   0.9   0.00046       2.7      19      99 ..     194     285 ..     150     289 .. 0.69
   3 !    7.6   0.0   0.00067         4      22      62 ..     263     303 ..     247     308 .. 0.74
   4 ?   -0.5   0.0      0.22   1.3e+03      23      49 ..     308     334 ..     287     336 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.01
                     ESEEESBEEEECCHCTSB..................GGGGGGGGG--EESS-EEEESET-SSEGCGTT--EEESSSSBTTTEEEEEES-TT.... CS
  Recep_L_domain   2 CtvieGnLeitltsenee..................eellsflsnveeitGyllikntnlkslsflenLrvIrgrelfeskyalaildnkn.... 74 
                     C+v++Gn+ i +  +  +                    ++   ++++ i+G +++kn +l s+  + +L++++  +      al+ l+ +     
      KHJ34937.1  44 CSVVNGNIVIGPLAAGVIsidgpqqlngnlncenagGLTSLGSTTINSISGAFTLKNLTLLSTLAMGSLKSVNAINWEA-LPALSQLNFPAtvtk 137
                     8888888888777776556777777777777666442222334678888888888888777777777777777655433.333333333333333 PP

                     ..........-SBEE-TTTSEESSSEEEEESETTSBST CS
  Recep_L_domain  75 ..........leeLglpslkeitsgsvviskNpkLCys 102
                               l+ L   +l+++++  + i++N++L + 
      KHJ34937.1 138 aksvlisntfLSTLDGINLETVQT--LGINNNNRLKTF 173
                     333554444466666666665554..667777776655 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00046
                     B...............GGGGGGGGG--EESS-EEEESET-SSEGCGTT--EEESSSSBTTTEEEEEES-TT-SBEE-TTTSEESSSEEEEESETT CS
  Recep_L_domain  19 e...............eellsflsnveeitGyllikntnlkslsflenLrvIrgrelfeskyalaildnknleeLglpslkeitsgsvviskNpk 98 
                     +               + +  +++++  + G+l  + +  +   + +n +++ ++   +++ +la + n +l+++++p lk++  g+v i +N  
      KHJ34937.1 194 DvsfpnlvraanmtfrNVSTVSIPSLAIVDGSLGFYGN-YVPSIIAPNITSVGSKA--DGQGSLAFVANTKLTNISMPLLKTVG-GAVQIANNLA 284
                     34444444444444444445566777777788888777.77777778888888866..45678888888888888888888665.5888888866 PP

                     S CS
  Recep_L_domain  99 L 99 
                     L
      KHJ34937.1 285 L 285
                     5 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.00067
                     GGGGGGG--EESS-EEEESET-SSEGCGTT--EEESSSSBT CS
  Recep_L_domain  22 llsflsnveeitGyllikntnlkslsflenLrvIrgrelfe 62 
                     +  +++ ++++ G ++i+n+   s   +++L ++ g   f+
      KHJ34937.1 263 TNISMPLLKTVGGAVQIANNLALSGINFPSLSYVGGAIDFS 303
                     45577889999999999999888888899999998876665 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.22
                     GGGGGG--EESS-EEEESET-SSEGCG CS
  Recep_L_domain  23 lsflsnveeitGyllikntnlkslsfl 49 
                        l+ +e ++G +++++t+  + s +
      KHJ34937.1 308 TPELPALENVKGGFNLQSTSSIDCSNF 334
                     456888999999999999976666655 PP

>> Asp_decarbox  Aspartate decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   4.9e-05      0.29      24      73 ..     139     190 ..     131     196 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4.9e-05
                   XXEEEEHHHHHHCT--TTBEEEEEETTT--EEEEEE..EEESTTTT-EEEEG CS
  Asp_decarbox  24 GSitideelleaagileyekvqvvnvnngeRletYv..ikgergsgviclnG 73 
                    S+ i +++l++ + ++ e+vq + +nn++Rl+t+   i+  + s  i  nG
    KHJ34937.1 139 KSVLISNTFLSTLDGINLETVQTLGINNNNRLKTFStqIANVTSSLDINSNG 190
                   5999******************************972244455555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.29s 00:00:00.81 Elapsed: 00:00:00.45
# Mc/sec: 2657.11
//
Query:       KHJ34938.1  [L=1082]
Description: hypothetical protein EV44_g0429 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-44  152.5  25.4    1.5e-44  152.1  25.4    1.2  1  DUF4203   Domain of unknown function (DUF4203)


Domain annotation for each model (and alignments):
>> DUF4203  Domain of unknown function (DUF4203)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.1  25.4   8.2e-49   1.5e-44       1     201 []     131     335 ..     131     335 .. 0.94

  Alignments for each domain:
  == domain 1  score: 152.1 bits;  conditional E-value: 8.2e-49
     DUF4203   1 vlgailillGlvlcffGyrlfkltlflsgfllgsllvlvlilkvvvlp.sslvqgaslvaalvvGllgGllallfwelglfllgalgGlllallilsll 98 
                 v+g++li++G ++++ G+++++l+++ls ++l++l+++vlil+v++lp s+++qga++va++ +G+++G++++lf e++++l++++gG+ l++++l+l 
  KHJ34938.1 131 VAGIFLIISGTIYAMTGIKNRWLQICLSSAYLAGLAITVLILYVMNLPiSNVTQGAYIVAVISTGAILGAVSILFSEITEGLCCLFGGFSLSMWLLTLQ 229
                 789************************************************************************************************ PP

     DUF4203  99 egglitslpskaiflvivvlgllgavlslkl..qklllivatsvvGaaavvlgiDyfvgaglkefll.......nlfpratvalltypltrgdwvllal 188
                 ++gl+t ++  +++  i++l++  ++ s +   + +  i+ +s+ Ga+ ++lg+D+f++aglkef++       nlfp   +    ypltrg++v++a+
  KHJ34938.1 230 PNGLLTGNGR-IVL--IAILTIGSFATSYSQytRSYSYIFFISFGGATSIILGVDCFSRAGLKEFWAylwalnpNLFPLEGT---GYPLTRGIRVETAS 322
                 ******8866.777..66666666655555567***************************************9999999998...9************* PP

     DUF4203 189 wivlalvGvlvQf 201
                 +iv++l+G+++Q+
  KHJ34938.1 323 IIVISLAGIISQV 335
                 ************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1082 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1756  (0.0979419); expected 358.6 (0.02)
Passed bias filter:                      571  (0.0318478); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.83u 0.29s 00:00:01.11 Elapsed: 00:00:00.47
# Mc/sec: 6964.34
//
Query:       KHJ34939.1  [L=155]
Description: putative tsa family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-27   94.3   0.0    7.2e-27   93.9   0.0    1.1  1  Redoxin   Redoxin
    5.7e-05   23.0   0.0    7.7e-05   22.6   0.0    1.2  1  AhpC-TSA  AhpC/TSA family


Domain annotation for each model (and alignments):
>> Redoxin  Redoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.9   0.0     8e-31   7.2e-27       1     147 []       3     154 ..       3     154 .. 0.90

  Alignments for each domain:
  == domain 1  score: 93.9 bits;  conditional E-value: 8e-31
                 -TTSBB---ECCEETTCEEEEEHHH.HTTSEEEEEEESTTT-HHHHHTHH..HHHTHHHHHHCSTTTEEEEEESSSHHHHHHHHH.....TT-TSEEEE CS
     Redoxin   1 kagdkaPdftlplaatdgnsvslse.fkgkkvvvnfvpgafcPtCsaehp..yleklaellkekgvdvvavvadndafvkefwgk.....eglkfpvls 91 
                 ++gd++P+++l +  +  n+v+l++ ++++k +v++vp+af+PtCs  h+  yl+    l       +v+vv++ndafv+++wgk     ++  +++l+
  KHJ34939.1   3 QVGDAIPSIVLSE-GKPDNQVHLDKeLAEGKGLVIGVPAAFSPTCSDTHIpdYLKSP-SL---PSAGKVFVVSVNDAFVMNAWGKsldpeKSSGIRFLA 96 
                 68********988.99**********999999*****************88666655.33...4566889*******************98888***** PP

                 -TTSHHHHHTT-TTEEE.GGG.EEE-EEEEEEETTEEEEEEESSSCHT.STTSHHHHH CS
     Redoxin  92 DgsaaftkalGlrleedaseg.lrtpryavidedgkvvylevepepet.eesnaeavl 147
                 D++aaftka+G+++++    g +r++rya+  e+gkv+ ++ ep++++ ++s + +vl
  KHJ34939.1  97 DAGAAFTKAWGVDFDASSVLGgVRSKRYAIRTENGKVSSVHIEPDNTGlNVSAVQQVL 154
                 ***********8877776666*************************879999998887 PP

>> AhpC-TSA  AhpC/TSA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   8.6e-09   7.7e-05       1     110 [.       4     122 ..       4     136 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 8.6e-09
                 TTSB----EEESTT.CEEEEC.HHH.TTSEEEEEEESTST-CCHH.HHHHHHHHCHHHCCCTTEEEEEEESSSCHHHHHHHHH-H.....SSEEEE-TT CS
    AhpC-TSA   1 vgdkapdfelknad.getvsl.sdy.kgkpvvlffypkdwcpvCt.telpalaklyeefkergvevigvsvdspeshkkfiekes....lnfpllsDee 91 
                 vgd++p++ l +++  ++v+l +++ +gk +v+ + p++++p C  t++p++ k          +v+ vsv++ + ++++ +  +      ++ l+D  
  KHJ34939.1   4 VGDAIPSIVLSEGKpDNQVHLdKELaEGKGLVIGV-PAAFSPTCSdTHIPDYLKSPSLPS--AGKVFVVSVNDAFVMNAWGKSLDpeksSGIRFLADAG 99 
                 79999**99997764799***77778887777765.555*****7368999988665444..679******************999999********** PP

                 SHHHHHTT-EETT....TTECSC CS
    AhpC-TSA  92 gkvakaygvlkee....kglalr 110
                  ++ ka+gv +++     g++ +
  KHJ34939.1 100 AAFTKAWGVDFDAssvlGGVRSK 122
                 *********99887776444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (155 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       267  (0.0148921); expected 358.6 (0.02)
Passed bias filter:                      250  (0.0139439); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.28s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1133.14
//
Query:       KHJ34940.1  [L=726]
Description: putative ribosomal processing rna binding nucleolar protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.6e-60  199.1   0.6    1.1e-17   63.5   0.0    5.4  5  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    3.1e-12   47.1   0.1        2.7    8.2   0.0    7.6  8  PHM7_cyt      Cytosolic domain of 10TM putative phosphate tra
      7e-07   28.9   0.0     0.0028   17.2   0.0    2.4  2  RRM_5         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    0.00044   20.3   4.7        2.2    8.3   0.1    3.8  3  RRM_3         RNA binding motif
    0.00072   19.4   0.0        1.7    8.6   0.0    2.9  2  RRM_occluded  Occluded RNA-recognition motif
     0.0046   17.2   0.0      0.017   15.3   0.0    1.9  2  BRAP2         BRCA1-associated protein 2
     0.0048   16.7   0.8        2.1    8.1   0.2    3.7  3  RRM_Rrp7      Rrp7 RRM-like N-terminal domain
  ------ inclusion threshold ------
       0.04   13.6   0.1        1.8    8.3   0.0    3.1  3  SET_assoc     Histone lysine methyltransferase SET associated
       0.04   13.9   0.0        3.7    7.6   0.0    3.1  2  DbpA          DbpA RNA binding domain


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   0.0   5.7e-21   1.1e-17       1      70 []      38     108 ..      38     108 .. 0.99
   2 !   53.0   0.0   1.1e-17   2.3e-14       1      69 [.     157     226 ..     157     227 .. 0.91
   3 !   57.3   0.0     5e-19   9.9e-16       1      57 [.     359     416 ..     359     427 .. 0.95
   4 ?    2.1   0.0     0.089   1.8e+02       2      21 ..     537     556 ..     536     560 .. 0.89
   5 !   16.5   0.0   2.7e-06    0.0053      26      67 ..     611     653 ..     604     656 .. 0.88

  Alignments for each domain:
  == domain 1  score: 63.5 bits;  conditional E-value: 5.7e-21
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 lfV+ Lp+++t ++L  +Fs+  p k++++v d e +kskg++fV+F++ edA+kA e lng+ + gr++k
  KHJ34940.1  38 LFVRSLPSTATSNDLISFFSESYPLKHATVVLDaESKKSKGYGFVTFADTEDAQKAREDLNGTVFLGRKIK 108
                 8*******************************************************************996 PP

  == domain 2  score: 53.0 bits;  conditional E-value: 1.1e-17
                 EEEESETTTSSH.HHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvte.eeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 l+++nLp++ +e e+L +lF+k+G++k  +l++ +  k  gf+fV+++s+ +AekA+++ln+++++gr++
  KHJ34940.1 157 LIIRNLPWSFKEsEQLAQLFGKYGKVKFSTLPKIKESKQAGFGFVTMQSRKSAEKAMASLNNTTIDGRTI 226
                 689******998468***********66666666**********************************98 PP

  == domain 3  score: 57.3 bits;  conditional E-value: 5e-19
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHH CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAle 57 
                 lf++nLp+++ +e+Lke F+kfGpi+ +++v d +tg++kg++fV F  +edA+++  
  KHJ34940.1 359 LFIRNLPFSTLDENLKEKFEKFGPIRYARVVIDnNTGRPKGTGFVCFYRQEDADSCYH 416
                 8*****************************************************9975 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.089
                 EEESETTTSSHHHHHHHHHT CS
       RRM_1   2 fVgnLppdvteeeLkelFsk 21 
                  ++n+p++ + ++Lk+l ++
  KHJ34940.1 537 SIRNIPRNFSSKDLKALARQ 556
                 69*************99765 PP

  == domain 5  score: 16.5 bits;  conditional E-value: 2.7e-06
                 EEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTE CS
       RRM_1  26 ksiklvrd.etgkskgfafVeFeskedAekAlealngkklggr 67 
                 k  k+  +   gks+g++f+e+ s++ A   l+ +ng ++++ 
  KHJ34940.1 611 KGSKIAENtGAGKSRGYGFIEYFSHRWALMGLRWMNGHEVKNE 653
                 66788888899****************************9986 PP

>> PHM7_cyt  Cytosolic domain of 10TM putative phosphate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0013       2.7       1      31 [.      35      64 ..      35      72 .. 0.83
   2 !    7.4   0.0    0.0025       4.9     118     140 ..      73      95 ..      66     120 .. 0.72
   3 ?    4.3   0.0     0.021        42       4      28 ..     157     181 ..     156     187 .. 0.87
   4 !    7.1   0.1    0.0029       5.8     118     168 ..     192     233 ..     183     238 .. 0.77
   5 !    5.9   0.0    0.0067        13       3      40 ..     358     393 ..     356     398 .. 0.87
   6 ?    1.0   0.0      0.23   4.5e+02     118     140 ..     394     416 ..     383     435 .. 0.75
   7 ?   -2.3   0.0       2.3   4.5e+03       6      24 ..     538     555 ..     536     562 .. 0.76
   8 ?    2.6   0.0     0.069   1.4e+02     118     173 ..     621     672 ..     611     672 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0013
    PHM7_cyt  1 srTvlvtgiPkelrseeklkeffeelypgkv 31
                +rT++v+++P+  + +++l +ff+e yp k 
  KHJ34940.1 35 QRTLFVRSLPSTAT-SNDLISFFSESYPLKH 64
                7*************.55699*****999654 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0025
    PHM7_cyt 118 kkkplgaaFvtfesersaaavak 140
                 +kk +g++Fvtf+++++a+++ +
  KHJ34940.1  73 SKKSKGYGFVTFADTEDAQKARE 95 
                 57889**************9965 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.021
    PHM7_cyt   4 vlvtgiPkelrseeklkeffeelyp 28 
                 ++++++P + +++e+l+++f ++  
  KHJ34940.1 157 LIIRNLPWSFKESEQLAQLFGKYGK 181
                 579*****************99865 PP

  == domain 4  score: 7.1 bits;  conditional E-value: 0.0029
    PHM7_cyt 118 kkkplgaaFvtfesersaaavakqakcaaqiqqssnptl.kpkkwtvelAPe 168
                 ++k+ g +Fvt++s++sa++++          +s+n+t  + +++ v++A e
  KHJ34940.1 192 ESKQAGFGFVTMQSRKSAEKAM----------ASLNNTTiDGRTIAVDWAVE 233
                 357889*************996..........34445555888888888876 PP

  == domain 5  score: 5.9 bits;  conditional E-value: 0.0067
    PHM7_cyt   3 TvlvtgiPkelrseeklkeffeelypgkvvesvqivrd 40 
                 T++++++P +++ +e+lke fe++ p  +  +v i  +
  KHJ34940.1 358 TLFIRNLPFSTL-DENLKEKFEKFGPIRY-ARVVIDNN 393
                 9***********.889**********999.78777555 PP

  == domain 6  score: 1.0 bits;  conditional E-value: 0.23
    PHM7_cyt 118 kkkplgaaFvtfesersaaavak 140
                 + +p+g +Fv f  +++a+++++
  KHJ34940.1 394 TGRPKGTGFVCFYRQEDADSCYH 416
                 5689**************99985 PP

  == domain 7  score: -2.3 bits;  conditional E-value: 2.3
    PHM7_cyt   6 vtgiPkelrseeklkeffe 24 
                 +++iP++ +s++ lk + +
  KHJ34940.1 538 IRNIPRNFSSKD-LKALAR 555
                 89******9764.776655 PP

  == domain 8  score: 2.6 bits;  conditional E-value: 0.069
    PHM7_cyt 118 kkkplgaaFvtfesersaaavakqakcaaqiqqssnptl..kpkkwtvelAPePrDvi 173
                   k +g++F+++ s r+a   + +  ++ +    + ++   kp++++ve+A e  +v+
  KHJ34940.1 621 AGKSRGYGFIEYFSHRWALMGL-R-WMNGH----EVKNEngKPQRLVVEFAIENAQVV 672
                 45889************96554.2.22222....2222224799*******9988875 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.2   0.0   0.00044      0.88      62      98 ..      75     111 ..      72     128 .. 0.89
   2 !   17.2   0.0   1.4e-06    0.0028      26     110 ..     154     242 ..     126     255 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00044
       RRM_5  62 tkketalvqmgdasaveravqHLnnaklfgkrleval 98 
                   k++ +v  +d+ ++++a++ Ln++   g+++++  
  KHJ34940.1  75 KSKGYGFVTFADTEDAQKAREDLNGTVFLGRKIKIET 111
                 568999*************************999975 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 1.4e-06
       RRM_5  26 gsVllVyglepdkvnldklFnlfclYgnverv...kflktkk.etalvqmgdasaveravqHLnnaklfgkrlevalSKqqavsekepf 110
                  + l++ +l  ++   ++l  lf+ Yg v+     k+  +k+ +  +v m + +++e+a+  Lnn+++ g+ + v    +++v e++  
  KHJ34940.1 154 LPKLIIRNLPWSFKESEQLAQLFGKYGKVKFStlpKIKESKQaGFGFVTMQSRKSAEKAMASLNNTTIDGRTIAVDWAVEKSVWESQSK 242
                 5668899999999999************9854111333333236789**************************9999888888775544 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.1    0.0011       2.2      39     100 ..      79     147 ..      60     148 .. 0.79
   2 ?    3.1   0.7     0.048        95      16      87 ..     170     241 ..     165     260 .. 0.63
   3 !    8.0   0.0    0.0014       2.8      15      78 ..     370     440 ..     359     464 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0011
                 EEEEEESSHHHHHHHHHHHHHC.....-B-CCTSSEEEE..E--HHHHHHHHHHHHHHHHHCC---S-S CS
       RRM_3  39 egevrFkedeeakkalekatea.....klkikdaevtle..lLeGeeEkeywkkiledkqkkknnarek 100
                  g v F++ e+a+ka e +  +     k+ki+ ae + +  ++++    +   +i e+ +++k n+ +k
  KHJ34940.1  79 YGFVTFADTEDAQKAREDLNGTvflgrKIKIETAEPRSRevVIDDRSSGKKISRISEEAAATKRNRINK 147
                 5789***************999999**888888888764325555566788999999888888776665 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.048
                 HHHHHHCHCCS-ECE.....EEE-TTSSEEEEEESSHHHHHHHHHHHHHC-B-CCTSSEEEEE--HHHHHHHHHHHH CS
       RRM_3  16 edikellsklgevay.....vdyekgdkegevrFkedeeakkalekateaklkikdaevtlelLeGeeEkeywkkil 87 
                 e++ +l+ k+g+v++     +  +k +  g v  ++ ++a+ka+ ++ ++ +  +   v +       Ek  w+   
  KHJ34940.1 170 EQLAQLFGKYGKVKFstlpkIKESKQAGFGFVTMQSRKSAEKAMASLNNTTIDGRTIAVDWA-----VEKSVWESQS 241
                 78899999*****9933333333444445667778888888888888887544444444443.....3555555544 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0014
                 HHHHHHHCHCCS-ECE....EEE-TTSS..EEEEEESSHHHHHHHHHHHHHC.-B-CCTSSEEEEE--HHH CS
       RRM_3  15 redikellsklgevay....vdyekgdk..egevrFkedeeakkalekatea.klkikdaevtlelLeGee 78 
                  e++ke ++k+g+++y    +d + g    +g v F  +e+a    + a  + k   +  + ++ +Le+e 
  KHJ34940.1 370 DENLKEKFEKFGPIRYarvvIDNNTGRPkgTGFVCFYRQEDADSCYHGAPRTfKSGANAVKAKISILEDET 440
                 689*************4444444444331245699****9*999999998887777888888888898886 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.6   0.0    0.0017       3.4      41      72 ..      80     111 ..      35     114 .. 0.66
   2 !    8.6   0.0   0.00086       1.7      42      69 ..     200     227 ..     169     229 .. 0.84

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0017
  RRM_occluded  41 AivefkdekiagkasLaLdgsefegkklrcGt 72 
                    +v f+d+++a ka   L+g+ f g+k+++ t
    KHJ34940.1  80 GFVTFADTEDAQKAREDLNGTVFLGRKIKIET 111
                   589*************************9865 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00086
  RRM_occluded  42 ivefkdekiagkasLaLdgsefegkklr 69 
                   +v ++++k+a ka+ +L++++++g+++ 
    KHJ34940.1 200 FVTMQSRKSAEKAMASLNNTTIDGRTIA 227
                   799***********************96 PP

>> BRAP2  BRCA1-associated protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.0   8.7e-06     0.017       7      73 ..      35     102 ..      30     109 .. 0.89
   2 ?   -2.9   0.0       4.1   8.1e+03       9      27 ..     535     553 ..     533     559 .. 0.80

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 8.7e-06
       BRAP2   7 stllcilavPsylsladllkFvgsvlekvseiriir.dgkenrymvLikfkdqesadeFykefngkkF 73 
                 +++l++ ++Ps+ + +dl++F+++     + + ++  ++k+++    + f d e+a++ ++++ng  F
  KHJ34940.1  35 QRTLFVRSLPSTATSNDLISFFSESYPLKHATVVLDaESKKSKGYGFVTFADTEDAQKAREDLNGTVF 102
                 6789*******************88888788888887888999999*******************998 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 4.1
       BRAP2   9 llcilavPsylsladllkF 27 
                  l i  +P ++s +dl  +
  KHJ34940.1 535 RLSIRNIPRNFSSKDLKAL 553
                 578899********99765 PP

>> RRM_Rrp7  Rrp7 RRM-like N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1     0.025        49      37      65 ..      31      59 ..      20      77 .. 0.75
   2 !    8.1   0.2    0.0011       2.1      41      65 ..     356     380 ..     344     395 .. 0.77
   3 ?    0.0   0.0      0.32   6.4e+02     106     138 ..     391     423 ..     383     429 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.025
    RRM_Rrp7 37 deessrslFlvNlPiettletlkkffqkv 65
                + + +r+lF+  lP ++t + l +ff + 
  KHJ34940.1 31 NASCQRTLFVRSLPSTATSNDLISFFSES 59
                34468*********************987 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.0011
    RRM_Rrp7  41 srslFlvNlPiettletlkkffqkv 65 
                   +lF+ NlP  t  e+lk+ f+k 
  KHJ34940.1 356 LTTLFIRNLPFSTLDENLKEKFEKF 380
                 579*******************986 PP

  == domain 3  score: 0.0 bits;  conditional E-value: 0.32
    RRM_Rrp7 106 eeeaklPkntglvkfvDkssvelafnalkKlsk 138
                 ++++  Pk tg+v f  ++ ++++++ + +  k
  KHJ34940.1 391 DNNTGRPKGTGFVCFYRQEDADSCYHGAPRTFK 423
                 778889****************99987766666 PP

>> SET_assoc  Histone lysine methyltransferase SET associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.3   0.0    0.0009       1.8      35      64 ..      78     108 ..      73     110 .. 0.86
   2 ?   -1.7   0.0       1.1   2.2e+03      37      58 ..     200     221 ..     194     228 .. 0.81
   3 ?    1.1   0.0      0.15     3e+02      37      51 ..     402     416 ..     367     421 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0009
   SET_assoc  35 Gy.YivFndskeAerCfraedgtklftyrmv 64 
                 Gy +++F+d+++A+++ +  +gt +++ +++
  KHJ34940.1  78 GYgFVTFADTEDAQKAREDLNGTVFLGRKIK 108
                 6669*******************99988776 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.1
   SET_assoc  37 YivFndskeAerCfraedgtkl 58 
                 +++ ++ k Ae+++   ++t++
  KHJ34940.1 200 FVTMQSRKSAEKAMASLNNTTI 221
                 77778889******99999987 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.15
   SET_assoc  37 YivFndskeAerCfr 51 
                 ++ F  +++A  C++
  KHJ34940.1 402 FVCFYRQEDADSCYH 416
                 89***********97 PP

>> DbpA  DbpA RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.0     0.068   1.4e+02      48      71 ..      87     110 ..      82     111 .. 0.92
   2 ?    7.6   0.0    0.0019       3.7      48      70 ..     206     228 ..     197     229 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.068
                 TT-HHHHHHHHTT--SSS----EE CS
        DbpA  48 kekaeevlkalkkkkikGrkvrve 71 
                  e+a+++ + l+++ + Grk+++e
  KHJ34940.1  87 TEDAQKAREDLNGTVFLGRKIKIE 110
                 689999****************98 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.0019
                 TT-HHHHHHHHTT--SSS----E CS
        DbpA  48 kekaeevlkalkkkkikGrkvrv 70 
                 ++ ae+++++l++++i+Gr++ v
  KHJ34940.1 206 RKSAEKAMASLNNTTIDGRTIAV 228
                 6789****************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (726 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1032  (0.0575604); expected 358.6 (0.02)
Passed bias filter:                      339  (0.0189079); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.41
# Mc/sec: 5270.57
//
Query:       KHJ34941.1  [L=617]
Description: putative glycosyltransferase family 90 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.3e-19   69.6   0.6    2.1e-12   46.7   0.0    3.3  2  Glyco_transf_90  Glycosyl transferase family 90


Domain annotation for each model (and alignments):
>> Glyco_transf_90  Glycosyl transferase family 90
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   0.1   5.7e-08     0.001       8     100 ..     127     209 ..     121     314 .. 0.72
   2 !   46.7   0.0   1.2e-16   2.1e-12     207     325 ..     480     605 ..     458     612 .. 0.85

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 5.7e-08
  Glyco_transf_90   8 dyfrvieeDLkpwretgitreaverakrkalfrlviingrvyvekykksvqtrdvftiwgilqLlrkypgklpDlelmfncdDrPvvkkkdyr 100
                      d+f +i +DL+p+   g++  ++ +  r+ ++ + i n+++  e+  +       f + + l+L+++++  lpD+++ +n +D P + +  ++
       KHJ34941.1 127 DFFDQIYHDLTPFW--GVKPSMMREKARSYEMTIRIRNHQASAES--N------WFWTQIWLDLIKSIQHLLPDMDIALNAMDEPRIVTPWEE 209
                      89***********7..59999999998998998888887776666..3......55556779***********************99765544 PP

  == domain 2  score: 46.7 bits;  conditional E-value: 1.2e-16
  Glyco_transf_90 207 essledqckhkYkiyieGvaasvsekyilacdslvllvkpeyydffsreLkplehYvPikskdk..lrdlkeavdw......gnahdekaqeia 292
                      ++ + dq+++k+   i+G + s + +  l+  sl ++  + ++++  + L+p++h+vP++++ +     +++ + +       + hd+ka++ia
       KHJ34941.1 480 NMMMGDQFQRKFLPDIDGNSFSGRYRGFLLSTSLPIK-ATIFHEWHDSRLVPWKHFVPMDNRFMefWGIMQYFIGYegtnikIQGHDDKAKKIA 572
                      677889***************************9976.579******************995333344567777774433333679******** PP

  Glyco_transf_90 293 eegseFireeLkmddvydYmfhLlteYakllky 325
                        g++++++ L+ +d++ Y ++Ll eYa+ll  
       KHJ34941.1 573 LDGQNWANQVLRTEDMQVYVLRLLLEYARLLDE 605
                      ******************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (617 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       499  (0.027832); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 4372.57
//
Query:       KHJ34942.1  [L=208]
Description: putative nuclear distribution protein ro10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    0.00015   21.7   1.9    0.00015   21.7   1.9    1.8  2  Dynactin_p22  Dynactin subunit p22


Domain annotation for each model (and alignments):
>> Dynactin_p22  Dynactin subunit p22
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   1.9   8.2e-09   0.00015       2     151 ..      13     165 ..      12     173 .. 0.75
   2 ?   -3.4   0.0      0.43   7.8e+03       5      16 ..     180     191 ..     178     204 .. 0.61

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 8.2e-09
  Dynactin_p22   2 ldaLEeriaeLEkrvlGeekekeked..esiidsLakvqkklssavskrekikellkkleelekyLdpeyedseelpde...vKleliL.aeedeLk 92 
                   +++L+ r++++E+ + G+     +++   si ++++ +++kl++++s+ + ++ell+ +++++++ +   +ds   p++   + ++ i+ a++    
    KHJ34942.1  13 INLLQGRLERIEYALCGDTDITFNTSsqTSIGERILVIEQKLKQLISEFKPLEELLNLYSTHQDLFNILWADSV--PTDldiISMKSIInASAILFS 107
                   689**************998765555579**************************************8777775..555223222333303333334 PP

  Dynactin_p22  93 ktaalleqlqeLkpvldseeikdvpelkekLekLsqihlkqqeeveelseevkkllekY 151
                   +t+++l+++++   +   e   ++  l+++++k+++i+ +q  e+++l e+   l+ek+
    KHJ34942.1 108 ETTSRLNSVNDIP-IPPPELSAQLIALQPQISKIEAIQANQLLEIKNLRERSALLVEKW 165
                   5555666666653.22223333466799999*****************99999998875 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.43
  Dynactin_p22   5 LEeriaeLEkrv 16 
                   L++r +++E+++
    KHJ34942.1 180 LDRRARQIEQKI 191
                   555666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       900  (0.050198); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1502.50
//
Query:       KHJ34943.1  [L=329]
Description: putative sh3-domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.9e-08   32.8   0.1    6.2e-08   32.1   0.1    1.3  1  SH3_1         SH3 domain
    4.4e-06   26.4   0.0    8.7e-06   25.5   0.0    1.4  1  SH3_9         Variant SH3 domain
    2.3e-05   24.0   0.0    3.9e-05   23.2   0.0    1.3  1  SH3_2         Variant SH3 domain
  ------ inclusion threshold ------
          1    9.6   3.8       0.49   10.7   1.2    1.9  1  DUF2530       Protein of unknown function (DUF2530)
        4.3    6.5   7.1        5.9    6.1   7.1    1.1  1  Peptidase_U4  Sporulation factor SpoIIGA


Domain annotation for each model (and alignments):
>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.1   1.7e-11   6.2e-08       1      48 []     276     323 ..     276     323 .. 0.94

  Alignments for each domain:
  == domain 1  score: 32.1 bits;  conditional E-value: 1.7e-11
                 EESSSBEXSS..TTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEEG CS
       SH3_1   1 iAlYDYeaee..sdELsfkkGDviivleksedgWwkgrlkgtgkeGliPs 48 
                 +A+Y Yea+   ++E+sf k + ++v++ s   Ww+++  + g++G+ Ps
  KHJ34943.1 276 KAIYSYEANPedANEISFAKHELLEVSDVSGR-WWQAKKEN-GETGIAPS 323
                 7*******998899**************8888.*******9.6******8 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0   2.4e-09   8.7e-06       1      48 [.     277     326 ..     277     326 .. 0.91

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 2.4e-09
       SH3_9   1 Alypyepredd..eLsLqrGDvitvieesedgWlegsl.tGrtGlvPanyv 48 
                 A+y ye+  +d  e+s+ + + + v++  ++ W+++++ +G+tG  P+ny+
  KHJ34943.1 277 AIYSYEANPEDanEISFAKHELLEVSDV-SGRWWQAKKeNGETGIAPSNYL 326
                 89***96666666*************88.9*******98***********6 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.0   1.1e-08   3.9e-05       3      54 ..     276     326 ..     274     328 .. 0.86

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 1.1e-08
                 EESS-B-S..CGCCB--B-TTEEEEEE..EEEECTTEEEEEE.CCCEEEEEGCGE CS
       SH3_2   3 raiedyvg..edkseLsfkkGdvikvlslgskdsdgwwegev.gGrvGlfPsslv 54 
                 +ai +y++  ed +e+sf k++++ v       s+ ww++ + +G  G++Ps+++
  KHJ34943.1 276 KAIYSYEAnpEDANEISFAKHELLEVS----DVSGRWWQAKKeNGETGIAPSNYL 326
                 666666665599999***********7....7889*****999**********97 PP

>> DUF2530  Protein of unknown function (DUF2530)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.2   0.00014      0.49      16      65 ..      46     100 ..      30     105 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00014
     DUF2530  16 vivvgtllWlvalvvllvvgdales.....wlpvclaGlvvGllGlaiflwQRrA 65 
                  i + +l+Wlva+v  +v++ +        + +++la ++  +lG+ i+l Q +A
  KHJ34943.1  46 TISISVLAWLVAFVGSVVSTAEKLVpdfpnYSWFALAYMLCCILGIIIVLAQDTA 100
                 4677899*******998775443335666699*******************9877 PP

>> Peptidase_U4  Sporulation factor SpoIIGA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   7.1    0.0016       5.9      35     135 ..      53     151 ..      44     164 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0016
  Peptidase_U4  35 lllaAllGalyvvlvlflpklesillsillkilvsllmvliafgpkslkeflkalllfylvsfllgG.ilfalsylllksknllvlllgalvaylll 130
                    +l A++G++ +++  ++p + ++ +  l+++l+++l ++i+    + +++  a++ f+++  +l     + l y   + ++ ++++ ++ +++ ++
    KHJ34943.1  53 AWLVAFVGSVVSTAEKLVPDFPNYSWFALAYMLCCILGIIIVLAQDTAQNYHIAIVGFLACGLVLTTsSTNSLVY---SADGAKHTVAAGHIVLSMV 146
                   5789***************999999999***********999998888888877777777766666545555555...2334566666666666665 PP

  Peptidase_U4 131 kllvk 135
                   ++++ 
    KHJ34943.1 147 NIVWI 151
                   54443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       826  (0.0460706); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.40
# Mc/sec: 2490.01
//
Query:       KHJ34944.1  [L=957]
Description: putative phd-finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-06   27.8   9.6    3.8e-06   26.7   9.6    1.6  1  PHD             PHD-finger
  ------ inclusion threshold ------
      0.014   15.2   0.1       0.15   12.0   0.0    2.4  2  Phage_tail_APC  Phage tail assembly chaperone protein


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   9.6   4.2e-10   3.8e-06       2      51 ..      43      91 ..      42      92 .. 0.91

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 4.2e-10
                BTTTTSTTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSS.TBSSTTTHT CS
         PHD  2 CavCkkksdeeeelvqCdgCkrwfHqkClkppleseekpeg.ewlCekCke 51
                C +C+  sd+++++++C++C++w+H +C  p   ++   e+ +  C  Ck+
  KHJ34944.1 43 C-ICDY-SDDDGNTIYCEKCDTWQHIECFYPGRVDDASREDfDHSCADCKP 91
                8.****.************************98877777768*******97 PP

>> Phage_tail_APC  Phage tail assembly chaperone protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.6e-05      0.15      30      56 ..     710     736 ..     682     738 .. 0.87
   2 ?   -0.2   0.0      0.11   9.6e+02      10      32 ..     892     914 ..     885     917 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.6e-05
                     HHHHHHHHHHHHHS---SS--S----- CS
  Phage_tail_APC  30 rqalkaYrqaLRDlPeqegfPaaveWP 56 
                     r  l +Yr  LRDlP + + P   e P
      KHJ34944.1 710 RLLLNRYRKDLRDLPGTHDLPTHSENP 736
                     55689**************99777766 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.11
                     HHHHHTH.HHHSTTS---HHHHHH CS
  Phage_tail_APC  10 rrLaasD.wvqlpDspldeeerqa 32 
                     +r++++D  +q+p+ p+ ++ r++
      KHJ34944.1 892 ARMKKTDlSTQVPKTPIEKK-RSE 914
                     899****779****999875.555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (957 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1060  (0.0591221); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.26s 00:00:00.98 Elapsed: 00:00:00.44
# Mc/sec: 6489.42
//
Query:       KHJ34945.1  [L=279]
Description: putative histone chaperone [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-73  245.1   0.0    3.4e-73  244.7   0.0    1.2  1  ASF1_hist_chap  ASF1 like histone chaperone
  ------ inclusion threshold ------
       0.24    9.8   3.7      0.091   11.1   1.4    1.4  1  Adeno_terminal  Adenoviral DNA terminal protein
        4.1    5.5  16.4          5    5.2  16.4    1.0  1  Nop14           Nop14-like family


Domain annotation for each model (and alignments):
>> ASF1_hist_chap  ASF1 like histone chaperone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  244.7   0.0   5.6e-77   3.4e-73       1     154 []       1     154 [.       1     154 [. 1.00

  Alignments for each domain:
  == domain 1  score: 244.7 bits;  conditional E-value: 5.6e-77
                     X-SEEEEEEEESS-SEETTS-EEEEEEEEESS--SS-EEEEEEEESSSSSGGGEEEEEEEEEES--SEEEEEEEEE----GGGSSSGGGSEEEEE CS
  ASF1_hist_chap   1 mslvnvtnvkvlnnpakfsdpfkfeitfeclekLeedlewkliyvgsaeseeedqeLdsvlvGPikvGvnkFvfeadppdvskipkedvlgvtvi 95 
                     ms+v+++ v+vl+npa+f dp++feitfecle+L++dlewkliyvgsa+s+++dqeLds+lvGPi+vGvnkF+feadppd+skip+ ++lgvtvi
      KHJ34945.1   1 MSVVSLLGVNVLKNPARFGDPYEFEITFECLEALQKDLEWKLIYVGSATSNDHDQELDSLLVGPIPVGVNKFIFEADPPDTSKIPDAEILGVTVI 95 
                     9********************************************************************************************** PP

                     EEEEEETTEEEEEEEEEEEEEETT--CTTHHHS---GGGEEEEE-TTS-EEEE----TT CS
  ASF1_hist_chap  96 lltasYkeqeFvrvGYyvnneyedeelkenppekpkieklvRniladkprvtrfkikwd 154
                     llt++Y+++eFvrvGYyvnneye++el+++pp+kp++ek++Rnila+kprvtrf+ikwd
      KHJ34945.1  96 LLTCAYDGREFVRVGYYVNNEYESDELNTDPPAKPILEKVRRNILAEKPRVTRFAIKWD 154
                     **********************************************************8 PP

>> Adeno_terminal  Adenoviral DNA terminal protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   1.4   1.5e-05     0.091     305     369 ..     148     216 ..     129     221 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 1.5e-05
  Adeno_terminal 305 rLPvrRRrRreesPlppPeeeeeG.iaaeeeeeeeeeeeeledevis...svaelirlLeeeLseearr 369
                     r  ++    ++ +Pl pPe+ e   +a+ ee   ee+eeele+ev++    va++  +++e  ++ a++
      KHJ34945.1 148 RFAIKWDSDESAPPLYPPEQPEADlVADGEEYGAEEAEEELEEEVVEgtdGVADADAMIDEGETTGAQN 216
                     334444444889999999997766156666669************962225777777766666666655 PP

>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2  16.4   0.00084         5     286     416 ..     141     259 ..     131     278 .. 0.42

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.00084
       Nop14 286 lEeeRlkRMrgeedeeeeeekkkkkkkeasaDdldddfvleeeeeeeefglgkgl..kataeeeeeededdfeedddlveseseeee.eeeeedeeeee 381
                 +E+ R+ R   + d++e +      ++ ++aD  +d+ +   ee+eee  l++++  +     +++ d d  +++ +    ++++++  +ee+d  +e+
  KHJ34945.1 141 AEKPRVTRFAIKWDSDESAPPLYPPEQ-PEADLVADGEEYGAEEAEEE--LEEEVveG----TDGVADADAMIDEGETTGAQNKSSKaVDEESDVGSED 232
                 688888888887666666666655555.88998888888877766664..44555321....2233333333222222222222222112222222222 PP

       Nop14 382 deeeeeeeeededdlsdleseeeeeedeleeelle 416
                  e e++ ++ede +       ee+ +de   el +
  KHJ34945.1 233 LEAESSGSDEDEVE-------EEDHDDE-PMELDT 259
                 22111111111111.......1111222.111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (279 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       610  (0.0340231); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2006.59
//
Query:       KHJ34946.1  [L=762]
Description: putative rrna processing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-08   33.4   2.0       0.92    9.3   0.0    6.4  6  PUF       Pumilio-family RNA binding repeat
  ------ inclusion threshold ------
       0.11   12.1   1.0       0.19   11.2   0.4    1.7  2  PP_M1     Phosphoprotein


Domain annotation for each model (and alignments):
>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.1    0.0014        12       4      35 .]     104     135 ..     101     135 .. 0.90
   2 !    4.1   0.0    0.0048        43       1      20 [.     137     156 ..     137     159 .. 0.88
   3 ?   -0.7   0.0      0.16   1.4e+03       8      19 ..     204     215 ..     198     219 .. 0.84
   4 !    9.3   0.0    0.0001      0.92       5      33 ..     286     315 ..     285     317 .. 0.86
   5 ?    0.1   0.0     0.089     8e+02      12      31 ..     350     369 ..     344     373 .. 0.75
   6 !    6.1   0.0    0.0011        10       9      26 ..     583     600 ..     580     605 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0014
                 GGHHHHHTSTTHHHHHHHHHHHSCHHHHHHHH CS
         PUF   4 gnlvqLstdqyGnyvvQkllehateeqkklil 35 
                 ++ +++++ q  ++++++l+  +++ qkk ++
  KHJ34946.1 104 NKELKIACSQSCSRLMERLILLCSTDQKKTLF 135
                 6788999*********************9876 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.0048
                 HHGGGHHHHHTSTTHHHHHH CS
         PUF   1 sikgnlvqLstdqyGnyvvQ 20 
                 +++gn+v L+ ++++++ ++
  KHJ34946.1 137 KFSGNFVHLIRHRFASHCCE 156
                 689**************776 PP

  == domain 3  score: -0.7 bits;  conditional E-value: 0.16
                 HHHTSTTHHHHH CS
         PUF   8 qLstdqyGnyvv 19 
                 +L td ++++ +
  KHJ34946.1 204 SLLTDVFASHTL 215
                 799******965 PP

  == domain 4  score: 9.3 bits;  conditional E-value: 0.0001
                 GHHHHHTSTTHHHHHHHHHHH.SCHHHHHH CS
         PUF   5 nlvqLstdqyGnyvvQklleh.ateeqkkl 33 
                 ++  L+t++ Gn  +Q lle  +t+++ k 
  KHJ34946.1 286 FIRLLATHPTGNPTLQLLLELeLTSPNLKE 315
                 67779***************9999888775 PP

  == domain 5  score: 0.1 bits;  conditional E-value: 0.089
                 STTHHHHHHHHHHHSCHHHH CS
         PUF  12 dqyGnyvvQkllehateeqk 31 
                 d  G+++++++   a+ +  
  KHJ34946.1 350 DSIGSRLLETICMFASGKLF 369
                 899******99866666655 PP

  == domain 6  score: 6.1 bits;  conditional E-value: 0.0011
                 HHTSTTHHHHHHHHHHHS CS
         PUF   9 LstdqyGnyvvQklleha 26 
                 L+    G++v+  ll+++
  KHJ34946.1 583 LCLSSVGSHVLDALLTCT 600
                 89999**********975 PP

>> PP_M1  Phosphoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.51   4.6e+03     270     296 .]     368     394 ..     353     394 .. 0.75
   2 ?   11.2   0.4   2.2e-05      0.19     111     179 ..     655     723 ..     642     745 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.51
                 H-HHHHHHB-HHHHHHHHHHHHHHHHH CS
       PP_M1 270 sskkfqllvdsdklskllqddlnryla 296
                   kk   +v +d+++ +l++++ +y+a
  KHJ34946.1 368 LFKKIYQIVFKDRIAAILRNEISSYTA 394
                 45666667889999*******999986 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 2.2e-05
                 XXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       PP_M1 111 Gerffkiwsqaveeiisyvavnfpapvgktsedkstktteekvkkeassapskkeeqsskiklasqess 179
                  + f ++ s+ v +++ +  + +p p+  +s + stktt +  ++e++ + + ++++s ki+ + ++ +
  KHJ34946.1 655 IDLFKRMRSDWVRKVKNFYLTTIPIPSRSQSMNSSTKTTMIMNNNETEVSCKTSNHPSIKIDAEIKKDK 723
                 577889999***************************************999999999999876655443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (762 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       688  (0.0383736); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 5641.10
//
Query:       KHJ34947.1  [L=1058]
Description: putative cfia complex component rna14 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-93  312.3   0.1    4.9e-93  312.3   0.1    4.9  4  Suf       Suppressor of forked protein (Suf)
    4.6e-07   30.4   0.0    1.7e-05   25.3   0.0    2.8  2  TPR_16    Tetratricopeptide repeat
    5.3e-06   26.8   0.3     0.0058   17.3   0.1    4.7  4  TPR_14    Tetratricopeptide repeat
    1.3e-05   25.6   0.0      0.012   16.1   0.0    2.9  2  TPR_19    Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.062   13.3   0.2       0.22   11.5   0.2    1.9  1  HAT       HAT (Half-A-TPR) repeat
        4.3    7.9   9.0       0.89   10.1   4.3    2.2  2  APG6_N    Apg6 coiled-coil region


Domain annotation for each model (and alignments):
>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   2.2      0.42   1.3e+03     222     246 ..     116     157 ..      23     210 .. 0.48
   2 !   12.9   1.0   2.7e-05     0.079       3     116 ..     229     349 ..     229     353 .. 0.84
   3 ?   -0.3   3.9      0.29   8.7e+02      86     123 ..     368     403 ..     363     645 .. 0.87
   4 !  312.3   0.1   1.7e-96   4.9e-93       1     296 []     652     966 ..     652     966 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.42
         Suf 222 k..................kgaagrrleqqrksessksaeaas 246
                                     +++++++ +  + + +++ +a++
  KHJ34947.1 116 DsdeeyeaalpsvplnelqPSSNMPNQLE-LQHQNKAPPQAIQ 157
                 22223333333233322221111111111.1111111111111 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 2.7e-05
         Suf   3 vwikymrasrRaeGikgaRkvFkkARkkprltyevyvasAllEyyiskdkkvAtkIFelGlKkFpedeefvlkYldyLislnddnn.....aRvlfek. 95 
                 +wi +++  r  +++ +aR+v+++  k      e++va   +E   +++   A  IF + l + p+   +   Yl+y  + nd  n     aR++  + 
  KHJ34947.1 229 AWITLIKEHRSRNRLDEARAVYERFFKVFPQAAEMWVAYIEMELE-NDNFTAAETIFGRSLLTVPNVALWS-LYLNYIRRRNDLMNdatgvARATVTQs 325
                 7***********************999999999*****9999999.7777779**********99877665.5*******9998775555578876552 PP

         Suf  96 ...vvsklskekeakelykkfley 116
                    v++++ ++k++ ++++ ++++
  KHJ34947.1 326 ydfVLANIGNDKDSGKIWHEYIQF 349
                 2226778888888********998 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.29
         Suf  86 dnnaRvlfekvvsklskekeakelykkfleyestfgdl 123
                  +++R  f+++++ +++    + ++k + ++e   + +
  KHJ34947.1 368 MDQLRKAFQRAINVPMSTL--NAIWKEYDQFEMSLNKI 403
                 5677888888888877766..78888888888776655 PP

  == domain 4  score: 312.3 bits;  conditional E-value: 1.7e-96
         Suf   1 tlvwikymrasrRaeG.......ikgaRkvFkkARkkprltyevyvasAllEyyiskdkkvAtkIFelGlKkFpedeefvlkYldyLislnddnnaRvl 92 
                 +++wi++mra+rR++G         g+Rk+F++AR++++lt++vyva+Al+E+++++d++ +tkIFe+G+K+Fped +f+l+Yl++L+s+ d++naRv+
  KHJ34947.1 652 SVAWIALMRAMRRVQGkgnnkdsNGGSRKIFSDARQRGKLTSDVYVAAALIEHHVYNDPA-GTKIFERGAKLFPEDADFTLEYLKHLLSIGDTTNARVT 749
                 689*******************999***********************************.************************************** PP

         Suf  93 fekvvsklskeke....akelykkfleyestfgdlssilklekRmeelfpedskleqfvdRYklknldpikkrelksetkqeeekallqkkee.....q 182
                 fe+vvs+l++ +e    ak+ly++f++yes++g+ls+i kle+R++elfp+d+kl +f++R++ +n+dp+++r + s+++q+++k l+q  e+     +
  KHJ34947.1 750 FETVVSRLTQRPEliakAKPLYAYFHKYESQYGELSQISKLEQRIAELFPDDPKLSRFASRFSGENFDPTAVRLIVSPAAQMKPKVLVQSIEHpniarE 848
                 *************************************************************************************77765554333320 PP

         Suf 183 aaslees.............kvpqaqeskkrklesedss..vkkPdklqmvespkkgaagrrleqqrksessksaeaasksqkalqqqpaplprsival 266
                       s             ++ q+++s+kr+ + ed++  +++P+kl+++esp kgaagrrl+qqr+ +++++a+a++      ++ + ++pr++  l
  KHJ34947.1 849 ------SsvtqynpeasprsQYIQNTNSPKRPFPLEDFEsdLNRPRKLARGESPLKGAAGRRLDQQRRLQQNQGAPAWQ-----SNSVASTVPRDVNIL 936
                 ......24667778888888999999999999999998888**********************************9999.....6778888******** PP

         Suf 267 lsvLPsaqsfdgpvfnpeklvellretelP 296
                 ls +P+a++++++ fnp+++v+llret +P
  KHJ34947.1 937 LSLIPRAEYYTSTKFNPSAMVRLLRETIVP 966
                 *************************99887 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   5.8e-09   1.7e-05       4      61 ..     234     289 ..     231     294 .. 0.91
   2 ?    1.6   0.0      0.16   4.7e+02      20      57 ..     716     750 ..     714     760 .. 0.86

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 5.8e-09
      TPR_16   4 araalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAa.alyraal 61 
                  ++++ +++ d+A+a++e++ k +   P+aae++ ++ ++ l++ ++++A+  + r++l
  KHJ34947.1 234 IKEHRSRNRLDEARAVYERFFKVF---PQAAEMWVAYIEMELENDNFTAAEtIFGRSLL 289
                 5678889*****************...************************99988876 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.16
      TPR_16  20 leaalkrdpssPdaaeAllllgdaalrqgrlaeAaaly 57 
                 +e+  k++   P++a++ l++   +l  g+ + A+  +
  KHJ34947.1 716 FERGAKLF---PEDADFTLEYLKHLLSIGDTTNARVTF 750
                 7889999*...*******************99998444 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.1     2e-06    0.0058       2      43 ..     228     269 ..     227     270 .. 0.94
   2 !    5.8   0.0    0.0098        29       2      36 ..     262     296 ..     261     304 .. 0.85
   3 ?    2.8   0.0      0.09   2.7e+02      22      42 ..     714     734 ..     694     763 .. 0.88
   4 ?   -2.1   0.0       3.5   1.1e+04      25      36 ..     792     803 ..     770     809 .. 0.69

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 2e-06
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 +a+  l + ++ + ++deA+a+++r  + +P+ ae w ++ +
  KHJ34947.1 228 DAWITLIKEHRSRNRLDEARAVYERFFKVFPQAAEMWVAYIE 269
                 6899999******************************99976 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0098
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddae 36 
                 e++ a+ e +l+++++ +A++++ r l + P+ a 
  KHJ34947.1 262 EMWVAYIEMELENDNFTAAETIFGRSLLTVPNVAL 296
                 89************************999998544 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.09
      TPR_14  22 allrralalaPddaeawllla 42 
                 ++++r  +l+P+da++ l++ 
  KHJ34947.1 714 KIFERGAKLFPEDADFTLEYL 734
                 789999999999999998875 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 3.5
      TPR_14  25 rralalaPddae 36 
                 +r+ +l+Pdd+ 
  KHJ34947.1 792 QRIAELFPDDPK 803
                 677789999986 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   3.9e-06     0.012       4      62 ..     240     297 ..     237     301 .. 0.90
   2 !    6.1   0.0    0.0052        16      12      55 ..     714     757 ..     711     768 .. 0.88

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 3.9e-06
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddarya 62 
                 +++++eA a +e+ ++  p+ ae + +++e  l++ ++++Ae +  + ++  p+  +++
  KHJ34947.1 240 RNRLDEARAVYERFFKVFPQAAEMWVAYIEMELENDNFTAAETIFGRSLLTVPN-VALW 297
                 5789*****************************************999999998.4444 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0052
      TPR_19  12 alleqalqedpknaearllLAeallalgqldeAealLdalpeed 55 
                 +++e+  +  p++a+  l + + ll+ g+++ A+ + +++    
  KHJ34947.1 714 KIFERGAKLFPEDADFTLEYLKHLLSIGDTTNARVTFETVVSRL 757
                 689999999***************************99987665 PP

>> HAT  HAT (Half-A-TPR) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.2   7.4e-05      0.22       4      20 ..     244     260 ..     242     271 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 7.4e-05
                 HHHHHHHHHHHHHS--H CS
         HAT   4 dRAReiYeRFvvVHpeV 20 
                 d AR +YeRF  V p+ 
  KHJ34947.1 244 DEARAVYERFFKVFPQA 260
                 78***********9764 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1       1.6   4.7e+03      95     114 ..     383     402 ..     362     432 .. 0.65
   2 ?   10.1   4.3    0.0003      0.89      51     109 ..     575     635 ..     522     645 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.6
      APG6_N  95 eeeeerfwreynelqlelle 114
                     ++ w+ey ++++ l++
  KHJ34947.1 383 MSTLNAIWKEYDQFEMSLNK 402
                 44455566666666666554 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.0003
      APG6_N  51 eleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeee..rfwreynelq 109
                  l + +++l+  e++ l++L+e  + ++++ a ++++eee+e+ + e++  + ++e ++++
  KHJ34947.1 575 TLYDMIKQLKTREARDLAKLEESTALDASISAIISKAEEEEEESDSEKQarEAVKETQAKA 635
                 334449*******************************999999888775114455555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1058 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1340  (0.0747392); expected 358.6 (0.02)
Passed bias filter:                      706  (0.0393775); expected 358.6 (0.02)
Passed Vit filter:                        70  (0.00390429); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.88u 0.29s 00:00:01.17 Elapsed: 00:00:00.46
# Mc/sec: 6882.96
//
Query:       KHJ34948.1  [L=163]
Description: putative ibr finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       999  (0.0557198); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1216.52
//
Query:       KHJ34949.1  [L=545]
Description: putative g protein-coupled receptor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-53  181.6   5.5    1.1e-53  181.6   5.5    2.4  2  ABA_GPCR  Abscisic acid G-protein coupled receptor
    4.5e-21   74.7   0.4    1.2e-19   70.1   0.0    2.6  2  GPHR_N    The Golgi pH Regulator (GPHR) Family N-terminal
  ------ inclusion threshold ------
      0.053   13.6   1.6       0.06   13.4   0.1    1.9  2  DUF2730   Protein of unknown function (DUF2730)


Domain annotation for each model (and alignments):
>> ABA_GPCR  Abscisic acid G-protein coupled receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.6     0.055   3.3e+02      62     101 ..      91     131 ..      23     154 .. 0.83
   2 !  181.6   5.5   1.9e-57   1.1e-53       2     179 ..     336     519 ..     335     520 .. 0.96

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.055
    ABA_GPCR  62 kldlealsrqiSll.Lsgvlllaslssvlttissllrllps 101
                 +ld+ + + +iSl+ +++ l+l+ +s+ l  + ++ ++ ++
  KHJ34949.1  91 RLDALTFATTISLAaVLAELILCEISNALDPVARAYAFKSI 131
                 56777778889986366779999999999888877766554 PP

  == domain 2  score: 181.6 bits;  conditional E-value: 1.9e-57
    ABA_GPCR   2 rsstllgkllkvl.gvvfaiYCvyrilktllnllpriil........sssssDplavtlaklllrhfdlkldlealsrqiSllLsgvlllaslssvltt 91 
                 r+s+ lgk+++++ +++f+iYC++ril+t+l+ ++++++        +s ++Dp++++l++++ +h+d++l++ a+srqiS+lLsg++llas++svltt
  KHJ34949.1 336 RASSRLGKTVIMPaSFGFSIYCIFRILSTILTNIRILVFsypsmaahNSPNTDPINRILSLMA-KHIDPTLNRLAWSRQISILLSGFILLASFNSVLTT 433
                 788999999999879******************999888*******98899************.*********************************** PP

    ABA_GPCR  92 issllrllpsslqllkssllnLllselmgiYvistllllrsnLPkevssklselLgekptvpnvidrwFDkvFllsciltavvilvae 179
                 +++l++l+ps l+ +++++ +Ll++++ ++Yvis++lllrsnLP+e++s ++e+Lg+  + p +++rwFD++Fll+ + ta++i+ ++
  KHJ34949.1 434 FHMLTKLSPSLLH-QAQANQALLIAQISATYVISSALLLRSNLPNEMKSIVNEALGSP-LDPVFVERWFDTWFLLATAGTALGIWTSR 519
                 ************6.7******************************************9.7777**********************987 PP

>> GPHR_N  The Golgi pH Regulator (GPHR) Family N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.1   0.0     2e-23   1.2e-19       2      68 .]     205     271 ..     204     271 .. 0.97
   2 ?    1.9   0.1     0.039   2.3e+02      21      43 ..     417     441 ..     415     464 .. 0.64

  Alignments for each domain:
  == domain 1  score: 70.1 bits;  conditional E-value: 2e-23
      GPHR_N   2 glieavlsrvsviGvtlmAiLSGfGavstpyetfslfkrpvteadinslearlehtrellaekrkel 68 
                 gl+ a+l+rv++iG+ lmA+ SGf+avs++++tf +++r v+eadi++++a l++++el+++k+ +l
  KHJ34949.1 205 GLTAACLERVGIIGIALMALMSGFAAVSAVWHTFGVKTRIVSEADISRKQADLDAINELFVDKQNQL 271
                 6899***********************************************************9885 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.039
      GPHR_N  21 iLSG...fGavstpyetfslfkrpvt 43 
                 +LSG    ++ +++ +tf ++++  +
  KHJ34949.1 417 LLSGfilLASFNSVLTTFHMLTKL-S 441
                 699977779999999999996322.2 PP

>> DUF2730  Protein of unknown function (DUF2730)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.2       1.4   8.1e+03       6      21 ..      21      36 ..      19      39 .. 0.82
   2 ?   13.4   0.1     1e-05      0.06      30      92 ..     252     309 ..     223     331 .. 0.69

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.4
     DUF2730  6 nwglilavisvvvavi 21
                 w+l+l++i ++v+ +
  KHJ34949.1 21 IWSLVLSLIPFIVTFF 36
                6999999999998876 PP

  == domain 2  score: 13.4 bits;  conditional E-value: 1e-05
     DUF2730  30 akredleklaekveendkrlteletkvenLPtakdlekLkllladlrgelkaleaevrqlshq 92 
                  k+ dl  ++e   +++++l +l+ k +++Pt++    Lk+ l ++rg++++  +e++++++ 
  KHJ34949.1 252 RKQADLDAINELFVDKQNQLRSLQRKTKDMPTEDY---LKKYLGNIRGNSDT--QEIQSIEKE 309
                 377899999999*********************86...56778888886653..334444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (545 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.37
# Mc/sec: 4415.64
//
Query:       KHJ34950.1  [L=475]
Description: putative eukaryotic translation initiation factor 3 subunit l [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.2e-153  511.9   0.1   1.4e-153  511.7   0.1    1.0  1  Paf67     RNA polymerase I-associated factor PAF67
  ------ inclusion threshold ------
      0.051   13.4   0.0      0.094   12.6   0.0    1.4  1  DUF1421   UBA-like domain (DUF1421)
      0.087   13.0   0.0       0.45   10.8   0.0    2.2  2  TPR_2     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> Paf67  RNA polymerase I-associated factor PAF67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  511.7   0.1  2.4e-157  1.4e-153       3     404 ..      77     473 ..      75     474 .. 0.97

  Alignments for each domain:
  == domain 1  score: 511.7 bits;  conditional E-value: 2.4e-157
       Paf67   3 veSwenYceLfnlllnesespveleLp.nqWlwDiidEFvYQFqsfcqyrsklkkk..seeelkalkeensqvwsvesvlnvLhslvqkskineqleae 98 
                 ++S++n+c+Lf+++ln s++pv+le p n W wDiidEF+YQF+sfc+yr++++++  s+ee+++l +e +++w ++svlnvL+sl+q+s+ineql+a 
  KHJ34950.1  77 INSYDNFCSLFHFILN-SDGPVQLEPPtNYWAWDIIDEFIYQFNSFCTYRNRVARQgsSNEEIQIL-REAPNTWGCYSVLNVLYSLIQRSQINEQLAAI 173
                 89**************.********77369*********************9997744669****9.7889**************************** PP

       Paf67  99 kegkeeeevagefgssplykmLgyFsligllrvhvllGdYttalkvlenidlskkallskvpaahvsllYyvGfaylmlrrYkDAirtlsqillyisrt 197
                 k+++++ +vag++gs+ply+ LgyFs+igllrvh+llGd+++alk+l++i+l+kka++++v+aah++++YyvGf+y+m+rrY+DAir++s+il+y+srt
  KHJ34950.1 174 KRDEDPMAVAGDYGSKPLYQLLGYFSIIGLLRVHCLLGDFSLALKTLDDIELNKKAMFARVMAAHFTTYYYVGFSYMMMRRYTDAIRMFSHILIYVSRT 272
                 *************************************************************************************************** PP

       Paf67 198 kqyqsrsyqsdqinkqadrmyaLlaiclalspskldesilqqlkekyseklsklqk...edeeafeelFskacPkfispaapdledaeaeedansekea 293
                 k++ +++ q+d+i+k++d+myaL+aic+a+ p++lde i+ +l+eky+++l klq+   +++ +feelF+ acPkfisp++pd++++e +       ++
  KHJ34950.1 273 KNF-QKNAQYDSITKKNDQMYALIAICVAFNPTRLDEIISIALREKYGDQLLKLQRgglDSLPIFEELFRSACPKFISPTPPDFDNPELD------VDP 364
                 **8.89**************************************************8888889***********************9754......8** PP

       Paf67 294 lkrqlklFlkevkqqkklptlrsylkLYttislekLasllevdeeelrsqLlslkhksrqlkwkkgsaslldgesvsasdldfyidedmihiaetkvqr 392
                 ++++l +F++evk++   p ++syl+LYtt++l+kLa +lev+ ++lr++Ll+ k++srq+kw+++   lldg+ ++++dld+ +++d+ihi+e+kv r
  KHJ34950.1 365 VEHHLFIFMDEVKNNMWSPIVKSYLRLYTTMDLKKLAGFLEVEPDQLRAWLLVNKQRSRQIKWSEN--GLLDGDLITSNDLDYAMQGDLIHISEAKVGR 461
                 ***************************************************************996..9****************************** PP

       Paf67 393 rygdyFlkqiek 404
                 +  d++l+++++
  KHJ34950.1 462 KLIDWYLRNLAR 473
                 ********9876 PP

>> DUF1421  UBA-like domain (DUF1421)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   1.6e-05     0.094      17      39 ..      52      74 ..      49      79 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.6e-05
     DUF1421 17 qVrsvvqrmveaGqpvDfNvvlD 39
                q + +  r+ +a+qp DfN+ lD
  KHJ34950.1 52 QADDIQARLIAAAQPLDFNATLD 74
                5667778*************999 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.95   5.7e+03      10      22 ..     206     218 ..     205     221 .. 0.78
   2 ?   10.8   0.0   7.5e-05      0.45       3      25 ..     241     263 ..     239     268 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.95
       TPR_2  10 ayyklgdyeeAle 22 
                 ++  lgd+  Al+
  KHJ34950.1 206 VHCLLGDFSLALK 218
                 5778999999987 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 7.5e-05
       TPR_2   3 alynlGlayyklgdyeeAleafe 25 
                  +y+ G +y+ + +y +A++ f 
  KHJ34950.1 241 TYYYVGFSYMMMRRYTDAIRMFS 263
                 69*****************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (475 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      393  (0.0219198); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.38
# Mc/sec: 3748.25
//
Query:       KHJ34951.1  [L=214]
Description: putative tat pathway signal sequence [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-47  162.6   0.0    1.4e-47  162.4   0.0    1.0  1  DUF3328   Domain of unknown function (DUF3328)


Domain annotation for each model (and alignments):
>> DUF3328  Domain of unknown function (DUF3328)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.4   0.0   7.6e-52   1.4e-47      62     220 .]      27     189 ..      13     189 .. 0.94

  Alignments for each domain:
  == domain 1  score: 162.4 bits;  conditional E-value: 7.6e-52
     DUF3328  62 kqfklgskeapsiyrgepspevdaaW.ddllkleailipreelrrlgkdpaaelevedkseggyiaglevfHqLHCLnllrkalypeyygypglsegee 159
                  qf+ gs+ +++ +r + spevdaaW + +++++a+ +p+  ++++g +p ++++++++++ggy+a++e +H+LHCLnl+r+aly++ ++y ++++g++
  KHJ34951.1  27 IQFN-GSFLKENVFRLPASPEVDAAWeSLGVNYRAVTVPPILAEKAGLKP-SQVQINPAYGGGYPANVEGLHHLHCLNLVRQALYYNIDYYRSAGKGAF 123
                 4566.9********************9999********************.************************************999999999998 PP

     DUF3328 160 ee....drvHleHCidiLrqsimChaDvtlitfnwvkg.tkgpvpdfntehqCrdfealldWaeen 220
                  +     r+H++HC+diLrq++mC+ +++l+++ w+++  +++++dfnteh+Cr+++++++Wa+++
  KHJ34951.1 124 VNndhiVRLHVSHCLDILRQQLMCSPNTALLGQIWWDRkAPKAFVDFNTEHKCRNYDTIREWAKKR 189
                 8888889************************9999998799**********************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (214 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       282  (0.0157287); expected 358.6 (0.02)
Passed bias filter:                      269  (0.0150036); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1711.82
//
Query:       KHJ34952.1  [L=377]
Description: putative nad dependent epimerase dehydratase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.1e-17   61.9   0.0      8e-17   61.5   0.0    1.1  1  Epimerase        NAD dependent epimerase/dehydratase family
    1.3e-08   34.3   0.0    1.9e-08   33.8   0.0    1.2  1  RmlD_sub_bind    RmlD substrate binding domain
     0.0031   16.6   0.0      0.015   14.3   0.0    2.0  1  3Beta_HSD        3-beta hydroxysteroid dehydrogenase/isomeras
  ------ inclusion threshold ------
      0.021   14.2   0.0      0.029   13.8   0.0    1.2  1  GDP_Man_Dehyd    GDP-mannose 4,6 dehydratase
      0.029   14.5   0.0       0.06   13.4   0.0    1.4  1  Ldh_1_N          lactate/malate dehydrogenase, NAD binding do
      0.071   13.4   0.0       0.12   12.6   0.0    1.4  1  Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding doma


Domain annotation for each model (and alignments):
>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.5   0.0   2.7e-20     8e-17       1     230 [.       7     235 ..       7     250 .. 0.89

  Alignments for each domain:
  == domain 1  score: 61.5 bits;  conditional E-value: 2.7e-20
                 EEEETTTSHHHHHHHHHHHHCT..SEEEEEES-STTTTCHHCHHC........EEEE--TT-HHHHHHHHHHH...T-SEEEE--S---HHHHHHSHHH CS
   Epimerase   1 ilVtGatGfiGsalvkallekg..yevigldrlssasntarledl........elveldltdrsalerlfkee...qpdavihlAavggvaassedpad 86 
                 +l++G+ G++G+ l+ ++ +++   ev  +d++    +   l+          +++++d  ++s+l r+f ++   q d+v+++   gg  ++s+d + 
  KHJ34952.1   7 VLIIGGMGYVGRFLALYIHQNQlaSEVRLVDKK--LPQLVWLAPEfdeacsndKFMQADAGKESSLPRIFGRKngkQWDYVFNC---GGETQNSQDDEV 100
                 79********************9778****999..3333333333689**********************8765669*******...778888888888 PP

                 HHHHHTHHHHHHHHHHHHHTCTEEEEEEEGGGGTSCSSSSBSTCSTTS----SSHHHHHHHHHHHHHHHHHHHHT-EEEEEEESEEESTTS-TTSTTSH CS
   Epimerase  87 fieknlqgtlnlleaarkagvkrllflsSsevYGkdaeqpkeettltgplkpnspYaaaKlageklveayaaqyglnaiilrlfnlyGprngegevsrv 185
                 +  + l+++ ++ ++a k+g+k ++ ls+ +vY  d + p +e+    +lkp +  aa Kl +e+++ ++    gl  ii r+  +yG++   ++ +++
  KHJ34952.1 101 YRARSLALSITIGKEAAKRGIKAFVELSTGAVYKSDSR-PSKEDG---KLKPWNQIAAFKLQAEEQLAKI---DGLCLIIARIAYIYGEY-TSKFAAHF 191
                 8899******************************9999.988888...99***************99987...7999*************.88889999 PP

                 HHHHHHHHHTTSSSEEEETTST-EEEEEEHHHHHHHHHHHHHHHT CS
   Epimerase 186 ipalirkilegkqevtllgdgtalRdflyveDvaeaillvlehvd 230
                 +  +  + + g+ e++ l + + +   +++ Dv +a++++++ ++
  KHJ34952.1 192 LVLARVHQHFGE-ELKWLWTKDLKVNTVHIIDVTRALWAMADWYA 235
                 886666666688.9999999********************98765 PP

>> RmlD_sub_bind  RmlD substrate binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.8   0.0   6.4e-12   1.9e-08       3     171 ..       7     199 ..       5     202 .. 0.82

  Alignments for each domain:
  == domain 1  score: 33.8 bits;  conditional E-value: 6.4e-12
                    EEEESTTSHHHHHHHHHCTTTSE..EEEEE-TT.....................T--TTSHHHHHHHH...HHH--SEEEE------HHHHHHSHH CS
  RmlD_sub_bind   3 ilvtGanGqlGseLakqlaeegl..evlaltre.....................eldltdaeavaell...keakpdvvvnaAAytavDkaEseee 72 
                    +l++G+ G +G+ La  +++++l  ev  ++++                     ++d  +++++ +++   + ++ d v n++  t+     s+ +
     KHJ34952.1   7 VLIIGGMGYVGRFLALYIHQNQLasEVRLVDKKlpqlvwlapefdeacsndkfmQADAGKESSLPRIFgrkNGKQWDYVFNCGGETQN----SQDD 98 
                    788899999998887777665531134444555889999999999999999999999999999999996655567789******9986....5566 PP

                    HHHHHHTHH.HHHHHHHHHHCT-E.EEEEEEGGGS-S-TTS-B-TTS----SSHHHHHHHHHHHHHHH.H-SSEEEEEE-SEESSSSS-HHHHHHH CS
  RmlD_sub_bind  73 aayavnaea.vealAeaaaavgal.LihvStDyVFdGekkrpYeeddetsPlnvYGrtKlaGEqavla.agkkalivRtswvygekgknfvktmlr 165
                    + y++ + a + ++ ++aa++g++ ++ +St  V+  + +rp +ed + +P n  ++ Kl+ E+  ++ +g   +i R++++yge+   f++ +l 
     KHJ34952.1  99 EVYRARSLAlSITIGKEAAKRGIKaFVELSTGAVYKSD-SRPSKEDGKLKPWNQIAAFKLQAEEQLAKiDGLCLIIARIAYIYGEYTSKFAAHFLV 193
                    666666655256899*******8549**********99.8999********************99999788899999******************9 PP

                    HHHH-S CS
  RmlD_sub_bind 166 lakere 171
                    la+ ++
     KHJ34952.1 194 LARVHQ 199
                    998665 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0     5e-06     0.015       1     196 [.       8     194 ..       8     206 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5e-06
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrleelkevrvlDlresp..elleel.skvnvkkviegDvtdkdkleeal...egvdvvihlaslvdvagkltedeimkv.n 92 
                 +++Gg+G++Gr l   + + + + evr +D++  +  +l  e+ + + ++k++++D  ++++l +     +g +   +  +  + ++ + +de++++  
  KHJ34952.1   8 LIIGGMGYVGRFLALYIHQNQLASEVRLVDKKLPQlvWLAPEFdEACSNDKFMQADAGKESSLPRIFgrkNGKQWDYVFNCGGETQNSQ-DDEVYRArS 105
                 69**********9988888888********65443114444441456677799***999999988763334555555555666666544.444444414 PP

   3Beta_HSD  93 vkGTrnvleacvkagvrvlvYtSsaevvgpnslgeeilngdEeleyeslhqdaypesKalaEklvlkaNgrtlknggrlyTcaLRpagiyGegdkllvp 191
                 +    ++ + + k g++++v  S+  v ++     + + ++E+ +   ++ +  + +K +aE+ + k  g        l+ +  R a+iyGe+ +++ +
  KHJ34952.1 106 LALSITIGKEAAKRGIKAFVELSTGAV-YK----SDSRPSKEDGK--LKPWNQIAAFKLQAEEQLAKIDG--------LCLIIARIAYIYGEYTSKFAA 189
                 555666667888888888888877544.44....23333445444..44555667888888888887777........788888888888888877766 PP

   3Beta_HSD 192 llkql 196
                  +  l
  KHJ34952.1 190 HFLVL 194
                 65555 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   9.7e-06     0.029       1     197 [.       8     192 ..       8     239 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 9.7e-06
                    EEETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHHH...T-SEEEE--S---HHHHTT CS
  GDP_Man_Dehyd   1 LiTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlakdpkeeleenlklhkgDltDssslerllaev...qpdevynLAAqshVdvsfe 93 
                    Li G+ G++G +la ++ +++    +   ++++ ++  ++   ++    + +n k++++D   +ssl r++ +    q d v+n +++   ++s +
     KHJ34952.1   8 LIIGGMGYVGRFLALYIHQNQLASEVRLVDKKLPQLVWLAPEFDE----ACSNDKFMQADAGKESSLPRIFGRKngkQWDYVFNCGGET--QNSQD 97 
                    89****************997666555555666666666665542....346889****************88656699*9***99986..78999 PP

                    SHHHHHHHHTHHHHHHHHHHHHCT..TTSEEEEEEEGGGG-S-SSSSB-TTS-----SHHHHHHHHHHHHHHHHHHHH---EEEEEE-EEESTTS- CS
  GDP_Man_Dehyd  94 kPeytaevnvlGtlrLLeairalglekkvrfyqaStsEvYGkvqevpqtEttpfyPrsPYaaaKlyadwivvnyreayglfavngilfnhesprrg 189
                    +  y a+  +l  +   ea+++ g++    f+  St  vY k ++ p +E+ +++P +  aa Kl a+    +     gl  +++++   ++ +  
     KHJ34952.1  98 DEVYRARSLALSITIGKEAAKR-GIK---AFVELSTGAVY-KSDSRPSKEDGKLKPWNQIAAFKLQAEEQLAK---IDGLCLIIARIAYIYGEYT- 184
                    9999999999999888899987.654...79*********.566799************99999999976654...4566666666666666663. PP

                    TTSCCCHH CS
  GDP_Man_Dehyd 190 etfvtrki 197
                     +f  + +
     KHJ34952.1 185 SKFAAHFL 192
                    44544444 PP

>> Ldh_1_N  lactate/malate dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0     2e-05      0.06       3      34 ..       7      38 ..       6      52 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2e-05
                EEEETTTSHHHHHHHHHHHHTTSSSEEEEE-S CS
     Ldh_1_N  3 vavvGaaGgiGqslalllankkladelaLlDi 34
                v ++G  G +G  lal + +++la+e++L+D 
  KHJ34952.1  7 VLIIGGMGYVGRFLALYIHQNQLASEVRLVDK 38
                7899999***********************96 PP

>> Sacchrp_dh_NADP  Saccharopine dehydrogenase NADP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   4.2e-05      0.12       1      64 [.       7      71 ..       7      97 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.2e-05
                     EEEE--.SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHH..TTTCEEEEE--TTTHHHHHH CS
  Sacchrp_dh_NADP  1 vliiGa.GsvGqavaellarhfdvdaeitvadrskeklealaaka..lgvrfeaialdaenyeavLa 64
                     vliiG+ G+vG+++a ++++++   +e+ ++d+++ +l  la +   + ++ ++++ da ++++ L 
       KHJ34952.1  7 VLIIGGmGYVGRFLALYIHQNQLA-SEVRLVDKKLPQLVWLAPEFdeACSNDKFMQADAGKESS-LP 71
                     89******************9866.5******99988655554444444444555555555555.55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 2963.13
//
Query:       KHJ34953.1  [L=289]
Description: putative f-actin capping protein beta subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.9e-99  331.1   0.0      5e-99  330.8   0.0    1.1  1  F_actin_cap_B  F-actin capping protein, beta subunit


Domain annotation for each model (and alignments):
>> F_actin_cap_B  F-actin capping protein, beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  330.8   0.0  2.8e-103     5e-99       2     238 .]       8     256 ..       7     256 .. 0.94

  Alignments for each domain:
  == domain 1  score: 330.8 bits;  conditional E-value: 2.8e-103
  F_actin_cap_B   2 daaldllrrlppkkveknlenlielvpdlaedllssvdqplkvakdkeegkeyllcdyNrdgdsYRSpwsnkY..............dpele.... 79 
                    + aldllrrl+pk+v+++l++li+lvp+l+edllssvdqpl++a+++++g+eyllcdyNrdgdsYRSpws+++              d        
     KHJ34953.1   8 ERALDLLRRLDPKHVTTHLNSLISLVPSLTEDLLSSVDQPLDIATCSKTGREYLLCDYNRDGDSYRSPWSGEFenllggigqggideD---Gnneg 100
                    679**********************************************************************666666665555441...04445 PP

  F_actin_cap_B  80 ..dglvpseklrklEieaneafdeYrelYYeggvssvYlwdlddegfagvvllkkeakeskeekkgswdsihvvevkeeesskkkaeYkltstvil 173
                      +g+vpse+lrk+Ei+aneafd+YrelYYeggvssv++wdldd gfagvvllkk a+++  + +g+wdsihv+e++++   ++ a+Y ltstv l
     KHJ34953.1 101 agEGAVPSERLRKMEIKANEAFDIYRELYYEGGVSSVFFWDLDD-GFAGVVLLKKVATPTG-KAQGTWDSIHVFEAVDR---ARVAHYCLTSTVNL 191
                    567****************************************9.************9988.9*************999...5789********** PP

  F_actin_cap_B 174 slkkkkkkagelslsgsltrqlekelkledesshianiGklvedmenklrnllqevYfgktkdiv 238
                     l++ ++  ge++lsg++tr++e++l+++++sshi niGklvedme ++rnllqevYfgk+kd+v
     KHJ34953.1 192 YLSTGSDILGEMDLSGNMTRHIESDLPVDNDSSHILNIGKLVEDMELNMRNLLQEVYFGKAKDVV 256
                    ***************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2177.94
//
Query:       KHJ34954.1  [L=1093]
Description: putative vacuolar protein sorting 33a-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.6e-75  254.5   0.0    1.4e-64  219.0   0.0    2.3  2  Amino_oxidase  Flavin containing amine oxidoreductase
    4.1e-14   52.7   0.2    1.2e-13   51.1   0.0    2.0  2  SWIRM          SWIRM domain
    2.4e-07   31.1   7.1      1e-05   25.8   4.3    2.9  2  HMG_box        HMG (high mobility group) box
    3.2e-07   30.8   1.8    3.2e-07   30.8   1.8    2.2  2  HMG_box_2      HMG-box domain
    4.1e-07   30.1   0.0    1.1e-06   28.8   0.0    1.7  1  NAD_binding_8  NAD(P)-binding Rossmann-like domain
     0.0043   16.7   0.0      0.014   15.0   0.0    1.9  1  DAO            FAD dependent oxidoreductase
  ------ inclusion threshold ------
       0.02   14.2   0.0      0.053   12.7   0.0    1.6  2  Pyr_redox_2    Pyridine nucleotide-disulphide oxidoreductase
      0.085   13.2   0.1       0.49   10.8   0.0    2.3  2  POPLD          POPLD (NUC188) domain


Domain annotation for each model (and alignments):
>> Amino_oxidase  Flavin containing amine oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.1   0.0   1.6e-11   3.6e-08       1      60 [.     329     416 ..     329     470 .. 0.85
   2 !  219.0   0.0   6.4e-68   1.4e-64     159     452 .]     597     897 ..     579     897 .. 0.93

  Alignments for each domain:
  == domain 1  score: 33.1 bits;  conditional E-value: 1.6e-11
                    HHHHHHHHHH...........HHTT...EEEEEEESSSSSBTTS-EEEET..........T..EEEESS--EEET..TTHHHHHHHHH CS
  Amino_oxidase   1 laGLaaArqL...........lsaG...fdVtvlEardrvGGRirtvrsd..........G..ylielGamwftg..agnpllellke 60 
                    ++GL +ArqL           ++ G   ++V+++E+r+r+GGRi+++ +           G  y++e+G+m++tg   gnpl  +++ 
     KHJ34954.1 329 MSGLGCARQLeglflqfedrfHELGedlPQVVIVEGRNRIGGRIYSRALItkpkyptldfGsrYTAEMGGMIITGfdRGNPLNVIVRS 416
                    8*****************999888888********************9998899999988356*************988888777765 PP

  == domain 2  score: 219.0 bits;  conditional E-value: 6.4e-68
                    HHHHHHHHHHHHHHHHCHTSTTTTCBHHHHTCCCCHHHHHTSCCCEETTHTHHHHHHHHHTTTTEEEETSEEEEEEEE.......ETTCEEEEETT CS
  Amino_oxidase 159 rliepelfaklefasglfagdpselsaklalpllwelegfggslllprgGlsqlpealaeelrgldirlntrVkeikr.......egdgvtvtled 247
                    rli+ ++ a+le+++++      +  ++l  ++l++ ++ +g +++++gG++q+p+ l +   +l+ir n+ Vk+i +       ++ + +++++d
     KHJ34954.1 597 RLIN-WHVANLEYSNAI-----TCNKLSLGGWDLDAGNEWEGKHTMVTGGYQQVPRGLFRCPQPLTIRKNSTVKRIIYndrlhgsNNPKARIECQD 686
                    5555.999********9.....77889999**************************************************9997555568898888 PP

                    STEEEESEEEE-S-HHHHH..SSEEESCCSHHHHHHHHHSEEEEEEEEEEEESSGGSGCSTSE.CE..........CECCCEEETTTEEEEECCEC CS
  Amino_oxidase 248 gevveaDaVvvTvplgvlk..ailfsPplpdekaeairnlgfgsvnkvilefdrkfwednalg.qg..........vlvseltttlgeafissdfp 330
                    g   eaD +v+T+plgvlk   i+f+P lp++k  ai+++g+g++nk+il + + fw++n  + +g           + ++  + +g+ f +  f+
     KHJ34954.1 687 GII-EADCIVSTIPLGVLKqqSIQFEPALPEWKKGAIQRIGYGVLNKIILVYSEVFWDPNR-DiFGtlrspqnrnsLDQKDYFSQRGRFFQW--FN 778
                    885.*******************************************************98.444444445567778888888888888888..** PP

                    CCSTTTEEEEEEEEECHHHHHHHTTS-HHHHHHHHHHHHHHHHTGTSSTCSEEEEEECCTETTTSSSEEE.BTTHHHHHHHHHHCHHCSTTEEE.S CS
  Amino_oxidase 331 srappgkglvllvyvggdaaneleslsdeelvqavlrdLrklfgeevpepkatlvtrWhtdplargsysyvsvgpghedydplakpegdprlffAG 426
                     ++++g +  ll++++g+aa   e+ +deel+++++ +L++lfg++ p p++++vtrW++d+++rgsysy  ++  ++dy+ +a+p  +++lffAG
     KHJ34954.1 779 VSSTSGLPT-LLALMAGEAAFATEKSTDEELLNEATTVLQTLFGPNLPTPIEAVVTRWGHDEYSRGSYSYTGPNFRPNDYEVMAQP--IGNLFFAG 871
                    *********.************************************************************99999***********..******** PP

                    GGGCTTTTTSHHHHHHHHHHHHHHHH CS
  Amino_oxidase 427 ehtsreypgtvegAilSGlraAaril 452
                    eht+ ++p+tv+gA+ SGlraA ++l
     KHJ34954.1 872 EHTCGTHPATVHGAYISGLRAASEVL 897
                    ***********************997 PP

>> SWIRM  SWIRM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.1   0.0   5.5e-17   1.2e-13       4      89 .]     219     298 ..     215     298 .. 0.94
   2 ?   -3.9   0.0         8   1.8e+04      46      62 ..    1011    1027 ..     997    1033 .. 0.64

  Alignments for each domain:
  == domain 1  score: 51.1 bits;  conditional E-value: 5.5e-17
       SWIRM   4 ewFdpdslhpiEkellselfngkdktpeeYlkiRnkiialyrenpkeyltvteaqkalkrrrltgidvnllsrihefLerwGlINf 89 
                 + ++p+slh++E e+l  ++++  ++ ++Yl+iRn i++l+ +np+ y++++ea  ++k    ++++++++s +he+L r G+INf
  KHJ34954.1 219 SRLNPYSLHKEEYEILRGHITH--QQVTTYLNIRNGILRLWIRNPTIYVELSEAIGCAK----DSRWFDVASLCHEWLIRGGFINF 298
                 66899***************76..89*********************************....778*******************8 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 8
       SWIRM   46 enpkeyltvteaqkalk 62  
                  e+   y+++ eaqk+++
  KHJ34954.1 1011 EDKLPYIKKAEAQKMAT 1027
                  34477889999977665 PP

>> HMG_box  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   4.3   4.6e-09     1e-05      25      69 .]     991    1035 ..     955    1035 .. 0.83
   2 ?    4.8   0.0     0.017        38      15      34 ..    1048    1068 ..    1039    1071 .. 0.70

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 4.6e-09
                  TS-HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     HMG_box   25 elknaeiskklgekWkalseeeKkkYeekaekekaryekekpeyk 69  
                  +++ +e++k++++ Wk+ see+K +Y++kae++k    +++ ey+
  KHJ34954.1  991 KINANEVKKMVAKLWKDTSEEDKLPYIKKAEAQKMATAAAMIEYN 1035
                  6889******************************99999998885 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.017
                  HHHHHHHHSTTS-.HHHHHHH CS
     HMG_box   15 qraklkaenPelk.naeiskk 34  
                   r+++k+enP+l   +ei+ +
  KHJ34954.1 1048 FREEYKKENPNLPsPNEIKNT 1068
                  577778888887767777665 PP

>> HMG_box_2  HMG-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   1.8   1.4e-10   3.2e-07       9      73 .]     964    1035 ..     955    1035 .. 0.92
   2 ?   -2.6   0.1         4     9e+03      52      71 ..    1039    1058 ..    1038    1059 .. 0.82

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 1.4e-10
                  -HHHHHHHTTHHHHHHH.......T---SSHHHHTGGGHHHHHHS-HHHHHHHHHHHHHHHHHHHH-SS--- CS
   HMG_box_2    9 nAYalfvqemipelkrk.......GnpviglaevsklcsekWkalseeeKekYeekAkedkkrydrealtyd 73  
                  n Y l+ +++++e+kr        G+  i+ +ev k + + Wk  see+K +Y +kA ++k +  + + +y+
  KHJ34954.1  964 NPYRLYSKDKWEEAKRLceegrrpGRGKINANEVKKMVAKLWKDTSEEDKLPYIKKAEAQKMATAAAMIEYN 1035
                  88**************99998888888**********************************99999988875 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 4
                  HHHHHHHHHHHHHHHH-SS- CS
   HMG_box_2   52 ekYeekAkedkkrydrealt 71  
                  ek+++ A + +++y++e+++
  KHJ34954.1 1039 EKWDKDALAFREEYKKENPN 1058
                  67888899999999999876 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8   0.0   4.9e-10   1.1e-06       1      55 [.     324     404 ..     324     415 .. 0.70

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 4.9e-10
                    EE--SHHHHHHHHHHH...........CC..TE.EEEEE-SSSSSSGGG-EECE...TT.........CEECTS---EEET CS
  NAD_binding_8   1 IvGaGlsGlvaAylLa...........ka..gf.dvlllekrdrlGGraasyev...pg.........vrvdygahifhgs 55 
                    ++GaG+sGl +A+ L            +   ++ +v+++e r+r+GGr++s+ +   p+         ++++ g  i++g+
     KHJ34954.1 324 VIGAGMSGLGCARQLEglflqfedrfhELgeDLpQVVIVEGRNRIGGRIYSRALitkPKyptldfgsrYTAEMGGMIITGF 404
                    8***************7777775543311224478*****************99877445223333445555555555555 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   6.2e-06     0.014       2      33 ..     322     369 ..     321     389 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 6.2e-06
                 EEEECTSHHHHHHHHHH...........HHTT.......EEEEESSSSTT CS
         DAO   2 vviiGGGiiGlstAyeL...........arrg.......Vtllekgdiag 33 
                 vv+iG+G+ Gl++A++L                      V+++e ++++g
  KHJ34954.1 322 VVVIGAGMSGLGCARQLeglflqfedrfH--ElgedlpqVVIVEGRNRIG 369
                 8****************555544433221..1337788999999998888 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   2.4e-05     0.053     136     179 ..     313     371 ..     302     379 .. 0.75
   2 ?   -4.3   0.0       3.7   8.2e+03     224     243 ..     469     488 ..     466     492 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 2.4e-05
                  HCCSS-TSEEEEES-SHHHHHHHHHH...........HHHT-...EEEEEESSSSSS.T CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxx...xxxxxxxxxxxx.x RF
  Pyr_redox_2 136 lklkllpkrivvvGgGyiGvElAaal...........aklgk...evtlveardrll.r 179
                  ++lk +++ +vv+G+G+ G+ +A +l           ++lg+   +v++ve r+r+  r
   KHJ34954.1 313 YSLKRKRRVVVVIGAGMSGLGCARQLeglflqfedrfHELGEdlpQVVIVEGRNRIGgR 371
                  5566667889***************75555555544466665999999***99999755 PP

  == domain 2  score: -4.3 bits;  conditional E-value: 3.7
                  CEEEESEEEE-S-EEES-HH CS
                  xxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 224 eeidadlvvvavGvrpstel 243
                  ++id d  ++ +G++p++e+
   KHJ34954.1 469 KTIDGDKALLDAGREPNSEG 488
                  57999999*********987 PP

>> POPLD  POPLD (NUC188) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       3.5   7.9e+03      23      65 ..      44      88 ..      34      91 .. 0.72
   2 ?   10.8   0.0   0.00022      0.49      13      74 ..     132     197 ..     129     200 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3.5
       POPLD 23 vrvgGlre..rrqlalesgkpyfPddypdtkagekeekeeeeeae 65
                   +Gl+e  ++   +e+++    +  pd +++++ e+  e++++
  KHJ34954.1 44 LNLMGLQEfdSHLSMFENSNIVRNFSTPDRSSNSTLEEIFENQEQ 88
                567899994334467888888888888888888887777776665 PP

  == domain 2  score: 10.8 bits;  conditional E-value: 0.00022
       POPLD  13 pfwlsLvrvg...vrvgGlrerrq.lalesgkpyfPddypdtkagekeekeeeeeaeekwerkPps 74 
                 ++w  L+ ++      +Gl+e+ + l+  s+k + P d+  ++  +ke++  +e+++ek++ +P+s
  KHJ34954.1 132 QVWPELNGNSvtpSSNLGLDEESSiLSSVSSKTTSPTDFETSSRVKKESTPPRENRREKYKIRPKS 197
                 67888888886667789***988868889***********************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1093 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      383  (0.021362); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.77u 0.24s 00:00:01.01 Elapsed: 00:00:00.41
# Mc/sec: 8079.95
//
Query:       KHJ34955.1  [L=113]
Description: putative small nuclear ribonucleoprotein sm d1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.1e-10   38.1   0.3    1.2e-09   37.7   0.3    1.2  1  LSM              LSM domain


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.3   6.9e-14   1.2e-09      18      66 ..       8      55 ..       3      56 .. 0.95

  Alignments for each domain:
  == domain 1  score: 37.7 bits;  conditional E-value: 6.9e-14
                SEEEEEEEEEEETTSEEEEEEEEEEETTETEEEEEEEEEEEGGGEEEEE CS
         LSM 18 grelrGtLkgfDqfmNlvLedveetlkdkkekrklglvliRGnnivlis 66
                g+ + Gt+++++++mN  L+ v++t+++   + +l+++++RG++i++ +
  KHJ34955.1  8 GTIIHGTITSVSPQMNTALRTVKMTQRGR-DTINLDTINLRGSTIRYYI 55
                899*************************9.****************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (113 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       303  (0.0169); expected 358.6 (0.02)
Passed bias filter:                      235  (0.0131073); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.33u 0.22s 00:00:00.55 Elapsed: 00:00:00.35
# Mc/sec: 967.14
//
Query:       KHJ34956.1  [L=250]
Description: putative n -glutamine methyltransferase mtq2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
     0.0025   17.6   0.0     0.0045   16.7   0.0    1.4  1  Methyltransf_16  Lysine methyltransferase
     0.0058   16.2   0.0     0.0094   15.5   0.0    1.3  1  MTS              Methyltransferase small domain


Domain annotation for each model (and alignments):
>> Methyltransf_16  Lysine methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0     5e-07    0.0045      36     106 ..      42     110 ..      14     114 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 5e-07
  Methyltransf_16  36 lake..lganelsklsvlELGsGtGlvGlavaellpeakviltDleellellkknielnknalkskvkvevLd 106
                       ++   + + + ++  v+E+GsG+G+v +++ ++  +++ il  ++ l+  +  ni + k a++++v+v +L+
       KHJ34956.1  42 FNQAndSSNINCKTPLVVEVGSGSGIV-ISFVHA--HCETILGRTDVLTAGIDVNIHACK-ATEKTVSVAELQ 110
                      3333224445666677*********99.666666..7********************977.999999998885 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.1e-06    0.0094      35     107 ..      58     143 ..      31     149 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.1e-06
                 EEEET-TTSHHHHHHHHHTT....C.E..EEEEESBHHHHHHHHHHHHHTTGC.......EEEEE-STTTTSTTS-EEEEEE---S CS
         MTS  35 vlDlGcGaGvlgaalakesp....eae..vtlvdvdarAlesakenleankle.......vevvasdvleeveekkfdlivsNPPf 107
                 v+ +G+G G++   + ++++    +++     +dv+ +A ++++++++  +l+       +  +  d++  +++k++dl++ NPP+
  KHJ34956.1  58 VVEVGSGSGIVISFVHAHCEtilgRTDvlTAGIDVNIHACKATEKTVSVAELQsvshgfyLGNILGDLTMFLKPKQVDLLIFNPPY 143
                 899999999765555554441111333325568**************999999887444444455666677789***********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (250 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.36
# Mc/sec: 2102.74
//
Query:       KHJ34957.1  [L=1760]
Description: putative cytokinesis protein sepa [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-78  264.0  12.8    2.2e-78  264.0  12.8    1.8  2  FH2       Formin Homology 2 Domain
    1.3e-64  217.2   0.0    1.3e-64  217.2   0.0    2.9  3  Drf_GBD   Diaphanous GTPase-binding Domain
    2.7e-51  174.0   4.0    2.7e-51  174.0   4.0    3.5  3  Drf_FH3   Diaphanous FH3 Domain


Domain annotation for each model (and alignments):
>> FH2  Formin Homology 2 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.4   0.2       1.3   7.9e+03     291     339 ..     869     913 ..     859     928 .. 0.67
   2 !  264.0  12.8   3.7e-82   2.2e-78       5     372 .]    1204    1595 ..    1201    1595 .. 0.95

  Alignments for each domain:
  == domain 1  score: -4.4 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHCCTTSSTT-THHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         FH2 291 glkklekelessekkeepsdkflevlkeflkeaeeklkkleeelkeake 339
                 +l++l++e+++       +d ++ + ++ +++a++kl + +++ +++ +
  KHJ34957.1 869 RLRALREEMQTTGA----QDSVTRKAQSTTRDADSKLTRGQSQIQKTVD 913
                 56666666666666....7777777777777777777777776666544 PP

  == domain 2  score: 264.0 bits;  conditional E-value: 3.7e-82
                  ---SS-B------EESSGGCTTSCCCCTCCHHHHC.........TSHHHHHHHHTBSC--HCCH......HCSCCTTCCESSS-HHHHHHHHHHHHH CS
         FH2    5 ikpkkkLkplhWdkvkpsqdrstvWdklkeesfek.........eldlseleelFsakekkkkkkksekskkskkkkkkvklLdpkrsqniaIlLkk 92  
                   +pkkkLk lhW++v+   ++   W+ +  +  ek         +++l+e+e+lFsake k+ +k+       +kk++k +++++++   ++I L k
  KHJ34957.1 1204 VRPKKKLKALHWERVDMPLKTH--WAIHLVSAAEKeekyaelsrKGVLEEVEKLFSAKEIKSLNKG------GQKKSDKKQIISSDLMRSFQISLAK 1292
                  68**************888876..66554444444456889*******************988866......999999******************* PP

                  H.TS-HHHHHHHHHTTTTCCCT.............HHHHHHHH.HHCGGHHHHHHH..HCTCTS..GTTB-HHH.HHHHHHTT.STTHHHHHHHHHH CS
         FH2   93 l.kltaeeiveaileldeeald.............lellenLl.kmaPtkeelkkl..keykge..vseLseae.qFllelvk.iprlekRleallf 168 
                  + + ++e+iv++i+++++e+ld             +++ en++   aP++ e++    ke + e  +seL++++ ++l++ ++ ++++++R++all+
  KHJ34957.1 1293 FsSYSVEKIVQMIIQCEKEVLDnpvvmeflqkedmCNMPENISkALAPYSREWTSNssKEIR-EldPSELTREDqIYLQTAFElNHYWKARMRALLL 1388
                  *******************************************889*********9643333.357******************************* PP

                  HHTHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSTCSTTCS-SEE-GGGGGGCCCSB-STTTSBHHHHHHHHHHTTSGGGGGHHH CS
         FH2  169 kstfeeeveelkrslealeaaseeLknskkfkklLeliLalGNymNdgtrrgqAkGFkLssLlkLsdvKstdnkttLLHylvkiireklpevldfss 265 
                    +fe+e+e+++++l+++ a+se+L+ns ++ ++L liL +GNymNd +  +qA+GFkLssL +Ls+vK+++n+ t+ ++l++i+r++++e+++f +
  KHJ34957.1 1389 TRSFESEFEDISSKLKQIVAVSESLRNSISLINILGLILDIGNYMNDVN--KQASGFKLSSLARLSMVKDAKNESTFADMLERIVRNQYSEWEGFVN 1483
                  ***********************************************88..9********************************************* PP

                  HTTTHHHCCTS-HHHHHHHHHHHHHHHHHHHHHHHHCCT....TSSTT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TT.CCHH CS
         FH2  266 eLknvkkaakvnleslekevkklekglkklekelessek....keepsdkflevlkeflkeaeeklkkleeelkeakelvkelveYfgedkk.evsp 357 
                  +++ v  a+k++++++ ++ +k+  ++k+++ +l+s++     k++p+d++ +v+ +++k+a+ k ++++  l++++  ++e++++fged+  e  +
  KHJ34957.1 1484 DISGVVTAQKLSVDQVIQDARKYVINIKNVQMSLDSGNLsdpkKFHPQDRVFQVVMRVMKDARWKAEQIQLYLENMMLVYDEIMRFFGEDPAdENAR 1580
                  ********************************************************************************************9**** PP

                  HHHHHHHHHHHHHHH CS
         FH2  358 eeffkilreFlkefk 372 
                  + ff++l++F++e+k
  KHJ34957.1 1581 RDFFAKLATFVEEWK 1595
                  ***********9986 PP

>> Drf_GBD  Diaphanous GTPase-binding Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.2   0.0   2.2e-68   1.3e-64       3     188 .]     259     472 ..     257     472 .. 0.97
   2 ?   -2.8   0.2      0.65   3.9e+03      15      34 ..     702     721 ..     694     784 .. 0.63
   3 ?   -1.1   0.5       0.2   1.2e+03      13      68 ..    1584    1632 ..    1573    1655 .. 0.65

  Alignments for each domain:
  == domain 1  score: 217.2 bits;  conditional E-value: 2.2e-68
     Drf_GBD   3 kpdeeeidklFeelleel...nlpeekreallalpiekKwqlvvqdkkkkakke................eklsksksksneeespesyvkklkddslk 82 
                   d++ i+++F  l++++   nlpe+++++++a+p+ekKw+lv+qd+ ++ ++e                +   +  ++s+ee+ pe++vkk+++++++
  KHJ34957.1 259 PNDDRFIEEEFLALMQKRgwhNLPEQAKRQMMAYPPEKKWTLVHQDRLTEYQGEqrrratmrgnmqqgqyGRDMEVMANSDEEGTPEWFVKKVMQNNIT 357
                 348999*************************************************************987667777889999***************** PP

     Drf_GBD  83 ekqlesLrVaLrtqplsWvkrFieleGlvaLlnvLskinekkaee.........eedlkkeyeiikClKalmNnkvGldavlahksvikllaqsldser 172
                  kql+sL+V+Lrtqp+ Wv++Fie++G+++L+nvL kin+++a++         e+d+++eyei+kClKa+mNn++G+d++lah++vi +la+sl s+r
  KHJ34957.1 358 AKQLQSLAVSLRTQPIGWVQTFIECQGQITLTNVLGKINRRQAQGpvpldgsisEKDHDREYEILKCLKAVMNNRYGADDALAHQQVIVALASSLISPR 456
                 *************************************************************************************************** PP

     Drf_GBD 173 lktrklvlelLtalcl 188
                 l+ rklv+e+Lt+lc+
  KHJ34957.1 457 LTSRKLVSEILTFLCH 472
                 ***************8 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.65
     Drf_GBD  15 elleelnlpeekreallalp 34 
                 +ll++l +++e+r+al +  
  KHJ34957.1 702 SLLDKLHTDSEARQALDEAM 721
                 56777777777776665432 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.2
     Drf_GBD   13 FeelleelnlpeekreallalpiekKwqlvvqdkkkkakkeeklsksksksneees 68  
                  F++l + ++  ++ re++++l++ +K++   +++k +a+k         ks  +e 
  KHJ34957.1 1584 FAKLATFVEEWKKSREKNIKLEAIQKRNELSMKRKNTAQKY-------DKSFDKEN 1632
                  55555555666788999999998888887777777777766.......22222223 PP

>> Drf_FH3  Diaphanous FH3 Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0      0.36   2.1e+03       1      23 [.     477     499 ..     477     501 .. 0.93
   2 !  174.0   4.0   4.5e-55   2.7e-51       2     195 .]     501     703 ..     500     703 .. 0.96
   3 ?   -0.8   1.4      0.17     1e+03     119     181 ..     865     930 ..     835     941 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.36
                 THHHHHHHHHHHHHHCCT-SSTT CS
     Drf_FH3   1 eghekvleatldfkevaeergrf 23 
                 egh+kv++a++  k    e grf
  KHJ34957.1 477 EGHLKVIQALDYIKTQTGENGRF 499
                 69********************9 PP

  == domain 2  score: 174.0 bits;  conditional E-value: 4.5e-55
                 HHHHHHHHHHHHHHCCT-SSTTHHHHHHHHH........HSS-HHHHHHHHHHHHHHHHSS.SSHHHHHHHHHHHHCTTHHHHHHHHCTSCSHHHHHHH CS
     Drf_FH3   2 ghekvleatldfkevaeergrfrslvgaldel.......enelveykvatmllInalvnsp.edlqfRlhLRseflalGLdkiidklreleneeLddql 92 
                 ++++v+e t+d+      rg+++slvga+del       en l+ey+vat+ lIn++v++p +dlq+R+h+R++f+a+G+++i++k++ +++e +d+q+
  KHJ34957.1 501 AWMRVVEVTIDG------RGKMGSLVGASDELrnggigmENLLMEYAVATLFLINMIVDAPrKDLQLRVHIRAQFMACGIKRILTKMEAFQYEVIDKQV 593
                 8***********......*******************************************77************************************ PP

                 HHHHHHHHHHHHHHHHHHT........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
     Drf_FH3  93 qafeeerneDeeellerae........dktvdlddpeelfellknkvkdteaepyllsilqhllli.rddeeekesylklleelvsqivlqrtkidpkk 182
                 ++f++++  D+e+lle++          +  dl+dp+++++ +++kv+++++++y++s lqhllli  ++eee+ ++++l+++++++++++r+ +d+  
  KHJ34957.1 594 ERFRTNEVIDYEDLLEHESssnkdsteVEVKDLNDPNQIVDAIMQKVRGSRTQDYFISSLQHLLLIrDTQEEEQLRMFQLVDSMLTYVAMDRRLPDM-- 690
                 ***************88888888888678889**********************************888999999******************9877.. PP

                 XXXXXXXXXXXXX CS
     Drf_FH3 183 derkslevaieeL 195
                 d ++sl++++++L
  KHJ34957.1 691 DLKQSLNFTVRSL 703
                 99999*9999876 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.17
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXX.XXXXXXXXXXXXXXX CS
     Drf_FH3 119 dpeelfellknkvkdteaepyllsilqhllli..rddeeekesylkllee.lvsqivlqrtkidpk 181
                 dp++ +  l++++++t+a++ ++   q  +    ++ ++ + ++ k++++   + i+lq++k+ p+
  KHJ34957.1 865 DPSDRLRALREEMQTTGAQDSVTRKAQSTTRDadSKLTRGQSQIQKTVDSeSSQTIKLQENKDAPE 930
                 788889999***************999999987733344444555666651555577776665553 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1760 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1454  (0.0810977); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.04u 0.31s 00:00:01.35 Elapsed: 00:00:00.48
# Mc/sec: 10914.71
//
Query:       KHJ34958.1  [L=217]
Description: hypothetical protein EV44_g0503 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.083   13.2   1.8       0.19   12.1   0.5    2.0  2  Gag_p12   Gag polyprotein, inner coat protein p12


Domain annotation for each model (and alignments):
>> Gag_p12  Gag polyprotein, inner coat protein p12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.5     1e-05      0.19       9      55 ..     130     176 ..     121     186 .. 0.84
   2 ?   -0.5   0.0     0.092   1.6e+03      29      48 ..     189     206 ..     183     215 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 1e-05
     Gag_p12   9 akppkpqvlsdsGGplidlltedpppyrdarpsssdrenneeeaata 55 
                   p  p+ l d     +d   e pppy ++  ++  re n+  a++ 
  KHJ34958.1 130 NDPQEPRNLQDNLYEGLDAHGEAPPPYAQTSKPPGFREVNGIIASPV 176
                 56778999999999999************999********9888775 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.092
     Gag_p12  29 tedpppyrdarpsssdrenn 48 
                 +e+pp y +    s  +++n
  KHJ34958.1 189 SEEPPTYNEHV-IS-VQNQN 206
                 69999994433.33.33333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       531  (0.0296168); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1671.39
//
Query:       KHJ34959.1  [L=535]
Description: putative escrt-i component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-37  127.6   0.0    3.6e-37  126.9   0.0    1.4  1  UEV         UEV domain
    2.7e-19   68.9   0.0      5e-19   68.0   0.0    1.5  1  Vps23_core  Vps23 core domain


Domain annotation for each model (and alignments):
>> UEV  UEV domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.9   0.0     4e-41   3.6e-37       1     121 []      27     149 ..      27     149 .. 0.95

  Alignments for each domain:
  == domain 1  score: 126.9 bits;  conditional E-value: 4e-41
                 HHHHHHHHHHH-TTEEEEEEEEE-TTS-EEEEEEEEEEEE-SSSTTS-EEEEEEE--TTTTTS--EEEE-GCC--TSGGGGGB-TTSBB--HHHHS--T CS
         UEV   1 vvkdvvkvlqkfknlkprtevytfedgesklllnlkGtipvkykgatyniPiliwvlesyPveaPivyvkptksmvikknenvdaqGlvylpyLeeWkr 99 
                 ++++v ++l+k+++l+prt+++t+++g+s+lll+++Gtipv+++g+ y +Pi iw+++ yPveaP+vyv  t+ mvi+++++vd qG++y+pyL  W  
  KHJ34959.1  27 TYNNVAQLLSKYSSLSPRTDIFTYDNGKSALLLKISGTIPVSFRGTQYRFPIAIWIPHLYPVEAPLVYVVATEGMVIRPGQHVDLQGKIYHPYLVGWAD 125
                 6889*********************************************************************************************99 PP

                 ..TT--HHHHHHHHHH-----XXX CS
         UEV 100 ..eksnlvslvqelaqafeeesPl 121
                      nl++ v+ l ++f++e+P+
  KHJ34959.1 126 nsDIFNLIDFVEILRDVFAKEPPV 149
                 4344679999999**********7 PP

>> Vps23_core  Vps23 core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.0   0.0   5.5e-23     5e-19       1      64 []     462     525 ..     462     525 .. 0.98

  Alignments for each domain:
  == domain 1  score: 68.0 bits;  conditional E-value: 5.5e-23
  Vps23_core   1 elvvaetplsnqllelvaedkAieDtiylLdkaldrgkidldtflKqvReLareqFlkralikK 64 
                 el+va+ ++ nql+elv+e++++ D++ +L +++++g+i+  +f+K++R+L+re++lk+al++K
  KHJ34959.1 462 ELLVAPHVVGNQLYELVSEERSLGDALFVLARSVEKGRISPAVFVKMTRSLSREWYLKKALVRK 525
                 689***********************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (535 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       808  (0.0450667); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.41
# Mc/sec: 3915.06
//
Query:       KHJ34960.1  [L=288]
Description: putative methylglutaconyl- hydratase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-43  148.0   0.0    7.5e-37  127.0   0.0    2.8  2  ECH_1     Enoyl-CoA hydratase/isomerase
    2.3e-27   96.4   0.2    4.6e-25   88.8   0.2    2.1  1  ECH_2     Enoyl-CoA hydratase/isomerase
  ------ inclusion threshold ------
      0.078   12.5   0.0       0.12   11.9   0.0    1.2  1  Pox_P21   Poxvirus P21 membrane protein


Domain annotation for each model (and alignments):
>> ECH_1  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   3.3e-07     0.002       5      38 ..      12      45 ..       9      48 .. 0.91
   2 !  127.0   0.0   1.3e-40   7.5e-37      37     249 ..      64     286 ..      53     287 .. 0.86

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 3.3e-07
                TEEEEEE--CGCTTEE-HHHHHHHHHHHHHHHHS CS
       ECH_1  5 gvaviklnrPeavNalsaelltEliqalekledd 38
                 v v+ lnrP + Na+s +ll+El qa++++ ++
  KHJ34960.1 12 KVRVLSLNRPAKRNAISRQLLKELRQAINQIHTE 45
                688999************************9886 PP

  == domain 2  score: 127.0 bits;  conditional E-value: 1.3e-40
                 HSTTECEEEEEE.BTSEEEEEB-HHHHHHHHCHHHHHHHCCHHHHHHHHHHSSSEEEEEE-SEEETHHHHHHHHSSEEEEETTTEEE-GGGGGTS--CT CS
       ECH_1  37 ddksvravvLtG.gdkaFaaGadlkemaeeekakqallkeevlelwtklytvpkpviaavnGaaigGGlelalacDiviaadnasfglnelklGlipga 134
                 +++s r+ +Lt+  +  F+aGadl+e+     ++ a++  e+   ++ l+++p+p i+a++  a+gGGlelal+  ++++  +a  g +e++lG+ipga
  KHJ34960.1  64 NQPSTRVLILTSsVETCFCAGADLTERESFTAEETASFLAELRGTFSSLSSLPIPSISAISSVALGGGLELALCSHLRVVTTTAILGFPETRLGIIPGA 162
                 5679*************************999******************************************************************* PP

                 TCHHHHHHHHHHHHHHHHHHHT-EEEHHHHHHCTSSSE...EESG.GGHHHHHHHHH.HHHHHSCHHHHHHHHH....HHHHHHHHHHHHHHHHHHHHH CS
       ECH_1 135 ggtqilarkvGkskAeeilllgkkisaqealkvGlvdk...vvpe.eqlleealela.eklaekspaalrqlke....alnakledalaeqleaeaklf 224
                 ggt +l+  +G+s+A+ ++l+g+kis+qea   Gl d+   ++p+ ++     +++a e++ e s++ +  + e    a++ +l+       ++e +++
  KHJ34960.1 163 GGTYRLPALIGHSRARDLILTGRKISGQEAHFLGLADRlveILPReDESNTDLRKRAlEEVQETSINLAFEICEggplAIRSALKAINSGNPDIENQMY 261
                 ***********************************98622266874555555555542555555555555555523334555555556667899***** PP

                 HHHCTSHHHHHHHHHHHTCSH---- CS
       ECH_1 225 estfskddikeGlqaflEkrkpefe 249
                 e+++ +dd++e l a++Ekrkp f 
  KHJ34960.1 262 EKVVCSDDRNEALVAYKEKRKPIFS 286
                 **********************986 PP

>> ECH_2  Enoyl-CoA hydratase/isomerase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.8   0.2   7.8e-29   4.6e-25       1     173 [.      13     203 ..      13     263 .. 0.82

  Alignments for each domain:
  == domain 1  score: 88.8 bits;  conditional E-value: 7.8e-29
                 .EEEEE--GGGTT-B-HHHHHHHHHHHHHH....................CC-TT-SEEEEEESSSSECE--B--HHHHHHHHCS-THHHHHHHHHHHH CS
       ECH_2   1 vgvitLnrpkalNaLslemvralkealkew....................ekddevklvvlkgagekafCAGgDvralyeaakegkkeeeeffreeYkl 79 
                 v+v+ Lnrp++ Na+s +++++l++a++++                     +++++++++l+++ e +fCAG D+ +  +   e++   ++f +e    
  KHJ34960.1  13 VRVLSLNRPAKRNAISRQLLKELRQAINQIhteyddyekkllenkrniknLNQPSTRVLILTSSVETCFCAGADLTERESFTAEET---ASFLAELRGT 108
                 58999**************999999988773333333333332222222123567888999999***********99766555544...359999999* PP

                 HHHHHC-SS-EEEEE-BEEETHHHHHHTTSSEEEE-TT-EEE--GGGGT----TTHHHHHHCSST.THHHHHHHH---B-HHHHHHTTS--EE-- CS
       ECH_2  80 nyliatypkpvvalmdGivmGgGvGlsvhgsfrvvtertvfAmPEtaIGlfPDvGgsyfLsrlpg.elGlylalTGarlkgadalaaglathyvp 173
                  + ++++p p ++ +  +++GgG+ l++ +++rvvt ++++  PEt++G++P  Gg+y L+ l g + ++ l lTG++++g++a ++gla+ +v+
  KHJ34960.1 109 FSSLSSLPIPSISAISSVALGGGLELALCSHLRVVTTTAILGFPETRLGIIPGAGGTYRLPALIGhSRARDLILTGRKISGQEAHFLGLADRLVE 203
                 **************************************************************9664789**********************9986 PP

>> Pox_P21  Poxvirus P21 membrane protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0     2e-05      0.12      13      41 ..      81     109 ..      76     129 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2e-05
     Pox_P21  13 fsaGaGvsdkeLftkeeeesflPkkggda 41 
                 f aGa ++++e ft ee  sfl    g +
  KHJ34960.1  81 FCAGADLTERESFTAEETASFLAELRGTF 109
                 99********************9855544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (288 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1025  (0.0571699); expected 358.6 (0.02)
Passed bias filter:                      804  (0.0448435); expected 358.6 (0.02)
Passed Vit filter:                       100  (0.00557756); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 2230.40
//
Query:       KHJ34961.1  [L=450]
Description: putative zinc knuckle transcription factor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.5e-26   88.7  44.0    1.6e-06   27.9   0.8    6.6  6  zf-CCHC         Zinc knuckle
    2.2e-06   27.4  27.3      0.011   15.5   0.3    6.1  6  zf-CCHC_6       Zinc knuckle
    3.7e-06   26.6  32.0      0.012   15.3   0.4    6.1  6  zf-CCHC_4       Zinc knuckle
    5.3e-05   22.9  39.4     0.0018   18.1   0.8    6.3  6  zf-CCHC_2       Zinc knuckle
     0.0017   18.0  30.4     0.0099   15.6   2.5    6.0  6  zf-C2H2_10      C2H2 zinc-finger
  ------ inclusion threshold ------
        2.4    8.2  35.6       0.73    9.8   1.8    5.9  6  zf-CCHC_3       Zinc knuckle
        2.5    8.0  31.5        9.7    6.2   0.5    5.2  5  PHD             PHD-finger


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.1   3.7   7.7e-07     0.002       2      18 .]      79      95 ..      78      95 .. 0.93
   2 !   11.4   2.3   0.00011      0.28       3      13 ..     101     111 ..     100     116 .. 0.81
   3 !   16.5   1.6   2.6e-06    0.0066       1      18 []     247     264 ..     247     264 .. 0.94
   4 !   27.9   0.8   6.1e-10   1.6e-06       3      17 ..     277     291 ..     275     292 .. 0.94
   5 !   25.0   0.2     5e-09   1.3e-05       2      17 ..     312     327 ..     311     328 .. 0.96
   6 !   15.5   1.2   5.3e-06     0.013       1      18 []     335     352 ..     335     352 .. 0.92

  Alignments for each domain:
  == domain 1  score: 18.1 bits;  conditional E-value: 7.7e-07
                CTSSSSSSSSTTTTSTS CS
     zf-CCHC  2 kCynCGepGHiardCpk 18
                 C+ C e GH+a++Cp+
  KHJ34961.1 79 NCRICDEQGHRANECPN 95
                7***************6 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00011
                 TSSSSSSSSTT CS
     zf-CCHC   3 CynCGepGHia 13 
                 C+nC+e+GH a
  KHJ34961.1 101 CRNCQEEGHEA 111
                 *********55 PP

  == domain 3  score: 16.5 bits;  conditional E-value: 2.6e-06
                 SCTSSSSSSSSTTTTSTS CS
     zf-CCHC   1 rkCynCGepGHiardCpk 18 
                 +kC nC+  GH  r Cp+
  KHJ34961.1 247 PKCSNCNTLGHTRRRCPE 264
                 59***************6 PP

  == domain 4  score: 27.9 bits;  conditional E-value: 6.1e-10
                 TSSSSSSSSTTTTST CS
     zf-CCHC   3 CynCGepGHiardCp 17 
                 C+nC+++GH+ rdCp
  KHJ34961.1 277 CFNCNKTGHRMRDCP 291
                 **************9 PP

  == domain 5  score: 25.0 bits;  conditional E-value: 5e-09
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +C+nC  +GHi+++Cp
  KHJ34961.1 312 TCRNCDAEGHISKECP 327
                 7**************9 PP

  == domain 6  score: 15.5 bits;  conditional E-value: 5.3e-06
                 SCTSSSSSSSSTTTTSTS CS
     zf-CCHC   1 rkCynCGepGHiardCpk 18 
                 +kC nC ++GH +  C++
  KHJ34961.1 335 IKCQNCEQMGHTKVRCTE 352
                 59**************85 PP

>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.6   0.6     0.047   1.2e+02       4      23 ..      80      97 ..      79     100 .. 0.87
   2 ?    0.0   0.3      0.31   7.8e+02       4      14 ..     101     111 ..      99     119 .. 0.85
   3 !   15.5   0.3   4.5e-06     0.011       3      21 ..     248     264 ..     247     270 .. 0.91
   4 ?    3.3   0.3     0.029        74       3      20 ..     276     291 ..     274     299 .. 0.84
   5 !   10.0   0.1   0.00023      0.58       4      21 ..     313     328 ..     311     332 .. 0.87
   6 !   11.9   0.3   5.8e-05      0.15       1      22 [.     334     355 ..     334     360 .. 0.77

  Alignments for each domain:
  == domain 1  score: 2.6 bits;  conditional E-value: 0.047
   zf-CCHC_6  4 CknCGAFGHtarSkrCPmkc 23
                C+ C   GH+a    CP k 
  KHJ34961.1 80 CRICDEQGHRA--NECPNKP 97
                9999999**99..99**995 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.31
   zf-CCHC_6   4 CknCGAFGHta 14 
                 C+nC   GH a
  KHJ34961.1 101 CRNCQEEGHEA 111
                 ****9999976 PP

  == domain 3  score: 15.5 bits;  conditional E-value: 4.5e-06
   zf-CCHC_6   3 KCknCGAFGHtarSkrCPm 21 
                 KC nC  +GHt+  +rCP 
  KHJ34961.1 248 KCSNCNTLGHTR--RRCPE 264
                 9***********..9***5 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.029
   zf-CCHC_6   3 KCknCGAFGHtarSkrCP 20 
                  C nC   GH++  + CP
  KHJ34961.1 276 LCFNCNKTGHRM--RDCP 291
                 599********9..7898 PP

  == domain 5  score: 10.0 bits;  conditional E-value: 0.00023
   zf-CCHC_6   4 CknCGAFGHtarSkrCPm 21 
                 C+nC A GH    k CP+
  KHJ34961.1 313 CRNCDAEGHIS--KECPL 328
                 *********85..9***7 PP

  == domain 6  score: 11.9 bits;  conditional E-value: 5.8e-05
   zf-CCHC_6   1 rvKCknCGAFGHtarSkrC..Pmk 22 
                 r+KC+nC   GHt    rC  P+k
  KHJ34961.1 334 RIKCQNCEQMGHTK--VRCtePLK 355
                 89**********98..44433665 PP

>> zf-CCHC_4  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.7     0.014        35      34      48 ..      80      94 ..      76      95 .. 0.92
   2 ?    0.7   0.9      0.17   4.3e+02      32      47 ..      99     114 ..      98     115 .. 0.84
   3 !   15.3   0.4   4.8e-06     0.012      33      48 ..     248     263 ..     246     264 .. 0.94
   4 !   13.5   0.3   1.7e-05     0.043      28      48 ..     271     291 ..     269     292 .. 0.91
   5 ?    4.4   0.2     0.012        31      34      48 ..     313     327 ..     310     328 .. 0.92
   6 !    8.4   0.7   0.00069       1.8      31      48 ..     334     351 ..     333     352 .. 0.90

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.014
   zf-CCHC_4 34 CyiCgvlGHsdkrCd 48
                C iC   GH +++C+
  KHJ34961.1 80 CRICDEQGHRANECP 94
                **************8 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.17
   zf-CCHC_4  32 sfCyiCgvlGHsdkrC 47 
                 ++C +C   GH++  C
  KHJ34961.1  99 TICRNCQEEGHEAFGC 114
                 68*********97666 PP

  == domain 3  score: 15.3 bits;  conditional E-value: 4.8e-06
   zf-CCHC_4  33 fCyiCgvlGHsdkrCd 48 
                 +C++C+ lGH+++rC+
  KHJ34961.1 248 KCSNCNTLGHTRRRCP 263
                 6**************8 PP

  == domain 4  score: 13.5 bits;  conditional E-value: 1.7e-05
   zf-CCHC_4  28 ErLrsfCyiCgvlGHsdkrCd 48 
                 Er   +C++C+  GH +++C+
  KHJ34961.1 271 ERTTVLCFNCNKTGHRMRDCP 291
                 777789**************8 PP

  == domain 5  score: 4.4 bits;  conditional E-value: 0.012
   zf-CCHC_4  34 CyiCgvlGHsdkrCd 48 
                 C +C   GH  k+C+
  KHJ34961.1 313 CRNCDAEGHISKECP 327
                 **************8 PP

  == domain 6  score: 8.4 bits;  conditional E-value: 0.00069
   zf-CCHC_4  31 rsfCyiCgvlGHsdkrCd 48 
                 r++C +C  +GH+  rC 
  KHJ34961.1 334 RIKCQNCEQMGHTKVRCT 351
                 578**********99995 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   1.7   0.00013      0.32       6      21 .]      80      95 ..      79      95 .. 0.94
   2 !    5.7   0.9    0.0051        13       5      14 ..     100     109 ..     100     109 .. 0.97
   3 !    6.6   1.1    0.0028       7.1       5      21 .]     248     264 ..     248     264 .. 0.94
   4 !   18.1   0.8   6.9e-07    0.0018       5      20 ..     276     291 ..     276     292 .. 0.95
   5 !    6.8   0.3    0.0024       6.1       6      20 ..     313     327 ..     312     328 .. 0.91
   6 ?   -0.5   1.3      0.45   1.1e+03       5      14 ..     336     345 ..     336     345 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00013
   zf-CCHC_2  6 ChiCgkkGHyIqdCPt 21
                C+iC   GH  ++CP+
  KHJ34961.1 80 CRICDEQGHRANECPN 95
                ***************6 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0051
   zf-CCHC_2   5 vChiCgkkGH 14 
                 +C+ C+  GH
  KHJ34961.1 100 ICRNCQEEGH 109
                 8********* PP

  == domain 3  score: 6.6 bits;  conditional E-value: 0.0028
   zf-CCHC_2   5 vChiCgkkGHyIqdCPt 21 
                 +C  C++ GH  + CP+
  KHJ34961.1 248 KCSNCNTLGHTRRRCPE 264
                 7***************6 PP

  == domain 4  score: 18.1 bits;  conditional E-value: 6.9e-07
   zf-CCHC_2   5 vChiCgkkGHyIqdCP 20 
                 +C  C+k GH  +dCP
  KHJ34961.1 276 LCFNCNKTGHRMRDCP 291
                 5*************** PP

  == domain 5  score: 6.8 bits;  conditional E-value: 0.0024
   zf-CCHC_2   6 ChiCgkkGHyIqdCP 20 
                 C+ C + GH  ++CP
  KHJ34961.1 313 CRNCDAEGHISKECP 327
                 *********999998 PP

  == domain 6  score: -0.5 bits;  conditional E-value: 0.45
   zf-CCHC_2   5 vChiCgkkGH 14 
                 +C  C + GH
  KHJ34961.1 336 KCQNCEQMGH 345
                 699******9 PP

>> zf-C2H2_10  C2H2 zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.2   1.0     0.058   1.5e+02       8      17 ..      82      90 ..      79      96 .. 0.72
   2 ?    0.2   0.4      0.26   6.6e+02       6      14 ..     101     109 ..      99     110 .. 0.81
   3 !   15.6   2.5   3.9e-06    0.0099       5      20 ..     248     263 ..     248     265 .. 0.93
   4 ?    4.6   0.1     0.011        27       6      14 ..     277     285 ..     272     288 .. 0.82
   5 ?   -1.7   0.0      0.97   2.5e+03       4      14 ..     311     321 ..     309     322 .. 0.80
   6 !   12.2   0.5   4.5e-05      0.11       2      20 ..     333     351 ..     333     354 .. 0.92

  Alignments for each domain:
  == domain 1  score: 2.2 bits;  conditional E-value: 0.058
  zf-C2H2_10  8 YChetGHtRA 17
                 C e+GH  A
  KHJ34961.1 82 ICDEQGHR-A 90
                5******4.4 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.26
  zf-C2H2_10   6 CSYChetGH 14 
                 C  C+e GH
  KHJ34961.1 101 CRNCQEEGH 109
                 556****** PP

  == domain 3  score: 15.6 bits;  conditional E-value: 3.9e-06
  zf-C2H2_10   5 tCSYChetGHtRAkCe 20 
                 +CS C+  GHtR +C 
  KHJ34961.1 248 KCSNCNTLGHTRRRCP 263
                 7**************6 PP

  == domain 4  score: 4.6 bits;  conditional E-value: 0.011
  zf-C2H2_10   6 CSYChetGH 14 
                 C  C++tGH
  KHJ34961.1 277 CFNCNKTGH 285
                 555****** PP

  == domain 5  score: -1.7 bits;  conditional E-value: 0.97
  zf-C2H2_10   4 itCSYChetGH 14 
                  tC  C   GH
  KHJ34961.1 311 LTCRNCDAEGH 321
                 68888999999 PP

  == domain 6  score: 12.2 bits;  conditional E-value: 4.5e-05
  zf-C2H2_10   2 nkitCSYChetGHtRAkCe 20 
                 ++i+C  C + GHt  +C 
  KHJ34961.1 333 SRIKCQNCEQMGHTKVRCT 351
                 79************99996 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.2    0.0073        19       6      22 ..      79      95 ..      76     100 .. 0.83
   2 ?    9.8   1.8   0.00029      0.73       3      24 ..      97     116 ..      95     124 .. 0.84
   3 ?   -0.4   0.2      0.46   1.2e+03       7      35 ..     249     273 ..     247     276 .. 0.67
   4 ?    2.1   0.5     0.074   1.9e+02       4      21 ..     274     291 ..     271     303 .. 0.79
   5 ?    7.3   0.1    0.0018       4.5       6      21 ..     312     327 ..     308     333 .. 0.86
   6 ?    6.1   3.1    0.0042        11       4      21 ..     334     351 ..     331     360 .. 0.79

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0073
   zf-CCHC_3  6 aCQkClkkGHwtYECkn 22
                 C  C ++GH + EC+n
  KHJ34961.1 79 NCRICDEQGHRANECPN 95
                6999************5 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00029
   zf-CCHC_3   3 asaaCQkClkkGHwtYECknag 24 
                   + C +C ++GH ++ C+   
  KHJ34961.1  97 PATICRNCQEEGHEAFGCT--R 116
                 6799**************9..4 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.46
   zf-CCHC_3   7 CQkClkkGHwtYECknagerkytkRpsrt 35 
                 C +C + GH    C++      +  p+rt
  KHJ34961.1 249 CSNCNTLGHTRRRCPE----QIVENPERT 273
                 8999999998777773....235556665 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.074
   zf-CCHC_3   4 saaCQkClkkGHwtYECk 21 
                 +++C +C k+GH    C+
  KHJ34961.1 274 TVLCFNCNKTGHRMRDCP 291
                 689*********766665 PP

  == domain 5  score: 7.3 bits;  conditional E-value: 0.0018
   zf-CCHC_3   6 aCQkClkkGHwtYECk 21 
                 +C +C  +GH + EC+
  KHJ34961.1 312 TCRNCDAEGHISKECP 327
                 7**************8 PP

  == domain 6  score: 6.1 bits;  conditional E-value: 0.0042
   zf-CCHC_3   4 saaCQkClkkGHwtYECk 21 
                 ++ CQ+C + GH    C+
  KHJ34961.1 334 RIKCQNCEQMGHTKVRCT 351
                 688*********876666 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   5.2    0.0094        24       2      38 ..      80     123 ..      79     134 .. 0.79
   2 ?    0.5   0.4      0.22   5.7e+02      17      27 ..     248     258 ..     240     262 .. 0.86
   3 ?    4.4   9.0     0.014        36       8      51 ..     267     318 ..     248     319 .. 0.83
   4 ?    6.2   0.5    0.0038       9.7       8      27 ..     303     322 ..     298     336 .. 0.84
   5 ?    5.1   1.6     0.008        20      16      35 ..     335     356 ..     324     365 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0094
                 BTTTTS.....TTSTTSCEEEETTTSCEEETT..TSSSTHSHHS CS
         PHD   2 CavCkk.....ksdeeeelvqCdgCkrwfHqk..Clkpplesee 38 
                 C++C++     ++  ++    C +C++  H +  C +p + +++
  KHJ34961.1  80 CRICDEqghraNECPNKPATICRNCQEEGHEAfgCTRPRKINRD 123
                 *****99987666669999***********85558888776555 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.22
                 EETTTSCEEET CS
         PHD  17 qCdgCkrwfHq 27 
                  C +C++  H+
  KHJ34961.1 248 KCSNCNTLGHT 258
                 5999*999997 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.014
                 TTSTTSCEEEETTTSCEEET..TTSSSTHSHHSHHSS......TBSSTTTHT CS
         PHD   8 ksdeeeelvqCdgCkrwfHq..kClkppleseekpeg......ewlCekCke 51 
                  ++ e+++v+C +C+++ H   +C +p +++  ++++        +C++C+ 
  KHJ34961.1 267 VENPERTTVLCFNCNKTGHRmrDCPDPRVDRLAEHKNedsgenALTCRNCDA 318
                 4567899************6448*****99877777778999999*****86 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.0038
                 TTSTTSCEEEETTTSCEEET CS
         PHD   8 ksdeeeelvqCdgCkrwfHq 27 
                 ++d +e+ + C +C+   H 
  KHJ34961.1 303 NEDSGENALTCRNCDAEGHI 322
                 5788999***********97 PP

  == domain 5  score: 5.1 bits;  conditional E-value: 0.008
                 EEETTTSCEEETT..TSSSTHS CS
         PHD  16 vqCdgCkrwfHqk..Clkpple 35 
                 + C++C++  H+k  C +p +e
  KHJ34961.1 335 IKCQNCEQMGHTKvrCTEPLKE 356
                 89*********86447776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       787  (0.0438954); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 2823.64
//
Query:       KHJ34962.1  [L=193]
Description: hypothetical protein EV44_g4973 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (193 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       547  (0.0305092); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1422.91
//
Query:       KHJ34963.1  [L=145]
Description: hypothetical protein EV44_g0236 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-09   35.9   5.4    4.9e-09   35.9   5.4    1.4  2  STE2      Fungal pheromone mating factor STE2 GPCR


Domain annotation for each model (and alignments):
>> STE2  Fungal pheromone mating factor STE2 GPCR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.9   5.4   2.7e-13   4.9e-09     236     279 ..       1      45 [.       1      46 [. 0.96
   2 ?   -2.9   0.1      0.18   3.2e+03       4      32 ..      81     109 ..      80     112 .. 0.74

  Alignments for each domain:
  == domain 1  score: 35.9 bits;  conditional E-value: 2.7e-13
                 XXXXXXHHHHHHHHHTTXX.XXXXXXXXXXXXXXXXXXXXXXXXX CS
        STE2 236 mscqtliiPsifaileyav.ksndelasltltlVvlsLPLsslwA 279
                 m+++t+i Psifai++++   +++++ ++ l++V+l+LPLs+lw 
  KHJ34963.1   1 MGTCTMIFPSIFAIIHFIDvPTFPSIDTWPLAVVALLLPLSTLWT 45 
                 89*****************878**********************6 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.18
                 XXXXXXXXXXX-----S-THHHHHHHHHH CS
        STE2   4 lnqtitltspdgtevevsfaeldefvkes 32 
                 ++q++ +   ++++ + +++e++++++++
  KHJ34963.1  81 FSQNLKFGFGKNKTNKYNIEEINSINYTK 109
                 56777777777777788999999888766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (145 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       672  (0.0374812); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1126.11
//
Query:       KHJ34964.1  [L=368]
Description: hypothetical protein EV44_g3384 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (368 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1067  (0.0595125); expected 358.6 (0.02)
Passed bias filter:                      291  (0.0162307); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.22s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2928.17
//
Query:       KHJ34965.1  [L=433]
Description: hypothetical protein EV44_g2568 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (433 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.18s 00:00:00.64 Elapsed: 00:00:00.33
# Mc/sec: 3948.31
//
Query:       KHJ34966.1  [L=271]
Description: hypothetical protein EV44_g1835 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      335  (0.0186848); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1940.25
//
Query:       KHJ34967.1  [L=465]
Description: putative 26s protease regulatory subunit 4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-41  142.3   0.0    2.4e-41  141.3   0.0    1.5  1  AAA             ATPase family associated with various cellula
    1.3e-11   44.3   0.2    2.5e-11   43.4   0.2    1.5  1  Prot_ATP_ID_OB  Proteasomal ATPase OB C-terminal domain
      5e-11   42.2   0.5    9.2e-11   41.4   0.5    1.4  1  AAA_lid_3       AAA+ lid domain
    1.7e-06   28.3   0.0    3.5e-06   27.2   0.0    1.4  1  AAA_2           AAA domain (Cdc48 subfamily)
      6e-06   26.6   0.6       0.02   15.1   0.1    2.7  2  AAA_22          AAA domain
    1.2e-05   24.6   0.0      2e-05   23.9   0.0    1.3  1  DUF815          Protein of unknown function (DUF815)
    4.6e-05   23.4   0.1    0.00017   21.6   0.1    2.0  1  AAA_5           AAA domain (dynein-related subfamily)
    0.00026   21.4   0.2     0.0079   16.6   0.1    2.2  2  AAA_16          AAA ATPase domain
    0.00028   20.7   0.0    0.00067   19.4   0.0    1.6  1  RuvB_N          Holliday junction DNA helicase RuvB P-loop do
    0.00079   20.0   0.0     0.0015   19.1   0.0    1.5  1  AAA_18          AAA domain
     0.0015   18.2   0.5     0.0071   16.0   0.0    2.3  2  Prot_ATP_OB_N   Proteasomal ATPase OB N-terminal domain
     0.0019   18.5   0.1     0.0084   16.4   0.0    2.1  2  AAA_28          AAA domain
     0.0045   17.2   0.0      0.027   14.6   0.0    2.1  2  AAA_33          AAA domain
  ------ inclusion threshold ------
      0.017   14.9   0.0      0.039   13.7   0.0    1.5  1  IstB_IS21       IstB-like ATP binding protein
      0.018   15.1   0.0      0.035   14.1   0.0    1.4  1  AAA_14          AAA domain
      0.018   14.9   0.0      0.041   13.8   0.0    1.6  1  AAA_3           ATPase family associated with various cellula
      0.018   15.0   0.2       0.63    9.9   0.1    2.5  2  NACHT           NACHT domain
      0.029   13.6   0.5      0.071   12.3   0.1    1.7  2  TIP49           TIP49 P-loop domain
      0.056   13.8   0.0        0.1   13.0   0.0    1.5  1  RNA_helicase    RNA helicase
      0.063   12.6   0.1       0.12   11.7   0.1    1.3  1  Mg_chelatase    Magnesium chelatase, subunit ChlI
      0.074   12.4   0.1        0.5    9.7   0.1    2.0  2  ATPase          KaiC
      0.075   12.3   0.0       0.19   11.0   0.0    1.6  2  Zeta_toxin      Zeta toxin
      0.092   12.3   1.5       0.64    9.6   0.4    2.4  2  AAA_25          AAA domain
      0.096   12.4   0.4        0.3   10.8   0.4    1.9  1  AAA_24          AAA domain
       0.15   11.5   0.3       0.52    9.7   0.1    1.8  2  PhoH            PhoH-like protein
       0.17   11.1   0.0       0.24   10.6   0.0    1.3  1  DUF2075         Uncharacterized conserved protein (DUF2075)


Domain annotation for each model (and alignments):
>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.3   0.0   3.5e-44   2.4e-41       1     131 [.     247     379 ..     247     380 .. 0.95

  Alignments for each domain:
  == domain 1  score: 141.3 bits;  conditional E-value: 3.5e-44
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH...TTCCCHHHHHHHHHHHHHHHHT CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkeakekakpsilfiDEidalaksr...sgseseeeervvnqLlteldgv 96 
                 v+lyG pGtGKTllakava++++++fl+i gsel++ky+g++++ +r+lf+ a e+a psi+fiDEida++++r   +++ ++e +r++ +Ll++ldg+
  KHJ34967.1 247 VILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQLFQVAAENA-PSIVFIDEIDAIGTKRydsTSGGEKEVQRTMLELLNQLDGF 344
                 79******************************************************9.****************98766678888999999******** PP

                 TTSSSTEEEEEEESSGGGSTHHHHS.TTSSEEEETT CS
         AAA  97 kkkeskvivigatnrpdkldpallr.gRfdrkieie 131
                 +++ ++v vi+atn++d+ldpal+r gR+drki +e
  KHJ34967.1 345 DDR-GDVKVIMATNKIDTLDPALIRpGRIDRKILFE 379
                 **7.66***************************987 PP

>> Prot_ATP_ID_OB  Proteasomal ATPase OB C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   0.2   3.6e-14   2.5e-11       1      56 [.     134     188 ..     134     189 .. 0.96

  Alignments for each domain:
  == domain 1  score: 43.4 bits;  conditional E-value: 3.6e-14
                     EEEEEEE-TTSSEEEEE-TTS-EEEEEE-GGGSSST--TTEEEEEETTTTEEEEEE CS
  Prot_ATP_ID_OB   1 VatVsEvlddteraiVktssdeevvvslagavpremLrpgDlVavdkdtgfifEkL 56 
                     V+t+ E++dd ++aiV ++++ e++vs+ + v+++ L pg++V+++ ++  i+ +L
      KHJ34967.1 134 VGTLEEMIDD-DHAIVSSTTGPEYYVSIMSFVDKDLLEPGASVLLHHKSVSIVGVL 188
                     9*********.*************************************99988776 PP

>> AAA_lid_3  AAA+ lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.4   0.5   1.3e-13   9.2e-11       1      44 [.     402     445 ..     402     446 .. 0.97

  Alignments for each domain:
  == domain 1  score: 41.4 bits;  conditional E-value: 1.3e-13
   AAA_lid_3   1 dvdlkeLAerTeGySGADlaalcreAallAlrrgikeitmedfe 44 
                 dvdl+e   + +  SGAD++a+c eA+llAlr+ +  + medf+
  KHJ34967.1 402 DVDLEEFIGQKDDLSGADIKAICSEAGLLALRERRMRVQMEDFR 445
                 89*****************************************8 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.2   0.0   5.1e-09   3.5e-06       7     105 ..     248     340 ..     243     360 .. 0.83

  Alignments for each domain:
  == domain 1  score: 27.2 bits;  conditional E-value: 5.1e-09
                 EEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-HHHHTTS..EEEEETGGG-------------HHHHHHHHHHH CS
       AAA_2   7 lllgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyvgaeegG..ivllDEidKihpkessgadvSregVqrdLLqil 103
                 +l g  g+Gkt+laka+a+  ++    ++ r+  sel++    + l +     ++  + a+e+   iv++DEid i  k+  +    +++Vqr +L +l
  KHJ34967.1 248 ILYGAPGTGKTLLAKAVANQTSA----TFLRIVGSELIQ----KYLGDGPRLVRQLFQVAAENApsIVFIDEIDAIGTKRYDSTSGGEKEVQRTMLELL 338
                 5668889*************996....************....88888766666655555555558************98888888999********99 PP

                 H- CS
       AAA_2 104 eg 105
                  +
  KHJ34967.1 339 NQ 340
                 75 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1     3e-05      0.02       8      29 ..     247     268 ..     242     275 .. 0.87
   2 !    9.3   0.0    0.0019       1.3      61     128 ..     273     355 ..     267     360 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 3e-05
      AAA_22   8 lvvtGesGtGKTtllrrlleql 29 
                 ++++G +GtGKT+l++ +++q 
  KHJ34967.1 247 VILYGAPGTGKTLLAKAVANQT 268
                 689****************997 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.0019
      AAA_22  61 lralglelka.erlsseellealeqalraravielliiDEaqhlr.....s.........eealeeLrsllnl.srkgvqliLv 128
                 lr++g+el   + ++  +l+++l q + + a  +++ iDE++ +      s          ++le L +l  + +r +v++i++
  KHJ34967.1 273 LRIVGSELIQkYLGDGPRLVRQLFQVAAENAP-SIVFIDEIDAIGtkrydStsggekevqRTMLELLNQLDGFdDRGDVKVIMA 355
                 45555555555555777788666666666666.7**********8876651667888888777777766666567999999975 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   2.9e-08     2e-05      51     116 ..     242     312 ..     197     318 .. 0.86

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 2.9e-08
      DUF815  51 lpannvLLwGarGtGKSslvkallneyaeegLrli..evekedlkelpklvellr...erperfilfvDDL 116
                 +p + v+L+Ga GtGK  l ka+ n+++++ Lr++  e+ ++ l + p+lv++l    +++   i+f+D +
  KHJ34967.1 242 KPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVgsELIQKYLGDGPRLVRQLFqvaAENAPSIVFIDEI 312
                 567789*****************************888999**********98752226677899999975 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.1   2.4e-07   0.00017       1     135 [.     246     367 ..     246     368 .. 0.72

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 2.4e-07
                 EEEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--.........--------.G-SEEEEESGGG--HHHHHHHHHHHHSSEEE..- CS
       AAA_5   1 dvlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreikngttslvdsplvraar.egeilvlDEveraesevlnsLlslleerrlllee 98 
                 +v+L G+pGtgK+ la+ +a  + ++++ + +++      l++++   +++ +lv + +  aa+  ++i+++DE++ + ++  +s      e ++ + e
  KHJ34967.1 246 GVILYGAPGTGKTLLAKAVANQTSATFLRIVGSE------LIQKYL--GDGPRLVRQLFQVAAEnAPSIVFIDEIDAIGTKRYDSTSGGEKEVQRTMLE 336
                 59**************************999986......999999..5666667777766777589*********99888777776655444444333 PP

                 S.SSEEE---........-EEEEEESS--.-TT-TTHHHH CS
       AAA_5  99 g.gelvkaknddller..frviatanpldrslnelspalr 135
                 + ++l +++      r  + vi+++n+ d     l+pal+
  KHJ34967.1 337 LlNQLDGFDD-----RgdVKVIMATNKID----TLDPALI 367
                 3033333333.....23477777777777....6666665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.1   1.1e-05    0.0079      24      51 ..     244     271 ..     233     283 .. 0.80
   2 ?    2.0   0.0      0.34   2.4e+02     121     146 ..     290     319 ..     277     343 .. 0.73

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.1e-05
      AAA_16  24 pelvllsGesGvGKsslvrellralekd 51 
                 p  v+l+G++G+GK+ l+++++++ +++
  KHJ34967.1 244 PKGVILYGAPGTGKTLLAKAVANQTSAT 271
                 589******************9866554 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.34
      AAA_16 121 ellkrllallsrderplvlvlDdlq.....w 146
                 +l+++l++ +++   p ++++D+++     +
  KHJ34967.1 290 RLVRQLFQVAAE-NAPSIVFIDEIDaigtkR 319
                 677888888887.667********9444443 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   9.7e-07   0.00067      35      96 ..     246     315 ..     238     321 .. 0.74

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 9.7e-07
      RuvB_N  35 hvllyGpPGlGkttlakiiakelgvk.lkitsgPvleka.gd...laalltnleek...dvlfideihrl 96 
                  v+lyG+PG Gkt lak +a++  ++ l+i  +  ++k  gd   l+  l ++ ++    ++fidei  +
  KHJ34967.1 246 GVILYGAPGTGKTLLAKAVANQTSATfLRIVGSELIQKYlGDgprLVRQLFQVAAEnapSIVFIDEIDAI 315
                 599******************99887257777788887535533355555555444222699****9765 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.0   2.2e-06    0.0015       1      77 [.     247     353 ..     247     400 .. 0.81

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 2.2e-06
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.....................gvnlrdvakenglllevdpe..........aldeskrldedkldklldaleens 68 
                 ++l G+pG+GKt lak++++ +                       +++l +va+en +++ + +e           ++  +++++  + +ll++l++ +
  KHJ34967.1 247 VILYGAPGTGKTLLAKAVANQTSAtflrivgseliqkylgdgprlVRQLFQVAAENAPSIVFIDEidaigtkrydSTSGGEKEVQRTMLELLNQLDGFD 345
                 79****************99973347888999999999*************************999999999888888888888888888888888887 PP

      AAA_18  69 saleegknl 77 
                 + +++ k++
  KHJ34967.1 346 D-RGDVKVI 353
                 6.4444443 PP

>> Prot_ATP_OB_N  Proteasomal ATPase OB N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0     1e-05    0.0071       2      56 ..     134     189 ..     133     193 .. 0.85
   2 ?   -1.3   0.2       2.5   1.7e+03      21      28 ..     434     441 ..     430     442 .. 0.82

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1e-05
  Prot_ATP_OB_N   2 yGtflavnsqdgtadVlvggrrmrVavsPlvdaeeLrpGqeVlLnEalv.vVealg 56 
                    +Gt+ ++ ++d+ +  ++ g ++ V++   vd + L+pG+ VlL  ++v +V++l+
     KHJ34967.1 134 VGTLEEMIDDDHAIVSSTTGPEYYVSIMSFVDKDLLEPGASVLLHHKSVsIVGVLT 189
                    689999997788888899**************************876544888876 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 2.5
  Prot_ATP_OB_N  21 grrmrVav 28 
                     rrmrV++
     KHJ34967.1 434 ERRMRVQM 441
                    7*****86 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.0   1.2e-05    0.0084       2      36 ..     247     286 ..     246     313 .. 0.76
   2 ?   -1.3   0.1       3.2   2.2e+03      48      72 ..     425     449 ..     412     453 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 1.2e-05
      AAA_28   2 ivitGgestGKTtlleaLaar....gypvv.pEaareile 36 
                 +++ G+++tGKT l++a a++      ++v  E   ++l 
  KHJ34967.1 247 VILYGAPGTGKTLLAKAVANQtsatFLRIVgSELIQKYLG 286
                 789****************874443455555666665554 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 3.2
      AAA_28  48 wvedllafaervleeqleeeaaaaa 72 
                 +++ lla++er+++ q+e+ +aa++
  KHJ34967.1 425 SEAGLLALRERRMRVQMEDFRAARE 449
                 445789999999999**99999865 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       1.8   1.3e+03      58     100 ..      65     106 ..      37     109 .. 0.71
   2 !   14.6   0.0   3.9e-05     0.027       2      28 ..     247     275 ..     247     309 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.8
      AAA_33  58 ilnelarkalsagrnvildatnlsrrerarflklarrlgvpvr 100
                 +  +++ ++++   +++l   +++++er r+ k a++ ++p++
  KHJ34967.1  65 CKLRYL-RMQRIHDHLLLEEEYVDNQERLRKAKSAKEGSAPIS 106
                 444666.478888889999999999999999999999999875 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 3.9e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avll 28 
                 v+l G+pG+GK+ la+ +++++   + ++
  KHJ34967.1 247 VILYGAPGTGKTLLAKAVANQTSatFLRI 275
                 7899***************9999544444 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   5.6e-05     0.039      46      71 ..     243     268 ..     226     279 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 5.6e-05
   IstB_IS21  46 kkenivllGpsGvGKshlaialgvea 71 
                   ++++l G +G+GK+ la a++ ++
  KHJ34967.1 243 PPKGVILYGAPGTGKTLLAKAVANQT 268
                 56789****************99886 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0     5e-05     0.035       5      76 ..     247     315 ..     244     357 .. 0.70

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 5e-05
      AAA_14   5 lvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev 76 
                 +++ Ga  +GKT l+k ++++       +l i   +  +k l d  +l + +++ + e+  +++f+DEi  +
  KHJ34967.1 247 VILYGAPGTGKTLLAKAVANQTS---ATFLRIVGSELIQKYLGDGPRLVRQLFQVAAENAPSIVFIDEIDAI 315
                 899***************98877...777777666655555555335666666654446899*******987 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   5.9e-05     0.041       2      30 ..     247     275 ..     246     286 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 5.9e-05
       AAA_3   2 vllegvPGlaktllvkalakaldlefkri 30 
                 v+l g+PG++ktll+ka+a++ +++f ri
  KHJ34967.1 247 VILYGAPGTGKTLLAKAVANQTSATFLRI 275
                 7899**********************998 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00092      0.63       3      23 ..     247     267 ..     245     274 .. 0.89
   2 ?    2.6   0.0      0.17   1.2e+02      56     114 ..     279     339 ..     267     343 .. 0.79

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00092
                 EEEEC-TTTCHHHHHHHHHHH CS
       NACHT   3 vilqGeaGsGKTtLlqklala 23 
                 vil G++G GKT L++ +a +
  KHJ34967.1 247 VILYGAPGTGKTLLAKAVANQ 267
                 89**************99875 PP

  == domain 2  score: 2.6 bits;  conditional E-value: 0.17
                 HHHCCCCTS--SSS-CCHHHHCCSCCCEEEEEE-STT-SS-TCH............HHHHHC CS
       NACHT  56 dllfsqlpepaapvsevwavllelperlLlilDglDelvtdlgq...kekqpvrtlLselir 114
                 +l+ + l +  + v++ ++v +e++ ++++i D +D + t+       ++++v++ + el++
  KHJ34967.1 279 ELIQKYLGDGPRLVRQLFQVAAENAPSIVFI-DEIDAIGTKRYDstsGGEKEVQRTMLELLN 339
                 5666777777888999*************96.999999887666777667777777777776 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1    0.0001     0.071      51      89 ..     245     281 ..     234     287 .. 0.89
   2 ?   -3.7   0.0       7.4   5.1e+03     138     186 ..     383     430 ..     377     453 .. 0.59

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.0001
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  51 ravLlaGpsgtGktalaiaiskelgedvpfvalsgsevy 89 
                 ++v+l G +gtGkt la a++++ +    f  ++gse+ 
  KHJ34967.1 245 KGVILYGAPGTGKTLLAKAVANQTS--ATFLRIVGSELI 281
                 89*******************9977..789******985 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 7.4
                 TTS--EEEEEE-SS-EEEEEE-HHHHHHH.HHHT--TT-EEEEETTT--E CS
       TIP49 138 kkikevkitlktakeekklklgskiaeel.lkekvkegDviviekesGkv 186
                 + +k  + tl+t+k++ + +++    e + +k+ ++  D+  i +e+G +
  KHJ34967.1 383 QVTKRKIFTLHTSKMSLNEDVDL--EEFIgQKDDLSGADIKAICSEAGLL 430
                 45666677888888776655543..2333256667777777777776655 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   0.00015       0.1       1      26 [.     247     272 ..     247     320 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.00015
  RNA_helicase   1 iwlyGpsgeGKStlakeLakallkkl 26 
                   ++lyG++g+GK++lak +a++ + ++
    KHJ34967.1 247 VILYGAPGTGKTLLAKAVANQTSATF 272
                   689**************888776555 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   0.00018      0.12      25      43 ..     247     265 ..     241     271 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00018
  Mg_chelatase  25 lllvGppGsGKtmlakrlp 43 
                   ++l+G+pG+GKt+lak+++
    KHJ34967.1 247 VILYGAPGTGKTLLAKAVA 265
                   79*************9875 PP

>> ATPase  KaiC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1   0.00073       0.5      14      38 ..     239     263 ..     212     276 .. 0.83
   2 ?    0.3   0.0      0.52   3.6e+02     104     134 ..     288     319 ..     268     345 .. 0.68

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00073
      ATPase  14 gGipegrvvlitGepGtGKtifalq 38 
                  Gi   + v ++G pGtGKt++a+ 
  KHJ34967.1 239 MGIKPPKGVILYGAPGTGKTLLAKA 263
                 5888888899************975 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.52
      ATPase 104 leelieelaeaikeikakrvviDsitgl.aye 134
                    l+++l ++ +e   + v iD i+++ +++
  KHJ34967.1 288 GPRLVRQLFQVAAENAPSIVFIDEIDAIgTKR 319
                 56788899999999999999999999985432 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00027      0.19      15      49 ..     243     275 ..     236     284 .. 0.84
   2 ?   -3.2   0.0       6.2   4.3e+03      82     100 ..     290     308 ..     287     308 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00027
  Zeta_toxin  15 rPklillgGqpGAGKselaellkdelerqgnvvrl 49 
                  Pk ++l G+pG GK+ la+++++++     ++r+
  KHJ34967.1 243 PPKGVILYGAPGTGKTLLAKAVANQT--SATFLRI 275
                 6999******************9997..5666665 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 6.2
  Zeta_toxin  82 elvekllqeaiengyniiv 100
                 +lv++l+q a+en  +i++
  KHJ34967.1 290 RLVRQLFQVAAENAPSIVF 308
                 78999******99988886 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.4   0.00093      0.64      36      54 ..     247     265 ..     239     271 .. 0.86
   2 ?    0.5   0.0      0.54   3.7e+02     129     185 ..     291     354 ..     280     356 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00093
      AAA_25  36 allaGapgtGKttlaldla 54 
                 ++l+GapgtGKt la  +a
  KHJ34967.1 247 VILYGAPGTGKTLLAKAVA 265
                 69************96665 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.54
      AAA_25 129 dvdaleaaieevegvrlvviDplsralgg..densnsd......vgalvealeriarrtgaavll 185
                  v++l +++ e + +  v iD ++++     d++s  +      + +l+++l+ + +r ++ v++
  KHJ34967.1 291 LVRQLFQVAAE-NAPSIVFIDEIDAIGTKryDSTSGGEkevqrtMLELLNQLDGFDDRGDVKVIM 354
                 57888888888.67999999999886555456666655555444566777777777777777665 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.4   0.00043       0.3       5      23 ..     247     267 ..     244     364 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00043
      AAA_24   5 iliyGpsgiGKTtlakel..g 23 
                 +++yG +g+GKT lak    +
  KHJ34967.1 247 VILYGAPGTGKTLLAKAVanQ 267
                 789************988443 PP

>> PhoH  PhoH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.1   0.00075      0.52      22      42 ..     247     267 ..     237     276 .. 0.84
   2 ?   -1.6   0.0       2.2   1.5e+03      74     118 ..     328     372 ..     322     394 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00075
                 EEEE--TTSSTTHHHHHHHHH CS
        PhoH  22 vfaiGpaGtGKtylavalave 42 
                 v+  G  GtGKt+la a+a +
  KHJ34967.1 247 VILYGAPGTGKTLLAKAVANQ 267
                 7899***********999865 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.2
                 ----TTTHHHHHHHTTTS-TTCHHHHHHTTSEEEEEGGGGTT--B CS
        PhoH  74 ekvdpylrplydaLkdllgaekvekllekgkievaplaymRGrTl 118
                 + v+  +  l ++L+ + ++  v+ ++ ++ki +++ a +R   +
  KHJ34967.1 328 KEVQRTMLELLNQLDGFDDRGDVKVIMATNKIDTLDPALIRPGRI 372
                 456667777888888888999999999999999999999995444 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00034      0.24       4      25 ..     247     268 ..     244     319 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00034
     DUF2075   4 vlVtGvaGtGKtvvllnllael 25 
                 v+  G++GtGKt+++ +++++ 
  KHJ34967.1 247 VILYGAPGTGKTLLAKAVANQT 268
                 6789***********9999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (465 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       500  (0.0278878); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              26  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 3434.17
//
Query:       KHJ34968.1  [L=247]
Description: putative ubiquitin conjugating enzyme [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.4e-44  148.6   0.0    1.2e-43  148.2   0.0    1.2  1  UQ_con     Ubiquitin-conjugating enzyme
    3.8e-06   26.6   0.9    6.9e-06   25.8   0.1    1.8  2  UBA_3      Fungal ubiquitin-associated domain
     0.0038   16.9   0.0      0.007   16.1   0.0    1.4  1  Prok-E2_B  Prokaryotic E2 family B
  ------ inclusion threshold ------
        0.1   12.4   0.1       0.24   11.3   0.1    1.5  1  DUF1421    UBA-like domain (DUF1421)
       0.15   12.3   0.0       0.25   11.6   0.0    1.5  1  RWD        RWD domain


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.2   0.0   3.3e-47   1.2e-43       1     138 [.       8     145 ..       8     147 .. 0.97

  Alignments for each domain:
  == domain 1  score: 148.2 bits;  conditional E-value: 3.3e-47
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBE.TTSBB-CGGGSTTT--TTSHHH CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvd.ksGevcldiLkeekWspaltle 98 
                 r++kel +++++++s+i+a++vd  + +++++ ++gp+dtpYegg++ +++++p++YP++pP+++f+tki+HPn++ ++G++cld L +  Wsp+lt++
  KHJ34968.1   8 RIAKELIDIQEDAESNIHAQPVDGADYTHLEASFTGPPDTPYEGGTYIVDIKIPNEYPFRPPHMRFITKIWHPNISsQTGAICLDTLGSA-WSPVLTIK 105
                 789********************99***************************************************************55.******** PP

                 HHHHHHHHHHHS--TTS-SSHHHHHHHHHTHHHHHHHHHH CS
      UQ_con  99 svllsiqsLlaepnpesplnkeaakllkkdreeykkkvke 138
                 s+lls+qsLl++p+p++p ++e+ak+l +++e++ + +++
  KHJ34968.1 106 SALLSLQSLLSTPEPKDPQDAEVAKMLMNHPEQFVRVARD 145
                 **********************************998876 PP

>> UBA_3  Fungal ubiquitin-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       1.9   6.9e+03      20      26 ..     171     177 ..     170     178 .. 0.85
   2 !   25.8   0.1   1.9e-09   6.9e-06       7      37 ..     193     223 ..     190     233 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.9
                 T--HHHH CS
       UBA_3  20 GFekdkv 26 
                 GF+++++
  KHJ34968.1 171 GFDQQNI 177
                 9999998 PP

  == domain 2  score: 25.8 bits;  conditional E-value: 1.9e-09
                 --SHHHHHHHHHHT--HHHHHHHHHHS--SS CS
       UBA_3   7 GidrdlVdefvsqGFekdkvievLkrLgiks 37 
                 G +++lVd fv++GF+ d+vie++   ++  
  KHJ34968.1 193 GYNKNLVDRFVNMGFDIDRVIEAFLYVNVDR 223
                 7889*******************98777755 PP

>> Prok-E2_B  Prokaryotic E2 family B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   1.9e-06     0.007      33     118 ..      47     129 ..      12     136 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.9e-06
   Prok-E2_B  33 t..sggtvdlrlvypdsfpllppavflqdpeqlkllpHintfggaLClleeeldldewdpngsvadvleqlqqvLn.egisgdedaefa 118
                 t  +ggt+ + + +p+++p+ pp+++        + p i++++ga+Cl    +   +w p  +++ +l +lq +L    +++ +dae+a
  KHJ34968.1  47 TpyEGGTYIVDIKIPNEYPFRPPHMRFITKI---WHPNISSQTGAICL---DTLGSAWSPVLTIKSALLSLQSLLStPEPKDPQDAEVA 129
                 144899********************98877...**************...78888999999999999999999998889999998887 PP

>> DUF1421  UBA-like domain (DUF1421)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   6.7e-05      0.24       3      18 ..     197     212 ..     195     217 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.7e-05
     DUF1421   3 dlidkvasMGfrrDqV 18 
                 +l+d +++MGf  D+V
  KHJ34968.1 197 NLVDRFVNMGFDIDRV 212
                 89*************8 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   7.1e-05      0.25      54      83 ..      53      85 ..       8     118 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 7.1e-05
                EEEEEEEE-SSTTSS--EEEEEECC...SS-HH CS
                xxxxxxxxxxxxxxxxxxxxxxxxx...xxxxx RF
         RWD 54 slkleiklpeeYPeeaPiislsste...nlpke 83
                ++ ++ik p+eYP ++P +++ ++    n++ +
  KHJ34968.1 53 TYIVDIKIPNEYPFRPPHMRFITKIwhpNISSQ 85
                67899************9998877645544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 1993.49
//
Query:       KHJ34969.1  [L=698]
Description: putative catalase cat1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     3e-165  550.0   0.1   3.7e-165  549.7   0.1    1.1  1  Catalase      Catalase
    7.9e-45  152.2   0.1    1.3e-44  151.5   0.1    1.4  1  Catalase_C    C-terminal domain found in long catalases
    4.2e-15   55.7   0.0      8e-15   54.8   0.0    1.5  1  Catalase-rel  Catalase-related immune-responsive


Domain annotation for each model (and alignments):
>> Catalase  Catalase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  549.7   0.1  6.2e-169  3.7e-165       1     381 [.      37     420 ..      37     422 .. 0.97

  Alignments for each domain:
  == domain 1  score: 549.7 bits;  conditional E-value: 6.2e-169
                 B-TTS-B-S-SSS-EEESTTS-BBTT-HHHHHHHHHHHT------SS--SEEEEEEEEEESS--TTT---GGGSSTT-EEEEEEEEE-SS--TT--SSS CS
    Catalase   1 ttseGapvsdnqnsltagerGplllqdvhlieklahfdreripeRvvhAkGagahgeFevtkdisdltkakllskvgkktpvlvRfStvagekgsadta 99 
                 tt++G p++ +++sl+agerGp+ll+d++l++k++hfd+er+peR vhA+Gagahg+F  ++d+s++t+a++l+++gk+tpv+vRfStvag++gsadt+
  KHJ34969.1  37 TTDAGGPIQ-DNASLKAGERGPTLLEDFILRQKIQHFDHERVPERAVHARGAGAHGVFISYQDWSNITAASFLNTAGKETPVFVRFSTVAGSRGSADTV 134
                 789999996.56799************************************************************************************ PP

                 SS--EEEEEEEETTEEEEEEEESSSS-S-S-GGGHHHHHHHHSB-TTT-SB..-HHH..HHHHHHT-GGGHHHHHHHHSGGGSBS-GGGS-EE--S-EE CS
    Catalase 100 RdvrGfavkfyTeeGnwDlvgnntpvFfirDpikfpdlihsqkrepqtnlk..daam..fwdflslnpeslhqvlilfsdrgipksyrhmngygvhtfk 194
                 Rdv+Gfa++fyT+eGn+D+vgnn+pvFfi+D+i fpdlih++k+epq++++  ++a+  +wdf+s++p +lh+++++++ +gip+syrhm+g+gv+t +
  KHJ34969.1 135 RDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAILFPDLIHAVKPEPQSEIPqaSSAHdtAWDFFSQQPSTLHTLFWAMAGNGIPRSYRHMDGFGVNTMR 233
                 ***************************************************77334466**************************************** PP

                 EE-TT--EEEEEEEEEETT---B--HHHHHHHHHH-TTHHHHHHHHHHHTT---EEEEEEEEEEHHHHTTTHHHHT-TT----TTTS--EEEEEEEEEE CS
    Catalase 195 lvnkegevvyvkfhfktkqgvknltaeeaeklagedpdyatrdLyeaiekgeypewelyvqvmteeeaeklrfnilDlTkvwpekevplrevGkltLnr 293
                 lv+++g+++ vk+h+kt qg ++l++eea+ lag++ d++++dL++aie+g+ pewel vq+++e++ + + f++lD+Tk +pe+ vp++ +Gk++Ln 
  KHJ34969.1 234 LVTNDGTSKLVKWHWKTMQGKASLVHEEAQVLAGKNSDFHRQDLWDAIEDGNGPEWELGVQIVDENDVQAYGFDLLDATKFLPEELVPITLLGKMKLNA 332
                 *************************************************************************************************** PP

                 --S-HHHHTTT----TT---TTEE--S-HHHHHHHHHHHHHHHHHT.-TTGGGSGGG---..---S----TT-.....S-S---SS-S- CS
    Catalase 294 npenyFaevEqvafspsnlvpGiepseDklLqgRlfsYadtqryRl.GvnyqqlpvNrpkakvanyqrdGamrveankgkepnYepnsl 381
                 np+nyFae+Eq++f+p+++v+G+++s+D+lLqgR++sY dtq +R  G+n++q+p+Nrp +kv+n++rdGa+++ +++++ ++Y pn++
  KHJ34969.1 333 NPTNYFAETEQIMFQPGHVVRGVDFSDDPLLQGRIYSYLDTQLNRHgGPNFEQIPINRPLTKVHNNNRDGAAQMLIHTNR-ASYSPNTI 420
                 **********************************************99***********99***999******9988887.9****986 PP

>> Catalase_C  C-terminal domain found in long catalases
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.5   0.1   2.2e-48   1.3e-44       2     152 .]     549     695 ..     548     695 .. 0.98

  Alignments for each domain:
  == domain 1  score: 151.5 bits;  conditional E-value: 2.2e-48
  Catalase_C   2 glkVgiLasndseaslaqakalaaalaaegvdvtvvaeklgsaegvnrTYstadaveFDaivvadgaeslfsakataasslfpagrplqllldayrhgK 100
                 g +VgiL+s +s++s+ qa++la+++++ g+++++++e+l  ++g+nrTY+++da++ Da+vv+d++e+lf++   +as+l+p grp+q+l+dayr+gK
  KHJ34969.1 549 GFTVGILTSVASSSSIIQASQLANSFTSYGLKTLIIGESL--QSGINRTYASMDASLLDAVVVTDCVEKLFNS-GIKASTLYPLGRPSQILVDAYRWGK 644
                 89**************************************..*****************************75.7************************ PP

  Catalase_C 101 pigalGsgaealkaagisaeepGVyvadsasealvekvkegLatfrfldRfp 152
                 pig ++s++++++++    +++GVy+ ++++e lv++v +gL+t+rf+dRf+
  KHJ34969.1 645 PIGSVSSDRKIFESVVPGVTGDGVYIVKTTDE-LVSEVVNGLKTYRFVDRFA 695
                 ***************************99998.******************7 PP

>> Catalase-rel  Catalase-related immune-responsive
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.8   0.0   1.3e-18     8e-15       3      63 ..     455     515 ..     453     517 .. 0.97

  Alignments for each domain:
  == domain 1  score: 54.8 bits;  conditional E-value: 1.3e-18
                   GG--SSHHHHHHHHHS-HHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHH-HHHHHHHHH CS
  Catalase-rel   3 dfddhfsQagllyrsmseeekerlvnniafelskvedeeiqerqlehfakvDpdlgqrVae 63 
                   +f+d +sQ++l+y+s+ ++e++ l+n+i+ e+s+++++ i++++l ++++v++d ++rVa+
    KHJ34969.1 455 SFADVWSQPRLFYNSLIPAEQQFLINAIRLEVSQIKSDIIKQNVLVQLNRVSNDVATRVAA 515
                   799********************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (698 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       314  (0.0175135); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 5006.79
//
Query:       KHJ34970.1  [L=415]
Description: putative sodium calcium transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-21   77.2  23.5    1.2e-11   44.7   7.4    2.1  2  Na_Ca_ex  Sodium/calcium exchanger protein


Domain annotation for each model (and alignments):
>> Na_Ca_ex  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   7.4   6.9e-16   1.2e-11       6     147 ..      20     153 ..      17     157 .. 0.90
   2 !   38.5   8.2     6e-14   1.1e-09       7     146 ..     272     406 ..     266     411 .. 0.86

  Alignments for each domain:
  == domain 1  score: 44.7 bits;  conditional E-value: 6.9e-16
                 HHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCECCHHHH CS
    Na_Ca_ex   6 filslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigslkvdseslkldlg 104
                 f+ +++l   +a+ ++ +a+ +a   gi++ v++l + +++  l El +++++++++++ l++g ++Gs i n+l+  +l++l+    +    lk+d g
  KHJ34970.1  20 FVSAVALFQYGANTFTHHAAILAGRAGIPEVVVSL-IPTTSAELEELSIILASLIQKKPALGLGHIIGSTISNVLGAFSLVLLF---HKG--RLKFDRG 112
                 8889999999*************99*****99988.************************************************...333..4689999 PP

                 HHHHHHHHHHHHHHHTCHHHHHHTEEHHHHHHHHHHHHHHHHH CS
    Na_Ca_ex 105 llllvallllllvlllllplfvpgrltvleglvllllYalylv 147
                 +++++++ +++++l+ l  l  ++++ + eg+ ll+++ +y++
  KHJ34970.1 113 AKVFATVSFVMTTLFNL--LTWQNKMGIEEGISLLVAFSVYIF 153
                 99999999988887766..3347***************99997 PP

  == domain 2  score: 38.5 bits;  conditional E-value: 6e-14
                 HHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCECCHHHHH CS
    Na_Ca_ex   7 ilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigslkvdseslkldlgl 105
                 +++ l+++++  + + s+++ia+ l++s  ++Glt+l++++ lpE ++ ++  ++  + + +++  G ni+ ++l++G+i++    k+ +++++ d+  
  KHJ34970.1 272 LIGSLALILSGLVATYSVAAIATALDLSNFIAGLTILSFAVPLPERLIKFSYNRRLPPGVLMASTAGTNIILITLCMGIILVALD-KNGKNNFDGDMIS 369
                 5566777788888889***************************************99*************************966.8888888888877 PP

                 HHHHHHHHHHHHHHTCHHHHHHTEEHHHHHHHHHHHHHHHH CS
    Na_Ca_ex 106 lllvallllllvlllllplfvpgrltvleglvllllYalyl 146
                 + l a++ ++++ll++  +         eg+ ll+lY++yl
  KHJ34970.1 370 FELWACWGCSFLLLII--TW--FGGRPYEGAFLLVLYCVYL 406
                 7888888877555544..33..567789************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       758  (0.0422779); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3128.86
//
Query:       KHJ34971.1  [L=331]
Description: hypothetical protein EV44_g3366 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (331 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       747  (0.0416643); expected 358.6 (0.02)
Passed bias filter:                      583  (0.0325172); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2621.93
//
Query:       KHJ34972.1  [L=173]
Description: putative peptidyl-trna hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      8e-34  117.1   0.0    9.4e-34  116.8   0.0    1.0  1  Pept_tRNA_hydro  Peptidyl-tRNA hydrolase


Domain annotation for each model (and alignments):
>> Pept_tRNA_hydro  Peptidyl-tRNA hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.8   0.0   5.3e-38   9.4e-34       1     158 [.       7     169 ..       7     172 .. 0.86

  Alignments for each domain:
  == domain 1  score: 116.8 bits;  conditional E-value: 5.3e-38
                      EEEE---SSTCCTTCGGGHHHHHHHHHHHH.........TCEEEEEETTEEEEEEEESS-GGGHHHHHHHHHHHCT--..GEEEEEEETTSSTT CS
  Pept_tRNA_hydro   1 livGLGNpgkeYektRHNvGflvvdelakk.........aevaegkiegekvlllkPqtymNlsGeavkellkfykieseeilvvhDdldlplg 85 
                      l++++GNp + Ye+t H++G+ v+ +la+          ++ +++   g++++l k+ + mN sG av++++kfy    ++++v+hD+l+lplg
       KHJ34972.1   7 LVCSIGNP-APYENTLHSAGHIVLSALARVlsykfekarGQSGSQVSVGQDYILWKSGSLMNVSGTAVAQAWKFYGG--KQLVVLHDELELPLG 97 
                      799*****.78****************9886665555555555558899999************************6..79************* PP

                      EEEEEESS-.-TT-HHHHHHHHHHT-S-SEEEEEEE---ST-CGG.HHHHCTSB-HHHHHC.HHHHHHHHHHCHHH CS
  Pept_tRNA_hydro  86 kirlkkkgs.sgghnGlksiikklgtekfvRlriGIgrpekakkk.vadyVLskfskeeek.leevlekaaealee 158
                      ++r+k + s ++ghnGlksi+     ++++R+ iGIgrp +++++ va yVL k++  e++ le++++k+ e l++
       KHJ34972.1  98 NFRVKSGKSsAKGHNGLKSIL----IKDYTRIGIGIGRPISRDSDlVAAYVLRKIKGYERAtLEACASKVLEELQK 169
                      *****8776266********4....568***********9978888**********88866588887776666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       254  (0.014167); expected 358.6 (0.02)
Passed bias filter:                      237  (0.0132188); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 1245.68
//
Query:       KHJ34973.1  [L=219]
Description: putative 60s ribosomal protein l10 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-44  151.5   0.1    1.5e-44  151.2   0.1    1.1  1  Ribosomal_L16  Ribosomal protein L16p/L10e


Domain annotation for each model (and alignments):
>> Ribosomal_L16  Ribosomal protein L16p/L10e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.2   0.1   8.4e-49   1.5e-44       1     132 []      12     166 ..      12     166 .. 0.97

  Alignments for each domain:
  == domain 1  score: 151.2 bits;  conditional E-value: 8.4e-49
                    HXSSXXBSSSXXSSTSXX.XSXXXXXESX...........EEEEESSXEEEEHHHHHHHHHHHCTCCCCTSXC...EEXXSXXXXEEEEE-..... CS
  Ribosomal_L16   1 pkrkkyrKsrkryirgvs.tkgtklefgd...........ygLvalekgqltaealeaariainrylkkkrgk...klwirvfphhpvtkk..... 76 
                    +k+k+y+Ksr  ++rgv+ +k++++++g+           ++Lv++e++ql++ealeaari++n+yl+k  gk   +l++r++p h+v+++     
     KHJ34973.1  12 CKNKPYPKSR--FNRGVPdPKIRIFDLGRkranvdefplcIHLVSNEYEQLSSEALEAARICANKYLVKIAGKegfHLRVRAHPYHVVRINkmlsc 105
                    89********..*********************************************************999999********************* PP

                    SS-TTTSSSS....XEEEEEEEEEXSSCEEEEE.TTXXXSHHHHHHHHHHHHTSSSXEEEE CS
  Ribosomal_L16  77 agedRmgkGk....Gkpegwvarvkigqiifei.kagvneeiakealrraasKlpiktkiv 132
                    ag+dR+++G+    Gkp+g+varv+igqii+++   + ++++a ealrr ++K+p+++ki+
     KHJ34973.1 106 AGADRLQTGMrgawGKPNGTVARVNIGQIILSVrTRDNHRATALEALRRSQYKFPGRQKII 166
                    *********************************74445*********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (219 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       301  (0.0167884); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1723.21
//
Query:       KHJ34974.1  [L=109]
Description: putative 60s ribosomal protein l30 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-25   87.6   0.0    3.9e-25   87.4   0.0    1.0  1  Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 famil


Domain annotation for each model (and alignments):
>> Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.4   0.0   2.2e-29   3.9e-25       2      94 ..      12     104 ..      11     105 .. 0.98

  Alignments for each domain:
  == domain 1  score: 87.4 bits;  conditional E-value: 2.2e-29
                     HHHHHHHHHHHHTEEEESHHHHHHHHHTTTESEEEEETTSSSGGHHHHHHHHHH..HTTEEEEEESCHHHHHHHTTSSSECSEEEEEESTTTHHH CS
  Ribosomal_L7Ae   2 aieevlkkakkagklvlGlkevtkalergeaklvilAedvepeekkkllealck..ekevpyvkvkskkeLGelvgkkrpvsalaikdegdskdl 94 
                     +i++ l +++k+gk++lG+k ++k+l++g+aklvi+A +++p +k++ le++++  +++v+++ +++  eLG+++gk +++s++ai d+gds++l
      KHJ34974.1  12 NINNRLALVMKSGKVTLGYKSTLKTLRSGKAKLVIIAGNTPPLRKSE-LEYYSMlsKTNVHHFAGNN-IELGTACGKLFRCSTMAILDAGDSDIL 104
                     79999******************************************.*******************.************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       282  (0.0157287); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.39
# Mc/sec: 829.81
//
Query:       KHJ34975.1  [L=587]
Description: hypothetical protein EV44_g2167 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        0.1   12.3   0.1        0.6    9.8   0.0    2.1  2  Alfin     Alfin


Domain annotation for each model (and alignments):
>> Alfin  Alfin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0     0.079   1.4e+03       3      30 ..     213     240 ..     211     256 .. 0.86
   2 ?    9.8   0.0   3.3e-05       0.6      45      73 ..     507     536 ..     504     541 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.079
       Alfin   3 eeifkdfkarraglvkalttdveefyeq 30 
                 +ei ++ +++++g +ka  + +ee+ ++
  KHJ34975.1 213 DEIQRESRQKKHGTIKARNNTAEELAQE 240
                 67889999999*****999999998876 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 3.3e-05
       Alfin  45 dgtWevklpaeevppelPep.alGinlard 73 
                 + tW v++p+++vp   P p  lG+n+   
  KHJ34975.1 507 NRTWTVSVPHSSVPGGTPSPrPLGVNFNTH 536
                 679*****************67*****765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (587 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       784  (0.043728); expected 358.6 (0.02)
Passed bias filter:                      409  (0.0228122); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 4074.29
//
Query:       KHJ34976.1  [L=272]
Description: hypothetical protein EV44_g3630 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1990.39
//
Query:       KHJ34977.1  [L=283]
Description: hypothetical protein EV44_g0678 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.3e-23   79.9   1.0    9.3e-23   79.9   1.0    2.1  3  DUF5315     Disordered region of unknown function (DUF5315)


Domain annotation for each model (and alignments):
>> DUF5315  Disordered region of unknown function (DUF5315)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.9   1.0   5.2e-27   9.3e-23       9      73 ..     101     164 ..      93     167 .. 0.90
   2 ?   -3.4   0.0      0.49   8.8e+03      53      72 ..     192     212 ..     191     214 .. 0.59
   3 ?   -3.1   0.0      0.39     7e+03      10      21 ..     258     269 ..     251     271 .. 0.70

  Alignments for each domain:
  == domain 1  score: 79.9 bits;  conditional E-value: 5.2e-27
     DUF5315   9 svdrqDalWaeid.tLddVklsAeegkkthvFgeehekaLeelReaqikLaqawrrseadekleee 73 
                  ++  Da+W e++ tL++V++sA++g   hvFg +h+kaLe+lR+aqi+La+aw+rse++e++e  
  KHJ34977.1 101 VDNPDDAQWLEMQrTLKEVEMSATKG--IHVFGTQHSKALEDLRNAQIELANAWARSESEEAIEDG 164
                 455689********************..*********************************99965 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.49
     DUF5315  53 aqikLaqawrrsea.deklee 72 
                 a+++L +a+  se+  e+++e
  KHJ34977.1 192 ANVRLGNALDPSESeSERTKE 212
                 667788888888553444443 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 0.39
     DUF5315  10 vdrqDalWaeid 21 
                 + ++ ++W+ id
  KHJ34977.1 258 ARESKNIWENID 269
                 455677899988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       792  (0.0441742); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2029.65
//
Query:       KHJ34978.1  [L=676]
Description: putative camp-mediated signaling protein sok1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     5e-103  345.5   1.4     6e-102  342.0   1.4    2.0  1  Tcp11     T-complex protein 11


Domain annotation for each model (and alignments):
>> Tcp11  T-complex protein 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  342.0   1.4  3.3e-106    6e-102       1     439 [.     120     663 ..     120     666 .. 0.90

  Alignments for each domain:
  == domain 1  score: 342.0 bits;  conditional E-value: 3.3e-106
       Tcp11   1 LrheilfDpelqfrpnldgeegrvketmakayWdaleeele...........kdppdysrllallkelrdiLlslvpnslrqeieevLDldlleqqlek 88 
                 Lrh+i+fDp+l+frpnldg++g++k +  +++W+ ++++l+           ++++  ++l+a lk +r iL++lvp ++ + i+e +++ ll+qq++k
  KHJ34978.1 120 LRHDINFDPDLHFRPNLDGDKGKRKAQKGNEFWETMRRKLQqflinrdqfdrEHGNVEWCLPATLKAIRAILETLVPPQDCAIIDESFNVNLLMQQFRK 218
                 8*************************************************99889999***************************************** PP

       Tcp11  89 gvldleklaewlanllkklCAPmRDeevdkmvekiseaseessvdklVegLrelfeiLelMklDvaNhqirllrplLietaveyErkkFqerlesgkis 187
                 gv d++kla wl++llk++CAPmRD++vd+m++++s++ ++ +v+ lV+g+++l+ +Le+MklD+aNhqir+lrp+Li+++ve+E+k F+++++ g+ +
  KHJ34978.1 219 GVADIPKLALWLSQLLKSHCAPMRDSWVDEMAQQLSDGDRNYDVGLLVTGIKSLLAVLEAMKLDIANHQIRCLRPALIDNTVEFEQKFFARKIKVGRLD 317
                 *************************************************************************************************** PP

       Tcp11 188 lestrkWlrkarekleaesserdpesssssssassspspskvliqglldllsssadpsseeefPetLalDhaRLrelradlrqlvvlasclllfkqlvk 286
                  + +  W++++  +       ++ +s+ + ++   s+     + ++l++l++  +d    e +P t+++D++RL++lr+d+ +l+ l++c+  ++ l +
  KHJ34978.1 318 ASLAHDWYKRSC-S------IHSHPSIDNLRH---SRGNPWNFLRALVNLILPTND---VEVIPHTFLFDEERLMKLRSDMLDLINLEVCMFHYHCLKA 403
                 *********994.2......233333332122...2222345779********753...345*********************************9977 PP

       Tcp11 287 rdvsss............................................................................................. 292
                 +++++                                                                                              
  KHJ34978.1 404 SSRTTCesqiftddtpntsfvssplfqpsspekstilssptlplpddfsssylrqnyktrkierdhndfrmfmskadhtfvasndsspasspsstpslp 502
                 76655589******************************************************************************************* PP

       Tcp11 293 ............vsrsslkklkeeilalledees.esg.erwt...esialeiarevskslkessalpdempeaakawLskqlqkvlsksdpvfklles 374
                             +  +s+ +l++ +la+l +++s  ++ ++w    +++al++ r+++        +p ++++  +++Ls +l+++   ++ vf+l+e+
  KHJ34978.1 503 dacsptrflfpqTATDSTTALRSSLLAILASSPSpINPiQKWHklaPDLALQVLRSTN--------TPFTQLQNFETQLSWNLSET---RSRVFRLVEN 590
                 *********99988999999***********997634479999998999*******44........34478999***********9...999******* PP

       Tcp11 375 rvrkalearlla..............ssasekvretstasekllpaGlsefveeveelaerlaklvsvhwrvfgp.lYee 439
                 +v ++l+  l +              +       +++t+++++ +   +   e++ e+a+r+a+l+++hw+v+g+ +Y++
  KHJ34978.1 591 CVVSKLLPELHRlvesyipkttfqifE-------AATTPKVRHRAFTQTGPNEDILEMATRIAHLGVLHWQVWGEwFYQQ 663
                 *********999888888654333331.......4444444444444444567**********************77776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (676 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       554  (0.0308997); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.42
# Mc/sec: 4879.10
//
Query:       KHJ34979.1  [L=933]
Description: putative actin interacting protein 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   4.4e-148  493.7  16.5   4.4e-148  493.7  16.5    2.4  3  AIP3          Actin interacting protein 3
  ------ inclusion threshold ------
      0.091   12.9   0.2       0.44   10.7   0.2    2.2  1  Spore_III_AB  Stage III sporulation protein AB (spore_III_AB)
        3.9    7.6   7.3        5.4    7.1   0.8    3.8  3  COG2          COG (conserved oligomeric Golgi) complex compon


Domain annotation for each model (and alignments):
>> AIP3  Actin interacting protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.7      0.04   2.4e+02      77     186 ..      62     192 ..      21     205 .. 0.63
   2 ?   -2.9   0.3      0.45   2.7e+03     143     157 ..     334     348 ..     275     395 .. 0.58
   3 !  493.7  16.5  7.4e-152  4.4e-148       1     408 []     447     888 ..     447     888 .. 0.96

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.04
                 XXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXXXXXXXX...........................................XXXXXX CS
        AIP3  77 vkkhideslaslskelkelkssiesqkaslqevserqeeaakekasesla..................................kkelkaqlkevqslr 141
                 ++k +++ l   ++ l+ l++  ++q+as+++vs+                                                  +++ +q ++v+sl+
  KHJ34979.1  62 IEKSVTHLLVATKQLLETLTQ-WSRQQASDAQVSDV-------------YvrlgyefnlacrafasinvdtsdlgnvpellrtiLESTLSQEASVESLE 146
                 333333333333333333332.22222222222222.............02233334444555777778888888888888887777778888999999 PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXX.XXXXXXHH CS
        AIP3 142 rdLavlrqlysefkseikeslselrek.akkvkeaslastkkssnr 186
                 r L  +r +  +  + +k + ++lr+k +++v+  + +s + s++ 
  KHJ34979.1 147 RYLPRIRDIIINLLHGLKRKQQKLRQKqMRDVNGDHSTSRNISASS 192
                 9999999999999999999999998762557774444455555555 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.45
                 XXXXXXXXXXXXXXX CS
        AIP3 143 dLavlrqlysefkse 157
                 d + +rq +s  + +
  KHJ34979.1 334 DQRNIRQNSSRYHAK 348
                 122222222211111 PP

  == domain 3  score: 493.7 bits;  conditional E-value: 7.4e-152
                 XXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        AIP3   1 FLqlgskvkKvvleeg...ltiasLrllFvekFaysp..ggedfPeiyiqDpksgvrYeLedlsdvkdrsvLsLniepldevkkhideslaslskelke 94 
                 FLq+++kvkK+ l+ g   l+ia+L+l+F+ekFa+++  +g d+PeiyiqDp+sg+r+eLedl+d++drsvL+Ln+e+ldevk+hid++l+s++k +++
  KHJ34979.1 447 FLQYKTKVKKFLLPGGyndLSIARLQLAFIEKFAWNThhNGVDLPEIYIQDPVSGIRHELEDLNDIRDRSVLVLNVEALDEVKRHIDDGLGSIKKIIEN 545
                 9*************87778******************9999********************************************************** PP

                 XXXXX...XXXXXXXXXXXXXXXXXXXXXXXX...............................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        AIP3  95 lkssiesqkaslqevserqeeaakekasesla......................kkelkaqlkevqslrrdLavlrqlysefkseikeslselrekakk 171
                 +k+++++q+ ++q+vs+rq+++ake ++ +++                      k+++  q +evq++rrdLavlrq ys+ +s++++s++++r+ a++
  KHJ34979.1 546 VKTAVDDQQITIQRVSDRQQDTAKELSRIQTNvslspqesknsipksitipgknKEDTLVQQQEVQAIRRDLAVLRQEYSSYQSDVQNSINAVRKAAEN 644
                 *************************99977779********************999999**************************************** PP

                 XX....XXXX.XXXXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        AIP3 172 vk....easlastkkssnrayiekgkkkLseesdklvtkvddLqDlvedlrkDVvqRgvrpskkqlesvakeikkakkelkkleeyiktekpvWkkiWe 266
                 vk    +a l++++++s+r+y+++gkk L+eesdklv++vddLqD+vedlrkDVv Rgvrp ++qlesv+++i+ a  +lkk+++ ik+e+p+W+kiWe
  KHJ34979.1 645 VKtaaaKACLPDMTSDSGRKYVNEGKKGLDEESDKLVAHVDDLQDTVEDLRKDVVLRGVRPLPRQLESVSRDIALAGMKLKKMKDLIKRERPIWTKIWE 743
                 **998888899**************************************************************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTXXXXXXX......XXXXX.XXXXXXXXX.-HHHHHHHHHHHHHT----HHHHHHHHH CS
        AIP3 267 kELqkvveeqqfLtlqeeLlaDLkeDlekasevfelveqvveeqekesk......rnkkskarllipepgedlkeakdtvllevralqpdhesRleAie 359
                 kEL++v+++q+ +tl eeL++DL++Dl+kas++f+lve++++eq k+++      r   + +r l   +  d+  ak++vl evral+p+he+RleAie
  KHJ34979.1 744 KELERVCKDQEDMTLIEELIVDLEDDLTKASQTFSLVEEATKEQLKDPQaptnagR---AISRGLNQISIGDPAVAKEGVLDEVRALNPNHEDRLEAIE 839
                 ************************************************97764322...234444455556999************************* PP

                 HHHHHHHTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        AIP3 360 raeklrekelearredefqkELgeFVeekkLkksGGveEverlRkkkde 408
                 raeklr +ele+rre ef+kELg+FVe++kL+ksGG eE++r+Rk kde
  KHJ34979.1 840 RAEKLRARELESRREGEFEKELGNFVENGKLRKSGGYEEADRARKMKDE 888
                 ************************************************7 PP

>> Spore_III_AB  Stage III sporulation protein AB (spore_III_AB)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.2   7.3e-05      0.44      31     142 ..     685     790 ..     674     798 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 7.3e-05
                   HHHHHHHHHHHHHHHH.-SS-HHHHHHHHHHCS-TTHHHHHHHHHHHHH.STSS-HHHHHHHHHHHHGGGS---HHHHHHHHHHHHHHT--SHHHHH CS
  Spore_III_AB  31 eelkralellegeiry.gatpLpealeklaeksesplseffeevaerleekegesfeeaweeavekllkklaLkkedkeilkelgeslgysdregql 126
                    +l+  +e l+ ++   g +pLp  le++++ +    +  ++++ + ++ +e    +++we+++e+     + ++ed+ ++ el   l   d+++  
    KHJ34979.1 685 DDLQDTVEDLRKDVVLrGVRPLPRQLESVSRDIAL-AGMKLKKMKDLIK-RERPIWTKIWEKELERV----CKDQEDMTLIEELIVDLE-DDLTKAS 774
                   56666666677777776778999999999977766.5566788888776.48999999999999995....888**************8.89***** PP

                   HHHHHHHHHHHHHHHH CS
  Spore_III_AB 127 kalelaleeleeeiee 142
                   +++ l++e  +e++++
    KHJ34979.1 775 QTFSLVEEATKEQLKD 790
                   ***********99986 PP

>> COG2  COG (conserved oligomeric Golgi) complex component, COG2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.2     0.052   3.1e+02      67     109 ..     525     567 ..     498     581 .. 0.76
   2 ?    7.1   0.8   0.00091       5.4      68     113 ..     607     652 ..     603     668 .. 0.82
   3 ?   -1.4   0.0       0.4   2.4e+03      66      92 ..     672     698 ..     665     733 .. 0.68

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.052
        COG2  67 lqeeleevesplaaarkkvesvreklsereeeveskleeakel 109
                 l+e  + ++  l +++k +e+v+ ++++++ +++   + +++ 
  KHJ34979.1 525 LDEVKRHIDDGLGSIKKIIENVKTAVDDQQITIQRVSDRQQDT 567
                 5566677888888888999998888888888777655544444 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.00091
        COG2  68 qeeleevesplaaarkkvesvreklsereeeveskleeakeleekr 113
                 q+e++ ++ +la +r++ +s ++ +++ +++v++  e+ k +++k 
  KHJ34979.1 607 QQEVQAIRRDLAVLRQEYSSYQSDVQNSINAVRKAAENVKTAAAKA 652
                 7889999999999999999999999999999999888877766554 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.4
        COG2  66 glqeeleevesplaaarkkvesvrekl 92 
                 gl+ee +++   +  +++ ve++r+ +
  KHJ34979.1 672 GLDEESDKLVAHVDDLQDTVEDLRKDV 698
                 566666666666666666666666544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (933 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1523  (0.0849462); expected 358.6 (0.02)
Passed bias filter:                      487  (0.0271627); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.82u 0.24s 00:00:01.06 Elapsed: 00:00:00.41
# Mc/sec: 6888.43
//
Query:       KHJ34980.1  [L=538]
Description: putative mfs general substrate transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-94  316.7  22.9    3.8e-94  316.1  22.9    1.2  1  Sugar_tr  Sugar (and other) transporter
    8.5e-21   74.3  30.8    8.5e-21   74.3  30.8    2.1  2  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  316.1  22.9   4.2e-98   3.8e-94       2     448 ..      52     531 ..      51     533 .. 0.92

  Alignments for each domain:
  == domain 1  score: 316.1 bits;  conditional E-value: 4.2e-98
                 HHHHHHHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTS CS
    Sugar_tr   2 alvaalggllfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgkn 100
                 al a ++gllfgYdtgvi++++  +     + l++ ++         +li+s++++ a++ s  +gll+d++GRk+++l+a + f+iga++qa+a    
  KHJ34980.1  52 ALSAGISGLLFGYDTGVISSTIVGIRSSLGHPLTTLDK---------SLITSMTSFFALLVSPASGLLADKYGRKSVILVADLAFFIGALIQAFAS--- 138
                 6678899*******************777777777775.........6899*********************************************... PP

                 S-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-.TTHHHHHHHCCHHHHHHHHHHGGGS---HHHH CS
    Sugar_tr 101 svevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsn.adgwrillglqlvpallllilllflPESPryl 198
                 sv v+i+gR +vG+++G+ s ++P+yi E++p+  Rg lv +  l++t+G+++a+++g+ + +++n a+gwr+ +gl +vpa++++i++l +P++Pr+l
  KHJ34980.1 139 SVGVMIIGRSVVGLAIGAGSFVAPLYITELSPAPFRGSLVIVSILFVTLGQVIAYVIGWLFVEVDNaATGWRWIVGLGAVPAIIQSIIMLGMPDTPRWL 237
                 *************************************************************999999******************************** PP

                 HHTT-HHHHHHHHHHHHHC........HHHHHHHHHHHHHHHHHHH.....................HTTHHHHSH...HHHHHHHHHHHHHHTTHHHH CS
    Sugar_tr 199 vekgkeeeakevlaklrge........edadrelaeekdsleaeqeee................kaswkellssktvrqrlligvvlqifqqltGinai 273
                 v++++ +ea++v+ k+ g+        ++  r+++ e+++le++++ +                 ++ +el+    +r++l+i+++lq+fq l+G n++
  KHJ34980.1 238 VMRNRSSEARTVMIKVFGSgtevsylvDLILRDIESEVNELEKAKKGSigsevitswayflawlRHTSSELFCVDANRKALMIACLLQSFQELCGFNSL 336
                 ***************6555558999998999999999999999988889999*888888888777777777777669********************** PP

                 HHHTTTHHHHSS-THHHHHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH..........HHHHTTSS................... CS
    Sugar_tr 274 myysptifenlglsksllvtiivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilg........ivalllvaks................kaa 348
                 my+s tif  lg++ +  +++ v ++nf++t+ +++lvdr+GRR++ll ++ +m+i +++ +         v l +                    + a
  KHJ34980.1 337 MYFSATIFTLLGFESPTFTSLSVACTNFIFTCLSLLLVDRIGRRRILLYSIPFMFIGLLLCSagfsyipdLVSLSG---PeaknisgnnmnslsspDKA 432
                 **************************************************77777766666654446334344444...35559*********999999 PP

                 CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT--CCC CS
    Sugar_tr 349 sivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrtlee 447
                 + v++v i++f+  +a+g+g+vpw+  sElfp+ vR+++++i++ +nw  nfl++l+f  +te  + +++f+++ g+++++ + ++  +pe  g  le+
  KHJ34980.1 433 ALVVLVSIVIFVSSYAVGLGTVPWLQ-SELFPLPVRALGSSISTSTNWATNFLVGLTFLPMTEIFTPTGTFIFYSGVCIIGWLAIWRLYPERNGFGLED 530
                 9***********************99.****************************************************************99998887 PP

                 C CS
    Sugar_tr 448 i 448
                 +
  KHJ34980.1 531 V 531
                 6 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.3  30.8   9.5e-25   8.5e-21       3     291 ..      57     397 ..      55     450 .. 0.79
   2 ?   -4.9   6.7       1.1   9.9e+03     111     174 ..     459     522 ..     433     531 .. 0.71

  Alignments for each domain:
  == domain 1  score: 74.3 bits;  conditional E-value: 9.5e-25
       MFS_1   3 laaflsalarsilgpalplalaedlgispse..igllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqGlga 99 
                 ++++l +++ +++++++   + ++lg   ++   +l++++ +++a++ s+  G l+d++Gr++v+l++ l+f++g+l+ +fass+ +++++r + Gl+ 
  KHJ34980.1  57 ISGLLFGYDTGVISSTIV-GIRSSLGHPLTTldKSLITSMTSFFALLVSPASGLLADKYGRKSVILVADLAFFIGALIQAFASSVGVMIIGRSVVGLAI 154
                 678999999********9.*******55555559*****************************************77777977777************* PP

       MFS_1 100 galfpagaaliadwfpkeergraigllsagfslGailgpllggllasslg....Wravfyilaivsllafvlfllllpeepperkrkspkeee...... 188
                 ga+  ++  +i++++p + rg+ + +  +++ lG ++++++g l+++  +    Wr++  + a+ +++  +   + l  ++++r+ +   + +      
  KHJ34980.1 155 GAGSFVAPLYITELSPAPFRGSLVIVSILFVTLGQVIAYVIGWLFVEVDNaatgWRWIVGLGAVPAIIQSI---IMLGMPDTPRWLVMRNRSSeartvm 250
                 *****************************************9999965447777***************99...5665556666555444444567999 PP

       MFS_1 189 .......................................kgtgpaplvp......awkallkdpvlw......illialllf....ffgfsglltllpl 232
                                                        +       ++      aw    ++  +       +l+ia+ll      +gf++l++++ +
  KHJ34980.1 251 ikvfgsgtevsylvdlilrdiesevnelekakkgsigseV-------ITswayflAWLRHTSSELFCvdanrkALMIACLLQsfqeLCGFNSLMYFSAT 342
                 9999999999999999988888887777666633333332.......3355544434444444444133344434444444445558999999999999 PP

       MFS_1 233 ylqevlglsglllaglllallalvgailallagrlsdrlgrrrrlllallllllaalgl 291
                 +  + lg+     + + l++++  +++ + l+  l+dr+grrr+ll +++++++++l++
  KHJ34980.1 343 I-FTLLGFE--SPTFTSLSVACTNFIFTC-LSLLLVDRIGRRRILLYSIPFMFIGLLLC 397
                 6.9999999..444434666666666663.666666***************99999876 PP

  == domain 2  score: -4.9 bits;  conditional E-value: 1.1
       MFS_1 111 adwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpe 174
                 +++fp + r+++ ++ ++++ +   l  l    +++ +  +++f++  +v++++ + ++ l+pe
  KHJ34980.1 459 SELFPLPVRALGSSISTSTNWATNFLVGLTFLPMTEIFTPTGTFIFYSGVCIIGWLAIWRLYPE 522
                 5677777777777777776666665555555566788889999999999999997765555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (538 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       822  (0.0458475); expected 358.6 (0.02)
Passed bias filter:                      443  (0.0247086); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 3893.45
//
Query:       KHJ34981.1  [L=564]
Description: putative fungal specific transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.8e-08   33.3   9.8    6.4e-08   32.6   9.8    1.4  1  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
    5.2e-08   32.2   0.5    8.9e-08   31.5   0.5    1.4  1  Fungal_trans  Fungal specific transcription factor domain
  ------ inclusion threshold ------
       0.14   11.8   0.0       0.28   10.8   0.0    1.4  1  Saf_2TM       SAVED-fused 2TM effector domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.6   9.8   1.1e-11   6.4e-08       1      37 [.      22      57 ..      22      60 .. 0.93

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 1.1e-11
                SS-HHHHHCT---STSSSS-HHHHHCTHHHCCCCTCC CS
     Zn_clus  1 haCdnCrkkKvKCdakkPaCsnCkklnleCtfysess 37
                +aC +Crk+K+KC++  PaC+ C + + +C  ys+s 
  KHJ34981.1 22 QACMSCRKQKRKCSKTLPACALCHRMGRHCD-YSDSA 57
                69*****************************.98875 PP

>> Fungal_trans  Fungal specific transcription factor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.5   1.5e-11   8.9e-08       1     207 [.     173     366 ..     173     469 .. 0.75

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 1.5e-11
  Fungal_trans   1 ldrffsnfhpqfpilhkpsflpktssenssksayaspllllailalGalfsesetkesnssltsesqefiafplraeilihedfsspssslwilqsL 97 
                   ++ +f  +h+++pil k  ++++     +++  +  p ++l+ l++  l s+  ++++ s+ +         +l+a+ +i+   s+ + s+ +lq+ 
    KHJ34981.1 173 MNNYFLSIHQWIPILSKKRLTRYL----NKPQWEFTPDFALLYLSIKLLISKPKDGIDCSQNEL--------YLAAKRFINLMQSTGFISILVLQAN 257
                   578*********************....555555555555666666677888888888777776........469999998889999999******* PP

  Fungal_trans  98 lllelyektssdralherhhgvavrlarslgLhrnpsyvgkkslwklweeeaesrrRlwwaaFylDktialklGrpp.llddsqinlpLPcddddlw 193
                    l+ lye +    ++ ++ +g  vr    lg +++++     + +   ++ +e+r R wwa+  +D++i++       +  + + +  LP ddd  w
    KHJ34981.1 258 ILITLYEYGHAIYPATWMSSGWSVRYGNLLGINGDKEAIDLLGKPGDEID-QEERLRAWWAVLLIDRIISISSMLYItNSQEPKGEDMLPIDDD-AW 352
                   **************************************999999999999.*******************988775533333344444888887.77 PP

  Fungal_trans 194 esddaseetlvetk 207
                   e  +     ++ ++
    KHJ34981.1 353 ERGEILSAPRMTVS 366
                   76666666666544 PP

>> Saf_2TM  SAVED-fused 2TM effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   4.7e-05      0.28      56     104 ..     424     472 ..     412     472 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 4.7e-05
     Saf_2TM  56 vsfssseipeivlaiilvigvllivvGavllilryvneakrqskkkviv 104
                 +s+ s++ +++++ ++l+ ++l i+ + + +i++ +ne k+q +k+ i+
  KHJ34981.1 424 ESLASKNLFSLISPLALTYSSLCILCSPYSSISDEANEGKNQMRKQAIA 472
                 68889999**************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (564 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       483  (0.0269396); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 4202.17
//
Query:       KHJ34982.1  [L=983]
Description: putative iq calmodulin-binding motif domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.8e-84  283.0   9.6    4.8e-84  283.0   9.6    1.8  2  Tcp11     T-complex protein 11
    0.00087   19.3   0.1     0.0027   17.7   0.1    1.8  1  VirD1     T-DNA border endonuclease VirD1
  ------ inclusion threshold ------
      0.017   15.4   0.1      0.068   13.5   0.1    2.0  1  PET       PET Domain
      0.068   13.1   0.3      0.068   13.1   0.3    2.0  2  APOBEC_N  APOBEC-like N-terminal domain
        2.3    8.6  10.3       0.82   10.1   0.6    3.7  3  DUF3510   Domain of unknown function (DUF3510)


Domain annotation for each model (and alignments):
>> Tcp11  T-complex protein 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.9      0.63   2.3e+03     347     376 ..     174     189 ..      70     253 .. 0.54
   2 !  283.0   9.6   1.3e-87   4.8e-84       2     442 .]     548     962 ..     547     962 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.63
       Tcp11 347 peaakawLskqlqkvlsksdpvfkllesrv 376
                  ea   +              ++k++e+r+
  KHJ34982.1 174 REAEVHK--------------LRKIIEERL 189
                 1111122..............222222222 PP

  == domain 2  score: 283.0 bits;  conditional E-value: 1.3e-87
       Tcp11   2 rheilfDpelqfrpnldgeegrvketmakayWdaleeelekdppdysrllallkelrdiLlslv..pnslrqeieevLDldlleqqlekgvldleklae 98 
                  hei++++e+++ +    +   +++ +++  +d ++++++  +++ +++la + ++r++L++l+  ++s++++i e LD dl+  ql++++++++k+++
  KHJ34982.1 548 THEIAINKEFRISE----DIIPKRRSAMRTAFDLMRNDIK-AGNHDEWVLATAYNVRKKLQRLLteGKSMHASIGEWLDHDLIATQLRHQSFSYDKFFH 641
                 7************7....44578888888899********.78999*******************99******************************** PP

       Tcp11  99 wlanllkklCAPmRDeevdkmv.ekiseaseessvdklVegLrelfeiLelMklDvaNhqirllrplLietaveyErkkFqerlesgkislestrkWlr 196
                  +++ll+klCAP+RD+e++k   e+++        +++V+++++l+  L+ ++lD+aN+ +++  pl++ +a++yE+++F ++l+++++sl+ t++ ++
  KHJ34982.1 642 EISQLLPKLCAPFRDKEIRKVTeEDFR-------DSDVVSRIEALMYALDILQLDYANFLLQQQIPLILANAAKYETHQFMQQLAETNNSLQITENAWK 733
                 ********************9835566.......555************************************************************** PP

       Tcp11 197 karekleaesserdpesss.ssssassspspskvliqglldllsssadpsseeefPetLalDhaRLrelradlrqlvvlasclllfkqlvkrdvsssvs 294
                 +a++k++ + s+r+ e+ + +    ++s + +k+++q+l+d+++  +   +e  +PetL lD++R++++r+++ ++v+++++ll++k+++krdv     
  KHJ34982.1 734 TAHDKVMVDFSRRETEKNNlH---FNKS-TSEKTYVQMLVDVFTNTD---EEAMIPETLILDKNRIIRIRSEVLRIVTCGAILLQCKNVLKRDV----- 820
                 *************99999844...4444.559************963...3345****************************************..... PP

       Tcp11 295 rsslkklkeeilalledees.esgerwtesi..aleiarevskslkessalpdempeaakawLskqlqkvl........sksdpvfkllesrvrkalea 382
                 rss+k +  +i+ +le+ +s e  + + ++i  ale+ r+              mp+a+k  + +++ +++        +  dpv++ll +r+r+++++
  KHJ34982.1 821 RSSWKVEGARIFIVLENVKSqE--QAV-QGIqtALESSRS--------------MPSATKDYIHELVYRTIkasnlrkpHLADPVLRLLMNRLRGYFLT 902
                 89***************85321..122.333336666666..............333333333333333333333444467889*************** PP

       Tcp11 383 rllassasekvretstasekllpaGlsefveeveelaerlaklvsvhwrvfgplYeeilk 442
                 rl   +++ek+r++ ++se+l+  Gl+e ++++ ++++++ +++ v+++++g++Ye+i+k
  KHJ34982.1 903 RLGTRTEREKNRNSYNNSESLVTLGLPEYSQKICDITNEIGRVAIVDREAHGKWYEQIIK 962
                 ****9999*************************************************986 PP

>> VirD1  T-DNA border endonuclease VirD1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.1   7.5e-07    0.0027      15      75 ..     248     308 ..     234     315 .. 0.91

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 7.5e-07
       VirD1  15 rvkiegfkvvstrlrsaeyesfsrqarslglsdsmairvavrriggfleidaetrhkmeai 75 
                   +i+ fk v   + s + e f   ar++g  d + + v + ri+g+ e++ ++ ++m  +
  KHJ34982.1 248 IKTIKEFKAVGITIESVKQEPFDLMARLVGQVDVLMVTVRMLRICGLKELEVQSTNEMANV 308
                 46899***********************************************999999765 PP

>> PET  PET Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   1.9e-05     0.068      17      76 ..     689     749 ..     684     753 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.9e-05
         PET  17 qYmellpeekvPvvgsegekyrkkqllkqLPahDqdvsyCkeL.seeekkeleeFvkkrke 76 
                 +Y ++l ++++P++  + +ky  +q ++qL +  ++++  ++  +  + k + +F+++  e
  KHJ34982.1 689 DYANFLLQQQIPLILANAAKYETHQFMQQLAETNNSLQITENAwKTAHDKVMVDFSRRETE 749
                 7999**********************************99987688999999999987655 PP

>> APOBEC_N  APOBEC-like N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1      0.73   2.6e+03      31      59 ..      99     123 ..      70     139 .. 0.59
   2 ?   13.1   0.3   1.9e-05     0.068      87     146 ..     210     269 ..     191     283 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.73
                 EEEEEEEEEEE-..SS.........TBCHHHHHHHHHH CS
    APOBEC_N  31 klskkGvLrnqsgaaa.........skHaEelfledie 59 
                  +             +          +HaEe+ l++ +
  KHJ34982.1  99 LI-------------EkkkakfavrAAHAEEVRLRAAY 123
                 22.............02222333557899999887655 PP

  == domain 2  score: 13.1 bits;  conditional E-value: 1.9e-05
                 .....HHHHHHHHHHH-TTEEEEEEESE-ST...STSHHHHHH..HHHHHHTTEEEEE--HHHH CS
    APOBEC_N  87 e....Caeklaaflkkeknvelkifvsrlykakwwekpkeaekeglrllkqagveleimkekdf 146
                 +    C+++l+  lk+++ ++++++ sr+ k +w   + +++ + ++ +k+ g+++e  k++ f
  KHJ34982.1 210 HahsyCCKSLYRNLKSQSAISINVAASRIQK-QW---RIYQRIKTIKEFKAVGITIESVKQEPF 269
                 04456************************88.56...66777789************9999886 PP

>> DUF3510  Domain of unknown function (DUF3510)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   1.5       0.1   3.6e+02      54     105 ..     140     191 ..     106     210 .. 0.73
   2 ?   10.1   0.6   0.00023      0.82      48     126 .]     688     771 ..     640     771 .. 0.83
   3 ?   -0.6   0.0      0.46   1.7e+03      10      45 ..     841     875 ..     833     900 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.1
     DUF3510  54 lseevleewlaevleevtsrYletisevlssvk.kteesLkrlkkarkgaaas 105
                 + + ++e++la+++ +++++  + ++e+ +svk k e    +l+k  +++ a+
  KHJ34982.1 140 AAKLAREKILADIAAACAEEVKK-AKEIAESVKeKREAEVHKLRKIIEERLAE 191
                 55556788888888888887555.88999998646788889998887776655 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00023
     DUF3510  48 kesekklseevleewlaevleevtsrYletisevlssvkkteesLkrlkkarkgaaas.....anggeeasDddkirlQlalDV 126
                  ++++ l ++++  +la++++  t++++++++e+ +s + te+ +k   ++    ++      +n + ++s  +k   Q+++DV
  KHJ34982.1 688 LDYANFLLQQQIPLILANAAKYETHQFMQQLAETNNSLQITENAWKTAHDKVMVDFSRretekNNLHFNKSTSEKTYVQMLVDV 771
                 344444778888999*********************************9999999977888776666678999**********8 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.46
     DUF3510  10 aLkqvssiprlyRrtnkevptepSkyvseilkplkt 45 
                 + ++v++i++    + +++p++   y++e++  + +
  KHJ34982.1 841 QEQAVQGIQTALESS-RSMPSATKDYIHELVYRTIK 875
                 556677777766555.99999999999998876655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (983 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1790  (0.0998383); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.75u 0.29s 00:00:01.04 Elapsed: 00:00:00.44
# Mc/sec: 6748.24
//
Query:       KHJ34983.1  [L=330]
Description: putative myb-like dna-binding domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      3e-23   81.7   0.8    2.6e-12   46.7   0.1    2.3  2  Myb_DNA-binding  Myb-like DNA-binding domain
    4.9e-17   61.9   0.9    5.3e-13   49.0   0.0    2.6  2  Myb_DNA-bind_6   Myb-like DNA-binding domain
  ------ inclusion threshold ------
      0.041   14.1   0.0       0.13   12.5   0.0    1.8  2  DUF2774          Protein of unknown function (DUF2774)
        0.1   12.4   0.3       0.23   11.3   0.3    1.6  1  HTH_23           Homeodomain-like domain
       0.13   12.0   0.0       0.27   11.0   0.0    1.5  1  Sigma70_r4_2     Sigma-70, region 4


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.7   0.1   7.2e-16   2.6e-12       1      45 [.       6      51 ..       6      52 .. 0.97
   2 !   33.4   0.1   1.1e-11   3.8e-08       5      43 ..      62     100 ..      59     101 .. 0.95

  Alignments for each domain:
  == domain 1  score: 46.7 bits;  conditional E-value: 7.2e-16
                     CSSSBHHHHHHHHHHHHHHT.TCHHHHHHHHTSS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgkWteeEdelLleavkkhG.nrWkkIaerlggRtekqcrsrwrny 45
                     rg+W++ Ed  L ++v+ +G  +W +Ia+ +g+R++kqcr+r+++ 
       KHJ34983.1  6 RGPWSQAEDAYLCQLVQTQGaLNWVRIAQLIGSRSPKQCRERYHQN 51
                     89*****************************************986 PP

  == domain 2  score: 33.4 bits;  conditional E-value: 1.1e-11
                      BHHHHHHHHHHHHHHTTCHHHHHHHHTSS-HHHHHHHHH CS
  Myb_DNA-binding   5 teeEdelLleavkkhGnrWkkIaerlggRtekqcrsrwr 43 
                      ++eE  ++++ v ++G+rW++Ia+rl gR+++++++ w+
       KHJ34983.1  62 SPEEGAQIERMVSEMGKRWAEIARRLHGRSDNAVKNWWN 100
                      89*********************************9886 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   0.0   1.5e-16   5.3e-13       1      57 [.       9      66 ..       9      69 .. 0.96
   2 !   12.8   0.4     3e-05      0.11       3      45 ..      63     105 ..      62     122 .. 0.83

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 1.5e-16
  Myb_DNA-bind_6  1 WteeEdeiLlklvekygn.dWknIaealnrRtpkqcfdrwknkLrpkisrkkwskeed 57
                    W+++Ed  L +lv+++g  +W  Ia+ ++ R+pkqc++r+++ L+p +++++ s+ee 
      KHJ34983.1  9 WSQAEDAYLCQLVQTQGAlNWVRIAQLIGSRSPKQCRERYHQNLKPTLNHDPISPEEG 66
                    *****************77*********99*************************995 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 3e-05
  Myb_DNA-bind_6   3 eeEdeiLlklvekygndWknIaealnrRtpkqcfdrwknkLrp 45 
                     +eE   + + v+++g+ W +Ia+ l+ R+ +++++ w+ + + 
      KHJ34983.1  63 PEEGAQIERMVSEMGKRWAEIARRLHGRSDNAVKNWWNGSMNR 105
                     67777888899**************66**********996654 PP

>> DUF2774  Protein of unknown function (DUF2774)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       1.3   4.7e+03      14      26 ..      27      39 ..      23      42 .. 0.82
   2 ?   12.5   0.0   3.6e-05      0.13       9      36 ..      72     100 ..      65     115 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 1.3
     DUF2774 14 knFveIAkkldir 26
                +n+v IA+ ++ r
  KHJ34983.1 27 LNWVRIAQLIGSR 39
                699****999865 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 3.6e-05
     DUF2774   9 l.hesgknFveIAkkldirakdvaklwve 36 
                 +  e+gk + eIA++l  r  ++ k w +
  KHJ34983.1  72 MvSEMGKRWAEIARRLHGRSDNAVKNWWN 100
                 669******************99998865 PP

>> HTH_23  Homeodomain-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.3   6.3e-05      0.23      12      37 ..      71      98 ..      67     108 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.3e-05
      HTH_23 12 lllae.GlsvreIAreL.gvsrrTvyrw 37
                +++ e G++++eIAr+L g+s + v +w
  KHJ34983.1 71 RMVSEmGKRWAEIARRLhGRSDNAVKNW 98
                688899***********88********9 PP

>> Sigma70_r4_2  Sigma-70, region 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   7.4e-05      0.27      24      46 ..      75      98 ..      71      99 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 7.4e-05
                  TS---HHHHHHHH.T--HHHHHHH CS
  Sigma70_r4_2 24 leglsykEIAell.gisegtVksr 46
                  + g+  +EIA++l g s+++Vk++
    KHJ34983.1 75 EMGKRWAEIARRLhGRSDNAVKNW 98
                  678899****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (330 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       607  (0.0338558); expected 358.6 (0.02)
Passed bias filter:                      398  (0.0221987); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2438.95
//
Query:       KHJ34984.1  [L=209]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.78   10.0   5.6          3    8.1   5.6    1.9  1  CRA_rpt   Cytoplasmic repetitive antigen (CRA) like repeat


Domain annotation for each model (and alignments):
>> CRA_rpt  Cytoplasmic repetitive antigen (CRA) like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   5.6   0.00017         3      26      36 ..     122     132 ..     104     137 .. 0.56

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00017
     CRA_rpt  26 kvaEaeKrkaa 36 
                 kv+EaeKr+aa
  KHJ34984.1 122 KVVEAEKRRAA 132
                 55555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       748  (0.0417201); expected 358.6 (0.02)
Passed bias filter:                      595  (0.0331865); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 1546.61
//
Query:       KHJ34985.1  [L=126]
Description: hypothetical protein EV44_g4131 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-21   77.4   0.0    3.3e-21   76.0   0.0    1.6  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.0   0.0   1.8e-25   3.3e-21      37     139 ..       1     115 [.       1     125 [. 0.83

  Alignments for each domain:
  == domain 1  score: 76.0 bits;  conditional E-value: 1.8e-25
       RVT_2  37 lvaqGfsqkagedydevfaPvirldsvrLllalaaeeelvvhqldvdsafLnaeldeevyvkqPpG....feidre........eekvykLnkslyGlk 123
                 +va+Gf+q+ g+dy+e+++  +r  s r+l+alaa +e+ v q d  +a+L +el+e++++ q p     f++  e        ++ v++L k lyGlk
  KHJ34985.1   1 MVARGFTQVKGVDYNETSSTTARSASWRILMALAALNEWYVLQADFIAAYLAGELKETIFMEQFPYlkeyFINRPEaatkfgylKDGVIELRKPLYGLK 99 
                 69************************************************************98752222333322222222225679*********** PP

       RVT_2 124 qapllWnekidkvLkk 139
                 q++ +W+eki ++++ 
  KHJ34985.1 100 QSGACWQEKIRSIMRR 115
                 **********998865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (126 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       376  (0.0209716); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.21s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 975.44
//
Query:       KHJ34986.1  [L=902]
Description: putative nop14-like family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.6e-249  830.7  36.3   1.8e-249  830.5  36.3    1.0  1  Nop14     Nop14-like family


Domain annotation for each model (and alignments):
>> Nop14  Nop14-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  830.5  36.3    1e-253  1.8e-249       2     874 ..      49     884 ..      48     885 .. 0.88

  Alignments for each domain:
  == domain 1  score: 830.5 bits;  conditional E-value: 1e-253
       Nop14   2 esirekfNpFevkvn..keKfeVlgrkvkg.ekgrpgvsrskaeekRkktLlkeyqrrnKsggflDrRfGEnDptmtpeekmleRfarEkqrkakkksl 97 
                 + ire+fNpFe k+    +Kfe +++++++ +++rpg+ +s++e+ R++++ +e +r++K+gg+lD+RfGEnDpt++ eekml+Rf+rE+q ++k++sl
  KHJ34986.1  49 TDIREQFNPFEYKTCtpHQKFEAISQNTHKaSVKRPGLVKSRDEQIRRNAYFVEQERKKKVGGILDKRFGENDPTLAIEEKMLQRFTRENQLRHKNNSL 147
                 789**********9889*****99988877689****************************************************************** PP

       Nop14  98 FnLeddeee.eLtHyGqsLsel.....ddfddedl.edddddeeeeegkldakrvreahfgggedeeeeeeeeeperkkskkevmeEvIaKSKlhKaeR 189
                 F+Led ee  eLtH+G+ Ls       ddf+++dl  +d++++  e++ l ++   +++ +g++ ee      ++erkksk+e+m+E+IaKSKl+K+eR
  KHJ34986.1 148 FDLEDAEEFgELTHMGRALSLDkkvpvDDFEEQDLrTSDSEEHLPEDQSLAKRKWPDENSKGESLEE----VSAQERKKSKQEIMKEIIAKSKLYKYER 242
                 ******9999*********77466777*******977677744444444444444444444444433....479************************* PP

       Nop14 190 qkekeedeelreeLDkelkdlrsllsstkkpkseeakkeeekekkekksagkdkeeaddeYDklvreLafdkRAkPsdRtKteEElakeekerLeklEe 288
                 q++k+ede+lreeLDk++ dl++ l++ ++++  +++++    ++++ +   dk++ d+eYD+++r+La dkR++P+++ Kte+E+a+e++ +L++lE 
  KHJ34986.1 243 QAAKDEDEDLREELDKQMTDLQGILRKINPQSI-HSSEPLGI-DRKTVQIDIDKTKLDKEYDIRLRQLALDKRSMPTEKSKTEDEIAAERASKLQELEL 339
                 **************************9776666.43333333.555666999*********************************************** PP

       Nop14 289 eRlkRMrgeedeeeeeekkkkkkkeasaDdldddfvleeeeeeeefglgkglka..taeeeeeededdfeedddlveseseeeeeeeeedeeeeedeee 385
                 +Rl+RM+g++d ++++++k+ ++              e++e++e++g+g+g+ka     +++ eded+f++d+dlv+s+s+ e     +d e+++  ++
  KHJ34986.1 340 KRLRRMQGKSDISDDDNEKEIENY-------------ESDEDNEDIGFGNGIKArsPIVDLGIEDEDEFIIDSDLVASDSDLEI---TQDVESNSYADK 422
                 *********888888877766665.............3345667789999996655444679*******************877...444444444444 PP

       Nop14 386 eeeeeededdlsdleseeeeeedeleeelleeekkaaeekkekkkkkkkseekakeelpytfpcPesheellellekreisaedlptvvqRIralhhps 484
                     e+d++ l d       e+ el e    ++ +a+++     + +  s++++ ++l y fpcP+shee+l+++e  +++ +dlptvv RIr l+ p+
  KHJ34986.1 423 FGWTESDDNLLADVLLG---ENPELLE----QSLDANAT----INFNGISDQATTSNLSYQFPCPQSHEEFLKITE--NVELQDLPTVVRRIRILYSPK 508
                 44344455555554433...3444322....22211111....13457788889999*******************..77******************* PP

       Nop14 485 LaeeNKeklqkflavLlqhiaylasqeeappfailesLvrhlhsLaksfpeeaaeafrekLkemqkelekklakgkkktwPslsdLilLkligliFptS 583
                 L++eNK kl +f+ +L++h++ la+qe++ppf++le L+rh+hsL+k+fp e++++fr++Lk+++  ++++ ++g         dLil+++ig+iFptS
  KHJ34986.1 509 LQSENKIKLRDFSVALIDHVLFLANQEAKPPFNVLEALIRHIHSLSKTFPVEISNCFRRHLKDLNFCRALSPKPG---------DLILITAIGVIFPTS 598
                 ****************************999*********************************99777766666.........*************** PP

       Nop14 584 DfrHpVvtPallliaeyLgqarirslsdlasglflctlvlqyqslSkRyvPEvinfllnlllllapkkskkkvpgvfpvkevkpsellelkeleekskk 682
                 D++H+VvtPa+l i++yLg + ++ l ++a+g++lctl++ +q+ S+Ry+PEv+nf++n+l++lap k++ k++  fp+++  p+++l+lk+  +    
  KHJ34986.1 599 DHFHQVVTPAMLSITRYLGLKIPEYLYEYAIGSYLCTLCIHFQRASRRYIPEVMNFIQNALCVLAPLKMS-KLSREFPYHK--PKHSLRLKRAVQ---- 690
                 *******************************************************************999.99********..889777775543.... PP

       Nop14 683 ekkqrklslsdllk..eesskeeseqlklsllstalsllekfaelyseksafveifepilkllkklk..lkkkklpeelqekleellaklerllkkale 777
                   +++kl++ dl+   +  + +e+e++k+sl+++ l+ll+++a+++s+k+af e+f+   k++++l    +  + ++++q  l++l++kl+ ll++++ 
  KHJ34986.1 691 --SSKKLEFYDLIMkkDIVEGDEKESMKISLINVNLKLLDAAADIWSSKEAFNEVFQSPFKIIEQLVstDCILHSQSDTQMILDQLIQKLSLLLSQSKI 787
                 ..2379*****9997766778999*****************************************98777777888999******************** PP

       Nop14 778 sRrpLelqkhkplaiktlePkFeeeydpdkkydpdreraelaKLkaelKkErKGAiRELRKDaqFlareklkekkekdaeyekkvkrivaelqseeg 874
                 sRrpLel++h+plaikt +PkFee ++p+++ydpd++r+e+aKLk+e+K+E+KG+iRELRKDa+  a ++lkekke+da+yekk+kr++ae+qseeg
  KHJ34986.1 788 SRRPLELHHHRPLAIKTSIPKFEEFFNPERHYDPDATRTEIAKLKKEHKREKKGTIRELRKDAKTHAIQSLKEKKERDAAYEKKYKRLIAEIQSEEG 884
                 ************************************************************************************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (902 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1559  (0.0869541); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.22s 00:00:00.97 Elapsed: 00:00:00.40
# Mc/sec: 6725.65
//
Query:       KHJ34987.1  [L=369]
Description: putative ascorbate peroxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.9e-50  170.3   0.0    7.3e-50  169.8   0.0    1.3  1  peroxidase  Peroxidase


Domain annotation for each model (and alignments):
>> peroxidase  Peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.8   0.0   4.1e-54   7.3e-50      11     229 .]     112     333 ..     101     333 .. 0.90

  Alignments for each domain:
  == domain 1  score: 169.8 bits;  conditional E-value: 4.1e-54
                 C....TTTHCHHHHHHHHHHHTT.......SSTTSCHHHTCCHHCSGGGTTTHHHHHHHHHHHHHCTT.....S-HHHHHHHHHHHHHHCTT--..--E CS
  peroxidase  11 a....drdmgpsllrlafhdcfv.......gGcdgsvlllepektapaNaslrkgldvldaikakleaacpgvvScADlialaardavelaggplvpvs 98 
                 +    d+++gp llrla+h +++       gG +g+++++ pe++++aNa+l +++d+l+++k+k+++     ++++Dl++la+ +a+++++gp++p++
  KHJ34987.1 112 KddydDGSYGPVLLRLAWHASGTydkatgtGGSNGATMRFPPESEHGANAGLISARDFLEPVKQKFPW-----ITYSDLWTLAGVVAIQEMQGPIIPWR 205
                 24555899************9999999999**************************************.....*********************99*** PP

                 E---S-SSGGGS-S...-.-TS-HHHHHHHHHHHT--HHHHHHHHGGGGC-EESHH...........SS-GGGT....HHS.........EETS-STHH CS
  peroxidase  99 lGRrDatessasevsnlPdptasvdelrdkfarkgltdeelvaLsGaHtiGkahcssfsrlyaaadpaldaayaaekCasgntelvdld.tptkfdnsy 196
                 +GR+D+ +s  +    lPd t+  ++lrd f r+g++d+e+vaLsGaH++G++h     r           ++++           +   +pt+f+n+y
  KHJ34987.1 206 PGRQDKDVSACTPDGRLPDATQGSKHLRDIFGRMGFNDQEIVALSGAHALGRCHTD---RS----------GFEG-----------PWTfSPTTFTNDY 280
                 *********9954459**************************************33...22..........2221...........122399******* PP

                 HHHHCC....................T-EEEHHHHHHHHSCCCHHHHHHCCC- CS
  peroxidase 197 fknlle....................krgllrsDqvllsdsetralvekyaes 229
                 f+ ll+                    + ++l++D++l+sd++++++v kya++
  KHJ34987.1 281 FRLLLDekwkerkwngpkqyedkttkSLMMLPTDMSLVSDKSFKQWVTKYARN 333
                 ***************************************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      334  (0.018629); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 2935.94
//
Query:       KHJ34988.1  [L=317]
Description: putative cytoskeleton-associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.052   11.7   0.0      0.074   11.2   0.0    1.1  1  EzrA      Septation ring formation regulator, EzrA
       0.19   12.2   0.2        0.5   10.8   0.0    1.8  2  HEAT_2    HEAT repeats


Domain annotation for each model (and alignments):
>> EzrA  Septation ring formation regulator, EzrA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   8.3e-06     0.074     433     479 ..     203     249 ..     201     252 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 8.3e-06
                 -SS-S-TTTHHHHSTTTSTTTHHHHHHHT-TT--HHHHHHHHHTTTT CS
        EzrA 433 snLPgiPesyleelkeasdeieelakeLekkpinikevnkrldeard 479
                 sn+P   +++ + l+e+++++++++  L++ p+ +k+++k    a++
  KHJ34988.1 203 SNIPKRQKNFAKFLQETNQKLNDIVTPLSQDPLGMKQLQKSKLVAEN 249
                 799999********************************998766665 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   5.6e-05       0.5       3      59 ..      63     120 ..      61     142 .. 0.86
   2 ?   -2.3   0.1      0.67     6e+03      71      82 ..     282     293 ..     279     298 .. 0.51

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 5.6e-05
      HEAT_2   3 aLlqalendpdpevrraairaLg..rignpealpaLvellededpavRraaaeaLgaig 59 
                 +L ++l ++p++++r ++   +    +++++++ +++++++ ++ ++R+  ++aL  i 
  KHJ34988.1  63 TLEKLL-DSPNWDIRGTTSTIICerALHDETTFTTILRYVSRAEYDIREKGIRALNLIL 120
                 678888.9********99999996557999*************************8764 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.67
      HEAT_2  71 lddddddvvRea 82 
                 +++ ++++vR++
  KHJ34988.1 282 VQTNSNEYVRRR 293
                 445555555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (317 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       610  (0.0340231); expected 358.6 (0.02)
Passed bias filter:                      545  (0.0303977); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.27s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2344.70
//
Query:       KHJ34989.1  [L=236]
Description: putative cation transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-51  173.1   0.2      5e-37  127.7   0.0    2.0  2  ChaC      ChaC-like protein


Domain annotation for each model (and alignments):
>> ChaC  ChaC-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4   1.3   4.2e-15   7.5e-11       1      35 [.      12      46 ..      12      50 .. 0.95
   2 !  127.7   0.0   2.8e-41     5e-37      32     177 ..      77     229 ..      75     231 .. 0.93

  Alignments for each domain:
  == domain 1  score: 42.4 bits;  conditional E-value: 4.2e-15
                EEEEESSHHHHS--TT-SEEEEEEEETEEEEEEEE CS
        ChaC  1 lwvfgYGSLiwkpdfeytesrravihgyaRrfwls 35
                +w+fgYGS iwkp+  ++++++++++gy Rrfw+ 
  KHJ34989.1 12 FWLFGYGSFIWKPPPYFDKQIPGYVMGYLRRFWQV 46
                6********************************96 PP

  == domain 2  score: 127.7 bits;  conditional E-value: 2.8e-41
                 EEEEESSSSS-SSS-EEEEEEEEHHH.............-EEEEEEEEE-GGGGGGGGGGGGGSTT..TTEEEEEEEEEE-EETTTS-EEEEEEEEEE- CS
        ChaC  32 fwlsstdhRGteekPGrvltLiedee.............gstiGvvyripaeeaeevleyLeeRElvtnGytlkevevylkkdakeekvvlealvyvat 117
                 + +ss+dhRGt+e+PGrv+tLie                ++++G++y+i+a++ +ev+e L+ RE+  nGy++k++ + + kd ++e+  +++ vy++t
  KHJ34989.1  77 LHVSSEDHRGTPENPGRVVTLIER-SfwnilddiepvpdEKVWGIAYHIEASKVAEVRECLDLREI--NGYSMKKILFNP-KD-TKET--MQVFVYIGT 168
                 67899******************7.5599************************************8..**********98.44.3444..489****** PP

                 TTSTTB--S--HHHHHHHHHH-EETTEEHHHHHHHHHHHHHTS--.---BHHHHHHHHHHH CS
        ChaC 118 ikneqyagdedleeiAkviaaaaGpsGsnaeYlfelakaleklgi.girDehLeeleelvk 177
                 ++n+q++g+++le+iA++i +++G sGsn eYl+ l++al++l++ ++rD h+++l++ ++
  KHJ34989.1 169 PSNPQFTGPQQLESIAEIINKSTGISGSNREYLLCLEDALNRLSPpQSRDAHITKLANVIR 229
                 *******************************************9945*********99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (236 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1760.16
//
Query:       KHJ34990.1  [L=405]
Description: putative serine threonine protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      6e-38  130.7   0.0    6.7e-21   74.8   0.0    2.3  2  Pkinase      Protein kinase domain
    2.5e-16   59.8   0.0    3.5e-07   29.8   0.0    2.8  2  Pkinase_Tyr  Protein tyrosine kinase
     0.0035   17.3   0.0     0.0068   16.3   0.0    1.5  1  APH          Phosphotransferase enzyme family
  ------ inclusion threshold ------
      0.054   12.8   0.0          5    6.3   0.0    2.2  2  Kinase-like  Kinase-like


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.0   4.1e-18   1.8e-14       3     116 ..      31     155 ..      29     157 .. 0.93
   2 !   74.8   0.0   1.5e-24   6.7e-21     120     259 ..     233     394 ..     178     397 .. 0.83

  Alignments for each domain:
  == domain 1  score: 53.7 bits;  conditional E-value: 4.1e-18
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEE.......SSEEEEEEE--TTEBHHHHHH... CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfee.......kdelylvleyveggeladlle... 90 
                   + lGeG+f+ Vy + + +t+  +A+Kki+ +  +++ +  +++E++  k +  hpni++++++           +++y++l y + g+l+d+++   
  KHJ34990.1  31 ISRLLGEGGFSYVYLVQDVNTEALYALKKIRCSFGQESVN-LAMKEVEAYKIFApHPNIIKCIDYSVLsdrsdpgVKTVYIILPYYRRGNLQDIINanl 128
                 5789*****************************9988775.9********************9976666699999999******************999 PP

                 .HHSS--HHHHHHHHHHHHHHHHHHHH CS
     Pkinase  91 .rkgslseeeakkiakqilegleylHs 116
                  +++s++e+++  ++  ++++l+ +H+
  KHJ34990.1 129 vNHTSFPEKQLMVLFLGVCRALKAMHD 155
                 9999**********************7 PP

  == domain 2  score: 74.8 bits;  conditional E-value: 1.5e-24
                 E-SS-SGGGEEEETTTE.EEE-SGTTSEESSSSCS..........BCTTTSCGGGS-HHHH...TTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHH CS
     Pkinase 120 iHrDlKpeNiLidekge.lKitDFGlakelesssk..........ltsfvgtseYlAPEvl...keneyskkvDvWslGvilyelltgkppfsgekgke 204
                  HrD+Kp Ni+id++ge   ++D+G  +      +          +  +  t  Y+APE+    +++++++kvD+WslG++ly  l gk pf+ +++++
  KHJ34990.1 233 AHRDIKPGNIMIDDDGEqPILMDLGSIAPSPIAITsrslalavqdTAAEHSTMPYRAPELFdvkTGSNIDTKVDIWSLGCTLYACLIGKSPFEMRSDET 331
                 7************77776999****8664433333446799999999999***********99888999************************666666 PP

                 HHHHHHHTHHHHHHHCT..............SHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHH CS
     Pkinase 205 kvekeldqlekilkilg..............etkeklpeaseiseeakdllkkllkkdpkkRltaeell 259
                   +  +        + g              ++k   +  sei+e+++++++k+lk++p++R+ ++el+
  KHJ34990.1 332 GGSLSICV------LSGdwrfpdegnggkkaKSKAVKEPISEINESIREVVRKCLKVEPTERPDVNELI 394
                 44444444......33344445567787665555555666777********************999886 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.0   7.8e-11   3.5e-07       1     120 [.      29     154 ..      29     161 .. 0.89
   2 !   26.4   0.0   8.5e-10   3.8e-06     124     256 ..     232     394 ..     228     397 .. 0.73

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 7.8e-11
                  EEEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEE...SSSS....EEEEEE--TTEBHHH CS
  Pkinase_Tyr   1 lelgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvct...keep....llivteyvkgGdLlk 90 
                  l++++ lGeG f+ V+  +      ++e   a+K+++ +  +e+ +  ++e++  k +  hpni+k++   +   +++p    ++i++ y + G+L++
   KHJ34990.1  29 LKISRLLGEGGFSYVYLVQDV----NTEALYALKKIRCSFGQESVNLAMKEVEAYKIFaPHPNIIKCIDYSVlsdRSDPgvktVYIILPYYRRGNLQD 122
                  678999**********98877....89999*************************************9998865533347778*************** PP

                  HHHHT..CTTTSBHHHHHHHHHHHHHHHHHHH CS
  Pkinase_Tyr  91 fLrkk..ekekltlkdllsfalqvAkGmeyLe 120
                   ++++  +++++  k+l+ + l v+++++ ++
   KHJ34990.1 123 IINANlvNHTSFPEKQLMVLFLGVCRALKAMH 154
                  ****9777888889999999999999998665 PP

  == domain 2  score: 26.4 bits;  conditional E-value: 8.5e-10
                  EEEST-SGGGEEEEE..............TTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSE...EEHHHHHHHHHHHHHHHHTTSSG CS
  Pkinase_Tyr 124 lvHrdlaarNvLlse..............nkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekk...ftsksDvWsfGvllwEiftlges 204
                  + Hrd+   N+++++               + + i+   La ++      +++  ++  + + apE ++ k+   + +k D+Ws G +l+  +  g+s
   KHJ34990.1 232 YAHRDIKPGNIMIDDdgeqpilmdlgsiaPSPIAITSRSLALAV------QDTAAEHSTMPYRAPELFDVKTgsnIDTKVDIWSLGCTLYACLI-GKS 322
                  78***********9966665554443333333334443443333......5555666788999****998877789**************9887.*** PP

                  T....................TTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 205 p....................ypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselv 256
                  p                    ++  ++ +  +k k++   e  ++++e++ e+++kc++ +p+eRp+ +el+
   KHJ34990.1 323 PfemrsdetggslsicvlsgdWRFPDEGNGGKKAKSKAVKEPISEINESIREVVRKCLKVEPTERPDVNELI 394
                  *7777777777777777666422223333566777777777778999*********************9997 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   1.5e-06    0.0068      13     200 ..      43     263 ..      33     266 .. 0.51

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.5e-06
                 EEEEEETT-..-EEEEEE-TT...S-HHHHHHHHHHHHHHHHTT-B--B-CTTB.S-EEETTE...EEEEEE----EE-SS........HHHHHHHHHH CS
         APH  13 tylvttpag..ryvlrrnppa...raaeeirrevallrlLakagvpvPevlagd.tddeeigl...lfalieyvpgrsllr........klsaaqlpel 94 
                 +ylv++ ++   y+l+ ++ +   ++ + + +ev+ ++ +a + + + +++++   +d   +    ++ +++y     l +        + s ++++ +
  KHJ34990.1  43 VYLVQDVNTeaLYALKKIRCSfgqESVNLAMKEVEAYKIFAPH-PNIIKCIDYSvLSDRSDPGvktVYIILPYYRRGNLQDiinanlvnHTSFPEKQLM 140
                 5666655532466666666666666666666666666666666.3355666544222222222444555555555555555555666664444444444 PP

                 HHHHH..HHHCCHHCH.-STTTB-SHHCHTCCHH................HHHHCHHH.CCCGCCTCCHHHHHHHH..HHHHHHHH--SSS-EEEE-SS CS
         APH  95 lealg..eflaalhqvdpaalpladflaqdlell................rqlesata.rllaselldlleeleeq..vlaalaallpgelptvllHgD 172
                 +  lg  ++l+a+h+++ ++ + + ++ + ++                  + ++s++   +  s+++  +++l +   + + +++   g   +   H+D
  KHJ34990.1 141 VLFLGvcRALKAMHDFGERNKRSDNEGQKKIKKRndlsalslnqemnaksEHINSSREtKDNTSDNE--QQKLLSDesLTQDHEESISG-KVEAYAHRD 236
                 4444411666688888655555554444333333112222222222222222222211111222222..22222223377777777776.889999*** PP

                 -SGGGEEEC...TTEEEEE---TT-EEEE CS
         APH 173 lhpgNllvd.pddgrvtGviDfedaglgp 200
                 ++pgN+++d ++++++  + D++   ++p
  KHJ34990.1 237 IKPGNIMIDdDGEQPI--LMDLGSIAPSP 263
                 *********6666666..88877666666 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0    0.0045        20      12      44 ..      27      59 ..      19      80 .. 0.81
   2 ?    6.3   0.0    0.0011         5     219     261 ..     293     335 ..     267     387 .. 0.74

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0045
  Kinase-like 12 rtlvrgellkkgdrsvvfevkdqetgeplavkv 44
                   l+   ll++g++s v++v+d++t    a+k 
   KHJ34990.1 27 YSLKISRLLGEGGFSYVYLVQDVNTEALYALKK 59
                 5688899*****************988777775 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0011
  Kinase-like 219 ytrknktkmthkldaWqlGlviyriwclklPltlateeakeew 261
                  +  k   ++  k+d W lG + y     k P++   +e + + 
   KHJ34990.1 293 FDVKTGSNIDTKVDIWSLGCTLYACLIGKSPFEMRSDETGGSL 335
                  444555788899************9999****99999988875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1359  (0.075799); expected 358.6 (0.02)
Passed bias filter:                      696  (0.0388198); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.44
# Mc/sec: 2736.07
//
Query:       KHJ34991.1  [L=290]
Description: putative inorganic pyrophosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.4e-58  196.0   0.1    4.3e-58  195.7   0.1    1.1  1  Pyrophosphatase  Inorganic pyrophosphatase


Domain annotation for each model (and alignments):
>> Pyrophosphatase  Inorganic pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.7   0.1   2.4e-62   4.3e-58       1     160 []      48     230 ..      48     230 .. 0.97

  Alignments for each domain:
  == domain 1  score: 195.7 bits;  conditional E-value: 2.4e-62
                      EEEEE-TTCSEEEEEETTT...........TEEEEEEE-SSSB-BSSEEEEETT--BT.......CCBEETSSSEEEEEESSS---TTEEEEEE CS
  Pyrophosphatase   1 vvvEiprgsnaKyeidkee...........gklrldrvlftskgypanYGfipqTled.......telkGDgDPlDvlvlgeeplspgevvevk 76 
                      ++vEipr++naK+ei ke+           gklr++r++f++kgy +nYG++pqT+ed       t++kGD+DPlDv+++ge   +pg++++vk
       KHJ34991.1  48 MIVEIPRWTNAKLEICKEQalnpikqdtkkGKLRFVRNCFPHKGYLWNYGAFPQTWEDpnvihpeTKAKGDNDPLDVCEIGELVGYPGQIKQVK 141
                      89*******************************************************************************9999********* PP

                      EEEEEEEEETTEEEEEEEEEETTSGGGTT-SSGGG....STHHHHHHHHHHHHHTTTTSCCT-SE.EEE.EEEEHHHHHHHHHHHHHHHH CS
  Pyrophosphatase  77 vlGvlamiDegetDdKiiavpvkdprlkkindied....lpgllleeiehfFetykdlegkkknv.kve.ewkdkeeAekvieeaheryk 160
                      vlGv+a++De+etD+K+i+++v+dp  +k+ndied    lpgll ++++++F+ yk+++gk +n+ +++ e+k+k++A ++++e+ e+++
       KHJ34991.1 142 VLGVMALLDEEETDWKVIVIDVNDPLASKLNDIEDverhLPGLL-RATNEWFRIYKIPDGKPENQfAFTgECKNKKYATDIVHECSEAWE 230
                      *************************77********999888888.***************966888***9*****************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (290 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       342  (0.0190752); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 2314.12
//
Query:       KHJ34992.1  [L=307]
Description: putative sec20 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-12   47.7   3.6    1.1e-12   47.6   0.7    2.5  3  Sec20        Sec20
  ------ inclusion threshold ------
       0.03   13.8   3.1       0.44   10.0   0.2    2.1  2  KTI12        Chromatin associated protein KTI12
      0.045   12.6   0.3      0.055   12.3   0.3    1.1  1  NMDAR2_C     N-methyl D-aspartate receptor 2B3 C-terminus


Domain annotation for each model (and alignments):
>> Sec20  Sec20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1      0.36   2.2e+03      30      64 ..      31      66 ..       9      74 .. 0.46
   2 ?   -1.8   0.1      0.51     3e+03      26      47 ..      59      80 ..      49      83 .. 0.73
   3 !   47.6   0.7   1.9e-16   1.1e-12       3      92 .]     191     280 ..     189     280 .. 0.97

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.36
       Sec20 30 eldastkslekleeeykqvedvlsr.skklvkkler 64
                e++  +  l +   +y + ++vls   +++++++++
  KHJ34992.1 31 EFQPGSVPLLDYGGDYENNDGVLSElVAEILQMIKE 66
                333333344444455555555554314555555555 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 0.51
       Sec20 26 enleeldastkslekleeeykq 47
                e l+ ++++ ++le l+ee ++
  KHJ34992.1 59 EILQMIKEQEEDLELLKEEIHD 80
                4567777888888888877665 PP

  == domain 3  score: 47.6 bits;  conditional E-value: 1.9e-16
       Sec20   3 akqiTeslraisqllsqevqqSeenleeldastkslekleeeykqvedvlsrskklvkklerrdktdkllvflalglflacvvyvvkkRi 92 
                 a+++   lr+ ++l+++e  +S+ + ++l+ st+ l +l + y  ++++l +s++lv +l r +k+d   +  a+ ++l ++ ++v++R+
  KHJ34992.1 191 ASEVITVLRRTHNLMANELSRSQFANDTLKGSTEALAQLAQTYSTLDTLLLTSRNLVGTLLRTQKSDTWYLETAFYILLSTICWLVFRRL 280
                 5778889**********************************************************************************7 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.2    0.0041        24     200     257 ..      54     125 ..      44     145 .. 0.59
   2 ?   10.0   0.2   7.3e-05      0.44     139     213 ..     167     257 ..     162     263 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.0041
                 HHHHHHHHH....HTT--HHH...............................HHHHHHHHHHHHHHHT.TSSS CS
       KTI12 200 seivkeileaqksavaidklt...............lpgsseslelpakkltlaeLsrlrrqFvklnkaklen 257
                 se v+eil+ +k++++  +l                l  ++e+l+++ + lt+aeL+ + ++F + + ++++ 
  KHJ34992.1  54 SELVAEILQMIKEQEEDLELLkeeihdlnpgrsdvlLIRQQEELNVQVQ-LTIAELKTHHKSFQRAQLSAKRR 125
                 5555666665554444333334666666444444443466777888888.*************5554433333 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 7.3e-05
                 -TTSS-GGGS-SEEEE.TTS---H.HHHHHHH...............HHHHTS--SSSTT-------HHHHHHHHHHHHHHHHHHH....H CS
       KTI12 139 ePdsknrWDsPlftvlsaeeklpl.deilkal...............iekkklkpnqatlskplaeanflqeLdketseivkeileaqksa 213
                 +P +knr  +Pl+++++ e++++   e++ +l               + ++ lk +++ l++ +++ ++l++L  + ++ v ++l+ qks 
  KHJ34992.1 167 HPLKKNRQQRPLLSLSNEEKEINAaSEVITVLrrthnlmanelsrsqFANDTLKGSTEALAQLAQTYSTLDTLLLTSRNLVGTLLRTQKSD 257
                 6999************866666552456666688888888888888899999999999999999999999999999999999999988875 PP

>> NMDAR2_C  N-methyl D-aspartate receptor 2B3 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.3   9.3e-06     0.055     203     281 ..     116     202 ..      84     234 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 9.3e-06
                 XXXXXXXXXXXXXXX........XXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXX CS
    NMDAR2_C 203 keeladeygkfslKs........qrylpeenirSDvSdiSsravsykdlegna.kkrkkykdslkKRsasaksrreldevelsyrkrk 281
                 +    + ++++++          q+yl   +i SD  + Ss + ++++le++  kk++++   l   s   k     +ev   +r+++
  KHJ34992.1 116 QRAQLSAKRRLEMARtqervaltQSYLEYAQIYSDSTNLSSSPLTFTELENHPlKKNRQQ-RPLLSLSNEEKEINAASEVITVLRRTH 202
                 22222222223332244555555*****************************95555555.555566777777777788877666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1277  (0.0712254); expected 358.6 (0.02)
Passed bias filter:                      483  (0.0269396); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.37
# Mc/sec: 2486.00
//
Query:       KHJ34993.1  [L=1352]
Description: putative c2 domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-19   71.1   2.7    9.8e-17   61.5   2.7    2.7  1  Membr_traf_MHD  Munc13 (mammalian uncoordinated) homology dom
    1.4e-13   51.0   0.0    3.1e-13   49.9   0.0    1.6  1  C2              C2 domain
    1.1e-07   30.8   1.4    1.1e-07   30.8   1.4    1.8  2  DUF810          Plant family of unknown function (DUF810)


Domain annotation for each model (and alignments):
>> Membr_traf_MHD  Munc13 (mammalian uncoordinated) homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.5   2.7   1.6e-20   9.8e-17       1     148 [.    1106    1225 ..    1106    1226 .. 0.93

  Alignments for each domain:
  == domain 1  score: 61.5 bits;  conditional E-value: 1.6e-20
  Membr_traf_MHD    1 dvlrPLmdyLdsnLsilaqalektvLkrvlkelWkvvlnalekllLPplsdakskkkssslwenanaakkleslsklllsmvreevsgfeksL 93  
                      ++l+PL+ y+d+n++i++++l+++ +  v+ +lWk vl ale ll Pplsd+ s                                  ++k+L
      KHJ34993.1 1106 NALKPLFTYFDENFAIMKETLTEDSMVMVMNRLWKEVLLALECLLVPPLSDKLS----------------------------------SQKPL 1164
                      68************************************************9763..................................489** PP

  Membr_traf_MHD   94 tpkevevleaaLdtlkdfFha......gGeGlkkeaLkseelqsLllalslYdqstdeLik 148 
                      ++ e +v++++L+ l dfFha      +  G++ + Lks+++++L     +Y  +td+Li+
      KHJ34993.1 1165 SQHELDVVFKWLELLFDFFHArddhtgEAMGVPANVLKSPKYHELASLNFFYFDTTDNLIR 1225
                      ********************9555544568*****************************96 PP

>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   0.0   5.1e-17   3.1e-13       3      92 ..     913    1001 ..     911    1014 .. 0.89

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 5.1e-17
                  EEEEEEEEESSSSSSTTSSCEEEEEEEE.ECEEEEEE-SCSSSSSSEEEEEEEEEESCHTTSEEEEEEEEECSSSTEEEEEEEEEEGHHHH CS
          C2    3 levtvieAknLpnkdkkgssdpyvkvsl.dgkqkakTrviknslnPvWnekftfevaeleeakLeveVfdndrlskddfiGkveiplstll 92  
                  ++++++eA+++++ d++g+sd+yv++    +k+ akTrvi +sl P+W+e++ + v+      +  +++d+d +++++ iG+++++l+ ++
  KHJ34993.1  913 FTIKIVEAEDIKACDANGTSDSYVVLGDeFQKRLAKTRVIVKSLYPRWDESIDITVQG--PLNIIATIWDWDAFGDHEYIGRTSLKLDPIH 1001
                  689***********************87669***********************9999..899************************9944 PP

>> DUF810  Plant family of unknown function (DUF810)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   1.4   1.9e-11   1.1e-07     519     686 .]     713     885 ..     691     885 .. 0.79
   2 ?   -3.8   0.3      0.55   3.3e+03      96     144 ..    1046    1093 ..    1043    1095 .. 0.75

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 1.9e-11
      DUF810 519 pYevesvianlvkkWvkerlkklkewveraleqEtW.....ePksk...qeryaqSavellriieetvdeffelpv...pmkeellqdLldgldkllqe 606
                  +++e+++a++v +W++   +++ e v++a+++ +      +P  +   + r++ S+++++r+ +etv+++f+l+        e + +L + + + +  
  KHJ34993.1 713 AFNIEELLADFVWRWIQVADSRMVELVDQAIKHDNFevrphNPTNSvidDRRHSVSIIDVFRLFNETVNQIFQLNWdndVQYAEFMTALSKSFGTGIAR 811
                 699****************************999873322246554444789***********************9543344567889999999999** PP

      DUF810 607 Ylskvasslg.skeslvPslPaLTRckedsklkklwkkkavepclldekrksklnslgtqkLcvrLNTLhyllsqleslek 686
                 Y++++++    + ++l P+  a    +++ k ++l+k +     ++++  +     +  ++  v+LN +++ l+ql+ lek
  KHJ34993.1 812 YCERIEQMFSkEMDRLSPAQEAVVLQTKQEKWMQLAKDAW---NNKEKIEPF----QFYPESLVKLNNIEFALQQLDILEK 885
                 ******5544234578999999999999999889999888...222223333....3567888***************997 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 0.55
      DUF810   96 rlrktLlrilvgqvgrradtivlpLeLLrqlkksdFsdekeyeaWqkRq 144 
                  r+ + + ri++ ++++ ++t +l+ e Lrql +   s +   + W+ Rq
  KHJ34993.1 1046 RTERDMTRIITDKLSQYINT-CLSQEALRQLLSRGLSVAAVTNLWKSRQ 1093
                  67778888888888777765.6788888888888888888888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1352 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       803  (0.0447878); expected 358.6 (0.02)
Passed bias filter:                      564  (0.0314574); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.87u 0.28s 00:00:01.14 Elapsed: 00:00:00.44
# Mc/sec: 9306.97
//
Query:       KHJ34994.1  [L=540]
Description: putative histidine acid phosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-45  156.1   0.0    1.9e-45  155.9   0.0    1.1  1  His_Phos_2  Histidine phosphatase superfamily (branch 2)


Domain annotation for each model (and alignments):
>> His_Phos_2  Histidine phosphatase superfamily (branch 2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  155.9   0.0   1.1e-49   1.9e-45       2     381 ..     123     475 ..     122     477 .. 0.88

  Alignments for each domain:
  == domain 1  score: 155.9 bits;  conditional E-value: 1.1e-49
                 EEEEEEEEE--SBB-SHHHHHHHHHHHHHHHH.........HHCHHTGCCGGGGT.........--SSSTTS..B-HHHHHHHHHHHHHHHHHCHTCCH CS
  His_Phos_2   2 LksvvvviRHGdRtPkqkvkksvtspiflsllkkhkeKlkqlktalekkghfpgtyrkveveklqlilkwgg.elthaGrkqaeelGrqfrqrYplgLl 99 
                 + +v+v++RHG+R+P++  ++    ++++++  kh       k +  + ++f++           +  k+g+  l++ Gr+++++ G+  + +Y  +L+
  KHJ34994.1 123 IAQVQVLSRHGARYPTTGDNV----LKLAEKIAKHS-----GKFKATGDLAFLN----------DWKYKLGQsILVPKGRQELFNNGILHYYQYG-QLY 201
                 679**************9975....44444554454.....789999******8..........5566666656*********************.*** PP

                 TTSS--TTEEEEEESSHHHHHHHHHHHHHHCHCCC---S-TTSTTGGG-TTTTCCCEEEHHHHCCCCHHCTTSHHTCHHHCHHHTGGHCHHHHCHCCCC CS
  His_Phos_2 100 rlhltykdlkirassegRviaSAaafakGllglegeltdllskdkdllddsnaakdlldeakkklkelltegaeacpafewpikvakrvdelvkylked 198
                 ++++   ++ +r++ ++R+++SA++f++G++gl                ++na   ++ e  +++ +++++g+++c++  +    +  ++++++++ e+
  KHJ34994.1 202 NPES---KIIVRTTTQDRMLKSAENFMTGFFGLSW--------------TQNATIEVIIE--ATGFNNSLAGYKNCENAIN--FRSSGGKNASDEWVEI 279
                 **95...9***********************6665..............9**********..99*************9977..89999*********** PP

                 CHHHHHHHCHHHCTTEEEE-HHHHHHHHHHHHHHHHHHCT-TTGGGCTH..HCHHHHHHHHHHHHHHHC........TTTCCCCHHHHHHHHHHHHHHH CS
  His_Phos_2 199 mdeniakrleqlcpgesnllakerwdklercfyeknkfdiskicdlydemkydalhnrylkdleelyklakvipqEygigpeeklkiGllllnpllkki 297
                 + + +++r+++ + g  +++  ++++   +c ye+ ++++s +c+l++   ++++ ++y  dl               ++++++++ G++++++ ++++
  KHJ34994.1 280 YLQDATSRFQSSLEGI-EWDVMDTYAAQTMCPYETVAYGYSAFCELFTY--EEWEGFEYAIDLWFAGSS--------AFQSPTGRAVGIGYVQETVARL 367
                 ***************8.********************************..************866666........9********************* PP

                 CTSSSEECCS..........CCCECS-SEEEEEE-HHHHHHHHHHCTTTTTBTTB.SSS...TTT..HCCCS-CT-EEEEEEEEE...........TCT CS
  His_Phos_2 298 lndlqrtree..........atperhvrlrlyfthdshiysllnaLglpeelagedslaa..ldrlsaspelpymsqivfelyed...........sse 373
                 +n++ + + +          +t++ +++l+++f+hd++i+s+l+a+g+ +  + +  ++    ++l+ s+  p+++++ +e+ +            +s 
  KHJ34994.1 368 QNHTLDYSHSqinvtldnntHTFPLNQTLYFDFSHDTNIMSILTAFGFKQFNEILPTDHHpgPHNLTVSHLEPFGARLDIEVIKSpypltaqrkydKSG 466
                 ****9999889***********************************8877777776666678********************99544444444443333 PP

                 TT.EEEEEE CS
  His_Phos_2 374 kk.fyvrll 381
                 k+ +y +++
  KHJ34994.1 467 KEtTYLHFI 475
                 334665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (540 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      407  (0.0227007); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 3973.20
//
Query:       KHJ34995.1  [L=1244]
Description: putative two-component histidine kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-40  137.1  15.7      3e-08   33.9   0.0    7.5  6  HAMP            HAMP domain
    3.9e-31  107.8   0.1    1.5e-30  106.0   0.1    2.1  1  HATPase_c       Histidine kinase-, DNA gyrase B-, and HSP90-l
      4e-26   91.4   0.6    1.6e-25   89.4   0.6    2.2  1  Response_reg    Response regulator receiver domain
    2.8e-17   62.5   0.6    2.8e-17   62.5   0.6    4.2  4  HisKA           His Kinase A (phospho-acceptor) domain
    0.00022   21.4   0.0        6.2    7.1   0.0    5.3  5  DUF4279         Domain of unknown function (DUF4279)
     0.0021   18.4  21.4          2    8.8   0.2    7.3  5  Syntaxin_2      Syntaxin-like protein
     0.0024   18.1  45.8        5.5    7.3   1.6    9.2  6  DUF948          Bacterial protein of unknown function (DUF948
     0.0097   16.1  35.0      0.063   13.5   1.5    7.0  7  Fib_alpha       Fibrinogen alpha/beta chain family
  ------ inclusion threshold ------
      0.055   12.7   6.8        6.9    5.8   0.0    4.0  4  GLE1            GLE1-like protein
       0.15   12.4   0.1         12    6.3   0.0    3.7  4  IL32            Interleukin 32
       0.49   10.3   4.2        8.1    6.4   0.0    4.0  5  DUF1759         Protein of unknown function (DUF1759)
       0.55   10.2   8.9       0.59   10.1   0.1    4.3  4  GhoS            Endoribonuclease GhoS
        1.8    8.0  20.0        2.6    7.5   0.8    5.2  6  DUF3829         Protein of unknown function (DUF3829)
        2.5    8.2  17.6        0.3   11.2   8.7    3.6  3  Mod_r           Modifier of rudimentary (Mod(r)) protein
        4.9    8.2  12.0         18    6.4   0.3    5.1  5  Rotamase        PPIC-type PPIASE domain


Domain annotation for each model (and alignments):
>> HAMP  HAMP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.1     0.024        29      10      52 ..     196     241 ..     192     242 .. 0.75
   2 !   33.4   0.4   3.7e-11   4.4e-08       2      52 ..     283     333 ..     282     334 .. 0.95
   3 !   26.6   0.0   4.7e-09   5.6e-06       2      53 .]     375     426 ..     374     426 .. 0.97
   4 !   33.9   0.0   2.5e-11     3e-08       2      51 ..     467     516 ..     466     518 .. 0.95
   5 !   27.8   0.1     2e-09   2.4e-06       2      52 ..     559     609 ..     558     610 .. 0.95
   6 !   15.2   0.1   1.7e-05      0.02       4      52 ..     653     701 ..     649     702 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.024
                 HHHHHHHHHHHTTTBTSST..CCT.TSSSHHHHHHHHHHHHHHHHH CS
        HAMP  10 LrrLaraarriaaGdldtr..lpv.sgrDEiGeLarafNaMldrLr 52 
                 Lr++ + + ++a+Gdl++   +   + + Ei +  r +N+M+d+L+
  KHJ34995.1 196 LREIGEIITAVARGDLSKKvqIHSvEMDPEITTFKRVINTMMDQLQ 241
                 89999999***********554444566777777777777777765 PP

  == domain 2  score: 33.4 bits;  conditional E-value: 3.7e-11
                 HHHTTHHHHHHHHHHHHHHTTTBTSSTCCTTSSSHHHHHHHHHHHHHHHHH CS
        HAMP   2 larrilrPLrrLaraarriaaGdldtrlpvsgrDEiGeLarafNaMldrLr 52 
                 +a +++  +r++a+++ ++a+Gdl++ ++   + Ei +L +++N+M+d+Lr
  KHJ34995.1 283 MAQNLTDQVREIASVTTAVAHGDLTQKIERPAQGEILQLQQTINTMVDQLR 333
                 67889999******************************************8 PP

  == domain 3  score: 26.6 bits;  conditional E-value: 4.7e-09
                 HHHTTHHHHHHHHHHHHHHTTTBTSSTCCTTSSSHHHHHHHHHHHHHHHHHH CS
        HAMP   2 larrilrPLrrLaraarriaaGdldtrlpvsgrDEiGeLarafNaMldrLre 53 
                 +a++++  +r +a+++ ++a+Gdl++ +  + + Ei +L +++N M+d+L++
  KHJ34995.1 375 MANNLTTQVRDIATVTTAVAKGDLTQKVKAECKGEIMQLKETINSMVDQLQQ 426
                 78999*********************************************97 PP

  == domain 4  score: 33.9 bits;  conditional E-value: 2.5e-11
                 HHHTTHHHHHHHHHHHHHHTTTBTSSTCCTTSSSHHHHHHHHHHHHHHHH CS
        HAMP   2 larrilrPLrrLaraarriaaGdldtrlpvsgrDEiGeLarafNaMldrL 51 
                 +a +++  +r++a+++ ++a+Gdl++ + v+ + Ei+ L  ++N+M+drL
  KHJ34995.1 467 MAMNLTTQVREIAKVTTAVAKGDLTKKIGVEVQGEIASLKDTINTMVDRL 516
                 57889999*****************************************9 PP

  == domain 5  score: 27.8 bits;  conditional E-value: 2e-09
                 HHHTTHHHHHHHHHHHHHHTTTBTSSTCCTTSSSHHHHHHHHHHHHHHHHH CS
        HAMP   2 larrilrPLrrLaraarriaaGdldtrlpvsgrDEiGeLarafNaMldrLr 52 
                 +a +++  +r +++++++ia+Gd ++ ++v+   Ei  L +++N+M+drL 
  KHJ34995.1 559 MASNLTSQVRGISTVTQAIANGDMSQKIEVEAAGEILVLKETINNMVDRLS 609
                 57889999*****************************************95 PP

  == domain 6  score: 15.2 bits;  conditional E-value: 1.7e-05
                 HTTHHHHHHHHHHHHHHTTTBTSSTCCTTSSSHHHHHHHHHHHHHHHHH CS
        HAMP   4 rrilrPLrrLaraarriaaGdldtrlpvsgrDEiGeLarafNaMldrLr 52 
                  ++++ +r   + +++  +Gd+++ ++v+   E++eL r +N+M+  Lr
  KHJ34995.1 653 QNLTAQVRAFGDITNAATDGDFTKLITVEASGEMDELKRKINQMVFTLR 701
                 5666667777777788889*************************98887 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.0   0.1   1.3e-33   1.5e-30       1     107 [.     832     946 ..     832     951 .. 0.91

  Alignments for each domain:
  == domain 1  score: 106.0 bits;  conditional E-value: 1.3e-33
                 EHHHHHHHHHHHHHHHHHHHHSTTTEEEEEEEE..EE......TEEEEEEEESSSSSTTHHHTGTCSTTCH.HCSTCHTSTSSSHHHHHHHHHHHHTTT CS
   HATPase_c   1 gdekrLrqiisnlvdNavkfatkageieveika..se......ddlvisveDnGiGipkedlkklfekfsq.ddstkrggggtGlGlsivkklvelmgG 90 
                 gd+ rLrq+i nlv+Na+kf t+ ge++++i+   ++        +++sv+D+GiGi  ++l+++f+ f+q d+s +r+ ggtGlGlsi+k+lv+lmgG
  KHJ34995.1 832 GDPFRLRQVILNLVGNAIKF-TEHGEVSLTIHNaeQNrclpneYLIEFSVSDTGIGIQSDKLDLIFDTFQQaDGSMTRKFGGTGLGLSISKRLVNLMGG 929
                 6889****************.99*********8651155554578888************************99************************* PP

                 EEEEEEETTTEEEEEEE CS
   HATPase_c  91 eiwvesepgrGttftft 107
                 ++wves+ g+G+tf ft
  KHJ34995.1 930 DVWVESKYGKGSTFFFT 946
                 *************9986 PP

>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.4   0.6   1.4e-28   1.6e-25       1     111 [.    1100    1214 ..    1100    1215 .. 0.95

  Alignments for each domain:
  == domain 1  score: 89.4 bits;  conditional E-value: 1.4e-28
                    EEEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHESEEEEESSCSSSEHHHHHHHHHHCT.....TTSEEEEEESSTSHHHHHHHH CS
  Response_reg    1 vlivdDdplvrellrqlleeegyeevaeaedgkealellkeekvdlillDinmpgmdGlellkeireed.....pelpviiltahseeedaveal 90  
                    +l+++D+ ++++l  ++le+ +   v+++ +g+ea++ ++++++d+il+D++mp m G+e++ +ire +       +p+i+ltah+   d+++++
    KHJ34995.1 1100 ILLAEDNVVNQRLAVKILEKYHH-AVTVVGNGQEAVDAIHAKRYDVILMDVQMPVMGGFEATAKIREYErtqsnLRTPIIALTAHAMLGDREKCI 1193
                    89******************999.******************************************9996544444******************* PP

                    HCTESEEEESSG-HHHHHHHH CS
  Response_reg   91 kagaddflsKpfdpeeLlkal 111 
                    +a +d++lsKp+++++L++ +
    KHJ34995.1 1194 QAQMDEYLSKPLKQNHLIQTI 1214
                    *****************9976 PP

>> HisKA  His Kinase A (phospho-acceptor) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.8       1.4   1.7e+03      35      57 ..     147     169 ..     127     180 .. 0.74
   2 ?   -2.1   0.0       3.5   4.2e+03      46      60 ..     320     334 ..     280     337 .. 0.60
   3 !   62.5   0.6   2.4e-20   2.8e-17       2      66 ..     721     784 ..     720     785 .. 0.96
   4 ?   -0.0   0.0      0.79   9.4e+02      13      41 ..    1173    1201 ..    1172    1223 .. 0.61

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 1.4
                 SSCHHHHHHHHHHHHHHHHHHHH CS
       HisKA  35 eelkeyletiesearrldhlved 57 
                  +++e  ++++++a++ +hl++ 
  KHJ34995.1 147 LRQEEIEAQVIQQAEHQQHLINH 169
                 5788888999***********96 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 3.5
                 HHHHHHHHHHHHHHH CS
       HisKA  46 searrldhlvedlLd 60 
                 +  + ++ +v++l++
  KHJ34995.1 320 QLQQTINTMVDQLRT 334
                 222355555555555 PP

  == domain 3  score: 62.5 bits;  conditional E-value: 2.4e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHC..T-HSSCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH CS
       HisKA   2 lgrflagvaHELrtPLsailgnaeaLkregklteelkeyletiesearrldhlvedlLdlsriea 66 
                 +++fla+++HE+rtP+++i+g++++  ++ +lt+ ++e+l+++++ a+ l+ +++d+Ldls+iea
  KHJ34995.1 721 KSEFLANMSHEIRTPMNGIIGMTQLTLDT-DLTQYQREMLNIVHNLANSLLTIIDDILDLSKIEA 784
                 89***********************8885.8********************************98 PP

  == domain 4  score: -0.0 bits;  conditional E-value: 0.79
                  HHHHHHHHHHHHHHHHC..........T-HSSCHHHH CS
       HisKA   13 LrtPLsailgnaeaLkre........gklteelkeyl 41  
                  LrtP+ a+ + a +  re        +        yl
  KHJ34995.1 1173 LRTPIIALTAHAMLGDREkciqaqmdE--------YL 1201
                  899998888888887665554333331........33 PP

>> DUF4279  Domain of unknown function (DUF4279)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.0      0.34   4.1e+02      51      83 ..     228     260 ..     214     284 .. 0.87
   2 ?    1.7   0.0      0.25   2.9e+02      51      83 ..     320     352 ..     311     378 .. 0.89
   3 !    7.1   0.0    0.0052       6.2      49      83 ..     410     444 ..     399     475 .. 0.81
   4 ?    2.1   0.0      0.18   2.2e+02      50      84 ..     503     537 ..     494     567 .. 0.80
   5 ?    0.5   0.0      0.58   6.9e+02      52      79 ..     597     624 ..     585     634 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.34
     DUF4279  51 dleeqldklldrlepkaekikelakkygleiyl 83 
                 +++ +++++ d+l+ +++++ ++a++ g e  l
  KHJ34995.1 228 TFKRVINTMMDQLQIFSSEVSRVAREVGTEGIL 260
                 78999*******************998877655 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.25
     DUF4279  51 dleeqldklldrlepkaekikelakkygleiyl 83 
                 +l+  +++++d+l  +a+++ ++a++ g e  l
  KHJ34995.1 320 QLQQTINTMVDQLRTFAAEVTRVARDVGTEGIL 352
                 67889*******************998877655 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0052
     DUF4279  49 sldleeqldklldrlepkaekikelakkygleiyl 83 
                  ++l+e +++++d+l+++a ++ ++a++ g e  l
  KHJ34995.1 410 IMQLKETINSMVDQLQQFAREVTKIAREVGTEGKL 444
                 6899***********************88877666 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.18
     DUF4279  50 ldleeqldklldrlepkaekikelakkygleiylq 84 
                  +l++ +++++drl  +a ++ ++a++ g + +l+
  KHJ34995.1 503 ASLKDTINTMVDRLGTFAFEVSKVAREVGTDGTLG 537
                 5899**********************998887776 PP

  == domain 5  score: 0.5 bits;  conditional E-value: 0.58
     DUF4279  52 leeqldklldrlepkaekikelakkygl 79 
                 l+e ++ ++drl+ ++++++++ak+ g+
  KHJ34995.1 597 LKETINNMVDRLSIFSNEVQRVAKDVGV 624
                 7899******************998766 PP

>> Syntaxin_2  Syntaxin-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.1     0.017        20       3      70 ..     238     310 ..     236     336 .. 0.82
   2 ?    2.3   0.1      0.18   2.2e+02       5      72 ..     332     404 ..     317     418 .. 0.66
   3 !    8.8   0.2    0.0017         2      16      16 ..     510     510 ..     420     620 .. 0.58
   4 ?    3.7   0.0     0.067        81      22      67 ..     628     679 ..     598     721 .. 0.75
   5 ?   -2.5   0.1       5.5   6.6e+03      21      61 ..     744     784 ..     742     814 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.017
  Syntaxin_2   3 snlqkinsnvstleklvkq...Lgtkkdteelreklhelieeinelikktnellkklsqldnsssds..qqkl 70 
                 ++lq ++s vs   + v +   Lg + +   ++   +el++++n ++++ +++++++++++        +qk+
  KHJ34995.1 238 DQLQIFSSEVSRVAREVGTegiLGGQAQISGVDGTWKELTDNVNIMAQNLTDQVREIASVTTAVAHGdlTQKI 310
                 699999***********99999************************************999877443444443 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.18
  Syntaxin_2   5 lqkinsnvstleklvkq...Lgtkkdteelreklhelieeinelikktnellkklsqldnsssds..qqklqk 72 
                 l +++  v+   + v +   Lg + + e ++   ++l+ ++n ++++ + +++++++++    +   +qk+++
  KHJ34995.1 332 LRTFAAEVTRVARDVGTegiLGGQAEIEGVKGMWNTLTVNVNAMANNLTTQVRDIATVTTAVAKGdlTQKVKA 404
                 3333333333333333334444445566666777999999999999999999999999888765555555544 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0017
  Syntaxin_2  16 e 16 
                 +
  KHJ34995.1 510 N 510
                 2 PP

  == domain 4  score: 3.7 bits;  conditional E-value: 0.067
  Syntaxin_2  22 Lgtkkdteelreklhelieeinelikktnellkklsqldnsssds......q 67 
                  g + d   +  + +e+++++n+++++ +++++ +  ++n   d       +
  KHJ34995.1 628 MGGQADVAGIGGRWKEITTDVNTMAQNLTAQVRAFGDITNAATDGdftkliT 679
                 5555677777778899999999999999999999999999987766644440 PP

  == domain 5  score: -2.5 bits;  conditional E-value: 5.5
  Syntaxin_2  21 qLgtkkdteelreklhelieeinelikktnellkklsqldn 61 
                 qL  ++d +++++++ ++++++ + + ++ +++ +ls+++ 
  KHJ34995.1 744 QLTLDTDLTQYQREMLNIVHNLANSLLTIIDDILDLSKIEA 784
                 56666788888888888888888888888888888888765 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   1.6    0.0046       5.5      40      79 ..     264     303 ..     221     312 .. 0.77
   2 !    6.6   5.7    0.0079       9.4      28      79 ..     329     395 ..     306     404 .. 0.80
   3 ?   -1.0  14.1       1.9   2.2e+03      39      79 ..     531     579 ..     398     587 .. 0.79
   4 ?    4.3   0.2      0.04        48      39      78 ..     623     670 ..     590     672 .. 0.64
   5 ?   -3.3   0.0       9.6   1.2e+04      48      60 ..     685     697 ..     679     713 .. 0.54
   6 ?   -2.2   0.0       4.3   5.1e+03      62      81 ..     884     903 ..     872     907 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0046
      DUF948  40 kqvdpilkevedllakvnelledvneklekvdplteavad 79 
                  q+ ++    ++l+++vn +++++++++ ++ ++t+ava+
  KHJ34995.1 264 AQISGVDGTWKELTDNVNIMAQNLTDQVREIASVTTAVAH 303
                 6777777778899999999******************984 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0079
      DUF948  28 ldeaaatieele...............kqvdpilkevedllakvnelledvneklekvdplteavad 79 
                 +d+++++ +e++                +++++    ++l+ +vn+++++++ ++ ++ ++t+ava+
  KHJ34995.1 329 VDQLRTFAAEVTrvardvgtegilggqAEIEGVKGMWNTLTVNVNAMANNLTTQVRDIATVTTAVAK 395
                 44444444444444555559999999999************************************85 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 1.9
      DUF948  39 e........kqvdpilkevedllakvnelledvneklekvdplteavad 79 
                 +         qvd++  + +dl+++vn++++++++++  + ++t+a+a+
  KHJ34995.1 531 GtdgtlggqAQVDNVEGKWKDLTENVNTMASNLTSQVRGISTVTQAIAN 579
                 3444555557888888888899999999999999999999999998875 PP

  == domain 4  score: 4.3 bits;  conditional E-value: 0.04
      DUF948  39 e........kqvdpilkevedllakvnelledvneklekvdplteava 78 
                 +         +v +i    +++++ vn+++++++ ++ +   +t+a+ 
  KHJ34995.1 623 GvdgkmggqADVAGIGGRWKEITTDVNTMAQNLTAQVRAFGDITNAAT 670
                 355555555677777777788888888888888888888888887775 PP

  == domain 5  score: -3.3 bits;  conditional E-value: 9.6
      DUF948  48 evedllakvnell 60 
                 e+++l +k+n+++
  KHJ34995.1 685 EMDELKRKINQMV 697
                 4444444444433 PP

  == domain 6  score: -2.2 bits;  conditional E-value: 4.3
      DUF948  62 dvneklekvdplteavadlg 81 
                 ++  +++k+d +++ ++++ 
  KHJ34995.1 884 GIGIQSDKLDLIFDTFQQAD 903
                 677799*********99875 PP

>> Fib_alpha  Fibrinogen alpha/beta chain family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.7       1.6   1.9e+03      83     106 ..     123     144 ..      88     169 .. 0.58
   2 !   13.5   1.5   5.3e-05     0.063      34     115 ..     172     251 ..     162     255 .. 0.88
   3 ?    2.7   0.1      0.11   1.3e+02      53     107 ..     283     335 ..     268     346 .. 0.65
   4 !   11.6   0.3   0.00019      0.23      49     114 ..     371     434 ..     358     440 .. 0.87
   5 ?    3.1   0.0     0.085     1e+02      48     104 ..     462     516 ..     447     530 .. 0.80
   6 ?    3.8   0.3     0.049        59      38     114 ..     543     618 ..     538     623 .. 0.72
   7 ?    1.7   1.2      0.23   2.8e+02      24     105 ..     684     766 ..     679     785 .. 0.71

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.6
                 HHHHHHCCCHHHHHHHCCHHHHHH CS
   Fib_alpha  83 skeleeeilrlketidaqesnirv 106
                 s+  +e i++l+++i +q ++i+v
  KHJ34995.1 123 ST--DELIETLQKEIADQAEQIKV 144
                 33..33466777777777777665 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 5.3e-05
                 CHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHH CS
   Fib_alpha  34 kkdlekleneleeisnstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesne 115
                  k++++le+el+++++ ++  ++  +ei +++++  + +   ++ ++  s e++ ei+++k+ i++ + +++   + +++  
  KHJ34995.1 172 AKRIASLERELKKHQQANEAFQKALREIGEIITAVARGDL--SKKVQIHSVEMDPEITTFKRVINTMMDQLQIFSSEVSRVA 251
                 589*****************************99988887..7888999999999****************99888777665 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHH CS
   Fib_alpha  53 eaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvL 107
                  a++l+ +++++   + + ++    +++k+++  + eil+l++ti++ + ++r  
  KHJ34995.1 283 MAQNLTDQVREIASVTTAVAH--GDLTQKIERPAQGEILQLQQTINTMVDQLRTF 335
                 344444444444444444444..68888888888888999999998888888865 PP

  == domain 4  score: 11.6 bits;  conditional E-value: 0.00019
                 CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHH CS
   Fib_alpha  49 nstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesn 114
                 n +  a++l+++++d+ + + + +k    +++k++ e++ ei++lketi++ + ++++    + + 
  KHJ34995.1 371 NVNAMANNLTTQVRDIATVTTAVAK--GDLTQKVKAECKGEIMQLKETINSMVDQLQQFAREVTKI 434
                 566789999*******999999999..69************************9999987766665 PP

  == domain 5  score: 3.1 bits;  conditional E-value: 0.085
                 CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHH CS
   Fib_alpha  48 snstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesni 104
                 +n +  a +l+++++++ + + + +k    ++kk+  e++ ei+ lk+ti++ + ++
  KHJ34995.1 462 ENVNGMAMNLTTQVREIAKVTTAVAK--GDLTKKIGVEVQGEIASLKDTINTMVDRL 516
                 45555677899999999998888888..699*******************9988766 PP

  == domain 6  score: 3.8 bits;  conditional E-value: 0.049
                 CCCCCCCCCC.CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHH CS
   Fib_alpha  38 ekleneleei.snstkeaeelvkeikdslrekqkskkdndnvikksskeleeeilrlketidaqesnirvLqnvlesn 114
                 +++e + +++ +n ++ a++l+++++ + + +q+ ++    + +k++ e   eil lketi++ + ++    n +++ 
  KHJ34995.1 543 DNVEGKWKDLtENVNTMASNLTSQVRGISTVTQAIAN--GDMSQKIEVEAAGEILVLKETINNMVDRLSIFSNEVQRV 618
                 4555555554144556677788888888777777776..68889999999999*********9999999888877765 PP

  == domain 7  score: 1.7 bits;  conditional E-value: 0.23
                 HCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHCCCHHHHHHHCCHHHHH CS
   Fib_alpha  24 dlllkyekdvkkdlekleneleeisnstkeaeelvkeikdslrekqkskkdn..dnvikksskeleeeilrlketidaqesnir 105
                 + +++ ++++++ + +l++++++++   + ae   ++ ++ l++  ++ + +  + +i   + +l+++ +++++++ + ++n+ 
  KHJ34995.1 684 GEMDELKRKINQMVFTLRDSIQRNTAAREAAEFANRTKSEFLANMSHEIR-TpmNGIIGMTQLTLDTDLTQYQREMLNIVHNLA 766
                 67899999999999999999998887665555554444455554444443.335889999999999999999999988886653 PP

>> GLE1  GLE1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   0.0    0.0058       6.9      17      98 ..     219     302 ..     205     310 .. 0.80
   2 ?    2.8   0.1     0.047        57      20      98 ..     314     394 ..     305     396 .. 0.76
   3 ?    5.5   0.3    0.0071       8.5       9      53 ..     397     439 ..     391     490 .. 0.80
   4 ?   -3.7   0.1       4.7   5.7e+03      22      52 ..     547     577 ..     535     586 .. 0.66

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0058
        GLE1  17 dkelkkllgdlkrkInpkvgQltnsseqlkkitkel..kellesgkpvkvadkpelaykyllnflAkalvsqaetevsakpeaA 98 
                 + e+   +++ kr In+ + Ql+  s++++++++e+  + +l  + +++ +d   + ++  +n++A++l +q+ + +s++++ A
  KHJ34995.1 219 SVEMDPEITTFKRVINTMMDQLQIFSSEVSRVAREVgtEGILGGQAQISGVDGTWKELTDNVNIMAQNLTDQVREIASVTTAVA 302
                 55667778899************************944568977777777777433468899************9999977666 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.047
        GLE1  20 lkkllgdlkrkInpkvgQltnsseqlkkitkel..kellesgkpvkvadkpelaykyllnflAkalvsqaetevsakpeaA 98 
                 ++  + +l++ In+ v Ql++ +++++++++++  + +l  + +++ +      ++  +n +A++l  q+   ++++++ A
  KHJ34995.1 314 AQGEILQLQQTINTMVDQLRTFAAEVTRVARDVgtEGILGGQAEIEGVKGMWNTLTVNVNAMANNLTTQVRDIATVTTAVA 394
                 56677899**********************998434677555555444444455789999999999999988888877666 PP

  == domain 3  score: 5.5 bits;  conditional E-value: 0.0071
        GLE1   9 nlleqvkedkelkkllgdlkrkInpkvgQltnsseqlkkitkelk 53 
                 +l ++v   +e k  +++lk  In  v Ql++ + +++ki++e+ 
  KHJ34995.1 397 DLTQKV--KAECKGEIMQLKETINSMVDQLQQFAREVTKIAREVG 439
                 555544..689*****************************99975 PP

  == domain 4  score: -3.7 bits;  conditional E-value: 4.7
        GLE1  22 kllgdlkrkInpkvgQltnsseqlkkitkel 52 
                  +++dl+ ++n+  + lt++   ++++t+++
  KHJ34995.1 547 GKWKDLTENVNTMASNLTSQVRGISTVTQAI 577
                 4566666666666666666666666665555 PP

>> IL32  Interleukin 32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0    0.0099        12      29      97 ..     221     288 ..     186     292 .. 0.83
   2 ?   -1.5   0.0       2.7   3.2e+03      58      68 ..     327     337 ..     303     384 .. 0.50
   3 ?    1.0   0.0      0.46   5.5e+02      46      96 ..     418     471 ..     399     476 .. 0.74
   4 ?   -2.3   0.0       4.9   5.9e+03      72      98 ..     539     565 ..     512     568 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0099
        IL32  29 evqepeesiwdkvlrrfqallrsLqqklrdvlaWlkekaaacleAlvsavkavwkvledFcsslaqllr 97 
                 e  +pe + +++v+ ++   l+    ++ +v   +    + + +A +s v+  wk+l+d    +aq l 
  KHJ34995.1 221 E-MDPEITTFKRVINTMMDQLQIFSSEVSRVAREVGTEGILGGQAQISGVDGTWKELTDNVNIMAQNLT 288
                 3.47888889999988888888888888888888888888999**********************9886 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 2.7
        IL32  58 dvlaWlkekaa 68 
                 +++  l+  aa
  KHJ34995.1 327 TMVDQLRTFAA 337
                 33333333332 PP

  == domain 3  score: 1.0 bits;  conditional E-value: 0.46
        IL32  46 qallrsLqqklrdvlaWlkekaaa...cleAlvsavkavwkvledFcsslaqll 96 
                  +++ +Lqq  r+v    +e+ +    + +A v++v+  w+ l++    +a  l
  KHJ34995.1 418 NSMVDQLQQFAREVTKIAREVGTEgklGGQATVHDVEGTWRDLTENVNGMAMNL 471
                 678888888888888777776654111569999999999999998877776655 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 4.9
        IL32  72 eAlvsavkavwkvledFcsslaqllrs 98 
                 +A v++v+  wk l++   ++a  l s
  KHJ34995.1 539 QAQVDNVEGKWKDLTENVNTMASNLTS 565
                 788999999999999999988887766 PP

>> DUF1759  Protein of unknown function (DUF1759)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1       9.4   1.1e+04      77      90 ..     178     191 ..     147     209 .. 0.46
   2 ?    1.8   0.0      0.17   2.1e+02      70     110 ..     307     347 ..     287     357 .. 0.87
   3 ?    6.4   0.0    0.0068       8.1      67     114 ..     396     443 ..     378     451 .. 0.87
   4 ?   -3.6   0.0       7.9   9.5e+03      72     106 ..     493     527 ..     481     534 .. 0.60
   5 ?   -0.2   0.0       0.7   8.4e+02      66     115 ..     579     628 ..     562     635 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 9.4
     DUF1759  77 llnelmklpslkee 90 
                 l  el k ++ +e 
  KHJ34995.1 178 LERELKKHQQANEA 191
                 22222222222222 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.17
     DUF1759  70 krkiirellnelmklpslkeedasqlrrivdavneivrale 110
                 ++ki r    e+ +l+++ +  ++qlr++  +v ++ r + 
  KHJ34995.1 307 TQKIERPAQGEILQLQQTINTMVDQLRTFAAEVTRVARDVG 347
                 6788888889999********************99999765 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0068
     DUF1759  67 Ydnkrkiirellnelmklpslkeedasqlrrivdavneivralealge 114
                  d ++k+++e   e+m+l+++ ++ ++ql+++  +v +i r + + g+
  KHJ34995.1 396 GDLTQKVKAECKGEIMQLKETINSMVDQLQQFAREVTKIAREVGTEGK 443
                 57789999********************************99877665 PP

  == domain 4  score: -3.6 bits;  conditional E-value: 7.9
     DUF1759  72 kiirellnelmklpslkeedasqlrrivdavneiv 106
                 ki  e   e+ +l+++ +  ++ l ++  +v ++ 
  KHJ34995.1 493 KIGVEVQGEIASLKDTINTMVDRLGTFAFEVSKVA 527
                 55555555555555555555555555555555554 PP

  == domain 5  score: -0.2 bits;  conditional E-value: 0.7
     DUF1759  66 rYdnkrkiirellnelmklpslkeedasqlrrivdavneivralealgee 115
                 + d ++ki  e   e+  l+++ ++ ++ l  ++++v+++ + +   g++
  KHJ34995.1 579 NGDMSQKIEVEAAGEILVLKETINNMVDRLSIFSNEVQRVAKDVGVDGKM 628
                 55788999999999************************999887666655 PP

>> GhoS  Endoribonuclease GhoS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.1         5     6e+03      65      85 ..     124     144 ..     119     149 .. 0.77
   2 ?   -0.8   0.1       1.3   1.5e+03      40      78 ..     267     304 ..     244     311 .. 0.71
   3 ?   10.1   0.1   0.00049      0.59      35      86 ..     446     499 ..     423     504 .. 0.86
   4 ?    2.3   0.1      0.13   1.6e+02      38      85 ..     541     590 ..     534     593 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 5
                 HHHHHHHGGGTSS----EEEE CS
        GhoS  65 ieelaaglaesalgkkpevev 85 
                   el++ l +++ ++  +++v
  KHJ34995.1 124 TDELIETLQKEIADQAEQIKV 144
                 467888999999999999887 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.3
                 E-SSS-EEE-TTSEEEE---S-HHHHHHHHHHGGGTSS- CS
        GhoS  40 aDeeGkpheLgtntfglisalseeeieelaaglaesalg 78 
                 +  +G+ +eL  n   +++    ++++e a+  + +a g
  KHJ34995.1 267 SGVDGTWKELTDNV-NIMAQNLTDQVREIASVTTAVAHG 304
                 55678888887665.455556667777777776666655 PP

  == domain 3  score: 10.1 bits;  conditional E-value: 0.00049
                 EESEEE-SSS-EEE-TTSEEEE---S-HH..HHHHHHHHGGGTSS----EEEEE CS
        GhoS  35 FsltlaDeeGkpheLgtntfglisalsee..eieelaaglaesalgkkpevevl 86 
                  + t+ D eG+ ++L +n  g+   l+ +  ei++ + + a+  l kk  vev+
  KHJ34995.1 446 GQATVHDVEGTWRDLTENVNGMAMNLTTQvrEIAKVTTAVAKGDLTKKIGVEVQ 499
                 5789***************99998887654489999999999999999999886 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.13
                 EEE-SSS-EEE-TTSEEEE---S-HHH..HHHHHHHGGGTSS----EEEE CS
        GhoS  38 tlaDeeGkpheLgtntfglisalseee..ieelaaglaesalgkkpevev 85 
                  +   eGk ++L +n   + s l+ +   i   +++ a+  + +k eve+
  KHJ34995.1 541 QVDNVEGKWKDLTENVNTMASNLTSQVrgISTVTQAIANGDMSQKIEVEA 590
                 57789****************99987444999999999999999999986 PP

>> DUF3829  Protein of unknown function (DUF3829)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   2.6      0.89   1.1e+03     148     223 ..     150     237 ..     123     263 .. 0.45
   2 ?    7.5   0.8    0.0022       2.6     214     278 ..     265     332 ..     176     334 .. 0.80
   3 ?    3.2   0.1     0.042        50     215     278 ..     361     424 ..     352     426 .. 0.88
   4 ?    7.2   0.1    0.0026       3.1     186     277 ..     408     515 ..     388     517 .. 0.74
   5 ?    2.9   0.1     0.052        62     215     277 ..     545     607 ..     532     609 .. 0.89
   6 ?   -3.2   0.2       3.7   4.4e+03     214     237 ..     671     704 ..     642     721 .. 0.50

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.89
     DUF3829 148 ekikkdermikyytlklmieakqlidlidrdkitakneldlaklkkklddlekaleklekaskeekr....................kkpalesfk 223
                 e+       i+ +++    + + li++   + i + +e +l+k +++ ++++kal+++ + +++ +r                     k ++++++
  KHJ34995.1 150 EE-------IEAQVIQQAEHQQHLINHYEAKRIAS-LERELKKHQQANEAFQKALREIGEIITAVARgdlskkvqihsvemdpeittFKRVINTMM 237
                 33.......33333333333333333333333322.222344444444444444444433333333333333334556663333333223333333 PP

  == domain 2  score: 7.5 bits;  conditional E-value: 0.0022
     DUF3829 214 r...kkpalesfkssakeflaaarkiirrirdkepysdsdkellksadsvegspeallrkynelidey 278
                 +    +  + +++++++ + +++++ +r+i++ +++  + +  +k+  +++g   +l++ +n ++d+ 
  KHJ34995.1 265 QisgVDGTWKELTDNVNIMAQNLTDQVREIASVTTAVAHGDLTQKIERPAQGEILQLQQTINTMVDQL 332
                 45556789************************99999998877779999****************986 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.042
     DUF3829 215 kkpalesfkssakeflaaarkiirrirdkepysdsdkellksadsvegspeallrkynelidey 278
                  k ++++++ +++++  ++++ +r+i++ +++  + +  +k +   +g  ++l + +n+++d+ 
  KHJ34995.1 361 VKGMWNTLTVNVNAMANNLTTQVRDIATVTTAVAKGDLTQKVKAECKGEIMQLKETINSMVDQL 424
                 567999**********************999999998777788889***************986 PP

  == domain 4  score: 7.2 bits;  conditional E-value: 0.0026
     DUF3829 186 ldlaklkkklddlekaleklekaskeekr................kkpalesfkssakeflaaarkiirrirdkepysdsdkellksadsvegspeall 268
                  ++ +lk+ ++ +  +l+++    ++ +r                 +  +++++++++++ +++++ +r+i++ +++  + +  +k++  v+g  + l 
  KHJ34995.1 408 GEIMQLKETINSMVDQLQQFAREVTKIARevgtegklggqatvhdVEGTWRDLTENVNGMAMNLTTQVREIAKVTTAVAKGDLTKKIGVEVQGEIASLK 506
                 555666666666666666666655555556666677788888888888999999999999999999999999988888777766668888999999999 PP

     DUF3829 269 rkynelide 277
                   +n ++d+
  KHJ34995.1 507 DTINTMVDR 515
                 999999986 PP

  == domain 5  score: 2.9 bits;  conditional E-value: 0.052
     DUF3829 215 kkpalesfkssakeflaaarkiirrirdkepysdsdkellksadsvegspeallrkynelide 277
                  + ++ +++++++++ +++++ +r i + + +  + ++ +k+   ++g    l + +n+++d+
  KHJ34995.1 545 VEGKWKDLTENVNTMASNLTSQVRGISTVTQAIANGDMSQKIEVEAAGEILVLKETINNMVDR 607
                 67899*************************9999999999999999***************97 PP

  == domain 6  score: -3.2 bits;  conditional E-value: 3.7
     DUF3829 214 r..........kkpalesfkssakeflaaarkii 237
                 +           + +++++k+++++++ ++r+ i
  KHJ34995.1 671 DgdftklitveASGEMDELKRKINQMVFTLRDSI 704
                 2223333333334444555555555555555555 PP

>> Mod_r  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   8.7   0.00025       0.3       2     106 ..     121     221 ..     118     228 .. 0.85
   2 ?    0.2   0.2      0.62   7.4e+02      47      80 ..     400     434 ..     366     441 .. 0.59
   3 ?   -1.3   0.1       1.7   2.1e+03      18     119 ..     693     725 ..     681     772 .. 0.59

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00025
       Mod_r   2 klSkeeLqelledeeklealvktlpevkqlkeekeellaeneslaeknlslepeleelr.selqekleelkelekefeekeqeldellqkfspdallar 99 
                 klS++eL e l++     +++++++++k  k ++ee++a+ ++ ae++  l +++e +r ++l+ +l++ ++++++f++  +e  e++  +    l ++
  KHJ34995.1 121 KLSTDELIETLQK-----EIADQAEQIKVGKLRQEEIEAQVIQQAEHQQHLINHYEAKRiASLERELKKHQQANEAFQKALREIGEIITAVARGDLSKK 214
                 6777777776664.....567788999************************999998885799999********************9999998888888 PP

       Mod_r 100 Lqtavae 106
                 +q    e
  KHJ34995.1 215 VQIHSVE 221
                 8866555 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.62
       Mod_r  47 eknlsl.epeleelrselqekleelkelekefeek 80 
                 +k  ++ + e+ +l++ +++  ++l++  +e+ + 
  KHJ34995.1 400 QKVKAEcKGEIMQLKETINSMVDQLQQFAREVTKI 434
                 33333335588888888888888888888777665 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 1.7
       Mod_r  18 lealvktl.pevkqlkeekeellaeneslaeknlslepeleelrselqekleelkelekefeekeqeldellqkfspdallarLqtavaeaeeeSeala 115
                 ++++v tl +++++ ++++e ++ +n+                                                                        
  KHJ34995.1 693 INQMVFTLrDSIQRNTAAREAAEFANR----------------------------------------------------------------------TK 721
                 444444444445555555554444444......................................................................44 PP

       Mod_r 116 eefl 119
                 +efl
  KHJ34995.1 722 SEFL 725
                 4444 PP

>> Rotamase  PPIC-type PPIASE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.1     0.073        87      15      69 ..     171     227 ..     158     240 .. 0.79
   2 ?   -1.9   0.0       5.5   6.6e+03      17      41 ..     320     344 ..     285     385 .. 0.63
   3 ?    6.4   0.3     0.015        18      11      58 ..     399     446 ..     386     492 .. 0.74
   4 ?    0.0   0.1       1.4   1.7e+03      17      76 ..     497     564 ..     481     587 .. 0.68
   5 ?    0.5   0.0       1.1   1.3e+03      22      75 ..     641     700 ..     630     709 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.073
                 HHHHHHHHHHHHCCTCCCHHHHHHHHCCC-.-CHHHCCTTEEEC...EETTTS-CCCH CS
    Rotamase  15 raeakakaeeileqlksgedtFeelArkySddknsakngGdlgw...vekgqlppefe 69 
                 +a+ +a +e+ l+++++ +++F+++ r+   +  +a  +Gdl +   + + +++pe++
  KHJ34995.1 171 EAKRIASLERELKKHQQANEAFQKALREIG-EIITAVARGDLSKkvqIHSVEMDPEIT 227
                 556678889999999999999*********.9999*******9443366669999854 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 5.5
                 HHHHHHHHHHCCTCCCHHHHHHHHC CS
    Rotamase  17 eakakaeeileqlksgedtFeelAr 41 
                 + ++ ++++ +ql++ +++  ++Ar
  KHJ34995.1 320 QLQQTINTMVDQLRTFAAEVTRVAR 344
                 3344444444444444444444444 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.015
                 ----HHHHHHHHHHHHCCTCCCHHHHHHHHCCC-.-CHHHCCTTEEEC CS
    Rotamase  11 sekeraeakakaeeileqlksgedtFeelArkySddknsakngGdlgw 58 
                 ++k +ae k ++++++e ++s  d++++ Ar++ +      ++G+lg 
  KHJ34995.1 399 TQKVKAECKGEIMQLKETINSMVDQLQQFAREVTKIAREVGTEGKLGG 446
                 67788999999*********************9988888888888882 PP

  == domain 4  score: 0.0 bits;  conditional E-value: 1.4
                 HHHHHHHHHHCCTCCCHHHHHHHHCCC-.-CHHHCCTTEEE.CEETT.........TS-CCCHHHHCCS- CS
    Rotamase  17 eakakaeeileqlksgedtFeelArkySddknsakngGdlg.wvekg.........qlppefekaafslk 76 
                 e++ ++ ++++ +++  d++ + A ++S+      ++G lg +   +         +l+++++++a++l+
  KHJ34995.1 497 EVQGEIASLKDTINTMVDRLGTFAFEVSKVAREVGTDGTLGgQ--AQvdnvegkwkDLTENVNTMASNLT 564
                 5666777777788888888888888888777777777777731..1122334445555555555555554 PP

  == domain 5  score: 0.5 bits;  conditional E-value: 1.1
                 HHHHHCCTCCCHHHHHHHHCCC-.-CHHHCCTTEEEC.......EETTTS-CCCHHHHCCS CS
    Rotamase  22 aeeileqlksgedtFeelArkySddknsakngGdlgw.......vekgqlppefekaafsl 75 
                  +ei  ++++ ++++ + +r +  d  +a+++Gd ++        e+++l+ ++++++f+l
  KHJ34995.1 641 WKEITTDVNTMAQNLTAQVRAFG-DITNAATDGDFTKlitveasGEMDELKRKINQMVFTL 700
                 57788888888888888888888.8888888888886433322233336777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1529  (0.0852808); expected 358.6 (0.02)
Passed bias filter:                      621  (0.0346366); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                        26  (0.00145016); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 1.06u 0.29s 00:00:01.35 Elapsed: 00:00:00.46
# Mc/sec: 8061.17
//
Query:       KHJ34996.1  [L=682]
Description: putative ste ste20 ysk protein kinase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-70  237.0   0.0    3.4e-70  236.4   0.0    1.3  1  Pkinase         Protein kinase domain
      4e-51  173.8   0.0    6.7e-51  173.0   0.0    1.3  1  Pkinase_Tyr     Protein tyrosine kinase
    0.00027   19.8   0.0     0.0005   19.0   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase
     0.0014   18.0   0.0      0.052   12.9   0.0    2.4  2  Kinase-like     Kinase-like
  ------ inclusion threshold ------
       0.11   11.4   0.0        5.6    5.8   0.0    2.4  2  Haspin_kinase   Haspin like kinase domain


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.4   0.0   9.5e-74   3.4e-70       2     264 .]      19     268 ..      18     268 .. 0.95

  Alignments for each domain:
  == domain 1  score: 236.4 bits;  conditional E-value: 9.5e-74
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHHH CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseeea 100
                 +k++ +G GsfGkVyk+++k+tg+ vA+K+i++e+a+++ e ++++Ei+il +l++p++ ++y+++ + ++l++++e++ gg+  dl++  g + ee +
  KHJ34996.1  19 TKQNCIGGGSFGKVYKGFDKRTGQAVAIKVIDVENAEDEVE-DIVQEIAILSELHSPYVTQYYGSYLKGSDLWIIMEFCAGGSCGDLMK-PGLIGEEYI 115
                 67889*******************************99885.9*********************************************7.699****** PP

                 HHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STT CS
     Pkinase 101 kkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfs 198
                 + i++++l gleylHs + +HrD+K +N+L++++g++K++DFG++ +l+ + + +++fvgt+ ++APEv+k+++y++k+D+WslG++ +el +g+pp+s
  KHJ34996.1 116 SIIMRELLLGLEYLHSDKKLHRDIKAANVLLSSNGQVKLADFGVSGQLSATMTkKNTFVGTPFWMAPEVIKQSGYDHKADMWSLGITALELANGEPPYS 214
                 *************************************************988779******************************************** PP

                 TSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 199 gekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                           +++ ++ ++ i  +++   + + ++s+ +k++++ +l+kdp+kR++a+ell+hp++
  KHJ34996.1 215 ----------DIHPMKVLFLI--PKNPPPELEGNFSKAFKEFIELCLQKDPRKRPSARELLKHPFV 268
                 ..........77776566666..456778888899*****************************96 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.0   0.0   1.9e-54   6.7e-51       3     257 ..      20     264 ..      18     265 .. 0.95

  Alignments for each domain:
  == domain 1  score: 173.0 bits;  conditional E-value: 1.9e-54
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekl 100
                   ++ +G G+fGkV++g  k    ++ + Va+K+++ e+ e+e e++++e++i+++l+ p + +++g ++k++ l+i++e+++gG+  + ++      +
   KHJ34996.1  20 KQNCIGGGSFGKVYKGFDK----RTGQAVAIKVIDVENAEDEVEDIVQEIAILSELHSPYVTQYYGSYLKGSDLWIIMEFCAGGSCGDLMKPG---LI 110
                  56789***********999....8999*************************************************************99886...77 PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEi 198
                    + +  ++ ++  G+eyL+s k +Hrd+ a NvLls+n +vk++DfG++ ++  + +++kk++      WmapE++k++ + +k+D+Ws G++  E+
   KHJ34996.1 111 GEEYISIIMRELLLGLEYLHSDKKLHRDIKAANVLLSSNGQVKLADFGVSGQL--SATMTKKNTFVGTPFWMAPEVIKQSGYDHKADMWSLGITALEL 206
                  77777778899******************************************..677778888888999**************************** PP

                  HTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 199 ftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  ++ ge py+++++++vl  + ++   e   + +++++e+++ c+++dp++Rp+ +el++
   KHJ34996.1 207 AN-GEPPYSDIHPMKVLFLIPKNPPPELEGNFSKAFKEFIELCLQKDPRKRPSARELLK 264
                  99.**************************************************999875 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.0   1.4e-07    0.0005     314     392 ..     121     193 ..     117     201 .. 0.83

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.4e-07
  Pkinase_fungal 314 DaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgee..Hs 392
                     + + g++ L+   + LHrDi + N+l+      ++ +  L+D+ +  +ls   +  ++++ +GT+ +ma ev+k++   H+
      KHJ34996.1 121 ELLLGLEYLH-SDKKLHRDIKAANVLLS-----SNGQVKLADFGVSGQLSA--TMTKKNTFVGTPFWMAPEVIKQSGydHK 193
                     5567889999.8888*************.....677889***********6..4444579**************7554465 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0     0.022        79      15      59 ..      19      61 ..      13      92 .. 0.76
   2 !   12.9   0.0   1.4e-05     0.052     158     252 ..     127     215 ..     116     221 .. 0.72

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.022
  Kinase-like 15 vrgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerl 59
                  +++ ++ g +++v++  d+ tg+ +a+kv  ++  +++ ++e +
   KHJ34996.1 19 TKQNCIGGGSFGKVYKGFDKRTGQAVAIKVIDVE--NAEDEVEDI 61
                 5789999**********************98765..455555555 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 1.4e-05
  Kinase-like 158 anLqakglvhgkftvdnllldekgglmlggft...aLvragtkvvlseve.kgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwclklPlt 251
                   +L++   +h ++++ n+ll  +g+++l +f+   +L    tk     v    +  pE++ +           + hk d W lG++++ ++  + P  
   KHJ34996.1 127 EYLHSDKKLHRDIKAANVLLSSNGQVKLADFGvsgQLSATMTKKN-TFVGtPFWMAPEVIKQ---------SGYDHKADMWSLGITALELANGEPPYS 214
                  589999999**********************82223443333333.2222122345566555.........56889***********99987777766 PP

  Kinase-like 252 l 252
                   
   KHJ34996.1 215 D 215
                  5 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.7   0.0     0.013        47      90     152 ..       5      73 ..       2      88 .. 0.71
   2 ?    5.8   0.0    0.0016       5.6     230     254 ..     136     160 ..     132     174 .. 0.89

  Alignments for each domain:
  == domain 1  score: 2.7 bits;  conditional E-value: 0.013
  Haspin_kinase  90 lckikkilneadlasllnd.seklssevyqtke..kdkevvlKvipl....evledvtiskelslkelks 152
                     c ++ ++++++l ++ n  + +++++vy+  +  + ++v++Kvi +    + +ed+   ++  l el+s
     KHJ34996.1   5 ECMMRGVVDPETLFTKQNCiGGGSFGKVYKGFDkrTGQAVAIKVIDVenaeDEVEDIVQ-EIAILSELHS 73 
                    67788888888888777767999*******977668899********644422333322.2444466665 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.0016
  Haspin_kinase 230 HRdLhldniLvdknlnvtlidlkls 254
                    HRd++  n+L+ +n++v l d+ +s
     KHJ34996.1 136 HRDIKAANVLLSSNGQVKLADFGVS 160
                    *********************9877 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (682 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       520  (0.0290033); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.28s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 4796.62
//
Query:       KHJ34997.1  [L=97]
Description: putative mitochondrial 54s ribosomal protein 44 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-19   67.6   0.3    1.1e-18   67.1   0.3    1.3  1  MRP_L53   39S ribosomal protein L53/MRP-L53


Domain annotation for each model (and alignments):
>> MRP_L53  39S ribosomal protein L53/MRP-L53
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.1   0.3   6.2e-23   1.1e-18       1      53 []      13      62 ..      13      62 .. 0.99

  Alignments for each domain:
  == domain 1  score: 67.1 bits;  conditional E-value: 6.2e-23
     MRP_L53  1 FnPFspnaksaRlFLsllskppaarnpgckiktkvlpdastseptvkVtFkDG 53
                FnPFs +ak+aRlFL++l  pp+ar + +ki+tk+lp++s +++++ ++FkDG
  KHJ34997.1 13 FNPFSVKAKPARLFLAFL--PPSARRS-MKIETKILPRESVEPSHLYLKFKDG 62
                9*****************..*****99.************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       187  (0.01043); expected 358.6 (0.02)
Passed bias filter:                      179  (0.00998383); expected 358.6 (0.02)
Passed Vit filter:                        10  (0.000557756); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 712.49
//
Query:       KHJ34998.1  [L=526]
Description: putative pre-mrna splicing factor clf1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.023   14.7   1.0       0.94    9.5   0.0    3.3  3  Kelch_5   Kelch motif
       0.12   13.2   0.0        0.3   12.0   0.0    1.7  1  EphA2_TM  Ephrin type-A receptor 2 transmembrane domain


Domain annotation for each model (and alignments):
>> Kelch_5  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.2     0.038   3.4e+02       5      19 ..      10      24 ..       8      26 .. 0.83
   2 ?   -0.8   0.0      0.19   1.7e+03      16      32 ..      68      82 ..      52      91 .. 0.73
   3 ?    9.5   0.0    0.0001      0.94       5      24 ..     107     128 ..     105     138 .. 0.82

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.038
     Kelch_5  5 RaghcavtvsekiYv 19
                + ++c+v++++ iY 
  KHJ34998.1 10 LDDSCTVVYNHTIYS 24
                6789*********95 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.19
     Kelch_5 16 kiYvyGGkvgrdgsvsd 32
                ++++ GG++  d++ + 
  KHJ34998.1 68 SMFIVGGVT--DMDTYH 82
                6999***99..777665 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.0001
     Kelch_5   5 Raghcavtvs..ekiYvyGGkv 24 
                 R +h av+++  ++i+vy+G++
  KHJ34998.1 107 RIYHGAVYLNasDSILVYSGIQ 128
                 899*****9555********98 PP

>> EphA2_TM  Ephrin type-A receptor 2 transmembrane domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   3.4e-05       0.3       4      38 ..     369     436 ..     367     460 .. 0.58

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 3.4e-05
    EphA2_TM   4 aavaglvllvilvilvlvlvrrrsknrkqksdl...............k..................s 38 
                 aa+++ +l+ +++i+ l+++ r++k ++q++++                                  s
  KHJ34998.1 369 AAIIVSILISAVLIISLLCFTRSQKAKAQNNKNndprfkggpdeedgmDfidkgvsdeilekyssssS 436
                 67788888888888899999888888887776666665555554444404444444444444444430 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (526 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       833  (0.046461); expected 358.6 (0.02)
Passed bias filter:                      608  (0.0339115); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 3871.16
//
Query:       KHJ34999.1  [L=422]
Description: putative dihydrouridine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.3e-45  153.0   0.0    5.1e-44  150.6   0.0    1.9  1  Dus       Dihydrouridine synthase (Dus)
  ------ inclusion threshold ------
      0.041   13.2   0.1       0.24   10.7   0.0    2.0  2  TMP-TENI  Thiamine monophosphate synthase


Domain annotation for each model (and alignments):
>> Dus  Dihydrouridine synthase (Dus)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.6   0.0   5.7e-48   5.1e-44      23     248 ..      56     310 ..      34     346 .. 0.76

  Alignments for each domain:
  == domain 1  score: 150.6 bits;  conditional E-value: 5.7e-48
                 S........................SEEEEEEEE-S...SS---HHHHHHH-GGGGGTSCEEEEEE-S-HHHHHHHHHHHHHTT-SCEEEEESSTTEEE CS
         Dus  23 t........................aLvvtemvtak...aivreekvrirmlseeeeetplavQlggsdpallaeaAklvadlgadeIdlNvGCPskkv 94 
                 +                        +  +t + +       v ++++ i +l  e+e++ l++Q+g+sdp  ++eaA++va  ++ +Id+N+GCP++++
  KHJ34999.1  56 DlvwgpetvdrsligttrrvnhhlqTVDFTRLPSNGskiPRVDQKESIIFRLHPEKESKRLIFQIGTSDPVRAVEAARIVAR-DVAGIDVNAGCPKPFS 153
                 54444444444444444444443332222333333311133556666677788888889**********************9.**************** PP

                 TTEEEGGGGGGSHHHHHHHHHHHHCCSSS-EEEEEESESS..TTTC.HHHHHHHHHHCT-SEEEEESS.ECCCTT-C..G--CHHHHHHHHH-SS-EEE CS
         Dus  95 trggaGaaLlrkpdlvaqivkavvkaveiPvtvkirigid..deeenalelakiveaaGaqaltvHgR.traqnyeg..tadweaIkevkqavsipvia 188
                 t+gg+GaaLl++p+ ++ i++a+vk +     + i+++i+  d+ e +l l++ ++++G++ ltvH+R t+++ +e   +++++ I +++++  +  i+
  KHJ34999.1 154 TSGGMGAALLQTPEKLCAILRALVKDITAEFEIGISVKIRllDTVESTLSLVNDLCETGITGLTVHCRtTPMRPRERaiRDQLKMITALCREKGVACIM 252
                 ***************************96666666666666699************************877887777789******************* PP

                 ESS--SHHHHHHHHHHH--SEEEESCHHCCSTTHHHHHHHHHHSC------HHHHHHHHH CS
         Dus 189 NGdIkdaedaqaileetGadgvmigrgalgnPwlfaestavktgeaepapplaeeaeive 248
                 NGdI+++++a++ ++e Gadg mi+ +a+ n   f+    ++ g a  +  +++++ei+ 
  KHJ34999.1 253 NGDIQNRQEAEKLIAEYGADGAMIASAAEANSSCFR--SDLEGGLAPWNEVVRQYLEICL 310
                 *******************************99998..3444444443333666666554 PP

>> TMP-TENI  Thiamine monophosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   2.6e-05      0.24      13      71 ..     199     261 ..     191     282 .. 0.76
   2 ?   -0.6   0.0     0.082   7.3e+02     102     144 ..     332     373 ..     330     394 .. 0.76

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 2.6e-05
    TMP-TENI  13 eellevveealkggvtlvqlRek....eldarellelaeklaalcrkygvpliindrvdlala 71 
                 e+ l++v+++++ g+t +++  +       +r+++++ + + alcr++gv+ i n +++  ++
  KHJ34999.1 199 ESTLSLVNDLCETGITGLTVHCRttpmRPRERAIRDQLKMITALCREKGVACIMNGDIQNRQE 261
                 55677888888888885555444335546788999*********************9986555 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.082
    TMP-TENI 102 SvhsleeaeeaealgadYigvGpifpTdtKkdaeplgleglke 144
                 Sv+++  a +  ++ ++Y+g+  + +  +K+  e lg++  ++
  KHJ34999.1 332 SVYREMTASKCYQQVCSYLGLTDF-EVRSKQVDESLGINMEER 373
                 777888889999999999999987.999999999998876555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (422 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       571  (0.0318478); expected 358.6 (0.02)
Passed bias filter:                      509  (0.0283898); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.26s 00:00:00.81 Elapsed: 00:00:00.43
# Mc/sec: 2915.37
//
Query:       KHJ35000.1  [L=533]
Description: putative ubx domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-18   67.0   0.4    1.1e-17   64.0   0.1    2.3  2  Thioredoxin_7  Thioredoxin-like
    1.2e-06   28.3   0.0    2.6e-06   27.1   0.0    1.6  1  UBA_4          UBA-like domain
    2.2e-06   27.7   0.0    5.2e-06   26.6   0.0    1.7  1  UBX            UBX domain
     0.0097   16.3   0.0      0.024   15.1   0.0    1.7  1  Thioredoxin_2  Thioredoxin-like domain


Domain annotation for each model (and alignments):
>> Thioredoxin_7  Thioredoxin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.21   9.2e+02      30      63 ..      60      93 ..      56     107 .. 0.78
   2 !   64.0   0.1   2.3e-21   1.1e-17       5      83 .]     229     314 ..     224     314 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.21
                   HHHHHHHHHHHH-HHHHH.HHHT-EEEEESS--S CS
  Thioredoxin_7 30 ftCqalerdflsdeevkaalaekfvllrvdvter 63
                     ++++  d+ ++++v +  ++++ ++++d+++ 
     KHJ35000.1 60 LNSTKNSSDLSQPQVVPKHKKNNVDFVNIDDDND 93
                   5678899999999999997779999*****9543 PP

  == domain 2  score: 64.0 bits;  conditional E-value: 2.3e-21
                    SHHHHHHHHHHHT--EEEEE--TT-HHHHHHHHHHHH-HHHHH.HHHT-EEEEESS--S-GGG....-TT-....--SSEEEEE-T CS
  Thioredoxin_7   5 dldealakaaergkpvlvffgaswcftCqalerdflsdeevkaalaekfvllrvdvterdani...lelde....qgvPvvafldp 83 
                    ++++a+++ + + k+++v+++++ +f+Cq l+rd ++d+ +k+a++e+f+++++  +   a++   + +++    + +P++a++dp
     KHJ35000.1 229 SWETAREQGKIERKWIIVNVQDQSIFDCQQLNRDIWKDPGIKEAIKENFIFVQYSNDDPRASQyiqFYFQNssinEAYPHIAIVDP 314
                    5899****************************************************777776666655555545455********9 PP

>> UBA_4  UBA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.0   5.9e-10   2.6e-06       2      41 ..      11      50 ..      10      51 .. 0.96

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 5.9e-10
       UBA_4  2 eliaqFqaiTGadeekArqlLeannWdLerAislyFdsge 41
                e+i+ F+++TG+ +e+A+++L  + +  e Ai+l++ds++
  KHJ35000.1 11 EAIEYFKSFTGQKDEVAQRYLGLTENVAEHAIQLFYDSPD 50
                89***********************************985 PP

>> UBX  UBX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   1.2e-09   5.2e-06       4      80 ..     453     527 ..     450     528 .. 0.90

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 1.2e-09
                 SSEEEEEEEETTSTEEEEEEESSSBHHHHHHHHHHHCCCCCTS..EEEEETTTTEEGGCCCCSBCCCCTTTSCEEEEEE CS
         UBX   4 edatrlqiRlpdGsrlvrrFkksdtlesvyeyVdsklfekeep..FqLltsfPrreltksdkktLsdlgllpnstlvle 80 
                  ++tr+q + + G r+vr F+ +d++  +ye+ +s+ +e+ +   F+L +++ ++++ ++d +++++  +l+n+t+++e
  KHJ35000.1 453 PETTRIQFKHA-GGRIVRVFNVNDPVLRIYEWLKSEPVEERSGveFEL-KTMGKDLINHLD-ESINEC-GLKNGTVMVE 527
                 57899999987.779*************************97777999.667899*****9.******.*******998 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   5.4e-06     0.024       4      60 ..     240     289 ..     237     350 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 5.4e-06
  Thioredoxin_2   4 ngkpvlvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekk 60 
                    + k ++v ++d +  +C++l++++++++++++      +k++  +++v+ + ++ ++
     KHJ35000.1 240 ERKWIIVNVQDQSIFDCQQLNRDIWKDPGIKEA-----IKEN--FIFVQYSNDDPRA 289
                    67999****************************.....9999..6666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (533 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       772  (0.0430587); expected 358.6 (0.02)
Passed bias filter:                      517  (0.028836); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3791.24
//
Query:       KHJ35001.1  [L=304]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       698  (0.0389313); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.45
# Mc/sec: 2037.21
//
Query:       KHJ35002.1  [L=247]
Description: putative hydantoin racemase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       531  (0.0296168); expected 358.6 (0.02)
Passed bias filter:                      496  (0.0276647); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 1924.09
//
Query:       KHJ35003.1  [L=389]
Description: putative actin-like protein 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.2e-111  371.8   0.0   2.2e-110  369.1   0.0    1.8  1  Actin     Actin
  ------ inclusion threshold ------
       0.04   12.7   0.0       0.19   10.5   0.0    2.1  1  MreB_Mbl  MreB/Mbl protein


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  369.1   0.0  2.4e-114  2.2e-110       7     404 ..       6     385 ..       3     387 .. 0.96

  Alignments for each domain:
  == domain 1  score: 369.1 bits;  conditional E-value: 2.4e-114
       Actin   7 vVlDnGssttraGyagedaPkavipslvgkprgrkvea........klyvgdealtkrpelevrspvedGvvedwdaveelwehvlkeelkvdpeehpl 97 
                 +VlD G++++++Gya  ++P+  +ps+vg+p  r++e+        ++ +gdea + r++l++++p+e+G+v+ wd++++lw+++++e+lkvd++  ++
  KHJ35003.1   6 IVLDGGTGFLKVGYAAQNFPEFQFPSIVGRPMLRTEEKgndgiilkDIMCGDEAAAARTMLQLSYPMENGIVKKWDDMQHLWDYTFYEKLKVDTTGRKI 104
                 9*****************************99998888999********************************************************** PP

       Actin  98 lltepplnppkqrekalEivfEkfkvpalylaksavlsafasgkstglvvDsGasvtsvvpVldGyvLkkairrsdlgGkaLteqlkellssknvevtp 196
                 lltepp+np k+re++++++fE +++ ++y+a +avl+++a+g+s+g+vvDsG++vt++vpV++ +vL++ +rr+d++G+++t++l +ll ++      
  KHJ35003.1 105 LLTEPPMNPLKNREQMCQVMFERYQFGGVYVAIQAVLALYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLTRRLDVAGRDVTRNLIALLLRR------ 197
                 ******************************************************************************************998...... PP

       Actin 197 rylikkkkvveaessaekeelekltesyktleeeevleeiKesvcevsedpegdeekss..sspeksYeLPDgseiklgeeRfkvpEiLFdpsligses 293
                                         +++++ +++ e++++iKe++c+vs+d e d++ s+  +   +sY+LPDg++i +g+eRf++pE+LF+p+l+  e+
  KHJ35003.1 198 ------------------------GYALNRTADFETVRQIKEKLCYVSYDLELDKRLSEdtTVLVESYTLPDGRVIRVGSERFEAPECLFQPHLVDVEQ 272
                 ........................9**************************996666655599999********************************* PP

       Actin 294 aleeekskllgiselivaainacdvdlrpeLlanivvtGGnsllpglteRlekelaql...........askgvkvkiiapeeerkysaWiGGSiLAsl 381
                           gi+e ++++i+a++vd+r++L++ iv++GG+s++pgl +Rleke++ql             +++kv+i  p+ +r++++++GG++L+++
  KHJ35003.1 273 P---------GIAEFLFNTIQAANVDVRSSLYKAIVLSGGSSMYPGLPSRLEKEIKQLwltkvlggnpeRLNKFKVRIEDPP-RRRHMVFLGGAVLSNI 361
                 9.........************************************************7777777777666777********.***************9 PP

       Actin 382 g.tfqqlwvskqEYeEqGssvver 404
                 + + +++w+skqE+eEqG+++ e+
  KHJ35003.1 362 MaDKENMWISKQEWEEQGPRILEK 385
                 956669**************9987 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   2.2e-05      0.19     145     298 ..     149     319 ..      56     324 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 2.2e-05
                 S-EEEEEE-SS-EEEEEEETTEEEE...EEEES-SHHHHHHHHHH.HHHHHHSEE..--HHHHHHHHHHH-BSS--HHHH.....EEEEEEEETTTTCE CS
    MreB_Mbl 145 sgnmvvdiGggttevavislggivt...sksvrvaGdeldeaiik.yirkkynll..iGertaekikieigsavkeeeee.....kmeikGrdlvtglp 232
                 s+ +vvd G g t ++ + + ++v    ++++ vaG ++  ++i  ++r+ y l      +t+++ik ++ ++  + e +      +++     +    
  KHJ35003.1 149 SSGVVVDSGDGVTHIVPV-YESVVLnhlTRRLDVAGRDVTRNLIAlLLRRGYALNrtADFETVRQIKEKLCYVSYDLELDkrlseDTTVLVESYTLPDG 246
                 56689********99766.44555412257899***999988766267999998621556899******999876654433233333333333333333 PP

                 EEEEEEHH..HHHHHHHHH.HHH.....HHHHHHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHHS CS
    MreB_Mbl 233 kevevsse..evrealkep.vsa.....iveavkevLektppeLaadivdrgivltGGgallkgldkllseetg 298
                 + ++v se  e  e+l +p +       i e + ++++++  +  + +  ++ivl+GG+++  gl + l++e++
  KHJ35003.1 247 RVIRVGSErfEAPECLFQPhLVDveqpgIAEFLFNTIQAANVDVRSSL-YKAIVLSGGSSMYPGLPSRLEKEIK 319
                 666666661145566655424331112245555555555555555554.479**************99999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       367  (0.0204696); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.27s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 2945.84
//
Query:       KHJ35004.1  [L=482]
Description: putative phd domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-08   34.8   7.3    1.9e-08   34.0   7.3    1.4  1  PHD          PHD-finger
    0.00063   19.2   3.5    0.00063   19.2   3.5    2.3  2  PHD_2        PHD-finger
     0.0032   17.4   1.6     0.0077   16.1   1.6    1.6  1  Prok-RING_1  Prokaryotic RING finger family 1
     0.0066   16.7   1.3      0.012   15.8   1.3    1.3  1  FYVE_2       FYVE-type zinc finger
     0.0089   15.9   2.7     0.0089   15.9   2.7    2.1  2  C1_1         Phorbol esters/diacylglycerol binding domain (C1
  ------ inclusion threshold ------
      0.019   14.6   1.5      0.058   13.0   1.5    1.8  1  zf-PHD-like  PHD/FYVE-zinc-finger like domain
      0.047   13.8   1.9       0.16   12.1   0.5    2.4  2  PknG_rubred  Protein kinase G rubredoxin domain
        4.6    7.4   7.0         37    4.5   7.0    2.2  1  DZR          Double zinc ribbon
        6.7    7.0   6.3         53    4.1   0.1    2.4  2  zf-B_box     B-box zinc finger


Domain annotation for each model (and alignments):
>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   7.3   9.8e-12   1.9e-08       2      51 ..     216     268 ..     215     269 .. 0.87

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 9.8e-12
                 BTTTTS.TTSTTSCEEEETTTSCEEETTTSSSTHSHHSHHSS..TBSSTTTHT CS
         PHD   2 CavCkk.ksdeeeelvqCdgCkrwfHqkClkppleseekpeg..ewlCekCke 51 
                 C+ C++  s +++ +v+CdgC+   Hq+C+kp   ++ ++ +  +w+C +C++
  KHJ35004.1 216 CKRCGRgYSPQNNLIVFCDGCNLPWHQNCHKPMIPDDAVQVEsaHWFCAECSR 268
                 999***988899*******************9877666665567*******87 PP

>> PHD_2  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1      0.39   7.7e+02      27      35 ..     211     219 ..     205     220 .. 0.70
   2 !   19.2   3.5   3.2e-07   0.00063       1      35 [.     227     266 ..     227     267 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.39
       PHD_2  27 geeWlCrrC 35 
                 +e+ lC+rC
  KHJ35004.1 211 QEQALCKRC 219
                 456789999 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 3.2e-07
       PHD_2   1 tnpllsCdkCsvaVHasCYGvskesdgee.....WlCrrC 35 
                 +n++++Cd+C++  H++C +   ++d+++     W C+ C
  KHJ35004.1 227 NNLIVFCDGCNLPWHQNCHKPMIPDDAVQvesahWFCAEC 266
                 599****************965555554445899****** PP

>> Prok-RING_1  Prokaryotic RING finger family 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   1.6   3.9e-06    0.0077       4      36 ..     213     246 ..     210     248 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 3.9e-06
  Prok-RING_1   4 gkkCpvCgkelkeedD.iVvCpeCgtpyHraCye 36 
                  +  C+ Cg+  ++++  iV C+ C  p+H++C +
   KHJ35004.1 213 QALCKRCGRGYSPQNNlIVFCDGCNLPWHQNCHK 246
                  678********998654899************87 PP

>> FYVE_2  FYVE-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   1.3     6e-06     0.012      41     108 ..     200     274 ..     193     278 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 6e-06
      FYVE_2  41 skrellgnqaklgethCilCleefkllvnskrqCldCklnvCkkCsve.......nkkekvwlCkiCseaRevkk 108
                   r+ + +++  ++  C +C + +    n  + C+ C+l   ++C +        + +   w C+ Cs+++ +k 
  KHJ35004.1 200 YSRRRTPSRKAQEQALCKRCGRGYSPQNNLIVFCDGCNLPWHQNCHKPmipddavQVESAHWFCAECSRKKGIKS 274
                 444555555778899**************************99999988999998889999*******9998875 PP

>> C1_1  Phorbol esters/diacylglycerol binding domain (C1 domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   2.7   4.5e-06    0.0089       6      46 ..     208     248 ..     204     255 .. 0.90
   2 ?    0.5   0.5       0.3   5.9e+02      25      36 ..     257     268 ..     253     270 .. 0.79

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.5e-06
                 E--SS--B-TTT-SB--SSSS-EEEETTT--EE-CCCCTTS CS
        C1_1   6 rnfkqptfCkhCgeflwgkekqglkCswCkllvHkkChekv 46 
                 r++++++ Ck Cg   + ++  ++ C+ C+l  H++Ch+ +
  KHJ35004.1 208 RKAQEQALCKRCGRGYSPQNNLIVFCDGCNLPWHQNCHKPM 248
                 5678999*********88********************976 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.3
                 SS-EEEETTT-- CS
        C1_1  25 ekqglkCswCkl 36 
                 e+ ++ C++C++
  KHJ35004.1 257 ESAHWFCAECSR 268
                 577899999986 PP

>> zf-PHD-like  PHD/FYVE-zinc-finger like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   1.5   2.9e-05     0.058       1      30 [.     216     245 ..     216     268 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 2.9e-05
  zf-PHD-like   1 CdtCaeskdeekgqlvyCqGCslsyhkaCl 30 
                  C+ C+   + ++  +v+C GC l +h++C 
   KHJ35004.1 216 CKRCGRGYSPQNNLIVFCDGCNLPWHQNCH 245
                  999**9999999*****************5 PP

>> PknG_rubred  Protein kinase G rubredoxin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.5   8.3e-05      0.16      20     125 ..     112     224 ..      90     230 .. 0.73
   2 ?   -0.7   0.0      0.75   1.5e+03      88     104 ..     256     272 ..     248     283 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 8.3e-05
                  XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXETTTTEEEE------TTGGG-CSS---GGG-B-TTT--B-S........---SS- CS
  PknG_rubred  20 vstqavfRpevdddedsaslealsteastrsasatrslspvrrlGgGLveiprvveadPleAlltnpvvpEskRfCwrCGrpvG........Rseker 109
                  ++ ++++ ++v++ + s++++ ++t+ + +   + +s +++  l   + ++    e+d  +Al + p ++ s R   +  + v         R +  r
   KHJ35004.1 112 ITPTSISASNVGKGKTSTKNSRAKTSGKRK-RGKDKSDESDEDLNENMLQLSADSEIDDSDALTKLPKITQSGRHIVKPTQFVPatyesysrRRTPSR 208
                  345567778887666655555555544444.556668889999*********************************9977766422222222666778 PP

                  ---SEEE-TTT--EEE CS
  PknG_rubred 110 kgaseGtCpkCgspys 125
                  k++++ +C++Cg  ys
   KHJ35004.1 209 KAQEQALCKRCGRGYS 224
                  ***************8 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.75
                  --GGG-B-TTT--B-S- CS
  PknG_rubred  88 vpEskRfCwrCGrpvGR 104
                  v+ ++ fC++C r+ G 
   KHJ35004.1 256 VESAHWFCAECSRKKGI 272
                  66678899999998774 PP

>> DZR  Double zinc ribbon
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   7.0     0.018        37       1      35 [.     216     267 ..     206     274 .. 0.69

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.018
         DZR   1 CpqCgeelppdar...fCseCgtklkavaa..............edrCpsCg 35 
                 C++Cg+  +p+++   fC+ C+ +  +  +              + +C +C+
  KHJ35004.1 216 CKRCGRGYSPQNNlivFCDGCNLPWHQNCHkpmipddavqvesaHWFCAECS 267
                 7778877777777777888888776644445566666666666666666666 PP

>> zf-B_box  B-box zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   2.6     0.028        56       2      29 ..     212     244 ..     211     249 .. 0.85
   2 ?    4.1   0.1     0.026        53      12      22 ..     257     267 ..     252     269 .. 0.86

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.028
    zf-B_box   2 eetkCpeHk.....nkpatlfCedCqqplCeeC 29 
                 e+  C++++     +++++ fC  C+ p  ++C
  KHJ35004.1 212 EQALCKRCGrgyspQNNLIVFCDGCNLPWHQNC 244
                 567899999999999**********99877776 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.026
    zf-B_box  12 kpatlfCedCq 22 
                 ++a++fC +C+
  KHJ35004.1 257 ESAHWFCAECS 267
                 789*******7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       929  (0.0518155); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.38
# Mc/sec: 3790.69
//
Query:       KHJ35005.1  [L=369]
Description: putative glycoside hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
        0.1   12.3   4.3       0.38   10.4   0.0    3.1  3  Neurensin  Neurensin


Domain annotation for each model (and alignments):
>> Neurensin  Neurensin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.7      0.06   1.1e+03     102     116 ..      18      35 ..       8      63 .. 0.62
   2 ?    1.0   0.1     0.018   3.2e+02      84     115 ..     165     198 ..     147     214 .. 0.73
   3 ?   10.4   0.0   2.1e-05      0.38      69     111 ..     232     273 ..     225     289 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.06
   Neurensin 102 llclGglll...alsllv 116
                 ++++G+l+l   +++ll+
  KHJ35005.1  18 IISIGCLILsslLVCLLI 35 
                 455555543111334433 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.018
   Neurensin  84 qaiefnnaLdtlklaGavllcl..Gglllalsll 115
                  ++++  +L+++ +  ++ +cl  G++ll+l l 
  KHJ35005.1 165 PVLKHYPILHIIVTYSTIFFCLslGSVLLILILY 198
                 5677888899999999999885337777776654 PP

  == domain 3  score: 10.4 bits;  conditional E-value: 2.1e-05
   Neurensin  69 lelvksegelvvvDkqaiefnnaLdtlklaGavllclGgllla 111
                 +e++ ++ ++ + D++  ++n+aL t  ++G+v++++  +ll+
  KHJ35005.1 232 IESY-GKVSYKIWDRKRFTYNKALVTRFTVGFVMMGFFEILLI 273
                 5666.788999************************99777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       773  (0.0431145); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2572.99
//
Query:       KHJ35006.1  [L=202]
Description: putative 60s ribosomal protein l16 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-10   39.9   0.0    3.6e-08   33.7   0.0    2.3  1  Ribosomal_L13  Ribosomal protein L13


Domain annotation for each model (and alignments):
>> Ribosomal_L13  Ribosomal protein L13
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.0     2e-12   3.6e-08       5     120 ..      10     115 ..       7     119 .. 0.77

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 2e-12
                    EEETTSBHHHHHHHHHHHHHTTTSTT--TTS--S-EEEEEEGGCBB-SSTHHTT-EEEE.E-SSTTSEEEEEHHHHHCCSHHHHHHHHHHCCS-SS CS
  Ribosomal_L13   5 iDAegqvlgrlaskiakvLrGkhkptytphvdcGdyvvvinaekvaltgkkleqkvyyr.htgypgglkevtakellekkpeeilekaVkgmLpkn 99 
                    iD +g+ lgrlas +ak L              G  +vv+ +e ++++g+  + k  y+ + + +   + ++   ++ + p++i+ k+V+gm+p++
     KHJ35006.1  10 IDGKGHLLGRLASIVAKQL------------LQGQKIVVVRCEALNISGEFFRAKLKYHaYLRKMTRYNPTRGGPFHFRAPSRIFYKTVRGMIPHK 93 
                    6777777777777777655............46888*************99988865540445555566667777*******************87 PP

                    H.HHHHHGCTEEEESSSTTSGG CS
  Ribosomal_L13 100 k.lgrrrlkrLkvyageehphe 120
                    +  g + l+rLkv++g   p++
     KHJ35006.1  94 TaRGAAALERLKVFEGVPPPYD 115
                    72566677********887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      480  (0.0267723); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1477.84
//
Query:       KHJ35007.1  [L=584]
Description: putative amp-binding enzyme [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.2e-67  225.5   0.0    1.1e-66  225.2   0.0    1.1  1  AMP-binding    AMP-binding enzyme
    3.4e-20   72.8   0.0    8.1e-20   71.6   0.0    1.7  1  AMP-binding_C  AMP-binding enzyme C-terminal domain


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  225.2   0.0   1.2e-70   1.1e-66      11     422 ..      47     471 ..      37     472 .. 0.79

  Alignments for each domain:
  == domain 1  score: 225.2 bits;  conditional E-value: 1.2e-70
                  SEEEEE...CCSTEEEEHHHHHHHHHHHHHHHHHTTSSTT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEEEETCTCC CS
  AMP-binding  11 kvalvd...sgegqtlTYreldervnrlAagLrslGvkkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseakvliatvdse 105
                  ++a++    +g   + TYre+ +r++ lA ++++       r++il+pn+p ++ +++ai  aG+++v  n +l++eelayi++ +e+ +++  vd++
   KHJ35007.1  47 AIAIHHvsiDGVLVRRTYREFADRACGLAYFFLK---YAYRRIGILAPNTPAFLESIFAIGAAGGIHVGANYRLKPEELAYIFAFAEVDCIV--VDAQ 139
                  5555445566777899*****************9...67789**************************************************..7666 PP

                  CHHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTT.S..............-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEH.HHHHHH CS
  AMP-binding 106 lleklleaaakleavklvivldadellkeeelkeeeeseeka.e..............kpeeeeelkpddlayiiYTSGTTGkPKGVmlsh.rnlvan 187
                    ++ll+   k +++ + i++d+d+++   ++ ++    e++ +              ++  ++++++d+++ + +TSGTT +PKGV+ +h ++++a+
   KHJ35007.1 140 Y-KSLLQLFLK-KHPNVHIIIDTDNSQVIGDSVNSY---ENSiRegtlwdaqtgnngwNNLSVHTVDEDSCIAVPFTSGTTARPKGVVFTHrGAYLAA 232
                  5.556666654.678888999988866554333333...222314567888999999944467799*************************6667777 PP

                  HHHHHHHHCSCCTT..T-EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHHHHCCCHHCHHHHCCGT CS
  AMP-binding 188 vaslkletrfklke..ddvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvleallesgalkaakkakdls 283
                  ++++ +e    l++  +  +l++lp++h++g+ ++ +++ ++ +t ++l+k +    +++++l++ + +t+++++P+v   l +s++         l+
   KHJ35007.1 233 LSNV-IESGLILENrkRCGYLWTLPMFHAVGW-TFPWAVTAARGTHYCLRKIDY---TVIWNLLKSEPITHFNAAPTVNTFLCASKDAI------CLP 319
                  7776.333333333226689************.888888888888888888866...3578*******************999964333......799 PP

                  T.-SEEEEESS-EBHHHHHHHHHHHTCEEEEEEEEGGGSSECEE.........CHCTTTCTSTTS-BEE-T.TEEEEEE..-TTTSCBEE...TTSE. CS
  AMP-binding 284 s.lrlvllggeplspellrffralfgeevlegYGlTEttgvvtv.........lpleedkkklgsvGkplp.gvevkiv..Deetgepvp...dgee. 364
                    +r++ ++++p+ p ll+++ ++   + +++YG+TEt g +t          lp +e+ ++  ++G  +     ++i+  D+ +  ++    +g+e 
   KHJ35007.1 320 TpVRVT-VAASPPTPYLLQRMTEINLIP-IHVYGMTETYGPITKnyykpewnsLPSQEKYARMARQGYGFItSLPIRIIrtDQPDDVLIDvqkNGQEi 415
                  999995.7****************9886.689*********955557899989666677677777774432255666663344433333233466668 PP

                  EEEEEEETTS-SEBTT-HHHHHHHEEETCCEEEEEEEEEEETTSEEEEEEECCCEEEE CS
  AMP-binding 365 GellvrgpgvmkgYlkkpeataeafdsegrwlrTGDlgrldedGyleivgRkkdlikl 422
                  Ge+++ g++ +k Yl++peat++ +   g+ l++GDl++++ dG+ +i++Rkkd+i++
   KHJ35007.1 416 GEIVFMGNNCAKEYLNDPEATKKLWA--GGVLHSGDLAVWHSDGSAQILDRKKDIIIS 471
                  **********************9997..57**************************86 PP

>> AMP-binding_C  AMP-binding enzyme C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.6   0.0   9.1e-24   8.1e-20       2      76 .]     481     568 ..     480     568 .. 0.88

  Alignments for each domain:
  == domain 1  score: 71.6 bits;  conditional E-value: 9.1e-24
                    HHHHHHSSTTEEEEEEE-----TTS---EEEEEE---....---........HHHHHHHHHHH..HT-TTTS-SEEEE-S---B-TTS- CS
  AMP-binding_C   2 vEsalvshpaVaeaaVvGvpdevkGealvafVvlkdg....sea........leeeLkahvrk..elgpyavpkkvvfvdelpktrsGK 76 
                    +Es l++hpa+ eaaVvGvpd  +Ge++vaf++ k+     + +        + +++ ++++k   +  ++ p+++++v +lpkt sGK
     KHJ35007.1 481 LESMLARHPAILEAAVVGVPDSEWGERPVAFIICKESseilK-PlavssppsISRDILEWAKKesSISRFMMPREIHIVTSLPKTSSGK 568
                    7*********************************86444431.245566789*********77679**********************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (584 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 4230.05
//
Query:       KHJ35008.1  [L=89]
Description: hypothetical protein EV44_g0534 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.012   15.4   0.3      0.017   15.0   0.3    1.2  1  Rick_17kDa_Anti  Glycine zipper 2TM domain


Domain annotation for each model (and alignments):
>> Rick_17kDa_Anti  Glycine zipper 2TM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.3   9.3e-07     0.017       2      18 ..      44      60 ..      43      66 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 9.3e-07
  Rick_17kDa_Anti  2 GaliGAaaGgvaGaaig 18
                     Gal+GA++Ggv  ++ +
       KHJ35008.1 44 GALMGAVVGGVGAHLYH 60
                     99*********999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (89 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1301  (0.072564); expected 358.6 (0.02)
Passed bias filter:                      729  (0.0406604); expected 358.6 (0.02)
Passed Vit filter:                        78  (0.00435049); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 651.66
//
Query:       KHJ35009.1  [L=1885]
Description: putative tata-binding protein-associated factor mot1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.4e-129  433.2   1.2     1e-128  430.3   0.5    2.6  3  DUF3535          Domain of unknown function (DUF3535)
    2.6e-61  207.3   0.0    6.8e-61  205.9   0.0    1.7  1  SNF2_N           SNF2 family N-terminal domain
    4.2e-19   68.9   0.0    4.8e-18   65.5   0.0    2.6  2  Helicase_C       Helicase conserved C-terminal domain
    2.5e-14   52.1  13.3       0.19   12.1   0.1    8.9  9  HEAT             HEAT repeat
    8.6e-07   29.5   0.6        0.4   11.3   0.0    4.2  3  Vac14_Fab1_bd    Vacuolar 14 Fab1-binding region
    1.9e-06   28.1   3.6      0.025   14.9   0.0    6.6  7  HEAT_2           HEAT repeats
    0.00097   19.4   0.1         12    6.3   0.0    5.3  6  TAF6_C           TAF6 C-terminal HEAT repeat domain
     0.0021   18.6   7.9         31    5.2   0.0    7.3  7  HEAT_EZ          HEAT-like repeat
     0.0021   17.7   0.6        2.7    7.5   0.1    3.6  3  CLASP_N          CLASP N terminal
      0.005   16.6   0.2        4.5    7.0   0.0    3.1  2  TIP120           TATA-binding protein interacting (TIP20)
  ------ inclusion threshold ------
      0.039   13.9   0.4          2    8.4   1.3    2.7  2  Phe_tRNA-synt_N  Aminoacyl tRNA synthetase class II, N-termin
       0.15   11.2   0.0       0.28   10.4   0.0    1.3  1  ERCC3_RAD25_C    ERCC3/RAD25/XPB C-terminal helicase


Domain annotation for each model (and alignments):
>> DUF3535  Domain of unknown function (DUF3535)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       0.4   6.1e+02     104     122 ..      46      64 ..      15      81 .. 0.78
   2 !  430.3   0.5    7e-132    1e-128       2     434 ..     626    1080 ..     625    1081 .. 0.95
   3 ?   -1.6   0.0       0.8   1.2e+03     107     135 ..    1147    1174 ..    1131    1185 .. 0.66

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.4
     DUF3535 104 anviraRiaaakaLGllls 122
                 +    +RiaaakaLG ++ 
  KHJ35009.1  46 YKTWDTRIAAAKALGGIVD 64 
                 457789*********8776 PP

  == domain 2  score: 430.3 bits;  conditional E-value: 7e-132
     DUF3535    2 WenLvrea..sleallhaacphlsswlcLamtPigv.....pldpslllkpsgqaksssek..........kkkkeeeasskrkrskkkaeakgeka 81  
                  W +Lv+++  ++++l++++++h++++++La++Pigv     p+++sl+ kpsg+++s s++            + e +++++   ++k++++ +   
  KHJ35009.1  626 WVALVTHLakDPGHLAQEFSAHVDPLMQLALHPIGVsrhplPMNASLFQKPSGNTYSLSTDfvssvaksylPATIEPPPKKQ---RRKSTKNVEPMP 719 
                  99********************************************************999****99977633333333333...333344444455 PP

     DUF3535   82 sasshnvdkeyiggdetlvgeeanviraRiaaakaLGlllsylpeespldcytkvLlghLnsksalqrlvaalvieewakedkkekkevstlpetlq 178 
                   +s h+vd+++++gd++lvg+e ++ir++i+aa+a+Gll+s +p e  l++y   L++ ++s++a+++l++ l+++e+ak+++    +++++  ++ 
  KHJ35009.1  720 VTSAHDVDGHMMHGDVDLVGME-TLIRSKIYAARAMGLLMSFIPLEV-LEFYDASLIPAFSSAFASTQLTSLLIVDEYAKNCT----NKEPAIGKFM 810 
                  67779*****************.*********************877.**********************************7....55679***** PP

     DUF3535  179 eklleiLeeeepvyYdElalsltrlrqecqdllatlesvg.....klpklavvvqgeae...kaftleqaeklvttdyekllkslslkqkllaekqL 267 
                  + l++i+e+++p+yY++l++s++ +r++c++l++t+++vg     +lp lavvvqgeae   +af+l+ ae++v +d+ekl+ks+s  q+++a+++L
  KHJ35009.1  811 KPLQAIIESARPFYYRDLVSSMQLIRAQCSQLFNTFRDVGkisqsRLPVLAVVVQGEAEagpDAFSLQIAERCVAEDFEKLKKSMSAAQRMIATQAL 907 
                  ************************************************************************************************* PP

     DUF3535  268 eerrrrlqaaieeakeeqealhvrvqaalAgAlvalkelPkKLnpvikpLMeSiKkEeneeLQqrsAkalakLielcvdr.kpcpndKIvkNLctfl 363 
                  +e+r ++++ai++ak+ +e++++r+++++A+Alva+++ PkK++++ik++M+S+KkEen eLQq+sA+++a+L+el+++  +p+p++KIv+NL +f 
  KHJ35009.1  908 NEARDNVLEAISNAKALKEQRDIRIKSSAASALVAMRASPKKPTHIIKGMMDSVKKEENFELQQLSAHSIARLVELFTEGgRPGPAQKIVSNLAKFS 1004
                  ************************************************************************************************* PP

     DUF3535  364 csDtsetPef.....kkegIltlkkeedkaeaadaaeeeeeakeariqrrGAelaLetlakkFgasLfekvPkLwe 434 
                  c DtsetPef      +++Il+l+keed+++++daa++++eakeari rrGA++aLe++++ Fga+L++kvP++++
  KHJ35009.1 1005 CIDTSETPEFipnasFENNILSLRKEEDRRDHPDAAKFAREAKEARIVRRGAKEALEHISDIFGAQLLDKVPTFRK 1080
                  *************************************************************************976 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.8
     DUF3535  107 iraRiaaakaLGlllsylpeespldcytk 135 
                     R++aak L+ ++s ++ e  + ++ +
  KHJ35009.1 1147 SVFRYMAAKCLATVCSVITLEG-MTFLVD 1174
                  4468888888888888887555.444444 PP

>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.9   0.0   4.5e-64   6.8e-61      55     350 .]    1311    1600 ..    1296    1600 .. 0.87

  Alignments for each domain:
  == domain 1  score: 205.9 bits;  conditional E-value: 4.5e-64
                  T--EEE---TTS--HHHHHHHHH...HHTTTS---...........S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH------------- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N   55 vrGGiLaDemGLGKTvqvlalilaqrakeekdkek....krkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapkll 147 
                  +  GiL+D+mGLGKT+q+l++++   +++++++e+    k+ d ++ p Liv+P +l  +W++ei+++++  + + + +  +       ++ ++++l
  KHJ35009.1 1311 HLHGILCDDMGLGKTLQTLCIVA---SDHHMRAEEyartKAPDFRRLPSLIVCPPTLSGHWQQEIATYAPFLTCTAYFGPPGD------RVKLRDQL 1398
                  567********************...5555555555556888999***************************99999988875......455679** PP

                  ----EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  148 adydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkl 244 
                   ++d+vit+Yd+ +++a      + l+  +w+++vlDEgh +kn  +k++ av+ L +++r+il+GTPiqn++ +l++L++fL+++ +g+ ++f ++
  KHJ35009.1 1399 GKTDIVITSYDICRNDA------EILTPFNWNYLVLDEGHLIKNPRAKITLAVKLLLSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDR 1489
                  **************999......9************************************************************************* PP

                  THHHHH............HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-H CS
                  xxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  245 lqrpie............aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalksssks 329 
                  + +pi+            +     ++ L++ + +++lrr k++v  +lPpk+ +  +++ls+ +rk++n    + +kk  a+l +    a + +++ 
  KHJ35009.1 1490 FAKPIAasryskssskeqEAGALAIEALHKQVLPFLLRRLKEEVLDDLPPKILQNYYCDLSDLQRKLFN----DFTKKEGASLINA---ACSGDKEA 1579
                  *************99766666667899999999************************************....3333334443333...33334434 PP

                  HH-HHHHHHHHHHHHH---XX CS
                  xxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  330 kekilelllelrqacnhpqlv 350 
                  k++i++ l+  r+ cn+p lv
  KHJ35009.1 1580 KQHIFQALQYMRKLCNSPTLV 1600
                  467999999*******99875 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.5   0.0   3.2e-21   4.8e-18      14     111 .]    1660    1762 ..    1651    1762 .. 0.89
   2 ?   -0.6   0.0       1.1   1.6e+03      47      79 ..    1801    1833 ..    1768    1838 .. 0.77

  Alignments for each domain:
  == domain 1  score: 65.5 bits;  conditional E-value: 3.2e-21
                  TTTSEEEEEESSHHHHHH..HHHHHHHT..TSTEEEESTTSTHHHHHHHHHHHH.TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSSHHHHHHHH CS
  Helicase_C   14 eeggkilifvntidrlek..vklllekk..gikvavlhgelpqnereeileqfn.kgesd.vLiatdvaerGidipkvnlVinfdlprnvtsyiqri 104 
                  ++ +++lif++ +++l+    ++l ++   +i++++l+g+ +++ r+ i+++fn + ++d +L++t+v++ G++++++++Vi+++ ++n+++  q++
  KHJ35009.1 1660 VSPHRALIFCQMKEMLDLvaNTVL-RTLlpSIQYLRLDGSVESSRRQNIVNKFNsDPSYDcLLLTTSVGGLGLNLTGADTVIFVENDWNPQKDLQAM 1755
                  57899***********88853333.333579***********************8899**999********************************** PP

                  TTSSSTT CS
  Helicase_C  105 GRtgRag 111 
                  +R++R+g
  KHJ35009.1 1756 DRAHRIG 1762
                  *****97 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.1
                  STTSTHHHHHHHHHHHHTTSSSEEEESGGGTSS CS
  Helicase_C   47 hgelpqnereeileqfnkgesdvLiatdvaerG 79  
                  ++ l + e ++il+ fn g+s++L a  ++ +G
  KHJ35009.1 1801 NAGLGSMETDQILDLFNLGDSNILPAPGDINQG 1833
                  4458888999*************9887777777 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0   0.00057      0.85       2      29 ..      37      64 ..      36      66 .. 0.86
   2 ?    5.0   0.0     0.024        35       7      29 ..     316     338 ..     310     340 .. 0.82
   3 ?   -0.6   0.0       1.6   2.3e+03      15      28 ..     390     403 ..     382     406 .. 0.81
   4 !    8.8   0.0    0.0014       2.1       2      28 ..     466     492 ..     465     495 .. 0.88
   5 !    6.8   0.0    0.0063       9.5       1      28 [.     560     587 ..     560     589 .. 0.92
   6 ?   -3.1   0.0       9.6   1.4e+04      13      25 ..     896     908 ..     889     909 .. 0.80
   7 ?   -3.1   0.1       9.7   1.5e+04      14      27 ..     930     943 ..     928     943 .. 0.82
   8 !   12.1   0.1   0.00013      0.19       1      30 [.    1134    1163 ..    1134    1164 .. 0.93
   9 !    9.8   0.0   0.00071       1.1       2      29 ..    1216    1242 ..    1214    1244 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00057
                HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT  2 lPlllkllsDpspeVReaAakaLgalae 29
                l  ++  l+ + ++ R aAakaLg ++ 
  KHJ35009.1 37 LTRVVPYLRYKTWDTRIAAAKALGGIVD 64
                56677889999**************987 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.024
                 HHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   7 kllsDpspeVReaAakaLgalae 29 
                   l D+ +e+R  Aa  L ++++
  KHJ35009.1 316 VDLFDSQWEIRHGAAMGLREIMR 338
                 4478***************9986 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 1.6
                 HHHHHHHHHHHHHH CS
        HEAT  15 eVReaAakaLgala 28 
                  +Re++ ++Lgal+
  KHJ35009.1 390 PIRETVGQTLGALL 403
                 49**********97 PP

  == domain 4  score: 8.8 bits;  conditional E-value: 0.0014
                 HHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgala 28 
                 + +++k l D++ +VR+ +a +L  +a
  KHJ35009.1 466 IRAVMKGLGDCDDDVRAVSAATLIPIA 492
                 67899*****************98776 PP

  == domain 5  score: 6.8 bits;  conditional E-value: 0.0063
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgala 28 
                 l+P l   l+++  +VR+a+++aL +++
  KHJ35009.1 560 LVPRLYPFLRHTIISVRSAVLRALLTFV 587
                 78999*******************8886 PP

  == domain 6  score: -3.1 bits;  conditional E-value: 9.6
                 SHHHHHHHHHHHH CS
        HEAT  13 speVReaAakaLg 25 
                 s+ +R+ A +aL 
  KHJ35009.1 896 SAAQRMIATQALN 908
                 7889******996 PP

  == domain 7  score: -3.1 bits;  conditional E-value: 9.7
                 HHHHHHHHHHHHHH CS
        HEAT  14 peVReaAakaLgal 27 
                  ++ ++Aa aL+a+
  KHJ35009.1 930 IRIKSSAASALVAM 943
                 678999*****985 PP

  == domain 8  score: 12.1 bits;  conditional E-value: 0.00013
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgalaev 30  
                  llP+++++l+++ +  R++Aak+L+++++v
  KHJ35009.1 1134 LLPTIVEALHSKLSVFRYMAAKCLATVCSV 1163
                  89*******9999999************97 PP

  == domain 9  score: 9.8 bits;  conditional E-value: 0.00071
                  HHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT    2 lPlllkllsDpspeVReaAakaLgalae 29  
                  +P+ l  +sD++++VR  A  ++++l++
  KHJ35009.1 1216 VPV-LGRMSDSNSDVRLLATTSFATLVK 1242
                  555.5557*****************998 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.3   0.0   0.00026       0.4       4      91 ..     438     532 ..     435     537 .. 0.76
   2 ?    4.8   0.0     0.029        44      18      67 ..    1124    1173 ..    1108    1192 .. 0.78
   3 !    9.2   0.0    0.0012       1.9       3      58 ..    1189    1244 ..    1187    1248 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00026
  Vac14_Fab1_bd   4 kggligLaavaialekk....ikeyleeivkpvlkcfsDkdsrvRyyacEslyniak...vakgevlk.llneifdalvklvaDsdesvksgaell 91 
                    +gg+ig+  + +a++++     +  ++ +++ v+k + D d+ vR  ++ +l  ia+   +++ e+l+ l+n ++++l++l  D  +s  +  +ll
     KHJ35009.1 438 HGGMIGMRYL-VAVRNDlllnDNYLIDGVIRAVMKGLGDCDDDVRAVSAATLIPIARefvTLRPEALEkLINIVWECLSNLGDDLSASTGQIMDLL 532
                    7999998643.555555555367789******************************9333357788873567889999999888877766655555 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.029
  Vac14_Fab1_bd   18 ekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlklln 67  
                     + ++ +++ +++++++++++ k s  Ry a+ +l  ++ v+  e +++l 
     KHJ35009.1 1124 HPELYSFITNLLPTIVEALHSKLSVFRYMAAKCLATVCSVITLEGMTFLV 1173
                     45578899*****************************9999888777664 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.0012
  Vac14_Fab1_bd    3 rkggligLaavaialekkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakva 58  
                     r+g++ +++ +   ++ +i +y+  ++ pvl  +sD++s vR  a+ s+  ++k +
     KHJ35009.1 1189 RQGAIEAIYHLINVMSDRILPYVIFLIVPVLGRMSDSNSDVRLLATTSFATLVKLV 1244
                     7888888888877778889999999********************99998888865 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   1.7e-05     0.025       7      59 ..       5      63 ..       2      74 .. 0.77
   2 ?   -0.5   0.0       1.1   1.6e+03      42      58 ..     320     336 ..     308     344 .. 0.60
   3 ?   -1.1   0.0       1.7   2.6e+03       4      37 ..     469     507 ..     464     513 .. 0.54
   4 ?    1.3   0.0      0.32   4.7e+02      32      55 ..     560     583 ..     539     601 .. 0.76
   5 ?    0.1   0.2       0.7   1.1e+03      11      62 ..     894     948 ..     888     980 .. 0.62
   6 ?    3.3   0.0     0.073   1.1e+02      21      58 ..    1116    1160 ..    1098    1197 .. 0.67
   7 ?   -1.4   0.0       2.1   3.1e+03      39      52 ..    1221    1234 ..    1173    1242 .. 0.65

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.7e-05
      HEAT_2  7 alendpdpevrraairaLg..rignp....ealpaLvellededpavRraaaeaLgaig 59
                +le+ + p +r +a+++L+  ++++p     +l  +v++l+ + +++R aaa+aLg i 
  KHJ35009.1  5 LLETGSTPLIRNTAAQQLAdvQKAHPeelfNLLTRVVPYLRYKTWDTRIAAAKALGGIV 63
                67888999***********88555555344445666666699*************9774 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 1.1
      HEAT_2  42 dedpavRraaaeaLgai 58 
                 d+ +++R+ aa+ L +i
  KHJ35009.1 320 DSQWEIRHGAAMGLREI 336
                 45555555555555544 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1.7
      HEAT_2   4 LlqalendpdpevrraairaLgrignp......ealpaLv 37 
                  ++ l  d d++vr+  + +L  i+ +      eal+ L+
  KHJ35009.1 469 VMKGL-GDCDDDVRAVSAATLIPIAREfvtlrpEALEKLI 507
                 44556.6777777776665555443333333335555555 PP

  == domain 4  score: 1.3 bits;  conditional E-value: 0.32
      HEAT_2  32 alpaLvellededpavRraaaeaL 55 
                 ++p L ++l+++   vR a+ +aL
  KHJ35009.1 560 LVPRLYPFLRHTIISVRSAVLRAL 583
                 48999******************9 PP

  == domain 5  score: 0.1 bits;  conditional E-value: 0.7
      HEAT_2  11 dpdpevrraairaLgrignp..ealpaLvellededpavRraaaeaLgaig.dpe 62 
                 + + + r  a +aL + ++   ea+     l e  d ++   aa aL+a++ +p+
  KHJ35009.1 894 SMSAAQRMIATQALNEARDNvlEAISNAKALKEQRDIRIKSSAASALVAMRaSPK 948
                 5555556666666665555333555555555566777777777778777752344 PP

  == domain 6  score: 3.3 bits;  conditional E-value: 0.073
      HEAT_2   21 iraLg.rignp......ealpaLvellededpavRraaaeaLgai 58  
                  iraL  +++++       +lp++ve+l ++ +  R++aa+ L+ +
  KHJ35009.1 1116 IRALVpKMHPElysfitNLLPTIVEALHSKLSVFRYMAAKCLATV 1160
                  33333434443555555679********************99866 PP

  == domain 7  score: -1.4 bits;  conditional E-value: 2.1
      HEAT_2   39 llededpavRraaa 52  
                   ++d++++vR  a 
  KHJ35009.1 1221 RMSDSNSDVRLLAT 1234
                  34566666666665 PP

>> TAF6_C  TAF6 C-terminal HEAT repeat domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.0    0.0081        12      22      67 ..      14      59 ..       6      64 .. 0.80
   2 ?    0.1   0.0      0.71   1.1e+03      18      43 ..      47      72 ..      42      76 .. 0.83
   3 ?    2.1   0.0      0.16   2.4e+02      16      39 ..     319     342 ..     290     355 .. 0.88
   4 ?    2.3   0.0      0.15   2.2e+02      21      71 ..     479     529 ..     465     537 .. 0.89
   5 ?   -2.3   0.0       3.8   5.6e+03      14      38 ..     961     985 ..     936     987 .. 0.78
   6 ?   -0.9   0.0       1.4   2.1e+03      21      36 ..    1148    1163 ..    1129    1180 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0081
      TAF6_C 22 LRdfAAslLakilkkysssyktLkprvtrtllkvlldpkkslgtly 67
                +R+ AA++La + k ++++  +L +rv+  l     d+   +++++
  KHJ35009.1 14 IRNTAAQQLADVQKAHPEELFNLLTRVVPYLRYKTWDTRIAAAKAL 59
                8**************************9998765556555555444 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.71
      TAF6_C 18 dhwaLRdfAAslLakilkkysssykt 43
                ++w+ R  AA+ L+ i+++ ++  ++
  KHJ35009.1 47 KTWDTRIAAAKALGGIVDNAEKFDPN 72
                68**************9998776655 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.16
      TAF6_C  16 ledhwaLRdfAAslLakilkkyss 39 
                  + +w++R  AA  L +i++ +++
  KHJ35009.1 319 FDSQWEIRHGAAMGLREIMRAHGH 342
                 5789***************98876 PP

  == domain 4  score: 2.3 bits;  conditional E-value: 0.15
      TAF6_C  21 aLRdfAAslLakilkkysssyktLkprvtrtllkvlldpkkslgtlyGall 71 
                 ++R  +A +L  i++++ +  ++  +++++++ + l +  ++l++  G ++
  KHJ35009.1 479 DVRAVSAATLIPIAREFVTLRPEALEKLINIVWECLSNLGDDLSASTGQIM 529
                 68*****************************99999999999988888876 PP

  == domain 5  score: -2.3 bits;  conditional E-value: 3.8
      TAF6_C  14 seledhwaLRdfAAslLakilkkys 38 
                  + e++++L +++A+ +a++++ ++
  KHJ35009.1 961 VKKEENFELQQLSAHSIARLVELFT 985
                 4567779**********99998775 PP

  == domain 6  score: -0.9 bits;  conditional E-value: 1.4
      TAF6_C   21 aLRdfAAslLakilkk 36  
                   +R +AA+ La++++ 
  KHJ35009.1 1148 VFRYMAAKCLATVCSV 1163
                  5799**********86 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.27   4.1e+02      20      53 ..      31      60 ..      12      67 .. 0.63
   2 ?   -0.2   0.0         1   1.5e+03       1      12 [.     323     334 ..     323     343 .. 0.82
   3 ?    5.2   0.0     0.021        31      15      49 ..     449     485 ..     441     489 .. 0.72
   4 ?    1.4   0.0      0.32   4.7e+02      24      52 ..     559     583 ..     518     583 .. 0.84
   5 ?    0.2   0.0      0.77   1.2e+03      25      53 ..    1130    1158 ..    1107    1160 .. 0.69
   6 ?    5.0   0.0     0.024        35       4      49 ..    1189    1234 ..    1187    1240 .. 0.76
   7 ?   -0.8   0.1       1.6   2.4e+03      22      38 ..    1514    1530 ..    1506    1533 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.27
     HEAT_EZ 20 ellqplvpeilpaLlalLnddsd.eVRaaAagaLg 53
                e l  l+++++p+L       +  ++R aAa aLg
  KHJ35009.1 31 EELFNLLTRVVPYLR-----YKTwDTRIAAAKALG 60
                555556666666666.....666666666666665 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 1
     HEAT_EZ   1 wrvRraAawaLG 12 
                 w++R++Aa++L 
  KHJ35009.1 323 WEIRHGAAMGLR 334
                 99********94 PP

  == domain 3  score: 5.2 bits;  conditional E-value: 0.021
     HEAT_EZ  15 aggepellqp..lvpeilpaLlalLnddsdeVRaaAa 49 
                 a+ ++ ll++  l++ +++a +++L d++d+VRa +a
  KHJ35009.1 449 AVRNDLLLNDnyLIDGVIRAVMKGLGDCDDDVRAVSA 485
                 555555655555888999999999999999**98555 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.32
     HEAT_EZ  24 plvpeilpaLlalLnddsd.eVRaaAagaL 52 
                 +lvp++ p+L          +VR a+++aL
  KHJ35009.1 559 LLVPRLYPFLR-----HTIiSVRSAVLRAL 583
                 45666666666.....6777********98 PP

  == domain 5  score: 0.2 bits;  conditional E-value: 0.77
     HEAT_EZ   25 lvpeilpaLlalLnddsd.eV.RaaAagaLg 53  
                  +++ +lp  + +L   s+ +V R+ Aa +L+
  KHJ35009.1 1130 FITNLLPTIVEAL--HSKlSVfRYMAAKCLA 1158
                  6777777777777..5555999999999996 PP

  == domain 6  score: 5.0 bits;  conditional E-value: 0.024
     HEAT_EZ    4 RraAawaLGr..laggepellqplvpeilpaLlalLnddsdeVRaaAa 49  
                  R +A+ a+    + ++ ++ l+ ++  i+p L+ +++d++++VR  A 
  KHJ35009.1 1189 RQGAIEAI-YhlINVMSDRILPYVIFLIVPVLG-RMSDSNSDVRLLAT 1234
                  66666666.556777778999999999******.77788889998875 PP

  == domain 7  score: -0.8 bits;  conditional E-value: 1.6
     HEAT_EZ   22 lqplvpeilpaLlalLn 38  
                  ++ l++++lp+Ll++L+
  KHJ35009.1 1514 IEALHKQVLPFLLRRLK 1530
                  5667899*****99884 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0      0.18   2.7e+02     171     204 ..     459     492 ..     451     495 .. 0.82
   2 !    5.6   0.1    0.0068        10      55     115 ..     488     548 ..     466     553 .. 0.85
   3 !    7.5   0.1    0.0018       2.7      74     210 ..    1113    1247 ..    1102    1249 .. 0.70

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.18
     CLASP_N 171 sllldliekslkkgleDanptVRetaRstfweff 204
                 + l+d +  +++kgl D +  VR ++ +t++ ++
  KHJ35009.1 459 NYLIDGVIRAVMKGLGDCDDDVRAVSAATLIPIA 492
                 55677788999*************9999988665 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0068
     CLASP_N  55 leailkalssLrttlsstgchllkelaiqlkeqldpmveillptLlkllgdtKkiisqnan 115
                 l  i++ +  Lr     +++ ++ e++  l+++l ++  +++++L kl++    + ++++n
  KHJ35009.1 488 LIPIAREFVTLRPEALEKLINIVWECLSNLGDDLSASTGQIMDLLAKLCSFSEVLEAMKTN 548
                 567999999999999**********************************987666555555 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.0018
     CLASP_N   74 chllkelaiqlkeqldpmveillptLlkllgdtKkiisqnanqalaallsnasfsprilqv...lsvalqdKnvqpReysaiwLkilltrfeshksk 167 
                  +++++ l+   +++l +++ +llpt+++ l ++  +++  a+ +la+++s ++++   + v   l ++++    + R+ +++ +  l++ ++    +
  KHJ35009.1 1113 LSVIRALVPKMHPELYSFITNLLPTIVEALHSKLSVFRYMAAKCLATVCSVITLEGMTFLVdriLPSISNPVDLNFRQGAIEAIYHLINVMS---DR 1206
                  6678889999999*************************************999665544330003344444444555555555555555555...45 PP

     CLASP_N  168 leasllldliekslkkgleDanptVRetaRstfweffkvwPsr 210 
                  +    ++ li+++l + ++D+n+ VR  a + f ++ k +P +
  KHJ35009.1 1207 ILPYVIF-LIVPVLGR-MSDSNSDVRLLATTSFATLVKLVPLE 1247
                  5555555.57777766.47777777777777777777777655 PP

>> TIP120  TATA-binding protein interacting (TIP20)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.1    0.0064       9.5      62     112 ..     461     512 ..     450     556 .. 0.77
   2 !    7.0   0.0     0.003       4.5      40      97 ..    1186    1246 ..    1184    1250 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0064
      TIP120  62 dlselldrvlaGlsDe.hdikllcnlmlsklvalapeevlerldelvealrk 112
                  +  ++  v++Gl+D  +d+++++  +l+ ++    +   e l++l++ + +
  KHJ35009.1 461 LIDGVIRAVMKGLGDCdDDVRAVSAATLIPIAREFVTLRPEALEKLINIVWE 512
                 56678889*******99********999877665555544555555544444 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.003
      TIP120   40 LelRKaaYetlytlletaldrld..lselldrvlaGlsDe.hdikllcnlmlsklvalape 97  
                  L+ R+ a e +y l++ + dr+   ++ l+  vl  +sD+  d++ll+ +  + lv+l p 
  KHJ35009.1 1186 LNFRQGAIEAIYHLINVMSDRILpyVIFLIVPVLGRMSDSnSDVRLLATTSFATLVKLVPL 1246
                  789******************87445555666999*****9******99999999888775 PP

>> Phe_tRNA-synt_N  Aminoacyl tRNA synthetase class II, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.26   3.9e+02      18      37 ..     464     483 ..     463     498 .. 0.88
   2 ?    8.4   1.3    0.0014         2      28      60 ..     893     925 ..     888     931 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.26
                      CCCCCCCCTTTTCCCCTTTH CS
  Phe_tRNA-synt_N  18 GeltellkelgklppeeRke 37 
                      G + +++k+lg+ + + R+ 
       KHJ35009.1 464 GVIRAVMKGLGDCDDDVRAV 483
                      899**********9998875 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0014
                      TTCCCCTTTHHHHCCHHHHCCCCCCCCCHHHCC CS
  Phe_tRNA-synt_N  28 gklppeeRkeaGkliNelKqeieealeerkeel 60 
                      +++++ +R  a +++Ne+++ + ea++++k+  
       KHJ35009.1 893 KSMSAAQRMIATQALNEARDNVLEAISNAKALK 925
                      6899***********************998754 PP

>> ERCC3_RAD25_C  ERCC3/RAD25/XPB C-terminal helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00019      0.28      80     139 ..    1690    1750 ..    1676    1791 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00019
  ERCC3_RAD25_C   80 lkkpyiyGetseaerlkilqkfkknpkvntifls.kvgDtsiDlPeanvliqisshfgsrr 139 
                     +++  + G+++++ r++i++kf+++p++++++l   vg   ++l  a  +i ++ +   ++
     KHJ35009.1 1690 IQYLRLDGSVESSRRQNIVNKFNSDPSYDCLLLTtSVGGLGLNLTGADTVIFVENDWNPQK 1750
                     5666789***********************999637***************9998876543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1885 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 1.13u 0.31s 00:00:01.44 Elapsed: 00:00:00.51
# Mc/sec: 11049.61
//
Query:       KHJ35010.1  [L=603]
Description: putative serine threonine-protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.5e-38  130.8   0.0    8.6e-38  130.2   0.0    1.2  1  Pkinase      Protein kinase domain
    3.4e-26   92.1   0.0    4.6e-26   91.6   0.0    1.2  1  Pkinase_Tyr  Protein tyrosine kinase
    0.00094   18.6   0.0     0.0016   17.9   0.0    1.3  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.045   13.1   0.0      0.098   11.9   0.0    1.6  1  Kinase-like  Kinase-like


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.2   0.0   1.9e-41   8.6e-38       9     261 ..      63     327 ..      56     330 .. 0.84

  Alignments for each domain:
  == domain 1  score: 130.2 bits;  conditional E-value: 1.9e-41
                 EESSEEEEEEEETT...TTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHS.CTTB--EEEEEEE.....SSEEEEEEE--TTEBHHHHHH..HHSS-- CS
     Pkinase   9 eGsfGkVykaveke...tgkivAvKkikkekakkkkekkvlrEikilkklk.hpnivrlyevfee.....kdelylvleyveggeladlle..rkgsls 96 
                 eG+f+ Vy ++  +     +i  +K++++ ++++    ++++E++ +kklk h++iv++y++  +       e++l++e++++g l ++++   +  l+
  KHJ35010.1  63 EGGFAHVYLVKMPKpidGTDIAILKRVAVPDKEHLA--SMRTEVETMKKLKgHRHIVTYYDSHASqlkggGYEVFLLMEFCNEGGLINFMNtrLQNRLT 159
                 799999998876441214555566888877766655..6************************9999999999************999999543455** PP

                 HHHHHHHHHHHHHHHHHHHHTT..EE-SS-SGGGEEEETTTE...EEE-SGTTSEESSSSCS..........BCTTTSCGGGS-HHHH...TTSCBSHH CS
     Pkinase  97 eeeakkiakqilegleylHskg..iiHrDlKpeNiLidekge...lKitDFGlakelesssk..........ltsfvgtseYlAPEvl...keneyskk 177
                 e e+ +i++ ++ g++ +H  +  ++HrDlK eNiLi +kg    +K++DFG  +  +   +            +   t +Y++PE++   ++ ++++k
  KHJ35010.1 160 EPEILNIFSDVAVGVACMHYLKppLLHRDLKVENILITTKGGkrkFKLCDFGSTAPPQPAGStsaecrsieeDIQKHTTLQYRSPEMVdvyRKYPIDEK 258
                 *******************77767**************6554577********9988887777899999887667789**********97777777*** PP

                 HHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTS CS
     Pkinase 178 vDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqh 261
                 +D+W+lGv+ly+l + ++pf+++ +     ++l+            ++++p    +s+ +k l++++l++ pk R+ + ++l++
  KHJ35010.1 259 SDIWALGVLLYKLCFYTTPFEAQGQL----AILN-----------ASFTFPDYPIFSDRLKALIRSMLREPPKLRPNIYQVLRE 327
                 *********************22222....2333...........37899999*************************999976 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.6   0.0     1e-29   4.6e-26       3     256 ..      57     325 ..      55     328 .. 0.80

  Alignments for each domain:
  == domain 1  score: 91.6 bits;  conditional E-value: 1e-29
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS.-BTTB--EEEEEE.....SSSS..EEEEEE--TTEBHHHHH CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkkl.khpnivkllgvct.....keep..llivteyvkgGdLlkfL 92 
                  ++k   eG f++V+  ++   k  + +++a+ +  +  ++e+ +++ +e+++mkkl  h++iv ++               +++++e++++G L +f+
   KHJ35010.1  57 IQKYFSEGGFAHVYLVKMP--KPIDGTDIAILKRVAVPDKEHLASMRTEVETMKKLkGHRHIVTYYDSHAsqlkgG--GyeVFLLMEFCNEGGLINFM 150
                  5677889********9999..55556666664444677777799************99********9888544333..155***************** PP

                  HHTCTTTSBHHHHHHHHHHHHHHHHHHH..HTTEEEST-SGGGEEEEE...TTEEEE-STTTHEETTTSSEE.......EETTSSTSGGGGS-HHHHH CS
  Pkinase_Tyr  93 rkkekekltlkdllsfalqvAkGmeyLe..skklvHrdlaarNvLlse...nkvvkisDfGLardiekddey.......vkkeeaklpvkWmapEslk 178
                  +++ +++lt  ++l++  +vA G++ ++  +  l+Hrdl   N+L+++   +++ k++DfG +   +   ++       +++ ++++ +++ +pE+++
   KHJ35010.1 151 NTRLQNRLTEPEILNIFSDVAVGVACMHylKPPLLHRDLKVENILITTkggKRKFKLCDFGSTAPPQPAGSTsaecrsiEEDIQKHTTLQYRSPEMVD 248
                  *********************9966555113469*************977778********987654333322233344666778899********98 PP

                  HSE...EEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHH CS
  Pkinase_Tyr 179 ekk...ftsksDvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselv 256
                    +   + +ksD+W+ Gvll+ ++ +  +p++       l+ l+++   +     +++l+ l+++ ++e p+ Rp++ +++
   KHJ35010.1 249 VYRkypIDEKSDIWALGVLLYKLCFY-TTPFEAQG---QLAILNASFTFPDYPIFSDRLKALIRSMLREPPKLRPNIYQVL 325
                  7776779****************994.57776554...4556778888999999999999999999999999999998876 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   3.5e-07    0.0016      58     170 ..     100     214 ..      80     225 .. 0.83

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 3.5e-07
         Kdo  58 avrEfrllkrLeeagvavpkpvaagavkvgleyrAlllterlegaqdLedllakwae.laeelkrallkavgrliaklhrag..vnHadlyaknillqq 153
                 ++ E++ +k+L+     v +    + + +g++y  +ll+e  ++   ++ + ++ ++ l e    +++ +v+  +a +h ++  + H+dl + nil+ +
  KHJ35010.1 100 MRTEVETMKKLKGHRHIVTYYDSHASQLKGGGYEVFLLMEFCNEGGLINFMNTRLQNrLTEPEILNIFSDVAVGVACMHYLKppLLHRDLKVENILITT 198
                 45699999999999999999989999999999*******98887666665555545567777778999***********9875589************* PP

         Kdo 154 eeeeeaeiwliDldkar 170
                 ++ +++++ l D+  ++
  KHJ35010.1 199 KG-GKRKFKLCDFGSTA 214
                 *8.*********97665 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   2.2e-05     0.098     227     284 ..     255     314 ..     174     318 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.2e-05
  Kinase-like 227 mthkldaWqlGlviyriwclklPltlateea..keewkfklckkipekvkaLlkkfLqls 284
                  +  k d W+lG+  y +   + P++ + ++a  + ++ f      ++ +kaL++ +L+ +
   KHJ35010.1 255 IDEKSDIWALGVLLYKLCFYTTPFEAQGQLAilNASFTFPDYPIFSDRLKALIRSMLREP 314
                  45578*******************999888722566777788899************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (603 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       428  (0.0238719); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.22s 00:00:00.81 Elapsed: 00:00:00.40
# Mc/sec: 4503.53
//
Query:       KHJ35011.1  [L=1009]
Description: putative peptidase family m28 family [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.4e-35  121.5   0.0    5.5e-35  120.9   0.0    1.3  1  Peptidase_M28  Peptidase family M28
    0.00014   21.6   0.0    0.00025   20.8   0.0    1.3  1  Peptidase_M20  Peptidase family M20/M25/M40


Domain annotation for each model (and alignments):
>> Peptidase_M28  Peptidase family M28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.9   0.0   6.1e-39   5.5e-35      12     194 ..     196     369 ..     189     373 .. 0.94

  Alignments for each domain:
  == domain 1  score: 120.9 bits;  conditional E-value: 6.1e-39
                    SEEEEEEEE--B-TTTTCCT---TTTTHHHHHHHHHHHHHCHHGGCCSSEEEEEEEESSCSGSSHHHHHHHHHHCCCTTEEEEEEECS-SSSS--E CS
  Peptidase_M28  12 devlllgAHyDsvgvgrgpifvGAdDnAsgvaalLelarvlaasgsrpkrgvrflffdaEEagllGSkafakakpelkkiaavlnlDmvgsggkel 107
                       +l++AH+Dsv++  g    G +D+++gv + L+l+++++ +g++p+rg+++lf++ EE gl+GSkaf   +p ++ ++++lnl+ +g+gg++ 
     KHJ35011.1 196 RAGVLVNAHLDSVST--GY---GTTDDGVGVITALQLLKFFTIKGNEPERGLILLFNNNEEDGLYGSKAFL-PHPMASFVNTFLNLEGAGAGGRAN 285
                    4579***********..**...*************************************************.************************ PP

                    EEHHHHHHCHHHHHHHHHHHHHTT-TTSCCEEEEESSTT-STTHHHHTTT--EEEECTSSS-TTTTSTTSSGGGB-HHHHHHHHHHH CS
  Peptidase_M28 108 lfesgdkssselekelkalakpvgraaaedpfdersgrgrsDhspflkagvpvldlaetgfpevyHtprDtldnidkdtlariaelv 194
                    lf    +++ e+++ + ++ +p+g+ +  d+f  +++r+++D+++f+++g  +ld+a+   +++yHt +D++++   ++++++  + 
     KHJ35011.1 286 LF---RSTDLEVTRAYAHSPNPFGNVIGADAFSLKFIRSDTDYTIFRAEGYSGLDVAFYVPRSRYHTDEDDIKHTTINSVWHMLSAS 369
                    *9...6667789999999**************************************************************9997765 PP

>> Peptidase_M20  Peptidase family M20/M25/M40
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   0.0   2.8e-08   0.00025      31      83 ..     210     262 ..     200     384 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 2.8e-08
                    ESTTTTTTHHHHHHHHHHHHHHHHHTTT-SSEEEEEEESTTSSTTTHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_M20  31 yGrGaddmkggvlaalealralkdegikpkgtivllfqpdEEggrgGakalle 83 
                     G G++d+  gv++al++l+ +  +g +p++ + llf  +EE g  G+ka+l 
     KHJ35011.1 210 TGYGTTDDGVGVITALQLLKFFTIKGNEPERGLILLFNNNEEDGLYGSKAFLP 262
                    47899*************************************877*****998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1009 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       917  (0.0511462); expected 358.6 (0.02)
Passed bias filter:                      464  (0.0258799); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.75u 0.31s 00:00:01.06 Elapsed: 00:00:00.46
# Mc/sec: 6652.22
//
Query:       KHJ35012.1  [L=647]
Description: putative scf e3 ubiquitin ligase complex f-box protein grra [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.6e-12   45.7  30.5        1.2    9.4   0.0   12.5 13  LRR_6       Leucine Rich repeat
    6.8e-12   45.1   0.3      2e-11   43.6   0.3    1.9  1  F-box-like  F-box-like
    1.2e-09   38.2  27.7       0.29   11.6   0.8    7.8  8  LRR_4       Leucine Rich repeats (2 copies)
  ------ inclusion threshold ------
      0.024   14.5   0.3       0.08   12.9   0.3    2.0  1  F-box       F-box domain
        3.2    8.7  23.8         40    5.3   0.4    9.2 11  LRR_1       Leucine Rich Repeat


Domain annotation for each model (and alignments):
>> LRR_6  Leucine Rich repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.4    0.0032        11       2      23 ..     168     190 ..     167     191 .. 0.91
   2 ?   -0.0   0.0      0.35   1.2e+03       2      12 ..     194     204 ..     193     204 .. 0.88
   3 ?    3.3   0.1     0.029     1e+02       1      21 [.     219     240 ..     219     243 .. 0.83
   4 !    6.0   0.0    0.0039        14       1      23 [.     245     268 ..     245     269 .. 0.88
   5 ?    2.6   0.0     0.049   1.8e+02       1      23 [.     271     294 ..     271     295 .. 0.86
   6 !    5.1   0.1    0.0078        28       4      17 ..     300     314 ..     297     316 .. 0.90
   7 !    9.4   0.0   0.00034       1.2       4      22 ..     328     347 ..     327     348 .. 0.89
   8 ?   -3.1   0.0       3.4   1.2e+04       5      23 ..     355     374 ..     353     375 .. 0.74
   9 !    6.4   0.1     0.003        11       4      19 ..     380     396 ..     379     401 .. 0.85
  10 !    8.8   0.1   0.00052       1.9       2      24 .]     404     427 ..     403     427 .. 0.94
  11 ?    3.7   0.0     0.023        81       3      24 .]     430     452 ..     428     452 .. 0.89
  12 ?    0.8   0.1      0.18   6.6e+02       3      14 ..     499     510 ..     497     519 .. 0.85
  13 ?    3.2   0.2     0.032   1.2e+02       1      12 [.     523     534 ..     523     534 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0032
       LRR_6   2 nthLteLdLsgNd.IgDeGaeaL 23 
                 ++ ++ L L+ ++ ++D G+++L
  KHJ35012.1 168 CNRVERLTLTNCEgLSDNGLMSL 190
                 778999***************98 PP

  == domain 2  score: -0.0 bits;  conditional E-value: 0.35
       LRR_6   2 nthLteLdLsg 12 
                 +++L +Ld+sg
  KHJ35012.1 194 SSNLLALDISG 204
                 689******96 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.029
       LRR_6   1 snthLteLdLsgNd.IgDeGae 21 
                 +++ L+ L+++g++ I+ + ++
  KHJ35012.1 219 NCSRLQGLNITGCNrISSASMM 240
                 5889999*******99988776 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.0039
       LRR_6   1 snthLteLdLsgNd.IgDeGaeaL 23 
                 ++++++ L L+++d ++D+ ++ +
  KHJ35012.1 245 KCRNIKRLKLNDCDqLDDAAVIEF 268
                 599***************988765 PP

  == domain 5  score: 2.6 bits;  conditional E-value: 0.049
       LRR_6   1 snthLteLdLsgNd.IgDeGaeaL 23 
                 +++++ e dL  ++ IgDe ++aL
  KHJ35012.1 271 KCPNMLEIDLHQCKgIGDEPVTAL 294
                 58999*************966665 PP

  == domain 6  score: 5.1 bits;  conditional E-value: 0.0078
       LRR_6   4 hLteLdLsgNd.IgD 17 
                 +L+eL L+ +d I+D
  KHJ35012.1 300 SLRELRLANCDlISD 314
                 8**********9998 PP

  == domain 7  score: 9.4 bits;  conditional E-value: 0.00034
       LRR_6   4 hLteLdLsgNd.IgDeGaea 22 
                 hL+ LdL+++  ++D  + +
  KHJ35012.1 328 HLRILDLTFCTrLTDRAVVK 347
                 9*************987776 PP

  == domain 8  score: -3.1 bits;  conditional E-value: 3.4
       LRR_6   5 LteLdLsgNd.IgDeGaeaL 23 
                 L+ L  + +  ++D  + a+
  KHJ35012.1 355 LRNLVFAKCRqLTDTAVNAI 374
                 78888888888999876665 PP

  == domain 9  score: 6.4 bits;  conditional E-value: 0.003
       LRR_6   4 hLteLdLsgNd.IgDeG 19 
                 +L +L+L +++ I+D  
  KHJ35012.1 380 NLHYLHLGHCGqITDNA 396
                 799************75 PP

  == domain 10  score: 8.8 bits;  conditional E-value: 0.00052
       LRR_6   2 nthLteLdLsgNd.IgDeGaeaLa 24 
                 ++ +++ dL ++  ++D  +++La
  KHJ35012.1 404 CNRIRYIDLGCCTnLTDTSVIKLA 427
                 8899******************98 PP

  == domain 11  score: 3.7 bits;  conditional E-value: 0.023
       LRR_6   3 thLteLdLsgNd.IgDeGaeaLa 24 
                 ++L+   L  +  I+D+ ++aLa
  KHJ35012.1 430 PKLRRIGLVKCSsITDSSVIALA 452
                 6899999999999*********8 PP

  == domain 12  score: 0.8 bits;  conditional E-value: 0.18
       LRR_6   3 thLteLdLsgNd 14 
                 ++L+ ++Ls++ 
  KHJ35012.1 499 SSLERVHLSYCT 510
                 799*******97 PP

  == domain 13  score: 3.2 bits;  conditional E-value: 0.032
       LRR_6   1 snthLteLdLsg 12 
                 ++++Lt+L+L+g
  KHJ35012.1 523 HCQKLTHLSLTG 534
                 79********86 PP

>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.6   0.3   5.5e-15     2e-11       3      46 ..      76     118 ..      74     120 .. 0.92

  Alignments for each domain:
  == domain 1  score: 43.6 bits;  conditional E-value: 5.5e-15
  F-box-like   3 rLPdEiLlqIFsyL.ppsdLlrlalVCrrWrrvaldtplLWrrlv 46 
                  LP E+L+  Fs L +p+dLl++++V+++W+r + d  lLW+r+ 
  KHJ35012.1  76 KLPAEVLISMFSKLsDPQDLLNCMRVSKKWARNCVD--LLWHRPA 118
                 7*************99*****************954..9****85 PP

>> LRR_4  Leucine Rich repeats (2 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   1.6    0.0078        28       8      37 ..     182     209 ..     170     218 .. 0.84
   2 !    8.1   0.6     0.001       3.6       2      38 ..     196     236 ..     195     239 .. 0.83
   3 !    7.0   0.4    0.0023       8.2       2      38 ..     222     262 ..     216     265 .. 0.78
   4 !    7.3   0.0    0.0018       6.6       2      36 ..     248     286 ..     247     295 .. 0.81
   5 !   11.6   0.8     8e-05      0.29       1      38 [.     299     342 ..     299     342 .. 0.77
   6 !    8.7   0.1   0.00066       2.4       1      38 [.     353     394 ..     353     399 .. 0.80
   7 !    6.6   0.0    0.0031        11       3      38 ..     407     445 ..     399     450 .. 0.81
   8 !    7.1   0.8    0.0022       7.7       2      32 ..     500     534 ..     499     545 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0078
                 --SS---E-S-HHH-TT--EEE-.-S---- CS
       LRR_4   8 LsnNqltdiplleklpnLkeLdLsgNnlit 37 
                 Ls+N l +  ll++  nL  Ld+sg ++it
  KHJ35012.1 182 LSDNGLMS--LLNGSSNLLALDISGDSQIT 209
                 67778888..7999***********99995 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.001
                 S--EEE--.SS---E-S-..HHH.-TT--EEE-.-S----- CS
       LRR_4   2 nLevLdLs.nNqltdipl..lek.lpnLkeLdLsgNnlitd 38 
                 nL  Ld+s + q+t+ +   l++ +  L+ L+++g+n+i++
  KHJ35012.1 196 NLLALDISgDSQITERSMevLANnCSRLQGLNITGCNRISS 236
                 788899998789998777886655**************976 PP

  == domain 3  score: 7.0 bits;  conditional E-value: 0.0023
                 S--EEE--.SS---E-S-.HH..H-TT--EEE-.-S----- CS
       LRR_4   2 nLevLdLs.nNqltdipl.le..klpnLkeLdLsgNnlitd 38 
                 +L+ L++   N++++ +  l   k+ n k L L+++ +++d
  KHJ35012.1 222 RLQGLNITgCNRISSASMmLVaeKCRNIKRLKLNDCDQLDD 262
                 68888888557999988894444899999999988877765 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.0018
                 S--EEE--SS.---E-S-..HHH.-TT--EEE-.-S--- CS
       LRR_4   2 nLevLdLsnN.qltdipl..lek.lpnLkeLdLsgNnli 36 
                 n + L L+++ ql d     ++k +pn+ e+dL+++  i
  KHJ35012.1 248 NIKRLKLNDCdQLDDAAVieFSKkCPNMLEIDLHQCKGI 286
                 788999999999999888565555*********888666 PP

  == domain 5  score: 11.6 bits;  conditional E-value: 8e-05
                 SS--EEE--SS.---E-S-HHH-TT......--EEE-.-S----- CS
       LRR_4   1 pnLevLdLsnN.qltdiplleklpn......LkeLdLsgNnlitd 38 
                 ++L++L L+n+  ++d  +l+ lp+      L+ LdL++++++td
  KHJ35012.1 299 KSLRELRLANCdLISDSAFLS-LPSnklyehLRILDLTFCTRLTD 342
                 68*********6677877766.444444446******99988876 PP

  == domain 6  score: 8.7 bits;  conditional E-value: 0.00066
                 SS--EEE--SS.---E-S-..HHH.-TT--EEE-.-S----- CS
       LRR_4   1 pnLevLdLsnN.qltdipl..lek.lpnLkeLdLsgNnlitd 38 
                 p+L++L ++ + qltd     ++k  +nL++L+L ++ +itd
  KHJ35012.1 353 PRLRNLVFAKCrQLTDTAVnaISKlGKNLHYLHLGHCGQITD 394
                 6899999999977997555676677799******88988876 PP

  == domain 7  score: 6.6 bits;  conditional E-value: 0.0031
                 --EEE--.SS---E-S-..HHH-TT--EEE-.-S----- CS
       LRR_4   3 LevLdLs.nNqltdipl..leklpnLkeLdLsgNnlitd 38 
                  +++dL+  ++ltd +   l++lp+L+ + L  ++ itd
  KHJ35012.1 407 IRYIDLGcCTNLTDTSVikLASLPKLRRIGLVKCSSITD 445
                 58899995569**999977779*****999877766665 PP

  == domain 8  score: 7.1 bits;  conditional E-value: 0.0022
                 S--EEE--SS.---E-S-....HHH-TT--EEE-.- CS
       LRR_4   2 nLevLdLsnN.qltdipl....leklpnLkeLdLsg 32 
                 +Le ++Ls +  lt +++    l+ + +L++L+L+g
  KHJ35012.1 500 SLERVHLSYCtSLT-LNSiiylLNHCQKLTHLSLTG 534
                 7999****754788.5555665667*********76 PP

>> F-box  F-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.3   2.2e-05      0.08      19      35 ..      91     107 ..      75     123 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 2.2e-05
                 -HHHHHHHCTT-HHHHH CS
       F-box  19 plsdllalrrVSkgwri 35 
                 ++ dll+++rVSk+w +
  KHJ35012.1  91 DPQDLLNCMRVSKKWAR 107
                 4566***********76 PP

>> LRR_1  Leucine Rich Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.59   2.1e+03       3      20 ..     172     187 ..     170     195 .. 0.74
   2 ?   -2.1   0.0         3   1.1e+04       1      14 [.     196     207 ..     196     216 .. 0.71
   3 ?    1.9   0.0      0.15   5.4e+02       1      13 [.     222     234 ..     222     240 .. 0.78
   4 ?   -1.5   0.0       1.9   6.8e+03       1      11 [.     248     258 ..     248     267 .. 0.83
   5 ?   -3.0   0.0         5   1.8e+04       4      15 ..     277     288 ..     276     292 .. 0.77
   6 ?    5.3   0.4     0.011        40       1      13 [.     300     318 ..     300     325 .. 0.70
   7 ?    2.9   0.0      0.07   2.5e+02       1      11 [.     328     338 ..     328     349 .. 0.82
   8 ?    5.0   0.1     0.015        52       1      23 []     380     400 ..     380     400 .. 0.90
   9 ?   -1.0   0.0       1.3   4.8e+03       2      12 ..     407     417 ..     406     430 .. 0.79
  10 ?    0.6   0.2       0.4   1.4e+03       1      18 [.     500     515 ..     500     527 .. 0.73
  11 ?   -1.8   0.0       2.5     9e+03       1       9 [.     526     534 ..     526     536 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.59
       LRR_1   3 rhLdLsnnpllglppnsf 20 
                 ++L L+n+   gl++n +
  KHJ35012.1 172 ERLTLTNCE--GLSDNGL 187
                 789999999..5666554 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 3
       LRR_1   1 nLrhLdLsnnpllg 14 
                 nL  Ld+s+ +  +
  KHJ35012.1 196 NLLALDISGDS--Q 207
                 67789**9977..4 PP

  == domain 3  score: 1.9 bits;  conditional E-value: 0.15
       LRR_1   1 nLrhLdLsnnpll 13 
                 +L+ L++++++ +
  KHJ35012.1 222 RLQGLNITGCNRI 234
                 5888******963 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 1.9
       LRR_1   1 nLrhLdLsnnp 11 
                 n ++L L+++ 
  KHJ35012.1 248 NIKRLKLNDCD 258
                 7899****997 PP

  == domain 5  score: -3.0 bits;  conditional E-value: 5
       LRR_1   4 hLdLsnnpllgl 15 
                 ++dL ++ ++g 
  KHJ35012.1 277 EIDLHQCKGIGD 288
                 589999997665 PP

  == domain 6  score: 5.3 bits;  conditional E-value: 0.011
       LRR_1   1 nLrhLdLsnnpl......l 13 
                 +Lr+L L n+ l      l
  KHJ35012.1 300 SLRELRLANCDLisdsafL 318
                 69*********93333333 PP

  == domain 7  score: 2.9 bits;  conditional E-value: 0.07
       LRR_1   1 nLrhLdLsnnp 11 
                 +Lr LdL+ + 
  KHJ35012.1 328 HLRILDLTFCT 338
                 69*******97 PP

  == domain 8  score: 5.0 bits;  conditional E-value: 0.015
       LRR_1   1 nLrhLdLsnnpllglppnsfqnL 23 
                 nL +L+L+++   ++++n++ nL
  KHJ35012.1 380 NLHYLHLGHCG--QITDNAIVNL 400
                 8**********..9999998876 PP

  == domain 9  score: -1.0 bits;  conditional E-value: 1.3
       LRR_1   2 LrhLdLsnnpl 12 
                  r++dL+ + +
  KHJ35012.1 407 IRYIDLGCCTN 417
                 699***99976 PP

  == domain 10  score: 0.6 bits;  conditional E-value: 0.4
       LRR_1   1 nLrhLdLsnnpllglppn 18 
                 +L++ +Ls++    l+ n
  KHJ35012.1 500 SLERVHLSYCTS--LTLN 515
                 69999***9984..4444 PP

  == domain 11  score: -1.8 bits;  conditional E-value: 2.5
       LRR_1   1 nLrhLdLsn 9  
                 +L+hL L++
  KHJ35012.1 526 KLTHLSLTG 534
                 79***9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (647 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       558  (0.0311228); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4372.15
//
Query:       KHJ35013.1  [L=1030]
Description: putative transcription factor utp21 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-75  253.9   0.0      2e-75  253.3   0.0    1.2  1  Utp21         Utp21 specific WD40 associated putative domain
      3e-14   53.1   0.0      0.079   13.3   0.0    6.2  5  ANAPC4_WD40   Anaphase-promoting complex subunit 4 WD40 domai
    3.6e-12   46.6  33.2    0.00014   22.6   2.6   10.2 10  WD40          WD domain, G-beta repeat
     0.0065   16.0   0.0      0.095   12.2   0.0    2.4  2  HPS3_N        Hermansky-Pudlak syndrome 3
  ------ inclusion threshold ------
       0.14   12.2   0.6       0.43   10.6   0.6    1.8  1  P_proprotein  Proprotein convertase P-domain
       0.15   10.6   0.0       0.27    9.7   0.0    1.3  1  Cytochrom_D1  Cytochrome D1 heme domain
       0.21   10.6   0.1        2.2    7.3   0.0    2.4  2  VID27         VID27 C-terminal WD40-like domain


Domain annotation for each model (and alignments):
>> Utp21  Utp21 specific WD40 associated putative domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  253.3   0.0   7.8e-79     2e-75      16     233 .]     825    1028 ..     815    1028 .. 0.96

  Alignments for each domain:
  == domain 1  score: 253.3 bits;  conditional E-value: 7.8e-79
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX-HHHHHHHHTT------.------ CS
       Utp21   16 vkspsseqlsedLiTLSlvpksrwqtLlnLDlIKeRnkPkeapkkpekaPFFLptlaglegkfasekedeeseedeeeeeeeesrilkldklgtese 112 
                  v+s+  +qls+dL TLS++pksrwq+Ll LD+IK+RnkP+e+pk+pekaPFFLp+l+    +++ +       e+++e+++e+sri +l +l+te e
  KHJ35013.1  825 VSSY--DQLSKDLQTLSILPKSRWQNLLYLDVIKARNKPIEPPKVPEKAPFFLPSLERPLAQKKLD-------EEARESNTEKSRIIRLGHLTTEGE 912 
                  4445..**************************************************9988887766.......788999999********9****** PP

                  HHHHHHHHHHSS--HHHHHHHHH-S-HHHHHT--------S-SHHHHHHHHHHHHHTTTS-HHHHHHHHHHHHHHTTTTTTT-SH..HHHHHHHHHH CS
       Utp21  113 ftklLeegsetgdysefleyLkslspsaidleirsLesaesleelvafvkaltarLksrrdfeLvqailsvfLkvHgdviaeeeeeelkealeelke 209 
                  ft++L+ g+etg+y +fl+yLk+lsps +dleirsL   ++ ee+v f+ alt++L++r d+eL+q+++svfL++H d+i+++++  + eal+ ++e
  KHJ35013.1  913 FTSTLRVGYETGNYVSFLNYLKTLSPSVADLEIRSL---NPQEEFVPFITALTHQLHARLDYELIQTWMSVFLRLHSDLITHDHK--IIEALKIWRE 1004
                  ************************************...999******************************************8..********** PP

                  HHHHHHHHHHHHHHHHHHHHHHHT CS
       Utp21  210 eqeeewerldelvkyclgvvgflr 233 
                  eq++e +r+ el++yc+gvvgflr
  KHJ35013.1 1005 EQAREGQRIGELLSYCSGVVGFLR 1028
                  **********************98 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.3   0.0   3.1e-05     0.079      25      90 ..     214     279 ..     198     281 .. 0.82
   2 !    5.6   0.0    0.0074        19      34      74 ..     536     576 ..     522     589 .. 0.85
   3 ?   -0.2   0.0       0.5   1.3e+03      35      72 ..     615     652 ..     604     662 .. 0.84
   4 !   13.3   0.0   3.1e-05     0.079      40      75 ..     663     698 ..     656     704 .. 0.92
   5 !   10.4   0.0   0.00025      0.64      38      84 ..     703     749 ..     698     757 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.1e-05
  ANAPC4_WD40  25 ngqrvwtleedk.edsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  +g+ ++t++ +  + + ++++++ p  +l+a+ays+g + +++++  k++ +l+ +s+  +t++++ 
   KHJ35013.1 214 SGKLIYTIPPPVpKCGAITAIQFTPALSLIAIAYSEGPLIIHNVKIDKTIIHLDGGSS-VITSISFR 279
                  56778888554405578************************************99999.59998875 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.0074
  ANAPC4_WD40  34 edkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvh 74 
                  e++++s+v+s+  +  g++ +++ ++g++ +++ +sg    
   KHJ35013.1 536 ETGDGSNVKSVTISSCGTFAVIGSEKGHIDMFNLQSGLHRC 576
                  56899****************************99996555 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.5
  ANAPC4_WD40  35 dkedsevrsLaWkpdgklLavaysdgevrlldaesgkv 72 
                   k++s v++La    +k +     dg+v++ +  +g +
   KHJ35013.1 615 GKHKSAVTGLAVDSLNKTIISCSLDGKVKFWNFLTGCL 652
                  688999**********************9998877765 PP

  == domain 4  score: 13.3 bits;  conditional E-value: 3.1e-05
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrlldaesgkvvhs 75 
                   +++L++ p+  l+a+a++d  +r++d+e+++++++
   KHJ35013.1 663 AIKGLRFYPSSDLIAIACQDLCIRIIDIETKNTIRE 698
                  699****************************99976 PP

  == domain 5  score: 10.4 bits;  conditional E-value: 0.00025
  ANAPC4_WD40  38 dsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekav 84 
                  ++++++ ++++dg+ +  a sd  +r+ d  +g+++  +++k++++ 
   KHJ35013.1 703 QGSINDWCFSNDGRWIIAASSDCVIRVWDLPTGNLIDGFRTKNQSTA 749
                  5789999*********************************9998744 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.3       1.6   4.2e+03      22      38 .]     147     162 ..     143     162 .. 0.85
   2 ?    4.3   0.0     0.032        81      24      38 .]     197     211 ..     173     211 .. 0.70
   3 ?    0.3   0.1       0.6   1.5e+03       6      38 .]     265     309 ..     260     309 .. 0.56
   4 ?    3.3   0.0     0.066   1.7e+02      13      37 ..     338     362 ..     316     362 .. 0.84
   5 ?    3.6   0.2     0.055   1.4e+02      21      37 ..     402     418 ..     376     419 .. 0.82
   6 ?    3.0   0.1     0.082   2.1e+02      10      34 ..     539     564 ..     532     568 .. 0.82
   7 !   17.8   0.1   1.7e-06    0.0044       7      38 .]     614     646 ..     606     646 .. 0.85
   8 ?    4.4   0.1      0.03        76      13      38 .]     664     689 ..     654     689 .. 0.80
   9 !   22.6   2.6   5.5e-08   0.00014       9      38 .]     701     731 ..     693     731 .. 0.80
  10 ?    0.3   0.0      0.61   1.6e+03      14      32 ..     748     765 ..     741     773 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.6
                 SSEEEEEETTSEEEEEE CS
        WD40  22 gawlasGsdDgtvriWd 38 
                 g+w++ Gs    + +W+
  KHJ35013.1 147 GSWIV-GSCSTRIEVWS 162
                 89*98.87799999995 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.032
                 EEEEEETTSEEEEEE CS
        WD40  24 wlasGsdDgtvriWd 38 
                  ++ G +Dg + iW+
  KHJ35013.1 197 KIFVGRKDGCIEIWN 211
                 3456999*******8 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 0.6
                 EEESSSS.EEEEEEETTSSE..........EE.EE.ETTSEEEEEE CS
        WD40   6 tltGHss.vtslafspdgaw..........la.sG.sdDgtvriWd 38 
                 +l+G ss +ts++f  d+            +a sG s +g v +Wd
  KHJ35013.1 265 HLDGGSSvITSISFRTDNLGagedgrkpgvMAtSGpS-NGDVTFWD 309
                 5665555569886444433355555556643315567.88888887 PP

  == domain 4  score: 3.3 bits;  conditional E-value: 0.066
                 EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriW 37 
                  t ++f p+++ l+s + D++++ W
  KHJ35013.1 338 LTKIQFLPSQPVLVSNGLDNSLKCW 362
                 68899********98688******9 PP

  == domain 5  score: 3.6 bits;  conditional E-value: 0.055
                 TSSEEE.EEETTSEEEEE CS
        WD40  21 dgawla.sGsdDgtvriW 37 
                  g+wl+ sGs D+++  W
  KHJ35013.1 402 GGKWLLsSGS-DRSLWAW 418
                 5899872556.**99777 PP

  == domain 6  score: 3.0 bits;  conditional E-value: 0.082
                 S.SSEEEEEEETTSSEEEEEETTSEE CS
        WD40  10 H.ssvtslafspdgawlasGsdDgtv 34 
                   s+v s+  s+ g++ + Gs++g++
  KHJ35013.1 539 DgSNVKSVTISSCGTFAVIGSEKGHI 564
                 434699999*******999****998 PP

  == domain 7  score: 17.8 bits;  conditional E-value: 1.7e-06
                 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 l  H s vt+la+++ ++ ++s+s Dg+v++W+
  KHJ35013.1 614 LGKHkSAVTGLAVDSLNKTIISCSLDGKVKFWN 646
                 4569666*************************8 PP

  == domain 8  score: 4.4 bits;  conditional E-value: 0.03
                 EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40  13 vtslafspdgawlasGsdDgtvriWd 38 
                 + +l+f p+++++a ++ D  +ri d
  KHJ35013.1 664 IKGLRFYPSSDLIAIACQDLCIRIID 689
                 45566*********9999****9965 PP

  == domain 9  score: 22.6 bits;  conditional E-value: 5.5e-08
                 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 G  +s+++ +fs dg+w++++s D+ +r+Wd
  KHJ35013.1 701 GCqGSINDWCFSNDGRWIIAASSDCVIRVWD 731
                 44466************987777*******9 PP

  == domain 10  score: 0.3 bits;  conditional E-value: 0.61
                 EEEEEETTSSEEEEEETTS CS
        WD40  14 tslafspdgawlasGsdDg 32 
                 t+la s+ g +la+ s +g
  KHJ35013.1 748 TALAISSTGEFLATTS-KG 765
                 78999********988.55 PP

>> HPS3_N  Hermansky-Pudlak syndrome 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0      0.12     3e+02      28      46 ..     196     214 ..     188     236 .. 0.82
   2 !   12.2   0.0   3.7e-05     0.095      18      76 ..     704     762 ..     670     770 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.12
      HPS3_N  28 dkLlvatesgcvevydlee 46 
                 +k++v+ ++gc+e++++++
  KHJ35013.1 196 NKIFVGRKDGCIEIWNVRS 214
                 68**************974 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 3.7e-05
      HPS3_N  18 qeptavcaagdk.Llvatesgc.vevydleeeeckvlcrfstvdkvlkiaysesGdyvatl 76 
                   +++ c+++d   ++a++s+c + v+dl  +  +++  f t ++ +++a s++G+++at 
  KHJ35013.1 704 GSINDWCFSNDGrWIIAASSDCvIRVWDL--PTGNLIDGFRTKNQSTALAISSTGEFLATT 762
                 5677899999666888888888799***9..6888999*********************96 PP

>> P_proprotein  Proprotein convertase P-domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.6   0.00017      0.43      43      78 ..     512     547 ..     490     552 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00017
                   S-EEEEEEEESTTTTS---EEEEEEEEESSTT--EE CS
  P_proprotein  43 sgfldwtfmsthlwgeraeGeWkLevkdseeedtgt 78 
                   +g +d++f  t +wg + +G+W Le  d ++ +  t
    KHJ35013.1 512 TGHKDEKFARTWFWGRKKAGRWVLETGDGSNVKSVT 547
                   78999*********************9966555555 PP

>> Cytochrom_D1  Cytochrome D1 heme domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00011      0.27      15     108 ..     683     776 ..     672     800 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00011
                   TEEEEEETTT-SEEEEEE-STTEEEEEE-TT.SSEEEEEETTSEEEEEESSSSSEEEEEE-SSEEEEEEE--TTSEEEEEEEETTEEEEEETTT CS
  Cytochrom_D1  15 gkvalldgdskeilavletgyalHisrvfasdgRyvyvigRDgkvtliDLwakeivaevkiGlnarsvavSqddryvivgnYlPgqlvildaet 108
                     ++++d ++k+++  l +         f++dgR++  ++ D  + + DL + + +   +   ++  +a+S  + ++++ +    ++ i + +t
    KHJ35013.1 683 LCIRIIDIETKNTIRELWGCQGSINDWCFSNDGRWIIAASSDCVIRVWDLPTGNLIDGFRTKNQSTALAISSTGEFLATTSKGELGINIWNNKT 776
                   4689999999999999988888888899********************************************9999988766555555555555 PP

>> VID27  VID27 C-terminal WD40-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.18   4.6e+02     151     174 ..     544     568 ..     539     585 .. 0.78
   2 ?    7.3   0.0   0.00084       2.2     160     212 ..     675     727 ..     671     736 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.18
       VID27 151 savattekGyiav.asekGdirlfd 174
                  +v+    G+ av +sekG i +f+
  KHJ35013.1 544 KSVTISSCGTFAViGSEKGHIDMFN 568
                 566677778887549*********8 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.00084
       VID27 160 yiavasekGdirlfdrlginaktalPalgdpiigldvsadGrwvlatcktyll 212
                  ia+a +   ir+ d   +n   +l     +i   + s+dGrw++a++++ ++
  KHJ35013.1 675 LIAIACQDLCIRIIDIETKNTIRELWGCQGSINDWCFSNDGRWIIAASSDCVI 727
                 6999999999*****99999999***********************9887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1030 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      377  (0.0210274); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.72u 0.28s 00:00:01.00 Elapsed: 00:00:00.44
# Mc/sec: 7093.33
//
Query:       KHJ35014.1  [L=294]
Description: hypothetical protein EV44_g2811 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (294 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       879  (0.0490267); expected 358.6 (0.02)
Passed bias filter:                      372  (0.0207485); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2172.85
//
Query:       KHJ35015.1  [L=726]
Description: putative glyoxal oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-39  135.2   0.0    6.9e-39  133.5   0.0    2.0  1  Glyoxal_oxid_N  Glyoxal oxidase N-terminus
    7.7e-24   83.8   0.0    1.5e-23   82.9   0.0    1.5  1  DUF1929         Domain of unknown function (DUF1929)
    6.2e-13   49.0  45.8    2.8e-06   27.7  20.6    2.6  2  Chitin_bind_1   Chitin recognition protein
  ------ inclusion threshold ------
       0.19   12.4   0.0         45    4.8   0.0    2.7  2  FecR            FecR protein


Domain annotation for each model (and alignments):
>> Glyoxal_oxid_N  Glyoxal oxidase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.5   0.0   1.5e-42   6.9e-39      41     240 .]     249     472 ..     224     472 .. 0.85

  Alignments for each domain:
  == domain 1  score: 133.5 bits;  conditional E-value: 1.5e-42
  Glyoxal_oxid_N  41 kkdCtaHsveydvatnavrplkvltdtwcssgalladGtlvqtGGfk..........dgerkvrllspc......eecdwvelke.elaekRwya 118
                     k   +a s e++ ++ +  +l+ +t+++cs ga+ladG++++ GG +          dg r++r+l  +      +   w+e k+ +l++ Rwy 
      KHJ35015.1 249 KDGEYAMSAEFNPKSGRPVALSYSTNAFCSGGAFLADGRVISVGGNApldfinpkigDGFRAIRTLYRSstnpylDGRPWEEPKSrKLSTARWYP 343
                     4445899**************************************6433333344449*******98876676665667**988779******** PP

  Glyoxal_oxid_N 119 tnqiLpdgrvivvGG...........rrafsyefvpkeekseekavelpfLketedkeennLYPfvhllpdgnlfifankrsilldykknkvvre 202
                     t q++pdg+v+v  G            ++ +ye++ ++++   k++el++L + +      +YPf+++lpd+nlfif  k++ ++++kknkv+++
      KHJ35015.1 344 TVQTMPDGSVFVASGslnglypenlkNNNPTYEMLDRKGNPWGKSYELDILVKNQ---PYYMYPFINVLPDSNLFIFVSKQAQVFNHKKNKVIKQ 435
                     ************9984444444443336789********************9876...579********************************** PP

  Glyoxal_oxid_N 203 fpklpggernyPssgssvlLplklkeeaseaevlvCGG 240
                     +p lpg+ r+yP++g svlLpl+  +++ +ae+++CGG
      KHJ35015.1 436 LPDLPGDYRTYPNTGGSVLLPLSS-ANNWKAEIVICGG 472
                     ***********************5.6799********9 PP

>> DUF1929  Domain of unknown function (DUF1929)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.9   0.0   3.3e-27   1.5e-23       1      96 []     623     725 ..     623     725 .. 0.87

  Alignments for each domain:
  == domain 1  score: 82.9 bits;  conditional E-value: 3.3e-27
     DUF1929   1 RPkissv.ptevkyg.etftvtvsvekeaeevkvslvrpgfvTHsvnmdqRlveLev...set...gytvtvtaPpnanvapPGyymlFvvndgvpSvg 91 
                 RP+  ++ ++++k + ++f +++ v++ a+++k++l++ gfvTHs++m++R+++L++   + +    ++v+v+ Ppn+n+apPG+y+l+vv+dg+pSvg
  KHJ35015.1 623 RPTKVKIsTKSLKADgSKFHISFYVSSGAKKLKIVLYHGGFVTHSLHMGHRMLYLDYtgfK-KgwrWQKVKVRGPPNNNLAPPGPYVLYVVVDGIPSVG 720
                 787777745556665599******999999**************************96651.1567899****************************** PP

     DUF1929  92 kwVkv 96 
                 ++ +v
  KHJ35015.1 721 QFLQV 725
                 *9876 PP

>> Chitin_bind_1  Chitin recognition protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.8  17.2   1.2e-09   5.2e-06       1      38 []      50      93 ..      50      93 .. 0.86
   2 !   27.7  20.6   6.3e-10   2.8e-06       2      38 .]     151     191 ..     150     191 .. 0.94

  Alignments for each domain:
  == domain 1  score: 26.8 bits;  conditional E-value: 1.2e-09
                   B-SGGCTT---....STT-EE-TTSBEEBSHHHH..STT--BS- CS
  Chitin_bind_1  1 eCGkqaggatC....plnvCCSqyGyCGttsdyC..gagCqsnC 38
                   +CGk+ ++  C      + CCS++G+CG+t ++C  ++gCqs+C
     KHJ35015.1 50 RCGKEFKDSICdansGYGGCCSSFGFCGSTINHClvERGCQSGC 93
                   6**********65433355***************88899***** PP

  == domain 2  score: 27.7 bits;  conditional E-value: 6.3e-10
                    -SGGCTT---...STT-EE-TTSBEEBSHHHHSTT--BS.- CS
  Chitin_bind_1   2 CGkqaggatC...plnvCCSqyGyCGttsdyCgagCqsn.C 38 
                    CG++++ + C    +++CCS yG+CG++s +CgagCqs+ C
     KHJ35015.1 151 CGSNNDLKICgnwFSGNCCSLYGFCGNSSSHCGAGCQSGnC 191
                    **********77777***********************988 PP

>> FecR  FecR protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.013        60      10      28 ..     510     528 ..     503     534 .. 0.85
   2 ?    4.8   0.0      0.01        45      52      93 ..     616     661 ..     613     662 .. 0.84

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.013
        FecR  10 raeilleDgsvvrlnenss 28 
                 ++ ill+Dg++++ln  s+
  KHJ35015.1 510 IEGILLPDGTTIWLNGGSK 528
                 56799**********9886 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.01
        FecR  52 dvakdkkrpfevktpsatigvrgtef....rvrksdkqtevavleG 93 
                 + +k kkrp +vk  + + ++ g++f     v ++ k++++ +++G
  KHJ35015.1 616 QGNKAKKRPTKVKISTKSLKADGSKFhisfYVSSGAKKLKIVLYHG 661
                 6678999*****************9987666788888888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (726 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.39
# Mc/sec: 5577.82
//
Query:       KHJ35016.1  [L=203]
Description: putative phosphoribosylaminoimidazole-succinocarboxamide synthase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-15   57.0   0.8      2e-15   57.0   0.8    1.7  2  DUF3433   Protein of unknown function (DUF3433)


Domain annotation for each model (and alignments):
>> DUF3433  Protein of unknown function (DUF3433)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.0   0.8   1.1e-19     2e-15      25      91 .]       3      70 ..       1      70 [. 0.96
   2 ?   -2.8   0.7      0.52   9.4e+03      77      85 ..      91      95 ..      82     106 .. 0.49

  Alignments for each domain:
  == domain 1  score: 57.0 bits;  conditional E-value: 1.1e-19
     DUF3433 25 vrrlaPFaaLah.rgataersllldyratlpflallralrnrhwlvalvslvtllsellpvlasglfy 91
                +r+l P+a+L++ +g+ta++sllldy+a lp+ + l+a+   h+++ +vsl+t ++ llp+++++lfy
  KHJ35016.1  3 LRILKPWAELSKsNGSTADNSLLLDYPAALPIHVSLSAFSAAHYRISIVSLLTTIFILLPIFSGNLFY 70
                799********55******************************************************7 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.52
     DUF3433 77 llsellpvl 85
                +    l+vl
  KHJ35016.1 91 F----LIVL 95
                1....1111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       662  (0.0369234); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1661.45
//
Query:       KHJ35017.1  [L=200]
Description: putative duf1168 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.2e-36  123.0  10.9      1e-35  122.5  10.9    1.2  1  DUF1168          Protein of unknown function (DUF1168)
  ------ inclusion threshold ------
       0.47    9.3   6.4       0.63    8.8   6.4    1.1  1  VPS38            Vacuolar protein sorting 38
        2.1    7.6   6.1        2.7    7.2   6.1    1.1  1  PPL5             Prim-pol family 5
        4.9    5.3  10.4        5.8    5.1  10.4    1.1  1  CDC45            CDC45-like protein
        6.6    6.8   8.1         11    6.1   8.1    1.4  1  Peptidase_S49_N  Peptidase family S49 N-terminal


Domain annotation for each model (and alignments):
>> DUF1168  Protein of unknown function (DUF1168)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.5  10.9   2.8e-39     1e-35       2     117 ..      44     159 ..      43     182 .. 0.83

  Alignments for each domain:
  == domain 1  score: 122.5 bits;  conditional E-value: 2.8e-39
     DUF1168   2 dkevkipekkkekks...rappefvrnVmGSSAGAGSgeFhvYrhlRrrEyeRlklieekskkeeedeefqqkleenkeeaeektaKkrakRekkkqka 97 
                 d+e+ ip ++ +  +   ++ppe+v+nV+GSSAGAGSgeFhvY+++RrrEyeRl+ + +++kke+ede ++++++e++e++ e t+Kkr+kRe+ k   
  KHJ35017.1  44 DQEITIPPSSASTGQynvPQPPEIVQNVQGSSAGAGSGEFHVYKASRRREYERLRDMMAETKKEKEDEIWEKQKREREERDREITRKKREKRERLK--- 139
                 8999999886554422349*****************************************************************************... PP

     DUF1168  98 kkkkkakkkkkkekekeeks 117
                 kkk k+ k++ k++++++ +
  KHJ35017.1 140 KKKGKDAKNDLKTSRTDSLN 159
                 44444444444444444333 PP

>> VPS38  Vacuolar protein sorting 38
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   6.4   0.00018      0.63     207     282 ..     105     177 ..      86     181 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00018
                 HS--S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--S-THHHHHHHHHHHHHHHHHHHHHH CS
       VPS38 207 kseekkelwslkelqkaieqlkksiekkklklkrLessleeenskteessesqeeslnddYgntyseliqiknrle 282
                 k+e++ e+w++++ ++  e  ++ ++kk+ k +rL++++   +++++  ++s++ sln+dY +  + ++   ++l+
  KHJ35017.1 105 KKEKEDEIWEKQK-REREERDREITRKKREKRERLKKKKG--KDAKNDLKTSRTDSLNEDYSKPMPGVVAEGDKLN 177
                 4555666775544.4445555666789999*******888..57888899999***********999999988886 PP

>> PPL5  Prim-pol family 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   6.1   0.00075       2.7     164     234 ..      83     161 ..      66     185 .. 0.42

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.00075
        PPL5 164 yhvharsltyleerlaaeakgveeveeks........skkkskekkkklkkktsrkkkkegkkekesekeeededeedd 234
                 +hv+  s   + erl++  +++++ +e++        ++++ +e ++k ++k +r kkk+gk++k++ k+++ +  ++d
  KHJ35017.1  83 FHVYKASRRREYERLRDMMAETKKEKEDEiwekqkreREERDREITRKKREKRERLKKKKGKDAKNDLKTSRTDSLNED 161
                 5555544444444443333333332222200000000222222222333333333333444444433333333333333 PP

>> CDC45  CDC45-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1  10.4    0.0016       5.8     120     214 ..      91     156 ..      79     191 .. 0.47

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0016
       CDC45 120 reayealeeeeesdeedeeeeeeddddeeeeeeeeedeedeeedeeeskkkrksksdeeeesddddersrkrrrsepsakklrrqlkkerrkyea 214
                 r +ye+l+++  +++++ +e+e  ++ +++e e   ++++e ++++++k++r +k++ +++                        +++++ + ++
  KHJ35017.1  91 RREYERLRDMMAETKKE-KEDEIWEK-QKRERE---ERDREITRKKREKRERLKKKKGKDA------------------------KNDLKTSRTD 156
                 44566666666664222.11111111.111111...1111122222222222222222211........................2222222222 PP

>> Peptidase_S49_N  Peptidase family S49 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   8.1     0.003        11      48     106 ..      92     149 ..      67     167 .. 0.46

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.003
  Peptidase_S49_N  48 eeykelkeeleealldeeelkaaekkekkee.keekkaekkkake...eeekkrvfvldFkGd 106
                      +ey++l++ + e+  +e+e   +ek+++++e ++++ ++kk++k+   +    +    d k d
       KHJ35017.1  92 REYERLRDMMAETK-KEKEDEIWEKQKREREeRDREITRKKREKRerlK----KKKGKDAKND 149
                      34555555444433.3333344444433333022222333333322221....1112244444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (200 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2422  (0.135088); expected 358.6 (0.02)
Passed bias filter:                      789  (0.0440069); expected 358.6 (0.02)
Passed Vit filter:                       119  (0.00663729); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 1491.70
//
Query:       KHJ35018.1  [L=1037]
Description: putative condensin subunit cnd3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.8e-91  304.1   3.0    8.8e-91  304.1   3.0    2.2  2  Cnd3           Nuclear condensing complex subunits, C-term do
    3.9e-08   33.6   1.9     0.0025   18.2   0.1    4.4  3  HEAT_2         HEAT repeats
    5.2e-06   26.3   9.9        7.4    7.1   0.0    7.6  7  HEAT           HEAT repeat
     0.0069   16.4   8.8      0.082   13.0   0.1    5.2  5  Cnd1           non-SMC mitotic condensation complex subunit 1
  ------ inclusion threshold ------
      0.075   12.6   0.3         25    4.3   0.0    3.5  3  CLASP_N        CLASP N terminal
       0.12   13.0   0.1        1.2    9.8   0.1    2.7  2  Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
        1.1    9.4   3.8         15    5.8   0.0    2.9  3  PBP_GOBP       PBP/GOBP family


Domain annotation for each model (and alignments):
>> Cnd3  Nuclear condensing complex subunits, C-term domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.1       0.5   1.3e+03      18      46 ..     158     186 ..     145     194 .. 0.84
   2 !  304.1   3.0   3.4e-94   8.8e-91       1     294 []     627     918 ..     627     918 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.5
                 TSCCHHHHHHHHTHHHHHC-SSHHHHHHH CS
        Cnd3  18 eenpsleslleslilpavrskeaairelg 46 
                 ++n  + s l +++lp +  k++++r ++
  KHJ35018.1 158 TSNTRIISYLMDIVLPLLSAKDKSVRYRS 186
                 67888999999************999775 PP

  == domain 2  score: 304.1 bits;  conditional E-value: 3.4e-94
                 HHHHHHHHHHHT--S-TTSCCHHHHHHHHTHHHHHC-SSHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHH-CGGG CS
        Cnd3   1 rcLaitqelLenvsssleenpsleslleslilpavrskeaairelglkcLglfclldkklakenlklflqalskgneelkiialkaifDllllhglevl 99 
                 +cL+i+q++Lenv+++l++n +l+++l++li+pavrs+ea++re+gl cLgl++lldk+la+enl+lf+++++kg+++l+i+al++++D++++hg+ +l
  KHJ35018.1 627 KCLHIVQCMLENVEGQLQQNTDLVAMLNNLIVPAVRSHEAPVRERGLLCLGLCALLDKSLAEENLTLFMHFFTKGHPALQITALQILTDIVITHGAYLL 725
                 8***********************************************************************************************999 PP

                 GGGHH..............HHHHHHHHHHC-TT-.HHHHHHHHHHHHHHHHHH--SHH.....HHHHHHHHHHH-GGGTT-HHHHHHHHHHHHHHHCC- CS
        Cnd3 100 dkekkedsdeeeeesessksllkllykaLdsedn.pelqaiaaeglcKLllagiltds.....elLsrLvllyFnpeteenqrLrQcLsvffpvYafss 192
                 d++                 llk+++kaL+s ++ pe+qa+aa  l+KLll +i++d+     ++L+ L+++yF+p++++nq +rQ+Ls+f+p+Ya+ss
  KHJ35018.1 726 DNNP---------------LLLKVYLKALKSGNKtPEVQAVAAISLAKLLLGRIISDAspavnDFLRVLIIIYFDPSSAQNQSVRQTLSYFLPAYAYSS 809
                 6644...............7**********77667********************887888877*********************************** PP

                 HHHHHHHHHHHHHHHHHHHHHCH--.......-SHCHHHHHHHHHHHHT-GGGS---------TT........--HHHHHHHHHHHHCCCS-THH.HHH CS
        Cnd3 193 pknqellaeiflptlrtllnapeespla....eeevspskvleqlvdltdprklvnkteeeeskseseke...eelhldlaleilkelekkeskeekka 284
                 ++nq + + + l+++++l++a+e++  +     e+vs+++++++lvd+tdprk++ + ++++s +  +k+    ++hl++a++i+++l+++ s+eekka
  KHJ35018.1 810 KENQYRTCVAGLDAFHKLFEARETINDEddaeLEMVSMTTIGAHLVDWTDPRKCYINCNHNTSDEVFKKRnidGDVHLEFAKDIITRLSSSISREEKKA 908
                 ***********************99777999999********************9998888877766666899************************** PP

                 HHHHHHH--- CS
        Cnd3 285 liklLsklei 294
                 l++lL+kl+i
  KHJ35018.1 909 LASLLGKLHI 918
                 ********98 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.1   9.8e-07    0.0025       7      86 ..     174     278 ..     168     280 .. 0.75
   2 !    8.7   0.1   0.00087       2.2       1      51 [.     286     342 ..     286     348 .. 0.73
   3 ?    2.1   0.0       0.1   2.6e+02      28      59 ..     727     762 ..     691     790 .. 0.62

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 9.8e-07
      HEAT_2   7 alendpdpevrraairaLgrignp..........ealpaLvellededpavRraaaeaLgai................gdpealpaLkellddddddvv 79 
                 +l + +d+ vr++  + +  i n           ++++ L + + d+++ vR +a+  L+++                +d+ +l+ L+  l++d++++v
  KHJ35018.1 174 LL-SAKDKSVRYRSTQLISHIINSlntidddlflRLQKELQKRIYDKEAIVRSQAVLGLSRLaandidiefndldcenDDEGSLQKLCGVLQNDPSADV 271
                 56.677777888877777754444444555589999***********************98855555555554444434799***************** PP

      HEAT_2  80 ReaAaea 86 
                 R++ + +
  KHJ35018.1 272 RRSLLTN 278
                 *987665 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00087
      HEAT_2   1 ldaLlqalendpdpevrr.aairaLg...rignpea...lpaLvellededpavRraa 51 
                 l+ Ll+++ +d d+++rr   +r L    ++++ ++    ++L+  ++d d++vR+a 
  KHJ35018.1 286 LPFLLERA-RDQDHNTRRaLYCRLLPalgDFRHLSLsmrEKLLRWGMRDRDENVRKAT 342
                 57899999.89999998744555544333777776666566666688********985 PP

  == domain 3  score: 2.1 bits;  conditional E-value: 0.1
      HEAT_2  28 gnpealpaLvelleded..pavRraaaeaLgai..g 59 
                 +np +l+  +++l++ +  p+v++ aa +L+++  g
  KHJ35018.1 727 NNPLLLKVYLKALKSGNktPEVQAVAAISLAKLllG 762
                 455667777788866444588888888888876442 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0038       9.7       1      28 [.     167     194 ..     167     197 .. 0.91
   2 !    7.1   0.0    0.0029       7.4       5      29 ..     212     236 ..     208     237 .. 0.89
   3 ?    5.0   0.0     0.013        34       5      24 ..     259     279 ..     256     282 .. 0.83
   4 ?    0.8   0.1       0.3   7.7e+02       2      19 ..     286     303 ..     286     312 .. 0.90
   5 ?    0.7   0.0      0.33   8.4e+02       6      20 ..     327     342 ..     324     348 .. 0.77
   6 ?    0.6   0.1      0.35   9.1e+02       4      25 ..     656     677 ..     653     681 .. 0.84
   7 ?    2.6   0.0     0.082   2.1e+02       2      28 ..     732     760 ..     731     762 .. 0.84

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0038
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgala 28 
                 l++++l lls ++ +VR+ + + + +++
  KHJ35018.1 167 LMDIVLPLLSAKDKSVRYRSTQLISHII 194
                 7999****************99999987 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0029
                 HHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   5 llkllsDpspeVReaAakaLgalae 29 
                 l+k + D+++ VR+ A++ L +la 
  KHJ35018.1 212 LQKRIYDKEAIVRSQAVLGLSRLAA 236
                 789999****************985 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.013
                 HHHHH.T-SSHHHHHHHHHHH CS
        HEAT   5 llkll.sDpspeVReaAakaL 24 
                 l+  l +Dps++VR++ + +L
  KHJ35018.1 259 LCGVLqNDPSADVRRSLLTNL 279
                 778888********9988876 PP

  == domain 4  score: 0.8 bits;  conditional E-value: 0.3
                 HHHHHHHHT-SSHHHHHH CS
        HEAT   2 lPlllkllsDpspeVRea 19 
                 lP+ll+  +D++ + R+a
  KHJ35018.1 286 LPFLLERARDQDHNTRRA 303
                 8**********9999876 PP

  == domain 5  score: 0.7 bits;  conditional E-value: 0.33
                 HHH.HT-SSHHHHHHH CS
        HEAT   6 lkl.lsDpspeVReaA 20 
                 l++ ++D + +VR+a+
  KHJ35018.1 327 LRWgMRDRDENVRKAT 342
                 555479********97 PP

  == domain 6  score: 0.6 bits;  conditional E-value: 0.35
                 HHHHHHT-SSHHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaLg 25 
                 l++ + ++ ++ VRe  +++Lg
  KHJ35018.1 656 LIVPAVRSHEAPVRERGLLCLG 677
                 677788899999*********9 PP

  == domain 7  score: 2.6 bits;  conditional E-value: 0.082
                 HHHHHHHHT-..SSHHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsD..pspeVReaAakaLgala 28 
                 l + lk+l++  + peV + Aa +L++l+
  KHJ35018.1 732 LKVYLKALKSgnKTPEVQAVAAISLAKLL 760
                 6667888888889************9985 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.29   7.5e+02      16      65 ..     161     210 ..     152     212 .. 0.78
   2 !   13.0   0.1   3.2e-05     0.082      22      76 ..     208     273 ..     202     280 .. 0.69
   3 ?    0.7   0.0      0.19   4.8e+02      26      42 ..     327     343 ..     303     356 .. 0.85
   4 ?   -1.4   0.7      0.85   2.2e+03      65     146 ..     569     644 ..     540     658 .. 0.47
   5 ?    2.6   0.0      0.05   1.3e+02      33      67 ..     744     779 ..     730     842 .. 0.70

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.29
        Cnd1  16 pnlveylvepLrkrLkDedpyVRktaaivvakLilndmvkekgflselak 65 
                 + ++ yl++ +   L+ +d  VR     +++++i+    ++ +++ +l+k
  KHJ35018.1 161 TRIISYLMDIVLPLLSAKDKSVRYRSTQLISHIINSLNTIDDDLFLRLQK 210
                 56788888888888888899999999999999988877777777777765 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 3.2e-05
        Cnd1  22 lvepLrkrLkDedpyVRktaaivvakLilndm........vk..ekgflselakll.eDenprVva 76 
                 l ++L+kr+ D+++ VR +a++++++L  nd+        ++  ++g l++l   l +D+++ V+ 
  KHJ35018.1 208 LQKELQKRIYDKEAIVRSQAVLGLSRLAANDIdiefndldCEndDEGSLQKLCGVLqNDPSADVRR 273
                 5689***********************666642122333333224456677766666666666665 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.19
        Cnd1  26 LrkrLkDedpyVRktaa 42 
                 Lr +++D+d+ VRk + 
  KHJ35018.1 327 LRWGMRDRDENVRKATH 343
                 77789999999999886 PP

  == domain 4  score: -1.4 bits;  conditional E-value: 0.85
        Cnd1  65 klleDenprVvanalaalteiseksenaiynllpdiiskl.sdalnecsewgqitilefLlsyipkdkqeaeslveklcprlq 146
                 +++ D ++++++ + +  ++ s        +  + iisk+ sd+ ne+++++q + ++ +l   +  +   + ++e++  +lq
  KHJ35018.1 569 EAVADVHDTIIDDTTNENNDASFH------SARSGIISKViSDETNEIEKEEQEKAIREILINLKCLHI-VQCMLENVEGQLQ 644
                 555555555554444433333333......222333333203344555555554444444433333333.3444444444444 PP

  == domain 5  score: 2.6 bits;  conditional E-value: 0.05
        Cnd1  33 edpyVRktaaivvakLilndmvkekg.flselakll 67 
                 + p V+  aai +akL+l  ++ +    ++++++ l
  KHJ35018.1 744 KTPEVQAVAAISLAKLLLGRIISDASpAVNDFLRVL 779
                 6799************87777776655555555444 PP

>> CLASP_N  CLASP N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1       0.1   2.6e+02     138     196 ..     174     227 ..     156     235 .. 0.70
   2 ?    2.3   0.0     0.041   1.1e+02     173     202 ..     319     348 ..     313     363 .. 0.87
   3 ?    4.3   0.0    0.0099        25     161     214 ..     741     794 ..     730     801 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.1
     CLASP_N 138 alqdKnvqpReysaiwLkilltrfeshkskleasllldliekslkkgleDanptVReta 196
                 +l+ K ++ R  s+++++ ++++ +    +++  l l  ++k l+k + D +  VR++a
  KHJ35018.1 174 LLSAKDKSVRYRSTQLISHIINSLN----TIDDDLFL-RLQKELQKRIYDKEAIVRSQA 227
                 4445555556666777788888888....77777755.778888888888888888765 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.041
     CLASP_N 173 lldliekslkkgleDanptVRetaRstfwe 202
                  l++ ek+l+ g+ D + +VR+++ ++f e
  KHJ35018.1 319 SLSMREKLLRWGMRDRDENVRKATHKLFSE 348
                 467889******************999965 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.0099
     CLASP_N 161 feshkskleasllldliekslkkgleDanptVRetaRstfweffkvwPsrAksl 214
                 +++++ +++a + ++l++ +l ++++Da+p+V +  R +++ +f+   ++ +s+
  KHJ35018.1 741 SGNKTPEVQAVAAISLAKLLLGRIISDASPAVNDFLRVLIIIYFDPSSAQNQSV 794
                 33678888899999999999*******************999998666666655 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.1   0.00046       1.2      19      88 ..     158     227 ..     153     235 .. 0.89
   2 ?   -2.1   0.0       2.4   6.2e+03      77      90 ..     331     344 ..     315     348 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00046
  Vac14_Fab1_bd  19 kkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvksga 88 
                    ++ +++++ ++++vl  +s kd+ vRy ++  +  i+  +++    l+ ++ + l k + D+++ v+s a
     KHJ35018.1 158 TSNTRIISYLMDIVLPLLSAKDKSVRYRSTQLISHIINSLNTIDDDLFLRLQKELQKRIYDKEAIVRSQA 227
                    556788999***************************9999999999999999999999999999999876 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 2.4
  Vac14_Fab1_bd  77 vaDsdesvksgael 90 
                    + D de+v+++++ 
     KHJ35018.1 331 MRDRDENVRKATHK 344
                    56999999998875 PP

>> PBP_GOBP  PBP/GOBP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.2     0.024        60      11      55 ..      72     114 ..      66     131 .. 0.71
   2 ?   -4.2   0.1         7   1.8e+04     105     112 ..     630     637 ..     624     640 .. 0.58
   3 ?    5.8   0.0    0.0059        15      41      78 ..     858     895 ..     833     910 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.024
                 HHHHHHHHHHHHHTS-TTHHHHHHTT-SSS-HHHHHHHHHHHHHT CS
    PBP_GOBP  11 kikqlrkeClkelgvsdesleklkkgefpdddelkcfikCilkkf 55 
                 k+++++++C  e++  +   ++l +g f++d+ ++ f++Ci++ +
  KHJ35018.1  72 KLRKIQDACCCETQGGKSG-THLIEG-FNEDQFKHEFMRCIFHVL 114
                 6788888888555533333.344443.777878899*****9866 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 7
                 HHHHHHHH CS
    PBP_GOBP 105 kifkCfle 112
                 +i++C+le
  KHJ35018.1 630 HIVQCMLE 637
                 45555554 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0059
                 -HHHHHHHHHHHHHTTCBETTSSBBHHHHHHHHHHHTC CS
    PBP_GOBP  41 ddelkcfikCilkkfglmdedgklnedklveqlekmfs 78 
                 +d  kc+i+C  +  + + ++ +++ d+ +e++++  +
  KHJ35018.1 858 TDPRKCYINCNHNTSDEVFKKRNIDGDVHLEFAKDIIT 895
                 6778***********999999**********9998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1037 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       766  (0.0427241); expected 358.6 (0.02)
Passed bias filter:                      525  (0.0292822); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.78u 0.27s 00:00:01.05 Elapsed: 00:00:00.45
# Mc/sec: 6998.18
//
Query:       KHJ35019.1  [L=906]
Description: putative component of the trk1p-trk2p potassium transport system [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   8.9e-139  463.1  20.8   6.9e-138  460.2   9.9    2.1  2  TrkH      Cation transport protein


Domain annotation for each model (and alignments):
>> TrkH  Cation transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.7   3.1     3e-05      0.53     154     233 ..      26     102 ..       7     135 .. 0.71
   2 !  460.2   9.9  3.8e-142  6.9e-138     111     501 ..     414     804 ..     389     805 .. 0.98

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 3e-05
        TrkH 154 yvgleilafvllvvliytakaysevvdstgvsplwwaffhsmSafnnlGfsltp.nSlasfnknivillvaiifiilGnig 233
                 ++++++ ++v++vv+++     s  + stg     +a+f s  a +++G+ + + nSl+++++ ++  +++i   i+ n++
  KHJ35019.1  26 FSFITVHYIVIIVVFLVG----SICIYSTGNIDYIDALFLSCGASTQAGLNTVDlNSLKTWQQFVLYMIPIITNPIVMNTS 102
                 556666666666555543....44667888889999999999999999999999999999999555555555555666654 PP

  == domain 2  score: 460.2 bits;  conditional E-value: 3.8e-142
        TrkH 111 aylsl.ptlgrgsaflylseaqkeelggkelrslselikilvvyyvgleilafvllvvliytakaysevvdstgvsplwwaffhsmSafnnlGfsltpn 208
                 +yls+ pt+gr+safl l+e+q++elgg+e+rsl+ l++ilv y++g+ +l++++lv++i+ +  +sevv+ +g  ++wwa+f++ Saf++lGf+ltp+
  KHJ35019.1 414 PYLSWqPTIGRNSAFLDLTEQQRDELGGIEYRSLKTLAVILVSYFFGFSLLGIICLVPWIIRNSSFSEVVKADGQGKVWWAIFTANSAFTDLGFTLTPD 512
                 7************************************************************************************************** PP

        TrkH 209 SlasfnknivillvaiifiilGnigFpillrviiaikkkilrdlkqikeslsflldlprrcftLllasgfvwllllelavlnvtdnilfilldegslvv 307
                 S+ sf+ + ++l v++++i +Gn+gFpi+lr+ii++  +i++  +  ++ l flld+prrcftLl++  ++ +l l l++ln +d ++fi ld+g+  v
  KHJ35019.1 513 SMISFQLATWPLTVMSFLITIGNTGFPIMLRIIIWVCSRITPNGSGAQQELRFLLDHPRRCFTLLFPATATLWLTLVLIILNTVDVAFFISLDLGKDFV 611
                 *************************************************************************************************** PP

        TrkH 308 ksipkgsrvlkalFqsvstrtaGFsvvdlsnlhpaikvllvlmmyigglpgStaggIrrtnvyeefslgkyeieqekepkavskksidgkhlerqllvd 406
                 k +p   r+l+++Fq+vstrtaGFs+vdls +hpa++v+ ++mmyi+  p  +a+++rrtnvyee+slg+y +++  e++ +  +  +  hl++ql++d
  KHJ35019.1 612 KHLPMRIRILDGFFQAVSTRTAGFSIVDLSMIHPAVQVSFLIMMYISIFP--IAISVRRTNVYEEQSLGIYSLSNRLEEDGEDDQTYISTHLRQQLSFD 708
                 **************************************************..*******************9988888788****************** PP

        TrkH 407 lwslflvlliilileglklsdvqepdfsffdiLfevvSaygtvGLSlG.a.knaslsaqlttisklvlialmirGrlrglpvlldraillpsdklee 501
                 lw+++l+l+ii ++eg +l++     f++f i+fe+vSaygtvGLSlG    nasls ++  ++k+v+ia++irGr+rglp  ldrai+lps+ l +
  KHJ35019.1 709 LWYICLGLFIIAVAEGARLQSGD-SRFTLFSIIFEIVSAYGTVGLSLGyRnINASLSSEFGVVGKIVIIAMQIRGRHRGLPHELDRAIILPSETLQQ 804
                 *******************9988.6***********************9889****************************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (906 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       795  (0.0443416); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 5987.22
//
Query:       KHJ35020.1  [L=419]
Description: hypothetical protein EV44_g1839 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
  ------ inclusion threshold ------
      0.073   11.7   2.0       0.13   10.8   2.0    1.3  1  Peptidase_S46  Peptidase S46


Domain annotation for each model (and alignments):
>> Peptidase_S46  Peptidase S46
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   2.0   7.4e-06      0.13     348     463 ..     214     330 ..     201     349 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 7.4e-06
                    HHTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHH....HH-HHHHHHHHHHHHHHCHHHHCS--HHHHHHHHHHHHHHH CS
  Peptidase_S46 348 kygkalselealvkekrklaersalleeaessgsellslarklvrlaeerekpdaereeeyqeralealekeleridkdldaevdkavlaallkey 443
                    k   + +++ +++++++ +  +++ +++ ++++ e++ ++  + +l + r k +++++ ++++ a+e + k+++    + ++++++a  +++l++ 
     KHJ35020.1 214 KSLSMAEQILEMLEDEKYTGSKYRDISTHQRNHPEVIGIPLCIATLIASRFKDNKDKDLQVTKYATEFTLKSVAMPLPSSSNDLEQARTVQELENH 309
                    455677889999999999999999*********************************************************************976 PP

                    HHH.S-GGG--S----SS... CS
  Peptidase_S46 444 rek.lkaerlpavdkvlgkes 463
                     ++  ++++ +++ k++++++
     KHJ35020.1 310 VKAlRNTDKAQELTKAIKSRN 330
                    665056778888999999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (419 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1196  (0.0667076); expected 358.6 (0.02)
Passed bias filter:                      722  (0.04027); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.46
# Mc/sec: 2756.48
//
Query:       KHJ35021.1  [L=225]
Description: putative mitochondrial ribosomal protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-13   50.8   0.1    2.1e-13   50.2   0.1    1.3  1  Ribosomal_L19  Ribosomal protein L19


Domain annotation for each model (and alignments):
>> Ribosomal_L19  Ribosomal protein L19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.2   0.1   1.2e-17   2.1e-13      40     102 ..     122     186 ..     101     194 .. 0.91

  Alignments for each domain:
  == domain 1  score: 50.2 bits;  conditional E-value: 1.2e-17
  Ribosomal_L19  40 afeGvviarkgkgisetftvRkisegvgvervfplhspkiekievv..rrgkvrrakLyYLrelk 102
                     f Gv+i+ +++g+++ +++R+    vgve  ++++sp+++ ie+v  r ++ rra+L Y+r+ k
     KHJ35021.1 122 PFAGVCINIRRRGVDTAILLRNHLTRVGVEMWYKIYSPNVAGIEIVqrRVKRARRARLTYMRKPK 186
                    69*******************************************9444589**********866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       318  (0.0177366); expected 358.6 (0.02)
Passed bias filter:                      272  (0.015171); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1738.47
//
Query:       KHJ35022.1  [L=225]
Description: hypothetical protein EV44_g3932 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       254  (0.014167); expected 358.6 (0.02)
Passed bias filter:                      242  (0.0134977); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.37
# Mc/sec: 1824.15
//
Query:       KHJ35023.1  [L=1324]
Description: putative cation chloride cotransporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.3e-58  196.5  35.9    8.5e-58  196.1  35.9    1.2  1  AA_permease    Amino acid permease
    5.3e-16   58.5  42.9    8.6e-16   57.8  42.9    1.3  1  AA_permease_2  Amino acid permease
    7.1e-16   58.3  18.6    1.1e-08   34.6   0.0    4.3  5  SLC12          Solute carrier family 12


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  196.1  35.9   1.4e-61   8.5e-58       1     478 [.     128     606 ..     128     607 .. 0.89

  Alignments for each domain:
  == domain 1  score: 196.1 bits;  conditional E-value: 1.4e-61
  AA_permease   1 hvlvialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngp.ksggfytyasrflgpelGfviGlnylfswitvlaleltaa 97 
                  +v+v + ++v ++ +f++ g+ ++qaG lg++ +++ ++++ + ++ sl++ia+ng  ++gg+y+++sr+lgpe+G++iGl++ +  +++ +l  +++
   KHJ35023.1 128 GVFVPTCLNVLSILMFLRFGFLIGQAGFLGIMGMLIASYLINLVTTFSLSAIASNGTvRGGGAYYLISRSLGPEFGGSIGLIFYLGLVFNTGLNAVGL 225
                  6889999************************9999999********************************************999999********** PP

  AA_permease  98 siliqfwelvtdlpkawvt............gavflvvlliinlvgvkvygeaefilalikiiaiiafiivg..iillaggkpnkgagfrflgdngsi 181
                  + +i++   + + +  w+             ++v+l+v ++++++g  ++ +a+  l++i+iia ++       i++  ++++  ++++ +++  +s+
   KHJ35023.1 226 IDCIKLN--FGKTSGNWAQilpespwylylwSTVVLLVCTAVCFAGSSLFSRASNALLVILIIATLSIPFSAflISPYQEKDLGIDYTGLSWSTFLSN 321
                  ****999..8888888888889999999999*************************999999999876555543666666666666666777777777 PP

  AA_permease 182 fknnlppgfakeeegafknfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasaaspfvif 279
                  +k +l++g a+++      f  +f i+++a  Gi ++a ++g++k+P+ksiPk++l+ + +++++Y+++++++ ++v r    ++ d++        +
   KHJ35023.1 322 LKPHLTKGAAGSQLQGRETFQDLFGILFPATGGIFAGASMSGDLKNPSKSIPKGTLYGLGTTFVLYTIVIITMASTVTRET--FIRDAN--------I 409
                  7777777766555556678999*******************************************************9998..666555........3 PP

  AA_permease 280 ikesgvsvlaplinaviltaalssansslysasRvlyslakdglaP...kvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisal 374
                  i+  + ++ + ++ a+ l++al+s + +++ + ++l++la+d+++P    + ++   + +P +ai+++++i+++ +l++  + a +i++++l+++  +
   KHJ35023.1 410 IQ--DTNISGLVVLAGELASALFSTLMGVIGSAKLLQALARDNILPgfsIFSQGTINGDEPSNAIIITYVIAQITMLCNLNQIASFITMTYLMTF-LV 504
                  34..4555566899*********************************955566777888*****************9987777766666666665.68 PP

  AA_permease 375 iglivwlliilsylrfRkalkyqgrsieelgfkaallplgvilvlaaliiillilalyayltvkkgpkdwgaasfaaaylivllfliilvgvklhvkn 472
                  ++l+++ll i s ++fR++++  +++++++g ++  + ++++ ++ a   + ++  +++++ + ++pk+wg +s+ + y++v  +l++l+    hvk+
   KHJ35023.1 505 MNLACFLLKIGSAPNFRPSFHFFNWQTALFGTIISAVAMFFVDGFYATGCVSILILVFIIIHYNTPPKSWGDVSQSLIYHQVRKYLLRLKQ--EHVKF 600
                  9**********************************************9999999999999****************************986..68999 PP

  AA_permease 473 krpqll 478
                  +rpq+l
   KHJ35023.1 601 WRPQIL 606
                  999986 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.8  42.9   1.4e-19   8.6e-16      23     385 ..     145     550 ..     123     586 .. 0.73

  Alignments for each domain:
  == domain 1  score: 57.8 bits;  conditional E-value: 1.4e-19
  AA_permease_2  23 n...laasggpalilwvwiavligslavllvyaElssa.lprsgGiyvytkaafgkkvaflsawfnwfayvpvlasilsvaasyl.lnalgpdlqg 113
                        l++ +g + i+  +ia+ ++ l   + +  ++s    r gG+y   ++  g+ ++   + ++ ++ v+ + + ++ ++  + ln +g++  +
     KHJ35023.1 145 RfgfLIGQAGFLGIMGMLIASYLINLVTTFSLSAIASNgTVRGGGAYYLISRSLGPEFGGSIGLIFYLGLVFNTGLNAVGLIDCIkLN-FGKTSGN 239
                    23456999999999999999999999999999999888799999****************************9999999999999655.6664444 PP

  AA_permease_2 114 n.......twltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl......stetdtffpngwp....gvll 192
                    +       +w  yl   ++l+++++++  g +  +++ n l ++ i+ +l i + + li     ++            ++tf++n  p    g ++
     KHJ35023.1 240 WaqilpesPWYLYLWSTVVLLVCTAVCFAGSSLFSRASNALLVILIIATLSIPFSAFLISP---YQEKDlgidytGLSWSTFLSNLKPhltkGAAG 332
                    56666666******************99999999999988777777555544444444443...22222455777555666555544421113322 PP

  AA_permease_2 193 ...........gllivlwsfdGfesaanvseevkk..kdvpkaifigllivlvlyllvniaflgvvpddeianlsnlgsvaalffeavggkvvaii 275
                                ++i + +++G+ + a++s   k+  k +pk++ +gl++++vly+ v i+++  v+ +++   +n+        + ++    +++
     KHJ35023.1 333 sqlqgretfqdLFGILFPATGGIFAGASMSGDLKNpsKSIPKGTLYGLGTTFVLYTIVIITMASTVTRETFIRDANI-------IQDTN---ISGL 418
                    44555565666888889999999999******7777699*******************************9876663.......35556...5566 PP

  AA_permease_2 276 vvilial.sllgaintavigssrvlealardgvlP..rffakvn.kfgspiraiiltaivslillllfllassaaynfllsvsslgliisylllii 367
                    vv+++ l s+l++ ++ vigs+ +l+alard++lP  + f++       p++aii+t+++++i + l+       +n ++s  ++ ++  +l++ +
     KHJ35023.1 419 VVLAGELaSALFSTLMGVIGSAKLLQALARDNILPgfSIFSQGTiNGDEPSNAIIITYVIAQITM-LCN------LNQIASFITMTYLMTFLVMNL 507
                    66555553888899999***************************88889************9975.564......699****************** PP

  AA_permease_2 368 galilrkkrphlkrpgk.........................i 385
                    ++++l++ +    rp +                         +
     KHJ35023.1 508 ACFLLKIGSAPNFRPSFhffnwqtalfgtiisavamffvdgfY 550
                    ******9999877755533442223333333333333332223 PP

>> SLC12  Solute carrier family 12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.2   1.1       2.1   1.3e+04     198     209 ..      66      77 ..      15     111 .. 0.34
   2 !   34.6   0.0   1.8e-12   1.1e-08       3      87 ..     617     703 ..     615     717 .. 0.85
   3 !   13.2   0.0   5.4e-06     0.032     253     307 ..     834     889 ..     796     894 .. 0.91
   4 ?   -3.4   3.9      0.63   3.8e+03     159     191 ..    1032    1064 ..     982    1165 .. 0.52
   5 !   22.1   0.1   1.1e-08   6.7e-05     362     424 ..    1254    1320 ..    1249    1322 .. 0.90

  Alignments for each domain:
  == domain 1  score: -5.2 bits;  conditional E-value: 2.1
       SLC12 198 kkekkkkkekke 209
                 + ++++ k  ++
  KHJ35023.1  66 NIKSHRGKYGSQ 77 
                 111111111111 PP

  == domain 2  score: 34.6 bits;  conditional E-value: 1.8e-12
       SLC12   3 aLvdlahlitknvsLlicghvvkeklsqklreel...tkkaqkwLkkrkikaFyalvdaesleegakaLlqasGlgklkpnilllGyk 87 
                 +L+++++++ k+ sL i gh++ ++   +   e    +   ++++   kikaF ++  ++ +e ga++++ ++Glg ++pni +lG+ 
  KHJ35023.1 617 KLIQFCNSM-KKGSLYILGHIIVSDDFGSSVPEArrqQAAWSNYIDFSKIKAFVNIAISNGIEWGARNIVLSAGLGGMRPNIAVLGFY 703
                 699999998.678*******998876544433332446777899999***************************************96 PP

  == domain 3  score: 13.2 bits;  conditional E-value: 5.4e-06
       SLC12 253 DDGgLtlllpyilstrkkw.kecklRvFalankkeeleeeqremaslLskfridys 307
                 D   L+l l  il+t   w k+ klRv +  + ++++eee+ +++slL+ +ri+  
  KHJ35023.1 834 DTYTLILQLGAILNTVPAWkKSYKLRVLVFVEYESDVEEERGRVESLLENLRIKAD 889
                 566799999**********7778******************************964 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 0.63
       SLC12  159 kkkklleekskekeekekleekdsnlslseekk 191 
                  +++ ++++++ +++++++l++++++ +l ++k 
  KHJ35023.1 1032 ESDGESSQSAASENDAKDLDSENEDIELGTSKL 1064
                  111111111111111111111111111111111 PP

  == domain 5  score: 22.1 bits;  conditional E-value: 1.1e-08
       SLC12  362 KtnrqlrlrElLkehSskanLivmsLPvprkgav....saalYmaWLevLtkdlpPvlLvRGnqtsv 424 
                  ++ ++l l+El++ +S+++ ++  +LP p  g++    ++a Y+  Le+  ++ pPv++v  n  +v
  KHJ35023.1 1254 RSAQHLILNELIRLNSTETVVMFTTLPSPVEGTClsneASASYLKDLETFCRNCPPVMMVHSNSMTV 1320
                  67899***************************9965545689*******************998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1176  (0.0655921); expected 358.6 (0.02)
Passed bias filter:                      611  (0.0340789); expected 358.6 (0.02)
Passed Vit filter:                        61  (0.00340231); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.95u 0.30s 00:00:01.25 Elapsed: 00:00:00.45
# Mc/sec: 8780.35
//
Query:       KHJ35024.1  [L=456]
Description: putative peptidase family m48 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      7e-64  215.1   9.3      7e-64  215.1   9.3    1.9  2  Peptidase_M48_N  CAAX prenyl protease N-terminal, five membra
    2.1e-43  148.4   0.0      4e-43  147.5   0.0    1.4  1  Peptidase_M48    Peptidase family M48
     0.0072   15.5   0.0      0.014   14.6   0.0    1.4  1  Peptidase_M56    BlaR1 peptidase M56
  ------ inclusion threshold ------
       0.18   11.7   0.0       0.32   10.8   0.0    1.3  1  SprT-like        SprT-like family


Domain annotation for each model (and alignments):
>> Peptidase_M48_N  CAAX prenyl protease N-terminal, five membrane helices
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.1   9.3   1.6e-67     7e-64       1     182 []      40     224 ..      40     224 .. 0.98
   2 ?   -0.6   0.3      0.24   1.1e+03      80     104 ..     315     338 ..     285     372 .. 0.58

  Alignments for each domain:
  == domain 1  score: 215.1 bits;  conditional E-value: 1.6e-67
  Peptidase_M48_N   1 qlrklketkkvPeeladaitkekfdksraYgldksrfglvsslyslilllallllgllpflwklsgkl....lgldaeseilqslvfllllsli 90 
                      q+++lk t+ +P+ l++++++e fdks+aYg++k++fgl+++l+++i+++a++++++lp+lw+l+g++    + +  ++ei +s+vf+l++ +i
       KHJ35024.1  40 QYKVLKLTH-PPKVLQNEVSQEVFDKSQAYGRAKAKFGLITGLLGQIQNTAFIYYDILPKLWTLTGSWllryFPVRFSGEISHSIVFVLTFIVI 132
                      99*****97.**********************************************************977655588***************** PP

  Peptidase_M48_N  91 stlislPfslYstFviEekhGfnkqtlklfikdklkslllalviglpllaallwiiewggeyfylylwlfllvfslllmtiyPtlIaPLFnK 182
                      ++++s+P s+Y+tFv+Ee++Gfnkqt+klf++d+lk+++la++++ p+la++l i++++g++f++ylwlf + ++++++t+yP+ I PLFnK
       KHJ35024.1 133 QQILSIPSSVYQTFVLEERFGFNKQTPKLFLMDMLKGQMLAFILTPPILAGFLSIVQKTGNKFFYYLWLFGAGLQVFMITVYPITILPLFNK 224
                      *******************************************************************************************9 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.24
  Peptidase_M48_N  80 slvfllllslistlislPfslYstF 104
                      ++ f+ +++l+s +++   slY++F
       KHJ35024.1 315 QAHFFYIFALFSVFVN-NASLYESF 338
                      3333333333333333.23333333 PP

>> Peptidase_M48  Peptidase family M48
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.5   0.0     9e-47     4e-43       2     192 ..     228     430 ..     227     432 .. 0.96

  Alignments for each domain:
  == domain 1  score: 147.5 bits;  conditional E-value: 9e-47
                    --SSHHHHHHHHHHHHTT-..-EEEEEEE-GGGT....-EEEEESSS-EEEEEEHHHH-SSB-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_M48   2 lreaelkevveelakeaglpkpltkvyvvnspkr....NAFalgggknkrivltdgLlkqllseeelaaVlGHElGHikhrhsvvslivsllasil 93 
                    l+ ++lk+ ve+la+++++  pl ++ v++++kr    NA++ g  ++k+iv++d+L+ ++ s ee+ aVl+HElGH+  +h+++ + +s+   ++
     KHJ35024.1 228 LEPGDLKTGVENLARRLKF--PLHELHVIDGSKRsahsNAYFFGLPWKKHIVIYDTLI-EKSSSEEVVAVLAHELGHWSLGHTTKLFGISQAHFFY 320
                    567899*************..*************************************.************************************* PP

                    HHHHHHHHTT-SHHHHHTT--S---HHHHHHHHHHTT.............HHHHHHHHHHHHHHHHTTT.HHHHHHHHHHHHHHTT--S---HHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_M48  94 lllglallisraeedaagafldalavliglliillfl.............alSRkrEyqADeagvellkrakdlvraliklakdlerqdvsaslrs 176
                    ++ ++++++++a++  +++f+++ +++ig++  ++ +              lSR+ E+qAD++++el++ +kdl+++likl+ +++++ ++++ ++
     KHJ35024.1 321 IFALFSVFVNNASLYESFGFHKNYPIIIGFIL-FSDAlspmdtfikllmnILSRRYEFQADNFAKELGY-SKDLAQSLIKLQIQNLSTMDADWIYA 414
                    **************************999664.5555799*****************************.************************** PP

                    HHS-SS--HHHHHHHH CS
                    xxxxxxxxxxxxxxxx RF
  Peptidase_M48 177 ellstHPplleRiqal 192
                     ++ +HP+l+eR++a+
     KHJ35024.1 415 SYHFSHPILTERLSAI 430
                    *************997 PP

>> Peptidase_M56  BlaR1 peptidase M56
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   3.1e-06     0.014      88     207 ..     179     302 ..     105     309 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 3.1e-06
  Peptidase_M56  88 alatdvkkvewktilkillliWivgalilllyliaallvlkkrfvrklgklraeelkeaLkeakeemq..lkrn..ikirlsssidsPavlgl.lk 178
                    +  + + ++ +kt  k+  ++W++ga +  +++i+++ +    ++ kl++l++  lk  +++  ++ +  l     i  ++ s  ++  ++gl +k
     KHJ35024.1 179 PILAGFLSIVQKTGNKFFYYLWLFGAGL-QVFMITVYPITILPLFNKLSPLEPGDLKTGVENLARRLKfpLHELhvIDGSKRSAHSNAYFFGLpWK 273
                    5555666777888889999******999.7778888877765599*******99999999998888884433331144466777889999997588 PP

  Peptidase_M56 179 prIvlPadflkklsdeeleyillHElaHl 207
                      Iv+ + + +k s ee   +l+HEl H 
     KHJ35024.1 274 KHIVIYDTLIEKSSSEEVVAVLAHELGHW 302
                    9**************************96 PP

>> SprT-like  SprT-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   7.2e-05      0.32      47      77 ..     274     304 ..     260     315 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 7.2e-05
   SprT-like  47 asIeLseklldsrsedrllntLaHElcHlal 77 
                 ++I +  +l+++ s+++++ +LaHEl H  l
  KHJ35024.1 274 KHIVIYDTLIEKSSSEEVVAVLAHELGHWSL 304
                 589999**********************865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (456 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       503  (0.0280551); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3481.89
//
Query:       KHJ35025.1  [L=351]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.21s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 2970.31
//
Query:       KHJ35026.1  [L=553]
Description: putative ion transport protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.3e-06   27.8   4.3    2.2e-06   27.1   4.3    1.3  1  Ion_trans  Ion transport protein
  ------ inclusion threshold ------
      0.019   14.9   1.8       0.87    9.6   0.1    3.4  4  DUF5356    Family of unknown function (DUF5356)


Domain annotation for each model (and alignments):
>> Ion_trans  Ion transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   4.3   2.5e-10   2.2e-06      28     117 ..     457     539 ..     424     552 .. 0.76

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 2.5e-10
                 HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHCHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGGHHHCHSHHHH CS
   Ion_trans  28 delektileilelvftaiftlemllkilalgllikkrYlrdpwnilDflvvlpsllslvlseesllllsvlrlfrvlrllklisrleglr 117
                 d  + ++l ++ +++   f++e ++ ++++gl   ++Yl++p  ilD+lvv ++++s  l     ++  + +l+ +lrl +l++r++++ 
  KHJ35026.1 457 DGIR-SLLGMFGFMISNAFVVEQAISFWTFGL---RNYLTSPYHILDLLVVGITFASSLLP---SFIDEFASLLVILRLWRLFKRVGSII 539
                 4455.7888999999999**************...*********************88552...45555555556677777777766644 PP

>> DUF5356  Family of unknown function (DUF5356)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.1   9.7e-05      0.87      97     127 ..      98     141 ..      66     150 .. 0.76
   2 ?    2.9   0.1     0.011        98      98     126 ..     156     184 ..     144     192 .. 0.81
   3 ?   -2.6   0.0      0.56     5e+03      99     122 ..     198     221 ..     182     239 .. 0.79
   4 ?   -2.1   0.0      0.39   3.5e+03      98     123 ..     241     266 ..     218     276 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 9.7e-05
     DUF5356  97 k.............eadalarLvqaiaellledkeqegveVeik 127
                 +             e+ +  +Lv+ +a +++++k+++g+ +++ 
  KHJ35026.1  98 NvlsssisqipqtsEESNSSKLVSSAASIFSSNKTEDGAHIQVP 141
                 2444444445555589999**********************985 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.011
     DUF5356  98 eadalarLvqaiaellledkeqegveVei 126
                 e  +  +L++a+a +l+ dk++eg + ++
  KHJ35026.1 156 EVSNSSKLISAAASILTIDKKDEGIQTQV 184
                 577889****************9987766 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 0.56
     DUF5356  99 adalarLvqaiaellledkeqegv 122
                   ++a L++ ++ +l+  k+++++
  KHJ35026.1 198 VPRVADLISTSTSVLNTCKTDDNT 221
                 556788999999999998888766 PP

  == domain 4  score: -2.1 bits;  conditional E-value: 0.39
     DUF5356  98 eadalarLvqaiaellledkeqegve 123
                 e  +  r+++  + ll+ ++++e+++
  KHJ35026.1 241 ELPSTSRVISSTVSLLSKNEKDESTN 266
                 45567788888888888888888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (553 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       640  (0.0356964); expected 358.6 (0.02)
Passed bias filter:                      330  (0.0184059); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.36
# Mc/sec: 4547.15
//
Query:       KHJ35027.1  [L=547]
Description: putative e3 ubiquitin-protein ligase hula [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (547 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 4060.54
//
Query:       KHJ35028.1  [L=191]
Description: putative rnp domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-14   53.8   0.0    1.8e-14   53.3   0.0    1.3  1  RRM_1            RNA recognition motif. (a.k.a. RRM, RBD, or 
     0.0041   17.8   6.7     0.0099   16.5   6.7    1.6  1  GRP              Glycine rich protein family
  ------ inclusion threshold ------
      0.022   15.2   1.4      0.039   14.4   1.4    1.3  1  ZapB             Cell division protein ZapB
      0.031   14.1   1.8      0.051   13.4   1.8    1.4  1  DivIC            Septum formation initiator
       0.07   13.6   0.6       0.11   12.9   0.6    1.2  1  GPS2_interact    G-protein pathway suppressor 2-interacting d
      0.073   13.0   1.8        0.1   12.5   1.8    1.1  1  EMP24_GP25L      emp24/gp25L/p24 family/GOLD
      0.087   12.6   1.8       0.12   12.2   1.8    1.1  1  DUF724           Protein of unknown function (DUF724)
       0.18   12.5   2.2       0.24   12.1   2.2    1.1  1  NAM-associated   No apical meristem-associated C-terminal dom


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.3   0.0   8.3e-18   1.8e-14       1      70 []      69     138 ..      69     138 .. 0.99

  Alignments for each domain:
  == domain 1  score: 53.3 bits;  conditional E-value: 8.3e-18
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 +fVgn+ ++   eeL ++F+ +G+i+++++  d  tg +kg+a+VeF  ++  ++Al  ln+  ++gr+lk
  KHJ35028.1  69 IFVGNVDYSSIPEELQAHFQSCGSINRVTILLDkFTGHPKGYAYVEFSEPSFVAQALV-LNESVFKGRNLK 138
                 8*********************************************************.*********986 PP

>> GRP  Glycine rich protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   6.7   4.4e-06    0.0099      37      89 ..     143     186 ..     119     190 .. 0.43

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 4.4e-06
         GRP  37 eeevkdekyggggkhggGgygggggggngGGGykgggGgygggggggeggyGg 89 
                 +++v    +g+    g+Gg+ g g+ g   GGy  +gGgy+gg  g +   G 
  KHJ35028.1 143 RTNVPGMTRGR----GRGGFRGRGYSG--RGGYIPRGGGYRGGYRGVR---GR 186
                 33333333322....455555555533..3455555555555433332...33 PP

>> ZapB  Cell division protein ZapB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   1.4   1.8e-05     0.039      18      61 ..      24      67 ..      24      68 .. 0.95

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.8e-05
        ZapB 18 dtitlLqmeieeLkeeneelkeenreleeeneqlkeereawqer 61
                d+i++++ +++e++ee ++l e ++ l ++ + ++e++e + +r
  KHJ35028.1 24 DEISAMKRRVAEMEEEAAKLREMQASLDQQSNDMREDPEDIDSR 67
                799***********************************998876 PP

>> DivIC  Septum formation initiator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   1.8   2.3e-05     0.051      19      59 ..      26      66 ..      20      68 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 2.3e-05
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-XXXXXXXXX CS
       DivIC 19 ykqlkqeiaalqaelaklkaeneeLeaevkdLksdedyiee 59
                ++++k+ +a+ ++e akl++ +++L+++ +d++ d++ i+ 
  KHJ35028.1 26 ISAMKRRVAEMEEEAAKLREMQASLDQQSNDMREDPEDIDS 66
                67899*******************************99876 PP

>> GPS2_interact  G-protein pathway suppressor 2-interacting domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.6   4.9e-05      0.11      46      80 ..      22      56 ..      18      64 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 4.9e-05
  GPS2_interact 46 veqqiskLkkkqkeleeeaakpkeeekpvepssse 80
                    e +is +k++  e+eeeaak  e +   +++s +
     KHJ35028.1 22 EEDEISAMKRRVAEMEEEAAKLREMQASLDQQSND 56
                   5899*****************99998888887655 PP

>> EMP24_GP25L  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.8   4.6e-05       0.1      99     157 ..      12      70 ..       5      74 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.6e-05
  EMP24_GP25L  99 seasdykdsakkekletleselkkleekldsikreqkylrereerlrdtnestnsrvvw 157
                  ++a  ++d + +++++ +++++ ++ee   ++++ q +l ++ + +r+  e++ sr ++
   KHJ35028.1  12 NNAIAQDDGNEEDEISAMKRRVAEMEEEAAKLREMQASLDQQSNDMREDPEDIDSRSIF 70 
                  44444667778*******************************************99876 PP

>> DUF724  Protein of unknown function (DUF724)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   1.8   5.2e-05      0.12     122     172 ..      16      66 ..       2      71 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.2e-05
      DUF724 122 esekrkleeeidelekkilelerqlallkekkeaadkeiarlkseaeklee 172
                 ++++ + e+ei+ ++++++e+e+++a l+e++ + d++  +++ + e+++ 
  KHJ35028.1  16 AQDDGNEEDEISAMKRRVAEMEEEAAKLREMQASLDQQSNDMREDPEDIDS 66 
                 4455556899*****************************999999988875 PP

>> NAM-associated  No apical meristem-associated C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   2.2   0.00011      0.24     110     160 ..      24      87 ..       5      89 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00011
  NAM-associated 110 kkskekkee.aeleekkldieeekveaeqrqaeee............ImskDlsglddkqkeYy 160
                     ++  ++k++ ae+ee+ ++++e +++ +q++++++            + ++D s+++++ ++ +
      KHJ35028.1  24 DEISAMKRRvAEMEEEAAKLREMQASLDQQSNDMRedpedidsrsifVGNVDYSSIPEELQAHF 87 
                     233445555555*********************************99999****9999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (191 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1402  (0.0781973); expected 358.6 (0.02)
Passed bias filter:                     1001  (0.0558313); expected 358.6 (0.02)
Passed Vit filter:                       175  (0.00976072); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.39
# Mc/sec: 1471.01
//
Query:       KHJ35029.1  [L=408]
Description: putative wd repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    0.00033   20.9   0.0       0.21   11.9   0.0    3.2  2  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0044   17.8   1.3         18    6.4   0.0    4.4  4  WD40         WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   2.4e-05      0.21      33      81 ..      71     119 ..      17     141 .. 0.77
   2 !    5.0   0.0    0.0033        29      10      48 ..     295     333 ..     287     344 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.4e-05
  ANAPC4_WD40  33 eedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                   +  + ++ r L ++ dg+ L  +  dg v++ ++++g+v  ++ + + 
   KHJ35029.1  71 RTRRHRGSCRTLIYSVDGEALFSSGTDGLVKVASSHTGRVFAKIAIPQP 119
                  457788899*******************************999887665 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0033
  ANAPC4_WD40  10 iAlatedgellvfRlngqrvwtleedkedsevrsLaWkp 48 
                  i ++ e+g++++ Rl  +++ ++ +++e + v +L +  
   KHJ35029.1 295 IVVGVESGDVHIVRLGPNKITSTLNHDEIEGVVALDFDI 333
                  334455555555555555555555555555555555555 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0      0.72   6.5e+03      15      33 ..      16      34 ..       6      53 .. 0.73
   2 !    4.3   0.0     0.009        81      10      36 ..      75     102 ..      69     103 .. 0.69
   3 ?    2.3   0.0      0.04   3.5e+02       5      28 ..     164     197 ..     160     205 .. 0.63
   4 !    6.4   0.0    0.0021        18      10      37 ..     320     348 ..     312     349 .. 0.76

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 0.72
                EEEEETTSSEEEEEETTSE CS
        WD40 15 slafspdgawlasGsdDgt 33
                ++a++p  + la G   g+
  KHJ35029.1 16 AQAVHPTEPILAVGLAGGH 34
                5667777777776633444 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.009
                 S.SSEEEEEEETTSSEEEEEETTSEEEE CS
        WD40  10 H.ssvtslafspdgawlasGsdDgtvri 36 
                 H +s + l +s dg  l+s++ Dg v++
  KHJ35029.1  75 HrGSCRTLIYSVDGEALFSSGTDGLVKV 102
                 5544344444459999987777***997 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.04
                 EEEESSSS.EEEEE.........EETTSSEEEEE CS
        WD40   5 rtltGHss.vtsla.........fspdgawlasG 28 
                 +++  H++ vts+             +++w+++G
  KHJ35029.1 164 QKYQPHNDyVTSITslppsasstSGYSKQWISTG 197
                 6678896668887654455555544455555555 PP

  == domain 4  score: 6.4 bits;  conditional E-value: 0.0021
                 SSS...EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  10 Hss...vtslafspdgawlasGsdDgtvriW 37 
                 H+    v +l+f+ +++++ sG+    v++W
  KHJ35029.1 320 HDEiegVVALDFDIENRLI-SGG-GTYVKVW 348
                 6234558899999999997.8**.******* PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       570  (0.0317921); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3245.97
//
Query:       KHJ35030.1  [L=424]
Description: putative fatty acid elongase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-73  246.1  12.9    4.9e-73  245.7  12.9    1.1  1  ELO       GNS1/SUR4 family
  ------ inclusion threshold ------
      0.034   14.6   0.1       0.11   13.0   0.0    1.9  3  AAA       ATPase family associated with various cellular acti


Domain annotation for each model (and alignments):
>> ELO  GNS1/SUR4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  245.7  12.9   5.4e-77   4.9e-73       4     248 ..      45     405 ..      43     407 .. 0.96

  Alignments for each domain:
  == domain 1  score: 245.7 bits;  conditional E-value: 5.4e-77
         ELO   4 sspkvpiliallYlllvllgpklmknr..kpf......klkalvilhnlflavlSavgfvgmvkallevlkk.......kglvdllck........... 76 
                  ++kvp+++a++Y+ +v+ ++++++++  kp+       + ++v+lhn+ la++S ++f+gm   l++++ +       +++vd+lck           
  KHJ35030.1  45 LDYKVPFTVAAIYAGTVFSLNSYNRKNqsKPWaisktkLFFTFVVLHNITLALYSGWTFLGMWGTLSRSIPSphgpdslVKIVDSLCKihgppglgksm 143
                 6899*********************5545999*****999***********************77777776688888889******************* PP

         ELO  77 .......................ddssdegrlrngllaflvllfylsKfvEllDTvflvlrkkqvsfLhvYHHatvmllmwaglrfatssgivfivllN 152
                                        ++ ++ gr++n++laf++++fy+sKf+E++DT+++++++kq+ +L++YHH+++ml+mwag+rf+ s++i+++v++N
  KHJ35030.1 144 iynatsnqwvsqstpytldgtdiAKLQSFGRIWNEGLAFYGWIFYVSKFYEVIDTLIILAKGKQSEILQTYHHTGAMLCMWAGIRFM-SPPIWMFVFVN 241
                 **********************9888999**********************************************************.*********** PP

         ELO 153 sfvHaimYtYYflsalgakklvvpwkrliTslQilQfvvgl.laavyllvsytlkk........................................... 207
                 s++H++mYtY+++++l+++ ++   k+++T+ QilQf+vg+ +aa+++++sy +                                             
  KHJ35030.1 242 SAIHTLMYTYFTFTTLNIQ-VPQILKKSLTTAQILQFIVGAsYAAIHSFISYSFLFevpiiktvlntsasttlssvrsivtstsfsekikelliislgr 339
                 ****************998.99999**************************9887799***************************************** PP

         ELO 208 .........................vgC.dts.qtpkaairlnllyllslllLFlnffiksylkkkkk 248
                                           +C dts q  ++a++ln+lyl++l++LF+nff++sy ++++k
  KHJ35030.1 340 snkvqsevkspeftefhtlhsekiiSDClDTSgQ--NFAVWLNVLYLTPLTFLFVNFFVNSYFRRSTK 405
                 ****************************999955..55*************************99875 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.0   0.0   1.2e-05      0.11       3      37 ..     133     168 ..     131     211 .. 0.75
   2 ?   -3.5   0.0       1.4   1.3e+04      25      48 ..     255     288 ..     244     292 .. 0.65
   3 ?   -2.9   0.0      0.93   8.4e+03     101     120 ..     314     334 ..     300     345 .. 0.60

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 1.2e-05
                 EESSTTSSHHHHHHHHHHHH..THEEEEEETTTCSSS CS
         AAA   3 lyGppGtGKTllakavakel..gvefleisgsellsk 37 
                 ++GppG GK+++ +a  +++  +++ ++++g+++  k
  KHJ35030.1 133 IHGPPGLGKSMIYNATSNQWvsQSTPYTLDGTDIA-K 168
                 69*****************7446777888888887.3 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 1.4
                 EEEEEETTTCSSS..........STTHHHHHHHH CS
         AAA  25 efleisgsellsk..........yvgesekkire 48 
                 + l+i+++++l+k          +vg+s + i+ 
  KHJ35030.1 255 TTLNIQVPQILKKslttaqilqfIVGASYAAIHS 288
                 5577777777765566666666667776666665 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 0.93
                 STEEEEEEESS.GGGSTHHHH CS
         AAA 101 skvivigatnr.pdkldpall 120
                 s v  i+++++  +k+++ l+
  KHJ35030.1 314 SSVRSIVTSTSfSEKIKELLI 334
                 446677777775666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (424 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       810  (0.0451782); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3358.52
//
Query:       KHJ35031.1  [L=1187]
Description: putative tgf beta receptor associated protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    0.00021   21.6   0.6      0.035   14.4   0.1    3.4  3  Vps39_1   Vacuolar sorting protein 39 domain 1
    0.00048   20.5   0.0     0.0037   17.7   0.0    2.4  3  Vps39_2   Vacuolar sorting protein 39 domain 2


Domain annotation for each model (and alignments):
>> Vps39_1  Vacuolar sorting protein 39 domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.1     4e-06     0.035      30     105 ..     804     875 ..     775     877 .. 0.76
   2 ?   -0.5   0.1      0.17   1.5e+03      11      49 ..     897     939 ..     895     949 .. 0.77
   3 ?    2.8   0.0     0.016   1.4e+02      42      64 ..    1025    1047 ..    1018    1057 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 4e-06
     Vps39_1  30 kdveeiLkkekkykeLidlYygkklheeALeLlkeladedeedeedsslkgeketiiqylqklseedldlileysk 105
                 +   + L++ek++  L  lY++++++++ Le ++++ d ++ d   ++l+gek  +++yl ++  + + li ++  
  KHJ35031.1 804 ERAITLLESEKRLYVLSRLYQSRNMENKVLETWQRILD-NDLDIGSEFLEGEK-IVLDYLLSI--HIIPLIEKFGV 875
                 5667899*******************************.44455555555555.559999887..66666666655 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.17
     Vps39_1  11 ktkpklvgpLlrleNaCdlkdveeiL....kkekkykeLidlY 49 
                 k +p+ v+++lr     ++kd  e L     +++ ++eLi +Y
  KHJ35031.1 897 KHEPSRVLDILRSGASAAVKDYLEYLvfqkRHNEYINELIVYY 939
                 5678889999999999999999999977644455567888887 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.016
     Vps39_1   42 ykeLidlYygkklheeALeLlke 64  
                  + eLi+l  +k +h +AL Ll++
  KHJ35031.1 1025 VPELIILDGRKANHDKALRLLIH 1047
                  669999999***********986 PP

>> Vps39_2  Vacuolar sorting protein 39 domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0      0.55     5e+03      40      40 ..     518     518 ..     464     561 .. 0.46
   2 ?   -2.8   0.1      0.96   8.6e+03      13      56 ..     900     938 ..     888     960 .. 0.46
   3 !   17.7   0.0   4.1e-07    0.0037       2      67 ..    1111    1176 ..    1111    1183 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.55
     Vps39_2  40 s 40 
                  
  KHJ35031.1 518 D 518
                 1 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.96
     Vps39_2  13 plevLdllPdelplkdlesfleka.lrnslekkreeqvvkklrka 56 
                 p++vLd+l +  + + ++++le   +++++++  +e +v      
  KHJ35031.1 900 PSRVLDILRSGAS-AAVKDYLEYLvFQKRHNEYINELIV-----Y 938
                 6667776654332.2233333332033333333333333.....3 PP

  == domain 3  score: 17.7 bits;  conditional E-value: 4.1e-07
     Vps39_2    2 elLskhaerldplevLdllPdelplkdlesflekalrnslekkreeqvvkklrkaeklsveeellk 67  
                  +lL++ ++ +d   vL+++Pd+++++ ++ fl +a+ + ++++ +   vk l+ ae+ +++ el++
  KHJ35031.1 1111 DLLERFGSWFDIEYVLRVIPDTWSVELISGFLINAIGQIVRERGKILTVKALSGAENIKANLELIG 1176
                  5889999999***********************************************999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       461  (0.0257125); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.76u 0.28s 00:00:01.04 Elapsed: 00:00:00.46
# Mc/sec: 7766.05
//
Query:       KHJ35032.1  [L=231]
Description: hypothetical protein EV44_g6202 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (231 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1828.75
//
Query:       KHJ35033.1  [L=498]
Description: putative hard surface induced protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-21   76.6  32.1    4.7e-21   75.2  32.1    1.8  1  Acyl_transf_3  Acyltransferase family


Domain annotation for each model (and alignments):
>> Acyl_transf_3  Acyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2  32.1   2.6e-25   4.7e-21       2     340 .]      67     475 ..      66     475 .. 0.81

  Alignments for each domain:
  == domain 1  score: 75.2 bits;  conditional E-value: 2.6e-25
                    xxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxx RF
  Acyl_transf_3   2 aylDllRgiAillVvflHali....ayspdagrgspiqasqssqi.....aflggfgvplFFllSGffla..........amlyrrrglsklikrR 78 
                     ylD+lRg+A ++V+++H+       +  ++g  ++ +as  +q+     +++ + +v++FF++SG++la          + l     ls+ i+rR
     KHJ35033.1  67 SYLDGLRGVASFIVFMGHYTEenigWFCEPYGLYEDGAASSPLQLpfvrvLYSARPMVHIFFVISGLVLAykpltyihsqQLLALENCLSSSIFRR 162
                    59********************99955555667777777777777788888****************************99999999********* PP

                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Acyl_transf_3  79 ilrlliplliwllliillialvaghiqanasanvtlfdet..............kglmfllfefpatghlWfLwalfvlylllplllrllrkvrks 160
                    ++rl++p +i l++ +l + +   ++ +       ++  +               ++    +   ++++lW+++++f  +l+l++ +  l +  + 
     KHJ35033.1 163 AIRLFLPSFIALIFTALAVGSNLSDSRYSYFDGNFFYHFFnalnvcwklmgaswAIDLLDNGHPEYNPALWSIPVEFSQSLILFITILGLSRCTSI 258
                    *****999999998888888888777775555555554447889**********99********************99999999996666666666 PP

                    xxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Acyl_transf_3 161 hlllllilllllslvfirhel....fgpatsvgllplpsvla..........llfflfGalladaddrdrnlsrglkislllsllllalillalfg 242
                    ++l l  ++l + l ++ +       g+    + l                 l+  ++ +   d++ ++++ + + k  l+ +++ + + + ++ +
     KHJ35033.1 259 VRLGLHSFILWYCLRSGHLFTaeflGGSLIAEFILIQ----DyslsilqegpLFDTISSVQTEDLFGKKTSYRFKIKQNLIHLFWIMNIVCGLFIA 350
                    6655555544444444444431111443333333333....1455589998899999999999999999999999999999999999999999999 PP

                    xxxx.............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........ RF
  Acyl_transf_3 243 qtdg.............gglvasvliqsaslllvslgimllllllfalpsrsafk...llrylgkiSygiYliHlpllmllqkllrdw........ 314
                    ++ +              +   ++ i   + +++++g++ +++++  l ++++++   + +ylg+iS+ +Yl H + l +l+ ++++         
     KHJ35033.1 351 SWTNehfdevwgisflsRNTPEPYDIRNGAKFWFCIGALQIVIACTQLSWLKNILnmaIPQYLGSISFPLYLTHNLCLRILEPIFIPIfekvigkt 446
                    999999999999***99999999999999999******************************************6666666666666655555544 PP

                    xxx...xxxxxxxxxxxxxxxxxxxxxxx RF
  Acyl_transf_3 315 gln...lgevlllvlllvvsvivsvvlli 340
                    +++   l ++  l+++++v++ +s ++++
     KHJ35033.1 447 SFWerhLFWIAGLLIYFPVIIMISDLFWR 475
                    77788899*****************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (498 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       453  (0.0252663); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.22s 00:00:00.73 Elapsed: 00:00:00.37
# Mc/sec: 3984.18
//
Query:       KHJ35034.1  [L=482]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-31  108.4   1.5    4.8e-12   45.7   0.0    3.4  3  Septin    Septin
  ------ inclusion threshold ------
      0.041   13.5   0.1        1.4    8.5   0.1    2.5  1  Ras       Ras family
       0.12   12.5   0.1       0.65   10.1   0.1    2.5  1  MMR_HSR1  50S ribosome-binding GTPase


Domain annotation for each model (and alignments):
>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   2.1e-09   1.3e-05       7     123 ..     128     254 ..     124     267 .. 0.72
   2 !   34.9   0.3   1.6e-12   9.6e-09     124     194 ..     286     356 ..     282     367 .. 0.86
   3 !   45.7   0.0   8.1e-16   4.8e-12     201     272 ..     409     476 ..     375     481 .. 0.83

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 2.1e-09
                 EEEEEBTTSSCCCCCCTTSSSS----...........--------------S-EEEEEEEEETTCEEEEEEEE---BSSSSSHHCCCHHHHHHHHHHHH CS
      Septin   7 lmvvGesglGkttlintlfetdliee...........ekleeasekkkktveikkkkvvieedgvklnltviDtpgfGdavdnskswepiveyideqfe 94 
                 +++ G+++ Gkt+++n l ++   +            e +  +     +  +++k+  +   d  ++nlt+ D +g   +   +   + i+ +i+++fe
  KHJ35034.1 128 ILILGTKSCGKTSFLNFLKSSFAPPPtkkishltdlrEDIFAPPYP--RIGNFEKHYFETTIDSDRVNLTLWDSQGLEKE-TIDYQLQEILLFIESKFE 223
                 8999**********99886654443344455555443222223222..3334444444444455699*********9654.33456899********** PP

                 HHHHHCTSS--..SS-----EEEEEEEE-TT CS
      Septin  95 eylreesklkR..kkivDkRvHaclyfisPt 123
                 + +ree k++R   +  D+ +H ++++++P 
  KHJ35034.1 224 TTFREELKVNRapFSSRDTHIHFVFFLLDPL 254
                 ***********655678************96 PP

  == domain 2  score: 34.9 bits;  conditional E-value: 1.6e-12
                 SSSS-HHHHHHHHHHTTTS-EEEEESSGGGS-HHHHHHHHHHHHHHHHHTT--------SSSS-SCCHHHH CS
      Septin 124 ghglkpldvelmkklsekvnliPviaKaDtltkeElkefKkkireeleeeeikiyklpdeeededeeakel 194
                 g+  ++++++++++l+ k+ ++P+iaKaD++t+  ++ +K+kire+l + +++ +++ ++e+d ++ +++ 
  KHJ35034.1 286 GRMEDDIEIKVIRALQGKAIVLPIIAKADIVTSTHMDFLKRKIREKLWKANLNPFDVLETEDDVNDSFQTS 356
                 5566789*************************************************988888875554443 PP

  == domain 3  score: 45.7 bits;  conditional E-value: 8.1e-16
                 C-SEEB-SSSSEEEESSSEEEEEEETTEEEETT-TTT-SCCHHHHHHHHHCHHHHHHHHHHTHHHHHHHHHH CS
      Septin 201 slPfaivgsneliekkgkkvrgRkypWGvvevenekhsdFlkLrklllkthledLkevteellYetyRsekl 272
                 ++Pf+ ++ +  +     +  gRk+pWG+ +  n++h+dF+ L+++++ ++  dL+ev +++lYe++R++++
  KHJ35034.1 409 TFPFSTISPDL-Y---DPQSAGRKFPWGLADPLNSEHCDFVYLKNMVFYEWRDDLQEVCRNILYERWRTNRF 476
                 55666664432.2...24568***********************************************9975 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.5   0.1   0.00024       1.4       2      59 ..     128     203 ..     127     210 .. 0.62

  Alignments for each domain:
  == domain 1  score: 8.5 bits;  conditional E-value: 0.00024
                 EEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEE....................EEEEEEEETTEEEEEEEEEETTSG CS
         Ras   2 lvlvGdsavGKtslllrfvkdkFkeeyesTigvd....................fytkeievdgkevkleiwDTAGqe 59 
                 ++++G +++GKts+l +f k++F    ++ i                       ++  e+++d+ +v+l++wD  G e
  KHJ35034.1 128 ILILGTKSCGKTSFL-NFLKSSFAPPPTKKIS-HltdlredifappyprignfeKHYFETTIDSDRVNLTLWDSQGLE 203
                 689999999999997.5888888754444442.112244455555555555433333445566777888888877766 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.1   0.00011      0.65       2      57 ..     128     216 ..     127     393 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00011
                 EEEEESTTSSHHHHHHHHHTS..TEEESSSTTSSSSEEEEEEE..................ETTEEEEEEECGGC.............S CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge..kaivsdkpgtTrdinegrvk..................lkgkeielvDtpGl.............i 57 
                 ++i+G    GK++++n l  +     ++++   T   + +                      ++ +++l+D  Gl             +
  KHJ35034.1 128 ILILGTKSCGKTSFLNFLKSSfaPPPTKKISHLTDLREDIFAPpyprignfekhyfettidSDRVNLTLWDSQGLeketidyqlqeilL 216
                 89****************99843347777777776665553323333333323333333222235588888888544444444444330 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (482 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       696  (0.0388198); expected 358.6 (0.02)
Passed bias filter:                      435  (0.0242624); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.41
# Mc/sec: 3555.10
//
Query:       KHJ35035.1  [L=850]
Description: putative 5-methylcytosine g t mismatch-specific dna glycosylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (850 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2130  (0.118802); expected 358.6 (0.02)
Passed bias filter:                      609  (0.0339673); expected 358.6 (0.02)
Passed Vit filter:                        87  (0.00485247); expected 17.9 (0.001)
Passed Fwd filter:                        25  (0.00139439); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.05u 0.32s 00:00:01.37 Elapsed: 00:00:00.46
# Mc/sec: 5545.79
//
Query:       KHJ35036.1  [L=211]
Description: putative protein family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-06   28.6   5.8    2.6e-06   27.8   5.8    1.5  1  EI24      Etoposide-induced protein 2.4 (EI24)
  ------ inclusion threshold ------
      0.054   12.9   3.4       0.75    9.1   0.2    2.2  2  UPF0121   Uncharacterised protein family (UPF0121)


Domain annotation for each model (and alignments):
>> EI24  Etoposide-induced protein 2.4 (EI24)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   5.8   2.9e-10   2.6e-06      81     177 ..      73     187 ..      15     188 .. 0.65

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 2.9e-10
                 HH...................CCTTSHHHHHHHHHHHHHHHHHHHHH.HHTTHHH....HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCTHHHHHH CS
        EI24  81 hl...................glvkslaeslkslllllllllvllpl.liPvvglilsplllswltayfycfeyldlaagrsleerrallerrrayflg 159
                 hl                   g + +l+ ++ s   +l   l +lpl liP++g+ +++ + +   + + +  y+ l   ++++e  +++ +++a+++ 
  KHJ35036.1  73 HLlsgrrelkvgyfndpvtklGALIRLPIGVLSSE-TLAGYLSFLPLaLIPIFGVYIFIGVQAQARGCIVHNRYFQLKN-WNRSEVNEWIYQKAAQYIM 169
                 43344444445444543333333333443333322.23344457778888********999999999999999988877.9****************** PP

                 HHHHHHHHTTSCCHHCTH CS
        EI24 160 fGllvslllliPllnllf 177
                 fGl++s+l ++P+++++f
  KHJ35036.1 170 FGLVASALEMVPFVSIFF 187
                 ****************98 PP

>> UPF0121  Uncharacterised protein family (UPF0121)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.3    0.0019        17     165     189 ..      31      55 ..      23      70 .. 0.89
   2 ?    9.1   0.2   8.4e-05      0.75      53      98 ..     130     176 ..     108     197 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0019
     UPF0121 165 pllivllllgkaslllpllYyqfLk 189
                 +l ++ l+l+++s+l+ l+Y  fL+
  KHJ35036.1  31 FLSTFVLILNESSFLITLIYRSFLQ 55 
                 566788999999***********97 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 8.4e-05
     UPF0121  53 llanaatsalrlhqrlpql.rlsreylerllledsvhyLlysliFlf 98 
                 +   a +   ++h+r+ ql +++r+ +++ +   +++y+++ l+   
  KHJ35036.1 130 IGVQAQARGCIVHNRYFQLkNWNRSEVNEWIYQKAAQYIMFGLVASA 176
                 445566677899****55549*********************99655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       695  (0.038764); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 1649.27
//
Query:       KHJ35037.1  [L=377]
Description: hypothetical protein EV44_g0245 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       473  (0.0263818); expected 358.6 (0.02)
Passed bias filter:                      251  (0.0139997); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.42
# Mc/sec: 2682.25
//
Query:       KHJ35038.1  [L=336]
Description: putative 3-hydroxybutyryl- dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.7e-47  159.7   0.8    8.8e-47  159.3   0.8    1.2  1  3HCDH_N         3-hydroxyacyl-CoA dehydrogenase, NAD binding 
    9.8e-34  115.9   0.0    1.9e-33  114.9   0.0    1.5  1  3HCDH           3-hydroxyacyl-CoA dehydrogenase, C-terminal d
  ------ inclusion threshold ------
      0.049   13.8   0.0       0.11   12.6   0.0    1.6  1  NAD_binding_2   NAD binding domain of 6-phosphogluconate dehy
      0.058   13.0   0.0      0.097   12.2   0.0    1.4  1  UDPG_MGDP_dh_N  UDP-glucose/GDP-mannose dehydrogenase family,


Domain annotation for each model (and alignments):
>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.3   0.8     2e-50   8.8e-47       2     175 ..      52     233 ..      51     238 .. 0.93

  Alignments for each domain:
  == domain 1  score: 159.3 bits;  conditional E-value: 2e-50
                 EEEE--SCCHHHHHHHHHHT.T-EEEEE-S-HHHHHHHHHHHHHHHHCCTTTTSS-HHHHCCCHHCEEEES-HHHHHC-SEEEE-S-SSHHHHHHHHHH CS
     3HCDH_N   2 vaviGaGtmGagiaavfasa.gleVvlvdiseealekalekieksleklvekgklkeeeveaalarisfttdleeavdadlviEavvEnlelKrkvfae 99 
                 ++++G G+mG gi  v+a++ +++V+lvd+s+ +++k+l+ +ek l+k v k+++++e+++++   +s++t+++++ ++d+viEa++E  +lK ++f++
  KHJ35038.1  52 LGIVGVGQMGLGIGLVAAQKaKIPVTLVDTSQISIDKSLKFAEKLLAKDVLKQRISQEHADETRLLLSTSTSMDSLSNVDFVIEAIPEIPTLKFSIFEK 150
                 68****************988****************************************************************************** PP

                 HHCCS-TTSEEEE--SSS-HHHHCCCSSSGGG.......EEEEEE-SSTTT--EEEEEE-TT--HHHHHHHHHHHHHTT-EEE CS
     3HCDH_N 100 lekiakpdailasnTSslsiselaealkrper.......viglHFfnPpplmkLvEvvrgekTseetvatvvelakkigktpv 175
                 l+ki+ +++ila+nTSs+si+++a+a++ ++        vig+HF+nP+p+ k vE+++g +Ts++t++t+ el+k+++k p 
  KHJ35038.1 151 LAKICASHTILATNTSSISITRIASATSLNSTdsetcsrVIGTHFMNPVPIQKGVEIISGLQTSQKTLDTALELCKAMEKIPS 233
                 *************************99633222233444*****************************************985 PP

>> 3HCDH  3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.9   0.0   4.3e-37   1.9e-33       1      97 []     240     336 .]     240     336 .] 1.00

  Alignments for each domain:
  == domain 1  score: 114.9 bits;  conditional E-value: 4.3e-37
                 TTTHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHTTTHGGHH-HHHHHHHHTT--BGGGTBSSSBC CS
       3HCDH   1 GFvvnRvlapllneavrlveegvaspediDaamrlglGlpmGpfelldlvgldvakkilevlaeelgerayapsplleklveagrlgrktgkgfyky 97 
                 GF++nR+l+p++neav ++e gv s e iD +m++g+++pmGp++l+d +g+d++++i++vl+ee g+++y+ps ll+++v ag lg+k+gkgfy+y
  KHJ35038.1 240 GFIANRILMPYINEAVICLETGVSSREYIDDIMKNGTNVPMGPLKLADFIGIDTCYAIMKVLYEEMGDSKYRPSVLLKNMVAAGWLGKKSGKGFYEY 336
                 9**********************************************************************************************98 PP

>> NAD_binding_2  NAD binding domain of 6-phosphogluconate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   2.5e-05      0.11       2      96 ..      52     170 ..      51     185 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 2.5e-05
                    EEEE--SHHHHHHHHHH.HHTT-EEEEE-SSHHHHHHHHHTT.......................EEE-SSHHHHHHHCSEEEE-SSSHHHHHHHH CS
  NAD_binding_2   2 igfiGlGvMGsnmalnl.lkagykvavynrtkekveelvaeg.......................akaaesieelvasldvvitmvkagkavdevi 73 
                    +g++G+G+MG  + l   +ka++ v++++ ++ ++++ ++                         +  +++  + ++++d+vi  +++ +  +  i
     KHJ35038.1  52 LGIVGVGQMGLGIGLVAaQKAKIPVTLVDTSQISIDKSLKFAekllakdvlkqrisqehadetrlLLSTSTSMDSLSNVDFVIEAIPEIPTLKFSI 147
                    79***********998736999*********97777776665566778899999998888887765556666677777799999999999999888 PP

                    HS.HCCC--TT-EEEE-S---HHH CS
  NAD_binding_2  74 eg.llealkkgdilidgstssped 96 
                    ++ l++ +++  +++ + tss++ 
     KHJ35038.1 148 FEkLAKICAS-HTILATNTSSISI 170
                    8845555544.4444444444444 PP

>> UDPG_MGDP_dh_N  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   2.2e-05     0.097       2      47 ..      51      97 ..      50     144 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 2.2e-05
                    EEEEE--STTHHHHHHHHHHCT.SEEEEE-S-HHHHHHHCTTS-SS- CS
  UDPG_MGDP_dh_N  2 kisviGlGYvGlvtaavlaeig.hevigvDideekvdklnsgkipiy 47
                    ++ ++G G +Gl  ++v a++  + v++vD ++  +dk  +   ++ 
      KHJ35038.1 51 RLGIVGVGQMGLGIGLVAAQKAkIPVTLVDTSQISIDKSLKFAEKLL 97
                    789****************99989************97443333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      495  (0.0276089); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2383.43
//
Query:       KHJ35039.1  [L=599]
Description: putative homeobox domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.5e-17   62.5   3.4      6e-17   61.2   3.4    1.7  1  Homeodomain  Homeodomain
  ------ inclusion threshold ------
      0.058   13.3   0.1       0.13   12.2   0.1    1.6  1  Homeobox_KN  Homeobox KN domain


Domain annotation for each model (and alignments):
>> Homeodomain  Homeodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.2   3.4   6.7e-21     6e-17       2      57 .]     180     236 ..     179     236 .. 0.97

  Alignments for each domain:
  == domain 1  score: 61.2 bits;  conditional E-value: 6.7e-21
                  T-SSSS-HHHHHHHHHHHHHSSS-SHHHHHHHHHHH.TS-HHHHHHHHHHHHHHHHH CS
  Homeodomain   2 rkRttftkeqleeLeklFeenrypsaeereeLAkkl.gLeerqVkvWFqNrRakekk 57 
                   kR ++t++q++ L ++F+++ +p+a++re+L++++ gL+ rqV+vWFqNrRak k+
   KHJ35039.1 180 MKRFRLTHQQTRFLMSEFAKQAHPDAAHRERLSREIpGLSPRQVQVWFQNRRAKIKR 236
                  6899**************************************************997 PP

>> Homeobox_KN  Homeobox KN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   1.5e-05      0.13      10      39 ..     202     232 ..     197     233 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.5e-05
  Homeobox_KN  10 YPseedKeeLlkeT.glsvkqitnWFINaRr 39 
                   P+++ +e+L +e  gls +q++ WF N R+
   KHJ35039.1 202 HPDAAHRERLSREIpGLSPRQVQVWFQNRRA 232
                  6999999999998559************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (599 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4365.83
//
Query:       KHJ35040.1  [L=460]
Description: hypothetical protein EV44_g1498 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.4e-15   54.5   1.0    6.6e-14   51.8   1.0    2.1  1  Retrotran_gag_2  gag-polypeptide of LTR copia-type


Domain annotation for each model (and alignments):
>> Retrotran_gag_2  gag-polypeptide of LTR copia-type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.8   1.0   3.7e-18   6.6e-14       2     132 ..      74     220 ..      73     225 .. 0.90

  Alignments for each domain:
  == domain 1  score: 51.8 bits;  conditional E-value: 3.7e-18
  Retrotran_gag_2   2 kkkdakalalIvlsisdsllelvkeek....takevWdkLkelyekksaankltlrkklfslkmkegesvadhinkleelvneLsa........ 83 
                      + +++ a+++I++ +sd+l elv +++    +a+ + + Lk+ y  +++++ ++l k++ +lkm+eg+s+++hi+++e++ + + +        
       KHJ35040.1  74 NDRNDVAHSAILSGVSDDLQELVCSCDeeleSARVAMRLLKDKYDYETTTSTIQLFKEFSELKMAEGDSISHHITQFETAYSHIYSrcsgstrp 167
                      678999*****************988533337999***************************************************9*999999 PP

  Retrotran_gag_2  84 ....lgvkid.dedkvvllLasLPesyetfvtaiesseedltleevieklleee 132
                          l   ++ ++ kv +l  sLP+sy+++++++ + +e+l++ +v  +ll+ +
       KHJ35040.1 168 eaiaLRNFLSvEQVKVMYLFLSLPASYNNIIDNLTT-KETLRFADVNRRLLDLN 220
                      999966655525669*******************99.9************9866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (460 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       777  (0.0433376); expected 358.6 (0.02)
Passed bias filter:                      518  (0.0288917); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3240.48
//
Query:       KHJ35041.1  [L=643]
Description: putative manganese transporter smf1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.7e-76  255.4  12.0    1.6e-75  254.4  12.0    1.4  1  Nramp     Natural resistance-associated macrophage protein


Domain annotation for each model (and alignments):
>> Nramp  Natural resistance-associated macrophage protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  254.4  12.0   8.7e-80   1.6e-75       4     351 ..     189     566 ..     187     570 .. 0.93

  Alignments for each domain:
  == domain 1  score: 254.4 bits;  conditional E-value: 8.7e-80
       Nramp   4 dlqaGaqfGykLlwvlllstllaillqelsarLGlvTgkglaelirerlpkkvsillwilaelaiiatdlaeviGaAialnllf.gipllvgvlitavl 101
                 +++aGa+f + Ll + l+s+l+ i++  l+++LG +Tg +lae++r  lp++++i+l+++ae+ iiatd++ev+G++ia++ll+ ++pl +++ + +++
  KHJ35041.1 189 NVTAGATFRFRLLYMGLISNLFSIFYHGLCVKLGSITGLNLAEACRTFLPRWLNIILYVIAEVSIIATDVTEVVGTGIAVSLLLpKVPLQLACALSILD 287
                 789************************************************************************************************ PP

       Nramp 102 vllllfl.....ekggyrklEaliialvlvialsFiaelflvk.pdwgevlkglvvPslpg..keslllavgilGatvmphnlflhsslvqerkitidr 192
                 v+++ ++     + +g r +E++++alv+ ++ +F ++l ++k p++gevl+g + P  +   ++ l+ a gilG t mph l+l s l+q r ++ d 
  KHJ35041.1 288 VIFIRIVsgpdgKLKGLRAFEFFVMALVMGVVTCFCIQLCIIKsPNVGEVLSGYI-PAGELlqPQGLFQACGILGSTLMPHSLYLGSGLIQPRLKQFDI 385
                 ****999333333578***********************988769********99.**99999****************************99977655 PP

       Nramp 193 .....................seke....ealkyeriDtiial.ivaflinlailivaAavlysggkdvesledaaeaLepllGskaasvlFaigLlaa 265
                                      s       + ++++  ++ii l i+a+++n+aili+a + ly++ ++ ++l++++++L+  +G +aa ++Fa +Ll +
  KHJ35041.1 386 dnglipsepdlsrkdrrvykpS--LdainTCMRVFITEVIICLfIFALFVNSAILIIAGSSLYETPGSNADLFGIHDVLSTTVG-PAAGTIFACALLLS 481
                 88*******9987666665542..1556677888899******899*****************888889***************.7************* PP

       Nramp 266 GlsStitgtlagqyvmegflglrislwlrrlitralafvpalivilligaelelvkllvlsqvllslllPfaliplllltsskklM 351
                 G s++i++tlagq++ +g+++ ++s+wlrrl+tra++ +p +i++ ++g ++   ++l ++qvllslllPf+++pl+++ts  + M
  KHJ35041.1 482 GGSAAIVCTLAGQMISSGAVHGNVSPWLRRLLTRAVSTMPSIIIASMSGRQGL-DNILDAAQVLLSLLLPFVIAPLIYFTSLDRFM 566
                 ***************************************************99.9**************************99988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (643 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1182  (0.0659267); expected 358.6 (0.02)
Passed bias filter:                      581  (0.0324056); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.42
# Mc/sec: 4641.48
//
Query:       KHJ35042.1  [L=816]
Description: putative metallo-beta-lactamase superfamily protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-87  293.1   0.6    1.6e-87  292.6   0.6    1.2  1  CPSF73-100_C   Pre-mRNA 3'-end-processing endonuclease polyad
    2.7e-29  101.7   0.0    6.6e-29  100.4   0.0    1.7  1  Beta-Casp      Beta-Casp domain
      1e-18   68.1   0.7    1.8e-18   67.3   0.7    1.4  1  Lactamase_B    Metallo-beta-lactamase superfamily
    7.9e-16   58.1   0.1    1.4e-15   57.3   0.1    1.4  1  Lactamase_B_6  Metallo-beta-lactamase superfamily domain
      2e-12   46.9   0.1    4.9e-12   45.6   0.1    1.7  1  RMMBL          Zn-dependent metallo-hydrolase RNA specificity
    5.7e-05   23.1   0.0    0.00017   21.5   0.0    1.8  1  Lactamase_B_3  Beta-lactamase superfamily domain
    0.00051   19.6   0.3     0.0013   18.2   0.3    1.7  1  Lactamase_B_2  Beta-lactamase superfamily domain


Domain annotation for each model (and alignments):
>> CPSF73-100_C  Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  292.6   0.6   6.2e-91   1.6e-87       1     217 []     529     813 ..     529     813 .. 0.93

  Alignments for each domain:
  == domain 1  score: 292.6 bits;  conditional E-value: 6.2e-91
  CPSF73-100_C   1 qlvsGvLVqkdfklsllapeDLreytgLstttitqkqrlpls.asiellkwaleqlfgdveeleekekkk......................tllvm 74 
                   qlv+GvLVq+dfk+sl+apeDLrey+gL+tttit+kqr++ls a+iel+kwale++fg++eel e++  k                      ++lvm
    KHJ35042.1 529 QLVTGVLVQNDFKMSLMAPEDLREYAGLTTTTITCKQRMTLSaAGIELIKWALEGTFGNIEELGEEKLIKtnneddsmnnskkqiekdikvtSYLVM 625
                   68***************************************99******************5555554445555556666667777777777***** PP

  CPSF73-100_C  75 gcvtvrveskgeveleWesnllnDmiADsviavllsvesspasvkrsskkhshshkekleeknshaklskeerlerllllLeaqFGedk..vielpk 169
                   gcvtvr++++ge+eleWe+n+lnD+iAD+++avl+sve spa++k+ss+khshsh++kl++++ ha+ls++erlerl+++LeaqFG d+  +i++pk
    KHJ35042.1 626 GCVTVRHHNNGELELEWEGNVLNDGIADAIMAVLFSVECSPAAIKQSSQKHSHSHSHKLPARHIHANLSPTERLERLFMFLEAQFGIDNiaPITVPK 722
                   **************************************************************************************99966666555 PP

  CPSF73-100_C 170 e...........................................pvpgvevkvdkkeakidletleVecesevlkdrveavveravetvap 217
                                                               pvpgve++vdk++ak++le+leVec+s+vl +rv+ vverave++ap
    KHJ35042.1 723 LnssiiapsknikpeddtdeashaeseqrnaerveierlhkigiPVPGVEIRVDKNVAKVWLEDLEVECTSRVLLERVRGVVERAVEVTAP 813
                   57789************************************************************************************98 PP

>> Beta-Casp  Beta-Casp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.4   0.0   2.6e-32   6.6e-29       1     110 []     260     395 ..     260     395 .. 0.85

  Alignments for each domain:
  == domain 1  score: 100.4 bits;  conditional E-value: 2.6e-32
                 HHHHHHHH..HCTT..TTS-S-EEEEE-HHHHHHHHHGGGGGGE-SHH....HHH.H....HH................................HS-S CS
   Beta-Casp   1 aqellylLeelwkekkledlklpiyldsplaskatevYkeyaeveakslewmesk.ke..eln................................sskg 64 
                 aqell++L+e+w ++++  +k+piy++s+la+k++ vY++y       + +m+++ k+  + +                                ++ g
  KHJ35042.1 260 AQELLLILDEYWGRHPE-LQKIPIYYASNLARKCMLVYQTY-------VGAMNDNiKRlfR-ErmaeaeastdskvkggpwdfkyirslknldrfDDVG 349
                 7***********99984.4559*******************.......4455555432221.1344556778888899999999999999999997789 PP

                 SEEEEES-TTSSSSHHHHHHHHHTTSTTSEEEESS---TTSHHHHH CS
   Beta-Casp  65 pkvilassgmlegGrsrellkklledprntvilvgyqaegTlgrkl 110
                  +v+las+gml++G+srell+++++  +n vi++gy++egT+++++
  KHJ35042.1 350 SCVMLASPGMLQNGVSRELLERWAPSDKNGVIITGYSVEGTMAKHI 395
                 9******************************************987 PP

>> Lactamase_B  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.3   0.7     7e-22   1.8e-18       4     162 ..      35     204 ..      32     253 .. 0.93

  Alignments for each domain:
  == domain 1  score: 67.3 bits;  conditional E-value: 7e-22
                  CSSEEEEEEETTCEEEES--SCHHHHHHHHHHHHHTSGGGGEEEEE-SBSSHHHHTTGGGCTTHHCCEETCCEHHHHCCHCHHHHHHHHHCCHH.... CS
  Lactamase_B   4 dpvnsyliegdggviLiDtGtsteaaraalelaalglkpkdvdavilTHlHlDHiGglgglveatdvpvgavaeeapalfmeeaddaasrkgll.... 97 
                  ++ ++ +++ +g++++ D+G ++ ++ +a+++++ ++++  v+ ++++H+H+DH++ l+++ ++t+++ ++   +  + ++ ++ ++++r g+     
   KHJ35042.1  35 VGRSCHILQYKGKTVMLDAGQHAGYEGLASLPFYDDFDLSTVEVLLISHFHVDHAASLPYVLSKTNFKGRVFMTHPTKAIYKWLIQDSVRVGGVssts 132
                  6789********************************************************************************************** PP

                  .......TTCHCGCCEEEEETTTEECCCTEEEEEHECTTSTSCCEEEEEETTCCEEEECTTTSSHHCCCCCC CS
  Lactamase_B  98 .......lagvsadkpdvdeeeldgnaggrralyvtggpghghghgvveygggkvlftGDallagetgridl 162
                         +   +++  ++ +  ++ ++ ++r ++ + g++ g+  + +e+ g k+ ftGD + + ++ +i+ 
   KHJ35042.1 133 qpvyteaDHLSTFPLIEAIDYYTTHTVSSIRITPYPAGHVLGAAMFLIEIAGLKIFFTGDYSREDDRHLISA 204
                  *******9999*****************************************************99999988 PP

>> Lactamase_B_6  Metallo-beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.3   0.1   5.4e-19   1.4e-15       1     189 [.      41     218 ..      41     221 .. 0.87

  Alignments for each domain:
  == domain 1  score: 57.3 bits;  conditional E-value: 5.4e-19
  Lactamase_B_6   1 lLeldnvkiLlDvGwdeskvslesalkelekv.iptvdliLLshatlehlGayallyakfksklllnipvyatlpvvkLGrvslldlyaskgllgp 95 
                    +L++ + +++lD G++   ++   +l ++++  ++tv++ L+sh  ++h +++++++ k       + +v+ t+p++++ + +++d+++  g++ +
     KHJ35042.1  41 ILQYKGKTVMLDAGQHAG-YEGLASLPFYDDFdLSTVEVLLISHFHVDHAASLPYVLSKT----NFKGRVFMTHPTKAIYKWLIQDSVRVGGVSST 131
                    68889999*******986.455567778887669******************99999764....35799*******************99999755 PP

  Lactamase_B_6  96 edseeleledideafdkiktlkYsQklelkskldgltitaynaGhtlGGtiWkiskesekivYavdwnhakeshLngaalldssgkvleqllrp 189
                     +    +  d    f  i+++ Y  +++++s    + it+y aGh+lG++++ i+    ki +  d++ + ++hL +aa+ +  g  ++ l+++
     KHJ35042.1 132 SQ-PVYTEADHLSTFPLIEAIDYYTTHTVSS----IRITPYPAGHVLGAAMFLIEIAGLKIFFTGDYSREDDRHLISAAVPK--GVKIDVLITE 218
                    54.5577889999*************99986....*****************************************999864..6666666655 PP

>> RMMBL  Zn-dependent metallo-hydrolase RNA specificity domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6   0.1   1.9e-15   4.9e-12       2      52 ..     428     482 ..     427     493 .. 0.85

  Alignments for each domain:
  == domain 1  score: 45.6 bits;  conditional E-value: 1.9e-15
       RMMBL   2 ipvkarieeidfSgHadknellelirklkprnvilvHGeeeatsalarll....k 52 
                 ip++++i+e++f +H d  e +e+i+ +  + vilvHGe+  + +l+++l    +
  KHJ35042.1 428 IPRRCSIQELSFAAHVDGVENREFIEEIAAPVVILVHGEQHNMMRLKSKLlslnA 482
                 89***********************************************944442 PP

>> Lactamase_B_3  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   6.8e-08   0.00017       6     133 ..      36     216 ..      34     225 .. 0.64

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 6.8e-08
  Lactamase_B_3   6 ghnsflletagarilvDPfkanlgyeppa..........eeaDlvlisqaledHahletlkql......................aenvkvleege 69 
                    g ++  l+ +g+++++D ++ ++gye  a           +++++lis+ + dHa+  +                          +         +
     KHJ35042.1  36 GRSCHILQYKGKTVMLDAGQ-HAGYEGLAslpfyddfdlSTVEVLLISHFHVDHAASLPYVLSktnfkgrvfmthptkaiykwliQ---------D 121
                    889**************987.677776667789999999***************98654433256777777775555444444440.........4 PP

  Lactamase_B_3  70 slevggleiravatsh...........................dav.ggsergenngflleqdgltiyhlGhlahelsseel....kelgrvDvvl 133
                    s++vgg++ ++ + ++                           ++   g++ g   +fl+e +gl+i++ G+ + e +   +     +  ++Dv++
     KHJ35042.1 122 SVRVGGVSSTSQPVYTeadhlstfplieaidyytthtvssiriTPYpAGHVLG-AAMFLIEIAGLKIFFTGDYSREDDRHLIsaavPKGVKIDVLI 216
                    45555555555444444444444444444444444444443332221344445.79*****************98644433311112223566666 PP

>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.2   0.3   5.2e-07    0.0013      27     149 ..      72     199 ..      48     227 .. 0.65

  Alignments for each domain:
  == domain 1  score: 18.2 bits;  conditional E-value: 5.2e-07
                    -..SEEEEE-SS--HHHHGGGGCCCCC--EEEEEEEEHHHHH........HCCTTCGHHHCHTT........TTEEEEEE-TTSEEEECSTTEEEE CS
  Lactamase_B_2  27 elppidaVllthaHyDHlaglltlrelrpkklplyapkgvla........vleanfvylaleee........pavnvheldwgesfelgdggleit 106
                    +l+ ++++l++h H+DH a l+ +   ++ k +++ +  + a         ++ ++v   +++          +  ++ +d  +++++    ++it
     KHJ35042.1  72 DLSTVEVLLISHFHVDHAASLPYVLSKTNFKGRVFMTHPTKAiykwliqdSVRVGGVSSTSQPVyteadhlsTFPLIEAIDYYTTHTVS--SIRIT 165
                    577899*****************999444344566665555544455555333333333333325544344555555666666666665..56677 PP

                    EEEE-EE--CTCCE-TTTSEEEEEECTTEEEEEESS-S---HH CS
  Lactamase_B_2 107 atparhksgrrldrnagdtlGlriegggkrvyyigDtgyipee 149
                    + pa h  g          + ++ie +g +++++gD  + +++
     KHJ35042.1 166 PYPAGHVLGA---------AMFLIEIAGLKIFFTGDYSREDDR 199
                    7777777776.........99***************9876633 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (816 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      493  (0.0274974); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.64u 0.29s 00:00:00.93 Elapsed: 00:00:00.41
# Mc/sec: 6006.82
//
Query:       KHJ35043.1  [L=642]
Description: putative tpa inducible protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-37  129.3   1.9    1.7e-30  106.7   1.1    2.4  2  TAF4      Transcription initiation factor TFIID component TAF
  ------ inclusion threshold ------
       0.22   10.3   0.3       0.41    9.4   0.3    1.3  1  MtaB      Methanol-cobalamin methyltransferase B subunit
        1.9    8.7   6.1         16    5.7   1.1    3.0  2  IRK_N     Inward rectifier potassium channel N-terminal


Domain annotation for each model (and alignments):
>> TAF4  Transcription initiation factor TFIID component TAF4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.9   0.0   4.1e-08   0.00025       3      73 ..     164     292 ..     162     301 .. 0.83
   2 !  106.7   1.1   2.9e-34   1.7e-30      69     274 ..     335     630 ..     320     633 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 4.1e-08
        TAF4   3 DvlasaGVdLkeEeerLlqss.........................................................akeasrvseavravvrsekee 44 
                 Dvl  +GVdL+eEe++ +q +                                                         a  a  + ++++++++ ++++
  KHJ35043.1 164 DVLGGTGVDLREEEQYTFQLYndsfnsmlsgshsgnislshsftqfpphdeasffgsgpanvigekvdsisqdeyiqkA--ADIAWREAARNLHISRQR 260
                 99*************988555888***************************************************8542..333444444555544444 PP

        TAF4  45 ....pfLqknpLqkklaeiakkeglksidpDvl 73 
                     pfL+ + +++kl++ a+++g+ + + D  
  KHJ35043.1 261 eldnPFLHVHLVHAKLRKLASEHGI-ELNTDSK 292
                 4567*********************.6666655 PP

  == domain 2  score: 106.7 bits;  conditional E-value: 2.9e-34
        TAF4  69 dpDvlellSlAveerLrgLltklivlskhRrrgekskkrte.......................................................... 109
                   D l+llS+A++ rLrgL+++++ l+k Rr+g +     e                                                          
  KHJ35043.1 335 LVDQLALLSIATKHRLRGLVEDAVKLAKGRRTGSHGIIAEEwkdiaapfdfegssivrndsvrmgwkssvspksnslkrphpkdeklvtpvmsnnnnli 433
                 568899**************************877664433999******************************************************* PP

        TAF4 110 ...sltsdvrkqLrelaqkekeeeekrqakRieereglekaak......drskgedeeekklkaketakevq.keedekarhraANatAlaavg..... 193
                    ++t++v  +Lr+ a ke+e ee r ++R+e + g+ ++++       ++++++e  +k++ k+ +k+ +  + +e+a+h aAN+t ++ +g     
  KHJ35043.1 434 gsgKITNEVIIALRRQALKEREAEEGRLKRRLERASGTSTSSRqasivsTPGSVAPETVEKMTTKKDLKKKAeARVSEAASHAAANVTTAQFLGsgsgl 532
                 ********************************6666555444422244456788899999998887777766699**********************98 PP

        TAF4 194 eprkKkyswmsagsgsgggksgaskssssggkgl.kgk.sgviserG................knglrlrerergkritlrDllaaLEqerrtsksall 274
                   +kKkyswm+++  sgg++s a  ss+++ k+      s++i ++G                + g+  ++re+g +++lrD++ +LE+++ ++ +al 
  KHJ35043.1 533 FGKKKKYSWMNPTPVSGGSNSFAGGSSNTQRKTGsGHSvSTTIVSSGisnispverltvegsrRLGTWREDREKGAGVQLRDWITVLENDGHEK-KALQ 630
                 778899******988777777666555555553322234666666667777777777777775556677788*******************998.5555 PP

>> MtaB  Methanol-cobalamin methyltransferase B subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.3   6.9e-05      0.41      22     105 ..     423     511 ..     420     524 .. 0.74

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 6.9e-05
        MtaB  22 kPvkaklgleiGaGtvvpeinva....preeseeskeklvkeyekit..tdileravelglPavvlEtEhvqqmtenpewgaevakaqke 105
                 +Pv  +++  iG+G+++ e+ +a    + +e e++  +l ++ e+    ++  ++a  + +P+  +  E+v++mt+++++ ++  + + e
  KHJ35043.1 423 TPVMSNNNNLIGSGKITNEVIIAlrrqALKEREAEEGRLKRRLERASgtSTSSRQASIVSTPG-SVAPETVEKMTTKKDLKKKAEARVSE 511
                 79*******************996544444555666678888877651034445566677777.6789**********998887766655 PP

>> IRK_N  Inward rectifier potassium channel N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   1.1    0.0027        16      23      40 ..      87     105 ..      84     111 .. 0.78
   2 ?    4.0   0.3    0.0094        56      25      41 ..     549     565 ..     542     567 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0027
       IRK_N  23 tlalvNGfgnGki.htrrk 40 
                 t++  NG++n +i h++ +
  KHJ35043.1  87 TTPYTNGHSNTNIsHSQTQ 105
                 78999********976655 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.0094
       IRK_N  25 alvNGfgnGkihtrrkt 41 
                 ++ N+f  G+++t+rkt
  KHJ35043.1 549 GGSNSFAGGSSNTQRKT 565
                 789*************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (642 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       888  (0.0495287); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.23s 00:00:00.85 Elapsed: 00:00:00.40
# Mc/sec: 4828.83
//
Query:       KHJ35044.1  [L=803]
Description: putative abc transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.5e-24   86.4   0.0    4.8e-24   85.4   0.0    1.4  1  ABC_tran         ABC transporter
    7.9e-14   51.6  15.5    7.9e-14   51.6  15.5    1.6  2  ABC2_membrane    ABC-2 type transporter
    3.8e-07   29.5  14.6    6.2e-07   28.8  14.6    1.3  1  ABC2_membrane_3  ABC-2 family transporter protein
  ------ inclusion threshold ------
      0.012   15.5   0.0      0.023   14.6   0.0    1.3  1  RsgA_GTPase      RsgA GTPase
       0.15   12.1   0.0       0.29   11.2   0.0    1.4  1  Dynamin_N        Dynamin family


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.4   0.0   1.3e-27   4.8e-24       7     137 .]     237     381 ..     233     381 .. 0.94

  Alignments for each domain:
  == domain 1  score: 85.4 bits;  conditional E-value: 1.3e-27
                 EEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH................HHHTCHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx................xxxxxxxxxx RF
    ABC_tran   7 klkegekvaivGenGaGKStLlkllagllkpteGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvren................esdeeiekal 89 
                 ++++g+++a++G +GaGK+++++l++g+l+ t Gei  + ++ +    +++++ ig++pq++ l  eltvren                e +++++ ++
  KHJ35044.1 237 HIEKGSIWAVMGASGAGKTSFFNLIMGKLNHTGGEIYANRAPCNI---SKFKRLIGFVPQDDILMAELTVRENimhnarvrlastwtddELKAHVDLLI 332
                 699*********************************777777766...99********************************999887777777***** PP

                 HHSTTGGTTCBGESTTS.GGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  90 sklglkelkdtvvkssp.ssLSgGqkqrvalarallkkpkllllDEpta 137
                 s lgl+++++++v++   s++SgGq++rv++ + l+ +p  ++lDEpt+
  KHJ35044.1 333 SCLGLSHVQNNIVGDYVkSNISGGQRKRVSIGMELVAAPMAVFLDEPTS 381
                 *************99989*****************************96 PP

>> ABC2_membrane  ABC-2 type transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6  15.5   2.2e-17   7.9e-14       2     207 ..     528     746 ..     527     749 .. 0.86
   2 ?   -4.3   0.8       2.7   9.8e+03      27      56 ..     773     795 ..     764     797 .. 0.48

  Alignments for each domain:
  == domain 1  score: 51.6 bits;  conditional E-value: 2.2e-17
  ABC2_membrane   2 qikallkreflqrwrdpslgllwrliqplllalvfgtvfgnlgnsedglnr........................pgllffsvlflafsaltsvap 73 
                    q++ +l r+++q+wr+ +++  + ++   + +l++g+  + l+  +    +                        +gl++ + + la sa+ +v  
     KHJ35044.1 528 QVRFCLTRSLRQQWRQMTSF-SLEIAVGAIAGLLIGLSLFPLQ--N----IyfqgiylppfqllssavnytlvpqIGLFCCLSISLA-SAAPGV-K 614
                    8999*************999.99**************999543..2....12234678899999999999***76666666666666.555555.* PP

  ABC2_membrane  74 vferergvlerelvsplyslsayvlakvlvelpvsllqalifllivyflvgldlsrfflflllllltalaasslgllisalapsfedasqlaslvl 169
                    +f  e+ v+ re +++  s+say+++k+l+ lp++l+ al +++++ +l   +  +f+ ++l  l+++ ++ +l+ ++s++++  ed+ ++++lv 
     KHJ35044.1 615 TFGEEKQVYWREASTGS-SRSAYYAGKTLSTLPRILISALHYTVFFNLL-AAPFMSFWRLYLCNLMYFYCIYGLASIMSMIVRR-EDGPLMSMLVS 707
                    *****************.**************************99888.444445999********************99977.89999****** PP

  ABC2_membrane 170 lpllllsGffipidsm.pkwlqwiaylnPltyavealrs 207
                    l+  ++sG+  p++s+ +  l w+ +l+P  +++ea+  
     KHJ35044.1 708 LIVSVFSGYGPPLSSVkQWHLEWFWRLCPGIWYTEAFYD 746
                    ****************545689**************976 PP

  == domain 2  score: -4.3 bits;  conditional E-value: 2.7
  ABC2_membrane  27 iqplllalvfgtvfgnlgnsedglnrpgll 56 
                    +  +l++  +g+++        ++++ gl+
     KHJ35044.1 773 VVDVLFMYAIGSIYR-------VIAFFGLI 795
                    444444444444444.......22344444 PP

>> ABC2_membrane_3  ABC-2 family transporter protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.8  14.6   1.7e-10   6.2e-07     144     344 ..     570     791 ..     498     796 .. 0.80

  Alignments for each domain:
  == domain 1  score: 28.8 bits;  conditional E-value: 1.7e-10
  ABC2_membrane_3 144 ninvestql..eeel.snvasflvg.liliilifitasfiavsi...veEkesrikelqlvsgvsplqywlskilgdflvyllqlllilll..a 228
                      ni ++ + l  ++ l s v+++lv+ + l+++++i+++++a ++    e  e+++  +  ++g s+++y+ +k l+++   l+++l ++++  +
       KHJ35044.1 570 NIYFQGIYLppFQLLsSAVNYTLVPqIGLFCCLSISLASAAPGVktfGE--EKQVYWREASTGSSRSAYYAGKTLSTLPRILISALHYTVFfnL 661
                      44444444455333415566667779************99999874344..555666667**************************99997699 PP

  ABC2_membrane_3 229 fglgipfgnlglllllfllfglayialgyllsslfknsetaqilifivilllsgffgglfpledlpsa.lkwifsiiPffapglgllrli.... 317
                      ++   pf++++ l l+ l+++ ++  l+  +s ++++++   ++ ++v+l+ s+f+g+  pl+++  + l w+ ++ P  ++++++++      
       KHJ35044.1 662 LA--APFMSFWRLYLCNLMYFYCIYGLASIMSMIVRREDGP-LMSMLVSLIVSVFSGYGPPLSSVKQWhLEWFWRLCPGIWYTEAFYDQFlkpl 752
                      99..********************************98665.5799999999999999999****965388888899***********986776 PP

  ABC2_membrane_3 318 ..tgdplwe..............illsliilalfavvylllal 344
                         +    +              +  +++++++++ +y ++a+
       KHJ35044.1 753 vyLY----DikaaeistsivrerFVVDVLFMYAIGSIYRVIAF 791
                      5532....23445577788888877777777777777777765 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.6   0.0   6.5e-06     0.023      98     130 ..     240     272 ..     217     277 .. 0.86

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 6.5e-06
                  TTSEEEEECSTTSSHHHHHHHHCTT-----S-- CS
  RsgA_GTPase  98 kdktsvlvGqSGvGKStLinallpelelktgev 130
                  k+++ +++G SG+GK+++ n ++++l+   ge+
   KHJ35044.1 240 KGSIWAVMGASGAGKTSFFNLIMGKLNHTGGEI 272
                  458899******************999888887 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   8.1e-05      0.29       2      40 ..     245     283 ..     245     353 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 8.1e-05
                 EEEEBTTTTHHHHHHHHHTS--S---SSS---S-EEEEE CS
   Dynamin_N   2 avvGsqSsGKSSvlnaLlgedilprgpnptTrrplelql 40 
                 av+G+  +GK+S+ n ++g+     g++   r+p+ +++
  KHJ35044.1 245 AVMGASGAGKTSFFNLIMGKLNHTGGEIYANRAPCNISK 283
                 799*****************9888889999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (803 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       685  (0.0382063); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        69  (0.00384851); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.69u 0.29s 00:00:00.98 Elapsed: 00:00:00.44
# Mc/sec: 5472.10
//
Query:       KHJ35045.1  [L=505]
Description: putative fad binding domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-12   47.1   0.0    3.2e-12   46.3   0.0    1.3  1  FAD_binding_4  FAD binding domain


Domain annotation for each model (and alignments):
>> FAD_binding_4  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.3   0.0   1.8e-16   3.2e-12      13     138 ..      11     134 ..       6     135 .. 0.87

  Alignments for each domain:
  == domain 1  score: 46.3 bits;  conditional E-value: 1.8e-16
                    HHHHHHHHHHCTSCEEEESSSTTEE.STTCSCCEEEEEETTS--EEEEETTTTEEEEETTSBHHHHHHHHHHHTTECSSGGGTTCGSBHHHTTTTT CS
  FAD_binding_4  13 vaaalrlaneaglpvlvrGgGssll.gqavatggvvldlsrlnrileideeegtatveaGvtlgdlvealaakglllglepgsgipgtvGGaiatn 107
                    +a+++r   e++ +++v  g ++ +   +   +  v++l+ l ++leid+e++++ ve+ v++++l ea+ + gl+ ++ ++     tvGG  ++ 
     KHJ35045.1  11 IARTIRGFYERKEKWRVDHGSTNSTrPTD--VKKSVVQLDSLSNVLEIDPERKVCMVEPNVPMDRLIEATLKFGLMPPVVMEFP-GITVGGGYSGT 103
                    67777777888888888777788885555..5788899988*****************************999****9877765.56********* PP

                    -EETTEEGG--HHGTEEEEEEEETTSEEEEE CS
  FAD_binding_4 108 agGygsekyGlirdnvlglevvladGevvrl 138
                     g + s k+G +  ++ ++e++la+Gev+ +
     KHJ35045.1 104 CGESSSFKHGFFDRTINSVEMILATGEVISI 134
                    ****************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3418.75
//
Query:       KHJ35046.1  [L=182]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       719  (0.0401026); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1380.95
//
Query:       KHJ35047.1  [L=545]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (545 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       687  (0.0383178); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.53u 0.22s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 4236.08
//
Query:       KHJ35048.1  [L=407]
Description: hypothetical protein EV44_g4755 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0031   17.5   0.6      0.025   14.6   0.1    2.1  2  EPO_TPO   Erythropoietin/thrombopoietin


Domain annotation for each model (and alignments):
>> EPO_TPO  Erythropoietin/thrombopoietin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.1     0.022   3.9e+02      35     129 ..     153     243 ..     143     247 .. 0.69
   2 !   14.6   0.1   1.4e-06     0.025      31      84 ..     316     368 ..     300     381 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.022
     EPO_TPO  35 nvtvpttkvnleewkkkeeeekaqevwqgltlLseavlkaqallanssqsslllqlhidkavsnlrSlrallrlLgtqesvPdassaaplrTvtv 129
                 ++     +v++      ++e   + +  + + Ls++  +a   +++ s +    ++h + a+s+l+   +  + +++q   P+   ++  +T+++
  KHJ35048.1 153 TIKTSRSDVSFSRCISPTIERYREGIYRASQALSKTDDTA--RVRTRS-KHSYKKYHRNDATSHLQNSWKQSGYISIQAQKPPR-HQESCQTAQH 243
                 4667778888888888888888888888888888884443..344444.34668999999999998777778888888855544.3677777776 PP

  == domain 2  score: 14.6 bits;  conditional E-value: 1.4e-06
     EPO_TPO  31 slsenvtvpttkvnleewkkkeeeekaqevwqgltlLseavlkaqallanssqs 84 
                 +l +++    +k+nl++ ++ ++++  ++v++++ +L++ +++++++l+n + +
  KHJ35048.1 316 ELCIAIGRMYVKFNLGATNHIKTQQNLRDVSKAISILNKNIKAGGQSLRNMV-N 368
                 67777778889**************************************998.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (407 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       829  (0.0462379); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.37
# Mc/sec: 3334.72
//
Query:       KHJ35049.1  [L=1479]
Description: putative ras gtpase activating protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.3e-46  155.5   2.6    3.7e-45  153.4   2.6    2.3  1  RasGAP_C        RasGAP C-terminus
    8.9e-45  153.0   0.4      3e-44  151.2   0.4    2.0  1  RasGAP          GTPase-activator protein for Ras-like GTPase
    2.3e-12   47.1   0.0    7.8e-12   45.3   0.0    2.0  1  CH              Calponin homology (CH) domain
    2.5e-07   29.9  23.7        1.6    8.7   0.3    8.4  8  IQ              IQ calmodulin-binding motif
  ------ inclusion threshold ------
        0.2   11.9   0.6       0.91    9.8   0.0    2.6  3  CDC24           CDC24 Calponin
        3.2    7.9   5.3         12    6.1   0.3    3.6  4  Acetyltransf_6  Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> RasGAP_C  RasGAP C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.4   2.6   1.2e-48   3.7e-45       1     137 []    1297    1436 ..    1297    1436 .. 0.98

  Alignments for each domain:
  == domain 1  score: 153.4 bits;  conditional E-value: 1.2e-48
    RasGAP_C    1 lvelkkkalenlkeLeelgvisrennyqellneIakdirnkgrlrekrkeElesleetlktLseknnylesqlesYkayienvleqlkkkkgk...l 94  
                  +++lk++alen+++Le+lg+isr+n yq++ln+Ia dirnk+r+r +r +Ele ++ tl++ +e  + lesq +sY++yie+++  l+kk ++   +
  KHJ35049.1 1297 YKDLKRTALENVLKLEQLGRISRQNFYQDILNAIALDIRNKSRRRVQRHRELEGVRLTLANSNEEAEWLESQRKSYDNYIEQAMISLQKKGKNlflM 1393
                  889***************************************************************************************7669*** PP

    RasGAP_C   95 pfskqyfkkrelkksgklpkfgsykysakqLeekgVLleiegl 137 
                  pfskqy ++rel++sg++pkfgs+kys++ L +kgVL++++g+
  KHJ35049.1 1394 PFSKQYNHERELERSGRKPKFGSFKYSTHTLFDKGVLVSWKGY 1436
                  ****************************************985 PP

>> RasGAP  GTPase-activator protein for Ras-like GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.2   0.4     1e-47     3e-44       2     207 ..     889    1095 ..     888    1096 .. 0.98

  Alignments for each domain:
  == domain 1  score: 151.2 bits;  conditional E-value: 1e-47
      RasGAP    2 iseliklElessenpndllrsnsvvsklleeytkrpegqeyLkkilkpllqkil.ekedlnlelDPrkiyeelkkkkesktgkksessgkksekeas 97  
                  +++  k+E++s+ ++++ lr+n +++++l++yt++p+ +++L+++l+p++q  +  ++ l+le+DP++iy + ++++e +tg+ s++++++++++a+
  KHJ35049.1  889 MTRSAKEEVDSAVSIKESLRGNFIWTRILANYTRSPRDRRFLRELLGPFIQASIiGDPTLDLESDPMQIYCSVISNEELRTGQASHRPIDITREQAI 985 
                  567889*********************************************9877****************************************** PP

      RasGAP   98 elekvsqmleknldkLkelvneildsIfksleqlPvgiRiickqirekvkekfpdaseeeilnligsflflrfliPaivnPklfglvdkqiseeqrr 194 
                  +++++++ ++++l++L+e+v+ +l s+ + ++++P+giR++c+qi + + ++f  +s++ +l+ +g++l+  +l  a+++P   g++++q+++  +r
  KHJ35049.1  986 KDTETRELFINHLRDLREIVDDFLLSLESLVNKMPYGIRFVCQQIFQAIFQRFSCESQQLLLQTVGNWLWKIYLQLAFLAPVITGIIERQMTPLLKR 1082
                  *********************************************************9999************************************ PP

      RasGAP  195 nLtliaKllqnla 207 
                   L++iaK+l +++
  KHJ35049.1 1083 ILSEIAKVLNQIS 1095
                  ***********97 PP

>> CH  Calponin homology (CH) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.0   2.6e-15   7.8e-12       6     105 ..     269     368 ..     265     372 .. 0.88

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 2.6e-15
                 HHHHHHHHHHTTSTTSSTTSCHHHHHTTSHHHHHHHHHHSTTTSSGGGSTTT...HHHHHHHHHHHHHHHHHHTTCHTTSS.-HHHHHTTSHH.HHHHH CS
          CH   6 ellrWinshleeagpkvkvedfeedlrDGvlLckLlnklapglvdkkklnks...efkkleNinlaldvaekklgvpkvli.eaedlvegknk.svltl 99 
                 e+ +Wi+++l++ +p   + ++ee lrDGv L++++  l+p++  k ++ +    ++++ +Ni++++ +++ ++ +p++   e +dl+e+kn+ +v+ +
  KHJ35049.1 269 EAKEWIEKVLQRPIP--PIVQLEEVLRDGVTLAEIVVTLRPDK--KIRIFRHpklQYRHSDNIATFFRFLA-DVELPDLFRfELTDLYEKKNTpKVIYC 362
                 6789******98655..568*********************99..4444333679****************.*************************** PP

                 HHHHHH CS
          CH 100 laqLfr 105
                 +++L++
  KHJ35049.1 363 IHALSW 368
                 ***987 PP

>> IQ  IQ calmodulin-binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1      0.78   2.3e+03       5      13 ..     480     488 ..     480     494 .. 0.77
   2 !    8.7   0.3   0.00054       1.6       5      19 ..     506     520 ..     502     521 .. 0.84
   3 ?    0.1   0.0      0.33   9.9e+02       5      19 ..     536     550 ..     533     552 .. 0.89
   4 !    5.1   0.0     0.008        24       7      18 ..     568     579 ..     563     582 .. 0.86
   5 !    5.5   0.3    0.0058        17       3      18 ..     594     609 ..     592     611 .. 0.87
   6 !    6.2   0.2    0.0035        11       3      19 ..     624     640 ..     622     642 .. 0.90
   7 !    7.8   0.4    0.0011       3.3       5      21 .]     656     672 ..     656     672 .. 0.92
   8 !    6.3   0.0    0.0033       9.9       3      16 ..     698     711 ..     696     716 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.78
                 HHHHHHHHH CS
          IQ   5 ikIQaawRG 13 
                 i +Q+ +RG
  KHJ35049.1 480 IYFQSIIRG 488
                 568*****9 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00054
                 HHHHHHHHHHHHHHH CS
          IQ   5 ikIQaawRGylaRkr 19 
                 + +Q+ +RG+l+R r
  KHJ35049.1 506 TSLQSIVRGFLTRHR 520
                 779**********87 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.33
                 HHHHHHHHHHHHHHH CS
          IQ   5 ikIQaawRGylaRkr 19 
                 i++Q  +R   +R +
  KHJ35049.1 536 ITLQNLIRSKTVRSK 550
                 89********99987 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.008
                 HHHHHHHHHHHH CS
          IQ   7 IQaawRGylaRk 18 
                 +Qa++RG+l  +
  KHJ35049.1 568 FQAQIRGFLIQR 579
                 8********987 PP

  == domain 5  score: 5.5 bits;  conditional E-value: 0.0058
                 HHHHHHHHHHHHHHHH CS
          IQ   3 aaikIQaawRGylaRk 18 
                 ++  +Qaa+RG+  R+
  KHJ35049.1 594 SISYLQAAIRGMSSRR 609
                 67789*******9998 PP

  == domain 6  score: 6.2 bits;  conditional E-value: 0.0035
                 HHHHHHHHHHHHHHHHH CS
          IQ   3 aaikIQaawRGylaRkr 19 
                 ++ +IQa  R+  +R++
  KHJ35049.1 624 SIKTIQASARAVIVRRN 640
                 7899***********98 PP

  == domain 7  score: 7.8 bits;  conditional E-value: 0.0011
                 HHHHHHHHHHHHHHHHH CS
          IQ   5 ikIQaawRGylaRkryk 21 
                 i IQ+  RG + R++++
  KHJ35049.1 656 ISIQSILRGNQSRQQFQ 672
                 67*************96 PP

  == domain 8  score: 6.3 bits;  conditional E-value: 0.0033
                 HHHHHHHHHHHHHH CS
          IQ   3 aaikIQaawRGyla 16 
                  ++kIQ+++R  l+
  KHJ35049.1 698 KVVKIQSFVRSRLQ 711
                 689*******9987 PP

>> CDC24  CDC24 Calponin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0    0.0003      0.91       2      76 ..     284     356 ..     283     370 .. 0.74
   2 ?   -2.9   0.0       2.8   8.3e+03      52      72 ..    1149    1169 ..    1144    1174 .. 0.82
   3 ?   -4.2   0.1         6   1.8e+04      44      56 ..    1462    1474 ..    1456    1475 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.0003
       CDC24   2 PvtqlwkllrqGspLlalfNalkpeeklevdevksddlkvcKksvydFllackkeLgfedeelftisdlfsedtt 76 
                 P+ ql ++lr G  L  +  +l+p++k+++ ++ + + + +   +  F    +++++++d   f ++dl++++ t
  KHJ35049.1 284 PIVQLEEVLRDGVTLAEIVVTLRPDKKIRIFRHPKLQYRHSD-NIATFF-RFLADVELPDLFRFELTDLYEKKNT 356
                 999***************************665555555543.344444.3456889999999999999976433 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.8
       CDC24   52 ackkeLgfedeelftisdlfs 72  
                   +k +L ++ +++f+i  l++
  KHJ35049.1 1149 KVKPTLYIKMDDIFAIHKLIE 1169
                  5788899999*****998876 PP

  == domain 3  score: -4.2 bits;  conditional E-value: 6
       CDC24   44 ksvydFllackke 56  
                  k v++Fl++++k 
  KHJ35049.1 1462 KEVFKFLESVLKY 1474
                  6799***999875 PP

>> Acetyltransf_6  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0       0.1   3.1e+02       9      44 ..     823     858 ..     818     867 .. 0.88
   2 ?   -1.3   0.1      0.74   2.2e+03      28      63 ..     894     935 ..     873     940 .. 0.64
   3 ?    6.1   0.3    0.0039        12       4      35 ..    1335    1366 ..    1333    1409 .. 0.70
   4 ?   -3.3   0.0         3   8.9e+03      89     108 ..    1424    1443 ..    1422    1445 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.1
  Acetyltransf_6   9 rkrrkleelgevrfrvatdpedleallelfraqwar 44 
                     ++r+kle+  ++ f++ t+p  l++l+   r+q ++
      KHJ35049.1 823 SSRKKLESYQQLFFTLQTQPHYLARLFKHIRQQGTA 858
                     6899***********************999988655 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.74
  Acetyltransf_6  28 pedleallelfraqwarr......pdvfadpltraflrdlla 63 
                      e+++ ++  ++++++         ++ ++p+ r+flr+ll 
      KHJ35049.1 894 KEEVDSAVSIKESLRGNFiwtrilANYTRSPRDRRFLRELLG 935
                     555555555554442222333447788999*********986 PP

  == domain 3  score: 6.1 bits;  conditional E-value: 0.0039
  Acetyltransf_6    4 Rknlrrkrrkleelgevrfrvatdpedleall 35  
                      R++ rr+ ++ +el++vr+++a + e++e+l 
      KHJ35049.1 1335 RNKSRRRVQRHRELEGVRLTLANSNEEAEWLE 1366
                      8999************************9973 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 3
  Acetyltransf_6   89 lrsgdrlyywlggydpelak 108 
                      l ++++l  w+g  d++++k
      KHJ35049.1 1424 LFDKGVLVSWKGYTDRDWDK 1443
                      78999***********9987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1479 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       870  (0.0485247); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.82u 0.24s 00:00:01.06 Elapsed: 00:00:00.40
# Mc/sec: 11197.25
//
Query:       KHJ35050.1  [L=192]
Description: hypothetical protein EV44_g4253 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-06   28.0   0.1    1.9e-06   27.7   0.1    1.0  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase
  ------ inclusion threshold ------
       0.12   12.2   0.1       0.57   10.0   0.0    2.0  2  PulG      Type II secretory pathway pseudopilin


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   0.1   2.2e-10   1.9e-06      60     207 ..      13     169 ..      11     187 .. 0.78

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 2.2e-10
       RVT_2  60 ldsvrLlla.laaeeelvv..hqldvdsafLnaeldee..vyvkqPpGfeidreeekvykLnkslyGlkqapllWnekidk.vLkklgferseaesGly 152
                 ++  rL++a +aa+ +  v     d+   +L++    +  +  + Pp  +    ++   ++ k lyG+  +++ W+++ +k  ++kl++  s+    l 
  KHJ35050.1  13 YEKSRLVIAvIAACLQNSVklKLRDITQVYLQSRTVVQryILAQLPPQLQQKFLPDTTLHVIKPLYGVAESGVHWFTTYQKhHIEKLNMVTSTYDPCLL 111
                 566788877357776665511456*******99755552477788*******************************9987626899******9999887 PP

       RVT_2 153 v.rgtg.egk.livalyvddlliagsdikiledvkkelakkfklkdlgkvskfLGiei 207
                 + ++++ +++  iv++  dd li++++    ++  k  ++kf+ k   ++s  + +++
  KHJ35050.1 112 ItKSDSiDSRfGIVGMQTDDTLIVANSEFSAKEQEKIEKAKFDTKAKQTLSSDMPLNF 169
                 6255553455569************999999998888899999998777776666655 PP

>> PulG  Type II secretory pathway pseudopilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.18   1.6e+03      30      42 ..      89     101 ..      85     105 .. 0.84
   2 ?   10.0   0.0   6.4e-05      0.57      28      77 ..     139     190 ..     132     192 .] 0.81

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.18
        PulG  30 taeelkkqEvlnv 42 
                 t+++++++E+ln+
  KHJ35050.1  89 TTYQKHHIEKLNM 101
                 578999*****97 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 6.4e-05
        PulG  28 kktaeelkkqEvlnvalmAvqtkqde..LslNGvevtikktqeeisvyedgk 77 
                 +  a+e++k+E+    + A qt   +  L++NG  v i ++ ++i +y++g+
  KHJ35050.1 139 EFSAKEQEKIEKAKFDTKAKQTLSSDmpLNFNGYTVAIDSSIGSIKMYQKGQ 190
                 55688999999999999999998776225789************99999886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.41u 0.21s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1556.91
//
Query:       KHJ35051.1  [L=172]
Description: hypothetical protein EV44_g4260 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       298  (0.0166211); expected 358.6 (0.02)
Passed bias filter:                      275  (0.0153383); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1294.35
//
Query:       KHJ35052.1  [L=420]
Description: putative glycoside hydrolase family 18 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.1e-86  288.8   2.1    8.3e-86  288.5   2.1    1.0  1  Glyco_hydro_18  Glycosyl hydrolases family 18


Domain annotation for each model (and alignments):
>> Glyco_hydro_18  Glycosyl hydrolases family 18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  288.5   2.1   4.6e-90   8.3e-86       2     312 .]      35     379 ..      34     379 .. 0.94

  Alignments for each domain:
  == domain 1  score: 288.5 bits;  conditional E-value: 4.6e-90
                     EEEEEEGGGGGSS.G.C..SHTTTESEEEEEEEEEEETTTEEEESS.TTHH.................HHHHHHHHHHHHTSTT-EEEEEEEETT CS
                     xxxxxxxxxxxxx.x.x..xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxx.................xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18   2 vvgYysswesygn.n.y..lpsaklthiiyaFakidgengkvvvsd.wedl.................gnfeqlkklkkkknpgvkvllsiGGwt 74 
                      v+Y+ +w+ y++      lp++klthi+yaFa++ +e+g+v ++d w+d                  g+++ql+ lk +kn+ +kvllsiGGwt
      KHJ35052.1  35 SVAYFVNWAIYARkHkPqdLPAQKLTHILYAFANVRPETGEVYLTDlWADQdihfdgdswndpgqnlyGCLKQLNLLK-QKNRSLKVLLSIGGWT 128
                     699********7744435699*********************************************************.**************** PP

                     TTTHHHHHHTSHHHHHHHHHHHHHHHHHCT-SEEEEEES-TTTSTCHHHHHHHHHHHHHHHHH.HHHH..HTSTTCEEEEEEESSHHHHHHHCHH CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxx..xxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18  75 dssgfslaastdasrkkfadsvvsllrkygfDGiDidweypggnpedkenytallkelreald.kaka..tegkkllLsaavpasasdlskgydl 166
                     +s++fs+ ast+  rkkfads+ +ll +ygfDGiDidwe+p++  +d++n ++ll+ +re ld  a +  + ++++lL++a +a++++++++ d+
      KHJ35052.1 129 YSANFSKPASTSVGRKKFADSALDLLMNYGFDGIDIDWEFPQA-GADAQNCVLLLQTVRETLDsYA-StlSSKPHFLLTVACSAGPVNINNM-DV 220
                     *****************************************88.777****************554.4599*****************9999.** PP

                     HHHHHHTSEEEEETTTSSSTTSSBE--SS-SSB.....T..CSSHHHHHHHHHHTT--GGGEEEEEESEEEEEEESSSSSS........TSTTTE CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....x..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxx RF
  Glyco_hydro_18 167 pkiakylDyvnvmtYDfhgswdnvtghhaplyd.....a..slnvdeavkeylkagvpakklvlGvpfygrawalvsgadn........tkeegv 246
                     +++ +ylD+ n+m+YDf gs+  +tgh+a+l+      a   +++++av+ y ++gv+++k+vlG+p ygra+++++g ++         +e+g+
      KHJ35052.1 221 TNMDRYLDFWNLMAYDFAGSFTANTGHQANLFPspsnpAstPFSIQAAVDLYKQKGVSSSKIVLGMPLYGRAFENTDGLGKpysgvgdgSWENGI 315
                     *********************************98765167********9999*********************999844466667777****** PP

                     EEHHHHHHHHTEEEEEEEEETTTTEEEEEETT..EEEEE-SHHHHHHHHHHHHHTTESEEEEETGGGS CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18 247 lsykelkellkkakakrkydskakapyvydge..efvsyDdpksikakadyvkakglgGvmiWsldqD 312
                     ++yk l+      ++k++yd++a a+y yd++  ++vsyD+ +++k+ka ++k+++lgG m+W+ ++D
      KHJ35052.1 316 FDYKVLPIT----GSKEEYDQTAHASYSYDPTkrKLVSYDNVAMAKEKAGWIKSQNLGGGMWWESSGD 379
                     ****99985....999************************************************9988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       474  (0.0264376); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.27s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 2993.65
//
Query:       KHJ35053.1  [L=589]
Description: putative mitochondrial protein fmp25 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.2e-30  103.8   1.6    6.2e-07   29.9   0.0    7.4  6  RCC1      Regulator of chromosome condensation (RCC1) repeat
    1.9e-17   62.6  13.8    3.2e-10   39.5   0.0    6.9  7  RCC1_2    Regulator of chromosome condensation (RCC1) repeat


Domain annotation for each model (and alignments):
>> RCC1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0   0.00072       6.4       4      35 ..     124     155 ..     123     162 .. 0.82
   2 ?    2.2   0.0     0.031   2.8e+02      26      50 .]     255     277 ..     240     277 .. 0.79
   3 !   19.1   0.0   1.7e-07    0.0015      12      50 .]     296     341 ..     294     341 .. 0.79
   4 !   29.9   0.0   6.9e-11   6.2e-07       1      49 [.     344     402 ..     344     403 .. 0.80
   5 !   12.2   0.0   2.4e-05      0.22       5      49 ..     428     486 ..     426     487 .. 0.90
   6 !   21.6   1.4   2.8e-08   0.00025       4      33 ..     511     540 ..     510     586 .. 0.83

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00072
                 EEEEE--GGGTTSSSS---EEEEEE-GGGTTS CS
        RCC1   4 VysWGrndyGqLGlgttesvlvPtkveglsgn 35 
                 Vy+WG+n      + ++    +P++++ ++g+
  KHJ35053.1 124 VYAWGNNAGRVIENSNETYIKTPKRIPYFDGK 155
                 9****999888888888777889999998875 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.031
                 EEE-GGGTTS-EEEEEEETTEEEEE CS
        RCC1  26 PtkveglsgnrvvkvacGddhtval 50 
                 P+ +++ +  +++++++G  h+++l
  KHJ35053.1 255 PKNLRWGE--KIKDISSGLEHCLML 277
                 77777766..***********9976 PP

  == domain 3  score: 19.1 bits;  conditional E-value: 1.7e-07
                 GGTTSSSS-..--E.....EEEEE-GGGTTS-EEEEEEETTEEEEE CS
        RCC1  12 yGqLGlgtt..esv.....lvPtkveglsgnrvvkvacGddhtval 50 
                 +GqLG++    +++     + P ++ +l+g +++k+a Gd+h+++l
  KHJ35053.1 296 KGQLGIPGLtlQTKspgrfDEPYEIDSLKGFEISKIATGDYHSLVL 341
                 7*****444342223444488**********************986 PP

  == domain 4  score: 29.9 bits;  conditional E-value: 6.9e-11
                 TTEEEEEE--GGGTTSSSS-.--E..EEEEE-GGGTTS.......-EEEEEEETTEEEE CS
        RCC1   1 dGrVysWGrndyGqLGlgtt.esv..lvPtkveglsgn.......rvvkvacGddhtva 49 
                 +GrV+++G n+ GqLG  +t es   + P++ +  +         +++ +a+G++ +++
  KHJ35053.1 344 KGRVFTFGDNSVGQLGSEPTiESPtiDFPSLFSIEKLYngtkllpKITGIAAGGNNSFF 402
                 5*******************55554444*8885544335578899************97 PP

  == domain 5  score: 12.2 bits;  conditional E-value: 2.4e-05
                 EEEE--GGGTTSSSS-.--EEEEEE-GGGTTS.............-EEEEEEETTEEEE CS
        RCC1   5 ysWGrndyGqLGlgtt.esvlvPtkveglsgn.............rvvkvacGddhtva 49 
                 +s+G++  G LG+g   + + +Ptk++ lsg              r   ++ G+ h+ a
  KHJ35053.1 428 WSCGQGILGSLGNGRWtHVQGIPTKIKALSGLfeydeknkviipiRLARISVGQTHVSA 486
                 9*************99777799*******999999999999999999999999999876 PP

  == domain 6  score: 21.6 bits;  conditional E-value: 2.8e-08
                 EEEEE--GGGTTSSSS---EEEEEE-GGGT CS
        RCC1   4 VysWGrndyGqLGlgttesvlvPtkvegls 33 
                 V+ WG n+++qLG+g +++v+ P+ +++l+
  KHJ35053.1 511 VLWWGGNEHYQLGTGRRNNVSQPVYIQPLD 540
                 788*****************99*9998875 PP

>> RCC1_2  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.1   0.1    0.0048        43      20      26 ..     124     130 ..     107     132 .. 0.78
   2 ?    2.5   0.0     0.015   1.4e+02      10      25 ..     166     181 ..     164     184 .. 0.84
   3 !    3.6   0.0    0.0066        59       8      22 ..     206     220 ..     200     221 .. 0.78
   4 !   15.9   0.0   9.1e-07    0.0081       1      22 [.     264     285 ..     264     286 .. 0.96
   5 !   39.5   0.0   3.6e-14   3.2e-10       1      30 []     328     357 ..     328     357 .. 0.96
   6 ?   -0.3   0.0      0.11     1e+03       4      16 ..     393     405 ..     390     408 .. 0.80
   7 ?   -2.2   0.5      0.43   3.9e+03      20      30 .]     511     521 ..     508     521 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.0048
      RCC1_2  20 VlcWGsN 26 
                 V++WG+N
  KHJ35053.1 124 VYAWGNN 130
                 9*****9 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.015
      RCC1_2  10 HscaLtedGeVlcWGs 25 
                 +  a+te G++l WG 
  KHJ35053.1 166 FGAAITEQGDLLQWGT 181
                 6789********9996 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.0066
      RCC1_2   8 dyHscaLtedGeVlc 22 
                  +  ++L+++G+V++
  KHJ35053.1 206 KDRILGLSSSGKVYS 220
                 566799********8 PP

  == domain 4  score: 15.9 bits;  conditional E-value: 9.1e-07
      RCC1_2   1 VksvsaGdyHscaLtedGeVlc 22 
                 +k++s+G  H + Lt+ G++++
  KHJ35053.1 264 IKDISSGLEHCLMLTSKGRLYS 285
                 79******************98 PP

  == domain 5  score: 39.5 bits;  conditional E-value: 3.6e-14
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsNsdGQ 30 
                 + +++ GdyHs++L++ G+V+++G+Ns+GQ
  KHJ35053.1 328 ISKIATGDYHSLVLDNKGRVFTFGDNSVGQ 357
                 568**************************9 PP

  == domain 6  score: -0.3 bits;  conditional E-value: 0.11
      RCC1_2   4 vsaGdyHscaLte 16 
                 ++aG++ s++ +e
  KHJ35053.1 393 IAAGGNNSFFTVE 405
                 99****9998765 PP

  == domain 7  score: -2.2 bits;  conditional E-value: 0.43
      RCC1_2  20 VlcWGsNsdGQ 30 
                 Vl WG N++ Q
  KHJ35053.1 511 VLWWGGNEHYQ 521
                 666****9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (589 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       300  (0.0167327); expected 358.6 (0.02)
Passed bias filter:                      280  (0.0156172); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 4247.51
//
Query:       KHJ35054.1  [L=389]
Description: putative transmembrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-11   44.4  11.4    5.4e-07   30.0   3.4    2.9  3  EI24      Etoposide-induced protein 2.4 (EI24)


Domain annotation for each model (and alignments):
>> EI24  Etoposide-induced protein 2.4 (EI24)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.6   1.8   0.00095        17      89     131 ..      38      88 ..       5      98 .. 0.69
   2 !   17.0   1.1   3.1e-07    0.0055      18     134 ..      64     224 ..      59     231 .. 0.62
   3 !   30.0   3.4     3e-11   5.4e-07     107     177 ..     230     303 ..     220     303 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.00095
                 H.......HHHHHHHHHHHHHHHHHHH.HHTTHHH....HHHHHHHHHHHH CS
        EI24  89 a.......eslkslllllllllvllpl.liPvvglilsplllswltayfyc 131
                         + +k++++ + + + + +   +Pv+g+ + ++l+s+++ y+y+
  KHJ35054.1  38 RnpslltsRHYKQVAIAIACGIAIRIAiALPVLGIKVLLWLTSFVFDYEYV 88 
                 344455567889999999999966666444****99999999999998774 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 3.1e-07
                 HHHHHH.HHHHHHHHHHHHHHH.........-.............TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.H............ CS
        EI24  18 llllpl.llnlllfllllvlll.........w.............vllasllvllllllplwlfplvalllaapfygllaekvekrh............ 81 
                  ++lp+  + +ll+l      +         w             ++  + +++ l++++  ++p++  ++++ + ++ + + +k h            
  KHJ35054.1  64 AIALPVlGIKVLLWLT-----SfvfdyeyvsWshnvanglgfiqnSV--LQVPFFLMTVMRNITPTLDEMFMESLAWVDSTYYKK-Hegensasirngy 154
                 3333331334444443.....14445688886787778887665533..3368899999999999******************87.6466665555555 PP

                 ...H.................CCTTSHHHHHHHHHHHHHHHHHHHHH.HHTTHHH....HHHHHHHHHHHHHHH CS
        EI24  82 ...l.................glvkslaeslkslllllllllvllpl.liPvvglilsplllswltayfycfey 134
                    l                 +l k +  s k++ + ll+++    l   Pvvg+++ p ++++ + ++ ++  
  KHJ35054.1 155 yenLskyptrdiyaqpksaayKLKKLISWSSKKAGISLLIFI----LsYTPVVGQFVLPGASFYTFQKVIGLAP 224
                 444055444444444433332222223366666666665555....3333**************9999887765 PP

  == domain 3  score: 30.0 bits;  conditional E-value: 3e-11
                 HH.HH.TTHHH....HHHHHHHHHHHHHHHHHHHHHH...-HHHHHHHHHCTHHHHHHHHHHHHHHTTSCCHHCTH CS
        EI24 107 pl.li.Pvvglilsplllswltayfycfeyldlaagr...sleerrallerrrayflgfGllvslllliPllnllf 177
                  + ++ P   ++l+++l s++ +++++ e+l  ++ r   ++ ++++++ +r + ++gfG+ ++ll  iP+l++l+
  KHJ35054.1 230 GIgIFlPR--TFLVIFLQSYFASRNLMRELLEPYFCRirfTKTQKKNWFHDREGLLFGFGIGFYLLIRIPFLGVLI 303
                 33533484..89***********************88999*********************************985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      380  (0.0211947); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.26s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 2750.67
//
Query:       KHJ35055.1  [L=131]
Description: putative 60s ribosomal protein l32 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.6e-51  171.1   0.8    7.6e-51  171.1   0.8    1.8  2  Ribosomal_L32e  Ribosomal protein L32


Domain annotation for each model (and alignments):
>> Ribosomal_L32e  Ribosomal protein L32
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.2     0.061   1.1e+03      87      98 ..       2      13 ..       1      14 [. 0.90
   2 !  171.1   0.8   4.2e-55   7.6e-51       1     108 []      15     122 ..      15     122 .. 0.99

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.061
                    S-HHHHHHHHHH CS
  Ribosomal_L32e 87 Vsskkrkeiver 98
                    Vs+kk++ iv++
      KHJ35055.1  2 VSAKKHIPIVKK 13
                    9********997 PP

  == domain 2  score: 171.1 bits;  conditional E-value: 4.2e-55
                     ------TTTTT-TTS-SS------TT-TTTTT-TTS-----GGG---TTTTT--TTS-EEEEESSGGGGTT--TTTE..EEEE-TTS-HHHHHHH CS
  Ribosomal_L32e   1 tkkFirhqsdryvklkeswrkprGidnrvrrrfkgqilmpkiGYgspkktrgllpsGfkkvlVhnvkeLevllmenksyaaeiahsVsskkrkei 95 
                     tk+F+rhqsd y+ ++ swrkp+Gidnrvrrrf gqi+mp+iGYgs+kktr+++psG+k +lVhn++++e llm+nk++aaei+hsVss+kr++i
      KHJ35055.1  15 TKRFNRHQSDVYKCVDPSWRKPKGIDNRVRRRFAGQIAMPSIGYGSNKKTRHMMPSGHKAFLVHNMQDVELLLMHNKTFAAEISHSVSSRKRIDI 109
                     79********************************************************************************************* PP

                     HHHHHHTT-EBSS CS
  Ribosomal_L32e  96 verAaelgikVtN 108
                     v+rA+elg+kVtN
      KHJ35055.1 110 VQRAKELGVKVTN 122
                     ************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       591  (0.0329634); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1022.89
//
Query:       KHJ35056.1  [L=583]
Description: hypothetical protein EV44_g4765 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-25   88.0   0.1    1.2e-23   83.6   0.0    3.2  2  Inp1      Inheritance of peroxisomes protein 1
  ------ inclusion threshold ------
       0.45    9.8   3.6       0.75    9.1   3.6    1.2  1  DUF3523   Domain of unknown function (DUF3523)


Domain annotation for each model (and alignments):
>> Inp1  Inheritance of peroxisomes protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.6   0.0   1.3e-27   1.2e-23      56     137 .]      65     143 ..      29     143 .. 0.85
   2 ?   -2.8   0.5      0.64   5.7e+03      57      57 ..     270     270 ..     228     308 .. 0.57

  Alignments for each domain:
  == domain 1  score: 83.6 bits;  conditional E-value: 1.3e-27
        Inp1  56 AkgpLeIyripqsvafLsvGsivhpiLpklqvwrvddeeskfvlrienperywrIelpqeseeekelveeleevlskilqfe 137
                  +g L+Iyr+p+s+afL++ ++++piLp++q w+v d+ skfvl    p  +wrIelp++s++e+ +ve l+++l++il++e
  KHJ35056.1  65 EPGSLQIYRAPESIAFLNCQNAIRPILPRSQAWCV-DGGSKFVLGS--PPLFWRIELPKTSHDEEIRVEGLKRILDEILRYE 143
                 3577*******************************.7789****99..778******************************7 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 0.64
        Inp1  57 k 57 
                 +
  KHJ35056.1 270 P 270
                 1 PP

>> DUF3523  Domain of unknown function (DUF3523)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   3.6   8.3e-05      0.75      42     108 ..     243     315 ..     238     319 .. 0.66

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 8.3e-05
     DUF3523  42 skhakkalelikkqEetrqaElqakkkeyeaeleqlei.erkrveaeerrk.....tlqeetkqkqqraqyed 108
                 ++ a++ l l k +E+tr +El++ +  +e e  ++   ++ + e+e+  k     t q++ kq++  a y++
  KHJ35056.1 243 HQSAEEKLSLHKITEQTRSSELEKTQDPTEGENISISCsNKSHLEKENPEKsvqllTKQQNEKQHSLSASYDA 315
                 578999*****************99998887765555424555555555551111144455555555666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (583 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       823  (0.0459033); expected 358.6 (0.02)
Passed bias filter:                      288  (0.0160634); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.27s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3990.58
//
Query:       KHJ35057.1  [L=677]
Description: putative cue domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-11   41.5   0.1    1.6e-10   40.5   0.1    1.6  1  CUE       CUE domain


Domain annotation for each model (and alignments):
>> CUE  CUE domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.5   0.1   8.7e-15   1.6e-10       3      42 .]     351     390 ..     349     390 .. 0.96

  Alignments for each domain:
  == domain 1  score: 40.5 bits;  conditional E-value: 8.7e-15
                 HHHHHHHHHSTTS-HHHHHHHHHHCTTTHHHHHHHHHHCC CS
         CUE   3 qmletLkemFPdldeevIravLrasngnvEatinaLLegs 42 
                 + +++++e+FPdl++++I++ L +++ n+E++i+ +Legs
  KHJ35057.1 351 SLISQVQELFPDLGSGFISRILNEYDDNLEVVISHILEGS 390
                 579***********************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (677 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       688  (0.0383736); expected 358.6 (0.02)
Passed bias filter:                      503  (0.0280551); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.29s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4744.50
//
Query:       KHJ35058.1  [L=581]
Description: putative ccch zinc finger domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-07   30.8   3.5    3.5e-07   29.9   3.5    1.5  1  zf-CCCH    Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    8.4e-07   28.6   4.4    1.5e-06   27.8   4.4    1.4  1  zf-CCCH_4  CCCH-type zinc finger
      1e-06   28.6   8.8      2e-06   27.7   8.8    1.5  1  zf_CCCH_4  Zinc finger domain
    5.9e-06   26.2  13.2    5.9e-06   26.2  13.2    3.9  3  NupH_GANP  Nucleoporin homology of Germinal-centre associated
  ------ inclusion threshold ------
      0.021   15.3   1.8      0.021   15.3   1.8    1.9  2  zf-CCCH_2  RNA-binding, Nab2-type zinc finger
      0.048   14.4   0.1      0.097   13.4   0.1    1.5  1  Torus      Torus domain
      0.076   13.1   8.2      2e+02    2.1   7.2    4.0  2  Mustang    Musculoskeletal, temporally activated-embryonic nu
        2.1    8.2   6.1         28    4.6   6.1    2.2  1  Collagen   Collagen triple helix repeat (20 copies)


Domain annotation for each model (and alignments):
>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.9   3.5   1.6e-10   3.5e-07       5      26 ..       4      24 ..       2      25 .. 0.95

  Alignments for each domain:
  == domain 1  score: 29.9 bits;  conditional E-value: 1.6e-10
                CBCHHHHHS--TTGGG-SSBSC CS
     zf-CCCH  5 lCrffmrtGyCkyGdrCkFaHg 26
                +C+++++ G+CkyGd+C++ Hg
  KHJ35058.1  4 ICKYWQQ-GHCKYGDTCRYDHG 24
                8******.*************8 PP

>> zf-CCCH_4  CCCH-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   4.4   6.8e-10   1.5e-06       2      21 ..       4      23 ..       3      24 .. 0.95

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 6.8e-10
   zf-CCCH_4  2 lCpyfakGsCrfGdnCrFsH 21
                +C+y+++G C++Gd Cr+ H
  KHJ35058.1  4 ICKYWQQGHCKYGDTCRYDH 23
                7******************9 PP

>> zf_CCCH_4  Zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   8.8   8.8e-10     2e-06       1      19 []       5      23 ..       5      23 .. 0.99

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 8.8e-10
   zf_CCCH_4  1 CkfflqGtCkkGdkCrFaH 19
                Ck+++qG Ck+Gd Cr+ H
  KHJ35058.1  5 CKYWQQGHCKYGDTCRYDH 23
                *****************99 PP

>> NupH_GANP  Nucleoporin homology of Germinal-centre associated nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0  12.6   0.00045         1       9      83 ..     164     233 ..     155     233 .. 0.67
   2 !   26.2  13.2   2.6e-09   5.9e-06      32      93 ..     206     267 ..     199     267 .. 0.90
   3 !   12.2  35.0   4.8e-05      0.11      29     177 ..     233     396 ..     233     475 .. 0.46

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00045
   NupH_GANP   9 qqpgaFqassssskgtfqskppf.rFgQpslFGqnntgsgkspgFsqvssFgqtsgvsqsssgqtlgfgqtsgfgl 83 
                  q+ga ++s  s+++  +s p+f +FgQps FG++ +   k +  +q s Fg+++  +q s     +fg++s+fg+
  KHJ35058.1 164 TQSGAQSSSLISALTLDSSTPAFsVFGQPSGFGEPLVF-AKLSTVGQPSVFGKPTALGQPS-----AFGKPSAFGQ 233
                 67888777777888888889988459999999988776.5555566666666666665555.....5666665553 PP

  == domain 2  score: 26.2 bits;  conditional E-value: 2.6e-09
   NupH_GANP  32 rFgQpslFGqnntgsgkspgFsqvssFgqtsgvsqsss.gqtlgfgqtsgfglssaleqtpsf 93 
                   gQps+FG+++ + g+ ++F++ s+Fgq+s+ +q s+ g+ +++gq+s+fg+ sa +q ++f
  KHJ35058.1 206 TVGQPSVFGKPTAL-GQPSAFGKPSAFGQPSVFGQPSVfGKPTALGQPSAFGQPSAFGQPSAF 267
                 679***********.9999*******************9**************9998887665 PP

  == domain 3  score: 12.2 bits;  conditional E-value: 4.8e-05
   NupH_GANP  29 ppfrFgQpslFGqnntgs.....gkspgFsqvssFgqtsgvsqsss.gqtlgfgqtsgfglssaleqt.......psfvasspssssvpsnqgfsFksp 114
                 +p++FgQps+FG+++ ++     g+ ++F+q s+Fgq+s  +q s+ g+  ++gq+s+fg+ ++l+q+       +s+ +   +ss v  n+  s  s+
  KHJ35058.1 233 QPSVFGQPSVFGKPTALGqpsafGQPSAFGQPSAFGQPSAFGQPSVfGKPAALGQASAFGQPTSLGQKinpfakvTSGPGPPIQSSGVLRNPQDSLAST 331
                 356666666666666653222333333334444444444444444444444555555555544444431100000333333223445666666666666 PP

   NupH_GANP 115 sslgassst.stfg..qesgevassgfgkseFsFkpaenavFkPIfgaesepektqsqitsgsFtF 177
                  s++    +    g  +++++ + +g+   + s k+a+   F   +  +  + k+ +++ s+  +F
  KHJ35058.1 332 ESINKTLNPfEKAGidSSRNQSSPNGILGNQKSSKSANLEKFESTLIVNDVQGKPSTTTKSNL-SF 396
                 544332221122221123333444566666666677777777777777777777666666664.44 PP

>> zf-CCCH_2  RNA-binding, Nab2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.3   1.8   9.2e-06     0.021       1      18 []       4      24 ..       4      24 .. 0.96
   2 ?   -3.6   0.1         8   1.8e+04      12      15 ..     408     411 ..     407     412 .. 0.59

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 9.2e-06
   zf-CCCH_2  1 pCrffpn..C.tnpkCpFaHP 18
                +C+++    C +++ C++ H+
  KHJ35058.1  4 ICKYWQQghCkYGDTCRYDHG 24
                8*******************6 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 8
   zf-CCCH_2  12 kCpF 15 
                  C+F
  KHJ35058.1 408 TCSF 411
                 5777 PP

>> Torus  Torus domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   4.3e-05     0.097      72      91 ..       4      23 ..       1      36 [. 0.90

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 4.3e-05
                B-HHHHHT--SSGGG-SSB- CS
       Torus 72 fClfFarGlCakGkkCeylH 91
                +C ++ +G C++G  C+y H
  KHJ35058.1  4 ICKYWQQGHCKYGDTCRYDH 23
                8*****************99 PP

>> Mustang  Musculoskeletal, temporally activated-embryonic nuclear protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   7.2     0.091     2e+02      48      75 .]     210     238 ..     154     301 .. 0.85
   2 ?   -3.0   0.0       3.6     8e+03      58      66 ..     541     549 ..     532     554 .. 0.78

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.091
     Mustang  48 PsvFskdr.tGqEtvfdkPkegppksvFg 75 
                 PsvF k    Gq ++f+kP +    svFg
  KHJ35058.1 210 PSVFGKPTaLGQPSAFGKPSAFGQPSVFG 238
                 77777766567777777777666666665 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 3.6
     Mustang  58 qEtvfdkPk 66 
                  Etv+d P 
  KHJ35058.1 541 AETVYDEPT 549
                 79****996 PP

>> Collagen  Collagen triple helix repeat (20 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   6.1     0.012        28       7      33 ..     244     270 ..     206     303 .. 0.48

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.012
                 XXXXXXXXXXXX-----XXXXEEEE-T CS
    Collagen   7 GepGppGppGkrGepGeaGekGekGpa 33 
                 G+p + G+p + G+p + G++ + G++
  KHJ35058.1 244 GKPTALGQPSAFGQPSAFGQPSAFGQP 270
                 222222222222222222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (581 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.63u 0.29s 00:00:00.92 Elapsed: 00:00:00.44
# Mc/sec: 3996.44
//
Query:       KHJ35059.1  [L=319]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       921  (0.0513693); expected 358.6 (0.02)
Passed bias filter:                      572  (0.0319036); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.28s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2426.76
//
Query:       KHJ35060.1  [L=605]
Description: putative ydr124wp-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-40  137.8   1.1    3.1e-40  137.1   1.1    1.3  1  DUF2841   Protein of unknown function (DUF2841)


Domain annotation for each model (and alignments):
>> DUF2841  Protein of unknown function (DUF2841)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.1   1.1   1.7e-44   3.1e-40       2     123 ..     210     353 ..     209     354 .. 0.96

  Alignments for each domain:
  == domain 1  score: 137.1 bits;  conditional E-value: 1.7e-44
     DUF2841   2 iedeeeveeyyerafkalqqlnckviakawikliepkkqvkypYnggektkPeWWPk.....evrhkePdhlkkeerirLlvhilrelaese....... 88 
                 i++e++v ++y  +fk++qq +ckv+ ka++kl+ep+kq+++pY+gg++++P+WWP       vrhkePdhl k+eri+Llvhil+++ e+        
  KHJ35060.1 210 IGNEADVDRFYYIRFKDMQQSSCKVMGKAFVKLVEPRKQTHHPYTGGNEKAPSWWPPtkgdnAVRHKEPDHLLKPERISLLVHILKMIIEPAerqnpti 308
                 89******************************************************999999**************************999999***** PP

     DUF2841  89 ...eitvekLeeatkev.......krqikpeerkeiLkeiykvak 123
                    +++v+kLee+t+ev       k++ ++  +k++Lkei++vak
  KHJ35060.1 309 rklGLNVKKLEETTMEVmsnwfndKEHPENLLKKKYLKEIFRVAK 353
                 *****************999998888888889999********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (605 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4672.67
//
Query:       KHJ35061.1  [L=73]
Description: hypothetical protein EV44_g3885 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       175  (0.00976072); expected 358.6 (0.02)
Passed bias filter:                      162  (0.00903564); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 530.40
//
Query:       KHJ35062.1  [L=520]
Description: hypothetical protein EV44_g2021 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.011   16.0   0.0      0.047   13.9   0.0    2.0  2  BTB       BTB/POZ domain


Domain annotation for each model (and alignments):
>> BTB  BTB/POZ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   2.6e-06     0.047      11      44 ..      44      80 ..      35     103 .. 0.80
   2 ?   -2.2   0.0      0.27   4.9e+03      81      95 ..     206     220 ..     187     225 .. 0.68

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.6e-06
                S-EEEEETT...TEEEEE-HHHHHHH-HHHHHHHTST CS
         BTB 11 cDvtlvvgd...gkefkahkavLaarSpyFkalftsk 44
                 Dv ++v++   + ++  h+++La +S++F a  +++
  KHJ35062.1 44 GDVEILVNTggkTNRYLLHRIILAQCSKFFLASTSNE 80
                589999998888899***************9998887 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.27
                 GGGHHHHHHHHHHHT CS
         BTB  81 eenleelLaaadllq 95 
                   + ++lL++adl++
  KHJ35062.1 206 YHQCKALLRLADLYD 220
                 456788999999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (520 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 3920.66
//
Query:       KHJ35063.1  [L=937]
Description: putative ankyrin repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.7e-13   48.6   5.9    4.4e-05   23.7   0.1    5.0  5  Ank_5           Ankyrin repeats (many copies)
    1.7e-12   47.6   2.9     0.0034   17.9   0.1    6.9  7  Ank_4           Ankyrin repeats (many copies)
    1.8e-11   44.5   0.5      2e-07   31.5   0.1    3.2  3  Ank_2           Ankyrin repeats (3 copies)
      1e-07   32.0   1.5      0.021   15.3   0.1    4.7  4  Ank             Ankyrin repeat
    1.7e-07   31.0   0.5        0.3   11.8   0.0    5.1  4  Ank_3           Ankyrin repeat
  ------ inclusion threshold ------
      0.085   12.8   0.2        0.2   11.6   0.2    1.6  1  OrfB_Zn_ribbon  Putative transposase DNA-binding domain


Domain annotation for each model (and alignments):
>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.26   7.7e+02      11      29 ..     264     282 ..     258     284 .. 0.84
   2 ?   -2.0   0.0       1.6   4.9e+03       8      21 ..     314     327 ..     311     328 .. 0.84
   3 !   16.8   0.1   2.1e-06    0.0062      14      54 ..     515     556 ..     509     558 .. 0.84
   4 !    5.8   0.0     0.006        18       1      21 [.     799     818 ..     799     820 .. 0.94
   5 !   23.7   0.1   1.5e-08   4.4e-05       1      49 [.     840     887 ..     840     891 .. 0.94

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.26
       Ank_5  11 rldgggntpLhvAakygaa 29 
                  +d++g+tp h  a y++ 
  KHJ35063.1 264 SPDKDGMTPAHALALYQRT 282
                 5799*******99999875 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1.6
       Ank_5   8 dvnrldgggntpLh 21 
                 +++ ld+ gnt +h
  KHJ35063.1 314 ALCILDPSGNTLIH 327
                 567899******99 PP

  == domain 3  score: 16.8 bits;  conditional E-value: 2.1e-06
       Ank_5  14 gggntpLhvAakygaadvvrlLl.argadlnltdsrGltald 54 
                  +gnt+Lh+ a +ga+  v++   +rg+d n+t+ +G+t l+
  KHJ35063.1 515 HFGNTVLHMLAARGASLDVIFEAlERGVDGNATNTSGQTFLH 556
                 579******999777777777777**************9776 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.006
       Ank_5   1 LlehgpadvnrldgggntpLh 21 
                 L+++g +++n++d+ gnt+L+
  KHJ35063.1 799 LISAG-VSLNNYDRAGNTVLM 818
                 78899.**************9 PP

  == domain 5  score: 23.7 bits;  conditional E-value: 1.5e-08
       Ank_5   1 LlehgpadvnrldgggntpLhvAakygaadvvrlLlargadlnltdsrG 49 
                 L+e+g a++ +++++g+t+Lh+A+k g+    r+Ll+ g++  +++s+ 
  KHJ35063.1 840 LIERG-ANIHWRNRHGETALHIAVKLGRKVATRILLETGSNVHARNSDE 887
                 89999.************************************9999985 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.29   8.8e+02      14      37 ..      78     101 ..      74     124 .. 0.85
   2 ?    1.2   0.0       0.2     6e+02      24      42 ..     262     277 ..     249     286 .. 0.72
   3 !   12.6   0.0   5.5e-05      0.16       2      40 ..     518     556 ..     517     558 .. 0.96
   4 ?    1.0   0.0      0.23   6.8e+02      10      41 ..     563     600 ..     556     607 .. 0.68
   5 ?    5.3   0.0      0.01        31      13      45 ..     792     823 ..     789     828 .. 0.91
   6 !   17.9   0.1   1.1e-06    0.0034      16      47 ..     836     866 ..     835     874 .. 0.86
   7 ?    0.6   0.0       0.3   9.1e+02      17      34 ..     870     886 ..     862     891 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.29
       Ank_4  14 lelvrlLlekgadinaqdnrsGet 37 
                 +++v +Ll+k + + + +nr+++t
  KHJ35063.1  78 VKTVNSLLDKQPRWLRPKNREDMT 101
                 68999***************9988 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.2
       Ank_4  24 gadinaqdnrsGetalhi.A 42 
                 +++    ++++G+t+ h  A
  KHJ35063.1 262 RIS----PDKDGMTPAHAlA 277
                 455....699******9833 PP

  == domain 3  score: 12.6 bits;  conditional E-value: 5.5e-05
       Ank_4   2 ltaLhyaai.sgrlelvrlLlekgadinaqdnrsGetalh 40 
                 +t+Lh++a+    l+++   le+g+d na+ n sG+t lh
  KHJ35063.1 518 NTVLHMLAArGASLDVIFEALERGVDGNAT-NTSGQTFLH 556
                 89*******999******************.********9 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.23
       Ank_4  10 i...sgrlelvrlLlekgad....inaqdnrsGetalhi 41 
                     +++ ++++++l+k       +n + +  G++ +h 
  KHJ35063.1 563 LrnfAEDSDTLMWILQKLNPynvkVNIC-DVFGRSFFHL 600
                 45556777999****7655533446666.7779999886 PP

  == domain 5  score: 5.3 bits;  conditional E-value: 0.01
       Ank_4  13 rlelvrlLlekgadinaqdnrsGetalhiAakr 45 
                 r+elv+ L++ g+++n   +r G+t l   +++
  KHJ35063.1 792 RHELVEKLISAGVSLNNY-DRAGNTVLMAFVQH 823
                 7899*************9.*******9988776 PP

  == domain 6  score: 17.9 bits;  conditional E-value: 1.1e-06
       Ank_4  16 lvrlLlekgadinaqdnrsGetalhiAakrgn 47 
                 l r+L+e+ga+i+ + nr GetalhiA+k g+
  KHJ35063.1 836 LFRYLIERGANIHWR-NRHGETALHIAVKLGR 866
                 569************.************8665 PP

  == domain 7  score: 0.6 bits;  conditional E-value: 0.3
       Ank_4  17 vrlLlekgadinaqdnrs 34 
                  r+Lle+g +++a+ n++
  KHJ35063.1 870 TRILLETGSNVHAR-NSD 886
                 699**********9.765 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       1.2   3.5e+03      24      36 ..     266     279 ..     248     289 .. 0.62
   2 !    9.3   0.0   0.00056       1.7      24      59 ..     514     557 ..     488     604 .. 0.83
   3 !   31.5   0.1   6.7e-11     2e-07      10      83 .]     793     884 ..     786     884 .. 0.78

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.2
       Ank_2  24 k.ngktaLhyAakn 36 
                 + +g+t+ h+ a +
  KHJ35063.1 266 DkDGMTPAHALALY 279
                 13788888855544 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00056
       Ank_2  24 k.ngktaLh.yAakngnleivklLleh......adndgrtpLhy 59 
                 + +g+t+Lh +Aa++ +l+++   le       ++ +g+t Lh+
  KHJ35063.1 514 DhFGNTVLHmLAARGASLDVIFEALERgvdgnaTNTSGQTFLHV 557
                 249******8888888999987777745555666688*****96 PP

  == domain 3  score: 31.5 bits;  conditional E-value: 6.7e-11
       Ank_2  10 lelvklLl.egadpn..k.ngktaLhyAakn...gnle.......ivklLleh......adndgrtpLhyAarsghleivklLlekgadinlkd 83 
                 +elv+ L+ +g+ +n  +  g+t+L++++++   g  e       + ++L+e        +++g+t+Lh+A++ g+  + ++Lle g+++++++
  KHJ35063.1 793 HELVEKLIsAGVSLNnyDrAGNTVLMAFVQHlkdG--EddktlakLFRYLIERganihwRNRHGETALHIAVKLGRKVATRILLETGSNVHARN 884
                 469*****999999865489**********75553..1233333368****955445566699*********99**8888899999*9999875 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0       0.5   1.5e+03       1      11 [.     268     282 ..     268     296 .. 0.76
   2 !    8.6   0.0   0.00088       2.6       2      22 ..     517     538 ..     516     549 .. 0.75
   3 ?    2.9   0.0     0.058   1.7e+02       2      28 ..     813     848 ..     812     852 .. 0.71
   4 !   15.3   0.1   7.1e-06     0.021       1      31 [.     853     884 ..     853     885 .. 0.89

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.5
                 TSBBHHH.HHH...H CS
         Ank   1 dGnTPLH.lAa...t 11 
                 dG+TP H lA    t
  KHJ35063.1 268 DGMTPAHaLALyqrT 282
                 8*****966555554 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00088
                 SBBHHH.HHHHHTTHHHHHHHH CS
         Ank   2 GnTPLH.lAatngkkriiklLL 22 
                 GnT+LH lAa+++++++i + L
  KHJ35063.1 517 GNTVLHmLAARGASLDVIFEAL 538
                 9*****99**999999995444 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.058
                 SBBHHHHHH...HHTT.......HHHHHHHH.TTTSTT CS
         Ank   2 GnTPLHlAa...tngk.......kriiklLL.hGAnln 28 
                 GnT+L+  +      +       +   ++L+ +GAn++
  KHJ35063.1 813 GNTVLMAFVqhlK--DgeddktlAKLFRYLIeRGANIH 848
                 9999998887540..2455556666888899889*987 PP

  == domain 4  score: 15.3 bits;  conditional E-value: 7.1e-06
                 TSBBHHHHHHHHTTHHHHHHHH.TTTSTTCBT CS
         Ank   1 dGnTPLHlAatngkkriiklLL.hGAnlnald 31 
                 +G T+LH+A+  g k  ++ LL  G+n++a++
  KHJ35063.1 853 HGETALHIAVKLGRKVATRILLeTGSNVHARN 884
                 69********8888888889**99******98 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       1.3   3.8e+03       1      15 [.     268     282 ..     268     285 .. 0.85
   2 !   10.7   0.0   0.00023      0.67       2      31 .]     517     546 ..     516     546 .. 0.91
   3 ?    1.7   0.0      0.19   5.6e+02      17      30 ..     836     848 ..     813     849 .. 0.82
   4 !   11.8   0.0   9.9e-05       0.3       1      30 [.     853     881 ..     853     882 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.3
       Ank_3   1 nGetpLhlAarsgnl 15 
                 +G+tp h  a+++++
  KHJ35063.1 268 DGMTPAHALALYQRT 282
                 69*****99998875 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00023
       Ank_3   2 GetpLh.lAarsgnleivkfLlenkgadvna 31 
                 G+t Lh lAar ++l+++   le +g+d na
  KHJ35063.1 517 GNTVLHmLAARGASLDVIFEALE-RGVDGNA 546
                 9*****999999999*9999999.9**9885 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.19
       Ank_3  17 ivkfLlenkgadvn 30 
                 + ++L+e +ga+++
  KHJ35063.1 836 LFRYLIE-RGANIH 848
                 689****.9**997 PP

  == domain 4  score: 11.8 bits;  conditional E-value: 9.9e-05
       Ank_3   1 nGetpLhlAarsgnleivkfLlenkgadvn 30 
                 +Get+Lh+A++ g+    + Lle  g +v+
  KHJ35063.1 853 HGETALHIAVKLGRKVATRILLE-TGSNVH 881
                 79*************88999999.788876 PP

>> OrfB_Zn_ribbon  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.2   6.7e-05       0.2      27      60 ..     231     262 ..     226     264 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 6.7e-05
  OrfB_Zn_ribbon  27 TSktCseCgsknkealsgrtfkCpnCgfeadrDv 60 
                     T  +C+ Cg++n++  s+  +   +C f ++rD 
      KHJ35063.1 231 TFYQCPICGQTNSH--SDSYLDQMKCAFIHNRDR 262
                     6679**********..99999999999******6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (937 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      510  (0.0284455); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.72u 0.29s 00:00:01.01 Elapsed: 00:00:00.46
# Mc/sec: 6117.37
//
Query:       KHJ35064.1  [L=197]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (197 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       844  (0.0470746); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1487.15
//
Query:       KHJ35065.1  [L=172]
Description: hypothetical protein EV44_g5483 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (172 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       226  (0.0126053); expected 358.6 (0.02)
Passed bias filter:                      199  (0.0110993); expected 358.6 (0.02)
Passed Vit filter:                         6  (0.000334653); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1264.05
//
Query:       KHJ35066.1  [L=265]
Description: putative duf850 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-50  171.7   2.3    1.4e-50  171.3   2.3    1.1  1  EMC3_TMCO1  Integral membrane protein EMC3/TMCO1-like


Domain annotation for each model (and alignments):
>> EMC3_TMCO1  Integral membrane protein EMC3/TMCO1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.3   2.3     8e-55   1.4e-50       2     169 ..       9     200 ..       8     201 .. 0.97

  Alignments for each domain:
  == domain 1  score: 171.3 bits;  conditional E-value: 8e-55
  EMC3_TMCO1   2 lvldplirdwvllPivivillvgiltgllsellqkllidkkkmekeqkrekelqkrarelqkngdklklkklekrqeelmedqsem............. 87 
                 ++ dp++ +w+l+Pi++v++l+g+l+++++ l  + +  +k +     re++ + r ++l+ ng+ +++ ++++rq++l ++ +++             
  KHJ35066.1   9 IHRDPQLFYWILFPITVVMILTGVLRHYATILTANAP--QK-QGLLSIREQQSLLRGINLRINGNSISKSSFQSRQNYLVGAFKSGsflkdpekkgqga 104
                 5679*******************************97..66.9******************************************************** PP

  EMC3_TMCO1  88 ............mmdqmkpmivtmipqiliffwlnsffsgfvvaklpfpltgrfksllqrgl..esldvrfvssiswYflcsfglsqiirklLgea 169
                             mm +mk++i++++pq+li++w+n ff+gfv+ +lpfplt++fks+lq g+  +  d +++ssiswY lc fgl++ii+ l g++
  KHJ35066.1 105 pnpmtdpaamegMMGMMKGNIAMIVPQTLIMGWINTFFNGFVIIRLPFPLTIKFKSMLQAGVatKEMDPQWMSSISWYVLCIFGLQPIINYLAGID 200
                 ******************************************************************************************998875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1957.20
//
Query:       KHJ35067.1  [L=917]
Description: putative dna cross-link repair protein pso2 snm1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-35  121.5   0.0    4.1e-35  120.3   0.0    1.7  1  DRMBL          DNA repair metallo-beta-lactamase
    2.5e-05   23.9   0.0    4.7e-05   23.0   0.0    1.4  1  Lactamase_B_2  Beta-lactamase superfamily domain


Domain annotation for each model (and alignments):
>> DRMBL  DNA repair metallo-beta-lactamase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.3   0.0   4.5e-39   4.1e-35       2     109 ..     753     880 ..     752     881 .. 0.95

  Alignments for each domain:
  == domain 1  score: 120.3 bits;  conditional E-value: 4.5e-39
       DRMBL   2 elesllttdpseaqihlvslkklekeklekylkalkekfdsvlafrPtGWtkkekkkkdlekikess....................ksrekisiyrvp 80 
                 el s++t+dp+eaqihl  l++++ e+l++yl+++k+ f++v++frP+GWt++++k++ +++    +                    +s+++ s+++vp
  KHJ35067.1 753 ELMSRMTNDPREAQIHLQMLMEIRAETLKEYLNSYKPYFSRVVGFRPSGWTYRPPKSRGTQTATIPQilnspswrssfslsdlvpqrGSTNEASCFGVP 851
                 67799**************************************************9999997666658******************************* PP

       DRMBL  81 YSeHSSfrELkefvkslkpkkiiptVnvg 109
                 YSeHSSfrEL++f+++l+++k+iptVnvg
  KHJ35067.1 852 YSEHSSFRELTMFICALRIEKVIPTVNVG 880
                 ***************************97 PP

>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.0   0.0   5.2e-09   4.7e-05      29     169 ..     492     637 ..     478     659 .. 0.69

  Alignments for each domain:
  == domain 1  score: 23.0 bits;  conditional E-value: 5.2e-09
                    .SEEEEE-SS--HHHHGGGGCCCCC--EEEEEEEEHHHHHHCCTTCGHHHCHTTTTEEEEEE-TTSEEEE.CSTTEEEEEEEE-EE--C..TCCE- CS
  Lactamase_B_2  29 ppidaVllthaHyDHlaglltlrelrpkklplyapkgvlavleanfvylaleeepavnvheldwgesfel.gdggleitatparhksgr..rldrn 121
                    +  +a +l+h H DH+ gl +    +    p+y++k ++  +++++  +a+       v +l+ +++f++ + +++ + ++pa+h  g    l ++
     KHJ35067.1 492 KGCNAYFLSHFHSDHYIGLSSSWC-H---GPIYCSKVTANLVKQQLRVDAR------YVIPLEFDKKFRVpETPNVYVLMIPANHCPGSslFLYEK 577
                    5667889*********99888777.4...38*********99999755444......566**********9667999********99996533333 PP

                    TTTSEEEEEECTTEEEEEESS-S---HHHH...............HHHCT-SEEEEE-S-SST CS
  Lactamase_B_2 122 agdtlGlriegggkrvyyigDtgyipeeig...............erlggadllllditayed 169
                      ++ +    +  +rv+++gD   +p++i                 +++ +d+  ld t++++
     KHJ35067.1 578 VAEAGSS---TRSQRVLHCGDFRACPAHIShpqlmpdvldsvtnkYKHQIIDICYLDTTYLDP 637
                    3333332...23579***********8877554444444444433333335555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (917 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       815  (0.0454571); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.27s 00:00:00.98 Elapsed: 00:00:00.44
# Mc/sec: 6285.24
//
Query:       KHJ35068.1  [L=271]
Description: putative signal peptidase complex subunit spc2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-53  180.8   0.3    2.4e-53  180.3   0.3    1.3  1  SPC25     Microsomal signal peptidase 25 kDa subunit (SPC25)


Domain annotation for each model (and alignments):
>> SPC25  Microsomal signal peptidase 25 kDa subunit (SPC25)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.3   0.3   1.3e-57   2.4e-53       1     160 [.      48     202 ..      48     204 .. 0.97

  Alignments for each domain:
  == domain 1  score: 180.3 bits;  conditional E-value: 1.3e-57
       SPC25   1 elKntlDdalkeyltdlgfkeshtltdvrLalGylavaiaavaflydykveFeeskpvlaiavvlYfilsgiltlystfvekntifvgkrktgskriek 99 
                 +lKn  Ddal+ yl++ +f++sh+l+d+rLa+Gy+a++i+av+f++dyk++Fe++k ++aiav++Y+i++gilt+++ fvek++i+vg++++g     k
  KHJ35068.1  48 DLKNSSDDALPVYLNSIKFRQSHRLSDIRLAIGYIAILISAVTFFWDYKFGFESTKVYTAIAVLIYTIFNGILTYWMSFVEKDIIYVGTNSQGD----K 142
                 79*************99**************************************************************************996....8 PP

       SPC25 100 itissslkklsptytltvsykdksnkgkslkakeleksvgewFdedGylveeefeqwlakl 160
                 i+iss++ k+ p y+ltv+   ks++++ +++  l+k+++ewF++ Gy+v  +f+q+la+ 
  KHJ35068.1 143 IQISSKIDKHVPVYNLTVTTYLKSQPKRPNNQI-LKKPFNEWFNKAGYFVPLPFQQMLASN 202
                 ********************9999997777777.************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (271 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       675  (0.0376485); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 2065.03
//
Query:       KHJ35069.1  [L=378]
Description: hypothetical protein EV44_g5637 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.026   14.6   4.8        1.8    8.7   0.5    2.3  2  ARL2_Bind_BART  The ARF-like 2 binding protein BART
        0.2   11.5   2.0       0.38   10.6   1.5    1.8  1  GP41            Retroviral envelope protein
        1.4    8.6  24.2         10    5.8  23.3    2.2  1  SHE3            SWI5-dependent HO expression protein 3


Domain annotation for each model (and alignments):
>> ARL2_Bind_BART  The ARF-like 2 binding protein BART
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   0.5    0.0003       1.8      51     112 ..     199     260 ..     176     263 .. 0.85
   2 ?    7.6   0.3   0.00065       3.9      20      72 ..     299     351 ..     281     368 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0003
                     HHHHHHHHHHHHTT-SSS--THHHHH....SS-GGSSHHHHHHHHGGG-HHHHHHHHHHHHH CS
  ARL2_Bind_BART  51 kklveklleslleeigismeeflealekslsekkevakkvfeqllaadDFeaFkkmMvkrnk 112
                      k  e++l +l ++i+i++++ + a+e++ + k+e++k   +    ++D +++ +mM +rn+
      KHJ35069.1 199 LKRKERQLADLRQQIEIEKNKAIAAVESERKWKEEIEKVESKAKRDIEDALNYAAMMEARNN 260
                     56679*********************888888889888888999999999999999999997 PP

  == domain 2  score: 7.6 bits;  conditional E-value: 0.00065
                     HHHHHHHHHHHHTT--SS-SSTTHHHHHHHHHHHHHHHHHHHHTT-SSS--TH CS
  ARL2_Bind_BART  20 spvqeFidencivFddeeenkleytdihkeYkklveklleslleeigismeef 72 
                     +++q  +d++++ F +   ++ e  ++++eYk++ e+ l+++      + ee 
      KHJ35069.1 299 NTLQGLCDQQATQFSEIVRERDEISKVYEEYKSTQEEALRDIKRLSRKQREES 351
                     677888999*******999999***************9998665545444444 PP

>> GP41  Retroviral envelope protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.5   6.3e-05      0.38      86     140 ..     255     311 ..     196     317 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 6.3e-05
                 H..HHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHH CS
        GP41  86 WdkvkksLegiWnnt..evsydlaelhnliediqnqqektldeldkldklaqslanw 140
                  +  ++ +++ W+++  ev+  +a+l+++iedi  ++++  + l++l++l ++ a +
  KHJ35069.1 255 MEARNNTMTNHWKDQglEVNRAVAKLSKEIEDIVLERKQDDERLNTLQGLCDQQATQ 311
                 566789999*****999*****************99999999999999887655555 PP

>> SHE3  SWI5-dependent HO expression protein 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8  23.3    0.0017        10       1     220 [.     139     355 ..     139     362 .. 0.70

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0017
                 XXHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
        SHE3   1 StkVIesLHeqiDaLtktnlqLtqqsqeLleklelaqkkeskflenlaslkhENdnLsslLkRKerrlkdlekelselkesveelklekkqlkkrlens 99 
                 S++VIe L    D+L +++   +   +e  +  +la+ + + +  +     h+    ++lLkRKer+l dl ++++  k++   + +++ + k+++e+ 
  KHJ35069.1 139 SGRVIERLMGDNDMLKRDLKIERLRAEEHKQAVKLAEGRMEALSAEYEGKLHDAAINKTLLKRKERQLADLRQQIEIEKNKAIAAVESERKWKEEIEKV 237
                 67888888888888877655545555555555566666666666666666688888899*************************************999 PP

                 CCHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHHSSSXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX..XXXXXX CS
        SHE3 100 saseteleeelerlkvqYdalvdsqk.eYkehYqqeieeLkesleklklenekqleelqerissndkdidtkldsynnkkknlesieeekn..kkllkk 195
                 +++ ++ +e+      +Y a++++++    +h++++  e ++++ kl +e e  + e +++    d+ ++t+    +++  ++ +i +e++  +k+ ++
  KHJ35069.1 238 ESKAKRDIED----ALNYAAMMEARNnTMTNHWKDQGLEVNRAVAKLSKEIEDIVLERKQD----DERLNTLQGLCDQQATQFSEIVRERDeiSKVYEE 328
                 8877776666....478*****997626799****99999999999999999665555443....4444444444444455555554443311566666 PP

                 XXXXXXXX..XXXXXXXXXXXXXXXXX CS
        SHE3 196 leslasel..dleswlelykelkelil 220
                 ++s ++e   d++ + ++ +e  e ++
  KHJ35069.1 329 YKSTQEEAlrDIKRLSRKQREESERVI 355
                 666655433368888888777666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2144  (0.119583); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 2573.90
//
Query:       KHJ35070.1  [L=326]
Description: putative brix domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-41  142.4   0.1    2.8e-41  141.8   0.1    1.3  1  Brix      Brix domain
  ------ inclusion threshold ------
       0.13   12.9   0.7        2.3    8.9   0.1    2.5  2  NUP50     NUP50 (Nucleoporin 50 kDa)


Domain annotation for each model (and alignments):
>> Brix  Brix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.8   0.1   3.1e-45   2.8e-41       1     192 [.      39     239 ..      39     240 .. 0.95

  Alignments for each domain:
  == domain 1  score: 141.8 bits;  conditional E-value: 3.1e-45
                 BTT--HHHHHHHHHHHHHCTTSEEEEEEECT.-TTTHHHHHHH-HHHHHHHHHCTCSEEEEEE..S.STTE............EEEEEEEE..CECTGG CS
        Brix   1 grktssrlrqllkdlrslmkphtasflkrns.nklkdlvelagvthlellsekndcslfvfelskk.rPng............ptlefkve..nyslmk 83 
                 g+k+s+ ++++l+dl++l+ p +++f+k+n+ ++++d       +++e++seknd+ +++f++s+k rP+             ++le+ ++  ++    
  KHJ35070.1  39 GTKCSQVVQDALTDLYQLKVPLAKKFTKKNDiHPFDD------PSSIEFFSEKNDAPIVIFGSSSKkRPHTitmvrlfgfkilDMLEMYLDpeSFRNLA 131
                 689*************************9999*****......***************************999*****************999****** PP

                 GSTTTSTS-TT---EEEEES........HHHHHHHHHHHHHH.....SEEEG..-B-GG-SEEEEEEES.....CCTTTECEEEEEEEEEEE..STTTT CS
        Brix  84 dlkkakktefgsrPllvfng.......kenfkllksllqdlFr...vpkislkspklsglrrvvlftaae....nqetdktisfRhYaiklkksgkklp 168
                 ++k++ k+ +g +P+l+f+g        ++f+llk+l+ d+F+    +ki++     +gl+++v+++a +    +++t + +++R Y i++k+sg+k p
  KHJ35070.1 132 EFKNK-KCAVGLKPMLLFAGtafenpvANEFSLLKNLFIDFFKgelADKIDV-----EGLQYLVSISAIDvvdgKEST-PIVHLRAYCIRTKRSGQKFP 223
                 **999.****************99999999*************999999999.....9*********98777754444.59****************** PP

                 ECT..T..EEEEEEESEEEEEEEE CS
        Brix 169 nlekekkerveLeEiGPrfdLklr 192
                         rve+eE+GPr+d+++ 
  KHJ35070.1 224 --------RVEVEEMGPRMDFRIG 239
                 ........*************986 PP

>> NUP50  NUP50 (Nucleoporin 50 kDa)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.054   4.8e+02      26      38 ..     239     251 ..     235     270 .. 0.80
   2 ?    8.9   0.1   0.00026       2.3      34      49 ..     287     306 ..     285     321 .. 0.73

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.054
                 XXXXXXXSHHHHC CS
       NUP50  26 gtfkkAseevLak 38 
                 g f++A+e+vL+ 
  KHJ35070.1 239 GRFQQANESVLKE 251
                 789********96 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00026
                 HHHHCS-S-S---TT....T CS
       NUP50  34 evLakRkIkkakrrv....s 49 
                 +vL++Rk+k++kr +    +
  KHJ35070.1 287 KVLQTRKMKGLKRTRdiniD 306
                 69***********9966552 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (326 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.45u 0.27s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 2276.14
//
Query:       KHJ35071.1  [L=878]
Description: hypothetical protein EV44_g3311 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.084   12.8   0.1       0.31   11.0   0.1    1.9  2  DENN      DENN (AEX-3) domain


Domain annotation for each model (and alignments):
>> DENN  DENN (AEX-3) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   1.7e-05      0.31      26      88 ..     532     589 ..     515     602 .. 0.80
   2 ?   -2.6   0.0      0.25   4.6e+03      14      81 ..     665     732 ..     658     738 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 1.7e-05
        DENN  26 ekrlkssskeaplesfianlllevplPapgktlklvslaveekillqrpedselPledvdlke 88 
                 +++++    ++ + +fi +l +++p P+++k ++     +++++l+ + ed+++P++ + +++
  KHJ35071.1 532 ANKIQA---SNLIDDFIPELSCNIPKPKKEKMISE--IKNRDTLLIDFEEDTSIPTSTYTFSQ 589
                 333333...569*******8888777777777777..88*****************9998875 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.25
        DENN  14 ffelfkkiLkalekrlkssskeaplesfianlllevplPapgktlklvslaveekillqrpedselPl 81 
                 f + f++++k +   + +   ea++ + +++ + ++ + ++g+  k++ +  + +il +++++s  P 
  KHJ35071.1 665 FKSNFRSLMKNIRAFRGELVVEAHFGRTMTHGIKDIYISKKGEYEKTYDEETTRRILNESKSNSLTPG 732
                 33444555555555444444588899999999999999999999999777777777766666666675 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (878 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 5842.32
//
Query:       KHJ35072.1  [L=545]
Description: hypothetical protein EV44_g3802 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.7e-24   85.8   0.0    4.1e-24   85.2   0.0    1.3  1  DDE_1        DDE superfamily endonuclease
    1.1e-06   28.3   0.2    2.9e-06   26.9   0.2    1.7  1  HTH_psq      helix-turn-helix, Psq domain
    1.1e-05   25.2   0.0    0.00015   21.6   0.0    2.2  2  DDE_3        DDE superfamily endonuclease
    3.5e-05   23.7   0.1    9.7e-05   22.3   0.0    1.8  2  HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain
     0.0036   16.9   1.8       0.01   15.4   0.1    2.5  2  CENP-B_N     CENP-B N-terminal DNA-binding domain
  ------ inclusion threshold ------
      0.085   12.7   0.2       0.27   11.1   0.2    1.8  1  HTH_23       Homeodomain-like domain
       0.15   12.2   0.1       0.15   12.2   0.1    2.0  2  HTH_28       Helix-turn-helix domain


Domain annotation for each model (and alignments):
>> DDE_1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.2   0.0   1.6e-27   4.1e-24       3     175 .]     196     364 ..     194     364 .. 0.91

  Alignments for each domain:
  == domain 1  score: 85.2 bits;  conditional E-value: 1.6e-27
       DDE_1   3 rltvllcanaagsekLkplvigkaksprafkngektkkkldveyksnrkawltssifeeWLkvfdkrle..aekrkilLlldssrshetvel.leselq 98 
                 ++ +++ ++  ++   +  ++ k++++ ++++ +  + + d+ +k ++++ ++++++ eWLk+fdk ++   ++ + +L+ld+++sh+ + +   ++ +
  KHJ35072.1 196 EWATAIVCVNGEGASTPQFLVVKGTYHLSSWY-TESELPDDWVIKTTSNGLTDNETGLEWLKHFDKHTVarTKGLYRMLVLDGHESHRLAAFqDYCKNH 293
                 566666667777788999**************.9999999***************************99888899*************9999799**** PP

       DDE_1  99 niklvflPassasllqPldqgvvselKarYrrqllqalleeqnrlskeqkkltlldalkfikkAwn.avsketiksaf 175
                 ni ++++Pa s++l qPld+g++s lK+ Y r++   + +  n++ k       +++l    +A+   +++++ik++f
  KHJ35072.1 294 NIITLCFPAYSSHLTQPLDVGCFSVLKRLYSREIDVFIKAHINHITK-------VEFLIAFHAAYLaTITEKNIKAGF 364
                 *********************************99999999999988.......888888889998899999999988 PP

>> HTH_psq  helix-turn-helix, Psq domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.9   0.2   1.1e-09   2.9e-06       5      41 ..      10      47 ..       8      50 .. 0.90

  Alignments for each domain:
  == domain 1  score: 26.9 bits;  conditional E-value: 1.1e-09
     HTH_psq  5 laaAleavvnGk.mSirkAArkYgiPrsTLwrrkrgky 41
                + +A+ea+++ k mS r  Ar+Y+iP sTL++r++g++
  KHJ35072.1 10 IILAIEAIRTYKnMSRRATARLYNIPESTLRSRINGNI 47
                789******7666*********************9986 PP

>> DDE_3  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0      0.13   3.3e+02       2      49 ..     159     209 ..     158     223 .. 0.70
   2 !   21.6   0.0   5.8e-08   0.00015      64     121 ..     251     309 ..     232     328 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.13
       DDE_3   2 vvfiDEsgfqlgt.vrrrawakkGkrer..leeygrrgrvnligaldekgg 49 
                 ++ +DE+gf  g+ +   a  + +++ r    + g+ +  ++i+ ++ +g 
  KHJ35072.1 159 LYNFDETGFMMGViCPSMAVTRADRDSRgkTIQPGNQEWATAIVCVNGEGA 209
                 6779*********99999999999998833444445555555555555444 PP

  == domain 2  score: 21.6 bits;  conditional E-value: 5.8e-08
       DDE_3  64 faeflerlletalqak...kivlilDnasiHkseslrelveeeadrlellylPpySPelNp 121
                   e+l++  ++          +l+lD++  H+ ++++++ ++  +++ +l +P+yS++l +
  KHJ35072.1 251 GLEWLKHFDKHTVARTkglYRMLVLDGHESHRLAAFQDYCKN--HNIITLCFPAYSSHLTQ 309
                 455666666666655556689*********************..**************965 PP

>> HTH_Tnp_Tc5  Tc5 transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   3.8e-08   9.7e-05       2      64 ..      61     119 ..      60     121 .. 0.90
   2 ?   -3.2   0.0       3.4   8.7e+03      48      56 ..     250     258 ..     239     260 .. 0.68

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 3.8e-08
                  HHHHHHHHHHHHHHC-CT---SCHHHHHHHHHHHHHSSSCT-TT-S--CHHHHHHHHHT.S--X CS
  HTH_Tnp_Tc5   2 pelEkaLleWirqlrergipitgelirekAqelaslaadlgepdfkaSkgWldrFkkRh.glkr 64 
                  + +Ek+L+++i ++++rg+ ++ + + ++A+ ++     ++ +  +++k W +rF +R  +lk+
   KHJ35072.1  61 EIEEKVLIRYILDMDARGFAPRLAGVEDMANYIL-----ESRGARRVGKLWAQRFVQRRpELKM 119
                  568*****************************95.....6679***************866665 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 3.4
                  --CHHHHHH CS
  HTH_Tnp_Tc5  48 aSkgWldrF 56 
                   + +Wl++F
   KHJ35072.1 250 TGLEWLKHF 258
                  455799999 PP

>> CENP-B_N  CENP-B N-terminal DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.1     4e-06      0.01      13      41 ..      14      41 ..      14      45 .. 0.86
   2 ?   -0.7   0.2      0.43   1.1e+03      25      25 ..     506     506 ..     484     531 .. 0.52

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 4e-06
                HHHHHHHHCTT-HHHHHHHHT--CCHHHH CS
    CENP-B_N 13 ievIqrleegeSkaelarrfnvpestlsd 41
                ie+I+ +  ++S+++ ar +n+pestl+ 
  KHJ35072.1 14 IEAIRTY-KNMSRRATARLYNIPESTLRS 41
                5677766.69*****************85 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.43
                 H CS
    CENP-B_N  25 k 25 
                 +
  KHJ35072.1 506 R 506
                 2 PP

>> HTH_23  Homeodomain-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.2   0.00011      0.27       8      35 ..      14      40 ..       8      45 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00011
      HTH_23  8 lrillllaeGlsvreIAreLgvsrrTvy 35
                +++++ ++  +s+r+ Ar+++++++T++
  KHJ35072.1 14 IEAIRTYK-NMSRRATARLYNIPESTLR 40
                34444455.8****************98 PP

>> HTH_28  Helix-turn-helix domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   5.7e-05      0.15       4      34 ..      15      44 ..       8      49 .. 0.78
   2 ?   -2.8   0.3       2.8   7.1e+03      42      52 .]     467     477 ..     458     477 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.7e-05
      HTH_28  4 eiikllaaGhsvreaArelgisrrtvyrWik 34
                e+i+ + + +s+r++Ar+++i ++t+++ i+
  KHJ35072.1 15 EAIRTY-KNMSRRATARLYNIPESTLRSRIN 44
                333334.358*****************9986 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.8
      HTH_28  42 agLvprrrrpr 52 
                 ++L +rrr+++
  KHJ35072.1 467 EALSKRRRAKK 477
                 78999999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (545 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       501  (0.0279436); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.44
# Mc/sec: 3739.34
//
Query:       KHJ35073.1  [L=205]
Description: putative rna recognition domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-07   29.9   0.0      5e-07   29.4   0.0    1.2  1  RRM_5     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
      1e-06   28.5   0.0    2.2e-06   27.4   0.0    1.6  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
  ------ inclusion threshold ------
      0.093   13.1   0.0      0.093   13.1   0.0    2.4  2  DUF1180   Protein of unknown function (DUF1180)


Domain annotation for each model (and alignments):
>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.4   0.0   8.3e-11     5e-07      14     106 ..      13     113 ..       3     125 .. 0.82

  Alignments for each domain:
  == domain 1  score: 29.4 bits;  conditional E-value: 8.3e-11
       RRM_5  14 atgspgaagvaegsVllVyglepdkvnld....klFnlfclYgnvervkflktkk..etalvqmgdasaveravqHLnnaklfgk..rlevalSKqqav 104
                 +tg + ++ +a +  l V+++  +k+  +    +l++lf+ Yg v  v  l+t k  ++a +   d + +  a+  L++ +lfgk  r++ a SK + +
  KHJ35073.1  13 NTGGSKTSNYAPNQTLYVTNIPSSKIQKEdlrrSLYILFSTYGTVLDVVALRTMKmrGQAHIVYRDIQTATIAMRELQGFELFGKemRIQYARSKSDMI 111
                 45556777888999999999999999875233368**************9999754499**************************77777888999988 PP

       RRM_5 105 se 106
                 ++
  KHJ35073.1 112 AK 113
                 76 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.4   0.0   3.7e-10   2.2e-06       1      70 []      28     100 ..      28     100 .. 0.83

  Alignments for each domain:
  == domain 1  score: 27.4 bits;  conditional E-value: 3.7e-10
                 EEEESE.TTTSSHHHHHH....HHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE CS
       RRM_1   1 lfVgnL.ppdvteeeLke....lFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrelk 70 
                 l+V+n+ ++ + +e+L++    lFs +G + ++   r  t k +g a + + +   A+ A+++l+g +l g+e++
  KHJ35073.1  28 LYVTNIpSSKIQKEDLRRslyiLFSTYGTVLDVVALR--TMKMRGQAHIVYRDIQTATIAMRELQGFELFGKEMR 100
                 78899944557777776655559*******6666666..9*******************************9975 PP

>> DUF1180  Protein of unknown function (DUF1180)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   1.6e-05     0.093      79     127 ..      23      71 ..       2      93 .. 0.72
   2 ?   -3.1   6.3       1.5   8.8e+03      32      61 ..     144     172 ..     120     205 .] 0.52

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 1.6e-05
     DUF1180  79 aggslavvpelssntdkpmtlqrallvlvvvsaavivylvvRtvrlrrr 127
                 a  +   v++++s++ + + l+r l++l    ++v+ +  +Rt+++r +
  KHJ35073.1  23 APNQTLYVTNIPSSKIQKEDLRRSLYILFSTYGTVLDVVALRTMKMRGQ 71 
                 233334567899999999999*************************643 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 1.5
     DUF1180  32 speaepPlppgataaespgkataieaksaq 61 
                    + pP ppg+ a  s +k+   eaks++
  KHJ35073.1 144 VAASLPPKPPGTLAVISSNKSLG-EAKSPT 172
                 44455888885544444333333.222221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (205 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       522  (0.0291148); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1539.64
//
Query:       KHJ35074.1  [L=689]
Description: putative glycosyl hydrolase family 47 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   8.3e-169  562.3   0.0   9.7e-169  562.1   0.0    1.0  1  Glyco_hydro_47  Glycosyl hydrolase family 47


Domain annotation for each model (and alignments):
>> Glyco_hydro_47  Glycosyl hydrolase family 47
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  562.1   0.0  5.4e-173  9.7e-169       1     458 []     143     637 ..     143     637 .. 0.96

  Alignments for each domain:
  == domain 1  score: 562.1 bits;  conditional E-value: 5.4e-173
                     HHHHHHHHHHHHCTTSSEEETTTTEEE-SS..SS-CCHHHHHHHHHHCCHHHHHHHHHHHHHHC----S.SS.EEEHHHHHHHHHHHHHHHHHHH CS
  Glyco_hydro_47   1 afkhswegYkkyAwghDelrPlskkgrdtf.gglgatlvDsLdtllimglkeefeeaveavekkidfdtsdskevsvFEttIRyLGGLlsaydls 94 
                     af  sw++Y ++Awg+De++P+skkgr+++ +glg+++vD+Ldt+++m+l++++++a+e++++++++d+ ++ +v++FEttIR+LGGLlsa++ls
      KHJ35074.1 143 AFVLSWDAYDRHAWGYDEFHPVSKKGRQMTpNGLGWIIVDALDTMILMNLTSQLTHAREWLKTSLNYDQ-NQ-DVNTFETTIRMLGGLLSAHYLS 235
                     5888****************************************************************4.55.89******************** PP

                     ................S-HHHHHHHHHHHHHHHHGGGSSTTS---SEEETTT--EE-.STCGCEEEHHHHCSSHHHHHHHHHHHT-CHHHHHHHC CS
  Glyco_hydro_47  95 ...............ekkedvllekAveladrLlpAFdtpsglpvarvnlkkrkaskkerassesvlAelgslslEftrLsqlTgdkkYedlaer 174
                                    + +ed++lekA++ladr+++AFd+psg+p+a+vnlk++k+  ++++ ++s++Ae+++l+lEf++L++lTg++ Y+++ae+
      KHJ35074.1 236 nkfpdmapitdddegNAGEDLYLEKAKDLADRIIGAFDSPSGIPFASVNLKTSKGLPSHEDGGASSTAEAATLQLEFKYLAKLTGEAFYWQAAEK 330
                     **************999****************************************************************************** PP

                     CHHHHHCHCC.HHHTTB-BSEEETTT--EESTEE-SSTTTHHHHHHHHHHHHHCTS--HHHHHHHHHHHHHHHHH.TEEE-TTT..--EEE-EEC CS
  Glyco_hydro_47 175 vtkaleelqektklpglvpikidastgkfvaekislgargDSyYEYllKqylllggeeeqyrkmyeealdaikkhllfrpskkkeddllfvgevt 269
                     v+k+++++     ++glvpi+i+a+ g+f++e+i+lg+rgDSyYEYl+Kqyl++++ee++y++m++eal++++kh l+++sk++   ++++ge++
      KHJ35074.1 331 VIKVIDDN---IAQDGLVPIYISADIGHFRGENIRLGSRGDSYYEYLIKQYLQTSKEEPIYNEMWNEALQGVRKH-LITYSKPS--RFTILGERP 419
                     *******3...4589************************************************************.77779999..89******* PP

                     TTCTS.EE-EEEGGGGHHHHHHHHHHHTT.-H.............HHHHHHHHHHHHHHHHHHHTSTTS---SEEEE-SS............... CS
  Glyco_hydro_47 270 steegklspeidhLscFlgGllalgakll.ek.............eedlelAkkltegcvkayeatktglmPEifevkpces............. 337
                     ++ +g+l+p+idhL+cF++G++al+ + + ++             eed++lA++l  +c+ +y+ ++tgl+PEi++++ ++              
      KHJ35074.1 420 NGLNGNLHPKIDHLVCFMPGTIALAVTGGiSEseakklsswnsqkEEDMRLAQELIFTCWGMYKVMATGLAPEIVHFNIENPplplsaphnppse 514
                     999**********************99887669*********************************************98889*******99998 PP

                     ......S-ECTSSSSEEE-.GGG--B----HHHHHHHHHHHHH--THHHHHHHHHHHHHHHHCEETT...EE--ECETTSSS-EE-S-B-HHHHH CS
  Glyco_hydro_47 338 ...aeecewneekkdealkriedrkyllRPEaiESlfylYritgdekyrevgwemfealekatktes...gysaledVtkeepekeDemeSFwla 426
                        +++ ew++   d+ +k  +dr++l+RPE++ESlfyl+ritgd kyre+gwemf++++ +t+++    g+++l+d ++ +p ++D+meSFwla
      KHJ35074.1 515 linSKDAEWKK---DFVVK-SNDRHNLQRPETVESLFYLWRITGDLKYREWGWEMFNSFMAHTAINGgldGFTSLSDADVIPPITRDNMESFWLA 605
                     76655555554...78888.9********************************************87778************************* PP

                     THHHHHHHHC-S-TTT-TTTEEE-TTS-EEE- CS
  Glyco_hydro_47 427 EtlKYlYLlFsdedvlsldeyVfnTeAHplkr 458
                     EtlKY+YLlFs++d+l+ld++VfnTeAHp++r
      KHJ35074.1 606 ETLKYFYLLFSPNDLLPLDQVVFNTEAHPFPR 637
                     ******************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (689 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.46
# Mc/sec: 4468.92
//
Query:       KHJ35075.1  [L=363]
Description: putative actin related protein 2 3 complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-12   47.4   8.1     0.0015   19.3   0.0    6.7  7  WD40         WD domain, G-beta repeat
    4.9e-07   30.0   0.1       0.17   12.2   0.0    5.2  6  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
  ------ inclusion threshold ------
      0.043   13.8   0.1       0.31   11.0   0.1    2.5  2  PD40         WD40-like Beta Propeller Repeat
      0.055   13.4   0.1       0.16   11.8   0.0    1.9  2  eIF2A        Eukaryotic translation initiation factor eIF2A
        0.1   11.6   0.0         12    4.8   0.0    3.2  4  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p
       0.12   10.3   0.0        2.6    5.9   0.0    2.3  3  IKI3         IKI3 family


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0      0.49   1.5e+03      10      29 ..       8      30 ..       3      37 .. 0.71
   2 !   19.3   0.0   5.1e-07    0.0015       6      37 ..      49      81 ..      44      82 .. 0.90
   3 ?    1.3   0.0      0.24   7.2e+02      14      29 ..     102     117 ..      95     121 .. 0.88
   4 !   12.6   0.0   6.6e-05       0.2      12      37 ..     142     171 ..     135     172 .. 0.80
   5 ?    4.0   0.2     0.035   1.1e+02      12      34 ..     207     229 ..     196     231 .. 0.80
   6 ?   -0.2   0.0      0.71   2.1e+03      16      32 ..     257     272 ..     238     274 .. 0.75
   7 !    6.3   0.1    0.0066        20       9      37 ..     328     361 ..     322     362 .. 0.66

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.49
                S.SS..EEEEEEETTSSEEEEEE CS
        WD40 10 H.ss..vtslafspdgawlasGs 29
                H ++  +++  fs d++ la + 
  KHJ35075.1  8 HlFHqlISDHTFSADKQTLAVAR 30
                34446799999*****9998654 PP

  == domain 2  score: 19.3 bits;  conditional E-value: 5.1e-07
                EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37
                +l+GH + vtsl+  p++  ++++s D++  +W
  KHJ35075.1 49 ELKGHdKIVTSLDIAPSSGRIVTCSQDRNALVW 81
                689**6669************************ PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.24
                 EEEEEETTSSEEEEEE CS
        WD40  14 tslafspdgawlasGs 29 
                 ts+++sp+ + +a Gs
  KHJ35075.1 102 TSVRWSPSETKFAVGS 117
                 8999******999887 PP

  == domain 4  score: 12.6 bits;  conditional E-value: 6.6e-05
                 S....EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40  12 s....vtslafspdgawlasGsdDgtvriW 37 
                 +    +t +a++p++ +la Gs D   r++
  KHJ35075.1 142 PirstITTVAWHPNSVLLAIGSTDAYARVF 171
                 344459***************999888876 PP

  == domain 5  score: 4.0 bits;  conditional E-value: 0.035
                 SEEEEEEETTSSEEE.EEETTSEE CS
        WD40  12 svtslafspdgawla.sGsdDgtv 34 
                 +v++ +fsp+g+ la +++ D ++
  KHJ35075.1 207 WVHATSFSPSGNALAfAAH-DSSI 229
                 389999*******987888.9987 PP

  == domain 6  score: -0.2 bits;  conditional E-value: 0.71
                 EEEETTSSEEEEEETTS CS
        WD40  16 lafspdgawlasGsdDg 32 
                 l ++ ++ ++a+G  D+
  KHJ35075.1 257 LIWNGENELIAAGY-DC 272
                 44999999999888.86 PP

  == domain 7  score: 6.3 bits;  conditional E-value: 0.0066
                 SS.SSEEEEE..EETTSSE..EEEEETTSEEEEE CS
        WD40   9 GH.ssvtsla..fspdgaw..lasGsdDgtvriW 37 
                  H + +t ++   s+ g+   +++++ Dg v iW
  KHJ35075.1 328 VHqNTITTIRiyESSGGKVkkFSTSGVDGRVVIW 361
                 676778888664333333355677888******* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.37   1.1e+03      47      65 ..      20      37 ..      11      80 .. 0.56
   2 ?    1.7   0.0      0.11   3.3e+02      40      65 ..     100     125 ..      95     136 .. 0.81
   3 !   12.2   0.0   5.6e-05      0.17       2      67 ..     105     173 ..     104     181 .. 0.78
   4 !    7.5   0.0    0.0017       5.2      19      64 ..     186     231 ..     180     238 .. 0.88
   5 ?   -0.1   0.0      0.39   1.2e+03      43      60 ..     256     273 ..     246     298 .. 0.79
   6 ?    0.9   0.0      0.19   5.7e+02      48      76 ..     320     350 ..     312     362 .. 0.76

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.37
  ANAPC4_WD40 47 kpdgklLavaysdgevrll 65
                 + d + Lava + ++v+l+
   KHJ35075.1 20 SADKQTLAVARE-NRVELY 37
                 445555555433.334333 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.11
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrll 65 
                    +s++W+p+++ +av+     + ++
   KHJ35075.1 100 AATSVRWSPSETKFAVGSGARVIAVC 125
                  6789************9887766666 PP

  == domain 3  score: 12.2 bits;  conditional E-value: 5.6e-05
  ANAPC4_WD40   2 swcptmDLiAlatedgellvfRlngqrvwtl...eedkedsevrsLaWkpdgklLavaysdgevrllda 67 
                  +w+p+   +A+++    ++v+ ++ ++ w +    ++   s+++ +aW+p+  lLa++  d   r++++
   KHJ35075.1 105 RWSPSETKFAVGSGARVIAVCYFEEENDWWVskhIKKPIRSTITTVAWHPNSVLLAIGSTDAYARVFSS 173
                  5777777777777778888888777776766444445557899******************99999876 PP

  == domain 4  score: 7.5 bits;  conditional E-value: 0.0017
  ANAPC4_WD40  19 llvfRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrl 64 
                  ++  Rl ++ v +   +++++ v++ +++p+g+ La+a +d+++ +
   KHJ35075.1 186 VWGERLPFNTVCGEYLNNSSGWVHATSFSPSGNALAFAAHDSSITV 231
                  6667888889998888999999*******************99986 PP

  == domain 5  score: -0.1 bits;  conditional E-value: 0.39
  ANAPC4_WD40  43 sLaWkpdgklLavaysdg 60 
                  +L W+ +++l+a +y+  
   KHJ35075.1 256 ALIWNGENELIAAGYDCE 273
                  678888888888888655 PP

  == domain 6  score: 0.9 bits;  conditional E-value: 0.19
  ANAPC4_WD40  48 pdgklLavaysdg..evrlldaesgkvvhsl 76 
                  +d+++L  +++++  ++r+++++ gkv + +
   KHJ35075.1 320 KDDTILTTVHQNTitTIRIYESSGGKVKKFS 350
                  5788899999987668999999999876544 PP

>> PD40  WD40-like Beta Propeller Repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       2.4   7.2e+03      14      24 ..      17      27 ..      15      31 .. 0.73
   2 ?   11.0   0.1    0.0001      0.31       4      26 ..     201     223 ..     201     224 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.4
                EEE-TTSSEEE CS
        PD40 14 PsfSPDGkrla 24
                 +fS D ++la
  KHJ35075.1 17 HTFSADKQTLA 27
                58999977776 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.0001
                 --SSSS.EEEEEE-TTSSEEEEE CS
        PD40   4 ltntpgnegaPsfSPDGkrlaFs 26 
                 l n++g+ +a sfSP G+ laF+
  KHJ35075.1 201 LNNSSGWVHATSFSPSGNALAFA 223
                 579*******************7 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   5.5e-05      0.16      52     118 ..      91     162 ..      71     168 .. 0.84
   2 ?   -3.7   0.0         3     9e+03     168     184 ..     331     347 ..     319     351 .. 0.57

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 5.5e-05
                 EECCEESSS.EEEEEE-TTSS-EEEEESSSSCEEEEEECS.....CEEEEEEEEES--EEEE-TTSSEEEEE CS
       eIF2A  52 evvelkkegpihdvaWspkskefaviyGkmpakvslfdlk.....vkviskleeqkrNtiffspkgklvlla 118
                   v l+ +  +  v Wsp++++fav  G     v  f+ +      k i+k  ++   t+ ++p+  l++++
  KHJ35075.1  91 TLVLLRINRAATSVRWSPSETKFAVGSGARVIAVCYFEEEndwwvSKHIKKPIRSTITTVAWHPNSVLLAIG 162
                 4555555666899************************99767776777888888899999****99999887 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 3
                 SSS-EEEEEETTTEEEE CS
       eIF2A 168 rvdngfkiwsysGklvy 184
                  + ++++i++ sG  v+
  KHJ35075.1 331 NTITTIRIYESSGGKVK 347
                 34456666666666554 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0     0.068     2e+02     187     207 ..      11      31 ..       2      40 .. 0.83
   2 ?    1.1   0.0      0.05   1.5e+02     187     220 ..     144     177 ..     120     183 .. 0.84
   3 ?    4.8   0.0    0.0039        12     189     212 ..     207     230 ..     197     242 .. 0.82
   4 ?   -3.7   0.0       1.4   4.3e+03     166     199 ..     309     343 ..     299     361 .. 0.51

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.068
    Ge1_WD40 187 hsliveaafspdGtalatase 207
                 h li++ +fs+d  +la+a e
  KHJ35075.1  11 HQLISDHTFSADKQTLAVARE 31 
                 5679999**********9965 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.05
    Ge1_WD40 187 hsliveaafspdGtalatasedGevkffqvyled 220
                  s+i++ a+ p+   la+ s+d + + f  +++ 
  KHJ35075.1 144 RSTITTVAWHPNSVLLAIGSTDAYARVFSSFIKA 177
                 57999**********************9988765 PP

  == domain 3  score: 4.8 bits;  conditional E-value: 0.0039
    Ge1_WD40 189 liveaafspdGtalatasedGevk 212
                  +  ++fsp G ala a++d  + 
  KHJ35075.1 207 WVHATSFSPSGNALAFAAHDSSIT 230
                 577889**************9875 PP

  == domain 4  score: -3.7 bits;  conditional E-value: 1.4
    Ge1_WD40 166 kygsgelsveeieegllkieehslive.aafspdG 199
                  +++++l+ +++++++l   ++ +i++  ++ + G
  KHJ35075.1 309 MFRKMDLKGKAKDDTILTTVHQNTITTiRIYESSG 343
                 56666666666666665544444443313333333 PP

>> IKI3  IKI3 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.9   0.0   0.00088       2.6     311     354 ..      18      60 ..       7      82 .. 0.77
   2 ?    1.4   0.1      0.02        59     306     371 ..     100     165 ..      89     183 .. 0.69
   3 ?   -3.7   0.0      0.69     2e+03     256     277 ..     206     227 ..     200     233 .. 0.71

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.00088
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXX CS
        IKI3 311 aWsadSevLavrledrvqlwtisNyhWYLKqelrysasegveev 354
                 + sad + Lav+ e+rv+l+ +    + LK el+  +++ v+++
  KHJ35075.1  18 TFSADKQTLAVARENRVELYARRGKNFHLKDELKG-HDKIVTSL 60 
                 6799*******************99999*****94.44444445 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.02
                 XXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXXXXXXX.X CS
        IKI3 306 evqsLaWsadSevLavrledr..vqlwtisNyhWYLKqelrysasegveevkWdpekpltLlvltesg 371
                   +s++Ws + +  av    r     ++ + + W++ + ++ + +++ ++v W+p++ l L ++++ +
  KHJ35075.1 100 AATSVRWSPSETKFAVGSGARviAVCYFEEENDWWVSKHIKKPIRSTITTVAWHPNSVL-LAIGST-D 165
                 56778888888888885544432234666777788888888899999999999998766.666655.3 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 0.69
                 XXXXXXXXXXXXXXXXXXXXXX CS
        IKI3 256 gleeaLaWrPsGsliAstqrkk 277
                 g  +a ++ PsG+ +A +++++
  KHJ35075.1 206 GWVHATSFSPSGNALAFAAHDS 227
                 5667889999999999887643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (363 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       411  (0.0229238); expected 358.6 (0.02)
Passed bias filter:                      373  (0.0208043); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 2742.16
//
Query:       KHJ35076.1  [L=555]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.029   13.8   0.0      0.029   13.8   0.0    1.9  3  DUF4746   Domain of unknown function (DUF4746)


Domain annotation for each model (and alignments):
>> DUF4746  Domain of unknown function (DUF4746)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.6e-06     0.029     160     202 ..     121     163 ..     116     165 .. 0.93
   2 ?   -2.7   0.1      0.18   3.2e+03      76     114 ..     192     231 ..     175     250 .. 0.54
   3 ?   -4.2   0.8      0.48   8.7e+03      90     102 ..     511     523 ..     488     542 .. 0.36

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.6e-06
     DUF4746 160 kaaliyvlFraqtekflppdpvpepPhiimaFdasKkkdvaev 202
                 +aa+++++ r+ ++kf + d+ p pP i  +F+ +K++ + ++
  KHJ35076.1 121 EAAALQIYLRQAISKFAAHDSSPTPPPIPSKFQQKKQSGIHNI 163
                 799*********************************9988775 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 0.18
     DUF4746  76 evsseeetlekqekekektkakeaeltade.paeeeeaee 114
                 e+++ +  + ++++  +k+++  +e t+++ +a++ ++ +
  KHJ35076.1 192 ENQTTQLSWATVTQIGQKKARVINESTTKSaQAKNTNHID 231
                 4444444555555554444444444444332333333333 PP

  == domain 3  score: -4.2 bits;  conditional E-value: 0.48
     DUF4746  90 ekektkakeaelt 102
                 ++++ ka +++++
  KHJ35076.1 511 KEAELKAANTKES 523
                 1111111111111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (555 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       935  (0.0521501); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 4142.52
//
Query:       KHJ35077.1  [L=88]
Description: hypothetical protein EV44_g6169 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (88 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       294  (0.016398); expected 358.6 (0.02)
Passed bias filter:                      209  (0.0116571); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 691.55
//
Query:       KHJ35078.1  [L=626]
Description: putative major facilitator superfamily transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-39  136.0  51.5    1.4e-39  136.0  51.5    2.0  2  MFS_1           Major Facilitator Superfamily
    3.6e-12   45.9  33.7    6.9e-11   41.7  16.1    2.6  2  Sugar_tr        Sugar (and other) transporter
  ------ inclusion threshold ------
       0.15   11.8   6.1       0.31   10.8   0.2    3.1  2  CbtA            Probable cobalt transporter subunit (CbtA)
        1.7    9.0   8.1        0.6   10.4   3.5    2.8  2  Transgly_assoc  Transglycosylase associated protein


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.0  51.5   3.2e-43   1.4e-39       2     352 ..     134     536 ..     132     537 .. 0.89
   2 ?   -3.9   0.1       1.1   4.8e+03     240     256 ..     596     611 ..     576     617 .. 0.50

  Alignments for each domain:
  == domain 1  score: 136.0 bits;  conditional E-value: 3.2e-43
       MFS_1   2 llaaflsalarsilgpalplalaedlgispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllllfasslwlllvlrvlqGlga 99 
                 l+++f+++++++i  ++ p  +++ +  s  ++++l t++ l++  +++++G +sd +Gr++ ll++l+++ ++ ++++l a+s++ ++++r+++Glga
  KHJ35078.1 134 LISFFIAIFDSTIMVSSHP-VITSYFE-SSNSASWLSTAFLLTSTGFQPLFGGISDAIGRKKPLLFCLTVLTVAtMWCGL-AQSMTSFILARAFCGLGA 229
                 4556666666666666666.*******.9999******************************777777777777466666.677779************ PP

       MFS_1 100 galfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee.......... 188
                 g++++++ ++i+d++p e rg + ++++++f++G++ g++lgg++a+slgWr+ f i  + +l+++    +   + p++ +  +++ e+          
  KHJ35078.1 230 GGMVSLSSIVISDLVPIEIRGIYQSYINVAFGVGSASGAALGGWIADSLGWRWEFGIQIPTLLICLG---VACIAIPSNLGLAEGVMEKslleavkvfd 325
                 *****************************************************************55...33335555555555555555679999999 PP

       MFS_1 189 .................................................kgtgpaplvpawkallkdpvlwillialllfffgfsglltllplylqevl 238
                                                                  ++++ +p++p   +++ +p    ++++ +l++++ +++ + +pl++q v+
  KHJ35078.1 326 ykgsvllttsitflilglnlggnifpwthpavimsftifmiffplliyvESHAAHPILP-PNIMFQNPRAG-IILINCLGGMVANTVIFNVPLFFQAVM 422
                 9************************************************9999999999.99999999887.7777777778************99999 PP

       MFS_1 239 glsglllaglllallalvgailallagrlsdrlgr.rrrlllallllllaalglallavtssavllllvlvl.iGfglgfvfpsllalasdlappeeag 335
                   s +  +gl l +++l++  ++ l+g+l++ ++  +++l+++l++l++++++l ll  t  +v+++l+l++  ++g+g+++p+ +  + ++ p++e++
  KHJ35078.1 423 LDS-ATNSGLRLLVPSLISSLAGTLVGFLITWTKQmKIYLTIGLVSLFIGSVALSLLQRT-WQVWVYLLLLIpTSLGQGLMYPTTFMSILSVSPQSEQA 519
                 999.8*************************9966669999********************.777777766665888*********************** PP

       MFS_1 336 tasglfntagslggalg 352
                  +++   + +slg+++g
  KHJ35078.1 520 VVTSTLILWRSLGTVFG 536
                 **************998 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 1.1
       MFS_1 240 lsglllaglllallalv 256
                 ++ + +a++l++++ ++
  KHJ35078.1 596 FT-FASAAVLSSICIVI 611
                 22.33333333333333 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.7  16.1   1.5e-14   6.9e-11       9     188 ..     125     297 ..     120     303 .. 0.84
   2 !   10.1   8.8   5.7e-05      0.26      30     156 ..     366     538 ..     345     550 .. 0.78

  Alignments for each domain:
  == domain 1  score: 41.7 bits;  conditional E-value: 1.5e-14
                 HHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGG CS
    Sugar_tr   9 gllfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevliv 107
                 +++  + + +i++f+++ +   +       +s+ ess   +++  +fl+ ++  + ++g ++d +GRkk ll++ +++ ++++ +++a+   s+  +i+
  KHJ35078.1 125 KFWLIFSVSLISFFIAIFDSTIMVSSHPVITSYFESSNSASWLSTAFLLTSTGFQPLFGGISDAIGRKKPLLFCLTVLTVATMWCGLAQ---SMTSFIL 220
                 577777778888888777777777666666666667778888888888888888888888*****************************...9****** PP

                 GHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHG CS
    Sugar_tr 108 gRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllill 188
                 +R ++G+g+G+   l+++ is + p ++Rg+  s+ ++a  +G   +a +g  ++++ +   wr+ +g+q+ p+ll+++++
  KHJ35078.1 221 ARAFCGLGAGGMVSLSSIVISDLVPIEIRGIYQSYINVAFGVGSASGAALGGWIADSLG---WRWEFGIQI-PTLLICLGV 297
                 ******************************99999998888888888877777777666...*******95.777887776 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 5.7e-05
                 HTSTT--SHHHHHH................................................HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHH.H CS
    Sugar_tr  30 knfglsksksskee.............................................ssvlsglivsiflvGaiiGslfagllgdrfGRkkslli.a 82 
                  +f l  +++s+++                                             s++ sgl + + ++++ + + ++g+l+++    k++l+ +
  KHJ35078.1 366 IFFPLLIYVESHAAhpilppnimfqnpragiilinclggmvantvifnvplffqavmldSATNSGLRLLVPSLISSLAGTLVGFLITWTKQMKIYLTiG 464
                 55555556665555666666666666666666666666666666666666666666666788899999999****************999988888746 PP

                 HHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHH CS
    Sugar_tr  83 avlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaai 156
                  v ++ig+v   + + +++v+v+++  + + +g Gl + ++ m i  ++p++    ++s   l+ ++G +++  
  KHJ35078.1 465 LVSLFIGSVALSLLQRTWQVWVYLLLLIPTSLGQGLMYPTTFMSILSVSPQSEQAVVTSTLILWRSLGTVFGVS 538
                 67789********************************************9998888888877777777777654 PP

>> CbtA  Probable cobalt transporter subunit (CbtA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.2   6.9e-05      0.31     157     239 ..     262     346 ..     251     349 .. 0.84
   2 ?    1.9   1.3     0.035   1.6e+02     222     241 ..     519     538 ..     459     540 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 6.9e-05
        CbtA 157 valalavflarrlaar.g.wnavlaaavaflvlvavallalPhvveaPqpeaaesgfpaallaqFrvaslltqavlWavlGlvfg 239
                 v+ a  ++l+ ++a++ g   ++ + + ++l++++va++a+P+  +  +    +s + a  + ++  ++llt+ + +++lGl +g
  KHJ35078.1 262 VGSASGAALGGWIADSlGwRWEFGIQIPTLLICLGVACIAIPSNLGLAEGVMEKSLLEAVKVFDYKGSVLLTTSITFLILGLNLG 346
                 5566667777788888786667888889999***************9996666699999999*******************9877 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.035
        CbtA 222 aslltqavlWavlGlvfgal 241
                 a++ ++++lW +lG+vfg+ 
  KHJ35078.1 519 AVVTSTLILWRSLGTVFGVS 538
                 788999***********985 PP

>> Transgly_assoc  Transglycosylase associated protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   3.5   0.00013       0.6       7      40 ..     267     301 ..     266     302 .. 0.94
   2 ?   -3.6   0.1       3.1   1.4e+04      16      31 ..     529     543 ..     526     544 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00013
  Transgly_assoc   7 GAfvGgfllgllgi.gvgggelaslivaiiGAiIL 40 
                     GA +Gg+++++lg+    g+++ +l++++  A+I 
      KHJ35078.1 267 GAALGGWIADSLGWrWEFGIQIPTLLICLGVACIA 301
                     9*************9999*********99999995 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 3.1
  Transgly_assoc  16 gllgigvgggelasli 31 
                     ++lg  v g +l+sli
      KHJ35078.1 529 RSLGT-VFGVSLSSLI 543
                     66777.8888998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (626 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.22s 00:00:00.83 Elapsed: 00:00:00.38
# Mc/sec: 4900.10
//
Query:       KHJ35079.1  [L=631]
Description: putative dna mismatch repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.9e-98  327.3   0.0    1.1e-97  326.6   0.0    1.3  1  Mlh1_C          DNA mismatch repair protein Mlh1 C-terminus
    1.7e-32  111.6   0.0    3.3e-32  110.7   0.0    1.5  1  DNA_mis_repair  DNA mismatch repair protein, C-terminal domai


Domain annotation for each model (and alignments):
>> Mlh1_C  DNA mismatch repair protein Mlh1 C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  326.6   0.0  1.2e-101   1.1e-97       2     270 .]     374     631 .]     373     631 .] 0.96

  Alignments for each domain:
  == domain 1  score: 326.6 bits;  conditional E-value: 1.2e-101
                 -HHHHHHHHHHHHHB-HHHHHHHHT-EEEEEEET..TEEEEEETTEEEEEEHHHHHHHHHHHHHHHHTT--EEEE-G-.-BHHHHHTTS-SHH...... CS
      Mlh1_C   2 ltsvkelraeveesahkeLteilanltfVGlvde..rlaliQhgtkLylvdygalskelfyqllLtdFgnfgeikLeeplslkeLlelaleeeeeeeee 98 
                 l  +kelraev++++h+eLtei+a++tfVG+vde  r+a+iQ g++L+lvdyg l++e+fyq++LtdFgnfg i++++pl+lk++l la++ e+ + + 
  KHJ35079.1 374 LMTIKELRAEVRNEIHNELTEIFASHTFVGVVDErrRVAAIQGGVRLFLVDYGILCNEYFYQVGLTDFGNFGVIQFDPPLDLKDILILAAQVEKMRVQP 472
                 789********************************9*****************************************************9999977766 PP

                 ...........HHHHHHHHHHHTHHHHHHHH--EETT-EEEEEEEE-STT----STTHHHHHHHHHHTS-TTSHHHHHHHHHHHHHHHHS----.---. CS
      Mlh1_C  99 eseeedkskeelaekivelLiekaemLeeyFsieidedgellslPlllkgytpslekLPlfllrLateVdWeeekeCfetilrelAlfyapeqlpekee 197
                 ++ e+d ++ee++e++ + Li+++emL eyFs+ei+edg l+s+Plllkgytpsl+kLP f+lrL+++V W++ekeCf+t+lrelA++y+peqlp++  
  KHJ35079.1 473 DT-EDDFDIEEVVETVLNELIDHREMLLEYFSLEISEDGMLISIPLLLKGYTPSLAKLPSFFLRLGPYVTWTSEKECFSTFLRELAAYYVPEQLPST-- 568
                 55.77789**************************************************************************************874.. PP

                 ...-T.T-...TTS-HHHHHHHHHHHHHHHHHHHHTHHHHHHHH---BGGGGG..GEEEEEEHHHHHHHS--- CS
      Mlh1_C 198 seekaseeekeeeeeeeeeeeaeerreelkwvlehvlfpaikarllppksllkdgtvvevasledLYkVFERC 270
                          +e++++ + ++ +e+rr+e+++++e+vlfpa+k+rl+++k++l+ g+vveva+l++LYkVFERC
  KHJ35079.1 569 ---------SEQDDQIDLDDPIETRRREINHAIENVLFPAFKSRLIATKAMLN-GAVVEVANLKGLYKVFERC 631
                 .........345566788999********************************.8****************** PP

>> DNA_mis_repair  DNA mismatch repair protein, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.7   0.0   3.7e-36   3.3e-32       1     118 [.     160     278 ..     160     279 .. 0.95

  Alignments for each domain:
  == domain 1  score: 110.7 bits;  conditional E-value: 3.7e-36
                     HHHHHHHHHHCCEEEEEEEETT..EEEEEEEE-CCG-BTTGGEEEEEETTEEE--HHHHHHHHHHHHCCSSSSSB-EEEEEEEESSGGEE-TSST CS
  DNA_mis_repair   1 iaavlgkevaenlleiekeeeq..lkieGfiskpelsrskrdkqflfvNgRlvkskelkkaireaYkellpkgrypvvvLnleidpeevDvNvhP 93 
                     i+++ g++va++l+e++++++   +  +G+ ++++++ +k ++ +lf+N+Rlv+s+ ++kai+++Y+++lpkg +p+++L+leidp++vDvNvhP
      KHJ35079.1 160 IRQIHGSAVANELIEFTSSDKIygYCASGWTTTANFHVKK-TTLLLFINHRLVDSTIIRKAIEQTYSTFLPKGGHPFTYLSLEIDPQRVDVNVHP 253
                     689**************8888778999********99988.899*************************************************** PP

                     T----EETTHHCHHHHHHHHHHHHH CS
  DNA_mis_repair  94 tKreVrfqdeeevieaieealkeal 118
                     tKreV f +eee+i++i + ++  l
      KHJ35079.1 254 TKREVNFLNEEEIISQICSDIRAKL 278
                     *******************998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (631 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       515  (0.0287244); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.37
# Mc/sec: 5116.57
//
Query:       KHJ35080.1  [L=429]
Description: putative dihydrolipoamide acetyltransferase component e2 of pyruvate dehydrogenase complex [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.1e-71  238.8   0.0    7.7e-71  238.2   0.0    1.2  1  2-oxoacid_dh   2-oxoacid dehydrogenases acyltransferase (cata
      1e-17   63.7   1.8    1.3e-17   63.4   0.6    1.9  2  Biotin_lipoyl  Biotin-requiring enzyme
      1e-08   35.3   0.2    2.6e-08   34.1   0.2    1.7  1  E3_binding     e3 binding domain


Domain annotation for each model (and alignments):
>> 2-oxoacid_dh  2-oxoacid dehydrogenases acyltransferase (catalytic domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  238.2   0.0   1.3e-74   7.7e-71       5     233 .]     197     429 .]     194     429 .] 0.96

  Alignments for each domain:
  == domain 1  score: 238.2 bits;  conditional E-value: 1.3e-74
                   XXXXXXXXXXXXXXXXXXXX.XXXEEEEEEEEE-HHHHHHHHHHHHHHHHTT-----HHHHHHHHHHHHHHH-GGGG-EE.EESEEEE--SS--EEE CS
  2-oxoacid_dh   5 ervplsgirkaiakrlteskqeiphftlsdevdvtallelrkelkekeakeekakltlldflikavalAlkefPelnasvdeeekeivvkkhvniGv 101
                    ++p++ +r++ia+rl +s ++ phf +  ++ vt+ll+lr+ l+e+   +  +kl+++dflika++ A+k++P +n+s+ +    i++ ++v+i+v
    KHJ35080.1 197 VDIPVTSMRNTIANRLVQSVNQNPHFFVAATISVTKLLKLRNALNESSGGK--YKLSVNDFLIKAASVACKKVPTVNSSWRDGF--IRQFSNVDISV 289
                   679*******************************************99644..5**************************8888..*********** PP

                   E--------EEEE--GGG--HHHHHHHHHHHHHHHTTT---GGGTSS-SEEEE------.---------TT-SEEEEE---.B--TTSTT-...... CS
  2-oxoacid_dh 102 AvatprGLlvPviknadkkslleiakelkelaekaregklkpedleggtftisNlGmlG.vtsftPiinppqvaIlgvgrikerpvvkege...... 191
                   Avatp+GL++P++k +++++l++i++ +k+l ++ar+gklkpe+++ggtftisN+Gm   ++ ft++inppq+ Il+vg+ik+++v  e e      
    KHJ35080.1 290 AVATPTGLVTPIVKSVETLGLASISALVKDLGKRARDGKLKPEEYQGGTFTISNMGMNPaIDRFTAVINPPQAGILAVGTIKKVAVPLEAEstddvn 386
                   **********************************************************88*********************9999985555599*** PP

                   .HT---EEEEEEEEETTT--HHHHHHHHHHHHHTT-HHXXXXX CS
  2-oxoacid_dh 192 .lvvrkvmtlslsaDHRvidGaeaarFlntlkkllenpeelll 233
                    ++    + ++ s+DH+v+dGa + ++++++kk++enp  l+l
    KHJ35080.1 387 kFEWDDQIVVTGSFDHKVVDGAIGGEWIKEFKKVVENPLDLML 429
                   ***************************************9985 PP

>> Biotin_lipoyl  Biotin-requiring enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.4   0.6   2.2e-21   1.3e-17       5      73 .]       1      71 [.       1      71 [. 0.98
   2 ?   -3.2   0.0       1.3   7.6e+03      51      59 ..     368     376 ..     366     380 .. 0.81

  Alignments for each domain:
  == domain 1  score: 63.4 bits;  conditional E-value: 2.2e-21
                   ESSSEEEEEE..ECSESSSTTCEE-TTSEEEEEECTTEEEEEEBSSSEEEEEESSTTTEE.E-TTCEEEEE CS
  Biotin_lipoyl  5 sPmiGesveeg.vvevlvkvGdkVkagqvlaeveamKmemeieapkaGvvkeilvkeGdt.vevgdllaki 73
                   +P++++++++g + ++++k+Gd+++ g+vl+e+e++K++m++e +++Gv+++il+++G++ + vg ++a++
     KHJ35080.1  1 MPALSPTMTAGnIGAWKKKTGDSIAPGDVLVEIETDKAQMDFEFQEDGVLAKILKESGEKdIAVGNPIAVM 71
                   89******************************************************************985 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.3
                    EEEEEESST CS
  Biotin_lipoyl  51 Gvvkeilvk 59 
                    G++k++ v+
     KHJ35080.1 368 GTIKKVAVP 376
                    999999987 PP

>> E3_binding  e3 binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.1   0.2   4.3e-12   2.6e-08       6      36 .]     149     179 ..     146     179 .. 0.94

  Alignments for each domain:
  == domain 1  score: 34.1 bits;  conditional E-value: 4.3e-12
                 HHHHHHHHCT--TTTS---CTTTBE-HHHHC CS
  E3_binding   6 aaRklAkelGidLsdvkGtGpgGRItkeDVl 36 
                 +a +lA+e  id+s++kGtG +G It++DV+
  KHJ35080.1 149 SAVRLAREGSIDISTIKGTGNHGQITEADVR 179
                 5779**************************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.19s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 3551.40
//
Query:       KHJ35081.1  [L=101]
Description: putative dna mismatch repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.7e-07   30.1   0.0    5.1e-07   29.6   0.0    1.2  1  HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like
    0.00064   20.2   0.1    0.00091   19.7   0.1    1.2  1  HATPase_c    Histidine kinase-, DNA gyrase B-, and HSP90-like


Domain annotation for each model (and alignments):
>> HATPase_c_3  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.0   5.7e-11   5.1e-07       4      46 ..      58      98 ..      55     101 .] 0.90

  Alignments for each domain:
  == domain 1  score: 29.6 bits;  conditional E-value: 5.7e-11
  HATPase_c_3  4 ekAlaelvdNsldAdaenvkievnknrgktgeivieDdGkGms 46
                   Al el++N++dA +++ +i v++     + ++i+D+G+G++
   KHJ35081.1 58 VHALKELIENAVDAGSTSLEILVKEG--GLKFLQITDNGHGIN 98
                 579*********************95..5799*********96 PP

>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.1     1e-07   0.00091       7      51 ..      58      99 ..      53     101 .] 0.81

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 1e-07
                HHHHHHHHHHHHHHHSTTTEEEEEEEEEE.TEEEEEEEESSSSSTT CS
   HATPase_c  7 rqiisnlvdNavkfatkageieveikase.ddlvisveDnGiGipk 51
                 +++++l++Nav++   ++++e+ +k  e + + ++++DnG Gi++
  KHJ35081.1 58 VHALKELIENAVDA--GSTSLEILVK--EgGLKFLQITDNGHGINV 99
                699**********7..5677888888..6356677*********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (101 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.25s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 767.09
//
Query:       KHJ35082.1  [L=500]
Description: hypothetical protein EV44_g6150 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.1e-102  344.4   0.2   1.4e-102  344.0   0.2    1.2  1  Mit_ribos_Mrp51  Mitochondrial ribosomal protein subunit


Domain annotation for each model (and alignments):
>> Mit_ribos_Mrp51  Mitochondrial ribosomal protein subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  344.0   0.2    8e-107  1.4e-102       1     363 [.       6     413 ..       6     415 .. 0.88

  Alignments for each domain:
  == domain 1  score: 344.0 bits;  conditional E-value: 8e-107
  Mit_ribos_Mrp51   1 lsplaaLLRnSRLfslpkplpppa......lsasdtatlpyPthqaItTpksslargdWGLKrslPlksttskvsspvirvnalDtiehitdfe 88 
                      lsp++aLLR+S+ fs+pkp+p+p       +s s+t+t  +P h +ItTp ssl++gdWGLKr+lP ++tt k+s p +r++a+Dt+e+it+f 
       KHJ35082.1   6 LSPGGALLRRSKAFSIPKPIPRPVdtritnQSVSKTSTSSFPSHLSITTPLSSLKEGDWGLKRPLPVRTTT-KSSYPSVRIEAIDTVEKITSFR 98 
                      59********************99****99888999***********************************.********************** PP

  Mit_ribos_Mrp51  89 saadhtltlkkfqElgipl....kssekeakakkSvFeeeadvt..sekakekedkrwkfkgPllagmtegelseylkkkvrkrrkeFkkfLre 176
                      s++dh++tl+k+qEl++p     +  ++ + ++ SvFe+e+d++  ++++++k+++rwkfkgP++ g +ege+s y+k++v++r++eF+++Lr+
       KHJ35082.1  99 SSGDHAITLQKWQELDLPFtqnkQYPSDVRPSRISVFEDEVDNIekRSDDNNKDNYRWKFKGPWFGGLSEGEFSVYMKTQVQARKREFQDYLRN 192
                      *******************887555566778899**********77777888999*************************************** PP

  Mit_ribos_Mrp51 177 klaeektaearraalekge..ealkek.....iseeelkeylkklradrqklyklvseFLdlaplkske.aaeekasaelskakr......... 253
                      ++a+ kt+e+r++ + ++   e +  k     i+++e+   +kklr++r +ly+l++ FLdl+p+   +    + + ++l  +++         
       KHJ35082.1 193 ECARAKTSETRNNYISESVdgEIP--KfeasdITDKEYALFVKKLRSQRVQLYRLIRSFLDLPPAIFADvYDPTLTLHSLFGQNNneknnsqdt 284
                      *******99999999988865333..334779********************************988775444444444433333556788899 PP

  Mit_ribos_Mrp51 254 ....eqgppkthpsaGLsYlrtgaylenhPlygpqkqktpvpaRvlsprtsatg.eskaklgvGGfva...........ndpssstsaskvs.. 329
                           ++ppkthpsaGL Y rt++++ nhP++gpq  k+pv+aRv+ p++   + +++a +g+ Gf+                        +  
       KHJ35082.1 285 qkssGTAPPKTHPSAGLYYGRTSNFMFNHPEFGPQVVKPPVKARVILPKNVFGSqSHTALIGISGFIMgippnidstfvF-----------Kkg 367
                      999999*********************************************98856999*********555444433330...........345 PP

  Mit_ribos_Mrp51 330 ............agleaidpdlergakipvevkeasvdsdGrirle 363
                                  +gl+++d++ e g k +++  +a+++ +G+++++
       KHJ35082.1 368 fkdngqfayskfPGLHSLDQSEETGCKSWIQCLHAELNAEGNVHVK 413
                      5666677777779******************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (500 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 3853.08
//
Query:       KHJ35083.1  [L=1054]
Description: putative elongation factor 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.4e-47  160.9   0.1    1.6e-23   83.8   0.0    4.0  2  ABC_tran        ABC transporter
    2.6e-30  104.3   0.2      6e-29   99.9   0.1    2.7  2  4HB             Four helical bundle domain
    2.6e-17   63.6   0.5     0.0021   17.9   0.0    5.2  5  AAA_21          AAA domain, putative AbiEii toxin, Type IV TA
    1.5e-15   57.3   0.0    1.8e-05   24.3   0.0    4.0  3  SMC_N           RecF/RecN/SMC N terminal domain
    4.7e-10   40.3   3.5    0.00019   22.0   0.0    3.1  2  AAA_23          AAA domain
      1e-08   34.8   0.1     0.0047   16.6   0.0    2.5  2  AAA_29          P-loop containing region of AAA domain
    1.6e-07   31.4   0.0     0.0012   19.0   0.0    2.8  2  MMR_HSR1        50S ribosome-binding GTPase
    1.9e-07   31.1   0.0     0.0023   17.9   0.0    2.8  2  RsgA_GTPase     RsgA GTPase
    8.3e-07   29.4   0.0      0.011   16.0   0.0    3.4  2  AAA_22          AAA domain
    1.2e-06   28.7   0.0    7.4e-05   22.9   0.0    2.8  2  Dynamin_N       Dynamin family
    1.3e-06   28.7   0.0       0.02   15.2   0.0    2.7  2  AAA_28          AAA domain
    1.4e-05   25.7   0.0       0.21   12.1   0.0    3.1  2  AAA_18          AAA domain
    4.4e-05   23.8   0.0       0.53   10.7   0.0    2.8  2  RNA_helicase    RNA helicase
    5.3e-05   23.7   0.1       0.68   10.4   0.0    4.2  3  AAA             ATPase family associated with various cellula
    6.7e-05   23.1   0.0       0.45   10.7   0.0    3.0  2  AAA_33          AAA domain
    9.1e-05   22.9   0.2       0.81   10.1   0.0    3.7  2  AAA_16          AAA ATPase domain
    9.7e-05   22.3   0.5        3.2    8.3   0.0    4.3  3  HEAT            HEAT repeat
    0.00013   21.0   0.1       0.36    9.8   0.0    2.5  2  MeaB            Methylmalonyl Co-A mutase-associated GTPase M
    0.00015   21.6   6.2      0.057   13.1   0.0    3.8  3  AAA_15          AAA ATPase domain
    0.00035   20.3   0.0        1.7    8.3   0.0    3.2  3  AAA_30          AAA domain
    0.00036   19.8   0.1        0.9    8.6   0.0    3.1  3  G-alpha         G-protein alpha subunit
    0.00053   19.6   0.0       0.35   10.4   0.0    2.6  2  AAA_27          AAA domain
    0.00075   19.3   0.0       0.65    9.7   0.0    3.0  2  PduV-EutP       Ethanolamine utilisation - propanediol utilis
    0.00089   19.2   0.0       0.25   11.2   0.0    2.5  2  NACHT           NACHT domain
     0.0009   19.4   2.3       0.91    9.6   0.0    3.9  3  DUF87           Helicase HerA, central domain
     0.0014   18.4   0.0        1.4    8.6   0.0    2.8  2  AAA_24          AAA domain
     0.0015   18.5   0.1        3.7    7.6   0.0    3.4  3  AAA_14          AAA domain
     0.0038   17.6   0.3        2.9    8.4   0.1    3.5  2  HEAT_2          HEAT repeats
     0.0042   17.0   0.2        2.6    7.9   0.0    3.4  2  ATPase_2        ATPase domain predominantly from Archaea
     0.0045   16.6   0.0        3.7    7.1   0.0    3.2  3  cobW            CobW/HypB/UreG, nucleotide-binding domain
      0.005   16.8   0.0          4    7.3   0.0    2.5  2  Rad17           Rad17 P-loop domain
     0.0077   16.0   0.0       0.22   11.2   0.0    2.3  2  PRK             Phosphoribulokinase / Uridine kinase family
     0.0089   15.2   0.0       0.45    9.7   0.0    2.5  2  NB-ARC          NB-ARC domain
  ------ inclusion threshold ------
      0.016   15.0   0.3        7.6    6.2   0.0    2.7  2  ATP_bind_1      Conserved hypothetical ATP binding protein
      0.018   14.8   0.0        5.5    6.7   0.0    2.9  2  IstB_IS21       IstB-like ATP binding protein
       0.02   15.1   0.0         10    6.4   0.0    2.8  2  Roc             Ras of Complex, Roc, domain of DAPkinase
      0.022   14.3   0.0        4.6    6.7   0.0    2.3  2  AAA_7           P-loop containing dynein motor region
      0.033   14.4   0.0        6.5    7.1   0.0    3.0  2  SbcCD_C         Putative exonuclease SbcCD, C subunit
      0.034   13.9   1.5       0.84    9.4   0.0    2.8  2  CLP1_P          mRNA cleavage and polyadenylation factor CLP1
      0.036   13.3   0.3        3.8    6.7   0.0    2.8  3  Septin          Septin
      0.044   13.5   0.0        8.7    6.0   0.0    2.5  2  Cytidylate_kin  Cytidylate kinase
      0.057   12.8   0.2        4.9    6.5   0.0    3.0  3  Mg_chelatase    Magnesium chelatase, subunit ChlI
      0.061   13.2   0.1         15    5.5   0.0    2.8  2  NTPase_1        NTPase
      0.065   12.3   0.0        4.8    6.2   0.0    2.5  2  T2SSE           Type II/IV secretion system protein
      0.066   12.8   0.0         14    5.3   0.0    2.3  2  ATP-synt_ab     ATP synthase alpha/beta family, nucleotide-bi
       0.07   12.4   0.0         15    4.8   0.0    2.9  2  Zeta_toxin      Zeta toxin
       0.11   12.4   0.0         21    5.0   0.0    2.5  2  Ploopntkinase3  P-loop Nucleotide Kinase3
       0.13   11.4   0.0         11    5.1   0.0    2.6  2  DUF815          Protein of unknown function (DUF815)
       0.14   11.7   0.2        1.2    8.6   0.1    2.3  2  FeoB_N          Ferrous iron transport protein B
       0.15   12.6   1.0         38    4.9   0.0    4.2  3  HEAT_EZ         HEAT-like repeat
       0.15   11.8   0.1         26    4.5   0.0    2.5  2  MukB            MukB N-terminal
        2.1    6.9  10.8          3    6.4   0.0    4.1  4  AAA_13          AAA domain


Domain annotation for each model (and alignments):
>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.4   0.0     3e-22     1e-19       1     137 []     453     584 ..     453     584 .. 0.75
   2 !   83.8   0.0   4.6e-26   1.6e-23       2     137 .]     697     937 ..     696     937 .. 0.71

  Alignments for each domain:
  == domain 1  score: 71.4 bits;  conditional E-value: 3e-22
                 EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--...SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHHHHHTCHHHHHHHSTTGG CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   1 lknvslklkegekvaivGenGaGKStLlkllagllkp...teGeilldgkdlkeqeleslrkeigvlpqepqlfpeltvrenesdeeiekalsklglke 96 
                 l++ +l lk+g+++++ G+nG+GKStL++++ ++      ++ e+   ++ + e++l s++ e+ ++  +  +++  +v+ ++ ++++ek l ++g + 
  KHJ35083.1 453 LNQTHLRLKRGQRYGLCGPNGSGKSTLMRAINNEQVEgfpKKNEV---KTVFVEHDLDSADTELTTIDWT--MKKLAEVGISTPQADVEKQLGEFGFSP 546
                 67889***************************9976434455555...3333345666666666666555..444444555577777888888888766 PP

                 TTCBGESTTSGGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  97 lkdtvvksspssLSgGqkqrvalarallkkpkllllDEpta 137
                 + ++++    + LSgG+k ++alara++++p++lllDEpt+
  KHJ35083.1 547 DMTNNL---ITALSGGWKMKLALARAVFENPDILLLDEPTN 584
                 444444...7******************************8 PP

  == domain 2  score: 83.8 bits;  conditional E-value: 4.6e-26
                 EEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSS--SEEEE.....................EETTCEGGGB-HHHCCHCEEEE-SS--S-TTSBHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   2 knvslklkegekvaivGenGaGKStLlkllagllkpteGei.....................lldgkdlkeqeleslrkeigvlpqepqlfpeltvren 79 
                 ++++++++ g+++a++G+nGaGKStL+++l+g+l pt+G++                     +l+++++++         i++ +q+            
  KHJ35083.1 697 SDINFQCSLGSRIAVIGPNGAGKSTLINVLTGELIPTSGDVytheniriayikqhafahidhHLEKTPSEY---------IQWRFQT-----------G 775
                 689**************************************655555555333333222222222222222.........2222222...........0 PP

                 ................................................................................................HHH CS
                 ................................................................................................xxx RF
    ABC_tran  80 ................................................................................................esd 82 
                                                                                                                 e  
  KHJ35083.1 776 edretmdrankivtdedenamlkiykiegtqrrvigihsrrkfknsyeyecsfalgenigmknerwvpmmtadnawiprseilashqkmvaevdqkE-- 872
                 2223344445677777788888888889999*****************************9999999999999999988888777776666544430.. PP

                 TC.............HHHHHHHSTTGGTTCBGESTTS.GGS-HHHHHHHHHHHHHHHTSSEEEEESTTT CS
                 xx.............xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  83 ee.............iekalsklglkelkdtvvkssp.ssLSgGqkqrvalarallkkpkllllDEpta 137
                                ie   +++g   l+++ v++s    LSgGq+++v+la++ +++p l++lDEpt+
  KHJ35083.1 873 -AlasgqfrplvrkeIESHCANFG---LDAELVSHSRmVGLSGGQRVKVVLAACSWQRPHLIVLDEPTN 937
                 .04444445555222444444444...555555444459*****************************8 PP

>> 4HB  Four helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0         1   3.6e+02      44      77 ..      26      60 ..      18      61 .. 0.83
   2 !   99.9   0.1   1.7e-31     6e-29       1      78 []     341     418 ..     341     418 .. 0.99

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 1
         4HB 44 eidsaaWvenlkpyvtvivgekea.keivdelRkr 77
                ++d ++ ++nl  +++  ++e++a   +vd++Rk+
  KHJ35083.1 26 QADINSATHNLAVFINSPIEEHDApTRTVDAFRKQ 60
                667777789999*********9994469*****96 PP

  == domain 2  score: 99.9 bits;  conditional E-value: 1.7e-31
         4HB   1 GdietvlailkeilkskkkkvaekfepvleYiaAiAgqLiDekeidsaaWvenlkpyvtvivgekeakeivdelRkrA 78 
                 G+i tvl ilk+il+ k+k+++++fepvl Y+aAiAgqLiDek++ds +W+++lkpy+++++ +++a+e+vd lRkrA
  KHJ35083.1 341 GHILTVLPILKDILSVKHKSISQRFEPVLIYVAAIAGQLIDEKDADSITWTTALKPYLSALISNSDAQEVVDLLRKRA 418
                 8999*************************************************************************9 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   6.2e-06    0.0021       3      19 ..     467     483 ..     466     512 .. 0.85
   2 !   12.4   0.0   0.00029     0.098     242     302 ..     561     615 ..     552     616 .. 0.73
   3 !   14.6   0.1   6.3e-05     0.022       3      26 ..     710     727 ..     709     751 .. 0.77
   4 ?    0.7   0.0       1.1   3.7e+02      35      87 ..     805     858 ..     799     868 .. 0.87
   5 !   10.4   0.0    0.0012      0.42     255     300 ..     926     966 ..     905     969 .. 0.81

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 6.2e-06
      AAA_21   3 vliGpNgsGKSnLLdal 19 
                 +l GpNgsGKS+L++a+
  KHJ35083.1 467 GLCGPNGSGKSTLMRAI 483
                 699************** PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.00029
      AAA_21 242 krllalltallralkkgsllliDEpEngLHPkllrrllell..kelsrngaQviltTHSplll 302
                 k  lal+ a+++ +   ++ll+DEp n+L+ k ++ l + l  + +++     i+++H++ +l
  KHJ35083.1 561 KMKLALARAVFENP---DILLLDEPTNHLDVKNVKWLEDYLinSPCTS-----IIVSHDTGFL 615
                 55567777778777...9*************99999986665666666.....7777776655 PP

  == domain 3  score: 14.6 bits;  conditional E-value: 6.3e-05
      AAA_21   3 vliGpNgsGKSnLLdaldllarld 26 
                 ++iGpNg+GKS+L+  l       
  KHJ35083.1 710 AVIGPNGAGKSTLINVL------T 727
                 79************999......3 PP

  == domain 4  score: 0.7 bits;  conditional E-value: 1.1
      AAA_21  35 elsggggirkipslldlydpeipfefeieeflsqgvryryglrlersqv..eekl 87 
                 ++++  gi + +++ ++y+ e +f+++ +  ++++ r+   ++ ++ ++  +e l
  KHJ35083.1 805 TQRRVIGIHSRRKFKNSYEYECSFALGEN-IGMKNERWVPMMTADNAWIprSEIL 858
                 567788899999999**************.*****************99665555 PP

  == domain 5  score: 10.4 bits;  conditional E-value: 0.0012
      AAA_21 255 lkkgsllliDEpEngLHPkllrrllellkelsrngaQviltTHSpl 300
                 ++   l+++DEp n L+   l  l + +k+ +     vi+ THS +
  KHJ35083.1 926 RP--HLIVLDEPTNYLDRDSLGALSKAIKSFEG---GVIIITHSAE 966
                 33..79*************************99...********86 PP

>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.1   0.00033      0.11      28      44 ..     467     483 ..     450     485 .. 0.84
   2 !   15.8   0.0   2.1e-05    0.0071      73     205 ..     491     618 ..     483     629 .. 0.74
   3 !   24.3   0.0   5.3e-08   1.8e-05      27     205 ..     709     971 ..     699     984 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00033
                 EEEESTTSSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxx RF
       SMC_N  28 aivGpNGSGKsnlldAi 44 
                  + GpNGSGKs l+ Ai
  KHJ35083.1 467 GLCGPNGSGKSTLMRAI 483
                 589*************9 PP

  == domain 2  score: 15.8 bits;  conditional E-value: 2.1e-05
                 STTEEEEEEEEEETTEESSSSSSCEEEEEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT.......CS-HHHHHHHHHHHHHHHHCCS--SEEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  73 svkkaeveitfdnedkklkiekeevsisrrvkrkgeseykingkevtkkevsellesagiske.......lLSgGektLvalaLlfAiqkvkpaplyll 164
                 + kk ev+ +f ++d + + ++e ++i  ++k+  e      g +  +++v+++l + g+s++       +LSgG k    + L +A   ++   + ll
  KHJ35083.1 491 FPKKNEVKTVFVEHDLD-SADTELTTIDWTMKKLAE-----VGISTPQADVEKQLGEFGFSPDmtnnlitALSGGWK----MKLALARAVFENPDILLL 579
                 55666666666666665.444455555555554444.....344567788888999999988899999999****98....4555566677888899** PP

                 CTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 165 DeidaaLDeknvkkvaellkeksknaQfivislreemleka 205
                 De   +LD knvk + ++l ++   +  i++s+++++l+++
  KHJ35083.1 580 DEPTNHLDVKNVKWLEDYLINSP--CTSIIVSHDTGFLNNV 618
                 *******************9998..999*******999987 PP

  == domain 3  score: 24.3 bits;  conditional E-value: 5.3e-08
                 EEEEESTTSSHHHHHHHHHHHCTT......TTTTTTCHCCCCCC--..BTTCSSTTEEEEEEEEEETTEESSSSSSCEEEEEEEETTSEEEEEETTEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  27 taivGpNGSGKsnlldAilFvLGer.....sakklrseklsdlihk..skekasvkkaeveitfdnedkklkiekeevsisrrvkrkgeseykingkev 118
                  a++GpNG+GKs l++ +   L  +     + +++r + +++  ++   ++ +++ + +++  f+  ++++++++ +  ++ + ++     yki+g+  
  KHJ35083.1 709 IAVIGPNGAGKSTLINVLTGELIPTsgdvyTHENIRIAYIKQHAFAhiDHHLEKTPSEYIQWRFQTGEDRETMDRANKIVTDEDENAMLKIYKIEGT-- 805
                 589*************997766444011123344555554444444444555556666777777666666555555555544444444445555544.. PP

                 -HHHHHHHHHCTT-STT.................................................................................. CS
                 xxxxxxxxxxxxxxxxx.................................................................................. RF
       SMC_N 119 tkkevsellesagiske.................................................................................. 135
                  ++ v  + ++ +++ +                                                                                  
  KHJ35083.1 806 -QRRVIGIHSRRKFKNSyeyecsfalgenigmknerwvpmmtadnawiprseilashqkmvaevdqkealasgqfrplvrkeieshcanfgldaelvsh 903
                 .4445555555555555778999**************************************************************************** PP

                 ....CS-HHHHHHHHHHHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC- CS
                 ....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N 136 ....lLSgGektLvalaLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemleka 205
                      LSgG++    + +++A  + ++  l +lDe    LD     ++++ +k+ +    +i+i++++e++++ 
  KHJ35083.1 904 srmvGLSGGQR----VKVVLAACSWQRPHLIVLDEPTNYLDRDSLGALSKAIKSFE--GGVIIITHSAEFTKDL 971
                 **********9....57788888999999************************999..99********999876 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0   9.6e-06    0.0033      24      40 ..     468     484 ..     454     515 .. 0.92
   2 !   22.0   0.0   5.6e-07   0.00019      21     120 ..     709     818 ..     695     872 .. 0.73

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 9.6e-06
      AAA_23  24 ItGpNGaGKTTildAik 40 
                 ++GpNG+GK+T+++Ai 
  KHJ35083.1 468 LCGPNGSGKSTLMRAIN 484
                 79*************95 PP

  == domain 2  score: 22.0 bits;  conditional E-value: 5.6e-07
      AAA_23  21 ltlItGpNGaGKTTildAiklaLygetprlsrks.......grgfeksdve...iesegkvkayveltfenkdgry.....trsiererelskkkgktt 104
                 + +++GpNGaGK+T+++ ++  L   +++  + +       +    ++ ++    + e++ ++y++ +f++  +r+     ++++++e e++  k  ++
  KHJ35083.1 709 I-AVIGPNGAGKSTLINVLTGELIPTSGDVYTHEniriayiK----QHAFAhidHHLEKTPSEYIQWRFQTGEDREtmdraNKIVTDEDENAMLKIYKI 802
                 4.567************9998888765555444444433332....444433222333688999****9998888889998777777777777777777 PP

      AAA_23 105 kkaklelleideleqf 120
                  +++++ ++i  +++f
  KHJ35083.1 803 EGTQRRVIGIHSRRKF 818
                 7777777777655554 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   1.4e-05    0.0047      16      43 ..     457     484 ..     452     485 .. 0.78
   2 !   15.4   0.1   3.3e-05     0.012      23      46 ..     707     730 ..     696     738 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.4e-05
      AAA_29  16 tieidlkgatlltGpsGsGKSTllDAiq 43 
                  +++++ + + l Gp+GsGKSTl+ Ai+
  KHJ35083.1 457 HLRLKRGQRYGLCGPNGSGKSTLMRAIN 484
                 566664448889************9885 PP

  == domain 2  score: 15.4 bits;  conditional E-value: 3.3e-05
      AAA_29  23 gatlltGpsGsGKSTllDAiqalL 46 
                 + + ++Gp+G+GKSTl+  ++  L
  KHJ35083.1 707 SRIAVIGPNGAGKSTLINVLTGEL 730
                 46889************6665555 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.3   0.0    0.0033       1.1       3      25 ..     467     489 ..     465     536 .. 0.68
   2 !   19.0   0.0   3.4e-06    0.0012       1      32 [.     708     739 ..     708     764 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.0033
                 EEEESTTSSHHHHHHHHHTSTEE CS
    MMR_HSR1   3 aivGrpNvGKStLinaltgekai 25 
                 ++ G   +GKStL++a+ +e+++
  KHJ35083.1 467 GLCGPNGSGKSTLMRAINNEQVE 489
                 789999***********996432 PP

  == domain 2  score: 19.0 bits;  conditional E-value: 3.4e-06
                 EEEEEESTTSSHHHHHHHHHTSTEEESSSTTS CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltgekaivsdkpgt 32 
                 ++a++G   +GKStLin ltge   +s    t
  KHJ35083.1 708 RIAVIGPNGAGKSTLINVLTGELIPTSGDVYT 739
                 69*******************96666555444 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.0   0.0    0.0017      0.59      98     123 ..     461     487 ..     412     512 .. 0.82
   2 !   17.9   0.0   6.7e-06    0.0023      90     130 ..     696     737 ..     671     752 .. 0.79

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.0017
                  TT.SEEEEECSTTSSHHHHHHHHCTT- CS
  RsgA_GTPase  98 kd.ktsvlvGqSGvGKStLinallpel 123
                  k  +   l+G+ G GKStL+ a+++e+
   KHJ35083.1 461 KRgQRYGLCGPNGSGKSTLMRAINNEQ 487
                  4447888****************9984 PP

  == domain 2  score: 17.9 bits;  conditional E-value: 6.7e-06
                  HHHHHHHCTT.SEEEEECSTTSSHHHHHHHHCTT-----S-- CS
  RsgA_GTPase  90 leelkellkd.ktsvlvGqSGvGKStLinallpelelktgev 130
                  +++++ +++  + ++++G+ G+GKStLin+l++el    g+v
   KHJ35083.1 696 ISDINFQCSLgSRIAVIGPNGAGKSTLINVLTGELIPTSGDV 737
                  56666666654778899***************9976555555 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0   3.1e-05     0.011      10      51 ..     468     508 ..     461     609 .. 0.73
   2 !    9.2   0.0    0.0041       1.4       8      28 ..     709     729 ..     705     769 .. 0.87

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 3.1e-05
      AAA_22  10 vtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsst 51 
                 ++G+ G+GK+tl+r + ++ + e +++++++++vfv+   ++
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQV-EGFPKKNEVKTVFVEHDLDS 508
                 8*****************975.55666678888877654444 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.0041
      AAA_22   8 lvvtGesGtGKTtllrrlleq 28 
                 ++v+G+ G+GK+tl++ l+ +
  KHJ35083.1 709 IAVIGPNGAGKSTLINVLTGE 729
                 79************9987765 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.0       0.3     1e+02       3      23 ..     468     488 ..     467     504 .. 0.83
   2 !   22.9   0.0   2.2e-07   7.4e-05       1      76 [.     709     792 ..     709     935 .. 0.67

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.3
                 EEEBTTTTHHHHHHHHHTS-- CS
   Dynamin_N   3 vvGsqSsGKSSvlnaLlgedi 23 
                 ++G   sGKS+++ a+  e++
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQV 488
                 68999**********998887 PP

  == domain 2  score: 22.9 bits;  conditional E-value: 2.2e-07
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS---S-EEEEECCT---C........CS...SSEEEE.......T-EB--CHHHHHHHHHHH CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnptTrrplelqlgeeeeas........eravkeelkek.......ekkledfsevreeieket 76 
                 iav+G   +GKS+++n L+ge   p++  + T   + + + ++            + ++               ++ e +++ ++ +++e 
  KHJ35083.1 709 IAVIGPNGAGKSTLINVLTGEL-IPTSGDVYTHENIRIAYIKQHAFAhidhhlekTPSE------YiqwrfqtGEDRETMDRANKIVTDED 792
                 89******************99.699999***********7766633222222111111......11111123333333333333333332 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0    0.0014      0.47       4      51 ..     468     522 ..     465     539 .. 0.72
   2 !   15.2   0.0   5.7e-05      0.02       1      56 [.     708     771 ..     708     792 .. 0.63

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.0014
      AAA_28   4 itGgestGKTtlleaLaar...gypvvpEaareileeklakge...dalpwv.ed 51 
                 + G+ ++GK+tl++a++++   g+p   E+ + ++e+ l++      +++w+ ++
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEqveGFPKKNEVKTVFVEHDLDSADtelTTIDWTmKK 522
                 78***************87677888889999999988885444111444455444 PP

  == domain 2  score: 15.2 bits;  conditional E-value: 5.7e-05
      AAA_28   1 kivitGgestGKTtlleaLaar.....gypvvpEaar.eileeklakge.dalpwv.edllafa 56 
                 +i+++G+ ++GK+tl++ L+ +     g ++ +E  r  +++++++ +   +l+++  + ++ +
  KHJ35083.1 708 RIAVIGPNGAGKSTLINVLTGEliptsGDVYTHENIRiAYIKQHAFAHIdHHLEKTpSEYIQWR 771
                 79******************66455555444456555267777775544145555544444443 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.0   0.00061      0.21       3      39 ..     468     508 ..     467     526 .. 0.70
   2 !   10.1   0.0    0.0026      0.91       1      44 [.     709     750 ..     709     801 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00061
      AAA_18   3 ltGtpGvGKttlakeLskrl..gf..gvnlrdvakenglll 39 
                 l+G+ G+GK+tl ++++++   gf    +++ v+ e++l  
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQveGFpkKNEVKTVFVEHDLDS 508
                 8***************7774234476555555555555554 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.0026
      AAA_18   1 IlltGtpGvGKttlakeLskrlgfgvnlrdvakenglllevdpe 44 
                 I++ G+ G+GK+tl + L  +l     ++dv +++++++ + ++
  KHJ35083.1 709 IAVIGPNGAGKSTLINVLTGEL--IPTSGDVYTHENIRIAYIKQ 750
                 89****************7776..56666666666666555555 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.9   0.0    0.0026      0.91       3      34 ..     468     497 ..     467     508 .. 0.75
   2 !   10.7   0.0    0.0015      0.53       2      37 ..     710     740 ..     709     761 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0026
  RNA_helicase   3 lyGpsgeGKStlakeLakallkklklkkkdsv 34 
                   l+Gp+g GKStl++ + ++  + +  +kk++v
    KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQVEGF--PKKNEV 497
                   79*************887766555..444444 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.0015
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkklklkkkdsvysr 37 
                    + Gp+g GKStl++ L+ +l      +++++vy++
    KHJ35083.1 710 AVIGPNGAGKSTLINVLTGELI-----PTSGDVYTH 740
                   689*************988888.....666777773 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0       1.4   4.9e+02      81     119 ..     211     249 ..     200     254 .. 0.85
   2 !   10.4   0.0     0.002      0.68       3      23 ..     468     490 ..     466     582 .. 0.69
   3 ?    6.4   0.0     0.033        12       3      23 ..     711     736 ..     709     787 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHH CS
         AAA  81 eeervvnqLlteldgvkkkeskvivigatnrpdkldpal 119
                 + er +++L++ + + ++  ++v ++gat+ + ++ ++ 
  KHJ35083.1 211 DIERFIPELIKCIAKPENVPETVHLLGATTFVTDVHEPT 249
                 5678999**********************9977777665 PP

  == domain 2  score: 10.4 bits;  conditional E-value: 0.002
                 EESSTTSSHHHHHHHHHHHH..T CS
         AAA   3 lyGppGtGKTllakavakel..g 23 
                 l+Gp G GK++l++a+ +e   g
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQveG 490
                 89***************995331 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.033
                 EESSTTSSHHHHHHHHHHHH.....T CS
         AAA   3 lyGppGtGKTllakavakel.....g 23 
                 ++Gp G GK++l++ +  el     +
  KHJ35083.1 711 VIGPNGAGKSTLINVLTGELiptsgD 736
                 89*************99997555441 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0    0.0013      0.45       4      29 ..     468     492 ..     467     530 .. 0.70
   2 !    8.9   0.0    0.0044       1.5       3      25 ..     710     735 ..     709     793 .. 0.60

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.0013
      AAA_33   4 lvGlpGsGKstlaerllkklgavlls 29 
                 l+G++GsGKstl + +  +++++   
  KHJ35083.1 468 LCGPNGSGKSTLMRAIN-NEQVEGFP 492
                 7***********99864.44455555 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.0044
      AAA_33   3 llvGlpGsGKstlaerllkklg...a 25 
                  ++G++G+GKstl+  l  +l    +
  KHJ35083.1 710 AVIGPNGAGKSTLINVLTGELIptsG 735
                 589**********9998777655553 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.1   0.0    0.0093       3.2      29      49 ..     468     488 ..     451     554 .. 0.76
   2 !   10.1   0.0    0.0023      0.81      26      51 ..     708     733 ..     701     805 .. 0.68

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.0093
      AAA_16  29 lsGesGvGKsslvrellrale 49 
                 l G+ G+GKs+l+r++ ++  
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQV 488
                 67************9987444 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.0023
      AAA_16  26 lvllsGesGvGKsslvrellralekd 51 
                  + ++G+ G GKs+l++ l  +l  +
  KHJ35083.1 708 RIAVIGPNGAGKSTLINVLTGELIPT 733
                 578*************9999766655 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0    0.0093       3.2       5      30 ..      57      83 ..      54      84 .. 0.83
   2 ?    3.0   0.1      0.46   1.6e+02       1      29 [.      97     125 ..      97     127 .. 0.90
   3 ?    5.9   0.0     0.052        18       1      29 [.     177     205 ..     177     207 .. 0.93

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.0093
                HHHHH.T-SSHHHHHHHHHHHHHHHHC CS
        HEAT  5 llkll.sDpspeVReaAakaLgalaev 30
                + k l + ++++VRe A++a+ a+a +
  KHJ35083.1 57 FRKQLgNKKDANVRERALNAIQAIADH 83
                5666756799**************986 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.46
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 llPl l +  D+   VR aA +a+  +++
  KHJ35083.1  97 LLPLTLAAVGDKMVPVRNAAQLACYSIIK 125
                 789989999***************99987 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.052
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 l+P++ + + D+ peV ++A  ++ +++ 
  KHJ35083.1 177 LIPVVSESMWDTKPEVKKMAYSTMEKICA 205
                 79********************9999985 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.8   0.0     0.001      0.36      15      52 ..     449     486 ..     441     494 .. 0.89
   2 !    8.6   0.0    0.0024      0.84      19      54 ..     696     731 ..     675     737 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.001
                 HHHHHHHHGGG-S-SEEEEEEE-TTSSHHHHHHHHHHH CS
        MeaB  15 akellerllakaGraqvvGltGvPGaGkstlvealgle 52 
                 ak ll++   +  r q+ Gl G  G+Gkstl+ a+  e
  KHJ35083.1 449 AKILLNQTHLRLKRGQRYGLCGPNGSGKSTLMRAINNE 486
                 788999999999********************998765 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0024
                 HHHHGGG-S-SEEEEEEE-TTSSHHHHHHHHHHHHH CS
        MeaB  19 lerllakaGraqvvGltGvPGaGkstlvealglelr 54 
                 ++ +  ++    ++ + G  GaGkstl++ l+ el+
  KHJ35083.1 696 ISDINFQCSLGSRIAVIGPNGAGKSTLINVLTGELI 731
                 5666777888899******************99987 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   0.0   0.00016     0.057      28      68 ..     468     509 ..     455     544 .. 0.72
   2 ?   -1.8   0.0       5.5   1.9e+03     322     348 ..     572     598 ..     549     611 .. 0.79
   3 !    9.2   0.6    0.0026       0.9      25      44 ..     708     727 ..     697    1038 .. 0.70

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 0.00016
      AAA_15  28 liGkNnsGKSsilealdlFlnnkekkn......kkvikiekedleif 68 
                 l+G+N+sGKS++++a+    n++   +      + ++++ ++dl+  
  KHJ35083.1 468 LCGPNGSGKSTLMRAI---NNEQV--EgfpkknEVKTVFVEHDLDSA 509
                 8***************...33332..122444433344444444444 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 5.5
      AAA_15 322 eknvilliEEPEahLHpqaqkvlikll 348
                 e+++ill++EP +hL  ++ k l ++l
  KHJ35083.1 572 ENPDILLLDEPTNHLDVKNVKWLEDYL 598
                 6789**********9666666665555 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.0026
      AAA_15  25 ltvliGkNnsGKSsileald 44 
                    +iG+N++GKS+++++l 
  KHJ35083.1 708 RIAVIGPNGAGKSTLINVLT 727
                 5689*************993 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.3   0.0     0.005       1.7      22      41 ..     467     487 ..     456     591 .. 0.67
   2 !    7.8   0.0    0.0073       2.5      22      96 ..     710     791 ..     701     804 .. 0.67
   3 ?   -1.1   0.0       3.8   1.3e+03      81     120 ..     914     959 ..     856     971 .. 0.72

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.005
      AAA_30  22 vltGpAGtGKttalkal.rea 41 
                  l Gp G+GK+t+++a+ +e 
  KHJ35083.1 467 GLCGPNGSGKSTLMRAInNEQ 487
                 578*************94444 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0073
      AAA_30  22 vltGpAGtGKttalkal.reaweaag.....grviglAptgkaAkvLaeelg.ieastiakllkrlkgrarlepgtllivDE 96 
                 ++ Gp G+GK+t++++l  e++ ++g     +++ ++  ++ a + + ++l+ ++++ i+   ++ ++r+++++++ ++ DE
  KHJ35083.1 710 AVIGPNGAGKSTLINVLtGELIPTSGdvythENIRIAYIKQHAFAHIDHHLEkTPSEYIQWRFQTGEDRETMDRANKIVTDE 791
                 688*************966777777767775555555555555566666666335555555554444666666666666665 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 3.8
      AAA_30  81 k.....grarlepgtllivDEagmv.dtkqlaallkaaekagakvi 120
                 +     ++ ++++ +l++ DE     d ++l al ka+++ +  vi
  KHJ35083.1 914 RvkvvlAACSWQRPHLIVLDEPTNYlDRDSLGALSKAIKSFEGGVI 959
                 0555554466788899999996644399999999888887544444 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0      0.88   3.1e+02     132     191 ..     138     245 ..       6     269 .. 0.58
   2 !    8.6   0.0    0.0026       0.9      10      80 ..     450     518 ..     442     666 .. 0.76
   3 !    6.7   0.0    0.0099       3.4      25     107 ..     708     793 ..     694     876 .. 0.78

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.88
                 H..........................................HHHHHC.CSHHHHHHHCCG.CCTT...--TTHHHHHCT.HHHHCSTT----CHHHH CS
     G-alpha 132 e..........................................dikaLw.ndpgiqelyerr.nkik...lednaeyFldd.leritspdYlptddDil 182
                                                              +++w ++p ++++ ++  +ki    ++ ++e F+ + ++ i++p+ +p+  ++l
  KHJ35083.1 138 AvidsilkaqkwqekitgltliqnlvetapiqlalrvpdlipvVSESMWdTKPEVKKMAYSTmEKICaliVNKDIERFIPElIKCIAKPENVPETVHLL 236
                 033333333333333333444444444555555556666666677889966888888855443555543367999999998789999999999999998 PP

                 CS-----SE CS
     G-alpha 183 karlktvGi 191
                  a +  + +
  KHJ35083.1 237 GATTFVTDV 245
                 886555555 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0026
                 XXXXXXXXXXE..EEEEEEEESTTSSHHHHHHHHHHHCS----HHHHHCCHHHHHHHHHHHHHHHHHHHHH CS
     G-alpha  10 slkaerkarkkkrevkllllGqseSGKsTilkqlkllykkgfseeelatwraviqlnivrsiktileales 80 
                 ++  +++  + kr  +  l+G ++SGKsT+++ +     +gf ++  ++ + v  ++ ++s++t l +++ 
  KHJ35083.1 450 KILLNQTHLRLKRGQRYGLCGPNGSGKSTLMRAINNEQVEGFPKK--NEVKTVFVEHDLDSADTELTTIDW 518
                 556666666667788889****************98888888877..667778777777777776666665 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0099
                 EEEEEESTTSSHHHHHHHHH..HHCS--..--HHHHHCCHHHHHHHHHHHHHHHHHHHHHTT..........HHHC-SS-SCCCS-HCHH CS
     G-alpha  25 kllllGqseSGKsTilkqlk..llykkg..fseeelatwraviqlnivrsiktilealesleselsesf...elqelkerldplkkveas 107
                 ++ ++G ++ GKsT+++ l   l+ + g  +++e++++  a+i ++   +i++ le+  s+ ++   +f   e++e  +r++++ + e++
  KHJ35083.1 708 RIAVIGPNGAGKSTLINVLTgeLIPTSGdvYTHENIRI--AYIKQHAFAHIDHHLEKTPSEYIQW--RFqtgEDRETMDRANKIVTDEDE 793
                 7999***************9877776668888885555..89**************999987777..45225555555555555544443 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0     0.001      0.35      31      68 ..     468     506 ..     446     511 .. 0.78
   2 ?    6.4   0.0     0.017         6      31      46 ..     711     726 ..     697     746 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.001
      AAA_27  31 iyGpNEAGKstalrAisd.llfGipertkdnflhdakkL 68 
                 + GpN +GKst++rAi++  + G+p++ + + ++ +++L
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNeQVEGFPKKNEVKTVFVEHDL 506
                 47**************75266788888887777766665 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.017
      AAA_27  31 iyGpNEAGKstalrAi 46 
                 ++GpN AGKst+++ +
  KHJ35083.1 711 VIGPNGAGKSTLINVL 726
                 89*********98765 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   0.0     0.027       9.3       6      27 ..     468     489 ..     464     508 .. 0.88
   2 !    9.7   0.0    0.0019      0.65       3      51 ..     708     771 ..     706     828 .. 0.78

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.027
   PduV-EutP   6 liGkvgsGKttLtqalkgeelk 27 
                 l G+ gsGK tL++a+++e+++
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQVE 489
                 789***************9975 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.0019
   PduV-EutP   3 killiGkvgsGKttLtqalkg..............eelkYkktqaiefsdeviD.tPGeylenr 51 
                 +i +iG+ g+GK tL + l+g               ++ Y k  a  + d+ ++ tP ey++ r
  KHJ35083.1 708 RIAVIGPNGAGKSTLINVLTGeliptsgdvythenIRIAYIKQHAFAHIDHHLEkTPSEYIQWR 771
                 899******************9999999999987667889999999888888644999999887 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00074      0.25       5      39 ..     468     502 ..     465     523 .. 0.91
   2 ?    5.2   0.0     0.051        18       2      20 ..     708     726 ..     707     732 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00074
                 EEC-TTTCHHHHHHHHHHHHCTS-SCCCC-SEEEE CS
       NACHT   5 lqGeaGsGKTtLlqklalawaegklpqgafklvFf 39 
                 l G++GsGK+tL++ +  +  eg ++++++k vF+
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQVEGFPKKNEVKTVFV 502
                 569******************99999999999997 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.051
                 CEEEEC-TTTCHHHHHHHH CS
       NACHT   2 lvilqGeaGsGKTtLlqkl 20 
                  +++ G++G GK+tL+  l
  KHJ35083.1 708 RIAVIGPNGAGKSTLINVL 726
                 5899***********8765 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0       2.2   7.7e+02     101     151 ..     117     167 ..     114     225 .. 0.72
   2 ?    6.0   0.0     0.033        11      28      51 ..     468     495 ..     462     502 .. 0.77
   3 !    9.6   0.0    0.0026      0.91      23      48 ..     706     731 ..     698     739 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 2.2
       DUF87 101 elldlleeddkpaaavqrsvleealdqaka.keekeklssdepveklleelk 151
                 +l++ +++ +  +a++ +s+l  ++d++ + ++++ek+++ +++++l e   
  KHJ35083.1 117 QLACYSII-KAINANAIKSALPAVIDSILKaQKWQEKITGLTLIQNLVETAP 167
                 56777777.6667777888888888888777999999999999999888765 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.033
       DUF87  28 ilgsTGsGKSntvavLleelle....kk 51 
                   g  GsGKS++++ + +e +e    k+
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQVEgfpkKN 495
                 56677*************9998876444 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.0026
       DUF87  23 trHlAilgsTGsGKSntvavLleell 48 
                   ++A++g  G+GKS+++ vL  el+
  KHJ35083.1 706 GSRIAVIGPNGAGKSTLINVLTGELI 731
                 5689******************9998 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.014       4.8       2      22 ..     463     483 ..     462     520 .. 0.82
   2 !    8.6   0.0    0.0041       1.4       3      22 ..     707     726 ..     705     796 .. 0.88

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.014
      AAA_24   2 klkiliyGpsgiGKTtlakel 22 
                 ++++ + Gp+g+GK+tl++ +
  KHJ35083.1 463 GQRYGLCGPNGSGKSTLMRAI 483
                 678999************988 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0041
      AAA_24   3 lkiliyGpsgiGKTtlakel 22 
                  +i+++Gp+g+GK+tl++ l
  KHJ35083.1 707 SRIAVIGPNGAGKSTLINVL 726
                 589*************9866 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.0     0.011       3.7       7      47 ..     468     510 ..     463     532 .. 0.68
   2 ?    6.5   0.0     0.023       8.1       5      37 ..     709     749 ..     706     812 .. 0.70
   3 ?   -1.8   0.0       8.6     3e+03      63     102 ..     925     966 ..     904     982 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.011
      AAA_14   7 itGaRrvGKTtllkqlikell..vkkesilyinldderdkkla 47 
                 + G+  +GK+tl++ + +e+    +k++ +   + ++++++++
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQVegFPKKNEVKTVFVEHDLDSAD 510
                 789************9999999955555555555554443322 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.023
      AAA_14   5 lvitGaRrvGKTtllkqlikell........vkkesilyin 37 
                 +++ G+  +GK+tl++ l  el+         ++ +i yi+
  KHJ35083.1 709 IAVIGPNGAGKSTLINVLTGELIptsgdvytHENIRIAYIK 749
                 6799************9999999877776333333333333 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 8.6
      AAA_14  63 ekktylflDEiqev..pewekalkslvdegknldvivtGSns 102
                 ++ ++++lDE  ++  ++   al + +++ + + +i+t S+ 
  KHJ35083.1 925 QRPHLIVLDEPTNYldRDSLGALSKAIKSFEGGVIIITHSAE 966
                 467899999999986555666777777777777777777765 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.4   0.1    0.0083       2.9      30      65 ..      51      87 ..      13     149 .. 0.75
   2 ?    5.0   0.0     0.094        32      28      74 ..     173     226 ..     157     232 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0083
      HEAT_2 30 pealpaLvell.ededpavRraaaeaLgaigdpealp 65
                +++++a+++ l + +d++vR+ a +a+ ai+d+ + +
  KHJ35083.1 51 TRTVDAFRKQLgNKKDANVRERALNAIQAIADHGDTS 87
                3777788887755577788888888887777655433 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.094
      HEAT_2  28 gnpealpaLvellededpavRraaaeaLgai......gd.pealpaLkellddd 74 
                 + p+++p + e + d++p+v ++a  ++ +i      +d ++++p L ++ + +
  KHJ35083.1 173 RVPDLIPVVSESMWDTKPEVKKMAYSTMEKIcalivnKDiERFIPELIKCIAKP 226
                 568999***********************9955555545799999999988776 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.9   0.0    0.0075       2.6      25      45 ..     468     489 ..     456     557 .. 0.72
   2 ?    4.9   0.0     0.062        21      24      47 ..     710     733 ..     696     809 .. 0.65

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.0075
    ATPase_2  25 iYGpegsGKtaLlkeiienl.e 45 
                 + Gp gsGK++L++ i +++ e
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQvE 489
                 56************98777633 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.062
    ATPase_2  24 fiYGpegsGKtaLlkeiienledk 47 
                  + Gp g GK++L++ +  +l   
  KHJ35083.1 710 AVIGPNGAGKSTLINVLTGELIPT 733
                 577************988777443 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0         7   2.4e+03      25      47 ..     268     290 ..     256     306 .. 0.82
   2 ?    7.1   0.0     0.011       3.7       4      23 ..     467     486 ..     464     526 .. 0.80
   3 ?    5.7   0.0      0.03        10       4      21 ..     710     727 ..     707     766 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 7
                 -SS-EEEEESS-SSCHCCCCCCH CS
        cobW  25 aglklavivNefgevsiDaellr 47 
                  ++k aviv ++ ++ +D ++++
  KHJ35083.1 268 IKRKSAVIVDNMCKLVEDPQIVA 290
                 57899********9999999986 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.011
                 EEEESTTCCHHHHHHHHHCT CS
        cobW   4 vltGflGsGKTtLlnhllen 23 
                 +l+G+ GsGK+tL++++ ++
  KHJ35083.1 467 GLCGPNGSGKSTLMRAINNE 486
                 799***********998733 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.03
                 EEEESTTCCHHHHHHHHH CS
        cobW   4 vltGflGsGKTtLlnhll 21 
                  + G+ G+GK+tL+n l+
  KHJ35083.1 710 AVIGPNGAGKSTLINVLT 727
                 6889**********9886 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0     0.018       6.2      47      72 ..     465     490 ..     449     521 .. 0.75
   2 ?    7.3   0.0     0.012         4      50      73 ..     711     734 ..     702     762 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.018
       Rad17  47 iLLisGPsGCgkstvvkvLskelgik 72 
                    ++GP G gkst ++ +  e +  
  KHJ35083.1 465 RYGLCGPNGSGKSTLMRAINNEQVEG 490
                 5569*************999888765 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.012
       Rad17  50 isGPsGCgkstvvkvLskelgikl 73 
                 + GP G gkst ++vL+ el +  
  KHJ35083.1 711 VIGPNGAGKSTLINVLTGELIPTS 734
                 67***************9998765 PP

>> PRK  Phosphoribulokinase / Uridine kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.2   0.0   0.00064      0.22       3      68 ..     467     533 ..     466     541 .. 0.82
   2 ?    2.2   0.0      0.37   1.3e+02       2      23 ..     709     730 ..     708     788 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00064
         PRK   3 gvagsSGaGkttvarklek.ifgrekvkaaeiegdsflrldraekdleleerkrakekevsflspea 68 
                 g++g+ G+Gk+t++r++++  +++  +k  + +  +++ ld+a+ +l++ +   +k +ev    p+a
  KHJ35083.1 467 GLCGPNGSGKSTLMRAINNeQVEGFPKKNEVKTVFVEHDLDSADTELTTIDWTMKKLAEVGISTPQA 533
                 89***************862566666776677999999*****999999998888888887777766 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.37
         PRK   2 IgvagsSGaGkttvarklekif 23 
                 I+v g+ GaGk+t+ + l+  +
  KHJ35083.1 709 IAVIGPNGAGKSTLINVLTGEL 730
                 99***********998887554 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.7   0.0    0.0013      0.45      24      48 ..     467     489 ..     455     510 .. 0.86
   2 ?    2.5   0.0       0.2        69      22      38 ..     708     724 ..     696     739 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.0013
                 EEEESTTSSHHHHHHHHCCSHCCCC CS
      NB-ARC  24 alvGmgGvGKttlakqilnksdeve 48 
                 +l G  G+GK+tl++ i+n+  +ve
  KHJ35083.1 467 GLCGPNGSGKSTLMRAINNE--QVE 489
                 689****************9..554 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.2
                 EEEEEESTTSSHHHHHH CS
      NB-ARC  22 vvalvGmgGvGKttlak 38 
                  +a+ G  G GK+tl++
  KHJ35083.1 708 RIAVIGPNGAGKSTLIN 724
                 5899***********86 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.022       7.6       2      17 ..     469     484 ..     468     501 .. 0.89
   2 ?    6.0   0.1     0.025       8.7       1      17 [.     711     727 ..     711     739 .. 0.85

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.022
  ATP_bind_1   2 vGpaGsGKttfvgals 17 
                 +Gp GsGK+t+++a++
  KHJ35083.1 469 CGPNGSGKSTLMRAIN 484
                 7***********9986 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.025
  ATP_bind_1   1 vvGpaGsGKttfvgals 17 
                 v+Gp G+GK+t+++ l+
  KHJ35083.1 711 VIGPNGAGKSTLINVLT 727
                 89**********99875 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0     0.016       5.5      46      73 ..     462     489 ..     452     512 .. 0.84
   2 ?    4.7   0.0     0.066        23      49      74 ..     708     733 ..     696     770 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.016
   IstB_IS21  46 kkenivllGpsGvGKshlaialgveavr 73 
                 + +   l+Gp G GKs l  a+  e v+
  KHJ35083.1 462 RGQRYGLCGPNGSGKSTLMRAINNEQVE 489
                 5667779***************999886 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.066
   IstB_IS21  49 nivllGpsGvGKshlaialgveavra 74 
                  i+++Gp G+GKs l   l  e + +
  KHJ35083.1 708 RIAVIGPNGAGKSTLINVLTGELIPT 733
                 589***********998888777755 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0     0.046        16       4      27 ..     468     491 ..     465     524 .. 0.71
   2 ?    6.4   0.0      0.03        10       1      22 [.     708     729 ..     708     769 .. 0.83

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.046
                 EESSTTSSHHHHHHCHCT-CCC-E CS
         Roc   4 lvGdsgvGKtsllkrfvedkfsek 27 
                 l+G +g+GK++l++ + +++++  
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQVEGF 491
                 79*************999998643 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.03
                 EEEEESSTTSSHHHHHHCHCT- CS
         Roc   1 KvvlvGdsgvGKtsllkrfved 22 
                 ++ ++G +g+GK++l++ ++ +
  KHJ35083.1 708 RIAVIGPNGAGKSTLINVLTGE 729
                 5899************988754 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.0     0.013       4.6      29      57 ..     459     487 ..     452     525 .. 0.76
   2 ?    5.0   0.0     0.045        15      33      57 ..     706     730 ..     699     763 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.013
       AAA_7  29 llknkkpvllvGptGtGKtviikdllkkl 57 
                  lk+++   l+Gp G+GK+++++ + ++ 
  KHJ35083.1 459 RLKRGQRYGLCGPNGSGKSTLMRAINNEQ 487
                 5678888899***********99866543 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.045
       AAA_7  33 kkpvllvGptGtGKtviikdllkkl 57 
                 +  + ++Gp G GK+++i+ l+ +l
  KHJ35083.1 706 GSRIAVIGPNGAGKSTLINVLTGEL 730
                 567889************9877665 PP

>> SbcCD_C  Putative exonuclease SbcCD, C subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0       0.2        70      62      82 ..     572     592 ..     539     599 .. 0.78
   2 ?    7.1   0.0     0.019       6.5      32      89 ..     908     952 ..     893     953 .. 0.73

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.2
     SbcCD_C  62 palrlvfLDEAFsklDeesia 82 
                 +++++++LDE  + lD ++++
  KHJ35083.1 572 ENPDILLLDEPTNHLDVKNVK 592
                 4689************99986 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.019
     SbcCD_C  32 tlSGGekqflaylalaaalaalyssaegrepalrlvfLDEAFsklDeesiatllelle 89 
                 +lSGG++   + ++la    a  +      +++ l++LDE  + lD +s+ +l ++++
  KHJ35083.1 908 GLSGGQR---VKVVLA----ACSW------QRPHLIVLDEPTNYLDRDSLGALSKAIK 952
                 5666666...444444....2333......4789***************999988765 PP

>> CLP1_P  mRNA cleavage and polyadenylation factor CLP1 P-loop
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.0    0.0024      0.84       1      32 [.     470     506 ..     470     515 .. 0.81
   2 ?    2.7   0.0      0.28        95       1      19 [.     713     731 ..     713     738 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0024
      CLP1_P   1 GpkdsGKSTlarlLlNyal.....rkgrkpvyvDlDv 32 
                 Gp+ sGKSTl+r + N+ +     +++ k+v+v+ D+
  KHJ35083.1 470 GPNGSGKSTLMRAINNEQVegfpkKNEVKTVFVEHDL 506
                 899***************9666644556888998886 PP

  == domain 2  score: 2.7 bits;  conditional E-value: 0.28
      CLP1_P   1 GpkdsGKSTlarlLlNyal 19 
                 Gp+ +GKSTl+ +L  +++
  KHJ35083.1 713 GPNGAGKSTLINVLTGELI 731
                 899***********99886 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       5.6   1.9e+03     143     171 ..     176     204 ..     169     219 .. 0.77
   2 ?    3.4   0.0      0.12        40       9      32 ..     468     491 ..     466     522 .. 0.75
   3 ?    6.7   0.0     0.011       3.8       7      30 ..     709     732 ..     705     763 .. 0.76

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 5.6
                 -EEEEESSGGGS-HHHHHHHHHHHHHHHH CS
      Septin 143 nliPviaKaDtltkeElkefKkkireele 171
                  liPv++ +   tk E+k++    +e++ 
  KHJ35083.1 176 DLIPVVSESMWDTKPEVKKMAYSTMEKIC 204
                 69*******999*****998776666654 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.12
                 EEEBTTSSCCCCCCTTSSSS---- CS
      Septin   9 vvGesglGkttlintlfetdliee 32 
                 ++G +g Gk+tl++++ ++++   
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQVEGF 491
                 69************9998887655 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.011
                 EEEEEBTTSSCCCCCCTTSSSS-- CS
      Septin   7 lmvvGesglGkttlintlfetdli 30 
                 + v+G +g Gk+tlin l  + + 
  KHJ35083.1 709 IAVIGPNGAGKSTLINVLTGELIP 732
                 679*************99866544 PP

>> Cytidylate_kin  Cytidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8   0.0      0.06        21       4      20 ..     469     485 ..     467     490 .. 0.87
   2 ?    6.0   0.0     0.025       8.7       1      22 [.     709     730 ..     709     805 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.06
                     E-STTSSHHHHHHHHHH CS
  Cytidylate_kin   4 DGPagsGKssvaralae 20 
                      GP gsGKs++ ra+ +
      KHJ35083.1 469 CGPNGSGKSTLMRAINN 485
                     59***********9876 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.025
                     EEEE-STTSSHHHHHHHHHHHH CS
  Cytidylate_kin   1 iaiDGPagsGKssvaralaekl 22 
                     ia+ GP g+GKs++   l+ +l
      KHJ35083.1 709 IAVIGPNGAGKSTLINVLTGEL 730
                     8999**********99998776 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.25        87      27      43 ..     468     484 ..     463     500 .. 0.90
   2 ?    6.5   0.0     0.014       4.9      25      65 ..     709     750 ..     703     766 .. 0.73
   3 ?   -1.5   0.0       3.9   1.3e+03      44     132 ..     863     953 ..     855     973 .. 0.64

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.25
  Mg_chelatase  27 lvGppGsGKtmlakrlp 43 
                   l+Gp GsGK+ l ++++
    KHJ35083.1 468 LCGPNGSGKSTLMRAIN 484
                   79**********99876 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.014
  Mg_chelatase  25 lllvGppGsGKtmlakrlps.llpplseeealevakiasvag 65 
                   + ++Gp G+GK+ l++ l++ l+p   +  ++e  +ia +++
    KHJ35083.1 709 IAVIGPNGAGKSTLINVLTGeLIPTSGDVYTHENIRIAYIKQ 750
                   6789*************9973666666666666666665554 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 3.9
  Mg_chelatase  44 sllpplseeealevakiasvagkkeeekllkrrpfraphhsas.kaalvGggs.kpkpGeislahnGvLfLDElpef.krkvlevLRePled 132
                   +++++++++eal + + + +++k+ e++  +   + a   s s +++l Gg++ k+   + s  +  +++LDE +++ +r+ l +L + + +
    KHJ35083.1 863 KMVAEVDQKEALASGQFRPLVRKEIESHCAN-FGLDAELVSHSrMVGLSGGQRvKVVLAACSWQRPHLIVLDEPTNYlDRDSLGALSKAIKS 953
                   6677788888888888888777554444433.333333333331567777776677788889889999999998775367788888776654 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.073        25       3      22 ..     467     486 ..     465     532 .. 0.90
   2 ?    5.5   0.0     0.042        15       1      23 [.     708     730 ..     708     744 .. 0.83

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.073
                 EEE--TTSSHHHHHHHHHHH CS
    NTPase_1   3 fiTGppGvGKtTlvkkvlel 22 
                  + Gp G+GK+Tl++ + ++
  KHJ35083.1 467 GLCGPNGSGKSTLMRAINNE 486
                 689**********9988665 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.042
                 EEEEE--TTSSHHHHHHHHHHHH CS
    NTPase_1   1 kvfiTGppGvGKtTlvkkvlell 23 
                 ++++ Gp G GK+Tl++ ++ +l
  KHJ35083.1 708 RIAVIGPNGAGKSTLINVLTGEL 730
                 58899***********9887776 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0      0.11        38     135     152 ..     469     486 ..     458     520 .. 0.77
   2 ?    6.2   0.0     0.014       4.8     131     164 ..     708     741 ..     679     766 .. 0.83

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.11
       T2SSE 135 sGgTgsGKttllyallke 152
                  G+ gsGK+tl+ a+ +e
  KHJ35083.1 469 CGPNGSGKSTLMRAINNE 486
                 7**********9777554 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.014
       T2SSE 131 lilvsGgTgsGKttllyallkeinksderivtvE 164
                  i v G+ g GK+tl+++l  e+  ++  + t E
  KHJ35083.1 708 RIAVIGPNGAGKSTLINVLTGELIPTSGDVYTHE 741
                 57899**************999877767777766 PP

>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0      0.04        14      12      38 ..     461     487 ..     456     504 .. 0.87
   2 ?    5.0   0.0      0.05        17       6      35 ..     698     727 ..     695     794 .. 0.93

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.04
                  BTT-EEEEEESTTSSHHHHHHHHHHHS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  12 vqGqrtlipgafgvGktvisqslskqs 38 
                   +Gqr ++ g +g Gk+++++++ +++
   KHJ35083.1 461 KRGQRYGLCGPNGSGKSTLMRAINNEQ 487
                  69******************9998874 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.05
                  HHHS-EBTT-EEEEEESTTSSHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab   6 DalfpivqGqrtlipgafgvGktvisqsls 35 
                  D  f +  G r++++g +g Gk+++++ l+
   KHJ35083.1 698 DINFQCSLGSRIAVIGPNGAGKSTLINVLT 727
                  778999******************998765 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.1   0.0      0.07        24      20      39 ..     467     486 ..     451     498 .. 0.83
   2 ?    4.8   0.0     0.042        15      22      42 ..     712     732 ..     707     740 .. 0.81

  Alignments for each domain:
  == domain 1  score: 4.1 bits;  conditional E-value: 0.07
  Zeta_toxin  20 llgGqpGAGKselaellkde 39 
                  l G  G+GKs+l++++++e
  KHJ35083.1 467 GLCGPNGSGKSTLMRAINNE 486
                 578999**********9988 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.042
  Zeta_toxin  22 gGqpGAGKselaellkdeler 42 
                  G  GAGKs+l++ l+ el +
  KHJ35083.1 712 IGPNGAGKSTLINVLTGELIP 732
                 5889***********999874 PP

>> Ploopntkinase3  P-loop Nucleotide Kinase3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.0   0.0      0.06        21       8      51 ..     468     512 ..     465     530 .. 0.68
   2 ?    4.5   0.0     0.084        29       6      26 ..     709     729 ..     706     746 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.0 bits;  conditional E-value: 0.06
  Ploopntkinase3   8 lvGqPGaGkstlmaeltkgfdrskveqee.etvphdvlvdrttGe 51 
                     l G  G+Gkstlm ++ +  +    +++e +tv  ++ +d ++ e
      KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQVEGFPKKNEvKTVFVEHDLDSADTE 512
                     67889********99987655443333333566555555555555 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.084
  Ploopntkinase3   6 iylvGqPGaGkstlmaeltkg 26 
                     i ++G  GaGkstl+  lt  
      KHJ35083.1 709 IAVIGPNGAGKSTLINVLTGE 729
                     6789************99965 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   0.0     0.032        11      58      77 ..     468     487 ..     449     507 .. 0.83
   2 ?    3.2   0.0      0.12        41      56      92 ..     709     753 ..     702     770 .. 0.67

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.032
      DUF815  58 LwGarGtGKSslvkallney 77 
                 L G  G+GKS+l++a+ ne 
  KHJ35083.1 468 LCGPNGSGKSTLMRAINNEQ 487
                 89**************9986 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.12
      DUF815  56 vLLwGarGtGKSslvkallneyaeeg........Lrlievekedl 92 
                 + ++G  G+GKS+l+  l+ e+  ++        +r+  ++++  
  KHJ35083.1 709 IAVIGPNGAGKSTLINVLTGELIPTSgdvythenIRIAYIKQHAF 753
                 567899**********99988766554555544455555555544 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0       1.5   5.1e+02       4      24 ..     467     487 ..     464     511 .. 0.82
   2 ?    8.6   0.1    0.0035       1.2       2      23 ..     708     729 ..     707     734 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 1.5
                 EEEESTTSSHHHHHHHHHTTS CS
      FeoB_N   4 alvGnpnvGkttlfnaltgak 24 
                  l+G   +Gk+tl+ a+ + +
  KHJ35083.1 467 GLCGPNGSGKSTLMRAINNEQ 487
                 5789999********997654 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0035
                 EEEEEESTTSSHHHHHHHHHTT CS
      FeoB_N   2 tvalvGnpnvGkttlfnaltga 23 
                 ++a++G   +Gk+tl+n ltg 
  KHJ35083.1 708 RIAVIGPNGAGKSTLINVLTGE 729
                 699*****************95 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0      0.11        38      30      55 .]      54      80 ..      46      80 .. 0.83
   2 ?    3.5   0.1       0.3     1e+02       2      48 ..      68     116 ..      67     123 .. 0.75
   3 ?    2.3   0.0      0.72   2.5e+02      17      34 ..     284     301 ..     282     319 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.11
     HEAT_EZ 30 lpaLlalLnddsd.eVRaaAagaLgnl 55
                ++a+ + L +++d +VR+ A+ a+ ++
  KHJ35083.1 54 VDAFRKQLGNKKDaNVRERALNAIQAI 80
                78999999887777*********9875 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.3
     HEAT_EZ   2 rvRraAawaLGrlaggepel..lqplvpeilpaLlalLnddsdeVRaaA 48 
                 +vR+ A++a+ ++a +++    ++p++  +lp+ la+  d+  +VR aA
  KHJ35083.1  68 NVRERALNAIQAIADHGDTSpiIEPYLVTLLPLTLAAVGDKMVPVRNAA 116
                 79********778888777788888888888888877744433556665 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.72
     HEAT_EZ  17 gepellqplvpeilpaLl 34 
                 + p+ ++ ++p+++paL 
  KHJ35083.1 284 EDPQIVASFLPKLMPALT 301
                 67899999********98 PP

>> MukB  MukB N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.075        26      79     119 ..     459     499 ..     454     541 .. 0.69
   2 ?    4.5   0.0     0.076        26      31      53 ..     711     733 ..     706     742 .. 0.87

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.075
                 GB-SSEEEEEEEEE-TTS-EEEEEEEEEE-SSTTT-EEEEE CS
        MukB  79 klkaGvcysvlevvnsreqrllvgvrleqvagrdkkvdikp 119
                 +lk+G+ y +     s +  l+ +++ eqv g  kk ++k+
  KHJ35083.1 459 RLKRGQRYGLCGPNGSGKSTLMRAINNEQVEGFPKKNEVKT 499
                 66666666666666666666777777777777666666655 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.076
                 HHS--SHHHHHHHHHHHHHHS-- CS
        MukB  31 lsGgnGaGksttmaafvtaliPd 53 
                 + G nGaGkst +  +   liP 
  KHJ35083.1 711 VIGPNGAGKSTLINVLTGELIPT 733
                 6799*********9999999996 PP

>> AAA_13  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   1.6       5.3   1.8e+03     349     412 ..      14      78 ..       3      87 .. 0.51
   2 ?    6.4   0.0    0.0086         3      23      46 ..     470     493 ..     463     521 .. 0.79
   3 ?    3.1   0.0     0.082        28      22      38 ..     712     728 ..     703     795 .. 0.86
   4 ?    1.6   0.0      0.24        81     528     580 ..     928     974 ..     920     990 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 5.3
      AAA_13 349 kepfksvelesvkakiesikklva.eineliakhNekvanleeekeeakkklelhlveeleseld 412
                 +e+++++++++ +a+i+s+++++a  in  i++h + +  +++ ++++ +k  + + e++ ++++
  KHJ35083.1  14 DELMAKLNISKEQADINSATHNLAvFINSPIEEHDAPTRTVDAFRKQLGNKKDANVRERALNAIQ 78 
                 45555555555555554444433314555566666555555555555555544444444444444 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0086
      AAA_13  23 GwNGaGKTtLSrllrslelgetep 46 
                 G NG+GK+tL r++++ + +   +
  KHJ35083.1 470 GPNGSGKSTLMRAINNEQVEGFPK 493
                 99************9966554443 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.082
      AAA_13  22 YGwNGaGKTtLSrllrs 38 
                  G NGaGK+tL ++l  
  KHJ35083.1 712 IGPNGAGKSTLINVLTG 728
                 49*********999875 PP

  == domain 4  score: 1.6 bits;  conditional E-value: 0.24
      AAA_13 528 kivviDDPvSSLDsnslfivfsliksrllkkkkakQlfiLTHnleffkevkkn 580
                   +v+D P   LD +sl   +  iks          ++i TH+ ef k ++++
  KHJ35083.1 928 HLIVLDEPTNYLDRDSLGALSKAIKSFE------GGVIIITHSAEFTKDLTEE 974
                 6799999999999999999999999886......78************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1054 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1004  (0.0559987); expected 358.6 (0.02)
Passed bias filter:                      708  (0.0394891); expected 358.6 (0.02)
Passed Vit filter:                       116  (0.00646996); expected 17.9 (0.001)
Passed Fwd filter:                        52  (0.00290033); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              52  [number of targets reported over threshold]
# CPU time: 1.00u 0.30s 00:00:01.30 Elapsed: 00:00:00.44
# Mc/sec: 7203.60
//
Query:       KHJ35084.1  [L=1813]
Description: putative guanyl-nucleotide exchange factor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-69  233.4   1.5    1.5e-69  233.4   1.5    2.5  3  Sec7      Sec7 domain
      2e-40  138.3   2.7      2e-40  138.3   2.7    2.8  2  Sec7_N    Guanine nucleotide exchange factor in Golgi transpo
    6.2e-34  115.7   7.5    2.7e-31  107.3   0.1    5.4  5  DUF1981   Domain of unknown function (DUF1981)
    1.3e-20   73.9   9.6    4.7e-20   72.0   1.7    3.7  4  DCB       Dimerisation and cyclophilin-binding domain of Mon2
  ------ inclusion threshold ------
        0.1   13.1   1.8        0.4   11.1   0.1    2.8  2  SPAN-X    Sperm protein associated with nucleus, mapped to X 


Domain annotation for each model (and alignments):
>> Sec7  Sec7 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  233.4   1.5   4.1e-73   1.5e-69       4     183 .]     633     813 ..     630     813 .. 0.97
   2 ?   -2.0   0.0      0.68   2.4e+03      34      85 ..    1246    1301 ..    1231    1312 .. 0.70
   3 ?   -3.0   0.1       1.4   4.8e+03      80     116 ..    1428    1466 ..    1424    1515 .. 0.61

  Alignments for each domain:
  == domain 1  score: 233.4 bits;  conditional E-value: 4.1e-73
                 HHHHHHHHHHH-HHHHHHHHHHCCCC.TSSHHHHHHHHHHTCCS-HHHHHHHHCSGGHHHHHHHHHHHCTS--TT--HHHHHHHHCCCS-B-SSHHHHH CS
        Sec7   4 lleeaaekFnkkpkkgikyliekgll.eedpksiakflketpgldkkklGeylgkekefnkevlkefvdlfdfsglrldeAlRlflssfrlpgEaqkie 101
                    +a+++Fn kpk+gi+ l  ++++ +++p++ia+fl ++++ldk+++Geylg+ +e n+ ++++fvd++df++ r+++AlR+fl+sfrlpgEaqki+
  KHJ35084.1 633 AKYNAIRQFNYKPKRGIELLLAEKFIpQNSPEDIAHFLLTEDRLDKAQIGEYLGEGDEQNIAIMHAFVDSMDFTKRRFVDALRQFLQSFRLPGEAQKID 731
                 556899********************5566********************************************************************* PP

                 HHHHHHHHHHHHTTCTCG-SHHHHHHHHHHHHHHHHHHC-TTSCCS--HHHHHHCTTTTBTTB---HHHHHHHHHHHHHS-- CS
        Sec7 102 rilekFaekyfeqnpevfenadavfvLaysiimLntdlhnpqvkkkmtledFiknnrgindgkdlpeefLeeiYdsIkeeei 183
                 r++ kFa++y++ np++f+nad+++vLays+i+Lntdlh+++v k+mt+ dFiknnrgind+ +lp+e+L++iYd+I+++ei
  KHJ35084.1 732 RFMLKFANRYVTGNPNAFANADTAYVLAYSVILLNTDLHSSKVAKRMTKLDFIKNNRGINDNANLPDEYLNSIYDEIANDEI 813
                 *************************************************************99****************998 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.68
                  HHHHHHHHHT.CCS-HHHHHHHHCSGGHHHH.HHHHHHHCTS--..TT--HHHHHH CS
        Sec7   34 ksiakflket.pgldkkklGeylgkekefnk.evlkefvdlfdf..sglrldeAlR 85  
                  +si+++ +e+ +++ k+  G  +++    +   +l ef +  +f  +gl+ +e l+
  KHJ35084.1 1246 ESIVSLAFENvNQIYKTHFGLVISQGAFADLiVCLTEFSKNTRFqkKGLQAMETLK 1301
                  67777777777889999999999988833322578999998888333445555555 PP

  == domain 3  score: -3.0 bits;  conditional E-value: 1.4
                  HHHHHHHHCCCS-B-SSHHH..HHHHHHHHHHHHHHTTC CS
        Sec7   80 ldeAlRlflssfrlpgEaqk..ierilekFaekyfeqnp 116 
                  + +AlR +++ f+   E+ +  ++r+l+ +a + +++n 
  KHJ35084.1 1428 MIQALRNMITLFTHYFESLEymLDRFLDLLALCITQEND 1466
                  667888888888777666432266777766766666664 PP

>> Sec7_N  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.3   2.7   5.6e-44     2e-40       1     156 [.     305     475 ..     305     477 .. 0.94
   2 ?    1.1   0.4     0.094   3.4e+02      27     103 ..    1416    1490 ..    1395    1534 .. 0.63

  Alignments for each domain:
  == domain 1  score: 138.3 bits;  conditional E-value: 5.6e-44
      Sec7_N   1 aakDaflvfrdLcklinsaks....k.pkflslaersktfsLeLlesvlsnhgdvfr............khpellqllkqklcplLlknlsespsfpvf 82 
                 +++Da+lvfr+ c+l  s+k     +   f ++a+rsk++sL+L++  lsnh  vf+            + + +lq++k +lc ++++n  + ++ +vf
  KHJ35084.1 305 YIRDAYLVFRSFCNL--STKVlpadQlYDFKGQAMRSKLISLHLIQISLSNHIIVFTsplstitnsksnETTGFLQAIKFYLCLSITRNG-ACSVDKVF 400
                 579************..7887776436555699**********************************999999*****************.******** PP

      Sec7_N  83 erslrivllLlkkfrseLktEievflsllililles.dsslwqrvlaLeilrrlcsdpqllvelylnYDcdeeak 156
                 e++++i++l++k +r+++k+Eievfl++++l lle  ++++ q+ +++ il+rlc+dp++lve+ylnYDcd++  
  KHJ35084.1 401 EVCCEIFWLMVKFMRASFKKEIEVFLHEIYLALLERrNAPVSQKLYFMGILQRLCGDPRALVEIYLNYDCDRNVD 475
                 ***********************************99**********************************9865 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.094
      Sec7_N   27 slaersktfsLeLlesvlsnhgdvfrkhpellqllkqklcplLlknlsespsfpvferslrivllLlkkfrseLktE 103 
                  s++e+s  +s  +++ +l n  ++f++  e l+ + ++ ++lL  ++ ++++ ++  +  +++ +L+ +  +++k E
  KHJ35084.1 1416 SQEELSVWLSTTMIQ-ALRNMITLFTHYFESLEYMLDRFLDLLALCI-TQENDTIARIGSNCLQQLILQNVTKFKPE 1490
                  555555555555553.3555566666666666666666666666666.66666666666666666666666666655 PP

>> DUF1981  Domain of unknown function (DUF1981)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.4   0.1    0.0096        35      21      65 ..     956    1003 ..     949    1009 .. 0.69
   2 ?   -0.2   0.0      0.25     9e+02      22      65 ..    1105    1148 ..    1102    1168 .. 0.82
   3 !  107.3   0.1   7.5e-35   2.7e-31       1      83 [.    1175    1257 ..    1175    1258 .. 0.98
   4 ?   -2.3   0.0       1.2   4.2e+03       8      24 ..    1284    1300 ..    1281    1306 .. 0.84
   5 ?    3.0   0.0     0.025        89      36      64 ..    1471    1500 ..    1451    1514 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0096
     DUF1981   21 Feeimsnnssaeirelvlecve...qliqsraeniksGWktifgvlta 65  
                  +++  + n+ +ei+ + +e ++   ++ q +++ +ks W+ i+ ++++
  KHJ35084.1  956 LKNATNLNNPTEIKSKHVEALKvllEIGQIEGNFLKSSWRDILMCVSQ 1003
                  5555555667777777666555000556679************99887 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.25
     DUF1981   22 eeimsnnssaeirelvlecveqliqsraeniksGWktifgvlta 65  
                  eei  + +++  r + l+ + ++   +++ ++  W++i+ vl+ 
  KHJ35084.1 1105 EEIKISGQNESPRTYSLQKLVEISYYNMTRVRFEWTNIWAVLGE 1148
                  5666566677778888888888888999999**********975 PP

  == domain 3  score: 107.3 bits;  conditional E-value: 7.5e-35
     DUF1981    1 kflekeelsnfkfQkefLkPFeeimsnnssaeirelvlecveqliqsraeniksGWktifgvltaaakeeneslvrlafqilk 83  
                  +f+e+eel+ fkfQk+fLkPFe++m n++ ++++++ l+c+ q+iq+r+eni+sGW+t+fgv+t aake  es+v+laf+ ++
  KHJ35084.1 1175 RFMEIEELPGFKFQKDFLKPFEHVMLNSTVVTVKDMALRCLIQMIQARGENIRSGWRTMFGVFTIAAKEPYESIVSLAFENVN 1257
                  69*****************************************************************************9886 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 1.2
     DUF1981    8 lsnfkfQkefLkPFeei 24  
                   +n +fQk+ L+ +e++
  KHJ35084.1 1284 SKNTRFQKKGLQAMETL 1300
                  5799*******999875 PP

  == domain 5  score: 3.0 bits;  conditional E-value: 0.025
     DUF1981   36 lvlecveqliqsraenik.sGWktifgvlt 64  
                  +  +c++qli +++++ k   W +i gv+ 
  KHJ35084.1 1471 IGSNCLQQLILQNVTKFKpENWSQIVGVFV 1500
                  5568*************6379*99999985 PP

>> DCB  Dimerisation and cyclophilin-binding domain of Mon2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.0   1.7   1.3e-23   4.7e-20      21     175 ..      17     183 ..       3     185 .. 0.82
   2 ?   -4.2   0.0       3.1   1.1e+04      70      92 ..     920     942 ..     914     969 .. 0.70
   3 ?    0.2   0.0      0.15   5.3e+02      57      89 ..    1188    1221 ..    1163    1228 .. 0.80
   4 ?    3.8   0.1     0.011        39      34     113 ..    1427    1508 ..    1414    1531 .. 0.79

  Alignments for each domain:
  == domain 1  score: 72.0 bits;  conditional E-value: 1.3e-23
         DCB  21 skrkhskvkeasekgilkLktikssseeeeqslaeaseeilkPlllacetknpkivqiaLgslqrLisheviseea.............iskiietlwk 106
                 sk  +++v+  + ++  +Lk+ik+++     +l +  e i+ Pl la +  +  + ++aL+++ +Lis+++ s  +             i++ i+t+++
  KHJ35084.1  17 SKEAQKSVQL-AASVQQALKEIKENE----PNLPAP-EIIFAPLQLATKLGSISLCTVALDCIGKLISYSYFSIPSpsnvekdlsqdplIERAIDTICD 109
                 3333334433.345666777777777....788777.9*********************************994444455666777888********** PP

         DCB 107 llelgve...ielkvLqtllllvttss.vvhgdtlakalvlCfrL.hfskdnvvqntAaAtlrQlvsvvFeRvv 175
                 +++ ++    i+l+++++ll +v  ++ vvhg  l+ka++  +++  +sk+n++q+ A+ tl+Q+v +vFeRv 
  KHJ35084.1 110 CFKGETTpveIQLQIIKSLLAAVLNDKiVVHGAGLLKAVRQVYNVfLLSKNNANQQVAQGTLTQMVGTVFERVK 183
                 **98754555*****************9****************97899999********************96 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 3.1
         DCB  70 tknpkivqiaLgslqrLishevi 92 
                 + n +i+ ++++ ++  i + ++
  KHJ35084.1 920 SHNIQIIRLCMEGMKLAIRVACV 942
                 66778888888887777776666 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.15
         DCB   57 seeilkPlllac.etknpkivqiaLgslqrLish 89  
                   +++lkP+     ++  + + ++aL +l ++i+ 
  KHJ35084.1 1188 QKDFLKPFEHVMlNSTVVTVKDMALRCLIQMIQA 1221
                  589*****8765599999999**********986 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.011
         DCB   34 kgilkLktikssseeeeqslaeaseeilkPlllacetknpkivqiaLgslqrLishevis..eeaiskiietlwkllelgve 113 
                   +i +L+++ +  ++  +sl +  + +l  l l     n  i  i  ++lq+Li ++v +   e+ s+i+  +++l++  + 
  KHJ35084.1 1427 TMIQALRNMITLFTHYFESLEYMLDRFLDLLALCITQENDTIARIGSNCLQQLILQNVTKfkPENWSQIVGVFVELFDRTTA 1508
                  566777777777766688888888888888888888889999************99997744677999**999999987665 PP

>> SPAN-X  Sperm protein associated with nucleus, mapped to X chromosome
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.2      0.75   2.7e+03      24      48 ..      17      41 ..      13      44 .. 0.86
   2 ?   11.1   0.1   0.00011       0.4      18      61 ..     602     647 ..     598     665 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.75
      SPAN-X 24 ndemqetpngdsapeqslkKlKtse 48
                + e q+ ++ +   +q+lk +K  e
  KHJ35084.1 17 SKEAQKSVQLAASVQQALKEIKENE 41
                6788999999999********9876 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00011
      SPAN-X  18 eSnnkendemqetpngdsapeq..slkKlKtseystilvlsyrkkk 61 
                 +S n en + + tp+ d +peq    kK Kt++y  i  ++y+ k 
  KHJ35084.1 602 KSGNGENGTIPHTPKLDDDPEQleKEKKRKTAKYNAIRQFNYKPKR 647
                 68899*****************77789*************998665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1813 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       664  (0.037035); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.97u 0.29s 00:00:01.26 Elapsed: 00:00:00.44
# Mc/sec: 12353.35
//
Query:       KHJ35085.1  [L=577]
Description: putative vacuolar segregation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.9e-22   77.8  22.1    4.9e-16   58.6   6.5    2.3  2  FYVE            FYVE zinc finger
    2.1e-09   37.0   2.4    2.1e-09   37.0   2.4    2.4  3  Rbsn            Rabenosyn Rab binding domain
    3.1e-05   24.0   3.2    3.1e-05   24.0   3.2    3.6  5  zf-AN1          AN1-like Zinc finger
  ------ inclusion threshold ------
        0.1   12.9   0.0        0.3   11.4   0.0    1.8  1  DUF1462         Protein of unknown function (DUF1462)
       0.25   11.2   1.7       0.43   10.5   0.0    2.4  2  Rad50_zn_hook   Rad50 zinc hook motif
        7.9    6.5  13.1        6.8    6.8   2.6    3.1  2  HypA            Hydrogenase/urease nickel incorporation, meta


Domain annotation for each model (and alignments):
>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   7.6   5.3e-09   1.6e-05       2      65 ..     127     196 ..     126     198 .. 0.84
   2 !   58.6   6.5   1.6e-19   4.9e-16       2      64 ..     276     347 ..     275     351 .. 0.83

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 5.3e-09
                 ---...--SB-TT..T--B--SSS--EE-TTT--EE-STTS-EEE.EEGGGTEEEEE.....EE-HHHHHH CS
        FYVE   2 kwkddsevkkCei..CakkFsllrrrhhCrlCGkvvCekCssklvallekeaeeksv.....rvCkeClae 65 
                 +w++    + C++  C kk   ++    Cr CG+++Ce+++  +++l  ++a+++++     rvC++C+++
  KHJ35085.1 127 HWQKLGYNDLCTEpsCGKKLGSVNGNVNCRKCGRLFCENHTMYQIKLS-RSAQHDPLrglwcRVCETCFKS 196
                 688888888998777*****999******************9999777.5555555557777******986 PP

  == domain 2  score: 58.6 bits;  conditional E-value: 1.6e-19
                 ---...--SB-TTT--B-.-SSS--EE-TTT--EE-....STTS-EEE.EE....GGGTEEEEEEE-HHHHH CS
        FYVE   2 kwkddsevkkCeiCakkF.sllrrrhhCrlCGkvvC....ekCssklvall....ekeaeeksvrvCkeCla 64 
                  w++d++++kC+ C+++F s++ rrhhCr+CG+vvC    + Css+ +  +    ++ + + ++r+C++C +
  KHJ35085.1 276 VWEEDAAAPKCPLCHQEFgSWSFRRHHCRICGQVVCgdprTGCSSEISLEVtakkNSGDLTVDIRMCRSCQS 347
                 6*****************99****************9999889877765553333555556777******86 PP

>> Rbsn  Rabenosyn Rab binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       1.2   3.5e+03      20      35 ..      38      52 ..      34      54 .. 0.73
   2 ?   -2.7   0.1       1.7   5.2e+03      30      39 ..     370     379 ..     370     380 .. 0.84
   3 !   37.0   2.4     7e-13   2.1e-09       2      42 .]     522     562 ..     521     562 .. 0.97

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.2
        Rbsn 20 rrfDEvatLeeNLkEL 35
                  f+E ++L  N +EL
  KHJ35085.1 38 KAFEE-EHLDDNHQEL 52
                55666.8899999998 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.7
        Rbsn  30 eNLkELqeEi 39 
                 eNL EL++ i
  KHJ35085.1 370 ENLVELERGI 379
                 79****9866 PP

  == domain 3  score: 37.0 bits;  conditional E-value: 7e-13
        Rbsn   2 LeEQkflveemIkqAkkarrfDEvatLeeNLkELqeEidrl 42 
                 LeEQ+f++ em+  A+ka r DE  +L+eN+ E+  E+drl
  KHJ35085.1 522 LEEQRFMLNEMLSVARKAQRADEQIILSENMVEIGIECDRL 562
                 9*************************************986 PP

>> zf-AN1  AN1-like Zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   3.2     1e-08   3.1e-05       1      30 [.     137     169 ..     137     171 .. 0.92
   2 ?   -5.7   1.7         6   1.8e+04      16      21 ..     187     192 ..     186     194 .. 0.58
   3 ?    0.5   0.2      0.23   6.8e+02      14      23 ..     284     293 ..     278     295 .. 0.82
   4 ?    2.1   5.3     0.076   2.3e+02       6      26 ..     289     313 ..     286     317 .. 0.71
   5 ?   -2.7   0.1       2.4   7.1e+03      15      20 ..     341     346 ..     335     348 .. 0.79

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 1e-08
      zf-AN1   1 CsfksCkkkdflp...fkCryCgkvFClkHrlp 30 
                 C+++sC+kk+  +   ++Cr+Cg+ FC++H ++
  KHJ35085.1 137 CTEPSCGKKLGSVngnVNCRKCGRLFCENHTMY 169
                 99********877799**************886 PP

  == domain 2  score: -5.7 bits;  conditional E-value: 6
      zf-AN1  16 CryCgk 21 
                 Cr C+ 
  KHJ35085.1 187 CRVCET 192
                 666654 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.23
      zf-AN1  14 fkCryCgkvF 23 
                  kC+ C+++F
  KHJ35085.1 284 PKCPLCHQEF 293
                 69*****998 PP

  == domain 4  score: 2.1 bits;  conditional E-value: 0.076
      zf-AN1   6 Ckkkd....flpfkCryCgkvFClk 26 
                 C+++     f   +Cr Cg+v C +
  KHJ35085.1 289 CHQEFgswsFRRHHCRICGQVVCGD 313
                 77776444344489*********86 PP

  == domain 5  score: -2.7 bits;  conditional E-value: 2.4
      zf-AN1  15 kCryCg 20 
                  Cr+C+
  KHJ35085.1 341 MCRSCQ 346
                 599997 PP

>> DUF1462  Protein of unknown function (DUF1462)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0    0.0001       0.3      15      77 ..      21      84 ..      14      88 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0001
     DUF1462 15 lPssketyeWleaalkrk.ypeqkleleyvDieeekeeeekkefaekiledelfyPlvviedev 77
                +P +++ ++   +a+k k ++e++l+ ++ ++ e +++e k+ f +++++ + f Plvvi++++
  KHJ35085.1 21 IPLAHQRISQTTPAVKHKaFEEEHLDDNHQELPEVQQDEVKTWFDKQVVKAKKFQPLVVINQKL 84
                56666666666677776659999**************************************875 PP

>> Rad50_zn_hook  Rad50 zinc hook motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.7       3.6   1.1e+04      21      33 ..     154     166 ..     142     168 .. 0.65
   2 ?   10.5   0.0   0.00014      0.43      20      31 ..     283     295 ..     264     300 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 3.6
                    E-TTT--EE-HHH CS
  Rad50_zn_hook  21 cCPlCgReldeeh 33 
                     C  CgR + e+h
     KHJ35085.1 154 NCRKCGRLFCENH 166
                    5556888887776 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00014
                    E.E-TTT--EE-H CS
  Rad50_zn_hook  20 g.cCPlCgRelde 31 
                    + +CPlC++e+++
     KHJ35085.1 283 ApKCPLCHQEFGS 295
                    249********86 PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   2.9     0.023        70      63      93 ..     145     194 ..     111     207 .. 0.72
   2 ?    6.8   2.6    0.0023       6.8      52      94 ..     265     308 ..     253     351 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.023
                 EEEEE--EEEETTTS-EEECHHHHH...................S-TTTS CS
        HypA  63 eieevpvkvrCreCgkefeleekal...................rCpkCg 93 
                 ++ +v+ +v Cr+Cg+ f ++++ +                    C++C 
  KHJ35085.1 145 KLGSVNGNVNCRKCGRLFCENHTMYqiklsrsaqhdplrglwcrVCETCF 194
                 4668899999****999986653224577888999999999777777775 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0023
                 HCC.TTTT-EEEEEEE--EEEETTTS-EEECHH.HHHS-TTTSS CS
        HypA  52 aegtvlegaeLeieevpvkvrCreCgkefelee.kalrCpkCgs 94 
                 +++++le++ +  ee  +  +C  C++ef + + ++ +C  Cg+
  KHJ35085.1 265 NQKKILEQSIVVWEEDAAAPKCPLCHQEFGSWSfRRHHCRICGQ 308
                 57788999999******************977644788****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (577 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1048  (0.0584528); expected 358.6 (0.02)
Passed bias filter:                      502  (0.0279993); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.38
# Mc/sec: 4497.50
//
Query:       KHJ35086.1  [L=99]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.089   12.7   1.5       0.15   12.0   1.5    1.4  1  zf-CCHC_6  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_6  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.5   8.2e-06      0.15       3      22 ..       5      23 ..       3      43 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 8.2e-06
   zf-CCHC_6  3 KCknCGAFGHtarSkrCPmk 22
                KC+nCG   H+  S+rC  +
  KHJ35086.1  5 KCRNCGGP-HHYISRRCLAR 23
                9*****96.6666****544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      602  (0.0335769); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 755.17
//
Query:       KHJ35087.1  [L=135]
Description: putative tetratricopeptide repeat family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-15   56.7  10.2    1.2e-09   38.3   3.0    2.1  2  TPR_12    Tetratricopeptide repeat
    3.6e-13   48.9  13.0    1.1e-05   25.2   0.5    3.2  3  TPR_10    Tetratricopeptide repeat
      4e-10   39.0  15.9      4e-05   23.4   5.1    3.5  3  TPR_2     Tetratricopeptide repeat
    7.6e-10   38.2  17.4    9.3e-06   25.3   5.8    3.7  4  TPR_1     Tetratricopeptide repeat
    1.5e-07   31.0   6.5      0.034   14.2   0.3    3.6  3  TPR_7     Tetratricopeptide repeat
    2.6e-07   30.3  10.7      0.048   13.9   0.2    3.5  3  TPR_8     Tetratricopeptide repeat
    5.8e-07   29.9   4.9    2.8e-06   27.7   3.1    2.5  2  TPR_19    Tetratricopeptide repeat
    5.4e-06   27.0   8.2     0.0038   17.8   1.9    2.4  2  TPR_16    Tetratricopeptide repeat
    9.7e-06   25.2   0.3    1.7e-05   24.4   0.3    1.3  1  TPR_MalT  MalT-like TPR region
    1.7e-05   25.2   4.1      0.011   16.5   0.5    2.9  3  TPR_14    Tetratricopeptide repeat
    0.00053   19.6   7.5     0.0041   16.8   1.9    3.1  2  TPR_11    TPR repeat
    0.00092   19.6   0.2       0.68   10.7   0.1    3.3  3  TPR_4     Tetratricopeptide repeat
     0.0035   17.3   3.5     0.0035   17.3   3.5    3.1  3  TPR_3     Tetratricopeptide repeat
     0.0097   16.0   2.6      0.013   15.5   0.3    2.1  2  MIT       MIT (microtubule interacting and transport) domain
  ------ inclusion threshold ------
      0.015   15.5   1.5        2.2    8.7   0.1    3.4  3  PPR       PPR repeat
      0.023   14.9   4.7        0.3   11.3   0.4    2.7  3  ANAPC3    Anaphase-promoting complex, cyclosome, subunit 3
      0.029   14.1   2.5       0.32   10.7   0.0    2.7  3  RPN7      26S proteasome subunit RPN7
      0.052   13.9   8.4       0.81   10.2   0.2    3.7  3  TPR_17    Tetratricopeptide repeat
       0.19   12.5  10.0         13    6.7   0.1    4.1  4  TPR_6     Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.7   8.3e-08   7.8e-05       7      33 ..      11      37 ..       5      43 .. 0.57
   2 !   38.3   3.0   1.3e-12   1.2e-09       2      67 ..      51     113 ..      50     114 .. 0.89

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 8.3e-08
      TPR_12  7 nnlaavlrrlgrydeAlellekaleia 33
                nn a+ l+++g+y+eA+ ++++ale++
  KHJ35087.1 11 NNKALGLYQQGKYTEAEYYYKQALELR 37
                355555555555555555555555554 PP

  == domain 2  score: 38.3 bits;  conditional E-value: 1.3e-12
      TPR_12   2 vatalnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgryeeAlel 67 
                 +a ++n l+++++ +gr+deA++ll+ a + +r+l  ++ ++ a t+ nLgrly++ g+ ++A+e+
  KHJ35087.1  51 IALSQNALGELYLSMGRLDEAEKLLHSA-ASYREL--HEDYDRAYTRDNLGRLYEMKGDMKAAREW 113
                 6788989*********************.666699..55557*********************986 PP

>> TPR_10  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   2.1   2.6e-08   2.4e-05       5      32 ..      10      37 ..       7      39 .. 0.95
   2 !   25.2   0.5   1.1e-08   1.1e-05       2      37 ..      52      86 ..      51      89 .. 0.88
   3 !    6.4   0.1    0.0088       8.3       2      24 ..      91     113 ..      90     114 .. 0.91

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 2.6e-08
      TPR_10  5 lnNLanalrqrgrydeAealleealair 32
                lnN a  l+q+g+y+eAe ++++al++r
  KHJ35087.1 10 LNNKALGLYQQGKYTEAEYYYKQALELR 37
                8*************************97 PP

  == domain 2  score: 25.2 bits;  conditional E-value: 1.1e-08
      TPR_10  2 AsslnNLanalrqrgrydeAealleealairrrllG 37
                A s+n L+ ++ ++gr+deAe+l  ++ a +r+l++
  KHJ35087.1 52 ALSQNALGELYLSMGRLDEAEKL-LHSAASYRELHE 86
                889********************.888888888875 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0088
      TPR_10   2 AsslnNLanalrqrgrydeAeal 24 
                 A ++ NL++++   g+ ++A+++
  KHJ35087.1  91 AYTRDNLGRLYEMKGDMKAAREW 113
                 8899***********99999986 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   5.1   4.3e-08     4e-05       1      31 [.       7      37 ..       7      40 .. 0.92
   2 !   15.5   0.2   1.5e-05     0.014       3      29 ..      54      80 ..      52      85 .. 0.86
   3 !    6.8   0.2    0.0088       8.3       5      22 ..      95     112 ..      91     113 .. 0.88

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 4.3e-08
       TPR_2  1 aealynlGlayyklgdyeeAleafekAleld 31
                a  l+n +l +y++g+y eA+ ++++Alel 
  KHJ35087.1  7 AAELNNKALGLYQQGKYTEAEYYYKQALELR 37
                56799************************95 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 1.5e-05
       TPR_2  3 alynlGlayyklgdyeeAleafekAle 29
                  ++lG++y+ +g+++eA++++  A +
  KHJ35087.1 54 SQNALGELYLSMGRLDEAEKLLHSAAS 80
                5789****************9988866 PP

  == domain 3  score: 6.8 bits;  conditional E-value: 0.0088
       TPR_2   5 ynlGlayyklgdyeeAle 22 
                  nlG++y+ +gd + A+e
  KHJ35087.1  95 DNLGRLYEMKGDMKAARE 112
                 59**************98 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   5.8   9.8e-09   9.3e-06       2      31 ..       8      37 ..       7      40 .. 0.92
   2 !   14.8   0.1     2e-05     0.018       4      25 ..      55      76 ..      52      82 .. 0.85
   3 ?   -2.3   0.1       4.9   4.6e+03      22      27 ..      86      91 ..      86      94 .. 0.63
   4 ?    5.3   0.1      0.02        19       6      22 ..      96     112 ..      96     113 .. 0.93

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 9.8e-09
                HHHHHHHHHHHHTT-HHHHHHHHHHHHHHS CS
       TPR_1  2 kalynlGnayfklgkydeAleyyekALeln 31
                  l+n+++ ++++gky eA+ yy++ALel+
  KHJ35087.1  8 AELNNKALGLYQQGKYTEAEYYYKQALELR 37
                679*************************96 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 2e-05
                HHHHHHHHHHTT-HHHHHHHHH CS
       TPR_1  4 lynlGnayfklgkydeAleyye 25
                 + lG +y+++g++deA++   
  KHJ35087.1 55 QNALGELYLSMGRLDEAEKLLH 76
                678***************9765 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 4.9
                HHHHHH CS
       TPR_1 22 eyyekA 27
                e+y++A
  KHJ35087.1 86 EDYDRA 91
                466665 PP

  == domain 4  score: 5.3 bits;  conditional E-value: 0.02
                 HHHHHHHHTT-HHHHHH CS
       TPR_1   6 nlGnayfklgkydeAle 22 
                 nlG +y  +g+ + A e
  KHJ35087.1  96 NLGRLYEMKGDMKAARE 112
                 9************9976 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.3   3.6e-05     0.034       3      29 ..      11      37 ..       9      44 .. 0.81
   2 !   12.9   0.4   9.3e-05     0.088       3      33 ..      56      84 ..      56      91 .. 0.85
   3 ?    5.7   0.0     0.018        17       3      20 ..      95     112 ..      93     120 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3.6e-05
       TPR_7  3 lnLarlysrlGdyeeAielyeqsLalt 29
                +n a    ++G+y eA+ +y+q+L+l+
  KHJ35087.1 11 NNKALGLYQQGKYTEAEYYYKQALELR 37
                6666667789************99987 PP

  == domain 2  score: 12.9 bits;  conditional E-value: 9.3e-05
       TPR_7  3 lnLarlysrlGdyeeAielyeqsLaltkdpe 33
                ++L++ly ++G+ +eA++l+    a  ++++
  KHJ35087.1 56 NALGELYLSMGRLDEAEKLLHS--AASYREL 84
                69*****************988..6666655 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.018
       TPR_7   3 lnLarlysrlGdyeeAie 20 
                 +nL+rly+  Gd++ A e
  KHJ35087.1  95 DNLGRLYEMKGDMKAARE 112
                 69***********99976 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.1   2.0     9e-05     0.085       6      33 ..      12      39 ..      10      40 .. 0.84
   2 !   13.9   0.2   5.1e-05     0.048       4      24 ..      55      75 ..      52      83 .. 0.85
   3 !    8.2   0.1    0.0035       3.3       6      22 ..      96     112 ..      88     113 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 9e-05
                HHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  6 nlgsiylklgdyeeAkeyyekaleldpd 33
                n+++ + ++g+y eA+ yy++alel+ +
  KHJ35087.1 12 NKALGLYQQGKYTEAEYYYKQALELRLK 39
                66666789****************9866 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 5.1e-05
                HHHHHHHHHHTT-HHHHHHHH CS
       TPR_8  4 yynlgsiylklgdyeeAkeyy 24
                 + lg +yl++g+++eA++ +
  KHJ35087.1 55 QNALGELYLSMGRLDEAEKLL 75
                578**************9976 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0035
                 HHHHHHHHTT-HHHHHH CS
       TPR_8   6 nlgsiylklgdyeeAke 22 
                 nlg++y+ +gd+++A e
  KHJ35087.1  96 NLGRLYEMKGDMKAARE 112
                 8**************98 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   3.1   2.9e-09   2.8e-06       1      61 [.      17      88 ..      17      94 .. 0.83
   2 ?    1.9   0.1      0.35   3.3e+02      20      46 ..      86     112 ..      78     116 .. 0.72

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 2.9e-09
      TPR_19  1 llaegdyaeAlalleqalqe..........dpknaearl.lLAeallalgqldeAealLdalpeedpddary 61
                l+++g+y+eA  +++qal+            p++ ++   +L e++l++g+ldeAe+lL  +      +++y
  KHJ35087.1 17 LYQQGKYTEAEYYYKQALELrlknisdpcvPPQSIALSQnALGELYLSMGRLDEAEKLLHSAASYRELHEDY 88
                789***************998888887776666766666799*****************9888776666666 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.35
      TPR_19  20 edpknaearllLAeallalgqldeAea 46 
                 ed + a+ r +L +++   g+ ++A++
  KHJ35087.1  86 EDYDRAYTRDNLGRLYEMKGDMKAARE 112
                 455555555578889999999998886 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.5   0.00018      0.17       3      27 ..      13      37 ..      11      39 .. 0.88
   2 !   17.8   1.9     4e-06    0.0038       2      56 ..      57     113 ..      56     120 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.00018
      TPR_16  3 laraalragdyddAaaaleaalkrd 27
                +a+ ++++g+y++A+ ++++al+++
  KHJ35087.1 13 KALGLYQQGKYTEAEYYYKQALELR 37
                68889***************99875 PP

  == domain 2  score: 17.8 bits;  conditional E-value: 4e-06
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssPdaaeAll..llgdaalrqgrlaeAaal 56 
                 al+ ++l  g+ d+A+++l+ a  ++  + d  +A+   +lg+++  +g++++A+++
  KHJ35087.1  57 ALGELYLSMGRLDEAEKLLHSAASYRELHEDYDRAYTrdNLGRLYEMKGDMKAAREW 113
                 799*************************999888888457**************998 PP

>> TPR_MalT  MalT-like TPR region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.3   1.8e-08   1.7e-05      90     185 ..      17     115 ..       4     120 .. 0.82

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 1.8e-08
    TPR_MalT  90 lvaqGrLheAletyeqalql....ateqglqqlplvgfllvlladllyEwndLeeAeqhlqeGielleqlepeaaldayvllarialaqGdleeAetll 184
                 l +qG+  eA+  y+qal+l    + +++ +++ ++   +  l++l++ +++L+eAe+ l+ +  + e +e   ++  +  l r++  +Gd+++A ++ 
  KHJ35087.1  17 LYQQGKYTEAEYYYKQALELrlknISDPCVPPQSIALS-QNALGELYLSMGRLDEAEKLLHSAASYRELHEDYDRAYTRDNLGRLYEMKGDMKAAREWR 114
                 5689*************998433345555555555544.4667********************9999999998888888999*************9986 PP

    TPR_MalT 185 e 185
                  
  KHJ35087.1 115 S 115
                 5 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0    0.0054       5.1      10      31 ..      16      37 ..      13      42 .. 0.86
   2 !   16.5   0.5   1.1e-05     0.011       6      39 ..      57      93 ..      53      95 .. 0.86
   3 ?    0.3   0.1       1.9   1.8e+03       7      22 ..      97     112 ..      90     121 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.0054
      TPR_14 10 allalGdpdeAiallrralala 31
                 l+++G++ eA+ ++++al+l 
  KHJ35087.1 16 GLYQQGKYTEAEYYYKQALELR 37
                689****************986 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 1.1e-05
      TPR_14  6 alaeallalGdpdeAiallrrala...laPddaeawl 39
                al+e++l  G++deA++ll+ a +   l+ d ++a++
  KHJ35087.1 57 ALGELYLSMGRLDEAEKLLHSAASyreLHEDYDRAYT 93
                89*******************9877668888888876 PP

  == domain 3  score: 0.3 bits;  conditional E-value: 1.9
      TPR_14   7 laeallalGdpdeAia 22 
                 l+++++  Gd ++A++
  KHJ35087.1  97 LGRLYEMKGDMKAARE 112
                 7899999999998886 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   1.9   4.3e-06    0.0041       4      27 ..      17      40 ..      16      42 .. 0.90
   2 ?    4.4   0.3     0.032        30       1      16 [.      59      74 ..      59     105 .. 0.75

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 4.3e-06
      TPR_11  4 yyeqGkyeeAieaYkkAlkldPdn 27
                +y+qGky+eA   Yk+Al+l+ +n
  KHJ35087.1 17 LYQQGKYTEAEYYYKQALELRLKN 40
                79*****************98655 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.032
      TPR_11  1 GdayyeqGkyeeAiea 16
                G +y + G+++eA + 
  KHJ35087.1 59 GELYLSMGRLDEAEKL 74
                7889999999999555 PP

>> TPR_4  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.0      0.45   4.2e+02       7      21 ..      13      27 ..      10      27 .. 0.86
   2 !   10.7   0.1   0.00072      0.68       4      24 ..      55      75 ..      52      77 .. 0.86
   3 ?    3.1   0.0      0.21     2e+02       3      23 ..      93     113 ..      91     114 .. 0.87

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.45
       TPR_4  7 LArallalGdldeAr 21
                 A  l+++G + eA+
  KHJ35087.1 13 KALGLYQQGKYTEAE 27
                58889******9997 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00072
       TPR_4  4 llaLArallalGdldeArall 24
                + aL++++l  G+ldeA+ ll
  KHJ35087.1 55 QNALGELYLSMGRLDEAEKLL 75
                669**************9776 PP

  == domain 3  score: 3.1 bits;  conditional E-value: 0.21
       TPR_4   3 allaLArallalGdldeAral 23 
                 ++ +L+r++   Gd  +Ar++
  KHJ35087.1  93 TRDNLGRLYEMKGDMKAAREW 113
                 6779**************998 PP

>> TPR_3  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   3.5   3.7e-06    0.0035      11      36 .]      17      40 ..      14      40 .. 0.88
   2 ?    4.4   0.0      0.04        38      13      29 ..      64      78 ..      57      83 .. 0.79
   3 ?   -2.6   0.0       6.3     6e+03      15      21 ..      86      92 ..      85      94 .. 0.80

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 3.7e-06
                HHHTT-HHHHHHH..HHHHHHH-TT- CS
       TPR_3 11 fynkkkyqeArelfsYallaildken 36
                +y+++ky+eA+ +  Y+++  l+ +n
  KHJ35087.1 17 LYQQGKYTEAEYY--YKQALELRLKN 40
                8************..99***998766 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.04
                HTT-HHHHHHH..HHHH CS
       TPR_3 13 nkkkyqeArelfsYall 29
                ++++++eA+ l++   +
  KHJ35087.1 64 SMGRLDEAEKLLH--SA 78
                69*********99..54 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 6.3
                T-HHHHH CS
       TPR_3 15 kkyqeAr 21
                ++y+ A+
  KHJ35087.1 86 EDYDRAY 92
                6899998 PP

>> MIT  MIT (microtubule interacting and transport) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.3   1.4e-05     0.013       4      35 ..       7      38 ..       6      61 .. 0.88
   2 ?    0.1   0.1      0.89   8.4e+02       1      24 [.      68      92 ..      68      94 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.4e-05
         MIT  4 AlelvkkAveeDnagnyeeAlelYkealelLl 35
                A el +kA  + ++g+y eA  +Yk+alel l
  KHJ35087.1  7 AAELNNKALGLYQQGKYTEAEYYYKQALELRL 38
                7899999*9*******************9855 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.89
         MIT  1 ldkAlelvkkA.veeDnagnyeeAl 24
                ld+A +l++ A   ++ +++y+ A+
  KHJ35087.1 68 LDEAEKLLHSAaSYRELHEDYDRAY 92
                5677777777745667888888887 PP

>> PPR  PPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.0       0.1        97       9      27 ..      16      34 ..      15      38 .. 0.84
   2 ?    8.7   0.1    0.0023       2.2       5      24 ..      57      76 ..      56      78 .. 0.84
   3 ?   -0.4   0.0       1.8   1.7e+03      10      22 ..     101     113 ..      96     116 .. 0.75

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.1
         PPR  9 gycknGkleeAlelfkeMk 27
                g+ + Gk+ eA+ ++k+ +
  KHJ35087.1 16 GLYQQGKYTEAEYYYKQAL 34
                67899*******9999865 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0023
         PPR  5 slIsgycknGkleeAlelfk 24
                +l   y + G+l+eA++l++
  KHJ35087.1 57 ALGELYLSMGRLDEAEKLLH 76
                5666799***********96 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 1.8
         PPR  10 ycknGkleeAlel 22 
                 y  +G+++ A e+
  KHJ35087.1 101 YEMKGDMKAAREW 113
                 6678888888876 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.4   0.00032       0.3      29      55 ..      13      40 ..       7      46 .. 0.85
   2 ?    4.3   0.1     0.051        48      29      49 ..      58      78 ..      48      90 .. 0.72
   3 ?    0.4   0.2      0.83   7.8e+02      20      45 ..      85     113 ..      72     127 .. 0.56

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00032
                HHHHHHHTT-HHHHHHHHHCT.SHHHC- CS
      ANAPC3 29 lAlclylngqykrAyellrka.klnsks 55
                +Al ly++g+y++A +++++a +l+ k+
  KHJ35087.1 13 KALGLYQQGKYTEAEYYYKQAlELRLKN 40
                5889****************98887766 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.051
                HHHHHHHTT-HHHHHHHHHCT CS
      ANAPC3 29 lAlclylngqykrAyellrka 49
                l++ ++++g+ ++A +ll++a
  KHJ35087.1 58 LGELYLSMGRLDEAEKLLHSA 78
                666777777777777777666 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.83
                 H--HHHHHH...HHHHHHHTT-HHHHHHH CS
      ANAPC3  20 tespedayl...lAlclylngqykrAyel 45 
                 +e+++ ay    l+  +   g+ k A e+
  KHJ35087.1  85 HEDYDRAYTrdnLGRLYEMKGDMKAAREW 113
                 45555566555556666666777777776 PP

>> RPN7  26S proteasome subunit RPN7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.71   6.7e+02      39      64 ..      10      35 ..       3      46 .. 0.75
   2 ?   10.7   0.0   0.00034      0.32      33      64 ..      49      80 ..      32      83 .. 0.87
   3 ?    2.5   0.2      0.11     1e+02      33      61 ..      88     116 ..      79     126 .. 0.80

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.71
                HHHHHHHHHHCT-HHHHHHHHHTCCC CS
        RPN7 39 kldlaehYlkigdleeAlkaysrire 64
                 +++a   ++ g+++eA  +y++++e
  KHJ35087.1 10 LNNKALGLYQQGKYTEAEYYYKQALE 35
                55566666778888888888888776 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00034
                HHHHHHHHHHHHHHHHCT-HHHHHHHHHTCCC CS
        RPN7 33 eeirrakldlaehYlkigdleeAlkaysrire 64
                 +i+  +++l+e Yl++g l+eA k++  +  
  KHJ35087.1 49 QSIALSQNALGELYLSMGRLDEAEKLLHSAAS 80
                589999*******************9988765 PP

  == domain 3  score: 2.5 bits;  conditional E-value: 0.11
                 HHHHHHHHHHHHHHHHCT-HHHHHHHHHT CS
        RPN7  33 eeirrakldlaehYlkigdleeAlkaysr 61 
                  + + + ++l++ Y + gd++ A ++ s+
  KHJ35087.1  88 YDRAYTRDNLGRLYEMKGDMKAAREWRSK 116
                 566677889*************9887665 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.5       1.2   1.2e+03      16      33 ..      10      27 ..       7      28 .. 0.82
   2 ?   10.2   0.2   0.00086      0.81      13      34 .]      52      73 ..      29      73 .. 0.85
   3 ?    6.4   0.1     0.015        14      17      34 .]      95     112 ..      83     112 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 1.2
      TPR_17 16 ynnLAelllknGdlmtAr 33
                +nn+A  l+++G++ +A+
  KHJ35087.1 10 LNNKALGLYQQGKYTEAE 27
                577777789999999997 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00086
      TPR_17 13 adaynnLAelllknGdlmtArq 34
                a + n L+el+l+ G+l++A++
  KHJ35087.1 52 ALSQNALGELYLSMGRLDEAEK 73
                677899**************86 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.015
      TPR_17  17 nnLAelllknGdlmtArq 34 
                  nL++l++++Gd + Ar+
  KHJ35087.1  95 DNLGRLYEMKGDMKAARE 112
                 59**********999986 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.8     0.076        72       9      28 ..      16      35 ..      12      37 .. 0.83
   2 ?    6.7   0.1     0.014        13       6      25 ..      58      77 ..      57      88 .. 0.88
   3 ?    2.7   0.0      0.25   2.4e+02       3      20 ..      74      92 ..      74      94 .. 0.80
   4 ?    4.6   0.2     0.061        58       5      21 ..      96     112 ..      92     112 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.076
                HHHHHHHHHHHHHHHHHHHH CS
       TPR_6  9 syrklgdtdkAlealerlik 28
                 ++++g++++A  ++++ ++
  KHJ35087.1 16 GLYQQGKYTEAEYYYKQALE 35
                578889*********99886 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.014
                HHHHHHHHHHHHHHHHHHHH CS
       TPR_6  6 lalsyrklgdtdkAlealer 25
                l+++y+++g+ d+A ++l +
  KHJ35087.1 58 LGELYLSMGRLDEAEKLLHS 77
                79************998865 PP

  == domain 3  score: 2.7 bits;  conditional E-value: 0.25
                HHHHHHHHHH.HHHHHHHH CS
       TPR_6  3 lyklalsyrk.lgdtdkAl 20
                l++ a syr+   d+d+A 
  KHJ35087.1 74 LLHSAASYRElHEDYDRAY 92
                6788999999668999995 PP

  == domain 4  score: 4.6 bits;  conditional E-value: 0.061
                 HHHHHHHHHHHHHHHHH CS
       TPR_6   5 klalsyrklgdtdkAle 21 
                 +l+++y++ gd  +A+e
  KHJ35087.1  96 NLGRLYEMKGDMKAARE 112
                 79*****988**99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       430  (0.0239835); expected 358.6 (0.02)
Passed bias filter:                      302  (0.0168442); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.42
# Mc/sec: 973.10
//
Query:       KHJ35088.1  [L=558]
Description: putative cactin protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.1e-59  199.6   6.8    4.1e-59  199.6   6.8    2.0  2  Cactin_mid      Conserved mid region of cactin
    1.1e-57  193.3   6.2    1.9e-57  192.6   6.2    1.4  1  CactinC_cactus  Cactus-binding C-terminus of cactin protein
  ------ inclusion threshold ------
      0.027   14.8   0.0      0.086   13.2   0.0    1.8  1  SF3A2           Pre-mRNA-splicing factor SF3a complex subunit


Domain annotation for each model (and alignments):
>> Cactin_mid  Conserved mid region of cactin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.6   6.8   6.9e-63   4.1e-59       4     197 ..      56     242 ..      54     243 .. 0.95
   2 ?    0.2   0.3      0.09   5.4e+02     108     148 ..     244     288 ..     241     296 .. 0.56

  Alignments for each domain:
  == domain 1  score: 199.6 bits;  conditional E-value: 6.9e-63
  Cactin_mid   4 eeeqyeeweakEeeFhleqakkraeiRikegrakpiDlLaknlrlvdeeedeedde..adleieleePykileglsleeleeleediksyleleksekn 100
                 e+eq ++w+++E++F+l+q+kk+aeiR +egrakpiD+La++l+++d+++d  dd+  ++ + e  +P+ ++egl++ +l el +di+sy++lek++ n
  KHJ35088.1  56 EDEQTRKWVSEEDNFVLKQSKKKAEIRAREGRAKPIDWLAVILQVIDPDRDLLDDDddHNFQHEGMNPESVFEGLDDTQLTELSKDISSYITLEKNKAN 154
                 89**************************************************999966777777788******************************** PP

  Cactin_mid 101 aefWkallvvckdeleklkkkeeekeaaeeaeesgihasveadikkilkgksleeLeelekqikekLesgeavDveYWesllkklkvykAkarLkdi 197
                  e+Wk+++++c+d ++kl+           ++e+++  sv+ad++k+l++k++e+Le lekqik+kL+s+ ++Dv+YW  ll++l ++kAka+Lk++
  KHJ35088.1 155 LEYWKMMRTICEDLRQKLNP---------LNTEGRAVGSVAADVDKLLRPKTFEQLEILEKQIKAKLQSNVSLDVDYWDYLLRNLLLWKAKAKLKEV 242
                 *****************644.........5678899***********************************************************97 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.09
  Cactin_mid 108 lvvckdeleklkkkeeekeaaeeaeesgi....hasveadikkil 148
                 ++v++ +l++lkk+++e +++++ ++++i    +++ +++i++ +
  KHJ35088.1 244 QTVIDSRLNTLKKQHQEDAKRARIRMQEIlsnlNQNSSKNIEHNF 288
                 678888999988877774443344444441111444455555555 PP

>> CactinC_cactus  Cactus-binding C-terminus of cactin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  192.6   6.2   3.1e-61   1.9e-57       1     125 []     421     558 .]     421     558 .] 0.98

  Alignments for each domain:
  == domain 1  score: 192.6 bits;  conditional E-value: 3.1e-61
  CactinC_cactus   1 wedkyelrkPkyfnrvktgyeWnkynkthydednpPPkvvqgykFnifypdLidkekaptykiekk...........teeeetvllrfkagkpYe 84 
                     w+dky++rkP+yfnrv++gyeWnkyn+thyd+dnpPPkvvqgykFnifypdLidk+kapt+ki ++           + ee+t+l+rf ag+pYe
      KHJ35088.1 421 WADKYRPRKPRYFNRVQMGYEWNKYNQTHYDHDNPPPKVVQGYKFNIFYPDLIDKSKAPTFKIIREngrkkgmsfapAGEEDTCLIRFIAGPPYE 515
                     99**************************************************************999*********988999************* PP

  CactinC_cactus  85 diafrivdkewdlskk..rgfkssfergvlqlyfnfkkskyrr 125
                     diafrivdkewd+s+k  rgf+ssf++g+lql+f++kk  yr+
      KHJ35088.1 516 DIAFRIVDKEWDYSAKrdRGFRSSFDKGILQLHFQYKKIYYRK 558
                     *************998779**********************97 PP

>> SF3A2  Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.4e-05     0.086      18      81 ..     460     529 ..     443     544 .. 0.71

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.4e-05
       SF3A2  18 qvgllvevkypeike.evkPlhrimsaleqkleekpd...kkvqyLl..iaaePYetiafkipskeidks 81 
                  +g  +++ yp+  + +++P ++i+ +  +k+ ++     ++   L+  ia  PYe iaf+i +ke d s
  KHJ35088.1 460 VQGYKFNIFYPDLIDkSKAPTFKIIRENGRKKGMSFApagEEDTCLIrfIAGPPYEDIAFRIVDKEWDYS 529
                 5788899999987774777****998888666553323344444454449************99997765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       986  (0.0549947); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.25s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3966.58
//
Query:       KHJ35089.1  [L=388]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.21s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 3014.69
//
Query:       KHJ35090.1  [L=109]
Description: putative effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (109 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       480  (0.0267723); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.27s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 777.67
//
Query:       KHJ35091.1  [L=569]
Description: putative adenylosuccinate lyase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-23   83.0   0.0      4e-23   82.3   0.0    1.2  1  Lyase_1   Lyase
    5.5e-14   52.5   0.0      2e-13   50.7   0.0    2.0  1  ADSL_C    Adenylosuccinate lyase C-terminus


Domain annotation for each model (and alignments):
>> Lyase_1  Lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.3   0.0   4.5e-27     4e-23      33     304 ..     124     386 ..      97     391 .. 0.80

  Alignments for each domain:
  == domain 1  score: 82.3 bits;  conditional E-value: 4.5e-27
                 HHHHHHHHHTTSSTHHHHHHHHHHHHHHHCHCHHCGGHHHBSSSSSHHHHHHHHHHHHHHHHTTHSSGIIIIITTT--HHHHHHHHHHHHHHHHHHHTH CS
     Lyase_1  33 aalkkaaakanvdlkeeaaaiikaldevleegklddqfvlkviqegsgtavnmnlnevigellgekvepndkvhtgqSsnDqvpTalrlalkkalsekL 131
                   l++a  +++++   + +++ik ++e+++ + ++  ++++ ++e+      m+     g +     ++++ +h g++s  + + a  ++l++ l + L
  KHJ35091.1 124 LWLAEAEKQLGLS---ITEEAIKQMSENVN-VTEQ-DLEIAASEEKVRRHDVMAHVHAFG-K--VAPKAAGIIHLGATSCFVTDNADLIFLRDGL-DLL 213
                 4455555555555...58888899999999.7777.678887777776555554444445.2..447999**********99999999*******.88* PP

                 HHHHHHHHHHHHHHHHHTTT-EEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTCEETTTTTTTSSTTTSCCTH.HHHHHHHHH..HHHC CS
     Lyase_1 132 lpaleqLidalkekakefkdvvkiGrThlqdAtPvtlgqelsayaealerdrerlkellkrllvellgggtavgtglnadpef.aelvakela..kvtg 227
                 lp+l  +i+ l++ a  +kd + +G+Th q+A+ +t g   + +++ l +d+e ++++++ l+   ++g t++ + +     f +    +el+    ++
  KHJ35091.1 214 LPKLAIIIKKLSNFAIRYKDMPTLGYTHYQPAQLITVGRRAAQWVQDLVMDLEDIEKVREDLRFRGAQGTTGTQASF--LELFkDGSKTDELNdlLCKK 310
                 *********************************************************************77666554..33220345566666222344 PP

                 ST.EESSSHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTSSEEEEGCCTSSC-TTSTTTEBTHHHHHHH CS
     Lyase_1 228 lp.vkapnsfeavsdrDavvellgalkllatsLskfaeDlrllssgeaglvelslaesepGSSiMPgKvNPvqlEllt 304
                  + +k+  + +++ +r   + ++ al+ + +   k++ D+r l++    ++e+ + ++++GSS M  K+NP  +E + 
  KHJ35091.1 311 AGfSKCYSISTQTYTRKVDLRVANALSAFGATAQKIGSDIRHLAA--QKEIEEPFEKGQIGSSAMAYKRNPMRCERIC 386
                 5556678888899999999999***********************..99**************************875 PP

>> ADSL_C  Adenylosuccinate lyase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.0   2.2e-17     2e-13       1      72 [.     459     540 ..     459     541 .. 0.95

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 2.2e-17
                 TGGGHHHHHHHHH.HTH-HHHHHHHHHHHHHHHHHC.........HHHHHHT-HHHHCHHCHHHHHT-GGGCCTTHHHHHHH CS
      ADSL_C   1 GlifservllaLv.kglgReeAyelVqeaamkawee.........llelLaadpevkkseeeldalfdpayylgsadeivdr 72 
                 +++++e++++++v kg +R+eA+e ++ ++++a +          l+e++++ + +k  + e+d++++ ++++g+++e+v r
  KHJ35091.1 459 PFMATENIIMKMVsKGASRQEAHEEIRILSHQASNVvkteggrndLIERIKNTDYFKPIWPEIDDMLEAKNFIGRCPELVLR 540
                 79***********99*******************99*********************86669****************9865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (569 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.21s 00:00:00.76 Elapsed: 00:00:00.39
# Mc/sec: 4358.73
//
Query:       KHJ35092.1  [L=229]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
        2.4    8.4   8.2        2.7    8.2   3.8    2.4  2  Zn-ribbon_8   Zinc ribbon domain


Domain annotation for each model (and alignments):
>> Zn-ribbon_8  Zinc ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1     0.013   2.4e+02      23      35 ..     125     139 ..     112     144 .. 0.70
   2 ?    8.2   3.8   0.00015       2.7       8      35 ..     150     175 ..     146     178 .. 0.69

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.013
  Zn-ribbon_8  23 daplta.CPeCgs.e 35 
                  + + ++ C++C++ +
   KHJ35092.1 125 KQKAIDfCKRCNGyH 139
                  556788899999854 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00015
  Zn-ribbon_8   8 CeeCghefevlqsisdapltaCPeCgse 35 
                  C +Cg++         ++lt+C++Cg++
   KHJ35092.1 150 CGNCGSVMHTEND--CKALTKCKNCGGP 175
                  9999965554443..335777*****95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (229 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       764  (0.0426125); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.28s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1637.64
//
Query:       KHJ35093.1  [L=541]
Description: putative nucleolar gtp-binding protein 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      7e-23   80.5  15.2    1.5e-22   79.5  15.2    1.6  1  GN3L_Grn1        GNL3L/Grn1 putative GTPase
    2.2e-16   60.0   0.2    3.8e-12   46.3   0.0    2.6  2  MMR_HSR1         50S ribosome-binding GTPase
    1.4e-07   31.6   0.1    8.8e-07   29.0   0.1    2.1  1  RsgA_GTPase      RsgA GTPase
      3e-06   26.9   0.0    8.1e-05   22.2   0.0    2.4  2  FeoB_N           Ferrous iron transport protein B
    0.00017   21.7   6.1      0.089   12.8   0.0    3.9  4  Dynamin_N        Dynamin family
    0.00018   21.1   0.3      0.034   13.7   0.0    2.8  2  GTP_EFTU         Elongation factor Tu GTP binding domain
  ------ inclusion threshold ------
      0.055   12.4   0.2       0.16   10.9   0.2    1.7  1  MeaB             Methylmalonyl Co-A mutase-associated GTPase 
      0.062   13.7   3.7       0.36   11.2   0.0    3.1  2  AAA_16           AAA ATPase domain
      0.074   12.5   0.0       0.39   10.1   0.0    2.1  2  Arf              ADP-ribosylation factor family
      0.097   12.9   0.4         11    6.3   0.0    2.5  2  Roc              Ras of Complex, Roc, domain of DAPkinase
       0.13   10.8   2.8       0.17   10.4   2.8    1.2  1  RRN3             RNA polymerase I specific transcription init
       0.15   12.4   0.2       0.83   10.0   0.0    2.2  2  Nuc_deoxyri_tr2  Nucleoside 2-deoxyribosyltransferase like


Domain annotation for each model (and alignments):
>> GN3L_Grn1  GNL3L/Grn1 putative GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.5  15.2     1e-25   1.5e-22       1      73 [.      18      90 ..      18      93 .. 0.95

  Alignments for each domain:
  == domain 1  score: 79.5 bits;  conditional E-value: 1e-25
                .HHHHHHHHHHHHHHHHHHHTT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
   GN3L_Grn1  1 rkrykiekkvkehnrKerKeakknptwkskkkkdpgIPnsfPfKeeiLeeieekkrkkeeekekkkeakkeek 73
                r+r+kiek +++++rK+rKe+kk ++w+sk kkdpgIPn+fP+K++iL+eiee++rkk ee e++k++ k +k
  KHJ35093.1 18 RLRHKIEKASAAKQRKARKEKKKCSEWQSKLKKDPGIPNLFPYKNRILAEIEEARRKKLEEVERRKAELKLAK 90
                78*****************************************************************977666 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.0   0.0   0.00023      0.34      63     114 .]     189     243 ..     176     243 .. 0.66
   2 !   46.3   0.0   2.5e-15   3.8e-12       2      71 ..     313     385 ..     312     419 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00023
                 HHHHHHHHHHHHC.TSEEEEEEETT......TTCSHHHHHHHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  63 ekglgkaflalee.adlillvvdas......eeklkpldeeleelleeakkplilvlnk 114
                 +k + k f+++ e ad+il+v+da+      +    ++ e++     + +k+lil+lnk
  KHJ35093.1 189 RKAFDKVFKQVVEqADVILYVLDARdpegtrS----KEVERMVMAAASGGKRLILILNK 243
                 446677888877769********997643221....22233333333478999999998 PP

  == domain 2  score: 46.3 bits;  conditional E-value: 2.5e-15
                 EEEEESTTSSHHHHHHHHHTS......TEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCS....SHHHHHHHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge......kaivsdkpgtTrdinegrvklkgkeielvDtpGli....egaseekglgkafl 71 
                 v+++G+pNvGKS++in+lt +      ++ v++++g+T+  +  +++   ++++l+D pG++    e    ++g + + +
  KHJ35093.1 313 VGVIGYPNVGKSSVINTLTTRlggsgvACPVGAEAGVTTSLRLVKLD---SKLKLLDSPGIVfpcsE----NEGKSSSKQ 385
                 99****************96333346567***************997...79********7654431....222222222 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.1   5.9e-10   8.8e-07      13     161 ..     200     370 ..     188     373 .. 0.79

  Alignments for each domain:
  == domain 1  score: 29.0 bits;  conditional E-value: 5.9e-10
                  EES--EEEEEEESTTTT.--HHHHHHHHHHHHHTT-EEEEEEE-GGG--HHH.................HHHHHHHHHHHTTSEEEE--TTTHTTHHH CS
  RsgA_GTPase  13 vaNvdqllivvslkepe.lslnlldrfLvlaeekgiepvivlnKiDlleeee.................eleelkeelealgyevllvsaktkeglee 92 
                  v   d +l v+ + +pe ++++ ++r++++a + g +++++lnKiDl+                     ++++ + + ++++ + l+++a++ + +++
   KHJ35093.1 200 VEQADVILYVLDARDPEgTRSKEVERMVMAAASGGKRLILILNKIDLIPPGVlrdwliylrryfptiplRASTPAPNSRTFDHNQLTIKATSATLFKA 297
                  55667777777777776367899**************************999999***********99988888888899999999999988888888 PP

                  HHHHCTT...S...EEEEECSTTSSHHHHHHHHCTT-----S--------------SEEEEEETTTEEEESS-SS CS
  RsgA_GTPase  93 lkellkd...k...tsvlvGqSGvGKStLinallpelelktgevseklgrGkhTTtavellelaegglliDtPGf 161
                  lk+  ++   k   t+ ++G   vGKS++in+l+ +l    + v    g     Tt+ +l++l+++  l D+PG+
   KHJ35093.1 298 LKSFASSknlKrfiTVGVIGYPNVGKSSVINTLTTRLG--GSGVACPVGAEAGVTTSLRLVKLDSKLKLLDSPGI 370
                  87654442122111444778888***********9955..55555555555557999*****************8 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.096   1.4e+02      77     117 ..     201     246 ..     188     249 .. 0.70
   2 !   22.2   0.0   5.4e-08   8.1e-05       2      76 ..     312     395 ..     311     408 .. 0.76

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.096
                 TSSSEEEEEEEGGGHH....HHH.HHHHHHHHTTSSEEEEEETHHH CS
      FeoB_N  77 eepdvvvnvvdatnle....rnL.yLtlqllelgvpvvlalnmide 117
                 e++dv++ v+da   e    +++  +++  +  g++++l+ln+id 
  KHJ35093.1 201 EQADVILYVLDARDPEgtrsKEVeRMVMAAASGGKRLILILNKIDL 246
                 7899*******99876221122224666666778899999999986 PP

  == domain 2  score: 22.2 bits;  conditional E-value: 5.4e-08
                 EEEEEESTTSSHHHHHHHHH......TTSEEEEESTTSSSEEEEEEEEETTEEEEEEE----.SSS.....SSSSHHHHHHHHHHHC CS
      FeoB_N   2 tvalvGnpnvGkttlfnalt......gakqkvgNwpGvtvekkegklklkgkeveivDlPGi.Ysl.....sayseeekvardflle 76 
                 tv ++G pnvGk++++n+lt      g+   vg  +Gvt   + +kl+   ++++++D PGi +       ++ s++e  ar +ll+
  KHJ35093.1 312 TVGVIGYPNVGKSSVINTLTtrlggsGVACPVGAEAGVTTSLRLVKLD---SKLKLLDSPGIvFPCsenegKSSSKQEDQARLILLN 395
                 7899***************855555567889********999999988...99********93322334444555666666655555 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   1.2       2.9   4.3e+03      96      96 ..      69      69 ..      13     143 .. 0.58
   2 !   12.8   0.0     6e-05     0.089     120     168 .]     194     244 ..     169     244 .. 0.81
   3 !    8.2   0.0    0.0016       2.3       1      19 [.     313     331 ..     313     334 .. 0.90
   4 ?    1.2   0.0      0.23   3.4e+02      98     113 ..     357     372 ..     345     437 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.9
                E CS
   Dynamin_N 96 l 96
                 
  KHJ35093.1 69 E 69
                1 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 6e-05
                 HHHHHHHSTTEEEEEEEETTS.-CCC-.CHHHHHHHHSTTBTTEEEEEE-C CS
   Dynamin_N 120 elvkeyikkadiilavtsanh.dlsns.ealflarevdpkgkrtivvltkl 168
                 ++ k+ +++ad+il+v++a   + ++s e++++  ++ + gkr i +l+k+
  KHJ35093.1 194 KVFKQVVEQADVILYVLDARDpEGTRSkEVERMVMAAASGGKRLILILNKI 244
                 6666777************9954555569********************95 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0016
                 EEEEEBTTTTHHHHHHHHH CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLl 19 
                 + v+G  + GKSSv+n L+
  KHJ35093.1 313 VGVIGYPNVGKSSVINTLT 331
                 689*************997 PP

  == domain 4  score: 1.2 bits;  conditional E-value: 0.23
                 TTS-SEEEEE---B-S CS
   Dynamin_N  98 llvkgltlvDlPGlds 113
                  l+++l+l+D+PG+  
  KHJ35093.1 357 KLDSKLKLLDSPGIVF 372
                 567899*******975 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.0   2.3e-05     0.034      83     135 ..     192     247 ..     103     262 .. 0.84
   2 ?    4.9   0.0     0.012        17       2      29 ..     309     336 ..     308     371 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.3e-05
                 GHHHHHHHHHT-SEEEEEEETT..TB.STHHHHHHHHHHHHTTTEEEEEEESCGST CS
    GTP_EFTU  83 FskevirglrvlDgavlvvdav..eG.vepqteevlrlalkegvpiivfiNKmDrl 135
                 F k   + ++++D+ + v+da+  eG      e+++  a + g ++i+++NK+D +
  KHJ35093.1 192 FDKVFKQVVEQADVILYVLDARdpEGtRSKEVERMVMAAASGGKRLILILNKIDLI 247
                 7777788899************55553444555566666666777*********87 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.012
                 CEEEEEEEESTTSSHHHHHHHHHHHTTS CS
    GTP_EFTU   2 rirnigiighvDhGKtTLtdrLlyktga 29 
                 r +++g+ig  + GK++++ +L++++g 
  KHJ35093.1 309 RFITVGVIGYPNVGKSSVINTLTTRLGG 336
                 6789******************998875 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.2   0.00011      0.16      28      57 ..     309     338 ..     286     345 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00011
                 -SEEEEEEE-TTSSHHHHHHHHHHHHHCTT CS
        MeaB  28 raqvvGltGvPGaGkstlvealglelrrrG 57 
                 r   vG+ G P +Gks +++ l+++l   G
  KHJ35093.1 309 RFITVGVIGYPNVGKSSVINTLTTRLGGSG 338
                 55689*******************998776 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   2.0      0.47     7e+02     131     131 ..      94      94 ..      10     261 .. 0.55
   2 ?   11.2   0.0   0.00024      0.36      26      55 ..     312     341 ..     288     419 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.47
      AAA_16 131 s 131
                 +
  KHJ35093.1  94 K 94 
                 0 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.00024
      AAA_16  26 lvllsGesGvGKsslvrellralekdggif 55 
                  v ++G++ vGKss++++l ++l ++g+ +
  KHJ35093.1 312 TVGVIGYPNVGKSSVINTLTTRLGGSGVAC 341
                 57799*******************997766 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0   0.00026      0.39      67     127 ..     188     246 ..     179     250 .. 0.86
   2 ?   -1.3   0.0      0.85   1.3e+03       6      35 ..     302     331 ..     296     334 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00026
                 SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHHHHHHHHHCTSGCCTTSEEEEEEE-TTS CS
         Arf  67 GqeklRplWknYfektdavifvvDsadreRleeakeeLkalleeeelkevallvlaNKqDl 127
                  ++   +++k+  e+ d++++v+D+ d e   + ++e+++++         l+++ NK+Dl
  KHJ35093.1 188 SRKAFDKVFKQVVEQADVILYVLDARDPEG--TRSKEVERMVMAAASGGKRLILILNKIDL 246
                 5566678899999**************996..55689999999999999999999*****8 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 0.85
                 HGGTT.TTEEEEEEEESTTSSHHHHHHHHH CS
         Arf   6 aklklkkkelrilllGLDnaGKtTilkklk 35 
                 a+ k+ k+ + + ++G  n GK+ +++ l+
  KHJ35093.1 302 ASSKNLKRFITVGVIGYPNVGKSSVINTLT 331
                 44555566777778999********99986 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0    0.0073        11      55     120 .]     178     246 ..     144     246 .. 0.70
   2 ?    4.2   0.1     0.031        46       3      21 ..     314     332 ..     312     363 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.0073
                 CEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEEGHHH..HCHHHHHHHHHHH.CSSS-EEEEEE-TTT CS
         Roc  55 kvklniWDtaGqerfrslhplylreaalailvydsrss..enlkeWlkelkkv.agkspvilvgnkiDl 120
                 + +l++   +  + f+++ +  +++a+++++v+d+r+   ++ ke  + + +  +g + +il+ nkiDl
  KHJ35093.1 178 SSNLHLQTEGSRKAFDKVFKQVVEQADVILYVLDARDPegTRSKEVERMVMAAaSGGKRLILILNKIDL 246
                 45566655666788999999999***********886512344454555544414567999******95 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.031
                 EEESSTTSSHHHHHHCHCT CS
         Roc   3 vlvGdsgvGKtsllkrfve 21 
                  ++G  +vGK+s ++ +++
  KHJ35093.1 314 GVIGYPNVGKSSVINTLTT 332
                 589***********99876 PP

>> RRN3  RNA polymerase I specific transcription initiation factor RRN3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.8   0.00011      0.17     228     295 ..     118     205 ..      94     302 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00011
        RRN3 228 leeelee.......................deddedddeddeesdlddlssdeeaeedee.kdeeeeslkkikelvekLDailtllfehlek 295
                 + ++ +                        + d e+d + ++e d dd+ssd  +e++++ +++      +++   +  D++ + ++e  + 
  KHJ35093.1 118 NITDDKMveedideeenpmaallasaraaaK-DYEQDIDSEDEMDEDDVSSDGYDEDEDDvSSN---LHLQTEGSRKAFDKVFKQVVEQADV 205
                 2222111222222233455556666666542.22333333355667777776444444332222...2345555555566666555555443 PP

>> Nuc_deoxyri_tr2  Nucleoside 2-deoxyribosyltransferase like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1         1   1.5e+03      12      55 ..      38      75 ..      34      90 .. 0.68
   2 ?   10.0   0.0   0.00055      0.83      65     104 ..     197     240 ..     146     244 .. 0.77

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1
                     SSSST-HHHHHHHHHHTSSS-EEEEE----SS-----HHHHH.. CS
  Nuc_deoxyri_tr2 12 seaetdWredlteaLsaipklgvtvfnPqredwdseleedrskk 55
                     ++++++W+ +l    +  ++ g+  + P+++ + +e+ee r+kk
       KHJ35093.1 38 KKKCSEWQSKL----K--KDPGIPNLFPYKNRILAEIEEARRKK 75
                     67899999999....3..46788888888888888875554433 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.00055
                      HHHHHH-SEEEEEE-TT--.-HHHH.HH.HHHHTTS.S-EEEEE CS
  Nuc_deoxyri_tr2  65 lealekAdvvvfvfdgeds.atrsl.vE.lglaaak.gkkvvlv 104
                       +  e+Adv+++v+d +d  +trs  vE + +aaa+ gk+++l+
       KHJ35093.1 197 KQVVEQADVILYVLDARDPeGTRSKeVErMVMAAASgGKRLILI 240
                      45679***********8876788878763667788888988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (541 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1148  (0.0640303); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.64u 0.30s 00:00:00.94 Elapsed: 00:00:00.44
# Mc/sec: 3714.42
//
Query:       KHJ35094.1  [L=989]
Description: putative mitotic control protein dis3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-98  329.8   0.1    3.4e-98  329.0   0.1    1.4  1  RNB            RNB domain
    4.1e-28   97.2   0.3      1e-27   95.9   0.3    1.8  1  Rrp44_S1       S1 domain
    3.4e-25   88.5   0.1    9.9e-25   87.0   0.1    1.8  1  Rrp44_CSD1     Rrp44-like cold shock domain
    1.4e-19   69.9   0.0      5e-19   68.1   0.0    2.1  1  OB_Dis3        Dis3-like cold-shock domain 2 (CSD2)
    8.8e-12   45.4   0.2    3.5e-11   43.5   0.2    2.1  1  PIN_4          PIN domain
    5.6e-10   39.3   1.8    6.2e-05   23.1   0.0    3.9  4  CSD2           Cold shock domain
     0.0018   18.5   0.0     0.0079   16.5   0.0    2.1  1  Dis3l2_C_term  DIS3-like exonuclease 2 C terminal


Domain annotation for each model (and alignments):
>> RNB  RNB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  329.0   0.1  1.3e-101   3.4e-98       1     324 [.     517     848 ..     517     850 .. 0.96

  Alignments for each domain:
  == domain 1  score: 329.0 bits;  conditional E-value: 1.3e-101
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB   1 RkdlrdllvitIdpedakdlDdAisieklpngnyelgVhIADvshyvkegspldkearkratsvyLpekvvpMLPqelsedlcSLnpgedrlalsvlid 99 
                 Rkd+rdl +++Idp +++d+DdA++ ++lpngn+++gVhIADvsh+vk+ +++d ea +r+t+vyL +k + MLP  l +dlcSL+p+ +r+a+sv+++
  KHJ35094.1 517 RKDFRDLGICSIDPIGCQDIDDALHARPLPNGNIQVGVHIADVSHFVKPRTAMDLEASTRGTTVYLVDKRIDMLPMMLGTDLCSLKPYVERYAFSVIWE 615
                 9************************************************************************************************** PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 100 vdekgevlsveiylsvIkskarltydevqdlleqkdekeekktaedLellyelakalrkkRlkkgalefdspeikllldedkgnrielkveeetkahsl 198
                 ++ + e+l++e+++svIks++ ++y+++q+ +++ ++  +++ + +++ l  l+k++++kR + gal+++spe++++ ++++  +i++k++++ +  sl
  KHJ35094.1 616 ISPEAEILNTEFTKSVIKSREAFSYEDAQARIDNRQQ--QDDLTISMRILLLLSKKFKQKRMEAGALSLSSPEVRVQTESETSDPIDIKTKKHLDTMSL 712
                 ********************************77766..5689999***************************************************** PP

                 xxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxx.. RF
         RNB 199 veelmllANelvArfl.seleipailriheepsnekledliklakklglk.lednsskknlqeslekleeee...aeqllselllrllkeakyssep.. 290
                 vee+mllAN+ vA ++ + ++++a+lr+h  p ++++e+l++ +k +    l ++ssk +l +sl+++ + +    ++l++ l +r++ +a+y++    
  KHJ35094.1 713 VEEFMLLANTSVAAKIyQSFPQTAMLRRHGTPPESNFEELANQLKVMRGLkLCYSSSK-ELANSLDACIDPQepfFNTLIRILATRCMLSAEYFCAGtq 810
                 ****************9***********************999996654425555555.**********9999999******************99999 PP

                 ....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         RNB 291 ....vgHfgLaleeYthfTSPirRYpDlvvhrllkall 324
                     ++H+gLa e+YthfTSPirRY+Dl+vhr+l a++
  KHJ35094.1 811 aypeFRHYGLASEIYTHFTSPIRRYADLIVHRQLAAAI 848
                 999*******************************9987 PP

>> Rrp44_S1  S1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.9   0.3   4.1e-31     1e-27       1      88 [.     898     980 ..     898     981 .. 0.93

  Alignments for each domain:
  == domain 1  score: 95.9 bits;  conditional E-value: 4.1e-31
                 SEEEEEEEEEESSEEEEEETTTTEEEEEEHHHCBS-GGG..-EEETTTTEEEEBBTTSSS-EEEETTSEEEEEEEEEE-SSSSSEEEE CS
    Rrp44_S1   1 veeegyvikvfsNGvvvlvprfGiEglirledlaeeeeskeaefdeeeykleveekkkekkvtvelFdkvkVkvksekdestgkrkvk 88 
                 veeeg+v+k+fsNG+vv+vprfGiE+lirl+dla+   ++ea fd+++y+l+++ +++   ++v lF kv Vk+++ k+e +gkrkv+
  KHJ35094.1 898 VEEEGFVMKIFSNGFVVFVPRFGIESLIRLRDLADI--EPEAIFDAQNYTLQLSGSRE---LQVGLFYKVVVKLSDFKEEGSGKRKVR 980
                 589******************************744..457*************9965...9************************97 PP

>> Rrp44_CSD1  Rrp44-like cold shock domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.0   0.1   3.9e-28   9.9e-25       4     101 ..     253     350 ..     250     389 .. 0.84

  Alignments for each domain:
  == domain 1  score: 87.0 bits;  conditional E-value: 3.9e-28
                 ------HHHHHHHHHTTSEEEEEEEEESSBTTEEEEE-SSSSS-EEEESHHHHTS--TT-EEEEEE--GGG-B---SS-B-CCCSSTT--TT-B--SS CS
  Rrp44_CSD1   4 fpeyystarvmgglkngvlyqgniqiseynflegsvslprfskpvlivgqknlnrafngdqvivellpqsewkapssivldsehfdvndnpdieagdd 101
                 + +y+s ++++ g+kng l+qg  ++s yn+legs+    f k ++i+g+ n+nra++gd v+vellp+  wk ps+ +++ e ++  +n d e g+ 
  KHJ35094.1 253 YRQYFSHSKMITGIKNGTLHQGIFNVSPYNYLEGSIHTSAFDKSLIILGRENINRAIQGDMVVVELLPKDHWKRPSTKIIEDETINKYENADAEDGEA 350
                 678***************************************************************************************99998864 PP

>> OB_Dis3  Dis3-like cold-shock domain 2 (CSD2)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.1   0.0     2e-22     5e-19       2      77 .]     415     482 ..     414     482 .. 0.98

  Alignments for each domain:
  == domain 1  score: 68.1 bits;  conditional E-value: 2e-22
                 EEE--SSTTS--EEEETTSSTTTHHHHTTTTTT--EEEEE----TT-SS-EEEEEEE-HHHHHHHHHHHHHHHHTT CS
     OB_Dis3   2 vlfkPldkrlPriliptkelpeeflenpeelegklfvvkidsWsetsryPlGeivksLGeagdieaeteaiLleng 77 
                 v+++P+dkr+P+i+ +t+++         e+ gk+++v+id+W+ +sryP G++v+sLG  ++  aetea+Lle++
  KHJ35094.1 415 VFLIPMDKRIPKIRLRTRQA--------GEIIGKRVLVTIDAWERNSRYPVGHFVRSLGGLETKGAETEALLLEYD 482
                 89******************........**********************************************96 PP

>> PIN_4  PIN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.5   0.2   1.4e-14   3.5e-11       2     130 ..      88     218 ..      87     219 .. 0.82

  Alignments for each domain:
  == domain 1  score: 43.5 bits;  conditional E-value: 1.4e-14
       PIN_4   2 VlDTnvlLhdpealksfkeehdvviPitVleELdklKkgsserelarlarqanrlldellekesgrlkvqtsaeelpeeeseseknDnrIlavalelke 100
                 V DTn lL+ ++++++ +  +dv+i +tV+eE+++      +r ++   ++ +r+    +++   +  v++++ e  +   +  +nD++I +++ +++ 
  KHJ35094.1  88 VPDTNALLNGLDLFETTNAFNDVIILQTVIEEIRNRSLPLYNRLIGLTKSEEKRFY-VFFNEFRLETYVRRDQGESIN---D--RNDRAIRRAVQWYAD 180
                 99*******************************98888887566666666666655.455554555555555444443...4..9************** PP

       PIN_4 101 ekp........drkvvLvskDinlrikAkalgieaedy 130
                 + +          +vv++s+D+++ +kAk+ +i+a ++
  KHJ35094.1 181 HLKqaakgmakVPSVVMLSDDKENLMKAKTDQIDATSL 218
                 *********99999********************9875 PP

>> CSD2  Cold shock domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   0.0   0.00027      0.68      13      48 ..     298     333 ..     291     334 .. 0.85
   2 ?    4.3   0.4     0.017        45       8      50 ..     330     386 ..     327     390 .. 0.82
   3 !   23.1   0.0   2.4e-08   6.2e-05       1      71 [.     416     485 ..     416     486 .. 0.86
   4 ?   -4.3   0.0         7   1.8e+04      28      38 ..     961     971 ..     961     977 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00027
        CSD2  13 ifipkeklkgakdGdkVvveiteypdkknpeGevie 48 
                 i++ +e+++ a +Gd+Vvve++  +  k+p  ++ie
  KHJ35094.1 298 IILGRENINRAIQGDMVVVELLPKDHWKRPSTKIIE 333
                 6777999**************987655779999997 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.017
        CSD2   8 rlkqdifipkeklkgakdGdkVvve............iteypdk.kn.peGevievL 50 
                 ++ +d  i k ++ +a+dG+ Vv e            i+++ ++ +  p+++v+ vL
  KHJ35094.1 330 KIIEDETINKYENADAEDGEAVVTErerkalylqvknIHSQSSEgRPqPTARVVGVL 386
                 66677889999999***********99999999998888876443545999999998 PP

  == domain 3  score: 23.1 bits;  conditional E-value: 2.4e-08
        CSD2   1 FVvpddkrlkqdifipkeklkgakdGdkVvveiteypdk.knpeGevievLGkkgdpgveilsilakhglpe 71 
                 F++p dkr+++ i +  +   g   G+ V+v i  ++ + + p+G+ +++LG  +++g+e ++ l ++++++
  KHJ35094.1 416 FLIPMDKRIPK-IRLRTR-QAGEIIGKRVLVTIDAWERNsRYPVGHFVRSLGGLETKGAETEALLLEYDVQY 485
                 99********6.777755.445778***********854266**************************9986 PP

  == domain 4  score: -4.3 bits;  conditional E-value: 7
        CSD2  28 kVvveiteypd 38 
                 kVvv++ ++++
  KHJ35094.1 961 KVVVKLSDFKE 971
                 89***999875 PP

>> Dis3l2_C_term  DIS3-like exonuclease 2 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   3.1e-06    0.0079       3      51 ..     898     949 ..     897     977 .. 0.86

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 3.1e-06
  Dis3l2_C_term   3 leekavVvnVldssfDVlileyGlekRVyldklp.lk.efefdk.tkvLtLy 51 
                    +ee++ V+++ ++ f V+++++G+e  + l +l  ++ e+ fd  + +L+L 
     KHJ35094.1 898 VEEEGFVMKIFSNGFVVFVPRFGIESLIRLRDLAdIEpEAIFDAqNYTLQLS 949
                    799******************************9887788999536667775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (989 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       601  (0.0335211); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.43
# Mc/sec: 6959.98
//
Query:       KHJ35095.1  [L=494]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       898  (0.0500865); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.40
# Mc/sec: 3660.81
//
Query:       KHJ35096.1  [L=360]
Description: putative pantoate-beta-alanine ligase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-92  309.4   0.0      2e-92  309.2   0.0    1.0  1  Pantoate_ligase  Pantoate-beta-alanine ligase


Domain annotation for each model (and alignments):
>> Pantoate_ligase  Pantoate-beta-alanine ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  309.2   0.0   1.1e-96     2e-92       1     266 []      28     354 ..      28     354 .. 0.88

  Alignments for each domain:
  == domain 1  score: 309.2 bits;  conditional E-value: 1.1e-96
                      EEEESHHHHHHHHHHHHHTT-EEEEEEE-SS-GHHHHHHHHHHHHHSSEEEEEEEEEGGGSSTTSCTTTSEEEHHHHHHHHHHTT-S....... CS
  Pantoate_ligase   1 kiiktvaelrellkelrkegkkvglVpTmGaLHeGHlsLvkaakeendvvvvSiFvNplqFgpkedlekYPrtleaDlelleeagvd....... 87 
                      ki+++++++r++ +++  ++++vglVpTmGaLHeGHlsL++ a+++n  vvvSi+vNp qFg +edl++YP+t+++D++ll++++ d       
       KHJ35096.1  28 KIFSRIQSFRQWRRRQIFDHRSVGLVPTMGALHEGHLSLIRLAARKNAAVVVSIYVNPSQFGVSEDLDSYPQTFDKDIQLLRDLDNDlacdgsn 121
                      58999*******7776666778*************************************************************999999***** PP

                      .....EEE---HHHHST............EEEEECSGGCSTHHHHSTTHHHHHHHHHHHHHHHHT-SEEEEEGGGHHHHHHHHHHHHHTT-SSE CS
  Pantoate_ligase  88 .....lvFaPsveemyp............ttvevkelsevlegasrpghFrGVatvvtkLfnivqpdrayfGqKDaqqlavirrlvkdlnlpve 164
                           +vFaP+++emyp              v++k l+e leg+srp++FrGVat++tkLfniv+pd+ayfGqKD+qq+++i++++kd+ +++e
       KHJ35096.1 122 fgkiaAVFAPTTSEMYPdncfsqeiggngSFVNIKPLDELLEGTSRPTFFRGVATICTKLFNIVTPDTAYFGQKDIQQTIIIKKMIKDFCIDTE 215
                      ****************99999999****989999************************************************************ PP

                      EEEEEEEBETTSEBTTGGGGGS-HHHHHHTTHHHHHHHHHH........BHHHHH..............HHHHHHHHTHTTEEE..EEEEEEET CS
  Pantoate_ligase 165 ivavpivReedgLAlSSRNkyLseeerkaAlvlykaLkaak........eaealk..............eaakeeleeeeleka..dyveivda 234
                      +++ ++ Re+dgLAlSSRN+yL +++r+ A+vl k+L+ ++             +              ++ +++l e +++    dy++++d+
       KHJ35096.1 216 VIVGETQRESDGLALSSRNQYLGTRRRQVATVLIKSLRLIEeeylkgnrM----RdsllqpalnfirtiKDEQDRLGEVGVQ-FllDYISLADP 304
                      *****************************************666655540....1444444444443323334445555555.146******** PP

                      TTSS...BSSB.SEEEEEEEEEET.................TEEEEEEEE CS
  Pantoate_ligase 235 etleel.eleeekkavllvaakvg.................kvrLiDnii 266
                      +tlee+ e++e+k+a+++ a+k+                   vrLiDnii
       KHJ35096.1 305 QTLEEVgEVNEDKGAIISGAIKMLpldnpspneylgqangpMVRLIDNII 354
                      *****976666699*********4455566667777788889******95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (360 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       286  (0.0159518); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.43
# Mc/sec: 2530.20
//
Query:       KHJ35097.1  [L=821]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.57   10.9   0.0       0.57   10.9   0.0    3.2  3  zf-RVT       zinc-binding in reverse transcriptase


Domain annotation for each model (and alignments):
>> zf-RVT  zinc-binding in reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   2.4      0.15   2.7e+03      12      46 ..      45      79 ..      37      90 .. 0.65
   2 ?   10.9   0.0   3.2e-05      0.57      42      81 ..     145     185 ..     116     188 .. 0.80
   3 ?   -7.0   5.2         1   1.8e+04      53      76 ..     704     729 ..     690     734 .. 0.60

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 0.15
      zf-RVT 12 ekkekvklakliWkskappkvkfflWlllknrlpt 46
                 +k++ + +++iW  k   + + ++ +++  +++ 
  KHJ35097.1 45 VRKKDREDWRKIWFGKDSQRKQKLAMKMAAYKCWQ 79
                33344577999**8888666666666666666654 PP

  == domain 2  score: 10.9 bits;  conditional E-value: 3.2e-05
      zf-RVT  42 nrlptadnllkrgies.ssrCqlCgqeeEtieHlfleCpfa 81 
                 +++  +  l +r+++  +s  + Cg   E+++H++++Cp+ 
  KHJ35097.1 145 EHIGLNAYLYRRKVPGvKSPKCRCGYPSENVKHVVMACPLK 185
                 556667778899999654455589999***********986 PP

  == domain 3  score: -7.0 bits;  conditional E-value: 1
      zf-RVT  53 rgiesssrCqlCgqe..eEtieHlfl 76 
                 r+ +  + C  Cg    +E+  +++ 
  KHJ35097.1 704 RNCSRAPFCGNCGSVmhTENDCKALT 729
                 45555566666665433444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (821 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1179  (0.0657594); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.71u 0.26s 00:00:00.97 Elapsed: 00:00:00.45
# Mc/sec: 5425.23
//
Query:       KHJ35098.1  [L=362]
Description: putative 3 (2) -bisphosphate nucleotidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-51  174.0   0.3    1.4e-50  172.4   0.3    1.6  1  Inositol_P  Inositol monophosphatase family


Domain annotation for each model (and alignments):
>> Inositol_P  Inositol monophosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.4   0.3   7.6e-55   1.4e-50       7     270 ..      20     358 ..      14     360 .. 0.84

  Alignments for each domain:
  == domain 1  score: 172.4 bits;  conditional E-value: 7.6e-55
                 HHHHHHHHHHHHHHHHHTTTSEEEESTTTCCHHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEHHCHHHHCC............................ CS
  Inositol_P   7 kaavelaakagevlreefsenelvieekskegeedlvtaadeaveelilealaekfpshkilgeetlakge............................ 77 
                 + av+ a+++ ++++ee ++  ++        +e +vt  d  +++li +a++ +fp+++i+ ee+ ++ +                            
  KHJ35098.1  20 QLAVQYATILTKKVFEETEKGTVTK------DDESPVTIGDFGAQALISHAIKFNFPEDEIMAEEEANALKsnsklanlvwekvknsnladpdaqatlg 112
                 5556666666666666665222222......3567*********************************9999*************************** PP

                 ................CT.SSSSSEEEEEEEEETHHHHHHT-SG-EEEEEEEETTEEEEEEEEET.T.....................TTEEECEETTT CS
  Inositol_P  78 ................kseltedgltwivDPiDGTknFvrgipqvaVsigllvegkpvlGviaqP.l.....................lgqlysaakgk 138
                                 +s++ ++g++w++DPiDGTk+F+rg  q+aV+++l+v+g++ +Gv+++P l                     +g l+sa +g+
  KHJ35098.1 113 gqiksvndmleaiaigNSNGHRKGRVWVLDPIDGTKGFLRG-GQYAVCLALIVDGQVKVGVLGCPnLkfintestindstpsqtsnreKGILLSAIEGQ 210
                 *****************************************.9**********************63779**************9999999******** PP

                 EEEETC.........EEEEECTTSEGGGTEEEEEESSSSSSHHHHCHHHHHHHCCCCCH...............EEEBESSHHHHHHHHHHTSTSEEEE CS
  Inositol_P 139 Gaflng.........eklplsrappiseallvtlfavssrkdtseasllekvesavsae...............gvrsvgssalklaavaeGkadayle 213
                 Ga +             +                 ++++ kd+s+a+++e+ve+ +s +               ++r+  +s++k+a +a G ad+y++
  KHJ35098.1 211 GAICRVlgeggltrsSSI-----------------RMRTLKDFSKAIFCESVEANHSSHidqgkiavelginepSIRM--DSQAKYASLALGMADIYMR 290
                 **8877333333333223.................4556666666666666666666666666666666555435555..******************* PP

                 EC......EBHHHHHHHHHHHHHTTEEEEESSSC......SSSTTSSEEEEESCHHHHHHHHHHHCCH CS
  Inositol_P 214 fg.....rekkWDhAAGeaileeaGGvvtdakge......grlllargiiaanqkelaellaaavees 270
                        +ek+WDhAAG +i++eaGG+v d+ g+      gr+l+++++i+a+++ ++++++  v+++
  KHJ35098.1 291 LCvntsyQEKIWDHAAGDIIVREAGGEVSDYLGNrldfgqGRTLAKSKGIIASSRDIHQKVIDIVQKV 358
                 *77889**********************************99998877777777******99999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2667.56
//
Query:       KHJ35099.1  [L=120]
Description: putative vesicle membrane receptor protein (v-snare) [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.5e-33  112.9   0.5    5.1e-33  112.7   0.5    1.0  1  Synaptobrevin  Synaptobrevin
  ------ inclusion threshold ------
      0.052   13.6   0.0      0.066   13.3   0.0    1.0  1  MCU            Mitochondrial calcium uniporter
        0.1   13.2   0.0       0.17   12.5   0.0    1.4  1  AKNA           AT-hook-containing transcription factor


Domain annotation for each model (and alignments):
>> Synaptobrevin  Synaptobrevin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.7   0.5   8.5e-37   5.1e-33       2      87 ..      29     114 ..      28     116 .. 0.97

  Alignments for each domain:
  == domain 1  score: 112.7 bits;  conditional E-value: 8.5e-37
                    XXHHHHHHHHHHCCCCHHCCHHHHCHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHTXXXXXXXXXXXXXXXXXXXXXX CS
  Synaptobrevin   2 ndklakikaevdevkdimkeNidkvlergekldeLvdktenLqssaqqFkkqarklkrkmwwknmkliiililvvlililiiiivi 87 
                    n+++a+++a++d+++++m+eNi+kv +rge+ld L+dkt+nL+ saq F++ a++++++mwwk+mk++++l++ ++il++iii++ 
     KHJ35099.1  29 NQRTAALQAQIDDTVGVMRENINKVSQRGERLDALQDKTDNLAVSAQGFRRGANRVRKQMWWKDMKMRMCLFGGIVILLIIIIVPT 114
                    78999*****************************************************************************9975 PP

>> MCU  Mitochondrial calcium uniporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.1e-05     0.066      35     107 ..      32     104 ..      23     107 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.1e-05
                 XXXXXXXXX-SSSSSSTSSSSSHHHHHHHHHHHHH-SHHHHHHHHTCCCGGGCHHHHGGGHHHHHHHHTHHHH CS
         MCU  35 vkqlvkalesalnveeeqlkkereleekleelreelepleekkeeidekAerrtrrllwagLallavqlgila 107
                 + +l +++ +++ v +e+ +k+++  e+l++l+++ ++l    + +++ A+r +++++w  + + ++ +g ++
  KHJ35099.1  32 TAALQAQIDDTVGVMRENINKVSQRGERLDALQDKTDNLAVSAQGFRRGANRVRKQMWWKDMKMRMCLFGGIV 104
                 556667788888999999*******************************************999888888765 PP

>> AKNA  AT-hook-containing transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   2.9e-05      0.17      45      73 ..      50      78 ..      30      89 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.9e-05
        AKNA 45 eaeIyqlgqrleeLkdqtdqlkqkveefs 73
                  +++q g+rl+ L+d+td+l    + f+
  KHJ35099.1 50 INKVSQRGERLDALQDKTDNLAVSAQGFR 78
                5799****************988888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (120 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       921  (0.0513693); expected 358.6 (0.02)
Passed bias filter:                      637  (0.035529); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 890.05
//
Query:       KHJ35100.1  [L=885]
Description: putative n-acetyl-gamma-glutamyl-phosphate reductase acetylglutamate kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      7e-46  156.0   0.7    2.5e-45  154.2   0.5    1.9  2  NAT             NAT, N-acetyltransferase, of N-acetylglutamat
    4.7e-31  108.2   0.0    7.1e-31  107.6   0.0    1.2  1  AA_kinase       Amino acid kinase family
    6.8e-31  107.2   0.0    2.1e-30  105.6   0.0    1.9  1  Semialdhyde_dh  Semialdehyde dehydrogenase, NAD binding domai
  ------ inclusion threshold ------
      0.059   13.5   0.0       0.16   12.1   0.0    1.7  1  DapB_N          Dihydrodipicolinate reductase, N-terminus
       0.14   12.1   0.0       0.33   10.9   0.0    1.6  1  DUF3361         Domain of unknown function (DUF3361)


Domain annotation for each model (and alignments):
>> NAT  NAT, N-acetyltransferase, of N-acetylglutamate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       0.5   1.8e+03      46      79 ..      69      98 ..      38     124 .. 0.66
   2 !  154.2   0.5   6.9e-49   2.5e-45       1     161 [.     320     481 ..     320     487 .. 0.94

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.5
                TTSSXHHHHHHHHHTSXEEEEEETTXSEEEEE.. CS
         NAT 46 krkldvkdYldrlkgkiakiyiaedyeglAivtw 79
                ++ ++  +Y+++++++++ ++      g Ai+t+
  KHJ35100.1 69 REVQQYLSYFSSVSSQQFAVIKV----GGAIITE 98
                34455556677777777777754....4566654 PP

  == domain 2  score: 154.2 bits;  conditional E-value: 6.9e-49
                 GHHHHHHSSSTSSEEEE---XEEEESSCCCSSXCCHHHHHHTTST...TTSSXHHHHHHHHHTSXEEEEEETTXSEEEEE.....EXSSSSXEEEEEEE CS
         NAT   1 dlqkelftdsgagtlirrGlkvitvkslkelidlekLksliedsf...krkldvkdYldrlkgkiakiyiaedyeglAivtwedpkeekevayLdkFav 96 
                 dlqkelftd+gagtlirrG k+ t+++++e++d+ekLk+++ ++    + +++++  +++l+++++k+y++e+++ lAiv+    +++ ++ +L  F +
  KHJ35100.1 320 DLQKELFTDTGAGTLIRRGNKIATATNISEFKDIEKLKDVLIRDCeglNVRETADASINSLQNNKFKAYFDEPMNDLAIVLP--GTSDDSISTLIIFKI 416
                 79******************************************9888899*****************************99..4456669******** PP

                 XHHHHHTTHHHHHHHHHHHHXSSEEEEEETTXTTHHHHHHCXSEEEEETTEEEEEESXXXHHHHH CS
         NAT  97 lkssqgsgvsdvvfkalkkdfpkLvWrsrednpvnkWyfersdGslkksqwvlfWyGlkdlkeve 161
                 ++s+++++++d+vf+a+kkd+pkLvW++r+d+++++W+f+++dGs +k+ +v+fWyG++  +e+ 
  KHJ35100.1 417 TRSGWLTNTADNVFAAIKKDHPKLVWKVRQDDENLTWFFDKADGSTSKDDEVFFWYGIETANEII 481
                 *********************************************************87766654 PP

>> AA_kinase  Amino acid kinase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.6   0.0     2e-34   7.1e-31       3     230 ..      87     304 ..      85     316 .. 0.95

  Alignments for each domain:
  == domain 1  score: 107.6 bits;  conditional E-value: 2e-34
                 EEEEE-TTCCCCTCCHHHHHHHHHHHHHHHHTTEEEEEE--HHHHHHHHHHTCCCCCHHHC....E..HHHHHHHHHHHHHHHHHHHHHHHHHTTHGEE CS
   AA_kinase   3 vVvKlGGssltdkeeaslrrlaeqiaalkesgnklvvVhGggsftdgllalksglssgelaaglrstleeagevatrdalaslgerlvaallaaglpav 101
                  V+K+GG+++t  e   l++l   +a l+  g ++vvVhG+g++ ++ll+  +g+++++++ g+r+t+ +++ +a+  + +  + +lv++l + g++a+
  KHJ35100.1  87 AVIKVGGAIIT--EH--LESLTSALAFLNHVGLFPVVVHGAGPQLNKLLED-AGIEPQFEE-GIRVTDSKTLCIAR-KLFLEENLKLVEKLEEMGVHAR 178
                 7**********..44..88999999999999********************.*********.********999998.********************** PP

                 EE-GGGTCEECCCE...HHHTTTCEEECCHHHHHHHTT-EEEEESEEEEETTTEEEEE-HHHHHHHHHHHCTSSEEEEEESSSSCESSTTTTCCTTCEC CS
   AA_kinase 102 glsaaaldateagr.degsdgnvesvdaeaieelleagvvpvltgfigldeegelgrgssDtiaallAealgAdkliiltdVdGVydadpkkvpdarll 199
                 ++++  +da   ++ +++ +g++++v+++ ie  +++g +p+lt ++  + eg+++++++D++a  lA +l++ k+++l++  G+++ d k+     ++
  KHJ35100.1 179 PITSGVFDADYLDKeKYKLVGKITNVNKNPIEAAINSGSLPILTSMA-ETKEGQILNVNADVAAGELARELQPLKVVYLSEKGGLFNEDTKE-----KI 271
                 *********************************************97.99999999********************************9866.....5* PP

                 CEEEHHHCHH..CSSS.TTTHHHHCHHHHHHHH CS
   AA_kinase 200 peisvdeaee..saselatgGmkvkhpaalaaa 230
                 + i+ de  e   ++ + ++G++ k+++a +++
  KHJ35100.1 272 SVINLDEEYEclMSQWWCRYGTRLKIKEAKQLL 304
                 ****************************98877 PP

>> Semialdhyde_dh  Semialdehyde dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.6   0.0   5.9e-34   2.1e-30       1     119 [.     570     693 ..     570     695 .. 0.95

  Alignments for each domain:
  == domain 1  score: 105.6 bits;  conditional E-value: 5.9e-34
                     EEEEETTTSHHHHHHHHHHHCTSSEEEEEEEESTTTTTSBHHHHSGGGTTTECEBEEE.GGGGGCTT-SEEEE-SCHHHHHHHHHHH....HHTT CS
  Semialdhyde_dh   1 kvaivGatGyvGqellrlLeehpevelvvllsssrsaGkklaeavkaleegkdlkved.vdeeelkevdivflalpagvskelapkl....aeag 90 
                     k+a++Ga+Gy+Gq+l+ lL++hp+++l++++s++   Gk+l+ ++k   ++++l+ved + +e+ +evd++++alp+gv+k++ +++     ++g
      KHJ35100.1 570 KIALIGARGYTGQALISLLDTHPNMDLCHVSSREL-SGKELKGYKKRDITYENLTVEDvCRMEQNSEVDCWVMALPNGVCKPFIDTIdrgkTSRG 663
                     79****************************99999.**********************9999*************************88888888 PP

                     SEEEESSSTTTTSTTSEBE-HHH.HGGGGG CS
  Semialdhyde_dh  91 vkviDlssdfRlkddavyvlpev.nreaik 119
                       +iDls+d+R+++ ++y+lpe+ nr++i 
      KHJ35100.1 664 SLIIDLSADHRFDSSWIYGLPELvNRSDIT 693
                     8*********************86898885 PP

>> DapB_N  Dihydrodipicolinate reductase, N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   4.3e-05      0.16       2      45 ..     570     610 ..     569     641 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 4.3e-05
                 EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTCSTTTTTBHH CS
      DapB_N   2 kvavvGasGrmGkevvkaveeaedlelvaavdrkeselegkdag 45 
                 k+a++Ga+G  G+++++++++++++ l  + +r+    +gk++ 
  KHJ35100.1 570 KIALIGARGYTGQALISLLDTHPNMDLCHVSSREL---SGKELK 610
                 89**************************9988865...444443 PP

>> DUF3361  Domain of unknown function (DUF3361)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   9.3e-05      0.33      57     108 ..     200     250 ..     185     259 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 9.3e-05
     DUF3361  57 kiasivnksaadasilqrslaiLesivlnsselyelvekevtlesLiehLqs 108
                 ki ++vnk+  +a i   sl iL s++  ++ +   v+ +v  ++L + Lq 
  KHJ35100.1 200 KI-TNVNKNPIEAAINSGSLPILTSMAETKEGQILNVNADVAAGELARELQP 250
                 44.5699999*************************************99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (885 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       442  (0.0246528); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 6136.12
//
Query:       KHJ35101.1  [L=508]
Description: putative mfs phospholipid transporter git1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.2e-35  121.5  31.3    6.9e-21   74.6  11.5    2.0  2  Sugar_tr        Sugar (and other) transporter
    2.2e-21   76.2  59.0    5.4e-19   68.3  34.6    2.0  2  MFS_1           Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.6  11.5   7.6e-25   6.9e-21       2     193 ..      56     253 ..      55     258 .. 0.88
   2 !   54.5  10.8   9.8e-19   8.7e-15     237     445 ..     262     479 ..     251     486 .. 0.83

  Alignments for each domain:
  == domain 1  score: 74.6 bits;  conditional E-value: 7.6e-25
                 HHHHHHHH.HHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTT CS
    Sugar_tr   2 alvaalgg.llfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgk 99 
                 +++a+ +g +  gY   vig+++t+lk+++   +++s+++k         i +i+++G ++G+l++g+ +d+++Rk slli++v+++i a+l a + g 
  KHJ35101.1  56 TVMACGAGlFSDGYINNVIGSVSTILKTLYGDAYTQSSAQK--------NISAITFAGTVLGQLIFGYTSDKWSRKGSLLISTVILIIFAALGAGSYGI 146
                 677777888999***************88888888888755........59*****************************************9999976 PP

                 .....SS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHH....HHHHHHHHHHHHHHHHHHHHHHH.HTSS-...TTHHHHHHHCCHHHHHHHH CS
    Sugar_tr 100 .....nsvevlivgRvlvGigvGlasvlvPmyisEiApkklRga....lvslyqlaitfGilvaaifglgl.nktsn...adgwrillglqlvpallll 185
                        + +l+v R++vGig+G+++   ++ +sE + + + g     ++ +++++i +G++++a++ ++l   +++   +  wr++lg+ ++p++ll+
  KHJ35101.1 147 dgsvsGLFTALTVYRFFVGIGIGGEYPAGSVSCSEATGELKSGSrnrwFILFTNVMIDWGFVIGAFVPYILvIICTDrhlRLAWRLMLGVGVIPPVLLV 245
                 87787788899999***********************66555542222677789*****************87788899*99***************** PP

                 HHGGGS-- CS
    Sugar_tr 186 illlflPE 193
                 + ++ l E
  KHJ35101.1 246 LSRFKLKE 253
                 *9999887 PP

  == domain 2  score: 54.5 bits;  conditional E-value: 9.8e-19
                 .....HTTHHHHSH...HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THH.....HHHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHH CS
    Sugar_tr 237 eekaswkellssktvrqrlligvvlqifqqltGinaimyysptifenlglsks.....llvtiivgvvnfvatfvaiflvdrfGRRtllllGaagmaic 330
                 ++ +s+  ll  k + +rlli+ ++++f  +++  ++ ++s+ti++n+  +       + ++ ++    +   +++  ++d++G R+ l +G++ +a++
  KHJ35101.1 262 MKDVSIPYLLVIKYYWRRLLIVSLIWFFYDFST-YSFGIFSSTILSNIYGDSAplakiFGWNTVINLFYIPGAMAGSIFSDKVGPRYALTIGVTAQALV 359
                 334556556666559999**************9.7888999999999977777788888888888888888889999********************** PP

                 HHHHH..HHHHTTSS...CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH.......T-HHHHHH CS
    Sugar_tr 331 fvilgivalllvakskaasivaivfialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaig.......ggyvflvf 422
                  ++++   +++ ++ k  ++  ivf  +f+ l ++g+g  + +++s +  ++vR+  +aia+a+  l  f+ +++fp+i ea g       +   f+v 
  KHJ35101.1 360 GFLMA-GLYPILSQVKNVAGFTIVF-GVFLSLGEMGPGDNIGLVASKTCATGVRGQYYAIAAAIGKLGAFVGTYVFPYIEEAGGgantirgAQLPFFVS 456
                 ****9.7777777764444444444.46789*****************************************************898888766779999 PP

                 HHHHHHHHHHHHHHS--STT--C CS
    Sugar_tr 423 aglavlfiifvfffvpetkgrtl 445
                  g+++l+++  +f++p+    t+
  KHJ35101.1 457 SGFCALTAFLSLFGLPHIGQNTI 479
                 9***************9876665 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.3  34.6     6e-23   5.4e-19      12     352 ..      71     429 ..      60     430 .. 0.76
   2 !   22.0  16.4   7.6e-09   6.8e-05      40     185 ..     324     482 ..     319     501 .. 0.83

  Alignments for each domain:
  == domain 1  score: 68.3 bits;  conditional E-value: 6e-23
       MFS_1  12 rsilgpalplalaedlgispseigl...lltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllll..fa.....sslw.lllvlrvlqGlga 99 
                  +++g++ + +l++ +g + ++ +    + ++ ++g+++++l++G+ sd+++r+  ll++ ++++++++l++  ++     s+l+ +l v r++ G+g 
  KHJ35101.1  71 NNVIGSVST-ILKTLYGDAYTQSSAqknISAITFAGTVLGQLIFGYTSDKWSRKGSLLISTVILIIFAALGAgsYGidgsvSGLFtALTVYRFFVGIGI 168
                 455555554.5555555333333333348999*******************8888************5555557634556799999************* PP

       MFS_1 100 galfpagaaliadwfpkeergraigllsa....gfslGailgpllggllasslg.......Wravfyilaivsllafvlfllllpeepperkrkspkee 187
                 g+ +pag +  ++ + + + g+ + ++ +    ++  G+++g+ +  +l+           Wr++  +  i  +l+++     +  ++pe+ +k++ ++
  KHJ35101.1 169 GGEYPAGSVSCSEATGELKSGSRNRWFILftnvMIDWGFVIGAFVPYILVIICTdrhlrlaWRLMLGVGVIPPVLLVL---SRFKLKEPEEFNKESMKD 264
                 *****************8777766555552223667799999999888875555788777777776666666666644...999999999999999999 PP

       MFS_1 188 ekgtgpaplvp....awkallkdpvlwillialllfffgfsglltllply.....lqevlglsglllaglllallalvgailallagrlsdrlgrrrrl 277
                     +  p +      w+ ll    +w +++ + + +fg+++ ++l+ +y     l + +g++  ++++     +++ g   a+ ++ +sd++g+r +l
  KHJ35101.1 265 ----VSIPYLLvikyYWRRLLIVSLIW-FFYDFSTYSFGIFSSTILSNIYgdsapLAKIFGWN-TVINL-----FYIPG---AMAGSIFSDKVGPRYAL 349
                 ....55555554456777777777778.99999999999999888888887777778888888.44444.....44444...55678899********* PP

       MFS_1 278 llallllllaalglallavtssavllllvlvl.iGfglgfv....fpsllalasdlappeeagtasglfntagslggalg 352
                 ++++ + +l+ +++a l ++ s+v  ++++ + +G++l++        +  +as+ + +  +g++++++  +g lg+++g
  KHJ35101.1 350 TIGVTAQALVGFLMAGLYPILSQVKNVAGFTIvFGVFLSLGemgpGDNIGLVASKTCATGVRGQYYAIAAAIGKLGAFVG 429
                 ********************88888888444446665555565559999999**************************99 PP

  == domain 2  score: 22.0 bits;  conditional E-value: 7.6e-09
       MFS_1  40 lyalgaavaslplGrlsdrfGrrrvlllglllfalglllll..f...a..sslw.lllvlrvlqGlga.galfpagaaliadwfpkeergraigllsag 129
                 +  l+++ +++ ++ +sd++G+r  l +g+++ al ++l++  +   +   ++  + +v+ v+ +lg+ g +  +g+++    +++  rg+++++++a 
  KHJ35101.1 324 VINLFYIPGAMAGSIFSDKVGPRYALTIGVTAQALVGFLMAglYpilSqvKNVAgFTIVFGVFLSLGEmGPGDNIGLVASKTCATG-VRGQYYAIAAAI 421
                 44678*******************************66666554544267999999************888888888888888888.************ PP

       MFS_1 130 fslGailgpllggllasslg.......Wravfyilaivsllafvlfllllpeepperkrkspk 185
                   lGa +g  + +++ +++g        +++f++  ++++l + l   l+  ++    + +++
  KHJ35101.1 422 GKLGAFVGTYVFPYIEEAGGgantirgAQLPFFVSSGFCALTAFL--SLFGLPHIGQNTITTE 482
                 ****************99999***9999999***********665..7777666555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (508 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3652.56
//
Query:       KHJ35102.1  [L=227]
Description: putative 60s ribosomal protein l6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-13   51.6   0.0    2.2e-11   44.3   0.0    2.8  2  Ribosomal_L6  Ribosomal protein L6


Domain annotation for each model (and alignments):
>> Ribosomal_L6  Ribosomal protein L6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.9   0.0    0.0047        84      29      76 .]      70     120 ..      63     120 .. 0.67
   2 !   44.3   0.0   1.2e-15   2.2e-11       2      73 ..     129     212 ..     128     213 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0047
                   CTTSEEEEEECSTEEEEEECSESCHHHH...HHHHHHHHHHHHHHHHHHTC CS
  Ribosomal_L6  29 pegvtvevkvegnkvtvivvsgidkekv...AligtvrslinnmikGVteg 76 
                   p++v++ +    ++ + +  ++  ++k+     +gt r+  nn i GV+eg
    KHJ35102.1  70 PPEVKFVLIPPTKNAQSTASHEAAHAKAeieGPLGTMRAYLNNYILGVSEG 120
                   56666665534444444444555555556666689**************98 PP

  == domain 2  score: 44.3 bits;  conditional E-value: 1.2e-15
                   STTEEEEEET............TTEEEEEESSEEEEEE-CTTSEEEEEECSTEEEEEECSESCHHHH....HHHHHHHHHHHHHHHHH CS
  Ribosomal_L6   2 Pvgvrvsikg............gqlvlvlGpkgeltreipegvtvevkvegnkvtvivvsgidkekv....AligtvrslinnmikGV 73 
                   +vg+r++i+             + + l +G+++++++++p +v+  v+    ++t i ++g dke v    A+i+ +r+++++++kG+
    KHJ35102.1 129 GVGYRATIETtattvtpefqgqQFVSLKVGYSHPIELPVPRNVKASVP----QPTRILLQGPDKEIVsqlaAKIRMWRKPEPYKGKGI 212
                   56666666666666666666666788999*******************....9**********************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (227 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       315  (0.0175693); expected 358.6 (0.02)
Passed bias filter:                      279  (0.0155614); expected 358.6 (0.02)
Passed Vit filter:                        11  (0.000613531); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1792.94
//
Query:       KHJ35103.1  [L=426]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (426 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       549  (0.0306208); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.28s 00:00:00.77 Elapsed: 00:00:00.42
# Mc/sec: 3046.73
//
Query:       KHJ35104.1  [L=2159]
Description: putative ccr4-not transcription complex subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.8e-127  425.3   1.3   4.7e-127  423.9   1.3    1.8  1  Not1             CCR4-Not complex component, Not1
    9.2e-85  283.6   2.9    1.3e-84  283.1   0.3    2.3  2  CNOT1_CAF1_bind  CCR4-NOT transcription complex subunit 1 CAF
    2.1e-47  160.7   1.7    2.1e-47  160.7   1.7    2.3  2  DUF3819          Domain of unknown function (DUF3819)
    1.4e-41  141.8   0.2    1.9e-40  138.1   0.0    2.9  4  CNOT1_TTP_bind   CCR4-NOT transcription complex subunit 1 TTP
    2.4e-33  115.4   3.0    4.5e-33  114.4   0.0    3.0  4  CNOT1_HEAT       CCR4-NOT transcription complex subunit 1 HEA


Domain annotation for each model (and alignments):
>> Not1  CCR4-Not complex component, Not1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  423.9   1.3  1.3e-130  4.7e-127      10     367 ..    1797    2154 ..    1788    2155 .. 0.96

  Alignments for each domain:
  == domain 1  score: 423.9 bits;  conditional E-value: 1.3e-130
        Not1   10 kaleeeeeeillafaealhalqPlkfpgFvfaWleLisHRlflpklLelkdqkgwealakLlvdllkfleellkkaelsevvkvlykgtlrillvLl 106 
                  k  + e ++i+l++ +++ +++P++fpgF fa+l+L+sHR flp ++ l+++  we +a+++v+ll++++ellk+ ++s+v+k++y+g+l+++l+  
  KHJ35104.1 1797 KIPAREFQKIMLVLPKIFLDIRPSYFPGFLFAYLSLLSHRSFLPVIMGLPNSISWEPIAEIIVNLLSYVGELLKSLHISPVSKEIYRGVLKLILIFY 1893
                  566778899**************************************************************************************** PP

        Not1  107 hDfPeFLaenhyslcdaippsciqLrNlilsAfPkkmklpdpftpglkvdrleeikeaPkilsdvteaLeeaglkkevdeylkeepsesllaeilek 203 
                  hDfP FLa++h++lc++ip++c+qLrN+ilsA P  +klpdp+++glk+dr+ee++++P+ ++d++  +++ gl + ++++l+++pse+++a+i+++
  KHJ35104.1 1894 HDFPGFLAAYHTRLCTNIPNHCTQLRNIILSASP-IIKLPDPLQKGLKLDRIEEMRDSPENMDDIEVPIRQVGLLDVINQTLQSGPSEDAIAHIAHA 1989
                  **********************************.79************************************************************ PP

        Not1  204 leleekeketg...ekikvnvklinalVlyvgieaieeakkksskavfstkssevallskLikeldpearYlllsaianqLRYpnshThyfskvlle 297 
                  ++ +++   tg   ++i+++++li +l++y+++ +i+++++k++ ++fs+ s++valls+Li+el+pearY++ls+i++qLRYpnshT+yf++v+l+
  KHJ35104.1 1990 MQGKKNY-ITGvgfVPINTDLNLISSLIIYICMYSINNSNAKDR-PSFSALSPDVALLSMLIHELRPEARYFFLSSIVDQLRYPNSHTYYFMQVVLD 2084
                  *965444.555699************************999986.89************************************************** PP

        Not1  298 lFsekesdseekeiqeqItrvLlERlivnrPhpWGllitfieLiknekykfwelpfikaapeieelfesl 367 
                  lFs++ +d+ee +i++q+tr++lER+i+++P+pWGl++t+ eLikneky f+elpfik+ape+ e+f++l
  KHJ35104.1 2085 LFSKDANDQEELDIRQQVTRIFLERMICQWPQPWGLIVTIHELIKNEKYLFLELPFIKSAPEVCERFTAL 2154
                  ****99999999*******************************************************987 PP

>> CNOT1_CAF1_bind  CCR4-NOT transcription complex subunit 1 CAF1-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.17     6e+02       9      48 ..      45      88 ..      39     105 .. 0.73
   2 !  283.1   0.3   3.5e-88   1.3e-84       2     218 ..     888    1106 ..     887    1113 .. 0.97

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.17
                     HHHHHHHHHHS--TTT....HHHHHHHHHHH--GGGHHHHHHHH CS
  CNOT1_CAF1_bind  9 vqdkilfilnnlseen....leeklkelkellkeeylkwfaqyL 48
                     v  +++f+l n+ e+      e+++++lk+l++ + ++ f +y+
       KHJ35104.1 45 VVAQVFFLLSNIKEDKdrtkWEQQAEQLKKLIDANGMEVFQKYF 88
                     677999******98652222677888999999877766666654 PP

  == domain 2  score: 283.1 bits;  conditional E-value: 3.5e-88
                       -----HHHHHHHHHHHHS--TTTHHHHHHHHHHH--GGGHHHHHHHHHHHTTTT-GGGHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHB CS
  CNOT1_CAF1_bind    2 ieepeeevqdkilfilnnlseenleeklkelkellkeeylkwfaqyLVekrvsiepnfhklYlkllekleskkLaeevlketlknikklLns 93  
                       +e+p+ ++qd+ilf+lnn++ +nle+k+ el++++++++++wfa++LV +r+++epnfhklYl+ll+ + +k+L++e l+et+    + Lns
       KHJ35104.1  888 YEDPDGTTQDRILFVLNNMTADNLETKFVELNSIVEDQNHQWFADHLVAHRAKTEPNFHKLYLSLLKLFGRKSLWAETLRETYICAFHSLNS 979 
                       689***************************************************************************************** PP

                       S-G....GGS-HHHHHHHHHHHHHHTGGGT----TTTB-HHHHHHHHHHTT-HHHHHHHHHHHHGGGGG-TTTSTT-HHHHHHHHHHHHHHH CS
  CNOT1_CAF1_bind   94 ekt..lessserslLknLgsWLGsiTlarnkpikhknlalkeLLleayekgrlevvipfvckvLesakkSkvFkppnpWlmailklLaelye 183 
                       e+t   + s+er++LknL+sWLGs+Tlar+kpikh+n+a+k+LL+eay+++rl +vipfvckvL + k+S+vFkppnpW+m++++ L+ely 
       KHJ35104.1  980 EATlsPNGSTERAQLKNLASWLGSLTLARDKPIKHTNIAFKQLLTEAYQTNRLLIVIPFVCKVLGQGKESTVFKPPNPWVMDVVRALRELYL 1071
                       ***666789*********************************************************************************** PP

                       HT---HHHHHHHHHHHHHTT--TTSS---S----X CS
  CNOT1_CAF1_bind  184 ladlklnlkFeievLckeLkldlkdlepsellker 218 
                        adlklnlkFeievL+ eL++d k++eps+ + +r
       KHJ35104.1 1072 GADLKLNLKFEIEVLFGELSIDPKTIEPSNEIMNR 1106
                       *****************************999876 PP

>> DUF3819  Domain of unknown function (DUF3819)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.7   1.7   5.9e-51   2.1e-47       2     146 .]    1171    1310 ..    1170    1310 .. 0.97
   2 ?   -2.0   0.1      0.85   3.1e+03      81     128 ..    1636    1687 ..    1624    1692 .. 0.60

  Alignments for each domain:
  == domain 1  score: 160.7 bits;  conditional E-value: 5.9e-51
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----..------ CS
     DUF3819    2 dlkklvqlaierairEiiqpvversvtiAvitteelvkKDFalepdenkmrkaahlmvrnLagsLalvtckepLresissnlrqllknaltkqlkeq 98  
                  +l+ +v++a +ra+ Eii+pvversvtiA+i+t +++kKDFa+ep+e k+r+aa lmv++ agsLalvt+kepLr+s+++++r+l  +      ++ 
  KHJ35104.1 1171 RLQDIVRTATTRAVYEIISPVVERSVTIAAISTAQMIKKDFATEPNEAKVRNAAILMVKKTAGSLALVTSKEPLRASMTNYIRALSGDL-----PQG 1262
                  5899*********************************************************************************9998.....566 PP

                  -.---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH CS
     DUF3819   99 eleqaiqilvndNlelacaliekaaaekavreideklakelearkthr 146 
                   +e +i ++vn+Nl+lac+ +ek a e+a++ei+e +++elear+ hr
  KHJ35104.1 1263 LPEGTIIMCVNSNLDLACSQVEKKAEERAIPEIEEIIEPELEARRVHR 1310
                  67999****************************************998 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.85
                  HHHHH-----..-------.....---HHHHHHHHH..HHHHHHHHHHHHHHHH CS
     DUF3819   81 snlrqllknaltkqlkeqe....leqaiqilvndNl..elacaliekaaaekav 128 
                  + + + + ++  ++++ ++     e++++ + n+N   + ++++i ++  ++ +
  KHJ35104.1 1636 KDIDRNIGDS--QNFRRDQmeyvFEEWVHLCNNSNAsdQAVVQFITQMYNKQLI 1687
                  4444444444..333322223557999999999998434778888887766666 PP

>> CNOT1_TTP_bind  CCR4-NOT transcription complex subunit 1 TTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1       1.6   5.7e+03      21      46 ..      64      89 ..      57      92 .. 0.82
   2 ?   -3.7   0.0       1.5   5.5e+03     124     167 ..     263     307 ..     260     317 .. 0.72
   3 !  138.1   0.0   5.3e-44   1.9e-40      30     169 ..     689     829 ..     668     850 .. 0.90
   4 ?   -1.1   0.0      0.25     9e+02     118     148 ..    2059    2088 ..    2051    2093 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 1.6
  CNOT1_TTP_bind 21 lnseteqqvskeveeeansyFqklYs 46
                     +++  +q++k ++++  ++Fqk++s
      KHJ35104.1 64 KWEQQAEQLKKLIDANGMEVFQKYFS 89
                    5677888999999999999***9997 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 1.5
  CNOT1_TTP_bind 124 Lealrkppgskmfefgi.kaLeqfksrLkeypqycqhlasiphlk 167
                     L  l+ ++   ++ +g  +a ++ +++ +ey q c+hl + ++++
      KHJ35104.1 263 LRILSDQKSLAFYMCGTgAAFTKDNDTCSEYLQNCSHLLTEDNVS 307
                     55555665566666666356788889999********98776665 PP

  == domain 3  score: 138.1 bits;  conditional E-value: 5.3e-44
  CNOT1_TTP_bind  30 skeveeeansyFqklYseeisveevietLkkfksskskrekevfacmiknLfdEyrffpqYPekeLkitaqLfGsiieeqLvsykalgiaLrivL 124
                     +  ++e+ ++ ++++Ys +++v +v++ L+ +k s ++ +++vfacmi+ LfdE+  +  YP + L +ta LfG+ii+++L+++++l+i L ++L
      KHJ35104.1 689 PAAANEKMEEHYKRMYSDDLQVRNVVDALEGYKRSRDPADQDVFACMIHGLFDEFALYGTYPLEALATTAVLFGGIISRRLIENLPLEIGLGMIL 783
                     466789999************************************************************************************** PP

  CNOT1_TTP_bind 125 ealrk.ppgskmfefgikaLeqfksrLkeypqycqhlasiphlkef 169
                     ea+r   pg  m++fg++aL+q+ srL e+p +c++l +ip l+ +
      KHJ35104.1 784 EAVRDhAPGESMYKFGLQALMQLLSRLCEWPGFCVKLLQIPYLQGT 829
                     ****97899********************************99943 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 0.25
  CNOT1_TTP_bind  118 iaLrivLealrkppgskmfefgikaLeqfks 148 
                      ++L  ++++lr p +s+ ++f+   L+ f++
      KHJ35104.1 2059 FFLSSIVDQLRYP-NSHTYYFMQVVLDLFSK 2088
                      68999*******8.8********99999875 PP

>> CNOT1_HEAT  CCR4-NOT transcription complex subunit 1 HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       3.6   1.3e+04      97     118 ..     184     205 ..     158     219 .. 0.65
   2 ?   -1.6   0.0      0.71   2.5e+03      20      54 ..     342     377 ..     319     379 .. 0.81
   3 !  114.4   0.0   1.3e-36   4.5e-33       2     150 .]     499     642 ..     498     642 .. 0.92
   4 ?   -1.6   0.0      0.71   2.5e+03      30      67 ..    1550    1588 ..    1541    1605 .. 0.75

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 3.6
                 -TT...THHHHHHHHHHHHH-- CS
  CNOT1_HEAT  97 kehgekfvqalldfLeekakqe 118
                 ++  ++ +++ l+fL +k ++e
  KHJ35104.1 184 DAIISNNYSQFLQFLARKNNDE 205
                 3333335666666666665554 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.71
                 HHHHC--HHHHHHHHHS-S-.........-SHHHHH CS
  CNOT1_HEAT  20 lvlhklweidrqlllkalvdayakdp.lelsrIldv 54 
                  v++++ ++d  +  ++++++y+  + l l++I+d+
  KHJ35104.1 342 QVISHFDQQDLRITQQQFLNLYKAVQpLALEEIIDI 377
                 3999****************9988775779999997 PP

  == domain 3  score: 114.4 bits;  conditional E-value: 1.3e-36
                 HHHHHHHHHHHH.HS-GGGHHHHC--HHHHHHHHHS-S-........-SHHHHHHHHTT-HHHHHHHS-TTCHHHCHHHHHHHT---HHHHHHHH--TT CS
  CNOT1_HEAT   2 elidelfplfls.nhpnsalvlhklweidrqlllkalvdayakdplelsrIldvaqelkilsellnklpfnfaldLaalasrreyldlekwledklkeh 99 
                 +++  lf+ +l+  +p  ++vl++lw++d  +++++lvda+ak pl+l+ Ild+a ++k+l++l+++    f+ldLaa+a++r+ l+l++w ++     
  KHJ35104.1 499 DTLFGLFDRYLTqADPHRDFVLESLWRKDCGWVAQRLVDAHAKTPLRLPVILDHAFRHKWLNDLTSM-HNGFGLDLAAIAHARGLLNLDEWRRNVTGIR 596
                 778889*9999999999**************************************************.546********************77777777 PP

                 ...THHHHHHHHHHHHH--T.......TTSSSSTTTS--HHHHHHHHHHHH CS
  CNOT1_HEAT 100 gekfvqalldfLeekakqelerqeekpsnepepkskslsvetvatlLevLq 150
                   +f+q+l +fL++ka++el+      + + e +s++l+v+tva+lL++L+
  KHJ35104.1 597 IPEFAQSLKKFLDIKASHELSF-----QRTGELSSVMLPVKTVAALLNLLE 642
                 667*****************87.....5567789**************996 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 0.71
                  HHHHHHS-S-........-SHHHHHHHH.TT-HHHHHHH CS
  CNOT1_HEAT   30 rqlllkalvdayakdplelsrIldvaqe.lkilsellnk 67  
                   +l+ ++++d+++ d+     I++  +e lk+ls+l++ 
  KHJ35104.1 1550 ISLIKTEMIDWHRIDSETSKAIIQRREEpLKFLSSLVDA 1588
                  5789999********977666665554448899888875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       701  (0.0390987); expected 358.6 (0.02)
Passed bias filter:                      563  (0.0314016); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.13u 0.29s 00:00:01.42 Elapsed: 00:00:00.47
# Mc/sec: 13837.52
//
Query:       KHJ35105.1  [L=618]
Description: hypothetical protein EV44_g2848 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (618 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       751  (0.0418874); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4309.69
//
Query:       KHJ35106.1  [L=116]
Description: hypothetical protein EV44_g5313 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (116 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       192  (0.0107089); expected 358.6 (0.02)
Passed bias filter:                      116  (0.00646996); expected 358.6 (0.02)
Passed Vit filter:                         6  (0.000334653); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.23s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 907.85
//
Query:       KHJ35107.1  [L=638]
Description: hypothetical protein EV44_g1480 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (638 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.22s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 4713.74
//
Query:       KHJ35108.1  [L=217]
Description: hypothetical protein EV44_g5915 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.13   12.4   0.0       0.19   11.8   0.0    1.2  1  DUF4107   Protein of unknown function (DUF4107)


Domain annotation for each model (and alignments):
>> DUF4107  Protein of unknown function (DUF4107)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   1.1e-05      0.19      98     158 ..      82     142 ..      65     145 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.1e-05
     DUF4107  98 kspeavkqqpvqqqtvvmppyagyGmynnpfepfdpkiGGsnwyhyGkrrkavkketeekk 158
                 ksp+   q+p+q++ v      ++ +  n    fdpk+  +n   + + rk+ kk ++ k 
  KHJ35108.1  82 KSPPYDSQKPIQRKPVPPQEIWPHNLRLNEAAEFDPKTPLTNKSIHSRARKTLKKRYQSKF 142
                 788889999999999877777888898888889************************9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       347  (0.0193541); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1627.37
//
Query:       KHJ35109.1  [L=169]
Description: putative ubiquitin-conjugating enzyme e2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-28   99.2   0.0    1.7e-28   99.0   0.0    1.1  1  UQ_con    Ubiquitin-conjugating enzyme
     0.0088   16.3   0.0       0.01   16.1   0.0    1.3  1  RWD       RWD domain
  ------ inclusion threshold ------
      0.017   14.8   0.0      0.025   14.2   0.0    1.2  1  UFC1      Ubiquitin-fold modifier-conjugating enzyme 1
       0.13   12.2   0.0       0.19   11.7   0.0    1.2  1  BphX      BphX-like


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.0   0.0   3.9e-32   1.7e-28      15     124 ..      28     141 ..       7     146 .. 0.83

  Alignments for each domain:
  == domain 1  score: 99.0 bits;  conditional E-value: 3.9e-32
                 TTEEEEEEET..TEECEEEEEEEB....TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBE.TTSBB-CGGGSTTT--TTSHHHHHHHHHHHH CS
      UQ_con  15 sgisaklvdd..enlfewkvlikg...pedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvd.ksGevcldiLkeekWspaltlesvllsiqsL 107
                 + i++ +  +  +nl ++++++ g   p++t Y++g + l++++pe+YP++pPk++f+tki HPn++ +sGevcld+L+++ W+p+l +  +l  i  L
  KHJ35109.1  28 RYIESLVP-KspDNLLHLSAILSGqslPPETGYANGRWLLSIDIPENYPNTPPKIQFITKICHPNIKwESGEVCLDVLQDR-WTPVLGIVGALECIGRL 124
                 22222222.1358*********9955569**************************************************55.***************** PP

                 HHS--TTS-SSHHHHHH CS
      UQ_con 108 laepnpesplnkeaakl 124
                 l e  ++spl +e+a+l
  KHJ35109.1 125 LVEGATDSPLGIEVAAL 141
                 ***********999875 PP

>> RWD  RWD domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   2.3e-06      0.01      56      92 ..      65     104 ..       7     124 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2.3e-06
                 EEEEEE-SSTTSS--EEEEEECC...SS-HHHHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxx RF
         RWD  56 kleiklpeeYPeeaPiislsste...nlpkeqvksleekl 92 
                  l i+ pe+YP+++P+i++ ++    n++ e  + + + l
  KHJ35109.1  65 LLSIDIPENYPNTPPKIQFITKIchpNIKWESGEVCLDVL 104
                 689**************99887755655544444455555 PP

>> UFC1  Ubiquitin-fold modifier-conjugating enzyme 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   5.6e-06     0.025      77     133 ..      66     118 ..      59     125 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 5.6e-06
        UFC1  77 lefdipvtypataleialpeldgktakmyrgGkicltihfkplwaknvpkfGiahal 133
                 l++dip++yp+t+++i++     + +  +  G++cl++    l  + +p  Gi+ al
  KHJ35109.1  66 LSIDIPENYPNTPPKIQFITKICHPNIKWESGEVCLDV----LQDRWTPVLGIVGAL 118
                 789**************99999999999********97....556667777777665 PP

>> BphX  BphX-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   4.2e-05      0.19      25      74 ..      79     131 ..      72     145 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 4.2e-05
        BphX  25 fvaagllellyPGveldqgepifkllldawl.vvGl..qlaaiGvvalwGard 74 
                 +++    +  +P ++ + ge+++++l+d w  v+G+   l  iG +++ Ga d
  KHJ35109.1  79 PKIQFITKICHPNIKWESGEVCLDVLQDRWTpVLGIvgALECIGRLLVEGATD 131
                 55555667889*******************866787445889******99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (169 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       235  (0.0131073); expected 358.6 (0.02)
Passed bias filter:                      228  (0.0127168); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1298.85
//
Query:       KHJ35110.1  [L=129]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.19   12.0   0.9        2.5    8.4   0.9    2.2  1  CKS       Cyclin-dependent kinase regulatory subunit


Domain annotation for each model (and alignments):
>> CKS  Cyclin-dependent kinase regulatory subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.9   0.00014       2.5      30      41 ..      97     119 ..      18     125 .. 0.79

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00014
         CKS  30 s...........rlLsekewraL 41 
                             rlL+e+ewr+L
  KHJ35110.1  97 VtkansekrlflRLLQEHEWRKL 119
                 0333444567779********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       688  (0.0383736); expected 358.6 (0.02)
Passed bias filter:                      482  (0.0268838); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 944.06
//
Query:       KHJ35111.1  [L=485]
Description: putative ammonium transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   3.1e-118  394.9  25.9   3.6e-118  394.7  25.9    1.0  1  Ammonium_transp  Ammonium Transporter Family
  ------ inclusion threshold ------
       0.08   13.0   3.2      0.092   12.8   0.6    2.5  2  Phage_holin_2_1  Bacteriophage P21 holin S


Domain annotation for each model (and alignments):
>> Ammonium_transp  Ammonium Transporter Family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  394.7  25.9  4.1e-122  3.6e-118       1     399 []      40     445 ..      40     445 .. 0.98

  Alignments for each domain:
  == domain 1  score: 394.7 bits;  conditional E-value: 4.1e-122
                      HHHHHHHHHHHHHHHHHHHHHHHHSSGGGHHHHHHHHHHHHHHHHHHHHHTHHHHHHSSCBSSSSSCE-.......TTTTSCCGCCTTCCHHHH CS
  Ammonium_transp   1 aflllsaalvifmqagfalleaglvrsknvlnilvknlldlavvvllyvlfGyslafgkskgvsgfign.......lglsaagvqdetlldglf 87 
                      a+++ s+alv++m +g++++++gl r+k++l++++ ++++ avv+++++l+Gy+l+f++s  +++fign       + l+  +++  +++d+lf
       KHJ35111.1  40 AWVMTSTALVLLMIPGVGFFYSGLARRKSALSLILLSVMASAVVSIQWFLWGYTLVFSRS--GGKFIGNfsnfgflHVLAEPSITSPKIPDLLF 131
                      79*********************************************************9..********99999878888899999******* PP

                      HHHHHHHHHHHHHHHHHHCTTTB-HHHHHHHHHHHHHHTHHHHHHHHHS.SSHHHHTT--.-SSSTTTTHHHHHHHHHHHHHHHS-STTTTGTT CS
  Ammonium_transp  88 flfqlafaataitivsgavaerikfsayllfsallgtlvyppvahwvwgeggwlaklgvliDfAgstvVHlvggvagLaaalvlgkregrfegk 181
                      +++q +f+a++++++ gavaer ++ + ++f + ++t++y p+a+w+w+  gw+ ++g+l DfAg+t VH+ +g a+La+ l+lgkr+g +   
       KHJ35111.1 132 AVYQGMFSAITVALTVGAVAERGRMLPAIIFMITWTTVIYDPIAYWTWNPSGWMFQMGAL-DFAGGTPVHISAGCAALAYSLMLGKRRGHG-TG 223
                      ************************************************************.****************************99.79 PP

                      TSS--GSBHHHHHHHHHHHHHHHHHHHHGGGSSSSHHHHH.HHHHHHHHHHHHHHHHHHHHHHHCSS-BHHHHHHHHHHHHHHHTTTTTTS-HH CS
  Ammonium_transp 182 eeaikghnlpfavlGtllLwfgWfgFNaGsaltankrararaavtTllAaaagaltallisrlkegkinvlglanGilAGlVAiTaacavvepw 275
                      e ++++hn++ +v Gt++Lw+gWfgFNaGsa++an ra   a+v+T+l+a++g++t++l+++ +e k++++g ++G++AGlVAiT++ ++v  w
       KHJ35111.1 224 ELNYRPHNVMHIVTGTIFLWVGWFGFNAGSANAANLRAVM-ATVVTNLSACVGGVTWCLLDYRHERKWSTVGFCSGVVAGLVAITPGSGYVPAW 316
                      99*************************************9.***************************************************** PP

                      HHHHHHHHHHHHHHHHHHHHHHHHTC-CTTHHHHHHHHHHHHHHHHHHHHTSHHHC....SSHSSTTGGGT-CHHHHHHHHHHHHHHHHHHHHH CS
  Ammonium_transp 276 gAliiGlvAgvlsvlgvkklkeklkidDsldvvavHgvgGiwGllavgifaaekvv....askisggllsgegkqlvvqligilvilayafvvt 365
                      +A++ G+v+++ +++++k lk  + +dD+ld++a H++gG++G +++g+fa+e+ +    ++ ++gg+ls+++ ql++ql+ +l+  +y+f+ t
       KHJ35111.1 317 SAIVFGAVGAAGANYATK-LKFIFDVDDALDIFAEHAIGGLIGNILTGLFATEYIPhldgVTTVRGGWLSHNWVQLGYQLADSLAGGLYSFCGT 409
                      *****************8.***********************************99************************************** PP

                      HHHHHHHHHHTT..SB--HHHHHHSHHHHHHSSSSB CS
  Ammonium_transp 366 lilllllklllg..LrvseeeeevglDvaehgetay 399
                       i+l+l++l++g  Lrvse++e  glD+ae+ge+ y
       KHJ35111.1 410 CIILFLMNLIPGlsLRVSEKDEISGLDEAEIGEFVY 445
                      ************99*******************987 PP

>> Phage_holin_2_1  Bacteriophage P21 holin S
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.6     1e-05     0.092      13      47 ..     274     305 ..     262     308 .. 0.77
   2 ?   -1.6   0.1      0.32   2.8e+03      38      49 ..     353     364 ..     317     367 .. 0.59

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1e-05
  Phage_holin_2_1  13 ggsigywlkqlldklspeeWsaigvlgglvigllT 47 
                       g + +w   lld  +   Ws++g  +g+v gl+ 
       KHJ35111.1 274 VGGV-TW--CLLDYRHERKWSTVGFCSGVVAGLVA 305
                      3333.56..79*********************985 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.32
  Phage_holin_2_1  38 lgglvigllTyl 49 
                      +ggl+  +lT l
       KHJ35111.1 353 IGGLIGNILTGL 364
                      555665555554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (485 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       598  (0.0333538); expected 358.6 (0.02)
Passed bias filter:                      308  (0.0171789); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.43
# Mc/sec: 3400.91
//
Query:       KHJ35112.1  [L=278]
Description: putative cyclin-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-10   41.9   0.0    1.9e-10   41.3   0.0    1.3  1  Cyclin    Cyclin
     0.0054   15.8   0.0     0.0069   15.5   0.0    1.1  1  DUF3383   Protein of unknown function (DUF3383)
  ------ inclusion threshold ------
      0.029   14.1   0.0      0.044   13.5   0.0    1.3  1  Cyclin_N  Cyclin, N-terminal domain


Domain annotation for each model (and alignments):
>> Cyclin  Cyclin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.3   0.0   3.2e-14   1.9e-10      81     161 .]      56     136 ..      32     136 .. 0.92

  Alignments for each domain:
  == domain 1  score: 41.3 bits;  conditional E-value: 3.2e-14
                 HHHHHHHHHHHHHHHH..H-TT---STTTHHHHHHHHHHHHHHHH-SS---HHHHHHHHTS-HHHHHHHHHHHHHHTTT-- CS
      Cyclin  81 plvllgtliYldrivkrcvsealvvtsanihRllivallvatKflvDlsysnekfakvggislkELnkLEidFlflvdFdl 161
                   +llg+ +   r+  + +     +    ++R+l v+ll  +Kfl+D   +n  +++v  +++++Lnk E+d+l+ +++++
  KHJ35112.1  56 ATILLGMHYLAKRVNMGKIVSNTRISEKDAYRMLTVGLLLGSKFLDDNTFQNRSWSEVSCVPVEDLNKTELDWLLAMNYNI 136
                 5688888888889999999999********************************************************986 PP

>> DUF3383  Protein of unknown function (DUF3383)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.5   0.0   1.2e-06    0.0069     269     347 ..      70     146 ..      22     149 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.5 bits;  conditional E-value: 1.2e-06
     DUF3383 269 kalaykrtvlqysstdpyaaasalgraasvnFnannttitlkFkqepgitaevltstqadaldaknyNyYgnynnntai 347
                 +  ++ + + +  + ++ + ++ +g ++   F   nt ++  + + + ++ e l++t+ d l a nyN+Y+n ++n+++
  KHJ35112.1  70 NMGKIVSNTRIS-E-KDAYRMLTVGLLLGSKFLDDNTFQNRSWSEVSCVPVEDLNKTELDWLLAMNYNIYVNLDQNVDY 146
                 444444444444.3.567788999999999*******************************************999876 PP

>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   7.3e-06     0.044      33     127 .]      39     137 ..      17     137 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 7.3e-06
                 HHHHHHHHHHHHTT--TTHHHHHHHHHHHHHH.HS---CC.....CHHHHHHHHHHHHHHHHSSS---HHHHHHHTTTSS-HHHHHHHHHHHHHHTTT- CS
    Cyclin_N  33 ilidwlvevaekfkltpetlflavnyldRfls.kksvpkd.....klqlvgatcLllAaKveeisppkledlvyitdeafteeeilemErliLetLnfd 125
                 +l +++  + ++++l + t++l + yl + +   k+v+++     ++ ++ ++ Lll +K+ ++++ + + +  +  + +  e++++ E++ L ++n++
  KHJ35112.1  39 SLRKFVSGLLSSTRLPSATILLGMHYLAKRVNmGKIVSNTrisekDAYRMLTVGLLLGSKFLDDNTFQNRSWSEV--SCVPVEDLNKTELDWLLAMNYN 135
                 556688888899999999999999998766553444444466666*************************99999..45889****************9 PP

                 -- CS
    Cyclin_N 126 ls 127
                 ++
  KHJ35112.1 136 IY 137
                 85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (278 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      286  (0.0159518); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 1991.97
//
Query:       KHJ35113.1  [L=232]
Description: putative gnat family acetyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00065   19.6   0.0     0.0011   18.8   0.0    1.3  1  Acetyltransf_10  Acetyltransferase (GNAT) domain
      0.002   18.4   0.0     0.0031   17.7   0.0    1.4  1  Acetyltransf_1   Acetyltransferase (GNAT) family
     0.0025   18.2   0.0     0.0042   17.5   0.0    1.4  1  Acetyltransf_7   Acetyltransferase (GNAT) domain


Domain annotation for each model (and alignments):
>> Acetyltransf_10  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.8   0.0   1.9e-07    0.0011      53     112 ..     144     201 ..     127     204 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.8 bits;  conditional E-value: 1.9e-07
  Acetyltransf_10  53 hisllfVdpeyrgqGigkaLleaveeeaekdgikleltvnaspyavpfYeklGFkavgee 112
                      h    +++p y++ G g+ +++++ + + +++++ +  +++ p   ++++klGF++ g+ 
       KHJ35113.1 144 HRRGSMIRPGYQKMGFGTYIMHFCNQIC-DAKGE-RQWARSRPSSLSLFKKLGFVEKGNL 201
                      666779**********************.55566.899*****************98875 PP

>> Acetyltransf_1  Acetyltransferase (GNAT) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   5.3e-07    0.0031      57     117 .]     139     195 ..      36     195 .. 0.68

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 5.3e-07
                     STTEEEEEEEEESGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTEHHHHHHHHHTTE CS
  Acetyltransf_1  57 kggvayieslaVspeyrgkGlGsaLlealeerareegikkivlaveedndaairlYeklGF 117
                      ++ ++ ++ +++p y+++G G+  +  + +++  +g +  ++    +   +  l++klGF
      KHJ35113.1 139 PENDYHRRGSMIRPGYQKMGFGTYIMHFCNQICDAKGERQ-WA---RSRPSSLSLFKKLGF 195
                     3566777799**************************8877.77...556668****88*99 PP

>> Acetyltransf_7  Acetyltransferase (GNAT) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0     7e-07    0.0042      26      76 .]     143     197 ..     121     197 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 7e-07
                     CTEE.EEE-GGGTTSSHHHHHHHH..TT...SEEEEEEEEE.THHHHHHHHHHTTEEE CS
  Acetyltransf_7  26 eitr.laVdpeyrgkGiGraLlea..ae...kgiileqlel.naekaikfYeklGFee 76 
                     ++ r   ++p y++ G G+ ++ +  ++   kg +  + +  + + ++++++klGF+e
      KHJ35113.1 143 YHRRgSMIRPGYQKMGFGTYIMHFcnQIcdaKG-E--RQWArSRPSSLSLFKKLGFVE 197
                     34445679***************8541134444.2..224422237799*******96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      331  (0.0184617); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1728.68
//
Query:       KHJ35114.1  [L=411]
Description: putative ndt80 like dna-binding family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.2e-29  103.0   0.0    4.6e-29  102.0   0.0    1.5  2  NDT80_PhoG  NDT80 / PhoG like DNA-binding  family


Domain annotation for each model (and alignments):
>> NDT80_PhoG  NDT80 / PhoG like DNA-binding  family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.0   0.0   2.6e-33   4.6e-29       1     186 []     180     343 ..     180     343 .. 0.86
   2 ?   -3.7   0.0      0.65   1.2e+04      97     113 ..     365     381 ..     355     398 .. 0.60

  Alignments for each domain:
  == domain 1  score: 102.0 bits;  conditional E-value: 2.6e-33
  NDT80_PhoG   1 ewvcyrRNyfqvvasfeleglslekfvkhsftilenelesgeklpikyfalkikatknseddseielvqhtakrdkgpqfaPeivalvpkelpkhqlir 99 
                 e++cyrRN+fq+++s+++     +++  + +         +eklp  +++++i+a++++ d+++++l+     +  +p+  +++v+l++ e+ ++++  
  KHJ35114.1 180 ELTCYRRNLFQISGSVTT-----PQKGLYYM-------RGSEKLPLISMEVQISAIESV-DGHKVRLIVI-PWKTPPPNSPEPTVSLLDREPMPIPITA 264
                 68****************.....66666455.......6899*****************.5********5.4445555555556788888888888877 PP

  NDT80_PhoG 100 easnvrnesklkkfdeikkvarfeRlqFksatannkrrkq.qrffkLvvkllaivekeeskgteikiaelespplIVRGrsPsnyesr 186
                  ++   ++        + +++ ++RlqF+ atann+rrk+ q++f+L++++ +    + ++g ++ + e  ++p++VRGrsP+n++sr
  KHJ35114.1 265 YKGISDSSRG-----IACSPIAYRRLQFRVATANNGRRKElQQHFTLHLNVIG----TLADGSQVDVCETSTAPIVVRGRSPRNFQSR 343
                 6666555555.....6889*********************************7....9***************************986 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 0.65
  NDT80_PhoG  97 lireasnvrnesklkkf 113
                 +  +asnv  e+++k+ 
  KHJ35114.1 365 MNLMASNVLAENSVKQA 381
                 34567777777766654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (411 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       297  (0.0165653); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 3021.49
//
Query:       KHJ35115.1  [L=282]
Description: hypothetical protein EV44_g3148 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       693  (0.0386525); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2178.17
//
Query:       KHJ35116.1  [L=248]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
        7.4    6.5   9.5        9.2    6.2   0.3    3.2  3  HscB_4_cys   Co-chaperone HscB tetracysteine metal binding mo


Domain annotation for each model (and alignments):
>> HscB_4_cys  Co-chaperone HscB tetracysteine metal binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.1     0.042   7.6e+02      19      23 ..     153     157 ..     144     158 .. 0.82
   2 ?    6.2   0.3   0.00051       9.2       1      10 [.     170     179 ..     170     183 .. 0.85
   3 ?    3.6   1.3    0.0034        60       2      10 ..     190     198 ..     190     205 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.042
                 B-TTT CS
  HscB_4_cys  19 FCpqC 23 
                 FC +C
  KHJ35116.1 153 FCKRC 157
                 ***** PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.00051
                 -B-SSS--B- CS
  HscB_4_cys   1 PrCWnCGgpg 10 
                 P+C nCG+ +
  KHJ35116.1 170 PSCGNCGSTM 179
                 9******987 PP

  == domain 3  score: 3.6 bits;  conditional E-value: 0.0034
                 B-SSS--B- CS
  HscB_4_cys   2 rCWnCGgpg 10 
                 +C nCGgp+
  KHJ35116.1 190 KCRNCGGPR 198
                 599****97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (248 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       779  (0.0434492); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1888.38
//
Query:       KHJ35117.1  [L=1078]
Description: putative isoleucyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   3.4e-220  732.4   0.0     5e-220  731.8   0.0    1.2  1  tRNA-synt_1   tRNA synthetases class I (I, L, M and V)
    6.7e-26   91.1   0.0    1.7e-25   89.8   0.0    1.7  1  Anticodon_1   Anticodon-binding domain of tRNA
    3.7e-13   49.0   0.1      3e-05   22.9   0.0    4.0  3  tRNA-synt_1g  tRNA synthetases class I (M)
  ------ inclusion threshold ------
       0.05   12.9   0.0       0.19   11.0   0.0    2.0  3  tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1  tRNA synthetases class I (I, L, M and V)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  731.8   0.0  1.1e-223    5e-220       2     599 ..      12     634 ..      11     637 .. 0.98

  Alignments for each domain:
  == domain 1  score: 731.8 bits;  conditional E-value: 1.1e-223
  tRNA-synt_1   2 lyekWeeedvfkkelekekekkefilvdgPPyvtGslHiGhalaktlkdivirykrmkGkevlyvpGwDhaGlaieakvekklgakekkerkklgree 99 
                  +++ W++ ++f+++le +++++ ++++dgPP++tG +H+Gh la+t+kdi+ ry +mkG++v++++GwD++Gl+ie++++kklg ++k+ ++k+g e+
   KHJ35117.1  12 ILKIWKKIKAFETQLELSRDRPVYTFYDGPPFATGLPHYGHLLASTIKDIIPRYWSMKGFHVERRFGWDTHGLPIEHEIDKKLGVSGKDAVMKFGLEK 109
                  7899********************************************************************************************** PP

  tRNA-synt_1 100 frekvrewkaeyaeeirkqvkrlGvsvDfdreylTldkeleeavkevfvrladkgliyrgkklvnwstklktalselEv..eykdkkdalihvafpla 195
                  ++e++r+++++y++e+r ++ rlG++vDfd++y+Tld  ++e+ +++f++++d+g iy+g++++++st l+tals++E+  +y++ +d+++ v+fpl 
   KHJ35117.1 110 YNEECRAIVMRYSSEWRATIDRLGRWVDFDNDYKTLDVTFMESEWWIFKKIFDQGAIYQGHRVMPYSTVLTTALSNFEAnqNYQEITDPAVVVSFPLL 207
                  *******************************************************************************999**************** PP

  tRNA-synt_1 196 dkeevklviaTTtPeTllgdtavavnpeldyv.....itkeklilaeallkslvkke.sek.kiledergkeLegkevelpl.......vnrkipiia 279
                  +++++ l ++TTtP+Tl+++t++a +p+++y+      t++++il+e+llk+l+k   ++k ki+e+++g+e+ g ++e+++       ++  +++++
   KHJ35117.1 208 EDSNTCLLAWTTTPWTLPSNTGLAAHPDFEYIkifddLTGKYYILLEKLLKTLYKDPkKSKfKIVERIKGSEMLGWKYEPLFdyfydefKEYGFRVLN 305
                  ****9****************************99999*****************9976668************************999999****** PP

  tRNA-synt_1 280 ddyvdkeaGtGvVkiaPahdedDyevgkkynl.....evinildedgtlteeaaefeglkvfdarkkvveelkekglllkaekiehsvpfcerskkpi 372
                    yv+ ++G G+V++aPa++e+Dy+v+ +y++      ++n++de+g++t ++ ef+g++v+ a+k+++++lk kg+l+ +++i+hs+p+c rs++p+
   KHJ35117.1 306 ATYVTDDSGVGIVHQAPAFGEEDYNVALEYGIinerrAPPNPVDESGHFTSKVREFSGQHVKSADKAIIKYLKGKGRLIIDSQIRHSYPMCPRSDTPL 403
                  **********************************99999*********************************************************** PP

  tRNA-synt_1 373 iyrateqWfvrvkeladaalkavekvqfvpks.kekryaswleniqdWciSRqrwWGhriplfvsketeevvvreelkelvagreeeeaekkalekea 469
                  iyr +++Wf+r++++  +++k++e  ++vp + kekr++sw++n++dW++SR+r+WG++ipl+vs++ ee +++ +++el++ ++  ++e ++++++ 
   KHJ35117.1 404 IYRTVPSWFIRITDIIPKMIKNIEGSHWVPTFvKEKRFTSWIANARDWNVSRNRYWGTPIPLWVSDDLEEKICVGSIEELKE-LSGFKGELTDIHRDK 500
                  *******************************99**********************************************999.888899999****** PP

  tRNA-synt_1 470 kdkl....kkekgelekdedvlDvWFsSgswpfstlgypeedteelkkffpadmlleGlDiirgWvarlillslaltgsePfkevlvhglvrdeeGrK 563
                  +d++    k +kg l+++e+v+D+WF+Sgs+p+++++yp+e++e+l++ fp d+++eGlD++rgW+++l++l+++l+g +Pfk+ +v+g++++e+G+K
   KHJ35117.1 501 IDHItipsKMGKGPLKRVEEVFDCWFESGSMPYASQHYPFENKEKLESSFPGDFIAEGLDQTRGWFYTLLVLGTHLFGISPFKNCVVNGIILAEDGKK 598
                  ************************************************************************************************** PP

  tRNA-synt_1 564 mSKslgNvidpldvikkygadalRltlilsdvgrdi 599
                  mSK+l+N++dp+ +i+kyg dalRl++i+s+ ++++
   KHJ35117.1 599 MSKRLKNYPDPTLIISKYGSDALRLYMINSPALKAE 634
                  ******************************998876 PP

>> Anticodon_1  Anticodon-binding domain of tRNA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.8   0.0   3.8e-29   1.7e-25       1     150 [.     691     846 ..     691     848 .. 0.89

  Alignments for each domain:
  == domain 1  score: 89.8 bits;  conditional E-value: 3.8e-29
  Anticodon_1   1 drwilselnklvkevteayeeyrfnkaasalyeffwndlcdwylelvkprlysesaedkra.aqevllevletllrllaPfmPfitEelwqr...... 91 
                  drwil+ ++ l++ v+e ++ yr+++++ +l   ++++  +wy++++++rl++e + ++++ a ++l+evl tl+++laPf+PfitE ++qr      
   KHJ35117.1 691 DRWILASCQTLLQFVNEEMDAYRLYTVVPRLLC-MIDNTTNWYIRFNRKRLKGEFGVEDTKhALNTLFEVLYTLIKVLAPFIPFITENIYQRllphip 787
                  9*******************************9.566677************9999888666**********************************86 PP

  Anticodon_1  92 eeeelgkkesimlaewpe.kaeel.ekeleeeevellkeivkairklrselkikpsselkv 150
                  e+ e ++ +s++   +p   +e l ++e  e+ v +++++++++r  r++ +i+ +++lk 
   KHJ35117.1 788 ETLEGEDTRSVHFLRYPGvREE-LfDPEV-ERRVGRMQRVIELARVSRERRTIGLKTPLKS 846
                  44333556*********95554.458888.89************************99875 PP

>> tRNA-synt_1g  tRNA synthetases class I (M)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   6.8e-09     3e-05       8      70 ..      42     105 ..      40     188 .. 0.74
   2 !   10.5   0.0   4.1e-05      0.18     167     239 ..     394     469 ..     368     477 .. 0.83
   3 !    9.7   0.0   7.2e-05      0.32     313     373 ..     583     645 ..     561     657 .. 0.74

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 6.8e-09
                   B--SS---HHHHHHHHHHHHHHHHHHHTT-EEEEEEEE---SHHHHHHHHH.TTS-HHHHHHHH CS
  tRNA-synt_1g   8 pYangklHlGhllevisaDifaRykrlrgeevlfvcgtDehGtpielkAek.egvtpeelvekv 70 
                   p+a+g +H Ghll   + Di+ Ry  ++g +v    g D+hG pie + +k  gv+ ++ v k+
    KHJ35117.1  42 PFATGLPHYGHLLASTIKDIIPRYWSMKGFHVERRFGWDTHGLPIEHEIDKkLGVSGKDAVMKF 105
                   7899*********99999****************************997651588877766554 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 4.1e-05
                   ..........EEE.EEEEEE-GGGGHHHHHHHH.HH-TTSHHHHHHHH.HHHHT----EE-ESS-SSS-EET....T CS
  tRNA-synt_1g 167 pksaisgskpevketehlffklskfekklkewieeeekeleenvkkivkewlkegLkdlaisrdldwGipvP....g 239
                   p +  s++  ++++  ++f ++ ++  k+ + ie ++   +   +k   +w+ +  +d+++sr+  wG p+P    +
    KHJ35117.1 394 PMCPRSDTPLIYRTVPSWFIRITDIIPKMIKNIEGSHWVPTFVKEKRFTSWIAN-ARDWNVSRNRYWGTPIPlwvsD 469
                   67777888889999999**********99999*77775566666778899**99.9****************66552 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 7.2e-05
                   S-EEEE--EE.E--------------HHHHHHHH-HHHHHHHHHH.HS-TTS-EEE-HHHHHH CS
  tRNA-synt_1g 313 kkvvaheylt.vegkKlSkSrgvvvkakealerldadllRYylaa.eapekkDldfswedfve 373
                   k+ v+++ +   +gkK+Sk  ++  +++ ++ ++ +d+lR y++   a + + l f+++ + e
    KHJ35117.1 583 KNCVVNGIILaEDGKKMSKRLKNYPDPTLIISKYGSDALRLYMINsPALKAEPLRFKEAGVKE 645
                   555666655405689***************************998344445556666666555 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0      0.97   4.4e+03      20      48 ..      45      73 ..      34      74 .. 0.83
   2 ?   11.0   0.0   4.3e-05      0.19     247     299 ..     592     646 ..     574     648 .. 0.77
   3 ?   -3.4   0.0       1.1   4.7e+03      85     148 ..     960    1025 ..     945    1033 .. 0.68

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.97
                  TS--BHHHHHHHHHHHHHHHHHHHTT-EE CS
  tRNA-synt_1e 20 ydashlGhaRslvafDilrrilqalgYdv 48
                      h Gh  +  + Di+ r+  ++g++v
    KHJ35117.1 45 TGLPHYGHLLASTIKDIIPRYWSMKGFHV 73
                  567899***9999********99999988 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 4.3e-05
                   EEETTBE--TTTT---BHHHHHTTS-HHHHHHHHHSS-..TTS-EEE-HHHHHHH CS
  tRNA-synt_1e 247 lkiegekmsksLknfitikdvlkkfdprqlRllllsah..yrsqldfkeelleea 299
                   l  +g+kmsk Lkn+     ++ k+ + +lRl++++      ++l fke  ++e+
    KHJ35117.1 592 LAEDGKKMSKRLKNYPDPTLIISKYGSDALRLYMINSPalKAEPLRFKEAGVKEV 646
                   445799***************************9976411456888888877766 PP

  == domain 3  score: -3.4 bits;  conditional E-value: 1.1
                    HHHHHTT----SB--B.GGGG.HHHHHHHHHHHHHTTSEEE-TTS-EEE-GGG-TTTTTTTT--HH CS
  tRNA-synt_1e   85 kdleaLnvlkptlepr.vsek.vdeiielvekliekgyaYavsdgdvyfdvskkeeYgklskqnle 148 
                    +d + L +l ++l p  v e    eii+ +++l +k    +++d +++++  +++e + l+k   e
    KHJ35117.1  960 TDNDVLIILDAELYPDlVNEGlAREIINRIQRLRKKAGLVPTDDVKMQYQILSDPEDTGLAKAFAE 1025
                    555566666666666523333146899999999999888888887888887777766666665555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1078 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       561  (0.0312901); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.79u 0.30s 00:00:01.09 Elapsed: 00:00:00.47
# Mc/sec: 6884.36
//
Query:       KHJ35118.1  [L=528]
Description: putative trna (uracil-o -)-methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.2e-41  139.5   0.1    8.9e-41  138.7   0.1    1.3  1  AdoMet_MTase     Predicted AdoMet-dependent methyltransferase
     0.0023   17.9   0.0       0.02   14.9   0.0    2.2  1  Methyltransf_32  Methyltransferase domain
  ------ inclusion threshold ------
      0.017   15.0   0.0      0.031   14.1   0.0    1.4  1  Methyltransf_23  Methyltransferase domain


Domain annotation for each model (and alignments):
>> AdoMet_MTase  Predicted AdoMet-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  138.7   0.1   1.5e-44   8.9e-41       6     112 .]     220     326 ..     215     326 .. 0.97

  Alignments for each domain:
  == domain 1  score: 138.7 bits;  conditional E-value: 1.5e-44
  AdoMet_MTase   6 kyndlykelkqkyakrlvenwvestdplkfvfedlaiaaylivlwkktrseeketsfvdvgcgngllvyvlaaegykgygidlrkrklwelypaevk 102
                     +++y  lk ky+++l+enwvestdp+k+vfedl iaa+li+lw++ + ++k   fvd+gcgngllv++l  egy g+g+d+r rk+w++y +  +
    KHJ35118.1 220 IVQNTYSRLKLKYSRKLIENWVESTDPTKHVFEDLGIAAFLIELWNEIYKDKKFPGFVDIGCGNGLLVHILREEGYTGWGFDARYRKSWSTYSKLNQ 316
                   56899******************************************************************************************** PP

  AdoMet_MTase 103 vdliekvvvp 112
                    +l+e v++p
    KHJ35118.1 317 ENLKEMVLIP 326
                   *****99987 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.0   3.3e-06      0.02      10     156 ..     257     428 ..     254     430 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 3.3e-06
  Methyltransf_32  10 aelvakllkelakesgaltvvDvGaGkgYLsfvlalkekeyklkvvgidakeelv.ekaekraeklgkkfnkrlsfaelsieeatssktltkkv 102
                      a+++ +l +e+ k+++    vD+G+G+g L  +l     e ++   g+da+ + + ++ +k++++  k++   + f   si++ + ++   +++
       KHJ35118.1 257 AAFLIELWNEIYKDKKFPGFVDIGCGNGLLVHILRE---E-GYTGWGFDARYRKSwSTYSKLNQENLKEM-VLIPFLIDSITTCIPEAIDASEI 345
                      5677777888888999999****************9...5.88999***996654144456666655555.56666666666666555444444 PP

  Methyltransf_32 103 e...............................aeeekeeqeekesvdvligLHaCdtltdtalrlalekeakllvlvpCCyhela 156
                      e                               + + + ++    + +++i+ Ha d+lt+ +  la ++++ ++v +pCC h+l+
       KHJ35118.1 346 EalssctssctwdsirekmmfdsttirkinrdNPNLEIHSGIFPKNVFIISNHA-DELTPWTPLLATASQSSFIV-IPCCSHDLN 428
                      49999999**************99999987543333333444456778899999.99999999999999988875.8****9997 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.0   5.2e-06     0.031      25      54 ..     275     304 ..     254     362 .. 0.87

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 5.2e-06
  Methyltransf_23  25 rvLdiGcGtGillevlrengfsvtgvDlsp 54 
                        +diGcG G l  +lre+g++  g+D++ 
       KHJ35118.1 275 GFVDIGCGNGLLVHILREEGYTGWGFDARY 304
                      568************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (528 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      404  (0.0225333); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.22s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3934.01
//
Query:       KHJ35119.1  [L=1041]
Description: putative centrin-binding protein sfi1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.8e-100  336.5  63.1   2.8e-100  336.5  63.1    1.9  2  Sfi1      Sfi1 spindle body protein


Domain annotation for each model (and alignments):
>> Sfi1  Sfi1 spindle body protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.2      0.22   3.9e+03     147     185 ..     107     145 ..     106     154 .. 0.74
   2 !  336.5  63.1  1.6e-104  2.8e-100       2     569 ..     365     925 ..     364     926 .. 0.99

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 0.22
        Sfi1 147 lrenrereqeaeakrkrlllqkalqiwserseevqaaea 185
                 +++++e+e+e+e +r +++l+++  +   +++ ++a+++
  KHJ35119.1 107 FDQLSEEEEETEFHRIKTSLENFSTKFTFKTQPQYAQTS 145
                 667889999999999999999999998777776655544 PP

  == domain 2  score: 336.5 bits;  conditional E-value: 1.6e-104
        Sfi1   2 leekrqaaeterfferlerrAerardlylltkafthWaqltseevertsaarrhiLrkkyfnaWreltavnelKaqrfalkkplkkWkartkeieeree 100
                 +++kr+++ +er+f++le +A++ardlyll  +f+hW + t e+++ t+  r+hi+++++fnaWr++tav+elK++r +lk+++ ++k+ +  i+e+ +
  KHJ35119.1 365 VRNKRKERCNERYFNHLEISAKKARDLYLLYVSFSHWSNFTMERIQLTAKTRKHIIQNRMFNAWRDITAVDELKVKRQILKRIFFTLKSHHSSIKEKIK 463
                 5789*********************************************************************************************** PP

        Sfi1 101 kavqvykqkllkrsywkwfwefkerraekwrderlkrrsllkWlrklrenrereqeaeakrkrlllqkalqiwserseevqaaeaeadsllrqkllrrv 199
                  a+  yk++++++ +++w+ +f   r+ +wr e+l + +l++W +k r   ++++ ae  r++ +  +++  w  r+++  ++e++a++++ +k+ +++
  KHJ35119.1 464 AANISYKSNITQKYFNTWIHKFLTIRIITWRTENLVNLILTEWISKSRFIGNQKNIAEISRQKKICVNTIVFWILRTKKSLEEEERARQFYINKISKNY 562
                 *************************************************************************************************** PP

        Sfi1 200 leewrkqarlepalrqvsakkdtrllksalesWkkrlemsrqarevdrtrllrnaltsWndelrlkalreriderillealykWvleeRlrlfqrireq 298
                   ++ k+a l  a +++++++  r + ++++ W ++++++r a + dr+r+l++alt W+ ++r  ++r + d+ i+  ++y+W+l +R  l  rir++
  KHJ35119.1 563 TRKLCKEAVLMTAKNKIQNQIVLRQVGNIFSFWINQARNERIAIATDRMRILHEALTNWRYKTRALLFRLKLDNCIIERTIYTWILCARTNLAIRIRDE 661
                 *************************************************************************************************** PP

        Sfi1 299 rlkrevlstlvtntretrtrllqaeeeaeehrkekllrsvlekwreklaeqrereeeAsefyaprlaqecldawkerlqhvqklekwakdarfyflatk 397
                 +  r++   +  +++  +++  q+e  a+e+ ++++ + vl +w++ + +  +++      y+pr+++  +++w +  qh+ kle w++da f++l+++
  KHJ35119.1 662 NYLRDMTHLWNLKFQALKKNHSQQETLAREVLARRMKNFVLLRWYSCMGRLPQAKMLDLSPYKPRILKFFIQKWINDIQHLHKLERWSHDAGFFLLVSR 760
                 *************************************************************************************************** PP

        Sfi1 398 aLkkWrkateesrreRrrdayaqvrrkvkinLaskalnaWrskaaevaalsqqaeqleqeklleaaielldkWrektlerkkraeeadelyaeqlleka 496
                  + +W++ate +rr++r+  ya+vrr  k+nLa+ +l+ W +k+ ++  l+ q ++++q++++     ++  W+        ++ e++ ++++  l+k+
  KHJ35119.1 761 IMRRWKSATERTRRNKRKYLYARVRRMTKMNLARHVLRIWARKTGNILYLKSQVTEINQSRMIFLKKYIFYSWHCYN----DELLELKIMWQKNSLQKY 855
                 **************************************************************************999....****************** PP

        Sfi1 497 larwkerlrelqeleeqAeqveaekqlsiasaaLkklslrlfqikskeetAealrernerkhvRnmlrhWlqr 569
                 +a+w+++++++ +l  +A  +++e+q s +   Lkk+slr +++++ e++A++ +++++rk +R+++ +W+q+
  KHJ35119.1 856 VANWQDKTKNILALGLEAIIIYKESQISKI---LKKWSLRSLHVRAYENSATEIHDKKTRKKMRKLIIFWHQQ 925
                 ******************************...***************************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1041 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1305  (0.0727871); expected 358.6 (0.02)
Passed bias filter:                      375  (0.0209158); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.72u 0.31s 00:00:01.03 Elapsed: 00:00:00.46
# Mc/sec: 6835.10
//
Query:       KHJ35120.1  [L=351]
Description: putative c6 zinc finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-08   34.4   7.2    2.5e-08   33.9   7.2    1.2  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.9   7.2   1.4e-12   2.5e-08       2      39 ..     117     158 ..     116     159 .. 0.95

  Alignments for each domain:
  == domain 1  score: 33.9 bits;  conditional E-value: 1.4e-12
                 S-HHHHHCT---ST..SSSS..-HHHHHCTHHHCCCCTCCCE CS
     Zn_clus   2 aCdnCrkkKvKCda..kkPa..CsnCkklnleCtfysesskr 39 
                 aC  Cr++K++C++  ++P   C nC++ + eC f + ss+ 
  KHJ35120.1 117 ACRYCRRRKIRCSGfdQNPDgrCLNCQRFQQECIFTPVSSQA 158
                 9******************9**************99999885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (351 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       386  (0.0215294); expected 358.6 (0.02)
Passed bias filter:                      212  (0.0118244); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 2534.06
//
Query:       KHJ35121.1  [L=470]
Description: hypothetical protein EV44_g3762 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.039   14.6   3.7       0.17   12.5   3.7    2.1  1  HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interac
      0.065   12.6   1.6       0.19   11.0   1.6    1.7  1  DUF3810         Protein of unknown function (DUF3810)
       0.33   10.8   4.4         16    5.4   2.0    2.7  2  DUF2570         Protein of unknown function (DUF2570)
        1.6    8.7   5.2        1.1    9.3   1.3    2.4  2  DUF1664         Protein of unknown function (DUF1664)


Domain annotation for each model (and alignments):
>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   3.7   3.9e-05      0.17      20      83 ..      22      85 ..      12      93 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.9e-05
  HIP1_clath_bdg 20 qaqeeverekkeleeelerlkeeaerkleeqkeelekLkreleakraelarlkssLesseqsge 83
                      q ++   +k+++ee+ ++++  e+k e qke+ +k+ +e+ ++ ++l++  ++L+ +  + +
      KHJ35121.1 22 TFQADIIDGQKQTKEEFMKITNRLEEKFESQKENSDKVTNEILSQLKNLSTTLTALSAKVDAPK 85
                    5577888888888888888888888888888888888888888888888887777777665554 PP

>> DUF3810  Protein of unknown function (DUF3810)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   1.6   4.3e-05      0.19      84     158 ..      20      89 ..      12      94 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.3e-05
     DUF3810  84 replserlglkkeeyseeelaelaeklveklnelreqverdeeevrkeakkaykklgeeypllsgfypkpKpllf 158
                 +e+++ ++ ++ +++++ee+ +++++l ek ++ +e+    +++v +e+ +++k+l+++ ++ls +   pK+l+ 
  KHJ35121.1  20 QETFQADI-IDGQKQTKEEFMKITNRLEEKFESQKEN----SDKVTNEILSQLKNLSTTLTALSAKVDAPKNLFS 89 
                 55666666.7789999***************999998....345***************************9876 PP

>> DUF2570  Protein of unknown function (DUF2570)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   2.0    0.0036        16      39      82 ..      17      57 ..       8      88 .. 0.74
   2 ?    4.8   0.0    0.0053        24      22      82 ..     150     210 ..     143     214 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0036
     DUF2570 39 ieeqqkanqrLteqLeqerqavekqqkianelkakveeekeevk 82
                i++q+       + ++  +q  e+  ki+n l++k e +ke+  
  KHJ35121.1 17 IKNQETFQA---DIIDGQKQTKEEFMKITNRLEEKFESQKENSD 57
                444444433...34556788999999999999999999988743 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.0053
     DUF2570  22 sqkidsLraenkaqaqlieeqqkanqrLteqLeqerqavekqqkianelkakveeekeevk 82 
                 s+   sLr  nk+   +   q+ + +   ++L+ e    ++q + +++ +++v  +++++k
  KHJ35121.1 150 SSFYSSLRQKNKTPPTMYSSQESVTEISSNNLQEENHGNINQYRTQKKPRTHVTDQEKKIK 210
                 566789**********************************999999999999999999988 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   1.3   0.00025       1.1      56      98 ..      30      72 ..       5      97 .. 0.68
   2 ?    0.3   0.1      0.15   6.9e+02      42      77 ..     413     450 ..     404     470 .] 0.46

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00025
     DUF1664 56 slaatkrhLssridrvdkkldeqkeiskeikeevtevredlse 98
                  ++tk+++++  +r+++k ++qke s ++++e+ +  ++ls+
  KHJ35121.1 30 GQKQTKEEFMKITNRLEEKFESQKENSDKVTNEILSQLKNLST 72
                4468899999999999999999998888888777654444443 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.15
     DUF1664  42 avesvskqleqv.seslaatkrhLssridr.vdkklde 77 
                  ++++sk+l q  s+ ++   +++++ i + + ++l++
  KHJ35121.1 413 PIAKMSKHLSQNpSHVINVESKDITQTIVNyMTHTLQN 450
                 34555555554413334444455555543313334433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1824  (0.101735); expected 358.6 (0.02)
Passed bias filter:                      695  (0.038764); expected 358.6 (0.02)
Passed Vit filter:                        85  (0.00474092); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.60u 0.31s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 3245.88
//
Query:       KHJ35122.1  [L=315]
Description: hypothetical protein EV44_g3756 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.6e-06   26.8   2.6    5.5e-06   26.2   2.6    1.3  1  zf-CCHC    Zinc knuckle
  ------ inclusion threshold ------
      0.019   14.9   2.3      0.042   13.8   2.3    1.5  1  zf-CCHC_3  Zinc knuckle
      0.023   14.4   0.9      0.052   13.3   0.9    1.5  1  zf-CCHC_5  GAG-polyprotein viral zinc-finger
      0.061   13.3   2.7       0.18   11.8   0.5    2.1  2  MCRS_N     N-terminal region of micro-spherule protein


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   2.6   1.2e-09   5.5e-06       2      17 ..     205     220 ..     204     221 .. 0.94

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 1.2e-09
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +Cy+CG+ GH+a++C+
  KHJ35122.1 205 TCYKCGKQGHYANNCK 220
                 8**************7 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   2.3   9.4e-06     0.042       3      23 ..     202     231 ..     201     243 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 9.4e-06
   zf-CCHC_3   3 asaaCQkClkkGHwtYECkn.........a 23 
                 +s++C kC+k+GH++  Ck           
  KHJ35122.1 202 KSVTCYKCGKQGHYANNCKLydshsskppH 231
                 6789***************66654444443 PP

>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.9   1.2e-05     0.052       5      19 ..     206     220 ..     203     221 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.2e-05
                 -TTT-SSBS-TTT-- CS
   zf-CCHC_5   5 CpRCkkgkHwardCh 19 
                 C +C+k  H+a++C+
  KHJ35122.1 206 CYKCGKQGHYANNCK 220
                 **************7 PP

>> MCRS_N  N-terminal region of micro-spherule protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.2     0.046   2.1e+02      59     139 ..      62     139 ..      56     183 .. 0.76
   2 ?   11.8   0.5   4.1e-05      0.18      73     174 ..     189     302 ..     162     307 .. 0.66

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.046
      MCRS_N  59 lrnLhpevvasvqkkalfskeeeellatiksteqptlekfqeLldknaavfypsrtaksLeahwqllkqyqLLpdqsvqpl 139
                 l+nL   +v+  ++++ fs++  +l++ + s +    e+ +e+++++   f+  rt +++++h   l + +L +d+ vq +
  KHJ35122.1  62 LSNLARLAVTPGESSLQFSRKLRKLIFALPS-DVLLREQAREVIQQHVRQFL-PRTWTYIQQHTSSLPNDEL-ADRIVQIT 139
                 5666666666677788888888888888887.44455788899999999988.5889999998888877664.55555555 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 4.1e-05
      MCRS_N  73 kalfskeeeellatikst....eqptlekfqeLldknaa......vfypsrtaksLeahwqllkqyqLLpdqsvqplqkedkvllsfs.daeeelddse 160
                 +   s++e+  +++  +     +q + ++  +L+d++++         + r++++L++ ++ lk+ ++ ++q+ +p q+++k ++ +s + +++++ ++
  KHJ35122.1 189 NNSDSQDEQAFISKSVTCykcgKQGHYANNCKLYDSHSSkpphnsYPKTKRFSNKLRDRYVALKKRGFGKNQTYKPNQQSRKEVSFVSaQYNDDVNSKS 287
                 445566666666665544455566666666666666543111110234579*************************99988774444424456666655 PP

      MCRS_N 161 .lsesedevleaele 174
                  +++ +++ ++ e+e
  KHJ35122.1 288 tVDQLDNDEIDDEIE 302
                 488999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (315 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1072  (0.0597914); expected 358.6 (0.02)
Passed bias filter:                      578  (0.0322383); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2279.45
//
Query:       KHJ35123.1  [L=369]
Description: putative 3-isopropylmalate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.8e-120  401.6   0.0   3.2e-120  401.4   0.0    1.0  1  Iso_dh    Isocitrate/isopropylmalate dehydrogenase


Domain annotation for each model (and alignments):
>> Iso_dh  Isocitrate/isopropylmalate dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  401.4   0.0  1.8e-124  3.2e-120       1     348 []       5     357 ..       5     357 .. 0.98

  Alignments for each domain:
  == domain 1  score: 401.4 bits;  conditional E-value: 1.8e-124
                 EEEEEEESTTHHHHHHHHHHHHHHHHHHHT..-EEEEEE---THHHHHHHSSSS-HHHHHHHHHSSEEEEEE---CS..SSSSSHHHHHHHHHHHTTEE CS
      Iso_dh   1 kiallegdgiGpevveaalkvlkaakekag..lelefeevdvGgaaidetgeplpeetleaikeadvvllgavgtpk..ekevrpengLlaLrkeldlf 95 
                 +i+++ gd +Gpev+++alk++k +++ ++   +++f+e+ +Gg +id+tgepl+ ++lea+k+ad+vllga+g+pk   ++vrpe+g+l+Lrke++++
  KHJ35123.1   5 NIVIFAGDYCGPEVTAEALKIFKVIEALRPsaGKFQFHEHLLGGCSIDATGEPLTLQALEAAKAADAVLLGAIGGPKwaTSTVRPEQGILTLRKEMGTY 103
                 58999******************9999988779*********************************************999****************** PP

                 EEEEEEE-B.CCTTCCSSBTHHHHCT-EEEEEEE-SSCGGCSSEEEEETTG.GGGEEEEEEEEEHHHHHHHHHHHHHHHHHT.TTSEEEEEESTTTTHH CS
      Iso_dh  96 anlrpvkvf.eklkvksplkrevveevdlvivReltggiYfgeekekkgsifteevavdtklyseeeieriaraafelAlkr.gkkkvtlvdKanvlks 192
                  nlrp++++ e+l+++splk+ v++++d+ i+Reltgg+Yfg++ke++g +     a+dt++ys+ eieri r+a++lAl++ ++ +v+++dKanvl+s
  KHJ35123.1 104 GNLRPCNFAsESLVESSPLKESVCRGTDFNIIRELTGGLYFGQRKEDDGDG----FAWDTEQYSRYEIERITRLAAHLALQSvPPLPVWSLDKANVLAS 198
                 *********9***************************************87....9**************************99*************** PP

                 HHHHHHHHHHHHCCTTTTSEEEEEEHHHHHHHHHHSG.GGGSEEEE-HHHHHHHHHHHHHHTTSGCC-EEEEEET......SS-EEEEESS---CCCTT CS
      Iso_dh 193 selwrkiveevaeeeypdielehqlvDsaamqlvksp.kqfdVivtkNlfGDilSDeaaalvGslGllpSaslge......kkvaifEavHGsapdiag 284
                 s+lwrk+v+ev+e+e+p++++ h l+Dsaam ++k+p + +++ivt+NlfGDi+SDea++++Gs+GllpSasl+       +  +i+E++HGsapdi+g
  KHJ35123.1 199 SRLWRKVVTEVMEKEFPQLKIGHHLIDSAAMLMIKNPrALNGIIVTSNLFGDIISDEASVIPGSIGLLPSASLAGvpdgktRCNGIYEPIHGSAPDISG 297
                 *************************************77778*******************************99999999899*************** PP

                 SS-S-THHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHHTSCCHHHCTTSTCCCHHHHHHHHH CS
      Iso_dh 285 kdkaNpiavilSaalmLryslgleeaAdkiekAvekvleagivTkDlageaakevstsefgdav 348
                 ++++Npi++ilS+++m +ysl l  +A++ie+Av++++++gi+TkD++g++    +t e+gdav
  KHJ35123.1 298 QGIVNPIGTILSVSMMFKYSLCLPLEAKAIEEAVKHTIDDGIRTKDIGGSN----TTIEVGDAV 357
                 ***************************************************....999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       275  (0.0153383); expected 358.6 (0.02)
Passed bias filter:                      270  (0.0150594); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2763.90
//
Query:       KHJ35124.1  [L=590]
Description: putative ku70 ku80 n-terminal alpha beta domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.9e-31  108.4   0.0    7.5e-31  107.4   0.0    1.4  1  Ku        Ku70/Ku80 beta-barrel domain
    4.1e-08   33.2   0.1    1.1e-07   31.9   0.1    1.6  2  Ku_N      Ku70/Ku80 N-terminal alpha/beta domain
    1.9e-06   28.2   0.2    4.2e-06   27.1   0.2    1.5  1  VWA       von Willebrand factor type A domain


Domain annotation for each model (and alignments):
>> Ku  Ku70/Ku80 beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.4   0.0   1.3e-34   7.5e-31       4     187 ..     246     453 ..     244     472 .. 0.85

  Alignments for each domain:
  == domain 1  score: 107.4 bits;  conditional E-value: 1.3e-34
          Ku   4 gvsipVklykateeakkpkfkkldketnepvkvetkyvcsdtg.............................e.vdeedivkgyeyGgevvpltkeele 72 
                  +s++Vk y +t++ak+p+ +++  +t     v+ + v++ tg                             + v+ +d+ kgy yG+++vp+++ +  
  KHJ35124.1 246 SISFDVKRYFKTKSAKPPSASQYVIKTPIAANVNDNQVDQATGnkfvnsgdlsivrnarsytvndplcpggkKdVSIDDLAKGYLYGRTIVPMNEADEG 344
                 689*******************99999998899999999998557777788888888888888888888888669999*******************99 PP

          Ku  73 ..kiksfdskglkllgFvplseilkeylsikssyfiyPddkdekgstkafsaLveamleskkvaivrfvlrskskprlvaLvPqeeelsseeekeglvl 169
                   k+ +   ++++++gF+p +e  ++y++  +s + ++++ ++  ++ a+s+Lv+a+ e++ +ai+r+v++++  p++v L P  +  +     e+lv 
  KHJ35124.1 345 vtKFDT--IQSFTIIGFIPVDE-YDIYMNMGESCITVAQQHNDP-ARLAMSSLVHALHELESYAIARIVSKNSKDPSIVLLAPLIKPGE----LEALVD 435
                 434444..79************.999999999999999666666.566************************************33333....37**** PP

          Ku 170 vtLpfaddiRslkfpsld 187
                 v+Lpfa+d+R+ +fp+ld
  KHJ35124.1 436 VPLPFAEDVRTHRFPPLD 453
                 ****************92 PP

>> Ku_N  Ku70/Ku80 N-terminal alpha/beta domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.9   0.1   1.8e-11   1.1e-07       1     160 [.       6     175 ..       6     203 .. 0.77
   2 ?   -2.2   0.0      0.49   2.9e+03      68      88 ..     213     233 ..     187     248 .. 0.78

  Alignments for each domain:
  == domain 1  score: 31.9 bits;  conditional E-value: 1.8e-11
                 EEEEEEE-SHHHHCTTCCSCC.HHHHHHHHHHHHHHHHHHCTCS.EEEEEEEESSSSTBS...TTTCTTEEEEEECCCHHHHHHHHHHCCHHHCCHHHH CS
        Ku_N   1 avvfviDvspaMfesskeees.pfelalkciaellkrkvisrsk.DlIavvlygtdesen...keqlenitvlreldlpdaellkelkqivesedasve 94 
                 a+++viDv+ ++ e  ++  +  ++ +lk+  + +++ + ++++   ++v+ + td++ n   +e++eni  l++l +  +  ++e+ +++ +      
  KHJ35124.1   6 ATIYVIDVGSTTKELHNGRCEsDLNFSLKYFWSKIAETMATNRStLSVGVIAFRTDNTLNplaSEGYENISILKSLGKMEMADVEEIRSKLIP------ 98 
                 69************88887666********************99456**********************************************...... PP

                 CCCTTSS-TTHHHHHHHHHHHHHH.TTSSE.....SEEEEEEEESSSSTCCGHHHHHHHHHHHH.........HHHHHHCT CS
        Ku_N  95 glaedssqasllsaLivclellqk.vgkkl.....skkriflftdlddpfedsdklelilqklk.........akDlrder 160
                    ++ + ++  sa+ v+++ + k +++k       k++i+l+td      d++  ++i+ k           + D  d++
  KHJ35124.1  99 ---SSTETGDAISAIVVAIAEIIKfTQLKSgrpgkFKRKIVLITDGQGIN-DYEGSDEIIRKINesdielvviGIDFDDTD 175
                 ...77788888888888876533335555422222789*******99999.899999999886633334444433333333 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 0.49
                 EEECCCHHHHHHHHHHCCHHH CS
        Ku_N  68 lreldlpdaellkelkqives 88 
                 ++++ +p+++ lk +  ++ +
  KHJ35124.1 213 IQQTSKPSVKTLKAFLTYEGP 233
                 789999999999999999887 PP

>> VWA  von Willebrand factor type A domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.1   0.2   7.1e-10   4.2e-06      17     171 ..      29     196 ..      24     200 .. 0.65

  Alignments for each domain:
  == domain 1  score: 27.1 bits;  conditional E-value: 7.1e-10
                 HH.HHHHHHHHHHHHHTBTTTTEEEEEEEESSS.............EEEEEETTSHCHHHHHHHHHHTG..SGGGGSSC-HHHHHHHHHH......HHH CS
         VWA  17 fe.kvkefikklveklevgpegtrvglvqfsse.............vktefslndysskeellsalnnl..kysgggttntgkalkyale......klf 93 
                 ++ + k f +k++e +  ++ + +vg++ f ++             + +  sl +++     + +++++  k ++++t  tg+a+++ +       k+ 
  KHJ35124.1  29 LNfSLKYFWSKIAETMATNRSTLSVGVIAFRTDntlnplasegyenISILKSLGKME-----MADVEEIrsKLIPSSTE-TGDAISAIVVaiaeiiKFT 121
                 555778899999999999999999999999966444444444322233333333333.....33333335466667776.7777776666555666333 PP

                 HHHGTSST.TSEEEEEEEESS--.CS.SHTHHHHHHHHGCTEEEEEEEESSSHHHHHHHHHSSSSCHHCEEEESSHHHHHH CS
         VWA  94 kssagaRe.nakkviilltdGks.nd.gdpkeaaneakeqgikvfavGvgnadekelLnkiasepgeghvftvtdfeelee 171
                 + ++g R+ + k+ i+l+tdG+  nd +  +e ++++ e++i+++++G++ +d++      + +++e+ + + +++++l++
  KHJ35124.1 122 QLKSG-RPgKFKRKIVLITDGQGiNDyEGSDEIIRKINESDIELVVIGIDFDDTDF-----GFKEEEKSFLKEQNESSLQD 196
                 34444.556*************99996699*******************8887765.....33333335555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (590 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 4026.22
//
Query:       KHJ35125.1  [L=727]
Description: putative golgi membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-83  280.0   0.9    1.5e-83  280.0   0.9    3.6  3  CASP_C         CASP C terminal
  ------ inclusion threshold ------
       0.03   14.0   2.7      0.037   13.7   0.1    2.4  2  DUF4956        Domain of unknown function (DUF4956)
        0.7   10.1   3.5        2.8    8.2   0.0    3.8  4  T3SS_needle_F  Type III secretion needle MxiH, YscF, SsaG, Ep
        1.7    9.3   0.0        1.7    9.3   0.0    6.4  7  SlyX           SlyX
        2.5    9.0   0.0        2.5    9.0   0.0    5.2  6  DUF4482        Domain of unknown function (DUF4482)
        5.3    6.9   6.5       0.78    9.6   0.4    2.9  3  Orthopox_B11R  Orthopoxvirus B11R protein
        6.9    6.7  32.5          2    8.5   1.3    6.1  6  DUF1664        Protein of unknown function (DUF1664)


Domain annotation for each model (and alignments):
>> CASP_C  CASP C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   1.0      0.34   8.7e+02      81     111 ..      24      76 ..       5      93 .. 0.57
   2 ?   -7.2  19.3         7   1.8e+04       3     116 ..     160     287 ..     158     366 .. 0.60
   3 !  280.0   0.9   5.8e-87   1.5e-83       1     250 [.     434     695 ..     434     697 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.34
      CASP_C  81 s.......................essiLpivtsQRDRFrkrnaeLEeelrkqe 111
                 +                       +s+   i++ QRD   +r +eL +  ++ +
  KHJ35125.1  24 EtnkfqkaisawrnfdltslipslDSTATRIIQYQRDCTIQR-KELSQRTKEFR 76 
                 111233344444555555567777999999999999977666.46655555544 PP

  == domain 2  score: -7.2 bits;  conditional E-value: 7
      CASP_C   3 lqeelseleaeleeqkeLnekLEndllkvqseasnas.kasdassagsevsrka.ese........gr...ksptssiisgaeesesaesss.....es 83 
                 l+++l+ +e ++e +++L ++LE+ +++  +e + ++ +  ++++++ e+++k  e++        ++   + + s   +++e++++    s      +
  KHJ35125.1 160 LTTQLEGAELKVEAERKLRQSLEETVEAKVKEVEVSWtEVLEENKHNWETKEKFlEEKiesqeqilKEikaSYEVSRRLGESEQNGN----SegshvTN 254
                 566777777777777777777777775444443333302222222222222222222133334444113322222222222222222....12345699 PP

      CASP_C  84 siLpivtsQRDRFrkrnaeLEeelrkqeetvss 116
                   L+++ s  +R  +r ae+E+  ++ + ++ +
  KHJ35125.1 255 AELEMISSDLERTNARLAEVEARNEQLRLELAR 287
                 99*******************998888766543 PP

  == domain 3  score: 280.0 bits;  conditional E-value: 5.8e-87
      CASP_C   1 eklqeelseleaeleeqkeLnekLEndllkvqseasnaskasdassagsevsrkaese......grksptssiisgaeesesaesss..........es 83 
                 +k++eels +++ele+ ++Ln++LEndl++++++++ ++ +s++s++g++ +r+++s+        +sptssi+sg  +++s +  +          +s
  KHJ35125.1 434 QKMKEELSLANSELERVQNLNSTLENDLATINETNN-TF-SSSMSTTGNHLTRNTPSSsnitrkDGTSPTSSIVSGHIPKSSISPLEplkhgdspggNS 530
                 5799***************************98776.55.677888999999999664356543238*********999987776669999******** PP

      CASP_C  84 siLpivtsQRDRFrkrnaeLEeelrkqeetvsslraeiaslqkDNlkLYEkvRYlqsYnrgskastksssessssasalganpnassveagaeldkYrk 182
                 siLp++t+QRDRF+krn+eLE+el+++++t+sslr+ei+slq+DNl+LYEk+RYl++Ynr+++   + +   s ++s+ +  ++++s ++g +l++Yr+
  KHJ35125.1 531 SILPMITAQRDRFKKRNTELENELSESQSTISSLRHEITSLQRDNLNLYEKTRYLSTYNRAGSMV-SPALPFS-HDSNPSVLQTSNSASSGLTLNRYRT 627
                 ************************************************************99764.3333332.233333444555555689******* PP

      CASP_C 183 aYEeslnPfaaFrgrEseraykrLsllerlvlsltrlvlanrtsRnlflvYalaLHllvfltlyevss 250
                 aYE++++PfaaFrgrEs+  ykr+sl+er+++s+trlvla+r+ Rnlf+ Y+ +LHllvf++ly+++s
  KHJ35125.1 628 AYESKISPFAAFRGRESASSYKRMSLPERIIFSITRLVLATRMNRNLFAGYCAVLHLLVFFSLYWLGS 695
                 *****************************************************************986 PP

>> DUF4956  Domain of unknown function (DUF4956)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.1   1.4e-05     0.037     107     164 ..     146     202 ..     112     205 .. 0.90
   2 ?   -1.1   0.3      0.49   1.3e+03       8      56 ..     661     710 ..     657     712 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.4e-05
     DUF4956 107 allesprllkkerrklvtldrieliapedeeeliadleerlglkvteveveeidfvrd 164
                 + +e+++l k+ r+ + +l+    +++e e++l++ lee++++kv+evev   +++++
  KHJ35125.1 146 VTAENKNLQKTVRNLTTQLEG-AELKVEAERKLRQSLEETVEAKVKEVEVSWTEVLEE 202
                 578999999999********9.8889999*********************99998876 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.49
     DUF4956   8 lvrglYykrhrrrdlvftflllnvgvfavvlllasvevsig.lglGLfgv 56 
                 ++r++  +r +r+ ++   ++l ++vf+ ++ l sv+ +     +GL g+
  KHJ35125.1 661 ITRLVLATRMNRNLFAGYCAVLHLLVFFSLYWLGSVDCEQNvRKIGLAGI 710
                 566666667777777777788999*********99988766335666665 PP

>> T3SS_needle_F  Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0         2   5.1e+03      38      49 ..      27      38 ..      20      57 .. 0.69
   2 ?    8.2   0.0    0.0011       2.8      15      59 ..      64     107 ..      55     112 .. 0.88
   3 ?   -0.9   0.3      0.75   1.9e+03      12      28 ..     433     449 ..     425     482 .. 0.58
   4 ?   -3.9   0.0       6.7   1.7e+04      13      42 ..     548     560 ..     541     564 .. 0.47

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2
                   HHHHHHHCHHHH CS
  T3SS_needle_F 38 kvQfklqqYsvf 49
                   k+Q +++ + +f
     KHJ35125.1 27 KFQKAISAWRNF 38
                   678888888655 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0011
                    HHHHHHHHHHHHHHSTTXHHHHHHHHHHHHCHHHHHCHHHHHHHH CS
  T3SS_needle_F  15 aekelqdalealkadpsdPaaLakvQfklqqYsvfinaqStavKa 59 
                    ++kel+++ +    +++d+a+L+++ + l +Y+ fi++ ++ +K 
     KHJ35125.1  64 QRKELSQRTKEF-RKIEDSAKLVEIKALLKNYQSFIDFLTNHIKL 107
                    567888888888.899************************99995 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.75
                    THHHHHHHHHHHHHHHH CS
  T3SS_needle_F  12 vskaekelqdalealka 28 
                    ++k+++el+ a + l+ 
     KHJ35125.1 433 IQKMKEELSLANSELER 449
                    45555554444444432 PP

  == domain 4  score: -3.9 bits;  conditional E-value: 6.7
                    HHHHHHHHHHHHHHHHSTTXHHHHHHHHHH CS
  T3SS_needle_F  13 skaekelqdalealkadpsdPaaLakvQfk 42 
                    +++e+el++ +                 ++
     KHJ35125.1 548 TELENELSESQ-----------------ST 560
                    44444444443.................33 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.2       1.2   3.1e+03      26      53 ..      54      81 ..      46      87 .. 0.73
   2 ?    1.4   0.4       0.2   5.1e+02      29      55 ..     146     172 ..     136     186 .. 0.72
   3 ?   -0.0   0.1      0.55   1.4e+03       8      22 ..     214     228 ..     206     237 .. 0.70
   4 ?   -0.8   1.4      0.93   2.4e+03       7      50 ..     256     299 ..     254     313 .. 0.70
   5 ?   -0.5   0.1      0.75   1.9e+03      20      49 ..     331     360 ..     313     370 .. 0.72
   6 ?    2.7   0.5     0.078     2e+02      17      54 ..     431     468 ..     415     476 .. 0.74
   7 ?    9.3   0.0   0.00068       1.7       3      44 ..     545     586 ..     543     598 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.2
                HHHHHHHHHHHHHHHHHHHHT-XXXXXX CS
        SlyX 26 vaeqqqqidrlqrqlrllaerlkelees 53
                +++ q++ + ++++l + +++++++e+s
  KHJ35125.1 54 IIQYQRDCTIQRKELSQRTKEFRKIEDS 81
                6777777777778887777777777766 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.2
                 HHHHHHHHHHHHHHHHHT-XXXXXXXX CS
        SlyX  29 qqqqidrlqrqlrllaerlkeleessg 55 
                    + + lq+ +r l+ +l+ +e + +
  KHJ35125.1 146 VTAENKNLQKTVRNLTTQLEGAELKVE 172
                 556777899999999999976665544 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.55
                 HHHHHHHHHHHHHHH CS
        SlyX   8 LEiklafqedtieeL 22 
                 LE+k+  qe+ ++e 
  KHJ35125.1 214 LEEKIESQEQILKEI 228
                 677777777766664 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 0.93
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXX CS
        SlyX   7 eLEiklafqedtieeLndvvaeqqqqidrlqrqlrllaerlkel 50 
                 eLE+  + +e+t  +L +v a+ +q   +l r   l + + ++l
  KHJ35125.1 256 ELEMISSDLERTNARLAEVEARNEQLRLELARSTSLQVSQTANL 299
                 67777777777777777777777777766666666666555555 PP

  == domain 5  score: -0.5 bits;  conditional E-value: 0.75
                 HHHHHHHHHHHHHHHHHHHHHHHHHHT-XX CS
        SlyX  20 eeLndvvaeqqqqidrlqrqlrllaerlke 49 
                  e++  + + +++i+ l+++ + l+ ++++
  KHJ35125.1 331 REMDSKIRAFEREISLLKEERDNLKIKVQK 360
                 566666667778888888888888777765 PP

  == domain 6  score: 2.7 bits;  conditional E-value: 0.078
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-XXXXXXX CS
        SlyX  17 dtieeLndvvaeqqqqidrlqrqlrllaerlkeleess 54 
                 ++i+++ +++   + +++r q     l++ l++++e++
  KHJ35125.1 431 NQIQKMKEELSLANSELERVQNLNSTLENDLATINETN 468
                 57788888888888888888888888888887777766 PP

  == domain 7  score: 9.3 bits;  conditional E-value: 0.00068
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        SlyX   3 erleeLEiklafqedtieeLndvvaeqqqqidrlqrqlrlla 44 
                 +r +eLE +l+  + ti +L  +++  q++   l ++ r+l 
  KHJ35125.1 545 KRNTELENELSESQSTISSLRHEITSLQRDNLNLYEKTRYLS 586
                 67799************************9999999988875 PP

>> DUF4482  Domain of unknown function (DUF4482)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       2.8   7.1e+03      29      39 ..      65      75 ..      48      96 .. 0.55
   2 ?   -1.6   0.6       1.8   4.5e+03      28      60 ..     149     181 ..     143     197 .. 0.48
   3 ?   -0.2  10.8      0.64   1.6e+03      21      83 ..     196     263 ..     176     298 .. 0.61
   4 ?    3.8   6.2     0.039     1e+02      17      66 ..     311     360 ..     306     415 .. 0.79
   5 ?    0.0   0.4      0.56   1.4e+03      39      90 ..     429     481 ..     425     505 .. 0.45
   6 ?    9.0   0.0   0.00097       2.5      23      94 ..     541     612 ..     540     642 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.8
     DUF4482 29 Rkewesqwkel 39
                Rke  + +ke+
  KHJ35125.1 65 RKELSQRTKEF 75
                33333333333 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.8
     DUF4482  28 ERkewesqwkelqkkieeLqkevklrrkinmne 60 
                 E k+  + ++ l  ++e    +v+ +rk   + 
  KHJ35125.1 149 ENKNLQKTVRNLTTQLEGAELKVEAERKLRQSL 181
                 445555555555555554444444444422222 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.64
     DUF4482  21 LldrfdrERkewesqwkelqkkie...eLqkevk.....lrrkinmnerakviildkekvsqqkevesspk 83 
                   + +++++ +we + k l +kie   ++ ke+k       r     e+++  + + + v++++    s++
  KHJ35125.1 196 WTEVLEENKHNWETKEKFLEEKIEsqeQILKEIKasyevS-RR--LGESEQNGNSEGSHVTNAELEMISSD 263
                 5688999****************73335666666554432.22..23334444444444444444333333 PP

  == domain 4  score: 3.8 bits;  conditional E-value: 0.039
     DUF4482  17 EkmeLldrfdrERkewesqwkelqkkieeLqkevklrrkinmnerakvii 66 
                 E + Ll + +  R e + +++e+  ki    +e++l +++  n + kv +
  KHJ35125.1 311 ENASLLRKIEAARVERDTKTREMDSKIRAFEREISLLKEERDNLKIKVQK 360
                 8889*******************************999955555544443 PP

  == domain 5  score: 0.0 bits;  conditional E-value: 0.56
     DUF4482  39 lqkkieeLqkevklrrk.....inmnerakviildkekvsqqkevesspkspksgqs 90 
                 l ++i+++++e++l  +     +n n   ++ + d  +++++++  +s++  ++g++
  KHJ35125.1 429 LINQIQKMKEELSLANSelervQNLN---STLENDL-ATINETNNTFSSSMSTTGNH 481
                 66788888888886555110002222...2222222.22222222333333333333 PP

  == domain 6  score: 9.0 bits;  conditional E-value: 0.00097
     DUF4482  23 drfdrERkewesqwkelqkkieeLqkevklrrkinmnerakviildkekvsqqkevesspkspksgqsvpes 94 
                 drf +   e e++  e q  i+ L++e++  +  n n  +k+  l+      +  ++  p+s++s+ sv ++
  KHJ35125.1 541 DRFKKRNTELENELSESQSTISSLRHEITSLQRDNLNLYEKTRYLSTYNRAGSMVSPALPFSHDSNPSVLQT 612
                 89*************************9977666*******9999999999999999999999999997664 PP

>> Orthopox_B11R  Orthopoxvirus B11R protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.2       3.2   8.3e+03       8      17 ..     222     231 ..     211     254 .. 0.58
   2 ?   -2.7   0.1         2   5.1e+03       6      16 ..     363     373 ..     360     380 .. 0.70
   3 ?    9.6   0.4   0.00031      0.78       8      36 ..     427     456 ..     421     478 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 3.2
  Orthopox_B11R   8 ediineidre 17 
                    e+i+ ei   
     KHJ35125.1 222 EQILKEIKAS 231
                    4444444444 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2
  Orthopox_B11R   6 nvediineidr 16 
                    n e+i ne+d 
     KHJ35125.1 363 NYEEIKNELDI 373
                    77888888874 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.00031
  Orthopox_B11R   8 ediineidrekeei.lknveiennkninkn 36 
                     d+in+i++ kee+ l n e+e  +n+n  
     KHJ35125.1 427 TDLINQIQKMKEELsLANSELERVQNLNST 456
                    59***********879**********9975 PP

>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.1      0.74   1.9e+03      47     106 ..      51      78 ..      25     105 .. 0.57
   2 ?    3.6   5.5     0.025        65      35      87 ..     149     201 ..     141     234 .. 0.65
   3 ?    1.4   1.7      0.12   3.2e+02      50     118 ..     218     286 ..     194     292 .. 0.65
   4 ?    0.6   0.6      0.21   5.4e+02      81     112 ..     329     360 ..     304     378 .. 0.50
   5 ?    8.5   1.3   0.00076         2      67     122 ..     411     466 ..     394     483 .. 0.60
   6 ?    7.4   0.1    0.0016       4.2      56     103 ..     535     582 ..     530     589 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 0.74
     DUF1664  47 skqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesv 106
                 ++++ q + + + ++++Ls+r ++                                ++++
  KHJ35125.1  51 ATRIIQYQRDCTIQRKELSQRTKE--------------------------------FRKI 78 
                 233333333333334444444333................................3333 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.025
     DUF1664  35 TkrslsdavesvskqleqvseslaatkrhLssrid.rvdkkldeqkeiskeike 87 
                  +++l++ v ++++qle    +++a + +L + ++ +v++k++e++   +e+ e
  KHJ35125.1 149 ENKNLQKTVRNLTTQLEGAELKVEAER-KLRQSLEeTVEAKVKEVEVSWTEVLE 201
                 579999999999999999999997665.56666641577777776655444433 PP

  == domain 3  score: 1.4 bits;  conditional E-value: 0.12
     DUF1664  50 leqvseslaatkr..hLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskle 118
                 +e+  + l++ k   + s+r+   +++++ ++e s+ +++e++ +++dl++++  + +v++  e+l  +l+
  KHJ35125.1 218 IESQEQILKEIKAsyEVSRRLG--ESEQNGNSEGSHVTNAELEMISSDLERTNARLAEVEARNEQLRLELA 286
                 4444444554444112333333..35566778888889999999999999999999999988888876665 PP

  == domain 4  score: 0.6 bits;  conditional E-value: 0.21
     DUF1664  81 iskeikeevtevredlseigedvesvkeaveg 112
                  ++e+++++ + ++++s ++e+ +++k  v++
  KHJ35125.1 329 KTREMDSKIRAFEREISLLKEERDNLKIKVQK 360
                 23333344444444444444443333333333 PP

  == domain 5  score: 8.5 bits;  conditional E-value: 0.00076
     DUF1664  67 ridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskleriee 122
                 r +++ ++l       +++ +++++++e+ls  ++++e v+++ ++le+ l++i+e
  KHJ35125.1 411 RNKKISEELTVLRVSHTDLINQIQKMKEELSLANSELERVQNLNSTLENDLATINE 466
                 44444444444444455555566666666666666666666666666666655543 PP

  == domain 6  score: 7.4 bits;  conditional E-value: 0.0016
     DUF1664  56 slaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedv 103
                  ++a+++++++r  +++++l e++ +++++++e+t++++d  ++ e+ 
  KHJ35125.1 535 MITAQRDRFKKRNTELENELSESQSTISSLRHEITSLQRDNLNLYEKT 582
                 588999*******************************99987776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (727 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2035  (0.113503); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        38  (0.00211947); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.08u 0.31s 00:00:01.39 Elapsed: 00:00:00.49
# Mc/sec: 4437.80
//
Query:       KHJ35126.1  [L=224]
Description: putative malate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-37  127.6   0.0    7.1e-37  127.2   0.0    1.1  1  DUF3455   Protein of unknown function (DUF3455)


Domain annotation for each model (and alignments):
>> DUF3455  Protein of unknown function (DUF3455)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.2   0.0     4e-41   7.1e-37       1     153 [.      51     224 .]      51     224 .] 0.90

  Alignments for each domain:
  == domain 1  score: 127.2 bits;  conditional E-value: 4e-41
     DUF3455   1 pagn.klalvalgrGtqnYtCaasaagaaeptavgavAtLfdatclaaklpdlleslpslv...............aelklvgkhfftdgtgPtfdldl 83 
                 p+++ k+++va+grG+qnYtC +++++aa p+ vga AtLfda+c+a k p+ l+ lp+ +               ++ ++ g+h+f d ++P+f+l++
  KHJ35126.1  51 PSNDvKVKHVAIGRGSQNYTCLTNDPSAA-PSSVGALATLFDASCIAIKDPAKLARLPKDAlqsklpaddsktltsSKIEVSGHHYFPDPQTPVFELST 148
                 778889***********************.********************9999999987778************999**********9999******8 PP

     DUF3455  84 dgskvtgkkva...svaApkdaa........gavawllltakesgtlsgvtevyRveTaGGsapatCekagekfeveYaAe 153
                 + s++ ++  +   s +Ap +a         gav+wl+l a+      +++evyRv+TaGG++p+tC++++e+f v+YaAe
  KHJ35126.1 149 AASNLGSVSPKkadSKPAPPNAIagknnkgfGAVPWLKLIANG-----DIKEVYRVNTAGGNPPKTCKDMPETFVVQYAAE 224
                 88776655555344666766666889999***********965.....9******************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       215  (0.0119917); expected 358.6 (0.02)
Passed bias filter:                      183  (0.0102069); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1679.21
//
Query:       KHJ35127.1  [L=104]
Description: hypothetical protein EV44_g2970 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (104 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       404  (0.0225333); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.23s 00:00:00.59 Elapsed: 00:00:00.37
# Mc/sec: 847.71
//
Query:       KHJ35128.1  [L=616]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.083   13.0   8.1       0.22   11.7   0.6    2.7  2  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.6   1.2e-05      0.22       2      17 ..     499     514 ..     498     515 .. 0.93
   2 ?    4.4   1.6    0.0025        44       2       9 ..     518     525 ..     518     525 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.2e-05
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +C nC +++H  ++C+
  KHJ35128.1 499 ACENCSSTMHSINECK 514
                 7**************7 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.0025
                 CTSSSSSS CS
     zf-CCHC   2 kCynCGep 9  
                 kC+nCG+p
  KHJ35128.1 518 KCRNCGGP 525
                 7*****86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (616 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       832  (0.0464053); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.38
# Mc/sec: 4885.69
//
Query:       KHJ35129.1  [L=777]
Description: putative sphingolipid c9-methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-12   47.5   0.3      1e-11   44.7   0.3    2.6  1  Vps51     Vps51/Vps67


Domain annotation for each model (and alignments):
>> Vps51  Vps51/Vps67
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   0.3   5.8e-16     1e-11      19      83 ..      21      85 ..       8      88 .. 0.91

  Alignments for each domain:
  == domain 1  score: 44.7 bits;  conditional E-value: 5.8e-16
       Vps51 19 stlkellkveasllseiraldselkalVydnYskLisasdtIrkmksemdkldqklselkqaisk 83
                 +  ++++++++l+ e  +++++l+++V++nY++L+ ++dtI++m++ ++  +++l   ++a++k
  KHJ35129.1 21 LPFPQVRQTHRNLTIELNEKQTQLRTIVGENYRQLLGTADTISHMNEMIRVAEDNLIRVSHACRK 85
                5679****************************************************999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (777 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1020  (0.0568911); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.25s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 5525.42
//
Query:       KHJ35130.1  [L=615]
Description: putative trna methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.3e-13   48.2   1.0    3.7e-12   45.9   0.1    2.5  2  tRNA_U5-meth_tr  tRNA (Uracil-5-)-methyltransferase
    0.00011   22.8   0.0    0.00029   21.5   0.0    1.7  1  Methyltransf_25  Methyltransferase domain
    0.00016   21.3   0.0    0.00047   19.8   0.0    1.8  2  Methyltransf_15  RNA cap guanine-N2 methyltransferase
    0.00032   20.2   0.0    0.00057   19.4   0.0    1.3  1  PrmA             Ribosomal protein L11 methyltransferase (Prm
     0.0016   18.3   0.0     0.0046   16.8   0.0    1.7  1  Methyltransf_31  Methyltransferase domain
     0.0049   17.3   4.3      0.048   14.1   0.1    3.8  3  Sir1             Regulatory protein Sir1
  ------ inclusion threshold ------
      0.013   16.1   0.0      0.034   14.8   0.0    1.7  1  Methyltransf_11  Methyltransferase domain
      0.016   15.1   0.2      0.035   14.1   0.2    1.5  1  TRAM             TRAM domain
      0.029   13.9   0.0      0.064   12.8   0.0    1.5  1  MTS              Methyltransferase small domain
      0.032   15.0   0.9       0.46   11.2   0.0    2.9  3  Methyltransf_12  Methyltransferase domain


Domain annotation for each model (and alignments):
>> tRNA_U5-meth_tr  tRNA (Uracil-5-)-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1       2.1   3.8e+03       1      22 [.     228     249 ..     228     254 .. 0.85
   2 !   45.9   0.1   2.1e-15   3.7e-12     194     355 ..     438     606 ..     394     608 .. 0.66

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.1
  tRNA_U5-meth_tr   1 eyeaqleekksrlkkllaefea 22 
                      +y+ ql++kk+ +++++++f+ 
       KHJ35130.1 228 DYQLQLNHKKKVIESAYRNFSH 249
                      5999**********99999975 PP

  == domain 2  score: 45.9 bits;  conditional E-value: 2.1e-15
  tRNA_U5-meth_tr 194 alevtqeskgdllelycGnGnfslalarnfekvlateiakssveaaqyniaankidnvqiirlsaeeltealkkkrefrrlkgidlksyafeti 287
                      +++   ++ + l++ y G G f+++l+  fe  l  +i+ +s+++aq n   n++   q   ++a       +  r f   k+i+++     ++
       KHJ35130.1 438 STRPRTNQIRHLVDAYSGSGLFTITLSSLFESSLGIDISTASINSAQENARLNNLSSSQAKFMAA-------DASRLF---KEITFDPD-ETAV 520
                      33334566779*****************************************9998777666655.......445666...57777664.5689 PP

  tRNA_U5-meth_tr 288 fvdPPraGldketvklvkky..erilyiscnPetlkenleel....se............thrverlalfdqfpythhlesGvlle 355
                      ++dP r G d+  +  + ++  +ri+y+scn +t + ++ ++    s+            ++ +e +  fd fp t h+es  +l+
       KHJ35130.1 521 LIDPSRKGCDDTFISQLLRFgpQRIVYVSCNVHTQARDVGKIinglSTnsdpknkesegsSYILESIIGFDFFPQTSHVESVAILD 606
                      ************99988888556***********8876654311112111111111111133456667788888888888877776 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.0   1.6e-07   0.00029       3      66 ..     451     514 ..     449     522 .. 0.88

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 1.6e-07
                      EET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT...TEEEEESBCCGBSSSTTTEE CS
  Methyltransf_25   3 dlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl...nvefvqgdaedlpfedgsfD 66 
                      d+  G+G +t+ l+  +  ++ +g+Dis + ++ a+e+a+ ++l   +++f+ +da++l f++ +fD
       KHJ35130.1 451 DAYSGSGLFTITLSSLF--ESSLGIDISTASINSAQENARLNNLsssQAKFMAADASRL-FKEITFD 514
                      6678************9..9*******************99999999*********987.4444454 PP

>> Methyltransf_15  RNA cap guanine-N2 methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       4.6   8.2e+03      48      68 ..     117     137 ..     108     142 .. 0.74
   2 !   19.8   0.0   2.6e-07   0.00047       2      70 ..     447     516 ..     446     530 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 4.6
  Methyltransf_15  48 sdkitlvlgdvfellaklkle 68 
                      +d+i+l+ +++ +++ +++le
       KHJ35130.1 117 KDNIDLIDCSLPKIFTEIQLE 137
                      678888888888887777766 PP

  == domain 2  score: 19.8 bits;  conditional E-value: 2.6e-07
  Methyltransf_15   2 rvilDlfsGaGGnviqfalvfekviaieinleklacaqhNaevYgv.sdkitlvlgdvfellaklkleki 70 
                      r ++D++sG+G  +i++   fe+  +i+i++  ++ aq+Na++ +  s++ +++ +d   l+++++++  
       KHJ35130.1 447 RHLVDAYSGSGLFTITLSSLFESSLGIDISTASINSAQENARLNNLsSSQAKFMAADASRLFKEITFDPD 516
                      6789****************************************98678899999999999998887655 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   3.2e-07   0.00057     163     214 ..     447     498 ..     434     515 .. 0.80

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 3.2e-07
        PrmA 163 eevlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNaelNkvea.kle 214
                 ++++D   GSG+ +i  + L  ++ +++Di   ++++a+eNa+lN++++ + +
  KHJ35130.1 447 RHLVDAYSGSGLFTITLSSLF-ESSLGIDISTASINSAQENARLNNLSSsQAK 498
                 57789999**********996.6779********************9984443 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   2.6e-06    0.0046       8      67 ..     450     509 ..     446     525 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 2.6e-06
  Methyltransf_31   8 lDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgld..nveFeqgdiee.le 67 
                      +D+ +G+G +t+ l ++  +     GiDis  +i++A+ena+ ++l+   ++F ++d+   ++
       KHJ35130.1 450 VDAYSGSGLFTITLSSLFES---SLGIDISTASINSAQENARLNNLSssQAKFMAADASRlFK 509
                      67778999999999964433...68**************999888887799**9999998444 PP

>> Sir1  Regulatory protein Sir1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.1   0.1   2.7e-05     0.048      52     105 ..     115     163 ..      92     177 .. 0.80
   2 ?    1.4   0.2      0.24   4.3e+02      21      62 ..     376     421 ..     368     427 .. 0.67
   3 ?   -0.4   0.0      0.84   1.5e+03      49      74 ..     489     513 ..     477     518 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.7e-05
        Sir1  52 lkkysksdlipvdskeLFelveteerefyetedgliivnkrtkkkkrkesievr 105
                  +k ++ dli ++ +++F  +++e++e+  t dgl i +++++    ++ +   
  KHJ35130.1 115 VQK-DNIDLIDCSLPKIFTEIQLEVKEISSTGDGLAIDTEHKQ----QKQQRIY 163
                 444.899******************************999999....4444444 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.24
        Sir1  21 kiinpktkklkkl....tkeerekleklklvdldelkkysksdlip 62 
                 k+inp++ ++k++    ++++ e + ++ + ++ + +++++++++p
  KHJ35130.1 376 KTINPDHIDFKSCvtdnRSKTTEYVDQFVFTNIANEFFQNNNSILP 421
                 6677777777776422255566677778899987655557777766 PP

  == domain 3  score: -0.4 bits;  conditional E-value: 0.84
        Sir1  49 ldelkkysksdlipvdskeLFelvet 74 
                 l++l   s+ ++++ d + LF+ ++ 
  KHJ35130.1 489 LNNLSS-SQAKFMAADASRLFKEITF 513
                 444555.77899**********9986 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   1.9e-05     0.034       5      63 ..     454     514 ..     450     515 .. 0.92

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.9e-05
                      -TTSHHHHHHHHTTSEEEEEES-HHHHHHHHHHCCHHT-...EEEETTEECCCTSS-TT-EE CS
  Methyltransf_11   5 cGtGrlaealakrgarvvgvDlskemlklakekaseegl...kvefvvadaeklpfednsfD 63 
                      +G+G+++  l + +++ +g+D+s++ ++ a+e+a+ ++l   + +f+ ada++l f++ +fD
       KHJ35130.1 454 SGSGLFTITLSSLFESSLGIDISTASINSAQENARLNNLsssQAKFMAADASRL-FKEITFD 514
                      79*********99***********************999999999*******97.8887777 PP

>> TRAM  TRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   0.2     2e-05     0.035       6      54 ..     132     183 ..     129     187 .. 0.89

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2e-05
                 XEEEEEEEEE-.TTSEEEEEET.......TEEEEETT--T..TEEEEEEEEEE-S CS
        TRAM   6 stqeVlveglsksegegiGrtdn......gkvvfvpgdlpgIGdfVeVkItkvkr 54 
                 +++  +v++ s s g+g++   +      +++ +vp+  p  Gd+V++k+ k + 
  KHJ35130.1 132 TEIQLEVKEIS-STGDGLAIDTEhkqqkqQRIYVVPFSTP--GDIVKAKVIKHHD 183
                 67888999999.*******777789***************..********99876 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   3.6e-05     0.064      33      98 ..     447     513 ..     437     520 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 3.6e-05
                 SEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC...EEEEE-STTTTSTTS-E CS
         MTS  33 gkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle...vevvasdvleeveekkf 98 
                 ++++D  +G G+ +++l +  ++     +d+++++++sa+en++ n+l+   ++++a d+   ++e  f
  KHJ35130.1 447 RHLVDAYSGSGLFTITLSSLFES--SLGIDISTASINSAQENARLNNLSssqAKFMAADASRLFKEITF 513
                 5789999***********99998..6899*******************999999999998877776555 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1         3   5.4e+03      75      83 ..      89      97 ..      42     127 .. 0.56
   2 ?    0.4   0.0      0.64   1.1e+03       6      59 ..     145     197 ..     143     205 .. 0.79
   3 ?   11.2   0.0   0.00026      0.46       6      68 ..     455     514 ..     450     526 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 3
  Methyltransf_12 75 vlhhlkdir 83
                     v+  lk+ir
       KHJ35130.1 89 VIDLLKKIR 97
                     333333332 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.64
  Methyltransf_12   6 GtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdll 59 
                      G+G  ++   ++ ++ ++++v +s+      k+k  k+++n+++n+++++ dl+
       KHJ35130.1 145 GDGLAIDTEHKQQKQQRIYVVPFSTPGD-IVKAKVIKHHDNQVDNNNYTTADLI 197
                      6666666666666788888888888888.8899999999999999999888876 PP

  == domain 3  score: 11.2 bits;  conditional E-value: 0.00026
  Methyltransf_12   6 GtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfD 68 
                      G+G ++  l     + + +g+Dis+++i + +++ a+ +n++ ++ ++ a d++ l+++ +fD
       KHJ35130.1 455 GSGLFTITLSSL--FESSLGIDISTASI-NSAQENARLNNLSSSQAKFMAADASRLFKEITFD 514
                      778888888777..89999*********.9999999999999999999999998888775665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (615 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       726  (0.0404931); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.58u 0.27s 00:00:00.85 Elapsed: 00:00:00.40
# Mc/sec: 4619.70
//
Query:       KHJ35131.1  [L=507]
Description: putative alternative oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-20   73.6   0.0    6.3e-20   72.1   0.0    1.7  1  O-FucT    GDP-fucose protein O-fucosyltransferase


Domain annotation for each model (and alignments):
>> O-FucT  GDP-fucose protein O-fucosyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.1   0.0   3.5e-24   6.3e-20       2     334 ..     146     466 ..     143     468 .. 0.68

  Alignments for each domain:
  == domain 1  score: 72.1 bits;  conditional E-value: 3.5e-24
      O-FucT   2 llynpaeGgfNnqrdvilrmvavarllnaT.LVlPpwdqlshwrdss..kqnrlpFsdfFd....iesLkkdvrviemeeflkelppelwsaekrksvc 93 
                 l+  +++Gg++n+r+ il+++ +a + +a  LV+P+++q+s    s+  ++ + pF +fFd      +++++++ i +++ + ++p             
  KHJ35131.1 146 LCD-NNSGGIGNIRNFILTCIRYAIHAGASgLVIPKIQQRSEKDLSNifTTGFKPFYYFFDephfKYAMSSFCPQIVLYNEVTDIP-----N------- 231
                 344.78999*******************888******8777766666999************998899*****9997777777787.....2....... PP

      O-FucT  94 keakpsyylkeilpllkkkkvvqlakf.........qklrCrskqgnpfglwdnfevsfe......aelvlhdefge.eWkarv............... 161
                       ++lk+i++   k+  + + +           k+r +        + + +e +++      +   +     + +W + +               
  KHJ35131.1 232 -----AERLKTIVDFYPKSLNIDFDGCdergvnrhlDKFRLK--------FDQWLE-KKNivisldEPATV-----RlKWATFFewpiyrdgpefantf 311
                 .....2223333333333333333333111111111222222........222221.11112222222222.....13333333444444666666666 PP

      O-FucT 162 .daLrFskeieelaaklvkrll......ekrkakggpylalHLRrekDflaaCehgggeeellaspresrreegkltpeecvpsleeialqlkgllkel 253
                  d+Lr +++i++laa  +k+l       ++ +  + ++l++HLR+e+D l                         ++p+      ++  +  ++  k  
  KHJ35131.1 312 gDLLRIRSDIRQLAAATIKELSismglkPNPSVIEANFLGAHLRTESDALP------------------------FWPKF-----DQQSDGYLNEAKTR 381
                 **********************99999966778899***************........................77777.....88888888888888 PP

      O-FucT 254 kltsvfvAtdeiyggeelkelkkefpnlv.kvtkeklaskeelekfkdgsva...aiDqiicsrsdvFigtyeStfsafvkreRe 334
                 +l+ +++A++++ +++++++   e+ n+  + ++  l+ keel+ ++  s      +D++++ +s +F g+++S+f+++v  +R+
  KHJ35131.1 382 ELNYIYLASGNSTDSQRFANRALEMHNIKvYTKNDLLHGKEELAALRSLSWDqqgLVDFLVLQKSTFFTGCSFSSFAMNVAVKRH 466
                 899*******666655444444444444434444445566666666665544455*************************99997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.21s 00:00:00.72 Elapsed: 00:00:00.37
# Mc/sec: 4109.04
//
Query:       KHJ35132.1  [L=656]
Description: putative eukaryotic peptide chain release factor gtp-binding subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.9e-43  146.7   0.0    1.2e-42  145.7   0.0    1.6  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    9.1e-29  100.0   0.5    3.4e-28   98.2   0.1    2.2  2  GTP_EFTU_D3  Elongation factor Tu C-terminal domain
    6.7e-07   29.6   0.4    1.6e-06   28.4   0.4    1.7  1  GTP_EFTU_D2  Elongation factor Tu domain 2
     0.0016   18.5   0.0      0.012   15.7   0.0    2.4  1  MMR_HSR1     50S ribosome-binding GTPase
  ------ inclusion threshold ------
        1.1    7.5   4.8        1.6    7.0   4.8    1.2  1  Menin        Menin


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.7   0.0   3.3e-46   1.2e-42       1     189 [.     220     439 ..     220     554 .. 0.92

  Alignments for each domain:
  == domain 1  score: 145.7 bits;  conditional E-value: 3.3e-46
                 TCEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHHHHHST.............HCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGHHH CS
    GTP_EFTU   1 krirnigiighvDhGKtTLtdrLlyktgaiskkgekaeeerv.............lDtlkeErergiTiksaaisleketkkylinliDtPGHvdFske 86 
                 k+++ni++ighvD+GK+TL +++l ++g+i++++ ++ ++++             lD +keEr +g Ti++  + +e  t+k++++++D+PGH+ ++  
  KHJ35132.1 220 KEHVNIIFIGHVDAGKSTLGGAILIQSGMIDQRTLEKYKKEAkdmareswwiswvLDLNKEERSQGKTIEVGRAFFE--TDKRRYSILDAPGHKTYVPS 316
                 689*******************************9994433347899******************************..******************** PP

                 HHHHHHT-SEEEEEEETTTB.......STHHHHHHHHHHHHTTTE.EEEEEESCGST.....HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEE CS
    GTP_EFTU  87 virglrvlDgavlvvdaveG.......vepqteevlrlalkegvp.iivfiNKmDrl.....kaelkeiveevkqklsrkeeklekygekgekevpvvf 172
                 +i g++++D+ +lv++a++G          qt+e++ la+++gv+ ++v+iNKmD +     +++++e++ +++q l       ++ g++ ++++++++
  KHJ35132.1 317 MIGGASQADVGILVISARKGeyetgfeKGGQTREHAMLAKTQGVNkLVVAINKMDDPtvewsEKRYNECIAKLSQFL-------KSTGYNLKNDIHFLP 408
                 *************************9999****************************99999999999999999666.......6667777778***** PP

                 EBTTTTBTHH..............HHHHHHH CS
    GTP_EFTU 173 gSalkgegvk..............tllealv 189
                 ++a +  g+k              +lle+l+
  KHJ35132.1 409 IAAQQMLGLKdrvpekicpwykgpSLLEYLD 439
                 ****999998667777777776665555554 PP

>> GTP_EFTU_D3  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       1.1   3.9e+03      43      90 ..     131     179 ..     126     183 .. 0.69
   2 !   98.2   0.1   9.4e-32   3.4e-28       2     111 ..     538     648 ..     537     649 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.1
                  EEEEECCSSTTSB-BSS-SSCCS.TT-CEEEEEEECCEEEE--TTTHCC CS
  GTP_EFTU_D3  43 veLlskldkktekvsekkpefvk.pGdnvivevelikpialekgseypq 90 
                  + L s+++kk+ +v+++++++++ +G +++++  ++k +   k s  p+
   KHJ35132.1 131 IGLASSTEKKKANVNSTESSLIQeSGTKATATKAIEKSLESGKISSTPP 179
                  5677888888888888777777526888888877777766666665555 PP

  == domain 2  score: 98.2 bits;  conditional E-value: 9.4e-32
                  -EEECCEEEEEEESSS..SS-BSTT-EEEEESSS-EEEEEEEEEEECCSSTTSB-BSS-SSCCSTT-CEEEEEEEC...CEEEE--TTTHCCCCEEEE CS
  GTP_EFTU_D3   2 ikphtkfeAqvyilekerhtpitagYrpvlyirtadvtgkvveLlskldkktekvsekkpefvkpGdnviveveli...kpialekgseypqlGrFai 96 
                  ++ ++ feAq+ +l    ++++ ag+++vl++++a +++++++L+++l+k t+++s+k p  +k+Gd++i+++e+i    ++++e++++y+qlGrF++
   KHJ35132.1 538 VHCVSAFEAQIRVLDL--KNILSAGFNCVLHVHSAIEEVTFAALIHTLQKGTGRKSKKAPTHAKKGDSIIAQIEVIggaGTVCVERFEDYQQLGRFTL 633
                  667889**********..********************************************************9833358***************** PP

                  ECTTCEEEEEEEEEE CS
  GTP_EFTU_D3  97 ReggrTvaaGvvtei 111
                  R++g+T+a+G++t++
   KHJ35132.1 634 RDQGQTIAIGKITKL 648
                  *************97 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.4   4.5e-10   1.6e-06       1      74 []     464     532 ..     464     532 .. 0.89

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 4.5e-10
                  EEEEEEEEEESEEETTEEEEEECTCTTSEEEEEEEEEEEEETE.EESEEETTSEEEEEEEESSCCSGSSTTCEEE CS
  GTP_EFTU_D2   1 GtvalgrvysGtlkkGdevrilgndtskkeivtrissletfhe.dedeavaganaGvivaikgledaiivGdtlt 74 
                  Gt++ g+++ G +kkG+ + +++n+  +k   ++  +++ + e +++   +g+++ + +++++ ed i+ G +l+
   KHJ35132.1 464 GTIVEGKIEAGAIKKGMSLIMMPNR--EK---VEAAAIYGETEeEVTVGQCGDQIRLRLRGIEEED-ILPGFVLC 532
                  9********************7754..77...99999999988344555*****************.******98 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.0   3.4e-06     0.012       2      92 ..     225     340 ..     224     371 .. 0.60

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 3.4e-06
                 EEEEESTTSSHHHHHHHHH...............T................STEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinalt...............g................ekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgka 69 
                 ++++G+  +GKStL  a++               +                +  + ++ +g+T+++ ++ ++++++++ ++D pG  +    +  +   
  KHJ35132.1 225 IIFIGHVDAGKSTLGGAILiqsgmidqrtlekykKeakdmareswwiswvlDLNKEERSQGKTIEVGRAFFETDKRRYSILDAPG--H----KTYVPSM 317
                 89****************86665555544444440344444444444443345566666677777766666666788********..4....2234444 PP

                 HHHHHCTSEEEEEEETTTTCSHH CS
    MMR_HSR1  70 flaleeadlillvvdaseeklkp 92 
                 +    +ad+ +lv++a++++++ 
  KHJ35132.1 318 IGGASQADVGILVISARKGEYET 340
                 44455589999999988444433 PP

>> Menin  Menin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   4.8   0.00044       1.6     486     584 ..      86     187 ..      22     230 .. 0.63

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.00044
       Menin 486 eksksseqlPttladltaacgekilnpdfllqggdqplaeqkqkkageeserre.annnnnsksnsekeadkkasttsnggeass..tpsseseaaves 581
                   +k   + Pt+l+dl   +  k   p +l  ggd p  + k  + g  s++++ + n n+++s+  +e+ +ka++t   +++    + ss++ +  +s
  KHJ35132.1  86 VVTKRFTDSPTNLSDLNKPITTKENAPKILSIGGDSPKPKAKVLSIGLASSTEKkKANVNSTESSLIQESGTKATATKAIEKSLEsgKISSTPPSGRSS 184
                 345666789****************************99999988886665555256667777777777777766665444432212555555555555 PP

       Menin 582 pse 584
                 ps+
  KHJ35132.1 185 PSR 187
                 543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (656 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       940  (0.052429); expected 358.6 (0.02)
Passed bias filter:                      526  (0.0293379); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.39
# Mc/sec: 4987.86
//
Query:       KHJ35133.1  [L=688]
Description: putative actin cytoskeleton organization protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.8e-44  149.7   8.6    1.5e-41  141.9   2.3    4.7  5  UNC45-central  Myosin-binding striated muscle assembly centra
    2.3e-06   27.4  13.7      0.035   14.1   0.0    7.3  8  Arm            Armadillo/beta-catenin-like repeat
     0.0054   16.8   1.5       0.49   10.4   0.3    2.7  2  DUF2521        Protein of unknown function (DUF2521)
  ------ inclusion threshold ------
      0.025   15.0   9.0         19    5.7   0.0    5.8  5  HEAT_2         HEAT repeats
        1.3    8.3   6.6       0.33   10.3   1.1    2.6  3  Mo25           Mo25-like


Domain annotation for each model (and alignments):
>> UNC45-central  Myosin-binding striated muscle assembly central
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.9   2.3   4.1e-45   1.5e-41       1     153 []      72     232 ..      72     232 .. 0.99
   2 ?   -0.8   0.0      0.37   1.3e+03      50      67 ..     388     405 ..     332     450 .. 0.65
   3 ?    4.0   0.0     0.012        43     100     150 ..     492     539 ..     481     543 .. 0.85
   4 ?   -0.3   0.0      0.26   9.2e+02       7      33 ..     551     577 ..     545     591 .. 0.84
   5 ?    2.6   0.0     0.033   1.2e+02       6      60 ..     609     674 ..     603     680 .. 0.69

  Alignments for each domain:
  == domain 1  score: 141.9 bits;  conditional E-value: 4.1e-45
                    .HHHHHHHHC-T---TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCTHHHHHHHHHHHHHHHHSSHHHHHHHHTSTTHHHHHHHHHHS.. CS
  UNC45-central   1 ehldlllkfldmrqpesvrslallilsklldaakeefeeaiseflesllekgdeddllnalsvltalFpvvpdvasalflsegflesllelves.k 95 
                    ++l++++++ld rq++ +rs++ l++s++l+aa  +++e+is  l s+++kg+++d+++a+s++++lFpv+pd  s+++l+egfl+sl  l+++ +
     KHJ35133.1  72 QCLETIIENLDLRQSQLTRSHVILAISAYLNAADNSGSEKISRLLLSKIKKGTSEDFKVAFSAVASLFPVIPDHVSTIVLNEGFLSSLELLIKRkE 167
                    79********************************************************************************************99 PP

                    S-HHHHHHHHHHHHTT--SSSSSHHHHHHHHHHHHHHHH-SSHH.........HHHHHHTTSST- CS
  UNC45-central  96 kskkvqlaalellsaAcidkkcrkaiaknyvewLeelvkssddekl.......vkalAavvLaKL 153
                    k+  +++a+le+l++Ac++++cr+ai+k ++ewL e v+s++ +++       +k lAa++LaKL
     KHJ35133.1 168 KDGAIEQAVLEMLNVACMNTNCRDAIRKICIEWLTEKVQSNSGPSSinkysesIKDLAAIILAKL 232
                    ********************************************99******************8 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.37
                    SCCTHHHHHHHHHHHHHH CS
  UNC45-central  50 ekgdeddllnalsvltal 67 
                    + ++ ++l  a+sv ++l
     KHJ35133.1 388 QNSSTSSLTLAVSVTSSL 405
                    444444444444444433 PP

  == domain 3  score: 4.0 bits;  conditional E-value: 0.012
                    HHHHHHHHHHTT--SSSSSHHHHHHHHHHHHHHHH-SSHH..HHHHHHTTS CS
  UNC45-central 100 vqlaalellsaAcidkkcrkaiaknyvewLeelvkssddeklvkalAavvL 150
                    v +++l l ++A++d + r+ i     + Leel+ s++       +Aav L
     KHJ35133.1 492 VFESLLALTNIASTDDTARNSIIRLTFSQLEELLLSNNVMV---TRAAVEL 539
                    6778999**************************99999664...4777766 PP

  == domain 4  score: -0.3 bits;  conditional E-value: 0.26
                    HHHC-T---TTHHHHHHHHHHHHHHHH CS
  UNC45-central   7 lkfldmrqpesvrslallilsklldaa 33 
                     kf d ++++s r+++ll+ls + d+a
     KHJ35133.1 551 AKFADGSKQASNRMHILLALSDAEDSA 577
                    678888999***********9988665 PP

  == domain 5  score: 2.6 bits;  conditional E-value: 0.033
                    HHHHC-T---TTHHHHHHHHHHHHH............HHHHHHHHHHHHHHHHHHHSCCTHHHHHHH CS
  UNC45-central   6 llkfldmrqpesvrslallilskll............daakeefeeaiseflesllekgdeddllna 60 
                    ll+ l+ + +e++r+  ++++  +l            + ++e++ e+++e+l++  +++  d  ++a
     KHJ35133.1 609 LLR-LCKEDEEDLRHRGVVCILNVLsipneigkwgyeKIKNEKGFEILKECLKKSKNQEVLDIAVEA 674
                    444.555799999999999999999888888877776667777777777766665555555555554 PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.83     3e+03       8      20 ..     229     241 ..     226     241 .. 0.80
   2 ?   -2.2   0.0       1.4   4.9e+03      26      41 .]     312     327 ..     305     327 .. 0.84
   3 !   14.1   0.0   9.8e-06     0.035       5      40 ..     371     406 ..     368     407 .. 0.87
   4 !    7.3   0.0    0.0014         5       7      39 ..     414     449 ..     408     451 .. 0.89
   5 ?   -1.0   0.1       0.6   2.1e+03      30      41 .]     493     504 ..     492     504 .. 0.83
   6 ?    4.3   0.3     0.012        44      17      39 ..     521     543 ..     517     545 .. 0.90
   7 ?    1.8   0.1     0.078   2.8e+02      17      40 ..     567     590 ..     564     591 .. 0.87
   8 ?    1.7   0.0     0.079   2.8e+02      10      36 ..     648     675 ..     644     676 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.83
                 HHHTTHHHHHHHH CS
         Arm   8 vieaGavppLvrL 20 
                 + ++ avppL +L
  KHJ35133.1 229 LAKLQAVPPLPTL 241
                 568899****876 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 1.4
                 HHHHHHHHHHHHHHTT CS
         Arm  26 eevqeeAawALsNLaa 41 
                  ++ + A++ L N++a
  KHJ35133.1 312 SSTIFGALTILVNITA 327
                 6788899999999985 PP

  == domain 3  score: 14.1 bits;  conditional E-value: 9.8e-06
                 HHHHHHTTHHHHHHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm   5 kdavieaGavppLvrLLssedeevqeeAawALsNLa 40 
                 ++av eaG++p+Lv+ +++ +++ ++ A++  s La
  KHJ35133.1 371 CQAVFEAGIIPILVTHIQNSSTSSLTLAVSVTSSLA 406
                 79****************999999988888877776 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.0014
                 HHHHTTHHHHHHHHTT...TSSHHHHHHHHHHHHHH CS
         Arm   7 avieaGavppLvrLLs...sedeevqeeAawALsNL 39 
                  + ++Gav+ L++  s   +e+++ ++ Aa AL+ +
  KHJ35133.1 414 KMAQQGAVKMLIHAFSkfpTENQSGRRTAALALARI 449
                 5789****************************9866 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 0.6
                 HHHHHHHHHHTT CS
         Arm  30 eeAawALsNLaa 41 
                 +e++ AL+N+a+
  KHJ35133.1 493 FESLLALTNIAS 504
                 57888*****96 PP

  == domain 6  score: 4.3 bits;  conditional E-value: 0.012
                 HHHHTTTSSHHHHHHHHHHHHHH CS
         Arm  17 LvrLLssedeevqeeAawALsNL 39 
                 L +LL s +++v+++A+  ++NL
  KHJ35133.1 521 LEELLLSNNVMVTRAAVELVCNL 543
                 6689***************9999 PP

  == domain 7  score: 1.8 bits;  conditional E-value: 0.078
                 HHHHTTTSSHHHHHHHHHHHHHHT CS
         Arm  17 LvrLLssedeevqeeAawALsNLa 40 
                 L++L + ed  ++++A +AL+ L+
  KHJ35133.1 567 LLALSDAEDSATCKAAGGALASLT 590
                 7778889*************9886 PP

  == domain 8  score: 1.7 bits;  conditional E-value: 0.079
                 HTTHHHHHHHHTT.TSSHHHHHHHHHHH CS
         Arm  10 eaGavppLvrLLs.sedeevqeeAawAL 36 
                 +  + ++L ++L+ s+++ev+  A+ AL
  KHJ35133.1 648 NEKGFEILKECLKkSKNQEVLDIAVEAL 675
                 5667789999***********9999887 PP

>> DUF2521  Protein of unknown function (DUF2521)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.3   0.00014      0.49       5      64 ..      21      80 ..      18     106 .. 0.94
   2 !    4.7   0.1    0.0078        28       9      43 ..     163     197 ..     157     209 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00014
     DUF2521  5 tslkekkrekqlklErklLrelslkklkksvkehfksllpfaslaksiledgCidlaiea 64
                 sl+++ +ek lk E k    +sl k+ ++ + ++++  +  +l ++++ d+C++  ie 
  KHJ35133.1 21 ASLNDQLQEKGLKDEEKCQLMISLTKILNDDNRQVNKPQSNSKLYHQLIDDQCLETIIEN 80
                68999******************************999999**************99986 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0078
     DUF2521   9 ekkrekqlklErklLrelslkklkksvkehfksll 43 
                  k++ek+  +E+ +L  l +  +++++++++ ++ 
  KHJ35133.1 163 IKRKEKDGAIEQAVLEMLNVACMNTNCRDAIRKIC 197
                 69**************************9998874 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.0      0.06   2.1e+02       4      61 ..      44     110 ..      43     138 .. 0.68
   2 ?   -4.3   0.0         5   1.8e+04      50      58 ..     300     308 ..     299     315 .. 0.64
   3 ?    2.8   0.0     0.042   1.5e+02      25      58 ..     413     449 ..     354     487 .. 0.80
   4 ?    3.1   1.7     0.034   1.2e+02      32      79 ..     560     621 ..     518     627 .. 0.60
   5 ?    5.7   0.0    0.0054        19      26      59 ..     645     679 ..     633     686 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.06
      HEAT_2   4 Llqalendpdpevrr.aairaLg.rignpealpaLvell.ededpavRraaaeaLgai.......gdp 61 
                 L ++l nd + +v + +    L  ++ ++++l++++e l   ++  +R +++ a++a+       g++
  KHJ35133.1  44 LTKIL-NDDNRQVNKpQSNSKLYhQLIDDQCLETIIENLdLRQSQLTRSHVILAISAYlnaadnsGSE 110
                 56666.66666666556666666567788899999999944588999999999998764443333344 PP

  == domain 2  score: -4.3 bits;  conditional E-value: 5
      HEAT_2  50 aaaeaLgai 58 
                 a+++aLg+ 
  KHJ35133.1 300 AIIKALGEA 308
                 667777765 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.042
      HEAT_2  25 grignpealpaLvelled...edpavRraaaeaLgai 58 
                 g+++ + a+++L+ + +    e+   Rr+aa aL++i
  KHJ35133.1 413 GKMAQQGAVKMLIHAFSKfptENQSGRRTAALALARI 449
                 4677788888888887433338888899999999876 PP

  == domain 4  score: 3.1 bits;  conditional E-value: 0.034
      HEAT_2  32 a...lpaLvellededpavRraaaeaLgai...........gdpealpaLkellddddddvv 79 
                 a   + +L+ l + ed+a+ +aa  aL+ +            +++ +++L++l+++d++d++
  KHJ35133.1 560 AsnrMHILLALSDAEDSATCKAAGGALASLtqwdtavnsilERDRGARLLLRLCKEDEEDLR 621
                 24445566667777999999999999985533332222222467788999999998888775 PP

  == domain 5  score: 5.7 bits;  conditional E-value: 0.0054
      HEAT_2  26 rignpealpaLvell.ededpavRraaaeaLgaig 59 
                 +i+n++ +++L e+l ++++ +v   a+eaL  ++
  KHJ35133.1 645 KIKNEKGFEILKECLkKSKNQEVLDIAVEALKLMR 679
                 68889999999999977889999999999997665 PP

>> Mo25  Mo25-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   1.1   9.1e-05      0.33      14     100 ..      14     102 ..       8     169 .. 0.78
   2 ?   -0.3   0.1      0.15   5.4e+02      38     102 ..     337     409 ..     318     453 .. 0.71
   3 ?   -2.6   0.0      0.78   2.8e+03     204     231 ..     518     545 ..     509     575 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 9.1e-05
        Mo25  14 kslkellskldnskkkkka.eeelskqLkslkeillgdpdtepskeqvaqLlqeilkedllyklvknlkklefe.arkdvaqifsnllr 100
                 ks+++ l++l+++ ++k +  ee  + + sl +il +d+ +  +++  ++L+++++++++l+++++nl+  + + +r +v   +s  l+
  KHJ35133.1  14 KSIEDWLASLNDQLQEKGLkDEEKCQLMISLTKILNDDNRQVNKPQSNSKLYHQLIDDQCLETIIENLDLRQSQlTRSHVILAISAYLN 102
                 67888888888655555553455556678999****9877777788789******************9976655234455555555555 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.15
        Mo25  38 kqLkslkeillgdp........dtepskeqvaqLlqeilkedllyklvknlkklefearkdvaqifsnllrrk 102
                 k +++lk+  + ++        d+    e+v++  q++++  ++  lv+++++ +  +   ++++ s+l r  
  KHJ35133.1 337 KRINQLKAYATATNlsktpdnlDQLDDDEHVSKRCQAVFEAGIIPILVTHIQNSSTSSLTLAVSVTSSLARTP 409
                 5555555555444444444333333445677888899999999999999999999999999999999888873 PP

  == domain 3  score: -2.6 bits;  conditional E-value: 0.78
        Mo25 204 fkyinkllqsenYVtkrqslkLLgelLl 231
                 f+++++ll s+n    r +++L+ +l+ 
  KHJ35133.1 518 FSQLEELLLSNNVMVTRAAVELVCNLVQ 545
                 6788888999999888999888877765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (688 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       660  (0.0368119); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.62u 0.24s 00:00:00.86 Elapsed: 00:00:00.40
# Mc/sec: 5196.29
//
Query:       KHJ35134.1  [L=356]
Description: putative transcription factor tfiih subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.9e-105  351.3   0.0   4.6e-105  351.0   0.0    1.1  1  Tfb4      Transcription factor Tfb4


Domain annotation for each model (and alignments):
>> Tfb4  Transcription factor Tfb4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  351.0   0.0  2.6e-109  4.6e-105       1     275 [.      19     311 ..      19     312 .. 0.94

  Alignments for each domain:
  == domain 1  score: 351.0 bits;  conditional E-value: 2.6e-109
        Tfb4   1 pslltvvldtnpkawaeleekltlsevlasllvflNahLalnaaNkvaviashsqkakflYpseekekeaskkkdvels.kssknkyrefrlvdelvve 98 
                 psll +vldtnp+awa l+ +l+ls ++a+l+vf+NahLa+n+aN+vav+ash+++  +lYp++  +++ s+ +d++++   ++nkyr+f lv+ ++++
  KHJ35134.1  19 PSLLFIVLDTNPHAWALLAPELPLSGAVANLIVFINAHLAINNANQVAVVASHCHRPVWLYPQPPLNSDDSEMSDATSKpLDNTNKYRPFALVESSILA 117
                 79*************************************************************997665555555544415667*************** PP

        Tfb4  99 elkellsetskaeekaek.sllagalslaLcyinrvsklaeaea.................eklksRilvvsaskdsalqyipimNviFaaqklkipid 179
                 +l+el+ +t++++ ++++ + +a+al+laL+yin++s +   ++                   l+sRilv+s s d a+qyipimNv Faaq+l +pid
  KHJ35134.1 118 SLRELIITTTEDDVSSTTsTQMASALTLALSYINKASVKLFGSSsggaetslisvdsneklLGLQSRILVISVSGDLAQQYIPIMNVTFAAQRLGVPID 216
                 *******9999999998889***************976665555799************9999************************************ PP

        Tfb4 180 vvklggkdsafLqQasdaTkGvylkvkepkgllqyLltaflidqssRsllvlptrvsVdfRasCfchrkvvdiGfvCSvCLsilceispen.kCktC 275
                 ++kl+g d++fLqQasda kGvy+ +k+pkg+lqyL++afl+d +sR++lv+pt+  +dfRa+CfchrkvvdiGfvCSvCLsi+c + pe+  C tC
  KHJ35134.1 217 ICKLAG-DTVFLQQASDASKGVYMYIKNPKGFLQYLMMAFLPDLESRKHLVVPTQGTIDFRAACFCHRKVVDIGFVCSVCLSIFCSP-PEGtICRTC 311
                 ******.********************************************************************************.66669**** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (356 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2628.75
//
Query:       KHJ35135.1  [L=564]
Description: putative threonine aspartase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.8e-43  148.1   1.7    4.4e-26   91.6   0.0    2.2  2  Asparaginase_2  Asparaginase


Domain annotation for each model (and alignments):
>> Asparaginase_2  Asparaginase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.6   0.0   2.4e-30   4.4e-26       3     155 ..      25     183 ..      23     203 .. 0.88
   2 !   55.2   0.8   2.9e-19   5.3e-15     131     288 ..     338     502 ..     312     520 .. 0.69

  Alignments for each domain:
  == domain 1  score: 91.6 bits;  conditional E-value: 2.4e-30
                     EEEEEEEESE-G-HHHHHHHHHCHHHHHHHHHHHHHTT--HHHHHHHHHHHHHCTCCCSSSTTSS-BTTS---EEEEEEETTTTEEEEEEEESSB CS
  Asparaginase_2   3 lvihGGAgsilktkereeavrkalkealeagykvLkeggsaldaVeaavrllEddplfnaGkGsvltedgeveldAsimdgktlraGaVagvkrv 97 
                     + +h GAg  ++   +e +  +a ++ +++++ +Lk+gg+a+daVeaa+++lEd+  +naG+Gs++  dg ve dA+i+d   + +Ga+ +  ++
      KHJ35135.1  25 IFVHAGAGFHST--LNEYTHLEACDSSARMAMGILKAGGTAVDAVEAAIKVLEDKEITNAGYGSNMAIDGVVECDATIVDHLGR-SGACGATAQI 116
                     789999997777..677778899999******************************************************7765.99999999** PP

                     S-HHHHHHHHHHHCS-S.........EEEHHHHHHHHHHTT-----CGGG--HHHHHHHHHHHHCCC CS
  Asparaginase_2  98 knpislArlvmeksehv.........lLvgegAeefareqglelvdeesllteerlkelekakkeka 155
                     knpi+lAr+++++s+ +         lLvg+gA +fa e+g+ +v+ e l+ + +++++++++++ +
      KHJ35135.1 117 KNPINLARKILNESSKTlslrrvppnLLVGQGAVDFAWEHGIPVVPYEMLVSKGARDRYMRWREDLN 183
                     ***********9998753333333337**************************99999999988755 PP

  == domain 2  score: 55.2 bits;  conditional E-value: 2.9e-19
                     ----CGGG--HHHHHHHHHHHHCCCHS..B-S-BS-TTT...TT---EEEEEE-TTS-EEEEEEE--STTB-TTEE-STTSTTTSEEE....... CS
  Asparaginase_2 131 elvdeesllteerlkelekakkekaekkeaknvsekelk...aklgTvGaValDsegnlAaaTSTgGltnklvGRvGDspiiGaGtYA....... 215
                     ++ d++sll +++++ ++ + +++++ + +++ +e + +   + + TvGa+a+D  g++Aa+ S+gG+++k  GRvG ++++G G  +       
      KHJ35135.1 338 KIYDNTSLLIDRKYRLHSPFDATNSSLQRTNDNREFTERnedSITDTVGAIAIDLYGHIAAGSSSGGIGMKHRGRVGPAALVGIGSAVvpvdddd 432
                     5567777777877777777777777654444433332223435556***************************************9766666554 PP

                     ETTTE.EEEEEE-HHHHCCTTHHHHHHHHHHTTT--HHHHHHHHHHCHHHHTTT-EEEEEEETTS-EEEEECSC CS
  Asparaginase_2 216 dnkvg.AvsaTGkGeeiirellaadivalmeykglsleeAaekvieeklkrvkgsgGviavdkkGevaaefnse 288
                     d++++ A+ ++G+Ge++  ++++++ + ++ ++ ++ +  ++   +e+         ++ vd  G+ +++ +++
      KHJ35135.1 433 DEQICvAAVTSGTGEHMATTMASQKCADRLYHNTRKTKGGVDIEATEEEA----IQSFVLVDFMGHPGVRGSNS 502
                     44554388999***********9999999887555544444433332222....23455555555555444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (564 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       427  (0.0238162); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 4144.95
//
Query:       KHJ35136.1  [L=967]
Description: putative vacuolar membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.2e-25   88.7   7.2    3.3e-21   75.6   7.0    2.6  2  Clathrin      Region in Clathrin and VPS
    6.1e-20   71.2   0.4    1.8e-19   69.7   0.4    1.9  1  VPS11_C       Vacuolar protein sorting protein 11 C terminal
    1.8e-06   27.9   5.7    6.8e-06   26.0   5.7    2.1  1  zf-C3H2C3     Zinc-finger
     0.0023   17.7   6.9     0.0064   16.3   6.9    1.8  1  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
     0.0037   17.3   2.4     0.0089   16.1   2.4    1.6  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
     0.0042   17.4   6.5      0.011   16.1   6.5    1.7  1  zf-RING_2     Ring finger domain
     0.0084   16.0   5.8      0.018   15.0   5.8    1.6  1  zf-RING_5     zinc-RING finger domain
  ------ inclusion threshold ------
      0.015   14.8   0.1      0.037   13.5   0.1    1.6  1  Vps8          Golgi CORVET complex core vacuolar protein 8
      0.024   14.3   0.6       0.11   12.2   0.1    2.2  2  TPR_11        TPR repeat
        0.1   12.8   3.8       0.73   10.1   0.9    3.2  2  ANAPC3        Anaphase-promoting complex, cyclosome, subunit 
       0.12   12.7   0.0       0.27   11.5   0.0    1.5  1  DUF2316       Uncharacterized protein conserved in bacteria (
       0.12   12.7   5.0       0.29   11.4   5.0    1.6  1  zf-rbx1       RING-H2 zinc finger domain
       0.13   13.2   0.1         13    6.9   0.0    3.6  2  TPR_14        Tetratricopeptide repeat
       0.31   11.0   4.6       0.67    9.9   4.6    1.6  1  PHD           PHD-finger
       0.36   10.9   5.1          1    9.4   5.1    1.8  1  zf-RING_UBOX  RING-type zinc-finger
       0.55   10.2   5.0        1.5    8.8   5.0    1.8  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
       0.92    9.8   2.7        4.7    7.6   0.3    3.1  2  TPR_2         Tetratricopeptide repeat
        4.1    7.1   8.7       0.37   10.5   3.1    2.0  2  Zn_ribbon_17  Zinc-ribbon, C4HC2 type


Domain annotation for each model (and alignments):
>> Clathrin  Region in Clathrin and VPS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.6   7.0   3.3e-24   3.3e-21       7     134 ..     413     542 ..     407     546 .. 0.94
   2 !   10.2   0.0    0.0005       0.5      21      54 ..     645     681 ..     629     695 .. 0.82

  Alignments for each domain:
  == domain 1  score: 75.6 bits;  conditional E-value: 3.3e-24
                 TS-CCCCHHHHHCTT-HHHHCHHHCCHHHCHTS--HHHHHHHHHHHHHTT-HHHHHHTTSS---..S-TTHHHHHHHT-SSHHHHHHHHHTTXTHSSHS CS
    Clathrin   7 pidlsrvvklfeeaglleelleyLekvlkedskenpalqtallelyakyddpqeleeflkknnn..ydlekvaklcekadlyeeavilykkinefkkai 103
                  i+ s++++ f ++++++ l+e+Le++  e +k+n++  t+ll +yak +d+++le+f+k+     +dl++++++c++ ++y++a++l  k++e++ +i
  KHJ35136.1 413 NIEPSQIIRKFLDTQRIHNLIEFLEELH-EHHKANSDHTTLLLNCYAKLKDIKKLEKFIKSPGDlkFDLDTAISMCRQSGYYDQAIYLAEKNEEHELVI 510
                 6899************************.566788***************************9999********************************* PP

                 SX.SSSSHCSCHHHHTTTTTXXSHHHHHHHHH CS
    Clathrin 104 sl.lkklkdfddaieyaakvsnpelwekllea 134
                 ++ +++ k fd+a++y+ +++   ++ +l+++
  KHJ35136.1 511 DIlIEDSKIFDQALQYIYQLDPYIAYTCLMKY 542
                 *88**************999988888888776 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.0005
                 T-HHHHCHHHCCHHHCHTS...--HHHHHHHHHHHHH CS
    Clathrin  21 glleelleyLekvlkedsk...enpalqtallelyak 54 
                 ++++el+e+Le++l++ s    +  +l+t l e+y+ 
  KHJ35136.1 645 DNPNELIEFLEACLEQRSLkesDKADLYTTLFEMYLH 681
                 689***********5443367799***********85 PP

>> VPS11_C  Vacuolar protein sorting protein 11 C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.7   0.4   1.8e-22   1.8e-19       1      45 []     918     962 ..     918     962 .. 0.98

  Alignments for each domain:
  == domain 1  score: 69.7 bits;  conditional E-value: 1.8e-22
     VPS11_C   1 netirelrraQeesadrhdlFkaaLeeseDrFkvvadyFGRGvme 45 
                 n+tir++r+aQ es+drhdlF +aL+ seDrF++++++FGRGvm+
  KHJ35136.1 918 NDTIRAIRKAQVESSDRHDLFLDALRHSEDRFGTITEFFGRGVMD 962
                 89******************************************6 PP

>> zf-C3H2C3  Zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   5.7   6.8e-09   6.8e-06       1      30 [.     872     901 ..     872     915 .. 0.80

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 6.8e-09
   zf-C3H2C3   1 CdnCglkLdypfvaysCkHlvHakCadeev 30 
                 C  Cgl+L  p+v++ CkH++H+ C + ++
  KHJ35136.1 872 CQFCGLQLSLPIVHFLCKHSFHQTCLNLDI 901
                 99***********************65444 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   6.9   6.4e-06    0.0064       2      40 .]     872     914 ..     871     914 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 6.4e-06
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLee....kneCPlC 40 
                 C+ C   l+ p+v + C+H+f+q C+   +e     + +CP C
  KHJ35136.1 872 CQFCGLQLSLPIVHFLCKHSFHQTCLNLDIEPdgsiEGSCPSC 914
                 *************************987666411114489988 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   2.4   8.9e-06    0.0089      37      80 ..     871     917 ..     865     922 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 8.9e-06
                 TCSTTTTTS..-EEEBTTS-EEEHHHHHHHHHHHST.SSB-TTTSSB CS
  zf-ANAPC11  37 sckfpGddc..plvlGkckhnfhlhcilkwletets.kglcpmcrqt 80 
                 +c+f G +   p+v   ckh+fh+ c+   +e + s +g cp c++ 
  KHJ35136.1 871 HCQFCGLQLslPIVHFLCKHSFHQTCLNLDIEPDGSiEGSCPSCKKD 917
                 68888887522778889************9998876489*****975 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   6.5   1.1e-05     0.011       2      44 .]     871     915 ..     870     915 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.1e-05
   zf-RING_2   2 eCpICleelssadsvlllpCgHvfhreClerwlrssst....CPlCr 44 
                  C  C  +ls    v+ l C+H+fh++Cl+  +++  +    CP C+
  KHJ35136.1 871 HCQFCGLQLS-LPIVHFL-CKHSFHQTCLNLDIEPDGSiegsCPSCK 915
                 6999976775.4778888.**********7779999999999****7 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   5.8   1.8e-05     0.018       1      44 []     871     916 ..     871     916 .. 0.97

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 1.8e-05
   zf-RING_5   1 hCnkCfeklskeekfyltsCgHifCekClkkll....ekeavCpiCrk 44 
                 hC+ C  +l  + +++   C+H+f+++Cl+         e  Cp C+k
  KHJ35136.1 871 HCQFCGLQL--SLPIVHFLCKHSFHQTCLNLDIepdgSIEGSCPSCKK 916
                 9********..***********************************97 PP

>> Vps8  Golgi CORVET complex core vacuolar protein 8
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.1   3.7e-05     0.037      25      74 ..     452     501 ..     440     506 .. 0.92

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.7e-05
        Vps8  25 alvehysskgelerleelilhldpksLDldqvlklckehrLydaliYvwn 74 
                  l++ y++ ++ ++le+ i +    ++Dld+++++c++ + yd  iY+ +
  KHJ35136.1 452 LLLNCYAKLKDIKKLEKFIKSPGDLKFDLDTAISMCRQSGYYDQAIYLAE 501
                 5889999999***********9999**********************965 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.1   0.00011      0.11       1      22 [.     391     412 ..     391     417 .. 0.94
   2 ?   -0.8   0.0       1.2   1.2e+03       3      15 ..     486     498 ..     485     499 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00011
      TPR_11   1 GdayyeqGkyeeAieaYkkAlk 22 
                 Gd +y++ +y++A+++Y kA++
  KHJ35136.1 391 GDFLYQKADYDGAMQQYLKAIE 412
                 7889****************97 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.2
      TPR_11   3 ayyeqGkyeeAie 15 
                 ++++ G y++Ai 
  KHJ35136.1 486 MCRQSGYYDQAIY 498
                 57999******95 PP

>> ANAPC3  Anaphase-promoting complex, cyclosome, subunit 3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1      0.33   3.3e+02       5      50 ..     361     412 ..     358     421 .. 0.61
   2 ?   10.1   0.9   0.00074      0.73       2      80 ..     426     501 ..     425     503 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.33
                 HHHHHHHHHHHH.HHH--HHH....HHH.HHHHHHHTT-HHHHHHHHHCT.S CS
      ANAPC3   5 yknAiflaerllaaetesped....ayl.lAlclylngqykrAyellrka.k 50 
                 y+  +f++   la+++ ++++    ++  ++  ly+  +y+ A++ + ka +
  KHJ35136.1 361 YQRNLFVLAISLAQKSGMDSAnqniIFRkYGDFLYQKADYDGAMQQYLKAiE 412
                 666666666666422222222222233367999**********999988833 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00074
                 TT-HHHHHHHHHHHH.HHH--HHHHHHHHHHHHHTT-HHHHHHHHHCTSHHHC-HHHHHHHH.HHHHHTT-HHHHHHHH- CS
      ANAPC3   2 qnnyknAiflaerllaaetespedayllAlclylngqykrAyellrkaklnskslgcrylfA.qcllkLkkyeeAiaaLe 80 
                 +++++n i ++e l++ ++ +++++ ll  c+ ++++ k+  +++++      +l+  + +A   + + + y++Ai + e
  KHJ35136.1 426 TQRIHNLIEFLEELHEHHKANSDHTTLLLNCYAKLKDIKKLEKFIKSP----GDLKFDLDTAiSMCRQSGYYDQAIYLAE 501
                 688999*********99999***************************9....8888888888344445588888887655 PP

>> DUF2316  Uncharacterized protein conserved in bacteria (DUF2316)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   0.00028      0.27      27      87 ..     793     851 ..     779     852 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 0.00028
     DUF2316  27 eevaedLnlttekvekvLelkasrledvWilrdyLeekikeqgktpvpfsaLkgdkkeywF 87 
                 +++ +d  + + +v +   l++++++   ++++yL+e+i+ + k+ v+  +L++++++  F
  KHJ35136.1 793 KKIDKDRLMAPLQVIQ--TLSTNAVATMGMVKNYLQETIERERKEIVSNRRLIESYRSETF 851
                 5555555554444444..44556788999*************************9998766 PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   5.0   0.00029      0.29      25      55 .]     881     915 ..     863     915 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00029
     zf-rbx1  25 cpvvlGeCgHaFHlhCiskWlkt....rkvCPlcr 55 
                  p+v   C+H+FH+ C++  ++     + +CP c+
  KHJ35136.1 881 LPIVHFLCKHSFHQTCLNLDIEPdgsiEGSCPSCK 915
                 6888889************99999999999**996 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   0.0     0.013        13       5      29 ..     388     412 ..     386     421 .. 0.87
   2 ?    1.4   0.0      0.79   7.9e+02       6      37 ..     738     769 ..     734     775 .. 0.73

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.013
      TPR_14   5 lalaeallalGdpdeAiallrrala 29 
                 ++++++l++  d+d+A++ + +a++
  KHJ35136.1 388 RKYGDFLYQKADYDGAMQQYLKAIE 412
                 689*****************99998 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.79
      TPR_14   6 alaeallalGdpdeAiallrralalaPddaea 37 
                 ++ + +    d+++Ai++l+++ +  P+   a
  KHJ35136.1 738 DIFRSYTSIKDTRGAIKALEKYGSEEPQLYPA 769
                 556677777899*********98888875444 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   4.6   0.00068      0.67      20      51 ..     887     916 ..     871     917 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00068
                 TTSCEEETTTSSSTHSHHSHHSSTBSSTTTHT CS
         PHD  20 gCkrwfHqkClkppleseekpegewlCekCke 51 
                  Ck++fHq+Cl+++ e++   e    C++Ck+
  KHJ35136.1 887 LCKHSFHQTCLNLDIEPDGSIE--GSCPSCKK 916
                 6*************99666665..78****96 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   5.1     0.001         1       1      39 []     872     912 ..     872     912 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.001
  zf-RING_UBOX   1 CpIClelftdPlv..lpCGHtFCreClw.elskslegafkCP 39 
                   C  C  +++ P+v  l C H+F++ Cl  ++ ++++ + +CP
    KHJ35136.1 872 CQFCGLQLSLPIVhfL-CKHSFHQTCLNlDIEPDGSIEGSCP 912
                   7778888888945345.**********657777777777777 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   5.0    0.0015       1.5       1      41 []     872     914 ..     872     914 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0015
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHC..TSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilks..rkkvkCPlC 41 
                 C+ C   ++ p     CkHsf+++C+   ++   + + +CP C
  KHJ35136.1 872 CQFCGLQLSLPIVHFLCKHSFHQTCLNLDIEPdgSIEGSCPSC 914
                 7778777777777889***********999997777777***9 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.6   0.3    0.0047       4.7       6      29 ..     389     412 ..     385     414 .. 0.90
   2 ?    0.1   0.1       1.2   1.2e+03      11      26 ..     487     502 ..     486     502 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.0047
       TPR_2   6 nlGlayyklgdyeeAleafekAle 29 
                   G+ +y++ dy+ A + + kA+e
  KHJ35136.1 389 KYGDFLYQKADYDGAMQQYLKAIE 412
                 67999*****************98 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 1.2
       TPR_2  11 yyklgdyeeAleafek 26 
                 ++++g y++A+ + ek
  KHJ35136.1 487 CRQSGYYDQAIYLAEK 502
                 5789999999988776 PP

>> Zn_ribbon_17  Zinc-ribbon, C4HC2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.3         2     2e+03      43      49 ..     218     224 ..     214     227 .. 0.68
   2 ?   10.5   3.1   0.00037      0.37       3      47 ..     868     913 ..     866     915 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 2
  Zn_ribbon_17  43 aeCpsGC 49 
                   + C++GC
    KHJ35136.1 218 TGCAVGC 224
                   5677777 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00037
  Zn_ribbon_17   3 llksCayCelavkgrvvlcgvCeHvlHasCarewfendd..laeCps 47 
                   ++ +C++C l++    ++   C+H  H+ C++   e d    ++Cps
    KHJ35136.1 868 NNTHCQFCGLQLSL-PIVHFLCKHSFHQTCLNLDIEPDGsiEGSCPS 913
                   5789*******985.566789***********999999877788987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (967 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       879  (0.0490267); expected 358.6 (0.02)
Passed bias filter:                      639  (0.0356406); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              18  [number of targets reported over threshold]
# CPU time: 0.75u 0.27s 00:00:01.02 Elapsed: 00:00:00.43
# Mc/sec: 6696.91
//
Query:       KHJ35137.1  [L=336]
Description: putative mitochondrial carrier [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-49  166.4   2.7    2.4e-16   59.4   0.1    3.1  3  Mito_carr      Mitochondrial carrier protein
  ------ inclusion threshold ------
      0.061   13.3   0.0       0.11   12.5   0.0    1.5  1  Dimerisation2  Dimerisation domain


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.4   0.1   2.7e-20   2.4e-16       8      93 ..      50     135 ..      45     138 .. 0.95
   2 !   46.7   0.1   2.4e-16   2.2e-12       4      94 ..     147     239 ..     144     242 .. 0.89
   3 !   59.1   0.0   3.4e-20     3e-16       6      87 ..     247     329 ..     244     332 .. 0.90

  Alignments for each domain:
  == domain 1  score: 59.4 bits;  conditional E-value: 2.7e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   8 ellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                  ++ Gg++g++at+v++P+d+vK+rlq++++ +++  +a+ l+v ++i+ +  ++ ly Gl++ +lr+a+++ +++++++t+ + l
  KHJ35137.1  50 PFINGGVSGILATTVIQPIDMVKVRLQLAGEGARTGPKASPLSVTREIISNGKVMDLYTGLSAGILRQAVYTTARLGIFDTIMKKL 135
                 589******************************9999999*****************************************99876 PP

  == domain 2  score: 46.7 bits;  conditional E-value: 2.4e-16
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS..HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa..ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                 ++ ++  aG++ag +a+++ +P d++ +r+q+++ +  ++++++  ++++l++i ++eG++ ++ G +p++ r +  ++ +++++   k+ l+
  KHJ35137.1 147 GFKERAGAGLTAGGLAAILGNPADLALIRMQADGLKPLNERKNYrsVFSALQSIARTEGVTTFWAGGTPTIGRAMALNFGQLAFFSEAKQRLQ 239
                 56677789************************99997666655567**************************************999998876 PP

  == domain 3  score: 59.1 bits;  conditional E-value: 3.4e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS.HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaa.ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlye 87 
                 l+++ a+++ag +a+++  P+d+ Ktrlq q + s+ +  ++ +ld++ k+ +eeG++ +yrG++    r+ap  ++++ + +
  KHJ35137.1 247 LQTFGASAIAGFFASFFSLPFDFTKTRLQKQTRLSNGELPYNgMLDCFAKVAREEGILRFYRGFGTYYARIAPHVMVTMIIAD 329
                 78899**************************998777655556*******************************999987765 PP

>> Dimerisation2  Dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   1.2e-05      0.11      12      48 ..     116     152 ..     102     179 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 1.2e-05
  Dimerisation2  12 SkaLftAceLgvFdlLkeeeplsaeevaeelgasvkG 48 
                     +a++t ++Lg+Fd++ ++  l+a+++ +++g++ ++
     KHJ35137.1 116 RQAVYTTARLGIFDTIMKKLTLRASALGNNIGFKERA 152
                    499**************************99998773 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (336 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       374  (0.0208601); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2689.95
//
Query:       KHJ35138.1  [L=690]
Description: hypothetical protein EV44_g1589 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   7.2e-118  393.1   0.0   9.7e-118  392.7   0.0    1.2  1  Ran-binding  RanGTP-binding protein
     0.0045   16.8   0.1       0.01   15.7   0.1    1.5  1  HeLo         Prion-inhibition and propagation


Domain annotation for each model (and alignments):
>> Ran-binding  RanGTP-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  392.7   0.0  1.1e-121  9.7e-118       1     311 [.       4     367 ..       4     368 .. 0.95

  Alignments for each domain:
  == domain 1  score: 392.7 bits;  conditional E-value: 1.1e-121
  Ran-binding   1 mdelLakvgsqavsfAirsGislassyaikqvsrllkkvpedkkerkeleklqkkLeskikiispaidLieliaarGntsLesaveLtksLkkeieel 98 
                  m+++Lakv+++a+++AirsGi +++s+ai+q+srll++v+ d+++++el +lq++L+ski+iispaidLieli+arGnt+Lesav+Lt++L+++i++l
   KHJ35138.1   4 MEDFLAKVTQHAMNYAIRSGIGITASFAISQTSRLLRTVS-DQTDYRELYTLQERLDSKIRIISPAIDLIELISARGNTTLESAVALTRALRWDIQSL 100
                  9**************************************9.8888***************************************************** PP

  Ran-binding  99 gerleeaaekeekskk.......keeekeelkkviedikeLLkrieeaiPllnLalttsGaslstslpksvSpsrLLqAstflsaadtqfaadkskev 189
                  g rle+aa++eeks++          +k+e++++++dik+L+ rie+a+Pl+nLa+ttsG++lst+lp+svSpsrLLqAstfl+a+d+q+  ++ +++
   KHJ35138.1 101 GVRLEKAANAEEKSRNkndrtsfLLVHKNEVEQIVNDIKRLILRIEDAVPLINLAITTSGVNLSTTLPPSVSPSRLLQASTFLTAGDSQYFISPGSHI 198
                  ************9988888777767799********************************************************************** PP

  Ran-binding 190 qvGptFtlslYslFaghsk.ekekeeeerkitWkEvlakarvkllrvpleal................................akskkkeyaYeLei 254
                  q+GptFtl+lY+lFagh +  +++e+ +r++tWkEv++ka+vkl+r +++ l                                + + ++ey+Y+Lei
   KHJ35138.1 199 QIGPTFTLTLYMLFAGHLHpLNYDEDGIRETTWKEVIHKAKVKLMRSSISGLeddklkqkgsdefqaipfldpnaknpesspvnEYRLQNEYSYYLEI 296
                  *****************87257788889******************88777799****************************98667899******** PP

  Ran-binding 255 iedldDgryHdeeee..kpkkle.........sipikqisklfysasGklLnle...eenspvLllkrdkk 311
                  iedl+D+r+H++e+   +p+++           +pi qi k+fy+++Gk+Ln++   e+n+pvLllkrd +
   KHJ35138.1 297 IEDLEDDRVHSQEDGesQPGPFGgvnlagireYFPIYQIGKIFYADTGKILNIGsmeEANRPVLLLKRDIN 367
                  ************99866777777********99********************999999*********987 PP

>> HeLo  Prion-inhibition and propagation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.7   0.1   1.1e-06      0.01      79     177 ..      35     150 ..      20     163 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 1.1e-06
                 HHHHHHHHHHHHHHHHHHHHH--CGG.........................G-B--GGGS-HHHHHHH.HHHHHHHHHS----S-----EEE-SHHHHH CS
        HeLo  79 leqiealleefeklqeryglklekqdass..................sslalssereksfraefellkrlmrkaakkrqkrtslpkrlrWaivdkkkfe 159
                  +++ +++++ +  +e y l++  +++                     +l+ +   ++++r  +++l  + +kaa++++k+++  +r+++ +v+k++ e
  KHJ35138.1  35 TSRLLRTVSDQTDYRELYTLQERLDSK-IriispaidlielisargnTTLESAVALTRALRWDIQSLGVRLEKAANAEEKSRNKNDRTSFLLVHKNEVE 132
                 567777888888888888888875553.35899999988888888886666667777777777777775689999************************ PP

                 HHHHHHHHHHHHHHHTTT CS
        HeLo 160 elvkdlkelvdsLeeLlp 177
                 + v+d+k l+ ++e+ +p
  KHJ35138.1 133 QIVNDIKRLILRIEDAVP 150
                 **********99998887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (690 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       590  (0.0329076); expected 358.6 (0.02)
Passed bias filter:                      324  (0.0180713); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.25s 00:00:00.80 Elapsed: 00:00:00.38
# Mc/sec: 5464.61
//
Query:       KHJ35139.1  [L=397]
Description: putative trna (uridine-2 -o-)-methyltransferase trm7 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.4e-62  208.8   0.0    8.8e-62  208.3   0.0    1.2  1  FtsJ      FtsJ-like methyltransferase


Domain annotation for each model (and alignments):
>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  208.3   0.0   4.9e-66   8.8e-62       1     177 []      21     265 ..      21     265 .. 0.94

  Alignments for each domain:
  == domain 1  score: 208.3 bits;  conditional E-value: 4.9e-66
                 CCCCHHHHHHHHHHHHT-S-TT-EEEECT-TTSHHHHHHCCT......................................................... CS
        FtsJ   1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrl........................................................ 43 
                 +r+Rsa+KLl++de+f+lf+ +++vvDl+aaPG+wsqvl++ l                                                        
  KHJ35139.1  21 WRARSAFKLLQLDEEFDLFSDVTRVVDLCAAPGSWSQVLSRVLvkgekfgraawedkeqrsrqdllkifdvgstatqyksdctpeknkisnlaptesgr 119
                 79*************************************888888888888888888888899999999999999999999999988888887766543 PP

                 .T.-SEEEEEESSSSHHHTTEEEECS-CCCSSHHHHHCHCHHH............SSEEEEEE--S-SS-CHHHHHHHHHCCCCHHHHCCHCCCCECCC CS
        FtsJ  44 .gakgkvvavDlqpmaplpgvttiqgditdpetiekikealse............rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpgg 129
                    + k+va+Dlqpm+pl g+ t+++dit+p+t +++++al+             + vdlv+sDgapdv+g hdld y+qsqLl +al+lal +l+pgg
  KHJ35139.1 120 pR-DVKIVAIDLQPMSPLHGIITLRADITHPSTVPLLLNALDAkldsnlkspqacNLVDLVLSDGAPDVTGLHDLDIYIQSQLLFSALNLALCVLRPGG 217
                 21.59**********************************99889********99999****************************************** PP

                 EEEECCCHCCCHHHHHHHHHCCEEEEEEEE-SS--CCG-EEEEEEEEC CS
        FtsJ 130 tfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvcrgf 177
                  fv+kifrg++++ l++qlk fFe+v v+kP+ssr +s e+f+vc++f
  KHJ35139.1 218 KFVAKIFRGRNVDLLFAQLKIFFERVIVAKPRSSRASSIEAFVVCLNF 265
                 **********************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.35
# Mc/sec: 3369.96
//
Query:       KHJ35140.1  [L=282]
Description: hypothetical protein EV44_g3862 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       330  (0.0184059); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.20s 00:00:00.62 Elapsed: 00:00:00.35
# Mc/sec: 2419.28
//
Query:       KHJ35141.1  [L=529]
Description: putative serine threonine-protein kinase hal4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.5e-50  171.3   0.0    4.3e-50  170.5   0.0    1.3  1  Pkinase      Protein kinase domain
    6.4e-28   97.7   0.0      1e-27   97.1   0.0    1.2  1  Pkinase_Tyr  Protein tyrosine kinase
  ------ inclusion threshold ------
      0.023   14.0   0.0      0.042   13.2   0.0    1.3  1  Kdo          Lipopolysaccharide kinase (Kdo/WaaP) family
      0.053   12.8   0.0      0.086   12.1   0.0    1.3  1  Kinase-like  Kinase-like
      0.081   12.8   0.2          7    6.5   0.0    2.9  3  APH          Phosphotransferase enzyme family
       0.13   11.9   0.0          1    8.9   0.0    2.2  2  FTA2         Kinetochore Sim4 complex subunit FTA2


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.5   0.0   1.5e-53   4.3e-50       4     263 ..     249     515 ..     247     515 .. 0.87

  Alignments for each domain:
  == domain 1  score: 170.5 bits;  conditional E-value: 1.5e-53
                 EEEEEEESSEEEEEEEETTTT...EEEEEEEEECHCHCHHHH..HHHHHHHHHHHHHSCTTB--EEEEEEE.SSEEEEEEE--TTEBHHHHHHHHSS-- CS
     Pkinase   4 leklGeGsfGkVykaveketg...kivAvKkikkekakkkke..kkvlrEikilkklkhpnivrlyevfee.kdelylvleyveggeladllerkgsls 96 
                 +e +G+G+fG V   +++++g   + +AvK+++++ ++ +k+  k++++E  i  +l+hpn+++ ++ +++ k +++ v+ey+ gg+l +l+   g+l+
  KHJ35141.1 249 QEIVGQGAFGIVRISHKRTEGmgeQLYAVKEFRRRPDETEKKysKRLTSEFCISSSLRHPNVIHTLDLLQDsKGDYCEVMEYCAGGDLYSLVLSTGKLE 347
                 5789********88887776433389********9999999899**************************95667889********************* PP

                 HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.....BCTTTSCGGGS-HHHHTTSCB.SHHHHHHHHHHHHHH CS
     Pkinase  97 eeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.....ltsfvgtseYlAPEvlkeney.skkvDvWslGvilye 189
                  +ea  ++kq+++g+ey+H++g+ HrDlKpeN+L+ + g lKitDFG  + ++   +     +t  +g+  Y+APE  +++e+  ++vDvW+ Gvi + 
  KHJ35141.1 348 VAEADCYFKQMMRGVEYMHEMGVAHRDLKPENLLLTTFGSLKITDFGNGECFRMAWEsdahmVTGLCGSAPYIAPEEYTDKEFdARAVDVWATGVIYMA 446
                 ***********************************************998887766667889999*****************9899************* PP

                 HHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGG CS
     Pkinase 190 lltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpy 263
                 + tg+++++  k+++    e+ +  + l+  ++++   p +      +++++ ++l+ +p++R+ta+++l++++
  KHJ35141.1 447 MRTGRHLWRVAKKED---DEFYE--RYLQGRRDEEGYAPIEALQRARCRNVIYSILDPNPSRRITASQVLKSEW 515
                 *********433333...22222..3333344555566666777999************************998 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.1   0.0   3.4e-31     1e-27       4     255 ..     249     510 ..     247     513 .. 0.81

  Alignments for each domain:
  == domain 1  score: 97.1 bits;  conditional E-value: 3.4e-31
                  EEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH...HHHHHHHHHHHHTS-BTTB--EEEEEE.SSSSEEEEEE--TTEBHHHHHHHTCT CS
  Pkinase_Tyr   4 gkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee...keelleeakimkklkhpnivkllgvct.keepllivteyvkgGdLlkfLrkkek 97 
                  ++ +G+GafG V   + + ++   e+  avK ++++ +e+e   +++l++e  i ++l+hpn+++ l +   +++ ++ v+ey++gGdL + + ++  
   KHJ35141.1 249 QEIVGQGAFGIVRISHKR-TEGMGEQLYAVKEFRRRPDETEkkySKRLTSEFCISSSLRHPNVIHTLDLLQdSKGDYCEVMEYCAGGDLYSLVLST-- 343
                  6889******99999988.888889999*****75444433224899************************777789**************99997.. PP

                  TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEET..TTSSEEEETTSSTSGGGGS-HHHHHHSEEEH.HHHHHHHH CS
  Pkinase_Tyr  98 ekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardi..ekddeyvkkeeaklpvkWmapEslkekkfts.ksDvWsfG 192
                   kl++ +  ++  q+ +G+ey++++ + Hrdl   N Ll++    ki+DfG  +      +++ ++ ++   +  ++apE  ++k+f   + DvW+ G
   KHJ35141.1 344 GKLEVAEADCYFKQMMRGVEYMHEMGVAHRDLKPENLLLTTFGSLKITDFGNGECFrmAWESDAHMVTGLCGSAPYIAPEEYTDKEFDArAVDVWATG 441
                  9*************************************************976654214566667788888999************986256****** PP

                  HHHHHHHTTSSGTTTTS..HHHHHHHHHHTTEE.....S-BBTTSBHHHHHHHHHHT-SSGGGS--HHHH CS
  Pkinase_Tyr 193 vllwEiftlgespypgl..kneevleklkegkr.....lekpekcpeelyelmkkcweedpeeRptfsel 255
                  v+ + + t g++ ++    ++ e++e++ +g+r      +  +   ++  +++ + ++ +p++R t s++
   KHJ35141.1 442 VIYMAMRT-GRHLWRVAkkEDDEFYERYLQGRRdeegyAPIEALQRARCRNVIYSILDPNPSRRITASQV 510
                  *9998888.7766544422677899999888773333233334445566778888888888888887776 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   1.4e-05     0.042     123     155 ..     354     386 ..     334     398 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 1.4e-05
         Kdo 123 llkavgrliaklhragvnHadlyaknillqqee 155
                  +k+  r ++ +h++gv H+dl + n+ll + +
  KHJ35141.1 354 YFKQMMRGVEYMHEMGVAHRDLKPENLLLTTFG 386
                 5678889999*******************9866 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   2.9e-05     0.086     146     190 ..     352     395 ..     304     448 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.9e-05
  Kinase-like 146 rlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggfta 190
                    +   q++r + ++++ g+ h +++++nlll   g l++++f++
   KHJ35141.1 352 DCYF-KQMMRGVEYMHEMGVAHRDLKPENLLLTTFGSLKITDFGN 395
                  4444.68999********************************974 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0     0.084   2.5e+02      57      98 ..     310     358 ..     300     369 .. 0.73
   2 ?    6.5   0.0    0.0023         7     164     181 ..     366     383 ..     326     395 .. 0.77
   3 ?    1.7   0.1     0.068     2e+02     206     239 ..     450     483 ..     435     484 .. 0.83

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.084
                 -CT.TBS-EEETTEEEEEEE----EE-SS......HHHHHHHHHHHHHH CS
         APH  57 vla.gdtddeeigllfalieyvpgrsllr......klsaaqlpelleal 98 
                 v++ +d  ++ +g + +++ey+ g +l+       kl  a+++ ++ ++
  KHJ35141.1 310 VIHtLDLLQDSKGDYCEVMEYCAGGDLYSlvlstgKLEVAEADCYFKQM 358
                 44426689999999************99977666666666666555555 PP

  == domain 2  score: 6.5 bits;  conditional E-value: 0.0023
                 S-EEEE-SS-SGGGEEEC CS
         APH 164 lptvllHgDlhpgNllvd 181
                  ++++ H+Dl+p Nll++
  KHJ35141.1 366 HEMGVAHRDLKPENLLLT 383
                 578899**********99 PP

  == domain 3  score: 1.7 bits;  conditional E-value: 0.068
                 HCCHHHCSCHCCCHCHHHHHHHHCS-HHHHCCCG CS
         APH 206 avllrswtseldpeflaallrayeqeaglarlae 239
                 + +l+++  ++d+ef++++l++  +e g+a +++
  KHJ35141.1 450 GRHLWRVAKKEDDEFYERYLQGRRDEEGYAPIEA 483
                 5677788899*************98888887765 PP

>> FTA2  Kinetochore Sim4 complex subunit FTA2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0      0.23   6.8e+02      44      70 ..     271     296 ..     247     308 .. 0.73
   2 ?    8.9   0.0   0.00035         1     176     204 ..     353     381 ..     343     394 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 0.23
        FTA2  44 rgkeYALKlFrfleaeeleeaeedlki 70 
                 +++ YA+K Fr   ++e+e+++++  +
  KHJ35141.1 271 GEQLYAVKEFRRR-PDETEKKYSKRLT 296
                 5789999999988.5566555544444 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00035
        FTA2 176 sqlpkllrdlkklhklgIvvrDlkeenyi 204
                  ++++++r ++ +h+ g+ +rDlk+en++
  KHJ35141.1 353 CYFKQMMRGVEYMHEMGVAHRDLKPENLL 381
                 6899**********************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (529 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       794  (0.0442858); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.24s 00:00:00.84 Elapsed: 00:00:00.42
# Mc/sec: 3812.94
//
Query:       KHJ35142.1  [L=408]
Description: putative low temperature viability protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.2e-119  400.5  18.0   1.4e-119  400.2  18.0    1.0  1  LTV       Low temperature viability protein
  ------ inclusion threshold ------
      0.045   13.6   0.1       0.11   12.3   0.1    1.6  1  RhoGAP    RhoGAP domain


Domain annotation for each model (and alignments):
>> LTV  Low temperature viability protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  400.2  18.0  1.6e-123  1.4e-119       1     381 [.       8     403 ..       8     404 .. 0.88

  Alignments for each domain:
  == domain 1  score: 400.2 bits;  conditional E-value: 1.6e-123
         LTV   1 dkkkAvtFqlvhRsqnDpliaDedApqhVLvpvekpnkkkkkkskklkdleselkse.kevrknegeaakyGiyFDDseYDYmqHLreigs...eavfv 95 
                 dkk+A +F+lvhR+qnDpli+D +A++ VL+p+      +++kskkl+dle el+ e k++r negeaa++Gi++DDseYDYmqHLr++g+   e++fv
  KHJ35142.1   8 DKKSAAHFTLVHRPQNDPLIHDSSASSLVLNPTPIL---NSNKSKKLNDLEVELGPEiKNIRYNEGEAANHGIFYDDSEYDYMQHLRDLGNgtgESYFV 103
                 8********************************995...5899999***************************************************** PP

         LTV  96 eakkkkkkkekgkkkkkkkledll..........lllpssvlpsefeekvtlqdqqkvpdeiaGfqpDmDPrLRevleaLedeayvddeeeeedDiFae 184
                 ea++ ++ ++kgk+  k++l+++l          +ll++++lps++ +++t+q+qq+vpd++aG+qpDmDPrLRevl aLed++y+d+    +dDiF e
  KHJ35142.1 104 EASS-SRARNKGKE--KQSLDEALknvnlkdqtnELLEQDILPSKNLRHMTYQAQQDVPDALAGLQPDMDPRLREVLIALEDDEYIDE----QDDIFCE 195
                 **33.333344443..56777777778899**9999***************************************************7....89***** PP

         LTV 185 lakdgeevdeeefe....eeeddewdsdatekadeqpkk........edeeeeeedeenedweadfakfkkeekksr.eadddeeeseeqssvaekrkk 270
                 lakd++evdeeef     e+e+ +wdsd t+k+++++++         + ++e ed+ + +w+a+f++ kke+k +  + +++ ++s+ +++++  r+k
  KHJ35142.1 196 LAKDNQEVDEEEFIrsqwEDEEADWDSDTTAKPKKEYDEtssqhtsmCEVNNELEDHGDGAWMANFHNLKKEHKLRSiPVESSLASSAMTRTTNGIRRK 294
                 *************99999888***********95555556777898855568899*****************998774333333333333333335*** PP

         LTV 271 krkGAltdfseySmtSSalaRteqltlLDdrFekleekYdddeeeeedeeel.eeevdmksvvs..ersDfesilddflnnYekegkkrkvlkkkeekk 366
                 krkGAlt++s+ySmtSS+++Rte+lt+LD+rFek+ee+Y++d +e  + ++l  ++v +++  +   r+D+esi+d+fl+nY+++gk  k+lk++++++
  KHJ35142.1 295 KRKGALTNPSSYSMTSSSIFRTEGLTTLDARFEKIEEQYNEDMDEMASVSQLsVRSVASSN--QqyVREDLESIMDEFLGNYSMSGK--KHLKRGKHQN 389
                 ***************************************9999888877776334444444..156********************9..99******** PP

         LTV 367 elkqladevrkerrs 381
                 +++ql de+rke+++
  KHJ35142.1 390 GIEQL-DEIRKELGP 403
                 *****.*******97 PP

>> RhoGAP  RhoGAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   1.3e-05      0.11      14      83 ..     306     378 ..     304     405 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 1.3e-05
                 HTTTSTTTTTS-S-H...HHHHHHHHHHHHTGGGCTTTTTSCHHHHHHHHHHHHHHSSSTTTTGGHHHHHHHH CS
      RhoGAP  14 rgldtegiyRvsgsk...arvkelreafdkgkavdsdleeedvhavaslLKrfLrelpepLltkelyeeliea 83 
                 + +++  i+R +g +   ar+++++e+++++ ++  ++++ +v +vas   ++ re  e+++ + l +  ++ 
  KHJ35142.1 306 YSMTSSSIFRTEGLTtldARFEKIEEQYNEDMDEMASVSQLSVRSVASSNQQYVREDLESIMDEFLGNYSMSG 378
                 6789999*****986222699************999********************99999987766666653 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (408 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1225  (0.0683251); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.23s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 2980.61
//
Query:       KHJ35143.1  [L=187]
Description: putative csep0407 effector protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.026   14.8   0.0       0.04   14.2   0.0    1.3  1  Head_binding  Head binding


Domain annotation for each model (and alignments):
>> Head_binding  Head binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   2.2e-06      0.04      19      79 ..      26      88 ..      11     106 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.2e-06
                  -SSSSSB-TTEEEEEESTTS-TTSGGGB--EEEE-TTS-EEEE-SSEEE-TT..SSEEETTEE CS
  Head_binding 19 larkfkaaangkiyigkidtdpvipenqiqvyienedgstvpvaqpliinaa..gypvyngqi 79
                     +f++   gk++ g +  + v+ + + +v+   +dg+  p a p  i +a  g  vyn + 
    KHJ35143.1 26 AIPEFRTKLSGKVFYGPVSENAVTVDFRRNVHATAQDGADSPAAAPATIPEArcGSHVYNSDY 88
                  456899999**************************************997654499****864 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       273  (0.0152267); expected 358.6 (0.02)
Passed bias filter:                      251  (0.0139997); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1414.34
//
Query:       KHJ35144.1  [L=283]
Description: putative ww domain binding protein 11 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.1e-22   77.3  13.7    9.1e-22   77.3  13.7    2.1  2  Wbp11     WW domain binding protein 11
  ------ inclusion threshold ------
      0.022   14.1   0.5      0.035   13.4   0.5    1.3  1  ApoL      Apolipoprotein L


Domain annotation for each model (and alignments):
>> Wbp11  WW domain binding protein 11
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.3  13.7     1e-25   9.1e-22       2      78 .]       5      82 ..       4      82 .. 0.98
   2 ?   -2.5   0.1      0.78     7e+03      63      70 ..     121     128 ..     108     139 .. 0.67

  Alignments for each domain:
  == domain 1  score: 77.3 bits;  conditional E-value: 1e-25
       Wbp11  2 KslnPadaaRKaqrkkelkKnKkerqkareaklakkdpdeleeeiekLeelessg.kldaadkkklekLekelkavkk 78
                Ks+nPa+a+RKa+++k++kK K+e +++r++kla+++pd+l++++++L+++e++g  l++++k+ le Leke++av+k
  KHJ35144.1  5 KSVNPAQAQRKAEKAKAIKKSKAEAAARRNEKLARRNPDRLQKQLDDLKAIENKGiGLTNHEKNVLEGLEKEIRAVRK 82
                9**************************************************************************987 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.78
       Wbp11  63 kkklekLe 70 
                 ++++e+Le
  KHJ35144.1 121 RQRREELE 128
                 34444444 PP

>> ApoL  Apolipoprotein L
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.5   3.9e-06     0.035     149     215 ..      20      86 ..      12     108 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.9e-06
        ApoL 149 siveessnssakaeasrlvststdklkvvkevleentpkvlslakkvvqvlkeieknirAlrlakan 215
                 + +++s+  +a  + ++l+  + d+l++  + l+ ++ k + l+++  +vl+++ek+irA+r a+ +
  KHJ35144.1  20 KAIKKSKAEAAARRNEKLARRNPDRLQKQLDDLKAIENKGIGLTNHEKNVLEGLEKEIRAVRKARES 86 
                 5567777788888888999999999999999*********************************976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (283 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1206  (0.0672653); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2167.85
//
Query:       KHJ35145.1  [L=660]
Description: putative agc ndr protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.6e-60  204.0   0.0    2.6e-59  200.7   0.0    2.1  1  Pkinase        Protein kinase domain
    6.5e-27   94.4   0.5    2.5e-19   69.6   0.0    2.2  2  Pkinase_Tyr    Protein tyrosine kinase
    0.00017   22.2   1.3    0.00052   20.7   1.3    1.9  1  Pkinase_C      Protein kinase C terminal domain
     0.0072   15.7   0.1      0.023   14.0   0.0    1.8  2  Kinase-like    Kinase-like
  ------ inclusion threshold ------
      0.016   15.1   0.1       0.21   11.5   0.1    2.3  2  APH            Phosphotransferase enzyme family
      0.035   13.0   0.0      0.058   12.3   0.0    1.4  1  Haspin_kinase  Haspin like kinase domain
      0.069   12.5   0.2       0.18   11.1   0.0    1.7  2  Kdo            Lipopolysaccharide kinase (Kdo/WaaP) family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  200.7   0.0     1e-62   2.6e-59       2     264 .]     259     561 ..     258     561 .. 0.93

  Alignments for each domain:
  == domain 1  score: 200.7 bits;  conditional E-value: 1e-62
                 EEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH.HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   2 ekleklGeGsfGkVykaveketgkivAvKkikkekakkkke.kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                 + l+++G+G++G+V+ a +k+t++  A+K+++k+   k +e ++vl+E  il + k++ +vrl+++f++++++yl +eyv+gg++ +ll++ g+l++++
  KHJ35145.1 259 QILTQVGQGGYGQVFLAQKKDTREVCALKVMSKKLLFKLDEvRHVLTERDILTSAKSEWLVRLLYSFQDEKSIYLAMEYVPGGDFRTLLNNTGVLANRH 357
                 67899*******************************999999********************************************************* PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS............................................B CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk............................................l 154
                 a++++++++ +++ lH+ g iHrDlKpeN+Lid++g++K+tDFGla+ +    k                                            +
  KHJ35145.1 358 ARFYIAEMFCSVDALHQLGYIHRDLKPENFLIDSTGHVKLTDFGLAAGFLAPGKiesmrvklekvgekyvpfskpmnqrtiaerregyrsmrdkdvnyA 456
                 ***********************************************999988889******************************************* PP

                 CTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS.-HHHHHHHHHHT-SSGCCS CS
     Pkinase 155 tsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeasei.seeakdllkkllkkdpkkR 252
                 +s+vg+++Y+APEvlk+++y+ +vD+WslG++ ye ltg ppf+g++ +e ++k+l++    ++ l  t+  ++ ++ + s+   ++++ +++   k+ 
  KHJ35145.1 457 KSIVGSPDYMAPEVLKGEDYDYSVDYWSLGCMHYEALTGFPPFAGSNVDE-TWKNLKH---WREAL--TRPVWEDPNYFiSNRTWHFITCCITSRAKRF 549
                 ********************************************888877.5666666...44444..234555555435************9999888 PP

                 TTHHHHHTSGGG CS
     Pkinase 253 ltaeellqhpyl 264
                  +++e+ +h+y+
  KHJ35145.1 550 SSINEVYEHQYF 561
                 88*********8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.6   0.0   9.6e-23   2.5e-19       2     151 ..     259     404 ..     258     420 .. 0.88
   2 !   23.0   0.1   1.6e-08   4.1e-05     160     242 ..     454     535 ..     445     555 .. 0.77

  Alignments for each domain:
  == domain 1  score: 69.6 bits;  conditional E-value: 9.6e-23
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTT CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekek 99 
                  ++ +++G+G +G+V+ ++ k+++e   +kV+ K+l    + +e +++l+e +i+++ k + +v+ll    +e+++++ +eyv+gGd+++ L+++    
   KHJ35145.1 259 QILTQVGQGGYGQVFLAQKKDTREVCALKVMSKKL--LFKLDEVRHVLTERDILTSAKSEWLVRLLYSFQDEKSIYLAMEYVPGGDFRTLLNNT--GV 352
                  56789*************99444444444444444..45666789**********************************************997..88 PP

                  SBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHE CS
  Pkinase_Tyr 100 ltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLar 151
                  l  ++   +++++ + ++ L++  ++Hrdl   N L++++ +vk++DfGLa 
   KHJ35145.1 353 LANRHARFYIAEMFCSVDALHQLGYIHRDLKPENFLIDSTGHVKLTDFGLAA 404
                  8888888889999999**********************************96 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 1.6e-08
                  EETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT CS
  Pkinase_Tyr 160 vkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcw 242
                  + +++   +  +mapE+lk + +  + D Ws G + +E +t g  p++g +  e+ ++lk+ ++  +   +++  y + ++ w
   KHJ35145.1 454 NYAKSIVGSPDYMAPEVLKGEDYDYSVDYWSLGCMHYEALT-GFPPFAGSNVDETWKNLKHWREALTRPVWEDPNYFISNRTW 535
                  44555666789******************************.********999999999776554444445555555555555 PP

>> Pkinase_C  Protein kinase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   1.3     2e-07   0.00052       1      46 []     580     631 ..     580     631 .. 0.94

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 2e-07
   Pkinase_C   1 vesdeDtsNFDpeFTeedprdtppddm.......pagspltssvqenFrGFtY 46 
                 ++s++D  +FD +F +e  + ++++ +       ++ ++ ++     F+GFt+
  KHJ35145.1 580 LDSETDAGYFD-DFSNEADMAKYKEVHdkqaaleNMADREDQMSKSLFVGFTF 631
                 58*********.******999999999999999999999999999*******9 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.93   2.4e+03      20      46 ..     264     290 ..     258     292 .. 0.86
   2 !   14.0   0.0   9.1e-06     0.023     143     189 ..     356     401 ..     347     404 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.93
  Kinase-like  20 lkkgdrsvvfevkdqetgeplavkvfl 46 
                  +++g+ + vf+++ + t e  a+kv +
   KHJ35145.1 264 VGQGGYGQVFLAQKKDTREVCALKVMS 290
                  57788899***************9975 PP

  == domain 2  score: 14.0 bits;  conditional E-value: 9.1e-06
  Kinase-like 143 tiarlllTlqlirlaanLqakglvhgkftvdnllldekgglmlggft 189
                   +ar ++ +++   +  L+++g +h +++++n+l d  g ++l++f+
   KHJ35145.1 356 RHARFYI-AEMFCSVDALHQLGYIHRDLKPENFLIDSTGHVKLTDFG 401
                  5788888.778888999****************************96 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0      0.12     3e+02      45      84 ..     308     345 ..     261     375 .. 0.55
   2 ?   11.5   0.1   8.2e-05      0.21     164     196 ..     373     403 ..     353     404 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.12
                 HHHHHTT-..B--B-CTTBS-EEETTEEEEEEE----EE-SS CS
         APH  45 rlLakagv..pvPevlagdtddeeigllfalieyvpgrsllr 84 
                 + L  a+    v ++l+   + +++   ++++eyvpg ++++
  KHJ35145.1 308 DILTSAKSewLV-RLLY---SFQDEKSIYLAMEYVPGGDFRT 345
                 333333333233.6666...66666668899*****999987 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 8.2e-05
                 S-EEEE-SS-SGGGEEEC..TTEEEEE---TT- CS
         APH 164 lptvllHgDlhpgNllvdpddgrvtGviDfeda 196
                  + + +H+Dl+p N+l+d++++    + Df++a
  KHJ35145.1 373 HQLGYIHRDLKPENFLIDSTGHVK--LTDFGLA 403
                 57889*************665444..7788776 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   2.3e-05     0.058     225     254 ..     374     403 ..     252     416 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 2.3e-05
  Haspin_kinase 225 kfeFEHRdLhldniLvdknlnvtlidlkls 254
                    ++ + HRdL+ +n L+d++++v l d+ l+
     KHJ35145.1 374 QLGYIHRDLKPENFLIDSTGHVKLTDFGLA 403
                    56788*********************9876 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       1.8   4.7e+03      29      55 ..     159     186 ..     153     195 .. 0.77
   2 ?   11.1   0.0     7e-05      0.18     130     166 ..     368     400 ..     340     409 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1.8
         Kdo  29 naalrkyyrggllgklskdlyrfk.lgr 55 
                 + + +ky  ++ +  + +d ++ + ++r
  KHJ35145.1 159 ETNASKYNTKRVITTIEHDILQKPhVKR 186
                 5778899999999999999887765555 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 7e-05
         Kdo 130 liaklhragvnHadlyaknillqqeeeeeaeiwliDl 166
                  +  lh++g  H+dl + n+l++ ++    ++ l D+
  KHJ35145.1 368 SVDALHQLGYIHRDLKPENFLIDSTG----HVKLTDF 400
                 6789********************99....7777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (660 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       632  (0.0352502); expected 358.6 (0.02)
Passed bias filter:                      484  (0.0269954); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.62u 0.25s 00:00:00.87 Elapsed: 00:00:00.39
# Mc/sec: 5059.96
//
Query:       KHJ35146.1  [L=140]
Description: putative mitochondrial import inner membrane translocase subunit tim-16 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-34  116.5   0.7    8.6e-34  116.3   0.7    1.0  1  Pam16     Pam16
  ------ inclusion threshold ------
      0.011   15.0   0.3      0.012   14.8   0.3    1.1  1  DUF1682   Protein of unknown function (DUF1682)


Domain annotation for each model (and alignments):
>> Pam16  Pam16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.3   0.7   9.6e-38   8.6e-34       1     123 [.       1     127 [.       1     131 [. 0.85

  Alignments for each domain:
  == domain 1  score: 116.3 bits;  conditional E-value: 9.6e-38
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXX.XXXXXXXXXXXXXXXX-HHHHHHHHT--G....--SHHHHHHHHHHHHHHT-CCCTS-HH CS
       Pam16   1 makraalkvivagtqvvgkalaralrqeiaaaraaadartsasereaaksnlkGisleeslkilnvee....dlnreevekryehlfevndkskGGsly 95 
                 ma+r++ +v+++g++v+g+al +a++q+ a++  a+    +  + ++ +   +G++l+e++kilnv+      +++ee+ +r++ lf+ nd +kGGs+y
  KHJ35146.1   1 MAHRIITQVVIIGSRVLGRALFEAYKQASASSAYAKAQARNPYNASSINLSSHGLTLDEACKILNVKPpksgSMDTEELMERFKKLFDANDPKKGGSFY 99 
                 9***************************9666554444344445555566666*************9877778999*********************** PP

                 HHHHHHHHHHHHHHHHHHHH-XXXXXXX CS
       Pam16  96 lqskvfrakerldeelkieekeekkkee 123
                 lqskv+ra+er++ e+k+ ++++++ ee
  KHJ35146.1 100 LQSKVLRARERIEAEVKQAQEKARREEE 127
                 ****************887766665554 PP

>> DUF1682  Protein of unknown function (DUF1682)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.3   1.4e-06     0.012     217     286 ..      61     128 ..      32     138 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.4e-06
     DUF1682 217 rlilslrlpssssdleelspllklvlrliDklakraklrpevlkklkktReevekklkkeaeeekaEeaq 286
                 + il+++ p+s s   ++++l++ + +l+D+   +   +   ++k+ ++Re++e+++k+++e++++Ee  
  KHJ35146.1  61 CKILNVKPPKSGS--MDTEELMERFKKLFDANDPKKGGSFYLQSKVLRARERIEAEVKQAQEKARREEEL 128
                 5578899998865..555566666666666655334456777889999****************999865 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (140 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       960  (0.0535445); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1119.17
//
Query:       KHJ35147.1  [L=415]
Description: putative branched-chain-amino-acid aminotransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.1e-34  117.8   0.0    7.6e-34  117.5   0.0    1.1  1  Aminotran_4  Amino-transferase class IV


Domain annotation for each model (and alignments):
>> Aminotran_4  Amino-transferase class IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  117.5   0.0   4.3e-38   7.6e-34       2     223 .]     115     367 ..     114     367 .. 0.93

  Alignments for each domain:
  == domain 1  score: 117.5 bits;  conditional E-value: 4.3e-38
  Aminotran_4   2 lfEtmrvy.....ngeiffldeHleRLrksaellglelpfdeeelrkileelleannsen.......grlrllvsrgggglgaatsepsvavyvsalp 87 
                  +fE+m++y     n ++f+  ++++R++ksa+++ + ++fde+ +  ++++l+  ++ ++       +++r++++++++ lg  ++ +s++++v+a+p
   KHJ35147.1 115 CFEGMKAYkdragNLRLFRPFQNMARMKKSAARI-ALPTFDESSVVDLISKLVLIDQRFVsgekgysLYIRPTIIGTQSTLG-VGAPSSALLFVIASP 210
                  8*******77755555599************777.7****************************98888*************.*************** PP

  Aminotran_4  88 pgpeseke.....lplvtssdvrrdapsplpgaKtlnyldnvlarreakergadevl.lvdedgnvtEgstsNvfivk......ggelitPplssgiL 173
                   gp++ +      l++++++ vr+++  +  +    ny++++l ++ea++rg+++ l l+ ++ ++tE++t+N+f+v        +elit+pl+++iL
   KHJ35147.1 211 VGPYYPTGfkaisLEATDYA-VRAWPGGVGDKKLGANYAPCILPQLEAAKRGFQQNLwLFGSEEYITEVGTMNMFVVIrdkdtgKKELITAPLDGTIL 307
                  ***********966666666.*********************************8888****************88887****99************* PP

  Aminotran_4 174 pGitrrallelakal....gleveereitlkdle......eadeafltntlrgvlpvrsi 223
                  +G+tr+++l+la+++     ++++er++++ +l       +  eaf ++t++ v pvr+i
   KHJ35147.1 308 EGVTRDSILSLARERllpeEWTISERNLSMHELFesskegRLLEAFGSGTAAVVSPVRNI 367
                  **************9888888999**********888888888**************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (415 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       309  (0.0172346); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.27s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2919.15
//
Query:       KHJ35148.1  [L=301]
Description: putative golgi membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.4e-07   30.2  16.2    2.3e-06   27.5  15.7    2.2  1  Yip1        Yip1 domain


Domain annotation for each model (and alignments):
>> Yip1  Yip1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5  15.7   1.3e-10   2.3e-06       2     161 ..     103     269 ..     102     278 .. 0.83

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 1.3e-10
        Yip1   2 lldPrevfrrlkkepp........ilrapdlallllalltlllgllaslnlgqtlasgeevqgltlssllgaiiggylglllgllllalllhl...... 86 
                  ++++++++++ ++++        +++++dla+++l++  +  +ll+s                 ++ ++g i+g++l   lg + l  +l l      
  KHJ35148.1 103 GVNFDHIWSKTLAVLNplahidqhLMDDSDLAGPILFFFLFGTFLLFS-----------------GKVHFGFIYGLAL---LGSVSLHIILSLmspppl 181
                 589999******************************************.................8999999999999...888888888888555666 PP

        Yip1  87 ....iakllg......gkgs......fkqtlsvvgyallPlilgaliaillllllgtllllvgllaliWslvllylglkaahnlskkkall 161
                     +a+         +  +      f ++lsv+gy+llPl++ +l++i+l l +++ ++++   a+iW+++  ++ + a+ ++   + l+
  KHJ35148.1 182 dalhAARSEPpsphssS--NltscltFPRSLSVLGYCLLPLVFVSLVGIILPLQGMV-GYILTTTAIIWCTYSSSGIFCAVGRMRGMRGLV 269
                 65554444447776541..1446666************************9999997.999999999999999999998888887666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       457  (0.0254894); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.28s 00:00:00.74 Elapsed: 00:00:00.44
# Mc/sec: 2037.23
//
Query:       KHJ35149.1  [L=125]
Description: putative nadh:ubiquinone oxidoreductase subunit protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-13   50.1   0.0    2.8e-13   50.0   0.0    1.2  1  ESSS      ESSS subunit of NADH:ubiquinone oxidoreductase (com


Domain annotation for each model (and alignments):
>> ESSS  ESSS subunit of NADH:ubiquinone oxidoreductase (complex I)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.0   0.0   1.6e-17   2.8e-13      38     100 ..      44     115 ..       8     120 .. 0.79

  Alignments for each domain:
  == domain 1  score: 50.0 bits;  conditional E-value: 1.6e-17
        ESSS  38 hGfdkdpve............dkenmeavfffgvsivlVlgsvfvaYlpdtsiqeWArrEAerllkrREaeglpi 100
                 h  ++dp +            +ke +e ++ +g+ ++l +g v +a++pdtsiq+WA +EA+r+l   E eg+  
  KHJ35149.1  44 HESHYDPPGgwlfgvkpgekrKKEDWEDIWVYGFFGSLAFGVVGYAFKPDTSIQTWALEEARRRL---EIEGILE 115
                 4444442223444444444449*******************************************...9999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (125 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       352  (0.019633); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.41
# Mc/sec: 922.48
//
Query:       KHJ35150.1  [L=316]
Description: hypothetical protein EV44_g2198 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       458  (0.0255452); expected 358.6 (0.02)
Passed bias filter:                      263  (0.014669); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.20s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2482.72
//
Query:       KHJ35151.1  [L=529]
Description: putative ran exchange factor prp20 pim1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-58  194.5   3.3    1.4e-11   44.8   0.0    8.0  7  RCC1      Regulator of chromosome condensation (RCC1) repeat
    5.9e-38  127.9  25.3    1.6e-10   40.5   0.5    6.4  6  RCC1_2    Regulator of chromosome condensation (RCC1) repeat


Domain annotation for each model (and alignments):
>> RCC1  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   1.4e-08   0.00012       4      50 .]     101     156 ..     100     156 .. 0.74
   2 !   23.6   0.0   6.6e-09   5.9e-05       2      50 .]     160     240 ..     159     240 .. 0.72
   3 !   44.8   0.0   1.6e-15   1.4e-11       1      50 []     243     293 ..     243     293 .. 0.96
   4 !   34.4   0.1   2.7e-12   2.4e-08       1      50 []     296     348 ..     296     348 .. 0.86
   5 !   41.0   0.1   2.4e-14   2.1e-10       2      49 ..     352     406 ..     351     407 .. 0.85
   6 !    6.7   0.0    0.0012        11       1      35 [.     410     459 ..     410     471 .. 0.67
   7 !   13.6   0.3   9.1e-06     0.082       1      23 [.     474     496 ..     474     522 .. 0.83

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 1.4e-08
                 EEEEE--GGGTTSSSS-...--EEEEEE-GGGTTS........-EEEEEEETTEEEEE CS
        RCC1   4 VysWGrndyGqLGlgtt...esvlvPtkveglsgn........rvvkvacGddhtval 50 
                 +y +G ++ G LGlg +        P+ v+ ++ n         vv+ a G+ h++al
  KHJ35151.1 101 IYVFGEGSAGELGLGAQkidG--KSPVDVKRPRINprlsaktvGVVQLAVGGMHCAAL 156
                 8*************9998653..3355554443334444449**************97 PP

  == domain 2  score: 23.6 bits;  conditional E-value: 6.6e-09
                 TEEEEEE--GGGTTSS.......................SS---E.........EEEEE-...GGGTTS-EEEEEEETTEEEEE CS
        RCC1   2 GrVysWGrndyGqLGl.......................gttesv.........lvPtkv...eglsgnrvvkvacGddhtval 50 
                  ++++WG nd+G LG+                          + +           P+++   +  +++r+ +v++Gd+ t+al
  KHJ35151.1 160 NKILTWGVNDQGALGReaaqggkmmdiektaqsdsdsdsD--D-NedsglnpneAEPREIdltNIEEDTRFAAVFAGDSTTFAL 240
                 6799****************99998888887665554331..2.1334444433459999774444444*************97 PP

  == domain 3  score: 44.8 bits;  conditional E-value: 1.6e-15
                 TTEEEEEE..--GGGTTSSSS-.--EEEEEE-GGGTTS-EEEEEEETTEEEEE CS
        RCC1   1 dGrVysWG..rndyGqLGlgtt.esvlvPtkveglsgnrvvkvacGddhtval 50 
                 dGrVy+WG  r+++G LG  ++ +++++P++++ l+  +++++acG +h++al
  KHJ35151.1 243 DGRVYGWGtfRGNDGILGFRQDiKTQHKPMLIPELK--NITDIACGTNHVLAL 293
                 9******************88879999********9..*************97 PP

  == domain 4  score: 34.4 bits;  conditional E-value: 2.7e-12
                 TTEEEEEE--GGGTTSSSS---E....EEEEE-GGGTTS-EEEEEEETTEEEEE CS
        RCC1   1 dGrVysWGrndyGqLGlgttesv....lvPtkveglsgnrvvkvacGddhtval 50 
                 +G+V++WG ++++qL +    +     lvP++  gl +++++ + cGd+h++a+
  KHJ35151.1 296 KGKVFTWGAGEQNQLARRVVSRTaagaLVPREF-GLGRKNIKYIGCGDYHSFAI 348
                 59***************7665555566******.66667**************8 PP

  == domain 5  score: 41.0 bits;  conditional E-value: 2.4e-14
                 TEEEEEE--GGGTTSSSS-.......--EEEEEE-GGGTTS-EEEEEEETTEEEE CS
        RCC1   2 GrVysWGrndyGqLGlgtt.......esvlvPtkveglsgnrvvkvacGddhtva 49 
                 G+VysWG n++Gq G +++       ++v +Ptkv++l + ++++++ G++ht+a
  KHJ35151.1 352 GDVYSWGLNTFGQTGVPKEgldeedeNTVQLPTKVKSLGDYKFKQITGGAHHTIA 406
                 9***************777776643233377*******999************98 PP

  == domain 6  score: 6.7 bits;  conditional E-value: 0.0012
                 TTEEEEEE--GGGTTSSSS-....--E...........EEEEE-GGGTTS CS
        RCC1   1 dGrVysWGrndyGqLGlgtt....esv...........lvPtkveglsgn 35 
                 +G+V+ WGr d++q G++ +    e+v            +Pt+++   g 
  KHJ35151.1 410 SGQVLIWGRIDNNQGGIPINnypeENVffdennrprylMKPTQIPDIVGS 459
                 59***************666666533355444466666668888776553 PP

  == domain 7  score: 13.6 bits;  conditional E-value: 9.1e-06
                 TTEEEEEE--GGGTTSSSS---E CS
        RCC1   1 dGrVysWGrndyGqLGlgttesv 23 
                 +G+ ysWG+++++q G+gt+e+v
  KHJ35151.1 474 EGKAYSWGFSSNYQTGQGTDEDV 496
                 799*****************887 PP

>> RCC1_2  Regulator of chromosome condensation (RCC1) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.5   1.4e-07    0.0013       1      29 [.     143     171 ..     143     172 .. 0.95
   2 !   24.4   0.3     2e-09   1.8e-05       2      24 ..     228     250 ..     227     257 .. 0.84
   3 !   25.6   0.1   8.4e-10   7.5e-06       1      26 [.     280     305 ..     280     309 .. 0.88
   4 !   40.5   0.5   1.7e-14   1.6e-10       3      30 .]     337     364 ..     335     364 .. 0.94
   5 !   21.2   0.1     2e-08   0.00018       2      28 ..     395     423 ..     394     424 .. 0.86
   6 !   12.4   0.6   1.1e-05       0.1       4      28 ..     461     485 ..     459     487 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 1.4e-07
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsNsdG 29 
                 V++++ G+ H  aLt d+++l+WG N+ G
  KHJ35151.1 143 VVQLAVGGMHCAALTHDNKILTWGVNDQG 171
                 89***********************9877 PP

  == domain 2  score: 24.4 bits;  conditional E-value: 2e-09
      RCC1_2   2 ksvsaGdyHscaLtedGeVlcWG 24 
                 ++v aGd+ ++aLt+dG+V++WG
  KHJ35151.1 228 AAVFAGDSTTFALTTDGRVYGWG 250
                 5799******************* PP

  == domain 3  score: 25.6 bits;  conditional E-value: 8.4e-10
      RCC1_2   1 VksvsaGdyHscaLtedGeVlcWGsN 26 
                 ++++++G +H +aL++ G+V++WG  
  KHJ35151.1 280 ITDIACGTNHVLALDTKGKVFTWGAG 305
                 689*********************54 PP

  == domain 4  score: 40.5 bits;  conditional E-value: 1.7e-14
      RCC1_2   3 svsaGdyHscaLtedGeVlcWGsNsdGQ 30 
                  + +GdyHs+a++++G+V++WG N++GQ
  KHJ35151.1 337 YIGCGDYHSFAISSTGDVYSWGLNTFGQ 364
                 588************************9 PP

  == domain 5  score: 21.2 bits;  conditional E-value: 2e-08
      RCC1_2   2 ksvsaGdyHscaLtedGeVlcWG..sNsd 28 
                 k++  G+ H++a te+G Vl WG  +N+ 
  KHJ35151.1 395 KQITGGAHHTIACTESGQVLIWGriDNNQ 423
                 79999******************555765 PP

  == domain 6  score: 12.4 bits;  conditional E-value: 1.1e-05
      RCC1_2   4 vsaGdyHscaLtedGeVlcWGsNsd 28 
                 v+ G++  ++++++G+ ++WG  s+
  KHJ35151.1 461 VATGNDTCVVVDTEGKAYSWGFSSN 485
                 899******************6555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (529 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1142  (0.0636957); expected 358.6 (0.02)
Passed bias filter:                      690  (0.0384851); expected 358.6 (0.02)
Passed Vit filter:                        65  (0.00362541); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 3600.65
//
Query:       KHJ35152.1  [L=514]
Description: putative mitochondrial outer membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-47  161.5   0.3      5e-47  161.0   0.3    1.2  1  Bac_surface_Ag  Surface antigen
  ------ inclusion threshold ------
       0.12   13.0   0.1       0.26   11.9   0.1    1.6  1  POTRA           Surface antigen variable number repeat


Domain annotation for each model (and alignments):
>> Bac_surface_Ag  Surface antigen
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.0   0.3   5.6e-51     5e-47       1     324 []     172     513 ..     172     513 .. 0.89

  Alignments for each domain:
  == domain 1  score: 161.0 bits;  conditional E-value: 5.6e-51
                     STSSSS-EEEEEEEESS.SEEEEEEEEEESTSSTTS-EEEEEEEEEEGGGTBS.S-EEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEES---BH CS
  Bac_surface_Ag   1 NllGtGqslslsaslgs.yeqslnlsftePyflgdrvslglslfaresdsdesdsyrtksvgfsvslgrpltenyslslglsvqknkilkdssse 94 
                     N++G ++ l+l+as g+  +++++ +f  P f +++ + gl++fa+ s  + ++s+++ + g+++++    +++++ ++g++    +i+     +
      KHJ35152.1 172 NIFGGAELLNLNASAGTrTRSAYQATFETPLFSDPDKKIGLDIFAS-STLKPWASHEEVNKGVGLRYDWVSKSESRHQIGYTGLWRQITGLATDA 265
                     9***************989999***********************9.89999*9****99999999999999*********98888888877777 PP

                     HHHHHHHSCS--EEEEEEEEEEEEEEEEEESSSSS-SSEEEEEEEEEEE-...TTSSS-EEEEEEEEEEEEESST.....TSSSEE..EEEEEEE CS
  Bac_surface_Ag  95 nnrnvssasklqtgksltsslslslsydtrddalfPtrGvllklrleftg.pllggdvsylkldakasyyvpltk.....ekdlvl..aarvalg 181
                     ++         ++g+s +ss+++ ++ d rd++l+PtrG+llk   e++g ++l gdv +lk++++ ++ +pl       e+ +++   +r  + 
      KHJ35152.1 266 SRTI-----RHEAGDSVKSSITHIWTSDHRDHPLQPTRGYLLKSISEIAGwGPLQGDVGFLKTEIESAFAFPLRVpglkdENGISFtnGFRAGVL 355
                     5553.....589**************************************9**********************8777744333333333344444 PP

                     EEEESS...SS-.--GGG-B-BSSTTSSTEE-TT-BS-EEEEEEE--BSEEEEEEEEEEEE-SSS-GGTTEEEEEEEEEEEEE-TT--TTTTTTS CS
  Bac_surface_Ag 182 yisgyg...tkdelpfyerFyaGGsnsvRGfesgglgprdesgdalGGdsyavaslElrfplpflkkqnsvrlalFfDaGnvwdkegqspsssrs 273
                     y  ++g   ++   ++++rF +GG + vRGf+  glgprd  +d++GGd+ya as+ l +p+p++ k++ +r+++F++aG ++  +g++++ + +
      KHJ35152.1 356 YPIPTGfgkETSPSRINDRFILGGPTDVRGFKISGLGPRDG-QDSVGGDIYAAASTNLLIPFPKTGKDSPLRFQIFANAGRLLALSGERSKETNK 449
                     433444878555599*************************8.***********************98777************9999999997766 PP

                     --TT............TS-EEEEEEEEEEEETTEEEEEEEEEEEE-STT--EE.SEEEEECEEE CS
  Bac_surface_Ag 274 asst............aeirasvGvgLrwqsPlGPlrfdyAiplkkedgdktq.rFqFgiGttF 324
                     +  +                  +GvgL++ +P+++++++++ p+  ++g++ + ++qFg+G  F
      KHJ35152.1 450 LDYRknlvntvseltnGLPSLAAGVGLVYLHPVARFELNFCLPFVLRKGEESRkGLQFGVGINF 513
                     5555999********9889999***************************88777*******988 PP

>> POTRA  Surface antigen variable number repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1   2.8e-05      0.26       1      68 [.      58     127 ..      58     146 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 2.8e-05
                 EEEEEEEEES.SSS-HHHHHTTTSS....STTSBHCHHHHHHHHHHHHHHHHCTT-EE.EE.EEEEHSSTTSE CS
       POTRA   1 vkikkinfeGnkktkdeelrrelel....kegdvynpekleadkealksryanlGyfdasV.qvelpeddedk 68 
                 vki++i+++G ++t+++ l+r+++     k + +++ ++  +  + +++++ + G + +++ ++     + +k
  KHJ35152.1  58 VKISSIQVIGGTQTRQSFLDRLINSigkeKNNTTLTLSEALREADVIADKLSRFGIYHPKIlTYVD---TSEK 127
                 69********99***********744666777888888888888889*************994433...2222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (514 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.26s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 3661.20
//
Query:       KHJ35153.1  [L=266]
Description: putative ubiquitin-conjugating enzyme [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.4e-19   67.8   0.1    1.2e-18   67.1   0.1    1.3  1  UQ_con    Ubiquitin-conjugating enzyme


Domain annotation for each model (and alignments):
>> UQ_con  Ubiquitin-conjugating enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.1   0.1   6.5e-23   1.2e-18       1     113 [.       9     120 ..       9     133 .. 0.90

  Alignments for each domain:
  == domain 1  score: 67.1 bits;  conditional E-value: 6.5e-23
                 HHHHHHHHHHHSTTTTEEEEEEETTEECEEEEEEEB.TTSTTTTEEEEEEEE--TTTTTS--EEEESST-SCTTBETTSBB-CGG..GSTTT--TTSHH CS
      UQ_con   1 rlqkelkelakkkpsgisaklvddenlfewkvlikgpedtpYeggvFklelefpedYPlkpPkvkfvtkifHPnvdksGevcldi..LkeekWspaltl 97 
                 rl++e+k++ +++p+ i a++++  n+ ew+ +++gp+dtpY++g +  +l fp++YP+ pP +++ t+      ++s ++cl+i  ++ ++++pa+++
  KHJ35153.1   9 RLTREYKSILENPPPYIIAHPSEA-NILEWHYILTGPPDTPYHNGQYWGTLIFPTNYPFAPPAIRMHTPS--GRFQPSTRLCLSIsdFHPKSFNPAWEV 104
                 799********************6.****************************************99854..5677899****996677888******* PP

                 HHHHHHHHHHHHS--T CS
      UQ_con  98 esvllsiqsLlaepnp 113
                 +++l+ ++s++++ + 
  KHJ35153.1 105 STILIGLLSFMTSEEM 120
                 *********9977654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (266 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.25s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1979.64
//
Query:       KHJ35154.1  [L=953]
Description: putative scy1 protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-20   73.8   0.0    7.1e-20   71.5   0.0    2.0  1  Pkinase      Protein kinase domain
      3e-11   43.1   0.0    2.9e-10   39.9   0.0    2.3  1  Pkinase_Tyr  Protein tyrosine kinase


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.5   0.0   7.9e-24   7.1e-20      37     264 .]      72     347 ..      39     347 .. 0.77

  Alignments for each domain:
  == domain 1  score: 71.5 bits;  conditional E-value: 7.9e-24
                 HCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEE......................SSEEEEEEE--TTEBHHHHHHHHSS--HH............... CS
     Pkinase  37 akkkkekkvlrEikilkklkhpnivrlyevfee......................kdelylvleyveggeladllerkgslsee............... 98 
                  +++  +++ +E +il++l+hpni++l+e +ee                      k++++                       +               
  KHJ35154.1  72 VNEEVLERLKKEASILARLRHPNILELVEPVEEtrngglqfvteavthslsvllqKKNRWER---------------------Kkvvnknlahnslegk 149
                 3333348999***********************77555555555555555555542222222.....................1122222333344444 PP

                 .............HHHHHHHHHHHHHHHHH.HTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS...................BCTTTSCGGGS CS
     Pkinase  99 .............eakkiakqilegleylH.skgiiHrDlKpeNiLidekgelKitDFGlakelesssk...................ltsfvgtseYl 164
                              e+++ ++qi ++le+lH +++++H  l p+ i+i++k + K++ +G+++  + ssk                    + + +  +Y+
  KHJ35154.1 150 ekyesdkielnefEIQNGIEQISKALEFLHeNACLVHGNLTPDAIIINSKCDWKLSGLGFSSPPDDSSKtssmipinlsealnydarlPQLVQINLDYC 248
                 4444444444444*****************55569***************************999999999****************999999****** PP

                 -HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS.-HHHHHHHHHHT-SSGCCSTTHHHHHTSG CS
     Pkinase 165 APEvlkeneyskkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeasei.seeakdllkkllkkdpkkRltaeellqhp 262
                 +P  + +n++ +++D++slG+++++l +   p ++  + ++  +++++l+++  ++  +++ +   + + ++ +k++l +ll++ p++R+ta+e  q++
  KHJ35154.1 249 SPDFVLDNKINTAADMFSLGLLIVTLHN--SPHESPIKANSSVTNYKRLFSSPSTFPSQNNGFLSSRPLpENLIKSVLPRLLTRWPTDRVTAKEFQQSS 345
                 **************************55..4555444455556667776666666665555555555553555789*********************99 PP

                 GG CS
     Pkinase 263 yl 264
                 ++
  KHJ35154.1 346 FF 347
                 98 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9   0.0   3.2e-14   2.9e-10      41     202 ..      73     278 ..      67     307 .. 0.78

  Alignments for each domain:
  == domain 1  score: 39.9 bits;  conditional E-value: 3.2e-14
                  SHHHHHHHHHHHHHHHTS-BTTB--EEEEEE..SSSSEEEEEE--TTEBHHHHHHHT..........................CTTTSBHHHHHHHHH CS
  Pkinase_Tyr  41 teeekeelleeakimkklkhpnivkllgvct..keepllivteyvkgGdLlkfLrkk..........................ekekltlkdllsfal 110
                  +ee  e+l +ea+i+ +l+hpni++l+  +   +++ l +vte v++ +L+  L+kk                          +k +l+  ++ + + 
   KHJ35154.1  73 NEEVLERLKKEASILARLRHPNILELVEPVEetRNGGLQFVTEAVTH-SLSVLLQKKnrwerkkvvnknlahnslegkekyesDKIELNEFEIQNGIE 169
                  566689999*********************9555566********98.89*****99************************7777777777899999* PP

                  HHHHHHHHHHHTTE.EEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE................EETTSSTSGGGGS-HHHHHHSEEEHHHHHHHH CS
  Pkinase_Tyr 111 qvAkGmeyLeskkl.vHrdlaarNvLlsenkvvkisDfGLardiekddey................vkkeeaklpvkWmapEslkekkftsksDvWsf 191
                  q++k++e+L+++ + vH +l+   ++++++   k+s  G ++   +++++                +  +  ++++ +++p  + ++k+++++D++s 
   KHJ35154.1 170 QISKALEFLHENAClVHGNLTPDAIIINSKCDWKLSGLGFSSPPDDSSKTssmipinlsealnydaRLPQLVQINLDYCSPDFVLDNKINTAADMFSL 267
                  ***********99659*************777777777777655333332222333332222112233345567889********************* PP

                  HHHHHHHHTTS CS
  Pkinase_Tyr 192 GvllwEiftlg 202
                  G l+  + +  
   KHJ35154.1 268 GLLIVTLHNSP 278
                  *9987666543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (953 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       712  (0.0397122); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.46
# Mc/sec: 6191.11
//
Query:       KHJ35155.1  [L=141]
Description: putative te1b-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-05   25.2   0.0    2.1e-05   24.7   0.0    1.2  1  RNase_H   RNase H


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   1.2e-09   2.1e-05      61     142 ..      33     105 ..      13     106 .. 0.68

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 1.2e-09
                 C.....SEEEEEES-HHHHHHHHCCCHHHHHTTSSSETTSSBHTTHHHHHHHHHCHCSSEEEEEE-SCCSSSTHHHHHHHHHHHHHH CS
     RNase_H  61 d.....ekvniytDSkYvvkgitqwvhrwkknawkttseqkpvknkdlaellkelakkkkvqlkwvkgHaGvpkgNemaDrlAkeaa 142
                 +     +++ ++ DS+ +++++++        +   +s+++ v n   ++ + +++++  v++ w++gH+ +   N  aD+lA+ea+
  KHJ35155.1  33 GkdngyTTIYVMLDSSSAINALQS--------GITSSSAGR-VEN---FQMM-ATISDAPVKVVWIPGHEDI-ARNVIADQLAREAL 105
                 233344666677788777774444........665677775.888...3333.4568899************.5**********986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       325  (0.0181271); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1088.52
//
Query:       KHJ35156.1  [L=466]
Description: putative dimethylaniline monooxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.9e-28   99.2   0.0    1.1e-20   73.6   0.0    3.1  3  FMO-like     Flavin-binding monooxygenase-like
      3e-13   49.7   0.0    9.6e-11   41.5   0.0    2.1  2  Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
      6e-12   45.4   0.0    6.2e-10   38.7   0.0    2.1  2  K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
     0.0015   17.8   0.0     0.0044   16.3   0.0    1.6  2  Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase


Domain annotation for each model (and alignments):
>> FMO-like  Flavin-binding monooxygenase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.6   0.0   2.4e-24   1.1e-20      61     218 ..       3     157 ..       1     165 [. 0.88
   2 !    7.0   0.0   0.00038       1.7     320     340 ..     322     342 ..     296     355 .. 0.70
   3 !   15.1   0.0   1.3e-06    0.0059     428     487 ..     371     430 ..     349     441 .. 0.85

  Alignments for each domain:
  == domain 1  score: 73.6 bits;  conditional E-value: 2.4e-24
    FMO-like  61 sskemscfsdfplpedypnflhnsklleylklfakefdllkyiqfkttvcsvkkrpdfstsGqwevvtekegkkesavfdavmvctGhhvnphlplesf 159
                 ssk+++ fsd+  p   p+fl  ++   yl+++ k+f l  +iq+++ v+ v++  d    G   v   + g   +   da+ +c+G hv p++p    
  KHJ35156.1   3 SSKQLTTFSDYRYPIGTPDFLSTEEYCRYLEKYCKHFRLNPFIQLESRVLRVQR-DDTRGPGH-IVHILHAGEVSQWPCDAIAICSGLHVIPNIPE--I 97 
                 79**************************************************86.56555554.466678888888899****************5..9 PP

    FMO-like 160 pGiekfkGqyfhsrdykepevf.kgkrvlviGlGnsggdiav.elsrtaeqvllstrsGsw 218
                 pG+ +   q fhs ++k+   f +gk +l++G G++g dia   +   ++ v ls r G +
  KHJ35156.1  98 PGLSNI-PQNFHSSEFKNSRQFgEGKNILILGSGETGMDIAYlAIKSRTKSVTLSHRDGFF 157
                 ***998.699*********999779****************72456678899****99965 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.00038
    FMO-like 320 didvvifatGytfafpflees 340
                 + d+vi+atGy   f fl++ 
  KHJ35156.1 322 KPDIVILATGYKQCFSFLDDD 342
                 349****************96 PP

  == domain 3  score: 15.1 bits;  conditional E-value: 1.3e-06
    FMO-like 428 qtdyiayldelaaligakpnllslllkdpklalkvffGpcspyqyrlvGpGkweGarkai 487
                   d+ +y  +la  iga p++ ++ll   k ++   +    + ++rlvGp +w+Ga++ +
  KHJ35156.1 371 GVDHESYAYQLALDIGAAPSFTQVLLLGWKTTVSWALSANVNPKFRLVGPWQWNGAKEIM 430
                 5677788899***************************999999*************9754 PP

>> Pyr_redox_3  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.0   2.1e-14   9.6e-11      76     197 ..      21     155 ..       4     167 .. 0.84
   2 !    6.1   0.0    0.0012       5.5     250     278 ..     317     343 ..     295     365 .. 0.66

  Alignments for each domain:
  == domain 1  score: 41.5 bits;  conditional E-value: 2.1e-14
  Pyr_redox_3  76 eklsrkealeYlrevaksfelp..iklfeeVesvkkedeg...fevetske....tyeAkkviiAtGefdkPnklnipGeek..lvkhyskvkefhky 162
                  + ls++e+ +Yl++++k+f+l+  i+l+++V +v+++d+     +v+  ++    +  ++ + i  G   +Pn ++ipG ++  +  h+s++k+ +++
   KHJ35156.1  21 DFLSTEEYCRYLEKYCKHFRLNpfIQLESRVLRVQRDDTRgpgHIVHILHAgevsQWPCDAIAICSGLHVIPNIPEIPGLSNipQNFHSSEFKNSRQF 118
                  57899****************999************7753344777765543455888*********************99755788******99999 PP

  Pyr_redox_3 163 a.gqkvvViGgknSavDaAlelvrk.gaeVtvvtrgs 197
                    g+++++ G +++++D+A+  ++  +++Vt+ +r+ 
   KHJ35156.1 119 GeGKNILILGSGETGMDIAYLAIKSrTKSVTLSHRDG 155
                  76999**************9888765999***99985 PP

  == domain 2  score: 6.1 bits;  conditional E-value: 0.0012
  Pyr_redox_3 250 edgkkvevkddvvlatGykpdlsflkksl 278
                  ++ k+  + d v+latGyk  +sfl++  
   KHJ35156.1 317 KN-KN-LKPDIVILATGYKQCFSFLDDDY 343
                  33.33.45799**************9844 PP

>> K_oxygenase  L-lysine 6-monooxygenase (NADPH-requiring)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.7   0.0   1.4e-13   6.2e-10      91     233 ..      21     162 ..       8     169 .. 0.83
   2 !    4.5   0.0    0.0037        16     324     341 ..     316     333 ..     305     334 .. 0.85

  Alignments for each domain:
  == domain 1  score: 38.7 bits;  conditional E-value: 1.4e-13
  K_oxygenase  91 flpsRkefedYlrWvasqle..eqvrfgeeveevepdeeeee.elltveskdaegeeeelearnlvlgvG..tepkiPevleklegkervvHsseyle 183
                  +++s++e+ +Yl+   +++     ++ +++v +v+ d+ ++  +++++ +   +ge +++ + ++ +  G    p+iPe+   l++ ++ +Hsse+ +
   KHJ35156.1  21 DFLSTEEYCRYLEKYCKHFRlnPFIQLESRVLRVQRDDTRGPgHIVHILH---AGEVSQWPCDAIAICSGlhVIPNIPEIPG-LSNIPQNFHSSEFKN 114
                  68899*************98434599************987656666554...899999999999998885578****9876.66689********** PP

  K_oxygenase 184 rkeellakkriaVvGsGqSaaeifedllrrqkkvelklvtrsealepldd 233
                  ++ +  ++k+i++ GsG ++ +i++ ++++++ ++++l  r   + +   
   KHJ35156.1 115 SR-QFGEGKNILILGSGETGMDIAYLAIKSRT-KSVTLSHRDGFFCAPKR 162
                  99.89*******************99888766.78999999888776555 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.0037
  K_oxygenase 324 geeetlevdavvlATGYr 341
                   ++++l+ d+v+lATGY+
   KHJ35156.1 316 FKNKNLKPDIVILATGYK 333
                  5788999**********8 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   9.8e-07    0.0044      93     174 ..      72     154 ..      20     166 .. 0.71
   2 ?   -1.6   0.0      0.29   1.3e+03      94     109 ..     317     332 ..     294     342 .. 0.63

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 9.8e-07
                  TCEEEEEESEEEE---E..EE-BCTCTTC.TTBEECCSECHHHHHHCCSS-T..SEEEEES-SHHHHHHHHHHHHH.T-EEEEEESS CS
                  xxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxx RF
  Pyr_redox_2  93 gdeekiaydklvlAtGs..sprdlgipGvaenvgklvrtldsaealklkllp..krivvvGgGyiGvElAaalakl.gkevtlvear 174
                  g+  +  +d++ +++G    p+++ ipG+  n  ++   ++s e  ++ +    k+i++ G+G +G+++A  + k   k vtl ++ 
   KHJ35156.1  72 GEVSQWPCDAIAICSGLhvIPNIPEIPGL-SNIPQN---FHSSEFKNSRQFGegKNILILGSGETGMDIAYLAIKSrTKSVTLSHRD 154
                  6667788999******64479999999*9.555444...4444443333333449*****************877725559977664 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.29
                  CEEEEEESEEEE---E CS
                  xxxxxxxxxxxxxxxx RF
  Pyr_redox_2  94 deekiaydklvlAtGs 109
                  ++++++ d ++lAtG 
   KHJ35156.1 317 KNKNLKPDIVILATGY 332
                  3345666666666664 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (466 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       279  (0.0155614); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.36
# Mc/sec: 3919.95
//
Query:       KHJ35157.1  [L=207]
Description: hypothetical protein EV44_g3823 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       633  (0.0353059); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.20s 00:00:00.58 Elapsed: 00:00:00.34
# Mc/sec: 1826.27
//
Query:       KHJ35158.1  [L=394]
Description: putative vacuolar atp synthase subunit c 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   2.8e-120  402.1   0.9   3.2e-120  401.9   0.9    1.0  1  V-ATPase_C  V-ATPase subunit C
  ------ inclusion threshold ------
      0.038   13.8   0.2      0.074   12.9   0.2    1.5  1  LemA        LemA family


Domain annotation for each model (and alignments):
>> V-ATPase_C  V-ATPase subunit C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  401.9   0.9  3.6e-124  3.2e-120       1     370 []       6     387 ..       6     387 .. 0.93

  Alignments for each domain:
  == domain 1  score: 401.9 bits;  conditional E-value: 3.6e-124
  V-ATPase_C   1 ywLisvpg...ektseqtleelnkalskkskn.selykfeipdlkvgtLDsLvalsddLgKldafvesvvkKvartlaevledqkdkleenllvngksl 95 
                 y+L+s+p+   +++s +++++++++++    +   ++ f+ip++k+gtLD Lv+++d+L+Kl+  + ++v+K++++l+++le +++k+++++ vn+k+ 
  KHJ35158.1   6 YILVSLPTsiaSNDSGEAFNTIRSTVAG---DnVATVPFKIPEFKTGTLDILVRQADELAKLEGNCAATVAKINDYLKSLLEGDEEKVSQQKKVNDKPA 101
                 89******66666666777777777764...4499**************************************************************** PP

  V-ATPase_C  96 esYltkFqWdeakypvkqslkelvdiiskevtqidedlktksaaYnelksslqalerkktgnLltrsLadlvkkedfvldseyLttllViVpknsekew 194
                 ++Yl++F W++ ky+++++l el++ ++ke+ +id+d+k+k+++Yn++k+sl++l +k+tgnL+t+sLa +v+++ +++dse+L+t+l++Vp + +k +
  KHJ35158.1 102 DQYLRSFCWNKIKYRTDKPLVELIESLRKELLSIDNDVKAKITQYNQIKTSLNTLVKKQTGNLSTKSLASIVNPSLLIKDSEHLETHLIAVPISDKKVF 200
                 *************************************************************************************************** PP

  V-ATPase_C 195 lksYekltdmVVPrSakklaeDneyaLftVtlfkkvveefkakarekkfivReFsydeeeleeekeeltkleaekkkqegelvrllkvnFsevfvawiH 293
                 l+sYe+l+ mVVPrS+ ++a+D+e+ LftVt fkk+  ef +k+re+k+++R ++      eee++e++++e++++k +ge +rl ++ +se++++wiH
  KHJ35158.1 201 LQSYETLSPMVVPRSTVEVAQDKEFSLFTVTTFKKYSMEFHNKCRESKWTPRPYKHVTGGKEEEQKEIDQIEKNERKVWGEALRLSRTGWSESVMIWIH 299
                 *************************************************************************************************** PP

  V-ATPase_C 294 lkalrvFvEsvLRYGlpvnFqalllqpekkkekklreeLnklfahldss....akkgkvkkdd.....sldiagl..slgqqeyfpYv 370
                   +lrvFvEsvLRYGlp +F++ ll++++k++kk++++L+++f++l+++    +k+gkv+kdd     ++++ag+    + +ey+ Yv
  KHJ35158.1 300 ALTLRVFVESVLRYGLPLDFVCALLKTNPKSAKKAKTALDSRFSYLGGNalvkDKSGKVTKDDsvlssEIAAAGVggFGEGNEYTAYV 387
                 *********************9999999*********************999888888888887774433333335233345677776 PP

>> LemA  LemA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.2   8.3e-06     0.074      19     126 ..      54     168 ..      48     186 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 8.3e-06
        LemA  19 LvetvkgyakhEketleevteaRaka......aeaesveekaeaenqlssalsrllavaEnYPdLka.nenfleLqeelegtEnriavaRrrYneavre 110
                 Lv+ +   ak E +  ++v+++   +      +e++  ++k+ +++  ++ l+++     +Y   k   e +++L +el +++n+++++ ++Yn+  ++
  KHJ35158.1  54 LVRQADELAKLEGNCAATVAKINDYLksllegDEEKVSQQKKVNDKPADQYLRSFCWNKIKYRTDKPlVELIESLRKELLSIDNDVKAKITQYNQIKTS 152
                 56666666777777777777666655666664334444444444555666777777777777766652466789************************* PP

        LemA 111 yntkiesfpsnivakl 126
                 +nt +++  +n+  k 
  KHJ35158.1 153 LNTLVKKQTGNLSTKS 168
                 ******9999987765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       999  (0.0557198); expected 358.6 (0.02)
Passed bias filter:                      558  (0.0311228); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2874.31
//
Query:       KHJ35159.1  [L=994]
Description: putative nuclear pore complex protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.9e-176  588.3  12.7   2.7e-176  587.8  12.7    1.2  1  Nup84_Nup100  Nuclear pore protein 84 / 107
  ------ inclusion threshold ------
        0.7   10.3   3.4         19    5.8   0.1    3.2  3  ACP_PD        Acyl carrier protein phosphodiesterase


Domain annotation for each model (and alignments):
>> Nup84_Nup100  Nuclear pore protein 84 / 107
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  587.8  12.7    3e-180  2.7e-176       2     730 .]     188     960 ..     187     960 .. 0.89

  Alignments for each domain:
  == domain 1  score: 587.8 bits;  conditional E-value: 3e-180
                   HHHHHHHHHHHHHHHHHHHHHSS-TTT......---SSTTS-HHHHHHHHHHH-HHHHHHHHHHHHHHHT-------SS--.S.............. CS
  Nup84_Nup100   2 enlelEaktWdLlerLysdrlssasekseeeeellelhpyssekelveellkkdselrelqivldWLeenakepeeeeged.del.e.....a.r.. 88 
                     +e+Ea+tWdLl+rL  +r        ++ ++++  h y s+kel++++l +++ + e+++vl+WL+++a    ee+ged d l e     a r  
    KHJ35159.1 188 DHWEQEAQTWDLLKRLATVRFG------TKLQDHKLNHFYVSKKELYDHFLATEELALERKTVLQWLKDTA----EESGEDiDVLvEdlqqnAeRgd 274
                   57*******************6......7788888889*********************************....6666666888855766654599 PP

                   ...STTHHHHHC.SSHS...............................HHSTTHHHHSGGGS-HHHHHHHHHHHHHHHHHHHTT-.HHHHHHHHHHT CS
  Nup84_Nup100  89 ..ahkwenTlesikqkkrlr...........gvaas.sskekeeqlVtelDpDaplRqgrkLdpkDeederallkaifellRaGk.leeaielCket 170
                     ah+w++T+ +ik +kr++           +v +   +++++e+l t+lDpDap+Rqgr+L+ +D+++era++ +++ellR+G+ l+++ e+C e+
    KHJ35159.1 275 iiAHGWLHTKAAIKDHKRRTasshaldpkaqNVEKVlLNTARTEPLTTQLDPDAPNRQGRRLATQDQYFERAIWLGCYELLRRGNsLSKISEWCMER 371
                   99***************999**********977777899999******************************************************* PP

                   T-HHHHHHHHTTSB-B-TTTSGGGTT-SS-BSBTTHHHHHHHHHHHHHTSSS-HHHHHHHHHHHTS---H.HHT-SHHHHHHHHHHHHHHHHHHHHH CS
  Nup84_Nup100 171 gqlwraaiLeGlklyhdpnideeldekeevegnksralWkrtcyklsknknldeyeraiyglLsGdlesvlkvcksWedhLwaylnalleeqveqel 267
                   +++wra++++G++  + ++             +     W+++c+++++  +++eye a+yg+L Gd++sv++vck+W+d++++++n++l++q++++l
    KHJ35159.1 372 TEIWRAVSMSGVSFEDSEED-------RNFASPDVMIRWRKICLSIAHTIGNSEYENAVYGILGGDISSVEPVCKTWDDFMFVHYNSILRTQFDNYL 461
                   ***********976655322.......45566666778*********************************************************** PP

                   HH................TTSS-GGG--S-------HHHHHHHHHHH.....SHHHHHSCCHHHHHHHHCS-HHHHHHHHHHTTHH--......... CS
  Nup84_Nup100 268 relvkkkse....seelpeeklsseelvlalpkpasseeilnllssl.snervreeaeeplriiqaaiIlddvdsllesladalskaa......... 350
                   ++++ + +e    +        ++ + +++ ++p+  ++  +l++ l +n+++ +e+++p++i+q+ +I+d+++ ++ +++ als++a         
    KHJ35159.1 462 KNIQLQITEtrpyV------PPKNTDSAQNFSEPQ--DSRQRLIAILmTNPKILKESKKPMKILQGVLIADQFSHFIFQQGLALSQIAnakevsrvi 550
                   **855554443332......333333445556667..6666666666677************************************99********* PP

                   ........---------TTSHHHHHHHHHHHHHHHHH...ST.TSS-HHHHHHHHHHHHHHHHHTT-GGGHHHHHTTGGGGGG-XXXXXXXXXXXXX CS
  Nup84_Nup100 351 ........kkdesenelleepdllRflaHlilflrllgksepeskeeeeakeniitaYislLreagkyeliplYvsfLpeeravevyskfLesitdk 439
                           + d +++ +++++d+lR+l+H+++++  lg +  ++  +e++ +n++ aYi++L++a k+eliplY+s+L+  r + ++s++L++i d+
    KHJ35159.1 551 ppskhqldDVDLTKYVTFDDHDSLRVLTHVLIIFMGLGLD-LGDVYRETEIQNVMVAYITFLKLAAKEELIPLYCSQLSGIRKYSILSRNLIDIIDE 646
                   ********9999***************************5.78999999999********************************************* PP

                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..............XXXXX..................XXXXXXXXXXXXXXXXXX.XX CS
  Nup84_Nup100 440 eeRekqLklakklgldveailkrtvervieeteseyeps..............eeidiekee.........elsedesevteeDlklirsleWllfe 513
                   +++  qLkl++klgldv++++  ++  ++++ + +  ++              e       +         ++ +++ +  ++Dl lirsl+W+l++
    KHJ35159.1 647 DQQIVQLKLMRKLGLDVQEFVSLQARYLLDDFPDSS-RDflalgnlklfsdnyE-------SsslfrtlkkDFISEKYSAGRIDLLLIRSLKWYLLV 735
                   *************************99999999933.33688888777665551.......1344455556667777799***************** PP

                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.............XXXXX............XXXXXXXXXXXXXXXXXXXXXX CS
  Nup84_Nup100 514 delyeealeqsnalirrFLlngklaaakelfkrlnpkdlikeydl........eeledelees............kdeleeeteeaareyleyeali 590
                   d+l+ e +  +++l+ rF+++++l+aak+l+ +++ k l++++++                              + +l++   ++ar+++e+e li
    KHJ35159.1 736 DGLWVESFRLGTLLYLRFFKHMNLHAAKMLSINVPSKVLMERKTRailgeslnL--------FnsnidfineessTGALKAYLLNEARNFRELEILI 824
                   **********************************55555555666444444440........3555666666688999******************* PP

                   XXXXXXXXXXXXXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXX.X...XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Nup84_Nup100 591 ealdaleewkkllsnskpkkkkqyeseklkewkqklkelvkqakeliknvLkfgWLvdltekeeeeerkeeleelRqlyiPelileLhsvlvsartl 687
                   e+ld++++ + l++ +k+   +q+ +  l+ew +++++++++ +++ + ++k gWL+++ +    e+ k++le++Rq+y+Pe+ ++++++l+ a+ +
    KHJ35159.1 825 ECLDSIDTANCLVEIKKQGLSNQKPPILLREWRSDYQTACEESHSCARLLMK-GWLLKSPN----ESIKNDLEHIRQAYLPEILIAYITTLQVAGLY 916
                   ***************9999999999999********************7777.********....68899*************************** PP

                   XX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  Nup84_Nup100 688 ls.enlkealeLanvVAdeesklyevFsksgrlkellqklaesS 730
                   l+ ++l ea+e++++ Ade+s+++e+F ++grl e+++ la +S
    KHJ35159.1 917 LNqDFLLEAMEVSSILADEDSDVLETFIRTGRLHEMVDNLARAS 960
                   *****************************************998 PP

>> ACP_PD  Acyl carrier protein phosphodiesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1      0.41   3.7e+03      57      87 ..      90     121 ..      89     129 .. 0.80
   2 ?    3.7   0.1     0.009        81       1      54 [.     228     283 ..     228     311 .. 0.88
   3 ?    5.8   0.1    0.0021        19       1      41 [.     441     481 ..     441     489 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.41
      ACP_PD  57 elegieralqrma.rrlkrasklaeaieelee 87 
                 e+e  +++l+r + +r++ +++ +e++ el +
  KHJ35159.1  90 EVEQFAQILDRFNpQRITDKTERQEMMFELID 121
                 67888999999999999999988888877765 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.009
      ACP_PD   1 yDhfLarnwseysaepLeefvqrvyaqlekneealPerlqrllpr..mieedwLes 54 
                 yDhfLa++   ++ ++  ++++++ ++  ++ + l e+lq+ ++r  +i++ wL+ 
  KHJ35159.1 228 YDHFLATEELALERKTVLQWLKDTAEESGEDIDVLVEDLQQNAERgdIIAHGWLHT 283
                 9*******999999999999999999999999999999999988655999999975 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0021
      ACP_PD   1 yDhfLarnwseysaepLeefvqrvyaqlekneealPerlqr 41 
                 +D f+  +++    +++++++++++ q++++++++P++   
  KHJ35159.1 441 WDDFMFVHYNSILRTQFDNYLKNIQLQITETRPYVPPKNTD 481
                 99**********************************98665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (994 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.28s 00:00:01.00 Elapsed: 00:00:00.44
# Mc/sec: 6748.32
//
Query:       KHJ35160.1  [L=925]
Description: putative pre-mrna-splicing factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-53  179.7   6.2    1.1e-52  178.4   6.2    1.7  1  PRP1_N    PRP1 splicing factor, N-terminal
    2.1e-30  102.8  25.3    0.00018   22.0   0.1   13.7 13  TPR_14    Tetratricopeptide repeat
    1.2e-24   86.6  17.3    3.2e-07   30.7   0.7   10.0 10  TPR_19    Tetratricopeptide repeat
    5.7e-13   47.9  10.2        0.6   10.4   0.0    9.9 10  TPR_2     Tetratricopeptide repeat
    2.5e-10   40.8  12.2    0.00055   20.5   0.0    7.0  7  TPR_16    Tetratricopeptide repeat
    1.1e-08   34.6   1.2       0.99    9.8   0.0    7.5  7  TPR_8     Tetratricopeptide repeat
    2.4e-08   33.8   9.3         13    6.5   0.0    9.9 12  TPR_17    Tetratricopeptide repeat
      5e-08   32.3  10.6    0.00039   19.5   0.0    5.9  7  NARP1     NMDA receptor-regulated protein 1
    2.2e-07   30.4  26.1    1.8e-05   24.1   7.9    5.4  6  TPR_15    Tetratricopeptide repeat
    9.2e-07   28.4   0.0        1.6    8.6   0.0    5.0  4  TPR_1     Tetratricopeptide repeat
    1.9e-06   27.9   3.2      0.018   15.2   0.0    5.8  6  TPR_9     Tetratricopeptide repeat
    2.5e-06   27.0   3.3       0.82    9.4   0.1    6.2  6  TPR_11    TPR repeat
     0.0036   16.1   2.4        1.7    7.3   0.0    3.8  4  DUF3808   Protein of unknown function (DUF3808)
      0.006   17.1  10.6         29    5.6   0.1    8.1  7  TPR_6     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.015   15.2   1.9        3.6    7.5   0.1    3.5  3  Wzy_C_2   Virulence factor membrane-bound polymerase, C-termi
      0.017   14.8  18.9      0.074   12.8   3.1    4.9  6  TPR_21    Tetratricopeptide repeat-like domain
       0.71    9.8   2.7         59    3.5   0.0    3.8  4  Suf       Suppressor of forked protein (Suf)
       0.73   10.0   5.3          5    7.3   0.9    2.9  2  CREPT     Cell-cycle alteration and expression-elevated prote
        4.1    7.8  15.6        6.1    7.2   0.0    6.6  7  TPR_12    Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> PRP1_N  PRP1 splicing factor, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.4   6.2   1.2e-55   1.1e-52       1     148 []      12     169 ..      12     169 .. 0.94

  Alignments for each domain:
  == domain 1  score: 178.4 bits;  conditional E-value: 1.2e-55
                 ---S--HHHHHT------.............................................------------------------------------ CS
      PRP1_N   1 aPagYvaGlGRGAtGfttrsdigpareaeaseee.................kkkkkeeeeeeeedeedlqdeendefegeseglfakaeydedDeeAdr 82 
                 aP++YvaGlGRGAtGfttrsd+gpare  +se++                 ++ +  e++++++d+e++qd+en+       glfa++ yd+dD+eAdr
  KHJ35160.1  12 APENYVAGLGRGATGFTTRSDLGPAREG-PSEDQikealakraaqlgaaapTAYGVPEKKDDDDDDERFQDPENEV------GLFAGGAYDKDDDEADR 103
                 8**************************5.55566799*********999986677778889999999999999988......***************** PP

                 ---HHHHHHHHHHHHHHTT-------......-HHHHHHHHHHHHHTT--HHHHHS----B-SS-H CS
      PRP1_N  83 iyeeiderlderrkkrreakekeelekvreekpkiqeqFadlkrkLaevseeeWeniPevgdltrk 148
                 iy+e+de++d+rrk+rrea+ k+ele++++++pkiq+qFadlkr+L +vs+e+W+n+Pevgdlt k
  KHJ35160.1 104 IYQEVDEKMDKRRKARREARLKTELEEYERNNPKIQQQFADLKRALGTVSDEDWANLPEVGDLTGK 169
                 ***************************************************************987 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.0    0.0087       8.2      12      44 .]     271     303 ..     268     303 .. 0.91
   2 !   11.4   0.0    0.0005      0.48       4      40 ..     297     333 ..     295     337 .. 0.94
   3 !    8.2   0.3    0.0055       5.2      15      42 ..     400     427 ..     386     429 .. 0.90
   4 ?    7.3   0.3      0.01       9.7      10      44 .]     425     459 ..     421     459 .. 0.88
   5 ?    5.1   0.8     0.053        50       4      44 .]     529     569 ..     527     569 .. 0.88
   6 !   19.5   0.2   1.3e-06    0.0012       2      43 ..     561     602 ..     560     603 .. 0.96
   7 !   22.0   0.1   1.9e-07   0.00018       3      43 ..     596     636 ..     596     637 .. 0.95
   8 !   12.4   0.7   0.00024      0.23       3      36 ..     630     663 ..     629     666 .. 0.91
   9 !   18.6   0.0   2.4e-06    0.0023       3      43 ..     663     703 ..     661     704 .. 0.91
  10 !   16.7   0.0     1e-05    0.0095       1      44 []     695     738 ..     695     738 .. 0.95
  11 !   12.1   0.1    0.0003      0.28       3      40 ..     731     768 ..     729     772 .. 0.86
  12 ?    2.4   0.0       0.4   3.8e+02       1      31 [.     763     793 ..     763     806 .. 0.87
  13 ?    3.0   0.0      0.26   2.4e+02       6      40 ..     833     869 ..     828     874 .. 0.76

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0087
      TPR_14  12 lalGdpdeAiallrralalaPddaeawlllaql 44 
                 ++ Gd ++ + ll+ +++++P++a  w++ a+l
  KHJ35160.1 271 AQVGDVKRVRVLLESVIRTNPKHAPGWIAAARL 303
                 567999999********************9996 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.0005
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawll 40 
                 + a+a++++ +G+  +A+++  r ++ +P+++++wl+
  KHJ35160.1 297 WIAAARLEELAGKIVAARNVIARGCEFCPKNEDVWLE 333
                 8899*******************************86 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.0055
      TPR_14  15 GdpdeAiallrralalaPddaeawllla 42 
                 ++pd+A+ ll +a +  P + e+wl+la
  KHJ35160.1 400 ENPDDARLLLAKATEIIPLSVELWLALA 427
                 69*************************9 PP

  == domain 4  score: 7.3 bits;  conditional E-value: 0.01
      TPR_14  10 allalGdpdeAiallrralalaPddaeawlllaql 44 
                 al++l+  + A ++l++a ++ P++ e+w++ a+l
  KHJ35160.1 425 ALAHLETSENAQKVLNKARKAIPTSHEIWIAAARL 459
                 466788889999********************996 PP

  == domain 5  score: 5.1 bits;  conditional E-value: 0.053
      TPR_14   4 llalaeallalGdpdeAiallrralalaPddaeawlllaql 44 
                 +++ a+a  ++G++ +A+a++  al+ + +++ +wl+ a+l
  KHJ35160.1 529 WMEDAKASIHRGQYGTARAIYAYALQVFVNSRKLWLAAADL 569
                 5555788899**************************99976 PP

  == domain 6  score: 19.5 bits;  conditional E-value: 1.3e-06
      TPR_14   2 eallalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 +++la+a+++ + G+ ++  +ll++ ++++P+++++w++la+
  KHJ35160.1 561 KLWLAAADLEKNHGQKEALWKLLEKSVEACPQSEVLWMMLAK 602
                 68**************************************96 PP

  == domain 7  score: 22.0 bits;  conditional E-value: 1.9e-07
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 ++++la+  +++G+ d A+++l ra  ++P+++++wl+ ++
  KHJ35160.1 596 LWMMLAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVK 636
                 69***********************************9876 PP

  == domain 8  score: 12.4 bits;  conditional E-value: 0.00024
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddae 36 
                  +la++++++++++ ++A++ll+ a + aP+d++
  KHJ35160.1 630 IWLAAVKLEAENQQSEQARELLKTARQEAPTDRV 663
                 69****************************9865 PP

  == domain 9  score: 18.6 bits;  conditional E-value: 2.4e-06
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawlllaq 43 
                 ++++ ++++++lG++++A++l ++al+l+P+ + +w+  +q
  KHJ35160.1 663 VWMKSVAFERQLGNTEGALDLVNQALQLFPNVPKLWMIKGQ 703
                 688889999***************************98777 PP

  == domain 10  score: 16.7 bits;  conditional E-value: 1e-05
      TPR_14   1 peallalaeallalGdpdeAiallrralalaPddaeawlllaql 44 
                 p++++  +++++  G++ +A++++    +++P++  +wll+ +l
  KHJ35160.1 695 PKLWMIKGQIYEGEGNLPRAREAYSMGTKACPESVPLWLLYSRL 738
                 6789999**********************************986 PP

  == domain 11  score: 12.1 bits;  conditional E-value: 0.0003
      TPR_14   3 allalaeallalGdpdeAiallrralalaPddaeawll 40 
                 ++l++ ++++++G++ +A+ +l+ra  +  +++e+w++
  KHJ35160.1 731 LWLLYSRLEERAGNLVKARGVLDRARLAIVNSPELWTE 768
                 8************************6666888888876 PP

  == domain 12  score: 2.4 bits;  conditional E-value: 0.4
      TPR_14   1 peallalaeallalGdpdeAiallrralala 31 
                 pe++ +  ++++++ +  +A +l  +al++ 
  KHJ35160.1 763 PELWTESIRVERRANNIGQAKNLMAQALQQV 793
                 688889999*******************985 PP

  == domain 13  score: 3.0 bits;  conditional E-value: 0.26
      TPR_14   6 alaeallalGdpdeAiallrralala..Pddaeawll 40 
                  +a++++  +++++A + +++a+ l+   +d +aw++
  KHJ35160.1 833 TIARIFWGERKLEKAQNWFEKAIILDsdLGDTWAWYY 869
                 67999****************9766511466666655 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0     0.016        15       5      50 ..     274     319 ..     271     331 .. 0.91
   2 ?    3.3   0.1      0.13   1.2e+02       4      33 ..     399     428 ..     398     433 .. 0.83
   3 !    9.0   0.1    0.0021         2       8      42 ..     433     467 ..     430     472 .. 0.93
   4 !   10.9   0.4   0.00053       0.5       4      43 ..     539     578 ..     536     603 .. 0.79
   5 !    9.4   0.0    0.0016       1.5      12      50 ..     581     619 ..     577     620 .. 0.94
   6 !   30.7   0.7   3.4e-10   3.2e-07       3      62 ..     606     664 ..     604     668 .. 0.94
   7 !   11.8   0.0   0.00028      0.26       4      48 ..     674     718 ..     671     724 .. 0.92
   8 !   15.7   0.0   1.7e-05     0.016       4      62 ..     708     766 ..     705     768 .. 0.92
   9 ?    2.1   0.1       0.3   2.9e+02      32      57 ..     770     795 ..     761     806 .. 0.66
  10 ?    3.1   0.0      0.15   1.4e+02       3      43 ..     840     880 ..     838     911 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.016
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAealLda 50 
                 gd  +   lle+++  +pk+a  +++ A++   +g + +A++++++
  KHJ35160.1 274 GDVKRVRVLLESVIRTNPKHAPGWIAAARLEELAGKIVAARNVIAR 319
                 666777789********************************99886 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.13
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAe 33 
                 e+++++A  ll++a +  p + e++l+LA 
  KHJ35160.1 399 EENPDDARLLLAKATEIIPLSVELWLALAH 428
                 578899999999999999999999998886 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.0021
      TPR_19   8 aeAlalleqalqedpknaearllLAeallalgqld 42 
                 ++A++ l +a ++ p + e++++ A+++ ++g+ +
  KHJ35160.1 433 ENAQKVLNKARKAIPTSHEIWIAAARLQEQMGNAN 467
                 68******************************976 PP

  == domain 4  score: 10.9 bits;  conditional E-value: 0.00053
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqlde 43 
                 +g+y  A a++++alq   ++  ++l+ A++  + gq ++
  KHJ35160.1 539 RGQYGTARAIYAYALQVFVNSRKLWLAAADLEKNHGQKEA 578
                 8******************************999999886 PP

  == domain 5  score: 9.4 bits;  conditional E-value: 0.0016
      TPR_19  12 alleqalqedpknaearllLAeallalgqldeAealLda 50 
                 +lle+  ++ p+++ +++ LA+  +++g++d A+++L +
  KHJ35160.1 581 KLLEKSVEACPQSEVLWMMLAKEKWQAGEIDNARRVLGR 619
                 6899*9******************************976 PP

  == domain 6  score: 30.7 bits;  conditional E-value: 3.4e-10
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddarya 62 
                 ++g  ++A + l +a+ ++p+n++++l+ +++  ++ q ++A++lL+++ +e+p   r++
  KHJ35160.1 606 QAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEAENQQSEQARELLKTARQEAPT-DRVW 664
                 89****************************************************9.5555 PP

  == domain 7  score: 11.8 bits;  conditional E-value: 0.00028
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealL 48 
                  g+ + Al+l  qalq  p+ + +++   +++   g+l  A+++ 
  KHJ35160.1 674 LGNTEGALDLVNQALQLFPNVPKLWMIKGQIYEGEGNLPRAREAY 718
                 58999*************************************976 PP

  == domain 8  score: 15.7 bits;  conditional E-value: 1.7e-05
      TPR_19   4 egdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpddarya 62 
                 eg++ +A ++++   ++ p++  ++ll+ ++   +g+l +A+ +Ld++ ++  ++++++
  KHJ35160.1 708 EGNLPRAREAYSMGTKACPESVPLWLLYSRLEERAGNLVKARGVLDRARLAIVNSPELW 766
                 79999999999999999********************************9999988776 PP

  == domain 9  score: 2.1 bits;  conditional E-value: 0.3
      TPR_19  32 AeallalgqldeAealLdalpeedpd 57 
                 +++   ++++ +A++l+++++++  +
  KHJ35160.1 770 IRVERRANNIGQAKNLMAQALQQVTN 795
                 55666677777777777777766555 PP

  == domain 10  score: 3.1 bits;  conditional E-value: 0.15
      TPR_19   3 aegdyaeAlalleqalqedpknaearllLAeallalgqlde 43 
                  e +++ A++ +e+a+  d + ++ ++++ + ll+ g  ++
  KHJ35160.1 840 GERKLEKAQNWFEKAIILDSDLGDTWAWYYKFLLQHGTEEK 880
                 68899****************99999999999999886655 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       3.8   3.6e+03       3      34 .]     296     327 ..     294     327 .. 0.88
   2 ?   -0.8   0.0       2.4   2.3e+03      15      32 ..     400     417 ..     398     418 .. 0.87
   3 ?    0.6   0.1      0.87   8.2e+02       9      29 ..     534     554 ..     529     558 .. 0.88
   4 !    7.4   0.0    0.0056       5.3       3      34 .]     596     627 ..     595     627 .. 0.95
   5 ?    2.8   0.3      0.17   1.6e+02      13      34 .]     640     661 ..     636     661 .. 0.88
   6 !   10.4   0.0   0.00063       0.6      12      33 ..     672     693 ..     671     694 .. 0.94
   7 !   10.0   0.0   0.00082      0.78       1      32 [.     695     726 ..     695     728 .. 0.85
   8 ?   -0.4   0.0       1.8   1.7e+03       4      27 ..     732     755 ..     730     757 .. 0.84
   9 ?   -0.7   0.0       2.1     2e+03      12      29 ..     774     791 ..     771     795 .. 0.86
  10 !    9.9   0.0   0.00087      0.82       6      32 ..     833     859 ..     828     861 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 3.8
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 ++ + +++ + +g+   A++   +  e +P+n
  KHJ35160.1 296 GWIAAARLEELAGKIVAARNVIARGCEFCPKN 327
                 788999999999********999999999987 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 2.4
       TPR_2  15 gdyeeAleafekAleldP 32 
                  ++++A+ ++ kA e+ P
  KHJ35160.1 400 ENPDDARLLLAKATEIIP 417
                 5899*********99876 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.87
       TPR_2   9 layyklgdyeeAleafekAle 29 
                 +a +++g+y  A++ +  Al+
  KHJ35160.1 534 KASIHRGQYGTARAIYAYALQ 554
                 677899**********99998 PP

  == domain 4  score: 7.4 bits;  conditional E-value: 0.0056
       TPR_2   3 alynlGlayyklgdyeeAleafekAleldPnn 34 
                 ++++l++  +++g+ + A++ + +A   +Pnn
  KHJ35160.1 596 LWMMLAKEKWQAGEIDNARRVLGRAFNQNPNN 627
                 589999999*********************98 PP

  == domain 5  score: 2.8 bits;  conditional E-value: 0.17
       TPR_2  13 klgdyeeAleafekAleldPnn 34 
                 ++++ e+A+e+++ A + +P++
  KHJ35160.1 640 ENQQSEQARELLKTARQEAPTD 661
                 567889**************96 PP

  == domain 6  score: 10.4 bits;  conditional E-value: 0.00063
       TPR_2  12 yklgdyeeAleafekAleldPn 33 
                 ++lg+ e Al++ ++Al+l Pn
  KHJ35160.1 672 RQLGNTEGALDLVNQALQLFPN 693
                 589******************8 PP

  == domain 7  score: 10.0 bits;  conditional E-value: 0.00082
       TPR_2   1 aealynlGlayyklgdyeeAleafekAleldP 32 
                 +++++  G++y+  g++ +A+ea+    + +P
  KHJ35160.1 695 PKLWMIKGQIYEGEGNLPRAREAYSMGTKACP 726
                 578999******************86666666 PP

  == domain 8  score: -0.4 bits;  conditional E-value: 1.8
       TPR_2   4 lynlGlayyklgdyeeAleafekA 27 
                 +    ++ +++g++ +A+  +++A
  KHJ35160.1 732 WLLYSRLEERAGNLVKARGVLDRA 755
                 6667778899********999998 PP

  == domain 9  score: -0.7 bits;  conditional E-value: 2.1
       TPR_2  12 yklgdyeeAleafekAle 29 
                 +++++  +A++++ +Al+
  KHJ35160.1 774 RRANNIGQAKNLMAQALQ 791
                 6789999*********98 PP

  == domain 10  score: 9.9 bits;  conditional E-value: 0.00087
       TPR_2   6 nlGlayyklgdyeeAleafekAleldP 32 
                  ++++ +   ++e+A ++fekA+ ld 
  KHJ35160.1 833 TIARIFWGERKLEKAQNWFEKAIILDS 859
                 6789999999*************9996 PP

>> TPR_16  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       4.8   4.5e+03      12      41 ..     401     427 ..     399     436 .. 0.71
   2 ?    1.3   0.2      0.58   5.5e+02      35      61 ..     527     553 ..     517     594 .. 0.59
   3 !   15.0   0.4     3e-05     0.029       2      67 ..     599     661 ..     598     662 .. 0.96
   4 !   20.5   0.0   5.8e-07   0.00055       9      60 ..     673     721 ..     671     729 .. 0.90
   5 ?    3.6   0.1      0.11   1.1e+02      31      60 ..     726     755 ..     722     763 .. 0.87
   6 ?   -2.3   0.0       7.8   7.3e+03       7      26 ..     773     792 ..     770     807 .. 0.84
   7 ?    1.8   0.0       0.4   3.8e+02       3      38 ..     834     869 ..     832     877 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 4.8
      TPR_16  12 dyddAaaaleaalkrdpssPdaaeAllllg 41 
                 ++ddA+ +l  a++     P+ +e +l+l+
  KHJ35160.1 401 NPDDARLLLAKATEII---PLSVELWLALA 427
                 6777777777777777...77777766665 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.58
      TPR_16  35 eAllllgdaalrqgrlaeAaalyraal 61 
                 e +++ + a  ++g +  A+a y+ al
  KHJ35160.1 527 EIWMEDAKASIHRGQYGTARAIYAYAL 553
                 555555555555666666655555444 PP

  == domain 3  score: 15.0 bits;  conditional E-value: 3e-05
      TPR_16   2 alaraalragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraalraapda 67 
                 +la++ ++ag+ d A+++l +a  ++   P + + +l+   + ++++  + A++l++ a ++ap +
  KHJ35160.1 599 MLAKEKWQAGEIDNARRVLGRAFNQN---PNNEDIWLAAVKLEAENQQSEQARELLKTARQEAPTD 661
                 89************************...99999****************************9976 PP

  == domain 4  score: 20.5 bits;  conditional E-value: 5.8e-07
      TPR_16   9 ragdyddAaaaleaalkrdpssPdaaeAllllgdaalrqgrlaeAaalyraa 60 
                 ++g+ + A+ + ++al ++   P  +  ++ +g+++   g+l++A+++y   
  KHJ35160.1 673 QLGNTEGALDLVNQALQLF---PNVPKLWMIKGQIYEGEGNLPRAREAYSMG 721
                 89*****************...************************999765 PP

  == domain 5  score: 3.6 bits;  conditional E-value: 0.11
      TPR_16  31 PdaaeAllllgdaalrqgrlaeAaalyraa 60 
                 P+ +  +ll+ ++  r+g+l +A+ ++++a
  KHJ35160.1 726 PESVPLWLLYSRLEERAGNLVKARGVLDRA 755
                 7778889*****************999998 PP

  == domain 6  score: -2.3 bits;  conditional E-value: 7.8
      TPR_16   7 alragdyddAaaaleaalkr 26 
                  +ra++  +A ++  +al +
  KHJ35160.1 773 ERRANNIGQAKNLMAQALQQ 792
                 67899999999999999865 PP

  == domain 7  score: 1.8 bits;  conditional E-value: 0.4
      TPR_16   3 laraalragdyddAaaaleaalkrdpssPdaaeAll 38 
                  ar+++  ++ ++A++ +e a+ +d++  d++++++
  KHJ35160.1 834 IARIFWGERKLEKAQNWFEKAIILDSDLGDTWAWYY 869
                 5999*********************77777777776 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0       1.7   1.6e+03      13      27 ..     428     442 ..     424     448 .. 0.80
   2 ?   -0.6   0.0       2.2   2.1e+03       2      18 ..     451     467 ..     450     468 .. 0.88
   3 ?   -1.7   0.1       4.9   4.6e+03       3      33 ..     562     592 ..     561     593 .. 0.79
   4 ?    6.2   0.0     0.014        14       3      34 .]     596     627 ..     595     627 .. 0.94
   5 ?    1.5   0.0      0.47   4.4e+02      12      33 ..     672     693 ..     662     694 .. 0.86
   6 ?    5.9   0.0     0.018        17       2      24 ..     696     718 ..     695     727 .. 0.89
   7 !    9.8   0.0     0.001      0.99       5      31 ..     832     858 ..     830     860 .. 0.88

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 1.7
                 HTT-HHHHHHHHHHH CS
       TPR_8  13 klgdyeeAkeyyeka 27 
                  l+  e+A+++++ka
  KHJ35160.1 428 HLETSENAQKVLNKA 442
                 577789********9 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 2.2
                 CHHHHHHHHHHHTT-HH CS
       TPR_8   2 eayynlgsiylklgdye 18 
                 e++   +++ +++g+ +
  KHJ35160.1 451 EIWIAAARLQEQMGNAN 467
                 799***********976 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 4.9
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpd 33 
                 +++  +++ ++ g++e+  + +ek +e+ p+
  KHJ35160.1 562 LWLAAADLEKNHGQKEALWKLLEKSVEACPQ 592
                 6788888888888888888889999998886 PP

  == domain 4  score: 6.2 bits;  conditional E-value: 0.014
                 HHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH. CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyyekaleldpdn 34 
                 ++++l++  ++ g++++A  ++ +a   +p+n
  KHJ35160.1 596 LWMMLAKEKWQAGEIDNARRVLGRAFNQNPNN 627
                 69***********************9999986 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 0.47
                 HHTT-HHHHHHHHHHHHHHHHH CS
       TPR_8  12 lklgdyeeAkeyyekaleldpd 33 
                 ++lg+ e A    ++al+l p+
  KHJ35160.1 672 RQLGNTEGALDLVNQALQLFPN 693
                 79****************9886 PP

  == domain 6  score: 5.9 bits;  conditional E-value: 0.018
                 CHHHHHHHHHHHTT-HHHHHHHH CS
       TPR_8   2 eayynlgsiylklgdyeeAkeyy 24 
                 ++++ +g+iy+  g++  A e+y
  KHJ35160.1 696 KLWMIKGQIYEGEGNLPRAREAY 718
                 689*************9999998 PP

  == domain 7  score: 9.8 bits;  conditional E-value: 0.001
                 HHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyyekaleld 31 
                 + +++i +   ++e+A+ ++eka+ ld
  KHJ35160.1 832 VTIARIFWGERKLEKAQNWFEKAIILD 858
                 5799*******************9665 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4   0.0     0.063        60       3      33 ..     284     314 ..     282     315 .. 0.88
   2 ?   -1.7   0.0       5.6   5.3e+03       6      17 ..     321     332 ..     318     333 .. 0.83
   3 ?   -0.5   0.0       2.2   2.1e+03       6      20 ..     398     412 ..     398     413 .. 0.86
   4 ?    2.5   0.0      0.25   2.4e+02       3      24 ..     410     431 ..     408     446 .. 0.77
   5 ?   -1.4   0.0       4.3     4e+03      23      34 .]     536     547 ..     533     547 .. 0.77
   6 ?    2.8   0.0      0.19   1.8e+02       1      21 [.     582     602 ..     582     602 .. 0.93
   7 ?    5.5   0.2     0.028        27       7      34 .]     622     649 ..     618     649 .. 0.92
   8 ?    5.2   0.0     0.035        33       4      34 .]     686     716 ..     683     716 .. 0.94
   9 ?    6.5   0.0     0.013        13       7      33 ..     723     749 ..     718     750 .. 0.93
  10 ?   -0.6   0.0       2.5   2.3e+03       2      16 ..     851     865 ..     847     875 .. 0.67
  11 ?   -2.0   0.0       6.7   6.3e+03       4      18 ..     887     901 ..     886     904 .. 0.86
  12 ?   -2.2   0.0       7.8   7.4e+03       4      13 ..     900     909 ..     899     911 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.063
      TPR_17   3 lkaleldPnnadaynnLAelllknGdlmtAr 33 
                 + +++ +P++a+ +   A+l + +G+   Ar
  KHJ35160.1 284 ESVIRTNPKHAPGWIAAARLEELAGKIVAAR 314
                 668999******************9988886 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 5.6
      TPR_17   6 leldPnnadayn 17 
                  e +P+n d++ 
  KHJ35160.1 321 CEFCPKNEDVWL 332
                 689******996 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 2.2
      TPR_17   6 leldPnnadaynnLA 20 
                 le +P++a ++  +A
  KHJ35160.1 398 LEENPDDARLLLAKA 412
                 799*****9998887 PP

  == domain 4  score: 2.5 bits;  conditional E-value: 0.25
      TPR_17   3 lkaleldPnnadaynnLAelll 24 
                  ka e+ P +++++  LA l  
  KHJ35160.1 410 AKATEIIPLSVELWLALAHLET 431
                 6899999***********9974 PP

  == domain 5  score: -1.4 bits;  conditional E-value: 4.3
      TPR_17  23 llknGdlmtArq 34 
                   ++G+++tAr+
  KHJ35160.1 536 SIHRGQYGTARA 547
                 5689******95 PP

  == domain 6  score: 2.8 bits;  conditional E-value: 0.19
      TPR_17   1 lylkaleldPnnadaynnLAe 21 
                 l++k++e +P + +++ +LA+
  KHJ35160.1 582 LLEKSVEACPQSEVLWMMLAK 602
                 689****************95 PP

  == domain 7  score: 5.5 bits;  conditional E-value: 0.028
      TPR_17   7 eldPnnadaynnLAelllknGdlmtArq 34 
                  ++Pnn d +    +l ++n ++++Ar+
  KHJ35160.1 622 NQNPNNEDIWLAAVKLEAENQQSEQARE 649
                 68************************96 PP

  == domain 8  score: 5.2 bits;  conditional E-value: 0.035
      TPR_17   4 kaleldPnnadaynnLAelllknGdlmtArq 34 
                 +al+l Pn ++++  ++++++  G+l +Ar+
  KHJ35160.1 686 QALQLFPNVPKLWMIKGQIYEGEGNLPRARE 716
                 89************************99996 PP

  == domain 9  score: 6.5 bits;  conditional E-value: 0.013
      TPR_17   7 eldPnnadaynnLAelllknGdlmtAr 33 
                 + +P +++++ ++ +l +++G+l +Ar
  KHJ35160.1 723 KACPESVPLWLLYSRLEERAGNLVKAR 749
                 679*********************998 PP

  == domain 10  score: -0.6 bits;  conditional E-value: 2.5
      TPR_17   2 ylkaleldPnnaday 16 
                 ++ka+ ld +  d +
  KHJ35160.1 851 FEKAIILDSDLGDTW 865
                 567777776664444 PP

  == domain 11  score: -2.0 bits;  conditional E-value: 6.7
      TPR_17   4 kaleldPnnadaynn 18 
                 k++ ++P + ++++ 
  KHJ35160.1 887 KFILNEPRHGEVWQS 901
                 7899*********85 PP

  == domain 12  score: -2.2 bits;  conditional E-value: 7.8
      TPR_17   4 kaleldPnna 13 
                 +++++dP+na
  KHJ35160.1 900 QSVAKDPKNA 909
                 57899****9 PP

>> NARP1  NMDA receptor-regulated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   3.0       2.9   2.7e+03     408     441 ..     109     141 ..      92     176 .. 0.52
   2 ?   -3.5   0.0       3.7   3.5e+03     206     250 ..     274     318 ..     271     322 .. 0.85
   3 !    7.5   0.1    0.0017       1.6     203     251 ..     427     474 ..     371     482 .. 0.86
   4 ?    2.6   0.2     0.054        51      18     102 ..     573     657 ..     558     666 .. 0.54
   5 !   19.5   0.0   4.1e-07   0.00039     181     248 ..     652     717 ..     627     724 .. 0.74
   6 ?    3.8   0.0     0.023        22     222     306 ..     725     807 ..     721     824 .. 0.80
   7 ?    2.4   0.0      0.06        57     205     289 ..     811     891 ..     764     898 .. 0.68

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 2.9
                 HHHHHHHHHHHHH.HHHHHHHHHHHHHHH--.... CS
       NARP1 408 aerkklrkkakka.ekkaekeeaekaekekekkaa 441
                 +e+   r+ka+++ + k e ee e+++ + ++  +
  KHJ35160.1 109 DEKMDKRRKARREaRLKTELEEYERNNPKIQQ--Q 141
                 22333344555553445555554444433332..2 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 3.7
                 T-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHH CS
       NARP1 206 gsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaevme 250
                 g++++   ++++ i+ +p+    +++ ar+ + aG + +A +v+ 
  KHJ35160.1 274 GDVKRVRVLLESVIRTNPKHAPGWIAAARLEELAGKIVAARNVIA 318
                 5566666788999*************************9999876 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.0017
                 HHHT-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHH CS
       NARP1 203 dklgsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaevmee 251
                  +l+  e+A ++++ka +  pt+ e++++ ar+ +++G+ +k ++vm++
  KHJ35160.1 427 AHLETSENAQKVLNKARKAIPTSHEIWIAAARLQEQMGNANK-VNVMKR 474
                 57888999*******************************998.456655 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.054
                 THHHHHHHHHHHHGGG---HHHHHH.HHHHHHHHTT-HHHHHHHHHHHHHH-TT-CHHHHHHHHHT..SSS-HHHHHHHHHHTTTS CS
       NARP1  18 gkleeAlehLeekekqivDklavke.tkaelllkLgrkeeAeatyeaLlernpenskYyeglekakklskedeeallalydelaek 102
                    +eAl +L ek+ + + + +v+  + a+   + g+ ++A++++ +  ++np+n++ + +  k +  +++++e+  +l++++ ++
  KHJ35160.1 573 HGQKEALWKLLEKSVEACPQSEVLWmMLAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEA-ENQQSEQARELLKTARQE 657
                 3345555555555555555555543034666666666666666666666666666666555544443.333344444555444444 PP

  == domain 5  score: 19.5 bits;  conditional E-value: 4.1e-07
                 GSS----SSHHHHHHHHHHHHHHHHT-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHH CS
       NARP1 181 edsekepesallwvlyflAqhydklgsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaev 248
                 +++++e ++  +w+      +  +lg++e Al+++++a++  p++  l+++K++i++  G+l +A e+
  KHJ35160.1 652 KTARQEAPTDRVWMKSV--AFERQLGNTEGALDLVNQALQLFPNVPKLWMIKGQIYEGEGNLPRAREA 717
                 44455666666676654..35668999************************************99876 PP

  == domain 6  score: 3.8 bits;  conditional E-value: 0.023
                 -TT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHCTTT-HHHHHHHHHHHHHTT-HHHHHHHHTTTS-TTSHHHHHHHHTT-HHHH CS
       NARP1 222 tptlvelyltKarilkhaGdlkkAaevmeearklDlaDRyiNskcakymLradeveeAeetvslFtreevdaledlnemqcmWfe 306
                  p++v l+l  +r+ ++aG+l kA  v+++ar    +   + ++  +   ra+++ +A+++++   ++   + + l   +++W++
  KHJ35160.1 725 CPESVPLWLLYSRLEERAGNLVKARGVLDRARLAIVNSPELWTESIRVERRANNIGQAKNLMAQALQQV--TNSGLLYSEAIWYL 807
                 58899999999*********************9999999999999999999999999999998765554..33345555677776 PP

  == domain 7  score: 2.4 bits;  conditional E-value: 0.06
                 HT-SHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHHHHHHHHHHHCTTT-HHHHHHHHHHHHHTT-HHHHHHHHTTTS-T CS
       NARP1 205 lgsrekAleyidkaiehtptlvelyltKarilkhaGdlkkAaevmeearklDlaDRyiNskcakymLradeveeAeetvslFtre 289
                 ++++ +Ale i k ++++p    l++t ari+     l+kA ++ e+a  lD       +   k++L++++ e+ ++++s+F  +
  KHJ35160.1 811 THRKPRALEAIKK-VDNDP---ILFVTIARIFWGERKLEKAQNWFEKAIILDSDLGDTWAWYYKFLLQHGTEEKRADVLSKFILN 891
                 3344466665544.34444...579************************998753333455667888888888888888888665 PP

>> TPR_15  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.1         5   4.7e+03     244     257 ..     132     145 ..      99     152 .. 0.62
   2 ?    1.7   0.0      0.13   1.2e+02     122     182 ..     272     330 ..     263     356 .. 0.87
   3 ?    2.6   0.7     0.069        65     138     183 ..     442     487 ..     419     492 .. 0.74
   4 !   24.1   7.9   1.9e-08   1.8e-05     109     241 ..     559     688 ..     524     700 .. 0.87
   5 ?    0.9   0.0      0.23   2.2e+02     166     178 ..     681     693 ..     672     759 .. 0.58
   6 !   10.6   0.6   0.00025      0.24     130     203 ..     749     818 ..     713     835 .. 0.78

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 5
      TPR_15 244 nrkdplwllaYADa 257
                 +r++p ++ ++AD 
  KHJ35160.1 132 ERNNPKIQQQFADL 145
                 45555555555554 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.13
      TPR_15 122 rakdydriaellksleeeeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdssel 182
                 + +d++r++ ll+s+ +++   + a  ++a a+l++ +g+  aA +++ ++ +  p+++++
  KHJ35160.1 272 QVGDVKRVRVLLESVIRTN--PKHAPGWIAAARLEELAGKIVAARNVIARGCEFCPKNEDV 330
                 6789999999999976554..478999***********************99999998886 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.069
      TPR_15 138 eeeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdsselr 183
                 +++a   s  +++a a+l++q g+ ++   + r +lala +s+ l+
  KHJ35160.1 442 ARKAIPTSHEIWIAAARLQEQMGNANKVNVMKRAVLALAKESAMLK 487
                 45556689999*************9998888888888888887775 PP

  == domain 4  score: 24.1 bits;  conditional E-value: 1.9e-08
      TPR_15 109 sprlLssalellerakdydriaellksleeeeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgrraeLrellkawk 207
                 s +l+ +a +l ++ ++ +++ +ll++  + ea  qs+  ++++a+ + q+g+ d+A r++ +A + +p+++++  a + l  + ++ +++rellk+ +
  KHJ35160.1 559 SRKLWLAAADLEKNHGQKEALWKLLEK--SVEACPQSEVLWMMLAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEAENQQSEQARELLKTAR 655
                 446899999*****************9..889999**************************************************************** PP

      TPR_15 208 araesdasLwgplaaAlllLgrpkkALeylrkqa 241
                 ++a +d++ ++  a+    Lg+++ AL+++++ +
  KHJ35160.1 656 QEAPTDRVWMKSVAF-ERQLGNTEGALDLVNQAL 688
                 *******99999988.5679*******9988765 PP

  == domain 5  score: 0.9 bits;  conditional E-value: 0.23
      TPR_15 166 lrdyreAlalapd 178
                 l ++ +Al+l+p+
  KHJ35160.1 681 LDLVNQALQLFPN 693
                 5555555554444 PP

  == domain 6  score: 10.6 bits;  conditional E-value: 0.00025
      TPR_15 130 aellksleeeeaaeqsaafllaraelyrqegqtdaAlrdyreAlalapdsselraallWlliDlgrraeLrell 203
                 + +l +  ++ a  +s+  +   ++++r++++  +A +++ +Al+   +s  l ++ +W+l ++  r+   ++l
  KHJ35160.1 749 RGVLDR--ARLAIVNSPELWTESIRVERRANNIGQAKNLMAQALQQVTNSGLLYSEAIWYLENRTHRKP--RAL 818
                 444444..34445699*********************************************88877764..444 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.2   1.1e+03       4      34 .]     597     627 ..     595     627 .. 0.88
   2 !    7.4   0.0    0.0042         4      13      33 ..     673     693 ..     671     694 .. 0.94
   3 !    8.6   0.0    0.0017       1.6       2      29 ..     696     723 ..     695     728 .. 0.86
   4 ?    5.4   0.0     0.019        18      10      33 ..     837     860 ..     831     861 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.2
                 HHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALelnPnn 34 
                 +  l+    + g+ d A     +A   nPnn
  KHJ35160.1 597 WMMLAKEKWQAGEIDNARRVLGRAFNQNPNN 627
                 77788888899*******9999999999998 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0042
                 HTT-HHHHHHHHHHHHHHSTT CS
       TPR_1  13 klgkydeAleyyekALelnPn 33 
                 +lg+ + Al+  ++AL+l Pn
  KHJ35160.1 673 QLGNTEGALDLVNQALQLFPN 693
                 89******************8 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.0017
                 HHHHHHHHHHHHTT-HHHHHHHHHHHHH CS
       TPR_1   2 kalynlGnayfklgkydeAleyyekALe 29 
                 k +  +G++y   g++  A e+y+   +
  KHJ35160.1 696 KLWMIKGQIYEGEGNLPRAREAYSMGTK 723
                 78999******************97665 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.019
                 HHHHTT-HHHHHHHHHHHHHHSTT CS
       TPR_1  10 ayfklgkydeAleyyekALelnPn 33 
                 ++    k+++A   +ekA+ l+ +
  KHJ35160.1 837 IFWGERKLEKAQNWFEKAIILDSD 860
                 55666899***********99976 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.0      0.05        47      17      65 ..     282     330 ..     271     338 .. 0.86
   2 ?    0.8   0.0      0.58   5.5e+02      26      45 ..     447     466 ..     425     468 .. 0.82
   3 ?    1.1   0.2      0.46   4.4e+02       6      63 ..     537     594 ..     533     602 .. 0.84
   4 ?   -1.0   0.0       2.1     2e+03      41      72 ..     606     651 ..     574     652 .. 0.69
   5 !   15.2   0.0   1.9e-05     0.018      10      60 ..     676     726 ..     668     739 .. 0.88
   6 ?   -3.1   0.0       9.7   9.1e+03      12      30 ..     801     819 ..     800     821 .. 0.77

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.05
       TPR_9  17 vverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdapda 65 
                  +e+++  +P+++  +   ++l++  G + aA++   +  + +p+++d+
  KHJ35160.1 282 LLESVIRTNPKHAPGWIAAARLEELAGKIVAARNVIARGCEFCPKNEDV 330
                 57899999**************************999999999988875 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.58
       TPR_9  26 PddpeerrdRGlllaqlGcl 45 
                 P ++e +   ++l++q+G+ 
  KHJ35160.1 447 PTSHEIWIAAARLQEQMGNA 466
                 899999************86 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.46
       TPR_9   6 ireedweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalapdap 63 
                 i + ++  a a++   l+++ ++  +++  + l+   G+ +a  + Le  ++ +p+ +
  KHJ35160.1 537 IHRGQYGTARAIYAYALQVFVNSRKLWLAAADLEKNHGQKEALWKLLEKSVEACPQSE 594
                 6677888899999999999999999999999999999999998888999999998876 PP

  == domain 4  score: -1.0 bits;  conditional E-value: 2.1
       TPR_9  41 qlGclsaAladLeaylalap..............dapdaeairaqL 72 
                 q G +  A++ L ++  ++p              ++++ e++r++L
  KHJ35160.1 606 QAGEIDNARRVLGRAFNQNPnnediwlaavkleaENQQSEQARELL 651
                 5666777777777777777744444444444444666666666666 PP

  == domain 5  score: 15.2 bits;  conditional E-value: 1.9e-05
       TPR_9  10 dweralavverllllaPddpeerrdRGlllaqlGclsaAladLeaylalap 60 
                 + e al  v+  l+l+P+ p +++  G++++  G+l  A+++       +p
  KHJ35160.1 676 NTEGALDLVNQALQLFPNVPKLWMIKGQIYEGEGNLPRAREAYSMGTKACP 726
                 56889***********************************99876666666 PP

  == domain 6  score: -3.1 bits;  conditional E-value: 9.7
       TPR_9  12 eralavverllllaPddpe 30 
                 ++a++++e +   +P++ e
  KHJ35160.1 801 SEAIWYLENRTHRKPRALE 819
                 5799999999988888765 PP

>> TPR_11  TPR repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.6   2.4e+03      19      32 ..     319     332 ..     308     333 .. 0.81
   2 ?    2.1   0.0      0.17   1.6e+02      12      37 ..     387     412 ..     379     414 .. 0.86
   3 !    9.4   0.1   0.00087      0.82       6      32 ..     606     632 ..     602     634 .. 0.93
   4 !    7.1   0.0    0.0047       4.4       5      39 ..     672     706 ..     671     709 .. 0.89
   5 ?   -1.0   0.0       1.6   1.5e+03       1      26 [.     702     727 ..     702     729 .. 0.77
   6 ?    2.3   0.0      0.14   1.4e+02       9      26 ..     843     860 ..     842     867 .. 0.90

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.6
      TPR_11  19 kAlkldPdnaeayy 32 
                 + ++++P+n ++++
  KHJ35160.1 319 RGCEFCPKNEDVWL 332
                 6799******9986 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.17
      TPR_11  12 eAieaYkkAlkldPdnaeayynLGla 37 
                 +++  +k+A++l ++  +a + L++a
  KHJ35160.1 387 QSVMLWKEAVNLEENPDDARLLLAKA 412
                 566679*************9999987 PP

  == domain 3  score: 9.4 bits;  conditional E-value: 0.00087
      TPR_11   6 eqGkyeeAieaYkkAlkldPdnaeayy 32 
                 + G++++A  ++ +A + +P+n ++++
  KHJ35160.1 606 QAGEIDNARRVLGRAFNQNPNNEDIWL 632
                 67***********************97 PP

  == domain 4  score: 7.1 bits;  conditional E-value: 0.0047
      TPR_11   5 yeqGkyeeAieaYkkAlkldPdnaeayynLGlayy 39 
                 +++G+ e+A+   ++Al+l P+ + ++   G++y 
  KHJ35160.1 672 RQLGNTEGALDLVNQALQLFPNVPKLWMIKGQIYE 706
                 79********************9999988888886 PP

  == domain 5  score: -1.0 bits;  conditional E-value: 1.6
      TPR_11   1 GdayyeqGkyeeAieaYkkAlkldPd 26 
                 G++y   G+++ A eaY+   k +P+
  KHJ35160.1 702 GQIYEGEGNLPRAREAYSMGTKACPE 727
                 66666789*********977776665 PP

  == domain 6  score: 2.3 bits;  conditional E-value: 0.14
      TPR_11   9 kyeeAieaYkkAlkldPd 26 
                 k+e+A ++++kA+ ld+d
  KHJ35160.1 843 KLEKAQNWFEKAIILDSD 860
                 79**************98 PP

>> DUF3808  Protein of unknown function (DUF3808)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.1      0.32     3e+02     251     287 ..     432     468 ..     421     484 .. 0.85
   2 !    5.4   0.0    0.0066       6.2     245     297 ..     568     622 ..     544     631 .. 0.76
   3 !    7.3   0.0    0.0018       1.7     245     295 ..     671     721 ..     640     729 .. 0.87
   4 ?   -2.7   0.0       1.9   1.8e+03     269     296 ..     828     855 ..     812     860 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.32
     DUF3808 251 leeleelLlksrkrfPksalwllfearieslkgnlde 287
                  e ++++L k+rk+ P s  + + +ar+++  gn ++
  KHJ35160.1 432 SENAQKVLNKARKAIPTSHEIWIAAARLQEQMGNANK 468
                 68899************************99999876 PP

  == domain 2  score: 5.4 bits;  conditional E-value: 0.0066
     DUF3808 245 dg..lkapleeleelLlksrkrfPksalwllfearieslkgnldeAlelleeiie 297
                 d   +++++e l +lL+ks ++ P+s ++ ++ a+ +   g++d+A ++l  +++
  KHJ35160.1 568 DLekNHGQKEALWKLLEKSVEACPQSEVLWMMLAKEKWQAGEIDNARRVLGRAFN 622
                 3233677888899*********************************999988763 PP

  == domain 3  score: 7.3 bits;  conditional E-value: 0.0018
     DUF3808 245 dglkapleeleelLlksrkrfPksalwllfearieslkgnldeAlelleei 295
                 +++ +++e + +l+ +++++fP+   + + +++i++ +gnl +A e++++ 
  KHJ35160.1 671 ERQLGNTEGALDLVNQALQLFPNVPKLWMIKGQIYEGEGNLPRAREAYSMG 721
                 457899999***************999999**************9999864 PP

  == domain 4  score: -2.7 bits;  conditional E-value: 1.9
     DUF3808 269 alwllfearieslkgnldeAlelleeii 296
                  ++ +  ari   + +l++A++++e++i
  KHJ35160.1 828 PILFVTIARIFWGERKLEKAQNWFEKAI 855
                 57778889****************9987 PP

>> TPR_6  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.1       1.5   1.4e+03      14      26 ..      96     108 ..      88     111 .. 0.82
   2 ?   -1.3   0.0       4.6   4.4e+03       7      32 ..     262     292 ..     261     293 .. 0.68
   3 ?   -1.4   0.0         5   4.7e+03       4      25 ..     422     441 ..     420     448 .. 0.59
   4 ?    4.0   0.0     0.095        89       5      32 ..     597     626 ..     595     627 .. 0.81
   5 ?    5.6   0.1      0.03        29      12      32 ..     640     660 ..     631     661 .. 0.81
   6 ?    3.3   0.0      0.16   1.5e+02       9      32 ..     669     693 ..     664     693 .. 0.88
   7 ?    0.4   0.0       1.3   1.3e+03       7      24 ..     702     719 ..     698     720 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 1.5
                 HHHHHHHHHHHHH CS
       TPR_6  14 gdtdkAlealerl 26 
                 +d d+A ++++++
  KHJ35160.1  96 KDDDEADRIYQEV 108
                 5899*******98 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 4.6
                 HHHHHH.H....HHHHHHHHHHHHHHHH-TT CS
       TPR_6   7 alsyrk.l....gdtdkAlealerlikeYPd 32 
                 a+s+++ +    gd  + + +le++i+  P+
  KHJ35160.1 262 AKSQINeGeaqvGDVKRVRVLLESVIRTNPK 292
                 55555533555666667778999***99997 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 5
                 HHHHHHHHHHHHHHHHHHHHHH CS
       TPR_6   4 yklalsyrklgdtdkAlealer 25 
                 ++lal+++++  +++A + l++
  KHJ35160.1 422 LWLALAHLET--SENAQKVLNK 441
                 7889999876..3333333333 PP

  == domain 4  score: 4.0 bits;  conditional E-value: 0.095
                 HHHHHHHH.H.HHHHHHHHHHHHHHHH-TT CS
       TPR_6   5 klalsyrk.l.gdtdkAlealerlikeYPd 32 
                 ++ l+ +k + g+ d+A++ l r  ++ P+
  KHJ35160.1 597 WMMLAKEKwQaGEIDNARRVLGRAFNQNPN 626
                 666666666669***************999 PP

  == domain 5  score: 5.6 bits;  conditional E-value: 0.03
                 HHHHHHHHHHHHHHHHHH-TT CS
       TPR_6  12 klgdtdkAlealerlikeYPd 32 
                 + +++++A+e+l+  ++e P+
  KHJ35160.1 640 ENQQSEQARELLKTARQEAPT 660
                 434**************9996 PP

  == domain 6  score: 3.3 bits;  conditional E-value: 0.16
                 HHHH.HHHHHHHHHHHHHHHHH-TT CS
       TPR_6   9 syrk.lgdtdkAlealerlikeYPd 32 
                 ++++ lg+t+ Al++ ++ ++ +P+
  KHJ35160.1 669 AFERqLGNTEGALDLVNQALQLFPN 693
                 677768******************8 PP

  == domain 7  score: 0.4 bits;  conditional E-value: 1.3
                 HHHHHHHHHHHHHHHHHH CS
       TPR_6   7 alsyrklgdtdkAleale 24 
                 ++ y+  g+  +A+ea+ 
  KHJ35160.1 702 GQIYEGEGNLPRAREAYS 719
                 78899888********95 PP

>> Wzy_C_2  Virulence factor membrane-bound polymerase, C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.0     0.049        46     149     184 ..     422     457 ..     416     461 .. 0.88
   2 ?    0.8   0.0      0.42     4e+02     118     184 ..     568     635 ..     554     639 .. 0.82
   3 ?    7.5   0.1    0.0038       3.6     121     180 ..     639     698 ..     631     703 .. 0.84

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.049
     Wzy_C_2 149 lilslallGdedeAeqilararalfpeedakwvqlv 184
                 l l+la l   + A+++l +ar++ p +++ w++++
  KHJ35160.1 422 LWLALAHLETSENAQKVLNKARKAIPTSHEIWIAAA 457
                 56899999************************7665 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.42
     Wzy_C_2 118 llplspenlaaklalarklihlsPepavi.erlilslallGdedeAeqilararalfpeedakwvqlv 184
                  l+++  +++a  +l +k ++  P+  v+  +l+   +++G  d A+++l ra ++ p+++  w ++v
  KHJ35160.1 568 DLEKNHGQKEALWKLLEKSVEACPQSEVLwMMLAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAV 635
                 5666777778888899999999999998735688899*****************99999999886655 PP

  == domain 3  score: 7.5 bits;  conditional E-value: 0.0038
     Wzy_C_2 121 lspenlaaklalarklihlsPepavierlilslallGdedeAeqilararalfpeedakw 180
                 ++ ++ ++  +l + + +  P+ +v  +      +lG +++A++ + +a  lfp+  + w
  KHJ35160.1 639 AENQQSEQARELLKTARQEAPTDRVWMKSVAFERQLGNTEGALDLVNQALQLFPNVPKLW 698
                 55566666777778888899***********************************99988 PP

>> TPR_21  Tetratricopeptide repeat-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.4     0.023        21      35      93 ..      97     158 ..      93     162 .. 0.74
   2 ?   -2.3   0.0       3.2   3.1e+03      86     121 ..     270     305 ..     258     311 .. 0.82
   3 ?   -3.5   0.5       7.4     7e+03      91     118 ..     451     478 ..     428     486 .. 0.47
   4 ?   12.8   3.1   7.8e-05     0.074      52     143 ..     570     658 ..     535     663 .. 0.76
   5 ?    8.0   0.8    0.0023       2.1      81     179 ..     633     728 ..     632     740 .. 0.73
   6 ?   -2.3   0.0       3.3   3.1e+03     147     168 ..     737     758 ..     727     760 .. 0.89

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.023
      TPR_21  35 qaeeAsalYqqlqeaveakdaa....kakeaaeeladeyggtaYaalaaLllAkaaveagdla 93 
                   +eA  +Yq+++e++++  +a    ++k++ ee + ++++   +++a L  A   v+ +d+a
  KHJ35160.1  97 DDDEADRIYQEVDEKMDKRRKArreaRLKTELEEYERNNPKI-QQQFADLKRALGTVSDEDWA 158
                 56899*********9995555522226666777776666666.78999999999988888876 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 3.2
      TPR_21  86 aveagdlaaAkaqLewvlekakdeelkalarlRLar 121
                 +++ gd+++ +  Le+v+  +++++   +a  RL +
  KHJ35160.1 270 EAQVGDVKRVRVLLESVIRTNPKHAPGWIAAARLEE 305
                 456789999999999999999999999999999965 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 7.4
      TPR_21  91 dlaaAkaqLewvlekakdeelkalarlR 118
                 ++  A+a+L++ + +a++ ++ + a l 
  KHJ35160.1 451 EIWIAAARLQEQMGNANKVNVMKRAVLA 478
                 3334444444444444444444444444 PP

  == domain 4  score: 12.8 bits;  conditional E-value: 7.8e-05
      TPR_21  52 akdaakakeaaeeladeyggtaYaalaaLllAkaaveagdlaaAkaqLewvlekakdeelkalarlRLarvllaekkydeAlktLeakkeea 143
                 +k++ + +++ + l+++ +  +  ++  ++lAk++ +ag++++A+  L ++ ++++++e   la ++L    +++++ ++A ++L+++++ea
  KHJ35160.1 570 EKNHGQKEALWKLLEKSVEACPQSEVLWMMLAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKL---EAENQQSEQARELLKTARQEA 658
                 5555556777888888899999999*********************************8888888876...567778888888888777765 PP

  == domain 5  score: 8.0 bits;  conditional E-value: 0.0023
      TPR_21  81 llAkaaveagdlaaAkaqLewvlekakdeelkalarlRLarvllaekkydeAlktLeakkeeaf.aalvaelrGDilvaqgkldeAraaYqaAlaalee 178
                 ++ k ++e+++ ++A++ L+ + ++a+ +     + ++  +   + ++++ Al +++++ +      +   ++G i+  +g+l  Ar+aY+ + +a  e
  KHJ35160.1 633 AAVKLEAENQQSEQARELLKTARQEAPTDR----VWMKSVAFERQLGNTEGALDLVNQALQLFPnVPKLWMIKGQIYEGEGNLPRAREAYSMGTKACPE 727
                 556777888888888888888877776663....34455556667788888888887665543213456689*******************99988766 PP

      TPR_21 179 k 179
                 +
  KHJ35160.1 728 S 728
                 5 PP

  == domain 6  score: -2.3 bits;  conditional E-value: 3.3
      TPR_21 147 lvaelrGDilvaqgkldeAraa 168
                 + +e+ G+++ a+g ld Ar a
  KHJ35160.1 737 RLEERAGNLVKARGVLDRARLA 758
                 67999**************976 PP

>> Suf  Suppressor of forked protein (Suf)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       3.9   3.7e+03     184     222 ..     108     145 ..      93     190 .. 0.48
   2 ?   -1.8   0.0       2.6   2.4e+03      85     119 ..     275     306 ..     272     388 .. 0.65
   3 ?    3.4   0.0     0.069        65      17      45 ..     432     460 ..     422     471 .. 0.86
   4 ?    3.5   0.0     0.062        59     105     143 ..     644     697 ..     605     701 .. 0.66

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.9
         Suf 184 asleeskvpqaqeskkrklesedssvkkPdklqmvespk 222
                    +++k  +a ++ + k+e e+ + ++P++ q  +   
  KHJ35160.1 108 VDEKMDKRRKARREARLKTELEEYERNNPKIQQQFAD-L 145
                 3333344455555555555555555567776665532.2 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 2.6
         Suf  85 ddnnaRvlfekvvsklskekeakelykkfleyest 119
                 d++++Rvl+e+v+++  k+    + +   ++ e  
  KHJ35160.1 275 DVKRVRVLLESVIRTNPKHA---PGWIAAARLEEL 306
                 88999999999998866655...444444444444 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.069
         Suf  17 ikgaRkvFkkARkkprltyevyvasAllE 45 
                  ++a kv +kARk   +++e+++a+A l 
  KHJ35160.1 432 SENAQKVLNKARKAIPTSHEIWIAAARLQ 460
                 577899********************875 PP

  == domain 4  score: 3.5 bits;  conditional E-value: 0.062
         Suf 105 e...............akelykkfleyestfgdlssilklekRmeelfpedskl 143
                                 +  ++ k + +e + g+ +  l l ++  +lfp+ +kl
  KHJ35160.1 644 SeqarellktarqeapTDRVWMKSVAFERQLGNTEGALDLVNQALQLFPNVPKL 697
                 0333334444444444777*****************************997765 PP

>> CREPT  Cell-cycle alteration and expression-elevated protein in tumour
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.2     0.086        81      61     121 ..     118     182 ..      96     196 .. 0.48
   2 ?    7.3   0.9    0.0053         5      28     107 ..     417     499 ..     369     505 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.086
       CREPT  61 aeYnkrLeaelee..Rk..klakmledfleaqkellakaeekleelkeklekvksvrkelkshiq 121
                 a   +rL+ elee  R+  k++++ +d+++a+ +  ++  ++l e+ +   k + +++ l++++ 
  KHJ35160.1 118 ARREARLKTELEEyeRNnpKIQQQFADLKRALGTVSDEDWANLPEVGDLTGKNRRNKQALRQRFY 182
                 23344555555531122223444444455555555555555555555555555555555555555 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0053
       CREPT  28 PpevsdvsllekikdkeeaekllkqveealellaeY...nkrLeaeleeRkklakmledfleaqkellakaeekleelkekle 107
                 P +v+    l++++ +e+a+k l++ ++a+   +e     +rL++++ + +k++ m ++ l++ ke++  ++e+     ek e
  KHJ35160.1 417 PLSVELWLALAHLETSENAQKVLNKARKAIPTSHEIwiaAARLQEQMGNANKVNVMKRAVLALAKESAMLKREEWITEAEKCE 499
                 677777778999******************99998634469*************************99888877666556555 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       3.2     3e+03      59      74 ..     400     415 ..     395     417 .. 0.73
   2 ?   -2.3   0.1       6.2   5.8e+03      20      31 ..     433     444 ..     423     465 .. 0.55
   3 ?    0.6   0.2      0.77   7.3e+02      15      35 ..     538     558 ..     533     588 .. 0.79
   4 ?   -1.7   0.3       3.8   3.6e+03      15      30 ..     640     655 ..     629     658 .. 0.62
   5 ?    7.2   0.0    0.0064       6.1      11      33 ..     669     691 ..     660     727 .. 0.75
   6 ?   -1.6   0.0       3.6   3.4e+03      13      34 ..     773     794 ..     769     809 .. 0.61
   7 ?    4.3   0.0     0.054        51      47      72 ..     830     855 ..     815     863 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 3.2
      TPR_12  59 gryeeAlelleealai 74 
                 +++++A+ ll +a++i
  KHJ35160.1 400 ENPDDARLLLAKATEI 415
                 5778888888888776 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 6.2
      TPR_12  20 deAlellekale 31 
                 + A++ l+ka+ 
  KHJ35160.1 433 ENAQKVLNKARK 444
                 344444444433 PP

  == domain 3  score: 0.6 bits;  conditional E-value: 0.77
      TPR_12  15 rlgrydeAlellekaleiarr 35 
                 ++g+y  A++++  al+++ +
  KHJ35160.1 538 HRGQYGTARAIYAYALQVFVN 558
                 789999999999999999843 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 3.8
      TPR_12  15 rlgrydeAlellekal 30 
                 + ++ ++A+ell++a+
  KHJ35160.1 640 ENQQSEQARELLKTAR 655
                 3455666666666664 PP

  == domain 5  score: 7.2 bits;  conditional E-value: 0.0064
      TPR_12  11 avlrrlgrydeAlellekaleia 33 
                 a++r+lg+ + Al+l ++al+++
  KHJ35160.1 669 AFERQLGNTEGALDLVNQALQLF 691
                 45666777777777777776665 PP

  == domain 6  score: -1.6 bits;  conditional E-value: 3.6
      TPR_12  13 lrrlgrydeAlellekaleiar 34 
                 +rr+ +  +A  l  +al++++
  KHJ35160.1 773 ERRANNIGQAKNLMAQALQQVT 794
                 4555555555556666665554 PP

  == domain 7  score: 4.3 bits;  conditional E-value: 0.054
      TPR_12  47 tlrnLgrlyralgryeeAlelleeal 72 
                    +++r+++   ++e+A++++e+a+
  KHJ35160.1 830 LFVTIARIFWGERKLEKAQNWFEKAI 855
                 46788999998999999999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (925 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1016  (0.056668); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                        19  (0.00105974); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              19  [number of targets reported over threshold]
# CPU time: 0.86u 0.29s 00:00:01.14 Elapsed: 00:00:00.55
# Mc/sec: 5069.56
//
Query:       KHJ35161.1  [L=1397]
Description: putative kinesin-related motor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.2e-109  365.4   0.0   4.6e-109  364.4   0.0    1.6  1  Kinesin         Kinesin motor domain
    2.3e-36  125.6  12.1    1.6e-31  109.8   0.1    3.5  4  Kinesin_assoc   Kinesin-associated
    2.9e-32  112.5   1.7      1e-31  110.6   0.0    2.9  3  DUF3694         Kinesin protein
    3.3e-24   85.5   0.0    9.6e-24   84.0   0.0    1.8  1  Microtub_bd     Microtubule binding
     0.0093   16.4   0.8      0.025   15.0   0.8    1.8  1  KIF1B           Kinesin protein 1B
  ------ inclusion threshold ------
       0.15   12.2  18.7       0.12   12.5   1.7    3.2  3  UPF0242         Uncharacterised protein family (UPF0242) N-te
        1.6    9.4  16.0       0.13   12.9   3.1    3.5  3  HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interac


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  364.4   0.0  1.8e-112  4.6e-109       1     333 []      15     366 ..      15     366 .. 0.95

  Alignments for each domain:
  == domain 1  score: 364.4 bits;  conditional E-value: 1.8e-112
                 EE-SSSHHHHTTTTEBCEEEEC........TCTCEEEEEEEEECTTSCEEEEESEEEETTS-.......HHHHHHHHHHHHHHHHHTTSEEEEEEEEST CS
     Kinesin   1 RvRplnekekeeeeeeevevee........ekkeeekkskkenkeeeekkfkFdkvfdeeat.......qeevyeetakplvesvleGynatifaYGqt 84 
                 RvRp+n++e ++ +++++++++           ee  ksk++ ++  +k f+Fdk +++ +        q+++ +++ kpl++++++Gyn +ifaYGqt
  KHJ35161.1  15 RVRPFNAREIDRGAKCIIQMKDaqtilsppPGFEERLKSKSSGRDIGQKVFAFDKSYWSFNRtdahyagQSDLHNDLGKPLLDNAFKGYNNCIFAYGQT 113
                 9******************99999**9998666777788888899999*******99996666789999****************************** PP

                 TSSHHHHHTBCTTTSBSHHHHHHHHHHHHHHHCTTTHEEEEEEEEEEEEEETTEEEETTSTTTTSTSSEBEEEECTTSCCEEETTS--EEESSHHHHHH CS
     Kinesin  85 gsGKTyTmegkeeeeeGiipraleelFesikkekeekekefsvkvsylEiYneeiyDLLeskkskkkkklkiredskkgevyvkgltevevksaeevle 183
                 gsGK+y+m+g   +e+G+ip++++++F +i++ +++ + +f+v+vsylEiYne+++DLL+++   +k++lk+re++++g  yv++l +  v s++e+ +
  KHJ35161.1 114 GSGKSYSMMGY-GKEAGVIPQICQDMFVRIENIQKDPNFRFTVEVSYLEIYNERVRDLLNPS---TKSNLKVREHPSTG-PYVEDLAKLVVGSFNEIEH 207
                 **********8.899*********************9************************9...4567********98.******************* PP

                 HHHHHHHHHTSTTSSCTSHHCCSEEEEEEEEEEEETTTTTC.EEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHT.... CS
     Kinesin 184 llekgeknrkvaetklneeSSRSHavftitleqknlkeete.ekvkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaek.... 277
                 l+++g+k r+va+t++ne+SSRSHavft+t++qk+++ e++ +  k++k++LvDLAGsEra++tg a+g rlkE+a+iN+SL++Lgrvi+aLae     
  KHJ35161.1 208 LMDEGNKARTVAATNMNETSSRSHAVFTLTVTQKRHDIESKmTMEKVAKISLVDLAGSERATSTG-ATGARLKEGAEINRSLSTLGRVIAALAELsdgk 305
                 ***********************************99988865699*******************.5899***********************999999 PP

                 .....CCTSTSCGGGSHHHHHTGGGHSSSSEEEEEEEE-TBGGGHHHHHHHHHHHHHHCTT CS
     Kinesin 278 .....kkskhipYRdSkLTrlLqdsLgGnsktlmivtvspssenleetlstlkfaerakei 333
                      k    +pYRdS LT+lL+dsLgGns t+mi+ +sp++ n++etlstl++a+ ak+i
  KHJ35161.1 306 kkkggKGVGQVPYRDSVLTWLLKDSLGGNSMTAMIAAISPADINFDETLSTLRYADSAKRI 366
                 999998999**************************************************87 PP

>> Kinesin_assoc  Kinesin-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.1       0.8     2e+03      49      74 ..     198     230 ..     145     305 .. 0.47
   2 !   23.0   0.2   2.8e-08   7.2e-05       1      27 [.     370     396 ..     370     410 .. 0.89
   3 !  109.8   0.1   6.3e-35   1.6e-31      76     180 ..     413     514 ..     396     515 .. 0.91
   4 ?   -2.5   0.2       1.8   4.7e+03      87     137 ..     772     823 ..     699     825 .. 0.69

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.8
  Kinesin_assoc  49 l.........aseraknlsavtaavaglspsssls 74 
                    +             ++ ++a t a + ++  ss s
     KHJ35161.1 198 VvgsfneiehL--MDEGNKARTVAATNMNETSSRS 230
                    13333333220..1122222222222222222221 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 2.8e-08
  Kinesin_assoc   1 avinedPnaklvrelkeeverlkdlll 27 
                    av+ned na+++relkee+e+l+  l 
     KHJ35161.1 370 AVVNEDANARMIRELKEELEALRGKLS 396
                    8**********************8875 PP

  == domain 3  score: 109.8 bits;  conditional E-value: 6.3e-35
  Kinesin_assoc  76 lssraesvssleerivfspaseeaierlketekiiaelnetWeeklrkteairlereallaelGvairedGGtlGvfsPkktPhlvnlnedPlmse 171
                     +++  s+++++ +i    ++ e  e+l ++ek+  +ln+tWeekl kte+i+ erea l+elG++i++  G +G+++Pkk Phlvnl +dPl++e
     KHJ35161.1 413 FDKQIVSITQSDGTI-KKVSKAEIAEQLSQSEKLYQDLNQTWEEKLAKTEEIHKEREAALEELGISIEK--GFVGLHTPKKMPHLVNLSDDPLLAE 505
                    566677888999999.6678899********************************************87..6************************ PP

  Kinesin_assoc 172 CllyyikdG 180
                    Cl+y++k+G
     KHJ35161.1 506 CLVYNLKPG 514
                    *******99 PP

  == domain 4  score: -2.5 bits;  conditional E-value: 1.8
  Kinesin_assoc  87 eerivfspaseeaierlketekii.aelnetWeeklrkteairlereallae 137
                    +e  + s+a ++ +e   + e +i  el +   e l + ++ r+e ++ ++e
     KHJ35161.1 772 QEISMLSNAINRDVEENFKKETLIeEELRDIKVETLSQLDEQRMELQECIQE 823
                    3333456666766766666666662468888888888888888887766655 PP

>> DUF3694  Kinesin protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0         4     1e+04      98     114 ..     641     657 ..     595     661 .. 0.73
   2 ?   -2.0   0.1         2   5.2e+03      36     104 ..     792     855 ..     778     861 .. 0.59
   3 !  110.6   0.0   4.1e-35     1e-31       1     152 [.    1170    1317 ..    1170    1319 .. 0.97

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4
     DUF3694  98 ieasWdsslhdsllLnr 114
                  e +Wd + ++s+l+ r
  KHJ35161.1 641 SEVEWDGTRPNSPLMYR 657
                 4778**99999999866 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 2
     DUF3694  36 deLlwervrfppgrevrvgdvrlldlskgkskdses.lsadlslklls.eptveesadgtsevkieasWds 104
                 ++L +e++     r+++v     ld ++ + +++ + ++ + +++l++  p + ++++++ + + ++ W s
  KHJ35161.1 792 ETLIEEEL-----RDIKVETLSQLDEQRMELQECIQeID-PQKIELAEiLPAL-SKEEQNIARRTVGLWRS 855
                 35888888.....99999998888863334444444222.2233333322233.34444567777777777 PP

  == domain 3  score: 110.6 bits;  conditional E-value: 4.1e-35
     DUF3694    1 eYvpVpvdpkkevd..vFqLrqglqrrvvvtltqrsedeLlwervrfppgrevrvgdvrlldlskgkskdseslsadlslkllseptveesadgtse 95  
                  eY pV+v +k++ d  +FqL+qglqrrv+v+l+++s d L w+++     +++rv++ +  d ++g+  +  ++s  ++l+l+s+p ++++ +gts+
  KHJ35161.1 1170 EYLPVKVVHKNNHDkgLFQLHQGLQRRVMVNLVHSSDDALSWQNM-----SSLRVSELHIED-NDGNILSKGNQSMMIPLRLISKPILRQNCNGTSS 1260
                  7**********99567*****************************.....************.899999999999********************** PP

     DUF3694   96 vkieasWdsslhdsllLnrvTkdgervyltvavdlvseeveepvvfrkeicvriygr 152 
                  v++ ++W+ss   sl L+r+T+d+ ++  + ++dl+s +++ p++f++++   i++r
  KHJ35161.1 1261 VTLIGQWESSNYSSLILDRITADKLKIKTIFSWDLTSPKLSTPLTFSMDTFSVILPR 1317
                  ***************************************************999997 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.0   0.0   3.8e-27   9.6e-24      20     149 .]       8     171 ..       5     171 .. 0.85

  Alignments for each domain:
  == domain 1  score: 84.0 bits;  conditional E-value: 3.8e-27
                  TB-EEEEEEECCCS-T......EEEETTT..............................TTTEEEE-SEEEECTTHCCCCCCCC.HHHHHHHHTT--E CS
  Microtub_bd  20 GniRvfarvrpelesek.....akikfpe...........................eekkkkkefsFdrvfeseseqeevfeei.sqlvqsaldgynv 84 
                  Gni v +rvrp + +e      + i++++                                k  +sF+r   + + q+++++++ + l++ a++gyn 
   KHJ35161.1   8 GNIKVVVRVRPFNAREIdrgakCIIQMKDaqtilspppgfeerlkskssgrdigqkVFAFDKSYWSFNRTDAHYAGQSDLHNDLgKPLLDNAFKGYNN 105
                  9************998889998777777455677788888889999999766665433345555666666666779*******9568*********** PP

                  EEEEEES................ST-HCHHHHHHHHHHCCTS.CCCCEEEEEEEEEEESS-EEETT CS
  Microtub_bd  85 cifaygqTGsGKtyTmegeeeeagmipraveeifetiselke.kgwkyeielqfveiynekvqDlL 149
                  cifaygqTGsGK+y m+g  +eag+ip++ + +f  i++ ++  + ++++e++++eiyne+v+DlL
   KHJ35161.1 106 CIFAYGQTGSGKSYSMMGYGKEAGVIPQICQDMFVRIENIQKdPNFRFTVEVSYLEIYNERVRDLL 171
                  **********************************99998655499********************8 PP

>> KIF1B  Kinesin protein 1B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.8   9.9e-06     0.025       1      48 [.     946     987 ..     946     987 .. 0.91

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 9.9e-06
       KIF1B   1 LenRlvdMRemYeeskegesrsh.svdtseslsgsDPFyEs.qenhsLiG 48 
                 L+ R+++MR+m   ++++e+  + +++        +PF+E  +++++ +G
  KHJ35161.1 946 LQRRVQLMRQMQKFMDKPEYLRKnKPQ--------NPFTEKfMPQFTHVG 987
                 789*****************8886666........******99***9999 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   1.7   4.6e-05      0.12      86     167 ..     376     480 ..     344     481 .. 0.77
   2 ?    8.7   3.5   0.00068       1.7      85     166 ..     748     832 ..     722     840 .. 0.76
   3 ?   -1.1   0.3      0.68   1.8e+03      50     125 ..    1117    1196 ..    1101    1215 .. 0.68

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.6e-05
     UPF0242  86 tkeealeelqeeeeeLkee.........................ldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqellqeyqetie 159
                  ++  ++el+ee e L+ +                         + + + +++  k  ++++ e+l+++ + +++l +  ee+La+ +e ++e ++ +e
  KHJ35161.1 376 ANARMIRELKEELEALRGKlsggtggpseeiypenvpfdkqivsITQSDGTIK--KVSKAEIAEQLSQSEKLYQDLNQTWEEKLAKTEEIHKEREAALE 472
                 34446777777777777777777888888888888888888844444444444..5567899************************************* PP

     UPF0242 160 eqrsvlek 167
                 e+  ++ek
  KHJ35161.1 473 ELGISIEK 480
                 *9999997 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00068
     UPF0242  85 ktkeealeelqeeeeeL......keeldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqellqeyqetieeqrsvle 166
                  + e+++++++e +++L      ++e++  +++++r  een +   k   i e+  + k e  +qL+e++  lqe  ++i  q+ +l 
  KHJ35161.1 748 GEAEDSVRDVREIQNKLggddegHQEISMLSNAINRDVEENFK---KETLIEEELRDIKVETLSQLDEQRMELQECIQEIDPQKIELA 832
                 4455555555555555522111166699999999999998854...5566788*******************************9985 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.68
     UPF0242   50 llllllkwekalkeklekskleekeaklteldeglktkee........aleelqeeeeeLkeeldakeeelerlkeenqqLqek 125 
                  ++  ll w++      +++  e++++k+t  +e+   +ee        ++ el e+ e L  ++ +k++  + l +  q Lq +
  KHJ35161.1 1117 HFEKLLSWDDMQ----DNNAEEKRQRKITRVSESAFLNEErykifakiKILELAENGEYLPVKVVHKNNHDKGLFQLHQGLQRR 1196
                  444455553332....33444555677777775554444445666668888999999999999888888888777777777755 PP

>> HIP1_clath_bdg  Clathrin-binding domain of Huntingtin-interacting protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1      0.82   2.1e+03      35      67 ..     362     394 ..     356     397 .. 0.65
   2 ?    2.1   2.2      0.12     3e+02       9      48 ..     433     472 ..     416     480 .. 0.49
   3 ?   12.9   3.1   5.1e-05      0.13      28      81 ..     790     844 ..     773     852 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.82
  HIP1_clath_bdg  35 elerlkeeaerkleeqkeelekLkreleakrae 67 
                     + +r+k++a  +++  +  + +Lk+elea r +
      KHJ35161.1 362 SAKRIKNHAVVNEDANARMIRELKEELEALRGK 394
                     556666666666667777777777777766654 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.12
  HIP1_clath_bdg   9 Aevtkqlsvarqaqeeverekkeleeelerlkeeaerkle 48 
                     Ae++ qls++ +  ++++++ +e   + e++++e+e  le
      KHJ35161.1 433 AEIAEQLSQSEKLYQDLNQTWEEKLAKTEEIHKEREAALE 472
                     3444444444444444444444444444444444443333 PP

  == domain 3  score: 12.9 bits;  conditional E-value: 5.1e-05
  HIP1_clath_bdg  28 ekke.leeelerlkeeaerkleeqkeelekLkreleakraelarlkssLesseqs 81 
                     +k++ +eeel+++k e+ ++l+eq++el++  +e+  ++ ela++  +L+++eq 
      KHJ35161.1 790 KKETlIEEELRDIKVETLSQLDEQRMELQECIQEIDPQKIELAEILPALSKEEQN 844
                     34432699******************************************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1397 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       836  (0.0466284); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.91u 0.28s 00:00:01.19 Elapsed: 00:00:00.45
# Mc/sec: 9275.17
//
Query:       KHJ35162.1  [L=203]
Description: putative cupin domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-08   33.9   0.0    4.2e-08   32.8   0.0    1.6  1  Cupin_2   Cupin domain
  ------ inclusion threshold ------
      0.013   15.2   0.0      0.021   14.5   0.0    1.3  1  Cupin_3   Protein of unknown function (DUF861)


Domain annotation for each model (and alignments):
>> Cupin_2  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.8   0.0   4.7e-12   4.2e-08       3      69 ..     115     181 ..     113     183 .. 0.84

  Alignments for each domain:
  == domain 1  score: 32.8 bits;  conditional E-value: 4.7e-12
                 EEEETTEEEEEECSSSEE.EEEEEEESEEEEEEC.TEEEEEETTEEEEE-TT-EEEEEE-SSS.-EEEEE CS
     Cupin_2   3 velppGesapshrHpged.effyVleGegeltvd.geeveleaGdsvyfpagtpHrfrNtgde.parllv 69 
                 v ++p   +p+  H+ +   +++V+eGe+el++d ge+ +l++Gds +  a t H++rNt+d+  ar+++
  KHJ35162.1 115 VDFAP--ATPPYMHRTQSiDYGIVIEGEIELILDsGEKRRLRRGDSCVQRA-TMHAWRNTSDTeWARMVF 181
                 56677..677888888888*************887***********98777.99*******986666665 PP

>> Cupin_3  Protein of unknown function (DUF861)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.5   0.0   2.3e-06     0.021      30      61 ..     135     166 ..     125     178 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 2.3e-06
                 EEEECEEEEEETTTEEEEEETTEEEEE-TTEE CS
     Cupin_3  30 yileGevkvtpeggetvelraGDlvvlpkgls 61 
                  ++eGe+++  ++ge+++lr GD+ v ++ + 
  KHJ35162.1 135 IVIEGEIELILDSGEKRRLRRGDSCVQRATMH 166
                 69***********************9998874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (203 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       305  (0.0170115); expected 358.6 (0.02)
Passed bias filter:                      290  (0.0161749); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.20s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1563.37
//
Query:       KHJ35163.1  [L=261]
Description: putative endosomal sorting complex assembly [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-33  115.1   8.5    3.9e-33  114.6   8.5    1.2  1  Mod_r     Modifier of rudimentary (Mod(r)) protein
     0.0045   17.2   2.2     0.0069   16.6   2.2    1.3  1  CREPT     Cell-cycle alteration and expression-elevated prote
  ------ inclusion threshold ------
      0.014   15.5   1.4       0.25   11.4   0.2    2.7  3  Xrn1_D3   Exoribonuclease 1 Domain-3
      0.056   13.8   2.4      0.081   13.3   0.8    2.1  2  CCDC-167  Coiled-coil domain-containing protein 167
        0.4   10.1   8.1        1.1    8.6   0.4    2.2  2  CAP_N     Adenylate cyclase associated (CAP) N terminal


Domain annotation for each model (and alignments):
>> Mod_r  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.6   8.5   1.1e-36   3.9e-33       2     145 ..      96     248 ..      95     249 .. 0.97

  Alignments for each domain:
  == domain 1  score: 114.6 bits;  conditional E-value: 1.1e-36
       Mod_r   2 klSkeeLqelledeeklealvk...tl.pevkqlkeekeellaeneslaeknlslepeleelrselqekleelkelekefeekeqeldellqkfspdal 96 
                  ++k++L e+le++++l+a+++   t+ p++ ++++ +e  l+en++la++  + e +l +lrse q++l  +++le+++++k++e+d++l +f p +l
  KHJ35163.1  96 GKTKQQLIEILENHKLLNAIANstsTAyPSISEYQSFLEASLKENIALASHLKEVEARLIQLRSENQAQLLATHALERQWRQKQSEMDQALAPFAPPSL 194
                 589*******************88866799********************99999******************************************** PP

       Mod_r  97 larLqtavaeaeeeSealaeefle.....geieldeFvkefkekRklyHlrkeK 145
                 +++L++a++e e ++ +l+ +f e     +e+e+ ++v++f+e+Rkly+ r +K
  KHJ35163.1 195 YQNLNQAIQEEELMCSSLETSFFEgdgiaSEREVTDWVRKFRESRKLYYFRLAK 248
                 ***********************99***99*********************998 PP

>> CREPT  Cell-cycle alteration and expression-elevated protein in tumour
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   2.2   1.9e-06    0.0069      32     120 ..      98     186 ..      86     207 .. 0.90

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 1.9e-06
       CREPT  32 sdvsllekikdkeeaekllkqveealellaeYnkrLeaeleeRkklakmledfleaqkellakaeekleelkeklekvksvrkelkshi 120
                 ++++l+e +++++  ++ +++ ++a+  ++eY + Lea l+e   la+ l++  + + +l ++++++l  ++   ++ +++++e+++ +
  KHJ35163.1  98 TKQQLIEILENHKLLNAIANSTSTAYPSISEYQSFLEASLKENIALASHLKEVEARLIQLRSENQAQLLATHALERQWRQKQSEMDQAL 186
                 4678899999**************************************************************************99876 PP

>> Xrn1_D3  Exoribonuclease 1 Domain-3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   7.1e-05      0.25      15      37 ..      31      53 ..      29      64 .. 0.86
   2 ?    2.1   0.0     0.058   2.1e+02       8      26 ..     143     161 ..     118     173 .. 0.87
   3 ?   -2.9   0.0       2.1   7.4e+03       6      16 ..     226     236 ..     224     238 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.1e-05
     Xrn1_D3 15 vkadlvkVslESdSltkfSiaai 37
                + +++++ slE +S++  Si+++
  KHJ35163.1 31 QETNFINTSLEPQSISSSSIQEL 53
                789******************84 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.058
     Xrn1_D3   8 iaewLKkvkadlvkVslES 26 
                 +a +LK+v a l++   E 
  KHJ35163.1 143 LASHLKEVEARLIQLRSEN 161
                 6789*********987665 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 2.1
     Xrn1_D3   6 keiaewLKkvk 16 
                 +e+++w +k++
  KHJ35163.1 226 REVTDWVRKFR 236
                 5899**99886 PP

>> CCDC-167  Coiled-coil domain-containing protein 167
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0      0.88   3.2e+03      23      47 ..      36      60 ..      31      68 .. 0.74
   2 ?   13.3   0.8   2.3e-05     0.081      41      74 ..     134     170 ..     101     174 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.88
    CCDC-167 23 verrlrkeelseeeResleeEeasl 47
                ++++l+ +++s+   ++l  E +++
  KHJ35163.1 36 INTSLEPQSISSSSIQELSIENTNI 60
                7889999999999988888665544 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 2.3e-05
    CCDC-167  41 e...eEeaslkeqleenekeLksLrkeNrksmllsva 74 
                 e   +E  +l ++l+e e +L +Lr eN+ + l   a
  KHJ35163.1 134 EaslKENIALASHLKEVEARLIQLRSENQAQLLATHA 170
                 34447999********************988887655 PP

>> CAP_N  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.1   2.1    0.0038        14     245     262 ..      16      33 ..       3      54 .. 0.51
   2 ?    8.6   0.4   0.00031       1.1      48     122 ..     117     189 ..      86     204 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.1 bits;  conditional E-value: 0.0038
                 XX.....XXXXXXXX.... CS
       CAP_N 245 gg.pppPpPpPppasvfee 262
                 gg  +p pPpPp + ++e+
  KHJ35163.1  16 GGnKKP-PPPPPKPGTQET 33 
                 332344.444443333322 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00031
                 XXXSXH.HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHBE---..HHHHHHHCHHH CS
       CAP_N  48 aaaaaaaksveaFdelisgsvkefvelskkiggevaeqaelvkkafeaqrkfllvaskakkPad.seelqelLkpl 122
                 +++++a +s+++++++++ s+ke ++l++++ + v   a+l++   e+q ++l + +  ++  + ++e+ ++L+p 
  KHJ35163.1 117 NSTSTAYPSISEYQSFLEASLKENIALASHLKE-V--EARLIQLRSENQAQLLATHALERQWRQkQSEMDQALAPF 189
                 3333455**********************9976.4..566777778888888888777777655688888888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1150  (0.0641419); expected 358.6 (0.02)
Passed bias filter:                      643  (0.0358637); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 1925.07
//
Query:       KHJ35164.1  [L=437]
Description: putative ring-14 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.7e-37  127.9   7.6      3e-27   96.5   2.8    2.2  2  SPX           SPX domain
    4.1e-07   29.8   8.9    8.9e-07   28.7   8.9    1.6  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
    1.3e-05   25.5  10.6    3.6e-05   24.0  10.6    1.9  1  zf-RING_2     Ring finger domain
    1.4e-05   25.1   9.6    1.4e-05   25.1   9.6    2.1  2  zf-C3HC4_4    zinc finger of C3HC4-type, RING
    3.5e-05   23.6  11.9    6.8e-05   22.6  10.9    2.0  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
      4e-05   23.4  10.2      4e-05   23.4  10.2    2.1  2  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
     0.0018   18.2   4.6     0.0018   18.2   4.6    2.3  3  zf-RING_UBOX  RING-type zinc-finger
     0.0057   16.6  10.4     0.0057   16.6  10.4    2.3  3  zf-RING_5     zinc-RING finger domain
  ------ inclusion threshold ------
      0.014   15.2   9.5       0.17   11.8  10.0    2.4  2  Prok-RING_4   Prokaryotic RING finger family 4
       0.63    9.9   8.3       0.15   11.9   4.4    2.0  2  zf-RING_4     RING/Ubox like zinc-binding domain
        8.3    6.7  10.0       0.52   10.5   3.4    2.4  2  FYVE_2        FYVE-type zinc finger


Domain annotation for each model (and alignments):
>> SPX  SPX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.2   1.8e-11     3e-08       1      59 [.       1      64 [.       1      89 [. 0.74
   2 !   96.5   2.8   1.9e-30     3e-27     168     380 ..     132     301 ..     107     305 .. 0.92

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 1.8e-11
         SPX  1 MKFakeLeenlv.....pEWrdaYldYkqLKKlIkkvqreleslgleaetlrellnrpedskkk 59
                MKFa+e+ + l+       W + ++ Y qLKK++kk+q el+ +g+  ++l++   + e++  k
  KHJ35164.1  1 MKFAHEFRSVLEnedfpDRWVASAVAYCQLKKCLKKMQSELQISGSNLSDLKQKFTSDENEFPK 64
                ************9999777***********************6666666655555555444433 PP

  == domain 2  score: 96.5 bits;  conditional E-value: 1.9e-30
         SPX 168 eeksersyetrplraekeFferLdseLnkvetFykakeeefterlesLrkqleal.rprrikeaeerksdlyrwreifglksveaqvfessreldrgel 265
                 ++ +  +  ++ l  + eFf+ L +++ +++ +  ++++ + +r+e+L+  +++l +p++ +     ++d+yrwr+ f+l+ +ea++f+s +eld    
  KHJ35164.1 132 TDGEFPQQMETSLIFNVEFFNILKEDVASLDLLHLQEQKALGRRIEALSIAIATLtKPSKFR-----RTDMYRWRQLFELY-LEAGIFFSRHELDC--- 221
                 4555566666788899**********************************************.....9*************.**************... PP

         SPX 266 seeardkevseelekngwikptksklekkrneralekvkpektlkafldsvrrdylrkenrvklkkakkklkkafvelYrgLelLKsYqeLNrtAFrKI 364
                                               ++ ++  +   k+l++f+++  r++l +   +k+ ++kk + + f+  + +L+++ ++qe+N++A++KI
  KHJ35164.1 222 ------------------------------GTHDSRTA--AKQLRWFQNQLSRQELEN--LFKIPASKK-ALDHFISINLSLLQILKFQEINQKAVSKI 285
                 ..............................88999999..99****************..*********.9999************************* PP

         SPX 365 lKKfDKvtaltaskry 380
                 lKKf K+t+l++ + +
  KHJ35164.1 286 LKKFAKRTKLNVGNLF 301
                 ***********98877 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   8.9   5.5e-10   8.9e-07       2      47 ..     336     381 ..     335     383 .. 0.94

  Alignments for each domain:
  == domain 1  score: 28.7 bits;  conditional E-value: 5.5e-10
                 GSB-TTTSSSBS-EEETTEEEEEE-HHHHHHHHH.TT-B-TTT--B- CS
  zf-C3HC4_3   2 deeCviClerprnvvllpCgHlvlCeeCaekllk.rkkkCpiCrrpi 47 
                 d +C+iCl    + + ++C+H+ +C +Ca +l++ + + Cp+Cr+++
  KHJ35164.1 336 DYLCPICLAIVWQPIRMKCRHF-FCVQCAVTLQQkKIRLCPLCRENV 381
                 679*******************.*********988999******987 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0  10.6   2.2e-08   3.6e-05       3      44 .]     339     378 ..     337     378 .. 0.78

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 2.2e-08
   zf-RING_2   3 CpICleelssadsvlllpCgHvfhreClerwlrssst.CPlCr 44 
                 CpICl  +    ++++++C+H+f+ +C+ ++ +++++ CPlCr
  KHJ35164.1 339 CPICLAIV---WQPIRMKCRHFFCVQCAVTLQQKKIRlCPLCR 378
                 ****9433...3444566*********9996677777*****9 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2       3.5   5.6e+03      21      32 ..      28      41 ..      25      44 .. 0.69
   2 !   25.1   9.6   8.6e-09   1.4e-05       1      42 []     339     377 ..     339     377 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3.5
  zf-C3HC4_4 21 Cl..sCisslqkep 32
                C+  +C++++q e 
  KHJ35164.1 28 CQlkKCLKKMQSEL 41
                54337999988876 PP

  == domain 2  score: 25.1 bits;  conditional E-value: 8.6e-09
  zf-C3HC4_4   1 CPiCldYLekPvsleCGhsfClsCisslqkepdgeqllCplC 42 
                 CPiCl+   +P+ ++C h fC++C   lq+++     lCplC
  KHJ35164.1 339 CPICLAIVWQPIRMKCRHFFCVQCAVTLQQKKIR---LCPLC 377
                 ******************************9955...7***9 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       3.4   5.6e+03      12      31 ..     106     126 ..     101     129 .. 0.69
   2 !   22.6  10.9   4.2e-08   6.8e-05       2      40 .]     339     377 ..     338     377 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3.4
  zf-C3HC4_2  12 psvvtpCgHvfCqkCilr.sL 31 
                 p+++  C+    ++C l  sL
  KHJ35164.1 106 PITTEYCQELVPENCYLNnSL 126
                 677778887777788776455 PP

  == domain 2  score: 22.6 bits;  conditional E-value: 4.2e-08
  zf-C3HC4_2   2 CpiCldmlkdpsvvtpCgHvfCqkCilrsLeekn..eCPlC 40 
                 CpiCl+   +p    +C H fC +C  + L++k+   CPlC
  KHJ35164.1 339 CPICLAIVWQP-IRMKCRHFFCVQCAVT-LQQKKirLCPLC 377
                 ***********.6679***********9.78888789**** PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1       2.6   4.3e+03      23      31 ..      31      39 ..      27      45 .. 0.78
   2 !   23.4  10.2   2.5e-08     4e-05       1      41 []     339     377 ..     339     377 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.6
                CHHHHHHHH CS
    zf-C3HC4 23 skCirkilk 31
                +kC++k+++
  KHJ35164.1 31 KKCLKKMQS 39
                589999876 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 2.5e-08
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilksrkkvkCPlC 41 
                 CpiCl  + +p   ++C+H fC +C +++++ +k + CPlC
  KHJ35164.1 339 CPICLAIVWQPI-RMKCRHFFCVQCAVTLQQ-KKIRLCPLC 377
                 ************.******************.88899**** PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       4.6   7.6e+03      22      26 ..      31      38 ..      27      50 .. 0.61
   2 !   18.2   4.6   1.1e-06    0.0018       1      36 [.     339     372 ..     339     375 .. 0.75
   3 ?   -1.5   0.1       1.6   2.6e+03       1       6 [.     374     379 ..     374     382 .. 0.87

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 4.6
  zf-RING_UBOX 22 reCl...w 26
                  ++Cl   +
    KHJ35164.1 31 KKCLkkmQ 38
                  68994321 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 1.1e-06
  zf-RING_UBOX   1 CpIClelftdPlv.lpCGHtFCreClwelskslegaf 36 
                   CpICl    +P + ++C H FC +C    + ++++ +
    KHJ35164.1 339 CPICLAIVWQP-IrMKCRHFFCVQCA--VTLQQKKIR 372
                   *****9999**.4357*********9..344444444 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.6
  zf-RING_UBOX   1 CpICle 6  
                   Cp C+e
    KHJ35164.1 374 CPLCRE 379
                   ****98 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2         3     5e+03       4      10 ..      32      38 ..      27      43 .. 0.54
   2 ?   -0.7   0.2      0.86   1.4e+03      37      42 ..     337     342 ..     333     344 .. 0.80
   3 !   16.6  10.4   3.5e-06    0.0057       2      43 ..     339     378 ..     338     379 .. 0.90

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 3
   zf-RING_5  4 kCfekls 10
                kC +k++
  KHJ35164.1 32 KCLKKMQ 38
                5655553 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.86
   zf-RING_5  37 avCpiC 42 
                 + CpiC
  KHJ35164.1 337 YLCPIC 342
                 579999 PP

  == domain 3  score: 16.6 bits;  conditional E-value: 3.5e-06
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll.ekeavCpiCr 43 
                 C++C   +    +++ ++C H+fC +C+ +l+ +k + Cp+Cr
  KHJ35164.1 339 CPICLAIV---WQPIRMKCRHFFCVQCAVTLQqKKIRLCPLCR 378
                 77777777...78999****************999*******9 PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.2      0.21   3.4e+02      32      39 ..     338     345 ..     332     352 .. 0.76
   2 ?   11.8  10.0    0.0001      0.17       1      40 [.     339     381 ..     339     387 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.21
  Prok-RING_4  32 sCPlCqrr 39 
                   CP+C   
   KHJ35164.1 338 LCPICLAI 345
                  5****765 PP

  == domain 2  score: 11.8 bits;  conditional E-value: 0.0001
  Prok-RING_4   1 CvlCgeqekkailepCgHlvCkeCfdskdls...sCPlCqrri 40 
                  C +C     ++i   C H +C +C    + +    CPlC++++
   KHJ35164.1 339 CPICLAIVWQPIRMKCRHFFCVQCAVTLQQKkirLCPLCRENV 381
                  667777777788889*********76665555559*****987 PP

>> zf-RING_4  RING/Ubox like zinc-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.1       2.7   4.4e+03      38      43 ..     337     342 ..     329     344 .. 0.74
   2 ?   11.9   4.4   9.2e-05      0.15      19      45 ..     353     379 ..     350     381 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 2.7
   zf-RING_4  38 grCPaC 43 
                   CP C
  KHJ35164.1 337 YLCPIC 342
                 568877 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 9.2e-05
   zf-RING_4  19 eCgyqiClfCyhrileeeegrCPaCre 45 
                 +C++ +C+ C   +++++   CP Cre
  KHJ35164.1 353 KCRHFFCVQCAVTLQQKKIRLCPLCRE 379
                 7*************************8 PP

>> FYVE_2  FYVE-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.5       1.5   2.5e+03      72      95 ..     107     130 ..      29     133 .. 0.58
   2 ?   10.5   3.4   0.00032      0.52      75     106 ..     352     383 ..     321     389 .. 0.86

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 1.5
      FYVE_2  72 rqCldCklnvCkkCsvenkkekvw 95 
                  + + C+  v ++C  +n  ++ w
  KHJ35164.1 107 ITTEYCQELVPENCYLNNSLKRSW 130
                 334556666666666666655555 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00032
      FYVE_2  75 ldCklnvCkkCsvenkkekvwlCkiCseaRev 106
                  +C+ + C +C+v+ +++k+ lC  C+e+ ++
  KHJ35164.1 352 MKCRHFFCVQCAVTLQQKKIRLCPLCRENVVM 383
                 58*************************98665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       916  (0.0510904); expected 358.6 (0.02)
Passed bias filter:                      466  (0.0259914); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.48
# Mc/sec: 2755.43
//
Query:       KHJ35165.1  [L=563]
Description: putative chaperone protein dnak [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      1e-73  248.5   0.4    1.6e-73  247.9   0.4    1.3  1  HSP70     Hsp70 protein
    5.2e-08   32.1   0.1    9.1e-08   31.3   0.1    1.5  1  MreB_Mbl  MreB/Mbl protein


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.9   0.4   1.8e-77   1.6e-73       1     440 [.      16     478 ..      16     486 .. 0.87

  Alignments for each domain:
  == domain 1  score: 247.9 bits;  conditional E-value: 1.8e-77
                 EEEEEEXSSEEEEEEEE.TTEEEEEXXTTSXSSEESEEEEXTTSEEETHHHHHCTTTTGGGEEEXGGGTTTXBTTSHHHHHHHTTXSSEEEEETTSBEE CS
       HSP70   1 viGiDLGttnsvvavme.ggkievianeegnrttPsvvaFtkkerlvGeaAkrqavtnpkntvfsvKrliGrkfsdpevqkeikelpykvvkkengkav 98 
                 viGi  G+ ns +a  + +gk+eviane g+r  Ps++++ + e + G++Ak+q ++n++ntv+ ++ ++G ++++     + +  +y  ++++     
  KHJ35165.1  16 VIGISFGNSNSSIAYTNsEGKAEVIANEDGDRQIPSILSYVDGEEYYGQQAKQQLIRNSSNTVAYFRDFLGLDYKNI-DPTHCQASAYPQEHESITTFR 113
                 79************87626799****************************************************983.334455566666666666667 PP

                 EEEEETTE..EEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCCSS..SCEEEEEEEE CS
       HSP70  99 veveaage..kftpeqisamvLkklketaeaylgkkvtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldkkd..kernvlvyDl 193
                 ++ +  +e    + ++i ++ +++l + a +y+gk+v+ avitvP+ fnd+qR    + +k AGL vl ++ ep Aa laY  + +   +++nvlv D+
  KHJ35165.1 114 IRETDSDEesIISISEIITRQIRRLVKSATDYIGKPVDAAVITVPTNFNDQQRDCLVECAKNAGLMVLQLIHEPVAALLAYDSQPDAklTDKNVLVADF 212
                 76665555578999*******************************************************************987666679********* PP

                 XSSXEEEEEEEEETTEEEEEEEEEETTXSHHHHHHHHHHHHHHHHHHHHSXXGG..GSHHHHHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTTEEEE CS
       HSP70 194 GggtfdvSilelekGvfevkaTagDthlGGedfDealvehlveefkkkegidls..kdkkalqrlkeaaekaKkeLSsskqteinleietvdedgkdls 290
                 Gg   d+S+++   G++ ++    D+++ G + D+al++h+++ef k++g dl   +d++   +lk + e  Kk+LS    +++++++e++ + g d+s
  KHJ35165.1 213 GGTRSDISVVASRGGIYTILTSINDKNFAGVNLDQALINHFASEFVKRNGKDLVplDDPRSKAKLKLESEATKKALSI--GNNASFSVESLLS-GIDFS 308
                 ****************************************************964489********************..899**********.***** PP

                 EEEEHHHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTT..C.......HHBSSSHTTTHHHHHHHHHHHHHCTC.. CS
       HSP70 291 eklsRakfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfg..k.......epsktvnpDeavaiGAAvqagvlsge.. 378
                 ++++R ++e+++++++e   + +  a+++++l+  +idev+l GG +  P++   ++++f   k        + +++np e   +GAA+qa++l+    
  KHJ35165.1 309 TTINRYRYETIARKVFEGFNQLIITAIANSGLDILDIDEVILSGGISHTPRIALNLQKIFTssKiqilapsTLPTAINPSELQVRGAAIQANLLKNYnl 407
                 **********************************************************998533333322234589******************98444 PP

                 ..........GCSHCCEEEEBESS-EEEEETTTEEEEEESTTCBSSEEEEEEEEESSTTSSSEEEEEEESSS CS
       HSP70 379 ..........eevkdllllDvtpLslgietlggvmtkliernttiptkksqvfstaadnqtaveievlqger 440
                            +++  l + v  Ls++ + + gv+  +i + t +p+++s  ++t +++  +v i++++ge 
  KHJ35165.1 408 eeiklymnpsLSTSTYLSKAVGVLSISDDCNKGVFIPIIMEKTSVPARRSILITTPREG-GDVLIKIVEGES 478
                 44444444434444445566777777778888999999999999999998777665544.578888888885 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.3   0.1     1e-11   9.1e-08      67     192 ..     124     257 ..     113     369 .. 0.84

  Alignments for each domain:
  == domain 1  score: 31.3 bits;  conditional E-value: 1e-11
                 EESSHHHHHHHHHHHHHHHHTSS-SS--EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT--..TTSS.S-EEEEEE-SS-EEEEEE CS
    MreB_Mbl  67 viadlevaeellkyfikkvkkkkslskprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglp..veep.sgnmvvdiGggttevavi 162
                 +i+  e++ + +++++k +++    + +  vi+vP++ ++ +r  + e ak+aG    +li ep+aA +  + +   + + +  +v d Gg  ++++v+
  KHJ35165.1 124 IISISEIITRQIRRLVKSATDYIGKPVDAAVITVPTNFNDQQRDCLVECAKNAGLMVLQLIHEPVAALLAYDSQpdAKLTdKNVLVADFGGTRSDISVV 222
                 5666678889999999999999999999***************************************88776541144431456899*********998 PP

                 .ETTEEEE.EEEE...S-SHHHHHHHHHHHHHHHH CS
    MreB_Mbl 163 .slggivt.sksv...rvaGdeldeaiikyirkky 192
                  s ggi t  +s+     aG +ld+a+i++  +++
  KHJ35165.1 223 aSRGGIYTiLTSIndkNFAGVNLDQALINHFASEF 257
                 466777542455533369**********9887766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (563 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       619  (0.0345251); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 3913.32
//
Query:       KHJ35166.1  [L=1474]
Description: putative wd repeat-containing protein mip1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-63  213.1   0.0    3.6e-63  211.9   0.0    1.7  1  Raptor_N     Raptor N-terminal CASPase like domain
    1.4e-06   28.9   0.9        2.7    9.0   0.0    6.3  6  WD40         WD domain, G-beta repeat
      8e-06   25.8   0.9      0.011   15.8   0.1    3.5  4  BBS2_Mid     Ciliary BBSome complex subunit 2, middle region
     0.0016   18.7   0.1        0.9    9.9   0.1    3.9  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
      0.004   17.2   0.2       0.16   12.0   0.2    3.0  3  Cnd1         non-SMC mitotic condensation complex subunit 1
  ------ inclusion threshold ------
      0.014   15.8   0.0       0.44   11.0   0.0    3.1  4  HEAT_2       HEAT repeats
      0.022   13.4   0.1      0.058   12.0   0.1    1.6  2  Nup160       Nucleoporin Nup120/160


Domain annotation for each model (and alignments):
>> Raptor_N  Raptor N-terminal CASPase like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  211.9   0.0   1.4e-66   3.6e-63       1     146 [.     219     369 ..     219     370 .. 0.97

  Alignments for each domain:
  == domain 1  score: 211.9 bits;  conditional E-value: 1.4e-66
    Raptor_N   1 lktksvilvlclnigvdppdvvktkpcarleawidpsse.....leeiaknlqdqyeslqlrarykqlldptvedvkklcqslrrnakdervlfHYnGh 94 
                 lkt s++l +clnigv+ppd ++t+p a leaw dp+++     le+i+k+lq+qye+l++r+rykq+ldpt+e+++++c slrrnakder+lfHYnGh
  KHJ35166.1 219 LKTISAALAVCLNIGVEPPDQLRTNPGALLEAWEDPMCHpvqksLENIGKSLQEQYETLSIRTRYKQYLDPTIEETRRFCLSLRRNAKDERILFHYNGH 317
                 599***********************************5466777****************************************************** PP

    Raptor_N  95 gvprptengeiwvfdksytqyiplslaelqewlgspsiyifDCsnAglilea 146
                 gvp+pt +geiwvf+k+ytqyip+sl++lq+wl++p+iy++DCs Ag+il +
  KHJ35166.1 318 GVPKPTPSGEIWVFNKNYTQYIPVSLYDLQTWLQAPTIYVWDCSGAGNILCN 369
                 *************************************************965 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.99   2.5e+03      20      38 .]    1158    1176 ..    1142    1176 .. 0.79
   2 !    9.0   0.0    0.0011       2.7      12      37 ..    1194    1222 ..    1181    1223 .. 0.78
   3 ?    5.0   0.0     0.019        50      13      38 .]    1294    1320 ..    1282    1320 .. 0.72
   4 ?    5.7   0.1     0.012        30      24      38 .]    1353    1368 ..    1334    1368 .. 0.72
   5 ?   -0.2   0.0      0.88   2.2e+03       3      38 .]    1374    1410 ..    1372    1410 .. 0.67
   6 ?   -1.7   0.0       2.6   6.6e+03      11      36 ..    1432    1458 ..    1424    1459 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.99
                  TTSSEEEEEETTSEEEEEE CS
        WD40   20 pdgawlasGsdDgtvriWd 38  
                  +  + la ++d  t+ iW+
  KHJ35166.1 1158 QFEDHLAISDDGDTISIWN 1176
                  4566788889999*****8 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0011
                  S.EEEEE..EETTSSEEEEEETTSEEEEE CS
        WD40   12 s.vtsla..fspdgawlasGsdDgtvriW 37  
                  s +++++  + +d+a++++Gs Dg +r++
  KHJ35166.1 1194 SkINDIRfiNEDDQALVMTGSSDGVIRVY 1222
                  368888877888999999**99*****98 PP

  == domain 3  score: 5.0 bits;  conditional E-value: 0.019
                  EEEEE.EETTSSEEEEEETTSEEEEEE CS
        WD40   13 vtsla.fspdgawlasGsdDgtvriWd 38  
                  +tsl   +  g+ +++G  Dg +ri+d
  KHJ35166.1 1294 ITSLTsDQMTGNIFVAGFADGAIRIFD 1320
                  6666544445666789*88******98 PP

  == domain 4  score: 5.7 bits;  conditional E-value: 0.012
                  E.EEEEETTSEEEEEE CS
        WD40   24 w.lasGsdDgtvriWd 38  
                    l+++s++g+vr+Wd
  KHJ35166.1 1353 ReLVAASRNGKVRFWD 1368
                  35778999*******9 PP

  == domain 5  score: -0.2 bits;  conditional E-value: 0.88
                  EEEEEESSSSE.EEEEEETTSSEEEEEETTSEEEEEE CS
        WD40    3 clrtltGHssv.tslafspdgawlasGsdDgtvriWd 38  
                  +lrt+++ + v +  +++ + + ++ G+ ++tv++++
  KHJ35166.1 1374 PLRTFRTTNQVlRTASVHEHFPVFSIGTGNHTVKVFN 1410
                  677777666654555555555777789559***9987 PP

  == domain 6  score: -1.7 bits;  conditional E-value: 2.6
                  SSEEEEEEETTSSEEEEEE.TTSEEEE CS
        WD40   11 ssvtslafspdgawlasGs.dDgtvri 36  
                  +++ +  f+p+  +la++  +D +v +
  KHJ35166.1 1432 NPIFATTFHPHRMMLACAArRDYHVNM 1458
                  457777799999999977536999865 PP

>> BBS2_Mid  Ciliary BBSome complex subunit 2, middle region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       5.3   1.4e+04      68      80 ..    1110    1122 ..    1108    1132 .. 0.72
   2 !    6.0   0.0    0.0048        12       8      52 ..    1203    1247 ..    1198    1253 .. 0.78
   3 !   15.8   0.1   4.3e-06     0.011      14     106 ..    1262    1365 ..    1252    1370 .. 0.75
   4 !   10.1   0.0   0.00024      0.62       5      66 ..    1345    1410 ..    1342    1416 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 5.3
    BBS2_Mid   68 kerlWrvksknev 80  
                  +erlWr + ++++
  KHJ35166.1 1110 NERLWRCSRNEAI 1122
                  6899999776654 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.0048
    BBS2_Mid    8 dgdgeneLvvgsddfeirvfkeeelvaeitetekvvslarleker 52  
                  ++d+++ ++ gs d  irv+++ +  ++++ +++  +l++l +++
  KHJ35166.1 1203 NEDDQALVMTGSSDGVIRVYRNYDNDKKVELASAWRALTNLVPSN 1247
                  4455566678************99999999999998888887665 PP

  == domain 3  score: 15.8 bits;  conditional E-value: 4.3e-06
    BBS2_Mid   14 eLvvgsddfeirvfkee..elvaeitet..ekvvsla..rlekerfayaleNGtvgvyekker.....lWrvksknevvalaaydingdgtkelivg 99  
                   ++v+ d   i+v++      +aei+ +  + ++sl+  +++++ f+++++ G + +++ +++     + r k ++  v l+++ ++  g++el+ +
  KHJ35166.1 1262 RILVAGDVKVIKVWSAAseLCLAEINARsgSCITSLTsdQMTGNIFVAGFADGAIRIFDARNKpqeamVKRWKDDTDNVWLKCVHMQRGGQRELVAA 1358
                  577777777888887542156777776511567888744588888*************987763333356788899999999*****99******** PP

    BBS2_Mid  100 wsnGkld 106 
                   +nGk+ 
  KHJ35166.1 1359 SRNGKVR 1365
                  *****86 PP

  == domain 4  score: 10.1 bits;  conditional E-value: 0.00024
    BBS2_Mid    5 advdgdgeneLvvgsddfeirvf..keeelvaeitetekvvslarleker..fayaleNGtvgvye 66  
                  + +++ g++eLv++s + ++r +  + ++ ++++++t++v   a+++++   f ++  N tv+v++
  KHJ35166.1 1345 VHMQRGGQRELVAASRNGKVRFWdiRMDKPLRTFRTTNQVLRTASVHEHFpvFSIGTGNHTVKVFN 1410
                  5677889**************98335789******************9987789999999****97 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.13   3.4e+02      32      70 ..    1186    1227 ..    1154    1258 .. 0.67
   2 ?    2.5   0.1      0.07   1.8e+02      43      88 ..    1253    1298 ..    1206    1302 .. 0.71
   3 !    9.9   0.1   0.00035       0.9      28      70 ..    1273    1324 ..    1256    1346 .. 0.81
   4 ?    1.8   0.0      0.12     3e+02      51      81 ..    1353    1383 ..    1326    1391 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.13
  ANAPC4_WD40   32 l.eedkedsevrsLaW.kpdgklLa.vaysdgevrlldaesg 70  
                   + + + e+s+++++++ ++d++ L+  + sdg +r++  ++ 
   KHJ35166.1 1186 FsNGNPENSKINDIRFiNEDDQALVmTGSSDGVIRVYRNYDN 1227
                   333455778999999854556665516889999999987754 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.07
  ANAPC4_WD40   43 sLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclg 88  
                    L W++ +  + va +   +++ +a s+ ++ ++++ s +++t+l+
   KHJ35166.1 1253 VLDWQQVNGRILVAGDVKVIKVWSAASELCLAEINARSGSCITSLT 1298
                   58998755555566677789******************99999885 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00035
  ANAPC4_WD40   28 rvwtl........eedkedsevrsLaW.kpdgklLavaysdgevrlldaesg 70  
                   +vw++         ++ ++s ++sL   ++ g++++ +++dg++r++da ++
   KHJ35166.1 1273 KVWSAaselclaeINARSGSCITSLTSdQMTGNIFVAGFADGAIRIFDARNK 1324
                   6677677777766678899999999763789******************986 PP

  == domain 4  score: 1.8 bits;  conditional E-value: 0.12
  ANAPC4_WD40   51 klLavaysdgevrlldaesgkvvhslsvkse 81  
                   + L+ a  +g+vr+ d+   k +++++++++
   KHJ35166.1 1353 RELVAASRNGKVRFWDIRMDKPLRTFRTTNQ 1383
                   45899999**************999988765 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.1   7.9e-05       0.2      34     129 ..     740     842 ..     724     846 .. 0.62
   2 !   12.0   0.2   6.3e-05      0.16      18      96 ..     766     850 ..     761     915 .. 0.71
   3 ?   -0.6   0.0      0.47   1.2e+03      31      49 ..     916     934 ..     898     974 .. 0.55

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 7.9e-05
        Cnd1  34 dpyVRktaaivvakLilnd.mvkekg....flselaklleDenprVvanalaalteisek..senaiynllpdiisklsdalnecsewgqitilefLls 125
                 +p  R+ a i++++L +     k++g     l +la l++D+ ++V+a  l+a+t  + +   +++++++  +i   + +  ++ +   ++++l +L++
  KHJ35166.1 740 NPLLRQWACICISQLWNDFpDAKWRGirenTLVKLAFLIRDNCAEVRAAMLYAMTLFLGMaeLTDEVVRIEENITWTIIEMVKDGNAMVRKEVLVYLSK 838
                 677777777777777433212333332223566677777777777777777777777777432356666666666666666666677777777777777 PP

        Cnd1 126 yipk 129
                 +i +
  KHJ35166.1 839 FIHR 842
                 6654 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 6.3e-05
        Cnd1  18 lveylvepLrkrLkDedpyVRktaaivvakL.....ilndmvkekg.flselaklleDenprVvanalaalteiseksenaiynl 96 
                 + e+++ +L   ++D+++ VR   +++++       ++ ++v+ ++ +  ++ ++++D n++V++ +l  l++  ++ en ++  
  KHJ35166.1 766 IRENTLVKLAFLIRDNCAEVRAAMLYAMTLFlgmaeLTDEVVRIEEnITWTIIEMVKDGNAMVRKEVLVYLSKFIHRYENRFFVA 850
                 5677888899999********98887776555777777777776665999**********************9999955555443 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.47
        Cnd1  31 kDedpyVRktaaivvakLi 49 
                  D++p V+++a ++v  ++
  KHJ35166.1 916 VDPHPEVQQNASLIVDYVY 934
                 3555555555555554443 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0       2.1   5.4e+03      30      51 ..     594     615 ..     590     648 .. 0.73
   2 ?    4.5   0.0     0.018        46       8      56 ..     735     794 ..     731     807 .. 0.76
   3 ?   11.0   0.0   0.00017      0.44       5      58 ..     774     839 ..     770     862 .. 0.77
   4 ?   -2.9   0.0       3.8   9.6e+03      42      51 ..     917     926 ..     911     928 .. 0.59

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 2.1
      HEAT_2  30 pealpaLvellededpavRraa 51 
                 pe lp+++++l ++  +vR+ +
  KHJ35166.1 594 PEQLPIVLQVLLSQQHRVRALV 615
                 5556666666666666666544 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.018
      HEAT_2   8 lendpdpevrraairaLgri..gnpea......lpaLvell...ededpavRraaaeaLg 56 
                 l+n  +p +r+ a++++ ++  + p+a       ++Lv+l+   +d  ++vR+a   a+ 
  KHJ35166.1 735 LQNLDNPLLRQWACICISQLwnDFPDAkwrgirENTLVKLAfliRDNCAEVRAAMLYAMT 794
                 56778999**********652234666667788888888776679999999999988875 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 0.00017
      HEAT_2   5 lqalendpdpevrraairaLg.........rignp......ealpaLvellededpavRraaaeaLgai 58 
                 l++l +d + evr+a + a+          +   +       + ++++e+++d +++vR+++  +L+++
  KHJ35166.1 774 LAFLIRDNCAEVRAAMLYAMTlflgmaeltD---EvvrieeNITWTIIEMVKDGNAMVRKEVLVYLSKF 839
                 567889***************8775554330...245444478***********************987 PP

  == domain 4  score: -2.9 bits;  conditional E-value: 3.8
      HEAT_2  42 dedpavRraa 51 
                 d++p+v+++a
  KHJ35166.1 917 DPHPEVQQNA 926
                 5566666555 PP

>> Nup160  Nucleoporin Nup120/160
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       1.6     4e+03     222     252 ..    1198    1230 ..    1179    1236 .. 0.72
   2 ?   12.0   0.1   2.3e-05     0.058     221     261 ..    1340    1383 ..    1322    1395 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 1.6
                  ET......TTTEEEEEETT-EEEEE.ETTTTEE CS
      Nup160  222 avavvei.gqtylfalsrdgkLrvW.nlltgkc 252 
                   ++++++ +q+++++ s+dg++rv  n++++k 
  KHJ35166.1 1198 DIRFINEdDQALVMTGSSDGVIRVYrNYDNDKK 1230
                  566778889999999999999999766666665 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 2.3e-05
                  EET........TTTEEEEEETT-EEEEEETTTTEEEEEEE--.- CS
      Nup160  221 vavavvei...gqtylfalsrdgkLrvWnlltgkclatidllrd 261 
                  v  ++v++   gq  l+a+sr+gk+r W+++ +k+l+t+ ++++
  KHJ35166.1 1340 VWLKCVHMqrgGQRELVAASRNGKVRFWDIRMDKPLRTFRTTNQ 1383
                  5567888889999*************************666523 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1474 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       585  (0.0326287); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.92u 0.29s 00:00:01.21 Elapsed: 00:00:00.48
# Mc/sec: 9218.33
//
Query:       KHJ35167.1  [L=1460]
Description: putative kelch-domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.3e-29  100.4  12.8    8.5e-08   32.0   0.2    6.8  6  Kelch_5     Kelch motif
    6.2e-29   99.8  11.2    1.3e-05   25.1   0.0    6.5  6  Kelch_4     Galactose oxidase, central domain
    1.5e-28   98.1   8.9    8.8e-11   41.7   0.8    6.6  6  Kelch_6     Kelch motif
    5.4e-26   89.9  13.6    4.7e-10   38.9   0.3    6.5  6  Kelch_1     Kelch motif
    1.3e-22   79.6  18.0    0.00043   20.5   0.2    6.8  7  Kelch_3     Galactose oxidase, central domain
    4.1e-21   74.1   7.3    5.3e-07   29.4   0.3    6.9  6  Kelch_2     Kelch motif
  ------ inclusion threshold ------
       0.16   12.3   0.2       0.54   10.6   0.2    1.9  1  DUF4160     Domain of unknown function (DUF4160)
        1.3    8.9  19.2       0.34   10.7   0.8    5.1  4  CCDC92      Coiled-coil domain of unknown function


Domain annotation for each model (and alignments):
>> Kelch_5  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.6   0.2   9.8e-05      0.22       2      35 ..     126     161 ..     125     163 .. 0.74
   2 ?    5.0   0.0     0.011        24       2      37 ..     181     218 ..     180     222 .. 0.77
   3 !   20.9   0.1   1.2e-07   0.00026       2      35 ..     235     266 ..     235     278 .. 0.77
   4 !   32.0   0.2   3.8e-11   8.5e-08       1      39 [.     297     333 ..     297     334 .. 0.95
   5 !   20.4   0.0   1.7e-07   0.00038       1      31 [.     347     374 ..     347     380 .. 0.88
   6 !   13.3   0.0   2.7e-05     0.061       2      22 ..     399     419 ..     398     420 .. 0.97

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 9.8e-05
     Kelch_5   2 PppRaghcavtvsek...iYvyGGkvgrdgsvs.ddvy 35 
                 P pR+g+++  v +k   iY++GG v  +gs+  +d++
  KHJ35167.1 126 PFPRYGAAVNSVASKdggIYLMGGLV--NGSSVkGDLW 161
                 99*******976544455********..4444337887 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.011
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvg.rdgsvsd.dvyvL 37 
                 P+pR gh++  v++  +vyGG +   d++v d  +y L
  KHJ35167.1 181 PSPRVGHASLLVGNAFIVYGGDTKmDDSDVLDeTLYLL 218
                 9********************77556666666455555 PP

  == domain 3  score: 20.9 bits;  conditional E-value: 1.2e-07
     Kelch_5   2 PppRaghcavtvsekiYvyGGkvgrdgsvsddvy 35 
                 P++R+gh+  ++++kiYv+GG v  +g + +d+ 
  KHJ35167.1 235 PAGRYGHSLNILGSKIYVFGGQV--EGYFMNDLV 266
                 999********************..444447665 PP

  == domain 4  score: 32.0 bits;  conditional E-value: 3.8e-11
     Kelch_5   1 iPppRaghcavtvsekiYvyGGkvgrdgsvsddvyvLdl 39 
                 iP++R++h++vt++ek+Y++GG +g   + ++dv+ +d+
  KHJ35167.1 297 IPSARTNHSVVTYNEKLYLFGGTNG--LQWYNDVWCYDP 333
                 7***********************6..********9996 PP

  == domain 5  score: 20.4 bits;  conditional E-value: 1.7e-07
     Kelch_5   1 iPppRaghcavtvsekiYvyGGkvgrdgsvs 31 
                 iP+pR gh+a++v++ +Yv+GG+    +++s
  KHJ35167.1 347 IPVPREGHAAAIVDDVMYVFGGRA---DDGS 374
                 7*********************98...4444 PP

  == domain 6  score: 13.3 bits;  conditional E-value: 2.7e-05
     Kelch_5   2 PppRaghcavtvsekiYvyGG 22 
                 P++R+ghc+ +++ +i v+GG
  KHJ35167.1 399 PSARSGHCMTAHGKQIVVIGG 419
                 99******************9 PP

>> Kelch_4  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.7   0.1    0.0033       7.3       1      32 [.     128     161 ..     128     162 .. 0.87
   2 !   18.7   0.0   5.7e-07    0.0013       1      48 [.     183     233 ..     183     236 .. 0.84
   3 !   25.1   0.0   5.9e-09   1.3e-05       1      45 [.     237     285 ..     237     295 .. 0.84
   4 !   24.0   0.4   1.2e-08   2.8e-05       1      43 [.     300     340 ..     300     348 .. 0.89
   5 !   19.4   0.0   3.5e-07   0.00079       1      49 []     350     400 ..     350     400 .. 0.90
   6 !    7.9   0.0    0.0014       3.1       1      22 [.     401     421 ..     401     424 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0033
     Kelch_4   1 pRaghsatsi..pdgtiylfGGrgedgtllndly 32 
                 pR g+++ s+   dg iyl GG  +  ++ +dl+
  KHJ35167.1 128 PRYGAAVNSVasKDGGIYLMGGLVNGSSVKGDLW 161
                 89999999997788*********99889999988 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 5.7e-07
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedg...tllndl.ylldlstntWrrl.gslP 48 
                 pR+gh++  ++ + ++++GG +  +    +l+++ yll++st++W+r  ++ P
  KHJ35167.1 183 PRVGHASLLVG-NAFIVYGGDTK-MddsDVLDETlYLLNTSTRQWSRAiPAGP 233
                 9*********7.66677999887.4488******************9874443 PP

  == domain 3  score: 25.1 bits;  conditional E-value: 5.9e-09
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedgtllndlylldl.....stntWrrl.g 45 
                 +R ghs+  ++  +iy+fGG+ e g ++ndl ++dl     +tn+W+ l +
  KHJ35167.1 237 GRYGHSLNILG-SKIYVFGGQVE-GYFMNDLVAFDLnllqvPTNRWEILiK 285
                 599*******7.7**********.58********7777777*****97763 PP

  == domain 4  score: 24.0 bits;  conditional E-value: 1.2e-08
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedgtllndlylldlstntWrr 43 
                 +R +hs++   + ++ylfGG ++  + +nd++ +d   n+W+ 
  KHJ35167.1 300 ARTNHSVVTY-NEKLYLFGGTNGL-QWYNDVWCYDPIPNSWTL 340
                 6899997766.68***********.9***************86 PP

  == domain 5  score: 19.4 bits;  conditional E-value: 3.5e-07
     Kelch_4   1 pRaghsatsipdgtiylfGGrgedgtllndlylldlstntW...rrlgslPs 49 
                 pR gh+a  + d+  y+fGGr +dg+ l+dl ++ +++++W   + +g++Ps
  KHJ35167.1 350 PREGHAAAIV-DDVMYVFGGRADDGSDLGDLAAFRITSRRWytfQNMGQSPS 400
                 7789999999.69****************************77777788875 PP

  == domain 6  score: 7.9 bits;  conditional E-value: 0.0014
     Kelch_4   1 pRaghsatsipdgtiylfGGrg 22 
                 +R gh++t+ +   i+++GG+ 
  KHJ35167.1 401 ARSGHCMTAHG-KQIVVIGGEP 421
                 7*********7.79999***96 PP

>> Kelch_6  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.1    0.0001      0.23       4      31 ..     134     161 ..     132     163 .. 0.86
   2 !    7.2   0.0    0.0028       6.3       1      42 [.     183     227 ..     183     235 .. 0.86
   3 !   20.0   0.0   2.8e-07   0.00062       2      41 ..     238     281 ..     238     283 .. 0.91
   4 !   41.7   0.8   3.9e-14   8.8e-11       1      50 []     300     351 ..     300     351 .. 0.89
   5 !   13.1   0.0   3.9e-05     0.088       2      45 ..     351     394 ..     350     397 .. 0.91
   6 ?    3.8   0.0     0.035        78       1      20 [.     401     420 ..     401     426 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.0001
     Kelch_6   4 ghslvsvggkiYifGGytdsspylnkvw 31 
                  +s++s +g iY++GG++++s+   ++w
  KHJ35167.1 134 VNSVASKDGGIYLMGGLVNGSSVKGDLW 161
                 689****************877777776 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0028
     Kelch_6   1 praghslvsvggkiYifGGytds...spylnkvwvydpetksWeq 42 
                 pr+gh++ +vg+ + ++GG t     +     +++++ +t+ W++
  KHJ35167.1 183 PRVGHASLLVGNAFIVYGGDTKMddsDVLDETLYLLNTSTRQWSR 227
                 699*******************9*975555777889******986 PP

  == domain 3  score: 20.0 bits;  conditional E-value: 2.8e-07
     Kelch_6   2 raghslvsvggkiYifGGytdsspylnkvwvyd.....petksWe 41 
                 r+ghsl + g+kiY+fGG++  + + n++  +d     + t++We
  KHJ35167.1 238 RYGHSLNILGSKIYVFGGQVE-GYFMNDLVAFDlnllqVPTNRWE 281
                 789******************.9**********777776699998 PP

  == domain 4  score: 41.7 bits;  conditional E-value: 3.9e-14
     Kelch_6   1 praghslvsvggkiYifGGytdsspylnkvwvydpetksWeq...lpplpvpr 50 
                 +r+ hs+v++++k+Y+fGG ++  +++n+vw+ydp+ +sW+    ++ +pvpr
  KHJ35167.1 300 ARTNHSVVTYNEKLYLFGGTNG-LQWYNDVWCYDPIPNSWTLldcIGYIPVPR 351
                 699*******************.9*****************944435777776 PP

  == domain 5  score: 13.1 bits;  conditional E-value: 3.9e-05
     Kelch_6   2 raghslvsvggkiYifGGytdsspylnkvwvydpetksWeqlpp 45 
                 r gh++++v++  Y+fGG+ d+++ l ++  +++ +++W + + 
  KHJ35167.1 351 REGHAAAIVDDVMYVFGGRADDGSDLGDLAAFRITSRRWYTFQN 394
                 7799*******99**************************87665 PP

  == domain 6  score: 3.8 bits;  conditional E-value: 0.035
     Kelch_6   1 praghslvsvggkiYifGGy 20 
                 +r gh ++++g +i+++GG 
  KHJ35167.1 401 ARSGHCMTAHGKQIVVIGGE 420
                 5899***************6 PP

>> Kelch_1  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.4       0.2   4.5e+02       6      23 ..     136     153 ..     135     158 .. 0.81
   2 !    8.1   0.0   0.00088         2       1      41 [.     183     227 ..     183     228 .. 0.96
   3 !   21.7   0.0   4.8e-08   0.00011       2      41 ..     238     282 ..     237     283 .. 0.96
   4 !   38.9   0.3   2.1e-13   4.7e-10       1      41 [.     300     340 ..     300     341 .. 0.96
   5 !   15.7   0.0   3.6e-06    0.0081       1      45 [.     350     395 ..     350     396 .. 0.82
   6 !    8.3   0.1   0.00074       1.7       1      19 [.     401     419 ..     401     420 .. 0.97

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.2
                 EEEEETTEEEEEEEBCSS CS
     Kelch_1   6 gavvvggkiYviGGsdgg 23 
                 ++++ +g iY +GG  +g
  KHJ35167.1 136 SVASKDGGIYLMGGLVNG 153
                 788999********8765 PP

  == domain 2  score: 8.1 bits;  conditional E-value: 0.00088
                 BBBSEEEEEETTEEEEEEEBCS....SSBEEEEEEEETTTTEEEE CS
     Kelch_1   1 aragagavvvggkiYviGGsdg....gnalssvevyDpetntWre 41 
                 +r g+++  vg+   v GG            +++ +++ t +W++
  KHJ35167.1 183 PRVGHASLLVGNAFIVYGGDTKmddsDVLDETLYLLNTSTRQWSR 227
                 799****************************************98 PP

  == domain 3  score: 21.7 bits;  conditional E-value: 4.8e-08
                 BBSEEEEEETTEEEEEEEBCSSSBEEEEEEEETT.....TTEEEE CS
     Kelch_1   2 ragagavvvggkiYviGGsdggnalssvevyDpe.....tntWre 41 
                 r+g++   +g kiYv+GG+ +g +++++ ++D+      tn W+ 
  KHJ35167.1 238 RYGHSLNILGSKIYVFGGQVEGYFMNDLVAFDLNllqvpTNRWEI 282
                 99*****************************************96 PP

  == domain 4  score: 38.9 bits;  conditional E-value: 2.1e-13
                 BBBSEEEEEETTEEEEEEEBCSSSBEEEEEEEETTTTEEEE CS
     Kelch_1   1 aragagavvvggkiYviGGsdggnalssvevyDpetntWre 41 
                 ar+++++v+ ++k+Y +GG +g +  ++v++yDp  n+W+ 
  KHJ35167.1 300 ARTNHSVVTYNEKLYLFGGTNGLQWYNDVWCYDPIPNSWTL 340
                 69***********************************9985 PP

  == domain 5  score: 15.7 bits;  conditional E-value: 3.6e-06
                 BBBSEEEEEETTEEEEEEEBCS.SSBEEEEEEEETTTTEEEEECCC CS
     Kelch_1   1 aragagavvvggkiYviGGsdg.gnalssvevyDpetntWrelpsM 45 
                 +r g++a+ v++ +Yv+GG+ + g+ l ++ ++  ++  W    +M
  KHJ35167.1 350 PREGHAAAIVDDVMYVFGGRADdGSDLGDLAAFRITSRRWYTFQNM 395
                 6889****************99888887777777777777766666 PP

  == domain 6  score: 8.3 bits;  conditional E-value: 0.00074
                 BBBSEEEEEETTEEEEEEE CS
     Kelch_1   1 aragagavvvggkiYviGG 19 
                 ar+g++++++g +i viGG
  KHJ35167.1 401 ARSGHCMTAHGKQIVVIGG 419
                 69****************9 PP

>> Kelch_3  Galactose oxidase, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.1         1   2.3e+03      30      47 ..     111     135 ..      88     137 .. 0.78
   2 !   14.3   0.1   1.6e-05     0.037       4      47 ..     144     190 ..     142     192 .. 0.90
   3 !   15.9   0.1   5.3e-06     0.012       1      46 [.     193     243 ..     193     245 .. 0.83
   4 !   16.7   0.0     3e-06    0.0067       1      48 [.     247     308 ..     247     309 .. 0.77
   5 !   20.3   0.1   2.3e-07   0.00051       1      47 [.     310     357 ..     310     359 .. 0.92
   6 !   20.5   0.2   1.9e-07   0.00043       2      49 .]     361     410 ..     360     410 .. 0.85
   7 ?   -3.2   0.1       5.1   1.1e+04      36      45 ..     548     557 ..     544     558 .. 0.79

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 1
     Kelch_3  30 tWaei....aslpp...aRaghaat 47 
                  W ++    ++ pp   +R+g+a+ 
  KHJ35167.1 111 PWSQVritfSTGPPgpfPRYGAAVN 135
                 78877778855555568****9975 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 1.6e-05
     Kelch_3   4 lyifGGlgddgqdrlndvyvydldtn....tWaeiaslppaRaghaat 47 
                 +y+ GGl  +g  + +d++++  + n      +++a+ p++R+gha+ 
  KHJ35167.1 144 IYLMGGLV-NGSSVKGDLWMVEAVGNmacyPLTTTAEGPSPRVGHASL 190
                 8999****.788888******999899******************985 PP

  == domain 3  score: 15.9 bits;  conditional E-value: 5.3e-06
     Kelch_3   1 gdrlyifGGlgd..dgqdrlndvyvydldtntWaei...aslppaRaghaa 46 
                 g+ + ++GG +   d+   + ++y+++++t +W +    ++ p +R+gh++
  KHJ35167.1 193 GNAFIVYGGDTKmdDSDVLDETLYLLNTSTRQWSRAipaGPRPAGRYGHSL 243
                 686777777776877777779999**********8888889999*****97 PP

  == domain 4  score: 16.7 bits;  conditional E-value: 3e-06
     Kelch_3   1 gdrlyifGGlgddgqdrlndvyvydl.....dtntWa......ei.....aslppaRaghaata 48 
                 g ++y+fGG     + + nd+ ++dl      tn W+      e+     ++ p+aR++h++++
  KHJ35167.1 247 GSKIYVFGGQV--EGYFMNDLVAFDLnllqvPTNRWEiliknsEDggppvGQIPSARTNHSVVT 308
                 678********..444449999998877888999***7666552266666999********986 PP

  == domain 5  score: 20.3 bits;  conditional E-value: 2.3e-07
     Kelch_3   1 gdrlyifGGlgddgqdrlndvyvydldtntWaei...aslppaRaghaat 47 
                 +++ly+fGG +  g + +ndv+ yd+  n+W+ +   +  p +R ghaa+
  KHJ35167.1 310 NEKLYLFGGTN--GLQWYNDVWCYDPIPNSWTLLdciGYIPVPREGHAAA 357
                 579********..**************9****8878899999*****997 PP

  == domain 6  score: 20.5 bits;  conditional E-value: 1.9e-07
     Kelch_3   2 drlyifGGlgddgqdrlndvyvydldtn...tWaeiaslppaRaghaatai 49 
                 d +y+fGG+ dd +  l+d+ ++ + +    t+++ +++p+aR+gh++ta+
  KHJ35167.1 361 DVMYVFGGRADD-GSDLGDLAAFRITSRrwyTFQNMGQSPSARSGHCMTAH 410
                 88********75.777888888888666667999***************85 PP

  == domain 7  score: -3.2 bits;  conditional E-value: 5.1
     Kelch_3  36 slppaRagha 45 
                 + pp+R++ a
  KHJ35167.1 548 QAPPPRSNSA 557
                 679****987 PP

>> Kelch_2  Kelch motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1       0.1   2.3e+02       3      27 ..     130     155 ..     128     164 .. 0.64
   2 !    8.3   0.0     0.001       2.3       1      44 [.     183     227 ..     183     230 .. 0.82
   3 !   16.4   0.0   2.9e-06    0.0065       1      44 [.     237     282 ..     237     285 .. 0.95
   4 !   29.4   0.3   2.3e-10   5.3e-07       2      49 .]     301     345 ..     300     345 .. 0.95
   5 !   11.5   0.0    0.0001      0.23       2      42 ..     351     389 ..     350     396 .. 0.74
   6 ?    3.7   0.0      0.03        68       1      20 [.     401     420 ..     401     434 .. 0.83

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.1
     Kelch_2   3 gghsssvp...ggkiyvvGGahtdnpnl 27 
                 +g ++ ++   +g iy++GG    n+++
  KHJ35167.1 130 YGAAVNSVaskDGGIYLMGGL--VNGSS 155
                 555555556669********9..33333 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.001
     Kelch_2   1 rrgghsssvpggkiyvvGGa.htdnpnlsssdvhvldlekhvWee 44 
                 +r+gh+s  +g+  +v+GG    d+++   ++++ l++++++W++
  KHJ35167.1 183 PRVGHASLLVGNAFIVYGGDtKMDDSDVLDETLYLLNTSTRQWSR 227
                 79*****************94444444456789999999999987 PP

  == domain 3  score: 16.4 bits;  conditional E-value: 2.9e-06
     Kelch_2   1 rrgghsssvpggkiyvvGGa..htdnpnlsssdvhvldlekhvWee 44 
                 +r+ghs   +g+kiyv+GG   ++ +++l+ +d++ l   +++We 
  KHJ35167.1 237 GRYGHSLNILGSKIYVFGGQveGYFMNDLVAFDLNLLQVPTNRWEI 282
                 69******************************************86 PP

  == domain 4  score: 29.4 bits;  conditional E-value: 2.3e-10
     Kelch_2   2 rgghsssvpggkiyvvGGahtdnpnlsssdvhvldlekhvWeevtplg 49 
                 r  hs+++ + k+y++GG    n++ + +dv+++d+  ++W+++ ++g
  KHJ35167.1 301 RTNHSVVTYNEKLYLFGGT---NGLQWYNDVWCYDPIPNSWTLLDCIG 345
                 789****************...*********************99986 PP

  == domain 5  score: 11.5 bits;  conditional E-value: 0.0001
     Kelch_2   2 rgghsssvpggkiyvvGGahtdnpnlsssdvhvldlekhvW 42 
                 r gh+++ +++ +yv+GG+   ++++   d+  ++  +++W
  KHJ35167.1 351 REGHAAAIVDDVMYVFGGR--ADDGSDLGDLAAFRITSRRW 389
                 669****************..55555555666666666666 PP

  == domain 6  score: 3.7 bits;  conditional E-value: 0.03
     Kelch_2   1 rrgghsssvpggkiyvvGGa 20 
                 +r+gh ++  g +i+v+GG 
  KHJ35167.1 401 ARSGHCMTAHGKQIVVIGGE 420
                 699****************8 PP

>> DUF4160  Domain of unknown function (DUF4160)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.2   0.00024      0.54      41      66 .]    1005    1030 ..     989    1030 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00024
     DUF4160   41 glpkkelklieewveehqeellekWe 66  
                  +++ ++l+++ee++e+h++e + +W+
  KHJ35167.1 1005 EITTRKLREVEELLEAHSKEAKSNWQ 1030
                  5789*********************6 PP

>> CCDC92  Coiled-coil domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.2      0.24   5.4e+02      31      52 ..     852     873 ..     851     878 .. 0.84
   2 ?    1.1   0.0      0.15   3.3e+02      28      40 ..     898     910 ..     894     914 .. 0.93
   3 ?   10.7   0.8   0.00015      0.34      27      51 ..    1117    1141 ..    1111    1146 .. 0.89
   4 ?    3.4   3.3     0.028        63      14      43 ..    1325    1354 ..    1313    1361 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.24
      CCDC92  31 kLqkenkdLtfklimeegessq 52 
                 +Lqk+n  L  +l+ e+++++ 
  KHJ35167.1 852 ELQKKNESLNSELEAEKRTRKL 873
                 7************999988765 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.15
      CCDC92  28 EIekLqkenkdLt 40 
                 EIe+L+ e  +L+
  KHJ35167.1 898 EIERLKSEFHELQ 910
                 9**********98 PP

  == domain 3  score: 10.7 bits;  conditional E-value: 0.00015
      CCDC92   27 kEIekLqkenkdLtfklimeegess 51  
                  kEI+ Lq  n+dL+++++ ++ e++
  KHJ35167.1 1117 KEIQTLQALNTDLKYQIENQQLETN 1141
                  7****************98887776 PP

  == domain 4  score: 3.4 bits;  conditional E-value: 0.028
      CCDC92   14 LqqqhaatLkgLHkEIekLqkenkdLtfkl 43  
                  L+ ++++t +   +E+++Lqken+ L++ +
  KHJ35167.1 1325 LKHDQEETQRRAQSEVAQLQKENTLLQQRV 1354
                  88889999999999***********99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1460 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2327  (0.12979); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                       116  (0.00646996); expected 17.9 (0.001)
Passed Fwd filter:                        59  (0.00329076); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 1.85u 0.38s 00:00:02.23 Elapsed: 00:00:00.60
# Mc/sec: 7342.50
//
Query:       KHJ35168.1  [L=245]
Description: putative exosome complex exonuclease rrp40 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.1e-15   54.5   0.5    3.8e-14   52.3   0.2    2.1  2  Rrp40_N   Exosome complex exonuclease Rrp40 N-terminal domain
    1.7e-14   53.9   0.0    3.1e-14   53.1   0.0    1.5  1  KH_6      KH domain


Domain annotation for each model (and alignments):
>> Rrp40_N  Exosome complex exonuclease Rrp40 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   0.2   4.3e-18   3.8e-14       1      48 []      19      65 ..      19      65 .. 0.97
   2 ?   -0.8   0.0      0.17   1.5e+03      36      46 ..     198     208 ..     195     209 .. 0.82

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 4.3e-18
     Rrp40_N  1 PspsssklkLGPGLrhtPplstliatraGiLhtkpkkqalwiEsnskR 48
                Ps+++ +lk+GPGLr tPp + +++t+aG+L  +++k+a+w+E+   R
  KHJ35168.1 19 PSHPKLPLKIGPGLRLTPP-DIIRSTVAGHLCLDKRKNAIWVEYKGSR 65
                9******************.99*********************99877 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.17
     Rrp40_N  36 kkqalwiEsns 46 
                 ++ +lw++s s
  KHJ35168.1 198 RNGKLWVDSKS 208
                 56799***976 PP

>> KH_6  KH domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.1   0.0   3.4e-18   3.1e-14       1      45 [.     155     209 ..     155     210 .. 0.95

  Alignments for each domain:
  == domain 1  score: 53.1 bits;  conditional E-value: 3.4e-18
        KH_6   1 GmlfeVslslvrRll.........nhvLeeLgka.gpfeiavGlNGriWvksesp 45 
                 Gmlf +sl ++rRl+         + +Lee++ a ++feiavG+NG+ Wv+s+s+
  KHJ35168.1 155 GMLFPISLLMARRLMlpksaekgkIIILEEFESAgIAFEIAVGRNGKLWVDSKSV 209
                 9***********************9999***987799****************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       334  (0.018629); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1737.27
//
Query:       KHJ35169.1  [L=1701]
Description: putative related to coenzyme a synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.2e-54  182.6   0.0    1.3e-53  182.1   0.0    1.2  1  AMP-binding  AMP-binding enzyme
    2.1e-13   50.4   0.1    5.1e-13   49.2   0.1    1.7  1  PP-binding   Phosphopantetheine attachment site
    6.7e-08   32.0   0.3      0.085   12.6   0.0    6.1  6  Hexapep      Bacterial transferase hexapeptide (six repeats)
     0.0078   15.9   6.0        1.3    8.9   0.1    4.1  3  Hexapep_2    Hexapeptide repeat of succinyl-transferase
  ------ inclusion threshold ------
      0.056   12.3   0.0       0.14   11.0   0.0    1.5  2  GH3          GH3 auxin-responsive promoter
       0.68    9.8   3.4        1.7    8.4   3.4    1.6  1  YlaC         Inner membrane protein YlaC


Domain annotation for each model (and alignments):
>> AMP-binding  AMP-binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.1   0.0   4.5e-57   1.3e-53       8     422 ..     130     529 ..     126     530 .. 0.85

  Alignments for each domain:
  == domain 1  score: 182.1 bits;  conditional E-value: 4.5e-57
                  STTSEEEEECCSTEEEEHHHHHHHHHHHHHHHHHTTS.STT-EEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS-HHHHHHHHHHHTESEEEETCTC CS
  AMP-binding   8 tpdkvalvdsgegqtlTYreldervnrlAagLrslGv.kkgdrVaillpnspewvvallailkaGavvvplnptltaeelayiledseakvliatvds 104
                  t d +al+d  + ++l+ rel + ++++   ++s  + k++ +Vai+lpn++ + +a la+ +   +++p++ + ++ +l+  +e  +++v++    s
   KHJ35169.1 130 TSDSPALIDPLSERSLSHRELSSFIQNFRLPIKSERLsKRKLTVAIALPNGLSLGLACLAV-SCHYTAAPVDISGGPTQLQKDVELIQPQVIL--SRS 224
                  67999999988899*******************6566588888****************98.578999*************************..333 PP

                  CCHHHHHHHHSCC-EECEEEEESCCS-HCCHCCCHCCCCSCTTS-TSCCCS-BTTSEEEEEEE--SSSS-EEEEEEHHHHHHHHHHHHHHHCSCCTTT CS
  AMP-binding 105 elleklleaaakleavklvivldadellkeeelkeeeeseekaekpeeeeelkpddlayiiYTSGTTGkPKGVmlshrnlvanvaslkletrfklked 202
                  +++++l  +++ +++ k+v+++ +++++ + ++ ++e+   +    e+  +  ++++a+i+ TSGT G+ K V +s+ +l++  +s+ + t ++l ++
   KHJ35169.1 225 QDVKRLGLDKEWVKHNKIVLLVLDEDSNMKFTVRKKEGITIEG--IEDCIPSYEEEIAFILLTSGTSGTKKVVPVSTMSLLTG-TSC-VITSWGLISQ 318
                  3355555455545556666555555544444444444444332..334556889****************************9.565.566788879* PP

                  -EEEESS-TTSCHHHHHHHHHHHHTT-EEEE-TTCGCCHHHHHHHHHHHHT-SEEEEEHHHHHHHHH.CCCHHCHHHHCCGTT.-SEEEEESS-EBHH CS
  AMP-binding 203 dvvlsilplahifglilelllallsGatvvllpkdaaldpklllelieklkvtviagvPrvlealle.sgalkaakkakdlss.lrlvllggeplspe 298
                  d ++ ++pl hi gl+ +l++++lsG++ +l+p ++   p+l+++l+ + + t  ++ P++   +l  +++++    +  l+  +rlv  + ++l p+
   KHJ35169.1 319 DSCINMMPLNHIGGLVRNLFAPVLSGGSTILCPSFD---PNLFWDLVIRGQGTWYYASPSMHASILFeKDFRN----YLFLKNnIRLVCNASGALLPS 409
                  *********************************775...57789*******************9966355444....4466677***988******** PP

                  HHHHHHHHHTCEEEEEEEEGGGSSECEECHCTTTCTSTTS-BEE-TTEEEEEE-TTTSCBEETTSEEEEEEEETTS-SEBTT-HHHHHHHEEETCCEE CS
  AMP-binding 299 llrffralfgeevlegYGlTEttgvvtvlpleedkkklgsvGkplpgvevkivDeetgepvpdgeeGellvrgpgvmkgYlkkpeataeafdsegrwl 396
                  l++++r+ f + vl +YG+TE+ ++ t +pl+ + +++g+ G   +g +v+i + + + p+ +ge G ++vrg  ++ gYlk+     +++  e +w+
   KHJ35169.1 410 LATRLRDAFNCIVLPSYGMTECMPIST-PPLNYNLERPGTSGIS-CGPDVAIFNSK-NMPLSTGEIGHICVRGGPTFAGYLKNGMIDTKSLS-ESGWF 503
                  ***************************.9*9***********99.99*******98.99************************888888887.646** PP

                  EEEEEEEEETTSEEEEEEECCCEEEE CS
  AMP-binding 397 rTGDlgrldedGyleivgRkkdlikl 422
                  +TGDlg+ld+dGyl+++gR+k++i++
   KHJ35169.1 504 NTGDLGYLDADGYLFLTGRSKEVINR 529
                  ************************86 PP

>> PP-binding  Phosphopantetheine attachment site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.2   0.1   1.7e-16   5.1e-13       2      67 .]     779     844 ..     778     844 .. 0.97

  Alignments for each domain:
  == domain 1  score: 49.2 bits;  conditional E-value: 1.7e-16
  PP-binding   2 klrelvaevlgvpleeidpdtdlfdlGlDSllavellaaleeefgveiplsdlfehptlaelaayl 67 
                 k+++++++vl++p   i++d+d+f lG+DSl+a +ll+ l++ ++++ip   lf+ +t+++l++++
  KHJ35169.1 779 KIISAMSKVLDIPNHVIKLDSDFFQLGGDSLNAGRLLSILRRDYQIQIPIHHLFTTSTVKDLSELV 844
                 58899*********************************************************9976 PP

>> Hexapep  Bacterial transferase hexapeptide (six repeats)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.4   0.0    0.0054        16       2      17 ..    1002    1017 ..    1001    1019 .. 0.53
   2 ?    3.8   0.0     0.017        51      18      29 ..    1049    1060 ..    1047    1081 .. 0.81
   3 ?    0.4   0.0      0.21   6.3e+02      22      33 ..    1271    1282 ..    1270    1284 .. 0.80
   4 !   12.6   0.0   2.9e-05     0.085       2      34 ..    1294    1326 ..    1293    1328 .. 0.93
   5 ?   -1.4   0.0      0.77   2.3e+03       2      10 ..    1589    1597 ..    1588    1600 .. 0.53
   6 ?   -0.1   0.0      0.29   8.7e+02       4      33 ..    1643    1672 ..    1641    1674 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0054
                  EEEETTEEE-TTEEEE CS
     Hexapep    2 tvIGsnvlIgpfavig 17  
                  + IGs+v+I p +++g
  KHJ35169.1 1002 ASIGSGVVIEPDTQLG 1017
                  4555555555555554 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.017
                  TTEEE-TTEEEE CS
     Hexapep   18 gnVkIGdnvkIg 29  
                  g ++IG+n+ Ig
  KHJ35169.1 1049 GKIHIGRNCSIG 1060
                  567788888887 PP

  == domain 3  score: 0.4 bits;  conditional E-value: 0.21
                  E-TTEEEETTEE CS
     Hexapep   22 IGdnvkIgagvv 33  
                  IGd+v+ g+ ++
  KHJ35169.1 1271 IGDDVVFGSRSY 1282
                  899999998765 PP

  == domain 4  score: 12.6 bits;  conditional E-value: 2.9e-05
                  EEEETTEEE-TTEEEETTEEE-TTEEEETTEEE CS
     Hexapep    2 tvIGsnvlIgpfaviggnVkIGdnvkIgagvvi 34  
                  ++I+ +++I   +v+ ++++I ++++ g+g++ 
  KHJ35169.1 1294 IKIEAGAMIADRVVLSPGTIIESRAIMGSGATT 1326
                  589****************************96 PP

  == domain 5  score: -1.4 bits;  conditional E-value: 0.77
                  EEEETTEEE CS
     Hexapep    2 tvIGsnvlI 10  
                  ++IGsn+ I
  KHJ35169.1 1589 AKIGSNTAI 1597
                  455555544 PP

  == domain 6  score: -0.1 bits;  conditional E-value: 0.29
                  EETTEEE-TTEEEETTEEE-TTEEEETTEE CS
     Hexapep    4 IGsnvlIgpfaviggnVkIGdnvkIgagvv 33  
                  ++++++ ++++ +++++  G+++k+ +++ 
  KHJ35169.1 1643 VEDGAVMRSGTRLLSGASMGRGSKLLEHTL 1672
                  567777788999999999999999877665 PP

>> Hexapep_2  Hexapeptide repeat of succinyl-transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.1      0.33   9.8e+02      17      27 ..    1001    1011 ..     999    1013 .. 0.57
   2 !    8.9   0.1   0.00042       1.3       2      16 ..    1051    1065 ..    1050    1071 .. 0.88
   3 !    6.5   0.1    0.0023       6.8       4      21 ..    1271    1297 ..    1269    1316 .. 0.65

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.33
                  SEEE-TT-EE- CS
   Hexapep_2   17 GvslGdncvvg 27  
                  G s+G ++v++
  KHJ35169.1 1001 GASIGSGVVIE 1011
                  45555555554 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.00042
                  EEE-TT-EE-TT-EE CS
   Hexapep_2    2 viIGdnCliGanagi 16  
                  ++IG nC iG  +++
  KHJ35169.1 1051 IHIGRNCSIGLKSYV 1065
                  89***********97 PP

  == domain 3  score: 6.5 bits;  conditional E-value: 0.0023
                  E-TT-EE-TT-E.E.....S...EEE- CS
   Hexapep_2    4 IGdnCliGanag.i.....G...vslG 21  
                  IGd++++G++++ +     G   ++++
  KHJ35169.1 1271 IGDDVVFGSRSYlVtrdghGslaIKIE 1297
                  9**********9645764424444444 PP

>> GH3  GH3 auxin-responsive promoter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   4.5e-05      0.14      73     117 ..     276     318 ..     265     331 .. 0.80
   2 ?   -4.1   0.0       1.7     5e+03     394     423 ..     520     549 ..     519     560 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.5e-05
                 SSS-SEEEEECCEETTEEEEEEESHHHHHHHHHH.HHHHHHHHHH CS
         GH3  73 sepiklfalsSGTtsgksKliPvteeslkelallvlallaallsr 117
                 +e+i +++l+SGT+ g +K++Pv++ sl + ++  + ++++l+s+
  KHJ35169.1 276 EEEIAFILLTSGTS-GTKKVVPVSTMSLLTGTSC-VITSWGLISQ 318
                 578999********.*********9998875554.6667776654 PP

  == domain 2  score: -4.1 bits;  conditional E-value: 1.7
                 EECCTEEE-SSSS-CCHHHHHHHHH.HHHH CS
         GH3 394 vgRknvvlsidgeklteeelqkaveeaake 423
                 +gR+++v++  ge ++  e+++a+ +a++ 
  KHJ35169.1 520 TGRSKEVINRGGEIISPFEVEEAIITASNT 549
                 69*********************9966654 PP

>> YlaC  Inner membrane protein YlaC
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   3.4   0.00058       1.7      27      88 ..    1437    1499 ..    1419    1519 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00058
        YlaC   27 fsskfi.kkhpylflamlvsylavavlllyspylglaslilltvllillsavllldikPvyrf 88  
                  f + f  ++ py +l m++ +l ++v+   + ++  + +i+  +l++l++   ll+ +Pv  f
  KHJ35169.1 1437 FGRAFYnREAPYYVLPMYIIFLYTMVISAITRIFWDTNVIANLLLFMLIKYTTLLERRPVRSF 1499
                  5566652678***********************************************999766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1701 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       664  (0.037035); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.97u 0.29s 00:00:01.26 Elapsed: 00:00:00.48
# Mc/sec: 10683.52
//
Query:       KHJ35170.1  [L=207]
Description: putative mitotic spindle biogenesis protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.2e-43  148.8   2.7      2e-43  148.0   2.7    1.4  1  DASH_Spc19     Spc19
  ------ inclusion threshold ------
      0.059   13.7   4.1       0.36   11.1   0.0    2.7  3  BLOC1_2        Biogenesis of lysosome-related organelles comp
      0.059   13.0   4.9       0.11   12.1   4.3    1.7  1  PI3K_P85_iSH2  Phosphatidylinositol 3-kinase regulatory subun
      0.086   12.4   1.0       0.17   11.4   1.0    1.5  1  TrmK           tRNA (adenine(22)-N(1))-methyltransferase


Domain annotation for each model (and alignments):
>> DASH_Spc19  Spc19
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.0   2.7   4.6e-47     2e-43       1     157 []      32     189 ..      32     189 .. 0.87

  Alignments for each domain:
  == domain 1  score: 148.0 bits;  conditional E-value: 4.6e-47
                 .HHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH-------TTTHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  DASH_Spc19   1 LencvsSLrssvslLqssietLdsgvsdfprlkkvLkttrvFeLipesdleaakaslaeeiePqieellekaekeleklerreetLkaklelqegrlsn 99 
                 L+++vsSLr+s+slL+ssi++L  g++dfprlk++L+++r+FeL+p+s l +a++sla eieP i++ll++ae ++++ler+++ L+a+++l++grl+ 
  KHJ35170.1  32 LSSSVSSLRASLSLLESSISVLAGGTADFPRLKTILSSKRHFELVPSSRLVTAQKSLAAEIEPIITTLLSQAEGYVARLERKQQGLIARSQLLSGRLDG 130
                 89************************************************************************************************9 PP

                 ......HHHHT-XXXXXXXXXXX.X....XXXX...XXXXXXXXXXXXXXXXXXXXXXXXXX CS
  DASH_Spc19 100 aesskkeeeeseeskeeeeeeen.keeekskkk...ltkeelerlkkLkqkKerLkytlerL 157
                 a++s++++++ + ++ ++  + +   + +        ++e+++r+k+L++kKe+L y++erL
  KHJ35170.1 131 AQTSSSYKTQGSYNNGSKLVKPRdISKIE---GisnNNEERANRMKMLQRKKEKLGYNIERL 189
                 87776666555544443333332023333...2444888899*******************8 PP

>> BLOC1_2  Biogenesis of lysosome-related organelles complex-1 subunit 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   8.1e-05      0.36      38      85 ..       7      54 ..       1      59 [. 0.90
   2 ?   -2.0   0.0         1   4.6e+03      83      94 ..     102     113 ..      86     116 .. 0.68
   3 ?    2.2   1.3      0.05   2.2e+02      25      65 ..     161     201 ..     154     204 .. 0.78

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.1e-05
     BLOC1_2 38 klkdvaaslekkleklnekyeelqpylqqidqiekqvteLeeavseLD 85
                 +k++ +s+ ++l+++n++ ++l+++ +++  + ++++ Le+ +s+L 
  KHJ35170.1  7 RYKSSSSSTMSQLDYTNAQFNALNSLSSSVSSLRASLSLLESSISVLA 54
                5778899999*********************************99985 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 1
     BLOC1_2  83 eLDeyskeLEak 94 
                 + + y+ +LE k
  KHJ35170.1 102 QAEGYVARLERK 113
                 446677777776 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.05
     BLOC1_2  25 LeklNeaasekykklkdvaaslekkleklnekyeelqpylq 65 
                 + + Ne+ +++ k l+++ ++l  ++e+l  ++++ q +l+
  KHJ35170.1 161 ISNNNEERANRMKMLQRKKEKLGYNIERLVLQSQQRQRQLR 201
                 66778999999999999999999999998888888777765 PP

>> PI3K_P85_iSH2  Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   4.3   2.5e-05      0.11      81     127 ..     156     202 ..     129     205 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 2.5e-05
  PI3K_P85_iSH2  81 hEieklqenleqlksrlkelhsskekLeedlkqqkeeereleReina 127
                      ie +++n+e+  +r+k l+ +kekL  +++  + ++++ +R++ +
     KHJ35170.1 156 SKIEGISNNNEERANRMKMLQRKKEKLGYNIERLVLQSQQRQRQLRK 202
                    4578899************************************9876 PP

>> TrmK  tRNA (adenine(22)-N(1))-methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   1.0   3.7e-05      0.17      81     111 ..     172     203 ..     168     207 .] 0.88

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.7e-05
        TrmK  81 aeILeegkekLk.kvkrliLQpnnqeeelRew 111
                 +++L+++kekL  +++rl+LQ+++++ +lR+ 
  KHJ35170.1 172 MKMLQRKKEKLGyNIERLVLQSQQRQRQLRKS 203
                 67899******6489***************85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1166  (0.0650343); expected 358.6 (0.02)
Passed bias filter:                      474  (0.0264376); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1481.87
//
Query:       KHJ35171.1  [L=319]
Description: putative mipc synthase subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.4e-22   78.5   0.2    1.7e-21   76.7   0.1    2.0  2  Gly_transf_sug  Glycosyltransferase sugar-binding region cont


Domain annotation for each model (and alignments):
>> Gly_transf_sug  Glycosyltransferase sugar-binding region containing DXD motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.7   0.1   9.5e-26   1.7e-21       1      92 [.      74     156 ..      74     161 .. 0.95
   2 ?   -1.6   0.0      0.24   4.2e+03      33      60 ..     177     203 ..     169     236 .. 0.72

  Alignments for each domain:
  == domain 1  score: 76.7 bits;  conditional E-value: 9.5e-26
  Gly_transf_sug   1 perekkaieslakahpdyqvvvlskelekvrvaildlefllsdtpwfeeakkllplfialsDllRlaiLykyGGiYlDtDvivlkslrnsig 92 
                     p+++ k ++s+++ h+dy+++++++  +         +f+++++pwf+++++++p+ i+++D++R++iL +yGG+Y+D+D  + ++l ++++
      KHJ35171.1  74 PSQWVKGQQSCRNLHQDYEYILWTDIKS--------RQFIATEYPWFLTTFDAYPYAIQRADAIRYFILAHYGGVYMDLDDGCNRRL-DPLL 156
                     67899********************777........**************************************************9.8775 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.24
  Gly_transf_sug  33 aildlefllsd.tpwfeeakkllplfial 60 
                     +++ ++f+l+  ++  ++a+++++  + +
      KHJ35171.1 177 SMPKHPFFLKTiYS--LQAYQRYWGTPYI 203
                     56677777776555..6677777765544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       755  (0.0421105); expected 358.6 (0.02)
Passed bias filter:                      513  (0.0286129); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2271.11
//
Query:       KHJ35172.1  [L=462]
Description: putative gamma-butyrobetaine hydroxylase gamma-butyrobetaine dioxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.2e-44  150.4   0.0    1.1e-43  150.0   0.0    1.1  1  TauD      Taurine catabolism dioxygenase TauD, TfdA family
      9e-05   21.7   0.0    0.00022   20.5   0.0    1.7  1  CsiD      CsiD
    0.00041   20.9   0.0     0.0012   19.4   0.0    1.8  1  DUF971    Protein of unknown function (DUF971)


Domain annotation for each model (and alignments):
>> TauD  Taurine catabolism dioxygenase TauD, TfdA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.0   0.0   1.8e-47   1.1e-43      13     268 .]     178     422 ..     168     422 .. 0.81

  Alignments for each domain:
  == domain 1  score: 150.0 bits;  conditional E-value: 1.8e-47
        TauD  13 gvdlsdleslddelkeelrellaeygvvvfrgfplspeqqlefarrfGplygtpgrgtntkygevldvssvyesadianlayttllwHtDlsylesppg 111
                 ++d+s+  + ++   ++++  +++ g+v++ g+p s+e+++++a+r+Gpl++t        yg ++dv sv+e ++ a+ +++ l++H Dl+y+e+ppg
  KHJ35172.1 178 RFDYSQYINQSKTFHKVIK-SIRKWGLVFLNGVPKSEEAVEKIASRIGPLRNTF-------YGKTWDVVSVNEAKNVAY-TDKYLGLHQDLLYMENPPG 267
                 6888888665544455555.559*************************999999.......******999999999999.4444556************ PP

        TauD 112 iqlLhcleapatGGetpfvDgraaynaLpeelpellegltavrvyyhyrggglrteqelpavdkhprtghpvvrthp.....vltgrkallvn..ppfa 203
                 iq+Lhcl++  +GGe++f+D ++++++L+ ++ + l   +++   yhy++             + ++++hpv + +p        +   l+vn  ppf+
  KHJ35172.1 268 IQFLHCLKNNCKGGESLFCDAFRVAEQLSSSDYDVL---SKEKIGYHYEK-----------AGESYQRSHPVLEIDPkdqsnAIGRPLPLFVNysPPFQ 352
                 *****************************8876665...66666666666...........666*************9999855777889999887888 PP

        TauD 204 tri.eglgt...peskelldaleelledpeftyrfqwqeGdlvifdNrrvlHgrtafdeg.eeRhllrcy 268
                 +++  +  +   +e+ + l ++++ +e+ e++++ ++ +G++vif+NrrvlHgr+ f++   eR+l++cy
  KHJ35172.1 353 APFaLNFRSstfTEFVQSLGRFAQGVESVENVFKYKLLPGECVIFNNRRVLHGRECFEAQaNERWLKGCY 422
                 88854444422266666666666666656**************************994332589*****8 PP

>> CsiD  CsiD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   3.7e-08   0.00022     238     282 ..     369     413 ..     226     418 .. 0.61

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 3.7e-08
                 HHHHHHHHHHHT-TT-EEE---TT-EEEEETTTEEEEE--B---T CS
        CsiD 238 lyLkelseslenskkklevkvpvGslllinnlfwlhGrdkfeene 282
                 + L ++++ +e+ +++++ k+ +G++++ nn+  lhGr+ fe++ 
  KHJ35172.1 369 QSLGRFAQGVESVENVFKYKLLPGECVIFNNRRVLHGRECFEAQA 413
                 335566799********************************9875 PP

>> DUF971  Protein of unknown function (DUF971)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0     2e-07    0.0012      26      72 ..      83     130 ..      77     143 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 2e-07
      DUF971  26 lLRdacpcaecrkp..gqrllqsgkipkdvkiesiepvgnyalrlvfsD 72 
                  LRdac c  c++p  gq+ +++++ip ++k es++  ++ +l++++ +
  KHJ35172.1  83 ILRDACVCSMCVDPhsGQKNFKTSDIPVNIKAESMN-LKEDGLHVKWIN 130
                 6***********5556*******************9.899*******76 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (462 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       400  (0.0223102); expected 358.6 (0.02)
Passed bias filter:                      345  (0.0192426); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 3417.29
//
Query:       KHJ35173.1  [L=420]
Description: putative meiotic mrna stability protein kinase ssn3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.8e-67  226.8   0.0    3.6e-67  226.5   0.0    1.1  1  Pkinase        Protein kinase domain
    9.9e-31  106.9   0.0      2e-30  105.9   0.0    1.6  1  Pkinase_Tyr    Protein tyrosine kinase
      0.004   16.2   0.3     0.0067   15.4   0.3    1.4  1  Haspin_kinase  Haspin like kinase domain
  ------ inclusion threshold ------
       0.21   11.5   0.1        0.5   10.2   0.1    1.5  2  APH            Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  226.5   0.0     8e-71   3.6e-67       2     264 .]      43     364 ..      42     364 .. 0.92

  Alignments for each domain:
  == domain 1  score: 226.5 bits;  conditional E-value: 8e-71
                 EEEEEEEEESSEEEEEEEETTTT.EEEEEEEEECHCHCHHHH.....HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHH.... CS
     Pkinase   2 ekleklGeGsfGkVykaveketg.kivAvKkikkekakkkke.....kkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladlle.... 90 
                 + +  + +G++G+Vyka+ ++ +   +A+Kk+k +k+ ++ +     ++++rE+++  +l+h+ni++l+e++ e++ +y+v+ey+e++   ++++    
  KHJ35173.1  43 QIVGFISSGTYGRVYKAKGRQGQlGDFAIKKFKPDKEGEQVQytgisQSAIREMSLCSELSHSNIIKLIEIILEDKCIYMVFEYAEHDL-LQIIHhhtq 140
                 56667889**********77655268*************99999******************************************986.444444666 PP

                 .HHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS....BCTTTSCGGGS-HHHH.TTSCBSHHHHHHHH CS
     Pkinase  91 .rkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk....ltsfvgtseYlAPEvl.keneyskkvDvWsl 183
                  +k  +s++++k+i+ q+l+g +ylH + ++HrDlKp+Ni++ ++ge+Ki+D+Gla+ +++  +     +++v+t +Y+APE+l ++++y+++vD+W++
  KHJ35173.1 141 pNKYPISSSTIKSIMFQLLNGTHYLHTNWVLHRDLKPANIMVTSSGEVKIGDLGLARIFHKPLHplftGDKVVVTIWYRAPELLlGSRHYTPAVDMWAI 239
                 66777********************************************************999999999**************999************ PP

                 HHHHHHHHHSS-STTTSSHHHHHHHHH....HTHHHHHHHCT.SHH...HHHTTS.......................................-HHHH CS
     Pkinase 184 Gvilyelltgkppfsgekgkekvekel....dqlekilkilg.etkeklpeasei.......................................seeak 238
                 G+i++ell+ +p+f+ge+ k +++k +    +q+++i++ilg +tkek+p+  ++                                        +e  
  KHJ35173.1 240 GCIFAELLSLRPIFKGEEAKIEAKKVVpfqqNQMQRIVEILGvPTKEKWPNLVHMpeysqlstvnsnhpksfldkwyynkinasrssptsnaslGSEGY 338
                 ***************999888777654221145888888888*9999***99999***************************************99*** PP

                 HHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 239 dllkkllkkdpkkRltaeellqhpyl 264
                 +ll  ll+++p++Rlta+++lqhp++
  KHJ35173.1 339 KLLAGLLEYNPERRLTAQQALQHPFF 364
                 *************************8 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.9   0.0   4.5e-34     2e-30       7     201 ..      48     249 ..      43     360 .. 0.87

  Alignments for each domain:
  == domain 1  score: 105.9 bits;  conditional E-value: 4.5e-34
                  EEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH......HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHT... CS
  Pkinase_Tyr   7 lGeGafGkVvegtlkgekekkevkVavKtlkeeateee......keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkk... 95 
                  + +G++G+V++++ +   + +  + a+K++k +++ e+      +++ ++e+++ ++l+h ni+kl+ ++++++ +++v+ey+++ dLl+ ++++   
   KHJ35173.1  48 ISSGTYGRVYKAKGR---QGQLGDFAIKKFKPDKEGEQvqytgiSQSAIREMSLCSELSHSNIIKLIEIILEDKCIYMVFEYAEH-DLLQIIHHHtqp 141
                  789**********99...888999******988877765556667899***********************************98.788888888666 PP

                  CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEE.EETTSSTSGGGGS-HHHHHHSE.EEHHHHHHHH CS
  Pkinase_Tyr  96 ekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddey.vkkeeaklpvkWmapEslkekk.ftsksDvWsf 191
                  +k +++ +++ s+++q+ +G +yL+++ ++Hrdl   N++++++  vki+D GLar  +k  +   + ++  + + + apE l  ++ +t + D+W+ 
   KHJ35173.1 142 NKYPISSSTIKSIMFQLLNGTHYLHTNWVLHRDLKPANIMVTSSGEVKIGDLGLARIFHKPLHPlFTGDKVVVTIWYRAPELLLGSRhYTPAVDMWAI 239
                  788899999***********************************************9955555524555555666666***9876554********** PP

                  HHHHHHHHTT CS
  Pkinase_Tyr 192 GvllwEiftl 201
                  G +  E+++l
   KHJ35173.1 240 GCIFAELLSL 249
                  *******995 PP

>> Haspin_kinase  Haspin like kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.3   1.5e-06    0.0067     203     257 ..     146     199 ..      86     219 .. 0.84

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 1.5e-06
  Haspin_kinase 203 kswkqalsifwqivkiLyvaEtkfeFEHRdLhldniLvdknlnvtlidlklsRle 257
                     s ++++si++q ++  +   t++ + HRdL+  ni+v ++++v + dl l+R+ 
     KHJ35173.1 146 ISSSTIKSIMFQLLNGTHYLHTNWVL-HRDLKPANIMVTSSGEVKIGDLGLARIF 199
                    46789******************987.**************************85 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.1     5e+03       4      30 ..      47      76 ..      45      84 .. 0.75
   2 ?   10.2   0.1   0.00011       0.5     168     186 ..     170     187 ..     157     199 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.1
                EE--.SSCEEEEEEETT-...-EEEEEE-T CS
         APH  4 elsggasnrtylvttpag...ryvlrrnpp 30
                ++s+g++ r+y+ ++ +g   +++ + + p
  KHJ35173.1 47 FISSGTYGRVYKAKGRQGqlgDFAIKKFKP 76
                7999*******9999885466776666655 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 0.00011
                 EE-SS-SGGGEEEC..TTE CS
         APH 168 llHgDlhpgNllvdpddgr 186
                 +lH+Dl+p N++v++  g+
  KHJ35173.1 170 VLHRDLKPANIMVTSS-GE 187
                 68************44.33 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (420 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       559  (0.0311785); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3129.95
//
Query:       KHJ35174.1  [L=299]
Description: putative ribonuclease h-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-62  212.1   0.0    1.7e-62  211.7   0.0    1.1  1  Ydc2-catalyt  Mitochondrial resolvase Ydc2 / RNA splicing MRS
    0.00014   21.5   0.3     0.0003   20.4   0.3    1.6  1  SAP           SAP domain
    0.00032   20.8   0.3       0.55   10.3   0.0    3.4  2  Pox_A22       Poxvirus A22 protein
  ------ inclusion threshold ------
      0.072   11.7   0.0       0.11   11.0   0.0    1.2  1  DUF1744       Domain of unknown function (DUF1744)


Domain annotation for each model (and alignments):
>> Ydc2-catalyt  Mitochondrial resolvase Ydc2 / RNA splicing MRS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  211.7   0.0   3.8e-66   1.7e-62       1     277 [.      48     285 ..      48     287 .. 0.84

  Alignments for each domain:
  == domain 1  score: 211.7 bits;  conditional E-value: 3.8e-66
                   EEEEEE-STTEEEEEEEE.......-TTS-EEEEEEEEE-TT...................SS-TT--------SHHHHHHHHHHHHHHHHHHH--S CS
  Ydc2-catalyt   1 IlSIDmGikNlAfaklkvekkskkakekelptlnawkklnlsellstsaeeskseeeeeskskektkekekesfspdalaelAykLvselllaykPt 97 
                   +lSIDmGi+NlA+++l v      + +   p+++awk l++   +           +   +++e++  +eke+f p++++++Ay+L+ e ll ++Pt
    KHJ35174.1  48 VLSIDMGIRNLAYCTLDV------KLDCPPPRIHAWKNLSVFM-TP---------VNLSLRDTEEQPLQEKEAFDPETMSATAYTLLREKLLLDQPT 128
                   79****************......8999999***********2.22.........234456788888899*************************** PP

                   EEEEEE----T.TT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEEE-CCHHHHHHH...........HHH-----------HHHHHHHH CS
  Ydc2-catalyt  98 hvlIErQRfRsgggsavlewtlrvnvLEgmLyAvlytlkqesegkkaksvvigvePkrvvnYWleeessesstkekkkkkksskekKkvkidlvgsw 194
                   hv+IErQRfRs+g+ +++ewt+rvn++E +Ly++l+tlk e+  k+    vi+v P rv+ +Wl + ++      k + k++ +++K+ kidlv+sw
    KHJ35174.1 129 HVIIERQRFRSMGARHIFEWTIRVNMFEAILYGILCTLKAEGMWKG---TVIPVAPLRVGPFWLGRDDE------KGNFKNTGSRNKRRKIDLVKSW 216
                   **********************************************...9***************8876......66779999999*********** PP

                   HHTTS.......EEESS...........HHHHHHHHH--STTT...................HHHHHHHHHHHHHHHHHHHHHH CS
  Ydc2-catalyt 195 Lsaeikskakkslkislkeeaeleelv.eaylekwkkkkkskkkkkkksklakkdeesvdikKlDDLaDsllqgltwlewqanr 277
                   L++++     + +++ +ke   +     ++  +++kk++ +            + + s++ +KlDDL+D llqgl+w++w++n+
    KHJ35174.1 217 LENDS-----PIVQFGNKEALDVAGRFlKNTSSRFKKPSDEDY----------TGDISSRFGKLDDLTDALLQGLAWIQWEKNK 285
                   ***99.....334444444444422222444444444444444..........34567889*********************98 PP

>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.3   6.8e-08    0.0003       3      31 ..       3      31 ..       3      35 .. 0.95

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 6.8e-08
                T--HHHHHHHHHHTT--TTS-HHHHHHHH CS
         SAP  3 kltVaeLKeeLkkrGLptsGkKaeLieRL 31
                kl+ ++LK +  k+GL tsG+K  L++R+
  KHJ35174.1  3 KLKQTQLKLIAFKCGLNTSGTKPNLQARI 31
                899*************************8 PP

>> Pox_A22  Poxvirus A22 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.3   0.0   0.00012      0.55       3      70 ..      48     143 ..      47     151 .. 0.57
   2 !    4.9   0.0    0.0059        27     121     142 ..     258     279 ..     240     283 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00012
     Pox_A22   3 iaaiDiGvknpartllevkd.................nkarikvldiekldwssdwerrvardils..................ynvdvvllEkqgrrs 66 
                 +++iD+G++n+a+  l+vk                  +  ++ ++d e  ++ ++          +                   +++ v++E+q  rs
  KHJ35174.1  48 VLSIDMGIRNLAYCTLDVKLdcppprihawknlsvfmTPVNLSLRDTEEQPLQEKEAF-------DpetmsataytllreklllDQPTHVIIERQRFRS 139
                 78***************96547777777766666666444444444444444321111.......0111111122233344444667777777777776 PP

     Pox_A22  67 knvk 70 
                   ++
  KHJ35174.1 140 MGAR 143
                 6555 PP

  == domain 2  score: 4.9 bits;  conditional E-value: 0.0059
     Pox_A22 121 ilserkKlDDvADsfnlalkyv 142
                 i s+  KlDD+ D++  +l+++
  KHJ35174.1 258 ISSRFGKLDDLTDALLQGLAWI 279
                 567788*************997 PP

>> DUF1744  Domain of unknown function (DUF1744)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   2.5e-05      0.11     185     313 ..      29     159 ..      17     169 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 2.5e-05
     DUF1744 185 lslleelespeinnpgaYssvcveleirnLavnti.....lqsalinelEgssssvafddasseeldeyekgeaessssldesalssaafrvLrs.lvk 277
                 ++++ el+ +++ + ++Y+  ++++ irnLa +t+         +i+   +   sv + +++  +l ++e++  +++  +d +++s++a+++Lr+ l+ 
  KHJ35174.1  29 ARISRELNCISLAQADSYRVLSIDMGIRNLAYCTLdvkldCPPPRIHAWKNL--SVFMTPVNL-SLRDTEEQPLQEKEAFDPETMSATAYTLLREkLLL 124
                 456789999*************************953311123468888765..345555555.788888899999*****************965555 PP

     DUF1744 278 swlddal.kgnkladllvqhlvrWvespsslLyDpaL 313
                 +  ++++ +++++ ++   h+ +W  +   ++++  L
  KHJ35174.1 125 DQPTHVIiERQRFRSMGARHIFEWTIRV--NMFEAIL 159
                 5555555599999999999999996543..4555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (299 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       340  (0.0189637); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 2104.78
//
Query:       KHJ35175.1  [L=384]
Description: putative zinc knuckle domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.011   15.5   0.0      0.037   13.9   0.0    2.0  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   2.1e-06     0.037      65     118 ..       3      58 ..       1      59 [. 0.78

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.1e-06
  Exo_endo_phos_2  65 eehslsllnllksg.ptfkssngsstiDltltsdnlals...kleleeedlgSDHrpi 118
                      +e +++    l++g  t++s++++st+Dl + s++l+     ++   e +++SD  p+
       KHJ35175.1   3 TERNME--LILPEGmITWQSRGSQSTLDLAFISKQLLGTvirCQPSAELESSSDYIPV 58 
                      567777..3344555*********************9999976777778899986665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (384 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       663  (0.0369792); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2929.46
//
Query:       KHJ35176.1  [L=149]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
        0.5   10.6   7.4        1.7    8.9   0.1    3.4  3  zf-CCHC       Zinc knuckle
          7    6.5  12.0       0.45   10.3   3.1    3.0  3  Rubredoxin_2  Rubredoxin metal binding domain


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   0.1   0.00019       1.7       2      17 ..      60      75 ..      59      76 .. 0.86
   2 ?   -1.2   0.1      0.29   2.6e+03      14      17 ..      90      93 ..      87      93 .. 0.89
   3 ?    4.3   0.6    0.0053        47       2       8 ..      99     105 ..      98     106 .. 0.84

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00019
                CTSSSSSSSSTTTTST CS
     zf-CCHC  2 kCynCGepGHiardCp 17
                +C+n ++ GHiar C+
  KHJ35176.1 60 QCFNFQRYGHIARVCT 75
                6888899******998 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.29
                TTST CS
     zf-CCHC 14 rdCp 17
                r+Cp
  KHJ35176.1 90 RECP 93
                89*9 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.0053
                 CTSSSSS CS
     zf-CCHC   2 kCynCGe 8  
                  C nCG+
  KHJ35176.1  99 RCANCGR 105
                 7*****6 PP

>> Rubredoxin_2  Rubredoxin metal binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0      0.11   9.8e+02      13      17 ..      40      44 ..      36      45 .. 0.80
   2 ?    0.2   0.4     0.072   6.4e+02       3       6 ..      80      83 ..      79      89 .. 0.65
   3 ?   10.3   3.1     5e-05      0.45       2      19 ..      99     116 ..      99     116 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.11
  Rubredoxin_2 13 wfGrC 17
                   +++C
    KHJ35176.1 40 IMWKC 44
                  69*** PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.072
  Rubredoxin_2  3 CsqC 6 
                  C+qC
    KHJ35176.1 80 CDQC 83
                  6666 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 5e-05
  Rubredoxin_2   2 vCsqCGfesakwfGrCps 19 
                   +C +CG ++++w   Cp+
    KHJ35176.1  99 RCANCGRKHISWHSSCPA 116
                   8************99996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (149 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       839  (0.0467957); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.25s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 1076.41
//
Query:       KHJ35177.1  [L=270]
Description: hypothetical protein EV44_g4081 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (270 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       251  (0.0139997); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 2134.72
//
Query:       KHJ35178.1  [L=300]
Description: putative glycoside hydrolase family 17 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.1e-37  128.5   0.3    1.6e-36  126.5   0.3    1.7  1  Glyco_hydro_17  Glycosyl hydrolases family 17
  ------ inclusion threshold ------
      0.087   12.8   0.0        2.8    7.9   0.0    2.3  2  DUF4434         Domain of unknown function (DUF4434)
       0.19   11.6   0.0       0.35   10.8   0.0    1.3  1  APH             Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> Glyco_hydro_17  Glycosyl hydrolases family 17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.5   0.3   2.7e-40   1.6e-36      18     311 ..      32     297 ..      21     299 .. 0.89

  Alignments for each domain:
  == domain 1  score: 126.5 bits;  conditional E-value: 2.7e-40
  Glyco_hydro_17  18 vislyksnnikelrlyksdtevlkalaasnlevilnlpnsdlaelesnqskaavWvqdnvrpaaekvkikyiavgneispstsaakavflvpama 112
                      +  +ks  i++l+ +++ +++++++aasn++   +l   ++a++++ +  +++W+ ++  ++ +k   + +++ ++   +  a      v+++ 
      KHJ35178.1  32 GTCKFKSDYIEDLKTLDTLSKIVRIYAASNCDAAKELL--PAAQAQGVKVVLGIWPDTDESFQKDK--SAVLTYAPQYADQVYAV----TVGSES 118
                     34468999999***************************..****************9998776666..99999999877666555....9***** PP

  Glyco_hydro_17 113 nirnaltaaglsnkikvstalaldildssyppsqstfreevkpvvdpivvflagtnspllvnvyPYfvysndpsnvsLdyalfqkqslvndngla 207
                     ++r + t  +l +ki ++++              + f++++    d++++f +gt  p+++     +   n+       ++++q+q+++     a
      KHJ35178.1 119 LYRGNFTGEQLLSKILDVKEA-------L----GGKFKVGT---ADSWNKFHDGTADPVIKGGA-DIILCNA-------FSYWQGQAIAD----A 187
                     ************988776543.......2....57799**9...9***************9866.4778888.......9*********7....9 PP

  Glyco_hydro_17 208 yrnlfDaildavyaaqekkGgt..dielvvsEtGWPsdGstgaslenaatyveNlikkvkeGtpskpgkgietyvfalFdEnqKpees....... 293
                     +  lfD+i++a   +q+ +Gg     el+v+E+GWPs+G+    ++na++ ++ +  ++++ ++  + +g++++ f++FdE +Kp++        
      KHJ35178.1 188 SSTLFDDIFQAFGHIQNVAGGAdkAPELWVGEAGWPSAGQ---RYQNAQPGITEASTFWSQSICGIRMWGVNIFSFEAFDEPWKPKSVgtdgnaa 279
                     99*******************944469*************...8*****************************************9988899999 PP

  Glyco_hydro_17 294 vekhfGvfkpdkslkYsl 311
                      e h+Gvf++d+s+k+ +
      KHJ35178.1 280 DETHWGVFNADRSPKFAI 297
                     9**************987 PP

>> DUF4434  Domain of unknown function (DUF4434)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.9   0.0   0.00047       2.8      62     113 ..      60     110 ..      37     121 .. 0.77
   2 ?    2.9   0.0     0.017     1e+02      61     103 ..     124     165 ..     110     207 .. 0.77

  Alignments for each domain:
  == domain 1  score: 7.9 bits;  conditional E-value: 0.00047
                 -SB-HHHHHHHHHHHTT-EEEEE--B-SHHHH.HS-GGGGHHHHHHHHHHHH CS
     DUF4434  62 kakdlveaiLdaAdklgmkvflglnydeewwdveedlsweielakrvaeela 113
                  + d  +++L aA+ +g+kv+lg+  d ++ ++++d s+  + a + a++++
  KHJ35178.1  60 SNCDAAKELLPAAQAQGVKVVLGIWPD-TDESFQKDKSAVLTYAPQYADQVY 110
                 555778899**************9766.555556777777777777777776 PP

  == domain 2  score: 2.9 bits;  conditional E-value: 0.017
                 --SB-HHHHHHHHHHHTT-EEEEE--B-SHHHH.HS-GGGGHH CS
     DUF4434  61 kkakdlveaiLdaAdklgmkvflglnydeewwdveedlsweie 103
                  + ++l+ +iLd  + lg k+ +g+ ++ + ++ +++++  i+
  KHJ35178.1 124 FTGEQLLSKILDVKEALGGKFKVGTADSWNKFH-DGTADPVIK 165
                 46789999*****************98744444.566666555 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   5.9e-05      0.35      24      78 ..      53     103 ..      37     109 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 5.9e-05
                 EEEEE-TTS-HHHHHHHHHHHHHHHHTT-B--B-CTTBS-EEETTEEEEEEE--- CS
         APH  24 vlrrnpparaaeeirrevallrlLakagvpvPevlagdtddeeigllfalieyvp 78 
                 ++r+++++     + +  +ll + +++gv+v   ++ dtd+ ++   +a+++y p
  KHJ35178.1  53 IVRIYAAS----NCDAAKELLPAAQAQGVKVVLGIWPDTDESFQKDKSAVLTYAP 103
                 78888888....************************************9999965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (300 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       389  (0.0216967); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2117.32
//
Query:       KHJ35179.1  [L=2207]
Description: putative myosin class ii heavy chain [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.14   11.9   1.1       0.41   10.4   1.1    1.9  1  PAM2      Ataxin-2 C-terminal region


Domain annotation for each model (and alignments):
>> PAM2  Ataxin-2 C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.1   2.3e-05      0.41       1      14 [.     796     809 ..     796     813 .. 0.90

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 2.3e-05
                 -----SSTTSS--- CS
        PAM2   1 akkSkLNPnAkEFV 14 
                 a++SkLN+ AkEF+
  KHJ35179.1 796 ASFSKLNVTAKEFT 809
                 689**********7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1733  (0.096659); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 1.45u 0.32s 00:00:01.77 Elapsed: 00:00:00.55
# Mc/sec: 12050.59
//
Query:       KHJ35180.1  [L=499]
Description: putative mutator-like element protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    0.00039   20.5   3.3    0.00077   19.5   2.6    1.9  2  Med9         RNA polymerase II transcription mediator complex
      0.009   16.1   5.3      0.031   14.3   4.2    2.2  2  TPR_MLP1_2   TPR/MLP1/MLP2-like protein
     0.0099   16.6   0.3      0.024   15.3   0.3    1.7  1  FAR1         FAR1 DNA-binding domain
  ------ inclusion threshold ------
      0.022   15.0   3.1      0.056   13.7   3.1    1.6  1  THOC7        Tho complex subunit 7
       0.12   12.3   4.8       0.31   11.0   4.8    1.6  1  Prefoldin_2  Prefoldin subunit
       0.67   10.3   7.8       0.23   11.8   4.0    2.2  3  OmpH         Outer membrane protein (OmpH-like)


Domain annotation for each model (and alignments):
>> Med9  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0       4.6   1.4e+04      37      46 ..     387     396 ..     384     405 .. 0.59
   2 !   19.5   2.6   2.6e-07   0.00077      41      77 ..     429     466 ..     421     469 .. 0.83

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 4.6
        Med9  37 karelirelp 46 
                 +ar++i+ +p
  KHJ35180.1 387 NARAAIKRDP 396
                 5666666665 PP

  == domain 2  score: 19.5 bits;  conditional E-value: 2.6e-07
        Med9  41 lirelpg.idrsveeqeaeieeleeqlakKrelLkkyk 77 
                  +++ +  i++++e + +e+eel+ ql+ K+++++k+ 
  KHJ35180.1 429 EVANAQAeIEKTKEAWRKEVEELKTQLDEKQKMIEKFE 466
                 44444445****************************96 PP

>> TPR_MLP1_2  TPR/MLP1/MLP2-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0       0.4   1.2e+03      75     105 ..     345     375 ..     342     379 .. 0.83
   2 !   14.3   4.2   1.1e-05     0.031      71     113 ..     421     463 ..     401     466 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.4
  TPR_MLP1_2  75 elkaeaesakaeleeseesweeqkeelekel 105
                 +l  +a +a ++lee+  s +e+ e l +e 
  KHJ35180.1 345 KLDPKAIAAVKALEENGVSVKETLEILHREN 375
                 6777888999999999999999999998885 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 1.1e-05
  TPR_MLP1_2  71 aeiaelkaeaesakaeleeseesweeqkeelekelselekrie 113
                 + +ael++e+ +a+ae+e+ +e+w ++ eel+++l+e +k ie
  KHJ35180.1 421 KLRAELRTEVANAQAEIEKTKEAWRKEVEELKTQLDEKQKMIE 463
                 5679*********************************999887 PP

>> FAR1  FAR1 DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.3   8.1e-06     0.024       4      77 ..     248     318 ..     245     333 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 8.1e-06
        FAR1   4 keYakrvGFsvrvkksrrsrkdgeiirrkfvCskeGfkkekkktkeakrerastrtgCkAmlvvkkekegkwvv 77 
                 +++a   G++  + +s+r ++     +  ++C + G++kek + ++++r+ +s ++gC+  +    e++  wv+
  KHJ35180.1 248 QAHALAHGYAFVIGRSKRDNRGL--KKVFLICDRGGTNKEKLHGEQRQRKTKSRKCGCEFGV-FGLENKHAWVL 318
                 66777778887777777664443..555679**********9998999999999****8554.34455555555 PP

>> THOC7  Tho complex subunit 7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   3.1   1.9e-05     0.056      70     104 ..     427     461 ..     416     470 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.9e-05
       THOC7  70 reryeaekeeieseieavreeieelkaqLeearat 104
                 r ++++ ++eie++ ea r+e eelk+qL+e++++
  KHJ35180.1 427 RTEVANAQAEIEKTKEAWRKEVEELKTQLDEKQKM 461
                 67888899*************************98 PP

>> Prefoldin_2  Prefoldin subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   4.8    0.0001      0.31      58      96 ..     428     466 ..     424     470 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.0001
                  E-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Prefoldin_2  58 qdkeevkeeLeerketlekeiktlekqleklekeleelk 96 
                  ++++++++e e++ke   ke+++l+ ql++++k +e+++
   KHJ35180.1 428 TEVANAQAEIEKTKEAWRKEVEELKTQLDEKQKMIEKFE 466
                  688999***************************999986 PP

>> OmpH  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1       3.3   9.9e+03      66      74 ..     159     167 ..     144     185 .. 0.50
   2 ?   -2.7   0.0       2.2   6.7e+03      96     116 ..     241     261 ..     238     267 .. 0.80
   3 ?   11.8   4.0   7.7e-05      0.23      15      51 ..     428     464 ..     420     475 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 3.3
                 HHHHHHHHH CS
        OmpH  66 qkkeqelqq 74 
                 q ++q +qq
  KHJ35180.1 159 QSRQQSVQQ 167
                 333333332 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2.2
                 HHHHHHHHHHHHHTT-SEEEE CS
        OmpH  96 dkinkaikevakekgydlvld 116
                 + + ++ ++ a ++gy++v+ 
  KHJ35180.1 241 EALFAFAQAHALAHGYAFVIG 261
                 566778899999*******97 PP

  == domain 3  score: 11.8 bits;  conditional E-value: 7.7e-05
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        OmpH  15 pegkaaqeqlekkfkklqaeleakekelqklqeelqk 51 
                 +e  +aq+++ek+++++++e+e+++++l+++q+ ++k
  KHJ35180.1 428 TEVANAQAEIEKTKEAWRKEVEELKTQLDEKQKMIEK 464
                 57889***************************99874 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1733  (0.096659); expected 358.6 (0.02)
Passed bias filter:                      911  (0.0508115); expected 358.6 (0.02)
Passed Vit filter:                       156  (0.00870099); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.76u 0.31s 00:00:01.07 Elapsed: 00:00:00.47
# Mc/sec: 3167.78
//
Query:       KHJ35181.1  [L=151]
Description: putative mitochondrial 54s ribosomal protein 19 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.4e-26   92.1   0.3    2.4e-26   91.4   0.3    1.3  1  Ribosomal_L11_N  Ribosomal protein L11, N-terminal domain
    9.3e-26   90.1   0.8    1.3e-25   89.6   0.1    1.6  2  Ribosomal_L11    Ribosomal protein L11, RNA binding domain


Domain annotation for each model (and alignments):
>> Ribosomal_L11_N  Ribosomal protein L11, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.4   0.3   2.6e-30   2.4e-26       4      65 .]       8      70 ..       3      70 .. 0.96

  Alignments for each domain:
  == domain 1  score: 91.4 bits;  conditional E-value: 2.6e-30
  Ribosomal_L11_N  4 vvkvvklrvpaGkAtpaPplGpaLGplGlnikkfckefnkaTkd.kkglripVkitvyqdrsf 65
                     v +vvkl+v aG+A+p+Pp+G+aLG++G++ ++fckefn++T++  +g+++pV++tv +drsf
       KHJ35181.1  8 VDQVVKLIVGAGQASPGPPVGQALGSKGIKSMDFCKEFNARTANfVTGTPMPVRVTVRPDRSF 70
                     779***********************************************************9 PP

>> Ribosomal_L11  Ribosomal protein L11, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.74   6.7e+03      50      61 ..       6      17 ..       2      21 .. 0.68
   2 !   89.6   0.1   1.5e-29   1.3e-25       1      70 []      75     149 ..      75     149 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.74
                   .SHHHHHHHHHH CS
  Ribosomal_L11 50 lsleaavksilg 61
                   + ++++vk i+g
     KHJ35181.1  6 IAVDQVVKLIVG 17
                   456777888877 PP

  == domain 2  score: 89.6 bits;  conditional E-value: 1.5e-29
                    ---SHHHHHHHHHTXS....SXXSSTTTSXXEEEEHHHHHHHHHHHGGGHT.XS.SHHHHHHHHHHHHCTTTEEE CS
  Ribosomal_L11   1 ktPptsylLkkaagie....kgsgkpgketvGtvslkqvyeIAkiKksdln.aalsleaavksilgtArsmGikV 70 
                    +tP tsylL+kaag++    k +gk+g++++Gt+slk+vyeIAkiK+s+l+ ++lsle+++++i+++A+ +Gi++
     KHJ35181.1  75 RTPITSYLLLKAAGVDlrdgKLKGKTGSQIIGTISLKHVYEIAKIKQSELRlSGLSLEGICRCIIAQAKTVGIDI 149
                    69**************776666777899*********************************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (151 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       314  (0.0175135); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.27s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 1101.27
//
Query:       KHJ35182.1  [L=763]
Description: putative wyosine base formation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.2e-22   78.3   0.0    1.2e-21   76.8   0.0    1.8  2  Wyosine_form  Wyosine base formation
    2.8e-20   73.4   0.1    8.9e-20   71.7   0.1    2.0  1  Radical_SAM   Radical SAM superfamily
    2.1e-10   40.9   0.1    3.8e-09   36.9   0.1    2.4  1  Flavodoxin_1  Flavodoxin


Domain annotation for each model (and alignments):
>> Wyosine_form  Wyosine base formation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       2.1   1.3e+04      29      42 ..     279     292 ..     279     294 .. 0.87
   2 !   76.8   0.0     2e-25   1.2e-21       2      62 ..     623     691 ..     622     692 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.1
                   -HHHHHHHHHHHHT CS
  Wyosine_form  29 wheevadfakrleg 42 
                   w+e+v+d  k++++
    KHJ35182.1 279 WTEGVLDVLKQVAS 292
                   99*****9999976 PP

  == domain 2  score: 76.8 bits;  conditional E-value: 2e-25
                   HT-SEEEEEE--------....----------HHHHHHHHHHHHTSSS.....EEEEEEETTTTEEEEE CS
  Wyosine_form   2 aepdFvEvKaytyvGssr....srLtmknvPwheevadfakrlegsae....dYellaehrhSrvvlla 62 
                   + p+FvE+K++ty+Gs +      Ltm+nvP+++ev+ f+++l + ++     Y+++aeh+hS++vl+a
    KHJ35182.1 623 SLPCFVEIKGVTYCGSNTskagVGLTMQNVPFYDEVCTFVQELDRELSrrelGYGIAAEHAHSCCVLIA 691
                   67**************99877778*****************555555555559***************9 PP

>> Radical_SAM  Radical SAM superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.7   0.1   1.5e-23   8.9e-20       3     159 ..     437     611 ..     435     620 .. 0.90

  Alignments for each domain:
  == domain 1  score: 71.7 bits;  conditional E-value: 1.5e-23
                  EESEESS--TTTSCCTT..HHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEE.....................SSTGGGSTTHHHHHHHHHHTCCCT CS
                  xxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....................xxxxxxxxxxxxxxxxxxxxxxxx RF
  Radical_SAM   3 vtrgCnlrCsfCarpet..vrregrgrslsveeileevkelkaekgvkevilg.....................ggepllypdfvellerlaklavpg 77 
                  ++  C+++C+fC+r+ t  v++++r+r+ ++e i   vk+ + ++ +k +  +                      gep++yp++ e+++ l++     
   KHJ35182.1 437 PSLSCSNKCVFCWRHGTnpVGTTWRWRVDPPELIYSGVKASH-YQKIKMMRGVpgvraerfteamnirhcalslVGEPIFYPHINEFTALLHAD---H 530
                  6678*************************************7.333555555599999999999999999999********************8...9 PP

                  EEEEEEECSSCHGHHHHHHHHHTT-SEEEEEEBSSSHH...HHHHHHTCTSHHHHHHHHHHHHHHTTSET.EEEEEEEBTTTSHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx RF
  Radical_SAM  78 iritvetngtlpdeeklerllelgvdrvslgleaadde...kvlklmnrghtfeevlealeklreagikr.vvdrivglpGendee 159
                  i++++++n+ +p  ++l+ l++  v++++++++a + e   k+ +++  ++ +e++ ++l++lr ++++  +v+r+++ +G+n+e+
   KHJ35182.1 531 ISTFLVCNAQHP--DQLASLKP--VTQLYVSIDASNREslrKIDRPL-HRDFWERFNRCLDILRHRRFEQrTVFRLTLTKGFNMED 611
                  ***********7..55555555..9*************999999999.66*********************************986 PP

>> Flavodoxin_1  Flavodoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.9   0.1   6.3e-13   3.8e-09       1     143 []     115     279 ..     115     279 .. 0.74

  Alignments for each domain:
  == domain 1  score: 36.9 bits;  conditional E-value: 6.3e-13
                   EEEETSSSHHHHHHHHHHHHHHHTTTEEEEEEEEGTTSC....GGGGGTHSEEEEEEEEETTTBEEGGGH.HHHHHHHHHHCHH............. CS
  Flavodoxin_1   1 ilYgSetGnteklAkqlaeelgehgfnadvvslsdydes....lseieeealllvvtsTfgnGdppenge.sffqdllelkgde............. 79 
                   +++ S tG+t++ Ak   + l +  ++ + ++ + + +s    lsei+ +++ l+      + d++  +  +f    +     +             
    KHJ35182.1 115 VFFSSLTGTTKNTAKIFVDSLARSLLKIKTFQTRIFLDSevldLSEIDFYDFFLKSPN---DNDAEIRNFyLFLLPSY-----Nidtildnfiehlk 203
                   89*****************999988888888777666666555666665555554444...45555443323333333.....14456788888888 PP

                   ........GCCSTTTTEEEEEEEEECTTSSS.....TTHHHHHHHHHHHH.TTCEEESSSEEEETTSTHGHHHHHHHH CS
  Flavodoxin_1  80 ........ledgdlsgvrfavfglGdsayen.....Fcaagkkldeklee.lGaerllkllegdednqegqeeafrkW 143
                           + ++  s + ++vfg+Gd+++++     Fc  ++ +d+++ +  G++r ++l+ gd ++  + +e ++kW
    KHJ35182.1 204 ethndfriNLAPLSSILGYSVFGFGDREGWPtenmgFCSQARHVDKWMARlTGGKRAFPLGMGDIKT--DGQENLEKW 279
                   888888863333446689********************************77*************99..555557777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (763 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.41
# Mc/sec: 5621.89
//
Query:       KHJ35183.1  [L=180]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.069   13.2   1.0       0.12   12.4   1.0    1.3  1  CCD       WisP family C-Terminal Region
       0.13   12.1   0.1       0.26   11.2   0.1    1.4  1  DUF2610   Domain of unknown function (DUF2610)


Domain annotation for each model (and alignments):
>> CCD  WisP family C-Terminal Region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   1.0   1.3e-05      0.12      60     118 ..      22      81 ..      14      86 .. 0.88

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.3e-05
         CCD  60 ssttnatgntsgktr.vkrdtpttppehplksvndqitkvtdavnnfqksvltslknfft 118
                 s  t+ +g  sgk + v ++   + pe p      q t vt a n  +k+ +t  +n++t
  KHJ35183.1  22 SKPTKGSGAGSGKGKiVEKNVAVATPELPKPPQTSQNTWVTVARNSQKKARVTQSNNIYT 81 
                 5668899999**988467899999******************************999998 PP

>> DUF2610  Domain of unknown function (DUF2610)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.1   2.9e-05      0.26      18      53 ..      41      76 ..      32      81 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 2.9e-05
     DUF2610 18 aiyigepkpdehPlefQadWlskeRggqvpeevves 53
                ++ +  p+  ++P + Q++W+  +R  q  ++v++s
  KHJ35183.1 41 NVAVATPELPKPPQTSQNTWVTVARNSQKKARVTQS 76
                688999********************9998888876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (180 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1372.50
//
Query:       KHJ35184.1  [L=776]
Description: putative ribosome biogenesis protein erb1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   2.8e-105  351.9   5.3   4.2e-105  351.3   5.3    1.3  1  BOP1NT       BOP1NT (NUC169) domain
    6.2e-24   83.8   5.5    1.7e-09   38.1   0.7    5.1  5  WD40         WD domain, G-beta repeat
    5.7e-07   29.7   0.1     0.0008   19.7   0.0    3.7  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> BOP1NT  BOP1NT (NUC169) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  351.3   5.3  7.1e-109  4.2e-105       1     260 []     159     418 ..     159     418 .. 0.97

  Alignments for each domain:
  == domain 1  score: 351.3 bits;  conditional E-value: 7.1e-109
      BOP1NT   1 YddydhiGYdidgkkimkeakkdeldkllekiddpkawrtvkDkktgkevkLsdeelelikrlqkgelpdeeydpyedvvelftseeeihplseapepk 99 
                 Yd y+hiGYdi+gk++m++ak+++ld+ll++i+ pk w+ ++D++tgk ++Ls++ele+++++q +e+p + ydpy+ ++e+fts eei+pls+apepk
  KHJ35184.1 159 YDTYPHIGYDINGKRVMRPAKGEALDALLDSIELPKGWTGITDPATGKPLQLSQDELEILRKIQMNEVPGDGYDPYPATIEYFTSVEEIMPLSAAPEPK 257
                 9************************************************************************************************** PP

      BOP1NT 100 rrfipskweakkvaklvrairkgrikl....ekkekeeeekvydlWedeeeeeeekrkkeehipapklklPgheeSYnPpeeyllteeekkeweeadpe 194
                 +rfipsk eakk++k+vrair+gri      e++ek+ee+ ++dlW+de++  +    +  +ipapkl++Pg++ SYnPp+eyl+++ ek++we+++p+
  KHJ35184.1 258 QRFIPSKYEAKKIMKIVRAIREGRILPyqplEEREKDEEKIFFDLWKDEKSLPD----NVMNIPAPKLAPPGYDLSYNPPPEYLPSKTEKEAWESTEPD 352
                 *************************9888887777778899******9888644....4456************************************* PP

      BOP1NT 195 drkknfipqkfeslrkvpaYekfvkerFeRcLDLyLcpRvrkkrlnidpesLlPkLPspkdLkPFP 260
                 dr+++++p+k++slrkvpaY++fvkerFeRcLDLyL+pRvrk+rlnidp+sLlPkLP+p++L+PFP
  KHJ35184.1 353 DREREYLPTKYDSLRKVPAYNNFVKERFERCLDLYLAPRVRKNRLNIDPTSLLPKLPKPEELRPFP 418
                 *****************************************************************9 PP

>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.1   0.7   2.8e-13   1.7e-09       3      37 ..     421     456 ..     419     457 .. 0.91
   2 ?   -2.5   0.0       1.9   1.1e+04       5      35 ..     593     632 ..     591     635 .. 0.51
   3 !    6.9   0.0    0.0021        13       9      34 ..     648     673 ..     639     675 .. 0.80
   4 !    6.6   0.0    0.0026        16       3      37 ..     684     720 ..     682     721 .. 0.83
   5 !   30.3   0.1   8.4e-11     5e-07       3      37 ..     736     775 ..     734     776 .] 0.90

  Alignments for each domain:
  == domain 1  score: 38.1 bits;  conditional E-value: 2.8e-13
                 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGHss.vtslafspdgawlasGsdDgtvriW 37 
                 c +++ GHs+ v+sl ++p+g wlasG+dDgt+riW
  KHJ35184.1 421 CSTIFCGHSGrVRSLEVDPSGVWLASGGDDGTIRIW 456
                 778999**445************************* PP

  == domain 2  score: -2.5 bits;  conditional E-value: 1.9
                 EEEESS.SSEEEEE............EETTSSEEEEEETTSEEE CS
        WD40   5 rtltGH.ssvtsla............fspdgawlasGsdDgtvr 35 
                 +tl+ H +    +             f+p+ + l+ ++  + +r
  KHJ35184.1 593 HTLSKHlTQ---IPfrrlpgipqtaqFHPSRPILFVAT-QQAIR 632
                 566666433...21222223333334888888877666.66666 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.0021
                 SSSSEEEEEEETTSSEEEEEETTSEE CS
        WD40   9 GHssvtslafspdgawlasGsdDgtv 34 
                 G  +++s++++p g+ ++ Gs+D+ +
  KHJ35184.1 648 GARWISSIDVHPGGDNIIVGSYDRRL 673
                 444599*****************975 PP

  == domain 4  score: 6.6 bits;  conditional E-value: 0.0026
                 EEEEEESS.SSEEEEEEETTSSEEEE.EETTSEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlas.GsdDgtvriW 37 
                 + +tl+ H + +++++f++ g  l++ +sdDg++ i+
  KHJ35184.1 684 PYKTLRFHsKAIRAVKFHKGGIPLFAdASDDGSLQIF 720
                 56899***888****999999999864588*999886 PP

  == domain 5  score: 30.3 bits;  conditional E-value: 8.4e-11
                 EEEEEESS..SS...EEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   3 clrtltGH..ss...vtslafspdgawlasGsdDgtvriW 37 
                 +l++l+GH  ++   v +++++p+ +w +s++ Dgt+r+W
  KHJ35184.1 736 PLKVLKGHkvKNalgVMDIDWHPSEPWCVSAGADGTCRLW 775
                 799*****8855799************998888******* PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   1.3e-07    0.0008      36      90 ..     427     481 ..     419     482 .. 0.94
   2 ?   -2.9   0.0       1.5   8.9e+03      39      54 ..     564     579 ..     552     593 .. 0.74
   3 ?   -2.7   0.0       1.3   7.5e+03      48      81 ..     618     650 ..     615     658 .. 0.69
   4 ?   -0.5   0.0      0.26   1.6e+03      37      66 ..     691     721 ..     663     736 .. 0.79
   5 !    5.0   0.0     0.005        30      28      64 ..     738     774 ..     707     776 .] 0.85

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 1.3e-07
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  +++++vrsL+  p+g  La + +dg++r+ +  +g+ + + ++++++ v+ + W 
   KHJ35184.1 427 GHSGRVRSLEVDPSGVWLASGGDDGTIRIWELLTGRQIWHTKIDNDEPVNVVRWR 481
                  57899*************************************************5 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.5
  ANAPC4_WD40  39 sevrsLaWkpdgklLa 54 
                  + ++ ++W+  g ++ 
   KHJ35184.1 564 NIIKVISWHRRGDFFT 579
                  4567788888887765 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1.3
  ANAPC4_WD40  48 pdgklLavaysdgevrlldaesgkvvhslsvkse 81 
                  p+  +L va++  ++r +d +++++++ l+ ++ 
   KHJ35184.1 618 PSRPILFVATQ-QAIRSYDLQKQELLKILQPGAR 650
                  55556666665.4789999999998887776655 PP

  == domain 4  score: -0.5 bits;  conditional E-value: 0.26
  ANAPC4_WD40  37 edsevrsLaWkpdgk.lLavaysdgevrlld 66 
                  +++ +r++++++ g  l+a a +dg++++++
   KHJ35184.1 691 HSKAIRAVKFHKGGIpLFADASDDGSLQIFH 721
                  6788999999999962667788899999987 PP

  == domain 5  score: 5.0 bits;  conditional E-value: 0.005
  ANAPC4_WD40  28 rvwtleedkedsevrsLaWkpdgklLavaysdgevrl 64 
                  +v ++++ k+   v ++ W+p++   + a +dg++rl
   KHJ35184.1 738 KVLKGHKVKNALGVMDIDWHPSEPWCVSAGADGTCRL 774
                  6777788899999**********************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (776 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.67u 0.28s 00:00:00.95 Elapsed: 00:00:00.45
# Mc/sec: 5169.37
//
Query:       KHJ35185.1  [L=476]
Description: putative vacuolar atp synthase subunit h [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-76  258.2   0.1    1.5e-76  257.7   0.1    1.2  1  V-ATPase_H_N  V-ATPase subunit H
    1.4e-34  118.7   0.1    5.9e-34  116.7   0.0    2.0  2  V-ATPase_H_C  V-ATPase subunit H


Domain annotation for each model (and alignments):
>> V-ATPase_H_N  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  257.7   0.1   1.6e-80   1.5e-76       2     312 ..       8     346 ..       7     349 .. 0.97

  Alignments for each domain:
  == domain 1  score: 257.7 bits;  conditional E-value: 1.6e-80
  V-ATPase_H_N   2 vlqelankirarkipWegyvrsqliseedlkliksldkakkeqraklldedgpqyvklll......nLlskl.skedtlqyiLvlidDllsedksrv 91 
                   +l++l+n+ir+r+i+Weg vr+++i++e+l+ i+++dk++keqr++++++d + y  l+l      ++l  + ++ d++qyiLvl++Dll+ +++++
    KHJ35185.1   8 YLSSLQNNIRSRPIAWEGTVRAGTITNEQLQKIRAVDKVRKEQRKQIIESDLDGYRALFLgadgilSILDAAvKRADVVQYILVLLADLLDGNPAFS 104
                   7899***********************************************************9998888889************************ PP

  V-ATPase_H_N  92 elflslakkeeqdpwkpflkllnrqddfivllalrllakllvqgkkksnklvesaLnrllqlLssqlssstnevieiavrllqellrtkeyRelfve 188
                   +++ +  + + ++++  +l ++n+++++i+ll++++l+ l+++++ + +  +++aL +l+++Lss+++ s+ ++++iav ++++llr+k+ R lf++
    KHJ35185.1 105 KALSQ--HPSPYKVFTTLLAHSNEPENPIPLLTSTVLTALISESSVEFSS-KKTALLDLFRYLSSLTHVSDGSFQDIAVLQYSNLLREKSSRMLFWS 198
                   *9988..889999********************************99888.79******************************************** PP

  V-ATPase_H_N 189 ..adgvstlisilr........................stvanstrvgiQlqYqvllclWlLsFekkiaeelvkkk.elipllvdilrdsvKEKvtR 258
                     ++++ +li+ilr                         ++     vg+Ql+Y+vll+lW+LsFe + ++ + +++ ++ipl+v++lr s KEK+tR
    KHJ35185.1 199 qrKQTIDPLIKILRaatgttneevrppllpgttngrgnIEAIVGGGVGLQLLYHVLLVLWQLSFESETIGVIFQDEyDIIPLYVQLLRLSSKEKITR 295
                   *************************************97777889**************************************************** PP

  V-ATPase_H_N 259 vilatlrNllekaeksskelaavmvqvkllkllenLeerkfsDeditedleyLk 312
                   +i++ l+Nl+++++++   l++ +v v+l+ ll+n+  r+ sD+d++edl +L 
    KHJ35185.1 296 LIISSLLNLISTNRQN---LLPIAVIVRLPTLLQNIIGRHLSDPDVSEDLRNLA 346
                   **************88...*******************************9986 PP

>> V-ATPase_H_C  V-ATPase subunit H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0      0.64   5.7e+03      37      65 ..     271     299 ..     253     313 .. 0.52
   2 !  116.7   0.0   6.5e-38   5.9e-34       2     114 ..     356     471 ..     355     473 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.64
  V-ATPase_H_C  37 eeknfkllkkLiklleeskdktvlavaln 65 
                    +++++++   ++ll+ s+++++  ++++
    KHJ35185.1 271 FQDEYDIIPLYVQLLRLSSKEKITRLIIS 299
                   44445555555555543444333333333 PP

  == domain 2  score: 116.7 bits;  conditional E-value: 6.5e-38
  V-ATPase_H_C   2 ltsfdeYlaElesgkLewspvHksekFWkenaekl.eeknfkllkkLikll..eeskdktvlavalnDigelvkllpegkkvleklkaKekimelle 95 
                   +t+fdeY+aE++sg+L+wsp+Hk+  FW ena+k+ + +   l kkL +++  + ++dk+vla+a+nDig++vk++pe++  lekl+ K+++mel++
    KHJ35185.1 356 QTTFDEYAAEINSGHLQWSPPHKNPIFWAENARKIlDYEGGVLPKKLSEIMakTWENDKQVLAIACNDIGSIVKEVPEKRLQLEKLGLKKRVMELMQ 452
                   79*********************************666778899*******76336789************************************** PP

  V-ATPase_H_C  96 hedeevkyeALkavqkllv 114
                   ++de+v++e+L+a++ +l 
    KHJ35185.1 453 ESDESVRWESLNALSGWLR 471
                   **************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       588  (0.032796); expected 358.6 (0.02)
Passed bias filter:                      469  (0.0261587); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.43
# Mc/sec: 3292.42
//
Query:       KHJ35186.1  [L=896]
Description: putative sulfate transporter family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      4e-62  210.2  23.9    6.4e-62  209.5  23.9    1.3  1  Sulfate_transp  Sulfate permease family
    2.3e-11   43.6   0.0      5e-11   42.5   0.0    1.6  1  cNMP_binding    Cyclic nucleotide-binding domain
    6.4e-11   41.9   0.3    1.5e-10   40.8   0.3    1.6  1  STAS            STAS domain


Domain annotation for each model (and alignments):
>> Sulfate_transp  Sulfate permease family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  209.5  23.9   1.1e-65   6.4e-62       5     379 ..     109     504 ..     106     505 .. 0.89

  Alignments for each domain:
  == domain 1  score: 209.5 bits;  conditional E-value: 1.1e-65
  Sulfate_transp   5 liaGitvallaiPqalayal.lagl..ppiygL.........yssvvpqlvyalfGtsrqlavGpvavl.....slivgeiiakvaeee....pe 78 
                     l+a+ +++ll+i++al+y++ l++l  p+++ L         +s++v+qlv++ +G+++   vG+++++      l++g+i++++ +++      
      KHJ35186.1 109 LPAVALGLLLNILDALSYGMiLFPLgePLFSKLgpagismffVSCIVSQLVFSCGGSVFRGGVGSEMIEvvpffHLMAGTILKEIGDTNpsavIA 203
                     7899999*************9*****99****************************************9999999**********6666332233 PP

  Sulfate_transp  79 kgieiattltllaGviqvllGllRLgflveflseavlsGfiaGaaivillsqikvllglervskkeslvsvlsslftnlekvnlakvvlgllllv 173
                     + i   ++++ll+G++++l+G l++g +v f+++++l+G+i+G++++++++ ++v+ +l+   k e+   +l+ lf++  +  +  +v++l l v
      KHJ35186.1 204 TTILTYAISSLLTGAVFFLIGYLKVGHMVGFIPRHILIGCIGGVGFFLMITGLEVTARLD---KLEYSLLTLHRLFQPD-T--VSLWVIPLALAV 292
                     3344456789*************************************************8...9************996.6..5689***98766 PP

  Sulfate_transp 174 vLlvtkellkklkkllvipapaelvavivatlvsaif....elkreagvki....vgeipsg.lpelslpkvdwsllsallpdalaialvglle. 258
                     + + t+++++ +  + ++pa+   + v+++++++ +     +++r+ g+++    +ge     +   +++ ++w+ + + +p+++a++++g+l+ 
      KHJ35186.1 293 LQISTESIID-F--KYFLPAFVLTIPVVFYFIIACFStlnvSNLRNDGWIFqspeAGESWWYfYTLYNFRIIRWDSILKCVPAMFALTFFGILHv 384
                     6666666655.4..489999999************99999999999***96666655555443777788899**********************9 PP

  Sulfate_transp 259 aiavsksldkkkgykvdsnkELvAlGfsNilsslfgglpatgafsrsavnikaGaktqlsglvsalvvllvllvltplleyiPkavLaaiiivag 353
                      i v + + ++ + ++d n EL+A+G+sN ls++fg+++++ ++++s+++ik+G+ +ql+g+++a+++ +v+++++ ++ yiP+++++a+++++g
      KHJ35186.1 385 PINVPSLASAIGEDRIDLNSELLAHGASNALSGMFGSVQNYLVYTNSVIFIKSGGGSQLAGIMLAIATGIVMMMGSLIIGYIPIMMVGALMFILG 479
                     566666666677777******************************************************************************** PP

  Sulfate_transp 354 kglLvelkelkklwk.lskldflilla 379
                     ++lL+e  ++++ +k l+ l++l+++ 
      KHJ35186.1 480 IELLKE--AVWDPRKkLKSLEYLTVVT 504
                     **9999..*****999******99875 PP

>> cNMP_binding  Cyclic nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0   8.4e-15     5e-11       3      85 ..     781     861 ..     779     864 .. 0.93

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 8.4e-15
                   EE-TT-EEE-TTSB-SEEEEEEES-EEEEEEETTS.EEEEEEE-TTEEESHHHHHHTS--SSEEEESSTEEEEEEEHHHHHHH CS
  cNMP_binding   3 sfkagevifrqGdpadslyivlsGevrvyrlsedgkevvlavlgpGdlfGelalltgeprtatvvAltdsellalprddflel 85 
                    f a++++++ Gd+a+ ++++++G +      ++g  +  + + +  +fGel ++ ++++tatvvA +d+  ++l+r+++ +l
    KHJ35186.1 781 DFIANTIVYQSGDQANDFFLLEQGIMYAEYDLPQG--NFCEKIVACTTFGELPFFSDTTQTATVVAESDCATWVLDRENWISL 861
                   57799********************99988*****..6799**************99********************998765 PP

>> STAS  STAS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.3   2.4e-14   1.5e-10       8     114 ..     567     671 ..     561     674 .. 0.91

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 2.4e-14
                 TTEEEEEEEEEESHHHHHHHHHHHHHHHHCCC........-SEEEEEEEEEEEE-HHHHHHHHHHHHHHHHTT-EEEEES--HHHHHH..HHHTTCGGC CS
        STAS   8 egililrldgpidfanaesfkeklkravgeepervekkeslkslildlsavsfiDssGvraLkeilkelkrigvevvlvnikpevrek..lektgffde 104
                   i++++l+g ++f+++  +++++++++++++    +++++++li+dl +v+ +D s+ +a+ +i + + ++g+++++++++ +v+ +  le+++++++
  KHJ35186.1 567 GQICVVKLNGFLFFGTIANVEDRMRQIIEKDEF---DRRPIRFLIFDLFHVTGLDFSAREAFGRINRFMCKKGIQIIMSGLNNRVELRlsLEAVDLCKD 662
                 568****************************74...78***********************************************99978888888877 PP

                 C..SEEESSH CS
        STAS 105 veeeklfltv 114
                   + ++f+++
  KHJ35186.1 663 D-KIQMFEDL 671
                 6.66777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (896 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.68u 0.28s 00:00:00.96 Elapsed: 00:00:00.43
# Mc/sec: 6329.95
//
Query:       KHJ35187.1  [L=445]
Description: putative glycine cleavage system t protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-82  275.6   0.0    4.4e-82  275.3   0.0    1.1  1  GCV_T     Aminomethyltransferase folate-binding domain
    3.8e-21   74.8   0.1    8.4e-21   73.7   0.1    1.6  1  GCV_T_C   Glycine cleavage T-protein C-terminal barrel domain
  ------ inclusion threshold ------
      0.052   13.7   0.1       0.39   10.9   0.0    2.5  3  SoxG      Sarcosine oxidase, gamma subunit family


Domain annotation for each model (and alignments):
>> GCV_T  Aminomethyltransferase folate-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  275.3   0.0   7.4e-86   4.4e-82       1     257 []      55     324 ..      55     324 .. 0.95

  Alignments for each domain:
  == domain 1  score: 275.3 bits;  conditional E-value: 7.4e-86
       GCV_T   1 lydrhkalgakfvefagwemPvqYasesikaehlavreaaglfDvShmgkievsGpdaaalLqrlltndisklkpgkatytlllne.dGgvidDlivar 98 
                 lyd+h+ +g ++v f+g+ mP+qY   si+a+h+ +re+a+lfDvShm ++ ++Gp+a ++L+r++++d+++l+  ++ ++++l + +Gg++dD+i++r
  KHJ35187.1  55 LYDLHVSHGGNMVGFGGYLMPLQYTGLSIIASHHFTRENASLFDVSHMVQHSITGPGAREFLERVTPSDLKGLPHRTGGLSVFLWPkSGGIVDDTIITR 153
                 79*************************************************************************9999999998769*********** PP

       GCV_T  99 ldedefllvvnaankekdlawlekaaek....kdldvevedvteelallalqGPkarevlskll...gad.lselkffsfaevela.....ggkkvlvs 184
                 ld ++f++v+na++++kdl++l ++ ++    ++ +v+++ +++  +l+alqGP+++e+ls ++   ++  l++l f +++ ++++       +++lv+
  KHJ35187.1 154 LDSESFYVVTNAGCRQKDLEYLGNELQAfqksGGNEVKWNVLDN-HGLVALQGPRSEEILSNVIvsaEITsLKDLYFTQSTYIKIKisnnaTSEPLLVT 251
                 *********************98877778877888999999776.7******************9653336999999999999999***988889**** PP

       GCV_T 185 RtgytGedGfeiyipaeeaeelweaLleagkeegvkpaGlgArdtlRlEaglrlyghdldeettPleaglgwa 257
                 R gytGedGfei+ip++e  +++e Ll++ ++ +++ aGlgArd+lRlEag++lyghdld++ttP+eagl w+
  KHJ35187.1 252 RGGYTGEDGFEISIPNKEIVDVVEVLLKSATSDKLQLAGLGARDSLRLEAGMCLYGHDLDDKTTPVEAGLSWV 324
                 ************************************************************************7 PP

>> GCV_T_C  Glycine cleavage T-protein C-terminal barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.7   0.1   1.4e-24   8.4e-21       1      78 [.     357     433 ..     357     434 .. 0.94

  Alignments for each domain:
  == domain 1  score: 73.7 bits;  conditional E-value: 1.4e-24
     GCV_T_C   1 Rrlvgleld.dgapllrggepilr.dgevvGhvTSgaysptlgksialAyvkaelaklgtevevevrgkrvpaevvkkpf 78 
                 Rr vg+ ++      +r+g++i++ dg+++G vTSg++sp+lgk+i ++y+k+++++ gt+v+v vrgk+ +a v+k+pf
  KHJ35187.1 357 RRRVGIIVEgA---PAREGAKIIDlDGAEIGNVTSGCPSPSLGKNISMGYIKDGFHRSGTHVKVLVRGKKREAHVTKMPF 433
                 89******633...36*******66******************************************************9 PP

>> SoxG  Sarcosine oxidase, gamma subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   6.5e-05      0.39      58      96 ..      88     125 ..      53     135 .. 0.87
   2 ?   -1.6   0.0      0.47   2.8e+03      75      90 ..     200     215 ..     176     219 .. 0.78
   3 ?   -3.5   0.0       1.7     1e+04      67      85 ..     353     371 ..     345     372 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 6.5e-05
        SoxG  58 ealaelasvvdlShgrvlisisGakaeavlakltaiDls 96 
                 + + e as+ d+Sh  v+ si+G+ a++ l ++t+ Dl+
  KHJ35187.1  88 HFTRENASLFDVSHM-VQHSITGPGAREFLERVTPSDLK 125
                 4566799*******6.999******************96 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.47
        SoxG  75 lisisGakaeavlakl 90 
                 l+ ++G+++e++l+++
  KHJ35187.1 200 LVALQGPRSEEILSNV 215
                 67789******99875 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 1.7
        SoxG  67 vdlShgrvlisisGakaea 85 
                  ++  +rv i ++Ga a++
  KHJ35187.1 353 LGVTRRRVGIIVEGAPARE 371
                 5678899*******99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       241  (0.0134419); expected 358.6 (0.02)
Passed bias filter:                      239  (0.0133304); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 3194.75
//
Query:       KHJ35188.1  [L=369]
Description: putative 50s ribosomal protein l2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-52  177.1   5.0      2e-52  176.6   3.9    1.8  2  Ribosomal_L2_C  Ribosomal Proteins L2, C-terminal domain
    3.3e-25   87.9   0.6    8.8e-25   86.5   0.6    1.8  1  Ribosomal_L2    Ribosomal Proteins L2, RNA binding domain


Domain annotation for each model (and alignments):
>> Ribosomal_L2_C  Ribosomal Proteins L2, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0      0.75   6.8e+03      13      31 ..     131     149 ..     127     169 .. 0.69
   2 !  176.6   3.9   2.3e-56     2e-52       2     126 .]     205     336 ..     204     336 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 0.75
                     TTB-BBSE-SSTTS--SSS CS
  Ribosomal_L2_C  13 eGtivhnielkpgkggkla 31 
                         v  ie  pg+ +++a
      KHJ35188.1 131 GPHRVERIEHDPGRSAHIA 149
                     5566788899999888887 PP

  == domain 2  score: 176.6 bits;  conditional E-value: 2.3e-56
                     SSS-EBSSSS-TTB-BBSE-SSTTS--SSS-SSSB-EEBB-B........SSEEEEEETTS-EEEEETTSBEBES-BS-TTCTT----STTHHHH CS
  Ribosomal_L2_C   2 vGnvlplknipeGtivhnielkpgkggklarsaGtyaqvvak.....e..gkkvtvklpSgevrkvssecrAtiGvvsngehkekklgkAgrkrw 89 
                     +Gn+lpl++ip+Gt+v+n+ +++gkg+ ++rsaGtya +v+k     +  +k+v+++l+Sgevrkvs++++AtiGv sn++h++ +lgkAgr+rw
      KHJ35188.1 205 RGNCLPLHMIPVGTLVYNVGSQKGKGAVFCRSAGTYAVIVSKedetkKggSKYVIIRLQSGEVRKVSKHACATIGVASNPHHQHAQLGKAGRSRW 299
                     59***************************************76655425689******************************************* PP

                     TTBS----SSSS-TTTSSS--SSSS--SSSSTEETTC CS
  Ribosomal_L2_C  90 lgrrpkvrGvamnpvdHphGGGeGktksrkapvspwg 126
                     l++rp+vrG+amn++dHphGGG+Gk+k++ +pvspwg
      KHJ35188.1 300 LNIRPTVRGLAMNAADHPHGGGRGKSKGNVNPVSPWG 336
                     ************************************8 PP

>> Ribosomal_L2  Ribosomal Proteins L2, RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.5   0.6   9.8e-29   8.8e-25       1      76 [.     100     175 ..     100     176 .. 0.94

  Alignments for each domain:
  == domain 1  score: 86.5 bits;  conditional E-value: 9.8e-29
                   TB-TT--BSSTT--------EE-B--S---SS--EEEEEEE--TT-SS-EEEEEETT.TEEEEEE--SS--SS-EE- CS
  Ribosomal_L2   1 GrnnsgritvrhrggGhkkkyrlidfkrnkekvkgkVveieyDpgRsApiAlvkyed.gekryiiapeglkvGdtvv 76 
                   Grnn+gr+tvrh ggGhk ++r +df+r   + +++V++ie+DpgRsA+iAl++ e  g+k+yiia+eg+++Gd+v 
    KHJ35188.1 100 GRNNTGRVTVRHMGGGHKTRIRTVDFQRHVPG-PHRVERIEHDPGRSAHIALLNEEAtGKKSYIIAAEGMRAGDIVH 175
                   9*************************886555.59********************999*****************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       308  (0.0171789); expected 358.6 (0.02)
Passed bias filter:                      267  (0.0148921); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2804.30
//
Query:       KHJ35189.1  [L=175]
Description: hypothetical protein EV44_g4385 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.1e-46  156.2   0.4    8.2e-46  156.0   0.4    1.0  1  ARD           ARD/ARD' family
    5.5e-09   35.6   0.0    9.1e-09   34.9   0.0    1.3  1  Cupin_2       Cupin domain
    1.2e-06   28.4   0.0    1.9e-06   27.8   0.0    1.2  1  AraC_binding  AraC-like ligand binding domain


Domain annotation for each model (and alignments):
>> ARD  ARD/ARD' family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.0   0.4   1.4e-49   8.2e-46       1     157 []       2     150 ..       2     150 .. 0.90

  Alignments for each domain:
  == domain 1  score: 156.0 bits;  conditional E-value: 1.4e-49
         ARD   1 riyimddseegderlphhtspkekaeelelaklgvlrwkldaddeeeaeeeekilktkeeekkdidvevlkestpnfdeklekFfeEhlhedeeirliv 99 
                 r+y ++d++ +d+rlph++     ++ ++la++gvl+++++ +de  +++++++++++++++ ++   + ++  + ++ek+ +Ff Ehlhedeeir+i+
  KHJ35189.1   2 RAYWYQDDG-SDQRLPHDSG--RDVSPEYLAQIGVLYYRVSSEDE--VDKLAEQRHYRNRDVITV---SPQKMGDIYEEKVRSFFTEHLHEDEEIRYIL 92 
                 6899*****.5*******99..999***************99854..455666666666665555...45667789*********************** PP

         ARD 100 eGtgyFdvrskdeawirvlvekGDLivlPagiyhrFtltednkvkalRlFvekekwva 157
                 +G+gyFdvrsk ++w r+++ k DLi+lPagiyhrFt++e+n++ a+RlF+e++kw++
  KHJ35189.1  93 DGAGYFDVRSKTDEWLRIRLVKDDLIILPAGIYHRFTTDENNFITAMRLFKEDPKWTP 150
                 ********************************************************86 PP

>> Cupin_2  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.9   0.0   1.5e-12   9.1e-09      12      61 ..      79     132 ..      72     139 .. 0.91

  Alignments for each domain:
  == domain 1  score: 34.9 bits;  conditional E-value: 1.5e-12
                 EEECSSSEEEEEEEEESEEEEEECTE.....EEEEETTEEEEE-TT-EEEEEE-S CS
     Cupin_2  12 pshrHpgedeffyVleGegeltvdge.....eveleaGdsvyfpagtpHrfrNtg 61 
                  +h H++e e++y+l+G g + v ++     +++l ++d+++ pag  Hrf  ++
  KHJ35189.1  79 TEHLHEDE-EIRYILDGAGYFDVRSKtdewlRIRLVKDDLIILPAGIYHRFTTDE 132
                 68******.***************88888**********************7665 PP

>> AraC_binding  AraC-like ligand binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   3.2e-10   1.9e-06      14      67 ..      76     134 ..      69     145 .. 0.92

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 3.2e-10
                   -SEEEETT-SEEEEEEEEE-EEEEETTEE.....EEE-TT-EEEE-TTS-EEEEE-TTS CS
  AraC_binding  14 hsfpphvhdeyvihyvteGtgrlrlngrt.....ydlgpGdlfLlppgepHdyesdsed 67 
                     f +h h+  +i y+++G+g++ ++ +t      +l ++dl++lp g  H++  d+++
    KHJ35189.1  76 SFFTEHLHEDEEIRYILDGAGYFDVRSKTdewlrIRLVKDDLIILPAGIYHRFTTDENN 134
                   4689***************************************************9975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       416  (0.0232026); expected 358.6 (0.02)
Passed bias filter:                      368  (0.0205254); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 1221.53
//
Query:       KHJ35190.1  [L=476]
Description: putative g2 mitotic-specific cyclin-b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-45  153.6   0.2    3.2e-43  146.5   0.1    2.3  2  Cyclin_N  Cyclin, N-terminal domain
      5e-37  126.6   0.2    1.1e-36  125.5   0.2    1.6  1  Cyclin_C  Cyclin, C-terminal domain
  ------ inclusion threshold ------
       0.09   12.3   0.3       0.23   11.0   0.3    1.7  1  CHZ       Histone chaperone domain CHZ


Domain annotation for each model (and alignments):
>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.5   0.1   5.4e-47   3.2e-43       1     127 []     212     338 ..     212     338 .. 0.99
   2 !    5.1   0.0    0.0031        18      35     111 ..     343     416 ..     340     436 .. 0.74

  Alignments for each domain:
  == domain 1  score: 146.5 bits;  conditional E-value: 5.4e-47
                 HHHHHHHHHHCHTS-STTCTTCTSSS-HHHHHHHHHHHHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHSSS---HHHHH CS
    Cyclin_N   1 dilknlieqelkflpkpdyldqqpelnpemRailidwlvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKveeisppkledlv 99 
                 +i+++l++ e  ++p+ +y+d q++l+++mR il+dwl+ev+++f+l petlflavn++dRfls+k v+ d+lqlvg+t++++A+K+ee+ +p++ ++ 
  KHJ35190.1 212 EIFEYLKKLEVSTQPNARYMDHQEDLEWKMRGILVDWLIEVHTRFHLLPETLFLAVNIIDRFLSTKAVQLDRLQLVGVTAMFIASKYEEVLSPHVANFR 310
                 79************************************************************************************************* PP

                 HHTTTSS-HHHHHHHHHHHHHHTTT--- CS
    Cyclin_N 100 yitdeafteeeilemErliLetLnfdls 127
                 +++d+ fte eil +Er++L++Ln+dls
  KHJ35190.1 311 HVADDGFTEAEILSAERYVLTALNYDLS 338
                 **************************95 PP

  == domain 2  score: 5.1 bits;  conditional E-value: 0.0031
                 HHHHHHHHHHTT--TTHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHH..HSSS---HHHHHHHTTTSS-HHHH CS
    Cyclin_N  35 idwlvevaekfkltpetlflavnyldRflskksvpkdklqlvgatcLllAaKv..eeisppkledlvyitdeafteeei 111
                 +++l ++++  + + +t  la  +++  l  + + ++   +++a+++++A K+  + +++ +l++++ +++     e+i
  KHJ35190.1 343 MNFLRRISKADDYDIQTRTLAKYLMEVSLLDHRFMNYLPSRIAAASMYMARKIldRGDWSATLSHYAGYNE-----EQI 416
                 567888888888888888999999999999999999999**************442334555555544443.....333 PP

>> Cyclin_C  Cyclin, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  125.5   0.2   1.8e-40   1.1e-36       1     117 [.     340     452 ..     340     454 .. 0.96

  Alignments for each domain:
  == domain 1  score: 125.5 bits;  conditional E-value: 1.8e-40
                 --HHHHHHHHHCCSSHT.-HCCHHCHHCHHHHHHCSCCHCCS-HHHHHHHHHHHCCHHHHS--S-HHHHHHC---HHHHHHHHHHHHHHHHHHHGSS-- CS
    Cyclin_C   1 ptplsFlrrflkaadasedselrtlakylleltlldydflsyppSliAaaalllarstlnspewtetlehytgyskedlkpcvelilellssapssklq 99 
                 p p++Flrr++ka+d+  d+++rtlakyl+e++lld++f++y+pS iAaa++++ar++l++++w+ tl hy gy++e+++p+ +l++++l  a+  +++
  KHJ35190.1 340 PNPMNFLRRISKADDY--DIQTRTLAKYLMEVSLLDHRFMNYLPSRIAAASMYMARKILDRGDWSATLSHYAGYNEEQIQPVFKLMVDYL--ARPVTHE 434
                 89***********999..999*********************************************************************..67889** PP

                 HHCCCCTCGGGCCCGGS- CS
    Cyclin_C 100 avrrkyssskfhkvstls 117
                 a+++ky+s++f k+s l+
  KHJ35190.1 435 AFFKKYASKRFLKASILT 452
                 ************988765 PP

>> CHZ  Histone chaperone domain CHZ
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.3   3.8e-05      0.23       7      25 ..      14      32 ..       9      37 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3.8e-05
         CHZ  7 eEIDtsNIIsgGRRTRgkt 25
                +EID+ NI  ++R TR+k 
  KHJ35190.1 14 NEIDENNILVTTRLTRSKS 32
                6***************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       607  (0.0338558); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3435.40
//
Query:       KHJ35191.1  [L=394]
Description: putative ctr copper transporter family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      7e-05   22.6   0.1    0.00016   21.4   0.1    1.6  1  Abhydrolase_1  alpha/beta hydrolase fold
    8.8e-05   23.2   0.0    0.00011   22.9   0.0    1.2  1  Abhydrolase_6  Alpha/beta hydrolase family
  ------ inclusion threshold ------
      0.023   14.0   0.0      0.041   13.1   0.0    1.4  1  Hydrolase_4    Serine aminopeptidase, S33


Domain annotation for each model (and alignments):
>> Abhydrolase_1  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.4   0.1   2.6e-08   0.00016      13     107 ..     122     229 ..     101     263 .. 0.68

  Alignments for each domain:
  == domain 1  score: 21.4 bits;  conditional E-value: 2.6e-08
                    GGG..GTTGHHHHHHHHTTSEEEEEEETTSTTSSSTTTGB.CHHSHHHHHHHHHHHHHHCTTS........SEEEEEETHHHHHHHHHHHHHGGGE CS
  Abhydrolase_1  13 sdv..waerglapaLakdgfdvillDlrGvgySspapacinddygtasvaddldrildalgdd........kltlvGhSmGGmialayaaeyperV 98 
                    ++    +   ++ + +++g+ ++ +D +G+g+S++++    +  ++ ++ ++ + i +al+ +        k+++vGh +G++i+   a +yp  V
     KHJ35191.1 122 GYDgdTYS--WIAYASQQGYPTLSIDRLGNGESDRPSGL--TVVQMGTHIEVTQGIINALKRGligrrafnKIIYVGHWYGSLIGNLHAVKYPFAV 213
                    22233222..44455666********************9..666666677777755555543222223443999********************** PP

                    EEEEEESE.......C CS
  Abhydrolase_1  99 kalvllga.......i 107
                    ++ vl+g        +
     KHJ35191.1 214 DSYVLTGFtkkirpsL 229
                    *****99866655554 PP

>> Abhydrolase_6  Alpha/beta hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   1.8e-08   0.00011       2     113 ..     101     230 ..     100     385 .. 0.55

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 1.8e-08
                    EEE--GC.....G.........C....HHHHHHHHCCTCEEEEE--TTSTS-GGCS--HHHC.....HHH.HHHHCCTT.....TTSE...EEEEE CS
  Abhydrolase_6   2 lllHGagssassW.........l....vapLaallaagvhvlapDlpGhGrsdpppldledl.....adl.aalldelaa...gggpv...vlvGH 72 
                    ll+HG  ++++ W         +    ++ +a+++ +g+ +l++D+ G+G  +++p +l+ +      ++   ++++l+    g++++   + vGH
     KHJ35191.1 101 LLVHGITYTKDYWsglgapgngYdgdtYSWIAYASQQGYPTLSIDRLGNG-ESDRPSGLTVVqmgthIEVtQGIINALKRgliGRRAFnkiIYVGH 195
                    89***999999998877666552333455668888888************.444444443322233322233344444445543333366599*** PP

                    TCHHHHHHHHHHCC..EE..EEES-..----TTTS----TTHH CS
  Abhydrolase_6  73 SlGGalalaaaplalvvg..vlldppptalpagllaaalelll 113
                     +G +++ +   +a  v+   ++d+    + +g+   +++ ll
     KHJ35191.1 196 WYGSLIGNL---HA--VKypFAVDS---YVLTGFTKKIRPSLL 230
                    *********...77..333366666...333333222211111 PP

>> Hydrolase_4  Serine aminopeptidase, S33
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.0   6.9e-06     0.041      28     117 ..     135     229 ..     126     328 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 6.9e-06
  Hydrolase_4  28 aaqGfavyalDhrGhGrsegkrg.hvpsfddyvdDlaafvekvkeehpel....plfllGhSmGGliallyllrypdkvaglilsaPalkikakl 117
                   +qG+ ++ +D  G G+s+   g  v ++ ++++  + +++++k+   ++    +++ +Gh  G+li  l++ +yp  v+  +l++   ki+++l
   KHJ35191.1 135 SQQGYPTLSIDRLGNGESDRPSGlTVVQMGTHIEVTQGIINALKRGLIGRrafnKIIYVGHWYGSLIGNLHAVKYPFAVDSYVLTGFTKKIRPSL 229
                  79*****************55444888888888888888888886655555677*******************************9988888775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       388  (0.0216409); expected 358.6 (0.02)
Passed bias filter:                      343  (0.019131); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2949.79
//
Query:       KHJ35192.1  [L=445]
Description: putative hmg box protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.5e-11   42.7   4.4    5.9e-11   42.6   0.9    2.3  2  HMG_box          HMG (high mobility group) box
     0.0007   20.1   0.7     0.0016   19.0   0.7    1.6  1  HMG_box_2        HMG-box domain
     0.0015   17.8   0.1     0.0028   17.0   0.1    1.4  1  MATalpha_HMGbox  Mating-type protein MAT alpha 1 HMG-box


Domain annotation for each model (and alignments):
>> HMG_box  HMG (high mobility group) box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.6   0.9   9.8e-15   5.9e-11       1      69 []     106     174 ..     106     174 .. 0.99
   2 ?    0.7   0.1      0.12     7e+02      43      65 ..     199     221 ..     197     224 .. 0.84

  Alignments for each domain:
  == domain 1  score: 42.6 bits;  conditional E-value: 9.8e-15
                 --SS--HHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     HMG_box   1 pkRplsafflfskeqraklkaenPelknaeiskklgekWkalseeeKkkYeekaekekaryekekpeyk 69 
                 +kRp++af+l++k+ +   k    +++ + is+ +g+ W  +++  K ++++ a+ e+  ++k+ peyk
  KHJ35192.1 106 IKRPMNAFMLYRKAFQNIAKVLFAKNNHQVISQVCGQSWELENAPIKSQFHDWAQIERDNHHKAFPEYK 174
                 6*******************************************************************8 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.12
                 HHHHHHHHHHHHHHHHHHHHHHH CS
     HMG_box  43 seeeKkkYeekaekekaryekek 65 
                 s++e +++e ++ k  ++y+ ++
  KHJ35192.1 199 SDSETRPWESASLKRAKKYDDDY 221
                 67889999999999999999887 PP

>> HMG_box_2  HMG-box domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.7   2.7e-07    0.0016       1      67 [.     103     168 ..     103     174 .. 0.92

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 2.7e-07
                 ---.-SS--HHHHHHHTTHHHHHHHT---SSHHHHTGGGHHHHHHS-HHHHHHHHHHHHHHHHHHHH CS
   HMG_box_2   1 pkkpkaarnAYalfvqemipelkrkGnpviglaevsklcsekWkalseeeKekYeekAkedkkrydr 67 
                 p+k k+++nA++l+ +  ++ +k      ++ + +s+ c+++W + ++  K+++++ A++ + +  +
  KHJ35192.1 103 PEKIKRPMNAFMLYRKAFQNIAKVL-FAKNNHQVISQVCGQSWELENAPIKSQFHDWAQIERDNHHK 168
                 7899*******************99.999********************************998776 PP

>> MATalpha_HMGbox  Mating-type protein MAT alpha 1 HMG-box
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.1   4.7e-07    0.0028      23      80 ..      85     147 ..      67     161 .. 0.74

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 4.7e-07
  MATalpha_HMGbox  23 mmkeaveivake.sreakakkakkklNgFmgfRsYy....lkLfsdlqqkeaSgfltqlWekd 80 
                      ++ + +e  +ke + ++k++k k+++N+Fm +R  +      Lf + + + +S++ +q We +
       KHJ35192.1  85 YVSRSTEERRKEiKEGKKPEKIKRPMNAFMLYRKAFqniaKVLFAKNNHQVISQVCGQSWELE 147
                      344434433443588999***************988676556899999999999999999976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (445 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      284  (0.0158403); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.47u 0.22s 00:00:00.69 Elapsed: 00:00:00.37
# Mc/sec: 3647.94
//
Query:       KHJ35193.1  [L=173]
Description: hypothetical protein EV44_g3713 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.038   13.6   0.0      0.052   13.2   0.0    1.1  1  RVT_2            Reverse transcriptase (RNA-dependent DNA pol
        0.1   12.0   0.0       0.15   11.4   0.0    1.2  1  Glyco_hydro_38N  Glycosyl hydrolases family 38 N-terminal dom


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   5.8e-06     0.052      10      73 ..     100     161 ..      92     168 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 5.8e-06
       RVT_2  10 kdrkaigsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaaee 73 
                 k+ +   sr v   k  + ++   k+r v+ G+s +a++ y  + +  i+  s rLl+a+aa  
  KHJ35193.1 100 KNIRLFKSRMVREVKG-KNENSFEKSRFVIAGHS-HADKSYIPTQSQTIQRVSQRLLIAIAAFL 161
                 6667777888888885.5566678*********8.5899**********************965 PP

>> Glyco_hydro_38N  Glycosyl hydrolases family 38 N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   1.6e-05      0.15       4      41 ..     128     165 ..     125     168 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 1.6e-05
                      EEEEEE--SSSSS-HHHHHCCTCHHHHHHHHHHHHHST CS
  Glyco_hydro_38N   4 vvpHsHiDvgWlktvdeyqrrkvqrilssvlellerdp 41 
                      + +HsH D  ++ t++++ +r  qr l  + + l++ +
       KHJ35193.1 128 IAGHSHADKSYIPTQSQTIQRVSQRLLIAIAAFLQEST 165
                      569***************99999999988888887765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (173 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       354  (0.0197445); expected 358.6 (0.02)
Passed bias filter:                      277  (0.0154498); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.35
# Mc/sec: 1462.91
//
Query:       KHJ35194.1  [L=304]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   12.8   0.0       0.36   11.3   0.1    1.8  2  GP68      Phage protein Gp68


Domain annotation for each model (and alignments):
>> GP68  Phage protein Gp68
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.52   9.3e+03      15      32 ..     187     206 ..     183     217 .. 0.65
   2 ?   11.3   0.1     2e-05      0.36       7      63 ..     246     302 ..     243     304 .] 0.91

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.52
        GP68  15 aphet..agvlrmrraGykG 32 
                 aph+t  a  +   r G++G
  KHJ35194.1 187 APHKTwiAFFIDTPRVGFRG 206
                 88888434455566777776 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 2e-05
        GP68   7 hpslrspiaphetagvlrmrraGykGaailkllklrGtrlvnqmqraldaetaaara 63 
                   s r  +  +   ++ r  raG   ++ lk+ +  G r  + + ra+ ae +aa a
  KHJ35194.1 246 CGSTRHAQEDYSHKCLARPTRAGNPTKEQLKVYRKAGDREYQVVLRAIAAEAKAAIA 302
                 56778888889999**************************************99866 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       644  (0.0359195); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2261.17
//
Query:       KHJ35195.1  [L=211]
Description: hypothetical protein EV44_g3845 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.067   12.9   0.0      0.092   12.5   0.0    1.2  1  RestrictionMunI  Type II restriction enzyme MunI


Domain annotation for each model (and alignments):
>> RestrictionMunI  Type II restriction enzyme MunI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0   5.1e-06     0.092      72     142 ..      86     158 ..      62     169 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 5.1e-06
  RestrictionMunI  72 ikkhgispdfaidntkt.gkilyveikrqdgwvegkdrsagrgnaherlcklftp.glleklrnigkiedevl 142
                        ++gi pd    n++t  k  y  +kr+d  v  k   ag+ n      kl +  g ++ +  ig+i  ++l
       KHJ35195.1  86 QVLQGIMPDSGALNLSTiSKAQYLALKREDPSVHLKTSNAGQANIQFGPGKLVSSiGAVNLVTAIGNITFHIL 158
                      4567*****99999887579************************98888887653377777777777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (211 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       595  (0.0331865); expected 358.6 (0.02)
Passed bias filter:                      519  (0.0289475); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1561.20
//
Query:       KHJ35196.1  [L=71]
Description: putative glucose repressible protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-28   98.7  11.8    1.8e-28   98.5  11.8    1.0  1  Grg1      Glucose-repressible protein Grg1


Domain annotation for each model (and alignments):
>> Grg1  Glucose-repressible protein Grg1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.5  11.8     1e-32   1.8e-28       1      67 []       1      67 [.       1      67 [. 0.99

  Alignments for each domain:
  == domain 1  score: 98.5 bits;  conditional E-value: 1e-32
        Grg1  1 MdtiknaanyVsekvqgataeaskeanKevaKdsnasigdRasAakdavsDKidekkhdakAeanKe 67
                MdtiknaanyVse+vqga++eask +nK vaKd +as+g+Ra+A kda+ DK+de +h+akA+++Ke
  KHJ35196.1  1 MDTIKNAANYVSESVQGAGSEASKDTNKKVAKDGDASLGSRATALKDAAVDKKDELSHNAKADVHKE 67
                9*****************************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (71 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      161  (0.00897987); expected 358.6 (0.02)
Passed Vit filter:                         7  (0.000390429); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.21s 00:00:00.57 Elapsed: 00:00:00.38
# Mc/sec: 560.09
//
Query:       KHJ35197.1  [L=146]
Description: hypothetical protein EV44_g1747 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0048   16.7   0.5     0.0062   16.4   0.5    1.1  1  DUF4718   Domain of unknown function (DUF4718)


Domain annotation for each model (and alignments):
>> DUF4718  Domain of unknown function (DUF4718)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   0.5   3.4e-07    0.0062      41     108 ..      49     116 ..      41     134 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 3.4e-07
     DUF4718  41 eskfkeidervkqrsskaklkahsqcvfisrnfhtGrlqlqeekrkkeeaeikaikdhskeefcladk 108
                 +  ++ ++e+ + +  +ak+    +cv+     ++ ++q  +e++kk ++e+ka    sk ++++++ 
  KHJ35197.1  49 SIYYQGMEEEEEDNQEEAKVNDDDNCVMEVGHVYAHNFQPVQEQHKKYHSELKAHETISKWNYQTMNG 116
                 555777889999999999*********************************************98764 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (146 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1251  (0.0697752); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.20s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 1225.80
//
Query:       KHJ35198.1  [L=491]
Description: putative family methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-08   34.9   0.0    2.2e-08   34.0   0.0    1.4  1  Methyltransf_31  Methyltransferase domain
    7.5e-07   28.8   0.0    1.5e-06   27.9   0.0    1.4  1  MTS              Methyltransferase small domain
    2.4e-05   23.8   0.0    4.3e-05   22.9   0.0    1.3  1  N6_Mtase         N-6 DNA Methylase
    0.00012   22.7   0.0    0.00027   21.6   0.0    1.6  1  Methyltransf_25  Methyltransferase domain
    0.00032   21.2   0.1    0.00083   19.9   0.1    1.8  1  PrmC_N           PrmC N-terminal domain
     0.0014   18.5   0.0     0.0033   17.3   0.0    1.5  2  Methyltransf_23  Methyltransferase domain
     0.0021   18.8   0.0     0.0051   17.5   0.0    1.7  1  Methyltransf_12  Methyltransferase domain
  ------ inclusion threshold ------
      0.014   15.1   0.0      0.055   13.2   0.0    2.0  2  UPF0020          Putative RNA methylase family UPF0020
      0.018   14.5   0.0      0.044   13.3   0.0    1.6  2  CheR             CheR methyltransferase, SAM binding domain
        0.2   11.0   0.0       0.34   10.3   0.0    1.3  1  PrmA             Ribosomal protein L11 methyltransferase (Prm


Domain annotation for each model (and alignments):
>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.0   1.2e-11   2.2e-08       5      84 ..     141     231 ..     139     301 .. 0.80

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 1.2e-11
  Methyltransf_31   5 lrvlDlGCGtGeltfelae.....elgp.kaevvGiDiseeaielAre.........naqklgld..nveFeqgdieeleklledekfDlilsn 81 
                      +r+lD+ +GtG++t+ l +     e ++ ++ + GiDis++a++lAre         ++ +      n++Feq di+e +  ++ +  D+i+sn
       KHJ35198.1 141 IRILDACSGTGAITLLLCSallkkETYSsDILILGIDISPKAVNLAREnlcwnknlgHLPNF--AgrNIRFEQRDIFE-D--YH-RGWDIIVSN 228
                      689****************7766644434666****************76665533333333..266***********.5..55.89*****99 PP

  Methyltransf_31  82 evl 84 
                       + 
       KHJ35198.1 229 PPY 231
                      554 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.0   8.1e-10   1.5e-06      34     118 ..     142     242 ..     135     247 .. 0.78

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 8.1e-10
                 EEEEET-TTSHHHHHH.....HHHTTC.E..EEEEESBHHHHHHHHHHHHHTTGC..........EEEEE-STTTTSTTS-EEEEEE---STTTCHCHH CS
         MTS  34 kvlDlGcGaGvlgaal.....akespeae..vtlvdvdarAlesakenleankle..........vevvasdvleeveekkfdlivsNPPfhagkatel 115
                 ++lD ++G+G++++ l     +ke+ + +  +  +d++ +A+++a+enl  nk            +++ ++d++e+ + +  d+ivsNPP+ +++a ++
  KHJ35198.1 142 RILDACSGTGAITLLLcsallKKETYSSDilILGIDISPKAVNLARENLCWNKNLghlpnfagrnIRFEQRDIFEDYH-RGWDIIVSNPPYISHSAYDH 239
                 69*********987651111133333333237789*************977764445778889999************.************99999888 PP

                 HHH CS
         MTS 116 ava 118
                 ++ 
  KHJ35198.1 240 EIN 242
                 775 PP

>> N6_Mtase  N-6 DNA Methylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.9   0.0   2.4e-08   4.3e-05      49     153 ..     142     250 ..     135     262 .. 0.70

  Alignments for each domain:
  == domain 1  score: 22.9 bits;  conditional E-value: 2.4e-08
    N6_Mtase  49 svyDpacGsggllvqaekvlkeedgktkelsiyGqeknettyrLakmNlllhgieykkvkirlgdtlekpkfe....kdkkfdvvvaNppfnqk.ewke 142
                  ++D ++G+g++ +   + l +++   +++ i G ++ +++++La+ Nl+      + +    g  +  ++ +     ++  d++v+Npp+ ++  +++
  KHJ35198.1 142 RILDACSGTGAITLLLCSALLKKETYSSDILILGIDISPKAVNLARENLCWNKNLGH-LPNFAGRNIRFEQRDifedYHRGWDIIVSNPPYISHsAYDH 239
                 59********99888777788899999*********************997655444.33333333332222223356778**********66514555 PP

    N6_Mtase 143 ktlekderfre 153
                 + + +   f+ 
  KHJ35198.1 240 EINRSVRNFEP 250
                 54444445555 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   1.5e-07   0.00027       1      76 [.     143     234 ..     143     249 .. 0.70

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 1.5e-07
                      EEEET-TTSHHHHHHHCTS......T.SSEEEEEESSHHHHHHHHHHHHH.TTT..........TEEEEESBC.CGBSSSTTTEEEEEEEST.G CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrl......g.kakvtgvDiseemleaareraee.egl..........nvefvqgda.edlpfedgsfDlvvssga.l 74 
                      +Ld++ GtG +tl l  +l      + +  ++g+Dis+++++ are++   +            n++f+q d+ ed++   +  D++vs+   +
       KHJ35198.1 143 ILDACSGTGAITLLLCSALlkketySsDILILGIDISPKAVNLARENLCWnK-NlghlpnfagrNIRFEQRDIfEDYH---RGWDIIVSNPPyI 232
                      8***********9999886665433257889**************8886532.2344566677799999999844443...5678888865444 PP

                      GG CS
  Methyltransf_25  75 hh 76 
                      +h
       KHJ35198.1 233 SH 234
                      44 PP

>> PrmC_N  PrmC N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.9   0.1   4.6e-07   0.00083      49      71 .]      55      77 ..      23      77 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 4.6e-07
      PrmC_N 49 qlerfeelierRaarePlqyIlG 71
                +  ++  l++rRa +ePlqyIlG
  KHJ35198.1 55 AKLKLYTLVKRRACGEPLQYILG 77
                4557889***************9 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   1.9e-06    0.0033      20      89 ..     127     228 ..     111     233 .. 0.74
   2 ?   -3.6   0.0       4.9   8.8e+03      44      62 ..     285     307 ..     276     341 .. 0.61

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 1.9e-06
  Methyltransf_23  20 lragg..........rvLdiGcGtG.illevl....rengf....svtgvDlspeaveiae..................kakkaqkdqfdeqea 76 
                      +++++          r+Ld   GtG i+l ++    +++ +     + g+D+sp+av++a+                  ++++ q d f     
       KHJ35198.1 127 KFTPKeggrqyppriRILDACSGTGaITLLLCsallKKETYssdiLILGIDISPKAVNLARenlcwnknlghlpnfagrNIRFEQRDIF----- 215
                      444445555555556**********66655555445445445544577*************9999999999999998888888888888..... PP

  Methyltransf_23  77 aepqgkfdlIvlr 89 
                      ++  + +d+Iv++
       KHJ35198.1 216 EDYHRGWDIIVSN 228
                      7777788888765 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 4.9
  Methyltransf_23  44 gfsvtgvDlspeaveiae....k 62 
                      + +v ++++s++a++i+      
       KHJ35198.1 285 VSKVLLMEISDVAQAIRVvniiD 307
                      34777788887777776544441 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   2.9e-06    0.0051       1      87 [.     144     246 ..     144     251 .. 0.70

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 2.9e-06
  Methyltransf_12   1 LeiGcGtGsllrallekl.......pdieytgvDispsaiedakeklakrennnn......nnvelealdlldldgg....ssfDlvvas.nvl 76 
                      L+  +GtG+++  l+ +l       +di ++g+Disp+a++ a+e l  ++n+ +       n+++e++d+            +D++v++   +
       KHJ35198.1 144 LDACSGTGAITLLLCSALlkketysSDILILGIDISPKAVNLARENLCWNKNLGHlpnfagRNIRFEQRDI-----FedyhRGWDIIVSNpPYI 232
                      5677899999999998888999******************9999999887765431111113444444444.....2555579***99987666 PP

  Methyltransf_12  77 hhl...kdirevld 87 
                      +h     +i+++++
       KHJ35198.1 233 SHSaydHEINRSVR 246
                      66645555555555 PP

>> UPF0020  Putative RNA methylase family UPF0020
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0         2   3.5e+03     164     190 ..      21      47 ..      11      51 .. 0.86
   2 ?   13.2   0.0   3.1e-05     0.055      73     131 ..     164     231 ..     121     244 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 2
                 EEEESSHHHHHCC---ESEEEEEEETT CS
     UPF0020 164 lltsenkalekaleeralrkvkeknvk 190
                 ++++++++l +a++e ++ k +++n+k
  KHJ35198.1  21 VILQATRCLPSAINELRWLKNHVQNIK 47 
                 7889999********999999999875 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 3.1e-05
                 HH...HH--EEEEES-HHHHHHHHHHHH.HTT-.......GGGEEEEE--GGG--STTS---EEEE---- CS
     UPF0020  73 ar...aelklygsDldrrvvqgareNae.kagv.......gdliefsqadaakLrlkegevdvivtnpPY 131
                 ++    ++ + g+D+ +++v+ areN+  + ++       g  i f+q d+ +    +   d+iv+npPY
  KHJ35198.1 164 KEtysSDILILGIDISPKAVNLARENLCwNKNLghlpnfaGRNIRFEQRDIFE--DYHRGWDIIVSNPPY 231
                 2222356669****************852444400111113445555555542..334469********* PP

>> CheR  CheR methyltransferase, SAM binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   2.4e-05     0.044      31      95 ..     139     201 ..     120     216 .. 0.81
   2 ?   -2.7   0.0         2   3.5e+03     118     141 ..     205     226 ..     201     228 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 2.4e-05
                 SSEEEEEES-TTTHHHHHHHHHHHCHSTTTSSS-EEEEEEESSCHHHHHHHHTEEECCHHTTS-H CS
        CheR  31 krvriwsagcssGeEpYslAmllketlpkaaklkvkilAtDidlkvlekAkagvykeeeleglse 95 
                  r+ri+ a +++G  +  l  +l ++  +  + ++ il++Di+ k+++ A++    +++l +l++
  KHJ35198.1 139 PRIRILDACSGTGAITLLLCSALLKK--ETYSSDILILGIDISPKAVNLARENLCWNKNLGHLPN 201
                 789**********9999888888884..444446*****************99888887777765 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2
                 TTEEEEE--TTT-SGGG--EEEEE CS
        CheR 118 elvkFeklnllekksvlgklDvif 141
                 ++++Fe+ +++e  ++++  D+i+
  KHJ35198.1 205 RNIRFEQRDIFE--DYHRGWDIIV 226
                 6899******99..8889999997 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00019      0.34     169     233 ..     149     228 ..     137     229 .. 0.59

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00019
        PrmA 169 GtGSGiLaiaaakLgakk......vvavDiDevAvkvakeNaelN.......kvea.klevalseellk..eekadvivaN 233
                 GtG+  L + +a+L  ++      ++++Di + Av+ a+eN+  N       + +  +++ + ++++++  ++  d+iv+N
  KHJ35198.1 149 GTGAITLLLCSALLKKETyssdilILGIDISPKAVNLARENLCWNknlghlpNFAGrNIR-FEQRDIFEdyHRGWDIIVSN 228
                 55555566666666655333333389****************999433322211111111.23444444445566777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (491 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       460  (0.0256568); expected 358.6 (0.02)
Passed bias filter:                      389  (0.0216967); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3664.06
//
Query:       KHJ35199.1  [L=515]
Description: hypothetical protein EV44_g3383 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    0.00046   19.8   1.5    0.00093   18.9   1.5    1.5  1  zf-CCHC_5    GAG-polyprotein viral zinc-finger
     0.0015   18.5   5.4     0.0025   17.8   5.4    1.3  1  zf-CCHC      Zinc knuckle
     0.0045   16.9   0.9     0.0097   15.9   0.9    1.5  1  zf-CCHC_3    Zinc knuckle
  ------ inclusion threshold ------
       0.01   15.5   0.6      0.023   14.3   0.6    1.5  1  BAR          BAR domain
      0.027   14.8   2.6       0.11   12.8   1.8    2.3  2  KxDL         Uncharacterized conserved protein
      0.086   12.2   2.2       0.16   11.3   2.2    1.4  1  Tropomyosin  Tropomyosin
       0.34   10.8   4.9       0.59   10.0   4.9    1.3  1  zf-CCHC_2    Zinc knuckle
        2.3    8.5   5.0        2.5    8.4   2.4    2.3  2  XhlA         Haemolysin XhlA


Domain annotation for each model (and alignments):
>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.9   1.5   4.1e-07   0.00093       2      21 ..     453     472 ..     452     476 .. 0.91

  Alignments for each domain:
  == domain 1  score: 18.9 bits;  conditional E-value: 4.1e-07
                 --B-TTT-SSBS-TTT---S CS
   zf-CCHC_5   2 pglCpRCkkgkHwardChsk 21 
                 ++ C RC+k  Hw ++C  k
  KHJ35199.1 453 ENKCYRCGKSGHWTNNCNVK 472
                 799**************877 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   5.4   1.1e-06    0.0025       1      16 [.     454     469 ..     454     470 .. 0.94

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 1.1e-06
                 SCTSSSSSSSSTTTTS CS
     zf-CCHC   1 rkCynCGepGHiardC 16 
                 +kCy+CG+ GH+ ++C
  KHJ35199.1 454 NKCYRCGKSGHWTNNC 469
                 59*************9 PP

>> zf-CCHC_3  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.9   4.3e-06    0.0097       5      27 ..     454     474 ..     451     485 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 4.3e-06
   zf-CCHC_3   5 aaCQkClkkGHwtYECknagerk 27 
                   C +C+k GHwt  C    ++ 
  KHJ35199.1 454 NKCYRCGKSGHWTNNCNV--KKN 474
                 57**************94..333 PP

>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.6     1e-05     0.023      15      64 ..      22      71 ..      14      98 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1e-05
         BAR 15 kvgkaekTkLDedFeelerrldvteklieklvkelkeylqanpgarakqi 64
                 + ++ ++k+ ++Fe++e+r+++ e+ +++++ +lk+ ++a+  +++ q 
  KHJ35199.1 22 EFQNGMEKKMNSRFEKMEDRFKKNENSMDEIMGQLKNITSALSDLKTNQD 71
                4666677788***************************9999887777665 PP

>> KxDL  Uncharacterized conserved protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.1      0.19   4.2e+02      27      54 ..       4      31 ..       2      32 .. 0.91
   2 ?   12.8   1.8   4.7e-05      0.11      36      77 ..      28      69 ..      12      73 .. 0.87

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.19
        KxDL 27 kknreLlelnalsqerlaklrarfkqgt 54
                k+n eL+ +++ ++  l+++++ +++++
  KHJ35199.1  4 KTNLELESIIKGMEVTLKEFQNGMEKKM 31
                89*******************9998876 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 4.7e-05
        KxDL 36 nalsqerlaklrarfkqgtkllkevkkdLesifkkirslkak 77
                 +++++r++k+++rfk++ + + e+  +L++i++ ++ lk++
  KHJ35199.1 28 EKKMNSRFEKMEDRFKKNENSMDEIMGQLKNITSALSDLKTN 69
                57899**********************************985 PP

>> Tropomyosin  Tropomyosin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   2.2   7.1e-05      0.16     124     172 ..      30      78 ..       8      84 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 7.1e-05
  Tropomyosin 124 vvesdLeraeeraeaaeskiveLeeeLkvvgnnlksLevseekasered 172
                   ++s +e+ e+r +++e+ + e++ +Lk+++  l +L+ +++k   +e 
   KHJ35199.1  30 KMNSRFEKMEDRFKKNENSMDEIMGQLKNITSALSDLKTNQDKGKGKET 78 
                  467889*************************************999885 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   4.9   0.00026      0.59       5      19 ..     455     469 ..     455     469 .. 0.94

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00026
   zf-CCHC_2   5 vChiCgkkGHyIqdC 19 
                 +C +Cgk+GH+ ++C
  KHJ35199.1 455 KCYRCGKSGHWTNNC 469
                 699********9999 PP

>> XhlA  Haemolysin XhlA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0         1   2.2e+03      29      46 ..       8      25 ..       3      28 .. 0.84
   2 ?    8.4   2.4    0.0011       2.5       8      48 ..      30      70 ..      29      71 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1
        XhlA 29 eaeekiknleedlkkles 46
                e e+ ik +e +lk++++
  KHJ35199.1  8 ELESIIKGMEVTLKEFQN 25
                67999********99886 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0011
        XhlA  8 rietkldnleervdkleekaaeaeekiknleedlkklesnq 48
                +++++ +++e+r +k e+ ++e   ++kn++  l++l+ nq
  KHJ35199.1 30 KMNSRFEKMEDRFKKNENSMDEIMGQLKNITSALSDLKTNQ 70
                78999**********************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1505  (0.0839422); expected 358.6 (0.02)
Passed bias filter:                      851  (0.047465); expected 358.6 (0.02)
Passed Vit filter:                       109  (0.00607954); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.64u 0.25s 00:00:00.89 Elapsed: 00:00:00.39
# Mc/sec: 3913.66
//
Query:       KHJ35200.1  [L=929]
Description: putative popld domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-67  227.6  16.0    1.4e-67  227.6  16.0    1.8  2  POP1      Ribonucleases P/MRP protein subunit POP1
    1.1e-26   93.0   0.1    4.1e-26   91.1   0.1    2.1  1  POPLD     POPLD (NUC188) domain


Domain annotation for each model (and alignments):
>> POP1  Ribonucleases P/MRP protein subunit POP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.6  16.0   1.6e-71   1.4e-67       1     204 [.      61     264 ..      61     265 .. 0.96
   2 ?   -4.3   0.2       1.7   1.5e+04      72      85 ..     343     355 ..     327     366 .. 0.36

  Alignments for each domain:
  == domain 1  score: 227.6 bits;  conditional E-value: 1.6e-71
        POP1   1 FvksrefEIkaleealkkskkasstraFQslPrklRRRtaSHnvkRvPkrlrarakremakdntptvearkrkkkslskrkrlrlrtakkllrlaakkk 99 
                 F++srefEIkal++ ++++kk+ s++a Q++Pr++RRRtaSHnvkR P++l++ra ++m+ +ntpt +a+krk+  +++r+rlr +takkl  l++kk 
  KHJ35200.1  61 FLRSREFEIKALQDGMQRAKKNLSKKALQKVPREMRRRTASHNVKRLPRKLQKRAAKDMKFENTPTITANKRKP--RTSRARLRTETAKKLSLLSSKKI 157
                 99*********************************************************************999..88999*************88888 PP

        POP1 100 akkalaakkeekklnnkkgskdktkknklaeppkkkikylkrqkektWLpTHvwhaKRakmikr....wgfaiplsptqKcyrlthRaaksrgavawDt 194
                 ++++ +   e+ k+ +++  ++k++kn+l++ p  k +y+krq++k+WLpTH+whaKRakm+++    w+faip++pt+K+yr+thRa + rga+awD+
  KHJ35200.1 158 SSSENSD--EKCKNISTRLPRPKIRKNQLNQAPILKPRYRKRQINKNWLPTHIWHAKRAKMTNPnnplWRFAIPITPTEKSYRPTHRAGGLRGAIAWDM 254
                 8875444..57888889999******************************************************************************* PP

        POP1 195 SYmstieleg 204
                 SY+st+ leg
  KHJ35200.1 255 SYISTLCLEG 264
                 *******997 PP

  == domain 2  score: -4.3 bits;  conditional E-value: 1.7
        POP1  72 rkkkslskrkrlrl 85 
                 + + + ++++  ++
  KHJ35200.1 343 TAP-TSTNKRSPKK 355
                 222.1111222222 PP

>> POPLD  POPLD (NUC188) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.1   0.1   4.6e-30   4.1e-26       1      92 []     554     659 ..     554     659 .. 0.98

  Alignments for each domain:
  == domain 1  score: 91.1 bits;  conditional E-value: 4.6e-30
       POPLD   1 gwdlilPwgwglpfwlsLvrvg......vrvgGlrerrqlalesgkpyfPddypdtkagekeekeeeeeaeekwerkPpskRvnysklg........ig 85 
                 +w++++Pw+++lp+w+ Lv+++      +r+gGl+e +q+++e g+ yfP +y+ t++g+ +e +e+ +++++w+++P++k++++++l+        +g
  KHJ35200.1 554 TWTILAPWRCILPLWYGLVHYPlstggnPRFGGLQELQQIQFEYGSVYFPINYLATASGYSWEVQERLKNKSEWDKRPKGKKIEWDSLDlgngrigeVG 652
                 5****************************************************************************************99***99999 PP

       POPLD  86 spFacdW 92 
                   ++cd+
  KHJ35200.1 653 RGWSCDF 659
                 9***996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (929 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       845  (0.0471303); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.71u 0.28s 00:00:00.99 Elapsed: 00:00:00.44
# Mc/sec: 6382.41
//
Query:       KHJ35201.1  [L=440]
Description: putative atp-dependent rna helicase sub2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.4e-38  131.7   0.2    3.9e-38  131.0   0.2    1.4  1  DEAD        DEAD/DEAH box helicase
    2.2e-26   92.4   0.1      5e-24   84.8   0.0    2.6  3  Helicase_C  Helicase conserved C-terminal domain
    5.9e-10   39.4   0.0    1.1e-09   38.5   0.0    1.4  1  ResIII      Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.0   0.2   6.6e-42   3.9e-38       2     173 ..      81     248 ..      80     251 .. 0.94

  Alignments for each domain:
  == domain 1  score: 131.0 bits;  conditional E-value: 6.6e-42
                 HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.STSEEEEEETTSSHHHHHHHHHTT.. CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxx.. RF
        DEAD   2 diQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkky.idlrvlliiggvaardqlskldng.. 97 
                 ++Q+ +ip+++ g dvl++a+ G GKT++f++  lq++ e     ++ +li++ treLa q+ n++ +f ky  d+++ +++gg++ +++ ++l+n+  
  KHJ35201.1  81 EVQQICIPQAILGTDVLCQAKSGLGKTAVFVLTTLQQI-E-PIAGETSVLIMCHTRELAYQIKNEYARFSKYlPDVKTGVFYGGTPIQKDAETLKNKet 177
                 69************************************.4.6888889************************7779**9***************86678 PP

                 .CSEEEEEHHHHHHHHHCTSSHCTTEEEEEEETHHHHHHT.TTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHHH CS
                 .xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  98 .vdivvgtpgrlddllstgklnlsqvrflVlDEadrlldq.gfsdfinrilnqlpqitcdgklqrqvivlSATlpkdv 173
                  ++i+v+tpgrl  l+++++l+ls+++++VlDE+d++ldq ++++++++i++++       + q+qv+++SATl +++
  KHJ35201.1 178 hPHIIVATPGRLNALVRDKYLKLSSCKVFVLDECDKMLDQiDMRRDVQEIFRAT-------PTQKQVMMFSATLAQEI 248
                 8***************************************************99.......67788********9765 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.9   0.0    0.0053        32      15      73 ..     123     185 ..     110     186 .. 0.73
   2 ?   -3.5   0.0       2.2   1.3e+04      13      28 ..     231     247 ..     221     262 .. 0.63
   3 !   84.8   0.0   8.3e-28     5e-24       2     111 .]     287     395 ..     286     395 .. 0.92

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0053
                 TTSEEEEEESSHHHHHH..HHHHHHHT...TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEES CS
  Helicase_C  15 eggkilifvntidrlek..vklllekk...gikvavlhgelpqnereeileqfnkgesdvLiat 73 
                  +  +li+++t++ +++   ++ + +k   ++k+ v++g +p ++  e+l++  + + ++++at
  KHJ35201.1 123 GETSVLIMCHTRELAYQikNEYARFSKylpDVKTGVFYGGTPIQKDAETLKNK-ETHPHIIVAT 185
                 56789********666555344422225679***********99999999987.4444588887 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.2
                 TTTTSEEEEEESSHH.H CS
  Helicase_C  13 eeeggkilifvntid.r 28 
                 +  ++++++f+ t   +
  KHJ35201.1 231 TPTQKQVMMFSATLAqE 247
                 45677777777776543 PP

  == domain 3  score: 84.8 bits;  conditional E-value: 8.3e-28
                 HHHHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHHH CS
  Helicase_C   2 kleallellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnvtsy 100
                 k ++l ell  e + ++++ifv+++ r+ +++ ll++ ++ ++++h+  +q+er++  ++f++ + ++ +atd+ +rGidi+++nl in+dlp ++ sy
  KHJ35201.1 287 KNRKLNELL-DELQFNQAIIFVKSTARATELDKLLQSCNFPSVAVHSGVSQEERIRRYKAFKDFQERICVATDIFGRGIDIERINLAINYDLPPDPNSY 384
                 677888888.8899************8877555555558***********************99999******************************** PP

                 HHHHTTSSSTT CS
  Helicase_C 101 iqriGRtgRag 111
                  +r+GR+gR+g
  KHJ35201.1 385 LHRVGRAGRFG 395
                 *********86 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.0   1.9e-13   1.1e-09      27     169 ..      96     244 ..      82     246 .. 0.78

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 1.9e-13
                 EEEEESTTSTHHHHH.HHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG..........GEEEESSS-B--.......-SEEEEEHHHHHHTH CS
      ResIII  27 glikmaTGtGKTlva.aklierllkkgkeekflflvprkslleqtleefkkflseayke......igkkvsgdkkkakekdstnkkilvttiqsldads 118
                 +l ++  G GKT v  + + +++   ++e  +l+++++++l  q ++e+++f++   +        g+ +++d ++  ++++t+ +i+v+t  +l+a  
  KHJ35201.1  96 VLCQAKSGLGKTAVFvLTTLQQIEPIAGETSVLIMCHTRELAYQIKNEYARFSKYLPDVktgvfyGGTPIQKDAET-LKNKETHPHIIVATPGRLNALV 193
                 5677889********889999999999999****************999888765444433355433334444444.47899***************** PP

                 ........HHHTTT-SEEEEETGGGTTS.TTTHH.HHHT---....SEEEEEESS- CS
      ResIII 119 eeeeeeseellrdrfdviiiDEaHrlgakkswre.ilekfke....avllglTATp 169
                       ++ l+ ++ +v++ DE+ ++ ++  +r+ + e f++    + ++ ++AT+
  KHJ35201.1 194 -----RDKYLKLSSCKVFVLDECDKMLDQIDMRRdVQEIFRAtptqKQVMMFSATL 244
                 .....88888889999************9544444555554444447778899*97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (440 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       611  (0.0340789); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 3398.87
//
Query:       KHJ35202.1  [L=585]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1125  (0.0627475); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 4255.91
//
Query:       KHJ35203.1  [L=443]
Description: hypothetical protein EV44_g5490 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    0.00028   20.8   2.1    0.00028   20.8   2.1    1.6  2  zf-CCHC    Zinc knuckle
  ------ inclusion threshold ------
        0.2   11.5   1.4       0.38   10.6   1.4    1.4  1  zf-CCHC_2  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.2   1.1e+04       9      14 ..     258     263 ..     257     263 .. 0.83
   2 !   20.8   2.1   3.2e-08   0.00028       3      18 .]     364     379 ..     363     379 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.2
                 SSSTTT CS
     zf-CCHC   9 pGHiar 14 
                 + H++r
  KHJ35203.1 258 EEHYSR 263
                 78**98 PP

  == domain 2  score: 20.8 bits;  conditional E-value: 3.2e-08
                 TSSSSSSSSTTTTSTS CS
     zf-CCHC   3 CynCGepGHiardCpk 18 
                 C +CG+ GH++r C++
  KHJ35203.1 364 CTRCGQLGHYSRSCTN 379
                 **************96 PP

>> zf-CCHC_2  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   1.4   4.2e-05      0.38       6      19 ..     364     377 ..     363     377 .. 0.95

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 4.2e-05
   zf-CCHC_2   6 ChiCgkkGHyIqdC 19 
                 C +Cg+ GHy ++C
  KHJ35203.1 364 CTRCGQLGHYSRSC 377
                 **********9999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (443 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      445  (0.0248201); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.24s 00:00:00.76 Elapsed: 00:00:00.42
# Mc/sec: 3198.60
//
Query:       KHJ35204.1  [L=207]
Description: putative ribonuclease t2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.3e-42  143.3   0.7    1.1e-41  143.1   0.7    1.1  1  Ribonuclease_T2  Ribonuclease T2 family


Domain annotation for each model (and alignments):
>> Ribonuclease_T2  Ribonuclease T2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.1   0.7     6e-46   1.1e-41      29     175 ..      13     173 ..       1     191 [. 0.84

  Alignments for each domain:
  == domain 1  score: 143.1 bits;  conditional E-value: 6e-46
                      S--SS-EEEEEEEE-TTS-.--S--TTS---......GGGGGGGHHHHHHHS----SH..HHHHHHHHHTGGGGTT...T...S-S......H. CS
  Ribonuclease_T2  29 kpaedftihGLwpdnsgksypenCnssekfd......ekeisdllaelnkyWpslikk..slwkhEwekHGtCaas.lpa...lks......e. 103
                       pa+++tihGLwpdn ++syp++C+   +++      +k   +l ++++ yW  +  +  s+w hEw+kHGtC+++ +p+   + +      e 
       KHJ35204.1  13 GPANSWTIHGLWPDNCDGSYPTYCSAAPQYHnlseiiSKASPSLFEYMKIYWLPNRGSpdSFWMHEWNKHGTCVNTlAPScysE-DqyipgiEv 105
                      4679***********8889******998888765654444488*********99875588****************88885421.223333337 PP

                      HHHHHHHHHHHTT--HHHHHHHTT--S.SS-EEEHHHHHHHHHHHHSS--EEEEEE..--EEEEEEEEEEET CS
  Ribonuclease_T2 104 hkYFqkalelrkkldlkkvLakagIvPsktksyslseikdalkkaigvkpkieCskdskeqalsevelcldk 175
                      ++YFqka++l+++ld++k+L++agI P ++k+ysl+ei++ l+k++g+k+ i+C+     ++l++v++ ++ 
       KHJ35204.1 106 VEYFQKAVDLFQQLDTYKALSSAGILPRHDKTYSLKEIQETLTKVTGQKAIISCQG----TQLNQVWYSFNV 173
                      ******************************************************98....9*******9854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1514.66
//
Query:       KHJ35205.1  [L=302]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     0.0042   17.3   0.8       0.18   12.1   0.1    2.3  2  Retrotrans_gag  Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.1   0.1   9.9e-06      0.18      35      81 ..       2      50 ..       1      66 [. 0.82
   2 !    3.6   0.1    0.0046        83      47      69 ..     253     273 ..     246     289 .. 0.83

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 9.9e-06
  Retrotrans_gag 35 aflktflpserkdqleeelsslrQ.gtesvreYvtrfktladqlde.vl 81
                    +f ++f++ e++ +  e l ++rQ +++ ++++ + fk+  + +d   +
      KHJ35205.1  2 HFDEQFEDVEDMLKVAEALEQMRQgHNQYFEDFQHDFKSQYSLCDVnTW 50
                    689999999999999**************************99995533 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.0046
  Retrotrans_gag  47 dqleeelsslrQgtesvreYvtr 69 
                       ++++l+++rQ  +s reY+++
      KHJ35205.1 253 PVTKDQLKTIRQ--MSQREYHAE 273
                     567889999999..999***987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (302 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       851  (0.047465); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.24s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2282.17
//
Query:       KHJ35206.1  [L=321]
Description: putative hydroxyacylglutathione hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.9e-20   70.9   1.7    2.1e-19   69.8   1.7    1.6  1  HAGH_C         Hydroxyacylglutathione hydrolase C-terminus
    2.4e-12   47.3   0.0    1.7e-07   31.5   0.0    2.2  2  Lactamase_B    Metallo-beta-lactamase superfamily
    0.00075   19.1   0.1      0.019   14.4   0.1    2.3  1  Lactamase_B_2  Beta-lactamase superfamily domain
     0.0022   17.9   0.1      0.005   16.7   0.1    1.5  2  Lactamase_B_3  Beta-lactamase superfamily domain
  ------ inclusion threshold ------
      0.045   13.2   0.1       0.15   11.5   0.0    1.7  2  BcrAD_BadFG    BadF/BadG/BcrA/BcrD ATPase family
       0.17   11.8   0.0        2.3    8.1   0.0    2.2  2  DUF1236        Protein of unknown function (DUF1236)


Domain annotation for each model (and alignments):
>> HAGH_C  Hydroxyacylglutathione hydrolase C-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.8   1.7   6.9e-23   2.1e-19       1      80 []     205     282 ..     205     282 .. 0.94

  Alignments for each domain:
  == domain 1  score: 69.8 bits;  conditional E-value: 6.9e-23
      HAGH_C   1 EYtlsNlkFalsvepdnealkkrlkevkelrakgeptvpstladEkktNpFLRldepevqkavg.ee.vevfaaLRelKdnF 80 
                 EYt+sN++Fa sv  +++   +++k+++e+   +e+++++t+adEk++N F+R+++pevqk +g ++ +ev+++LR +K+nF
  KHJ35206.1 205 EYTKSNANFAISVL-KDKFTTNLWKFAQEN---EETQGKFTIADEKRHNLFMRVNDPEVQKVIGtSNpIEVMSKLRDMKNNF 282
                 9************8.778899999**9999...7899***************************6448*************9 PP

>> Lactamase_B  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.5   0.0   5.5e-11   1.7e-07       7      63 ..      42      98 ..      37     110 .. 0.87
   2 !   13.8   0.0   1.5e-05     0.044     125     197 .]     140     204 ..     130     204 .. 0.72

  Alignments for each domain:
  == domain 1  score: 31.5 bits;  conditional E-value: 5.5e-11
                 EEEEEE..ETTCEEEES--SCHHHHHHHHHHHHHTSGGGGEEEEE-SBSSHHHHTTGGG CS
  Lactamase_B  7 nsylie..gdggviLiDtGtsteaaraalelaalglkpkdvdavilTHlHlDHiGglgg 63
                 ++yl+     +++++iD+  + e + +++   ++   + +v+a+i+TH H DH+Gg++ 
   KHJ35206.1 42 YAYLVIddKSNEAVIIDPAHPDEVMPILK--EKINNAQINVKAIINTHCHRDHAGGNNI 98
                 577777545599***************96..*************************975 PP

  == domain 2  score: 13.8 bits;  conditional E-value: 1.5e-05
                  HECTTSTSCCEEEEEETTCCEEEECTTTSSHHCCCCCC.TTCEEE-SHCHHHHHHHHHHHHHHHCHSEEEE.SS CS
  Lactamase_B 125 vtggpghghghgvveygggkvlftGDallagetgridltlrgaevrdpsdaekyldsllklaglkaevlvp.gH 197
                   t++++  +++ v e++ ++ +ftGD+l+ g  gr+           +  ae  l+  + la l++ + v+ gH
   KHJ35206.1 140 YTPCHTRDSICWVMEDEKQRAVFTGDTLFHGGCGRFFQ---------GTAAEMNLALNKTLASLPDNTTVYpGH 204
                  58999999*********************999999877.........333333333333344444444333377 PP

>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.4   0.1   6.5e-06     0.019      30     143 ..      79     166 ..      53     181 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 6.5e-06
                    SEEEEE-SS--HHHHGGGGCCCC.C--EEEEEEEEHHHHHHCCTTCGHHHCHTTTTEEEEEE-TTSEEEECSTTEEEEEEEE-EE--CTCCE-TTT CS
  Lactamase_B_2  30 pidaVllthaHyDHlaglltlre.lrpkklplyapkgvlavleanfvylaleeepavnvheldwgesfelgdggleitatparhksgrrldrnagd 124
                     ++a++ th+H DH  g   ++   + k++p+++ k++ +v                 +++ + g+sf++g  +++ita   +  +         d
     KHJ35206.1  79 NVKAIINTHCHRDHAGGNNIMKIqPEFKEIPIIGGKDCESVQ----------------ITP-KNGHSFKVG--NINITALYTPCHTR--------D 147
                    6899***********665444443233347776544443332................222.468899998..55577765555544........4 PP

                    SEEEEEECTTEEEEEESS- CS
  Lactamase_B_2 125 tlGlriegggkrvyyigDt 143
                     + +++e++++r++++gDt
     KHJ35206.1 148 SICWVMEDEKQRAVFTGDT 166
                    8999999999999999998 PP

>> Lactamase_B_3  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.1   1.7e-06     0.005      12     114 ..      47     166 ..      41     171 .. 0.78
   2 ?   -3.4   0.0       2.6   7.7e+03     105     117 ..     196     208 ..     189     219 .. 0.68

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 1.7e-06
  Lactamase_B_3  12 let.agarilvDPf........kanlgyeppaeeaDlvlisqaledHahletlkql...aenvkvlee............geslevggleiravat 83 
                    +++ ++  +++DP           + + ++ + ++ +++ ++ + dHa  +++ ++   +++++++ +            g+s++vg+++i+a  t
     KHJ35206.1  47 IDDkSNEAVIIDPAhpdevmpiL-KEKINNAQINVKAIINTHCHRDHAGGNNIMKIqpeFKEIPIIGGkdcesvqitpknGHSFKVGNINITALYT 141
                    555257999*****666654331.556666779********************999888777777777777777777778899********99988 PP

  Lactamase_B_3  84 shdavggsergenngflleqdgltiyhlGhl 114
                           ++r+  +++++e+++ + ++ G++
     KHJ35206.1 142 PC-----HTRD-SICWVMEDEKQRAVFTGDT 166
                    87.....3444.6889999998888888886 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.6
  Lactamase_B_3 105 gltiyhlGhlahe 117
                    + t +++Gh +++
     KHJ35206.1 196 DNTTVYPGHEYTK 208
                    5667788887764 PP

>> BcrAD_BadFG  BadF/BadG/BcrA/BcrD ATPase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0       0.4   1.2e+03     100     122 ..     101     123 ..      67     134 .. 0.66
   2 ?   11.5   0.0     5e-05      0.15     119     181 ..     152     218 ..     145     235 .. 0.75

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.4
                  H-TT--EEEEEETTEEEEEEEET CS
  BcrAD_BadFG 100 lypgtrtvldigGqdskgiqidk 122
                  + p+ + +  igG d+  +qi  
   KHJ35206.1 101 IQPEFKEIPIIGGKDCESVQITP 123
                  44555567789999999999873 PP

  == domain 2  score: 11.5 bits;  conditional E-value: 5e-05
                  EEE.TTEEEEEEEESS--TTSHHHHHHHHHHHT--TT.THHHHHTT--.....S-------SHHHHHHHH CS
  BcrAD_BadFG 119 qid.kgkvenfqmndrcaageGrylgiiadelnmglr.eldglaekat.....kkarinstcavfaeael 181
                   ++ + +++ f++   + +g+Gr+++ +a e+n++l+  l++l +++t     +    ++  a fa ++l
   KHJ35206.1 152 VMEdEKQRAVFTGDTLFHGGCGRFFQGTAAEMNLALNkTLASLPDNTTvypghE---YTKSNANFAISVL 218
                  44447788899************************9625899999998875441...4444445555544 PP

>> DUF1236  Protein of unknown function (DUF1236)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.1   0.0   0.00079       2.3      28      56 ..      28      60 ..      24      68 .. 0.81
   2 ?    0.9   0.0      0.14   4.2e+02      29      47 ..     191     210 ..     187     215 .. 0.81

  Alignments for each domain:
  == domain 1  score: 8.1 bits;  conditional E-value: 0.00079
     DUF1236 28 elrpvPdevv.i.peyrYvvvnd...rtviVdpq 56
                +++ +P  +     +y+Y v++d   + vi+dp 
  KHJ35206.1 28 HIQSIPM-WKgSgDNYAYLVIDDksnEAVIIDPA 60
                6788999.555768********966678****96 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.14
     DUF1236  29 lrpvPdevvi.peyrYvvvn 47 
                 l  +Pd+ ++ p+++Y+  n
  KHJ35206.1 191 LASLPDNTTVyPGHEYTKSN 210
                 7789**988669****9776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       637  (0.035529); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.22s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2489.69
//
Query:       KHJ35207.1  [L=492]
Description: putative ribosome assembly protein rrb1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.4e-14   52.6  11.9      1e-06   29.3   0.1    4.9  5  WD40         WD domain, G-beta repeat
    9.9e-13   48.2   0.0    6.2e-12   45.6   0.0    2.4  3  CAF1C_H4-bd  Histone-binding protein RBBP4 or subunit C of CA
    1.5e-10   41.2   1.3    1.3e-05   25.4   0.3    3.6  3  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0099   14.8   1.9     0.0099   14.8   1.9    1.6  2  PALB2_WD40   Partner and localizer of BRCA2 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.14   6.1e+02       2      35 ..     246     282 ..     245     283 .. 0.60
   2 !   29.3   0.1   2.3e-10     1e-06       5      38 .]     297     332 ..     294     332 .. 0.87
   3 !    9.3   1.3    0.0005       2.3      14      38 .]     352     377 ..     341     377 .. 0.70
   4 !   16.5   0.1   2.7e-06     0.012       3      38 .]     395     432 ..     393     432 .. 0.83
   5 ?   -2.9   0.0       3.6   1.6e+04       4      28 ..     464     481 ..     462     482 .. 0.58

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.14
                 EEEEEEESSSSE.EEEEEETTSSE........EEEEETTSEEE CS
        WD40   2 qclrtltGHssv.tslafspdgaw........lasGsdDgtvr 35 
                 ++l t+++H+s  ++l+      w        l++G+ Dg ++
  KHJ35207.1 246 KPLSTIRAHKSEgYALD------WspmvssgkLITGDNDGLIY 282
                 57788888844225774......44433336667888898876 PP

  == domain 2  score: 29.3 bits;  conditional E-value: 2.3e-10
                 EEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 
                 +++tGH ss+  l++sp+   ++ s+s Dgt++iWd
  KHJ35207.1 297 KHFTGHkSSIEELQWSPSELSVFaSASSDGTIKIWD 332
                 79****888*********9998525567*******9 PP

  == domain 3  score: 9.3 bits;  conditional E-value: 0.0005
                 EEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40  14 tslafspdgaw.lasGsdDgtvriWd 38 
                 + +++s+  +  lasG dDgt  +Wd
  KHJ35207.1 352 NVMSWSHQTSHlLASGADDGTWAVWD 377
                 44445555555268999********9 PP

  == domain 4  score: 16.5 bits;  conditional E-value: 2.7e-06
                 EEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 
                 ++ ++t H  ++ts+ ++p  + + a +s D tv +Wd
  KHJ35207.1 395 PVASFTYHkEPITSIEWNPRDDSIlAVASADDTVTLWD 432
                 7889999*777*****99988886256788*******9 PP

  == domain 5  score: -2.9 bits;  conditional E-value: 3.6
                 EEEEESSSS.E.EEEEEETTSSEEEEE CS
        WD40   4 lrtltGHss.v.tslafspdgawlasG 28 
                 +++l  H + +  ++        +a+G
  KHJ35207.1 464 VKELHFH-PqIsGCV--------VATG 481
                 5666677.4584455........5665 PP

>> CAF1C_H4-bd  Histone-binding protein RBBP4 or subunit C of CAF1 complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.6   0.0   1.4e-15   6.2e-12       7      65 ..      91     153 ..      86     155 .. 0.88
   2 ?   -3.0   0.0         2   9.1e+03      30      53 ..     262     290 ..     260     294 .. 0.57
   3 ?   -2.7   0.0       1.7   7.6e+03      25      35 ..     405     415 ..     402     427 .. 0.74

  Alignments for each domain:
  == domain 1  score: 45.6 bits;  conditional E-value: 1.4e-15
                  HHHHHHHEEEEEEEE-SS--S-EEE...........-S-B---EEEEEEEE.----TT..SS-EEEEEEEEEE CS
  CAF1C_H4-bd   7 kknapfLYdmlhshslewPsLsfdw...........lPdtvsslskqrllv.Gtqtsg..keqnylyvakvsl 65 
                  +  +   Ydmlh+ + +wP+Lsfd            +P t+       + v Gtq++   +++n+l v+k s 
   KHJ35207.1  91 DLAT---YDMLHNLNSPWPCLSFDLirdnlgddrtaYPATI-------YAVaGTQAASkrEKENQLLVMKFSG 153
                  5567...******************9999999999999999.......********66669*********886 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2
                  EE-S-B--.-.EEEEE...EEE----TTS CS
  CAF1C_H4-bd  30 dwlPdtvs.s.lskqr...llvGtqtsgk 53 
                  dw P  +s + ++  +   ++v t+tsg+
   KHJ35207.1 262 DWSPMVSSgKlITGDNdglIYVTTRTSGE 290
                  66665433433333334547779999875 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 1.7
                  --S-EEE-S-B CS
  CAF1C_H4-bd  25 PsLsfdwlPdt 35 
                  P +s++w P +
   KHJ35207.1 405 PITSIEWNPRD 415
                  889999*9974 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.3     3e-09   1.3e-05      15      91 ..     277     358 ..     261     359 .. 0.80
   2 !    5.2   0.1    0.0058        26      38      72 ..     348     383 ..     343     403 .. 0.72
   3 !   11.7   0.0   5.3e-05      0.24      37      67 ..     402     433 ..     391     436 .. 0.86

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 3e-09
  ANAPC4_WD40  15 edgellvfRlngqrvwtl...eedkedsevrsLaWkpdg.klLavaysdgevrlldaesgkvvhslsvksek.avtclgWge 91 
                  +dg ++v      +vw++   + ++++s++++L+W+p++ +++a a sdg++++ d+ s+    +lsv+ ++  v+ ++W+ 
   KHJ35207.1 277 NDGLIYVTTRTSGEVWSTdekHFTGHKSSIEELQWSPSElSVFASASSDGTIKIWDVRSKSRTAALSVSVSEtDVNVMSWSH 358
                  566677766666789*99765556899**********99679***************99887777666544337******86 PP

  == domain 2  score: 5.2 bits;  conditional E-value: 0.0058
  ANAPC4_WD40  38 dsevrsLaWkpd.gklLavaysdgevrlldaesgkv 72 
                  +  v+ ++W+++  +lLa + +dg+  + d  + k 
   KHJ35207.1 348 ETDVNVMSWSHQtSHLLASGADDGTWAVWDLRQWKP 383
                  56799999*865279**********99999876554 PP

  == domain 3  score: 11.7 bits;  conditional E-value: 5.3e-05
  ANAPC4_WD40  37 edsevrsLaWkp.dgklLavaysdgevrllda 67 
                  +++ ++s++W+p d+++Lava +d +v l d 
   KHJ35207.1 402 HKEPITSIEWNPrDDSILAVASADDTVTLWDL 433
                  7899*******85789***********99885 PP

>> PALB2_WD40  Partner and localizer of BRCA2 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   1.9   2.2e-06    0.0099     298     349 ..     322     375 ..     314     377 .. 0.77
   2 ?   -3.4   0.0      0.78   3.5e+03      54     309 ..     420     433 ..     406     452 .. 0.56

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2.2e-06
  PALB2_WD40 298 vltsGaiavWdlllghct.alllpesdesWslvrWsgtdsqlla.GqkdGsvlv 349
                   + G+i +Wd+     t al ++ s+++  ++ Ws+++s+lla G  dG+  v
  KHJ35207.1 322 ASSDGTIKIWDVRSKSRTaALSVSVSETDVNVMSWSHQTSHLLAsGADDGTWAV 375
                 4567*******9876555055578899999*************95777887666 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.78
  PALB2_WD40  54 ivtacesavslWksldakqWekvytWeftevPvlqivpvpdainlvcvalGnleireirallsssedeslkqslvksGnikavlGltkrrlvsssgtlk 152
                  v++++++v+lW                                                                                       
  KHJ35207.1 420 AVASADDTVTLWD-------------------------------------------------------------------------------------- 432
                 2334445555554...................................................................................... PP

  PALB2_WD40 153 dqqveilslseeGrskekqtlmpPeetilafaeveGekdallgttvlnniviWnlktGqllkkieigesyqasvclkaysdsGllfvvlshphakeses 251
                                                                                                                    
  KHJ35207.1   - ---------------------------------------------------------------------------------------------------   -
                 ................................................................................................... PP

  PALB2_WD40 252 akkpvfkliainPktarsvevllytlPeGqtGryleGdvkdqlaaavltsGaiavWdl 309
                                                                          l
  KHJ35207.1 433 ---------------------------------------------------------L 433
                 .........................................................4 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (492 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.33s 00:00:00.89 Elapsed: 00:00:00.47
# Mc/sec: 3158.46
//
Query:       KHJ35208.1  [L=374]
Description: hypothetical protein EV44_g1947 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     0.0075   16.2   0.0      0.016   15.2   0.0    1.5  1  REPA_OB_2     Replication protein A OB domain
  ------ inclusion threshold ------
       0.15   12.1   1.0        7.1    6.8   0.1    2.5  2  F_actin_bind  F-actin binding


Domain annotation for each model (and alignments):
>> REPA_OB_2  Replication protein A OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.0   1.7e-06     0.016      12      85 ..     205     288 ..     198     298 .. 0.86

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 1.7e-06
   REPA_OB_2  12 ivDvigvvksveevseitskstekelkkreltlvDesgasvevtlWgk.......eaekfe....sseepvvalkgvkvsdFggr 85 
                 ++ +i  + s++e++ i ++ ++ +l+  el + De+++  ++ +W +        ae+++     ++++++ ++++ ++ F+g 
  KHJ35208.1 205 TCNIIVGIISITEARAIKTRRGQ-NLELIELLVGDETNSGFKINFWSNslssgkkPAESINvlyeLKTQDIILIQNMALNSFQGN 288
                 667777777999*********99.9***********************898877756665577768999*************996 PP

>> F_actin_bind  F-actin binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.1    0.0079        71       5      58 ..     135     201 ..     133     204 .. 0.71
   2 ?    6.8   0.1    0.0008       7.1      31      67 ..     296     332 ..     270     367 .. 0.72

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.0079
  F_actin_bind   5 kesiLelvelleaalsnlkesvsssq............esaqllqlldkvenlhss.Csgyvdsipp 58 
                   k++iL l+ +++++ s+  +s+ +              ++ + + ++d+++ l++  + gy+dsi p
    KHJ35208.1 135 KDKILPLSICISEQTSTTNSSINNDDdsslnssldlslSLVENIPVSDRLTDLKDIpSAGYIDSIYP 201
                   7778888888888887777777776666666667776666777788899999988636689998765 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0008
  F_actin_bind  31 esaqllqlldkvenlhssCsgyvdsipphakFaFrel 67 
                   +  + + lld+ +n+  +C++y  ++ + +k +F++l
    KHJ35208.1 296 KELTKIYLLDRYRNFGLKCTRYNGCVNNSNKIEFQNL 332
                   4456688************************999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (374 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       513  (0.0286129); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.27s 00:00:00.75 Elapsed: 00:00:00.43
# Mc/sec: 2597.59
//
Query:       KHJ35209.1  [L=574]
Description: putative pul domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.6e-54  183.0   2.8    1.1e-53  182.3   2.8    1.2  1  PUL            PUL domain
    3.8e-35  120.9   0.0    6.3e-35  120.2   0.0    1.4  1  Peptidase_C97  PPPDE putative peptidase domain
    1.7e-13   50.4   0.0    3.8e-13   49.3   0.0    1.6  1  Thioredoxin    Thioredoxin
    0.00015   21.3   0.1    0.00025   20.5   0.1    1.3  1  OST3_OST6      OST3 / OST6 family, transporter family
      0.008   16.6   2.8      0.054   13.9   0.4    3.1  3  Thioredoxin_2  Thioredoxin-like domain
  ------ inclusion threshold ------
       0.13   12.5   0.4       0.47   10.7   0.1    2.0  2  Glutaredoxin   Glutaredoxin


Domain annotation for each model (and alignments):
>> PUL  PUL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.3   2.8   3.6e-57   1.1e-53       5     276 ..     300     566 ..     298     566 .. 0.90

  Alignments for each domain:
  == domain 1  score: 182.3 bits;  conditional E-value: 3.6e-57
         PUL   5 tyllfkk.anldkllkKlkelNakllsagqkdlalsd........eela......tLeallaalessseatqlelllklltsWppedrfPalDLlRlll 88 
                 +++l++k ++l+kl  Kl++  ++     + +l++ +        e  +      +L+a++++l            +++ +++p e +f+++DL+R+ l
  KHJ35209.1 300 QPILYTKmPPLSKLKVKLGPCAEN-----DVVLEILNfissgiseE--StklpcpDLNAFSKFL------------WSAPSELPLEVLFAIVDLFRIGL 379
                 79******************9222.....33333333555555322..2467799*********............*********************** PP

         PUL  89 ldprvsayfaeeeggktissllslllssalsssapkalennrmlalRllaNlFssplgrelllskaeslletleslltssll.ssnknlrialatlllN 186
                 +dp+++ayf++e+++kt++ ++s+  ++ l +++p++l   r+++l+l +NlF +++++  +l  + sl e +++l+t+sll ++n+n+r+a+a+l++N
  KHJ35209.1 380 ADPTFNAYFTNEKDHKTVALIISH--VNCL-ENCPYSL---RLVTLQLSCNLFLNEKYQHNVL-GCASLYEPIIQLATNSLLdDKNQNVRVAAASLAFN 471
                 ************************..7767.59*****...**********************.779******************************** PP

         PUL 187 lavllhk......skde..lseedqvellaallealeeeeedsEalyRlLvAlGtlvyaapegealadlarvldakeivkkakkkafekeprvkevak 276
                 la++++k      +  +  l+e++q+el+a+llea++ ee ++Eal + L+Al +lv+ ap++++l dl++++   ei+ ++++  f+kep++ e+++
  KHJ35209.1 472 LAITNQKarfdkkN--KeiLPEAQQLELAASLLEAINAEEHSAEALKGCLLALANLVFRAPKDGELVDLLKSMASNEIILSKQN-HFPKEPLIDEIGN 566
                 *****999998533..335*******************************************666*******************.99********985 PP

>> Peptidase_C97  PPPDE putative peptidase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.2   0.0   2.1e-38   6.3e-35       2     148 ..       3     139 ..       2     142 .. 0.97

  Alignments for each domain:
  == domain 1  score: 120.2 bits;  conditional E-value: 2.1e-38
                    EEEEEEEETT...TTHHHHHHHHHHSS-----EEEEEEETTEEEE--T.....T-SEEESTT-STT-.S-SEEEEEEEE---HHHHHHHHHHHHTT CS
  Peptidase_C97   2 kvelivyDlsldkkglarrvyptllGkkieGiyhtgvevygleyafggkekeegGifelkpgttsegakpresieigeTevteeevraileelsse 97 
                     v+l++yDls   +g+a+++++ +lG++i++iyht+++++ ley +       gG+  +++g+t+ g  p +++ +g+Te++ e + ++le+l++ 
     KHJ35209.1   3 DVQLYIYDLS---NGMAKQMSLGFLGEQIDAIYHTSIVMNSLEYVY-D-----GGVKIVSAGKTHLG-PPLKTVFLGKTELPMEVILEYLESLKEI 88 
                    59********...9********************************.5.....7*********9999.**************************** PP

                    --GGG-BTTTB-HHHHHHHHHHHHHS----HHHHTHHHHHHTSHHHHHHTT CS
  Peptidase_C97  98 ytgdkYnLiskNCnhFtdelvdfLtgkkiPewinrlarivlstptvklllp 148
                    y++++Y++ ++NCn+F+++++ fL+g  iP++i +l+++vl tp++++l p
     KHJ35209.1  89 YNEKAYDIWTHNCNNFSNDFATFLVGHGIPSYISNLPETVLKTPFGQMLKP 139
                    ***********************************************9976 PP

>> Thioredoxin  Thioredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.0   1.3e-16   3.8e-13       9     101 ..     182     273 ..     174     275 .. 0.87

  Alignments for each domain:
  == domain 1  score: 49.3 bits;  conditional E-value: 1.3e-16
                  HHHHHHTT.TSSEEEEEEE-TTSHHHHCHHHHHHHHHHHCTTTSEEEEEETTTSHHHHHHTT-SSSSEEEEEETTEEEEEEESS-HHHHHHHHH CS
  Thioredoxin   9 nFeeevak.ekklvlveFyApwCghCkalaPeleklaeelkdkvklakvdvdenedlakkyevegiPtlklfkngkevkkyegarekeklaafl 101
                  + ++ +++ ++   +v F+++ Cg+Ckal P ++k a e++ +v ++ vdv ++ ++  ky++++ Pt++ f +g + ++ +g+ + ++l ++l
   KHJ35209.1 182 ELDNYLQNsQNFCAIVFFTSQNCGPCKALYPLYQKKAIEFE-EVIFLMVDVAKSIEIGMKYSITATPTFITFLHGSQESRWTGSDP-SSLHSNL 273
                  56777777334456888999*********************.9****************************************998.7777766 PP

>> OST3_OST6  OST3 / OST6 family, transporter family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.1   8.4e-08   0.00025       9     107 ..     169     257 ..     162     276 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 8.4e-08
   OST3_OST6   9 ksngviklnd..enykellkgprdysvvvllTatspqfkCelCrefepefelvakswrkdekskskklfFakvdfdegkdvFqklglnsaPhlllfppk 105
                 ++ ++++l +  ++++++l++++++  +v++T++    +C +C+ ++p +++ a  + +        ++F +vd++++ ++ +k+ ++  P ++ f   
  KHJ35209.1 169 ENRNLVHLASsvNELDNYLQNSQNFCAIVFFTSQ----NCGPCKALYPLYQKKAIEFEE--------VIFLMVDVAKSIEIGMKYSITATPTFITFLHG 255
                 346788888877899*****************99....8*********99987766654........69*************************99774 PP

   OST3_OST6 106 kg 107
                 ++
  KHJ35209.1 256 SQ 257
                 44 PP

>> Thioredoxin_2  Thioredoxin-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       3.3   9.9e+03      41      59 ..      83     102 ..      75     130 .. 0.63
   2 !   13.9   0.4   1.8e-05     0.054       9      98 ..     196     263 ..     189     268 .. 0.74
   3 ?   -1.5   0.1       1.1   3.3e+03       2      21 ..     391     411 ..     390     442 .. 0.74

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 3.3
  Thioredoxin_2  41 p.lkpsfepkavaiwcakek 59 
                      lk+ +++ka +iw+ +  
     KHJ35209.1  83 EsLKEIYNEKAYDIWTHNCN 102
                    35666677788888876654 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 1.8e-05
  Thioredoxin_2   9 lvvftdpdCpyCkklkkelkelddvtvrvllfplkpsfepkavaiwcakekkkafkdieenvelarkygvrgtPtiv.fldgkeivarlpG 98 
                    +v+ft+ +C+ Ck+l+   ++  ++++           e ++ +++ ak+            e + ky +++tPt++ fl g+    r++G
     KHJ35209.1 196 IVFFTSQNCGPCKALYPLYQKK-AIEFE----------EVIFLMVDVAKSI-----------EIGMKYSITATPTFItFLHGS-QESRWTG 263
                    899************9966666.44333..........3566666666655...........6899*********87698888.3345555 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 1.1
  Thioredoxin_2   2 kgngkpvlvvftdpdC.pyCk 21 
                    ++++k v+++++ ++C  +C 
     KHJ35209.1 391 EKDHKTVALIISHVNClENCP 411
                    578899999999999964454 PP

>> Glutaredoxin  Glutaredoxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00016      0.47       1      29 [.     196     224 ..     196     241 .. 0.87
   2 ?   -1.7   0.0       1.2   3.6e+03       7      16 ..     408     417 ..     401     419 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00016
                   EEEEESTSSHHHHHHHHHHHHTTGGEEEE CS
  Glutaredoxin   1 vvlftkptCpyCkkakrlLkelgvkfeei 29 
                   +v ft+++C+ Ck+   l +++ ++fee+
    KHJ35209.1 196 IVFFTSQNCGPCKALYPLYQKKAIEFEEV 224
                   799********************999887 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.2
                   TSSHHHHHHH CS
  Glutaredoxin   7 ptCpyCkkak 16 
                    +Cpy+ + +
    KHJ35209.1 408 ENCPYSLRLV 417
                   58****9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       475  (0.0264934); expected 358.6 (0.02)
Passed bias filter:                      390  (0.0217525); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3875.44
//
Query:       KHJ35210.1  [L=118]
Description: putative 37s ribosomal protein mrp17 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.8e-24   83.8   0.0    9.1e-24   83.5   0.0    1.1  1  Ribosomal_S6  Ribosomal protein S6


Domain annotation for each model (and alignments):
>> Ribosomal_S6  Ribosomal protein S6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.5   0.0   5.1e-28   9.1e-24       2      90 .]       3      94 ..       2      94 .. 0.97

  Alignments for each domain:
  == domain 1  score: 83.5 bits;  conditional E-value: 5.1e-28
                  EEEEEEE-TTS-HHHHHHHHHHHHHHHHHTTEEEEEEEEEEEEEEEEEETTE....EEEEEEEEEEEESCCHHHHHHHHHHCSTTEEEEEEEE CS
  Ribosomal_S6  2 YElvfilrpelseeevkelvekvgklilenggvvrkveswGkrkLaypikkk....teGyyvlmnfdaspevikelertlrldervlRylivk 90
                  YEl++i+r     +evk+l+++ g++il+ngg +r++ +wG+  L+++++k+    +eG+y++m+fd+s+++++e+++tl ld+r++R++ vk
    KHJ35210.1  3 YELIAIVRVGSL-DEVKDLARTAGSIILRNGGIIRSLSNWGRFSLPRKVHKNqavhSEGQYFIMRFDSSSKTQQEVRDTLGLDPRMIRFSSVK 94
                  ********9865.6*************************************99*************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (118 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       301  (0.0167884); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.40
# Mc/sec: 891.83
//
Query:       KHJ35211.1  [L=260]
Description: putative defective in cullin neddylation protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-30  105.8   7.0    1.9e-30  105.8   7.0    1.7  2  Cullin_binding  Cullin binding
    7.6e-10   38.5   0.2    1.2e-08   34.6   0.3    2.5  2  UBA_4           UBA-like domain


Domain annotation for each model (and alignments):
>> Cullin_binding  Cullin binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.1       0.4   3.6e+03     117     117 ..      43      43 ..       7      86 .. 0.60
   2 !  105.8   7.0   2.1e-34   1.9e-30       5     120 .]     136     253 ..     132     253 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.4
  Cullin_binding 117 F 117
                     F
      KHJ35211.1  43 F 43 
                     1 PP

  == domain 2  score: 105.8 bits;  conditional E-value: 2.1e-34
  Cullin_binding   5 kleklrkel.sdkekfkkvYeftFelakeegqksldletaielwklllkek...eatkkeelleqwieFleeekkekkaiskDtWnqlleFakkv 95 
                     ++    +++ +d + fkkvY+++F ++ke++qk+++le+ai +w+ll+++k   +a+++ ++l+ wie+l+++  ++++++kD+Wnq++eF +k 
      KHJ35211.1 136 YVFGQIQQMsTDISLFKKVYRHAFFASKESSQKAIPLENAIVYWSLLFNSKgrrWASESVDWLSLWIEYLQKN--WNRTVNKDMWNQTFEFYQKS 228
                     554455666355589*********************************988655338889**********555..99*****************9 PP

  Cullin_binding  96 kededlskYdeegAWPvliDeFvey 120
                       de+ls+++e+gAWP +iD Fv y
      KHJ35211.1 229 IVDEKLSFWSEDGAWPGVIDGFVSY 253
                     99*********************98 PP

>> UBA_4  UBA-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.3   1.3e-12   1.2e-08       2      39 ..       9      46 ..       8      50 .. 0.93
   2 ?    0.8   0.0     0.049   4.4e+02      16      32 ..      79      95 ..      75      95 .. 0.86

  Alignments for each domain:
  == domain 1  score: 34.6 bits;  conditional E-value: 1.3e-12
       UBA_4  2 eliaqFqaiTGadeekArqlLeannWdLerAislyFds 39
                +l+ +F+a+TGa e +A+++L+a+ W  ++A++ +F++
  KHJ35211.1  9 NLVTEFIALTGAPEKVAQRFLKAAAWRSDIAADNFFAN 46
                6899********************************97 PP

  == domain 2  score: 0.8 bits;  conditional E-value: 0.049
       UBA_4 16 ekArqlLeannWdLerA 32
                + ++++L+  + +Le+A
  KHJ35211.1 79 DGVMRYLQDLGVNLETA 95
                66789**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       831  (0.0463495); expected 358.6 (0.02)
Passed bias filter:                      508  (0.028334); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.25s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 2058.11
//
Query:       KHJ35212.1  [L=611]
Description: putative choline oxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.7e-50  170.6   0.0      6e-50  170.3   0.0    1.1  1  GMC_oxred_N     GMC oxidoreductase
    2.3e-35  122.3   0.0    3.8e-35  121.5   0.0    1.4  1  GMC_oxred_C     GMC oxidoreductase
    0.00013   21.1   0.0    0.00027   20.1   0.0    1.5  1  Lycopene_cycl   Lycopene cyclase protein
    0.00022   21.4   0.1    0.00083   19.5   0.0    2.0  2  NAD_binding_8   NAD(P)-binding Rossmann-like domain
    0.00039   19.6   0.0       0.68    9.0   0.0    2.2  2  FAD_binding_2   FAD binding domain
     0.0022   17.3   0.0       0.01   15.1   0.0    1.9  2  Pyr_redox_2     Pyridine nucleotide-disulphide oxidoreductase
     0.0043   16.7   0.1      0.075   12.6   0.1    2.3  2  DAO             FAD dependent oxidoreductase
  ------ inclusion threshold ------
      0.019   14.3   0.0       0.13   11.6   0.0    2.0  2  FAD_oxidored    FAD dependent oxidoreductase
      0.027   13.3   0.0       0.04   12.8   0.0    1.2  1  Trp_halogenase  Tryptophan halogenase
      0.032   14.8   0.1        2.3    8.8   0.0    2.6  2  Pyr_redox       Pyridine nucleotide-disulphide oxidoreductase
      0.084   12.1   0.0       0.25   10.5   0.0    1.8  1  Thi4            Thi4 family


Domain annotation for each model (and alignments):
>> GMC_oxred_N  GMC oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.3   0.0   3.7e-53     6e-50       1     296 []      13     305 ..      13     305 .. 0.92

  Alignments for each domain:
  == domain 1  score: 170.3 bits;  conditional E-value: 3.7e-53
  GMC_oxred_N   1 vdelveggGsagsvvAaRLse.dpstsvlvleaggreknrl.imvlalalklidkklntayetepekalngrrlilpaGktlGGgsvvNwsayiRtpa 96 
                  +d++++ggG+ag+v+A+RLs+  p++++l++e g+++ + +    l   l+l+ + l+ +y t+ +++ n+ +    ++k+lGG s+ N  +++R+ +
   KHJ35212.1  13 YDYIIVGGGTAGCVIASRLSKyLPEKKILLIEGGPSDLDNEkVLNLREWLTLLGGDLDYDYGTTEQPNGNSHIRHS-RAKVLGGCSSHNTLISFRPFE 109
                  79******************857**************9999788888999999*******************9999.********************* PP

  GMC_oxred_N  97 adldeWeeeaglegwssdevlpafkkvetaqalesdlhgvdgrlgvtekgkeesplnkallkaaee.lGlpvprdlngk......hqcGvcllgv..t 185
                   d + We+  g +gw+ +++ ++++++             ++ l+v    k+++ ++k++++ + + ++++v +d+n++       ++Gv+++    +
   KHJ35212.1 110 YDCQLWESL-GCKGWDFKTMTRLIDNLR------------NQILPV--HPKDRNQICKDWVESCSKaMNIRVIEDFNEEiketggIKEGVGFFSIayN 192
                  *********.******************............9*****..99999*********997637999999999887655664566666665559 PP

  GMC_oxred_N 186 crtgarqstarawLrpal....erpnleiltgakaekiilegrkkravGVeasdkkgtvkrlvvaakevvvaaGalnsPqlLqrSGlGkaehLkevgv 279
                   ++g r+s++ a+++p l    +r nl+ilt+a ++k+  + ++k ++GV+ + ++g+ k +v+a+ e++++aGa+ +  lL++SG+G+ ++L e+ +
   KHJ35212.1 193 PENGHRSSASVAYIHPILrgeeKRSNLTILTNAWVSKV--NLKNKTVQGVNLTLQNGN-KLTVTAKCETILCAGAVDTCRLLLLSGIGPSKQLSELSI 287
                  9**************9986655689*************..666***************.9************************************** PP

  GMC_oxred_N 280 dvvvdlp.vGknLqdHpv 296
                   +++dlp vG+nL dHp+
   KHJ35212.1 288 PIMHDLPgVGENLLDHPE 305
                  ****************95 PP

>> GMC_oxred_C  GMC oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.5   0.0   2.3e-38   3.8e-35       1     144 []     393     533 ..     393     533 .. 0.97

  Alignments for each domain:
  == domain 1  score: 121.5 bits;  conditional E-value: 2.3e-38
                  ----EEEEESTT-TCCEEEEE--TT-SHH..HHHHHHHHHHHHHHHCTSGGG.TTEECCEECCCTTTTS.HCHHCHHCHHCHHHHH-EE-S--B-TT- CS
  GMC_oxred_C   1 PesrGrvtlsssdptgaplidpnylsdpr..dlaalvealkaarkilaaaal.dvleeeltpgaaeetsdaavesdealekfvkeavltsaHplGtcr 95 
                  P+srGr++l+ssdp+ +p++d++y++dp+  d a+lv++lkaarki+ ++++ ++l +e+ pg+        v++de+l ++ ++ ++t++Hp Gt++
   KHJ35212.1 393 PRSRGRIYLTSSDPSEKPALDFRYFTDPDgyDAATLVAGLKAARKIASEKPFsNWLLREVAPGP-------LVQTDEQLSEYGRKVAHTVYHPAGTTK 483
                  99**************************999*******************9999**********.......9************************** PP

                  B-STCGC.BSB-TTSBBTT-CSEEE-SGGGSSS--SS-THHHHHHHHHHH CS
  GMC_oxred_C  96 MGadpkd.sVVDsdlrvhgvdnLrVvDaSvfPsapganptltilalAeka 144
                  MG+  ++  VVD++l++ g++ +r++Da vfP +++ np+lt+la++e+a
   KHJ35212.1 484 MGDPLDKmVVVDPELNIIGLKKVRIADAGVFPVMTSINPMLTVLAIGERA 533
                  **666669****************************************97 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0   1.7e-07   0.00027       1      36 [.      14      49 ..      14      60 .. 0.91

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 1.7e-07
  Lycopene_cycl  1 DvvviGaGpAglslAarlteakpglkvvlieaspsl 36
                   D +++G+G Ag+ +A rl +  p+ k++lie++ps 
     KHJ35212.1 14 DYIIVGGGTAGCVIASRLSKYLPEKKILLIEGGPSD 49
                   789***************9999***********986 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.5   0.0   5.1e-07   0.00083       1      28 [.      17      46 ..      17      48 .. 0.93
   2 ?   -3.3   0.0       6.8   1.1e+04      30      51 ..      92     114 ..      89     119 .. 0.61

  Alignments for each domain:
  == domain 1  score: 19.5 bits;  conditional E-value: 5.1e-07
                   EE--SHHHHHHHHHHHCC..TEEEEEE-SS CS
  NAD_binding_8  1 IvGaGlsGlvaAylLaka..gfdvlllekr 28
                   IvG+G +G+v+A++L+k+   +++ll+e +
     KHJ35212.1 17 IVGGGTAGCVIASRLSKYlpEKKILLIEGG 46
                   9****************9999******976 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 6.8
                    SSSGGG-EECETT.CEECTS--- CS
  NAD_binding_8  30 rlGGraasyevpg.vrvdygahi 51 
                     lGG+++ +++   ++++y  + 
     KHJ35212.1  92 VLGGCSSHNTLISfRPFEYDCQL 114
                    57888888777333666665555 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00042      0.68       1      32 [.      14      47 ..      14      50 .. 0.88
   2 !    8.6   0.0   0.00053      0.86     142     204 ..     204     267 ..     132     289 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00042
                   SEEEE--SHHHHHHHHHHHH..TTT-EEEEESSS CS
  FAD_binding_2  1 DviViGsGlAGLaAAleaae..aGlkvavvekeq 32
                   D i++G+G AG++ A ++++    +k++++e ++
     KHJ35212.1 14 DYIIVGGGTAGCVIASRLSKylPEKKILLIEGGP 47
                   88****************9987778999998876 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00053
                    HHHHHHHHHHHTCT.EEEEESEEEEEEEECTTEEEEEEEEETTTTCEEEEEES.EEEE-----GG CS
  FAD_binding_2 142 allarlvesarkag.vdfqerteadeLivedgrvtGavvenpesgrevrirak.avvlatgGfgr 204
                    a +++ +++ +k+  +++++++ + +++ +++ v G+ ++ +++g++ +++ak  ++l +g++  
     KHJ35212.1 204 AYIHPILRGEEKRSnLTILTNAWVSKVNLKNKTVQGVNLT-LQNGNKLTVTAKcETILCAGAVDT 267
                    567777777777777************************9.9*******************9875 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   6.2e-06      0.01       1      37 [.      13      57 ..      13      71 .. 0.81
   2 ?   -1.1   0.0      0.54   8.8e+02     196     226 ..     217     254 ..     193     286 .. 0.53

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 6.2e-06
                 CSEEEE--SHHHHHHHHHHHHH..TS-EEEEE......TTHCHHH CS
                 xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxx......xxxxxxx RF
  Pyr_redox_2  1 kdvvviGgGpAGlaaaltlaqa..gakvtlve......legtcln 37
                 +d++++GgG AG+  a +l+++  + k++l+e      +++ +ln
   KHJ35212.1 13 YDYIIVGGGTAGCVIASRLSKYlpEKKILLIEggpsdlDNEKVLN 57
                 689******************555*******76666655555555 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.54
                  TTEEEEESCEEEEEEETTE...EEEEEETTSCE....E CS
                  xxxxxxxxxxxxxxxxxxx...xxxxxxxxxxx....x RF
  Pyr_redox_2 196 eGvevklgtsvkeidgnge...klevvledgee....i 226
                  ++ ++ +++ v +++ +++    + ++l++g++     
   KHJ35212.1 217 SNLTILTNAWVSKVNLKNKtvqGVNLTLQNGNKltvtA 254
                  34444444444444444443332224444444322221 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.6   0.1   4.6e-05     0.075       1      29 [.      14      46 ..      14      50 .. 0.88
   2 ?    1.6   0.0       0.1   1.7e+02     160     202 ..     218     264 ..     138     288 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 4.6e-05
                EEEEECTSHHHHHHHHHHHHT.T...EEEEESS CS
         DAO  1 dvviiGGGiiGlstAyeLarr.g...Vtllekg 29
                d +i+GGG +G+ +A  L++  +   ++l+e g
  KHJ35212.1 14 DYIIVGGGTAGCVIASRLSKYlPekkILLIEGG 46
                789***************99774679****987 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.1
                 T-EEEESECEEEEEEEETCEEEEE...EECTEEE.E.EEEE.EEE--GG CS
         DAO 160 Gveilegtevtgleeedgkvwgve...rttpgen.d.aada.vVnaaGa 202
                   +il+++ v +++ +++ v+gv    +  +g++ + +a++  +++aGa
  KHJ35212.1 218 NLTILTNAWVSKVNLKNKTVQGVNltlQ--NGNKlTvTAKCeTILCAGA 264
                 5789999999999888889999987431..355542355779******7 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0      0.26   4.3e+02       1      14 [.      14      27 ..      14      44 .. 0.84
   2 ?   11.6   0.0   7.8e-05      0.13      53     137 ..     157     255 ..     144     262 .. 0.73

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.26
  FAD_oxidored  1 DvvVvGGgpaGvaA 14
                  D ++vGGg+aG++ 
    KHJ35212.1 14 DYIIVGGGTAGCVI 27
                  669********864 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 7.8e-05
  FAD_oxidored  53 e...qvvtgiareflerlrqrggarlk.krskw.n.......tfepevakavleeml....aeagvtvllntrlvevekegkriesvtveskeg.rk 132
                   +   +++ +++++f e+++++gg +++     + +        +  ++  a ++ +l    +++++t+l+n+++++v+ ++k++++v++  ++g + 
    KHJ35212.1 157 ScskAMNIRVIEDFNEEIKETGGIKEGvG---FfSiaynpenGHRSSASVAYIHPILrgeeKRSNLTILTNAWVSKVNLKNKTVQGVNLTLQNGnKL 250
                   45556777889999999988777743321...21121223335677777777777779988889****************999******76667799 PP

  FAD_oxidored 133 tirAk 137
                   t++Ak
    KHJ35212.1 251 TVTAK 255
                   99998 PP

>> Trp_halogenase  Tryptophan halogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   2.4e-05      0.04       3      32 ..      16      44 ..      14      47 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.4e-05
                    EEE--SHHHHHHHHHHHHHTTTSSEEEEEE CS
  Trp_halogenase  3 vivGGGtaGwlaAaalakalkgklevtlve 32
                    +ivGGGtaG + A+ l+k+l +  +++l+e
      KHJ35212.1 16 IIVGGGTAGCVIASRLSKYLPE-KKILLIE 44
                    7*******************66.8999998 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   0.0    0.0014       2.3       3      33 ..      16      48 ..      14      61 .. 0.81
   2 ?    3.1   0.1     0.084   1.4e+02      51      79 ..     215     243 ..     204     248 .. 0.83

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.0014
                EEECSSHHHHHHHHHHHHTT..SEEEEEESSSS CS
   Pyr_redox  3 vvvGgGyiglElAgalaelg..kkVtvversdk 33
                ++vGgG+ g+  A+ l+++   kk+ ++e ++ 
  KHJ35212.1 16 IIVGGGTAGCVIASRLSKYLpeKKILLIEGGPS 48
                79**************99754577777776665 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.084
                 HHTTEEEECSEEEEEEEEETTSEEEEEEE CS
   Pyr_redox  51 ekngievllntkveeiegsedgvesvklk 79 
                 ++ + ++l+n+ v +++ ++++v++v l+
  KHJ35212.1 215 KRSNLTILTNAWVSKVNLKNKTVQGVNLT 243
                 45599************999999999885 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0   0.00015      0.25      17      48 ..      12      44 ..       3      48 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00015
                EEEEEEE--SHHHHHHHHHHHHC.TTS-EEEEE CS
        Thi4 17 esDvvivGaGssGLtaayylakk.pdlkvaile 48
                + D +ivG+G++G   a  l+k  p+ k++++e
  KHJ35212.1 12 DYDYIIVGGGTAGCVIASRLSKYlPEKKILLIE 44
                6799****************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (611 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      405  (0.0225891); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.62u 0.28s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 4066.05
//
Query:       KHJ35213.1  [L=530]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.011   15.7   1.2      0.016   15.3   0.2    1.8  2  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1      0.52   9.3e+03       8      13 ..     216     221 ..     216     222 .. 0.79
   2 ?   15.3   0.2   8.8e-07     0.016       2      17 ..     439     454 ..     438     455 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.52
                 SSSSTT CS
     zf-CCHC   8 epGHia 13 
                 + GH++
  KHJ35213.1 216 QKGHQK 221
                 68**97 PP

  == domain 2  score: 15.3 bits;  conditional E-value: 8.8e-07
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +C nC +++Hi  dC+
  KHJ35213.1 439 ACENCSSTMHIVTDCK 454
                 7**************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (530 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       924  (0.0515366); expected 358.6 (0.02)
Passed bias filter:                      616  (0.0343577); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 3880.79
//
Query:       KHJ35214.1  [L=465]
Description: hypothetical protein EV44_g5794 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.14   11.6   0.3       0.22   11.0   0.3    1.2  1  CotH      CotH kinase protein


Domain annotation for each model (and alignments):
>> CotH  CotH kinase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.3   1.2e-05      0.22     210     288 ..      26     103 ..      20     124 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 1.2e-05
        CotH 210 DlDnafgrtedeskaetrdepeegganpeenvLfrrlldnpefrerlkarleelldgvlseerleakidalhaliapel 288
                 D++ a ++ + +s++  +++  + ++  ++  L r+ ++++++++++ ++l e+  +++ e++++ +i+ l+a +a+ l
  KHJ35214.1  26 DFNKANSSSTTSSQTAGAERSVFKTTEDAFEELQRNSIRREAIAKEYSKALDEVT-DRMREAKMNDQIEGLTAAFAQVL 103
                 78888888888666666888888889999999***********************.*****************998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (465 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       845  (0.0471303); expected 358.6 (0.02)
Passed bias filter:                      634  (0.0353617); expected 358.6 (0.02)
Passed Vit filter:                        56  (0.00312343); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.43
# Mc/sec: 3271.45
//
Query:       KHJ35215.1  [L=855]
Description: hypothetical protein EV44_g3158 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0088   16.1   6.0     0.0088   16.1   6.0    6.6  6  DUF1664   Protein of unknown function (DUF1664)


Domain annotation for each model (and alignments):
>> DUF1664  Protein of unknown function (DUF1664)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1     0.028     5e+02      63     112 ..     197     246 ..     182     256 .. 0.69
   2 !   16.1   6.0   4.9e-07    0.0088      44     119 ..     256     337 ..     248     341 .. 0.76
   3 !    5.7   2.9   0.00081        15      37     120 ..     451     534 ..     435     538 .. 0.84
   4 ?   -1.3   2.8      0.12   2.1e+03      57     117 ..     602     664 ..     579     669 .. 0.67
   5 ?   -0.4   2.3     0.063   1.1e+03      62     119 ..     681     741 ..     667     744 .. 0.63
   6 ?   -0.9   1.1     0.086   1.5e+03      67     117 ..     768     819 ..     743     837 .. 0.53

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.028
     DUF1664  63 hLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeaveg 112
                 ++s++i++ d+k+d+ +   +  k+ +t+ ++d ++ +   e+ ++ + +
  KHJ35215.1 197 EISKNIKKQDSKIDQLSLYFNPFKDFITDYKSDAERRNAAREKFQHQIDQ 246
                 56778888888888888888888888888888877766665555554433 PP

  == domain 2  score: 16.1 bits;  conditional E-value: 4.9e-07
     DUF1664  44 esvskqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseig.......edvesvkeavegleskler 119
                 ++ +++++ +++++++ k +L+ +i ++d+kld+++ +++ i+e+v e++e+ +e +       +++  ++++++++e+kl++
  KHJ35215.1 256 TNTGENMDGIKSEMEDLKTKLE-QITKLDDKLDKVITLTHLIEENVFELKENKTESDllnlsqtNKIMVIDQLIRTIEAKLNN 337
                 67899****************6.6*************************9976543211111113455566667777777665 PP

  == domain 3  score: 5.7 bits;  conditional E-value: 0.00081
     DUF1664  37 rslsdavesvskqleqvseslaatkrhLssridrvdkkldeqkeiskeikeevtevredlseigedvesvkeavegleskleri 120
                 ++l++ + + sk  ++  + l+++  +Ls  i ++ ++lde k   ++ +++  ++ +d +e+++ ++ ++e +e+  +  ++i
  KHJ35215.1 451 KNLTSICIDESKIQNNRHSPLQEQITELSTTIPNILAQLDEIKSKFENQANQNISLTKDSEETKNSFKLISENIETQTHLFSEI 534
                 6888888888888888889999999*****************9999999999999999*********99999998866655555 PP

  == domain 4  score: -1.3 bits;  conditional E-value: 0.12
     DUF1664  57 laatkrhLssridrvdkkldeqkei..skeikeevtevredlseigedvesvkeavegleskl 117
                 + at ++L+++ ++ ++ l e +e   s+ei   +++++++ ++ +++++ + +a+++l++k 
  KHJ35215.1 602 ILATLNDLEENSNKNNNILTEINERnkSTEILTTIHDLEQKNEKQRNQLTDILTAFHDLDQKT 664
                 555555555555555555555555411345567888888888888888888888888888875 PP

  == domain 5  score: -0.4 bits;  conditional E-value: 0.063
     DUF1664  62 rhLssridrvdkkldeqkeiskeikee.v.tevredlseige.dvesvkeavegleskler 119
                  ++ ++++++dkk d  k+i +eik+  + +++  +l+++++ + e+++ +++++e+k ++
  KHJ35215.1 681 TRILQNLNELDKKSDIHKNILTEIKKTdIsADILTKLRDLSQkNEEQLSLLFKTIEEKFQH 741
                 4677899999999999999999887631313455555555431345666666777776665 PP

  == domain 6  score: -0.9 bits;  conditional E-value: 0.086
     DUF1664  67 ridrvdkkldeqkeiskei.keevtevredlseigedvesvkeavegleskl 117
                 +i+  dk+ d  + ++    ++ev++++ +  +  +   ++ +++++l++k 
  KHJ35215.1 768 EIKGADKNTDILTTLQDLSkQNEVQQLSLEEIKQADICAEILTTIHDLGAKC 819
                 5555555555555554432134555554444444444444444444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (855 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2785  (0.155335); expected 358.6 (0.02)
Passed bias filter:                      425  (0.0237046); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.99u 0.36s 00:00:01.35 Elapsed: 00:00:00.50
# Mc/sec: 5103.82
//
Query:       KHJ35216.1  [L=256]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.018   14.3   0.3      0.028   13.7   0.3    1.3  1  Opi1      Transcription factor Opi1


Domain annotation for each model (and alignments):
>> Opi1  Transcription factor Opi1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.3   1.6e-06     0.028     111     182 ..       7     100 ..       2     114 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.6e-06
        Opi1 111 esstssvdvdedrgrlrlrtktldgs.iasnresavledee.....................pallkstsssstsaaasrstsepvderdataa 182
                 +++ +  d  + r+++rl++k+l++  i+ n  ++ ++d++                       + ++ +sssts + s  t +p d+ ++t +
  KHJ35216.1   7 KRQFTMADIAKSRAKVRLKNKGLAPDlIDINAFESAINDNDspgiemideeidrliakgleaSCWANTPTSSSTSSSISVDTPKPADQTKSTPT 100
                 56667789999**************84456766666666677**************99999888888888888888888888877776655443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       599  (0.0334096); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.38
# Mc/sec: 2017.79
//
Query:       KHJ35217.1  [L=292]
Description: putative water channel [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.1e-52  176.8  11.0    6.3e-52  176.5  11.0    1.0  1  MIP       Major intrinsic protein
     0.0015   18.7   3.0     0.0015   18.7   3.0    2.2  2  TrbC      TrbC/VIRB2 family


Domain annotation for each model (and alignments):
>> MIP  Major intrinsic protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.5  11.0   7.1e-56   6.3e-52      10     227 .]      36     250 ..      27     250 .. 0.91

  Alignments for each domain:
  == domain 1  score: 176.5 bits;  conditional E-value: 7.1e-56
                 HHHHHHHHHHHHHHHHHHHHHCCCSSCSSSSTTSS..HHHHHHHHHHHHHHHHHHHHHHHCHT-S-SHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHH CS
         MIP  10 avlAEflatlllvfigvgsalnvkkkvsslaslvs..vtleavalafglalavlvylaagiSGaHlNPavTlallvarkisllrailYivaQllGaiva 106
                 a++ Efl+t+l++f+g  sa  +++k+++l+++     +l  va +fg++ av v l+  +SG+HlNPa+T++l +++ ++++ra + +v Qll +i+a
  KHJ35217.1  36 AAIGEFLGTTLFLFFGFLSAQIINSKSNELSTDGPslDQLSFVAAGFGVGAAVNVWLFYRVSGGHLNPAITIGLTLIGAVPVVRAGILVVVQLLSGILA 134
                 6799**************655566666665544334789999********************************************************* PP

                 HHHHHHHCHHHHHHTTTTSSSSSTTSSHHHHHHHHHHHHHHHHHHHHHHCSTTSSSSTCHGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH CS
         MIP 107 aallklltkglesraglfanslkpglsagqalvvEiiltfvLvlvvfaltddkrkvslgelaplaigllvaliilvgipltGaamNpArslgpavvlnk 205
                 a l +++t g        +++l +++s +q+lv+Eiilt++Lvl+vf l+ +k++++   +apl igl+++l++l++++++Ga+ NpArs+gp++v+ +
  KHJ35217.1 135 ASLAHAVTPGP----LNVQTTLGQNTSLLQGLVIEIILTATLVLTVFLLAVEKHRTT--PFAPLGIGLVLFLNVLLAAQYSGASFNPARSFGPSIVQLE 227
                 **********6....3444557899**************************999988..99************************************99 PP

                 .STTTTHHHHHHHHHHHHHHHHH CS
         MIP 206 .fedhwvylvGPliGailgalvY 227
                   ++hw+y++GP++Ga+ +++vY
  KHJ35217.1 228 fVDYHWIYWIGPVLGAVGASVVY 250
                 4589****************999 PP

>> TrbC  TrbC/VIRB2 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   1.5      0.16   1.4e+03      16      92 ..      45     120 ..      35     124 .. 0.64
   2 !   18.7   3.0   1.6e-07    0.0015      12      89 ..     122     199 ..     116     208 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.16
        TrbC  16 alalvllllaspalAqaaggdpvetvlqnivdfltgplakviatiaiivaGimlafgrls.wrtlvmvviGiviifgA 92 
                  l+l++ +l+ +   ++++ ++++++  + ++f+ +  +++++  + +++ + +  g+l+   t++  +iG+v ++ A
  KHJ35217.1  45 TLFLFFGFLSAQIINSKSNELSTDGPSLDQLSFVAA--GFGVGAAVNVWLFYRVSGGHLNpAITIGLTLIGAVPVVRA 120
                 455555555555555555556666666666667766..7777777777888877777777766666666666666655 PP

  == domain 2  score: 18.7 bits;  conditional E-value: 1.6e-07
        TrbC  12 llalalalvllllaspalAqaaggdpvetvlqnivdfltgplakviatiaiivaGimlafgrlswrtlvmvviGivii 89 
                 +l+++ +l  +l+as a+A ++g ++v+t l + ++ l+g ++ +i t  ++ + + la  + +   ++++ iG+v++
  KHJ35217.1 122 ILVVVQLLSGILAASLAHAVTPGPLNVQTTLGQNTSLLQGLVIEIILTATLVLTVFLLAVEKHRTTPFAPLGIGLVLF 199
                 6788899999*********99988****************************************99999999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       527  (0.0293937); expected 358.6 (0.02)
Passed bias filter:                      254  (0.014167); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.46u 0.26s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 2046.38
//
Query:       KHJ35218.1  [L=731]
Description: putative sec1 family superfamily protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   4.5e-119  399.3   2.1   5.4e-119  399.0   2.1    1.1  1  Sec1      Sec1 family
  ------ inclusion threshold ------
       0.11   12.1   0.1       0.28   10.9   0.1    1.6  1  DUF5484   Family of unknown function (DUF5484)


Domain annotation for each model (and alignments):
>> Sec1  Sec1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  399.0   2.1    6e-123  5.4e-119       1     575 []      25     598 ..      25     598 .. 0.83

  Alignments for each domain:
  == domain 1  score: 399.0 bits;  conditional E-value: 6e-123
                 EEEEE-HHHHHHHHTT--HHHHHTTTEEETT..T.--S-.....BTTSEEEEEE-S-HHHHHHHHHHHHSS-SBS-EEEEESS---HHHHHHHHH..S. CS
        Sec1   1 KvLvlDkelskilssvlkvsdlleegVtkieklk.krepskrealphlkaiyflrptkenidrlakdfisarrykeyhifftprlseslleglakade. 97 
                 KvLv+D++ +ki++ v+k +d+l+e++ +ie+++ +re       p+++aiy+l+p ++ +d+l++df++  ryk+ ++++++ l+ ++ +++    + 
  KHJ35218.1  25 KVLVIDESARKIIDNVVKEDDILNENIANIERIEeRREM-----NPDMDAIYLLSPLPHIVDCLMADFER-HRYKQSFLVWISPLDPQMHRRINT--Sr 115
                 9******************************99877777.....9*********************9977.9**************988888776..44 PP

                 G.GGGEE.EEE----SEEEETTEEE-S.TTHHHHSTTG.....GG.......--HHHHHHHHHHHHHHH-..--EEEE-TT-.....HHHHHHHH.... CS
        Sec1  98 evvkkvk.lkelnldfvplesdlfsln.pelplsfrdlyldndnsaleeeieslldriakgLlsvllslekkiPiirykgsa.....asmvakkladel 189
                 ++  ++  ++ + +d++p es+l++++ p    sf+ ly    n+     ++++l+++a++++ +++ l + +P++ry++++     a+ ++ +la+ +
  KHJ35218.1 116 QAKAQLAgFETISIDYFPQESQLITFRdP---WSFPILYHPACNN----LVREHLQSLAQKITGICILL-GEYPKVRYYKPRnatheAHVLCSHLANFV 206
                 5566777788****************653...4555554323344....6899*************999.77******99999****666666666666 PP

                 .......HHHHTTT...--SS--EEEEE-GGG-SSTTTS---BHHHHHHHHS--B...TEEEEEE--SS......SEEEEEE--TT..-TTHHHHTTSB CS
        Sec1 190 kekids.kknfese...ssrqrpvLiIlDRsvDlvtpllhqwTYqaliddllggl...nnnnvvleeep......keekeaelvesssDeffaelrhln 275
                 +e++d   k ++++   +sr++ ++iI+DRs+Dl +pllh++TYqa+++dll+ +   + + ++++         +eeke+e++e+  D +++e+rh +
  KHJ35218.1 207 QEELDAyAKYNSNFppqCSRPTGTIIITDRSMDLNAPLLHEFTYQAMAHDLLP-MkeaD-KIYYKTI-VnkgapdEEEKEMEISEK--DMIWVENRHRH 300
                 65555544444444455***********************************9.43322.2222222.146877888888888888..*********** PP

                 HHHHHHHHHHHHHHHHHHH.HTTT....-TTHHHHHHHHHH-GGGHHHHHHHHHHHHHHHHHHHHS-HHH.HHHHHHHHHHHH..SS--..B--..-HH CS
        Sec1 276 fgevgeklkkeakeyqeen.ekkrn.gakesiadlkkfvaklpelqeekkklskHtnlaeellkevkkrkldellelEqdlat..gesd.kkikekkvi 369
                 +++ ++kl+++++++  en ++++  g ++s++ +k+++a lp++qe+k+ +s+H+++a+e++++++++kl ++++lEq+l t  + +d +k+k  ++ 
  KHJ35218.1 301 MKDTIQKLMNDFQKFIDENpNFTNPeGESTSLNSIKDMLAGLPQFQELKEAYSLHLSMAQECMNIFESHKLPDISSLEQTLSTglD-EDfRKPK--NIA 396
                 **********************9997777******************************************************864.4777777..66* PP

                 HHHHHH..-TTS-H.HHHHHHHHHHHH...-B.-HT--GG....GGHHHHGGGGG........---.BGGG-------.........---------S.. CS
        Sec1 370 eeliad..deptseledklRLlllyslvegglkekelkellrelvqsalygleylktlrsleklgllkkrkgkksskkkss..lklikeeedeesnydl 464
                 ++li+    e++++ +d+lRL++ly++ ++g+ +++++ l    v +a    + + t+ +l+ lg  +  kg k+s++ ++  + ++ ++  ++++y  
  KHJ35218.1 397 DDLIRLldTEDITP-FDRLRLIMLYIMFRDGVIPEDIQRL----VAHAGLPPQDVETIINLDLLGAHT-TKGLKDSRSMPQgiFPRKANSMPQNEEY-- 487
                 *****997666777.8************889988888877....554533233444445555333322.2332333332336766666666666666.. PP

                 .TT-----HHHHHHHHHTTT-S-TTTS-BSS-GGGS----....----------------------S-EEEEEEEEEE-HHHHHHHHHHT...TSSSEE CS
        Sec1 465 sgvsryaPllvrlvealikgkklssespslskkdpsqees....ssslrsakktnsaskesaekkkkqrviVffvGGvTysEiralrllskqekknkei 559
                  ++sr+ P l+ ++e+l +++++++ +p++++   ++ee     +sslrsak+t++++++s+++  +qr iVf++GG+TysE ra+ ++sk   ++k+i
  KHJ35218.1 488 -SLSRFEPVLKPMLEELTRNTLDQTLFPYVKPLLDNAEEIalqsQSSLRSAKPTWARNRQSNTE-SRQRFIVFIAGGATYSESRACYEISKA--SEKDI 582
                 .6899*************************9998887777***********************9.8899*****************999984..59*** PP

                 EEEEEEE--HHHHHH. CS
        Sec1 560 iigttsilnpksflee 575
                 +++t+++++p  f+++
  KHJ35218.1 583 LLATSHMIKPALFIRQ 598
                 *************986 PP

>> DUF5484  Family of unknown function (DUF5484)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.1   3.1e-05      0.28      22      41 ..     303     322 ..     301     323 .. 0.88

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 3.1e-05
     DUF5484  22 DttkWsvnDWikfiDenGnW 41 
                 Dt +  +nD+ kfiDen n+
  KHJ35218.1 303 DTIQKLMNDFQKFIDENPNF 322
                 7778889**********996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (731 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       680  (0.0379274); expected 358.6 (0.02)
Passed bias filter:                      489  (0.0272742); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.65u 0.28s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 5031.23
//
Query:       KHJ35219.1  [L=795]
Description: hypothetical protein EV44_g2096 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (795 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1089  (0.0607396); expected 358.6 (0.02)
Passed bias filter:                      338  (0.0188521); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.64u 0.26s 00:00:00.90 Elapsed: 00:00:00.43
# Mc/sec: 5613.58
//
Query:       KHJ35220.1  [L=1633]
Description: putative vacuolar membrane-associated protein iml1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.6e-104  347.0   0.4   9.8e-104  346.5   0.4    1.3  1  IML1      Vacuolar membrane-associated protein Iml1
    2.1e-26   91.7   0.2    4.4e-26   90.7   0.2    1.6  1  DEP       Domain found in Dishevelled, Egl-10, and Pleckstrin


Domain annotation for each model (and alignments):
>> IML1  Vacuolar membrane-associated protein Iml1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  346.5   0.4  1.1e-107  9.8e-104       1     286 []     132     442 ..     132     442 .. 0.95

  Alignments for each domain:
  == domain 1  score: 346.5 bits;  conditional E-value: 1.1e-107
        IML1   1 velvfkdqylsrsdmwrls.selvetcvykgqkisflgsiratvkeiykkgkkvksgyisekTkiifRSesarvvlliqlsrEmwdfeed..gellfek 96 
                 vel+fkd+ l+r dmwrl+ sel++++v+kgqki f+g+i+++v +iy +g+k+ks+y+s++T +ifRS+sa+++lliq+s+Emw+f+++  ge++f+k
  KHJ35220.1 132 VELSFKDECLTRCDMWRLAlSELSGKVVFKGQKILFMGCIKVHVISIYLNGRKAKSAYFSSSTVPIFRSSSAKYFLLIQMSKEMWEFDSEgtGEIMFNK 230
                 8***************************************************************************************99778****** PP

        IML1  97 vvngflpelFkkWkelktkHlvtivlfsrveydekeleeeaeealked........ekgrlykDfykvvvdeessedwkeileelkkefakfkrdille 187
                 v++gflp+lFkkW++lk +Hlv+i+lf+rvey ++ ++   ++ l ++         ++r ykDf++vvv e++s +w++il +lk+ef+ f+rdi+++
  KHJ35220.1 231 VISGFLPTLFKKWAALKSEHLVSIILFTRVEYGTDITTGLVSDVLGDTyftgiescGNKRPYKDFFRVVVYEMASGSWTTILYQLKREFNLFRRDISMH 329
                 ********************************88777666666666666666654466777************************************** PP

        IML1 188 keekee..............kkkrlkgeistaaegniLeainlalnllekhyidrdLkrtgtsiivitpGtGvfevdkellkltterlldngiglDlvc 272
                 + +  +              + ++++++ s a+ gn+Leai+l++ +++ +++++dL +tg+si++itp++G+fevd+++lklt+e l++n i++Dlvc
  KHJ35220.1 330 HINFIKsrsiatseksnvasTGSHFEAQASLAMYGNVLEAIDLTCYHFTCEHTNQDLIKTGNSIVIITPCAGLFEVDHDILKLTSEMLVSNRISVDLVC 428
                 *97666889*********998899*************************************************************************** PP

        IML1 273 lskapLhsvPLfry 286
                 l ++pLhs+PLfry
  KHJ35220.1 429 LPRMPLHSAPLFRY 442
                 *************9 PP

>> DEP  Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.7   0.2   4.9e-30   4.4e-26       1      72 []    1273    1358 ..    1273    1358 .. 0.99

  Alignments for each domain:
  == domain 1  score: 90.7 bits;  conditional E-value: 4.9e-30
                  SS-SCEEECTTEEESSE-HHHHHHHHHHHHTS.SSSHHHHHHHHHHHH...............HCTSCECSSSSHCC--SSSSS-EEE CS
         DEP    1 gvklkdrrkhlktypncftGseavdWLldnld.iedreeAvalgqlLl...............dqgliehvedkhqeFrdskqafYqf 72  
                  gv++++rr+hl++y+ncf+Gs+++ WL+d+++ ie+re+Av++g +L+               + gl++hv+ +h+ Frd+ q+fYq+
  KHJ35220.1 1273 GVRMQNRRWHLRLYNNCFIGSDMTTWLIDKFEdIETREKAVEFGDRLMakneqlknnepdnekNFGLFVHVDSRHK-FRDG-QYFYQI 1358
                  89**************************************************************************.****.9***97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1633 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      412  (0.0229795); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.88u 0.28s 00:00:01.16 Elapsed: 00:00:00.43
# Mc/sec: 11513.04
//
Query:       KHJ35221.1  [L=1135]
Description: putative ribosome biogenesis protein urb1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.7e-92  308.7   4.1    1.2e-91  307.6   4.1    1.6  1  Npa1         Ribosome 60S biogenesis N-terminal
    3.3e-54  183.5   4.3    3.2e-53  180.3   3.1    2.9  2  NopRA1       Nucleolar pre-ribosomal-associated protein 1
     0.0086   16.1   0.0       0.38   10.9   0.0    3.2  3  Arm          Armadillo/beta-catenin-like repeat
  ------ inclusion threshold ------
       0.05   13.5   0.0       0.26   11.2   0.0    2.4  1  Picorna_P3A  Picornaviridae P3A protein


Domain annotation for each model (and alignments):
>> Npa1  Ribosome 60S biogenesis N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  307.6   4.1   2.7e-95   1.2e-91       3     339 .]     104     453 ..     102     453 .. 0.94

  Alignments for each domain:
  == domain 1  score: 307.6 bits;  conditional E-value: 2.7e-95
        Npa1   3 eifqlWsyaaqtnneellsavlallalllrllsshldfreeglelikriLqk.hlkllyrnlss..skeslisptLrLlteivsfdggalarevlrsfd 98 
                 +++++Ws+a+++n+e+llsav+++lalll++ s++l++ ++g+ l k +L+k + +l++r+ls+  +ke++isp+LrLl+e++  dggala++v+++++
  KHJ35221.1 104 DLIKIWSFASESNKENLLSAVPSVLALLLKITSNSLELLTYGISLGKVLLHKdQFELIKRGLSAnkNKEHVISPILRLLRELSMLDGGALANSVYKARN 202
                 89**************************************************************77779****************************** PP

        Npa1  99 fslkvlpklltprkrekkekkedkkkkpsiRtlfirFllsflssgnpslkkdlLeqkkilsalfkglkeDppetvqevLetlkekvlkdkkikrstklk 197
                  +++ + ++lt+ +++   ++ ++++kps+Rt++irFll+++++ +++ k+d+L+q++i+s l++++ +Dpp +v+++L t++ +++kd +++r +k+k
  KHJ35221.1 203 ATFQAMVRNLTLGYTG--HGN-EELRKPSVRTNAIRFLLQLVKHLSTESKADILSQRDIFSTLIRDIINDPPFLVRDILLTIEIHIIKDASLPRDAKTK 298
                 ***************4..344.45569************************************************************************ PP

        Npa1 198 lfnesaleklaslysrdeeedqdeedekeekesvaelvhefLlalctspgaGicfpdkgwyprea.sdeksae.............gsevtvnk..ksf 280
                 l+++++l ++asly+++++e+++e     +++sv+e +h+fLl +c+s + G++ +++g+ypr+   + ++++             +s+++++k  +++
  KHJ35221.1 299 LLSSRFLVNIASLYRYNKSEEKNEI----STSSVSESAHKFLLLACSSLDSGVLLKQSGLYPRGLvINICDENntnlnnkqfdlglDSIEWIDKytEKV 393
                 *******************754444....5799******************************851344444477899********************* PP

        Npa1 281 kvyNklLlnllktLkpwederqqeLllkilkacPeLvapylkets.lslePrlsstWign 339
                 +v+N++L++++ +Lkpw++ r++eL+++i+ka+PeL+a y++ ++ + ++P+l++ W+g+
  KHJ35221.1 394 PVRNSILSEFIHSLKPWSNIRHAELIISIFKAAPELIAGYFSGKNnFLFDPKLTAMWVGY 453
                 *****************************************55555***********986 PP

>> NopRA1  Nucleolar pre-ribosomal-associated protein 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.079   3.5e+02      12      50 ..     226     267 ..     224     271 .. 0.82
   2 !  180.3   3.1   7.2e-57   3.2e-53       2     201 .]     903    1095 ..     902    1095 .. 0.97

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.079
      NopRA1  12 deeirrlAlavlskllasleesss...fkektqlllllsell 50 
                 ++++r  A+  l +l+++l ++s+    +++++++ l+  + 
  KHJ35221.1 226 KPSVRTNAIRFLLQLVKHLSTESKadiLSQRDIFSTLIRDII 267
                 6899999************87777788888888888887765 PP

  == domain 2  score: 180.3 bits;  conditional E-value: 7.2e-57
      NopRA1    2 gllvlsLssedeeirrlAlavlskllasleesssfkektqlllllselletllaskseeeekeprlpslialflaralriltnPehplYekvnrfll 98  
                  + l++ Lss++ +irr Al +++k+ ++l+es+ f+e++q++lll+elle+++   ++++     l+s+ + f++ a+++l +P+h+lY+kvn+fl 
  KHJ35221.1  903 KSLIMLLSSKHCNIRREALINITKFSHQLKESK-FEEREQIWLLLQELLESSRIIINQKP-----LTSIFSCFASYAVDVLKDPSHSLYPKVNQFLS 993 
                  568******************************.****************8887668888.....******************************** PP

      NopRA1   99 srpeldlndvPlfysllyssseedeeykkersWiLrlladGlrtksDlkllkrrrvfelllslynsplldaklrelilelllratrieggattLitr 195 
                  ++p ++l+++P++++l+ +s++ d +++ er+W++++l dGl +++Dl+++++r vfe++ls yn      kl+++il++l +a+ i+gg +tL+tr
  KHJ35221.1  994 QKPVWRLDQIPMMHRLIDESPSLDVAVYSEREWLINILSDGLCSEADLEIYRKRLVFERILSCYNY-NFGLKLQNQILNILAKACLIKGGISTLVTR 1089
                  *****************************************************************7.56789************************* PP

      NopRA1  196 sGllsW 201 
                  ++l++W
  KHJ35221.1 1090 FSLVTW 1095
                  ****** PP

>> Arm  Armadillo/beta-catenin-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.85   3.8e+03       5      22 ..     171     183 ..     168     187 .. 0.50
   2 ?    1.0   0.0      0.11   4.9e+02       3      28 ..     223     248 ..     221     254 .. 0.78
   3 !   10.9   0.0   8.5e-05      0.38       5      33 ..     893     921 ..     890     921 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.85
                 HHHHHHTTHHHHHHHHTT CS
         Arm   5 kdavieaGavppLvrLLs 22 
                 k++     ++ p +rLL+
  KHJ35221.1 171 KEH-----VISPILRLLR 183
                 444.....4555555554 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.11
                 HHHHHHHHTTHHHHHHHHTTTSSHHH CS
         Arm   3 enkdavieaGavppLvrLLssedeev 28 
                 e ++  ++ +a++ L++L ++ ++e 
  KHJ35221.1 223 ELRKPSVRTNAIRFLLQLVKHLSTES 248
                 6666778889**********988875 PP

  == domain 3  score: 10.9 bits;  conditional E-value: 8.5e-05
                 HHHHHHTTHHHHHHHHTTTSSHHHHHHHH CS
         Arm   5 kdavieaGavppLvrLLssedeevqeeAa 33 
                 ++ vie G ++ L+ LLss+++++++eA+
  KHJ35221.1 893 IEDVIEDGYLKSLIMLLSSKHCNIRREAL 921
                 7789***********************96 PP

>> Picorna_P3A  Picornaviridae P3A protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   5.9e-05      0.26      13      47 ..     948     984 ..     927     994 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 5.9e-05
  Picorna_P3A  13 alieqmeafi..epkasvfkcaasrvvdklkeasrev 47 
                   l+e    +i  +p +s+f c+as  vd lk+ s+++
   KHJ35221.1 948 ELLESSRIIInqKPLTSIFSCFASYAVDVLKDPSHSL 984
                  5556666665225889****************99886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1135 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.71u 0.29s 00:00:01.00 Elapsed: 00:00:00.43
# Mc/sec: 7869.42
//
Query:       KHJ35222.1  [L=310]
Description: hypothetical protein EV44_g3408 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (310 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       412  (0.0229795); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2359.97
//
Query:       KHJ35223.1  [L=264]
Description: hypothetical protein EV44_g3643 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
       0.05   14.3   0.9      0.088   13.5   0.9    1.3  1  Occludin_ELL  Occludin homology domain
       0.84    9.8   5.5       0.95    9.6   4.6    1.6  1  MRP-L20       Mitochondrial ribosomal protein subunit L20


Domain annotation for each model (and alignments):
>> Occludin_ELL  Occludin homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.9   9.8e-06     0.088      20      98 ..      50     130 ..      47     133 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 9.8e-06
  Occludin_ELL  20 eYkeYkelhaeleevskkfseLerelkelkegsk..eykkieeeilqeykklkk.dpeyqekkkrceyLkekLshiKklike 98 
                   +Y+eY+  + +l  + + f++L r+   + +++k      i+e + ++y++++k + e   k k + y + kL+ iK++i++
    KHJ35223.1  50 KYDEYMFTEIRLP-TLQGFRKLLRQHGIYVRKTKvsCSIAIAEALNSQYREWTKsEVEEIIKDKTFSYVSGKLQYIKEQIQT 130
                   6888887766665.457889998888888887777556678889999****99977788889999***************85 PP

>> MRP-L20  Mitochondrial ribosomal protein subunit L20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   4.6   0.00011      0.95       9      51 ..     161     203 ..     153     226 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00011
     MRP-L20   9 synrtksrlnlkpeesfgliynPpssapsvshtPtkFLPksdp 51 
                 s n +++  n+ p+es+ l +nP +s p+  + P   LP++ +
  KHJ35223.1 161 SINPNQTIPNVAPHESKHLNFNPNPSNPQIHIQPSNNLPSNTQ 203
                 5567778889*****************************9854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       778  (0.0433934); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1891.03
//
Query:       KHJ35224.1  [L=930]
Description: putative rsc complex subunit rsc9 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-20   73.2   0.2    6.1e-20   71.7   0.2    1.9  1  ARID      ARID/BRIGHT DNA binding domain


Domain annotation for each model (and alignments):
>> ARID  ARID/BRIGHT DNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.7   0.2   3.4e-24   6.1e-20       3      90 .]      19     105 ..      17     105 .. 0.91

  Alignments for each domain:
  == domain 1  score: 71.7 bits;  conditional E-value: 3.4e-24
                 HHHHHHHHHHHHHTTS.SSS----SSSS-STTHHHHHHTTTSSHHHHTT..CHHHHHHHHHTS-..-.......HHHHHHHHHHHHHHHH CS
        ARID   3 eeFlstLkqfhenrgt.lkkiPviggkevdlykLyraVikrGGfrkvtq.knkWeevaqklglpredpeasesvaqalksiYeryLlpyE 90 
                  eF+s+L+++h++rgt ++  P++g k+++l++Ly+aV++rGG++ v++ k +W+++ q+++l  ++      +a +lk +Y++yL++yE
  KHJ35224.1  19 VEFISKLASYHQKRGTyFDPEPKVGTKHMNLFQLYKAVTSRGGYDVVSDeKLAWRKLGQEFNLGSSN---LPAIAFQLKGVYYKYLAAYE 105
                 69**************76778***************************84599********997544...459****************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (930 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       419  (0.02337); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.65u 0.29s 00:00:00.94 Elapsed: 00:00:00.46
# Mc/sec: 6031.18
//
Query:       KHJ35225.1  [L=564]
Description: putative telomeric repeat binding factor 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-56  192.1   3.5    1.9e-56  191.4   3.5    1.3  1  TRF              Telomere repeat binding factor (TRF)
  ------ inclusion threshold ------
      0.026   14.7   0.0      0.062   13.5   0.0    1.7  1  Myb_DNA-binding  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> TRF  Telomere repeat binding factor (TRF)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.4   3.5   2.1e-60   1.9e-56       3     220 ..     114     332 ..     112     339 .. 0.98

  Alignments for each domain:
  == domain 1  score: 191.4 bits;  conditional E-value: 2.1e-60
                 H..HHHHHHHHHHHHHHHHTHHHHHHHHHHH.TSHHHHHHHHHHHHCHCHCCCCHHHHHHHHHHHHHHSHHHHHHHHHHHHTTTHTTEECSSSTS-HHH CS
         TRF   3 ksLplLdnlstqllrllaespyqkilaivsepdsefgeafdtllslfertkklysekkpllspsilkkressiestlrkinlatfllsvlgtleigfle 101
                  sLp+L+nl+tq+++ll+ + +++i++iv  +dse g+a++tl+slf+++k++ys+   +ls++ l+++e+  ++++r +nl+tf+ +v++ +e+gfl+
  KHJ35225.1 114 LSLPMLENLTTQIISLLTRKNVHDIITIVNTRDSELGKAYHTLKSLFDQVKNIYSQCGLFLSADALNITEPKHREIIRIANLTTFVCCVFDGNEVGFLD 212
                 69************************************************************************************************* PP

                 HHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHHHHHH.TT-HHHHHHHHHHHSSSSTCCHH......HHH..HHHHHTTHHHHHHHHHHHHHHHTC. CS
         TRF 102 laenfldifcpenelgkllkpqgvLyleLktqayisalk.eaeerskeeiLddlfpddlediLlerrngklltpsetdfverckkrkekLlniinekd. 198
                 l+ +f++if+ e+    l+k++g+L+l+Lktq+y+sa++ e++er +e++L+++fp++le+iL+ r++++ l++se +f   +  r+e L+ +  + d 
  KHJ35225.1 213 LNNHFIEIFAAED--IPLSKEAGDLFLNLKTQIYLSAISqEEQERTREDLLEEYFPNNLEEILKRRHPNQPLSQSEYEFTRLLINRREFLASTPIDLDs 309
                 *************..***********************9999***************************************************999999 PP

                 .CHHHHCS-HHHHHHHHHHHHHC CS
         TRF 199 .keLlqkyswesflkellsYvsk 220
                  + L+++yswe fl+++  ++ k
  KHJ35225.1 310 iQILSENYSWEGFLNQVAVFLGK 332
                 *****************999887 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   6.9e-06     0.062       1      45 [.     454     509 ..     454     510 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 6.9e-06
                      CSSSBHHHHHHHHHHHHHHTTC.HHHHHHHHT..S........S-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgkWteeEdelLleavkkhGnr.WkkIaerlg..g........Rtekqcrsrwrny 45 
                      r +W+ eE+  L  ++ +  +  W+ I+  +g  g        R   q +++ rn+
       KHJ35225.1 454 RRPWSSEEERALMAGLDQVRGPyWSQILALYGakGtinevlkdRNQVQLKDKARNL 509
                      689***************99556******999753688899888888888888887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (564 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 4069.64
//
Query:       KHJ35226.1  [L=213]
Description: putative phosphoribosylaminoimidazole carboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-61  205.7   2.4      3e-61  205.4   2.4    1.1  1  AIRC      AIR carboxylase
       0.01   15.5   0.2      0.018   14.6   0.2    1.4  1  PrpR_N    Propionate catabolism activator


Domain annotation for each model (and alignments):
>> AIRC  AIR carboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.4   2.4   3.3e-65     3e-61       2     147 ..      49     194 ..      48     195 .. 0.99

  Alignments for each domain:
  == domain 1  score: 205.4 bits;  conditional E-value: 3.3e-65
                 EEEEESSGGGHHHHHHHHHHHHHTT-EEEEEE--TTTSHHHHHHHHHHCHTTTEEEEEEEEESS--HHHHHHHHSSS-EEEEEE--STTCCHHHHHHHH CS
        AIRC   2 VgiimGSdsDlevmkkaaeilkelgveyevrvvSahrtpeelleyaeeaeerglkviIagAGgaahLpgvvaslttlPVigvPvkskalkgldsllSiv 100
                 +++ mGSdsDl+++k   e+lk+++++++++++Sahrtp++++e+a++ae++g+kviIa+AGgaahLpg++as t lPVig+P+k+++l+g+dsllSiv
  KHJ35226.1  49 IAVTMGSDSDLPILKPGLELLKTMQIPFSITITSAHRTPQRMIEFASSAESKGIKVIIAAAGGAAHLPGMIASCTCLPVIGIPIKASTLDGTDSLLSIV 147
                 89************************************************************************************************* PP

                 T--TTS--EE-SSTHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHH CS
        AIRC 101 qmPsgvpvatvaigkaknAallAaqilalkdeelaekleeyreelke 147
                 qmP+gvpvatvai+++ nAallA++il+++de++++k+ +y ++++e
  KHJ35226.1 148 QMPRGVPVATVAINNSVNAALLAVRILGTSDETIKNKVIQYSKQMSE 194
                 ******************************************99986 PP

>> PrpR_N  Propionate catabolism activator
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.2   2.1e-06     0.018       6      94 ..      79     175 ..      76     210 .. 0.63

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 2.1e-06
      PrpR_N   6 dievvegdleeavelakeleaegvdviiSrGgtae....llrkhvsvPVveikvs.....gyDilralkqakklgekialvgfeniikglktlselld 94 
                  i+  + + ++ +e a ++e++g++vii++ g a+    ++ + + +PV+ i+++     g D l ++ q+ +    +a v+ +n ++++    ++l+
  KHJ35226.1  79 TITSAHRTPQRMIEFASSAESKGIKVIIAAAGGAAhlpgMIASCTCLPVIGIPIKastldGTDSLLSIVQMPRGVP-VATVAINNSVNAALLAVRILG 175
                 56666667788999**************987777645557899999*****9985222224565666655555555.777777776666555544444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       555  (0.0309554); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1606.11
//
Query:       KHJ35227.1  [L=358]
Description: putative d-arabinitol dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.9e-58  196.0   0.3    9.8e-58  195.5   0.3    1.2  1  adh_short_C2   Enoyl-(Acyl carrier protein) reductase
    1.6e-39  135.4   0.5    2.5e-39  134.8   0.5    1.3  1  adh_short      short chain dehydrogenase
    2.3e-11   43.9   0.3    3.4e-11   43.4   0.3    1.2  1  KR             KR domain
     0.0055   16.2   0.1       0.01   15.3   0.1    1.4  1  Epimerase      NAD dependent epimerase/dehydratase family
  ------ inclusion threshold ------
      0.046   13.1   0.1       0.59    9.5   0.1    2.0  1  GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase


Domain annotation for each model (and alignments):
>> adh_short_C2  Enoyl-(Acyl carrier protein) reductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.5   0.3   2.7e-61   9.8e-58       1     234 []     107     356 ..     107     356 .. 0.92

  Alignments for each domain:
  == domain 1  score: 195.5 bits;  conditional E-value: 2.7e-61
                   TTTTSHHHHHHHHHHHTT-EEEEEESSGGH.HHHHHHHHHHTT.....SE.E.....EE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS CS
  adh_short_C2   1 GaasgIGraiAkalaeeGaevvltdlneea.kkrveelaeelg.....ae.v.....lecDVtdeeqvealveevvekfgklDilvnnagiapklkg 85 
                   G a+g+G  +A+a+   Ga++++ dln+e+ +k++ e+ +++      a+ +      ++DV+++e+v+a+v ev ek+gk+D lv +ag++++   
    KHJ35227.1 107 GGARGLGLVMAQAMVISGADLAIIDLNKEEaEKQCGEIIASFVrenpnAQrIpkvtaHHADVSSQESVDAAVTEVIEKHGKIDNLVTSAGFTEN--Y 201
                   669***************************9999999888765333332232555789************************************..9 PP

                   -GGGH-HHHHHHHHHHHTHHHHHHHHHHHH.HCTSC..CEEEEEEEGGGTSB.STTTT.HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE--BHCT CS
  adh_short_C2  86 pfletsreefdraldvnlyslfllakaalp.lmkeg..gsivnlssvgaerv.vpnyn.aygaaKaalealtrylAvelgpkgiRvNavspgpikTl 177
                   ++++ + + +++  +vn+ +++l+a a ++ lmk++  gs++ + s+++ +v vp+ +  y+a+Kaa+ +l+ +lAve+++ giRvN++spg++ T 
    KHJ35227.1 202 EAIKYPIDRVRKLWQVNVDGTYLFAIATAKhLMKRKapGSLIFIGSMSGAIVnVPQPQaPYNASKAAIRHLAASLAVEWAHAGIRVNCISPGYMLTA 298
                   9***********************9999998999999*******9996666659999989************************************* PP

                   GGGGSTT.HHHHHHHHHHHSTTSS-B-HHHHHHHHHHHCSGGGTT--SEEEEESTTGG CS
  adh_short_C2 178 aasgikg.fdelleelearaplgrlgtpeevaeaalfLasdeasyitGqtlvvDgGlt 234
                   ++++i + +++l++++ + +p+g++g+pe+   a++fLasd++syitG+++ +DgG+t
    KHJ35227.1 299 LTKKILDeKPDLKKKWTSLIPVGKMGDPEDLMGAVVFLASDASSYITGSDIRIDGGYT 356
                   *9999885788**********************************************8 PP

>> adh_short  short chain dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.8   0.5   6.9e-43   2.5e-39       2     193 ..     102     306 ..     101     308 .. 0.88

  Alignments for each domain:
  == domain 1  score: 134.8 bits;  conditional E-value: 6.9e-43
                 EEEEESTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHT..........TSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE---SS-- CS
   adh_short   2 vvlvtGassGIGraiakelakeGakvvvvdrseekleevakelkee..........gakalaiqvDvtdreevealvekavkklgkldvLvnNAGitgs 90 
                 v +vtG+++G+G+ +a++++ +Ga+++++d ++e++e+ + e+ +             k++a ++Dv+++e+v+a+v ++++k+gk+d Lv+ AG t++
  KHJ35227.1 102 VGMVTGGARGLGLVMAQAMVISGADLAIIDLNKEEAEKQCGEIIASfvrenpnaqrIPKVTAHHADVSSQESVDAAVTEVIEKHGKIDNLVTSAGFTEN 200
                 568*********************************997777654443323532233459999************************************ PP

                 SSGGGCSHHHHHHHHHHHTHHHHHHHHHHHHHHH.HCTTEEEEEEEEGGG..TSB-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSHH CS
   adh_short  91 gpfselseeewervievNltgvflltravlpaml.kqssGrIvnvsSvag..kvpvagvaaYsAsKaavagltrslakelaptgirvnavaPGlvdTdm 186
                  ++ ++  ++++++ +vN+ g++l + a +++++ ++  G+ ++++S+ g   +    +a+Y AsKaa+++l+ sla e+a  girvn++ PG++ T++
  KHJ35227.1 201 YEAIKYPIDRVRKLWQVNVDGTYLFAIATAKHLMkRKAPGSLIFIGSMSGaiVNVPQPQAPYNASKAAIRHLAASLAVEWAHAGIRVNCISPGYMLTAL 299
                 ************************999999996648889***********74333445899************************************** PP

                 HHHHCTH CS
   adh_short 187 akelrek 193
                 +k++ ++
  KHJ35227.1 300 TKKILDE 306
                 *998765 PP

>> KR  KR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   0.3   9.5e-15   3.4e-11       4     163 ..     104     276 ..     102     291 .. 0.82

  Alignments for each domain:
  == domain 1  score: 43.4 bits;  conditional E-value: 9.5e-15
                 EEETTTSHHHHHHHHHHHHHHS-.EEEEE-SS..--HHHHHHHHHHHHTT-......EEEE----TT-HHHHHHHHHHHHHHSS---EEEE-------- CS
          KR   4 litGGlGgLGlelarwlaekgar.hlvllsRsaaadedskaliaelealga......evevvaaDvsdkdavealleeikaeeppikGvihaAgvlrdk 95 
                 ++tGG+ gLGl++a+ ++ +ga   ++ l ++ +a+++  + ia++ + +       +v++ +aDvs++++v a+++e+ +++++i   + +Ag++++ 
  KHJ35227.1 104 MVTGGARGLGLVMAQAMVISGADlAIIDLNKE-EAEKQCGEIIASFVRENPnaqripKVTAHHADVSSQESVDAAVTEVIEKHGKIDNLVTSAGFTENY 201
                 79*******************76145555555.5555555555555443222355679***************************************** PP

                 -TTT--HHHHHHHHTTTTHHHHHHHHHTTT.....S--SEEEEEEEHHHHH--..TT-HHHHHHHHHHHHHHHHH CS
          KR  96 lleemtaedleqvlapKvkGawnLhelled.....esldffvlfSSiagllgs..agqanYaaaNaflDalaeyr 163
                    +   ++++++ +  v+G+     ++++     +    ++++ S++g + +  + qa Y a  a +  la++ 
  KHJ35227.1 202 EAIKYPIDRVRKLWQVNVDGTYLFAIATAKhlmkrKAPGSLIFIGSMSGAIVNvpQPQAPYNASKAAIRHLAASL 276
                 *********************9998877776666588899********988772246899*99999988888765 PP

>> Epimerase  NAD dependent epimerase/dehydratase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   2.9e-06      0.01       3     228 ..     105     339 ..     104     351 .. 0.71

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.9e-06
                 EETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC................EEEE--TT-HH....HHHHHHHHH.T-SEEEE--S---HHHH CS
   Epimerase   3 VtGatGfiGsalvkallekgyevigldrlssasntarledl................elveldltdrs....alerlfkee.qpdavihlAavggvaas 80 
                 VtG++  +G  +++a+   g ++  +d ++++ ++++ e +                + +++d+  ++    a++++++++ ++d  +  A+     + 
  KHJ35227.1 105 VTGGARGLGLVMAQAMVISGADLAIIDLNKEEAEKQCGEIIasfvrenpnaqripkvTAHHADVSSQEsvdaAVTEVIEKHgKIDNLVTSAGFTENYEA 203
                 666666666666666666666666666554444444444446666666666666666********999788889999999***********95555555 PP

                 HHSHHH....HHHHHTHHHHHHHHHHHHHTCT.....EEEEEEEGGGGTSCSSSSBSTCSTTS----SSHHHHHHHHHHHHHHHHHHHHT-EEEEEEES CS
   Epimerase  81 sedpad....fieknlqgtlnlleaarkagvk.....rllflsSsevYGkdaeqpkeettltgplkpnspYaaaKlageklveayaaqyglnaiilrlf 170
                 +++p d    +++ n+ gt+  + a  k+ +k      l+f++S  + G+  +      +     +p+ pY a+K+a+ +l+ ++a +    a +++  
  KHJ35227.1 204 IKYPIDrvrkLWQVNVDGTYLFAIATAKHLMKrkapgSLIFIGS--MSGAIVN------V----PQPQAPYNASKAAIRHLAASLAVEW---AHAGIRV 287
                 77776522227889999999888888877664344457777777..4442222......2....38******************99999...6888888 PP

                 EEESTTS-TTSTTSHHHHHHHHHHTTS.SSEEEETTST-EEEEEEHHHHHHHHHHHHHH CS
   Epimerase 171 nlyGprngegevsrvipalirkilegk.qevtllgdgtalRdflyveDvaeaillvleh 228
                 n ++p+        +++al +kil++k +  + + ++ ++   ++ eD+  a+++++  
  KHJ35227.1 288 NCISPG-------YMLTALTKKILDEKpDLKKKWTSLIPVGKMGDPEDLMGAVVFLASD 339
                 999998.......8888888888888866677788888888888888888888777665 PP

>> GDP_Man_Dehyd  GDP-mannose 4,6 dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.1   0.00017      0.59       2     201 ..     105     307 ..     104     330 .. 0.62

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00017
                    EETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHH....HCTTT...TTGCCEEEEE--TT-HHHHHHHHHHH.....T-SEEEE--S-... CS
  GDP_Man_Dehyd   2 iTGiaGfiGsylaelLlekgyevhgivrrsssfntgrie....hlakdpkeeleenlklhkgDltDssslerllaev.....qpdevynLAAq... 85 
                    +TG+a   G  +a+ ++  g +  +i+ ++++ + +  e     ++++p+++  ++++ h++D++ ++s++ ++ ev     ++d+ +  A+    
     KHJ35227.1 105 VTGGARGLGLVMAQAMVISGADLAIIDLNKEEAEKQCGEiiasFVRENPNAQRIPKVTAHHADVSSQESVDAAVTEViekhgKIDNLVTSAGFten 200
                    778877788888888888888887776666555444333111123456666666688888888888877776666665533455555555554222 PP

                    .--HHHHTTSHHHHHHHHTHHHHHHHHHHHHCT..TT..SEEEEEEEGGGG-S-SSSSB-TTS-----SHHHHHHHHHHHHHHHHHHHH---EEEE CS
  GDP_Man_Dehyd  86 .shVdvsfekPeytaevnvlGtlrLLeairalglekk..vrfyqaStsEvYGkvqevpqtEttpfyPrsPYaaaKlyadwivvnyreayglfavng 178
                      ++++ ++   + ++vnv Gt+    a  ++ +++k    ++++++  + G   +vp       +P+ PY a+K++  +++ +       +a  g
     KHJ35227.1 201 yEAIKYPIDRVRKLWQVNVDGTYLFAIATAKHLMKRKapGSLIFIGS--MSGAIVNVP-------QPQAPYNASKAAIRHLAASLAV---EWAHAG 284
                    23466666666777788888887655444444333321134444443..446666555.......59999*****999999987765...467778 PP

                    EE-EEESTTS-TTSCCCHHHHHH CS
  GDP_Man_Dehyd 179 ilfnhesprrgetfvtrkitrav 201
                    i  n  sp    t  t+ki +  
     KHJ35227.1 285 IRVNCISPGYMLTALTKKILDEK 307
                    88888888888888888887655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (358 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2530.80
//
Query:       KHJ35228.1  [L=156]
Description: hypothetical protein EV44_g3222 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.9e-05   24.3   0.5    4.2e-05   23.2   0.5    1.6  1  zf-CCHC_5  GAG-polyprotein viral zinc-finger
  ------ inclusion threshold ------
       0.12   12.5   3.0       0.21   11.7   3.0    1.4  1  zf-CCHC    Zinc knuckle
       0.18   11.6   1.0       0.32   10.7   1.0    1.4  1  zf-CCHC_4  Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.2   0.5   7.1e-09   4.2e-05       2      21 ..     112     131 ..     111     134 .. 0.92

  Alignments for each domain:
  == domain 1  score: 23.2 bits;  conditional E-value: 7.1e-09
                 --B-TTT-SSBS-TTT---S CS
   zf-CCHC_5   2 pglCpRCkkgkHwardChsk 21 
                  glC  C++gkH a++C+ k
  KHJ35228.1 112 NGLCYYCGRGKHKASECKIK 131
                 59***************966 PP

>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   3.0   3.5e-05      0.21       2      17 ..     114     129 ..     113     130 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 3.5e-05
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                  Cy+CG+  H a++C+
  KHJ35228.1 114 LCYYCGRGKHKASECK 129
                 5**************7 PP

>> zf-CCHC_4  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.0   5.4e-05      0.32      29      48 ..     110     129 ..     109     130 .. 0.93

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 5.4e-05
   zf-CCHC_4  29 rLrsfCyiCgvlGHsdkrCd 48 
                 r+  +Cy Cg+  H++++C+
  KHJ35228.1 110 RINGLCYYCGRGKHKASECK 129
                 78899**************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (156 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       689  (0.0384294); expected 358.6 (0.02)
Passed bias filter:                      511  (0.0285013); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1212.44
//
Query:       KHJ35229.1  [L=174]
Description: putative opy2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (174 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       279  (0.0155614); expected 358.6 (0.02)
Passed bias filter:                      215  (0.0119917); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.21s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 1434.24
//
Query:       KHJ35230.1  [L=430]
Description: putative ras modification protein erf4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-34  118.5   0.0    7.1e-34  116.4   0.0    2.0  2  Erf4      Golgin subfamily A member 7/ERF4 family


Domain annotation for each model (and alignments):
>> Erf4  Golgin subfamily A member 7/ERF4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0     0.084   1.5e+03      16      23 ..      71     128 ..      61     172 .. 0.51
   2 !  116.4   0.0   3.9e-38   7.1e-34       1     116 []     292     417 ..     292     417 .. 0.94

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.084
        Erf4  16 qFstllp..................................................p 23 
                 +F+++ p                                                  +
  KHJ35230.1  71 TFQNTAPkkyeaaridwnqgesnrrqrlslwnpqnftprnvasrerilddsndtsdhS 128
                 5555555444444444444444444444444444444444444444444444444444 PP

  == domain 2  score: 116.4 bits;  conditional E-value: 3.9e-38
        Erf4   1 ivripRdyst.gdlapqFstllppeLsgy.iseeefeeiinkiNeilaeafspysvrnildnvlglltlylwslvlkthykkklkklekyieelNeel. 96 
                 i+ri+Rd++  gdlap+Fs+l+p+ L+ + ++e+ef+++++++N++l+ af+p ++rni+d+++++lt++lw++ + + +k+kl+++ek++e++N+++ 
  KHJ35230.1 292 IIRIQRDWMLqGDLAPTFSNLYPEVLDTAgVTEQEFRNLLENLNKELIPAFNPLGFRNIFDGIMSVLTGWLWEDAGLADIKEKLRRVEKLLEDWNKKMe 390
                 8*************************************************************************************************7 PP

        Erf4  97 ....fkergl....kiisprrsgylsld 116
                      +++      k +++rr+gy++ld
  KHJ35230.1 391 kklmSRPE-TgaipKALPLRRTGYMTLD 417
                 76642333.25689************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (430 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.44
# Mc/sec: 2967.52
//
Query:       KHJ35231.1  [L=292]
Description: hypothetical protein EV44_g3941 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-10   41.3   0.1    2.6e-10   40.2   0.1    1.5  1  DDE_1     DDE superfamily endonuclease


Domain annotation for each model (and alignments):
>> DDE_1  DDE superfamily endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.2   0.1   1.4e-14   2.6e-10      30      95 ..      39     104 ..      18     117 .. 0.82

  Alignments for each domain:
  == domain 1  score: 40.2 bits;  conditional E-value: 1.4e-14
       DDE_1  30 rafkngektkkkldveyksnrkawltssifeeWLkvfdkrle..aekrkilLlldssrshetvel.les 95 
                 ++ ++    + ++d+e+ +++++w+t++++ eW+k+f++++e  +++ + lL+ld++ sh+t e+ + +
  KHJ35231.1  39 QSDWY---RELPVDWEIAVSDNGWTTNQLGFEWIKHFNTQTEssKKGAYRLLILDGHSSHATPESdQYC 104
                 44444...678899****************************989999**************9994444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (292 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       699  (0.0389871); expected 358.6 (0.02)
Passed bias filter:                      357  (0.0199119); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2306.34
//
Query:       KHJ35232.1  [L=1133]
Description: putative snf2 family domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.6e-72  242.7   0.1    6.8e-72  242.1   0.1    1.3  1  SNF2_N        SNF2 family N-terminal domain
    1.1e-21   76.6   0.0    2.4e-21   75.5   0.0    1.6  1  HIRAN         HIRAN domain
    1.5e-13   51.0   0.0    5.2e-13   49.3   0.0    2.0  2  Helicase_C    Helicase conserved C-terminal domain
    1.1e-05   25.6   0.0    3.4e-05   23.9   0.0    1.9  1  ResIII        Type III restriction enzyme, res subunit
    4.2e-05   23.3  11.3    8.3e-05   22.4  11.3    1.5  1  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
    0.00041   20.1   7.8    0.00074   19.3   7.8    1.4  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
     0.0017   18.2   8.6     0.0017   18.2   8.6    1.9  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
     0.0023   18.2  10.3     0.0054   17.0  10.3    1.7  1  zf-RING_2     Ring finger domain
  ------ inclusion threshold ------
      0.016   15.1   9.1      0.035   14.1   9.1    1.6  1  zf-RING_5     zinc-RING finger domain
      0.028   14.4   9.2      0.057   13.5   9.2    1.6  1  zf-RING_UBOX  RING-type zinc-finger
      0.087   12.4   0.9       0.75    9.4   0.1    2.4  2  DEAD_2        DEAD_2
          9    6.6   8.6         19    5.5   8.6    1.6  1  zf-C3HC4_4    zinc finger of C3HC4-type, RING


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  242.1   0.1   4.5e-75   6.8e-72       1     349 [.     432     817 ..     432     818 .. 0.85

  Alignments for each domain:
  == domain 1  score: 242.1 bits;  conditional E-value: 4.5e-75
                 HHHHHHHHH.........................................................HHHHHTT--EEE---TTS--HHHHHHHHH.... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx..................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx. RF
      SNF2_N   1 yQkeavkwmlkReqnlqdleaalrkllk..................tldgekiyvnpatgevveesaeakqsvrGGiLaDemGLGKTvqvlalilaqr. 80 
                 yQk+a+ wm+ Re+  q++++ l                         +  k +vnp++ge++ + + ++q+  GGiLaDemGLGKT+++++li++++ 
  KHJ35232.1 432 YQKQALYWMVSREKDSQNIHKELSMHPLweeytwptndaddkkllqIPNEDKFFVNPYSGELSLKFPVQEQKCFGGILADEMGLGKTIEMMSLIHTHKs 530
                 9***************98887765433255*************9987778899******************************************9996 PP

                 ...........HHTTTS---..............S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH-----------------EEEE-HHHHH CS
                 ...........xxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  81 ...........akeekdkek.......krkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapklladydvvittYdvls 161
                                              ++ ++  tLiv+P+sll qW++e  r  ++++l+ +vy g+ k +   +k+ +++ +  +++it+Y v+ 
  KHJ35232.1 531 idlnipnliptP-------DdsimkisSSQNLASSTTLIVAPMSLLAQWQSEAGRASKEGTLNSFVYYGNDKISDL-RKICRRISEVPNIIITSYGVVL 621
                 666666665552.......04444444677888999*********************************9865555.7888888999999999998888 PP

                 HHT.............TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHTHHHHHHHH CS
                 xxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 162 reaelq.......kkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkllqrpieaqa 253
                 +e + +        ++  l +++ +rv+lDE+h +kn +sk+a+a+ ++++++rw+ltGTPi n ledl++L+ fLr+ep++++ ++++ ++ p+e+++
  KHJ35232.1 622 SEYNQVtarnherSSYCGLFSMKYFRVILDEAHYIKNRQSKTAKACYQIEAEHRWVLTGTPIVNRLEDLFSLIRFLRVEPWSNFSFWRTFITVPFESKD 720
                 666655788888799999******************************************************************************555 PP

                 HHH.HHHHHTT-STTEE---GGGT....--..S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH-HHHHHHHHHHHHH CS
                 xxx.xxxxxxxxxxxxxxxxxxxx....xx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 254 ekg.rsrLlqllqrlmlrrakkdv....ek..nlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskskekilelllelrqacn 345
                   +      ++l++l lrr+k+      e+   lP kt ei+ +klsk+e+++Y  +l+ + + + a +    + +        + i+  +++lrq c+
  KHJ35232.1 721 FLRaLDVVQTILEPLALRRTKDMKtpsgEAlvTLPLKTIEILKIKLSKEEQEVYDYILNRAKQSFEANVEAGTVLKAY------TSIFAHVMRLRQSCC 813
                 4330344567899*******9976686633448**********************77777666666666655433333......558************ PP

                 ---X CS
                 xxxx RF
      SNF2_N 346 hpql 349
                 hp+l
  KHJ35232.1 814 HPSL 817
                 **98 PP

>> HIRAN  HIRAN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.5   0.0   1.6e-24   2.4e-21       1      95 [.     169     287 ..     169     288 .. 0.99

  Alignments for each domain:
  == domain 1  score: 75.5 bits;  conditional E-value: 1.6e-24
                 EEEEEEEEECGGGCCT..---TTEEEEEEE-T...........................T-SS-TT-EEEEETTS-EEEEE-HHHHHHHHHHHHTTSSE CS
       HIRAN   1 lgsfevsvvglsyysgtgylkpgtevilerep...........................nnpadanavrvlnergfeiGrlprevakwlspLldsgfit 72 
                 +g+f ++++ ++  sgt+ +k+g+ v++er++                             ++ +  vr++n +g+eiGr+p+  a w+s+L+d+++++
  KHJ35232.1 169 IGAFGCDGWVTR--SGTTLIKHGDVVRIERQKiqlpkssvfsgkqgqstaqaipkfnlpISRRVDVLVRFTNSKGEEIGRIPQNSADWISTLIDQKICK 265
                 799*********..********************************************9999************************************* PP

                 EEEEESS-TTTEEEEEEEEEEEG CS
       HIRAN  73 fegvvvdapeknlkvgltvylsl 95 
                 f g++v+ape +l+ g+tv+l+l
  KHJ35232.1 266 FVGFCVYAPE-RLRSGDTVFLQL 287
                 **********.**********98 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1       7.4   1.1e+04      32      61 ..     331     359 ..     306     366 .. 0.63
   2 !   49.3   0.0   3.5e-16   5.2e-13       5     111 .]     971    1078 ..     963    1078 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 7.4
                 HHHHHHHTTSTEEEESTT..STHHHHHHHHHH CS
  Helicase_C  32 vklllekkgikvavlhge..lpqnereeileq 61 
                 vkl++e   i+ ++  ++  l++++r++il++
  KHJ35232.1 331 VKLFKE---INLIPSKSSetLEKQKRDKILQA 359
                 455533...44444444222888888888876 PP

  == domain 2  score: 49.3 bits;  conditional E-value: 3.5e-16
                  HHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH..TTSSSEEEESGGGTSSSTSTTESEEEESSSSSSHHH CS
  Helicase_C    5 allellkleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn..kgesdvLiatdvaerGidipkvnlVinfdlprnvts 99  
                  +l+ l  + + g k+++f+++++ l+ ++  l++  i + +l+g++ q+ r  +l++f   ++ + +Li+ ++++ G++++ ++ V ++d++++ + 
  KHJ35232.1  971 HLKSL-RRDAPGTKTVVFSQFTSFLSLIEPALSQAYIPFMRLDGSMAQKLRANVLAEFAssSKGVVLLISLRAGGVGLNLTMAKRVYMMDPWWSFAV 1066
                  33333.68899************8844444467889**********************9433334478***************************** PP

                  HHHHHTTSSSTT CS
  Helicase_C  100 yiqriGRtgRag 111 
                    q+i+R++R+g
  KHJ35232.1 1067 EAQAIDRVHRMG 1078
                  **********86 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   2.3e-08   3.4e-05       2     169 ..     427     682 ..     426     684 .. 0.79

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 2.3e-08
                 -EE-HHHHHHHHHHT.............................................................TTS..EEEEEESTTSTHHHHHHH CS
      ResIII   2 lelreyQeeaienlleklks.......................................................krdk..rglikmaTGtGKTlvaak 43 
                 ++lr+yQ++a+  +++  k+                                                       +  k   g+++ + G GKT+ +++
  KHJ35232.1 427 MKLRHYQKQALYWMVSREKDsqnihkelsmhplweeytwptndaddkkllqipnedkffvnpysgelslkfpvqeQ--KcfGGILADEMGLGKTIEMMS 523
                 7899*******9999555556777889999*****************************************99544..45599**************** PP

                 HHHHH-S............................-EEEEESSHHHHHHHHHHGGGGTGG.........GEEEESSS-B--.................. CS
      ResIII  44 lierllkkgkee.......................kflflvprkslleqtleefkkflseayke.....igkkvsgdkkka............kekdst 102
                 li   ++  + +                        + ++v   sll q+++e  + ++e + +            + k++             ++ +t
  KHJ35232.1 524 LIHTHKSI-DLNipnliptpddsimkisssqnlasSTTLIVAPMSLLAQWQSEAGRASKEGTLNsfvyyG------NDKISdlrkicrrisevPNIIIT 615
                 *9876664.444699********************666777778999****9987777777654444442......33333344444666777788899 PP

                 .-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS..TTTHHHHHT---SEEEEEESS- CS
      ResIII 103 nkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak.kswreilekfkeavllglTATp 169
                 +  ++++++++++a+++e++++   ++ ++f  +i DEaH ++   ++  ++  ++++  +  lT+Tp
  KHJ35232.1 616 SYGVVLSEYNQVTARNHERSSYCGLFSMKYFR-VILDEAHYIKNRqSKTAKACYQIEAEHRWVLTGTP 682
                 999*******9999996666555555555555.678******99743555566666778888889999 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.4  11.3   5.5e-08   8.3e-05       1      41 []     882     926 ..     882     926 .. 0.88

  Alignments for each domain:
  == domain 1  score: 22.4 bits;  conditional E-value: 5.5e-08
                 -TTT-S--SS-E.E-TTS--B-CHHHHHHHHC....TSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepnelleCkHsfCskCirkilks....rkkvkCPlC 41 
                 CpiC ee++++  +++C Hs C+kC++ +++      +k  C +C
  KHJ35232.1 882 CPICSEEPMIERIVTTCWHSTCKKCLLDYINHqkekGEKPRCVTC 926
                 *******************************88765444559888 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   7.8     5e-07   0.00074       2      46 ..     879     929 ..     878     933 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 5e-07
                 GSB-TTTSSS.BS-EEETTEEEEEE-HHHHHHHHH......TT-B-TTT--B CS
  zf-C3HC4_3   2 deeCviCler.prnvvllpCgHlvlCeeCaekllk......rkkkCpiCrrp 46 
                 ++eC+iC e+   + ++  C H  +C++C+ ++ +      +k++C  Cr+ 
  KHJ35232.1 879 QNECPICSEEpMIERIVTTCWHS-TCKKCLLDYINhqkekgEKPRCVTCREF 929
                 689******9445688889****.******9999889999**********85 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.1       8.8   1.3e+04      24      34 ..     810     820 ..     809     821 .. 0.80
   2 !   18.2   8.6   1.1e-06    0.0017       1      35 [.     881     915 ..     881     926 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 8.8
  zf-C3HC4_2  24 qkCilrsLeek 34 
                 q+C ++sL+++
  KHJ35232.1 810 QSCCHPSLTRN 820
                 68999999875 PP

  == domain 2  score: 18.2 bits;  conditional E-value: 1.1e-06
  zf-C3HC4_2   1 kCpiCld..mlkdpsvvtpCgHvfCqkCilrsLeekn 35 
                 +CpiC +  m++    vt C+H++C+kC+l ++++++
  KHJ35232.1 881 ECPICSEepMIE--RIVTTCWHSTCKKCLLDYINHQK 915
                 6****9933455..59**************9998876 PP

>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0  10.3   3.6e-06    0.0054       1      44 []     880     927 ..     880     927 .. 0.82

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 3.6e-06
   zf-RING_2   1 deCpICleelssadsvlllpCgHvfhreClerwlrssst......CPlCr 44 
                 +eCpIC ee    ++++++ C H+ +++Cl ++++++++      C +Cr
  KHJ35232.1 880 NECPICSEEPMI-ERIVTT-CWHSTCKKCLLDYINHQKEkgekprCVTCR 927
                 69****655544.455555.************9999888999*******9 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.1   9.1   2.3e-05     0.035       1      43 [.     881     927 ..     881     928 .. 0.94

  Alignments for each domain:
  == domain 1  score: 14.1 bits;  conditional E-value: 2.3e-05
   zf-RING_5   1 hCnkCfeklskeekfyltsCgHifCekClkkll......ekeavCpiCr 43 
                 +C++C+e+     + ++t+C H+ C+kCl  +       +++ +C +Cr
  KHJ35232.1 881 ECPICSEEP--MIERIVTTCWHSTCKKCLLDYInhqkekGEKPRCVTCR 927
                 6********..9999***************9999999999999*****8 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   9.2   3.8e-05     0.057       1      35 [.     882     923 ..     882     927 .. 0.67

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 3.8e-05
  zf-RING_UBOX   1 CpICl.elftdPlvlpCGHtFCreCl......welskslega 35 
                   CpIC  e++ + +v++C H+ C++Cl      ++++  + + 
    KHJ35232.1 882 CPICSeEPMIERIVTTCWHSTCKKCLldyinhQKEKGEKPRC 923
                   *****55776556678**********8644322444444444 PP

>> DEAD_2  DEAD_2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   0.1    0.0005      0.75     115     164 ..     603     661 ..     588     672 .. 0.79
   2 ?    0.7   0.1      0.24   3.6e+02     101     165 ..     765     838 ..     743     849 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.0005
                 HHHHHCCTSEEEEEHHHHTSC...CCHHHHH......T..GCGCEEEECTCCCHHHHHH CS
      DEAD_2 115 srelledadiiilpYqyLlde...kireslk......gislknsivilDEAhNiedvce 164
                  r++ e  +iii +Y ++l+e    ++++++       +s+k   vilDEAh i++   
  KHJ35232.1 603 CRRISEVPNIIITSYGVVLSEynqVTARNHErssycgLFSMKYFRVILDEAHYIKNRQS 661
                 588899999*******9998732222333324667788999*************99655 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.24
                 HHHHHHCT--HHHHHHHHHC.....CTSEEEEEHHHHTSCCCHHHHH....T..GCGCEEEECTCCCHHHHHHH CS
      DEAD_2 101 velgeklklCPYylsrelle.....dadiiilpYqyLldekireslk....gislknsivilDEAhNiedvcee 165
                 +   e++++  Y l r+ ++     +a  ++  Y  ++ + +r + +    +++ + +ivi  E  Nie  +++
  KHJ35232.1 765 KLSKEEQEVYDYILNRAKQSfeanvEAGTVLKAYTSIFAHVMRLRQScchpSLTRNPKIVIDEEEANIETDIAD 838
                 445566666666666644331111167779999999999988877777778888899999999999*9987766 PP

>> zf-C3HC4_4  zinc finger of C3HC4-type, RING
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   8.6     0.013        19       1      42 []     882     926 ..     882     926 .. 0.75

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.013
  zf-C3HC4_4   1 CPiCld.YLekPvsleCGhsfClsCisslqkepdgeq..llCplC 42 
                 CPiC++  + + +   C hs C +C+  + +++++++   +C  C
  KHJ35232.1 882 CPICSEePMIERIVTTCWHSTCKKCLLDYINHQKEKGekPRCVTC 926
                 ****962455556789**********9997766554333899988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       664  (0.037035); expected 358.6 (0.02)
Passed bias filter:                      421  (0.0234815); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.77u 0.27s 00:00:01.04 Elapsed: 00:00:00.46
# Mc/sec: 7426.93
//
Query:       KHJ35233.1  [L=333]
Description: putative na+ h+ antiporter nha1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-61  208.2   4.7    1.9e-61  208.0   4.7    1.0  1  Na_H_Exchanger  Sodium/hydrogen exchanger family
    0.00059   19.9   0.2      0.022   14.8   0.0    2.6  2  YrhC            YrhC-like protein
  ------ inclusion threshold ------
        1.1    9.3  15.2        4.1    7.5   2.4    3.3  2  ECF_trnsprt     ECF transporter, substrate-specific component
          3    7.5   7.6       0.35   10.6   0.9    2.4  3  Cation_efflux   Cation efflux family


Domain annotation for each model (and alignments):
>> Na_H_Exchanger  Sodium/hydrogen exchanger family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  208.0   4.7   4.2e-65   1.9e-61      13     296 ..       6     306 ..       1     327 [. 0.95

  Alignments for each domain:
  == domain 1  score: 208.0 bits;  conditional E-value: 4.2e-65
                     HHHHHTTSXHHHHHHHHHHHHTTTTTS..........HHHCHCCHHHHCHHCCHHHHCTCGCCTGCCTHHHHHHHHHHHHHHHHHHHHHHHH.HH CS
  Na_H_Exchanger  13 llarrlklpeivgliiaGlllGpsglglieps.....eedlevlselglilllFlaGleldlrelrknlksilllallgvlitvvliGlllylll 102
                     ++ ++l+++e +++ i+G+++Gp+  +li+p      + ++ ++s+++l+++ F++G+el+  ++ k++ks++ l+l+ ++  + +++l++++ +
      KHJ35233.1   6 FIKEKLYIGEATVATICGIIFGPHAANLIDPLswgntDQITLEFSRIVLVVQCFAVGVELPKYYVEKHWKSVFYLLLPIMVCGWMTTSLIIWW-M 99 
                     3599****************************************************************************************8.8 PP

                     TXTTCHHHHHHHHHHHTSSXHHHHHHHC....CCCTSTCCCCCCHHHHHHHHHHHCCCCCHHHHHHTX.XXXXTSSSTSXHHHHHHHHHHHHHHH CS
  Na_H_Exchanger 103 ilgiplleallfgailsatdpvvvlailk...eegrvperlgtlllgesvlnDavavvllavllalak.eeaggetslllllliflvvavgglll 193
                     i+++++l++l ++a+++atdpv++++++    +++rvp++l+ ll +es+ nD++a+++++++l l++   ++  ++ ++++l++l+++v+g++ 
      KHJ35233.1 100 IPPLNWLDSLCIAACVTATDPVLASSVVGkgkFARRVPKHLRDLLSAESGANDGMAFPFIYLALYLIEhRPNANKVAFSWFVLTILYECVFGCIY 194
                     ****************************9999***********************************987788899999**************** PP

                     HHHHHHHHHHHHHHS....CTHHHHHHHHHHHHHHHHHHHHHTSXXXHHHHHHHHHHHHH.HHHHHTTHHHH.HHHHHHHHHHHHHHHHHHHHSX CS
  Na_H_Exchanger 194 glvigwllrlitrft....dddrelevllvlllallaallaellgvsgilgaflaGlvls.eyefsnklsek.lesfreglfnplfFvlvGlsld 282
                     g++ig++ r  ++f+      d+e++++++++lal++a+ +++lgv+++l+ f aG+ +s +++f +k++e+ ++ +++ l+n  +Fv++G+ ++
      KHJ35233.1 195 GFIIGYIGRQGIKFSakhdLVDKESFLVFYFVLALFCAGSGSILGVDDLLVGFSAGVGFSnDGWFQKKTEEShVSDVIDLLLNLTYFVYLGTIIP 289
                     ****************988889************************************************************************* PP

                     HHHHHX...XHHHHHHH CS
  Na_H_Exchanger 283 lkvlnn...hlsvlilv 296
                     ++ +nn   ++  ++lv
      KHJ35233.1 290 WEQFNNakyGITPWRLV 306
                     *9998888766666666 PP

>> YrhC  YrhC-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.0   0.1     0.051   2.3e+02      13      51 ..      49      86 ..      48      97 .. 0.72
   2 !   14.8   0.0   4.9e-06     0.022      17      56 ..     275     313 ..     272     319 .. 0.73

  Alignments for each domain:
  == domain 1  score: 2.0 bits;  conditional E-value: 0.051
        YrhC 13 FafvLLalsaFLyiGlviPseaketlkksillgaivvfL 51
                F+ + L +  F  +G+ +P+ ++e++ ks++++   +++
  KHJ35233.1 49 FSRIVLVVQCF-AVGVELPKYYVEKHWKSVFYLLLPIMV 86
                66677777666.79***********99999887654443 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 4.9e-06
        YrhC  17 LLalsaFLyiGlviPseaketlkksillgaivvfLllafl 56 
                 LL l+ F y+G++iP e+ ++ +k+ + +  +v L+ + +
  KHJ35233.1 275 LLNLTYFVYLGTIIPWEQFNN-AKYGITPWRLVDLARSSF 313
                 9**************966655.455555666665555555 PP

>> ECF_trnsprt  ECF transporter, substrate-specific component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   2.4   0.00092       4.1      88     132 ..      63     107 ..      13     132 .. 0.66
   2 ?    5.7   3.2    0.0031        14      32      55 ..     179     205 ..     154     239 .. 0.67

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.00092
                  HHHHHCCCHTTHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHS.. CS
  ECF_trnsprt  88 gllykkgkkknlkeivvsfilagvlgtivatllvlliilplylkl 132
                  + l k++  k +k ++  ++ ++v+g ++  l+ +++i pl + +
   KHJ35233.1  63 VELPKYYVEKHWKSVFYLLLPIMVCGWMTTSLIIWWMIPPLNWLD 107
                  24678899******************************9998644 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0031
                  HHHHHHHHHHCTTCHHHHHHHHH...H CS
  ECF_trnsprt  32 ihipvllggllfGpikGailgii...t 55 
                   +++++l  ++fG i+G+i+g i   +
   KHJ35233.1 179 WFVLTILYECVFGCIYGFIIGYIgrqG 205
                  489999***************996441 PP

>> Cation_efflux  Cation efflux family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       2.1   9.6e+03     154     173 ..      18      36 ..      16      37 .. 0.61
   2 ?    0.1   0.2      0.12   5.5e+02     149     176 ..      85     111 ..      75     117 .. 0.80
   3 ?   10.6   0.9   7.8e-05      0.35      37     120 ..     152     234 ..     146     240 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 2.1
  Cation_efflux 154 lvsalvillfnlksgplaDp 173
                    + ++ +i++++++  +l+Dp
     KHJ35233.1  18 VATICGIIFGPHAA-NLIDP 36 
                    45666667776664.78887 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.12
  Cation_efflux 149 tslgvlvsalvillfnlksgplaDpvas 176
                    +  g + ++l+i+++  +  +++D+++ 
     KHJ35233.1  85 MVCGWMTTSLIIWWMIPPL-NWLDSLCI 111
                    5678888999999998876.99999875 PP

  == domain 3  score: 10.6 bits;  conditional E-value: 7.8e-05
  Cation_efflux  37 dlvsllllllalkls.rkppderfpfGygrlevlgalvsgllllglavfllleaiqklikegereihaglalvvalvslvvnlal 120
                    d +++ +++lal+l+ ++p+ +++ f ++ l  l+  v g++  +++ ++  ++i+ +   ++++++ +  lv+ +v ++++  +
     KHJ35233.1 152 DGMAFPFIYLALYLIeHRPNANKVAFSWFVLTILYECVFGCIYGFIIGYIGRQGIK-FS-AKHDLVDKESFLVFYFVLALFCAGS 234
                    566777899**********************************************5.55.5888888888888888877777655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (333 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       651  (0.0363099); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2426.54
//
Query:       KHJ35234.1  [L=389]
Description: putative squalene phytoene synthase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-41  141.9   0.0    4.8e-41  141.0   0.0    1.4  1  SQS_PSY   Squalene/phytoene synthase


Domain annotation for each model (and alignments):
>> SQS_PSY  Squalene/phytoene synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.0   0.0   2.7e-45   4.8e-41       8     263 .]      61     375 ..      54     381 .. 0.93

  Alignments for each domain:
  == domain 1  score: 141.0 bits;  conditional E-value: 2.7e-45
                 HHHHHTTS-HHHHHHHHHHHHHHHHHT-.-----........------------..---------THHHHHHHHHHHT.........--HHHHHHHHHH CS
     SQS_PSY   8 fylaslllppelRdalgalYafcreaddlvDdvseplqararldwwrdavdavyaedklkpprepvlralaqlirtyk.........lpkelllelieg 97 
                  +    ++p  +Rda++ ++a+++e++++++  s+p+++  r+++wrd++++++   ++ pp+ pv+++l ++i+  +         ++k+++l++i++
  KHJ35234.1  61 SFTLQTFIPTTSRDAYLSIRALNVELARIPELISSPKIGALRMEFWRDNINKIF---EGIPPKGPVAILLSNAISSLHlqhagiqtgMIKAWCLKIINA 156
                 55666799**********************************************...99**************999999999***************** PP

                 TS--SS-..--SHHHHHHHHHHHHHHHHHHHHHHH-S.S-HHHHHHHHHHHHHHHHHHHHHT---SH........................HHHTT..S CS
     SQS_PSY  98 meadleftryetlddLeeYcyrvagvVgelclrllgarrsdralaeaarrlGkalQltnilRdvpeD........................aergrvyL 172
                 +e+ +++++y ++++Le+Y++++++ + + +l+ l++ +s  ++++ a+++Gka ++  +l+ +p                            r +v L
  KHJ35234.1 157 REKYMDNRPYTNMEALEDYAENTYSNILYITLAALPV-NSL-TVDHIASHIGKANGIAAVLKGLPLIafpsnsnhyinsaksilesggkfnGSREAVVL 253
                 *************************************.677.69*********************999*********************9988999*** PP

                 -HHHHHHHT--HHHHHHT-.-SHH.HHHHHHHHHHHHHHHHHHHHHTGGG.................................S.-HHHHHHHHHHHHH CS
     SQS_PSY 173 Padvlkefgvseedllrkgvrsae.lrallrrlaerArelldearellkq.................................lpdrrarpalllaval 237
                 P dv+++ g++eed++r g  +a  l+++++ +a+rA+++l++a e+l++                                 l  ++  +++++++  
  KHJ35234.1 254 PLDVMTKIGLKEEDVYRLG-SNAPgLKDAVFTVATRANDHLITAKEMLNRarlgqdvghdylhahneghsysvsnptprtvanL--IEKSFGVFMPAIA 349
                 *******************.78888*******************************************************9662..55689999***** PP

                 HHHHHHHHHHTTT-TTT------HHH CS
     SQS_PSY 238 yrailerieaadydvlsrrvklsllr 263
                     le++e+ ++d+++ +++++ +r
  KHJ35234.1 350 TKIWLEKLEKFEFDIFNPKLRIQDWR 375
                 **************756666655554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (389 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       415  (0.0231469); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.23s 00:00:00.73 Elapsed: 00:00:00.40
# Mc/sec: 2933.53
//
Query:       KHJ35235.1  [L=192]
Description: putative na+-h+ antiporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.4e-25   87.7   1.3      1e-24   87.6   1.3    1.0  1  Nha1_C    Alkali metal cation/H+ antiporter Nha1 C terminus


Domain annotation for each model (and alignments):
>> Nha1_C  Alkali metal cation/H+ antiporter Nha1 C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.6   1.3   5.8e-29     1e-24       1     129 [.      53     175 ..      53     192 .] 0.72

  Alignments for each domain:
  == domain 1  score: 87.6 bits;  conditional E-value: 5.8e-29
      Nha1_C   1 WMnRLPrldsqsrSfSlrrvdt.sdtsedekkepefppgtlgppvrpaGgflRRqkeed....rskkksrsssererrqrekkkwddglglGgpisqsa 94 
                 W nRLP+++s+srS+   ++ +   t+e+e+k  ++ppg+l pp++++ +flRRqkee+    +    sr+++  er++  +  w+d +g+Ggpis sa
  KHJ35235.1  53 WVNRLPKITSTSRSQ---AKSIsLGTDENELKIGDLPPGML-PPIGIPREFLRRQKEEEspvyNVYPVSRNRN--ERKK--SMLWEDEVGPGGPISRSA 143
                 ***************...777778888999***********.***************7745444444444444..3444..678*************** PP

      Nha1_C  95 ifpqrrseseeepessteeeeseeesepesessat 129
                 ifpqr+se + e+++  ++ +   es +++++  +
  KHJ35235.1 144 IFPQRESEVHIESNDRVTSGK---ESPKNEKNLLK 175
                 *******99988444444333...22222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1451.32
//
Query:       KHJ35236.1  [L=134]
Description: hypothetical protein EV44_g5900 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      266  (0.0148363); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1019.25
//
Query:       KHJ35237.1  [L=559]
Description: putative rna- rbd [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.2e-33  113.3   0.1      1e-15   57.3   0.0    2.4  2  RRM_1          RNA recognition motif. (a.k.a. RRM, RBD, or RN
    1.6e-10   40.9   0.3    0.00037   20.5   0.0    2.9  2  RRM_7          RNA recognition motif
     0.0011   18.9   0.1       0.55   10.3   0.0    2.4  2  Nup35_RRM_2    Nup53/35/40-type RNA recognition motif
  ------ inclusion threshold ------
      0.046   12.9   0.1        1.7    7.8   0.0    2.6  3  Phytochelatin  Phytochelatin synthase
      0.092   12.8   0.0        8.6    6.5   0.0    2.5  2  RRM_3          RNA binding motif
       0.14   11.9   0.3         11    5.7   0.0    2.6  2  OB_RNB         Ribonuclease B OB domain


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.7   0.0   4.5e-18   1.4e-14       2      52 ..     117     168 ..     116     183 .. 0.93
   2 !   57.3   0.0   3.4e-19     1e-15       1      57 [.     200     257 ..     200     264 .. 0.97

  Alignments for each domain:
  == domain 1  score: 53.7 bits;  conditional E-value: 4.5e-18
                 EEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHH CS
       RRM_1   2 fVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedA 52 
                 f+g+L++++t++ Lke+Fs+fG+++++ ++rd   g+s+gf+f +F++ +  
  KHJ35237.1 117 FIGGLNWETTDQSLKEYFSQFGEVVECMVMRDgVSGRSRGFGFLTFKDARTV 168
                 9**********************************************98866 PP

  == domain 2  score: 57.3 bits;  conditional E-value: 3.4e-19
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHH CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAle 57 
                 +fVg++++++te++ ke+F +fG+i++++l+ d  tg+++gf+fV+F+s+ + +++l+
  KHJ35237.1 200 IFVGGVSQEATEQDFKEYFMQFGRIVDATLMIDkDTGRPRGFGFVTFDSEAAVDACLS 257
                 8*****************************************************9986 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   1.2e-07   0.00037       3      66 ..     115     171 ..     113     181 .. 0.77
   2 !   17.4   0.1   1.2e-06    0.0035       2      67 ..     198     256 ..     197     261 .. 0.80

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 1.2e-07
       RRM_7   3 kvFvGGlPiDiteeelkatfkefgkvlvdwPkkaeskkkaaenskaakgyvflvfedeksvkaL 66 
                 k+F+GGl ++ t+++lk+ f++fg+v+ +          +  +s   +g+ fl f+d ++v+ +
  KHJ35237.1 115 KMFIGGLNWETTDQSLKEYFSQFGEVV-ECM------VMRDGVSGRSRGFGFLTFKDARTVNIV 171
                 99**********************985.332......222222233469999999999999765 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 1.2e-06
       RRM_7   2 rkvFvGGlPiDiteeelkatfkefgkvlvdwPkkaeskkkaaenskaakgyvflvfedeksvkaLl 67 
                  k+FvGG+  + te++ k+ f +fg++ vd      +++ +       +g+ f+ f++e +v a l
  KHJ35237.1 198 SKIFVGGVSQEATEQDFKEYFMQFGRI-VDATLMIDKDTGR------PRGFGFVTFDSEAAVDACL 256
                 69***********************97.5655444443333......3699999999999998765 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.1   0.0    0.0036        11      19      46 ..     132     165 ..     125     170 .. 0.82
   2 !   10.3   0.0   0.00018      0.55       4      47 ..     200     250 ..     198     255 .. 0.74

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0036
  Nup35_RRM_2  19 ehFasfGeIvkhyvp......kevsvmyvkfese 46 
                  e+F +fGe+v+  v       +++ + +++f++ 
   KHJ35237.1 132 EYFSQFGEVVECMVMrdgvsgRSRGFGFLTFKDA 165
                  7**********77777888887788888888875 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00018
  Nup35_RRM_2   4 vaVsGydteli.elVlehFasfGeIvk......hyvp..kevsvmyvkfesek 47 
                  + V G+++e   ++  e+F +fG+Iv+      +  +  + + + +v+f se 
   KHJ35237.1 200 IFVGGVSQEATeQDFKEYFMQFGRIVDatlmidK--DtgRPRGFGFVTFDSEA 250
                  67889998866589999**********5554333..15566788888888775 PP

>> Phytochelatin  Phytochelatin synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0     0.036   1.1e+02     187     210 ..     134     157 ..     129     160 .. 0.85
   2 ?    7.8   0.0   0.00056       1.7     183     211 ..     214     242 ..     207     244 .. 0.90
   3 ?   -2.3   0.2      0.68     2e+03      31      42 ..     329     340 ..     305     411 .. 0.61

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.036
                    EEEHHHHHHHHSSEETTTTEE-EE CS
  Phytochelatin 187 WvkleeLyeamktlDkatgksRGy 210
                    + ++ e++e m + D ++g+sRG+
     KHJ35237.1 134 FSQFGEVVECMVMRDGVSGRSRGF 157
                    56677899***************9 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.00056
                    ---EEEEHHHHHHHHSSEETTTTEE-EEE CS
  Phytochelatin 183 YppvWvkleeLyeamktlDkatgksRGyv 211
                    ++ +++++ ++++a  ++Dk+tg++RG+ 
     KHJ35237.1 214 FKEYFMQFGRIVDATLMIDKDTGRPRGFG 242
                    7889***********************96 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.68
                    .TTHHHHHHH-- CS
  Phytochelatin  31 aedyfpLaeqfe 42 
                    +++y+ +++q +
     KHJ35237.1 329 MQQYMAMMQQSM 340
                    444444443332 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.0    0.0029       8.6       5      28 ..     117     140 ..     115     167 .. 0.88
   2 ?    3.6   0.0     0.022        66       5      28 ..     201     224 ..     199     278 .. 0.83

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0029
                 EEEE-SSS--HHHHHHHCHCCS-E CS
       RRM_3   5 klsGlnkelsredikellsklgev 28 
                 ++ Gln e++ +++ke +s++gev
  KHJ35237.1 117 FIGGLNWETTDQSLKEYFSQFGEV 140
                 56789*****************99 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.022
                 EEEE-SSS--HHHHHHHCHCCS-E CS
       RRM_3   5 klsGlnkelsredikellsklgev 28 
                 ++ G+++e + +d+ke + ++g +
  KHJ35237.1 201 FVGGVSQEATEQDFKEYFMQFGRI 224
                 5779*****************976 PP

>> OB_RNB  Ribonuclease B OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0      0.02        59       3      15 ..     150     162 ..     149     172 .. 0.84
   2 ?    5.7   0.0    0.0038        11       5      18 ..     236     249 ..     235     257 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.02
                 EEE-SSS-EEEEE CS
      OB_RNB   3 vrahkkGFGFlip 15 
                 v++ ++GFGFl  
  KHJ35237.1 150 VSGRSRGFGFLTF 162
                 67899*****975 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0038
                 E-SSS-EEEEECT. CS
      OB_RNB   5 ahkkGFGFlipdeg 18 
                 + ++GFGF+  d++
  KHJ35237.1 236 GRPRGFGFVTFDSE 249
                 5689*******983 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (559 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       897  (0.0500307); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.30s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 3807.34
//
Query:       KHJ35238.1  [L=464]
Description: putative histone h1-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-10   40.4   1.1    1.5e-10   40.4   1.1    2.3  2  SHNi-TPR     SHNi-TPR
     0.0018   17.9   5.8     0.0033   17.0   4.2    2.1  2  MscS_porin   Mechanosensitive ion channel porin domain
  ------ inclusion threshold ------
      0.011   15.6   4.8       0.51   10.4   2.5    2.8  2  SOAR         STIM1 Orai1-activating region
      0.019   15.2   0.1      0.019   15.2   0.1    2.7  3  TPR_12       Tetratricopeptide repeat
      0.024   14.9   0.2       0.13   12.6   0.0    2.4  2  kleA_kleC    Uncharacterized KorC regulated protein A
      0.051   13.7   1.8       0.17   12.0   1.8    1.9  1  DUF2730      Protein of unknown function (DUF2730)
      0.069   13.6   0.0       0.34   11.4   0.0    2.2  1  TPR_17       Tetratricopeptide repeat
      0.081   13.4   0.1      0.081   13.4   0.1    2.5  4  TPR_19       Tetratricopeptide repeat


Domain annotation for each model (and alignments):
>> SHNi-TPR  SHNi-TPR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   1.1   6.5e-14   1.5e-10       1      37 [.     227     263 ..     227     264 .. 0.96
   2 ?   -1.9   0.1         1   2.3e+03      20      36 ..     311     330 ..     309     331 .. 0.57

  Alignments for each domain:
  == domain 1  score: 40.4 bits;  conditional E-value: 6.5e-14
    SHNi-TPR   1 AdvydlLGEislEnenFpqAveDlrkaLeLreqllpp 37 
                 Ad++d L+EislEne F+ Av D +++L+++ ql+  
  KHJ35238.1 227 ADTHDHLAEISLENESFSAAVADCKASLAYKKQLYAE 263
                 9*********************************976 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1
    SHNi-TPR  20 AveDlrkaL...eLreqllp 36 
                 A+e+ ++a+   +Lr+q+++
  KHJ35238.1 311 AAEEMEAAIkstNLRLQNKE 330
                 66666655522268888776 PP

>> MscS_porin  Mechanosensitive ion channel porin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   4.2   1.5e-06    0.0033      58     134 ..     290     368 ..     274     381 .. 0.87
   2 ?   -1.1   0.0      0.49   1.1e+03     112     135 ..     391     414 ..     382     431 .. 0.64

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 1.5e-06
  MscS_porin  58 qelealqkkkeeaskeilaklsleeLeqrllqtssqlqelqeqlaqlns..qlvelqtrperaqqqltearqrlqeirn 134
                  e+e ++k+k +++ ++l++   ee e  +++t+ +lq+ ++ la+lns  ++ + +++++++ + l+e ++rl+e+r+
  KHJ35238.1 290 DEIEIENKEKVSETDKSLRNEAAEEMEAAIKSTNLRLQNKESLLATLNSpkEVETVRNQITEIKEMLSELQTRLEELRT 368
                 578888999***************************************7547888888888888888888888888875 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.49
  MscS_porin 112 qtrperaqqqltearqrlqeirnr 135
                  t++++a +++ ea++  +++++ 
  KHJ35238.1 391 PTALNEADTRIEEAKKMANDVTDL 414
                 456666666666666666666654 PP

>> SOAR  STIM1 Orai1-activating region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   2.5   0.00023      0.51      25      86 ..     307     366 ..     295     370 .. 0.85
   2 ?    4.1   0.0      0.02        44      51      87 ..     382     419 ..     379     424 .. 0.77

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00023
        SOAR  25 kkqeaekqlqeAkeeve.klkkkrssllgslrlahssslddvdkkileakqaleevtkelker 86 
                  ++ea++++++A ++ + +l+ k +sll++l +   ++++ v ++i+e+k+ l+e+++ l+e 
  KHJ35238.1 307 LRNEAAEEMEAAIKSTNlRLQNK-ESLLATLNS--PKEVETVRNQITEIKEMLSELQTRLEEL 366
                 5899999*****99876366666.99***9986..57999********************996 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.02
        SOAR  51 lgslrla.hssslddvdkkileakqaleevtkelkerq 87 
                 +++l ++ + + l++ d++i eak+  ++vt  ++ ++
  KHJ35238.1 382 VSKLSILnAPTALNEADTRIEEAKKMANDVTDLVRKKS 419
                 666666623467999************99998777665 PP

>> TPR_12  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.2   0.1   8.6e-06     0.019      15      61 ..      41      87 ..      39      89 .. 0.94
   2 ?    0.3   1.2      0.38   8.5e+02       4      55 ..     228     279 ..     225     283 .. 0.84
   3 ?   -3.3   0.0       5.3   1.2e+04      60      76 ..     400     416 ..     394     417 .. 0.72

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 8.6e-06
      TPR_12 15 rlgrydeAlellekaleiarrllGpdhpltattlrnLgrlyralgry 61
                + ++y+ A +++ +a e++ +l G+ +p+ a++l+ +gr +++lg+ 
  KHJ35238.1 41 AEKNYELAADFYSRASELQVELNGEMNPENAEILFRYGRSLFKLGQS 87
                689*****************************************986 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.38
      TPR_12   4 talnnlaavlrrlgrydeAlellekaleiarrllGpdhpltattlrnLgrly 55 
                  ++ +la++ ++ + +  A + ++++l+  ++l+ ++    a++ + L+ ++
  KHJ35238.1 228 DTHDHLAEISLENESFSAAVADCKASLAYKKQLYAEEESIIAEAHFKLSLAL 279
                 5565799999999999999999999999999999999889999999998876 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 5.3
      TPR_12  60 ryeeAlelleealaiae 76 
                 r eeA ++ ++++++ +
  KHJ35238.1 400 RIEEAKKMANDVTDLVR 416
                 66788888888877765 PP

>> kleA_kleC  Uncharacterized KorC regulated protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1         2   4.5e+03      20      33 ..     305     318 ..     294     327 .. 0.71
   2 ?   12.6   0.0   5.9e-05      0.13      17      60 ..     340     383 ..     335     408 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 2
   kleA_kleC  20 varRdkiAaklaeA 33 
                 ++ R++ A+ ++ A
  KHJ35238.1 305 KSLRNEAAEEMEAA 318
                 55688888888776 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 5.9e-05
   kleA_kleC  17 tdlvarRdkiAaklaeAeeLvrqaeeLRakvyeesaaLedrakk 60 
                 +++   R++i +  +   eL+ + eeLR+ v+  ++aL +    
  KHJ35238.1 340 KEVETVRNQITEIKEMLSELQTRLEELRTPVFDVKSALYGPLVS 383
                 577889*******************************9886655 PP

>> DUF2730  Protein of unknown function (DUF2730)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   1.8   7.7e-05      0.17      35      91 ..     312     368 ..     303     371 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 7.7e-05
     DUF2730  35 leklaekveendkrlteletkvenLPtakdlekLkllladlrgelkaleaevrqlsh 91 
                  e+++  +++++ rl++ e+ +++L + k++e+++ ++++++  l++l+ ++++l++
  KHJ35238.1 312 AEEMEAAIKSTNLRLQNKESLLATLNSPKEVETVRNQITEIKEMLSELQTRLEELRT 368
                 567777899*******************************************99986 PP

>> TPR_17  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00015      0.34       7      30 ..      65      88 ..      65      89 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00015
      TPR_17  7 eldPnnadaynnLAelllknGdlm 30
                e +P na+ ++ +++ l k+G+++
  KHJ35238.1 65 EMNPENAEILFRYGRSLFKLGQSK 88
                68********************86 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   3.6e-05     0.081       2      40 ..      40      86 ..      39      89 .. 0.87
   2 ?   -3.0   0.0       4.8   1.1e+04      26      37 ..     183     197 ..     176     199 .. 0.56
   3 ?   -3.5   0.1       7.3   1.6e+04       2      20 ..     238     256 ..     233     263 .. 0.64
   4 ?   -3.6   0.0       7.5   1.7e+04      40      52 ..     400     412 ..     400     417 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 3.6e-05
      TPR_19  2 laegdyaeAlalleqalqe........dpknaearllLAeallalgq 40
                +ae++y+ A++++++a +         +p+nae++ ++ + l++lgq
  KHJ35238.1 40 YAEKNYELAADFYSRASELqvelngemNPENAEILFRYGRSLFKLGQ 86
                6899************95566666666*******************9 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 4.8
      TPR_19  26 earl...lLAealla 37 
                 +a+    +LA++l++
  KHJ35238.1 183 AAAFdvlDLARVLFE 197
                 444433377887776 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 7.3
      TPR_19   2 laegdyaeAlalleqalqe 20 
                 l+++ + +A+a  ++ l++
  KHJ35238.1 238 LENESFSAAVADCKASLAY 256
                 5566666666666665554 PP

  == domain 4  score: -3.6 bits;  conditional E-value: 7.5
      TPR_19  40 qldeAealLdalp 52 
                 +++eA+++ +++ 
  KHJ35238.1 400 RIEEAKKMANDVT 412
                 6899999988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (464 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1930  (0.107647); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.61u 0.22s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3346.73
//
Query:       KHJ35239.1  [L=1068]
Description: putative ribosomal protein l19 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-27   95.8  23.8    2.1e-27   95.7   6.6    3.0  3  FUSC_2    Fusaric acid resistance protein-like
    1.7e-06   27.2  11.5     0.0057   15.5   1.4    3.7  4  ALMT      Aluminium activated malate transporter
    0.00033   19.8   5.6    0.00094   18.3   0.6    2.6  2  ArAE_2_N  Putative ER transporter, 6TM, N-terminal
     0.0046   15.6  16.5       0.42    9.1   0.0    3.6  4  FUSC      Fusaric acid resistance protein family
  ------ inclusion threshold ------
      0.023   14.5   0.1      0.093   12.5   0.0    2.0  2  ArAE_2    Aromatic acid exporter family member 2


Domain annotation for each model (and alignments):
>> FUSC_2  Fusaric acid resistance protein-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   8.0    0.0056        20       7     101 ..     134     243 ..     122     271 .. 0.61
   2 ?   -0.2   0.1      0.29     1e+03      28      56 ..     254     282 ..     246     288 .. 0.84
   3 !   95.7   6.6   5.9e-31   2.1e-27       8     127 .]     703     839 ..     690     839 .. 0.86

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0056
      FUSC_2   7 ellglwrgeWalitaaivlsp..tlgasltravqRilGtvlGavlalllly...llpgn...lalallvfllvfli......afflkrny..alafifl 89 
                 ++lg++ g  +++t+++  +p  ++g+ +  av  ++ ++ + vl+ll+ +   +++++   + +a  ++l++f++       +f++++    +++++ 
  KHJ35239.1 134 RFLGHQDGKHIVATVMVFFHParSAGSMAEAAVLGFASVAYATVLGLLSMAisvFFETQcdmIEIAYGLILIFFCGgglglvGWFKQNSNspLVGVAC- 231
                 679****************9997888888888888877666666666655322234443345444443444444434444557888755532444444. PP

      FUSC_2  90 tllalllyslaa 101
                 +l+ l+++s+ +
  KHJ35239.1 232 SLTSLSVISILT 243
                 444444444433 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.29
      FUSC_2  28 tlgasltravqRilGtvlGavlallllyl 56 
                 +++  l+ +++  +G ++ a+l++ll+ +
  KHJ35239.1 254 SYEKILQVIKMVAIGITMSAFLSFLLWPV 282
                 6777888999999***********99965 PP

  == domain 3  score: 95.7 bits;  conditional E-value: 5.9e-31
      FUSC_2   8 llglwrgeWalitaaivlsptlgasltravqRilGtvlGavlallllyllpgn.lalallvfllvfliaffl...krnyalafifltllalllyslaa. 101
                 ++++wrgeW l+++++v+s+t+gas+t +  R++Gt++Ga++a+ ++ + +gn  ala++++l+++  ++++   +++++++ i+lt+++ +lys++  
  KHJ35239.1 703 FYQHWRGEWGLLSYMLVCSTTIGASNTVGSSRFIGTIIGALIAITIWIICQGNvCALAFCGWLISLPCFYLIiakGKGPFGRYIMLTYNLSCLYSYSLs 801
                 599**************************************************99999999999666655442327889************99999988 PP

      FUSC_2 102 .gsgnpie...........ialhRlldvliGiliallv 127
                  ++g++ +           ialhRl+ vl G++++++v
  KHJ35239.1 802 iEDGDDDDdeggiapiisqIALHRLVSVLTGVVWGMIV 839
                 84444444689************************996 PP

>> ALMT  Aluminium activated malate transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.9   0.0       1.3   4.6e+03      74     102 ..     123     152 ..     120     156 .. 0.83
   2 !   11.3   0.1   3.1e-05      0.11     152     229 ..     262     341 ..     238     351 .. 0.88
   3 !   15.5   1.4   1.6e-06    0.0057      11      85 ..     678     753 ..     673     773 .. 0.84
   4 !    5.4   0.2    0.0019       6.8     145     174 ..     819     848 ..     816     857 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.9 bits;  conditional E-value: 1.3
        ALMT  74 Gglalgvselasssgki.leeivigvsvFi 102
                 G+l+ +   l + +g++ +++iv +v+vF+
  KHJ35239.1 123 GSLGTFFPPLTRFLGHQdGKHIVATVMVFF 152
                 889999999999999865789999999997 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 3.1e-05
        ALMT 152 fltiaiGaliclivsifvfPiwaGedLhklvaknleklakslegcvdeyleekeker..kileyeakeedslysgyksvl 229
                 + ++aiG++++ ++s +++P+ a +dL +++ +  ++  ++l+ +  ++l  +e+e   +i ++ +k++++++ + +  l
  KHJ35239.1 262 IKMVAIGITMSAFLSFLLWPVSARKDLRETMTEAADSAGEMLSIITRGFLTGSENEIrsSIFTNAQKKHKKAFAKMNVCL 341
                 6689**********************************************999998778899999999999998876655 PP

  == domain 3  score: 15.5 bits;  conditional E-value: 1.6e-06
        ALMT  11 vvfslkvGlaltLvsllyfl...rplykelgknavWailTVvvvlefsvGATlskGlnRalaTliAGglalgvselas 85 
                 + f++kvG+  ++ +l+ ++   rp+y++    + W  l  ++v   ++GA    G  R+++T+i+  +a+ +  +++
  KHJ35239.1 678 IRFAIKVGIGASIYALIAYIpatRPFYQHW--RGEWGLLSYMLVCSTTIGASNTVGSSRFIGTIIGALIAITIWIICQ 753
                 569******999999988862225555554..456*************************************999885 PP

  == domain 4  score: 5.4 bits;  conditional E-value: 0.0019
        ALMT 145 ielAvkRfltiaiGaliclivsifvfPiwa 174
                  ++A +R+++++ G+++ +iv+ +++P+ a
  KHJ35239.1 819 SQIALHRLVSVLTGVVWGMIVTRIIWPVSA 848
                 589************************977 PP

>> ArAE_2_N  Putative ER transporter, 6TM, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.2   0.6      0.01        36      16      92 ..     110     187 ..     104     199 .. 0.89
   2 !   18.3   0.6   2.6e-07   0.00094     141     284 ..     201     346 ..     191     351 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.01
    ArAE_2_N  16 fKvifRswvavwvaiiLmvipptarwlGt..aayLllivsvivpsGggsvivfilialllllgiclawawaviamkian 92 
                 +K i+++++a  ++++ ++ pp +r lG     + ++ v v+ ++ ++s  ++  +a+l +  +  a++ +++ m i++
  KHJ35239.1 110 AKDILKCSLAYLLGSLGTFFPPLTRFLGHqdGKHIVATVMVFFHP-ARSAGSMAEAAVLGFASVAYATVLGLLSMAISV 187
                 78899999999999999999999999997335799999*******.*******************************97 PP

  == domain 2  score: 18.3 bits;  conditional E-value: 2.6e-07
    ArAE_2_N 141 svvyavllcvflffvgrlrakspkfalgaif...giIaadvfltyapmlPlfapgtlglallkPmgiglalkvvvsllifPttssfqvlktmlkllkll 236
                   +++++ +  l +vg+++++s     g  +   ++ +++++++ a + + f+  +  l+++k ++ig+ ++ ++s+l++P++ +  + +tm ++    
  KHJ35239.1 201 GLILIFFCGGGLGLVGWFKQNSNSPLVGVACsltSLSVISILTKEAAIQTGFFSYEKILQVIKMVAIGITMSAFLSFLLWPVSARKDLRETMTEAADSA 299
                 5688889999999******999885555555011555677889999999999999999**********************************9999887 PP

    ArAE_2_N 237 kkalk.fnsnflatlepsnesewlnfkklekditkirslypkleaelaf 284
                  ++l  +++ fl+ +e +  s  + f + +k   k++++++++  e+ f
  KHJ35239.1 300 GEMLSiITRGFLTGSENEIRS--SIFTNAQKKHKKAFAKMNVCLREAKF 346
                 777762577788888877766..5699****999999999999777766 PP

>> FUSC  Fusaric acid resistance protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.2   3.1       2.5   9.1e+03     441     491 ..     135     185 ..     118     189 .. 0.73
   2 !    6.4   0.0   0.00078       2.8     134     179 ..     264     309 ..     259     328 .. 0.84
   3 !    9.0   2.6   0.00012      0.43      29      69 ..     711     751 ..     679     775 .. 0.85
   4 !    9.1   0.0   0.00012      0.42     124     176 ..     818     871 ..     813     939 .. 0.81

  Alignments for each domain:
  == domain 1  score: -5.2 bits;  conditional E-value: 2.5
        FUSC 441 llarprlagiglglavffalllapqnamtydfatflnsalAlllGvllaav 491
                 +l+++    i+  ++vff    + ++++++ +  f+  a A++lG+l +a+
  KHJ35239.1 135 FLGHQDGKHIVATVMVFFHPARSAGSMAEAAVLGFASVAYATVLGLLSMAI 185
                 555555566677788888888888899999999999999999999887766 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.00078
        FUSC 134 eIvlGIvCaalVsalvfPrsvapalrarlrallrdalalaaaalag 179
                  +++GI  +a+ s l++P s+++ lr+++ ++ ++a + ++ + +g
  KHJ35239.1 264 MVAIGITMSAFLSFLLWPVSARKDLRETMTEAADSAGEMLSIITRG 309
                 599*************************999998888877766665 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.00012
        FUSC  29 wAmtTVfiVsqPlsGavlsKslyRllGTllGaaaavllval 69 
                 w +++ + V++++ Ga+   +  R++GT++Ga+ a+++   
  KHJ35239.1 711 WGLLSYMLVCSTTIGASNTVGSSRFIGTIIGALIAITIWII 751
                 88888899***************************999744 PP

  == domain 4  score: 9.1 bits;  conditional E-value: 0.00012
        FUSC 124 vFdiAvaRvseIvlGIvCaalVsalvfPrsvapalrarlra.llrdalalaaaa 176
                 + +iA+ R+  ++ G+v  ++V  +++P s+++++++ l+  +lr +l + ++ 
  KHJ35239.1 818 ISQIALHRLVSVLTGVVWGMIVTRIIWPVSARKEFQDGLSLlWLRMGLIWKRDP 871
                 5689999*********************99999999888752555555555555 PP

>> ArAE_2  Aromatic acid exporter family member 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.82   2.9e+03       3      72 ..     281     352 ..     281     388 .. 0.58
   2 ?   12.5   0.0   2.6e-05     0.093      60     172 ..     896    1015 ..     886    1035 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.82
      ArAE_2   3 Pksakrlvrktlaktlselgdlyckvlsfaaerlenphihikae.....rdqirkkilevleklaglkgllvllk 72 
                 P+sa++ +r+t+ ++    g++   +++   +    ++++i ++     + +  k + ++   l ++k+ +++l 
  KHJ35239.1 281 PVSARKDLRETMTEAADSAGEMLSIITRGFLTG---SENEIRSSiftnaQKKHKKAFAKMNVCLREAKFEHYILG 352
                 788888888888888888888888877766663...333333331111113333444444444444444444443 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 2.6e-05
      ArAE_2   60 klaglkgllvllkfElslkGrwpskkyarlqalvselvqllarLlvvlkrle.peewlkrllrrvglldpeliadvlavlsmasqaLkt....GdpL 151 
                   l +l++l + +  El+l+G++p k++ ++++ +++++++++++ +++++    +e  k ll+ +     +l+  +  + ++++++Lk      +pL
  KHJ35239.1  896 YLLRLENLRNSAGSELELRGPFPVKEFGQIIDSTTKMLDAFHSMNIIIRTDLiVTEGEKCLLQYTADERAQLCLIISHLYQVLASSLKLeypvNHPL 992 
                  5788899999999*******************************99997633377777777777777777777777777777777777522224677 PP

      ArAE_2  152 Peilpa..pLvkrhlellrkqlk 172 
                  P i+++   L+ + +++ ++  +
  KHJ35239.1  993 PSITKSrdRLLAKIFQYRKDSSD 1015
                  77777632366666665555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1068 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       916  (0.0510904); expected 358.6 (0.02)
Passed bias filter:                      605  (0.0337442); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.82u 0.32s 00:00:01.13 Elapsed: 00:00:00.46
# Mc/sec: 6984.52
//
Query:       KHJ35240.1  [L=536]
Description: putative gtpase-activating protein gyp1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-52  178.1   0.0    3.5e-52  177.2   0.0    1.4  1  RabGAP-TBC       Rab-GTPase-TBC domain
  ------ inclusion threshold ------
       0.11   12.1   0.0       0.36   10.5   0.0    1.9  1  Nbl1_Borealin_N  Nbl1 / Borealin N terminal


Domain annotation for each model (and alignments):
>> RabGAP-TBC  Rab-GTPase-TBC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.2   0.0   3.9e-56   3.5e-52       2     213 ..     221     473 ..     220     475 .. 0.94

  Alignments for each domain:
  == domain 1  score: 177.2 bits;  conditional E-value: 3.9e-56
  RabGAP-TBC   2 elRgevWklllgyep...............evkrlkksekkqeksekeksklekseeskelsqIkkDvprtfpesesfknkqgqnqLeriLkaysiynp 85 
                 e+R+  W++llgy+p               e+ +  +++ +++ s ++++++    ++ +++qI+ Dvprt p+ e   ++ +q++LeriL+++++++p
  KHJ35240.1 221 EVRAMTWQVLLGYLPtsserrvgtldrkrkEYLDGVRQAFEKNSSGSSSTGKARGLDEAIWHQISIDVPRTNPHLELYGYEATQRSLERILYVWAVRHP 319
                 78*************************9999999999999999******************************88************************ PP

  RabGAP-TBC  86 evgYcqGmndivapll.........................lvsldeeeaFwcfvsLlekyklrdlytsslpglkrklkvleellkkkdpklykhlkee 159
                 + gY+qG+nd+v p+                          ++   e ++Fwc+++Ll  ++++d+y+  +pg++r++  l++l  ++d+ l+khl++e
  KHJ35240.1 320 ASGYVQGINDLVTPFWqvflagyvtdsdiesgmdpgqlpkaVLDAVEADSFWCLTKLL--DGIQDNYIFAQPGIQRQVAALRDLTVRIDEPLAKHLESE 416
                 **********************999999999999999999888889999*********..*************************************** PP

  RabGAP-TBC 160 gldlelfaikwfltlflrefpletvlrlwDlll.ege...kfvllrvalailklleee 213
                 ++++ +f+++w+++l++re+++++++r+wD++l e++   +f +l+v++a+l +++e+
  KHJ35240.1 417 NVEFIQFSFRWMNCLLMREISVKNTIRMWDTYLaEEQgfsEF-HLYVCVAFLVKWSEK 473
                 ******************************555255589556.*******98666665 PP

>> Nbl1_Borealin_N  Nbl1 / Borealin N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.0     4e-05      0.36      15      54 ..     191     230 ..     190     232 .. 0.95

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 4e-05
  Nbl1_Borealin_N  15 eRirrlraelelllktlrnrfelellriPkavRkmtmkel 54 
                      +Ri+++++ l+ +  +l +  +++   +P++vR mt++ l
       KHJ35240.1 191 TRINKFKKILQATSINLTSLRAVAWSGVPEEVRAMTWQVL 230
                      69***********************************977 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       994  (0.0554409); expected 358.6 (0.02)
Passed bias filter:                      594  (0.0331307); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.29s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 3788.40
//
Query:       KHJ35241.1  [L=393]
Description: putative c2 domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-11   44.1   0.0    3.4e-11   43.3   0.0    1.4  1  C2        C2 domain


Domain annotation for each model (and alignments):
>> C2  C2 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.0   1.9e-15   3.4e-11      20     103 .]       2      86 ..       1      86 [. 0.90

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 1.9e-15
                 SSCEEEEEEEEECEEEEEE-SC.SSSSSSEEEEEEEEEESC.HTTSEEEEEEEEECSSSTEEEEEEEEEEGHH..HHTTHHHHEEEEH CS
          C2  20 gssdpyvkvsldgkqkakTrvi.knslnPvWnekftfevae.leeakLeveVfdndrlskddfiGkveiplst..llsgeeaegwypl 103
                 g+ +py+ + l gk+ +kT +  +    P+W+++++++v++ +   +L+v+Vf++d+  k ++iG+++i+l++  +l+g + + w++l
  KHJ35241.1   2 GKQNPYCAARL-GKEAKKTVTDhRGGQTPKWDQELRYKVHDsPDYYHLKVSVFNDDK--KTNLIGETKIDLRDiiFLRGGQNDSWHNL 86 
                 6789*******.9999999876455567**************************999..9999**********999999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      292  (0.0162865); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 3005.76
//
Query:       KHJ35242.1  [L=314]
Description: putative adp atp carrier protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.3e-68  226.2   3.9    3.2e-24   84.7   0.1    3.0  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.6   0.0   8.1e-28   1.4e-23       4      95 ..      17     112 ..      15     114 .. 0.93
   2 !   84.7   0.1   1.8e-28   3.2e-24       3      92 ..     121     213 ..     119     216 .. 0.93
   3 !   59.0   0.3   1.8e-20   3.3e-16       4      95 ..     222     310 ..     220     312 .. 0.91

  Alignments for each domain:
  == domain 1  score: 82.6 bits;  conditional E-value: 8.1e-28
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS....HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa....ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 +++ ++l+Gg+++av++++++P+++vK  +q+q+++ k+ + ++    ild++k++  +eG+++l+rG+++n++r++p++al+f++ +t+k +++ 
  KHJ35242.1  17 PFVIDFLMGGVSAAVSKTAAAPIERVKLLIQNQEEMLKSGRLDKkydgILDCFKRVTANEGVASLWRGNTANVIRYFPTQALNFAFRDTYKSMFNF 112
                 57889*****************************99887776667788*********************************************986 PP

  == domain 2  score: 84.7 bits;  conditional E-value: 1.8e-28
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS...HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa...ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrl 92 
                 ++++ +l++Gg+aga++ l+++ ld+++trl +++ks+k+ + ++   ++dv+kk++ ++G++glyrG++p++l+++++++l+f++y+++k +
  KHJ35242.1 121 KWMAGNLASGGAAGATSLLFVYSLDYARTRLANDNKSAKSGGERQfngLVDVYKKTLASDGIAGLYRGFMPSVLGIVVYRGLYFGMYDSIKPV 213
                 57899****************************999988877666888******************************************976 PP

  == domain 3  score: 59.0 bits;  conditional E-value: 1.8e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 ++l++++ G+   ++a+++ +Pld+++ r+++ ++++ k ks   +d+ ++i+ +eG+++l++G+++n+lr +   a  +++y++l+ l++ 
  KHJ35242.1 222 NFLASFILGWSVTTGAGIASYPLDTIRRRMMMTSGEAVKYKS--SFDAGRQIIAKEGVKSLFKGAGANILRGVAG-AGVLSIYDQLQVLFFG 310
                 6899********************************998776..8****************************55.555679**99999875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       361  (0.020135); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.42
# Mc/sec: 2267.31
//
Query:       KHJ35243.1  [L=1338]
Description: putative two-component sensor protein histidine protein kinase (dhkj) [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.4e-21   74.8   0.1    4.1e-20   72.4   0.0    2.3  2  HATPase_c     Histidine kinase-, DNA gyrase B-, and HSP90-lik
    2.3e-17   63.2   0.0    2.1e-14   53.6   0.0    2.8  1  Response_reg  Response regulator receiver domain
      1e-13   51.1   0.0    2.8e-13   49.7   0.0    1.7  1  HisKA         His Kinase A (phospho-acceptor) domain
    1.1e-05   25.7   0.0    4.1e-05   23.9   0.0    2.0  1  GAF_2         GAF domain


Domain annotation for each model (and alignments):
>> HATPase_c  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.4   0.0   9.2e-24   4.1e-20       3     110 ..     805     927 ..     803     929 .. 0.85
   2 ?   -1.6   0.0      0.83   3.7e+03       8      48 ..    1023    1064 ..    1020    1086 .. 0.79

  Alignments for each domain:
  == domain 1  score: 72.4 bits;  conditional E-value: 9.2e-24
                 HHHHHHHHHHHHHHHHHHHSTTTEEEEEEEE..........EE........TEEEEEEEESSSSSTTHHHT.GTCSTTCHHCSTCHTSTSSSHHHHHHH CS
   HATPase_c   3 ekrLrqiisnlvdNavkfatkageieveika..........se........ddlvisveDnGiGipkedlk.klfekfsqddstkrggggtGlGlsivk 82 
                 +  Lr++i nl++N++k+ t  g i v+++           ++          lv++++D+G+Gi +e l  kl  +f q   +++ ++gtGlGlsiv+
  KHJ35243.1 805 PGALRRLIMNLLGNSLKY-TAHGYIIVRLDCheiedfvttgHNgveesiprSMLVFTITDTGRGIAPEFLRnKLYIPFAQ---ENILSSGTGLGLSIVR 899
                 678***************.999999999998666655555500445567778*******************55555****...788899********** PP

                 HHHHHTTTEEEEEEETTTEEEEEEEEES CS
   HATPase_c  83 klvelmgGeiwvesepgrGttftftlpl 110
                 ++v+l++Gei+++se grGt++ +++p 
  KHJ35243.1 900 AIVSLLEGEISIDSEVGRGTQVKVSIPV 927
                 ***********************99885 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.83
                  HHHHHHHHHHHHHHSTTTEEEEEEEEEE...TEEEEEEEESSSS CS
   HATPase_c    8 qiisnlvdNavkfatkageieveikase...ddlvisveDnGiG 48  
                    is l  Navk  ++ ++i v ++  +    d   +veD+ + 
  KHJ35243.1 1023 STISSLALNAVKVHGNYPCIIVICN--QslvRDRIYTVEDTQCK 1064
                  578899999***8667778888888..33555666699998765 PP

>> Response_reg  Response regulator receiver domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.0   4.8e-18   2.1e-14       1     106 [.    1185    1316 ..    1185    1322 .. 0.89

  Alignments for each domain:
  == domain 1  score: 53.6 bits;  conditional E-value: 4.8e-18
                    EEEESSSHHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHH..ESEEEEESSCSSSEHHHHHHHHHHCTTT...................... CS
  Response_reg    1 vlivdDdplvrellrqlleeegyeevaeaedgkealellkeek..vdlillDinmpgmdGlellkeireedpe...................... 71  
                    +l+vdD++++++l++++l ++ y  v++a++g ea++ +++ +  +d+i++Di mp +dG+ ++++ire +++                      
    KHJ35243.1 1185 ILLVDDNQINLRLISTYLSRRAYPCVDTAQNGLEAVQRFEAFSdgYDIIFMDITMPVLDGFGATRKIREMEKKmsssarksvtketmdtfveqkr 1279
                    89*********************9***************998889***********************999444456677788888888888888 PP

                    ..SEEEEEESSTSHHHHHHHHHCTESEEEESSG-HHH CS
  Response_reg   72 ..lpviiltahseeedavealkagaddflsKpfdpee 106 
                        +i++t++s+ ed  ea++ g+d f++Kp+  +e
    KHJ35243.1 1280 kpALIIAFTGRSSTEDQSEAIRSGIDLFMTKPVPFRE 1316
                    8778999999999999999999999999999988776 PP

>> HisKA  His Kinase A (phospho-acceptor) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.7   0.0   6.3e-17   2.8e-13       2      65 ..     631     692 ..     630     693 .. 0.97

  Alignments for each domain:
  == domain 1  score: 49.7 bits;  conditional E-value: 6.3e-17
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHC..T-HSSCHHHHHHHHHHHHHHHHHHHHHHHHCCHH CS
       HisKA   2 lgrflagvaHELrtPLsailgnaeaLkregklteelkeyletiesearrldhlvedlLdlsrie 65 
                 +++f+ +++HELr PL++il+ +e L++   l+   k+++eties++r l++ ++ +Ld+s+i 
  KHJ35243.1 631 KSDFIGSISHELRSPLHGILASVEFLEE--VLSGWEKQLVETIESCGRTLLDTINHILDFSKIN 692
                 899*************************..8*******************************96 PP

>> GAF_2  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   9.3e-09   4.1e-05       5     134 ..      64     217 ..      61     221 .. 0.75

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 9.3e-09
                 HHHHHHHHHHH.HHSS..EEEEEEE-TTS-EEEEEEEES-TTSTT-S-B---TTH.HH..HHHHHTS.................-EEES-GGG-S-HHH CS
       GAF_2   5 eelldlvldel.velgaalgyillvdddgglrlaawgeaeeefgaaldrplgegl.vg..ealrtgr.................pvilndleedpdkkg 82 
                 ++ l   ++   +++g++ ++i l+d+++++ +a ++++ +  +  + +++g+gl +g   +++ gr                  +i+ndl  d++ ++
  KHJ35243.1  64 DTALTVFCQLTaWRMGFQRAMISLIDAETQYFVAESTRTLDLINNDV-HAPGDGLwLGcsSVAKAGRlcestiavaatkdntypHFIVNDLSKDERFNQ 161
                 55555566655589999999******999988887777777776666.345444312233555555555555555555568886677999999****** PP

                 HH..HHHHTT--EEEEEE-T.TS---EEEEES.......--HHHHHHHHHHHHHHH CS
       GAF_2  83 lp..aghaglrsflavPlis.egrvvGvlnlyankppa.fdeedlelLeelaeqia 134
                 lp   g + l++ ++vPli  +g ++G l+++ ++ ++ ++ee+l++L ++a ++ 
  KHJ35243.1 162 LPfvSGPPFLKRYIGVPLITkRGIPIGSLFVVDDRLGDgLSEENLAFLGTMAKTVM 217
                 **98999999999*****99899*******988888778*************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1338 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       844  (0.0470746); expected 358.6 (0.02)
Passed bias filter:                      557  (0.031067); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.88u 0.27s 00:00:01.14 Elapsed: 00:00:00.44
# Mc/sec: 9100.50
//
Query:       KHJ35244.1  [L=929]
Description: putative dynamin family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-44  151.3   0.0    5.6e-44  150.2   0.0    1.6  1  Dynamin_N   Dynamin family
    3.8e-13   49.3   2.3    5.3e-11   42.3   0.9    2.3  2  Dynamin_M   Dynamin central region
    1.4e-05   25.2   0.0    0.00041   20.4   0.0    2.6  1  MMR_HSR1    50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.012   14.9   0.3        1.4    8.2   0.0    2.9  3  Zeta_toxin  Zeta toxin
      0.014   15.8   0.7      0.077   13.4   0.0    2.4  2  AAA_16      AAA ATPase domain
      0.034   13.9   0.0      0.081   12.7   0.0    1.6  1  AAA_21      AAA domain, putative AbiEii toxin, Type IV TA sys
      0.085   13.1   0.1       0.31   11.3   0.0    2.0  2  AAA_28      AAA domain
       0.11   12.3   0.0          4    7.2   0.0    2.6  2  PduV-EutP   Ethanolamine utilisation - propanediol utilisatio
       0.12   12.6   0.0       0.32   11.2   0.0    1.7  1  Roc         Ras of Complex, Roc, domain of DAPkinase
       0.14   12.3   2.4        1.1    9.4   0.3    2.6  2  SRI         SRI (Set2 Rpb1 interacting) domain
        0.2   11.3   0.1        0.2   11.3   0.1    2.3  2  AAA_15      AAA ATPase domain
       0.42   10.4   2.3       0.35   10.7   0.1    2.0  2  Vpu         Vpu protein


Domain annotation for each model (and alignments):
>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  150.2   0.0   3.7e-47   5.6e-44       1     168 []     245     419 ..     245     419 .. 0.98

  Alignments for each domain:
  == domain 1  score: 150.2 bits;  conditional E-value: 3.7e-47
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS---S-EEEEECCT---CCS...SSEEEE....T-EB--CHHHHHHHHHHHHHHHTSSSS--SS-EEEEE CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnptTrrplelqlgeeeeaseravkeelkek....ekkledfsevreeieketekiagankgiskkvillki 95 
                 i+v+GsqSsGKSSvl+aL+g+++lp+g+n++Trrp+el+l +++e     +++e++e+      k++dfs++++++++ +  ++   + +s+++i l+i
  KHJ35244.1 245 IVVIGSQSSGKSSVLEALVGHEFLPKGSNMITRRPIELTLINTPE-----SQDEYGEFptlgLGKIKDFSHIQRTLTELNLAVS-DTQCVSDDPIQLTI 337
                 89*******************************************.....67999999999999*************9999999.999*********** PP

                 EETTS-SEEEEE---B-SSSGTTS.........HHHHHHHSTTEEEEEEEETTS-CCC-CHHHHHHHHSTTBTTEEEEEE-C CS
   Dynamin_N  96 lsllvkgltlvDlPGldsvnkrdq.........elvkeyikkadiilavtsanhdlsnsealflarevdpkgkrtivvltkl 168
                  s++v++l+l+DlPG+++v  +dq         +l+++yi++ ++ila+++a++dl+ns al+ +r vdp+g+rti+v+tk+
  KHJ35244.1 338 SSPHVPDLSLIDLPGYIQVVGQDQpielkqkisDLCDKYIQPPNVILAISAADVDLANSTALRASRRVDPRGERTIGVITKM 419
                 ********************************************************************************95 PP

>> Dynamin_M  Dynamin central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.3   0.9   3.5e-14   5.3e-11       3     131 ..     429     563 ..     428     586 .. 0.82
   2 !    6.0   0.0     0.004       5.9     214     282 ..     643     713 ..     632     716 .. 0.77

  Alignments for each domain:
  == domain 1  score: 42.3 bits;  conditional E-value: 3.5e-14
   Dynamin_M   3 dilenkvipLklGYvgVvnRsqkdI.....nkkksieeal.kkEkaFFeshpay.rkl.adkaGtpyLakkLnqiLvehIrkslPelkkkineklqkle 93 
                  +l+ k++pL+lGYvgVv +  ++      +++ +i++++ ++E+ FF+sh +  ++    ++Gt+ L +kL q+L +    sl + ++ i+++l+++ 
  KHJ35244.1 429 ALLNDKKYPLRLGYVGVVSKVPNQTsslfkKDNSNIAASIaRNEHVFFSSHTQNlENNpGISVGTKTLRRKLMQVLEQTMASSLQTTENSIRQELEEAI 527
                 5799**************996555522232456778777636899******98766666789************************************* PP

   Dynamin_M  94 keleelgeskpsdeektklllqlitkfkedfkklieGe 131
                  e +   +++p   +++++l + +  fk++fk+ ++  
  KHJ35244.1 528 YEFKVQYNDRPL--SAESYLAESLDMFKHSFKEFTQNF 563
                 **9998898888..899**************9998754 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.004
   Dynamin_M 214 Vyeelekivek.lek.elkrFpnLreeikevvedllreqeeptkemienliemelayintnhpdfigalka 282
                 V ++++  v + +++ ++++ p  r++i e+ + +l+e+   t +++en i+  +  i  +++++i++ ++
  KHJ35244.1 643 VANAIQSHVDRlISEsTFASHPFARQTIIEAASAILNERFYSTSDQVENCIKPFKFEIEVEDNEWIRGRDN 713
                 44444555555333359**********************************97777777777777766655 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.0   2.7e-07   0.00041       2      72 ..     245     371 ..     244     404 .. 0.83

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 2.7e-07
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEE..................................................... CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgke..................................................... 47 
                 ++++G   +GKS+++ al+g +   +  +  Tr ++e ++  +  +                                                     
  KHJ35244.1 245 IVVIGSQSSGKSSVLEALVGHEFLPKGSNMITRRPIELTLI-NT-Pesqdeygefptlglgkikdfshiqrtltelnlavsdtqcvsddpiqltissph 341
                 89*********************************999987.22.22457889999999999999999999999999999999**************** PP

                 ...EEEEECGGCSS..HHHHHHHHHHHHHH CS
    MMR_HSR1  48 ...ielvDtpGlie..gaseekglgkafla 72 
                    + l+D+pG i+  g+++  +l++++ +
  KHJ35244.1 342 vpdLSLIDLPGYIQvvGQDQPIELKQKISD 371
                 999********7655555666666666554 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.2   0.0     0.031        46      17      38 ..     244     264 ..     229     276 .. 0.72
   2 ?   -1.7   0.0      0.98   1.5e+03      87     126 ..     491     532 ..     445     534 .. 0.76
   3 ?    8.2   0.0   0.00092       1.4      66     116 ..     621     673 ..     610     677 .. 0.85

  Alignments for each domain:
  == domain 1  score: 3.2 bits;  conditional E-value: 0.031
  Zeta_toxin  17 klillgGqpGAGKselaellkd 38 
                   i++ G++ +GKs+++e+l  
  KHJ35244.1 244 S-IVVIGSQSSGKSSVLEALVG 264
                 4.55567889*******99865 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.98
  Zeta_toxin  87 llqeaiengyniivegtlrsp.dvvkk.laealkkaGYevev 126
                 + ++++ ++   ++e t++s  +++++ + ++l++a Ye +v
  KHJ35244.1 491 VGTKTLRRKLMQVLEQTMASSlQTTENsIRQELEEAIYEFKV 532
                 556677788888999999865256665688888888888776 PP

  == domain 3  score: 8.2 bits;  conditional E-value: 0.00092
  Zeta_toxin  66 kadpkkaseltqkdaselvekllqeaiengyn.iivegtlrspdvvkk.laea 116
                 ++ ++++s+lt+  +++l++++++ ai+  ++ +i e+t++s   +++ ++ea
  KHJ35244.1 621 RKLDASTSNLTKLGIGRLATTVVANAIQSHVDrLISESTFASHPFARQtIIEA 673
                 5567899************************86899******99999844444 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   5.1e-05     0.077       7      44 ..     225     262 ..     220     279 .. 0.82
   2 ?   -0.8   0.1       1.2   1.7e+03      49     107 ..     469     540 ..     462     658 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 5.1e-05
      AAA_16   7 eeleqLlsalervrsgrpelvllsGesGvGKsslvrel 44 
                  e++ +l++l++ ++ + ++++++G + +GKss++++l
  KHJ35244.1 225 IEIRSILQTLNKSNTLTLPSIVVIGSQSSGKSSVLEAL 262
                 577777777776666666*****************987 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 1.2
      AAA_16  49 ekdggiflrgkcdqlesaipysalaqalareellrqlldeaesaeleawrekleeala...............a 107
                  +++ +f++ +++ le +   s+ +++l r++l++ l++   +++l+     ++++l+               +
  KHJ35244.1 469 ARNEHVFFSSHTQNLENNPGISVGTKTL-RRKLMQVLEQT-MASSLQTTENSIRQELEeaiyefkvqyndrplS 540
                 5555555555555553333333344444.54554444444.333444444444444443333454444333320 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   5.4e-05     0.081       2      24 ..     245     267 ..     244     315 .. 0.73

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 5.4e-05
      AAA_21   2 nvliGpNgsGKSnLLdaldllar 24 
                  v+iG  +sGKS++L+al +  +
  KHJ35244.1 245 IVVIGSQSSGKSSVLEALVGHEF 267
                 59****************76633 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00021      0.31       2      22 ..     245     265 ..     244     301 .. 0.89
   2 ?   -3.8   0.0       9.1   1.4e+04      24      60 ..     667     703 ..     659     709 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00021
      AAA_28   2 ivitGgestGKTtlleaLaar 22 
                 iv++G +s+GK+++leaL  +
  KHJ35244.1 245 IVVIGSQSSGKSSVLEALVGH 265
                 9*****************866 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 9.1
      AAA_28  24 ypvvpEaareileeklakgedalpwvedllafaervl 60 
                  +++ Eaa  il+e+  ++ d+ +   ++ +f+++v+
  KHJ35244.1 667 RQTIIEAASAILNERFYSTSDQVENCIKPFKFEIEVE 703
                 5788899999999998887777665545556666555 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.9   0.0      0.11   1.7e+02       4      26 ..     245     267 ..     243     290 .. 0.85
   2 ?    7.2   0.0    0.0027         4      91     110 ..     411     430 ..     359     448 .. 0.80

  Alignments for each domain:
  == domain 1  score: 1.9 bits;  conditional E-value: 0.11
   PduV-EutP   4 illiGkvgsGKttLtqalkgeel 26 
                 i++iG+  sGK ++ +al g+e+
  KHJ35244.1 245 IVVIGSQSSGKSSVLEALVGHEF 267
                 89***************999876 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0027
   PduV-EutP  91 eviGiitkidlaedeeniea 110
                  +iG+itk+dl++d  ++  
  KHJ35244.1 411 RTIGVITKMDLVDDARRVAL 430
                 68**********99988865 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00021      0.32       2      38 ..     245     281 ..     244     297 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00021
                 EEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEE CS
         Roc   2 vvlvGdsgvGKtsllkrfvedkfsekekstigvdflt 38 
                 +v++G +++GK+s l+ +v ++f +k +++i    ++
  KHJ35244.1 245 IVVIGSQSSGKSSVLEALVGHEFLPKGSNMITRRPIE 281
                 89*********************99988887665555 PP

>> SRI  SRI (Set2 Rpb1 interacting) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.1      0.21   3.1e+02       4      50 ..     515     570 ..     512     587 .. 0.79
   2 ?    9.4   0.3   0.00076       1.1      15      70 ..     688     744 ..     681     753 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.21
         SRI   4 qekkfkkelakvVvnvlnkYrkk.lk........kedfKklakeltkklvekElkk 50 
                 +e+  ++el + + ++  +Y ++ l+         + fK+  ke+t+   ++ +++
  KHJ35244.1 515 TENSIRQELEEAIYEFKVQYNDRpLSaesylaesLDMFKHSFKEFTQNFGRSQVRE 570
                 56777888888888888999999888899999988999999999999877777666 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 0.00076
         SRI  15 vVvnvlnkYrkklk.kedfKklakeltkklvekElkkdksrdppkelseekkkkike 70 
                  V n++++++ +++ +++   + ++   k++ kElk +++  ++ e s   ++k+k+
  KHJ35244.1 688 QVENCIKPFKFEIEvEDNEWIRGRDNMSKVLHKELKACEDAVKVVETSVGGRRKLKD 744
                 699*********99788888899***************9865555555555555444 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.1   0.00013       0.2      26      43 ..     245     262 ..     232     268 .. 0.88
   2 ?    0.3   2.7      0.29   4.4e+02     137     242 ..     463     576 ..     445     597 .. 0.56

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00013
      AAA_15  26 tvliGkNnsGKSsileal 43 
                  v+iG ++sGKSs+leal
  KHJ35244.1 245 IVVIGSQSSGKSSVLEAL 262
                 699**************9 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.29
      AAA_15 137 svekkkskkelpkekeeklek.ekeelkidkedlk.klikkleeslkkee......elknvlksaiiklllisakRnvsd.edsekkssllgklkekil 226
                 ++    +++e+  ++++ +++ +++ +++  ++l+ kl + le+ + + +      ++ + l++ai+++++  ++R  s  +   ++ +++   ++++ 
  KHJ35244.1 463 NIAASIARNEHVFFSSHTQNLeNNPGISVGTKTLRrKLMQVLEQTMAS-SlqttenSIRQELEEAIYEFKVQYNDRPLSAeSYLAESLDMFKHSFKEFT 560
                 333333344444444444443034566666444441333333333333.34777777888889999999999999998883344455666666666666 PP

      AAA_15 227 eealqekleeeltekl 242
                  + ++++ +e l+e+l
  KHJ35244.1 561 QNFGRSQVRELLKEEL 576
                 6666665533333333 PP

>> Vpu  Vpu protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   0.00023      0.35      25      61 ..     137     175 ..     134     178 .. 0.86
   2 ?   -2.9   0.3       4.1   6.2e+03      50      66 ..     198     214 ..     195     218 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00023
         Vpu  25 ivyreykkikkqkeierlikrireraed..SgnESdGee 61 
                 +  +++ + k+q e+ + ++r+  ++e+  SgnES+G  
  KHJ35244.1 137 FTQKRWENVKEQSELPEWMQRVLRIHEQilSGNESEGPG 175
                 56799****************999999777******965 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 4.1
         Vpu  50 aedSgnESdGeeeeela 66 
                  e+S++E + ee + l+
  KHJ35244.1 198 YEQSDDETNFEERDALD 214
                 599******99988775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (929 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       751  (0.0418874); expected 358.6 (0.02)
Passed bias filter:                      586  (0.0326845); expected 358.6 (0.02)
Passed Vit filter:                        72  (0.00401584); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 0.78u 0.28s 00:00:01.06 Elapsed: 00:00:00.45
# Mc/sec: 6259.34
//
Query:       KHJ35245.1  [L=955]
Description: putative rna-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.1e-59  193.5  17.0    9.5e-07   28.2   0.3    8.7  8  PUF           Pumilio-family RNA binding repeat
  ------ inclusion threshold ------
      0.028   14.5   0.5       0.18   12.0   0.6    2.3  2  Herpes_BLRF2  Herpesvirus BLRF2 protein
       0.31   10.8   2.9       0.23   11.2   0.1    2.1  2  DUF445        Protein of unknown function (DUF445)


Domain annotation for each model (and alignments):
>> PUF  Pumilio-family RNA binding repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   5.4e-10   3.2e-06       2      34 ..     603     635 ..     602     635 .. 0.90
   2 !   28.1   0.1   1.7e-10     1e-06       3      30 ..     640     667 ..     638     671 .. 0.87
   3 !   23.9   0.1   3.6e-09   2.1e-05       7      35 .]     680     709 ..     678     709 .. 0.89
   4 !   28.2   0.3   1.6e-10   9.5e-07       6      35 .]     716     745 ..     713     745 .. 0.95
   5 !   26.2   0.1   6.5e-10   3.9e-06       4      31 ..     750     777 ..     748     778 .. 0.93
   6 !   27.2   0.0   3.1e-10   1.9e-06       2      32 ..     784     814 ..     783     817 .. 0.87
   7 !   22.7   0.1   8.8e-09   5.2e-05       2      34 ..     820     852 ..     819     853 .. 0.88
   8 !   14.9   0.0   2.7e-06     0.016       9      34 ..     865     890 ..     860     891 .. 0.84

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 5.4e-10
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkkli 34 
                 ++g++ +L++dq+G++ +Qk le   + ++++i
  KHJ35245.1 603 LDGEIYTLCKDQHGCRYLQKKLEERNPDEIHRI 635
                 789********************9988888776 PP

  == domain 2  score: 28.1 bits;  conditional E-value: 1.7e-10
                 GGGHHHHHTSTTHHHHHHHHHHHSCHHH CS
         PUF   3 kgnlvqLstdqyGnyvvQkllehateeq 30 
                  +++++ +td++Gny++Qklle++  e+
  KHJ35245.1 640 NQHVIEFMTDPFGNYLCQKLLEYCNDEE 667
                 679********************77665 PP

  == domain 3  score: 23.9 bits;  conditional E-value: 3.6e-09
                 HHHHTSTTHHHHHHHHHHH.SCHHHHHHHH CS
         PUF   7 vqLstdqyGnyvvQklleh.ateeqkklil 35 
                 v ++ +q+G++++Qk++eh +t eq++ i+
  KHJ35245.1 680 VRIALNQHGTRALQKMIEHiTTQEQIDIII 709
                 56899**************99999999885 PP

  == domain 4  score: 28.2 bits;  conditional E-value: 1.6e-10
                 HHHHHTSTTHHHHHHHHHHHSCHHHHHHHH CS
         PUF   6 lvqLstdqyGnyvvQkllehateeqkklil 35 
                 +v+L++d +Gn+v+Qk+l ++ + + ++i+
  KHJ35245.1 716 VVELIQDLNGNHVIQKCLNKLNSQDAQFIF 745
                 89*************************997 PP

  == domain 5  score: 26.2 bits;  conditional E-value: 6.5e-10
                 GGHHHHHTSTTHHHHHHHHHHHSCHHHH CS
         PUF   4 gnlvqLstdqyGnyvvQkllehateeqk 31 
                 +++v+  t+++G++v+Q++++ha+ eqk
  KHJ35245.1 750 KHCVDVGTHRHGCCVLQRCIDHADGEQK 777
                 799*******************999986 PP

  == domain 6  score: 27.2 bits;  conditional E-value: 3.1e-10
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkk 32 
                 i++n  +L++d++GnyvvQ++l+ ++++ ++
  KHJ35245.1 784 ISNNAYTLVQDPFGNYVVQYILDLNEPVFTE 814
                 899********************88877766 PP

  == domain 7  score: 22.7 bits;  conditional E-value: 8.8e-09
                 HGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   2 ikgnlvqLstdqyGnyvvQkllehateeqkkli 34 
                 +kg++ qLs+ ++ ++v++k+l +a e+ k+++
  KHJ35245.1 820 LKGRVSQLSKQKFSSNVIEKCLRCAQEPTKDSL 852
                 799********************9888877766 PP

  == domain 8  score: 14.9 bits;  conditional E-value: 2.7e-06
                 HHTSTTHHHHHHHHHHHSCHHHHHHH CS
         PUF   9 LstdqyGnyvvQkllehateeqkkli 34 
                 +  d ++nyvvQ+ l++a++ +k ++
  KHJ35245.1 865 ILRDSFANYVVQTALDYASLDMKTRL 890
                 6679*************999887765 PP

>> Herpes_BLRF2  Herpesvirus BLRF2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.6   2.9e-05      0.18      39      94 ..     666     722 ..     661     738 .. 0.85
   2 ?   -2.5   0.0      0.92   5.5e+03      43      74 ..     727     758 ..     718     765 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.9e-05
  Herpes_BLRF2  39 aekeavltstvgrlsskaakkieer.vrkevlkvvtkneveevlknlslRidvsmad 94 
                   +e+ +++ ++   l + a ++   r ++k +++++t+++++ +++ l +R+   ++d
    KHJ35245.1 666 EERTVLIENASHDLVRIALNQHGTRaLQKMIEHITTQEQIDIIINALRYRVVELIQD 722
                   68999999999999999988876553899*********************9655655 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.92
  Herpes_BLRF2  43 avltstvgrlsskaakkieervrkevlkvvtk 74 
                    v+++  ++l s+ a+ i + v k+   v t+
    KHJ35245.1 727 HVIQKCLNKLNSQDAQFIFDAVGKHCVDVGTH 758
                   5789999********99999999998888775 PP

>> DUF445  Protein of unknown function (DUF445)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.4      0.49   2.9e+03     220     264 ..      73     117 ..      55     142 .. 0.61
   2 ?   11.2   0.1   3.8e-05      0.23      59     282 ..     620     874 ..     610     914 .. 0.68

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.49
      DUF445 220 dllndpelaakveklkkkklsdlevqeyeealwealkdlllkdln 264
                 + +n++e+++  + l kkkl+ ++ +e+++   ++++ l lk+ +
  KHJ35245.1  73 SQRNSQEMQDYGQSLEKKKLEYERLREQKRLYEAEMQLLDLKQRR 117
                 445666666666666666666666666655544444444333333 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 3.8e-05
      DUF445  59 lakkLkeaevasklaewlk.nptnkeslaaiveellkeiledlddesikellkknlkkkleevipepllgkllell....leeerhkkllddlldrikn 152
                 l+kkL+e ++++    wl+ n+ + e +++   + l ++l ++ +++ + +l +n++  l ++ +++   ++l+++    +++e+++ ++++l  r+ +
  KHJ35245.1 620 LQKKLEERNPDEIHRIWLEtNQHVIEFMTDPFGNYLCQKLLEYCNDEERTVLIENASHDLVRIALNQHGTRALQKMiehiTTQEQIDIIINALRYRVVE 718
                 899999999999999999977777777788888777777777777777777777777777777766655555555500005555555555555589999 PP

      DUF445 153 llkdeevkekikelidelieeesgklv....................lesivsmflre.ltsilekvksdpdhllreeedkkvreliadllndpelaak 230
                 l++d  ++  i++ +++l ++   +++                    l++  +    e    +++++ ++   l+++ + + v ++i dl + p + + 
  KHJ35245.1 719 LIQDLNGNHVIQKCLNKLNSQD-AQFIfdavgkhcvdvgthrhgccvLQRCIDHADGEqKAWLIRQISNNAYTLVQDPFGNYVVQYILDLNE-PVFTEP 815
                 9999999999999999995555.555569999999999998888888444444443330334567777777788888888888888888888.888888 PP

      DUF445 231 veklkkkklsdlevqeyeealwealkdlllkdlneee.......sllrerisklleklg 282
                 + +++k  +s+l +q+  +++ e+  ++ ++  +++         +l++++ + +++++
  KHJ35245.1 816 LVAMLKGRVSQLSKQKFSSNVIEKCLRCAQEPTKDSLieellqpNELDRILRDSFANYV 874
                 88888888888888888888555555555544444112222222355555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (955 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1136  (0.063361); expected 358.6 (0.02)
Passed bias filter:                      496  (0.0276647); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.76u 0.28s 00:00:01.04 Elapsed: 00:00:00.43
# Mc/sec: 6624.37
//
Query:       KHJ35246.1  [L=159]
Description: putative mitochondrial import inner membrane translocase subunit tim17 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-32  111.2   8.7    4.1e-32  110.9   8.7    1.1  1  Tim17     Tim17/Tim22/Tim23/Pmp24 family


Domain annotation for each model (and alignments):
>> Tim17  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.9   8.7   2.3e-36   4.1e-32       2     110 ..      13     119 ..      12     120 .. 0.96

  Alignments for each domain:
  == domain 1  score: 110.9 bits;  conditional E-value: 2.3e-36
       Tim17   2 vyktglsgvlGallGavfglvkgsrradtpapskerlreglrsvgkrgpslGknfgvvgglysgiecaleklRgkediwnsvaAGaltGall..ragpq 98 
                 ++++g+++ +Ga++Gav++ +kg+r+++    ++er+  ++ ++++r+p lG+nfgv+ggl+s+++ca++++R+ked++n+++AG++tG++l  r+g++
  KHJ35246.1  13 LNDFGGAFCMGAIGGAVWHGIKGFRNSP----YGERRTGAITAIKARAPVLGGNFGVWGGLFSTFDCAVKGIRKKEDPYNAIIAGFFTGGALaiRGGFK 107
                 6899**********************99....9**********************************************************9556**** PP

       Tim17  99 aaavgaiggaaf 110
                 aa ++aig+a++
  KHJ35246.1 108 AARNSAIGCACL 119
                 **********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       334  (0.018629); expected 358.6 (0.02)
Passed bias filter:                      282  (0.0157287); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.26s 00:00:00.67 Elapsed: 00:00:00.44
# Mc/sec: 1082.03
//
Query:       KHJ35247.1  [L=622]
Description: putative acetyl-coenzyme a transporter 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     2e-167  558.1  17.3    1.3e-86  291.3   6.2    3.1  3  Acatn       Acetyl-coenzyme A transporter 1
    0.00017   20.5   6.6    0.00078   18.4   6.4    2.0  2  MFS_1_like  MFS_1 like family


Domain annotation for each model (and alignments):
>> Acatn  Acetyl-coenzyme A transporter 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  291.3   6.2   1.4e-90   1.3e-86       2     226 ..     134     344 ..     133     347 .. 0.95
   2 !   99.3   0.0   2.2e-32   1.9e-28     258     341 ..     341     424 ..     338     430 .. 0.95
   3 !  177.9   0.8   3.4e-56     3e-52     375     548 .]     430     618 ..     424     618 .. 0.92

  Alignments for each domain:
  == domain 1  score: 291.3 bits;  conditional E-value: 1.4e-90
       Acatn   2 fylLvvLyllqGiPvGLafgtiPflLkslaketsftelgvfslatyPyslkilWsPivDslyskkiGrrrsWiiPvqlvsgilllvlglaiskglifeg 100
                 + lLv+Ly+lqGiP+GLa g++PflLk    ++s++ lgvfsla+yPyslk+lWsPivD+++s kiGrr+sWi+P+ql+sgi ++ lg+         +
  KHJ35247.1 134 VVLLVILYFLQGIPIGLATGSVPFLLKP---HMSYSALGVFSLASYPYSLKLLWSPIVDACWSPKIGRRKSWILPIQLLSGIGMIWLGT---------Q 220
                 579************************9...9*****************************************************9995.........5 PP

       Acatn 101 vddafhgeasekvlkvnilsLtlvflvLvllcatqDiavDgWaltiLskkslsyastaqtvGlnlGyflsftvflslnssdfvnkylrkvpleyglvsl 199
                 v d++  +++e+ + + i ++t+++++Lv++catqDiavDgWalt+L++ ++syastaqtvGl  G f+s+tvfl+++s df+n+++rk+p++ gl++l
  KHJ35247.1 221 VKDMM--RKAEEDNGAGIWEFTFWWFFLVFMCATQDIAVDGWALTLLTPGNISYASTAQTVGLTAGQFMSYTVFLAFESPDFANRWFRKQPSDEGLMTL 317
                 55666..3455667899********************************************************************************** PP

       Acatn 200 sgylklaGllyllvtlyvvfltkekpl 226
                 sgyl+++G++y++vt+ ++++ ke+ +
  KHJ35247.1 318 SGYLQFWGWIYIIVTIGLAIFRKEEKT 344
                 **********************99975 PP

  == domain 2  score: 99.3 bits;  conditional E-value: 2.2e-32
       Acatn 258 eeksektssiksvyrllikvlkLksvrllalihlisklafqcneaatnlkLLekGlkreDlavtvlidvPfeiifgyyvakwss 341
                 eek+++   i  vy++++ vlkLk++++++++hli+k++fq n++ tnlkL++kG+++eD+a+tvlid+Pfei +gyy  kws+
  KHJ35247.1 341 EEKTKNEDGIWDVYKVMWGVLKLKNIQTIIIVHLIAKIGFQANDSVTNLKLIDKGFSQEDMALTVLIDFPFEIGLGYYAGKWST 424
                 578899999*************************************************************************97 PP

  == domain 3  score: 177.9 bits;  conditional E-value: 3.4e-56
       Acatn 375 tPWlygflgrllaailgsyvvksfPkdgeitksyfllviiqhllgsflstvqfvgisafhtriaDpvlgGtymtllntlsnlGgtWprllvlslidyft 473
                 + W +gf+grl+aa++++++v+ fP+ + +  +y llvi  h+++ f +tv fv+isafh++iaDp++gGtymtll t+snlGgt+pr++vl l+d ft
  KHJ35247.1 430 RLWCWGFVGRLMAAVIAQIIVALFPS-NGVGIGYLLLVIAEHIFSTFTNTVMFVAISAFHAKIADPTIGGTYMTLLATVSNLGGTFPRFFVLKLVDLFT 527
                 45***********************7.5699******************************************************************** PP

       Acatn 474 iyecvledksketvllkna.................skelctkslggkvsivrDgyyvtnllCivlGillyftylkkkaqkLqklpisaWrv 548
                 +++cv    s++   +                     k+ c +   g++ + rDgyy+ n++C+++Gil + +++k  + +Lqklp+ aWrv
  KHJ35247.1 528 KATCVPAPLSSSPSFTLPDslrgpivtssfacsltaDKDRCIQ-GAGTCIVERDGYYIVNIMCVLIGILTFWGFIKTAVMRLQKLPLRAWRV 618
                 *****8887666544332247889999999**99988899999.7899******************************************97 PP

>> MFS_1_like  MFS_1 like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0     0.044   3.9e+02     312     327 ..     199     214 ..      35     256 .. 0.76
   2 !   18.4   6.4   8.7e-08   0.00078     187     358 ..     325     508 ..     288     514 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.044
  MFS_1_like 312 nawlvlpievLhgisf 327
                   +++lpi++L+gi +
  KHJ35247.1 199 RKSWILPIQLLSGIGM 214
                 4455555555555532 PP

  == domain 2  score: 18.4 bits;  conditional E-value: 8.7e-08
  MFS_1_like 187 aallvisllvvliln.etekesklkvtkslqvllnilknpeviifllvalilgmswgiienFlflYLkelgasntllGslvalgvvaeiplfffaekll 284
                   +++i+++ ++i+  e + ++++++  + +v++ +lk +++ ++++v li ++ + + ++  +l L ++g+s++ +  +v +    ei l ++a k+ 
  KHJ35247.1 325 GWIYIIVTIGLAIFRkEEKTKNEDGIWDVYKVMWGVLKLKNIQTIIIVHLIAKIGFQANDSVTNLKLIDKGFSQEDMALTVLIDFPFEIGLGYYAGKWS 423
                 445555555555554155667788999999********************************************************************* PP

  MFS_1_like 285 eklGhvklliiallayilrfllyaii..........enawlvlpie.vLhgisfgllwaaaveyvskiapksleatgqgllsgly 358
                  ++  ++l +++++   +  ++  ii          +   l++++e +++ ++  ++++a+  + +kia + + +t++ ll++++
  KHJ35247.1 424 TIYTPMRLWCWGFVGRLMAAVIAQIIvalfpsngvgIGYLLLVIAEhIFSTFTNTVMFVAISAFHAKIADPTIGGTYMTLLATVS 508
                 ********99998755554444444444448776675555666666267889999*************************99885 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (622 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       698  (0.0389313); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.40
# Mc/sec: 4670.63
//
Query:       KHJ35248.1  [L=1059]
Description: putative gram domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-39  134.2   0.0    1.1e-38  133.1   0.0    1.6  1  VASt      VAD1 Analog of StAR-related lipid transfer domain
    4.3e-23   81.4   0.0    9.3e-23   80.3   0.0    1.6  1  GRAM      GRAM domain


Domain annotation for each model (and alignments):
>> VASt  VAD1 Analog of StAR-related lipid transfer domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.1   0.0   1.2e-42   1.1e-38       3     154 .]     702     850 ..     700     850 .. 0.91

  Alignments for each domain:
  == domain 1  score: 133.1 bits;  conditional E-value: 1.2e-42
                 EEEEESS-HHHHHHHHHSS-THH.HHHHHHH.TT-BS-H.HHSE...........EEEEEEEE--SSSS-SEEEEEEEEE..EEEEETT.EEEEEEEEE CS
        VASt   3 veevlpisvkalfellfgdksef.lkkfleerqkttdisvgpweeake..kgkltRklsytkplkgsigpkqtkvtetqtilveeddly.yivvvtttk 97 
                 ++e +p +++++++l+fg++s++ +++f +  qk++d+++++   +k+   ++++R++sy+kpl g+igpkqtk++  +t  +e  d++ yi+v  +t+
  KHJ35248.1 702 ADELIPSPMGRVWNLIFGSGSQIwFRNFITVDQKCFDYTLEENA-KKPlaLDNKVRNYSYIKPLGGPIGPKQTKCICVET--LEFLDFEkYITVTISTQ 797
                 6778999**********99999889****999******876664.33357899***************************..99999999********* PP

                 -T.TSTTTTSEEEEEEEEEEEETTTE..E.EEEEEEEEEESS--TTHHHHHHHHHHH CS
        VASt  98 tpldvPygdsFsvetryvitwgsknskstcrltvstkvefsksswlkgiIekgalkg 154
                 tp dvP+g+ Fs++try++twg++ +  ++rl++s+ +e++++swlkg Iekga++g
  KHJ35248.1 798 TP-DVPSGNIFSIKTRYCFTWGPN-N--CTRLQISYMIEWTGKSWLKGPIEKGATDG 850
                 **.******************774.4..67************9***********987 PP

>> GRAM  GRAM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.3   0.0     1e-26   9.3e-23       1     110 [.     462     567 ..     462     571 .. 0.96

  Alignments for each domain:
  == domain 1  score: 80.3 bits;  conditional E-value: 1e-26
                 HHHHHHS----TT--EEEEEEEEEESS.SEEEEEEEEESSEEEEEE-STT---EEEEEGGGEEEEEE....-TT-TT-EEEEESS-..EEEEE--TTHH CS
        GRAM   1 elfrkkfkellpeEkllatykCyllrdggpvqGrlyltnyrlcFrskplgsskkvvlpladikriekstsaanllengiqvetsskdlelaFagfvtrd 99 
                 ++f++ f+++++++ l+++y+C+l+r+ ++++Grly+++ +lcF+s+++g+ +++v+ + +i+++ek +s+a  ++ng+ ++t +   +  Fa+f +rd
  KHJ35248.1 462 KDFHQLFRSVPDDDYLIEDYSCALQRE-ILAHGRLYVSEGHLCFSSNIFGWVTTLVMSFDEIVSVEK-RSTALVFKNGLMITTLHA--KNVFASFTSRD 556
                 589************************.***************************************.******************..89********* PP

                 HHHHHHHHHHH CS
        GRAM 100 eaiefieellk 110
                 +++++i   +k
  KHJ35248.1 557 STYDLIVGIWK 567
                 ****9987776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1059 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1213  (0.0676558); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.80u 0.30s 00:00:01.10 Elapsed: 00:00:00.46
# Mc/sec: 6914.06
//
Query:       KHJ35249.1  [L=314]
Description: putative cenp-o kinetochore centromere component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.4e-53  180.8   0.0      6e-53  180.0   0.0    1.3  1  CENP-O    Cenp-O kinetochore centromere component


Domain annotation for each model (and alignments):
>> CENP-O  Cenp-O kinetochore centromere component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.0   0.0   3.3e-57     6e-53       1     203 [.      95     289 ..      95     296 .. 0.91

  Alignments for each domain:
  == domain 1  score: 180.0 bits;  conditional E-value: 3.3e-57
      CENP-O   1 vTtFrvkDPdpnavdggnvLGiridvfsrgrflepYYvlLkrpseeeke.lrvhrHTvPafipLaklearylpap.eeeeeakkkkektrkqdLkkFvr 97 
                 +T Fr++DPdpnav++g++LG+r+dv+ +g+f++pYY++L++ ++ ek+ l+vhrHT+P++ipL+ l ++yl ++    + a+++k +t kq L  F r
  KHJ35249.1  95 ITPFRIQDPDPNAVNNGHILGLRFDVSNNGKFIRPYYIMLNKLWNGEKNmLSVHRHTLPPAIPLSTLVEKYLVNHrGPLALASGSKVRTGKQSLLIFSR 193
                 699******************************************99999**********************6655666788899999*********** PP

      CENP-O  98 elrreLvayhnRldavedLrealgleakkteeeeseereeelesrelkivslsaadleakqiriewadgrvgrlvisddGevekavvigesgkrdkele 196
                 +lrr +vayhnRl  ++  r a+gl+        +   ++     e+ i++lsa d e k++r+ew dgrvgr+vi++dGe++k+++i+e + r++ +e
  KHJ35249.1 194 ALRRSIVAYHNRLSLIKNFRIAFGLDV------DD---DSAMIYDEEIILDLSALDSEMKNLRLEWIDGRVGRIVINEDGEIKKCIIISEGK-RHRASE 282
                 *************************98......11...1234556779****************************************9988.****** PP

      CENP-O 197 eallggd 203
                 +al g+ 
  KHJ35249.1 283 RALSGSL 289
                 9998854 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (314 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       813  (0.0453455); expected 358.6 (0.02)
Passed bias filter:                      620  (0.0345808); expected 358.6 (0.02)
Passed Vit filter:                        58  (0.00323498); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 2357.11
//
Query:       KHJ35250.1  [L=352]
Description: putative replication factor c subunit 5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      7e-10   38.9   0.2    1.6e-09   37.7   0.2    1.6  1  DNA_pol3_delta2  DNA polymerase III, delta subunit
    7.2e-08   32.9   0.4    1.8e-07   31.6   0.4    1.7  1  AAA              ATPase family associated with various cellul
    1.6e-05   25.2   0.7    9.3e-05   22.7   0.3    2.3  2  AAA_22           AAA domain
    9.9e-05   22.8   0.9     0.0054   17.1   0.4    2.8  2  AAA_16           AAA ATPase domain
    0.00019   21.4   0.0    0.00037   20.5   0.0    1.4  1  Rad17            Rad17 P-loop domain
     0.0017   18.1   0.8      0.006   16.3   0.8    1.8  1  AAA_24           AAA domain
     0.0053   17.1   0.3      0.012   15.9   0.0    1.8  2  Rep_fac_C        Replication factor C C-terminal domain
  ------ inclusion threshold ------
      0.014   15.9   0.0      0.027   14.9   0.0    1.4  1  SCIMP            SCIMP protein
      0.036   13.3   0.1      0.057   12.6   0.1    1.3  1  DUF2075          Uncharacterized conserved protein (DUF2075)
       0.05   12.8   0.1       0.13   11.4   0.0    1.7  2  DUF815           Protein of unknown function (DUF815)
      0.051   13.3   0.4       0.11   12.3   0.4    1.5  1  DNA_pol3_delta   DNA polymerase III, delta subunit


Domain annotation for each model (and alignments):
>> DNA_pol3_delta2  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.7   0.2     1e-12   1.6e-09      13     159 ..      30     184 ..      19     188 .. 0.69

  Alignments for each domain:
  == domain 1  score: 37.7 bits;  conditional E-value: 1e-12
  DNA_pol3_delta2  13 lksgrlahayLfeGdegigkkelalnlakallceeknetk...pcgecksckkieqgkhpDvivi.....eteekersikldqirelieelsr. 97 
                      ++s ++ h +L++G++g+gkk+   +  k+l  +  ++ k         s +k+e + ++ v ++     +  + +r++  d ++e+ ++ +  
       KHJ35250.1  30 AQSSEFPH-LLVYGPSGAGKKTRVVATLKELYGSGVEKIKidsRVFVTTSNRKLEFNIVSSVYHLeitpsDVGNYDRVVIQDLLKEVAQTQQVd 122
                      55555555.6788888888888888888888877666655333222333444444444444444444443334444466667777766655541 PP

  DNA_pol3_delta2  98 kpreskkkiiiiedaekmtksAaNalLktlEEPsenaifiLitsdtnklLktirSRcqelkf 159
                      +  + k k++ii++a+++t+ A+ al +t+E    n  +iL++++  +++ +irSR+  +++
       KHJ35250.1 123 QNAKQKFKVVIINEADHLTRDAQAALRRTMEKYTPNLRLILVANSMANIIAPIRSRTLLVRV 184
                      4556889**************************************************98876 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.4   1.1e-10   1.8e-07       1     124 [.      38     179 ..      38     185 .. 0.75

  Alignments for each domain:
  == domain 1  score: 31.6 bits;  conditional E-value: 1.1e-10
                 EEEESSTTSSHHHHHHHHHHHH...THEEEEEETTTCSSS.............................STTHHHHHHHHHHHHHHHTS..TSEEEEEE CS
         AAA   1 vllyGppGtGKTllakavakel...gvefleisgsellsk.............................yvgesekkirelfkeakeka..kpsilfiD 65 
                 +l+yGp G GK + + a  kel   gve ++i+   ++                               ++++  k+++++ +   ++a  k ++++i 
  KHJ35250.1  38 LLVYGPSGAGKKTRVVATLKELygsGVEKIKIDSRVFVTTsnrklefnivssvyhleitpsdvgnydrvVIQDLLKEVAQTQQV-DQNAkqKFKVVIIN 135
                 69*******************865546655555555553345666666788888888888888888887444444444444433.33334334****** PP

                 TGGGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTSSSTEEEEEEESSGGGSTHHHHSTTS CS
         AAA  66 EidalaksrsgseseeeervvnqLlteldgvkkkeskvivigatnrpdkldpallrgRf 124
                 E+d l+++            +++L + +++++    ++ +i+++n++ ++  +++ +R 
  KHJ35250.1 136 EADHLTRDA-----------QAALRRTMEKYTP---NLRLILVANSMANIIAPIR-SRT 179
                 *****9888...........*************...69*****************.775 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.3   5.7e-08   9.3e-05       7     128 ..      37     164 ..      33     170 .. 0.73
   2 ?   -0.6   0.0      0.89   1.5e+03      51      88 ..     249     284 ..     194     292 .. 0.68

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 5.7e-08
      AAA_22   7 ilvvtGesGtGK.Ttllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka.................erlsseellealeqalr 87 
                 +l+v+G+sG+GK T+++++l+e +         +++v ++++ s    ++  r+l  ++ ++  +                   l++ +  +++ q+++
  KHJ35250.1  37 HLLVYGPSGAGKkTRVVATLKELY---------GSGVEKIKIDSRVFVTTSNRKLEFNIVSSVYHleitpsdvgnydrvviqDLLKEVAQTQQVDQNAK 126
                 799********55**********9.........566665555555555555555555555555555556777778888888666666666688888888 PP

      AAA_22  88 aravielliiDEaqhlrseealeeLrsllnlsrkgvqliLv 128
                 ++++  ++ii Ea+hl + +a   Lr+ ++  + +++liLv
  KHJ35250.1 127 QKFK--VVIINEADHL-TRDAQAALRRTMEKYTPNLRLILV 164
                 8888..**********.988888888887755666666666 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.89
      AAA_22  51 tsskdllrellralglelkaerlsseellealeqalra 88 
                  +++ l +e+++++++e++   ++   ++++l++ l +
  KHJ35250.1 249 PDWEALITEVANEINDEHSP--ARILLVRAKLYDLLTH 284
                 35677777777777766666..5555555666665555 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.4   3.3e-06    0.0054      13      63 ..      23      82 ..      20     164 .. 0.53
   2 ?    2.8   0.0     0.085   1.4e+02      40      99 ..     254     316 ..     214     345 .. 0.77

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 3.3e-06
      AAA_16 13 lsalervrsgrp.elvllsGesGvGK.sslvrellralekd........ggiflrgkcdql 63
                +  l++++++++ + +l++G+sG GK +++v +l++ l ++          +f+++ +++l
  KHJ35250.1 23 TKRLRALAQSSEfPHLLVYGPSGAGKkTRVVATLKE-LYGSgvekikidSRVFVTTSNRKL 82
                5566766666667************64999999995.555534444443234444444443 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.085
      AAA_16  40 lvrellralekd....ggiflrgkcdql.esaipysalaqalareellrqlldeaesaeleawre 99 
                 l++e++++++++    +++++r+k  +l +  ip  +++++l++  l+  ++d++++ ++  w++
  KHJ35250.1 254 LITEVANEINDEhspaRILLVRAKLYDLlTHCIPATTIIKTLTF-NLIPLVHDDLKA-DVIKWAA 316
                 55555555555555447777888888885555777778888855.888888888666.6666655 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   2.3e-07   0.00037      10     159 ..       5     155 ..       2     176 .. 0.69

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 2.3e-07
       Rad17  10 fekykPekaeelavhkkkieevkewlkadvLesrkkriLLisGPsGCgkstvvkvLskel.giklre.wlnpvslkepdnqksdfkgltekesrf..ls 104
                 ++k+ P  +e+l  h    + ++   +++  +      LL+ GPsG gk t v    kel g  +++  +++  +  ++n+k +f  +  +       s
  KHJ35250.1   5 VDKHHPRSLEQLTYHFDLTKRLRALAQSSEFP-----HLLVYGPSGAGKKTRVVATLKELyGSGVEKiKIDSRVFVTTSNRKLEFNIVSSVYHLEitPS 98 
                 79999999999999987666665443333333.....58*********9997766666651555544247888999******99987666654224478 PP

       Rad17 105 qiesfkeleLkdakylk..lqklGddlrtdkklilvedlPnkfyrds.dalrevirky 159
                  +  +  + ++d    +   q+  ++++ + k++++++   +  rd+  alr  + ky
  KHJ35250.1  99 DVGNYDRVVIQDLLKEVaqTQQVDQNAKQKFKVVIINEAD-HLTRDAqAALRRTMEKY 155
                 9999999999887655511566778899999999999964.45555536777766666 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.8   3.7e-06     0.006       5      91 ..      38     154 ..      35     159 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 3.7e-06
      AAA_24   5 iliyGpsgiGK.TtlakelgpkplfidtekGlksldadkfpdie............................swedfldevvel....aaeladyktlv 70 
                 +l+yGpsg+GK T ++++l ++     +ek   ++d + f++ +                             ++d+l+ev++     + +++++k+++
  KHJ35250.1  38 LLVYGPSGAGKkTRVVATL-KELYGSGVEK--IKIDSRVFVTTSnrklefnivssvyhleitpsdvgnydrvVIQDLLKEVAQTqqvdQNAKQKFKVVI 133
                 79********648899999.5555555555..3444444444445555566666666888888888889999999999999999999999999****** PP

      AAA_24  71 iDtideleelclaevirqnek 91 
                 i  +d+l + + a ++r  ek
  KHJ35250.1 134 INEADHLTRDAQAALRRTMEK 154
                 ************999887776 PP

>> Rep_fac_C  Replication factor C C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.1         7   1.1e+04      40      62 ..     112     132 ..     106     139 .. 0.38
   2 !   15.9   0.0   7.7e-06     0.012       2      88 .]     251     338 ..     250     338 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 7
                 HHHHHHHGCCS..S-HHHHHHHH CS
   Rep_fac_C  40 ltqlhrvvkeqeelpeaqkleil 62 
                 l+++ +      + +++qk +++
  KHJ35250.1 112 LKEVAQTQQV--DQNAKQKFKVV 132
                 3333333211..12334444444 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 7.7e-06
                 -HHHHHHHHHHHHH.....T-HHHHHHHHHHHHHHC---HHHHHHHHHHHGCCS..S-HHHHHHHHHHHHHHHHHHHCTH-HHHHHHHHHHH CS
   Rep_fac_C   2 hpteieeileacln.....gdfeeaykklrellvekGysaediltqlhrvvkeqeelpeaqkleilellgeiekrlveGasehlqlsallar 88 
                 ++++i+e+++ + n     +++  +++kl  +l  + ++a+ i+++l   ++    + +++k+++++ ++++e+r+  G+    +l+a++a+
  KHJ35250.1 251 WEALITEVANEI-NdehspARILLVRAKLY-DLLTHCIPATTIIKTLTFNLIPL--VHDDLKADVIKWAAFYEHRIRMGTKVIFHLEAFVAK 338
                 688899999999.54777777777888897.88888***********8888864..89********99**********************96 PP

>> SCIMP  SCIMP protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   1.7e-05     0.027      33      95 ..     205     269 ..     202     287 .. 0.83

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.7e-05
       SCIMP  33 rllrqGkkweiakslkqkerdeekmyenvl..nqspvqlPplPPrgllssedsspqetksqppat 95 
                 ++l++G + +iak  k++ r    mye v   n++ ++  p+PP ++    ++  +e++ +++++
  KHJ35250.1 205 WQLHKGLNERIAKESKRNLRRALLMYEAVHaqNEKVDDKTPIPPPDWEALITEVANEINDEHSPA 269
                 89**************************972256678899*****99999888888887776554 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   3.5e-05     0.057       4     109 ..      38     149 ..      36     171 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 3.5e-05
     DUF2075   4 vlVtGvaGtGKtvvllnllael.....eddeeertavylsvNhplvlvlrealakkeekkkkkeafeklssfinnlsef...kkaeekkeepkedvviv 94 
                 +lV G +G+GK    ++ l el     e+ + ++++ + + N++l   + + + ++  + + +++ ++ + +i++l +     ++ ++++++k++vvi+
  KHJ35250.1  38 LLVYGPSGAGKKTRVVATLKELygsgvEKIKIDSRVFVTTSNRKLEFNIVSSV-YHL-EITPSDVGNYDRVVIQDLLKEvaqTQQVDQNAKQKFKVVII 134
                 689********999999999999999544444544444555555544444444.233.3455555566666777777556766788999********** PP

     DUF2075  95 DEAhrlltksdqaek 109
                  EA  l+  +++a +
  KHJ35250.1 135 NEADHLTRDAQAALR 149
                 ***999885555443 PP

>> DUF815  Protein of unknown function (DUF815)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   7.9e-05      0.13      40      89 ..      22      71 ..       7      81 .. 0.89
   2 ?   -3.4   0.1       2.5   4.2e+03      21      46 ..     102     127 ..      97     134 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 7.9e-05
      DUF815 40 lventeqfleglpannvLLwGarGtGKSslvkallneyaeegLrlievek 89
                l++  +++++  +  ++L++G  G+GK + v a+l+e+  +g+  i+++ 
  KHJ35250.1 22 LTKRLRALAQSSEFPHLLVYGPSGAGKKTRVVATLKELYGSGVEKIKIDS 71
                677788889999999***************************99999986 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.5
      DUF815  21 evdevklddLvgidkqkealventeq 46 
                 ++d+v ++dL    +q +++ +n++q
  KHJ35250.1 102 NYDRVVIQDLLKEVAQTQQVDQNAKQ 127
                 66777778887777888888888776 PP

>> DNA_pol3_delta  DNA polymerase III, delta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   6.6e-05      0.11      59     164 ..     130     225 ..     110     228 .. 0.93

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 6.6e-05
                     EEEEEE--.....TT-S-TTHHHHHHHHTTT--SSEEEEEEES.S--HHHHHHHHHTTTEEEEEE----TTTHHHHHHHHHHHTT-EE-HHHHHH CS
  DNA_pol3_delta  59 rivvlknpklltkesklnekllkeLeeylsnlpedtlLiliapkklderkklvklLkkkatvveaktlkeeelkkwiqkraqelglkiekealel 153
                     ++v+++ +      + l+ + +++L ++++++ ++  Lil+a+    +  +++  + +++ +v++  ++eee+   +++  +++g ++ k   e 
      KHJ35250.1 130 KVVIINEA------DHLTRDAQAALRRTMEKYTPNLRLILVAN----SMANIIAPIRSRTLLVRVAAPTEEEICMVLERSGKREGWQLHKGLNER 214
                     67777777......6799999**********************....67799******************************************* PP

                     HHHHHTT-HHH CS
  DNA_pol3_delta 154 Llelvennlsa 164
                     +++ +  nl++
      KHJ35250.1 215 IAKESKRNLRR 225
                     *****999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (352 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       799  (0.0445647); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 2637.01
//
Query:       KHJ35251.1  [L=238]
Description: putative ribosome biogenesis protein nhp2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.9e-22   76.5   0.5    3.6e-21   74.7   0.5    2.0  1  Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 famil


Domain annotation for each model (and alignments):
>> Ribosomal_L7Ae  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.7   0.5     2e-25   3.6e-21       2      88 ..     107     201 ..     106     209 .. 0.91

  Alignments for each domain:
  == domain 1  score: 74.7 bits;  conditional E-value: 2e-25
                     HHHHHHHHHHHHTEEEESHHHHHHHHHTT........TESEEEEETTSSSGGHHHHHHHHHHHTTEEEEEESCHHHHHHHTTSSSECSEEEEEES CS
  Ribosomal_L7Ae   2 aieevlkkakkagklvlGlkevtkalerg........eaklvilAedvepeekkkllealckekevpyvkvkskkeLGelvgkkrpvsalaikde 88 
                     ++ + +kka+k ++l++G+kev+kal++            +v+lA+d++p +  +++++lc+e++vpy++vks++eLG + + krp+s++++ + 
      KHJ35251.1 107 KVLKSVKKASKVKTLKRGVKEVVKALRKSpqgvgntsAPGVVVLAADISPMDVISHIPVLCEEHNVPYIFVKSRAELGSAGNTKRPTSVVMVSET 201
                     788999*********************98777777767899*********************************************999998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (238 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1834  (0.102292); expected 358.6 (0.02)
Passed bias filter:                      683  (0.0380947); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 1750.07
//
Query:       KHJ35252.1  [L=220]
Description: hypothetical protein EV44_g3247 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.094   12.4   1.4       0.18   11.6   1.4    1.4  1  zf-CCHC_5  GAG-polyprotein viral zinc-finger


Domain annotation for each model (and alignments):
>> zf-CCHC_5  GAG-polyprotein viral zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   1.4   9.9e-06      0.18       3      19 ..     179     195 ..     177     198 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 9.9e-06
                 -B-TTT-SSBS-TTT-- CS
   zf-CCHC_5   3 glCpRCkkgkHwardCh 19 
                 +lC RC+k  H a  C+
  KHJ35252.1 179 NLCMRCGKFGHKAIHCR 195
                 8************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (220 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       365  (0.0203581); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1635.06
//
Query:       KHJ35253.1  [L=532]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1124  (0.0626917); expected 358.6 (0.02)
Passed bias filter:                      536  (0.0298957); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 3919.27
//
Query:       KHJ35254.1  [L=343]
Description: putative malate dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.5e-45  153.1   0.0    1.2e-44  152.2   0.0    1.4  1  Ldh_1_C         lactate/malate dehydrogenase, alpha/beta C-te
    1.4e-42  145.2   0.1    2.1e-42  144.6   0.1    1.3  1  Ldh_1_N         lactate/malate dehydrogenase, NAD binding dom
     0.0016   17.5   0.0     0.0023   17.0   0.0    1.2  1  3Beta_HSD       3-beta hydroxysteroid dehydrogenase/isomerase
  ------ inclusion threshold ------
       0.11   13.0   0.1        0.3   11.5   0.1    1.8  2  Semialdhyde_dh  Semialdehyde dehydrogenase, NAD binding domai


Domain annotation for each model (and alignments):
>> Ldh_1_C  lactate/malate dehydrogenase, alpha/beta C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  152.2   0.0   2.7e-48   1.2e-44       1     167 []     173     337 ..     173     337 .. 0.95

  Alignments for each domain:
  == domain 1  score: 152.2 bits;  conditional E-value: 2.7e-48
                 THHHHHHHHHHHHHHHTS-GGGEE--EEBSSSTETTEEHHHHHTTSTTSTHHHHHHHHHHHHHHHHHHHHHHTTSSSS-HHHHHHHHHHHHHHHTTHTE CS
     Ldh_1_C   1 TtLDivRaktflaekagvtprsvkvtViGgHsgvtiipllsqvkellklsekqleeliervqnggdevvkakkGagsatlsmAvAgakfveallrdtke 99 
                 TtLD+vRa+ f++e ++++p+++k+tV+GgHsgvti+pl+sq+ + + +++k   +l ervq+ggdevvkak+G gsatlsmA+Aga+f+++llr++++
  KHJ35254.1 173 TTLDVVRASRFVSEIKNTDPDKEKITVVGGHSGVTIVPLFSQSSHPDLVNDK---KLLERVQFGGDEVVKAKDGSGSATLSMAMAGARFTDSLLRAIEG 268
                 9********************************************8888875...799***************************************** PP

                 EEEEEEEEESCCCECCS...SEEEEEEEEEEETTEEEEE-------HHHHHHHHHHHHHHHHHHHHHHCCH CS
     Ldh_1_C 100 ilsagvyldgevglkdq...eieyfsvPvvlgknGvekvleilklndfeeekleksvkeLkkeiekglefv 167
                 +  +g++++++v+++     +i++fs+ v lg nGv+k++e+++l ++e+  l+++   L k+i+kg++fv
  KHJ35254.1 269 E--KGIVEPAYVDSPLYkdsGIDFFSSRVELGPNGVNKIHEVGNLAPEEQGLLKAALVDLLKNIDKGIKFV 337
                 *..********998654445************************************************996 PP

>> Ldh_1_N  lactate/malate dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.6   0.1   4.7e-46   2.1e-42       2     141 .]      28     171 ..      27     171 .. 0.97

  Alignments for each domain:
  == domain 1  score: 144.6 bits;  conditional E-value: 4.7e-46
                 EEEEETTTSHHHHHHHHHHHHTTSSSEEEEE-SSHHHHHHHHHHHHHCHCCSTS-EEEEE..SSGGGGTTESEEEE--S-SS-TTTTHHHHHHHHHHHH CS
     Ldh_1_N   2 kvavvGaaGgiGqslalllankkladelaLlDiakekleGvaldlshistflsvkvkvse..keeealkdadvvvitagvprkpGetRddLlkvNakIv 98 
                 kvav+GaaGgiGq+l+lll+ ++ + +laL+Di+   ++Gva+dl hi+t ++v ++ ++  +  +al+++++v+i+agvprkpG++RddL+++Na+Iv
  KHJ35254.1  28 KVAVLGAAGGIGQPLSLLLKLNPRVTDLALYDIR--LAHGVATDLAHINTKSTVAGYGPSedGLAKALSGSEIVLIPAGVPRKPGMSRDDLFNTNASIV 124
                 9*********************88889*******..9******************9988767899********************************** PP

                 HHHHHHHHHHTTTSEEEE-SSSHH....HHHHHHHHHHTS-GGGEEE CS
     Ldh_1_N  99 keiveaiakvapnaivlvvsNPvd....iltevlkkasglpkkrvig 141
                 +++++ai+ +ap+a vlv+sNPv+    i++ev+kk+ ++++k+++g
  KHJ35254.1 125 RDLAKAISISAPKANVLVISNPVNstvpIVAEVFKKNKTYNPKNLFG 171
                 *******************************************9997 PP

>> 3Beta_HSD  3-beta hydroxysteroid dehydrogenase/isomerase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.0   5.2e-07    0.0023       1      88 [.      30     116 ..      30     144 .. 0.89

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 5.2e-07
   3Beta_HSD   1 vvtGgaGFlGralvkeLvrlee.lkevrvlDlrespelleelskvnvkkviegDvtdkdkleealegvdvvihlaslvdvagkltedei 88 
                 +v+G+aG +G+ l + L++l++ + ++  +D+r  + +  +l ++n+k+++ g   ++d l +al g+++v+  a++    g+ ++d +
  KHJ35254.1  30 AVLGAAGGIGQPL-SLLLKLNPrVTDLALYDIRLAHGVATDLAHINTKSTVAGYGPSEDGLAKALSGSEIVLIPAGVPRKPGMSRDD-L 116
                 59*********98.567777776***************************************************9999988876666.4 PP

>> Semialdhyde_dh  Semialdehyde dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.1   6.6e-05       0.3       1      40 [.      28      67 ..      28     104 .. 0.84
   2 ?   -3.3   0.0       2.6   1.2e+04       2      23 ..     197     218 ..     196     224 .. 0.67

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 6.6e-05
                    EEEEETTTSHHHHHHHHHHHCTSSEEEEEEEESTTTTTSB CS
  Semialdhyde_dh  1 kvaivGatGyvGqellrlLeehpevelvvllsssrsaGkk 40
                    kva++Ga G +Gq l  lL+ +p v+ ++l+  +  +G +
      KHJ35254.1 28 KVAVLGAAGGIGQPLSLLLKLNPRVTDLALYDIRLAHGVA 67
                    7************************999999887766655 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 2.6
                     EEEETTTSHHHHHHHHHHHC..TS CS
  Semialdhyde_dh   2 vaivGatGyvGqellrlLee..hp 23 
                     + +vG  G  G  ++ l ++  hp
      KHJ35254.1 197 ITVVG--GHSGVTIVPLFSQssHP 218
                     67777..77777777777774444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (343 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       261  (0.0145574); expected 358.6 (0.02)
Passed bias filter:                      242  (0.0134977); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2553.75
//
Query:       KHJ35255.1  [L=281]
Description: hypothetical protein EV44_g1619 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (281 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       398  (0.0221987); expected 358.6 (0.02)
Passed bias filter:                      354  (0.0197445); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2048.44
//
Query:       KHJ35256.1  [L=339]
Description: putative tkp3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-09   38.0   0.0    2.8e-09   37.2   0.0    1.4  1  rve       Integrase core domain
     0.0041   17.2   0.4      0.083   13.0   0.1    2.8  2  MLVIN_C   Murine leukemia virus (MLV) integrase (IN) C-termin


Domain annotation for each model (and alignments):
>> rve  Integrase core domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.2   0.0   3.1e-13   2.8e-09      20     116 ..      41     134 ..      25     136 .. 0.88

  Alignments for each domain:
  == domain 1  score: 37.2 bits;  conditional E-value: 3.1e-13
         rve  20 gggkayllvvvddfsrlilaealsdemdastvlalleravarfggvepervlsDngseytskafrefladlgirvsftrpgrpqdnGkvErfhrtlk 116
                 + g++ ++  ++   + +  +++ +  + ++++ ll   +  fg   p+ ++sDn+ ++t  + r+f +++  + ++t p+rpq nGkv +++++lk
  KHJ35256.1  41 WAGTVDVILTILLKHNALESWIVQST-NFEDTIPLLLFIIYTFGA--PKQIISDNAICFTGVEARRFQQSNSLKFTHTTPARPQGNGKVKQANGILK 134
                 44467777788888889999999999.**********88888888..***********************************************998 PP

>> MLVIN_C  Murine leukemia virus (MLV) integrase (IN) C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0     0.056   5.1e+02      16      49 ..      35      64 ..      29      70 .. 0.77
   2 !   13.0   0.1   9.2e-06     0.083       3      30 ..     242     269 ..     240     274 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.056
                -SSSS--EEEEEEEEEEEETTEEEETTSSS-EEG CS
     MLVIN_C 16 rqkkLePrWkgpyvvllttptalkvdgiaswvha 49
                +q++L   W g   v+lt    lk + + sw+ +
  KHJ35256.1 35 KQNSL--DWAGTVDVILTI--LLKHNALESWIVQ 64
                44555..599999999996..6899999999865 PP

  == domain 2  score: 13.0 bits;  conditional E-value: 9.2e-06
                 XXXTTEEEEEEE--SSSS--EEEEEEEE CS
     MLVIN_C   3 kyrpGdwvyvrrhrqkkLePrWkgpyvv 30 
                 ++ pGdwv+  r+r++k eP ++gp+ +
  KHJ35256.1 242 TFAPGDWVLRVRQRRHKFEPYYDGPWAI 269
                 699******99**************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (339 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       653  (0.0364214); expected 358.6 (0.02)
Passed bias filter:                      568  (0.0316805); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2579.26
//
Query:       KHJ35257.1  [L=476]
Description: putative duf89 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   9.6e-127  422.8   1.1   1.1e-126  422.6   1.1    1.0  1  DUF89     Protein of unknown function DUF89


Domain annotation for each model (and alignments):
>> DUF89  Protein of unknown function DUF89
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  422.6   1.1  6.1e-131  1.1e-126       1     353 []      22     445 ..      22     445 .. 0.98

  Alignments for each domain:
  == domain 1  score: 422.6 bits;  conditional E-value: 6.1e-131
                 HHHTHHHHHHHHHHHHHHHHTCC.....HHHHHHHHHHHHHHHHHHHHCTTCGHHH-HHHH..............T-BTTBSBHHHHHHHHHHHHHHHH CS
       DUF89   1 tleerlpciltqviddlekakde.....keeelkkiieelselkeelqtdkpltpledeee..............krswfnapwlfaecylyrrllelf 80 
                 t+++r+p+ilt++idd++ka +e     k+ee+kki +el++lk+elq+d+ lt+l d+++              +++w+n+pwlf+ecylyrr+ ++f
  KHJ35257.1  22 TARDRWPVILTGAIDDIHKAVSEttdeqKREEGKKITAELAKLKYELQHDRILTELSDDGQpdiavynrelnaigNPTWLNCPWLFSECYLYRRIATYF 120
                 789****************5555555679********************************************************************** PP

                 THSGGGTTS-TTHHHHHHHHHHHHHHHHHHHHHHHHCCSH................HHHHHHHHHHHHHHCG--CCCHT..SHHCHHHHHHHHHHHHHH CS
       DUF89  81 glskelknyDpFkeqKeesnksalkaveelakrleelede................kelfkellkislwGNaiDlslla..teediqkdqeeearkale 161
                  ls+++knyD+F++ K+++++s++ av ela r++el ++                k +f+e++ki+lwGNa+Dlslla  + +diqk+q+ +a k+++
  KHJ35257.1 121 TLSQYWKNYDVFADKKTSTFRSSRFAVIELAYRYQELVSQiqnkspksqmetdaieKAMFMEVCKICLWGNATDLSLLAgsSFDDIQKLQGIDANKSSD 219
                 ********************************************************************************99***************** PP

                 CTESEE-HHHHHHHH.....CTCHTSEEEEE--BTTHHHHHHHHHHHHHHHCTTTSEEEEEEBSS--TTTB-BHHHHHHHHHHHH-TTTS......... CS
       DUF89 162 knilvddleklwekl.....kkkkakrvdivlDNaGfElvfDlllaeeLlesglatkVvlhvkaiPwfvsDvtpeDfewlleqladsksf......... 246
                 +++l++d++ ++e+l     +kk+ +++divlDNaGfEl++Dl+la ++l++glat+++lh k+iPwfvsDv+p+Df+ ll++la+++sf         
  KHJ35257.1 220 SRMLINDINLAYEVLkeakkTKKSVRQIDIVLDNAGFELYVDLILAGFILSTGLATNIILHSKSIPWFVSDVVPQDFQVLLNALANPQSFfsnpndket 318
                 ******************9999999************************************************************************** PP

                 ...............HHHHCHTTHHHHHHTSEEEEESSCGGSSS--CCGSS.SHHHHHHHHHC-SEEEEEHHHHHHHHTTSCTTTTTSEHHHHT....G CS
       DUF89 247 ...............elsalgagldellkegklvlrgssfwttglsysemp.eapelyeelekadLvifKGdlNyrkLtgdrkwppttpfttal....g 325
                                +l++++ +++++++eg+l+lr+++fwt   s++++p +ap+l+++l+ ++LvifKGdlNyrkLtgd+kw++tt+ft+al    +
  KHJ35257.1 319 idskaseplapkeidALNFVFREWSKFHTEGQLLLRADRFWTETGSFWRLPtRAPQLFSDLKASELVIFKGDLNYRKLTGDAKWDTTTSFTKALgplgE 417
                 *************************************************************************************************** PP

                 TSS--EEEEEE--SHHHHHHHSTTTHEE CS
       DUF89 326 fspvpvlaLrtvKadvvagllegegekl 353
                 +s++++l+Lrt+K+dv++gl +ge+e+l
  KHJ35257.1 418 QSGINILSLRTCKSDVIVGLKQGEDENL 445
                 ***********************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (476 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       765  (0.0426683); expected 358.6 (0.02)
Passed bias filter:                      575  (0.0320709); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.28s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3382.27
//
Query:       KHJ35258.1  [L=260]
Description: putative sh3 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-10   40.0   0.1    3.7e-10   39.2   0.1    1.4  1  SH3_1     SH3 domain
    3.2e-10   39.7   0.3    4.8e-10   39.1   0.3    1.3  1  SH3_9     Variant SH3 domain
    6.7e-07   28.9   0.0    1.1e-06   28.2   0.0    1.3  1  SH3_2     Variant SH3 domain


Domain annotation for each model (and alignments):
>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.2   0.1   6.2e-14   3.7e-10       9      47 ..     120     158 ..     114     159 .. 0.91

  Alignments for each domain:
  == domain 1  score: 39.2 bits;  conditional E-value: 6.2e-14
                 SSTTBXEBSTTEEEEEEEECSSSEEEEEETTSTEEEEEE CS
       SH3_1   9 eesdELsfkkGDviivleksedgWwkgrlkgtgkeGliP 47 
                  e+++++f+ GD+iiv e  + +Ww g++ +tg+eG +P
  KHJ35258.1 120 AEAGDCNFEVGDTIIVYEYMNQDWWLGKNLRTGQEGVFP 158
                 47899********************************** PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1   0.3   8.1e-14   4.8e-10       1      49 []     115     163 ..     115     163 .. 0.91

  Alignments for each domain:
  == domain 1  score: 39.1 bits;  conditional E-value: 8.1e-14
       SH3_9   1 AlypyepreddeLsLqrGDvitvieesedgWlegsl..tGrtGlvPanyve 49 
                 Aly+y+  e+    +++GD+i+v e  + +W++g++  tG+ G++P+nyv+
  KHJ35258.1 115 ALYRYA--EAGDCNFEVGDTIIVYEYMNQDWWLGKNlrTGQEGVFPQNYVQ 163
                 788888..777789**********999********668************7 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.2   0.0   1.9e-10   1.1e-06      17      55 ..     126     163 ..     112     165 .. 0.93

  Alignments for each domain:
  == domain 1  score: 28.2 bits;  conditional E-value: 1.9e-10
                 -B-TTEEEEEE..EEEECTTEEEEEE..CCCEEEEEGCGEE CS
       SH3_2  17 sfkkGdvikvlslgskdsdgwwegev..gGrvGlfPsslve 55 
                 +f++Gd+i v+   +  + +ww+g +   G+ G+fP ++v+
  KHJ35258.1 126 NFEVGDTIIVY---EYMNQDWWLGKNlrTGQEGVFPQNYVQ 163
                 89*********...**********99999***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       556  (0.0310112); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2017.49
//
Query:       KHJ35259.1  [L=202]
Description: hypothetical protein EV44_g2336 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-06   27.2   2.3    1.2e-05   25.7   1.2    1.9  2  Tim17     Tim17/Tim22/Tim23/Pmp24 family


Domain annotation for each model (and alignments):
>> Tim17  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.7   1.2   6.5e-10   1.2e-05       9      97 ..      47     155 ..      43     171 .. 0.68
   2 ?    1.2   0.0     0.025   4.5e+02      53      83 ..     163     194 ..     151     199 .. 0.61

  Alignments for each domain:
  == domain 1  score: 25.7 bits;  conditional E-value: 6.5e-10
       Tim17   9 gvlGallGavfglvkgsrradtp.................apskerlreglrsvgkrgpslGknfgvvgglysgiecaleklRgkediwnsvaAGaltG 90 
                  ++G++ G++ g+  gs+ a+                   +  k +  + +   +k+g+ +G ++ ++++ + ++e ++++ Rg +d++n++ +G++  
  KHJ35259.1  47 TAIGFVSGTILGIGHGSKIAALRfraenshrlpttptgwyLYHKSKNYHTILGGVKEGAGMGLRLSTWTAAFFIVENIFDRWRGEKDFLNTIGGGLAVA 145
                 4556666666666666655554344446666666666665444444666666679****************************************7654 PP

       Tim17  91 all...ragp 97 
                 + +   ++ p
  KHJ35259.1 146 GGFswwNSMP 155
                 4442344443 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.025
       Tim17  53 GknfgvvgglysgiecaleklRgkediw.nsv 83 
                 +k   vvg+ y +++ +++ +Rg+e  + n +
  KHJ35259.1 163 AKLSLVVGLAYGLAQDVISLARGRELSYvNFI 194
                 44445666666666666666666666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       405  (0.0225891); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.42
# Mc/sec: 1454.63
//
Query:       KHJ35260.1  [L=394]
Description: putative mitochondrial folate carrier protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-57  190.0   5.2    1.2e-19   70.0   0.1    3.2  3  Mito_carr      Mitochondrial carrier protein
     0.0029   17.1   0.0     0.0066   15.9   0.0    1.5  1  Peptidase_C3G  Tungro spherical virus-type peptidase


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.6   0.1   7.2e-18   6.4e-14       7      89 ..      13      94 ..       8     101 .. 0.87
   2 !   70.0   0.1   1.4e-23   1.2e-19       5      95 ..     127     215 ..     124     217 .. 0.92
   3 !   69.6   0.1   1.8e-23   1.6e-19       3      93 ..     233     321 ..     231     324 .. 0.93

  Alignments for each domain:
  == domain 1  score: 51.6 bits;  conditional E-value: 7.2e-18
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHH.HGGGTTHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr  7 kellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGl.rglyrGllpnllrvapasalkfvlyetl 89
                 e +aG +ag+v+tl+ +Pldv+Ktrlq+ ++++++     +  +++ ++ +      lyrGl+pnl++++ ++++ +++  ++
  KHJ35260.1 13 IETVAGFTAGTVSTLIFHPLDVIKTRLQIYRSTTSTPVT--TYTIVRGLVSSGKPlQRLYRGLMPNLVGNSGSWSIFLGFKSVI 94
                5789**************************999988664..77789999988776478*******************9998766 PP

  == domain 2  score: 70.0 bits;  conditional E-value: 1.4e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 ++  ++a++++g++ +l t+P++v+Ktr+ ++ + ++ ++ +++++ +k iy++eG++g+yrG++++ll+++  +a++f++ye +k++  k
  KHJ35260.1 127 PFDFFIASAVSGMMVSLTTNPIWVLKTRMVSSDRGKNGAY-ENMWQGVKLIYQKEGVKGFYRGAGISLLGNS-HAAVQFSVYEPIKKFWRK 215
                 66779************************99999887755.55*****************************.9*************9877 PP

  == domain 3  score: 69.6 bits;  conditional E-value: 1.8e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 l++l++l+++g a+++a++vt+Pl vvK rlq+++  + + ++  i+ v +++++e+G r++++Gl++nl+rv pa+ ++f++ye ++ +l
  KHJ35260.1 233 LGTLATLAISGSAKIIAGTVTYPLQVVKSRLQVSELDHISGGR--IMGVSGRLWREQGWRAFFKGLNINLVRVLPATWVTFLVYENTRYYL 321
                 678899****************************999887554..****************************************998766 PP

>> Peptidase_C3G  Tungro spherical virus-type peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   7.3e-07    0.0066      46      95 ..     302     351 ..     289     363 .. 0.89

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 7.3e-07
  Peptidase_C3G  46 vvlpahylealeeedtlyficfslviklrlerdrvtlvnsfqdlvvwdlG 95 
                     vlpa ++  l  e+t y++++sl +k +  ++r + vn++  l vwd  
     KHJ35260.1 302 RVLPATWVTFLVYENTRYYLAVSLPVKSKSSPSRGASVNTQHALHVWDSQ 351
                    589*********************************************64 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (394 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       372  (0.0207485); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.26s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 2795.60
//
Query:       KHJ35261.1  [L=97]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (97 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 704.55
//
Query:       KHJ35262.1  [L=775]
Description: putative 2-dehydropantoate 2-reductase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-27   95.2   0.0    1.2e-26   93.1   0.0    1.9  2  ApbA      Ketopantoate reductase PanE/ApbA
      8e-19   68.1   0.0    1.3e-18   67.4   0.0    1.3  1  ApbA_C    Ketopantoate reductase PanE/ApbA C terminal


Domain annotation for each model (and alignments):
>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.1   0.0   1.4e-30   1.2e-26       2     151 ..      11     167 ..      10     168 .. 0.97
   2 ?   -1.0   0.0      0.13   1.2e+03      15      61 ..     458     508 ..     455     520 .. 0.77

  Alignments for each domain:
  == domain 1  score: 93.1 bits;  conditional E-value: 1.4e-30
                 EEES-SHHHHHHHHHHHH.HTHCEEEE-SCHHHHHHHHHCEEEEETT.CEEEEEECEEECCH...SCCCCS-ESEEEE-SSGGGHHHHHHH.HGGGECT CS
        ApbA   2 ailGaGaiGsllaakLak.agadvtlilrsrrlealkknGlrltseg.geeilrppealsae...ekselepidlvivtvKayqteealee.ikplldp 94 
                 + +G +ai+ +l ++L++ +++dvtl+++s  ++a+++ G++++s + g+e+++p++++  +   ++++++ +d+v+++vKa+++++ +++ i+++++p
  KHJ35262.1  11 LSVGGNAISAFLSWRLQAtNACDVTLVWKSG-FDAVSQYGISFKSTTfGNERFKPRHVVKVPedvAIQNKGAFDYVLLCVKALPDVYDMASvIESVVTP 108
                 679***************9************.**************************999999***********************99998******* PP

                 CEEEEEESSS...SCHHHHHTTTSTTSEEEEEEEE-EEEEEETTEEEECS--EEEEEESS CS
        ApbA  95 ntvvlllqNG...lgheeelrealpkprvlggvtthgatregpgevhhagkgeikigela 151
                 + ++++l N+   lg e +l++++p + +l+ v+  ++t++g  e++h+g+ ei++g+ +
  KHJ35262.1 109 K-HTCILVNTthtLGIEAQLETRFPSNVILSLVCGAEITQLGASEFEHKGSTEIWVGPSN 167
                 9.*******9999********************************************975 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.13
                 HHHHH.HTHCEEEE-SCHHHHHHHHHCEEEEETT....CEEEEEECEEECCH CS
        ApbA  15 akLak.agadvtlilrsrrlealkknGlrltseg....geeilrppealsae 61 
                 a+L++ a ++  l lr+r+  al+++ +rl+s+g    g++++++p ++ ++
  KHJ35262.1 458 AELSQiALRERELALRQRE-IALREQEMRLKSVGiaprGSRRVQKPPSIKNV 508
                 6677777777788889884.4599********99999999999999999887 PP

>> ApbA_C  Ketopantoate reductase PanE/ApbA C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.4   0.0   1.4e-22   1.3e-18       1     124 [.     200     323 ..     200     324 .. 0.94

  Alignments for each domain:
  == domain 1  score: 67.4 bits;  conditional E-value: 1.4e-22
      ApbA_C   1 dirlarweKllinaainpltalldckn.gellespelralvrallkEalavaeaegvelseerleeaveavlektaanrsSMlqDveagrktEidyinG 98 
                 +ir+ ++e+++  +a+ pl++++d +  + l+e+  +r +++++l+E+l +a+a+ +++ ++ ++e+  + + + +   s M qD++a+r++E+++ +G
  KHJ35262.1 200 NIRQQQYERMIGPIAFHPLSVVFDTPShASLIEKVGVRIMIQEILDELLSIATAQECTFVPD-FKEKTIEEMIRPSSFNSIMFQDYAARRPMEVETYLG 297
                 79************************978888******************************.7777777777778889******************** PP

      ApbA_C  99 avvklAeklgvetPvnellyellkal 124
                  ++k A+  gv +P++e++y++l+ l
  KHJ35262.1 298 SPIKQAQITGVRVPRIETIYAILHNL 323
                 ***********************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (775 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       406  (0.0226449); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.23s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 5707.31
//
Query:       KHJ35263.1  [L=1136]
Description: putative structural maintenance of chromosomes 5 smc5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-17   62.7  20.9    2.3e-16   59.9  21.0    2.7  1  SMC_N         RecF/RecN/SMC N terminal domain
    3.7e-17   63.5   8.8    3.7e-17   63.5   8.8    5.4  3  AAA_23        AAA domain
    9.5e-06   25.6  45.2     0.0051   16.6  17.8    4.2  2  AAA_15        AAA ATPase domain
    1.5e-05   25.0  20.3     0.0028   17.5   0.1    4.2  4  AAA_21        AAA domain, putative AbiEii toxin, Type IV TA s
     0.0072   16.0   0.0       0.02   14.6   0.0    1.7  1  AAA_29        P-loop containing region of AAA domain
     0.0092   16.5   7.6     0.0092   16.5   7.6    6.4  4  APG6_N        Apg6 coiled-coil region
  ------ inclusion threshold ------
      0.024   14.6   0.1        7.2    6.7   0.0    3.0  2  hnRNP_Q_AcD   Heterogeneous nuclear ribonucleoprotein Q acidi
      0.046   13.6   0.6       0.22   11.4   0.6    2.2  1  Herpes_IE2_3  Herpes virus intermediate/early protein 2/3
      0.073   13.6   0.0      0.073   13.6   0.0    5.5  1  ABC_tran      ABC transporter
       0.14   11.7  10.6       0.57    9.7   0.0    4.5  4  AAA_27        AAA domain
       0.15   12.5   0.0       0.15   12.5   0.0    3.7  6  AAA           ATPase family associated with various cellular 
       0.23   10.3   1.2        0.6    9.0   1.2    1.6  1  Tannase       Tannase and feruloyl esterase


Domain annotation for each model (and alignments):
>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.9  21.0   1.6e-19   2.3e-16       5     196 ..      95    1089 ..      91    1094 .. 0.98

  Alignments for each domain:
  == domain 1  score: 59.9 bits;  conditional E-value: 1.6e-19
                  EEEESETTEECEEEEEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEEEETTEESSSSSSCEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N    5 leienFksyagktvilpfsksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitfdnedkklkiekeevsisr 101 
                  +++enF +y  ++++    +s+++i+GpNG GKs+l+ Ai+  LG + a+  r++++ + +++     ++ +a +ei ++ +++      ++++i+ 
  KHJ35263.1   95 VKLENFVTY--ERAEFYPGPSLNMIIGPNGTGKSSLVCAICLGLGSSPAQLGRATQVGEFVKH-----NMPEAVIEIALQGPSNL-----KNYVIRS 179 
                  7899*****..7999999***************************9999777999****9998.....899999***98888887.....8899999 PP

                  EEETTSE.EEEEETTEEE-HHHHHHHHHCTT-STT.............................................................. CS
                  xxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx.............................................................. RF
       SMC_N  102 rvkrkge.seykingkevtkkevsellesagiske.............................................................. 135 
                  +++r+++  ++++ng++ + k v+ l+e+  i+++                                                              
  KHJ35263.1  180 QIIREDNsRQWWLNGRRSSLKAVKILVEKLSIQIDnlcqflpqekvaefsaltpselllqtqraaappeilekheelkklrkaevalethneatkqe 276 
                  998877636899************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ35263.1  277 lkihetrqqnleaqvqklqerlkiqenisllqkkipfveyqialakynaakaqkqtarklfeelesriaptlrsmeqkkdylnrvdsivkqrkaklq 373 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ35263.1  374 aldrefiefsstheklaeevslievnlaseidqekkmkikigncqkninnwqkqseirtlvfnasewnqrvrakeqesrelnsqiaelktsldelfs 470 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ35263.1  471 rgratkqnideankelrqfdsregqlmnrleqqsrdtaaawkwiqehqnefekevfgpplltcsmknplytrevesligrndmitlsvqtkadfkrl 567 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ35263.1  568 sdqlngtmrltditikqvdypavpagrplttqdmkrygmegwaidqvdgpesvlamlcdsarldrsaiaqnditeenyqnilreeklnvwvtktqkf 664 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ35263.1  665 ivtrrkeygpsavstitrpvprerfwtdqpidasaraeieqrieslqseftllkqqndslksrmndlkdqdlaiqdeiktiqkekaklqeadkefrs 761 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ35263.1  762 lperikqeeinlqkareklfdhrdatknlnnqhddvavkramnaiaykehiskiriahedifeaqirlieaesdvtnitainrsivqqrdeelqkvr 858 
                  ************************************************************************************************* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ35263.1  859 dideeakkikaiaskalvicknlladpenesiteqlahqdesttvetlemeiaaeeskleflvtdnpnaieqfearqeklqklnslieendkklqkv 955 
                  ************************************************************************************************* PP

                  ......................................................................CS-HHHHHHHHHHHHHHHHCCS--SEE CS
                  ......................................................................xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  136 ......................................................................lLSgGektLvalaLlfAiqkvkpaply 162 
                                                                                          SgGe++++ +  l+A+q+   +p+ 
  KHJ35263.1  956 rrkietircewepaldrliqtisnafsynfeqigcagevsiykdddfenwaiqikvkfrenealqildqhRQSGGERSVSTIFYLMALQSLATSPFR 1052
                  **********************************************************************99************************* PP

                  EECTTTTTS-HHHHHHHHHHHH...HHCTTSEEEEE- CS
                  xxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxx RF
       SMC_N  163 llDeidaaLDeknvkkvaellk...eksknaQfivis 196 
                  ++Dei++ +D +n + v e++     k+ ++Q++ i+
  KHJ35263.1 1053 VVDEINQGMDPRNERMVHERIVriaCKEYTSQYFLIT 1089
                  ****************999876222344558888887 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.5   8.8   2.5e-20   3.7e-17       2     195 ..      95     301 ..      95     381 .. 0.73
   2 ?   -1.9  19.2       2.6   3.9e+03     115     192 ..     697     780 ..     626     793 .. 0.63
   3 ?   -3.2  20.6       6.7     1e+04      86     196 ..     810     963 ..     775     973 .. 0.48

  Alignments for each domain:
  == domain 1  score: 63.5 bits;  conditional E-value: 2.5e-20
      AAA_23   2 LkienfrsfrdqeidFskgltlItGpNGaGKTTildAiklaLygetprlsrks......grgfeksdveiese..gkvkay.veltfenkdgrytrsie 91 
                 +k+enf  +++ e+  ++ l+ I+GpNG+GK+++++Ai+l+L+  +++l+r        + ++ ++ +ei+ +   + k+y ++ ++ ++d+      +
  KHJ35263.1  95 VKLENFVTYERAEFYPGPSLNMIIGPNGTGKSSLVCAICLGLGSSPAQLGRATqvgefvKHNMPEAVIEIALQgpSNLKNYvIRSQIIREDNS----RQ 189
                 589*****************************************9999999875544443333333333333343555556555555555552....33 PP

      AAA_23  92 rerelskkkgkttkka...klelleideleqfisellgskkiil.nlilflgqer.....feefelkdkkerleelekeleeled.ekkllekle.qek 179
                 +  + ++++ k +  +   ++ +++id+l+qf++++   +++ l +  l+l+ +r     +  +e+ +++++l+++e +le+ ++ +k++l+ +e +++
  KHJ35263.1 190 WWLNGRRSSLKAV--KilvEKLSIQIDNLCQFLPQEKVAEFSALtPSELLLQTQRaaappE-ILEKHEELKKLRKAEVALETHNEaTKQELKIHEtRQQ 285
                 3333332222222..1234667788899999999999988887768888888888888851.4444556667777777777754437777777753555 PP

      AAA_23 180 ekekeleeleeeleei 195
                 + e++ ++l+e+l+ +
  KHJ35263.1 286 NLEAQVQKLQERLKIQ 301
                 6666777777777633 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.6
      AAA_23 115 deleqfisellgskkiilnlilflgqerfeefelkdkkerleelekeleeledekkllekl........eqekekekeleeleeel 192
                 +  + +i++ ++s +++++l+  ++q +  + + +d k++  ++++e++++++ek +l++         e++k++e +l++ +e+l
  KHJ35263.1 697 ASARAEIEQRIESLQSEFTLL--KQQNDSLKSRMNDLKDQDLAIQDEIKTIQKEKAKLQEAdkefrslpERIKQEEINLQKAREKL 780
                 334566777777766666655..577776667778888888888888888888777777776666666755555555555555554 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 6.7
      AAA_23  86 y................................trsiererelskkkgkttkkaklellei..............deleqfisellgskkiilnlilfl 138
                 +                                +rsi ++r +  +k + ++++++++  i               e+e ++++l +++          
  KHJ35263.1 810 EhiskiriahedifeaqirlieaesdvtnitaiNRSIVQQRDEELQKVRDIDEEAKKIKAIaskalvicknlladPENESITEQLAHQD---------- 898
                 22222223333344444445555444445555555566666666665555555555555553222222222222222222222222222.......... PP

      AAA_23 139 gqer................feefelkdkkerleelekeleeledekkllekl.eqekekekeleeleeeleeil 196
                    +                + ef+  d ++++e++e  +e+l++ ++l+e++ +       +l+++++++e+i 
  KHJ35263.1 899 ---EsttvetlemeiaaeesKLEFLVTDNPNAIEQFEARQEKLQKLNSLIEENdK-------KLQKVRRKIETIR 963
                 ...2345555444444444466666688888999999999999999988887644.......4445555544443 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6  17.8   3.4e-06    0.0051       6     271 ..      95     482 ..      91     528 .. 0.49
   2 !    5.7  19.5    0.0067        10      60     235 ..     635     891 ..     623    1089 .. 0.66

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 3.4e-06
      AAA_15   6 ikikNFRslkdveidlseeltvliGkNnsGKSsilealdlFlnnkekkn................................................kk 56 
                 +k++NF  ++ +e    ++l+ +iG+N++GKSs++ a+ l l  + + +                                                + 
  KHJ35263.1  95 VKLENFVTYERAEFYPGPSLNMIIGPNGTGKSSLVCAICLGLGSS-PAQlgratqvgefvkhnmpeavieialqgpsnlknyvirsqiirednsrqwW- 191
                 89********988888888*******************7777755.4447888888888888888777777777777777776666444444444330. PP

      AAA_15  57 vikiekedleifeniseskdikIdvef............................................................aekekakeyekt 95 
                            +  +s  k +kI ve                                                                ++a + e  
  KHJ35263.1 192 ----------LNGRRSSLKAVKILVEKlsiqidnlcqflpqekvaefsaltpselllqtqraaappeilekheelkklrkaevaletH--NEATKQELK 278
                 ..........333333333333333336666666667777777777777777777777777666655555544444444333332210..222222222 PP

      AAA_15  96 lkskekkkadlllkkkesdlk..ktikdkklklkknelsdekisvekkkskkelpkekeeklekekeelkidkedlkklikkleeslkkee........ 184
                  ++++++  + +++k++++lk  + i   + k++  e++    +++  k+ k+   +  e+le++++ +    e +k+ +++  +++k+ +        
  KHJ35263.1 279 IHETRQQNLEAQVQKLQERLKiqENISLLQKKIPFVEYQIALAKYNAAKAQKQTARKLFEELESRIAPTLRSMEQKKDYLNRVDSIVKQRKaklqaldr 377
                 222222222223333333222111111111111111122222222222222222222223333333333333444444444444444444477777777 PP

      AAA_15 185 ...elknvlksaiiklllisakRnvsdedsekkssllgklkekileealqekl................eeelteklkeiqeklkeidkklaeelk..k 262
                    e+++  +++++++ li+    ++ ++++k +  +g+++++i+   +q++                 +   ++++ e+++ + e++  l+e  +  +
  KHJ35263.1 378 efiEFSSTHEKLAEEVSLIEVNLASEIDQEKKMKIKIGNCQKNINNWQKQSEIrtlvfnasewnqrvraK---EQESRELNSQIAELKTSLDELFSrgR 473
                 7775555555555555555444444444444444444555555544444444355555555554443221...23333333333333333333333332 PP

      AAA_15 263 ilkkkidki 271
                   k++id+ 
  KHJ35263.1 474 ATKQNIDEA 482
                 223333332 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0067
      AAA_15  60 iekedleifeniseskdikIdvef....................................aekekakeyektlkskekkkadlllkkkesdlkktikdk 122
                 i+++d+ ++++++  ++ k++v+                                     +  + +   e +++ +  +++ +llk+ +++lk++++d 
  KHJ35263.1 635 IAQNDITEENYQNILREEKLNVWVtktqkfivtrrkeygpsavstitrpvprerfwtdqpI--DASARAEIEQRIESLQSEFTLLKQQNDSLKSRMNDL 731
                 6788888888999999999999999999999999999999999999999999988874441..444555555666666677778999999999999888 PP

      AAA_15 123 klklkknelsdekisvekkks....kkelpkekeeklekekeelkidkedlkklikkleeslkkee.elknvlksaiiklllisakRnvsdedsekkss 216
                 k ++    ++de+++++k+k+    + + + +  e  ++e+ +l++  e+l++  +  ++  ++++ +  +   +ai + + is+ R + ++  e +  
  KHJ35263.1 732 KDQDL--AIQDEIKTIQKEKAklqeADKEFRSLPERIKQEEINLQKAREKLFDHRDATKNLNNQHDdVAVKRAMNAIAYKEHISKIRIAHEDIFEAQIR 828
                 87765..78888888888888654444444444445555566666668888888888888888888877777788888888999999999999999999 PP

      AAA_15 217 llgklkekileealqekl............................................e 235
                 l+++  + ++ +a++ +                                             +
  KHJ35263.1 829 LIEAESDVTNITAINRSIvqqrdeelqkvrdideeakkikaiaskalvicknlladpenesiT 891
                 999999999998887666555333222222222222222222222222222222222222220 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0     1e-05     0.015       1      19 [.     114     132 ..     114     205 .. 0.88
   2 ?   -1.6   0.8       1.2   1.8e+03      49     136 ..     401     490 ..     372     529 .. 0.77
   3 ?    1.2   5.3      0.18   2.6e+02      68     219 ..     641     786 ..     632     837 .. 0.85
   4 !   17.5   0.1   1.9e-06    0.0028     107     296 ..     919    1089 ..     846    1093 .. 0.69

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 1e-05
      AAA_21   1 lnvliGpNgsGKSnLLdal 19 
                 ln++iGpNg+GKS+L  a+
  KHJ35263.1 114 LNMIIGPNGTGKSSLVCAI 132
                 79************98777 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.2
      AAA_21  49 ldlydpeipfefeieeflsqgvryryglrlersqv..eeklssvetllesgllldkrsleeedvfnpeargirggvsvfslkelsvsepn 136
                   ++d e+++++ i + +++ ++++   ++    +  +e+ ++v+ +++    l+++++e     +  +++ r+++++  ++++++ +++
  KHJ35263.1 401 ASEIDQEKKMKIKIGNCQKNINNWQKQSEIRTLVFnaSEWNQRVRAKEQESRELNSQIAELKTSLDELFSRGRATKQNIDEANKELRQFD 490
                 556677777888888888888888888888888888888888888888888888888888888888888888888888777777776655 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.18
      AAA_21  68 qgvryryglrlersqveeklssvetllesgllldkrsleeedvfnpeargirggvsvfslkelsvsepndlqfgkaltditsrawsllllldglrke.. 164
                 ++ +y+ +lr e+ +v           + + +++  ++++    ++ +++i   v  ++ ++  +++++++  +++++++    ++ll+ +++++k   
  KHJ35263.1 641 TEENYQNILREEKLNV-----------WVTKTQKFIVTRRKEYGPSAVSTITRPVPRERFWTDQPIDASARAEIEQRIESLQSEFTLLKQQNDSLKSrm 728
                 5666666666666666...........77888888899999999999999999********************************************** PP

      AAA_21 165 ...rigllnifadyfgfakekrllqrlvrslklveielsdlgegeeliasvderlrer 219
                    +   l i+++  + +kek  lq+  ++++    ++  +++  ++  +  ++ r++
  KHJ35263.1 729 ndlKDQDLAIQDEIKTIQKEKAKLQEADKEFRSLPERIKQEEINLQKAREKLFDHRDA 786
                 ***999999****************999999999999999999998888887777775 PP

  == domain 4  score: 17.5 bits;  conditional E-value: 1.9e-06
      AAA_21  107 eedvfnpeargirggvsvfslkelsvsepndlqfgkaltditsrawsllllldglrkerigllnifadyfgfakekrllqrlvrslklveielsdlg 203 
                    + +np+a ++++ ++++ +k  s++e+nd++  k++ +i    +++++ l      + + + i++++ +  + ++ +++ +   ++++ ++    
  KHJ35263.1  919 FLVTDNPNAIEQFEARQEKLQKLNSLIEENDKKLQKVRRKIETIRCEWEPAL------DRLIQTISNAFSYNFEQIGCAGEVSIYKDDDFENWAIQI 1009
                  3445566666666666666666666666666666666666666666666666......444444444444444444444444444444444444444 PP

      AAA_21  204 egeeliasvderlrergvvflengdgqelparelSdGtkrll..alltallralkkgsllliDEpEngLHPkll....rrllellkelsrngaQvil 294 
                                   v f en+  q l+ +  S G +++   + l al +++ + ++ ++DE+  g++P+      +r++++  ++ +  +Q +l
  KHJ35263.1 1010 ----------------KVKFRENEALQILDQHRQSGGERSVStiFYLMALQSLATS-PFRVVDEINQGMDPRNErmvhERIVRIACKEYT--SQYFL 1087
                  ................899999*******************864444445555544.**************5442256777777655544..78777 PP

      AAA_21  295 tT 296 
                   T
  KHJ35263.1 1088 IT 1089
                  76 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.6   0.0   1.3e-05      0.02       8      42 ..      99     132 ..      93     141 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.6 bits;  conditional E-value: 1.3e-05
      AAA_29   8 NWgtfdghtieidlkgatlltGpsGsGKSTllDAi 42 
                 N  t+++ ++   ++   +++Gp+G+GKS+l+ Ai
  KHJ35263.1  99 NFVTYERAEFYPGPS-LNMIIGPNGTGKSSLVCAI 132
                 556666655555555.599************9887 PP

>> APG6_N  Apg6 coiled-coil region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   9.4     0.028        41      44      93 ..     246     300 ..     203     306 .. 0.73
   2 ?    0.9  10.1      0.42   6.2e+02      17     125 ..     322     427 ..     316     432 .. 0.78
   3 ?    1.1  15.1      0.35   5.2e+02      44     113 ..     430     508 ..     399     524 .. 0.58
   4 !   16.5   7.6   6.2e-06    0.0092      45     122 ..     703     780 ..     659     795 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.028
      APG6_N  44 k.....qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelea 93 
                       ++eel++l++   +le   e+  +eLk  e+ +++lea++++l+e l+ 
  KHJ35263.1 246 PpeileKHEELKKLRKAEVALETHNEATKQELKIHETRQQNLEAQVQKLQERLKI 300
                 0444445677888888888888888888888888888888888888888887765 PP

  == domain 2  score: 0.9 bits;  conditional E-value: 0.42
      APG6_N  17 qleqaekerdaYeeflkklkkekkeeekqdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynelqlellel 115
                 ++++a++++++ ++  ++l+++   +     ++e+ ++ l ++++  ++  ++L++l++e  e  +  ++l+ee + +e + + ++ + ++ +++  ++
  KHJ35263.1 322 KYNAAKAQKQTARKLFEELESRIAPT---LRSMEQKKDYLNRVDSIVKQRKAKLQALDREFIEFSSTHEKLAEEVSLIEVNLASEIDQEKKMKIKIGNC 417
                 67888888888888888888885443...4688888888888888888888888888888888888888888888888888888888888888888888 PP

      APG6_N 116 eeeldsleaq 125
                 ++  +  + q
  KHJ35263.1 418 QKNINNWQKQ 427
                 8877666555 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.35
      APG6_N  44 k.........qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynelqlell 113
                           +++ +++ e+e ++l+++ +el + L+el +  ++ ++ + ++ +el++ +  e + +++  +++++ +
  KHJ35263.1 430 IrtlvfnaseWNQRVRAKEQESRELNSQIAELKTSLDELFSRGRATKQNIDEANKELRQFDSREGQLMNRLEQQSRDTA 508
                 2445555555555666666666666666666666666666666666666666666666666666666666666665554 PP

  == domain 4  score: 16.5 bits;  conditional E-value: 6.2e-06
      APG6_N  45 qdeeleeleeeleklekeeeelleeLkelekereeleaelaaleeelealeeeeerfwreynelqlelleleeeldsl 122
                  ++ +e+l+ e+  l+++ ++l + +++l++++ ++++e++++++e+++l+e  ++f +     + e ++l++ +++l
  KHJ35263.1 703 IEQRIESLQSEFTLLKQQNDSLKSRMNDLKDQDLAIQDEIKTIQKEKAKLQEADKEFRSLPERIKQEEINLQKAREKL 780
                 45689999********************************************99999988888888888888888765 PP

>> hnRNP_Q_AcD  Heterogeneous nuclear ribonucleoprotein Q acidic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.0     0.023        34       7      27 ..     462     482 ..     453     494 .. 0.82
   2 ?    6.7   0.0    0.0048       7.2      20      64 ..     998    1042 ..     986    1045 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.023
  hnRNP_Q_AcD   7 aekLdelfrsgkltasdlDer 27 
                  + +Ldelf +g+ t++ +De+
   KHJ35263.1 462 KTSLDELFSRGRATKQNIDEA 482
                  568****************96 PP

  == domain 2  score: 6.7 bits;  conditional E-value: 0.0048
  hnRNP_Q_AcD   20 tasdlDeraleaLkslpeegAlaVlkqfkesdlskvsNksaylmg 64  
                   + +d+++ a+++  +++e++Al++l+q ++s  ++  ++ +ylm 
   KHJ35263.1  998 KDDDFENWAIQIKVKFRENEALQILDQHRQSGGERSVSTIFYLMA 1042
                   56899999*********************9999988888888885 PP

>> Herpes_IE2_3  Herpes virus intermediate/early protein 2/3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.6   0.00015      0.22      17      61 ..     265     309 ..     252     358 .. 0.72

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00015
  Herpes_IE2_3  17 rlckledsnakqiqifytRskevknaidalrekLlslpNltvsap 61 
                    l   ++++++++ i  tR ++++ ++++l+e+L +  N++++  
    KHJ35263.1 265 ALETHNEATKQELKIHETRQQNLEAQVQKLQERLKIQENISLLQK 309
                   566677899999****************************99753 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.0   4.9e-05     0.073      15      66 ..     116     167 ..     107     231 .. 0.65

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.9e-05
                 EEEESTTSSHHHHHHHHT...TSS--SEEEEEETTCEGGGB-HHHCCHCEEEE-S CS
                 xxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  15 aivGenGaGKStLlklla...gllkpteGeilldgkdlkeqeleslrkeigvlpq 66 
                  i+G+nG+GKS+L+ +++   g +  + G+ +  g+ +k+   +  ++ i++  q
  KHJ35263.1 116 MIIGPNGTGKSSLVCAIClglGSSPAQLGRATQVGEFVKH---NMPEAVIEIALQ 167
                 79************99972223333355555444444444...444455555555 PP

>> AAA_27  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   0.0   0.00038      0.57      24      46 ..     110     132 ..      97     136 .. 0.86
   2 ?    4.5   0.6     0.015        23     156     196 ..     452     492 ..     433     502 .. 0.88
   3 ?   -1.0   0.3      0.75   1.1e+03     153     201 ..     698     746 ..     696     752 .. 0.83
   4 ?   -1.1   0.2      0.78   1.2e+03     158     191 ..     766     798 ..     750     813 .. 0.77

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00038
      AAA_27  24 eeadlhliyGpNEAGKstalrAi 46 
                   ++l +i+GpN +GKs+++ Ai
  KHJ35263.1 110 PGPSLNMIIGPNGTGKSSLVCAI 132
                 5789**************99987 PP

  == domain 2  score: 4.5 bits;  conditional E-value: 0.015
      AAA_27 156 aslrevleaLeaeadelfkprkskkrainealeeleeakke 196
                 ++l++ +++L+++ delf++ +++k++i ea++el++ +++
  KHJ35263.1 452 RELNSQIAELKTSLDELFSRGRATKQNIDEANKELRQFDSR 492
                 6789999******************9*****9999987665 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.75
      AAA_27 153 aGlaslrevleaLeaeadelfkprkskkrainealeeleeakkelreaq 201
                 ++ a++++ +e+L++e + l +++ s k ++n+ +++  + + e+++ q
  KHJ35263.1 698 SARAEIEQRIESLQSEFTLLKQQNDSLKSRMNDLKDQDLAIQDEIKTIQ 746
                 55688999999*****999999999999999999999988888888766 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 0.78
      AAA_27 158 lrevleaLeaeadelfkprkskkrainealeele 191
                 +++   +L++ +++lf++r ++k ++n+++++++
  KHJ35263.1 766 IKQEEINLQKAREKLFDHRDATK-NLNNQHDDVA 798
                 56666789999999999999998.7777776654 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   0.0    0.0001      0.15       2      49 ..     116     175 ..     115     186 .. 0.76
   2 ?   -2.9   0.1       5.7   8.5e+03      37      74 ..     335     368 ..     312     410 .. 0.64
   3 ?   -2.9   0.1       5.8   8.7e+03      66      66 ..     439     439 ..     369     491 .. 0.58
   4 ?   -1.7   0.3       2.4   3.6e+03      68      99 ..     888     916 ..     817     943 .. 0.60
   5 ?   -1.5   0.1       2.1   3.1e+03      13      56 ..     906     948 ..     899     958 .. 0.69
   6 ?   -2.4   0.0       4.1   6.1e+03      60      86 ..    1050    1074 ..    1006    1102 .. 0.56

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 0.0001
                 EEESSTTSSHHHHHHHHHHHHTHE............EEEEETTTCSSSSTTHHHHHHHHH CS
         AAA   2 llyGppGtGKTllakavakelgve............fleisgsellskyvgesekkirel 49 
                 +++Gp GtGK++l+ a++  lg++            f++ +++e + ++  +++++++++
  KHJ35263.1 116 MIIGPNGTGKSSLVCAICLGLGSSpaqlgratqvgeFVKHNMPEAVIEIALQGPSNLKNY 175
                 579*****************9755445555555556888888888877777777777766 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 5.7
                 SSTTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHH CS
         AAA  37 kyvgesekkirelfkeakekakpsilfiDEidalaksr 74 
                 k+++e e++i+ +++++++k+      +  +d+++k+r
  KHJ35263.1 335 KLFEELESRIAPTLRSMEQKK----DYLNRVDSIVKQR 368
                 455555666666665555544....2455556666555 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 5.8
                 T CS
         AAA  66 E 66 
                 E
  KHJ35263.1 439 E 439
                 2 PP

  == domain 4  score: -1.7 bits;  conditional E-value: 2.4
                 GGHHHHHTTCCCHHHHHHHHHHHHHHHHTTTS CS
         AAA  68 dalaksrsgseseeeervvnqLlteldgvkkk 99 
                 ++++++    ++++e+++v++L  e+  +++k
  KHJ35263.1 888 ESITEQL---AHQDESTTVETLEMEIAAEESK 916
                 3333333...5666666666666666666664 PP

  == domain 5  score: -1.5 bits;  conditional E-value: 2.1
                 HHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHT CS
         AAA  13 llakavakelgvefleisgsellskyvgesekkirelfkeakek 56 
                 l ++  a+e++ efl ++ ++ + + ++++++k+++l + ++e+
  KHJ35263.1 906 LEMEIAAEESKLEFLVTDNPNAI-EQFEARQEKLQKLNSLIEEN 948
                 55677788899999999999999.54555555555555544444 PP

  == domain 6  score: -2.4 bits;  conditional E-value: 4.1
                  EEEEEETGGGHHHHHTTCCCHHHHHHH CS
         AAA   60 silfiDEidalaksrsgseseeeervv 86  
                     ++DEi + +  r  +e+ ++er+v
  KHJ35263.1 1050 PFRVVDEINQGMDPR--NERMVHERIV 1074
                  444556665555555..4444444443 PP

>> Tannase  Tannase and feruloyl esterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.0   1.2    0.0004       0.6     264     351 ..     409     497 ..     397     516 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.0004
     Tannase 264 eetdaagelasstakwelgstvka.esaaeealrnvvakfardlnldlsslklealkerkttslvelsslidatepdlskfrsrgGkli 351
                 +   + g+ +++ ++w+ +s+  +    a+e+ + v ak+++  +l+++ ++l+++ ++ +   ++ +++id  + +l +f sr G+l+
  KHJ35263.1 409 KMKIKIGNCQKNINNWQKQSEIRTlVFNASEWNQRVRAKEQESRELNSQIAELKTSLDELFSRGRATKQNIDEANKELRQFDSREGQLM 497
                 444567888888899988874333034566777766679999***********9999999***************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2393  (0.133471); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                       137  (0.00764125); expected 17.9 (0.001)
Passed Fwd filter:                        77  (0.00429472); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              12  [number of targets reported over threshold]
# CPU time: 1.93u 0.39s 00:00:02.31 Elapsed: 00:00:00.65
# Mc/sec: 5306.85
//
Query:       KHJ35264.1  [L=1033]
Description: putative fatty acid oxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-37  129.4   0.0    5.3e-23   81.4   0.0    3.1  3  An_peroxidase  Animal haem peroxidase


Domain annotation for each model (and alignments):
>> An_peroxidase  Animal haem peroxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0   2.6e-10   4.7e-06       1      87 [.      87     166 ..      87     171 .. 0.88
   2 !   19.2   0.0   2.1e-08   0.00037     147     181 ..     172     206 ..     166     219 .. 0.83
   3 !   81.4   0.0     3e-27   5.3e-23     218     507 ..     218     549 ..     215     555 .. 0.76

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 2.6e-10
                    S--TTSTTSSTTSTTTT-TTEE-BBSS-----TCG.GTTS--....SHHHHHHHHCTB.-SS---B.-SCBHHHHHHHHHHHCCC--B. CS
  An_peroxidase   1 yrsidGscNnlknpewGsagtpfkRllpaaYedgvseprgssgselPsprevsnklla.ddeslpd.akltlllmqwgqfidhDltstp 87 
                    yr +dG +Nn++ p++G++gtp++R++++     +++        lP+p ++  +ll  +++++p+ +k++ +l     +i hD++ t 
     KHJ35264.1  87 YRAADGGFNNIRIPDLGRSGTPYARIAKPVK---LQN------IALPDPGVIFDALLVrENKFQPHpNKISSMLFYLASIIIHDIFRTD 166
                    8**************************9973...322......357******998876477999**89*****************9986 PP

  == domain 2  score: 19.2 bits;  conditional E-value: 2.1e-08
                    EESS-SSSSSHHHH-SSHHHHHHHB-SSTT-B--E CS
  An_peroxidase 147 lnqvTsflDasqvYGsseeearkLRsfkgGkLkvs 181
                    + + +s+lD   +YGs+++e++++R+fk+GkLk +
     KHJ35264.1 172 ISNTSSYLDLAPLYGSNQQEQDTVRTFKDGKLKPD 206
                    67889***************************965 PP

  == domain 3  score: 81.4 bits;  conditional E-value: 3e-27
                    HHHHHHHHHHHHHHHHHHHHHHHH..........-TTS-HHH......HHHHHHHHHHHHHHHHHHCTHHHHHCSS.HHHHHH.TT-H.....HH. CS
  An_peroxidase 218 pgLlalhtlflReHNriAeeLkkl..........nphwsdee......lfqeARkiviAliqkItynewLpalLgk.enankyglllk....gky. 291
                    pg+ ++ ++f R HN+++++L+++          np+ +de       lfq+ R+i++ l+ + ++++++  +L+  ++ +k++l ++    +   
     KHJ35264.1 218 PGVGVILIMFNRFHNYVVSKLAAInengrfrkpsNPSAKDEWikydndLFQTGRLITCGLYVNCVLKDYVRTILNLnRTDSKWNLDPRteegK-Sl 312
                    67778889**************999999999999677777764444558**************************623445666777754431.13 PP

                    ..ST-STTS----BHHHHHTHCGGHHHHS-SEEEEE-.G...CCS-EE..EEEEGGGCCCHHHHHTT..H-..CHHHHHHHHCSB-B-S.TT-B-H CS
  An_peroxidase 292 ..kgydesvnpsisneFataafrfghslvpdeierlden...keisee..qklplkdsffnpaelle..gg..ldellrgllsqpaeav.dqnlte 375
                       +  e v  +++ eF + ++r+ hs +++  + +++n   + ++ +   +++l++ ++  +e+ +   +  +d+ +  l +   ++  d  l++
     KHJ35264.1 313 fdIQVPEGVGNQVAAEFNV-IYRW-HSAISERDDQWTQNlysNLFPGKdsDEVTLEEFLRTLDEFEKkiPNdpMDRKFANLSRDSDGKFsDDDLVN 406
                    3334566888888888865.***9.*****999888855555333222557899999999999886634223488888888888888888888888 PP

                    HHHTBBCSTTTTT-........B-HHHHHHHHHHHCT--BHHHHHHHTT----SSCCCC-...SHHHHHHHHHHTTSCCCSBHHHHHHHS-B-TTB CS
  An_peroxidase 376 elrnklfkkseesg........lDlaalniqRgRDhGlpsYnefrrlcglkkaksfedlteeideeeleklkevYgsvediDllvGglaEkplpga 463
                     l+ ++ + s ++g        + +  l i ++R   ++s nefr++ gl + k+fed++   d+++ +kl+++Y++++ ++ + G+++Ekp p  
     KHJ35264.1 407 ILETSICDISGSFGantvpkilRSVEILGIVQSRAWRMASLNEFREASGLLRHKTFEDINP--DPTVCKKLRNLYDHPDCVEFYAGLIVEKPKPPM 500
                    8888776666544433444444777778899*****************************9..99999**********************977544 PP

                    ......SSCHHHHH.HHHHHHHHHHHT-CCGTTTHCHHHHHTHHHHCCHH- CS
  An_peroxidase 464 ......lvGptfac.iiadqfrrlrdgDRFfyenkkqpgvfteeqleeirk 507
                           v  t +  i+ d+ + +r gDRFf+++++  + +t+ +++e++ 
     KHJ35264.1 501 npgsglCVNFTTSYsILSDAVSLVR-GDRFFTTDYTA-KHLTNWGFKEVES 549
                    2333666665655515555555555.*******9777.8999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1033 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       526  (0.0293379); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.30s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 6911.31
//
Query:       KHJ35265.1  [L=551]
Description: putative g1 s-specific cyclin pas1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-05   25.2   0.0    1.8e-05   25.2   0.0    2.3  3  Cyclin    Cyclin
    0.00094   18.9   0.0     0.0018   18.0   0.0    1.5  1  Cyclin_N  Cyclin, N-terminal domain


Domain annotation for each model (and alignments):
>> Cyclin  Cyclin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0     2e-09   1.8e-05     111     161 .]      96     146 ..      50     146 .. 0.82
   2 ?   -3.8   0.0       1.6   1.5e+04      50      86 ..     157     191 ..     151     205 .. 0.63
   3 ?   -1.6   0.5      0.34   3.1e+03      23      44 ..     339     359 ..     287     389 .. 0.67

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 2e-09
                 HHHHHHHHHHHHHHH-SS---HHHHHHHHTS-HHHHHHHHHHHHHHTTT-- CS
      Cyclin 111 hRllivallvatKflvDlsysnekfakvggislkELnkLEidFlflvdFdl 161
                  R+ i al  a+K l+D   + + ++++ g+ +kE+n+ Ei Fl+ v+++l
  KHJ35265.1  96 RRMFISALILASKYLQDRNFTVQAWSRISGLDVKEINRNEITFLLAVNWQL 146
                 599********************************************9975 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 1.6
                 ......T--SS--SS-HHHHHHHHHHHTT--HHHHHH CS
      Cyclin  50 tpkessFatkavpaisigsylsrlqkfgesaplvllg 86 
                 t++ +++ +   p+isi+   +   kf++  + + +g
  KHJ35265.1 157 TQILLKYFSMPHPSISIRT--ISCGKFSSHLKSIIIG 191
                 4556777788888888864..2334555555555555 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.34
                 -----------T.......... CS
      Cyclin  23 tasadsksnlensqkqssshtk 44 
                 ++s+ ++ nl+ns+  ss + k
  KHJ35265.1 339 DTSSAKQMNLSNSKLNSS-SLK 359
                 455666666666444443.333 PP

>> Cyclin_N  Cyclin, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.0   0.0     2e-07    0.0018      74     126 ..      96     146 ..      42     147 .. 0.90

  Alignments for each domain:
  == domain 1  score: 18.0 bits;  conditional E-value: 2e-07
                 HHHHHHHHHHHHHHHSSS---HHHHHHHTTTSS-HHHHHHHHHHHHHHTTT-- CS
    Cyclin_N  74 qlvgatcLllAaKveeisppkledlvyitdeafteeeilemErliLetLnfdl 126
                 +++++++L+lA+K+ +++  +++ +  i++   + +ei++ E ++L + n++l
  KHJ35265.1  96 RRMFISALILASKYLQDRNFTVQAWSRISG--LDVKEINRNEITFLLAVNWQL 146
                 5789************************77..999****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (551 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       476  (0.0265492); expected 358.6 (0.02)
Passed bias filter:                      271  (0.0151152); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 4084.05
//
Query:       KHJ35266.1  [L=324]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-95  318.8   1.3    2.5e-95  318.5   1.3    1.0  1  YIF1      YIF1
    0.00013   21.8   5.0    0.00025   20.8   5.0    1.5  1  Yip1      Yip1 domain
  ------ inclusion threshold ------
       0.66   10.1   3.9         10    6.2   1.4    2.2  2  DUF4107   Protein of unknown function (DUF4107)


Domain annotation for each model (and alignments):
>> YIF1  YIF1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  318.5   1.3   4.2e-99   2.5e-95       2     239 .]      71     322 ..      70     322 .. 0.96

  Alignments for each domain:
  == domain 1  score: 318.5 bits;  conditional E-value: 4.2e-99
        YIF1   2 dpaaqmalqlGqsalsqgqeyveknlnryvsvsalkyyFnVsnsYVlkKlllllfPflhksWsrkseqseesse..ylppredvnapDLYiPlmalvtY 98 
                 dp+aq+++q+Gq+al++g+ey+e+n+nry++vsalk+yFnVsn YV++K+ l+lfP+ hk+Wsrk++   + +e  +l+pred+n+pD+YiPlmalvtY
  KHJ35266.1  71 DPTAQIGFQVGQNALKHGTEYMEQNFNRYFHVSALKHYFNVSNGYVVNKIILVLFPWKHKPWSRKQSVGPNGQEgwFLSPREDINSPDMYIPLMALVTY 169
                 99****************************************************************9776666699*********************** PP

        YIF1  99 illaglllGlqgkFspelLgikassalavvllevlilklglYllnissasslldlvaysgYkfvgvivtlllkll.....lgeglvyylvllylvlala 192
                 ill+++l  l++ F+pelLg++ + a+++v++e+++lklg+Yll+is++s+lldlvaysgYkfvg ivtll++ +     +++g+v ++++ y++la+a
  KHJ35266.1 170 ILLSTILSSLRNGFEPELLGYNSTFAFFIVIMEIALLKLGCYLLSISNDSQLLDLVAYSGYKFVGTIVTLLVSRIfnhnhGTGGWVGWIIFSYTFLANA 268
                 ***********************************************99************************997887778899************** PP

        YIF1 193 fFllrsLklvllpeas.......etvkksqrkkrkqflflvaavlQlllmllLt 239
                 +FllrsLk+vllpe+        +tv+++q+++r+ flf++++ +Qll+m++Lt
  KHJ35266.1 269 LFLLRSLKYVLLPEHPtdergtmHTVARAQKSRRTHFLFIYSYPVQLLIMWALT 322
                 **************99888888877**************************996 PP

>> Yip1  Yip1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.8   5.0   4.3e-08   0.00025      18     148 ..     153     271 ..     132     280 .. 0.69

  Alignments for each domain:
  == domain 1  score: 20.8 bits;  conditional E-value: 4.3e-08
        Yip1  18 ilrapdlallllalltlllgllaslnlgqtlasgeevqgltlssllga.iiggylglllgllllalllhliakllggkgsfkqtlsvvgyallPlilga 115
                   ++pd++++l+al+t++l+  + + l++ ++++       l+ + ++ +++++++ ++ l l  +ll +      ++  + ++++ +gy ++ +i+ +
  KHJ35266.1 153 DINSPDMYIPLMALVTYILLSTILSSLRNGFEPE-------LLGYNSTfAFFIVIMEIALLKLGCYLLSI-----SNDSQLLDLVAYSGYKFVGTIVTL 239
                 5679********************9999999999.......44444442333333334445555555555.....5566766666666666******** PP

        Yip1 116 liaillllllgtllllvgllaliWslvllylgl 148
                 l++ ++    gt ++ vg++++ +++ + +l+l
  KHJ35266.1 240 LVSRIFNHNHGT-GGWVGWIIFSYTFLANALFL 271
                 **9998776665.55555555555555555554 PP

>> DUF4107  Protein of unknown function (DUF4107)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   1.4    0.0017        10     117     145 ..      39      67 ..       7      76 .. 0.74
   2 ?    4.1   0.0    0.0078        47       4      35 ..     226     255 ..     223     263 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0017
     DUF4107 117 pyagyGmynnpfepfdpkiGGsnwyhyGk 145
                 p      y+np++p  p +G s +  yG+
  KHJ35266.1  39 PLPQSSNYGNPYQPQVPSVGTSTFGGYGN 67 
                 444557899**************999995 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.0078
     DUF4107   4 alysgykivdklsGGavsktldknkGkivGav 35 
                 a ysgyk v  +    vs+ +++n+G  +G+v
  KHJ35266.1 226 A-YSGYKFVGTIVTLLVSRIFNHNHGT-GGWV 255
                 5.*********************9885.4443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (324 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       551  (0.0307323); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2372.15
//
Query:       KHJ35267.1  [L=594]
Description: putative srp54-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-51  174.4   0.0    3.9e-51  173.5   0.0    1.5  1  SRP54            SRP54-type protein, GTPase domain
    2.5e-50  172.1   2.2    4.1e-50  171.4   2.2    1.3  1  SRP-alpha_N      Signal recognition particle, alpha subunit, 
    1.1e-07   31.9   0.4    3.2e-07   30.5   0.1    2.0  1  SRP54_N          SRP54-type protein, helical bundle domain
    3.3e-07   29.5   0.0    6.1e-07   28.7   0.0    1.3  1  MeaB             Methylmalonyl Co-A mutase-associated GTPase 
    0.00038   20.5   0.0     0.0046   17.0   0.0    2.6  2  CbiA             CobQ/CobB/MinD/ParA nucleotide binding domai
     0.0015   19.0   0.0      0.012   16.0   0.0    2.2  2  AAA_16           AAA ATPase domain
     0.0018   18.1   0.0     0.0034   17.1   0.0    1.4  1  AAA_30           AAA domain
     0.0019   18.2   0.8      0.016   15.1   0.1    2.6  2  AAA_31           AAA domain
     0.0029   17.4   0.0     0.0069   16.1   0.0    1.6  1  AAA_24           AAA domain
     0.0073   15.9   0.1      0.015   14.9   0.1    1.5  1  cobW             CobW/HypB/UreG, nucleotide-binding domain
  ------ inclusion threshold ------
      0.014   14.6   0.3        1.7    7.8   0.2    2.4  2  ArsA_ATPase      Anion-transporting ATPase
      0.015   14.8   0.1      0.034   13.6   0.1    1.6  1  Fer4_NifH        4Fe-4S iron sulfur cluster binding proteins,
      0.024   14.7   0.7       0.19   11.8   0.7    2.4  1  MMR_HSR1         50S ribosome-binding GTPase
      0.027   14.7   0.0       0.15   12.3   0.0    2.3  2  AAA_22           AAA domain
      0.043   13.9   0.2        9.7    6.3   0.0    3.0  2  TPK_catalytic    Thiamin pyrophosphokinase, catalytic domain
      0.043   13.8   0.9       0.12   12.4   0.0    2.1  2  AAA_14           AAA domain
      0.047   13.6   0.1       0.16   11.9   0.1    2.0  1  NTPase_1         NTPase
      0.068   12.9   0.2       0.33   10.7   0.0    2.0  2  ATP_bind_1       Conserved hypothetical ATP binding protein
      0.094   13.2   0.4        0.3   11.6   0.0    2.1  2  ABC_tran         ABC transporter
       0.11   12.6   0.1         17    5.5   0.1    2.4  2  Lysine_decarbox  Possible lysine decarboxylase
       0.14   12.6   0.8        2.8    8.4   0.0    3.0  2  AAA              ATPase family associated with various cellul
        1.5    8.8   6.2        4.6    7.3   1.7    2.6  2  DUF87            Helicase HerA, central domain


Domain annotation for each model (and alignments):
>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  173.5   0.0   4.7e-54   3.9e-51       2     195 ..     384     591 ..     383     592 .. 0.92

  Alignments for each domain:
  == domain 1  score: 173.5 bits;  conditional E-value: 4.7e-54
                 EEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEEESTSSTTHHHHHHHHHHHTT.........EEEEESSTTSCHHHHHHHHHHHHHHTTSSEEEEEE CS
       SRP54   2 nvillvGlqGaGKTttlaKLaallkkegkkvllvaaDtfRaaAveQLktlaeklg.........vpvikkkeeadpaavakeavekakeekidvvlvDT 91 
                  +i +vG++G+GK t+l+K+   l k++ kvl+va+DtfR +AveQL+++ ++l+         v++++k  ++d+a+va++av+ a ++ +dvvl+DT
  KHJ35267.1 384 YIISIVGVNGVGKSTSLSKICYFLLKNKLKVLVVACDTFRSGAVEQLAVHVRNLKelsdreggfVELYQKGYGKDAANVARDAVKFATQNTFDVVLIDT 482
                 57899**********************************************997644455555678888999*************************** PP

                 --SSTTHHHHHHHHHHHHHHHSSSEEEEEEETTBHTHHHHHHHHHHHHSS....CSEEEEESTTSSS.STTHHHHHHHHHTS-EEEEE-SSSTTGEEE- CS
       SRP54  92 aGrlqndkelmeelkkikkvvkpdevllvldattgqeavkqakaFkeavg....itgviltklDgda.kgGaalsiaaelklPikfigvGekiedleef 185
                 aGr +ndk+lm+ l+k++k+++pd++l+v +a++g + v+qa++F+++ g    ++g+i++k+D+     G+++s+++++++P+ f+gvG+++ dl++ 
  KHJ35267.1 483 AGRRHNDKRLMSSLEKFAKFANPDKILMVGEALVGTDSVAQARNFNSSFGkgrtLDGFIISKCDTVGdMVGTLVSMVHATNVPVLFVGVGQHYSDLRNL 581
                 *********************************************9987444449*********975168***************************** PP

                 -HHHHHHHHH CS
       SRP54 186 dperlvsrll 195
                 + ++ v++ll
  KHJ35267.1 582 SVRWAVESLL 591
                 *******998 PP

>> SRP-alpha_N  Signal recognition particle, alpha subunit, N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.4   2.2     5e-53   4.1e-50      37     290 ..       2     250 ..       1     251 [. 0.80

  Alignments for each domain:
  == domain 1  score: 171.4 bits;  conditional E-value: 5e-53
                  ETTTTEEEEEE-BTTB--CHHHHHHHHHHHHHHHHHGGGGG.SS-S----TT..HHHHHHHHHHHHXXXXXXXXX........XXX..XXXXXXXXXX CS
  SRP-alpha_N  37 dnelgLvFVavYqkiLhLsYvDkLLdnvkteFvdlYkpklk.pkttlvecaksyFdeyFdqllrelEasaeaakkskaakepkamksfeeskkskktv 133
                  ++elgL+FVavY+++LhLs+vDkL+dn+k +Fv+lY+++l+ p++ +++  +  FdeyFdq+l++lE  +e++  + +++  +++ks+ e+   ++++
   KHJ35267.1   2 VKELGLIFVAVYRSLLHLSWVDKLVDNIKIIFVQLYGEQLQkPHVIVITS-N--FDEYFDQQLQNLEVLEENS--TIHQTRFENTKSYSEKYDFSESN 94 
                  89***************************************666666655.5..***************9876..44555667778888888888888 PP

                  .....XX.XX..............XXXXXXX...XXXXXXXXXX.XXXXXXX.XXX.XXXXXXXXXXXXXX..XXXXXXXXXXX....XXXXXXX..X CS
  SRP-alpha_N 134 ksskedkkpe...gkkkkgakkekdasddstpsatpetsrpstp.sglltakeagptaedvsrrarkkankkrssagassgdeakasksskkkkkkpk 227
                  +  +e+++ +     ++k+++ +k +s ds+p+ tp +sr+stp ++ +t+k + p  ++ srr rk+a++++     +         ++++k+ k++
   KHJ35267.1  95 SYLNEPAQIPslfDGEYKSHEPKKAKSYDSSPTITPISSRSSTPaGHIVTGK-SVP-SGKSSRRTRKSAKSSA----IN--------ITDDSKSVKNR 178
                  777666655578844444444444458999**************66688877.666.89*******8887332....22........22233444557 PP

                  XXXXXXXXXXXXX..XXXXXXXXXXXXXX..XXXX.XX......XXXXXXXXXXXXXX.XXXXXXXXXXXXX CS
  SRP-alpha_N 228 kkgkkaRvWdadg..sadeedkLDySapadesgae.ae......aveavdastwgsktdkgefvlkdlddee 290
                  + +kk+R+Wd+     +++++ LDySa  +e++ e ++      + ++v++++wgskt++g+fvlkdld+++
   KHJ35267.1 179 AVTKKGRKWDELDlfDSSNDKHLDYSALPNEDSIEiNNlgeqagTLKDVENDHWGSKTSSGKFVLKDLDEQV 250
                  8999*******9644567788******98888877666******999**********************976 PP

>> SRP54_N  SRP54-type protein, helical bundle domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.5   0.1   3.9e-10   3.2e-07       5      72 ..     278     344 ..     275     347 .. 0.89

  Alignments for each domain:
  == domain 1  score: 30.5 bits;  conditional E-value: 3.9e-10
                 HHHHHHHHCCSSCGHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHCTTSS-HHHHHHHHHH CS
     SRP54_N   5 lnsalkklsgkskideedleealkeleeaLleaDVgvkvvkklienvkkkavgekklkpkqqvkkivk 72 
                 + ++l+++ g++ +++edle ++k +e +Ll+++V+ ++v +l+e v+++ +g  k+ + +++++ ++
  KHJ35267.1 278 IGGLLRNFIGGKILTKEDLEKTIKGMEYHLLKKNVARETVVRLCEGVERELIG-VKTGNFESIQSKIR 344
                 6788999999*************************************999999.77788888887766 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.7   0.0   7.5e-10   6.1e-07      29     132 ..     383     485 ..     378     500 .. 0.86

  Alignments for each domain:
  == domain 1  score: 28.7 bits;  conditional E-value: 7.5e-10
                 SEEEEEEE-TTSSHHHHHHHHHHHHHCTT--EEEEEE-----------..------.-HCCCTSTTEEEEEE-----HHHHHHHHHHHHHHHHHTT-SE CS
        MeaB  29 aqvvGltGvPGaGkstlvealglelrrrGkrvavlavDPsspftGGsi..lGDklR.leelavdegvfiRslpsrGalGGlaaktrevvllleaaGfDv 124
                    + + Gv G+Gkst ++++   l ++  +v v+a D    f  G++  l  ++R l+el+  eg f+  l  +G    +a+ +r++v++     fDv
  KHJ35267.1 383 PYIISIVGVNGVGKSTSLSKICYFLLKNKLKVLVVACDT---FRSGAVeqLAVHVRnLKELSDREGGFVE-LYQKGYGKDAANVARDAVKFATQNTFDV 477
                 567899*******************************95...5556654466666658899999***996.6678999999****************** PP

                 EEEEEESS CS
        MeaB 125 vlietvGv 132
                 vli+t G 
  KHJ35267.1 478 VLIDTAGR 485
                 *****995 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.2     1e+03      54     104 ..     229     303 ..      55     326 .. 0.64
   2 !   17.0   0.0   5.7e-06    0.0046       9      55 ..     393     509 ..     386     591 .. 0.62

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.2
                 H...................CCHCCCHHHHHHCHCHHHH............EEEEEEEEESS...-TTCHHHHHHHHHHC CS
                 x...................xxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA  54 p...................dlkrllellealgkkkall..........lkiagvvlnrvdgeneetllkealeelkqry 104
                 +                    ++++l ++++ +   +++          l+ +g +l  + g   + l ke+le++++ +
  KHJ35267.1 229 NdhwgsktssgkfvlkdldeQVSSILASARTSQ---NHKessngimassLDAIGGLLRNFIGG--KILTKEDLEKTIKGM 303
                 155555444444444432222222222222222...222233555555644444444444444..466666666666544 PP

  == domain 2  score: 17.0 bits;  conditional E-value: 5.7e-06
                 TSSHHHHHHHHHHHHHHTT--EEEEEEEESSCCCCHHTTEB-HHHH..................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..................................................... RF
        CbiA   9 GvGKTtlaanLaralarrglrVllvDaDpqannlaileglendiep..................................................... 54 
                 GvGK+t + +++  l +++l+Vl+v +D+ ++ +   e+l   +++                                                     
  KHJ35267.1 393 GVGKSTSLSKICYFLLKNKLKVLVVACDTFRSGAV--EQLAVHVRNlkelsdreggfvelyqkgygkdaanvardavkfatqntfdvvlidtagrrhnd 489
                 9***************************9744332..33333333355566666666666666666655555555555555555555555555555555 PP

                 ...................C CS
                 ...................x RF
        CbiA  55 ...................d 55 
                                     
  KHJ35267.1 490 krlmsslekfakfanpdkiL 509
                 55555555555555555550 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.3   0.0       1.5   1.2e+03      45      80 ..      38      65 ..      33     101 .. 0.76
   2 !   16.0   0.0   1.5e-05     0.012      19     132 ..     378     505 ..     364     515 .. 0.60

  Alignments for each domain:
  == domain 1  score: -0.3 bits;  conditional E-value: 1.5
      AAA_16 45 lralekdggiflrgkcdqlesaipysalaqalaree 80
                 ++l+k ++i+++ ++d++        + q+l + e
  KHJ35267.1 38 GEQLQKPHVIVITSNFDEY--------FDQQLQNLE 65
                5788888999999999999........555554433 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 1.5e-05
      AAA_16  19 vrsgrpelvllsGesGvGKsslvrellralekdggiflrgkcdqlesaipysalaqalareellrqllde..............aesaeleawreklee 103
                 +  +rp ++ ++G  GvGKs+ + ++   l k++  +l   cd ++s+      +++la +    ++l++              +++a++++++ k+ +
  KHJ35267.1 378 LPNSRPYIISIVGVNGVGKSTSLSKICYFLLKNKLKVLVVACDTFRSG-----AVEQLAVHVRNLKELSDreggfvelyqkgygKDAANVARDAVKFAT 471
                 55678899*******************99***9999999999999444.....5565533333333333323333333333554444444444444444 PP

      AAA_16 104 ala.....avpelagaea....srllellkrllallsr 132
                 + +     +    + a++    +rl   l ++++++ +
  KHJ35267.1 472 QNTfdvvlI----DTAGRrhndKRLMSSLEKFAKFANP 505
                 444533332....2222244447777777777766665 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   4.2e-06    0.0034      21     124 ..     386     513 ..     379     526 .. 0.88

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 4.2e-06
      AAA_30  21 avltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLaeelgieastiakllkrlk......................grarlepg.tllivDE 96 
                   ++G+ G GK+t+l+++   + +++ +v+++A     + +++ +l ++ +++++l +r +                      +  + ++  +++++D 
  KHJ35267.1 386 ISIVGVNGVGKSTSLSKICYFLLKNKLKVLVVACDTFRSGAVE-QLAVHVRNLKELSDREGgfvelyqkgygkdaanvardavK-FATQNTfDVVLIDT 482
                 5699*****************************9999998888.8899999999999888899999999999999999998843.4555567******* PP

      AAA_30  97 agmv..dtkqlaallkaaekag.akvilvGD 124
                 ag    d + + +l k a+ a+  k+++vG 
  KHJ35267.1 483 AGRRhnDKRLMSSLEKFAKFANpDKILMVGE 513
                 **88779999999999999988899*99996 PP

>> AAA_31  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.1     2e-05     0.016      12      40 ..     393     421 ..     384     440 .. 0.85
   2 ?   -0.1   0.0      0.96   7.8e+02     114     125 ..     471     482 ..     439     486 .. 0.75

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 2e-05
      AAA_31  12 GvGKTTtsvnlaaalaklgkkvLlvDlDp 40 
                 GvGK+T+  +++++l k++ kvL+v +D+
  KHJ35267.1 393 GVGKSTSLSKICYFLLKNKLKVLVVACDT 421
                 8*************************997 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.96
      AAA_31 114 vkdeYDyiiiDc 125
                  ++++D+++iD+
  KHJ35267.1 471 TQNTFDVVLIDT 482
                 5678*******8 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0   8.5e-06    0.0069       3      75 ..     384     484 ..     382     497 .. 0.69

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 8.5e-06
      AAA_24   3 lkiliyGpsgiGKTtlakel.......gpkplfi........................dtekGlksldadkfpdieswedfldevvelaaeladyktlv 70 
                 + i i+G +g+GK+t+++++       + k+l++                        d e+G+ +l+ + +   +  +++  ++v++ a +++++++ 
  KHJ35267.1 384 YIISIVGVNGVGKSTSLSKIcyfllknKLKVLVVacdtfrsgaveqlavhvrnlkelsDREGGFVELYQKGYG--KDAANVARDAVKF-ATQNTFDVVL 479
                 6789****************99998776666666665555555555555555555555555555555555554..3344444444444.56678***** PP

      AAA_24  71 iDtid 75 
                 iDt++
  KHJ35267.1 480 IDTAG 484
                 ***87 PP

>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1   1.8e-05     0.015       3     156 ..     386     551 ..     384     565 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 1.8e-05
                 EEEEESTTCCHHHHHHHHH..CT--SS-EEEEESS-SS.CHCCCCCCHCCCT.EEEET..TTTECCHCTT-HHHHHHHHHHHH......TT-SEEEEEE CS
        cobW   3 tvltGflGsGKTtLlnhll..enraglklavivNefge.vsiDaellretgveivele..nGciCctlredllkelealeere......erldviliEt 90 
                 + ++G  G GK+t l++++    +++lk+ v+  +     ++++  ++ ++  + el+  +G+     ++   k +++++++       + +dv+li t
  KHJ35267.1 386 ISIVGVNGVGKSTSLSKICyfLLKNKLKVLVVACDTFRsGAVEQLAVHVRN--LKELSdrEGGFVELYQKGYGKDAANVARDAvkfatqNTFDVVLIDT 482
                 6799***************99888899999999887652566666665554..34443115666666666666666666666666666669******** PP

                 CT.TTTHHHHHTTSHHHHHCCCECEEEEEEETTTH.CCHCCHHHHHHHHHHTS...SEEEEE-HHHHCHC CS
        cobW  91 tG.laePapvafteeelksdltldavvavvDaknleaeeekieekaedqlaaa...dllvlnKtDlldee 156
                  G   + + ++ + e++++ ++ d +++v +a  + +++  +++++++ + +    d ++++K+D++ + 
  KHJ35267.1 483 AGrRHNDKRLMSSLEKFAKFANPDKILMVGEA-LVGTDSVAQARNFNSSFGKGrtlDGFIISKCDTVGDM 551
                 **666666667779999999999999999888.44566777777777776544222889******99876 PP

>> ArsA_ATPase  Anion-transporting ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   0.2    0.0021       1.7       3      38 ..     385     420 ..     384     425 .. 0.92
   2 ?    4.4   0.0     0.022        18     114     135 ..     464     485 ..     431     509 .. 0.81

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.0021
                  EEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEE-S CS
  ArsA_ATPase   3 vilvgGKGGVGKttvsaatavklsekgkkvllistD 38 
                  +i + G  GVGK+t+ + + + l +++ kvl+++ D
   KHJ35267.1 385 IISIVGVNGVGKSTSLSKICYFLLKNKLKVLVVACD 420
                  57788999*************************998 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.022
                  HHHHHHHHCSSSSEEEEESBSC CS
  ArsA_ATPase 114 eellkyvkeeeydvvvlDtaPT 135
                     +k+ +++++dvv++Dta  
   KHJ35267.1 464 RDAVKFATQNTFDVVLIDTAGR 485
                  56789999***********965 PP

>> Fer4_NifH  4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   4.2e-05     0.034       3      38 ..     386     421 ..     384     435 .. 0.93

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 4.2e-05
   Fer4_NifH   3 iaiyGkGGiGksttsqnlsaalaemgkkvlivGCDP 38 
                 i+i G  G+Gkst+++ +   l ++  kvl+v CD 
  KHJ35267.1 386 ISIVGVNGVGKSTSLSKICYFLLKNKLKVLVVACDT 421
                 8899******************************95 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.7   0.00023      0.19       2      84 ..     386     513 ..     385     536 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00023
                 EEEEESTTSSHHHHHHHHH.....TS..TEEESSSTTSSSSEEEEEEEETTEE......................................EEEEECGG CS
    MMR_HSR1   2 vaivGrpNvGKStLinalt.....ge..kaivsdkpgtTrdinegrvklkgke......................................ielvDtpG 55 
                 + ivG   vGKSt +++++     ++  +  v+   +    +++  v++++ +                                      ++l+Dt+G
  KHJ35267.1 386 ISIVGVNGVGKSTSLSKICyfllkNKlkVLVVACDTFRSGAVEQLAVHVRNLKelsdreggfvelyqkgygkdaanvardavkfatqntfdVVLIDTAG 484
                 789***************9555542231234455556666666666664442235666677777788888888888888888888888888******** PP

                 CSSHHHHHH...HHHHHHHHHHCTSEEEEEEE CS
    MMR_HSR1  56 liegaseek...glgkaflaleeadlillvvd 84 
                      +++k   +  ++f++  + d il+v +
  KHJ35267.1 485 -R--RHNDKrlmSSLEKFAKFANPDKILMVGE 513
                 .3..3444412344444444444577777655 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00019      0.15       5      71 ..     383     455 ..     380     523 .. 0.58
   2 ?   -1.8   0.0       4.4   3.6e+03     107     130 ..     550     571 ..     539     575 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00019
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldeeakaeeerpevvfvtlpsstsskdllrellralglelka..........e 71 
                  +i+ ++G  G+GK+t+l ++ + l + +     ++ vv ++   s+  ++l+ ++ +  +l+  +          +
  KHJ35267.1 383 PYIISIVGVNGVGKSTSLSKICYFLLKNK----LKVLVVACDTFRSGAVEQLAVHVRNLKELSDREggfvelyqkgY 455
                 6899****************999986443....35555566666666555555555444444444444455544443 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 4.4
      AAA_22 107 ealeeLrsllnlsrkgvqliLvGt 130
                 +++ +L+s++    ++v++++vG 
  KHJ35267.1 550 DMVGTLVSMVH--ATNVPVLFVGV 571
                 78889999999..*********96 PP

>> TPK_catalytic  Thiamin pyrophosphokinase, catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.3   0.0     0.012       9.7      75     110 ..      34      69 ..      17      78 .. 0.79
   2 ?    4.1   0.0     0.057        46      33      59 ..     329     355 ..     294     359 .. 0.86

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.012
  TPK_catalytic  75 lvlekekedknksivvlgalggRfDhtlaninvllk 110
                    + l  e+ +k++ iv++  + + fD+ l+n++vl +
     KHJ35267.1  34 VQLYGEQLQKPHVIVITSNFDEYFDQQLQNLEVLEE 69 
                    4444455677999*******************9975 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.057
  TPK_catalytic  33 pdvivGDlDSirpevkefyeskgteiv 59 
                    + v +G ++Si+++++  +es+ t+i+
     KHJ35267.1 329 IGVKTGNFESIQSKIRAAMESSLTKIL 355
                    45669****************999987 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.3       3.3   2.7e+03      21      50 ..      35      65 ..      27      90 .. 0.58
   2 ?   12.4   0.0   0.00015      0.12       4      47 ..     385     428 ..     382     455 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 3.3
      AAA_14 21 qlikellvkkesilyi..nldderdkkladpe 50
                ql+ e+l +k +++ i  n+d+  d++l++ e
  KHJ35267.1 35 QLYGEQL-QKPHVIVItsNFDEYFDQQLQNLE 65
                5566666.555555553367777777666654 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 0.00015
      AAA_14   4 ilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkla 47 
                 i+ i+G+  vGK+t l ++ + ll +k ++l +++d+ r  + +
  KHJ35267.1 385 IISIVGVNGVGKSTSLSKICYFLLKNKLKVLVVACDTFRSGAVE 428
                 899*****************999999999*****9998775444 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.1    0.0002      0.16       2      42 ..     386     426 ..     385     493 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.0002
                 EEEE--TTSSHHHHHHHHHHHH...GGGEEEEEEEEE---- CS
    NTPase_1   2 vfiTGppGvGKtTlvkkvlellkssgvkvgGfyteevregg 42 
                 + i G  GvGK+T ++k++  l ++ +kv  + +   r+g 
  KHJ35267.1 386 ISIVGVNGVGKSTSLSKICYFLLKNKLKVLVVACDTFRSGA 426
                 56889************************999999999664 PP

>> ATP_bind_1  Conserved hypothetical ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.1       1.1   8.8e+02     154     206 ..      40      95 ..      20     115 .. 0.67
   2 ?   10.7   0.0    0.0004      0.33       1      98 [.     388     482 ..     388     504 .. 0.75

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 1.1
  ATP_bind_1 154 rlelPhvvvl.nkfDllkeklekeleffedvealslllekee..ekykklaeaiae 206
                 +l+ Phv+v+ ++fD   +++ ++le++e+  +++++  +++     k+ +++  +
  KHJ35267.1  40 QLQKPHVIVItSNFDEYFDQQLQNLEVLEENSTIHQTRFENTksYSEKYDFSESNS 95 
                 56778876652689988877888899888887776654444333223344444444 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.0004
  ATP_bind_1   1 vvGpaGsGKttfvgalseilelrgrsvavvNLDPAaeelpYeaavdirelitledvmed.lglgpngalvvaleflresldwldeelekeeddyllfDt 98 
                 +vG+ G+GK+t  +++  +l +++ +v vv  D+  +    + av +r+l +l d +    +l ++g    a+++ r+ + +++ +      d +l+Dt
  KHJ35267.1 388 IVGVNGVGKSTSLSKICYFLLKNKLKVLVVACDTFRSGAVEQLAVHVRNLKELSDREGGfVELYQKGYGKDAANVARDAV-KFATQN---TFDVVLIDT 482
                 79****************************99986666655677777777777776666666666666666666666666.333333...336666666 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.2       7.3   5.9e+03      79      79 ..     183     183 ..     127     273 .. 0.52
   2 ?   11.6   0.0   0.00037       0.3      13      34 ..     385     406 ..     381     505 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 7.3
                 H CS
                 x RF
    ABC_tran  79 n 79 
                 +
  KHJ35267.1 183 K 183
                 2 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 0.00037
                 EEEEEESTTSSHHHHHHHHTTS CS
                 xxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  13 kvaivGenGaGKStLlkllagl 34 
                 ++ ivG nG GKSt l+ ++  
  KHJ35267.1 385 IISIVGVNGVGKSTSLSKICYF 406
                 689***********99988765 PP

>> Lysine_decarbox  Possible lysine decarboxylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   0.1     0.021        17      79     121 ..      42      83 ..      30      92 .. 0.76
   2 ?    4.4   0.0     0.047        38      74     101 ..     554     581 ..     549     593 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.021
                      TSS-S.EEEEEEGGGCCHHHHHHHHHHHHTTSS-GGGGGCEEE CS
  Lysine_decarbox  79 gkhqkvPiillnpkgyydkllefletlveegtisekareliiv 121
                      +k +   +i  n ++y+d+ l+ le l+e+ ti+++  e  ++
       KHJ35267.1  42 QKPHV-IVITSNFDEYFDQQLQNLEVLEENSTIHQTRFENTKS 83 
                      33333.466779999*******************998876555 PP

  == domain 2  score: 4.4 bits;  conditional E-value: 0.047
                      HHHHTTSS-S.EEEEEEGGGCCHHHHHH CS
  Lysine_decarbox  74 tliqlgkhqkvPiillnpkgyydkllef 101
                      tl+++ + ++vP+ ++++ ++y+ l ++
       KHJ35267.1 554 TLVSMVHATNVPVLFVGVGQHYSDLRNL 581
                      67778888899*************9886 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.4   0.0       0.5   4.1e+02      20      74 ..       3      60 ..       1      81 [. 0.68
   2 ?    8.4   0.0    0.0034       2.8       3      67 ..     388     483 ..     386     513 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.4 bits;  conditional E-value: 0.5
                HHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHHHHTS..TSEEEEE.ETGGGHHHHH CS
         AAA 20 kelgvefleisgsellskyvgesekkirelfkeakeka..kpsilfi.DEidalaksr 74
                kelg  f+ +  s l  ++v +  ++i+ +f ++  ++  kp++++i  ++d+ + ++
  KHJ35267.1  3 KELGLIFVAVYRSLLHLSWVDKLVDNIKIIFVQLYGEQlqKPHVIVItSNFDEYFDQQ 60
                5666666777677677789999999999999997555556885555515677776666 PP

  == domain 2  score: 8.4 bits;  conditional E-value: 0.0034
                 EESSTTSSHHHHHHHHHHHH...THEEEEEETTTCSSS.............................STTHHHHHHHHHHHHHHHTSTSEEEEEETG CS
         AAA   3 lyGppGtGKTllakavakel...gvefleisgsellsk.............................yvgesekkirelfkeakekakpsilfiDEi 67 
                 ++G  G+GK++  + ++  l   + ++l + + +++s                              y +++++  r+ +k a ++    +++iD +
  KHJ35267.1 388 IVGVNGVGKSTSLSKICYFLlknKLKVLVVACDTFRSGaveqlavhvrnlkelsdreggfvelyqkgYGKDAANVARDAVKFATQNT-FDVVLIDTA 483
                 78***************9987767999999999999776777777777777777777777777666555555555566666665554.677777765 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.9   0.2      0.12        97      85     193 ..     187     300 ..     107     309 .. 0.74
   2 ?    7.3   1.7    0.0056       4.6      27      57 ..     387     416 ..     386     417 .. 0.94

  Alignments for each domain:
  == domain 1  score: 2.9 bits;  conditional E-value: 0.12
       DUF87  85 a.......kdkelkinpwsldpeelldlleeddkpaaavqrsvleealdqakakeekeklssdepveklleelk..kekeelrklknqaiarlldkled 174
                 +       + +  ++++++l  e+ +++      ++a ++++v ++ + +   k++ +k+  ++++e++ + l   ++++++++++n ++a+ ld++  
  KHJ35267.1 187 WdeldlfdSSNDKHLDYSALPNEDSIEINNL--GEQAGTLKDVENDHWGS---KTSSGKFVLKDLDEQVSSILAsaRTSQNHKESSNGIMASSLDAIGG 280
                 2444555445566899999999999999999..99999999999999993...3788888888888888888886656666666777666666666666 PP

       DUF87 175 llrk..ggsfsnsstdliall 193
                 llr+  gg+ + +++dl++++
  KHJ35267.1 281 LLRNfiGGK-ILTKEDLEKTI 300
                 655311333.35666666665 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0056
       DUF87  27 AilgsTGsGKSntvavLleellekkgatili 57 
                  i+g  G+GKS+  + ++  ll k+++++l+
  KHJ35267.1 387 SIVGVNGVGKSTSLSKICYFLL-KNKLKVLV 416
                 699*******************.******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (594 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       784  (0.043728); expected 358.6 (0.02)
Passed bias filter:                      501  (0.0279436); expected 358.6 (0.02)
Passed Vit filter:                        73  (0.00407162); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 0.66u 0.29s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 4012.75
//
Query:       KHJ35268.1  [L=974]
Description: putative glycoside hydrolase family 3 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-48  165.9   0.0    2.3e-48  164.9   0.0    1.6  1  Glyco_hydro_3_C  Glycosyl hydrolase family 3 C-terminal domai
      1e-39  136.8   0.0    1.6e-39  136.2   0.0    1.3  1  Glyco_hydro_3    Glycosyl hydrolase family 3 N terminal domai
    2.2e-21   75.7   0.0    4.7e-21   74.7   0.0    1.6  1  Fn3-like         Fibronectin type III-like domain


Domain annotation for each model (and alignments):
>> Glyco_hydro_3_C  Glycosyl hydrolase family 3 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.9   0.0   3.8e-52   2.3e-48       1     204 []     507     772 ..     507     772 .. 0.88

  Alignments for each domain:
  == domain 1  score: 164.9 bits;  conditional E-value: 3.8e-52
                      -EEEEEGSS--S-S-STE.......EEEEESGGGS...............SS-SS-BSSS----S---HHHHHHHHHHH.............-H CS
                      xxxxxxxxxxxxxxxxxx.......xxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........xxx RF
  Glyco_hydro_3_C   1 iVLLkNennlLPLkkklk.......kiaviGpnad...............etlklGggsgtvtvsylvsplegirerles...........eeg 61 
                      +VLLkN  ++LPL+++++       +i ++G++                 +tl +G+gsg+v+++yl+sp ++++++l++           + +
       KHJ35268.1 507 TVLLKNS-GILPLNPNYSpenniklRIGIFGEDSSsgkgpnfcedrgcnqGTLGSGWGSGSVEFPYLISPADALKKALDKdkfnitvfpnnTLS 599
                      59****9.*****77777789999*******99999******************************************88*********98778 PP

                      HHHHHHHHHHTSEEEEEEEES...SB-TT........SCSGHHSSTTHHHHHHHHH....HTTSSEEEEEEESSGG--TTT.GTTTEEEEEE-S CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx RF
  Glyco_hydro_3_C  62 ideaveaakeaDvavvvvgedpeiegEgv........Drtdlalpeaqdelikava....aanknvvvvlqsggpvavepw.keenvkAilaaw 142
                      ++  +++ k++D+++v++++d   +gEg+        Dr++l l+++ delik va    ++n  ++vv++s gpv +e++ ++ n+kAi++a 
       KHJ35268.1 600 SNTTTSILKDQDICIVFASAD---SGEGYityngntgDRNNLFLQNGGDELIKGVAnscgDSNGDTIVVIHSVGPVIMESFvHHSNIKAIIWAN 690
                      899999***************...8888888888888*******************666656688*****************999********* PP

                      --GCCHHHHHHHHHTTSS---B--SS-EESSSGGG..............................S.-----SETTTT-BCH CS
                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx..xxxxxx.xx...............xx.xxxxxxxxxxxxxxx RF
  Glyco_hydro_3_C 143 lpGqegGtaiadvLfGdvnPsGkLpvtfpksledl.pd..dyyeek.dt...............yk.fegtplYpeGlglsY 204
                      lpGqe+G+a++dvL+G+vnPsGkLp+++ ksled+ p     y+++                   + ++ +p+Yp+G+glsY
       KHJ35268.1 691 LPGQESGNALTDVLLGKVNPSGKLPYSIGKSLEDYgPGakVLYNSSlTVpqltfeeglyidyrhFErYDIKPTYPFGFGLSY 772
                      ***********************************87764344444511456777888888544222445566999999999 PP

>> Glyco_hydro_3  Glycosyl hydrolase family 3 N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.2   0.0   2.6e-43   1.6e-39      64     317 ..     184     436 ..     141     438 .. 0.88

  Alignments for each domain:
  == domain 1  score: 136.2 bits;  conditional E-value: 2.6e-43
                    ..S--EEEE---BTTB---SSS.---S-HHHHHHHT-HHHHHHHHHHHHHHHHHHT--EE---B--.---STTSSSGGGSS-SSHHHHHHHHHHHH CS
  Glyco_hydro_3  64 lgiPlllavDqegGlvqrlgeg.tlfPsalalaatssldlikelgriiakelralgididfaPvvd.vnrdprngigvrsFsedpelvaalaaamv 157
                    +g P l   D   G++  ++++ t fP+ +  +at++++l+++ g++++ke+r  g+++ ++P v  ++r p+ g++ ++F++dp l +  aa+++
     KHJ35268.1 184 AGFPSLALQDGPLGIR--FSDNiTAFPAGITTGATWNKQLMYARGKAMGKEARMKGVNVLLGPCVGpLGRMPAGGRNWEGFGADPVLQGIAAAETI 277
                    5778888888888888..99999****************************************99659**************************** PP

                    HHHHHTT-EEEEEEETTGTT....-SSETTTS..EEB----HHHHHHTTHHHHHHHHHTT-SEEEE---B-TTT---BGGG-HHHHIIIIIIIS-- CS
  Glyco_hydro_3 158 kGlqgagvaatvKHFpghGd....gavdshke..lptvdhseeelrevdlvpfqaaieagvdsVMtaHvqfpaldgtpatgskklltdvLRkelGF 247
                    +G+q++gv+atvKHF g  +       ++h +     v+++ + l+e +  pfq+ i+ gv sVM +   ++ ++++ a  ++kl+ + L++elGF
     KHJ35268.1 278 RGIQEEGVMATVKHFVGNEQehyrQRFETHNNeyALSVNIDDRTLHELYGWPFQNTIKVGVASVMCS---YQMVNNSYACQNSKLINGYLKDELGF 370
                    *****************743111134566654214568899**************************...************************** PP

                    -SEEEES-TTSHHHHCCS-HHHHHHHHHHHT-SBEES-S---SG......HHHHHHHHHTTSS-HHHHHHHHHHHH CS
  Glyco_hydro_3 248 dGvvvsDalamkeiadrggkeeavvlaLkAGvDilLvpeertse......ikalkkavkeGeltearidesvrrvl 317
                     G+v sD+            ++  v++  AG+D+++  +            ++l k++ +G+++ +r+++ v+rv+
     KHJ35268.1 371 SGFVQSDWA----------AQDSGVASALAGLDMSMPGDGLRMGdgkpfwGQELTKSIFNGSVPIERLNDMVTRVV 436
                    ********9..........44445555569******9999987799999889**********************97 PP

>> Fn3-like  Fibronectin type III-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.7   0.0   7.9e-25   4.7e-21       1      71 []     888     965 ..     888     965 .. 0.92

  Alignments for each domain:
  == domain 1  score: 74.7 bits;  conditional E-value: 7.9e-25
                 EEEEEEEEESS......-STTSBS-EEEEEEEEEE-TT-EEEEEEEEECGGG-EEETTTTEEE--SCE.EEEEEESSS CS
    Fn3-like   1 evvqlYvsdpe......ssverpvkeLkgFekveLapGesktvtftldrkdlsvwdeekqkwvvepGe.ytvlvgtss 71 
                 ev+qlYvs+++      + ++ p k+L++Fekv+L  Ge+kt++f l+r+dls+wd+ kq+wv+++G  +t+lvg+ss
  KHJ35268.1 888 EVAQLYVSFEDveindsEDIDFPIKVLRQFEKVDLDVGETKTIQFHLTRRDLSYWDVIKQNWVMPTGGcITLLVGASS 965
                 8*******98865665457**********************************************86659******98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (974 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       444  (0.0247643); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.71u 0.26s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 6830.79
//
Query:       KHJ35269.1  [L=237]
Description: putative rnase p rpr2 rpp21 subunit domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-22   79.8   0.0    3.6e-22   78.5   0.0    1.8  1  Rpr2      RNAse P Rpr2/Rpp21/SNM1 subunit domain


Domain annotation for each model (and alignments):
>> Rpr2  RNAse P Rpr2/Rpp21/SNM1 subunit domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.5   0.0     2e-26   3.6e-22       1      89 [.      23     201 ..      23     202 .. 0.95

  Alignments for each domain:
  == domain 1  score: 78.5 bits;  conditional E-value: 2e-26
                 HHHHHHHHHH......................................................................................... CS
        Rpr2   1 rlnfLyqaahl........................................................................................ 11 
                 r++fLyqaa +                                                                                        
  KHJ35269.1  23 RVSFLYQAAVYlatinnrhhcclknedkqenpensgeemqededkktgtnaitaaavvqgtevlvgsdvkydisdnargegkkkgilnprtdlkatqgl 121
                 899************************************************************************************************ PP

                 ....HHHHH-HHHHHHHHHHHHHHHHHCT---SSTCCCTB-TTT--B--CTTTEEEEEE-SSS-E.........EEEEETTT CS
        Rpr2  12 ....qlaeaspalsrylakqlrevskkaqlrlppsvkrtvCkkCgsvlipgvtcsvrvenkskkkkkkkkkadvlvvtClaC 89 
                      l +++   sr l+++lr++s kaq+rl+p++k ++Ck+C+++li g tcs ++enksk+  ++k++ad+lv +C +C
  KHJ35269.1 122 tssmDLTAPTIINSRKLISELRAISLKAQIRLSPHIKNSICKTCSTLLIDGTTCSNEIENKSKE--GRKPWADILVKRCYTC 201
                 9955444444555**********************************************98876..78************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (237 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       780  (0.0435049); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1750.96
//
Query:       KHJ35270.1  [L=1260]
Description: putative serine threonine-protein kinase gin4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.7e-69  233.5   0.1    4.6e-68  229.4   0.1    2.4  1  Pkinase         Protein kinase domain
    7.2e-36  122.5   0.8    1.8e-35  121.2   0.3    2.0  2  Fungal_KA1      Fungal kinase associated-1 domain
    5.6e-35  120.9   0.0    3.9e-34  118.1   0.0    2.2  1  Pkinase_Tyr     Protein tyrosine kinase
    9.1e-08   31.8   0.0    2.6e-07   30.3   0.0    1.8  2  Kinase-like     Kinase-like
     0.0062   15.9   0.0      0.016   14.5   0.0    1.6  1  Kdo             Lipopolysaccharide kinase (Kdo/WaaP) family
  ------ inclusion threshold ------
      0.012   15.2   1.0      0.033   13.8   0.1    2.2  2  Choline_kinase  Choline/ethanolamine kinase
      0.033   14.1   0.0      0.059   13.3   0.0    1.4  1  APH             Phosphotransferase enzyme family
      0.055   13.1   0.0       0.18   11.5   0.0    1.8  1  DUF4264         Protein of unknown function (DUF4264)
       0.13   12.5   0.6       0.37   11.0   0.4    1.9  1  zinc_ribbon_13  Nucleic-acid-binding protein containing Zn-ri


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  229.4   0.1   2.3e-71   4.6e-68       3     263 ..     122     400 ..     120     401 .. 0.91

  Alignments for each domain:
  == domain 1  score: 229.4 bits;  conditional E-value: 2.3e-71
                 EEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHH........................HHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEE CS
     Pkinase   3 kleklGeGsfGkVykaveketgkivAvKkikkekakkkke........................kkvlrEikilkklkhpnivrlyevfeekdelylvl 77 
                   ++lG+Gs+++V  a+++ tg+  AvK++ k  a+ ++                           + rE++i+k ++hpni++ly+++e+ +e+yl+l
  KHJ35270.1 122 LGKTLGRGSSARVRLARHQITGQVAAVKIVPKIGAQISQSgslanfekaesrlhnhddglkhmpVGIEREVAIMKLIQHPNILKLYDIWENRKEIYLCL 220
                 6799**************************998777766677888999999999**999988777799******************************* PP

                 E--TTEBHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHHTTSCB. CS
     Pkinase  78 eyveggeladllerkgslseeeakkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvlkeney. 174
                 eyv++gel++ + ++g l+eeea  +++qil+++ey+Hs +i+HrDlKpeNiL+ ++g++Ki+DFG+a+  +   + l++ +g+++Y APE++++++y 
  KHJ35270.1 221 EYVDNGELFEQIAQNGRLKEEEAMGYFRQILSAVEYCHSFNICHRDLKPENILLTSSGQIKIADFGMAALHQAPGQqLSTSCGSPHYAAPELIRGSKYh 319
                 ********************************************************************998877666****************777777 PP

                 SHHHHHHHHHHHHHHHHHSS-STTTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGG CS
     Pkinase 175 skkvDvWslGvilyelltgkppfsgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpy 263
                 ++ vD+Ws+Gvil+  l+g+ pf +e  ++    e         + + +k +++ + ++s+e+k+l++++l+ +pk+R+t +++ +hp 
  KHJ35270.1 320 GNMVDIWSMGVILFAALAGRLPFDAEGVSK----EWLA----PLLAKIKKGQYNMPANFSPEVKSLIRSMLQINPKDRITLSQIWKHPL 400
                 ************************443333....3333....233335677999*********************************97 PP

>> Fungal_KA1  Fungal kinase associated-1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0       4.3   8.5e+03      90     112 ..     796     821 ..     764     822 .. 0.64
   2 !  121.2   0.3   9.1e-39   1.8e-35       2     118 .]    1119    1239 ..    1118    1239 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 4.3
  Fungal_KA1  90 ftkekGsass...frklvkeiekvlr 112
                 ++++ G ++s   +++lv +i+k l+
  KHJ35270.1 796 IRRKAGGNESssyLNQLVAHIDKLLQ 821
                 44444433221337888888888876 PP

  == domain 2  score: 121.2 bits;  conditional E-value: 9.1e-39
  Fungal_KA1    2 kqnwFarlfsvksatkvlktslskkelrqelaklLreWkkyGlkdvksdkesntitgkvsseNilslksvkFeieiisvseh....klSlvrftkek 94  
                  ++nw arlf+vk+  + +++s++kk++  e+  lLreW+++G++ +++dk++++i+g+v+ eN+l++k+v F+ e+++v+eh     lS++r t+e 
  KHJ35270.1 1119 QRNWWARLFKVKPVIRFICFSIPKKKALLEILGLLREWRRFGIEGIQVDKSRSIIFGQVGVENYLQIKNVGFATEFMTVIEHgkrsALSIARWTQEH 1215
                  89*********************************************************************************************** PP

  Fungal_KA1   95 GsassfrklvkeiekvlrkegvLv 118 
                  G+assf+k+v++iekvl+++++Lv
  KHJ35270.1 1216 GAASSFHKVVDTIEKVLKERNMLV 1239
                  *********************996 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.1   0.0   1.9e-37   3.9e-34      48     257 ..     188     397 ..     120     398 .. 0.88

  Alignments for each domain:
  == domain 1  score: 118.1 bits;  conditional E-value: 1.9e-37
                  HHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE- CS
  Pkinase_Tyr  48 lleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkis 145
                  + +e++imk ++hpni+kl+ +  +++++++ +eyv++G+L + + ++   +l+ ++ + +  q+ +++ey +s ++ Hrdl   N+Ll+++ ++ki+
   KHJ35270.1 188 IEREVAIMKLIQHPNILKLYDIWENRKEIYLCLEYVDNGELFEQIAQN--GRLKEEEAMGYFRQILSAVEYCHSFNICHRDLKPENILLTSSGQIKIA 283
                  568********************************************9..9*********************************************** PP

                  STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEE.HHHHHHHHHHHHHHHHTTSSGTTTTS..HHHHHHHHH..HTTEES-BBTTSBHHHHHHH CS
  Pkinase_Tyr 146 DfGLardiekddeyvkkeeaklpvkWmapEslkekkft.sksDvWsfGvllwEiftlgespypgl..kneevlekl..kegkrlekpekcpeelyelm 238
                  DfG+a  + +   ++ ++ +  + ++ apE ++ +k+     D+Ws Gv+l+  +  g+ p+     ++e ++  l   ++ + ++p++ ++e+++l+
   KHJ35270.1 284 DFGMAALH-QAPGQQLST-SCGSPHYAAPELIRGSKYHgNMVDIWSMGVILFAALA-GRLPFDAEgvSKEWLAPLLakIKKGQYNMPANFSPEVKSLI 378
                  ******99.444444444.445668***********973568**********9999.**998654415555555554445667999************ PP

                  HHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 239 kkcweedpeeRptfselve 257
                  ++ ++ +p++R t+s++ +
   KHJ35270.1 379 RSMLQINPKDRITLSQIWK 397
                  ***************9965 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.3   0.0   1.3e-10   2.6e-07     152     288 .]     249     389 ..     223     389 .. 0.83
   2 ?   -3.5   0.1       2.5     5e+03      47      81 ..     973    1007 ..     964    1010 .. 0.83

  Alignments for each domain:
  == domain 1  score: 30.3 bits;  conditional E-value: 1.3e-10
  Kinase-like 152 qlirlaanLqakglvhgkftvdnllldekgglmlggft..aLvragtkvvlseve..kgfaPpEllgsrggytrknktkmthkldaWqlGlviyriwc 245
                  q++  + + ++  + h +++++n+ll   g++++ +f+  aL +a  +   s+ +    +a pEl+    +y+          +d W +G+  +   +
   KHJ35270.1 249 QILSAVEYCHSFNICHRDLKPENILLTSSGQIKIADFGmaALHQAPGQQL-STSCgsPHYAAPELIRG-SKYHG-------NMVDIWSMGVILFAALA 337
                  445568889999***********************997336777644443.444444899****9865.34555.......458************** PP

  Kinase-like 246 lklPltlateeakeew...........kfklckkipekvkaLlkkfLqlsqedR 288
                    lP++  +e++++ew           +++  ++ + +vk L++ +Lq + +dR
   KHJ35270.1 338 GRLPFD--AEGVSKEWlapllakikkgQYNMPANFSPEVKSLIRSMLQINPKDR 389
                  *****7..79****************99**********************9998 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 2.5
  Kinase-like   47 lpseaskkdlerlkeqelairllrgknpeqAkdhl 81  
                    + ++ ++ +++ k+++ +  +l + +p  Ak+ l
   KHJ35270.1  973 AKIDPVSQRYKQAKKDVYLNDHLNKYSPFSAKRNL 1007
                   444899999*************9999999999865 PP

>> Kdo  Lipopolysaccharide kinase (Kdo/WaaP) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.5   0.0   8.2e-06     0.016     108     169 ..     232     288 ..     215     297 .. 0.76

  Alignments for each domain:
  == domain 1  score: 14.5 bits;  conditional E-value: 8.2e-06
         Kdo 108 llakwaelaeelkrallkavgrliaklhragvnHadlyaknillqqeeeeeaeiwliDldka 169
                 ++++  +l+ee     ++++  +++  h+ +++H+dl + nill   +    +i + D+  a
  KHJ35270.1 232 IAQN-GRLKEEEAMGYFRQILSAVEYCHSFNICHRDLKPENILLTSSG----QIKIADFGMA 288
                 4443.44667777778899999***********************999....6777777655 PP

>> Choline_kinase  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.1   1.6e-05     0.033     131     174 ..     244     288 ..     195     293 .. 0.77
   2 ?   -2.1   0.1       1.2   2.3e+03      38     116 ..     471     544 ..     450     563 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.6e-05
                     HHTHHHHHHCHGG-..EEEE-S--SGGGEEE.-CTTEEEE--GTT- CS
  Choline_kinase 131 lekleklleelesp..vvfcHnDlqegNillnkeekklvlIDFEYa 174
                     +  ++++l+  e+    + cH Dl ++Nill ++ +++ + DF  a
      KHJ35270.1 244 MGYFRQILSAVEYChsFNICHRDLKPENILL-TSSGQIKIADFGMA 288
                     4455666654443334899************.999********665 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.2
                     -EEEEETTEEEEE--TCEE--TTGGGCHHHHHHHHHHHHHHTTCHH..TTSSSS-HHHHHHHHHHHCCS.TT..ECHHGG CS
  Choline_kinase  38 klygifenGrieefiesrtlstedlrepeiskkiAkklaelHslel.eseskespslwktmqkwllnkeaqtkakkekkk 116
                      l++ f +  +e++++  + s  d  +  +  k  + l + H +++ e+  +++ s ++ +++      a+ +++  ++k
      KHJ35270.1 471 ALLVKFRDTQLENYVPDIRYSISDYHH-VNPVKLTRTLSTCHFSQPgERRHNRTISKFTVIKNN-----AKNEQSYTSSK 544
                     577778888888888888888877666.455566777888887777312222222223333333.....33333333333 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0     3e-05     0.059     167     197 ..     261     289 ..     173     293 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3e-05
                 EEE-SS-SGGGEEEC..TTEEEEE---TT-E CS
         APH 167 vllHgDlhpgNllvdpddgrvtGviDfedag 197
                  ++H+Dl+p N+l++   g++  + Df++a 
  KHJ35270.1 261 NICHRDLKPENILLT-SSGQI-KIADFGMAA 289
                 59*************.44555.599999985 PP

>> DUF4264  Protein of unknown function (DUF4264)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0     9e-05      0.18      13      46 ..    1218    1249 ..    1211    1252 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 9e-05
     DUF4264   13 nddlYkvVDfLNktLKdkdlmFGLskdkkkekmv 46  
                   + ++kvVD++ k LK++++++ + +  k + mv
  KHJ35270.1 1218 ASSFHKVVDTIEKVLKERNMLVAIEQ--KRNMMV 1249
                  56789*****************9999..666776 PP

>> zinc_ribbon_13  Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.4   0.00019      0.37      19      52 ..    1056    1089 ..    1051    1098 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00019
  zinc_ribbon_13   19 GsglskifdvqnkkfitvsCknCgYtelYkaets 52  
                      G gl k+f  q+ k  +  C+n gY +lY+++t 
      KHJ35270.1 1056 GFGLGKFFKKQHYKLDMMFCNNHGYDDLYDNTTV 1089
                      6789*************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1260 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      378  (0.0210832); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.83u 0.27s 00:00:01.10 Elapsed: 00:00:00.44
# Mc/sec: 8542.55
//
Query:       KHJ35271.1  [L=468]
Description: putative glycoside hydrolase family 16 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-17   63.1   1.0    3.6e-17   62.4   1.0    1.3  1  Glyco_hydro_16  Glycosyl hydrolases family 16


Domain annotation for each model (and alignments):
>> Glyco_hydro_16  Glycosyl hydrolases family 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.4   1.0     2e-21   3.6e-17      28     162 ..     213     386 ..     161     399 .. 0.75

  Alignments for each domain:
  == domain 1  score: 62.4 bits;  conditional E-value: 2e-21
                     E............EEEEEEEE..CCEESSEEEEEEEE---STTEEEEEEE..ETGG...TSTTEEEEE.EEETT-TTE.......EEEEEEBTTB CS
  Glyco_hydro_16  28 k............esgsriks..kksflyGkvearikaaksaGvvtafyl..ssed...ekahdEiDi.EflGndtgk.......vqtnvygkGk 95 
                                   +++ri++  + +++yG+ve+++k+++++ +++a+++   + +   ++a++EiDi E  Gn+ +        v++++++  +
      KHJ35271.1 213 TitnltegtivqpVKSGRINTkqSARIKYGRVEVTAKLPSGDWLWPAIWMlpVNATygmWPASGEIDImESRGNNHTYaqggnnvVSSTLHWGPD 307
                     0444445666666779*****7777899**********************764533579***************998888999999999998777 PP

                     SGE.......EEEEETSS-TTTS-EEEEEEEETTEEEEEETTEEEEEEESSHHHHT.....--EESEEEE.EEEEEEBS CS
  Glyco_hydro_16  96 gkr.......ekrlslwfdptedfHtYaieWtpdkikfyVDgkpvrtltkkeaeev...k.yPqftpmkv.avslwpgs 162
                      ++       +kr sl    ++  Ht+++eW++++i  y+D ++ ++l+++ +e     + +P + +  + ++s w  +
      KHJ35271.1 308 IANdawwrtnSKRTSLHTTYAKTEHTFGLEWSQKYIFTYIDTVLLQVLYTNFNEPLyarGlFPLSDVNVTkMISDWSRT 386
                     66445666779999999*****************************999887662223323576444333134466555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       597  (0.033298); expected 358.6 (0.02)
Passed bias filter:                      454  (0.0253221); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.54u 0.20s 00:00:00.74 Elapsed: 00:00:00.38
# Mc/sec: 3690.16
//
Query:       KHJ35272.1  [L=611]
Description: putative aldehyde dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.3e-121  406.4   0.0   1.6e-121  406.1   0.0    1.0  1  Aldedh    Aldehyde dehydrogenase family


Domain annotation for each model (and alignments):
>> Aldedh  Aldehyde dehydrogenase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  406.1   0.0  8.9e-126  1.6e-121       5     462 .]      80     553 ..      77     553 .. 0.97

  Alignments for each domain:
  == domain 1  score: 406.1 bits;  conditional E-value: 8.9e-126
                 SSSE.EEEEETTTCEEEEEEE-B-HHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTHHHHHHHHHHHH---HHHHHH.HHHHHHHHHHHHH CS
      Aldedh   5 eset.ievinPatgeviakvpaataedvdaavaaAkeafkawaklpaeeRaeiLrkaadlleerkeelaeletletGkplaeara.eveeaidvlryya 101
                 e++t i+++ Patg  ++ v+  +++ +d+a+++A+ea+k w+k++++eR+++Lr +++++ + ++e+ ++ +++ Gk++ +a+  e+  +++ l++++
  KHJ35272.1  80 EGSTaIQCYAPATGLFLGFVNPQSPDSIDRAISRAQEAQKIWSKTNFSERKKVLRCIQAYIIKYQKEICKVACIDSGKTMIDATLgEILVTVEKLNWTC 178
                 45455******************************************************************************999************* PP

                 HHHHH.HSEEEEEEC...TTEEEEEEEEE-SEEEEEE-SSSCCHHHHHHHHHHHHTT-EEEEEE-TTSHHHHHHHHHHHHHT....TS-TTSEEE--SS CS
      Aldedh 102 elaek.legevlpss...egklalvrrePlGvvgaItPWNfPlllaawklapalaaGNtvvlKPaeetplsalllaelfeea....glPkgvlnvvtgs 192
                  + ek l  +  p++   + k+++vr+ePlGvv+a+++WN+P++ +++ ++ a+ +GN +++K +e t++sa++++++++ea    g  +++++ v+  
  KHJ35272.1 179 LHGEKaLIPSKRPTNflmAYKRNYVRYEPLGVVAALVSWNYPFHNLIGPIISAIFTGNGIIVKVSEHTAWSATYFTRIVKEAlqvcGHNPQLVQTVVA- 276
                 *****76667777766889***************************************************************9999**********99. PP

                 TCCHHHHHHH-TTESEEEEES-HHHHHHHHHHHHCTTSEEEEEE---EEEEE-TTS..HHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHH CS
      Aldedh 193 gsevgealvehpevdkvsftGstevgrkiakaaaknlkrvtlElGGknplivleda..DldkaveaivkgafgnaGQvCiaasrllvqesiydefvekl 289
                   +++++l++hp++ +++f+Gs++v++ +a++aa++l++v++ElGGk+++ivl++a  Dl++  + +++g+f  aGQ+Ci ++r++   ++yd ++e+l
  KHJ35272.1 277 WPQTANYLTSHPGISHITFIGSRPVAKLVAASAANSLTPVVAELGGKDAAIVLDSAksDLNRITKILLRGCFQAAGQNCIGIERIIACPQVYDLLIEAL 375
                 6789****************************************************999**************************************** PP

                 HHHHHT--BS-TTS....TT-SB---SSHHHHHHHHHHHHHHHHTTSEEEE-TT.E.SB-SSSTTEE--EEEES-TTTSHHHHS---SSEEEEEEESSH CS
      Aldedh 290 veaakklkvgdpld....edtdvGPliseaqlekvekyveeakeegaklllGge.reeaglekgyfvePtvlanvtpdmriaqeEiFGPVlsvikfkde 383
                 +  +k+++vg++ld    e+ d+G++is a ++k+e+++++a++ ga+ll+Gg+  +++   +g+++ePt+l +vt+dm+ia+eE+FGP+ +++++kd 
  KHJ35272.1 376 APCIKSIRVGSALDsssgEEIDMGAMISDACFDKLESLIQTAVKGGARLLVGGSrFKHPVHVNGHYFEPTLLVDVTSDMEIANEECFGPICVLMRAKDA 474
                 ***********999888889**********************************9889***************************************** PP

                 HHHHHHHHSSSEESEEEEE-SBHHHHHHHHHHS-SSEEEESSSST--TTTSEB--CGGGEES-BSHHHHHHHTEEEEEE CS
      Aldedh 384 eeaieiaNdteyGLaagvftkdleraervaerleaGnvyiNdsttgaaealpfgGvkqSglGreggkegleeytevktv 462
                  ea e+aN+ ++GL+a+vf++  +++e+++++++ G+v +Nd +++ a +lpfgGv+ Sg+Gr++g+egl+  +++k++
  KHJ35272.1 475 VEACELANKPNFGLGASVFGTRDANIEYIIQNIKSGMVAVNDFAAYYAVQLPFGGVGGSGYGRFAGEEGLRGLCNIKAI 553
                 ***************************************************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (611 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.43
# Mc/sec: 4290.22
//
Query:       KHJ35273.1  [L=402]
Description: putative fasciclin domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.4e-41  139.2   0.1    2.7e-22   79.4   0.1    2.4  2  Fasciclin  Fasciclin domain


Domain annotation for each model (and alignments):
>> Fasciclin  Fasciclin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.4   0.0   9.2e-20   1.7e-15       2     128 .]      40     181 ..      39     181 .. 0.90
   2 !   79.4   0.1   1.5e-26   2.7e-22       4     128 .]     195     310 ..     193     310 .. 0.93

  Alignments for each domain:
  == domain 1  score: 57.4 bits;  conditional E-value: 9.2e-20
                 GGHHHHHHHHTT.TCCCCCTCSSSSEEEEEE-HHHHCCCHHHHHHHHHT..CHHHHHHHHHTTEEESSS-HHHHHHH..........HEEEECCTTSSE CS
   Fasciclin   2 dlstfvslleka.glaeeLnkkdgglTvFaPtneAfaklppellaklln..dkkklkeiLkyHvvpetvsssalkka..........setlatllegak 87 
                 +lstf+s++++  ++  +L  + +g+T++aP+neAf+k+p   l++ ++  dk+ ++++L+yH++ +t  +s+l  +          s ++++++ g++
  KHJ35273.1  40 KLSTFYSFIQEFpQVLLKL-PSYSGVTILAPNNEAFKKIPYTVLDEAFKnkDKEIVTSVLEYHIILGTKDASSLMPGkpiflptlltSAKWTNVSGGQR 137
                 6899*****9988999999.7779*****************99999999889999*******************9998999999888777888778887 PP

                 EEEEEEGGTTEEEETT...EEEEEEEEEEESSEEEEEESS-TSX CS
   Fasciclin  88 lrvniekgngtvtvng...karvvrsdieatngvihvidkvLlp 128
                 ++  ++ gn+ v+v g   +++++++d + t g + vi+++L+p
  KHJ35273.1 138 VQGVKQAGNAVVFVSGkgeRSTLTQPDLAFTGGKVQVINSILIP 181
                 7766667999********************************98 PP

  == domain 2  score: 79.4 bits;  conditional E-value: 1.5e-26
                 HHHHHHHHTTTCCCCCTCSSSSEEEEEE-HHHHCCCHHHHHHHHHTCHHHHHHHHHTTEEESSS-HHHHHHHHEEEECCTTSSEEEEEEEGGTTEEEET CS
   Fasciclin   4 stfvsllekaglaeeLnkkdgglTvFaPtneAfaklppellakllndkkklkeiLkyHvvpetvsssalkkasetlatllegaklrvniekgngtvtvn 102
                   f+ +l +++ ++ + +++ +lTvFaP+n+Af  ++p+  +    + ++l +++ yHv+pe v+s al ++ +++ t  +g+++++     ++t++vn
  KHJ35273.1 195 DSFQGALYASERVSDF-NDNPNLTVFAPNNQAFGVIGPAITSM---TIQELGSVMDYHVLPEIVYSTALINQ-SSFLT-KQGQEITIIHA--GNTIYVN 285
                 6789999999999***.6668************9999888887...689**********************9.99999.***********..9****** PP

                 TEEEEEEEEEEESSEEEEEESS-TSX CS
   Fasciclin 103 gkarvvrsdieatngvihvidkvLlp 128
                 + a++v++di  tngv+hvid+vL p
  KHJ35273.1 286 S-AQLVSTDILLTNGVLHVIDNVLNP 310
                 *.**********************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (402 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       604  (0.0336884); expected 358.6 (0.02)
Passed bias filter:                      462  (0.0257683); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 2939.18
//
Query:       KHJ35274.1  [L=134]
Description: hypothetical protein EV44_g3427 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (134 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.24s 00:00:00.61 Elapsed: 00:00:00.40
# Mc/sec: 1000.46
//
Query:       KHJ35275.1  [L=439]
Description: putative nucleotide-diphospho-sugar transferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (439 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       508  (0.028334); expected 358.6 (0.02)
Passed bias filter:                      370  (0.020637); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.19s 00:00:00.67 Elapsed: 00:00:00.35
# Mc/sec: 3726.65
//
Query:       KHJ35276.1  [L=441]
Description: putative glycosyltransferase family 2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.1e-50  172.4   1.2    1.1e-50  172.4   1.2    1.9  2  Glyco_trans_2_3  Glycosyl transferase family group 2
    1.1e-05   25.4   0.0    1.7e-05   24.7   0.0    1.3  1  Glycos_transf_2  Glycosyl transferase family 2
    2.5e-05   23.8   0.0    5.4e-05   22.7   0.0    1.5  1  Glyco_transf_21  Glycosyl transferase family 21
  ------ inclusion threshold ------
      0.019   14.9   0.0      0.037   13.9   0.0    1.5  1  Glyco_tranf_2_3  Glycosyltransferase like family 2


Domain annotation for each model (and alignments):
>> Glyco_trans_2_3  Glycosyl transferase family group 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.4   1.2   2.4e-54   1.1e-50       1     196 [.      58     263 ..      58     276 .. 0.79
   2 ?   -1.6   1.1      0.46   2.1e+03     152     177 ..     321     348 ..     272     423 .. 0.59

  Alignments for each domain:
  == domain 1  score: 172.4 bits;  conditional E-value: 2.4e-54
  Glyco_trans_2_3   1 iilllDaDtvlppdclreiaaela.spevaivqgpvlvmnv.anwleelaalffaedhgkdilvrealgrvvpsvGsgaflrrsalqevg.... 88 
                      +ill+D+Dt++p dcl+++++e++ spev+i+q+ ++vm+v ++++e+ ++ ff++ ++ +i  ++++g+ +p+vG++a+lr+salq+v+    
       KHJ35276.1  58 YILLVDSDTRVPSDCLLDACSEMEqSPEVGILQFSSGVMQVvNTYFENGIT-FFTNLIYTAIQYTVSNGDIAPFVGHNAILRWSALQSVSyide 150
                      79**********************66*************651666666666.66679999********************************** PP

  Glyco_trans_2_3  89 .....gwdgdessvsEDfdmglrlqrkGyrvrfvpes..lvkekspltlraalrQrkRwayGc.el.eklil.lvrll...gylgsllwsalpl 169
                           +w+  es+vsEDfdm+lrlq +Gy++r+++ +   ++e+++lt++++l++++++ayGc el ++ i+ ++ +     +++++l+s++ l
       KHJ35276.1 151 dnyekFWS--ESHVSEDFDMSLRLQCNGYTIRLATWTgrDFQEGVSLTVYDELARWEKYAYGCnELlFHPIRkWIYRGpftPLFWRFLASNIRL 242
                      ********..************************9998889*********************95334333321221112233445555555555 PP

  Glyco_trans_2_3 170 hlallllfsllalalvlllllllaall 196
                         ++++++      +  +++++aa++
       KHJ35276.1 243 TSKITIIAY------IGTYYAIGAAWI 263
                      555555555......444444444443 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.46
  Glyco_trans_2_3 152 lvrllgylgsllwsa..lplhlallllf 177
                      l+ ++++++ l+ +   l+lh+  +ll+
       KHJ35276.1 321 LLENIKWTFMLAIFLggLSLHVSQALLS 348
                      4444555444433221134444333433 PP

>> Glycos_transf_2  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.0   3.8e-09   1.7e-05      80     168 ..      56     144 ..      47     146 .. 0.97

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 3.8e-09
                      SSEEEEEESSEEE-TTHHHHHHHHHHH.TTCEEEEEEEEEECCCCCCCHC-SSEEEECCHCCCCHCCCCCCSTTCSTCCCEEEEHHHHH CS
  Glycos_transf_2  80 gdyilflDaDdepdpdwleklvealekdgadvvlgqrprifgetdeiernkrvgenerlyfkerkrslkgnlsfeigsaallrrealee 168
                      gdyil++D+D+ ++ d+l +   ++e+ ++ ++l+      +  +++  n  +++ + +y+ ++    +g+++ ++g++a+lr +al++
       KHJ35276.1  56 GDYILLVDSDTRVPSDCLLDACSEMEQSPEVGILQFSSGVMQVVNTYFENGITFFTNLIYTAIQYTVSNGDIAPFVGHNAILRWSALQS 144
                      89************************************************999******************************999986 PP

>> Glyco_transf_21  Glycosyl transferase family 21
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.7   0.0   1.2e-08   5.4e-05      32     149 ..      57     185 ..      52     207 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.7 bits;  conditional E-value: 1.2e-08
  Glyco_transf_21  32 dllvisDsdvrvkpdyLeellaaled.pkvglVtslpvgsdakglaaaleaafl.ntlagvlqa..klsglgfavGksmalrreaLeaiGGfea 121
                      d++++ Dsd+rv++d L + + ++e+ p+vg+++  + +++  + + +    f+ n  + ++q+  + + +   vG   +lr +aL++++ + +
       KHJ35276.1  57 DYILLVDSDTRVPSDCLLDACSEMEQsPEVGILQFSSGVMQVVNTYFENGITFFtNLIYTAIQYtvSNGDIAPFVGHNAILRWSALQSVSYIDE 150
                      89***********************99*********9999999999888888885555566666333479999****************98765 PP

  Glyco_transf_21 122 .....l..adeLAeDyalgkllraaGlkvvlspap 149
                           +    ++ eD+ ++ +l+ +G++++l++ +
       KHJ35276.1 151 dnyekFwsESHVSEDFDMSLRLQCNGYTIRLATWT 185
                      22222322568999999999999999999999865 PP

>> Glyco_tranf_2_3  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   8.2e-06     0.037      87     200 ..      54     178 ..      13     185 .. 0.66

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 8.2e-06
  Glyco_tranf_2_3  87 k.sdlvllvDdDtvvePdtlkrllqff.ltpkvgavgtpvflln.rstl............vsalgalefaerhlrflaarralgvltlnGsgs 165
                      + +d++llvD+Dt+v  d l  ++  + ++p+vg+++ +  +++  +t+             +a +++  + + + f  +   l+  +l  s s
       KHJ35276.1  54 RlGDYILLVDSDTRVPSDCLLDACSEMeQSPEVGILQFSSGVMQvVNTYfengitfftnliYTAIQYTVSNGDIAPFVGHNAILRWSALQ-SVS 146
                      3689***********6666666677777*********88877663444445555555444433333434444444555555555432222.555 PP

  Glyco_tranf_2_3 166 lirrevlkelegldplflltdDyelglrlrragfr 200
                       i+ + ++ +  + + +++ +D++++lrl  +g+ 
       KHJ35276.1 147 YIDEDNYEKF--WSE-SHVSEDFDMSLRLQCNGYT 178
                      6666666666..777.9999999999998887776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (441 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       553  (0.0308439); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 3383.64
//
Query:       KHJ35277.1  [L=593]
Description: putative c2h2 transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    0.00021   21.5   6.2     0.0011   19.1   0.4    2.3  2  zf-C2H2_aberr  Aberrant zinc-finger
  ------ inclusion threshold ------
      0.015   16.1  15.6        1.1   10.3   3.9    4.2  3  zf-C2H2_4      C2H2-type zinc finger
        2.1    9.0  17.8       0.18   12.3   0.8    3.7  3  zf-C2H2        Zinc finger, C2H2 type


Domain annotation for each model (and alignments):
>> zf-C2H2_aberr  Aberrant zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.1   0.4   1.9e-07    0.0011     123     174 ..     456     506 ..     437     507 .. 0.81
   2 !    4.7   1.0    0.0051        30     146     163 ..     538     555 ..     529     559 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.1 bits;  conditional E-value: 1.9e-07
  zf-C2H2_aberr 123 tifvngvikiiDidkkdliyCripGCgkrfkslmaYkYhckkflhslkelid 174
                     + +++   +i +++++ + C+++GC k +k+  + kYh k++ hs +++ d
     KHJ35277.1 456 LVHPHSNSMMITTEEHKPFRCPVIGCEKAYKNQNGLKYH-KTHGHSTQQIHD 506
                    556666666666677777*********************.678888888765 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0051
  zf-C2H2_aberr 146 pGCgkrfkslmaYkYhck 163
                      C kr+k+l + kYh +
     KHJ35277.1 538 DCCTKRYKNLNGLKYHKQ 555
                    56**************76 PP

>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   0.4     0.076   4.5e+02       6      24 .]     135     153 ..     132     153 .. 0.88
   2 ?    9.5   0.2   0.00032       1.9       1      23 [.     474     497 ..     474     498 .. 0.92
   3 ?   10.3   3.9   0.00019       1.1       1      20 [.     535     554 ..     535     557 .. 0.90

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.076
   zf-C2H2_4   6 CgksFsskkaLlrHlkthH 24 
                 Cg + +s ++Ll+H +t H
  KHJ35277.1 135 CGSTIPSLHDLLQHYETTH 153
                 899999********99977 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00032
   zf-C2H2_4   1 fkCpi..CgksFsskkaLlrHlkth 23 
                 f+Cp+  C k ++++++L+ H kth
  KHJ35277.1 474 FRCPVigCEKAYKNQNGLKYH-KTH 497
                 89*******************.655 PP

  == domain 3  score: 10.3 bits;  conditional E-value: 0.00019
   zf-C2H2_4   1 fkCpiCgksFsskkaLlrHl 20 
                 +kC+ C+k++++ ++L+ H 
  KHJ35277.1 535 YKCDCCTKRYKNLNGLKYHK 554
                 89*****************4 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.2      0.16   9.6e+02       6      23 .]     135     153 ..     135     153 .. 0.90
   2 ?   12.3   0.8     3e-05      0.18       1      23 []     474     499 ..     474     499 .. 0.92
   3 ?    2.9   5.3     0.029   1.7e+02       1      20 [.     535     554 ..     535     556 .. 0.93

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.16
                 TTEEESSHHHHHHHHHC.C CS
     zf-C2H2   6 CgksFkrksnLkrHirt.H 23 
                 Cg + ++ ++L +H+ t H
  KHJ35277.1 135 CGSTIPSLHDLLQHYETtH 153
                 88888999*******9988 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 3e-05
                 EEET..TTTEEESSHHHHHHHHHC.C CS
     zf-C2H2   1 ykCp..dCgksFkrksnLkrHirt.H 23 
                 ++Cp  +C k +k++  Lk H    H
  KHJ35277.1 474 FRCPviGCEKAYKNQNGLKYHKTHgH 499
                 89*******************87666 PP

  == domain 3  score: 2.9 bits;  conditional E-value: 0.029
                 EEETTTTEEESSHHHHHHHH CS
     zf-C2H2   1 ykCpdCgksFkrksnLkrHi 20 
                 ykC+ C+k++k+   Lk H 
  KHJ35277.1 535 YKCDCCTKRYKNLNGLKYHK 554
                 99*****************6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (593 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       530  (0.029561); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 4520.55
//
Query:       KHJ35278.1  [L=546]
Description: putative mrs7 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.8e-104  348.9   0.5   1.8e-104  348.9   0.5    1.8  2  LETM1     LETM1-like protein
    0.00013   21.6   0.0       0.01   15.5   0.0    3.2  3  SAP       SAP domain


Domain annotation for each model (and alignments):
>> LETM1  LETM1-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  348.9   0.5    2e-108  1.8e-104       2     268 .]     154     417 ..     153     417 .. 0.97
   2 ?   -2.5   1.5      0.29   2.6e+03     100     129 ..     464     492 ..     450     523 .. 0.62

  Alignments for each domain:
  == domain 1  score: 348.9 bits;  conditional E-value: 2e-108
       LETM1   2 fpkikkelkhyvkGtkllfadvkisvkllvkllkgkeLsrrEreqlkrttaDllrlvPfsvfiivPfaelllpvllklFPnlLpstFeskkqkeeklkk 100
                  +kikke++hy++Gtkll+a++kis+kl+ k+++g+eLsrrE++ql+rt++D+ rlvPfsvf++vPfaelllpv+lklFPn+Lpst+e +k+ke+k++ 
  KHJ35278.1 154 SQKIKKEAQHYWDGTKLLAAEIKISTKLALKMAAGYELSRRENKQLQRTVKDIARLVPFSVFVLVPFAELLLPVALKLFPNMLPSTYEGQKSKESKATT 252
                 689************************************************************************************************ PP

       LETM1 101 rlkarlevakfLqetlees.lkkkkkekkekaeelkeflkkvrsggepeevsneeilkvaklFkdeltLdnlsrkqlkalckllslqpfgtdnllryrl 198
                  + +r+ev++fL++tl+e+ l  + +  ++++ e+++f++k+r +g  e++s ee++kv++lFkd+ltLdnlsr+ql+ +c++++l++fgtd +lry++
  KHJ35278.1 253 LRVTRKEVSNFLRDTLKETgL--PLSPATARKGEFTQFFRKIRATG--ESPSPEEVIKVCTLFKDDLTLDNLSRPQLVGMCRYMNLNTFGTDMMLRYQI 347
                 ****************99953..444556799*************9..789************************************************ PP

       LETM1 199 rkklreikedDkaikreGvdsLseeeLqeacrsRGlraaglseeelreqLeqWlelslkkkvpsslLlLs 268
                 r+++r+ik+dD+ai+ eGv+sLs+ eLq ac+sRGlr++g+s+++lr++L+ Wl+l+lk+ vps+lL+Ls
  KHJ35278.1 348 RHRMRQIKRDDHAINFEGVESLSVPELQVACMSRGLRTHGVSPARLRDDLQSWLDLRLKHGVPSTLLVLS 417
                 ********************************************************************97 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.29
       LETM1 100 krlkarlevakfLqetleeslkkkkkekke 129
                  + k+rlev+k  qe +ee ++++ +++ke
  KHJ35278.1 464 ATNKQRLEVLKEQQELIEEENEQN-EDNKE 492
                 556778888888888887763222.22222 PP

>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.0     0.029   2.6e+02       9      21 ..     264     276 ..     264     277 .. 0.92
   2 ?   -0.2   0.0       0.1   9.1e+02       2      23 ..     318     339 ..     317     339 .. 0.88
   3 !   15.5   0.0   1.2e-06      0.01       2      22 ..     367     387 ..     366     398 .. 0.93

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.029
                 HHHHHHHTT--TT CS
         SAP   9 LKeeLkkrGLpts 21 
                 L++ Lk+ GLp s
  KHJ35278.1 264 LRDTLKETGLPLS 276
                 9*********976 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.1
                 TT--HHHHHHHHHHTT--TTS- CS
         SAP   2 skltVaeLKeeLkkrGLptsGk 23 
                  +l+ ++L   ++ ++L t G+
  KHJ35278.1 318 DNLSRPQLVGMCRYMNLNTFGT 339
                 68999********9**999886 PP

  == domain 3  score: 15.5 bits;  conditional E-value: 1.2e-06
                 TT--HHHHHHHHHHTT--TTS CS
         SAP   2 skltVaeLKeeLkkrGLptsG 22 
                 ++l+V+eL+ ++ +rGL+t G
  KHJ35278.1 367 ESLSVPELQVACMSRGLRTHG 387
                 69*****************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1408  (0.078532); expected 358.6 (0.02)
Passed bias filter:                      441  (0.024597); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.26s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 3775.73
//
Query:       KHJ35279.1  [L=468]
Description: putative sorting nexin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.5e-20   70.8   0.1    2.7e-19   69.2   0.1    1.9  2  PX        PX domain
    7.5e-11   42.0   1.8    3.7e-05   23.4   0.3    2.2  2  Vps5      Vps5 C terminal like
  ------ inclusion threshold ------
      0.027   13.4   0.1      0.027   13.4   0.1    2.0  2  Spc7      Spc7 kinetochore protein
      0.043   13.5   0.7       0.57    9.8   0.0    2.3  2  BAR       BAR domain


Domain annotation for each model (and alignments):
>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.2   0.1   5.9e-23   2.7e-19       3     112 ..      60     177 ..      58     178 .. 0.95
   2 ?   -2.9   0.0       1.5   6.7e+03      43      54 ..     334     345 ..     333     354 .. 0.63

  Alignments for each domain:
  == domain 1  score: 69.2 bits;  conditional E-value: 5.9e-23
                 EEEEEEEEEEEE.TTSSEEEEEEEEEETTS.....SSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSS...CTTSHHHHHHHHHHHHHHHH CS
          PX   3 laqvsvlerets.gskkhsyylyevelktg.....akewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsv...rkkdeefiekrrkgLeeyLq 92 
                 +++++v+ + ++  + k+ y+ y v++kt      + + +v+Rr+ dF+ L++ L r++p++ iPp P+k+++  +   +++ ++f+e+r ++L+++L 
  KHJ35279.1  60 IIECKVSQPIKEnDGTKDAYVSYVVTTKTTfvtfqKPTTSVRRRFTDFVFLYKTLSREYPTCAIPPVPEKNSLA-YvrgDRFGPDFTERRAHSLTRFLL 157
                 7899999*9999888999999*******99*****************************************997.5699******************** PP

                 HHHTSCHHHHSHHHHHHHHS CS
          PX  93 rllnhpelrnsevlteFLev 112
                 rl  hp lr+s  l  FLe+
  KHJ35279.1 158 RLTLHPILRRSALLIIFLES 177
                 ******************97 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 1.5
                 HHHHHHHHHHHH CS
          PX  43 dFeeLhskLlrk 54 
                 dFe+L ++L + 
  KHJ35279.1 334 DFEQLTEYLNKS 345
                 566666666554 PP

>> Vps5  Vps5 C terminal like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.1   4.1e-07    0.0018       4     132 ..     204     330 ..     202     351 .. 0.78
   2 !   23.4   0.3   8.2e-09   3.7e-05     145     234 ..     369     457 ..     361     459 .. 0.92

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 4.1e-07
        Vps5   4 lfkkltssisksstkfeEqDewFedkkqeldslesqLkkLykaiellvsqrkelasataelakslesLaslelskslsralsqla.eveerikellerq 101
                 +f++lt+++ ++ tk++ +D+ F+d +++ d+l++ L  ++k    +++   +l   +++l+   + L +le   +  +a  ++a e+e+  k l +  
  KHJ35279.1 204 VFDGLTDTFINAFTKIHKPDKRFIDVREKSDKLDEDLGYIEKIAARVSRREGDLEHDLKDLSDQYQLLTTLEPGVE--KAGTEFAtELEKMSKGLGALR 300
                 5778889999999*********************************************************996533..333344314455555555555 PP

        Vps5 102 aeqdvltLgetideylrligsvksvfeqRvk 132
                    d  +Lg  +++ l + ++vk++++ R +
  KHJ35279.1 301 RVWDHSYLGS-LRDMLAYSAAVKNLLKVREQ 330
                 5666777765.57777777777777777765 PP

  == domain 2  score: 23.4 bits;  conditional E-value: 8.2e-09
        Vps5 145 skkkeqleKlekaaksqqdklqqlkkeveelerkvqeaekeFeeisetikkElerFetervedfknvvekyLesaiesqkevielWetfl 234
                 ++k e++  l+++ +s++++l++l+  ++ l   v+ea+k  e   e++ +E++ Fe+ +  +fk  + +    +ie   ++i  We+f 
  KHJ35279.1 369 ARKIEDVRGLDHE-QSRKERLRKLELRIQALAGGVEEAKKISEAFDEEVVREVADFERIKRIEFKVQLSELADANIEFYSKMIGGWEAFS 457
                 5666666666666.8999**********************************************************************96 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.1   6.1e-06     0.027     137     241 ..     243     347 ..     240     356 .. 0.88
   2 ?   -0.3   0.6     0.088   3.9e+02     197     230 ..     384     417 ..     368     447 .. 0.48

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 6.1e-06
        Spc7 137 legLkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaeeles.idkeeLeelreelaelkaeieekkkelaelqeqleelee 234
                 +e++  +++++  +le+d + L++q ++l++l p +e+  +e   elek+ +    l    d+ +L +lr+ la  +a ++++ k  +++q + e+l+e
  KHJ35279.1 243 IEKIAARVSRREGDLEHDLKDLSDQYQLLTTLEPGVEKAGTEFATELEKMSKGLGALRRvWDHSYLGSLRDMLAY-SAAVKNLLKVREQKQLDFEQLTE 340
                 7889999999999***************************************8888888468*********9975.67788899999999999999999 PP

        Spc7 235 kieelke 241
                  +++ + 
  KHJ35279.1 341 YLNKSTG 347
                 9988765 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.088
        Spc7 197 dkeeLeelreelaelkaeieekkkelaelqeqle 230
                  ke+L++l  ++++l   +ee kk  +   e++ 
  KHJ35279.1 384 RKERLRKLELRIQALAGGVEEAKKISEAFDEEVV 417
                 3333333333333333333333332222222222 PP

>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00013      0.57     121     164 ..     305     347 ..     248     361 .. 0.85
   2 ?    1.8   0.1     0.036   1.6e+02     168     225 ..     387     448 ..     370     452 .. 0.73

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00013
         BAR 121 tnfldplrellekefkeiqkerkklehkrlDyDaakarlkklkt 164
                  + l  lr +l +++  +++ +k +e+k+lD+ + ++ l+k+  
  KHJ35279.1 305 HSYLGSLRDML-AYSAAVKNLLKVREQKQLDFEQLTEYLNKSTG 347
                 566788999**.*************************9999764 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.036
         BAR 168 kkakde...ekaeeelrkAqqkfeesneelkaeLpnllalevefv.nqlqafveaqldfhkq 225
                 + +k e   +++   +++A++  e + ee+ +e  ++   +   +  ql+++++a+++f+ +
  KHJ35279.1 387 RLRKLElriQALAGGVEEAKKISEAFDEEVVREVADFERIKRIEFkVQLSELADANIEFYSK 448
                 33333344566777889999999999999999999997655444449999999999999987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (468 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.24s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3326.45
//
Query:       KHJ35280.1  [L=1010]
Description: putative wd domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.2e-06   26.3  10.6       0.48   11.4   1.5    6.2  6  WD40      WD domain, G-beta repeat


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.1      0.32   5.8e+03      28      34 ..     172     177 ..     158     189 .. 0.63
   2 !   11.4   1.5   2.7e-05      0.48       5      37 ..     371     404 ..     367     405 .. 0.82
   3 !    5.3   0.0    0.0022        40      10      27 ..     556     577 ..     548     593 .. 0.82
   4 !    7.4   0.1   0.00048       8.6      27      38 .]     659     669 ..     633     669 .. 0.79
   5 ?    1.9   0.0     0.026   4.7e+02      13      28 ..     717     733 ..     705     740 .. 0.78
   6 ?   -2.8   0.0      0.84   1.5e+04      10      36 ..     858     879 ..     852     879 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.32
                 EETTSEE CS
        WD40  28 GsdDgtv 34 
                 +s +g+v
  KHJ35280.1 172 CS-NGSV 177
                 45.5544 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 2.7e-05
                 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS
        WD40   5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 
                  +l  H   v+ +++s dg++++sG++   + +W
  KHJ35280.1 371 SKLHWHrHAVHTVKWSLDGNYVISGGEETVLVLW 404
                 556667446*****************99999999 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.0022
                 SSS.....EEEEEEETTSSEEEE CS
        WD40  10 Hss.....vtslafspdgawlas 27 
                 H s     vt+l+ s dg wlas
  KHJ35280.1 556 H-SlfeprVTHLKISFDGLWLAS 577
                 6.223467*************86 PP

  == domain 4  score: 7.4 bits;  conditional E-value: 0.00048
                 EEETTSEEEEEE CS
        WD40  27 sGsdDgtvriWd 38 
                  Gs D+tv+iW+
  KHJ35280.1 659 IGS-DRTVKIWS 669
                 499.*******5 PP

  == domain 5  score: 1.9 bits;  conditional E-value: 0.026
                 EE.EEEEETTSSEEEEE CS
        WD40  13 vt.slafspdgawlasG 28 
                 vt +++fs dg+ la++
  KHJ35280.1 717 VTgCISFSEDGSVLAAA 733
                 743999*******9864 PP

  == domain 6  score: -2.8 bits;  conditional E-value: 0.84
                 S.SS..EEEEEEETTSSEE.EEEETTSEEEE CS
        WD40  10 H.ss..vtslafspdgawl.asGsdDgtvri 36 
                 H ++  +t+l        l a+Gs  g ++i
  KHJ35280.1 858 HlFPsiITAL--------LpATGS-EGYLMI 879
                 6655557999........889999.777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1010 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       681  (0.0379832); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.75u 0.29s 00:00:01.04 Elapsed: 00:00:00.45
# Mc/sec: 6735.10
//
Query:       KHJ35281.1  [L=264]
Description: putative adenylate kinase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.2e-36  123.2   0.0    1.2e-17   64.4   0.0    2.1  2  ADK       Adenylate kinase
    3.1e-13   49.4   0.0    5.6e-13   48.6   0.0    1.4  1  ADK_lid   Adenylate kinase, active site lid
    3.7e-13   50.1   0.0    6.3e-09   36.4   0.0    2.9  3  AAA_17    AAA domain
    0.00027   21.5   0.2     0.0096   16.5   0.0    2.8  3  AAA_18    AAA domain
  ------ inclusion threshold ------
       0.05   13.9   0.0      0.081   13.2   0.0    1.3  1  AAA_28    AAA domain
       0.11   12.7   0.0       0.81    9.8   0.0    2.3  3  AAA_33    AAA domain


Domain annotation for each model (and alignments):
>> ADK  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.4   0.0   3.9e-21   1.2e-17       2      70 ..      12      81 ..      11      86 .. 0.94
   2 !   56.8   0.0   8.6e-19   2.6e-15      68     150 ..     121     235 ..     105     236 .. 0.93

  Alignments for each domain:
  == domain 1  score: 64.4 bits;  conditional E-value: 3.9e-21
                EESTTSSHHHHHHHHHHHH.TSEEEEHHHHHHHHHHCT-HHHHHHHHHHHTTSS--HHHHHHHHHHHHHC CS
                xxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK  2 lGaPgaGKGtqaeklvkky.glahlstGdllRaevksgtelGkeakevmdkgelvpdevvvklvkeelek 70
                +GaPg GKGtq+++l+k+y +l  +s+Gd+lR+++k +t+lG ++++++ +g+lvpd+++++l+ +e++k
  KHJ35281.1 12 IGAPGVGKGTQTARLQKRYpQLSSISSGDILRDNIKDQTPLGVKVASTISAGQLVPDSLILSLIIHEFQK 81
                8******************67899****************************************998876 PP

  == domain 2  score: 56.8 bits;  conditional E-value: 8.6e-19
                 HHCH.GTTTEEEEESB-SSHHHHHHHHHHHHHHTSEESEEEEEE--HHHHHHHHHT....................................GSHHHHH CS
                 xxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................................xxxxxxx RF
         ADK  68 leke.dkkkgfllDGfPRtveqaealeelleeekvkldlvleldvpeevlveRltg....................................Dneetvk 129
                 l+++ d +  f+lDGfPR+++qa++l+e      + +++v++l+ p + ++eR+ g                                    Dn et +
  KHJ35281.1 121 LKNSyDSSISFILDGFPRSLDQAQMLNE-----LIPINFVVSLKTPISKIIERINGrwihapsgrtynstfkkpkvegidditgerltkredDNIETWE 214
                 5565588899******************.....68**************************************************************** PP

                 HHHHHHHHHHHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxx RF
         ADK 130 kRletykkqtkplidyykkkg 150
                 +Rl++++k+++pl++yy +kg
  KHJ35281.1 215 NRLKQFQKTSEPLLSYYAEKG 235
                 *****************9986 PP

>> ADK_lid  Adenylate kinase, active site lid
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.6   0.0   1.9e-16   5.6e-13       1      36 []     172     207 ..     172     207 .. 0.98

  Alignments for each domain:
  == domain 1  score: 48.6 bits;  conditional E-value: 1.9e-16
                 EEE-TTT--EEETTTB--SSTTB-TTT--.-B--GG CS
     ADK_lid   1 RrvCpkCGrsYhvvfnpPkveglCDkCGepLvqRsD 36 
                 R+++  +Gr+Y+ +f++Pkveg++D +Ge L++R+D
  KHJ35281.1 172 RWIHAPSGRTYNSTFKKPKVEGIDDITGERLTKRED 207
                 9***********999********************9 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.4   0.0   2.1e-12   6.3e-09       1      67 [.      12      81 ..      12      95 .. 0.88
   2 !    9.9   0.0   0.00032      0.96      70     129 ..     127     182 ..     110     187 .. 0.73
   3 ?   -0.2   0.1      0.41   1.2e+03     123     135 ..     201     213 ..     190     214 .. 0.76

  Alignments for each domain:
  == domain 1  score: 36.4 bits;  conditional E-value: 2.1e-12
                EE-TTSSHHHHHHHHHHHH.TEEEEEHHHHHHHHHHTTTS..HSSHHHHCTSHHHHHHHHHHHHHHHHHH CS
      AAA_17  1 lGgPGsGKgtqceklveky.gfthlsaGdllreeakrggl..akardemrklpleekkelqkeaaekiae 67
                +G PG+GKgtq ++l+++y +++ +s Gd+lr+++k++    +k  + ++ ++l+++  ++ +++ + ++
  KHJ35281.1 12 IGAPGVGKGTQTARLQKRYpQLSSISSGDILRDNIKDQTPlgVKVASTISAGQLVPDSLILSLIIHEFQK 81
                69*****************99*****************74368889999999999999988888776655 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.00032
                 HSSEEEEEE-SEEEETTEEEESSHHHHHHHH...SEEEEEE--HHHHHHHHHHH...TTST-TS CS
      AAA_17  70 kkkgvlvdghprikeqagfldglpkevleelkp.daiilleadpeeilerrlkd...rtrgrdd 129
                 ++  +++dg+pr  +qa++l        +el p ++++ l+++  +i+er   +     +gr++
  KHJ35281.1 127 SSISFILDGFPRSLDQAQML--------NELIPiNFVVSLKTPISKIIERINGRwihAPSGRTY 182
                 44469*******98877754........44444399999***********98885423477665 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.41
                 TTST-TS-SHHHH CS
      AAA_17 123 rtrgrdddneesi 135
                 r  +r+ddn+e++
  KHJ35281.1 201 RLTKREDDNIETW 213
                 44589******98 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   3.2e-06    0.0096       1      35 [.       9      49 ..       9      61 .. 0.83
   2 ?    0.5   0.0      0.27   8.1e+02      78     113 ..     132     172 ..     104     184 .. 0.71
   3 ?    0.1   0.2      0.36   1.1e+03     108     127 ..     200     219 ..     192     222 .. 0.83

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 3.2e-06
      AAA_18  1 IlltGtpGvGKttlakeLskrl.gf.....gvnlrdvaken 35
                I+  G+pGvGK t + +L+kr  ++     g++lrd++k+ 
  KHJ35281.1  9 IIFIGAPGVGKGTQTARLQKRYpQLssissGDILRDNIKDQ 49
                899******************65558778888888877765 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.27
      AAA_18  78 vidghlaeleseaakdikk.......vvLtaspeelleRlekR 113
                 ++dg++  l ++++            v L+++ ++ +eR++ R
  KHJ35281.1 132 ILDGFPRSLDQAQMLN--ElipinfvVSLKTPISKIIERINGR 172
                 6666665554444432..1235555799999999999999988 PP

  == domain 3  score: 0.1 bits;  conditional E-value: 0.36
      AAA_18 108 eRlekRgyeeakikeneeae 127
                 eRl kR+  + +++en+  +
  KHJ35281.1 200 ERLTKREDDNIETWENRLKQ 219
                 8******9999999998665 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   2.7e-05     0.081       1      26 [.       8      33 ..       8      63 .. 0.73

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 2.7e-05
      AAA_28  1 kivitGgestGKTtlleaLaargypv 26
                +i+++G+++ GK t +++L++r  + 
  KHJ35281.1  8 RIIFIGAPGVGKGTQTARLQKRYPQL 33
                79******************994443 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.0   0.00027      0.81       2      38 ..       9      47 ..       9      86 .. 0.77
   2 ?   -2.1   0.0       1.3   3.9e+03     101     118 ..     155     172 ..     142     180 .. 0.85
   3 ?   -0.6   0.0      0.45   1.4e+03     113     141 ..     200     225 ..     195     227 .. 0.69

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00027
      AAA_33  2 vllvGlpGsGKstlaerllkklg..avllssdtlrrrlf 38
                ++++G+pG+GK t   rl k+ +    + s d+lr++++
  KHJ35281.1  9 IIFIGAPGVGKGTQTARLQKRYPqlSSISSGDILRDNIK 47
                79***************9988887433334455555554 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.3
      AAA_33 101 ivvvetdeetlkeRlakR 118
                 +v ++t+ +++ eR+  R
  KHJ35281.1 155 VVSLKTPISKIIERINGR 172
                 688999999999999988 PP

  == domain 3  score: -0.6 bits;  conditional E-value: 0.45
      AAA_33 113 eRlakRaangddrsevpeealdrqkarfe 141
                 eRl kR+++    +e  e  l++++++ e
  KHJ35281.1 200 ERLTKREDD---NIETWENRLKQFQKTSE 225
                 789999996...46667777777766665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       604  (0.0336884); expected 358.6 (0.02)
Passed bias filter:                      565  (0.0315132); expected 358.6 (0.02)
Passed Vit filter:                        64  (0.00356964); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1885.64
//
Query:       KHJ35282.1  [L=74]
Description: hypothetical protein EV44_g3050 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-11   44.0   6.7    2.7e-11   43.4   6.7    1.3  1  zf-met2   Zinc-binding
  ------ inclusion threshold ------
      0.014   16.3   6.2      0.014   16.3   6.2    2.1  2  4F5       4F5 protein family
      0.026   15.2   0.9      0.037   14.7   0.9    1.3  1  BIR       Inhibitor of Apoptosis domain


Domain annotation for each model (and alignments):
>> zf-met2  Zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   6.7   4.6e-15   2.7e-11       1      37 [.      35      70 ..      35      71 .. 0.98

  Alignments for each domain:
  == domain 1  score: 43.4 bits;  conditional E-value: 4.6e-15
     zf-met2  1 iCkiCrqtFmcTtkevlLkeHaenKHpKdtveeCFPg 37
                +C +C  tF++T+++++L+eH   KH K+ +++CFP+
  KHJ35282.1 35 QCCVCKLTFLKTARAPALEEHSVQKHKKT-IKDCFPN 70
                8****************************.******8 PP

>> 4F5  4F5 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   16.3   6.2   2.3e-06     0.014       1      37 [.       1      32 [.       1      33 [. 0.96
   2 ?   -0.4   0.2      0.37   2.2e+03      10      24 ..      47      62 ..      45      66 .. 0.60

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 2.3e-06
                ---SGGGTTTSTTT---SS...SS-SS-SS----TT- CS
         4F5  1 MtRGnQRdqaRernqKKaaeqkgkgaksglkaaeral 37
                M++G++++ +R r  K      +k aks+lk +e+a+
  KHJ35282.1  1 MGNGAKAASKRDRKEKL-----VKPAKSQLKSNEKAK 32
                9************9999.....*************96 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.37
                TSTTT---SS....SS CS
         4F5 10 aRernqKKaaeqk.gk 24
                aR+ +++++  qk +k
  KHJ35282.1 47 ARAPALEEHSVQKhKK 62
                5666777777666443 PP

>> BIR  Inhibitor of Apoptosis domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.7   0.9   6.2e-06     0.037      21      69 ..      15      67 ..       5      70 .. 0.74

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 6.2e-06
         BIR 21 eeLaeaGFyytptseskdnvqCfyCklaldgwee....dDdpleeHkkhspkC 69
                e+L++      +++e+ + +qC +Ckl++ +  +    +++ +++Hkk+ ++C
  KHJ35282.1 15 EKLVKPAKSQLKSNEKAKDIQCCVCKLTFLKTARapalEEHSVQKHKKTIKDC 67
                556665555666778899********998776541222679***********9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1007  (0.056166); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.36u 0.26s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 569.50
//
Query:       KHJ35283.1  [L=406]
Description: putative cuticle-degrading serine protease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.5e-36  124.1  22.6    1.1e-35  123.3  22.6    1.3  1  Peptidase_S8  Subtilase family
    8.8e-09   35.9   0.5    2.1e-08   34.7   0.5    1.7  1  Inhibitor_I9  Peptidase inhibitor I9


Domain annotation for each model (and alignments):
>> Peptidase_S8  Subtilase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.3  22.6   1.2e-39   1.1e-35       1     275 [.     158     378 ..     158     395 .. 0.87

  Alignments for each domain:
  == domain 1  score: 123.3 bits;  conditional E-value: 1.2e-39
                   -TT-EEEEECS-B-TT-TTTGGGEEE..EEEE---TTSG.GGEETT-SS-TT-SC-SSS....HHHHHHHHHH-B..SSSSSB-SSTTSEEEEEE-S CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8   1 gkgvlvavlDtGvdpshpdlsvttdgerklvdvideegagfngadsettstnwarddngnsieHGthvAGiaaanapeegekngvapgakilsvkvl 97 
                   g++v+v ++DtGv  +h +++    g ++             ga+  ++s n  +d+ng    HGth+AG+++++        gva +++i +vkvl
    KHJ35283.1 158 GRDVTVYIVDTGVYAEHSEFN----GRAS------------MGANFVSGSAN--TDENG----HGTHCAGTIGGS------TYGVAKNVTIVGVKVL 226
                   89*****************99....3333............34455555554..45555....***********9......99************** PP

                   STTSB-HH..HHHHHHHHHHHH..CT-SEEEE-EESCETTCHHCHHHHHHHHHHHH.CCT-EEEEE--SS-T-HHEEE-TTCEECTTTSTTCEEEEE CS
                   xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8  98 dtsggsmetgteliraieeaae..dkvdvinmslgestslpktgrsiealainravnkkgvlvviSaGNngktgsslqagspvgtpstsknvitvga 192
                   +++g  ++  +++i++i+++a    +  v++mslg ++      +     a+  +v ++gv vv++aGN++       a++  ++p++++++itvga
    KHJ35283.1 227 NADGAGSN--SGVISGINWVASnaGGSGVLSMSLG-GYYSAALNQ-----AVTSTV-NSGVSVVVAAGNDN-------ANAALYSPASAQSAITVGA 307
                   99998875..9*********99544455*******.666666665.....788888.89************.......9****************** PP

                   ESTTSSB-TT--B-TT.......-EEEE-S-CCCCCCCCCHHHTTTHHEEEE-SHHHCHHHHHHHHHHHHHHHTT--HHHHHH CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8 193 yttegkiapfSsrGpssdgklkpdivapGgnivstwsrqsnnsaglssyqsmsGTSmAsPnaagaaAlllsalpkltpetvra 275
                   +++ +  a+fS++G+++      d+ apG+ni+s+w  ++      + ++++sGTSmA+P++ag +A l+s  +  +p +v++
    KHJ35283.1 308 ISSSNAKASFSNYGSVV------DVFAPGVNILSSWIGNK------TATNTISGTSMATPHVAGLVAYLISLEKLSSPSEVSS 378
                   ****************9......6***************9......3479*********************999999988876 PP

>> Inhibitor_I9  Peptidase inhibitor I9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.7   0.5   2.4e-12   2.1e-08       2      80 ..      44     123 ..      43     125 .. 0.90

  Alignments for each domain:
  == domain 1  score: 34.7 bits;  conditional E-value: 2.4e-12
                   EEEEE-TTS-HHHHHHHHHHHHH.....HHHHTT..--EEEEEEESS.SSSEEEEEE-GGGHHHHHTSTTEEEEEEEEEEE CS
  Inhibitor_I9   2 YIVtfkeaakaakkassheswhqsl.lksvlkgedsakagilysYki.lfnGfavklteeqaeklrkrpeVesVepDqsvr 80 
                    IV+ +++a+ ++ +s he++++s+  k+ +++++++ +gi+ s +  +++G+ ++ +e+ + +++++peV+++e+D+ v+
    KHJ35283.1  44 WIVVYRRDASDSQ-ISNHEQSVKSFfGKRDKTKKKKTAHGIKASWHMrSLRGYHIHTNEDFITTIAASPEVDYIERDTLVS 123
                   6999999999999.***********655555555799****************************************9986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (406 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       715  (0.0398795); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.51u 0.24s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2989.44
//
Query:       KHJ35284.1  [L=285]
Description: hypothetical protein EV44_g5514 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00034   20.6   0.2     0.0005   20.0   0.2    1.3  1  DUF1917         Domain of unknown function (DUF1917)
     0.0071   16.4   2.2       0.15   12.2   0.5    2.4  2  ARL2_Bind_BART  The ARF-like 2 binding protein BART


Domain annotation for each model (and alignments):
>> DUF1917  Domain of unknown function (DUF1917)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.0   0.2   5.6e-08    0.0005      57     164 ..     163     270 ..      83     274 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.0 bits;  conditional E-value: 5.6e-08
     DUF1917  57 egspdarqleEsvedFLaRLpPstTk.asekgpWiyianpaedeapeeegsdlaklveegtelLqeleekkqelekenakkkk..kskaalkrelnker 152
                    ++ ++l+Es++dF++R+  + T+ + ek++++ i+++ e+ +++++ +d a +  e +  L+ +e+++ ++ k+++++++  +s    kr+ ++  
  KHJ35284.1 163 YSFKEYKKLHESAKDFMERI--QCTPiELEKVAYVLIKEQ-EQYQKQSPRKDRALVSLEENPGLSIFEHEQPKYLKNHQRHPEtrRSGEEKKRKRHQSP 258
                 56778899************..56665889**********.899999999999999999999*********9999999988875577788888888889 PP

     DUF1917 153 keleeeilelAr 164
                 ++l +ei + A 
  KHJ35284.1 259 QDLCDEISREAI 270
                 999999988775 PP

>> ARL2_Bind_BART  The ARF-like 2 binding protein BART
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.5   0.0    0.0085        76      18      76 ..      43     103 ..      32     120 .. 0.74
   2 !   12.2   0.5   1.7e-05      0.15      32      88 ..     150     205 ..     137     217 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.0085
                     HHHHHHHHHHHHHHTT--.SS-SSTTHHHHHHHHHHHHHHHHHH.HHTT-SSS--THHHHH CS
  ARL2_Bind_BART  18 fkspvqeFidencivFdd.eeenkleytdihkeYkklveklles.lleeigismeefleal 76 
                     +++ +++F +   ++ d  + e+ +e++ +h  ++  + kl++s   +++ ++ ++ +e+ 
      KHJ35284.1  43 YETVIMKFNKSTGDTMDIsDVEKLIEWKMLHGTFRPNLRKLISSnSNNTLAVTTKNAFEYY 103
                     66777777777777777734566779******************88888888888888777 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 1.7e-05
                     TT--SS-SSTTHHHHHHHHHHHHHHHHHHHHTT-SSS--THHHHH....SS-GGSSH CS
  ARL2_Bind_BART  32 vFddeeenkleytdihkeYkklveklleslleeigismeeflealekslsekkevak 88 
                      F  ++ +k++ +  +keYkkl e+  ++++e+i++++ e+++  +  ++e+++++k
      KHJ35284.1 150 KFLCSNGKKVSLKYSFKEYKKLHESA-KDFMERIQCTPIELEKVAYVLIKEQEQYQK 205
                     34455789999999********9985.88************9998555555554433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1061  (0.0591779); expected 358.6 (0.02)
Passed bias filter:                      416  (0.0232026); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 2123.94
//
Query:       KHJ35285.1  [L=3142]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-86  289.6   0.2      3e-86  288.4   0.2    1.6  1  DUF3638     Protein of unknown function (DUF3638)
    3.4e-15   55.1   0.1    9.7e-15   53.7   0.0    1.9  2  DUF3645     Protein of unknown function (DUF3645)
  ------ inclusion threshold ------
       0.04   14.0   0.6       0.97    9.6   0.3    3.2  2  DMAP1_like  Putative DMAP1-like
      0.056   13.7   0.0       0.37   11.1   0.0    2.5  1  TcdB_N      TcdB toxin N-terminal helical domain


Domain annotation for each model (and alignments):
>> DUF3638  Protein of unknown function (DUF3638)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  288.4   0.2   6.6e-90     3e-86       1     225 [.    1974    2197 ..    1974    2198 .. 0.99

  Alignments for each domain:
  == domain 1  score: 288.4 bits;  conditional E-value: 6.6e-90
     DUF3638    1 henwdplehpewLlleiesniliReeQaevAkemispssgensvlQLnmGeGKssvIvPivaaaladgkkLvrvivlkpllkqmaqlLvskLgglln 97  
                  henw+p+ hp+wLllei+ n+liR+ Q++vA+e+i p++g+nsvlQ+nmG+GK+s+I+P+vaa+ladg +Lvrviv+kpll+q++ lL+++Lggl++
  KHJ35285.1 1974 HENWNPMIHPDWLLLEIDGNFLIRPGQIDVARETIFPTNGKNSVLQMNMGQGKTSCIMPMVAASLADGVNLVRVIVPKPLLTQTILLLQTRLGGLVG 2070
                  89*********************************************************************************************** PP

     DUF3638   98 rrvyhlpfsRslklteekaeairklleeclkeggvllvqpehilSfkLmglekllskkeekvakelletqkwldessrdilDEsDellsvkfeLiYt 194 
                  r v h+pf+R+l+  ++ ae++ + l++++k +g++++ pehilSfkL++ ++l++ + + +++ + e+q+w+ e+srdi+DE+De+ls++++LiY+
  KHJ35285.1 2071 RIVKHVPFNRKLSKYQNIAENYLDQLQQIQKVSGIIVTLPEHILSFKLSVNQALSDGRIN-QSRFMSEAQNWILEKSRDIIDECDEILSIRTQLIYP 2166
                  ********************************************************8887.9*********************************** PP

     DUF3638  195 vGsqepvegspdRwkvvqevLslvkelaeel 225 
                  +G+q++++g+p Rw++v+++L+lvk+++++l
  KHJ35285.1 2167 SGTQKTIDGHPYRWEIVETLLQLVKSHINSL 2197
                  ***************************9876 PP

>> DUF3645  Protein of unknown function (DUF3645)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.2   5.3e+03       9      15 ..     382     388 ..     382     389 .. 0.89
   2 !   53.7   0.0   2.2e-18   9.7e-15       1      33 []    2314    2346 ..    2314    2346 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.2
     DUF3645   9 VPYrAKD 15 
                 +P+rA D
  KHJ35285.1 382 IPFRAED 388
                 7****99 PP

  == domain 2  score: 53.7 bits;  conditional E-value: 2.2e-18
     DUF3645    1 dpsRtllAVPYrAKDvPserSEFsHpDvvIvLT 33  
                  +p R+++AVPY AK++Ps +SE++HpDv+I+LT
  KHJ35285.1 2314 HPLRDPIAVPYYAKGCPSDQSEWGHPDVAIILT 2346
                  6779****************************9 PP

>> DMAP1_like  Putative DMAP1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   0.3   0.00022      0.97      26     100 ..    1547    1620 ..    1523    1622 .. 0.86
   2 ?    0.0   0.0       0.2   9.1e+02      38      73 ..    1767    1802 ..    1748    1809 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00022
  DMAP1_like   26 gEllkyaideledkelkikeiinkkqsypnvfLaSslgfskstwnkkvekiLkkfgldkklkyptlrnmlrfEkL 100 
                   +l+ + i +     ++  + i+k+ +y  +fL   + f k+ +n +++  L  f +++ lk++   n+l +   
  KHJ35285.1 1547 SDLMDMDIRSHWGSLVNTMRSIEKSSKYKLMFLLGIISFHKN-VNMNIITSLIAFAISNELKVLEPPNCLFYHNY 1620
                  56667777777788889999*******************995.7999*********************9988665 PP

  == domain 2  score: 0.0 bits;  conditional E-value: 0.2
  DMAP1_like   38 dkelkikeiinkkqsypnvfLaSslgfskstwnkkv 73  
                   ++ + +  i+ ++   + f  Ssl f ks+++  +
  KHJ35285.1 1767 STKFHSNSNIGTSTDQKPLFTWSSLDFDKSNVSSCY 1802
                  45556677899999999*************998766 PP

>> TcdB_N  TcdB toxin N-terminal helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   8.2e-05      0.37       6      49 ..    2344    2385 ..    2342    2390 .. 0.94

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 8.2e-05
                  HHHHHHHHHHTTTTS-HHHHHHHHHHHHHHHHHHHHHSTT-TTH CS
      TcdB_N    6 ilenleeklnklseeqskkkyellkklkkeidnYnnlykkekns 49  
                  il+ l++++ ++s+ q+ + ++++++ ++ i+ Yn+l    +ns
  KHJ35285.1 2344 ILTCLAFYFEGISSSQLCQTLKQISQVSDPIQAYNSL--IQGNS 2385
                  677899*******************************..99999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (3142 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       749  (0.0417759); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 1.33u 0.28s 00:00:01.61 Elapsed: 00:00:00.49
# Mc/sec: 19268.11
//
Query:       KHJ35286.1  [L=369]
Description: hypothetical protein EV44_g5494 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.36   11.0   2.2       0.98    9.6   2.2    1.8  1  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   2.2   5.5e-05      0.98       6      18 .]     293     305 ..     290     305 .. 0.94

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 5.5e-05
                 SSSSSSTTTTSTS CS
     zf-CCHC   6 CGepGHiardCpk 18 
                 CG++GH++ +C++
  KHJ35286.1 293 CGKTGHVKPNCKN 305
                 ***********85 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (369 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       599  (0.0334096); expected 358.6 (0.02)
Passed bias filter:                      447  (0.0249317); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 2872.87
//
Query:       KHJ35287.1  [L=179]
Description: hypothetical protein EV44_g3596 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      401  (0.022366); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1418.94
//
Query:       KHJ35288.1  [L=381]
Description: hypothetical protein EV44_g0341 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        2.1    8.0   7.6        3.4    7.3   7.6    1.3  1  Syntaxin  Syntaxin
        5.1    5.5  14.7        5.8    5.3  14.7    1.1  1  Macoilin  Macoilin family
         10    5.5  11.3        7.9    5.8   9.8    1.5  1  Cluap1    Clusterin-associated protein-1


Domain annotation for each model (and alignments):
>> Syntaxin  Syntaxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   7.6   0.00057       3.4      10     125 ..     209     325 ..     202     340 .. 0.66

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.00057
    Syntaxin  10 eikkeiekleeevkklkkqneesktstraksvklkkrmesdikeikkra.esvkarLeaLdksnkenekks..gegsavdRirksqtaaLrkklkevmt 105
                 +++   e+++ +vk+ +++ ++ ++s +++++  k+++ s   + k+ a +++k+r + L+++   n  ++  g+++ v R  +s t+ L++ l+   +
  KHJ35288.1 209 QVEATPEEIDAAVKSSTSSSSSKISSESSDDS--KSDTTSSNIKTKNAAkRDLKKRDQFLKNNKFTNILQKrnGKSNLVPRHDTSPTNILKRDLQTSKS 305
                 56666667777666665555555555555555..55555444444444414556655555555444433335699999********************* PP

    Syntaxin 106 eynelrekireeykerieRr 125
                 + n+lr+++r+   +  +Rr
  KHJ35288.1 306 SLNNLRNEKRSIDNSLEKRR 325
                 *******9998655544444 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3  14.7   0.00098       5.8     289     446 ..     198     355 ..      81     375 .. 0.49

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.00098
    Macoilin 289 menkskskrlsksessgsesellveesvkskssssssssnknskkasa.gsagssnssskkhsessksvtsssssknskkqklpaGkssa..alkdaae 384
                 +   + +k+l + e++ +e +  v++s++s+ss  ss+s+ +sk+ ++ +++++ n++ ++++++++  ++ + ++    qk   Gks+   ++  +  
  KHJ35288.1 198 KMGCIFTKKLIQVEATPEEIDAAVKSSTSSSSSKISSESSDDSKSDTTsSNIKTKNAAKRDLKKRDQFLKNNKFTNI--LQKR-NGKSNLvpRHDTSPT 293
                 33333344444444555555555555555555555554444443333202333334444444444433333332222..2222.233333224444445 PP

    Macoilin 385 nslpnnqlskkdalvrLeadikkLkaeLqasrqt.eqelrskissltseerslkselqqlkke 446
                 n+l  +  + k+ l  L ++ + +   L++ r +   +++++++s  s   s   e+++l+k 
  KHJ35288.1 294 NILKRDLQTSKSSLNNLRNEKRSIDNSLEKRRVVmTPDIQKQVHSVKS-TFSSDFEVGHLNKG 355
                 555555555555566666666666666666665413456666666555.34444555555555 PP

>> Cluap1  Clusterin-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8   9.8    0.0013       7.9     101     212 ..     218     331 ..     203     352 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.0013
      Cluap1 101 ekeeeekststeldlssklsdlkaarqlaseitekgasLydlLekevelrear.tkals.rqleleeiekalkeaikkvkeelektkkalenlesdean 197
                 +++ +++++s++ ++ss+ sd  ++ + +s+i +k a+  dl ++++ l++++ t++l+ r+   + + ++ ++ ++ +k++l+++k++l+nl++++++
  KHJ35288.1 218 DAAVKSSTSSSSSKISSESSDDSKSDTTSSNIKTKNAAKRDLKKRDQFLKNNKfTNILQkRNGKSNLVPRHDTSPTNILKRDLQTSKSSLNNLRNEKRS 316
                 44555666777999***********************99999999999998872444444777888899999999999********************* PP

      Cluap1 198 Leakiekkkqelera 212
                 +++ +ek++  +   
  KHJ35288.1 317 IDNSLEKRRVVMTPD 331
                 ********9876543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (381 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1556  (0.0867868); expected 358.6 (0.02)
Passed bias filter:                      450  (0.025099); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 2790.11
//
Query:       KHJ35289.1  [L=562]
Description: putative glycosyl [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
      0.015   15.4   0.2      0.053   13.6   0.0    1.9  2  Cpn10           Chaperonin 10 Kd subunit
       0.11   12.8   0.2       0.38   11.1   0.0    1.9  2  Retrotrans_gag  Retrotransposon gag protein


Domain annotation for each model (and alignments):
>> Cpn10  Chaperonin 10 Kd subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.52   4.7e+03      22      33 ..     349     360 ..     342     362 .. 0.79
   2 ?   13.6   0.0   5.9e-06     0.053      15      76 ..     458     519 ..     455     525 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.52
                 TT----HHHHHS CS
       Cpn10  22 ggiilpdsakek 33 
                 g ii+p+++k k
  KHJ35289.1 349 GHIIIPEQEKVK 360
                 789***998876 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 5.9e-06
                 GG-TTS-TT----HHHHHSEEEEEEEEE-T........TS-TTS--T-EEEEEGGGTSS-GG CS
       Cpn10  15 eeeekteggiilpdsakekpeqGvVvaVGegarnekgedvplevkvgdkVlfpkyagtkvkv 76 
                 ++ee t++ i++ +  ++k   G+V+  G+ +++++g++ +l +k+  +++++  ++ ++kv
  KHJ35289.1 458 ANEEDTDSNILMIKRYNDKYFYGIVIDTGASKYSTAGHKQSLALKKISNTYLDTTKAGSIKV 519
                 6799******************************************9999999888777776 PP

>> Retrotrans_gag  Retrotransposon gag protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   4.2e-05      0.38       3      57 ..     179     231 ..     177     238 .. 0.92
   2 ?   -2.4   0.1      0.68   6.1e+03      34      75 ..     369     405 ..     356     419 .. 0.53

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4.2e-05
  Retrotrans_gag   3 astslegaAkswlkslvarsidasesWkdlkkaflktflpserkdqleeelsslr 57 
                      st l+g+A++++ s+ ++  ++  ++++l++a ++ f+ +e+k+   +++ sl+
      KHJ35289.1 179 YSTMLTGPALTHYYSITSNGHRK--NFNKLSTATRDYFEGPETKRNRSARWESLN 231
                     5789******************5..******************999998888875 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.68
  Retrotrans_gag  34 kaflktflpserkdqleeelsslrQgtesvreYvtrfktlad 75 
                     ++f+++  +  + ++ e +  ++ Q +es  e+  +f+tl+ 
      KHJ35289.1 369 QRFKDNADH--YIAEIEGRADDIDQ-KESNLEF--EFDTLIL 405
                     334433333..44444444455555.5554455..5555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (562 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       584  (0.0325729); expected 358.6 (0.02)
Passed bias filter:                      337  (0.0187964); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 4048.34
//
Query:       KHJ35290.1  [L=507]
Description: putative myo-inositol transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.2e-98  331.0  28.4    1.3e-98  330.8  28.4    1.0  1  Sugar_tr         Sugar (and other) transporter
    1.3e-30  106.5  32.0    1.3e-30  106.5  32.0    1.8  2  MFS_1            Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  330.8  28.4  1.5e-102   1.3e-98       1     452 []      26     480 ..      26     480 .. 0.94

  Alignments for each domain:
  == domain 1  score: 330.8 bits;  conditional E-value: 1.5e-102
                 HHHHHHHHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTT CS
    Sugar_tr   1 valvaalggllfgYdtgvigafltllkfaknfglsksksskeessvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgk 99 
                 v+l a+lgg+lfgYdtgvi+a+l +l++   ++ls+ ++  e       l++si++ Ga+ G + agl++d++GRk ++ i++ +fv ga+lqaaa   
  KHJ35290.1  26 VCLSASLGGFLFGYDTGVISAVLIFLSTDLGHQLSNGEK--E-------LVTSITSGGALTGTVAAGLMADKYGRKRVIYIGCSFFVLGAILQAAAF-- 113
                 799************************777777777664..4.......89**********************************************.. PP

                 SS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS---HHHH CS
    Sugar_tr 100 nsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllflPESPryl 198
                   v ++++gR+lvG+g+G++ +++P+yi+Ei+p+++Rg+l++ + l+itfG+lv++++g  +  +s   gwr+++gl+++p +ll+ ll flPESPr l
  KHJ35290.1 114 -GVIQMTIGRLLVGFGIGCVAMVIPLYIAEISPARYRGKLIGANTLSITFGQLVSYGIGGLFGSVSC--GWRWMVGLAVAPGILLASLLPFLPESPRQL 209
                 .9************************************************************99999..9***************************** PP

                 HHTT-HHHHHHHHHHHHHC...HHHHHHHHHHHHHHHHHHH.......HTTHHHHSH......HHHHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THH CS
    Sugar_tr 199 vekgkeeeakevlaklrge...edadrelaeekdsleaeqeee..kaswkellsskt...vrqrlligvvlqifqqltGinaimyysptifenlglsks 289
                 ++++k+eea +vl ++  +   e++++++  +   +e + + +  k +w ++++ +    ++++++ +++++++ q+tG n +myys t+f+ +g++++
  KHJ35290.1 210 LIHQKTEEASRVLHRIFPNatsEQVQQKIRHISVHIELANDLQdgKSKWWTFKQLFVvpaNLRATIAACGVMALSQFTGFNNLMYYSATLFSVIGFKNP 308
                 ***************544434599999999999999999888899888877777766677*************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS..............CHHHHHHHHHHHHHHHTTTTHHHHHHHHH CS
    Sugar_tr 290 llvtiivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilgivalllvaks...........kaasivaivfialfialfalgwgpvpwvlvsE 377
                 + v  +v +vn ++t++ i +vdr+GRR++ll  + g ++++++++ + + ++  s           ++ ++++++ ++  ++++a+g+gp+ wv  +E
  KHJ35290.1 309 VGVGSMVAAVNCIFTIMYISVVDRLGRRRVLLCTVWGVSFFLALVA-ASFHYTPISvdisvpldikiSWSAYLVLASMMGLVVFYAIGIGPLAWVS-TE 405
                 *********************************9999999998888.44444444445568899999***************************98.** PP

                 HSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHT-HHHHHHHHHHHHHHHHHHHHS--STT--CCCCGGGT CS
    Sugar_tr 378 lfpqsvRskalaiavavnwlanflisllfpiiteaigggyvflvfaglavlfiifvfffvpetkgrtleeieelf 452
                 +fp++vRs+++++ + ++w+ n++is +f + +e+ + +++f+++ ++++++ + ++f++pe kg +le i+e+f
  KHJ35290.1 406 FFPLEVRSLGTMVMTISHWVPNIIISSTFLTQMEKTTPTGTFAFYSAICLAGWVAIYFCYPEVKGMSLENIKEIF 480
                 ***********************************************************************9987 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.5  32.0   1.5e-34   1.3e-30       2     341 ..      31     419 ..      30     430 .. 0.74
   2 !    7.3  15.1   0.00022       1.9      38     174 ..     312     467 ..     311     478 .. 0.73

  Alignments for each domain:
  == domain 1  score: 106.5 bits;  conditional E-value: 1.5e-34
       MFS_1   2 llaaflsalarsilgpalplalaedlg..ispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllll.fasslwlllvlrvlqGl 97 
                 +l++fl +++ ++++++l  +l++dlg  +s  e  l++++ + ga+ +++ +G ++d++Gr+rv+ +g  +f+lg ++l   a ++  + ++r+l G+
  KHJ35290.1  31 SLGGFLFGYDTGVISAVLI-FLSTDLGhqLSNGEKELVTSITSGGALTGTVAAGLMADKYGRKRVIYIGCSFFVLG-AILQaAAFGVIQMTIGRLLVGF 127
                 6899**************9.*******999999*******************************************.555522355556********** PP

       MFS_1  98 gagalfpagaaliadwfpkeergraigllsagfslGailgpllgglla.sslgWravfyilaivsllafvlfllllpeepperkrkspkeee....... 188
                 g g+++ ++  +ia+++p + rg+ ig  ++++ +G ++ +++ggl+   s gWr++  ++ + ++l++    ll + ++++r+   +++ e       
  KHJ35290.1 128 GIGCVAMVIPLYIAEISPARYRGKLIGANTLSITFGQLVSYGIGGLFGsVSCGWRWMVGLAVAPGILLAS---LLPFLPESPRQLLIHQKTEeasrvlh 223
                 ************************************************99999****9999999999977...4445555555555555555569**** PP

       MFS_1 189 ...........................kgtgpaplvpawkallkdpvlwillialllfffgfsg......lltllplylqevlgls.glllaglllall 253
                                             ++g++++ + +k+l+  p  + + ia+++++ ++s+      l++++ + l +v g++   + +g   +++
  KHJ35290.1 224 rifpnatseqvqqkirhisvhielandLQDGKSKWWT-FKQLFVVPANLRATIAACGVM-ALSQftgfnnLMYYSAT-LFSVIGFKnP-VGVG---SMV 315
                 ***********99999999999999999999999999.********5553444444443.22223566669999999.59******52.3333...444 PP

       MFS_1 254 alvgailallagrlsdrlgr....rrrlllallllllaalglallavt............ssavllllvlvl...iGf..glgfvfpsllalasdlapp 331
                 a+v++i+ ++   ++drlgr     ++ +   ++l+l+a+++ +++ +            +  ++    lvl   +G+  ++++  ++l+ + ++++p 
  KHJ35290.1 316 AAVNCIFTIMYISVVDRLGRrrvlLCTVWGVSFFLALVAASFHYTPISvdisvpldikisW--SA---YLVLasmMGLvvFYAIGIGPLAWVSTEFFPL 409
                 4444444444445555555511115555555555555555555555559999999764221..22...2222112333213444466666666666676 PP

       MFS_1 332 eeagtasglf 341
                 e +   + ++
  KHJ35290.1 410 EVRSLGTMVM 419
                 6666665555 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.00022
       MFS_1  38 ltlyalgaavaslplGrlsdrfGrrrvlllglllfalg.lllll.fa.ss.............lw.lllvlrvlqGlga..galfpagaaliadwfpke 117
                  +++a++ +++++ + +++dr+Grrrvll+++ + +++ +l+++ f+ ++             +w + lvl  ++Gl    ++++   a + ++ fp e
  KHJ35290.1 312 GSMVAAVNCIFTIMYISVVDRLGRRRVLLCTVWGVSFFlALVAAsFHyTPisvdisvpldikiSWsAYLVLASMMGLVVfyAIGIGPLAWVSTEFFPLE 410
                 57888999******************************5555557633114456667777777666888888888875544888888888889999999 PP

       MFS_1 118 ergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpe 174
                  r++++ +++++  +  i+        ++    +++f +  +++l + v +++ +pe
  KHJ35290.1 411 VRSLGTMVMTISHWVPNIIISSTFLTQMEKTTPTGTFAFYSAICLAGWVAIYFCYPE 467
                 999998777776666666653333333355558888888888888888876666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (507 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       884  (0.0493056); expected 358.6 (0.02)
Passed bias filter:                      504  (0.0281109); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.30s 00:00:00.86 Elapsed: 00:00:00.41
# Mc/sec: 3674.35
//
Query:       KHJ35291.1  [L=450]
Description: putative snf7 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.9e-09   35.7  19.5    9.7e-09   35.1  19.5    1.4  1  Snf7          Snf7
    0.00068   19.8   0.3     0.0012   19.0   0.3    1.3  1  Casein_kappa  Kappa casein


Domain annotation for each model (and alignments):
>> Snf7  Snf7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.1  19.5   1.1e-12   9.7e-09       2     166 ..     243     404 ..     242     443 .. 0.91

  Alignments for each domain:
  == domain 1  score: 35.1 bits;  conditional E-value: 1.1e-12
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
        Snf7   2 airsLrkaerkldkkqeslekkikkleaelkklakkgnkdralllLKqkkryekqldqldnqlanleqvslaienlksnkevlnamkqgakamkamnkk 100
                 +i sL+k +++l+ ++e l++k  +l  ++k+ a  +n+ +al++LK +k   + +++ +++la+le+ + +i +++++ e+++  + +++++ + nk+
  KHJ35291.1 243 TIASLKKLIEDLNIQIEGLTQKYGELTDSAKNAASRNNRNAALVALKSRKIVDQTIEKRYATLAQLENTLSKIVQASTQVEFVKIIEASTEVLITLNKE 341
                 5789*********************************************************************************************99 PP

                 TC.CHHHHHHHHHHHHHHHHHTCHHHHHHHHHTT-GGTTHHHHHHHHHHHHHHHHHCSH.HHHHHHH CS
        Snf7 101 vd.idkidklmdeiedqmekaeeisEalsrslddadeedEeeleaeLdaLeqelgdeelldesvklp 166
                  + +   + + d ++dq++  +e++    ++l  + e+dE+ l+ eL+a+e + ++ e+l++++kl+
  KHJ35291.1 342 TQaLAPTEGVFDKLQDQIQLVDELDTQ--TTL--GLEVDEDMLDLELQAIERDQQELEELETKAKLD 404
                 873688999999999999999998763..444..469**************9966666556666665 PP

>> Casein_kappa  Kappa casein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.0   0.3   1.3e-07    0.0012      83     152 ..     272     343 ..     253     349 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.0 bits;  conditional E-value: 1.3e-07
  Casein_kappa  83 ypptvvrhpalhpsfiaippkkiqdktaiptintiatvepTp..vpttepvvntvvtpeassefii.stPett 152
                    + +   ++++++ ++a+ ++ki d+t+     t+a +e+T+  +  + + v+ v + eas+e++i    et 
    KHJ35291.1 272 AKNAA-SRNNRNAALVALKSRKIVDQTIEKRYATLAQLENTLskIVQASTQVEFVKIIEASTEVLItLNKETQ 343
                   44444.455699*****************************9778888999************9985555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (450 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1318  (0.0735122); expected 358.6 (0.02)
Passed bias filter:                      403  (0.0224776); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.44
# Mc/sec: 3073.29
//
Query:       KHJ35292.1  [L=240]
Description: putative cutinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-46  158.8   0.0    1.6e-46  158.5   0.0    1.1  1  Cutinase       Cutinase
    0.00031   20.4   0.0     0.0005   19.7   0.0    1.2  1  DUF2974        Protein of unknown function (DUF2974)
  ------ inclusion threshold ------
      0.037   13.9   0.0       0.11   12.4   0.0    1.7  1  Lipase_3       Lipase (class 3)
      0.093   12.5   0.0       0.18   11.6   0.0    1.4  1  Abhydrolase_2  Phospholipase/Carboxylesterase
       0.16   11.8   0.0       0.24   11.2   0.0    1.3  1  Abhydrolase_3  alpha/beta hydrolase fold
       0.19   10.8   0.0       0.31   10.1   0.0    1.3  1  Abhydrolase_9  Alpha/beta-hydrolase family


Domain annotation for each model (and alignments):
>> Cutinase  Cutinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.5   0.0   5.4e-50   1.6e-46       1     178 []      61     232 ..      61     232 .. 0.97

  Alignments for each domain:
  == domain 1  score: 158.5 bits;  conditional E-value: 5.4e-50
                 ---SEEEEEE--TT--TTT...SSHHHHHHHHHHHH.TTT-EEEEE------CGGSTTSS-HHHHHHHHHHHHHHHHH-TT-EEEEEEETHHHHHHHHH CS
    Cutinase   1 sckdvevifArgttepggl...gsvGeavvsalesavgsksvavqgvnYpAdleqlyegseeagakeaaalvqslaskCPdtkivlgGYSqGaqvidna 96 
                 +ck++++ifA+gt+e+g++   +s G+a+  +++++ g + +avqgv Y+Ad+e+++ g++ +g++ + ++++ +++kCP+t++v+gGYSqGaq+++na
  KHJ35292.1  61 PCKPITMIFAKGTGENGNVgdgSSPGPAWIAEMRKTRGLDMIAVQGVPYNADVEGYLIGGDPEGSERFLNITNLAVEKCPNTRLVIGGYSQGAQLAHNA 159
                 5******************776689************************************************************************** PP

                 HTT.....S-HHHHHHEEEEEEES-TTCCCCTTS-TTS-GGGEEEE--TT-GGGTS----GGGG-GGGG.HHHHHHHHHHH- CS
    Cutinase  97 ieggatatlpaavadkvaavvlfGdpsnvaglpevsklyaskikslCdagDpiCgsgneleaHlsYvseyttqaakFvvskl 178
                 +       ++++v+++v a+v+fGdp++ ++l+ + +    k+ s+C++gD+iC+     ++Hl+Y ++ +++aa+F++ +l
  KHJ35292.1 160 AMS-----FSPDVTSRVDAAVVFGDPKKSQPLGDIPP---MKVLSICHDGDIICNYIGGSAPHLTYSQD-AAKAASFAMTQL 232
                 ***.....*****************************...9****************************.99999**99875 PP

>> DUF2974  Protein of unknown function (DUF2974)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.7   0.0   1.7e-07    0.0005      80     119 ..     137     177 ..     127     185 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.7 bits;  conditional E-value: 1.7e-07
     DUF2974  80 eesegk.iylgGhSkGGnlAvyaamnaeddlqeriskiysf 119
                 e+ +++ +++gG+S+G+ lA+ aam  ++d+ +r+++++ f
  KHJ35292.1 137 EKCPNTrLVIGGYSQGAQLAHNAAMSFSPDVTSRVDAAVVF 177
                 555555599**************************998877 PP

>> Lipase_3  Lipase (class 3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   3.6e-05      0.11      58     137 ..     135     207 ..     124     211 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.6e-05
                 HHHHTT-EEEEEEEETHHHHHHHHHHHHHHHTT-SS---EEEEEES----B-HHHHHHHHT-TTEEEEEEEETT--GGG- CS
    Lipase_3  58 llekypeysivvtGHSLGgalAlLaaldlvengenekkkvtvvtfGqPrvgnkefaklvdsqlnkkvlrvvntnDivPrl 137
                  +ek p++++v+ G S G+ lA  aa+ +  +  +  +   +v+fG P+  ++ +++        kvl++++++Di+ ++
  KHJ35292.1 135 AVEKCPNTRLVIGGYSQGAQLAHNAAMSFSPDVTS--RVDAAVVFGDPKK-SQPLGDIPP----MKVLSICHDGDIICNY 207
                 68999*********************999998844..6677889999984.334444433....3588888888888766 PP

>> Abhydrolase_2  Phospholipase/Carboxylesterase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0     6e-05      0.18     101     125 ..     138     162 ..     128     173 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 6e-05
                    T--GGGEEEEEETHHHHHHHHHHHT CS
  Abhydrolase_2 101 gipssriiigGFSqGaalalylalt 125
                      p+ r +igG+SqGa la  +a++
     KHJ35292.1 138 KCPNTRLVIGGYSQGAQLAHNAAMS 162
                    47899*************9887765 PP

>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   8.1e-05      0.24      67     104 ..     138     175 ..     111     185 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 8.1e-05
                    TETTCEEEEEEETHHHHHHHHHHHHHHHTT---EEEEE CS
  Abhydrolase_3  67 gadpsrivlaGdSaGGnlaaavalrardegepkvagqv 104
                    ++ ++r+v++G S G++la+++a+ +  + +++v + v
     KHJ35292.1 138 KCPNTRLVIGGYSQGAQLAHNAAMSFSPDVTSRVDAAV 175
                    46788******************999888777776665 PP

>> Abhydrolase_9  Alpha/beta-hydrolase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1   0.0    0.0001      0.31     110     150 ..     143     184 ..     123     192 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.0001
  Abhydrolase_9 110 kllvfGeSLGalgse.aafseledllarvdgalwvGppnase 150
                    +l++ G S Ga  ++ aa+s   d+++rvd+a+  G p++s+
     KHJ35292.1 143 RLVIGGYSQGAQLAHnAAMSFSPDVTSRVDAAVVFGDPKKSQ 184
                    79*********8665056677889**************9997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (240 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       356  (0.0198561); expected 358.6 (0.02)
Passed bias filter:                      326  (0.0181828); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1802.19
//
Query:       KHJ35293.1  [L=526]
Description: putative family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.2e-17   61.6   0.0    1.4e-16   60.6   0.0    1.6  1  ThiF      ThiF family
    0.00028   21.0   0.1          1    9.6   0.0    2.6  2  E1_4HB    Ubiquitin-activating enzyme E1 four-helix bundle


Domain annotation for each model (and alignments):
>> ThiF  ThiF family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.6   0.0   1.6e-20   1.4e-16       1     230 [.      23     522 ..      23     526 .] 0.85

  Alignments for each domain:
  == domain 1  score: 60.6 bits;  conditional E-value: 1.6e-20
                 THHHHHHHHHHHHHHHHTSEEEEE..--SHHHHHHHHHHHHHTTTEEEEEESSB--GGGGGTBTTS-GGGTTSBHHHHHHHHHHHT-TTSEEEEEES-C CS
                 xxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF   1 ysrqlallgedgqekLrdskvllv..GaGglGsellknLalsGvgkltlvDnDkielsNlnRqflfreediGkpKaevaaealqeinpdveveavteri 97 
                 y+rql+l++ dgq++L+++ +ll+  G G +G e lknL+l G+gk+t++D  +++  +l   f   e+  Gk++ae+  ++l+e+n d++   ++  +
  KHJ35293.1  23 YDRQLRLWAADGQKALEQADILLInsGPGVVGVETLKNLVLPGIGKFTIIDSNQVSEADLGSNFFLDENCLGKSRAECCVRFLKELNEDTQ-GEYHSTL 120
                 89****9999*************877***************************************************************65.6677777 PP

                 CGCCS-HHHHTT-.SEEEEESSS..HHHHHHHHHHHHHHT-EEEEEEEETTEEEEEEEEECCS-ECTSS-.............TGGS.EECCCCEEHHH CS
                 xxxxxxxxxxxxx.xxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.............xxxxxxxxxxxxxxxx RF
        ThiF  98 tdetvleellesv.DlVvdalDn..iearrlvnracvkkgiplieagtlgfegqvvviipgktgcyeCld.............psstedptekkvplct 180
                 +    le+l+++     v+++    +e+   ++++ ++ +ipli    +gf++++  i+p++ ++   ++                            +
  KHJ35293.1 121 DVPY-LESLFTRRyFSFVLCTFPiqVEVLSVIKNYTHNFKIPLILIHSVGFYSYFKSILPETIPIVNTHPeaeasrdlrllnpW--------------K 204
                 6665.55665554244555555524777778***************************98777777777533333233333320..............1 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
        ThiF 181 ................................................................................................... 180
                                                                                                                    
  KHJ35293.1 205 elseftevltkdieqmndhkhshipyvalllyfltvwkkdhgrfpnsyteklefkkivaagrrinlgsteenfdeavaavmrniklstlsvatqkvfey 303
                 33333355556666666666667778889********************************************************************** PP

                 ................................................................................................... CS
                 ................................................................................................... RF
        ThiF 181 ................................................................................................... 180
                                                                                                                    
  KHJ35293.1 304 qpnekeaksnfwiitnavkqfykkhnllplpgsipdmkaessiyvqlqniykekarkdateileiilkhplgkniqlvevenycknaahiklihtynek 402
                 *************************************************************************************************** PP

                 ..........................................................................HHHCTE-B-HHHHHHHHHHHHHHHH CS
                 ..........................................................................xxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 181 ..........................................................................siagnipaiatttavvaglaalell 205
                                                                                           +       +  + ++ +g++a+e++
  KHJ35293.1 403 andlklvaktefendeiavvtsqplsllpiylalratshvptlspksivssiesdipriglnkriqkvsqevsrAK---GGELHNISSLTGGMVAQEVI 498
                 ********************************************************99999998876665443222...33588889999********* PP

                 HHHTTBCGGGCCEEEECCTTTTEEE CS
                 xxxxxxxxxxxxxxxxxxxxxxxxx RF
        ThiF 206 kllsgkeklenslltqvdllesrfe 230
                 kl+ ++ +  +++   +d+ +sr++
  KHJ35293.1 499 KLITRQYTPIDNTC-IFDGITSRMQ 522
                 ***77776766666.5666666555 PP

>> E1_4HB  Ubiquitin-activating enzyme E1 four-helix bundle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0   0.00011         1      12      70 .]     205     269 ..     168     269 .. 0.78
   2 !    8.7   0.0   0.00022       1.9      32      61 ..     313     342 ..     301     351 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00011
                 HTTS-.-BE-S-GGGTTCHHHHHHHHHHHHHH.....HHCTT----TT-H.HHHHHHHHHHHHHH CS
      E1_4HB  12 sleePeeflisDfakfdrpeqlHlafqALhaF.....eeehgrlPrplne.edaekvvalakeln 70 
                  l+e +e+l+ D ++++ ++  H+   AL  +     ++ hgr+P+ + e  +++k+va  +++n
  KHJ35293.1 205 ELSEFTEVLTKDIEQMNDHKHSHIPYVALLLYfltvwKKDHGRFPNSYTEkLEFKKIVAAGRRIN 269
                 33443899999************999999876444447899*****9988469999999877776 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00022
                 HHHHHHHHHHHHHHCTT----TT-HHHHHH CS
      E1_4HB  32 qlHlafqALhaFeeehgrlPrplneedaek 61 
                    ++ +A+++F ++h+ lP p +  d+++
  KHJ35293.1 313 NFWIITNAVKQFYKKHNLLPLPGSIPDMKA 342
                 5667889***************99888776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (526 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       775  (0.0432261); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.44
# Mc/sec: 3615.00
//
Query:       KHJ35294.1  [L=1017]
Description: putative integral membrane channel protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
  ------ inclusion threshold ------
       0.87   10.0   8.8        7.2    7.1   2.6    2.5  2  CENP-B_dimeris  Centromere protein B dimerisation domain


Domain annotation for each model (and alignments):
>> CENP-B_dimeris  Centromere protein B dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.1   2.6    0.0004       7.2       4      47 ..      34      78 ..      31      91 .. 0.66
   2 ?    6.0   0.4   0.00086        15      17      46 ..     752     782 ..     742     808 .. 0.68

  Alignments for each domain:
  == domain 1  score: 7.1 bits;  conditional E-value: 0.0004
  CENP-B_dimeris  4 qlleagedsesesdeeeeeeeedeededeeddedddevpv.psfg 47
                    ++ e+g+d   + +++    ++  +d+ +e++ed++  p+ p f 
      KHJ35294.1 34 DFSETGDDLSNDEEQNTRRGQDIGDDDTDEENEDGERHPLlPIFS 78
                    677888887666555555555556666677777887777425554 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.00086
  CENP-B_dimeris  17 dee.eeeeeedeededeeddedddevpvpsf 46 
                     d+e ++e  +d +de + +de +de+   s 
      KHJ35294.1 752 DKElNDETYDDGDDELNTNDETQDEISHCSS 782
                     4441455556667777899999999976654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1017 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       961  (0.0536003); expected 358.6 (0.02)
Passed bias filter:                      458  (0.0255452); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.73u 0.30s 00:00:01.03 Elapsed: 00:00:00.45
# Mc/sec: 6735.31
//
Query:       KHJ35295.1  [L=337]
Description: putative dna repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-05   24.2   0.8    8.3e-05   22.2   0.0    2.5  4  SAP            SAP domain
  ------ inclusion threshold ------
      0.021   15.4   5.1      0.021   15.4   5.1    1.9  2  zf-WRNIP1_ubi  Werner helicase-interacting protein 1 ubiquiti
       0.41   10.3   0.0       0.41   10.3   0.0    2.5  4  zf_UBZ         Ubiquitin-Binding Zinc Finger


Domain annotation for each model (and alignments):
>> SAP  SAP domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.5   8.9e+03      23      28 ..      62      67 ..      62      68 .. 0.83
   2 !   22.2   0.0   1.4e-08   8.3e-05       1      35 []     146     180 ..     146     180 .. 0.94
   3 ?   -2.3   0.0      0.66     4e+03       6      13 ..     195     202 ..     195     204 .. 0.84
   4 ?   -2.3   0.0       0.7   4.2e+03      10      18 ..     276     284 ..     276     285 .. 0.86

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.5
                -HHHHH CS
         SAP 23 kKaeLi 28
                +K+eLi
  KHJ35295.1 62 TKNELI 67
                799999 PP

  == domain 2  score: 22.2 bits;  conditional E-value: 1.4e-08
                 HTT--HHHHHHHHHHTT--TTS-HHHHHHHHHHHH CS
         SAP   1 lskltVaeLKeeLkkrGLptsGkKaeLieRLkeyl 35 
                 ls ++ ++LK++L ++GL++ G + +++ R +e++
  KHJ35295.1 146 LSMFKDSQLKKKLGEYGLSQGGSRLVMQRRFTEWI 180
                 6889**************************99985 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.66
                 HHHHHHHH CS
         SAP   6 VaeLKeeL 13 
                 V eL+ eL
  KHJ35295.1 195 VRELRGEL 202
                 78***999 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 0.7
                 HHHHHHTT- CS
         SAP  10 KeeLkkrGL 18 
                 K+e++++++
  KHJ35295.1 276 KAECEENNI 284
                 89**99987 PP

>> zf-WRNIP1_ubi  Werner helicase-interacting protein 1 ubiquitin-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   5.1   3.6e-06     0.021       3      21 .]      84     102 ..      83     102 .. 0.97
   2 ?   -3.4   0.0         3   1.8e+04       8      13 ..     289     294 ..     286     295 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 3.6e-06
  zf-WRNIP1_ubi   3 vqCPvCqqmmPAAHinsHL 21 
                    vqCP+C   mP   +n+HL
     KHJ35295.1  84 VQCPICNVQMPNSQVNAHL 102
                    9*****************8 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 3
  zf-WRNIP1_ubi   8 CqqmmP 13 
                      q mP
     KHJ35295.1 289 SSQYMP 294
                    569999 PP

>> zf_UBZ  Ubiquitin-Binding Zinc Finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   6.9e-05      0.41       3      22 ..      84     103 ..      83     103 .. 0.95
   2 ?   -2.9   0.0      0.89   5.3e+03       8      18 ..     106     116 ..     105     117 .. 0.78
   3 ?   -3.7   0.0       1.6   9.5e+03       8      13 ..     187     192 ..     186     194 .. 0.82
   4 ?   -3.0   0.1      0.99   5.9e+03       7      14 ..     328     335 ..     328     336 .. 0.84

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 6.9e-05
      zf_UBZ   3 ylCerCgkeipeselqEHeD 22 
                 ++C+ C+ ++p s++  H+D
  KHJ35295.1  84 VQCPICNVQMPNSQVNAHLD 103
                 58*****************9 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.89
      zf_UBZ   8 Cgkeipeselq 18 
                 C++e+++s ++
  KHJ35295.1 106 CKEEVSTSIRP 116
                 9**99987665 PP

  == domain 3  score: -3.7 bits;  conditional E-value: 1.6
      zf_UBZ   8 Cgkeip 13 
                 C+++ip
  KHJ35295.1 187 CDAKIP 192
                 999999 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 0.99
      zf_UBZ   7 rCgkeipe 14 
                 +C++ i+e
  KHJ35295.1 328 ECNAIISE 335
                 7**99987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (337 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       707  (0.0394333); expected 358.6 (0.02)
Passed bias filter:                      498  (0.0277762); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.39
# Mc/sec: 2597.70
//
Query:       KHJ35296.1  [L=350]
Description: putative cyclin b1 interacting protein 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
  ------ inclusion threshold ------
      0.064   13.2   0.0       0.15   12.0   0.0    1.6  1  Mito_carr  Mitochondrial carrier protein
        3.9    7.8   9.2       0.25   11.7   3.9    1.6  2  OmpH       Outer membrane protein (OmpH-like)


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   1.7e-05      0.15      65      95 ..      25      55 ..      18      57 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 1.7e-05
                GTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr 65 yrGllpnllrvapasalkfvlyetlkrlllk 95
                 +Gl+pn++     +al+f++y+t+++++++
  KHJ35296.1 25 LSGLSPNIIVECAGRALNFWAYQTTQEIVYQ 55
                58************************99875 PP

>> OmpH  Outer membrane protein (OmpH-like)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   3.9   2.8e-05      0.25       5     107 ..      47     154 ..      44     164 .. 0.80
   2 ?   -2.5   0.2      0.66     6e+03      76      89 ..     316     330 ..     305     341 .. 0.51

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 2.8e-05
                 E-HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS.........-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        OmpH   5 vdvqkileespegkaaqeqlekkfkklqaeleakekelqklqeelqkkakkl.e.......keekeqelqkkeqelqqkqqqkaqelqkkqqellkpil 95 
                   +q+i+ +   +k+  +++++ ++++++ + + + el +l++++  + +k  +       k + +q+l+++ ++  +  q+ + +l++++  ll  ++
  KHJ35296.1  47 QTTQEIVYQEYCAKNLTNKYAALSTQMDKIIHDANSELSNLRTKISSSVQKIvDgklilliKMDLAQQLRDRTRKHHE-TQELYDKLKRRN--LLCHVQ 142
                 567788888888899999999999999999999999999999999877777666999999999999999999999999.888989999999..777777 PP

                 HHHHHHHHHHHH CS
        OmpH  96 dkinkaikevak 107
                 + + +a+++  +
  KHJ35296.1 143 EAASDAVEQTIQ 154
                 777777766554 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.66
                 HHHHH.HHHHHHHHH CS
        OmpH  76 qqqka.qelqkkqqe 89 
                  q+++ + l  k++e
  KHJ35296.1 316 SQATQqRSLDHKENE 330
                 222222444444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       902  (0.0503096); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.18s 00:00:00.65 Elapsed: 00:00:00.35
# Mc/sec: 2987.46
//
Query:       KHJ35297.1  [L=1321]
Description: putative vps9 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.5e-18   65.1   0.1    1.6e-17   63.6   0.1    1.8  1  VPS9      Vacuolar sorting protein 9 (VPS9) domain
    4.3e-15   56.1   0.1    2.3e-05   24.9   0.0    4.2  4  Ank_2     Ankyrin repeats (3 copies)
    1.4e-14   54.0   0.0      3e-09   37.0   0.0    4.3  4  Ank_5     Ankyrin repeats (many copies)
    4.6e-08   33.5   0.1       0.22   12.2   0.0    5.2  4  Ank_4     Ankyrin repeats (many copies)
    3.9e-07   29.9   3.4       0.88   10.3   0.0    6.3  7  Ank_3     Ankyrin repeat
    2.7e-05   24.4   4.8        1.8    9.1   0.0    5.2  6  Ank       Ankyrin repeat
     0.0059   16.6   0.1      0.018   15.0   0.1    1.8  1  PX        PX domain
  ------ inclusion threshold ------
      0.012   15.2   0.6       0.92    9.1   0.0    3.2  3  WcbI      Polysaccharide biosynthesis enzyme WcbI


Domain annotation for each model (and alignments):
>> VPS9  Vacuolar sorting protein 9 (VPS9) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   63.6   0.1     7e-21   1.6e-17       2     100 ..     389     502 ..     388     505 .. 0.96

  Alignments for each domain:
  == domain 1  score: 63.6 bits;  conditional E-value: 7e-21
        VPS9   2 eqaseeLkklseaksPreKlkcllrtieeiteav..............skseegeslgaDdlLPiliyviikssppnlysnvqfikrFr.sktllegee 85 
                 ++a++e+ kl+ a sP++++++ll+t ++++ ++              +ks++  +++aD l ++l+ v++++++++l++ + +++ F   ++   ge 
  KHJ35297.1 389 GRAVDEFNKLNAAGSPQQMMDILLSTLKTVSRLTetqnvsiteetqsfEKSNPILTINADSLVSLLLIVVVRAKVRHLQARLSYMRYFIfIDDVEGGEM 487
                 6899*************************************************************************************88888888** PP

        VPS9  86 gYylttleaavefie 100
                 gY+l+tlea++++i 
  KHJ35297.1 488 GYALSTLEAVLSYIM 502
                 *************96 PP

>> Ank_2  Ankyrin repeats (3 copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0       4.2   9.5e+03      27      45 ..     515     534 ..     493     543 .. 0.61
   2 !   24.9   0.0     1e-08   2.3e-05      24      73 ..     651     713 ..     632     722 .. 0.82
   3 !    7.6   0.0    0.0025       5.7      24      58 ..     762     818 ..     738     819 .. 0.58
   4 !   19.6   0.0   4.6e-07     0.001      21      81 ..     810     873 ..     801     875 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 4.2
       Ank_2  27 ktaLhyAakngnl.eivklL 45 
                 +  L+ A+k+gn+ e+v++L
  KHJ35297.1 515 NKSLWQATKQGNIqELVSIL 534
                 45566666666554445444 PP

  == domain 2  score: 24.9 bits;  conditional E-value: 1e-08
       Ank_2  24 k.ngktaLhyAakngnleivklLle..h..........adndgrtpLhyAarsghleivklLl 73 
                 +  g+++L+ A++n + e++++Ll+  +          ++n+g+t L +A++ g+ +++k+ l
  KHJ35297.1 651 DlSGESILMMAVQNKQPECLEYLLSlkNyfpsdfvlgdVNNEGTTLLSAAVQLGQNNLIKIIL 713
                 14699*******************86525677778877779**********99999***9988 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.0025
       Ank_2  24 k..ngktaLhyAakng.nleivklLleh....................adndgrtpLh 58 
                 k  ng+t+L++ +++  +++  +l++e+                    +d +g+t Lh
  KHJ35297.1 762 KdrNGQTPLFAICRSYdHRD-YRLMVENalavamasqdngeplylddhVDAKGNTLLH 818
                 1358******9999762545.6777774455555443444444443444455777776 PP

  == domain 4  score: 19.6 bits;  conditional E-value: 4.6e-07
       Ank_2  21 dpnkngktaLhyAakngnleivklLleh....adndgrtpLhyAarsghleivklLl.ekgadinl 81 
                 d+  +g+t Lh+    g  + + lL++     ++ +  tpL++A+++g+le++++L+ ++ +d+++
  KHJ35297.1 810 DA--KGNTLLHIINDPGVANRILLLCDTdvnaTNHKKFTPLMVASKYGRLELIRVLFgDQRIDLHA 873
                 33..699****999999888888888867555557788******************9666777765 PP

>> Ank_5  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.2   0.0   0.00034      0.75      10      37 ..     648     677 ..     644     681 .. 0.86
   2 ?    0.7   0.0      0.31     7e+02      11      36 ..     688     713 ..     683     724 .. 0.85
   3 ?   -2.2   0.0       2.5   5.7e+03      41      53 ..     758     770 ..     756     770 .. 0.82
   4 !   37.0   0.0   1.3e-12     3e-09       4      56 .]     833     885 ..     830     885 .. 0.94

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00034
       Ank_5  10 nrldgggntpLhvAakygaadvvrlLl..a 37 
                 +++d  g+++L++A+ +  ++++++Ll  +
  KHJ35297.1 648 QTQDLSGESILMMAVQNKQPECLEYLLslK 677
                 5789999********************443 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.31
       Ank_5  11 rldgggntpLhvAakygaadvvrlLl 36 
                 + +++g+t L  A+  g  ++++++l
  KHJ35297.1 688 DVNNEGTTLLSAAVQLGQNNLIKIIL 713
                 67899************999999999 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2.5
       Ank_5  41 dlnltdsrGltal 53 
                  ++++d +G+t+l
  KHJ35297.1 758 PWRQKDRNGQTPL 770
                 5789999999997 PP

  == domain 4  score: 37.0 bits;  conditional E-value: 1.3e-12
       Ank_5   4 hgpadvnrldgggntpLhvAakygaadvvrlLl.argadlnltdsrGltaldlA 56 
                 ++  dvn+++ +++tpL+vA+kyg+++++r+L+ + + dl +++ rGlta++lA
  KHJ35297.1 833 CD-TDVNATNHKKFTPLMVASKYGRLELIRVLFgDQRIDLHAREYRGLTAVELA 885
                 55.69***********************************************99 PP

>> Ank_4  Ankyrin repeats (many copies)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.8   0.0   0.00026      0.58      30      55 .]     650     674 ..     640     674 .. 0.90
   2 ?    3.1   0.0      0.07   1.6e+02      26      39 ..     745     770 ..     693     775 .. 0.57
   3 ?   -1.3   0.0       1.6   3.7e+03      29      41 ..     808     819 ..     806     819 .. 0.86
   4 !   12.2   0.0   9.8e-05      0.22       3      39 ..     846     882 ..     829     885 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00026
       Ank_4  30 qdnrsGetalhiAakrgnveilklLl 55 
                 q + sGe+ l +A+++ ++e+l++Ll
  KHJ35297.1 650 Q-DLSGESILMMAVQNKQPECLEYLL 674
                 4.899********************8 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.07
       Ank_4  26 d............inaqdnrsGetal 39 
                 +            + +q++r+G+t+l
  KHJ35297.1 745 NatylltifgpilPWRQKDRNGQTPL 770
                 03333333333357888888888888 PP

  == domain 3  score: -1.3 bits;  conditional E-value: 1.6
       Ank_4  29 aqdnrsGetalhi 41 
                 ++ ++ G+t+lhi
  KHJ35297.1 808 HV-DAKGNTLLHI 819
                 67.899******7 PP

  == domain 4  score: 12.2 bits;  conditional E-value: 9.8e-05
       Ank_4   3 taLhyaaisgrlelvrlLl.ekgadinaqdnrsGetal 39 
                 t+L  a ++grlel+r L+ ++++d++a+   +G+ta+
  KHJ35297.1 846 TPLMVASKYGRLELIRVLFgDQRIDLHAR-EYRGLTAV 882
                 67888999999999999994459999999.99999986 PP

>> Ank_3  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0         8   1.8e+04       3      15 ..     245     257 ..     245     260 .. 0.84
   2 !    8.7   0.0    0.0013         3       2      23 ..     654     675 ..     653     681 .. 0.91
   3 ?   -2.0   0.0       4.1   9.2e+03       4      23 ..     695     714 ..     692     717 .. 0.82
   4 ?    0.3   0.0      0.73   1.6e+03       1      12 [.     765     776 ..     765     784 .. 0.91
   5 ?    0.8   0.1      0.51   1.1e+03       2      28 ..     813     836 ..     812     839 .. 0.65
   6 !   10.3   0.0   0.00039      0.88       4      30 ..     846     872 ..     843     873 .. 0.89
   7 ?    2.9   0.1      0.11   2.4e+02       6      23 ..    1134    1151 ..    1134    1157 .. 0.88

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 8
       Ank_3   3 etpLhlAarsgnl 15 
                 +t+ ++A+r +++
  KHJ35297.1 245 NTANFMAIRLNST 257
                 79999****9987 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0013
       Ank_3   2 GetpLhlAarsgnleivkfLle 23 
                 Ge++L++A+ +  +e +++Ll 
  KHJ35297.1 654 GESILMMAVQNKQPECLEYLLS 675
                 99******************98 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 4.1
       Ank_3   4 tpLhlAarsgnleivkfLle 23 
                 t+L  A+  g  +++k +l+
  KHJ35297.1 695 TLLSAAVQLGQNNLIKIILD 714
                 89999999999998888876 PP

  == domain 4  score: 0.3 bits;  conditional E-value: 0.73
       Ank_3   1 nGetpLhlAars 12 
                 nG+tpL+  +rs
  KHJ35297.1 765 NGQTPLFAICRS 776
                 7******99986 PP

  == domain 5  score: 0.8 bits;  conditional E-value: 0.51
       Ank_3   2 GetpLhlAarsgnleivkfLlenkgad 28 
                 G+t+Lh+    g  +++ +L++    d
  KHJ35297.1 813 GNTLLHIINDPGVANRILLLCD---TD 836
                 9*****8777776655555555...44 PP

  == domain 6  score: 10.3 bits;  conditional E-value: 0.00039
       Ank_3   4 tpLhlAarsgnleivkfLlenkgadvn 30 
                 tpL++A ++g+le+++ L+    +d++
  KHJ35297.1 846 TPLMVASKYGRLELIRVLFGDQRIDLH 872
                 9*****************998888876 PP

  == domain 7  score: 2.9 bits;  conditional E-value: 0.11
       Ank_3    6 LhlAarsgnleivkfLle 23  
                  +h A++s++ +i+ +Ll 
  KHJ35297.1 1134 FHSAVLSIHNTIISMLLA 1151
                  699*************98 PP

>> Ank  Ankyrin repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.0      0.01        23       2      22 ..     654     674 ..     653     681 .. 0.90
   2 ?   -1.9   0.0       2.5   5.5e+03       2      22 ..     693     713 ..     692     724 .. 0.75
   3 ?   -1.8   0.0       2.4   5.3e+03       1      10 [.     765     774 ..     765     787 .. 0.76
   4 !    6.0   1.1    0.0079        18       2      31 ..     813     841 ..     812     842 .. 0.73
   5 !    9.1   0.0    0.0008       1.8       3      29 ..     845     873 ..     844     876 .. 0.78
   6 ?   -3.3   0.3         7   1.6e+04       8      22 ..    1136    1150 ..    1135    1159 .. 0.59

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.01
                 SBBHHHHHHHHTTHHHHHHHH CS
         Ank   2 GnTPLHlAatngkkriiklLL 22 
                 G + L++A++n++++++++LL
  KHJ35297.1 654 GESILMMAVQNKQPECLEYLL 674
                 7889****************9 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.5
                 SBBHHHHHHHHTTHHHHHHHH CS
         Ank   2 GnTPLHlAatngkkriiklLL 22 
                 G T L  A++ g+ + ik +L
  KHJ35297.1 693 GTTLLSAAVQLGQNNLIKIIL 713
                 889999999777666888765 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 2.4
                 TSBBHHHHHH CS
         Ank   1 dGnTPLHlAa 10 
                 +G TPL   +
  KHJ35297.1 765 NGQTPLFAIC 774
                 7*****8645 PP

  == domain 4  score: 6.0 bits;  conditional E-value: 0.0079
                 SBBHHHHHH.HHTTHHHHHHHH.TTTSTTCBT CS
         Ank   2 GnTPLHlAa.tngkkriiklLL.hGAnlnald 31 
                 GnT LH+ +  +g ++ i  LL +  ++na++
  KHJ35297.1 813 GNTLLHI-InDPGVANRI--LLlCDTDVNATN 841
                 9******.8566625566..444788****98 PP

  == domain 5  score: 9.1 bits;  conditional E-value: 0.0008
                 BBHHHHHHHHTTHHHHHHHH..TTTSTTC CS
         Ank   3 nTPLHlAatngkkriiklLL..hGAnlna 29 
                 +TPL++A+ +g ++ i+ L   ++ +l+a
  KHJ35297.1 845 FTPLMVASKYGRLELIRVLFgdQRIDLHA 873
                 8**********999999875433566766 PP

  == domain 6  score: -3.3 bits;  conditional E-value: 7
                  HHH...HHTTHHHHHHHH CS
         Ank    8 lAa...tngkkriiklLL 22  
                   A+   +n    ii++LL
  KHJ35297.1 1136 SAVlsiHNT---IISMLL 1150
                  555555444...999999 PP

>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.1   8.1e-06     0.018      33     111 ..     940    1019 ..     922    1021 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 8.1e-06
                  SEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSST.SGSSSSSCTTSHHHHHHHHHHHHHHHHHHHTSCHHHHSHHHHHHHH CS
          PX   33 kewtvkRrYsdFeeLhskLlrkfprvkiPplPk.kvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrnsevlteFLe 111 
                  +  t++R+  dF +L + L  + p++ +P++ + +++f+   k ++++++  +  L+++L+ ll+h+ ++  e+l eF+ 
  KHJ35297.1  940 TITTCRRSLTDFNHLANLLALENPASWLPSISRmRNPFQLISKPSKAILRDIQIRLDSFLKILLSHSTFSTHEMLWEFFL 1019
                  45678999**********************988345666669999*********************************95 PP

>> WcbI  Polysaccharide biosynthesis enzyme WcbI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.0   0.00041      0.92     104     190 ..     260     347 ..     249     353 .. 0.85
   2 ?    1.2   0.0       0.1   2.3e+02     136     187 ..     775     825 ..     760     831 .. 0.86
   3 ?    0.5   0.1      0.18     4e+02     152     193 ..    1041    1081 ..    1030    1092 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00041
        WcbI 104 ldpplvdYhdlrllaaaarglsaeeavalfrr.dvfsaegvralaeaslaelrrreaahdvdlsdlleewsrrgqlmhtinHPgnavl 190
                 +++   + h+   + ++ +  ++e++++   + +v+sa +++++++++   l     + + ++ + l e++  +q+  +i HP+   l
  KHJ35297.1 260 VPNFRLNTHSGQSVIQVLDSEDEEQIMRSALEtAVTSAIDLFQMVDKQQLSLLGATTDLTGPIVERLIERYVTEQVHESILHPRLCAL 347
                 555566667788888888889999999999999**************************999999999999999*********97655 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.1
        WcbI 136 dvfsaegvralaeaslaelrrreaah.dvdlsdlleewsrrgqlmhtinHPgn 187
                 + +++ ++r ++e++la   +++++  ++ l+d++++ ++   l h in Pg 
  KHJ35297.1 775 RSYDHRDYRLMVENALAVAMASQDNGePLYLDDHVDAKGNT--LLHIINDPGV 825
                 5688999**********99999998857********99999..******9986 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.18
        WcbI  152 aelrrreaah.dvdlsdlleewsrrgqlmhtinHPgnavlldl 193 
                  ++ r++++ + d++  + + ++ r+  +++++nH  ++v ++ 
  KHJ35297.1 1041 EKVREEFEPVeDIRDVEQFVDHARD--MVRSVNHTTKSVARRA 1081
                  5556666655467777888899***..********99998765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       911  (0.0508115); expected 358.6 (0.02)
Passed bias filter:                      659  (0.0367561); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.88u 0.28s 00:00:01.16 Elapsed: 00:00:00.42
# Mc/sec: 9475.43
//
Query:       KHJ35298.1  [L=412]
Description: putative glycoside hydrolase family 16 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.7e-37  126.1   0.8    9.7e-37  126.1   0.8    1.6  2  Glyco_hydro_16  Glycosyl hydrolases family 16


Domain annotation for each model (and alignments):
>> Glyco_hydro_16  Glycosyl hydrolases family 16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.1   0.8   5.4e-41   9.7e-37      12     176 ..      62     229 ..      51     230 .. 0.86
   2 ?   -2.5   0.1      0.16   2.9e+03      24      44 ..     371     395 ..     350     400 .. 0.50

  Alignments for each domain:
  == domain 1  score: 126.1 bits;  conditional E-value: 5.4e-41
                     GGEEEETTSEEEEEEEEEE.EEEEEECCEESSEEEEEEEE---STTEEEEEEEETGGTSTTEEEEEEEETT-TTEEEEEEEBTTBSGE...EEEE CS
  Glyco_hydro_16  12 savsvengetltltldkes.gsrikskksflyGkvearikaaksaGvvtafylssedekahdEiDiEflGndtgkvqtnvygkGkgkr...ekrl 102
                     ++ +++++++++++++  + ++++  +k++++G+ve+ +k + ++G++++f+l s   ++ dEiD+E+lG d+++vqtn++gkG++++     +l
      KHJ35298.1  62 TTTTYDSNTGAQFSIKAGTdAPTMVMTKHIMFGRVEMVAKSSPGTGIISSFVLLS---QDLDEIDWEWLGGDNNNVQTNFFGKGDTSSydrGATL 153
                     445566667889999987778899999**************************99...89**************************975423333 PP

                     ETSS-TTTS-EEEEEEEETTEEEEEETTEEEEEEESSHHH.HT...--EESEEEEEEEEEEBS.HHHSSE-EEEEEEE CS
  Glyco_hydro_16 103 slwfdptedfHtYaieWtpdkikfyVDgkpvrtltkkeae.ev.k.yPqftpmkvavslwpgs.dwateqgkvkidwa 176
                     + ++ p + fH+Y+i+Wt ++i + +D++p+rt++ ++   ++ + yPq tpmkv+++ w g  d +++q++ + +wa
      KHJ35298.1 154 P-VKTPIDTFHKYTIDWTAERILWEIDDNPIRTVNFNDPLtKGgSiYPQ-TPMKVKIGSWIGClDASNPQTSGTCQWA 229
                     3.89*******************************999884445448**.************9988888888889997 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.16
                     EEEEEEEEEEEEE....CCEESSEE CS
  Glyco_hydro_16  24 ltldkesgsriks....kksflyGk 44 
                     ++++ +s+++ +s    k +  yG+
      KHJ35298.1 371 MKTNTSSSATTTSnangKLKHNYGT 395
                     3333333333333333355555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (412 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       619  (0.0345251); expected 358.6 (0.02)
Passed bias filter:                      348  (0.0194099); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.21s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 3266.46
//
Query:       KHJ35299.1  [L=322]
Description: putative dna repair protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.9e-06   26.8   1.2    5.9e-06   26.2   0.0    2.0  2  Complex1_LYR  Complex 1 protein (LYR family)


Domain annotation for each model (and alignments):
>> Complex1_LYR  Complex 1 protein (LYR family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   3.3e-10   5.9e-06       3      54 ..      19      76 ..      17      78 .. 0.93
   2 ?   -3.3   0.4      0.54   9.6e+03      31      38 ..     311     318 ..     295     318 .. 0.66

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 3.3e-10
  Complex1_LYR  3 vLsLYRalLRearkfpdyn......treyfrrriRdeFrknkhvtDpekieellkkgr 54
                  + +LY alL+ ++k+p ++          +r+ iR++Fr+n +  +p+ i++ lk g+
    KHJ35299.1 19 CKALYHALLKPCNKIPLPSnfpvrgRVNPIRHLIRKRFRQNIKSDSPKLIRKGLKIGY 76
                  789*******************99889999*********************9999887 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 0.54
  Complex1_LYR  31 RdeFrknk 38 
                   +++F++nk
    KHJ35299.1 311 QQMFDENK 318
                   56777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (322 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1550  (0.0864521); expected 358.6 (0.02)
Passed bias filter:                      595  (0.0331865); expected 358.6 (0.02)
Passed Vit filter:                        68  (0.00379274); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.23s 00:00:00.71 Elapsed: 00:00:00.37
# Mc/sec: 2616.91
//
Query:       KHJ35300.1  [L=1122]
Description: hypothetical protein EV44_g0050 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      300  (0.0167327); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.71u 0.25s 00:00:00.96 Elapsed: 00:00:00.40
# Mc/sec: 8373.90
//
Query:       KHJ35301.1  [L=1691]
Description: putative endosomal peripheral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.1e-42  144.2   9.5    3.5e-42  144.1   4.3    3.3  3  DCB       Dimerisation and cyclophilin-binding domain of Mon2
    6.2e-42  143.2   1.3    6.2e-42  143.2   1.3    3.8  4  Sec7_N    Guanine nucleotide exchange factor in Golgi transpo
    1.2e-23   83.3   2.8    1.2e-23   83.3   2.8    4.6  5  Mon2_C    C-terminal region of Mon2 protein
    3.4e-06   26.8   1.7       0.13   12.2   0.0    5.0  5  DUF1981   Domain of unknown function (DUF1981)


Domain annotation for each model (and alignments):
>> DCB  Dimerisation and cyclophilin-binding domain of Mon2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.1   4.3   7.8e-46   3.5e-42       8     178 .]       4     175 ..       1     175 [. 0.97
   2 ?   -1.5   0.0      0.39   1.7e+03     107     138 ..     872     905 ..     847     909 .. 0.71
   3 ?    0.7   0.0     0.083   3.7e+02      70     126 ..     966    1022 ..     962    1050 .. 0.75

  Alignments for each domain:
  == domain 1  score: 144.1 bits;  conditional E-value: 7.8e-46
         DCB   8 ealqsdlkalsseskrkhskvkeasekgilkLktikssseee.eqslaeaseeilkPlllacetknpkivqiaLgslqrLisheviseeaiskiietlw 105
                 ++l+s+l +l +eskrkhs++++a+ek++ +++++  +se +   +l +   ++++P++ ac+tkn+k++ ia+ +lqrL   ++++  ++++++e++ 
  KHJ35301.1   4 QVLVSELGNLVQESKRKHSDLRAAAEKSLAEVRSLWLTSEAQvAADLSQR-FNFVTPFIIACSTKNVKLTGIAIICLQRLSMSRALPRVRLKEVLEAFR 101
                 7899*******************************999976668888887.99********************************************** PP

         DCB 106 kllelgveielkvLqtllllvttss.vvhgdtlakalvlCfrLhfskdnvvqntAaAtlrQlvsvvFeRvvaed 178
                 ++ ++g++++lk+Lq+l+ l++ ++ +++g+++a +l +C  L+ sk+ +v+ntAaAtl+Qlv +vF+ vvaed
  KHJ35301.1 102 EASSAGLDVQLKILQALPFLLQNYAdDLKGELVATTLNICTVLQSSKNGIVSNTAAATLQQLVVTVFDNVVAED 175
                 ************************************************************************97 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.39
         DCB 107 llel.gveielkvLqtllllvttss.vvhgdtla 138
                 l+e+  ++++l++L t+ l+++  + + +++++a
  KHJ35301.1 872 LTESeFIDVQLRLLDTFKLALKPLEaDARDSSVA 905
                 344412569********99998777677777666 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.083
         DCB   70 tknpkivqiaLgslqrLis..heviseeaiskiietlwkllelgveielkvLqtllllv 126 
                  t++ k++  a +slq + s   + ++++    +i+tl k ++ + +  l++  t+++++
  KHJ35301.1  966 TRSGKLIRSAFNSLQLICSdfLSSLPNNCFIILIDTLSKFCSQNND--LNISLTTVTFF 1022
                  8999**********9666522345568889999*******999999..55544444444 PP

>> Sec7_N  Guanine nucleotide exchange factor in Golgi transport N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.17   7.6e+02      83     137 ..     112     173 ..      91     177 .. 0.72
   2 !  143.2   1.3   1.4e-45   6.2e-42       2     157 ..     200     352 ..     199     353 .. 0.97
   3 ?   -1.8   0.2      0.55   2.5e+03      81     116 ..    1086    1122 ..    1028    1196 .. 0.59
   4 ?   -2.6   0.2         1   4.5e+03       6      44 ..    1481    1519 ..    1479    1529 .. 0.67

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.17
      Sec7_N  83 erslrivllLlkkfrseLktEievflsllililles.......dsslwqrvlaLeilrrlcs 137
                 + +l+ +  Ll+++ + Lk E+ +    +  +l +s       ++ +  + l++ ++ ++++
  KHJ35301.1 112 LKILQALPFLLQNYADDLKGELVATTLNICTVLQSSkngivsnTAAATLQQLVVTVFDNVVA 173
                 556677778999*********88887777777743355554434444888888888887765 PP

  == domain 2  score: 143.2 bits;  conditional E-value: 1.4e-45
      Sec7_N   2 akDaflvfrdLcklinsakskpkflslaersktfsLeLlesvlsnhgdvfrkhpellqllkqklcplLlknlsespsfpvferslrivllLlkkfrseL 100
                 a Da+++f+dLc l++s+  kp fl+ + + ktf+LeL+esvl+nh ++f +hpe+ ++l+ +++p+++ +lse+ +f v++r +ri+++Ll+ ++s L
  KHJ35301.1 200 ALDAYKIFNDLCLLTESH--KPLFLKSTGIPKTFGLELIESVLTNHAEIFINHPEQANILRLRVMPFIINCLSEKLNFAVTVRNARILYTLLRFHLSIL 296
                 68************8844..59***************************************************************************** PP

      Sec7_N 101 ktEievflsllilillesdsslwqrvlaLeilrrlcsdpqllvelylnYDcdeeakn 157
                  +E e+ lsll+ +l ++d+ +w+r l++eilr+l+sd+ l++ +++ YD++e +k 
  KHJ35301.1 297 SSEAEMALSLLTYML-DHDTASWKRSLCMEILRGLFSDAALVRRVFTMYDSQEGRKP 352
                 ***************.************************************99875 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.55
      Sec7_N   81 vferslrivllLlkkfrseLktE.ievflsllilill 116 
                  +   +++++l +l  f ++L  E  ++ l+ +++ ll
  KHJ35301.1 1086 LRKSAIQTLLRVLDAFGDQLSPEaWSICLESIVFKLL 1122
                  3333344444444444444444422334444433333 PP

  == domain 4  score: -2.6 bits;  conditional E-value: 1
      Sec7_N    6 flvfrdLcklinsaks...kpkflslaersktfsLeLlesvl 44  
                  fl +rdL++l+  +++   + +  +++  + +f + L++  +
  KHJ35301.1 1481 FLTLRDLITLAL-GSTklsDDT--RQKYAQSLFHMSLIHEKI 1519
                  899*******75.443343122..567777777777776555 PP

>> Mon2_C  C-terminal region of Mon2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.1      0.14   6.1e+02     374     426 ..     116     165 ..     110     191 .. 0.80
   2 !   83.3   2.8   2.6e-27   1.2e-23       2     230 ..     985    1209 ..     984    1221 .. 0.83
   3 !    2.3   0.4     0.008        36     328     416 ..    1251    1334 ..    1235    1345 .. 0.76
   4 !    9.5   1.7   5.4e-05      0.24     463     591 ..    1354    1486 ..    1338    1491 .. 0.77
   5 ?    1.5   0.1     0.014        63     687     775 ..    1584    1681 ..    1571    1687 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.14
      Mon2_C 374 davpyilssvsealltslqeavldalellqkeatkpdshisqlipaifrqlli 426
                 +a p++l  +++ l   l  + l+   +lq +    +  +s+  +a ++ql++
  KHJ35301.1 116 QALPFLLQNYADDLKGELVATTLNICTVLQSSK---NGIVSNTAAATLQQLVV 165
                 5889***********999999999999999766...55566666666666654 PP

  == domain 2  score: 83.3 bits;  conditional E-value: 2.6e-27
      Mon2_C    2 dfltvmpwrclqlvvdvaakfglqtqelnisltaigllwnisdyffqkeeklq.sk...ql.eekavlpefpatvklpqfdklwlclyaklgelcvd 93  
                  dfl+ +p +c+ + +d+ +kf +q+++lnislt++ ++w+isd++  k ++   s    q+ ++++ +    +         lw+ l  +l  +  d
  KHJ35301.1  985 DFLSSLPNNCFIILIDTLSKFCSQNNDLNISLTTVTFFWDISDFISGKADTFSlSSdliQAsKNQSFIEIIESNDLETSKAALWMLLLLRLAAVTTD 1081
                  9*********************************************988764313311122133444444444444455678*************** PP

      Mon2_C   94 lrpavrksagqtlfstisahgsllnpstwqalvwkvlfnlldrvrelsssadkekvea.sgnilihhsrdtaekqwaetqvltlagvarvfntkrel 189 
                   r  +rksa qtl+  + a g  l p +w   +  ++f+ll  + e          +  +g  l     d  +  w et vl l+g++ ++    ++
  KHJ35301.1 1082 NRLELRKSAIQTLLRVLDAFGDQLSPEAWSICLESIVFKLLLSIIER------LNFDNfAGISL----SDMDKEGWYETTVLILTGLTNLLADYLDV 1168
                  ****************************************9877554......44555233322....4677889********************** PP

      Mon2_C  190 lqmlgdferawdlllefiqsaalsknnevslaalkslqeil 230 
                  l     f++aw+ l+e+ ++    k   +  a +k+l+++l
  KHJ35301.1 1169 LSKSNSFKKAWKTLIEYFDTLLQFKVLSIDTAIFKALRKLL 1209
                  *****************999888888888888888887776 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.008
      Mon2_C  328 psqafltaliqifpalyqhikvkfsmddldklgvvltsavsvpvssdavpyilssvsealltslqeavldalellqkeat.kpdshisql 416 
                    q  l a i ++  +y+ i+ +++ + ++ +  +l+ a    v+   v   l s     ltslq  vl+ l++++ +    p + isq+
  KHJ35301.1 1251 CNQDCLLAYITVLQEIYRLIQSRLEASHVEVMLSLLRIA----VQHANVE--LYSADIDHLTSLQTEVLNILKIIRTDIKgVPAAMISQV 1334
                  5788999******************99998777777655....5554444..333444469**************998742477778876 PP

  == domain 4  score: 9.5 bits;  conditional E-value: 5.4e-05
      Mon2_C  463 alnyvpfaekslevvvdlyqktateesvvqeqilhdivkalrvplalkykcl..sest..wklavssllkvlsiglkvar.aksq..kfdslwdela 552 
                     yv +++ s+ v  dl  k + + ++     +   ++al  p+ +ky+    s++t  wk a s  +++l+  ++    ak q    +slw  + 
  KHJ35301.1 1354 RPTYVALSKASMIVLEDLIVKHSSDFNIYLTGAISASLEALAKPIRIKYSFSitSKTTasWKQATSCAISILKSIVPFIInAKLQddIEQSLWSSIV 1450
                  5579999999**9999**9999999999999999999***********985411433344************988875433655411568*****99 PP

      Mon2_C  553 dtledflftksvctiedlsleeivldesidvevvellrd 591 
                  +  + + +   +   + +   +i  de  d+e    lrd
  KHJ35301.1 1451 KISDGI-IRVDI--QDTKETTNIESDEKFDIESFLTLRD 1486
                  876665.45556..6778888899999999987766665 PP

  == domain 5  score: 1.5 bits;  conditional E-value: 0.014
      Mon2_C  687 vllkrsqevlkryiederlsgkcplprfrlseiifvlkavatlv...vslkkaqaekvdkn....awdqlialyptlveci..ttsssevsralkea 774 
                   l+ r    ++ yi d+ l g  p p  +  e+ ++l+a+  l    +++k    + ++ +      + l+ lyp lv  +  ++   ev ++l  a
  KHJ35301.1 1584 YLILRAGLTIQAYIVDQPLRGMIPQPLTQRKELLYILRALIDLRcepEAIKVESESGIKSDicigEKKHLVKLYPLLVMALrvAVRDQEVLSCLAMA 1680
                  566677778899***************************9888522245666555555544111145789999999998751144567888888777 PP

      Mon2_C  775 l 775 
                  l
  KHJ35301.1 1681 L 1681
                  6 PP

>> DUF1981  Domain of unknown function (DUF1981)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.0      0.38   1.7e+03      16      81 ..      95     159 ..      94     173 .. 0.66
   2 !    8.2   0.0   0.00049       2.2      36      67 ..     658     689 ..     652     709 .. 0.80
   3 ?   -3.9   0.0         3   1.3e+04      54      72 ..     828     847 ..     828     858 .. 0.58
   4 !   12.2   0.0   2.8e-05      0.13      24      67 ..     904     947 ..     889     980 .. 0.79
   5 ?    0.1   0.0      0.16   7.3e+02      46      65 ..    1169    1188 ..    1160    1201 .. 0.87

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.38
     DUF1981  16 efLkPFeeimsnnssaeirelvlecveqliqsraeniksG.Wktifgvltaaakeeneslvrlafqi 81 
                 e+L+ F e +s     +++ ++l+ +  l+q+ a+ +k     t ++++t+  +++n  + ++a  +
  KHJ35301.1  95 EVLEAFREASS--AGLDVQLKILQALPFLLQNYADDLKGElVATTLNICTVLQSSKNGIVSNTAAAT 159
                 66777777764..667788888888888888888888643145666666666666665555555554 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00049
     DUF1981  36 lvlecveqliqsraeniksGWktifgvltaaa 67 
                 l+l+ + +l  + + ++ sGW +i+g l++a 
  KHJ35301.1 658 LCLRALLNLGIALGPTLDSGWAIILGTLQHAE 689
                 578888888888999*************9986 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 3
     DUF1981  54 sGWktifgvltaaa.keene 72 
                 sGW +i + l  aa +  + 
  KHJ35301.1 828 SGWDPITSELINAAySRASS 847
                 89999987554444143333 PP

  == domain 4  score: 12.2 bits;  conditional E-value: 2.8e-05
     DUF1981  24 imsnnssaeirelvlecveqliqsraeniksGWktifgvltaaa 67 
                 + ++  + ++ ++ le +++++++++++  sGW+++f +++ + 
  KHJ35301.1 904 VAAHVADIDVHKIFLEGLKSFLENCGNTSVSGWNVVFFIIGSVF 947
                 557788999******************************99876 PP

  == domain 5  score: 0.1 bits;  conditional E-value: 0.16
     DUF1981   46 qsraeniksGWktifgvlta 65  
                   s++++ k +Wkt+++ + +
  KHJ35301.1 1169 LSKSNSFKKAWKTLIEYFDT 1188
                  688999********998876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1691 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       692  (0.0385967); expected 358.6 (0.02)
Passed bias filter:                      472  (0.0263261); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.95u 0.27s 00:00:01.22 Elapsed: 00:00:00.42
# Mc/sec: 12231.39
//
Query:       KHJ35302.1  [L=224]
Description: putative cia30 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-41  141.9   0.5    2.1e-41  141.6   0.5    1.1  1  CIA30     Complex I intermediate-associated protein 30 (CIA30


Domain annotation for each model (and alignments):
>> CIA30  Complex I intermediate-associated protein 30 (CIA30)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  141.6   0.5   1.2e-45   2.1e-41       8     159 ..      13     168 ..       6     169 .. 0.96

  Alignments for each domain:
  == domain 1  score: 141.6 bits;  conditional E-value: 1.2e-45
       CIA30   8 sldkwtllsDrvmGGvStaslklskkdktalFsGnlstelinrgGFasvrtkkrkrkldlssyegleLrvk.GDgrkYklnlktesk..eqsglsyqad 103
                 s+++wt+++D+v+GG+S++s+k+ +++++a+FsG l+  +++++GFas+rtk ++r +dls+y+g+ L++k +Dg+kY++ lk++ +  +qs++s+  +
  KHJ35302.1  13 SSRDWTSSNDTVRGGKSSSSFKFIESNSVAIFSGYLDVSTLGGAGFASQRTKGNDRVWDLSNYDGIVLNIKkADGKKYTFSLKDQVVapTQSSISWDFN 111
                 6789*******************************************************************9*************889999******** PP

       CIA30 104 fetkkgewetvkipfsdfvptfrGrvvedqeeldlskiksigllls...dkqegpfeLe 159
                 f t+++  e+vki +sd+ pt+rGrv+ed ++l+l++i+ ++l+++   ++qeg f L+
  KHJ35302.1 112 FITTGD--EQVKIFWSDLEPTYRGRVLEDTTPLNLKEIRGFSLMMRsffGFQEGRFALS 168
                 *99777..7*************************************99999******97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       336  (0.0187406); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1638.07
//
Query:       KHJ35303.1  [L=275]
Description: putative suppressor protein srp40 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0063   16.5   0.0      0.014   15.4   0.0    1.5  1  DbpA      DbpA RNA binding domain


Domain annotation for each model (and alignments):
>> DbpA  DbpA RNA binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.4   0.0   7.7e-07     0.014      39      71 ..      58      90 ..      56      91 .. 0.95

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 7.7e-07
                SS-EEEEE-TT-HHHHHHHHTT--SSS----EE CS
        DbpA 39 dkfSfvevpkekaeevlkalkkkkikGrkvrve 71
                +++ f+e+p+ +ae++ k+l++  ik+ kvr+e
  KHJ35303.1 58 NNYGFIELPRTDAERIRKKLHGSIIKNVKVRIE 90
                5899****************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (275 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       572  (0.0319036); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2118.04
//
Query:       KHJ35304.1  [L=87]
Description: hypothetical protein EV44_g3483 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (87 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       162  (0.00903564); expected 358.6 (0.02)
Passed bias filter:                      149  (0.00831056); expected 358.6 (0.02)
Passed Vit filter:                         9  (0.00050198); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.22s 00:00:00.56 Elapsed: 00:00:00.37
# Mc/sec: 706.87
//
Query:       KHJ35305.1  [L=532]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.18   11.3   0.4       0.81    9.2   0.0    2.0  2  Mak10     Mak10 subunit, NatC N(alpha)-terminal acetyltransfe
        2.8    7.7   5.3        5.9    6.7   5.3    1.5  1  PocR      Sensory domain found in PocR


Domain annotation for each model (and alignments):
>> Mak10  Mak10 subunit, NatC N(alpha)-terminal acetyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   0.0     9e-05      0.81      42      98 ..      44      98 ..      29     149 .. 0.71
   2 ?   -0.8   0.2       0.1   9.1e+02      81     111 ..     207     237 ..     201     244 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 9e-05
       Mak10 42 fdvsapllpeevlgimdrllasemaWhsgssLsqTvftclYveklllpspkalkeak 98
                 ++s ++lp e+ +i+    ++e aWh+  s+  ++f+ +  ++ l  +++++++++
  KHJ35305.1 44 TNFSHDYLPRELANIIAARQRQERAWHNRLSICASIFSNI--DSTLATYKEDIEKQE 98
                46788999******************************85..444444444444444 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.1
       Mak10  81 lYveklllpspkalkeakfsrkedeekekte 111
                 ++ ++l +p++++ +++k+++k+++++e+++
  KHJ35305.1 207 RHQHHLPNPQHQNRENNKTKNKKTSQNENKP 237
                 6788998888888888887665555454444 PP

>> PocR  Sensory domain found in PocR
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   5.3   0.00066       5.9      15      79 ..     356     424 ..     350     426 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.00066
        PocR  15 fseatglaivivdtdg.epltepsnftdfCklvrstp..egrkrCrksdarggeeavksgkpyiykC.h 79 
                 fs++ ++++ ++d  g +++ +++++ +fCk +  ++  ++++r  ++ + g+ +++++      kC +
  KHJ35305.1 356 FSDVSRVGFRVFDESGvTKIFKKKQPIEFCKRCNGHHntKTCSRAPSCGNCGSTMHAQEACKALTKCrN 424
                 9*************887899****999***888665545888888889999998888888888888844 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (532 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1588  (0.0885716); expected 358.6 (0.02)
Passed bias filter:                      575  (0.0320709); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.44
# Mc/sec: 3626.20
//
Query:       KHJ35306.1  [L=612]
Description: putative mst3-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-68  230.3   0.0    3.8e-68  229.7   0.0    1.3  1  Pkinase         Protein kinase domain
    1.2e-46  159.2   0.0    1.8e-46  158.5   0.0    1.3  1  Pkinase_Tyr     Protein tyrosine kinase
    3.3e-06   26.2   0.2    1.5e-05   24.0   0.0    2.0  2  Pkinase_fungal  Fungal protein kinase
     0.0035   16.7   0.0      0.018   14.3   0.0    2.1  2  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.011   16.0   0.0      0.038   14.2   0.0    1.9  1  RGCC            Response gene to complement 32 protein family
      0.074   13.2   0.0       0.18   12.0   0.0    1.6  1  ABC1            ABC1 family


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  229.7   0.0   1.3e-71   3.8e-68       1     264 []      13     264 ..      13     264 .. 0.93

  Alignments for each domain:
  == domain 1  score: 229.7 bits;  conditional E-value: 1.3e-71
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                 y++l++lG+GsfG+Vyka+ek+tg+ vA+K+i+ e+ +++   ++++Ei++l ++ +p++ +++ +f + ++l++v+ey+ gg+  dll+  g ++e +
  KHJ35306.1  13 YNVLQELGSGSFGTVYKAIEKKTGEVVAIKHIDLESSEDDI-AEIQQEISVLSTCASPYVTQYKTSFLRGHKLWIVMEYLGGGSCLDLLK-PGPFNEGH 109
                 7889*******************************999977.59*********************************************7.699***** PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-ST CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppf 197
                 +  i++++l gl+ylH++g iHrD+K +N+L++++g++K++DFG+a++l++ ++  ++fvgt+ ++APEv+++ +y+  +D+WslG++ +el+ g+pp 
  KHJ35306.1 110 IAIICRELLFGLDYLHKEGKIHRDIKAANVLLSTSGKVKLADFGVAAQLTNIKSqRNTFVGTPFWMAPEVIQQAGYDFRADIWSLGITAIELIHGEPPN 208
                 *************************************************998877******************************************** PP

                 TTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 198 sgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 +           ++ ++ ++ i +       e s+ s+e+kd++ ++l+kd  kR+ta++ll+h+++
  KHJ35306.1 209 A----------AIHPMKVLFLIPKA-PAPHLEGSNYSKEFKDFVAQCLTKDCDKRPTAKDLLKHKFI 264
                 *..........56665555555432.3444566788*****************************96 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.5   0.0   6.1e-50   1.8e-46       3     257 ..      15     260 ..      13     262 .. 0.94

  Alignments for each domain:
  == domain 1  score: 158.5 bits;  conditional E-value: 6.1e-50
                  EEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTS CS
  Pkinase_Tyr   3 lgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateeekeelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkekekl 100
                  + ++lG+G+fG+V+++  k    k+ + Va+K ++ e++e++ +e+ +e+++++++  p + ++    +++++l+iv+ey+ gG+ l+ L+     ++
   KHJ35306.1  15 VLQELGSGSFGTVYKAIEK----KTGEVVAIKHIDLESSEDDIAEIQQEISVLSTCASPYVTQYKTSFLRGHKLWIVMEYLGGGSCLDLLKPG---PF 105
                  5689*************99....89999**************************************************************987...** PP

                  BHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHHHH CS
  Pkinase_Tyr 101 tlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllwEi 198
                  +  ++  ++ ++  G++yL+++  +Hrd+ a NvLls++ +vk++DfG+a ++  ++  +++++      WmapE++++  +  ++D+Ws G++ +E+
   KHJ35306.1 106 NEGHIAIICRELLFGLDYLHKEGKIHRDIKAANVLLSTSGKVKLADFGVAAQL--TNIKSQRNTFVGTPFWMAPEVIQQAGYDFRADIWSLGITAIEL 201
                  *****************************************************..444455555667789**************************** PP

                  HTTSSGTTTTSHHHHHHHHH.HTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 199 ftlgespypglkneevlekl.kegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  +  ge p + +++++vl  + k+     + ++ ++e+++++ +c+++d ++Rpt ++l++
   KHJ35306.1 202 IH-GEPPNAAIHPMKVLFLIpKAPAPHLEGSNYSKEFKDFVAQCLTKDCDKRPTAKDLLK 260
                  *9.*****************777788889999***********************99976 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.0   0.0   4.9e-09   1.5e-05     318     399 ..     120     193 ..     112     194 .. 0.88
   2 ?   -1.5   0.6      0.27   7.9e+02     254     282 ..     374     414 ..     315     501 .. 0.42

  Alignments for each domain:
  == domain 1  score: 24.0 bits;  conditional E-value: 4.9e-09
  Pkinase_fungal 318 ghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHsyrhDLES 399
                     g+  L+ k g +HrDi + N+l+       + k  L+D+ +a +l +   +s++++ +GT+ +ma ev+++    +r D+ S
      KHJ35306.1 120 GLDYLH-KEGKIHRDIKAANVLLS-----TSGKVKLADFGVAAQLTN--IKSQRNTFVGTPFWMAPEVIQQAGYDFRADIWS 193
                     677899.99999************.....678999***********5..6677789**************999999999865 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.27
  Pkinase_fungal 254 vklkksesskkvekrsvdssv.stskrsr................l 282
                     +k+++++  + +++++v++++                         
      KHJ35306.1 374 IKSTSRRQASITRQSTVNKDQqA-----LsgqrslqpdlsfgntgS 414
                     22222222222222222222211.....011112333333334441 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.4   0.0       0.4   1.2e+03      19      60 ..      18      57 ..      12      84 .. 0.73
   2 !   14.3   0.0   6.1e-06     0.018     158     244 ..     122     202 ..     100     217 .. 0.70

  Alignments for each domain:
  == domain 1  score: -1.4 bits;  conditional E-value: 0.4
  Kinase-like 19 llkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlk 60
                  l+ g ++ v+++ +++tge +a+k   l+   s+ d+ +++
   KHJ35306.1 18 ELGSGSFGTVYKAIEKKTGEVVAIKHIDLE--SSEDDIAEIQ 57
                 578899999***********9999876554..4555555554 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 6.1e-06
  Kinase-like 158 anLqakglvhgkftvdnllldekgglmlggfta...Lvragtkvvlseve.kgfaPpEllgsrggytrknktkmthkldaWqlGlviyriw 244
                   +L+++g +h ++++ n+ll   g+++l +f+    L   + +     v    +  pE++ +         + + +  d W lG+++  + 
   KHJ35306.1 122 DYLHKEGKIHRDIKAANVLLSTSGKVKLADFGVaaqLTNIKSQRN-TFVGtPFWMAPEVIQQ---------AGYDFRADIWSLGITAIELI 202
                  69****************************985111333333332.2333122345566555.........66789999999999987665 PP

>> RGCC  Response gene to complement 32 protein family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   1.3e-05     0.038      23      75 ..     518     574 ..     503     578 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.3e-05
        RGCC  23 aeaddLsdvLcefdavledfesPvek....rhfrYeehLkelkrrssasvsDsGisd 75 
                 +++ +Ls +Lc   +v++   +P++        + + hLk   rr s+ vsDsG+++
  KHJ35306.1 518 QSDSKLSTILCPSPKVVKPQVTPAKAptklVMAQNNPHLKSHHRRHSHVVSDSGLKE 574
                 4567899999999999987766665411114567889*****************987 PP

>> ABC1  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   6.1e-05      0.18      19      42 ..      19      43 ..       5      79 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 6.1e-05
        ABC1 19 iAaASiaqVhrAklk.sgeeVavKv 42
                ++++S+++V++A  k +ge Va+K 
  KHJ35306.1 19 LGSGSFGTVYKAIEKkTGEVVAIKH 43
                89**********98879*****994 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (612 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       660  (0.0368119); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.60u 0.25s 00:00:00.85 Elapsed: 00:00:00.40
# Mc/sec: 4581.76
//
Query:       KHJ35307.1  [L=609]
Description: putative vacuolar atp synthase catalytic subunit a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   2.3e-110  367.3   0.1   4.5e-110  366.3   0.0    1.6  2  ATP-synt_ab      ATP synthase alpha/beta family, nucleotide-b
    1.3e-46  157.4   0.0    2.9e-46  156.3   0.0    1.6  1  ATP-synt_ab_Xtn  ATPsynthase alpha/beta subunit N-term extens
    2.6e-15   56.7   4.2    5.2e-15   55.7   4.2    1.5  1  ATP-synt_ab_N    ATP synthase alpha/beta family, beta-barrel 


Domain annotation for each model (and alignments):
>> ATP-synt_ab  ATP synthase alpha/beta family, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  366.3   0.0  7.6e-114  4.5e-110       1     213 []     228     453 ..     228     453 .. 0.98
   2 ?   -3.0   0.0       0.8   4.8e+03     101     131 ..     546     576 ..     545     579 .. 0.79

  Alignments for each domain:
  == domain 1  score: 366.3 bits;  conditional E-value: 7.6e-114
                  SSHHHHHHS-EBTT-EEEEEESTTSSHHHHHHHHHHHSSTSSEEEEEEESEEHHHHHHHHHHCHH........SS.GGGGEEEEEEETTS-HHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xx.xxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab   1 GirvlDalfpivqGqrtlipgafgvGktvisqslskqsnsddaiiyvgiGergnevaevleefpe........gt.imkrtvlvantsnepvaareas 89 
                  G+rvlDalfp vqG++++ipgafg+Gktvisqs+sk snsd +i+yvg+Gergne+aevl++fpe        ++ imkrt+l+antsn+pvaareas
   KHJ35307.1 228 GQRVLDALFPSVQGGTVAIPGAFGCGKTVISQSVSKFSNSD-IIVYVGCGERGNEMAEVLMDFPElsidingrKEpIMKRTTLIANTSNMPVAAREAS 324
                  9****************************************.**************************99876337********************** PP

                  HHHHHHHHHHHHHTTSEEEEEEETHHHHHHHHHHHHHHTTTSBEGGGSBTTHHHHHHHHHTTSEEE.....TSSEEEEEEEEEEE-GGCSTTSHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab  90 iytgitlAEyfrdqgknvlliadslsrwaeAlreislrlgempadqgypaylgaklaslyERagka.....pdrtGsvtivaavspaggDfsdpvtta 182
                  iytgit+AEyfrdqgk+v ++ads+srwaeAlreis+rlgempadqg+paylgaklas+yERagk+     p+r+Gsv+iv avsp+ggDfsdpvt+ 
   KHJ35307.1 325 IYTGITVAEYFRDQGKDVAMMADSSSRWAEALREISGRLGEMPADQGFPAYLGAKLASFYERAGKVqalgsPNREGSVSIVGAVSPPGGDFSDPVTSS 422
                  ***********************************************************************99************************* PP

                  HHHHSSEEEEB-HHHHHTTBSSSBCTTTEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab 183 tlgitdgfivLdkklaqrkhfPainvlvSvS 213
                  tlgi+++f++LdkklaqrkhfP+in++vS+S
   KHJ35307.1 423 TLGIVQVFWGLDKKLAQRKHFPSINTSVSYS 453
                  ******************************9 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 0.8
                  HHTTSEEEEEEETHHHHHHHHHHHHHHTTTS CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  ATP-synt_ab 101 rdqgknvlliadslsrwaeAlreislrlgem 131
                   d+ ++++    s s+  eA  e+  rl++m
   KHJ35307.1 546 HDEAQKAIAQGQSWSKVREATSELQSRLRNM 576
                  5666666677789999999****99999988 PP

>> ATP-synt_ab_Xtn  ATPsynthase alpha/beta subunit N-term extension
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.3   0.0   4.9e-50   2.9e-46       1     121 []      98     219 ..      98     219 .. 0.99

  Alignments for each domain:
  == domain 1  score: 156.3 bits;  conditional E-value: 4.9e-50
                      EETTS-BHHHHHHHHTS.BE-TT----SS-SSS-EEEEESS-TT-EEETT-EEEEEECTTCE.EEEEE--TT-EEEEEEE--EEEE-TTSECEE CS
  ATP-synt_ab_Xtn   1 yDGiqrpLekiaeksgs.fierGvkvpaldrekkwefkpkvkvgdkvsggdilGtvqeteli.ehkimvppkvegkvkeiaeegeytvedtiae 92 
                      yDGiqrpL++iae+s+s +i+rG+ +paldr+k+w f+p ++vgd+++ggdi+G+v e++l+ +hki++pp+++g++++iae+g+y+v+++i+e
       KHJ35307.1  98 YDGIQRPLKSIAESSNSiYIPRGIAAPALDRTKEWAFTPLMEVGDHITGGDIWGSVYENSLLsDHKILLPPRAHGTITRIAEKGNYKVDQKILE 191
                      9*************************************************************99****************************** PP

                      ECETT.ECEEEESSEEEETTS---ESEEE CS
  ATP-synt_ab_Xtn  93 veteegkekeltllqkwPvrkprpvkekl 121
                      ve+++ k++e++++++wPvr prp++ekl
       KHJ35307.1 192 VEFDG-KKTEYSMMHTWPVRVPRPTSEKL 219
                      **998.7********************97 PP

>> ATP-synt_ab_N  ATP synthase alpha/beta family, beta-barrel domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   4.2   8.7e-19   5.2e-15       1      69 []      20      82 ..      20      82 .. 0.98

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 8.7e-19
                   EEEEETTEEEEESSTSCETCTTEEEEECCETCSTEEEEEEEEEETTEEEEEESS-STTBBTTSEEEEES CS
  ATP-synt_ab_N  1 ivqviGpvvdvefgigrlpgiynalevelvefgtlllgvalnlgedkVrvivmgstdGlsrGteVkrTG 69
                   i++++Gpvv +e++ig   ++y++++v+  +  + l+g++++++ dk+ ++v+++t G+ +G++V+rTG
     KHJ35307.1 20 IYSISGPVVVAENMIG--VAMYELVRVG--H--ENLVGEVIRIEADKATIQVYEETAGVTVGDPVIRTG 82
                   789*************..**********..8..89*********************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (609 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      579  (0.032294); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 4431.08
//
Query:       KHJ35308.1  [L=624]
Description: putative glutamyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.6e-101  338.6   0.0   3.9e-101  338.1   0.0    1.3  1  tRNA-synt_1c    tRNA synthetases class I (E and Q), catalytic
    1.3e-36  126.1   0.6    2.4e-36  125.2   0.3    1.6  2  tRNA-synt_1c_C  tRNA synthetases class I (E and Q), anti-codo
     0.0019   17.6   0.2      0.003   17.0   0.2    1.3  1  tRNA-synt_1e    tRNA synthetases class I (C) catalytic domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1c  tRNA synthetases class I (E and Q), catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  338.1   0.0  6.5e-105  3.9e-101       2     313 ..     122     426 ..     121     427 .. 0.98

  Alignments for each domain:
  == domain 1  score: 338.1 bits;  conditional E-value: 6.5e-105
                   -EEEE---SSSS-BHHHHHHHHHHHHHHHH.TT-EEEEEE--SSCCC--HHHHHHHHHHHHHTT---SSEEEEGGGGHHHHHHHHHHHHHTTSEEEE CS
  tRNA-synt_1c   2 VrtRfaPePtGyLHiGhakaallnylfAkn.nnGkfilRieDTdperekeeaeesiledlkwlgikwdekptyqsdrfdelkkyaeeLikkGkAYvc 97 
                   V+tRf+PeP+GyLHiGh kaa+ln +fA++ ++Gk++lR++DT+p++ek+e++++i+edl+++gik+ ++   +sd+++el++y+ +Lik+G+AY +
    KHJ35308.1 122 VVTRFPPEPSGYLHIGHLKAAMLNDYFAHEmYDGKLLLRFDDTNPSKEKQEYQDAIIEDLALVGIKP-DRTSFTSDYLQELYEYCIRLIKEGHAYAD 217
                   89**********************99998648***********************************.66999************************ PP

                   -STHHHHHHHHCCSSHSS-TTTTS-HHHHHHHHHHHHHTTHSTTTS-EEEESSBTTSS.GGGSSTEEEEEEESGGGSBTTTBTSTSEEE-HHHHHHH CS
  tRNA-synt_1c  98 ectkeeleeereeqeklgskerdrydeenlklfeeemkkgkaegekavvRlkideess.vefrDlvrgriklepqeihdlvivksdiyPtYdfavvi 193
                   ++ +e ++++r++   + sk+r++++e nl+lf +emk  ++ g k+++R+k+   ++  ++rD+v+ r++l p   h+++++ ++ yPtYdfa++i
    KHJ35308.1 218 DTDQETMRDQRMK--GIPSKNRENSVEINLALF-QEMKVASEIGLKNCIRAKMSVDNPnKAMRDPVIFRCNLLP---HHRTGDSWKMYPTYDFACPI 308
                   ***********99..99999*************.79*******************9999***************...******************** PP

                   HHHHTT-SEEEEEGGGGCCHHHHHHHHHHTT-S.-EEEEEE--EEETTSB-SHHHHHHHHHTTSSSSTT-TTSCBHHHHHHCTB-HHHHHHHHHHHC CS
  tRNA-synt_1c 194 dDaleeithvlrteefldntpkyiwllealglevppfiheylrlnlekkklSKRklsllvdekqvkewddlreallnflrrlGwtpekerelftree 290
                   +D+le++th+lrt+e+ d++p+y w+l+ l+l+ +++++ ++r+n+ +++lSKRkl+ lvd+  v +wdd+r+++++++rr G+t+ + r+++ +++
    KHJ35308.1 309 VDSLEGVTHALRTTEYTDRNPQYQWFLDTLKLR-HVYVWDFARMNFIRTVLSKRKLTKLVDSGVVWGWDDPRMPTIRGVRRHGMTIPALRDFILKQG 404
                   *********************************.*************************************************************** PP

                   CCSSS.EEEEHHHHHHHHHHHHH CS
  tRNA-synt_1c 291 liksfdlnresksleafdrkkLe 313
                    +++  + + + +++a ++k+++
    KHJ35308.1 405 PSRNI-VVMDWTNFWATNKKEID 426
                   *****.**************986 PP

>> tRNA-synt_1c_C  tRNA synthetases class I (E and Q), anti-codon binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0       1.1   6.3e+03      55      77 ..     248     270 ..     222     292 .. 0.68
   2 !  125.2   0.3   4.1e-40   2.4e-36       1     174 []     429     604 ..     429     604 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.1
  tRNA-synt_1c_C  55 akrlkpgeevrLkelynikveev 77 
                     ++++k  +e+ Lk+++ +k++  
      KHJ35308.1 248 FQEMKVASEIGLKNCIRAKMSVD 270
                     67778888888888887777433 PP

  == domain 2  score: 125.2 bits;  conditional E-value: 4.1e-40
  tRNA-synt_1c_C   1 ApRymaVl..dpvkvtienlpegkeeelevplhpknpelgtrkvpfskeiyiereDakrlkpgeevrLkelynikveevekdesgevtelkleyd 93 
                     A+R++aV+  + v+ +i+n p +k    + p+ pknp+lgt++v fs++++++++D+  ++ +ee++L+ ++n++v+++  + ++ +t ++le++
      KHJ35308.1 429 ASRHTAVEsrNSVRAKITNGP-DKIYFEDKPKVPKNPSLGTKSVAFSSNLILDQADVSLMEANEEITLMAWGNAFVRKI--NGTNPITDIELELH 520
                     89******99*********99.5777889**************************************************..45667887555555 PP

  tRNA-synt_1c_C  94 ..gesleearkkkgiihWvsaeeavea.evrlYdrLfkeee.de....dfllnpdslkvleeglaepalanlkkgdivQfeRiGyfrvd 174
                       g ++   r++k++++W+++e+++ a e  ++d+Lf++++ +e    ++++n ds k  +e l++ + ++lk++di+Q+eR+Gy+rvd
      KHJ35308.1 521 leG-DF---RRTKKKVTWLATEQNLIAaETWEFDHLFSKDKlEEddnwEDFVNRDSAKS-TEQLCDLNTKDLKVNDIIQLERKGYYRVD 604
                     104.55...78899*******8886666********995555544445888******97.8***************************8 PP

>> tRNA-synt_1e  tRNA synthetases class I (C) catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.2     5e-07     0.003      71     141 ..     100     234 ..      46     257 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 5e-07
                   -.................................................................HHHHHHHHHHHHHHHHHHTT----SB--BGG CS
  tRNA-synt_1e  71 s.................................................................vkelaekfieefkkdleaLnvlkptleprvs 102
                   +                                                                  ++  +++ ++  +dl+ +++++ + ++  s
    KHJ35308.1 100 KraaaskaggnynmalqdtekgvvtrfppepsgylhighlkaamlndyfahemydgklllrfddtnPSKEKQEYQDAIIEDLALVGIKP-DRTSFTS 195
                   44555555555555555555555555555555555555555555555555555555555555554444455677888999999888876.888999* PP

                   GGHHHHHHHHHHHHHTTSEEE-TTS-EEE-GGG-TTTTT CS
  tRNA-synt_1e 103 ekvdeiielvekliekgyaYavsdgdvyfdvskkeeYgk 141
                   ++++e+ e+  +li++g+aYa + +++++  ++++   +
    KHJ35308.1 196 DYLQELYEYCIRLIKEGHAYADDTDQETMRDQRMKGIPS 234
                   *********************999888877766665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (624 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       569  (0.0317363); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.24s 00:00:00.81 Elapsed: 00:00:00.41
# Mc/sec: 4553.48
//
Query:       KHJ35309.1  [L=1225]
Description: putative variant sh3 domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.4e-12   47.3   0.4    6.4e-12   45.9   0.1    1.8  2  Transglut_core  Transglutaminase-like superfamily
    2.9e-09   36.5   0.1    7.2e-09   35.2   0.1    1.7  1  SH3_2           Variant SH3 domain
    1.3e-05   24.7   0.1    1.3e-05   24.7   0.1    2.8  3  SH3_1           SH3 domain
     0.0027   17.5   0.0     0.0055   16.5   0.0    1.6  1  SH3_9           Variant SH3 domain


Domain annotation for each model (and alignments):
>> Transglut_core  Transglutaminase-like superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.1   1.4e-15   6.4e-12      12     111 ..     776     873 ..     769     874 .. 0.92
   2 ?   -3.9   0.0         4   1.8e+04      15      52 ..    1000    1039 ..     995    1040 .. 0.65

  Alignments for each domain:
  == domain 1  score: 45.9 bits;  conditional E-value: 1.4e-15
  Transglut_core  12 kdplekakaiyewvrknveysaprrtpgsrdaeavletgkGncedfaslfvallRalGipaRvvtgylsgeeekeq.svasedaHawvevylegy 105
                      ++ ++++ai +w++++++++  +   ++ d + v+++++G ++++a+l   ++ a+Gi++ vv+gyl+ + e  + ++ ++ +H+w+ v + ++
      KHJ35309.1 776 RSDVQRLRAIFTWISEKIAWE--EDFESEIDSRRVIQNRRGCAQEVATLVMEMCAAVGIHTEVVHGYLKLPGEVPElNFVPRANHWWNAVLI-DR 867
                     567899***************..89999999**************************************986655589**************.** PP

  Transglut_core 106 gWvplD 111
                      W  +D
      KHJ35309.1 868 EWRIMD 873
                     **9888 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 4
  Transglut_core   15 lekakaiyewvrknveys..aprrtpgsrdaeavletgkG 52  
                      +++a a +ewv +  +y+  a  ++++++ a +++  ++G
      KHJ35309.1 1000 KKRALAQAEWVGGVKRYTvkALLPGDEGYGALKIYAGKRG 1039
                      5788899999995555553255666666667777666666 PP

>> SH3_2  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.2   0.1   1.6e-12   7.2e-09       1      56 [.      14      69 ..      14      70 .. 0.93

  Alignments for each domain:
  == domain 1  score: 35.2 bits;  conditional E-value: 1.6e-12
                EEEESS-B-SCGCCB--B-TTEEEEEE..EEEECTTEEEEEE...CCCEEEEEGCGEEE CS
       SH3_2  1 yvraiedyvgedkseLsfkkGdvikvlslgskdsdgwwegev...gGrvGlfPsslvee 56
                +vra ++y ge+k  L f +Gd+i +l   + +++ ww g+    ++++GlfPs++ e+
  KHJ35309.1 14 WVRAKFSYGGESKHDLGFIEGDLIECL---NAGDGSWWMGRLwrdKRVKGLFPSNFIEV 69
                69*************************...8999999*****9766888******9987 PP

>> SH3_1  SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.7   0.1   2.8e-09   1.3e-05       1      48 []      16      64 ..      16      64 .. 0.95
   2 ?   -2.7   0.1       1.1   4.8e+03      28      39 ..     675     686 ..     665     688 .. 0.76
   3 ?   -1.1   0.6      0.33   1.5e+03      30      40 ..     857     867 ..     853     869 .. 0.80

  Alignments for each domain:
  == domain 1  score: 24.7 bits;  conditional E-value: 2.8e-09
                EESSSBEXSSTTBXEBSTTEEEEEEEECSSSEEEEEETTS.TEEEEEEG CS
       SH3_1  1 iAlYDYeaeesdELsfkkGDviivleksedgWwkgrlkgt.gkeGliPs 48
                +A++ Y +e++ +L f +GD i+ l+  ++ Ww grl ++ + +Gl+Ps
  KHJ35309.1 16 RAKFSYGGESKHDLGFIEGDLIECLNAGDGSWWMGRLWRDkRVKGLFPS 64
                699*********************************98887899****8 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 1.1
                 CSSSEEEEEETT CS
       SH3_1  28 sedgWwkgrlkg 39 
                  e++W+++r++ 
  KHJ35309.1 675 IETDWVQVRRDV 686
                 5789****9986 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 0.33
                 SSEEEEEETTS CS
       SH3_1  30 dgWwkgrlkgt 40 
                 ++Ww + l+++
  KHJ35309.1 857 NHWWNAVLIDR 867
                 59****99874 PP

>> SH3_9  Variant SH3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.0   1.2e-06    0.0055       1      49 []      17      68 ..      17      68 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.2e-06
       SH3_9  1 AlypyepreddeLsLqrGDvitvieesedgWlegsl...tGrtGlvPanyve 49
                A++ y   ++  L + +GD i  ++  ++ W+ g+l   +  +Gl+P+n++e
  KHJ35309.1 17 AKFSYGGESKHDLGFIEGDLIECLNAGDGSWWMGRLwrdKRVKGLFPSNFIE 68
                6788888888899999********999********554788*********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1225 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       652  (0.0363657); expected 358.6 (0.02)
Passed bias filter:                      387  (0.0215851); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.77u 0.26s 00:00:01.03 Elapsed: 00:00:00.42
# Mc/sec: 8742.71
//
Query:       KHJ35310.1  [L=697]
Description: putative dynamin-like gtpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   3.2e-100  335.0   0.0   6.1e-100  334.1   0.0    1.5  1  Dynamin_M  Dynamin central region
      1e-56  191.6   0.0    1.9e-56  190.7   0.0    1.5  1  Dynamin_N  Dynamin family
    2.5e-30  104.5   4.5    5.7e-30  103.3   4.5    1.7  1  GED        Dynamin GTPase effector domain
    2.7e-05   24.2   0.3    0.00021   21.3   0.3    2.3  1  MMR_HSR1   50S ribosome-binding GTPase
  ------ inclusion threshold ------
      0.023   14.4   0.2        2.1    8.0   0.0    2.4  2  AAA_15     AAA ATPase domain
      0.055   13.9   0.0       0.18   12.2   0.0    1.9  2  AAA_16     AAA ATPase domain


Domain annotation for each model (and alignments):
>> Dynamin_M  Dynamin central region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  334.1   0.0  2.1e-103  6.1e-100       1     284 [.     243     527 ..     243     528 .. 0.98

  Alignments for each domain:
  == domain 1  score: 334.1 bits;  conditional E-value: 2.1e-103
   Dynamin_M   1 vvdilenkvipLklGYvgVvnRsqkdInkkksieealkkEkaFFeshpayrkladkaGtpyLakkLnqiLvehIrkslPelkkkineklqklekeleel 99 
                 vvdil++++ipL+lGYv VvnR+q+dI+++ksi++al++E+++Fe+h+ayr+ ++++GtpyLa+kLn iL+ hI+++lP++k++i+ +lqk+++el+ l
  KHJ35310.1 243 VVDILAGRIIPLRLGYVPVVNRGQRDIENRKSITAALENERNYFENHKAYRNKSSYCGTPYLARKLNLILMMHIKQTLPDIKARISASLQKYTAELAGL 341
                 79************************************************************************************************* PP

   Dynamin_M 100 geskpsdeektklllqlitkfkedfkklieGe.sevstkelsggarireiFnetlekslekidpleelsdeeirtairnsrGrelplfvpekaFealvk 197
                 g+s+    +  +++l++it+f+++ +++++G+ +e+s+ elsggari+ +F+e +++ ++ +dp+++++d +irt+++ns+G++++lfv ++aFe +vk
  KHJ35310.1 342 GDSMLG--NSANIVLNIITEFCNEWRTVLDGNnTELSSVELSGGARISFVFHELYANGIKAVDPFDQVKDIDIRTILYNSSGSSPALFVGTTAFELIVK 438
                 *98765..9***********************44488************************************************************** PP

   Dynamin_M 198 kqikkleepalkcvelVyeelekivek.lek.elkrFpnLreeikevvedllreqeeptkemienliemelayintnhpdfigalkair 284
                 +qik+le+p+lkcv lVy+e+ +i+++ l+k  ++r+p L+e++  vv +++++  +pt++++++l++me +yint hpdf+++++a++
  KHJ35310.1 439 QQIKRLEDPSLKCVSLVYDEMVRILTQlLNKqLFRRYPGLKEKFHMVVISFFKKVIDPTNKLVKDLVAMESCYINTGHPDFLNGHRAMA 527
                 ***************************877799****************************************************9985 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.7   0.0   6.5e-60   1.9e-56       1     168 []      39     234 ..      39     234 .. 0.94

  Alignments for each domain:
  == domain 1  score: 190.7 bits;  conditional E-value: 6.5e-60
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS---S-EEEEECCT---C..............CS...SSEEEE....T-EB--CHHHHHHHHHHHHHHHT CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnptTrrplelqlgeeeeas..............eravkeelkek....ekkledfsevreeieketekiag 81 
                 i+vvGsqSsGKSSvl++++g+d+lprg++++Trrpl+lql + + +s              ++a+++e++e+    +kk++df+++r+ei kete ++g
  KHJ35310.1  39 IVVVGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLINRQPISktngllediasegdKEANIDEWGEFlhipAKKFHDFNKIRDEIVKETEAKTG 137
                 89**************************************55555555555666666666678999********************************* PP

                 SSSS--SS-EEEEEEETTS-SEEEEE---B-SSSGTTS.........HHHHHHH.STTEEEEEEEETTS-CCC-CHHHHHHHHSTTBTTEEEEEE-C CS
   Dynamin_N  82 ankgiskkvillkilsllvkgltlvDlPGldsvnkrdq.........elvkeyi.kkadiilavtsanhdlsnsealflarevdpkgkrtivvltkl 168
                 +n gis  +i+l+i+s++v +ltlvDlPGl++v+++dq         e+v ++i k+++iilavt an+dl+ns+ l+larevdp+g+rti+vltk+
  KHJ35310.1 138 RNAGISPAPINLRIYSPNVLTLTLVDLPGLTKVPVGDQprdierqirEMVLKQIsKPNAIILAVTGANTDLANSDGLKLAREVDPEGQRTIGVLTKV 234
                 ***********************************************************************************************96 PP

>> GED  Dynamin GTPase effector domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.3   4.5   1.9e-33   5.7e-30       2      92 .]     606     696 ..     605     696 .. 0.98

  Alignments for each domain:
  == domain 1  score: 103.3 bits;  conditional E-value: 1.9e-33
                 XXXXTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCCCCHHHCCTTSGGGHHHHT---SCHCCCCHHHHHHHHHHHHHCCCCCHH CS
         GED   2 eeseveeirslvksYfnivrktiadqiPkaimhllvneakeslqkellakLykkedldeLLkEdeeiaekRkelkkrlealkkAreilsev 92 
                 e +eve+i+ l++sY+niv++t+ d++Pkaim+ lv+ +k+++q+ell+++y++++ld+LLkE+++++++Rke+++++e+l++A+ei+s+v
  KHJ35310.1 606 EGIEVEVIKLLINSYYNIVKRTMIDMVPKAIMLNLVQFTKDEMQRELLENMYRTDTLDDLLKESDYTVRRRKECQQMVESLSRASEIVSQV 696
                 6689************************************************************************************986 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.3   0.3   7.1e-08   0.00021       1      84 [.      38     202 ..      38     233 .. 0.72

  Alignments for each domain:
  == domain 1  score: 21.3 bits;  conditional E-value: 7.1e-08
                 EEEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEE.................................................... CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgke.................................................... 47 
                 ++++vG   +GKS+++  ++g+      +  +Tr +   ++  ++++                                                    
  KHJ35310.1  38 QIVVVGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLI-NRQPisktngllediasegdkeanidewgeflhipakkfhdfnkirdeivketeak 135
                 589******************877777777777777666664.222245566788888899999999******************************** PP

                 .......................EEEEECGGCSS......HHHHHHHHHHHHHHHHC.TSEEEEEEE CS
    MMR_HSR1  48 .......................ielvDtpGlie......gaseekglgkaflalee.adlillvvd 84 
                                        ++lvD+pGl +        + e+++++ +l+ ++  ++i+l v 
  KHJ35310.1 136 tgrnagispapinlriyspnvltLTLVDLPGLTKvpvgdqPRDIERQIREMVLKQISkPNAIILAVT 202
                 *******************************853333222222223444444443332455444443 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0    0.0007       2.1      26      43 ..      39      56 ..      30      60 .. 0.85
   2 ?    3.8   0.1     0.013        38     204     317 ..     290     438 ..     265     452 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.0007
      AAA_15 26 tvliGkNnsGKSsileal 43
                 v++G ++sGKSs+le +
  KHJ35310.1 39 IVVVGSQSSGKSSVLENI 56
                799************966 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.013
      AAA_15 204 Rnvsdedsekkssllgklkekileealqekleeelteklkeiqeklkeidkklaeelk...........kilkkkidkikkfnykgkkneeieik.... 287
                 + + ++ s    ++l ++++ il+          +++ l++i+  ++   +k+++el+           +i+ ++i +++++   + + +++e++    
  KHJ35310.1 290 KAYRNKSSYCGTPYLARKLNLILM--------MHIKQTLPDIKARISASLQKYTAELAglgdsmlgnsaNIVLNIITEFCNEWRTVLDGNNTELSsvel 380
                 444444444444444444444444........3478889999999999999999999999999999999999999999999999999999999999999 PP

      AAA_15 288 ............................ddeelplnknGsGvqrllllillileaekk 317
                                             d +  ++ +n+sG + +l++ +  +e++ k
  KHJ35310.1 381 sggarisfvfhelyangikavdpfdqvkDIDIRTILYNSSGSSPALFVGTTAFELIVK 438
                 9999999999999999999999999997777778999999999999999999999888 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   5.9e-05      0.18       9     106 ..      18     116 ..      13     205 .. 0.71
   2 ?   -2.8   0.0       2.4   7.1e+03      54     106 ..     285     332 ..     274     391 .. 0.47

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 5.9e-05
      AAA_16   9 leqLlsalervrsgrp...elvllsGesGvGKsslvrell.ralekdg.giflrgkcdqlesaipysalaqalareellrqllde.aesaeleawrekl 101
                 +++L++++ +v  + p   + ++++G + +GKss+++ +  r +  +g gi++r   +     i ++++ ++    +ll+++++e +++a+ ++w e+l
  KHJ35310.1  18 VNKLQDVFTTVGVQNPidlPQIVVVGSQSSGKSSVLENIVgRDFLPRGtGIVTRRPLVLQ--LINRQPISKTN---GLLEDIASEgDKEANIDEWGEFL 111
                 568888999888888899999***************766547888887566655555554..23334455544...77777777776667888888887 PP

      AAA_16 102 eeala 106
                 +  ++
  KHJ35310.1 112 HIPAK 116
                 77666 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.4
      AAA_16  54 iflrgkcdqlesa...ipysalaqalareellrqlldeaesaeleawrekleeala 106
                 +f + k+ +++s+   +py  la+ l +  l+  +++      l++ ++++ ++l+
  KHJ35310.1 285 YFENHKAYRNKSSycgTPY--LARKL-NLILMMHIKQT-----LPDIKARISASLQ 332
                 5555555555444444555..33333.21222222222.....2222222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (697 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       534  (0.0297841); expected 358.6 (0.02)
Passed bias filter:                      431  (0.0240393); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.45
# Mc/sec: 4648.37
//
Query:       KHJ35311.1  [L=328]
Description: putative ribokinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-51  175.1   0.1    2.6e-51  174.7   0.1    1.0  1  PfkB      pfkB family carbohydrate kinase
  ------ inclusion threshold ------
      0.062   13.5   0.1       0.11   12.6   0.1    1.3  1  Nod1      Gef2-related medial cortical node protein Nod1


Domain annotation for each model (and alignments):
>> PfkB  pfkB family carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.7   0.1   2.9e-55   2.6e-51       4     300 ..       6     322 ..       4     324 .. 0.90

  Alignments for each domain:
  == domain 1  score: 174.7 bits;  conditional E-value: 2.9e-55
                 EEEEEEEEEEEEEECSSH..TTSEEEESEEEEEEESHHHHHHHHHHHTT...............-EEEEEEEEESSHHHHHHHHHHHHTTEEETTEEEE CS
        PfkB   4 vvviGealidliavsekl..egelvevktveksaGGagaNvAvalarlg...............advafigavGdDnfGeflleelkkegvdtdyvkid 85 
                 + +iG+++ dl+  + +l   ge+ ++ ++  + GG+gaN+Ava arl                ++v figavG D+fG +++++l  +g+dt++++++
  KHJ35311.1   6 ITIIGSLNTDLVTITGRLpsGGETLTATSFFTGLGGKGANQAVACARLSqlspsaatqsnvtkyINVKFIGAVGADEFGPRIISSLTTDGIDTSRIEVK 104
                 568****************889999************************************************************************** PP

                 SSSEEEEEEEEETTT.SEEEEEEEEGGGGGHHHHHHHHHHHHHGCTSEEEEES......EECTTSHHHHHHHHHHHHHHTTEEEEEECESSSHH..HHH CS
        PfkB  86 edtrtglalivvded.gertivfnrgaaadltkeeleededlleeadllyisg......llsselpeavleelaeaaknggtfdpnlldplgaq..fke 175
                 e++ tg+a+i+v+e  ge+ i+ n+ga++ l  +++       e  ++  +++      +l+ e+p +++ ++  +ak++   + ++l+p++a     e
  KHJ35311.1 105 EGKTTGVAVIIVEEFsGENRILLNPGANHSLVVDQF-------E--QISSLGTplpniiILQLEIPLSTVLQILRIAKKAE--VEVILNPAPAVvlPTE 192
                 *************99******************865.......2..2223333445556899*******************..*********8444444 PP

                 HHHHHHCTESEEEEEHHHHHHHHTSCT....HSHHHHHHHHHHHHHTTSSEEEEEEGGGEEEEEE....TTEEEEEEE.SSSS-SBGTTHHHHHHHHHH CS
        PfkB 176 allellaladllkpneeElealtgekl....edieealaalhklkakgaktvvvtlGkeGalvve....kdgelkvpavpkvkvvDttGAGDsfvggfl 266
                 a+++       l++ne+E+ +l+g+       +  + + ++++++ kg+++v vtlG++Gal+++    k ++++ pa++ ++vvDtt+AGD+fvg+++
  KHJ35311.1 193 AYHD----LPHLILNESEACILSGRRVsdisREGFDWKIVIKEFLDKGVRNVTVTLGANGALFASnlsdKFTVHHLPAFKVENVVDTTAAGDTFVGSYA 287
                 4444....44899*************97666444567778899999*********************977777888888999***************** PP

                 HHHHT.THHHHHHHHHHHHHHHHHHTSSSSSTCSC CS
        PfkB 267 aalle.gksleealrfanavAalvvqkkgaiaslp 300
                  ++++ +k ++e +r+a+ +Aa ++qk+ga+ s+p
  KHJ35311.1 288 LGIAKgEKCMKEVIRYACLAAARTIQKRGAQVSIP 322
                 *****66779*********************9988 PP

>> Nod1  Gef2-related medial cortical node protein Nod1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   1.3e-05      0.11      62     133 ..     131     201 ..     109     203 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 1.3e-05
        Nod1  62 nskslkekavqqvkslleeLpesklklLevvfsivselllkLplkdqcetvlasiaavvaPrkfvneayelv 133
                  ++sl +++ +q+ sl   Lp++ +  Le+ +s+v ++l ++ +k + e +l+   avv+P +  +++ +l+
  KHJ35311.1 131 ANHSLVVDQFEQISSLGTPLPNIIILQLEIPLSTVLQIL-RIAKKAEVEVILNPAPAVVLPTEAYHDLPHLI 201
                 5667888999*************************9997.6676*******************999988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (328 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       421  (0.0234815); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.22s 00:00:00.66 Elapsed: 00:00:00.37
# Mc/sec: 2640.58
//
Query:       KHJ35312.1  [L=285]
Description: hypothetical protein EV44_g5088 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (285 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       336  (0.0187406); expected 358.6 (0.02)
Passed bias filter:                      311  (0.0173462); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 2100.02
//
Query:       KHJ35313.1  [L=184]
Description: putative 60s ribosomal protein l18 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.6e-93  309.3   3.5    7.4e-93  309.2   3.5    1.0  1  Ribosomal_L18   Ribosomal protein 60S L18 and 50S L18e
     0.0037   17.9   0.1      0.011   16.5   0.1    1.9  1  Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27


Domain annotation for each model (and alignments):
>> Ribosomal_L18  Ribosomal protein 60S L18 and 50S L18e
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  309.2   3.5   8.2e-97   7.4e-93       1     187 []       2     184 .]       2     184 .] 0.98

  Alignments for each domain:
  == domain 1  score: 309.2 bits;  conditional E-value: 8.2e-97
  Ribosomal_L18   1 gidlkekkkkkskrkapksenvylklLvklyrfLarRtdskFnkvvlkrLfmsrinrpplslsrlvkkvkkkeeekkiavvvgtvtdDvrllevPk 96 
                    gidl++++ ++++rkapksenvy+klLvklyrfLarRtds Fnkvvl+rLfmsrinrpp+s+sr+v++++++ +++k++v++gtvtdD+rll+vPk
     KHJ35313.1   2 GIDLNAHHVRSTHRKAPKSENVYIKLLVKLYRFLARRTDSAFNKVVLRRLFMSRINRPPVSISRIVANISEE-SKNKMVVIIGTVTDDARLLQVPK 96 
                    89**99988*************************************************************87.79********************* PP

  Ribosomal_L18  97 lsvaALrftetararilkaGGeiltlDqLalraPtGkntvLlrGkkkareavkhfgaapgvphshkkpyvrskgrkfekargrrksrgfkv 187
                    lsvaALrft+tararil+aGGe ltlDqLalr+PtG+nt+L+rG+k++reavkhfg+   +ph++kkpyv+skgrkfekargrr+srgfkv
     KHJ35313.1  97 LSVAALRFTSTARARILAAGGETLTLDQLALRSPTGSNTLLIRGPKNSREAVKHFGF---GPHKNKKPYVASKGRKFEKARGRRRSRGFKV 184
                    ********************************************************9...*****************************96 PP

>> Ribosomal_L27A  Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   1.2e-06     0.011      72     126 ..      58     119 ..       8     121 .. 0.67

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 1.2e-06
                     --EEEGGGTTTTSSS....SE.EEE--S.....---..--EEEESEE-HHHHHHHHHTT-EE CS
  Ribosomal_L27A  72 aeeidleelaeaglikkkdgv.Kvlgkg.....eltk.klkvkaskfSkkAkekIeaaGGkv 126
                     ++++++++++++   ++k+++  ++g+       l+  kl+v a +f+++A+++I aaGG+ 
      KHJ35313.1  58 RPPVSISRIVANISEESKNKMvVIIGTVtddarLLQVpKLSVAALRFTSTARARILAAGGET 119
                     455666666444444445554467776444453334436*********************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (184 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       418  (0.0233142); expected 358.6 (0.02)
Passed bias filter:                      353  (0.0196888); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1408.17
//
Query:       KHJ35314.1  [L=157]
Description: putative transcription factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-21   75.9   0.1    2.3e-21   75.1   0.1    1.5  1  PC4       Transcriptional Coactivator p15 (PC4)


Domain annotation for each model (and alignments):
>> PC4  Transcriptional Coactivator p15 (PC4)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.1   0.1   1.3e-25   2.3e-21       7      52 .]      51      96 ..      42      96 .. 0.95

  Alignments for each domain:
  == domain 1  score: 75.1 bits;  conditional E-value: 1.3e-25
                EEEEEEEETTEEEEEEEEEEECTTEEEEEEEEEEEEHHHHHHHHHH CS
         PC4  7 rrvtvrefkGktlvdIReyyekdgelkPgkKGIsLtleqweaLkka 52
                rrv+++e+kG +l++IRe+y+kdge +PgkKGIsL+l+q++a++ka
  KHJ35314.1 51 RRVEISEYKGAHLINIREFYQKDGEFLPGKKGISLNLDQYKAFIKA 96
                9******************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1290  (0.0719505); expected 358.6 (0.02)
Passed bias filter:                      521  (0.0290591); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1156.25
//
Query:       KHJ35315.1  [L=362]
Description: putative 21s rrna (uridine -2 -o)-methyltransferase mrm2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-54  184.7   0.0    2.3e-54  184.2   0.0    1.2  1  FtsJ             FtsJ-like methyltransferase
     0.0036   17.2   0.0      0.009   15.9   0.0    1.9  1  Methyltransf_23  Methyltransferase domain
  ------ inclusion threshold ------
      0.069   13.0   0.0       0.57   10.0   0.0    2.1  2  Methyltransf_31  Methyltransferase domain


Domain annotation for each model (and alignments):
>> FtsJ  FtsJ-like methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.2   0.0   3.8e-58   2.3e-54       2     176 ..      63     288 ..      62     289 .. 0.98

  Alignments for each domain:
  == domain 1  score: 184.2 bits;  conditional E-value: 3.8e-58
                 CCCHHHHHHHHHHHHT-S-TT-EEEECT-TTSHHHHHHCCT.T.-SEEEEEESSSSHHHTTEEEECS-CCCSSHHHHHCHCHHH............... CS
        FtsJ   2 rsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealse............... 85 
                 +sR+a+KLleid+k++lfk+g+tvvDlg+aPG+wsqv+++r++++g+v+++D+ p +p++g + iqgd+++   + +  ++ls+               
  KHJ35315.1  63 KSRAAFKLLEIDSKYNLFKKGQTVVDLGYAPGSWSQVAVERTKPHGRVLGIDIIPAQPPKGASAIQGDFLSAGIQAEAITFLSKpdrgrpkselifsdp 161
                 79****************************************999*******************************99999999*************** PP

                 ....................................SSEEEEEE--S-SS-CHHHHHHHHHCCCCHHHHCCHCCCCECCCEEEECCCHCCCHHHHHHHH CS
        FtsJ  86 ....................................rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkql 148
                                                     r vd+v+sD+  ++sg++ +d++ +++L+ aale+al++l+ gg+fv+k+++g+e+++l+k++
  KHJ35315.1 162 eseikmcslfpeldlnsqslgeetprsgkviqtkpcRVVDVVLSDMMQNTSGINLKDHTGSMELCNAALEFALSCLRIGGHFVCKFYQGDEDKELEKKI 260
                 *************************************************************************************************** PP

                 HCCEEEEEEEE-SS--CCG-EEEEEEEE CS
        FtsJ 149 kkfFekvsvvkPkssrsesseeflvcrg 176
                 ++ F +v+  kP +sr+es+e+++v+++
  KHJ35315.1 261 RQSFGRVNREKPDASRKESKEAYFVALR 288
                 *************************985 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.5e-06     0.009      20      62 ..      80     147 ..      52     344 .. 0.70

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.5e-06
  Methyltransf_23  20 lraggrvLdiGcGtGillevl..rengf.svtgvDlspeaveiae......................k 62 
                       ++g+ v+d+G++ G++++v+  r++++  v g+D+ p++ ++ +                       
       KHJ35315.1  80 FKKGQTVVDLGYAPGSWSQVAveRTKPHgRVLGIDIIPAQPPKGAsaiqgdflsagiqaeaitflskP 147
                      36788****************87777889*********999987755555555555555555544440 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.0   9.5e-05      0.57       2      38 ..      81     117 ..      80     119 .. 0.94
   2 ?    0.4   0.0     0.082   4.9e+02      85     123 ..     221     261 ..     190     288 .. 0.66

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 9.5e-05
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelaeelgpkaevvGiDise 38 
                      +kg +v+DlG + G  + ++ e+  p+++v GiDi +
       KHJ35315.1  81 KKGQTVVDLGYAPGSWSQVAVERTKPHGRVLGIDIIP 117
                      68999******************************87 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.082
  Methyltransf_31  85 naladpdkileeiervlkpggilliedpr..llaelpakve 123
                        +  ++++le + + l+ gg++++  ++    +el +k++
       KHJ35315.1 221 GSMELCNAALEFALSCLRIGGHFVCKFYQgdEDKELEKKIR 261
                      56777888888999999999999987666443333334444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2664.64
//
Query:       KHJ35316.1  [L=1045]
Description: putative px domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.7e-30  104.9   0.7    1.3e-29  103.4   0.7    1.9  1  PXA       PXA domain
    1.6e-19   70.5   0.0    1.6e-19   70.5   0.0    3.0  4  Nexin_C   Sorting nexin C terminal
    1.2e-06   28.4   1.5    4.3e-06   26.7   0.1    2.6  3  PX        PX domain


Domain annotation for each model (and alignments):
>> PXA  PXA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.4   0.7   2.2e-33   1.3e-29       2     180 ..     138     309 ..     137     311 .. 0.87

  Alignments for each domain:
  == domain 1  score: 103.4 bits;  conditional E-value: 2.2e-33
         PXA   2 peldeelhellalilrdfVlsWYski.ssdeeFptevrsilrsviralanrl.kk..vD.laqlll..trlldlltshlrdyrqaeekvkskkaeeesd 93 
                 pe++++l+el++ ++rd+V++WY+ki ++d++F+ ++r+ l  +i ++  +l kk   D ++++l+  ++++ ++  +l++       ++ +     + 
  KHJ35316.1 138 PETAAALRELVDAVIRDYVNWWYHKIlPKDTTFTAAIRQSLLRIIISIYLHLsKKrpEDiFLDFLTnsSSVMIVFLGELSSA------LTLSP---GPA 227
                 7899**********************899***********************544564533444447788888888888642......22222...367 PP

         PXA  94 ldlaakffalephpalsavlrdieeskeaelaylrslverlLslllppedlesetvrtlvreilanvvlkplleklsdPdfinqlii 180
                 +d+ + +  ++p++ l++ l     +++++++ l++ + ++++ +++++ l+++++r++++eil+++vl+ +l+++s+P++in++i+
  KHJ35316.1 228 TDAVHSYLFANPESSLANAL-----DEQNQKKKLKMTAADIIENFVEKSVLDCNPLRIFLTEILSCLVLESVLKTCSKPEWINGWIV 309
                 899999999*******9655.....6789*********************************************************8 PP

>> Nexin_C  Sorting nexin C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.2       2.8   1.7e+04      56      76 ..     363     383 ..     327     390 .. 0.59
   2 ?   -1.4   0.0      0.57   3.4e+03      31      62 ..     599     632 ..     581     650 .. 0.69
   3 ?   -2.9   0.2       1.7     1e+04      57      82 ..     860     885 ..     849     895 .. 0.74
   4 !   70.5   0.0   2.6e-23   1.6e-19       1     111 [.     909    1025 ..     909    1026 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 2.8
     Nexin_C  56 skaesaperseeeklrtraea 76 
                 s++ ++ +r++e+  +  +ea
  KHJ35316.1 363 SQKHNRLSRTDEDMDKALEEA 383
                 223333344444444444444 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.57
     Nexin_C  31 ekltseeavaslikklrdalW..Pdgeskaesap 62 
                 +++t+e   ++l + lrda+W  P  es+ +++ 
  KHJ35316.1 599 KDFTKETLRVELERYLRDACWyqPLAESEGMKRF 632
                 5678888888999999999995532233333333 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 1.7
     Nexin_C  57 kaesaperseeeklrtraearklLle 82 
                 ++  +++rs ++k r+ ++a k L e
  KHJ35316.1 860 HKRAKSSRSGSMKTRKSRKASKPLTE 885
                 45556678888888888888887765 PP

  == domain 4  score: 70.5 bits;  conditional E-value: 2.6e-23
     Nexin_C    1 W.lrrqaltvlkqvlqqllg...dtierwlkekiek.ltseeavaslikklrdalWPdgeskaesaperseeeklrtraearklLle.llpdalvsv 91  
                  W +rr++lt++k++++++ +    +i+++++e+i + + s+  +a +++k+r+++ P +++ ++ + ++s e k+r+r +ar+lL++ ++p al+ v
  KHJ35316.1  909 WnIRRTLLTAAKTYFLRPGNpslLQIQSLVQESIISaNISDTGIAAHLHKIRENCLPSEDELKKWSTKMSPENKERLRIKARSLLIKrGVPIALTGV 1005
                  99*******************999************************************************************************* PP

     Nexin_C   92 vGrknaeealkrifellQnp 111 
                  +G+++++ea+  if+ lQ +
  KHJ35316.1 1006 MGQAATSEAMGHIFDYLQIE 1025
                  ******************65 PP

>> PX  PX domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   0.0      0.35   2.1e+03      80     112 ..     172     204 ..     154     205 .. 0.69
   2 ?   -3.3   0.1       1.4   8.5e+03       7      30 ..     460     486 ..     443     491 .. 0.57
   3 !   26.7   0.1   7.1e-10   4.3e-06      16     112 ..     540     635 ..     521     636 .. 0.73

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.35
                 HHHHHHHHHHHHHHHHTSCHHHHSHHHHHHHHS CS
          PX  80 iekrrkgLeeyLqrllnhpelrnsevlteFLev 112
                 +++r++ L   +   l+ +  r+ +++ +FL++
  KHJ35316.1 172 AAIRQSLLRIIISIYLHLSKKRPEDIFLDFLTN 204
                 34555555555555666677777********87 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 1.4
                 EEEEEEEE...TTSSEEEEEEEEEETT CS
          PX   7 svlerets...gskkhsyylyevelkt 30 
                 s ++ e+s    ++++  +++++++++
  KHJ35316.1 460 SSTNHEKSgilSESQDPSTTINISHSN 486
                 344444445555555666666666665 PP

  == domain 3  score: 26.7 bits;  conditional E-value: 7.1e-10
                 TSSEEEEEEEEEETTS.SSEEEEEEEHHHHHHHHHHHHHHHTTSTSTSSSTSGSSSSSCTTSHHHHHHHHHHHHHHHHHHHTSCHHHHSHHHHHHHHS CS
          PX  16 skkhsyylyevelktg.akewtvkRrYsdFeeLhskLlrkfprvkiPplPkkvlfgsvrkkdeefiekrrkgLeeyLqrllnhpelrnsevlteFLev 112
                 sk +  +l+++e  ++ +  w + RrYsdFe Lh+ L+r  + ++  ++  +++     + ++   e+ r +Le+yL+  +  + l +se +++F++ 
  KHJ35316.1 540 SKPSFDFLIQIEPASSsHPGWMIVRRYSDFETLHEVLRRIAQ-ISGVTFFTEQHQTL-PNWKDFTKETLRVELERYLRDACWYQPLAESEGMKRFFKK 635
                 34444467777777668899*****************99999.44444444444433.3444444467789************************975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1045 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1391  (0.0775838); expected 358.6 (0.02)
Passed bias filter:                      563  (0.0314016); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.80u 0.29s 00:00:01.09 Elapsed: 00:00:00.43
# Mc/sec: 7215.30
//
Query:       KHJ35317.1  [L=581]
Description: putative smc domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (581 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1402  (0.0781973); expected 358.6 (0.02)
Passed bias filter:                      322  (0.0179597); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.56u 0.28s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3977.49
//
Query:       KHJ35318.1  [L=399]
Description: putative zinc finger cchc-type protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-05   23.4   1.9    5.7e-05   23.0   0.6    1.9  2  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0      0.35   6.2e+03       9      13 ..     207     211 ..     206     211 .. 0.79
   2 !   23.0   0.6   3.2e-09   5.7e-05       2      17 ..     283     298 ..     282     299 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.35
                 SSSTT CS
     zf-CCHC   9 pGHia 13 
                 +GHi+
  KHJ35318.1 207 EGHIK 211
                 8**95 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 3.2e-09
                 CTSSSSSSSSTTTTST CS
     zf-CCHC   2 kCynCGepGHiardCp 17 
                 +C++C++ GHia+ C+
  KHJ35318.1 283 QCFKCQRYGHIAKMCT 298
                 7**************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (399 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       731  (0.0407719); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2807.20
//
Query:       KHJ35319.1  [L=296]
Description: putative sur7 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.7e-25   89.9   6.4    1.9e-25   89.7   6.4    1.0  1  SUR7       SUR7/PalI family
  ------ inclusion threshold ------
      0.074   12.0   3.5        0.1   11.6   3.5    1.1  1  Gaa1       Gaa1-like, GPI transamidase component
       0.18   11.7   9.2       0.32   10.9   9.2    1.3  1  Fig1       Ca2+ regulator and membrane fusion protein Fig1
       0.39   10.2   8.7       0.45   10.0   6.4    2.0  2  BCLP       Beta-casein like protein
       0.83    8.3  12.6        1.2    7.7  12.6    1.1  1  Ndc1_Nup   Nucleoporin protein Ndc1-Nup
        1.5    8.7  10.6       0.11   12.3   5.4    1.8  2  Amastin    Amastin surface glycoprotein
        1.5    8.8  11.1       0.24   11.3   0.3    3.5  4  DUF4389    Domain of unknown function (DUF4389)
        6.7    5.4  16.0       0.68    8.6  10.6    2.1  2  DUF2207    Predicted membrane protein (DUF2207)


Domain annotation for each model (and alignments):
>> SUR7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.7   6.4   8.7e-29   1.9e-25       2     212 .]       5     276 ..       4     276 .. 0.94

  Alignments for each domain:
  == domain 1  score: 89.7 bits;  conditional E-value: 8.7e-29
        SUR7   2 rlillflslaalilllfailgsiknstpltsiylskfdlsgldlaqi.............................................gladvys 55 
                 ++++l +s++ l+l+++ i+++  +  +++++ ++++++s l    i                                             g++++y+
  KHJ35319.1   5 VIVPLACSVVGLVLSFLLIFAGN-RPGFMKDYQIVTLNTSTLGHD-IlpkiskanlipiltpeddllssmsgitdqlngifddiaddvvrslGIQQFYN 101
                 5899*****************99.9999************55555.3589************************************************* PP

        SUR7  56 fgvwgyC..........dnsdvnytkCskpkagypfdpl.eelnsesngkvd........lPsnlrktlsklnnltkalfilhiialvlsfislvvgll 135
                 +++ ++C          dn +  +t+Cs+p+a+y f+ + +++++e +            +P++l+k+ ++l ++ +a++ ++ ia+ +++ ++++gll
  KHJ35319.1 102 WHLRNFCegmykpsykaDNASFAVTDCSQPTASYHFK-IgDIIDRELRVGPLhiglqdlkWPDALQKNFDTLSKALHAALSFYAIAITATIFAIITGLL 199
                 *************************************.55999999985444999******************************************** PP

        SUR7 136 aicvspdnsrllsflnlllsvlsflatllaalldtllfvfvrkkin..lkefgikaslglkflafaWlalaaallvvif 212
                  ++   +ns lls+ ++ l  l f+++++++++++++  +  k ++   +++gi a  g k+la++W +++++ll+vi+
  KHJ35319.1 200 VLF--GSNSLLLSLTTWALLGLGFFSLFVSSIIIVIVNSKSIKIVQenGSKIGIYAYKGHKYLALTWCSAFVMLLAVIS 276
                 ***..888888999999****************999999888888899****************************995 PP

>> Gaa1  Gaa1-like, GPI transamidase component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   3.5   4.5e-05       0.1     302     402 ..     183     284 ..     153     286 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 4.5e-05
        Gaa1 302 lllvlllvlvlhllgllllllptkltqleenlkteealllalllltvlllllplllslllkrllka.keq...kvellksvsllllglllsalallNfS 396
                 +++ ++ +++++++gll+l+ +++l     +l+t  +l l++++l+v ++++ ++ s  +k ++++ ++     ++  k ++l++ + ++++la++ f+
  KHJ35319.1 183 YAIAITATIFAIITGLLVLFGSNSLLL---SLTTWALLGLGFFSLFVSSIIIVIVNSKSIKIVQENgSKIgiyAYKGHKYLALTWCSAFVMLLAVISFG 278
                 344566667777777777777777555...7999999*************9999999888755544344467799999********************* PP

        Gaa1 397 Lallva 402
                  a++ +
  KHJ35319.1 279 AAIFFG 284
                 999876 PP

>> Fig1  Ca2+ regulator and membrane fusion protein Fig1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   9.2   0.00014      0.32      68     181 ..     172     276 ..     163     283 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00014
        Fig1  68 lakkfsdnvvhpyllmvaiiLtlllfllllyfplgseipllPfkskavskvalvlsflllllwlvgalwqhvassaastlveeasmgi.vkskvGkkae 165
                 l+k++ +++ +  + ++a+i++++  ll+l+             s  +s  + +l  l ++ ++v+++   ++ s + ++v+e   +i + + +G k  
  KHJ35319.1 172 LSKALHAALSFYAIAITATIFAIITGLLVLF----------GSNSLLLSLTTWALLGLGFFSLFVSSIIIVIVNSKSIKIVQENGSKIgIYAYKGHKYL 260
                 4555555555555555555555555444433..........334443555555666677777777777766666667777777777777********** PP

        Fig1 166 algWfafaflllvclg 181
                 al+W++ +++ll ++ 
  KHJ35319.1 261 ALTWCSAFVMLLAVIS 276
                 ****998888886654 PP

>> BCLP  Beta-casein like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.37   8.4e+02      89     116 ..      10      37 ..       5      47 .. 0.75
   2 ?   10.0   6.4    0.0002      0.45      45     108 ..     184     247 ..     171     252 .. 0.86

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.37
        BCLP  89 aacavgLlvavvltiankgrallakCnf 116
                 a+++vgL++++ l +a ++  ++++ ++
  KHJ35319.1  10 ACSVVGLVLSFLLIFAGNRPGFMKDYQI 37 
                 4568999999999999888877776665 PP

  == domain 2  score: 10.0 bits;  conditional E-value: 0.0002
        BCLP  45 viavvsgllsiisGivaivlsrnlknkklqwallvlsllaallsaacavgLlvavvltiankgr 108
                  ia+++++ +ii+G++++  s  l  +  +wall l++ + ++s + +v +    ++ ++++g+
  KHJ35319.1 184 AIAITATIFAIITGLLVLFGSNSLLLSLTTWALLGLGFFSLFVSSIIIVIVNSKSIKIVQENGS 247
                 599****************************************999888776666666666665 PP

>> Ndc1_Nup  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.7  12.6   0.00054       1.2      11     100 ..     186     282 ..     176     287 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.7 bits;  conditional E-value: 0.00054
    Ndc1_Nup  11 allllllsyllslllsl.sssllwswfplgpaglralllflsllpilvlrkaqlhvgprt......tssrlstllaslfslqtletllvyllSallf 100
                 a +  + ++++ ll+++ s+sll s+  +  +gl ++ lf+s+++i++++ +++ + +        +  + +++la  +   ++ +l+v++++a +f
  KHJ35319.1 186 AITATIFAIITGLLVLFgSNSLLLSLTTWALLGLGFFSLFVSSIIIVIVNSKSIKIVQENgskigiYAYKGHKYLALTWCSAFVMLLAVISFGAAIF 282
                 667778889999999999****999999999***********************8887777777888888999*******************99876 PP

>> Amastin  Amastin surface glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.2       2.4   5.5e+03      73      88 ..       9      24 ..       4      29 .. 0.53
   2 ?   12.3   5.4   4.9e-05      0.11      57     151 ..     171     270 ..     159     281 .. 0.66

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 2.4
     Amastin 73 ilvlaaalllsvllll 88
                ++++++ l+ls+ll++
  KHJ35319.1  9 LACSVVGLVLSFLLIF 24
                4444555555555444 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 4.9e-05
     Amastin  57 rrrsrfraaqafsiisilvlaaalllsvllllccss..lkwvclllnivsvvtllivwalmvavyykrfCdalksttakyga....GFgLlvvawlldl 149
                  + + ++aa  f+ i+i +++ a+++++l+l++ +s  l +++ +l  ++++ l++++ ++v   +++  + ++++  k g     G   l + w+  +
  KHJ35319.1 171 TLSKALHAALSFYAIAITATIFAIITGLLVLFGSNSllLSLTTWALLGLGFFSLFVSSIIIVI-VNSKSIKIVQENGSKIGIyaykGHKYLALTWCSAF 268
                 567899**************************9744113444555555555555555544444.44444444444444555555555555555555555 PP

     Amastin 150 in 151
                 ++
  KHJ35319.1 269 VM 270
                 55 PP

>> DUF4389  Domain of unknown function (DUF4389)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1       0.8   1.8e+03      26      39 ..      12      25 ..       4      34 .. 0.53
   2 ?   -1.1   0.4       0.8   1.8e+03      28      40 ..     185     197 ..     176     212 .. 0.48
   3 ?   11.3   0.3   0.00011      0.24      12      66 ..     208     262 ..     205     264 .. 0.93
   4 ?    3.4   0.1     0.033        73      23      44 ..     267     288 ..     261     289 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 0.8
     DUF4389 26 wvvvvvqflivLvt 39
                 vv +v  + ++++
  KHJ35319.1 12 SVVGLVLSFLLIFA 25
                34444444444444 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.8
     DUF4389  28 vvvvqflivLvtg 40 
                 +++   +++++tg
  KHJ35319.1 185 IAITATIFAIITG 197
                 2222222222222 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 0.00011
     DUF4389  12 llfaivlslaslvlwvvvvvqflivLvtgrpnepLrdfgksllrYiarilrfltl 66 
                 ll +  ++l++l+++ + v  ++iv+v  ++ + + + g+++++Y ++ +++l l
  KHJ35319.1 208 LLSLTTWALLGLGFFSLFVSSIIIVIVNSKSIKIVQENGSKIGIYAYKGHKYLAL 262
                 67778899********************************************986 PP

  == domain 4  score: 3.4 bits;  conditional E-value: 0.033
     DUF4389  23 lvlwvvvvvqflivLvtgrpne 44 
                   +++++v+ f ++++ gr++e
  KHJ35319.1 267 AFVMLLAVISFGAAIFFGRRSE 288
                 45778999**********9987 PP

>> DUF2207  Predicted membrane protein (DUF2207)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.2       1.6   3.5e+03     215     228 ..      11      24 ..       4      39 .. 0.45
   2 ?    8.6  10.6    0.0003      0.68     365     444 ..     166     293 ..      52     295 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 1.6
     DUF2207 215 llilllllllllli 228
                   ++ l+l +ll++
  KHJ35319.1  11 CSVVGLVLSFLLIF 24 
                 22222222222222 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0003
     DUF2207 365 kkkergyfdkkgkkklkklsalglgliilglilillallllvll....................................................... 408
                 +k     fd+ +k+  + ls+++++++  ++++i+++l+l+++                                                        
  KHJ35319.1 166 QK----NFDTLSKALHAALSFYAIAITATIFAIITGLLVLFGSNslllslttwallglgffslfvssiiivivnsksikivqengskigiyaykghkyl 260
                 33....666666666666666666666666666666666665556688889999999999999999999999999999999999999999999999999 PP

     DUF2207 409 .lvfllilllillliaiivlllfsrllgrrteeGael 444
                  l++++ ++++l++i+++++++f    grr+e+G+ +
  KHJ35319.1 261 aLTWCSAFVMLLAVISFGAAIFF----GRRSEKGSTE 293
                 99999999999999998888886....7788888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (296 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       924  (0.0515366); expected 358.6 (0.02)
Passed bias filter:                      449  (0.0250432); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.53u 0.30s 00:00:00.83 Elapsed: 00:00:00.47
# Mc/sec: 1905.69
//
Query:       KHJ35320.1  [L=522]
Description: putative protein pns1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.7e-76  257.5  33.9    1.7e-76  257.5  33.9    2.3  2  Choline_transpo  Plasma-membrane choline transporter
  ------ inclusion threshold ------
       0.18   12.4   7.0       0.46   11.1   7.0    1.7  1  Pex14_N          Peroxisomal membrane anchor protein (Pex14p)
        0.8   10.4   9.6      0.052   14.2   3.7    2.2  2  DoxX_3           DoxX-like family


Domain annotation for each model (and alignments):
>> Choline_transpo  Plasma-membrane choline transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   7.3      0.11   6.4e+02      53     133 ..      79     169 ..      67     175 .. 0.48
   2 !  257.5  33.9   2.9e-80   1.7e-76       1     326 []     177     496 ..     177     496 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 0.11
  Choline_transpo  53 llvsafwivvavalylassgestdkv...nsgsesglaavefessskvkalllyllfgllWtle.......flralqqvtvagavasWYfs 133
                      +++++  ++++++l +++++  +++      +++++l+ +++ + + v ++++++ ++++W++        +++++ q++   a a +Yf+
       KHJ35320.1  79 FACTVAGFIAVSVLSISGNDIGSSRDktiYRTETVSLNTNTIILFAFVLCIAFVTSLSYFWVIRtftkqaiWITGILQIVFGLATAFYYFT 169
                      3333333333323322222222222123322333333333444445555555555557777764222223356777777777777777777 PP

  == domain 2  score: 257.5 bits;  conditional E-value: 2.9e-80
  Choline_transpo   1 iillivavllllllivlrkrirlaiallkvaskaiksnpslllvplltllllllvsafwivvavalylassgestdkvnsgsesglaavefess 94 
                      i+ l++++++++++i ++ ri++++ +l++ +++ ks+ +++ ++l+  + ++ ++a+++v++v +y   ++++ +k+++ ++     +++ s+
       KHJ35320.1 177 IAYLVFSIFYIICFISWIPRIPFSVLMLQTIIDVSKSYGHVFWISLIGGFTATTFAAWFSVTMVSIY--VKYYPGNKACTANG-----SSC-SQ 262
                      5789***********************************************************8887..34444332233333.....334.78 PP

  Choline_transpo  95 skvkalllyllfgllWtleflralqqvtvagavasWYfskkkdlp..skfpvlkslkraltyhlGSialgSlilaivqllrlileylekklkkk 186
                      +kv++ll++  f+ +W++e+++++++v ++g+++sWYf  +k++   +k ++++++kra+ty++GSi +gSl++aivq+lr++++++ ++  ++
       KHJ35320.1 263 GKVIGLLIFITFAGYWITEVIKNIIHVSISGVYGSWYFC-SKKPGgfPKGSTRGAFKRAMTYSFGSISFGSLLVAIVQVLRQACSIATQNEAAE 355
                      ***************************************.44445688888**********************************855555555 PP

  Choline_transpo 187 enavakcllcclkcclwclekflkflnrnayimvaiyGksFcesakdafellkrnglrvavldsvvdfvlflgkllialltgliaylllkatlt 280
                       n + +c++ccl+ ++++l++ ++fln +a+ ++a+yGks++++ak +++++ ++g++++v++++++ vl++g++++a+l++l+a+l+l+ t  
       KHJ35320.1 356 GNIFGMCFFCCLQYLIGILDWAIQFLNEYAFSYIALYGKSYIKAAKATWKMMIDRGVDAIVNECLINPVLTMGAVFVAYLSSLFAFLYLQFTRP 449
                      777888********************************************************************************99997665 PP

  Choline_transpo 281 npe.elnsplvpllvvfiiayliasiflsvyesavdtifvcfaeDpe 326
                      + +   ++++v+++++f+i+++ia++fl  ++s+v t+fv++a Dp+
       KHJ35320.1 450 SYNdGNAFTIVVMAFAFLIGLQIANVFLVPIKSGVATFFVAMAFDPQ 496
                      55578999999*********************************985 PP

>> Pex14_N  Peroxisomal membrane anchor protein (Pex14p) conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   7.0   7.7e-05      0.46      78     148 ..       4      94 ..       1      99 [. 0.69

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 7.7e-05
     Pex14_N  78 qpqaasqtsqsspspsppaqqqqqqy.rpPivtypefltkppkppppPlr.....................twrdllitatalaglgaglygl 148
                 +pq++++++q++p+  p++q+qqq + +pP +ty +++ +   +p++ +                       w ++ ++ t+++ +++++ ++
  KHJ35320.1   4 NPQQPYYQQQQAPPYGPQTQYQQQFHyQPPEQTYAHQVPN--YNPQVNYSapqdsldftqtfkveepkyhdLWATISFACTVAGFIAVSVLSI 94 
                 6777777777777766666666554459999999644433..222333336677999999999999988888888888888888888887765 PP

>> DoxX_3  DoxX-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   3.7   8.7e-06     0.052      31      79 ..     142     190 ..     119     204 .. 0.89
   2 ?   -3.4   0.3       2.6   1.5e+04      47      84 ..     461     498 ..     456     502 .. 0.61

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 8.7e-06
      DoxX_3  31 ealasllliaggladialGlllllrrkrrlalllqialllayllaatll 79 
                 +++ +++++++g+++i++Gl+++++  +r++l + ia l++ +++++ +
  KHJ35320.1 142 RTFTKQAIWITGILQIVFGLATAFYYFTRHWLSAGIAYLVFSIFYIICF 190
                 678899*******************************999988887755 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.6
      DoxX_3  47 alGlllllrrkrrlalllqialllayllaatlllpelw 84 
                 +++ ++l++ + + ++l+ i   +a  + a++++p+++
  KHJ35320.1 461 VMAFAFLIGLQIANVFLVPIKSGVATFFVAMAFDPQVL 498
                 45666666666666666666666666666666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (522 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1275  (0.0711138); expected 358.6 (0.02)
Passed bias filter:                      478  (0.0266607); expected 358.6 (0.02)
Passed Vit filter:                        52  (0.00290033); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.66u 0.34s 00:00:01.00 Elapsed: 00:00:00.46
# Mc/sec: 3381.37
//
Query:       KHJ35321.1  [L=160]
Description: hypothetical protein EV44_g0213 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        0.1   13.0   8.7       0.16   12.4   8.7    1.3  1  NUDE_C    NUDE protein, C-terminal conserved region
       0.51    8.8   9.4       0.51    8.8   9.4    1.0  1  Macoilin  Macoilin family
        3.9    6.4  15.6          5    6.1  15.6    1.2  1  FAM199X   Protein family FAM199X
        3.9    6.3   7.4        4.5    6.1   7.4    1.0  1  Miga      Mitoguardin


Domain annotation for each model (and alignments):
>> NUDE_C  NUDE protein, C-terminal conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   8.7   3.6e-05      0.16      44     127 ..      12      92 ..       9     124 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.6e-05
      NUDE_C  44 lsDLkveleiiqeklrkaeeklrrrkplslsspstpqsleiekrspavqasssPviatppekslsslatg.setatppsPpases 127
                 ls  +  ++i+q k+    + +  +k++s+  p  ++s + +   p + +sss+  at+++++lssl ++ +++++p+s ++   
  KHJ35321.1  12 LSAFRAHAAIQQAKVSTS-SSSTSKKKTSV--PHHSHS-TSSSSQPLSITSSSKAGATTTATALSSLHSSrAHSSSPLSCSLGTQ 92 
                 56778899999*997774.44566677777..333333.2334455566669999999999999999966777788888776554 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   9.4   0.00011      0.51     292     366 ..      20      97 ..       9     149 .. 0.69

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00011
    Macoilin 292 kskskrlsksessgsesellveesvkskssssssssnknskkasagsagssnssskkhsessksvtsss...ssknsk 366
                  ++++++s+s+ss+s++++ v ++++s+ssss++ s  +s+ka a++++++ ss ++ +++s+s+ s s   ++ n+k
  KHJ35321.1  20 AIQQAKVSTSSSSTSKKKTSVPHHSHSTSSSSQPLSITSSSKAGATTTATALSSLHSSRAHSSSPLSCSlgtQTMNEK 97 
                 567788888888889999888888888888888777766666666666666666666555566655555321444332 PP

>> FAM199X  Protein family FAM199X
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1  15.6    0.0011         5     184     257 ..      15      88 ..       6     107 .. 0.66

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.0011
     FAM199X 184 ikehsprqrasstreswkrssyssastsgvsaasssnasmvssassstasvgssaansaanisrahsdsnlssa 257
                  + h++ q+a+++  s   s+++++      ++sss+  +  ++ss ++++++++a s+   srahs s ls++
  KHJ35321.1  15 FRAHAAIQQAKVSTSSSSTSKKKTSVPHHSHSTSSSSQPLSITSSSKAGATTTATALSSLHSSRAHSSSPLSCS 88 
                 466777776666555554444444333333344444444444555556677777799*************9943 PP

>> Miga  Mitoguardin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   7.4     0.001       4.5      48     129 ..      21      99 ..      12     131 .. 0.54

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.001
        Miga  48 aeqeelakevlktasvkkrasekksrssssksndtlslasskassssaklsgslqslasvksvnsssssaaansaswdkeee 129
                 ++q ++ ++ ++t+  kk++s  + ++s+s+s + ls++ss ++  ++ + + l sl s ++ +ss  s    +++++++ +
  KHJ35321.1  21 IQQAKVSTSSSSTS--KKKTSVPHHSHSTSSSSQPLSITSSSKAG-ATTTATALSSLHSSRAHSSSPLSCSLGTQTMNEKYM 99 
                 45556655555554..44444444444444555555555543333.335555566666555555555544444555555444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (160 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1382  (0.0770818); expected 358.6 (0.02)
Passed bias filter:                      551  (0.0307323); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.48u 0.22s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 1215.02
//
Query:       KHJ35322.1  [L=391]
Description: putative tyrosyl-trna synthetase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.7e-59  200.1   0.0      6e-59  199.8   0.0    1.1  1  tRNA-synt_1b  tRNA synthetases class I (W and Y)


Domain annotation for each model (and alignments):
>> tRNA-synt_1b  tRNA synthetases class I (W and Y)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.8   0.0   3.3e-63     6e-59       3     292 ..      41     337 ..      39     338 .. 0.91

  Alignments for each domain:
  == domain 1  score: 199.8 bits;  conditional E-value: 3.3e-63
                   HS--EEEEEEETSSS-BGGGHHHHHHHHHHHHTTSEEEEEEEHHHHHTTTTT-SSHHHHHHHHHHHHHHHHHHH.HHTCHTTTEEEEETHHHHTTHH CS
  tRNA-synt_1b   3 erplrvysGidPTgklHlGylvplkklvelqkaghevffliaDlhAiigdpskaeerklrkreevlenaikaql.akgldpekaevvlqsewlehle 98 
                   +r+l+vy+G+++Tg++H+Gylv+++k++e++ ag+++ +l+aD hA++++++ a+++ +  r++++e++ika+l a+g++++++e+vl+s+++ ++ 
    KHJ35322.1  41 KRRLKVYWGTATTGRPHCGYLVAMMKIAEFLAAGCQIKILLADIHAYLDNMK-APMELVDYRAKYYEKVIKALLtAIGVNINQLEFVLGSSYQLSSA 136
                   689*************************************************.*********************8899******************* PP

                   HHHHHHHHHTTCBHHHHHHHHHCCHHCSSSC--BHHHHHHHHHHHHHHHHTCHSEEEEEGGGHHHHHHHHHHHHHHHHHSTTSS-EEEEET-BBSTT CS
  tRNA-synt_1b  99 laellrdlgklgslnrmlqfksvkkrleegegislgeftYplLqaaDilllkadlvpgGsDQkqnielgrdlarrfnkkevfkkpegltvplltgld 195
                   ++ + ++l  ++++n   ++ +  + ++++++ +lg ++Ypl+qa+D+++l++d ++gG DQ+++++++ + +++++++     + +l++p+++gl 
    KHJ35322.1 137 YTLDRFKLEGITRINVAQKAGA--EVVKQTDDPTLGGLIYPLMQALDEQYLDVDAQFGGIDQRKIFTFALENLPKIGYR----VRAHLMNPMVPGLG 227
                   *****************99999..6666655669********************************************9....************** PP

                   SSSBTTCETTCGC-BTTCCHHHHHHHHHHCHCSTTC..SHHHHHHHHHTHHH............CHHHHHHHHCCSEE..ESSHHHHHHHHHCCCCH CS
  tRNA-synt_1b 196 GekKmSKSagnsaIfLddekesvkkkiqkavtdsde..evekllklktelsn............elierleavsgkkp..kreaeellaeevtklvh 276
                      KmS S++ s+I+ +d ++ v+ ki+ka++ ++e  +++   ++ +++              +++er + +   +p  ++ + +l++++  + ++
    KHJ35322.1 228 EATKMSASDEDSKIDVLDTPDRVQRKIKKAKCVPREveGNGIIAFVEHVILRalalkssdhipqFTVERKDGL---EPlvYKNIDHLKKDYTADILT 321
                   ************************************8777777777777777888888866554444444432...234589999999999999999 PP

                   HHHHHHHHHHHHHHHH CS
  tRNA-synt_1b 277 ggdlkkalaealnell 292
                   ++ lk+a+ + ln++l
    KHJ35322.1 322 PQLLKDAVIRDLNAIL 337
                   9999999999999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (391 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       495  (0.0276089); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.39
# Mc/sec: 2975.49
//
Query:       KHJ35323.1  [L=489]
Description: putative hexokinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-81  273.8   0.0    1.4e-81  273.4   0.0    1.1  1  Hexokinase_2  Hexokinase
    2.2e-71  239.9   0.0      5e-71  238.7   0.0    1.6  2  Hexokinase_1  Hexokinase


Domain annotation for each model (and alignments):
>> Hexokinase_2  Hexokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  273.4   0.0   1.6e-85   1.4e-81       1     240 []     225     469 ..     225     469 .. 0.94

  Alignments for each domain:
  == domain 1  score: 273.4 bits;  conditional E-value: 1.6e-85
                   EEEEEESSSEEEEEEEEGGG-GGGTTTS.-TTSEEEEE--GGGTTTT-S.S-..--HHHHHHHHHSSSTTS-HHHHCCSHHHHHHHHHHHHHHHHC. CS
  Hexokinase_2   1 kiGlIlGtGtNacyleklsnieklegkk.eksgemviNtEwgafgdegk.lpllrtkyDkeldeespnpgeqlfEkmiSGmYLGelvrlvlldliee 95 
                   kiG+I+GtG+Na+y+e++ +i+kl++ + + ++ m+iN+Ewgaf++e+  lp  rt+yD+++d++sp+pg+q+fEkmi+G+YLGe++rlvl+dl+++
    KHJ35323.1 225 KIGCIFGTGCNAAYMEDCGSIPKLAHLNlPPETPMAINCEWGAFDNEHIcLP--RTPYDIIIDKDSPRPGQQAFEKMIAGLYLGEIFRLVLVDLHDN 319
                   69***********************9999***************99766555..******************************************9 PP

                   T..SSSC.....CCCSTTSS-THHHHHHHC--BTT-HHHHHHHHHCCS---.-HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH-.....SSEEEE CS
  Hexokinase_2  96 k..llfkgk.seklktpysldteflseieedesedleevrevleellglesvteedleivrevceavsrRaarlvAagiaallkklgkeekekvtvg 189
                   k   +f+g+  ekl+++++ld++fls+ieed+ e+l+e++ +++  l l++ t  +le++r+++e++++Raarl+A+g+aa+  k +    ++++vg
    KHJ35323.1 320 KdiHIFQGQnIEKLRKAFTLDSSFLSMIEEDPYENLSETQALFQGQLLLQT-TLPELELIRRLAELIGTRAARLSACGVAAIAIKKNY---KSCHVG 412
                   559999999555*********************************999988.******************************999766...79**** PP

                   EESHHHHHSTTHHHHHHHHHHHHHT--S.......-SEEEEE---TTTHHHHHHHHH CS
  Hexokinase_2 190 vdGslyekypkfrerlqealrellgeepe......kkvklklaedGsgvGAAliaav 240
                   +dGs+++kyp+f++r  +alre+l++ ++      +++++  aedGsgvGAAliaa+
    KHJ35323.1 413 ADGSVFNKYPHFKTRGAQALREILDWPAKksedeeDPIEILAAEDGSGVGAALIAAL 469
                   ***********************887777788888********************95 PP

>> Hexokinase_1  Hexokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  238.7   0.0   5.6e-75     5e-71       2     199 .]      27     219 ..      26     219 .. 0.97
   2 ?   -2.4   0.0      0.42   3.8e+03      65      85 ..     307     327 ..     302     349 .. 0.72

  Alignments for each domain:
  == domain 1  score: 238.7 bits;  conditional E-value: 5.6e-75
                   HHHHHHHH---HHHHHHHHHHHHHHHHHHHS.S.STS--EE----S---S--EEEEEEEEESSSEEEEEEEEEESSS.-EEEEEEEEE--GGGGGSB CS
  Hexokinase_1   2 leeilkqfelsdeklkelvdrfleemekgLakekeslkmlptyvtrlPtGkekGtylAlDlGgtnlRvllveLlges.kveitqekykipeelktgt 97 
                   ++++++ f++s+eklk+++++f++e+ekgL+ e+ s++m+pt+ +++PtG+e+G++lAlD+GgtnlR++ ++L++++ ++++ q+ky++peelk+g+
    KHJ35323.1  27 IRDLENLFTVSTEKLKAITSHFVKELEKGLSVEGGSIPMNPTWCMSFPTGHETGQFLALDMGGTNLRICEITLSQQKsEFDLIQSKYRMPEELKSGS 123
                   788999*************************99888*************************************96555******************* PP

                   HHHHHHHHHHHHHHHHHHH....ST..T-S-EEEEEEE-SSEE-SBTT--EE-S--TT---TT-TTSBHHHHHHHHHHHTT-SEEEEEEE-HHHHHH CS
  Hexokinase_1  98 aeeLFdfiakciaefleeegeekkeekeeeelplGftFSFPveqtsldegtlirwtKgfaikdvegkdvvqllqealerkglpvkvvalvNDTvgtl 194
                   aeeL+++ia+c+++f++++++++k      +lplGftFS+P +q+ +d+g+l+rwtKgf+i++veg+dvv ++++a+e+kg+p+k +al+NDT+gtl
    KHJ35323.1 124 AEELWEYIADCLQQFIQSNHMDQK------TLPLGFTFSYPATQNYVDQGILQRWTKGFDIDGVEGHDVVPMFESAIEKKGVPIKLTALINDTTGTL 214
                   *******************99862......4****************************************************************** PP

                   HHHHH CS
  Hexokinase_1 195 lslaY 199
                   +++aY
    KHJ35323.1 215 IASAY 219
                   ****9 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.42
                   SEEEEEEEEEESSS-EEEEEE CS
  Hexokinase_1  65 tnlRvllveLlgeskveitqe 85 
                     +R +lv+L+ +++++i q 
    KHJ35323.1 307 EIFRLVLVDLHDNKDIHIFQG 327
                   469999999998886665544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (489 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       478  (0.0266607); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3466.12
//
Query:       KHJ35324.1  [L=2622]
Description: putative heat repeat protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.3e-177  591.9  11.0   1.3e-177  591.9  11.0    4.0  4  DRIM           Down-regulated in metastasis
    3.4e-06   27.6   0.8       0.54   10.9   0.0    5.8  6  Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
     0.0065   16.6   2.3         20    5.8   0.0    7.0  8  HEAT           HEAT repeat
  ------ inclusion threshold ------
      0.018   15.0  15.3      0.029   14.3   1.3    6.1  6  DUF3385        Domain of unknown function (DUF3385)
      0.031   13.6   0.0      0.031   13.6   0.0    5.3  6  Rcd1           Cell differentiation family, Rcd1-like
      0.084   13.1   2.5       0.11   12.8   0.1    2.5  2  DUF4004        Protein of unknown function (DUF4004)
      0.088   13.1   0.5        1.2    9.5   0.3    3.0  2  NADH-UOR_E     putative NADH-ubiquinone oxidoreductase chain 


Domain annotation for each model (and alignments):
>> DRIM  Down-regulated in metastasis
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0     0.032        81     186     228 ..     114     156 ..      88     160 .. 0.82
   2 !  591.9  11.0  5.1e-181  1.3e-177       2     622 ..     893    1492 ..     892    1493 .. 0.96
   3 ?   -0.9   0.3      0.14   3.7e+02     367     430 ..    1839    1904 ..    1811    1965 .. 0.69
   4 ?   -0.9   0.0      0.15   3.8e+02     344     394 ..    2457    2520 ..    2454    2569 .. 0.85

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.032
        DRIM 186 lplrrqlgflnlledvlkelgsklapflpkllklllyclaaaq 228
                 ++ + +  +l+l++d  + lg+ ++++ +k+l +++ +l++ q
  KHJ35324.1 114 MEKESLEPLLELVTDFAHDLGHLFEKHYSKVLGMIIFILERPQ 156
                 5556667799**************************9998755 PP

  == domain 2  score: 591.9 bits;  conditional E-value: 5.1e-181
        DRIM    2 wslkdlkalLklfakfknpkalykseelyeallelLsngdeeiQklALkclltyknpaltpYkenLenLlddkkfrdeLtkfklssees.ieeehra 97  
                  ws++d+k++L +f+ f+n k+lyks e+y+ ll+lL+ngd eiQk+ALk+l+t+k+p l+pY+enL nLld++kfr+eL     +  ++ +e++hr+
  KHJ35324.1  893 WSRNDQKSMLRVFSAFSNSKSLYKSGEVYTSLLTLLKNGDIEIQKSALKALFTWKDPCLKPYEENLLNLLDEAKFREELGYITNG--QVlVEAQHRS 987 
                  9*********************************************************************************999..889******* PP

        DRIM   98 elmpvllRiLyGrmiskkgssasgkagqqarRaavLrfLaglseeelssFldlalgplkkvleaaetqgsdelkelvnkldevdleevlplrrqlgf 194 
                  +l+pvllRiLyGr +s+k+    g++g++arR+a++r+L   s e+ ++F+++ l++l +++   e + +          +e+  +  l+ r+++g+
  KHJ35324.1  988 KLIPVLLRILYGRSMSRKS----GRQGLEARRQAIFRTL---STEDTGEFINISLDSLRDIQIIREGELQ----------EEILRNFELSSRKLVGL 1067
                  ****************999....77899***********...*****************99877775322..........233456689******** PP

        DRIM  195 lnlledvlkelgsklapflpkllklllyclaaaqrrlksssee..eeeeeeevlasllkniRqlglkcLvdlfsnfgesedwspyldaifeevvsPr 289 
                   +++e +lkelg++++pf++k+l+++lycl++++rrl+  + e  e ++++ + +s lk iRq+++kcL  lf + +++ dw py+++i +ev++Pr
  KHJ35324.1 1068 THMIEGLLKELGTQVKPFIEKILNAILYCLIYSSRRLNFYHGEgvEINNATPMPTSSLKIIRQTAMKCLILLFVSSPKF-DWIPYISVINNEVLKPR 1163
                  ***********************************99988887775566666777**********************99.9**************** PP

        DRIM  290 lekLpsenlqspsaLlkLfltWsssprlaplLakydssvlpavielLsapkakesVvefvldivenllkladeeeeeeedeeeigselLlphvsslL 386 
                  l+kL++e++q++s +l+Lf+tWs+ ++laplL   +++++p+++e+Ls+++ k++V+ f+l++++n+  +a+++ e++++++   ++lL  +++ lL
  KHJ35324.1 1164 LDKLSDESSQGISVILRLFSTWSEDKDLAPLLG-INEQIIPQIMECLSSKHSKDEVKIFILNVIKNVAIHASKDLENSKTKNSLIQSLLNSNMDILL 1259
                  ********************************9.6**********************************9999999999****************** PP

        DRIM  387 eylsalleksaaskkdkskellereleiLsrlaplvedseqassLldlllplLrkpsrrvsektkvelLkilenllrlyde.devdlpekllktlss 482 
                  +++  +l++ +    d skelle+++e+ s+la  v++s q ++L+++++ l+++p+rrvs+ktk++lL +len+++ly+  ++ +l +k++ +lss
  KHJ35324.1 1260 STINIVLKNHQ----DLSKELLESCIETASELAFSVSTSLQGRNLVEISTLLIEQPARRVSPKTKGRLLVMLENFIPLYNLhNDPELENKVFYVLSS 1352
                  *******9995....689***************************************************************98889*********** PP

        DRIM  483 lfsrlkdreaRklLcevlkalakkdpeleevadllsdLNayskrrldepDfdrRlsAFkkineekyksltleqwlpllhnclffirdeeelsi.rsn 578 
                  lf+++kd+e+R++L++vl +l++k++++  +a+++sdLN++ + rldepD+drRl+AF+kin+ +  ++t+ qw+p+l+n+l++ir++ee+++ +sn
  KHJ35324.1 1353 LFGYFKDKESREALSRVLIVLSQKNKDFCDIASICSDLNSFVEGRLDEPDYDRRLKAFNKINDLRKMRYTVLQWTPILYNMLYYIRHDEEFGLlSSN 1449
                  ****************************************************************8899***************************** PP

        DRIM  579 Asellkrfieaaaskseeepskleleellkdillpalkrglrsk 622 
                  +s++++++i+ a s  e++ ++l++e+l+++++lpal +g+r++
  KHJ35324.1 1450 SSDGICQLISIAGSITEQS-ERLAFEQLFSKVILPALFSGIREN 1492
                  *************998888.4689******************86 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.14
        DRIM  367 e.......edeeeigselLlphvsslLeylsalleksaaskkdkskellereleiLsrlaplv.edseqass 430 
                  e       ++ e i +++ + ++ +l++ ++all+++       + ++l++  e+L r+++ + ++s  +s+
  KHJ35324.1 1839 EvksskshDSMELIAKTVTIHYLRDLIQPIQALLKEK------LTLRILRKIEELLHRISHGLmKNSAASSR 1904
                  0444444566778999999999999999999999877......56888888888888885544044433333 PP

  == domain 4  score: -0.9 bits;  conditional E-value: 0.15
        DRIM  344 sVvefvldivenllkladeeeeee.............edeeeigselLlphvsslLeylsalle 394 
                  +V +f+++ ++n+l+ ++ +++ +             + +++  ++ ++ ++s +L +ls+++ 
  KHJ35324.1 2457 PVLKFIFEQLNNILRRETVPPRFSaliskisalellrNLTKTLSKDTITTYISIILMSLSNIMD 2520
                  6999999999999999999988889999999999999777789999999999999999999984 PP

>> Vac14_Fab1_bd  Vacuolar 14 Fab1-binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.0    0.0031       7.8      16      50 ..    1077    1111 ..    1062    1140 .. 0.83
   2 ?   -2.6   0.0       3.3   8.5e+03      26      54 ..    1199    1229 ..    1196    1239 .. 0.69
   3 ?   -1.1   0.0       1.2     3e+03      21      76 ..    1678    1737 ..    1668    1750 .. 0.60
   4 ?    1.7   0.0      0.16   4.1e+02      19      60 ..    1721    1762 ..    1707    1778 .. 0.83
   5 !   10.9   0.0   0.00021      0.54      10      85 ..    2173    2252 ..    2164    2259 .. 0.71
   6 ?   -4.1   0.0         7   1.8e+04      47      76 ..    2488    2518 ..    2487    2522 .. 0.64

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0031
  Vac14_Fab1_bd   16 alekkikeyleeivkpvlkcfsDkdsrvRyyacEs 50  
                      l++++k+++e+i++ +l c+  +++r+ +y  E 
     KHJ35324.1 1077 ELGTQVKPFIEKILNAILYCLIYSSRRLNFYHGEG 1111
                     46778**************************8885 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 3.3
  Vac14_Fab1_bd   26 eeivkpvlkcfsDkdsr..vRyyacEslyni 54  
                     e+i++ +++c+s k s+  v+ +    + n+
     KHJ35324.1 1199 EQIIPQIMECLSSKHSKdeVKIFILNVIKNV 1229
                     7999******987765422666655555555 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1.2
  Vac14_Fab1_bd   21 ikeyleeivkpvlkcfsDkdsrv...RyyacEslyniakvakgevlk.llneifdalvkl 76  
                     +++  + +++p++k+++Dkd+ +   R  ++  +  + k + +e l+ +l  +++ ++++
     KHJ35324.1 1678 TEDLNSYFLAPLMKYLHDKDESTvslRVPVAIIIVKLLKLLPQEQLNqKLPAVLTDVCHI 1737
                     5667778999********998531114444444455555555555543455555555555 PP

  == domain 4  score: 1.7 bits;  conditional E-value: 0.16
  Vac14_Fab1_bd   19 kkikeyleeivkpvlkcfsDkdsrvRyyacEslyniakvakg 60  
                     +++++ l  +++ v ++++ k+++ R  a E+l ni+ ++  
     KHJ35324.1 1721 EQLNQKLPAVLTDVCHILRSKSQEARDMARETLINISIILGP 1762
                     4588899999**************************877655 PP

  == domain 5  score: 10.9 bits;  conditional E-value: 0.00021
  Vac14_Fab1_bd   10 Laavaialekk....ike.yleeivkpvlkcfsDkdsrvRyyacEslyniakvakgevlkllneifdalvklvaDsdesvk 85  
                     L  + + ++k+    ++e    ++v+ v+  ++D+++++R  a E l ni  +a  e ++++ +++    k  +D+ + v+
     KHJ35324.1 2173 LEVIHLLISKSapdfVQEvLATTFVPLVFILVNDESEKCRMSAGELLRNIFAKADPERVRTFLSLLRSWLKK-SDNSSMVR 2252
                     55555556666334433303456789999*********************9999999999998888776664.45555555 PP

  == domain 6  score: -4.1 bits;  conditional E-value: 7
  Vac14_Fab1_bd   47 acEslyniakvakgevlk.llneifdalvkl 76  
                     a E l n++k++ ++ ++ +++ i+  l+++
     KHJ35324.1 2488 ALELLRNLTKTLSKDTITtYISIILMSLSNI 2518
                     6788889998865555442677666666655 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.5   0.0       0.4     1e+03       1      29 [.     651     679 ..     651     680 .. 0.88
   2 ?   -0.7   0.0      0.94   2.4e+03       4      24 ..     923     943 ..     920     944 .. 0.91
   3 ?   -1.1   0.0       1.3   3.4e+03       1      14 [.    1201    1214 ..    1201    1215 .. 0.88
   4 ?   -1.5   0.0       1.7   4.3e+03       1      30 [.    1481    1510 ..    1481    1511 .. 0.90
   5 ?   -3.4   0.0         7   1.8e+04       6      27 ..    1735    1756 ..    1734    1757 .. 0.84
   6 ?    0.5   0.0      0.38   9.7e+02       7      30 ..    1987    2014 ..    1985    2014 .. 0.82
   7 !    5.8   0.0    0.0079        20       1      27 [.    2196    2222 ..    2196    2225 .. 0.91
   8 ?   -3.3   0.1       6.3   1.6e+04       2      18 ..    2238    2253 ..    2237    2254 .. 0.74

  Alignments for each domain:
  == domain 1  score: 0.5 bits;  conditional E-value: 0.4
                 HHHHHHHHHT-SSHHHHHHHHHHHHHHHH CS
        HEAT   1 llPlllkllsDpspeVReaAakaLgalae 29 
                 ++++l+ +ls  s +VR  +++ L ++++
  KHJ35324.1 651 IINTLIYNLSTGSHDVRLLSLLILEQICK 679
                 67778888899999*************97 PP

  == domain 2  score: -0.7 bits;  conditional E-value: 0.94
                 HHHHHHT-SSHHHHHHHHHHH CS
        HEAT   4 lllkllsDpspeVReaAakaL 24 
                  ll+ll+  + e+ ++A+kaL
  KHJ35324.1 923 SLLTLLKNGDIEIQKSALKAL 943
                 58999**************98 PP

  == domain 3  score: -1.1 bits;  conditional E-value: 1.3
                  HHHHHHHHHT-SSH CS
        HEAT    1 llPlllkllsDpsp 14  
                  ++P ++++ls++++
  KHJ35324.1 1201 IIPQIMECLSSKHS 1214
                  79********9876 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 1.7
                  HHHHHHHHHT-SSHHHHHHHHHHHHHHHHC CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgalaev 30  
                  +lP+l + ++ +s  VR+  +k +++l++v
  KHJ35324.1 1481 ILPALFSGIRENSEIVRREYLKVMTQLVRV 1510
                  799****9*99******9999999999876 PP

  == domain 5  score: -3.4 bits;  conditional E-value: 7
                  HHHHT-SSHHHHHHHHHHHHHH CS
        HEAT    6 lkllsDpspeVReaAakaLgal 27  
                  ++ l+++s e R++A ++L ++
  KHJ35324.1 1735 CHILRSKSQEARDMARETLINI 1756
                  6778999*******99998877 PP

  == domain 6  score: 0.5 bits;  conditional E-value: 0.38
                  HHHT-....SSHHHHHHHHHHHHHHHHC CS
        HEAT    7 kllsD....pspeVReaAakaLgalaev 30  
                   ll D    p+ e+  aA+k L+++++v
  KHJ35324.1 1987 PLLGDavvrPEEEIKIAAFKLLTTIVKV 2014
                  566777777999*************985 PP

  == domain 7  score: 5.8 bits;  conditional E-value: 0.0079
                  HHHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT    1 llPlllkllsDpspeVReaAakaLgal 27  
                  ++Pl+  l +D+s + R++A + L ++
  KHJ35324.1 2196 FVPLVFILVNDESEKCRMSAGELLRNI 2222
                  589999*99***********9999988 PP

  == domain 8  score: -3.3 bits;  conditional E-value: 6.3
                  HHHHHHHHT-SSHHHHH CS
        HEAT    2 lPlllkllsDpspeVRe 18  
                  l  +lk  sD+s+ VR 
  KHJ35324.1 2238 LRSWLKK-SDNSSMVRL 2253
                  5566664.9*******7 PP

>> DUF3385  Domain of unknown function (DUF3385)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.0       4.2   1.1e+04     123     150 ..      97     123 ..      89     129 .. 0.74
   2 ?    1.4   0.0      0.11   2.7e+02      95     147 ..    1054    1105 ..    1048    1110 .. 0.72
   3 ?    0.7   0.1      0.17   4.5e+02      97     148 ..    1164    1221 ..    1125    1233 .. 0.71
   4 ?    2.5   0.0     0.046   1.2e+02     125     158 ..    1477    1509 ..    1430    1511 .. 0.75
   5 ?   14.3   1.3   1.1e-05     0.029       7     153 ..    1610    1753 ..    1607    1760 .. 0.75
   6 ?   -2.1   0.1       1.3   3.2e+03      87     136 ..    2462    2518 ..    2424    2527 .. 0.69

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 4.2
     DUF3385 123 vpfLdqiipallsvirtteesnlrefll 150
                 + f ++i++++ ++i+++e+ + +e ll
  KHJ35324.1  97 IHFENEIMNKFATYIEKMEK-ESLEPLL 123
                 567789999****9999988.5555554 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.11
     DUF3385   95 lkdpsls.shhaavveaimnifktlglkcvpfLdqiipallsvirtteesnlre 147 
                  l++  ls  +  +  + i   +k+lg+++ pf+++i++a+l ++  +++  +++
  KHJ35324.1 1054 LRNFELSsRKLVGLTHMIEGLLKELGTQVKPFIEKILNAILYCLIYSSR--RLN 1105
                  5555555233445567777899******************998875443..444 PP

  == domain 3  score: 0.7 bits;  conditional E-value: 0.17
     DUF3385   97 dpslsshhaavveaimnifktlglkc..vp...fLdqiipallsvirttees.nlref 148 
                    +ls+  ++ +++i+  f+t +      p   + +qiip++++++++ +++ +++ f
  KHJ35324.1 1164 LDKLSDESSQGISVILRLFSTWSEDKdlAPllgINEQIIPQIMECLSSKHSKdEVKIF 1221
                  457888889999999999999554433355333558*********9976542034444 PP

  == domain 4  score: 2.5 bits;  conditional E-value: 0.046
     DUF3385  125 fLdqiipallsvirtteesnlrefllqqLatLvs 158 
                  f + i+pal+s ir+ +e  +r  +l+ +++Lv+
  KHJ35324.1 1477 FSKVILPALFSGIRENSE-IVRREYLKVMTQLVR 1509
                  667899999999998887.788888899999887 PP

  == domain 5  score: 14.3 bits;  conditional E-value: 1.1e-05
     DUF3385    7 eypqLLelLlnilkteqsqsirrevikllGilGALDPykhkqveeraedkkrreeaaretdlsllmvglspsn.eeyyptvvinaLlril..kdpsl 100 
                  +y  L++ L++ +    + + +++vi+l+G +  +DP +  ++++ +e  ++ +++ ++   +l+++   +++ +e   ++ ++ L++ l  kd+s 
  KHJ35324.1 1610 QYRALIRRLIGYID--LKPEYKKQVIRLIGKI--IDPLTSVSISNINE--ETYVDTPTKDRSTLMITLPGQQKiTEDLNSYFLAPLMKYLhdKDEST 1700
                  67778888888776..568999********99..9**99966653333..3445555555555555666666678888999*********6667777 PP

     DUF3385  101 sshhaavveaimnifktlglkc.vpfLdqiipallsvirtteesnlrefllqqL 153 
                   s +  v   i++ +k l  ++  + L+ ++ ++ +++r+ ++ + r++  + L
  KHJ35324.1 1701 VSLRVPVAIIIVKLLKLLPQEQlNQKLPAVLTDVCHILRSKSQ-EARDMARETL 1753
                  78888888889999***99999789**************9877.6666655555 PP

  == domain 6  score: -2.1 bits;  conditional E-value: 1.3
     DUF3385   87 vinaLlrilkdpslsshhaavveai......mnifktlglkc.vpfLdqiipallsv 136 
                  ++++L +il+ +++ +  +a ++ i       n  ktl+    +++++ i+ +l ++
  KHJ35324.1 2462 IFEQLNNILRRETVPPRFSALISKIsalellRNLTKTLSKDTiTTYISIILMSLSNI 2518
                  556667777777777777777766666555556666666665445555555555544 PP

>> Rcd1  Cell differentiation family, Rcd1-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.0      0.15   3.7e+02     137     178 ..     649     688 ..     613     760 .. 0.65
   2 ?   -1.1   0.6      0.36   9.3e+02      59     188 ..    1168    1303 ..    1159    1363 .. 0.65
   3 ?   -1.9   0.1      0.63   1.6e+03      93     137 ..    1684    1729 ..    1678    1756 .. 0.74
   4 ?    0.5   0.1      0.12     3e+02      61     126 ..    1954    2015 ..    1943    2062 .. 0.84
   5 ?   13.6   0.0   1.2e-05     0.031     109     212 ..    2166    2261 ..    2156    2294 .. 0.85
   6 ?   -4.0   0.1       2.8   7.1e+03      48      86 ..    2385    2423 ..    2382    2426 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.15
        Rcd1 137 teivplclrimesGselsktvAtfIlqkiLlddeGLeYicqt 178
                 + i++ ++ ++ +Gs   + +++ Il++i    eG + + +t
  KHJ35324.1 649 NSIINTLIYNLSTGSHDVRLLSLLILEQICK--EGKQSVPET 688
                 5677788888888888888888888888764..344444333 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.36
        Rcd1   59 taaesnrvcnaLallqcvashpetrklf.lkakiplyLypfLnttsksrefEylRltsLgvigaLvktddke.........vikflldteivplclr 145 
                  + ++s+ +  +L l+ +  ++++   l+ ++ +i+  ++  L+   ++++ + +++ +L+vi+ ++ + +k+         +i+ ll+++ + ++l 
  KHJ35324.1 1168 SDESSQGISVILRLFSTWSEDKDLAPLLgINEQIIPQIMECLS---SKHSKDEVKIFILNVIKNVAIHASKDlensktknsLIQSLLNSN-MDILLS 1260
                  5556666666666666666666655543355555555544444...55566778899999998776533333223333334677777666.366677 PP

        Rcd1  146 imesGselsktvAtfIlqkiLlddeGLeYicqtaerfsavaev 188 
                  ++++  +  + ++ ++l+  + + + L + ++t  +  +++e+
  KHJ35324.1 1261 TINIVLKNHQDLSKELLESCIETASELAFSVSTSLQGRNLVEI 1303
                  7777777777777777777777766666666666555555555 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 0.63
        Rcd1   93 lyLypfLn.ttsksrefEylRltsLgvigaLvktddkevikflldt 137 
                  ++L p+++ +++k++++ +lR+    +i  L+k   +e +++ l  
  KHJ35324.1 1684 YFLAPLMKyLHDKDESTVSLRVPVAIIIVKLLKLLPQEQLNQKLPA 1729
                  7999999978899999999999999999999997766666655544 PP

  == domain 4  score: 0.5 bits;  conditional E-value: 0.12
        Rcd1   61 aesnrvcnaLallqcvashpetrklflkakiplyLypfLnttsksrefEylRltsLgvigaLvktd 126 
                   +++ +c a++ll  v   ++  +l ++a+++ ++ p+L    + r+ E +++++ +++ ++vk  
  KHJ35324.1 1954 YSYKMICFAFDLLRLVL--KKYDNLRISANLIDFI-PLLG-DAVVRPEEEIKIAAFKLLTTIVKVP 2015
                  56678999999***999..6777899999999996.9998.78889*****************954 PP

  == domain 5  score: 13.6 bits;  conditional E-value: 1.2e-05
        Rcd1  109 EylRltsLgvigaLvktddkevikflldteivplclrimesGselsktvAtfIlqkiLlddeGLeYicqtaerfsavaevLnkmvvslteepssrll 205 
                  E  Rl+ L+vi  L+ ++ ++ ++ +l t +vpl++  ++  se +++ A ++l  i+ +          +er+ +  ++L++ +++  +++ +rl 
  KHJ35324.1 2166 EGGRLSVLEVIHLLISKSAPDFVQEVLATTFVPLVFILVNDESEKCRMSAGELLRNIFAKA--------DPERVRTFLSLLRSWLKKSDNSSMVRLS 2254
                  6669*****************************************************9886........5777777777777777766666666766 PP

        Rcd1  206 khvircY 212 
                   +v   Y
  KHJ35324.1 2255 FQVFSLY 2261
                  6666666 PP

  == domain 6  score: -4.0 bits;  conditional E-value: 2.8
        Rcd1   48 siYpllspptltaaesnrvcnaLallqcvashpetrklf 86  
                  +i+++l+ + lt+      ++ L  l +va+ ++ +  f
  KHJ35324.1 2385 KIFKILDMNVLTQMLADEAVKNLVFLASVANANDLKMSF 2423
                  788999999999999999999999999999999988877 PP

>> DUF4004  Protein of unknown function (DUF4004)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.1   4.2e-05      0.11     114     168 ..     665     719 ..     647     725 .. 0.89
   2 ?   -3.9   0.4       5.3   1.4e+04     103     145 ..    1206    1248 ..    1196    1282 .. 0.53

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 4.2e-05
     DUF4004 114 fkellvlvvlekllksgeisleEgkeilellkenyeklkekevelvlvrklGvsv 168
                   +ll l++le++ k+g+ s+ E+  i+ +++++  +l+++++  +l+rklG  +
  KHJ35324.1 665 DVRLLSLLILEQICKEGKQSVPETLSIMMMIENTHVDLQTARSVSMLIRKLGALY 719
                 45799***********************************************865 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 5.3
     DUF4004  103 eelvkkkeefsfkellvlvvlekllksgeisleEgkeilellk 145 
                  +e++++k++ ++ ++++l v++++  +++  le+ k+  +l++
  KHJ35324.1 1206 MECLSSKHSKDEVKIFILNVIKNVAIHASKDLENSKTKNSLIQ 1248
                  4444444445555555555555554444444444444333333 PP

>> NADH-UOR_E  putative NADH-ubiquinone oxidoreductase chain E
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.5     4e+03      34      48 ..     535     549 ..     511     556 .. 0.85
   2 ?    9.5   0.3   0.00046       1.2      10      61 ..    1198    1250 ..    1190    1259 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.5
                 EE-SS--SHHHHHHH CS
  NADH-UOR_E  34 lfevgdFsavqksad 48 
                 l+ev d savq s++
  KHJ35324.1 535 LLEVLDCSAVQSSIK 549
                 89*********9986 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.00046
                  TTTTHHHHHHHHHTTS-TT-EEEEEE-SS--SHHHHHHHTT-TTT.-EE-S-- CS
  NADH-UOR_E   10 kdnllerlkelldkevkegevaiflfevgdFsavqksadlikerg.deLlnsL 61  
                  +++++ ++ e l ++++++ev if+++v    a++ s dl +++  ++L+ sL
  KHJ35324.1 1198 NEQIIPQIMECLSSKHSKDEVKIFILNVIKNVAIHASKDLENSKTkNSLIQSL 1250
                  67899999*********************9999**999997766514566776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2622 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1072  (0.0597914); expected 358.6 (0.02)
Passed bias filter:                      516  (0.0287802); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.35u 0.31s 00:00:01.66 Elapsed: 00:00:00.51
# Mc/sec: 15560.36
//
Query:       KHJ35325.1  [L=245]
Description: putative mitochondrial protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-37  127.8   1.7    2.9e-37  127.5   0.1    1.9  3  ApoO      Apolipoprotein O


Domain annotation for each model (and alignments):
>> ApoO  Apolipoprotein O
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0      0.16   2.9e+03      90     111 ..       7      29 ..       3      41 .. 0.66
   2 !  127.5   0.1   1.6e-41   2.9e-37       6     129 ..      71     196 ..      57     197 .. 0.95
   3 ?   -3.3   0.1      0.45   8.1e+03      35      37 ..     223     225 ..     204     242 .. 0.46

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 0.16
        ApoO  90 lkRvlyPlal.gglaaslfyPqt 111
                 + R + P+++ g++a   f P t
  KHJ35325.1   7 IQRHVAPILTsGVIAGAFFCPST 29 
                 66777777652556667777877 PP

  == domain 2  score: 127.5 bits;  conditional E-value: 1.6e-41
        ApoO   6 rtpseeptdrLeegvrslRkslepytsavqdelnkvkskvetaeqsvtdtiasLkepp...edllPrlgyilvagLaGsilarrrsilkRvlyPlalgg 101
                 ++++++ tdr++  ++++R++l++++s ++++lnk++++++++e+s+t+tiasL+++p   e+l+P+++y++va++aGsi+arr +il+R++ Pla+g+
  KHJ35325.1  71 KSKKPTVTDRVAVEIGKARLQLYTHISFLEEKLNKFMDSAFNLEESFTSTIASLAPEPytgEKLMPGSLYVIVAAMAGSIIARRHNILVRATLPLAVGI 169
                 345589********************************************************************************************* PP

        ApoO 102 laaslfyPqtakntgdllykyeqekvpa 129
                 +a ++++P t +n+++l++kyeq k+p+
  KHJ35325.1 170 TAGWTLLPITSQNISNLVWKYEQ-KFPV 196
                 ***********************.9997 PP

  == domain 3  score: -3.3 bits;  conditional E-value: 0.45
        ApoO  35 qde 37 
                  ++
  KHJ35325.1 223 VET 225
                 111 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (245 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       872  (0.0486363); expected 358.6 (0.02)
Passed bias filter:                      589  (0.0328518); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.25s 00:00:00.72 Elapsed: 00:00:00.43
# Mc/sec: 1724.33
//
Query:       KHJ35326.1  [L=472]
Description: putative inosine-uridine preferring nucleoside hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.089   13.2   0.3      0.089   13.2   0.3    2.3  2  FAM163    FAM163 family
      0.093   12.7   0.1      0.093   12.7   0.1    2.4  2  DUF4589   Domain of unknown function (DUF4589)


Domain annotation for each model (and alignments):
>> FAM163  FAM163 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.3   9.9e-06     0.089      30      85 ..     129     182 ..     128     203 .. 0.72
   2 ?    0.4   0.9     0.086   7.7e+02      41      85 ..     309     348 ..     302     378 .. 0.42

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 9.9e-06
      FAM163  30 LqYYCCkkdeseeeeeeepefavleplacnacssevvdgsaatangpaelssslak 85 
                 L YY Ck d+s++ ++ e e+++ e++  +a+++e ++++ ++  +pa++s+++++
  KHJ35326.1 129 LEYYLCKDDDSKT-KNTESELEKHEKMEVKAITHEKIKKKGEM-APPARISQKRTR 182
                 89*********99.66777788888888899999999866654.556666555333 PP

  == domain 2  score: 0.4 bits;  conditional E-value: 0.086
      FAM163  41 eeeeeeepefavleplacnacssevvdgsaatangpaelssslak 85 
                 +e   e +e  ++++ + n+++++  ++ ++++++ ++ls + + 
  KHJ35326.1 309 DE---EGEET-KENKKTKNSSEETLGNADSESLTKRKNLSPQ-HS 348
                 22...22222.2222212222222222222222222222222.22 PP

>> DUF4589  Domain of unknown function (DUF4589)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.1     1e-05     0.093     146     231 ..     132     223 ..     125     230 .. 0.58
   2 ?    1.7   3.7     0.024   2.1e+02     151     210 ..     309     370 ..     305     415 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 1e-05
     DUF4589 146 alCcDddeeedeeeeelhlqeekedeaslkedpeeeelsssplppseellenggl........ssshsfppk.gpkvvprksalkp......eqrrkll 229
                  lC Ddd + ++ e+el+++e+ e +a ++e+ +++   ++p++ s++ +    l        +ss+  ppk g+k                 ++rk++
  KHJ35326.1 132 YLCKDDDSKTKNTESELEKHEKMEVKAITHEKIKKKGEMAPPARISQKRTRDQILaelkavreASSNLAPPKlGSK---------FkkfgetRTERKII 221
                 59********9999******99999898888888887666665555444444444211122333333333332222.........11222224567777 PP

     DUF4589 230 rn 231
                 r+
  KHJ35326.1 222 RD 223
                 66 PP

  == domain 2  score: 1.7 bits;  conditional E-value: 0.024
     DUF4589 151 ddeeedeeeeelhlqeekedeaslkedpeeeelsssplppseellenggl.ssshsfppk.g 210
                 d+e e+++e++ ++++ +e  ++ ++++  ++ + sp+  s++ l n ++ + s+  p + +
  KHJ35326.1 309 DEEGEETKENKKTKNSSEETLGNADSESLTKRKNLSPQHSSQQELRNYFQtPLSDKLPKEaN 370
                 55566666666666666667788899999999899998888776666666689988887742 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (472 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1419  (0.0791455); expected 358.6 (0.02)
Passed bias filter:                      400  (0.0223102); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 3225.15
//
Query:       KHJ35327.1  [L=546]
Description: putative cwfj domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-27   95.4   0.0    3.7e-27   94.6   0.0    1.4  1  CwfJ_C_1  Protein similar to CwfJ C-terminus 1
    1.5e-13   51.5   0.1    3.4e-13   50.3   0.1    1.6  1  CwfJ_C_2  Protein similar to CwfJ C-terminus 2
  ------ inclusion threshold ------
        0.1   13.4   0.0       0.66   10.7   0.0    2.1  2  HIT       HIT domain


Domain annotation for each model (and alignments):
>> CwfJ_C_1  Protein similar to CwfJ C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.6   0.0   6.2e-31   3.7e-27      10     115 ..     306     432 ..     298     441 .. 0.89

  Alignments for each domain:
  == domain 1  score: 94.6 bits;  conditional E-value: 6.2e-31
                 HHHH-S----SS---SS--S-B-SSEEEE---S-S............STT-EEEEESS--SSTTSS-H......HHHHHHHHHHHHHHHHHHH...TT- CS
    CwfJ_C_1  10 sldsClfClsnpklekhlivsignkvYlalpkgpL............ssgHvliipieHisallslde......evldeirkfrkalvkmykk...qdk 87 
                 s+d+C+fClsnp+le hl+ sig+  Y++++kgpL              gH+liip+ H ++l s++e      ++  e++++rkal +m  k    + 
  KHJ35327.1 306 SPDECFFCLSNPNLETHLVSSIGEDSYITVAKGPLttskiheqygidFPGHLLIIPLTHSPTLASIPEednikeKTFIEMNQYRKALQEMIGKisnNKL 404
                 689******************************************9999**************999887777777888************655111455 PP

                 -EEEEEE-SSS-----EEEEE--HHHHT CS
    CwfJ_C_1  88 davvfEissersvHlaiqvipvpksisk 115
                  av++Eis+++ vH+++q ipvp+++ +
  KHJ35327.1 405 GAVTYEISKSNGVHIHWQFIPVPETSLS 432
                 89*********************98866 PP

>> CwfJ_C_2  Protein similar to CwfJ C-terminus 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3   0.1   5.7e-17   3.4e-13      25      99 .]     464     545 ..     454     545 .. 0.83

  Alignments for each domain:
  == domain 1  score: 50.3 bits;  conditional E-value: 5.7e-17
                 S--EEEEE.........TTT-..-EEE----HHHH-TTHHHHHHHHHTT--TTT.SS------S--H.HHHHHHHHHHTTT--X CS
    CwfJ_C_2  25 lpyfyvqf.........dykgekgyghviedeerfdlqFareviaglLdlekrrkwrkpkrqskeeeekrveaFkkawkkyDwT 99 
                   yf v++         +   +  +   i ++ +f+lqF+r v+a+lL++e+r++wr+ + qsk+ee+ + e++k+a+k++D+T
  KHJ35327.1 464 EDYFRVWIwtppnvkspQ-GHTECLTMSISKNLKFSLQFGRIVLAKLLGIEDRIQWRH-CMQSKDEEKLDNEKLKAAFKEFDFT 545
                 567777766666665432.2333555556999**************************.************************9 PP

>> HIT  HIT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.38   2.3e+03      72      90 ..      76      94 ..      10      95 .. 0.87
   2 ?   10.7   0.0   0.00011      0.66      26      75 ..     354     413 ..     351     423 .. 0.67

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.38
                EEEEEESGGGT-SSSS-EE CS
         HIT 72 rvvinngahagqsvahlHi 90
                ++vin+ ++    v++lH+
  KHJ35327.1 76 KLVINKLEKNDEIVPNLHF 94
                6789999999999999996 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00011
                 SSEEEEEESSTGCSGGGCC..HHHHHHHHHHHHHHHHHHHTCT........TCCCEEEEE CS
         HIT  26 pghlLvipkkhlselhdlt..eeelakllsavkkvakalqkkf........knkglrvvi 75 
                 pghlL+ip +h ++l +++  +++  k + ++++  kalq+ +         + ++++ +
  KHJ35327.1 354 PGHLLIIPLTHSPTLASIPeeDNIKEKTFIEMNQYRKALQEMIgkisnnklGAVTYEISK 413
                 9******************87666677777777777777765544433333333444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (546 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       376  (0.0209716); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3894.56
//
Query:       KHJ35328.1  [L=2175]
Description: putative ring finger domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.4e-18   66.8  14.8    4.2e-18   65.3  14.8    1.9  1  zf-UBR    Putative zinc finger in N-recognin (UBR box)
    0.00016   21.4   0.1    0.00033   20.4   0.1    1.5  1  ClpS      ATP-dependent Clp protease adaptor protein ClpS


Domain annotation for each model (and alignments):
>> zf-UBR  Putative zinc finger in N-recognin (UBR box)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.3  14.8   4.7e-22   4.2e-18       1      70 []      91     160 ..      91     160 .. 0.92

  Alignments for each domain:
  == domain 1  score: 65.3 bits;  conditional E-value: 4.7e-22
      zf-UBR   1 kCtkvfkkgevvyrCltCsldetsviCeeCfkaskHeghelvelstkrng.gvCdCGdeeawkeegfCkkh 70 
                 +C+++fk+ge++yrC+tC+ d+t+v+C++C+++s+H+gh + ++s+++++ g+CdCGd+eaw+ + +C  h
  KHJ35328.1  91 SCGHIFKSGEATYRCKTCGADDTCVLCSKCYDSSDHNGHMV-YVSVSSGNsGCCDCGDPEAWRVPVHCAIH 160
                 5***************************************9.666665555************999**987 PP

>> ClpS  ATP-dependent Clp protease adaptor protein ClpS
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.1   3.7e-08   0.00033       5      68 ..     241     305 ..     237     309 .. 0.86

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 3.7e-08
                 -EEEEEES-S-S-HHHHHHHHHHHSSS-HHHHHHHHHHHHHHSEEEEEEE.-HHHHHHHHHHHHH CS
        ClpS   5 qYkvvLlNDdvttmefVvevLqkvfgkskeeAteimlevhreGravvgvg.treiaetkveqver 68 
                 ++ ++L+ND+ +t+  V +   ++++ s++e  + + e +  Gr++++   + +++ + ++ +e+
  KHJ35328.1 241 EFALLLWNDEKHTVIEVRDQVARACKVSSQESLKRAYETDDIGRSIIKYSyDVDELLKVAQIIEQ 305
                 7899*******************************************976467766666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2175 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       666  (0.0371465); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 1.04u 0.30s 00:00:01.34 Elapsed: 00:00:00.49
# Mc/sec: 13218.64
//
Query:       KHJ35329.1  [L=842]
Description: putative cullin family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
     8e-189  629.2  10.1   1.1e-188  628.7  10.1    1.2  1  Cullin        Cullin family
      2e-26   91.8   1.9    9.3e-26   89.7   1.9    2.3  1  Cullin_Nedd8  Cullin protein neddylation domain


Domain annotation for each model (and alignments):
>> Cullin  Cullin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  628.7  10.1  1.3e-192  1.1e-188       1     618 []      30     735 ..      30     735 .. 0.96

  Alignments for each domain:
  == domain 1  score: 628.7 bits;  conditional E-value: 1.3e-192
      Cullin   1 WekleeaiqeilkknvsklsfeelYravynlvlskekkqgekLydklkelieehlkellkell.......................keesdeelLkalk 76 
                 W+ l++++ ei++kn+s+lsfe++Yra y++vl   kkqg++Lyd++ ++ +++l ++  +++                       ++ ++e++Lk +k
  KHJ35329.1  30 WDILKSSLMEIHTKNASTLSFEQIYRASYKMVL---KKQGDQLYDRVIKFEQDWLCSVTMPQIrtlisnnlvsfafdsftgvtaneRRLTGEQFLKGIK 125
                 99*******************************...999**********************99*****************9999988888899****** PP

      Cullin  77 keWedhktsmkmirdifmyldrvyvk..klpsvydlglelfrdhvfr.......iklkdrlieallkliekeRegevidrsllksviemlvelgedse. 165
                  +Wedh + ++m +d++my+drvy++  +++s++++ + lfrdh++r       + l d l++ +l++i++eR+g+vi++sl++s++ ml+ l+e++  
  KHJ35329.1 126 ASWEDHIMITNMTTDVLMYMDRVYCAdnRKASIFTTFMGLFRDHILRskpagydVILFDILNAIILDQIDMERDGDVINKSLIRSCVYMLEGLYETDFe 224
                 ************************9998999***************77*****9667799*********************************987768 PP

      Cullin 166 ..dkkvYeeeFekafleateefYraeaeellaensvaseYlkkaeerleeEeervekyldsstkkkllevleeelikkhleelleee...lkklledek 259
                   d+k+Y + Fe ++l+++++fY++e+++ll+++ +as++l+++++rleeEe+r++++++  t++k+ +++e e+i++h++e+l++e   +k+++e+++
  KHJ35329.1 225 naDEKLYLTVFEVEYLKNSQKFYQKECTKLLRSS-DASTWLRQTKRRLEEEESRCQTTISILTAPKISKIIEAEMISAHISEFLAMEisgVKAMIENDR 322
                 88889***************************75.999************************************************9999*****999* PP

      Cullin 260 ledLkrlykllsrvd.gleeLrkaleeyikeegkaivkdake.................................kektedakkyveklLelkdkfdkl 324
                 ledL++ly+ll+rvd   e+L+ al++ ++e g++i+++                                    + + ++a+++v+++L lkdkf+ l
  KHJ35329.1 323 LEDLTLLYQLLARVDsLKEPLMIALQSRVVELGSDINNNFLVadnsnntialqdqgektieriekqnslsksgtaARQLTAAIRWVDEVLRLKDKFNML 421
                 **************879999*****************98655999******************************9999******************** PP

      Cullin 325 vkeafnndkefekaldeafeefvnknkvnsksaellakYiDelLkkglkglseeeleekldkvlvlfryiedKDvFekyYkkhLakRLllgksasddaE 423
                 ++++ ++d  +++a++++f++f+n   + ++++e+l+++iD++Lk+g kg++e+e+++ ldk+++l++yi+dKD+Fe+yYkkhLa+RLl +ks+s d E
  KHJ35329.1 422 WEQCLHKDLVLQTAITKSFSQFIN---LFPRCSEYLSLFIDDNLKRGIKGKTETEIDDLLDKAVTLLQYIHDKDMFERYYKKHLARRLLYKKSESGDVE 517
                 ************************...99********************************************************************** PP

      Cullin 424 ksmiskLkeecGseftskLegMfkDiklskdlnkefkeylee.ekkkkkkvdlsvkVLtagaWpterskese........vsvklpeeledlieeFeef 513
                 k+misk+k+e+G++ft+k+egMf+D+++s++l++++++++++  +++k+k+dl +++Lt+++Wp+e++   +        v++++p+e+  l+e+F++f
  KHJ35329.1 518 KQMISKMKQEIGNSFTTKIEGMFRDMTISDELTSQYRRHTQDsGSSNKSKIDLGINILTTNYWPIESMGGGSalradrirVPCIWPSEIVFLQESFKRF 616
                 ***************************************99885666689**************9998743369************************* PP

      Cullin 514 YkskhsgrkLtWlhslgsaelkatfpk...........kkyelqvstfqmvvLllFnd..eeeklsyeeiqeatglpekeLkrtLqsLavakkarvLlk 599
                 Y++ ++gr++tWl  lgsa++++ fpk           ++ye+ v t+ m+vLllFn+  + e+ls+eeiqe+t++p+++L r L  L+v++k++vL k
  KHJ35329.1 617 YLKDRNGRQITWLGFLGSADIRCFFPKvagkegtlgrdRRYEIIVPTYGMIVLLLFNNvaDCESLSFEEIQENTSIPSSDLSRILFTLSVPPKCKVLNK 715
                 ***************************8776665555449*****************888779************************************ PP

      Cullin 600 epksk.dveptdefsvNaeF 618
                  p++k   +p+d+fs+Na F
  KHJ35329.1 716 IPANKeLPKPGDQFSFNATF 735
                 **77615678********98 PP

>> Cullin_Nedd8  Cullin protein neddylation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.7   1.9     1e-29   9.3e-26       2      62 ..     772     832 ..     771     833 .. 0.97

  Alignments for each domain:
  == domain 1  score: 89.7 bits;  conditional E-value: 1e-29
  Cullin_Nedd8   2 RklaiqaaIVRiMKsrktlshneLvsevieqlskrftpsiadikkrIesLiekeYleRden 62 
                   R ++i+ +IVRiMK+rk+l+h+eL+se+i+qls+rf+p+i+++k+rIesLie+eY+eR en
    KHJ35329.1 772 RGNVIDTVIVRIMKTRKQLAHQELFSETISQLSSRFKPDINLMKRRIESLIEREYIERVEN 832
                   889*******************************************************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (842 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1002  (0.0558871); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.70u 0.26s 00:00:00.96 Elapsed: 00:00:00.42
# Mc/sec: 6052.83
//
Query:       KHJ35330.1  [L=201]
Description: putative rna binding protein pym [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    8.2e-14   51.2   2.9    1.5e-13   50.3   2.9    1.5  1  Mago-bind  Mago binding


Domain annotation for each model (and alignments):
>> Mago-bind  Mago binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3   2.9   8.5e-18   1.5e-13       1      27 []      18      44 ..      18      44 .. 0.99

  Alignments for each domain:
  == domain 1  score: 50.3 bits;  conditional E-value: 8.5e-18
   Mago-bind  1 GeriIpaSqRpDGtvRKeirVRpGYtP 27
                Ger+Ip+S R+DGt RKei++RpGY P
  KHJ35330.1 18 GERHIPSSIRADGTKRKEIKIRPGYKP 44
                9************************99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1817  (0.101344); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.42
# Mc/sec: 1432.22
//
Query:       KHJ35331.1  [L=488]
Description: putative inositol phosphosphingolipids phospholipase c protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.6e-13   48.3   0.0    1.3e-12   47.7   0.0    1.3  1  Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.7   0.0   7.3e-17   1.3e-12       2     206 ..      12     290 ..      11     325 .. 0.78

  Alignments for each domain:
  == domain 1  score: 47.7 bits;  conditional E-value: 7.3e-17
                    EEEESTGCHHHHTHHHHHHHHHHHHHHC.....TTSEEEEEEEBSCT.CHHHHHHHHHTTCEEEEECCHECSSSTTSSEEEEEECSTEEEEEEEEE CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos   2 twNvngqaspalgssrrsdrladlltay.....daDvlgLQEvddde.lsriplllalggflgasstsptgggggggnggavlsrfpltslfrrtf 91 
                    t N++g  +++++  +r+ rl ++ ++       + ++gLQE +  e +++i  +   +++l++      ++ g  g+g+a+lsr+p+ +     +
     KHJ35331.1  12 TLNCWGL-KYIAK--YRNQRLSEIGRRIaiaepVPHIVGLQECWTHEdYQNIRKNT--KHVLPYGKF---YHSGIFGGGLAILSRWPIVESSMFRY 99 
                    899***9.99999..99999999999997776666*******77544044444444..666666655...678999************77766666 PP

                    EETSSSSGCEEEEEEEEEEEEEEE........................CCCHHGHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-SSSTSGGGBS CS
                    xxxxxxxxxxxxxxxxxxxxxxxx........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  92 iefndlvaalrreplaakleqlni........................ashrdhdlvrdlqllalllqvealnadrgapvivaGDfNarpsdddsr 163
                    + ++++ a  r  + ++k++                            +++ d +l +++ ++++  ++ ++ a+rg+ v+ +GDfN +p + + r
     KHJ35331.1 100 PLNGRPTAFFRGDWYVGKGVACASiqygensskdiievfnthmhapyeREPNDSYLCHRTAQAWEISKLFRGAAERGHLVVGLGDFNMVPQSLGHR 195
                    666666666666666666666666************************************************************************ PP

                    CGHHHHHHCTTTH..............H................SSCESCETTTTTTTTTTTEB-B......................EEEEEEC CS
                    xxxxxxxxxxxxx..............x................xxxxxxxxxxxxxxxxxxxxxx......................xxxxxxx RF
  Exo_endo_phos 164 vlrtrglalapap..............v................glyllgggptptyvtraggsrl......................Drilasp 206
                    +++t+    + ++                               +   ++ ++ +t++    ++ l                      D+i+ s+
     KHJ35331.1 196 LITTHSPVKDAWLslypnssigaaddpQekarqmpmpsadynikENGITCDSILNTWRWTKDQQKLlgpdkpgisisldkmdskakrlDYIFISS 290
                    *************8877776666555505555666666666677444444444444444444444457777777777777777777779998886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (488 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.56u 0.25s 00:00:00.81 Elapsed: 00:00:00.42
# Mc/sec: 3525.61
//
Query:       KHJ35332.1  [L=783]
Description: putative mitochondrial intermediate peptidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   5.5e-128  428.1   0.0     1e-127  427.2   0.0    1.4  2  Peptidase_M3    Peptidase family M3
  ------ inclusion threshold ------
      0.025   14.2   0.0      0.046   13.4   0.0    1.3  1  Peptidase_M50B  Peptidase M50B-like
       0.11   12.4   0.7        2.9    7.7   0.1    2.4  2  Acid_PPase      Acid Phosphatase
       0.26   11.8   1.5        0.8   10.2   1.5    1.8  1  Caprin-1_dimer  Caprin-1 dimerization domain
       0.32   11.7   1.8         20    6.0   1.8    2.7  1  RAWUL           RAWUL domain RING finger- and  WD40-associate


Domain annotation for each model (and alignments):
>> Peptidase_M3  Peptidase family M3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       1.2   4.4e+03      42      68 ..      85     107 ..      72     135 .. 0.66
   2 !  427.2   0.0  2.8e-131    1e-127       2     457 ..     287     770 ..     286     771 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 1.2
                   HHHHHHHTT-SSHHHHHHTTSTT-SHH CS
  Peptidase_M3  42 raelAkllgyesyaelaledkmaknpe 68 
                   ++ l+k+ g+e++a  +le+  a+   
    KHJ35332.1  85 NRYLTKIEGFEEFARVSLEK--AQ--R 107
                   44779999999999999998..32..2 PP

  == domain 2  score: 427.2 bits;  conditional E-value: 2.8e-131
                   HHC-S-HHHHHHHHHHHCTTTCCSS..THHHHHHHHHHHHHHHHHHHTT-SSHHHHHHTTSTT-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Peptidase_M3   2 lkespdrelRkeayeashskaaeqrntlensklleellklraelAkllgyesyaelaledkmaknpetvldfleelvkklrpllekelkllkelkkk 98 
                   lk+ +d+e+R  ++ as +++       ++ + l +llklr elAkl ++++ya+++ledkmak+pe v  fl++l+kk+++l+  el++l ++kk 
    KHJ35332.1 287 LKNVQDEETRMMIFLASRTSCP------KTIEKLHKLLKLRVELAKLTNFKTYAHMTLEDKMAKSPEMVIAFLKSLSKKNKSLVVSELAQLLKVKKL 377
                   7899****************99......457999***********************************************************9999 PP

                   CCT-S.SS--CCCHHHHHHHHHCCCCS..--CCCCGGG-BHHHHHHCHHHHHHHHHTEEEEEETTS..--SSTT-EEEEEEET.TT-EEEEEEEEEE CS
  Peptidase_M3  99 elgle.gelqpwDvaYYsekqreekyd..ldqeelkeyfpletvleGllelfeeLfGikfveekdakgevwhedVrkleVvdeilsegligeiylDl 192
                   + + +  +lqpwD ++Y  + + +  +    +  l+ +f+l++v++Gl++lf++LfGi++v+ ++  ge wh+dVr+l+V++e  +eg+++ +y+Dl
    KHJ35332.1 378 VINKNdVSLQPWDKDFYIYRIQSTIRTkfKRADFLSSFFSLGRVMQGLSRLFHRLFGIRLVPCETLPGEIWHPDVRRLNVISE--TEGHVAVLYCDL 472
                   9666669**********999887766566566689************************************************..99999******* PP

                   C--TTS-SS-EEEEEE--B...T...............................TS-B--EEEEEEEEE---BTTS--B--HHHHHHHHHHHHHHHH CS
  Peptidase_M3 193 yerkgKrggAasfglvksr...e...............................dgtrqlpviylllNftkpsskkPsLLtldevetLfHEfGHsmH 255
                   ++r gK ++ a+f+l++sr   +                               +g +qlp i+l+++f + + ++PsLL+++e++tLfHE+GH++H
    KHJ35332.1 473 FSRSGKSSNPAHFTLRCSRlirDteieeaiasrnplfespiievndgmsssvtpSGLMQLPTIALICDFPQNTTSQPSLLSFSELTTLFHEMGHAIH 569
                   ******************98761567788999999*******************99***************************************** PP

                   HHC--BSSGGGSTT-S-CCCCCHHHHHHHHGGGSHHHHHCC-B-TTT--B--HHHHHHHHCCCCTTHHHHHHHHHHHHHHHHHCTT-TCCGHH.... CS
  Peptidase_M3 256 sllsrteysnvsgtnvpidfvElpSqlmEnlltepevlkslskhyetgeaipeelleklikaknvnaalellrqlvfaafdqelHeeaeeeqilkkd 352
                   s+l+rt ++nvsgt++++df+ElpS lmE+++++p v++++++hyetg+++   ++ + + ++ + +++e+  q+++a +dq +H+e  ++   ++d
    KHJ35332.1 570 SILGRTIFQNVSGTRCATDFAELPSVLMEHFVMDPHVIELFAEHYETGAKLDYAMIKEKLLVNSQFEGYETEIQIILALLDQAYHSELPLDS--NFD 664
                   ********************************************************99999*****************************99..699 PP

                   HHHHHHHHHHCTTSCTTBT.TSSGGGC-CCCHTSS-TTTTCHHHHHHHHHHHHHHCCHHCCTT-..CCHHHHHHHHTTTTTTSS-HHHHHHCCCSS- CS
  Peptidase_M3 353 lletyaelrkkflglpvap.deasqasFghlfahgYaanYYsylyaevlaldifekffeedpln..retGeryrkeiLsrGgskdplellkkflgre 446
                   ++++y +++k++  lp++p ++++q  Fghlf  gY+++YYsyl+++vla +i++++fe++  +  r  Gery +e+L++Gg +dp+++l+++l++e
    KHJ35332.1 665 SSKVYLNIQKEYGVLPSDPeGTSWQGFFGHLF--GYGSMYYSYLFDKVLAKKIWSTVFENGKASisRSHGERYQREVLKWGGARDPWKCLSNVLEDE 759
                   **************999994679*********..*************************9977788******************************* PP

                   --SHHHHHHCT CS
  Peptidase_M3 447 psadallkalg 457
                   + + + +ka+g
    KHJ35332.1 760 RLEHGGEKAMG 770
                   *********98 PP

>> Peptidase_M50B  Peptidase M50B-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   1.3e-05     0.046      14      38 ..     548     572 ..     535     578 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.3e-05
  Peptidase_M50B  14 kpllrpfkllvvffHElGHalaalL 38 
                     +p l  f  l+++fHE+GHa+  +L
      KHJ35332.1 548 QPSLLSFSELTTLFHEMGHAIHSIL 572
                     566777999***********98877 PP

>> Acid_PPase  Acid Phosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.5   0.0     0.032   1.2e+02      28      74 ..     146     196 ..     123     224 .. 0.75
   2 ?    7.7   0.1   0.00082       2.9      51      91 ..     284     326 ..     277     361 .. 0.75

  Alignments for each domain:
  == domain 1  score: 2.5 bits;  conditional E-value: 0.032
                 EE-TTS.-EEETT--EE---TTHHHHHHHHHH....TT--EEEEE--S-HH CS
  Acid_PPase  28 kkeskksevvDrrgeelklypdveeileelks....kevklavaSrtdepd 74 
                 ++++ + +v+D++++ ++++ +  ++l++        ++ + +aS+++  d
  KHJ35332.1 146 RSTHPDPKVQDAASKAFAIMYEYMNVLNTTTGlarqLDIAIKFASKSKIWD 196
                 44555559********************66655655899999999987655 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.00082
                 HHHHHHHHH..TT--EEEEE--S-HHHHHHHHHHTT-G..... CS
  Acid_PPase  51 eeileelks..kevklavaSrtdepdlarelLklleindakek 91 
                 +++l+++++    + + +aSrt+ p+  ++l kll+++ + +k
  KHJ35332.1 284 STALKNVQDeeTRMMIFLASRTSCPKTIEKLHKLLKLRVELAK 326
                 567777777456678899******************9933333 PP

>> Caprin-1_dimer  Caprin-1 dimerization domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   1.5   0.00022       0.8      24     106 ..     286     372 ..     281     380 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00022
  Caprin-1_dimer  24 vLsslgeeevredflnGtngavklteedLklLd....elyklvepkrdedtslaeqvqkaaehllallegkekevvgttykelkell 106
                      L+++++ee r  +   +  ++  t e+L++L     el+kl++ k+ ++++l+++++k+ e+++a l+   k+  + + +el +ll
      KHJ35332.1 286 ALKNVQDEETRMMIFLASRTSCPKTIEKLHKLLklrvELAKLTNFKTYAHMTLEDKMAKSPEMVIAFLKSLSKKNKSLVVSELAQLL 372
                     689999999999999999999999****99997122245778888888*****************9998877777777777776666 PP

>> RAWUL  RAWUL domain RING finger- and  WD40-associated ubiquitin-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.0   1.8    0.0055        20       5      42 ..     305     402 ..     303     423 .. 0.64

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0055
                 EETTSBHHHHHHHHHHHHHHHHHCH............................................................GGGEEEEEEE..T CS
       RAWUL   5 ctanatVdhLsKyLalrlaleekqe............................................................ekqytiyiveily 42 
                 ++   t++ L+K+L lr++l + ++                                                            +k++ iy+++ + 
  KHJ35332.1 305 TSCPKTIEKLHKLLKLRVELAKLTNfktyahmtledkmakspemviaflkslskknkslvvselaqllkvkklvinkndvslqpwDKDFYIYRIQSTI 402
                 66677899999999999999998776666666666666665555555555555555555555555555555555555555555556666666666555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (783 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       720  (0.0401584); expected 358.6 (0.02)
Passed bias filter:                      552  (0.0307881); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.66u 0.28s 00:00:00.94 Elapsed: 00:00:00.43
# Mc/sec: 5514.55
//
Query:       KHJ35333.1  [L=179]
Description: putative dnl zinc finger domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.6e-27   95.2   0.6    2.4e-27   94.6   0.6    1.3  1  zf-DNL           DNL zinc finger
     0.0035   17.0   0.3     0.0065   16.2   0.3    1.4  1  zf-CSL           CSL zinc finger
  ------ inclusion threshold ------
      0.038   14.0   0.1      0.051   13.6   0.1    1.3  1  HypA             Hydrogenase/urease nickel incorporation, met
      0.055   13.4   0.0       0.11   12.4   0.0    1.5  1  DUF3797          Domain of unknown function (DUF3797)
      0.094   12.8   0.4       0.19   11.8   0.4    1.5  1  Elf1             Transcription elongation factor Elf1 like
        0.2   12.1   1.4        9.8    6.6   0.1    2.2  2  Lar_restr_allev  Restriction alleviation protein Lar
        0.2   11.6   2.0       0.45   10.5   0.1    2.1  2  zinc_ribbon_4    zinc-ribbon domain
       0.24   10.9   1.4          3    7.4   0.1    2.3  2  TF_Zn_Ribbon     TFIIB zinc-binding
        1.7    8.7   6.0        5.1    7.2   0.7    2.3  2  Zn_Tnp_IS1595    Transposase zinc-ribbon domain


Domain annotation for each model (and alignments):
>> zf-DNL  DNL zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.6   0.6   1.2e-30   2.4e-27       2      63 ..      91     152 ..      90     153 .. 0.97

  Alignments for each domain:
  == domain 1  score: 94.6 bits;  conditional E-value: 1.2e-30
      zf-DNL   2 ltftCkaCetrsskeiskkaYekGvVivqCpgCknrHliaDnLgwfedkkktiedilkekge 63 
                 ltftC+ C+ rs+++isk++Y++G V+v+Cp+CknrH+i+D+L++f dk ++ied+l+e+g+
  KHJ35333.1  91 LTFTCQPCGARSTHRISKQGYHHGSVLVSCPNCKNRHVISDQLKIFGDKITNIEDLLREQGH 152
                 89*********************************************************995 PP

>> zf-CSL  CSL zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.3   3.2e-06    0.0065      12      50 ..      86     123 ..      79     124 .. 0.90

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 3.2e-06
                 TTTTEEEEEE.TTSSE..EEEEHHHHHTT....--EEEETTS CS
      zf-CSL  12 eeeesyyypC.RCgde..FelteedleegaegaevvvqCssC 50 
                  +e +++ +C +Cg +    ++++  ++g    +v+v C+ C
  KHJ35333.1  86 RDEYELTFTCqPCGARstHRISKQGYHHG----SVLVSCPNC 123
                 46678999********************9....********* PP

>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   0.1   2.6e-05     0.051      65      97 ..      87     128 ..      39     141 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 2.6e-05
                 EEE--EEEETTTS-EEECHHHHH.........S-TTTSSS-E CS
        HypA  65 eevpvkvrCreCgkefeleekal.........rCpkCgsadv 97 
                 +e +++++C+ Cg++ +++ ++          +Cp+C++++v
  KHJ35333.1  87 DEYELTFTCQPCGARSTHRISKQgyhhgsvlvSCPNCKNRHV 128
                 577899*******9999654322457899999******9876 PP

>> DUF3797  Domain of unknown function (DUF3797)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   5.4e-05      0.11      14      29 ..     118     133 ..     103     145 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.4e-05
     DUF3797  14 vqCPeCgNnkvlNseg 29 
                 v CP+C+N +v   + 
  KHJ35333.1 118 VSCPNCKNRHVISDQL 133
                 89*******9976655 PP

>> Elf1  Transcription elongation factor Elf1 like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.4   9.6e-05      0.19      11      55 ..      82     127 ..      72     135 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 9.6e-05
        Elf1  11 kkkkkkklptkFdCpfCnheksvevkldkkek.iaevsCkvCgesf 55 
                 ++  +++++ +F+C  C++ ++ +++ +  ++    vsC +C+ + 
  KHJ35333.1  82 IETPRDEYELTFTCQPCGARSTHRISKQGYHHgSVLVSCPNCKNRH 127
                 4555666899**********99888766544448899*****9865 PP

>> Lar_restr_allev  Restriction alleviation protein Lar
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.6   0.1    0.0049       9.8      27      43 ..      84     108 ..      55     115 .. 0.68
   2 ?    3.8   0.1     0.037        73       3      17 ..     117     131 ..     115     138 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.0049
  Lar_restr_allev  27 q.......cvyCadCga.stpwfki 43 
                      +       +++C+ Cga st+ ++ 
       KHJ35333.1  84 TprdeyelTFTCQPCGArSTHRISK 108
                      144444559***99***65555444 PP

  == domain 2  score: 3.8 bits;  conditional E-value: 0.037
  Lar_restr_allev   3 LkpCPfCggravler 17 
                      L  CP C++r v+  
       KHJ35333.1 117 LVSCPNCKNRHVISD 131
                      678****99998865 PP

>> zinc_ribbon_4  zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.3      0.42   8.4e+02       3      11 ..      93     101 ..      92     103 .. 0.75
   2 ?   10.5   0.1   0.00022      0.45       3      17 ..     118     132 ..     117     141 .. 0.87

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.42
  zinc_ribbon_4   3 itCpsCkak 11 
                    +tC+ C+a+
     KHJ35333.1  93 FTCQPCGAR 101
                    578888875 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00022
  zinc_ribbon_4   3 itCpsCkakyeidde 17 
                    ++Cp+Ck ++ i+d 
     KHJ35333.1 118 VSCPNCKNRHVISDQ 132
                    89**********995 PP

>> TF_Zn_Ribbon  TFIIB zinc-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.4   0.1     0.058   1.1e+02      14      27 ..      87     100 ..      78     104 .. 0.82
   2 ?    7.4   0.1    0.0015         3       3      14 ..     120     131 ..     118     134 .. 0.84

  Alignments for each domain:
  == domain 1  score: 2.4 bits;  conditional E-value: 0.058
                   ETSTTCEEESSSSB CS
  TF_Zn_Ribbon  14 DpergelvCtdCGl 27 
                   D+ + +++C  CG+
    KHJ35333.1  87 DEYELTFTCQPCGA 100
                   66667899****95 PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.0015
                   ETTTTCEECHEE CS
  TF_Zn_Ribbon   3 CPnCgstnlveD 14 
                   CPnC++++++ D
    KHJ35333.1 120 CPNCKNRHVISD 131
                   ******997766 PP

>> Zn_Tnp_IS1595  Transposase zinc-ribbon domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.0   0.7     0.025        51      19      36 ..      93     110 ..      86     115 .. 0.84
   2 ?    7.2   0.7    0.0025       5.1      19      30 ..     118     129 ..     110     132 .. 0.80

  Alignments for each domain:
  == domain 1  score: 4.0 bits;  conditional E-value: 0.025
  Zn_Tnp_IS1595  19 fvCPhCgsrkayriktrg 36 
                    f+C  Cg r+ +ri++ g
     KHJ35333.1  93 FTCQPCGARSTHRISKQG 110
                    89*******999999855 PP

  == domain 2  score: 7.2 bits;  conditional E-value: 0.0025
  Zn_Tnp_IS1595  19 fvCPhCgsrkay 30 
                    + CP+C++r+++
     KHJ35333.1 118 VSCPNCKNRHVI 129
                    45*******976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (179 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       603  (0.0336327); expected 358.6 (0.02)
Passed bias filter:                      470  (0.0262145); expected 358.6 (0.02)
Passed Vit filter:                        59  (0.00329076); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1319.05
//
Query:       KHJ35334.1  [L=699]
Description: putative uv-damage endonuclease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   5.5e-111  370.2   0.0   7.5e-111  369.8   0.0    1.2  1  UvdE          UV-endonuclease UvdE
  ------ inclusion threshold ------
       0.03   13.7   0.0      0.057   12.8   0.0    1.4  1  AP_endonuc_2  Xylose isomerase-like TIM barrel


Domain annotation for each model (and alignments):
>> UvdE  UV-endonuclease UvdE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  369.8   0.0  8.3e-115  7.5e-111       1     275 [.     181     487 ..     181     488 .. 0.99

  Alignments for each domain:
  == domain 1  score: 369.8 bits;  conditional E-value: 8.3e-115
        UvdE   1 lGyvclavelrnaspavtlsrtrrlklikrer............................keklkelakaNlkdllkllkynaaygirllRlSSslvPl 71 
                 lGy+cl+++lr   p+++ sr++r+++i ++r                            ++ ++ l  aN++d+ k+l++n++ygi+++RlSS+++P+
  KHJ35334.1 181 LGYACLNTYLRYSYPSIFASRACRISSIIEHRhpltkpneakhatrnrpdksktptvesgQRYVEALCLANVHDVPKMLRWNHKYGIKFMRLSSEMFPF 279
                 8************************************************************************************************** PP

        UvdE  72 ashpevgykletalaeeleevGelakelglRltfHPeqftllnSdrkevtesairdlayHdklldalklaeqq..davliiHvGGkfgdkeaalerfke 168
                 ash+e+gykl+++++e l+evG++  elg+R+++HP+qft+l+S+r+ev  sairdl+yHd+ll++lkl++qq  dav+i+H+GG+fgdk+a++erf+e
  KHJ35334.1 280 ASHAEYGYKLAPFASEALAEVGRVTVELGHRVSTHPGQFTQLGSPREEVIASAIRDLEYHDELLSLLKLPRQQnaDAVMILHMGGTFGDKAATIERFRE 378
                 ************************************************************************999************************ PP

        UvdE 169 nikrlpdsvkerlvLENDdksytvadlLpvceelniPlVlDyHHhnvld....lreesldeslplveriveTWerkgikqkvHlSepldgkavrahkdr 263
                 n+k+l++s+k+rlvLENDd+s++v+dlLp+ce+lniPl lD+HHhn+++    lre++ld++  l +ri +TW+rk+i+qk+H+Sep+ + av+++++r
  KHJ35334.1 379 NYKNLSESIKQRLVLENDDVSWSVHDLLPICEDLNIPLCLDFHHHNINFssnhLREGTLDIVS-LFPRIKATWTRKSIRQKMHYSEPCAD-AVTPRQRR 475
                 ************************************************999999*******99.8************************9.******** PP

        UvdE 264 khadrvldllea 275
                 kh+ r  +l+++
  KHJ35334.1 476 KHNARPNTLPPC 487
                 ******999998 PP

>> AP_endonuc_2  Xylose isomerase-like TIM barrel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   6.4e-06     0.057      29     169 ..     296     433 ..     276     448 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 6.4e-06
                   HHHHHHHHHHHTTSEEEEEEECCCHSTCTHCHTTCSHHHHHHHHHHHHHHHHHH..........TBSE.EEEEBCCGBCTTTSGHHHHHHHHHHHHH CS
  AP_endonuc_2  29 elrelrkaldelglriaslslftrfgypdederearreesvdalkraielaaaL..........Gapl.lvlhpGtagagpkgseeeawerlaesln 114
                   +l+e+ +   elg r++ + ++    +++   re++    ++ + r +e+  +L          +a+  ++lh G    g  g++++++er++e+ +
    KHJ35334.1 296 ALAEVGRVTVELGHRVSTHPGQFTQLGSP---REEV----IASAIRDLEYHDELlsllklprqqNADAvMILHMG----GTFGDKAATIERFRENYK 381
                   55555555556666633332222222222...2333....55555555555555555566666655546888988....8899************** PP

                   HHHHHHHHHTSEEEEE--TTTTSSSTCHHHHHHHHHHTTTTEEEEEEHHHHHHH......T CS
  AP_endonuc_2 115 eladyaekegvklalEtlagsgvelgdeelarlldavdspnvgvclDtgHllia......e 169
                    l +  +    +l+lE+ + s +     +l+ ++++++   +++clD+ H +i+      +
    KHJ35334.1 382 NLSESIK---QRLVLENDDVSWS--V-HDLLPICEDLN---IPLCLDFHHHNINfssnhlR 433
                   *****76...99*****999984..5.8999***9999...**********9986655442 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (699 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       659  (0.0367561); expected 358.6 (0.02)
Passed bias filter:                      305  (0.0170115); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.45
# Mc/sec: 4671.15
//
Query:       KHJ35335.1  [L=159]
Description: hypothetical protein EV44_g0828 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-18   66.2   0.7    1.7e-18   66.2   0.7    1.9  2  COX14           Cytochrome oxidase c assembly
    0.00021   20.9   0.1    0.00028   20.5   0.1    1.2  1  NnrU            NnrU protein
  ------ inclusion threshold ------
      0.052   13.8   0.3      0.088   13.1   0.3    1.5  1  DUF4129         Domain of unknown function (DUF4129)
       0.37   11.5   5.2        3.8    8.2   2.0    2.1  2  Cytochrom_B562  Cytochrome b562


Domain annotation for each model (and alignments):
>> COX14  Cytochrome oxidase c assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.9      0.68   3.1e+03      42      57 ..      44      57 ..      43      59 .. 0.57
   2 !   66.2   0.7   3.9e-22   1.7e-18       1      58 [.      65     122 ..      65     123 .. 0.95

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.68
       COX14 42 ynrkqkaeliereklk 57
                ++r+ +a  ++++++k
  KHJ35335.1 44 KVRRLRA--AADKARK 57
                4677777..5555554 PP

  == domain 2  score: 66.2 bits;  conditional E-value: 3.9e-22
       COX14   1 akyargrrlaDkaHrltVltLiGvTlyaggllvytvysygkynrkqkaeliereklke 58 
                 +++argr +aD+aH++t +tLi+++++aggl++y v +++ ynr++kae+ +++k+++
  KHJ35335.1  65 RWIARGRIWADVAHTITTTTLIAASVIAGGLTAYAVTDMIIYNRRKKAEYFQEQKAQQ 122
                 6899********************************************9999999876 PP

>> NnrU  NnrU protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.1   6.3e-08   0.00028     121     170 ..      72     123 ..      67     148 .. 0.75

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 6.3e-08
        NnrU 121 iWA.laHllanGdl.asvllfgglllwalvgviaidrrkrrrlgeewealaa 170
                 iWA +aH++   +l a+ ++ ggl ++a+ ++i+++rrk++++ +e +a+++
  KHJ35335.1  72 IWAdVAHTITTTTLiAASVIAGGLTAYAVTDMIIYNRRKKAEYFQEQKAQQQ 123
                 99989******998567899******************77777666554333 PP

>> DUF4129  Domain of unknown function (DUF4129)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.3     2e-05     0.088      13      37 ..      32      56 ..      26     101 .. 0.80

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 2e-05
     DUF4129 13 gldrrpgeTprEyarrvriapspaa 37
                 ++ +p+eTp+E +rr+r+a + a+
  KHJ35335.1 32 RIPGPPHETPQEKVRRLRAAADKAR 56
                58899************65555443 PP

>> Cytochrom_B562  Cytochrome b562
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.5   0.1     0.012        54      25      48 ..      41      64 ..      38      78 .. 0.86
   2 ?    8.2   2.0   0.00085       3.8      31      96 ..      84     154 ..      74     158 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.012
  Cytochrom_B562 25 lkkalkelraaaedakeatpskle 48
                     ++++ +lraaa++a++a++s+l+
      KHJ35335.1 41 PQEKVRRLRAAADKARKAQISTLD 64
                    588999************998876 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.00085
  Cytochrom_B562  31 elraaaedakeatpsklek.....dseeqkdYqeGldklidqldkaealakagkleeakaalkelkdlrke 96 
                     +l+aa+  a   t++ +++     ++++ + +qe   + +  +d+a+++++ g  +ea+ ++ ++++ r++
      KHJ35335.1  84 TLIAASVIAGGLTAYAVTDmiiynRRKKAEYFQEQKAQQQLVIDAARKAIQDGTASEAQISIIQMENQRQD 154
                     5566666666666666666666657888888888888888899***********************99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (159 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1254  (0.0699426); expected 358.6 (0.02)
Passed bias filter:                      559  (0.0311785); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.42
# Mc/sec: 1148.30
//
Query:       KHJ35336.1  [L=701]
Description: putative kinesin family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-57  195.5   2.0    1.2e-57  195.3   0.0    2.1  2  Kinesin      Kinesin motor domain
    2.3e-13   50.3   0.1    3.9e-10   39.9   0.0    2.8  3  Microtub_bd  Microtubule binding
     0.0031   17.6   3.5     0.0097   16.1   3.5    1.8  1  Cnn_1N       Centrosomin N-terminal motif 1


Domain annotation for each model (and alignments):
>> Kinesin  Kinesin motor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.3   0.0     2e-61   1.2e-57      23     332 ..      46     462 ..      18     463 .. 0.83
   2 ?   -4.2   1.6      0.99   5.9e+03     194     225 ..     471     502 ..     470     514 .. 0.72

  Alignments for each domain:
  == domain 1  score: 195.3 bits;  conditional E-value: 2e-61
                 TCTCEEEEEEEEECTTSCEEEEESEEEETTS-HHHHHHHH.HHHHHHHHH....TTSEEEEEEEESTTSSHHHHHTBCTTTSBSHHHHHHHHHHHHHHH CS
     Kinesin  23 ekkeeekkskkenkeeeekkfkFdkvfdeeatqeevyeet.akplvesvl....eGynatifaYGqtgsGKTyTmegkeeeeeGiipraleelFesikk 116
                 ++++   +  ++n++++ +kf+F ++f+e+a+q ++++ t + +l+e++l    eG+ +++ + G+tgsGKTyTm g+ ++++G+i+ +l+ lF+si+k
  KHJ35336.1  46 TSTSVVLTPPNDNRRKAVEKFTFTQIFKEDANQLDIFHGTnTLSLIERALgkneEGKDGLLATLGVTGSGKTYTMFGS-RSQRGLIQLILDVLFRSISK 143
                 445556666788999999*******************987456899999977778**********************8.999***************99 PP

                 CTTTH..................................................................................EEEEEEEEEEEE CS
     Kinesin 117 ekeek..................................................................................ekefsvkvsylE 133
                 +   +                                                                                  + ++ + +s++E
  KHJ35336.1 144 NMYLDtvdkslhasvaaadsseaqiisaqnfletiypdltnasragsraqtpisresnfsttprrilpqssmpctpdishvtaqcdpNAQYAILISMYE 242
                 87666999*******************************************************************************9*********** PP

                 EETTEEEETTSTTT......TSTSS..EBEEEECTTSCCEEETTS--EEESSHHHHHHHHHHHHHHHTSTTSSCTSHHCCSEEEEEEEEEEEETTTTTC CS
     Kinesin 134 iYneeiyDLLeskk......skkkk..klkiredskkgevyvkgltevevksaeevlellekgeknrkvaetklneeSSRSHavftitleqknlkeete 224
                 +Yn++i+DLL++        + +++   +k +e+s + + +v+g++++ + + +e+l +l+ g ++r+va t  n+ SSRSH  ++i++++++++  + 
  KHJ35336.1 243 VYNDRIFDLLAPALptkstkEYRRRplLYKHTENSPH-KKVVAGIRKIICVTNKEALMVLDAGLHERQVAVTGSNSVSSRSHGFISIEIKKRKSNWVHG 340
                 ***********99877665422222222233333333.689**************************************************99776555 PP

                 EEEEEEEEEEEEEEECCCHHHHSSTCHHHHHHHHHHHHHHHHHHHHHHHHHHT...CCTSTSCGGGSHHHHHTGG.GH....SSS.........SEEEE CS
     Kinesin 225 ekvkisklnLvDLAGsErasktgaaegerlkEaaniNkSLlaLgrvisaLaek...kkskhipYRdSkLTrlLqd.sL....gGn.........sktlm 306
                  +  +s+l++vDLAGsEra+++++ +g +l Ea++iN+SL+ Lg++++  ++    +k+++ p+R++kLT+lL   ++    +Gn         +k +m
  KHJ35336.1 341 -QWISSSLTIVDLAGSERARDAKT-QGATLVEAGKINESLMYLGQCLQIQSDMassTKQNFAPFRQCKLTELLFAnCFahtnNGNptplfhhnpQKAIM 437
                 .789999************99995.7999******************9988888889**************9853133111112222222222346667 PP

                 EEEE-TBGGGHHHHHHHHHHHHHHCT CS
     Kinesin 307 ivtvspssenleetlstlkfaerake 332
                 iv+ +p   +++ t + l++++ a+e
  KHJ35336.1 438 IVMADPI-GDFNATSQILRYSSLARE 462
                 7777774.567777777777776665 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 0.99
                 STTSSCTSHHCCSEEEEEEEEEEEETTTTTCE CS
     Kinesin 194 vaetklneeSSRSHavftitleqknlkeetee 225
                 v +t+l ++S  SH++ t +  +++l+ +++e
  KHJ35336.1 471 VTSTTLSHSSTDSHTLNTTRTLSSRLNPNESE 502
                 67899999999999999988888777776663 PP

>> Microtub_bd  Microtubule binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.9   0.0   6.4e-14   3.9e-10      43     124 ..      44     144 ..       9     158 .. 0.76
   2 !    7.3   0.0   0.00071       4.2     122     149 .]     226     252 ..     213     252 .. 0.83
   3 ?   -3.5   0.0       1.5   8.7e+03     103     140 ..     478     513 ..     472     522 .. 0.66

  Alignments for each domain:
  == domain 1  score: 39.9 bits;  conditional E-value: 6.4e-14
                  T................TTTEEEE-SEEEECTTHCCCCCCCCHH..HHHHHH....TT--EEEEEEES................ST-HCHHHHHHHHH CS
  Microtub_bd  43 e.............eekkkkkefsFdrvfeseseqeevfeeisq..lvqsal....dgynvcifaygqTGsGKtyTmegeeeeagmipraveeifeti 121
                  e             + +k  ++f+F+++f+++++q ++f+ ++   l++ al    +g++  + ++g TGsGKtyTm g+++++g i+ +++ +f+ i
   KHJ35336.1  44 EgtstsvvltppndNRRKAVEKFTFTQIFKEDANQLDIFHGTNTlsLIERALgkneEGKDGLLATLGVTGSGKTYTMFGSRSQRGLIQLILDVLFRSI 141
                  033334444445567788999******************977652279999974333567789999*******************************9 PP

                  HCC CS
  Microtub_bd 122 sel 124
                  s++
   KHJ35336.1 142 SKN 144
                  997 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.00071
                  HCCTSCCCCEEEEEEEEEEESS-EEETT CS
  Microtub_bd 122 selkekgwkyeielqfveiynekvqDlL 149
                  ++  + +++y+i +++ e+yn+++ DlL
   KHJ35336.1 226 AQC-DPNAQYAILISMYEVYNDRIFDLL 252
                  333.6889*******************8 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 1.5
                  .....ST-HCHHHHHHHHHHCCTSCCCCEEEEEEEEEE CS
  Microtub_bd 103 eeeeagmipraveeifetiselkekgwkyeielqfvei 140
                  ++++++ + ++++++ + ++ +  ++ + ++e+  +ei
   KHJ35336.1 478 HSSTDSHTLNTTRTLSSRLNPN--ESERATMEIAALEI 513
                  4556666667777777777777..55666777777766 PP

>> Cnn_1N  Centrosomin N-terminal motif 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   3.5   1.6e-06    0.0097      12      62 ..     584     643 ..     579     649 .. 0.76

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1.6e-06
      Cnn_1N  12 LkKENFdLKLri.........yfLeerleklseeqkeellkenielkveveslqkelkek 62 
                 Lk E  d KL+i            ee  e++++ ++e+l++en  lk+eve+l++e++ +
  KHJ35336.1 584 LKDEHLDRKLEIytqsiaaisVKDEEDKENTHNGTREDLEAENLRLKIEVEKLKREIQGR 643
                 566666667777555555544444566677777************************965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (701 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       678  (0.0378158); expected 358.6 (0.02)
Passed bias filter:                      325  (0.0181271); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4792.28
//
Query:       KHJ35337.1  [L=282]
Description: hypothetical protein EV44_g1713 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.8e-60  201.4   0.7    7.8e-60  201.4   0.7    2.0  2  DUF2458         Protein of unknown function (DUF2458)
  ------ inclusion threshold ------
      0.034   13.9   5.8       0.62    9.7   0.9    2.3  2  MAP7            MAP7 (E-MAP-115) family
       0.07   13.0   4.0      0.097   12.5   4.0    1.2  1  TMEM51          Transmembrane protein 51
      0.083   13.4   2.5       0.37   11.4   0.2    2.5  2  JHD             Jumonji helical domain
       0.22   11.6   8.5        0.5   10.5   0.2    2.3  2  Mod_r           Modifier of rudimentary (Mod(r)) protein
       0.67   10.2   4.3       0.79   10.0   0.5    2.8  3  Plasmid_RAQPRD  Plasmid protein of unknown function (Plasmid_
        6.1    6.9  12.3        2.1    8.4   8.2    1.9  2  RP-C_C          Replication protein C C-terminal region


Domain annotation for each model (and alignments):
>> DUF2458  Protein of unknown function (DUF2458)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.6      0.17   4.5e+02      51      53 ..      43      45 ..      13      87 .. 0.52
   2 !  201.4   0.7     3e-63   7.8e-60       1     172 []     116     281 ..     116     281 .. 0.96

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.17
     DUF2458 51 ikk 53
                 ++
  KHJ35337.1 43 QNQ 45
                111 PP

  == domain 2  score: 201.4 bits;  conditional E-value: 3e-63
     DUF2458   1 dpstIttwpaalryVmklvaqneelqrkirkliksqheherqWwkgReaLikkqkareekkkkldevlkslggavtekkessteeekeaeLeeyDkkvy 99 
                 dp +I++wpa+lr+++k+va+ne+++ +ir+lik+qhehe+qWw+gR+ Li k karee++kkldevl+++gg v+  +  ++ ++ e+eL+++D kvy
  KHJ35337.1 116 DPTSIIEWPAGLRCITKTVAKNENILDEIRRLIKNQHEHEEQWWNGRNTLIDKLKAREEGQKKLDEVLRAVGGVVSMLQPDNNIKSVERELQTFDLKVY 214
                 89***********************************************************************99998899999*************** PP

     DUF2458 100 kaskeMskaleseLreLgiPfFaikeeLvkeeseekskkkeskesekkkkeiseeeLkelqrrmlelLeDLck 172
                 ka+ +M+++++++Lr+Lg+PfF++++eLv+++ ++++  k++         i+e++L++lqrrmle+LeDLc+
  KHJ35337.1 215 KAQIQMVREMNAKLRSLGVPFFGTRSELVRPAIKKTEIVKDEA------GLIDEADLVKLQRRMLEMLEDLCN 281
                 *****************************99999988855433......46*********************5 PP

>> MAP7  MAP7 (E-MAP-115) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.7   0.3    0.0021       5.4      29      56 ..      27      54 ..       2      87 .. 0.56
   2 ?    9.7   0.9   0.00024      0.62      13      58 ..     131     178 ..     126     229 .. 0.76

  Alignments for each domain:
  == domain 1  score: 6.7 bits;  conditional E-value: 0.0021
        MAP7 29 qaReqkereEqereekeeeerlekeelk 56
                q+ +q   ++q+++++++++r + + ++
  KHJ35337.1 27 QIQNQNQNQNQNQHQNQNQNRGQSQSQQ 54
                4444444444444444444443322222 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00024
        MAP7  13 ttdaeeAsriLaEkrrqaReqkereEqereekeee.er.lekeelkrk 58 
                 t++    + iL E rr++++q e+eEq  + ++   ++ +++ee ++k
  KHJ35337.1 131 TKTVAKNENILDEIRRLIKNQHEHEEQWWNGRNTLiDKlKAREEGQKK 178
                 555566789******************877666543331333444444 PP

>> TMEM51  Transmembrane protein 51
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   4.0   3.8e-05     0.097      95     176 ..      30     112 ..      17     156 .. 0.69

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 3.8e-05
      TMEM51  95 elaraqeslqeeeeeqeeeesaeeaasryavPsYeEvvtsgeypvrqsnlres.tsqLPsyedlvevdeneaeeeaeaeaaas 176
                 +++++q+++q+++++q+  +s+ +++ +  +Ps eE +++++   +++ +++s     P+ e  + v  n+ ++ +++++ ++
  KHJ35337.1  30 NQNQNQNQNQHQNQNQNRGQSQSQQQFKTFAPSVEESLNQSYLKPNENVTSNSqYKPAPALEAFLPVASNNSSTIQKKPTLSK 112
                 2233444444445555555556666777779********99966655555544256678999998888877766666544444 PP

>> JHD  Jumonji helical domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.5   0.1      0.17   4.4e+02      56      84 ..      17      45 ..       7      82 .. 0.69
   2 ?   11.4   0.2   0.00014      0.37      36     101 ..     138     207 ..     124     210 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.5 bits;  conditional E-value: 0.17
         JHD 56 lvkgakalltalkewtkkeavaekeeeip 84
                +++++  l++++++++++++ ++++++  
  KHJ35337.1 17 ILRTLASLTPQIQNQNQNQNQNQHQNQNQ 45
                55666667777777777666666655533 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 0.00014
         JHD  36 krlleklkelneegkraaeylvkgakalltalkewtkkeava....ekeeeipetikpskLikdlskeir 101
                 +++l+++++l +++++ +e+  +g ++l+ +lk+ ++ ++      +    + + ++p++ ik +++e++
  KHJ35337.1 138 ENILDEIRRLIKNQHEHEEQWWNGRNTLIDKLKAREEGQKKLdevlRAVGGVVSMLQPDNNIKSVERELQ 207
                 56*******************************9986554332222455667778888888998888887 PP

>> Mod_r  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   3.5     0.022        56      19      67 ..      19      67 ..      10      91 .. 0.75
   2 ?   10.5   0.2   0.00019       0.5      33     107 ..     135     209 ..     116     229 .. 0.89

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.022
       Mod_r 19 ealvktlpevkqlkeekeellaeneslaeknlslepeleelrselqekl 67
                + l++ +p+++++++++ +   +n++  + + +++++++    +++e+l
  KHJ35337.1 19 RTLASLTPQIQNQNQNQNQNQHQNQNQNRGQSQSQQQFKTFAPSVEESL 67
                4455455999999999999999999988888888887766555555555 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 0.00019
       Mod_r  33 eekeellaeneslaeknlslepeleelrselqekleelkelekefeekeqeldellqkfspdallarLqtavaea 107
                 ++ e++l+e+++l +++ ++e++  + r+ l++kl+  +e +k+++e  +    +++ ++pd++ + ++ +++  
  KHJ35337.1 135 AKNENILDEIRRLIKNQHEHEEQWWNGRNTLIDKLKAREEGQKKLDEVLRAVGGVVSMLQPDNNIKSVERELQTF 209
                 5679999*******************************************9999999999999999888887765 PP

>> Plasmid_RAQPRD  Plasmid protein of unknown function (Plasmid_RAQPRD)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.5   0.00031      0.79       7      36 ..      12      41 ..       9      75 .. 0.90
   2 ?   -1.3   0.0         1   2.7e+03      10      32 ..     135     157 ..     132     165 .. 0.76
   3 ?   -0.2   0.1      0.47   1.2e+03       7      54 ..     177     223 ..     171     226 .. 0.64

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00031
  Plasmid_RAQPRD  7 eeLakllkqLdqlqalveraeaqakqeeka 36
                    ++La++l+ L++l+ ++++ +++++q++++
      KHJ35337.1 12 TDLASILRTLASLTPQIQNQNQNQNQNQHQ 41
                    68***********************99665 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1
  Plasmid_RAQPRD  10 akllkqLdqlqalveraeaqakq 32 
                     ak  + Ld++ +l+++  ++++q
      KHJ35337.1 135 AKNENILDEIRRLIKNQHEHEEQ 157
                     55566799999999998888776 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.47
  Plasmid_RAQPRD   7 eeLakllkqLdqlqalveraeaqakqeekaRvhfdYdrlrrDlerira 54 
                     ++L ++l+    + ++++  ++ +  e ++   fd +  ++ ++++r+
      KHJ35337.1 177 KKLDEVLRAVGGVVSMLQPDNNIKSVE-RELQTFDLKVYKAQIQMVRE 223
                     555555555555666665555555555.66678888888888888875 PP

>> RP-C_C  Replication protein C C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   8.2   0.00083       2.1      21      92 ..      10      77 ..       7     106 .. 0.60
   2 ?   -1.1   0.1      0.68   1.8e+03      25      53 ..     130     158 ..     115     179 .. 0.76

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00083
      RP-C_C 21 tlaeleelleelealreevenalesalkaenssanesqnerhiqnsnpdsssesepasekereekeaaaasa 92
                 +++l+++l++l++l  +++n+   +++++n++ n++qn  + q+ ++ +++   p+ e++ ++++ + +++
  KHJ35337.1 10 PTTDLASILRTLASLTPQIQNQN--QNQNQNQHQNQNQNRGQSQSQQQFKTF--APSVEESLNQSYLKPNEN 77
                5789999************9998..555555556666666665555552222..233333333333333322 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.68
      RP-C_C  25 leelleelealreevenalesalkaenss 53 
                 +++ +++ e++ +e++++++++ + e++ 
  KHJ35337.1 130 ITKTVAKNENILDEIRRLIKNQHEHEEQW 158
                 56677777888889999988888777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2578  (0.143789); expected 358.6 (0.02)
Passed bias filter:                      782  (0.0436165); expected 358.6 (0.02)
Passed Vit filter:                        83  (0.00462937); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.38
# Mc/sec: 2230.98
//
Query:       KHJ35338.1  [L=2700]
Description: putative glycosyl group 1 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-11   43.9   0.0    4.1e-11   42.7   0.0    1.6  1  Glycos_transf_1  Glycosyl transferases group 1
    3.3e-10   40.5   0.0    7.6e-10   39.3   0.0    1.6  1  Glyco_trans_1_4  Glycosyl transferases group 1
  ------ inclusion threshold ------
       0.13   13.0   0.0       0.28   11.8   0.0    1.5  1  Nup_retrotrp_bd  Retro-transposon transporting motif


Domain annotation for each model (and alignments):
>> Glycos_transf_1  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.7   0.0   6.9e-15   4.1e-11      13     151 ..    2427    2571 ..    2415    2586 .. 0.90

  Alignments for each domain:
  == domain 1  score: 42.7 bits;  conditional E-value: 6.9e-15
                       TT-EEEEEESS-TTTTTHHHHHHHHHCCCCC.HCSCEEEEEES.....STTHHHHHHHHHHHCTTCGGGEEECCHSSSHHHHHHCESEEEEE CS
  Glycos_transf_1   13 ekkkiilsvgrlekeKgvdllikafallkkq.lnpnvklviaG....ngeeekelkklaeelelsdnviflgevsredleellknadifvlp 99  
                        +k+++++++ + + K++++ i a++ +  q   ++++l ++G    + ++     +l+++  ls+ v++ ge++     ++lk+  +f  +
       KHJ35338.1 2427 AEKPTVIMLSHIWYAKDIKTSILAADIIVNQwGFKDYRLEVYGaidkSPSYSMDCFELIASKSLSKFVTLCGESD---PVTVLKKTWVFMNS 2515
                       6899*************************9999************9999999999******************96...99************ PP

                       ESSBSS-HHHHHHHHTT--EEEETTTTHCHHCHTTTSE....EEE-TT-HHHHHHH CS
  Glycos_transf_1  100 sisEgfGivllEAmaaglpviasnaggpaevvkdgetG....llvkpnnaealaea 151 
                       sisEg++++l EA   g+pv+++++g  + v++d +tG    ++v+pn+a +la+a
       KHJ35338.1 2516 SISEGLPLALGEAALTGVPVVCTDVGASLRVLTDPDTGerysAVVAPNDARSLARA 2571
                       ************************************77444468888899998887 PP

>> Glyco_trans_1_4  Glycosyl transferases group 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.3   0.0   1.3e-13   7.6e-10       2     132 ..    2430    2576 ..    2429    2579 .. 0.75

  Alignments for each domain:
  == domain 1  score: 39.3 bits;  conditional E-value: 1.3e-13
                       EEEEEES---GG.GTHHHHHHHHHHHH.H...H.EEEEEES---.......HHHHHHHT..T-T.TEEEE---THHHHHHHH-SEEEE--.. CS
  Glyco_trans_1_4    2 pvilfvGrleenvkgvdllleavpllrkk...d.vrlvivGdgp.rp....eeleelaa..gleerveftGfvedlaellaaadvfvaPs.. 80  
                       p++++++ +    k ++  + a+  + ++   + +rl ++G  +  p    + + el+a   l++ v+++G+  d   +l++ +vf + s  
       KHJ35338.1 2430 PTVIMLSHI-WYAKDIKTSILAADIIVNQwgfKdYRLEVYGAIDkSPsysmDCF-ELIAskSLSKFVTLCGES-DPVTVLKKTWVFMNSSis 2518
                       566777777.3447777778888777766655259******6543333443223.35545678777*****99.****************** PP

                       ---SHHHHHHHHTT-EEEE-TGGGTTT--..TTSS....EE--TT-HHHHHHHHHHHH CS
  Glyco_trans_1_4   81 egfglkllEamaaglpvVatdvggiaevv..geng....llvppgdpealaeailrLl 132 
                       eg++l+l Ea+  g+pvV+tdvg+  +v+   ++g     +v+p+d+ +la+a + +l
       KHJ35338.1 2519 EGLPLALGEAALTGVPVVCTDVGASLRVLtdPDTGerysAVVAPNDARSLARAQICIL 2576
                       **********************865666677344444458999********9976655 PP

>> Nup_retrotrp_bd  Retro-transposon transporting motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   4.7e-05      0.28      41      85 ..    2584    2629 ..    2514    2630 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 4.7e-05
  Nup_retrotrp_bd   41 qsanspsaitapalsqtPaifnvGssgsqan.ivsgRkIaqmrrRr 85  
                       q an p++++ p+ls +P   +v +  s++    + Rk   m++R+
       KHJ35338.1 2584 QYANDPNGFSVPSLSDNPTEADVEAITSRMYqKSEERKALGMKSRK 2629
                       899*************************999556689999999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2700 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       872  (0.0486363); expected 358.6 (0.02)
Passed bias filter:                      505  (0.0281667); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 1.25u 0.32s 00:00:01.57 Elapsed: 00:00:00.48
# Mc/sec: 16935.59
//
Query:       KHJ35339.1  [L=460]
Description: hypothetical protein EV44_g3128 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (460 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       699  (0.0389871); expected 358.6 (0.02)
Passed bias filter:                      256  (0.0142785); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 3327.46
//
Query:       KHJ35340.1  [L=218]
Description: hypothetical protein EV44_g0533 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (218 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       312  (0.017402); expected 358.6 (0.02)
Passed bias filter:                      261  (0.0145574); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1580.06
//
Query:       KHJ35341.1  [L=340]
Description: putative succinate fumarate mitochondrial transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.1e-61  202.4   1.9    4.5e-21   74.6   0.0    3.1  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.4   0.3   2.4e-19   4.3e-15       3      95 ..      17     113 ..      15     115 .. 0.90
   2 !   70.6   0.0   4.3e-24   7.8e-20       6      96 ..     122     217 ..     117     218 .. 0.87
   3 !   74.6   0.0   2.5e-25   4.5e-21       4      94 ..     237     327 ..     235     330 .. 0.95

  Alignments for each domain:
  == domain 1  score: 55.4 bits;  conditional E-value: 2.4e-19
                 HHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHCCCSSTTTSCSS.HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   3 lsvlkellaGglagav...atlvttPldvvKtrlqtqkksskksksaa.ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 +s++ +++aGg+a ++   + + +  ld++K+r+q++++s++  ++++ ++ + ++i+k+e  +gly+Gl++ +++++p+ a++f+++e +kr+l +
  KHJ35341.1  17 TSAATNFIAGGTAVCLnytTDFWAIKLDTIKVRMQLSRRSQAPGTQNRgFIATASSIVKQETTLGLYKGLGAVMTGIMPKMAIRFTSFEAYKRWLDN 113
                 678899*******987444688999************999887776667********************************************9966 PP

  == domain 2  score: 70.6 bits;  conditional E-value: 4.3e-24
                 HHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHCCCSSTTTSCSS....HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCTT CS
   Mito_carr   6 lkellaGglagav.atlvttPldvvKtrlqtqkksskksksaa....ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllkk 96 
                  + ++aG++ag++ a+ v+tP++v+K+rlq+q++s ++    +    +++++++++k+eG ++lyrG++ + lr+ +++a++f++y +lk++l+k+
  KHJ35341.1 122 HSIFIAGLAAGVTeAVAVVTPMEVLKIRLQAQNHSMADPLDIPkyrnAAHAFYTVFKDEGPSALYRGVSLTALRQGSNQAVNFTAYTYLKDFLQKR 217
                 5679*********77889*************9999665332224455**********************************************986 PP

  == domain 3  score: 74.6 bits;  conditional E-value: 2.5e-25
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlll 94 
                 +++++ l+G+++ga++ +  +P+d++Ktrlq ++ +  +s +++i  +  +++k eG+r++y+G++p+++rvap +a++f++ye lk+ l 
  KHJ35341.1 237 PAYQTTLIGLVSGALGPFSNAPIDTIKTRLQKSPAELGQSAFRRISLITLEMWKCEGVRSFYKGITPRVMRVAPGQAVTFTVYEALKESLE 327
                 578899*********************************************************************************9886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (340 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       337  (0.0187964); expected 358.6 (0.02)
Passed bias filter:                      304  (0.0169558); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.26s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2470.73
//
Query:       KHJ35342.1  [L=649]
Description: putative trna pseudouridine synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      2e-11   44.3   0.0    4.4e-10   40.0   0.0    2.7  2  PseudoU_synth_1  tRNA pseudouridine synthase
     0.0049   16.5   0.1      0.012   15.2   0.1    1.6  1  Ndc80_HEC        HEC/Ndc80p family
  ------ inclusion threshold ------
      0.012   15.7   3.1      0.033   14.4   3.1    1.7  1  Kinesin_assoc    Kinesin-associated
       0.24   11.7   3.0         11    6.4   0.8    2.9  3  Catalase-rel     Catalase-related immune-responsive
        1.2    9.0   9.6        1.3    8.9   2.2    3.0  3  Activator-TraM   Transcriptional activator TraM


Domain annotation for each model (and alignments):
>> PseudoU_synth_1  tRNA pseudouridine synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.13   4.8e+02      46      65 ..     183     202 ..     105     227 .. 0.76
   2 !   40.0   0.0   1.2e-13   4.4e-10       1     107 [.     443     549 ..     443     550 .. 0.81

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.13
  PseudoU_synth_1  46 vtvkgsgFldhqVRamvgvl 65 
                       ++   +++d++V+a ++v+
       KHJ35342.1 183 SSLVRCARTDKGVHAAGNVI 202
                      55556689*******99998 PP

  == domain 2  score: 40.0 bits;  conditional E-value: 1.2e-13
  PseudoU_synth_1   1 AakelvGthdfgsfckqkqek...kntvrtileaaieevsgeekellvvtvkgsgFldhqVRamvgvlfavgqgklspedvkellnakkrkkia 91 
                      A  e++Gth+f +++ qk+ +    + v + ++ a+e v  ++ e+l ++v+g++F+ hq+R m++++++v +   +  +++e      +++i+
       KHJ35342.1 443 ALNEFLGTHNFYNYTVQKKYNdpsAKRVIKSFDLAVEPVIMNQTEWLSIKVHGQSFMMHQIRKMIAMIALVIRCATPLRIIQESY---GPERIS 533
                      6789**********877777753333344445567778888999999**************************999999988765...566799 PP

  PseudoU_synth_1  92 vetapavglvlfhvrY 107
                      +++ap  gl l++  +
       KHJ35342.1 534 IPKAPGLGLLLERPVF 549
                      9999999999987666 PP

>> Ndc80_HEC  HEC/Ndc80p family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.2   0.1   3.4e-06     0.012      36      75 ..     435     474 ..     398     480 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.2 bits;  conditional E-value: 3.4e-06
   Ndc80_HEC  36 sfqseliqellefLkennfehsisaktlksPsqkdfssif 75 
                 + ++++++ l+efL ++nf + + +k ++ Ps+k +++ f
  KHJ35342.1 435 KRRARIQEALNEFLGTHNFYNYTVQKKYNDPSAKRVIKSF 474
                 238899****************************999877 PP

>> Kinesin_assoc  Kinesin-associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   3.1   9.1e-06     0.033      64     135 ..     322     401 ..     264     407 .. 0.66

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 9.1e-06
  Kinesin_assoc  64 vaglspssslsalss....raesvssleerivfspas....eeaierlketekiiaelnetWeeklrkteairlereall 135
                      g+++sss    ++     ++++ s++ +i   ++s    ee ++ lke + i ++l ++  ek+ +tea+ le eal 
     KHJ35342.1 322 HKGINFSSSNIEAETlntnFSTELDSSHVNIKKMQSSdlnhEEILKTLKEDQNISTQLEDAKVEKFENTEALTLENEALA 401
                    23334443332222211112224455555555555555555999*********************************985 PP

>> Catalase-rel  Catalase-related immune-responsive
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.1   7.5e+03      21      44 ..     332     354 ..     328     360 .. 0.71
   2 ?    3.9   0.0     0.017        63       5      28 ..     420     442 ..     417     451 .. 0.73
   3 ?    6.4   0.8     0.003        11       6      38 ..     575     607 ..     571     612 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.1
                   HHHHHHHHHHHHHHTTSS-HHHHH CS
  Catalase-rel  21 eekerlvnniafelskvedeeiqe 44 
                    e e l +n+++el+     +i++
    KHJ35342.1 332 IEAETLNTNFSTELDSSH-VNIKK 354
                   566788899***996654.55555 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.017
                   --SSHHHHHHHHHS-HHHHHHHHH CS
  Catalase-rel   5 ddhfsQagllyrsmseeekerlvn 28 
                   +d ++ a++lyr  s ++++r+ +
    KHJ35342.1 420 KDAYTKARKLYRISS-KRRARIQE 442
                   699*********644.45566555 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.003
                   -SSHHHHHHHH.HS-HHHHHHHHHHHHHHHTTSS CS
  Catalase-rel   6 dhfsQagllyr.smseeekerlvnniafelskve 38 
                   d f+Q ++ y+  + eee+++ ++ + ++l++ +
    KHJ35342.1 575 DEFKQ-KEIYErIFREEERDHQFSSFFNHLDHYQ 607
                   77777.678866******************9976 PP

>> Activator-TraM  Transcriptional activator TraM
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.1      0.78   2.8e+03      39     103 ..      98     124 ..      89     137 .. 0.58
   2 ?    3.6   0.1     0.015        54      43      98 ..     276     331 ..     266     348 .. 0.80
   3 ?    8.9   2.2   0.00035       1.3      31     117 ..     350     433 ..     345     443 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.78
  Activator-TraM  39 sakaqqelldqfkeeleaiasrWgddakekaervlnaalaaskealvkllqegakeaaevvrkev 103
                     ++ +q++ +d+  e+ e+ +                                      +++++ev
      KHJ35342.1  98 NNSTQRKKIDRGDEDAEKAS--------------------------------------QLIKNEV 124
                     55555555555555555544......................................4444444 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.015
  Activator-TraM  43 qqelldqfkeeleaiasrWgddakekaervlnaalaaskealvkllqegakeaaev 98 
                         l+++ ee e++++ W++        +l+   +  kea+  +++ g + + + 
      KHJ35342.1 276 SEGYLEKYLEEQEDVSTFWENAMEIHIKPILDKLDSNIKEAVLLAVHKGINFSSSN 331
                     45689***************999989999999888888999988888877666555 PP

  == domain 3  score: 8.9 bits;  conditional E-value: 0.00035
  Activator-TraM  31 inerllqdsakaqqelldqfkeeleaiasrWgddakekaervlnaalaaskealvkllqegakeaaevvrkeveaalarlkssirea 117
                     +n + +q s     e+l+  ke+ ++i+++ +d   ek e +   al+   eal+     ++    e++ +ev++a ++++   r +
      KHJ35342.1 350 VNIKKMQSSDLNHEEILKTLKED-QNISTQLEDAKVEKFENT--EALTLENEALAVKTSHFTLTPLELAIREVKDAYTKARKLYRIS 433
                     78899***************998.689*99987666777776..59********************************998877643 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (649 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1547  (0.0862848); expected 358.6 (0.02)
Passed bias filter:                      537  (0.0299515); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.64u 0.27s 00:00:00.91 Elapsed: 00:00:00.43
# Mc/sec: 4532.40
//
Query:       KHJ35343.1  [L=350]
Description: putative actin monomer binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-39  134.3   0.1    1.7e-22   79.5   0.2    2.1  2  Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein
  ------ inclusion threshold ------
       0.17   11.8   0.1        1.5    8.8   0.1    2.2  2  WD40_4       Type of WD40 repeat


Domain annotation for each model (and alignments):
>> Cofilin_ADF  Cofilin/tropomyosin-type actin-binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.0   0.0   3.1e-18   2.8e-14       2     120 ..      12     137 ..      11     138 .. 0.78
   2 !   79.5   0.2   1.9e-26   1.7e-22       6     119 ..     196     318 ..     192     320 .. 0.87

  Alignments for each domain:
  == domain 1  score: 53.0 bits;  conditional E-value: 3.1e-18
                  HHHHHHHCTTT.SSEEEEEEECTTTEEEEEE.....SS-...HHHHHHHHH......HTTT-EEEEEEEEEECCSECCEEEEEEEEE--TTS-HHHHH CS
  Cofilin_ADF   2 keafkelksgkktkyilfkidddkeeivvee.....ege...tyeelreel......peseprYavydveyehddeskrsklvfIswvPdsapikqkm 85 
                  ++afk+l  + + + +l++i +++  ++++      +++   +   l + l      +e+ + Y++++  y+ ++     +++ I++vPd+ap+++km
   KHJ35343.1  12 HSAFKKLLTSPEQRGLLCTIVNES--LKPSTvlepaTSSfdnD---LSTLLephliaNENAALYIILR-RYDISS---MAPFLAITYVPDTAPVRSKM 100
                  679999999999999999999766..44444322333335333...333335556888999*******.677755...9******************* PP

                  HHHHHHHHHHHHCTTSE..EE.EEE-CGGCCSHHHHHH CS
  Cofilin_ADF  86 lyasskdalkkelkgis..ve.ieatdldelteeelke 120
                  lyas++ +l++el g++  +e i+at+ +elt + +k+
   KHJ35343.1 101 LYASTRLTLVREL-GTEkfHEtIFATTRQELTANGFKK 137
                  *************.88866556**********999887 PP

  == domain 2  score: 79.5 bits;  conditional E-value: 1.9e-26
                  HHHCTTT.....SSEEEEEEECTTTEEEEEESS-.HHHHHHHHHHTTT-EEEEEEEEEECCSECCEEEEEEEEE--TTS-HHHHHHHHHHHHHHHH.. CS
  Cofilin_ADF   6 kelksgk....ktkyilfkidddkeeivveeege.tyeelreelpeseprYavydveyehddeskrsklvfIswvPdsapikqkmlyasskdalkk.. 96 
                  ke+ s+     + + i+fki+ ++e+++v+++ +  +++l e++++s pr+ +y++ ++h+d   +s+++fI+++P+s+++k++mlya+s++++++  
   KHJ35343.1 196 KEFESQAnpneNVNLIQFKINVETETLEVDSKTAtPISKLGESISKSTPRFSLYRYVHTHND-VISSPILFIYTCPSSSRPKERMLYATSSRSVRQiv 292
                  5555555566799******************6667999***********************9.9**************9*****************66 PP

                  ..HCTTSEEE..EEE-CGGCCSHHHHH CS
  Cofilin_ADF  97 ..elkgisve..ieatdldelteeelk 119
                       g+s++  ie td+ ++t e++ 
   KHJ35343.1 293 eqV-CGLSITknIEETDPADITVESIH 318
                  642.36665345**********99985 PP

>> WD40_4  Type of WD40 repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.0      0.11   9.8e+02      13      26 ..     115     128 ..     111     133 .. 0.83
   2 ?    8.8   0.1   0.00016       1.5      14      28 ..     315     329 ..     313     333 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.11
      WD40_4  13 keeFqdDlyPdtag 26 
                 +e F++ ++  t+ 
  KHJ35343.1 115 TEKFHETIFATTRQ 128
                 589******99986 PP

  == domain 2  score: 8.8 bits;  conditional E-value: 0.00016
      WD40_4  14 eeFqdDlyPdtagte 28 
                 e+ ++DlyP+t++ +
  KHJ35343.1 315 ESIHADLYPPTPVLT 329
                 5679*******9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (350 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       341  (0.0190195); expected 358.6 (0.02)
Passed bias filter:                      259  (0.0144459); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.25s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2644.24
//
Query:       KHJ35344.1  [L=429]
Description: putative tfiie alpha subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.2e-17   61.0   1.4    1.6e-16   60.0   0.2    2.1  2  TFIIE_alpha   TFIIE alpha subunit
  ------ inclusion threshold ------
      0.011   16.1   1.7      0.011   16.1   1.7    2.2  2  DUF1840       Domain of unknown function (DUF1840)
       0.24   11.3   1.8        1.2    9.1   0.4    2.4  2  PHD           PHD-finger
          4    6.9   7.8       0.21   11.1   2.4    1.6  2  Topoisom_I_N  Eukaryotic DNA topoisomerase I, DNA binding fra


Domain annotation for each model (and alignments):
>> TFIIE_alpha  TFIIE alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.0   0.2   3.6e-20   1.6e-16       2      97 ..       7     106 ..       6     114 .. 0.90
   2 ?   -1.4   0.1      0.46   2.1e+03      50      50 ..     295     295 ..     257     348 .. 0.56

  Alignments for each domain:
  == domain 1  score: 60.0 bits;  conditional E-value: 3.6e-20
                  HHHHHHHHCS-HHHHHHHHHHHCTTSEBHHHHHHHHTS-HHHHHHHHHHHHHCTSEEEEEEEE...TTTE.EEEEEEEEECCCHCCCHHHHHHHHHHH CS
  TFIIE_alpha   2 llkevvrkfygeeavlvldvLlekgevteedlakelkidlnelrklLnrLyearlvkykrrrd...eeks.wykyywrinyeklvdvvkrkleevvkk 95 
                  l++  +r fy+ +++lv+d+L++++ + ++dla +++++l+el kl  rL e+r+  ++ r +   e++    + y++i+y+  +d++k+++  + k+
   KHJ35344.1   7 LVRSCMRSFYDTKHILVVDALIIHSALRDDDLAYLMGMNLKELHKLCGRLNEDRFLAVHTRAEqkgEQTRlLSRTYYYIDYRATIDAIKWRVYLMNKH 104
                  7788899****************************************************9999877555425789*****************999887 PP

                  HH CS
  TFIIE_alpha  96 Le 97 
                  ++
   KHJ35344.1 105 VQ 106
                  65 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.46
                  H CS
  TFIIE_alpha  50 r 50 
                  +
   KHJ35344.1 295 Q 295
                  0 PP

>> DUF1840  Domain of unknown function (DUF1840)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   16.1   1.7   2.4e-06     0.011       3      74 ..     270     346 ..     268     363 .. 0.75
   2 ?   -1.0   0.9      0.51   2.3e+03      56      84 ..     400     425 ..     382     428 .. 0.50

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 2.4e-06
     DUF1840   3 vtF.kskaaadvimfedvakq..llkllgks..lterGaitaedlpaaiakLeaaiaaekaeeaeeeeeeeeeekee 74 
                 v+F +s  +++ i f+++a+   ll+  +k+  ++e+ ai  +++++  ++L+a+ a+e ++e++eeee+++ee+e+
  KHJ35344.1 270 VHFtHSTVTGEQIKFGNQANDslLLQETNKKsiADESTAIDGAEMDEYFSRLKAEQAREVEREKAEEEETDDEEEED 346
                 66646888899999998887633566666668999*********************999999998888877765522 PP

  == domain 2  score: -1.0 bits;  conditional E-value: 0.51
     DUF1840  56 ekaeeaeeeeeeeeeekeeekeeeeeevs 84 
                 e++++++ ++e++    ++e++e ee v+
  KHJ35344.1 400 EERASKKIKTERSM---AQEDNESEEDVE 425
                 23333333333322...334455555554 PP

>> PHD  PHD-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   0.4   0.00027       1.2      38      51 ..     112     125 ..     103     126 .. 0.72
   2 ?    0.6   0.0      0.12   5.4e+02      43      50 ..     141     148 ..     130     150 .. 0.71

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00027
                 SHHSSTBSSTTTHT CS
         PHD  38 ekpegewlCekCke 51 
                 +++ +ew+C++Ck+
  KHJ35344.1 112 QDERKEWFCKRCKS 125
                 344459******97 PP

  == domain 2  score: 0.6 bits;  conditional E-value: 0.12
                 TBSSTTTH CS
         PHD  43 ewlCekCk 50 
                  +lC kC+
  KHJ35344.1 141 GFLCHKCS 148
                 68888886 PP

>> Topoisom_I_N  Eukaryotic DNA topoisomerase I, DNA binding fragment
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   2.4   4.6e-05      0.21      71     132 ..     296     357 ..     248     367 .. 0.81
   2 ?   -4.2   0.3       2.2   9.9e+03      97     112 ..     402     415 ..     386     424 .. 0.46

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 4.6e-05
                   HHHHTT----GGGEE-HHHHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHEEEETTEEE CS
  Topoisom_I_N  71 vlkekekikelekcdFskikeylekekekkkaltkeekkklkeekekleekygyalldgrke 132
                   + ++k++  e +++d  ++ ey+++ k+++ +  + ek ++ e+ +++ee+++ + +d + e
    KHJ35344.1 296 ETNKKSIADESTAIDGAEMDEYFSRLKAEQAREVEREKAEEEETDDEEEEDFEDVPVDNKTE 357
                   3356666788999******************************************9998765 PP

  == domain 2  score: -4.2 bits;  conditional E-value: 2.2
                   HHHHTT-----HHHHH CS
  Topoisom_I_N  97 kekkkaltkeekkklk 112
                   +++kk   k e++ ++
    KHJ35344.1 402 RASKK--IKTERSMAQ 415
                   22222..222222222 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (429 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1229  (0.0685482); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.21s 00:00:00.75 Elapsed: 00:00:00.38
# Mc/sec: 3364.17
//
Query:       KHJ35345.1  [L=182]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.13   12.2   0.0       0.21   11.5   0.0    1.3  1  DUF2621   Protein of unknown function (DUF2621)


Domain annotation for each model (and alignments):
>> DUF2621  Protein of unknown function (DUF2621)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   1.2e-05      0.21      82     123 ..     139     180 ..     131     182 .] 0.90

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 1.2e-05
     DUF2621  82 ekiagkigelaleekakeitedliikGyilatpkrdhkflkk 123
                 e+ia+ +g++ ++ ++++ited++i    +atp  d + + +
  KHJ35345.1 139 EEIAATVGRIDIDLTSSQITEDNMIFENSQATPVEDATAVAS 180
                 78*******************************999877665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      265  (0.0147805); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.27s 00:00:00.66 Elapsed: 00:00:00.40
# Mc/sec: 1352.95
//
Query:       KHJ35346.1  [L=93]
Description: hypothetical protein EV44_g3859 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (93 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       245  (0.013665); expected 358.6 (0.02)
Passed bias filter:                      204  (0.0113782); expected 358.6 (0.02)
Passed Vit filter:                         6  (0.000334653); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.23s 00:00:00.57 Elapsed: 00:00:00.37
# Mc/sec: 744.22
//
Query:       KHJ35347.1  [L=327]
Description: putative zf-parp type zinc finger protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.8e-20   72.5   0.0    3.8e-20   72.5   0.0    3.3  3  zf-PARP   Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finge


Domain annotation for each model (and alignments):
>> zf-PARP  Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.5   0.0   2.1e-24   3.8e-20       1      69 [.       6      85 ..       6     109 .. 0.79
   2 ?   -0.8   0.1      0.16   2.9e+03      62      75 ..     151     164 ..     115     197 .. 0.61
   3 ?   -1.7   1.7      0.32   5.7e+03      61      61 ..     250     250 ..     191     311 .. 0.63

  Alignments for each domain:
  == domain 1  score: 72.5 bits;  conditional E-value: 2.1e-24
                EE-S-S--B-SS..S-...-B--SSSEEEEE-...---.---EEEEHHHHHTSSS--S-GGG............EETTTT CS
     zf-PARP  1 EyAksgrakCkk..Ck...kkIakgelRlgkkveiees.eskrWyHvgCftekqiknkketkeieee.....eeiegfee 69
                E+A+sgra+C++  Ck   +kI+kgelRlg++v+i ++ +s+rW+H+gC+t k ++n ++t + +       ++++g+  
  KHJ35347.1  6 EVASSGRAGCQStdCKkagTKIGKGELRLGTWVDIPDRgGSWRWRHWGCVTGKILQNIRNTLDHNGSgdytwDALDGYYG 85
                89*************99******************9999**********************9877768999955555533 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.16
                 ..EETTTTS-HHHH CS
     zf-PARP  62 eeiegfeeLekedq 75 
                 e  + ++ L +e q
  KHJ35347.1 151 ELKKQLDVLAAERQ 164
                 22233333444444 PP

  == domain 3  score: -1.7 bits;  conditional E-value: 0.32
                 . CS
     zf-PARP  61 e 61 
                  
  KHJ35347.1 250 M 250
                 0 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2108  (0.117575); expected 358.6 (0.02)
Passed bias filter:                      560  (0.0312343); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 2436.12
//
Query:       KHJ35348.1  [L=2461]
Description: putative protein kinase rad3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-55  189.3   0.0    3.4e-55  187.6   0.0    2.0  2  PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
    1.4e-41  142.8   6.7    1.4e-41  142.8   6.7    2.0  3  FAT             FAT domain
    4.8e-34  116.3   2.1    2.2e-33  114.2   2.1    2.3  1  UME             UME (NUC010) domain
    7.5e-14   51.3   0.0    1.7e-13   50.1   0.0    1.6  1  FATC            FATC domain
  ------ inclusion threshold ------
        3.8    7.5   7.0         39    4.3   0.2    4.7  5  MA3             MA3 domain


Domain annotation for each model (and alignments):
>> PI3_PI4_kinase  Phosphatidylinositol 3- and 4-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       1.3   4.8e+03     109     158 ..    1101    1147 ..    1033    1147 .. 0.62
   2 !  187.6   0.0   9.5e-59   3.4e-55       2     248 ..    2147    2389 ..    2146    2391 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 1.3
                      HHTSSTTHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHT-TT-- CS
  PI3_PI4_kinase  109 talkpksgllqeFvkkspsaeewlearkqFvrslaklsvldyilgngDRh 158 
                      ++lk +  l q+F+++s   e+ + +++  vrs+   +v    ++n DRh
      KHJ35348.1 1101 IELKSYLRLNQSFIQSSAVSEQPDTFISDLVRSILDTCVK---FNNSDRH 1147
                      4455556666777777777677666666666666555542...5555555 PP

  == domain 2  score: 187.6 bits;  conditional E-value: 9.5e-59
                      EEEEEECSSCHHHHHHHHHHHHHHHHHHHHTTTTCCCT-------EEESSSSEEEEE--TTEEEHHHHHHHHHHHCTTSTCHH.HHHHHHHCH CS
  PI3_PI4_kinase    2 sagiykvgddlrqdelivqvfklmdeelskennpkrrklalktysviplgrkcgiielvassetaaslldeklekkgvpptas.veslrvald 93  
                      +++++k +ddlr+d++ +++ ++++  l+++ +  rr+l +kty+v pl ++cgiie+v+  +t + +l + ++++g+ p+++ +es    l+
      KHJ35348.1 2147 YGLMCKPKDDLRKDQRLMEFNGMINRSLKRDAESSRRQLYIKTYAVTPLNEECGIIEWVDGLKTSRDILLHLYKARGISPNYKeIES----LC 2235
                      899************************************************************************999999853777....99 PP

                      CHCCHHHHHCC.HHHHHHTSSTTHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHT-TT--TTTEEEETTTSEEEESSTTTCCTCSHC CS
  PI3_PI4_kinase   94 kkklkkekklk.fekrtalkpksgllqeFvkkspsaeewlearkqFvrslaklsvldyilgngDRhldNilvdktsgklihIDfGlilpdewk 185 
                      ++ +k  +k+  f+++ +  ++ +++q+Fv+++p++  w+ ar +++rs+a++s+++ ilg+gDRh +Nil ++ +g ++h+Df+ +l +++ 
      KHJ35348.1 2236 EEACKSGGKISfFTEKVLGAFPPVMYQWFVSQFPEPSSWFTARLRYTRSCAVMSMVGTILGLGDRHGENILFEEGNGGIFHVDFN-CLFEKGL 2327
                      99999999999999999999****************************************************************5.5558999 PP

                      SSSS-.SSSSSS-THHHHHHTSTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCCSS CS
  PI3_PI4_kinase  186 llpfpqekvPfrltrelvlaidpskdeglfresceealealrrdqnlltrllkkavkdglilw 248 
                      ++  p e+vPfrlt+++v+a++  + eg fr+s e +l++lr++++ l+++l+++++d+  ++
      KHJ35348.1 2328 TFAKP-ERVPFRLTHNMVDAMGVYGYEGPFRKSSELTLKLLRQHEETLMTILEAFIYDPTLDL 2389
                      9998*.****************************************************98775 PP

>> FAT  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.1   0.1         2     7e+03     202     249 ..      48      92 ..      31      94 .. 0.59
   2 ?   -2.9   0.2      0.86   3.1e+03     168     210 ..     994    1037 ..     950    1071 .. 0.54
   3 !  142.8   6.7     4e-45   1.4e-41       2     346 .]    1573    1907 ..    1572    1907 .. 0.91

  Alignments for each domain:
  == domain 1  score: -4.1 bits;  conditional E-value: 2
                 HHHHHSSCCHHHHCCTSSCCCSS-SS---............HHHHCCC CS
         FAT 202 eqkealqkLreftsellekkeelqsgleaqkeptnleeftkllarcyl 249
                   ++ lqkL  ++s + ++ +++    +   + +++ ++t  l+r+ l
  KHJ35348.1  48 AESNELQKLTTEVSDYENSSSKIDDPET---QIRHIHKLTYVLSRAVL 92 
                 3456677777777777666543333333...34777777776666665 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.86
                  HHCCCCCHCTT.....TT.TSSCCCHHHHHHHCCH..HHHHSSCC CS
         FAT  168 kaLkelleedpeewlprappevvyaylKylwssge..qkealqkL 210 
                   +L++l++ed e +l+  +   ++++ Ky  ++++  +++ lq L
  KHJ35348.1  994 TMLSNLDDEDVEAMLE-STFSTIVQHWKYFDETTQrlIEDLLQYL 1037
                  3444444444433333.2223444555555555554445555555 PP

  == domain 3  score: 142.8 bits;  conditional E-value: 4e-45
                  CCTTCCCCTSSSGHHCCCCT.......TSSSS--CCCHCCCCHH--CCHCHHCCCHCCCCCCCCCTS---SCCCCCHHHHHCCCCCHHHCHHCCHHC CS
         FAT    2 plaaeaaWrlgqWdsmeeylsvlk...kdspdkaffeailalhrnqfdeakeliekarqlldtelsalvgesynraygvlvrvQmlaEleeiiqykq 95  
                  p a+e++W  g W  +e+y+s++     ++++ ++ +++lal+r++ d+++  i+k+r+ l ++ls     s + + +++++++ l+Ele i+  ++
  KHJ35348.1 1573 PFAIESSWATGRWSTLEKYVSMTThsiAEDFNVSIGRVLLALRRKEKDKFQLGIQKIRERLAQSLSFATTSSLRVCHDTMLKLHVLTELEIIAGTDS 1669
                  7899********************9999**************************************************************9999999 PP

                  SS----TTTTTTT----TTS-TTTGCCCTTTCCCCTCCCHCCCHC.HCCS-STTCCCCCCCCHCHHHHCCSTTHHCCCCCHCTT.....TT.TSSCC CS
         FAT   96 klssseklksllktWrkRlpgcqdnvevwqdiltvRslvlspied.llkgvkaemwlkfanlarksgrlslAekaLkelleedpeewlprappevvy 191 
                     +s     +l+t+++R +    +++++q +l +R+ ++   +    +   a+ wl  a+l r+ +  +++ ++ +++ +  +           ++
  KHJ35348.1 1670 ---KSPIIGNILRTLNDRIEVLGAYLNDKQYLLGIRRAAMHLSSLnFSNYDIAASWLTSARLSRRGNASHQSFNSVLQASKLGD--------ESATI 1755
                  ...68999999**************************999555542345566788**********9999999999999977777........6899* PP

                  CHHHHHHHCCHHHHHSSCCHHHHCCTSSCCCSS-SS---............HH.HHCCCTCCCCCCCCCCCT.S...-SSCCHHHHCCHHCTCCCHS CS
         FAT  192 aylKylwssgeqkealqkLreftsellekkeelqsgleaqkeptnleeftkll.arcylkkGewqealqkldwseekieeilqsysaateidpswyk 287 
                  +++++lw +g++++a q+L+  +++ +   + ++++++++ +   ++e+++ll ar++l++++w+ + +++     +++    +y++a++++ +w+k
  KHJ35348.1 1756 EHARLLWRDGHHRKATQSLQGAIESNAFITH-NKNQNDTKFDDFDISEQQNLLtARAHLLLAKWLDSAGQT-----QSSTLRTQYQLAAKTHTNWEK 1846
                  ************************9999875.444444444999**************************5.....5999***************** PP

                  TTCCCCHHHHHCCHHHHHHSSSS..S-TCC.HHHHCCT..CCHHHHTTTSSTTTCHHHHHC CS
         FAT  288 awhtwalfnfevvskeeeqkeeee.pedlq.eyvvpavkgflksislssenslqdtlRLLt 346 
                   ++++++++++ +++e++ + e + ++ l+ e++  +++++l+s+s++ +   q ++R+Lt
  KHJ35348.1 1847 GHYYLGRHYNKLLETEKKLAPELQnEQFLIgEMAKLVIENYLRSLSHGTKYINQTLPRILT 1907
                  ****************999544442667778****************************98 PP

>> UME  UME (NUC010) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  114.2   2.1   6.2e-37   2.2e-33       1     102 []     918    1019 ..     918    1019 .. 1.00

  Alignments for each domain:
  == domain 1  score: 114.2 bits;  conditional E-value: 6.2e-37
         UME    1 fLqqhilgiltrlseklndshgkkslaekkraikaleeliklagssissalpqimacLqsaleidelrsaalsvWatllsnlededleplleqtfal 97  
                  fL+qhilg++t++s ++ d+ +++s+ ekkr+ikaleel+k+a+ + ++ +pqi+acLq al+++el+  a+s+Wat+lsnl+ded+e++le+tf++
  KHJ35348.1  918 FLEQHILGLITNISAVIIDTAHEQSITEKKRNIKALEELVKVAKAHSRIGRPQICACLQLALSQKELQASAFSAWATMLSNLDDEDVEAMLESTFST 1014
                  9************************************************************************************************ PP

         UME   98 ivqlw 102 
                  ivq+w
  KHJ35348.1 1015 IVQHW 1019
                  ****9 PP

>> FATC  FATC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.1   0.0   4.7e-17   1.7e-13       1      32 []    2430    2461 .]    2430    2461 .] 0.97

  Alignments for each domain:
  == domain 1  score: 50.1 bits;  conditional E-value: 4.7e-17
        FATC    1 pLsveqQVdrLIkeATdpeNLaqmyiGWcPww 32  
                  pL ve+QVd+LIk+AT+p  La myiGWc ++
  KHJ35348.1 2430 PLGVEGQVDELIKQATNPLFLASMYIGWCSFL 2461
                  799***************************96 PP

>> MA3  MA3 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0       2.7   9.8e+03      17      66 ..      62     111 ..      57     114 .. 0.78
   2 ?    4.3   0.2     0.011        39      55      86 ..     349     380 ..     344     383 .. 0.91
   3 ?   -0.5   0.1      0.34   1.2e+03      61     100 ..     561     612 ..     552     617 .. 0.79
   4 ?   -0.8   0.1      0.42   1.5e+03      41     109 ..     956    1032 ..     943    1035 .. 0.74
   5 ?    2.1   0.0     0.053   1.9e+02      24      84 ..    1335    1398 ..    1329    1409 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 2.7
                 SHHHHHHHHHHTT--.TTHHHHHHHHHHHHHHS.SS--HHHHHHHHHHHCC CS
         MA3  17 dyeeavsklekLklp.kqeheivkillecaleesktyneyygllleklcek 66 
                 dye   sk+++ + +    h+++++l   +le+  ++n+ y ++ e +c++
  KHJ35348.1  62 DYENSSSKIDDPETQiRHIHKLTYVLSRAVLER-LQKNDPYINFEELICQA 111
                 777777888887777777788888888888888.99999999888888875 PP

  == domain 2  score: 4.3 bits;  conditional E-value: 0.011
                 HHHHHHHHHHCC-HHHHHHHHHHHHHHHHGGG CS
         MA3  55 yygllleklceknlilkkqfekgfwdvlesle 86 
                 +++l+ +k+ e+++ +++ ++k f++ + +le
  KHJ35348.1 349 MLSLICAKILERRKEYSEEMQKNFSEAFHDLE 380
                 78999********************9998886 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 0.34
                 HHHHCC-HHHHHHHHHHHHHHHHGGGGS-HH...............HHHHHH CS
         MA3  61 eklceknlilkkqfekgfwdvlesledleld............ipeairnla 100
                 +kl+++  + +++fe++ ++++ ++ ++               ++ air+la
  KHJ35348.1 561 KKLVQSSILDQQDFENTSNQIIATFAKIIKTnvfseskrcrvlTMMAIRKLA 612
                 7899999999*************99998776666666666666666666666 PP

  == domain 4  score: -0.8 bits;  conditional E-value: 0.42
                  HHHHHHHS.SS--HHHHHHHHHHHCC-HHHHHHHHHHHHHHHHGGGGS-HH............HHHHHHHHHHHHHHT CS
         MA3   41 llecaleesktyneyygllleklceknlilkkqfekgfwdvlesledleld.........ipeairnlaefvarlise 109 
                  l++ a ++s+  ++ ++  l+    +++ l+++   +   +l++l+d ++          i + ++++ e  +rli++
  KHJ35348.1  956 LVKVAKAHSRIGRPQICACLQLAL-SQKELQASAFSAWATMLSNLDDEDVEamlestfstIVQHWKYFDETTQRLIED 1032
                  555555555666666665555555.6777777777788888888998888899999999999********99999864 PP

  == domain 5  score: 2.1 bits;  conditional E-value: 0.053
                  HHHHTT--.TTHHHHHHHHHHHHHHS...SS--HHHHHHHHHHHCC-HHHHHHHHHHHHHHHHG CS
         MA3   24 klekLklp.kqeheivkillecalee..sktyneyygllleklceknlilkkqfekgfwdvles 84  
                  ++++L+++ ++ + ++ ++++   e+  ++  +e +++l+ kl    ++ +++fe + + v++ 
  KHJ35348.1 1335 RIKDLSIAgFLLPYLILHVIVAGDEKqrQNIGSELLAVLIYKLPNDSSVPREDFELCIEIVFRV 1398
                  699******************999998888889*********************9998777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2461 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       840  (0.0468515); expected 358.6 (0.02)
Passed bias filter:                      580  (0.0323498); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.27u 0.29s 00:00:01.56 Elapsed: 00:00:00.49
# Mc/sec: 15014.33
//
Query:       KHJ35349.1  [L=795]
Description: putative intracellular protein transport protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.4e-139  465.9   2.7   2.2e-139  465.2   0.0    2.1  2  Rgp1        Rgp1
    0.00022   21.3   0.0    0.00072   19.6   0.0    1.8  1  Arrestin_N  Arrestin (or S-antigen), N-terminal domain


Domain annotation for each model (and alignments):
>> Rgp1  Rgp1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   2.0     0.077   6.9e+02      54     110 ..     122     191 ..      35     214 .. 0.55
   2 !  465.2   0.0  2.5e-143  2.2e-139       2     416 ..     334     728 ..     333     729 .. 0.91

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.077
        Rgp1  54 gglgwgsiseslgellggnels.tlkemresa..esksiPllstpq.slLfvdLtLaPGE.........s 110
                 ++++  si++s ++  +gn +s +++ +r+ +  +++s  l +t q  +Lf   +L P+          s
  KHJ35349.1 122 RSVSIVSIGTSEKGYDQGNSVSnSIERSRKGQksHIRSASLQITSQkQVLFNQRQLTPTSfsvsprfrkS 191
                 2233335544444444433333033333332223566666666666346777777766655555555444 PP

  == domain 2  score: 465.2 bits;  conditional E-value: 2.5e-143
        Rgp1   2 LlmgYvQisGsftlDgslineskfeevkrkavvggs.ggvvglekskrssgllgglgwgsiseslgellggnelstlkemresaesksiPllstpqslL 99 
                 L+mgYvQ++Gsf lD+sl+++++f evk+k+v+gg+ ggvvg+e +kr+sg+l+g+gw +i+  +++llg nels++ke+re+ +s+siP+l tpqs+L
  KHJ35349.1 334 LMMGYVQVNGSFILDSSLVDQAPFGEVKKKGVIGGQgGGVVGVELNKRDSGFLRGFGWANIGA-ISDLLGSNELSSIKEFREIISSRSIPILATPQSIL 431
                 9*********************************777***********************765.9********************************** PP

        Rgp1 100 fvdLtLaPGEsksFefsfkLPkdLpPsyrgkaikisYsLviGtqrpggak.qqvksvevPirvlpsvnssgeqlghdLmspyillrdearvkevksrkk 197
                 fvdL+L+PGEsk++++sfkLP++LpPs+rgkaiki Y+LviG+qrpgg+  qqvk +evP+rvl+sv+ssg+ l hdLm py++ +d+a +k +     
  KHJ35349.1 432 FVDLHLSPGESKCYNYSFKLPHGLPPSHRGKAIKIIYKLVIGIQRPGGTSqQQVKLIEVPFRVLGSVDSSGKLLCHDLMCPYVIFQDQACIKLLP---- 526
                 **********************************************99999*******************************************9.... PP

        Rgp1 198 ssssskekkkskskkkseksesskedFlkyveelleneseskdieellspqlevqfeeeedseeneesrrksvvskesssvkeaidllilrsqlasnlq 296
                  +++s+ ++ +k++++   ses +++F++y+e+ll+++++  +    +sp  ++               ++s+  +e +++keaid++ilrs+ a + q
  KHJ35349.1 527 -EQHSNLTALRKKSNS---SESRLKNFVSYTEKLLSKPRNHIS-PYNISPRTTMRP-------------HSSLFVEEPTTIKEAIDMAILRSSNATETQ 607
                 .222222222333333...34569**************88843.555566655542.............34555555566************9996666 PP

        Rgp1 297 ks...yeIarngkrvAvltLskpaYrlgetitlvidfsdaeklkvyavtatLesfEkidpslalrseasikrvtrkvvaesseitlfarervsfkltip 392
                 k+   +eIar+g++vAvl+L++paYrlgeti +vidf+da k+++ya++a+Les+E++d+s++lrseasi + trk+++++se+tlf++ r  f++tip
  KHJ35349.1 608 KNpnrFEIARSGRKVAVLMLTRPAYRLGETIYVVIDFTDA-KIPCYAIHASLESSERVDNSISLRSEASIFQSTRKTYVTHSESTLFSK-RTIFTPTIP 704
                 66777**********************************9.8***********************************************.********* PP

        Rgp1 393 ksatpqFkTsgvqlkWllrleFvl 416
                 + atp F T+gv+l+W++r+eF++
  KHJ35349.1 705 TLATPGFITTGVSLEWRIRVEFIT 728
                 ***********************8 PP

>> Arrestin_N  Arrestin (or S-antigen), N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.0     8e-08   0.00072      93     135 ..     444     486 ..     424     499 .. 0.85

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 8e-08
                 EEEEEE---TTS--SECSGEEEEEEEEEEEEECCCE--C.CCE CS
  Arrestin_N  93 afpFsfelPknlpsSfeGkaggvrYevkvtldrpwkidkkkkk 135
                  +++sf+lP+ lp+S+ Gka ++ Y++ + ++rp   ++++ k
  KHJ35349.1 444 CYNYSFKLPHGLPPSHRGKAIKIIYKLVIGIQRPGGTSQQQVK 486
                 59********************************977775554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (795 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       549  (0.0306208); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.66u 0.25s 00:00:00.91 Elapsed: 00:00:00.42
# Mc/sec: 5629.04
//
Query:       KHJ35350.1  [L=775]
Description: putative 6-phosphofructokinase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.8e-188  622.8   0.2   9.8e-108  359.8   0.3    2.1  2  PFK       Phosphofructokinase
  ------ inclusion threshold ------
      0.083   12.7   0.2        0.2   11.4   0.2    1.6  1  UVR       UvrB/uvrC motif
       0.56   10.0   2.1        1.9    8.3   0.0    2.6  3  TgMIC1    Toxoplasma gondii micronemal protein 1 TgMIC1


Domain annotation for each model (and alignments):
>> PFK  Phosphofructokinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  359.8   0.3  1.6e-111  9.8e-108       1     283 [.      16     324 ..      16     325 .. 0.97
   2 !  261.1   0.0   1.9e-81   1.1e-77       1     283 [.     407     703 ..     407     704 .. 0.90

  Alignments for each domain:
  == domain 1  score: 359.8 bits;  conditional E-value: 1.6e-111
                 EEEEEEESS--TTHHHHHHHHHHHHHHTT-EEEEETTHHHHHHTT..-EEEE-SGGGTT-TT--S-TT-----GGGGSHHHHHHHHHHHHHHT--EEEE CS
         PFK   1 riailtsGGdapGmNaairavvrtaikkglevygireGfeGliee..eiekltledvsgilsegGtiLgsaRskefkeregrkkaaenlkklgidaLvv 97 
                 ria++tsGGd+pGmNa++ravvr+ ik+g+e y+i+eG+eGl+++   i+k++++dv+g+lsegGt++g+aR+ +f er+gr   a+nl  +gidaL++
  KHJ35350.1  16 RIAVMTSGGDSPGMNAVVRAVVRYTIKSGCEAYCIYEGYEGLVRGkdLIRKMDWSDVRGWLSEGGTLIGTARCMSFYERSGRLLGAKNLILNGIDALII 114
                 7******************************************9987788************************************************* PP

                 EESHHHHHHHHHHHHT..T.....................--EEEEEEETT---TT-S--EEHHHHHHHHHHHHHHHHHHHHHHT-EEEEEES-TT-TH CS
         PFK  98 iGGdgslkganklseerkgllee.................lkivgiPkTidNDipgtdytiGfdTAlntiveaidklkstakshkrvfvvEvmGrncGw 179
                 +GGdgsl+ga+k++ e+++ll+e                 l+ivgi+++idND+ gtd tiG+ +Al++i+e++d ++ ta+sh+r+fv+EvmGr+cGw
  KHJ35350.1 115 CGGDGSLTGADKFRAEWPSLLKElvqtkdltqeqvnpfqyLNIVGIVGSIDNDMSGTDATIGCFSALSRICEMVDYIEATASSHSRAFVIEVMGRHCGW 213
                 *******************9999**************************************************************************** PP

                 HHHHHHHHHT-SEEE-TTS---HH...HHHHHHHHHHT.T-S-EEEEEESSS..S-.....HHHHHHHHHHHHSS..-EEEEE-GGGGG-S---HHHHH CS
         PFK 180 lAlmaglaggadvilipEepfdie...eliekikklrkkgkkksiivvaEgakdkeg..iiaeelakeieektgi..evrvtvlGhlqrGgspsafDri 271
                 lAlmag+a+gad+++ipE+p+  +   e+++++k++r+ gk+k+i++vaEga+d++g  i  e +++++++k+g+  ++r+t+lGh+qrGg+++afDr+
  KHJ35350.1 214 LALMAGVATGADFVFIPEKPVAGNwrdEMCKNVKRQREFGKRKTIVIVAEGAQDSQGikILPEVVKDLLADKKGLalDTRITTLGHVQRGGKACAFDRY 312
                 ********************9887889**********99**************988897888889999988877677********************** PP

                 HHHHHHHHHHHH CS
         PFK 272 latrlGikavel 283
                 lat+ G++av++
  KHJ35350.1 313 LATLQGVEAVKA 324
                 **********97 PP

  == domain 2  score: 261.1 bits;  conditional E-value: 1.9e-81
                 EEEEEEESS--TTHHHHHHHHHHHHHHTT-EEEEETTHHHHHHTT.......-EEEE-SGGGTT-TT--S-TT-----GGGGSHHHHHHHHHHHHHHT- CS
         PFK   1 riailtsGGdapGmNaairavvrtaikkglevygireGfeGliee.......eiekltledvsgilsegGtiLgsaRskefkeregrkkaaenlkklgi 92 
                 ria +++G++a GmNaa+ra+v +++++g+++++i++Gf G+ ++        ++++++ +v+g++s+gG+ +g++R  + +  +g++ +a+ ++ +++
  KHJ35350.1 407 RIAFIHVGAPAGGMNAATRAAVAYCLTRGHTPIAIHNGFAGFARHhgdkplgAVRDFDWLEVDGWASRGGSEIGTNRELPLE--SGLDYIASLFELYKF 503
                 79****************************************8874444444445788**********************85..79************* PP

                 -EEEEEESHHHHHHHHHHHHT..T.....--EEEEEEETT---TT-S--EEHHHHHHHHHHHHHHHHHHHHHH.T-EEEEEES-TT-THHHHHHHHHHT CS
         PFK  93 daLvviGGdgslkganklseerkgllee.lkivgiPkTidNDipgtdytiGfdTAlntiveaidklkstaksh.krvfvvEvmGrncGwlAlmaglagg 189
                 d+L++iGG++ ++++++l+ +r+++++  +++ ++P+Ti+N++pgt+y++G+dT+l+ +v+++d +k +a+++ +r+fv+E++G+++G++A+ agla+g
  KHJ35350.1 504 DGLFIIGGFEGFHALSQLRIARSKYQSLcIPMTLLPATISNNVPGTEYSLGSDTCLDELVRYCDTVKLSASATrRRIFVIETQGGRSGYVATLAGLAAG 602
                 ********************998877668********************************************9************************* PP

                 -SEEE-TTS---HHHHHHHHHHHH.....T.T-S-E....EEEEESSS..S-...HHHHHHHH.HHH.HSS-EEEEE-GGGGG-S---HHHHHHHHHHH CS
         PFK 190 advilipEepfdieeliekikklr.....kkgkkks....iivvaEgakdkegiiaeelakei.eek.tgievrvtvlGhlqrGgspsafDrilatrlG 277
                 a +++ipEe ++i+ l+++ik+ +     ++g+  s    +i+v+E+a+    ++a+ +a+ i +e+ + +e+r +++Gh+q+Gg ps++Dr+ a rl+
  KHJ35350.1 603 ASAVYIPEEGISIDMLAADIKHIKnlfkqDSGH--SrsgkLILVNEKASP--VYSAKLIADIIrNEAaNRFESRDSIPGHVQQGGIPSPMDRTRAVRLA 697
                 ***********************9887542222..13467********95..3568888888853331356**************************** PP

                 HHHHHH CS
         PFK 278 ikavel 283
                 ik++e+
  KHJ35350.1 698 IKCIEH 703
                 ***996 PP

>> UVR  UvrB/uvrC motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.2   3.4e-05       0.2      13      29 ..     361     377 ..     360     379 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.4e-05
         UVR  13 eAaenedFEkAAklRDq 29 
                 +A+++ dF++A+ lRD 
  KHJ35350.1 361 KAIKAKDFDRAMSLRDT 377
                 7***************7 PP

>> TgMIC1  Toxoplasma gondii micronemal protein 1 TgMIC1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1      0.91   5.5e+03      81      99 ..      33      51 ..      16      65 .. 0.55
   2 ?    8.3   0.0   0.00031       1.9      64     124 ..     166     227 ..     160     234 .. 0.86
   3 ?   -0.2   0.1      0.13   7.6e+02      91     124 ..     573     606 ..     552     609 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 0.91
      TgMIC1 81 lavvldyarlnaalrsvay 99
                +  v+ y+ ++++  +  y
  KHJ35350.1 33 VRAVVRYTIKSGCEAYCIY 51
                2234445555554444444 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00031
      TgMIC1  64 eaaGsavltiGlGs.kGrlavvldyarlnaalrsvayvvedsGcksieevllqGlnsGaklv 124
                 +    +  tiG  s   r++ ++dy    a+  s a+v+e  G ++    l+ G+++Ga +v
  KHJ35350.1 166 NDMSGTDATIGCFSaLSRICEMVDYIEATASSHSRAFVIEVMGRHCGWLALMAGVATGADFV 227
                 55555677898654168******************************************988 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.13
      TgMIC1  91 naalrsvayvvedsGcksieevllqGlnsGaklv 124
                 ++a r   +v+e  G +s    +l Gl++Ga  v
  KHJ35350.1 573 ASATRRRIFVIETQGGRSGYVATLAGLAAGASAV 606
                 457788899**********99*********9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (775 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.61u 0.24s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 5595.20
//
Query:       KHJ35351.1  [L=122]
Description: putative cytochrome c oxidase-assembly factor cox- precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-32  111.7   0.1    2.7e-32  111.1   0.1    1.3  1  COX16     Cytochrome c oxidase assembly protein COX16


Domain annotation for each model (and alignments):
>> COX16  Cytochrome c oxidase assembly protein COX16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.1   0.1   1.5e-36   2.7e-32       1      79 []      39     116 ..      39     116 .. 0.98

  Alignments for each domain:
  == domain 1  score: 111.1 bits;  conditional E-value: 1.5e-36
       COX16   1 llfGlPflllivgGsfgLteftqlryevrdrkvkelskeealelkkkrrkvdleeeyerlqakldlddWenkRvpRpke 79 
                 llfG Pf++++v+Gsf+Lt++t++r+e++drkv++++ eeal+++k  rkvd++eey+rl+ak dld+We+kRv+R+++
  KHJ35351.1  39 LLFGFPFITTMVAGSFFLTPATAVRFEKHDRKVRRMTSEEALSIGKTGRKVDMKEEYYRLAAK-DLDNWEQKRVKRLPG 116
                 79************************************************************9.************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       542  (0.0302304); expected 358.6 (0.02)
Passed bias filter:                      467  (0.0260472); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 899.10
//
Query:       KHJ35352.1  [L=574]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (574 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       763  (0.0425568); expected 358.6 (0.02)
Passed bias filter:                      356  (0.0198561); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 4262.26
//
Query:       KHJ35353.1  [L=327]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
  ------ inclusion threshold ------
       0.33   10.2   1.3       0.51    9.5   1.3    1.2  1  Baculo_ME53  Baculoviridae ME53


Domain annotation for each model (and alignments):
>> Baculo_ME53  Baculoviridae ME53
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   1.3   2.8e-05      0.51     255     295 ..     182     223 ..     162     235 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 2.8e-05
  Baculo_ME53 255 dgavvfylkkedkeycklckktkly.tknPvlscskcGftnv 295
                   g+v  y+k++  e+ck c+      +   v sc+ cG tn 
   KHJ35353.1 182 SGIVRSYKKQQPLEFCKRCNGHHPSkYCSRVPSCANCGSTNH 223
                  478889999999********5444469999**********96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       837  (0.0466841); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2480.86
//
Query:       KHJ35354.1  [L=550]
Description: putative mfs transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.7e-33  114.9  38.8    1.6e-31  109.5  17.7    2.1  2  MFS_1     Major Facilitator Superfamily
      9e-13   47.9   0.8      9e-13   47.9   0.8    2.2  2  Sugar_tr  Sugar (and other) transporter
    0.00022   19.8   0.4    0.00022   19.8   0.4    1.5  2  TRI12     Fungal trichothecene efflux pump (TRI12)
      0.001   17.8   1.5      0.001   17.8   1.5    3.1  3  MFS_2     MFS/sugar transport protein


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  109.5  17.7   3.6e-35   1.6e-31       2     353 .]      21     462 ..      20     462 .. 0.73
   2 !   19.6  13.1   7.9e-08   0.00035      17     184 ..     332     512 ..     328     543 .. 0.74

  Alignments for each domain:
  == domain 1  score: 109.5 bits;  conditional E-value: 3.6e-35
       MFS_1   2 llaaflsalarsilgpalplalaedlgispse....igllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvlrvlqG 96 
                 +++ +     ++ ++p +p  + e++g+ + +    +g+  +++++ ++++++++Gr sdrfGr++ +++gl+++ +++l++ f+s+l + +  r++qG
  KHJ35354.1  21 VICRVAEPVVFTSINPYIP-EMIESFGVPKNQipkwAGITSAVFSISQSITAIFWGRASDRFGRKPAIITGLTCTMICSLIWGFSSNLAMAVTTRAVQG 118
                 577778888999*******.899*********9999999***************************************77777967777********** PP

       MFS_1  97 lgagalfpagaaliadwfpk.eergraigllsagfslGailgpllggllasslg................Wravfyilaivsllafvlfllllpeeppe 178
                 ++ g + ++  +++a+++ + e ++ra++++ + +slG+i+gp +gg++a  +                 + ++ +++ +++++++  ++l+l e++  
  KHJ35354.1 119 AFNGNIGTIR-TMVAEMVQDkELQPRAFSIMPMVWSLGSIFGPSFGGFFAKPAEhmpslfghnsffirfpFALPNILASALFMVGITTAILFLKETHIL 216
                 **86666666.666666666599***************************8777999999999999776666666666666666666677888777777 PP

       MFS_1 179 rkrkspkeee.................................................kgtgpaplvpawkallkdp............vl.w....i 211
                 ++ k++  ++                                                 k                              v+ w     
  KHJ35354.1 217 HSQKKDYGLLlgakikksmrsfhdwpkksshsnqdeftetsrllassnpplsqtrtmqnK-----------------LispkqksttlleVFtWqtslN 298
                 777777776677777777777777777777776666666666666655555554333221.................0222233333333224776766 PP

       MFS_1 212 llialllfffgfsglltllpl............y......lqevlglsglllaglllallalvgail.allagrlsdrlgrrrrlllallllllaalgl 291
                 l+i ++l +    ++ +llp+            y      +   +gl     +g+l+ l++++++++ +ll+  +++r+g  + l + ++++ +++++ 
  KHJ35354.1 299 LFINAFLSM-HSVTYDQLLPIlmhnspskpsrsYgifpikFTGGFGLE-SSRIGTLFTLYGILSCFVqFLLFPPIARRFGVLKCLKVCVIIFPIIYFLT 395
                 777777774.66667777777444444455555244454457777777.588888888888888888888**********9888888888888888888 PP

       MFS_1 292 allavt....ssavllllvlvliGfglgfvfpsllalasdlapp.eeagtasglfntagslggalgp 353
                  +  +     + ++l+ +++ + +++  f++p++l l++++a      gt++g++  + s+ +a+gp
  KHJ35354.1 396 PYSVLVqsslHQQILITIIMSIKSVAIIFANPCSLILLTNSAKSlTILGTLNGVAVCLASICRAIGP 462
                 8777777554555555555555666777889*****9999993336667777777777777777776 PP

  == domain 2  score: 19.6 bits;  conditional E-value: 7.9e-08
       MFS_1  17 palplalaedlgispseigllltlyalgaavaslpl.GrlsdrfGrrrvlllglllfalglllll.fa.......sslwlllvlrvlqGlgagalfpag 106
                  ++p+  +  +g+  s ig+l+tly++++++ +++l  +++ rfG  ++l +++++f +  ++l+ ++       ++  l+ +   + +++  +++p +
  KHJ35354.1 332 GIFPIKFTGGFGLESSRIGTLFTLYGILSCFVQFLLfPPIARRFGVLKCLKVCVIIFPII-YFLTpYSvlvqsslHQQILITIIMSIKSVAIIFANPCS 429
                 5788888999*************************999999*******************.77776533455333222223333335555556777888 PP

       MFS_1 107 aaliadwfpk.eergraigllsagfslGailgpllggllasslg.....Wravfyilaivsllafv.lfllllpeepp.erkrksp 184
                 ++l++  ++  +  g  +g++   +s+  ++gp++ g     +g       a++++l i++++++v +  ++++e +p e++ +s+
  KHJ35354.1 430 LILLTNSAKSlTILGTLNGVAVCLASICRAIGPAICGPTF-TWGikndyTIAPWWLLSILAIIGAVpI--WWIVEAKPsENSEVSD 512
                 8888888888888888888888888888888866655444.245788878888***********9933..5555544404444444 PP

>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.8     2e-16     9e-13      46     189 ..      54     203 ..      32     279 .. 0.89
   2 ?    1.9   7.6     0.018        81     295     431 ..     352     491 ..     281     506 .. 0.68

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 2e-16
                 .HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHH CS
    Sugar_tr  46 vlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlqaaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyq 144
                 ++ g++ ++f++ + i+++f g ++drfGRk++++++ ++++i++++ +++    ++ + ++ R + G + G + ++ +m +  +  k+l  +  s+  
  KHJ35354.1  54 KWAGITSAVFSISQSITAIFWGRASDRFGRKPAIITGLTCTMICSLIWGFSS---NLAMAVTTRAVQGAFNGNIGTIRTMVAEMVQDKELQPRAFSIMP 149
                 46799***********************************************...9******************9999999999999************ PP

                 HHHHHHHHHHHHHHHHHHTSS-.........TTHHHHHHHCCHHHHHHHHHHGG CS
    Sugar_tr 145 laitfGilvaaifglglnktsn.........adgwrillglqlvpallllilll 189
                 + +++G +++  fg +++k  +         +   r++++l  ++a +l+++++
  KHJ35354.1 150 MVWSLGSIFGPSFGGFFAKPAEhmpslfghnSFFIRFPFALPNILASALFMVGI 203
                 *****************8888878889886555568889998888888888764 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.018
                 HHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH....HHHHTTSS.....CHHHHHHHHHHHHHHHTTTTHHHHHHHHHHS.HTTTHHHHH CS
    Sugar_tr 295 ivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilg..ivalllvaks..kaasivaivfialfialfalgwgpvpwvlvsElf.pqsvRskal 388
                 ++    ++++fv ++l   + RR  +l ++ ++ i f i+   ++  +lv++s  + + i +i+ i  ++++fa   +p+  +l++  + ++ + ++  
  KHJ35354.1 352 LFTLYGILSCFVQFLLFPPIARRFGVLKCLKVCVIIFPIIYflTPYSVLVQSSlhQQILITIIMSIKSVAIIFA---NPCSLILLTNSAkSLTILGTLN 447
                 34445566777777777777777777777777777666655555666666664334444444444444444444...6776666665541567777778 PP

                 HHHHHHHHHHHHHH.HHHHHHHHCHHHT-HHHHHHHHHHHHHHH CS
    Sugar_tr 389 aiavavnwlanfli.sllfpiiteaigggyvflvfaglavlfii 431
                  +av++  ++  +  +++ p++t  i++ y+ +++  l +l+ii
  KHJ35354.1 448 GVAVCLASICRAIGpAICGPTFTWGIKNDYTIAPWWLLSILAII 491
                 88888888887776346677777788877777777777766665 PP

>> TRI12  Fungal trichothecene efflux pump (TRI12)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.4   4.9e-08   0.00022      47     162 ..      18     138 ..       6     164 .. 0.82
   2 ?   -3.6   0.4      0.61   2.7e+03     189     221 ..     399     429 ..     361     459 .. 0.66

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 4.9e-08
       TRI12  47 aafslnvvatyfvlqasasalpnilqdvgqsens.....slfstlwttgqavsilvmgrltdrfgrrpfvilthilglvgaivgctatkfntllaamtl 140
                 a + +  va  +v+ +    +p++++  g  +n+     ++ s+++++ q+++ +  gr +drfgr+p +i      ++ +++   ++++   +++ ++
  KHJ35354.1  18 AILVICRVAEPVVFTSINPYIPEMIESFGVPKNQipkwaGITSAVFSISQSITAIFWGRASDRFGRKPAIITGLTCTMICSLIWGFSSNLAMAVTTRAV 116
                 555566666667777777778888888888877655454899*****************************9999999999998888889999999999 PP

       TRI12 141 lgvaagpagasplfvgelmsnk 162
                  g   g  g+   +v e++ +k
  KHJ35354.1 117 QGAFNGNIGTIRTMVAEMVQDK 138
                 9999*******99999999887 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 0.61
       TRI12 189 laiqgswrwifyiyiitsaiavllivvwyypps 221
                 + +q s    + i ii+s  +v +i  +  p s
  KHJ35354.1 399 VLVQSSLHQQILITIIMSIKSVAII--FANPCS 429
                 4566666666777777776666543..444444 PP

>> MFS_2  MFS/sugar transport protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   1.5   2.2e-07     0.001     260     349 ..      55     141 ..      52     165 .. 0.88
   2 ?    0.5   7.5     0.039   1.7e+02     261     341 ..     350     435 ..     341     471 .. 0.69
   3 ?   -0.3   4.9     0.068     3e+02      75     202 ..     385     509 ..     383     523 .. 0.76

  Alignments for each domain:
  == domain 1  score: 17.8 bits;  conditional E-value: 2.2e-07
       MFS_2 260 aasvfllvvtisallgiplwqplakrlgkkntyllgalltivllvlvlllqpsnlllflvllviagfgvgvaallpwsmladvvDygelk 349
                 +a + ++v+ is+ +++++w ++  r+g+k +++ g++ t++ +++  +   snl+++++  ++ g + g ++++   m+a++v + el+
  KHJ35354.1  55 WAGITSAVFSISQSITAIFWGRASDRFGRKPAIITGLTCTMICSLIWGFS--SNLAMAVTTRAVQGAFNGNIGTI-RTMVAEMVQDKELQ 141
                 67788999******************************999999887777..9************9997777765.67899999998875 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.039
       MFS_2 261 asvfllvvtisallgiplwqplakrlg.kkntyllgalltivllvlvlll....qpsnlllflvllviagfgvgvaallpwsmlad 341
                  ++f+l  ++s ++ ++l++p+a+r+g  k + ++ +++ i+ ++ ++ +    +  + +l ++++ i+++++++a+     +l+ 
  KHJ35354.1 350 GTLFTLYGILSCFVQFLLFPPIARRFGvLKCLKVCVIIFPIIYFLTPYSVlvqsSLHQQILITIIMSIKSVAIIFANPCSLILLTN 435
                 567888889******************54456666677777777777777766544555555666666666666666666666655 PP

  == domain 3  score: -0.3 bits;  conditional E-value: 0.068
       MFS_2  75 aiilavsiillftppelsqs.akfiwllvtyillrilytlfeipyvslvpvltkdydeRtsltsvrsflsvlggvlaailafllvlilgglkserkgyl 172
                  ii+ + ++l  ++  ++ s ++ i++++++ +  +++ + + ++  l+++ +k  +   +l++v   l+ +  +++ ++ ++  + +g    +++ ++
  KHJ35354.1 385 VIIFPIIYFLTPYSVLVQSSlHQQILITIIMSIKSVAIIFANPCSLILLTNSAKSLTILGTLNGVAVCLASICRAIGPAICGPT-FTWGI---KNDYTI 479
                 556665555554444444448999999999999999999999999999999988888888899999888888888888888888.44455...899999 PP

       MFS_2 173 ifaliialLmllgviivvlgtkervemrkk 202
                 +  ++ ++L+++g++ +++++  + +++++
  KHJ35354.1 480 APWWLLSILAIIGAVPIWWIVEAKPSENSE 509
                 99*******************999877333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (550 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4031.21
//
Query:       KHJ35355.1  [L=316]
Description: putative glycosyltransferase family 32 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    0.00035   21.1   0.0    0.00072   20.1   0.0    1.5  1  Gly_transf_sug  Glycosyltransferase sugar-binding region cont


Domain annotation for each model (and alignments):
>> Gly_transf_sug  Glycosyltransferase sugar-binding region containing DXD motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.0     4e-08   0.00072       9      84 ..      43     109 ..      23     123 .. 0.77

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 4e-08
  Gly_transf_sug   9 eslakahpdyqvvvlskelekvrvaildlefllsdtpwfeeakkllplfialsDllRlaiLykyGGiYlDtDvivl 84 
                      ++ + +pd+ +++ + + +       dl ++  + p++++a k+  + i + Dl+R  +L+ yGG+Y  +D+   
      KHJ35355.1  43 TQWSDSNPDWTHIIRTSSPN-------DLLEIIRSFPELQDAIKRFSY-I-RKDLIRHILLWYYGGFYASIDTWSR 109
                     57888888888888777633.......666666666655555554444.4.79*******************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (316 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       362  (0.0201908); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.22s 00:00:00.65 Elapsed: 00:00:00.38
# Mc/sec: 2505.54
//
Query:       KHJ35356.1  [L=790]
Description: putative pa domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.6e-28   98.6   0.0    4.8e-28   97.7   0.0    1.4  1  TFR_dimer      Transferrin receptor-like dimerisation domain
    8.4e-19   68.0   0.0    1.4e-18   67.4   0.0    1.3  1  Peptidase_M28  Peptidase family M28
    2.2e-10   40.4   0.8    4.1e-10   39.6   0.1    1.8  2  PA             PA domain
  ------ inclusion threshold ------
        0.1   12.0   0.0       0.21   11.0   0.0    1.4  1  Nicastrin      Nicastrin


Domain annotation for each model (and alignments):
>> TFR_dimer  Transferrin receptor-like dimerisation domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.7   0.0   1.1e-31   4.8e-28       9     118 ..     671     787 ..     665     790 .] 0.88

  Alignments for each domain:
  == domain 1  score: 97.7 bits;  conditional E-value: 1.1e-31
   TFR_dimer   9 aikkfkkaaeefdkwadkwed........v..ggaessllavrkrrkiNdklmrferafldpeglpgrpwykHvvfgpslwtgyagatFPgirdaieeg 97 
                 ai+k++ aa++ d+ a+++ +        +    +   ++   +++k+Ndk+++ferafl+ +gl+grp +kHvvf+p+ wtgy+g++FPg+ ++i+++
  KHJ35356.1 671 AIDKLELAARNHDALAADLASeirqdfpwWkwPRKIRLQY---HIKKVNDKYKYFERAFLYSKGLDGRPSFKHVVFAPDIWTGYSGSVFPGLSESINKK 766
                 8999*************99998887766423344444455...555***************************************************** PP

   TFR_dimer  98 dweeaqeqisivakaiesaae 118
                 dwe+a ++++i+ ++i +a +
  KHJ35356.1 767 DWENAGKWVEIIRECIVKARK 787
                 ****************99976 PP

>> Peptidase_M28  Peptidase family M28
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.4   0.0     3e-22   1.4e-18       1     180 [.     382     574 ..     382     579 .. 0.82

  Alignments for each domain:
  == domain 1  score: 67.4 bits;  conditional E-value: 3e-22
                    EEEEEESTTCESEEEEEEEE--B-TTTTCCT---TTTTHHHHHHHHHHHHHCHH...GGCCSSEEEEEEEESSCSGSSHHHHHHHHHHC..CCTTE CS
  Peptidase_M28   1 NviatlegkatdevlllgAHyDsvgvgrgpifvGAdDnAsgvaalLelarvlaa...sgsrpkrgvrflffdaEEagllGSkafakakp..elkki 91 
                    Nvi+ ++g+ ++ev++lg H D +         GA D  sg aal e++r +     +g +p r+++f+ +d+EE+gl+GS+ +++++    ++  
     KHJ35356.1 382 NVIGVINGTLSNEVVVLGNHRDAWIA---G---GAADPNSGSAALNEVIRSFGLalsKGWKPLRTIVFASWDGEEYGLVGSTEWVEDHLswLSASS 471
                    9********9999************5...7...9****************99988888889************************83335488888 PP

                    EEEEEECS-SSSS--EEEHHHHHHCHHHHHHHHHHHHHTT-TTSCCEEEEESSTT-.....STTHHHH.TTT--EEEE.........CTSSS-TTT CS
  Peptidase_M28  92 aavlnlDmvgsggkellfesgdkssselekelkalakpvgraaaedpfdersgrgr.....sDhspfl.kagvpvldl.........aetgfpevy 172
                     a+ln+D+ g++g+++  + ++   + l + ++ + +p +++  +++ d  +  +r     sD+++f+   g+p ld+          e  + ++y
     KHJ35356.1 472 IAYLNVDI-GTSGNKFKAKASPLLNRVLFEITSVVPSPNQTILGQTVADLWNNGIRtmgsgSDFTAFQdLVGIPSLDIgfeedlsriGEGSAVYHY 566
                    99*****8.5555566657888888888888887888877777776665444333333556*******4467************997666778999 PP

                    TSTTSSGG CS
  Peptidase_M28 173 HtprDtld 180
                    H++ D + 
     KHJ35356.1 567 HSNYDSFH 574
                    *9999875 PP

>> PA  PA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.6   0.1   9.1e-14   4.1e-10       1      71 [.     188     264 ..     188     276 .. 0.86
   2 ?   -3.4   0.0       2.2     1e+04      65      84 ..     301     320 ..     291     323 .. 0.69

  Alignments for each domain:
  == domain 1  score: 39.6 bits;  conditional E-value: 9.1e-14
          PA   1 vtgplVyscfagygisadfe.....gvdvkGkivLvqr....tfaeKarnAqaaGAagviivndge.lgaatgasgnegep 71 
                 vt+p V   +++yg+ adfe     +++++Gk++Lv r     ++ K++ Aq+ G agv++++d++ +g  t+++gn+ +p
  KHJ35356.1 188 VTAPYV---YVNYGTYADFEdliqaNISLAGKVALV-RygliFRGLKVKRAQELGMAGVVMYSDPGdDGVVTEENGNAAYP 264
                 799***...***************************.6588777******************8887766666666666555 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.2
          PA  65 sgnegepdgitiPavgvsre 84 
                 + ++ e++  +iP++ +s+ 
  KHJ35356.1 301 PRQSVENSIPSIPSIPISYL 320
                 44556667788999988875 PP

>> Nicastrin  Nicastrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   4.7e-05      0.21      19      74 ..     407     462 ..     404     473 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.7e-05
   Nicastrin  19 slGaessvsslvallaaaealskllkdisnlkrnvlFvffnGEsydYiGSqrfvyd 74 
                 + Ga ++ s+ +al  +++++  +l +  +  r ++F+ ++GE y+ +GS   v d
  KHJ35356.1 407 AGGAADPNSGSAALNEVIRSFGLALSKGWKPLRTIVFASWDGEEYGLVGSTEWVED 462
                 569999999************99999999999******************999876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (790 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       449  (0.0250432); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.63u 0.23s 00:00:00.86 Elapsed: 00:00:00.39
# Mc/sec: 6027.20
//
Query:       KHJ35357.1  [L=668]
Description: putative abc1 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-21   76.6   0.0    2.5e-12   47.0   0.0    2.6  2  ABC1      ABC1 family
  ------ inclusion threshold ------
      0.083   12.8   0.0       0.21   11.4   0.0    1.6  1  APH       Phosphotransferase enzyme family


Domain annotation for each model (and alignments):
>> ABC1  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.7   0.0   5.3e-10   4.8e-06       4      33 ..     211     240 ..     208     245 .. 0.93
   2 !   47.0   0.0   2.8e-16   2.5e-12      36     117 ..     278     359 ..     269     361 .. 0.93

  Alignments for each domain:
  == domain 1  score: 26.7 bits;  conditional E-value: 5.3e-10
        ABC1   4 gkkleeiFaefdeePiAaASiaqVhrAklk 33 
                 g++ eeiF+ fde+P++++ iaqV++A+lk
  KHJ35357.1 211 GRPFEEIFQCFDEKPLGVGAIAQVYKARLK 240
                 6899*************************8 PP

  == domain 2  score: 47.0 bits;  conditional E-value: 2.8e-16
        ABC1  36 eeVavKvqrpgvkkriksDlellkllakllkkflkelrldleelvdefskslleEldferEAknaekfrenfaklkevkvPk 117
                 ++Va+Kv +pgv++ +++Dl+++ ++akll+ ++    l+l   v++f + ++ +ld++ EA n   fr++f++ ++v +P 
  KHJ35357.1 278 SHVAIKVLHPGVERVVQRDLKIMWFFAKLLNAIPTIEWLSLPDEVQQFGEMMRLQLDLRIEATNLTIFRKKFKDRTTVWFPY 359
                 68**************************99999888889************************************9998885 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.4e-05      0.21     166     184 ..     410     431 ..     323     444 .. 0.77

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.4e-05
                 EEEE-SS-SGGGEEEC.....T CS
         APH 166 tvllHgDlhpgNllvd...pdd 184
                   ++H DlhpgN++v+   +d+
  KHJ35357.1 410 DNFVHADLHPGNIMVRfyeKDK 431
                 569************9765444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (668 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       521  (0.0290591); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.62u 0.23s 00:00:00.85 Elapsed: 00:00:00.39
# Mc/sec: 5108.10
//
Query:       KHJ35358.1  [L=263]
Description: hypothetical protein EV44_g0473 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (263 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       366  (0.0204139); expected 358.6 (0.02)
Passed bias filter:                      257  (0.0143343); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 2125.34
//
Query:       KHJ35359.1  [L=306]
Description: putative mitochondrial oxaloacetate transport protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-55  184.6   2.7    2.4e-18   65.9   0.2    3.0  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   0.2   1.3e-22   2.4e-18       7      92 ..       6      95 ..       2      99 .. 0.93
   2 !   58.9   0.2   1.9e-20   3.4e-16       4      96 ..     108     203 ..     105     204 .. 0.87
   3 !   58.8   0.0   2.1e-20   3.8e-16       5      95 ..     210     296 ..     207     298 .. 0.93

  Alignments for each domain:
  == domain 1  score: 65.9 bits;  conditional E-value: 1.3e-22
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS....HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr  7 kellaGglagavatlvttPldvvKtrlqtqkksskksksaa....ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrl 92
                  ++aGg+a+++a+++t+P+++vK+r+q+q++ ++k+ + +     l+ +k i+++eGl g yrG++ + l +++ +++++++ye ++r 
  KHJ35359.1  6 GAFIAGGIAACGAVTMTHPFETVKIRMQLQGELKQKKAHLRvylgPLHGVKVIVRNEGLQGIYRGIGGAYLYQMILNGCRLSFYEPIRRQ 95
                679******************************999776669*******************************************99886 PP

  == domain 2  score: 58.9 bits;  conditional E-value: 1.9e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH....CCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCTT CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqt....qkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllkk 96 
                 s+  +++aG+++g++++ +  P+ ++Ktrlq+     +  + + k+++++d l+++y  eG+ g yrG+++++lr++  s++++ +y + kr l k+
  KHJ35359.1 108 SLPVNIFAGSISGVMGAAAGSPFFLIKTRLQSfslfTPVGT-QHKYRNTIDGLRQVYFAEGIYGIYRGVNAAMLRTSFGSSVQLPTYFFAKRRLVKH 203
                 677899**************************777633333.333444********************************************99885 PP

  == domain 3  score: 58.8 bits;  conditional E-value: 2.1e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   5 vlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 ++ +l+++g++g+v  +v++P+d+v  r+ +q+++    +   ++d++ ki+k+eG+ ++y+G+lp l+r+ p + l+++l e++ +l+ k
  KHJ35359.1 210 PTLHLISSGISGSVVCCVMHPTDTVLSRMYNQNGNLYR-G---VWDCVVKILKTEGFWAMYKGFLPHLTRILPHTILTLSLAEQTNDLMRK 296
                 6679*****************************99654.3...*******************************************99876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (306 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       410  (0.022868); expected 358.6 (0.02)
Passed bias filter:                      364  (0.0203023); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.45u 0.26s 00:00:00.71 Elapsed: 00:00:00.41
# Mc/sec: 2218.38
//
Query:       KHJ35360.1  [L=536]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      7e-75  252.0  14.6    9.1e-75  251.6  14.6    1.1  1  Lung_7-TM_R  Lung seven transmembrane receptor


Domain annotation for each model (and alignments):
>> Lung_7-TM_R  Lung seven transmembrane receptor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  251.6  14.6   5.1e-79   9.1e-75       1     295 []     144     435 ..     144     435 .. 0.96

  Alignments for each domain:
  == domain 1  score: 251.6 bits;  conditional E-value: 5.1e-79
  Lung_7-TM_R   1 ikktGlYclifskcdeklsksksslklkvkvnwknpegyLsaseapllklylimalayvllgilWlfilakykkdilkiqkliaavivlkmlelafvy 98 
                  ikktG+Yc+ +         +  +l + ++v ++n++g+L++s++ +l++y+ +++ayv++g++W f+++++++dil++q++i+a+i++ ++e+++++
   KHJ35360.1 144 IKKTGYYCVGATA------FQPRDLIFGATVDFRNAYGQLPGSQIAKLPFYGGITIAYVVVGAFWAFLYVQHRHDILPVQNYITAIIIFLIVEMLMTW 235
                  79********884......4667899************************************************************************ PP

  Lung_7-TM_R  99 ieYatinskGss..ievlavlasilsalkktlsrlliliislGygivkpkLgdllkkvlllglllfvlaevlelvresseesessakllkvllflipl 194
                    Y+++n +Gss  ++vl+v++ il+a ++++s++l+li+++Gyg+vk +Lg+++  v  l+++ f+++ +  ++   s +++ ++    vll+++pl
   KHJ35360.1 236 GFYDYMNRTGSSigSKVLMVIVAILNAGRNSFSFFLLLIVCMGYGVVKESLGKTMVYVRWLAGAHFFFSLIYAVI---SLTIAPENAGPLVLLIILPL 330
                  ************999******************************************************776555...466666667889******** PP

  Lung_7-TM_R 195 alldlffvvwifrsLqktlrdlklkrnlvklklYrkftvvlvisvvasviivlvekill...ktvdsvekqWkeeWlitafw.elltlvllvviaylw 288
                  a++ ++f+vw++ sL+ t+rdl  +++ vk+ +Yr+++ +++ s+++++ + +++++++      d v+++Wk++W+i + w +l++++  + iaylw
   KHJ35360.1 331 AGTLTMFYVWTLNSLNYTMRDLAHRKQNVKALMYRRLWWAILGSIIVIFGFFFFNSFTFasrGDPDFVPFHWKTRWFILDGWlNLVYFADVIFIAYLW 428
                  **********************************************************99888899******************************** PP

  Lung_7-TM_R 289 rPsqnnq 295
                  rP++nn+
   KHJ35360.1 429 RPTENNR 435
                  *****95 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (536 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       987  (0.0550505); expected 358.6 (0.02)
Passed bias filter:                      461  (0.0257125); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.29s 00:00:00.88 Elapsed: 00:00:00.47
# Mc/sec: 3445.11
//
Query:       KHJ35361.1  [L=388]
Description: putative wd repeat-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-17   63.5   2.9    3.7e-08   33.9   0.0    5.2  6  WD40         WD domain, G-beta repeat
    1.9e-05   24.8   0.0        1.1    9.6   0.0    4.5  5  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.9   0.0   0.00033         3       4      38 .]      41      88 ..      38      88 .. 0.77
   2 !   33.9   0.0   4.1e-12   3.7e-08       4      38 .]     139     174 ..     136     174 .. 0.94
   3 ?   -1.0   0.0      0.43   3.9e+03      17      29 ..     193     205 ..     190     215 .. 0.79
   4 ?   -1.6   0.0      0.69   6.2e+03      15      29 ..     247     263 ..     240     277 .. 0.64
   5 !   16.2   0.0   1.6e-06     0.015      15      38 .]     314     337 ..     296     337 .. 0.93
   6 ?   -1.7   0.0      0.75   6.8e+03      16      37 ..     362     381 ..     354     382 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 0.00033
                EEEEE...SS.SS.........EEEEEEETTSSEEEEE.ETTSEEEEEE CS
        WD40  4 lrtlt...GH.ss.........vtslafspdgawlasG.sdDgtvriWd 38
                +++++   GH ++         + sl+f+++g +l+++ s D +  i++
  KHJ35361.1 41 TKHFSrepGHhGPrsqvssptsILSLDFDDEGGLLLTSeS-DSSMQIYN 88
                566655557755567777788899*************977.*9999886 PP

  == domain 2  score: 33.9 bits;  conditional E-value: 4.1e-12
                 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 lr ++GH ++vt+l+++p ++ ++s+s+D+t+r+Wd
  KHJ35361.1 139 LRYFEGHeKNVTCLSNHPGQDNFLSCSEDNTLRVWD 174
                 67799**999*************************9 PP

  == domain 3  score: -1.0 bits;  conditional E-value: 0.43
                 EEETTSSEEEEEE CS
        WD40  17 afspdgawlasGs 29 
                 a++p+g+ +a +s
  KHJ35361.1 193 AWDPSGNVFAVAS 205
                 599**99988665 PP

  == domain 4  score: -1.6 bits;  conditional E-value: 0.69
                 EEEEETTSSEEE..EEE CS
        WD40  15 slafspdgawla..sGs 29 
                  l fs dg+ l+  + +
  KHJ35361.1 247 KLEFSNDGKSLLlgTTG 263
                 56789999887534333 PP

  == domain 5  score: 16.2 bits;  conditional E-value: 1.6e-06
                 EEEEETTSSEEEEEETTSEEEEEE CS
        WD40  15 slafspdgawlasGsdDgtvriWd 38 
                 +++f pdg++++sGs+ ++v iWd
  KHJ35361.1 314 DVCFTPDGRYVMSGSRTRNVFIWD 337
                 799********************9 PP

  == domain 6  score: -1.7 bits;  conditional E-value: 0.75
                 EEEETTSSEEEEEETTSEEEEE CS
        WD40  16 lafspdgawlasGsdDgtvriW 37 
                 +af+p  +++a+   D+ + +W
  KHJ35361.1 362 VAFNPRFHFFAT-A-DKELIFW 381
                 456777778765.5.8888888 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0   0.00012       1.1      39      76 ..      61      98 ..      51     155 .. 0.89
   2 ?    1.9   0.0      0.03   2.7e+02      36      72 ..     144     180 ..     138     186 .. 0.85
   3 !    4.5   0.0    0.0048        43      25      66 ..     168     215 ..     158     222 .. 0.67
   4 ?    2.6   0.0     0.018   1.6e+02      40      71 ..     244     275 ..     236     285 .. 0.84
   5 ?   -2.8   0.0      0.92   8.2e+03      44      66 ..     315     337 ..     313     344 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00012
  ANAPC4_WD40 39 sevrsLaWkpdgklLavaysdgevrlldaesgkvvhsl 76
                  ++ sL +  +g lL  + sd++++++++ +gk  ++l
   KHJ35361.1 61 TSILSLDFDDEGGLLLTSESDSSMQIYNVREGKHQKTL 98
                 57899***************************987766 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.03
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkv 72 
                  +++++v++L+ +p    +    +d+++r+ da s+++
   KHJ35361.1 144 GHEKNVTCLSNHPGQDNFLSCSEDNTLRVWDAGSKNC 180
                  5788999**99999999999999*******9998876 PP

  == domain 3  score: 4.5 bits;  conditional E-value: 0.0048
  ANAPC4_WD40  25 ngqrvwtleedkedsevrsL.....aWkpdgklLavay.sdgevrlld 66 
                  n  rvw++ +++ +++ + L     aW p+g+++ava    +++ l+d
   KHJ35361.1 168 NTLRVWDAGSKNCSGKLNLLgaylaAWDPSGNVFAVASpIANTILLYD 215
                  66788888666666666544333348**********962356666666 PP

  == domain 4  score: 2.6 bits;  conditional E-value: 0.018
  ANAPC4_WD40  40 evrsLaWkpdgklLavaysdgevrlldaesgk 71 
                  + ++L++++dgk L  ++   +  llda +g 
   KHJ35361.1 244 KWNKLEFSNDGKSLLLGTTGKNHLLLDAFDGS 275
                  5679*************998888888888776 PP

  == domain 5  score: -2.8 bits;  conditional E-value: 0.92
  ANAPC4_WD40  44 LaWkpdgklLavaysdgevrlld 66 
                  +++ pdg+  + +    +v + d
   KHJ35361.1 315 VCFTPDGRYVMSGSRTRNVFIWD 337
                  78999999999998888877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (388 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       328  (0.0182944); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2829.55
//
Query:       KHJ35362.1  [L=325]
Description: putative cytoplasmic trna 2-thiolation protein 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-11   43.0   1.4    1.8e-10   41.1   1.4    1.9  1  CTU2        Cytoplasmic tRNA 2-thiolation protein 2
  ------ inclusion threshold ------
      0.062   13.0   0.0        5.2    6.8   0.0    2.4  2  ATP_bind_3  PP-loop family


Domain annotation for each model (and alignments):
>> CTU2  Cytoplasmic tRNA 2-thiolation protein 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   1.4     2e-14   1.8e-10       1      58 [.     238     289 ..     238     321 .. 0.83

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 2e-14
        CTU2   1 sIqrLtekFilklekdfpstvstvvrTgeKLvknksseeaeletsekCalCglplddk 58 
                 +I++L+ +++++ e+d+p +v++vvrT++KL+ ++++      t+++C +Cg+p+  +
  KHJ35362.1 238 TINDLMLQYFQSSEEDYPGIVANVVRTASKLSVASDN------TKNCCGICGIPCCLN 289
                 79********************************986......99********99333 PP

>> ATP_bind_3  PP-loop family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.8   0.0   0.00058       5.2       3      57 ..      18      80 ..      16     103 .. 0.75
   2 ?    3.9   0.0    0.0046        41      90     156 ..     146     212 ..     141     216 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.00058
                EEE--SCHHHHHHHHHHHHHCTTTTT.......EEEEEEEE-SSS.TCHHHHHHHHHHHHHHT CS
  ATP_bind_3  3 lvAvSgGlDSmaLllllaklkkklgi.......klvaihvdhglr.eeskeeaelvkelckkl 57
                l  +S G+ S  Ll++l  + + ++        +lv++h+d  +  e  +  a+ ++++ +++
  KHJ35362.1 18 LFPLSYGPSSSSLLHILDGHLQGQYErmkkvayELVVVHIDLYVTeEDREFSARKLEQFKAQY 80
                5668************998866555567788999*******7777245555666777666665 PP

  == domain 2  score: 3.9 bits;  conditional E-value: 0.0046
                 HCHHCCT.CEEE---BHHHHHHHHHHHHCCT--CCHHH-S-SEEEETTCCEE-CCCT--HHHHHHHH CS
  ATP_bind_3  90 ealkkegievlllAhhadDqaEtfllrlargsglaglagikeaseiasirlvRPlLkvskeeleeyl 156
                 ++  +++++++l +      aE  l + a+g+g+a  + i  + + ++i +  P+ ++ k+e+ +y+
  KHJ35362.1 146 RIGINNSCSCILFGDSTTKLAEKTLTETAKGRGIALPWQICDEASAYGIGFNYPMRDLLKKEIVKYV 212
                 6667888999******************************99999*******************997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (325 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.26s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2370.40
//
Query:       KHJ35363.1  [L=247]
Description: putative duf498 domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.6e-28   96.4   0.0    1.6e-27   95.7   0.0    1.4  1  DUF498    Protein of unknown function (DUF498/DUF598)


Domain annotation for each model (and alignments):
>> DUF498  Protein of unknown function (DUF498/DUF598)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.7   0.0   9.1e-32   1.6e-27       1     109 []     110     237 ..     110     237 .. 0.86

  Alignments for each domain:
  == domain 1  score: 95.7 bits;  conditional E-value: 9.1e-32
                 EEEEESSEEEE.TTEE...ESSEEEE-SSSEEE-T.............HCS.TTCEECHHHHHHCT..T..SEEEEE-TTS-----HHHHHHHHCCTSE CS
      DUF498   1 idaygeggfel.ngvk...ysgsllvlpeeafawd.............vak.aedlteeslellellepkpellilGtGkrqlplspevrealnelgig 81 
                 ida+ ++gf+l +g k   + g llv+ ++af+w+             ++k   ++++e ++ +e+ +p+p+llilG+Gk+++pls ++ ++++ lgi+
  KHJ35363.1 110 IDACLWDGFHLnSGIKitgGMGVLLVG-GKAFSWQpwiarkdnlkkllNEKgQWEVEDETWGIFETTWPRPDLLILGLGKEMRPLSSKTSKKIHGLGIR 207
                 89*********8888844445556666.99****55577777777766333355566****************************************** PP

                 EEEE-HHHHHHHHHHHHHHT..--EEEEEE CS
      DUF498  82 vevmdtraAartyNllaaeg..rrVaaaLi 109
                 +e++dtr+Aa+++Nlla+e+  +++aaaLi
  KHJ35363.1 208 LEIQDTRNAAAQFNLLATERgiQNIAAALI 237
                 ****************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (247 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       417  (0.0232584); expected 358.6 (0.02)
Passed bias filter:                      366  (0.0204139); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1934.40
//
Query:       KHJ35364.1  [L=264]
Description: putative ribosomal protein l32 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-10   39.9   9.2    3.1e-10   39.9   9.2    2.2  2  Sec2p           GDP/GTP exchange factor Sec2p
    0.00073   19.0   7.1    0.00073   19.0   7.1    1.8  2  Cluap1          Clusterin-associated protein-1
    0.00084   18.6  12.3     0.0014   17.9  12.4    1.3  1  Tmemb_cc2       Predicted transmembrane and coiled-coil 2 pro
     0.0044   17.3  18.2       0.11   12.7  14.3    2.2  2  ATG16           Autophagy protein 16 (ATG16)
      0.005   15.2  10.6     0.0066   14.8  10.6    1.1  1  RAP1            Rhoptry-associated protein 1 (RAP-1)
      0.005   16.2  15.3       0.12   11.7   0.0    2.1  2  Tropomyosin     Tropomyosin
     0.0085   16.3  15.5       0.11   12.7  11.8    2.2  2  Jnk-SapK_ap_N   JNK_SAPK-associated protein-1
  ------ inclusion threshold ------
      0.018   14.5   8.6       0.02   14.4   8.6    1.2  1  Mcm10           Mcm10 replication factor
      0.094   12.7   8.6       0.33   11.0   0.2    2.6  3  Noelin-1        Neurogenesis glycoprotein
       0.22   10.4  15.2       0.62    8.9  11.0    2.0  2  Spc7            Spc7 kinetochore protein
       0.29   11.6   2.3        0.4   11.1   0.1    2.3  3  FAA_hydro_N_2   Fumarylacetoacetase N-terminal domain 2
       0.32   11.3  14.8       0.33   11.3   8.0    2.2  2  YlqD            YlqD protein
       0.36   10.8  12.3       0.16   12.0   9.4    1.8  2  Stathmin        Stathmin family
       0.42   10.3   4.4       0.71    9.5   3.2    2.0  2  Vac_Fusion      Chordopoxvirus multifunctional envelope prote
       0.42   10.3  12.1       0.49   10.1  12.1    1.2  1  PAP1            Transcription factor PAP1
       0.52    8.9  10.0        0.6    8.7  10.0    1.1  1  Ndc1_Nup        Nucleoporin protein Ndc1-Nup
       0.54   10.4   9.4       0.74    9.9   0.1    2.5  2  DUF848          Gammaherpesvirus protein of unknown function 
       0.63    8.9   8.1       0.77    8.7   8.1    1.1  1  Miga            Mitoguardin
       0.65   10.7   7.6        6.5    7.5   0.0    2.4  2  YabA            Initiation control protein YabA
       0.67   10.7  16.3        1.2    9.9  13.2    2.2  2  NAM-associated  No apical meristem-associated C-terminal doma
       0.82   10.3  18.1        5.1    7.8   6.4    3.9  3  SlyX            SlyX
        1.1    9.4  14.7         13    5.8  10.7    2.1  2  Mod_r           Modifier of rudimentary (Mod(r)) protein
        1.3    9.3  18.4          2    8.7  18.4    1.4  1  DUF737          Protein of unknown function (DUF737)
        2.1    7.6  10.2          1    8.6   7.1    1.7  2  FAM76           FAM76 protein
        3.2    8.4  17.7        2.4    8.8   3.4    3.4  4  BST2            Bone marrow stromal antigen 2
        3.4    7.2  13.9         17    4.8  13.9    1.9  1  Exonuc_VII_L    Exonuclease VII, large subunit
        5.5    5.5   8.8        2.8    6.4   6.6    1.5  2  FapA            Flagellar Assembly Protein A
        5.8    6.4  13.1        8.9    5.8  13.1    1.3  1  SMYLE_N         Short myomegalin-like EB1 binding proteins, N
        6.8    5.1  21.3        7.7    4.9  19.8    1.4  1  Macoilin        Macoilin family
        9.8    6.4   7.9        1.4    9.0   2.2    2.5  3  POTRA_TamA_1    POTRA domain TamA domain 1


Domain annotation for each model (and alignments):
>> Sec2p  GDP/GTP exchange factor Sec2p
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.2   0.1      0.62   3.7e+02      38      61 ..      50      73 ..      28      82 .. 0.63
   2 !   39.9   9.2   5.2e-13   3.1e-10       2      78 ..     173     249 ..     172     261 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.2 bits;  conditional E-value: 0.62
                HHHHHHHHHHHHHHHHHHHHHHTT CS
       Sec2p 38 VaaarkekealekkneklkeqLke 61
                V++a  + +++e + + l++qLk+
  KHJ35364.1 50 VIDAVDKWADYEDQIRALRTQLKQ 73
                555555556666666666666654 PP

  == domain 2  score: 39.9 bits;  conditional E-value: 5.2e-13
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHCHCCCHCTSSSSHHHH CS
       Sec2p   2 lkeekkkreeaekekkklekEledLtasLFeeANkmVaaarkekealekkneklkeqLkeketlleslqeqLkeLke 78 
                 l+ ek+ r++ae + ++  +E+e+L+a+LF +AN+mVa +r+ +++le + e l+++ +ek++ le l++  +   +
  KHJ35364.1 173 LTREKTLRQAAEGKLSETSEEIEELSAQLFMQANEMVAVERRMRANLESRLEILEKRDQEKKQRLERLENAIQRIER 249
                 67899*************************************************************99988776655 PP

>> Cluap1  Clusterin-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.2         1     6e+02     173     209 ..      35      71 ..      22      84 .. 0.34
   2 !   19.0   7.1   1.2e-06   0.00073     112     223 ..     142     251 ..     112     252 .. 0.78

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 1
      Cluap1 173 aikkvkeelektkkalenlesdeanLeakiekkkqel 209
                 +i+++ ++++ +++++ +  +  a  e++i+  +++l
  KHJ35364.1  35 QIEDLGSQVQILTARVIDAVDKWADYEDQIRALRTQL 71 
                 3333333333322222222222222222222222222 PP

  == domain 2  score: 19.0 bits;  conditional E-value: 1.2e-06
      Cluap1 112 eldlssklsdlkaarqlaseitekgasLydlLekevelreartkalsrqleleeiekalkeaikkvkeelektkkalenlesdeanLeakiekkkqele 210
                 + +ls   s   ++ + + + t++ ++L ++L +e++lr+a + +ls++ e  eie+  ++   +++e ++  +++ +nles  + Le++ + kkq le
  KHJ35364.1 142 SSSLSPSSSSSSSSSSSSLSTTTSNTELTEALTREKTLRQAAEGKLSETSE--EIEELSAQLFMQANEMVAVERRMRANLESRLEILEKRDQEKKQRLE 238
                 55555555555566666667789999*****************99997764..7777666677777777888888889********************* PP

      Cluap1 211 raqkrLqslqsvr 223
                 r ++ +q +++vr
  KHJ35364.1 239 RLENAIQRIERVR 251
                 **********998 PP

>> Tmemb_cc2  Predicted transmembrane and coiled-coil 2 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9  12.4   2.4e-06    0.0014     140     273 ..     102     244 ..      30     248 .. 0.65

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 2.4e-06
   Tmemb_cc2 140 kfGSADninslksseees...eeesgskslssstallvskskytsddesssssvesssadsnsnseestasa..sksaesesqeklekileelqeikee 233
                  fGS  n ++++ +e++    ++ s ++ +sss++++ s s+  s  +sssss +sss +++++++e t++   +k+ ++ ++ kl++  ee++e+ ++
  KHJ35364.1 102 FFGSGRNASQSSPTEKTPvasSSLSPTSPTSSSSSSSLSPSSSLSPSSSSSSSSSSSSLSTTTSNTELTEALtrEKTLRQAAEGKLSETSEEIEELSAQ 200
                 59********996666655542222222233333333333334444444444433444444444444333335578889999999**********9999 PP

   Tmemb_cc2 234 qerleeelerlkeqlkkel....kllkqaLqeeryryerLEeql 273
                     ++e+ +++++++ +l    ++l++  qe + r erLE+ +
  KHJ35364.1 201 LFMQANEMVAVERRMRANLesrlEILEKRDQEKKQRLERLENAI 244
                 9888888877777776666444488888889**********976 PP

>> ATG16  Autophagy protein 16 (ATG16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.1   0.1     0.019        12     100     145 ..      32      77 ..      25      88 .. 0.87
   2 !   12.7  14.3   0.00018      0.11      39     161 ..     116     245 ..     106     257 .. 0.64

  Alignments for each domain:
  == domain 1  score: 6.1 bits;  conditional E-value: 0.019
       ATG16 100 laqrllelneelqkleeklkedeerlaeleaeraaletklkdreee 145
                 + q++ +l +++q l ++      + a+ e++++al+t+lk+r ++
  KHJ35364.1  32 MHQQIEDLGSQVQILTARVIDAVDKWADYEDQIRALRTQLKQRVQT 77 
                 7899999999999999999999999999999999999999999876 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00018
       ATG16  39 aklekaaasaks..sksskksakekeasasq..snskqsakiqsleqklaqlreelaelyksrgelaq....rllelneelqkleeklkedeerlaele 129
                 +k + a++s ++  +   ++s++++++ +s+   +s++s++++s++  +++ ++el+e++ +  +l q    +l e++ee+++l ++l  +++++ ++e
  KHJ35364.1 116 EKTPVASSSLSPtsP--TSSSSSSSLSPSSSlsPSSSSSSSSSSSSLSTTTSNTELTEALTREKTLRQaaegKLSETSEEIEELSAQLFMQANEMVAVE 212
                 333333333333321..2222222222222244333444444555555566678888888887777664444899*********999877777776665 PP

       ATG16 130 .aeraaletklkdreeelrekeklvqdlqDEls 161
                  ++ra+le +l+ +e++ +ek++ ++ l  +++
  KHJ35364.1 213 rRMRANLESRLEILEKRDQEKKQRLERLENAIQ 245
                 167899***************999999877665 PP

>> RAP1  Rhoptry-associated protein 1 (RAP-1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8  10.6   1.1e-05    0.0066     133     267 ..     111     242 ..      99     250 .. 0.63

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.1e-05
        RAP1 133 kpkststeslksssdskskasaksnvksaskyGesssseesatdsskasasvagivGadeeeppapkntltpleelyet.nvnlfalkysleklekeid 230
                 + + t+    +sss s ++ ++ s++ s s    ss s  s+  ss++s+s++      e       ++lt  + l ++ + +l +    +e+l  ++ 
  KHJ35364.1 111 QSSPTEKTPVASSSLSPTSPTSSSSSSSLS--PSSSLSPSSSSSSSSSSSSLSTTTSNTELT-----EALTREKTLRQAaEGKLSETSEEIEELSAQLF 202
                 333344444555555554444444444444..456667667777777777777766666665.....44555444444313567788889999999999 PP

        RAP1 231 ilkneydkvkeke..eee.ydeieekakeekkkalekvek 267
                 +  ne   v+++   + e   ei ek+ +ekk+ le++e 
  KHJ35364.1 203 MQANEMVAVERRMraNLEsRLEILEKRDQEKKQRLERLEN 242
                 9999999888876554441559999999999999998775 PP

>> Tropomyosin  Tropomyosin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.7   0.0    0.0002      0.12     149     190 ..      35      76 ..      27      80 .. 0.87
   2 ?    5.0  12.7     0.022        13      11      87 ..     181     258 ..     170     261 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.0002
  Tropomyosin 149 eLkvvgnnlksLevseekaseredeyeeeirtLeekLkeaee 190
                  +++  g +++ L +    a+++  +ye++ir L ++Lk+ ++
   KHJ35364.1  35 QIEDLGSQVQILTARVIDAVDKWADYEDQIRALRTQLKQRVQ 76 
                  56667889999***************************9765 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.022
  Tropomyosin  11 deaeerlekakkkleeaekkaekaeaEvaalnrriq.lleeelerteerleealekLeeaekaadeserarKvlEnre 87 
                  + ae +l ++ +++ee  ++   + +E  a++rr++ +le+ le  e+r +e++++Le +e a +  er+r  l +r+
   KHJ35364.1 181 QAAEGKLSETSEEIEELSAQLFMQANEMVAVERRMRaNLESRLEILEKRDQEKKQRLERLENAIQRIERVRGLLSSRS 258
                  5678899999********99999999*999*99997479************************999999999888876 PP

>> Jnk-SapK_ap_N  JNK_SAPK-associated protein-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1     0.037        22      57     102 ..      34      79 ..      23      86 .. 0.66
   2 !   12.7  11.8   0.00018      0.11      56     139 ..     163     246 ..     148     260 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.037
  Jnk-SapK_ap_N  57 eeleqLeteyerekelrkraeeeleeiedqweeerkelqekveqle 102
                    +++e+L ++ +  ++   +a +++  +edq++  r +l+++v+ ++
     KHJ35364.1  34 QQIEDLGSQVQILTARVIDAVDKWADYEDQIRALRTQLKQRVQTTQ 79 
                    4556666666666666666666666777777777777777666654 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 0.00018
  Jnk-SapK_ap_N  56 reeleqLeteyerekelrkraeeeleeiedqweeerkelqekveqleeenrelelkaknaadqlsrleekeaelkkeysklhe...r 139
                       +++L++ ++rek lr++ae +l e+ +++ee   +l  + +++   +r++     n++ +l+ le++++e k++ ++l++   r
     KHJ35364.1 163 TTSNTELTEALTREKTLRQAAEGKLSETSEEIEELSAQLFMQANEMVAVERRMR---ANLESRLEILEKRDQEKKQRLERLENaiqR 246
                    567999************************************************...9****************9999998874441 PP

>> Mcm10  Mcm10 replication factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   8.6   3.3e-05      0.02      71     222 ..     112     262 ..      25     264 .] 0.75

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 3.3e-05
       Mcm10  71 vkssstskekksalkskksasevpkassslaasklPkLgrgfsegedvlfldtspptaskssasaeaaklaAiaklkakgkvikkedpnavkrKrsdss 169
                 +++++++  ++s+l+  +++s+ + +s s+++s  P+ +  +s++   l ++ts+ + ++  + +++ ++aA  kl +  + i++   +   + +++  
  KHJ35364.1 112 SSPTEKTPVASSSLSPTSPTSSSSSSSLSPSSSLSPSSSSSSSSSSSSLSTTTSNTELTEALTREKTLRQAAEGKLSETSEEIEELSAQLFMQ-ANEMV 209
                 222222222333333333333333333566666677777777777766777777777778888888888999999999888666665555444.66777 PP

       Mcm10 170 kvserveknlksseetkaeseeepaakkkreqlaylkseefqkiLnakSkhtk 222
                  v++r++ nl+s  e  +++++e +++ +r ++a  ++e ++ +L  +Sk ++
  KHJ35364.1 210 AVERRMRANLESRLEILEKRDQEKKQRLERLENAIQRIERVRGLLSSRSKIKA 262
                 *************************************************9876 PP

>> Noelin-1  Neurogenesis glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.2   0.00055      0.33      44      94 ..      32      82 ..      22      87 .. 0.90
   2 ?    4.2   2.7     0.071        43      28      96 ..     166     236 ..     148     241 .. 0.76
   3 ?    4.3   1.0     0.065        39      49      80 ..     217     248 ..     203     260 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00055
    Noelin-1 44 llekvqnlsqsievldlRtsrdlqyvrktetllktlesklkvveedrkels 94
                + +++++l  ++++l+ R   +++   + e +++ l+++lk+  + ++   
  KHJ35364.1 32 MHQQIEDLGSQVQILTARVIDAVDKWADYEDQIRALRTQLKQRVQTTQVVD 82
                678999***********************************9998887655 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.071
    Noelin-1  28 aqdvCsrDarsrqlrqlle.kvqnlsqsievldlRtsrdlqyvrktetllk.tlesklkvveedrkelsak 96 
                 + ++ +  +r++ lrq  e k    s++ie l+     + +++  +e  ++ +les+l+ +e+  +e++++
  KHJ35364.1 166 NTELTEALTREKTLRQAAEgKLSETSEEIEELSAQLFMQANEMVAVERRMRaNLESRLEILEKRDQEKKQR 236
                 555666668999999987658999*******9999888888877777777538******999988887765 PP

  == domain 3  score: 4.3 bits;  conditional E-value: 0.065
    Noelin-1  49 qnlsqsievldlRtsrdlqyvrktetllktle 80 
                 +nl   +e+l++R ++  q +++ e+ ++ +e
  KHJ35364.1 217 ANLESRLEILEKRDQEKKQRLERLENAIQRIE 248
                 68999999999999999999999999998876 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.6   0.1     0.044        26     210     263 ..      27      76 ..      22      86 .. 0.68
   2 ?    8.9  11.0     0.001      0.62     177     257 ..     167     251 ..     155     260 .. 0.77

  Alignments for each domain:
  == domain 1  score: 3.6 bits;  conditional E-value: 0.044
        Spc7 210 elkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgw 263
                 ++ ++++   +++++l +q++ l++++ ++ ++ +++e++i++ +  l+ ++  
  KHJ35364.1  27 SIGVKMH---QQIEDLGSQVQILTARVIDAVDKWADYEDQIRALRTQLK-QRVQ 76 
                 5555555...788888888888888888888888888888885554444.3333 PP

  == domain 2  score: 8.9 bits;  conditional E-value: 0.001
        Spc7 177 aeleeeleklqe...aaeelesidkeeLeelreelaelkae.ieekkkelaelqeqleeleekieelkeqkseleeeiaeaervl 257
                 +el+e l+++++   aae   s ++ee+eel  +l  + +e ++  +++ a+l+++le le++ +e k++ ++le++i++ erv+
  KHJ35364.1 167 TELTEALTREKTlrqAAEGKLSETSEEIEELSAQLFMQANEmVAVERRMRANLESRLEILEKRDQEKKQRLERLENAIQRIERVR 251
                 445555554444221555555567*********997666651577788999******************************9997 PP

>> FAA_hydro_N_2  Fumarylacetoacetase N-terminal domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   0.00068       0.4      28      67 ..      43      81 ..      33      87 .. 0.81
   2 ?   -1.9   0.1       7.6   4.6e+03      43      56 ..     188     201 ..     164     219 .. 0.57
   3 ?   -1.5   0.1       6.1   3.6e+03      46      67 ..     216     237 ..     201     248 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00068
  FAA_hydro_N_2 28 aseiaptlqaaLdnWdevepaLeelyeaLnagtakeafaf 67
                   ++ + +   +a+d+W++ e ++++l ++L+++  ++++ +
     KHJ35364.1 43 VQILTARVIDAVDKWADYEDQIRALRTQLKQRV-QTTQVV 81
                   4556678899*******************9887.445544 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 7.6
  FAA_hydro_N_2  43 devepaLeelyeaL 56 
                    +e+++++eel+++L
     KHJ35364.1 188 SETSEEIEELSAQL 201
                    33444444444444 PP

  == domain 3  score: -1.5 bits;  conditional E-value: 6.1
  FAA_hydro_N_2  46 epaLeelyeaLnagtakeafaf 67 
                    +++Le++ e L+++++++++++
     KHJ35364.1 216 RANLESRLEILEKRDQEKKQRL 237
                    4556666666666665555544 PP

>> YlqD  YlqD protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.2   0.5      0.09        54      24      71 ..      31      77 ..      26      88 .. 0.73
   2 ?   11.3   8.0   0.00055      0.33      16      89 ..     178     253 ..     165     261 .. 0.88

  Alignments for each domain:
  == domain 1  score: 4.2 bits;  conditional E-value: 0.09
        YlqD 24 qlqaqieqldkelqqLefqakrlikeikkqsaqqieeiqeqvekekse 71
                ++++qie l +++q L+     ++++ +   ++qi+++++q++++ + 
  KHJ35364.1 31 KMHQQIEDLGSQVQILTARVIDAVDKWAD-YEDQIRALRTQLKQRVQT 77
                56777777777777777777777777766.444888888888888765 PP

  == domain 2  score: 11.3 bits;  conditional E-value: 0.00055
        YlqD  16 klKeelqqqlqaqieqldkelqqLefqakrlikeikkqsaq..qieeiqeqvekekserlekkkqllqqleqvqkL 89 
                 +l++ ++ +l++  e++++  +qL +qa+++++  ++  a+  +  ei e+ ++ek++rle+ +++ q++e+v+ L
  KHJ35364.1 178 TLRQAAEGKLSETSEEIEELSAQLFMQANEMVAVERRMRANleSRLEILEKRDQEKKQRLERLENAIQRIERVRGL 253
                 578899999999999***99***********9988877666668889999**********************9876 PP

>> Stathmin  Stathmin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       3.9   2.4e+03     109     129 ..      61      81 ..      56      88 .. 0.76
   2 ?   12.0   9.4   0.00026      0.16      20     130 ..     139     251 ..     133     257 .. 0.74

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 3.9
    Stathmin 109 eaqlaalkekLkekekhveev 129
                 e q+ al+++Lk++ +  + v
  KHJ35364.1  61 EDQIRALRTQLKQRVQTTQVV 81 
                 678899999999988877666 PP

  == domain 2  score: 12.0 bits;  conditional E-value: 0.00026
    Stathmin  20 LkppskesvpekllssPkkkdlsleeiqkKLeaAEeRRksleaqklkqlaekrekeeevlqKaaeennnfs...kaaeeklkqkmeaskenreaqlaal 115
                 L+p+s+ s ++  +ss + ++ls+   +  L +A  R k+l +    +l+e  e +ee++     + n+++   +  +++l++++e + e+r++  ++ 
  KHJ35364.1 139 LSPSSSLSPSSSSSSSSSSSSLSTTTSNTELTEALTREKTLRQAAEGKLSETSEEIEELSAQLFMQANEMVaveRRMRANLESRLE-ILEKRDQEKKQR 236
                 78888888666777778888888889**********************************88754444443011344556666663.455666666666 PP

    Stathmin 116 kekLkekekhveevr 130
                 +e+L +  + +e+vr
  KHJ35364.1 237 LERLENAIQRIERVR 251
                 777777777777776 PP

>> Vac_Fusion  Chordopoxvirus multifunctional envelope protein A27
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0         5     3e+03       3      31 ..      37      65 ..      35      71 .. 0.73
   2 ?    9.5   3.2    0.0012      0.71       4      35 ..     218     249 ..     215     251 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 5
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  Vac_Fusion  3 kdleerllvlekdfqlvikcckrvnealk 31
                +dl  ++  l+  + + ++++   +++++
  KHJ35364.1 37 EDLGSQVQILTARVIDAVDKWADYEDQIR 65
                66667777788888888888888887776 PP

  == domain 2  score: 9.5 bits;  conditional E-value: 0.0012
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH- CS
  Vac_Fusion   4 dleerllvlekdfqlvikcckrvnealkRlEn 35 
                 +le rl  lek  q+  ++  r ++a++R+E+
  KHJ35364.1 218 NLESRLEILEKRDQEKKQRLERLENAIQRIER 249
                 79*****************************8 PP

>> PAP1  Transcription factor PAP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.1  12.1   0.00081      0.49      60     164 ..      73     177 ..      40     241 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 0.00081
        PAP1  60 aststtssvesasasssesknqrsnslealtkednnnysnsaanegltrgstassaesqsstysansgtstssdSPsssseshqgqlS.ScgTSPEPst 157
                 +  +tt+ v+++ +s++ s  ++  +   ++++  n+ ++s +++ ++ +s+ s ++ +ss+ s +  + +ss SPssss+s+++ +S S+ TS   +t
  KHJ35364.1  73 QRVQTTQVVDPKPQSKRPSIVFGGYNFPLFFGSGRNASQSSPTEKTPVASSSLSPTSPTSSSSSSS-LSPSSSLSPSSSSSSSSSSSSlSTTTSNTELT 170
                 556677777788888888888888888888888888777666666665555555444444443333.44445678888887776643324455544444 PP

        PAP1 158 qSPaakk 164
                 +  + +k
  KHJ35364.1 171 EALTREK 177
                 4444444 PP

>> Ndc1_Nup  Nucleoporin protein Ndc1-Nup
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7  10.0     0.001       0.6     347     495 ..      72     222 ..      43     250 .. 0.41

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.001
    Ndc1_Nup 347 tqrinergq..papkaaps................kapknkasapvkelprlsksplkkkddeifgnsltaeaspkssssskegvekalsslakspgqs 427
                 +qr+++ +   p+p+++ +                                                 +++++sp  ++   ++  + +s++++s ++s
  KHJ35364.1  72 KQRVQTTQVvdPKPQSKRPsivfggynfplffgsgR--------------------------------NASQSSPTEKTPVASSSLSPTSPTSSSSSSS 138
                 333333333322222222244444444444443211................................1111111111111111111111112111111 PP

    Ndc1_Nup 428 psptarlsprarkllekaksrllskeqkealsestikkk................vekelaq.llkspligylFrqslrrrleal 495
                  sp+++lsp++ +  ++++s l + ++  +l+e+  ++k                +e+  aq +++    +++    +r+ le++
  KHJ35364.1 139 LSPSSSLSPSSSSSSSSSSSSLSTTTSNTELTEALTREKtlrqaaegklsetseeIEELSAQlFMQAN-EMVAVERRMRANLESR 222
                 33333333333333333333333322222222222222211111111122222225555555555533.4555555555555554 PP

>> DUF848  Gammaherpesvirus protein of unknown function (DUF848)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1    0.0012      0.74      63     119 ..      30      86 ..      21      92 .. 0.87
   2 ?    2.1   4.6      0.32   1.9e+02      57      99 ..     203     246 ..     179     252 .. 0.70

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0012
      DUF848  63 eavdteieakkkelslLkklnrkkvarveeLtdkvlelkeevsleldsleeaqeeyq 119
                 ++++++ie+   ++++L+++   +v++  +  d++  l+ ++++++++ +  ++++q
  KHJ35364.1  30 VKMHQQIEDLGSQVQILTARVIDAVDKWADYEDQIRALRTQLKQRVQTTQVVDPKPQ 86 
                 67899*****************************************99887777666 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.32
      DUF848  57 eikalveavdteie.akkkelslLkklnrkkvarveeLtdkvle 99 
                    + ++av++++  + +  l++L+k++++k +r+e L ++++ 
  KHJ35364.1 203 MQANEMVAVERRMRaNLESRLEILEKRDQEKKQRLERLENAIQR 246
                 34455666666665156778899999999999999999998875 PP

>> Miga  Mitoguardin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7   8.1    0.0013      0.77      68     212 ..     124     247 ..      63     260 .. 0.42

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0013
        Miga  68 sekksrssssksndtlslasskassssaklsgslqslasvksvnsssssaaansaswdkeeeeelklenitvltpenlylmG.melleealrrweqaLt 165
                 s + ++ +ss+s ++ls +ss ++sss++ s+s+ sl+ ++s +    + +                      ++      G +    e +++    L 
  KHJ35364.1 124 SLSPTSPTSSSSSSSLSPSSSLSPSSSSSSSSSSSSLSTTTSNTELTEALTR--------------------EKTLRQAAEGkLSETSEEIEELSAQLF 202
                 1222233333333344444444444333444444444433333222222222....................222222222201112222333333333 PP

        Miga 166 vrsrqaedeascssvklgagdaiaeeevedvksaefiekleslLera 212
                 ++ ++       +  +l++   ++ e+ +d ++++++e+le+ ++r 
  KHJ35364.1 203 MQANEMVAVERRMRANLES-RLEILEK-RDQEKKQRLERLENAIQRI 247
                 3333331111111111111.1111111.3444444444554444444 PP

>> YabA  Initiation control protein YabA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0     0.011       6.5      12      62 ..      31      81 ..      23      94 .. 0.82
   2 ?    2.3   6.2      0.43   2.6e+02      14      73 ..     184     244 ..     161     251 .. 0.60

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.011
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXXXXXXXXXX CS
        YabA 12 eleeqleelleeleelkeelaelleenaeLeleneklrerleeeekkekek 62
                ++++q+e+l ++++ l +++ + +++ a+ e + + lr++l+++ ++++  
  KHJ35364.1 31 KMHQQIEDLGSQVQILTARVIDAVDKWADYEDQIRALRTQLKQRVQTTQVV 81
                799************************999999999999996666555543 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.43
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHXXXXXXXXXXXXXXXXXXXXX CS
        YabA  14 eeqleelleeleelkeelaelleenaeLele...neklrerleeeekkekekkkelsegkenL 73 
                 e +l+e++ee+eel ++l   ++ n+ + +e     +l +rle  ek+++ekk++l++ ++ +
  KHJ35364.1 184 EGKLSETSEEIEELSAQLF--MQANEMVAVErrmRANLESRLEILEKRDQEKKQRLERLENAI 244
                 5567777778887777664..444555555532344566666444444444444444433333 PP

>> NAM-associated  No apical meristem-associated C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.82   4.9e+02      12      44 ..      51      83 ..      49      92 .. 0.64
   2 ?    9.9  13.2    0.0019       1.2      34     140 ..     125     237 ..     107     249 .. 0.57

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.82
  NAM-associated 12 LknepKWkdqydelkkkrkpkssassspatsss 44
                    +    KW d+ d++ + r + +++ ++ +  ++
      KHJ35364.1 51 IDAVDKWADYEDQIRALRTQLKQRVQTTQVVDP 83
                    566789999999998876666666555554444 PP

  == domain 2  score: 9.9 bits;  conditional E-value: 0.0019
  NAM-associated  34 sassspatsssestdee.dssesssesseesaadsestsssrlkRPiGkkkaKekrke........askdeealeklasaqkkiakkskekkeea 119
                      +  sp++sss+s+    +s ++ss+ss+ s+++s st++s+++  +  +++K  r+         +++ ee   +l+ + +++  ++++++   
      KHJ35364.1 125 LSPTSPTSSSSSSSLSPsSSLSPSSSSSSSSSSSSLSTTTSNTELTEALTREKTLRQAaegklsetSEEIEELSAQLFMQANEMVAVERRMRA-- 217
                     333333333333333344555666666666667777777777888888888888888774444444333334444444444444444444443.. PP

  NAM-associated 120 eleekkldieeekveaeqrqa 140
                      + e++l+i e++ + +++++
      KHJ35364.1 218 -NLESRLEILEKRDQEKKQRL 237
                     .46777888777665555444 PP

>> SlyX  SlyX
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   2.5     0.078        46      20      50 ..      23      53 ..      20      90 .. 0.68
   2 ?    7.8   6.4    0.0085       5.1       9      57 ..     184     233 ..     181     243 .. 0.84
   3 ?   -0.5   0.1       3.3     2e+03       3      14 ..     235     246 ..     233     250 .. 0.67

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.078
                HHHHHHHHHHHHHHHHHHHHHHHHHHT-XXX CS
        SlyX 20 eeLndvvaeqqqqidrlqrqlrllaerlkel 50
                e+ + + ++ +qqi+ l  q++ l+ r+ ++
  KHJ35364.1 23 EDISSIGVKMHQQIEDLGSQVQILTARVIDA 53
                5566666777778888888888777777433 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0085
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHT-XXXXXXXXXX CS
        SlyX   9 EiklafqedtieeLndvvaeqqqqidrlqrqlrl.laerlkeleessgas 57 
                 E kl+ + + ieeL+++++ q+ ++ + +r++r+ l+ rl+ le++++++
  KHJ35364.1 184 EGKLSETSEEIEELSAQLFMQANEMVAVERRMRAnLESRLEILEKRDQEK 233
                 78999999************************964888888888776654 PP

  == domain 3  score: -0.5 bits;  conditional E-value: 3.3
                 HHHHHHHHHHHH CS
        SlyX   3 erleeLEiklaf 14 
                 +rle+LE  +  
  KHJ35364.1 235 QRLERLENAIQR 246
                 788888877655 PP

>> Mod_r  Modifier of rudimentary (Mod(r)) protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.1     0.031        19      25      71 ..      32      79 ..      22      88 .. 0.76
   2 ?    5.8  10.7     0.022        13       4      87 ..     156     240 ..     153     250 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.031
       Mod_r 25 l.pevkqlkeekeellaeneslaeknlslepeleelrselqekleelk 71
                + +++++l ++ + l a  ++  +k  + e++++ lr +l+++ ++++
  KHJ35364.1 32 MhQQIEDLGSQVQILTARVIDAVDKWADYEDQIRALRTQLKQRVQTTQ 79
                435677888888888888888888888888888888888888888776 PP

  == domain 2  score: 5.8 bits;  conditional E-value: 0.022
       Mod_r   4 SkeeLqelledeeklealvktlpevkqlkeekeellaeneslaeknlslepeleelrselqekle.elkelekefeekeqeldel 87 
                 S++ L    ++ e+ eal+ +    ++ + +++e  +e+e+l  +   + +e+  +  ++ + le  l+ lek+ +ek+q+l++l
  KHJ35364.1 156 SSSSLSTTTSNTELTEALTREKTLRQAAEGKLSETSEEIEELSAQLFMQANEMVAVERRMRANLEsRLEILEKRDQEKKQRLERL 240
                 788899999999999999998888899999999**9******9999999999999999999999967999999999999999876 PP

>> DUF737  Protein of unknown function (DUF737)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.7  18.4    0.0034         2      45     175 ..     111     248 ..      46     251 .. 0.60

  Alignments for each domain:
  == domain 1  score: 8.7 bits;  conditional E-value: 0.0034
      DUF737  45 p...........eelap..pqessskaaestsapssasssssqakveeeelrkkikeelqkrleeeqakaeavqeelakllerEreaaqeelteailre 130
                 +           ++l+p  p++sss+++ s s+  s+sssss+++++ +   +  + el++ l +e+++++a + +l+ + e      +e  ++ +++ 
  KHJ35364.1 111 QssptektpvasSSLSPtsPTSSSSSSSLSPSSSLSPSSSSSSSSSSSSLSTTTSNTELTEALTREKTLRQAAEGKLSETSE----EIEELSAQLFMQA 205
                 011111111112112222122222222222222224445555555555566778889999999******9996665555444....4445555678999 PP

      DUF737 131 rlstedErlkaqllelerkarqLeekekeLkkqdafYkeqlakLe 175
                  +++  Er++ + l  e++   Le++++e k++ +   + ++++e
  KHJ35364.1 206 NEMVAVERRMRANL--ESRLEILEKRDQEKKQRLERLENAIQRIE 248
                 99999999999988..78888888888887766555555555555 PP

>> FAM76  FAM76 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0       1.1   6.7e+02     197     240 ..      33      76 ..       8      84 .. 0.66
   2 ?    8.6   7.1    0.0017         1     173     291 ..     117     236 ..     104     249 .. 0.58

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 1.1
       FAM76 197 aeekesnetskksldsnssdhlvavtqLkeeiaslkkqleqkdq 240
                 +++ e  +++ + l +++ d + + ++ +++i+ l+ ql+q+ q
  KHJ35364.1  33 HQQIEDLGSQVQILTARVIDAVDKWADYEDQIRALRTQLKQRVQ 76 
                 44444445555567777777777778888888888888888755 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.0017
       FAM76 173 kkkskkhkkrssrlevskleeek...laeekesnetskksldsnssdhlvavtqLkeeiaslkkqleqkdqellekdkkitelkaellekekelreklk 268
                 k+   +++ ++++  +s+ ++ +    ++ ++s+ +s++s +s+s       t+L e +++ k   +  + +l+e   +i el a+l+ + +e+    +
  KHJ35364.1 117 KTPVASSSLSPTSPTSSSSSS-SlspSSSLSPSS-SSSSSSSSSSLSTTTSNTELTEALTREKTLRQAAEGKLSETSEEIEELSAQLFMQANEMVAVER 213
                 222222222222211111111.111112222222.2222333333344455678888888777777778899999999999999999999999999999 PP

       FAM76 269 elekeakekieklekkirellke 291
                 +++++ ++++e lek+ +e ++ 
  KHJ35364.1 214 RMRANLESRLEILEKRDQEKKQR 236
                 99999999999998877765554 PP

>> BST2  Bone marrow stromal antigen 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0       1.3   7.7e+02      54      85 ..      22      53 ..      17      59 .. 0.76
   2 ?    2.2   0.2      0.46   2.8e+02      47      85 ..      36      74 ..      27      80 .. 0.69
   3 ?    8.8   3.4    0.0041       2.4      47      87 ..     166     206 ..     149     213 .. 0.84
   4 ?    4.7   2.5     0.074        44      46      79 ..     215     248 ..     202     250 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 1.3
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        BST2 54 LekekaqsqkqqakvqelqgeikkLnqkLqda 85
                Le   + + k+++++++l  +++ L+ ++ da
  KHJ35364.1 22 LEDISSIGVKMHQQIEDLGSQVQILTARVIDA 53
                56666677788899999999999998877665 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.46
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        BST2 47 vvtLkasLekekaqsqkqqakvqelqgeikkLnqkLqda 85
                +++L +  +  +a+  ++  k  + +++i+ L  +L++ 
  KHJ35364.1 36 IEDLGSQVQILTARVIDAVDKWADYEDQIRALRTQLKQR 74
                556666666666677777777778888888888888775 PP

  == domain 3  score: 8.8 bits;  conditional E-value: 0.0041
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        BST2  47 vvtLkasLekekaqsqkqqakvqelqgeikkLnqkLqdaea 87 
                   +L+++L++ek+  q ++ k+ e  +ei++L  +L  +  
  KHJ35364.1 166 NTELTEALTREKTLRQAAEGKLSETSEEIEELSAQLFMQAN 206
                 3579******************************9965554 PP

  == domain 4  score: 4.7 bits;  conditional E-value: 0.074
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        BST2  46 tvvtLkasLekekaqsqkqqakvqelqgeikkLn 79 
                    +L++ Le  + + q+++++++ l++ i++++
  KHJ35364.1 215 MRANLESRLEILEKRDQEKKQRLERLENAIQRIE 248
                 5579999**********************99865 PP

>> Exonuc_VII_L  Exonuclease VII, large subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.8  13.9     0.029        17     147     226 ..     170     248 ..      22     263 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.8 bits;  conditional E-value: 0.029
  Exonuc_VII_L 147 eqleelerrlekaikrlleekkqrleklasrlk.speellerkrqrldeleerleralkkqlkkkrerleelkerl.kekle 226
                    +  + e+ l++a++ +l+e ++++e+l+ +l  +++e+++ +r+   +le+rle  l+k+ ++k++rle+l++++ +  +e
    KHJ35364.1 170 TEALTREKTLRQAAEGKLSETSEEIEELSAQLFmQANEMVAVERRMRANLESRLEI-LEKRDQEKKQRLERLENAIqR--IE 248
                   33334567788888888888888888888888547888888888888888888888.788888888888888866632..22 PP

>> FapA  Flagellar Assembly Protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0       1.7     1e+03     317     410 ..      40      73 ..      21      86 .. 0.44
   2 ?    6.4   6.6    0.0047       2.8     329     406 ..     168     249 ..     148     263 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1.7
        FapA 317 Gselgtkteievgldepelkeklkeleeeleeleeeleklkkkikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelkeeles 410
                 Gs                                                            q++ l+   +  ++++++ e+++ +l  +l++
  KHJ35364.1  40 GS------------------------------------------------------------QVQILTARVIDAVDKWADYEDQIRALRTQLKQ 73 
                 33............................................................33333333333333333333333333333333 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.0047
        FapA 329 gldepelkekl..keleeeleeleeeleklkkk..ikklpklkaekqlesekkeqlkklletkeklkeeleeleeelkelke 406
                 +l e  ++ek+  ++ e +l e+ ee+e+l ++  ++ +++ ++e ++ ++ ++ l+ l++  ++ k++le le+ +++++ 
  KHJ35364.1 168 ELTEALTREKTlrQAAEGKLSETSEEIEELSAQlfMQANEMVAVERRMRANLESRLEILEKRDQEKKQRLERLENAIQRIER 249
                 4443444444455888999999999999999999999999988999999999999999999999999999999999998875 PP

>> SMYLE_N  Short myomegalin-like EB1 binding proteins, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.8  13.1     0.015       8.9     211     333 ..     124     241 ..     103     262 .. 0.48

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.015
     SMYLE_N 211 eeavselaaaelaeaksssegesle.eespassvesLdtavdvvkpakkkeeesekeakedeksdslseekteaesslsgsklelalsllkal.eyrpv 307
                   + +++++++++++ s+s++ s + ++s++ss +sL t+++ ++ +++  +e++  ++ + k  ++see +e +        +l ++  + +   r +
  KHJ35364.1 124 SLSPTSPTSSSSSSSLSPSSSLSPSsSSSSSSSSSSLSTTTSNTELTEALTREKTLRQAAEGKLSETSEEIEELS-------AQLFMQANEMVaVERRM 215
                 111222222222222222222222224445556667777776555554444444444444444444444433333.......33333333333245788 PP

     SMYLE_N 308 ksargsklpvlvksklsesklkksvl 333
                 + + +s+l +l k+ +++++  + ++
  KHJ35364.1 216 RANLESRLEILEKRDQEKKQRLERLE 241
                 99999******999888777664443 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9  19.8     0.013       7.7     307     446 ..     115     243 ..     103     262 .. 0.34

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.013
    Macoilin 307 esellveesvkskssssssssn...knskkas..agsagssnssskkhsessksvtsssssknskkqklpaGkssaalkdaaenslpnnqlskkdalvr 400
                 ++++ v +s+ s +s++ssss+   + s++ s  ++s++ss+sss +  +s+ + t++ ++++  +q +  Gk s+++++ +e  l+ +   + +++v 
  KHJ35364.1 115 TEKTPVASSSLSPTSPTSSSSSsslSPSSSLSpsSSSSSSSSSSSLSTTTSNTELTEALTREKTLRQAA-EGKLSETSEE-IE-ELSAQLFMQANEMVA 210
                 222222222222222222222211111111110011222222222222222222233323332222222.3443332222.22.233334444444444 PP

    Macoilin 401 Leadik.kLkaeLqasrqteqelrskissltseerslkselqqlkke 446
                 +e  ++  L + L+   + +qe +++++ l +               
  KHJ35364.1 211 VERRMRaNLESRLEILEKRDQEKKQRLERLEN--------------A 243
                 44444214555555555555555555544443..............2 PP

>> POTRA_TamA_1  POTRA domain TamA domain 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       6.1   3.7e+03      32      45 ..      63      76 ..      47      79 .. 0.63
   2 ?   -1.2   0.0       3.8   2.3e+03      10      41 ..     178     206 ..     170     211 .. 0.64
   3 ?    9.0   2.2    0.0024       1.4       7      41 ..     211     245 ..     206     252 .. 0.85

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 6.1
  POTRA_TamA_1 32 rlerllrraeeeir 45
                  +++ l+ +++++++
    KHJ35364.1 63 QIRALRTQLKQRVQ 76
                  56666666666665 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 3.8
  POTRA_TamA_1  10 eleeNvrayLsliseeesesserlerllrrae 41 
                   +l++  +  Ls+ see +e s    +l  +a 
    KHJ35364.1 178 TLRQAAEGKLSETSEEIEELSA---QLFMQAN 206
                   5666667777777766666666...5555544 PP

  == domain 3  score: 9.0 bits;  conditional E-value: 0.0024
  POTRA_TamA_1   7 ldgeleeNvrayLsliseeesesserlerllrrae 41 
                   ++  +++N +++L++++++++e ++rlerl + ++
    KHJ35364.1 211 VERRMRANLESRLEILEKRDQEKKQRLERLENAIQ 245
                   567899*******************8888876654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (264 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2884  (0.160857); expected 358.6 (0.02)
Passed bias filter:                     1054  (0.0587874); expected 358.6 (0.02)
Passed Vit filter:                       184  (0.0102627); expected 17.9 (0.001)
Passed Fwd filter:                        50  (0.00278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              30  [number of targets reported over threshold]
# CPU time: 0.78u 0.31s 00:00:01.09 Elapsed: 00:00:00.45
# Mc/sec: 1780.85
//
Query:       KHJ35365.1  [L=282]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.031   14.3   0.5      0.031   14.3   0.5    2.9  3  zf-CCHC   Zinc knuckle


Domain annotation for each model (and alignments):
>> zf-CCHC  Zinc knuckle
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.9      0.25   4.4e+03       3       8 ..     193     198 ..     191     199 .. 0.78
   2 ?   14.3   0.5   1.7e-06     0.031       2      16 ..     210     224 ..     209     226 .. 0.91
   3 ?    0.2   0.5     0.052   9.4e+02       2       9 ..     229     236 ..     229     236 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 0.25
                 TSSSSS CS
     zf-CCHC   3 CynCGe 8  
                 C +C++
  KHJ35365.1 193 CKRCNG 198
                 999985 PP

  == domain 2  score: 14.3 bits;  conditional E-value: 1.7e-06
                 CTSSSSSSSSTTTTS CS
     zf-CCHC   2 kCynCGepGHiardC 16 
                  C nCG++ H a  C
  KHJ35365.1 210 SCANCGSTNHTADIC 224
                 6***********999 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.052
                 CTSSSSSS CS
     zf-CCHC   2 kCynCGep 9  
                 kC+ CG+p
  KHJ35365.1 229 KCRDCGGP 236
                 79999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (282 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       613  (0.0341904); expected 358.6 (0.02)
Passed bias filter:                      307  (0.0171231); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.19s 00:00:00.65 Elapsed: 00:00:00.39
# Mc/sec: 2169.48
//
Query:       KHJ35366.1  [L=78]
Description: hypothetical protein EV44_g1743 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (78 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       250  (0.0139439); expected 358.6 (0.02)
Passed bias filter:                      175  (0.00976072); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.24s 00:00:00.60 Elapsed: 00:00:00.40
# Mc/sec: 585.88
//
Query:       KHJ35367.1  [L=182]
Description: putative adp-ribosylation factor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-79  264.7   0.4    3.3e-79  264.4   0.4    1.0  1  Arf              ADP-ribosylation factor family
    1.4e-14   54.3   0.0    1.9e-14   53.9   0.0    1.2  1  Roc              Ras of Complex, Roc, domain of DAPkinase
    1.6e-14   53.8   0.0    1.9e-14   53.5   0.0    1.1  1  SRPRB            Signal recognition particle receptor beta su
    1.6e-13   50.6   1.1    1.5e-09   37.5   0.2    2.3  2  G-alpha          G-protein alpha subunit
    1.7e-13   50.5   0.0    1.9e-13   50.3   0.0    1.0  1  Ras              Ras family
    1.4e-10   40.9   0.0    1.7e-10   40.7   0.0    1.1  1  Gtr1_RagA        Gtr1/RagA G protein conserved region
    3.4e-06   27.1   0.0    5.4e-06   26.5   0.0    1.3  1  MMR_HSR1         50S ribosome-binding GTPase
     0.0097   15.2   0.9      0.029   13.7   0.9    1.8  1  6PF2K            6-phosphofructo-2-kinase
  ------ inclusion threshold ------
      0.062   13.5   0.1       0.17   12.0   0.1    1.8  2  TPM_phosphatase  TPM domain


Domain annotation for each model (and alignments):
>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  264.4   0.4   1.6e-82   3.3e-79       2     174 ..       6     176 ..       5     177 .. 0.98

  Alignments for each domain:
  == domain 1  score: 264.4 bits;  conditional E-value: 1.6e-82
                 HHHHHGGTT.TTEEEEEEEESTTSSHHHHHHHHHHSSCEECSSSSSEEEEEEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CTTHHHH CS
         Arf   2 lsilaklklkkkelrilllGLDnaGKtTilkklkleelvttvPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadreRleea 100
                 +++++++++ kke+ril++GLD+aGKtTil+klkl+e+vtt+PTigfnve++e+kn++ftvwDvGGq+k+RplW++Yf++t+++ifvvDs+dr+R+ ea
  KHJ35367.1   6 SKLFDRIWG-KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEA 103
                 567777888.9**************************************************************************************** PP

                 HHHHHHHCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEEEEEBTTTTBTHHHHHHHHHHH CS
         Arf 101 keeLkalleeeelkevallvlaNKqDlpealseeelrellgleelkgkrkleiqkcsavkgeglkeglewlses 174
                 +eeL+++l+e+el++++llv+aNKqDlp+a++++e++++lgl++lk +r+++iq+++a++g+gl+eglewl+++
  KHJ35367.1 104 REELQRMLNEDELRDAILLVFANKQDLPNAMNAAEITDKLGLHSLK-QRDWYIQSTCATSGDGLYEGLEWLAQT 176
                 **********************************************.************************987 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.9   0.0   9.6e-18   1.9e-14       1     119 [.      19     129 ..      19     130 .. 0.78

  Alignments for each domain:
  == domain 1  score: 53.9 bits;  conditional E-value: 9.6e-18
                 EEEEESSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEEGHHHHCHHHHH CS
         Roc   1 KvvlvGdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvydsrssenlkeWl 99 
                 ++++vG  ++GKt++l ++  +++  ++ +tig ++ t e+            k++++ +WD++Gq+++r l ++y+++ + +i+v+ds++ +++ e  
  KHJ35367.1  19 RILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVETVEY------------KNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAR 104
                 699*******************996.568*****9966443............5799*******************************88877665555 PP

                 HHHHHHCSSS....-E.EEEEE-TT CS
         Roc 100 kelkkvagks....pv.ilvgnkiD 119
                 +el+++ +++     + ++ +nk D
  KHJ35367.1 105 EELQRMLNEDelrdAIlLVFANKQD 129
                 5555554432111144156679998 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.5   0.0   9.6e-18   1.9e-14       2     137 ..      16     143 ..      15     151 .. 0.89

  Alignments for each domain:
  == domain 1  score: 53.5 bits;  conditional E-value: 9.6e-18
                 ---EEEEE-STTSSHHHHHHHHHHSS---B---S.S-EEETTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEETTS-HHHHHHHHHHH CS
       SRPRB   2 skpavllvGlsdsGKTslftrLttdsvkktvtSq.essaalkvksekgskltliDfPGheklrqklleklkaksslkglvfvvDStidpkevkevAEll 99 
                 ++ ++l+vGl  +GKT+++ +L  +++ +t   +  +  + ++   k+ ++t+ D+ G++k+r     +  + ++ +g++fvvDS  d  +v e  E l
  KHJ35367.1  16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIgFNVETVEY---KNIQFTVWDVGGQDKIRPL-WRH--YFQNTQGIIFVVDSN-DRDRVVEAREEL 107
                 5678******************************888999999...*****************75.555..57889********98.666788999999 PP

                 HHHHHHHHHHTT---EEEEEE-TTSTT---HHHHHHHH CS
       SRPRB 100 yeilliteklkdavdiliACnKqelflakspklikdaL 137
                   +l + e l+da+  l+  nKq+l  a ++  i d+L
  KHJ35367.1 108 QRMLNEDE-LRDAIL-LVFANKQDLPNAMNAAEITDKL 143
                 9*999999.788885.5666*************99988 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.9   0.0   4.6e-05     0.092      21      45 ..      15      39 ..       7      44 .. 0.89
   2 !   37.5   0.2   7.8e-13   1.5e-09     185     252 ..      45     111 ..      40     130 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 4.6e-05
                ..EEEEEEEESTTSSHHHHHHHHHH CS
     G-alpha 21 krevkllllGqseSGKsTilkqlkl 45
                k+e+++l++G +  GK+Til +lkl
  KHJ35367.1 15 KKEMRILMVGLDAAGKTTILYKLKL 39
                569*****************99985 PP

  == domain 2  score: 37.5 bits;  conditional E-value: 7.8e-13
                 -----SEEEEEEECT-TEEEEEEEE-SSHHHHHGTCCCTTTECEEEEEEEGGGTT-B-SS-TTSBHHH CS
     G-alpha 185 rlktvGisetkfevdsklefrivdvgGqrserkkWvpffddvdaiiFlvslsefdqvlyedekvnrle 252
                  ++t+G++  ++e++ +++f+++dvgGq + r+ W ++f++++ iiF+v   + d v +  e+ +r+ 
  KHJ35367.1  45 TIPTIGFNVETVEYK-NIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRML 111
                 478999999999999.*********************************9888888877777766663 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.3   0.0   9.5e-17   1.9e-13       2     160 ..      20     177 ..      19     179 .. 0.84

  Alignments for each domain:
  == domain 1  score: 50.3 bits;  conditional E-value: 9.5e-17
                 EEEEESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHTHHHHHHHHHHH CS
         Ras   2 lvlvGdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfenvkkwveeikrv 100
                 +++vG  a GKt++l++   ++  ++ ++Tig++    +  v+ k++++++wD  Gq++ + l + y+++++gi+ v d ++r+   ++++ ++ + + 
  KHJ35367.1  20 ILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE--T--VEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNE 113
                 899*******************9976.9***87654..4..456799**********************************999998888666665555 PP

                 ST.TTSEEEEEEETTTGGG...G-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHHHHHHHHHHHH CS
         Ras 101 ae.envpivLvGnKvDlee...kravsteegeelakelglkfletSAktnenveeafeellrei 160
                  e ++  +++ +nK Dl +     +++ + g +  k+ +     t A +  ++ e +e l++++
  KHJ35367.1 114 DElRDAILLVFANKQDLPNamnAAEITDKLGLHSLKQRDWYIQSTCATSGDGLYEGLEWLAQTL 177
                 55577888899******99777788898889888888888888888888888888888877766 PP

>> Gtr1_RagA  Gtr1/RagA G protein conserved region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.7   0.0   8.6e-14   1.7e-10       1     135 [.      19     142 ..      19     162 .. 0.88

  Alignments for each domain:
  == domain 1  score: 40.7 bits;  conditional E-value: 8.6e-14
   Gtr1_RagA   1 kvLLmGksgsGKtsmrsiiFdnylardtlrlgatidveksevrflgnltlnlwDcgGqeafveeylssqkeeifrnvgvliyVfDvesre.leedletl 98 
                 ++L++G   +GKt++      ++   ++++   ti  + ++v  ++n+++ +wD+gGq+++          + f+n + +i+V+D+++r+ + e+ e+l
  KHJ35367.1  19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETV-EYKNIQFTVWDVGGQDKIRPLW-----RHYFQNTQGIIFVVDSNDRDrVVEAREEL 107
                 589**********85....5678889999999**********.599*************987664.....899**************997799999999 PP

   Gtr1_RagA  99 keilealrqyspeakvfvlihKmDliqedereeifee 135
                 +++l++  +  ++a + v+ +K Dl + ++ +ei ++
  KHJ35367.1 108 QRMLNE--DELRDAILLVFANKQDLPNAMNAAEITDK 142
                 999985..6679999*********9998888887765 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.0   2.7e-09   5.4e-06       1     111 [.      19     124 ..      19     127 .. 0.72

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 2.7e-09
                 EEEEEESTTSSHHHHHHHH.HTSTEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHH.HHHHHHHHHHCTSEEEEEEETT.TTCSHHHHHH CS
    MMR_HSR1   1 evaivGrpNvGKStLinal.tgekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseek.glgkaflaleeadlillvvdas.eeklkpldee 96 
                 +++ vG   +GK+t++ +l +g   iv+ +p  T+  n ++v++k+ +++++D+ G  +    +   l +++ +  +++ i++vvd++ ++ + + +ee
  KHJ35367.1  19 RILMVGLDAAGKTTILYKLkLG--EIVTTIP--TIGFNVETVEYKNIQFTVWDVGG-QD----KIrPLWRHYFQ--NTQGIIFVVDSNdRDRVVEAREE 106
                 5889***************444..5788787..7777777777779**********.43....22357777775..578*******7764467777889 PP

                 HHHHHHH...TTSEEEEE CS
    MMR_HSR1  97 leellee...akkplilv 111
                 l+++l+e   ++  l++ 
  KHJ35367.1 107 LQRMLNEdelRDAILLVF 124
                 999987764222323334 PP

>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.7   0.9   1.5e-05     0.029      12      51 ..      16      55 ..      11     142 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 1.5e-05
                S-EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHH CS
       6PF2K 12 sklvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgk 51
                +++ i++vGL a gKt+i  kl      ++++t  Fnv  
  KHJ35367.1 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVET 55
                56789****************9887778888888888865 PP

>> TPM_phosphatase  TPM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   8.7e-05      0.17      33      95 ..      43     117 ..      29     137 .. 0.81
   2 ?   -1.9   0.0       1.8   3.6e+03      94     112 ..     136     154 ..     124     155 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 8.7e-05
                      EEEESB-..TT--HHHHHHHHHHHHST.TTTS.........-S.SEEEEEEETTTTEEEEEE-STTTTT--HHHHH CS
  TPM_phosphatase  33 vvtvdsl..dgediedyadelfdkwgl.gkkk.........kd.ngvllliavddrkvrietgyglegaltdarae 95 
                      v t++++  +  ++ +y +  f  w++ g++k         ++ +g++++++ +dr+  +e  ++l+++l+++++ 
       KHJ35367.1  43 VTTIPTIgfN-VETVEYKNIQFTVWDVgGQDKirplwrhyfQNtQGIIFVVDSNDRDRVVEAREELQRMLNEDELR 117
                      6677777422.2244999999999***66666999999999777*******999**************99988775 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.8
                      HHHHHHHTHHHHHHHT-HH CS
  TPM_phosphatase  94 aesildetilpalkdgdya 112
                      a +i d+  l +lk++d++
       KHJ35367.1 136 AAEITDKLGLHSLKQRDWY 154
                      4567777777788888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (182 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       626  (0.0349155); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        66  (0.00368119); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.44u 0.20s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 1492.82
//
Query:       KHJ35368.1  [L=379]
Description: putative transcription factor bzip [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      3e-14   53.0   0.0    1.1e-13   51.2   0.0    1.9  1  DUF3425   Domain of unknown function (DUF3425)
    1.6e-05   24.9  21.3    4.5e-05   23.5  21.2    1.8  1  bZIP_1    bZIP transcription factor
  ------ inclusion threshold ------
       0.45   10.2   3.2       0.75    9.5   3.2    1.2  1  DUF2937   Protein of unknown function (DUF2937)
        1.5    9.0  28.4        2.3    8.4  23.9    2.8  3  bZIP_2    Basic region leucine zipper


Domain annotation for each model (and alignments):
>> DUF3425  Domain of unknown function (DUF3425)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.2   0.0   2.5e-17   1.1e-13      12     118 ..     265     359 ..     257     363 .. 0.79

  Alignments for each domain:
  == domain 1  score: 51.2 bits;  conditional E-value: 2.5e-17
     DUF3425  12 eeaveklpenlrPtelQlriaHpveidvlpwpelRdrllrafqeeeidedeffrdv.........vstlivWsieeeeletaeissaelsagdvtdleg 101
                 ++ ++ lp +l+Pt+ Ql++aH++ id++  p lRdrll  ++e      +f+ ++         ++ l  W                    d+ ++ +
  KHJ35368.1 265 QTMTNDLPAPLKPTKRQLETAHYHGIDMIASPSLRDRLLSINNE---AAYNFVSELgiissenedTCALTIWG------------------DDPLNELN 342
                 455667**********************************6666...34455555533333333333788886..................78****** PP

     DUF3425 102 WelkesFfrkYpylvdg 118
                 Wel++sF++++ +lv +
  KHJ35368.1 343 WELSKSFLERWGWLVGN 359
                 **************987 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5  21.2     1e-08   4.5e-05       5      63 ..      28      83 ..      25      90 .. 0.94

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 1e-08
                XXXXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  5 KrekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLkseleelkkevekLkskv 63
                K e++++ NR a+r++R+R+++ ++ Le+  k+L++e +   +e+e+l+ ++e+L++++
  KHJ35368.1 28 KEERKREYNRLAQREFRRRRKEHMKSLEQAQKELSSERA---EEIERLRLQNEELRKEN 83
                99***********************************99...99999999999999987 PP

>> DUF2937  Protein of unknown function (DUF2937)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   3.2   0.00017      0.75      37     103 ..      27      92 ..      24     101 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00017
     DUF2937  37 elkrqlagfqatAkrffkgdlealiahyrqsedpvvradaesiqalverlerLeqelqalqqaslle 103
                 e ++   ++++ A+r f+  +++  + ++q + +  +++ae+i++l  + e+L++e + l+  ++++
  KHJ35368.1  27 EKEERKREYNRLAQREFRRRRKEHMKSLEQAQKELSSERAEEIERLRLQNEELRKENSVLRA-QIYN 92 
                 66777889**************************************************9998.7776 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4  23.9   0.00051       2.3       2      54 .]      26      82 ..      25      82 .. 0.88
   2 ?    3.4   4.2     0.018        81      30      52 ..      65      87 ..      63      92 .. 0.70
   3 ?   -1.8   0.1      0.75   3.4e+03      11      16 ..     305     310 ..     297     313 .. 0.78

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00051
                XXXXXXXXXXXXXXXXX-HHHHHHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHH CS
      bZIP_2  2 ddeyrerRrkNreAarrsRekkkakeeeleervkeLe....eeNaqLrqkveqLeke 54
                +++++++R+ Nr A r +R ++k+++++le+  keL+    ee+++Lr ++e+L+ke
  KHJ35368.1 26 TEKEERKREYNRLAQREFRRRRKEHMKSLEQAQKELSseraEEIERLRLQNEELRKE 82
                688899999***********************9999733336899********9998 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.018
                HHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2 30 leervkeLeeeNaqLrqkveqLe 52
                 +e++++L+ +N++Lr++++ L+
  KHJ35368.1 65 RAEEIERLRLQNEELRKENSVLR 87
                56777778888888877776665 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.75
                 XXXXXX CS
      bZIP_2  11 kNreAa 16 
                  N+eAa
  KHJ35368.1 305 INNEAA 310
                 69**99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (379 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1819  (0.101456); expected 358.6 (0.02)
Passed bias filter:                      672  (0.0374812); expected 358.6 (0.02)
Passed Vit filter:                        92  (0.00513135); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.61u 0.27s 00:00:00.88 Elapsed: 00:00:00.43
# Mc/sec: 2659.19
//
Query:       KHJ35369.1  [L=202]
Description: putative endosomal p24b protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-49  168.2   0.0      2e-49  168.0   0.0    1.1  1  EMP24_GP25L  emp24/gp25L/p24 family/GOLD


Domain annotation for each model (and alignments):
>> EMP24_GP25L  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  168.0   0.0   1.1e-53     2e-49       2     182 .]      21     197 ..      20     197 .. 0.95

  Alignments for each domain:
  == domain 1  score: 168.0 bits;  conditional E-value: 1.1e-53
  EMP24_GP25L   2 ltfklpageekCfyeelkkgtlltgsyqvtdgg....aaldvdlsvkdpdgngerlvkkkdresegdfsftakesgeykvCfdnsfstksskkvsfdi 95 
                   ++ lpa +++Cf+e+l+k++++t+++qv d++     +l++d+ ++  ++ g  + ++k ++++ d+sf+a+ +g+y++Cf+n++++ +sk++sf++
   KHJ35369.1  21 HNINLPAYGRECFHETLHKEDKMTVTFQVGDREfggaGSLQIDFWIE--NPVGGYVTQQKAVANG-DYSFQAENDGKYTYCFSNEHWSAASKDISFNV 115
                  6789**************************999999988********..7777999999888777.******************************** PP

  EMP24_GP25L  96 evgseasdykdsakkekletleselkkleekldsikreqkylrereerlrdtnestnsrvvwwsilqllvlvlvavlqvyyLkrfFk 182
                  +    ++      ++++ ++lese++kl+e l ++k+eq y+  re+ +r+t+estn rv wwsi+q+ vl++ +++qv+ LkrfF+
   KHJ35369.1 116 HGIVYVP-----EPESHADPLESEVQKLSELLAQVKDEQSYIVLRERIHRNTAESTNARVKWWSIFQMTVLLAEGIFQVWWLKRFFE 197
                  *977664.....59************************************************************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (202 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       832  (0.0464053); expected 358.6 (0.02)
Passed bias filter:                      645  (0.0359752); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 1552.07
//
Query:       KHJ35370.1  [L=682]
Description: hypothetical protein EV44_g5381 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (682 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       537  (0.0299515); expected 358.6 (0.02)
Passed bias filter:                      261  (0.0145574); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.55u 0.22s 00:00:00.77 Elapsed: 00:00:00.39
# Mc/sec: 5290.67
//
Query:       KHJ35371.1  [L=421]
Description: putative ethanolamine kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.9e-52  176.9   0.1      1e-50  172.3   0.0    2.2  2  Choline_kinase  Choline/ethanolamine kinase
    9.6e-09   35.5   0.1    2.5e-08   34.2   0.0    1.7  2  APH             Phosphotransferase enzyme family
    0.00048   19.5   0.0    0.00095   18.6   0.0    1.5  1  EcKinase        Ecdysteroid kinase
  ------ inclusion threshold ------
      0.095   11.5   0.0       0.12   11.2   0.0    1.3  1  DUF1679         Protein of unknown function (DUF1679)
       0.15   11.8   0.7        6.4    6.5   0.1    2.2  2  DUF2451         Protein of unknown function C-terminus (DUF24


Domain annotation for each model (and alignments):
>> Choline_kinase  Choline/ethanolamine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.3   0.0   2.9e-54     1e-50       2     213 .]      77     318 ..      76     318 .. 0.91
   2 ?    2.3   0.1     0.031   1.1e+02     164     177 ..     373     386 ..     368     390 .. 0.85

  Alignments for each domain:
  == domain 1  score: 172.3 bits;  conditional E-value: 2.9e-54
                     SSEEEEEEE-TTCTTCCHHHHHHHHHHHHHHTTSSS-EEEEETTEEEEE--TCEE--TTGGGCHHHHHHHHHHHHHHTTCHH............. CS
  Choline_kinase   2 kkkvllRiygkkteelidretElvvfallserglgpklygifenGrieefiesrtlstedlrepeiskkiAkklaelHslel............. 83 
                     ++ +llR yg++te +idre+E+++++ll++++l+p+l+++f+nG++++f+ ++ +st+dlr++e++ ++A++lae+H++++             
      KHJ35371.1  77 NEAILLRAYGPGTELIIDREQEAQNHELLMQYKLAPELLARFHNGMLYRFLRGSVTSTTDLRKQEVWLAVARRLAEWHAVVPciqnidgksnnys 171
                     6889******************************************************************************************* PP

                     ........................TTSSSS-HHHHHHHHHHHCCS.TT..ECHHGGCCHCCCTHHHHHHHHHTHHHHHHCHGG-EEEE-S--SGG CS
  Choline_kinase  84 .......................eseskespslwktmqkwllnkeaqtkakkekkkkqlklinledlekelekleklleelespvvfcHnDlqeg 155
                                            ++  + +p+lw+ ++kw   + + t++  ek+++q   i  ++ ++ + +l + l   ++++vf+H+Dl++g
      KHJ35371.1 172 eqysvyqpisnsivtelpkiphlTHLENIQPNLWTVLKKW--VSAVPTNTIAEKSRQQ---ILQKETDRLILELSNRLGLGKNSLVFAHCDLLSG 261
                     **********************9889999***********..4444444444444444...44455555556666889999************** PP

                     GEEE........-CTTEEEE--GTT-EEEEHHHHHHHHHHHTTEEHHHCSTSHEE-GGGS--HHH CS
  Choline_kinase 156 Nill.......nkeekklvlIDFEYagynyrgfDlanhfiEwagdyeeeeaffkldyskypsreq 213
                     Ni++       ++ + ++ +IDFEYa++++++fD+anhf+Ew g        f++dy+++p+++q
      KHJ35371.1 262 NIVMlprstvdANATLTVSFIDFEYATPSPAAFDIANHFAEWGG--------FDCDYHQLPTQSQ 318
                     **********999*******************************........********99865 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.031
                     TEEEE--GTT-EEE CS
  Choline_kinase 164 kklvlIDFEYagyn 177
                     +k+  IDF Ya+y 
      KHJ35371.1 373 SKISKIDFDYASYA 386
                     68899*******97 PP

>> APH  Phosphotransferase enzyme family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.2   0.0   6.8e-12   2.5e-08      25     213 ..      82     304 ..      72     334 .. 0.69
   2 ?   -3.4   0.1       2.1   7.4e+03     191     199 ..     378     386 ..     378     399 .. 0.88

  Alignments for each domain:
  == domain 1  score: 34.2 bits;  conditional E-value: 6.8e-12
                 EEEE-TTS-HHHHHHHHHHH..HHHHHTT-B--B-CTTBS-EEETTEEEEEEE----EE-SSHHHHHHHHHHHHHHHHHHCCHHCH............. CS
         APH  25 lrrnpparaaeeirrevall..rlLakagvpvPevlagdtddeeigllfalieyvpgrsllrklsaaqlpellealgeflaalhqv............. 108
                 lr + p+ ++  i re++     lL + ++ +Pe+la    + ++g+   l+ ++ g + ++  ++  ++e++ a+++ la+ h+v             
  KHJ35371.1  82 LRAYGPG-TELIIDREQEAQnhELLMQYKL-APELLA----RFHNGM---LYRFLRGSVTST--TDLRKQEVWLAVARRLAEWHAVvpciqnidgksnn 169
                 5666666.4444444444443133444444.888888....556665...555555566666..5678999999999****999997777777666666 PP

                 ......................-STTTB-SHHCHTCCHHHHHHCHHH.CCCGCCTCC..HHHHHHHHHHHHHHHH--S.SS-EEEE-SS-SGGGEEEC. CS
         APH 109 ....................d.paalpladflaqdlellrqlesata.rllaselld..lleeleeqvlaalaallpg.elptvllHgDlhpgNllvd. 181
                                       p   +l+ + +  +++l + +sa + + +a++ ++  l+ e ++ ++ +l  +l     + v+ H+Dl +gN+++  
  KHJ35371.1 170 yseqysvyqpisnsivtelpKiPHLTHLENIQPNLWTVLKKWVSAVPtNTIAEKSRQqiLQKETDR-LILELSNRLGLgKNSLVFAHCDLLSGNIVMLp 267
                 666666666666666665553355666667887888888888888887777777777666666666.44444444433699*****************9 PP

                 .......TTEEEEE---TT-EEEECCHHHHCCHHHCS CS
         APH 182 .....pddgrvtGviDfedaglgpplyDlavllrswt 213
                      ++ +  + +iDfe+a+++p+++D+a + + w+
  KHJ35371.1 268 rstvdANATLTVSFIDFEYATPSPAAFDIANHFAEWG 304
                 9999655555589******************996575 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 2.1
                 ---TT-EEE CS
         APH 191 iDfedaglg 199
                 iDf++a+++
  KHJ35371.1 378 IDFDYASYA 386
                 899999986 PP

>> EcKinase  Ecdysteroid kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   2.6e-07   0.00095     117     262 ..     143     301 ..     131     340 .. 0.70

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 2.6e-07
    EcKinase 117 lklvlkkLAkfHAaSlalke...ekpevfkelk.kglleedyvssalkeafeelleellkaalealreelpelekea...ekleklkenlferllelve 208
                   +v ++LA++HA+  ++++   ++++  +++  ++++++ +v +  k  + + le+   ++ ++l++ +     ++   +  +++ ++ ++rl   ++
  KHJ35371.1 143 WLAVARRLAEWHAVVPCIQNidgKSNNYSEQYSvYQPISNSIVTELPKIPHLTHLENIQPNLWTVLKKWVSAVPTNTiaeKSRQQILQKETDRLILELS 241
                 567899***********9997776777778887689999999999888888888888888877777555444443335554444444444444444443 PP

    EcKinase 209 ...ekeeefnvlnHGDlwvnNimf...kydeegepedvilvDFQlsrygSpalDLlyfly 262
                       ++  v+ H Dl + Ni +   +  ++++   v ++DF ++  ++ a+D++  + 
  KHJ35371.1 242 nrlGLGKNSLVFAHCDLLSGNIVMlprSTVDANATLTVSFIDFEYATPSPAAFDIANHFA 301
                 4667889999***********97623223344488999*****************97764 PP

>> DUF1679  Protein of unknown function (DUF1679)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.4e-05      0.12     244     313 ..     224     299 ..     150     347 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.4e-05
     DUF1679 244 veeylkeililekaskvskvlGi...kkvlvhgDlwsaNiLfseee..egklklk.kviDyQlvslgnpaeDlvrl 313
                  ++   ++++   + ++s+ lG+   + v+ h Dl+s Ni+    +  +++ +l+   iD+  ++ +++a+D++  
  KHJ35371.1 224 SRQQILQKETDRLILELSNRLGLgknSLVFAHCDLLSGNIVMLPRStvDANATLTvSFIDFEYATPSPAAFDIANH 299
                 4444455555566778888888872445999********9875433113333333268**************9865 PP

>> DUF2451  Protein of unknown function C-terminus (DUF2451)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.5   0.1    0.0018       6.4      31      94 ..     114     178 ..     102     215 .. 0.84
   2 ?    3.6   0.1     0.014        50     175     191 ..     317     333 ..     309     346 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.5 bits;  conditional E-value: 0.0018
     DUF2451  31 llpekkrglleeFyeqtvsavadlrepiy.kavasrllnleslleaianvkWdvkevatehssYv 94 
                 ll   ++g+l +F+   v+++ dlr+  +  ava+rl + + ++ +i+n++ + ++ + + s Y 
  KHJ35371.1 114 LLARFHNGMLYRFLRGSVTSTTDLRKQEVwLAVARRLAEWHAVVPCIQNIDGKSNNYSEQYSVYQ 178
                 55556789999**************9977699******************999999999999985 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.014
     DUF2451 175 vpnleyveeYIkayylp 191
                  + +++++eYIk yy  
  KHJ35371.1 317 SQRIDFIREYIKSYYRH 333
                 57899**********55 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (421 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      531  (0.0296168); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.53u 0.25s 00:00:00.78 Elapsed: 00:00:00.40
# Mc/sec: 3169.50
//
Query:       KHJ35372.1  [L=582]
Description: putative amino acid permease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.9e-124  415.9  41.8   2.2e-124  415.7  41.8    1.0  1  AA_permease    Amino acid permease
    3.3e-35  121.7  43.2    4.4e-35  121.3  43.2    1.1  1  AA_permease_2  Amino acid permease


Domain annotation for each model (and alignments):
>> AA_permease  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  415.7  41.8  2.5e-128  2.2e-124       1     473 [.      80     539 ..      80     544 .. 0.95

  Alignments for each domain:
  == domain 1  score: 415.7 bits;  conditional E-value: 2.5e-128
  AA_permease   1 hvlvialggviGtglfvglgvvlsqaGplgallayllagvviflvmlslgeiatngpksggfytyasrflgpelGfviGlnylfswitvlaleltaas 98 
                  h+++ia+gg iGtglf+ +g +l+++Gp+++l+a++l  +v+f+vm++lge+a+++p++g+f+++a+rf++p++Gf+ G+ y ++w + ++l+++ a 
   KHJ35372.1  80 HIQMIAIGGSIGTGLFIVSGTALATGGPGSLLIAFILLSIVLFCVMQALGEMAVAFPVAGSFSAFATRFIDPAWGFAFGWTYALLWTFIFPLQIISAT 177
                  9************************************************************************************************* PP

  AA_permease  99 iliqfwelvtdlpkawvtgavflvvlliinlvgvkvygeaefilalikiiaiiafiivgiillaggkpnkga.gfrflgdngsifknnlppgfakeee 195
                    +q+w  ++ +p  wv  + fl+++++inl++vkvyge+e+ +a++k+ a+++fii+g+i+++ g +  g+ g +++ ++g+     + +g      
   KHJ35372.1 178 TSLQYW--NSPIP-GWVATTGFLLLIITINLFNVKVYGEIEYTFAILKVTAVVGFIILGAIINCAGTQDSGYiGTQYWRNPGA-----FNNG------ 261
                  ******..*****.*********************************************************************.....****...... PP

  AA_permease 196 gafknfisvfvivvfaftGielvaiiagEvkdPeksiPkailqvviritifYvlsllligllvprndlgllndsasa....aspfvifikesgvsvla 289
                    fk+f++v+v + f+ftG+e  a++a+E+++P+k+ Pkai+q+++ i+i+Y++ +++igllvp+n+++l    ++     aspf+i+i+++g+++l 
   KHJ35372.1 262 --FKGFCGVLVEATFSFTGFEQMALAAAETQNPSKAFPKAIKQAFWHIAILYTITIMMIGLLVPYNSPQLSP--VDDidikASPFIIAIQSAGIIGLD 355
                  ..******************************************************************9975..22244569**************** PP

  AA_permease 290 plinaviltaalssansslysasRvlyslakdglaPkvlkkvskrgvPlraillsmiisllalllaslnlaapivfnfllaisaliglivwlliilsy 387
                  +++n +i++a+ls+anss+y a+R++ +la+++ aP+++++v+++g+Pl+ i l+++++l a++ + +      +fn+ll++s++ +++ w++i++++
   KHJ35372.1 356 SVMNTIIIIAVLSVANSSMYGATRTFAALAEQDQAPRFMAYVDQKGRPLVNIGLVSLFGLTAFIYETSLRH--MAFNWLLTLSGVTTILSWCSICYTH 451
                  ***************************************************************77777777..************************* PP

  AA_permease 388 lrfRkalkyqgrsieelgfkaallplgvilvlaaliiillilalyay......ltvkkgpkdwgaasfaaaylivllfliilvgvklhvknk 473
                  + fR+a+ yqg + ++l + +++++ g+++++++li+il++++++a       ++ ++   +  a+ f  ay++v+++li+++g+kl++++ 
   KHJ35372.1 452 ISFRRAWIYQGLHQNDLIYCSPTGISGSYFGIFSLILILVAQFWVAAsqeeedVQ-RA---TDCAVKFSGAYSTVPIILILYFGYKLWYRTQ 539
                  *********************************************9944443322.22...224788999*******************986 PP

>> AA_permease_2  Amino acid permease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.3  43.2     5e-39   4.4e-35       8     407 ..      83     498 ..      79     528 .. 0.81

  Alignments for each domain:
  == domain 1  score: 121.3 bits;  conditional E-value: 5e-39
  AA_permease_2   8 alvigsvigsgifvkn..laasggpalilwvwiavligslavllvyaElssalprsgGiyvytkaafgkkvaflsawfnwfayvpvlasilsvaas 101
                    +++ig  ig+g f+++  ++a+ggp ++l+ +i   i++++v+ ++ E++ a+p  g  + ++ +++ + ++f ++w++++ + + +++ +++a+ 
     KHJ35372.1  83 MIAIGGSIGTGLFIVSgtALATGGPGSLLIAFILLSIVLFCVMQALGEMAVAFPVAGSFSAFATRFIDPAWGFAFGWTYALLWTFIFPLQIISATT 178
                    689**********9999988889998888888888888899*********99******************************************** PP

  AA_permease_2 102 yllnalgpdlqgntwltyliaiaililvalinirgikesakiqnilgilkillpliiliilglitvdgggfssl...stetdt..ffpngwpgvll 192
                    +l+++ ++ + g+     +   ++l+l+++in++++k ++ i  + +ilk++  ++ +iilg i+ ++g+++s    ++ + +   f+ng +g+ +
     KHJ35372.1 179 SLQYW-NSPIPGW-----VATTGFLLLIITINLFNVKVYGEIEYTFAILKVT-AVVGFIILGAIINCAGTQDSGyigTQYWRNpgAFNNGFKGFCG 267
                    ****5.5445666.....455569***************************5.7788888999999*****9888775555556688889999999 PP

  AA_permease_2 193 gllivlwsfdGfesaanvseevkk..kdvpkaifigllivlvlyllvniaflgvvpddei.....anlsnlgsvaalffeavggkvvaiivvilia 281
                    +l  +++sf+Gfe  a  + e ++  k +pkai  ++  +++ly+ + + +   vp ++      + ++   s++ +  + +g   + ++++ +i+
     KHJ35372.1 268 VLVEATFSFTGFEQMALAAAETQNpsKAFPKAIKQAFWHIAILYTITIMMIGLLVPYNSPqlspvDDIDIKASPFIIAIQSAGIIGLDSVMNTIII 363
                    9999*****************6666699*****888888888888876666666666665333332222244469999999997799********* PP

  AA_permease_2 282 lsllgaintavigssrvlealardgvlPrffakvnkfgspiraiiltaivslillllfllas..saaynfllsvsslgliisyllliigalilrkk 375
                    +++l  +n+ ++g++r++ ala+++  Prf+a v+++g+p++ i l+ ++  + ++++  +s    a+n+ll++s +  i+s++ +  + +  r+ 
     KHJ35372.1 364 IAVLSVANSSMYGATRTFAALAEQDQAPRFMAYVDQKGRPLVNIGLVSLFG-LTAFIYE-TSlrHMAFNWLLTLSGVTTILSWCSICYTHISFRRA 457
                    ********************************************9999999.4433332.2367999****************9988777766644 PP

  AA_permease_2 376 rphlkr..........pgkilvaiigalfllfllvalffppk 407
                     ++++           p  i  + +g+++l+++lva f++ +
     KHJ35372.1 458 -WIYQGlhqndliycsPTGISGSYFGIFSLILILVAQFWVAA 498
                    .33311233458555533343444446666666666666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (582 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 4389.62
//
Query:       KHJ35373.1  [L=434]
Description: putative integral membrane [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.21s 00:00:00.67 Elapsed: 00:00:00.36
# Mc/sec: 3659.00
//
Query:       KHJ35374.1  [L=1239]
Description: putative synaptojanin 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.5e-73  245.6   0.0    1.5e-72  244.7   0.0    1.5  1  Syja_N         SacI homology domain
      2e-07   30.8   0.0    6.3e-07   29.1   0.0    1.8  2  Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family


Domain annotation for each model (and alignments):
>> Syja_N  SacI homology domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  244.7   0.0   1.6e-76   1.5e-72       1     320 []      78     426 ..      78     426 .. 0.82

  Alignments for each domain:
  == domain 1  score: 244.7 bits;  conditional E-value: 1.6e-76
      Syja_N   1 ygilGlirllsgsyllvitkreevgtlkgkkeiykitevellpls..seeeaekalkslkakt.......ekkkeeke.....leekllklleklfess 85 
                 +g lGli+++++ +++v+t++++v++++ +++  ki  ve+++l+  +++++ k++++++  +       +             +e+ ++ l++l++ +
  KHJ35374.1  78 HGTLGLITVNNNIFICVVTGATRVASVRPGETAEKIYGVEFYCLNtsNYDNSPKEVSDQN--NledgflaN------IrgkelSQEHPCADLQRLLC-D 167
                 799***********************99888999*********96223333333333322..133555441......03444434445666767775.9 PP

      Syja_N  86 gsfYFsydlDltrslqrqlekssesskslplweraderFvWNrhllkpli.........ea...eldswllpviqGfveqsklkls..ksqke...kek 167
                 gsfYFs d+Dlt++lq++  +     ++l  ++++d++F+WN+++++pli         e+   + ++ l++ i+Gf+ +  +++s  +       +++
  KHJ35374.1 168 GSFYFSTDVDLTNRLQDRDIEV----NNL-DIDHMDTDFLWNSFMINPLIkfrsqllrsERknlDSSRTLTSAIRGFIMTLMIPSSpsS---LlneENG 258
                 9***************999863....222.24678*************9977777766611567899***********88888776441...1445888 PP

      Syja_N 168 kevtltlisRrsrkraGtRylrRGiddeGnvANfvEtEqileves.......sekeskilSfvqiRGSiPlfWsqeptlky.kpkirierseeenleaf 258
                    +ltlisR s++raGtR+++RGidd+GnvANfvE+E + ++          e+++ ++S+vqiRGS+P+fW+q   l   ++ki+++rs e +l+ f
  KHJ35374.1 259 APSSLTLISRLSCRRAGTRFNSRGIDDDGNVANFVESEIVYYSPLvnsllgdVEPSGICFSYVQIRGSVPIFWEQAAGLIPgQQKITMTRSPEGTLPSF 357
                 999************************************988444788999978889********************98768***************** PP

      Syja_N 259 kkHfekllkrYgkvvvvnLl.ekkgrEkkLgeayekavkklnkle.......kekkklkyveFDfhkeck 320
                  kHf++l ++Yg v++vnLl e+k +E +L + y+kavk+ ++ +        + + lk +eFDfh+e+k
  KHJ35374.1 358 HKHFSELERKYGLVHIVNLLsENKASELELANLYRKAVKNAKD-KwskenyfLDPQFLKQTEFDFHAETK 426
                 ********************98899****************96.3468999977799**********987 PP

>> Exo_endo_phos  Endonuclease/Exonuclease/phosphatase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.18   1.6e+03      66      86 ..     424     444 ..     376     515 .. 0.62
   2 !   29.1   0.0     7e-11   6.3e-07       1     233 []     629     913 ..     629     913 .. 0.72

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.18
                    CSSSTTSSEEEEEECSTEEEE CS
                    xxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  66 gggggggnggavlsrfpltsl 86 
                       g gg+  a+l+r+ ++s 
     KHJ35374.1 424 ETKGPGGYESATLIRRLIKSS 444
                    2338999999******99877 PP

  == domain 2  score: 29.1 bits;  conditional E-value: 7e-11
                    EEEEESTG....CHHHHTHHHHHHHHHHHHHHC......TT..SEEEEEEEBSCTCHHHHHHHHH...............TTCEEEEECCH..... CS
                    xxxxxxxx....xxxxxxxxxxxxxxxxxxxxx......xx..xxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxx..... RF
  Exo_endo_phos   1 ltwNvngq....aspalgssrrsdrladlltay......da..DvlgLQEvdddelsriplllal...............ggflgasstsp..... 64 
                    +t+N+ng     +           +l  +l  +       +   + g+QE+   + + i+                    +               
     KHJ35374.1 629 GTFNLNGRnistEY----------DLSPWLFPSldhtqeSPeiVATGFQEIVELSPQQIMNSDPKrkeaweklvldtinkK---------Eklngn 705
                    69999997655322..........27777744444444433445556***5555555554444226666555444444440.........155555 PP

                    .....................................ECSSSTTSSEEEEEECSTE..EEEEEEEEEETSSSSGCEEEEEEEEEEEEEEECCCHHG CS
                    .....................................xxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos  65 .....................................tgggggggnggavlsrfpl..tslfrrtfiefndlvaalrreplaakleqlniashrdh 121
                                                         tg+ g  gn+gav++r+    t +                                   
     KHJ35374.1 706 eyyvmlrsgqligaslmifvkksalfnirnvegsvlkTGMSGMAGNKGAVAIRMDYadTPI----------------------------------- 766
                    555566777788888888888888889999999999********************98666................................... PP

                    HHHHHHHHHHHHHHHHHHHHHTTSEEEE.........................................EEE-SSSTSGGGBSCGHHHHHHCTTTH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxx.........................................xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Exo_endo_phos 122 dlvrdlqllalllqvealnadrgapviv.........................................aGDfNarpsdddsrvlrtrglalapap 176
                                             ++v                                         +GDfN+                     
     KHJ35374.1 767 -------------------------CFVtahfaagfknyeernnnfatinhslrfqrnrgindhytviwMGDFNY--------------------- 816
                    .........................66666666666666666666666666666666666666666666******..................... PP

                    HSSCESCETTTTTTTTTTTEB-B......................................................................EEE CS
                    xxxxxxxxxxxxxxxxxxxxxxx......................................................................xxx RF
  Exo_endo_phos 177 vglyllgggptptyvtraggsrl......................................................................Dri 202
                                         r+                                                                      Dri
     KHJ35374.1 817 ---------------------RIaldneivrnlikneeidilfqndqlnlqmiaglvfpsyseskitfaptykfdvgtntydtseksripawtDRI 891
                    .....................99999999999999999999999999999999999999999999999999999999999999999999******* PP

                    EEECHHHCCEEEEEEECCHHEEC...TSSCSSSB CS
                    xxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxx RF
  Exo_endo_phos 203 laspalalfrsgvlppplalvrr...ealtlSDH 233
                    l +++ +++             +    +l +SDH
     KHJ35374.1 892 LLKGENTRQI------------CynsAPLQFSDH 913
                    ***7333333............244446678999 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1239 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       664  (0.037035); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.77u 0.26s 00:00:01.03 Elapsed: 00:00:00.41
# Mc/sec: 9034.58
//
Query:       KHJ35375.1  [L=272]
Description: hypothetical protein EV44_g3271 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    0.00048   19.8   1.5     0.0012   18.5   1.5    1.7  1  zf-C2H2_10  C2H2 zinc-finger
  ------ inclusion threshold ------
      0.076   12.3   0.6       0.11   11.8   0.6    1.2  1  PPL5        Prim-pol family 5


Domain annotation for each model (and alignments):
>> zf-C2H2_10  C2H2 zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   1.5   1.4e-07    0.0012       3      20 ..      57      74 ..      56      77 .. 0.90

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 1.4e-07
  zf-C2H2_10  3 kitCSYChetGHtRAkCe 20
                +++C YC+  GH R +C+
  KHJ35375.1 57 NKKCAYCNRRGHLRESCF 74
                79************9997 PP

>> PPL5  Prim-pol family 5
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.6   1.2e-05      0.11     202     261 ..      86     148 ..      48     152 .. 0.63

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 1.2e-05
        PPL5 202 kklkkktsrkkkkegkkekesek.eeededeeddlsdlvnvvegs..saaakkkkvvafqDyr 261
                 k ++k+ ++ +kk++ kek+s +  e +++++++ s   ++v+++   aa+k++k+ af+++r
  KHJ35375.1  86 KWSTKNPKKAAKKHKLKEKSSRRrGEAKKNSRNNSSINTRIVDDTkhGAANKVNKIAAFEEWR 148
                 23333333333333333333333034455555556666788887755677788********99 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (272 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1136  (0.063361); expected 358.6 (0.02)
Passed bias filter:                      459  (0.025601); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1962.04
//
Query:       KHJ35376.1  [L=106]
Description: hypothetical protein EV44_g5933 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (106 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       332  (0.0185175); expected 358.6 (0.02)
Passed bias filter:                      259  (0.0144459); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.26s 00:00:00.60 Elapsed: 00:00:00.38
# Mc/sec: 829.77
//
Query:       KHJ35377.1  [L=261]
Description: hypothetical protein EV44_g3810 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       724  (0.0403815); expected 358.6 (0.02)
Passed bias filter:                      529  (0.0295053); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.21s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2015.66
//
Query:       KHJ35378.1  [L=1268]
Description: putative ubiquitin carboxyl-terminal [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.5e-42  143.6   2.2    1.8e-40  139.1   2.2    2.4  1  UCH       Ubiquitin carboxyl-terminal hydrolase
    1.5e-35  120.9   6.0    2.8e-11   43.2   1.0    5.9  5  RPT       A repeated domain in UCH-protein
    2.1e-07   30.9   6.7    2.1e-07   30.9   6.7    2.3  2  UCH_1     Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.1   2.2   3.1e-44   1.8e-40       2     257 .]     620    1195 ..     619    1195 .. 0.90

  Alignments for each domain:
  == domain 1  score: 139.1 bits;  conditional E-value: 3.1e-44
                  EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.........TT.TTS.TTH..........HHHHHHHHHHHHHSH-CCEE--.. CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxx.. RF
         UCH    2 GlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkel........nesnplgkkge..........lakalkdlfkellkskskavsP.. 78  
                  Gl N+GntCy+ns+lQ+++s+++lr+++l+  +   + +++ +l        +                    ++++l++lfk l    +++v P  
  KHJ35378.1  620 GLDNIGNTCYLNSLLQYYYSVKPLREMVLDFDKYRMVLNDE-NLrrkkvggrQ---------VeeaevvkaqkFVEELQKLFKRLKTAPTRSVRPtk 706 
                  9**************************99964443333222.22223345542.........03445555555*************8899******* PP

                  ................................................................................................. CS
                  ................................................................................................. RF
         UCH   79 ................................................................................................. 78  
                                                                                                                   
  KHJ35378.1  707 elaaltifstqaaeqaarnysiegskilqnndqnqfdigsgtqwsspnsvtenevemienvnekipgrddnsseitlvdaislsynscevendktll 803 
                  ************************************************************************************************* PP

                  ........................................................HHHHHHHHHHSGGGTSSSTCEHHHHHHHHHHHHHHHHCCHC CS
                  ........................................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH   79 ........................................................kklkktlsklaksfsgykqqDaqEflaflLdqlhedlnrev 119 
                                                                          kk     ++ ++    ++qqD++E++ ++L +l+ ++ +  
  KHJ35378.1  804 shqiiqnkyqkkqnmsdfeadtvmvnnifqevkpipptperpspalpndmadifgpKKKSCQSDSDNRAWDFGTQQDVTEVIGNVLFRLQCAITA-- 898 
                  ***********************************************9999999875545555555666779*********************99.. PP

                  CCHHHHHHCCCTTSHHHHHH-EEEEE......................................................EEEEEEB-SEEEEEEES CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxx......................................................xxxxxxxxxxxxxxxxx RF
         UCH  120 aeekwkkhlkrndslitdlfegqlks......................................................klklkrlPeiLiihlkR 162 
                       + ++ ++ ++i + f g  +                                                        +++++lP+i+++h++R
  KHJ35378.1  899 --IDYETTSGEQIDIIRESFFGANTVytqkahslqkkveawsyilvfpnpnesvprsiyealdvsfdeqlveidkqlvpqFTSISKLPRIMQFHIQR 993 
                  ..3347778888888888887776667788899999999999999999999999999999999999*************9899************** PP

                  EEETEE...EEE--SEEB--SEEE-GGGBSS-BTTS-TCS-B....................................................... CS
                  xxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................................................... RF
         UCH  163 fsynss...ksKlntkvefpeeldlssylaeekkkkteekkk....................................................... 201 
                    ++++   + K++++v++pe+l+l++y++++++ + +   +                                                       
  KHJ35378.1  994 TAFDQEslrSWKNRSPVTIPETLYLDRYIDDSNTLDSSIMSRrrqtwlwkkqlsklearyevltndkkitpsdallatrdlvndireepidgisidn 1090
                  ***99999999******************9888887665555999**************************************************** PP

                  ..........................................EEEEEEEEEESCTTSEEEEEEEECTTTTEEEEEETTEEEEE-HH......CCCTT CS
                  ..........................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxx RF
         UCH  202 ..........................................YeLiavvvHsGslssGHYvayiknekngkWykydDetvkevkee......eevls 250 
                                                            Y L+av++H+G++++GHY++yi + +n  W++y+De+v++v++       e+v++
  KHJ35378.1 1091 dfprlldiridelgmeideikneigilqeklqnqfidmrnheYTLHAVFIHHGEVGGGHYWVYIYDAENDIWRQYNDESVSQVRNRdyifkhESVSE 1187
                  *****************************************************************9******************8866655434444 PP

                  .CEEEEEE CS
                  .xxxxxxx RF
         UCH  251 .sayiLfY 257 
                   s+y  +Y
  KHJ35378.1 1188 gSPYYVVY 1195
                  88888777 PP

>> RPT  A repeated domain in UCH-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0     0.091   5.4e+02      35      50 ..     217     232 ..     211     232 .. 0.87
   2 !   16.0   0.0   1.5e-06    0.0088       6      55 ..     346     395 ..     346     398 .. 0.94
   3 !   43.2   1.0   4.6e-15   2.8e-11       2      55 ..     412     467 ..     411     470 .. 0.92
   4 !   18.8   0.0   1.9e-07    0.0011       1      49 [.     476     522 ..     476     523 .. 0.97
   5 !   38.6   0.1   1.2e-13   7.3e-10       1      58 [.     545     604 ..     545     605 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.091
         RPT  35 kdklrrALkvIAeeRk 50 
                 + +l+ AL++I+e Rk
  KHJ35378.1 217 ASYLKDALSTIGEPRK 232
                 5689********9997 PP

  == domain 2  score: 16.0 bits;  conditional E-value: 1.5e-06
         RPT   6 yklLgidentdDdviitayqvkleddpsqkdklrrALkvIAeeRkSelLl 55 
                 y+ Lg+ e  +D+++  ay  + e dps+k ++  +L   A  R+S+ L+
  KHJ35378.1 346 YASLGAVEGFTDELLAWAYDRQCECDPSNKPYYLDCLDDLARGRNSYYLQ 395
                 7789999999*************************************997 PP

  == domain 3  score: 43.2 bits;  conditional E-value: 4.6e-15
         RPT   2 veeAyklLgi..dentdDdviitayqvkleddpsqkdklrrALkvIAeeRkSelLl 55 
                 +eeAy+++++  ++  +Dd+ii+ y+++++ +p  k+ ++ +L++IA++R+S+ L+
  KHJ35378.1 412 IEEAYNYFELssNSRESDDYIISLYRARIALAPRLKEMAQSCLEKIAKHRNSSTLE 467
                 69*******8645559*************************************997 PP

  == domain 4  score: 18.8 bits;  conditional E-value: 1.9e-07
         RPT   1 dveeAyklLgidentdDdviitayqvkleddpsqkdklrrALkvIAeeR 49 
                 +++eA+k+Lg++++t  ++i + + v + d  ++k k   ALk+IA+e+
  KHJ35378.1 476 TYDEALKYLGVNSETAPEFIEASAVVMFVD--GDKSKVALALKTIAKEK 522
                 79**************************99..**************986 PP

  == domain 5  score: 38.6 bits;  conditional E-value: 1.2e-13
         RPT   1 dveeAyklLgi.dentdDdviitayqvkleddp.sqkdklrrALkvIAeeRkSelLlnfL 58 
                 ++++Ayk L+i +++++D+ +++++q+  + ++ +++d + +AL+vIA +R+S  L+  L
  KHJ35378.1 545 SINDAYKRLQIsSHEISDEGVLNYFQSLSNGAAaGSRDSFIEALQVIALDRNSHFLFAKL 604
                 689********5555***********99999777**********************9877 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.51   3.1e+03      63     145 ..     216     322 ..     212     344 .. 0.57
   2 !   30.9   6.7   3.5e-11   2.1e-07       2     319 ..     620    1169 ..     619    1170 .. 0.74

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.51
                 xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx..............................xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  63 qasnFlralssipeasalglileee.eetekssaislssli..............................qsfnrflldqlekelketkknsseeesa 130
                 +as++  als+i e  ++ l  +++ +    s a++++ l                               ++f + +l+++++ + e+++   + +++
  KHJ35378.1 216 LASYLKDALSTIGEPRKIALR-NKKfTL---SFANDCTDLFkyldftysddqteegesnffwglpritdqnRNFIQDVLEEINYRAYEMQT---SPKQT 307
                 567777777777777777774.332222...222333333344445555555555555555566655553345777777777777666654...45555 PP

                 xxxxxxxxxxxxxxx RF
       UCH_1 131 ieqllgtkaettirc 145
                 +++ l+++a ++i+ 
  KHJ35378.1 308 LQSSLTVSAMNQIKI 322
                 666676777777665 PP

  == domain 2  score: 30.9 bits;  conditional E-value: 3.5e-11
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxx....................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1    2 GLEnhivnsYlNslLQvlyfipplrnlalshlak..eckke....................hcLlcElgflfdmldkakglncqasnFlralssipe 76  
                  GL+n  +++YlNslLQ +y ++plr+++l   +     ++e                    ++ + El+ lf+ l++a +++++ +  l al+ +++
  KHJ35378.1  620 GLDNIGNTCYLNSLLQYYYSVKPLREMVLDFDKYrmVLNDEnlrrkkvggrqveeaevvkaQKFVEELQKLFKRLKTAPTRSVRPTKELAALTIFST 716 
                  9********************9999655543333113334488999999999999999999********************************6665 PP

                  xxxxxxxxxxx.xxxx............................................xxxxxxxxxxx.........xxxxxxxxxxxxxxxxx RF
       UCH_1   77 asalglileee.eete............................................kssaislssli.........qsfnrflldqlekelke 119 
                  ++a +  ++++ e ++                                            +ss+i+l   i         ++ ++ l +q+ ++  +
  KHJ35378.1  717 QAAEQAARNYSiEGSKilqnndqnqfdigsgtqwsspnsvtenevemienvnekipgrddNSSEITLVDAIslsynscevENDKTLLSHQIIQNKYQ 813 
                  5555554444422222555555556677777777777666666666666666666666663333443333366666666545666666676666555 PP

                  xxxxx.......................................................................................xxxxx RF
       UCH_1  120 tkkns.......................................................................................seees 129 
                  +k+n                                                                                         e+ +
  KHJ35378.1  814 KKQNMsdfeadtvmvnnifqevkpipptperpspalpndmadifgpkkkscqsdsdnrawdfgtqqdvtevignvlfrlqcaitaidyettsGEQID 910 
                  55544777788888888888888888888********************************999999999999999999888888888888766667 PP

                  xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  130 aieqll.gtkaettirclkCgseksrksstlvldlkyPkpsnekkeakvtfasilksslerekttrawCekCkryqpteqrktvknlPpvLalnakl 225 
                  +i + + g +++ t++    + +k+ +  +++  l+ P+p   +++   ++ + l  s+++     + +e+   +q + q  ++ +lP+++ ++ ++
  KHJ35378.1  911 IIRESFfGANTVYTQKAH--SLQKKVEAWSYI--LVFPNP---NESVPRSIYEALDVSFDE-----QLVEI--DKQLVPQFTSISKLPRIMQFHIQR 993 
                  776665133333333333..223333333333..455533...34455699********99.....89999..5578889999*************9 PP

                  x.xxx.xxxxxxx..................................................................................xx RF
       UCH_1  226 e.eee.elelwkt..................................................................................kn 238 
                  +  ++ +l+ wk+                                                                                  +n
  KHJ35378.1  994 TaFDQeSLRSWKNrspvtipetlyldryiddsntldssimsrrrqtwlwkkqlsklearyevltndkkitpsdallatrdlvndireepidgisiDN 1090
                  987754999******************************************9999999999999999999999999999999999999999999856 PP

                  xxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1  239 wlpleiklsldedknl...........eeklkeerekakaekeikvYeLqsvvvhigdskesghLvslvkvaekelerdppesqWylFNDfl 319 
                   +p+ +++++de +++           +  +k +++    + +   Y L++v +h g+ +  gh+  ++          ++++ W   ND +
  KHJ35378.1 1091 DFPRLLDIRIDELGMEideikneigilQ--EKLQNQ--FIDMRNHEYTLHAVFIHHGEVG-GGHYWVYIYD--------AENDIWRQYNDES 1169
                  6665555555555555666655555332..222222..34566789***********555.9***999983........3346677777755 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1268 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       930  (0.0518713); expected 358.6 (0.02)
Passed bias filter:                      570  (0.0317921); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.84u 0.30s 00:00:01.13 Elapsed: 00:00:00.48
# Mc/sec: 7897.72
//
Query:       KHJ35379.1  [L=1418]
Description: putative smc n terminal domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      9e-74  247.6  22.7    5.6e-37  127.3   3.6    3.7  2  SMC_N            RecF/RecN/SMC N terminal domain
    6.2e-22   78.1   0.0    2.4e-21   76.2   0.0    2.2  1  SMC_hinge        SMC proteins Flexible Hinge Domain
      9e-12   45.9   3.8      9e-12   45.9   3.8    7.1  6  AAA_23           AAA domain
    2.7e-09   37.3  24.8      1e-05   25.6   1.1    5.1  4  AAA_21           AAA domain, putative AbiEii toxin, Type IV T
    2.2e-06   27.6  22.4    2.2e-06   27.6  22.4    5.2  4  AAA_15           AAA ATPase domain
    8.3e-05   22.3   0.0    0.00018   21.2   0.0    1.5  1  AAA_29           P-loop containing region of AAA domain
  ------ inclusion threshold ------
       0.32   11.3   2.3         30    4.9   0.0    4.0  4  AAA_22           AAA domain
       0.45   11.0   0.0       0.45   11.0   0.0    6.4  6  ABC_tran         ABC transporter


Domain annotation for each model (and alignments):
>> SMC_N  RecF/RecN/SMC N terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.7  11.2   3.1e-39     7e-36       2     144 ..     210     881 ..     209     902 .. 0.90
   2 !  127.3   3.6   2.5e-40   5.6e-37      70     219 ..    1039    1401 ..     978    1402 .. 0.86

  Alignments for each domain:
  == domain 1  score: 123.7 bits;  conditional E-value: 3.1e-39
                 EEEEEEESETTEECEEEEEETTSSEEEEEESTTSSHHHHHHHHHHHCTT.TTTTTTCHCCCCCC--BTTCSSTTEEEEEEEE....EETTEE.....SS CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxx.....xx RF
       SMC_N   2 lkrleienFksyagktvilpfsksftaivGpNGSGKsnlldAilFvLGersakklrseklsdlihkskekasvkkaeveitf....dnedkk.....lk 91 
                 ++ l+++nFksya+++ ++pf++sft++vGpNGSGKsn++d++lFv+G+r++ k+r+ k+s+lih+s++ ++++++ev+++f    d    +     + 
  KHJ35379.1 210 ITYLILTNFKSYAERQEVGPFHTSFTSVVGPNGSGKSNIIDSLLFVFGFRAS-KMRQGKISALIHNSAAFPNLDFCEVAVHFqevmD----QpngstEI 303
                 77899********************************************988.*****************************55552....43444588 PP

                 SSSSCEEEEEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT....................................................... CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................................................... RF
       SMC_N  92 iekeevsisrrvkrkgeseykingkevtkkevsellesagiske....................................................... 135
                 i +++++isrr++++++s+y++ngke +++ v+ ll++ gi+ +                                                       
  KHJ35379.1 304 IPNSDLVISRRAFKNNSSKYYLNGKESNFTAVTALLRDRGIDLDhkrflilqgevesiaqmkpkaanehddglleylediigtskykkpieesasqvei 402
                 99*****************************************99999999999999999999999999999999999999999999999999999999 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
       SMC_N 136 ................................................................................................... 135
                                                                                                                    
  KHJ35379.1 403 lnelcleksgrvhhvekeknsledkknkalayirdenelvtkqsalyqiyvdecsnnmgiteeaitqllsqlnkellkhqgkeneikkicklyengqke 501
                 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
       SMC_N 136 ................................................................................................... 135
                                                                                                                    
  KHJ35379.1 502 yeiiekeaqliakqmaqsdrehikfeekkkflvnkqkkteknihdsktaaveaqetiencgleieklckkisemeeqmkvekyeldsireslkgktqvf 600
                 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
       SMC_N 136 ................................................................................................... 135
                                                                                                                    
  KHJ35379.1 601 sdqiaekqkylepwnakisqinsaiavaeselsiihekanasavaleeskakissikndreaklielenskaqraklelhasriqselnqllsqeqeir 699
                 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 PP

                 ................................................................................................... CS
                 ................................................................................................... RF
       SMC_N 136 ................................................................................................... 135
                                                                                                                    
  KHJ35379.1 700 knlstarqkadearaslsntqtqgnvltglmrlkesgridgfngrlgnlgtisqkydvaistacgalnnfvtdtvegaqqcieylrktnlgrgnfmcld 798
                 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 PP

                 ..........................................................................CS-HHHHHH CS
                 ..........................................................................xxxxxxxxx RF
       SMC_N 136 ..........................................................................lLSgGektL 144
                                                                                           ++SgG  t+
  KHJ35379.1 799 kigirdmgaietpenvprlfdlinakdekfrpafyhslqntlvardlaqanriaygakrwrvvtldgqlidksgTMSGGGNTV 881
                 99999999999999999999999999999999999999999999999999999999999999999999999999899887776 PP

  == domain 2  score: 127.3 bits;  conditional E-value: 2.5e-40
                  TCSSTTEEEEEEEEEETTEESSSSSSC..EE.EEEEEETTSEEEEEETTEEE-HHHHHHHHHCTT-STT............................ CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxx..xx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................ RF
       SMC_N   70 ekasvkkaeveitfdnedkklkiekee..vs.isrrvkrkgeseykingkevtkkevsellesagiske............................ 135 
                   ++ ++ aev+    +++k+ ++++ +  v+  +    +  + e +in+++ + ++++e + +a+ + e                            
  KHJ35379.1 1039 LGETISAAEVNQAKAKKQKTKHEKSYSkaVEdFESATAELRNLELEINNQNENVQDYQEKVDEAQAKLEakkkelktlkadldeknsvlneiraiei 1135
                  4455555555554433333322221110111011222222335788888888888888888888877778888888888888899999999999999 PP

                  ................................................................................................. CS
                  ................................................................................................. RF
       SMC_N  136 ................................................................................................. 135 
                                                                                                                   
  KHJ35379.1 1136 emrngleenqkvltenrnqlkywtekleklnlqnvddleevteesspalpeytkdeladmckdtlkseiaaleektqntsvdlsvlaeyrrrveeya 1232
                  99999999***************************************************************************************** PP

                  .....................................................................................CS-HHHHHHHHH CS
                  .....................................................................................xxxxxxxxxxxx RF
       SMC_N  136 .....................................................................................lLSgGektLval 147 
                                                                                                       +LSgGektL++l
  KHJ35379.1 1233 irnkdlqnavtqrdaakkrcddlrhlrlqgfmegfttislrlkemyqmitmggnaelelvdsldpfsegilfsvmppkkswknisNLSGGEKTLSSL 1329
                  ************************************************************************************************* PP

                  HHHHHHHCCS--SEEEECTTTTTS-HHHHHHHHHHHHHHCTTSEEEEE-SSHHHCCC-SCEEEEEEEETTEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       SMC_N  148 aLlfAiqkvkpaplyllDeidaaLDeknvkkvaellkeksknaQfivislreemlekadklvgvtkvengvs 219 
                  aL+fA++++kp+ply++DeidaaLD++nv++va+++ke++knaQf+vislr++m+e a +lvgv+kv+n ++
  KHJ35379.1 1330 ALVFALHHYKPTPLYVMDEIDAALDFRNVSIVANYIKERTKNAQFLVISLRNNMFELATRLVGVYKVNNMTK 1401
                  ******************************************************************998875 PP

>> SMC_hinge  SMC proteins Flexible Hinge Domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.2   0.0   1.1e-24   2.4e-21       3     117 .]     740     852 ..     738     852 .. 0.96

  Alignments for each domain:
  == domain 1  score: 76.2 bits;  conditional E-value: 1.1e-24
   SMC_hinge   3 gvlGrladlievdegyekAveaalgnrlqalvvedeetakkiieflkkknagratflpldrikqknkadgandknsgavplidlvevdde.lrkalryl 100
                 g+ Grl++l ++ ++y++A+++a+g+ l+++v+++ e a+++ie+l+k+n+gr +f+ ld+i  +     ++++  ++ +l+dl++ +de +r+a+++ 
  KHJ35379.1 740 GFNGRLGNLGTISQKYDVAISTACGA-LNNFVTDTVEGAQQCIEYLRKTNLGRGNFMCLDKIGIRDMGAIETPE--NVPRLFDLINAKDEkFRPAFYHS 835
                 789*********************97.*************************************9999999998..6********************** PP

   SMC_hinge 101 lgdtlvvdsldeAeela 117
                 l++tlv+ +l++A+++a
  KHJ35379.1 836 LQNTLVARDLAQANRIA 852
                 **************986 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   2.3       3.1   6.9e+03     157     188 ..      30      68 ..       4     167 .. 0.57
   2 !   45.9   3.8     4e-15     9e-12       2     197 ..     213     476 ..     212     491 .. 0.74
   3 ?  -28.5  45.6         8   1.8e+04      70     164 ..     517     655 ..     465     734 .. 0.40
   4 ?   -6.2  18.5         8   1.8e+04      92     197 ..     911    1041 ..     822    1044 .. 0.61
   5 ?   -9.2  32.7         8   1.8e+04      86     192 ..    1014    1155 ..     971    1169 .. 0.44
   6 ?   -7.0  10.6         8   1.8e+04      76     188 ..    1134    1255 ..    1121    1261 .. 0.49

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 3.1
      AAA_23 157 elekeleeledekkllekl.......eqekekekeleel 188
                 e e e ++le++   + ++        ++k+ + + ++ 
  KHJ35379.1  30 EKEVENDDLEEDYTAISQKnhhkassSRRKSSKLNVQAQ 68 
                 222222222222222222222111111111111111122 PP

  == domain 2  score: 45.9 bits;  conditional E-value: 4e-15
      AAA_23   2 Lkienfrsf.rdqei.dFskgltlItGpNGaGKTTildAiklaLygetprlsrks..........grgfeksdveiese.................... 68 
                 L + nf+s+ ++qe+  F+  +t ++GpNG+GK+ i+d + ++++ ++++++ ++            +                               
  KHJ35379.1 213 LILTNFKSYaERQEVgPFHTSFTSVVGPNGSGKSNIIDSLLFVFGFRASKMRQGKisalihnsaaFPN----------Ldfcevavhfqevmdqpngst 301
                 7899*****87899868899******************************999986565555544222..........233344444447887777777 PP

      AAA_23  69 ....gkvkayveltfenkdgry..................................trsiererelskkkgkttkkakle.lleideleqfisellgsk 128
                     +++  + ++ f+n++ +y                                   +si ++++++ ++ +    + le ++++++ ++ i+e   s+
  KHJ35379.1 302 eiipNSDLVISRRAFKNNSSKYylngkesnftavtallrdrgidldhkrflilqgeVESIAQMKPKAANEHDDGLLEYLEdIIGTSKYKKPIEE-SASQ 399
                 77766666667777**999999******************999999999999988878888888888887777776654415566777777776.5666 PP

      AAA_23 129 kiilnlilflgqer.....feefelkdkkerleelekeleeledekkllekl..........eqekekekeleeleeeleeilk 197
                  +iln + + +++r     +e+++l+dkk++  +++++ +el ++++ l +           +       + e++ + l +++k
  KHJ35379.1 400 VEILNELCLEKSGRvhhveKEKNSLEDKKNKALAYIRDENELVTKQSALYQIyvdecsnnmgI-------TEEAITQLLSQLNK 476
                 667888888889999999988999999999999999999999888887777766666644441.......22233333333333 PP

  == domain 3  score: -28.5 bits;  conditional E-value: 8
      AAA_23  70 kvkayveltfenkdgry...trsiererelskkkgkttkkakle.lleideleqfise...llgskkiilnlilflgqerfeefel..kdkke...... 153
                  ++   +++fe k++     +++ e +++ sk+ +++ ++++++ +lei++l+++ise   +++++k +l+ i    +++++ f++  ++  +      
  KHJ35379.1 517 AQSDREHIKFEEKKKFLvnkQKKTEKNIHDSKTAAVEAQETIENcGLEIEKLCKKISEmeeQMKVEKYELDSIRESLKGKTQVFSDqiAE--Kqkylep 613
                 111223333333333112222222222222222222223332222333355555544444422222222222222222222222221111..0223333 PP

      AAA_23 154 ...............................rleelekelee 164
                                                +lee + ++  
  KHJ35379.1 614 wnakisqinsaiavaeselsiihekanasavALEESKAKISS 655
                 333344455555555555555555555555533333333333 PP

  == domain 4  score: -6.2 bits;  conditional E-value: 8
      AAA_23   92 rerelskkkgkttkkaklelleideleqfise.llgskkiilnlilflgqerfeefelkdkke............................rleele 159 
                  +      +  k +  +k+ ++  ++l+++i++   +++kiil+l +  ++ + +e +l    +                            + e+l+
  KHJ35379.1  911 Q------NFQKFQGRQKELEIALRDLNDQIPQlDTNIQKIILELESSAKDLSDAERRL----KelgkeyqpsgsdearvsslestiikfkvEFEKLR 997 
                  1......111111112333344444444444434445555444444433333222222....03333566677777777777777777777777777 PP

      AAA_23  160 keleeledekkllekl......eqekekekeleeleeeleeilk 197 
                   e    e e+k l+++      e++  ++++l++l+e+++++ +
  KHJ35379.1  998 GESASVESEIKSLQDKimevggEKLRVQKAKLDTLKENINTLGE 1041
                  77777777777777778888888888899999999999988755 PP

  == domain 5  score: -9.2 bits;  conditional E-value: 8
      AAA_23   86 y............................trsiererelskkkgkttkkaklellei..deleqfisellgskkiilnlilflgqerfeefelkdkk 152 
                                                   e ++ ++kk++ +  k+  + +e+  +++ ++ + +l++++++ n+ +++ + +++  +l++kk
  KHJ35379.1 1014 ImevggeklrvqkakldtlkenintlgetISAAEVNQAKAKKQKTKHEKSYSKAVEDfeSATAELRNLELEINNQNENVQDYQEKVDEAQAKLEAKK 1110
                  1233333333333333333333333323222222222222222222222233333334322233333345555555555555555556666667777 PP

      AAA_23  153 erleelekeleeledekkllekl.....eqekekekeleeleeel 192 
                  ++l+ l+ +l+e++ + +++++      + ++e++k l+e +++l
  KHJ35379.1 1111 KELKTLKADLDEKNSVLNEIRAIeiemrNGLEENQKVLTENRNQL 1155
                  777777777777777777666666555533333333333333333 PP

  == domain 6  score: -7.0 bits;  conditional E-value: 8
      AAA_23   76 eltfenkdgrytrsiererelskkkgkttkkaklelleideleqfisellgskkiilnlilflgqer........feefelkdkke.......rlee 157 
                  e++ +n  +++++ ++++r+  k  +++  k +l+++++ e   + s+    ++   +l +++++          ++        +        l+e
  KHJ35379.1 1134 EIEMRNGLEENQKVLTENRNQLKYWTEKLEKLNLQNVDDLEEVTEESSPALPEYTKDELADMCKDTLkseiaaleEKT-------QntsvdlsVLAE 1223
                  333333222224456666666666666666666666666332222222222222233444444444422222211222.......123444448888 PP

      AAA_23  158 lekeleeled.ekkllekleqekekekeleel 188 
                  +++  ee     k+l++++ q+   +k++++l
  KHJ35379.1 1224 YRRRVEEYAIrNKDLQNAVTQRDAAKKRCDDL 1255
                  88888886651444555556777777776665 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.3       3.9   8.7e+03      98     144 ..      18      64 ..       9      67 .. 0.75
   2 !   25.6   1.1   4.5e-09     1e-05       1     186 [.     234     394 ..     234     416 .. 0.56
   3 !    5.3   0.2    0.0064        14      66     207 ..     576     710 ..     556     739 .. 0.85
   4 !   17.0   5.0   1.8e-06    0.0041     124     296 ..    1153    1378 ..     945    1378 .. 0.65

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 3.9
      AAA_21  98 llldkrsleeedvfnpeargirggvsvfslkelsvsepndlqfgkal 144
                   + ++++  + ++  e ++  ++++  s+k++ ++++++++++k++
  KHJ35379.1  18 VESEEEDEQTWAEKEVENDDLEEDYTAISQKNHHKASSSRRKSSKLN 64 
                 55666666677777778888889999999999999999999888765 PP

  == domain 2  score: 25.6 bits;  conditional E-value: 4.5e-09
      AAA_21   1 lnvliGpNgsGKSnLLdaldllarldrdvegltdelsggggirkipslldlydpeipfefeieeflsqgvryryglrlersqveeklssvetllesgll 99 
                 ++ ++GpNgsGKSn++d l +++++ r +++++ + s   +++      +++ +  +++ ++   +++ ++ + ++  + + v                
  KHJ35379.1 234 FTSVVGPNGSGKSNIIDSLLFVFGF-RASKMRQGKISALIHNSAA----FPNLDFCEVAVHFQ-EVMDQPNGSTEIIPNSDLV---------------- 310
                 7889*******************95.3333333333222222222....22222233333333.2233333333333333333................ PP

      AAA_21 100 ldkrsleeedvfnpeargirggvsvfslkelsvsepndlqfgkaltditsrawsllllldglrke.rigllnifadyfgfakekrllq 186
                     + ++  + n+ +++  g +s+f + + ++ +  ++   k+++ +  + +s+++++ +  +e + gll++  d +g +k k+ ++
  KHJ35379.1 311 ----ISRRAFKNNSSKYYLNGKESNFTAVTALLRDRGIDLDHKRFLILQGEVESIAQMKPKAANEhDDGLLEYLEDIIGTSKYKKPIE 394
                 ....444555666666666666666666666666666666666666666666666666666666666666666666666666555555 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.0064
      AAA_21  66 lsqgvryryglrlersqveeklssvetllesgllldkrsleeedvfnpeargirggvsvfslkelsvsepndlqfgkaltditsrawsllllldglrke 164
                 ++q+++ +y+l+  r+ +    + + ++ ++ +  + + le +++++++   + +++ ++ ++ ++++++++   ++   +i+s +++ +  l +l   
  KHJ35379.1 576 EEQMKVEKYELDSIRESL----KGKTQVFSDQIAEKQKYLEPWNAKISQINSAIAVAESELSIIHEKANASAVALEESKAKISSIKNDREAKLIEL--- 667
                 455555666666666666....8888899999999999999*******************************999999999999999999999888... PP

      AAA_21 165 rigllnifadyfgfakekrllqrlvrslklveielsdlgegee 207
                 + + ++ ++ +++ ++++  l +l+++ ++++ +ls+ + + +
  KHJ35379.1 668 ENSKAQRAKLELHASRIQSELNQLLSQEQEIRKNLSTARQKAD 710
                 999999***************************9999975554 PP

  == domain 4  score: 17.0 bits;  conditional E-value: 1.8e-06
      AAA_21  124 vfslkelsvsepndlqfgkaltditsrawsllllldglrke..............rigllnifadyfgfakekrllqrlvrslklveielsdlgege 206 
                  +   ++ ++ e  +lq++++l ++t++ + +l++  +  ++              +  ++n + d+   a+ +r+++++  + k+  + ++  ++++
  KHJ35379.1 1153 NQLKYWTEKLEKLNLQNVDDLEEVTEESSPALPEYTKDELAdmckdtlkseiaalEEKTQNTSVDLSVLAEYRRRVEEYAIRNKDLQNAVTQRDAAK 1249
                  4444444444444444444444444444444444444333344444444444444444444444444444444444444444444444444444444 PP

      AAA_21  207 eliasvderlrer.......................................gvvflengdgqelparelSdGtkrll..alltallralkkgslll 262 
                  +  ++  ++ ++                                         ++ + +++  + ++++lS G k l   al+ al+   +  +l++
  KHJ35379.1 1250 KRCDDLRHLRLQGfmegfttislrlkemyqmitmggnaelelvdsldpfsegILFSVMPPKKSWKNISNLSGGEKTLSslALVFALHHYKPT-PLYV 1345
                  44444444444447777777777777777777777777777777777777777777777777788999*********655888888888888.**** PP

      AAA_21  263 iDEpEngLHPkllrrllellkelsrngaQviltT 296 
                   DE+++ L+ + ++ ++  +ke ++ +aQ+++ +
  KHJ35379.1 1346 MDEIDAALDFRNVSIVANYIKERTK-NAQFLVIS 1378
                  ********************99999.9***9876 PP

>> AAA_15  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   4.1         2   4.4e+03     141     185 ..      10      74 ..       1     187 [. 0.49
   2 !   27.6  22.4     1e-09   2.2e-06       3     279 ..     210     600 ..     209     623 .. 0.64
   3 ?  -11.0  29.5         8   1.8e+04      90     261 ..     500     700 ..     484     749 .. 0.40
   4 ?  -17.1  36.0         8   1.8e+04     147     283 ..     974    1130 ..     881    1180 .. 0.44

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 2
      AAA_15 141 kkskkelpkekeeklekekeelkidkedlkklikkleeslkkee.....................e 185
                 +k ++++ +e+ee+ e+  +e +++++dl++ +   +++++ ++                     +
  KHJ35379.1  10 RKTRRNIVVESEEEDEQTWAEKEVENDDLEEDYT-AISQKNHHKasssrrkssklnvqaqnsqirK 74 
                 4455555555555555555555555555555444.2222333332333322222222222222221 PP

  == domain 2  score: 27.6 bits;  conditional E-value: 1e-09
      AAA_15   3 IkkikikNFRslkd.vei.dlseeltvliGkNnsGKSsilealdlFlnnkekkn..........................................kkv 57 
                 I+ +++ NF+s+ +  e+ ++  ++t ++G+N+sGKS+i++ l + +    +k                                           +  
  KHJ35379.1 210 ITYLILTNFKSYAErQEVgPFHTSFTSVVGPNGSGKSNIIDSLLFVFGFRASKMrqgkisalihnsaafpnldfcevavhfqevmdqpngsteiipN-- 306
                 5668899******96444356666**********************997755557777777777777777766666665554444444444444440.. PP

      AAA_15  58 ikiekedleifeniseskdikIdvef......................................................................... 83 
                                                                                                                    
  KHJ35379.1 307 -------------------------Sdlvisrrafknnsskyylngkesnftavtallrdrgidldhkrflilqgevesiaqmkpkaanehddglleyl 380
                 .........................14444444456666666666666677777777777777777788999999999999999999999999999999 PP

      AAA_15  84 .....................aekekakeyektlkskekkkadlllkkkesdlkktikdkklklkknelsdekisvekkkskkelpke.keeklekeke 160
                                      +   ++   ek+ +    +k+++ l++k+++   +i+d++  + k+   ++++ +e  +++ + ++  ++  ++++ke
  KHJ35379.1 381 ediigtskykkpieesasqveI--LNELCLEKSGRVHHVEKEKNSLEDKKNKALAYIRDENELVTKQSALYQIYVDECSNNMGITEEAiTQLLSQLNKE 477
                 9999988988887665433330..233333333333344566667777888888888888888888888888887777777444444414455566666 PP

      AAA_15 161 elkid..kedlkklikkleeslkkeeelknvlksaiiklllisakRnvsdedsekkssllgklkekileealqekl......eeelteklkeiqeklke 251
                  lk++   +++kk+ k +e+  k++e + ++  ++i k    s++ +++ e+++k   ++ k++ek +++++   +      +e+   +++++ +k++e
  KHJ35379.1 478 LLKHQgkENEIKKICKLYENGQKEYE-IIEKEAQLIAKQMAQSDREHIKFEEKKKFLVNKQKKTEKNIHDSKTA-AveaqetIENCGLEIEKLCKKISE 574
                 66666778889999998888888888.44444444444444444445566888888888888888888875433.258776644444456666666666 PP

      AAA_15 252 idkklaeelkkilkkkidkikkfnykgk 279
                 +++++ + +k++l+++ ++  k++ +++
  KHJ35379.1 575 MEEQM-KVEKYELDSIRES-LKGKTQVF 600
                 66666.3333333333222.23333322 PP

  == domain 3  score: -11.0 bits;  conditional E-value: 8
      AAA_15  90 keyektlkskekkkadlllkkkesdlkktikdkklklkknelsdekisvekkks.................kkelpkekeeklekekeelkidkedlkk 171
                 keye ++k+   +   +++ + ++++ k+ ++kk+ ++k++++ ++i++ k  +                  k++ ++ ee  + ek+el+   e+lk 
  KHJ35379.1 500 KEYEIIEKEA--QLIAKQMAQSDREHIKFEEKKKFLVNKQKKTEKNIHDSKTAAveaqetiencgleieklCKKISEM-EEQMKVEKYELDSIRESLKG 595
                 2222222211..111112333333333333333333333333333333333222222222222222222112222222.22222333333333333333 PP

      AAA_15 172 likkleeslkkee...........elknvlksaiiklllisakRnvsd....edsekkssllgklkekileealqekleeelteklkeiqeklkeidkk 255
                   + ++ ++ +++           ++++ +  a  +l +i++k n+s     e + k+ss+++    k++e  +++ ++ +l+  +++iq++l+++ ++
  KHJ35379.1 596 KTQVFSDQIAEKQkylepwnakisQINSAIAVAESELSIIHEKANASAvaleESKAKISSIKNDREAKLIELENSKAQRAKLELHASRIQSELNQLLSQ 694
                 333333333333366666666665555555555555555555555555555233333333333333333333333333444444444444444444444 PP

      AAA_15 256 laeelk 261
                  +e  k
  KHJ35379.1 695 EQEIRK 700
                 333333 PP

  == domain 4  score: -17.1 bits;  conditional E-value: 8
      AAA_15  147 lpkekeeklekekeelkidkedlkklikkleeslkkee...............elknvlksaiiklllisakRnvsdedsekkssllgklkekilee 228 
                   ++ + ++le+ + ++k+++e+l+  +   e+ +k+ +                +   lk++i +l    +  +v++ + +k+++  +k ++k +e+
  KHJ35379.1  974 SDEARVSSLESTIIKFKVEFEKLRGESASVESEIKSLQdkimevggeklrvqkAKLDTLKENINTLGETISAAEVNQAKAKKQKTKHEKSYSKAVED 1070
                  2222333333333333333444444444444444443355555555445444422222333333333333333333333333333333333333333 PP

      AAA_15  229 alqekl........eeelteklkeiqeklkeidkklaeelk..kilkkkidkikkfnykgkknee 283 
                    +  +        + +++e+ ++ qek++e++ kl++++k  k+lk ++d+ +     ++ ne 
  KHJ35379.1 1071 FESATAelrnleleINNQNENVQDYQEKVDEAQAKLEAKKKelKTLKADLDEKN-----SVLNEI 1130
                  222222444555555555666666666666666666555555533333333321.....111111 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   7.9e-08   0.00018       4      46 ..     213     256 ..     210     262 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 7.9e-08
      AAA_29   4 lqlvNWgtfdg.hti.eidlkgatlltGpsGsGKSTllDAiqalL 46 
                 l l N  ++ + +++ +++  ++t ++Gp+GsGKS ++D++ +++
  KHJ35379.1 213 LILTNFKSYAErQEVgPFH-TSFTSVVGPNGSGKSNIIDSLLFVF 256
                 6677888887775551555.558*****************99885 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9   0.0     0.014        30       4      24 ..     231     251 ..     225     256 .. 0.85
   2 ?   -4.0   0.0       7.5   1.7e+04      95     120 ..     451     476 ..     419     483 .. 0.68
   3 ?   -1.4   0.2       1.2   2.6e+03      97     114 ..    1099    1118 ..    1044    1129 .. 0.76
   4 ?    3.2   0.0     0.044     1e+02      73     131 ..    1321    1394 ..    1236    1399 .. 0.70

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.014
      AAA_22   4 tagilvvtGesGtGKTtllrr 24 
                 + +++ v+G+ G+GK+  +  
  KHJ35379.1 231 HTSFTSVVGPNGSGKSNIIDS 251
                 67899***********87765 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 7.5
      AAA_22  95 liiDEaqh.lr.seealeeLrsllnlsr 120
                 + +DE  + +  +eea+++L s ln  +
  KHJ35379.1 451 IYVDECSNnMGiTEEAITQLLSQLN--K 476
                 5667766655355777777776666..4 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 1.2
      AAA_22   97 iDEaqh.lr.seealeeLrs 114 
                  +DEaq  l  +++ l++L+ 
  KHJ35379.1 1099 VDEAQAkLEaKKKELKTLKA 1118
                  89999989666888888864 PP

  == domain 4  score: 3.2 bits;  conditional E-value: 0.044
      AAA_22   73 lsseellealeqalrarav.ielliiDEaqh.lr....s.........eealeeL.rsllnlsrkgvqliLvGtp 131 
                  + ++ l ++    + ++++ ++l + DE++  l+    s          ++ ++L  sl n + + ++  LvG +
  KHJ35379.1 1321 GGEKTLSSLALVFALHHYKpTPLYVMDEIDAaLDfrnvSivanyikerTKNAQFLvISLRN-NMFELATRLVGVY 1394
                  456666655555555555559**********996654313334444444444444223333.5666666666555 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.6         5   1.1e+04      64      74 ..      45      55 ..      10     107 .. 0.47
   2 ?   11.0   0.0    0.0002      0.45      13      32 ..     234     253 ..     228     372 .. 0.78
   3 ?   -3.9   4.5         8   1.8e+04      28      75 ..     488     538 ..     400     586 .. 0.60
   4 ?   -3.4   4.7       5.6   1.3e+04      79     114 ..     669     721 ..     591     734 .. 0.47
   5 ?   -2.7   0.1       3.6     8e+03      53      76 ..     901     925 ..     848     979 .. 0.50
   6 ?   -1.7   7.3       1.7   3.8e+03     100     125 ..    1310    1335 ..     984    1351 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 5
                E-SS--S-TTS CS
                xxxxxxxxxxx RF
    ABC_tran 64 lpqepqlfpel 74
                ++q+++++  +
  KHJ35379.1 45 ISQKNHHKASS 55
                22222222111 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.0002
                 EEEEEESTTSSHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  13 kvaivGenGaGKStLlklla 32 
                  + +vG+nG+GKS ++  l+
  KHJ35379.1 234 FTSVVGPNGSGKSNIIDSLL 253
                 5789***********99885 PP

  == domain 3  score: -3.9 bits;  conditional E-value: 8
                 HHHHTTSS--...SEEEEEETTCEGGGB-HHHCCHCEEEE-SS--S-TTSB CS
                 xxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  28 lkllagllkp...teGeilldgkdlkeqeleslrkeigvlpqepqlfpelt 75 
                 +k +++l+++   + + i+ + + + +q  +s r++i++ +++++l ++ +
  KHJ35379.1 488 IKKICKLYENgqkEYEIIEKEAQLIAKQMAQSDREHIKFEEKKKFLVNKQK 538
                 333444443321111112222222222444444444444444444433333 PP

  == domain 4  score: -3.4 bits;  conditional E-value: 5.6
                 H.......................HHHTCHHHHHHHSTTGGTTCBGESTTSGGS-HHHH CS
                 x.......................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  79 n.......................esdeeiekalsklglkelkdtvvksspssLSgGqk 114
                 n                        +++ei k ls      ++ +++++  +sLS  q 
  KHJ35379.1 669 NskaqraklelhasriqselnqllSQEQEIRKNLS------TARQKADEARASLSNTQT 721
                 12222333333322222222211111111111111......222222222334444444 PP

  == domain 5  score: -2.7 bits;  conditional E-value: 3.6
                 -HHHCCHCEEEE-SS.--S-TTSBH CS
                 xxxxxxxxxxxxxxx.xxxxxxxxx RF
    ABC_tran  53 eleslrkeigvlpqe.pqlfpeltv 76 
                 +le  r +++  +q+ +  ++el++
  KHJ35379.1 901 QLELDRDSLEQNFQKfQGRQKELEI 925
                 2233333333333332222222222 PP

  == domain 6  score: -1.7 bits;  conditional E-value: 1.7
                  BGESTTSGGS-HHHHHHHHHHHHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran  100 tvvksspssLSgGqkqrvalarallk 125 
                  ++  ++ s+LSgG+k   +la +++ 
  KHJ35379.1 1310 KKSWKNISNLSGGEKTLSSLALVFAL 1335
                  33336669999999999988887754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1418 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2810  (0.156729); expected 358.6 (0.02)
Passed bias filter:                      492  (0.0274416); expected 358.6 (0.02)
Passed Vit filter:                       142  (0.00792013); expected 17.9 (0.001)
Passed Fwd filter:                        76  (0.00423894); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 2.42u 0.40s 00:00:02.82 Elapsed: 00:00:00.72
# Mc/sec: 5962.79
//
Query:       KHJ35380.1  [L=157]
Description: putative microtubule-associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.5e-11   42.7   0.7    8.8e-11   41.8   0.7    1.5  1  Med9        RNA polymerase II transcription mediator complex 
     0.0056   16.9   2.1     0.0068   16.7   2.1    1.2  1  Med21       Subunit 21 of Mediator complex
     0.0062   16.4   0.8     0.0084   16.0   0.8    1.2  1  Spc29       Spindle Pole Component 29
  ------ inclusion threshold ------
      0.029   14.2   3.6       0.04   13.7   3.6    1.1  1  Phage_GP20  Phage minor structural protein GP20


Domain annotation for each model (and alignments):
>> Med9  RNA polymerase II transcription mediator complex subunit 9
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   0.7     2e-14   8.8e-11      17      78 ..      71     131 ..      56     133 .. 0.93

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 2e-14
        Med9  17 pnlsskdletktgelrhkLkkarelirelpgidrsveeqeaeieeleeqlakKrelLkkykn 78 
                 p l+ kd+ ++t+ lr++L+ka  +i + p++ rs+eeqe ei+ele ++ k+++ ++++++
  KHJ35380.1  71 P-LTDKDITSATDVLRLQLQKAHMQIGQFPDMHRSIEEQELEIKELESKILKQKDTISEIQK 131
                 5.7789*************************************************9999876 PP

>> Med21  Subunit 21 of Mediator complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   2.1   1.5e-06    0.0068      75     141 ..      80     145 ..      38     148 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 1.5e-06
       Med21  75 lardlilkeqqIeyLIssLPgigsseeeqeerikeLeeelreveeereekvkekeellkkveellra 141
                   + l l+ q+  + I + P+++ s eeqe +ikeLe+++ + ++    ++++  ++ kk+ee +++
  KHJ35380.1  80 ATDVLRLQLQKAHMQIGQFPDMHRSIEEQELEIKELESKILK-QKDTISEIQKFARVSKKLEEKIEE 145
                 444455778899999***********************9865.566677888999999999988875 PP

>> Spc29  Spindle Pole Component 29
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.8   1.9e-06    0.0084     109     161 ..      88     143 ..      68     156 .. 0.71

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 1.9e-06
       Spc29 109 ldsiyssvkkivelekklddqkleIkeLkreleqqrtvnseLqe..kv.aeleeev 161
                 l++ + ++ +  ++++ +++q+leIkeL+ ++ +q+  +se+q+  +v ++lee++
  KHJ35380.1  88 LQKAHMQIGQFPDMHRSIEEQELEIKELESKILKQKDTISEIQKfaRVsKKLEEKI 143
                 4555556667789****************998888888888874224424677777 PP

>> Phage_GP20  Phage minor structural protein GP20
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   3.6     9e-06      0.04      22      93 ..      76     147 ..      72     155 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 9e-06
  Phage_GP20  22 eveeerdtlkeqlkdrdkqLedLkkkakdneeLqkqieelqaknkkakaeyeakiad.lkldnaielaLkeak 93 
                 +++++ d l  ql+++  q+ ++ ++    ee + +i+el+ k+ k+k++  ++i++   +++ +e+ ++e++
  KHJ35380.1  76 DITSATDVLRLQLQKAHMQIGQFPDMHRSIEEQELEIKELESKILKQKDTI-SEIQKfARVSKKLEEKIEENS 147
                 67889999************************************9965554.555551456777777777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (157 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1418  (0.0790897); expected 358.6 (0.02)
Passed bias filter:                      589  (0.0328518); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 1213.04
//
Query:       KHJ35381.1  [L=521]
Description: hypothetical protein EV44_g2185 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.5e-77  259.9   0.0    2.2e-77  259.4   0.0    1.2  1  iPGM_N         BPG-independent PGAM N-terminus (iPGM_N)
    1.5e-66  224.3   0.1    1.8e-66  224.0   0.1    1.1  1  Metalloenzyme  Metalloenzyme superfamily
    9.6e-08   31.8   0.1    7.1e-07   28.9   0.1    2.0  1  Sulfatase      Sulfatase
      4e-05   23.4   0.0    6.1e-05   22.8   0.0    1.3  1  Phosphodiest   Type I phosphodiesterase / nucleotide pyrophos


Domain annotation for each model (and alignments):
>> iPGM_N  BPG-independent PGAM N-terminus (iPGM_N)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  259.4   0.0   4.9e-81   2.2e-77       1     214 [.      88     300 ..      88     301 .. 0.96

  Alignments for each domain:
  == domain 1  score: 259.4 bits;  conditional E-value: 4.9e-81
                 HHHHHHCTGGGG-HHHHHHHHHHHHCTSEEEEEEE-SS--SS--CHHHHHHHHHHHHTT-SEEEEEEEE-SSSSTTT-HHHHHHHHHHHHHHCT--EEE CS
      iPGM_N   1 inkaiedgslfenealkeaiekakkngkalHllGLlSdGgVHShidhllallelakeegvkkvvvhaflDGRDtapksaleyleeleeklkelgvgkia 99 
                 i+++i++g+l++n+++ +++++ak++ ++lHl+GL+SdGgVH+++dhl+all++ake ++++v++h+f DGRDt+pks+++y+e+l  k+ke+g+g+++
  KHJ35381.1  88 IDQTIKKGELNQNSVVMDCFKRAKSETGRLHLVGLVSDGGVHAKQDHLYALLKVAKEIEIPHVFIHFFADGRDTDPKSSKGYMENLLLKIKEIGIGQVS 186
                 899************************************************************************************************ PP

                 EEEEHHHHT--SS-HHHHHHHHHHHCCSSSEEECTTHHHHHHHHHHTT--GGG---EEE...TCCGGS--TT-EEEE----CCCCHHHHHHHH...STT CS
      iPGM_N 100 svsGRyyaMDRdkrwervekaydalvkgegeskaesaveaieesyakgetDefveptviaeegkkegtikdgDaviffNFRaDRareltralt...dke 195
                 sv+GRyyaMDRdkrwervek+ +al+ g+ge+ + +++++iee+ya+getDef++p++i   g ke++i+dgD+v+ffN+R+DR+re+t++l    ++ 
  KHJ35381.1 187 SVVGRYYAMDRDKRWERVEKGLNALCVGDGEQ-SVDPIKTIEERYAAGETDEFFKPIII---GGKEARIQDGDQVFFFNYRSDRVREITQLLGghdRSP 281
                 **************************9*9977.679***********************...8899***************************653234 PP

                 HHCC.--TT-EEEESS-S- CS
      iPGM_N 196 fkefekakklklvtmteYd 214
                 +++f  +k+++++tmt+Y+
  KHJ35381.1 282 LEDFPYPKNITVTTMTQYK 300
                 7788799***********8 PP

>> Metalloenzyme  Metalloenzyme superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  224.0   0.1     4e-70   1.8e-66       2     247 ..       7     507 ..       6     508 .. 0.96

  Alignments for each domain:
  == domain 1  score: 224.0 bits;  conditional E-value: 4e-70
                    EEEEEEETTBB----...GGGTTHHHS--HHHHHHHHH........SEEEEEESSSTT----HHHHHHHH.......................... CS
                    xxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx.......................... RF
  Metalloenzyme   2 kvvlvvlDGlGeapa...delnaihvAktPtldkLkkeaPerw.likahgtavglpeddmgnsevgHlel.......................... 67 
                    k+vl+v+DG+G+  +   ++ +ai  A+tP++d++ k   +++  ++a+ +avglpe+ mgnsevgHl++                          
     KHJ35381.1   7 KAVLIVIDGWGIPSEsspKDGDAITAAETPVMDAFQKD-TNAYtELDASSLAVGLPEGLMGNSEVGHLNIgagrvvwqdvvridqtikkgelnqns 101
                    789********865555599999************999.68888**************************************************** PP

                    ................................................................................................ CS
                    ................................................................................................ RF
  Metalloenzyme  68 ................................................................................................ 67 
                                                                                                                    
     KHJ35381.1 102 vvmdcfkraksetgrlhlvglvsdggvhakqdhlyallkvakeieiphvfihffadgrdtdpksskgymenlllkikeigigqvssvvgryyamdr 197
                    ************************************************************************************************ PP

                    ................................................................................................ CS
                    ................................................................................................ RF
  Metalloenzyme  68 ................................................................................................ 67 
                                                                                                                    
     KHJ35381.1 198 dkrwervekglnalcvgdgeqsvdpiktieeryaagetdeffkpiiiggkeariqdgdqvfffnyrsdrvreitqllgghdrspledfpypknitv 293
                    ************************************************************************************************ PP

                    ....................................HHHHTT-----EEEEEEEE-S---SS...HHHHHT--EEE.E--SHHSTT--HHHHHHHH CS
                    ....................................xxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxx RF
  Metalloenzyme  68 ....................................lrisetvkfahvtffwnggrsgyfnp...leereeipsdt.vitfdlqpemkavevaeka 123
                                                        ++i+et+k+ahvtff+ngg+++ f+     e +  +ps++ v t+d +pem+a  va+++
     KHJ35381.1 294 ttmtqykaeypyqiafkpqhmgnvlaetlgsqgvnqVHIAETEKYAHVTFFFNGGVEKIFPLetrDESQDLVPSNKsVPTYDKAPEMSAAGVAKQT 389
                    ************************************99********************9986323355677999753779**************** PP

                    HHHH.CC.-SEEEEEE-HHHHHHHTT-HHHHHHHHHHHHHHHHHHHTTS-TTTEEEEEE-SSB--TTTSS........-----EEEEEESTT---- CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Metalloenzyme 124 ldailsgkfdlvvvniknaDmvGHtgdleatiaaieaaDeavkeildaieqvdgilvvtADHgnaedmvkrdkqplTsHtlepVPilivgkglapd 219
                    ++ i++gkf++++ n++ +DmvGHtg +ea+i ++ a D+a++ei +++++++ il++t+DHgnae+m+  d +p TsHt+++VP+++++   +  
     KHJ35381.1 390 CKRIKEGKFEFIMNNFAPPDMVGHTGVYEAAIIGVAATDKAIGEIYETCKKENYILFITSDHGNAEEMKFPDGKPKTSHTTNKVPFVMANAPSNW- 484
                    ***************************************************************************************99986443. PP

                    S--SSHHHHTT-TTEEEEGGGHHHHHHH CS
                    xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Metalloenzyme 220 kvkegakfrekggLanvaatllnllgle 247
                            +++g L++va+t+l+ +gl+
     KHJ35381.1 485 -----SLQKSDGVLGDVAPTILEVMGLQ 507
                    .....12345**************9986 PP

>> Sulfatase  Sulfatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.9   0.1   1.6e-10   7.1e-07     210     308 ..     416     505 ..     285     506 .. 0.81

  Alignments for each domain:
  == domain 1  score: 28.9 bits;  conditional E-value: 1.6e-10
                 HHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGEEEEEEESSSSCCCGHHTTSSSCTTCSSSHHHHBEEEEEEETTTSHC.EEECSEEEGGGHHHHHHHHT CS
   Sulfatase 210 lleaylnsveyvDdligrvlaaLeenglldntlvvftSDhgasleesngplrggkganayeggtrvPllvwwpgekap.rvseelvshiDlfptildla 307
                 ++ea    v+ +D++ig+++++     +++n ++++tSDhg +  e    + +gk  ++++   +vP++++    + + ++s+++    D++ptil+++
  KHJ35381.1 416 VYEAAIIGVAATDKAIGEIYETC----KKENYILFITSDHGNAE-E--MKFPDGKP-KTSHTTNKVPFVMANAPSNWSlQKSDGVLG--DVAPTILEVM 504
                 55555667899************....***************44.4..79999999.9999999******98887777699999988..*********9 PP

                 T CS
   Sulfatase 308 g 308
                 g
  KHJ35381.1 505 G 505
                 9 PP

>> Phosphodiest  Type I phosphodiesterase / nucleotide pyrophosphatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.0   1.4e-08   6.1e-05     170     236 ..     389     455 ..     300     478 .. 0.81

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 1.4e-08
                   T......SSESEEEEEECCCHHHHHHH-TTSHHHHHHHHHHHHHHHHHHHHHHHTTGTTTEEEEEEES---EE CS
  Phosphodiest 170 l......ekpdlllvyleetDtvgHkfGpdspevedalrrvDkaigdLlealderglsaetniilvSDHGmad 236
                          +k  +++ ++  +D vgH  G ++      ++  Dkaig+++e  +++    ++ ++++SDHG a+
    KHJ35381.1 389 TckrikeGKFEFIMNNFAPPDMVGH-TGVYEA-AIIGVAATDKAIGEIYETCKKE----NYILFITSDHGNAE 455
                   1224467999***************.666665.5678999***************....***********776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (521 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       446  (0.0248759); expected 358.6 (0.02)
Passed bias filter:                      418  (0.0233142); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.55u 0.21s 00:00:00.76 Elapsed: 00:00:00.36
# Mc/sec: 4282.43
//
Query:       KHJ35382.1  [L=858]
Description: putative dna ligase i [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.1e-54  183.0   2.3    1.1e-51  175.4   0.5    2.4  2  DNA_ligase_A_M  ATP dependent DNA ligase domain
    2.6e-35  122.3   0.0    5.7e-35  121.2   0.0    1.6  1  DNA_ligase_A_N  DNA ligase N terminus
    6.8e-17   61.9   0.0    1.8e-16   60.5   0.0    1.8  1  DNA_ligase_A_C  ATP dependent DNA ligase C terminal region
      5e-07   30.2   0.1    1.1e-06   29.0   0.1    1.6  1  RNA_ligase      RNA ligase


Domain annotation for each model (and alignments):
>> DNA_ligase_A_M  ATP dependent DNA ligase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.4   0.5   2.4e-55   1.1e-51       1     188 [.     435     623 ..     435     628 .. 0.97
   2 !    7.0   0.0   0.00093       4.2     185     204 .]     666     685 ..     665     685 .. 0.90

  Alignments for each domain:
  == domain 1  score: 175.4 bits;  conditional E-value: 2.4e-55
                     -EEEEEESCHHHHHHHTTTSEEEEEEEESSEEEEEEE.ETTEEEEEETTS-B-GGGCHHHHHHHHHHBSTTESEEEEEEEEEEEETTTTCBEHHH CS
  DNA_ligase_A_M   1 pmLAeslksiekalkkleekafivEiKyDGeRaqvhk.egdkvklfSRrlkditaakpelvkalkeafkkdeksvilDGElvavdketgeilpfq 94 
                     pmL + +++++++l+k++ ++f++E+KyDG+Raq+h  +++k+++fSR l+ +t+++p+lv  +++++ +++k++i++GE+vavd  tge+  fq
      KHJ35382.1 435 PMLGSITRDLSEMLSKFQDRQFTCEYKYDGQRAQIHCdDQGKISIFSRHLEIMTDKYPDLVALIAKIRGENVKNFIMEGEVVAVDHSTGEFKSFQ 529
                     9***********************************9899******************************************************* PP

                     HHCHHHHCHCCTHHHHHHSEEEEEEEEEEEETTEEHTTSCHHHHHHHHHHHB--BTTTEEE--EEEE..SSHHHHHHHHHHHHHTTECEEEEEET CS
  DNA_ligase_A_M  95 klasrkkkkkkveeklkeaelclfvFDiLyldgesltdeplkeRrklLeeilkesedrvelaeslev..kdveeleelleeaiseglEGlvvKnp 187
                     +l++r++k++++ ++  ++e+c+f+FD++y+++e+l++++l++RrklL+e ++e+++r+  ++sl+   +d+e++ e+++ ai++++EG++vK+ 
      KHJ35382.1 530 TLSNRARKEVAIGSI--KVEVCFFAFDLMYFNDEPLLQKSLRQRRKLLREQFTEIKNRFTWVKSLDAtsHDSETILEFFNSAIQSKCEGIMVKML 622
                     ***************..**********************************************99874478999*******************97 PP

                     T CS
  DNA_ligase_A_M 188 d 188
                     d
      KHJ35382.1 623 D 623
                     6 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.00093
                     EETT-CC-TTCEEEEEEEEE CS
  DNA_ligase_A_M 185 KnpdskYepgkrsknwlKvK 204
                     K   s+Yep+kr + wlK+K
      KHJ35382.1 666 KVLLSTYEPDKRLESWLKIK 685
                     66779**************9 PP

>> DNA_ligase_A_N  DNA ligase N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.2   0.0   1.3e-38   5.7e-35       1     172 [.     177     354 ..     177     355 .. 0.97

  Alignments for each domain:
  == domain 1  score: 121.2 bits;  conditional E-value: 1.3e-38
                     BCHHHHHHHHHHCC.---HHHHHHHHHHHHHTS-..SHHHHHHHHHH....SS-CCCS------HHHHHHHHHHHHT--HHHHHHHHHHHS-HHH CS
  DNA_ligase_A_N   1 pFaelaelfekieestkkrlekrailanffrkvesagpedlypalrL....llPdydgreygigesllakalaealglskkkikdalakvgDlge 91 
                     ++a+l++ f  i++ t++r+++++ l+nf+r +++ +p++l+p ++L    + P +   e+g+g+s ++kal ++++++ k +k+ ++kvgD g+
      KHJ35382.1 177 SYALLTRCFVLINS-TSSRIKIVDTLTNFLRLLIEGEPSSLLPSVWLatnsISPPFIPLELGLGGSFISKALKNIYNIDAKALKALYNKVGDAGD 270
                     5899**********.999*************************************************************999************* PP

                     HHHHHHCCHHHH.------BHHHHHHHHHHHHH-.STTHHHHHHHHHHHHHHHS.-HHHHHHHHHHHCT---SS--HHHHHHHH CS
  DNA_ligase_A_N  92 vaeevlskrstl.akkspltieevnelLdklaaa.gkgsedekkkilkkllkra.speEakyliriilkdlriglsektvldal 172
                     va+ev+++++ + + ++plti+ v+++L k+a++ g+gs + k++i+ +ll+ a +peE ++l+r++ + lrig+ ++t+l al
      KHJ35382.1 271 VAFEVKKRQTYTlRRPKPLTIKGVYQSLVKIANTrGNGSVEIKQRIVDRLLQDAqGPEESRFLVRTLCQHLRIGAVKTTMLIAL 354
                     ******8888779*******************999******************989*************************998 PP

>> DNA_ligase_A_C  ATP dependent DNA ligase C terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.5   0.0     4e-20   1.8e-16       2      99 .]     710     822 ..     709     822 .. 0.92

  Alignments for each domain:
  == domain 1  score: 60.5 bits;  conditional E-value: 4e-20
                     GGSEEEEEEEEEE..TTEEEEEEEE-SS--HHHHHHHHHHHG....GGEECTTCESS---HHHHTTEEE-TT-EEEEEESEEECTSSSTT..... CS
  DNA_ligase_A_C   2 gglvgslllgvyd..dgkleyvgkvgtGfsdaeleelrkklk....elerkkppfaekvpeeekrdvWvePelvveVkfaeitasgkyka..... 85 
                     +++++ +ll+v +  +g+le v+k+ +Gf+d  ++e ++ ++    ++  +kp f e    +  +dvW+eP+ v+e +fa++t s+ y+a     
      KHJ35382.1 710 SKWWSPILLAVKNeiTGSLEAVCKCISGFTDTFYKENKEFYRedgpNVLSRKPGFVEYDGGH--PDVWFEPQEVFEMAFADLTLSPVYTAaiglv 802
                     688999***********************************999997888888885555554..679**************************** PP

                     ......EECT-EEEEE-TTS CS
  DNA_ligase_A_C  86 ......slRfPrfkrlReDk 99 
                           s+RfPr+++ R+Dk
      KHJ35382.1 803 seerglSMRFPRYVKKRTDK 822
                     *******************8 PP

>> RNA_ligase  RNA ligase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.0   0.1   2.5e-10   1.1e-06       2     147 ..     455     623 ..     454     633 .. 0.69

  Alignments for each domain:
  == domain 1  score: 29.0 bits;  conditional E-value: 2.5e-10
                 EEEEEEE-SSEEEEEEEETT..EEEEETTCEB..CTTTHHHHHHTHHHHHHHHHHHHH.....ECCEEEEEEEES...SS........TTSS....... CS
  RNA_ligase   2 evvvtEKlDGtnfriylvke..vgvasRsqil..pfgeekfkefkrwaaalrkklkekla...neelilyGElig..hsi......kygglpk...... 79 
                 ++ ++ K DG +++i+++++  + ++sR  ++  +        ++   +a    l +k++   ++++i+ GE++   hs       +            
  KHJ35382.1 455 QFTCEYKYDGQRAQIHCDDQgkISIFSRHLEImtD--------KYPDLVA----LIAKIRgenVKNFIMEGEVVAvdHSTgefksfQ-----Tlsnrar 536
                 678899************6667**********321........2222233....333334567789*********986666544320.....1334567 PP

                 ............EEEEEEEEEEECTT.......BECE--HHHHHHHHHCCTB..EEEEE.SS..HHHHHCCC..HHHHTC--EEEEEESS CS
  RNA_ligase  80 ............efyvFdifdirdke.......eqrylspdevealakglgtvpvlyegkfl..aaeellell.lskgnkrEGlVikpes 147
                              f++Fd++ ++d+        ++r l ++++ ++++++    ++++ +++  ++e++le++ +  ++k+EG+ +k  +
  KHJ35382.1 537 kevaigsikvevCFFAFDLMYFNDEPllqkslrQRRKLLREQFTEIKNRF---TWVKSLDATshDSETILEFFnSAIQSKCEGIMVKMLD 623
                 788999999999********999555777778778888888886666655...455555555456667777743344679******9554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (858 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       952  (0.0530983); expected 358.6 (0.02)
Passed bias filter:                      670  (0.0373696); expected 358.6 (0.02)
Passed Vit filter:                        49  (0.002733); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.72u 0.26s 00:00:00.98 Elapsed: 00:00:00.44
# Mc/sec: 5901.09
//
Query:       KHJ35383.1  [L=383]
Description: putative tubulin binding cofactor c [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-28   96.3   0.1    1.6e-27   95.6   0.1    1.3  1  TBCC      Tubulin binding cofactor C
      4e-07   30.5   0.0    6.7e-07   29.8   0.0    1.3  1  TBCC_N    Tubulin-specific chaperone C N-terminal domain


Domain annotation for each model (and alignments):
>> TBCC  Tubulin binding cofactor C
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.6   0.1   1.8e-31   1.6e-27       5     120 .]     223     336 ..     219     341 .. 0.91

  Alignments for each domain:
  == domain 1  score: 95.6 bits;  conditional E-value: 1.8e-31
                 EE-S-BS-EEEE......-S--S-EEEES-BS-EEE----SS-EEEES-BS-EEE---SEEEEES-BS-EEE---SSEEEEES-BSEEEE------TTS CS
        TBCC   5 kisnlsdctiyl......ldplssvtiddcknctivlgpvsgsvfiedcenctivvacrqlrihdctnvdvylltksrPiiedskgirfapynlsypel 97 
                 ++++ls + +++       +p++s+ i+d++nc iv g+v+gs++i+++ ++ i+v++ q+rihdc+++++yl+++s Piie++++i+fap +  y + 
  KHJ35383.1 223 TVTKLSGSIVDMsiptttKTPFASLVIKDIRNCLIVGGQVAGSAHITSVMESIIAVSAGQIRIHDCEDMKFYLYSTSPPIIENCTNIQFAPLPKCYLGP 321
                 67888999999999999899****************************************************************************999 PP

                 HHHHHHHT--SS---.-S-EE-- CS
        TBCC  98 eehlkkagldpennnlwsevddf 120
                 ++       d + n+ w++v+df
  KHJ35383.1 322 DQ-------DLDANK-WDQVQDF 336
                 85.......444466.7777776 PP

>> TBCC_N  Tubulin-specific chaperone C N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.0   7.5e-11   6.7e-07      30     115 ..      23     109 ..      13     110 .. 0.95

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 7.5e-11
      TBCC_N  30 kvdsFlkaFteekaaieellesve.esadksklkqkldeitaeiqeLqkllaessmfLpsYdlrsaqealskLkesleeareellPk 115
                 + ++F + F +++ ++ e++e+++  s+   ++++ ++ +   i +L +++a++s  ++sYd r + + +  L+e+l  +++ ++P+
  KHJ35383.1  23 NKEYFHQYFHQQSSQLLEQIERLHeFSLVGGERQDAIEHVLGGITDLSNYVADASDQISSYDKRVYSDGIRILEEKLRVTQSSIAPN 109
                 6789********************9899999****************************************************9996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (383 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       472  (0.0263261); expected 358.6 (0.02)
Passed bias filter:                      438  (0.0244297); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.52u 0.25s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2650.52
//
Query:       KHJ35384.1  [L=790]
Description: putative rint-1 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   1.3e-144  482.8   9.6   1.3e-144  482.8   9.6    1.5  2  RINT1_TIP1     RINT-1 / TIP-1 family
  ------ inclusion threshold ------
       0.02   14.7   0.4        3.2    7.7   0.1    3.4  3  TPR_1          Tetratricopeptide repeat
      0.026   15.5   2.4        1.4    9.9   0.2    3.0  3  CSN5_C         Cop9 signalosome subunit 5 C-terminal domain
      0.089   12.9   3.7       0.31   11.1   3.7    2.0  1  Nup54          Nucleoporin complex subunit 54
       0.48   10.7   3.4        8.1    6.8   0.1    3.6  3  TPR_2          Tetratricopeptide repeat
       0.81    9.6   8.6       0.36   10.7   3.3    2.8  3  CLTH           CTLH/CRA C-terminal to LisH motif domain
        2.9    8.0   9.9       0.62   10.2   4.4    2.6  2  Tropomyosin_1  Tropomyosin like
        5.3    7.6   8.0       0.57   10.7   0.3    3.3  4  Carbpep_Y_N    Carboxypeptidase Y pro-peptide
          8    6.6   8.1        1.1    9.3   0.4    2.9  3  DUF5532        Family of unknown function (DUF5532)


Domain annotation for each model (and alignments):
>> RINT1_TIP1  RINT-1 / TIP-1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1       2.2   4.3e+03     251     276 ..      27      50 ..       5      94 .. 0.48
   2 !  482.8   9.6  6.7e-148  1.3e-144       1     499 []     239     777 ..     239     777 .. 0.96

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 2.2
  RINT1_TIP1 251 egvkglerlckiygsakylenaledw 276
                 eg+++l + ++i+   kyle+ l+d 
  KHJ35384.1  27 EGLESLITSVEIQQ--KYLEEQLHDV 50 
                 22222222222222..3333333222 PP

  == domain 2  score: 482.8 bits;  conditional E-value: 6.7e-148
  RINT1_TIP1   1 LplevlvkplekrFrYHFsgdkqTnklsk.pewflefilklleknldflrenvqpilakkfrek........idavsefitaLlplvreKvasvleevl 90 
                 Lpl+v++k++ ++F+YHFsgdk Tn++++ +++f+e++l++++k+++fl +nv pila +f+++        +d++ +fi++L p+++eKv+s ++++l
  KHJ35384.1 239 LPLKVITKNILLEFQYHFSGDKLTNQTNRlGDYFFEWFLSTVSKWEEFLLKNVAPILAVHFKDSplatdpsfVDPIAAFINSLFPILQEKVESLAKQIL 337
                 8************************************************************************************************** PP

  RINT1_TIP1  91 sdpalLshlisellsfdkeLrekykYda...eekwkgLtselLdqekvfekWlevEkefalerfeeIisskdaweidyDsveskktkptksavrvvdLL 186
                  +p+lLs++i +ll fd+ Lr ++kY     ++ ++gLts++L+    f+ W evEk+faler++eI+++k+++eidyDs++ +ktk ++++ +v+dL+
  KHJ35384.1 338 TQPQLLSQFIIQLLDFDDSLRVRFKYGGsnhHTAKEGLTSHILEIY--FDDWYEVEKKFALERYQEIVQAKNSGEIDYDSSSIGKTKSSYGSSQVTDLI 434
                 ***************************44568889********988..*************************************************** PP

  RINT1_TIP1 187 esiteryeplssfsyklkflsdIqlelldqYherLkssleayesltstvgrtlqgetkeqqaelegvkglerlckiygsakylenaledwsdevfFieL 285
                  +it +y++l++fs+k+kf++ Iq e+ld Y+ rL+++le y++ +stvgrt++g+tke+ +e++gvkgl++lc+++gsa+y+++al++w +++fF+ +
  KHJ35384.1 435 ANITMKYKRLQEFSHKIKFFIGIQAEILDLYLGRLNDALEYYQTANSTVGRTIHGVTKEELDEIKGVKGLDKLCRVFGSADYIVSALKEWIHDEFFLVI 533
                 *************************************************************************************************** PP

  RINT1_TIP1 286 weelqerakknee.................stavgseeegalFdetiaaydrlrkraeelivealkkeikealkaYvnksqWsslsssses...slsvs 364
                  +elq+r+++ ++                 s++v se++g+lFd ti+ay+r r++ae+li++a+k+++ +++++Y++ksqW+ + +       s+ ++
  KHJ35384.1 534 YDELQTRVASVDSttrfasniaasevikcmSKSVVSESDGSLFDTTIEAYERQRDKAESLITQAIKYDLPQLFRPYLTKSQWTIVGEVPLLepiSTLIT 632
                 *******999888888988888877776654466666*********************************************87776654489999*** PP

  RINT1_TIP1 365 selvellnllkrlldfLekalskalfrriwrelleklqdllweevllrnkFseaGaaQlarDvealfalvdryik.....elklkkLkealkLlnlkve 458
                 +el+ +l++l+++++fL +al+ a+frri+re+++klqdll+ ++ll+++F+  G  ++ +D+ +++++v++ ++      + ++ ++e+  Ll+l+ +
  KHJ35384.1 633 PELDLPLRILQTYVQFLYRALAMAPFRRIIREVMKKLQDLLYFDLLLNQDFTLLGSVRFSQDITTILSIVSSSLSsksqlPFDMPLVREGAVLLTLPDS 731
                 ********************************************************************99999999999999***************99 PP

  RINT1_TIP1 459 ...salsLkealervftd..eakklleelglekLseseardvLerr 499
                     + s+ ++++++f++  ea+++l++lg+++Ls+sear++L rr
  KHJ35384.1 732 kedIKNSFSNVSKAIFSSnqEATQTLKNLGITHLSNSEARTILDRR 777
                 888778999*******76678************************8 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.0   0.0     0.049        97      16      30 ..     139     153 ..     138     154 .. 0.91
   2 ?    7.7   0.1    0.0016       3.2      13      27 ..     465     479 ..     464     479 .. 0.92
   3 ?   -1.9   0.0       1.8   3.6e+03       3      14 ..     756     767 ..     755     769 .. 0.82

  Alignments for each domain:
  == domain 1  score: 3.0 bits;  conditional E-value: 0.049
                 -HHHHHHHHHHHHHH CS
       TPR_1  16 kydeAleyyekALel 30 
                 +y+ Al+ y+k Le+
  KHJ35384.1 139 NYKLALDSYSKLLEI 153
                 8**********9997 PP

  == domain 2  score: 7.7 bits;  conditional E-value: 0.0016
                 HTT-HHHHHHHHHHH CS
       TPR_1  13 klgkydeAleyyekA 27 
                 +lg++++Aleyy+ A
  KHJ35384.1 465 YLGRLNDALEYYQTA 479
                 79***********87 PP

  == domain 3  score: -1.9 bits;  conditional E-value: 1.8
                 HHHHHHHHHHHT CS
       TPR_1   3 alynlGnayfkl 14 
                 +l+nlG +++++
  KHJ35384.1 756 TLKNLGITHLSN 767
                 689****99875 PP

>> CSN5_C  Cop9 signalosome subunit 5 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.2    0.0007       1.4       9      43 ..      40      74 ..      34     119 .. 0.77
   2 ?    4.2   0.0     0.041        82       7      37 ..     421     451 ..     415     495 .. 0.87
   3 ?   -2.9   0.0       6.7   1.3e+04      55      85 ..     570     600 ..     537     602 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.0007
      CSN5_C  9 rdYatkqisDLaeKlekaessvsrsrsaagtlsee 43
                ++Y  +q+ D+++Kl++a+ + + ++sa+ +  +e
  KHJ35384.1 40 QKYLEEQLHDVQSKLSEAKLATADRNSAMLKRVDE 74
                78****************99988877766444433 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.041
      CSN5_C   7 tNrdYatkqisDLaeKlekaessvsrsrsaa 37 
                 t  +Y+++q++DL + ++   + +++ ++++
  KHJ35384.1 421 TKSSYGSSQVTDLIANITMKYKRLQEFSHKI 451
                 7789***********9999999998887776 PP

  == domain 3  score: -2.9 bits;  conditional E-value: 6.7
      CSN5_C  55 kedsqLakvvkdstkiaseaqhGLiaqelKd 85 
                 ++d +L + + ++   + ++ + Li+q +K 
  KHJ35384.1 570 ESDGSLFDTTIEAYERQRDKAESLITQAIKY 600
                 4455555555555555666777788888885 PP

>> Nup54  Nucleoporin complex subunit 54
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   3.7   0.00016      0.31      29      91 ..      27      89 ..      25     132 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00016
                ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       Nup54 29 kGFedLakRvkaQqkevaqhrerlkeisdrleeleqkhqletsvrlekakkrhvelshRllrl 91
                 G e L   v+ Qqk ++++   +++  ++++     ++  +++r+++  k+h   ++Rl+ +
  KHJ35384.1 27 EGLESLITSVEIQQKYLEEQLHDVQSKLSEAKLATADRNSAMLKRVDEFEKQHYRVQERLMAI 89
                68899999999***9999999999998888888889************************987 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3   0.0      0.25   4.9e+02      16      30 ..     139     153 ..     138     154 .. 0.92
   2 ?    6.8   0.1    0.0041       8.1      12      27 ..     464     479 ..     462     480 .. 0.92
   3 ?    0.2   0.2      0.54   1.1e+03      13      31 ..     583     601 ..     580     601 .. 0.79

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.25
       TPR_2  16 dyeeAleafekAlel 30 
                 +y+ Al+ + k le+
  KHJ35384.1 139 NYKLALDSYSKLLEI 153
                 899**********97 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0041
       TPR_2  12 yklgdyeeAleafekA 27 
                 ++lg++++Ale+++ A
  KHJ35384.1 464 LYLGRLNDALEYYQTA 479
                 689***********98 PP

  == domain 3  score: 0.2 bits;  conditional E-value: 0.54
       TPR_2  13 klgdyeeAleafekAleld 31 
                 +  + ++A+ +  +A+++d
  KHJ35384.1 583 YERQRDKAESLITQAIKYD 601
                 5677899999999999876 PP

>> CLTH  CTLH/CRA C-terminal to LisH motif domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   3.3   0.00018      0.36      45     126 ..     116     219 ..      37     242 .. 0.84
   2 ?    0.1   0.0      0.33   6.5e+02      16      67 ..     429     478 ..     421     504 .. 0.70
   3 ?   -2.5   0.1       2.1   4.1e+03      36      70 ..     671     707 ..     654     759 .. 0.58

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00018
        CLTH  45 lqfielirgktkdieealeyarenlefendehlkelekamsLLafsdpes......................kelssplknlldpsrrekvakefnsai 121
                 +++i+ +++ ++  ++al+y   n +   d++ k le  +sL  f d ++                      k l++++++ll++s + +++ +f ++ 
  KHJ35384.1 116 YNYIQFLNNIESLKDDALKYLPSNYKLALDSYSKLLEISVSLQSFLDCSEeatlylnghvqktannlwsdmkKILCDEFEKLLKKSNWPDLSCTFSKEC 214
                 344555553224689**********988888**************99666**********************9**********************9998 PP

        CLTH 122 lkllg 126
                  +  +
  KHJ35384.1 215 NEAFK 219
                 88764 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.33
        CLTH  16 dlseaiewinenkpellesnsnLeFkLkllqfielirgktkdieealeyare 67 
                 +++ +i+ i  ++++l e +++++F +  +  i  +    + +++aley ++
  KHJ35384.1 429 QVTDLIANITMKYKRLQEFSHKIKFFIGIQAEILDLY-L-GRLNDALEYYQT 478
                 5677888888888899888888888887775554444.4.788899999887 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 2.1
        CLTH  36 snLeFkLkllqfielirg...ktkdieealeyarenle 70 
                 + L+F+L+l q   l+ +   + +di+++l  +   l+
  KHJ35384.1 671 DLLYFDLLLNQDFTLLGSvrfS-QDITTILSIVSSSLS 707
                 3445777666655555434443.556666666655553 PP

>> Tropomyosin_1  Tropomyosin like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   4.4   0.00031      0.62      24      97 ..      13      87 ..       8     115 .. 0.78
   2 ?   -0.8   0.2      0.77   1.5e+03      66      91 ..     759     787 ..     744     788 .. 0.57

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 0.00031
  Tropomyosin_1 24 KeleqenlekeqeiksLtkknqqleeevekleeklkeakekaeesekkktn.nealtrkiqlLEeeleesdkkLk 97
                    ++ +enl+k ++++ L+  +  +e +   lee+l+++++k++e++ + ++ n a+ ++++  E +  + +++L 
     KHJ35384.1 13 EDYLNENLQKFSDLEGLESLITSVEIQQKYLEEQLHDVQSKLSEAKLATADrNSAMLKRVDEFEKQHYRVQERLM 87
                   455578888888888888888999999999999999998888877765554155899999999988877777775 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.77
  Tropomyosin_1  66 eesekkktnne...altrkiqlLEeelee 91 
                    + + ++ +n+e    l r+i + E ele+
     KHJ35384.1 759 NLGITHLSNSEartILDRRISQSELELEK 787
                    33344555555555667777777777664 PP

>> Carbpep_Y_N  Carboxypeptidase Y pro-peptide
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       2.8   5.5e+03      11      35 ..      32      55 ..      20      90 .. 0.62
   2 ?   10.7   0.3   0.00029      0.57      44     108 ..     166     231 ..     130     238 .. 0.67
   3 ?   -2.2   0.0       2.9   5.8e+03      22      42 ..     661     683 ..     649     713 .. 0.67
   4 ?   -1.1   0.1       1.3   2.7e+03      49      79 ..     728     759 ..     689     760 .. 0.66

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 2.8
  Carbpep_Y_N 11 aassatslqalsiqnplkdlQqalk 35
                 +++s++ +q+  +++ l d+Q +l+
   KHJ35384.1 32 LITSVE-IQQKYLEEQLHDVQSKLS 55
                 455554.344466666666666664 PP

  == domain 2  score: 10.7 bits;  conditional E-value: 0.00029
  Carbpep_Y_N  44 klskllee..eekknnvfekiskvlneplkeltseakkiWsemelkfPdavsklkfkt.kpkkketkk 108
                  +   +l+   ++  nn++++++k+l +++++l +  k  W +++  f+++ +++ +k+ + + +et k
   KHJ35384.1 166 EATLYLNGhvQKTANNLWSDMKKILCDEFEKLLK--KSNWPDLSCTFSKECNEAFKKLlHFQSQETTK 231
                  3333443334677788899999999999999987..77899999999999887766653444444433 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 2.9
  Carbpep_Y_N  22 siqnplkdlQqalklelnyd..t 42 
                  +i++++k+lQ  l ++l ++  +
   KHJ35384.1 661 IIREVMKKLQDLLYFDLLLNqdF 683
                  67889999999998887555223 PP

  == domain 4  score: -1.1 bits;  conditional E-value: 1.3
  Carbpep_Y_N  49 lee.eekknnvfekiskvlneplkeltseakk 79 
                  l + +e  +n f+++sk++  + +e+t+ +k+
   KHJ35384.1 728 LPDsKEDIKNSFSNVSKAIFSSNQEATQTLKN 759
                  33446667788888888888888888888776 PP

>> DUF5532  Family of unknown function (DUF5532)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.2       4.5     9e+03      48      78 ..      34      65 ..      18      78 .. 0.62
   2 ?    9.3   0.4   0.00056       1.1      31      87 ..     192     245 ..     189     248 .. 0.78
   3 ?    1.2   0.2      0.19   3.8e+02      40      65 ..     757     782 ..     736     789 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 4.5
     DUF5532 48 islkEAqkmLsqnLnalslt.setdvreedsq 78
                +s++  qk L+ +L+ ++++ se++    d++
  KHJ35384.1 34 TSVEIQQKYLEEQLHDVQSKlSEAKLATADRN 65
                56666688888888766544144444444444 PP

  == domain 2  score: 9.3 bits;  conditional E-value: 0.00056
     DUF5532  31 enfnkeskKsnllkthgislkEAqkmLsqnLnalsltsetdvreedsqpvltckvvr 87 
                 ++f+k  kKsn     ++  kE  + +++ L++ s   +++ +  +s+ +l  kv+ 
  KHJ35384.1 192 DEFEKLLKKSNWPDLSCTFSKECNEAFKKLLHFQS---QETTKSTQSHILLPLKVIT 245
                 689***************************99954...4444545666666666654 PP

  == domain 3  score: 1.2 bits;  conditional E-value: 0.19
     DUF5532  40 snllkthgislkEAqkmLsqnLnals 65 
                 ++ l +  +s +EA+ +L + ++ ++
  KHJ35384.1 757 LKNLGITHLSNSEARTILDRRISQSE 782
                 55666777888999999988877655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (790 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1173  (0.0654247); expected 358.6 (0.02)
Passed bias filter:                      562  (0.0313459); expected 358.6 (0.02)
Passed Vit filter:                        67  (0.00373696); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.71u 0.26s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 5563.19
//
Query:       KHJ35385.1  [L=192]
Description: putative nadh-ubiquinone oxidoreductase 213 kda subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-05   24.5   9.7    6.5e-05   23.3   9.7    1.7  1  Tim17     Tim17/Tim22/Tim23/Pmp24 family


Domain annotation for each model (and alignments):
>> Tim17  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   9.7   3.6e-09   6.5e-05       4     110 ..      13     116 ..      10     117 .. 0.74

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 3.6e-09
       Tim17   4 ktglsgvlGallGavfglvkgsrradtpapskerlreglrsvgkrgpslGknfgvvgglysgiecaleklRgkediwnsvaAGaltGall..ragpqaa 100
                 +++++g+ Ga + ++ gl+ +  +      ++++   +l  + k g ++   f +vg+ + +i+ +  +lR+++d +n++++G+++G l+  rag  aa
  KHJ35385.1  13 DAVAAGLKGASISGAAGLLIAGAQNT----LTKSNVGALGVISKFGGTI-SLFTAVGASFEFITAVSANLRERNDHLNPAIGGLVSGSLIglRAGTTAA 106
                 66677777777777777766664433....3333333344444444444.458888*******************************997558****** PP

       Tim17 101 avgaiggaaf 110
                 ++g  +gaa+
  KHJ35385.1 107 FIGYGAGAAL 116
                 ****999997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (192 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1395.52
//
Query:       KHJ35386.1  [L=321]
Description: putative ccch zinc finger domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.6e-59  199.2   1.1      1e-58  198.9   1.1    1.1  1  ELYS      Nuclear pore complex assembly


Domain annotation for each model (and alignments):
>> ELYS  Nuclear pore complex assembly
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  198.9   1.1   5.7e-63     1e-58       2     218 ..      37     252 ..      36     254 .. 0.98

  Alignments for each domain:
  == domain 1  score: 198.9 bits;  conditional E-value: 5.7e-63
        ELYS   2 LFiDrllsalaiqkdsgeaaklYPPkslqalrdlllqigsssevdllaKqslllYlLlDldasseeselaedFaaafglprklvllvqglwlLDhgefe 100
                 LFiDr+++ l+i+k    +++lYPPks   l++l+ ++++ ++ +++ K+s+++Y+Ll++d+  ++ +++e F ++  lp+k+++l++glw++Dh+efe
  KHJ35386.1  37 LFIDRIMKILGIKK----PHRLYPPKSSDGLKNLHNAVIE-TNGTDHYKLSVFFYVLLEFDRVMSTCQSSEVFVQKSFLPKKYQTLIKGLWHMDHQEFE 130
                 9*******999***....99********************.9*********************99999******************************* PP

        ELYS 101 ealelLtdPslspkefadkilqvLler..gdaslalaylravkpplssseavealfvllargsvteAfsfqRslsdkekreelleelvelclee....a 193
                  al++L++Psl+p +f+d+i++vL +   +d++l++ay++ v+p ls++++v+ l + lar+svteAf f+R++ +   ++  +e l++l+l++     
  KHJ35386.1 131 VALQYLAHPSLIP-SFPDEIIEVLCKAskDDPTLPIAYYHSVQPALSNQQTVNYLLKQLARKSVTEAFFFTRTRNEC-FQQATFELLIHLVLDQspgdV 227
                 ************9.***********9999***********************************************8.99****************995 PP

        ELYS 194 arklkeLlelpldeeEekllekfLl 218
                  +k+ eL++lp++++Ee ++e++Ll
  KHJ35386.1 228 GEKCLELINLPFTSQEEVWFEEYLL 252
                 599********************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      428  (0.0238719); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.40
# Mc/sec: 2428.00
//
Query:       KHJ35387.1  [L=303]
Description: putative mitochondrial carrier protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.8e-58  193.8   3.1    1.8e-20   72.7   0.1    3.0  3  Mito_carr  Mitochondrial carrier protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.7   0.1   1.1e-20     2e-16       6      95 ..      17     100 ..      14     102 .. 0.93
   2 !   61.1   0.1   4.2e-21   7.5e-17       3      90 ..     112     199 ..     110     203 .. 0.94
   3 !   72.7   0.1   9.9e-25   1.8e-20       6      93 ..     216     302 ..     211     303 .] 0.90

  Alignments for each domain:
  == domain 1  score: 59.7 bits;  conditional E-value: 1.1e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 +k+++aG+ +g++++l+ +P+d+vK+rlqt  + ++      +++++++iy +eG +++y+G l  l+++    +++f+++   +r l +
  KHJ35387.1  17 IKDIIAGASGGIAQVLIGQPFDIVKVRLQTTTQYKN------AVEAVSRIYAQEGALAFYKGTLTPLIGIGACVSIQFGAFHEARRRLET 100
                 6889**************************988865......79*************************************999998866 PP

  == domain 2  score: 61.1 bits;  conditional E-value: 4.2e-21
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHH.HGGGTTHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGl.rglyrGllpnllrvapasalkfvlyetlk 90 
                 ls++++ +aG +ag+v++++  P++ v++r+qtq++ s+k +s+  ld+++k++ + G+ +glyrG +++llr a a + +f+++e+l 
  KHJ35387.1 112 LSYTQYYIAGTFAGLVNSVISGPVEHVRIRMQTQPHGSRKMYSG-PLDCIRKLLTTGGVtKGLYRGEMATLLREAQAYGTWFLVFEYLM 199
                 78999*********************************998766.**************99*************************986 PP

  == domain 3  score: 72.7 bits;  conditional E-value: 9.9e-25
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   6 lkellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 +k    Gglag + +l  +P+dv+K ++qt++  +k  k++ ++d++++++k+eG++g+++G++p+llr +p sa +f++ e++ r l
  KHJ35387.1 216 YKIAGYGGLAGEALWLSSYPFDVIKSKMQTDEFGEKM-KYKTMRDCFRQTLKKEGVSGFWKGIGPTLLRAMPVSAGTFFVAEMTSRAL 302
                 5556679***********************9999776.5666*****************************************99976 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (303 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       463  (0.0258241); expected 358.6 (0.02)
Passed bias filter:                      419  (0.02337); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.23s 00:00:00.65 Elapsed: 00:00:00.37
# Mc/sec: 2453.59
//
Query:       KHJ35388.1  [L=213]
Description: putative pap2 superfamily protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-14   53.9   2.6    2.9e-14   53.0   2.6    1.4  1  PAP2      PAP2 superfamily


Domain annotation for each model (and alignments):
>> PAP2  PAP2 superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.0   2.6   1.6e-18   2.9e-14      50     134 ..      15     106 ..       2     108 .. 0.91

  Alignments for each domain:
  == domain 1  score: 53.0 bits;  conditional E-value: 1.6e-18
        PAP2  50 keakesfPSgHsafafalalllalllrrkrkkig.......lvllalillllavlvalsRlylgvHflsDvlaGlliGialaalayrlvqkk 134
                 ++  esfPS  s++af+++++la +l+ k k ++       + +l++ ++l a l+++s  ++g H + D+l+G +iG+++ + ayr+v+ +
  KHJ35388.1  15 NNSLESFPSSQSTVAFSGFVYLAIYLNAKLKIWSnyhsamwKMALLWSPILIASLISASLTIDGFHNWYDCLVGGIIGTVMSLSAYRMVFAS 106
                 344579**************************99*****************************************************99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       496  (0.0276647); expected 358.6 (0.02)
Passed bias filter:                      318  (0.0177366); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.22s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1729.46
//
Query:       KHJ35389.1  [L=794]
Description: putative elongation factor tu gtp binding domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.7e-48  162.4   0.0    1.4e-47  161.8   0.0    1.3  1  GTP_EFTU     Elongation factor Tu GTP binding domain
    4.1e-18   65.4   2.7    1.1e-17   64.1   2.7    1.7  1  HBS1_N       HBS1 N-terminus
    5.1e-09   36.2   0.1      2e-06   27.9   0.1    2.9  1  MMR_HSR1     50S ribosome-binding GTPase
      1e-05   25.8   0.0    2.5e-05   24.6   0.0    1.7  1  GTP_EFTU_D2  Elongation factor Tu domain 2
    0.00018   21.7   0.1      0.025   14.8   0.0    2.8  2  Roc          Ras of Complex, Roc, domain of DAPkinase
     0.0004   20.7   0.0      0.001   19.4   0.0    1.8  1  GTP_EFTU_D3  Elongation factor Tu C-terminal domain
     0.0012   18.4   0.1      0.014   15.0   0.0    2.2  2  Ras          Ras family
      0.003   17.0   0.1       0.16   11.4   0.1    2.5  1  SRPRB        Signal recognition particle receptor beta subuni
     0.0057   15.9   2.7          2    7.5   0.3    2.7  3  G-alpha      G-protein alpha subunit
  ------ inclusion threshold ------
      0.016   14.7   1.8        1.2    8.6   0.0    3.0  3  Arf          ADP-ribosylation factor family
       0.03   14.2   0.9      0.088   12.7   0.1    2.1  2  GTP_EFTU_D4  Elongation factor Tu domain 4
      0.054   13.0   0.1        1.5    8.3   0.1    2.7  2  FeoB_N       Ferrous iron transport protein B
      0.087   12.1   0.0       0.18   11.0   0.0    1.4  1  Septin       Septin
      0.088   13.2   0.0       0.36   11.2   0.0    1.9  2  GAF_3        GAF domain
        2.5    8.9   5.6        4.7    8.0   0.0    3.3  3  FliD_N       Flagellar hook-associated protein 2 N-terminus


Domain annotation for each model (and alignments):
>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.8   0.0   1.2e-50   1.4e-47       1     183 [.     383     591 ..     383     665 .. 0.88

  Alignments for each domain:
  == domain 1  score: 161.8 bits;  conditional E-value: 1.2e-50
                 TCEEEEEEEESTTSSHHHHHHHHHHHTTSSCHHHHHH..HHHST.............HCHSHHHHHHTSCSSCEEEEEETTCSSEEEEEEEESSSGGGH CS
    GTP_EFTU   1 krirnigiighvDhGKtTLtdrLlyktgaiskkgeka..eeerv.............lDtlkeErergiTiksaaisleketkkylinliDtPGHvdFs 84 
                 k+i+ +++ighvD+GK+TL++rLl + g+i++++ ++  ++  +             lD+ +eErerg+Ti++a  ++e  tkk+++++iD+PGH+dF+
  KHJ35389.1 383 KQIVSFVVIGHVDAGKSTLMGRLLLEVGTIDQRTVDKykKG--AeaigktsfalawvLDQGSEERERGVTIDIALNEFE--TKKTKFTIIDAPGHQDFI 477
                 57999***************************999886422..234799999***************************..****************** PP

                 HHHHHHHHT-SEEEEEEETTTB.....STHHHHHHHHHHHHTTTE.EEEEEESCGST...HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEB CS
    GTP_EFTU  85 kevirglrvlDgavlvvdaveG.....vepqteevlrlalkegvp.iivfiNKmDrl...kaelkeiveevkqklsrkeeklekygekgekevpvvfgS 174
                  ++i+g++++D+avlv+da+ G      + qt+e++ l+++ g++ +i+++NK+D++   ++++ ei ++++ ++      l+ +g+k+e +++++++S
  KHJ35389.1 478 PNMIAGASQADFAVLVIDASTGsfesgLKGQTKEHALLVRSIGIQrLIIAVNKLDNVqwsQDRFMEIETQMS-SF------LTTAGYKRE-NFSFLPCS 568
                 ********************7777777********************************99**********9.66......689999996.******** PP

                 TTTTBTHH..............H CS
    GTP_EFTU 175 alkgegvk..............t 183
                 +l g++++              +
  KHJ35389.1 569 GLIGDNISlpisnpaaswykgpN 591
                 *****997555555555555552 PP

>> HBS1_N  HBS1 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.1   2.7   8.8e-21   1.1e-17       1      78 []      17      95 ..      14      95 .. 0.84

  Alignments for each domain:
  == domain 1  score: 64.1 bits;  conditional E-value: 8.8e-21
      HBS1_N  1 ddyds.eddeeeeeee..eLsdedqarLrscldevrevLgeeaskvtvtekqikeAlwkyyyDvekaldyllnkfkkkkpk 78
                ddyd+ ed+++  e e   L++edq+++   + +vr+ L+  +s + +t+  i+++lw+ yyDv+k+++yl++ + +k++k
  KHJ35389.1 17 DDYDGgEDYDYSSEGEskGLNEEDQEKMTVSTIAVRASLP--SSMEYLTDDVIHDSLWYTYYDVDKTVAYLVRAYASKTTK 95
                677776333333333369**********************..444558****************************99986 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.9   0.1   1.6e-09     2e-06       3     100 ..     389     515 ..     387     530 .. 0.70

  Alignments for each domain:
  == domain 1  score: 27.9 bits;  conditional E-value: 1.6e-09
                 EEEESTTSSHHHHHHHHH................T...............STEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHH CS
    MMR_HSR1   3 aivGrpNvGKStLinalt................g...............ekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaf 70 
                 +++G+  +GKStL+ +l+                g               ++   +++ g+T+di   ++++k+++++++D pG  +    +  + + +
  KHJ35389.1 389 VVIGHVDAGKSTLMGRLLlevgtidqrtvdkykkGaeaigktsfalawvlDQGSEERERGVTIDIALNEFETKKTKFTIIDAPG--H----QDFIPNMI 481
                 799**************977777766666665550555566666665554577888999******999999999**********..3....23467777 PP

                 HHHHCTSEEEEEEETT....TTCSHHHHHHHHHH CS
    MMR_HSR1  71 laleeadlillvvdas....eeklkpldeeleel 100
                 +   +ad ++lv+das    e++lk + +e + l
  KHJ35389.1 482 AGASQADFAVLVIDAStgsfESGLKGQTKEHALL 515
                 777789********99666633454444444333 PP

>> GTP_EFTU_D2  Elongation factor Tu domain 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.6   0.0   2.1e-08   2.5e-05       4      74 .]     628     692 ..     626     692 .. 0.93

  Alignments for each domain:
  == domain 1  score: 24.6 bits;  conditional E-value: 2.1e-08
                  EEEEEEESEEETTEEEEEECTCTTSEEEEEEEEEEEEETEEESEEETTSEEEEEEEESSCCSGSSTTCEEE CS
  GTP_EFTU_D2   4 algrvysGtlkkGdevrilgndtskkeivtrissletfhededeavaganaGvivaikgledaiivGdtlt 74 
                  + gr++ G l++ d + +  +++s+   v+ +++le  ++ +d+avag+n+ + +  ++  + +++G++++
   KHJ35389.1 628 ISGRIEAGSLQVADALIV--QPSSQ---VCNVRALELDNKLVDWAVAGQNVVIHLTDIEEQH-LKIGNVIC 692
                  579***************..88745...5***************************999999.9*****98 PP

>> Roc  Ras of Complex, Roc, domain of DAPkinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   0.0     0.053        63       3      20 ..     389     406 ..     387     418 .. 0.86
   2 !   14.8   0.0   2.1e-05     0.025       6     119 ..     423     532 ..     422     533 .. 0.74

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.053
                 EEESSTTSSHHHHHHCHC CS
         Roc   3 vlvGdsgvGKtsllkrfv 20 
                 v++G   +GK++l+ r++
  KHJ35389.1 389 VVIGHVDAGKSTLMGRLL 406
                 89************9987 PP

  == domain 2  score: 14.8 bits;  conditional E-value: 2.1e-05
                 SSTTSSHHHHHHCHCT-CCC-EEETTTTEEEEEEECGGSGGCTTBTTTTCEEEEEEEE-SGGCTTTT-HHHHCTSCEEEEEEEGHH..H.HCHHHHHHH CS
         Roc   6 GdsgvGKtsllkrfvedkfsekekstigvdfltkevtkikgvendkkvkkvklniWDtaGqerfrslhplylreaalailvydsrs..s.enlkeWlke 101
                 G +++GKts++  +v d+ se+++  + +d++ +e++          +kk k+ i D  G+++f   +    ++a+ a+lv+d+++  + + lk   ke
  KHJ35389.1 423 GAEAIGKTSFALAWVLDQGSEERERGVTIDIALNEFE----------TKKTKFTIIDAPGHQDFIPNMIAGASQADFAVLVIDASTgsFeSGLKGQTKE 511
                 78899********************999999887762..........24578*************999999************6641132334433333 PP

                 ...HHHHCSSS-EEEEEE-TT CS
         Roc 102 ...lkkvagkspvilvgnkiD 119
                    l +  g + +i+ +nk+D
  KHJ35389.1 512 halLVRSIGIQRLIIAVNKLD 532
                 000333344456677778877 PP

>> GTP_EFTU_D3  Elongation factor Tu C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   0.0   8.3e-07     0.001      28     107 ..     723     792 ..     697     794 .] 0.74

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 8.3e-07
                  EEEEESSS-EEEEEEEEEEECCSSTTSB-BS.S-SSCCSTT-CEEEEEEECCEEEE--TTTHCCCCEEEEECTTCEEEEEE CS
  GTP_EFTU_D3  28 rpvlyirtadvtgkvveLlskldkktekvse.kkpefvkpGdnvivevelikpialekgseypqlGrFaiReggrTvaaGv 107
                  r +l     + +g+++e++   +k++++  + kkp+++kpG+ + v v+l++   le+        r  +R +g TvaaG 
   KHJ35389.1 723 RGQL-----HSSGRIKEIKGIFNKSSDQILNkKKPRVIKPGMVARVIVTLERDEPLESPA------RIVLRSNGVTVAAGF 792
                  3333.....4567777887778888888765489**************************......*************96 PP

>> Ras  Ras family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.1      0.29   3.5e+02       2      18 ..     388     404 ..     387     409 .. 0.88
   2 !   15.0   0.0   1.2e-05     0.014       6     150 ..     423     576 ..     422     586 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.29
                 EEEEESTTSSHHHHHHH CS
         Ras   2 lvlvGdsavGKtslllr 18 
                 +v++G    GK++l+ r
  KHJ35389.1 388 FVVIGHVDAGKSTLMGR 404
                 69************976 PP

  == domain 2  score: 15.0 bits;  conditional E-value: 1.2e-05
                 ESTTSSHHHHHHHHHHSSCSSSCTTTSSEEEEEEEEEETTEEEEEEEEEETTSGGGHHHHHHHHTTESEEEEEEETTBHHHHHT.HH.HHHHHHHHHST CS
         Ras   6 GdsavGKtslllrfvkdkFkeeyesTigvdfytkeievdgkevkleiwDTAGqeefkslrelyyrdaegillvyditsresfen.vk.kwveeikrvae 102
                 G +a+GKts+ l +v d+ +ee e  + +d   +e+  + k+ k++i D  G ++f     +  ++a+ ++lv d  s+ sfe+ +k +  e+   v +
  KHJ35389.1 423 GAEAIGKTSFALAWVLDQGSEERERGVTIDIALNEF--ETKKTKFTIIDAPGHQDFIPNMIAGASQADFAVLVIDA-STGSFESgLKgQTKEHALLVRS 518
                 889**********************99888877765..5678899***********99999999999999999995.5567775233222222222222 PP

                 .TTSEEEEEEETTTGGG.........G-SS-HHHHHHHHHHHTSEEEEEBTTTTCTHH CS
         Ras 103 .envpivLvGnKvDlee.........kravsteegeelakelglkfletSAktnenve 150
                      +++  nK D  +         + ++s     +  k+ ++ fl +S     n++
  KHJ35389.1 519 iGIQRLIIAVNKLDNVQwsqdrfmeiETQMSSFLTTAGYKRENFSFLPCSGLIGDNIS 576
                 2223455666888887777766555555555555555557777888888777777665 PP

>> SRPRB  Signal recognition particle receptor beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.4   0.1   0.00013      0.16      36      85 ..     451     496 ..     383     503 .. 0.60

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00013
                 S-EEETTG...GGTT-SEEEETT-GCCSHHHHHHHHHHGGEEEEEEEEET CS
       SRPRB  36 essaalkvksekgskltliDfPGheklrqklleklkaksslkglvfvvDS 85 
                    +al+  ++k++k+t+iD PGh+ +  +++      s++   v v+D+
  KHJ35389.1 451 I-DIALNEFETKKTKFTIIDAPGHQDFIPNMIAG---ASQADFAVLVIDA 496
                 2.22333347899************998888877...4555556666665 PP

>> G-alpha  G-protein alpha subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.5   0.3    0.0017         2      32     120 ..      94     251 ..      84     351 .. 0.62
   2 !    7.3   0.1    0.0019       2.2      12      42 ..     374     404 ..     364     432 .. 0.78
   3 ?   -1.6   0.0      0.99   1.2e+03     188     213 ..     450     474 ..     442     495 .. 0.88

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0017
                 TTSSHHHHHHHHHHHCS----HHHHHCCHHHHHHHHHHHHHHHHHHHHH.....TT........................................... CS
     G-alpha  32 seSGKsTilkqlkllykkgfseeelatwraviqlnivrsiktileales.....leselsesf.................................... 89 
                  +S Ks  +kq+k   + +f+++ +++  +  + n++++i++i e +++             f                                    
  KHJ35389.1  94 TKSTKSFAVKQVK---GVKFTDSSCNY-FSARYGNTCQHIRDISERHSKpfsyqD-------Ffkdtpwlsvpinrqttfiaplslrggllggsgssep 181
                 4677777777777...66699995555.5669*****************554440.......2344455566777777889999999999999999999 PP

                 .............HHHC-SS-SCCCS-HCHHHH....................................H CS
     G-alpha  90 .............elqelkerldplkkveasliaklssateee..........................q 120
                              ++++ ++++ +lk+ e+sl++ + s +++                           +
  KHJ35389.1 182 pkmsklqtlaanrKKMAQQQKFGNLKNTENSLNKLHMSLSKQDgasgssditpkqltprsfpirkrrmsN 251
                 9999999999999889999999999999999888777777777888777775555544333333332220 PP

  == domain 2  score: 7.3 bits;  conditional E-value: 0.0019
                 XXXXXXXXE..EEEEEEEESTTSSHHHHHHH CS
     G-alpha  12 kaerkarkkkrevkllllGqseSGKsTilkq 42 
                  +e k++++k++v+++++G+ + GKsT++  
  KHJ35389.1 374 LEEFKKQESKQIVSFVVIGHVDAGKSTLMGR 404
                 44545555579****************9755 PP

  == domain 3  score: -1.6 bits;  conditional E-value: 0.99
                 --SEEEEEEECT-TEEEEEEEE-SSH CS
     G-alpha 188 tvGisetkfevdsklefrivdvgGqr 213
                 t+ i   +fe + k++f+i+d  G++
  KHJ35389.1 450 TIDIALNEFETK-KTKFTIIDAPGHQ 474
                 777888899998.********99987 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.3      0.79   9.4e+02      73     100 ..      70      97 ..      68     105 .. 0.83
   2 ?    3.6   0.0     0.033        40       6      37 ..     378     408 ..     371     419 .. 0.77
   3 ?    8.6   0.0   0.00097       1.2      41     164 ..     446     575 ..     422     580 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.79
                 GGGGGGCTTESEEEEEEETT-CTTHHHH CS
         Arf  73 plWknYfektdavifvvDsadreRleea 100
                 +lW +Y++  ++v ++v ++ ++  +++
  KHJ35389.1  70 SLWYTYYDVDKTVAYLVRAYASKTTKST 97 
                 58***************98887766555 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.033
                 HGGTT.TTEEEEEEEESTTSSHHHHHHHHHHS CS
         Arf   6 aklklkkkelrilllGLDnaGKtTilkklkle 37 
                 +k+++ k+ +  +++G   aGK+T++ +l le
  KHJ35389.1 378 KKQES-KQIVSFVVIGHVDAGKSTLMGRLLLE 408
                 44444.7778899*************999765 PP

  == domain 3  score: 8.6 bits;  conditional E-value: 0.00097
                 ECSSSSSEEEEEEEETTEEEEEEEE-SSGGGGGGGGGGCTTESEEEEEEETT-CT...THHHHHHHHHHHCTSGCCTTSEEEEEEE-TTSTTSS-HHHH CS
         Arf  41 ttvPTigfnveeleiknlkftvwDvGGqeklRplWknYfektdavifvvDsadre...RleeakeeLkalleeeelkevallvlaNKqDlpealseeel 136
                 +   Ti    +e e+k+ kft+ D  G++   p      ++ d  + v+D++  +    l+   +e + l+++  +    l++  NK D  +  +++ +
  KHJ35389.1 446 ERGVTIDIALNEFETKKTKFTIIDAPGHQDFIPNMIAGASQADFAVLVIDASTGSfesGLKGQTKEHALLVRSIGI--QRLIIAVNKLDNVQWSQDRFM 542
                 4556999999****************************************99755222566666665555555444..4688999****9988777766 PP

                 HHHTTGGG.SS....SSSSEEEEEEBTTTTBTH CS
         Arf 137 rellglee.lk....gkrkleiqkcsavkgegl 164
                 + + ++++ l+    ++++++   cs + g+++
  KHJ35389.1 543 EIETQMSSfLTtagyKRENFSFLPCSGLIGDNI 575
                 666666654223444466777777777777665 PP

>> GTP_EFTU_D4  Elongation factor Tu domain 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.1       3.4   4.1e+03       7      49 ..     373     414 ..     369     425 .. 0.61
   2 ?   12.7   0.1   7.4e-05     0.088      12      71 ..     617     678 ..     610     691 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 3.4
                  EEEEEEEETCCCEEEEEEEEEEEEETT.-EEEETTE.EEEEEEE CS
  GTP_EFTU_D4   7 ilpgvvfrrsdpaivGvevlgGvikpg.vklikedGrevGeilq 49 
                  +l+++ +++s++++    v+ G + +g  +l+ +   evG+i q
   KHJ35389.1 373 VLEEFKKQESKQIV-S-FVVIGHVDAGkSTLMGRLLLEVGTIDQ 414
                  56666666665544.4.366677766524566666666777655 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 7.4e-05
                  EEETCCCEEEEE..EEEEEEEETT-EEEETTE.EEEEEEEEEETTEEESEEETT-EEEEEEE CS
  GTP_EFTU_D4  12 vfrrsdpaivGv..evlgGvikpgvklikedGrevGeilqiqdkgkkleeakaGqevaisie 71 
                  vfr+ ++ +v +  ++ +G +++   li +  ++v ++++++  +k ++ a aGq+v i + 
   KHJ35389.1 617 VFRSGNQNLVSIsgRIEAGSLQVADALIVQPSSQVCNVRALELDNKLVDWAVAGQNVVIHLT 678
                  888888887776447******************************************99875 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.13   1.5e+02       3      38 ..     388     420 ..     386     435 .. 0.76
   2 ?    8.3   0.1    0.0013       1.5      32      59 ..     448     475 ..     422     552 .. 0.84

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.13
                 EEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEE CS
      FeoB_N   3 valvGnpnvGkttlfnaltgakqkvgNwpGvtvekk 38 
                 ++++G  ++Gk+tl+ +l     +vg     tv+k 
  KHJ35389.1 388 FVVIGHVDAGKSTLMGRLL---LEVGTIDQRTVDKY 420
                 6899**********99885...56666666666664 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.0013
                 TSSSEEEEEEEEETTEEEEEEE----SS CS
      FeoB_N  32 GvtvekkegklklkgkeveivDlPGiYs 59 
                 Gvt++ +  ++++k+++++i+D PG  +
  KHJ35389.1 448 GVTIDIALNEFETKKTKFTIIDAPGHQD 475
                 9************************755 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00015      0.18       7      78 ..     388     479 ..     384     488 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00015
                 EEEEEBTTSSCCCCCCTTSSSS----......................--------------S-EEEEEEEEETTCEEEEEEEE---BSSSSSH CS
      Septin   7 lmvvGesglGkttlintlfetdliee......................ekleeasekkkktveikkkkvvieedgvklnltviDtpgfGdavdn 78 
                  +v+G+   Gk+tl+  l+ +  + +                        l++ se+ ++ v+i+ + ++ e +  k ++t+iD pg+ d++ n
  KHJ35389.1 388 FVVIGHVDAGKSTLMGRLLLEVGTIDqrtvdkykkgaeaigktsfalaWVLDQGSEERERGVTIDIALNEFETK--KTKFTIIDAPGHQDFIPN 479
                 6899***********99987765444488999**********99999755677788999999999999999988..67789*********9988 PP

>> GAF_3  GAF domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.0       3.2   3.9e+03      36      60 ..     582     606 ..     578     618 .. 0.84
   2 ?   11.2   0.0    0.0003      0.36      48      90 ..     655     697 ..     632     701 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 3.2
       GAF_3  36 vaagwdgkpalsesldedsalarra 60 
                 +aa+w  +p+l+esl++ +++++ +
  KHJ35389.1 582 PAASWYKGPNLVESLENLEPVTHVL 606
                 7899988888999***999998854 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 0.0003
       GAF_3  48 esldedsalarralssgevvsepsfaeedglpdraalavPLva 90 
                 ++l+ d++l ++a++ ++vv+ ++  ee+ l  +++++ PL a
  KHJ35389.1 655 RALELDNKLVDWAVAGQNVVIHLTDIEEQHLKIGNVICSPLNA 697
                 38999***********************************975 PP

>> FliD_N  Flagellar hook-associated protein 2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0       3.5   4.2e+03       4      25 ..      77      98 ..      74     124 .. 0.60
   2 ?    1.6   0.3      0.38   4.5e+02      43      89 ..     186     233 ..     182     264 .. 0.55
   3 ?    8.0   0.0    0.0039       4.7      25      52 ..     529     556 ..     519     639 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 3.5
                XXXXXXXXXXXXXXXXXXXXXX CS
      FliD_N  4 Dtdslvkqlmkaerakldkleq 25
                D+d+ v  l+ a+ +k +k ++
  KHJ35389.1 77 DVDKTVAYLVRAYASKTTKSTK 98
                5555555555555555554332 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.38
                 HHHHHHHHHHHHXXGGGGGXEEEEECSTTTEEEEEET.TS-SEEEEEE CS
      FliD_N  43 klsnlksalsalsksstfsakkatssdesvvtatass.gaaagsysie 89 
                 kl++l  + ++++++++f + k t ++ + + ++ s+ + a+gs +i+
  KHJ35389.1 186 KLQTLAANRKKMAQQQKFGNLKNTENSLNKLHMSLSKqDGASGSSDIT 233
                 333333333344444455443333222233333332223444444444 PP

  == domain 3  score: 8.0 bits;  conditional E-value: 0.0039
                 XXXXXXXXXHHHHHHHHHHHHHHHHHHH CS
      FliD_N  25 qkktklewkqsayrelnsklsnlksals 52 
                 +k  +++w q+ + e+++++s++ +++ 
  KHJ35389.1 529 NKLDNVQWSQDRFMEIETQMSSFLTTAG 556
                 677899*******************663 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (794 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       705  (0.0393218); expected 358.6 (0.02)
Passed bias filter:                      475  (0.0264934); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.68u 0.20s 00:00:00.88 Elapsed: 00:00:00.37
# Mc/sec: 6445.80
//
Query:       KHJ35390.1  [L=904]
Description: putative protein required for cell viability [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.9e-25   87.6   1.3    3.7e-24   85.1   0.1    3.1  3  RTP1_C1         Required for nuclear transport of RNA pol II 
    4.2e-08   32.7   0.2    9.3e-08   31.6   0.2    1.6  1  RTP1_C2         Required for nuclear transport of RNA pol II 
  ------ inclusion threshold ------
      0.027   14.9   2.9        7.3    7.1   0.5    4.1  3  Telomere_reg-2  Telomere length regulation protein
      0.033   14.2   0.0      0.033   14.2   0.0    3.2  4  Cnd1            non-SMC mitotic condensation complex subunit 
      0.036   13.8   0.9      0.075   12.8   0.9    1.5  1  DUF777          Borrelia burgdorferi protein of unknown funct
      0.046   13.6   0.1       0.28   11.1   0.1    2.4  1  DUF1981         Domain of unknown function (DUF1981)


Domain annotation for each model (and alignments):
>> RTP1_C1  Required for nuclear transport of RNA pol II C-terminus 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.0       1.7   5.2e+03      12      29 ..      79      96 ..      74     134 .. 0.65
   2 ?   -2.9   0.0       2.5   7.5e+03      58      77 ..     418     437 ..     399     456 .. 0.64
   3 !   85.1   0.1   1.2e-27   3.7e-24       3     108 ..     554     659 ..     552     662 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 1.7
     RTP1_C1 12 llpvrahglvlLrkliek 29
                ++p+ra+g++   + i +
  KHJ35390.1 79 QVPLRANGVQDTIEFILS 96
                678888887765555544 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.5
     RTP1_C1  58 LnaikgLvaLadvfpeevlk 77 
                 L   ++L +L++  pe+ ++
  KHJ35390.1 418 LIELNVLQKLITELPEKLIE 437
                 44455555555555554443 PP

  == domain 3  score: 85.1 bits;  conditional E-value: 1.2e-27
     RTP1_C1   3 ealkdlqdp..llpvrahglvlLrkliekkskeavldiekilkllleaLkdedsYvYLnaikgLvaLadvfpeevlklLleeyeeenekeslderlkvG 99 
                  al+++++p   +pvr++gl lL++l+e +s  +++d+++ +++l + L de++Yv+L +ik+Lv+L +++p+++++ ++++y + ne+ +ld+rl++G
  KHJ35390.1 554 LALSYITSPesPPPVRVQGLELLSSLLEVNS--PIIDVPSFVTILTSILVDEEEYVHLRVIKLLVQLSHKHPKTTIRDIIDRYVDPNEECELDQRLRLG 650
                 57888888844589*****************..****************************************************************** PP

     RTP1_C1 100 EaLlrvirr 108
                 EaL ++++ 
  KHJ35390.1 651 EALHQILQS 659
                 *****9986 PP

>> RTP1_C2  Required for nuclear transport of RNA pol II C-terminus 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.2   3.1e-11   9.3e-08       3      33 ..     829     859 ..     828     860 .. 0.94

  Alignments for each domain:
  == domain 1  score: 31.6 bits;  conditional E-value: 3.1e-11
     RTP1_C2   3 edlyrtLkyVedtDtDdlVReHArdvLEeLe 33 
                  d+ r+ ky e+tD+D lVReH++ v+E+Le
  KHJ35390.1 829 ADVRRIMKYAERTDNDNLVREHCKTVIESLE 859
                 589999************************9 PP

>> Telomere_reg-2  Telomere length regulation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.8   0.0      0.11   3.2e+02      39      73 ..     280     314 ..     273     327 .. 0.69
   2 ?    7.1   0.5    0.0025       7.3      15      68 ..     412     465 ..     404     487 .. 0.77
   3 ?    2.6   0.0     0.062   1.9e+02      57     101 ..     602     649 ..     560     655 .. 0.75

  Alignments for each domain:
  == domain 1  score: 1.8 bits;  conditional E-value: 0.11
  Telomere_reg-2  39 eenaveLataLltledkfdienfeelrlnalvall 73 
                     ++ a++L+++Ll+l+ + + ++ ++l    l +++
      KHJ35390.1 280 RKPAKKLLKMLLHLSSNNKDKTHKSLLNTILENII 314
                     556899********999665555555444444444 PP

  == domain 2  score: 7.1 bits;  conditional E-value: 0.0025
  Telomere_reg-2  15 ddyekieaaLksaeeLirrkadeveenaveLataLltledkfdienfeelrlna 68 
                     d+   + + L+++++Li + ++++ en+++L++   ++ +  +++n++e    a
      KHJ35390.1 412 DNERVHLIELNVLQKLITELPEKLIENSKQLLEFTYHILNCSNESNYSEANYDA 465
                     4555566789**************999999998777777777777777665555 PP

  == domain 3  score: 2.6 bits;  conditional E-value: 0.062
  Telomere_reg-2  57 dienfeelr.lnalvallvatpekvaeylteeffs..nqyslqqRidi 101
                     d+e++ +lr ++ lv+l  ++p+++++ +++++++  +++ l qR+ +
      KHJ35390.1 602 DEEEYVHLRvIKLLVQLSHKHPKTTIRDIIDRYVDpnEECELDQRLRL 649
                     34444444426899*******************997788999999876 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.2       2.8   8.4e+03     110     127 ..     296     313 ..     272     323 .. 0.41
   2 ?   -2.8   1.4       1.9   5.6e+03      67     116 ..     348     397 ..     337     460 .. 0.57
   3 ?   14.2   0.0   1.1e-05     0.033      35     132 ..     566     662 ..     562     679 .. 0.88
   4 ?   -3.3   0.0       2.8   8.3e+03      32      48 ..     842     858 ..     838     872 .. 0.70

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 2.8
        Cnd1 110 ecsewgqitilefLlsyi 127
                 + + ++ ++ l+++l+ i
  KHJ35390.1 296 NNKDKTHKSLLNTILENI 313
                 222223333333333333 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 1.9
        Cnd1  67 leDenprVvanalaalteiseksenaiynllpdiisklsdalnecsewgq 116
                 ++D + + ++na+ ++  ++++++++  ++    +s  s+ l e se++ 
  KHJ35390.1 348 IDDIDLQSMNNAIDFFISLLRENTQMSSEVSVLFASLGSKWLAENSEESH 397
                 55555555566666666666665444444444444444444444444433 PP

  == domain 3  score: 14.2 bits;  conditional E-value: 1.1e-05
        Cnd1  35 pyVRktaaivvakL..ilndmvkekgflselaklleDenprVvanalaalteiseksenaiynllpdiisklsdalnecsewgqitilefLlsyipkdk 131
                 p VR + + +++ L  ++  ++ +  f+  l ++l De++ V   ++ +l ++s+k ++++    +dii +++d  +ec+ +++    e+L +  ++++
  KHJ35390.1 566 PPVRVQGLELLSSLleVNSPIIDVPSFVTILTSILVDEEEYVHLRVIKLLVQLSHKHPKTT---IRDIIDRYVDPNEECELDQRLRLGEALHQILQSNT 661
                 67999999999***88888999**********************************97655...5799999999999********99999999888776 PP

        Cnd1 132 q 132
                 +
  KHJ35390.1 662 S 662
                 5 PP

  == domain 4  score: -3.3 bits;  conditional E-value: 2.8
        Cnd1  32 DedpyVRktaaivvakL 48 
                 D+d  VR+++  v+  L
  KHJ35390.1 842 DNDNLVREHCKTVIESL 858
                 77777777776666555 PP

>> DUF777  Borrelia burgdorferi protein of unknown function (DUF777)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.9   2.5e-05     0.075      59     128 ..     420     489 ..     367     497 .. 0.85

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 2.5e-05
      DUF777  59 dleiktrnisnlklelsegdevvllqssinifdk.nddnhfdkhyfyilsaislknvtikvdkfkiktknl 128
                 +l++  + i++l  +l e+ + + l  +  i++  n+ n+ + +y  i  a+sl nvti++ +f+i tkn 
  KHJ35390.1 420 ELNVLQKLITELPEKLIENSKQL-LEFTYHILNCsNESNYSEANYDAIPIALSLLNVTITATSFRITTKNR 489
                 689999999999999*9999875.5677777776156689999**************************95 PP

>> DUF1981  Domain of unknown function (DUF1981)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   9.4e-05      0.28      15      57 ..     284     327 ..     272     329 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 9.4e-05
     DUF1981  15 kefLkPFeeimsnnssaeirelvlecveqliqsraeni.ksGWk 57 
                 k++Lk + +++snn++++ + l+  ++e++i  r ++i k GWk
  KHJ35390.1 284 KKLLKMLLHLSSNNKDKTHKSLLNTILENIICERQNEIlKRGWK 327
                 899*****************************9888888****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (904 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       671  (0.0374254); expected 358.6 (0.02)
Passed bias filter:                      399  (0.0222544); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.65u 0.26s 00:00:00.91 Elapsed: 00:00:00.40
# Mc/sec: 6839.93
//
Query:       KHJ35391.1  [L=1188]
Description: putative snf2-family atp dependent chromatin remodeling factor snf21 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-72  243.8   0.8      2e-72  243.8   0.8    1.9  2  SNF2_N       SNF2 family N-terminal domain
    5.5e-21   74.7   9.4    5.5e-21   74.7   9.4    4.4  5  HSA          HSA
    6.4e-21   74.8   1.5    8.1e-19   68.0   0.0    4.1  5  Helicase_C   Helicase conserved C-terminal domain
    6.9e-20   70.9   1.3    1.8e-19   69.6   1.3    1.7  1  Bromodomain  Bromodomain
    1.5e-12   47.9   0.3    1.5e-12   47.9   0.3    4.6  5  SnAC         Snf2-ATP coupling, chromatin remodelling complex
      5e-10   39.6   0.0      5e-10   39.6   0.0    3.7  4  ResIII       Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.8   4.1       5.5   1.6e+04     265     338 ..      83     158 ..      59     165 .. 0.57
   2 !  243.8   0.8   6.8e-76     2e-72      49     349 ..     319     603 ..     307     604 .. 0.87

  Alignments for each domain:
  == domain 1  score: -5.8 bits;  conditional E-value: 5.5
                 STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH......................HHHHHH-HH.H-HHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxx.xxxxxxxx RF
      SNF2_N 265 qrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkal..akllkrseaalksssksk.ekilelll 338
                 + l l++ +k++ + +  +  +   l +++   + Y r+++++  +a+   kl k+++ a +  +k+k +  l+++l
  KHJ35391.1  83 KMLSLFQKQKNLRERIGSQAIQYDNLAMTANRSH-YRRMKKQSLREARitEKLEKQQRDARETREKKKhNDYLQMIL 158
                 3445566777778888888888888888876555.665555544443311444455544444444444444555554 PP

  == domain 2  score: 243.8 bits;  conditional E-value: 6.8e-76
                 HHHHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.......S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH------------- CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  49 aeakqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkekkrkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkkmkkkntkvapkll 147
                 +++++++ +GiLaDemGLGKT+q++++++   +  ek+++       +gp+L++vP s+l++W  e+e+++++ +   +vy+g    + +++++++   
  KHJ35391.1 319 ISLYNNNLNGILADEMGLGKTIQTISMLT---YLVEKKNQ-------QGPFLVIVPLSTLTNWNLEFEKWAPGLQK--VVYKGPP--MARKQQQQQLRY 403
                 6789999**********************...76555554.......5************************9975..5555543..455567788888 PP

                 ----EEEE-HHHHHHHT......TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH.---S-EEEE-S--SSS-HHHHHHHHHHH-TTTT--HHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 148 adydvvittYdvlsreaelqkkrsvlkqvewkrvvlDEghtlknstskaaeavsk.LstsnrwiltGTPiqnsledlygLlkfLreepfgekqtfdkll 245
                  +++v++ttY+++ ++         l++++w  +++DEgh++kns sk++ ++ + +st++r+iltGTP+qn+l +l++Ll+f+ + +f++ ++fd+++
  KHJ35391.1 404 GNFQVLLTTYEYIIKDR------PILSKIKWIHMIIDEGHRMKNSSSKLSATLTQyYSTRYRLILTGTPLQNNLPELWALLNFVLPTIFKSVKSFDEWF 496
                 99************777......9*****************************99899***************************************** PP

                 HHHHH............HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH....................HHHHHH-HHH- CS
                 xxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N 246 qrpie............aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrkkalakllkrseaalkssskskek 332
                 ++p++            +++   ++rL+++l++++lrr kkdvek+lP+kte++i +k+s+ + ++Y+   ++ +++ l ++        k +++    
  KHJ35391.1 497 NTPFAntggqdkmelteEEQILVIRRLHKVLRPFLLRRLKKDVEKDLPDKTEKVIKCKFSALQSRLYK---QMVTHNKLVVSD------GKGGKTGARG 586
                 *************99888888899********************************************...333223222222......2222222233 PP

                 HHHHHHHHHHHHH---X CS
                 xxxxxxxxxxxxxxxxx RF
      SNF2_N 333 ilelllelrqacnhpql 349
                 + +++++lr+ cnhp +
  KHJ35391.1 587 LSNMIMQLRKLCNHPFV 603
                 7899**********976 PP

>> HSA  HSA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.8   3.5         6   1.8e+04      47      68 ..     116     137 ..     114     138 .. 0.76
   2 !   74.7   9.4   1.8e-24   5.5e-21       1      71 []     139     209 ..     139     209 .. 0.98
   3 ?   -0.0   0.0      0.38   1.1e+03      16      46 ..     563     593 ..     558     596 .. 0.91
   4 ?   -4.7   5.0         6   1.8e+04      54      70 ..     918     934 ..     913     934 .. 0.69
   5 ?   -4.1   1.5         6   1.8e+04      50      58 ..    1036    1044 ..    1028    1046 .. 0.50

  Alignments for each domain:
  == domain 1  score: -5.8 bits;  conditional E-value: 6
                 HH--XXXXXXXXXXXXXXXXXX CS
         HSA  47 yhnniekeeqkriereekerlk 68 
                 + ++++k+  ++ + +ek +++
  KHJ35391.1 116 HYRRMKKQSLREARITEKLEKQ 137
                 7788888888888888888776 PP

  == domain 2  score: 74.7 bits;  conditional E-value: 1.8e-24
                 XXXXXXXXX--HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH--XXXXXXXXXXXXXXXXXXX.. CS
         HSA   1 rqeperrqkthhdylLeeilwhakdfkeerkskrakakklaravakyhnniekeeqkriereekerlkalk 71 
                 r+++e r+k++h ++L+ il+h+k++++   ++r k++kl+r++++ h+niekeeqkrier++k+rl+alk
  KHJ35391.1 139 RDARETREKKKHNDYLQMILNHSKEVIDGGANQRYKISKLGRMMLAAHQNIEKEEQKRIERTAKQRLQALK 209
                 689******************************************************************97 PP

  == domain 3  score: -0.0 bits;  conditional E-value: 0.38
                 HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         HSA  16 Leeilwhakdfkeerkskrakakklaravak 46 
                  ++++ h k +  + k  ++ a+ l+ ++++
  KHJ35391.1 563 YKQMVTHNKLVVSDGKGGKTGARGLSNMIMQ 593
                 579**************************98 PP

  == domain 4  score: -4.7 bits;  conditional E-value: 6
                 XXXXXXXXXXXXXXXX. CS
         HSA  54 eeqkriereekerlkal 70 
                 ++q r  r+e++rlk++
  KHJ35391.1 918 RKQARRDRREQNRLKRA 934
                 56777778888888764 PP

  == domain 5  score: -4.1 bits;  conditional E-value: 6
                  -XXXXXXXX CS
         HSA   50 niekeeqkr 58  
                  ++e ee+kr
  KHJ35391.1 1036 EGEEEEEKR 1044
                  334444444 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0       1.3   3.9e+03      15      35 ..      34      54 ..      25      94 .. 0.65
   2 ?   -0.1   0.4      0.39   1.2e+03      22      70 ..     105     154 ..      75     159 .. 0.70
   3 ?   -2.1   0.1       1.6   4.8e+03      37      64 ..     176     203 ..     147     208 .. 0.68
   4 ?    1.4   0.0      0.13   3.8e+02       3      73 ..     343     412 ..     341     415 .. 0.77
   5 !   68.0   0.0   2.7e-22   8.1e-19       2     111 .]     627     740 ..     626     740 .. 0.91

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 1.3
                TTSEEEEEESSHHHHHHHHHH CS
  Helicase_C 15 eggkilifvntidrlekvkll 35
                 +++i+if + + rl++++ l
  KHJ35391.1 34 TERDIIIFNRMQARLSELRSL 54
                567899999999998654443 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.39
                 EESSHHHHHH..HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEE CS
  Helicase_C  22 fvntidrlek..vklllekkgikvavlhgelpqnereeileqfnkgesdvL 70 
                 + n   ++++   + + +k++++ a+++ +l++++r++  ++ +k++ d+L
  KHJ35391.1 105 YDNLAMTANRshYRRM-KKQSLREARITEKLEKQQRDARETREKKKHNDYL 154
                 4444443333333455.4557999999**********99999988888777 PP

  == domain 3  score: -2.1 bits;  conditional E-value: 1.6
                 HHTTSTEEEESTTSTHHHHHHHHHHHHT CS
  Helicase_C  37 ekkgikvavlhgelpqnereeileqfnk 64 
                 +k g  +++ h +++++e+++i +  ++
  KHJ35391.1 176 SKLGRMMLAAHQNIEKEEQKRIERTAKQ 203
                 2458888899999999999999887754 PP

  == domain 4  score: 1.4 bits;  conditional E-value: 0.13
                 HHHHHHHHHHTTTTSEEEEEESSHHHHHH.HHHHHHHT..TSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEES CS
  Helicase_C   3 leallellkleeeggkilifvntidrlek.vklllekk..gikvavlhgelpqnereeileqfnkgesdvLiat 73 
                 +++l++l+++++++g  l++v+  +  +  +++ +     g++ +v+ g  p   r++  +q + g+++vL++t
  KHJ35391.1 343 ISMLTYLVEKKNQQGPFLVIVPLSTLTNWnLEFEK--WapGLQKVVYKG--PPMARKQQQQQLRYGNFQVLLTT 412
                 66788888889999999999999985532222222..245888889999..999999999***********998 PP

  == domain 5  score: 68.0 bits;  conditional E-value: 2.7e-22
                 HHHHHHHHH.HHTTTTSEEEEEESSHHHHHHHHHHHHHTTSTEEEESTTSTHHHHHHHHHHHH..TTSSS.EEEESGGGTSSSTSTTESEEEESSSSSS CS
  Helicase_C   2 kleallell.kleeeggkilifvntidrlekvklllekkgikvavlhgelpqnereeileqfn..kgesd.vLiatdvaerGidipkvnlVinfdlprn 96 
                 k+e l + l k +++g+++l+f + +  ++ ++ +l+ +gi++++l+g++++++r + l++fn  +  +  +L++t++++ G++++ +++Vi++d ++n
  KHJ35391.1 627 KFELLERVLpKYQRSGHRVLMFFQMTAIMDIMEDFLRYRGIQFLRLDGTTKSDDRSDLLREFNapNSPYFmFLLSTRAGGLGLNLQTADTVIIYDSDWN 725
                 5667777778999**************888888888999************************664555569*************************** PP

                 HHHHHHHHTTSSSTT CS
  Helicase_C  97 vtsyiqriGRtgRag 111
                 +++  q+ +R++R+g
  KHJ35391.1 726 PHQDLQAQDRAHRIG 740
                 *************97 PP

>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.6   1.3     6e-23   1.8e-19      11      82 ..    1044    1115 ..    1038    1117 .. 0.94

  Alignments for each domain:
  == domain 1  score: 69.6 bits;  conditional E-value: 6e-23
                   TTCGGGGCSTT-GCCSTTHHHH.SS---HHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHSHTTSHHHHHH CS
  Bromodomain   11 hklaepFlepvdpeefpdyyavikkPldLstIkkklesnkYksladfeadlkllfsNarkyngegsviyela 82  
                   + +  pF+  ++++ f dyy +ik+P+ +++I++k+++++Y+sl d+++d+kll+sNa++yn++gs iy +a
   KHJ35391.1 1044 RLIIGPFINLPSKKDFYDYYNIIKQPIAMKQIQRKIKKEEYSSLNDLKQDIKLLCSNAKTYNEDGSMIYIDA 1115
                   557789***************************************************************988 PP

>> SnAC  Snf2-ATP coupling, chromatin remodelling complex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.1   3.1         6   1.8e+04      47      64 ..     132     149 ..     114     153 .. 0.56
   2 ?   -1.3   0.2       1.1   3.4e+03      38      65 ..     268     295 ..     258     296 .. 0.77
   3 !   47.9   0.3   5.1e-16   1.5e-12      20      77 .]     850     902 ..     821     902 .. 0.79
   4 ?   -1.8   1.6       1.7   5.1e+03      14      50 ..     920     958 ..     907     975 .. 0.59
   5 ?   -1.7   0.3       1.6   4.7e+03      22      56 ..    1007    1040 ..     993    1045 .. 0.53

  Alignments for each domain:
  == domain 1  score: -5.1 bits;  conditional E-value: 6
                 HHHHHHHHHH-XXXXXXX CS
        SnAC  47 keeldeqlygrgkRaRke 64 
                 ++ +++q ++r  R++k+
  KHJ35391.1 132 EKLEKQQRDARETREKKK 149
                 333344556667777765 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 1.1
                 -------HHHHHHHHHHHH-XXXXXXXX CS
        SnAC  38 dgveekkeekeeldeqlygrgkRaRkev 65 
                 ++++ ++++++  + ++y+  +R ++ev
  KHJ35391.1 268 ESDNDEEQDQDTRKIDYYAVAHRIKEEV 295
                 4566777788888999999999999998 PP

  == domain 3  score: 47.9 bits;  conditional E-value: 5.1e-16
                 ----SS-------------------HHHHHHHHHHHH-XXXXXXXXXXXXXXXXXXXX CS
        SnAC  20 plpsRLleeseLPefyekdgveekkeekeeldeqlygrgkRaRkevsYeDqlTEeefl 77 
                 ++ +RL+ eseLPe+y  d     ++  +++ e++ grg+R+R  v+Y+D+lTEe++l
  KHJ35391.1 850 KRVPRLMIESELPEIYMSD-----GNPINDEPEEVKGRGARERTRVRYDDGLTEEQWL 902
                 4568**************8.....44444457779**********************7 PP

  == domain 4  score: -1.8 bits;  conditional E-value: 1.7
                 ......----SS------------..-------HHHHHH CS
        SnAC  14 dgserkplpsRLleeseLPefyek..dgveekkeekeel 50 
                 ++ + ++ ++RL    e+P  +e+  +g +e +ee e +
  KHJ35391.1 920 QARRDRREQNRLKRAGEIPGSIENspSGSRESSEELEPT 958
                 222223447899999999999999433444444444433 PP

  == domain 5  score: -1.7 bits;  conditional E-value: 1.6
                  --SS------------....-------HHHHHHHHHHHH CS
        SnAC   22 psRLleeseLPefyek....dgveekkeekeeldeqlyg 56  
                  + RLl +  L ++y      +  e ++e++e+     ++
  KHJ35391.1 1007 RHRLLLQLALRNVYDSllalE-SESEDEYEEG----EEE 1040
                  578888888888888855331.2222222222....222 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   2.1      0.71   2.1e+03      66     123 ..     134     204 ..     114     235 .. 0.63
   2 ?   -1.9   0.1      0.99   2.9e+03      65     105 ..     245     281 ..     238     303 .. 0.71
   3 !   39.6   0.0   1.7e-13     5e-10       3     169 ..     306     466 ..     304     468 .. 0.81
   4 ?   -1.2   0.4      0.58   1.7e+03      56     146 ..     746     832 ..     730     842 .. 0.45

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.71
                 HHHHHHHHGGGGTGG............GEEEESSS-B--.......-SEEEEEHHHHHHTH........... CS
      ResIII  66 lleqtleefkkflseayke........igkkvsgdkkkakekdstnkkilvttiqsldadseee......ee 123
                 l +q +++ +   ++++++         +++++g  +++  k s+  +++++  q + ++++++      ++
  KHJ35391.1 134 LEKQQRDARETREKKKHNDylqmilnhSKEVIDGGANQR-YKISKLGRMMLAAHQNIEKEEQKRiertakQR 204
                 555555555555555555566566664555566665555.56667777777777777777755565554322 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.99
                 HHHHHHHHHGGGGTGG....GEEEESSS-B--.......-S CS
      ResIII  65 slleqtleefkkflseaykeigkkvsgdkkkakekdstnkk 105
                 s+ eq +++ +++ +++ +++ ++ ++d+++     ++++k
  KHJ35391.1 245 SVKEQQRKAAERYGDNTSTFVDEESDNDEEQD----QDTRK 281
                 57788888888888888777666666665555....33333 PP

  == domain 3  score: 39.6 bits;  conditional E-value: 1.7e-13
                 EE-HHHHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S......-EEEEESSHHHHHHHHHHGGGGTGG......GEEEESSS-B--.. CS
      ResIII   3 elreyQeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkee.kflflvprkslleqtleefkkflseayke..igkkvsgdkkkake 98 
                 +l+eyQ + ++ +++ +  +++ +g+++ + G GKT+  +++  +l +k++++  fl++vp  +l+  +  ef+k+++  +k   +g     +k+++++
  KHJ35391.1 306 KLKEYQLKGLQWMISLY--NNNLNGILADEMGLGKTIQTISMLTYLVEKKNQQgPFLVIVPLSTLT-NWNLEFEKWAPGLQKVvyKG-PPMARKQQQQQ 400
                 57888888888888666..7999****************9999999988887789******98886.58899******998776422.22233333346 PP

                 .....-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS.T.TTHH.HHHT---SEEEEEESS- CS
      ResIII  99 kdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgakk.swre.ilekfkeavllglTATp 169
                  +  n ++l+tt++ + +d+         l++ +   +iiDE Hr++ ++ +  + + ++++  ++l lT+Tp
  KHJ35391.1 401 LRYGNFQVLLTTYEYIIKDR-------PILSKIKWIHMIIDEGHRMKNSSsKLSAtLTQYYSTRYRLILTGTP 466
                 789*****************.......5566677779**********97335555479**************9 PP

  == domain 4  score: -1.2 bits;  conditional E-value: 0.58
                 -EEEEESSHHHHHHHHHHGGGGTGG....GEEEESSS-B--.......-SEEEEEHHHHHHTH........HHHTTT-SEEEE...ETGGGTTS CS
      ResIII  56 kflflvprkslleqtleefkkflseaykeigkkvsgdkkkakekdstnkkilvttiqsldadseeeeeeseellrdrfdviii...DEaHrlga 146
                 ++l l+ ++s+ e+ le+ k  l +     gk+++  + ++k+++++   +l +  +++ a++   + e+ee++++  ++i+    DE H +++
  KHJ35391.1 746 RILRLISSNSVEEKILERAKFKL-DM---DGKVIQAGRFDNKSSETDRDAMLRVMLETAEAAE---NLEQEEMDDEDLNMILArseDELHLFQQ 832
                 55666666666666664432222.22...2333333333332223333333333333333333...3335555555555555444466666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1188 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1514  (0.0844442); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.83u 0.27s 00:00:01.10 Elapsed: 00:00:00.42
# Mc/sec: 8412.96
//
Query:       KHJ35392.1  [L=1020]
Description: putative ubiquitin carboxyl-terminal hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.1e-27   96.2   0.0    4.2e-27   95.3   0.0    1.5  1  UCH        Ubiquitin carboxyl-terminal hydrolase
    3.9e-06   26.7   0.0    0.00059   19.5   0.0    2.5  2  UCH_1      Ubiquitin carboxyl-terminal hydrolase
     0.0025   18.3   0.0      0.005   17.3   0.0    1.5  1  Rhodanese  Rhodanese-like domain


Domain annotation for each model (and alignments):
>> UCH  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.3   0.0     7e-31   4.2e-27       1     243 [.     655    1000 ..     655    1013 .. 0.85

  Alignments for each domain:
  == domain 1  score: 95.3 bits;  conditional E-value: 7e-31
                  -EES-SSSTHHHHHHHHHHHTSHHHHHHHHTCHHCCSSTCCCCC-.TT.TTS.TTHHHHHHHHHHHHHHSH-CCEE--HHHHHHHHHHSGG....GT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xx RF
         UCH    1 tGlsNlGntCymnsvlQcLfsipelrdyllsleevkkesrnkkelnesnplgkkgelakalkdlfkellkskskavsPkklkktlsklaks....fs 93  
                  tGlsN    Cymn v+Q L+++p +r++++++ + ++ +  + e + ++p +    ++++l+++f++l+  + + ++P+++   +++++k+    f 
  KHJ35392.1  655 TGLSNPRVLCYMNTVIQGLSATPWFRELIKNYVHPANPPIPRREGESTDPPQL---MVRCLSSIFAHLWFGQYEFINPTTFQGYVNAVHKQgprgFG 748 
                  7******************************9888887777777665555444...*************55899*******9999999999666766 PP

                  .SSSTCEHHHHHHHHHHHHHHHHCC........................HCCCHHHHHHCCCTTSHHHHHH-EEEEE.................... CS
                  .xxxxxxxxxxxxxxxxxxxxxxxx........................xxxxxxxxxxxxxxxxxxxxxxxxxxxx.................... RF
         UCH   94 .gykqqDaqEflaflLdqlhedlnr........................evaeekwkkhlkrndslitdlfegqlks.................... 145 
                   +  q+D++Efl +l+d l+++ln                         + a+  w++ +++  s+it  ++g                        
  KHJ35392.1  749 gTLVQHDCNEFLVMLIDILDDELNPlrnlpgrrpieeiegllekaptilDAAAIYWTDWTSNLGSPITCRMKGVSVRvlkcdlcgksrpvfdqfqql 845 
                  7899*********************999999999999999988888888555555555555555556555555554467777777888888888888 PP

                  .............................................EEEEEEB-SEEEEEEESEEETEEEEE--SEEB--SEEE-GGGBSS-BTTS-T CS
                  .............................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         UCH  146 .............................................klklkrlPeiLiihlkRfsynssksKlntkvefpeeldlssylaeekkkkte 197 
                                                               ++ l  +P++Lii++ R++ + +  K++t++++p++++ ++ + ++++ +t+
  KHJ35392.1  846 llavptdgtctlndildanfgpkselieyqslqcsnccqntsqkgRVFLVYMPDTLIISFMRMTNSLA--KIKTRISVPLNVNFENNVVSNQEGSTN 940 
                  888999999999999999999999999999999*******************************8777..***************999988888877 PP

                  CS-B......EEEEEEEEEES.CTTSEEEEEEEECTTTTE.......EEEEETTEEEEE- CS
                  xxxx......xxxxxxxxxxx.xxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxx RF
         UCH  198 ekkk......YeLiavvvHsG.slssGHYvayiknekngk.......WykydDetvkevk 243 
                  +  +      Y+ +++  HsG +l sGHY  ++++ ++         W ++dD  v++ +
  KHJ35392.1  941 KDYRckgpfiYDVYGLGLHSGnTLASGHYRMLARSLDQLAagkpagfWHMFDDRVVTPFN 1000
                  7776999999*********************9994444447779999*********9876 PP

>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.6   0.0    0.0036        21       2      31 ..     656     685 ..     655     692 .. 0.89
   2 !   19.5   0.0   9.9e-08   0.00059     137     319 ..     821     995 ..     750     996 .. 0.75

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.0036
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1   2 GLEnhivnsYlNslLQvlyfipplrnlals 31 
                 GL n  v +Y+N ++Q l  +p +r+l+++
  KHJ35392.1 656 GLSNPRVLCYMNTVIQGLSATPWFRELIKN 685
                 8999999******************99876 PP

  == domain 2  score: 19.5 bits;  conditional E-value: 9.9e-08
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 137 tkaettirclkCgseksrksstlvldlkyPkpsnekkeakvtfasilkssler....ekttrawCekCkryqpteqrktvknlPpvLalnakleeeeel 231
                    + +++c  Cg+ +   + +  l l  P      ++ + t+++il +++       + +   C++C + ++++ r  +  +P+ L++   + +++ l
  KHJ35392.1 821 GVSVRVLKCDLCGKSRPVFDQFQQLLLAVP------TDGTCTLNDILDANFGPkselIEYQSLQCSNCCQNTSQKGRVFLVYMPDTLIISFMRMTNS-L 912
                 555666777777777755555555555554......3456889999999998854443455778****9999999999999**********987554.4 PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 232 elwktknwlpleiklsldedknleeklkeerekakaekeikvYeLqsvvvhigdskesghLvslvkvaekelerdppesqWylFNDfl 319
                    kt+  +pl+++   ++  n+ ++++ +++k+   k+ ++Y++ ++  h g++  sgh+  l++  ++++   +p + W++F+D  
  KHJ35392.1 913 AKIKTRISVPLNVNF--EN--NVVSNQEGSTNKDYRCKGPFIYDVYGLGLHSGNTLASGHYRMLARSLDQLAA-GKPAGFWHMFDDRV 995
                 445555555555555..22..33556666667788999***************9999*********8777665.88888*******65 PP

>> Rhodanese  Rhodanese-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.3   0.0   8.4e-07     0.005       3     104 ..     358     481 ..     356     483 .. 0.62

  Alignments for each domain:
  == domain 1  score: 17.3 bits;  conditional E-value: 8.4e-07
   Rhodanese   3 kelkellekgkva....llDvRppeeYekghI..pgAvnv....skdtlsrakkseapllelpeellel.gidnkktvvvycdgggraaaaaallk... 87 
                 +el++ll+kg       l+D+R++e++e ghI  +  ++v     ++ +s+++  ++   +  +e + +  +++ + +v y++++ + +   +l+    
  KHJ35392.1 358 EELVKLLAKGTQSlnilLVDIRSREAFEIGHImsQSIICVepitLRREISGEELADSMVIAPDTEQAMYeRRNEFDLLVMYDQSSTKITDNDKLIHftt 456
                 67777776666447778***************855556669876555555555555555554444444489999*********9999444433222223 PP

   Rhodanese  88 ..k.lGy....kn.vsvldGGfkaw 104
                   + +G+    k+   +l  G+++w
  KHJ35392.1 457 avYdYGFekklKRpPLLLIAGLDGW 481
                 3323444322244455666666665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1020 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       586  (0.0326845); expected 358.6 (0.02)
Passed bias filter:                      453  (0.0252663); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.73u 0.25s 00:00:00.98 Elapsed: 00:00:00.43
# Mc/sec: 7086.34
//
Query:       KHJ35393.1  [L=499]
Description: putative aspartyl aminopeptidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   9.3e-173  575.0   0.0   1.1e-172  574.8   0.0    1.0  1  Peptidase_M18  Aminopeptidase I zinc metalloprotease (M18)
  ------ inclusion threshold ------
      0.033   14.0   0.1      0.062   13.1   0.1    1.4  1  Gar1           Gar1/Naf1 RNA binding region


Domain annotation for each model (and alignments):
>> Peptidase_M18  Aminopeptidase I zinc metalloprotease (M18)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  574.8   0.0  1.2e-176  1.1e-172       1     432 []      19     486 ..      19     486 .. 0.94

  Alignments for each domain:
  == domain 1  score: 574.8 bits;  conditional E-value: 1.2e-176
                    HHHH--SHHHHHHHHHHHHHCTT-EESTTTS-ST.STTCEEEEEEETTTEEEEEEEETTS-GGG--EEEEEE---SEEEEECCEEEEETTEEEEEE CS
  Peptidase_M18   1 finksptpyhvvaevaekllkagfkelsekekwk.iepggkyfvtrngssliAFavgkkykaengfsiigaHtDsptlrvKpkskkkaegylqvgv 95 
                    f+n+sptpyhvv+ + ++l+ agf+e++e+++w+ ++pg+ky++trngss++AFa+gkk+k++n+++i+gaHtDsp+lr+Kp+skk+ +g+lqvgv
     KHJ35393.1  19 FVNASPTPYHVVKSAIDRLTTAGFTEIHERDSWSgVKPGQKYYLTRNGSSIVAFAIGKKWKPGNPVAIVGAHTDSPCLRIKPISKKSGAGFLQVGV 114
                    9*********************************99************************************************************ PP

                    EEESS.SSGGGTT--EEEEEEEEECTT--EEEEEECCSTT---BBB----GGG-GG..GSS--TTTTTSEEEEEEEE.--.----TTCCC...... CS
  Peptidase_M18  96 etYGggiwetWldrdLsvaGrvlvkkkkeekleaklvnierPvlriPnlaiHLdrdineefkfneetelepilglae.ee.eeekedkek...... 183
                    etYGggiw+tW+drdLs+aGrv+ k+  +++ + kl++i++P+lriP+laiHLdr+   +f++n+etel pi+gl + e  + +k +++k      
     KHJ35393.1 115 ETYGGGIWHTWFDRDLSIAGRVICKDG-KGNYITKLIKIDKPILRIPTLAIHLDRS--PNFEPNKETELFPITGLVAaELnKTRKAENDKipqcvn 207
                    **************************9.699*************************..69***************985333445555555899999 PP

                    ...........T.CCHHHHHHHHHHHHTS-CCCCCCCEEEEEE-S--EEETTTT-EEEESSHHHHHHHHHHHHHHCCCCHT..-TTTS-SEEEEEE CS
  Peptidase_M18 184 ...........knkhkkalleliaeelgvevedivdlelilvdaqkakivGiekeflfaprlDnkvscfaaleallesaed..sleeedkvrival 266
                                ++h++ ++eliae  gv+ e+i+d+e+ l+d+qk+ ++Gi++e++f++rlDn+ ++++a+e+l+es  +   l++e ++r+ ++
     KHJ35393.1 208 enkpfqslkeiGERHHPCIVELIAEDSGVTAENILDFEMLLYDTQKSCVGGINNELIFSARLDNLGMTYCAIEGLIESVISpsALDDEFCIRLSIC 303
                    9988888765549*****************************************************************988878999********* PP

                    ESSCCGTS-STTSGGCTHHHHHHHHHHHHHCSTT-HCHHHH.......HC-EEEEE--EE---TTSGGGS-TTTS--TTSEEEEEEETTSSSTT-H CS
  Peptidase_M18 267 fDnEEvGStsaqGadsnfleevlerisialkkseafeeavl.......akSlliSaDvahaihPnysskheenhapllnkGvvikvnanqryatns 355
                    fD+EE+GStsa+Ga sn+l++vl+r+s+  +++e  ++++          S+liSaD+ah +hPny++k+e +h+p++nkG+vik+nanqryatns
     KHJ35393.1 304 FDHEEIGSTSAHGAASNLLPAVLRRLSVISSSHESDNSNIStayeqmlSTSFLISADMAHSVHPNYAHKYEAEHRPEINKGTVIKINANQRYATNS 399
                    **************************99887777444444335556669*********************************************** PP

                    HHHHHHHHHHHHHC..........-EEEEEEE-TTS----HCHHHHHHHHT-EEEEEE-EEBSTTSSSEEEECCHHHHHHHHHHHCC CS
  Peptidase_M18 356 agaallkevaqkan..........vklQelvvrndspcGstigpilaaktGirtiDlGaaqlsmHSireltgskdveeavklfkaFf 432
                     g++ll+eva+ a+          v+lQ +vvrndspcGstigp+l+a +G+rtiDlG++qlsmHSire+ g  dve+a+klf++Ff
     KHJ35393.1 400 PGIVLLREVANLAKpaeisstsqgVPLQLFVVRNDSPCGSTIGPMLSASLGMRTIDLGNPQLSMHSIRETGGVYDVEVATKLFESFF 486
                    ************99999999******************************************************************9 PP

>> Gar1  Gar1/Naf1 RNA binding region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.1   0.1   6.9e-06     0.062      15      64 ..     210     259 ..     197     263 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.1 bits;  conditional E-value: 6.9e-06
                 -TTS-EEEEEEEEEEETTEEEEEE---S--B--BTT-EEEETT--EEEE- CS
        Gar1  15 gppeevleiGtvssivenevviksttsgekkvldfnsilflenktqiGkV 64 
                 +p ++++eiG+ ++ +  e++ + +  +++++ldf+ +l++ +k+ +G +
  KHJ35393.1 210 KPFQSLKEIGERHHPCIVELIAEDSGVTAENILDFEMLLYDTQKSCVGGI 259
                 566789*****************9999999******************87 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (499 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       375  (0.0209158); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3588.88
//
Query:       KHJ35394.1  [L=319]
Description: hypothetical protein EV44_g5523 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (319 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       365  (0.0203581); expected 358.6 (0.02)
Passed bias filter:                      346  (0.0192983); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.44u 0.23s 00:00:00.67 Elapsed: 00:00:00.38
# Mc/sec: 2526.85
//
Query:       KHJ35395.1  [L=817]
Description: putative vhs domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-39  134.9   1.2    2.6e-38  131.0   0.1    2.5  2  VHS             VHS domain
    9.9e-16   57.6   3.3      2e-15   56.6   3.3    1.5  1  FYVE            FYVE zinc finger
    4.2e-06   27.0   0.5    2.3e-05   24.6   0.1    2.4  2  GAT             GAT domain
    5.9e-06   25.8   8.3     0.0083   16.0   0.3    2.7  2  UIM             Ubiquitin interaction motif
  ------ inclusion threshold ------
       0.38   10.7   1.9       0.84    9.6   1.9    1.6  1  OrfB_Zn_ribbon  Putative transposase DNA-binding domain


Domain annotation for each model (and alignments):
>> VHS  VHS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.0   0.1   7.4e-42   2.6e-38       3     141 .]       8     144 ..       7     144 .. 0.94
   2 ?    2.0   0.1     0.047   1.7e+02      72      87 ..     189     204 ..     178     207 .. 0.90

  Alignments for each domain:
  == domain 1  score: 131.0 bits;  conditional E-value: 7.4e-42
                 HHHHHHHHHHHHT-TT-SS--HHHHHHHHHHHHCSTCHHHHHHHHHHHHHT-SSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHHCTTTC CS
         VHS   3 sasslekliekATdeslreedlslileicDlinekeagpkeavrlikkkinsknphvallaLklldalvkNcGskfhleiaskeflnelvklilekkns 101
                 s+s+l+++i+kAT++sl  ed++l+lei+D+i++k +g kea+r++kk++++knp+ +l +Lkl+d++vkN+Gs+f+ eias ef+++lv+l+  +   
  KHJ35395.1   8 SSSQLDEQIDKATSSSL--EDIALNLEISDIIRSKTVGSKEAMRALKKRLENKNPNIQLGTLKLTDTCVKNGGSHFLTEIASPEFMDNLVSLLNAQGGT 104
                 4678***********99..688*********************************************************************99998877 PP

                 HCS..HHHHHHHHHHHHHHHTTT-TTGHHHHHHHHHHHHTT CS
         VHS 102 klak.vkkkvlelleeWadafknkpelkkisdvykllkrkg 141
                   +  vk+k+lel+++Wa a  +  e+++i+d+y++l r+g
  KHJ35395.1 105 TINYdVKMKILELIQSWAIAT-DGHEFRYIKDTYENLLRDG 144
                 76657**************99.899***********98765 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.047
                 HHSHHHHHHHHTSHHH CS
         VHS  72 kNcGskfhleiaskef 87 
                 +NcG+ f ++++sk +
  KHJ35395.1 189 RNCGNVFDHQCSSKTL 204
                 8************976 PP

>> FYVE  FYVE zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.6   3.3   5.7e-19     2e-15       8      66 ..     168     225 ..     164     227 .. 0.91

  Alignments for each domain:
  == domain 1  score: 56.6 bits;  conditional E-value: 5.7e-19
                 --SB-TTT--B--SSS--EE-TTT--EE-STTS-EEE.EEGGGTEEEEEEE-HHHHHHH CS
        FYVE   8 evkkCeiCakkFsllrrrhhCrlCGkvvCekCssklvallekeaeeksvrvCkeClael 66 
                 +++ C+ C+++F++++r+hhCr+CG+v+ ++Cssk+++l+ +   +++vrv + C+ +l
  KHJ35395.1 168 DSDVCMRCRAAFTFTNRKHHCRNCGNVFDHQCSSKTLTLP-HLGITQPVRVDDGCYFKL 225
                 4689*********************************777.99************9876 PP

>> GAT  GAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.64   2.3e+03      19      41 ..      41      63 ..      29      71 .. 0.85
   2 !   24.6   0.1   6.3e-09   2.3e-05       3      76 ..     375     447 ..     373     448 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.64
         GAT 19 ellenellkeLyetckamqpriq 41
                ++ ++e++  L +++++  p+iq
  KHJ35395.1 41 TVGSKEAMRALKKRLENKNPNIQ 63
                56789************999998 PP

  == domain 2  score: 24.6 bits;  conditional E-value: 6.3e-09
         GAT   3 naklLsemLsste...pdeellenellkeLyetckamqpriqklieetadeedllaelLqlNDeLnnvlerYerlkk 76 
                 n++l+s +++ ++   p   +l++  ++eLye++ +++p++ +  +et  ++d    lL l+ +L++v++ Y+rl++
  KHJ35395.1 375 NINLFSNLVDRLQtqpP-GAVLKEPQIQELYENISKLRPKLARTYGETMSKHD---SLLDLHAKLSSVVRYYDRLLE 447
                 88888888888853324.599**************************988886...9*****************987 PP

>> UIM  Ubiquitin interaction motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.3   2.3e-06    0.0083       3      16 ..     267     280 ..     267     280 .. 0.98
   2 !   12.2   2.8   3.6e-05      0.13       1      14 [.     317     330 ..     317     332 .. 0.96

  Alignments for each domain:
  == domain 1  score: 16.0 bits;  conditional E-value: 2.3e-06
         UIM   3 dedLqrAlalSlqE 16 
                 ded+++Ala+Sl+E
  KHJ35395.1 267 DEDFKKALAMSLEE 280
                 9************9 PP

  == domain 2  score: 12.2 bits;  conditional E-value: 3.6e-05
         UIM   1 dEdedLqrAlalSl 14 
                 +EdedL++A++ Sl
  KHJ35395.1 317 EEDEDLKAAIEASL 330
                 7************8 PP

>> OrfB_Zn_ribbon  Putative transposase DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.6   1.9   0.00023      0.84      19      57 ..     159     196 ..     153     201 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00023
  OrfB_Zn_ribbon  19 veevnpay.TSktCseCgsknkealsgrtfkCpnCgfead 57 
                     + ++ p++  S  C +C +  +   ++r+++C+nCg ++d
      KHJ35395.1 159 ISYAPPEWtDSDVCMRCRAAFTF--TNRKHHCRNCGNVFD 196
                     66777777469********9999..************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (817 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1885  (0.105137); expected 358.6 (0.02)
Passed bias filter:                      583  (0.0325172); expected 358.6 (0.02)
Passed Vit filter:                        88  (0.00490825); expected 17.9 (0.001)
Passed Fwd filter:                        12  (0.000669307); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.79u 0.30s 00:00:01.09 Elapsed: 00:00:00.43
# Mc/sec: 5668.06
//
Query:       KHJ35396.1  [L=470]
Description: hypothetical protein EV44_g1005 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (470 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       369  (0.0205812); expected 358.6 (0.02)
Passed bias filter:                      314  (0.0175135); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.40
# Mc/sec: 3488.36
//
Query:       KHJ35397.1  [L=525]
Description: putative pak-box p21-rho-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.11   12.5   2.3         13    5.7   0.3    2.7  2  DUF5356   Family of unknown function (DUF5356)


Domain annotation for each model (and alignments):
>> DUF5356  Family of unknown function (DUF5356)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   0.3   0.00074        13      42      62 ..     319     339 ..     271     349 .. 0.75
   2 ?    5.6   0.1   0.00082        15      33      48 ..     440     455 ..     429     462 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.00074
     DUF5356  42 qecseaEWdaadeaysaelLN 62 
                 ++c+ +EWd ++++ ++   N
  KHJ35397.1 319 KSCTRSEWDSSSPPRGSKVSN 339
                 78************9987665 PP

  == domain 2  score: 5.6 bits;  conditional E-value: 0.00082
     DUF5356  33 esssiGesLqecseaE 48 
                 ++ssiGesL+ cs+ E
  KHJ35397.1 440 RNSSIGESLSICSDME 455
                 5799**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (525 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       578  (0.0322383); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.21s 00:00:00.74 Elapsed: 00:00:00.39
# Mc/sec: 4022.01
//
Query:       KHJ35398.1  [L=673]
Description: putative glucose-regulated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.2e-264  878.2  14.2   2.5e-264  878.1  14.2    1.0  1  HSP70           Hsp70 protein
      4e-19   68.6   1.5    1.4e-17   63.6   0.4    2.2  2  MreB_Mbl        MreB/Mbl protein
     0.0024   18.2   4.3        3.1    8.3   0.2    3.7  3  FtsA            Cell division protein FtsA
  ------ inclusion threshold ------
       0.01   15.1   0.9       0.12   11.6   0.1    2.5  3  Hydantoinase_A  Hydantoinase/oxoprolinase


Domain annotation for each model (and alignments):
>> HSP70  Hsp70 protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  878.1  14.2  5.5e-268  2.5e-264       1     598 [.      48     652 ..      48     653 .. 0.99

  Alignments for each domain:
  == domain 1  score: 878.1 bits;  conditional E-value: 5.5e-268
                 EEEEEEXSSEEEEEEEETTEEEEEXXTTSXSSEESEEEEXTTSEEETHHHHHCTTTTGGGEEEXGGGTTTXBTTSHHHHHHHTTXSSEEEEETTSBEEE CS
       HSP70   1 viGiDLGttnsvvavmeggkievianeegnrttPsvvaFtkkerlvGeaAkrqavtnpkntvfsvKrliGrkfsdpevqkeikelpykvvkkengkavv 99 
                 viGiDLGtt+s+v+vm++gk+e+++n++gnr+tPs+vaFt++erlvG+aAk+qa++npk+t+f++KrliGrkf+d+++q+++k++p++vv+k +gk+ v
  KHJ35398.1  48 VIGIDLGTTYSCVGVMQKGKVEILVNDQGNRITPSYVAFTDDERLVGDAAKNQAASNPKRTIFDIKRLIGRKFEDKDAQADMKHFPFDVVQK-DGKPNV 145
                 79*****************************************************************************************9.999999 PP

                 EEEETTE..EEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEEXTTXXHHHHHHHHHHHHHTTXEEEEEEEHHHHHHHHHHTCCSSSCEEEEEEEEXSS CS
       HSP70 100 eveaage..kftpeqisamvLkklketaeaylgkkvtdavitvPaYfndaqRqatkdAgkiAGLnvlRivNepTAaalaYGldkkdkernvlvyDlGgg 196
                 +ve+ g   +ftpe+isam+L k+k+ ae+ylg kvt+av+tvPaYfnd+qRqatkdAg+iAGLnvlRivNepTAaa+aYGldk+d er+++vyDlGgg
  KHJ35398.1 146 KVEVSGSfkTFTPEEISAMILGKMKDVAESYLGSKVTHAVVTVPAYFNDNQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKTDGERQIIVYDLGGG 244
                 999999888****************************************************************************************** PP

                 XEEEEEEEEETTEEEEEEEEEETTXSHHHHHHHHHHHHHHHHHHHHSXXGGGSHHHHHHHHHHHHHHHHHTTTSSCSEEEEEEEEEETTTEEEEEEEEH CS
       HSP70 197 tfdvSilelekGvfevkaTagDthlGGedfDealvehlveefkkkegidlskdkkalqrlkeaaekaKkeLSsskqteinleietvdedgkdlseklsR 295
                 tfdvS+l++++Gvfev++TagDthlGGedfD++++++l+++++k++++d++kd k + +lk++aekaK++LSs  q+++++eie++++ gkd+se+l+R
  KHJ35398.1 245 TFDVSLLSIDRGVFEVLSTAGDTHLGGEDFDQRIINYLAKKYNKENNVDITKDLKTMGKLKREAEKAKRTLSS--QKTTRIEIEAFHN-GKDFSETLTR 340
                 *************************************************************************..8899999*****9.********** PP

                 HHHHHHHHHHHHHTHHHHHHHHHHCTEEGGGCSEEEEESGGGGSHHHHHHHHHHTT.CHHBSSSHTTTHHHHHHHHHHHHHCTCGCSHCCEEEEBESS- CS
       HSP70 296 akfeelvedllertlepvekalkdaklkkeeidevvlvGGstRiPkvqelvkelfg.kepsktvnpDeavaiGAAvqagvlsgeeevkdllllDvtpLs 393
                 akfeel+ dl+++tl+pve++lkdak+kk+e+d++vlvGGstRiPkv el++e+fg k++sk++npDeava GAAvq+gvlsgee ++dl+l+Dv+pL+
  KHJ35398.1 341 AKFEELNIDLFRKTLKPVEQVLKDAKVKKSEVDDIVLVGGSTRIPKVVELIEEFFGgKKASKGINPDEAVAFGAAVQGGVLSGEEGTEDLVLMDVNPLT 439
                 ********************************************************9****************************************** PP

                 EEEEETTTEEEEEESTTCBSSEEEEEEEEESSTTSSSEEEEEEESSSSBGGGSEEEEEEEEECESSCSTTCSEEEEEEEEETTSCEEEEEEETTTCCEE CS
       HSP70 394 lgietlggvmtkliernttiptkksqvfstaadnqtaveievlqgerelvkdnkllgsfeldgippaprGvpqieVtfdidanGiltvsakdketgkee 492
                 lgiet+ggvmtkli+rnt+ipt+ksq+fsta dnq+ v i+v++ger+l+kdn++lg+fel+gippaprGvpqieV+f++danGil+vsa dk+tgk+e
  KHJ35398.1 440 LGIETTGGVMTKLIPRNTVIPTRKSQIFSTAVDNQPVVLIQVYEGERTLTKDNNQLGKFELTGIPPAPRGVPQIEVSFELDANGILKVSASDKGTGKSE 538
                 *************************************************************************************************** PP

                 EEEEECCSS.SBHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...GGGSTHHHH....HHHHHHHHHHHCHTTSSCHHHHHHHH CS
       HSP70 493 eitieaseg.lseeeiekmvkdaeesaeedkkkkeaieakneaeelvyslekkleee...aekvseaek....ekvesaieeLkeeleeeekeeieakt 583
                 +iti++++g l+++ei++mv++ae++a+edk++ke+i+a+n +e++v sl++++++e   + k++e++k    e++++++++L+++++e+ +e++e+++
  KHJ35398.1 539 SITITNDKGrLTQDEIDRMVQEAEKYADEDKANKERIDARNALENYVFSLKNQVNDEkglGAKIEESDKetilEAIKETTSWLDKNGSEATTEDFEEQK 637
                 *********9*********************************************99899899999999999999************************ PP

                 HHHHHHHHHHHHHHH CS
       HSP70 584 eelkkvvekiaekly 598
                 e+l++v+++i++kly
  KHJ35398.1 638 EKLSSVAYPITSKLY 652
                 ***********9987 PP

>> MreB_Mbl  MreB/Mbl protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    3.9   0.0    0.0044        20       3      23 ..      48      68 ..      46     129 .. 0.74
   2 !   63.6   0.4     3e-21   1.4e-17      77     316 ..     164     415 ..     156     420 .. 0.81

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.0044
                EEEEEE-SSEEEEEETTTEEE CS
    MreB_Mbl  3 dlgiDLGtantlvyvkgkgiv 23
                 +giDLGt+   v v +kg v
  KHJ35398.1 48 VIGIDLGTTYSCVGVMQKGKV 68
                59********99987777754 PP

  == domain 2  score: 63.6 bits;  conditional E-value: 3e-21
                 HHHHHHHHHHTSS-S.S--EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT--TTSSS-EEEE.EE-SS-EEEEEEETTEEE..... CS
    MreB_Mbl  77 llkyfikkvkkkksl.skprvvicvPsgiteverrAvkeaakkaGarevllieeplaAAiGaglpveepsgnmvv.diGggttevavislggiv..... 168
                 ++   +k+v+++    + ++ v++vP   ++ +r+A k+a + aG +   +++ep aAAi  gl+ ++ + +++v d+Gggt +v+++s+   v     
  KHJ35398.1 164 MILGKMKDVAESYLGsKVTHAVVTVPAYFNDNQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKTDGERQIIVyDLGGGTFDVSLLSIDRGVfevls 262
                 5555555555544432557899*******************************************99999887766*************9754312111 PP

                 EEEEES-SHHHHHHHHHHHHHHHHS....EE--H..HHHHHHHHHH-BSS--HHHH.EEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH CS
    MreB_Mbl 169 tsksvrvaGdeldeaiikyirkkyn....lliGe..rtaekikieigsavkeeeee.kmeikGrdlvtglpkevevsseevrealkepvsaiveavkev 260
                 t+   +++G+++d+ ii+y+ kkyn    + i +  +t  k+k e  +a+ + +++ +++i+     +g   + +++ ++ +e   + +++ ++ v++v
  KHJ35398.1 263 TAGDTHLGGEDFDQRIINYLAKKYNkennVDITKdlKTMGKLKREAEKAKRTLSSQkTTRIEIEAFHNGKDFSETLTRAKFEELNIDLFRKTLKPVEQV 361
                 4456899****************9733335565433688888999988887766655899999999********************************* PP

                 HHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHHSS.-EEE-SSTTTHHHHHHH CS
    MreB_Mbl 261 LektppeLaadivdrgivltGGgallkgldkllseetgl.pvkvaedpltcvakGtg 316
                 L++++   + ++    ivl+GG++ +  + +l++e +g  + + + +p ++va G++
  KHJ35398.1 362 LKDAKVKKS-EV--DDIVLVGGSTRIPKVVELIEEFFGGkKASKGINPDEAVAFGAA 415
                 **9887643.33..4699****************99975156677788888888875 PP

>> FtsA  Cell division protein FtsA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.9   0.0    0.0037        17       1      25 [.      49      70 ..      49     192 .. 0.86
   2 !    8.3   0.2   0.00069       3.1       4      87 ..     240     401 ..     237     415 .. 0.59
   3 ?    3.5   0.2     0.021        95      29      71 ..     538     577 ..     522     645 .. 0.71

  Alignments for each domain:
  == domain 1  score: 5.9 bits;  conditional E-value: 0.0037
                EEEEE-SSSEEEEEEETTEEEEEEE CS
                xxxxxxxxxxxxxxxxxxxxxxxxx RF
        FtsA  1 alvDiGagktdvavaedgalvhlrv 25
                +++D+G++ ++v v+++g+   +++
  KHJ35398.1 49 IGIDLGTTYSCVGVMQKGK---VEI 70
                58***************95...444 PP

  == domain 2  score: 8.3 bits;  conditional E-value: 0.00069
                 EE-SSSEEEEEEETTEEEE.................EEEES-........-HHHHHHHHHHHHT--HHHHHHHHHHH--S--....EEEEEHHHHH... CS
                 xxxxxxxxxxxxxxxxxxx.................xxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxx... RF
        FtsA   4 DiGagktdvavaedgalvh.................lrvigv........ggngitkdiakalrtaveeAerikikyGsala....ekeigrkels... 70 
                 D+G+g+ dv++++ ++ v+                  r+i++        +   itkd++  +++   eAe+ k++  s+               +   
  KHJ35398.1 240 DLGGGTFDVSLLSIDRGVFevlstagdthlggedfdQRIINYlakkynkeNNVDITKDLK-TMGKLKREAEKAKRTLSSQKTtrieI--------Eafh 329
                 677777777777765433334333334444444444444444444444444455666665.44555677888884444433344440........3555 PP

                 ..................................................GGGGSTTHHHHHHHHH.....T CS
                 ..................................................xxxxxxxxxxxxxxxx.....x RF
        FtsA  71 ..................................................ggsalpnleelaeral.....s 87 
                                                                   g++ +p+++el+e+ +     s
  KHJ35398.1 330 ngkdfsetltrakfeelnidlfrktlkpveqvlkdakvkksevddivlvgGSTRIPKVVELIEEFFggkkaS 401
                 55555556666666677777778888888888888888888888********************98544330 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.021
                 -HHHHHHH....HHHHHT--HHHHHHHHHHH--S--EEEEEHHHHHG CS
                 xxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        FtsA  29 ggngitkd....iakalrtaveeAerikikyGsalaekeigrkelsg 71 
                 ++  it+d    ++  +   v+eAe+ +        e + ++++++ 
  KHJ35398.1 538 ESITITNDkgrlTQDEIDRMVQEAEKYA-------DEDKANKERIDA 577
                 57789999999999999********999.......223334444443 PP

>> Hydantoinase_A  Hydantoinase/oxoprolinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.9   0.0     0.049   2.2e+02      74     105 ..      41      72 ..      27      82 .. 0.80
   2 ?   11.6   0.1   2.8e-05      0.12      58      97 ..     214     252 ..     200     269 .. 0.78
   3 ?   -2.5   0.0      0.53   2.4e+03     226     252 ..     355     381 ..     298     416 .. 0.69

  Alignments for each domain:
  == domain 1  score: 0.9 bits;  conditional E-value: 0.049
  Hydantoinase_A  74 klagekkvItfDmGGTstDvslikdgevevsl 105
                      ++ +  vI++D+G T   v ++++g+ve+  
      KHJ35398.1  41 LQESYGTVIGIDLGTTYSCVGVMQKGKVEILV 72 
                     4677888********************99865 PP

  == domain 2  score: 11.6 bits;  conditional E-value: 2.8e-05
  Hydantoinase_A  58 ilSGPaaGvvgaaatsklagekkvItfDmGGTstDvslik 97 
                     i+  P a ++++    k++ge+++I++D+GG ++Dvsl++
      KHJ35398.1 214 IVNEPTAAAIAYGL-DKTDGERQIIVYDLGGGTFDVSLLS 252
                     55567777777666.89*******************9864 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 0.53
  Hydantoinase_A 226 anavrklsvergldpkeltlvvfGGaG 252
                      ++v++++++ +++++e+  +v  G++
      KHJ35398.1 355 LKPVEQVLKDAKVKKSEVDDIVLVGGS 381
                     456777777777777777665555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (673 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1318  (0.0735122); expected 358.6 (0.02)
Passed bias filter:                      706  (0.0393775); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.75u 0.26s 00:00:01.01 Elapsed: 00:00:00.44
# Mc/sec: 4619.25
//
Query:       KHJ35399.1  [L=523]
Description: putative 2-c-methyl-d-erythritol -cyclodiphosphate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      6e-11   42.9   0.0    1.6e-10   41.5   0.0    1.8  1  Methyltransf_25  Methyltransferase domain
    3.4e-07   30.8   0.0    8.3e-07   29.6   0.0    1.7  1  Methyltransf_11  Methyltransferase domain
    6.5e-07   29.3   0.2    1.4e-06   28.2   0.0    1.6  2  Methyltransf_31  Methyltransferase domain
    1.7e-05   24.8   0.0    3.6e-05   23.7   0.0    1.6  1  Methyltransf_23  Methyltransferase domain
    3.6e-05   24.4   0.0    0.00022   21.9   0.0    2.3  2  Methyltransf_12  Methyltransferase domain
  ------ inclusion threshold ------
      0.019   14.9   0.0      0.047   13.7   0.0    1.6  1  Methyltransf_32  Methyltransferase domain
      0.024   14.2   0.0       0.04   13.5   0.0    1.3  1  MTS              Methyltransferase small domain
       0.15   12.1   0.1       0.69    9.9   0.0    2.0  2  ATP-grasp_3      ATP-grasp domain


Domain annotation for each model (and alignments):
>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.0   7.2e-14   1.6e-10       1      93 [.     304     393 ..     304     396 .. 0.90

  Alignments for each domain:
  == domain 1  score: 41.5 bits;  conditional E-value: 7.2e-14
                      EEEET-TTSHHHHHHHCTST.SSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHHE CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlg.kakvtgvDiseemleaareraeeeglnvefvqgdaedlpfedgsfDlvvssgalhhlsdedlekalkeiarvL 93 
                      vLd++cGtG + + l+++ g ka++tg+++s +ml+  + ++   ++++ +++g +++l   ++++D +v++g+lh+l++ +  ++l++i+ + 
       KHJ35399.1 304 VLDMACGTGYFGELLHQN-GiKAEITGIELSTGMLNFPAIKN---HYRCPVMVGPMQELIMVANEYDHIVCFGGLHFLDRIHFNAVLARIFMLA 393
                      9***************99.558*************9966555...379***********************988*****999999999998765 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.6   0.0   3.7e-10   8.3e-07       1      76 [.     305     379 ..     305     395 .. 0.83

  Alignments for each domain:
  == domain 1  score: 29.6 bits;  conditional E-value: 3.7e-10
                      EEET-TTSHHHHHHHHTT..SEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCCTSS-TT-EEEEEEES-CCC-CC CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg..arvvgvDlskemlklakekaseeglkvefvvadaeklpfednsfDlvvssevlhhved 76 
                      Ld++cGtG++ e l+++g  a+++g++ls+ ml+    k++    ++ ++v+ +++l +  n +D +v++  lh++++
       KHJ35399.1 305 LDMACGTGYFGELLHQNGikAEITGIELSTGMLNFPAIKNHY---RCPVMVGPMQELIMVANEYDHIVCFGGLHFLDR 379
                      89*******************************666444443...3677**************************952 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0       3.4   7.6e+03     101     128 ..      75     101 ..      73     116 .. 0.72
   2 !   28.2   0.0   6.4e-10   1.4e-06       6     113 ..     303     405 ..     301     453 .. 0.82

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 3.4
  Methyltransf_31 101 lkpggilliedprllaelpakveeeska 128
                      l++++++++++   +++++  ++e+++ 
       KHJ35399.1  75 LNTNSAVCVNEEE-MKKQISLMREKNNH 101
                      6777888888888.88888888887773 PP

  == domain 2  score: 28.2 bits;  conditional E-value: 6.4e-10
  Methyltransf_31   6 rvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgldnveFeqgdieeleklledekfDlilsnevl..naladpdkileei 97 
                      +vlD +CGtG+++  l+ + g kae++Gi+ s  ++++      k+ + ++ + +g+++el + ++ + +D i++++ l   +  + +++l +i
       KHJ35399.1 303 TVLDMACGTGYFGELLH-QNGIKAEITGIELSTGMLNFPAI---KNHY-RCPVMVGPMQELIM-VA-NEYDHIVCFGGLhfLDRIHFNAVLARI 389
                      79***************.66889***************999...6778.6**********776.56.99*******999776677778888888 PP

  Methyltransf_31  98 ervlkpggilliedpr 113
                      + + ++   + i+d +
       KHJ35399.1 390 FMLARKSITFEIDDLN 405
                      8888877777777776 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.7   0.0   1.6e-08   3.6e-05      23     123 ..     301     407 ..     271     457 .. 0.76

  Alignments for each domain:
  == domain 1  score: 23.7 bits;  conditional E-value: 1.6e-08
  Methyltransf_23  23 ggrvLdiGcGtGillevlrengf..svtgvDlspeaveiaekakkaqkdqfdeqeaae..........pqgkfdlIvlrevlehvp..dppell 102
                      +g vLd++cGtG++ e+l +ng   ++tg++ls  + +    a+k++  +       +           ++ +d Iv++ +l+ ++  ++ ++l
       KHJ35399.1 301 SGTVLDMACGTGYFGELLHQNGIkaEITGIELSTGMLNFP--AIKNHYRCP------VmvgpmqelimVANEYDHIVCFGGLHFLDriHFNAVL 386
                      689******************98889*******8766632..222222222......1233332333355599*****9999999966688999 PP

  Methyltransf_23 103 rqiatllkpgGylllseplas 123
                      ++i+ l +    +++ + + s
       KHJ35399.1 387 ARIFMLARKSITFEIDDLNDS 407
                      999988887777777777665 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.9   0.0   9.6e-08   0.00022       1      90 [.     305     390 ..     305     396 .. 0.75
   2 ?   -0.5   0.0      0.93   2.1e+03      25      57 ..     401     433 ..     384     463 .. 0.70

  Alignments for each domain:
  == domain 1  score: 21.9 bits;  conditional E-value: 9.6e-08
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhlkdir..evldnir 90 
                      L+  cGtG + + l ++ + +e+tg+++s+ ++      + +++n+    v +   + l     + +D +v+++ lh l+ i+  +vl++i 
       KHJ35399.1 305 LDMACGTGYFGELLHQNGIKAEITGIELSTGML-----NFPAIKNHYRCPVMVGPMQELIMVA-NEYDHIVCFGGLHFLDRIHfnAVLARIF 390
                      899******************************.....6666665444444444444333333.59*************7766436666665 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.93
  Methyltransf_12  25 gvDispsaiedakeklakrennnnnnveleald 57 
                        D++ s i+++k k  + + n nn++  ea +
       KHJ35399.1 401 IDDLNDSYIARTKGKYGELCYNGNNVNAAEAFS 433
                      558899999999999999998888877776655 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.1e-05     0.047      27      61 ..     302     334 ..     287     339 .. 0.88

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.1e-05
  Methyltransf_32  27 ltvvDvGaGkgYLsfvlalkekeyklkvvgidake 61 
                       tv+D+++G gY +  l++  +  k +++gi++++
       KHJ35399.1 302 GTVLDMACGTGYFGELLHQ--NGIKAEITGIELST 334
                      589****************..5599*******976 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.5   0.0   1.8e-05      0.04      27      69 ..     298     338 ..     290     395 .. 0.77

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.8e-05
                 CHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHH CS
         MTS  27 lpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAle 69 
                 ++  +sg+vlD++cG+G+ g  l ++  +ae+t ++ ++  l+
  KHJ35399.1 298 FE--FSGTVLDMACGTGYFGELLHQNGIKAEITGIELSTGMLN 338
                 43..5899************************99998876554 PP

>> ATP-grasp_3  ATP-grasp domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.0   0.00031      0.69      54      89 ..      89     129 ..      63     143 .. 0.73
   2 ?   -1.7   0.0       1.1   2.5e+03      92     113 ..     405     429 ..     395     446 .. 0.81

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00031
                  -TTE............EEEE---SEEEEEEEEE.SSSEEEE CS
  ATP-grasp_3  54 eeaeaaieeve.....lvqefieGkplSvsllsdgekvlvl 89 
                  +++ + + e++     lvq++i G+ +Sv ++  g  v+ l
   KHJ35399.1  89 KKQISLMREKNnhlkiLVQDYIIGNACSVIVIEMGRGVVAL 129
                  3333333333367888****************999888777 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.1
                  EEEEEET.......TEEEEEEES-- CS
  ATP-grasp_3  92 nrqliekaeke...fvyaGnvtpie 113
                  n+ +i +++ +   ++y+Gn +++ 
   KHJ35399.1 405 NDSYIARTKGKygeLCYNGNNVNAA 429
                  777777665557889*****99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (523 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       518  (0.0288917); expected 358.6 (0.02)
Passed bias filter:                      476  (0.0265492); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3775.14
//
Query:       KHJ35400.1  [L=228]
Description: hypothetical protein EV44_g0235 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1899  (0.105918); expected 358.6 (0.02)
Passed bias filter:                      232  (0.0129399); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                        14  (0.000780858); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 1659.91
//
Query:       KHJ35401.1  [L=467]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    5.9e-08   32.6   0.0    1.2e-07   31.6   0.0    1.5  1  Exo_endo_phos_2  Endonuclease-reverse transcriptase


Domain annotation for each model (and alignments):
>> Exo_endo_phos_2  Endonuclease-reverse transcriptase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.6   0.0   6.7e-12   1.2e-07       2     102 ..     356     446 ..     355     456 .. 0.85

  Alignments for each domain:
  == domain 1  score: 31.6 bits;  conditional E-value: 6.7e-12
  Exo_endo_phos_2   2 liisvYippsdelenlestlekllselkspkiiilGDfNakhplWgsedtdssargeeLiefleehslsllnllksgptfkssngsstiDltlt 95 
                       +++vY  p+d      s+++++ls +++pk i +GDfN    +W+ + ++   +gee++++ ee++l++l   +  pt++     +t+Dl +t
       KHJ35401.1 356 MFLNVYKAPHD-----PSAVQHILSWTPTPKSIAIGDFNPVYWAWQPSANSYYGQGEEIERLAEENNLTCLIVGE--PTHRA---GNTLDLAFT 439
                      58899999999.....8888888888888899**************977777*****************666644..88855...578****** PP

  Exo_endo_phos_2  96 sdnlals 102
                      + + +  
       KHJ35401.1 440 NVSDTMA 446
                      9887665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       572  (0.0319036); expected 358.6 (0.02)
Passed bias filter:                      321  (0.017904); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.36
# Mc/sec: 3908.36
//
Query:       KHJ35402.1  [L=207]
Description: hypothetical protein EV44_g3993 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (207 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       628  (0.0350271); expected 358.6 (0.02)
Passed bias filter:                      456  (0.0254337); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.22s 00:00:00.61 Elapsed: 00:00:00.35
# Mc/sec: 1772.30
//
Query:       KHJ35403.1  [L=644]
Description: putative p-loop containing nucleoside triphosphate hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    0.00038   20.6   0.1     0.0017   18.5   0.1    2.0  1  DUF87         Helicase HerA, central domain
  ------ inclusion threshold ------
      0.022   14.1   0.0      0.039   13.3   0.0    1.3  1  FtsK_SpoIIIE  FtsK/SpoIIIE family
      0.042   14.1   0.0        1.3    9.3   0.0    2.5  2  AAA_22        AAA domain
      0.058   12.7   0.0       0.13   11.5   0.0    1.6  1  Zeta_toxin    Zeta toxin
       0.12   12.8   0.1       0.78   10.1   0.0    2.4  2  AAA_16        AAA ATPase domain


Domain annotation for each model (and alignments):
>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.1   4.7e-07    0.0017      28     209 ..     233     445 ..     229     452 .. 0.76

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 4.7e-07
       DUF87  28 ilgsTGsGKSntvavLleelle.......kkgatililDpHGEYgkal.............................ekllsekvkvitpspsakdkel 90 
                 i gs GsGKS+t + Lle+ l        k+ +  l+l +  E+ + +                              k++  +++v         ++l
  KHJ35403.1 233 ICGSQGSGKSHTLSCLLENCLMcsdlselKNPLAALVL-HYDEFTSDSkgtpceaaylssipdikvrilcspanletIKRTYANLNV-------TIEPL 323
                 78999**************99999***99888899999.778999999788888777777777776666666655543333333333.......4458* PP

       DUF87  91 kinpwsldpeelldllee.ddkpaaav.qrsvleealdqakakeekeklssdepveklleelkkekeelrklknqaiarlldkledllrkggsf..... 182
                 +in  +l+ + +ldl+ + + ++         ++++l++++   e++k +++   + ++ ++     +l+ ++    ++ ld+le+++ k +++     
  KHJ35403.1 324 HINQTDLNTKRMLDLMAVsT-EDGPMPlYLHSINRILRELR--LEQQKKQTQFNYNDFKRKVT--GIGLSLAQIAPLNQRLDTLESFMPKSQTIqnawd 417
                 ******************53.44434437777888888888..55555555555555555555..3456777777778888888888888888888888 PP

       DUF87 183 .snsstdliallleklekegkitiidls 209
                     s+++ +   e+l k+g +ti+dls
  KHJ35403.1 418 mRIPSSKPQERGNEWLIKGGTLTIVDLS 445
                 7788999999999**************8 PP

>> FtsK_SpoIIIE  FtsK/SpoIIIE family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   1.1e-05     0.039      27      65 ..     216     254 ..     207     262 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 1.1e-05
                   TS-EEEEEGGGS-.SEEEE--TTSSHHHHHHHHHHHHHT CS
  FtsK_SpoIIIE  27 sgnplvldlkkmashllvaGatgsGKStalntLilSlat 65 
                    ++p  ++ ++++s   ++G++gsGKS +l  L+ + ++
    KHJ35403.1 216 LDDPRLFFNISSPSSAFICGSQGSGKSHTLSCLLENCLM 254
                   578888999999999***************999987776 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.3   0.0   0.00035       1.3       5      27 ..     228     250 ..     224     274 .. 0.90
   2 ?    1.8   0.0     0.074   2.7e+02      77     112 ..     456     494 ..     437     518 .. 0.63

  Alignments for each domain:
  == domain 1  score: 9.3 bits;  conditional E-value: 0.00035
      AAA_22   5 agilvvtGesGtGKTtllrrlle 27 
                  ++ +++G  G+GK+++l  lle
  KHJ35403.1 228 PSSAFICGSQGSGKSHTLSCLLE 250
                 67899************999887 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.074
      AAA_22  77 ellealeqalrarav..ielliiDEaqh.lrseealeeL 112
                 +l++++   + ++++   +++ +DEa++ ++s +  ++L
  KHJ35403.1 456 ALFNMCVGLFLEQKTniGRIVALDEAHKyMNSTAEASTL 494
                 5566666666666666667999******67643322222 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.7e-05      0.13      11      38 ..     223     250 ..     212     256 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.7e-05
  Zeta_toxin  11 psqerPklillgGqpGAGKselaellkd 38 
                  + ++P + ++ G++G+GKs++++ l +
  KHJ35403.1 223 FNISSPSSAFICGSQGSGKSHTLSCLLE 250
                 45579*****************998765 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.42   1.5e+03      64     127 ..      66     164 ..      46     173 .. 0.72
   2 ?   10.1   0.0   0.00022      0.78      22      47 ..     226     251 ..     220     484 .. 0.83

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.42
      AAA_16  64 esaipysa.laqalareellrqlldeaesaeleawrekleeala..................................avpelagaeasrllellkrll 127
                 +s++p s+ + + l+ ++ l  + + ++s++l++++++ +++ +                                  + ++l+ +e++rl+++   ll
  KHJ35403.1  66 PSSTPNSQlFSEFLTPRSNLDRVFSSLSSNNLDQAATETRKEEGktknseeekflfvnrfsssvkmsagppisrfaiqPKKNLELSEEERLFQAHLGLL 164
                 666777777888888888888888888888888888877777777777777778888888888888877877777777777777777788887766666 PP

  == domain 2  score: 10.1 bits;  conditional E-value: 0.00022
      AAA_16  22 grpelvllsGesGvGKsslvrellra 47 
                 ++p++ ++ G +G+GKs  + +ll+ 
  KHJ35403.1 226 SSPSSAFICGSQGSGKSHTLSCLLEN 251
                 67899******************983 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (644 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       742  (0.0413855); expected 358.6 (0.02)
Passed bias filter:                      561  (0.0312901); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.60u 0.27s 00:00:00.87 Elapsed: 00:00:00.39
# Mc/sec: 4978.63
//
Query:       KHJ35404.1  [L=265]
Description: putative cdp-alcohol phosphatidyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.5e-14   52.3   0.7    7.5e-14   52.3   0.7    2.4  2  CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase


Domain annotation for each model (and alignments):
>> CDP-OH_P_transf  CDP-alcohol phosphatidyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   0.7   4.2e-18   7.5e-14       2      66 .]      62     125 ..      61     125 .. 0.91
   2 ?   -2.1   3.0      0.38   6.9e+03       7      34 ..     130     151 ..     127     239 .. 0.60

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 4.2e-18
                      -HHHHHHHHHHHHHHHHHGGGS-H..HHHHHHHHHHHHHTTHHHHHHHHTT---HHHHHHHHHHH CS
  CDP-OH_P_transf   2 lPnaiTllrlllsvlailllltyyplvlailllliasltDalDGklARrlnqvstlGkllDslaD 66 
                      +Pn++T++rl+++ +  +l+   ++ ++a+ l+ +as+tD++DG++ARr+  ++  G ++D++aD
       KHJ35404.1  62 VPNILTFSRLIAAPIIGYLV-LHDHHTWAFSLFTYASITDLVDGWIARRWALKTVVGTVIDPMAD 125
                      7**********999988766.66677************************99777*********9 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.38
                      HHHHHHHHHHHHHGGGS-H..HHHHHHH CS
  CDP-OH_P_transf   7 Tllrlllsvlailllltyyplvlailll 34 
                      T+l ++l++   l++      +la ++l
       KHJ35404.1 130 TILTICLAIKGSLPV------WLATIVL 151
                      666666666666665......3333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       814  (0.0454013); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.20s 00:00:00.62 Elapsed: 00:00:00.34
# Mc/sec: 2314.45
//
Query:       KHJ35405.1  [L=634]
Description: putative guanylate kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   4.7e-134  447.7  17.9     6e-134  447.4  17.9    1.0  1  efThoc1   THO complex subunit 1 transcription elongation fact


Domain annotation for each model (and alignments):
>> efThoc1  THO complex subunit 1 transcription elongation factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  447.4  17.9  3.4e-138    6e-134       1     485 [.      94     610 ..      94     614 .. 0.90

  Alignments for each domain:
  == domain 1  score: 447.4 bits;  conditional E-value: 3.4e-138
     efThoc1   1 laalLdlcvhlsenelleatlpfeLledlldlltvdgcrkffdYlesriewfkekgfsykapklelLrscNelLrrlsrpedtvfcgriliFLSklfPl 99 
                 +++lLd++++ls++e++e++l+f+L+e+lld++tv+gcr +fdYlesr+e++ +k+f  ++++l +LrscNelLrrlsr+edt fcgr++iFL+++fPl
  KHJ35405.1  94 MWNLLDIVSILSDDEQTEPGLLFWLVEELLDSQTVAGCRNVFDYLESRRETIIAKHF--NSKNLIILRSCNELLRRLSRAEDTAFCGRVFIFLFQSFPL 190
                 69*******************************************************..**************************************** PP

     efThoc1 100 sekSglNlrgefnlenvtefeees......................eeekeeeeak...........................kkkiddnlYkkfWslq 149
                 ++kS++Nlrge+++en+t f+  +                      +        k                             ++ d+lY+ fWslq
  KHJ35405.1 191 GDKSSVNLRGEYHTENITIFDSVPymidsgqvlsgttfhrartsnsQ--------KepffrgikqitedspssnssasfsknlPLMSADQLYPLFWSLQ 281
                 ******************************99999998765554440........23455666666666666677889999999*************** PP

     efThoc1 150 kffrnPlqllnspkfktfekslesvldaflsleeefyreskikkkkkkrralkeklnknskaieekkqeswkefsessfnakyltspkllelqlsDsnF 248
                 ++f++P +l+++  f++f+++le+++  f+s++ e +  + +k+++ +rr+lk+k+++            +++  +++fn+kylts++l+el+++D +F
  KHJ35405.1 282 RYFSQPKELFDRTSFSNFKTGLEATMLMFKSVQRESNVDRISKSTDDSRRSLKRKRSN------------TDDGLANTFNPKYLTSRDLFELEIRDLSF 368
                 ***********************************98887778888888888887655............566789*********************** PP

     efThoc1 249 RrqvLlQllilfqfllslteskeiknf.akvkkkset.....qvLsdedakwiketekkvyellkefyppkgkkFseivehllsreenwvkwKnegcpe 341
                 Rr+vL+Q li+++fllsl+ + + k + a++ + +++     q Ls ed++w+ e++k ++++lk+  +++g++F+++ve++lsr++nw +wK+e+cp+
  KHJ35405.1 369 RRHVLVQSLIILDFLLSLSAKSKEKLAkATIENPNKSviytdQLLSWEDTNWVLEMKKFIADYLKQ--SQDGPFFFRMVETVLSRDKNWARWKIENCPS 465
                 *********************66666666666666669999*************************..******************************* PP

     efThoc1 342 fekpavseeelseapekaekfkkkrlrgfikmGnkeltrlwki..etglealkkkerntlpslesylekikleekdeeaekeee..eeaeekkivkqWr 436
                 + +p v++++++ea+ +a+k+++ ++   +++ + + ++l +   + gle+lk + r ++p + s+  ki+ ++ d e++ +ee  +  +++k++k+Wr
  KHJ35405.1 466 ITRPSVAPQDFVEARLSARKVSTNKKLRPNPIDSFDFNFLVEKegHRGLERLKDPLRFSVPLVSSFKPKIETDDLDLEMASSEEekNLIIQSKASKSWR 564
                 ***********************5555555************999********999*************************99998899********** PP

     efThoc1 437 aLRllrrqslfeFdkvdektglkglfdeleseekkeekekekekleeee 485
                 aLR+++ ++l  Fdk++ +++++++f   e+ +++e ++ e+ +  eee
  KHJ35405.1 565 ALRVASTTKLVAFDKIERSDKIDEIF--REQIKSDEVNNAED-EVVEEE 610
                 **************************..33333333333333.332322 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (634 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       655  (0.036533); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.26s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 4299.85
//
Query:       KHJ35406.1  [L=320]
Description: putative thymidylate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   6.1e-106  353.4   0.0     7e-106  353.2   0.0    1.0  1  Thymidylat_synt  Thymidylate synthase


Domain annotation for each model (and alignments):
>> Thymidylat_synt  Thymidylate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  353.2   0.0  3.9e-110    7e-106       2     268 .]      26     320 .]      25     320 .] 0.93

  Alignments for each domain:
  == domain 1  score: 353.2 bits;  conditional E-value: 3.9e-110
                      HHHHHHHHHHHH-EEEE-TTSSEEEEEEE.EEEEEEGGG...CB----SSST--HHHHHHHHHHHHTT--BTHHHHTTT--TTH.....HHHHH CS
  Thymidylat_synt   2 qYldlvrkileeGeekedRtgtgtisvfg.aqlrfdlse...gefPllTtkkvflksvieEllWflsgetnvkeLqekgvkiWd.....ewade 86 
                      qYl+l+r+il++Ge+++dRtgtgt+s+f+ + l+f+ls      +Pl+Ttk+vf++++i+EllWf+sg+t+   L+e g+kiWd     e++d+
       KHJ35406.1  26 QYLNLIREILQTGEHRPDRTGTGTYSIFApRPLKFQLSAsgkPILPLITTKRVFIRAIITELLWFISGSTSSIPLAEAGIKIWDgngtrEYLDS 119
                      9****************************999*****98555579***************************************7766655554 PP

                      T.......TB-SSSHHHHHHHBTST........TTSSB-HHHHHHHHHHHSTT-ST-EEE---GGGGGGSSS--SEEEEEEEE...SEE....T CS
  Thymidylat_synt  87 e.......gdlgpvYGkqwrkfkae........egkkidqlakvidqlkenpdsRriivsawnpaeldkmaLppChvlfqfyvk.dkke....g 160
                              gdlgp+YG+qwr+f+ae        +gk++dql++vi++lk+np++Rrii++awnp++l+ maLppCh+l+qfyv+  +      g
       KHJ35406.1 120 VglshravGDLGPIYGFQWRHFGAEyvdattdyTGKGVDQLNDVITKLKTNPYDRRIILTAWNPSDLKLMALPPCHILAQFYVSfPR-GdkniG 212
                      467777779*************999999**999**********************************66**************8533.335667 PP

                      EEEEEEEEEEEETTTHHHHHHHHHHHHHHHHHHHHT-EEEEEEEEEEEEEEEGGGHHHHHHHHTS---S--EEEE--SSTHSGGG--GGGEEEE CS
  Thymidylat_synt 161 kLslqlyqRSaDvflGvpFNiasyalLthmlaqvtglkpgelihtigdaHiYsnhveqvkeqlereprelpklelnkekkvsiedfeledfele 254
                      +L++qlyqRS+D++lGvpFNiasyalLthmla+v+gl+pg+l+h +gdaHiY +h e +k qlerepr++p++e++++k  si+ ++++df ++
       KHJ35406.1 213 TLHCQLYQRSCDMGLGVPFNIASYALLTHMLAHVCGLHPGTLTHAMGDAHIYADHKEPLKIQLEREPRPFPEIEIKRQKYGSIDGWHVDDFIIK 306
                      7**************************************************************************966655************* PP

                      S----SXXXXXXX. CS
  Thymidylat_synt 255 nYkphpkikakvav 268
                      +Y+ph++i ++++v
       KHJ35406.1 307 EYQPHNSIPMNMSV 320
                      ************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (320 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       379  (0.0211389); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.24s 00:00:00.70 Elapsed: 00:00:00.41
# Mc/sec: 2364.01
//
Query:       KHJ35407.1  [L=1400]
Description: putative dead helicases superfamily protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
          0 1024.1   2.2          0 1023.8   2.2    1.1  1  Aquarius_N       Intron-binding protein aquarius N-terminus
    2.6e-26   92.5   0.0    5.1e-26   91.5   0.0    1.5  1  AAA_12           AAA domain
    5.6e-21   75.5   0.0    5.3e-20   72.3   0.0    2.3  1  AAA_11           AAA domain
      8e-07   29.0   0.0     0.0004   20.2   0.0    2.3  2  AAA_30           AAA domain
    7.1e-06   26.4   0.0    1.4e-05   25.4   0.0    1.6  1  AAA_19           AAA domain
    3.1e-05   24.0   0.0    9.1e-05   22.5   0.0    1.7  1  ResIII           Type III restriction enzyme, res subunit
    0.00078   19.2   0.1      0.023   14.4   0.1    3.0  3  Viral_helicase1  Viral (Superfamily 1) RNA helicase
    0.00085   19.1   0.8     0.0033   17.2   0.5    2.2  2  UvrD_C_2         UvrD-like helicase C-terminal domain
     0.0027   18.1   0.1      0.017   15.5   0.0    2.3  2  AAA_16           AAA ATPase domain
     0.0045   17.4   0.0      0.012   16.1   0.0    1.7  1  AAA              ATPase family associated with various cellul
  ------ inclusion threshold ------
      0.027   14.7   0.0        2.4    8.4   0.0    2.5  2  DUF2774          Protein of unknown function (DUF2774)
      0.031   14.3   0.0        0.1   12.6   0.0    1.8  1  AAA_5            AAA domain (dynein-related subfamily)
      0.036   13.3   0.4       0.15   11.3   0.0    2.1  2  DUF2075          Uncharacterized conserved protein (DUF2075)
      0.048   13.4   0.0        0.1   12.3   0.0    1.5  1  DEAD             DEAD/DEAH box helicase
      0.061   12.8   0.1       0.52    9.8   0.0    2.3  2  UvrD-helicase    UvrD/REP helicase N-terminal domain
      0.098   11.7   0.0       0.19   10.8   0.0    1.3  1  Parvo_NS1        Parvovirus non-structural protein NS1


Domain annotation for each model (and alignments):
>> Aquarius_N  Intron-binding protein aquarius N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ! 1023.8   2.2         0         0       3     797 .]      25     804 ..      23     804 .. 0.97

  Alignments for each domain:
  == domain 1  score: 1023.8 bits;  conditional E-value: 0
  Aquarius_N   3 edelaklAkkhWlkk.kkskkkkvkpevvkkilkeelekekfslkslllLevlqyLEkyLwpnytedasnahvllivlmvnekfrerleawelfedrpe 100
                 e+++ +lA++hWlk+ +k++k kvk++++k+++++ lek++f +k l+ Le+ q+LE yLwp+y+ed+sn hvlli l+   ++re+l++w++f +rp+
  KHJ35407.1  25 ENSFLALARTHWLKSsNKATKIKVKSDILKNEIWDVLEKDDFGVKLLSDLESVQILEAYLWPGYSEDSSNFHVLLITLISIIRTREHLPVWDIFLSRPD 123
                 68999*********988999******************************************************************************* PP

  Aquarius_N 101 efsslfrrvlslsldeslslkertallvFlinaFqSleselvrkevaklvslsiWhnL.seekreeelekspklkkawralkkkydkadeatkaklrfe 198
                 ef+slfrr++slsld +ls ++rt++l+F+i +FqSl+  +v+ke+a+lvs+siWhn+ s++kr++ ++k+++l+kawra++k+yd+ de +k+klrf+
  KHJ35407.1 124 EFPSLFRRIVSLSLDPTLSATIRTYILSFIIISFQSLDFGIVKKECAHLVSISIWHNIhSDKKRNQIFDKNAQLRKAWRATEKRYDASDELVKSKLRFD 222
                 *************************************************************************************************** PP

  Aquarius_N 199 rsflyklildflevleeaeeegeleeekvlyceRflelliDLesqLptRRyvntllkdlhllvairlsklvkdeegklfrqlldlLkfYtkFeiddqtg 297
                 rs+ly+lildfl++l+  +++     ++++yceRf+e+l+DL+sqLptRRyvntl++dl+ l+airls ++++ee++l+r+l++lLk+Yt+F++dd+tg
  KHJ35407.1 223 RSWLYTLILDFLKQLQCDKKK----PNNIRYCERFIEFLSDLQSQLPTRRYVNTLIQDLNTLSAIRLSFVFNQEENNLIRDLYALLKYYTYFPVDDHTG 317
                 ****************99775....788*********************************************************************** PP

  Aquarius_N 298 eqlseeevteahyaklakLqrvalkkfkekLkelaLsnvgsidkreeLekhleaLsdeeleelaallklrtskkpesekleadrkfllevlvskfekrk 396
                 +++ ++ ++e+h++ la+Lqr+al+ fkekL++laLsn+gsidkr+eL+ hleaL+dee+ +l++ll+lrt  +p+s++l++dr+f++evl++++e++k
  KHJ35407.1 318 TPYGHQGAYEKHCSILATLQRTALNFFKEKLTILALSNYGSIDKRSELQIHLEALTDEEIIHLCELLQLRTA-YPTSSSLKVDRNFFIEVLITHHERKK 415
                 *********************************************************************999.************************** PP

  Aquarius_N 397 sqqeainelpllPtekvlfdenlvrsesydgerpLalpKLnLQfLtlgDyLlRnfnLfrlEstYeirkdiedavkrlkpklkeegetsfeGfsrmalpi 495
                 ++qe +++l++lPte +lf+++l+r+++y+g++pLa+pKLnLQ+L++gD+L+R+++L+r Es+Yeirk+ie++vkrlkp+  ++g+t+feGfs+malpi
  KHJ35407.1 416 NYQEVARDLTILPTELSLFESALLRNDTYNGSQPLAIPKLNLQYLSVGDFLWRSLILHRSESYYEIRKNIEEIVKRLKPTEISNGSTRFEGFSKMALPI 514
                 *************************************************************************************************** PP

  Aquarius_N 496 skfaivevakpkvGekkPsaVraevtldlsrlkeevrreWesLrkhDvvFLlavrpkke.lgekekkkkgekssfaeklglkavRgaevievldeegrv 593
                 +k++i+eva+++vG++kPs Vrae+ ld+ +l++++++eW sLr++DvvF++a++++++ +g+       e+ + a+klgl+++R ae+i++ de+grv
  KHJ35407.1 515 TKPSILEVAPAHVGSDKPSIVRAEIKLDFGHLSDNIQKEWCSLRPDDVVFIIALQAPDQlIGN----L--ETPPDAQKLGLRYLRVAEIIQLQDEKGRV 607
                 ********************************************************9963333....2..24689************************ PP

  Aquarius_N 594 leeaekkegeekrpkgekrtlrvkLDaaqYkaDlekaakgkedvYetlNvlvRRkakeNnFkavLetirdLmnsdvvvpdWLhdvfLGYGdPaaAtYkk 692
                 l+++  ++g+  rp+   r+l+vkLDa +Yk+Dl+++++gk+d+Ye++N+lvRR+++eNnFk++Le+i++L++sdv++++WL +vfLGYGdPa A+Y++
  KHJ35407.1 608 LNDQYYENGQ-DRPQ--LRKLQVKLDALAYKEDLNRVNAGKSDIYEHMNILVRRRGRENNFKPILESIQSLTLSDVPLAPWLLEVFLGYGDPACASYTR 703
                 ***8877666.8999..********************************************************************************** PP

  Aquarius_N 693 lpnrlktvdfrDTFldwqHliesfpgkkvepeeevkssfepPyvlefvekkeeaakakkskkrrrdkeeaeekekeeetlkvstykppnrgPYpvdapk 791
                 l+nr++++d+rDTFldw+Hl+e++ g+ vep+e+ +s f+pPy +++  k+e++ ++++skk+r ++++      ++e ++vstyk pn+gPYp+dapk
  KHJ35407.1 704 LKNRIDKIDYRDTFLDWEHLCECLSGNVVEPSENLSSGFGPPYIINTICKTENEIQTETSKKKRLNTTPLP----KTEVFRVSTYKLPNTGPYPTDAPK 798
                 ***********************************************998888888888888888777665....3579******************** PP

  Aquarius_N 792 kNsvrF 797
                 +N++rF
  KHJ35407.1 799 LNKIRF 804
                 *****9 PP

>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.5   0.0   4.6e-29   5.1e-26       1     197 [.    1114    1305 ..    1114    1307 .. 0.84

  Alignments for each domain:
  == domain 1  score: 91.5 bits;  conditional E-value: 4.6e-29
      AAA_12    1 lerSlferllkkekekvvlLdtqYRmhpeIsrfpsklfYk..gkLkdaesvkkreleaqealeepleplvfidvekseeekekkeksyiNeeEaelv 95  
                  l++Slf r+++ +  + + Ld+q R +p+I+ + s   Y+  g+L   ++ ++++l+ +  ++  ++ + +id +++ e++ +  +   N  Eae  
  KHJ35407.1 1114 LDESLFSRFIRLG-VPAIKLDQQGRARPSIAALYSWR-YQnlGNLPIVSTSAEYQLS-NAGFKYDYQFINVIDYKGKGESEPT-PHFTQNLGEAEYT 1206
                  689**********.******************98855.5524556666666666666.4444444444555555555555544.38999******** PP

      AAA_12   96 vklvekllkkgseeerkkigvitpYraqvellkkklkekeeekseke..ievntvdgfQGrekdviilslVRsnekkeigflkderrlNValTRAks 190 
                  v +++++   g+ +   ki ++++Y+ q  l+k+ l+++  ++s      +v tvd++QG+++d++ilsl R+   +++g l+d rrl+Val+RA+ 
  KHJ35407.1 1207 VAIYQYMRLLGYPA--AKISILATYAGQRALIKDVLAHRCGRNSLFGypKTVTTVDKYQGEQNDYVILSLTRT---SRVGYLRDVRRLTVALSRARL 1298
                  *******9999999..9********************98888765548899*********************9...69******************* PP

      AAA_12  191 kliivGn 197 
                   l+ivG 
  KHJ35407.1 1299 GLYIVGR 1305
                  ******7 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.3   0.0   4.8e-23   5.3e-20       7     258 ..     809    1103 ..     800    1105 .. 0.74

  Alignments for each domain:
  == domain 1  score: 72.3 bits;  conditional E-value: 4.8e-23
      AAA_11    7 reaiksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCapSNaAvDellerllrglldsegekykpkivRvgneeerisea 103 
                  ++ai s  +   +tli GPPGtgKT + +++++ +        ++ +++r L+ a+SN A ++l ++++           +  ++R+g++e + +++
  KHJ35407.1  809 AKAIISGSQLG-LTLIVGPPGTGKTDVATQIINII-------YHNFPDQRTLLIAHSNQALNQLFQKIVA------LDIDSRHLLRLGHGE-DLDTE 890 
                  44444443333.7**********************.......2589************************......889999*********.44544 PP

      AAA_11  104 vksvsleekvekrlekee....................................kaqlakeiskeleklakelrafeeeeek............... 149 
                  ++  +   +ve+ le++e                                     ++  kei+k                 +               
  KHJ35407.1  891 ANFSK-YGRVESFLENREsylrevdrlaenfgapgahgnsaetagyfnlvyvepAWKRFKEITK-----------------Nlditsedivqafpfh 969 
                  44444.4566666666555566777777777777777777777776655555553333333333.................0333333333355556 PP

      AAA_11  150 .............eklkkskekskskleqerrklkkerkels..keleeaeesleeevldeaeivltTlsga..gsklleklakkfdvviIDEAaqa 229 
                               ++ +++  + ++      +k+  e  +++  + l++++++++  + +ea+i++ T + a   ++++ +l  ++d vi  EAaq 
  KHJ35407.1  970 hyfsnapqplfpvNSGREEILEIANGCYYHISKIFTELANVRpfEVLKRDRDKANYLLTSEARIIAMTSTHAaiRRREIASLGFQYDNVIMEEAAQI 1066
                  677889999999956666655555555555555555554444338999******9**********987777633678888887799*********** PP

      AAA_11  230 vEpstliPlrlga........kkvvLvGDpkQLpatv 258 
                  +E++ ++Pl l++        k+vvL GD+ Q  +++
  KHJ35407.1 1067 TEIENFVPLALQTpkngeiplKRVVLCGDHFQNSPII 1103
                  *********999999*****************88887 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.2   0.0   3.5e-07    0.0004       3      65 ..     805     867 ..     803     900 .. 0.80
   2 !    6.3   0.0    0.0061       6.9      65     141 ..    1030    1112 ..    1015    1141 .. 0.71

  Alignments for each domain:
  == domain 1  score: 20.2 bits;  conditional E-value: 3.5e-07
      AAA_30   3 naeQaaavealltsgdrvavltGpAGtGKttalkalreaweaa..ggrviglAptgkaAkvLaee 65 
                 ++ Qa+a+  + +s+  +++++Gp+GtGKt + +++ +++ ++   +r +++A++++a ++L ++
  KHJ35407.1 805 TPTQAKAI--ISGSQLGLTLIVGPPGTGKTDVATQIINIIYHNfpDQRTLLIAHSNQALNQLFQK 867
                 56788888..7788888*******************8888777666************9998764 PP

  == domain 2  score: 6.3 bits;  conditional E-value: 0.0061
      AAA_30   65 elgieastiakllkrlkgrarlepg.tllivDEagmv.dtkqlaallkaaekag....akvilvGDerQlasVeaGgvlrdlv 141 
                  e+ i a+t  +   r ++ a+l  + + +i  Ea+ +  ++++  l+ +  k+g     +v+l+GD+ Q +++ +  ++r+ +
  KHJ35407.1 1030 EARIIAMTSTHAAIRRREIASLGFQyDNVIMEEAAQItEIENFVPLALQTPKNGeiplKRVVLCGDHFQNSPIIQNLAFRHYA 1112
                  555555555555545555566666777788888887755666777777777664333479**************999999884 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.4   0.0   1.3e-08   1.4e-05       1      77 [.     808     881 ..     808    1100 .. 0.80

  Alignments for each domain:
  == domain 1  score: 25.4 bits;  conditional E-value: 1.3e-08
      AAA_19   1 qreave.alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgaeatTiHrlal 77 
                 q +a+   ++ ++ l++++pGtGKT v ++i++++ ++     ++ ll+a  ++A ++l +++  + ++++  H l l
  KHJ35407.1 808 QAKAIIsGSQLGLTLIVGPPGTGKTDVATQIINIIYHNFP--DQRTLLIAHSNQALNQLFQKI--VALDIDSRHLLRL 881
                 6677766899999**********************99984..59*****************99..5555555554422 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.5   0.0   8.1e-08   9.1e-05      27      80 ..     821     874 ..     800     932 .. 0.78

  Alignments for each domain:
  == domain 1  score: 22.5 bits;  conditional E-value: 8.1e-08
                 EEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG CS
      ResIII  27 glikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflse 80 
                  li+ + GtGKT va+++i  ++++++ +++l+++++++ l+q+ +++  +  +
  KHJ35407.1 821 TLIVGPPGTGKTDVATQIINIIYHNFPDQRTLLIAHSNQALNQLFQKIVALDID 874
                 57999***************************************9987544444 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.1   0.0      0.59   6.6e+02       2      21 ..     822     841 ..     821     867 .. 0.78
   2 ?   -0.4   0.0      0.71   7.9e+02      88     119 ..    1087    1119 ..    1083    1127 .. 0.66
   3 !   14.4   0.1   2.1e-05     0.023     183     233 ..    1247    1303 ..    1226    1304 .. 0.79

  Alignments for each domain:
  == domain 1  score: -0.1 bits;  conditional E-value: 0.59
  Viral_helicase1   2 vvhGvpGcGKStlirkllrt 21 
                      ++ G pG GK+ +  ++++ 
       KHJ35407.1 822 LIVGPPGTGKTDVATQIINI 841
                      67899*******99999986 PP

  == domain 2  score: -0.4 bits;  conditional E-value: 0.71
  Viral_helicase1   88 aklvilfGDplQipfhsrnasf.llahlpssls 119 
                       +k v+l GD++Q + + +n  f  +ahl  sl 
       KHJ35407.1 1087 LKRVVLCGDHFQNSPIIQNLAFrHYAHLDESLF 1119
                       6889********877654443324555555554 PP

  == domain 3  score: 14.4 bits;  conditional E-value: 2.1e-05
  Viral_helicase1  183 r.......evttvhevqGltfdkVtlvllketdlelisesrenllvAlTRhrkslvil 233 
                       +        vttv   qG++ d V+l l++++    + ++   l vAl+R+r +l+i+
       KHJ35407.1 1247 NslfgypkTVTTVDKYQGEQNDYVILSLTRTSRVG-YLRDVRRLTVALSRARLGLYIV 1303
                       2555555569*******************665555.6667999*********999986 PP

>> UvrD_C_2  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       2.4   2.7e+03      34      42 ..     222     230 ..     210     230 .. 0.76
   2 !   17.2   0.5     3e-06    0.0033       4      52 .]    1256    1303 ..    1254    1303 .. 0.83

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 2.4
    UvrD_C_2  34 rrrlLYtav 42 
                  r +LYt +
  KHJ35407.1 222 DRSWLYTLI 230
                 599****76 PP

  == domain 2  score: 17.2 bits;  conditional E-value: 3e-06
    UvrD_C_2    4 altihkaQGsefpaVivfdpdlaaarmgelrrrlLYtavTRAreklilv 52  
                  ++t+ k QG + ++Vi+   + +++ ++    r L +a++RAr  l++v
  KHJ35407.1 1256 VTTVDKYQGEQNDYVIL-SLTRTSRVGYLRDVRRLTVALSRARLGLYIV 1303
                  89***************.44455555454499***************98 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0         3   3.3e+03      71     135 ..     177     242 ..     157     280 .. 0.64
   2 !   15.5   0.0   1.5e-05     0.017      19      87 ..     812     870 ..     807     930 .. 0.63

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 3
      AAA_16  71 alaqalareellrqlldeaesaeleawrekleealaavpelagaea....srllellkrllallsrder 135
                 ++ ++   ++  +q+ d+ +++++ awr++ e+++ a++el  ++     s l+ l+ ++l++l++d++
  KHJ35407.1 177 IWHNIH-SDKKRNQIFDK-NAQLRKAWRAT-EKRYDASDELVKSKLrfdrSWLYTLILDFLKQLQCDKK 242
                 444444.44556667766.55588888885.55555555555555567777777777777777777554 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 1.5e-05
      AAA_16  19 vrsgrp.elvllsGesGvGKsslvrellralekd....ggiflrgkcdqlesaipysalaqalareellrqlld 87 
                 + sg+  +l+l++G++G+GK+ +++++ + +  +    + ++++                qal + +l++++ +
  KHJ35407.1 812 IISGSQlGLTLIVGPPGTGKTDVATQIINIIYHNfpdqRTLLIAH-------------SNQAL-N-QLFQKIVA 870
                 55666679******************9986555522222222222.............22222.2.33333333 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0     1e-05     0.012       2      53 ..     822     868 ..     821     879 .. 0.74

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 1e-05
                 EEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSSSTTHHHHHHHHHHHHH CS
         AAA   2 llyGppGtGKTllakavakelgvefleisgsellskyvgesekkirelfkea 53 
                 l++GppGtGKT +a ++++ +  +f     ++ +  ++ +s++ +++lf+++
  KHJ35407.1 822 LIVGPPGTGKTDVATQIINIIYHNF-----PDQRTLLIAHSNQALNQLFQKI 868
                 899***************9975544.....3333334567777777777765 PP

>> DUF2774  Protein of unknown function (DUF2774)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0    0.0022       2.4       6      30 ..     406     431 ..     403     435 .. 0.85
   2 ?    3.3   0.0     0.082        92      14      33 ..     946     965 ..     940     967 .. 0.88

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.0022
     DUF2774   6 vhfl.hesgknFveIAkkldirakdv 30 
                 v +  he +kn++e+A+ l i +++ 
  KHJ35407.1 406 VLIThHERKKNYQEVARDLTILPTEL 431
                 555569***************99986 PP

  == domain 2  score: 3.3 bits;  conditional E-value: 0.082
     DUF2774  14 knFveIAkkldirakdvakl 33 
                 k F eI k+ldi+ +d+ ++
  KHJ35407.1 946 KRFKEITKNLDITSEDIVQA 965
                 6799************9876 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0   9.2e-05       0.1       3      44 ..     822     867 ..     821     877 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 9.2e-05
                 EEE--SSSSHHHHHHHGGGGB....S--EEEEE--TT--HHHHH-- CS
       AAA_5   3 lLvGppGtgKselaerlaaal....nreveyvqltrdtteedlkgr 44 
                 l+vGppGtgK+ +a ++   +     ++ +    +++   ++l+++
  KHJ35407.1 822 LIVGPPGTGKTDVATQIINIIyhnfPDQRTLLIAHSNQALNQLFQK 867
                 89***************99998877555555555666666666665 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00013      0.15       4      55 ..     821     873 ..     819     887 .. 0.88
   2 ?   -1.5   0.3         1   1.2e+03     345     360 ..    1288    1303 ..    1285    1304 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00013
     DUF2075   4 vlVtGvaGtGKtvvllnllael.eddeeertavylsvNhplvlvlrealakke 55 
                  l+ G +GtGKt v+ ++++ + ++  ++rt  ++  N++l++  ++ +a + 
  KHJ35407.1 821 TLIVGPPGTGKTDVATQIINIIyHNFPDQRTLLIAHSNQALNQLFQKIVALDI 873
                 6899****************99889999999999999***9999999887665 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1
     DUF2075  345 ayrVLLtRGrkGlyiy 360 
                  ++ V L+R+r Glyi+
  KHJ35407.1 1288 RLTVALSRARLGLYIV 1303
                  689***********96 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   9.2e-05       0.1       1      71 [.     805     872 ..     805     914 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 9.2e-05
                 -HHHHHHHHHHHTTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   1 tdiQaeaiplilgggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfk 71 
                 t+ Qa+ai    + g  l+ ++ G+GKT ++   +++i+y+  + +  ++l+++ + +  +q ++++  + 
  KHJ35407.1 805 TPTQAKAIISGSQLGLTLIVGPPGTGKTDVA-TQIINIIYH--NFPDQRTLLIAHSNQALNQLFQKIVALD 872
                 789999999999999***************5.567779998..99999********999999999886654 PP

>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.1      0.42   4.7e+02     203     241 ..     219     258 ..      28     300 .. 0.62
   2 ?    9.8   0.0   0.00047      0.52       2      68 ..     805     878 ..     804     964 .. 0.81

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.42
                    S.TSCSHHHHHHHHHHHHHHHHHHHHTCEEHHHHHHHHHH CS
  UvrD-helicase 203 f.ekasdlqkkiaeflkeyqeqkkeenalDfsdllhalle 241
                         s l+  i +flk++q  kk+ n++ + ++ +++l+
     KHJ35407.1 219 LrFDRSWLYTLILDFLKQLQCDKKKPNNIRYCERFIEFLS 258
                    1233444555555666666666666665555555555554 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00047
                    SHHHHHHHHS..-SSEEEEEE-TTSSHHHHHHHHHHHHHHTSSSTGGGEEEEESSHHHHHHHHHHHHH.......H CS
  UvrD-helicase   2 npeqreaias..lggpilveAsAGsGKTfvlaerilrlikeeeiepdrilvvTFTnkAaeElkeRiee.......a 68 
                    +p q +ai s    g +l++  +G+GKT v +  i++ i ++    +r l++   n+A + l ++i +       +
     KHJ35407.1 805 TPTQAKAIISgsQLGLTLIVGPPGTGKTDVAT-QIINIIYHN-FPDQRTLLIAHSNQALNQLFQKIVAldidsrhL 878
                    677888888865567899***********966.588989888.888889999999999999999997755555441 PP

>> Parvo_NS1  Parvovirus non-structural protein NS1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00017      0.19     118     161 ..     822     869 ..     798     872 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00017
   Parvo_NS1 118 wfyGpantGktnlae....aIakavplygcvnwtNenfpfndcfkkll 161
                 +++Gp+ tGkt++a      I + +p+ + + +  +n  +n+ f+k++
  KHJ35407.1 822 LIVGPPGTGKTDVATqiinIIYHNFPDQRTLLIAHSNQALNQLFQKIV 869
                 677***********95555667899******999999999*****997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1400 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       505  (0.0281667); expected 358.6 (0.02)
Passed bias filter:                      426  (0.0237604); expected 358.6 (0.02)
Passed Vit filter:                        71  (0.00396006); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.92u 0.29s 00:00:01.21 Elapsed: 00:00:00.46
# Mc/sec: 9086.35
//
Query:       KHJ35408.1  [L=133]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       698  (0.0389313); expected 358.6 (0.02)
Passed bias filter:                      241  (0.0134419); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.24s 00:00:00.62 Elapsed: 00:00:00.39
# Mc/sec: 1014.95
//
Query:       KHJ35409.1  [L=232]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (232 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       681  (0.0379832); expected 358.6 (0.02)
Passed bias filter:                      415  (0.0231469); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.18s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1989.14
//
Query:       KHJ35410.1  [L=493]
Description: putative lyr family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        8.4    6.7  11.9        1.5    9.1   1.1    3.6  3  DUF4611   Domain of unknown function (DUF4611)


Domain annotation for each model (and alignments):
>> DUF4611  Domain of unknown function (DUF4611)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.5     0.026   4.6e+02      61      90 ..      88     116 ..      67     119 .. 0.62
   2 ?    1.5   0.2      0.02   3.6e+02      58      96 .]     188     226 ..     155     226 .. 0.71
   3 ?    9.1   1.1   8.1e-05       1.5      39      85 ..     262     308 ..     231     316 .. 0.88

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.026
     DUF4611  61 agdeeeegededdeeeekniknktksdePp 90 
                 ++   + +e+e d+e+++  ++ +k +ePp
  KHJ35410.1  88 RPGPVSTEEEEADAEATNG-EKVEKKEEPP 116
                 5555556666666666444.4445555777 PP

  == domain 2  score: 1.5 bits;  conditional E-value: 0.02
     DUF4611  58 vaaagdeeeegededdeeeekniknktksdePpaKrtKp 96 
                 v+a+++   +++ ++de+  +n ++  k ++P  K++Kp
  KHJ35410.1 188 VKAEEEVIPKSNLNSDEQTPQNQSTLLKKKGPVRKKIKP 226
                 444444445566677777778888888999*******98 PP

  == domain 3  score: 9.1 bits;  conditional E-value: 8.1e-05
     DUF4611  39 reevsellstlveqeaqddvaaagdeeeegededdeeeekniknktk 85 
                 + +++ +l + ++ e+ d+   + ++ e ++ e++eee + i+nk+ 
  KHJ35410.1 262 KGLITSVLANSEDIEIGDESVGNSEDGEADDGEENEEEGEIIENKSI 308
                 67899999999999999999999999999999999999999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (493 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      296  (0.0165096); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.22s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 3772.13
//
Query:       KHJ35411.1  [L=122]
Description: hypothetical protein EV44_g4174 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (122 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      433  (0.0241508); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.26s 00:00:00.65 Elapsed: 00:00:00.42
# Mc/sec: 875.93
//
Query:       KHJ35412.1  [L=425]
Description: putative methionyl-trna formyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-23   83.3   0.0    2.4e-23   82.8   0.0    1.2  1  Formyl_trans_N  Formyl transferase


Domain annotation for each model (and alignments):
>> Formyl_trans_N  Formyl transferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.8   0.0   1.3e-27   2.4e-23       2     154 ..      36     194 ..      35     221 .. 0.86

  Alignments for each domain:
  == domain 1  score: 82.8 bits;  conditional E-value: 1.3e-27
                     EEEEEESESSHHHHHH.HHHHHHTTSE.CEEEEEEESCTTEHCHHHHHHCCHCCCECHHCC...SCCCCCCCHHHHHHHHCTT-SEEEEES--S- CS
  Formyl_trans_N   2 kivvlisgtgsnlqal.ldalkkgsle.advvlvvsnkdkaaglekaeaasiptkvfeekk...leprsqfeeelaeelkelkadlivlagymkl 91 
                     +i++ +s+++s ++ + l++ k+++ +    + v+++++k+ g++ ++ a+ p+k++++     +++ ++ ++      +    +l+++++++++
      KHJ35412.1  36 RILFCGSDEFSSASLIsLKEEKTKNPGlIRSIDVLCRPAKKVGRGMKKFAEVPIKAVAQDIgfpVHETEKLDQWELPRPEGDDINLVIAVSFGLF 130
                     99**********9999766666666668999************************99999854433333333333334444456689******** PP

                     --HHHHHSSTTSEEEEESSSTTTTBSS-HHHHHHHTTSSEEEEEEEE--.SSSSTS-EEEEEEE CS
  Formyl_trans_N  92 lpkelvqavrlkilniHpSLLPrfkGaaaiqraleaGdketGvtihfvd.eelDtGailaqkkv 154
                     lp  +++ v+ + ln+HpS+LP f+Gaa+i+r+l  G   tGvt +++d  ++D+G ++aq+k+
      KHJ35412.1 131 LPARILRLVKYGGLNLHPSILPNFRGAAPIERTLMTGYGFTGVTLQTLDyKKFDHGIVIAQTKP 194
                     *************************************************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (425 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       393  (0.0219198); expected 358.6 (0.02)
Passed bias filter:                      381  (0.0212505); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.21s 00:00:00.72 Elapsed: 00:00:00.38
# Mc/sec: 3327.41
//
Query:       KHJ35413.1  [L=692]
Description: putative smc domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.1e-09   36.2  25.8    4.1e-08   33.5   6.1    3.8  4  Fungal_TACC      Fungal Transforming acidic coiled-coil (TACC
  ------ inclusion threshold ------
      0.013   15.5   7.4        1.1    9.4   2.5    2.8  2  Unstab_antitox   Putative addiction module component
       0.52   10.7   9.8        3.9    7.9   3.0    3.5  3  TSC22            TSC-22/dip/bun family
       0.54    9.2   6.4       0.55    9.2   5.1    1.6  1  L_lactis_ph-MCP  Lactococcus lactis bacteriophage major capsi
       0.55    9.8  15.7        1.4    8.4   2.6    2.6  2  Phage_GPO        Phage capsid scaffolding protein (GPO) serin
        2.2    8.7  13.5         42    4.6   0.1    4.3  3  FlaC_arch        Flagella accessory protein C (FlaC)
        4.9    7.2  29.1       0.31   11.1  12.2    2.7  2  UPF0242          Uncharacterised protein family (UPF0242) N-t
          8    6.6  17.3        1.3    9.2   1.4    3.6  3  bZIP_1           bZIP transcription factor
        8.5    6.3  18.0         12    5.8   1.7    4.3  4  PKcGMP_CC        Coiled-coil N-terminus of cGMP-dependent pro


Domain annotation for each model (and alignments):
>> Fungal_TACC  Fungal Transforming acidic coiled-coil (TACC) proteins
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.41   8.2e+02      43      71 ..     320     348 ..     317     354 .. 0.70
   2 ?   -1.9   0.2       2.4   4.7e+03      50      50 ..     372     372 ..     337     411 .. 0.55
   3 !   33.5   6.1   2.1e-11   4.1e-08       6      58 ..     466     518 ..     462     524 .. 0.93
   4 !   10.4   5.7   0.00034      0.68      37      76 ..     537     576 ..     531     577 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.41
  Fungal_TACC  43 lelenkslkqeieqLkkqleaerkEKqeL 71 
                  le  ++++  ei +Lk  l+ +++E q+L
   KHJ35413.1 320 LESLKSGFLCEISSLKASLSGKEAEVQSL 348
                  55556677778888888888777777765 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 2.4
  Fungal_TACC  50 l 50 
                  +
   KHJ35413.1 372 H 372
                  2 PP

  == domain 3  score: 33.5 bits;  conditional E-value: 2.1e-11
  Fungal_TACC   6 lqelaedLYvqYSsKHEqKVkllkkgyeakyqkkldklelenkslkqeieqLk 58 
                  +++++++L   Y  KHE KV+ lkk+ye ++ k++++le++ + l +e ++Lk
   KHJ35413.1 466 VENVSKELHALYKDKHEAKVAALKKSYERRWDKRVHELEKQVEDLIKENKELK 518
                  6899********************************************99987 PP

  == domain 4  score: 10.4 bits;  conditional E-value: 0.00034
  Fungal_TACC  37 qkkldklelenkslkqeieqLkkqleaerkEKqeLlklld 76 
                   +k+++le + +  ++e ++L+k l+ er+EK++L++ ++
   KHJ35413.1 537 TEKIKELEIKIEITQTENTELQKFLNKERAEKEKLVQTVE 576
                  6899********************************9887 PP

>> Unstab_antitox  Putative addiction module component
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   2.5   0.00053       1.1      11      43 ..     390     420 ..     384     426 .. 0.90
   2 ?    7.8   0.3    0.0018       3.5      31      48 ..     429     446 ..     424     449 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00053
  Unstab_antitox  11 aedLwdSLdeeadpelpaawkaElerRlaeyea 43 
                     +e L++SL e ++  l+++ ++Ele Rlae +a
      KHJ35413.1 390 METLLRSLQE-QIL-LSEQNREELEGRLAESDA 420
                     9*********.999.**************9776 PP

  == domain 2  score: 7.8 bits;  conditional E-value: 0.0018
  Unstab_antitox  31 kaElerRlaeyeaGkvka 48 
                     ++E+e+R+a+++aG++++
      KHJ35413.1 429 AQEAESRVAALRAGRSSP 446
                     79************9976 PP

>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.8   0.0         2     4e+03      24      44 ..     332     352 ..     319     368 .. 0.63
   2 ?    5.0   0.1     0.015        29      22      42 ..     499     519 ..     497     532 .. 0.76
   3 ?    7.9   3.0    0.0019       3.9      21      50 ..     538     567 ..     534     573 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.8 bits;  conditional E-value: 2
       TSC22  24 keLeernseleeENslLkala 44 
                   L +  s  e E + Lk+ +
  KHJ35413.1 332 SSLKASLSGKEAEVQSLKSAV 352
                 555555555555555555443 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.015
       TSC22  22 kIkeLeernseleeENslLka 42 
                 ++ eLe++++ l +EN+ Lk 
  KHJ35413.1 499 RVHELEKQVEDLIKENKELKV 519
                 577889999999999988885 PP

  == domain 3  score: 7.9 bits;  conditional E-value: 0.0019
       TSC22  21 ekIkeLeernseleeENslLkalaspeqle 50 
                 ekIkeLe +++  ++EN+ L++ +++e  e
  KHJ35413.1 538 EKIKELEIKIEITQTENTELQKFLNKERAE 567
                 89********************99998755 PP

>> L_lactis_ph-MCP  Lactococcus lactis bacteriophage major capsid protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   5.1   0.00028      0.55      19      79 ..     499     562 ..     484     575 .. 0.80

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00028
  L_lactis_ph-MCP  19 kvreleakveelnkereelkkereasips..ekpedverkfmrelgdkma.empeqgflrefan 79 
                      +v ele +ve+l ke +elk +r+ +i     +p+d     ++el  k+     e+  l++f n
       KHJ35413.1 499 RVHELEKQVEDLIKENKELKVDRNDKIIGamSNPNDQSTEKIKELEIKIEiTQTENTELQKFLN 562
                      799*********************9996422689999999999999987413455666666655 PP

>> Phage_GPO  Phage capsid scaffolding protein (GPO) serine peptidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   2.6   0.00072       1.4     180     263 ..     333     413 ..     319     424 .. 0.63
   2 ?    6.4   5.4     0.003         6     158     256 ..     461     569 ..     435     600 .. 0.77

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00072
   Phage_GPO 180 rikallskkkksddarfadveeavelvAeevkelsekveallaleaelaalkkeveklkaeleaLkekLsktda.kekqrpeatG 263
                 ++ka ls+k+++ +   + v +a ++v e++++++e+++++++    laa k++ ek+  e+e+L ++L+++   +e++r+e  G
  KHJ35413.1 333 SLKASLSGKEAEVQSLKSAVGDAEKRVGESLQQFREEQSHRQQ----LAADKEDWEKRGLEMETLLRSLQEQILlSEQNREELEG 413
                 5666677777766666677777777777777777777665555....55555555555555555555555555545555555555 PP

  == domain 2  score: 6.4 bits;  conditional E-value: 0.003
   Phage_GPO 158 avetalefeeeeeeee.geslferikallskkkksddarfadveeavelvAeevkelsekveall.........aleaelaalkkeveklkaeleaLke 246
                  ve+a+e   +e ++  + +  +++ al ++ +++ d+r++++e+ ve++ +e kel+ + +++          ++++++++l+ ++e +++e ++L++
  KHJ35413.1 461 LVEVAVENVSKELHALyKDKHEAKVAALKKSYERRWDKRVHELEKQVEDLIKENKELKVDRNDKIigamsnpndQSTEKIKELEIKIEITQTENTELQK 559
                 444444444444444356677888888888888888******************999877775556777888877888889999999999999999999 PP

   Phage_GPO 247 kLsktdakek 256
                  L+k+ a+++
  KHJ35413.1 560 FLNKERAEKE 569
                 9998887554 PP

>> FlaC_arch  Flagella accessory protein C (FlaC)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.1     0.077   1.5e+02       8      35 ..     330     357 ..     318     364 .. 0.60
   2 ?    4.6   0.1     0.021        42      11      42 ..     480     512 ..     466     513 .. 0.85
   3 ?    3.3   5.6     0.056   1.1e+02       1      42 [.     539     580 ..     539     581 .. 0.94

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.077
   FlaC_arch   8 klsklsteletvkkeneelsksveelke 35 
                 ++s+l+ +l+  ++e ++l++ v + ++
  KHJ35413.1 330 EISSLKASLSGKEAEVQSLKSAVGDAEK 357
                 4555555666666666666665555555 PP

  == domain 2  score: 4.6 bits;  conditional E-value: 0.021
   FlaC_arch  11 klsteletvkkenee.lsksveelkenVkdlls 42 
                 k++ +++ +kk+ e    k v+el+++V+dl++
  KHJ35413.1 480 KHEAKVAALKKSYERrWDKRVHELEKQVEDLIK 512
                 67778888888887526899**********996 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.056
   FlaC_arch   1 ridelEnklsklsteletvkkeneelsksveelkenVkdlls 42 
                 +i+elE k++ ++te + ++k +++ + + e+l ++V++++ 
  KHJ35413.1 539 KIKELEIKIEITQTENTELQKFLNKERAEKEKLVQTVEEMIP 580
                 89***********************************99986 PP

>> UPF0242  Uncharacterised protein family (UPF0242) N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   9.0       0.2   3.9e+02      91     168 ..     338     418 ..     318     430 .. 0.75
   2 ?   11.1  12.2   0.00016      0.31      69     158 ..     477     579 ..     457     600 .. 0.77

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.2
     UPF0242  91 leelqeeeeeLkee...ldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqellqeyqetieeqrsvlekr 168
                 l   ++e + Lk      +++  e+ +  +e+q+ +++l a +ed e+  le+e  L+  qe++  ++++ ee+   l + 
  KHJ35413.1 338 LSGKEAEVQSLKSAvgdAEKRVGESLQQFREEQSHRQQLAADKEDWEKRGLEMETLLRSLQEQILLSEQNREELEGRLAES 418
                 55555555556655333445555666777788888999999999**************99999999999988887777665 PP

  == domain 2  score: 11.1 bits;  conditional E-value: 0.00016
     UPF0242  69 kleekeaklteld........eglktkeealeelqeeeeeLkee.....ldakeeelerlkeenqqLqekleaiaedfeelkleleeqLaekqellqey 154
                 + ++ eak+ +l+        + +++ e+++e+l +e++eLk       + a+++   + +e+ ++L++k e ++ ++ el+++l+++ aek++l+q+ 
  KHJ35413.1 477 YKDKHEAKVAALKksyerrwdKRVHELEKQVEDLIKENKELKVDrndkiIGAMSNPNDQSTEKIKELEIKIEITQTENTELQKFLNKERAEKEKLVQTV 575
                 33344444444443334444488899999999999999999988889999999999999999999********************************99 PP

     UPF0242 155 qeti 158
                 +e+i
  KHJ35413.1 576 EEMI 579
                 8876 PP

>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1       1.1   2.1e+03      41      62 ..     330     351 ..     318     353 .. 0.76
   2 ?    9.2   1.4   0.00063       1.3      23      53 ..     495     518 ..     483     525 .. 0.58
   3 ?    3.5   5.0     0.037        74      26      62 ..     538     574 ..     536     576 .. 0.89

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1.1
                 HHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  41 eNksLkseleelkkevekLksk 62 
                 e +sLk  l+  + ev++Lks 
  KHJ35413.1 330 EISSLKASLSGKEAEVQSLKSA 351
                 5678899999999999999986 PP

  == domain 2  score: 9.2 bits;  conditional E-value: 0.00063
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  23 RKqaeieeLerrvkaLekeNksLkseleelk 53 
                 R  +++ eLe++v+ L keNk+L       k
  KHJ35413.1 495 RWDKRVHELEKQVEDLIKENKEL-------K 518
                 33455555555555555555555.......4 PP

  == domain 3  score: 3.5 bits;  conditional E-value: 0.037
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  26 aeieeLerrvkaLekeNksLkseleelkkevekLksk 62 
                 ++i+eLe + +  ++eN++L++ l++ + e ekL + 
  KHJ35413.1 538 EKIKELEIKIEITQTENTELQKFLNKERAEKEKLVQT 574
                 789*******************999999998888665 PP

>> PKcGMP_CC  Coiled-coil N-terminus of cGMP-dependent protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.4   0.0    0.0086        17      12      29 ..     333     350 ..     330     351 .. 0.87
   2 ?   -1.7   0.2       1.4   2.7e+03      12      22 ..     410     420 ..     408     421 .. 0.87
   3 ?    3.0   2.5     0.047        94       7      28 ..     497     518 ..     495     520 .. 0.90
   4 ?    5.8   1.7    0.0061        12       8      33 ..     538     563 ..     537     563 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.4 bits;  conditional E-value: 0.0086
   PKcGMP_CC  12 ELEkrlaekdeEIqELrs 29 
                  L + l+ k++E+q L+s
  KHJ35413.1 333 SLKASLSGKEAEVQSLKS 350
                 588899***********8 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 1.4
   PKcGMP_CC  12 ELEkrlaekde 22 
                 ELE rlae d+
  KHJ35413.1 410 ELEGRLAESDA 420
                 9******9885 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.047
   PKcGMP_CC   7 DERIRELEkrlaekdeEIqELr 28 
                 D R+ ELEk++++  +E +EL+
  KHJ35413.1 497 DKRVHELEKQVEDLIKENKELK 518
                 88**********9888888887 PP

  == domain 4  score: 5.8 bits;  conditional E-value: 0.0061
   PKcGMP_CC   8 ERIRELEkrlaekdeEIqELrskLDK 33 
                 E+I+ELE +++    E +EL   L K
  KHJ35413.1 538 EKIKELEIKIEITQTENTELQKFLNK 563
                 9**********999999999877766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (692 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1715  (0.0956551); expected 358.6 (0.02)
Passed bias filter:                      430  (0.0239835); expected 358.6 (0.02)
Passed Vit filter:                        57  (0.00317921); expected 17.9 (0.001)
Passed Fwd filter:                        20  (0.00111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.78u 0.28s 00:00:01.06 Elapsed: 00:00:00.45
# Mc/sec: 4660.03
//
Query:       KHJ35414.1  [L=725]
Description: putative neutral trehalase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.6e-191  637.6   0.0   1.9e-191  637.4   0.0    1.0  1  Trehalase        Trehalase
      5e-15   54.9   2.9    8.3e-15   54.2   2.9    1.4  1  Trehalase_Ca-bi  Neutral trehalase Ca2+ binding domain


Domain annotation for each model (and alignments):
>> Trehalase  Trehalase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  637.4   0.0  2.1e-195  1.9e-191       4     512 .]     139     699 ..     136     699 .. 0.98

  Alignments for each domain:
  == domain 1  score: 637.4 bits;  conditional E-value: 2.1e-195
                 TSTCCCCCGCCTS-..HHHHHHHHHCHHCCHHEE..TTTTHHHHHHHHCE-SGGGS.EE.E-TT-HHHHHHHHHHH.CTGGHH.EECCHHCCTTC.CCC CS
   Trehalase   4 gdkktfvDearlse..vdrllrlikaslekaltrridkedlkkfvedtfeetgseleri.vpkdekeqpeyflkka.edeelrleaeelnklwka.lvr 97 
                 +++++f+De rl+e  v+rl+rli+++++++ltr id++ ++ + +d +++t+++++ri vp  ++eq+ey++k++ +++e+ l++  l+k++++ lvr
  KHJ35414.1 139 DKRHIFLDELRLNEnpVNRLTRLITEEFWRNLTRVIDGSAIQVAGHDPKNWTDDPRPRIyVPAGAPEQYEYYSKISrDRPEICLDVCLLPKKITPeLVR 237
                 56789***********************************************************************99****************99*** PP

                 HTTTS-SCE-TTECEEE-TT.........-EE-SBTTB-S-BCCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHSS--SBSBGGGTT---S--HHHH CS
   Trehalase  98 kikkkvgllpeassllplpk.........pfvVPGgRFrElYyWDsYfvilGLleskkvdlakgmvenfiyliekYGkilNgnRsYYlsRSQPPlltdm 187
                 ++++k+gll+ a++  +++          pfvVPGgRF+E+Y+WDsY+++lGL++ +k++lak+mv+nfi++i++YGkilN++RsYYl+RSQPP+ltdm
  KHJ35414.1 238 DMNHKPGLLAVAMEPAVDHTtglttlrgvPFVVPGGRFNEFYGWDSYMESLGLIACDKTHLAKAMVKNFIFCIKHYGKILNATRSYYLCRSQPPFLTDM 336
                 ****************99999****************************************************************************** PP

                 HHHHHHHC.....HCCHHHHHHHHHHHHHHHCCTTTCCETTCCC-CTC-EEE--SSSTTS-TCCCHHHHHHHHHCTT...HCCHHHHHCCCCHHHHHCC CS
   Trehalase 188 vlrvyekt.....eddallravlaalkkeyefwmaeqrldevtklskryllnrygvpeetprpesyledketaeklk...kerkkeevyrelkaaaesg 278
                 +lrv+ek+     + + l++a+laa+k++y++w+ae+r d++t+ls ry+++++gvp+et++++++++++++a+k++   k++ k+++y+e++++++++
  KHJ35414.1 337 ALRVFEKIrhedgALQLLREAILAAIKEYYSVWIAEPRFDKKTGLS-RYRPEGLGVPPETEASHFTHILEPYAKKYElslKDFIKAYNYGEINEPELDE 434
                 **********9999999*****************************.**************************************************** PP

                 HHCHHHHCCCCTT-S.TCCCCTGGGEE-HHHHHHHHHHHHHHH.....HCCCHCC-.............CCHHHHHHHHHHHHHHHHHHHCEETTTTEE CS
   Trehalase 279 wdlssRwlresghdtgellelrtaklvpvDLNallyklekdia.....efedklgd.............setseefeekaekrkkaidkvLWneeagvy 359
                 ++l++R++resghdt+++le+++a+l+++DLN+llyk+ekdia     +f dkl+              +ets+ +e++a++rk+aid++LWnee+g++
  KHJ35414.1 435 YFLHDRAVRESGHDTSYRLENVCANLATIDLNSLLYKYEKDIAavirtYFGDKLEIpvdfqspnmdsnyIETSSSWERRAKHRKAAIDRYLWNEEKGIF 533
                 *******************************************9888888888888999**************************************** PP

                 --EETTTTEE----BGGGGHHHHCT-S-HHHHHHHHHHCHHHHCCCCCEES..CCCC-SBSSS.-SSTTSTTEEEHHHHHHHHHHHHHTT-HHHHHHHH CS
   Trehalase 360 lDYdlkkkkqtnyesatnlvpLwaglaskeqaaklvakvlekleesgllva..egglgtsllk.sgrQWDyPngWaPlqilaveglerygeeelaerla 455
                 +DYd+ k++q+nye++t++++Lwag+as++qa k+v+ +l+ +e  g+lv+  e+++g+++l  ++rQWDyP+gWaP+qila+ gl+ryg+  +aerla
  KHJ35414.1 534 FDYDTVKEEQSNYETCTTFWALWAGVASPQQAVKIVTFALPLFEVVGGLVSgtERSRGAISLArPNRQWDYPFGWAPQQILAWVGLQRYGYFAEAERLA 632
                 ***************************************************99********999*********************************** PP

                 HHHHHHHHHHHHHC.TSEBSCEETTS.......TSTTB..TT-SSSSTTCSBHHHHHHHHHHHCCH. CS
   Trehalase 456 erwlktvtkafsde.gklvEKYdvtr.......eaeyg..GgggeyvlqeGFGWvNgvvlelLellg 512
                 ++wl+++tkaf+d+ g++vEKYdvtr       + eyg  G ++e+v++eGFGWvN++++++L+ ++
  KHJ35414.1 633 YKWLFMMTKAFVDFnGVVVEKYDVTRtfdphrvDVEYGnqGSDFEGVAKEGFGWVNASYVYGLSIVN 699
                 *********************************9999999***********************9875 PP

>> Trehalase_Ca-bi  Neutral trehalase Ca2+ binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.2   2.9   9.2e-19   8.3e-15       1      30 []      79     108 ..      79     108 .. 0.97

  Alignments for each domain:
  == domain 1  score: 54.2 bits;  conditional E-value: 9.2e-19
  Trehalase_Ca-bi   1 LeqLLeqEDTDgnfQITIeDkGPKvlsLGT 30 
                      +++L  qEDTD n+QITIeD+GPK++sLGT
       KHJ35414.1  79 IQNLTDQEDTDYNMQITIEDNGPKTISLGT 108
                      689**************************9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (725 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       399  (0.0222544); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.61u 0.26s 00:00:00.87 Elapsed: 00:00:00.41
# Mc/sec: 5290.07
//
Query:       KHJ35415.1  [L=850]
Description: putative vacuolar fusion protein ccz1 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-17   61.2   5.3    3.3e-14   52.3   0.3    2.9  2  DUF1712   Fungal domain of unknown function (DUF1712)
  ------ inclusion threshold ------
       0.25   11.6   1.8       0.28   11.5   0.0    2.0  2  PcfK      PcfK-like protein


Domain annotation for each model (and alignments):
>> DUF1712  Fungal domain of unknown function (DUF1712)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.3   0.3   3.7e-18   3.3e-14       2     141 ..      20     199 ..      19     212 .. 0.79
   2 !    9.6   0.8   3.2e-05      0.28     355     450 ..     566     660 ..     464     672 .. 0.82

  Alignments for each domain:
  == domain 1  score: 52.3 bits;  conditional E-value: 3.7e-18
     DUF1712   2 vvFnpskgqkEgdelkklLlyhpf...................teeeislneklskiGlieaiitFtetFsnedtcevieteketiifyevEpdfwlvL 81 
                 +++np  g  ++++++++++y+                     ++ + +++e+l++iGl ++ii+F ++Fs +++ + ietek++ii++e Ep++w+  
  KHJ35415.1  20 AIYNPLLGIADESVHNQIIYYYTShtleddespeatdkqskenDNLKQQTDEQLRQIGLAQGIIEFGKNFSGGKPVKTIETEKSRIILHEIEPSWWILA 118
                 799999***************9888888766666654444322223456899**********************************************9 PP

     DUF1712  82 vvenpk.eqknkeikeqi...................ysavLkqcYqfFklfnGs.fsslae...erekLtdllneflvkfwqd 141
                 +++ +      k + ++                    ++  L   +++F l++ s + +l     +r+k +  l  + + +++ 
  KHJ35415.1 119 SINLTIlPC--KSGTNTHpeqeesieycsrdvkpaelLETDLIRAHSTFLLHHSSsIGKL-FietKRSKFQRILSRYWDAYITR 199
                 999655433..3233333446799999************************996413333.13578888888888888888765 PP

  == domain 2  score: 9.6 bits;  conditional E-value: 3.2e-05
     DUF1712 355 kfntdekkeylnllfykakdvltvllldpafekiweqdylkeLdaklleqlsllaesieeelskeknsekkkksesfaYlifdkktkkirssiprk 450
                  ++ ++k e++++++y  k ++  +l++ +   i +++++++L+ ++ + ++ l +  ++   k +     +++     li d++++ i s+ip  
  KHJ35415.1 566 DIQHNKKIESHQVVIYASKPFIFTFLFKSDITDIASPNFYRNLHHQIQQIVKPLLSFTKYRALKPEIV-TDSSEAPIFNLIWDPQNLTISSTIPNI 660
                 456678888899*************************************9999999977887777764.4555555556899***********984 PP

>> PcfK  PcfK-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   3.1e-05      0.28      55     101 ..      26      75 ..      13     104 .. 0.83
   2 ?   -2.6   0.7      0.68   6.1e+03      68      96 ..     454     482 ..     452     565 .. 0.51

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 3.1e-05
        PcfK  55 aavsddevyewaveYfeeddievtk...eeekaekradavskkqkekkka 101
                  +++d+ v ++++ Y++  ++e ++   + +k+ k++d+++++++e+ ++
  KHJ35415.1  26 LGIADESVHNQIIYYYTSHTLEDDEspeATDKQSKENDNLKQQTDEQLRQ 75 
                 589*****************988888877788999999999988887776 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.68
        PcfK  68 eYfeeddievtkeeekaekradavskkqk 96 
                 eYf+ ++i  +  + k ++ + ++s++++
  KHJ35415.1 454 EYFKAKEITSSLYDFKSQESYSSLSTASN 482
                 56666666555433333333333333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (850 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       799  (0.0445647); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.28s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 5838.08
//
Query:       KHJ35416.1  [L=452]
Description: putative isocitrate lyase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   1.8e-250  831.9   0.7   2.1e-250  831.7   0.7    1.0  1  ICL         Isocitrate lyase family
    5.2e-12   45.7   0.1      8e-11   41.8   0.0    2.2  2  PEP_mutase  Phosphoenolpyruvate phosphomutase
  ------ inclusion threshold ------
       0.15   11.7   0.0       0.22   11.1   0.0    1.2  1  DUF4249     Domain of unknown function (DUF4249)


Domain annotation for each model (and alignments):
>> ICL  Isocitrate lyase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  831.7   0.7  3.5e-254  2.1e-250      74     526 .]       1     451 [.       1     451 [. 0.99

  Alignments for each domain:
  == domain 1  score: 831.7 bits;  conditional E-value: 3.5e-254
                 HHHH-S-EEE-HHHHHHH--TT----SS-S-S-TTHHHHHHHHHHHHHHHHHHHHHHHHHSS-HH.HHTTS--------EEEE-TT-SSSHHHHHHHHH CS
         ICL  74 makyldtiyvsGwqssstastsnepspdladypmdtvpnkvehlflaqlfhdrkqkeerlkvkke.ereklanvdylrpiiadadtGhGGltavvkltk 171
                 makyldt+yvsGwqssstas+s+ep+pdladyp++tvpnkv hlf+aqlfhdrkq+eerl++k+  +r+kl+n+dylrpiiadadtGhGGltav+kltk
  KHJ35416.1   1 MAKYLDTVYVSGWQSSSTASASDEPGPDLADYPYTTVPNKVGHLFMAQLFHDRKQREERLSIKSRvDRQKLPNIDYLRPIIADADTGHGGLTAVMKLTK 99 
                 9************************************************************98652799****************************** PP

                 HHHHTT-SEEEE-SB-TT---------EEE--HHHHHHHHHHHHHHHHHTT---EEEEE--GGGEEEES-TT-GGGGGGEEEE--TTS--HHHHHHHHH CS
         ICL 172 lfierGaaGihiedqasgtkkcGhmaGkvlvpiqehinrlvairaqadilgsdllvvartdseaatlitstidtrdhafilGatnpdleeladllveae 270
                 lfie+GaaGihiedqa+gtkkcGhmaGkvlvpi+ehinrlvairaqadi+gsdll++ar d+eaatlitstid rdha+ilG+tn ++++l+dl+ +ae
  KHJ35416.1 100 LFIEKGAAGIHIEDQAAGTKKCGHMAGKVLVPISEHINRLVAIRAQADIMGSDLLAIARIDAEAATLITSTIDPRDHAYILGSTNSKIQPLNDLMLAAE 198
                 *************************************************************************************************** PP

                 HS---SHHHHHHHHHHHHHS-EE-SHHHHHHHHHTSS-S-HHHHHHHHHHHHTT--HH...HHHHHHHHHHSS----BTTSS--TT--EEE--SHHHHH CS
         ICL 271 aeGksGaelqaiedewlkkaglklfeeavvdeieksklsnkkelikkftkkvkplselsnkearklakellgkdiffdwelprvreGyyrykGgtqcsv 369
                  + ksG elqaied+w+ kaglk+f+eavv+ i +s +  k el ++f ++vk +   snkear++ak+++g di++dwe+pr+reGyyr++Gg++ ++
  KHJ35416.1 199 RASKSGPELQAIEDDWIIKAGLKTFNEAVVEFIFASIHVTKDELTARFLENVKGK---SNKEARAIAKDITGVDIYWDWESPRTREGYYRLRGGCDNAI 294
                 ****************************************************965...678************************************** PP

                 HHHHHHTTS-SEEE---SS--HHHHHHHHHHHHTT-TT-EEEEE--SSS-GGGTS-HHHHHSHHHHHHHTTEEEEEETTHHHHHHHHHHHHHHHHHHHH CS
         ICL 370 vravafapyadliwmesklpdyaqakefaeGvkakvpeqklaynlspsfnwkkamsadeqetyikrlaklGyvwqfitlaGlhtnalisdkfakdyakr 468
                 +ra+a+apyad++wmesklpd+aqa+efa+Gv+a++pe+klaynlspsfnwk+am+++eqetyi+rl+klGy+wqfitlaGlh++alisd+fa++y k+
  KHJ35416.1 295 NRAIAYAPYADAVWMESKLPDFAQAEEFANGVHAVFPEKKLAYNLSPSFNWKTAMTREEQETYIQRLTKLGYCWQFITLAGLHSTALISDQFARAYKKQ 393
                 *************************************************************************************************** PP

                 THHHHHHHTHHHHHHHT-GGGSHHHHHTHHHHHHHHHHHH--XXXXXXXXXXXXXXXX CS
         ICL 469 GmkaygeevqeeeidnGvdvvkhqkwsGaeyidellklvtGGvsstaamGkGvtedqf 526
                 Gm+ayge +qe+e++n +dvvkhqkwsGa+yidellk+v+GG sst amGkGvtedqf
  KHJ35416.1 394 GMRAYGELIQEPEMENDIDVVKHQKWSGANYIDELLKMVQGGTSSTIAMGKGVTEDQF 451
                 *********************************************************9 PP

>> PEP_mutase  Phosphoenolpyruvate phosphomutase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.8   0.0   1.3e-14     8e-11      70     147 ..      78     162 ..       8     179 .. 0.83
   2 ?    1.6   0.0     0.026   1.5e+02     151     179 ..     286     313 ..     276     365 .. 0.77

  Alignments for each domain:
  == domain 1  score: 41.8 bits;  conditional E-value: 1.3e-14
  PEP_mutase  70 lPlivDledGygespeevaetvrrliaaGvvgvniEDk.....kknd.aerqlldieefaekiaaaraaaeeag..fvinARtdal 147
                  P+i+D+++G+g     v +  + +i+ G++g++iED+     k++  a++ l++i e+ +++ a+ra+a+  g  ++ +AR+da 
  KHJ35416.1  78 RPIIADADTGHGG-LTAVMKLTKLFIEKGAAGIHIEDQaagtkKCGHmAGKVLVPISEHINRLVAIRAQADIMGsdLLAIARIDAE 162
                 7**********99.999*********************9986544455888888*****************99999********93 PP

  == domain 2  score: 1.6 bits;  conditional E-value: 0.026
  PEP_mutase 151 agagleeaieRaraYaeAGAdgvfvpglq 179
                  ++g+++ai+Ra aYa   Ad+v + ++ 
  KHJ35416.1 286 LRGGCDNAINRAIAYAPY-ADAVWMESKL 313
                 56789**********865.6666666654 PP

>> DUF4249  Domain of unknown function (DUF4249)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   3.7e-05      0.22     126     200 ..     248     335 ..     230     374 .. 0.69

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 3.7e-05
     DUF4249 126 dtvsaeestedne.....egyeitvdlkDppneenYYrw.....ssielcy..etefskvlnlast.psrsddsdsefldtelsgdkl 200
                 ++v++++++e +      +g+ i++d++ p+  e YYr+     + i++     ++ + v + ++  +  + +++ + +++ + ++kl
  KHJ35416.1 248 ENVKGKSNKEARAiakdiTGVDIYWDWESPRTREGYYRLrggcdNAINRAIayAPYADAVWMESKLpDFAQAEEFANGVHAVFPEKKL 335
                 6677777666666888888********************9998844444433357666677766666666667777777777777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (452 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       396  (0.0220871); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.51u 0.25s 00:00:00.76 Elapsed: 00:00:00.41
# Mc/sec: 3289.15
//
Query:       KHJ35417.1  [L=133]
Description: hypothetical protein EV44_g3766 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.41u 0.22s 00:00:00.63 Elapsed: 00:00:00.39
# Mc/sec: 1023.21
//
Query:       KHJ35418.1  [L=141]
Description: putative histone h2a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-18   67.6   0.0    1.6e-18   67.3   0.0    1.1  1  Histone        Core histone H2A/H2B/H3/H4
    1.8e-12   46.8   0.0    3.8e-12   45.7   0.0    1.6  1  Histone_H2A_C  C-terminus of histone H2A
      6e-05   23.2   0.6    9.3e-05   22.6   0.0    1.6  2  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a


Domain annotation for each model (and alignments):
>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.3   0.0   2.7e-22   1.6e-18      32     131 .]       4     103 ..       1     103 [. 0.92

  Alignments for each domain:
  == domain 1  score: 67.3 bits;  conditional E-value: 2.7e-22
                 SSSB--TTT-XTTHHHHHHHHHHHHXXSXXSXHHHHHHHHHHHH.TTSSSXEEXHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHHHH CS
     Histone  32 kskkkkkrryrpgtvalkeirkyqkstdlliqklpfaRvvreivksekedlrisaeavlalqealEallvelfeeAnllakhaKRvTitpkDiqlArrl 130
                 ++ k++  + + g++  +e +k+q+++ + +  +p  Rv r +++++++++r+ a+a ++++++lE+l++e++e+A+++ak+ K ++itp+++qlA+r+
  KHJ35418.1   4 SKGKSSGGKNAGGKASSDEVKKQQSHSSKAGLIFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAILEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRG 102
                 55556666677789999*********************************************************************************7 PP

                 T CS
     Histone 131 r 131
                 +
  KHJ35418.1 103 D 103
                 5 PP

>> Histone_H2A_C  C-terminus of histone H2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.7   0.0   6.3e-16   3.8e-12       1      35 []     104     137 ..     104     137 .. 0.97

  Alignments for each domain:
  == domain 1  score: 45.7 bits;  conditional E-value: 6.3e-16
  Histone_H2A_C   1 EELnkLLggVTIAqGGVLPnIhkvLLpkktkkkkk 35 
                    EEL++L++ +TIA GGVLP+I+ +LL k ++kk k
     KHJ35418.1 104 EELDTLIR-ATIAFGGVLPHINRALLLKVEQKKRK 137
                    9*******.**********************9976 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.0   1.6e-08   9.3e-05       3      65 .]      37     100 ..      35     100 .. 0.96
   2 ?   -2.6   0.1       1.2   7.1e+03      48      55 ..     131     138 ..     128     138 .. 0.84

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 1.6e-08
                    XXHHHHHHHHHCC.TTXS-B-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHHH CS
  CBFD_NFYB_HMF   3 LPiarvkkImksd.pdarkiakdAkeliaecveefieelaseAaeickkekrKtikaehiklAv 65 
                    +P  rvk+ +k+  ++  ++   A ++++ ++e    e+++ A   +k+ k K i++ h++lA+
     KHJ35418.1  37 FPCGRVKRFLKNNtQNKMRVGAKAAVYVTAILEYLTAEVLELAGNAAKDLKVKRITPRHLQLAI 100
                    8************888888*******************************************97 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 1.2
                    HCCTTSSC CS
  CBFD_NFYB_HMF  48 ckkekrKt 55 
                    ++++krKt
     KHJ35418.1 131 VEQKKRKT 138
                    68999998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (141 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       477  (0.0266049); expected 358.6 (0.02)
Passed bias filter:                      340  (0.0189637); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.42
# Mc/sec: 1007.04
//
Query:       KHJ35419.1  [L=168]
Description: hypothetical protein EV44_g2941 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      0.004   17.6   0.6         10    6.6   0.2    3.2  2  KIF1B     Kinesin protein 1B


Domain annotation for each model (and alignments):
>> KIF1B  Kinesin protein 1B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.6   0.2   0.00058        10      34      40 ..      55      75 ..      28     104 .. 0.51
   2 !    5.5   0.0    0.0013        24      27      40 ..     110     123 ..      97     128 .. 0.62

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.00058
       KIF1B 34 s..............DPFyEs 40
                               DPF E 
  KHJ35419.1 55 YknpdevlqvnhpniDPFLEE 75
                144444555555555444443 PP

  == domain 2  score: 5.5 bits;  conditional E-value: 0.0013
       KIF1B  27 tseslsgsDPFyEs 40 
                 +s+sl++ DPF Es
  KHJ35419.1 110 QSQSLQQIDPFLES 123
                 24445555*****9 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (168 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       440  (0.0245412); expected 358.6 (0.02)
Passed bias filter:                      392  (0.021864); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1297.03
//
Query:       KHJ35420.1  [L=161]
Description: putative 40s ribosomal protein s11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-33  113.6   0.3    6.7e-33  112.9   0.3    1.4  1  Ribosomal_S17_N  Ribosomal_S17 N-terminal
    1.8e-26   92.0   0.2    3.8e-26   91.0   0.2    1.6  1  Ribosomal_S17    Ribosomal protein S17


Domain annotation for each model (and alignments):
>> Ribosomal_S17_N  Ribosomal_S17 N-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.9   0.3   7.5e-37   6.7e-33       1      69 []       8      76 ..       8      76 .. 0.92

  Alignments for each domain:
  == domain 1  score: 112.9 bits;  conditional E-value: 7.5e-37
                     --SSS----SS--------------....--------TT----GGGGS-----TTSSSSSS----S-EE CS
  Ribosomal_S17_N  1 qterafqkQetvflnkkkskeekkkkkkkkryvknvglgfktPkeAiegtYiDkKCPFtGnvsirGriL 69
                     q+erafqkQ+++fln+k ++++ k  k  +r++k+vglgf+tPk+AiegtYiDkKCPFtG +sirGriL
       KHJ35420.1  8 QSERAFQKQPHIFLNSKVKTKSVKPGKGGRRWYKDVGLGFRTPKTAIEGTYIDKKCPFTGLISIRGRIL 76
                     89***************666666666656***************************************8 PP

>> Ribosomal_S17  Ribosomal protein S17
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.0   0.2   4.2e-30   3.8e-26       1      67 [.      78     145 ..      78     146 .. 0.98

  Alignments for each domain:
  == domain 1  score: 91.0 bits;  conditional E-value: 4.2e-30
                    EEEEE--STTEEEEEEEEEEEETTTTEEEEEEEEEEEE-TTTS.--TT-EEEEEEECECSSSEEEEEE CS
  Ribosomal_S17   1 GvVvsdkmdkTvvVrverlvkhpkykkyvkrrkkylahdenns.vkvGDiVrieecrPlSktkrfvvv 67 
                    G+Vvs+km++T +Vr+e+l+ +pky +y++r+k++ ah ++ + v++GD V++++crPlSkt+rf+v+
     KHJ35420.1  78 GTVVSTKMHRTLIVRREYLHFIPKYARYERRHKNLAAHVSPAFrVEEGDQVTVGQCRPLSKTVRFNVL 145
                    99****************************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (161 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       380  (0.0211947); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.36
# Mc/sec: 1357.54
//
Query:       KHJ35421.1  [L=603]
Description: putative tyrosyl-trna mitochondrial precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.1e-73  245.5   0.0    9.8e-73  245.0   0.0    1.1  1  tRNA-synt_1b  tRNA synthetases class I (W and Y)
    8.3e-39  132.1   0.0    2.2e-38  130.8   0.0    1.7  2  TyrRSs_C      Tyrosyl-tRNA synthetase C-terminal domain
  ------ inclusion threshold ------
      0.085   12.6   0.0       0.19   11.4   0.0    1.6  1  S4            S4 domain


Domain annotation for each model (and alignments):
>> tRNA-synt_1b  tRNA synthetases class I (W and Y)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  245.0   0.0   1.6e-76   9.8e-73       4     293 .]      94     415 ..      92     415 .. 0.98

  Alignments for each domain:
  == domain 1  score: 245.0 bits;  conditional E-value: 1.6e-76
                   S--EEEEEEETSSS.-BGGGHHHHHHHHHHHHTTSEEEEEEEHHHHHTTTTT.-SSHHHHHHHHHHHHHH..HHHHHHHTCHTTT............ CS
  tRNA-synt_1b   4 rplrvysGidPTgk.lHlGylvplkklvelqkaghevffliaDlhAiigdps.kaeerklrkreevlena..ikaqlakgldpek............ 84 
                   r++ vy+G+dPT+  lH+G+lvpl+ l++++ +g++++ l+++++A++gdp+ + ++rk +k + +++n+  ++ ql++++ + +            
    KHJ35421.1  94 RRVGVYVGVDPTAAsLHIGNLVPLMALFWMYLEGYHTVSLLGGATAKVGDPTdRLSSRKKEKPAVRAANMtsMHLQLKRLWVNVEasgrkygftrtw 190
                   6889*****************************************************************99*********888888*********** PP

                   ...EEEEETHHHHTTHHHHHHHHHHHTTCBHHHHHHHHHCCHHCSSSC--BHHHHHHHHHHHHHHHHTCHS....EEEEEGGGHHHHHHHHHHHHHH CS
  tRNA-synt_1b  85 ...aevvlqsewlehlelaellrdlgklgslnrmlqfksvkkrleegegislgeftYplLqaaDilllkad....lvpgGsDQkqnielgrdlarrf 174
                      +e+v++s+w+++++++e+l+ lg+ ++l +ml++++vk+++++g+g+s++ef+Yp+Lqa+D++++       l++gGsDQ +ni  g+d ++ +
    KHJ35421.1 191 anhRELVNNSTWWNKTSILEVLQILGPGMRLGTMLARETVKQKMRKGDGMSYAEFSYPILQAWDWWYMFHSkgiqLQLGGSDQFGNILTGIDAIKYI 287
                   *9999*****************************************99********************9999************************9 PP

                   HHH..........STTSS-EEEEET-BBSTTSSSBTTCETTCGC-BTTCCHHHHHHHHHHCHCSTTCSHHHHHHHHHTHHHCHHHHHHHHCCSEE.E CS
  tRNA-synt_1b 175 nkk..........evfkkpegltvplltgldGekKmSKSagnsaIfLddekesvkkkiqkavtdsdeevekllklktelsnelierleavsgkkp.k 260
                     +          +   +p gltvpl t ++Ge K++K+agn aI+Ld +  s  ++++++++ sd +v+k+lk++t+++  +ie l  ++ k+p k
    KHJ35421.1 288 LAThpdpdfrskaKHVGEPLGLTVPLFTTSSGE-KFGKTAGN-AIWLDSDLMSSFDLYGYFLRVSDMDVKKYLKMFTFIPLPEIESLVDEHFKEPpK 382
                   999999*****99999*****************.********.****************************************************** PP

                   SSHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH CS
  tRNA-synt_1b 261 reaeellaeevtklvhggdlkkalaealnelle 293
                   r a++ la+e ++lvhg +l+++++e++n l++
    KHJ35421.1 383 RLAQHRLAQEFVELVHGFQLANEAKEQHNLLFQ 415
                   *****************************9996 PP

>> TyrRSs_C  Tyrosyl-tRNA synthetase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0       2.2   1.3e+04      45      55 ..      95     105 ..      90     112 .. 0.76
   2 !  130.8   0.0   3.6e-42   2.2e-38       1     119 [.     438     557 ..     438     558 .. 0.95

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 2.2
                 HT-EEEEE--S CS
    TyrRSs_C  45 kkgayvgsrpg 55 
                 + g+yvg+ p+
  KHJ35421.1  95 RVGVYVGVDPT 105
                 569****9987 PP

  == domain 2  score: 130.8 bits;  conditional E-value: 3.6e-42
                 -TTTSTT-EEEE--GGGGGS-SHHHHHHHTTS-STHHHHHHHHHHT-EEEEE--S---SSS-SSS--------S.HHHHHHHTT-SS-EEEEESSS-EE CS
    TyrRSs_C   1 ttlanapkvdvkLPksLvlnksiariLyaaGLasskseghrliakkgayvgsrpgkkkgekedelsftpiktwk.peetkkflidgklLiLrkGkwkvr 98 
                 tt++n+pkv++kLP+sL+++++++++++aaG+ass seg+rl++++g+y+g++p+++++ ++++++++++++   +   +k+l +g+l+iLrkGk++vr
  KHJ35421.1 438 TTVNNRPKVNLKLPESLIYQRMFGKVVFAAGFASSLSEGRRLLNASGIYIGTMPDRSTNFDSGHVTWSKVEADSeAPYLRKYLANGELIILRKGKHNVR 536
                 5789******************************************************************976515678******************** PP

                 EEE---HHHHHHHTTTSHHHH CS
    TyrRSs_C  99 iieivsDeefeasgltapgee 119
                 ii+i+sDeef ++gl++pg++
  KHJ35421.1 537 IIQIISDEEFVKAGLKYPGMS 557
                 *******************86 PP

>> S4  S4 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   3.3e-05      0.19       5      30 ..     462     487 ..     462     489 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 3.3e-05
                 HHHHHTTSSSSHHHHHHHHHTTTEEE CS
          S4   5 kvlarlglassrreArqlIehGrVlV 30 
                 kv++++g+ass +e r+l ++ ++++
  KHJ35421.1 462 KVVFAAGFASSLSEGRRLLNASGIYI 487
                 7999****************999988 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (603 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       497  (0.0277205); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.22s 00:00:00.78 Elapsed: 00:00:00.39
# Mc/sec: 4607.15
//
Query:       KHJ35422.1  [L=1201]
Description: putative dna mismatch repair protein msh6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-68  230.5   1.3    3.1e-68  229.5   1.3    1.5  1  MutS_V    MutS domain V
    4.3e-39  134.7   0.1    2.1e-38  132.5   0.0    2.1  2  MutS_III  MutS domain III
    1.9e-31  108.6   0.2    6.2e-31  107.0   0.1    2.0  2  MutS_I    MutS domain I
    1.7e-12   47.5   0.4    3.9e-11   43.1   1.2    2.6  2  MutS_IV   MutS family domain IV
    6.3e-12   45.9   2.2    1.1e-11   45.2   0.0    2.6  3  MutS_II   MutS domain II
  ------ inclusion threshold ------
      0.011   16.2   0.2      0.011   16.2   0.2    3.6  3  AAA_23    AAA domain
      0.042   13.6   1.6       0.11   12.3   0.1    2.2  2  AAA_29    P-loop containing region of AAA domain
       0.59   10.4   5.2        1.4    9.2   5.2    1.6  1  DUF4611   Domain of unknown function (DUF4611)
        9.6    5.9  10.0       0.11   12.3   0.2    2.4  2  AAA_21    AAA domain, putative AbiEii toxin, Type IV TA syste


Domain annotation for each model (and alignments):
>> MutS_V  MutS domain V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  229.5   1.3   1.5e-71   3.1e-68       2     186 ..     959    1145 ..     958    1147 .. 0.96

  Alignments for each domain:
  == domain 1  score: 229.5 bits;  conditional E-value: 1.5e-71
                  EEE-STTSSHHHHHHHHHHHHHHHHHT--BSSSEEEEE--SEEEEEE--------SS-HHHHHHHHHHHHHTT--TTSEEEEESTS-SS-HHHHHHH CS
      MutS_V    2 litGpnmaGkstylrqvalivllaqiGsfvpaekaeisivdkiftRvgasDdlakgkstFmvEmlEtasilknatekslvilDElGRGtstydGlai 98  
                  l+tG+n aGkst lr ++++v++aqiG++vpa +a+i++vd+i++R+ga+D++  ++stF vE+ Et++il++at++slvilDElGRGts+ydG+a+
  KHJ35422.1  959 LLTGANAAGKSTILRMTCIAVIMAQIGCYVPAVSATITPVDRIMSRLGANDNIFAAQSTFFVELYETKKILSEATTRSLVILDELGRGTSSYDGVAV 1055
                  79*********************************************************************************************** PP

                  HHHHHHHHHHTT--EEEEEES-GGGGGHHHHSTTEE..EEEEEEEEETTEEEEEEEEEES--SS--HHHHHHHTT--HHHHHHHHHHHHH CS
      MutS_V   99 alavaeyllekikaktlfatHyheltklaekleevk..nlhlavkeeeedivflykvkegaaeksyGikvaklaglPesvverArevlke 186 
                  a++v+++++++i +  +fatHyh+l+   ++++e+   +++++v+e++++i+flyk+++g+ae+s+G++ a++ g+P+++++rA+ ++ke
  KHJ35422.1 1056 AQSVLHHIATHIGCIGFFATHYHSLAIEFATHPEIVakRMQIHVDEQNRHITFLYKLEDGVAESSFGMHCAAMCGIPNQIIDRAEVAAKE 1145
                  **************************9999999976236777788***************************************988776 PP

>> MutS_III  MutS domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.0      0.64   1.3e+03     113     113 ..     149     149 ..      18     502 .. 0.64
   2 !  132.5   0.0     1e-41   2.1e-38       1     191 []     612     903 ..     612     903 .. 0.70

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.64
                 T CS
                 x RF
    MutS_III 113 l 113
                 +
  KHJ35422.1 149 T 149
                 1 PP

  == domain 2  score: 132.5 bits;  conditional E-value: 1e-41
                 HHHHHTTSSS-TTS.SSSS-HHHHH---SSHHHHHHHHHHHH--BS-HHHHHHHHHHHHH.T..TT.HHHHHHHHTT---HHHHHHHHHTT---HHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    MutS_III   1 aTlrnLeilenlrggskegsLlgvldrTvTamGaRlLrewllqPltdleeInaRldaVee.leneelreelrellrrlpDleRllsrislgkakardlk 98 
                 +Tl nLe+++n+++g+++g+L+++++++vT++G+Rl+r+w+++Pl d ++In+RldaVe   ++++l++ ++e +  lpDleRl+sri++g+++++d+ 
  KHJ35422.1 612 KTLVNLEVFTNTSDGTSNGTLFNLINKCVTPFGKRLFRQWVCHPLADASKINERLDAVEMiNKDRTLSDHFTECMFGLPDLERLISRIHAGSCRPEDFV 710
                 59******999888899*******************************************77799999999999999********************55 PP

                 H........................HHHHHHHHHTTTTT---SSTHHHHH...........HHHHHHHHHHB-SS--SSGGGS--B-T........... CS
                 x........................xxxxxxxxxxxxxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxx........... RF
    MutS_III  99 a........................llealkaleelvallekeklaesee...........eslaelleeaideeplalekegedlra........... 151
                 +                        +++ l+a+++++  l  + +a +++           +          +ee+ ++++e+ ++ +           
  KHJ35422.1 711 KvvtafgqigytidllesykngegcIARLLRAIPKTKSKLDWWLAAFDHSkakehkilvpsK---------GVEEEFDKSQEQIFEIEkllakllkkkq 800
                 51222333333333222333333333444444444444444333332222443333333330.........3333333333333333355556666666 PP

                 ...........................................................HHHHHHHHHHHHHHHH.HHT.......HHHHHHHHHHHHH CS
                 ...........................................................xxxxxxxxxxxxxxxx.xxx.......xxxxxxxxxxxxx RF
    MutS_III 152 ...........................................................iealeqelfqelleev.eea.......lerlrrlaealae 183
                                                                            +    qe   +++++v  +         + ++++++++a+
  KHJ35422.1 801 edfgsasqiayknvgkeiyqlevpasikvpkdwqmmssagkykryyfaelrqlirqlqeA----QETHGQIVKQVaLKFyarfdldYKLWQQVIKIVAQ 895
                 67777777888889999999*********************************9966431....44444444444222134455558************ PP

                 HHHHHHHH CS
                 xxxxxxxx RF
    MutS_III 184 LDvllSlA 191
                 +D+l++lA
  KHJ35422.1 896 IDCLIGLA 903
                 ******99 PP

>> MutS_I  MutS domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.0   0.1   3.1e-34   6.2e-31       2     112 ..     315     435 ..     314     436 .. 0.95
   2 ?   -3.1   0.0       4.6   9.1e+03      55      67 ..    1124    1137 ..    1116    1139 .. 0.75

  Alignments for each domain:
  == domain 1  score: 107.0 bits;  conditional E-value: 3.1e-34
                 HHHHHHHCCCHH-TTCEEEEEETTEEEEECHHHHHHHHHCSSSSTT.ESSSSC.EEEEEEEHHHHHHHHHHHHHTT-EEEEEEE-S-HHHH........ CS
      MutS_I   2 plmkqylelkkkykdavlffrvGdfYelfgeDAviaareleitltkrkkssekeipmagvPehalekylrkLvekgykVavveqtetpaek........ 92 
                 +++ qy+++k+k  d+v+ff++G+fYel+++DA+i++++++++lt    ++ + ++m+gvPe++l++++ ++v+kg+k+a+v+q e++  k        
  KHJ35422.1 315 AFEHQYWKIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLT----DRVN-MRMVGVPESSLNHWATQFVAKGFKIARVDQCESALGKemreaesg 408
                 5899*****************************************....6677.*********************************999999****** PP

                 .......S.S--EEEEEEEBTTC-TTS CS
      MutS_I  93 .......kgvvkrevvrviTpGtltde 112
                        ++++kre++ v+T Gtl++e
  KHJ35422.1 409 nkakkpaDKIIKRELACVLTSGTLVEE 435
                 *99888746***************987 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 4.6
                  ..EEEEEEEHHHHH CS
      MutS_I   55 e.ipmagvPehale 67  
                  +  +m+g+P++ ++
  KHJ35422.1 1124 HcAAMCGIPNQIID 1137
                  4479*****98765 PP

>> MutS_IV  MutS family domain IV
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.0      0.54   1.1e+03      52      83 ..     698     730 ..     696     732 .. 0.80
   2 !   43.1   1.2     2e-14   3.9e-11       1      91 [.     773     862 ..     773     863 .. 0.96

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.54
                 TCCCTTT.--SEEEEEECTCEEEEECCCHHHHH CS
     MutS_IV  52 rseakkv.pkefirlqtlknseryttaelkkle 83 
                 r +a +  p++f+++ t ++++ yt + l+++ 
  KHJ35422.1 698 RIHAGSCrPEDFVKVVTAFGQIGYTIDLLESYK 730
                 5566666477****************9999875 PP

  == domain 2  score: 43.1 bits;  conditional E-value: 2e-14
                 TTSHHHHHHHHHHHHHHHHHHHHHCCCCCCCT-.TTBEECCCSSSEEEEEE-TCCCTTT--SEEEEEECTCEEEEECCCHHHHHHHHHHHHH CS
     MutS_IV   1 gfdeeLdelrdrleelekeleeleekereklgi.kslkveynkvlGyylevtrseakkvpkefirlqtlknseryttaelkkleaelleaee 91 
                 g++ee+d++++++ e+ek l++l++k +e++g  +++ +++ ++  y+lev+ s   kvpk++  +++  +++ry+ ael++l ++l+ea+e
  KHJ35422.1 773 GVEEEFDKSQEQIFEIEKLLAKLLKKKQEDFGSaSQIAYKNVGKEIYQLEVPASI--KVPKDWQMMSSAGKYKRYYFAELRQLIRQLQEAQE 862
                 6789************************************************665..*********************************98 PP

>> MutS_II  MutS domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.9   0.1       1.8   3.7e+03     113     126 ..     115     128 ..      45     178 .. 0.66
   2 !   45.2   0.0   5.5e-15   1.1e-11       2     133 ..     445     589 ..     444     593 .. 0.73
   3 ?   -3.2   0.1       4.6   9.1e+03      82     106 ..     781     805 ..     759     813 .. 0.49

  Alignments for each domain:
  == domain 1  score: -1.9 bits;  conditional E-value: 1.8
                 HHHHHHHHHHHCCC CS
     MutS_II 113 alaAlgalisYlee 126
                 + + ++++++Y+e 
  KHJ35422.1 115 QSRKAKKIVNYIES 128
                 44444444444443 PP

  == domain 2  score: 45.2 bits;  conditional E-value: 5.5e-15
                 EEEEEEEE..TTTSEEEEEEEETTTTEEEEEEEEE...-HHHHHHHHHH-ESEEEEESS-SCCCH.HHHHHCHCTTT-EEEEESCCCCSHCCHHHHCHH CS
     MutS_II   2 ylaAisek..regrrvGlafiDlstgefvvsefed...feeleaeLsrlsPkElllpedlsesta.eeessklrelrsrvgvretvefesekaserlee 94 
                 y++Ai+e   +e +++G+a++D++tg f +sef d    +++e++L+++ P Elll++ + +s+a +       ++   +   ++ ef+s++       
  KHJ35422.1 445 YCVAIKEGiqNELPAFGFAIVDTATGLFLISEFVDdedLTKFETLLAQIRPQELLLEKGAISSKAmRILKCNTNPTTIWNYLKPNSEFWSAD------- 536
                 899999999667777********************9***********************998877433333333333333333444444444....... PP

                 HB--STTTTTTT...............GGG-HHHHHHHHHHHHHCCCCCSCCCC CS
     MutS_II  95 dfsvedldgfgl...............ekekklalaAlgalisYleetqkekel 133
                     ++l+  g                  ek+l ++A+gal++Yl  +++e++l
  KHJ35422.1 537 -MTRRELECSGYflndgddvwpeklhqAREKELLMSAVGALVQYLRSLKLERSL 589
                 .444444444434444444455799888899999***************99665 PP

  == domain 3  score: -3.2 bits;  conditional E-value: 4.6
                 CCSHCCHHHHCHHHB--STTTTTTT CS
     MutS_II  82 efesekaserleedfsvedldgfgl 106
                 ++e  ++ e+l   + +++ ++fg+
  KHJ35422.1 781 SQEQIFEIEKLLAKLLKKKQEDFGS 805
                 2333333333333333333355554 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.6  10.8         9   1.8e+04      70     175 ..      55     180 ..      16     225 .. 0.48
   2 ?    3.4   0.1     0.047        94     103     167 ..     777     862 ..     619     889 .. 0.69
   3 ?   16.2   0.2   5.5e-06     0.011      18      41 ..     954     977 ..     942     981 .. 0.83

  Alignments for each domain:
  == domain 1  score: -4.6 bits;  conditional E-value: 9
      AAA_23  70 kvkayveltfenkdgrytrsiererelskkkgkttkkaklelleideleqfisellgskki...ilnlilflgqer.................feefel 148
                 k++  +e+   +++   +++ ++e+++s  ++ t      ++++ +e  +++s+ l+ k++     +++ ++ +e+                    +++
  KHJ35422.1  55 KKQDKIEVGNIKEKVAANKEPHFEKSKSTLNTTTSHLLSPNKTNLNEYSDTLSSPLQEKYQsrkAKKIVNYIESESnsedeafeptqasrkrrRTQISK 153
                 333333333222222112222222222222222222222222222333333333333333333322333333333322233322222222222444555 PP

      AAA_23 149 kdkkerleelekeleeledekkllekl 175
                 ++kke  +e++++l +++de++  e++
  KHJ35422.1 154 NAKKEHEDEFSDDLATISDEDEVGEEN 180
                 666667777777777777776655555 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.047
      AAA_23 103 ttkkaklelleideleqfisellgskkiilnlilflgqerfeefel.....kdkke................rleelekeleeled 167
                 + +k++++++ei++l  ++ ++ + ++ + ++i+++  +++ ++++     k +k+                +l++l+++l+e+++
  KHJ35422.1 777 EFDKSQEQIFEIEKLLAKLLKKKQEDFGSASQIAYKNVGKEIYQLEvpasiKVPKDwqmmssagkykryyfaELRQLIRQLQEAQE 862
                 22333444444444333333332322224455555555553333333333322222444444444555555555555555555554 PP

  == domain 3  score: 16.2 bits;  conditional E-value: 5.5e-06
      AAA_23  18 skgltlItGpNGaGKTTildAikl 41 
                 + +++l+tG N aGK+Til+  + 
  KHJ35422.1 954 NAKINLLTGANAAGKSTILRMTCI 977
                 678****************86665 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.2      0.69   1.4e+03      35      58 ..      81     103 ..      79     105 .. 0.87
   2 ?   12.3   0.1   5.3e-05      0.11      24      39 ..     957     972 ..     947     983 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.69
      AAA_29  35 KSTllDAiqalLvpakkvrfNkaa 58 
                 KSTl    + lL p+k ++ N+ +
  KHJ35422.1  81 KSTLNTTTSHLLSPNK-TNLNEYS 103
                 9999999999****99.9999866 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 5.3e-05
      AAA_29  24 atlltGpsGsGKSTll 39 
                 + lltG++ +GKST+l
  KHJ35422.1 957 INLLTGANAAGKSTIL 972
                 68*************8 PP

>> DUF4611  Domain of unknown function (DUF4611)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.2   5.2   0.00071       1.4      16      90 ..     125     200 ..     110     206 .. 0.84

  Alignments for each domain:
  == domain 1  score: 9.2 bits;  conditional E-value: 0.00071
     DUF4611  16 rvkceapgeadrlksllsgvaqlreevsellstlveqeaqddvaaagdeeeegede.ddeeeekniknktksdePp 90 
                  ++ e ++e + ++   ++ ++ r+++s+  ++  e e +dd a+  de+e ge++ dd+e + +i+n +k + P+
  KHJ35422.1 125 YIESESNSEDEAFEPTQASRKRRRTQISKNAKKEHEDEFSDDLATISDEDEVGEENfDDDESDVTISNPKKRKRPS 200
                 58899999999**********************************9999999887646677779999999999998 PP

>> AAA_21  AAA domain, putative AbiEii toxin, Type IV TA system
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.3   4.8       6.1   1.2e+04     129     214 ..     105     185 ..      36     356 .. 0.63
   2 ?   12.3   0.2   5.3e-05      0.11       1      17 [.     957     973 ..     957     974 .. 0.95

  Alignments for each domain:
  == domain 1  score: -4.3 bits;  conditional E-value: 6.1
      AAA_21 129 elsvsepndlqfgkaltditsrawsllllldglrkerigllnifadyfgfakekrllqrlvrslklveielsdlgegeeliasvde 214
                 +ls   ++++q+ ka   +    ++++++++     ++ + +++++    +  k+  ++ +++++++ + +sd++e+ e++++ de
  KHJ35422.1 105 TLSSPLQEKYQSRKAKKIVNYIESESNSEDE-----AFEPTQASRKRRRTQISKNAKKEHEDEFSDDLATISDEDEVGEENFDDDE 185
                 4444444444444444444444444444333.....33333333333333333333344444444444444444444444444433 PP

  == domain 2  score: 12.3 bits;  conditional E-value: 5.3e-05
      AAA_21   1 lnvliGpNgsGKSnLLd 17 
                 +n+l+G+N++GKS++L+
  KHJ35422.1 957 INLLTGANAAGKSTILR 973
                 79*************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1201 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1257  (0.0701099); expected 358.6 (0.02)
Passed bias filter:                      490  (0.02733); expected 358.6 (0.02)
Passed Vit filter:                        63  (0.00351386); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.83u 0.32s 00:00:01.14 Elapsed: 00:00:00.45
# Mc/sec: 7980.70
//
Query:       KHJ35423.1  [L=867]
Description: putative raffinose synthase sip1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.9e-55  186.0   2.8    2.3e-50  171.2   2.8    3.1  1  Raffinose_syn  Raffinose synthase or seed imbibition protein 


Domain annotation for each model (and alignments):
>> Raffinose_syn  Raffinose synthase or seed imbibition protein Sip1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  171.2   2.8   1.3e-54   2.3e-50     196     615 ..     327     710 ..     303     814 .. 0.79

  Alignments for each domain:
  == domain 1  score: 171.2 bits;  conditional E-value: 1.3e-54
  Raffinose_syn 196 kivdkfGwctwdafylevdaegvekGvksledGGvpPkfviiddGwqsiekdedldkdaenvvkegeqlaarlvsikenkkfkkkkskkfiddsgs 291
                    +  d + +ctw+++ + ++ae + +  k l++  +     iidd wqs++  +d            +q+    ++++              ++   
     KHJ35423.1 327 DWHDGLTFCTWNSLGQRLTAEKLVSAAKYLAQNNINVTNFIIDDNWQSLDYRGD------------NQFQHGWIEFEA------D-----RNNFPL 399
                    45678899******************************************9999............455444444432......2.....234468 PP

  Raffinose_syn 292 GlkavvkdlkerfkslddvyvwhalaGywgGvrPeameelksklarpelspglkatmadlavdklveaGlGlvsPkkvkefydelhsylasaGvdG 387
                    Glk  v+ ++e+  s++++ vwha+ GywgG+ P++      kla+   +  ++ t+++ + +  +   + ++  + v++fy+e++ +l+s+Gv+ 
     KHJ35423.1 400 GLKHTVNCIREQQPSIKNIAVWHAILGYWGGLAPDG------KLAKLYSTSKIVRTDTE-KQNLPIDGKITVIAKEDVMKFYNEFYRFLSSCGVNA 488
                    **********************************54......44444333333333322.22333455689999********************** PP

  Raffinose_syn 388 vkvdvlqiletlaeelGGrvelakayyqalessvaknfndngviasmehnndflfla....tkqisivrvsddfyprdPasdpqgvywlqgvhivs 479
                    vk dv+++l+t+ +    r +l  +y +a      ++f + +vi++m+++ + lf +     k   ++r sddfyp+ P+s        +  hi s
     KHJ35423.1 489 VKTDVQSMLDTFVSAE-DRRDLINSYLDAWILNAFNHF-GLNVISCMSQTPHSLFYShmplNKPRFLIRNSDDFYPEIPTS--------HPWHIFS 574
                    ***********99765.688******999988888777.677*********999986333347778***************........889**** PP

  Raffinose_syn 480 vaynslflGef.iqPdwdmfqsvhpaaeyhaasraisGgpiyvsdklGkhnfdllkklvl..pdGs..ilrarlyalPtrdslfkdPlrdgesllk 570
                     a+n+lf  ++   Pdwdmfq+vh  + +haa+r +sGgpi ++d +G+h++ l+ ++    pdG   ilr  + ++    sl++   +++  ll+
     KHJ35423.1 575 NAHNALFTQHLnCLPDWDMFQTVHNYSGFHAAARCVSGGPICITDVPGEHDLKLIDQMTSlgPDGNtiILRPSMIGR----SLYQYTNYNDCKLLQ 666
                    *******9998457*****************************************9997435888633677777765....7999999******** PP

  Raffinose_syn 571 ifnlnkftGviGvfncqGagwskeerknkiykesvdtltgtvrak 615
                    i      tG+iG fn     +++e      +   ++ +   vr++
     KHJ35423.1 667 IGTCHEGTGIIGCFNIS-EEYCSELIPLANFPAVKNDMQYIVRVH 710
                    ***************85.456666666666655555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (867 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       363  (0.0202465); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.66u 0.24s 00:00:00.90 Elapsed: 00:00:00.40
# Mc/sec: 6437.33
//
Query:       KHJ35424.1  [L=1578]
Description: putative chromosome segregation protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   6.8e-135  451.6  73.7    7.3e-69  233.1  17.5    4.3  5  Spc7_N        N-terminus of kinetochore NMS complex subunit S
   7.5e-106  353.5  13.2   7.5e-106  353.5  13.2    2.5  3  Spc7          Spc7 kinetochore protein
    4.2e-16   58.8   0.2    9.1e-16   57.7   0.2    1.6  1  Spc7_C2       Spc7_C2
    1.6e-05   24.5   3.6         68    3.7   0.0    7.1  7  SipA_VBS      SipA vinculin binding site


Domain annotation for each model (and alignments):
>> Spc7_N  N-terminus of kinetochore NMS complex subunit Spc7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  204.7  30.3   6.1e-64   2.7e-60      88     599 ..      13     530 ..       2     536 .. 0.73
   2 !   22.0   6.2   9.8e-09   4.4e-05     549     600 ..     535     585 ..     529     593 .. 0.84
   3 !   22.5   6.0   6.8e-09     3e-05     549     600 ..     562     612 ..     555     621 .. 0.83
   4 !   25.9   2.3   6.3e-10   2.8e-06     549     599 ..     589     638 ..     581     645 .. 0.84
   5 !  233.1  17.5   1.6e-72   7.3e-69     549     924 ..     616    1001 ..     610    1002 .. 0.80

  Alignments for each domain:
  == domain 1  score: 204.7 bits;  conditional E-value: 6.1e-64
      Spc7_N  88 spqrnskkeesnskgkeellidlstpaeasvvgtenlanPFdtfnassir..valrteeeeqaaarEreekerrerEkkaileqReARRKSlAnRRVSF 184
                 s q+n+ k ++++ +  e lidls  + +  +++++  n   ++    i    +++ +ee+q +  ++ e+er++   k+i  +R+ARRKSlAnRRVSF
  KHJ35424.1  13 SRQKNNLKPTESTLDVVENLIDLSFDSCSNKTDSNEFLNSVSKYAGPQIEsqLCMNMKEEQQTLITDQIENERQKLQ-KEINLRRDARRKSLANRRVSF 110
                 44555555555555778999****9999999999999999999987775444899*****************98885.9******************** PP

      Spc7_N 185 ApEATLHTwnvvelaeDSTsSsas.nstRRa...Ssltaessaaeakkeseppsspeeqaeedea....esPaenqdlqqkkkrrrsstlaealsdada 275
                 ApEATLHTw+v+   +DST+S++s  st++a   Ss+t++ss++++  + +++ + ++  +  ++     s   + +++ ++ +++s  ++ ++++ d+
  KHJ35424.1 111 APEATLHTWDVLVEYQDSTTSTNStSSTKKAqslSSITMTSSDSQTVGSIDVSATKTSIMQGGIQgsmaVSDLVDLNNSYQTLKKNSEIAQLESNSLDN 209
                 ***********9999********9456887744467777777777777778777777777666654333344333344445555565566666667799 PP

      Spc7_N 276 dealsSspfsgdsadgseeteleeeaeedddsnsdssddddestamsl..demtsrsvasaqsdeSstsssarldeaLrqAakeAGtrgidydengdls 372
                 +e+lsSs  s ds+dg +++++ + +++  d++  +sd+ d+ t m+    e+t+ s++s++s eS  +ss +l+eaLrqAa +AGtrgi+yden d s
  KHJ35424.1 210 EEDLSSSC-SVDSTDGADDEDD-GDIND--DAAYLDSDSGDDRTFMTSnsGETTNFSITSKRSRES-NNSSLELNEALRQAAYQAGTRGIEYDENFDTS 303
                 99999999.9*******99884.44444..444444566677788876446788888888888888.89999*************************77 PP

      Spc7_N 373 meiadqeitgaFqpWikKgq...........rsefdaedlsarlDqenvnpsk..lsatkpesseakeaaadeqdedlsmdvTkavGgIiskks..... 453
                    + ++++     W kK +           ++e    +ls +  q   +  +  +  + +   e+++  ++ +d d smdvT+a+ +I++++      
  KHJ35424.1 304 KFEEMEKVIP-SSSWLKKNSpkgvdlhfkieKAE-PSLQLSKSSSQKLLKYGEekSIFEISPLVETTPVRKQIEDGDNSMDVTHALNRIVNNEVshpkp 400
                 4325555665.589****9878997755443111.223445555555553333333334445556677778999****************987788887 PP

      Spc7_N 454 ....kerresvarrks.igeetnlddqtmeltnvvGgIaqsespakeldaesdidedEemtmefTsvlGgvlnksafrakkaeeekeeseeserqeiee 547
                     +  + s   +   +  ++  dd+ m++t + GgI++ ++ + ++++++ i +++  ++ +   l    +k              +  ++r+++++
  KHJ35424.1 401 rgpiS--TGSLYTKLEeTVTSNASDDDMMDITVAHGGIQSPQEINDKFEVDNVISSHDVNSIRYKGQLVNFNQK--------------HVIKGRKSFYT 483
                 77431..333333333033444557999**********999998888888888877765555554332222222..............34567888989 PP

      Spc7_N 548 dagdedddadmeiTgavGgilpaieeqtepededqTagmelTtavGkIlppe 599
                   g+++    m+iT+a+Ggi+ +++   ++   d+Ta+m++Tta+G I+++ 
  KHJ35424.1 484 TLGEDQ----MDITTALGGIIKPVDSDPDTAT-DTTAAMDVTTALGGIIKSV 530
                 999999....**************99999988.9**************9765 PP

  == domain 2  score: 22.0 bits;  conditional E-value: 9.8e-09
      Spc7_N 549 agdedddadmeiTgavGgilpaieeqtepededqTagmelTtavGkIlppea 600
                 ++++d  a m++T+a+Ggi+  ++   ++   d+Ta+m++Tta+G I+++  
  KHJ35424.1 535 DTATDTTAAMDVTTALGGIIKSVDSDPDTAT-DTTAAMDVTTALGGIIKSVD 585
                 45678899***************99999987.9***************7654 PP

  == domain 3  score: 22.5 bits;  conditional E-value: 6.8e-09
      Spc7_N 549 agdedddadmeiTgavGgilpaieeqtepededqTagmelTtavGkIlppea 600
                 ++++d  a m++T+a+Ggi+  ++   ++   d+Ta+m++Tta+G I+++  
  KHJ35424.1 562 DTATDTTAAMDVTTALGGIIKSVDSDPDTAT-DTTAAMDVTTALGGIIKSVD 612
                 45678899***************99999987.9***************7655 PP

  == domain 4  score: 25.9 bits;  conditional E-value: 6.3e-10
      Spc7_N 549 agdedddadmeiTgavGgilpaieeqtepededqTagmelTtavGkIlppe 599
                 ++++d  a m++T+a+Ggi+  ++   ++   d+Ta+m++Tta+G I+++ 
  KHJ35424.1 589 DTATDTTAAMDVTTALGGIIKSVDSDPDTAT-DTTAAMDVTTALGGIIKSV 638
                 45678899***************99999987.9***************765 PP

  == domain 5  score: 233.1 bits;  conditional E-value: 1.6e-72
      Spc7_N  549 agdedddadmeiTgavGgilpaieeqtepededqTagmelTtavGkIlppeakesekeqekveaeaeseaaqlassPfqenvkaspakkpaskhvaa 645 
                  ++++d  a m++T+a+Ggi+  ++   ++   d+Ta+m++Tta+  I+++  ++ + + + v++++  +  +++s   + +     +k    + + +
  KHJ35424.1  616 DTATDTTAAMDVTTALGGIIKSVDSDPDTAT-DTTAAMDVTTALDGIIKSIGSD-HDTITYVNTTLHPQVIDAKSHVHRTKQLGLKKKVILDNVNFS 710 
                  45678899***************99999987.9***************887733.334444444454444555555555443333333334444667 PP

      Spc7_N  646 vasesgsPslasvrsrstr.qslsrresttptsk..srqssPvkskstpskqktpraarpstpaktppsskvksrsaSpkklfkselkesas..... 734 
                     +++sPs  + ++r+t  +++    s+  +++      sP+++ + ++ ++t + a p tp k+++s  + +   Sp+k++ + +++ ++     
  KHJ35424.1  711 FNPDKNSPSPRTNTRRKTSqRNIDIGDSKILRQSqaKDGYSPMRKPQISPSHSTLSLAPPLTPRKSTSSGGN-ISCSSPQKKTLKSKTSVSTplvis 806 
                  7888999998776666665366666777765555336678******9777799*9*********99988886.566777776655555555459998 PP

      Spc7_N  735 ..kkkspksksLFekdaetGestPsfvLkpkekrrssglGidkeGlgSPrvaeildrRrsigedaqeFvpqekekr..gvrFedpskleeevdrere 827 
                      ++pks+ L +k+   G s P++ L +k+  ++sg+G +k GlgSPrva++ldrR sig+ a++F+p+e  ++  + + +dp+ +e+e+  ere
  KHJ35424.1  807 neIPSTPKSNDLKGKNL--GFSIPNLTLSSKS-CHASGMGFNKLGLGSPRVADLLDRRDSIGNRANSFIPGEIISAplATSLKDPRLIEQELSDERE 900 
                  54334566667777766..***********98.9**************************************999977899**************** PP

      Spc7_N  828 eeekresgiieae....qleerdatlnLkdlIssLtPKknklkgRKSLhVGaArGlLGKRPaELDe.ddedeedstpKRLkgreaSPVKnirLpaPp 919 
                   e  +++g+ ++     + +e++at+nLk++I+sLtPKk   + RKSL VGaA GlLGKRP+ELDe dd de + t KRLk  + SPVKni+L+aPp
  KHJ35424.1  901 AEAGNNQGNFQKIrseiTGKEKNATSNLKEMIESLTPKKTLSRNRKSLRVGAAVGLLGKRPVELDEiDDIDELEGT-KRLKNHQGSPVKNIKLQAPP 996 
                  ******99666544446899**********************************************8888876655.******************** PP

      Spc7_N  920 skdet 924 
                  sk++t
  KHJ35424.1  997 SKNQT 1001
                  **998 PP

>> Spc7  Spc7 kinetochore protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   1.4      0.14   6.4e+02     157     192 ..      66     101 ..      57     208 .. 0.68
   2 ?   -4.0   1.2       1.2   5.3e+03     180     227 ..     892     937 ..     887     949 .. 0.57
   3 !  353.5  13.2  1.7e-109  7.5e-106       2     308 ..    1071    1380 ..    1070    1381 .. 0.99

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.14
        Spc7 157 lLekqeeeldellpeleeekaeleeeleklqeaaee 192
                 +++ +ee+ + + +++e+e+++l++e++  ++a+++
  KHJ35424.1  66 CMNMKEEQQTLITDQIENERQKLQKEINLRRDARRK 101
                 556677777778888888888888888877764333 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 1.2
        Spc7 180 eeeleklqeaaeelesidkeeLeelreelaelka.eieekkkelaelqe 227
                 e+el +++ea++     ++ + +++r+e++  ++   +++k+++++l+ 
  KHJ35424.1 892 EQELSDEREAEA---GNNQGNFQKIRSEITGKEKnATSNLKEMIESLTP 937
                 566666666332...3567777777777775443044455555555544 PP

  == domain 3  score: 353.5 bits;  conditional E-value: 1.7e-109
        Spc7    2 evepisLqdFLnmtgIrFmdltttkrrstiaptaeek...eeeekisledyvvAaactvPlLeLYqhscreLkkyisegrkiireieeetleenPpL 95  
                  e  +i+LqdFLnmt+IrFm+ltttkrr+ti p+a ++   ++e++is ed+v+++a t+P+LeL+qh+c+eLk+yisegrk +reie+et+eenPpL
  KHJ35424.1 1071 EDDRIQLQDFLNMTSIRFMELTTTKRRHTILPKANSQnngTGEKQISWEDCVATGAATIPMLELFQHACHELKRYISEGRKTVREIETETWEENPPL 1167
                  5679*****************************99999999******************************************************** PP

        Spc7   96 freYmeadpdvkalmdnqfklvKtnarlqakkdWYeWRmqllegLkegleenlegleedkelLekqeeeldellpeleeekaeleeeleklqeaaee 192 
                  freY++a+pd k lmdnq+k+vKt++rl++k++WY+WRm+l  +Lkegl +  eg+  d+e L++q+ +ld++lp+   + ++lee++++lq aa+e
  KHJ35424.1 1168 FREYISATPDLKFLMDNQLKNVKTHSRLLSKGQWYDWRMTLHGTLKEGLAKSAEGMVCDEEILNHQQMLLDSVLPSAILNAKSLEEKINELQVAAQE 1264
                  ************************************************************************************************* PP

        Spc7  193 lesidkeeLeelreelaelkaeieekkkelaelqeqleeleekieelkeqkseleeeiaeaervleeckgwsesevsrlkeevkaleeltgwkivsl 289 
                  +++++keeL ++r++l ++++++e kk +l elq+ql+++e++i e ++ k++l+++i  ae+++eec+gw+ se++ +k +v+ +eel gw+i+ +
  KHJ35424.1 1265 IANCNKEELSAARQRLITVDENYEYKKIRLVELQKQLQKIETDIVEKHQYKQKLQKKIYDAEKIKEECRGWTVSEIQIIKRRVEVIEELFGWAITAI 1361
                  ************************************************************************************************* PP

        Spc7  290 sgstleltyrselevsfdl 308 
                  sgs +++t+ +e++++f++
  KHJ35424.1 1362 SGSRISMTLLKEIRLVFNI 1380
                  ****************985 PP

>> Spc7_C2  Spc7_C2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.7   0.2     2e-19   9.1e-16       2      61 ..    1443    1502 ..    1442    1503 .. 0.97

  Alignments for each domain:
  == domain 1  score: 57.7 bits;  conditional E-value: 2e-19
     Spc7_C2    2 lLssvsagWdkalqvaedirrLnlkfPttvaktsdssiavtsslLlpklktKVevtfsld 61  
                  lL+++s++W ka ++a+di++L+l++Pt+v++  ++s+a++sslL+ +l tKV +tf l+
  KHJ35424.1 1443 LLEFISKSWRKAAKIAQDIHLLALSCPTQVSEITETSMAIESSLLIGPLATKVVLTFYLS 1502
                  799******************************************************886 PP

>> SipA_VBS  SipA vinculin binding site
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.2       2.8   1.2e+04      11      16 ..     141     146 ..     141     147 .. 0.84
   2 ?    2.8   0.0     0.028   1.3e+02       6      19 ..     515     528 ..     514     531 .. 0.82
   3 ?    2.8   0.0     0.028   1.3e+02       6      19 ..     542     555 ..     541     558 .. 0.82
   4 ?    2.8   0.0     0.028   1.3e+02       6      19 ..     569     582 ..     568     585 .. 0.82
   5 ?    2.8   0.0     0.028   1.3e+02       6      19 ..     596     609 ..     595     612 .. 0.82
   6 ?    2.8   0.0     0.028   1.3e+02       6      19 ..     623     636 ..     622     639 .. 0.82
   7 ?    3.7   0.0     0.015        68       6      21 ..     650     665 ..     649     666 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 2.8
    SipA_VBS  11 tsSLSn 16 
                 ++SLS+
  KHJ35424.1 141 AQSLSS 146
                 79***8 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.028
    SipA_VBS   6 AAKdVtsSLSnvls 19 
                 AA dVt++L  +++
  KHJ35424.1 515 AAMDVTTALGGIIK 528
                 899******87777 PP

  == domain 3  score: 2.8 bits;  conditional E-value: 0.028
    SipA_VBS   6 AAKdVtsSLSnvls 19 
                 AA dVt++L  +++
  KHJ35424.1 542 AAMDVTTALGGIIK 555
                 899******87777 PP

  == domain 4  score: 2.8 bits;  conditional E-value: 0.028
    SipA_VBS   6 AAKdVtsSLSnvls 19 
                 AA dVt++L  +++
  KHJ35424.1 569 AAMDVTTALGGIIK 582
                 899******87777 PP

  == domain 5  score: 2.8 bits;  conditional E-value: 0.028
    SipA_VBS   6 AAKdVtsSLSnvls 19 
                 AA dVt++L  +++
  KHJ35424.1 596 AAMDVTTALGGIIK 609
                 899******87777 PP

  == domain 6  score: 2.8 bits;  conditional E-value: 0.028
    SipA_VBS   6 AAKdVtsSLSnvls 19 
                 AA dVt++L  +++
  KHJ35424.1 623 AAMDVTTALGGIIK 636
                 899******87777 PP

  == domain 7  score: 3.7 bits;  conditional E-value: 0.015
    SipA_VBS   6 AAKdVtsSLSnvlskI 21 
                 AA dVt++L  +++ I
  KHJ35424.1 650 AAMDVTTALDGIIKSI 665
                 899******9988888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1578 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1507  (0.0840538); expected 358.6 (0.02)
Passed bias filter:                      362  (0.0201908); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.97u 0.27s 00:00:01.24 Elapsed: 00:00:00.48
# Mc/sec: 9908.98
//
Query:       KHJ35425.1  [L=377]
Description: putative methionine type [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      3e-45  154.5   0.0    3.7e-45  154.2   0.0    1.1  1  Peptidase_M24  Metallopeptidase family M24
      2e-21   76.0   5.0      2e-21   76.0   5.0    1.8  2  zf-C6H2        zf-MYND-like zinc finger, mRNA-binding
    5.7e-05   23.1   3.0    5.7e-05   23.1   3.0    2.2  2  zf-MYND        MYND finger


Domain annotation for each model (and alignments):
>> Peptidase_M24  Metallopeptidase family M24
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.2   0.0   6.2e-49   3.7e-45       1     208 [.     123     353 ..     123     354 .. 0.88

  Alignments for each domain:
  == domain 1  score: 154.2 bits;  conditional E-value: 6.2e-49
                    HHHHHHHHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHTT.....TCEESSSSEEEEGGGGGSTTTBCSSSB--TTEEEEEEEEEEETTEEEE CS
  Peptidase_M24   1 elirkaariasaaleavleaikpgvterelaaeieattlkrhg.....arglafppivasgenaavlhytpndrvlkegdlvlidagaeydgyasD 91 
                    e++rk++r+ +++l+ +++a kpgvt++ ++++++++ +++++      ++  fp++v++++n+ ++h++p++r l +gd+++id++  + gy++D
     KHJ35425.1 123 EAMRKVCRLGREVLDIAAAAAKPGVTTDYIDELVHKA-CIERNsypspLNYRHFPKSVCTSPNEVICHGIPDQRLLVDGDILNIDVTLYHGGYHGD 217
                    68*************99999***************99.6555559999************************************************ PP

                    EEEEEECS...SGSHHHHHHHHHHHHHHHHHHHC-STTSBHHHHHHHHHHHHHHTTBCCGBSSCSEEEESSSSSEEEEEESS..STTCSSB--TTB CS
  Peptidase_M24  92 itrTvlvG...kftpeqrelyeavleaqeaaikavkpGvtlseidaaarevlesaglakffphglGHgvGlevhdegpsvsr..esndgrkleeGm 182
                       T+++G   + +p+  +++e+ +e+++ ai++vkpGv ++e +++++++++s+   ++++ ++GHg+   +h + p++++  +++     +eGm
     KHJ35425.1 218 LNETYYIGdkaRADPDSIRVIETSRECLNLAIALVKPGVLFREFGNVIEKHAKSQMC-SVVKTYCGHGINTLFHCS-PNIPHyaKNKAVGSAKEGM 311
                    ********88888888999**********************************9766.88999***********98.*99886544467779**** PP

                    EEEEEEEEE....EET.....TT........EEEEEBEEEEEE CS
  Peptidase_M24 183 vftiEpgiy....fap.....ge........ggvriedtvlvt 208
                    +ftiEp+i       +     ++         ++++e+t+lvt
     KHJ35425.1 312 CFTIEPMIAlgthR-DrtwpdNWtsvtqdgkRTAQFEHTLLVT 353
                    ******77744431.13333422555555537**********9 PP

>> zf-C6H2  zf-MYND-like zinc finger, mRNA-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.0   5.0   3.4e-25     2e-21       1      46 [.      11      56 ..      11      57 .. 0.98
   2 ?   -3.0   0.1       1.6   9.4e+03      20      30 ..     282     292 ..     278     294 .. 0.64

  Alignments for each domain:
  == domain 1  score: 76.0 bits;  conditional E-value: 3.4e-25
     zf-C6H2  1 CasseCgkeassLqCptClklgikesfFCsqeCFkknwkkHkalHk 46
                C + +C+++assLqCptClklgi++ fFCsq+CFk++w++HkalHk
  KHJ35425.1 11 CLGVGCENDASSLQCPTCLKLGIRDVFFCSQDCFKRSWSSHKALHK 56
                999******************************************8 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 1.6
     zf-C6H2  20 klgikesfFCs 30 
                   gi++ f Cs
  KHJ35425.1 282 GHGINTLFHCS 292
                 45677777777 PP

>> zf-MYND  MYND finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   3.0   9.5e-09   5.7e-05       4      36 ..      16      53 ..      11      55 .. 0.86
   2 ?   -0.8   0.1      0.29   1.7e+03      13      23 ..     271     282 ..     263     284 .. 0.71

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 9.5e-09
                T--.B-SC.E-TTT.....S-SEESSHHHHHHCHHHHCC CS
     zf-MYND  4 Cgkaealk.kCagC.....ksvfYCskeCqradwksHkt 36
                C++ +a + +C+ C     + vf+Cs++C ++ w+sHk 
  KHJ35425.1 16 CEN-DASSlQCPTClklgiRDVFFCSQDCFKRSWSSHKA 53
                888.55666*****88888899***************96 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.29
                 -TTTS-S.EESS CS
     zf-MYND  13 CagCksv.fYCs 23 
                  + C+ v +YC+
  KHJ35425.1 271 SQMCSVVkTYCG 282
                 567887767997 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (377 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       437  (0.0243739); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.21s 00:00:00.69 Elapsed: 00:00:00.39
# Mc/sec: 2908.11
//
Query:       KHJ35426.1  [L=664]
Description: putative fork head domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.2e-33  112.9   0.1    1.1e-32  112.1   0.1    1.4  1  Forkhead  Forkhead domain
      7e-12   45.5   0.1    1.7e-11   44.3   0.1    1.7  1  FHA       FHA domain
  ------ inclusion threshold ------
      0.057   13.7   0.0       0.21   11.9   0.0    1.9  2  FHA_2     FHA domain


Domain annotation for each model (and alignments):
>> Forkhead  Forkhead domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.1   0.1   1.8e-36   1.1e-32       2      86 ..     332     417 ..     331     418 .. 0.95

  Alignments for each domain:
  == domain 1  score: 112.1 bits;  conditional E-value: 1.8e-36
                 -----HHHHHHHHHHT-TTT-B-HHHHHHHHHCC-HHHHCC.-CCHHHHHHHHHHHHC--EEETT.-T.TSS--EEE--TTHHHHH CS
    Forkhead   2 kPpysYaaLIaqAiksspekkltLseIyefieenfpyyrtaakkgWqnSirhnLslnkcFekvpreee.egkgslwtidpeseekf 86 
                 kP+ysY++LI qAi++++++kltL++Iy+fi+++++yyr++   gWqnSirhnLslnk+Fekv r+++ +gkg+ w+i++++++++
  KHJ35426.1 332 KPSYSYSQLISQAILDTEDEKLTLNGIYTFIQDKYAYYRHQLGGGWQNSIRHNLSLNKAFEKVARDTHePGKGMKWHIKDDHRNEM 417
                 9***************************************99**********************9666379*********998876 PP

>> FHA  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   0.1   2.8e-15   1.7e-11       7      69 .]     147     211 ..     119     211 .. 0.91

  Alignments for each domain:
  == domain 1  score: 44.3 bits;  conditional E-value: 2.8e-15
                 TTSSEETT...STTSTTTEEEEEEETTCEEEEEEEESSSSSEEETTEEESTTSEEEE-TTEEEEET CS
         FHA   7 sdcdivld...dpsiSrkHalikfdkgsgkvyleDlgSknGtfvNgqrigkgepveLksgdvielG 69 
                 +d++i +d   ++++Sr Ha+i+fd+++ ++ +   g +nG+ vN++++++g+++ L+sg++ie+G
  KHJ35426.1 147 DDNTIHIDlgpSKTVSRIHAEISFDSDTESWNISVHG-RNGIKVNNHPLKRGDSISLSSGEIIEIG 211
                 57888888888899*********************77.**************************98 PP

>> FHA_2  FHA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   3.5e-05      0.21      34      85 ..     159     210 ..     156     219 .. 0.92
   2 ?   -3.2   0.0       1.7     1e+04      55      74 ..     614     633 ..     613     640 .. 0.76

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 3.5e-05
       FHA_2  34 kkcSrnqvelkadlekklvkvkqlGanpssvngkklkknesvelkegqtlel 85 
                 k +Sr + e+  d ++++ ++   G+n  +vn+  lk+++s++l++g+ +e+
  KHJ35426.1 159 KTVSRIHAEISFDSDTESWNISVHGRNGIKVNNHPLKRGDSISLSSGEIIEI 210
                 57899999*****************************************998 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.7
       FHA_2  55 kqlGanpssvngkklkknes 74 
                 +++G+n++s  + +++ +++
  KHJ35426.1 614 RNIGLNSASTTEEEIEDDDQ 633
                 57999999999999986544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (664 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       460  (0.0256568); expected 358.6 (0.02)
Passed bias filter:                      351  (0.0195772); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.40
# Mc/sec: 4951.49
//
Query:       KHJ35427.1  [L=2108]
Description: putative snf2 family helicase snf2 family helicase atpase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.2e-42  143.3   0.7    1.2e-41  142.6   0.7    1.3  1  SNF2_N      SNF2 family N-terminal domain
    2.9e-22   79.1   0.0    1.1e-21   77.2   0.0    2.1  1  Helicase_C  Helicase conserved C-terminal domain
    1.3e-06   28.5   0.0    6.8e-06   26.2   0.0    2.3  1  ResIII      Type III restriction enzyme, res subunit
    1.4e-05   24.9   0.1     0.0027   17.4   0.0    2.7  2  SWI2_SNF2   SWI2/SNF2 ATPase
    0.00053   20.0   0.0     0.0016   18.5   0.0    1.8  1  SAM_2       SAM domain (Sterile alpha motif)
  ------ inclusion threshold ------
       0.54   10.1   9.5      0.037   13.9   0.7    3.2  3  HIRA_B      HIRA B motif
        2.2    8.3   4.6        9.8    6.2   4.6    2.1  1  LRR19-TM    Leucine-rich repeat family 19 TM domain


Domain annotation for each model (and alignments):
>> SNF2_N  SNF2 family N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.6   0.7   4.8e-45   1.2e-41      47     349 ..    1226    1547 ..    1157    1548 .. 0.80

  Alignments for each domain:
  == domain 1  score: 142.6 bits;  conditional E-value: 4.8e-45
                  ..HHHHHTT--EEE---TTS--HHHHHHHHH...HHTTTS---.............S-EEEE--HHHHHHHHHHHHHH-TTS-EEE--SSHHHH.-- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xx RF
      SNF2_N   47 esaeakqsvrGGiLaDemGLGKTvqvlalilaqrakeekdkek......krkdtlagptLivvPaslldqWeneierhvsssalrvlvyggqkk.mk 136 
                  +s++ ++s++G++La+ mGLGKT+q+++l+ a  +++  +++       + +  +   tLi++P sl+++W++e+  +v++s l  l   +++  + 
  KHJ35427.1 1226 VSITDEKSMQGCLLAHTMGLGKTMQTITLLVAIAEAS--RSNDpsvssqIPESLRVSRTLILCPPSLVNNWMDELLLWVPDSILGELRKVDSSIkSL 1320
                  6788999************************554433..3322346665555556666************************997776665542255 PP

                  ---------------EEEE-HHHHHHHT...............TTS-S-S-SEEEES-GGGT--TTSHHHHHHHH---S-EEEE-S--SSS-HHHHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  137 kkntkvapklladydvvittYdvlsreaelq.........kkrsvlkqvewkrvvlDEghtlknstskaaeavskLstsnrwiltGTPiqnsledly 224 
                  +++ ++  ++ ++ +v++++Y++ +  ++++         +  s++     + ++ DE+h++kn ++ ++ a sk++++ r+ ltG P+ n++e+++
  KHJ35427.1 1321 PQRLQIIIDWNEEGGVLVIGYEIFRDLVNYKsknisdaehELVSKVLLEGPNIIIADEAHRMKNRKAAITIATSKFRSKSRIALTGSPLANNVEEYH 1417
                  6667788999******************999*****9776555566666799********************************************* PP

                  HHHHHH-TTTT--HHHHHHHTHHHHH............HHHHHHHHHHHTT-STTEE---GGGT--S---EEEEEEEEE--HHHHHHHH........ CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  225 gLlkfLreepfgekqtfdkllqrpie............aqaekgrsrLlqllqrlmlrrakkdveknlPpkteeiiflklskverksYnrllevlrk 309 
                  ++++ + ++ +g    f+  + +pi+            +++ k    L   l++ + r+  + ++ +lPpk+e +i ++l++v++++Y+        
  KHJ35427.1 1418 TMIEWVAPNYLGPIVEFRAKYVEPIQagnyqnstayerRKSLKMLGVLSADLAPKVHRADMSVMKNDLPPKKEFVITVPLTDVQKEAYT-------I 1507
                  **************************9*999966543333333334444445577777777777777**********************.......2 PP

                  ............HHHHHH-HHH-HHHHHHHHHHHHH---X CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
      SNF2_N  310 kalakllkrseaalkssskskekilelllelrqacnhpql 349 
                   +++ +  ++  ++k ++ +++ + + l  l   cnhp++
  KHJ35427.1 1508 FVRSMMAGNNYTTTKLGEVTSTTVWHWLAVLSLLCNHPEC 1547
                  3333334444444444443336677777888888888765 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.2   0.0   4.4e-25   1.1e-21       2     111 .]    1616    1727 ..    1615    1727 .. 0.94

  Alignments for each domain:
  == domain 1  score: 77.2 bits;  conditional E-value: 4.4e-25
                  HHHHHHHHH.HHTTTTSEEEEEESSHHHHHH.HHHHHHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSS.EEEESGGGTSSSTSTTESEEEESSSSS CS
  Helicase_C    2 kleallell.kleeeggkilifvntidrlek.vklllekkgikvavlhgelpqnereeileqfnkgesd.vLiatdvaerGidipkvnlVinfdlpr 95  
                  k++ l+++l   +++g+k+l+f+++i +l+   +++ ++k+ ++a+l+g++  ++r+   ++fn+g++d +Li+t++++ G++++++n Vi+fd+++
  KHJ35427.1 1616 KVLLLCQILdACKSIGDKALVFSQSIPTLDFlEDVF-KRKNRNYARLDGSTAMSKRQVQTKDFNNGDTDiYLISTTAGGLGLNLQSANRVIIFDFKF 1711
                  7888999999889****************8856666.5667******************************************************** PP

                  SHHHHHHHHTTSSSTT CS
  Helicase_C   96 nvtsyiqriGRtgRag 111 
                  n+    q+iGR++R+g
  KHJ35427.1 1712 NPIMEEQAIGRAYRIG 1727
                  **************97 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.2   0.0   2.6e-09   6.8e-06       4     169 ..    1210    1408 ..    1207    1410 .. 0.73

  Alignments for each domain:
  == domain 1  score: 26.2 bits;  conditional E-value: 2.6e-09
                  E-HHHHHHHHHHT.........TTSEEE.EEESTTSTHHHHHHHHHHHH-S....................-EEEEESSHHHHHHHHHHGGGGTGG. CS
      ResIII    4 lreyQeeaienlleklks...krdkrgl.ikmaTGtGKTlvaaklierllkkgkee...............kflflvprkslleqtleefkkflsea 81  
                  ++++Q e ++ l +++ s   ++  +g+ ++++ G GKT+  + l  +++++ + +               ++l+l+p  sl++ +++e+  + ++ 
  KHJ35427.1 1210 IKKHQVEGVRFLWNQIVSitdEKSMQGClLAHTMGLGKTMQTITLLVAIAEASRSNdpsvssqipeslrvsRTLILCP-PSLVNNWMDELLLWVPDS 1305
                  67899999999998888876644445555**********98877777777766666789******************9.689********9999998 PP

                  ...GEEEESSS-B--...............-SEEEEEHHHHHHTH................HHHTTT-S...........EEEEETGGGTTS.TTTH CS
      ResIII   82 ykeigkkvsgdkkka........kekdstnkkilvttiqsldadseee........eeeseellrdrfd...........viiiDEaHrlgakkswr 151 
                      g+  + d+ ++            +++  +lv+ ++ +    + +                    +           +ii DEaHr++  k+  
  KHJ35427.1 1306 I--LGELRKVDSSIKslpqrlqiIIDWNEEGGVLVIGYEIFRDLVNYKsknisdaeH-----------ElvskvllegpnIIIADEAHRMKNRKAAI 1389
                  7..555555555555555554443566777888888888777666222333333323...........245556666677************97666 PP

                  HH.HHT---SEEEEEESS- CS
      ResIII  152 ei.lekfkeavllglTATp 169 
                   i   kf+++ +++lT+ p
  KHJ35427.1 1390 TIaTSKFRSKSRIALTGSP 1408
                  655999**********977 PP

>> SWI2_SNF2  SWI2/SNF2 ATPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    4.4   0.1    0.0098        25       1      50 [.    1213    1267 ..    1213    1270 .. 0.74
   2 !   17.4   0.0   1.1e-06    0.0027     118     163 ..    1369    1414 ..    1337    1427 .. 0.79

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0098
   SWI2_SNF2    1 qQyravekavervke....gdrkgGviWHtqGSGKsltmvflakklle.eelknp 50  
                  +Q+ +v+ + +++ +    ++ +g ++ Ht G GK+++ ++l  +++e ++ ++p
  KHJ35427.1 1213 HQVEGVRFLWNQIVSitdeKSMQGCLLAHTMGLGKTMQTITLLVAIAEaSRSNDP 1267
                  6777777777777666554667888999**********99999998883355555 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 1.1e-06
   SWI2_SNF2  118 ereniivlvDEaHRsqygelakklr.kalpnaafigFTGTPilkkdk 163 
                  e    i+++DEaHR +  + a ++  + ++  ++i++TG P+ ++ +
  KHJ35427.1 1369 EGP-NIIIADEAHRMKNRKAAITIAtSKFRSKSRIALTGSPLANNVE 1414
                  444.4789**********99999862679*************98544 PP

>> SAM_2  SAM domain (Sterile alpha motif)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   6.1e-07    0.0016      23      65 ..      47      90 ..      43      91 .. 0.90

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 6.1e-07
                HHHHHTTCSHHHHHTTSCHHHHH.HTTHHHHHHHHHHHHHHHHH CS
       SAM_2 23 dnFrdagitgaelllrlteedLk.rlGitsvghrkkilkkiqel 65
                 ++rd+++tg  ll++++++ Lk ++Gi ++g+r  i+++i+++
  KHJ35427.1 47 AILRDQEVTGSVLLKEINMSVLKnEFGIRALGRRSFIMSAIDQF 90
                589*******6677***************************986 PP

>> HIRA_B  HIRA B motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.7   1.4e-05     0.037      11      21 ..     247     257 ..     246     259 .. 0.92
   2 ?    1.2   0.0      0.14   3.6e+02       9      14 ..     308     313 ..     307     317 .. 0.82
   3 ?   -3.5   0.8         4     1e+04       7      11 ..     459     463 ..     459     463 .. 0.95

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.4e-05
      HIRA_B  11 KKRVaPtLiSs 21 
                 +KR+aPtL+Ss
  KHJ35427.1 247 RKRIAPTLVSS 257
                 9*********8 PP

  == domain 2  score: 1.2 bits;  conditional E-value: 0.14
      HIRA_B   9 dGKKRV 14 
                 +G+KR+
  KHJ35427.1 308 NGRKRI 313
                 9****9 PP

  == domain 3  score: -3.5 bits;  conditional E-value: 4
      HIRA_B   7 tKdGK 11 
                 tKdGK
  KHJ35427.1 459 TKDGK 463
                 9***9 PP

>> LRR19-TM  Leucine-rich repeat family 19 TM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   4.6    0.0038       9.8      66      98 ..     699     731 ..     687     735 .. 0.80

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0038
    LRR19-TM  66 tenrnslseasdtnsedddDGfiEDkYidteed 98 
                  ++ +s+s+ + ++s dddD fi+D +id e++
  KHJ35427.1 699 DIEDESISSSEPQSSGDDDDDFIDDDFIDDEDE 731
                 45667788888888999***********99875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (2108 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1334  (0.0744046); expected 358.6 (0.02)
Passed bias filter:                      417  (0.0232584); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.10u 0.28s 00:00:01.38 Elapsed: 00:00:00.46
# Mc/sec: 13679.12
//
Query:       KHJ35428.1  [L=661]
Description: putative beta rna 5 -triphosphatase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-58  198.2   7.1    3.2e-58  197.0   7.1    1.7  1  mRNA_triPase  mRNA capping enzyme, beta chain


Domain annotation for each model (and alignments):
>> mRNA_triPase  mRNA capping enzyme, beta chain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  197.0   7.1   1.8e-62   3.2e-58       2     219 .]     373     619 ..     372     619 .. 0.94

  Alignments for each domain:
  == domain 1  score: 197.0 bits;  conditional E-value: 1.8e-62
                   -HHHHHHHHHHHHHHHH......CTCCGGCCEEEEEEEEEEEETTTSSB---SBSS-EEE-TTCTEEEEE-B-HHHHHHHHHHHHHHHH.....HTT CS
  mRNA_triPase   2 deitksvsdwiiaaldn......iksekrsqiEiEaklGlivdkstkeRlklpvsteaivennadskfesgvdedqfkelnnfLnelsrr...neee 89 
                   +++tk+v+d++++++++      ++ ++ +qiEiEaklG +++k+t++R+ lpv++e+i+++n ++ f+s+++e+q+++ln+fLne+  +   n+++
    KHJ35428.1 373 EHMTKVVADFLYLHVVSrndleeLSAKG-VQIEIEAKLGELINKDTNQRFFLPVMSECILADNLRVGFKSSMTEKQHQRLNEFLNEMVMNshtNNSS 468
                   79*************9999998666665.*********************************************************98777778899 PP

                   CCCTTTEEEEEEEEEEEEEE-S...............-SSS--EEEEEEETTT--EEEEEEEEEEEEEEEE-TT.SSSEEEEEEEEEEE-SSS.... CS
  mRNA_triPase  90 nskrekvslkeskevDkfYelk...............kkeekskirvskdsenqevlkkieKeriadlniylPn.sklDyriSinlElpvses.... 166
                   ++ r k+++ +++evDkfY+++                +++++k+rv+ d+++++vl+ki K+r+ +l+i+ +   +lD+riSinlE+p++++    
    KHJ35428.1 469 SKSRVKIDYLHRREVDKFYDIPkelqaalptvikermPPHHSAKLRVTLDQKSKKVLAKIIKARVINLDIHGGIfGTLDCRISINLEMPINDEfdel 565
                   999********************************9999*********************************973689*************999988 PP

                   HHHCTTS--SEEEEEEEEEEEECCGTEEEEEEEE..SSS.---S--EEEEEEEEEE CS
  mRNA_triPase 167 kaklskktpvseRlkeRlSyihkksgiqfDLtkv..ekt.ektkkteekyElEiEi 219
                    a+ ++++++++R+k+RlSy++++  +q+DLt++  + + +++ +te+++ElEiEi
    KHJ35428.1 566 IAAGKTSNQSRDRNKDRLSYTQTY--YQIDLTQItqNLSvNNDLRTEKEHELEIEI 619
                   8899999*****************..********8755568999***********8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (661 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1279  (0.0713369); expected 358.6 (0.02)
Passed bias filter:                      437  (0.0243739); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.62u 0.27s 00:00:00.89 Elapsed: 00:00:00.44
# Mc/sec: 4512.98
//
Query:       KHJ35429.1  [L=1152]
Description: putative proteasome cyclosome [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.3e-54  182.0   2.6    7.3e-54  182.0   2.6    1.6  2  RPN2_C           26S proteasome regulatory subunit RPN2 C-ter
    2.9e-38  128.4  17.5    2.2e-09   37.3   0.0    8.0  7  PC_rep           Proteasome/cyclosome repeat
    8.9e-19   67.7   0.0    5.3e-15   55.6   0.0    4.0  4  HEAT_2           HEAT repeats
      1e-05   25.9   0.1      0.007   16.9   0.0    4.6  4  HEAT_EZ          HEAT-like repeat
    0.00012   22.1   0.1        7.2    7.2   0.0    4.8  4  HEAT             HEAT repeat
  ------ inclusion threshold ------
      0.048   13.7   0.1        8.6    6.4   0.0    3.4  3  Cnd1             non-SMC mitotic condensation complex subunit
      0.075   13.0   0.0       0.25   11.3   0.0    1.8  1  Clathrin_H_link  Clathrin-H-link
      0.089   13.5   0.2        4.5    8.2   0.0    3.7  2  HEAT_PBS         PBS lyase HEAT-like repeat
        2.3    9.0   6.6        2.3    9.0   3.7    2.4  3  TbpB_A           N-Lobe handle Tf-binding protein B


Domain annotation for each model (and alignments):
>> RPN2_C  26S proteasome regulatory subunit RPN2 C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.1       5.1     1e+04      79      90 ..     368     379 ..     358     406 .. 0.41
   2 !  182.0   2.6   3.7e-57   7.3e-54       1     160 []     869    1047 ..     869    1047 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 5.1
                 ------------ CS
      RPN2_C  79 eekeekekkeke 90 
                 +++e+++ +e++
  KHJ35429.1 368 SKSEDNDATESD 379
                 111111111111 PP

  == domain 2  score: 182.0 bits;  conditional E-value: 3.7e-57
                  -BEEEEETTTBEE--EEEEES-TTTTSSS-S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG................---------------- CS
      RPN2_C    1 TaiIglnkdLkiPkfefksnakpslFaYPpeleekkekekekvatAvLSttakakarakkkekek...............eeeekeedkmdvdeeke 82  
                  T+iI+l++dL+iP+++f+++++pslF+YP e+e+k++++++ +atAvLStta+ak+ra+kke+++               + + +++dkmdvde+++
  KHJ35429.1  869 TSIICLDHDLDIPNVKFHCATRPSLFDYPFEQEVKANETPTLIATAVLSTTAQAKRRAQKKERAQrresmdidqapltprTIAPTDDDKMDVDEQQK 965 
                  9*****************************************************************************99778899********999 PP

                  ----------------......--SS----SSEEEEESSSB--TTCCTTEEE-SSSSEEESSS-SSSSEEEEEESSTSSSSSEE CS
      RPN2_C   83 ekekkekekkekekee......ekkkkekektfekleNpaRVlpaQlkyisfkkdsrYkpvkkkgtgGivllkdkkpeeeeelv 160 
                  +k+++  +kk ++++e       kkk e+ek +++++N++RVlp+Qlk+isf ++ rY+pvkk +tgG+vll d++p+ee++l+
  KHJ35429.1  966 DKNDNIIDKKIDSEKEivhtetFKKKIEREKLGYEIDNMSRVLPSQLKHISF-PAGRYRPVKK-PTGGVVLLIDTRPNEEKSLI 1047
                  9977777777666666777777999***************************.**********.*****************998 PP

>> PC_rep  Proteasome/cyclosome repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.9   0.0   1.5e-06    0.0031       1      30 [.     485     513 ..     485     517 .. 0.91
   2 !   22.1   0.1     7e-08   0.00014       1      34 [.     524     556 ..     524     557 .. 0.93
   3 !   14.8   0.3   1.5e-05     0.029       1      32 [.     559     590 ..     559     593 .. 0.90
   4 !   20.8   0.1   1.8e-07   0.00037       4      33 ..     597     626 ..     594     628 .. 0.94
   5 !    6.5   0.0    0.0063        13       8      31 ..     671     695 ..     671     699 .. 0.64
   6 !   37.3   0.0   1.1e-12   2.2e-09       1      35 []     734     768 ..     734     768 .. 0.97
   7 !   14.4   1.0     2e-05     0.039       1      23 [.     812     833 ..     812     838 .. 0.90

  Alignments for each domain:
  == domain 1  score: 17.9 bits;  conditional E-value: 1.5e-06
                 HHHHHHHHHCTTSTCHHHHHHHHHHHHHHS CS
      PC_rep   1 GAllALGlihaGsgneeaislLkpylsdts 30 
                 +A++ALG+ih G+ ++  ++lL+pyl+ ++
  KHJ35429.1 485 SATAALGVIHRGNLSQ-CRKLLEPYLPRPT 513
                 69**********9999.*********9776 PP

  == domain 2  score: 22.1 bits;  conditional E-value: 7e-08
                 HHHHHHHHHCTTSTCHHHHHHHHHHHHHHSSHHH CS
      PC_rep   1 GAllALGlihaGsgneeaislLkpylsdtsaevr 34 
                 GAl+A Gli+a++g + a+++Lk++ ++ + e++
  KHJ35429.1 524 GALYAYGLIFANHGAG-ALDYLKDQFKNAQEEII 556
                 9***************.********999988876 PP

  == domain 3  score: 14.8 bits;  conditional E-value: 1.5e-05
                 HHHHHHHHHCTTSTCHHHHHHHHHHHHHHSSH CS
      PC_rep   1 GAllALGlihaGsgneeaislLkpylsdtsae 32 
                 G +l+LG++++ +g+ee++  +++++  +sa 
  KHJ35429.1 559 GGALGLGIAGMATGSEEIYLDMREVIFTDSAL 590
                 789********************999888775 PP

  == domain 4  score: 20.8 bits;  conditional E-value: 1.8e-07
                 HHHHHHCTTSTCHHHHHHHHHHHHHHSSHH CS
      PC_rep   4 lALGlihaGsgneeaislLkpylsdtsaev 33 
                 lA+Gli++G+g+  a++ + +y++dt++e+
  KHJ35429.1 597 LAMGLIMLGTGSIKALEEMITYAHDTQHEK 626
                 9**************************986 PP

  == domain 5  score: 6.5 bits;  conditional E-value: 0.0063
                 HHCTTSTCH.HHHHHHHHHHHHHSS CS
      PC_rep   8 lihaGsgne.eaislLkpylsdtsa 31 
                 ++++G+g++ ++++lL+  +sd ++
  KHJ35429.1 671 MAYCGTGSNkAIRKLLHVAVSDVND 695
                 69*******5555555544555554 PP

  == domain 6  score: 37.3 bits;  conditional E-value: 1.1e-12
                 HHHHHHHHHCTTSTCHHHHHHHHHHHHHHSSHHHH CS
      PC_rep   1 GAllALGlihaGsgneeaislLkpylsdtsaevra 35 
                 GA++ALG+ +aG+g +eai+lL+p+++d++++vr+
  KHJ35429.1 734 GAAMALGISCAGTGLDEAIDLLEPMIKDPTDFVRQ 768
                 9******************************9985 PP

  == domain 7  score: 14.4 bits;  conditional E-value: 2e-05
                 HHHHHHHHHCTTSTCHHHHHHHH CS
      PC_rep   1 GAllALGlihaGsgneeaislLk 23 
                 G++lALG+i+aG g++ +i l  
  KHJ35429.1 812 GSALALGIIDAG-GRNCTIGLQT 833
                 89**********.***9998866 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.6   0.0      0.19   3.8e+02       7      58 ..      13      69 ..       9      81 .. 0.80
   2 ?    1.4   0.0      0.21   4.3e+02      32      80 ..     611     662 ..     593     670 .. 0.53
   3 !   19.4   0.0   5.3e-07    0.0011      16      88 .]     628     706 ..     609     706 .. 0.73
   4 !   55.6   0.0   2.6e-18   5.3e-15       2      88 .]     683     775 ..     682     775 .. 0.90

  Alignments for each domain:
  == domain 1  score: 1.6 bits;  conditional E-value: 0.19
      HEAT_2  7 alendpdpevrraairaLg......rignpealpaLvellededpavRraaaeaLgai 58
                +l  d++pe++  a+++L       +     ++  +  l ed++   R+ aa  L+++
  KHJ35429.1 13 FL-ADEEPELKVFALQTLNddidalWTEVAGSIGQIETLYEDKEFSERQLAALVLAKV 69
                56.7999999999999999755444444447799999999999999999999999987 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 0.21
      HEAT_2  32 alpaLvelled.ed.pavRraaa.eaLgaigdpealpaLkellddddddvvR 80 
                 al+ ++ ++ d ++   vR  a+ ++L  ++ +e+++ L e l+ ++d+  R
  KHJ35429.1 611 ALEEMITYAHDtQHeKTVRGLAVgMSLIMYDCQENADELIEGLLKEPDPTLR 662
                 5555555553322312344444422333333355556665555555555544 PP

  == domain 3  score: 19.4 bits;  conditional E-value: 5.3e-07
      HEAT_2  16 vrraai.raLgrignpealpaLve.llededpavRraaaeaLg..ai..gdpealpaLkellddddddvvReaAaeaLa 88 
                 vr  a+ ++L  ++ +e  + L+e ll+ +dp  R+  +++ +   +  g+++a++ L++ + +d +d+vR+ A+ +L+
  KHJ35429.1 628 VRGLAVgMSLIMYDCQENADELIEgLLKEPDPTLRYGGIMTVAmaYCgtGSNKAIRKLLHVAVSDVNDDVRRIAVMSLG 706
                 5544444666688888888999995669999999999998665324443579999999999999999999999999985 PP

  == domain 4  score: 55.6 bits;  conditional E-value: 2.6e-18
      HEAT_2   2 daLlqalendpdpevrraairaLg..rignpealpaLvell.ededpavRraaaeaLgai....gdpealpaLkellddddddvvReaAaeaLa 88 
                  +Ll ++++d +++vrr a+++Lg   ++ p ++p +vell e+ +p+vR+ aa+aLg      g++ea+++L+ + +d + d+vR+ A+++La
  KHJ35429.1 683 RKLLHVAVSDVNDDVRRIAVMSLGfiLFRKPGSVPRMVELLsESYNPHVRYGAAMALGIScagtGLDEAIDLLEPMIKD-PTDFVRQGALISLA 775
                 57999999****************9999*************889**************77665579*********8875.56778999999986 PP

>> HEAT_EZ  HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   0.0      0.65   1.3e+03       5      27 ..     484     510 ..     482     511 .. 0.85
   2 ?   -3.3   0.0       7.3   1.5e+04      21      42 ..     641     657 ..     638     664 .. 0.67
   3 !    9.9   0.0   0.00052         1       3      53 ..     697     740 ..     695     741 .. 0.82
   4 !   16.9   0.0   3.5e-06     0.007       1      53 [.     729     775 ..     729     777 .. 0.86

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.65
     HEAT_EZ   5 raAawaLGr....laggepellqplvp 27 
                 ++A +aLG      +++++ ll+p++p
  KHJ35429.1 484 FSATAALGVihrgNLSQCRKLLEPYLP 510
                 789999999999977799999999998 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 7.3
     HEAT_EZ  21 llqplvpeilpaLlalLnddsd 42 
                 ++q + +e++  Ll     +++
  KHJ35429.1 641 DCQENADELIEGLL-----KEP 657
                 56777788888888.....655 PP

  == domain 3  score: 9.9 bits;  conditional E-value: 0.00052
     HEAT_EZ   3 vRraAawaLGrlaggepellqplvpeilpaLlalL.nddsdeVRaaAagaLg 53 
                 vRr A++ LG   +  ++         +p ++ lL ++ +++VR+ Aa aLg
  KHJ35429.1 697 VRRIAVMSLG---FILFRKPG-----SVPRMVELLsESYNPHVRYGAAMALG 740
                 7888888888...77777766.....788888888899*************9 PP

  == domain 4  score: 16.9 bits;  conditional E-value: 3.5e-06
     HEAT_EZ   1 wrvRraAawaLGrlaggepellqplvpeilpaLlalLnddsdeVRaaAagaLg 53 
                 + vR +Aa+aLG   ++++  l     e++++L ++ +d+ d VR+ A++ L+
  KHJ35429.1 729 PHVRYGAAMALGI--SCAGTGLD----EAIDLLEPMIKDPTDFVRQGALISLA 775
                 579*********5..33566666....**********************9986 PP

>> HEAT  HEAT repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.8   0.0       1.3   2.6e+03       6      25 ..      11      30 ..       9      31 .. 0.85
   2 ?    4.8   0.0     0.021        43       9      27 ..     690     708 ..     682     710 .. 0.83
   3 ?    3.3   0.0     0.062   1.2e+02       3      25 ..     717     740 ..     716     744 .. 0.78
   4 !    7.2   0.0    0.0036       7.2       2      27 ..     752     777 ..     751     779 .. 0.90

  Alignments for each domain:
  == domain 1  score: -0.8 bits;  conditional E-value: 1.3
                HHHHT-SSHHHHHHHHHHHH CS
        HEAT  6 lkllsDpspeVReaAakaLg 25
                l  l D++pe    A+++L 
  KHJ35429.1 11 LGFLADEEPELKVFALQTLN 30
                56789***********9996 PP

  == domain 2  score: 4.8 bits;  conditional E-value: 0.021
                 HT-SSHHHHHHHHHHHHHH CS
        HEAT   9 lsDpspeVReaAakaLgal 27 
                  sD + +VR+ A+ +Lg +
  KHJ35429.1 690 VSDVNDDVRRIAVMSLGFI 708
                 499*************966 PP

  == domain 3  score: 3.3 bits;  conditional E-value: 0.062
                 HHHHHHH.T-SSHHHHHHHHHHHH CS
        HEAT   3 Plllkll.sDpspeVReaAakaLg 25 
                 P +++ll ++ +p+VR+ Aa aLg
  KHJ35429.1 717 PRMVELLsESYNPHVRYGAAMALG 740
                 56666665555899*********9 PP

  == domain 4  score: 7.2 bits;  conditional E-value: 0.0036
                 HHHHHHHHT-SSHHHHHHHHHHHHHH CS
        HEAT   2 lPlllkllsDpspeVReaAakaLgal 27 
                 ++ll  +++Dp  +VR+ A+ +L+ +
  KHJ35429.1 752 IDLLEPMIKDPTDFVRQGALISLAMI 777
                 578999****************9987 PP

>> Cnd1  non-SMC mitotic condensation complex subunit 1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.7   0.0       1.3   2.6e+03      24      50 ..      45      71 ..      14      86 .. 0.63
   2 ?    2.1   0.0     0.092   1.8e+02      25      49 ..     685     709 ..     665     732 .. 0.76
   3 ?    6.4   0.0    0.0043       8.6       2      49 ..     731     779 ..     730     807 .. 0.77

  Alignments for each domain:
  == domain 1  score: -1.7 bits;  conditional E-value: 1.3
        Cnd1 24 epLrkrLkDedpyVRktaaivvakLil 50
                 ++++  +D++   R+ aa+v+ak++ 
  KHJ35429.1 45 GQIETLYEDKEFSERQLAALVLAKVYY 71
                344445555555556666666666644 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.092
        Cnd1  25 pLrkrLkDedpyVRktaaivvakLi 49 
                  L+ +++D +  VR+ a++ +  ++
  KHJ35429.1 685 LLHVAVSDVNDDVRRIAVMSLGFIL 709
                 5777889999999999999887664 PP

  == domain 3  score: 6.4 bits;  conditional E-value: 0.0043
        Cnd1   2 iRalairtlgcirvpnlveylvepLrkrLkDedpyVRktaaivvakL.i 49 
                 +R  a ++lg  +  + +++ ++ L+  +kD+   VR+ a+i +a + +
  KHJ35429.1 731 VRYGAAMALGISCAGTGLDEAIDLLEPMIKDPTDFVRQGALISLAMImV 779
                 6777788888888888899999999999999999999999999987742 PP

>> Clathrin_H_link  Clathrin-H-link
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00012      0.25       6      62 ..     205     269 ..     203     271 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00012
  Clathrin_H_link   6 ddlyvqqFeqllaqgnykeAakvAaespq.giLR.......tpetIqrfkqvpaqpgqlspllqY 62 
                      ++++ + Fe++l++g+yk+ + +A e+ + +iLR        +e I+++++ + +pg +  l+ Y
       KHJ35429.1 205 EKIIERLFENCLQEGRYKQVIGIAIEAHNlEILRkvlkrasQNEAISKLQTTDGTPGPTEELMEY 269
                      6788899******************9987579994444444479999999999999999999998 PP

>> HEAT_PBS  PBS lyase HEAT-like repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.6   0.0      0.66   1.3e+03       1      12 [.     697     708 ..     697     708 .. 0.92
   2 ?    8.2   0.0    0.0022       4.5       1      24 [.     731     758 ..     731     761 .. 0.90

  Alignments for each domain:
  == domain 1  score: 0.6 bits;  conditional E-value: 0.66
                 HHHHHHHHHHHC CS
    HEAT_PBS   1 vRraAakaLgql 12 
                 vRr A+ +Lg +
  KHJ35429.1 697 VRRIAVMSLGFI 708
                 9*********76 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0022
                 HHHHHHHHHHHCTS....GGGHHHHHHH CS
    HEAT_PBS   1 vRraAakaLgqlgd....eeaipaLlea 24 
                 vR+ Aa aLg   +    +eai++L   
  KHJ35429.1 731 VRYGAAMALGISCAgtglDEAIDLLEPM 758
                 9***********************9765 PP

>> TbpB_A  N-Lobe handle Tf-binding protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       4.2   8.4e+03      49      96 ..     218     270 ..     204     276 .. 0.61
   2 ?    9.0   3.7    0.0011       2.3      28      95 ..     921     999 ..     899     999 .. 0.76
   3 ?   -2.5   0.1         4   8.1e+03      19      66 ..    1026    1069 ..    1022    1100 .. 0.51

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 4.2
      TbpB_A  49 eediekvedellkipkeke....vkkksdeke.sfvhshdgskksrkrdyqYV 96 
                 e+ +++v +   ++ +++     +k+ s+++  s +++ dg+    ++ ++YV
  KHJ35429.1 218 EGRYKQVIGIAIEAHNLEIlrkvLKRASQNEAiSKLQTTDGTPGPTEELMEYV 270
                 55556666633333333222113233333333599999999988888999998 PP

  == domain 2  score: 9.0 bits;  conditional E-value: 0.0011
      TbpB_A  28 kiprrniapkdeegee.....evplseediekvedellkipkekevk......kksdekesfvhshdgskksrkrdyqY 95 
                 + +rr  +++  +  e     ++pl++  i  ++d++ ++ +++++k      kk+d+++++vh+ + +kk + +++ Y
  KHJ35429.1 921 QAKRRAQKKERAQRREsmdidQAPLTPRTIAPTDDDKMDVDEQQKDKndniidKKIDSEKEIVHTETFKKKIEREKLGY 999
                 5566666555555555888999********99999888888887733345555***************99998888766 PP

  == domain 3  score: -2.5 bits;  conditional E-value: 4
      TbpB_A   19 kqPalGfamkiprrniapkdeegeeevplseediekvedellkipkek 66  
                  k+P+ G +  i  r   p++e++  e++l+ + ++k ++ l+ +++++
  KHJ35429.1 1026 KKPTGGVVLLIDTR---PNEEKSLIEEKLKKKIVDKATN-LSLVEDTQ 1069
                  66666666666666...3343334455555555544444.33333333 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1152 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       916  (0.0510904); expected 358.6 (0.02)
Passed bias filter:                      488  (0.0272185); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.82u 0.31s 00:00:01.12 Elapsed: 00:00:00.47
# Mc/sec: 7396.47
//
Query:       KHJ35430.1  [L=529]
Description: putative pre-mrna-processing factor 17 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.3e-32  110.5   5.7    1.1e-06   29.2   0.4    7.0  7  WD40         WD domain, G-beta repeat
    2.6e-13   50.0   0.1    2.5e-05   24.5   0.0    4.6  4  ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
     0.0006   19.7   0.3       0.32   10.9   0.0    3.0  3  eIF2A        Eukaryotic translation initiation factor eIF2A
  ------ inclusion threshold ------
       0.04   13.0   0.2       0.11   11.5   0.0    1.8  3  DUF1513      Protein of unknown function (DUF1513)
        0.3   10.0   3.5         60    2.4   0.0    3.9  4  Ge1_WD40     WD40 region of Ge1, enhancer of mRNA-decapping p


Domain annotation for each model (and alignments):
>> WD40  WD domain, G-beta repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.2   0.4   3.1e-10   1.1e-06       3      38 .]     230     267 ..     228     267 .. 0.85
   2 !   28.9   0.0     4e-10   1.4e-06       2      38 .]     273     310 ..     272     310 .. 0.95
   3 ?    1.1   0.0      0.23   8.2e+02      17      38 .]     330     354 ..     314     354 .. 0.62
   4 !   11.8   0.0    0.0001      0.36       3      38 .]     360     396 ..     358     396 .. 0.85
   5 ?    0.6   0.0      0.35   1.3e+03      14      36 ..     415     437 ..     408     438 .. 0.72
   6 !   20.2   0.3   2.3e-07   0.00081       5      38 .]     450     486 ..     446     486 .. 0.86
   7 !   13.4   0.0   3.1e-05      0.11       7      38 .]     496     529 .]     490     529 .] 0.79

  Alignments for each domain:
  == domain 1  score: 29.2 bits;  conditional E-value: 3.1e-10
                 EEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 
                  ++ ++ H +++++l+f pd+   l+sGs D tv+iWd
  KHJ35430.1 230 MVHQWKSHvKPICGLRFFPDSGHlLLSGSVDTTVKIWD 267
                 578899**********7777777256***********9 PP

  == domain 2  score: 28.9 bits;  conditional E-value: 4e-10
                 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                 ++lrt++GH +  +++ f+p g+ ++s+s+D+ +++Wd
  KHJ35430.1 273 ELLRTYKGHnKALSDITFNPTGTQFLSASYDRMIKLWD 310
                 789******888*************************9 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.23
                 EEETTSSE...EEEEETTSEEEEEE CS
        WD40  17 afspdgaw...lasGsdDgtvriWd 38 
                 +f+p+  +   +++G+ D+++  +d
  KHJ35430.1 330 RFNPSPEYcheFLAGMSDKKIVQFD 354
                 35666666557557*6699998766 PP

  == domain 4  score: 11.8 bits;  conditional E-value: 0.0001
                 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 
                  +++++ H   ++ + f ++++ +++ sdD+++r Wd
  KHJ35430.1 360 VVQEYDHHlAAINTITFVDENRRFMTTSDDKSLRAWD 396
                 67889999999999998888888888899*******9 PP

  == domain 5  score: 0.6 bits;  conditional E-value: 0.35
                 EEEEEETTSSEEE..EEETTSEEEE CS
        WD40  14 tslafspdgawla..sGsdDgtvri 36 
                 t  + +p+g+++a  s s D+++ +
  KHJ35430.1 415 TRASLHPSGKYVAyqS-S-DNNIFV 437
                 666779*****86533.6.888876 PP

  == domain 6  score: 20.2 bits;  conditional E-value: 2.3e-07
                 EEEESS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS
        WD40   5 rtltGH.ss...vtslafspdgawlasGsdDgtvriWd 38 
                 + ++GH +s   + ++a spdg++++sG+  g v +Wd
  KHJ35430.1 450 KAFKGHnTSgyaI-DVACSPDGQFVSSGDSGGYVCFWD 486
                 5699**7447999.99************66*******9 PP

  == domain 7  score: 13.4 bits;  conditional E-value: 3.1e-05
                 EESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS
        WD40   7 ltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 
                 l +  + vt++a++p  +  +++++  gt+r Wd
  KHJ35430.1 496 LQAAeGAVTCVAWHPRETSkVVTAGLEGTIRYWD 529
                 5545445****999999997678888*******9 PP

>> ANAPC4_WD40  Anaphase-promoting complex subunit 4 WD40 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.3   0.0    0.0016       5.7      37      73 ..     237     274 ..     224     285 .. 0.75
   2 !   11.4   0.0   8.4e-05       0.3      36      83 ..     280     327 ..     276     333 .. 0.87
   3 ?    0.9   0.0      0.16   5.8e+02      54      89 ..     342     376 ..     338     379 .. 0.84
   4 !   24.5   0.0     7e-09   2.5e-05      22      90 ..     444     509 ..     417     511 .. 0.85

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0016
  ANAPC4_WD40  37 edsevrsLaWkpd.gklLavaysdgevrlldaesgkvv 73 
                  + + + +L++ pd g+lL  +  d++v++ d+++ + +
   KHJ35430.1 237 HVKPICGLRFFPDsGHLLLSGSVDTTVKIWDVYHDREL 274
                  556677888777559*****************986543 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 8.4e-05
  ANAPC4_WD40  36 kedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvkseka 83 
                  ++++  +++ ++p g+ +  a  d  ++l d e+g++++ ++++++ +
   KHJ35430.1 280 GHNKALSDITFNPTGTQFLSASYDRMIKLWDTETGQCINRFTTGKTPH 327
                  567788999*********************************998854 PP

  == domain 3  score: 0.9 bits;  conditional E-value: 0.16
  ANAPC4_WD40  54 avaysdgevrlldaesgkvvhslsvksekavtclgW 89 
                    ++sd ++  +d  + +vv++++ +   a++++++
   KHJ35430.1 342 LAGMSDKKIVQFDTRTREVVQEYDHHLA-AINTITF 376
                  46899******************99987.5888877 PP

  == domain 4  score: 24.5 bits;  conditional E-value: 7e-09
  ANAPC4_WD40  22 fRlngqrvwtleedkedsevrsLaWkpdgklLavaysdgevrlldaesgkvvhslsvksekavtclgWg 90 
                  fR n ++ +++  +++++   ++a +pdg++   + s g v + d ++gk+ h+l++++  avtc+ W 
   KHJ35430.1 444 FRQNRKKAFKG--HNTSGYAIDVACSPDGQFVSSGDSGGYVCFWDWKTGKMWHKLQAAEG-AVTCVAWH 509
                  69999*****9..7888888899***********************************99.6******6 PP

>> eIF2A  Eukaryotic translation initiation factor eIF2A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.9   0.0   8.9e-05      0.32      76     157 ..     254     337 ..     247     341 .. 0.82
   2 ?    0.7   0.0      0.11     4e+02      78     116 ..     343     384 ..     338     438 .. 0.62
   3 ?    3.4   0.0     0.017        61     109     161 ..     467     519 ..     456     528 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 8.9e-05
                 EEESSSSCEEEEEEC....SCEEEEEEEEES--EEEE-TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT--.EEEE-TTSSE CS
       eIF2A  76 viyGkmpakvslfdl....kvkviskleeqkrNtiffspkgklvllaGfgnlaGeleiwdvkkkkkiakaeaanat.lvewspdgry 157
                 ++ G ++ +v+++d+    ++  ++k ++++   i f+p+g+ +l a +  +   +++wd+++ ++i+++   ++  ++ ++p+ +y
  KHJ35430.1 254 LLSGSVDTTVKIWDVyhdrELLRTYKGHNKALSDITFNPTGTQFLSASYDRM---IKLWDTETGQCINRFTTGKTPhVIRFNPSPEY 337
                 6789999999999995533377777788888999*****************9...*************9998887514678887776 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.11
                 ESSSSCEEEEEECS.CEEEEEEEE..ES--EEEE-TTSSEEE CS
       eIF2A  78 yGkmpakvslfdlk.vkvisklee..qkrNtiffspkgklvl 116
                  G +++k++ fd++  +v+ ++++  ++ Nti f ++++ ++
  KHJ35430.1 343 AGMSDKKIVQFDTRtREVVQEYDHhlAAINTITFVDENRRFM 384
                 688888999999874334444443115678888877765444 PP

  == domain 3  score: 3.4 bits;  conditional E-value: 0.017
                 -TTSSEEEEE-TTSSS-EEEEEETTTTEEEEEEE-TT..--EEEE-TTSS.EEEEE CS
       eIF2A 109 spkgklvllaGfgnlaGeleiwdvkkkkkiakaeaan..atlvewspdgr.yvlTa 161
                 sp g++v  +   +  G + +wd k+ k  +k++aa+   t v w+p  +  v+Ta
  KHJ35430.1 467 SPDGQFVSSG---DSGGYVCFWDWKTGKMWHKLQAAEgaVTCVAWHPRETsKVVTA 519
                 5555555543...4447788888887777776665542145567887654145555 PP

>> DUF1513  Protein of unknown function (DUF1513)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0         1   3.7e+03     222     253 ..     288     318 ..     281     328 .. 0.74
   2 ?   -4.0   0.0       1.6   5.8e+03       4      40 ..     335     371 ..     332     383 .. 0.62
   3 ?   11.5   0.0   3.1e-05      0.11     212     275 ..     454     520 ..     431     527 .. 0.73

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 1
     DUF1513 222 vavdsegrlvavtsPrgnlvavwdlasgelle 253
                 + ++ +g+ + +++    ++ +wd+++g++++
  KHJ35430.1 288 ITFNPTGTQF-LSASYDRMIKLWDTETGQCIN 318
                 6666665444.666677788999999999876 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 1.6
     DUF1513   4 peRaHgvaahpsdpeavavaRrPgtfllvldlesgee 40 
                 pe +H+++a  sd+++v +  r  +++   d++ ++ 
  KHJ35430.1 335 PEYCHEFLAGMSDKKIVQFDTRTREVVQEYDHHLAAI 371
                 5667777777777777777777666666666555555 PP

  == domain 3  score: 11.5 bits;  conditional E-value: 3.1e-05
     DUF1513 212 laalagYigsvavdsegrlvavtsPrgnlvavwdlasgelleeaaladaa..gvaaaksg..flvssG 275
                  ++  gY  +va++ +g++v  +  +g+ v +wd ++g++ ++ + a+ a  +va  +++   +v+ G
  KHJ35430.1 454 GHNTSGYAIDVACSPDGQFV-SSGDSGGYVCFWDWKTGKMWHKLQAAEGAvtCVAWHPREtsKVVTAG 520
                 466789**********9776.8999*************999888777643114544443344455555 PP

>> Ge1_WD40  WD40 region of Ge1, enhancer of mRNA-decapping protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.3   0.2     0.018        65     222     245 ..     226     248 ..     219     253 .. 0.79
   2 ?    2.4   0.0     0.017        60     188     215 ..     283     310 ..     271     327 .. 0.81
   3 ?    1.1   0.0     0.042   1.5e+02      11      38 ..     403     430 ..     398     440 .. 0.85
   4 ?    0.4   0.0     0.068   2.4e+02     183     215 ..     453     486 ..     436     518 .. 0.81

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.018
    Ge1_WD40 222 eeprCLheWkPhdGkslssllfld 245
                   ++ +h+Wk h  k+++ l f  
  KHJ35430.1 226 VPKKMVHQWKSHV-KPICGLRFFP 248
                 567899******5.9***997764 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.017
    Ge1_WD40 188 sliveaafspdGtalatasedGevkffq 215
                   +++ +f p Gt    as d ++k++ 
  KHJ35430.1 283 KALSDITFNPTGTQFLSASYDRMIKLWD 310
                 3688889999999999999999999886 PP

  == domain 3  score: 1.1 bits;  conditional E-value: 0.042
    Ge1_WD40  11 vdykWeqkyyvGqLvavhregkylayai 38 
                 ++y  e + y+    ++h +gky+ay  
  KHJ35430.1 403 IKYIAEPHMYPLTRASLHPSGKYVAYQS 430
                 789999999999999**********975 PP

  == domain 4  score: 0.4 bits;  conditional E-value: 0.068
    Ge1_WD40 183 kieehs.liveaafspdGtalatasedGevkffq 215
                 k +++s   ++ a spdG  ++   + G+v f+ 
  KHJ35430.1 453 KGHNTSgYAIDVACSPDGQFVSSGDSGGYVCFWD 486
                 44555556789999******************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (529 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       747  (0.0416643); expected 358.6 (0.02)
Passed bias filter:                      554  (0.0308997); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.42
# Mc/sec: 3768.57
//
Query:       KHJ35431.1  [L=699]
Description: putative bud site selection protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.3e-148  494.4   0.2   2.9e-148  494.1   0.2    1.1  1  ChAPs     ChAPs (Chs5p-Arf1p-binding proteins)
    0.00026   21.5   0.0        4.7    8.3   0.0    4.1  4  TPR_14    Tetratricopeptide repeat
    0.00028   21.3   0.0       0.17   12.4   0.0    2.9  2  TPR_19    Tetratricopeptide repeat
     0.0049   17.0   0.1        0.2   11.8   0.0    2.4  2  TPR_9     Tetratricopeptide repeat
  ------ inclusion threshold ------
      0.012   15.7   4.3       0.99    9.7   0.2    3.1  3  TPR_2     Tetratricopeptide repeat
      0.013   15.4   0.0      0.026   14.4   0.0    1.5  1  WSN       Domain of unknown function
      0.049   13.7   0.2        4.7    7.5   0.0    2.7  2  TPR_7     Tetratricopeptide repeat
        0.1   12.9   0.0        1.2    9.5   0.0    2.6  3  TPR_8     Tetratricopeptide repeat
       0.15   12.0   0.0        9.5    6.2   0.0    2.5  2  TPR_1     Tetratricopeptide repeat
       0.16   12.0   0.3       0.42   10.6   0.0    1.9  2  DUF627    Protein of unknown function (DUF627)


Domain annotation for each model (and alignments):
>> ChAPs  ChAPs (Chs5p-Arf1p-binding proteins)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  494.1   0.2  1.6e-151  2.9e-148       2     395 .]      49     434 ..      48     434 .. 0.98

  Alignments for each domain:
  == domain 1  score: 494.1 bits;  conditional E-value: 1.6e-151
                 XXXEEEEEEEXXXXSXHHHHHHHHHHHHCCSSSSXXXTTSXXXXXECCEEEEEEEETTTTEEEEEEEESSXXEEEEEEETTSXBEEXHHHHHHHHHHHH CS
       ChAPs   2 keiGtyfyvtGvdtSssasiavylkqlteslseksqlwFgkkktfkvskisyctyNaFskvDvrvevkiPGsvesyvvdergekeeatdelWaEtflsg 100
                 k+iG+y++vtGvd+Sssas+a+y+++lt++          +++t k+ +++yc+yNaFs++D+rv+v+iPGsvesy vdergek+ a+delW+Et+l++
  KHJ35431.1  49 KTIGVYHHVTGVDASSSASLAAYINTLTYKE--------NHQQTQKIVEGVYCCYNAFSRLDMRVHVNIPGSVESYAVDERGEKKVASDELWLETYLCS 139
                 789***************************9........678899****************************************************** PP

                 HHHHHHHHHTTTTTTS----TTEEE--GGG--SSS-HHHHHHHTHHHHTTCGGGG---TT-SS--SSSSHHHHHHHHHHHHHT-HHHHHHHHHHHHTT- CS
       ChAPs 101 vlRsllladdnadddevqklvetrklnPltsgelekkaelFlkafeklfekgvklgadsevqvptlvnNyLvetllklvrltkrydralellekLkeee 199
                 vlR++ + d  ++ ++++k++++r++nP+t++e+e+k   Fl+a+e+lf++g++lg++s vqvp++v+N+L+++llk++++t r++++++l+ekL +++
  KHJ35431.1 140 VLRAYSYGDC-GSGEKIRKIIGVRRFNPVTNTEAEHK---FLQAAEQLFFRGWQLGSSSVVQVPNNVSNHLTSGLLKYFQTTGRFTSGINLFEKLSTKN 234
                 *******987.999***********************...*********************************************************** PP

                 GGGHHHHHHHHHHTT-HHHHHHHHHHHH-SSS-HHHHHHHHHHHHHHSS--...........HHHHHHHHHHHHH-TT-HHHHHHHHHHHHHTT-HHHH CS
       ChAPs 200 pevvillarvllladeEvdavkllneeleeeekdaelLllqaefllskkke...........elAlevakravksaPsefktWalLvkvYikledienA 287
                  ev++lla+v+l+ +eEv+av++l+++++++++d+ +L++qaefll+k+ +           ++Al +a+r++ +aPsef tWa+L++vY+++e++e+A
  KHJ35431.1 235 IEVSSLLAKVFLMGNEEVQAVRVLHNSIKQSPMDYVMLDTQAEFLLKKAMNpksqklkqewlQMALGCADRSTVAAPSEFGTWARLAEVYVAMENWEDA 333
                 ************************************************988889999****************************************** PP

                 HHHHHT----SS--------SS-------EB---TTSS--TT--------SS---S---HHHHT-TTTT--HHHHHHHHHHHHHHHHH-HHHHHHHHHH CS
       ChAPs 288 LltLNscPmftykekdvlrriapakseddlhlPlpldvvldevselnssevteeqkevdpsLlrlkaanlkstfakaYelLteivkkiGWeeLLkvRsk 386
                 L+tLNscPmfty++kd+  +++p++    + lP+  +++lde++++ +s+    +++v+psLl l+a+++k+tf++aY++Lt +++kiGW++LLk+Rs+
  KHJ35431.1 334 LTTLNSCPMFTYQDKDIPVMPEPKD----IYLPMLPETRLDEIDSEPESR---YSDQVHPSLLSLRATQYKGTFKHAYSILTDMTAKIGWDQLLKIRSN 425
                 *************************....******************999...7899****************************************** PP

                 HB-XXXXXX CS
       ChAPs 387 vFvmeeEYr 395
                 vFvmeeEYr
  KHJ35431.1 426 VFVMEEEYR 434
                 ********8 PP

>> TPR_14  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.7   0.0       2.1   3.7e+03       7      27 ..     210     230 ..     206     244 .. 0.83
   2 ?   -0.6   0.0       1.9   3.3e+03       6      32 ..     240     266 ..     235     276 .. 0.85
   3 !    8.3   0.0    0.0026       4.7       3      25 ..     316     338 ..     314     341 .. 0.90
   4 !    6.9   0.1    0.0074        13       2      30 ..     576     604 ..     575     612 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.7 bits;  conditional E-value: 2.1
      TPR_14   7 laeallalGdpdeAiallrra 27 
                 l++++ + G++   i+l++++
  KHJ35431.1 210 LLKYFQTTGRFTSGINLFEKL 230
                 66788899**********987 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 1.9
      TPR_14   6 alaeallalGdpdeAiallrralalaP 32 
                 +la+++l   +  +A+++l+  +++ P
  KHJ35431.1 240 LLAKVFLMGNEEVQAVRVLHNSIKQSP 266
                 57888888888889*******999998 PP

  == domain 3  score: 8.3 bits;  conditional E-value: 0.0026
      TPR_14   3 allalaeallalGdpdeAiallr 25 
                  +++lae++ a +++++A++ l+
  KHJ35431.1 316 TWARLAEVYVAMENWEDALTTLN 338
                 79*****************9987 PP

  == domain 4  score: 6.9 bits;  conditional E-value: 0.0074
      TPR_14   2 eallalaeallalGdpdeAiallrralal 30 
                 e +  l+++ ++l    eA++++r++l+ 
  KHJ35431.1 576 EEWEILGSLAERLHHRSEAMEAYRACLSI 604
                 678889********************985 PP

>> TPR_19  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.6   0.0     0.013        23       5      57 ..     218     267 ..     217     277 .. 0.88
   2 !   12.4   0.0   9.5e-05      0.17      27      53 ..     316     342 ..     306     350 .. 0.84

  Alignments for each domain:
  == domain 1  score: 5.6 bits;  conditional E-value: 0.013
      TPR_19   5 gdyaeAlalleqalqedpknaearllLAeallalgqldeAealLdalpeedpd 57 
                 g++++ ++l+e++   + kn e+  lLA++ l  ++  +A ++L    ++ p 
  KHJ35431.1 218 GRFTSGINLFEKL---STKNIEVSSLLAKVFLMGNEEVQAVRVLHNSIKQSPM 267
                 78888999****9...99************************99877777665 PP

  == domain 2  score: 12.4 bits;  conditional E-value: 9.5e-05
      TPR_19  27 arllLAeallalgqldeAealLdalpe 53 
                  +++LAe+++a+ ++++A  +L+  p 
  KHJ35431.1 316 TWARLAEVYVAMENWEDALTTLNSCPM 342
                 57899*****************98665 PP

>> TPR_9  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   11.8   0.0   0.00011       0.2      11      54 ..     296     339 ..     290     349 .. 0.91
   2 ?    2.4   0.0     0.096   1.7e+02      28      57 ..     574     603 ..     571     630 .. 0.88

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 0.00011
       TPR_9  11 weralavverllllaPddpeerrdRGlllaqlGclsaAladLea 54 
                  + al +++r  + aP + + +   + +++ +++++ Al  L+ 
  KHJ35431.1 296 LQMALGCADRSTVAAPSEFGTWARLAEVYVAMENWEDALTTLNS 339
                 5779***********************************99875 PP

  == domain 2  score: 2.4 bits;  conditional E-value: 0.096
       TPR_9  28 dpeerrdRGlllaqlGclsaAladLeayla 57 
                 ++ee+   G l ++l + s+A+++  a+l+
  KHJ35431.1 574 SAEEWEILGSLAERLHHRSEAMEAYRACLS 603
                 78999999******************9995 PP

>> TPR_2  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.3       7.9   1.4e+04      19      29 ..     171     181 ..     170     182 .. 0.85
   2 ?    6.6   0.0    0.0054       9.7       3      22 ..     316     335 ..     314     339 .. 0.90
   3 ?    9.7   0.2   0.00055      0.99       1      30 [.     575     604 ..     575     606 .. 0.94

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 7.9
       TPR_2  19 eAleafekAle 29 
                 eA++ f +A e
  KHJ35431.1 171 EAEHKFLQAAE 181
                 89999999986 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0054
       TPR_2   3 alynlGlayyklgdyeeAle 22 
                  + +l+++y ++ ++e+Al 
  KHJ35431.1 316 TWARLAEVYVAMENWEDALT 335
                 599***************96 PP

  == domain 3  score: 9.7 bits;  conditional E-value: 0.00055
       TPR_2   1 aealynlGlayyklgdyeeAleafekAlel 30 
                 ae +  lG ++++l +  eA ea++++l++
  KHJ35431.1 575 AEEWEILGSLAERLHHRSEAMEAYRACLSI 604
                 789999*********************986 PP

>> WSN  Domain of unknown function
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   1.5e-05     0.026       5      49 ..     210     254 ..     207     261 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.5e-05
         WSN   5 iveklsilaRitNaIsLqaglidgsikvddvisELLnlgsvklse 49 
                 +++ +++  R t++I L   l++++i v  +++ ++ +g+++++ 
  KHJ35431.1 210 LLKYFQTTGRFTSGINLFEKLSTKNIEVSSLLAKVFLMGNEEVQA 254
                 57789*******************************999988766 PP

>> TPR_7  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.0    0.0026       4.7       1      21 [.     316     336 ..     316     338 .. 0.90
   2 ?    3.4   0.0     0.053        95       5      29 ..     581     605 ..     578     620 .. 0.89

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0026
       TPR_7   1 aLlnLarlysrlGdyeeAiel 21 
                 ++ +La++y+++ ++e+A++ 
  KHJ35431.1 316 TWARLAEVYVAMENWEDALTT 336
                 6789**************985 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 0.053
       TPR_7   5 LarlysrlGdyeeAielyeqsLalt 29 
                 L++l +rl +++eA e y+++L ++
  KHJ35431.1 581 LGSLAERLHHRSEAMEAYRACLSIR 605
                 89999***************99887 PP

>> TPR_8  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.6   0.0        10   1.8e+04      12      26 ..     215     229 ..     213     231 .. 0.83
   2 ?   -0.3   0.0      0.97   1.7e+03       3      25 ..     316     338 ..     315     340 .. 0.80
   3 ?    9.5   0.0   0.00068       1.2       5      31 ..     579     605 ..     575     608 .. 0.90

  Alignments for each domain:
  == domain 1  score: -3.6 bits;  conditional E-value: 10
                 HHTT-HHHHHHHHHH CS
       TPR_8  12 lklgdyeeAkeyyek 26 
                 +++g++ + +  +ek
  KHJ35431.1 215 QTTGRFTSGINLFEK 229
                 578999999999999 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.97
                 HHHHHHHHHHHTT-HHHHHHHHH CS
       TPR_8   3 ayynlgsiylklgdyeeAkeyye 25 
                  + +l+ +y  +++ e A  +++
  KHJ35431.1 316 TWARLAEVYVAMENWEDALTTLN 338
                 599*******9999777776665 PP

  == domain 3  score: 9.5 bits;  conditional E-value: 0.00068
                 HHHHHHHHHTT-HHHHHHHHHHHHHHH CS
       TPR_8   5 ynlgsiylklgdyeeAkeyyekaleld 31 
                   lgs+ + l    eA+e+y+ +l+++
  KHJ35431.1 579 EILGSLAERLHHRSEAMEAYRACLSIR 605
                 5699999******************97 PP

>> TPR_1  Tetratricopeptide repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.2   0.0    0.0053       9.5       3      21 ..     316     334 ..     315     339 .. 0.92
   2 ?    3.0   0.0     0.056     1e+02       4      30 ..     578     604 ..     575     606 .. 0.81

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0053
                 HHHHHHHHHHHTT-HHHHH CS
       TPR_1   3 alynlGnayfklgkydeAl 21 
                 ++ +l+ +y  ++++++Al
  KHJ35431.1 316 TWARLAEVYVAMENWEDAL 334
                 699***************9 PP

  == domain 2  score: 3.0 bits;  conditional E-value: 0.056
                 HHHHHHHHHHTT-HHHHHHHHHHHHHH CS
       TPR_1   4 lynlGnayfklgkydeAleyyekALel 30 
                 +  lG +  +l    eA e+y+ +L++
  KHJ35431.1 578 WEILGSLAERLHHRSEAMEAYRACLSI 604
                 556788888888889*********987 PP

>> DUF627  Protein of unknown function (DUF627)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00024      0.42       2      70 ..     242     307 ..     241     323 .. 0.88
   2 ?   -3.9   0.1       7.6   1.4e+04      82      98 ..     560     576 ..     559     577 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00024
      DUF627   2 AkdllargnhikALeiiedlisrhgedeksallhrlqGtifvklakktedpdvkfayllasvecfseav 70 
                 Ak +l   ++++A +++ ++i++   d    ++  +q++ ++k a + +++++k+ +l+ +++c+ +++
  KHJ35431.1 242 AKVFLMGNEEVQAVRVLHNSIKQSPMD---YVMLDTQAEFLLKKAMNPKSQKLKQEWLQMALGCADRST 307
                 555666677899*********999995...788899****************************99875 PP

  == domain 2  score: -3.9 bits;  conditional E-value: 7.6
      DUF627  82 elasqlgsklyYkkavk 98 
                 e+a+   ++++Ykk+++
  KHJ35431.1 560 EMAQFRAQQMQYKKSAE 576
                 56777778899999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (699 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.41
# Mc/sec: 5128.41
//
Query:       KHJ35432.1  [L=208]
Description: putative extracellular chitinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.5e-13   49.3   0.0    7.1e-13   49.0   0.0    1.2  1  Glyco_hydro_18  Glycosyl hydrolases family 18
  ------ inclusion threshold ------
       0.22   11.4   1.4       0.45   10.4   1.4    1.5  1  zf-RING_6       zf-RING of BARD1-type protein


Domain annotation for each model (and alignments):
>> Glyco_hydro_18  Glycosyl hydrolases family 18
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.0   0.0   7.9e-17   7.1e-13     249     312 .]      74     140 ..      39     140 .. 0.80

  Alignments for each domain:
  == domain 1  score: 49.0 bits;  conditional E-value: 7.9e-17
                     HHHHHHHHTEEEEEEEEETTTTEEEEEETT..EEEEE-SHHHHHHHH.HHHHHTTESEEEEETGGGS CS
                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxx RF
  Glyco_hydro_18 249 ykelkellkkakakrkydskakapyvydge..efvsyDdpksikaka.dyvkakglgGvmiWsldqD 312
                      + +++l ++a a++ +d++a+++y++d     f+++D++  i++k+ d+v a+glgGvm+Wsl qD
      KHJ35432.1  74 TPSISSLFQTAIANGITDEDAGGQYYFDRAnnLFWTWDTATLIARKFnDIVAARGLGGVMAWSLAQD 140
                     334555559999999*************9999*********************************99 PP

>> zf-RING_6  zf-RING of BARD1-type protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   1.4     5e-05      0.45      28      45 ..      57      74 ..      48      90 .. 0.80

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 5e-05
   zf-RING_6 28 hifcsncisdcfgsgcpv 45
                  +c nc    fgsgc  
  KHJ35432.1 57 PDYCNNCQGSAFGSGCQT 74
                459*************75 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (208 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       566  (0.031569); expected 358.6 (0.02)
Passed bias filter:                      414  (0.0230911); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1791.91
//
Query:       KHJ35433.1  [L=280]
Description: putative 26s proteasome regulatory subunit rpn12 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    7.3e-17   61.7   0.0    1.2e-16   60.9   0.0    1.4  1  CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family


Domain annotation for each model (and alignments):
>> CSN8_PSD8_EIF3K  CSN8/PSMD8/EIF3K family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.9   0.0   6.9e-21   1.2e-16       3     137 ..      98     242 ..      96     249 .. 0.88

  Alignments for each domain:
  == domain 1  score: 60.9 bits;  conditional E-value: 6.9e-21
  CSN8_PSD8_EIF3K   3 kaelytniLlkaLtqndladfrlllkrlpaaiqqs...........deeiqklltLetlLeeanyakfwstlksdd.lsadltadvagleelvR 84 
                      k ++++++Ll++Ltq d a f+++l+ l  + + +           d ++ + ++Le+ L+e+ y  +w+++ s + +s++++ + + l +++R
       KHJ35433.1  98 KNKITGLYLLLLLTQGDYAGFHTELECLELSSSAEqqnpgvtavesDRYLGYPIKLERWLMEGTYDLVWKAMASREvPSEEYSVFSEILISQIR 191
                      5789*******************9987765555555569*******************************9887653789************** PP

  CSN8_PSD8_EIF3K  85 eeiaklvgkaYesIsadvlaelLglssdeelekfvkevgWeldaatvivpfnp 137
                       eia+  ++aY ++ ++  ++lL l+s+  + +f+ ++gW + +    +p   
       KHJ35433.1 192 TEIANNSEQAYPCLPISSTKSLLFLESEGSVISFAQSRGWSIKDGWIYFP--V 242
                      **************************999*************76666566..3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (280 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       391  (0.0218082); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.21s 00:00:00.61 Elapsed: 00:00:00.35
# Mc/sec: 2391.39
//
Query:       KHJ35434.1  [L=370]
Description: hypothetical protein EV44_g3664 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.015   14.9   0.2      0.074   12.7   0.2    2.1  1  RVT_2     Reverse transcriptase (RNA-dependent DNA polymerase
       0.12   12.1   0.0       0.27   11.0   0.0    1.5  1  DUF3945   Protein of unknown function (DUF3945)


Domain annotation for each model (and alignments):
>> RVT_2  Reverse transcriptase (RNA-dependent DNA polymerase)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.2   8.2e-06     0.074       7      75 ..     120     187 ..     116     302 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 8.2e-06
       RVT_2   7 slPkdrkaigsrWvftkkkddlkevkykarlvaqGfsqkagedydevfaPvirldsvrLllalaaeeel 75 
                 + P + +   + +v  +k+   ++   k+rlv+q ++         + +P ++  s r++lalaa+  +
  KHJ35434.1 120 DVPTNSRIFKTSFVDDIKHRGTEKEYTKSRLVVQMYKDDEKNSV-LTQSPNLQRVSQRIILALAAMLPW 187
                 7899**************999999999*********98766554.6889999999**********9887 PP

>> DUF3945  Protein of unknown function (DUF3945)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0     3e-05      0.27      27      52 ..     296     321 ..     291     323 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 3e-05
     DUF3945  27 pdeikgvkLteeqkqdLreGkavlle 52 
                 + eik+ k++++++++L +G +++ +
  KHJ35434.1 296 KTEIKKAKMNAKDRETLTKGNPLKFN 321
                 579*******************9876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       535  (0.0298399); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.36
# Mc/sec: 3054.22
//
Query:       KHJ35435.1  [L=198]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (198 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       576  (0.0321267); expected 358.6 (0.02)
Passed bias filter:                      485  (0.0270511); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.42u 0.22s 00:00:00.64 Elapsed: 00:00:00.38
# Mc/sec: 1549.05
//
Query:       KHJ35436.1  [L=457]
Description: putative exonuclease v [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   8.1e-123  410.5   0.2     1e-122  410.2   0.2    1.1  1  Exo5      Exonuclease V - a 5' deoxyribonuclease
     0.0029   17.5   0.2      0.059   13.3   0.2    2.7  2  PDDEXK_1  PD-(D/E)XK nuclease superfamily
     0.0099   16.0   3.0        1.4    9.0   0.0    2.7  3  Cas_Cas4  Domain of unknown function DUF83


Domain annotation for each model (and alignments):
>> Exo5  Exonuclease V - a 5' deoxyribonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  410.2   0.2  1.7e-126    1e-122       1     368 []      66     432 ..      66     432 .. 0.91

  Alignments for each domain:
  == domain 1  score: 410.2 bits;  conditional E-value: 1.7e-126
        Exo5   1 splerfrkkpkkklsVtdLvspaWCElqyeYtLtklgrkkrtkamkrGskvHkklEeevhttvevevttkedkwglriwnviqgLrtLretGltRElev 99 
                 spl rfr++p+k l+VtdLv+paWCE++y+Y L+k+g +k+t amk+G+++H+klE e+ht v+++++ kedk+glriwnviqgLrtLre+G tREl+v
  KHJ35436.1  66 SPLCRFRSRPRKGLTVTDLVTPAWCEMKYWYVLSKHGVQKETVAMKQGTRIHEKLESEIHTFVPIKLHIKEDKLGLRIWNVIQGLRTLRECGRTRELQV 164
                 89************************************************************************************************* PP

        Exo5 100 wGlvdgelvnGvIDelslenpdeeleeellesr....kkksadvekkkaalseeqesikdylessskkkrkiyitDvKTrgskslpsssqvrptkiQlm 194
                 wG+vdg+lv G IDels+++ d + +  + +s+    k+ s++++    ++ +e +s+kd  ++ +++++kiyi+DvKTr+ ++lp++ +++ptk+Qlm
  KHJ35436.1 165 WGTVDGQLVGGKIDELSYQCADMNNNGLIETSKpdeiKS-STNKTPDVISIIDEDTSLKDLNKNCQSQNQKIYICDVKTRSVQRLPTEISFKPTKYQLM 262
                 *********************995554444444555333.44444445556666779999999999********************************* PP

        Exo5 195 lYrrlLselaadkldiesvferydldpdepfsdaflaqigkledevfeeldseaeseseeeeeveassssqdslsellkyntLssllkllkkelaltfl 293
                 lY+r++s+l+++kldi+ + ++y+ldp+++fsd fl+q+ +le++  ++    +e+es  ++ v+   +  + l  +l++ +Lssl++++ +e+++tf+
  KHJ35436.1 263 LYHRFISNLITGKLDIQILTNHYKLDPERTFSDLFLTQVCSLEESPLRSK---SEEES-ISALVNYLPHIPEPLPMILANYNLSSLWHFMLSEFQKTFP 357
                 *******************************************8544333...22222.22445555667777899999******************** PP

        Exo5 294 egasslsklltveYrsrkegevlgsksflvdeetLkeylaeelawWrgeReaegVeieeafkCrsCeFaeeCeWr 368
                 +g +sls++l++e+rs++ g+++g+k+fl+++  L++yl+ +++wW+geR++ gV+++ea+kC+sC Fae CeWr
  KHJ35436.1 358 DGVTSLSDILKAEFRSSNLGNIIGTKTFLMNDVDLTNYLNYTMEWWKGERAPLGVPANEAYKCKSCSFAEICEWR 432
                 **************************************************************************9 PP

>> PDDEXK_1  PD-(D/E)XK nuclease superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.0     0.082   4.9e+02       3      45 ..      80     121 ..      78     165 .. 0.73
   2 !   13.3   0.2   9.8e-06     0.059     141     255 .]     232     430 ..     223     430 .. 0.71

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.082
    PDDEXK_1   3 SvsrletfleCplrfflr.yllgl.reeeeleapdlGtlvHaale 45 
                 +v+ l t + C +++ +  ++ g+ +e+ ++++   Gt +H+ le
  KHJ35436.1  80 TVTDLVTPAWCEMKYWYVlSKHGVqKETVAMKQ---GTRIHEKLE 121
                 677788888899998774134444444555555...*****9998 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 9.8e-06
    PDDEXK_1 141 egelriiDyKtgsappkskelaelkegl...QlllYllalaeg.eelkeegepagalylrlee.pkvk...........................deev 207
                 +++++i D Kt s +  ++e   ++  +   Ql+lY   + +  + ++    ++++l  +++  p+ +                               
  KHJ35436.1 232 NQKIYICDVKTRSVQRLPTE---ISFKPtkyQLMLYHRFISNLiTGKL----DIQILTNHYKLdPERTfsdlfltqvcsleesplrskseeesisA--- 320
                 45799999999996655555...4444455699999999999955555....45555555433344446778888888887777766654443330... PP

    PDDEXK_1 208 vkkm................................................................alteeeleallqeleelaeeilag.efparp 241
                                                                                       ++ +l+++l++  e+++  +a+  +pa++
  KHJ35436.1 321 ---LvnylphipeplpmilanynlsslwhfmlsefqktfpdgvtslsdilkaefrssnlgniigtktfLMNDVDLTNYLNYTMEWWKGERAPlGVPANE 416
                 ...1566666666666666666666666666777777777777777777777788888888888888788888899999999999999999999***** PP

    PDDEXK_1 242 skkCeyCpyksvCr 255
                   kC++C+++++C+
  KHJ35436.1 417 AYKCKSCSFAEICE 430
                 *99**********6 PP

>> Cas_Cas4  Domain of unknown function DUF83
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.0   0.0   0.00024       1.4       6      60 ..      85     139 ..      80     151 .. 0.83
   2 ?   -2.1   0.0      0.63   3.8e+03      62      62 ..     230     230 ..     180     269 .. 0.56
   3 !    6.7   0.2    0.0012       7.1     145     160 ..     414     429 ..     401     431 .. 0.86

  Alignments for each domain:
  == domain 1  score: 9.0 bits;  conditional E-value: 0.00024
    Cas_Cas4   6 qyyliCkrklwlisheitleensetvelGkllheesyerekkevelsesikiDvv 60 
                    + C+ k w++  +  ++++   +++G  +he+ +++ ++ v ++ +ik D +
  KHJ35436.1  85 VTPAWCEMKYWYVLSKHGVQKETVAMKQGTRIHEKLESEIHTFVPIKLHIKEDKL 139
                 55578*****************************999987777777557777765 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 0.63
    Cas_Cas4  62 k 62 
                 +
  KHJ35436.1 230 S 230
                 2 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.0012
    Cas_Cas4 145 vkkkkiCkkCayaelC 160
                 ++++ +Ck+C++ae+C
  KHJ35436.1 414 ANEAYKCKSCSFAEIC 429
                 566789********** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       582  (0.0324614); expected 358.6 (0.02)
Passed bias filter:                      379  (0.0211389); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.52u 0.21s 00:00:00.73 Elapsed: 00:00:00.72
# Mc/sec: 1927.20
//
Query:       KHJ35437.1  [L=457]
Description: putative l-fucose permease glucose galactose transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.6e-18   65.6  36.2    5.8e-18   64.9  26.0    2.0  2  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.9  26.0   3.3e-22   5.8e-18       4     320 ..      36     357 ..      33     366 .. 0.78
   2 !    5.9   6.5   0.00029       5.3     214     297 ..     338     423 ..     337     429 .. 0.61

  Alignments for each domain:
  == domain 1  score: 64.9 bits;  conditional E-value: 3.3e-22
       MFS_1   4 aaflsalarsilgpalplalaedlgispseigllltlyalgaavaslpl.GrlsdrfGrrrvlllglllfalglllllfa....sslwlllvlrvlqGl 97 
                 ++fl ++a+++l ++ p + +++l+i+ps  + l ++y+ ++++  + + G++  +fG r ++++gl ++++g+l+++ +    +s+  ++ + ++ G+
  KHJ35437.1  36 LFFLWGFAYGLLDVLNP-HFQKSLHITPSMSSGLSAAYFGAYFLCPPTFsGFILRNFGFRVTFMCGLGVLSIGCLCMW-PsgmkHSFGGFCGSMFVVGM 132
                 689999***********.******************************98999999*****************77777.335645555*********** PP

       MFS_1  98 gagalfpagaaliadwfpkeergraigllsagfslGailgpllgg..llasslg.......Wravfyilaivsllafvlfllllpeepperkrkspkee 187
                 g ++l +a+  ++a   p++     + l++a  ++G+  +pll++  ++a  +         ++v++ +  + + +  +fl+ ++  p     + +++e
  KHJ35437.1 133 GLSTLETAADPFLAICGPPRYSEIRLNLAQAVQAVGSFAAPLLASrvFFANTVDdneglknVQWVYLGVSCFVVCL--IFLFAIVPMPEVTDEDMGIQE 229
                 *********************************************6555544449999999777765555444444..444777777777777777777 PP

       MFS_1 188 ekgtgpaplvpawkallkdp.vlw.......illialllfffgfsglltllplylqevlglsglllaglllallalvgailallagrlsdr..lgrrrr 276
                             +++ +++p ++w       +++  +++++  + ++ +++ +   e  g s   +++ ++a+++ ++a+ ++lag l++   +++r++
  KHJ35437.1 230 ------------IEIAKHNPgPFWkqtnlflAVWSQFCYVGSQVVLANYFVNF--CEEAGKS-PSTSSNIFAAAQGLFAFNRFLAGGLMTFpaFQPRII 313
                 ............55555555566777753334444444454444446666666..9******.4555556*******************8767777888 PP

       MFS_1 277 lllallllllaalglallavtssavllllvlvliGf.glgfvfps 320
                 l + l+l ++++l+ a++++  +++++l++ +++   ++ ++f++
  KHJ35437.1 314 LAIYLFLSFVFTLAAAFTNNN-TSIIVLCLAICFESaCFPTIFSL 357
                 888888888888888888887.77777776666555565555554 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.00029
       MFS_1 214 ialllfffgfsglltllplylqevlgls..glllaglllallalvgailallagrlsdr...lgrrrrlllallllllaalglallavt 297
                 i+l+l+ ++ s+ + ++++     +gl+  +  ++g l+ ++  +ga+l ++ag+++++   +g++r+  la+++ +++++   + +++
  KHJ35437.1 338 IVLCLAICFESACFPTIFS--LGLRGLGryT-KIGGSLIVAAIGGGAVLPPIAGAVATKmqrIGSKRPFHLAMIVPTIGFIVAWIYPLY 423
                 6677777666667777777..4555555544.777777777777778888999999999444444555555555555555555555544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       638  (0.0355848); expected 358.6 (0.02)
Passed bias filter:                      315  (0.0175693); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.26s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 3232.11
//
Query:       KHJ35438.1  [L=86]
Description: hypothetical protein EV44_g3336 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (86 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       332  (0.0185175); expected 358.6 (0.02)
Passed bias filter:                      216  (0.0120475); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.41
# Mc/sec: 636.45
//
Query:       KHJ35439.1  [L=558]
Description: hypothetical protein EV44_g6136 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
     0.0058   16.5   0.1      0.021   14.7   0.1    2.0  1  F-box-like  F-box-like


Domain annotation for each model (and alignments):
>> F-box-like  F-box-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.1   1.2e-06     0.021       5      36 ..      32      65 ..      28      69 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.2e-06
  F-box-like  5 PdEiLlqIFsyL.p.psdLlrlalVCrrWrrval 36
                P EiL  I s L +  sdL++lalV ++ r++a+
  KHJ35439.1 32 PVEILTAIISELySnKSDLASLALVNSDCRQLAR 65
                9*********7765266********999999985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (558 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       291  (0.0162307); expected 358.6 (0.02)
Passed bias filter:                      247  (0.0137766); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.20s 00:00:00.69 Elapsed: 00:00:00.36
# Mc/sec: 4612.48
//
Query:       KHJ35440.1  [L=228]
Description: putative upf0480 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.5e-26   90.8   0.0    9.3e-26   90.4   0.0    1.2  1  DUF2012          Protein of unknown function (DUF2012)
  ------ inclusion threshold ------
      0.075   13.3   0.0       0.14   12.4   0.0    1.5  1  CarboxypepD_reg  Carboxypeptidase regulatory-like domain
       0.17   11.7   0.0        0.3   10.9   0.0    1.4  1  fn3_3            Polysaccharide lyase family 4, domain II


Domain annotation for each model (and alignments):
>> DUF2012  Protein of unknown function (DUF2012)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.4   0.0   1.6e-29   9.3e-26       4     123 .]      35     167 ..      32     167 .. 0.95

  Alignments for each domain:
  == domain 1  score: 90.4 bits;  conditional E-value: 1.6e-29
     DUF2012   4 lnllantrvlLdsgqqrkfkalvrrDGsFifrdlpegsYlLevespeyvFepyrVdvk...dkgkakasklrivetaevnvvdesgne........... 88 
                  +l++ t+++L + +q  ++a++++ G+F+f ++  gsYl e++ + ++F+p+rVdvk   d   +++++++++ t+++n +d++g             
  KHJ35440.1  35 SKLPPSTHATLTTLSQ-IYSAPLQEKGNFNFPNVTTGSYLFEINCHAFFFAPLRVDVKeakDDLHGQQEVVEVWGTFRGNEWDNKGETvivqtkdegrn 132
                 57899******77777.9****************************************9988899999****************************998 PP

     DUF2012  89 esyplkikavarreyyeerekfsilsLlknPmvLl 123
                      +++++a ++y++er+ fs+l++lknPm+L+
  KHJ35440.1 133 KLFIFEAQMLAAKNYLTERAHFSPLNMLKNPMILM 167
                 777889999*************************9 PP

>> CarboxypepD_reg  Carboxypeptidase regulatory-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   2.4e-05      0.14      15      56 ..      41      78 ..      26      96 .. 0.77

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 2.4e-05
  CarboxypepD_reg 15 agatVtvtnadtgtvastttdadGafrlrglppgtysvtvsa 56
                     ++at+t      ++ +s+   ++G+f+++++++g+y  ++  
       KHJ35440.1 41 THATLTTL----SQIYSAPLQEKGNFNFPNVTTGSYLFEINC 78
                     45555555....68999999****************998865 PP

>> fn3_3  Polysaccharide lyase family 4, domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0     5e-05       0.3      24      47 ..      49      72 ..      25      82 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 5e-05
       fn3_3 24 ayQYwteadssgsftipnVkpGtY 47
                +  Y + ++++g+f +pnV +G+Y
  KHJ35440.1 49 SQIYSAPLQEKGNFNFPNVTTGSY 72
                556999999*************** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (228 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       438  (0.0244297); expected 358.6 (0.02)
Passed bias filter:                      397  (0.0221429); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.42u 0.21s 00:00:00.63 Elapsed: 00:00:00.36
# Mc/sec: 1884.34
//
Query:       KHJ35441.1  [L=83]
Description: hypothetical protein EV44_g0402 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-05   25.4   8.7    1.5e-05   25.1   8.7    1.1  1  MARVEL    Membrane-associating domain


Domain annotation for each model (and alignments):
>> MARVEL  Membrane-associating domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   8.7   8.2e-10   1.5e-05      86     144 .]       2      51 ..       1      51 [. 0.95

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 8.2e-10
      MARVEL  86 aallwlvafialaaglrdiscafesnqysasltvrcgqaqaavafgflavllfaasavl 144
                 ++l+++++fial   ++            ++++++c++a a+++f++++++l+++s+ l
  KHJ35441.1   2 NVLFYFAGFIALSTFISK---------LLFCRGSVCSAARADAVFAAFSWALWTGSTAL 51 
                 689***************.........899*************************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (83 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       285  (0.015896); expected 358.6 (0.02)
Passed bias filter:                      164  (0.00914719); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.34u 0.25s 00:00:00.59 Elapsed: 00:00:00.39
# Mc/sec: 635.57
//
Query:       KHJ35442.1  [L=153]
Description: putative mmc protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        1.4    8.4   3.8          4    6.9   3.8    1.6  1  GCHY-1    Type I GTP cyclohydrolase folE2


Domain annotation for each model (and alignments):
>> GCHY-1  Type I GTP cyclohydrolase folE2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    6.9   3.8   0.00022         4     122     156 ..      18      50 ..      10      73 .. 0.75

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.00022
                 EEEEEE..TTEEEEEEEEEEEEEEE-HHHHHHS.. CS
      GCHY-1 122 tleaelerkeevkltvgvevpvttlCPCskeisre 156
                 t++a+ ++  ++ ++ +v+  +tt CP s e++ +
  KHJ35442.1  18 TFNATNDH--STVYITEVHTAYTTYCPTSTELVYN 50 
                 33333322..5888999**************9855 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       798  (0.0445089); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        32  (0.00178482); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.41u 0.25s 00:00:00.65 Elapsed: 00:00:00.41
# Mc/sec: 1117.44
//
Query:       KHJ35443.1  [L=938]
Description: hypothetical protein EV44_g6378 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (938 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       668  (0.0372581); expected 358.6 (0.02)
Passed bias filter:                      301  (0.0167884); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.26s 00:00:00.93 Elapsed: 00:00:00.44
# Mc/sec: 6405.65
//
Query:       KHJ35444.1  [L=444]
Description: hypothetical protein EV44_g4956 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-26   93.7   0.6      1e-26   93.7   0.6    3.2  3  RAC_head    Ribosome-associated complex head domain
    5.4e-20   71.3   1.2    2.7e-19   69.0   1.2    2.3  1  DnaJ        DnaJ domain
  ------ inclusion threshold ------
        3.5    5.4  10.9          5    4.9  10.9    1.1  1  V_ATPase_I  V-type ATPase 116kDa subunit family
        5.4    5.0  11.5          8    4.4  11.5    1.2  1  Hid1        High-temperature-induced dauer-formation protein


Domain annotation for each model (and alignments):
>> RAC_head  Ribosome-associated complex head domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.1       3.1   1.4e+04      16      19 ..     127     130 ..     114     160 .. 0.56
   2 ?   -8.1  10.4         4   1.8e+04      57      91 ..     290     320 ..     261     340 .. 0.51
   3 !   93.7   0.6   2.3e-30     1e-26       1      95 [.     346     439 ..     346     442 .. 0.98

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 3.1
                 HHHH CS
    RAC_head  16 ralr 19 
                 ++lr
  KHJ35444.1 127 KVLR 130
                 2222 PP

  == domain 2  score: -8.1 bits;  conditional E-value: 4
                 HHHHHHHHHTT---HHHHHHHHHHHHHHHHHTTSS CS
    RAC_head  57 eLaelaekleaakdaeevkavfkeevkelveagkl 91 
                  +++++++ +    a + k+ +++e++e +e++ +
  KHJ35444.1 290 RIKKFRQAAT----ATKNKKRLEREAAEKSEREAI 320
                 3333333333....333334444444444444444 PP

  == domain 3  score: 93.7 bits;  conditional E-value: 2.3e-30
                 XXXXXXXX-HHHHHHHHHHHHHHHTGGGSSSS--.HHHHHHHHHHHHHHHHH--HHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHTTSS-GGG CS
    RAC_head   1 KKaKeaaKkalKKekralrgavkdanYFadgeaekakvidkvLedvdllieklddeeLaelaekleaakdaeevkavfkeevkelveagklkeek 95 
                 KK KeaaK+a+KK++r+l+g+vk+anYF++g+ + a+ idk+L  v+l+  k+d++e a+la+kl++ k + e+k+v+++evk+lv++gk++e++
  KHJ35444.1 346 KKSKEAAKAAVKKNRRVLKGSVKEANYFVEGDPP-ANIIDKILGAVELIQGKIDADETAALASKLTGLKISGEIKQVWSDEVKRLVSSGKINEGD 439
                 9********************************9.999*****************************************************9987 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.0   1.2   6.1e-23   2.7e-19       1      63 []     101     168 ..     101     168 .. 0.94

  Alignments for each domain:
  == domain 1  score: 69.0 bits;  conditional E-value: 6.1e-23
                 HHHHHHTSSTT...G-HHHHHHHHHHHHHHHSTTTS..CCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ   1 dyYeiLgvskd...asedeIkkaYrklalkyHPDkn..pkdpeaeekFkeineAyevLsdpekRkqYD 63 
                 d+Y++Lg+sk    a++++Ik+a+rk++l++HPDk+  ++++e +  Fk+i++A+evLsdp kR+q+D
  KHJ35444.1 101 DHYAVLGLSKYrykATDEQIKRAHRKKVLRHHPDKKaaAGNTEDDSFFKCIQKATEVLSDPVKRRQFD 168
                 89********98889*******************886678889************************9 PP

>> V_ATPase_I  V-type ATPase 116kDa subunit family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.9  10.9    0.0011         5      52     173 ..     258     405 ..     214     411 .. 0.44

  Alignments for each domain:
  == domain 1  score: 4.9 bits;  conditional E-value: 0.0011
  V_ATPase_I  52 avikeeeaeesleapeekeldeleeelekleeelkelne......nleklkkelnelvelkavlekakefleeeeeeeeeeeseeeeeekeeeeeeese 144
                 +++k+++a +++++++ ++l +l +e    +e++k++++      n+++l++e  e  e +a+  + ++  +e++e       +ee++++ +e++++s+
  KHJ35444.1 258 MERKNNNARKKKKNEDVARLRKLVDEAMAGDERIKKFRQaatatkNKKRLEREAAEKSEREAIAAEKSRKDAEAKE-------SEEKAKALREQNKKSK 349
                 1111111122222333333333333333333333333330000003333333333333333333332222222111.......1111111111111111 PP

  V_ATPase_I 145 eeeeeelleeeee....................................lsfvaGvikrekveaf 173
                 e  +        +                                    ++ + G i++++++a+
  KHJ35444.1 350 EA-A--------KaavkknrrvlkgsvkeanyfvegdppaniidkilgaVELIQGKIDADETAAL 405
                 11.1........01122233345556667778888888888877777777778888888887776 PP

>> Hid1  High-temperature-induced dauer-formation protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.4  11.5    0.0018         8     572     694 ..     236     358 ..     215     409 .. 0.51

  Alignments for each domain:
  == domain 1  score: 4.4 bits;  conditional E-value: 0.0018
        Hid1 572 rnltlesaseeiersne...sarldsideeeeenssessrieesrsesrspslsevpelksslaitddeskaereksatessssqavs........... 656
                 r+++++ ++  +  +ne   ++r ++ ++++ +++++++              ++ ++l ++  ++d+  k+ r+  + ++++++++            
  KHJ35444.1 236 RSFEYQDEE--VPDDNEnrdQKRHMERKNNNARKKKKNED------------VARLRKLVDEAMAGDERIKKFRQAATATKNKKRLEReaaeksereai 320
                 444443333..22222211323333333333333333333............33333444444444444444443333333333333322222221111 PP

        Hid1 657 qlremsekarakesaesteesrqesatskkspsgmsqs 694
                 ++++  + a+akes+e+ +  r+++++sk+ +++ +++
  KHJ35444.1 321 AAEKSRKDAEAKESEEKAKALREQNKKSKEAAKAAVKK 358
                 22344444444444444444444444444444444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (444 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2607  (0.145407); expected 358.6 (0.02)
Passed bias filter:                      612  (0.0341346); expected 358.6 (0.02)
Passed Vit filter:                       131  (0.0073066); expected 17.9 (0.001)
Passed Fwd filter:                        30  (0.00167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.86u 0.30s 00:00:01.15 Elapsed: 00:00:00.44
# Mc/sec: 3029.47
//
Query:       KHJ35445.1  [L=378]
Description: putative sterol 24-c-methyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.7e-27   94.4   0.2    6.7e-27   93.6   0.2    1.4  1  Sterol_MT_C      Sterol methyltransferase C-terminal
    4.8e-22   78.4   0.0    8.4e-22   77.6   0.0    1.4  1  Methyltransf_11  Methyltransferase domain
    1.7e-20   73.5   0.0    3.1e-20   72.7   0.0    1.4  1  Methyltransf_25  Methyltransferase domain
      1e-18   67.6   0.0    1.5e-18   67.0   0.0    1.3  1  Methyltransf_31  Methyltransferase domain
    9.9e-12   44.7   0.0    1.6e-11   44.0   0.0    1.2  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
    1.3e-11   44.3   0.0    1.9e-11   43.8   0.0    1.2  1  CMAS             Mycolic acid cyclopropane synthetase
    9.8e-11   41.8   0.0    1.5e-10   41.1   0.0    1.3  1  Methyltransf_23  Methyltransferase domain
    1.2e-10   42.0   0.0    2.9e-10   40.8   0.0    1.7  1  Methyltransf_12  Methyltransferase domain
    0.00028   20.5   0.0    0.00046   19.8   0.0    1.3  1  MTS              Methyltransferase small domain
    0.00029   20.3   0.0    0.00056   19.4   0.0    1.4  2  PrmA             Ribosomal protein L11 methyltransferase (Prm
    0.00042   19.0   0.0    0.00062   18.5   0.0    1.2  1  Methyltransf_29  Putative S-adenosyl-L-methionine-dependent m
     0.0006   19.4   0.0    0.00099   18.7   0.0    1.3  1  Methyltransf_15  RNA cap guanine-N2 methyltransferase
     0.0016   18.2   0.0     0.0027   17.5   0.0    1.2  1  PCMT             Protein-L-isoaspartate(D-aspartate) O-methyl
     0.0018   18.2   0.6     0.0033   17.4   0.0    1.7  2  Methyltransf_32  Methyltransferase domain
     0.0019   17.8   0.0     0.0032   17.1   0.0    1.3  1  MetW             Methionine biosynthesis protein MetW
     0.0023   17.3   0.0     0.0037   16.6   0.0    1.3  1  Methyltransf_2   O-methyltransferase domain
  ------ inclusion threshold ------
      0.013   14.9   0.0      0.022   14.2   0.0    1.3  1  TehB             Tellurite resistance protein TehB
      0.014   14.5   0.0      0.021   13.9   0.0    1.2  1  RrnaAD           Ribosomal RNA adenine dimethylase
      0.021   15.8   0.0       0.13   13.3   0.0    2.1  2  Methyltransf_24  Methyltransferase domain
      0.024   14.2   0.0      0.046   13.3   0.0    1.4  1  NodS             Nodulation protein S (NodS)
      0.086   12.3   0.0       0.18   11.2   0.0    1.6  1  Methyltransf_4   Putative methyltransferase
       0.15   12.3   0.0       0.35   11.1   0.0    1.5  1  DRE2_N           Fe-S cluster assembly protein DRE2 N-terminu


Domain annotation for each model (and alignments):
>> Sterol_MT_C  Sterol methyltransferase C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.6   0.2   8.2e-30   6.7e-27       2      66 .]     313     377 ..     312     377 .. 0.98

  Alignments for each domain:
  == domain 1  score: 93.6 bits;  conditional E-value: 8.2e-30
  Sterol_MT_C   2 tvfrmtkvGrfithnlvkvleflglapkGtqkvaefLekAadsLvaGGkegiFTPmylfvaRKPl 66 
                  t+ rmtkvGr ith +v++le lg+ap Gt+k+a++++ Aad+LvaG+keg+FTPmyl++++KPl
   KHJ35445.1 313 TIARMTKVGRGITHRIVGILENLGIAPGGTRKTADSMAVAADCLVAGAKEGLFTPMYLMIGKKPL 377
                  789*************************************************************6 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.6   0.0     1e-24   8.4e-22       1      94 [.     132     228 ..     132     230 .. 0.97

  Alignments for each domain:
  == domain 1  score: 77.6 bits;  conditional E-value: 1e-24
                      EEET-TTSHHHHHHHHTT.SEEEEEES-HHHHHHHHHHCCHHT-..EEEETTEECCCTSS-TT-EEEEEEES-CCC-CCHHHHHHHHHHHEEEE CS
  Methyltransf_11   1 LdvGcGtGrlaealakrg.arvvgvDlskemlklakekaseegl..kvefvvadaeklpfednsfDlvvssevlhhvedpekalkeiaRvLkpg 91 
                      LdvGcG G  a+++ak   a+++g++ +++++++a + a++egl  +++fv++d+ ++ f+dnsfD v++ e+  h   +e++ +ei RvLkpg
       KHJ35445.1 132 LDVGCGVGGPAREIAKFTgAHITGLNNNDYQIERATRYAQKEGLsnQLSFVKGDFMQMSFPDNSFDSVYAIEATVHASSLEQVYREIFRVLKPG 225
                      8**************8778***************************9*********************************************** PP

                      EEE CS
  Methyltransf_11  92 Gll 94 
                      G++
       KHJ35445.1 226 GTF 228
                      *87 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.7   0.0   3.8e-23   3.1e-20       1      97 []     131     226 ..     131     226 .. 0.95

  Alignments for each domain:
  == domain 1  score: 72.7 bits;  conditional E-value: 3.8e-23
                      EEEET-TTSHHHHHHHCTSTSSEEEEEESSHHHHHHHHHHHHHTTT..TEEEEESBCCGBSSSTTTEEEEEEESTGGGSSHHHHHHHHHHHHHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrlgkakvtgvDiseemleaareraeeegl..nvefvqgdaedlpfedgsfDlvvssgalhhlsdedlekalkeiarv 92 
                      vLd+GcG G  ++++ak  g a++tg+  ++ ++e+a + a++egl  +++fv+gd+ +++f+d+sfD v+++ a  h   + le++++ei+rv
       KHJ35445.1 131 VLDVGCGVGGPAREIAKFTG-AHITGLNNNDYQIERATRYAQKEGLsnQLSFVKGDFMQMSFPDNSFDSVYAIEATVH--ASSLEQVYREIFRV 221
                      9***************9987.***************************************************988444..45799********* PP

                      EEEEE CS
  Methyltransf_25  93 LkpgG 97 
                      LkpgG
       KHJ35445.1 222 LKPGG 226
                      ****9 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.0   0.0   1.9e-21   1.5e-18       2     109 ..     126     230 ..     125     272 .. 0.90

  Alignments for each domain:
  == domain 1  score: 67.0 bits;  conditional E-value: 1.9e-21
  Methyltransf_31   2 dkglrvlDlGCGtGeltfelaeelgpkaevvGiDiseeaielArenaqklgld.nveFeqgdieeleklledekfDlilsnevlnaladpdkil 94 
                      +++ +vlD+GCG G  + e+a   +++a+++G+ ++   ie+A+  aqk gl+  ++F +gd+ +++  + d++fD + + e+  + +++++++
       KHJ35445.1 126 NEADKVLDVGCGVGGPAREIA--KFTGAHITGLNNNDYQIERATRYAQKEGLSnQLSFVKGDFMQMS--FPDNSFDSVYAIEATVHASSLEQVY 215
                      67889****************..5789**************************88************..************************* PP

  Methyltransf_31  95 eeiervlkpggilli 109
                      +ei+rvlkpgg + +
       KHJ35445.1 216 REIFRVLKPGGTFGV 230
                      ***********9965 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.0   0.0   1.9e-14   1.6e-11      44     153 ..     124     232 ..     112     242 .. 0.88

  Alignments for each domain:
  == domain 1  score: 44.0 bits;  conditional E-value: 1.9e-14
                      -S--TTEEEEES-TT-HHHHHHHHHHHHHHEEEEEES-HHHHHHHHHHHHHHTSS.TEEEEE--TTT-TTS-T-EEEEEEES-GGG-S-HHHHH CS
  Ubie_methyltran  44 avkrgakvlDvagGtgDlafklsdsvgekgkvvvlDinenmLkvgekklkeegki.nieflqanaeeLpfeddsfDvvtvsfGlrnvtDklkaL 136
                      +  ++ kvlDv +G g  a ++++  g+  ++++l+ n+  ++ + + +++eg + ++ f++++ +++ f d+sfD+v         +  +++ 
       KHJ35445.1 124 GINEADKVLDVGCGVGGPAREIAKFTGA--HITGLNNNDYQIERATRYAQKEGLSnQLSFVKGDFMQMSFPDNSFDSVYAIEATVHASSLEQVY 215
                      567788*****************99987..6899*******************9989*******************865444555678899*** PP

                      HHHHHHEEEEEEEEEEE CS
  Ubie_methyltran 137 keayrvlkpGGrlvvle 153
                      +e++rvlkpGG++ v e
       KHJ35445.1 216 REIFRVLKPGGTFGVYE 232
                      ************99887 PP

>> CMAS  Mycolic acid cyclopropane synthetase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.8   0.0   2.4e-14   1.9e-11       9     198 ..      77     262 ..      69     292 .. 0.78

  Alignments for each domain:
  == domain 1  score: 43.8 bits;  conditional E-value: 2.4e-14
                 HHHHHHTS-HHHHCTTS-TT---S----SSTT--HHHHHHHHHHHHHTTTT--TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHT CS
        CMAS   9 nikahYDlsndffalfldptmtYsCAyferddmtLeeAqlaKldlileklelkpGmtlLdiGcGWGslvrraverydvkvvglTlSkeqaklakkrvde 107
                   ++ Y l+ d+++   +++  +    + ++     +A  +  + +  k+++++ +++Ld+GcG G+ +r+ ++  ++++ gl   + q ++a +  ++
  KHJ35445.1  77 LTRQYYNLGTDLYEYGWGQSFHFCRFAYGEPFY---QAIARHEHYLAAKIGINEADKVLDVGCGVGGPAREIAKFTGAHITGLNNNDYQIERATRYAQK 172
                 567889999999999999998887666666654...788888889999*************************************************** PP

                 S-SSS-EEEEES-GGG---...--SEEEEES-GGGTSGGGHHHHHHHHHHHS-TT-EEEEEEEEE--HHHHHCTTCCCHHHHHHTSTTS---BH CS
        CMAS 108 ldlerkvevklldyedlde...kvdrvvsvgafehvgkenydtffkklkkllkedGllllhtitslhkkelaerglklkfidkeiFPgGelpsi 198
                 ++l+++ +    d+ +++     +d+v +++a+     +++++ +++++++lk++G++ +    +++k  + +++ +   i+  i  g  ++++
  KHJ35445.1 173 EGLSNQLSFVKGDFMQMSFpdnSFDSVYAIEATV--HASSLEQVYREIFRVLKPGGTFGVYEWLMTDKYDNDNQHHR--EIRLGIEQGDGIANM 262
                 ***************9976334677777777654..467899****************9999988888777766543..455555555444444 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.1   0.0   1.9e-13   1.5e-10      17     132 ..     120     245 ..     103     282 .. 0.78

  Alignments for each domain:
  == domain 1  score: 41.1 bits;  conditional E-value: 1.9e-13
  Methyltransf_23  17 lpk..lraggrvLdiGcGtGillevlren.gfsvtgvDlspeaveiae.........kakkaqkdqfdeqeaaepqgkfdlIvlrevlehvpdp 98 
                      ++k   ++  +vLd+GcG+G  +++++++ g+++tg   ++ ++e+a          +    +k  f  ++ ++p+++fd ++++e + h  ++
       KHJ35445.1 120 AAKigINEADKVLDVGCGVGGPAREIAKFtGAHITGLNNNDYQIERATryaqkeglsNQLSFVKGDF--MQMSFPDNSFDSVYAIEATVHASSL 211
                      44444577889*********999999998899**************977777777653333333333..58899******************** PP

  Methyltransf_23  99 pellrqiatllkpgGylllseplaslkedrllld 132
                      + + r i++ lkpgG + + e+l  +k d++ ++
       KHJ35445.1 212 EQVYREIFRVLKPGGTFGVYEWLMTDKYDNDNQH 245
                      ****************999998887776666555 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.8   0.0   3.5e-13   2.9e-10       1      99 []     132     228 ..     132     228 .. 0.88

  Alignments for each domain:
  == domain 1  score: 40.8 bits;  conditional E-value: 3.5e-13
  Methyltransf_12   1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg.ssfDlvvasnvlhhlkdirevldnirklL 93 
                      L++GcG+G  +r++++   ++++tg+  +  +i  ++++ a++e+++ n++ + + d  + + + +sfD v+a+++  h   +++v ++i ++L
       KHJ35445.1 132 LDVGCGVGGPAREIAKF-TGAHITGLNNNDYQI-ERATRYAQKEGLS-NQLSFVKGDFMQMSFPdNSFDSVYAIEATVHASSLEQVYREIFRVL 222
                      8*************776.***************.7777888877655.677777777777666679**************************** PP

  Methyltransf_12  94 kpgGrl 99 
                      kpgG +
       KHJ35445.1 223 KPGGTF 228
                      ****75 PP

>> MTS  Methyltransferase small domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   5.7e-07   0.00046      29     101 ..     125     199 ..     116     230 .. 0.83

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 5.7e-07
                 CCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTT.STTS-EEEE CS
         MTS  29 kelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvlee.veekkfdli 101
                  ++++kvlD+GcG+G  + ++ak++   ++t ++++ + +e a++ +++++l+  +++v+ d ++  +++++fd +
  KHJ35445.1 125 INEADKVLDVGCGVGGPAREIAKFTGA-HITGLNNNDYQIERATRYAQKEGLSnqLSFVKGDFMQMsFPDNSFDSV 199
                 457889*****************9887.8**********************9999999999998751568888877 PP

>> PrmA  Ribosomal protein L11 methyltransferase (PrmA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.8   0.1       8.1   6.6e+03      52      64 ..      41      53 ..      12      82 .. 0.50
   2 !   19.4   0.0   6.8e-07   0.00056     160     257 ..     126     229 ..     116     249 .. 0.87

  Alignments for each domain:
  == domain 1  score: -3.8 bits;  conditional E-value: 8.1
        PrmA 52 lkeevkvkalfke 64
                  ++++v+ +fk+
  KHJ35445.1 41 DAQKAAVDEYFKH 53
                2333444444432 PP

  == domain 2  score: 19.4 bits;  conditional E-value: 6.8e-07
        PrmA 160 kegeevlDvGtGSGiLaiaaakLgakkvvavDiDevAvkvakeNaelNkveaklevalseellk....eekadviv...aNILaevlielaedikklvk 251
                 +e ++vlDvG+G G  a   ak+  ++++++  ++  ++ a + a++ +++++l+  ++++ ++    ++++d +    a + a+ l + + +i +++k
  KHJ35445.1 126 NEADKVLDVGCGVGGPAREIAKFTGAHITGLNNNDYQIERATRYAQKEGLSNQLSF-VKGDFMQmsfpDNSFDSVYaieATVHASSLEQVYREIFRVLK 223
                 67789***********************************************9975.77887766666677886652227999**************** PP

        PrmA 252 egglli 257
                 +gg++ 
  KHJ35445.1 224 PGGTFG 229
                 ***996 PP

>> Methyltransf_29  Putative S-adenosyl-L-methionine-dependent methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   7.5e-07   0.00062     116     229 ..     126     242 ..      94     255 .. 0.74

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 7.5e-07
  Methyltransf_29 116 gkvrtvlDvGCgvasfgayllsr.dvltlslapkDeh.eaqvqfaLeRgvpailavlgt..krlpyPsrsfdlihCsrCridwteedgilllev 205
                      ++  +vlDvGCgv   +  + +  +     l  +D   e    +a   g+   l+ +    +++++P +sfd +      ++ ++ + ++  e+
       KHJ35445.1 126 NEADKVLDVGCGVGGPAREIAKFtGAHITGLNNNDYQiERATRYAQKEGLSNQLSFVKGdfMQMSFPDNSFDSVYAIEATVHASSLEQVY-REI 218
                      56678********988877766413444567788854277789************99652379*******************99999877.8** PP

  Methyltransf_29 206 dRvlRpgGyfvlsappvyerkeee 229
                       Rvl+pgG f +    ++++ +++
       KHJ35445.1 219 FRVLKPGGTFGVYEWLMTDKYDND 242
                      ********8854444444333333 PP

>> Methyltransf_15  RNA cap guanine-N2 methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.7   0.0   1.2e-06   0.00099       3      70 ..     130     214 ..     128     249 .. 0.79

  Alignments for each domain:
  == domain 1  score: 18.7 bits;  conditional E-value: 1.2e-06
  Methyltransf_15   3 vilDlfsGaGGnviqfalv.fekviaieinleklacaqhNaevYgvsdkitlvlgdvfe................llaklkleki 70 
                       +lD+ +G GG + ++a+  + ++ +++ n  +++ a++ a+  g s+++ +v+gd+++                +++   le++
       KHJ35445.1 130 KVLDVGCGVGGPAREIAKFtGAHITGLNNNDYQIERATRYAQKEGLSNQLSFVKGDFMQmsfpdnsfdsvyaieaTVHASSLEQV 214
                      79***************976899***********************************977777777777766654444444444 PP

>> PCMT  Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.5   0.0   3.3e-06    0.0027      68     168 ..     118     227 ..     107     230 .. 0.78

  Alignments for each domain:
  == domain 1  score: 17.5 bits;  conditional E-value: 3.3e-06
                 HTT....--TT-EEEEES-TTSHHHHHHHHHHCTTCEEEEEESBHHHHHHHHHHHHHCTTC.SEEEEES-GGGTTGGG-SEEEEE...ESSBB...SS- CS
        PCMT  68 lle....lkkgarvLevGsGsGyltavlarlvgekgrvvsierikelveeakrnlkkldle.nvivvvgDGrkGyeekaPYdaih...vgaaa...pei 155
                 +l     +++ ++vL+vG+G G  +  +a++ g++    +++     +e+a+r  +k++l+ ++++v gD  +   +   +d ++    ++ a   +++
  KHJ35445.1 118 YLAakigINEADKVLDVGCGVGGPAREIAKFTGAHI--TGLNNNDYQIERATRYAQKEGLSnQLSFVKGDFMQMSFPDNSFDSVYaieATVHAsslEQV 214
                 444444599**********************99877..9********************9978*******98766666668876622223322223678 PP

                 -HHHHHTEEEEEE CS
        PCMT 156 PealidQLkeGGr 168
                  +++++ Lk+GG 
  KHJ35445.1 215 YREIFRVLKPGGT 227
                 8889999999986 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.3       4.6   3.7e+03      83     104 ..      26      56 ..       5      77 .. 0.44
   2 !   17.4   0.0     4e-06    0.0033      24     100 ..     126     197 ..     107     249 .. 0.84

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 4.6
  Methyltransf_32  83 sfaelsieeatssktltkkve.........a 104
                      s ae+  +   ++++  +k           +
       KHJ35445.1  26 SNAEGGFRAMLKKDKDAQKAAvdeyfkhwdN 56 
                      4444443333333322222223344333321 PP

  == domain 2  score: 17.4 bits;  conditional E-value: 4e-06
  Methyltransf_32  24 sgaltvvDvGaGkgYLsfvlalkekeyklkvvgidakeelvekaekraeklgkkfnkrlsfaelsieeatssktltk 100
                      ++a +v+DvG+G g  ++ +a      + +++g++ ++  +e+a + a+k g  ++++lsf +++  + + ++ + +
       KHJ35445.1 126 NEADKVLDVGCGVGGPAREIAK---FTGAHITGLNNNDYQIERATRYAQKEG--LSNQLSFVKGDFMQMSFPDNSFD 197
                      67899***************99...88*************************..99*******99888776665554 PP

>> MetW  Methionine biosynthesis protein MetW
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   3.9e-06    0.0032      11     101 ..     125     221 ..     114     225 .. 0.79

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 3.9e-06
        MetW  11 ikpgsrvldlGcGdGellellkeekqvdgrGleldeegvaecv....akGlsviqgdldkdl..enfedksfdyvvlsqtlqatrnpkevldellri 101
                 i++  +vld+GcG G   + +++  + +  Gl++++  + +++    + Gls     +  d+    f+d+sfd v    +       ++v +e++r+
  KHJ35445.1 125 INEADKVLDVGCGVGGPAREIAKFTGAHITGLNNNDYQIERATryaqKEGLSNQLSFVKGDFmqMSFPDNSFDSVYAIEATVHASSLEQVYREIFRV 221
                 78899*******************************999987633324688776666666652157*******998777777777889999999998 PP

>> Methyltransf_2  O-methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.6   0.0   4.5e-06    0.0037      60     175 ..     125     241 ..      84     259 .. 0.78

  Alignments for each domain:
  == domain 1  score: 16.6 bits;  conditional E-value: 4.5e-06
                     GGG-SEEEEET-TTSHHHHHHHHH-TT-EEEEEE-H.HHHHHHHHHS.-----TTEEEEES-TTTS-----SEEEEESSGGGS-HHHHHHHHHHH CS
  Methyltransf_2  60 leglkslvDvGGGtGalakaivsayPtikvivfDlp.eVveaAkehl.sageeervefvgGdffkdslPeaDaillkrvlhDwsdekcvklLkrv 152
                     +++  +++DvG G+G  a++i++ + + +++ +      +e+A ++  + g++++++fv+Gdf++ s P+    ++  +       +  ++ +++
      KHJ35445.1 125 INEADKVLDVGCGVGGPAREIAK-FTGAHITGLNNNdYQIERATRYAqKEGLSNQLSFVKGDFMQMSFPDNSFDSVYAIEATVHASSLEQVYREI 218
                     6677899*************986.6666666554441468888888767899*****************77665555555555566677778888 PP

                     HHH--TT-EEEEEE----TTS-- CS
  Methyltransf_2 153 kkalpagGkvivveavlgadpsg 175
                      + l++gG   v e ++  + ++
      KHJ35445.1 219 FRVLKPGGTFGVYEWLMTDKYDN 241
                     99999999888888776555444 PP

>> TehB  Tellurite resistance protein TehB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.0   2.7e-05     0.022      13      92 ..     109     191 ..     100     241 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 2.7e-05
                 HT-----HHHHHH.CCCS-S-EEEEES-TTSHHHHHH.HHTT-EEEEEES-HHHHHHHHHHHHHTT-TT.EEEEE--GGG--- CS
        TehB  13 ynltathsevvea.vkivkpgkvldlgcgqgrnslyl.sllgydvtawdknensiafleeikekenlkn.istalydineakl 92 
                 y+  a h + + a + i +  kvld+gcg g  +  + +  g ++t +++n+  i+   + ++ke l+n +s    d  ++++
  KHJ35445.1 109 YQAIARHEHYLAAkIGINEADKVLDVGCGVGGPAREIaKFTGAHITGLNNNDYQIERATRYAQKEGLSNqLSFVKGDFMQMSF 191
                 555666666655524566778********998776651578*************************98624444445555555 PP

>> RrnaAD  Ribosomal RNA adenine dimethylase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   2.5e-05     0.021      24      96 ..     121     197 ..     108     231 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 2.5e-05
                 HHH-GGTTSEEEEES-TTTCCHHHHHCC-.SEEEEE-S-HHHHHHHHCHTT...TCCCEEEE-S-CCGHHHHHHHCT CS
      RrnaAD  24 dklnleekltvleigpGkGilTeeLakra.kqvvvlElderLakllqkkls...kdeklkvvhqDflkfetpeevte 96 
                  k+ ++e ++vl++g G+G   +e+ak    + + l +    +++ +   +   ++++l  v+ Df+++++p +  +
  KHJ35445.1 121 AKIGINEADKVLDVGCGVGGPAREIAKFTgAHITGLNNNDYQIERATRYAQkegLSNQLSFVKGDFMQMSFPDNSFD 197
                 678899***********************9999999876666665555444477999***************97655 PP

>> Methyltransf_24  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0         3   2.5e+03      54      97 ..      21      60 ..       8      63 .. 0.72
   2 ?   13.3   0.0   0.00016      0.13      25     101 ..     152     228 ..     117     230 .. 0.85

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 3
  Methyltransf_24 54 ikadseealaslaagsiDllfiDgghaaeavledleallprlap 97
                     +++ds++a ++++     +l  D +++++av e+++++ ++ a+
       KHJ35445.1 21 MHKDSSNAEGGFR----AMLKKDKDAQKAAVDEYFKHWDNKTAK 60
                     5555555555555....577778899999999999999887765 PP

  == domain 2  score: 13.3 bits;  conditional E-value: 0.00016
  Methyltransf_24  25 rlvavdhdpg.aeeaaalareaglddrvrlikadseealaslaagsiD.llfiDgghaaeavledleallprlapggvv 101
                      +++ + ++    e+a+++a+++gl++++ ++k+d+ +   s+ + s+D ++ i +   a++  + ++ + ++l+pgg++
       KHJ35445.1 152 HITGLNNNDYqIERATRYAQKEGLSNQLSFVKGDFMQM--SFPDNSFDsVYAIEATVHASSLEQVYREIFRVLKPGGTF 228
                      55555554444678999********************9..899999*956669***999******************86 PP

>> NodS  Nodulation protein S (NodS)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   5.6e-05     0.046      30     141 ..     114     227 ..     105     231 .. 0.79

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 5.6e-05
        NodS  30 rlaqilrlslaqgsiadalevGcaaGalterlapyc.krltvvdvveeaiararervke...sshiswivsdvqqfs.tdekfdlivvaevlyyiedva 123
                 r++  l   ++ +++ ++l+vGc  G  + ++a ++  ++t ++  +  i+ra +  ++   s+++s+++ d  q+s  d+ fd +   e   + + ++
  KHJ35445.1 114 RHEHYLAAKIGINEADKVLDVGCGVGGPAREIAKFTgAHITGLNNNDYQIERATRYAQKeglSNQLSFVKGDFMQMSfPDNSFDSVYAIEATVHASSLE 212
                 77777777788888999*************9999863689*****999***99876665333679***********955899***99999876665555 PP

        NodS 124 elraavrnlvsllapdgq 141
                 +     r++ ++l+p+g+
  KHJ35445.1 213 Q---VYREIFRVLKPGGT 227
                 4...45777777777776 PP

>> Methyltransf_4  Putative methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00023      0.18       4      77 ..     130     200 ..     127     202 .. 0.87

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00023
                     EEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTSS.EEEEES-CCCHHHHCS-TTSEEEEE CS
  Methyltransf_4   4 vvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelkN.lrilrgdalkvllelledgslekif 77 
                      vl++GcG G+   ++Ak +    + G++ +   ++++ + +++++l+N l  ++gd   +++ +++d+s++ ++
      KHJ35445.1 130 KVLDVGCGVGGPAREIAK-FTGAHITGLNNNDYQIERATRYAQKEGLSNqLSFVKGD---FMQMSFPDNSFDSVY 200
                     589**************8.5667899***********************44555555...8999******99987 PP

>> DRE2_N  Fe-S cluster assembly protein DRE2 N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00043      0.35      44      92 ..     189     233 ..     187     249 .. 0.79

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00043
                 ----SSS--SEEEE---..SS-S----HHHHHHHHTT--TT--EE---H CS
      DRE2_N  44 vsLpastYdlvllltdeeeeeeelliprkliqkivkaLkpgGklkgqdg 92 
                 +s+p++++d v+ +  +  ++   ++ ++++  i++ LkpgG++ + + 
  KHJ35445.1 189 MSFPDNSFDSVYAIEAT-VHA---SSLEQVYREIFRVLKPGGTFGVYEW 233
                 5899**********988.443...33367**************977665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       765  (0.0426683); expected 358.6 (0.02)
Passed bias filter:                      546  (0.0304535); expected 358.6 (0.02)
Passed Vit filter:                        62  (0.00345808); expected 17.9 (0.001)
Passed Fwd filter:                        22  (0.00122706); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              22  [number of targets reported over threshold]
# CPU time: 0.54u 0.26s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 2685.74
//
Query:       KHJ35446.1  [L=1074]
Description: putative glycine dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
   1.3e-174  581.0   0.0   2.7e-162  540.5   0.0    2.1  2  GDC-P            Glycine cleavage system P-protein
    2.9e-07   29.8   0.0    0.00056   19.0   0.0    2.4  2  Aminotran_5      Aminotransferase class-V
    5.3e-05   22.6   0.0    0.00011   21.6   0.0    1.4  1  Beta_elim_lyase  Beta-eliminating lyase
  ------ inclusion threshold ------
      0.022   13.3   0.0        0.7    8.4   0.0    2.2  2  Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme


Domain annotation for each model (and alignments):
>> GDC-P  Glycine cleavage system P-protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  540.5   0.0  5.9e-166  2.7e-162       1     430 []      81     535 ..      81     535 .. 0.91
   2 !   38.4   0.0   1.4e-13   6.4e-10      43     286 ..     580     838 ..     538     844 .. 0.74

  Alignments for each domain:
  == domain 1  score: 540.5 bits;  conditional E-value: 5.9e-166
                 HHH-SS-HHHHHHHHHHHT..-SSHHHHHHHHS-GGGB--S-------.......--HHHHHHHHHHHHT.TB--.-EE--BTTB------HHHHHHTT CS
       GDC-P   1 erhigpsekdqkemLetlG..lkslddliekavPkeiklkkelkleap.......ksEeellaelekias.knkv.vksfiGaGyydtilPaviqrnil 88 
                 +rhigpse+  + mL++l   +++ldd+i++ +P++i l ++lk+++        ++E+e+l  l+k  + +    ++s+iG Gy +ti+P vi+rn+l
  KHJ35446.1  81 RRHIGPSEESANMMLKKLDppAENLDDFINQVLPANILLDTKLKIDTKlsankeaFTETEVLDLLQKKMEsEVSStARSYIGCGYANTIVPGVIKRNVL 179
                 69****************64489****************999999888888888899******99875441333359********************** PP

                 T-HHHHS--S-SSGGG-HHHHHHHHHHHHHHHHHHT-SEE-S-BS-HHHHHHHHHHHHHH.....H-SSS--EEEEETTS-HHHHHHHHHHHGGGT-EE CS
       GDC-P  89 enpewytaYtPYqaEisqGrLeallnfqtlvadltGldianasllDegtAaaEAvllaar.....askkkakkvvvdkkvhpqtlevlktrakglgiei 182
                 enp+wyt+YtPYq+EisqGrLe+llnfqtlv+dlt l+ianasllDe tAaaEA++l+ +      +k  +++++++  vhpqt++v++ ra+g+gi+i
  KHJ35446.1 180 ENPGWYTSYTPYQPEISQGRLESLLNFQTLVSDLTALPIANASLLDEPTAAAEALTLSLNslpasRQKDPNRTFLISDYVHPQTKSVIQSRADGFGIKI 278
                 ********************************************************98652221135555899************************** PP

                 EEE-GGG--S-......S-EEEEEEEES-TTSB----HHHHHHHHHTT-EEEEEE-TTGGGTB--HHHHT-SEEEEE-TTTT---GGG----EEEEE-G CS
       GDC-P 183 vevdlteekvtd...kekevagvlvqypnteGriedlkelvekakkkkslvvvaadllaLtllkpPgelgaDivvGsaqrfGvPlgyGGPhagffAvke 278
                 +  d+ +++++      k++ gvlvqyp+teG++ed+k l++ ++++ ++++va+dllaLtll+pPge+gaDi++GsaqrfGvPlg+GGPha+ffAv e
  KHJ35446.1 279 EFGDVLANNFHRvkeLGKSLVGVLVQYPDTEGAVEDFKGLSDIIHQHGAVFSVATDLLALTLLTPPGEFGADIAFGSAQRFGVPLGFGGPHAAFFAVDE 377
                 *****99998875445689******************************************************************************** PP

                 GGGGG--S-EEEEEEBTTS-EEEEEE-CCGSHHCCHHHCS-S--S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT..T-E...E..- CS
       GDC-P 279 klkRkiPGRlvGvskDaegkralrlalqtREqHirRdkAtsniCtaqaLlAnlaalyavyhGkeglkeiarrihkkteilakelkkk.leee...l..k 371
                 k+kRkiPGRl+G+skD+ g+ralrl+lqtREqHirR+kAtsn+CtaqaLlAn++alya+yhG++gl+eia+++ + + +l+++l+   le+    +  +
  KHJ35446.1 378 KYKRKIPGRLIGISKDRLGNRALRLSLQTREQHIRREKATSNLCTAQALLANMTALYAMYHGPNGLREIAQKVNTGARVLEEGLRTLgLETGsrgIgeD 476
                 ************************************************************************************986433321122336 PP

                 -SSBSSEEEEE--TTTHHHHHHHHHHTT.EE-EEESTTEEEEE--TT--HHHHHHHHHHH CS
       GDC-P 372 kkkffdtllieveekaaekvlkkaekeg.lnlrkvelktvgialdEtvtkedieallkvl 430
                 +k +fdt++++v  ka+ +vl+ a +++ +nlr  +++ vg+++dEt+  +d+e++l+v+
  KHJ35446.1 477 NKVLFDTVVVKVPGKAQ-RVLEIASSTHnINLRLFDEDRVGVTIDETTSAADLEDILSVF 535
                 899**********9998.77776665545****************************997 PP

  == domain 2  score: 38.4 bits;  conditional E-value: 1.4e-13
                 ------HHHHHHHHHHHHTTB--.-EE--BTTB------HHHHHHTTT-HHHHS--S-SSGGG-H..HHHHHHHHHHHHHHHHHT-SEE-S-BS-HHHH CS
       GDC-P  43 leapksEeellaelekiasknkv.vksfiGaGyydtilPaviqrnilenpewytaYtPYqaEisq..GrLeallnfqtlvadltGldianasllDegtA 138
                 +++ +sE+ell+ + ++ sk+   v+s+i  G   ++l ++ +   ++ p++ ++  P+ + isq  G L  + + ++ ++++tG+d    s+  ++ A
  KHJ35446.1 580 FNTYHSETELLRYIYHLQSKDLSlVHSMIPLGSCTMKLNSTTEMTPVSWPQF-SNIHPFVP-ISQtkGYLSMIEDLKADLVEITGFDA--VSIQPNSGA 674
                 334499***************9889******************999999998.56678887.6664489*9999************96..689999999 PP

                 HHHHHHH..HHHH-SSS....--EEEE...ETTS-HHHHHHHHHHHGGGT-EEEEE-GGG--S-.......S-EEEEEEEES-TTSB---.-HHHHHHH CS
       GDC-P 139 aaEAvll..aaraskkk....akkvvv...dkkvhpqtlevlktrakglgieivevdlteekvtd....kekevagvlvqypnteGried.lkelveka 223
                  +E + l  +++ +k+k    ++  ++   ++  +p ++++   r  +++ ++ + +l   + ++     ++ +a+++v yp+t+G  e+ ++++ + +
  KHJ35446.1 675 QGEFAGLlvISEYHKQKsdskRDICLIpvsAHGTNPASASMAGMRVVTIKCDTKTGNLDMADLKQkcekYKETLAAIMVTYPSTFGVFEPeIRSVCNLV 773
                 999544311334444442211333444111233445555555555555555555544433333324554678899*************9879******* PP

                 HHTT-EEEEE.E-TTGGGTB--HHHHT-SEE.EEE-TTTT---GGG----EEEEE-GGGGGG--S CS
       GDC-P 224 kkkkslvvva.adllaLtllkpPgelgaDiv.vGsaqrfGvPlgyGGPhagffAvkeklkRkiPG 286
                 +++   v +  a++ a   l +Pg++gaD+  +   + f +P g GGP +g + vk++l+  +PG
  KHJ35446.1 774 HEYGGQVYMDgANMNAQIGLCSPGHIGADVChLNLHKTFCIPHGGGGPGVGPICVKSHLAPFLPG 838
                 ***9999987155556666***********84667889*********************999999 PP

>> Aminotran_5  Aminotransferase class-V
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    8.2   0.0   0.00023         1      70     209 ..     230     366 ..     228     367 .. 0.86
   2 !   19.0   0.0   1.2e-07   0.00056      76     221 ..     682     836 ..     671     853 .. 0.74

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.00023
                  HHHHHHHHHHHCCCC..-TTTSEEEEETTSHGGGTHHHHHHHHHHTEEEEEEEBETTSCBEGGGHHHH--TTEEEEEEESBETTTTEB--HHHHHHHH CS
  Aminotran_5  70 tteainlvalslars..lkpgdeivvteaehhanlvpwqelakrtgakvkvipldeegeldldelekllnektklvaithvsnvtGtiqpveeigkla 165
                  ++ea++l ++sl +s   +p +++++++  h  +   +q  a+  g+k+++  + ++   +++el k l     +  + +   + G +++++ + +++
   KHJ35446.1 230 AAEALTLSLNSLPASrqKDPNRTFLISDYVHPQTKSVIQSRADGFGIKIEFGDVLANNFHRVKELGKSL-----VGVLVQYPDTEGAVEDFKGLSDII 322
                  6789999999998888789999*********9999999*9999***********999999999998887.....33444556667************* PP

                  HHTT-EEEEE-TTTTTTS---HHHHTESEEEEETTTTTSSTT-E CS
  Aminotran_5 166 kkkgalvlvDaaqavghipidvkklgvDflafsghKllgPtGiG 209
                  +++ga++ v     ++       ++g+D+++ s++ +  P G G
   KHJ35446.1 323 HQHGAVFSVATDLLALTLLTPPGEFGADIAFGSAQRFGVPLGFG 366
                  *******9977777788888889999999999999988887765 PP

  == domain 2  score: 19.0 bits;  conditional E-value: 1.2e-07
                  HHHHHCCCC.-TTTSEEEEETTSHGGGTHHHHHHHHHHTEEEEEEEBE.TTSCBEGGGHHHH--..TTEEEEEEESBETTTTE.B--HHHHHHHHHHT CS
  Aminotran_5  76 lvalslars.lkpgdeivvteaehhanlvpwqelakrtgakvkvipld.eegeldldeleklln..ektklvaithvsnvtGt.iqpveeigklakkk 168
                  lv+  + ++  + ++ i +  +  h++  p+ + +   g++v+ i+ d ++g+ld+ +l+++ +  ++t + ++    ++ G+   ++ ++++l++++
   KHJ35446.1 682 LVISEYHKQkSDSKRDICLIPVSAHGTN-PASASM--AGMRVVTIKCDtKTGNLDMADLKQKCEkyKETLAAIMVTYPSTFGVfEPEIRSVCNLVHEY 776
                  5666666666777888888888888877.554443..699*****997367***********9743444444445566889**55669********** PP

                  T-EEEEE-TTTTTTS-.--HHHHTESEEEEETTT.TTSS.....TT-EEEEEEHHHHHTS CS
  Aminotran_5 169 galvlvDaaqavghip.idvkklgvDflafsghK.llgP.....tGiGvlyvrkellekl 221
                  g  v +D+a +  +i       +g+D+  +  hK ++ P     +G+G ++v+++l   l
   KHJ35446.1 777 GGQVYMDGANMNAQIGlCSPGHIGADVCHLNLHKtFCIPhggggPGVGPICVKSHLAPFL 836
                  *********9877765157889************99988222224678888887555444 PP

>> Beta_elim_lyase  Beta-eliminating lyase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.6   0.0   2.5e-08   0.00011      36     171 ..     652     787 ..     645     827 .. 0.68

  Alignments for each domain:
  == domain 1  score: 21.6 bits;  conditional E-value: 2.5e-08
                      HHHHHHHHHTT-SEEEE....ES-HHHHHHHHH.HHH--TTEEE..EEETT..-HHHHSSTTHHHHCC--EEEEE-EBTT.TBE-HHHHHHHS- CS
  Beta_elim_lyase  36 rLedavaelfgkeaalf....vpqGtaAnsill.killqrgeev..ivtep..ahihfdetgaiaelagvklrdlknkea.Gkmdlekleaaik 119
                      +L++ + e++g++a+       +qG  A  + + +++ q+ +++  i+ +p  ah+    + a a +ag++++++k + + G++d+++l+++ +
       KHJ35446.1 652 DLKADLVEITGFDAVSIqpnsGAQGEFAGLLVIsEYHKQKSDSKrdICLIPvsAHGT---NPASASMAGMRVVTIKCDTKtGNLDMADLKQKCE 742
                      567777778888877762222334555555555344445555443355555555554...445566666666666655444************* PP

                      -S-TTS-EEEEEEEESSBTTTTTB---HHHHHHHHHHHHHCT-EEEEEETTH CS
  Beta_elim_lyase 120 evgaheekiklisltvTnntagGqvvsleelrevaaiakkygiplhlDgARf 171
                      +   ++e  ++i++t       G  v   e+r v +++++yg ++ +DgA +
       KHJ35446.1 743 K---YKETLAAIMVTYPSTF--G--VFEPEIRSVCNLVHEYGGQVYMDGANM 787
                      *...999********99997..4..56779*******************954 PP

>> Cys_Met_Meta_PP  Cys/Met metabolism PLP-dependent enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.4   0.0   0.00016       0.7      94     199 ..     253     359 ..     207     360 .. 0.77
   2 ?    2.5   0.0    0.0094        42     111     192 ..     721     804 ..     712     810 .. 0.85

  Alignments for each domain:
  == domain 1  score: 8.4 bits;  conditional E-value: 0.00016
                      EEEESTSSHHHHHHHHHTHHHTTCEEEEEST..TSHHHHHHHCCTTEEEEEEESS-TTTT----HHHHHHHHHHTT.-EEEEEGTTTHTTTS-G CS
  Cys_Met_Meta_PP  94 ivvsddlYggtqrllkkvlkklgievkfvdt..sdleelekaikentklvylEtptnpllkvvDiekiaklakkag.vlvvvDntfaspllqrp 184
                       ++sd+++  t++++++ +  +gi+++f d+  ++++++++  k+    v++  p +    v D++ ++++++++g v  v    +a  ll+ p
       KHJ35446.1 253 FLISDYVHPQTKSVIQSRADGFGIKIEFGDVlaNNFHRVKELGKS-LVGVLVQYP-DTEGAVEDFKGLSDIIHQHGaVFSVATDLLALTLLTPP 344
                      688999999*******************99833344444444444.444556555.456789**************55555556666679999* PP

                      GGGT-SEEEEETTTT CS
  Cys_Met_Meta_PP 185 lklgaDivvhSaTKy 199
                       ++gaDi   Sa ++
       KHJ35446.1 345 GEFGADIAFGSAQRF 359
                      ********9999765 PP

  == domain 2  score: 2.5 bits;  conditional E-value: 0.0094
                      THHHTTCEEEEESTTSHHHHHHHCCTTEEEEEEESS-TTTT----HHHHHHHHHHTT-EEEEEGTTTHT..TTS-GGGGT-SEE CS
  Cys_Met_Meta_PP 111 vlkklgievkfvdtsdleelekaikentklvylEtptnpllkvvDiekiaklakkagvlvvvDntfasp..llqrplklgaDiv 192
                      v+ k   ++   d++dl++  ++ ke   ++ +  p+   +  + i+++++l+++ g  v +D + +     l+ p + gaD+ 
       KHJ35446.1 721 VTIKCDTKTGNLDMADLKQKCEKYKETLAAIMVTYPSTFGVFEPEIRSVCNLVHEYGGQVYMDGANMNAqiGLCSPGHIGADVC 804
                      55566777788899999999999999999**********************************987766456999999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1074 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       622  (0.0346924); expected 358.6 (0.02)
Passed bias filter:                      528  (0.0294495); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.76u 0.29s 00:00:01.05 Elapsed: 00:00:00.43
# Mc/sec: 7508.64
//
Query:       KHJ35447.1  [L=372]
Description: putative pre-mrna-splicing factor slt11 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.9e-07   30.2   0.0    4.9e-07   29.5   0.0    1.4  1  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
     0.0059   16.6   0.0     0.0099   15.9   0.0    1.3  1  Nup35_RRM_2   Nup53/35/40-type RNA recognition motif
  ------ inclusion threshold ------
      0.029   14.2   0.0      0.052   13.4   0.0    1.3  1  RRM_occluded  Occluded RNA-recognition motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.5   0.0   8.3e-11   4.9e-07       1      62 [.     231     287 ..     231     296 .. 0.92

  Alignments for each domain:
  == domain 1  score: 29.5 bits;  conditional E-value: 8.3e-11
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngk 62 
                 lf++++  d+ e++++++F + G+i+s+  ++        +af++F+++ dAe A ++++g+
  KHJ35447.1 231 LFITGIEDDLPEHMIRAFFAPLGSIRSLVCSH-----LSHCAFINFQTRKDAEVAAKHCQGR 287
                 89***********************8888888.....5**********************95 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.9   0.0   1.7e-06    0.0099       5      52 ..     232     280 ..     229     281 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.9 bits;  conditional E-value: 1.7e-06
  Nup35_RRM_2   5 aVsGydtelielVle.hFasfGeIvkhyvpkevsvmyvkfesekdaekA 52 
                   ++G++ +l e +++ +Fa  G I    ++  ++ +++ f ++kdae A
   KHJ35447.1 232 FITGIEDDLPEHMIRaFFAPLGSIRSLVCSHLSHCAFINFQTRKDAEVA 280
                  6899999999888888*******************************98 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.4   0.0   8.7e-06     0.052       4      51 ..     231     277 ..     228     291 .. 0.91

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 8.7e-06
  RRM_occluded   4 isllplsDtvnkariralveekegeikkivLvpdheGAivefkdekia 51 
                   + + ++ D   +  ira++ +  g+i+ +v+    ++A++ f+ +k+a
    KHJ35447.1 231 LFITGIEDDLPEHMIRAFFAPL-GSIRSLVCSHLSHCAFINFQTRKDA 277
                   567899****************.*******************999887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (372 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       630  (0.0351386); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.41
# Mc/sec: 2694.69
//
Query:       KHJ35448.1  [L=556]
Description: hypothetical protein EV44_g3105 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
  ------ inclusion threshold ------
      0.056   13.2   0.0      0.097   12.4   0.0    1.3  1  HERV-K_env_2  Retro-transcribing viruses envelope glycoprotei


Domain annotation for each model (and alignments):
>> HERV-K_env_2  Retro-transcribing viruses envelope glycoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   5.4e-06     0.097      57     140 ..     220     304 ..     185     315 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 5.4e-06
  HERV-K_env_2  57 clmpavqnwlvevptvsp.isrftyhmvsgmslrprvnylqdfsyqrslkfrpkgkpcpkeipkeskntevlvweecvansavil 140
                        +q  + + p+      +   + +s  s+   ++  +d   + s+k++pk k + ++  k+  ++e+lv ee    s+v +
    KHJ35448.1 220 PSKERIQTEITNTPIAQDdHKKHDANDLSDSSVESMIQKKDDEHNEESIKIKPKRKRANRKKKKKKTKSELLVVEESNKTSSVAI 304
                   555556666666666554134556677888899999999999999****************9999999********998888765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (556 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1793  (0.100006); expected 358.6 (0.02)
Passed bias filter:                      388  (0.0216409); expected 358.6 (0.02)
Passed Vit filter:                        47  (0.00262145); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.61u 0.28s 00:00:00.89 Elapsed: 00:00:00.42
# Mc/sec: 3944.11
//
Query:       KHJ35449.1  [L=902]
Description: putative atp-dependent protease la [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.7e-68  228.8   0.6      1e-67  227.7   0.6    1.5  1  Lon_C           Lon protease (S16) C-terminal proteolytic dom
    1.7e-24   86.9   0.1    1.7e-24   86.9   0.1    1.7  2  LON_substr_bdg  ATP-dependent protease La (LON) substrate-bin
    5.3e-24   85.1   0.0      3e-23   82.7   0.0    2.2  2  AAA             ATPase family associated with various cellula
    4.3e-09   36.5   0.0    1.4e-08   34.9   0.0    1.9  1  AAA_5           AAA domain (dynein-related subfamily)
    1.8e-07   31.0   0.1    4.3e-07   29.8   0.1    1.7  1  ChlI            Subunit ChlI of Mg-chelatase
    4.5e-06   27.1   0.0    1.4e-05   25.5   0.0    1.8  1  AAA_16          AAA ATPase domain
    5.9e-06   26.1   0.0    1.5e-05   24.8   0.0    1.7  1  IstB_IS21       IstB-like ATP binding protein
    6.1e-05   23.2   0.0    0.00026   21.2   0.0    2.0  1  AAA_2           AAA domain (Cdc48 subfamily)
    7.5e-05   22.5   0.0    0.00053   19.8   0.0    2.2  2  RuvB_N          Holliday junction DNA helicase RuvB P-loop do
    8.2e-05   22.5   0.0    0.00021   21.2   0.0    1.7  1  AAA_3           ATPase family associated with various cellula
    0.00031   21.0   0.0     0.0086   16.3   0.0    2.8  1  AAA_22          AAA domain
     0.0027   17.9   0.0      0.008   16.3   0.0    1.9  1  AAA_33          AAA domain
     0.0051   16.8   0.1      0.014   15.3   0.1    1.7  1  Rad17           Rad17 P-loop domain
      0.009   15.3   0.0      0.018   14.2   0.0    1.4  1  TIP49           TIP49 P-loop domain
     0.0094   15.9   1.1      0.096   12.6   0.0    2.7  3  NACHT           NACHT domain
  ------ inclusion threshold ------
      0.012   14.6   0.2       0.72    8.7   0.1    2.3  2  AAA_PrkA        PrkA AAA domain
      0.014   14.8   0.0      0.042   13.2   0.0    1.8  1  TniB            Bacterial TniB protein
      0.016   15.1   0.5       0.05   13.5   0.0    2.1  2  RsgA_GTPase     RsgA GTPase
      0.021   14.2   0.2       0.12   11.7   0.1    2.2  2  Mg_chelatase    Magnesium chelatase, subunit ChlI
      0.025   15.0   0.0      0.057   13.8   0.0    1.6  1  RNA_helicase    RNA helicase
      0.025   15.1   0.1        0.1   13.2   0.0    2.1  1  AAA_18          AAA domain
      0.054   13.5   0.0       0.15   12.1   0.0    1.8  1  AAA_14          AAA domain
      0.063   13.7   0.4       0.19   12.2   0.4    1.8  1  RSS_P20         Suppressor of RNA silencing P21-like N-termin
      0.066   13.2   0.0       0.17   11.9   0.0    1.7  1  TsaE            Threonylcarbamoyl adenosine biosynthesis prot
      0.082   12.4   0.0       0.16   11.4   0.0    1.4  1  AAA_7           P-loop containing dynein motor region
      0.091   12.7   0.0       0.23   11.4   0.0    1.7  1  NTPase_1        NTPase
        0.1   11.8   0.0       0.21   10.8   0.0    1.5  1  NB-ARC          NB-ARC domain
       0.14   11.8   0.0       0.27   11.0   0.0    1.4  1  AAA_24          AAA domain
       0.15   11.7   0.0       0.28   10.7   0.0    1.4  1  AAA_25          AAA domain
       0.17   12.3   0.0       0.17   12.3   0.0    3.4  2  AAA_23          AAA domain


Domain annotation for each model (and alignments):
>> Lon_C  Lon protease (S16) C-terminal proteolytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  227.7   0.6   1.7e-70     1e-67       3     201 ..     678     882 ..     676     885 .. 0.93

  Alignments for each domain:
  == domain 1  score: 227.7 bits;  conditional E-value: 1.7e-70
                 -TTTTHHHH-S-SS--SSSSS--BSSEEEEEEEETTE..EEEEEEEEEEESS-S-EEEEES--HHHHHHHHHHHHHHTSS-GGGSS-S....S-TTT-E CS
       Lon_C   3 takeleellGkkrfrseeaekedqvGvvtGlawtevG..GdlltieavllpgkgklkltGklgdvmkesaqaalsyvrsraeelgidk....evfekkd 95 
                 + k++e++lG +++++e aek+++ G+vtGl+  + G  G++l+ie + +pg+g+++ltGklgdv+kes+++als+v+++a elg+ +    ++++++ 
  KHJ35449.1 678 SVKDIEDILGIEKYDEEIAEKSNRPGIVTGLVAYSSGgnGSILFIEIAEMPGNGSVQLTGKLGDVLKESVEVALSWVKAHAFELGLTQdpseNIMKNRS 776
                 5689**************************97666662457******************************************99865112268899** PP

                 EEEEE-S-B-GGGGGGGHHHHHHHHHHHHTS--B-TTBEE--EE-TT-BEE--S-HHHHHHHHHHTT-SBEEEEGGGGGGTTTS-HHHHTS-B--EESB CS
       Lon_C  96 ihihvPeGavPkdGPsaGvtlatalvslltgkkvrkdvamtGeitLrGrvlpiGGlkekllaakragikkvilPkenekdlediPeevreeleiilvee 194
                 ih+h P+Ga+PkdGPsaG++ + al+sl++g++v + +amtGei+LrGrv ++GG+kekl++a rag+kkv+lP +n kd++d+P+ev+ +leii v++
  KHJ35449.1 777 IHVHCPSGAIPKDGPSAGMAHTIALISLFSGTAVPATLAMTGEISLRGRVTAVGGIKEKLIGALRAGVKKVLLPAQNMKDIRDLPQEVKAGLEIIHVRN 875
                 **************************************************************************************************9 PP

                 HHHHHHH CS
       Lon_C 195 vdevlka 201
                 + e +++
  KHJ35449.1 876 IWEAMHH 882
                 9888766 PP

>> LON_substr_bdg  ATP-dependent protease La (LON) substrate-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.9   0.1   2.8e-27   1.7e-24       1     208 []       8     259 ..       8     259 .. 0.79
   2 ?   -3.1   0.3       9.9   5.9e+03     117     117 ..     371     371 ..     313     443 .. 0.48

  Alignments for each domain:
  == domain 1  score: 86.9 bits;  conditional E-value: 2.8e-27
  LON_substr_bdg   1 elpllpldnkv.lfPgitlpltvs.rpks.....iaaierll..........dk.dkp.yigvflv..k.....................esqkd 53 
                     +lpl+pl +   l+Pg++l++ v  +p+      +    + +          ++ d + +i+++ +                        +   +
      KHJ35449.1   8 NLPLIPLTRDTvLLPGVVLRIPVAsNPSDipsllA----K-IysrtasknhaQRlD-NiHIACVPLrsPlltrygqkmillddrtlahpdK--IE 94 
                     699***977666**********9844544433331....3.247777777764423.3367777666514445556677777888777432..33 PP

  LON_substr_bdg  54 aide.esiselysvGtvarIvqilrlddgrikvvlegleRvkikklekekeegylvaeveiiedd...s.epedsdslqkelkalvqeiiekikk 143
                     +  +  s ++l+ +G+ a+I +++ +++g++ +++eg++Rvki+kl  +   ++++a+v i+e d   s e++  + l+ +lk+l +e+++ i+ 
      KHJ35449.1  95 NFPSyLSSESLFGYGVAAKISGVEGRGTGEFALLVEGIARVKIEKL--TRHSPFFEADV-IYEYDpviSiEDTALEVLFTQLKQLSRELLTIIRI 186
                     33344678999***********************************..779********.8888866559**********************997 PP

  LON_substr_bdg 144 ........slarellkllleielllkyedlenpyrLadlvaailpfsneekqelLeeldvedRlkkvlelLkr 208
                             s+ + +  l+++ +   + + +++ ++Lad++++i+ +s eek+ +L +  v++Rl+k++ ++kr
      KHJ35449.1 187 ssllprstSFSSLSPVLSRRLYHYISRKTVTEAGALADFMTNIVEASIEEKLLVLSAVEVKERLEKAIRIVKR 259
                     6566554426667777888899999*******************************************99885 PP

  == domain 2  score: -3.1 bits;  conditional E-value: 9.9
  LON_substr_bdg 117 d 117
                     +
      KHJ35449.1 371 T 371
                     0 PP

>> AAA  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.1         4   2.4e+03      95     121 ..     213     256 ..     136     268 .. 0.58
   2 !   82.7   0.0     5e-26     3e-23       1     127 [.     452     590 ..     452     595 .. 0.96

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 4
                 HTTTS.................SSTEEEEEEESSGGGSTHHHHS CS
         AAA  95 gvkkk.................eskvivigatnrpdkldpallr 121
                 + +                   e+k++v+ a    ++l++a++ 
  KHJ35449.1 213 RKTVTeagaladfmtniveasiEEKLLVLSAVEVKERLEKAIRI 256
                 33333222222222223333334556666666666666666665 PP

  == domain 2  score: 82.7 bits;  conditional E-value: 5e-26
                 EEEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCSSS.........STTHHHHHHHHHHHHHHHTSTSEEEEEETGGGHHHHHTTCCCHHHHHHHHHHH CS
         AAA   1 vllyGppGtGKTllakavakelgvefleisgsellsk.........yvgesekkirelfkeakekakpsilfiDEidalaksrsgseseeeervvnqLl 90 
                 +ll+GppG+GKT+lak+va+ lg++f +is+  ++++         yv +++  i + +k++   +   ++++DEid++++s+      ++ +  +++l
  KHJ35449.1 452 LLLVGPPGVGKTSLAKSVATALGRKFHRISLGGVRDEaeirghrrtYVAAMPGLIIQGLKKVGVCN--PVFLLDEIDKIGSSN------FQGDPSAAML 542
                 69*********************************889**********************999887..9**********9999......9********* PP

                 HHHHHTTTS............SSTEEEEEEESSGGGSTHHHHSTTSSEE CS
         AAA  91 teldgvkkk............eskvivigatnrpdkldpallrgRfdrk 127
                 ++ld ++++             skv++i+++n+ d+++p+ll +R++++
  KHJ35449.1 543 EVLDPEQNHsftdhyvnipvdLSKVLFIATANSLDTISPPLL-DRMEMI 590
                 *********************999******************.***975 PP

>> AAA_5  AAA domain (dynein-related subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.9   0.0   2.3e-11   1.4e-08       2     138 .]     452     587 ..     451     587 .. 0.77

  Alignments for each domain:
  == domain 1  score: 34.9 bits;  conditional E-value: 2.3e-11
                 EEEE--SSSSHHHHHHHGGGGBS--EEEEE--TT--HHHHH--B--..........--------G-SEEEEESGGG--.HHHHH....HHHHHHHSSEE CS
       AAA_5   2 vlLvGppGtgKselaerlaaalnreveyvqltrdtteedlkgrreik.ngttslvdsplvraaregeilvlDEverae.sevln....sLlslleerrl 94 
                 +lLvGppG+gK++la+++a al+r+++ + l     e++++g+r++       l  + l++ +    +++lDE++++  s+ ++    ++l +l+ ++ 
  KHJ35449.1 452 LLLVGPPGVGKTSLAKSVATALGRKFHRISLGGVRDEAEIRGHRRTYvAAMPGLIIQGLKKVGVCNPVFLLDEIDKIGsSNFQGdpsaAMLEVLDPEQN 550
                 79*******************************************74444444444444444449999*********9455543333378888888877 PP

                 E..-SSSEEE---......-EEEEEESS--.-TT-TTHHHHTT- CS
       AAA_5  95 lleeggelvkaknddllerfrviatanpldrslnelspalrsRf 138
                 +    +++v+ + d  l+++ +iatan+ld     +sp+l++R+
  KHJ35449.1 551 H-SFTDHYVNIPVD--LSKVLFIATANSLD----TISPPLLDRM 587
                 7.333344444332..455***********....99*****997 PP

>> ChlI  Subunit ChlI of Mg-chelatase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.8   0.1   7.2e-10   4.3e-07       6     121 .]     727     853 ..     722     853 .. 0.89

  Alignments for each domain:
  == domain 1  score: 29.8 bits;  conditional E-value: 7.2e-10
        ChlI   6 skglpkftivGlpdtavkeskervrsalkn...........sgfefpakkitvnLaPadlkkeGsafDLpiAigilaaleqieaeeetlflGeLsldGs 93 
                   g+ +++++G +    kes e   s +k            s+  +++++i v   +  ++k+G++  ++  i++++  + +++ +++ + Ge+sl G+
  KHJ35449.1 727 MPGNGSVQLTGKLGDVLKESVEVALSWVKAhafelgltqdpSENIMKNRSIHVHCPSGAIPKDGPSAGMAHTIALISLFSGTAVPATLAMTGEISLRGR 825
                 567777888888888888888888888888777777777777778899999************************************************ PP

        ChlI  94 lrpvkgvlpialaakkegikkvivpken 121
                 +  v g+ + ++ a ++g+kkv++p++n
  KHJ35449.1 826 VTAVGGIKEKLIGALRAGVKKVLLPAQN 853
                 *************************998 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.5   0.0   2.3e-08   1.4e-05      20      52 ..     444     483 ..     431     566 .. 0.68

  Alignments for each domain:
  == domain 1  score: 25.5 bits;  conditional E-value: 2.3e-08
      AAA_16  20 rsgrp.elvllsGesGvGKsslvrellralekd......g 52 
                 r+ +  +++ll+G++GvGK+sl++++++al ++      g
  KHJ35449.1 444 RMVDKsPILLLVGPPGVGKTSLAKSVATALGRKfhrislG 483
                 3333349***********************9996544432 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   2.5e-08   1.5e-05       8      80 ..     408     482 ..     401     554 .. 0.74

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 2.5e-08
   IstB_IS21   8 lrlaklpaqktledidfraarsldkrkvkeL...atlsfiekkenivllGpsGvGKshlaialgveavraglsvlf 80 
                 l+  kl+ q   +did + ++ +++r+ ++L    +   ++k+  ++l+Gp+GvGK+ la +++++  r+ ++++ 
  KHJ35449.1 408 LAVLKLK-QSINQDIDIKIKKASEERAHEKLeilKSQRMVDKSPILLLVGPPGVGKTSLAKSVATALGRKFHRISL 482
                 4444444.445568898888888887766543338999************************99998888877765 PP

>> AAA_2  AAA domain (Cdc48 subfamily)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   4.3e-07   0.00026       6     128 ..     452     574 ..     447     581 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 4.3e-07
                 EEEE--TTSSHHHHHHHHHHHTT-....-EEEEEGGG-------THHHHHHHHHTTT-H..HHHTTS....EEEEETGGG-------------HHHHHH CS
       AAA_2   6 illlgptgvGktelakalaellfvkkekkliradaselleeeevehlvsrligappgyv..gaeegG....ivllDEidKihpkessgadvSregVqrd 98 
                 +ll+gp gvGkt lak++a  l     +k+ r+    +  e e++      + a pg +  g ++ G    + llDEidKi + ++ + d S      +
  KHJ35449.1 452 LLLVGPPGVGKTSLAKSVATALG----RKFHRISLGGVRDEAEIRGHRRTYVAAMPGLIiqGLKKVGvcnpVFLLDEIDKIGS-SNFQGDPS-----AA 540
                 6899******************9....68999988888887778888888888888764126667779999************.56666665.....68 PP

                 HHHHHH...--EE-----.--EE-TT-EEEEEE- CS
       AAA_2  99 LLqile...ggtltdkqg.rkvdtknilfImtga 128
                 +L +l+   +   td++   +vd +++lfI+t +
  KHJ35449.1 541 MLEVLDpeqNHSFTDHYVnIPVDLSKVLFIATAN 574
                 99999944344566888779************98 PP

>> RuvB_N  Holliday junction DNA helicase RuvB P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.8   0.0   8.9e-07   0.00053      28      65 ..     444     481 ..     424     495 .. 0.73
   2 ?   -0.9   0.0         2   1.2e+03     126     156 ..     560     590 ..     555     592 .. 0.87

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 8.9e-07
      RuvB_N  28 kreealdhvllyGpPGlGkttlakiiakelgvklkits 65 
                 +  ++   +ll+GpPG+Gkt+lak +a+ lg k++  s
  KHJ35449.1 444 RMVDKSPILLLVGPPGVGKTSLAKSVATALGRKFHRIS 481
                 33344456899********************9998776 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 2
      RuvB_N 126 ikldlpkftlvgattragllssPlrdrfgiv 156
                 i +dl+k  +++++    ++s Pl dr+ ++
  KHJ35449.1 560 IPVDLSKVLFIATANSLDTISPPLLDRMEMI 590
                 678999999999999999*********9875 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.2   0.0   3.4e-07   0.00021       2     114 ..     452     577 ..     451     584 .. 0.73

  Alignments for each domain:
  == domain 1  score: 21.2 bits;  conditional E-value: 3.4e-07
       AAA_3   2 vllegvPGlaktllvkalakaldlefkriqftpdllPsdilGte.vfeeke...kefefkkGpvfanllladeinrapp.ktq....salleame.erq 90 
                 +ll g PG++kt l+k++a+al+ +f+ri +      ++i G++  + ++        +kk  v + ++l dei++  +   q    +a+le+++ e++
  KHJ35449.1 452 LLLVGPPGVGKTSLAKSVATALGRKFHRISLGGVRDEAEIRGHRrTYVAAMpglIIQGLKKVGVCNPVFLLDEIDKIGSsNFQgdpsAAMLEVLDpEQN 550
                 58999***************************99999*****8624444443333345678899999*******9864413333333899999974666 PP

       AAA_3  91 vtvegethklp...epflvlatqnPie 114
                  +++++  ++p   ++ l +at n ++
  KHJ35449.1 551 HSFTDHYVNIPvdlSKVLFIATANSLD 577
                 677777666662233556788888776 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   1.4e-05    0.0086       5      32 ..     449     476 ..     444     574 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.4e-05
      AAA_22   5 agilvvtGesGtGKTtllrrlleqldee 32 
                   il+++G++G+GKT l++ ++  l + 
  KHJ35449.1 449 SPILLLVGPPGVGKTSLAKSVATALGRK 476
                 5699*****************9998433 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.0   1.3e-05     0.008       2      30 ..     452     482 ..     451     512 .. 0.84

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 1.3e-05
      AAA_33   2 vllvGlpGsGKstlaerllkklg..avllss 30 
                 +llvG+pG+GK+ la++++ +lg  + ++s 
  KHJ35449.1 452 LLLVGPPGVGKTSLAKSVATALGrkFHRISL 482
                 789*******************988877775 PP

>> Rad17  Rad17 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.3   0.1   2.3e-05     0.014      13      75 ..     413     479 ..     401     492 .. 0.81

  Alignments for each domain:
  == domain 1  score: 15.3 bits;  conditional E-value: 2.3e-05
       Rad17  13 ykPekaeelavhkkkieevkewlkadvLesrkkr....iLLisGPsGCgkstvvkvLskelgiklre 75 
                  k    +++ +  kk +e +   k ++L+s++      iLL+ GP+G gk+   k ++  lg k++ 
  KHJ35449.1 413 LKQSINQDIDIKIKKASEERAHEKLEILKSQRMVdkspILLLVGPPGVGKTSLAKSVATALGRKFHR 479
                 55666777888888888877777788888875445678********************999998765 PP

>> TIP49  TIP49 P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.2   0.0     3e-05     0.018      40      83 ..     437     482 ..     415     486 .. 0.84

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 3e-05
                 XXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       TIP49  40 velikekklaGra..vLlaGpsgtGktalaiaiskelgedvpfval 83 
                 +e++k++++  ++  +Ll+Gp+g Gkt+la +++ +lg++ + ++l
  KHJ35449.1 437 LEILKSQRMVDKSpiLLLVGPPGVGKTSLAKSVATALGRKFHRISL 482
                 688999999998554899********************99876665 PP

>> NACHT  NACHT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.4   0.1      0.92   5.5e+02      93     150 ..     169     222 ..     164     234 .. 0.76
   2 !   12.6   0.0   0.00016     0.096       3      26 ..     452     475 ..     450     478 .. 0.90
   3 ?   -2.3   0.0       5.9   3.6e+03      84      99 ..     519     534 ..     500     547 .. 0.77

  Alignments for each domain:
  == domain 1  score: 0.4 bits;  conditional E-value: 0.92
                 -SS-TCH.........HHHHHC.TTTTT--EEEEEEECCCHHHHCTTSSCE..EEEE-- CS
       NACHT  93 lvtdlgqkekqpvrtlLselir.kkllpeasllltvrpralrdleeqleeaivlevegf 150
                 l t+l+q     +r+lL ++ir  +llp+++ + +++p  +r+l +++++++v+e +++
  KHJ35449.1 169 LFTQLKQ----LSRELL-TIIRiSSLLPRSTSFSSLSPVLSRRLYHYISRKTVTEAGAL 222
                 5555555....444555.555536799****************9999999988776655 PP

  == domain 2  score: 12.6 bits;  conditional E-value: 0.00016
                 EEEEC-TTTCHHHHHHHHHHHHCT CS
       NACHT   3 vilqGeaGsGKTtLlqklalawae 26 
                 ++l G++G+GKT L++++a+a+ +
  KHJ35449.1 452 LLLVGPPGVGKTSLAKSVATALGR 475
                 689****************99865 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 5.9
                 EEEEE-STT-SS-TCH CS
       NACHT  84 LlilDglDelvtdlgq 99 
                 +++lD +D++ + + q
  KHJ35449.1 519 VFLLDEIDKIGSSNFQ 534
                 49********998777 PP

>> AAA_PrkA  PrkA AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.4   0.0     0.051        30      54      78 ..     385     409 ..     355     422 .. 0.84
   2 ?    8.7   0.1    0.0012      0.72      81     112 ..     442     473 ..     436     485 .. 0.88

  Alignments for each domain:
  == domain 1  score: 3.4 bits;  conditional E-value: 0.051
    AAA_PrkA  54 kkypafeedffGleetiekiveyfr 78 
                 +  + f++d +Gle++ ++++ey+ 
  KHJ35449.1 385 NARKQFDDDHYGLEKVKKRLLEYLA 409
                 4556899****************86 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.0012
    AAA_PrkA  81 aqrleerkqilyllGPvggGksslverlkkll 112
                 +qr+ ++  il+l+GP g Gk+sl++++ ++l
  KHJ35449.1 442 SQRMVDKSPILLLVGPPGVGKTSLAKSVATAL 473
                 677778899****************9998776 PP

>> TniB  Bacterial TniB protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   7.1e-05     0.042      13      56 ..     427     470 ..     415     479 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 7.1e-05
        TniB  13 yprakeilerLeeLleypkrkrmpnlllvGdsnnGKtmivekFa 56 
                  +  ++++e+Le L +    ++ p lllvG++ +GKt+++++ a
  KHJ35449.1 427 KASEERAHEKLEILKSQRMVDKSPILLLVGPPGVGKTSLAKSVA 470
                 44557899*******************************98765 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.1       8.9   5.3e+03       6      25 ..     254     273 ..     219     281 .. 0.57
   2 ?   13.5   0.0   8.4e-05      0.05      69     131 ..     415     481 ..     400     494 .. 0.72

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 8.9
                  -EETTTTEES--EEEEEEES CS
  RsgA_GTPase   6 nelvrpkvaNvdqllivvsl 25 
                    +v+++++N+ + l ++++
   KHJ35449.1 254 IRIVKRQISNIKNNLSISAV 273
                  23444455555555544444 PP

  == domain 2  score: 13.5 bits;  conditional E-value: 8.4e-05
                  HHHHHHTTSEEEE--TTTH.TTHHHHHH..HCTT.SEEEEECSTTSSHHHHHHHHCTT-----S--- CS
  RsgA_GTPase  69 keelealgyevllvsaktk.egleelke..llkd.ktsvlvGqSGvGKStLinallpelelktgevs 131
                  ++  +++++++ + s+++  e+le lk+  ++++  + +lvG+ GvGK++L ++++  l  k + +s
   KHJ35449.1 415 QSINQDIDIKIKKASEERAhEKLEILKSqrMVDKsPILLLVGPPGVGKTSLAKSVATALGRKFHRIS 481
                  455567777887777664425555555411455557899**************99988777777666 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.1   0.00021      0.12      25      47 ..     452     474 ..     445     485 .. 0.89
   2 ?   -1.2   0.0       1.9   1.1e+03     182     195 ..     576     589 ..     571     599 .. 0.82

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 0.00021
  Mg_chelatase  25 lllvGppGsGKtmlakrlpsllp 47 
                   lllvGppG GKt lak +++ l 
    KHJ35449.1 452 LLLVGPPGVGKTSLAKSVATALG 474
                   89**************9998775 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.9
  Mg_chelatase 182 lsklsgplldRidl 195
                   l+ +s plldR+++
    KHJ35449.1 576 LDTISPPLLDRMEM 589
                   5689*******997 PP

>> RNA_helicase  RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   9.5e-05     0.057       2      27 ..     453     478 ..     452     531 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 9.5e-05
  RNA_helicase   2 wlyGpsgeGKStlakeLakallkklk 27 
                   +l+Gp+g+GK++lak++a+al +k+ 
    KHJ35449.1 453 LLVGPPGVGKTSLAKSVATALGRKFH 478
                   799******************98883 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.2   0.0   0.00017       0.1       2      23 ..     453     474 ..     452     499 .. 0.82

  Alignments for each domain:
  == domain 1  score: 13.2 bits;  conditional E-value: 0.00017
      AAA_18   2 lltGtpGvGKttlakeLskrlg 23 
                 ll G+pGvGKt+lak ++  lg
  KHJ35449.1 453 LLVGPPGVGKTSLAKSVATALG 474
                 689************9988873 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00025      0.15       2      76 ..     449     528 ..     448     579 .. 0.76

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00025
      AAA_14   2 rkilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkla.dpe.....kllelileklke..ekktylflDEiqev 76 
                 ++il+++G+  vGKT l+k ++  l    +++  i+l   rd+++    +      ++ li + lk+    + +++lDEi ++
  KHJ35449.1 449 SPILLLVGPPGVGKTSLAKSVATALG---RKFHRISLGGVRDEAEIrGHRrtyvaAMPGLIIQGLKKvgVCNPVFLLDEIDKI 528
                 5799******************8888...999999998877744221121223444445555554445545678999999887 PP

>> RSS_P20  Suppressor of RNA silencing P21-like N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.4   0.00031      0.19      30      77 ..     396     441 ..     340     445 .. 0.86

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00031
     RSS_P20  30 glekgnlidsieeFvellklsdslKsdindsvkekedskkslKrrilk 77 
                 g  ++++++++ e+   lkl++s+++di  + k+ + +++ +K++ilk
  KHJ35449.1 396 G--LEKVKKRLLEYLAVLKLKQSINQDIDIKIKKASEERAHEKLEILK 441
                 3..569****************************************98 PP

>> TsaE  Threonylcarbamoyl adenosine biosynthesis protein TsaE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.9   0.0   0.00029      0.17      18      46 ..     444     476 ..     424     481 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.9 bits;  conditional E-value: 0.00029
                 H....TEEEEEEESTTSSHHHHHHHHHHHTT-- CS
        TsaE  18 l....gdvilLeGdLGaGKTtlvrglakalgve 46 
                      + ++lL G+ G+GKT l++++a alg +
  KHJ35449.1 444 RmvdkSPILLLVGPPGVGKTSLAKSVATALGRK 476
                 123324469********************9875 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00027      0.16      28      60 ..     444     475 ..     436     482 .. 0.80

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00027
       AAA_7  28 lllknkkpvllvGptGtGKtviikdllkkldke 60 
                  +++++  +llvGp G+GKt+++k++ ++l  +
  KHJ35449.1 444 RMVDKSPILLLVGPPGVGKTSLAKSVATALG-R 475
                 56667777899**************988887.4 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   0.00038      0.23       3      37 ..     453     489 ..     451     500 .. 0.73

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.00038
                 EEE--TTSSHHHHHHHHHHHH.....GGGEEEEEEEE CS
    NTPase_1   3 fiTGppGvGKtTlvkkvlellkss..gvkvgGfytee 37 
                 ++ GppGvGKt l k v+ +l ++   +++gG+  e 
  KHJ35449.1 453 LLVGPPGVGKTSLAKSVATALGRKfhRISLGGVRDEA 489
                 688******************7764355666666544 PP

>> NB-ARC  NB-ARC domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00034      0.21      20      47 ..     449     473 ..     429     486 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00034
                 SEEEEEEESTTSSHHHHHHHHCCSHCCC CS
      NB-ARC  20 slvvalvGmgGvGKttlakqilnksdev 47 
                 s ++ lvG +GvGKt lak++      +
  KHJ35449.1 449 SPILLLVGPPGVGKTSLAKSVATA---L 473
                 35899***************9876...4 PP

>> AAA_24  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00045      0.27       4      22 ..     451     469 ..     448     480 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00045
      AAA_24   4 kiliyGpsgiGKTtlakel 22 
                  +l++Gp+g+GKT+lak+ 
  KHJ35449.1 451 ILLLVGPPGVGKTSLAKSV 469
                 5799************997 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00048      0.28      29      56 ..     445     472 ..     431     486 .. 0.82

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00048
      AAA_25  29 llpagelallaGapgtGKttlaldlala 56 
                 ++ +  + ll+G+pg+GKt la ++a a
  KHJ35449.1 445 MVDKSPILLLVGPPGVGKTSLAKSVATA 472
                 556667789************9887754 PP

>> AAA_23  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.0   0.00029      0.17      18      52 ..     448     482 ..     432     502 .. 0.80
   2 ?   -2.2   0.0       8.1   4.8e+03      98     137 ..     672     711 ..     607     733 .. 0.59

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00029
      AAA_23  18 skgltlItGpNGaGKTTildAiklaLygetprlsr 52 
                 ++++ l++Gp G GKT++   +  aL+ +++r s 
  KHJ35449.1 448 KSPILLLVGPPGVGKTSLAKSVATALGRKFHRISL 482
                 57999***********************9998875 PP

  == domain 2  score: -2.2 bits;  conditional E-value: 8.1
      AAA_23  98 kkkgkttkkaklelleideleqfisellgskkiilnlilf 137
                 k   +   k+++++l+i++ +++i e+ ++  i   l+++
  KHJ35449.1 672 KYVPQLSVKDIEDILGIEKYDEEIAEKSNRPGIVTGLVAY 711
                 2222333566777777788888888777777666555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (902 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       741  (0.0413297); expected 358.6 (0.02)
Passed bias filter:                      538  (0.0300073); expected 358.6 (0.02)
Passed Vit filter:                        92  (0.00513135); expected 17.9 (0.001)
Passed Fwd filter:                        31  (0.00172904); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              30  [number of targets reported over threshold]
# CPU time: 0.80u 0.29s 00:00:01.09 Elapsed: 00:00:00.45
# Mc/sec: 6083.96
//
Query:       KHJ35450.1  [L=599]
Description: putative plasma membrane g protein coupled receptor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.8e-66  221.4  18.8    1.5e-65  220.8  14.6    2.2  2  Git3        G protein-coupled glucose receptor regulating Gpa
    7.4e-23   80.4   1.3    2.5e-22   78.7   1.3    2.0  1  GPR_Gpa2_C  G protein-coupled glucose receptor regulating Gpa
  ------ inclusion threshold ------
       0.12   12.0   3.5        3.1    7.4   2.8    2.7  3  SUR7        SUR7/PalI family


Domain annotation for each model (and alignments):
>> Git3  G protein-coupled glucose receptor regulating Gpa2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.8  14.6   2.5e-69   1.5e-65       7     201 ..      50     235 ..      44     236 .. 0.97
   2 ?    2.3   0.1      0.02   1.2e+02       7      64 ..     406     463 ..     402     504 .. 0.88

  Alignments for each domain:
  == domain 1  score: 220.8 bits;  conditional E-value: 2.5e-69
        Git3   7 laitassvsilaglvalylllaidkrrrvfRheLillLilvdllkalvlliypvkvlvenkvyassafcqvvGfflavaiegsdlailllavhtallvf 105
                 l++ ++s+s++++ +a+y+++++   rr+fRh+Li+lLi++d++kal+++ yp++ lv+  v+++safcq++Gffl+v+ie sd+a+l++avh al +f
  KHJ35450.1  50 LSFFFASISVISSALAFYWFIKM---RRSFRHDLIMLLIQSDMFKALWFMSYPLVFLVSGPVRSESAFCQISGFFLTVGIEQSDIAVLIIAVHSALHIF 145
                 68899******************...************************************************************************* PP

        Git3 106 kpnlrnkksknvegGLykyrkyvyvisvlvplllasLafinakregYkplsawcylpeepvwyrlvlswiprYiivvaivaiyisiyiyvrreikk 201
                 k      k    e+GLy+yr+++y+i++l+pl +asLaf + + ++Y+ ++a+cylp++p+wy+ +lsw+prY+i+++i+  y+siy+yvr+++++
  KHJ35450.1 146 KN-----KPFGKEEGLYPYRHTAYTIWCLFPLGMASLAFLG-GPHAYVVSEAHCYLPSRPLWYKQTLSWVPRYFIFIIILGTYCSIYYYVRNKFHS 235
                 *8.....7777899***************************.**************************************************9976 PP

  == domain 2  score: 2.3 bits;  conditional E-value: 0.02
        Git3   7 laitassvsilaglvalylllaidkrrrvfRheLillLilvdllkalvlliypvkvlv 64 
                 + +t+s+  i  +l  +   +++  rr  + ++L +l i   +   ++l+ +   v++
  KHJ35450.1 406 IPTTVSVAQIQQSLSHITGRAEMMARRDQIQRQLRFLFIYPLIYMGMWLMPFVSNVIQ 463
                 55789999999999999999***************99999999999999988777765 PP

>> GPR_Gpa2_C  G protein-coupled glucose receptor regulating Gpa2 C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.7   1.3   4.2e-26   2.5e-22       2      76 .]     430     504 ..     429     504 .. 0.97

  Alignments for each domain:
  == domain 1  score: 78.7 bits;  conditional E-value: 4.2e-26
  GPR_Gpa2_C   2 krrkqierqlrsifiYPlaYiilwlfPfvahvlqydyelkekpviwllvvaavvqplnglVDtlvfllrerpwry 76 
                  rr+qi+rqlr +fiYPl Y+ +wl Pfv++v+q+d +   +p + l ++ +v+++++ +VD+ +f+ re+pwr+
  KHJ35450.1 430 ARRDQIQRQLRFLFIYPLIYMGMWLMPFVSNVIQFDDKYALNPPFPLSCITTVSIGIQAFVDCWLFVSREKPWRH 504
                 59**********************************99999999*****************************97 PP

>> SUR7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   2.8   0.00052       3.1     139     203 ..      39      97 ..       9     106 .. 0.60
   2 ?    1.9   0.0     0.025   1.5e+02     126     184 ..     175     238 ..     150     245 .. 0.63
   3 ?   -2.2   0.0      0.45   2.7e+03     115     174 ..     442     496 ..     428     519 .. 0.70

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.00052
        SUR7 139 vspdnsrllsflnlllsvlsflatllaalldtllfvfvrkkinlkefgikaslglkflafaWlal 203
                 +s d++r+l fl ++++ +s+++++la+ + + +   +r+ +      i   +   ++ ++W + 
  KHJ35450.1  39 SSTDEYRILIFLSFFFASISVISSALAFYWFIKMRRSFRHDL------IMLLIQSDMFKALWFMS 97 
                 355666777777777777777777777766555555444444......44444444444444444 PP

  == domain 2  score: 1.9 bits;  conditional E-value: 0.025
        SUR7 126 sfislvvgllaicvspdnsrl....lsflnlllsvlsflatllaalldtllfvfvrkkin.lke 184
                   ++++ g  a +vs  ++ l    l    +l  v   ++ ++  +++  ++++vr+k+  + +
  KHJ35450.1 175 ASLAFLGGPHAYVVSEAHCYLpsrpLWYKQTLSWVPRYFIFIIILGTYCSIYYYVRNKFHsFTK 238
                 555555666666666666664222222222233344567888999999999999*****77433 PP

  == domain 3  score: -2.2 bits;  conditional E-value: 0.45
        SUR7 115 lfilhiialvlsfislvvgllaicvspdnsrllsflnlllsvlsflatllaalldtllfv 174
                 lfi  +i + + ++ +v +++++    d++   ++  + ls ++++++ + a +d  lfv
  KHJ35450.1 442 LFIYPLIYMGMWLMPFVSNVIQFD---DKY--ALNPPFPLSCITTVSIGIQAFVDCWLFV 496
                 555555555555555555555554...222..4677777888888888888888888888 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (599 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       666  (0.0371465); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.58u 0.28s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 4156.53
//
Query:       KHJ35451.1  [L=190]
Description: putative small nuclear ribonucleoprotein-associated protein b [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.7e-17   61.2   0.0    8.1e-17   60.7   0.0    1.2  1  LSM             LSM domain
     0.0056   16.8   4.6     0.0075   16.4   4.6    1.2  1  Keratin_2_head  Keratin type II head


Domain annotation for each model (and alignments):
>> LSM  LSM domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   0.0     9e-21   8.1e-17      10      66 ..      15      93 ..       8      94 .. 0.97

  Alignments for each domain:
  == domain 1  score: 60.7 bits;  conditional E-value: 9e-21
                EEEEEETTSEEEEEEEEEEETTSEEEEEEEEEEETTET......................EEEEEEEEEEEGGGEEEEE CS
         LSM 10 kvtvelkngrelrGtLkgfDqfmNlvLedveetlkdkk......................ekrklglvliRGnnivlis 66
                +++v l++gr+l+G++ +fD++mNlvL d+ee+++ k+                      ekr lgl+++RG +++++s
  KHJ35451.1 15 RLRVTLQDGRQLVGQMLAFDKHMNLVLADTEEFRRVKRratkgasapgasntstsiveseEKRALGLIILRGAHVISLS 93
                689*************************************************************************987 PP

>> Keratin_2_head  Keratin type II head
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.4   4.6   8.4e-07    0.0075      49     134 ..      81     172 ..      42     179 .. 0.57

  Alignments for each domain:
  == domain 1  score: 16.4 bits;  conditional E-value: 8.4e-07
  Keratin_2_head  49 lynlGGsksisisvagggsr..ag.sgfgfgggggggfglGfggGvglgfgagggvGggfGggggl.vGgggfGg.ggfGggGfG.gpvcpp 134
                     l+ l G++ is+sv +      ++  g+++++g+  ++ +G+g + + g g+  g++g    ++ + +G++gf g +gfG gG   ++++pp
      KHJ35451.1  81 LIILRGAHVISLSVESPPPAdpTArLGVKTTSGTVPALAAGTGVARTIGRGVPVGLAGPAATAAPTgYGAPGFPGaPGFGRGGPPpFGGFPP 172
                     55566777777776654332102235666666666666666666544444444444443444443447888886668888766544334444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (190 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       333  (0.0185733); expected 358.6 (0.02)
Passed bias filter:                      255  (0.0142228); expected 358.6 (0.02)
Passed Vit filter:                        30  (0.00167327); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.25s 00:00:00.64 Elapsed: 00:00:00.40
# Mc/sec: 1423.36
//
Query:       KHJ35452.1  [L=556]
Description: putative c6 zinc finger domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    0.00055   20.0   7.8       0.16   12.2   1.1    2.3  2  Zn_clus       Fungal Zn(2)-Cys(6) binuclear cluster domain
  ------ inclusion threshold ------
        0.7    9.0   4.3       0.45    9.7   0.1    2.1  2  Ribophorin_I  Ribophorin I


Domain annotation for each model (and alignments):
>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.2   1.1   1.7e-05      0.16       2      16 ..     146     160 ..     145     163 .. 0.91
   2 !   11.4   0.8     3e-05      0.27      15      38 ..     186     210 ..     181     212 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 1.7e-05
                 S-HHHHHCT---STS CS
     Zn_clus   2 aCdnCrkkKvKCdak 16 
                 aC +C+k + +Cd++
  KHJ35452.1 146 ACVPCKKAHLRCDGM 160
                 9************85 PP

  == domain 2  score: 11.4 bits;  conditional E-value: 3e-05
                 TSSSS-HHHHHCT..HHHCCCCTCCC CS
     Zn_clus  15 akkPaCsnCkkln..leCtfysessk 38 
                 a++P Cs+C++++    C++ + +++
  KHJ35452.1 186 AQRP-CSRCVSNGkkDACVDVQHKKR 210
                 589*.********8888998777765 PP

>> Ribophorin_I  Ribophorin I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.0   1.1     0.042   3.8e+02     108     138 ..      77     106 ..      69     145 .. 0.77
   2 ?    9.7   0.1     5e-05      0.45     151     201 ..     407     460 ..     386     462 .. 0.84

  Alignments for each domain:
  == domain 1  score: 0.0 bits;  conditional E-value: 0.042
                   EES---EESSSB--TTS-EEEEEEEESS--- CS
  Ribophorin_I 108 vlthalrPlPaeikqaekQlllfktsayvls 138
                   vl ++++P+P++ +q+  Q+ l ++s+y+  
    KHJ35452.1  77 VLSNPIQPVPQTSQQQHAQSHL-EFSSYPSQ 106
                   78999********999999743.45555555 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 5e-05
                   ESSS-EEESS...CCC-...ETTEEEE---EEE-SS--S-EEEEEEE-S--EEE CS
  Ribophorin_I 151 lpsskiesytkleepek...sgstltyGpfenvapfslspvsvhyennkplltv 201
                   +p+s+ +sy++  +p +   ++++ +yG  ++++p+s+++vs+ y +++p+  v
    KHJ35452.1 407 IPKSSQPSYQQCLSPYTresQSNESQYGIHSSLQPYSQNQVSFSYPSSSPFGDV 460
                   7888889999888444444588889**************************876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (556 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       414  (0.0230911); expected 358.6 (0.02)
Passed bias filter:                      281  (0.0156729); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.26s 00:00:00.79 Elapsed: 00:00:00.42
# Mc/sec: 3930.11
//
Query:       KHJ35453.1  [L=346]
Description: putative ribonuclease h [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-36  124.2   0.0      9e-36  123.2   0.0    1.5  1  RNase_H   RNase H
    2.5e-35  120.5   4.7    2.8e-18   65.9   1.4    2.4  2  Cauli_VI  Caulimovirus viroplasmin
  ------ inclusion threshold ------
      0.046   13.8   0.0       0.27   11.3   0.0    2.2  2  DUF4377   Domain of unknown function (DUF4377)
       0.12   12.2   0.0       0.32   10.8   0.0    1.7  1  RVT_3     Reverse transcriptase-like
       0.14   12.6   5.5       0.39   11.2   5.5    1.7  1  APC_u15   Unstructured region on APC between APC_crr regions 
       0.15   12.2   1.4        1.5    9.1   1.4    2.3  1  Apc13p    Apc13p protein
       0.24    9.9   2.4       0.33    9.4   2.4    1.3  1  LCD1      DNA damage checkpoint protein


Domain annotation for each model (and alignments):
>> RNase_H  RNase H
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.2   0.0   3.5e-39     9e-36       4     142 ..     197     342 ..     194     343 .. 0.87

  Alignments for each domain:
  == domain 1  score: 123.2 bits;  conditional E-value: 3.5e-39
                 EEEEEEEEEECT.TTCEEEEEEECTT....EEEEEEEC.CCCHHHHHHHHHHHHHHHTT.SCSEEEEEES-HHHHHHHHCCCHHHHHTTSSSETTSSBH CS
     RNase_H   4 vvvYtDGsclgn.pgeggagavlykeg..arnisaple.eaqtnnraELsAvieaLkalksdekvniytDSkYvvkgitqwvhrwkknawkttseqkpv 98 
                 + vYtDGs+++n ++e++ag+++ +++   rn+s+pl+ e+qtn+raEL+Av  aL+   +d++v+i+tDS+Y ++++t+w + w kn+w+t++ +  v
  KHJ35453.1 197 IQVYTDGSSRRNgSKEARAGVGVFFGTndPRNLSEPLQgEQQTNQRAELTAVLRALQICPKDKDVQIFTDSTYSINSLTKWYKIWLKNGWRTSNGF-SV 294
                 679*********99999****6544543466**************************889******************************999999.5* PP

                 TTHHHHHHHHHCHC.....SSEEEEEE-SCCSSSTHHHHHHHHHHHHHH CS
     RNase_H  99 knkdlaellkelak.....kkkvqlkwvkgHaGvpkgNemaDrlAkeaa 142
                 +nkdl +++++l++       k  l+w++gH+ +  gNe+aDrlA++ a
  KHJ35453.1 295 VNKDLVQAIRHLIDcritlGSKTDLTWIRGHSQN-FGNEAADRLAVSSA 342
                 *******999887651212456899*********.6*********9865 PP

>> Cauli_VI  Caulimovirus viroplasmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.9   1.4   1.1e-21   2.8e-18       1      44 []      25      68 ..      25      68 .. 0.99
   2 !   55.6   0.1   1.8e-18   4.7e-15       2      44 .]      86     128 ..      85     128 .. 0.97

  Alignments for each domain:
  == domain 1  score: 65.9 bits;  conditional E-value: 1.1e-21
    Cauli_VI  1 kyYAVakGrepgiYttWdecqkqvkgfpgakyKsFktraeAeaf 44
                k+YAV++G  pgiY+tW+ec +q++gf+ga+yK+F ++++A++f
  KHJ35453.1 25 KFYAVRVGVRPGIYRTWKECYEQIDGFKGARYKAFLNYNDAQDF 68
                9*****************************************99 PP

  == domain 2  score: 55.6 bits;  conditional E-value: 1.8e-18
    Cauli_VI   2 yYAVakGrepgiYttWdecqkqvkgfpgakyKsFktraeAeaf 44 
                 +Y Va+G++pg+Yt+W+e++ q+k ++ + yK+F+traeAe f
  KHJ35453.1  86 FYGVAVGHHPGVYTDWTEASLQIKDIKRPMYKKFPTRAEAEFF 128
                 9***************************************966 PP

>> DUF4377  Domain of unknown function (DUF4377)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.0   0.00011      0.27      13      39 ..      22      52 ..      11      58 .. 0.70
   2 ?   -1.5   0.0       1.1   2.7e+03      25      38 ..      98     111 ..      86     114 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 0.00011
     DUF4377 13 gpaqclqvkeesy....geWeefygqIeGft 39
                 pa+ ++v+        ++W+e+y+qI+Gf+
  KHJ35453.1 22 RPAKFYAVRVGVRpgiyRTWKECYEQIDGFK 52
                55566665544444444*************6 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.1
     DUF4377  25 ygeWeefygqIeGf 38 
                 y +W+e   qI+++
  KHJ35453.1  98 YTDWTEASLQIKDI 111
                 57999999999997 PP

>> RVT_3  Reverse transcriptase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.8   0.0   0.00012      0.32      18      72 ..     219     270 ..     201     280 .. 0.67

  Alignments for each domain:
  == domain 1  score: 10.8 bits;  conditional E-value: 0.00012
       RVT_3  18 virdsnGevllagaeklqgkasveeAElqALlrGLqlalklgirrlvvegDsktv 72 
                 v+   n+ + l+   + +++++++ AEl+A+lr+Lq++ k   + +++ +Ds   
  KHJ35453.1 219 VFFGTNDPRNLSEPLQ-GEQQTNQRAELTAVLRALQICPKD--KDVQIFTDSTYS 270
                 5555555555555555.77899****************987..466666666655 PP

>> APC_u15  Unstructured region on APC between APC_crr regions 5 and 6
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   5.5   0.00015      0.39      16      74 ..     131     190 ..     122     194 .. 0.91

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00015
     APC_u15  16 rKgKeeKe.aeaketskkeqasnqqstnrtQvvqkhpasRsqsKsllqkqttFpqssKdi 74 
                  KgK+ K+  eake+ ++e + +++  +   vv+ + ++R+++K+  +k +  +qssK+ 
  KHJ35453.1 131 TKGKDLKKyLEAKEQEQNEGICEEKEQSELLVVTDDTEERKEPKAKKRKIADSSQSSKEK 190
                 6999976537************************************************86 PP

>> Apc13p  Apc13p protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   1.4   0.00058       1.5      14      54 ..      93     133 ..      86     198 .. 0.83

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00058
      Apc13p  14 hhailaeewnkdrLppddvavplekldpvrteeeedvvpdd 54 
                 hh  ++ +w++  L   d+  p+ k+ p+r+e+e  v+ + 
  KHJ35453.1  93 HHPGVYTDWTEASLQIKDIKRPMYKKFPTRAEAEFFVMTKG 133
                 78889*************************99986665544 PP

>> LCD1  DNA damage checkpoint protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.4   2.4   0.00013      0.33      45     112 ..     133     202 ..     128     272 .. 0.82

  Alignments for each domain:
  == domain 1  score: 9.4 bits;  conditional E-value: 0.00013
                 HHHHCCCHHCHHTTTTTT...H.HHH------TT---SSS--THHHHHHHHH.........HHHTSTTT--T CS
        LCD1  45 leDekkFlenElrslset...k.sqaskksaeedtdnsssvskKkRKieestaedaslslslkkkviklqke 112
                  +D kk+le   ++ +e    + +q+     ++dt++ ++ ++KkRKi +s++  +s++ + ++++i++  +
  KHJ35453.1 133 GKDLKKYLEAKEQEQNEGiceEkEQSELLVVTDDTEERKEPKAKKRKIADSSQ--SSKEKKFNENLIQVYTD 202
                 589999999999999998775324444555667777777888******99864..46777788888877654 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (346 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1183  (0.0659825); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.51u 0.27s 00:00:00.78 Elapsed: 00:00:00.42
# Mc/sec: 2469.66
//
Query:       KHJ35454.1  [L=585]
Description: putative 6- ructo-2-kinase pfk26 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-67  227.6   0.0    5.7e-47  159.9   0.0    2.2  2  6PF2K       6-phosphofructo-2-kinase
    4.3e-28   98.3   0.0    2.8e-22   79.3   0.0    2.7  3  His_Phos_1  Histidine phosphatase superfamily (branch 1)
     0.0046   17.1   0.1       0.05   13.8   0.1    2.2  1  AAA_33      AAA domain
     0.0087   15.5   0.0      0.035   13.6   0.0    1.8  2  KTI12       Chromatin associated protein KTI12


Domain annotation for each model (and alignments):
>> 6PF2K  6-phosphofructo-2-kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.6   0.0   8.6e-22   3.9e-18       4      65 ..      59     120 ..      56     146 .. 0.87
   2 !  159.9   0.0   1.3e-50   5.7e-47      58     222 ..     165     331 ..     152     332 .. 0.94

  Alignments for each domain:
  == domain 1  score: 65.6 bits;  conditional E-value: 8.6e-22
                 XHHHHT..S-EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHHHHHHSS---GGG CS
       6PF2K   4 stvtnlknsklvivlvGLpargKtyiskkltrylkwlgvrtkvFnvgkyrreaskalsdaef 65 
                 ++++++   klv+++vGLpargK+yi+kk+ ryl+w  ++tk+Fnvg+ rr ++ +++ +++
  KHJ35454.1  59 KISQKDVGAKLVVIMVGLPARGKSYITKKIQRYLSWQQHSTKIFNVGNRRRVVVGSNEPSSS 120
                 567788899******************************************99988544433 PP

  == domain 2  score: 159.9 bits;  conditional E-value: 1.3e-50
                 SS---GGGGSTT-HHHHHHHHHHHHHHHHHHHHHHHTS--SEEEEES---SHHHHHHHHHHHHHTT..-EEEEEEEE--HHHHHHHHHHHHTTTSGGGT CS
       6PF2K  58 kalsdaeffrpdneealklreklalaalkdllaylneeegqvaifDAtNttrerRklilefveenn..lkvlflesicsdeeiikeNikevklsspDYk 154
                 + +++aeff+p+ne+a ++r+++a a+l++ll++l  ++g+v+i DAtN+t++rRk +++++++++  l++lf+es+c+de+++++N+++++ + pDY 
  KHJ35454.1 165 HMEQSAEFFDPKNEQASQFRDQVAIATLDELLDFLLLDNGSVGILDATNSTIKRRKALFKQIKDREpkLNILFIESVCQDEKLLEANMHLKLRG-PDYR 262
                 4589**********************************************************99987899*********************999.**** PP

                 TS-HHHHHHHHHHHHHHHHTT-----.TTTTTTSEEEEEETTTTEEEEE---SHHHHHHHHHHTT---S CS
       6PF2K 155 dketeeaikdflkRlenyekqyepld.deedeelsyIkvidvgkslvvnnvqgylqsrivyyllNihlk 222
                 +k+++++++df kR++ y ++yepl   eed+ ++yIk+idvg++++ +++qg+l+  i  yl+ ++l 
  KHJ35454.1 263 GKDPQKSLADFRKRVAAYGSAYEPLGdYEEDHGMQYIKMIDVGRKIIHFRLQGFLACGIASYLFTFNLS 331
                 *************************96799********************************9987765 PP

>> His_Phos_1  Histidine phosphatase superfamily (branch 1)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0       1.1     5e+03     108     128 ..     259     279 ..     245     280 .. 0.68
   2 !   15.9   0.0   1.7e-06    0.0077       1      42 [.     335     374 ..     335     382 .. 0.86
   3 !   79.3   0.0   6.3e-26   2.8e-22      48     191 ..     417     560 ..     407     563 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 1.1
                 HH-GGG-B.S-BHHHHHHHHHH CS
  His_Phos_1 108 padvrppg.gEsledvaaRvaa 128
                 p d+r ++   sl+d+++Rvaa
  KHJ35454.1 259 P-DYRGKDpQKSLADFRKRVAA 279
                 3.3444445899*******975 PP

  == domain 2  score: 15.9 bits;  conditional E-value: 1.7e-06
                 EEEEE---BTTB--....TT----B-HHHHHHHHHHHHHHTT CS
  His_Phos_1   1 lyLvRHGetewnaegrlqgrtdvpLteeGreqAealaerlag 42 
                 ++++RHG++  n+ g+++g  d++LteeG+  A al +++ +
  KHJ35454.1 335 IWITRHGKSVDNTLGKIGG--DSDLTEEGEHFATALYNFVDK 374
                 89************96665..889***********9887665 PP

  == domain 3  score: 79.3 bits;  conditional E-value: 6.3e-26
                 EEE-SSHHHHHHHHHHHHCTT--EEE-GGGS----GGGTT-B.HHHHHH..HSHHHHHHHHH-GGG-B..S-BHHHHHHHHHHHHHHHHHHTTTSEEEE CS
  His_Phos_1  48 iysSplkRarqTaeliaealglpveldegLrEidfGdweglttaeiaeeypeeleawlrdpadvrppg..gEsledvaaRvaaaleelaarhegetvlv 144
                 i++S lkR + Ta+ +++  + + +++e L+E++ G +eglt + ia+eypee++++  ++  + +pg  gE + +v +R++++++e+++  +   vl+
  KHJ35454.1 417 IWTSMLKRSISTAKEFCDDENYDAKHWEMLNEMHAGSFEGLTDDYIASEYPEEYAKRAMNRLGYIYPGvgGEGYLQVISRLRDMVREIERIKDH--VLI 513
                 79**************************************************************************************999875..*** PP

                 EE-HHHHHHHHHHHHT--GGGGGGB---TT-EEEEEE-SS-EEEEEE CS
  His_Phos_1 145 VsHggvirallarllglpleelrrleldnaslsvlefdeggwrlvrl 191
                 + H  v r+l+a++++l+ e++ +le++   l  +e ++ g +++++
  KHJ35454.1 514 IGHRSVCRVLMAYFMDLQREAIADLEIPLGMLFSIEPKPYGIVFHAY 560
                 ********************************999999999887765 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.8   0.1   1.1e-05      0.05       1     118 [.      70     255 ..      70     279 .. 0.58

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.1e-05
      AAA_33   1 lvllvGlpGsGKstlaerllkklgavllssdt........................................lrrrlfgtdqqskt............. 46 
                 +v++vGlp+ GKs+  +++ + l ++  s+ +                                        l                          
  KHJ35454.1  70 VVIMVGLPARGKSYITKKIQRYLSWQQHSTKIfnvgnrrrvvvgsnepsssqktrpiprntiidpptqaahiL------------Lkgvnplhmqpkka 156
                 89****************9665553333333333333333333333355555555555555555555555551............04444444444445 PP

      AAA_33  47 ......................dytrvl.drlyqilnelarkalsagrn.vildatnlsrrerarflklarrlgvpvrivvvet...deetlkeRlakR 118
                                       + ++++ + ++++l el++  l  +++  ildatn + ++r++++k  ++ + +  i+++e+   de++l+++ + +
  KHJ35454.1 157 srfsldenhmeqsaeffdpkneQASQFRdQVAIATLDELLDFLLLDNGSvGILDATNSTIKRRKALFKQIKDREPKLNILFIESvcqDEKLLEANMHLK 255
                 55555555555666666665543333331447777777777766666663799******9999999999998887777776653222566666655555 PP

>> KTI12  Chromatin associated protein KTI12
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.6   0.0   7.8e-06     0.035       4      36 ..      71     103 ..      69     130 .. 0.78
   2 ?   -1.4   0.0      0.28   1.3e+03      68     114 ..     201     249 ..     199     263 .. 0.72

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 7.8e-06
                 EEEE--TTSSHHHHHHHHHHHHHHTT--EEEE- CS
       KTI12   4 vvltGlPssGKstrakeLakaleeekrsvvvid 36 
                 v++ GlP+ GKs ++k+++++l+ ++ s  + +
  KHJ35454.1  71 VIMVGLPARGKSYITKKIQRYLSWQQHSTKIFN 103
                 899*******************99777766654 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.28
                 HTT.SEEEE-S---SHHHHHHHHHHHHHTT-EEEE..EEEE--HHHHHH CS
       KTI12  68 LskekvVIvDslnyikgfRYeLyciakaakttlcv..vyvvapldvlvk 114
                 L +  v I+D++n +   R  L+   k  + +l +  +  v++ ++l++
  KHJ35454.1 201 LDNGSVGILDATNSTIKRRKALFKQIKDREPKLNIlfIESVCQDEKLLE 249
                 5677888******999999999999887765554411445555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       539  (0.030063); expected 358.6 (0.02)
Passed bias filter:                      468  (0.026103); expected 358.6 (0.02)
Passed Vit filter:                        50  (0.00278878); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.44
# Mc/sec: 4006.08
//
Query:       KHJ35455.1  [L=304]
Description: hypothetical protein EV44_g3206 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (304 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       516  (0.0287802); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.40
# Mc/sec: 2265.88
//
Query:       KHJ35456.1  [L=378]
Description: hypothetical protein EV44_g3432 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     0.0032   18.0  17.3      0.057   14.0   0.1    3.3  3  Stc1      Stc1 domain


Domain annotation for each model (and alignments):
>> Stc1  Stc1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   3.3   0.00083        15      54      84 ..       6      36 ..       2      37 .. 0.92
   2 !    5.9   1.9     0.001        18      49      84 ..     111     145 ..      78     146 .. 0.86
   3 !   14.0   0.1   3.2e-06     0.057      52      84 ..     189     220 ..     155     221 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.00083
                E-SSS--EEESTTS-HHHHHS.SS---HHHH CS
        Stc1 54 eCsaCqktkpldeFsksqrrkpdaarCkdCv 84
                 C+ C +++p ++F k+  +++  ++C +C 
  KHJ35456.1  6 LCTTCLQSQPSSNFLKNVVSNTYFKTCSTCR 36
                5********************99999****6 PP

  == domain 2  score: 5.9 bits;  conditional E-value: 0.001
                 ---EEE-SSS--EEESTTS-HHHHHS.SS---HHHH CS
        Stc1  49 qateleCsaCqktkpldeFsksqrrkpdaarCkdCv 84 
                 +   ++C+ C+k    d F    r++ + ++C+dC 
  KHJ35456.1 111 NSNFIHCKGCKKNCHPDLFHDPIRNR-SFKQCTDCR 145
                 455599**************999999.9999****5 PP

  == domain 3  score: 14.0 bits;  conditional E-value: 3.2e-06
                 EEE-SSS--EEESTTS-HHHHHS.SS---HHHH CS
        Stc1  52 eleCsaCqktkpldeFsksqrrkpdaarCkdCv 84 
                  ++C +C+   p ++F+++  ++   a+C +C 
  KHJ35456.1 189 YIHCRMCRLNYPSESFANAASNS-LYATCSECR 220
                 589****************9999.9*******5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (378 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       735  (0.040995); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.47u 0.23s 00:00:00.70 Elapsed: 00:00:00.38
# Mc/sec: 3014.14
//
Query:       KHJ35457.1  [L=256]
Description: putative protein ssu72 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    7.2e-84  280.1   0.0    8.3e-84  279.9   0.0    1.0  1  Ssu72     Ssu72-like protein


Domain annotation for each model (and alignments):
>> Ssu72  Ssu72-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  279.9   0.0   4.6e-88   8.3e-84       1     191 []      27     256 .]      27     256 .] 0.98

  Alignments for each domain:
  == domain 1  score: 279.9 bits;  conditional E-value: 4.6e-88
                 SEEEEEESSSSSHHHHHHHHHHHTT-EEEEEE-SSSEEEEESSTTSEEEE-T.TS-HHHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-SS--BGGG... CS
       Ssu72   1 lkfavvcasnqnrsmeahkvLkkagfkvkSfGtgsavrLPgpsidkpnvyeF.gtsyeeiyedLkskdkelyeanGllkmldrnrkiKkaPerwqe... 95 
                 lkf++vcasnqnrsme+h +L++a+++v+SfGtgs vrLPgpsi++pnvy+F +tsy+++y++L++kd +ly+anGll+mldrnr++K+ Perwq+   
  KHJ35457.1  27 LKFCTVCASNQNRSMESHLRLASANYPVISFGTGSLVRLPGPSITQPNVYQFnKTSYDSMYKELEAKDPRLYRANGLLNMLDRNRNVKWGPERWQDwqv 125
                 69**************************************************99********************************************* PP

                 ...............---.--SEEEESSHHHHHHHHHHHHHS--SS-EEEEEEEE---SSHHHHHHHHHHHHHHHHHHHT-SS................ CS
       Ssu72  96 ...............aeekkfdvvitceervfdavvedllsreselnrpvhvinvdikDnheeAlvgakaileLakaleeaede............... 164
                                +e + +dvvitceer++davv+dllsr+s+lnrpvhvinvdikDnhe+Alvg++ il+La++l+ea+ e               
  KHJ35457.1 126 glprlehskdqgsegTEGGFVDVVITCEERCWDAVVDDLLSRGSPLNRPVHVINVDIKDNHESALVGGRGILDLANSLNEAAIEeralnpsgfdsgnsa 224
                 **********999988889*************************************************************998889************* PP

                 ....HHHHHHHHHHHHHHHHT--.EEEEEEEE CS
       Ssu72 165 ....leeevkeilaefeektkkl.llytvafy 191
                     ++e+v+ei+ +++ ++++l +++t+a++
  KHJ35457.1 225 srtgFDERVPEIIGDWQGRWPNLpAVWTLAWF 256
                 *******************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (256 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       394  (0.0219756); expected 358.6 (0.02)
Passed bias filter:                      361  (0.020135); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.40
# Mc/sec: 1897.33
//
Query:       KHJ35458.1  [L=153]
Description: putative rna-binding protein 8a [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-14   54.0   0.0    1.6e-14   53.5   0.0    1.3  1  RRM_1     RNA recognition motif. (a.k.a. RRM, RBD, or RNP dom
  ------ inclusion threshold ------
      0.018   15.1   0.0      0.031   14.3   0.0    1.4  1  RRM_3     RNA binding motif


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.5   0.0   1.7e-18   1.6e-14       1      65 [.      41     106 ..      41     111 .. 0.94

  Alignments for each domain:
  == domain 1  score: 53.5 bits;  conditional E-value: 1.7e-18
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEET CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklg 65 
                 + V+n++++++ee++++ Fs++G+ik++ l  d +tg  kg+a +e+++ ++A++A++  ++ kl 
  KHJ35458.1  41 ILVTNVHEEASEEDISDKFSEYGDIKNLHLNLDrRTGYVKGYALIEYPTLDEARAAIDGAHKSKLL 106
                 68********************************************************99997765 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.0   3.5e-06     0.031       1      65 [.      38     108 ..      38     118 .. 0.82

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 3.5e-06
                 --EEEEEE-SSS--HHHHHHHCHCCS-ECEEEE-TTSSEEEEE......ESSHHHHHHHHHHHHHC-B-CC CS
       RRM_3   1 GvilklsGlnkelsredikellsklgevayvdyekgdkegevr......Fkedeeakkalekateaklkik 65 
                 G i+ ++ +++e s edi + +s++g+++   ++ +  +g+v+      + + +ea++a++ a ++kl  +
  KHJ35458.1  38 GWIILVTNVHEEASEEDISDKFSEYGDIKNLHLNLDRRTGYVKgyalieYPTLDEARAAIDGAHKSKLLEQ 108
                 678888889*************************9999999865444448888999999999988876544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (153 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       358  (0.0199677); expected 358.6 (0.02)
Passed bias filter:                      303  (0.0169); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.37
# Mc/sec: 1241.61
//
Query:       KHJ35459.1  [L=567]
Description: putative glycosyl hydrolase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-22   79.0  13.5      2e-15   57.2   7.6    3.1  2  Glyco_hydro_76  Glycosyl hydrolase family 76


Domain annotation for each model (and alignments):
>> Glyco_hydro_76  Glycosyl hydrolase family 76
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.8   0.4   3.2e-09   5.7e-05     111     170 ..     176     231 ..     170     242 .. 0.86
   2 !   57.2   7.6   1.1e-19     2e-15     171     292 ..     257     412 ..     234     487 .. 0.77

  Alignments for each domain:
  == domain 1  score: 22.8 bits;  conditional E-value: 3.2e-09
                     HHHHHHHHHHHHHHHHCB-SCSCCS-BBSEC..ESS--SEEEHHHHHHHHHHHHHHHHHH CS
  Glyco_hydro_76 111 pswLalAqavfntqasrwdeetcgGGlrWqiftwnsgydyknsisngplfqlaarLaryt 170
                      ++  +A+ +++  a  w++  c+GG+ W+      +  ykn+i n  +  +++ ++ y 
      KHJ35459.1 176 SDFAHRARVFWDLAAHGWNTALCNGGMIWNP----RQLPYKNAITNELYISASIAMYLYF 231
                     5677899999*999999************87....7888*********999999999986 PP

  == domain 2  score: 57.2 bits;  conditional E-value: 1.1e-19
                     --CHHHHHHHHHHHHHHHHSCSBTTTS-B-SEEE.........TTTCCEEEE---HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH.HHHC CS
  Glyco_hydro_76 171 gnetYlewAekvwdWvedvgliddedwlvyDgas.........vednctdinklqwtYnqGtylsgaaylynaTgdekWldrvkgllnat.lstf 255
                     ++ +Yl+ A + ++W++++++  ++d+l+ Dg +         ++++c + n++ +tYnqG++lsg + ly aTg  ++l++ ++l++++ ++t 
      KHJ35459.1 257 QDVKYLNAAIEAYKWLYAINMT-NDDGLFVDGFHisgwnttfsNNTQCDERNEMVYTYNQGVLLSGQYGLYVATGVRSYLEDGHKLISNViRATG 350
                     6778*****************7.***********9*************************************************99999963333 PP

                     EEC.........................TTEEEEEE-TTSTTCCTTHHHHHHHHHHHHHHHH CS
  Glyco_hydro_76 256 fpd.........................gnilyevacepsekcnnDqrsFkgilarwlalta 292
                     ++                           n + e ac  s +c +D ++Fkgi+++ l ++ 
      KHJ35459.1 351 WDIdnanissslsksnlkpqqdkwyglgRNGILEEACDASATCSQDSQTFKGIFFHHLTKFC 412
                     3334589999999999999********95555577****999**************887732 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (567 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      332  (0.0185175); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 4202.23
//
Query:       KHJ35460.1  [L=332]
Description: putative protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-10   41.0   0.3    7.3e-10   39.7   0.0    1.8  3  Pal1      Pal1 cell morphology protein


Domain annotation for each model (and alignments):
>> Pal1  Pal1 cell morphology protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0      0.59   1.1e+04      50      67 ..      41      58 ..      25     102 .. 0.58
   2 !   39.7   0.0   4.1e-14   7.3e-10       1      59 [.     108     164 ..     108     177 .. 0.86
   3 ?   -3.6   0.0         1   1.8e+04      55      72 ..     236     253 ..     228     270 .. 0.64

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 0.59
        Pal1 50 lggagklnkksaldevfG 67
                 + +++++ k+++ + fG
  KHJ35460.1 41 KNQSPPTQPKKNKLNEFG 58
                333333333333333344 PP

  == domain 2  score: 39.7 bits;  conditional E-value: 4.1e-14
        Pal1   1 DtiDkLDvtglfgglfHHdGPfDAvtphrNknskaaPvlAfpkdgannslggagklnkk 59 
                 DtiD LD ++ fg ++HH GP+DA    rN+++++aPv A  k + n+++++++k+  k
  KHJ35460.1 108 DTIDSLDRSA-FGLSYHHAGPYDATLLARNRTRRHAPVEAL-KSSNNEAIKATPKEFIK 164
                 9******977.6889*************************8.67899999987665544 PP

  == domain 3  score: -3.6 bits;  conditional E-value: 1
        Pal1  55 klnkksaldevfGredee 72 
                   +k+++ ++v G+ ++ 
  KHJ35460.1 236 AIKKDKQRHTVSGNINNY 253
                 355566666666665444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (332 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       524  (0.0292264); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.36
# Mc/sec: 2729.60
//
Query:       KHJ35461.1  [L=99]
Description: hypothetical protein EV44_g5318 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (99 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      342  (0.0190752); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.20s 00:00:00.54 Elapsed: 00:00:00.34
# Mc/sec: 873.19
//
Query:       KHJ35462.1  [L=554]
Description: putative swr1-complex protein 4 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.7e-30  104.4   2.1    2.7e-30  104.4   2.1    2.3  2  SANT_DAMP1_like  SANT/Myb-like domain of DAMP1
  ------ inclusion threshold ------
      0.058   13.6   0.2       0.31   11.3   0.2    2.4  1  Myb_DNA-bind_6   Myb-like DNA-binding domain
       0.14   12.6   0.5        1.1    9.8   0.5    2.6  1  DUF836           Glutaredoxin-like domain (DUF836)
       0.65   10.2   5.3       0.79   10.0   0.3    3.3  2  Myb_DNA-binding  Myb-like DNA-binding domain


Domain annotation for each model (and alignments):
>> SANT_DAMP1_like  SANT/Myb-like domain of DAMP1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.4   2.1     6e-34   2.7e-30       2      80 .]     118     213 ..     117     213 .. 0.97
   2 ?    1.0   0.2      0.11   4.9e+02       5      40 ..     235     269 ..     231     273 .. 0.75

  Alignments for each domain:
  == domain 1  score: 104.4 bits;  conditional E-value: 6e-34
  SANT_DAMP1_like   2 aFakfnkkvevpeytdeeYeellkeedWtkeetdyLfdlckeydlrfvviaDryelek.................kkkrsledlkeryYsvark 78 
                       Fa+fn+k++v++y++++Y ++l+++dWtk+etdyL++l++eydlr++vi+Dry++                   k++rs+ed+keryY+v++k
       KHJ35462.1 118 IFARFNVKIKVVSYNENQYISHLQNPDWTKDETDYLMNLVEEYDLRWPVIWDRYDYLLpssetkcgtneevtlptKNTRSMEDIKERYYKVSAK 211
                      5*******************************************************77999**************99***************99 PP

  SANT_DAMP1_like  79 ll 80 
                      ++
       KHJ35462.1 212 IM 213
                      75 PP

  == domain 2  score: 1.0 bits;  conditional E-value: 0.11
  SANT_DAMP1_like   5 kfnkkvevp..eytdeeYeellkeedWtkeetdyLfdl 40 
                      kfnk+ e+   +y +++++++++e+   kee + L++l
       KHJ35462.1 235 KFNKQQEISrkRYAEATFHRTIEEA---KEEENLLLEL 269
                      8999888765589999999999975...6666666666 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.2   6.9e-05      0.31       1      47 [.     145     212 ..     145     230 .. 0.84

  Alignments for each domain:
  == domain 1  score: 11.3 bits;  conditional E-value: 6.9e-05
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknI.........aealn.............rRtpkqcfdrwknkLrpki 47 
                     Wt++E++ L +lve+y   W  I         +++ +              R+++++++r+ + +++ki
      KHJ35462.1 145 WTKDETDYLMNLVEEYDLRWPVIwdrydyllpSSETKcgtneevtlptknTRSMEDIKERYYK-VSAKI 212
                     ********************9998887777775555477888888999999999999999999.77774 PP

>> DUF836  Glutaredoxin-like domain (DUF836)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.8   0.5   0.00024       1.1      35      74 ..     113     149 ..     100     235 .. 0.91

  Alignments for each domain:
  == domain 1  score: 9.8 bits;  conditional E-value: 0.00024
                 ETTT-CCCHCCCCTTTTEEEECTTCGGB.TCCECGCCB-H CS
      DUF836  35 DIakdeeleakYgleipvlalegvkktsslleelswrlde 74 
                 DI++  + +a+++++i+v+++++ ++++s l++  w  de
  KHJ35462.1 113 DIED--SIFARFNVKIKVVSYNE-NQYISHLQNPDWTKDE 149
                 5554..789**************.6788878888877665 PP

>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.3   0.00018      0.79       3      44 ..     144     207 ..     143     208 .. 0.71
   2 ?   -1.9   0.7      0.92   4.1e+03       6      15 ..     260     269 ..     260     272 .. 0.86

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00018
                      SSBHHHHHHHHHHHHHHTTCHHHHHH....HHTS..................S-HHHHHHHHHH CS
  Myb_DNA-binding   3 kWteeEdelLleavkkhGnrWkkIae....rlgg..................Rtekqcrsrwrn 44 
                       Wt++E + L ++v+++  rW  I +     l++                  R+ +++++r+++
       KHJ35462.1 144 DWTKDETDYLMNLVEEYDLRWPVIWDrydyLLPSsetkcgtneevtlptkntRSMEDIKERYYK 207
                      5*****************9999998845552232445555555566666666888888888876 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.92
                      HHHHHHHHHH CS
  Myb_DNA-binding   6 eeEdelLlea 15 
                      +eE++lLle+
       KHJ35462.1 260 KEEENLLLEL 269
                      6999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (554 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       962  (0.0536561); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.54u 0.24s 00:00:00.78 Elapsed: 00:00:00.38
# Mc/sec: 4379.98
//
Query:       KHJ35463.1  [L=380]
Description: hypothetical protein EV44_g1210 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (380 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       620  (0.0345808); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.46u 0.22s 00:00:00.68 Elapsed: 00:00:00.38
# Mc/sec: 3027.90
//
Query:       KHJ35464.1  [L=1265]
Description: putative ste ste11 cdc15 protein kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.8e-72  242.2   0.0    1.4e-71  241.0   0.0    1.6  2  Pkinase         Protein kinase domain
    4.7e-48  163.7   0.0    7.8e-48  163.0   0.0    1.3  1  Pkinase_Tyr     Protein tyrosine kinase
    0.00011   21.1   0.0    0.00019   20.3   0.0    1.3  1  Pkinase_fungal  Fungal protein kinase
     0.0017   17.7   0.0       0.11   11.7   0.0    2.3  2  Kinase-like     Kinase-like
  ------ inclusion threshold ------
      0.036   14.4   0.2        1.9    8.9   0.1    4.0  6  HEAT_2          HEAT repeats
        6.8    6.7   7.0         14    5.7   7.0    1.5  1  YL1             YL1 nuclear protein


Domain annotation for each model (and alignments):
>> Pkinase  Protein kinase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.0   0.0   4.6e-75   1.4e-71       1     264 []      53     305 ..      53     305 .. 0.96
   2 ?   -3.2   0.1       1.4   4.2e+03     211     241 ..     979    1010 ..     925    1017 .. 0.59

  Alignments for each domain:
  == domain 1  score: 241.0 bits;  conditional E-value: 4.6e-75
                 EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEECHCHCHHHHHHHHHHHHHHHHHSCTTB--EEEEEEESSEEEEEEE--TTEBHHHHHHHHSS--HHH CS
     Pkinase   1 yekleklGeGsfGkVykaveketgkivAvKkikkekakkkkekkvlrEikilkklkhpnivrlyevfeekdelylvleyveggeladllerkgslseee 99 
                 y+  e lG+G+fG+Vyka++  tg+ vAvK+ik  +  k++ k + +Ei +lk+l+h+niv+++++++++d l ++ley+e+g+l+++ +  g+++e+ 
  KHJ35464.1  53 YHLGECLGKGAFGSVYKAFNWGTGEAVAVKQIKLGDLPKSELKMIEAEIDLLKNLNHDNIVKYLGFVKSSDCLNIILEYCENGSLHSICKSYGKFPENL 151
                 788899*********************************999********************************************************* PP

                 HHHHHHHHHHHHHHHHHTTEE-SS-SGGGEEEETTTEEEE-SGTTSEESSSSCS.BCTTTSCGGGS-HHHHTTSCBSHHHHHHHHHHHHHHHHHSS-ST CS
     Pkinase 100 akkiakqilegleylHskgiiHrDlKpeNiLidekgelKitDFGlakelesssk.ltsfvgtseYlAPEvlkeneyskkvDvWslGvilyelltgkppf 197
                 +  ++ q+l gl+ylH++g+iHrD+K +NiL  ++g++K++DFG+++    + +   ++vgt++++APE+++ ++ ++++D+WslG++++ell gkpp+
  KHJ35464.1 152 VGVYMGQVLLGLQYLHDQGVIHRDIKGANILTTKDGKVKLADFGVSTSTLAGADkEAQVVGTPYWMAPEIIQLSGATPASDIWSLGCTVIELLEGKPPY 250
                 **********************************************987776665899***************************************** PP

                 TTSSHHHHHHHHHHTHHHHHHHCTSHH...HHHTTS-HHHHHHHHHHT-SSGCCSTTHHHHHTSGGG CS
     Pkinase 198 sgekgkekvekeldqlekilkilgetkeklpeaseiseeakdllkkllkkdpkkRltaeellqhpyl 264
                 +          +l  + +++ i++  + + p ++ +s+ a+d+l ++++kdp+ R++a++ll+h ++
  KHJ35464.1 251 Y----------KLAPMPALFAIVN--DDHPPLPEGVSPAARDFLIQCFQKDPNLRVSARKLLKHAWI 305
                 *..........6777778888884..589999**********************************7 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 1.4
                  HTHHHHHHHCT.SHH...HHHTTS-HHHHHHH CS
     Pkinase  211 dqlekilkilg.etkeklpeaseiseeakdll 241 
                  + +e ++++l   +kek+p+ +eis+++++ +
  KHJ35464.1  979 NAIELLIDLLSsSMKEKSPHFREISNQVLNTM 1010
                  22333333333445555555555555555544 PP

>> Pkinase_Tyr  Protein tyrosine kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.0   0.0   2.6e-51   7.8e-48       2     257 ..      54     301 ..      53     303 .. 0.92

  Alignments for each domain:
  == domain 1  score: 163.0 bits;  conditional E-value: 2.6e-51
                  EEEEEEEEESSEEEEEEEEETTTTSSEEEEEEEEESTTSSHHH.HHHHHHHHHHHHTS-BTTB--EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT CS
  Pkinase_Tyr   2 elgkklGeGafGkVvegtlkgekekkevkVavKtlkeeateee.keelleeakimkklkhpnivkllgvctkeepllivteyvkgGdLlkfLrkkeke 98 
                  +lg+ lG+GafG+V+++        + + VavK++k +   ++  +++  e++++k+l+h+nivk+lg++ +++ l i++ey+++G+L++  ++    
   KHJ35464.1  54 HLGECLGKGAFGSVYKAFNW----GTGEAVAVKQIKLGDLPKSeLKMIEAEIDLLKNLNHDNIVKYLGFVKSSDCLNIILEYCENGSLHSICKSY--G 145
                  57899************988....7999*******976655551666666*****************************************9997..8 PP

                  TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEEETTEEEE-STTTHEETTTSSEEEETTSSTSGGGGS-HHHHHHSEEEHHHHHHHHHHHHH CS
  Pkinase_Tyr  99 kltlkdllsfalqvAkGmeyLeskklvHrdlaarNvLlsenkvvkisDfGLardiekddeyvkkeeaklpvkWmapEslkekkftsksDvWsfGvllw 196
                  k+  + +  ++ qv  G++yL+++ ++Hrd+   N+L +++ +vk++DfG++ ++       k+ +      WmapE+++ +  t +sD+Ws G +++
   KHJ35464.1 146 KFPENLVGVYMGQVLLGLQYLHDQGVIHRDIKGANILTTKDGKVKLADFGVSTST--LAGADKEAQVVGTPYWMAPEIIQLSGATPASDIWSLGCTVI 241
                  99999999999******************************************99..445556667777889************************** PP

                  HHHTTSSGTTTTSHHHHHHHHHHTTEES-BBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH CS
  Pkinase_Tyr 197 EiftlgespypglkneevleklkegkrlekpekcpeelyelmkkcweedpeeRptfselve 257
                  E+++ g+ py +l ++ +l ++ ++ + + pe ++++  +++ +c+++dp+ R + ++l++
   KHJ35464.1 242 ELLE-GKPPYYKLAPMPALFAIVNDDHPPLPEGVSPAARDFLIQCFQKDPNLRVSARKLLK 301
                  ***9.*************************************************9998875 PP

>> Pkinase_fungal  Fungal protein kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.3   0.0   6.5e-08   0.00019     314     392 ..     158     228 ..     147     236 .. 0.84

  Alignments for each domain:
  == domain 1  score: 20.3 bits;  conditional E-value: 6.5e-08
  Pkinase_fungal 314 DaIkghrsLflkagiLHrDiSenNilitdskkegerkglLiDLDlakelsddssesgarertGTleFmaievlkgeeHs 392
                     +++ g++ L+ ++g++HrDi   Nil t     ++ k  L+D+ + +++     ++++ + +GT+++ma e+++ +  +
      KHJ35464.1 158 QVLLGLQYLH-DQGVIHRDIKGANILTT-----KDGKVKLADFGVSTSTL--AGADKEAQVVGTPYWMAPEIIQLSGAT 228
                     5678999***.****************9.....789999***99998888..56777789***********99865555 PP

>> Kinase-like  Kinase-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.5   0.0     0.013        38      11      89 ..      50     124 ..      43     128 .. 0.77
   2 !   11.7   0.0   3.8e-05      0.11     158     189 ..     164     195 ..     154     242 .. 0.87

  Alignments for each domain:
  == domain 1  score: 3.5 bits;  conditional E-value: 0.013
  Kinase-like  11 ertlvrgellkkgdrsvvfevkdqetgeplavkvfllpseaskkdlerlkeqelairllrgknpeqAkdhlrlllpfdl 89 
                   r +  ge l+kg ++ v+++ +  tge +avk+  l +  +k++l+ ++ +   i ll++ n  +  ++l +++++d 
   KHJ35464.1  50 LRDYHLGECLGKGAFGSVYKAFNWGTGEAVAVKQIKLGDL-PKSELKMIEAE---IDLLKNLNHDNIVKYLGFVKSSDC 124
                  5778899***************************999865.56777666554...444445677777778888888776 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 3.8e-05
  Kinase-like 158 anLqakglvhgkftvdnllldekgglmlggft 189
                  ++L+++g++h +++  n+l  ++g+++l +f+
   KHJ35464.1 164 QYLHDQGVIHRDIKGANILTTKDGKVKLADFG 195
                  89****************************96 PP

>> HEAT_2  HEAT repeats
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.9   0.0       3.1   9.2e+03      50      72 ..     111     133 ..     110     136 .. 0.65
   2 ?   -2.3   0.0       2.1   6.2e+03      61      79 ..     276     294 ..     273     300 .. 0.69
   3 ?   -3.1   0.0       3.7   1.1e+04      26      45 ..     610     629 ..     608     630 .. 0.80
   4 ?   -2.3   0.0         2   6.1e+03      36      74 ..     801     851 ..     796     857 .. 0.44
   5 ?   -2.1   0.0       1.7   5.1e+03      24      42 ..     972     990 ..     966    1008 .. 0.69
   6 ?    8.9   0.1   0.00063       1.9       3      58 ..    1158    1223 ..    1156    1238 .. 0.86

  Alignments for each domain:
  == domain 1  score: -2.9 bits;  conditional E-value: 3.1
      HEAT_2  50 aaaeaLgaigdpealpaLkelld 72 
                 +++++Lg +++++ l++ +e++ 
  KHJ35464.1 111 NIVKYLGFVKSSDCLNIILEYCE 133
                 46777777777777666666654 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 2.1
      HEAT_2  61 pealpaLkellddddddvv 79 
                 p+a ++L ++++ d++ +v
  KHJ35464.1 276 PAARDFLIQCFQKDPNLRV 294
                 6777777777777776555 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 3.7
      HEAT_2  26 rignpealpaLvellededp 45 
                 +i+  ++++ + +++eded 
  KHJ35464.1 610 QIHRARSVDQIQKFAEDEDD 629
                 67788889999999999885 PP

  == domain 4  score: -2.3 bits;  conditional E-value: 2
      HEAT_2  36 Lvell.ededpavRraaaeaLgaig...........dpealpaLkellddd 74 
                 +++++ +  + ++R +aa    ++            +   l++L e ld+d
  KHJ35464.1 801 ITKFAaRQYSNEIRLEAAAFVRQMYqtstltlqmfvSAGGLNVLVEFLDED 851
                 555444555666666666555444312222222222333445555544444 PP

  == domain 5  score: -2.1 bits;  conditional E-value: 1.7
      HEAT_2  24 LgrignpealpaLvelled 42 
                 L +++   a+++L++ll++
  KHJ35464.1 972 LDNLHAANAIELLIDLLSS 990
                 5566666777777777754 PP

  == domain 6  score: 8.9 bits;  conditional E-value: 0.00063
      HEAT_2    3 aLlqalendpdpevrraairaLgrignp...........ealpaLvellededpavRraaaeaLgai 58  
                   L+q l +++   vr + +r   +i +p           ++++a+++l+e++++   r+ ae L++ 
  KHJ35464.1 1158 GLIQKL-SHKKAVVRLNLLRIVRSIIDPkdenslgitdhRLFEAIRRLAESDNAVLVRNMAEELVRT 1223
                  59999*.9***************887777888888888899*************9999999999754 PP

>> YL1  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.7   7.0    0.0048        14      21      60 ..     617     655 ..     594     703 .. 0.74

  Alignments for each domain:
  == domain 1  score: 5.7 bits;  conditional E-value: 0.0048
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         YL1  21 edelellFaEeedDeefeseeeeeeeensDsdfdsdeede 60 
                  d +++ FaE+edDe+f++   ++   ++D + d ++ed 
  KHJ35464.1 617 VDQIQK-FAEDEDDEDFSDIFADDSLIVKDYESDRESEDG 655
                 567777.***********9888777666676666666543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1265 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       644  (0.0359195); expected 358.6 (0.02)
Passed bias filter:                      481  (0.026828); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.82u 0.30s 00:00:01.11 Elapsed: 00:00:00.45
# Mc/sec: 8365.15
//
Query:       KHJ35465.1  [L=585]
Description: putative abc1 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      5e-30  104.1   0.0      1e-29  103.1   0.0    1.5  1  ABC1      ABC1 family


Domain annotation for each model (and alignments):
>> ABC1  ABC1 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.1   0.0   5.6e-34     1e-29       2     118 ..     191     308 ..     190     309 .. 0.94

  Alignments for each domain:
  == domain 1  score: 103.1 bits;  conditional E-value: 5.6e-34
        ABC1   2 elgkkleeiFaefdeePiAaASiaqVhrAklk.sgeeVavKvqrpgvkkriksDlellkllakllkkflkelrldleelvdefskslleEldferEAkn 99 
                 ++g++++e F++f+++Pi+aAS+aqVh A+++ +   VavK+q+p +++  ++Dlel+k++++++kkf++ ++  +++l +e++ sl+ Eldf++E++n
  KHJ35465.1 191 DTGQDINEYFSDFSSKPIGAASLAQVHLATIReTALPVAVKIQHPALAEWAMLDLELIKFTFSTVKKFFPTYD--FDWLSKEIEYSLPLELDFTKESQN 287
                 5799****************************6788*************************************..************************ PP

        ABC1 100 aekfrenfaklke..vkvPkv 118
                 a +++e f+k+++  + +P v
  KHJ35465.1 288 AIRCKEYFSKFPNipLVIPDV 308
                 ************744667766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (585 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      442  (0.0246528); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.26s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 4035.40
//
Query:       KHJ35466.1  [L=370]
Description: putative mitochondrial nicotinamide adenine dinucleotide transporter 1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    2.9e-61  203.4   6.6    1.1e-22   79.8   0.2    3.3  3  Mito_carr  Mitochondrial carrier protein
  ------ inclusion threshold ------
      0.084   12.6   3.1       0.12   12.2   0.1    2.4  4  TrbL       TrbL/VirB6 plasmid conjugal transfer protein


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.2   1.2e-26   1.1e-22       8      95 ..      31     126 ..      29     128 .. 0.93
   2 !   68.3   0.1   4.6e-23   4.1e-19       4      93 ..     131     226 ..     129     228 .. 0.93
   3 !   57.5   0.3   1.1e-19   9.9e-16       7      93 ..     245     355 ..     240     359 .. 0.92

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 1.2e-26
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS........HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   8 ellaGglagavatlvttPldvvKtrlqtqkksskksksaa........ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 + +aG+lag +++lvt+Pldv+Kt+lq+q++   +++ ++        ++ + + i++++G++g+yrGl+p +l++ p++a++f++y   k+l+ +
  KHJ35466.1  31 NAIAGSLAGFMSGLVTCPLDVIKTKLQAQGGFRLQNNGRNpsnivyqgMIGTARVIWQQDGIKGMYRGLGPIILGYLPTWAVWFTVYGRSKQLIAR 126
                 579*************************99998777666678999999*******************************************99876 PP

  == domain 2  score: 68.3 bits;  conditional E-value: 4.6e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS.......HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr   4 svlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa.......ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 + + ++ ++ +aga++++vt+P++v+Ktrl++q +++++ ++a+       ++d+ kk+yk+eG++++y+Gl+p+ll+ +   a++  +ye+lk  +
  KHJ35466.1 131 KNFVNFWSSIVAGACSSMVTNPIWVIKTRLMSQVSHKASGGNARppwyyksTIDAAKKMYKTEGFLSFYSGLIPALLGLT-HVAIQIPAYEFLKIRF 226
                 5688999***************************99998877779*********************************99.9**********99665 PP

  == domain 3  score: 57.5 bits;  conditional E-value: 1.1e-19
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS........................HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHH CS
   Mito_carr   7 kellaGglagavatlvttPldvvKtrlqtqkksskksksaa........................ildvlkkiykeeGlrglyrGllpnllrvapasal 81 
                   + a+ l++++a+++t+P +v++trlqtq++s + +k ++                        ++++++ i++eeG r++y G++ +++r +pa+  
  KHJ35466.1 245 GVISASFLSKVLASVATYPHEVLRTRLQTQQRSFTPTKLEYlafkhglekskrislypeyqqssgTVSMFRAILREEGWRAFYAGMGTSMMRAVPAATT 343
                 56678999*********************999999998888999999999999999999999************************************* PP

                 HHHHHHHHHHHH CS
   Mito_carr  82 kfvlyetlkrll 93 
                 ++ ++e+++  +
  KHJ35466.1 344 TLITFEYVISQF 355
                 ******998766 PP

>> TrbL  TrbL/VirB6 plasmid conjugal transfer protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0      0.34   3.1e+03      95     114 ..      29      48 ..      19      53 .. 0.73
   2 ?   -0.3   0.1     0.082   7.3e+02      58     106 ..      55     106 ..      29     108 .. 0.53
   3 ?   12.2   0.1   1.3e-05      0.12       6     115 ..     109     218 ..     107     222 .. 0.86
   4 ?   -3.2   0.1      0.64   5.7e+03      84     111 ..     315     342 ..     305     357 .. 0.52

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.34
        TrbL  95 ffsniggilagllawlgvll 114
                 +f++i+g lag++  l+++ 
  KHJ35466.1  29 TFNAIAGSLAGFMSGLVTCP 48 
                 57888899999988888876 PP

  == domain 2  score: -0.3 bits;  conditional E-value: 0.082
        TrbL  58 aaggallssagsstsp...tldqlgldvadklleqasslsffsniggilagl 106
                 ++ ++ +   + ++ +    + q ++ +a+ +++q++   +++++g+i++g+
  KHJ35466.1  55 KLQAQGGFRLQNNGRNpsnIVYQGMIGTARVIWQQDGIKGMYRGLGPIILGY 106
                 3333332222222222243555557888888899888888888888888775 PP

  == domain 3  score: 12.2 bits;  conditional E-value: 1.3e-05
        TrbL   6 ilygyaialgaieepiaelvkrllklgliaal.atnwggyativvdsfag.lpeaaggallssagsstsptldqlgldvadklleqasslsffsniggi 102
                 +++ +++++g++++ ia+ v    ++ ++ ++ a+  +   t+ + ++   l+++++   +++++  +   + +  +d+a+k++++ ++lsf+s++ ++
  KHJ35466.1 109 TWAVWFTVYGRSKQLIARYVESKNFVNFWSSIvAGACSSMVTNPIWVIKTrLMSQVSHKASGGNARPP--WYYKSTIDAAKKMYKTEGFLSFYSGLIPA 205
                 79999999************999999999999444458888887777777799***999999987655..999999*********************** PP

        TrbL 103 lagllawlgvlll 115
                 l+gl  +++ + +
  KHJ35466.1 206 LLGLTHVAIQIPA 218
                 **99888777765 PP

  == domain 4  score: -3.2 bits;  conditional E-value: 0.64
        TrbL  84 dklleqasslsffsniggilagllawlg 111
                 +++l + ++ +f+ ++g+ ++  + ++ 
  KHJ35466.1 315 RAILREEGWRAFYAGMGTSMMRAVPAAT 342
                 5555555555544444444444333332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (370 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       408  (0.0227564); expected 358.6 (0.02)
Passed bias filter:                      350  (0.0195214); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.41
# Mc/sec: 2729.66
//
Query:       KHJ35467.1  [L=124]
Description: putative ubiquinol-cytochrome c reductase complex 14 kda protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.3e-44  148.0   0.1    7.3e-44  147.8   0.1    1.0  1  UCR_14kD  Ubiquinol-cytochrome C reductase complex 14kD subun


Domain annotation for each model (and alignments):
>> UCR_14kD  Ubiquinol-cytochrome C reductase complex 14kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  147.8   0.1   4.1e-48   7.3e-44       1     100 []      14     113 ..      14     113 .. 0.99

  Alignments for each domain:
  == domain 1  score: 147.8 bits;  conditional E-value: 4.1e-48
    UCR_14kD   1 pllskllkplakwyanaagyrklGLrydDllseenedvqeALrrLpeeeaydRvfRlkrAlqlslkhklLPkeewtkpeedvrYlkpyieevekeaaer 99 
                 p+l ++++p++kwy+naagyrklGL++dDl++ee++ v +AL+rLp++eaydR+fR++rA+q+s++h+lLP+ee+tkpeedv+Yl p+i+e+e+ea+er
  KHJ35467.1  14 PWLYRVFEPISKWYTNAAGYRKLGLKADDLIPEESDIVLQALKRLPPKEAYDRIFRIRRAVQCSVSHQLLPREEQTKPEEDVEYLGPIIREIEAEAKER 112
                 6999**********************************************************************************************9 PP

    UCR_14kD 100 e 100
                 +
  KHJ35467.1 113 A 113
                 6 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (124 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      327  (0.0182386); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.38u 0.26s 00:00:00.64 Elapsed: 00:00:00.41
# Mc/sec: 916.81
//
Query:       KHJ35468.1  [L=150]
Description: putative transcription initiation factor tfiid subunit 13 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-17   63.0   0.1      3e-17   62.4   0.1    1.2  1  TFIID-18kDa    Transcription initiation factor IID, 18kD subu
     0.0022   18.3   0.0     0.0047   17.2   0.0    1.5  1  CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) a
  ------ inclusion threshold ------
      0.028   14.8   0.7      0.042   14.2   0.1    1.5  2  Histone        Core histone H2A/H2B/H3/H4
      0.055   13.5   0.0        0.2   11.7   0.0    1.8  2  Bromo_TP       Bromodomain associated
       0.15   12.5   0.0        0.3   11.5   0.0    1.5  1  CENP-S         CENP-S protein


Domain annotation for each model (and alignments):
>> TFIID-18kDa  Transcription initiation factor IID, 18kD subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.4   0.1   8.4e-21     3e-17       5      92 ..      19     106 ..      15     107 .. 0.95

  Alignments for each domain:
  == domain 1  score: 62.4 bits;  conditional E-value: 8.4e-21
                  CCCHHHHHCTTS-SS--HHHHHHHHHHHHHHHHHHHHHHHC-XXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
  TFIID-18kDa   5 kelqsmlyalGdvkePlqetvqlledlvrgyliellqqaakvaklrgsrkitlEDllfliRkDkkKlnRlkellslkellkkakKqfd 92 
                   elq++l+++Gd+++ l+    +l++l++++++el+ +a + a+ +g++ki+lED++f+ Rk ++ l+++ke    k ++  a+K +d
   KHJ35468.1  19 LELQQFLFGYGDDPQSLEPVKRILDELLTDFITELCFEAHRSAQVSGRQKIKLEDIKFACRKNPIYLGKIKEVQDKKAEIDAARKLLD 106
                  59**********************************************************************9999999999998776 PP

>> CBFD_NFYB_HMF  Histone-like transcription factor (CBF/NF-Y) and archaeal histone
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.2   0.0   1.3e-06    0.0047      25      64 ..      38      77 ..      34      78 .. 0.94

  Alignments for each domain:
  == domain 1  score: 17.2 bits;  conditional E-value: 1.3e-06
                   HHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCE-HHHHHHH CS
  CBFD_NFYB_HMF 25 AkeliaecveefieelaseAaeickkekrKtikaehiklA 64
                   +k ++ e ++ fi+el+ eA + ++ ++r  ik e+ik A
     KHJ35468.1 38 VKRILDELLTDFITELCFEAHRSAQVSGRQKIKLEDIKFA 77
                   6788999*******************************88 PP

>> Histone  Core histone H2A/H2B/H3/H4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.2   0.1   1.2e-05     0.042      91     130 ..      41      80 ..      38      81 .. 0.96
   2 ?   -2.7   0.1         2   7.1e+03      14      24 ..      98     108 ..      88     122 .. 0.46

  Alignments for each domain:
  == domain 1  score: 14.2 bits;  conditional E-value: 1.2e-05
                 HHHHHHHHHHHHHHHHHHHHHHHTTXSEEXHHHHHHHHHH CS
     Histone  91 alqealEallvelfeeAnllakhaKRvTitpkDiqlArrl 130
                 +l+e+l ++++el  eA + a  + R+ i  +Di++A r+
  KHJ35468.1  41 ILDELLTDFITELCFEAHRSAQVSGRQKIKLEDIKFACRK 80 
                 799**********************************996 PP

  == domain 2  score: -2.7 bits;  conditional E-value: 2
                 EEXXXXXXXXX CS
     Histone  14 ktapekkvsak 24 
                 ++a +k + ++
  KHJ35468.1  98 IDAARKLLDQN 108
                 33333333333 PP

>> Bromo_TP  Bromodomain associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0       0.8   2.9e+03      55      66 ..      10      21 ..       9      24 .. 0.83
   2 ?   11.7   0.0   5.6e-05       0.2      32      67 ..      42      77 ..      35      80 .. 0.93

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.8
                S-SS--HHHHHH CS
    Bromo_TP 55 gRseptlkDvvl 66
                +R +++++D++l
  KHJ35468.1 10 NRGQQNFSDLEL 21
                79999****984 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 5.6e-05
                HHHHHHHHHHHHHHHHHHHHTTSS-SS--HHHHHHH CS
    Bromo_TP 32 LteiaqkYirelgeqaksfaehagRseptlkDvvlt 67
                L e+++++i+el  +a++ a + gR + +l+D+ ++
  KHJ35468.1 42 LDELLTDFITELCFEAHRSAQVSGRQKIKLEDIKFA 77
                789999**************************9865 PP

>> CENP-S  CENP-S protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.5   0.0   8.4e-05       0.3      35      74 ..      43      82 ..      36      84 .. 0.81

  Alignments for each domain:
  == domain 1  score: 11.5 bits;  conditional E-value: 8.4e-05
      CENP-S 35 telvykqlenlakDLeaFakHAkRstittdDvlLlaRrne 74
                 el  + + +l+      a+  +R++i+ +D++  +R+n+
  KHJ35468.1 43 DELLTDFITELCFEAHRSAQVSGRQKIKLEDIKFACRKNP 82
                5666666667777777778889*****************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (150 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       696  (0.0388198); expected 358.6 (0.02)
Passed bias filter:                      494  (0.0275531); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.40u 0.24s 00:00:00.64 Elapsed: 00:00:00.39
# Mc/sec: 1160.54
//
Query:       KHJ35469.1  [L=357]
Description: putative co-chaperone for hsp40p [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-28   97.6   0.1    4.3e-28   97.6   0.1    1.8  2  DUF1977   Domain of unknown function (DUF1977)
    3.4e-20   71.9   0.3    9.2e-20   70.5   0.1    1.9  2  DnaJ      DnaJ domain


Domain annotation for each model (and alignments):
>> DUF1977  Domain of unknown function (DUF1977)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.2      0.57   5.2e+03      75     100 ..      20      45 ..      11      46 .. 0.53
   2 !   97.6   0.1   4.8e-32   4.3e-28       4     105 .]     248     350 ..     242     350 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.57
     DUF1977  75 ieraqgwfgtdeeklekaekmklpsC 100
                  +++qg   +++   +kae ++++ C
  KHJ35469.1  20 RNHNQGNQERKYTTEQKAEVIRVRRC 45 
                 44444444455555555655555555 PP

  == domain 2  score: 97.6 bits;  conditional E-value: 4.8e-32
     DUF1977   4 ksdPsysf.eksskytverttsnlkvpYyVnpaevskysskklrklekeveeeyvqnlraeCerekeqkerlieraqgwfgtdeeklekaekmklpsCe 101
                 ++ Ps++f ++ + +t++r+ts+l+v+Yy+np++v++y++++++ l+k++e +y+++l+ +C++e+  k++li++a gwf+td+ekl+ka  m++ +C 
  KHJ35469.1 248 ETGPSMRFdNAIPPHTLHRHTSRLNVDYYINPKDVDSYTNSQWKTLDKKAEINYINRLNLDCQQEELIKKELINQAYGWFFTDQEKLNKAYTMPMIACS 346
                 679*****988889************************************************************************************* PP

     DUF1977 102 eLke 105
                 +L++
  KHJ35469.1 347 KLEK 350
                 **85 PP

>> DnaJ  DnaJ domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.5   0.1     1e-23   9.2e-20       2      63 .]      50     113 ..      49     113 .. 0.94
   2 ?   -1.9   0.0      0.43   3.9e+03      45      50 ..     319     324 ..     306     339 .. 0.57

  Alignments for each domain:
  == domain 1  score: 70.5 bits;  conditional E-value: 1e-23
                 HHHHHTSSTT...G-HHHHHHHHHHHHHHHSTTTSCCHHHHHHHHHHHHHHHHHHTSHHHHHHHH CS
        DnaJ   2 yYeiLgvskd...asedeIkkaYrklalkyHPDknpkdpeaeekFkeineAyevLsdpekRkqYD 63 
                 +Y+iLg++k+    ++ eIkkaYr+++l  HPDkn +++ a+e+Fk +++A+ vL d++kR++YD
  KHJ35469.1  50 FYDILGLEKSrttVTDTEIKKAYRRISLLTHPDKN-GHEHADEAFKMVSRAFGVLGDKDKRAKYD 113
                 8********954446999*****************.9***************************9 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 0.43
                 HHHHHH CS
        DnaJ  45 eineAy 50 
                  in+Ay
  KHJ35469.1 319 LINQAY 324
                 344444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (357 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       546  (0.0304535); expected 358.6 (0.02)
Passed bias filter:                      394  (0.0219756); expected 358.6 (0.02)
Passed Vit filter:                        41  (0.0022868); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.47u 0.17s 00:00:00.64 Elapsed: 00:00:00.36
# Mc/sec: 2981.41
//
Query:       KHJ35470.1  [L=222]
Description: putative erp1 protein precursor [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.1e-47  159.3   0.1    1.1e-46  159.1   0.1    1.0  1  EMP24_GP25L  emp24/gp25L/p24 family/GOLD


Domain annotation for each model (and alignments):
>> EMP24_GP25L  emp24/gp25L/p24 family/GOLD
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.1   0.1   5.9e-51   1.1e-46       1     181 [.      19     216 ..      19     217 .. 0.96

  Alignments for each domain:
  == domain 1  score: 159.1 bits;  conditional E-value: 5.9e-51
  EMP24_GP25L   1 altfklpageekCfyeelkkgtlltgsyqvtdgg.........aaldvdlsvkdpdgngerlvkkkdresegdfsftakesgeykvCfdnsfstkss. 88 
                  +l+f ++ +++kCfyeel+kgtl++g+y +++ +         ++l+  +++ + ++ ++r+v++k+++s+ +f+f+a+++ge+++Cf+ s+s+ +s 
   KHJ35470.1  19 SLHFFIDGNQPKCFYEELTKGTLVVGHYVAEEFDsnsktwskhDGLTNFITIDEIFNHDHRVVSQKGSSSG-RFTFSAADNGEHRICFTLSSSSGNSg 115
                  589****************************8888899999988899999999************999887.*********************9999* PP

  EMP24_GP25L  89 ..........kkvsfdievgseasdykdsakkekletleselkkleekldsikreqkylrereerlrdtnestnsrvvwwsilqllvlvlvavlqvyy 176
                            +k+s+d+ +g+++    ++a+k k+  + +++k l+ +l +i+req+ +rere+++rd++e tn rvv+w+++q ++l l++ +q+ +
   KHJ35470.1 116 wlstsnhqggIKLSLDLAIGQQS--TIEAATKGKILHIVQRVKDLNGRLGDIRREQIWQREREAEFRDQSETTNGRVVRWTLVQFVILGLTCTWQLSH 211
                  *******************9764..679999******************************************************************* PP

  EMP24_GP25L 177 LkrfF 181
                  L++fF
   KHJ35470.1 212 LRSFF 216
                  ***** PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       424  (0.0236488); expected 358.6 (0.02)
Passed bias filter:                      349  (0.0194657); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.42u 0.25s 00:00:00.67 Elapsed: 00:00:00.41
# Mc/sec: 1635.08
//
Query:       KHJ35471.1  [L=114]
Description: hypothetical protein EV44_g0223 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    0.00014   20.9   0.0    0.00015   20.7   0.0    1.0  1  Arabinose_trans  Mycobacterial cell wall arabinan synthesis p
  ------ inclusion threshold ------
      0.076   12.8   0.1        0.1   12.4   0.1    1.5  1  TMEM132D_C       Mature oligodendrocyte transmembrane protein


Domain annotation for each model (and alignments):
>> Arabinose_trans  Mycobacterial cell wall arabinan synthesis protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   1.7e-08   0.00015     247     308 ..      11      74 ..       4      97 .. 0.85

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.7e-08
  Arabinose_trans 247 allapllAagtlvllvvfadqt.laavleatrvrsavGpslewyeell.RYeaLleetadGsla 308
                      +  apl+A  ++ +l v+++ + laa ++a++ r a G +l+w++e   R+ +L ++ +dG+l 
       KHJ35471.1  11 TITAPLAAFCMAAILFVYSRTSiLAAKRNAQKHRDADGGQLNWHNESQrRHGKLESPVQDGTLG 74 
                      6789****99988888887776367889999***************8725889999999**986 PP

>> TMEM132D_C  Mature oligodendrocyte transmembrane protein, TMEM132D, C-term
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   1.2e-05       0.1      39      70 ..      16      47 ..      12     103 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 1.2e-05
  TMEM132D_C 39 lgvfClAilvflincvvyalkfrrkkvpvegq 70
                l++fC+A + f+ + ++  +  r+++    ++
  KHJ35471.1 16 LAAFCMAAILFVYSRTSILAAKRNAQKHRDAD 47
                89**************9999999966555543 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (114 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       604  (0.0336884); expected 358.6 (0.02)
Passed bias filter:                      413  (0.0230353); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.37u 0.25s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 896.40
//
Query:       KHJ35472.1  [L=1013]
Description: putative mitochondrial presequence protease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.8e-80  269.7   0.6    2.6e-80  269.2   0.6    1.3  1  M16C_assoc       Peptidase M16C associated
    1.7e-25   90.1   0.0    2.5e-18   66.7   0.0    2.8  2  Peptidase_M16_C  Peptidase M16 inactive domain
    1.1e-08   35.2   0.0    2.1e-06   27.8   0.0    2.4  2  Peptidase_M16    Insulinase (Peptidase family M16)


Domain annotation for each model (and alignments):
>> M16C_assoc  Peptidase M16C associated
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  269.2   0.6   4.4e-84   2.6e-80       1     251 []     487     745 ..     487     745 .. 0.98

  Alignments for each domain:
  == domain 1  score: 269.2 bits;  conditional E-value: 4.4e-84
  M16C_assoc   1 lkPdeeleeekekeekerLaakkasls......eeekekiveetkeLkerQekpdsedlscLPtLkleDIpreiteleeekeveidgvkvllhevpTNg 93 
                 ++P++++++++++ee+erLa+k+a++s      ee +  i++ ++eL ++Q+k+++edlscLP++++ DIpr+++ +e ++ ++i++++++++++pTNg
  KHJ35472.1 487 MTPSKSYSKNLAQEEAERLARKIAEISdiaggdEEGRSCIINMEQELLHEQAKTNTEDLSCLPSVSVRDIPRTKVSVELSE-TRIKKINIQWRQAPTNG 584
                 9*******************************9*********************99******************8888777.669************** PP

  M16C_assoc  94 ivYfrllfdlsdlpeellpylpLftdvltelgtkkkdyeeleqeiklktGGisasvsvssspedldkyeegfvlsgkaLdrnvekmfeLlreilletkf 192
                 ++Yfr+++ l++lp el+ ++pLftd++ ++gt ++++e+le++iklktGG+s++++ s+sp dl+  +eg+++sg aLd+nv++m+eLlr+++ et+f
  KHJ35472.1 585 LTYFRAVNILDNLPAELRCLIPLFTDSIFRIGTREMSMEQLEDLIKLKTGGLSINYFNSPSPFDLNASTEGLSFSGTALDKNVSEMYELLRKLIVETNF 683
                 *************************************************************************************************** PP

  M16C_assoc 193 dd...kerlkelvkesksrlensiassGhsyAmsraasslspaaalseqlsGlsqlkflkeL 251
                 d+   ++++k+l+++s +++ n+ias+GhsyA+s+a+++++++ + +eq+sGl+q+k++++L
  KHJ35472.1 684 DSheaENQIKQLLQASSDGAVNTIASRGHSYAKSAAEKYFTEYFWNKEQVSGLTQMKLITSL 745
                 **9999*****************************************************997 PP

>> Peptidase_M16_C  Peptidase M16 inactive domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7   0.0   4.2e-22   2.5e-18       2     181 ..     231     415 ..     230     417 .. 0.85
   2 !   20.3   0.0   7.4e-08   0.00044      82     180 ..     832     922 ..     706     924 .. 0.78

  Alignments for each domain:
  == domain 1  score: 66.7 bits;  conditional E-value: 4.2e-22
                      H-HHHHHHHHHHHSSGGGEEEEEEESS-HHHHHHHHH.....HHHTTSTHHSHCSGSCTSSSSSGGGSSEEEEEEEESSS.SSEEEEEEEEEEC CS
  Peptidase_M16_C   2 ltredlkefykkfYrpenmvlaivGdvdheelvklie.....kyfgdlkaskappakptgepltpatlkkppvvlkklde.eqahlslafegps 89 
                      lt ++l +f+  +Y+p+n +++ +Gd +     +lie      +f ++k     ++kp++ ++ p  ++ + ++ + +++  q++ s+ +++++
       KHJ35472.1 231 LTHQQLLKFHADHYHPSNTKIFTYGDMPLM--DHLIEinsrlSFFEQVKPQL-DDRKPIDLSKGPRNFSVKGPIDPLMPQeMQNKTSISWLMCP 321
                      899**************************5..44444446777777777553.67788888888888888888888887778************ PP

                      TCTHTTHHHHHHHHHHHHSSTTSHHHHHHHTTTTSESEEEEE..EEEESSCEEEEEEEEEECT.THHHHHHHHHHHHHHHHHHTS-HHHHHHHH CS
  Peptidase_M16_C  90 kendeddlalavlntlLgggmesrLytnlrekeglaysvsaf..ndsyrdsglfgisatadpe.nveevvevilkelrklkkeglteeelerak 180
                      ++n  + + l++l+ lL++g  s+ y+ l  + gl++  s    +d      +f+i++t+ ++ n+++v e+i+k+l++++++g+ ++ ++ + 
       KHJ35472.1 322 TTNIIETFSLEILSALLMDGYGSPMYRSLI-EAGLGTEWSPNtgFDTSGKIAIFSIGLTGVTNkNLLDVKEAIFKTLKQVHQKGFEDSKVQGIL 414
                      ******************************.****886665532665569**********9999***********************9998765 PP

                      H CS
  Peptidase_M16_C 181 n 181
                      +
       KHJ35472.1 415 H 415
                      5 PP

  == domain 2  score: 20.3 bits;  conditional E-value: 7.4e-08
                      EEEEEEECTCTHTTHHHHHHHHHHHHSSTTSHHHHHHHTTTTSESEEEEEEEEESSCEEEEEEEEEECTTHHHHHHHHHHHHHHHHHHTS-HHH CS
  Peptidase_M16_C  82 slafegpskendeddlalavlntlLgggmesrLytnlrekeglaysvsafndsyrdsglfgisatadpenveevvevilkelrklkkeglteee 175
                      +l f++ ++   + +++l++l++lL +     L +++r ++g ay+ +a++   + +g+f ++ + dp+   + +  ++++ +   +  +t+++
       KHJ35472.1 832 ALSFPTAPY-ISPASAPLQILSQLLTHK---YLHHEIR-EKGGAYGGGASSQ--SLCGVFNFYSYRDPN-PMNSISIFKSAGNVALERNWTDRD 917
                      677888888.9999**************...*******.9999*******77..777**********88.666666666666666666677777 PP

                      HHHHH CS
  Peptidase_M16_C 176 lerak 180
                      le ak
       KHJ35472.1 918 LEDAK 922
                      77776 PP

>> Peptidase_M16  Insulinase (Peptidase family M16)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.8   0.0   3.5e-10   2.1e-06      21     105 ..      71     158 ..      68     165 .. 0.91
   2 !    4.7   0.0    0.0046        28      67     114 ..     650     697 ..     613     721 .. 0.83

  Alignments for each domain:
  == domain 1  score: 27.8 bits;  conditional E-value: 3.5e-10
                    -SGGGSCTTTTTHHHHHHHHTTSBBSSSCH.HHHHHHHHHTTCEE.EEEEESSEEEEEEEEEGGG.HHHHHHHHHHHHHSBTTSHHHH CS
  Peptidase_M16  21 aGSryepkdlnGlAHllehmafkgTkkyps.nklaeeleklGgsl.nAttsrentvYyvevlskd.lekaldvladvfkaplleesev 105
                    +G    p+d  G+ H+leh  + g+kkyp  + + ++l +   ++ nA t   +t Y + +++++ +++++ v  d + +pll++s++
     KHJ35472.1  71 VGFKTNPPDDTGVPHILEHTTLCGSKKYPIrDPFFKMLPRTLSNFmNAMTASNYTYYPFATTNQQdFKNLMSVYLDATLHPLLKSSDF 158
                    5666789999********************9*******99999989***********998888777******************9987 PP

  == domain 2  score: 4.7 bits;  conditional E-value: 0.0046
                    EEESSEEEEEEEEEGGGHHHHHHHHHHHHHSBTTSHHHHHHHHHHHHH CS
  Peptidase_M16  67 ttsrentvYyvevlskdlekaldvladvfkaplleesevererkvvek 114
                    + s+e  ++  ++l+k++ ++ ++l   + ++ ++++e e + k++++
     KHJ35472.1 650 NASTEGLSFSGTALDKNVSEMYELLRKLIVETNFDSHEAENQIKQLLQ 697
                    456678899999*****************************7665554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1013 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       612  (0.0341346); expected 358.6 (0.02)
Passed bias filter:                      523  (0.0291706); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.72u 0.26s 00:00:00.98 Elapsed: 00:00:00.40
# Mc/sec: 7539.52
//
Query:       KHJ35473.1  [L=131]
Description: hypothetical protein EV44_g2564 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (131 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       737  (0.0411066); expected 358.6 (0.02)
Passed bias filter:                      565  (0.0315132); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.36u 0.22s 00:00:00.57 Elapsed: 00:00:00.34
# Mc/sec: 1163.29
//
Query:       KHJ35474.1  [L=479]
Description: putative muscle-derived protein (neurite-outgrowth-promoting) protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-90  303.0  58.3    3.3e-90  302.4  58.3    1.2  1  Taxilin       Myosin-like coiled-coil protein
  ------ inclusion threshold ------
      0.031   14.7   0.1       0.15   12.5   0.0    2.2  2  HMA           Heavy-metal-associated domain
        0.4   10.9  50.7       0.24   11.7  10.2    4.6  4  TMF_TATA_bd   TATA element modulatory factor 1 TATA binding
          5    7.1  27.5        1.7    8.5   0.8    4.7  4  GIT_CC        GIT coiled-coil Rho guanine nucleotide exchange
        8.9    6.7  28.7       0.52   10.7   1.6    4.8  5  TSC22         TSC-22/dip/bun family


Domain annotation for each model (and alignments):
>> Taxilin  Myosin-like coiled-coil protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  302.4  58.3   9.1e-94   3.3e-90       1     308 []      93     390 ..      93     390 .. 0.99

  Alignments for each domain:
  == domain 1  score: 302.4 bits;  conditional E-value: 9.1e-94
     Taxilin   1 keaeqlkeslsklespeekleaLvkkyaelleerkrlqkqlkklkkkleqlqkekeqlqaelskaalaksKLekLcRelqkqnkklkeeskqrareeee 99 
                 k++++l+++++k++   +k+e+++++y+ell+++krl+++++k+kk+++ lqke+++ +++lsk+++ k+KLekLcRelqk n++lk e+k++++ e++
  KHJ35474.1  93 KHTRELNNATAKMDP-LQKVETIHRRYTELLSQMKRLERENQKNKKRADMLQKERDHGRTDLSKTTTIKEKLEKLCRELQKDNNRLKAENKTLQDAEKD 190
                 6899*********98.*********************************************************************************** PP

     Taxilin 100 krkelaekfqakLkdiqaqieekserneklreenae..lteKlkslieqyelreehfekllktkelelqlaeaKlqqadallkeeqekkkrekeyllke 196
                 ++ +++ kf++ L++++   ++k++++ ++++ + +  +++++kslieqyelre+hf++ll+tkele+q+++ ++         ++ekk++e+e+  ++
  KHJ35474.1 191 NHLAWDIKFKQVLWQLEGIEDAKENPQAQVVQVEVDelFRQRFKSLIEQYELRELHFHSLLRTKELEVQVSMGRY---------DREKKQAEAEV--AR 278
                 *****************************999999999*************************************.........***********..** PP

     Taxilin 197 akeltkkvkalketekelkeqlnlYaeKfeefqdtLakSnelFatFkkEmekmtkktkklEketnlwkskfektnkallemaeertekkkeieklkkki 295
                 +++l+ +v ++++te+el++qln+Y+eKf++++dtL++Sn+lF tF+kEme+m+kktk+lEke++++++k++ tn+++l+maeert++++e+ +l+kk+
  KHJ35474.1 279 SRALNSQVLTFSKTESELRNQLNIYVEKFKQVEDTLNNSNDLFLTFRKEMEEMSKKTKRLEKENTNLTRKHDLTNQNILKMAEERTKTNEELRALQKKN 377
                 *************************************************************************************************** PP

     Taxilin 296 qkLeklcraLqee 308
                 +kL ++++++q +
  KHJ35474.1 378 EKLTSIINQMQRQ 390
                 ***********87 PP

>> HMA  Heavy-metal-associated domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.1       3.2   1.1e+04      50      58 ..     157     165 ..     151     167 .. 0.65
   2 ?   12.5   0.0   4.1e-05      0.15      15      45 ..     198     228 ..     197     241 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 3.2
         HMA  50 rkiieaiek 58 
                  +i+e++ek
  KHJ35474.1 157 TTIKEKLEK 165
                 468888887 PP

  == domain 2  score: 12.5 bits;  conditional E-value: 4.1e-05
         HMA  15 kvekvLselpgVesvkvdlatktvtVegdae 45 
                 k ++vL+ l+g+e++k +  ++ v+Ve+d+ 
  KHJ35474.1 198 KFKQVLWQLEGIEDAKENPQAQVVQVEVDEL 228
                 6799************************985 PP

>> TMF_TATA_bd  TATA element modulatory factor 1 TATA binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.1   2.1     0.061   2.2e+02      18      64 ..      67     113 ..      60     121 .. 0.83
   2 ?   11.7  10.2   6.6e-05      0.24      16      80 ..     120     184 ..     114     190 .. 0.89
   3 ?    7.1   6.2    0.0017       6.2      17      90 ..     247     317 ..     245     331 .. 0.81
   4 ?    5.1  11.9     0.007        25      14      78 ..     328     389 ..     315     396 .. 0.57

  Alignments for each domain:
  == domain 1  score: 2.1 bits;  conditional E-value: 0.061
  TMF_TATA_bd  18 sseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkk 64 
                   ++i +lE + a  ke+ +++e+e ++ ++e+ + +++++ l++ ++
   KHJ35474.1  67 AAKISQLELDAAGDKEQEAEIEREVKKHTRELNNATAKMDPLQKVET 113
                  67899999999999999999999999999999999999988877655 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 6.6e-05
  TMF_TATA_bd  16 rlsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqery 80 
                  +l s+ +rlE E ++ k++   l++erd  r ++ k ++  e+l++l +el++ +++l++ ++ +
   KHJ35474.1 120 ELLSQMKRLERENQKNKKRADMLQKERDHGRTDLSKTTTIKEKLEKLCRELQKDNNRLKAENKTL 184
                  6889*****************************************99999999888887766655 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.0017
  TMF_TATA_bd  17 lsseirrlEgElaslkeelerleaerdeareeivklmkeneelkelkkeleelekeleelqeryetlLellGek 90 
                  + s +r +E E++ ++    r  +e+++a++e+++  + n ++ + +k+ +el+++l+   e+ +++   l   
   KHJ35474.1 247 FHSLLRTKELEVQVSM---GRYDREKKQAEAEVARSRALNSQVLTFSKTESELRNQLNIYVEKFKQVEDTLNNS 317
                  5789999999987765...566789******************************9998888888776666555 PP

  == domain 4  score: 5.1 bits;  conditional E-value: 0.007
  TMF_TATA_bd  14 verlsseirrlEgElaslkeelerleaerdeareeivklm....keneelkelkkeleelekeleelqe 78 
                  +e++s++ +rlE E ++l        ++ d +++ i+k+     k+neel++l+k++e+l++ ++++q+
   KHJ35474.1 328 MEEMSKKTKRLEKENTNLT-------RKHDLTNQNILKMAeertKTNEELRALQKKNEKLTSIINQMQR 389
                  4555555555555555544.......4444444444444322225567777777777777777777765 PP

>> GIT_CC  GIT coiled-coil Rho guanine nucleotide exchange factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   2.1    0.0078        28      23      64 ..      96     136 ..      89     138 .. 0.83
   2 ?    8.5   0.8   0.00049       1.7      39      65 ..     160     186 ..     153     187 .. 0.86
   3 ?    4.6   1.3    0.0083        30      43      65 ..     325     347 ..     290     348 .. 0.87
   4 ?    4.6   2.2    0.0083        30      26      51 ..     364     389 ..     350     391 .. 0.60

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.0078
      GIT_CC  23 kalaaseakiqqLlkvNtslsdelrlLQskvqkLqaeNaqlr 64 
                 ++l ++ ak+  L+kv t + +  ++L s++++L+ eN++ +
  KHJ35474.1  96 RELNNATAKMDPLQKVET-IHRRYTELLSQMKRLERENQKNK 136
                 3689999*********86.899999999**********9865 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.00049
      GIT_CC  39 NtslsdelrlLQskvqkLqaeNaqlrd 65 
                 +++l++  r+LQ+  ++L+aeN++l+d
  KHJ35474.1 160 KEKLEKLCRELQKDNNRLKAENKTLQD 186
                 567788889**************9976 PP

  == domain 3  score: 4.6 bits;  conditional E-value: 0.0083
      GIT_CC  43 sdelrlLQskvqkLqaeNaqlrd 65 
                  +e++++ +k ++L++eN++l +
  KHJ35474.1 325 RKEMEEMSKKTKRLEKENTNLTR 347
                 57999**************9975 PP

  == domain 4  score: 4.6 bits;  conditional E-value: 0.0083
      GIT_CC  26 aaseakiqqLlkvNtslsdelrlLQs 51 
                 +  +  + +L+k N++l+  ++++Q+
  KHJ35474.1 364 TKTNEELRALQKKNEKLTSIINQMQR 389
                 44455556666666666666666665 PP

>> TSC22  TSC-22/dip/bun family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   1.6   0.00014      0.52      15      44 ..     110     139 ..     109     147 .. 0.86
   2 ?    8.6   0.9   0.00066       2.4      18      43 ..     162     187 ..     156     195 .. 0.73
   3 ?   -2.7   0.1       2.2   7.9e+03      15      31 ..     224     241 ..     221     253 .. 0.70
   4 ?    3.6   3.2     0.023        83      19      43 ..     324     348 ..     322     365 .. 0.72
   5 ?   -0.8   0.1      0.54   1.9e+03      14      46 ..     368     386 ..     364     392 .. 0.51

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00014
       TSC22  15 eVevLkekIkeLeernseleeENslLkala 44 
                  Ve+   + +eL++++++le+EN+  k+ a
  KHJ35474.1 110 KVETIHRRYTELLSQMKRLERENQKNKKRA 139
                 69*********************9877654 PP

  == domain 2  score: 8.6 bits;  conditional E-value: 0.00066
       TSC22  18 vLkekIkeLeernseleeENslLkal 43 
                  L +  +eL+++n++l+ EN++L+  
  KHJ35474.1 162 KLEKLCRELQKDNNRLKAENKTLQDA 187
                 45555679999999999999999765 PP

  == domain 3  score: -2.7 bits;  conditional E-value: 2.2
       TSC22  15 eVevL.kekIkeLeerns 31 
                 eV++L +++ k L+e+ +
  KHJ35474.1 224 EVDELfRQRFKSLIEQYE 241
                 777665778888887765 PP

  == domain 4  score: 3.6 bits;  conditional E-value: 0.023
       TSC22  19 LkekIkeLeernseleeENslLkal 43 
                  +++  e+ ++ ++le+EN+ L + 
  KHJ35474.1 324 FRKEMEEMSKKTKRLEKENTNLTRK 348
                 588999**************99543 PP

  == domain 5  score: -0.8 bits;  conditional E-value: 0.54
       TSC22  14 EeVevLkekIkeLeernseleeENslLkalasp 46 
                 Ee               ++l++ N+ L +++++
  KHJ35474.1 368 EEL--------------RALQKKNEKLTSIINQ 386
                 444..............4455555555444443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (479 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      3081  (0.171844); expected 358.6 (0.02)
Passed bias filter:                      535  (0.0298399); expected 358.6 (0.02)
Passed Vit filter:                       122  (0.00680462); expected 17.9 (0.001)
Passed Fwd filter:                        67  (0.00373696); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 1.22u 0.26s 00:00:01.48 Elapsed: 00:00:00.46
# Mc/sec: 3127.62
//
Query:       KHJ35475.1  [L=579]
Description: putative carboxylesterase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.6e-56  191.6   0.0    4.3e-56  190.8   0.0    1.3  1  COesterase     Carboxylesterase family
    3.6e-09   36.8   0.0      1e-08   35.3   0.0    1.8  1  Abhydrolase_3  alpha/beta hydrolase fold


Domain annotation for each model (and alignments):
>> COesterase  Carboxylesterase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.8   0.0   4.8e-60   4.3e-56       4     349 ..      31     429 ..      29     491 .. 0.79

  Alignments for each domain:
  == domain 1  score: 190.8 bits;  conditional E-value: 4.8e-60
                 EEEETTEEEEEEEEEESTCSEEEEEEEEESSB---GGGTTS--BE----SSEEECBS---BESEECSSSSSCGHHCHHH.................... CS
  COesterase   4 vvetslGkvrGkrvklksekevdaFlGiPYAepPvgelRFkkPepaepwtgvrdAtkfspaCpqnaeksekeekeleaw.................... 82 
                 +v+t+ G      +kl+ + ++++F Gi Y+      +RF++P+p  + ++  ++ k +pa   ++++ +      ++                     
  KHJ35475.1  31 IVTTEKGIHHESVLKLTHSVTYYSFFGIQYGRV---LERFSEPVPVCHNSHSKKCPKGNPAISRSNKHGKGY-PRCPQAvpawmdshigshhvkdpsri 125
                 566666665556667777779***********9...79*******888888888876665433333332221.11111134447777777777****** PP

                 ...BES---EEEEEEESSS.......SSTTSSEEEEEEE--STTTS-BGCG.S-THHHHHHH......TSEEEEE----HHHHH-B-SSTTSBS-HHHH CS
  COesterase  83 ...vsEDCLyLnvytPkek.......keakkklPVlVwihGggfqtgsase.ydgsaLaaeg......nvivVtinYRlGvlGFlstgdeeapGNvGll 164
                    + EDCL+L++++Pk+        ++     P lVwihGggf++gs+    d+++L+a+       + ++V+inYRlG++GFl+ + +e+  NvGll
  KHJ35475.1 126 sedQVEDCLFLDIFVPKKVwdrthdkPDLGF-APTLVWIHGGGFTSGSKGLhDDPDVLLARTlefheaGAVIVSINYRLGLFGFLHSE-KETVSNVGLL 222
                 ****************988999876333333.3****************9956788888888899999******************96.58899***** PP

                 HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSGGGTT................SBSEEEEES--TTSTTTSBSHHHHHHHHHHHHTTS-C CS
  COesterase 165 DqvlALrWVkenIasFGGdpervtlfGesAGaasvsllllsplsrg................lfkraIlqSGsalspwaiqkkarkrakklakkvgcka 247
                 Dq++AL W++++I++FGGd  rvt++Ge+AGa ++  +++ p   +                 f++aI+qS   ++p+  ++++  + k +ak+ + + 
  KHJ35475.1 223 DQRMALSWIQKHIQKFGGDQFRVTVIGEGAGAGAILHHITAPNMTKhlfhhykkpashyqlfPFRSAIIQSP-TFQPIIPSQSKYITEKVIAKASEISG 320
                 **************************************99976655599***********999********7.78888777777777788888888844 PP

                 SSHHHHHHHHHCS-HHHHHHCCGGSSSSSSTTC-SSS-B--S.....SSSSS-HHHHHHCGC...CSEEEEEEETTTTHHHHCCHSTTTSSSSHHHHHH CS
  COesterase 248 ssskelveclrsksaeelldaqekaleasssklvsfaPvvdg.....dflpekPeellkseg...kvplliGvnkdegllflaylldkeksvkkkeekl 338
                 ++  + v  lr+ s e+l++ ++  + +s    ++f+P+vd      +++p+ P++ lk  +   +v l +G+ k+eg+ ++  ++ +++  +    ++
  KHJ35475.1 321 QKI-TKVATLRKLSFETLYAVNKALVLESPYGTFTFGPTVDYqkgdlSYVPDFPLRRLKAGKvakDVTLFVGFRKEEGHSLCPSTAGTDQGFQVHLANI 418
                 444.67899***************99999************98888888***********77********************98888866655555555 PP

                 HHHHHHHHHHH CS
  COesterase 339 sesllkdelyl 349
                   ++l++e+ +
  KHJ35475.1 419 FPTILQREIQY 429
                 55554444433 PP

>> Abhydrolase_3  alpha/beta hydrolase fold
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   1.2e-12     1e-08       1      90 [.     160     263 ..     160     341 .. 0.73

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 1.2e-12
                    EEEE--STTTS--TTTT...HHHHHHHH..HHHTSEEEEEE---T......T..TS-TTHHHHHHHHHHHHHHHTHHHHTETTCEEEEEEETHHHH CS
  Abhydrolase_3   1 lvyfHGGGfvlgsldth...dalcrela..kelgavvvsvdYrlA......P..ehpfPaavedalaalrwlaeqawelgadpsrivlaGdSaGGn 83 
                    lv++HGGGf++gs   h   d l+++    +e+gav+vs++Yrl          e+     + d   al+w++++ +++g d+ r+++ G+ aG+ 
     KHJ35475.1 160 LVWIHGGGFTSGSKGLHddpDVLLARTLefHEAGAVIVSINYRLGlfgflhSekETVSNVGLLDQRMALSWIQKHIQKFGGDQFRVTVIGEGAGAG 255
                    69***************55544444443235899**********8444444233666788899************99**************99954 PP

                    .HHHHHHH CS
  Abhydrolase_3  84 .laaaval 90 
                     + ++++ 
     KHJ35475.1 256 aILHHITA 263
                    25555443 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (579 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       297  (0.0165653); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.40
# Mc/sec: 4322.77
//
Query:       KHJ35476.1  [L=74]
Description: hypothetical protein EV44_g3516 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (74 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       299  (0.0166769); expected 358.6 (0.02)
Passed bias filter:                      211  (0.0117686); expected 358.6 (0.02)
Passed Vit filter:                         5  (0.000278878); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.34u 0.24s 00:00:00.58 Elapsed: 00:00:00.38
# Mc/sec: 585.94
//
Query:       KHJ35477.1  [L=529]
Description: putative adenylyl cyclase-associated protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.7e-111  371.6   0.0     5e-111  371.2   0.0    1.2  1  CAP_N     Adenylate cyclase associated (CAP) N terminal
      5e-57  191.9   3.5    7.3e-57  191.4   3.5    1.2  1  CAP_C     Adenylate cyclase associated (CAP) C terminal


Domain annotation for each model (and alignments):
>> CAP_N  Adenylate cyclase associated (CAP) N terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  371.2   0.0  5.6e-115    5e-111       2     313 ..      15     337 ..      14     341 .. 0.86

  Alignments for each domain:
  == domain 1  score: 371.2 bits;  conditional E-value: 5.6e-115
                 XXXXXXXXXXXXXXXX..........XXXXXXXXXXXXX...XXXXXXXXXXSXH.HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH CS
       CAP_N   2 tlikRLEaatsrLEdiaisessssasskasssssaaaaa...aaaaakaaaaaaaaksveaFdelisgsvkefvelskkiggevaeqaelvkkafeaqr 97 
                 tl+kRLE at rLEd+a+s+ ++ ++s a+s ++ a+ +   ++a  +++++++ ++sve Fd++isg+v+ fv++s+++gg + eqa+++ kaf+ qr
  KHJ35477.1  15 TLVKRLEVATCRLEDLATSAIQQPNESGAESFTRLASLPvipENALDSTTVPEKLPESVEGFDAFISGPVQGFVKISEDLGGSILEQANSLLKAFHGQR 113
                 8***************9995444444444444443333300033333334444444******************************************* PP

                 HHHHHHHHBE---..HHHHHHHCHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHCGGGGGGGGG--S-HHHHHHHHHHHHHHHHHHHHHHHTTT-HHHHH CS
       CAP_N  98 kfllvaskakkPad.seelqelLkplseaiqkvqeireknrksklfnhLsavsegipalgWvavepkPapyvkemkdaaqFYtNrVlkeykekdkkhve 195
                 kf+++++kakkP+  s+ ++elLkpl+e+i++v+eir++nr+s++fn Ls+vse+i +l+W++vepkP ++++e+ ++aq+++NrVl e+k++d ++ve
  KHJ35477.1 114 KFIYITTKAKKPEMnSPVFMELLKPLQESITAVSEIRDSNRGSPVFNLLSVVSESIGFLAWITVEPKPQKHIEEFYGSAQYWGNRVLIEFKDTDSRKVE 212
                 ************559************************************************************************************ PP

                 HHHHHHHHHHHHHHHHHHHSTTS----TTSBE.............SSC--XXXX..XXX.....XXXXXXXX.....XXXXXXXXXXXXXXXXXXXXXX CS
       CAP_N 196 WvksflqilkeLqaYvkeyhttGltWnkkGkdaeealk......aaaaaasaaa..agg.pppPpPpPppasvfeeesaaasasaaaggmsavFaeLnk 285
                 W ++++q++++L++Yvk+++++G+ Wn++G ++ee++k      +  +++++++  ++  +ppPpP P+p +++ +e++++s+s+++gg++avF+eLnk
  KHJ35477.1 213 WLQQYYQVFNNLSEYVKQTFPHGILWNPQGLTLEEVIKafdqktS--PSSNKKTdfSQDfAPPPPPGPAPLPIVLDEASKNSPSEKSGGLGAVFSELNK 309
                 **************************************9986431..222222233445466666667788888888889******************* PP

                 XXXXXXXXXXXXXXXXXXXX..XXXXXX CS
       CAP_N 286 GeaiTkgLkkVdksqkThKnPslrasst 313
                 G++iTkgLkkV+++q+ThKnPslra+s+
  KHJ35477.1 310 GSDITKGLKKVNSDQMTHKNPSLRAGSS 337
                 *************************987 PP

>> CAP_C  Adenylate cyclase associated (CAP) C terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  191.4   3.5   8.2e-61   7.3e-57       2     157 .]     370     527 ..     369     527 .. 0.96

  Alignments for each domain:
  == domain 1  score: 191.4 bits;  conditional E-value: 8.2e-61
       CAP_C   2 ppklelegnkwlvenqennk.eieieetelkqsvyifkCknstiqikgKvnaitldnckkvsvvvdsvvSsvevincksvkvqvlgkvptisiDktdgv 99 
                  +++++egnkw+ven+++++ +i+ie t+++qs++i++Ck++ti ++gK+nai++dn+ ++s+++ds+vSs+++i+++++++qvlgk+pti+iD +dg+
  KHJ35477.1 370 SAVKKFEGNKWFVENFDDESePIKIE-TSISQSILISRCKKTTIIVSGKANAISIDNSPNLSIIIDSLVSSIDIIKSPNFAMQVLGKIPTIMIDTVDGA 467
                 6899************86555****8.************************************************************************ PP

       CAP_C 100 qiyLskesldteivtsksseinvsvpk..eedgdykElpipeqfktkikkgklvtevveh 157
                 qiyLskesl tei++skss in+++ +  +edgdy+E+p+p q++t i++ k+++e+veh
  KHJ35477.1 468 QIYLSKESLGTEIFSSKSSGINLNILDptKEDGDYEEVPLPAQIRTWIEDAKVKNEIVEH 527
                 ************************87777*****************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (529 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      499  (0.027832); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.38
# Mc/sec: 4146.80
//
Query:       KHJ35478.1  [L=469]
Description: putative ca2+ h+ antiporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    4.8e-24   85.0  27.5    7.3e-13   48.7   7.8    2.1  2  Na_Ca_ex   Sodium/calcium exchanger protein
  ------ inclusion threshold ------
      0.015   14.2   7.2      0.022   13.6   5.5    2.0  2  Otopetrin  Otopetrin
      0.031   14.2   0.0      0.078   12.9   0.0    1.6  1  DUF1298    Protein of unknown function (DUF1298)


Domain annotation for each model (and alignments):
>> Na_Ca_ex  Sodium/calcium exchanger protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.4  11.8   1.1e-14   6.5e-11       3     150 ..     113     273 ..     111     274 .. 0.83
   2 !   48.7   7.8   1.2e-16   7.3e-13       3     145 ..     309     446 ..     308     452 .. 0.84

  Alignments for each domain:
  == domain 1  score: 42.4 bits;  conditional E-value: 1.1e-14
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCE... CS
    Na_Ca_ex   3 fvlfilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigslkvdses... 98 
                 +++fil +++++++a+++  +  e++   +   +v+G++l ++ +s+ E+i+ ++ ++++e ++  +++lGs+++  ll++G+++l+g++ +++++   
  KHJ35478.1 113 LLVFILNYFAMVPCANLIGFAGQEMS---RKLSKVFGVLLETTLGSMVEIIMFMVLIRNNEFQVIKAAILGSVLATQLLCLGTCFLVGGIRHNELEfse 208
                 789***********************...66666*******************************************************3333333444 PP

                 ....CCHHHHHHHHHHHHHHHHHHHTCHHHHH.............HTEEHHHHHHHHHHHHHHHHHHHH CS
    Na_Ca_ex  99 ....lkldlgllllvallllllvlllllplfv.............pgrltvleglvllllYalylvlsl 150
                     +  dl l+  +al++ +++ + +                    ++++ ++++l++++a+y+++++
  KHJ35478.1 209 vvgeVGSDLLLTAGFALIVPAAFHVAV----SgiesmtpgdinlrVLQISRITSVLLIIAFAIYTYFQI 273
                 444445555555555666655555544....15778999999*************************97 PP

  == domain 2  score: 48.7 bits;  conditional E-value: 1.2e-16
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHBTTSSCECCH CS
    Na_Ca_ex   3 fvlfilslllisvladflvssaeeiakslgisgsvlGltllAlgnslpElissiiaaltgevdlaignvlGsnifnlllviGlialigslkvdseslkl 101
                 ++++i+++ +++v+a  lv+ +  ++k  g+s+s++Gl+l++l+  + E++++i   + +++++a++ vlG+ i+  l+  +l++l+g+  +++    +
  KHJ35478.1 309 ILGLIFAIGVVAVIAVNLVEGIPFLVKERGVSDSFVGLILVPLVEKFAEHLTAIDESWDNQMNMALSHVLGATIQTSLFNGPLVVLVGWSLNKP----M 403
                 5789999********************************************************************************9944444....3 PP

                 HHHHHHHHHHHHHHHHHHTCHHHHH.HTEEHHHHHHHHHHHHHHH CS
    Na_Ca_ex 102 dlgllllvallllllvlllllplfv.pgrltvleglvllllYaly 145
                 dl++ l+ +++l+l++l++   +f+ + + ++leg++++++Y+ +
  KHJ35478.1 404 DLNFDLFNTIVLILAILVVG--NFLrDQKSNYLEGALCVIVYINI 446
                 44334455555545555544..33347***************976 PP

>> Otopetrin  Otopetrin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.6   5.5   3.7e-06     0.022     247     369 ..     144     265 ..     135     305 .. 0.69
   2 ?   -0.9   0.0     0.092   5.5e+02      68      94 ..     311     337 ..     296     373 .. 0.84

  Alignments for each domain:
  == domain 1  score: 13.6 bits;  conditional E-value: 3.7e-06
   Otopetrin 247 LflglL.llvltiislilFfvlvrkpklsslailladl.selvllalaiiaviigfirvrklkfrreeqleLddiLllisafGlfvysvfsiiaaslka 343
                  f+ lL   +++++ +i+F+vl+r+++++     ++     + ll+l +   ++g ir  +l+f++    e+ + Lll + f+l+v + f + +  ++ 
  KHJ35478.1 144 VFGVLLeTTLGSMVEIIMFMVLIRNNEFQVIKAAILGSvLATQLLCLGT-CFLVGGIRHNELEFSEV-VGEVGSDLLLTAGFALIVPAAFHVAVSGIES 240
                 44444434689*****************987665555526666666665.5678999*******554.446999999*************997776665 PP

   Otopetrin 344 eesepsllvlvtavvavvqvvlQllf 369
                  +    + + v ++ ++  v+l ++f
  KHJ35478.1 241 MTP-GDINLRVLQISRITSVLLIIAF 265
                 554.3333334444444444443333 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.092
   Otopetrin  68 kviarfgLmhlvatNlcvWirvlvkes 94 
                  +i   g++ ++a+Nl   i +lvke 
  KHJ35478.1 311 GLIFAIGVVAVIAVNLVEGIPFLVKER 337
                 56778899999******9999999994 PP

>> DUF1298  Protein of unknown function (DUF1298)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   1.3e-05     0.078      53     109 ..     351     409 ..     336     418 .. 0.79

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 1.3e-05
     DUF1298  53 lpakvaaal..ikrl...lsnttlviSNvpGPqeelylaGaplkaiypvvpglpgqalnitv 109
                 l +k+a++l  i       +++++++S v G + + +l++ pl+ +++++++ p + ln+ +
  KHJ35478.1 351 LVEKFAEHLtaI--DeswDNQMNMALSHVLGATIQTSLFNGPLVVLVGWSLNKP-MDLNFDL 409
                 555565555333..1446899********************************9.9998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (469 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       679  (0.0378716); expected 358.6 (0.02)
Passed bias filter:                      355  (0.0198003); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.55u 0.23s 00:00:00.78 Elapsed: 00:00:00.41
# Mc/sec: 3436.38
//
Query:       KHJ35479.1  [L=906]
Description: putative dna replication licensing factor mcm3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-98  327.0   0.2    6.6e-98  326.3   0.2    1.4  1  MCM              MCM P-loop domain
    2.5e-30  104.9   0.0    4.5e-30  104.1   0.0    1.4  1  MCM_OB           MCM OB domain
    2.4e-23   82.3   1.4    5.1e-23   81.3   1.4    1.6  1  MCM_lid          MCM AAA-lid domain
    3.9e-11   43.5   0.0    1.6e-10   41.5   0.0    2.0  1  MCM_N            MCM N-terminal domain
    1.5e-07   31.0   0.0    2.1e-06   27.3   0.0    2.3  2  Mg_chelatase     Magnesium chelatase, subunit ChlI
     0.0032   17.3   0.0     0.0077   16.1   0.0    1.7  1  AAA_3            ATPase family associated with various cellul
  ------ inclusion threshold ------
      0.014   15.1   0.0      0.034   13.9   0.0    1.6  1  Sigma54_activat  Sigma-54 interaction domain


Domain annotation for each model (and alignments):
>> MCM  MCM P-loop domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  326.3   0.2  2.6e-101   6.6e-98       2     224 .]     290     512 ..     289     512 .. 0.99

  Alignments for each domain:
  == domain 1  score: 326.3 bits;  conditional E-value: 2.6e-101
                 HHHHHHHHTSSTHHHHHHHHSSTTSSS-HHHHHHHHHHHH---EBBBSSSSBBCSS-EEEEEESSTSTHHHHHHHHHHHSSSEEEEESSSSSSSHSSSE CS
         MCM   2 veeikelakekdiieklvksiapsiyghedvkkaillqlfggvkkkledktklrgdinvllvgdpgtaKsqlLkyveklapravytsgkgssaagLtaa 100
                 +++i++++k+k++++ l++s+apsiyghe +kkaill+l+gg++k+le++t+lrgdin+l+vgdp+taKsqlL++v ++ap a+ t+g+gss++gLtaa
  KHJ35479.1 290 IRNINKVSKKKNLFDLLSQSLAPSIYGHEYIKKAILLMLLGGQEKNLENGTHLRGDINILMVGDPSTAKSQLLRFVLNTAPLAIATTGRGSSGVGLTAA 388
                 689************************************************************************************************ PP

                 EEEESSSSSEEEEETHHHHTTTSEEEEESGGGSTCHHHHHHHHHHHHSEEEEESSSCEEEEE--EEEEEEE--SSSSCCTTS-HHHHSSSSHHHHHHSS CS
         MCM 101 vvrdeetgefvleaGalvladkGvcciDefdkmkeedrsalhEamEqqtisiaKaGivatLnartsvlaAanpkagrydkkksvaeninlsaalLsrFD 199
                 v+ d+etge  leaGa+vlad+Gv+ciDefdkm++ dr+a+hE+mEqqt++iaKaGi+++Lnar+sv+aAanp++g+yd++k  ++ni l+++lLsrFD
  KHJ35479.1 389 VTSDKETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRVAIHEVMEQQTVTIAKAGIHTSLNARCSVIAAANPIFGQYDTHKDPHKNIALPDSLLSRFD 487
                 *************************************************************************************************** PP

                 EEEEE-SSTTHHHHHHHHHHHHHHH CS
         MCM 200 lifvllDkvdeekDeelaehivslh 224
                 l+fv+ D++++++D++++ehi+++h
  KHJ35479.1 488 LLFVVTDDIEDTRDRQISEHILRMH 512
                 **********************998 PP

>> MCM_OB  MCM OB domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  104.1   0.0   1.8e-33   4.5e-30       3     124 ..     117     247 ..     114     249 .. 0.86

  Alignments for each domain:
  == domain 1  score: 104.1 bits;  conditional E-value: 1.8e-33
                 GG--GGGTTSEEEEEEEEEEE---EEEEEEEEEEETTT-.-EEES---..............-SB-..TTT-HHH-EEE-GGGSEEEEEEEEEEE---- CS
      MCM_OB   3 RdlrsehigklvkveGivtrasevkpklkkavfeckkcgktvevelee..............PrkCeekeCeskdpfkletekskfvdfqklklQEspe 87 
                 R+l+s+ ++++v++eGivtr+s ++pk+ k+v++ ++ +  +  e+++              P++   +  es +p+  e   ++f+d+q+++lQE+pe
  KHJ35479.1 117 RTLSSSFLNRMVSLEGIVTRCSLIRPKVIKSVHYNENKKVFHFREFKDqtmtmngattssvyPQE---D--ESGNPLITEYGYCTFRDHQTISLQEMPE 210
                 99*********************************999964445555566666777766666662...2..33468888888***************** PP

                 ---------EEEEEEEGGGTT---TT-EEEEEEEEEE CS
      MCM_OB  88 evpaGelPrslevileddlvdkvkPGdrvevtGiyra 124
                 ++paG+lPr ++vil+ddlvdk+kPGdrv+++Gi+r+
  KHJ35479.1 211 RAPAGQLPRGVDVILDDDLVDKCKPGDRVQLVGIFRS 247
                 **********************************996 PP

>> MCM_lid  MCM AAA-lid domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.3   1.4     2e-26   5.1e-23       2      84 ..     578     661 ..     577     664 .. 0.93

  Alignments for each domain:
  == domain 1  score: 81.3 bits;  conditional E-value: 2e-26
                 HHHHHHHHHHHTT--BETCHHHHHHHHHHHHHHHHH.TSSTSSSST--HHHHHHHHHHHHHHHHHHTSSSE-HHHHHHHHHHHH CS
     MCM_lid   2 llrkYiayarekikPklseeakeklseaYvelRkee.edskrksipitvRqLesliRLseAlAklrlsevvteedveeairllk 84 
                 +++kYi+ya+++ikP+l++ a+e +se+Yv lR+++ ++s+rk+ p+tvR+Le++iRL++A+Ak rls+ v+e d+  a  +l+
  KHJ35479.1 578 FVKKYIQYAKSRIKPILTPYAAERISEIYVALRNDDmQGSQRKTSPMTVRTLETIIRLATAHAKARLSNRVEEVDALAAETILR 661
                 589********************************954459**********************************999987765 PP

>> MCM_N  MCM N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.0   6.3e-14   1.6e-10       5      81 ..      19      89 ..      13     125 .. 0.84

  Alignments for each domain:
  == domain 1  score: 41.5 bits;  conditional E-value: 6.3e-14
       MCM_N  5 edFLeefkddsededgekkYrdqlqemaerekttLevdlddLaafdeeLaeailenpkeylplleealkevvkklep 81
                ++FL+        + + + Yr+++  m++++ ++L v++dd+++ ++eLa+ + ++p ++ +++++alkev+++l +
  KHJ35479.1 19 QEFLDPS------DLSLRSYRSEIILMLQKNDRRLVVSIDDIRSRNSELADGLFNQPFDFSQAFDRALKEVIQTLPN 89
                5555544......334589*****************************************************88655 PP

>> Mg_chelatase  Magnesium chelatase, subunit ChlI
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.11   2.8e+02      21      41 ..     344     364 ..     332     374 .. 0.85
   2 !   27.3   0.0   8.3e-10   2.1e-06      93     161 ..     396     464 ..     389     491 .. 0.89

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.11
  Mg_chelatase  21 GgHnlllvGppGsGKtmlakr 41 
                   G  n+l+vG p + K+ l + 
    KHJ35479.1 344 GDINILMVGDPSTAKSQLLRF 364
                   7889************98765 PP

  == domain 2  score: 27.3 bits;  conditional E-value: 8.3e-10
  Mg_chelatase  93 ggskpkpGeislahnGvLfLDElpefkrkvlevLRePledgevtisrakakvefparfqlvaamNpcpc 161
                   g ++ + G++ la +Gv+ +DE+ +++     ++ e +e+++vti++a  +++  ar+ ++aa+Np   
    KHJ35479.1 396 GERRLEAGAMVLADRGVVCIDEFDKMSDIDRVAIHEVMEQQTVTIAKAGIHTSLNARCSVIAAANPIFG 464
                   5668899********************99999**********************************753 PP

>> AAA_3  ATPase family associated with various cellular activities (AAA)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.1   0.0     3e-06    0.0077      47     114 ..     391     463 ..     348     488 .. 0.77

  Alignments for each domain:
  == domain 1  score: 16.1 bits;  conditional E-value: 3e-06
       AAA_3  47 feekekefefkkGpvf.an..llladeinrappktqsalleameerqvtvege..thklpepflvlatqnPie 114
                  ++++ e ++++G+++ a+  ++  de ++ +   + a+ e+me+++vt++++   ++l+    v+a+ nPi 
  KHJ35479.1 391 SDKETGERRLEAGAMVlADrgVVCIDEFDKMSDIDRVAIHEVMEQQTVTIAKAgiHTSLNARCSVIAAANPIF 463
                 566667778888876523244999*************************9875226789************93 PP

>> Sigma54_activat  Sigma-54 interaction domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.0   1.3e-05     0.034      79     142 ..     395     460 ..     392     470 .. 0.90

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 1.3e-05
                      TTTSS-BEHHHHHTTTSEEEEETGGGS-HHHHHHHHHHHHHSEE..ESBTSSSEEE--EEEEEEES CS
  Sigma54_activat  79 tGAekekkGlfekadgGtlfLDeigelplelQekLlrvlqegev..ervGsskeikvdvriiaatn 142
                      tG ++ ++G++  ad G++ +De  +++    + + +v+++++v   + G +++ ++ + +iaa+n
       KHJ35479.1 395 TGERRLEAGAMVLADRGVVCIDEFDKMSDIDRVAIHEVMEQQTVtiAKAGIHTSLNARCSVIAAAN 460
                      67778889*******************************9997522699***************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (906 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       769  (0.0428914); expected 358.6 (0.02)
Passed bias filter:                      406  (0.0226449); expected 358.6 (0.02)
Passed Vit filter:                        45  (0.0025099); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.68u 0.29s 00:00:00.97 Elapsed: 00:00:00.44
# Mc/sec: 6224.63
//
Query:       KHJ35480.1  [L=437]
Description: putative pfkb family carbohydrate kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.8e-13   50.5   0.0    2.7e-08   33.5   0.0    2.1  2  PfkB      pfkB family carbohydrate kinase


Domain annotation for each model (and alignments):
>> PfkB  pfkB family carbohydrate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   6.3e-07     0.011     111     245 ..     109     269 ..      40     274 .. 0.82
   2 !   33.5   0.0   1.5e-12   2.7e-08     249     298 ..     337     386 ..     330     390 .. 0.92

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 6.3e-07
                 GGGGHHHHHHHHHHHHHGCTSEEEEES...EECTTSH.HHHHHHHHHHHHHTTE..EEEEECESSSHH.....HHHHHHHHHCTESEEEEEHHHHHHHH CS
        PfkB 111 aaadltkeeleededlleeadllyisg...llsselp.eavleelaeaaknggt..fdpnlldplgaq.....fkeallellaladllkpneeElealt 198
                  + ++ + +   ++++le+   + +s+   l+ss+l+  ++++el +a+k+      +p+++   g++      +  l ++l+++d+  pn+ El  ++
  KHJ35480.1 109 RNFKYLTPKIPVHVSDLENQPAFLMSKsfhLISSPLRcISIVKELLHARKQLSPlaPKPIIVWEPGPSsclpsELLNLTNCLPYIDICSPNHVELLGFF 207
                 4445555556677777888888888877886666666479999*********9999888877666666677766778999***************9999 PP

                 TSCT...............HSHHHHHHHHHHHHHTTSSEEEEEEGGGEEEEEETTEEEEEEE CS
        PfkB 199 gekl...............edieealaalhklkakgaktvvvtlGkeGalvvekdgelkvpa 245
                 ++                 ++ie+a ++l +  + ++  +v+ +G  G++v++++g ++ p+
  KHJ35480.1 208 SSLPasdekndsshsildtAAIESACEQLLAAMPLQTYALVIRCGPHGVYVAKNGGRSRRPS 269
                 888789999*******87777777777777766667799*************9999888876 PP

  == domain 2  score: 33.5 bits;  conditional E-value: 1.5e-12
                 SS-SBGTTHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTSSSSSTC CS
        PfkB 249 vkvvDttGAGDsfvggflaallegksleealrfanavAalvvqkkgaias 298
                   v+D+tGAG sf g++++al++gk leea+  ++ +A++++++ g+  +
  KHJ35480.1 337 DRVIDPTGAGNSFLGALAVALARGKVLEEAVCWGSVAASFMLEQVGVPIC 386
                 579****************************************9997665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (437 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       308  (0.0171789); expected 358.6 (0.02)
Passed bias filter:                      276  (0.0153941); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.38
# Mc/sec: 3431.98
//
Query:       KHJ35481.1  [L=362]
Description: putative u3 small nucleolar ribonucleoprotein lcp5 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.6e-13   49.9   2.6    3.6e-13   49.9   2.6    2.4  2  Sas10_Utp3  Sas10/Utp3/C1D family


Domain annotation for each model (and alignments):
>> Sas10_Utp3  Sas10/Utp3/C1D family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   2.6     2e-17   3.6e-13       1      87 []      11      94 ..       4      94 .. 0.80
   2 ?   -1.1   0.8      0.17   3.1e+03       5      27 ..     120     143 ..     114     165 .. 0.52

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 2e-17
  Sas10_Utp3  1 leslsksldelqeslepllskakaeekkslsdeklsegisllslKnelllaYllnlllylllklsg.velkdhp...........vvkeLvrlRvyleK 87
                l+sl+k+l+++++sle+l +             + + gisl ++Kne++l+Yl+nl+++l+l l+  +    +p           v k+Lv+l+ y++K
  KHJ35481.1 11 LDSLTKALNSAHSSLEKLETP-----------LNVEQGISLFDVKNEIFLSYLHNLVFLLVLNLRHqK----SPndketqtisdsVTKKLVELQIYIDK 94
                678888888888888888772...........22345*****************************62....2333346667777***********998 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.17
  Sas10_Utp3   5 sksldelqeslepllskakaee.k 27 
                 s+s+++ ++     +s++++e  +
  KHJ35481.1 120 SESITASKSEKNASQSDSEDESeD 143
                 444444444444444432222221 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (362 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1505  (0.0839422); expected 358.6 (0.02)
Passed bias filter:                      422  (0.0235373); expected 358.6 (0.02)
Passed Vit filter:                        34  (0.00189637); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2667.26
//
Query:       KHJ35482.1  [L=398]
Description: putative integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.7e-15   54.9   5.3    1.3e-14   54.4   5.3    1.2  1  SUR7      SUR7/PalI family
    0.00018   21.5   4.1    0.00034   20.6   4.1    1.4  1  Fig1      Ca2+ regulator and membrane fusion protein Fig1


Domain annotation for each model (and alignments):
>> SUR7  SUR7/PalI family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.4   5.3   1.4e-18   1.3e-14       3     208 ..      10     331 ..       8     335 .. 0.88

  Alignments for each domain:
  == domain 1  score: 54.4 bits;  conditional E-value: 1.4e-18
        SUR7   3 lillflslaalilllfailgsiknstpltsiylskfdlsgldlaqi..................................................... 48 
                 +i++f   +alil++++++g   +s +l+++  +++++s + +  i                                                     
  KHJ35482.1  10 IIIIFNGTIALILSVIVVVGNA-KSDTLQKYATIELNTSTIFQDIIkttssssnsrrdlsdilptplpsqprfdarglivaraddplsrassffnsirt 107
                 67888889**************.999*************333333489*************************************************** PP

        SUR7  49 ................................................gladvysfgvwgyC..........dnsdvnytkCskpkagypfdp.l.eel 87 
                                                                 g++++y   +   C           +    + +Cs+ + +   dp + + +
  KHJ35482.1 108 silpqptgaiaggfsslanqalsqiakifgesindalnsliseivdevGIREWYGLYFGVLCsadykpnfrdPDATLANISCSSLRGSV-DDPeIpSTF 205
                 **********************************************************************98677778889***88887.456666666 PP

        SUR7  88 nsesngkvd.....lPsnlrktlsklnnltkalfilhiialvlsfislvvgllaicvspdnsrl.lsflnl.llsvlsflatllaalldtllfvfvrkk 179
                 + ++++  d     +Ps+l+k +  l ++ k+l il i++++l+ ++++v+ + ++    + r+ + +l + l+++l+++++ll+all+ ++ +++   
  KHJ35482.1 206 QVGTTTL-DvsvldIPSKLTKVVGQLTTVLKILYILGIVGIILTGVLILVSPILFI---AKFRRpIIHLGIgLIATLAAVLLLLTALLQSIIAILIGSI 300
                 6665533.347799************************************888887...4444335555556888888888899999988888888889 PP

        SUR7 180 in..lkefgikaslglkflafaWlalaaall 208
                 in  ++ fgi+a+ g+  l +aW++++++ +
  KHJ35482.1 301 INqlASGFGISAKAGVPLLVIAWISVILVSI 331
                 99999********************998765 PP

>> Fig1  Ca2+ regulator and membrane fusion protein Fig1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   4.1   3.8e-08   0.00034      43     183 ..     200     337 ..     164     342 .. 0.66

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 3.8e-08
        Fig1  43 elasllslsssssskstsdplnlvelakkfsdnvvhpyllmvaiiLtlllfllllyfpl....gseipllPfkskavskvalvlsfll.lllwlvgalw 136
                 e++s+++       ++t+ +++ +++ +k++ +v + +l  v  iL +l+++ ++  ++     s i +++  ++++  + ++l+++l ++l+l++al+
  KHJ35482.1 200 EIPSTFQ------VGTTTLDVSVLDIPSKLT-KV-VGQLTTVLKILYILGIVGIIL-TGvlilVSPILFIAKFRRPIIHLGIGLIATLaAVLLLLTALL 289
                 3333333......444444566666666665.43.334444444444444444332.1223336667888888888999999988765499999***** PP

        Fig1 137 qhvassaastlveeasmgi.vkskvGkkaealgWfafaflllvclglw 183
                 q + +  + +++++++ g  +++k G+ + +++W++++++ + + +l+
  KHJ35482.1 290 QSIIAILIGSIINQLASGFgISAKAGVPLLVIAWISVILVSIPATILL 337
                 *9999999999999999999********************99777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (398 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1085  (0.0605165); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.28s 00:00:00.85 Elapsed: 00:00:00.46
# Mc/sec: 2619.27
//
Query:       KHJ35483.1  [L=286]
Description: putative catechol dioxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    2.9e-47  160.5   0.0    3.8e-47  160.1   0.0    1.2  1  Dioxygenase_C    Dioxygenase
    1.1e-25   89.3   0.2    1.9e-25   88.5   0.2    1.3  1  Dioxygenase_N    Catechol dioxygenase N terminus
     0.0011   19.2   0.0     0.0032   17.7   0.0    1.8  2  CarboxypepD_reg  Carboxypeptidase regulatory-like domain
  ------ inclusion threshold ------
      0.027   14.5   0.1         14    5.8   0.0    3.1  4  CarbopepD_reg_2  CarboxypepD_reg-like domain
      0.031   14.6   0.0      0.059   13.7   0.0    1.4  1  SpaA             Prealbumin-like fold domain
      0.059   13.6   0.0       0.11   12.7   0.0    1.5  1  SdrD_B           SdrD B-like domain
      0.099   13.2   0.0       0.23   12.0   0.0    1.6  1  Lipase_C         Lipase C-terminal domain


Domain annotation for each model (and alignments):
>> Dioxygenase_C  Dioxygenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.1   0.0   1.5e-50   3.8e-47       2     180 ..     107     283 ..     106     285 .. 0.96

  Alignments for each domain:
  == domain 1  score: 160.1 bits;  conditional E-value: 1.5e-50
                    --S--EET--EEESEEE---S--TT--EEEEEEEEE-TTS.SB-TT-EEEEE---TTS--TTS-TTS-SSTTTTEEEEE--TTSEEEEEEE----E CS
  Dioxygenase_C   2 egPlyveeapededlarledkgeeegerlvlsGrvldeaG.kplagalvelWhanaeGrYshkkeeheapelnlrgriltdeeGryrirtikPapY 96 
                     gP+y ++ap  e++ + ++ + +e  +++++G v d +  kplaga v++W+an  G Y++++++  + ++nlrg++ td++G+y + +++P+pY
     KHJ35483.1 107 LGPFYRHDAPVRENESSISQ-PADEKDTIYVHGIVSDLNTkKPLAGAWVDVWQANGIGLYEQQDQH--QVDYNLRGKFKTDKNGHYGFYSVQPGPY 199
                    69************999999.889999**********86527**********************99..99************************** PP

                    E--TTSHHHHHHHHTT---EE-SEEEEEEE-TTB--EEEEEEETT-TTTTS-TT----TTTEE--EEE-SHS-.EEEEE--EE- CS
  Dioxygenase_C  97 pipndGptgklldalgrhawRPaHiHfsvsapghrklvTqlyfegdkyladdivsaakeeLiaeleesedeeekalelefdlvL 180
                    pip dGp+g+ll  lgr  +RPaHiH +   +g+++l+Tq+y + d+yl++d v+a+k++Li+++e  e + + +le++f + L
     KHJ35483.1 200 PIPSDGPAGDLLTLLGRPIYRPAHIHIIARCEGYKSLITQIYNRKDPYLKNDAVFAVKDSLIVDFEPMEGNSKAKLEVNFPIIL 283
                    ********************************************************************************9988 PP

>> Dioxygenase_N  Catechol dioxygenase N terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.5   0.2   7.3e-29   1.9e-25       3      73 ..      26      96 ..      25      98 .. 0.96

  Alignments for each domain:
  == domain 1  score: 88.5 bits;  conditional E-value: 7.3e-29
                   HHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHH.....TT-HHHHHHHTTHHHHHHHHHHHHHHH CS
  Dioxygenase_N  3 RlkeiverlvrhlhdfirevdlteeEwwaavdfLtrvGqisddkrqEfiLlsdvLGlehlvdaindakeag 73
                   R+++++++l++hlhdf+re ++t +E++aa++f++++G++sd+kr+E  Ll+d+LGle+l+++i+  ke++
     KHJ35483.1 26 RIRQVMSSLIKHLHDFARENEITFDEMMAAIEFINSAGKMSDEKRNETLLLCDILGLESLLEEIALSKENK 96
                   99**************************************************************9887765 PP

>> CarboxypepD_reg  Carboxypeptidase regulatory-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.7   0.0   1.2e-06    0.0032       2      51 ..     136     200 ..     135     206 .. 0.85
   2 ?   -3.7   0.0       5.8   1.5e+04      49      62 ..     223     236 ..     220     240 .. 0.75

  Alignments for each domain:
  == domain 1  score: 17.7 bits;  conditional E-value: 1.2e-06
  CarboxypepD_reg   2 isGrVtda.sgapiagatVtvtnadtg...............tvastttdadGafrlrglppgtys 51 
                      ++G V d  +++p+aga V v + ++g                +   +td++G++ + +++pg+y 
       KHJ35483.1 136 VHGIVSDLnTKKPLAGAWVDVWQ-ANGiglyeqqdqhqvdynLRGKFKTDKNGHYGFYSVQPGPYP 200
                      79*****659***********94.4445677777778777767999*******************6 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 5.8
  CarboxypepD_reg  49 tysvtvsapGyata 62 
                       + + ++ +Gy++ 
       KHJ35483.1 223 HIHIIARCEGYKSL 236
                      56788999999986 PP

>> CarbopepD_reg_2  CarboxypepD_reg-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0       1.6   4.2e+03      43      70 ..      70      97 ..      64     102 .. 0.72
   2 ?    5.0   0.0    0.0097        25       1      21 [.     136     156 ..     136     166 .. 0.83
   3 ?    5.8   0.0    0.0054        14      28      47 ..     181     200 ..     174     202 .. 0.88
   4 ?   -3.0   0.0         3   7.6e+03      47      62 ..     225     240 ..     221     250 .. 0.75

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 1.6
  CarbopepD_reg_2 43 agkytLvvsyvGyktqekkvtvskektl 70
                     +++  L +  +G ++  +++ +ske++ 
       KHJ35483.1 70 RNETLLLCDILGLESLLEEIALSKENKD 97
                     5556677788899999899998887654 PP

  == domain 2  score: 5.0 bits;  conditional E-value: 0.0097
  CarbopepD_reg_2   1 isGtVvdketkeplpgatVyv 21 
                      ++G V+d +tk+pl+ga V v
       KHJ35483.1 136 VHGIVSDLNTKKPLAGAWVDV 156
                      6799************98855 PP

  == domain 3  score: 5.8 bits;  conditional E-value: 0.0054
  CarbopepD_reg_2  28 tvTdenGnFelknlpagkyt 47 
                        Td+nG++ + ++++g y 
       KHJ35483.1 181 FKTDKNGHYGFYSVQPGPYP 200
                      57***************995 PP

  == domain 4  score: -3.0 bits;  conditional E-value: 3
  CarbopepD_reg_2  47 tLvvsyvGyktqekkv 62 
                      ++++++ Gyk+   ++
       KHJ35483.1 225 HIIARCEGYKSLITQI 240
                      6788999999976665 PP

>> SpaA  Prealbumin-like fold domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   2.3e-05     0.059       1      56 [.     144     199 ..     144     201 .. 0.81

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 2.3e-05
                 TCCCB-TS-EEEEEETT.....TSCCCHCHHTT.TTCCEESEEE-BTTSEEEEEEEESEEE CS
        SpaA   1 dtgkpLaGaeFtlykvd.....tttdgkdaleakktgtevttlttdenGkatfegLplGtY 56 
                 +t+kpLaGa   +++++     + ++ ++++    + +  ++++td+nG+  f  +++G Y
  KHJ35483.1 144 NTKKPLAGAWVDVWQANgiglyE-QQDQHQV----DYNLRGKFKTDKNGHYGFYSVQPGPY 199
                 589*************9888742.3333333....46889*****************9988 PP

>> SdrD_B  SdrD B-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.7   0.0   4.3e-05      0.11      40      69 ..     179     208 ..     142     215 .. 0.84

  Alignments for each domain:
  == domain 1  score: 12.7 bits;  conditional E-value: 4.3e-05
      SdrD_B  40 atttTdasGkYkFtnltpGeYkVeftapag 69 
                  +  Td++G+Y F +++pG Y +    pag
  KHJ35483.1 179 GKFKTDKNGHYGFYSVQPGPYPIPSDGPAG 208
                 5678*****************998777776 PP

>> Lipase_C  Lipase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0     9e-05      0.23       2      71 ..     133     197 ..     132     201 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 9e-05
                 EEEEEEEEEETTT--B-E.EEEEEEEB-T.TS-BSSSS-SEEEEEE..SEE.EEEEETT--EEEEEEETT CS
    Lipase_C   2 kvklaGkvvgfptNlplsgarlevyevdadtGkRktrapvkstrvaadGrfGplaarggqsyEfvlsrpg 71 
                 ++ ++G v+ + t +pl+ga+++v++ +   G  +++  +++      G+f   +++++  y f  ++pg
  KHJ35483.1 133 TIYVHGIVSDLNTKKPLAGAWVDVWQANG-IGLYEQQDQHQVDYNL-RGKF---KTDKNGHYGFYSVQPG 197
                 57899********************9876.6666666655555444.4444...7778888888777777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (286 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      420  (0.0234257); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.45u 0.24s 00:00:00.69 Elapsed: 00:00:00.40
# Mc/sec: 2151.84
//
Query:       KHJ35484.1  [L=647]
Description: putative endosomal integral membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   6.5e-205  681.7   9.3   8.8e-205  681.3   9.3    1.2  1  EMP70     Endomembrane protein 70


Domain annotation for each model (and alignments):
>> EMP70  Endomembrane protein 70
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  681.3   9.3  4.9e-209  8.8e-205       2     515 ..      66     600 ..      65     604 .. 0.95

  Alignments for each domain:
  == domain 1  score: 681.3 bits;  conditional E-value: 4.9e-209
       EMP70   2 ydYyd.llpfCkpeeekkkesesLgevLrGdrienspyelkfgkdeeckvlCt.kkltkeelkklkelIkngYvvnwlvDnLPva.........tsfvs 89 
                 +dYy+  ++fC+p+ + +   esLg++L+Gdri++sp+elk+ ++e+ck+lC+ kk++  ++++++++I +g+ +nwlvD+LP+          t+f+s
  KHJ35484.1  66 FDYYHpAFHFCRPSPQPEYVPESLGSILFGDRIMTSPFELKMARNETCKTLCSgKKFDPISAQFVNRRITQGFAMNWLVDGLPAGqliedemtnTKFYS 164
                 89**99*******965677789*******************************9*******************************99999999999999 PP

       EMP70  90 aaGfplGfvdkeeekekyylnnhldfviryhkakeeekkrivgfevepksvkde.e..e....eeCpkea.eleleeekkeeeteipftYsVkwresed 180
                  +Gf lG  d+    ++ y+nnh+d+ i+yh++ ++  +r+vg+ v+p+s + + e  +    ++C   a +++l+e   + ete+ ftYsV+w +s+ 
  KHJ35484.1 165 -QGFALGSADQ----KNLYFNNHYDILIDYHET-SSGFYRVVGVIVQPDSRAIKkEdeSvkntQNCGLGApKITLDE---KGETEVDFTYSVYWLKSS- 253
                 .6*****9996....79**************87.55778***********987743441444566775554566666...699**************8. PP

       EMP70 181 vewasRwdlylesvedskihwfsiinslvivlllslivavillrtlrkdiarynee............eeee.aqeesgWKlvhgdVfrpPknsllLsv 266
                 + wa+Rwd+yl +v d+kihwfs+ins++iv++l+++v+ +llr+l+kdiaryn+             + ++ +qe+sgWKlvhgdVfr+P+ +l+Lsv
  KHJ35484.1 254 TAWATRWDKYL-HVFDPKIHWFSLINSTIIVVFLVVTVMSVLLRALKKDIARYNRLdsfnlddlsgtsAIDDgIQEDSGWKLVHGDVFRSPSSALILSV 351
                 ***********.899****************************************99**9999998874446699************************ PP

       EMP70 267 lvGsGvqlllmalvtlllallgflspsnrgslltvalllyvllgliaGYvsarlyktfggekwkkntlltalllpgllflvffllnlilwakessgalp 365
                 ++G+G+ql++m+ +t+++allgflspsnrgsl t+++lly++lgl++GYvs+r+y++fgge+wk n++lt++l+pg++f++ffllnl+lwakessga+p
  KHJ35484.1 352 FLGNGAQLFIMTGLTIIFALLGFLSPSNRGSLGTIMVLLYTVLGLVGGYVSSRVYNFFGGENWKLNIVLTPTLVPGIVFSTFFLLNLFLWAKESSGAVP 450
                 *************************************************************************************************** PP

       EMP70 366 fgtlvlllllwflisvPlvliGsllgfkkkaiehpvrtnqiprqipkqpwylkpllsvllgGilpFgaifielyfilsslwlekiYylfgfLflvflll 464
                 f+t+++l+ +wflisvPl+l Gs++gf++++i+ pv+tnqiprqip+ ++ylkp++s+ll+GilpFgaif+elyfi+ss+wl+k Yy+fgfLfl++ l+
  KHJ35484.1 451 FTTMLVLVGIWFLISVPLSLTGSWFGFRQPSISPPVHTNQIPRQIPPCSVYLKPIPSMLLVGILPFGAIFVELYFIMSSIWLSKAYYMFGFLFLCYSLM 549
                 ****************************9999******************************************************************* PP

       EMP70 465 iittaevtilltYfqLcaedyrWwWrSflvggssalYvflysiyYyftklk 515
                 +it+a vtil++Yf Lc+e+y+W+WrSf ++g+sa Yvf+ +i+Y++tkl+
  KHJ35484.1 550 VITCAAVTILMVYFLLCSENYHWHWRSFTTAGASAGYVFANAIIYWLTKLQ 600
                 *************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (647 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       946  (0.0527637); expected 358.6 (0.02)
Passed bias filter:                      360  (0.0200792); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.69u 0.26s 00:00:00.95 Elapsed: 00:00:00.44
# Mc/sec: 4429.19
//
Query:       KHJ35485.1  [L=144]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (144 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       339  (0.0189079); expected 358.6 (0.02)
Passed bias filter:                      285  (0.015896); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.24s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 1069.92
//
Query:       KHJ35486.1  [L=467]
Description: putative palmitoyltransferase pfa3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.8e-40  136.5   6.9    5.8e-40  136.5   6.9    2.4  2  DHHC      DHHC palmitoyltransferase


Domain annotation for each model (and alignments):
>> DHHC  DHHC palmitoyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   4.9      0.27   4.9e+03      42      82 ..      14      54 ..      11      88 .. 0.47
   2 !  136.5   6.9   3.2e-44   5.8e-40       3     132 ..     105     230 ..     103     232 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.27
        DHHC 42 ciGerNykyFllfllylllllilalvlllialvklveeekk 82
                c G+  +  F+++ l+++ l +++++ +l a ++ v + + 
  KHJ35486.1 14 CLGATYFPLFFVYSLTTWALWVVTTIGFLSAKTNWVGSGTS 54
                55555555554444444444444444444443333333333 PP

  == domain 2  score: 136.5 bits;  conditional E-value: 3.2e-44
        DHHC   3 kelkfCstcniykpprskHcrvCnrcvlrfDHhCpwlnnciGerNykyFllfllylllllilalvlllialvklveeekkseflavtllkkllsilllv 101
                  +l++C++c+ +kp+r++Hc++C+ cvl++DHhCpwl +c+G rNyk+Fllfl+y++l+++l++ ++ + +++++ +e + ++  +++++    ++l+v
  KHJ35486.1 105 GGLRYCKKCQARKPDRAHHCSTCKVCVLKMDHHCPWLATCVGLRNYKAFLLFLFYTTLFCFLCFGVSGYWVWREIANEGQYTESLMPINY----VILVV 199
                 5789********************************************************************************999998....***** PP

        DHHC 102 lsllfllllgllllfhlylilrnlTtieamk 132
                 +s +++l+l+ ++  h+ l++r++Ttie ++
  KHJ35486.1 200 ISGIIGLMLAGFTGWHILLASRGQTTIECLE 230
                 ***************************9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (467 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       957  (0.0533772); expected 358.6 (0.02)
Passed bias filter:                      427  (0.0238162); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.21s 00:00:00.72 Elapsed: 00:00:00.36
# Mc/sec: 3890.02
//
Query:       KHJ35487.1  [L=254]
Description: putative -dihydroxy-2-butanone 4-phosphate synthase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.7e-66  222.3   0.0    1.9e-65  220.0   0.0    1.8  1  DHBP_synthase  3,4-dihydroxy-2-butanone 4-phosphate synthase


Domain annotation for each model (and alignments):
>> DHBP_synthase  3,4-dihydroxy-2-butanone 4-phosphate synthase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.0   0.0   1.1e-69   1.9e-65       2     191 ..      12     242 ..      11     243 .. 0.88

  Alignments for each domain:
  == domain 1  score: 220.0 bits;  conditional E-value: 1.1e-69
                    HHHHHHHTT--EEEESSTTTT-BEEEEEEGGG--HHHHHHHHHHB-S--EEEEEHHHHHHTT--BSSSS-S.................STT---BB CS
  DHBP_synthase   2 eaiealkaGkfvivvDdedrenegdLiiaAekvtpekvafmirhasGlicvalteeradeLeLplmveene.................dkhktaft 80 
                    e iea+++G+f+iv+D++ renegdL+iaA+++tpek+afmi+h+sGlic++l ++ a+eL+Lp+mv++                      + + +
     KHJ35487.1  12 ESIEAFRDGNFLIVLDSPARENEGDLVIAASAITPEKMAFMIHHTSGLICTPLLPSLAKELQLPQMVSQVAsedpnktaytvsnmtyiRLANPNLM 107
                    789****************************************************************74335656666666666666633445555 PP

                    --EEESS.T-SSS-SHHHHHHHHHHHH-T............T--GGGEEEEEEEEEEEE-TTGGGTS-SHHHHHHHHHHHTTS-SBEEEEEBB-TT CS
  DHBP_synthase  81 vsvdaae.gttTGIsaaDRalTirkladp............kakpedfrrPGhvfplrareggvleRrghTEaavdLarlaglkpaavicellndd 163
                     +vda++ ++tTGIsa+DRalT++ la+              +k++ frrPGh+fplra+eg ++ R+ghTEaa++++rla l+ ++vi+el++  
     KHJ35487.1 108 ATVDANHsSITTGISAHDRALTCKLLASCatiitpnsddgkMSKASLFRRPGHIFPLRAQEGLTRIRQGHTEAALEFCRLAKLPMVGVISELVE-C 202
                    566666567*******************5579999***9987799************************************************6.3 PP

                    S............CB-BHHHHHHHHHHHT-EEEEHHHHHH CS
  DHBP_synthase 164 g............tmarrdeleefakkhglkiitiedlie 191
                    g             m+r + + +f+kk+glk++tiedl++
     KHJ35487.1 203 GvevegkaerrdpGMMRGEACLNFSKKWGLKCCTIEDLVS 242
                    34566788888888************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (254 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       397  (0.0221429); expected 358.6 (0.02)
Passed bias filter:                      365  (0.0203581); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.46u 0.23s 00:00:00.69 Elapsed: 00:00:00.41
# Mc/sec: 1867.18
//
Query:       KHJ35488.1  [L=834]
Description: putative serine threonine protein kinase protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.8e-19   68.0   1.9    7.8e-19   68.0   1.9    2.0  2  MS_channel  Mechanosensitive ion channel
  ------ inclusion threshold ------
       0.18   11.5   0.1       0.45   10.2   0.1    1.7  1  EF-hand_1   EF hand


Domain annotation for each model (and alignments):
>> MS_channel  Mechanosensitive ion channel
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.0   1.9   8.6e-23   7.8e-19       3     168 ..     455     620 ..     452     650 .. 0.79
   2 ?   -0.5   0.1     0.086   7.7e+02      99     126 ..     727     750 ..     726     814 .. 0.76

  Alignments for each domain:
  == domain 1  score: 68.0 bits;  conditional E-value: 8.6e-23
                 HHHHHHHHHHHHHHHHTTT--SCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTT-.SS-TT-EEESSSEEEEEEEE-SSEEEEEETTS.EEEEEEHH CS
  MS_channel   3 ilkiliivvgilivlsllgvnvsallavlGalglalglalkdlisnlvaGiillfek.pfkiGDlveigdieGtVediglrttkirtfdg.rivtiPns 99 
                 +l+ +++v++il++  + +  + + la +G++ l+l++++  + ++++++ i+lf k p+++GD+ +i++ +  Ve i+l++t +++ d  r+v iPn 
  KHJ35488.1 455 VLTTILLVIVILTFVAFQHTTFITTLATAGTTLLSLSFVFAATTQEFLGSCIFLFVKhPYDVGDRCDISNTTLVVERISLLFTVFKRIDTmRMVQIPNM 553
                 444455555555555555555556667788999****************988888777***************************9987549******* PP

                 HHHTS-EEESSS.SSEEEEEEEEEE-TTS-...HHHHHHHHHHHHHH-TTB-TTS-EEEEEEEE-SSSE CS
  MS_channel 100 slvtsnieNlsresgtrrikvsigvtyssdvkklekvleelkealkekpevlkdkellvvldefgdssl 168
                  l t  ieN sr s++++ +++i + ++++ + +e +++ + +++ ++pe  +d +++v++++++ +s+
  KHJ35488.1 554 VLNTLWIENTSR-SKAMKEQIEIFISFDTPLEDIETLRSLMERFV-RHPENSRDFQPEVIMETISVNSM 620
                 ************.*****************886666665555555.56666668999999998887764 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.086
                 HHHHTS-EEESSS.SSEEEEEEEEEE-T CS
  MS_channel  99 sslvtsnieNlsresgtrrikvsigvty 126
                 s+l+++ i+Nlsr      i  +i+v  
  KHJ35488.1 727 SQLSEEPIKNLSR----NNISADIQVSE 750
                 78999********....34444444444 PP

>> EF-hand_1  EF hand
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.2   0.1     5e-05      0.45       3      23 ..     405     425 ..     403     426 .. 0.91

  Alignments for each domain:
  == domain 1  score: 10.2 bits;  conditional E-value: 5e-05
                 HHHHHHHTTTSSSEEEHHHHH CS
   EF-hand_1   3 keiFrefDkDgdGkIdfeEfk 23 
                 +e F+++D D +G +++eE++
  KHJ35488.1 405 EECFAVLDEDSNGDVSLEEMI 425
                 799****************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (834 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1377  (0.0768029); expected 358.6 (0.02)
Passed bias filter:                      617  (0.0344135); expected 358.6 (0.02)
Passed Vit filter:                        48  (0.00267723); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.72u 0.28s 00:00:01.00 Elapsed: 00:00:00.44
# Mc/sec: 5707.66
//
Query:       KHJ35489.1  [L=382]
Description: putative nicotinate phosphoribosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.3e-52  176.6   0.0    7.8e-52  176.3   0.0    1.1  1  NAPRTase    Nicotinate phosphoribosyltransferase (NAPRTase) f
    6.6e-12   45.9   0.0    1.5e-11   44.8   0.0    1.6  1  NAPRTase_N  Nicotinate phosphoribosyltransferase (NAPRTase) N


Domain annotation for each model (and alignments):
>> NAPRTase  Nicotinate phosphoribosyltransferase (NAPRTase) family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.3   0.0   8.7e-56   7.8e-52       1     238 [.     117     365 ..     117     368 .. 0.95

  Alignments for each domain:
  == domain 1  score: 176.3 bits;  conditional E-value: 8.7e-56
                 GSEEE-TSTTSSSHHHHHHHHHHHHH........HHTTTEEEESBHHHHHHHT--B--HHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHC.CHII CS
    NAPRTase   1 fklhDFGtRrrsslesqeivvkalkk........ahlvnflGtdnvlaaakysikaaetsahealgkeqelsafrnnlkqfqkdaldlwvaiek.gnlg 90 
                 +++++FGtRrr+++++q +v+++l +        +  + ++Gt+n + a++++i + +t+ahe++++ +++s    +++ + + al+ w+ +++ +nlg
  KHJ35489.1 117 CNFTEFGTRRRRDYQTQVLVMRGLLRaqkdgeerELVGRLSGTSNPYHAMQFGIMPQGTIAHEWFMGVAAISD---DYEAATYHALKYWMDCFGkENLG 212
                 6799********************99999*99999999**********************************9...*****************9889** PP

                 EEECHCCTHHHHHCCS-CC..........HHHSEEEEE-SS-HHHHHHHHHHHHHCTCTTTCCCSEEEEESS-SHHHHHHHHHHHHHTTCEEEEEESHH CS
    NAPRTase  91 iaLtdlvltdaflkdfrle..........akaylgvRpDSGdpvevieklaahygstlnskgytkrlifsDgldvekiieilealkkkgfniaFGiGtn 179
                   Ltd+++t afl++fr+           a+ ++gvR+DSGdp++ ++ + + y +   +k  +k+++fsD+l+ve+++++ e + + gf  +FGiGt 
  KHJ35489.1 213 YVLTDTFGTPAFLRSFRQPlpgfadgetfAASFKGVRQDSGDPMQFVKLMKSFYVKE-DIKE-KKTIVFSDSLNVESCLAYKELAIEAGFECIFGIGTF 309
                 ****************9877788778888999***************9999999888.6664.79******************99999*********** PP

                 HHSSECTTCTTTCCEEEEEEEEEEEEEETTEETTBGGSSCCGSBGSGHHHHHHHHHHCT CS
    NAPRTase 180 ltqdlnrdtlefavkasalniviklvevnkdpvakisdrskkgrlgdkefvkllrtvfk 238
                 +t+d+    ++  +k+s+lniv+kl  +  +p++k+sd+ +k + gd+++ +++++ ++
  KHJ35489.1 310 FTNDFVS--QNTGLKSSPLNIVMKLNTAREKPAIKLSDNAAKHM-GDQTTIEKVKKLLG 365
                 ******9..***********************************.99999999998776 PP

>> NAPRTase_N  Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.0   1.6e-15   1.5e-11      51     125 .]       3      85 ..       1      85 [. 0.85

  Alignments for each domain:
  == domain 1  score: 44.8 bits;  conditional E-value: 1.6e-15
  NAPRTase_N  51 lenlrfteeeieyLkrklpyfkedfleyLrtfrfkpse.vavee...eev.....vfpgepeirveGpwieaillEtplLaivn 125
                 l nl+++ +e +yL++++p+++e++l++Lr +r++p+  +  +    +          g+++++v+G w+e+il+E+p+La+ +
  KHJ35489.1   3 LGNLSLSHNEFRYLQSTVPILSESYLNFLRGLRLNPRDqILCSFtpdD-DndfsdEALGTVDLKVKGLWVETILYEVPVLALTS 85 
                 89**********************************986555555552.244556667899*******************9875 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.48u 0.20s 00:00:00.68 Elapsed: 00:00:00.37
# Mc/sec: 3065.28
//
Query:       KHJ35490.1  [L=261]
Description: putative protein hob3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-64  217.9   2.3    1.8e-64  217.7   2.3    1.1  1  BAR       BAR domain
     0.0068   15.7   0.3      0.012   14.9   0.3    1.3  1  FAT       FAT domain
  ------ inclusion threshold ------
      0.066   14.0   0.0       0.27   12.0   0.0    2.1  2  CP12      CP12 domain
       0.11   13.1   0.5       0.94   10.0   0.1    2.4  2  DUF5610   Domain of unknown function (DUF5610)


Domain annotation for each model (and alignments):
>> BAR  BAR domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  217.7   2.3     4e-68   1.8e-64       1     238 [.       6     229 ..       6     230 .. 0.99

  Alignments for each domain:
  == domain 1  score: 217.7 bits;  conditional E-value: 4e-68
         BAR   1 lkKafnRasqlleekvgkaekTkLDedFeelerrldvteklieklvkelkeylqanpgarakqivleklkeqplelLaesmieagkelgedssfgkale 99 
                 +kK++nRa+ ++++k+g +ekT+ D+d+e +err++++e++  +l+ke+k+yl+++++++a+q+            +ae++  ++ + g +++   ++ 
  KHJ35490.1   6 FKKNVNRATTQVMMKTGYVEKTN-DRDYEVEERRYRTMETAALRLQKESKGYLDSLRAMTASQM-----------RIAETIDAFYGDSGAKDG---VSC 89 
                 89*********************.****************************************...........******************...999 PP

         BAR 100 kygeavkkl.aqteeelekrvetnfldplrellekefkeiqkerkklehkrlDyDaakarlkklktkkskkakdeekaeeelrkAqqkfeesneelkae 197
                  y++av++l a+t + l+++++t++l+p+ +++ ++f++i++++kk+++k+lDyDa +a++kkl +k +k++++ ++ae+e ++A++ +e++ne+l +e
  KHJ35490.1  90 GYKQAVEDLdAETIKALDGPYRTTVLEPISRFC-AYFPDINECIKKRNNKLLDYDAMRAKVKKLVEKPDKDVTKLPRAEKEAEVAKASYEQLNEQLFTE 187
                 9********99**********************.***************************************99************************ PP

         BAR 198 Lpnllalevefv.nqlqafveaqldfhkqaaqlleqlqqqls 238
                 Lp+l++l+v+++ ++++a+v++ql+f+++a+++++q+qq+l+
  KHJ35490.1 188 LPQLIDLRVPYLdPSFEALVKIQLRFCAEAYSRMAQVQQYLE 229
                 ***************************************986 PP

>> FAT  FAT domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.3   2.6e-06     0.012      13      97 ..     141     240 ..     137     254 .. 0.85

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 2.6e-06
                 SGHHCCCCT...............TSSSS--CCCHCCC.CHH--CCHCHHCCCHCCCCCCCCCTS---S...CCCCCHHHHHCCCCCHHHCHHCCHHCS CS
         FAT  13 qWdsmeeylsvlk...........kdspdkaffeaila.lhrnqfdeakeliekarqlldtelsalvge...synraygvlvrvQmlaEleeiiqykqk 96 
                 ++d m+ ++++l            + + + ++ +a +  l ++ f+e+ +li+     ld + +alv+    +   ay+ + +vQ++ E e   qy + 
  KHJ35490.1 141 DYDAMRAKVKKLVekpdkdvtklpRAEKEAEVAKASYEqLNEQLFTELPQLIDLRVPYLDPSFEALVKIqlrFCAEAYSRMAQVQQYLEPETREQYASG 239
                 7899999888888889899888889999999******9666688**********************99888899******************9999986 PP

                 S CS
         FAT  97 l 97 
                 +
  KHJ35490.1 240 Q 240
                 4 PP

>> CP12  CP12 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0     6e-05      0.27      19      66 ..      81     131 ..      67     133 .. 0.84
   2 ?   -3.5   0.1         4   1.8e+04       9      17 ..     167     175 ..     161     182 .. 0.52

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 6e-05
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-TTCHH...HHHHHSTTSTTT CS
        CP12  19 kgansaecaaawdeVeeLqaeaahqrakkkektsLe...eYCeenPeaaEc 66 
                 +ga+++    + ++Ve+L ae  ++ +   ++t Le   ++C  +P+  Ec
  KHJ35490.1  81 SGAKDGVSCGYKQAVEDLDAETIKALDGPYRTTVLEpisRFCAYFPDINEC 131
                 5667777777889***********999766789999888***********9 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 4
                 XXXXXXXXX CS
        CP12   9 ieearevca 17 
                  +ea+ ++a
  KHJ35490.1 167 EKEAEVAKA 175
                 334443333 PP

>> DUF5610  Domain of unknown function (DUF5610)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.0   0.1   0.00021      0.94      39      92 ..      41     100 ..       5     108 .. 0.67
   2 ?    0.2   0.0      0.23     1e+03      50      75 ..     223     252 ..     214     254 .. 0.62

  Alignments for each domain:
  == domain 1  score: 10.0 bits;  conditional E-value: 0.00021
                 ---HHHHHHHHHHHHHHHHT-TTS-HHHHHHHHHHH......HHHHHHHHHHHHHHHHHH CS
     DUF5610  39 sPeavAdrilsfvtgrlesakadgaseeklqslleq......arkGvekGfkeAreiLeg 92 
                 + e  A r  + ++g+l+s +a  as+ ++++ +++      a++Gv  G+k+A e+L++
  KHJ35490.1  41 TMETAALRLQKESKGYLDSLRAMTASQMRIAETIDAfygdsgAKDGVSCGYKQAVEDLDA 100
                 447778888888888888777777776666666655444455899*************86 PP

  == domain 2  score: 0.2 bits;  conditional E-value: 0.23
                 HHHHHHH....HT-TTS-HHHHHHHHHHHH CS
     DUF5610  50 fvtgrle....sakadgaseeklqslleqa 75 
                  v+++le    ++ a+g+ +++++++le +
  KHJ35490.1 223 QVQQYLEpetrEQYASGQLDTRVEQILEEI 252
                 677888854445555555555555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (261 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1120  (0.0624686); expected 358.6 (0.02)
Passed bias filter:                      669  (0.0373138); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.46u 0.25s 00:00:00.71 Elapsed: 00:00:00.39
# Mc/sec: 1993.60
//
Query:       KHJ35491.1  [L=534]
Description: putative n-acetylglucosamine-phosphate mutase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.4e-18   65.3   0.1    7.2e-10   38.7   0.0    3.3  4  PGM_PMM_I    Phosphoglucomutase/phosphomannomutase, alpha/bet
    3.2e-13   49.6   0.1    1.1e-12   47.9   0.1    2.0  1  PGM_PMM_IV   Phosphoglucomutase/phosphomannomutase, C-termina
    3.8e-06   27.1   0.0    8.7e-06   25.9   0.0    1.7  1  PGM_PMM_III  Phosphoglucomutase/phosphomannomutase, alpha/bet
     0.0027   18.3   0.0      0.012   16.2   0.0    2.2  2  PGM_PMM_II   Phosphoglucomutase/phosphomannomutase, alpha/bet


Domain annotation for each model (and alignments):
>> PGM_PMM_I  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.7   0.0   1.6e-13   7.2e-10      91     135 ..      55      99 ..      42     102 .. 0.82
   2 !   22.5   0.0   1.7e-08   7.5e-05      38      92 ..     118     172 ..      97     174 .. 0.87
   3 ?   -1.2   0.0      0.35   1.6e+03       8      38 ..     173     202 ..     169     209 .. 0.74
   4 ?   -1.5   0.0      0.43   1.9e+03      52      82 ..     322     353 ..     318     377 .. 0.76

  Alignments for each domain:
  == domain 1  score: 38.7 bits;  conditional E-value: 1.6e-13
                 ECEEEEE--TTS-TTCCCEEEEETTTCE--CHHHHHHHHHHCCT- CS
   PGM_PMM_I  91 adagimitaSHnppeyngiKvylsnGgpispeveekIeaiiekee 135
                  + gimitaSHnpp++ngiK+++++G  ++++ e + ++ +++++
  KHJ35491.1  55 QAIGIMITASHNPPDDNGIKLVDPRGEMLDRSWEVHATELANTKD 99 
                 5679*************************9998888888887776 PP

  == domain 2  score: 22.5 bits;  conditional E-value: 1.7e-08
                 STS-EEEEEE-S-TTHHHHHHHHHHHHHCCT-CEEEEEEB-HHHHHHHHHHCCEC CS
   PGM_PMM_I  38 akkkkvvvGrDtRvssrelaealaaglaanGvevillgllptPavsfairklkad 92 
                 +++++vv +rDtR s+  l ++l++ l a+ +e  +++ll+tP +++++r ++++
  KHJ35491.1 118 TNRARVVYARDTRMSGIRLVKILVESLQAAEAEYTDYKLLTTPQLHYITRCINME 172
                 57899********************************************988765 PP

  == domain 3  score: -1.2 bits;  conditional E-value: 0.35
                 CEEEECCHCTBSCCHHHHHHHHHHHHCHHCS CS
   PGM_PMM_I   8 GlRgkvgegeltpelveklgqaiaeylkaea 38 
                 G  +++g ++ ++ + +kl++a+a+++k ++
  KHJ35491.1 173 GTEQSYG-EPSEKGYYQKLSEAFARAIKDKK 202
                 5666667.446889999********999873 PP

  == domain 4  score: -1.5 bits;  conditional E-value: 0.43
                 THHHHHHHHHHHHHCCT-CEEEEE.EB-HHHH CS
   PGM_PMM_I  52 ssrelaealaaglaanGvevillg.llptPav 82 
                  s+el+  +++ + anG+++  ++  l  P+v
  KHJ35491.1 322 LSDELQIGVVQTAYANGASTRYIEqALRLPVV 353
                 47888888999999999999999986666665 PP

>> PGM_PMM_IV  Phosphoglucomutase/phosphomannomutase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.9   0.1   2.4e-16   1.1e-12       1      72 [.     456     531 ..     456     533 .. 0.85

  Alignments for each domain:
  == domain 1  score: 47.9 bits;  conditional E-value: 2.4e-16
                 CCCCCHCC-TT.......EECCCCCTTHHCCCCCCCCGCCEEEE.EEEETTCCEEEEEEEESSHHHHHHHHHHHHHH CS
  PGM_PMM_IV   1 linvrveekak.....vvaalaallkvasikeglkilledGrrlavRpSGTepllrvyvEaksdeelarlaeevael 72 
                 l++v v + +k     + ++l + ++ ++ ++ l+ ++++Gr +  RpSGTe+ lrvy+Ea +++e+++la +va l
  KHJ35491.1 456 LVRVDVSDRNKfkttdAERRLIEPYGLQDDIDNLVKKYQNGRAF-ARPSGTENILRVYAEAATRSEADDLASKVALL 531
                 5677777774444445567788888888****************.**************************999876 PP

>> PGM_PMM_III  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.9   0.0   1.9e-09   8.7e-06       1      77 [.     301     384 ..     301     445 .. 0.82

  Alignments for each domain:
  == domain 1  score: 25.9 bits;  conditional E-value: 1.9e-09
                  HHHHHHHHHHHHHHCH....CSTTT.....CEEEEETTS-THHHHHHHH.TT-EEEEESSSCHHHHHHHHHTTECEEEETTCEEEET CS
  PGM_PMM_III   1 dgdqllallakyllee....klkpg.....agvvktvmtslalervakk.lgiklvetkvGdkyvleemkeegavlGgEeSghiifl 77 
                  dgd+++ l+a  l+e     +          gvv+t   + a  r++++ l +++v t++G k++ ++  + ++ + +E +gh+ +l
   KHJ35491.1 301 DGDKIATLCASFLCEVlkdaR---LsdelqIGVVQTAYANGASTRYIEQaLRLPVVCTPTGVKWLHQAASKFDFGIYFEANGHGTIL 384
                  79***********99654443...05567558*************99864899****************************998766 PP

>> PGM_PMM_II  Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.2   0.0   2.6e-06     0.012       2      98 ..     185     288 ..     184     295 .. 0.78
   2 ?   -4.0   0.0         4   1.8e+04      27      41 ..     335     349 ..     330     350 .. 0.81

  Alignments for each domain:
  == domain 1  score: 16.2 bits;  conditional E-value: 2.6e-06
                 HHHHHGGGTS-HHHHHHHT-E..EEEE-TT-TTHHHHHHHHHHTT-..EEEES-----TT-TTSS----TT-TTTTHHHHGGGG....G-SEEEEE-TT CS
  PGM_PMM_II   2 aYiealkekvdseaikksglk..vvidplhGaggeilkellkelgv..dvvelnaepdpdfptkapnpeekealkllielvkke....gadlglafDgD 92 
                  Y ++l e++  +aik ++++  + +d+++G gg  l e+ k l+   d  e++ + d     +  n e+ +++ +  + + k+    + + +++fDgD
  KHJ35491.1 185 GYYQKLSEAFA-RAIKDKKVRgaLTVDCANGIGGPKLAEMKKYLQKitDKLEIRITNDDVIKPEILNFECGADFVKSRQRAPKYprieDKERCCSFDGD 282
                 59999999997.677777777779***************999999955555566666666665888888866777777766666777699********* PP

                 S-BEEE CS
  PGM_PMM_II  93 aDRlgv 98 
                 aDRl+ 
  KHJ35491.1 283 ADRLIY 288
                 ***986 PP

  == domain 2  score: -4.0 bits;  conditional E-value: 4
                 -TT-TTHHHHHHHHH CS
  PGM_PMM_II  27 plhGaggeilkellk 41 
                 +++Ga+  +++++l+
  KHJ35491.1 335 YANGASTRYIEQALR 349
                 679999999999986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (534 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       609  (0.0339673); expected 358.6 (0.02)
Passed bias filter:                      566  (0.031569); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.42
# Mc/sec: 3806.66
//
Query:       KHJ35492.1  [L=347]
Description: putative urea transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (347 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       871  (0.0485805); expected 358.6 (0.02)
Passed bias filter:                      283  (0.0157845); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.47u 0.29s 00:00:00.76 Elapsed: 00:00:00.43
# Mc/sec: 2418.75
//
Query:       KHJ35493.1  [L=521]
Description: putative folic acid synthesis protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-73  247.7   0.0      2e-73  247.1   0.0    1.3  1  Pterin_bind  Pterin binding enzyme
    3.6e-37  127.3   0.0    9.3e-37  126.0   0.0    1.7  2  HPPK         7,8-dihydro-6-hydroxymethylpterin-pyrophosphokin


Domain annotation for each model (and alignments):
>> Pterin_bind  Pterin binding enzyme
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.1   0.0   2.2e-77     2e-73       1     244 []     247     503 ..     247     503 .. 0.94

  Alignments for each domain:
  == domain 1  score: 247.1 bits;  conditional E-value: 2.2e-77
                  EEEEETTTTTCHCCHHC...THHHHHHHHHHHHHHTT-SEEEEESS-TSTT--CCHHHHHHHHHHHHHHHHHH......HC.TSEEEEE-S-HHHHHH CS
  Pterin_bind   1 mgilNvtpdsfsdggkf...edldkalaqarkmveeGAdilDiggestrPgaervdeeeelervvpvlealrd......ea.dvpisiDttkaevaea 88 
                  m+i N+tpdsfsdg k    ++ ++++++++  +++GA+i+Digg+s+rP a++++ eee++r++p +   ++      +a +  is+Dt++a+vaea
   KHJ35493.1 247 MAIFNLTPDSFSDGRKNsqpLSNQEIINRIQVYLNDGASIIDIGGQSSRPFAKEISFEEEINRIAPAIHLAQHqkkidsKAtNFAISVDTYRAKVAEA 344
                  89***********987753457799******************************************97433333333366688************** PP

                  HHHTTSEEEEETTTTSSSTTHHHHHHHHT-EEEEESECSSTTTHCCCCCCCSSHHHHHHHHHHHHHHHHHHTT--GGGEEEETTTTSSTTHHHHHHHH CS
  Pterin_bind  89 AlkagadivNdvsgeerdpkmlelvaeagaavvvmhmrgtpktmqeeegqyedvveeveaflearveaaeeaGvaperillDpgigfgkteehnlell 186
                  A+++gadi+Nd+s+++ dp+ml+++a+ g +v++ hmrgtp tm++ + + e ++  ++++l +rveaa++aG++++ri+lDpgigf+k+ ++nlell
   KHJ35493.1 345 AVRSGADIINDISAGRLDPEMLPTMARLGKTVCLTHMRGTPSTMTNLSQYPEGLIPTIAKELIERVEAAQAAGIRRWRIILDPGIGFAKNLKQNLELL 442
                  ************************************************999*********************************************** PP

                  HTHHHHHHTTS...SEBEEEGTTGHHHHHHHCTTCHGHHHHHHHHHHHHHHHTT-SEEEES CS
  Pterin_bind 187 rrldelreale...vpvllGvSrksflgrllelgkaeeRdagtaaflalaaaaGadivrVh 244
                  rrl+el+   e   +p+++G Srksf+g ++ ++k+ eR +gt+a++++a+  GadivrVh
   KHJ35493.1 443 RRLNELKDWPElqgFPWMIGSSRKSFIGTITGVEKPVERIWGTSATVTAAISGGADIVRVH 503
                  ******98777888****************99899*************************9 PP

>> HPPK  7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  126.0   0.0     1e-40   9.3e-37       1     112 []      70     197 ..      70     197 .. 0.95
   2 ?   -3.6   0.0       1.8   1.6e+04      33      47 ..     202     217 ..     200     228 .. 0.69

  Alignments for each domain:
  == domain 1  score: 126.0 bits;  conditional E-value: 1e-40
                 EEEEEE-SSSHHHHHHHHHHHHHH...EEEEE---EEE--S...SS-GEEEEEEEEEESS-HHHHHHHHHHHHHHTT--C..STS-BS-EEEEEEET.. CS
        HPPK   1 ylalGsNlgdreanleealealee...kvvkvSslyetepv...dqpdFlNavvevetelspeellealkeiEkelgrer..rwgpRtlDlDillyg.. 89 
                 y++lGsN+g+r + +eea+++++e   ++ ++Ssl+et+p+   +q++F+N v+evete++p +ll++l++iEkelgr++  ++gpR++DlDillyg  
  KHJ35493.1  70 YISLGSNIGNRIKWIEEACNRISErgiRIRRTSSLWETKPMyvlEQENFINGVIEVETEFQPLDLLDQLQNIEKELGRTKiiDKGPRNIDLDILLYGne 168
                 89********************88677778***********99889*********************************87669*************** PP

                 ......EEES-TTGGG-HHHHHHHHHHCT CS
        HPPK  90 ......ltlPhprlaeraFvlvplaelap 112
                       l++Php ++er+Fvl+pl el p
  KHJ35493.1 169 tvhherLQIPHPGITEREFVLRPLSELIP 197
                 *************************9975 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 1.8
                 EEE--SS.S-GEEEEE CS
        HPPK  33 yetepvd.qpdFlNav 47 
                 + ++p++ ++d+lN  
  KHJ35493.1 202 FISSPWKfTQDYLNRL 217
                 6688995456799965 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (521 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       525  (0.0292822); expected 358.6 (0.02)
Passed bias filter:                      479  (0.0267165); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.55u 0.24s 00:00:00.79 Elapsed: 00:00:00.40
# Mc/sec: 3920.66
//
Query:       KHJ35494.1  [L=361]
Description: putative hydroxymethylglutaryl- lyase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    1.8e-38  132.6   0.0    6.1e-38  130.9   0.0    1.7  1  HMGL-like  HMGL-like


Domain annotation for each model (and alignments):
>> HMGL-like  HMGL-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.9   0.0   3.4e-42   6.1e-38       2     262 ..      42     338 ..      41     339 .. 0.88

  Alignments for each domain:
  == domain 1  score: 130.9 bits;  conditional E-value: 3.4e-42
                 -EEEE-TTTHHHHTSSS---HHHHHHHHHHHHHHT-SEE--.......TSGGGT.THHHHHHHS---TT-B.........--EE-SSHHHHHHHHH... CS
   HMGL-like   2 vkivdttLRDGeqalkaalsveeklaiakaLdeagvdeiEv.......gfpaaseddfevvraiakavkkar.......ilalvrarekdikaavealk 86 
                 vki+d+++RDG q++ + + ++ kl++++ L+  g+++iE+       ++p++ e d + ++ i ++  + +        ++ + ++ + ++a  ++l+
  KHJ35494.1  42 VKITDVSPRDGLQNESKMIPLKMKLELIERLASTGIRSIECgsfvspkWVPQMAESD-QILKHILQEKWNDDdkdttcpTYSFLVPNSHGFNALRDQLQ 139
                 79****************************************************555.66666666655553467788867777777777777666554 PP

                 .......TT-SE.....EEEEEES-HHHHHHHHSSTHHHHHHHHHHHHHHHHHTT-E......TTT-BTTTBS--HHHHHHHHHHHHHHT-SEEEEEET CS
   HMGL-like  87 g......agakr.....vhvfiatselhlkaklkkdreevakkaeeavkaarslgkd......velsledasrtdleflaevveaaeeaGatriniaDt 168
                        + a++     v++f++++e + +++l+++++e++++a+ +v+aa  ++ +      v+l++++++   + ++a ++ +++e+G+  i++ Dt
  KHJ35494.1 140 AykpsstTIARSippigVNIFLSATESFSQKNLNCSIKESIERARLVVNAALVANLQvrayisVVLGCPYEGYVVPSNVASLAIELIEMGVSDIALGDT 238
                 3111111333323444489*********************************9999999**************************************** PP

                 TS---HHHHHHHHHHHHHHS-.GGGEEEEEB-TTS-HHHHHHHHHHTT--EEEEBTTS--......SSBBB-BHHHHHHHHHHTT-B----HHHHHHHH CS
   HMGL-like 169 vGvltPneaaelisalkervkdkvilsvHcHndlGlAvantlaAveaGadrvdgtvnGlG......eraGnaaleelvaalealgvdtgldlqklrsia 261
                  G+ t  +  +l+++l +    + il +H H+++G+ +an+++++e G+   dg+v GlG      +++Gn+ +e+lv+  + lg++t +dl++l ++ 
  KHJ35494.1 239 TGMGTKPNTLKLLKTLEAAGISNKILTMHLHDTYGMSIANMILGLEHGIHSFDGSVGGLGgcpyspGATGNVGTEDLVYLCNSLGLETLIDLESLVQVG 337
                 ****************99877799***********************************************************************9986 PP

                 H CS
   HMGL-like 262 a 262
                 +
  KHJ35494.1 338 Q 338
                 5 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (361 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       321  (0.017904); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.25s 00:00:00.74 Elapsed: 00:00:00.43
# Mc/sec: 2540.53
//
Query:       KHJ35495.1  [L=73]
Description: putative virulence effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
       0.12   12.4   0.1       0.17   12.0   0.1    1.1  1  Cyc-maltodext_C  Cyclo-malto-dextrinase C-terminal domain


Domain annotation for each model (and alignments):
>> Cyc-maltodext_C  Cyclo-malto-dextrinase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.1   9.3e-06      0.17      38      74 ..      21      57 ..      18      58 .. 0.92

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 9.3e-06
  Cyc-maltodext_C 38 nryaevlngkkkatdiltgkevslsetltlapksalv 74
                     + +a+++++k++ + +l+ + + + +++t++p s lv
       KHJ35495.1 21 TGFAMITKDKETRKLLLDKSSIISAQNVTIEPASDLV 57
                     569*****************************99887 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (73 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       358  (0.0199677); expected 358.6 (0.02)
Passed bias filter:                      299  (0.0166769); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.42
# Mc/sec: 518.48
//
Query:       KHJ35496.1  [L=767]
Description: putative peptidase s41 family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.3e-06   26.8   0.0    1.1e-05   25.0   0.0    1.8  1  Peptidase_S41  Peptidase family S41
  ------ inclusion threshold ------
       0.08   13.0   0.0       0.22   11.6   0.0    1.7  1  Bromodomain    Bromodomain


Domain annotation for each model (and alignments):
>> Peptidase_S41  Peptidase family S41
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   0.0   1.3e-09   1.1e-05       1     116 [.     388     595 ..     388     615 .. 0.81

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 1.3e-09
                    EEEEEEES-BCC....THHHHHHHHHHHHHHTTSSEEEEE-TTB-EBEHHHHHHHHHCCSSSSEEEEEECTTSEEE.................... CS
  Peptidase_S41   1 kiGyiripsfse....ktkeelakalkelkkknvkglilDlRnNgGGlldeavelaslflddglivstrgrdgkkk.................... 72 
                    +++++ + +f++    + ++ ++++++  k+++ k+l +Dl++NgGGl+   +++ + ++++ l     + + +++                    
     KHJ35496.1 388 DVAVLSVLTFESqsppEYQKVVENFFAYAKRDGKKKLLIDLSQNGGGLIFLGYDMFRQLFPGILQDGNSRWRANENfkaiaeifsdlsrdfdpnts 483
                    58999999**336898899999999999999*****************************9666555444444444778999*****999999999 PP

                    ...................................................................EEEHTCSS-S.........TT-BSSEEEE CS
  Peptidase_S41  73 ...................................................................kksktekase.........evqykgplvv 92 
                                                                                       +        +         +     ++++
     KHJ35496.1 484 dsqtlvvqanlpfnfredlnisdepfktfdskfgpfefkndeftnlmrwnlsdpiltknstfgigtdV--------TgygsrqnftQPFAPENIIL 571
                    99999999999999999999999999999999988888888888888777777777666666655551........04444444456788999*** PP

                    EE-TTBBTHHHHHHHHHHHTTSEE CS
  Peptidase_S41  93 LvnegsaSaseifagalkdngrat 116
                    L ++ +aS   if++++++ g ++
     KHJ35496.1 572 LYDGICASTCTIFSQFMRELGGVK 595
                    ******************998665 PP

>> Bromodomain  Bromodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.6   0.0   2.4e-05      0.22      39      69 ..     158     188 ..     157     191 .. 0.92

  Alignments for each domain:
  == domain 1  score: 11.6 bits;  conditional E-value: 2.4e-05
                  HHHHHHHHHTT--SSHHHHHHHHHHHHHHHH CS
  Bromodomain  39 LstIkkklesnkYksladfeadlkllfsNar 69 
                  L+ +kk+le+ kY++ ++f+ dl  +f+ a+
   KHJ35496.1 158 LASVKKNLEEDKYSNEHEFQTDLYSVFTPAH 188
                  7889**********************99775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (767 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       346  (0.0192983); expected 358.6 (0.02)
Passed bias filter:                      309  (0.0172346); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.60u 0.21s 00:00:00.81 Elapsed: 00:00:00.37
# Mc/sec: 6150.48
//
Query:       KHJ35497.1  [L=262]
Description: hypothetical protein EV44_g5785 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.9e-12   46.1   3.8    8.7e-12   45.5   3.8    1.4  1  DUF4602   Domain of unknown function (DUF4602)


Domain annotation for each model (and alignments):
>> DUF4602  Domain of unknown function (DUF4602)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.5   3.8   4.9e-16   8.7e-12      14     133 ..      98     222 ..      35     224 .. 0.85

  Alignments for each domain:
  == domain 1  score: 45.5 bits;  conditional E-value: 4.9e-16
     DUF4602  14 skrakrslsskkksrkkkkaeeeeeenlrqefdLkkarkevhrfgis...glskkerkkaekerlikLGAKpp..knpyinykelkgekkkakareeee 107
                 sk + + lss  +++ +++++ +e en ++++ L++ + e+h+f +    +ls+ +r+ka + rl++LG K+   +++++++ ++kg+  k k  e ++
  KHJ35497.1  98 SKPPTQGLSSTPRKDIQDNDDPTEVENIKNDIVLHRFLSESHLFESAknpTLSGNNRHKAMDLRLQALGSKKSilRQQNMPMTHRKGILAKHKSIEFKR 196
                 33344445555577888899999*********************7642227889******************9999*********************** PP

     DUF4602 108 kaeareagvvtkkkkkkkkkkkrkkk 133
                 ++ a e+g++ +k +  ++k+ rk+ 
  KHJ35497.1 197 RKNAIENGIILEKVSMENNKTIRKRH 222
                 ***************99999999975 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (262 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       691  (0.0385409); expected 358.6 (0.02)
Passed bias filter:                      359  (0.0200234); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.41
# Mc/sec: 1941.17
//
Query:       KHJ35498.1  [L=434]
Description: putative subtilisin-like protease [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.9e-30  104.5  13.1    1.3e-29  103.4  13.1    1.4  1  Peptidase_S8  Subtilase family


Domain annotation for each model (and alignments):
>> Peptidase_S8  Subtilase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  103.4  13.1   7.5e-34   1.3e-29       2     285 ..     178     413 ..     177     425 .. 0.79

  Alignments for each domain:
  == domain 1  score: 103.4 bits;  conditional E-value: 7.5e-34
                   TT-EEEEECS-B-TT-TTTGGGEEE..EEEE---TTSG.GGEETT-SS-TT-SC-SSS....HHHHHHHHHH-B..SSSSSB-SSTTSEEEEEE-SS CS
                   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8   2 kgvlvavlDtGvdpshpdlsvttdgerklvdvideegagfngadsettstnwarddngnsieHGthvAGiaaanapeegekngvapgakilsvkvld 98 
                   kg++  v+DtG+ ++h+d                      + +   +  +++++d+ng    HG+hvAG++a++      + gva +a+i +vkvld
    KHJ35498.1 178 KGTVGYVVDTGIRTTHKDYG-------------------GRARMGANFVNDINTDENG----HGSHVAGTMAGT------FFGVAKKAEIVGVKVLD 245
                   55666688999988888855...................3344445556667777888....************......9**************** PP

                   TTSB-HH..HHHHHHHHHHHHCT-S........EEEE-EESCETTCHHCHHHHHHHHHHHH.CCT-EEEEE--SS-T-HHEEE-TTCEECTTTSTTC CS
                   xxxxxxxxxxxxxxxxxxxxxxxxx........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Peptidase_S8  99 tsggsmetgteliraieeaaedkvd........vinmslgestslpktgrsiealainravnkkgvlvviSaGNngktgsslqagspvgtpstsknv 187
                   ++g+  +  + ++++i+ +a  +v+        v+n+s+g++ s   +       a+++ + + gv+vv++aGN++        +++  +p++++ +
    KHJ35498.1 246 KNGSGTN--ALVLQGIQHVAA-DVKkrglagkaVMNISIGGAKSAALNA------AVEEIT-RDGVVVVVAAGNSN-------INAQSVSPASANAA 325
                   **98764..677777777777.33346899**********444443333......788888.89************.......7888999******* PP

                   EEEEEES.TTSSB-TT--B-TT.......-EEEE-S-CCCCCCCCCHHHTTTHHEEEE-SHHHCHHHHHHHHHHHHHHHTT.--HHHHHHHHHCCS- CS
                   xxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxx RF
  Peptidase_S8 188 itvgayt.tegkiapfSsrGpssdgklkpdivapGgnivstwsrqsnnsaglssyqsmsGTSmAsPnaagaaAlllsalpk.ltpetvraallntAq 282
                   itvga++   ++ a fS+ G ++      di apG++ v++++ ++ n+     ++  +GTSmAsP++ag a  ++s+ p+  tp++v a +l  A+
    KHJ35498.1 326 ITVGAIDaATDQKAKFSNFGQKI------DIFAPGVK-VESVGIKDDNA-----VKVLNGTSMASPHIAGLALSIISKEPElNTPQKVIARMLEMAR 410
                   *******6567789*******88......6*******.66666666444.....889************************8899998888888887 PP

                   EE. CS
                   xxx RF
  Peptidase_S8 283 dlg 285
                    + 
    KHJ35498.1 411 STD 413
                   662 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (434 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       435  (0.0242624); expected 358.6 (0.02)
Passed bias filter:                      268  (0.0149478); expected 358.6 (0.02)
Passed Vit filter:                        12  (0.000669307); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.49u 0.26s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 3091.68
//
Query:       KHJ35499.1  [L=127]
Description: putative riboflavin aldehydeforming [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-07   30.5   0.1    4.8e-07   30.0   0.1    1.3  1  DPBB_1    Lytic transglycolase


Domain annotation for each model (and alignments):
>> DPBB_1  Lytic transglycolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.1   2.7e-11   4.8e-07       5      80 ..      34     119 ..      30     124 .. 0.82

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 2.7e-11
                 EEEE-CCC.-TTSSB--TTS-EEE-SSS.....-TT-EEEE..TT..--EEEEEEEE----STTECEEE-HHHHHHHT-TTTS-EE CS
      DPBB_1   5 saslykdg.tacGecyevkcltaahktl.....plgtycrv..ls..gksvtVtitDrgpfppgrhiDLSkaAfeklakpraGvip 80 
                 +a++y+ g  acG + +  +++ a ++      +++t+ +    +  g  ++ t++D++  ++g  iD S+aAf++l+  + G  +
  KHJ35499.1  34 QATWYNTGlGACGTNSNDDQMVVALPAPiananCFKTVTLAnaARpvGPIIVATVVDKCMGCSGMDIDISPAAFKALNLGDLGSGR 119
                 79***9999********999999988877888877775555763357788888***********************9988666554 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (127 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       460  (0.0256568); expected 358.6 (0.02)
Passed bias filter:                      336  (0.0187406); expected 358.6 (0.02)
Passed Vit filter:                        17  (0.000948185); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.28s 00:00:00.67 Elapsed: 00:00:00.43
# Mc/sec: 894.48
//
Query:       KHJ35500.1  [L=584]
Description: putative yl1 nuclear protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-55  188.0  22.1    2.9e-55  188.0  22.1    2.5  3  YL1       YL1 nuclear protein
    1.8e-13   50.0   2.8    3.9e-13   48.9   2.8    1.6  1  YL1_C     YL1 nuclear protein C-terminal domain


Domain annotation for each model (and alignments):
>> YL1  YL1 nuclear protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -5.2   2.9         2   1.8e+04      60      72 ..      18      29 ..       3      34 .. 0.36
   2 !  188.0  22.1   3.3e-59   2.9e-55       1     244 []      41     271 ..      41     271 .. 0.86
   3 ?    0.5   1.5     0.062   5.5e+02      60      83 ..     305     325 ..     297     385 .. 0.47

  Alignments for each domain:
  == domain 1  score: -5.2 bits;  conditional E-value: 2
                xx.xxxxxxxxxxx RF
         YL1 60 ee.sdeeedeeege 72
                ++ +++e+d+  +e
  KHJ35500.1 18 NDgEESEKDD--NE 29
                1111222222..22 PP

  == domain 2  score: 188.0 bits;  conditional E-value: 3.3e-59
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         YL1   1 RarRstAGnrlkkLleqeeeedelellFaEeedDeefeseeeeeeeensDsdfdsdeedee.sdeeedeeegekelerqerkkrkkekkkrkaqkkksk 98 
                 Ra+RstAGn l++Ll+q+e++del l+FaE+edD +f + e +    +sD+ +ds++++e+ ++e  +++egekel++  +++r    + +k+   + k
  KHJ35500.1  41 RAKRSTAGNLLHTLLQQQEHDDELGLIFAEDEDDSGFLDMEAD----QSDIPMDSSSDEEDkGSELGNDLEGEKELQKSLKEARM---RSKKNG--IGK 130
                 9************************************988664....39*****999999986777788***************3...333322..333 PP

                 xxxxxxxxxxxxxxxx.xxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         YL1  99 kkkkkqkkkkkkkidp.qak.eprpkkkseraswlpaeslltpkrRkssRastvenkeqleerlkereerrkkilermrkkaarkkkkkkerplTQeer 195
                 +k       kk+ ++  +++ +++pkkkser+sw+  + + +p  R+ssR++t+++k+ql+ ++ +re +r k+l+  +k aa k +k+  + lTQe+r
  KHJ35500.1 131 YKII-----KKTPFESvSSHsAQQPKKKSERTSWILNSIE-APV-RASSRQTTRQSKQQLQVQMMDREIKRLKQLANVEKTAAAKVAKEA-PLLTQEDR 221
                 3332.....222222223333569***********99555.666.*******************************99999999777665.9******* PP

                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxx RF
         YL1 196 LaeAketEeeNlksLnryeeqEeekkkeqraklaalkrrkl.gpvirflS 244
                 L+eA+++E++N+ksL+r+e++E e+++eqr +l+ l++r l gpvi+++S
  KHJ35500.1 222 LREAARVEKANAKSLSRWERAEREREEEQRLRLNNLHNRHLeGPVITIWS 271
                 *************************************************9 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.062
                 xxxxxxxxxxxxxxxxxxxxxxxx RF
         YL1  60 eesdeeedeeegekelerqerkkr 83 
                 ee++++ed+eegek  e      +
  KHJ35500.1 305 EEDNDKEDQEEGEKSPE---SIPN 325
                 23345566667777433...3333 PP

>> YL1_C  YL1 nuclear protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.9   2.8   4.3e-17   3.9e-13       2      28 ..     517     543 ..     517     544 .. 0.97

  Alignments for each domain:
  == domain 1  score: 48.9 bits;  conditional E-value: 4.3e-17
       YL1_C   2 CdITGlpAkYrDPkTgLpYanveaykv 28 
                 C+IT+ pAkY+DPkTgL+Y+n++ayk+
  KHJ35500.1 517 CAITNYPAKYKDPKTGLYYSNLYAYKQ 543
                 **************************7 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (584 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1412  (0.0787551); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.56u 0.27s 00:00:00.83 Elapsed: 00:00:00.41
# Mc/sec: 4244.37
//
Query:       KHJ35501.1  [L=329]
Description: putative saga complex component [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.5e-29  100.5   0.0    1.3e-28   99.8   0.0    1.4  1  DUF1325     SGF29 tudor-like domain
  ------ inclusion threshold ------
      0.039   14.0   0.6      0.088   12.8   0.6    1.6  1  NHase_beta  Nitrile hydratase beta subunit
       0.15   11.9   0.0       0.53   10.2   0.0    1.9  2  Tudor_3     DNA repair protein Crb2 Tudor domain


Domain annotation for each model (and alignments):
>> DUF1325  SGF29 tudor-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.8   0.0   2.1e-32   1.3e-28       2     131 ..     194     327 ..     193     328 .. 0.90

  Alignments for each domain:
  == domain 1  score: 99.8 bits;  conditional E-value: 2.1e-32
     DUF1325   2 geeVaakekk......kekeeeeewilaeVvk..iegkknrYeveDad..pdeekekkkyklsaksiiplpkskakpesklaefpkgkkVLAlYPeTTt 90 
                 g++Va+++k+      ++ +ee ewi+++V k  +egk++rYev+D+   p+++++++ yk sa++++p+p + ++    l+ ++ gk+VLAlYP+T+ 
  KHJ35501.1 194 GDKVAFRRKQqvthpdGKVTEELEWIQGKVNKviGEGKSRRYEVRDPYytPESNDGPEFYKSSASQMVPIPVEGSN----LEVYEVGKRVLALYPDTSQ 288
                 89****76666888877778888**********99************95556699999*****************9....89***************** PP

     DUF1325  91 FYkAeVvaspkkkekeyklkFeddeeedkereVerrlVvel 131
                 FY+AeV+++  +  ++++l Fed+ e   +++Verr+ +++
  KHJ35501.1 289 FYRAEVKGTL-NGGTHVQLLFEDELEG-ILKTVERRFTLDH 327
                 ********87.7999*********998.5999****98875 PP

>> NHase_beta  Nitrile hydratase beta subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.6   1.5e-05     0.088      87     149 ..     147     207 ..     142     231 .. 0.82

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 1.5e-05
  NHase_beta  87 teeeldartaevlaesaeakpaaaeqvaavlakgdsakreaaaepkFavGdaVrvrnlspagh 149
                 +++e+++ ++   +++++++p++a++v+     ++s++r  +a+  +avGd+V  r+ ++++h
  KHJ35501.1 147 SPAEVRQVRKLASSRNNSQTPKVADDVKSFT--SESNERMPKAKVLYAVGDKVAFRRKQQVTH 207
                 6788888888888888899999999999876..56788899999*************999999 PP

>> Tudor_3  DNA repair protein Crb2 Tudor domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.92   5.5e+03      23      35 ..     228     238 ..     224     238 .. 0.66
   2 ?   10.2   0.0   8.8e-05      0.53       3      39 ..     277     311 ..     275     319 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.92
                 EEEE-SSSEEEEE CS
     Tudor_3  23 gvsssgsqrykVr 35 
                 g+ +s+  ry+Vr
  KHJ35501.1 228 GEGKSR--RYEVR 238
                 555555..99997 PP

  == domain 2  score: 10.2 bits;  conditional E-value: 8.8e-05
                 GEEEEE-SSSS--EEEEEEEEEEE-SSSEEEEEETTS CS
     Tudor_3   3 nrVfAlfkGkkraYYPAtclgvsssgsqrykVrFdDg 39 
                 +rV+Al+++ ++ +Y A + g+ ++g+  ++  F+D 
  KHJ35501.1 277 KRVLALYPD-TSQFYRAEVKGTLNGGT-HVQLLFEDE 311
                 7*******5.***************98.999999996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (329 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       600  (0.0334653); expected 358.6 (0.02)
Passed bias filter:                      471  (0.0262703); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.42
# Mc/sec: 2325.22
//
Query:       KHJ35502.1  [L=367]
Description: putative developmentally regulated gtp-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-39  134.5   0.3    4.4e-39  132.8   0.3    1.9  2  MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain
    5.2e-22   77.7   0.0    1.1e-21   76.6   0.0    1.6  1  TGS           TGS domain
    2.8e-21   75.7   0.1    9.1e-21   74.1   0.0    1.8  2  MMR_HSR1      50S ribosome-binding GTPase
    2.8e-09   36.7   0.1    1.3e-08   34.5   0.0    2.0  2  FeoB_N        Ferrous iron transport protein B
    0.00099   19.2   0.1        0.2   11.7   0.0    2.3  2  Dynamin_N     Dynamin family
     0.0011   18.5   0.1        8.3    5.9   0.0    3.8  3  GTP_EFTU      Elongation factor Tu GTP binding domain
     0.0095   14.9   0.1      0.018   14.0   0.1    1.5  1  MeaB          Methylmalonyl Co-A mutase-associated GTPase Mea
  ------ inclusion threshold ------
       0.04   13.4   0.2        2.9    7.3   0.0    2.3  2  Arf           ADP-ribosylation factor family
        0.1   13.1   0.0       0.22   12.1   0.0    1.6  1  Chlam_PMP     Chlamydia polymorphic membrane protein (Chlamyd
        0.2   11.6   1.3        3.7    7.4   0.1    2.8  3  RsgA_GTPase   RsgA GTPase


Domain annotation for each model (and alignments):
>> MMR_HSR1_Xtn  C-terminal region of MMR_HSR1 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.8   0.3   2.5e-42   4.4e-39       1     106 []     185     291 ..     185     291 .. 0.98
   2 ?   -2.5   0.0       2.9   5.2e+03      36      51 ..     312     327 ..     308     330 .. 0.74

  Alignments for each domain:
  == domain 1  score: 132.8 bits;  conditional E-value: 2.5e-42
  MMR_HSR1_Xtn   1 kgGikitstvkltkldeetvkkilkeykihnaevliredvtvDdlidvieg.nrvYipclyvlNKiDlisleeldelarepnsvviSaekelnldeL 96 
                   kgGi it+tv+lt++d++++++++ eyki +a++ ir+d+t+Ddlidv+e  +r Yip++y+lNKiD+is+eeld l+r pn+++iS+e+++n+deL
    KHJ35502.1 185 KGGIAITNTVPLTHIDHDEIRAVMGEYKISSADIAIRCDATIDDLIDVLEAkSRAYIPVIYALNKIDAISIEELDLLYRIPNACPISSEHGWNIDEL 281
                   69***********************************************6549******************************************** PP

  MMR_HSR1_Xtn  97 kekiweeLnL 106
                   +e +we+LnL
    KHJ35502.1 282 LEIMWEKLNL 291
                   ********98 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 2.9
  MMR_HSR1_Xtn  36 iredvtvDdlidvieg 51 
                     +++tv+d+ + i +
    KHJ35502.1 312 RSSKCTVEDFCNSIHK 327
                   3478999999999876 PP

>> TGS  TGS domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.6   0.0   6.1e-25   1.1e-21       1      60 []     292     366 ..     292     366 .. 0.98

  Alignments for each domain:
  == domain 1  score: 76.6 bits;  conditional E-value: 6.1e-25
                 EEEEE.TTSSEEE......EETTB-.HHHHHHHHSTTHHHHEEEEEECS.......EEEETTSBB-SSEEEEEEE CS
         TGS   1 irvyt.PdGkvpd......lprgat.veDfAykIhrslakkfiyAlVnG.......qrvgldhvLedgdvveIvt 60 
                 +rvyt P+G +p+      l++ ++ veDf+++Ih+sl++ f++A+V+G       +rvgl+hvL d+d+++I++
  KHJ35502.1 292 VRVYTkPKGIQPNfdepvvLRSSKCtVEDFCNSIHKSLIEGFKVAIVWGrsvrhqgMRVGLNHVLADEDIITIIK 366
                 79**********************99***********************************************97 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.1   0.0   5.1e-24   9.1e-21       2     114 .]      66     182 ..      65     182 .. 0.83
   2 ?   -1.8   0.0       1.8   3.2e+03      90     114 .]     226     249 ..     189     249 .. 0.63

  Alignments for each domain:
  == domain 1  score: 74.1 bits;  conditional E-value: 5.1e-24
                 EEEEESTTSSHHHHHHHHHTSTEEESSSTTSSSSEEEEEEEETTEEEEEEECGGCSSHHHHHHHHHHHHHHHHC.TSEEEEEEETTTTCSHHHHHHHHH CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltgekaivsdkpgtTrdinegrvklkgkeielvDtpGliegaseekglgkaflalee.adlillvvdaseeklkpldeelee 99 
                 v+++G p vGKStL+++ltg++++++++ +tT++++ g+v ++g +i+++D+pG+i+ga+++kg g+++ a+ + ++li++v+d++ + l+++ + +e+
  KHJ35502.1  66 VGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQMLDLPGIIQGAKDGKGRGRQVIAVAKtCHLIFIVLDVN-KPLTDK-KVIEA 162
                 89*********************************************************************99978********87.545433.33333 PP

                 HHHH.....TTSEEEEEEES CS
    MMR_HSR1 100 llee.....akkplilvlnk 114
                  le      +k+p  +v++k
  KHJ35502.1 163 ELEGfgiriNKQPPNIVFKK 182
                 22224444667777777665 PP

  == domain 2  score: -1.8 bits;  conditional E-value: 1.8
                 SHHHHHHHHHHHHHTTSEEEEEEES CS
    MMR_HSR1  90 lkpldeeleelleeakkplilvlnk 114
                 +++l  ++ e +++a +p+i++lnk
  KHJ35502.1 226 IDDL-IDVLEAKSRAYIPVIYALNK 249
                 3333.44444445577888888887 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.5   0.0   7.2e-12   1.3e-08       3      58 ..      66     121 ..      64     152 .. 0.90
   2 ?   -0.8   0.0      0.56     1e+03     106     121 ..     241     256 ..     229     262 .. 0.79

  Alignments for each domain:
  == domain 1  score: 34.5 bits;  conditional E-value: 7.2e-12
                 EEEEESTTSSHHHHHHHHHTTSEEEEESTTSSSEEEEEEEEETTEEEEEEE----S CS
      FeoB_N   3 valvGnpnvGkttlfnaltgakqkvgNwpGvtvekkegklklkgkeveivDlPGiY 58 
                 v ++G p vGk+tl+ +ltg++++ + +  +t     g++ ++g +++++DlPGi 
  KHJ35502.1  66 VGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQMLDLPGII 121
                 7789**************************************************95 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.56
                 SSEEEEEETHHHHHHT CS
      FeoB_N 106 vpvvlalnmideaekk 121
                 +pv+ aln+id+++ +
  KHJ35502.1 241 IPVIYALNKIDAISIE 256
                 6899999*99998765 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.2   0.1     0.011        19       1      23 [.      66      88 ..      66     107 .. 0.81
   2 !   11.7   0.0   0.00011       0.2     101     146 ..     110     158 ..     105     166 .. 0.88

  Alignments for each domain:
  == domain 1  score: 5.2 bits;  conditional E-value: 0.011
                EEEEEBTTTTHHHHHHHHHTS-- CS
   Dynamin_N  1 iavvGsqSsGKSSvlnaLlgedi 23
                + ++G  S GKS+++  L+g++ 
  KHJ35502.1 66 VGFIGFPSVGKSTLMSRLTGQHS 88
                5689999*************985 PP

  == domain 2  score: 11.7 bits;  conditional E-value: 0.00011
                 -SEEEEE---B-SSSGTTS...HHHHHHHSTTEEEEEEEETTS-CCC-C CS
   Dynamin_N 101 kgltlvDlPGldsvnkrdq...elvkeyikkadiilavtsanhdlsnse 146
                  ++ ++DlPG+++ +k  +   + v   +k +++i+ v++ n+ l++++
  KHJ35502.1 110 AKIQMLDLPGIIQGAKDGKgrgRQVIAVAKTCHLIFIVLDVNKPLTDKK 158
                 57899*********999999999999999***************99775 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.3   0.0    0.0072        13       5      29 ..      65      89 ..      62     101 .. 0.82
   2 ?   -1.5   0.0      0.84   1.5e+03      67      81 ..     107     121 ..      87     158 .. 0.62
   3 !    5.9   0.0    0.0047       8.3     119     141 ..     237     260 ..     227     290 .. 0.66

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0072
                EEEEEESTTSSHHHHHHHHHHHTTS CS
    GTP_EFTU  5 nigiighvDhGKtTLtdrLlyktga 29
                 +g+ig    GK+TL+ rL+ ++++
  KHJ35502.1 65 SVGFIGFPSVGKSTLMSRLTGQHSE 89
                689999999**********976655 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.84
                 CSSEEEEEEEESSSG CS
    GTP_EFTU  67 tkkylinliDtPGHv 81 
                 ++  +i+++D PG +
  KHJ35502.1 107 YNGAKIQMLDLPGII 121
                 566677777777643 PP

  == domain 3  score: 5.9 bits;  conditional E-value: 0.0047
                 HHTTTEEEEEEESCGST.HHHHHH CS
    GTP_EFTU 119 lkegvpiivfiNKmDrl.kaelke 141
                 ++  +p+i ++NK+D + ++el+ 
  KHJ35502.1 237 SRAYIPVIYALNKIDAIsIEELDL 260
                 556677888888888776555543 PP

>> MeaB  Methylmalonyl Co-A mutase-associated GTPase MeaB
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.0   0.1     1e-05     0.018      25      53 ..      60      87 ..      57     112 .. 0.81

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1e-05
                G-S-SEEEEEEE-TTSSHHHHHHHHHHHH CS
        MeaB 25 kaGraqvvGltGvPGaGkstlvealglel 53
                ++G a  vG+ G+P +Gkstl+++l+ + 
  KHJ35502.1 60 RTGVA-SVGFIGFPSVGKSTLMSRLTGQH 87
                56655.58*****************8765 PP

>> Arf  ADP-ribosylation factor family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.3   0.0    0.0016       2.9      19      67 ..      68     119 ..      62     125 .. 0.81
   2 ?    3.7   0.0     0.021        38      89     153 ..     213     278 ..     199     290 .. 0.73

  Alignments for each domain:
  == domain 1  score: 7.3 bits;  conditional E-value: 0.0016
                 EEESTTSSHHHHHHHHHHSSCEE...CSSSSSEEEEEEEETTEEEEEEEE-S CS
         Arf  19 llGLDnaGKtTilkklkleelvt...tvPTigfnveeleiknlkftvwDvGG 67 
                 ++G  + GK+T++ +l+ ++ +       T+     ++++++ k+++ D+ G
  KHJ35502.1  68 FIGFPSVGKSTLMSRLTGQHSEAaayEFTTLTTVPGQVMYNGAKIQMLDLPG 119
                 7899999*********877665533356677777789************987 PP

  == domain 2  score: 3.7 bits;  conditional E-value: 0.021
                 EETT-CT.THHHHHHHHHHHCTSGCCTTSEEEEEEE-TTSTTSS-HHHHHHHTTGGGSSSSSSEEE CS
         Arf  89 vDsadre.RleeakeeLkalleeeelkevallvlaNKqDlpealseeelrellgleelkgkrklei 153
                 + sad   R + + ++L  +le +  + ++++   NK+D+ +  + + l ++ +   +++++ ++i
  KHJ35502.1 213 ISSADIAiRCDATIDDLIDVLEAKSRAYIPVIYALNKIDAISIEELDLLYRIPNACPISSEHGWNI 278
                 6666655599999999***********************765444443333334444555666655 PP

>> Chlam_PMP  Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   0.00012      0.22       6      24 ..      20      54 ..      19      56 .. 0.95

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 0.00012
   Chlam_PMP  6 nNtatvss................tptpaaggGGA 24
                +N+at++                 tpt+++ggGGA
  KHJ35502.1 20 KNKATSFHlgqlkaklaklkrellTPTTSGGGGGA 54
                79********************************9 PP

>> RsgA_GTPase  RsgA GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.4   0.1    0.0021       3.7     102     124 ..      66      88 ..       6     120 .. 0.86
   2 ?   -2.1   0.1       1.8   3.2e+03      19      57 ..     144     184 ..     134     194 .. 0.74
   3 ?    2.3   0.0     0.079   1.4e+02      41      65 ..     235     258 ..     219     292 .. 0.69

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.0021
                  EEEECSTTSSHHHHHHHHCTT-- CS
  RsgA_GTPase 102 svlvGqSGvGKStLinallpele 124
                  + ++G   vGKStL+ +l+++++
   KHJ35502.1  66 VGFIGFPSVGKSTLMSRLTGQHS 88 
                  55899999***********9754 PP

  == domain 2  score: -2.1 bits;  conditional E-value: 1.8
                  EEEEEESTTTT--HHHHHHHH..HHHHHTT-EEEEEEE-GG CS
  RsgA_GTPase  19 llivvslkepelslnlldrfL..vlaeekgiepvivlnKiD 57 
                  ++iv+ +++p ++++ ++  L  + +  ++ +p iv+ K D
   KHJ35502.1 144 IFIVLDVNKPLTDKKVIEAELegFGIRINKQPPNIVFKKKD 184
                  67888888888888888777733345566778888888887 PP

  == domain 3  score: 2.3 bits;  conditional E-value: 0.079
                  HHHHTT-EEEEEEE-GGG--HHHHH CS
  RsgA_GTPase  41 laeekgiepvivlnKiDlleeeeel 65 
                  +  ++ i+++ +lnKiD ++ ee l
   KHJ35502.1 235 AKSRAYIPVIYALNKIDAISIEE-L 258
                  445567888899*******9988.3 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (367 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       614  (0.0342462); expected 358.6 (0.02)
Passed bias filter:                      542  (0.0302304); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 0.53u 0.23s 00:00:00.76 Elapsed: 00:00:00.40
# Mc/sec: 2746.85
//
Query:       KHJ35503.1  [L=217]
Description: hypothetical protein EV44_g0032 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.12   12.2   0.0       0.21   11.4   0.0    1.3  1  DC_STAMP  DC-STAMP-like protein
       0.14   12.4   0.0       0.33   11.2   0.0    1.6  2  DUF5451   Family of unknown function (DUF5451)


Domain annotation for each model (and alignments):
>> DC_STAMP  DC-STAMP-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.4   0.0   2.4e-05      0.21      17      60 ..      23      66 ..      21      70 .. 0.93

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 2.4e-05
    DC_STAMP 17 rkqqgketvlpLkkeerkkyvkvtslrltkkErkrllrsllkll 60
                ++q+g+ +v  ++ + ++ yvk  s++ t++E+ ++++++++l+
  KHJ35503.1 23 QQQNGNSKVSKINLQPSNIYVKCGSISYTSEELDKAAAQACPLM 66
                5689999**********************************997 PP

>> DUF5451  Family of unknown function (DUF5451)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   3.6e-05      0.33      71     116 ..      48      93 ..      29     102 .. 0.89
   2 ?   -2.3   0.0      0.55   4.9e+03      56      66 ..     181     191 ..     161     214 .. 0.66

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 3.6e-05
     DUF5451  71 vestpqdleaeevqsppritgmvelqqdrytmrpplylpallaryg 116
                 +  t ++l+   +q++p +tg  +    r+  +p +y  +lla+  
  KHJ35503.1  48 ISYTSEELDKAAAQACPLMTGKGKFLGIRWKTKPTVYQGTLLAKSE 93 
                 5678899************************************976 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.55
     DUF5451  56 fplapqqverp 66 
                  p ap+ v rp
  KHJ35503.1 181 HPGAPNSVHRP 191
                 45555555555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (217 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       392  (0.021864); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.35u 0.26s 00:00:00.61 Elapsed: 00:00:00.36
# Mc/sec: 1807.91
//
Query:       KHJ35504.1  [L=510]
Description: putative glucose transporter [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.1e-78  262.1  32.0    4.5e-77  259.8  32.0    1.7  1  Sugar_tr  Sugar (and other) transporter
    9.3e-25   87.3  61.7    4.8e-22   78.4  31.5    2.1  2  MFS_1     Major Facilitator Superfamily


Domain annotation for each model (and alignments):
>> Sugar_tr  Sugar (and other) transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  259.8  32.0     5e-81   4.5e-77       3     443 ..      20     491 ..      18     493 .. 0.93

  Alignments for each domain:
  == domain 1  score: 259.8 bits;  conditional E-value: 5e-81
                 HHHHHHHHHHHHHHHCGGGTHHHHHHHHTSTT--SHHHHHH...........HHHHHHHTHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH CS
    Sugar_tr   3 lvaalggllfgYdtgvigafltllkfaknfglsksksskee........ssvlsglivsiflvGaiiGslfagllgdrfGRkkslliaavlfvigavlq 93 
                 ++ +lg++++g++++ ++a++ l+ +  n   + +   k+         ++     + s+f++G++iG++++g   +++GR k++  ++++fv+g++l 
  KHJ35504.1  20 FISTLGPIQYGFHLAELNAPQDLIMCGHNSITKGNIHLKALglsnciqmTEAIFASLSSVFVIGGFIGAVITGQGCNIYGRLKTMRLMSLFFVVGSILE 118
                 5678899******************888888877777555599***9998888889999**************************************** PP

                 H-TTTTSS-TGGGGGHHHHHHHHHHHHHHHHHHHHTTS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTHHHHHHHCCHHHHHHHHHHGGGS- CS
    Sugar_tr  94 aaakgknsvevlivgRvlvGigvGlasvlvPmyisEiApkklRgalvslyqlaitfGilvaaifglglnktsnadgwrillglqlvpallllilllflP 192
                  +a+   sv  li+gR+l+G+g+G+a+v++P+yisEi+p+klR+  ++++q++i +Gil+++++g+++ + s+   wr+ l +   + ++ +++l+f+P
  KHJ35504.1 119 TVAE---SVLTLIIGRFLTGLGAGTATVVTPLYISEISPPKLRSLSGTITQTMICLGILLTQTLGYVFRYASQ---WRFILVFGTGLGIVHAVFLFFIP 211
                 ****...***************************************************************999...*********************** PP

                 --HHHHHHTT-HHHHHHHHHHHHHC.HHHHHHHHHHHHHHHHHHH...............................HTTHHHHSH............HH CS
    Sugar_tr 193 ESPrylvekgkeeeakevlaklrge.edadrelaeekdsleaeqeee..........................kaswkellsskt.........vrqrl 255
                 ESP +l+  ++ + ak+vl+ +r    + ++e+a + +++  + eee                                  s+k+         +  ++
  KHJ35504.1 212 ESPAWLLLSKNPQLAKQVLQSIRSArYPIHKEIATWNNMNPTSAEEEpliasprslvtrneldnsinaefttgL------PSKKGiftvlhdplYYPAV 304
                 *********************99986888999999999999999999***************999985544431......4444455555567788999 PP

                 HHHHHHHHHHHHTTHHHHHHHTTTHHHHSS-THHHHHHHHHHHHHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHH..HHHHTTSS...CHHHHH CS
    Sugar_tr 256 ligvvlqifqqltGinaimyysptifenlglsksllvtiivgvvnfvatfvaiflvdrfGRRtllllGaagmaicfvilgivalllvakskaasivaiv 354
                 + +v+++++qql+Gin+i  ys ++++ +    s +  i+++++n+vat++ ++lv ++GR+ +ll+++agm ++ +il+    l+ +     + +a +
  KHJ35504.1 305 IAVVGVMFAQQLSGINSINLYSVSLLHGVLPISSRALAIVISTINVVATIICAPLVYYIGRKSCLLISIAGMGAMSFILA--LSLVLEL----KLLAAF 397
                 99999************************999999********************************************8..3333333....69**** PP

                 HHHHHHHHHHTTTTHHHHHHHHHHSHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH.....T-HHHHHHHHHHHHHHHHHHHHS--STT- CS
    Sugar_tr 355 fialfialfalgwgpvpwvlvsElfpqsvRskalaiavavnwlanflisllfpiiteaig.....ggyvflvfaglavlfiifvfffvpetkgr 443
                 +++lf+ +fa+g+gpvp +++sEl  ++  s++++ + a n +a+fl++++fp + + ++      g+vf+ fa+ a++++ifv  +vpetkg+
  KHJ35504.1 398 AVLLFVGFFATGLGPVPIIMASELVGLEAVSATQSWCLAGNYMATFLVAQFFPLVNSWMNaqwggTGWVFFGFAASAIMSFIFVAYCVPETKGK 491
                 ********************************************************99999999999*************************98 PP

>> MFS_1  Major Facilitator Superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.4  31.5   5.4e-26   4.8e-22      28     351 ..      32     444 ..      11     446 .. 0.79
   2 !   23.0  22.2   3.5e-09   3.2e-05      36     182 ..     340     495 ..     304     508 .. 0.67

  Alignments for each domain:
  == domain 1  score: 78.4 bits;  conditional E-value: 5.4e-26
       MFS_1  28 g...................................ispseigllltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfasslwlllvl 91 
                 +                                   ++++ +  l +++ +g +++++++G   + +Gr +++ l+ l+f++g++l ++a s+ +l+++
  KHJ35504.1  32 HlaelnapqdlimcghnsitkgnihlkalglsnciqMTEAIFASLSSVFVIGGFIGAVITGQGCNIYGRLKTMRLMSLFFVVGSILETVAESVLTLIIG 130
                 33344455566666666666666666666666666678888888***************************************55555657777***** PP

       MFS_1  92 rvlqGlgagalfpagaaliadwfpkeergraigllsagfslGailgpllggllasslgWravfyilaivsllafvlfllllpeepperkrkspkeee.. 188
                 r+l+Glgag+++ +   +i++++p++ r++   + ++++ lG++l+  lg ++  +  Wr + ++ ++++++ +v   +l++ ++++ +   +k     
  KHJ35504.1 131 RFLTGLGAGTATVVTPLYISEISPPKLRSLSGTITQTMICLGILLTQTLGYVFRYASQWRFILVFGTGLGIVHAV---FLFFIPESPAWLLLSKNPQla 226
                 ******************************************************9999***************99...888888888888888888889 PP

       MFS_1 189 ...............................................kgtgpaplvp..............awkallkdpvlwillialllfffgfsg. 225
                                                                         +              ++  +l+dp  + ++ia+++++f+ ++ 
  KHJ35504.1 227 kqvlqsirsarypihkeiatwnnmnptsaeeepliasprslvtrnelD--------NsinaefttglpskkGIFTVLHDPLYYPAVIAVVGVMFAQQLs 317
                 *********************999999988888777776666666662........0444444445566666777777775545666666666666668 PP

       MFS_1 226 ....lltllplylqevlglsglllaglllallalvgailallagrlsdrlgrrrrlllallllllaalglallavtssavllll.vlvliGfglgfvfp 319
                     +  ++ ++l+ vl +s    ++    +++ +++++ ++++ l+  +gr+  ll++++++ +++++lal  v + ++l+++ vl+++Gf++    p
  KHJ35504.1 318 ginsINLYSVSLLHGVLPIS-SRALA---IVISTINVVATIICAPLVYYIGRKSCLLISIAGMGAMSFILALSLVLELKLLAAFaVLLFVGFFATGLGP 412
                 88889999999999999999.34444...55555555558888888888888************************9999999978888***7777899 PP

       MFS_1 320 sllalasdlappeeagtasglfntagslggal 351
                   + +as+l++ e+  + +++    ++ +++l
  KHJ35504.1 413 VPIIMASELVGLEAVSATQSWCLAGNYMATFL 444
                 99999999999888888887777777766665 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 3.5e-09
       MFS_1  36 llltlyalgaavaslplGrlsdrfGrrrvlllglllfalglllllfa....sslwlllvlrvlqGlgagalfpagaaliadwfpkeergraigllsagf 130
                  l+ + +   +va+++ ++l+  +Gr+++ll++++++++++++l+++      l + +++ ++ G++a +l p+ ++++++++  e  +   ++  ag+
  KHJ35504.1 340 ALAIVISTINVVATIICAPLVYYIGRKSCLLISIAGMGAMSFILALSlvleLKLLAAFAVLLFVGFFATGLGPVPIIMASELVGLEAVSATQSWCLAGN 438
                 233334445566666666666667****************88888533455455556666669999999**********************99988877 PP

       MFS_1 131 slGai....lgpllgglla.sslgWravfyilaivsllafvlfllllpeepperkrk 182
                  +++     + pl+ +++  +++g  +vf+ +a+ ++++f++++  +pe++ ++ ++
  KHJ35504.1 439 YMATFlvaqFFPLVNSWMNaQWGGTGWVFFGFAASAIMSFIFVAYCVPETKGKNNPD 495
                 777751122568888899967777999999999999999997555555555444444 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (510 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       830  (0.0462937); expected 358.6 (0.02)
Passed bias filter:                      352  (0.019633); expected 358.6 (0.02)
Passed Vit filter:                        31  (0.00172904); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.57u 0.26s 00:00:00.83 Elapsed: 00:00:00.40
# Mc/sec: 3815.61
//
Query:       KHJ35505.1  [L=528]
Description: hypothetical protein EV44_g1464 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.6e-94  316.5   3.1    2.6e-94  316.5   3.1    1.6  2  DUF5102   Domain of unknown function (DUF5102)


Domain annotation for each model (and alignments):
>> DUF5102  Domain of unknown function (DUF5102)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.4      0.25   4.4e+03     192     192 ..      58      58 ..      12      95 .. 0.46
   2 !  316.5   3.1   1.5e-98   2.6e-94       2     288 ..     250     527 ..     249     528 .] 0.89

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 0.25
     DUF5102 192 s 192
                 +
  KHJ35505.1  58 N 58 
                 1 PP

  == domain 2  score: 316.5 bits;  conditional E-value: 1.5e-98
     DUF5102   2 gdDfddFeegaeaeddddFgDFddgfqeeeaeeseeaeeeepaepsasslsfplldfesldlesdllaaleeeldelfppseekeirslevplskesqi 100
                 gdDfddFe g+   +d++Fg+Fd+ fq+++ ++       + +++ ++   fp+ldf+  d+++++++ale++l+ lfp+++  + + l+ pls++++ 
  KHJ35505.1 250 GDDFDDFEGGE---EDAEFGEFDNSFQQATPSK-------SLPSSIQKINRFPVLDFTIYDTPEEIQDALEPYLNVLFPTDT-IDNSVLP-PLSDDNST 336
                 8*******996...689******99*9999422.......233445566789**************************9887.6778888.8******* PP

     DUF5102 101 flterslsLwsqLvapPplqppnWirSriRRlfLvsLGvPvdLDeiLpaskqkklvLPsleleseksssssrssr....vkrlkq..anasstsvdssa 193
                 flt+rs+sLw+qL apP+lqpp Wi+SriRRlfLvsLGvPvdLDeiLpaskqkkl+LPs++l+  ++s+s+r+s+     +rlk+   ++s  s ds++
  KHJ35505.1 337 FLTPRSASLWTQLIAPPSLQPPRWIQSRIRRLFLVSLGVPVDLDEILPASKQKKLILPSVNLN--PMSKSPRNSSdsplNSRLKRgdDSESCISLDSQG 433
                 *************************************************************94..566666633335687777776678889999**** PP

     DUF5102 194 sakksrssssrr.rgpppePelDlkaarrLcattdeaLkgltdeeLkehvkeLeelteeasevLeYwlkrrDekigdkEafegvIenLVkharkvr 288
                 +++++  +s+r  + +p +P+lDl +ar+Lc+tt+eaL+glt ee+k h+k+L++++ +a+evL +w++r+ ek+gd++afegvIenLVkhark r
  KHJ35505.1 434 KPSRQ--DSQRNiQLKPAPPTLDLFSARQLCMTTNEALSGLTGEEMKLHLKRLKRIESRAKEVLIFWTERKKEKLGDRDAFEGVIENLVKHARKAR 527
                 99988..3334459999*****************************************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (528 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       593  (0.0330749); expected 358.6 (0.02)
Passed bias filter:                      424  (0.0236488); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.53u 0.27s 00:00:00.80 Elapsed: 00:00:00.42
# Mc/sec: 3777.86
//
Query:       KHJ35506.1  [L=432]
Description: putative transcription factor c2h2 protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
     0.0066   17.2   3.5        1.5    9.8   0.3    2.9  2  zf-C2H2_4  C2H2-type zinc finger
  ------ inclusion threshold ------
      0.099   13.1   9.5       0.41   11.2   0.4    3.2  3  zf-C2H2    Zinc finger, C2H2 type


Domain annotation for each model (and alignments):
>> zf-C2H2_4  C2H2-type zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    7.2   0.2    0.0012        11       6      21 ..     377     393 ..     374     396 .. 0.88
   2 !    9.8   0.3   0.00017       1.5       3      20 ..     404     421 ..     402     424 .. 0.78

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.0012
   zf-C2H2_4   6 C.gksFsskkaLlrHlk 21 
                 C g+ Fs+ ++LlrH +
  KHJ35506.1 377 CnGRQFSTFSNLLRHQR 393
                 999************87 PP

  == domain 2  score: 9.8 bits;  conditional E-value: 0.00017
   zf-C2H2_4   3 CpiCgksFsskkaLlr.Hl 20 
                 Cp+Cg+ F++ +a ++ Hl
  KHJ35506.1 404 CPHCGAEFTRTTA-RNgHL 421
                 ********88777.44486 PP

>> zf-C2H2  Zinc finger, C2H2 type
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.2       1.6   1.5e+04      10      19 ..     150     159 ..     149     159 .. 0.88
   2 ?   11.2   0.4   4.5e-05      0.41       3      21 ..     372     393 ..     371     394 .. 0.87
   3 ?    7.2   0.3   0.00083       7.5       2      19 ..     403     420 ..     402     423 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 1.6
                 ESSHHHHHHH CS
     zf-C2H2  10 FkrksnLkrH 19 
                 F+++ +++ H
  KHJ35506.1 150 FNTWPQFELH 159
                 9999999998 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 4.5e-05
                 ET..TTT.EEESSHHHHHHHHH CS
     zf-C2H2   3 Cp..dCg.ksFkrksnLkrHir 21 
                 C   +C+ + F++ snL rH+r
  KHJ35506.1 372 CWehGCNgRQFSTFSNLLRHQR 393
                 66669999*************9 PP

  == domain 3  score: 7.2 bits;  conditional E-value: 0.00083
                 EETTTTEEESSHHHHHHH CS
     zf-C2H2   2 kCpdCgksFkrksnLkrH 19 
                  Cp+Cg  F+r    + H
  KHJ35506.1 403 SCPHCGAEFTRTTARNGH 420
                 5*****999987765555 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (432 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       572  (0.0319036); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        43  (0.00239835); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.50u 0.24s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 3088.15
//
Query:       KHJ35507.1  [L=404]
Description: putative mrna binding post-transcriptional regulator [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-44  149.3   0.0    7.5e-17   60.9   0.0    3.2  3  RRM_1         RNA recognition motif. (a.k.a. RRM, RBD, or RNP
    2.1e-06   27.6   0.1     0.0015   18.5   0.0    3.3  3  Nup35_RRM_2   Nup53/35/40-type RNA recognition motif
      3e-05   24.0   0.0     0.0012   18.8   0.0    2.8  3  RRM_3         RNA binding motif
    9.6e-05   22.2   0.0      0.057   13.3   0.0    2.5  3  RRM_occluded  Occluded RNA-recognition motif
    0.00053   20.1   0.2      0.051   13.7   0.0    2.8  3  RRM_7         RNA recognition motif
     0.0073   15.9   0.0      0.038   13.6   0.0    2.0  2  RRM_5         RNA recognition motif. (a.k.a. RRM, RBD, or RNP


Domain annotation for each model (and alignments):
>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   8.6e-11   2.6e-07       1      67 [.      71     136 ..      71     137 .. 0.92
   2 !   54.6   0.0   2.4e-18   7.2e-15       1      69 [.     163     233 ..     163     234 .. 0.97
   3 !   60.9   0.0   2.5e-20   7.5e-17       1      69 [.     296     359 ..     296     360 .. 0.97

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 8.6e-11
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggr 67 
                 l++g L p ++e+ ++ +  + G+ +++k++rd+   + g++f++F s+ +A+kAl+ lng +++++
  KHJ35507.1  71 LWMGELEPWIDENFIRSVWFGMGETVNVKMIRDKFSGNAGYCFIDFSSPAAAAKALS-LNGSMIPNT 136
                 5778888888899999999999***********************************.****99885 PP

  == domain 2  score: 54.6 bits;  conditional E-value: 2.4e-18
                 EEEESETTTSSHHHHHHHHHT.TSCEEEEEEEEE.TTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFsk.fGpiksiklvrd.etgkskgfafVeFeskedAekAlealngkklggrel 69 
                 +fVg+L p+v+e  L  lF+  f + ks+k+++d   g s+g++fV+F+s+ d ++Al++++g   g+r++
  KHJ35507.1 163 IFVGDLGPEVNEYVLVSLFQArFPSCKSAKIMTDpISGMSRGYGFVRFASEQDQQRALNEMQGVYCGNRPM 233
                 8**************************************************************99999987 PP

  == domain 3  score: 60.9 bits;  conditional E-value: 2.5e-20
                 EEEESETTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE CS
       RRM_1   1 lfVgnLppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklggrel 69 
                 +fVg+L+ +vte+eL+ +F++fG+i+ +k+++      kg++fV+F ++ +Ae A+++++g+ +g++++
  KHJ35507.1 296 VFVGGLSGYVTEDELRSFFQGFGEITYVKIPPG-----KGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 359
                 8*******************************7.....****************************987 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.3   0.0     0.027        81      25      53 .]      93     126 ..      91     126 .. 0.71
   2 ?    1.8   0.0     0.083   2.5e+02      38      53 .]     205     220 ..     190     220 .. 0.88
   3 !   18.5   0.0   5.1e-07    0.0015      14      52 ..     307     345 ..     293     346 .. 0.80

  Alignments for each domain:
  == domain 1  score: 3.3 bits;  conditional E-value: 0.027
  Nup35_RRM_2  25 GeIvk.hyvp.....kevsvmyvkfesekdaekAL 53 
                  Ge+v+ + +      ++  + ++ f s+ +a+kAL
   KHJ35507.1  93 GETVNvK-MIrdkfsGNAGYCFIDFSSPAAAAKAL 126
                  6666641.22244446777899************8 PP

  == domain 2  score: 1.8 bits;  conditional E-value: 0.083
  Nup35_RRM_2  38 vmyvkfesekdaekAL 53 
                  + +v+f+se d ++AL
   KHJ35507.1 205 YGFVRFASEQDQQRAL 220
                  789***********98 PP

  == domain 3  score: 18.5 bits;  conditional E-value: 5.1e-07
  Nup35_RRM_2  14 ielVlehFasfGeIvkhyvpkevsvmyvkfesekdaekA 52 
                  +++ + +F+ fGeI+   +p+++   +v+f  + +ae+A
   KHJ35507.1 307 EDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 345
                  345677********************************9 PP

>> RRM_3  RNA binding motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.0   0.0       0.3     9e+02       8      40 ..      91     123 ..      88     127 .. 0.85
   2 ?    0.5   0.0      0.21   6.3e+02      40      57 ..     206     223 ..     201     233 .. 0.87
   3 !   18.8   0.0     4e-07    0.0012       4      58 ..     296     350 ..     294     362 .. 0.92

  Alignments for each domain:
  == domain 1  score: -0.0 bits;  conditional E-value: 0.3
                 E-SSS--HHHHHHHCHCCS-ECEEEE-TTSSEE CS
       RRM_3   8 Glnkelsredikellsklgevayvdyekgdkeg 40 
                 G+++ + ++ i++ +s      ++d+++ ++ +
  KHJ35507.1  91 GMGETVNVKMIRDKFSGNAGYCFIDFSSPAAAA 123
                 7888899999******999999***99877665 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.21
                 EEEEESSHHHHHHHHHHH CS
       RRM_3  40 gevrFkedeeakkaleka 57 
                 g vrF+++++ ++al+++
  KHJ35507.1 206 GFVRFASEQDQQRALNEM 223
                 78**********999876 PP

  == domain 3  score: 18.8 bits;  conditional E-value: 4e-07
                 EEEEE-SSS--HHHHHHHCHCCS-ECEEEE-TTSSEEEEEESSHHHHHHHHHHHH CS
       RRM_3   4 lklsGlnkelsredikellsklgevayvdyekgdkegevrFkedeeakkalekat 58 
                 +++ Gl+  ++ ++++ +++ +ge+ yv    g+  g v+F + ++a+ a++++ 
  KHJ35507.1 296 VFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQ 350
                 678899999*****************************************99865 PP

>> RRM_occluded  Occluded RNA-recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.2   0.0    0.0032       9.5      41      66 ..     112     136 ..      93     138 .. 0.89
   2 ?   -3.8   0.0         4   1.2e+04      43      72 ..     208     237 ..     207     238 .. 0.77
   3 !   13.3   0.0   1.9e-05     0.057       3      70 ..     295     361 ..     293     365 .. 0.90

  Alignments for each domain:
  == domain 1  score: 6.2 bits;  conditional E-value: 0.0032
  RRM_occluded  41 AivefkdekiagkasLaLdgsefegk 66 
                   +++ f++ ++a+ka L+L+gs + + 
    KHJ35507.1 112 CFIDFSSPAAAAKA-LSLNGSMIPNT 136
                   7899*****99997.9*****99875 PP

  == domain 2  score: -3.8 bits;  conditional E-value: 4
  RRM_occluded  43 vefkdekiagkasLaLdgsefegkklrcGt 72 
                   v f++e++  +a+ +++g    ++ +r++t
    KHJ35507.1 208 VRFASEQDQQRALNEMQGVYCGNRPMRIST 237
                   778888888888888888888888888776 PP

  == domain 3  score: 13.3 bits;  conditional E-value: 1.9e-05
  RRM_occluded   3 tisllplsDtvnkariralveekegeikkivLvpdheGAivefkdekiagkasLaLdgsefegkklrc 70 
                   t+ + +ls  v+++++r++++   gei+ + + p +++ +v+f ++++a  a+ +++g+ + + ++r 
    KHJ35507.1 295 TVFVGGLSGYVTEDELRSFFQGF-GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRL 361
                   5566679999*************.*********************9999999999***9999988775 PP

>> RRM_7  RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.8   0.0       2.4   7.2e+03      46      61 ..     105     120 ..      94     127 .. 0.64
   2 ?    3.2   0.0     0.033        99       4      71 ..     163     224 ..     161     245 .. 0.65
   3 !   13.7   0.0   1.7e-05     0.051       3      32 ..     295     325 ..     293     352 .. 0.81

  Alignments for each domain:
  == domain 1  score: -2.8 bits;  conditional E-value: 2.4
       RRM_7  46 skaakgyvflvfedek 61 
                  + + gy f+ f++  
  KHJ35507.1 105 FSGNAGYCFIDFSSPA 120
                 4456788888776654 PP

  == domain 2  score: 3.2 bits;  conditional E-value: 0.033
       RRM_7   4 vFvGGlPiDiteeelkatfkefgkvlvdwPkkaeskkkaaenskaakgyvflvfedeksvkaLleact 71 
                 +FvG l ++++e  l++ f++       +P  +  k  +   s   +gy f+ f +e+  ++ l++ +
  KHJ35507.1 163 IFVGDLGPEVNEYVLVSLFQA------RFPSCKSAKIMTDPISGMSRGYGFVRFASEQDQQRALNEMQ 224
                 788888888888888888764......34544433333333455567999999998888887777655 PP

  == domain 3  score: 13.7 bits;  conditional E-value: 1.7e-05
       RRM_7   3 kvFvGGlPiDiteeelkatfkefgkvl.vdw 32 
                  vFvGGl   +te+el + f+ fg+++ v  
  KHJ35507.1 295 TVFVGGLSGYVTEDELRSFFQGFGEITyVKI 325
                 69**********************9752555 PP

>> RRM_5  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.0   0.0      0.41   1.2e+03      64      94 ..     203     233 ..     198     249 .. 0.79
   2 !   13.6   0.0   1.3e-05     0.038       6     102 ..     274     367 ..     269     378 .. 0.84

  Alignments for each domain:
  == domain 1  score: -1.0 bits;  conditional E-value: 0.41
       RRM_5  64 ketalvqmgdasaveravqHLnnaklfgkrl 94 
                 +++ +v  +++++ +ra++ ++++   ++++
  KHJ35507.1 203 RGYGFVRFASEQDQQRALNEMQGVYCGNRPM 233
                 5788999999*********999987644444 PP

  == domain 2  score: 13.6 bits;  conditional E-value: 1.3e-05
       RRM_5   6 psllasvaatgspgaagvaegsVllVyglepdkvnldklFnlfclYgnvervkflktkketalvqmgdasaveravqHLnnaklfgkrlevalSKqq 102
                 p +  ++a +++  +   ++++ ++V gl    v+ d+l  +f  +g++  vk+    k+  +vq  +  a+e a++ +++ ++ ++r+++   + q
  KHJ35507.1 274 PPMGYYGAPQPM-NQFTDPNNTTVFVGGLS-GYVTEDELRSFFQGFGEITYVKIPP-GKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQ 367
                 556667777777.555677899999****6.689*******************965.579************************8889888776655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (404 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       355  (0.0198003); expected 358.6 (0.02)
Passed bias filter:                      287  (0.0160076); expected 358.6 (0.02)
Passed Vit filter:                        22  (0.00122706); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.49u 0.24s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 2901.27
//
Query:       KHJ35508.1  [L=566]
Description: putative nuclear pore glycoprotein p62 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.5e-39  131.8   3.7    9.5e-39  131.8   3.7    2.1  2  Nsp1_C    Nsp1-like C-terminal region
  ------ inclusion threshold ------
       0.16   11.8   5.1       0.39   10.6   3.4    2.0  2  DUF4435   Protein of unknown function (DUF4435)
       0.33   11.5   5.1        3.6    8.2   0.4    3.2  2  YtxH      YtxH-like protein
       0.67   10.2   8.4        7.1    7.0   0.3    3.3  3  DUF948    Bacterial protein of unknown function (DUF948)
        1.4    9.5   9.6        8.2    7.0   6.6    2.9  2  DUF16     Protein of unknown function DUF16
        2.3    8.0  10.3        2.5    7.8   8.2    2.1  2  TACC_C    Transforming acidic coiled-coil-containing protein 
        2.8    8.1  10.5    3.6e+02    1.3  10.5    2.9  1  CENP-Q    CENP-Q, a CENPA-CAD centromere complex subunit


Domain annotation for each model (and alignments):
>> Nsp1_C  Nsp1-like C-terminal region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.8   3.7   3.7e-42   9.5e-39       3     111 ..     340     448 ..     338     458 .. 0.95
   2 ?   -1.5   0.1      0.84   2.2e+03      69     108 ..     493     532 ..     463     540 .. 0.53

  Alignments for each domain:
  == domain 1  score: 131.8 bits;  conditional E-value: 3.7e-42
      Nsp1_C   3 aktveiapsaaslknktldelinkWtteLeeqekeFeeqakkvneWDrvLvengekIskLysevleaeqeqnkidqeLeyiesqqdeLeslLdnyEkel 101
                 ++tv+++p+ + lknkt+de+i++W+ +L++++keF+eqa kv++WDr++vengekI+kLy +++eae+++++i+++L  +e+qqde  s+Ld+yE+e+
  KHJ35508.1 340 SSTVGPTPQLTRLKNKTMDEIITRWASDLSKYQKEFQEQAIKVAAWDRLMVENGEKIQKLYLSTFEAERQNTEIERQLLNVENQQDEVASWLDKYESEI 438
                 578999999989*************************************************************************************** PP

      Nsp1_C 102 eellsklesq 111
                 +e++s++  q
  KHJ35508.1 439 DEMFSRQIGQ 448
                 ****988766 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.84
      Nsp1_C  69 aeqeqnkidqeLeyiesqqdeLeslLdnyEkeleellskl 108
                 + +++ k d+ L+ i +  ++  + L+ + +++e+l sk+
  KHJ35508.1 493 VLSKTGKADDPLSSIVRVLNNHLTTLQWIDENAEALKSKI 532
                 3334444455555555554444455555555555555555 PP

>> DUF4435  Protein of unknown function (DUF4435)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   3.4   0.00015      0.39     110     193 ..     361     441 ..     349     454 .. 0.72
   2 ?    0.3   0.0      0.21   5.4e+02     172     212 ..     459     499 ..     451     523 .. 0.81

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00015
     DUF4435 110 yktifdlfeqfleelseiiiplflwnvlfyrkklekdiklslslqevdlssiekitleeikvenkieelkeefpdkieeekeei 193
                   ++  + +++++e++e++i++++w+ l +++ + k  kl+ls+ e + +++e i+++ ++ven+++e+   + dk+e+e++e+
  KHJ35508.1 361 ITRWASDLSKYQKEFQEQAIKVAAWDRLMVENGE-KIQKLYLSTFEAERQNTE-IERQLLNVENQQDEVASWL-DKYESEIDEM 441
                 457777799*******************997774.445666777666666665.5677777788888888766.5566656554 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.21
     DUF4435 172 enkieelkeefpdkieeekeeikkelrklnqqdlklyiqGh 212
                 ++k  +l e++ d++++  +++++ ++++n+  + l   G+
  KHJ35508.1 459 REKTYKLAEKLTDRLDDMAKNLTSMINAINDASTVLSKTGK 499
                 478889999999999999999******99999999888888 PP

>> YtxH  YtxH-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.9   0.5      0.03        76      34      70 ..     308     382 ..     299     441 .. 0.82
   2 ?    8.2   0.4    0.0014       3.6      25      65 ..     464     534 ..     459     542 .. 0.86

  Alignments for each domain:
  == domain 1  score: 3.9 bits;  conditional E-value: 0.03
        YtxH  34 addlkekakelleeakeka......................................kekaedlkekvkekadel 70 
                 +++l +++ +++++ak ++                                      ++  ++++++++e+a ++
  KHJ35508.1 308 TENLTNQTSDTTTQAKTTTaeaeksvnapsfgsstvgptpqltrlknktmdeiitrwASDLSKYQKEFQEQAIKV 382
                 556666666666666655556556668888888888888888888888888888888888888888888887665 PP

  == domain 2  score: 8.2 bits;  conditional E-value: 0.0014
        YtxH  25 etRkdlkekaddlkekakelleeakeka..............................kekaedlkekvke 65 
                 ++ ++l +++dd++++++++++ +++ +                               e+ae+lk+k++e
  KHJ35508.1 464 KLAEKLTDRLDDMAKNLTSMINAINDAStvlsktgkaddplssivrvlnnhlttlqwiDENAEALKSKIEE 534
                 577999***************99999999999999999999999999999999988888888888888776 PP

>> DUF948  Bacterial protein of unknown function (DUF948)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   0.3    0.0028       7.1      30      60 ..     303     333 ..     293     377 .. 0.88
   2 ?   -3.6   0.0       5.5   1.4e+04      21      41 ..     417     437 ..     409     442 .. 0.52
   3 ?    6.3   1.1    0.0044        11      33      72 ..     464     502 ..     457     544 .. 0.74

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0028
      DUF948  30 eaaatieelekqvdpilkevedllakvnell 60 
                 +++++ e+l++q+  +++++++++a++++ +
  KHJ35508.1 303 KNTTSTENLTNQTSDTTTQAKTTTAEAEKSV 333
                 6778899999999999999999999999855 PP

  == domain 2  score: -3.6 bits;  conditional E-value: 5.5
      DUF948  21 llklkktldeaaatieelekq 41 
                 ll++++  de+a+ +++ e++
  KHJ35508.1 417 LLNVENQQDEVASWLDKYESE 437
                 344444444554444444444 PP

  == domain 3  score: 6.3 bits;  conditional E-value: 0.0044
      DUF948  33 atieelekqvdpilkevedllakvnelledvneklekvdp 72 
                 +  e+l++++d + k+++ +++ +n+ ++ v +k+ k d 
  KHJ35508.1 464 KLAEKLTDRLDDMAKNLTSMINAIND-ASTVLSKTGKADD 502
                 66788899999999999999999999.6666666666554 PP

>> DUF16  Protein of unknown function DUF16
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.0   6.6    0.0032       8.2      33     102 ..     407     476 ..     346     484 .. 0.86
   2 ?   -1.2   0.0       1.1   2.8e+03      36      69 ..     504     537 ..     486     548 .. 0.62

  Alignments for each domain:
  == domain 1  score: 7.0 bits;  conditional E-value: 0.0032
                 HHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHHH CS
       DUF16  33 kqrLkkieakvdklgeqinkleqkvekqgekikelkveqkaqgeelnkvdetleliletLqkinkRlDsi 102
                 + + ++ie ++   ++q+++++   +k + +i+e+  +q  qge ++  d+  e   +  +k+ +RlD +
  KHJ35508.1 407 ERQNTEIERQLLNVENQQDEVASWLDKYESEIDEMFSRQIGQGEIVQGPDQEREKTYKLAEKLTDRLDDM 476
                 4556899999999*******************************9**88888888888888888888887 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 1.1
                 HHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHH CS
       DUF16  36 Lkkieakvdklgeqinkleqkvekqgekikelkv 69 
                 L  i   ++ +   ++ + ++ e++  ki+e ++
  KHJ35508.1 504 LSSIVRVLNNHLTTLQWIDENAEALKSKIEESQK 537
                 4445555555555556666666666666655443 PP

>> TACC_C  Transforming acidic coiled-coil-containing protein (TACC), C-terminal
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.8   8.2   0.00099       2.5       4     128 ..     355     475 ..     349     487 .. 0.74
   2 ?   -0.5   0.1      0.34   8.8e+02      73     122 ..     486     535 ..     462     541 .. 0.63

  Alignments for each domain:
  == domain 1  score: 7.8 bits;  conditional E-value: 0.00099
      TACC_C   4 kdldaalekvkeeveekeeeiqelkkkveelkkenqemkkivaefektiaql...ieekqkqkelakkeiqkvleekeqlladlnsveksfsdlfkrye 99 
                 k +d+ +++   +  +       ++k+ +e+  +++   +++ e  + i++l   + e+++q+++ ++++ +v ++++++++ l + e +++++f+r  
  KHJ35508.1 355 KTMDEIITRWASDLSK-------YQKEFQEQAIKVAAWDRLMVENGEKIQKLylsTFEAERQNTEIERQLLNVENQQDEVASWLDKYESEIDEMFSRQI 446
                 4455555554444444.......566666666666666555544444444431114577888889999999999************************* PP

      TACC_C 100 kqkevlegykkneeslkkcaeeylarvkk 128
                  q e ++g  +  e   k ae++ +r+  
  KHJ35508.1 447 GQGEIVQGPDQEREKTYKLAEKLTDRLDD 475
                 ********999999999999999998865 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.34
      TACC_C  73 vleekeqlladlnsveksfsdlfkryekqkevlegykkneeslkkcaeey 122
                 ++++ + +l++  + +  +s +++ +++   +l+   +n e+lk+++ee 
  KHJ35508.1 486 AINDASTVLSKTGKADDPLSSIVRVLNNHLTTLQWIDENAEALKSKIEES 535
                 34555555555555666677777777777777777777888888777764 PP

>> CENP-Q  CENP-Q, a CENPA-CAD centromere complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.3  10.5      0.14   3.6e+02      82     165 ..     458     537 ..     288     538 .. 0.78

  Alignments for each domain:
  == domain 1  score: 1.3 bits;  conditional E-value: 0.14
      CENP-Q  82 erkeklkkehvllqesdseelslleassdevlgea..sgtvfsdlepeldeellpllqqLgshLesmrgnlaqlegllpalerska 165
                 er+++ k +++l+++ d+ +++l +  +          +tv s+   + d+ l++++  L++hL +++   ++ e l+ ++e+s++
  KHJ35508.1 458 EREKTYKLAEKLTDRLDDMAKNLTSMINA-----IndASTVLSK-TGKADDPLSSIVRVLNNHLTTLQWIDENAEALKSKIEESQK 537
                 23333344444444444444443333333.....0323444443.34568999999999999999999888888888888888886 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (566 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1619  (0.0903006); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        51  (0.00284455); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.72u 0.27s 00:00:00.99 Elapsed: 00:00:00.44
# Mc/sec: 3888.42
//
Query:       KHJ35509.1  [L=298]
Description: putative ump-cmp kinase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.9e-46  156.6   0.0    6.7e-46  156.1   0.0    1.2  1  ADK              Adenylate kinase
      7e-35  120.4   0.1    1.2e-34  119.6   0.1    1.4  1  AAA_17           AAA domain
      8e-09   36.1   0.0    1.4e-08   35.3   0.0    1.4  1  AAA_18           AAA domain
    1.1e-07   31.8   0.3    0.00083   19.1   0.1    2.2  2  Thymidylate_kin  Thymidylate kinase
    5.8e-06   26.5   0.0    1.5e-05   25.2   0.0    1.7  1  AAA_33           AAA domain
     0.0034   16.7   0.1      0.012   14.9   0.1    1.9  1  Zeta_toxin       Zeta toxin
  ------ inclusion threshold ------
       0.14   12.0   0.0       0.26   11.2   0.0    1.4  1  Ploopntkinase3   P-loop Nucleotide Kinase3
       0.14   11.9   0.1       0.26   11.1   0.1    1.4  1  dNK              Deoxynucleoside kinase


Domain annotation for each model (and alignments):
>> ADK  Adenylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.1   0.0     3e-49   6.7e-46       1     150 [.     110     270 ..     110     271 .. 0.94

  Alignments for each domain:
  == domain 1  score: 156.1 bits;  conditional E-value: 3e-49
                 EEESTTSSHHHHHHHHHHHHTSEEEEHHHHHHHHH.HCT-HHHHHHHHHHHTTSS--HHHHHHHHHHHHHCH.....GTTTEEEEESB-SSHHHHHHHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxx RF
         ADK   1 llGaPgaGKGtqaeklvkkyglahlstGdllRaev.ksgtelGkeakevmdkgelvpdevvvklvkeeleke.....dkkkgfllDGfPRtveqaeale 93 
                 +lG+PgaGKGtq+++lv++y+++hls+GdllRae+ ++g+e G  +k+++++g++vp ev++kl+++++ +      d + +fl+DGfPR+++qa ++e
  KHJ35509.1 110 VLGGPGAGKGTQCARLVRDYKFIHLSAGDLLRAEQdREGSEFGDLIKTYIKEGNIVPMEVTIKLLQKAMIDAvskcsDGNAKFLIDGFPRKMDQALRFE 208
                 79*******************************996789***************************9998765522344679***************** PP

                 HHHHHHTSEESEEEEEE--HHHHHHHHHT.........GSHHHHHHHHHHHHHHHHHHHHHHHHTT CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
         ADK  94 elleeekvkldlvleldvpeevlveRltg.........DneetvkkRletykkqtkplidyykkkg 150
                 e    e+++  +vl ld++ee + +R+++         Dn+e+++kR++t+ ++++p+idy+k ++
  KHJ35509.1 209 E----EICQARIVLFLDCSEEEMQTRVLKrgetsgrtdDNPESIAKRFKTFIETSMPVIDYFKAQN 270
                 9....99*******************************************************9876 PP

>> AAA_17  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  119.6   0.1   5.5e-38   1.2e-34       1     135 [.     111     248 ..     111     249 .. 0.81

  Alignments for each domain:
  == domain 1  score: 119.6 bits;  conditional E-value: 5.5e-38
                 EE-TTSSHHHHHHHHHHHHTEEEEEHHHHHHHHHHTTT.....SHSSHHHHC...TSHHHHHHHHHHHHHHHHHHHH..HSSEEEEEE-SEEEETTEEE CS
      AAA_17   1 lGgPGsGKgtqceklvekygfthlsaGdllreeakrgg.....lakardemr...klpleekkelqkeaaekiaeea..kkkgvlvdghprikeqagfl 89 
                 lGgPG+GKgtqc++lv++y+f hlsaGdllr+e+ r+g     l   + +++    +p+e++ +l+++a+ +   ++  ++ ++l+dg+pr   +++  
  KHJ35509.1 111 LGGPGAGKGTQCARLVRDYKFIHLSAGDLLRAEQDREGsefgdL--IKTYIKegnIVPMEVTIKLLQKAMIDAVSKCsdGNAKFLIDGFPRK--MDQ-A 204
                 7************************************9454332..3334443336788888888888887777777556677*******94..444.4 PP

                 ESSHHHHHHHH..SEEEEEE--HHHHHHHHHHH.TTST-TS-SHHHH CS
      AAA_17  90 dglpkevleelkpdaiilleadpeeilerrlkd.rtrgrdddneesi 135
                  ++++e+++     ++++l++++ee+  r+lk+ +t+gr+ddn esi
  KHJ35509.1 205 LRFEEEICQA---RIVLFLDCSEEEMQTRVLKRgETSGRTDDNPESI 248
                 5799987766...59******************99**********99 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.3   0.0   6.3e-12   1.4e-08       1     124 [.     108     245 ..     108     252 .. 0.80

  Alignments for each domain:
  == domain 1  score: 35.3 bits;  conditional E-value: 6.3e-12
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf.....gvnlrdvakenglllevdpe.aldeskrldedkldklldaleenss..aleegknlvidghlaeleseaa 91 
                 +++ G pG+GK t + +L +  +f     g+ lr     +g+++++  +  ++e +++ ++++ kll++ +  +    ++ +   +idg++ ++ ++ +
  KHJ35509.1 108 VFVLGGPGAGKGTQCARLVRDYKFihlsaGDLLRAEQDREGSEFGDLIKtYIKEGNIVPMEVTIKLLQKAMIDAVskCSDGNAKFLIDGFPRKMDQALR 206
                 7899**************9986667555555555555555555555555999999999999999999988876657766677778**********9999 PP

      AAA_18  92 kdikk......vvLtaspeelleRlekRgyeeakikene 124
                 ++          +L++s+ee+  R+ kRg+++ ++ +n 
  KHJ35509.1 207 FEEEIcqarivLFLDCSEEEMQTRVLKRGETSGRTDDNP 245
                 987779***99*********************9988664 PP

>> Thymidylate_kin  Thymidylate kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.7   0.0   0.00013       0.3       4      56 ..     113     168 ..     111     188 .. 0.76
   2 !   19.1   0.1   3.7e-07   0.00083     108     185 .]     205     288 ..     195     288 .. 0.85

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00013
                      STTSSHHHHHHHHHHHHHHTTE...EEEESSST..TSHHHHHHHHHHHTCS---HHH CS
  Thymidylate_kin   4 lDGaGKttqaellkerlkeegik..vvltrepg..gteiGekirelllkeeeleeqt 56 
                        GaGK tq++ l++ +k  +++   +l+ e++  g+e+G++i+ +++ e ++ ++ 
       KHJ35509.1 113 GPGAGKGTQCARLVRDYKFIHLSagDLLRAEQDreGSEFGDLIKTYIK-EGNIVPME 168
                      569************9998888776677777643389**********9.66665555 PP

  == domain 2  score: 19.1 bits;  conditional E-value: 3.7e-07
                      HHHGGGTTSE-SEEEEEESSHHHHHTSCCTTSS.......TTTSHHHHHHHHHHHHHHHHHHHHTTSTEEEEETTS-HHHHHHHH CS
  Thymidylate_kin 108 lslnedvllkPdltflldvdpevalkRlakrde.......ldeeeeeqldflrkvrerylelakederiliidasksieevheeI 185
                      l+ +e++  +  ++++ld+++e+  +R+ kr+e       + e ++++ +++ ++     + +k+++++++ida ks e+v ++I
       KHJ35509.1 205 LRFEEEIC-QARIVLFLDCSEEEMQTRVLKRGEtsgrtddNPESIAKRFKTFIETSMPVIDYFKAQNKVVTIDARKSPEDVYKDI 288
                      55566666.7789********************99987644488899999999999999999*******************9987 PP

>> AAA_33  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.2   0.0   6.8e-09   1.5e-05       1     137 [.     107     253 ..     107     258 .. 0.71

  Alignments for each domain:
  == domain 1  score: 25.2 bits;  conditional E-value: 6.8e-09
      AAA_33   1 lvllvGlpGsGKstlaerllkklgavllssdtlrrrlfgtdqqskt............dytrvldrlyqilnelarkalsagrnvil..datnls.... 81 
                 +v++ G pG+GK t   rl++  ++++ls  +l+r+   ++                             ++ +++  ++a ++++     +n++    
  KHJ35509.1 107 VVFVLGGPGAGKGTQCARLVRDYKFIHLSAGDLLRAEQDREGSEFGdliktyikegniV----------PMEVTIKLLQKAMIDAVSkcSDGNAKflid 195
                 899*****************************999888765554442333222222221..........223344444444444444444445545555 PP

      AAA_33  82 ..rrerarflklarrlgvpvrivvvetdeetlkeRlakRaangddrsevpeealdrqk 137
                   +r++++ l++ +++  ++ +++++++ee+++ R+ kR +++++  + pe+  +r+k
  KHJ35509.1 196 gfPRKMDQALRFEEEICQARIVLFLDCSEEEMQTRVLKRGETSGRTDDNPESIAKRFK 253
                 6599**********99999999*******************99766666666666655 PP

>> Zeta_toxin  Zeta toxin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.9   0.1   5.3e-06     0.012       8     153 ..      97     241 ..      91     290 .. 0.62

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 5.3e-06
  Zeta_toxin   8 kk.ypsqerPklillgGqpGAGKselaellkdele....rqgnvvrldpDdlRelhPeyeei.lkadpkkaseltqkdaselvekllqeaiengyniiv 100
                 ++ ++s+++P++ +lgG pGAGK++  + l ++ +    ++g+ +r ++D+  + + +  +  +k+      e+t k  ++ +  ++ +  +    +++
  KHJ35509.1  97 STtFTSSKTPVVFVLGG-PGAGKGTQCARLVRDYKfihlSAGDLLRAEQDREGSEFGDLIKTyIKEGNIVPMEVTIKLLQKAMIDAVSKCSDGNAKFLI 194
                 34467889999888876.*****8766655555543666667777766665555554433220233445555555555566666666666677778888 PP

  Zeta_toxin 101 egtlrspdvvkklaealkkaGYevevvvvavkkelSrlgvldRyeeevaegRl 153
                 +g  r+ d++ ++ e++ +      v+++ +++e+ +++vl+R e++   gR 
  KHJ35509.1 195 DGFPRKMDQALRFEEEICQ---ARIVLFLDCSEEEMQTRVLKRGETS---GRT 241
                 8888888888887777766...5667778888888888888888887...554 PP

>> Ploopntkinase3  P-loop Nucleotide Kinase3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0   0.00012      0.26       5      34 ..     107     136 ..     103     159 .. 0.85

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00012
  Ploopntkinase3   5 liylvGqPGaGkstlmaeltkgfdrskveq 34 
                     +++++G PGaGk t  a l + ++ +++++
      KHJ35509.1 107 VVFVLGGPGAGKGTQCARLVRDYKFIHLSA 136
                     79********************99888775 PP

>> dNK  Deoxynucleoside kinase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.1   0.00012      0.26     118     201 ..     209     294 ..     196     297 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00012
                 HHCCH-SEEEEEE--HHHHHHHHHHCTTCCCTTS-HHHHHHHHHHHHHHHTSGGCS........-EEEEETSS.-TTTHCCHHHHHHHHHHH CS
         dNK 118 eelakpdlliYLkasletclerikkRgreeekkieldYlekLhekyeewlkklnev........pvlvidveeldlvaeeekredvveevke 201
                 ee+ +  ++ +L++s e++  r+ kRg++   +   d  e++ +++++++++ + v         v++id+ +      e+ ++d+ e+ +e
  KHJ35509.1 209 EEICQARIVLFLDCSEEEMQTRVLKRGETS--GRTDDNPESIAKRFKTFIETSMPVidyfkaqnKVVTIDARK----SPEDVYKDIQEKLRE 294
                 5666788999*****************999..66678889999999999999444433334455688888887....667777777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (298 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       638  (0.0355848); expected 358.6 (0.02)
Passed bias filter:                      558  (0.0311228); expected 358.6 (0.02)
Passed Vit filter:                        53  (0.0029561); expected 17.9 (0.001)
Passed Fwd filter:                         8  (0.000446204); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               8  [number of targets reported over threshold]
# CPU time: 0.49u 0.23s 00:00:00.72 Elapsed: 00:00:00.39
# Mc/sec: 2300.41
//
Query:       KHJ35510.1  [L=72]
Description: hypothetical protein EV44_g4986 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (72 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       383  (0.021362); expected 358.6 (0.02)
Passed bias filter:                      278  (0.0155056); expected 358.6 (0.02)
Passed Vit filter:                        15  (0.000836633); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.35u 0.23s 00:00:00.57 Elapsed: 00:00:00.39
# Mc/sec: 557.39
//
Query:       KHJ35511.1  [L=133]
Description: hypothetical protein EV44_g3849 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (133 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       284  (0.0158403); expected 358.6 (0.02)
Passed bias filter:                      268  (0.0149478); expected 358.6 (0.02)
Passed Vit filter:                        16  (0.000892409); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.38u 0.23s 00:00:00.61 Elapsed: 00:00:00.38
# Mc/sec: 1048.88
//
Query:       KHJ35512.1  [L=397]
Description: putative dolichyl-phosphate beta-glucosyltransferase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.8e-25   88.3   0.0    7.8e-25   87.6   0.0    1.4  1  Glycos_transf_2  Glycosyl transferase family 2
    3.1e-09   37.1   0.0    1.1e-05   25.4   0.0    2.2  2  Glyco_tranf_2_3  Glycosyltransferase like family 2
  ------ inclusion threshold ------
      0.081   12.4   0.0       0.31   10.5   0.0    1.7  2  Glyco_tranf_2_2  Glycosyltransferase like family 2
       0.13   11.6   0.0        0.2   11.0   0.0    1.1  1  Beta_protein     Beta protein


Domain annotation for each model (and alignments):
>> Glycos_transf_2  Glycosyl transferase family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.6   0.0   1.7e-28   7.8e-25       1     107 [.     111     246 ..     111     304 .. 0.88

  Alignments for each domain:
  == domain 1  score: 87.6 bits;  conditional E-value: 1.7e-28
                      EEEEEESS-TTTHHHHHHHHHHH..........................GGCCEEEEEEEEES-SSCHHHHHGGGCH...C-TTEEEEEESSS- CS
  Glycos_transf_2   1 svviptyNeektlletlesllaq..........................dpypdfeiivvDDgStDetveileelak...edprvrvirreenv 65 
                      svvip+yNee+ l+++le ++a                                +ei++vDDgS+D+tv+++ e+++     + +r++ +++n+
       KHJ35512.1 111 SVVIPAYNEEERLEAMLEEAVAFldseygrvlrpkeksfvgkhqepsswRGMGGYEILIVDDGSKDRTVNVALEFSQkhgLHDIIRICSLKRNR 204
                      8***********************************************9999****************************************** PP

                      HHHHHHHHHHHH--SSEEEEEESSEEE-TTHHHHHHHHHHH. CS
  Glycos_transf_2  66 GkagalnaglraatgdyilflDaDdepdpdwleklvealekd 107
                      Gk+ga+ +glr+++g y lf DaD +    +l+klve  ++ 
       KHJ35512.1 205 GKGGAVTHGLRHVRGAYALFADADGASRFSDLRKLVEGCKEV 246
                      ************************************977763 PP

>> Glyco_tranf_2_3  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.6   0.0   0.00018      0.79       4      26 ..     110     132 ..     106     143 .. 0.85
   2 !   25.4   0.0   2.6e-09   1.1e-05      31     160 ..     164     291 ..     154     300 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.6 bits;  conditional E-value: 0.00018
  Glyco_tranf_2_3   4 lavlVptfneedvlgevleslla 26 
                       +v++p++nee++l+++le+++a
       KHJ35512.1 110 MSVVIPAYNEEERLEAMLEEAVA 132
                      79*****************9986 PP

  == domain 2  score: 25.4 bits;  conditional E-value: 2.6e-09
  Glyco_tranf_2_3  31 rvevvvvvdesdaetlevaeelaaalp..dvrvrvvvnarnlgstgksralnealravksdlvllvDdDtvvePdtlkrllqffltpkvgavgt 122
                       +e+ +v+d+s++ t++va e+ ++++  d+ +r+   +rn g++g   a+ ++lr+v++++ l+ D+D       l++l+     + ++++g 
       KHJ35512.1 164 GYEILIVDDGSKDRTVNVALEFSQKHGlhDI-IRICSLKRNRGKGG---AVTHGLRHVRGAYALFADADGASRFSDLRKLVEGC-KEVADILGR 252
                      58999**********************8554.88887777655555...555*****************888777778888777.777777777 PP

  Glyco_tranf_2_3 123 pvfllnrstl.vsalgalefaerhlrflaarralgvltl 160
                       v    r +l  s +   + + r++ + ++++ l++lt+
       KHJ35512.1 253 AVSIGSRAHLvGSEAVVKRSTLRNILMHSFHLLLRFLTP 291
                      777777777633333333667777777777777777765 PP

>> Glyco_tranf_2_2  Glycosyltransferase like family 2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0      0.21   9.3e+02       1      28 [.     111     136 ..     111     142 .. 0.68
   2 ?   10.5   0.0   6.9e-05      0.31      30      99 ..     165     236 ..     160     263 .. 0.82

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.21
  Glyco_tranf_2_2   1 svviplraseerhyieervlqkakyy.de 28 
                      svvip +++eer    e +l++a  + d 
       KHJ35512.1 111 SVVIPAYNEEER---LEAMLEEAVAFlDS 136
                      89*********9...44444444444365 PP

  == domain 2  score: 10.5 bits;  conditional E-value: 6.9e-05
  Glyco_tranf_2_2  30 ielivvddgSsekfleevssiidlnllv.ylkdeddk.ayslaaarNrGaskaesdlvlFlDaDcfissDkf 99 
                       e+++vddgS + ++++   + ++++l   ++    k   +++ a   G  +  + + lF DaD       +
       KHJ35512.1 165 YEILIVDDGSKDRTVNVALEFSQKHGLHdIIRICSLKrNRGKGGAVTHGLRHVRGAYALFADADGASRFSDL 236
                      589**************99999877654255555555599************************76555555 PP

>> Beta_protein  Beta protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   4.5e-05       0.2      26     136 ..      41     149 ..      40     161 .. 0.86

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 4.5e-05
  Beta_protein  26 ilPlfelppkketpkkklekhldkaldrikeawkrrravflDllddadqltedgrevleellellseegldiiPviqldrddsarlravkkqier.r 121
                   ++P+f +p+ +++  ++++k++++   +  ++++  + ++ D+ +++ +  e++ ++ e+    ++e  +++  vi ++++++ rl+a+ +++ +  
    KHJ35512.1  41 LIPFFLVPK-PRDARPQEKKYITSDPHKGRSSIRSLP-CWYDTWLQQRSAAEKNDNHSEKGTGSIDEPEVEMSVVIPAYNEEE-RLEAMLEEAVAfL 134
                   58*****99.777778999**************9996.*****8888888999999*********999**********99999.8888888877777 PP

  Beta_protein 122 dkfrgvavRldqddf 136
                   d + g ++R ++++f
    KHJ35512.1 135 DSEYGRVLRPKEKSF 149
                   777888888877777 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (397 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       556  (0.0310112); expected 358.6 (0.02)
Passed bias filter:                      491  (0.0273858); expected 358.6 (0.02)
Passed Vit filter:                        44  (0.00245412); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.51u 0.20s 00:00:00.71 Elapsed: 00:00:00.38
# Mc/sec: 3147.13
//
Query:       KHJ35513.1  [L=796]
Description: hypothetical protein EV44_g5772 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (796 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       838  (0.0467399); expected 358.6 (0.02)
Passed bias filter:                      297  (0.0165653); expected 358.6 (0.02)
Passed Vit filter:                        20  (0.00111551); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.62u 0.29s 00:00:00.90 Elapsed: 00:00:00.44
# Mc/sec: 5416.23
//
Query:       KHJ35514.1  [L=307]
Description: putative transmembrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-09   36.2   8.4    1.2e-08   34.9   8.4    1.7  1  bZIP_1      bZIP transcription factor
  ------ inclusion threshold ------
       0.28   11.3   9.2       0.75    9.9   9.2    1.8  1  bZIP_2      Basic region leucine zipper
       0.44   10.7  13.4       0.21   11.7   7.4    2.6  2  SUIM_assoc  Unstructured region C-term to UIM in Ataxin3
        1.3    9.6   5.9       0.28   11.8   1.8    2.0  2  DUF3499     Protein of unknown function (DUF3499)
        5.1    5.5  16.7       0.07   11.7   9.7    1.4  2  Macoilin    Macoilin family


Domain annotation for each model (and alignments):
>> bZIP_1  bZIP transcription factor
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.9   8.4   3.3e-12   1.2e-08       2      47 ..     153     198 ..     152     216 .. 0.87

  Alignments for each domain:
  == domain 1  score: 34.9 bits;  conditional E-value: 3.3e-12
                 XXXXXXXXX--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   2 kelKrekrkqkNReaArrsRqRKqaeieeLerrvkaLekeNksLks 47 
                 +el + kr+++NR a+r++RqRK+ +i++Le++v +L++   sLk 
  KHJ35514.1 153 RELSQSKRAAQNRAAQRAFRQRKEGYIKKLENQVRELNNLDDSLKA 198
                 788899*********************************9999974 PP

>> bZIP_2  Basic region leucine zipper
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   9.2   0.00021      0.75       5      48 ..     156     200 ..     152     215 .. 0.90

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00021
                 XXXXXX.XXXXXXXX-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_2   5 yrerRr.kNreAarrsRekkkakeeeleervkeLeeeNaqLrqkv 48 
                 +  +R  +Nr+A r +R++k  + ++le++v eL++  + L++ +
  KHJ35514.1 156 SQSKRAaQNRAAQRAFRQRKEGYIKKLENQVRELNNLDDSLKASQ 200
                 6789********************************999997765 PP

>> SUIM_assoc  Unstructured region C-term to UIM in Ataxin3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   7.4   5.9e-05      0.21      26      56 ..      33      90 ..      25     101 .. 0.62
   2 ?    2.0   0.3      0.06   2.1e+02      19      30 ..     171     188 ..     157     259 .. 0.75

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 5.9e-05
  SUIM_assoc 26 YFEK...........................qeqqqqqqqqqqdppgqlshprekptt 56
                Y E                            ++q qq+qq qq++++q sh +   tt
  KHJ35514.1 33 YHEAqanttplqemsvdndlralaavistgqHQQPQQHQQSQQQQQQQHSHSHASHTT 90
                5555555555556666666666666666665455566666666666666666655555 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.06
  SUIM_assoc  19 LrkrreaYFEK......q 30 
                  r+r+e Y  K      +
  KHJ35514.1 171 FRQRKEGYIKKlenqvrE 188
                 699*****9993333330 PP

>> DUF3499  Protein of unknown function (DUF3499)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   1.8   7.7e-05      0.28      67     109 ..      44      85 ..      17     106 .. 0.66
   2 ?   -1.4   0.1      0.94   3.4e+03     113     115 ..     173     175 ..     144     210 .. 0.54

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 7.7e-05
     DUF3499  67 eaepdeddlvALAdavreaaeeereeeaepepaeeakreeeek 109
                 ++ + ++dl ALA  +  +++++ +++++++++++++++ +++
  KHJ35514.1  44 QEMSVDNDLRALAAVISTGQHQQPQQHQQSQQQQQQQHS-HSH 85 
                 6677899******99988775554444444333333333.222 PP

  == domain 2  score: -1.4 bits;  conditional E-value: 0.94
     DUF3499 113 srr 115
                 +r+
  KHJ35514.1 173 QRK 175
                 222 PP

>> Macoilin  Macoilin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   9.7   1.9e-05      0.07     280     428 ..      61     202 ..       5     225 .. 0.53
   2 ?   -3.7   0.6      0.89   3.2e+03     366     367 ..     278     279 ..     234     301 .. 0.39

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 1.9e-05
    Macoilin 280 dsklqekeymenkskskrlsksessgsesellveesvkskssssssssnknskkasagsagssnssskkhsessksvtsssssknskkqklpaGkssaa 378
                   ++q+ + +++  ++++ ++s+s++s++++ v+++++s++s++ ++  +    a++g+a+s    + + s+ ++   s+  + + + +k++  ++ ++
  KHJ35514.1  61 TGQHQQPQQHQQSQQQQQQQHSHSHASHTTTFVDNQASSNTSAHDNNIDPAIGGAASGNANSLMMVPVSGSSGNGGGESGGDDIS-DGRKIA-KRELSQ 157
                 2344444445555555555566677777788888888888777777777777777777777766666666666665555443333.233332.333444 PP

    Macoilin 379 lkdaaenslpnnqlskkdalvrLeadikkLkaeLqasrqteqelrskiss 428
                 +k aa     +n+++++    r e+ ikkL  ++++  + ++ l+     
  KHJ35514.1 158 SKRAA-----QNRAAQRAFRQRKEGYIKKLENQVRELNNLDDSLKASQAE 202
                 44444.....4444444444455555555555555554444444432222 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 0.89
    Macoilin 366 kk 367
                 +k
  KHJ35514.1 278 NK 279
                 11 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (307 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      2841  (0.158458); expected 358.6 (0.02)
Passed bias filter:                      730  (0.0407162); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        13  (0.000725082); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.63u 0.27s 00:00:00.90 Elapsed: 00:00:00.42
# Mc/sec: 2192.88
//
Query:       KHJ35515.1  [L=129]
Description: putative profilin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.1e-42  145.3   0.0    1.2e-42  145.2   0.0    1.0  1  Profilin  Profilin


Domain annotation for each model (and alignments):
>> Profilin  Profilin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  145.2   0.0   6.7e-47   1.2e-42       1     127 []       1     129 []       1     129 [] 0.99

  Alignments for each domain:
  == domain 1  score: 145.2 bits;  conditional E-value: 6.7e-47
                 HHHHHHHHCCCHHCSSESEEEEEETTSSSEEEEETTGG--HHHHHHHHHHHH..STCHHHHH-EEETTEEEEEEEEETTEEEEEETTEEEEEEE-SSEE CS
    Profilin   1 msWqayvdesllgtgkvdkAaIigadggsvwaasegfkvtpeevkaivkafk..dpsklqsnGvtiggekYlviraddesiygkkgkegvvivktkqal 97 
                 msWq+y+d sl+g+g vd A I+g +++++wa+s+gf+v+p+e++ iv+ +k  + +kl+++G++++ge+Y+ ++++d+s+ g+kg+egvvivk+k a+
  KHJ35515.1   1 MSWQTYIDVSLVGSGRVDLASIVGFEDKKIWASSPGFEVSPDEINVIVEGLKqtNLDKLRADGFYVAGERYVLTKSEDRSLIGRKGQEGVVIVKSKMAV 99 
                 9***************************************************978******************************************** PP

                 EEEEE-TTS-HHHHHHHHHHHHHHHHHCT- CS
    Profilin  98 viavydegvqpgnankavekladyLisagy 127
                 +i++y++++ +gn++ +ve ladyL+++gy
  KHJ35515.1 100 LIGHYNKDMIAGNCSITVEGLADYLEKQGY 129
                 *****************************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (129 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       420  (0.0234257); expected 358.6 (0.02)
Passed bias filter:                      376  (0.0209716); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.37u 0.22s 00:00:00.59 Elapsed: 00:00:00.36
# Mc/sec: 1063.29
//
Query:       KHJ35516.1  [L=216]
Description: putative pterin-4-alpha-carbinolamine dehydratase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    3.9e-24   84.6   0.0    6.5e-24   83.9   0.0    1.4  1  Pterin_4a  Pterin 4 alpha carbinolamine dehydratase


Domain annotation for each model (and alignments):
>> Pterin_4a  Pterin 4 alpha carbinolamine dehydratase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.9   0.0   3.6e-28   6.5e-24      17      90 ..      99     173 ..      83     174 .. 0.91

  Alignments for each domain:
  == domain 1  score: 83.9 bits;  conditional E-value: 3.6e-28
   Pterin_4a  17 gWrle.eaeelerefkfkdfeeaiafvnrvaalaeeenHhpdilvsynkvtvrltThdaggltenDfklAakide 90 
                 +W  + +a+ +er+fkfk f++a+af+n vaa + ++nHhp++++ yn+v +r+tTh+  gl+e D+k+A+ +d+
  KHJ35516.1  99 RWAISaDARGIERSFKFKGFKKAWAFMNIVAAESVQKNHHPEWSNIYNTVFIRWTTHSPIGLSELDIKIAQYCDD 173
                 7995458889**************************************************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (216 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       532  (0.0296726); expected 358.6 (0.02)
Passed bias filter:                      329  (0.0183502); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.21s 00:00:00.60 Elapsed: 00:00:00.35
# Mc/sec: 1838.13
//
Query:       KHJ35517.1  [L=405]
Description: putative serine threonine protein kinase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
  ------ inclusion threshold ------
      0.013   15.3   0.1      0.033   14.0   0.1    1.7  1  gag_pre-integrs  GAG-pre-integrase domain


Domain annotation for each model (and alignments):
>> gag_pre-integrs  GAG-pre-integrase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   0.1   1.8e-06     0.033      27      66 ..     345     382 ..     337     383 .. 0.80

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 1.8e-06
  gag_pre-integrs  27 WHrRLGHpsfsrlkkLfkkgllpglkisksevCeaCqlgK 66 
                      WH+ LGHp+ ++ +   k+  + + k    + Ce+C + K
       KHJ35517.1 345 WHSILGHPGQKAQNAALKSAGIVKYK--FPSDCEICTKVK 382
                      ************99999974444434..4679****8876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (405 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       627  (0.0349713); expected 358.6 (0.02)
Passed bias filter:                      532  (0.0296726); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.51u 0.23s 00:00:00.74 Elapsed: 00:00:00.41
# Mc/sec: 2982.36
//
Query:       KHJ35518.1  [L=1982]
Description: putative activating signal cointegrator 1 complex subunit 3 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
   1.8e-129  430.4   7.2    5.6e-77  258.4   1.7    2.3  2  Sec63         Sec63 Brl domain
    2.1e-50  171.0   0.5    1.4e-25   90.1   0.6    2.9  2  DEAD          DEAD/DEAH box helicase
    4.7e-27   95.1   0.0    1.8e-12   47.6   0.2    2.5  2  ResIII        Type III restriction enzyme, res subunit
    7.5e-16   58.5   0.2    5.8e-06   26.6   0.0    5.1  3  Helicase_C    Helicase conserved C-terminal domain
    8.3e-09   35.8   0.0     0.0043   17.3   0.0    3.1  2  AAA_22        AAA domain
    1.5e-07   31.9   0.3    0.00011   22.6   0.2    2.6  2  AAA_19        AAA domain
    3.8e-07   30.0   0.0      0.018   14.7   0.0    2.4  2  AAA_30        AAA domain
    0.00031   20.9   0.1     0.0008   19.6   0.1    1.8  1  Helicase_PWI  N-terminal helicase PWI domain
     0.0064   15.6   0.0        3.1    6.8   0.0    2.4  2  T2SSE         Type II/IV secretion system protein
  ------ inclusion threshold ------
      0.059   13.1   0.3         15    5.3   0.0    3.4  4  IstB_IS21     IstB-like ATP binding protein


Domain annotation for each model (and alignments):
>> Sec63  Sec63 Brl domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  258.4   1.7   3.1e-80   5.6e-77       2     257 .]     797    1108 ..     796    1108 .. 0.97
   2 !  174.9   0.3   9.3e-55   1.7e-51       1     251 [.    1643    1955 ..    1643    1959 .. 0.92

  Alignments for each domain:
  == domain 1  score: 258.4 bits;  conditional E-value: 3.1e-80
                  CHHHHHHHHHT--HHHHHHHHHHS-TT--HHHHHHHHHTSGGGGGS---TTHHHHHHHHH.HTSSS--.......SSSTTSHHHHHHHHHHHHHTT- CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxx.......xxxxxxxxxxxxxxxxxxxxxx RF
       Sec63    2 telGriaShYyisyetiklfneslkpnttlkdlLeilssasEFeeipvReeEkkelkkLl.ekvpikv.......kediespeaKvniLlqayisrl 90  
                  +++GriaS++yi+y++i++fn+ ++p  +++d+L+++s+++EF++i+ R++E +elk+L+ +++p+ +       k++i  p++K+niLlq+ isr 
  KHJ35518.1  797 KDVGRIASQFYIRYTSIEIFNNLMSPLASEADILSMISMSAEFDNIQSRDNETEELKELKeKHAPCAIksetpnpKTNILLPNVKTNILLQSLISRA 893 
                  689*********************************************************55688888888887669******************** PP

                  --SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHTS-TT.......................................... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......................................... RF
       Sec63   91 klegsdlvsDlkyilqnairilralveillskgwlslalslleLskmveqrlwds.......................................... 145 
                  ++++++l++D +yi+q+  ri+r l+ i+l++ w   +l ll+L+k++e+rlw+                                           
  KHJ35518.1  894 NIQDFALMNDSEYIAQQSARICRGLYMIALNRHWGYQCLVLLSLCKSIEKRLWSYqhplhqfelpksvlkhldskgntsietlrdmdaseigslvhn 990 
                  *****************************************************8889**************************************** PP

                  .............S--EEEEEEECEBTTSEEEEEEEEEESSSS-SCTSSS-CH..TSBEEEEEEEEETTTTEEEEEEEEEESSTTTTTEEEEEEEEE CS
                  .............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63  146 .............lPkleieaevqpitrsklrvevtiereeeeskpdfpwdkk..gksekfwlvvedsendellaikrvtlekkklastqevkleft 227 
                               +P++++e e+ p+ r++l++++ +        p+f+w++k   +se+fw++ve+se++e++++++++l++kk +  + ++l+ft
  KHJ35518.1  991 fsegktirkllknFPTINVESEIAPLNRDILKIRLYLI-------PEFTWNDKyhMNSESFWVWVENSETSEIYHHEYFILSRKKFH--DDHQLDFT 1078
                  **************************************.......************************************998665..69****** PP

                  EE-.SSCCEEEEEEEEESSSSS-EEEEEEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63  228 vplsepgpkqltvrlisdswlgldqevtis 257 
                  +pl +p+p+q++vr++sd+wlg+++ ++is
  KHJ35518.1 1079 IPLLDPLPTQIYVRVVSDRWLGAETVHPIS 1108
                  **************************9986 PP

  == domain 2  score: 174.9 bits;  conditional E-value: 9.3e-55
                  ECHHHHHHHHHT--HHHHHHHHHHS-TT--HHHHHHHHHTSGGGGGS---TTHHHHHHHHHHTSSS--...S.SSTTSHHHHHHHHHHHHHTT---S CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...x.xxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63    1 ptelGriaShYyisyetiklfneslkpnttlkdlLeilssasEFeeipvReeEkkelkkLlekvpikv...k.ediespeaKvniLlqayisrlkle 93  
                  pt lG+i+S+Yyis+ ti+ ++e+ kpn + +d+ + +ssa+E++e+pvR++E+  +++L  ++p++    k   + +p+ K+++Llqa+isr++l+
  KHJ35518.1 1643 PTSLGKIMSYYYISHHTIRYISENAKPNASFADVASWMSSATEYDELPVRHNEEFLNAELSRNLPLSTdsfKsLPMWDPHIKAFLLLQAHISRIDLP 1739
                  79*****************************************************************9655258889******************** PP

                  SHHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHTS-TT............................................. CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............................................. RF
       Sec63   94 gsdlvsDlkyilqnairilralveillskgwlslalslleLskmveqrlwds............................................. 145 
                    d+v D++++l++ iri++a++++l++ g+ls +l++++L ++++ ++w++                                             
  KHJ35518.1 1740 ITDYVGDQTSVLDQSIRIIQATIDVLAEMGYLSSVLQIITLLQSIKCARWPTdnplsilpgievdsiveknlpqtlqdlssasderrqklinslnip 1836
                  **************************************************999******************************************** PP

                  .............S--EEEEEEECEBTTSEEEEEEEEEESSS....S-S....CTSSS-CHTSBEEEEEEEEETTTTEEEEEEEEEESSTTTTTEEE CS
                  .............xxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63  146 .............lPkleieaevqpitrsklrvevtiereee....esk....pdfpwdkkgksekfwlvvedsendellaikrvtlekkklastqe 221 
                               +P+l+i    ++i  s+l+++++i+r+++      +    p+fp+++   +e+  ++v  +++de++a+krv  + ++ + ++ 
  KHJ35518.1 1837 vetinpftkaanmIPNLDI----KVINISVLTLTIEISRKNSfthsG-NkmyaPFFPKSQ---TEGYIVIVCCEKKDEVIALKRVGWSSDSGRPSTM 1925
                  ********99999999999....899999*********888887552.15799*******...*********************9997654433666 PP

                  EEEEEEEE-.SSCCEEEEEEEEESSSSS-E CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       Sec63  222 vkleftvplsepgpkqltvrlisdswlgld 251 
                  v++++  +  + g++++ ++++sd +l++ 
  KHJ35518.1 1926 VTFQLPEEAIQDGSDNVDIWVLSDGYLNMI 1955
                  6666666666679**************985 PP

>> DEAD  DEAD/DEAH box helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.1   0.6   7.5e-29   1.4e-25       2     172 ..     286     471 ..     285     475 .. 0.85
   2 !   77.4   0.0   6.2e-25   1.1e-21       2     167 ..    1153    1315 ..    1152    1322 .. 0.86

  Alignments for each domain:
  == domain 1  score: 90.1 bits;  conditional E-value: 7.5e-29
                 HHHHHHHHHHH.TTCEEEEEESTTSSHHHHHHHHHHHHHHHS...............TTSTS-EEEEEESSHHHHHHHHHHHHHHTTTSTSEEEEEETT CS
                 xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   2 diQaeaiplil.gggdvlvaaeTGsGKTlaflipvlqivyet...............kgktgpkalivePtreLaeqtlnnlkkfkkyidlrvlliigg 84 
                 ++Q+ ++p ++ + +++l++a+TG+GKT  +++ +l+++ ++                + +  k+++v+P+++La ++ ++++++++ +++++   +g 
  KHJ35518.1 286 RMQSLVYPVAYqTSENMLICAPTGAGKTDTAMLTILHTIGQNtepkpaedpsnvdfaVNLEDFKIIYVAPMKALAAEITQKFSNRLSWLGISTREYTG- 383
                 679999999994557*********************99977677766666666666556666**************************9977775555. PP

                 SSHHHHHHHHHTTCSEEEEEHHHHHHHH..HCTSSH.CTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEESSBSHH CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD  85 vaardqlskldngvdivvgtpgrlddll..stgkln.lsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSATlpkd 172
                  + +  ++++ ++++i+v+tp+++d ++  stg  + +++v++l++DE+++l d+ ++  +++++++++++ +++++  +++ lSATlp+ 
  KHJ35518.1 384 -DIHLTKKEI-QQTQIIVTTPEKWDVITrkSTGDTElVQKVKLLIIDEVHMLHDD-RGSVLESLIARTQRQVESTQSLIRIVGLSATLPNY 471
                 .455678888.899***********9998877777779****************8.************999999887778********954 PP

  == domain 2  score: 77.4 bits;  conditional E-value: 6.2e-25
                  HHHHHHHHHHH.TTCEEEEEESTTSSHHHHHHHHHHHHHHHSTTSTS-EEEEEESSHHHHHHHHHHHHHHTTT.STSEEEEEETTSSHHHHHHHHHT CS
                  xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD    2 diQaeaiplil.gggdvlvaaeTGsGKTlaflipvlqivyetkgktgpkalivePtreLaeqtlnnlkkfkky.idlrvlliiggvaardqlskldn 96  
                  ++Q +++++++ +  +vl+  +TGsGKT a  +++  ++   ++ +g k+++++P+++L+++ +++++ ++   ++l+++ ++g +  + + + + +
  KHJ35518.1 1153 PMQTQIFHCLYhTPTNVLLGSPTGSGKTIACELAMWWAF---REHKGSKVIYIAPMKALVRERVKDWRARITSqMNLKLVELTG-DI-TPDTRSI-R 1243
                  789999999994457*********************888...579999********************9999767788875555.44.4566777.7 PP

                  TCSEEEEEHHHHHHHH...HCTSSHCTTEEEEEEETHHHHHHTTTHHHHHHHHHHSHHHCTTSTTTSEEEEEES CS
                  xxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
        DEAD   97 gvdivvgtpgrlddll...stgklnlsqvrflVlDEadrlldqgfsdfinrilnqlpqitcdgklqrqvivlSA 167 
                  ++di+v+tp+++d +     t+k  ++qv+++++DE++ l  + +++ ++ i+++++ i ++ +++ ++i +S 
  KHJ35518.1 1244 EADIIVTTPEKWDGISrgwATRK-YVQQVSLVIIDEIHLLGGD-RGPILEIIVSRMNYIATQSSNSIRIIGMST 1315
                  9*************988874444.5*****************8.*************99999999999998885 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.6   0.2     1e-15   1.8e-12      21     170 ..     286     469 ..     248     470 .. 0.84
   2 !   44.5   0.0   8.7e-15   1.6e-11      22     166 ..    1164    1314 ..    1127    1318 .. 0.77

  Alignments for each domain:
  == domain 1  score: 47.6 bits;  conditional E-value: 1e-15
                 ............TTSEEEEEESTTSTHHHHHHHHHHHH-S.......................-EEEEESSHHHHHHHHHHGGGGTGG....GEEEESS CS
      ResIII  21 s..........krdkrglikmaTGtGKTlvaaklierllkkgkee..................kflflvprkslleqtleefkkflseaykeigkkvsg 91 
                            +  +++li ++TG+GKT +a+ +i +   ++ e                   k++ ++p k+l     ++f++ ls      + +++g
  KHJ35518.1 286 RmqslvypvayQTSENMLICAPTGAGKTDTAMLTILHTIGQNTEPkpaedpsnvdfavnledfKIIYVAPMKALAAEITQKFSNRLSWLG-ISTREYTG 383
                 044456666656778999*************999999999988889***************************************99864.47888999 PP

                 S-B--.......-SEEEEEHHHHHHTH........HHHTTT-SEEEEETGGGTTS......T.....TTHHHHHT---SEEEEEESS-S CS
      ResIII  92 dkkkakekdstnkkilvttiqsldadseeeeeeseellrdrfdviiiDEaHrlgak.....k.....swreilekfkeavllglTATpe 170
                 d +   +k++++++i+vtt ++ d +   ++++ ++ l ++ +++iiDE+H l+++     +     + r++    +   ++gl+AT++
  KHJ35518.1 384 DIHLT-KKEIQQTQIIVTTPEKWDVIT--RKSTGDTELVQKVKLLIIDEVHMLHDDrgsvlEsliarTQRQVESTQSLIRIVGLSATLP 469
                 99998.999*****************9..45566667778888************86655515666577778777777999******86 PP

  == domain 2  score: 44.5 bits;  conditional E-value: 8.7e-15
                  .TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEEEESSHHHHHHHHHHGGGGTGG........GEEEESSS-B--.......-SEEEEEHHHH CS
      ResIII   22 krdkrglikmaTGtGKTlvaaklierllkkgkeekflflvprkslleqtleefkkflseayke....igkkvsgdkkkakekdstnkkilvttiqsl 114 
                  +  +++l+  +TG+GKT+ +  +++  ++++k +k++ ++p k+l+    ++++  + ++ +      +++++ d      +++ +++i+vtt ++ 
  KHJ35518.1 1164 HTPTNVLLGSPTGSGKTIACELAMWWAFREHKGSKVIYIAPMKALVRERVKDWRARITSQMNLklveLTGDITPD-----TRSIREADIIVTTPEKW 1255
                  6788999*************88888888888999*************9999999998888665344444444444.....55559************ PP

                  HHTH........HHHTTT-SEEEEETGGGTTS..........TTTHHH.HHT---SEEEEEE CS
      ResIII  115 dadseeeeeeseellrdrfdviiiDEaHrlgak.........kswrei.lekfkeavllglT 166 
                  d +s   + + +++  ++  ++iiDE H lg++         + ++ i  ++ ++  ++g++
  KHJ35518.1 1256 DGIS---RGWATRKYVQQVSLVIIDEIHLLGGDrgpileiivSRMNYIaTQSSNSIRIIGMS 1314
                  ****...99*********************99855554444336666634444446666765 PP

>> Helicase_C  Helicase conserved C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0   3.5e-08   6.2e-05      41     109 ..     595     673 ..     522     675 .. 0.71
   2 ?    1.3   0.1      0.24   4.3e+02      12      44 ..     777     811 ..     767     821 .. 0.73
   3 !   26.6   0.0   3.2e-09   5.8e-06      35     109 ..    1420    1516 ..    1367    1518 .. 0.65

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 3.5e-08
                 STEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEEESSSSSSH..........HHHHHHHTTSSS CS
  Helicase_C  41 ikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVinfdlprnv..........tsyiqriGRtgR 109
                   + ++h+ +   +r  i + f +g  +vL +t  ++ G+++p + +Vi     ++            +++q  GR+gR
  KHJ35518.1 595 KGMGIHHAGMARADRSLIAKLFARGVLKVLCCTATLAWGVNLPAAAVVIKGTQVYSAqdgkfidlsiLDVHQIFGRAGR 673
                 445679999****************************************766664433444445555***********9 PP

  == domain 2  score: 1.3 bits;  conditional E-value: 0.24
                 HTTTTSEEEEEESSHHHHHH..HHHHHHHTTSTEE CS
  Helicase_C  12 leeeggkilifvntidrlek..vklllekkgikva 44 
                 ++ ++++++if +t+d+l +  v  + +++ i+++
  KHJ35518.1 777 RTLRNNQMIIFNETTDELRSkdVGRIASQFYIRYT 811
                 567999**********7755556666666666555 PP

  == domain 3  score: 26.6 bits;  conditional E-value: 3.2e-09
                  H............HHHTTSTEEEESTTSTHHHHHHHHHHHHTTSSSEEEESGGGTSSSTSTTESEEE....ESSSS......SSHHHHHHHHTTSSS CS
  Helicase_C   35 l............lekkgikvavlhgelpqnereeileqfnkgesdvLiatdvaerGidipkvnlVi....nfdlp......rnvtsyiqriGRtgR 109 
                  l            +e+  + +  +h+ l  ++r  + e f ++++++Liat+ ++ G+++p   +V+     +d++       ++t++ q+ GR+gR
  KHJ35518.1 1420 LqmnlsrikddalKESLTFGIGLHHAGLVESDRSIAEELFINNKIQILIATSTLAWGVNLPAHLVVVkgtqYYDAKiegyrdMDLTDVLQMLGRAGR 1516
                  03333333333325555899999**************************************555555555555555777744447************ PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.8   0.1   1.5e-05     0.026       7     115 ..     301     447 ..     296     463 .. 0.66
   2 !   17.3   0.0   2.4e-06    0.0043      13     128 ..    1174    1311 ..    1164    1319 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 1.5e-05
      AAA_22   7 ilvvtGesGtGKT.tllrrlleqldeeakaee.erpevv..fvtlpsst.....sskdllrellralglelka.................erlsseell 79 
                  +++++++G+GKT t + ++l++  +  +++  e+p+ v   v+l   +       k l+ e+ +++ ++l+                  e ++++ ++
  KHJ35518.1 301 NMLICAPTGAGKTdTAMLTILHTIGQNTEPKPaEDPSNVdfAVNLEDFKiiyvaPMKALAAEITQKFSNRLSWlgistreytgdihltkkEIQQTQIIV 399
                 689**********66667777777666666669555555555555555555555555555555555555555566666666666666655344444444 PP

      AAA_22  80 ..ealeqalrarav........ielliiDEaqhlr..seealeeLrsl 115
                      ++ + ++++        ++lliiDE++ l   +  +le L  +
  KHJ35518.1 400 ttPEKWDVITRKSTgdtelvqkVKLLIIDEVHMLHddRGSVLESLIAR 447
                 36778888888888999999999***********66558888888444 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 2.4e-06
      AAA_22   13 esGtGKTtllrrlleqldeeakaeeerpevv...fvtlpsstsskdllrellralglelka....................erlsseellealeqal 86  
                  ++G+GKT  ++  + ++    + e+++++v+    +++ + +  kd + ++ ++++l+l +                     + + + +        
  KHJ35518.1 1174 PTGSGKTIACELAMWWA----FREHKGSKVIyiaPMKALVRERVKDWRARITSQMNLKLVEltgditpdtrsireadiivtTPEKWDGIS------- 1259
                  89********9999987....56667888883345555555599*********************9999977766665554222222222....... PP

      AAA_22   87 rarav..........ielliiDEaqhlr..seealeeLrsllnl....srkgvqliLv 128 
                      +          ++l+iiDE++ l   +  +le ++s++n     s+ ++++  +
  KHJ35518.1 1260 ----RgwatrkyvqqVSLVIIDEIHLLGgdRGPILEIIVSRMNYiatqSSNSIRI--I 1311
                  ....2333344445567**********7766************998544444444..4 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.2   6.1e-08   0.00011       8     129 ..     297     448 ..     293     463 .. 0.79
   2 !    6.6   0.0    0.0053       9.5       8     112 ..    1164    1280 ..    1155    1300 .. 0.72

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 6.1e-08
      AAA_19   8 lkekvllvtaGpGtGKTrvlkhivallvelggvkp................eeillvaftgrAakelrerlaalgae.....atTiHrlalldfddllt 85 
                  +++++l+ a+ G GKT + +  + + + +++++                  +i+ va+ +  a e++++ ++   +     ++T  + + +++++++ 
  KHJ35518.1 297 QTSENMLICAPTGAGKTDTAMLTILHTIGQNTEPKpaedpsnvdfavnledFKIIYVAPMKALAAEITQKFSN---RlswlgISTREYTGDIHLTKKEI 392
                 56889************99988888777777665569*******************************98833...23357788888887777777776 PP

      AAA_19  86 ealelle............eaeeekklqeeellivDEfqdvdelqyrLlkallgek 129
                 ++ +++             ++ +++ +q+ +lli+DE+ ++ +   ++l+ l  ++
  KHJ35518.1 393 QQTQIIVttpekwdvitrkSTGDTELVQKVKLLIIDEVHMLHDDRGSVLESLIART 448
                 6666666788899999985555556665555***********99988888887554 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0053
      AAA_19    8 lkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgaeatTiHrlalldfddlltealelle............ 92  
                  ++ +++l+  + G+GKT   + ++ ++ ++++    +++ +a+ +     +rer++   a++t   +l l+++++++t     ++            
  KHJ35518.1 1164 HTPTNVLLGSPTGSGKTIACELAMWWAFREHKG--SKVIYIAPMKA---LVRERVKDWRARITSQMNLKLVELTGDITPDTRSIReadiivttpekw 1255
                  555667777778****98888888888877755..89999999753...356777777888888777777777777777777777777777777777 PP

      AAA_19   93 .....eaeeekklqeeellivDEfq 112 
                         +++k +q+  l+i+DE+ 
  KHJ35518.1 1256 dgisrGWATRKYVQQVSLVIIDEIH 1280
                  7777644566777555699999975 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.0     1e-05     0.018      15     106 ..     297     439 ..     283     463 .. 0.67
   2 !   12.8   0.0   4.1e-05     0.073       3     100 ..    1152    1282 ..    1150    1291 .. 0.71

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1e-05
      AAA_30  15 tsgdrvavltGpAGtGKt.talkalreaweaag...................grviglAptgkaAkvLae.......elgieastiakllkrlk..... 81 
                 +++   +++ +p G+GKt ta+ ++ +++ ++                    +++i +Ap ++ A+++++        lgi ++     ++ +k     
  KHJ35518.1 297 QTS-ENMLICAPTGAGKTdTAMLTILHTIGQNTepkpaedpsnvdfavnledFKIIYVAPMKALAAEITQkfsnrlsWLGISTREYTGDIHLTKkeiqq 394
                 333.368999*******97666666666666644899*******************************9633333333333333333333333344556 PP

      AAA_30  82 ....................grarlepg.tllivDEagmvdtkqla 106
                                     + ++l ++ +lli+DE+ m+  +   
  KHJ35518.1 395 tqiivttpekwdvitrkstgD-TELVQKvKLLIIDEVHMLHDDRGS 439
                 6677778888888888***64.5566666**********9654433 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 4.1e-05
      AAA_30    3 naeQaaavealltsgdrvavltGpAGtGKttalkal..reaweaaggrviglAptgkaAkv.Lae.elgieastiakllkrlk.............. 81  
                  n+ Q +++  l +++   ++l  p G+GKt a + +   +  e++g +vi +Ap ++  ++ +++  + i+++   kl++ ++              
  KHJ35518.1 1152 NPMQTQIFHCLYHTPT-NVLLGSPTGSGKTIACELAmwWAFREHKGSKVIYIAPMKALVRErVKDwRARITSQMNLKLVELTGditpdtrsireadi 1247
                  6778888887777775.56666788*******9988534555555***********99988577432234454444555444466777777777777 PP

      AAA_30   82 ................grarlepgtllivDEagmv 100 
                                   r+ +++ +l+i+DE+ ++
  KHJ35518.1 1248 ivttpekwdgisrgwaTRKYVQQVSLVIIDEIHLL 1282
                  777777777888899765667777*******9776 PP

>> Helicase_PWI  N-terminal helicase PWI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.6   0.1   4.5e-07    0.0008       9      77 ..      90     159 ..      82     191 .. 0.84

  Alignments for each domain:
  == domain 1  score: 19.6 bits;  conditional E-value: 4.5e-07
  Helicase_PWI   9 eidafWLqrelkkiykDae..eaqelaeevleiLkseadelrelEnkLvelldydkfdliklllknrekiv 77 
                   +  + WL+ ++++  k ++  +a++++ +++ +L s+++e  elE+ L ++++ d fd+i  ++++r +i 
    KHJ35518.1  90 SFGSQWLESRCHDLAKRSKgfTAEDIKGRIIALLVSDSSE-EELESMLTDVIGLDDFDFIIDIITHRSEIK 159
                   56689*******99995554599**************777.**************************9995 PP

>> T2SSE  Type II/IV secretion system protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.8   0.0    0.0017       3.1     127     169 ..     297     339 ..     259     350 .. 0.76
   2 !    6.2   0.0    0.0027       4.8      97     147 ..    1137    1184 ..    1126    1202 .. 0.77

  Alignments for each domain:
  == domain 1  score: 6.8 bits;  conditional E-value: 0.0017
       T2SSE 127 rerglilvsGgTgsGKt.tllyallkeinksderivtvEDpvEi 169
                 ++  ++l+  +Tg GKt t + ++l++i ++  +   +EDp  +
  KHJ35518.1 297 QTSENMLICAPTGAGKTdTAMLTILHTIGQN-TEPKPAEDPSNV 339
                 45789************44558999999888.666677777665 PP

  == domain 2  score: 6.2 bits;  conditional E-value: 0.0027
       T2SSE   97 kksakeltlddlgaeealkekiaevlrkavrerglilvsGgTgsGKttlly 147 
                  +++ +e+  +++++ + ++ +i + l +      ++l+  +TgsGKt+   
  KHJ35518.1 1137 NPALEEIYGQKFQYFNPMQTQIFHCLYHT---PTNVLLGSPTGSGKTIACE 1184
                  55566666677777777778888888777...89*************9875 PP

>> IstB_IS21  IstB-like ATP binding protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.3   0.0    0.0083        15      44      64 ..     296     316 ..     275     328 .. 0.79
   2 ?   -0.8   0.1      0.61   1.1e+03     106     122 ..     419     435 ..     410     452 .. 0.74
   3 ?    3.0   0.0      0.04        72      48      87 ..    1167    1209 ..    1154    1229 .. 0.75
   4 ?   -3.5   0.0       4.1   7.3e+03     106     120 ..    1268    1282 ..    1263    1287 .. 0.78

  Alignments for each domain:
  == domain 1  score: 5.3 bits;  conditional E-value: 0.0083
   IstB_IS21  44 iekkenivllGpsGvGKshla 64 
                  +++en++++ p+G+GK+  a
  KHJ35518.1 296 YQTSENMLICAPTGAGKTDTA 316
                 4789*************9766 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.61
   IstB_IS21 106 llkvdllilDdlgllpl 122
                 ++kv+lli+D++ +l+ 
  KHJ35518.1 419 VQKVKLLIIDEVHMLHD 435
                 6799*******976653 PP

  == domain 3  score: 3.0 bits;  conditional E-value: 0.04
   IstB_IS21   48 enivllGpsGvGKshlaialgve.avr..aglsvlfvr.vedLv 87  
                   n++l  p+G GK+ +a+ l++  a r  +g +v+++  +++Lv
  KHJ35518.1 1167 TNVLLGSPTGSGKT-IACELAMWwAFRehKGSKVIYIApMKALV 1209
                  6899999******9.89999985255555788999875245555 PP

  == domain 4  score: -3.5 bits;  conditional E-value: 4.1
   IstB_IS21  106 llkvdllilDdlgll 120 
                  +++v+l+i+D++ ll
  KHJ35518.1 1268 VQQVSLVIIDEIHLL 1282
                  56889******9775 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1982 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       547  (0.0305092); expected 358.6 (0.02)
Passed bias filter:                      455  (0.0253779); expected 358.6 (0.02)
Passed Vit filter:                        46  (0.00256568); expected 17.9 (0.001)
Passed Fwd filter:                        10  (0.000557756); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              10  [number of targets reported over threshold]
# CPU time: 1.05u 0.30s 00:00:01.35 Elapsed: 00:00:00.46
# Mc/sec: 12873.23
//
Query:       KHJ35519.1  [L=496]
Description: putative squalene epoxidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
     6e-100  333.8   0.0   8.2e-100  333.4   0.0    1.2  1  SE              Squalene epoxidase
    3.1e-09   36.6   0.3    7.1e-08   32.1   0.3    2.4  1  FAD_binding_3   FAD binding domain
      1e-08   35.2   0.0    7.3e-07   29.1   0.0    2.1  2  DAO             FAD dependent oxidoreductase
    8.3e-05   22.7   0.2    0.00018   21.7   0.2    1.6  1  NAD_binding_8   NAD(P)-binding Rossmann-like domain
    0.00014   21.1   0.4      0.004   16.3   0.2    2.0  2  GIDA            Glucose inhibited division protein A
    0.00046   19.5   0.0      0.011   15.0   0.0    2.1  2  Thi4            Thi4 family
     0.0016   17.6   0.1     0.0024   17.0   0.1    1.3  1  FAD_binding_2   FAD binding domain
     0.0021   17.5   0.1     0.0031   16.9   0.1    1.2  1  FAD_oxidored    FAD dependent oxidoreductase
     0.0024   18.4   0.1     0.0093   16.5   0.1    2.0  2  Pyr_redox       Pyridine nucleotide-disulphide oxidoreductase
     0.0028   17.6   0.0     0.0054   16.7   0.0    1.4  1  NAD_Gly3P_dh_N  NAD-dependent glycerol-3-phosphate dehydrogen
     0.0045   16.9   0.0     0.0095   15.8   0.0    1.5  1  3HCDH_N         3-hydroxyacyl-CoA dehydrogenase, NAD binding 
     0.0057   15.9   0.1      0.014   14.7   0.1    1.6  2  Pyr_redox_2     Pyridine nucleotide-disulphide oxidoreductase
     0.0074   15.4   0.2      0.054   12.5   0.1    2.0  2  Lycopene_cycl   Lycopene cyclase protein
  ------ inclusion threshold ------
       0.01   15.5   0.1      0.023   14.3   0.1    1.6  1  ApbA            Ketopantoate reductase PanE/ApbA
      0.014   15.5   0.0      0.023   14.8   0.0    1.3  1  Shikimate_DH    Shikimate / quinate 5-dehydrogenase
       0.18   10.5   0.1       0.27    9.9   0.1    1.2  1  HI0933_like     HI0933-like protein


Domain annotation for each model (and alignments):
>> SE  Squalene epoxidase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  333.4   0.0  7.3e-103  8.2e-100       3     266 ..     191     458 ..     189     466 .. 0.96

  Alignments for each domain:
  == domain 1  score: 333.4 bits;  conditional E-value: 7.3e-103
          SE   3 kltvvcDGifsklRkelsdnkvevtssfvGlvlknaelpkknkghvilgkpspvllYqisstetRilveikskklP..siangelkeylkeevaPqlPk 99 
                  lt+++DG  sk+Rk+ +d+++ v+s+f  l l ++ +p++n+g vilg++spvllYqi+++etR l++++s+  P  s+a+g ++ +l+++v+P+lPk
  KHJ35519.1 191 DLTIIADGYASKFRKQYIDKSPIVKSKFYALELIDCPIPSPNHGIVILGDNSPVLLYQIGTHETRALIDVPSN-TPsaSVAAGGIRGHLRNKVLPSLPK 288
                 69*********************************************************************98.551256899**************** PP

          SE 100 elrksfkkaleegkl.rsmpnkflpasknekkGlillGDalnmRHPltggGmtvalnDivllskllkpl..edlsdeekvleelksfyvkRkeldavvn 195
                 ++++sf+ka+e+gk+ rsmpn++lp+s+++kkG+illGDa+nmRHPltggGmtva+nD+v ls+ll+p+  + ls++++v e++k+f++kRk+l++++n
  KHJ35519.1 289 QVQPSFEKAMEDGKIpRSMPNSWLPPSTQQKKGVILLGDAMNMRHPLTGGGMTVAFNDVVYLSDLLSPTriPFLSNTKAVQEAMKEFHWKRKSLSSIIN 387
                 *************9889***************************************************97789************************** PP

          SE 196 vLsialyslfaadsdelkalrkgCfdYlkrGgecvsgpvallsgllprPllLikhffavalysvylllker 266
                 +L++alyslfaa++++lk+l+kgCf Y+++Gg+c++gpv+ll+g+  +P++Li+hffava+ s+ ++++e 
  KHJ35519.1 388 ILAMALYSLFAANDKQLKTLQKGCFAYFQKGGNCIDGPVGLLAGIIRQPMVLIYHFFAVAILSIWITITES 458
                 ****************************************************************9988764 PP

>> FAD_binding_3  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.1   0.3   6.3e-11   7.1e-08       1     318 [.      19     354 ..      19     380 .. 0.68

  Alignments for each domain:
  == domain 1  score: 32.1 bits;  conditional E-value: 6.3e-11
                    EEEEEEE--SHHHHHHHHHHHHTTHHEEEEESSSSSCCSSS--EEEHHHHHHHHHTT-HHHHHH.HSEECCCCEEEEEEE.......CCCC....C CS
  FAD_binding_3   1 etdVlIVGaGpaGlmlallLseaGvrvvlvekrsttvvlpradglnqrtmellrqlGledrila.egapnelmgealyne.......lsdt....p 84 
                    e+dV++VGaG  G   a  L+++G +v l+e+  ++ +   ++ l++  +  l++lGl++ ++  ++ p ++ + + y++                
     KHJ35519.1  19 EADVVVVGAGIFGCAIAFALANQGRSVFLLERSLQQPDRIVGELLQPGGISALEKLGLAHCLEGiDAIPVHGYEVIYYGTgvkipypK--AdtdnA 112
                    579*********************************************************9986256677777778888844444442..033434 PP

                    EEEEEHHCHHCST-CEE--HHHHHHHHHHHHHHHT.EEETCS..EEEECCEECCC..CCCCEEEECCTTEEEEEEEEEEEE.....--GTT-HHHH CS
  FAD_binding_3  85 karadlelesspervtvypqteleriLvehaeerg.lqvrfk..tevesleqdee..gvtaevrdketgeeetvrakYlvG.....aDGgrStvrk 170
                     a+ + +++ + ++  ++   +l   L+   ++ + +++ +   te+ ++ q+++  gv++e  + +tg++   +a+Y  G     aDG+ S+ rk
     KHJ35519.1 113 SAHGYTNIKGGNPEGRAFHHGRLISQLRRCCSQNPnIKIVETlvTETITNPQTQTviGVRSETMNDKTGKR---EADYYLGdltiiADGYASKFRK 205
                    44444448888888889999999999999999999999977533776666666553377788888888888...777755544444*********9 PP

                    HHTGG.EEEEEEEEEEEEEEEEEEC-SCCCTTCCEEEEECCTTEE.EEEECCETEEEEEEEEECCE-GGGS....CCCHHHHHHHHHHHHHHTTSS CS
  FAD_binding_3 171 tlgie.fegeetvyeagvldvlfdadlsdiveplvlilsaesrgv.mviPlentlerfyvqvearaekeer....sekfteeevkarlreivgekt 260
                    +   +  + +++ y ++++d  + +    + +++v+++ +++  +   i + +  +r+++ v+ +++ ++          +++v   l+++v++++
     KHJ35519.1 206 QYIDKsPIVKSKFYALELIDCPIPS----PNHGIVILGDNSPVLLyQ-IGTHE--TRALIDVPSNTPSASVaaggIRGHLRNKVLPSLPKQVQPSF 294
                    9654436666666666666666555....444444444444443332.22222..34444444444333331111333344444444555555544 PP

                    CEEEEEEEEEEEE..EEEEESSSEETTEEE-GGGTEEE-STTSHHHHHHHHHHHHHHHHH CS
  FAD_binding_3 261 ldveieevsawtv..aqrvaekyrkgrvflaGDAaHihpPtgGqGlNtaiqDavnLawkL 318
                     ++  + +    +  +    ++ +k  v l GDA  +  P +G G+ +a +D+v+L   L
     KHJ35519.1 295 EKAMEDGKIPRSMpnSWLPPSTQQKKGVILLGDAMNMRHPLTGGGMTVAFNDVVYLSDLL 354
                    444333332222200222334456779****************************98666 PP

>> DAO  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   29.1   0.0   6.5e-10   7.3e-07       1      29 [.      21      51 ..      21      56 .. 0.95
   2 ?    4.0   0.0     0.028        31     130     227 ..     119     223 ..     104     256 .. 0.70

  Alignments for each domain:
  == domain 1  score: 29.1 bits;  conditional E-value: 6.5e-10
                EEEEECTSHHHHHHHHHHHHTT..EEEEESS CS
         DAO  1 dvviiGGGiiGlstAyeLarrg..Vtllekg 29
                dvv++G+Gi+G+++A++La +g  V lle++
  KHJ35519.1 21 DVVVVGAGIFGCAIAFALANQGrsVFLLERS 51
                9******************9999******97 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.028
                 TTSEEEEETTEEEEEHHHHHHHHHHHHHHTT.-EEEESECEEE.EEEEE.TCEEEEE....EECTEEEEEEEE.....EEE--GGGHHHHHTTCTT..T CS
         DAO 130 gllgalfypdtgqvdpakltaalaraaealG.veilegtevtg.leeed.gkvwgve....rttpgendaada.....vVnaaGawsdllgllkel..d 214
                 +++g  ++p++  ++  +l+  l+r + ++  ++i+e   vt+ + +++   v gv+    +++ g + +ad+      ++a G  s++    k+   +
  KHJ35519.1 119 NIKG--GNPEGRAFHHGRLISQLRRCCSQNPnIKIVET-LVTEtITNPQtQTVIGVRsetmNDKTGKR-EADYylgdlTIIADGYASKFR---KQYidK 210
                 5666..699*8889************988854899995.88886777555778888787764444543.457777888999999777643...222223 PP

                 SEEEEEEEEEEEE CS
         DAO 215 lpispvrgqvlvl 227
                  pi+  + + l l
  KHJ35519.1 211 SPIVKSKFYALEL 223
                 5777666666665 PP

>> NAD_binding_8  NAD(P)-binding Rossmann-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.7   0.2   1.6e-07   0.00018       1      27 [.      24      50 ..      24      53 .. 0.96

  Alignments for each domain:
  == domain 1  score: 21.7 bits;  conditional E-value: 1.6e-07
                   EE--SHHHHHHHHHHHCCTEEEEEE-S CS
  NAD_binding_8  1 IvGaGlsGlvaAylLakagfdvlllek 27
                   +vGaG++G+++A +La++g++v lle+
     KHJ35519.1 24 VVGAGIFGCAIAFALANQGRSVFLLER 50
                   8************************98 PP

>> GIDA  Glucose inhibited division protein A
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.3   0.2   3.5e-06     0.004       1      29 [.      21      52 ..      21      94 .. 0.83
   2 ?    3.1   0.0     0.036        41     100     141 ..     138     178 ..     107     210 .. 0.79

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 3.5e-06
                CEEEE-SSHHHHHHHHHHHHTT--EEEE...E CS
        GIDA  1 dviViGgGhAGceAAlaaarlGakvlLi...t 29
                dv+V+G+G  Gc+ A+a+a+ G +v L+    
  KHJ35519.1 21 DVVVVGAGIFGCAIAFALANQGRSVFLLersL 52
                79*************************95552 PP

  == domain 2  score: 3.1 bits;  conditional E-value: 0.036
                 HHHHHHHTSTTEEEEES-EEEEEECTTEEEEEEETTS-EEEE CS
        GIDA 100 evteklenepnleiieeeveeliveekkvkgvvtedgetika 141
                 ++++  +++pn++i+e  v+e i+ + +++ v+  + et+++
  KHJ35519.1 138 QLRRCCSQNPNIKIVETLVTETIT-NPQTQTVIGVRSETMND 178
                 67788899*************977.65555555555555444 PP

>> Thi4  Thi4 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.0   0.0   9.5e-06     0.011      16      51 ..      18      52 ..      12      58 .. 0.93
   2 ?    2.0   0.0     0.092     1e+02      99     135 ..     135     171 ..     128     180 .. 0.78

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 9.5e-06
                TEEEEEEE--SHHHHHHHHHHHHCTTS-EEEEESSS CS
        Thi4 16 aesDvvivGaGssGLtaayylakkpdlkvailersv 51
                 e+Dvv+vGaG  G + a+ la++ +  v +lers+
  KHJ35519.1 18 HEADVVVVGAGIFGCAIAFALANQ-GRSVFLLERSL 52
                589*********************.*********98 PP

  == domain 2  score: 2.0 bits;  conditional E-value: 0.092
                 HHHHHHHHHHTSTTEEEEESEEEEEEEEETBTEEEEE CS
        Thi4  99 ftstllskvlqlanvkllnavaveDlivregegvaGv 135
                 ++s+l     q +n+k++++++ e +   + ++v Gv
  KHJ35519.1 135 LISQLRRCCSQNPNIKIVETLVTETITNPQTQTVIGV 171
                 567777777899******9998887665556999998 PP

>> FAD_binding_2  FAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.0   0.1   2.2e-06    0.0024       1      30 [.      21      50 ..      21      55 .. 0.94

  Alignments for each domain:
  == domain 1  score: 17.0 bits;  conditional E-value: 2.2e-06
                   SEEEE--SHHHHHHHHHHHHTTT-EEEEES CS
  FAD_binding_2  1 DviViGsGlAGLaAAleaaeaGlkvavvek 30
                   Dv+V+G+G+ G+a A ++a++G++v ++e 
     KHJ35519.1 21 DVVVVGAGIFGCAIAFALANQGRSVFLLER 50
                   9**************************997 PP

>> FAD_oxidored  FAD dependent oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   0.1   2.8e-06    0.0031       1      31 [.      21      51 ..      21      53 .. 0.97

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 2.8e-06
  FAD_oxidored  1 DvvVvGGgpaGvaAAiaAaraGakvlLveer 31
                  DvvVvG+g+ G+a A a a++G++v L+e++
    KHJ35519.1 21 DVVVVGAGIFGCAIAFALANQGRSVFLLERS 51
                  9****************************86 PP

>> Pyr_redox  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.5   0.1   8.3e-06    0.0093       2      31 ..      22      51 ..      21      64 .. 0.93
   2 ?   -1.9   0.0       4.7   5.3e+03      30      55 ..     278     303 ..     277     304 .. 0.85

  Alignments for each domain:
  == domain 1  score: 16.5 bits;  conditional E-value: 8.3e-06
                EEEECSSHHHHHHHHHHHHTTSEEEEEESS CS
   Pyr_redox  2 vvvvGgGyiglElAgalaelgkkVtvvers 31
                vvvvG+G  g+  A ala+ g +V ++ers
  KHJ35519.1 22 VVVVGAGIFGCAIAFALANQGRSVFLLERS 51
                8***************************97 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 4.7
                 SSSSSSTTSSHHHHHHHHHHHHHTTE CS
   Pyr_redox  30 rsdkllrllDeeaskilqeklekngi 55 
                  ++k+l+ l+++++  +++ +e+ +i
  KHJ35519.1 278 LRNKVLPSLPKQVQPSFEKAMEDGKI 303
                 688999******99999999998665 PP

>> NAD_Gly3P_dh_N  NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.7   0.0   4.8e-06    0.0054       2      38 ..      22      58 ..      21      62 .. 0.89

  Alignments for each domain:
  == domain 1  score: 16.7 bits;  conditional E-value: 4.8e-06
                    EEEE--SHHHHHHHHHHHTTT--EEEE-S-HHHHHHH CS
  NAD_Gly3P_dh_N  2 iavlGaGswGtalAkvlaenghevrlwvreeelieei 38
                    + v+GaG +G a+A +la++g +v l  r+ ++ ++i
      KHJ35519.1 22 VVVVGAGIFGCAIAFALANQGRSVFLLERSLQQPDRI 58
                    89************************99987776655 PP

>> 3HCDH_N  3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.8   0.0   8.5e-06    0.0095       2      38 ..      22      58 ..      21      76 .. 0.88

  Alignments for each domain:
  == domain 1  score: 15.8 bits;  conditional E-value: 8.5e-06
                EEEE--SCCHHHHHHHHHHTT-EEEEE-S-HHHHHHH CS
     3HCDH_N  2 vaviGaGtmGagiaavfasagleVvlvdiseealeka 38
                v v+GaG+ G  ia ++a++g +V l+++s ++ ++ 
  KHJ35519.1 22 VVVVGAGIFGCAIAFALANQGRSVFLLERSLQQPDRI 58
                89**************************998876665 PP

>> Pyr_redox_2  Pyridine nucleotide-disulphide oxidoreductase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.7   0.1   1.2e-05     0.014     143     173 ..      20      50 ..       8      77 .. 0.75
   2 ?   -2.9   0.0       2.8   3.1e+03     197     236 ..     148     198 ..     131     203 .. 0.58

  Alignments for each domain:
  == domain 1  score: 14.7 bits;  conditional E-value: 1.2e-05
                  SEEEEES-SHHHHHHHHHHHHHT-EEEEEES CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Pyr_redox_2 143 krivvvGgGyiGvElAaalaklgkevtlvea 173
                  +++vvvG+G  G+ +A ala+ g  v l+e+
   KHJ35519.1  20 ADVVVVGAGIFGCAIAFALANQGRSVFLLER 50 
                  5667777777777777777777777777766 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 2.8
                  TEEEEESCEEEEEEETTE.......EEE.EEETTSCE....EEESEEEE-S- CS
                  xxxxxxxxxxxxxxxxxx.......xxx.xxxxxxxx....xxxxxxxxxxx RF
  Pyr_redox_2 197 Gvevklgtsvkeidgnge.......kle.vvledgee....idadlvvvavG 236
                  +++++ +t v+e + n++       + e + +++g++    +  dl ++a G
   KHJ35519.1 148 NIKIV-ETLVTETITNPQtqtvigvRSEtMNDKTGKReadyYLGDLTIIADG 198
                  56666.6666666666665655533222455555555555555666666655 PP

>> Lycopene_cycl  Lycopene cyclase protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   12.5   0.1   4.8e-05     0.054       1      33 [.      21      51 ..      21      60 .. 0.90
   2 ?    0.7   0.0      0.19   2.2e+02     239     276 ..     299     340 ..     246     399 .. 0.81

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 4.8e-05
  Lycopene_cycl  1 DvvviGaGpAglslAarlteakpglkvvlieas 33
                   Dvvv+GaG  g+++A  l  a++g +v l+e s
     KHJ35519.1 21 DVVVVGAGIFGCAIAFAL--ANQGRSVFLLERS 51
                   9*****************..999999*999876 PP

  == domain 2  score: 0.7 bits;  conditional E-value: 0.19
  Lycopene_cycl 239 EqgviP..vtlggslprleqk..vlaiGaaaglvhPaTGYsv 276
                    E+g iP  + +   +p ++qk  v+ +G a  + hP TG  +
     KHJ35519.1 299 EDGKIPrsMPNSWLPPSTQQKkgVILLGDAMNMRHPLTGGGM 340
                    56666633444455788888889999************9544 PP

>> ApbA  Ketopantoate reductase PanE/ApbA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.1   2.1e-05     0.023       1      31 [.      22      52 ..      22      61 .. 0.90

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 2.1e-05
                EEEES-SHHHHHHHHHHHHHTHCEEEE-SCH CS
        ApbA  1 iailGaGaiGsllaakLakagadvtlilrsr 31
                ++++GaG  G+ +a  La++g+ v l+ rs 
  KHJ35519.1 22 VVVVGAGIFGCAIAFALANQGRSVFLLERSL 52
                689************************9975 PP

>> Shikimate_DH  Shikimate / quinate 5-dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0     2e-05     0.023       9      75 ..      16      82 ..       8      88 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 2e-05
                  ..TT-EEEEES-SHHHHHHHHHHHCCT-CEEEEEESSHHHHHHHHHHH.T.ET-EEEEGCGHHHHHHT CS
  Shikimate_DH  9 slkekkvlliGaGemaelvakhLlakgvkkvvvaNRtlerakelaeel.kgeeiealkleelkellae 75
                   ++e+ v+++GaG  +  +a +L+++g   v+ + R+l++ ++++ el +   i+al+   l ++l+ 
    KHJ35519.1 16 ICHEADVVVVGAGIFGCAIAFALANQGRS-VFLLERSLQQPDRIVGELlQPGGISALEKLGLAHCLEG 82
                  567999******************99987.***********999999833333344333344555555 PP

>> HI0933_like  HI0933-like protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.9   0.1   0.00024      0.27       2      32 ..      21      51 ..      20      59 .. 0.92

  Alignments for each domain:
  == domain 1  score: 9.9 bits;  conditional E-value: 0.00024
                 SEEEE--SHHHHHHHHHHHHTT--EEEE-SS CS
  HI0933_like  2 dviviGgGaAGlmaAisaakrgkrVllleka 32
                 dv+v+G+G  G   A ++a++g++V lle+ 
   KHJ35519.1 21 DVVVVGAGIFGCAIAFALANQGRSVFLLERS 51
                 8***************************986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       568  (0.0316805); expected 358.6 (0.02)
Passed bias filter:                      486  (0.0271069); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        16  (0.000892409); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              16  [number of targets reported over threshold]
# CPU time: 0.59u 0.25s 00:00:00.84 Elapsed: 00:00:00.41
# Mc/sec: 3648.01
//
Query:       KHJ35520.1  [L=301]
Description: putative methylsterol monooxygenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      9e-26   90.8  23.2      9e-26   90.8  23.2    1.9  2  FA_hydroxylase  Fatty acid hydroxylase superfamily


Domain annotation for each model (and alignments):
>> FA_hydroxylase  Fatty acid hydroxylase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1     0.066   1.2e+03      44      84 ..      35      79 ..      26     115 .. 0.59
   2 !   90.8  23.2     5e-30     9e-26       2     133 .]     143     279 ..     142     279 .. 0.87

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.066
  FA_hydroxylase 44 alrahplealllallllllllllgplsalll....vlvlaallel 84
                    +l +++ e++  + l++ ++ ++ +  +++     +++++++ ++
      KHJ35520.1 35 RLWMSWYEYMQNDTLATGIMSFVMHELVYFGrsipWVIIGYIPYF 79
                    555666666666655554444444444433333345555554444 PP

  == domain 2  score: 90.8 bits;  conditional E-value: 5e-30
  FA_hydroxylase   2 llallledfveYwvHrllHrvkllwrrlHkvHHsseaptalaalrahpleallla.lllllll...lllg..plsalllvlvlaallelliHsgl 90 
                     +++++led+++Yw+Hrl+H+ + +++++Hk+HH+++ap  laa++a+p+e+++l+  ++l++    l+ g  +l++++ +++++ ++++  Hsg 
      KHJ35520.1 143 AFFFVLEDTWHYWMHRLFHWGP-FYKHIHKIHHHYSAPFGLAAEYASPIETMVLGaGTVLMPTvwcLITGnlHLVTMYCWIICRLFQAIDAHSG- 235
                     789****************865.9*****************************99766665543325555777777777***************. PP

  FA_hydroxylase  91 hvslgwllerl...latpraHrlHHskneegnfgvllslwDrlfgT 133
                      ++++w l+++    a++++H++HH+++  gn+++++++wD+l+ T
      KHJ35520.1 236 -YEFPWSLHHFlpfWAGAEHHDVHHERFI-GNYSSSFRWWDYLMDT 279
                     .999999955545569*************.*************998 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (301 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       567  (0.0316247); expected 358.6 (0.02)
Passed bias filter:                      317  (0.0176809); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.43u 0.24s 00:00:00.67 Elapsed: 00:00:00.39
# Mc/sec: 2316.27
//
Query:       KHJ35521.1  [L=865]
Description: putative suppressor of mek1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-79  265.4   2.5    2.7e-79  265.4   2.5    1.7  2  SMK-1     Component of IIS longevity pathway SMK-1


Domain annotation for each model (and alignments):
>> SMK-1  Component of IIS longevity pathway SMK-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  265.4   2.5   1.5e-83   2.7e-79       2     191 .]     181     369 ..     180     369 .. 0.99
   2 ?   -3.5   0.0      0.43   7.8e+03     135     157 ..     398     421 ..     396     431 .. 0.65

  Alignments for each domain:
  == domain 1  score: 265.4 bits;  conditional E-value: 1.5e-83
       SMK-1   2 edYikkLlelfeeaedleslenLhalcsivktilllndeelleellsdelilgvvGilEydpefpehkanhRefLkqkakfkevipikdeelkkkihqt 100
                 e+Yi+kL+ l+e+aedle+l +Lh+lc+i+kt++llnd+++le ++sd +++gvvG+lEydp+fp+hkanhR++L ++ ++kev+ i+d ++ +kih t
  KHJ35521.1 181 EEYIQKLVPLVEMAEDLEDLASLHRLCNIMKTMILLNDTTILELAVSDGVVMGVVGALEYDPDFPTHKANHRQWLAKEGRYKEVVHIDD-DVCRKIHST 278
                 89*************************************************************************************87.899****** PP

       SMK-1 101 yrlqylkDvvLarvlddstlsvLnsliffnqveIvsllqedeefLkelfkllkdeetekekrrelvlllkelcslaknlqlpareelfktL 191
                 yrlqylkDvvLar+ldd+t+svLnsliffnqv+Iv++lq+++ +Lk+lf++++ ++t++++++e+vl+++++c+++k+lq++ar++l+ +L
  KHJ35521.1 279 YRLQYLKDVVLARILDDPTFSVLNSLIFFNQVDIVQHLQSNPLLLKNLFSIFRAQQTNQKRKKEAVLFIQQCCAIGKTLQPNARQQLYDNL 369
                 ****************************************************************************************986 PP

  == domain 2  score: -3.5 bits;  conditional E-value: 0.43
       SMK-1 135 vsllqedeefL.kelfkllkdeet 157
                 vs++ +d++++ +++f+++++++t
  KHJ35521.1 398 VSMIDHDPQMIrQTIFRQMSEKQT 421
                 677777776652456777765544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (865 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       523  (0.0291706); expected 358.6 (0.02)
Passed bias filter:                      363  (0.0202465); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.67u 0.25s 00:00:00.92 Elapsed: 00:00:00.43
# Mc/sec: 5992.02
//
Query:       KHJ35522.1  [L=187]
Description: putative chromatin-remodeling complex subunit ies6 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.9e-17   61.4   0.2    9.2e-17   60.5   0.2    1.5  1  YL1_C     YL1 nuclear protein C-terminal domain


Domain annotation for each model (and alignments):
>> YL1_C  YL1 nuclear protein C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.5   0.2   5.1e-21   9.2e-17       1      29 []     137     165 ..     137     165 .. 0.98

  Alignments for each domain:
  == domain 1  score: 60.5 bits;  conditional E-value: 5.1e-21
       YL1_C   1 yCdITGlpAkYrDPkTgLpYanveaykvI 29 
                 yCdITGlpA+Y+DPkT+L+Y+n+e++ +I
  KHJ35522.1 137 YCDITGLPAPYKDPKTRLRYHNSEVFGII 165
                 9*************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       401  (0.022366); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        13  (0.000725082); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.37
# Mc/sec: 1509.94
//
Query:       KHJ35523.1  [L=746]
Description: putative actin-related arp5 class [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.7e-51  173.2   0.0    7.9e-31  107.1   0.0    2.2  2  Actin       Actin
  ------ inclusion threshold ------
      0.066   12.9   0.3       0.32   10.7   0.1    2.1  2  MiaE_2      tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like


Domain annotation for each model (and alignments):
>> Actin  Actin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.1   0.0   8.9e-35   7.9e-31       5     203 ..      50     251 ..      47     341 .. 0.75
   2 !   63.9   0.0   1.1e-21   9.9e-18     268     403 ..     611     738 ..     578     741 .. 0.92

  Alignments for each domain:
  == domain 1  score: 107.1 bits;  conditional E-value: 8.9e-35
       Actin   5 savVlDnGssttraGyagedaPkavipslvgkprgrkveakl.yvgdealt.krpelevrspv..edGvvedwdaveelwehvlkee.lkvd....pee 94 
                 s +V+DnGss +raG++ +++P+     ++ k+r+rk + ++ +vg++a++      +vr+     +G+v +wd++e ++++v+ +  +  d    + +
  KHJ35523.1  50 SIIVIDNGSSAVRAGWSFDKTPQINTAPILSKYRDRKLNRTYaFVGADAYAdTTARGHVRYAFeaGSGIVSNWDVMESVLDYVFIKMgI--DghsgRID 146
                 679*********************************99886526899966533555555555522789***************998543..3335589* PP

       Actin  95 hpllltepplnppkqrekalEivfEkfkvpalylaksavlsafasgkstglvvDsGasvtsvvpVldGyvLkkairrsdlgGkaLteqlkellssknve 193
                  p+++te++ n p  r+ ++Ei+fE ++ p+l  + +a +s   +  +tglvv s +s+t+v+pV++  ++  + +r++ gG +  e+l +ll+ k   
  KHJ35523.1 147 VPIVMTEAVANLPYSRKTMTEIIFEAYRAPSLAYGIDALFSYNFNNGKTGLVVSSSHSSTHVIPVFNSKAILSQATRLKWGGSQNAEYLLKLLRLK--- 242
                 ****************************************975555569********************************************995... PP

       Actin 194 vtprylikkk 203
                   p++  k  
  KHJ35523.1 243 -YPNFPGKIT 251
                 .333333322 PP

  == domain 2  score: 63.9 bits;  conditional E-value: 1.1e-21
       Actin 268 seiklgeeRfkvpEiLFdpsligsesaleeekskllgiselivaainacdvdl..rpeLlanivvtGGnsllpglteRlekelaqlaskgvkvkiiape 364
                 ++i l+ eR +vpE++F+ps++g ++a         g+ e++++ + +    l    ++l+ i +tGG+++l+++ eRl + l+  +++g+ +k ++++
  KHJ35523.1 611 NQIHLNVERIRVPEVIFQPSIAGLDQA---------GLVEVTTDILIHRLSGLgcLDTFLKDIFLTGGTVMLRNFDERLREGLRGSLPSGSLLKTRKAQ 700
                 48999**********************.........*******9987766555449******************************************9 PP

       Actin 365 eerkysaWiGGSiLAslgtfqqlwvskqEYeEqGssvve 403
                  +++  aW G++ +A   + +  ++ ++EY E+Gs++ +
  KHJ35523.1 701 -DPILDAWKGAARWAGGTEWKLAAIKREEYLEKGSDYLK 738
                 .**********************************9875 PP

>> MiaE_2  tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.1   3.6e-05      0.32     105     139 ..     340     375 ..     330     389 .. 0.81
   2 ?   -1.6   0.0       0.2   1.8e+03      68      98 ..     566     596 ..     531     598 .. 0.69

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 3.6e-05
                 HHHHHHCCCS-HHHHHHHHHHS--HH.HHHHHHHHH CS
      MiaE_2 105 dfyrevaeyldadtrelvlavlddtg.haevaeekv 139
                 d+yr v e+ld +t++ ++ +ld+++ + e a ek+
  KHJ35523.1 340 DYYRSVQERLDGETKKEIKRILDSEDlKNEAALEKL 375
                 9**********************9872445555665 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.2
                 HHHGGGHHHHHHHHHTT--SSHHHHHHHHHH CS
      MiaE_2  68 eamePfvaavddfhkrtaPadwleslvkayv 98 
                   ++ +   + + h+  a +dw +sl+ a++
  KHJ35523.1 566 ADLLEWDPDFTEQHTLEAQKDWTKSLIHAFL 596
                 55555556666777788899*******9985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (746 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1320  (0.0736237); expected 358.6 (0.02)
Passed bias filter:                      440  (0.0245412); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         7  (0.000390429); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.69u 0.28s 00:00:00.97 Elapsed: 00:00:00.43
# Mc/sec: 5158.25
//
Query:       KHJ35524.1  [L=413]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       692  (0.0385967); expected 358.6 (0.02)
Passed bias filter:                      374  (0.0208601); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.48u 0.24s 00:00:00.72 Elapsed: 00:00:00.40
# Mc/sec: 3088.65
//
Query:       KHJ35525.1  [L=403]
Description: hypothetical protein EV44_g6519 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.2e-40  137.2   0.0    5.7e-40  136.8   0.0    1.2  1  cobW             CobW/HypB/UreG, nucleotide-binding domain
    5.2e-05   23.2   0.0    9.5e-05   22.3   0.0    1.4  1  MobB             Molybdopterin guanine dinucleotide synthesis
     0.0061   15.8   0.0       0.01   15.1   0.0    1.3  1  DUF2075          Uncharacterized conserved protein (DUF2075)
  ------ inclusion threshold ------
      0.014   15.7   0.1      0.056   13.7   0.0    1.9  2  AAA_22           AAA domain
      0.025   13.9   0.0      0.039   13.3   0.0    1.2  1  DnaB_C           DnaB-like helicase C terminal domain
      0.038   13.7   0.0      0.084   12.6   0.0    1.6  1  Viral_helicase1  Viral (Superfamily 1) RNA helicase
      0.042   13.6   0.4        0.4   10.5   0.2    2.3  2  AAA_29           P-loop containing region of AAA domain
      0.044   13.7   0.1       0.12   12.3   0.1    1.7  1  NTPase_1         NTPase
      0.054   12.4   0.0      0.089   11.7   0.0    1.3  1  TrwB_AAD_bind    Type IV secretion-system coupling protein DN
      0.056   13.5   0.0       0.14   12.2   0.0    1.6  1  AAA_14           AAA domain
      0.057   13.0   0.0      0.089   12.4   0.0    1.2  1  SRP54            SRP54-type protein, GTPase domain
       0.06   13.9   0.4       0.19   12.3   0.4    1.9  1  AAA_18           AAA domain
       0.07   13.5   0.0       0.11   12.9   0.0    1.4  1  AAA_16           AAA ATPase domain
       0.15   11.9   0.0       0.47   10.3   0.0    1.8  2  ATPase_2         ATPase domain predominantly from Archaea
       0.16   12.0   0.1       0.34   11.0   0.1    1.5  1  CbiA             CobQ/CobB/MinD/ParA nucleotide binding domai


Domain annotation for each model (and alignments):
>> cobW  CobW/HypB/UreG, nucleotide-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.8   0.0   4.7e-43   5.7e-40       1     172 [.       6     184 ..       6     189 .. 0.92

  Alignments for each domain:
  == domain 1  score: 136.8 bits;  conditional E-value: 4.7e-43
                 EEEEEEESTTCCHHHHHHHHH....CT--SS-EEEEESS-SSCHCCCCCCHCCCT...EEEETTTTECCHCTT-HHHHHHHHHHHHTT-SEEEEEECTT CS
        cobW   1 pvtvltGflGsGKTtLlnhll....enraglklavivNefgevsiDaellretgve..ivelenGciCctlredllkelealeereerldviliEttGl 93 
                 p+t++tGflGsGKTtLl +ll    +++a++k+a++ Nefg+++iD++l + +++   + e+ nGciCc+l   ++ +le+l e+   +++i+iEt+G 
  KHJ35525.1   6 PITIITGFLGSGKTTLLLNLLpqlrTKNANYKVALLKNEFGDLAIDSQLATYSSSIsgVREILNGCICCNLVGSISTALEELSENV-CPNRIIIETSGS 103
                 789*********************9999*********************977743345****************************.8*********** PP

                 TTHHHHHTT....SHHHHHCCCECEEEEEEETTTH.CCHCCHHHHHHHHHHTSSEEEEE-HHHHCHC..HHHHHHHHHHHHTT CS
        cobW  94 aePapvaft....eeelksdltldavvavvDaknleaeeekieekaedqlaaadllvlnKtDlldeeallekleerlrqlnpe 172
                 a Pa++a++    ++e+  ++ ld+v++v+D++n+ +  e+++ +a+ q  ++dl+v+nK++ +de++  +++ +rl +++ e
  KHJ35525.1 104 AFPATLAMEvnrlARETDGKYVLDGVITVIDVENW-KGYEDTSFTARLQARYTDLIVFNKWEDVDERRW-DECLDRLGDMEIE 184
                 ******6666789999999****************.89****************************955.8998888887765 PP

>> MobB  Molybdopterin guanine dinucleotide synthesis protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.3   0.0   7.9e-08   9.5e-05       3      45 ..       9      53 ..       7      68 .. 0.84

  Alignments for each domain:
  == domain 1  score: 22.3 bits;  conditional E-value: 7.9e-08
        MobB  3 givgksgsGKTtLleklipelk..arglrvgtiKhahhgfdvdkp 45
                 i+g+ gsGKTtLl +l+p+l+  + +++v+++K +  ++ +d++
  KHJ35525.1  9 IITGFLGSGKTTLLLNLLPQLRtkNANYKVALLKNEFGDLAIDSQ 53
                58899***************97225679*******9999999875 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.1   0.0   8.8e-06      0.01       3      52 ..       7      55 ..       6      67 .. 0.87

  Alignments for each domain:
  == domain 1  score: 15.1 bits;  conditional E-value: 8.8e-06
     DUF2075  3 vvlVtGvaGtGKtvvllnllaeleddeeertavylsvNhplvlvlreala 52
                + ++tG  G+GKt +llnll +l ++++ +++v l++N+   l++ ++la
  KHJ35525.1  7 ITIITGFLGSGKTTLLLNLLPQL-RTKNANYKVALLKNEFGDLAIDSQLA 55
                579********************.9999999*******977777777766 PP

>> AAA_22  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   4.7e-05     0.056       7      30 ..       7      30 ..       4      69 .. 0.83
   2 ?   -1.3   0.0         2   2.4e+03      41      91 ..     233     283 ..     218     294 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 4.7e-05
      AAA_22  7 ilvvtGesGtGKTtllrrlleqld 30
                i+++tG  G+GKTtll +ll ql 
  KHJ35525.1  7 ITIITGFLGSGKTTLLLNLLPQLR 30
                799****************99984 PP

  == domain 2  score: -1.3 bits;  conditional E-value: 2
      AAA_22  41 evvfvtlpsstsskdllrellralglelkaerlsseellealeqalrarav 91 
                 ++ +v++ s t s d+++e  + +++ +++++ + +  ++al + l+++ +
  KHJ35525.1 233 HQNEVEVLSVTLSLDFYTESNSRFTSTTNSQTPNPKIDIDALLNFLKTAPK 283
                 444566666666677777777777777777777777777777777766655 PP

>> DnaB_C  DnaB-like helicase C terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   0.0   3.3e-05     0.039      22     133 ..       8     125 ..       4     142 .. 0.86

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.3e-05
                 EEEEEXTTSSHHHHHHHHHHHHH.HCSTSEEEEEESSSXHHHHHHHHHHHHHTXX.HHHHHHTTSXHHHHHHHHHHHHHHHH....SEEEEEEXSSXCH CS
                 xxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxx RF
      DnaB_C  22 iiiAarpsmGktalalniaenaa.vkeklpvavfslemsaeqlvqRllsseaeid.skklrtgklkeedweklteaieelse....aklfiddtpaltv 114
                 +ii +  + Gkt+l ln+  +   ++++ +va+   e  +  + ++l +  ++i+  +++ +g +  + + ++++a+eelse     +++i+ + +  +
  KHJ35525.1   8 TIITGFLGSGKTTLLLNLLPQLRtKNANYKVALLKNEFGDLAIDSQLATYSSSISgVREILNGCICCNLVGSISTALEELSEnvcpNRIIIETSGSAFP 106
                 7999999************88662667789************************9678999**99988999999999999985544679********** PP

                 HHHHHHHHHHHHHTTEEEE CS
                 xxxxxxxxxxxxxxxxxxx RF
      DnaB_C 115 seirskarrlkkekglgli 133
                 +++ +++ rl++e++ + +
  KHJ35525.1 107 ATLAMEVNRLARETDGKYV 125
                 **********999655444 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.0     7e-05     0.084       1      27 [.       8      32 ..       8      73 .. 0.75

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 7e-05
  Viral_helicase1  1 ivvhGvpGcGKStlirkllrtsliltv 27
                     +++ G+ G+GK+tl+ +ll +    t+
       KHJ35525.1  8 TIITGFLGSGKTTLLLNLLPQ--LRTK 32
                     589****************87..3222 PP

>> AAA_29  P-loop containing region of AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   0.2   0.00033       0.4      24      39 ..       7      22 ..       1      34 [. 0.88
   2 ?    0.5   0.0      0.43   5.1e+02       4      20 ..     133     149 ..     130     158 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 0.00033
      AAA_29 24 atlltGpsGsGKSTll 39
                +t++tG  GsGK+Tll
  KHJ35525.1  7 ITIITGFLGSGKTTLL 22
                699************8 PP

  == domain 2  score: 0.5 bits;  conditional E-value: 0.43
      AAA_29   4 lqlvNWgtfdghtieid 20 
                 +++ NW  +++++++ +
  KHJ35525.1 133 IDVENWKGYEDTSFTAR 149
                 7899*****99887765 PP

>> NTPase_1  NTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.1   9.8e-05      0.12       3      30 ..       9      36 ..       7      39 .. 0.89

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 9.8e-05
                EEE--TTSSHHHHHHHHHHHH...GGGE CS
    NTPase_1  3 fiTGppGvGKtTlvkkvlellkssgvkv 30
                +iTG  G+GKtTl+ ++l +l+ ++ ++
  KHJ35525.1  9 IITGFLGSGKTTLLLNLLPQLRTKNANY 36
                79*******************9998664 PP

>> TrwB_AAD_bind  Type IV secretion-system coupling protein DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.7   0.0   7.5e-05     0.089      18      44 ..       8      34 ..       5      47 .. 0.89

  Alignments for each domain:
  == domain 1  score: 11.7 bits;  conditional E-value: 7.5e-05
  TrwB_AAD_bind 18 ilivGttGsGKtqalekllrairargd 44
                   ++i+G  GsGKt+ l +ll ++r ++ 
     KHJ35525.1  8 TIITGFLGSGKTTLLLNLLPQLRTKNA 34
                   689********************9985 PP

>> AAA_14  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.2   0.0   0.00011      0.14       4      40 ..       7      42 ..       5      68 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.2 bits;  conditional E-value: 0.00011
      AAA_14  4 ilvitGaRrvGKTtllkqlikellvkkesilyinldd 40
                i +itG   +GKTtll +l+ +l  +k+    ++l +
  KHJ35525.1  7 ITIITGFLGSGKTTLLLNLLPQLR-TKNANYKVALLK 42
                89*****************98888.444444444444 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.0   7.4e-05     0.089       4     108 ..       8     116 ..       6     149 .. 0.71

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 7.4e-05
                 EEEEESTTSSHHHHHHHHHHHHHHT..TS-EEEEEESTSSTTHHHHHHHHHHHT.TEEEEE.SSTTSCHHHHHHHHHHHHHHTTS.SEEEEEE--SSTT CS
       SRP54   4 illvGlqGaGKTttlaKLaallkke..gkkvllvaaDtfRaaAveQLktlaekl.gvpvik.kkeeadpaavakeavekakeeki.dvvlvDTaGrlqn 97 
                 +++ G+ G+GKTt l  L  +l+++  ++kv+l        a   QL+t+ +++ gv+ i       + +  ++ a+e+  e+ + + +++ T+G    
  KHJ35525.1   8 TIITGFLGSGKTTLLLNLLPQLRTKnaNYKVALLKNEFGDLAIDSQLATYSSSIsGVREILnGCICCNLVGSISTALEELSENVCpNRIIIETSGSAFP 106
                 6899*************9998888767999999988888888888999999886145433313333477778888888888877547889999986554 PP

                 HHHHHHHHHHH CS
       SRP54  98 dkelmeelkki 108
                    l  e++++
  KHJ35525.1 107 A-TLAMEVNRL 116
                 3.344444444 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.3   0.4   0.00016      0.19       2      44 ..       9      61 ..       9     158 .. 0.66

  Alignments for each domain:
  == domain 1  score: 12.3 bits;  conditional E-value: 0.00016
      AAA_18  2 lltGtpGvGKttlakeL....skrl.gf.....gvnlrdvakenglllevdpe 44
                ++tG  G+GKttl  +L    + ++ ++       + +d+a +++l ++    
  KHJ35525.1  9 IITGFLGSGKTTLLLNLlpqlRTKNaNYkvallKNEFGDLAIDSQLATYSSSI 61
                79**************9777644443558888888888888888887776666 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.9   0.0   9.2e-05      0.11      25      63 ..       6      48 ..       1     134 [. 0.76

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 9.2e-05
      AAA_16 25 elvllsGesGvGKsslvrellralekd....ggiflrgkcdql 63
                ++++++G  G+GK++l+  ll +l+++    ++ +l+ ++ +l
  KHJ35525.1  6 PITIITGFLGSGKTTLLLNLLPQLRTKnanyKVALLKNEFGDL 48
                899**************88888898886664455566666666 PP

>> ATPase_2  ATPase domain predominantly from Archaea
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00039      0.47      21      49 ..       6      34 ..       2      49 .. 0.83
   2 ?   -3.2   0.0       5.2   6.3e+03     106     113 ..     271     278 ..     222     298 .. 0.58

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00039
    ATPase_2 21 eiyfiYGpegsGKtaLlkeiienledkdk 49
                +i  i+G  gsGKt+Ll +++ +l+ k+ 
  KHJ35525.1  6 PITIITGFLGSGKTTLLLNLLPQLRTKNA 34
                5889****************999977654 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 5.2
    ATPase_2 106 iellleki 113
                 i++ll+ +
  KHJ35525.1 271 IDALLNFL 278
                 22222222 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.1   0.00029      0.34       4      35 ..      10      43 ..       7     137 .. 0.74

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00029
                EESSTTSSHHHHHHHHHHHHHH..TT--EEEEEE CS
                xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxx RF
        CbiA  4 astkGGvGKTtlaanLaralar..rglrVllvDa 35
                + +  G+GKTtl++nL+  l    ++++V+l++ 
  KHJ35525.1 10 ITGFLGSGKTTLLLNLLPQLRTknANYKVALLKN 43
                555559***********99988446999*99985 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (403 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       635  (0.0354175); expected 358.6 (0.02)
Passed bias filter:                      512  (0.0285571); expected 358.6 (0.02)
Passed Vit filter:                        79  (0.00440627); expected 17.9 (0.001)
Passed Fwd filter:                        15  (0.000836633); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              15  [number of targets reported over threshold]
# CPU time: 0.54u 0.28s 00:00:00.82 Elapsed: 00:00:00.42
# Mc/sec: 2853.66
//
Query:       KHJ35526.1  [L=457]
Description: putative sam binding domain-containing protein containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    3.1e-13   50.2   0.0      6e-13   49.3   0.0    1.5  1  Methyltransf_25  Methyltransferase domain
    2.1e-09   37.9   0.0    4.1e-09   37.0   0.0    1.5  1  Methyltransf_11  Methyltransferase domain
    8.5e-08   32.2   0.0    2.3e-07   30.8   0.0    1.7  2  Methyltransf_23  Methyltransferase domain
    6.1e-06   26.1   0.0    1.1e-05   25.3   0.0    1.4  1  Methyltransf_31  Methyltransferase domain
    6.2e-06   26.9   0.0    1.4e-05   25.8   0.0    1.6  1  Methyltransf_12  Methyltransferase domain
    9.6e-05   21.8   0.0    0.00017   21.0   0.0    1.3  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family
  ------ inclusion threshold ------
      0.023   14.6   0.0      0.038   13.8   0.0    1.2  1  Methyltransf_8   Hypothetical methyltransferase
        0.1   12.6   0.0       0.42   10.6   0.0    2.0  2  Methyltransf_32  Methyltransferase domain
       0.24   11.4   2.5        0.7   10.0   0.0    2.5  3  Nuc_recep-AF1    Nuclear/hormone receptor activator site AF-1


Domain annotation for each model (and alignments):
>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.3   0.0     3e-16     6e-13       1      97 []     144     246 ..     144     246 .. 0.83

  Alignments for each domain:
  == domain 1  score: 49.3 bits;  conditional E-value: 3e-16
                      EEEET-TTSHHHHHHHCTS...T..SSEEEEEESSHHHHHHHHHHHHHTTTTEEEEESBCCG..BSSSTTTEEEEEEEST.GGGSSHHHH.HHH CS
  Methyltransf_25   1 vLdlGcGtGrltlalakrl...g..kakvtgvDiseemleaareraeeeglnvefvqgdaed..lpfedgsfDlvvssga.lhhlsdedl.eka 85 
                      vL+++cGtG +++++++++   g  + ++tg+Di++ ++    e +e+++++++fvq+d+++  lpf+d++f +v++    +  +s  d+ +k+
       KHJ35526.1 144 VLEVACGTGYWSEMCHRHFsqqGikSVSFTGIDIAPPAIPL--ETLENSSIDWHFVQHDLRQvpLPFKDEEFCIVMVKDLsMV-TSMTDMeQKL 234
                      9*****************987636699***********976..44555679*********996667***********766444.444444278* PP

                      HHHHHHHEEEEE CS
  Methyltransf_25  86 lkeiarvLkpgG 97 
                      ++e+ r+Lk gG
       KHJ35526.1 235 MDEFLRILKSGG 246
                      ***********9 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.0   0.0     2e-12   4.1e-09       1      95 [.     145     249 ..     145     250 .. 0.84

  Alignments for each domain:
  == domain 1  score: 37.0 bits;  conditional E-value: 2e-12
                      EEET-TTSHHHHHHH....HTT...SEEEEEES-HHHHHHHHHHCCHHT-EEEETTEECCC..TSS-TT-EEEEEEES..-CCC-...CCHHHH CS
  Methyltransf_11   1 LdvGcGtGrlaeala....krg...arvvgvDlskemlklakekaseeglkvefvvadaek..lpfednsfDlvvsse..vlhhv...edpeka 80 
                      L+v+cGtG+ +e ++    ++g    + +g+D+++ ++ l   ++s  +    fv+ d+++  lpf+d+ f +v+++   +       +  +k+
       KHJ35526.1 145 LEVACGTGYWSEMCHrhfsQQGiksVSFTGIDIAPPAIPLETLENSSID--WHFVQHDLRQvpLPFKDEEFCIVMVKDlsM--VTsmtDMEQKL 234
                      89*************555555599999***********77776666666..679******97779**********999553..3344688999* PP

                      HHHHHHHEEEEEEEE CS
  Methyltransf_11  81 lkeiaRvLkpgGllv 95 
                      ++e+ R+Lk gG+l 
       KHJ35526.1 235 MDEFLRILKSGGTLE 249
                      ************985 PP

>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.8   0.0   1.2e-10   2.3e-07      22     132 ..     140     263 ..     127     286 .. 0.71
   2 ?   -3.3   0.0       3.6   7.2e+03      76      96 ..     376     407 ..     341     412 .. 0.54

  Alignments for each domain:
  == domain 1  score: 30.8 bits;  conditional E-value: 1.2e-10
  Methyltransf_23  22 aggrvLdiGcGtGillevl....rengf...svtgvDlspeaveiae...kakkaqkdqfdeqeaae.....pqgkfdlIv...lrevlehvpd 97 
                      +++rvL+++cGtG+++e +    +++g    s+tg+D+ p a+++     + + ++++q+d     +     +++ f ++    l++v+   + 
       KHJ35526.1 140 PPKRVLEVACGTGYWSEMChrhfSQQGIksvSFTGIDIAPPAIPLETlenSSIDWHFVQHDLR---QvplpfKDEEFCIVMvkdLSMVTSMTDM 230
                      789************99885444666656679************9878886666666666433...1222325555554432225666666666 PP

  Methyltransf_23  98 ppellrqiatllkpgGylllseplaslkedrllld 132
                        +l++ + ++lk gG l++ + +  ++ ++ll +
       KHJ35526.1 231 EQKLMDEFLRILKSGGTLEIWDGD--HSLRMLLPH 263
                      77****************997764..334444444 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 3.6
  Methyltransf_23  76 aaepqg...........kfdlIvlrevlehvp 96 
                       ++p++           ++ l++ ++++e+++
       KHJ35526.1 376 VKVPEKnfsnatqmairRTALMTVIQMIESLE 407
                      33333333333444444666666666666665 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   0.0   5.5e-09   1.1e-05       5     124 ..     142     277 ..     139     315 .. 0.74

  Alignments for each domain:
  == domain 1  score: 25.3 bits;  conditional E-value: 5.5e-09
  Methyltransf_31   5 lrvlDlGCGtGeltfelae....elgpkaevvGiDiseeaielArenaqklgldnveFeqgdieelekl.ledekfDlilsnevl..naladpd 91 
                      +rvl+++CGtG+ +   ++    + ++   ++GiDi + ai l +   + + +   +F q d  + + l ++de f +++ +++     ++d++
       KHJ35526.1 142 KRVLEVACGTGYWSEMCHRhfsqQGIKSVSFTGIDIAPPAIPLETL--E-NSSIDWHFVQHDLRQVP-LpFKDEEFCIVMVKDLSmvTSMTDME 231
                      68*********9887777654444444556***********99777..3.45556**********88.66********9999777677777765 PP

  Methyltransf_31  92 .kileeiervlkpggilliedpr............llaelpakvee 124
                       k + e  r lk+gg l i d +            + +e++++++e
       KHJ35526.1 232 qKLMDEFLRILKSGGTLEIWDGDhslrmllphsqvVNEEQDKNLQE 277
                      15566*************9999964444444444333333333333 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   6.9e-09   1.4e-05       1      99 []     145     248 ..     145     248 .. 0.82

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 6.9e-09
  Methyltransf_12   1 LeiGcGtGsllrallekl.....pdieytgvDispsaiedakeklakrennnnnnvelealdlldldggssfDlvvasnvlhhl..kdir.evl 86 
                      Le+ cGtG  ++++ +++     + +++tg+Di p ai+    + ++++  ++ + +l++  l  +d+   f +v + ++  ++   d++ +++
       KHJ35526.1 145 LEVACGTGYWSEMCHRHFsqqgiKSVSFTGIDIAPPAIPLETLENSSIDW-HFVQHDLRQVPLPFKDE--EFCIVMVKDLSMVTsmTDMEqKLM 235
                      8*************************************888888777775.55666666666666665..8877776666655588677669** PP

  Methyltransf_12  87 dnirklLkpgGrl 99 
                      d++ + Lk gG l
       KHJ35526.1 236 DEFLRILKSGGTL 248
                      ***********86 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.0   0.0   8.3e-08   0.00017      44     152 ..     137     251 ..     131     264 .. 0.78

  Alignments for each domain:
  == domain 1  score: 21.0 bits;  conditional E-value: 8.3e-08
                      -S--TTEEEEES-TT-HHHHHHHHHHHHHH....EEEEEES-HHHHHHHHHHHHHHTSSTEEEEE--TTT..-TTS-T-EEEEEEE..S-GGG- CS
  Ubie_methyltran  44 avkrgakvlDvagGtgDlafklsdsvgekg....kvvvlDinenmLkvgekklkeegkinieflqanaee..LpfeddsfDvvtvs..fGlrnv 129
                       + ++++vl+va+Gtg ++    ++  ++g      +++Di +  +        e++ i+ +f+q +  +  Lpf+d+ f +v v     +  +
       KHJ35526.1 137 QKMPPKRVLEVACGTGYWSEMCHRHFSQQGiksvSFTGIDIAPPAIPLE--T-LENSSIDWHFVQHDLRQvpLPFKDEEFCIVMVKdlSMVTSM 227
                      5667899**************9999999998877788899998876653..3.456677889999876543399********999632357789 PP

                      S-HH.HHHHHHHHHEEEEEEEEEE CS
  Ubie_methyltran 130 tDkl.kaLkeayrvlkpGGrlvvl 152
                      tD++ k + e  r+lk GG+l + 
       KHJ35526.1 228 TDMEqKLMDEFLRILKSGGTLEIW 251
                      998615567889*******99875 PP

>> Methyltransf_8  Hypothetical methyltransferase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.8   0.0   1.9e-05     0.038      99     156 ..     187     250 ..     181     265 .. 0.76

  Alignments for each domain:
  == domain 1  score: 13.8 bits;  conditional E-value: 1.9e-05
                     EESS-SSTTEEES-TTS-S-..-TT-EEEE.EEES---S..S-H.HHHHHHHHHHEEEEEEEEE CS
  Methyltransf_8  99 fdlvavnervvacdlakvPl..edesvdva.vfclslmg..tnl.adflkeanrvlkvGGllkv 156
                     ++  +++ + v  dl++vPl  +de   ++ v  ls+++  t++ ++ + e  r+lk GG l +
      KHJ35526.1 187 LENSSIDWHFVQHDLRQVPLpfKDEEFCIVmVKDLSMVTsmTDMeQKLMDEFLRILKSGGTLEI 250
                     5567788899999***9986446776665516679985422454256789***********988 PP

>> Methyltransf_32  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.6   0.0   0.00021      0.42      17      61 ..     132     179 ..     122     199 .. 0.85
   2 ?   -2.3   0.1         2     4e+03      56      84 ..     348     375 ..     329     400 .. 0.48

  Alignments for each domain:
  == domain 1  score: 10.6 bits;  conditional E-value: 0.00021
  Methyltransf_32  17 lkelakesgaltvvDvGaGkgYLsfvlal..keke.yklkvvgidake 61 
                      +  ++++ ++++v++v++G gY s + +   +++  ++++++gid+  
       KHJ35526.1 132 CSPVSQKMPPKRVLEVACGTGYWSEMCHRhfSQQGiKSVSFTGIDIAP 179
                      5556678899******************9887777799*******875 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 2
  Methyltransf_32  56 gidakeelvekaekraeklgkkfnkrlsf 84 
                      +i + + + e+    ++k  ++f ++ s+
       KHJ35526.1 348 AIPLDKVRWENEHSTKKKATSDF-TSESK 375
                      44444444444444444444444.22222 PP

>> Nuc_recep-AF1  Nuclear/hormone receptor activator site AF-1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.1   0.3      0.39   7.8e+02      37      67 ..      46      75 ..       9      89 .. 0.71
   2 ?   -2.9   0.0       3.6   7.1e+03      39      59 ..     131     151 ..     127     174 .. 0.75
   3 ?   10.0   0.0   0.00035       0.7      29      85 ..     286     344 ..     261     347 .. 0.80

  Alignments for each domain:
  == domain 1  score: 0.1 bits;  conditional E-value: 0.39
  Nuc_recep-AF1 37 stlsspinglgspysVIssslgspslslpst 67
                   s+ ++  +gl+ + s+ sss+++ s  +ps 
     KHJ35526.1 46 SSRGTTASGLQRSMSIRSSSISKFSG-TPSN 75
                   44567778888888888888888776.4444 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 3.6
  Nuc_recep-AF1  39 lsspinglgspysVIssslgs 59 
                    l+sp++   +p +V+  + g+
     KHJ35526.1 131 LCSPVSQKMPPKRVLEVACGT 151
                    788888888888887766665 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 0.00035
  Nuc_recep-AF1  29 srsLpspistlsspinglgspysV.Issslgspslsl.pstpglnfgtlespqlnslns 85 
                       L +p ++ ++p n   s y+  Is +lgs  l+  p t+ l+f  +es  l+ +ns
     KHJ35526.1 286 GIYLVTPDTSFAAPKNPYLSEYNLwISKALGSRNLTSmPCTTILSFLIQESESLQDINS 344
                    55688999999***********9769******887644*************99988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (457 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       592  (0.0330191); expected 358.6 (0.02)
Passed bias filter:                      423  (0.0235931); expected 358.6 (0.02)
Passed Vit filter:                        37  (0.0020637); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.52u 0.23s 00:00:00.75 Elapsed: 00:00:00.39
# Mc/sec: 3474.07
//
Query:       KHJ35527.1  [L=92]
Description: hypothetical protein EV44_g3844 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (92 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       581  (0.0324056); expected 358.6 (0.02)
Passed bias filter:                      411  (0.0229238); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.37u 0.26s 00:00:00.63 Elapsed: 00:00:00.40
# Mc/sec: 685.59
//
Query:       KHJ35528.1  [L=791]
Description: putative rrm domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.5e-07   31.7   0.0    4.1e-07   30.2   0.0    1.7  1  PWI              PWI domain
    0.00014   21.6   0.3     0.0004   20.1   0.2    1.9  2  RRM_1            RNA recognition motif. (a.k.a. RRM, RBD, or 
    0.00025   21.0   0.1     0.0014   18.6   0.0    2.1  2  Nup35_RRM_2      Nup53/35/40-type RNA recognition motif
    0.00086   19.2   2.1     0.0015   18.4   2.1    1.4  1  zf-CCCH          Zinc finger C-x8-C-x5-C-x3-H type (and simil
  ------ inclusion threshold ------
      0.018   13.9   0.1      0.018   13.9   0.1    2.0  2  Mgr1             Mgr1-like, i-AAA protease complex subunit
       0.44    9.6   9.4       0.75    8.8   9.4    1.2  1  Atg14            Vacuolar sorting 38 and autophagy-related su
        1.1    7.7   2.0        1.5    7.2   2.0    1.1  1  FHIPEP           FHIPEP family


Domain annotation for each model (and alignments):
>> PWI  PWI domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.2   0.0   1.6e-10   4.1e-07       3      64 ..      11      74 ..       9      79 .. 0.83

  Alignments for each domain:
  == domain 1  score: 30.2 bits;  conditional E-value: 1.6e-10
         PWI  3 lkpWIakkitellgfeDdvvieyvlnlLeee..keldpkklqinltgfLekeaekFvkeLWell 64
                lk+WI k++++  +++ dv+++yvl+lL ++  +e      + ++ +fL++++  Fv++ ++ +
  KHJ35528.1 11 LKKWIVKRLENTSDADADVLADYVLALLRHDgdDETVRALCESEIPDFLKEDSVLFVRDVFDAI 74
                8***************************5533234444455569****************9987 PP

>> RRM_1  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.1   0.2   1.6e-07    0.0004       1      65 [.     361     420 ..     361     425 .. 0.86
   2 ?   -2.8   0.0       2.3     6e+03      22      54 ..     677     702 ..     674     704 .. 0.64

  Alignments for each domain:
  == domain 1  score: 20.1 bits;  conditional E-value: 1.6e-07
                 EEEESE.TTTSSHHHHHHHHHTTSCEEEEEEEEETTTSEEEEEEEEESSHHHHHHHHHHHTTEEET CS
       RRM_1   1 lfVgnL.ppdvteeeLkelFskfGpiksiklvrdetgkskgfafVeFeskedAekAlealngkklg 65 
                 ++V+n+  ++ +e++++ +F +fG i++i+l+       k+ a+ +++s  +A+ A +   +  ++
  KHJ35528.1 361 IVVENIpEENFNEDNVRSFFTQFGTIVEISLYQY-----KRLAILKYDSWNSANLAYK-SPKVIFD 420
                 7899**55789**********************6.....**************99988.5555555 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 2.3
                 TSCEEEEEEEEETTTSEEEEEEEEESSHHHHHH CS
       RRM_1  22 fGpiksiklvrdetgkskgfafVeFeskedAek 54 
                 +G++++i++ +          +++F++++ Ae+
  KHJ35528.1 677 IGEYEDIEVTP-------SRTIITFKDRRTAES 702
                 55666666655.......345788888888875 PP

>> Nup35_RRM_2  Nup53/35/40-type RNA recognition motif
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.6   0.0   5.4e-07    0.0014       2      53 .]     359     412 ..     358     412 .. 0.89
   2 ?   -0.5   0.0      0.51   1.3e+03      24      50 ..     677     701 ..     674     702 .. 0.72

  Alignments for each domain:
  == domain 1  score: 18.6 bits;  conditional E-value: 5.4e-07
  Nup35_RRM_2   2 twvaVsGydteli..elVlehFasfGeIvkhyvpkevsvmyvkfesekdaekAL 53 
                  t+++V+ ++ e +  + V+ +F +fG Iv+++  + + ++++k+ s  +a+ A+
   KHJ35528.1 359 TTIVVENIPEENFneDNVRSFFTQFGTIVEISLYQYKRLAILKYDSWNSANLAY 412
                  78888888888886577*****************************99999885 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.51
  Nup35_RRM_2  24 fGeIvkhyvpkevsvmyvkfesekdae 50 
                  +Ge  +++v++++ +  ++f++++ ae
   KHJ35528.1 677 IGEYEDIEVTPSRTI--ITFKDRRTAE 701
                  889999999985555..5555988887 PP

>> zf-CCCH  Zinc finger C-x8-C-x5-C-x3-H type (and similar)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.4   2.1   5.9e-07    0.0015       4      27 .]     246     269 ..     244     269 .. 0.93

  Alignments for each domain:
  == domain 1  score: 18.4 bits;  conditional E-value: 5.9e-07
                 HCBCHHHHHS--TTGGG-SSBSCS CS
     zf-CCCH   4 elCrffmrtGyCkyGdrCkFaHgq 27 
                  +Cr++   G+C +G +CkF Hg+
  KHJ35528.1 246 QRCRDYDVKGFCARGITCKFEHGE 269
                 58********************95 PP

>> Mgr1  Mgr1-like, i-AAA protease complex subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.9   0.1   7.2e-06     0.018     147     224 ..     367     447 ..     301     454 .. 0.69
   2 ?   -2.0   2.6      0.49   1.2e+03     289     322 ..     488     521 ..     459     573 .. 0.45

  Alignments for each domain:
  == domain 1  score: 13.9 bits;  conditional E-value: 7.2e-06
        Mgr1 147 kssrfas.lkkvlylltGsvllsqslLeaarltllkYDPWleeaksvrdkk.ff.ndiikyY.heGiDPtkvkvkdaasGna 224
                  +++f++   + ++  +G+++   sl    rl +lkYD W     + +  k +f n  +k Y  +  DP+  +  d+ sG++
  KHJ35528.1 367 PEENFNEdNVRSFFTQFGTIV-EISLYQYKRLAILKYDSWNSANLAYKSPKvIFdNRFVKVYwFDEHDPQLKNKDDSISGTI 447
                 445554313467788899876.779***************998888776553453668885526778887555556667764 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.49
        Mgr1 289 askellekikhteeeleelieknkenrekilkkl 322
                 + ke+    k+ e   eel + ++e+++k ++++
  KHJ35528.1 488 KRKEMEAAKKELEIRQEELLKCQAEEKRKLMERI 521
                 1111111111111111222233333333333332 PP

>> Atg14  Vacuolar sorting 38 and autophagy-related subunit 14
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.8   9.4   0.00029      0.75      33     170 ..     435     567 ..     430     593 .. 0.71

  Alignments for each domain:
  == domain 1  score: 8.8 bits;  conditional E-value: 0.00029
       Atg14  33 klksekeslkkkiekalegkeeaeqledkiknkkakleelksliadlrerlqelkdklsqlkkeieekkkklaklsdklkkRrsdleslqneleerrkk 131
                 +lk + +s+ + i+++++g   + +++++ k + +   +++++ ++l+ ++q+ ++ ++  kke+e+++++l k++++ k++  +    +   +er ++
  KHJ35528.1 435 QLKNKDDSISGTINQKITGAPIPARETSEPKIDLEEFARKQQEAQELHIEKQKKRKEMEAAKKELEIRQEELLKCQAEEKRKLME----RIAAKERNRE 529
                 689999*********************************************************************9998733222....2222233333 PP

       Atg14 132 qiaklqdaikrieqklsslssktlesrsslcselaklyg 170
                    +l  +   +++k ss +++ l++++  ++  a+l g
  KHJ35528.1 530 TTLGLEADSLGSTDK-SSSQTEALKAQLAALEAEAQLLG 567
                 333333333333322.33444444444555555555555 PP

>> FHIPEP  FHIPEP family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.2   2.0   0.00059       1.5     310     403 ..     473     566 ..     444     580 .. 0.75

  Alignments for each domain:
  == domain 1  score: 7.2 bits;  conditional E-value: 0.00059
                 XXXXXXXXXXXXX........TS-EEEEE-GGGHHHHHHT.......HHHHHHHHHHHHHSS---SEEEEE-TT--TTEEEEEETTEEEEEEE- CS
      FHIPEP 310 eeeeaeeeeeeeeeeveellkvdplelelgyeliplvdeeqggeLlerikalrkqlaeelGlvvpeirirdnlelkpneyrikikgvevaegel 403
                 +++++++e + e+++  +++++ + ele+ +e +  +++e++++L+eri+a  ++  + lGl   ++  +d+ + ++++ + ++   e++ + l
  KHJ35528.1 473 RKQQEAQELHIEKQKKRKEMEAAKKELEIRQEELLKCQAEEKRKLMERIAAKERNRETTLGLEADSLGSTDKSSSQTEALKAQLAALEAEAQLL 566
                 222222222223366778888999999999998888999999*****************************99999999988888777766655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (791 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1674  (0.0933683); expected 358.6 (0.02)
Passed bias filter:                      651  (0.0363099); expected 358.6 (0.02)
Passed Vit filter:                        75  (0.00418317); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 0.75u 0.25s 00:00:01.00 Elapsed: 00:00:00.39
# Mc/sec: 6033.05
//
Query:       KHJ35529.1  [L=199]
Description: hypothetical protein EV44_g0873 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.079   12.7   0.0       0.14   12.0   0.0    1.4  1  Imm48     Immunity protein 48
        0.7    9.8   4.9        1.1    9.1   4.9    1.2  1  CemA      CemA family
        3.1    8.8   6.6          8    7.5   0.5    2.4  2  DUF4266   Domain of unknown function (DUF4266)


Domain annotation for each model (and alignments):
>> Imm48  Immunity protein 48
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.3e-05      0.14      92     120 ..      56      84 ..      37      86 .. 0.91

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.3e-05
       Imm48  92 iihRGiegyyqykekkeeelkkdfediie 120
                 + h G  g+ +y  k++e++++df+++++
  KHJ35529.1  56 VTHEGTTGFKDYDLKDYEQVRNDFHEVLT 84 
                 78************************986 PP

>> CemA  CemA family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.1   4.9   0.00019       1.1      32     113 ..     109     189 ..     102     192 .. 0.87

  Alignments for each domain:
  == domain 1  score: 9.1 bits;  conditional E-value: 0.00019
        CemA  32 eplvdrflekeqaelflnkeleeealeelkefeekleleeligeapelseeeieeelkekaeelakeyreesseaiknifad 113
                 +p+v+rf +++ ++  +++e++e+  +  +  e  l++++l++ ++  ++++i++e++ +a++l++  +++ +++ k+ fad
  KHJ35529.1 109 NPWVERFEREKLQKERMTREQNEREAKVAAMGEGILNIDALVRDTEIEERKRIQQEMEVEARKLEEARKRR-QQSAKEKFAD 189
                 69******999999999999999999999999*************99999*************98765555.5555666665 PP

>> DUF4266  Domain of unknown function (DUF4266)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    7.5   0.5    0.0013         8       1      25 [.     112     136 ..     112     140 .. 0.86
   2 ?    4.1   1.0     0.015        90      11      35 ..     162     186 ..     156     197 .. 0.82

  Alignments for each domain:
  == domain 1  score: 7.5 bits;  conditional E-value: 0.0013
     DUF4266   1 VkpyergnLadpeMalsrdpleekl 25 
                 V+ +er++L ++ M+ +++++e k+
  KHJ35529.1 112 VERFEREKLQKERMTREQNEREAKV 136
                 7889***********9988887765 PP

  == domain 2  score: 4.1 bits;  conditional E-value: 0.015
     DUF4266  11 dpeMalsrdpleekleehiyssrEa 35 
                 ++eM++++ +lee+ ++  +s++E 
  KHJ35529.1 162 QQEMEVEARKLEEARKRRQQSAKEK 186
                 679******************9995 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (199 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1752  (0.0977188); expected 358.6 (0.02)
Passed bias filter:                      685  (0.0382063); expected 358.6 (0.02)
Passed Vit filter:                        54  (0.00301188); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.48u 0.25s 00:00:00.73 Elapsed: 00:00:00.42
# Mc/sec: 1438.27
//
Query:       KHJ35530.1  [L=561]
Description: putative sun domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    6.9e-79  264.8  12.2      1e-78  264.2  12.2    1.2  1  SUN        Beta-glucosidase (SUN family)


Domain annotation for each model (and alignments):
>> SUN  Beta-glucosidase (SUN family)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  264.2  12.2   5.8e-83     1e-78       4     245 .]      74     322 ..      71     322 .. 0.95

  Alignments for each domain:
  == domain 1  score: 264.2 bits;  conditional E-value: 5.8e-83
         SUN   4 ikCsefpsdeglvavdalgl.gGwagiqdvkgesqeCkegsyCsyaCppGylktqw.psa..qgatgssvGGLyCnkdGklektnkdskklCekgagkv 98 
                  kC+ fps++gl +++++++ +Gwa+ +d     ++C++gsyC+yaCp+G++++qw p+a  +++++s+ GGLyC++ G+++k+++d k++C++g+g+v
  KHJ35530.1  74 GKCE-FPSNAGLTPITPHAKnAGWAMAPD-----EQCSPGSYCPYACPSGMVMAQWnPNAkaYTYPQSMDGGLYCDQYGQVKKPFPD-KPYCVSGTGGV 165
                 6899.***********99998********.....78********************988788*************************.*********** PP

         SUN  99 kvknklsksvavCrTdyPGtEamlipteveagssaelavpdedtyykwkgkktsaqYYvNkaGvsvedaCvWgseskpvGNwaplvlGagkdedgktyl 197
                  ++nk++k v++C+T++PG E+mlipt+ve  + ++lavp++++   w+  kt+a+YY+N++Gv+ve+aCvWg+e+kpvGNw+p+v+Ga++de+g+t++
  KHJ35530.1 166 GAHNKVGKGVSFCQTVLPGGESMLIPTHVE--NLTDLAVPGTNY---WC--KTAAHYYINPPGVKVEEACVWGDETKPVGNWSPYVAGANTDESGQTFV 257
                 *****************************9..999*********...**..************************************************ PP

         SUN 198 sifqNp......tskeklnfnvkieaeegdsvsgkCkye...........sgklskgggadgCtv 245
                 ++++Np      +s++ l+f+vki+++  ++++ +C+++            +k+++ ggad+C+v
  KHJ35530.1 258 KVGWNPiftgskLSSTPLQFGVKITCDGTGCNGIPCTIDpavggvgkvqsINKSTGAGGADFCVV 322
                 ******9**99999*******************************99885444444478****98 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (561 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       854  (0.0476323); expected 358.6 (0.02)
Passed bias filter:                      319  (0.0177924); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.59u 0.28s 00:00:00.87 Elapsed: 00:00:00.45
# Mc/sec: 3757.78
//
Query:       KHJ35531.1  [L=289]
Description: putative arv1-like family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-77  259.3   0.4    4.5e-77  258.9   0.4    1.1  1  Arv1      Arv1-like family
  ------ inclusion threshold ------
       0.31   11.6   1.0         18    6.0   0.1    2.4  2  PQQ_3     PQQ-like domain


Domain annotation for each model (and alignments):
>> Arv1  Arv1-like family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  258.9   0.4   5.1e-81   4.5e-77       1     210 []       3     219 ..       3     219 .. 0.92

  Alignments for each domain:
  == domain 1  score: 258.9 bits;  conditional E-value: 5.1e-81
        Arv1   1 iCieCgepvksLytkYskg.......nirltkCknCkkvaDkYvEfdnvilfiDllLlkpqaYrHllfNtlereeekfekikslirlvillllfevylt 92 
                 iC+eC+ pv++Lyt+Ys +        +rlt+C+nC+ ++DkYvE+d+v+lfiDl+L+kpq+YrHll+Nt++ree++f+  +s+irl+illllf+vylt
  KHJ35531.1   3 ICVECRFPVRTLYTEYSGAddkssghGVRLTVCQNCGCFCDKYVEHDHVVLFIDLVLIKPQVYRHLLHNTFMREEDRFD--PSIIRLGILLLLFDVYLT 99 
                 8***************9999999999*****************************************************..****************** PP

        Arv1  93 wariekksesessslsaqaivle..sakelkqylfflvlalletlvfhlsillllslesslsa...lllkykkarlnalltalllssyaklfpilmlIW 186
                 wariek+++s++ +   + ++l+  ++  + qylffl+l+++++l+fhlsi++l+s+  s+     ll++y+  r+n+++tall+ss++klfpilm+IW
  KHJ35531.1 100 WARIEKQTSSSTANPYDSTNFLRlaQKPIIFQYLFFLILCTISNLAFHLSIRFLTSSLHSPLVktgLLPRYS--RPNSVSTALLVSSSTKLFPILMVIW 196
                 ******9666666555555554411556788************************99777666788788888..************************* PP

        Arv1 187 eydltalalslikllvllsnveal 210
                 eyd++a+a+  ++++v+++nveal
  KHJ35531.1 197 EYDIPAAAR-SLGWAVVANNVEAL 219
                 ********7.*************7 PP

>> PQQ_3  PQQ-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.7   0.1      0.01        93       3      18 ..     194     211 ..     194     216 .. 0.71
   2 ?    6.0   0.1     0.002        18       3      27 ..     248     275 ..     247     277 .. 0.71

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 0.01
       PQQ_3   3 vlWsvqlpgpvnssp...a 18 
                 v+W++++p+++ +s+   +
  KHJ35531.1 194 VIWEYDIPAAA-RSLgwaV 211
                 79******977.5666643 PP

  == domain 2  score: 6.0 bits;  conditional E-value: 0.002
       PQQ_3   3 vlWsv...qlpgpvnsspavdgglvyvg 27 
                 +lW++   +++  +n s+av g lvyv+
  KHJ35531.1 248 ILWAThldKVDTVGNLSVAVHGKLVYVV 275
                 689995554444444567********97 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (289 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       540  (0.0301188); expected 358.6 (0.02)
Passed bias filter:                      320  (0.0178482); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.43u 0.20s 00:00:00.63 Elapsed: 00:00:00.37
# Mc/sec: 2369.28
//
Query:       KHJ35532.1  [L=744]
Description: hypothetical protein EV44_g1227 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (744 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1575  (0.0878465); expected 358.6 (0.02)
Passed bias filter:                      473  (0.0263818); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.67u 0.23s 00:00:00.90 Elapsed: 00:00:00.41
# Mc/sec: 5450.54
//
Query:       KHJ35533.1  [L=448]
Description: hypothetical protein EV44_g3752 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (448 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1147  (0.0639746); expected 358.6 (0.02)
Passed bias filter:                      258  (0.0143901); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.52u 0.22s 00:00:00.74 Elapsed: 00:00:00.42
# Mc/sec: 3222.74
//
Query:       KHJ35534.1  [L=295]
Description: putative mitochondrial outer membrane protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.8e-19   68.5   0.0    1.4e-18   67.5   0.0    1.5  1  GST_N_4   Glutathione S-transferase N-terminal domain
    3.3e-18   65.2   0.0    6.1e-18   64.4   0.0    1.5  1  GST_C_6   Glutathione S-transferase, C-terminal domain
    5.4e-13   49.3   0.1    8.8e-13   48.7   0.1    1.3  1  Tom37     Outer mitochondrial membrane transport complex prot
    0.00012   22.3   0.6    0.00022   21.5   0.2    1.6  2  SAM35     SAM35, subunit of SAM coomplex
    0.00093   19.2   0.0     0.0015   18.5   0.0    1.4  1  GST_C_2   Glutathione S-transferase, C-terminal domain


Domain annotation for each model (and alignments):
>> GST_N_4  Glutathione S-transferase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.5   0.0   3.9e-22   1.4e-18       1      99 []      70     170 ..      70     170 .. 0.83

  Alignments for each domain:
  == domain 1  score: 67.5 bits;  conditional E-value: 3.9e-22
     GST_N_4   1 pfclkletyLrmagipyelepssnemhaspkgklPfiel..ngel........liadsefiieflkekgvdldaelseeqkadaralkalveeklynal 89 
                 p+clk++t+L++agi++ +  s+n  hasp g+lPf+ +  ng           +ad  +++++ ke+g    a+++e   +++ a+++l++ +++na+
  KHJ35534.1  70 PSCLKWQTFLKIAGIDHSIIASNN--HASPIGSLPFLLPalNGADsfsdignpIVAD--KMVKYSKEQG----ANVEEVSNMRSAAYQSLLDYRIRNAW 160
                 89*********************9..9**********99556655566555533333..6666666666....7788888899**************** PP

     GST_N_4  90 lyerwldpen 99 
                 ly+ +l+++n
  KHJ35534.1 161 LYFQYLESRN 170
                 *****99887 PP

>> GST_C_6  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.4   0.0   1.7e-21   6.1e-18       1      64 []     221     287 ..     221     287 .. 0.97

  Alignments for each domain:
  == domain 1  score: 64.4 bits;  conditional E-value: 1.7e-21
     GST_C_6   1 akkdleaLselLgdkkyFfG.dkPtslDAlvFGhlaqilytplesp..elrellkeypNLvayceri 64 
                 a+k++eaLs lLg++ +FfG ++P+ +DA+vF++ +++l++++++   +l + l+  +NLv+++eri
  KHJ35534.1 221 ADKAFEALSILLGENSWFFGnERPSLFDASVFAYSHLLLDENMGWLetKLCRTLQTRKNLVQHRERI 287
                 689*****************888**********************999******************8 PP

>> Tom37  Outer mitochondrial membrane transport complex protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.7   0.1   2.4e-16   8.8e-13       1     111 [.      72     182 ..      72     191 .. 0.81

  Alignments for each domain:
  == domain 1  score: 48.7 bits;  conditional E-value: 2.4e-16
       Tom37   1 ClaviaylkllalapfevvessnpslsptgeLPaLkdgegtwisgfdnIveylrkks.....eesdldaslsakekadatAlisllesklaplllysly 94 
                 Cl+ +++lk++++ + ++++s+n+ +sp g+LP+L     +  ++f++I + + + +     +  +  a++++  ++ ++A+ sll+ ++++++ly+ y
  KHJ35534.1  72 CLKWQTFLKIAGI-DHSIIASNNH-ASPIGSLPFLLPAL-NGADSFSDIGNPIVADKmvkysK--EQGANVEEVSNMRSAAYQSLLDYRIRNAWLYFQY 165
                 *********8888.9*****9975.7*********8855.44566666666666555543211..1124788999************************ PP

       Tom37  95 vnsenyekvTrpayskl 111
                 ++s+n++kv  p+y + 
  KHJ35534.1 166 LESRNFNKVAYPLYVSS 182
                 **************986 PP

>> SAM35  SAM35, subunit of SAM coomplex
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   21.5   0.2   6.2e-08   0.00022       1      44 [.      16      59 ..      16      74 .. 0.84
   2 ?   -3.0   0.0       2.3   8.3e+03     108     125 ..      87     104 ..      80     105 .. 0.81

  Alignments for each domain:
  == domain 1  score: 21.5 bits;  conditional E-value: 6.2e-08
       SAM35  1 lkvPspvkkvFdkfPlktYepveksdeaakkeiesrsyeFegns 44
                ++vP+pvkk+Fdk+P++ Y+p +  +++++ +     y F+ ++
  KHJ35534.1 16 FSVPTPVKKIFDKVPIVIYPPNRLPQRSSSCDNFPSLYVFSREQ 59
                78*******************99988888888888888885444 PP

  == domain 2  score: -3.0 bits;  conditional E-value: 2.3
       SAM35 108 slvvlsekaskdeeLPiL 125
                 s++  +++as+  +LP+L
  KHJ35534.1  87 SIIASNNHASPIGSLPFL 104
                 677778999999999998 PP

>> GST_C_2  Glutathione S-transferase, C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   18.5   0.0   4.2e-07    0.0015       4      43 ..     214     254 ..     200     286 .. 0.87

  Alignments for each domain:
  == domain 1  score: 18.5 bits;  conditional E-value: 4.2e-07
                 HCHHHHHCCHCHHHCTTT---SS.CTTC.S--HHHHHHHHH CS
     GST_C_2   4 veraleqldaaldaleahLadspflfGd.qptlaDialapf 43 
                 ++++  ++d+a++al+ +L+  +++fG+ +p+l D+++++ 
  KHJ35534.1 214 IDDIYSEADKAFEALSILLGENSWFFGNeRPSLFDASVFAY 254
                 5678899****************777777*******99986 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (295 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       403  (0.0224776); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               5  [number of targets reported over threshold]
# CPU time: 0.43u 0.23s 00:00:00.66 Elapsed: 00:00:00.39
# Mc/sec: 2279.21
//
Query:       KHJ35535.1  [L=224]
Description: putative tetraspanin [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.3e-06   25.7  10.1    1.5e-05   24.9  10.1    1.3  1  Tetraspanin  Tetraspanin family
  ------ inclusion threshold ------
       0.72    9.2   0.0       0.72    9.2   0.0    2.4  3  DUF4191      Domain of unknown function (DUF4191)
        4.2    7.1   0.0        4.2    7.1   0.0    3.6  5  FeoB_C       Ferrous iron transport protein B C terminus


Domain annotation for each model (and alignments):
>> Tetraspanin  Tetraspanin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.9  10.1   2.4e-09   1.5e-05       6     227 ..      10     203 ..       6     205 .. 0.71

  Alignments for each domain:
  == domain 1  score: 24.9 bits;  conditional E-value: 2.4e-09
                  XXXXXXXXXXXXXXXXXXXXXXX.....XXX.....................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                  xxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
  Tetraspanin   6 fffnllfwligivllavGvwlrl.....khaeaalacllsesaedpailaillivvGvllfllgflGcigalkenkcllltfsllllvlfllelaagi 98 
                  ++f llf ++gi+ll+ ++ +++      + e+  ++l  +s+  +a++a++++v+  ++f++++  + + + +    l+ +++++  +f + l+++i
   KHJ35535.1  10 VVFDLLFAITGIILLITALSMQSqlsqtPNLENVAKNLILDSCPLKAAIANGILVL--AIFVMSIPSIAMPRARGLLKLTGYFVFVSAVFTMVLGLTI 105
                  6899*************988877888763333444455555666666666666666..77888888888888888899999***************** PP

                  XXX--HHH........HHHHHHHHHHHHHHHHHHTHHHHHHHHHHT---SSHH..HHGSSTT-SSSCGCC......................S--HHH CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxx RF
  Tetraspanin  99 lgfvfsdkargkvseiinnaievkyrddldlkkcqnlldslqkklsCCGvnsykDwsdnpsrencsvPes....CclptpnqayleasksiytegCid 192
                  ++ +++ +          +++   ++ + d     +  + lq+k++CCG    ++          s+P+     C  pt+            + gC  
   KHJ35535.1 106 WFETLKTR----------KNLLAIWKMQ-D----VSVQSLLQTKYQCCGY---TN--------STSPPFVvdntCPNPTI---------AAARLGCVF 168
                  99999999..........3332333322.2....3566899********4...33........35556553333777764.........34599***9 PP

                  HHHHHC--XXXXX.XXXX.XXX..XXXXXXXXXXXXX CS
                  xxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxx RF
  Tetraspanin 193 klvnwiksnlkllgggvaalgl..iqlvgillslilc 227
                   ++ + ++ l ++ ++++ +g+  +  + il + il+
   KHJ35535.1 169 PFSAFANNFLDVI-FTAI-FGMvgVDALFILATAILL 203
                  9999999999999.4444.333358888888888775 PP

>> DUF4191  Domain of unknown function (DUF4191)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.4   0.2      0.42   2.5e+03      51      62 ..      14      25 ..       4      39 .. 0.44
   2 ?   -0.9   1.3      0.14   8.6e+02      43      70 ..      81     108 ..      55     128 .. 0.58
   3 ?    9.2   0.0   0.00012      0.72      29      86 ..     159     220 ..     151     223 .. 0.78

  Alignments for each domain:
  == domain 1  score: -2.4 bits;  conditional E-value: 0.42
     DUF4191 51 illlilgillgl 62
                +l+ i+gi+l +
  KHJ35535.1 14 LLFAITGIILLI 25
                223333333222 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.14
     DUF4191  43 lglllgslilllilgillgllvalivlt 70 
                  gll  + +++ + ++++ +l  +i+++
  KHJ35535.1  81 RGLLKLTGYFVFVSAVFTMVLGLTIWFE 108
                 4444334455555555555555555554 PP

  == domain 3  score: 9.2 bits;  conditional E-value: 0.00012
     DUF4191  29 llaaflvvvvvfvvlglllgslilllilgil....lgllvalivltrraekaayaqiegqpG 86 
                 ++aa l+ v  f ++   + ++i++ i+g++    l +l++ i+l+ r e+a y+qi ++ G
  KHJ35535.1 159 IAAARLGCVFPFSAFANNFLDVIFTAIFGMVgvdaLFILATAILLKDRKEQARYRQIFEKNG 220
                 566666666666666666778888888888777767888999999************99888 PP

>> FeoB_C  Ferrous iron transport protein B C terminus
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   1.4      0.37   2.2e+03       5      20 ..       9      24 ..       5      34 .. 0.53
   2 ?   -2.9   0.0      0.92   5.5e+03      40      49 ..      37      46 ..      36      48 .. 0.81
   3 ?    7.1   0.0   0.00071       4.2      31      50 ..      68      87 ..      61      88 .. 0.93
   4 ?   -3.8   0.5       1.8   1.1e+04       7      16 ..      93     102 ..      90     107 .. 0.53
   5 ?    5.1   0.0    0.0031        18       1      21 [.     185     205 ..     185     212 .. 0.88

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.37
      FeoB_C  5 Yllgilvallvalllk 20
                Y++  l++ +++++l 
  KHJ35535.1  9 YVVFDLLFAITGIILL 24
                4444445555555553 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.92
      FeoB_C 40 lPslknvlik 49
                 P+l nv+++
  KHJ35535.1 37 TPNLENVAKN 46
                699***9986 PP

  == domain 3  score: 7.1 bits;  conditional E-value: 0.00071
      FeoB_C 31 fvmELPpYrlPslknvlikt 50
                fvm +P   +P+++ +l+ t
  KHJ35535.1 68 FVMSIPSIAMPRARGLLKLT 87
                9***************9976 PP

  == domain 4  score: -3.8 bits;  conditional E-value: 1.8
      FeoB_C   7 lgilvallva 16 
                 ++ +++++++
  KHJ35535.1  93 VSAVFTMVLG 102
                 4444444444 PP

  == domain 5  score: 5.1 bits;  conditional E-value: 0.0031
      FeoB_C   1 lfslYllgilvallvalllkk 21 
                 +f++  +  l++l++a+llk 
  KHJ35535.1 185 IFGMVGVDALFILATAILLKD 205
                 699****************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (224 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       761  (0.0424452); expected 358.6 (0.02)
Passed bias filter:                      367  (0.0204696); expected 358.6 (0.02)
Passed Vit filter:                        33  (0.00184059); expected 17.9 (0.001)
Passed Fwd filter:                         5  (0.000278878); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.41u 0.24s 00:00:00.64 Elapsed: 00:00:00.37
# Mc/sec: 1821.39
//
Query:       KHJ35536.1  [L=209]
Description: putative cupin domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-09   37.5   0.0    0.00011   21.9   0.0    2.7  3  Cupin_2     Cupin domain
    5.1e-06   26.2   0.0    6.8e-06   25.8   0.0    1.3  1  Cupin_1     Cupin
  ------ inclusion threshold ------
      0.092   12.5   0.0       0.12   12.0   0.0    1.2  1  UL141       Herpes-like virus membrane glycoprotein UL141
       0.22   11.1   0.0       0.28   10.7   0.0    1.1  1  Paralemmin  Paralemmin


Domain annotation for each model (and alignments):
>> Cupin_2  Cupin domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.0      0.76   3.4e+03      56      70 ..      38      52 ..      32      53 .. 0.76
   2 !   12.7   0.0   1.7e-05     0.077       3      32 ..      75     105 ..      73     110 .. 0.89
   3 !   21.9   0.0   2.4e-08   0.00011      40      70 ..     131     161 ..     125     162 .. 0.92

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.76
                EEEE-SSS-EEEEEE CS
     Cupin_2 56 rfrNtgdeparllvv 70
                +f+++gd++++++ v
  KHJ35536.1 38 TFVCAGDKDLEIINV 52
                577888998888776 PP

  == domain 2  score: 12.7 bits;  conditional E-value: 1.7e-05
                 EEEETTE.EEEEECSSSEEEEEEEEESEEEE CS
     Cupin_2   3 velppGe.sapshrHpgedeffyVleGegel 32 
                 v+l+p++    + +H+ +d +fy+ +G++++
  KHJ35536.1  75 VTLAPNTpGPIPMWHRMNDTTFYITKGRLRF 105
                 799****7777999**************987 PP

  == domain 3  score: 21.9 bits;  conditional E-value: 2.4e-08
                 EEETTEEEEE-TT-EEEEEE-SSS-EEEEEE CS
     Cupin_2  40 eleaGdsvyfpagtpHrfrNtgdeparllvv 70 
                 +++aGd++++p+   H+f N+ de+a +l  
  KHJ35536.1 131 IVKAGDYIVVPPCAIHNFDNPFDEEAAFLNT 161
                 79************************99975 PP

>> Cupin_1  Cupin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.8   0.0   1.5e-09   6.8e-06      31     115 ..      70     163 ..      43     194 .. 0.71

  Alignments for each domain:
  == domain 1  score: 25.8 bits;  conditional E-value: 1.5e-09
                 STEEEEEEEE..TTEEEEEEEESSS-EEEEEEESEEEEEEEETTSS.............EEEEEE.....EETTEEEEE-TT-EEEEEEESSSSEEEEE CS
     Cupin_1  31 lgisaarvdl.epgglllPhyhpnateiayvlqGegrvgfvvpgng............nrdfhkk.....lreGdvfvvPaglvhfqynsgdepavaiv 111
                  g +++ ++  +pg +  P +h      +y+++G++r+ + +++ +            +     +     +++Gd +vvP+  +h + n  de+a  + 
  KHJ35536.1  70 FGAVSVTLAPnTPGPI--PMWHRMNDTTFYITKGRLRFFISSSA-PssclntscisesK-----EkpfriVKAGDYIVVPPCAIHNFDNPFDEEAA-FL 159
                 4444444444344433..99**9999***********5555555.55***988664322.....245678********************855554.44 PP

                 EEES CS
     Cupin_1 112 vfdt 115
                    t
  KHJ35536.1 160 NTFT 163
                 4444 PP

>> UL141  Herpes-like virus membrane glycoprotein UL141
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.0   0.0   2.8e-05      0.12     124     188 ..      66     132 ..      48     135 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.0 bits;  conditional E-value: 2.8e-05
                 ------S--SSSB-B-SS..GGGEEEESSS-------EEEEE----------------S--TTCCHH CS
       UL141 124 cdlalGrrsltdqlwspd..psrlrsidcGlererqrvvfyigradaedclkpaceeeerelcvtvi 188
                  d  +G  s t    +p   p+  r  d  ++  + r  f+i+ +    cl  +c  e +e+ + ++
  KHJ35536.1  66 TDNRFGAVSVTLAPNTPGpiPMWHRMNDTTFYITKGRLRFFISSSAPSSCLNTSCISESKEKPFRIV 132
                 45578888887766666511567799********************************999877765 PP

>> Paralemmin  Paralemmin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   6.3e-05      0.28     188     231 ..       5      48 ..       1      51 [. 0.87

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 6.3e-05
  Paralemmin 188 tparkeitgveaqpqeatslaeegaeaskeqPVTmiFmGYqnve 231
                 ++a ++itgv++++q+++s++++ ++ +ke+PVT +  G +++e
  KHJ35536.1   5 KKALNSITGVRNDAQDKNSTGRAHQQYTKEKPVTFVCAGDKDLE 48 
                 5556899*****************************99988876 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (209 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       510  (0.0284455); expected 358.6 (0.02)
Passed bias filter:                      477  (0.0266049); expected 358.6 (0.02)
Passed Vit filter:                        27  (0.00150594); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.42u 0.26s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1552.11
//
Query:       KHJ35537.1  [L=136]
Description: putative protein rai1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (136 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       452  (0.0252106); expected 358.6 (0.02)
Passed bias filter:                      371  (0.0206927); expected 358.6 (0.02)
Passed Vit filter:                        26  (0.00145016); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.39u 0.23s 00:00:00.62 Elapsed: 00:00:00.38
# Mc/sec: 1069.11
//
Query:       KHJ35538.1  [L=1939]
Description: putative nf-x1 finger and helicase domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    9.2e-40  136.4   0.1    3.2e-39  134.6   0.1    2.0  1  AAA_12    AAA domain
    7.9e-20   71.7   3.1    1.2e-19   71.1   0.0    2.5  2  AAA_11    AAA domain
      1e-06   29.1   0.0    6.2e-05   23.4   0.0    2.6  2  AAA_19    AAA domain
      9e-05   21.9   5.2       0.15   11.2   0.2    3.6  3  DUF2075   Uncharacterized conserved protein (DUF2075)
    0.00032   20.5   0.0    0.00075   19.3   0.0    1.7  1  UvrD_C_2  UvrD-like helicase C-terminal domain
  ------ inclusion threshold ------
      0.011   15.5   0.0       0.31   10.7   0.0    2.3  2  AAA_30    AAA domain
      0.085   13.0   0.0       0.35   11.0   0.0    2.1  1  RcsD_ABL  RcsD-ABL domain


Domain annotation for each model (and alignments):
>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.6   0.1   1.3e-42   3.2e-39       1     198 [.     949    1182 ..     949    1183 .. 0.87

  Alignments for each domain:
  == domain 1  score: 134.6 bits;  conditional E-value: 1.3e-42
      AAA_12    1 lerSlferllkke....kekvvlLdtqYRmhpeIsrfpsklfYkgkLkdaesvkkreleaqealeepleplvfidvekseeekekke...ksyiNee 90  
                  l+rSlferl+  e    k ++  L +q Rm+p Is++ + ++Y  +L d+esvk+ +           ++++f+d ++ ee+k+++    ksy+N  
  KHJ35538.1  949 LDRSLFERLSLGEngvkKLPMAQLYIQRRMRPGISNLIK-EIYP-NLADHESVKDLPDI-----IGLRNNIFFLDHKNLEENKSEHGnsiKSYTNLW 1038
                  689******998889999999***************976.5787.599****9998877.....777888*****998888877655788******* PP

      AAA_12   91 EaelvvklvekllkkgseeerkkigvitpYraqvellkkklke.......keeekseke.....................................i 143 
                  E+++++ lv++l+ +gs +   +i+v+tpY  q++ l++k+++       +       +                                     i
  KHJ35538.1 1039 EIDMIFALVRHLVLQGSYN-SGDIAVLTPYGGQLQKLRSKFQSefeiilsD-------QdqelvknglfvednehkdilnkesleikpskknisnlI 1127
                  ******************9.8*********************944444441.......34455555666666666667777777778888889999* PP

      AAA_12  144 evntvdgfQGrekdviilslVRsnekkeigflkderrlNValTRAkskliivGnk 198 
                  +++tvd+fQG+e +v+i+slVRsn++k++gflk ++r+NV l+RAk+ l+++Gn+
  KHJ35538.1 1128 RIATVDNFQGEEAKVVIVSLVRSNKEKKVGFLKTRNRINVLLSRAKHGLYLIGNA 1182
                  *****************************************************97 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.1   0.0   4.7e-23   1.2e-19       3     258 ..     606     932 ..     604     934 .. 0.80
   2 ?   -1.7   2.0       0.8     2e+03     130     186 ..    1626    1686 ..    1580    1717 .. 0.46

  Alignments for each domain:
  == domain 1  score: 71.1 bits;  conditional E-value: 4.7e-23
      AAA_11   3 ndsqreaiksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCapSNaAvDellerllrglldsegekykpkivRvgnee..er 99 
                 + sq++a+  al ++ ++ iqGPPGtgK++  + l+++ll       +k     i v   +N A D+ le ll+            ki+Rvg+++  e+
  KHJ35538.1 606 DCSQAKALVCALCQE-FVQIQGPPGTGKSFLGLNLMQVLLD----IPSKYLIGPIIVVCYTNHALDQFLENLLK--------FGVHKIIRVGAQSkvEE 691
                 668999999999998.59*********************54....3455666666666689*************........66679********9989 PP

      AAA_11 100 iseavksvsleekvekrlekeekaqlakeiskeleklakelrafeeeeek................................................. 149
                  +e++ +v  ++  + ++e  +    ++ ++k+++++ + l++ ++  ++                                                 
  KHJ35538.1 692 LQEKNLKVVAKTNASTKYERYRLYVANDLMEKKQNPVTQYLNELKNIRTNlswnsvktllaeeypkiyeqlqhlfadeyqfvqfaqldpfdlwlqedve 790
                 9999999999999999999999777777777777777777777777766678899999999************************************** PP

      AAA_11 150 ...............................eklkkskekskskleqerrklkk..erkelskeleeaeesleeevldeaeivltTlsgags..kllek 213
                                                ++++k + +++ +++   + l+     k+ ++e  ++ +++e+ vl++a+++  T sg +   ++l++
  KHJ35538.1 791 nfeelckikdptipqllelankniysisnsgRRKLKDFWTFELQEKIADNLLEGftDYKTAKQERSKILNEVERRVLQDAQVIGVTFSGFAGniDVLQH 889
                 ***********9999999999999988766633333333333333333222222002233344444444555699*************98441245666 PP

      AAA_11 214 lakkfdvviIDEAaqavEpstliPlrlgakkvvLvGDpkQLpatv 258
                 +  k +v+   EA+  +E+  l +l+  +++v+ +GD+ QL++t+
  KHJ35538.1 890 V--KAKVLFCEEAGEVLEAHFLTALLPSIEHVISIGDHMQLRPTI 932
                 6..9****************************************9 PP

  == domain 2  score: -1.7 bits;  conditional E-value: 0.8
      AAA_11  130 skeleklakelrafeeeeek........eklkkskekskskleqerrklkkerkelskeleeaee 186 
                  +k++ ++++ l++f++e  +        +    + +   ++++ +++ l++++k++++++ e+++
  KHJ35538.1 1626 DKSICDIEEILDKFSNETDEkifaliiaA----QLKGLTKSHKISQERLSQKIKRFQSKFAEDNK 1686
                  33333333333333333222555533331....22333333333333333333333333333332 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.4   0.0   2.4e-08   6.2e-05       1     121 [.     609     780 ..     609     801 .. 0.72
   2 ?    2.8   0.0     0.053   1.4e+02     113     142 ..     902     929 ..     851     933 .. 0.83

  Alignments for each domain:
  == domain 1  score: 23.4 bits;  conditional E-value: 2.4e-08
      AAA_19   1 qreave.alkekvllvtaGpGtGKTrvlkhivallvelggvkp.eeillvaftgrAakelrerlaalgae......................atTiHrl 75 
                 q +a+  al ++ + + ++pGtGK+ +    +++l+++ +  +  +i++v++t++A ++  e+l ++g++                      a+T  + 
  KHJ35538.1 609 QAKALVcALCQEFVQIQGPPGTGKSFLGLNLMQVLLDIPSKYLiGPIIVVCYTNHALDQFLENLLKFGVHkiirvgaqskveelqeknlkvvAKTNAST 707
                 5667766889999************************987655589******************77777777777777777777777777765555544 PP

      AAA_19  76 al.................................ldfddlltealelle.......eaeeekklqeee.llivDEfqdvdelqyrL 121
                                                    l                      aee  k+ e+  +l+ DE+q v+  q   
  KHJ35538.1 708 -KyeryrlyvandlmekkqnpvtqylnelknirtnL-------------SwnsvktlLAEEYPKIYEQLqHLFADEYQFVQFAQLDP 780
                 .15888888888887777777666665554433333.............13344344223455666776799****99999777655 PP

  == domain 2  score: 2.8 bits;  conditional E-value: 0.053
      AAA_19 113 dvdelqyrLlkallgekkklllvGDpdQli 142
                 +v  l+ ++l all++ ++++ +GD+ Ql 
  KHJ35538.1 902 EV--LEAHFLTALLPSIEHVISIGDHMQLR 929
                 44..6788999***77799*********86 PP

>> DUF2075  Uncharacterized conserved protein (DUF2075)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.4   0.0   0.00011      0.27       4      49 ..     622     671 ..     619     710 .. 0.73
   2 !   11.2   0.2     6e-05      0.15     332     359 ..    1151    1178 ..    1127    1181 .. 0.76
   3 ?   -0.9   0.1       0.3   7.7e+02      75     144 ..    1803    1873 ..    1790    1880 .. 0.73

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00011
     DUF2075   4 vlVtGvaGtGKtvvllnllael....eddeeertavylsvNhplvlvlre 49 
                 v ++G +GtGK+ ++lnl+  l    ++   +   v+ + Nh+l + l++
  KHJ35538.1 622 VQIQGPPGTGKSFLGLNLMQVLldipSKYLIGPIIVVCYTNHALDQFLEN 671
                 669***************99884443333344445555566666555555 PP

  == domain 2  score: 11.2 bits;  conditional E-value: 6e-05
     DUF2075  332 keseekaqkllkNayrVLLtRGrkGlyi 359 
                  ++++++    ++N+++VLL+R+ +Gly+
  KHJ35538.1 1151 NKEKKVGFLKTRNRINVLLSRAKHGLYL 1178
                  455566666789***************8 PP

  == domain 3  score: -0.9 bits;  conditional E-value: 0.3
     DUF2075   75 sefkkaeekkeepkedvvivDEAhrlltksdq..aekqseenqlkelmkrakvvvalvDegQelntgeigte 144 
                  +++++ ++++++++e+ ++ D A +lltk++    + +++  +l   ++ + + ++  D  Qe++++e  t+
  KHJ35538.1 1803 RHYQSFTHSNDSREERQIVNDQAKKLLTKGQElcLQPFQGSSELAIAID-ETLKILGHDWYQEVTKEELETI 1873
                  4446778899999***************887755556666666666666.5677777888888887776555 PP

>> UvrD_C_2  UvrD-like helicase C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.3   0.0   2.9e-07   0.00075       3      52 .]    1128    1179 ..    1126    1179 .. 0.82

  Alignments for each domain:
  == domain 1  score: 19.3 bits;  conditional E-value: 2.9e-07
    UvrD_C_2    3 yaltihkaQGsefpaVivfdpdlaaarmgel....rrrlLYtavTRAreklilv 52  
                   + t+ ++QG e+++Viv      + +++ +    +r+ + + ++RA++ l+l+
  KHJ35538.1 1128 RIATVDNFQGEEAKVVIV--SLVRSNKEKKVgflkTRNRINVLLSRAKHGLYLI 1179
                  688***************..443333435568889*****************96 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00012      0.31       3      61 ..     606     667 ..     604     705 .. 0.71
   2 ?    2.1   0.0     0.053   1.4e+02      84     130 ..     887     930 ..     835     936 .. 0.78

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00012
      AAA_30   3 naeQaaavealltsgdrvavltGpAGtGKttalkalreaweaag.....grviglAptgkaAkv 61 
                 + +Qa+a+  +l ++  ++ ++Gp+GtGK+++   l +++ +       g++i++  t+ a ++
  KHJ35538.1 606 DCSQAKALVCALCQE--FVQIQGPPGTGKSFLGLNLMQVLLDIPskyliGPIIVVCYTNHALDQ 667
                 567999998888888..899**********9866666555544334455666666666666555 PP

  == domain 2  score: 2.1 bits;  conditional E-value: 0.053
      AAA_30  84 arlepgtllivDEagmv.dtkqlaallkaaekagakvilvGDerQlas 130
                  +  ++++l   Eag v  ++ l+all ++e+    vi +GD+ Ql +
  KHJ35538.1 887 LQHVKAKVLFCEEAGEVlEAHFLTALLPSIEH----VISIGDHMQLRP 930
                 45567799999999988688888999999988....*********976 PP

>> RcsD_ABL  RcsD-ABL domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.0   0.0   0.00014      0.35      26      69 ..    1064    1106 ..    1061    1127 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.0 bits;  conditional E-value: 0.00014
    RcsD_ABL   26 lenyGaelltkdernlsqeydilltDdpaklekstlLlsddetg 69  
                  l+ yG++l  k + + ++e++i+l D++++l k++l+++d+e++
  KHJ35538.1 1064 LTPYGGQLQ-KLRSKFQSEFEIILSDQDQELVKNGLFVEDNEHK 1106
                  778888865.5677899*********************998754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1939 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1285  (0.0716716); expected 358.6 (0.02)
Passed bias filter:                      524  (0.0292264); expected 358.6 (0.02)
Passed Vit filter:                        60  (0.00334653); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               7  [number of targets reported over threshold]
# CPU time: 1.11u 0.31s 00:00:01.42 Elapsed: 00:00:00.46
# Mc/sec: 12606.22
//
Query:       KHJ35539.1  [L=745]
Description: putative zn 2cys6 transcription factor protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
      0.031   14.3   0.2      0.031   14.3   0.2    2.3  2  zf-BED    BED zinc finger
      0.039   14.1   9.0       0.12   12.5   9.0    1.9  1  Zn_clus   Fungal Zn(2)-Cys(6) binuclear cluster domain
       0.74   10.2   6.9         23    5.5   4.0    2.9  2  UPF0506   UPF0506


Domain annotation for each model (and alignments):
>> zf-BED  BED zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.3   0.2   5.2e-06     0.031      15      44 .]      26      54 ..      12      54 .. 0.91
   2 ?   -2.6   0.2      0.97   5.8e+03      18      27 ..     381     390 ..     375     395 .. 0.77

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 5.2e-06
                S--EETTTTEE----SSTHHHHHHHHHS-H CS
      zf-BED 15 qkavCryCgkilsrgggttnLkrHLrrkHp 44
                   +C+ Cg+++  g  +  L +HL++++p
  KHJ35539.1 26 YQHTCKACGEKFPKG-RIDSLTTHLVKRCP 54
                5669**********9.*************8 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.97
                 EETTTTEE-- CS
      zf-BED  18 vCryCgkils 27 
                  C+ C+++ s
  KHJ35539.1 381 PCNTCKNVES 390
                 59***99755 PP

>> Zn_clus  Fungal Zn(2)-Cys(6) binuclear cluster domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.5   9.0   2.1e-05      0.12       2      27 ..     365     389 ..     364     402 .. 0.90

  Alignments for each domain:
  == domain 1  score: 12.5 bits;  conditional E-value: 2.1e-05
                 S-HHHHHCT---STSSSS-HHHHHCT CS
     Zn_clus   2 aCdnCrkkKvKCdakkPaCsnCkkln 27 
                 aC++Cr  K  C++++P C  Ck ++
  KHJ35539.1 365 ACIRCRMLKKPCSEDTP-CNTCKNVE 389
                 9****************.****9865 PP

>> UPF0506  UPF0506
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    5.5   4.0    0.0039        23      28      49 ..     362     383 ..     357     390 .. 0.85
   2 ?    4.2   0.0    0.0097        58       5      34 ..     572     601 ..     570     609 .. 0.90

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0039
     UPF0506  28 feGtCveCleseefClrdseCC 49 
                 ++G C +C   ++ C +d+ C 
  KHJ35539.1 362 KKGACIRCRMLKKPCSEDTPCN 383
                 68*****************993 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.0097
     UPF0506   5 geeCsktvfkrCCgdlvCklkspfeGtCve 34 
                 +++Cs+ v+   C++l+   ++ ++G C+ 
  KHJ35539.1 572 DQSCSNGVYGLICSQLSAAAETKASGLCKI 601
                 799*************************86 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (745 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       649  (0.0361983); expected 358.6 (0.02)
Passed bias filter:                      396  (0.0220871); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.59u 0.27s 00:00:00.86 Elapsed: 00:00:00.43
# Mc/sec: 5173.56
//
Query:       KHJ35540.1  [L=602]
Description: hypothetical protein EV44_g1549 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (602 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       646  (0.036031); expected 358.6 (0.02)
Passed bias filter:                      294  (0.016398); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.57u 0.27s 00:00:00.84 Elapsed: 00:00:00.44
# Mc/sec: 4132.51
//
Query:       KHJ35541.1  [L=505]
Description: putative nad-dependent methanol dehydrogenase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   1.7e-100  336.4   0.0   2.1e-100  336.1   0.0    1.1  1  Fe-ADH    Iron-containing alcohol dehydrogenase
    1.6e-15   57.5   0.0    5.4e-12   45.9   0.0    2.4  2  Fe-ADH_2  Iron-containing alcohol dehydrogenase


Domain annotation for each model (and alignments):
>> Fe-ADH  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  336.1   0.0  2.4e-104  2.1e-100       3     356 ..      88     484 ..      86     489 .. 0.94

  Alignments for each domain:
  == domain 1  score: 336.1 bits;  conditional E-value: 2.4e-104
                 EEEEETTGGGGHHHHHTTT-..EEEEEEEHHHH.HH.THHHHHHHHHCTT-EEEE.EEE-S---HHHHHHHHTTS-TT.--EEEEEESHHHHHHHHHHH CS
      Fe-ADH   3 rivfgkgaleelgellkklgakralivtdkgslkksglldkvlesleeagievtvfdgvepnptleeveeaaalareegadvviavGGGsviDtAKaia 101
                  i+fg+g+++e+g ++k++g+++++++td+ + kk++++++v+e l++++ie+tvfd+ + +p++++++ea+++a+e + d+++avGGGsviDtAK+++
  KHJ35541.1  88 AIRFGPGVTKEIGMDFKNMGVRKVCVITDSTV-KKLDAMKQVVEGLNREEIEFTVFDKCRVEPKDSSIKEAIRFAKECQQDAFLAVGGGSVIDTAKLMN 185
                 79*****************************5.6***************************************************************** PP

                 HHTT........................--EEEEESS-S-S-TT-SEEEEE.-TTSEEEEE-..SS--SEEEEEHHHHHHS-HHHHHHHHHHHHHHHHH CS
      Fe-ADH 102 lllanpe..vedyl....gegkakkkkalpliaiPTtaGtGsevtplavitdeeegeklsifdpellPdlaivDpeltltlPkrvtaatglDalahalE 194
                 l++ +pe  + d++    g g + +k+  plia+PTtaGtGse+t++a+++ e + +k++i++++l P+l i+Dp  t t+P++v a++glD+l+h lE
  KHJ35541.1 186 LYTCYPEadFLDFVnaplGRGLPITKNLKPLIAVPTTAGTGSETTGTAIFDLETKRVKTGIAHRNLKPTLGICDPINTRTMPSAVHASSGLDVLCHSLE 284
                 *****95599999999889999999999***********************88889******************************************* PP

                 HHHH.H..................T---TTSSB--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---HHHHHHHHHHC.........C CS
      Fe-ADH 195 ayvs.k..................kanplsdalaleairliaknleravadgedleareqmllastlaglafsnaglgavHalahalgal........f 266
                 + ++ +                  ++np+sd ++l a++  +k+l+rav+d+ed+ea +qmlla+tlag++f+nag++++H+++++++++        +
  KHJ35541.1 285 SWTAiPyferiprpnnpinrpayqGSNPISDIFSLNALKNTIKYLPRAVKDPEDYEAQSQMLLAATLAGVGFGNAGVHLCHGMSYPISGQnpgykhpgY 383
                 ****66***********************************************************************************9777666662 PP

                 G.....GGGGS-HHHHHHHHH..........HHHHHHT...........T--HHHHHHHHHHHHHTT.---SHHHHT-TT-HHHHHHHHHT-T.SGGGG CS
      Fe-ADH 267 g.....iphglanaillpavlrfnaeaaperlaqlaralgge....sdeeaaeeliealrellkelg.lptsLselgvdeedldklaeaalkd.rslan 354
                 +     iphg+++a++ pav+rf+ +++per+ q a+ +g +    + e+a e l+ea+  +l+ lg  p +L+ lg++ e++ +l++ +l + r l+ 
  KHJ35541.1 384 DvncdiIPHGVSVAVTAPAVFRFTGSSNPERHLQAAECFGVDisnaKRESAGEILAEAIAVFLQVLGdQPEGLRGLGFETEHINDLVDGTLPQqRVLHL 482
                 26666799*******************************999***88888888889999999999873577**********************898888 PP

                 SS CS
      Fe-ADH 355 np 356
                  p
  KHJ35541.1 483 AP 484
                 77 PP

>> Fe-ADH_2  Iron-containing alcohol dehydrogenase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.9   0.0     6e-16   5.4e-12       2      94 ..      91     184 ..      90     191 .. 0.96
   2 !    9.4   0.0   8.7e-05      0.78     172     234 ..     308     370 ..     210     397 .. 0.67

  Alignments for each domain:
  == domain 1  score: 45.9 bits;  conditional E-value: 6e-16
    Fe-ADH_2   2 igegaleklgellkelelkkvllvadentkka.agekveeslkeagikvevveeveeeadleeveklvealreketdlvvavGgGtiiDiakyv 94 
                 +g+g+ +++g  +k+++++kv +++d+++kk+ a ++v e l++++i+ +v+++ + e++ +++++ ++ ++e + d+++avGgG++iD+ak++
  KHJ35541.1  91 FGPGVTKEIGMDFKNMGVRKVCVITDSTVKKLdAMKQVVEGLNREEIEFTVFDKCRVEPKDSSIKEAIRFAKECQQDAFLAVGGGSVIDTAKLM 184
                 789****************************99***********************************************************97 PP

  == domain 2  score: 9.4 bits;  conditional E-value: 8.7e-05
    Fe-ADH_2 172 klanevseplaklsaamvqeaaeklvedkketealeellealalsgigisrpaSGsEHliSHa 234
                 + +n +s+ +++++ +++ + + ++v+d+++ ea +++l a +l+g+g+ +++   +H +S  
  KHJ35541.1 308 QGSNPISDIFSLNALKNTIKYLPRAVKDPEDYEAQSQMLLAATLAGVGFGNAGVHLCHGMSYP 370
                 455688999****************************************88887777777754 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (505 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       455  (0.0253779); expected 358.6 (0.02)
Passed bias filter:                      446  (0.0248759); expected 358.6 (0.02)
Passed Vit filter:                        28  (0.00156172); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.53u 0.24s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3741.23
//
Query:       KHJ35542.1  [L=187]
Description: putative succinate dehydrogenase cytochrome b560 subunit [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.9e-22   79.6   4.6    2.6e-22   79.1   4.6    1.2  1  Sdh_cyt   Succinate dehydrogenase/Fumarate reductase transmem


Domain annotation for each model (and alignments):
>> Sdh_cyt  Succinate dehydrogenase/Fumarate reductase transmembrane subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.1   4.6   1.4e-26   2.6e-22       1     120 [.      60     182 ..      60     183 .. 0.94

  Alignments for each domain:
  == domain 1  score: 79.1 bits;  conditional E-value: 1.4e-26
     Sdh_cyt   1 krknrplsphlqlyrlplgawlsilhritGvallvglllllvwlllalslsspesfarvvallas...piklilllllllallyHllnGiRhllwDlgl 96 
                 +rk+rp+sphl++yr++++++ls l ritG+++ +g++ +  ++l++++l+ +   a +++ ++      kl + +l++l++ +H +nG+Rhl+wD+g+
  KHJ35542.1  60 QRKKRPTSPHLTIYRPQITWYLSALNRITGCLISGGFYTFGAAYLVSSLLGWHMNSAFLATAFGAlplALKLGIKTLVALPFTFHSINGVRHLVWDMGK 158
                 589********************************999999999***************9999888887777777************************ PP

     Sdh_cyt  97 glelesarksalavlalavalvlv 120
                 +++++++ +++++v++l++ + l+
  KHJ35542.1 159 AFTNKAVIRTGWMVVGLSISSALA 182
                 *****************9988776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (187 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       454  (0.0253221); expected 358.6 (0.02)
Passed bias filter:                      328  (0.0182944); expected 358.6 (0.02)
Passed Vit filter:                        23  (0.00128284); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.40u 0.26s 00:00:00.66 Elapsed: 00:00:00.41
# Mc/sec: 1373.36
//
Query:       KHJ35543.1  [L=244]
Description: putative phosphopantothenoylcysteine decarboxylase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.1e-46  157.0   0.0    3.6e-45  153.5   0.0    1.9  1  Flavoprotein  Flavoprotein


Domain annotation for each model (and alignments):
>> Flavoprotein  Flavoprotein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.5   0.0     2e-49   3.6e-45       1     156 [.      24     240 ..      24     242 .. 0.89

  Alignments for each domain:
  == domain 1  score: 153.5 bits;  conditional E-value: 2e-49
                   EEEEEEE-SSCGGGCHHHHHHHHHH.TTEEEEEEESCHHHHCCHHGGS..............................TCSSHHHHHHCTTESEEEE CS
  Flavoprotein   1 kkillgiTGsvaaikalellekLkk.egievqvvltkaAkkfiskeklklaa..........................redpilhielrrwadllvi 70 
                   k++ll+++Gsva+ik++e+l++L k ++ ++++v+tkaA +f++  +++++                           +++ ilhielrrwad+++i
    KHJ35543.1  24 KHLLLCASGSVATIKIPEILQSLSKhSNLSIRLVFTKAALHFLN--YSSNEGfhlgifesipnvdgifldndewnqpwNQGGILHIELRRWADIMLI 118
                   79***********************78*****************..6677669999***************************************** PP

                   EEEEHHHHHHHHTT--SSHHHHHHHT..........HCCTTEEEEE.--HHCCTCSTCHHHHHHH.HT............................. CS
  Flavoprotein  71 aPasantlakianGiadnlltlilra..........takkpiliaPamnpamyenpqtlknlekl.eeg......vtvikPse.............. 136
                   aP+santlaki++G+adnllt+++ra          +++k i++aPamn+am+++p+t+ +l+ l +++                            
    KHJ35543.1 119 APLSANTLAKIVAGMADNLLTSVVRAwdtegliqnsGERKRIIVAPAMNTAMWNHPITKVQLKVLgHDWaiseknD------Idmdinkgtchgwfe 209
                   ************************999999999999899**************************66664444440......245555555566666 PP

                   ..................GHHHHHHHHHHCH CS
  Flavoprotein 137 ...........gdigkgkmaeieeivgkild 156
                              gdig+g+m e+ +iv+ + +
    KHJ35543.1 210 llmpvekklacGDIGIGAMCEWRDIVKIVEK 240
                   6666669******************997766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (244 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       368  (0.0205254); expected 358.6 (0.02)
Passed bias filter:                      344  (0.0191868); expected 358.6 (0.02)
Passed Vit filter:                        19  (0.00105974); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.44u 0.24s 00:00:00.68 Elapsed: 00:00:00.40
# Mc/sec: 1845.91
//
Query:       KHJ35544.1  [L=794]
Description: putative ubiquitin c-terminal hydrolase family protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      6e-12   45.8   0.0      5e-08   32.9   0.1    2.7  3  UCH_1     Ubiquitin carboxyl-terminal hydrolase


Domain annotation for each model (and alignments):
>> UCH_1  Ubiquitin carboxyl-terminal hydrolase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    9.5   0.0   3.6e-05      0.65       5      73 ..     118     283 ..     115     438 .. 0.73
   2 !   32.9   0.1   2.8e-12     5e-08     259     319 ..     452     527 ..     422     527 .. 0.78
   3 ?   -2.0   0.3      0.11     2e+03     169     206 ..     685     723 ..     589     789 .. 0.59

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 3.6e-05
                 xx.xxxxxxxxxx.......................................................................xxxxxx......xxx RF
       UCH_1   5 nh.ivnsYlNslL.......................................................................Qvlyfi......ppl 25 
                 n+ +v++Y++s+L                                                                       + + fi      p+l
  KHJ35544.1 118 NRtNVTCYVDSVLfamfagfqsydqiffgafendsqrilsrilllyanmlragmlihtdltknlqdalaacgwqnspneqqdasEFYGFIaqilniPLL 216
                 66699*******************************************************************************666666666666999 PP

                 x.xxxxxxxxx.xxxxxxxxxxxxxxxx...xxxxxxx..xxxxxxxxxxxxxx............x RF
       UCH_1  26 r.nlalshlak.eckkehcLlcElgflf...dmldkak..glncqasnFlrals............s 73 
                 + +  ++h a+ +  ++ +++ E  +++   d  d +    ++c++ +++++++            s
  KHJ35544.1 217 SmKSKIFHHATpDERHDYRIVEEQVLNVsipDTDDCQPvpLEKCLEGYLNNKVEitrsvpriypfsS 283
                 9999999999978889999999999999776555555464569999999999995554444444441 PP

  == domain 2  score: 32.9 bits;  conditional E-value: 2.8e-12
                 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxx...xxxxxxxxx RF
       UCH_1 259 keerekakaekeikvYeLqsvvvhigdskesghLvslvkvaekeler...............dppes...qWylFNDfl 319
                 ++e++++ +++++++ +L +vv+h+g+s ++gh+++lv+ a + ++                +       qW +F+D++
  KHJ35544.1 452 DDESAEEYDQTQSFKLVLKAVVCHRGKSLNEGHYITLVRRAASISNGdsnssqklsdasqppH---YskdQWCKFDDLS 527
                 455556788999***************************776655547778888888865444...1556*******85 PP

  == domain 3  score: -2.0 bits;  conditional E-value: 0.11
                 xxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx RF
       UCH_1 169 snekkeakvtf.asilksslerekttrawCekCkryqpt 206
                 ++++++ ++++ a+il+ +l r +++    e Ck+ q++
  KHJ35544.1 685 RSSSQSGESRItATILRLNLMRSREQLRKPEVCKERQNN 723
                 222333333333666666666655554444555443332 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (794 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       644  (0.0359195); expected 358.6 (0.02)
Passed bias filter:                      382  (0.0213063); expected 358.6 (0.02)
Passed Vit filter:                        21  (0.00117129); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.60u 0.30s 00:00:00.89 Elapsed: 00:00:00.45
# Mc/sec: 5307.03
//
Query:       KHJ35545.1  [L=163]
Description: putative virulence effector [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
       0.26   11.3   1.9       0.45   10.5   1.9    1.4  1  HypA      Hydrogenase/urease nickel incorporation, metallocha
       0.47   10.2   4.7        3.4    7.4   0.2    2.3  2  zf-RRN7   Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn


Domain annotation for each model (and alignments):
>> HypA  Hydrogenase/urease nickel incorporation, metallochaperone, hypA
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.5   1.9   5.1e-05      0.45      65      98 ..      25      60 ..      10      65 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.5 bits;  conditional E-value: 5.1e-05
                EEE--EEEETTTS-EEECHH.H.HHS-TTTSSS-EE CS
        HypA 65 eevpvkvrCreCgkefelee.k.alrCpkCgsadve 98
                ++++  + C++C+ +  +++ + a +C++Cgs++++
  KHJ35545.1 25 KKQQTLYFCKRCNGHHPTKNcSrAPSCGNCGSTNLT 60
                66778899*****9999887645889******9875 PP

>> zf-RRN7  Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.3   0.9    0.0037        33      21      27 ..      30      36 ..      30      37 .. 0.89
   2 ?    7.4   0.2   0.00038       3.4       4      17 ..      48      61 ..      46      62 .. 0.82

  Alignments for each domain:
  == domain 1  score: 4.3 bits;  conditional E-value: 0.0037
     zf-RRN7 21 fyyCrrC 27
                +y+C+rC
  KHJ35545.1 30 LYFCKRC 36
                6****** PP

  == domain 2  score: 7.4 bits;  conditional E-value: 0.00038
     zf-RRN7  4 gppCgvCgcrsftl 17
                 p Cg Cg+++ t+
  KHJ35545.1 48 APSCGNCGSTNLTE 61
                688******98776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (163 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       859  (0.0479112); expected 358.6 (0.02)
Passed bias filter:                      439  (0.0244855); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.42u 0.24s 00:00:00.65 Elapsed: 00:00:00.40
# Mc/sec: 1218.13
//
Query:       KHJ35546.1  [L=486]
Description: putative ring finger domain protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model        Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.3e-10   40.1   6.8    6.9e-10   39.1   6.8    1.6  1  zf-RING_2     Ring finger domain
      4e-08   32.9   3.1    5.2e-08   32.5   1.9    1.9  2  zf-RING_11    RING-like zinc finger
    0.00024   20.9   6.9    0.00024   20.9   6.9    2.0  2  zf-C3HC4_2    Zinc finger, C3HC4 type (RING finger)
    0.00025   21.2   8.1    0.00096   19.4   8.1    2.0  1  zf-rbx1       RING-H2 zinc finger domain
    0.00034   20.4   6.2    0.00034   20.4   6.2    2.1  3  zf-C3HC4      Zinc finger, C3HC4 type (RING finger)
  ------ inclusion threshold ------
      0.017   14.9   7.0      0.034   14.0   7.0    1.5  1  Prok-RING_4   Prokaryotic RING finger family 4
      0.029   14.4   1.1      0.063   13.3   1.1    1.6  1  zf-ANAPC11    Anaphase-promoting complex subunit 11 RING-H2 f
      0.034   14.1   4.8      0.063   13.3   4.8    1.5  1  zf-RING_5     zinc-RING finger domain
       0.14   12.1   3.9       0.27   11.2   3.9    1.5  1  zf-C3HC4_3    Zinc finger, C3HC4 type (RING finger)
       0.89    9.6   5.5       0.85    9.7   3.5    2.1  2  zf-RING_UBOX  RING-type zinc-finger
          4    7.7   6.1         66    3.8   6.1    2.7  1  FANCL_C       FANCL C-terminal domain


Domain annotation for each model (and alignments):
>> zf-RING_2  Ring finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.1   6.8   4.3e-13   6.9e-10       3      44 .]     328     370 ..     326     370 .. 0.96

  Alignments for each domain:
  == domain 1  score: 39.1 bits;  conditional E-value: 4.3e-13
   zf-RING_2   3 CpICleelssadsvlllpCgHvfhreClerw.lrssstCPlCr 44 
                 C+IC+e++  ++ +++lpC+H +h  C++ w l  + tCPlCr
  KHJ35546.1 328 CSICTEDFIAGEYLRVLPCNHKYHPVCIDPWlLDVCGTCPLCR 370
                 *******************************8888999****9 PP

>> zf-RING_11  RING-like zinc finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.0         4   6.5e+03      14      22 ..     121     134 ..     117     135 .. 0.59
   2 !   32.5   1.9   3.2e-11   5.2e-08       2      29 .]     328     355 ..     327     355 .. 0.99

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4
  zf-RING_11  14 alfilp.....CsH 22 
                 a+++ +     C+H
  KHJ35546.1 121 AIVLFSynsdaCNH 134
                 55555444555999 PP

  == domain 2  score: 32.5 bits;  conditional E-value: 3.2e-11
  zf-RING_11   2 CsICLeefkpgqalfilpCsHtFHfkCI 29 
                 CsIC e+f  g+ l++lpC+H +H  CI
  KHJ35546.1 328 CSICTEDFIAGEYLRVLPCNHKYHPVCI 355
                 ***************************9 PP

>> zf-C3HC4_2  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.0       2.5   4.1e+03      25      35 ..     279     289 ..     278     290 .. 0.83
   2 !   20.9   6.9   1.5e-07   0.00024       2      40 .]     328     369 ..     327     369 .. 0.89

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 2.5
  zf-C3HC4_2  25 kCilrsLeekn 35 
                 kCi  sL++++
  KHJ35546.1 279 KCIENSLNASS 289
                 8****999875 PP

  == domain 2  score: 20.9 bits;  conditional E-value: 1.5e-07
  zf-C3HC4_2   2 CpiCldmlkdpsvvt..pCgHvfCqkCilrsLeekn.eCPlC 40 
                 C iC + +  + ++   pC+H+++  Ci+++L +    CPlC
  KHJ35546.1 328 CSICTEDFIAGEYLRvlPCNHKYHPVCIDPWLLDVCgTCPLC 369
                 *****999988877677*************9888777***** PP

>> zf-rbx1  RING-H2 zinc finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.4   8.1   5.9e-07   0.00096      31      55 .]     345     370 ..     322     370 .. 0.86

  Alignments for each domain:
  == domain 1  score: 19.4 bits;  conditional E-value: 5.9e-07
     zf-rbx1  31 eCgHaFHlhCiskWlkt.rkvCPlcr 55 
                  C+H++H  Ci+ Wl     +CPlcr
  KHJ35546.1 345 PCNHKYHPVCIDPWLLDvCGTCPLCR 370
                 7*************99889******8 PP

>> zf-C3HC4  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.6   0.0       3.2   5.3e+03      13      20 ..     128     135 ..     114     135 .. 0.74
   2 ?   -2.8   0.1       3.8   6.2e+03      24      31 ..     279     286 ..     278     290 .. 0.78
   3 !   20.4   6.2   2.1e-07   0.00034       1      41 []     328     369 ..     328     369 .. 0.94

  Alignments for each domain:
  == domain 1  score: -2.6 bits;  conditional E-value: 3.2
                 .E-TTS-- CS
    zf-C3HC4  13 elleCkHs 20 
                  ++ C+Hs
  KHJ35546.1 128 NSDACNHS 135
                 47899996 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 3.8
                 HHHHHHHH CS
    zf-C3HC4  24 kCirkilk 31 
                 kCi++ l+
  KHJ35546.1 279 KCIENSLN 286
                 79999988 PP

  == domain 3  score: 20.4 bits;  conditional E-value: 2.1e-07
                 -TTT-S--SS-E...E-TTS--B-CHHHHHHHHCTSSB--TTT CS
    zf-C3HC4   1 CpiCleeakepn..elleCkHsfCskCirkilksrkkvkCPlC 41 
                 C+iC+e +      ++l+C+H+++  Ci+ +l  +   +CPlC
  KHJ35546.1 328 CSICTEDFIAGEylRVLPCNHKYHPVCIDPWLL-DVCGTCPLC 369
                 ********998889*******************.77778**** PP

>> Prok-RING_4  Prokaryotic RING finger family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.0   7.0   2.1e-05     0.034       1      41 [.     328     374 ..     328     378 .. 0.88

  Alignments for each domain:
  == domain 1  score: 14.0 bits;  conditional E-value: 2.1e-05
  Prok-RING_4   1 CvlCgeq...ekkailepCgHlvCkeCfdskdls...sCPlCqrris 41 
                  C +C+e    ++  ++ pC+H     C d + l    +CPlC++ + 
   KHJ35546.1 328 CSICTEDfiaGEYLRVLPCNHKYHPVCIDPWLLDvcgTCPLCRHDLR 374
                  99****9999999*********999999999666668******9876 PP

>> zf-ANAPC11  Anaphase-promoting complex subunit 11 RING-H2 finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   1.1   3.8e-05     0.063      51      80 ..     345     372 ..     320     375 .. 0.85

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.8e-05
                 TTS-EEEHHHHHHHHHHHSTSSB-TTTSSB CS
  zf-ANAPC11  51 kckhnfhlhcilkwletetskglcpmcrqt 80 
                  c+h++h  ci  wl    + g cp+cr  
  KHJ35546.1 345 PCNHKYHPVCIDPWLL--DVCGTCPLCRHD 372
                 5*************97..5789******86 PP

>> zf-RING_5  zinc-RING finger domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.3   4.8   3.9e-05     0.063       2      43 ..     328     370 ..     327     371 .. 0.94

  Alignments for each domain:
  == domain 1  score: 13.3 bits;  conditional E-value: 3.9e-05
   zf-RING_5   2 CnkCfeklskeekfyltsCgHifCekClkkll.ekeavCpiCr 43 
                 C++C e +   e   +++C H ++  C++  l   + +Cp+Cr
  KHJ35546.1 328 CSICTEDFIAGEYLRVLPCNHKYHPVCIDPWLlDVCGTCPLCR 370
                 ********88888*****************99999*******9 PP

>> zf-C3HC4_3  Zinc finger, C3HC4 type (RING finger)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   3.9   0.00016      0.27       4      47 ..     327     373 ..     324     376 .. 0.83

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 0.00016
                 B-TTTSSS...BS-EEETTEEEEEE-HHHHHHHHH.TT-B-TTT--B- CS
  zf-C3HC4_3   4 eCviCler...prnvvllpCgHlvlCeeCaekllk.rkkkCpiCrrpi 47 
                  C+iC e     +   +lpC+H  +   C + +l     +Cp+Cr + 
  KHJ35546.1 327 GCSICTEDfiaGEYLRVLPCNHK-YHPVCIDPWLLdVCGTCPLCRHDL 373
                 6******64436778999*****.999***999877*********875 PP

>> zf-RING_UBOX  RING-type zinc-finger
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.7   3.5   0.00052      0.85       1      38 [.     328     366 ..     328     367 .. 0.70
   2 ?   -1.5   0.2       1.6   2.6e+03       1       8 [.     366     373 ..     366     378 .. 0.76

  Alignments for each domain:
  == domain 1  score: 9.7 bits;  conditional E-value: 0.00052
  zf-RING_UBOX   1 CpIClelftdP..lv.lpCGHtFCreCl..welskslegafkC 38 
                   C+IC e+f     l  lpC H ++  C+  w     l+   +C
    KHJ35546.1 328 CSICTEDFIAGeyLRvLPCNHKYHPVCIdpW----LLDVCGTC 366
                   ********722543436***********444....55555555 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 1.6
  zf-RING_UBOX   1 CpIClelf 8  
                   Cp C+ ++
    KHJ35546.1 366 CPLCRHDL 373
                   9***9877 PP

>> FANCL_C  FANCL C-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    3.8   6.1     0.041        66       5      63 ..     328     371 ..     324     377 .. 0.67

  Alignments for each domain:
  == domain 1  score: 3.8 bits;  conditional E-value: 0.041
                 -SSS--SS-TT-----B--S-TT----B-SGGGHHHHHHHHSSS-TTT--EEE-TTT-S CS
     FANCL_C   5 CgiCyayrldsgevpdisCdnekCnkkfHsaCLkeWlrslkesrqsfdvlfGeCPyCkk 63 
                 C+iC   ++  ge   +      Cn+k+H +C+  Wl  +           G+CP C++
  KHJ35546.1 328 CSICTEDFI-AGEYLRV----LPCNHKYHPVCIDPWLLDV----------CGTCPLCRH 371
                 666666666.3333332....35899**********9653..........567777765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (486 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       742  (0.0413855); expected 358.6 (0.02)
Passed bias filter:                      623  (0.0347482); expected 358.6 (0.02)
Passed Vit filter:                        55  (0.00306766); expected 17.9 (0.001)
Passed Fwd filter:                        11  (0.000613531); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.54u 0.25s 00:00:00.79 Elapsed: 00:00:00.39
# Mc/sec: 3694.24
//
Query:       KHJ35547.1  [L=877]
Description: putative root hair defective 3 gtp-binding protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
   1.5e-292  972.3   0.9   1.8e-292  972.0   0.9    1.0  1  RHD3       Root hair defective 3 GTP-binding protein (RHD3)
    1.6e-07   30.9   0.1    2.8e-07   30.1   0.1    1.3  1  GBP        Guanylate-binding protein, N-terminal domain
    1.5e-05   25.1   0.0    3.2e-05   24.1   0.0    1.6  1  Dynamin_N  Dynamin family
    0.00039   20.5   0.0    0.00094   19.2   0.0    1.7  1  MMR_HSR1   50S ribosome-binding GTPase
     0.0031   17.0   0.3          4    6.9   0.0    3.4  3  FeoB_N     Ferrous iron transport protein B
     0.0053   17.0   0.1      0.015   15.6   0.1    1.8  1  AAA_28     AAA domain
  ------ inclusion threshold ------
      0.042   13.1   0.1       0.07   12.4   0.1    1.3  1  Septin     Septin
      0.046   14.1   1.0         20    5.7   0.1    3.2  3  Enkurin    Calmodulin-binding
        0.1   13.0   0.8       0.62   10.4   0.0    2.6  3  AAA_16     AAA ATPase domain


Domain annotation for each model (and alignments):
>> RHD3  Root hair defective 3 GTP-binding protein (RHD3)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  972.0   0.9  9.3e-296  1.8e-292       1     738 [.      80     859 ..      80     863 .. 0.99

  Alignments for each domain:
  == domain 1  score: 972.0 bits;  conditional E-value: 9.3e-296
                 EEBTTSSHHHHHHHHS--------TTS------SEEEEE-S-EE.......--SSEEEEEEEE-BSSSSSSS-CHHHHHHHHHHHHH-SEEEEEEEGGG CS
        RHD3   1 lGsqStGKSTLLNhLFgTnFsvmdaseRqqTTKGiWlakaknvg.......ksepnilvmDvEGtDGrERGEDqdFErksALFalavsevlivNiWehq 92 
                 +GsqStGKSTLLNhLFgT+F vm+++eR+qTTKGiW++ +k++        ++++ ilvmDvEGtDGrERGEDqdFErksALFala+sev+i+NiWehq
  KHJ35547.1  80 FGSQSTGKSTLLNHLFGTQFGVMSETERRQTTKGIWMSINKQEIlkesgsqRMADGILVMDVEGTDGRERGEDQDFERKSALFALATSEVIILNIWEHQ 178
                 8****************************************9888999**9************************************************ PP

                 TTSSTTTTHHHHHHHHHHHHHHHCCSHSS---EEEEEEEESE-SSS-HHHHHHHHHHHHHHHHHHS---GGGTT--HHHHEEEEEEEEE-TTT-HHHHH CS
        RHD3  93 vGlyqgaNmaLLKTVfeVnlrLFlkdkdsdrkvlLlfViRDkvgvTplenLektltedlqkiWdslsKPegleessledfFdvefvaLshkelkeeqFk 191
                 vGlyqgaNm+LLKTVfeVnl+LFlkdk+s+ ++lL+fViRD++g+Tpl+nL++tl+ dl +iW+slsKP+gle+s++ d+Fd++f++L+hk+l++++F 
  KHJ35547.1 179 VGLYQGANMGLLKTVFEVNLQLFLKDKQSTPRSLLFFVIRDHLGTTPLANLRNTLIGDLSNIWASLSKPAGLEKSRIGDYFDFAFATLPHKILQPNEFV 277
                 *************************************************************************************************** PP

                 HHHHHHHHHHTTS...............--S--GGGS-SS-HHHHHHHHHHHHHHHHTTTTT-HHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTS.... CS
        RHD3 192 eevkkLrerfvesk...........eiengvfkpeyhkriPadgfslyaeqiWdqieeNkDLDLPtqqvlvAqfrcdEianevleefiaaiaeleekqr 279
                 +evkkL++rf  +k           ++e gvf peyh+riPadgfs+yae++Wdqi +NkDLDLP+qq+l+AqfrcdEi++evl++f++ i +lee+q+
  KHJ35547.1 278 AEVKKLGDRFRVGKrpinndfesysDTESGVFLPEYHRRIPADGFSVYAEGVWDQIISNKDLDLPSQQELLAQFRCDEISREVLISFDTCILPLEEEQA 376
                 ************************999************************************************************************ PP

                 ..SS--SS--HHHHHHHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HCT.TT......THHHHH CS
        RHD3 280 elkeaaeaglleelgkklaslrekaleeydteAsryekgvyeeKrqeLeekvdsklkalfqavlealrkellekfkeavekalkage......dFaesv 372
                 e++++++  +l++lg+  +++re++++++  eA ry+kgv+ +K+ eLe+k+ds+l++lf  +l a++k +l +f+++v+ a+kag+      +Fa+++
  KHJ35547.1 377 ESAKFGNFRVLKDLGTIGKQAREDSFRAFGVEAGRYHKGVFARKQSELEAKIDSRLRTLFRGQLLAVHKFGLISFSDSVSAAVKAGQnsnasyEFADII 475
                 *************************************************************************************************** PP

                 HHHHHHHHHHHHHHH.HTTSTTTTS--.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--..................TTC CS
        RHD3 373 kekkkklvekfdeeaeslvveqakwdasdkiilklekdieaviaklrkeelkelvervekkleselseavelllekls..................kev 453
                 +++kk ++e+f  ea++l++++++w ++ ++++ ++++++av++klrk e+++l++r+ek+ +s+l+e v l+++kl+                  k++
  KHJ35547.1 476 AKEKKIALENFMTEAKDLIINGVSWTNFSHEYQLYSQELDAVSTKLRKDEIRRLAARLEKWTRSRLNELVSLEFNKLGssrqasgsselnqesaseKDF 574
                 *************************************************************************************************** PP

                 HHHHHHHHTTSSS.........STSS---TTTTCTTHHHHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHTBBSSTBB----SHHHHCCSSHHHHH CS
        RHD3 454 WdrvlkefkseveeavsklkdavsgfelseeevdkalknlkkkswlvlekkikeelseekillrlrdrFedvFryDedgvPrlwkkkedieaiykeare 552
                 Wdr++  f++ v ea  ++++++++f ++++evd +l++lk+ksw++l++k +ee++e++i+++lr++Fed+FryDe gvPr+w++++die++y++a++
  KHJ35547.1 575 WDRIWCIFTESVAEAAVRFTERATSFKADQDEVDYGLWRLKRKSWVILRTKLDEEVMEGNIMTKLRENFEDKFRYDETGVPRIWRPTDDIEGTYTKAKD 673
                 *************************************************************************************************** PP

                 HTTSSHHHHTTTB-TTS-B---SS--SSCHHHTTT--.........-------TTTS-TTBSS-HHHHCCSTTCHHHHHHHHHTTTCCTT-XXXXXXXX CS
        RHD3 553 kaLkllsvlsvirladeseniekveiveledeekseaseesvtsidgldesegeeveeeatiltevkkkellvqFkkeadltvveakrsainnntqiPl 651
                 ++L+l++ ls +rl+ ++ ++   +++++    + + +ee++ +i+glde+eg++++ e+til+e+k+++l+ +Fkk+a +++veakrsai++  +iPl
  KHJ35547.1 674 STLSLIPRLSKFRLSKTQRPPALNDWIGNRYALADHKDEEDLIPIGGLDEEEGKSLDDEMTILSEAKRQDLVSRFKKHASGVYVEAKRSAIGGVSEIPL 772
                 *************************************************************************************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        RHD3 652 yiyvlllvLGwNEfvavlrNPlylllllvlglvvyvlyqlnllgpalkvveaamnellklakeklrefleedeevresqetkksssk 738
                 y++v++l LGwNE+++vlrNP+y++ ll +g+v y +++lnl+gp+l ++eaa+ + ++++k+klrefle++e++r++ ++ k++++
  KHJ35547.1 773 YFWVIVLFLGWNELLTVLRNPIYFVFLLTIGIVLYITWTLNLWGPILSMIEAASAQGIEIGKTKLREFLENNESTRKALNSGKEDES 859
                 ****************************************************************************99988776655 PP

>> GBP  Guanylate-binding protein, N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.1   0.1   1.4e-10   2.8e-07      23     114 ..      76     175 ..      62     221 .. 0.74

  Alignments for each domain:
  == domain 1  score: 30.1 bits;  conditional E-value: 1.4e-10
                 EEEEEEBTTSSHHHHHHHHHTBSSSSESSSCSSST-SSEEEESCE.......-SSSTCEEEEEEEEECBTTTTTSSHHH...HHHHHHHHHHH-SEEEE CS
         GBP  23 vvaivGlyRkGksfLlnklarkkkGFslrstvesetkGiliWcep.......hpkkekvalvLlDteGlgDveksdvkd...datiFaLavllssvfvY 111
                  +++ G   +Gks Lln+l + + G    +  ++ tkGi++  +          ++    ++++D eG+   e+++++d   ++ +FaLa+  s v + 
  KHJ35547.1  76 LISVFGSQSTGKSTLLNHLFGTQFGVMSETERRQTTKGIWMSINKqeilkesGSQRMADGILVMDVEGTDGRERGEDQDferKSALFALAT--SEVIIL 172
                 689*************************9999*********887777786443444455699*******9999988776333688999986..777777 PP

                 EEE CS
         GBP 112 nss 114
                 n  
  KHJ35547.1 173 NIW 175
                 764 PP

>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.1   0.0   1.6e-08   3.2e-05       1      28 [.      77     104 ..      77     152 .. 0.89

  Alignments for each domain:
  == domain 1  score: 24.1 bits;  conditional E-value: 1.6e-08
                 EEEEEBTTTTHHHHHHHHHTS--S---S CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgp 28 
                 i v+GsqS GKS++ln+L g ++ ++++
  KHJ35547.1  77 ISVFGSQSTGKSTLLNHLFGTQFGVMSE 104
                 78********************988776 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   19.2   0.0   4.7e-07   0.00094       2      80 ..      77     171 ..      76     202 .. 0.63

  Alignments for each domain:
  == domain 1  score: 19.2 bits;  conditional E-value: 4.7e-07
                 EEEEESTTSSHHHHHHHHHTS...TEEESSSTTSSSSEEEEEEEETTEE.............EEEEECGGCSS....HHHHHHHHHHHHHHHHCTSEEE CS
    MMR_HSR1   2 vaivGrpNvGKStLinaltge...kaivsdkpgtTrdinegrvklkgke.............ielvDtpGlie....gaseekglgkaflaleeadlil 80 
                 + ++G   +GKStL+n l+g+   +   +++ +tT+ i    ++  ++e             i ++D+ G  +    g++++ + + a+ al  +++i+
  KHJ35547.1  77 ISVFGSQSTGKSTLLNHLFGTqfgVMSETERRQTTKGIWMS-IN--KQEilkesgsqrmadgILVMDVEG-TDgrerGEDQDFERKSALFALATSEVII 171
                 6899****************844333445555677666444.43..111223334445556699999999.6422222222223444444444455555 PP

>> FeoB_N  Ferrous iron transport protein B
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.9   0.0     0.002         4       3      25 ..      77      99 ..      75     103 .. 0.87
   2 ?    3.6   0.0     0.022        43      63     103 ..     475     515 ..     468     522 .. 0.87
   3 ?    2.2   0.0      0.06   1.2e+02     112     135 ..     819     842 ..     814     855 .. 0.91

  Alignments for each domain:
  == domain 1  score: 6.9 bits;  conditional E-value: 0.002
                EEEEESTTSSHHHHHHHHHTTSE CS
      FeoB_N  3 valvGnpnvGkttlfnaltgakq 25
                + + G + +Gk+tl+n+l g++ 
  KHJ35547.1 77 ISVFGSQSTGKSTLLNHLFGTQF 99
                6789**************99875 PP

  == domain 2  score: 3.6 bits;  conditional E-value: 0.022
                 SSHHHHHHHHHHHCTSSSEEEEEEEGGGHHHHHHHHHHHHH CS
      FeoB_N  63 yseeekvardflleeepdvvvnvvdatnlernLyLtlqlle 103
                 +++e+k+a + +++e  d+++n v  tn+  + +L  q l+
  KHJ35547.1 475 IAKEKKIALENFMTEAKDLIINGVSWTNFSHEYQLYSQELD 515
                 5789*************************999999988766 PP

  == domain 3  score: 2.2 bits;  conditional E-value: 0.06
                 EETHHHHHHTTEEE-HHHHHHHHT CS
      FeoB_N 112 lnmideaekkgieidlkkLsekLg 135
                 l mi++a+++giei ++kL+e L+
  KHJ35547.1 819 LSMIEAASAQGIEIGKTKLREFLE 842
                 89******************9987 PP

>> AAA_28  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   15.6   0.1   7.4e-06     0.015       2      37 ..      77     112 ..      76     151 .. 0.82

  Alignments for each domain:
  == domain 1  score: 15.6 bits;  conditional E-value: 7.4e-06
      AAA_28   2 ivitGgestGKTtlleaLaargypvvpEaareilee 37 
                 i ++G +stGK+tll++L  +++ v+ E+ r+ +++
  KHJ35547.1  77 ISVFGSQSTGKSTLLNHLFGTQFGVMSETERRQTTK 112
                 6789****************9999999998887665 PP

>> Septin  Septin
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.4   0.1   3.5e-05      0.07       2      60 ..      71     130 ..      70     146 .. 0.74

  Alignments for each domain:
  == domain 1  score: 12.4 bits;  conditional E-value: 3.5e-05
                 EEEEEEE.EEEBTTSSCCCCCCTTSSSS------------------S-EEEEEEEEETTC CS
      Septin   2 gieftlm.vvGesglGkttlintlfetdlieeekleeasekkkktveikkkkvvieedgv 60 
                 g+++ l+ v G++++Gk+tl+n lf t+    +++e+++ +k   ++i+k++ + e   +
  KHJ35547.1  71 GFNYHLIsVFGSQSTGKSTLLNHLFGTQFGVMSETERRQTTKGIWMSINKQEILKESGSQ 130
                 6666666378******************99988788777777777777776655554444 PP

>> Enkurin  Calmodulin-binding
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.2   0.0       1.4   2.7e+03      35      50 ..      99     114 ..      86     129 .. 0.79
   2 ?    5.7   0.1    0.0099        20      53      89 ..     499     535 ..     476     538 .. 0.90
   3 ?    4.9   0.0     0.017        34      27      58 ..     725     756 ..     704     764 .. 0.80

  Alignments for each domain:
  == domain 1  score: -1.2 bits;  conditional E-value: 1.4
     Enkurin  35 mrllseeerqellegL 50 
                 + ++se er+++ +g 
  KHJ35547.1  99 FGVMSETERRQTTKGI 114
                 5689*******99975 PP

  == domain 2  score: 5.7 bits;  conditional E-value: 0.0099
     Enkurin  53 kweelnkeyqslpllidtlskrqrKeklEkeLkqlEk 89 
                 +w++  +eyq ++  +d +s + rK ++ +  + lEk
  KHJ35547.1 499 SWTNFSHEYQLYSQELDAVSTKLRKDEIRRLAARLEK 535
                 799***********************99776666665 PP

  == domain 3  score: 4.9 bits;  conditional E-value: 0.017
     Enkurin  27 ekkeappgmrllseeerqellegLkkkweeln 58 
                 e k+  ++m++lse++rq+l++  kk+ + ++
  KHJ35547.1 725 EGKSLDDEMTILSEAKRQDLVSRFKKHASGVY 756
                 33444599******************987665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.4   0.0   0.00031      0.62      16      46 ..      62      96 ..      56     168 .. 0.70
   2 ?   -2.8   0.0       3.5     7e+03      76      76 ..     381     381 ..     312     443 .. 0.46
   3 ?   -0.8   0.1      0.89   1.8e+03       5      25 ..     522     543 ..     510     559 .. 0.87

  Alignments for each domain:
  == domain 1  score: 10.4 bits;  conditional E-value: 0.00031
      AAA_16 16 le...rvrsgrp.elvllsGesGvGKsslvrellr 46
                l+   +++sg   +l+ + G + +GKs+l+++l+ 
  KHJ35547.1 62 LQltnTAHSGFNyHLISVFGSQSTGKSTLLNHLFG 96
                444214444444899*****************993 PP

  == domain 2  score: -2.8 bits;  conditional E-value: 3.5
      AAA_16  76 l 76 
                 +
  KHJ35547.1 381 F 381
                 1 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.89
      AAA_16   5 ReeeleqLlsalervrsgrp.e 25 
                 R++e+++L++ le++ ++r  e
  KHJ35547.1 522 RKDEIRRLAARLEKWTRSRLnE 543
                 8999999999999998888644 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (877 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       558  (0.0311228); expected 358.6 (0.02)
Passed bias filter:                      408  (0.0227564); expected 358.6 (0.02)
Passed Vit filter:                        38  (0.00211947); expected 17.9 (0.001)
Passed Fwd filter:                         9  (0.00050198); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               9  [number of targets reported over threshold]
# CPU time: 0.67u 0.32s 00:00:00.99 Elapsed: 00:00:00.44
# Mc/sec: 5960.74
//
Query:       KHJ35548.1  [L=537]
Description: hypothetical protein EV44_g2255 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.7e-20   71.9   3.4    3.7e-20   71.9   3.4    2.3  2  Clr5         Clr5 domain
  ------ inclusion threshold ------
       0.03   13.9   0.1      0.078   12.6   0.1    1.7  1  Herpes_IE68  Herpesvirus immediate early protein


Domain annotation for each model (and alignments):
>> Clr5  Clr5 domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.9   3.4   4.1e-24   3.7e-20       2      53 ..       2      53 ..       1      54 [. 0.97
   2 ?   -2.5   0.1      0.72   6.5e+03       3      11 ..     263     271 ..     262     274 .. 0.77

  Alignments for each domain:
  == domain 1  score: 71.9 bits;  conditional E-value: 4.1e-24
        Clr5  2 eedWeahkatIrrLYleenrsLkdvmeiMeeehgFkatkrqyktrfkkWgfr 53
                 +dW ++ + ++r+Y+ee+rsL+d+me+M+e+h+F+++kr+++t+fkkW+f+
  KHJ35548.1  2 VYDWGNKEEMCYRMYIEEKRSLEDIMEYMKENHKFNPSKRAFQTQFKKWDFP 53
                59************************************************97 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.72
        Clr5   3 edWeahkat 11 
                 e+Wea+k  
  KHJ35548.1 263 ERWEAAKHR 271
                 89**99975 PP

>> Herpes_IE68  Herpesvirus immediate early protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.6   0.1   8.7e-06     0.078      24     103 ..     261     341 ..     245     359 .. 0.87

  Alignments for each domain:
  == domain 1  score: 12.6 bits;  conditional E-value: 8.7e-06
  Herpes_IE68  24 ctlgWkldlarlvedinklFrcilraalnstgsanrLRrlvlDiy.lmGrtraRlkqatWerllqlsptqslhLRntlrev 103
                   +  W+   +rl++d  +l   +   ++n   ++ +L  ++ D+   m     R++ a+ ++ l ++p qs +LR +   v
   KHJ35548.1 261 GPERWEAAKHRLIQDSQHLQSVFWLNNENQDAKKLALDVVCSDVTkRMRTLERRMTIAEAKNALGVNPEQSRQLRDAFYKV 341
                  4778*****************9999999999999*********96257778899*********************998776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (537 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                      1284  (0.0716158); expected 358.6 (0.02)
Passed bias filter:                      582  (0.0324614); expected 358.6 (0.02)
Passed Vit filter:                        40  (0.00223102); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.59u 0.26s 00:00:00.85 Elapsed: 00:00:00.42
# Mc/sec: 3802.32
//
Query:       KHJ35549.1  [L=594]
Description: putative myb dna-binding domain containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    4.1e-18   65.3   1.1    2.5e-10   40.4   0.8    2.8  2  Myb_DNA-binding  Myb-like DNA-binding domain
    6.9e-14   51.8   0.9    6.4e-06   26.3   0.0    3.4  3  Myb_DNA-bind_6   Myb-like DNA-binding domain
    4.3e-06   26.7   0.1      0.055   13.5   0.0    2.7  2  SLIDE            SLIDE
  ------ inclusion threshold ------
      0.033   14.3   0.1          3    8.0   0.0    2.6  2  CHDCT2           CHDCT2 (NUC038) domain


Domain annotation for each model (and alignments):
>> Myb_DNA-binding  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.4   0.8   5.5e-14   2.5e-10       1      44 [.     242     290 ..     242     291 .. 0.96
   2 !   22.3   0.0   2.5e-08   0.00011       1      44 [.     375     422 ..     375     424 .. 0.96

  Alignments for each domain:
  == domain 1  score: 40.4 bits;  conditional E-value: 5.5e-14
                      CSSSBHHHHHHHHHHHHHHT.TCHHHHHH....HHTSS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgkWteeEdelLleavkkhG.nrWkkIae....rlggRtekqcrsrwrn 44 
                      r+kWteeE ++Ll +++khG ++W+ I++     ++ R+  + ++rwr+
       KHJ35549.1 242 RKKWTEEETNNLLLGIHKHGvGCWADILHdscfVFNERSSSDLKDRWRT 290
                      79***************************99988889**********97 PP

  == domain 2  score: 22.3 bits;  conditional E-value: 2.5e-08
                      CSSSBHHHHHHHHHHHHHHTTCHHHHHH..HHT..SS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgkWteeEdelLleavkkhGnrWkkIae..rlg..gRtekqcrsrwrn 44 
                      r k+t++Ed  +le+ + +G  W+kI +  rl+  +R + + r+r+rn
       KHJ35549.1 375 RRKFTKDEDCAILEGYNTFGPAWSKIQKdpRLNllSRQPTDLRDRFRN 422
                      689***********************999*99999************8 PP

>> Myb_DNA-bind_6  Myb-like DNA-binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0      0.14   6.3e+02      22      60 .]      66     105 ..      64     105 .. 0.87
   2 !   21.0   0.1   6.5e-08   0.00029       1      46 [.     245     294 ..     245     309 .. 0.86
   3 !   26.3   0.0   1.4e-09   6.4e-06       1      50 [.     378     431 ..     378     438 .. 0.91

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.14
  Myb_DNA-bind_6  22 nIaealn..rRtpkqcfdrwknkLrpkisrkkwskeedirL 60 
                     ++a++ln  + t++q+   + + L+p i +++++k+ d+rL
      KHJ35549.1  66 PVARELNreHETSSQINLGHSS-LSPTIDDENLFKTIDRRL 105
                     6899999888899999999999.*********999888776 PP

  == domain 2  score: 21.0 bits;  conditional E-value: 6.5e-08
  Myb_DNA-bind_6   1 WteeEdeiLlklvekyg.ndWknI..aea..lnrRtpkqcfdrwknkLrpk 46 
                     WteeE+  Ll +  k+g   W  I   ++  +n R++++++drw++ ++p+
      KHJ35549.1 245 WTEEETNNLLLGIHKHGvGCWADIlhDSCfvFNERSSSDLKDRWRT-CCPD 294
                     *****************669****885553458*************.8776 PP

  == domain 3  score: 26.3 bits;  conditional E-value: 1.4e-09
  Myb_DNA-bind_6   1 WteeEdeiLlklvekygndWknIaea..ln..rRtpkqcfdrwknkLrpkisrk 50 
                     +t++Ed ++l+++ ++g  W++I++   ln   R+p++++dr++nk ++k+ ++
      KHJ35549.1 378 FTKDEDCAILEGYNTFGPAWSKIQKDprLNllSRQPTDLRDRFRNKFKDKFLKN 431
                     79***********************98766888************999987554 PP

>> SLIDE  SLIDE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.0   1.2e-05     0.055      40      78 ..     233     271 ..     211     309 .. 0.76
   2 !   10.3   0.1   0.00012      0.53      14      80 ..     337     405 ..     325     422 .. 0.69

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.2e-05
       SLIDE  40 ikyppsnkgkkeyteeeDrfllvllakyGygnyekikke 78 
                 ik p + +++k++teee + ll  ++k+G+g + +i ++
  KHJ35549.1 233 IKCPKNIATRKKWTEEETNNLLLGIHKHGVGCWADILHD 271
                 555656666667********************9887654 PP

  == domain 2  score: 10.3 bits;  conditional E-value: 0.00012
       SLIDE  14 ieklkelkellkkkveqyknplqelkikyp...psnkgkkeyteeeDrfllvllakyGygnyekikkeir 80 
                   k++ +k+  ++   +  ++l +l i+ p   +s ++++++t++eD ++l  ++ +G   + ki+k+ r
  KHJ35549.1 337 STKNNLIKSRKRRSHRKKLEDLFRLGINGPlrqSSRRERRKFTKDEDCAILEGYNTFGPA-WSKIQKDPR 405
                 44444445444555555555666666776655466666788***********99988876.888887654 PP

>> CHDCT2  CHDCT2 (NUC038) domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.0   0.0   0.00068         3      12      39 ..     252     278 ..     242     288 .. 0.80
   2 ?    3.5   0.0     0.016        70      14     102 ..     387     474 ..     379     502 .. 0.67

  Alignments for each domain:
  == domain 1  score: 8.0 bits;  conditional E-value: 0.00068
      CHDCT2  12 WllagvvlhGyaRwqDiqndprfaiine 39 
                  ll g+ +hG + w Di  d+ f + ne
  KHJ35549.1 252 NLLLGIHKHGVGCWADILHDSCF-VFNE 278
                 59****************99866.4555 PP

  == domain 2  score: 3.5 bits;  conditional E-value: 0.016
      CHDCT2  14 lagvvlhGyaRwqDiqndprfaiinepFkseaekgnfleiknkflarrfklleqalvieeqlrraallnl..qeekekvgslaqrfaelel 102
                 l g  ++G a w+ iq dpr+ +++    +  ++ +  ++k kfl++    ++  ++ ++++r  ++++l  ++++e+ ++++++ + ++ 
  KHJ35549.1 387 LEGYNTFGPA-WSKIQKDPRLNLLSRQPTDLRDRFR-NKFKDKFLKNNR-YIDPLITQKNDYRTYDTVDLfcEDANERGNQVSAKNNAMKS 474
                 4444444433.99***********987666665533.678999998754.47777777888888888777644444444444444444433 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (594 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       560  (0.0312343); expected 358.6 (0.02)
Passed bias filter:                      358  (0.0199677); expected 358.6 (0.02)
Passed Vit filter:                        18  (0.00100396); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.57u 0.25s 00:00:00.82 Elapsed: 00:00:00.43
# Mc/sec: 4109.29
//
Query:       KHJ35550.1  [L=515]
Description: putative sporulation protein rmd1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-54  184.3   0.1    3.9e-54  183.4   0.1    1.5  1  DUF155    Uncharacterised ACR, YagE family COG1723


Domain annotation for each model (and alignments):
>> DUF155  Uncharacterised ACR, YagE family COG1723
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  183.4   0.1   2.2e-58   3.9e-54       1     175 [.     290     461 ..     290     462 .. 0.95

  Alignments for each domain:
  == domain 1  score: 183.4 bits;  conditional E-value: 2.2e-58
      DUF155   1 vfiFknGsvVfwgldeeeeknflnkllkflneeselpreeeqeteeleyvydeqsessrikgdvivl.kskslleklaiShalaqSvkLdvlEesldel 98 
                 +fiF++G+vV+wg++ ++e++fl+++ +f ne+    + +  ete ++++y++ +++++i++d i l ++   ++klaiShalaqSvk +++Ee++d++
  KHJ35550.1 290 IFIFEYGVVVIWGMSPQHEQQFLKEIARFENEK---LDPDDIETECFNFYYTQ-EYQPQIYNDFISLrDKGAYMTKLAISHALAQSVKTSLFEELVDNT 384
                 7****************************8886...45555559*****9976.999**********66669*************************** PP

      DUF155  99 lestekipkelakkgklklsrkellkktgellslrinlnlkselldtPdffWeepeleslyeavseyleikeRikiL 175
                 +e++++ip ++a++gk++lsr+++  ++gel+ lrin+ l+ ++ldtP++fW ep+le++y+av++ylei++R+ +L
  KHJ35550.1 385 IETCKDIPGQIANTGKISLSRTQINMQIGELFILRINIHLNGSILDTPEIFWLEPHLEPVYQAVRSYLEIDQRVSLL 461
                 **************************************************************************987 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (515 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       832  (0.0464053); expected 358.6 (0.02)
Passed bias filter:                      497  (0.0277205); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.58u 0.22s 00:00:00.80 Elapsed: 00:00:00.41
# Mc/sec: 3784.55
//
Query:       KHJ35551.1  [L=1659]
Description: putative dna replication atp-dependent helicase dna2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
      4e-65  219.5   0.1    1.1e-64  218.0   0.1    1.9  1  Dna2             DNA replication factor Dna2
    2.8e-50  170.7   0.0    5.7e-50  169.7   0.0    1.6  1  AAA_12           AAA domain
      1e-28  100.9   0.1    1.8e-15   57.4   0.0    3.5  4  AAA_11           AAA domain
    5.4e-12   45.8   0.0    1.2e-11   44.7   0.0    1.6  1  AAA_30           AAA domain
    7.6e-11   42.5   0.0    1.6e-10   41.5   0.0    1.6  1  AAA_19           AAA domain
    3.1e-08   33.9   0.1    1.2e-07   32.0   0.1    2.0  2  Cas_Cas4         Domain of unknown function DUF83
    0.00014   21.8   0.0    0.00035   20.5   0.0    1.7  1  Helicase_RecD    Helicase
     0.0002   21.2   0.4        5.5    6.6   0.0    4.2  4  Viral_helicase1  Viral (Superfamily 1) RNA helicase
     0.0017   17.9   0.1     0.0017   17.9   0.1    2.8  3  UvrD-helicase    UvrD/REP helicase N-terminal domain
     0.0022   17.6   0.0      0.004   16.8   0.0    1.4  1  SRP54            SRP54-type protein, GTPase domain
  ------ inclusion threshold ------
      0.012   15.1   0.3       0.28   10.7   0.0    2.6  3  AAA_7            P-loop containing dynein motor region
      0.032   14.3   0.1       0.35   10.9   0.0    2.3  2  CbiA             CobQ/CobB/MinD/ParA nucleotide binding domai
      0.037   14.4   0.0       0.12   12.8   0.0    1.8  1  AAA_16           AAA ATPase domain
      0.042   13.4   0.0       0.37   10.3   0.0    2.2  2  AAA_25           AAA domain
      0.044   13.9   1.7       0.07   13.2   0.1    2.2  2  DUF87            Helicase HerA, central domain
      0.099   13.2   0.2        1.8    9.1   0.0    2.9  2  ABC_tran         ABC transporter
       0.46   10.5   0.0       0.46   10.5   0.0    3.1  3  ResIII           Type III restriction enzyme, res subunit


Domain annotation for each model (and alignments):
>> Dna2  DNA replication factor Dna2
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.0   0.1   1.1e-67   1.1e-64       6     202 ..     564     761 ..     559     762 .. 0.98

  Alignments for each domain:
  == domain 1  score: 218.0 bits;  conditional E-value: 1.1e-67
        Dna2   6 ekktvvLrddWaetsvekgdiihivgkfe.eekiiidnesnllIlhPdlLvsaTsvanslsClRravLqerlkvsgesskamliGtilHelfqkallee 103
                 + + v+Lr+ W+e++v+++ ++h++g+f+ ++++iid+++nl+IlhPd+L+s+T+va+s+sC RravLq+r+k+++ ++ ++++GtilHe+fq+a+ ++
  KHJ35551.1 564 NLRFVHLRGIWVEIPVTVDVFVHVIGSFNkNGHCIIDDAENLIILHPDHLISSTVVADSFSCVRRAVLQDRIKATSGPNPSLVYGTILHEIFQSAMVSN 662
                 6678*************************99******************************************************************** PP

        Dna2 104 eldkekleelldklleknleelyalglteeeakeeikekleeiekwakkyvkksnkakakvekkkekkeklsiskvldiEEniwspkyGLKGkiDatve 202
                 ++d+ +l el++++  k++e+ly +++++ ea   ++ k++e+++wa+k+++  +k+ a v++ ++++++++i+k+ldiEE+iwsp++GLKG+iDatv+
  KHJ35551.1 663 RWDSAWLTELIKNIAIKHVEDLYIVKIQVPEAVTYLQGKMHEMQSWANKFISPYPKPGALVKSLNGASSSMCIDKLLDIEEHIWSPTFGLKGNIDATVQ 761
                 **************************************************************************************************8 PP

>> AAA_12  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.7   0.0   5.4e-53   5.7e-50       2     197 ..    1303    1526 ..    1302    1528 .. 0.93

  Alignments for each domain:
  == domain 1  score: 169.7 bits;  conditional E-value: 5.4e-53
      AAA_12    2 erSlferllkkekekvvlLdtqYRmhpeIsrfpsklfYkgkLkdaesvkkrele.................................aqealeeple 65  
                  + Slf  l++ ++ +vv L++qYRm+++I+ ++++l+Y+g+Lk++++ + +++                                  +  +l +p +
  KHJ35551.1 1303 DISLFMLLSEGHPDSVVYLEHQYRMCEDIMTLSNSLIYNGRLKCGNQETAQRKLlvhnmdnlqychtlpttssyskniclgpaesrcWLYDLITPAT 1399
                  78*******************************************966666655689999************************************* PP

      AAA_12   66 plvfidvekseeekekke..ksyiNeeEaelvvklvekllkkgseeerkkigvitpYraqvellkkklkekeeeksekeievntvdgfQGrekdvii 160 
                  +++fi+++     +++++  ++++N++Ea+l++ lv+ ll+ g+++  ++igv+t Yr+q+ ll++ l+++ +e     +e++t d+fQGr+k+vii
  KHJ35551.1 1400 RVAFINTDPLLPLSREEArgNRIVNPTEANLCTLLVNGLLSVGVSA--SNIGVMTHYRSQLALLNHYLRAH-KE-----VEMHTADRFQGRDKEVII 1488
                  *******87765555544569*************************..*********************43.22.....99**************** PP

      AAA_12  161 lslVRsnekkeig.flkderrlNValTRAkskliivGn 197 
                  lslVRsn+ + ig +lkd+rr+NVa+TRAk+kl+++G+
  KHJ35551.1 1489 LSLVRSNDAQLIGeLLKDWRRINVAFTRAKTKLLVIGS 1526
                  *************************************7 PP

>> AAA_11  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.5       4.6   4.9e+03     123     123 ..     300     300 ..     198     370 .. 0.40
   2 ?   -3.4   0.9       6.4   6.8e+03      99     177 ..     445     529 ..     412     539 .. 0.56
   3 !   51.3   0.0   1.3e-16   1.3e-13       2     108 ..    1126    1213 ..    1125    1229 .. 0.91
   4 !   57.4   0.0   1.7e-18   1.8e-15     194     260 ..    1231    1294 ..    1215    1295 .. 0.92

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 4.6
      AAA_11 123 a 123
                 +
  KHJ35551.1 300 V 300
                 1 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 6.4
      AAA_11  99 riseavksvsleekvekrlekee.kaqlakeiskeleklakelrafeeeeek.....eklkkskekskskleqerrklkkerkel 177
                 ++++++ sv le  v++  +++  + + ++ i+k++  ++k ++  +++e +     +   k++e s  + ++++++l++ ++ +
  KHJ35551.1 445 DSEDDLLSVDLELLVSQYDNQSGtELKNMSPIRKTSLCQEKIIKTASDDEFSddgldDDDFKAAEASTLQTHNSLSTLQQRARAI 529
                 4566777777777777777666554444555555555555555433333332344443333333333333333444444433333 PP

  == domain 3  score: 51.3 bits;  conditional E-value: 1.3e-16
      AAA_11    2 lndsqreaiksalseseitliqGPPGtgKTktivellsqllsrrkseeeksakpriLvCapSNaAvDellerllrglldsegekykpkivRvgneee 98  
                  +n +qr+ai++++s ++ +li G PGtgKT+ti++++++l          s+++ +L+++ +++AvD++l++l +         +++ i+R+g+ + 
  KHJ35551.1 1126 INVDQRRAIEKVMSAEDYALILGMPGTGKTTTIAYMIRAL---------ISQGKSVLLTSYTHTAVDNILLKLKD---------QSIPILRLGQLS- 1203
                  6899************************************.........689*********************99.........999*********. PP

      AAA_11   99 riseavksvs 108 
                  +is++v+++ 
  KHJ35551.1 1204 KISPEVQEFV 1213
                  8999998864 PP

  == domain 4  score: 57.4 bits;  conditional E-value: 1.7e-18
      AAA_11  194 deaeivltTlsgagsklleklakkfdvviIDEAaqavEpstliPlrlgakkvvLvGDpkQLpatvis 260 
                  +++ iv+tT+ g+ ++ +++    fd++i+DEA+q + p +l P+rl  + +vLvGD+ QLp+ v +
  KHJ35551.1 1231 HDTPIVATTCLGINHPIFNER--LFDYCIVDEASQITLPVCLGPIRLS-HTFVLVGDHYQLPPLVQN 1294
                  5678*****************..8************************.**************9976 PP

>> AAA_30  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.7   0.0   1.2e-14   1.2e-11       2     131 ..    1126    1291 ..    1125    1350 .. 0.80

  Alignments for each domain:
  == domain 1  score: 44.7 bits;  conditional E-value: 1.2e-14
      AAA_30    2 lnaeQaaavealltsgdrvavltGpAGtGKttalkalreaweaaggrviglAptgkaAkvLa................eelgieastiakllkrlk. 81  
                  +n +Q++a+e++++ +d +a++ G +GtGKtt+++ + +a+ ++g++v++ + t++a +++                                  k 
  KHJ35551.1 1126 INVDQRRAIEKVMSAED-YALILGMPGTGKTTTIAYMIRALISQGKSVLLTSYTHTAVDNILlklkdqsipilrlgqlS----------------Ki 1205
                  6899************8.******************************************7734555555554444440................23 PP

      AAA_30   82 ...........................................grarlepg..tllivDEagmvdtkqlaallkaaekagakvilvGDerQlasV 131 
                                                             +     ++  +  ivDEa+ +        ++  ++     +lvGD+ Ql++ 
  KHJ35551.1 1206 spevqefvtlaantkssfeeirsdwhdtpivattclginhpifN-----ERlfDYCIVDEASQITLPVCLGPIRLSHT----FVLVGDHYQLPPL 1291
                  333333334444445555555589999***********864331.....3336***********99999887777766....9*********985 PP

>> AAA_19  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   41.5   0.0   1.6e-13   1.6e-10       1     143 [.    1130    1290 ..    1130    1293 .. 0.76

  Alignments for each domain:
  == domain 1  score: 41.5 bits;  conditional E-value: 1.6e-13
      AAA_19    1 qreav.e.alkekvllvtaGpGtGKTrvlkhivallvelggvkpeeillvaftgrAakelrerlaalgaeatTiHrlal.................. 77  
                  qr+a+ +  ++e+  l+++ pGtGKT+++  +++ l+++g    +++ll ++t+ A++++  +l+    ++  + +l+                   
  KHJ35551.1 1130 QRRAIeKvMSAEDYALILGMPGTGKTTTIAYMIRALISQG----KSVLLTSYTHTAVDNILLKLKDQSIPILRLGQLSKispevqefvtlaantkss 1222
                  8899955788999***************************....89***************999888888555555544666666666655566666 PP

      AAA_19   78 .....ldfddlltealelle..eaeeekklqeee.llivDEfqdvd.elqyrLlkallgekkklllvGDpdQliy 143 
                        d++d+   a + l   +   ++ l   + + ivDE+++++ ++    ++      ++++lvGD+ Ql++
  KHJ35551.1 1223 feeirSDWHDTPIVATTCLGinHPIFNERL---FdYCIVDEASQITlPVCLGPIRLS----HTFVLVGDHYQLPP 1290
                  666776777777667777665422223333...3599*********88876655543....45**********97 PP

>> Cas_Cas4  Domain of unknown function DUF83
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0       7.5   7.9e+03       8      41 ..     622     655 ..     617     682 .. 0.71
   2 !   32.0   0.1   1.2e-10   1.2e-07      63     161 ..     770     872 ..     749     873 .. 0.81

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 7.5
    Cas_Cas4   8 yliCkrklwlish.eitleensetvelGkllhees 41 
                  + C r++ l  + + t   n + v+ G +lhe  
  KHJ35551.1 622 SFSCVRRAVLQDRiKATSGPNPSLVY-GTILHEIF 655
                 57899999999985666666666666.*****933 PP

  == domain 2  score: 32.0 bits;  conditional E-value: 1.2e-10
    Cas_Cas4  63 ekeklvvvEvKkskkkeeaaklQllyYlllLe.kkgveikeGvleypkekkreev.elteelreelekaikeieeiisse..kppkvkkkkiCkkCaya 157
                 +++ +v++E+K +k+ ++++ +Q   Y llL  + ++e+  G+l+y+++ +++++  + +elr+ + +  + +  + +++   pp  kk+++C+kC  +
  KHJ35551.1 770 QRTLTVPFELKTGKNPSTSHIAQTALYSLLLSdRYDIEVAYGILYYMETSETKQIpAIRHELRHMIMQRNELACFVRERSfqLPPMLKKEHLCNKCYAK 868
                 3445677*************************9*********************945677777777776666666666656489999999******988 PP

    Cas_Cas4 158 elCl 161
                   C+
  KHJ35551.1 869 VPCF 872
                 8887 PP

>> Helicase_RecD  Helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.5   0.0   3.4e-07   0.00035       2     107 ..    1146    1269 ..    1145    1282 .. 0.67

  Alignments for each domain:
  == domain 1  score: 20.5 bits;  conditional E-value: 3.4e-07
  Helicase_RecD    2 ltAdRGRGKSaalGlalaaliaegksnilvtapskenvktlfefla.kglealglke.............eekkkkaekaelrvr......kqr 75  
                     + + +G+GK+++++ ++ ali++gk ++l+t+ ++++v++++  l+ +++  l+l +                         +++      + r
     KHJ35551.1 1146 ILGMPGTGKTTTIAYMIRALISQGK-SVLLTSYTHTAVDNILLKLKdQSIPILRLGQlskispevqefvtL-----------AANtkssfeEIR 1227
                     77889******************98.8***********998777651455555555565565543333331...........111222233333 PP

  Helicase_RecD   76 ieyiapdellklkeqa.............dllvvDEAAaiplpll 107 
                      +++    ++++   +             d  +vDEA++i lp+ 
     KHJ35551.1 1228 SDWHDTPIVATT---ClginhpifnerlfDYCIVDEASQITLPVC 1269
                     334433333333...13345667788888************9975 PP

>> Viral_helicase1  Viral (Superfamily 1) RNA helicase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.0       5.7     6e+03     116     152 ..     785     820 ..     781     841 .. 0.78
   2 !    6.6   0.0    0.0052       5.5       2      30 ..    1145    1171 ..    1144    1192 .. 0.77
   3 ?    3.2   0.0      0.06        63      61     103 ..    1251    1291 ..    1209    1302 .. 0.78
   4 !    6.1   0.0    0.0077       8.1     175     233 ..    1463    1524 ..    1426    1525 .. 0.79

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 5.7
  Viral_helicase1 116 sslshrvgrrttyllpsdvaeilsakvgteveversg 152
                      +s+sh  +   ++ll sd+++i+ a  g   + e s+
       KHJ35551.1 785 PSTSHIAQTALYSLLLSDRYDIEVAY-GILYYMETSE 820
                      678999999999*********99998.5544444444 PP

  == domain 2  score: 6.6 bits;  conditional E-value: 0.0052
  Viral_helicase1    2 vvhGvpGcGKStlirkllrtsliltvnrp 30  
                       ++ G+pG GK+t i   +r    ++++++
       KHJ35551.1 1145 LILGMPGTGKTTTIAYMIRA--LISQGKS 1171
                       689**********9999888..5555544 PP

  == domain 3  score: 3.2 bits;  conditional E-value: 0.06
  Viral_helicase1   61 tkgkililDEylllhaGyill.laalskaklvilfGDplQipfh 103 
                         ++++i+DE+ + +   + + l  +  +++++l+GD++Q p  
       KHJ35551.1 1251 RLFDYCIVDEASQIT---LPVcLGPIRLSHTFVLVGDHYQLPPL 1291
                       457899*****9999...6664556778889*********9865 PP

  == domain 4  score: 6.1 bits;  conditional E-value: 0.0077
  Viral_helicase1  175 alkealgvrevttvhevqGltfdkVtlvllketdlelis...esrenllvAlTRhrkslvil 233 
                       + ++a+++ e++t    qG   ++ +l l +++d +li    ++     vA+TR++++l+++
       KHJ35551.1 1463 HYLRAHKEVEMHTADRFQGRDKEVIILSLVRSNDAQLIGellKDWRRINVAFTRAKTKLLVI 1524
                       44556666699********99999998888888877777788789999**********9876 PP

>> UvrD-helicase  UvrD/REP helicase N-terminal domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.1   0.7         1   1.1e+03     146     213 ..      24      90 ..       7     191 .. 0.68
   2 ?   -1.6   0.6       1.5   1.5e+03     168     203 ..     363     432 ..     266     532 .. 0.57
   3 !   17.9   0.1   1.6e-06    0.0017       2      67 ..    1127    1191 ..    1126    1227 .. 0.82

  Alignments for each domain:
  == domain 1  score: -1.1 bits;  conditional E-value: 1
                    TTTHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHCHHHHHHHHHHHTTCCTTHHCHSSTSCSHHHHHH CS
  UvrD-helicase 146 slnldkkkleklikelsksrnikkeelslskskaeelrelvskakekqlspkelkkafekasdlqkki 213
                    +  l+k+k+++++k l+ + +++  + + +k +  ++++  ++ k+  l++  + ++ e+ +  ++ki
     KHJ35551.1  24 RSMLKKQKINPNSKPLQEKPPLPVSTATKNKLSNFQYAAQANNQKKTRLNQWLNSEK-ENGDYVNRKI 90 
                    455666777777777777777777777777777777777776666666665544442.2333333333 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.5
                    H..................................HHHCCCHHHHHCHHHHHHHHHHHTTCCTTHHCHSS CS
  UvrD-helicase 168 k..................................keelslskskaeelrelvskakekqlspkelkkaf 203
                    +                                  +e  +++     +l+   s+ k++  ++ +l++ +
     KHJ35551.1 363 RsentdygdfdvddfdtnifqvsrsnigapmlhheIELTPFKPLGTSNLKSSSSEKKSRSCITSNLQPFN 432
                    1222335555555555555555555555566666644444444444444444444444444444444433 PP

  == domain 3  score: 17.9 bits;  conditional E-value: 1.6e-06
                     SHHHHHHHHS...-SSEEEEEE-TTSSHHHHHHHHHHHHHHTSSSTGGGEEEEESSHHHHHHHHHHHHH CS
  UvrD-helicase    2 npeqreaias...lggpilveAsAGsGKTfvlaerilrlikeeeiepdrilvvTFTnkAaeElkeRiee 67  
                     n +qr+ai++    +   l++  +G+GKT+++a+ i  li ++    +++l+  +T  A + +  +++ 
     KHJ35551.1 1127 NVDQRRAIEKvmsAEDYALILGMPGTGKTTTIAYMIRALISQG----KSVLLTSYTHTAVDNILLKLKD 1191
                     567888877755467889*************************....99********999988777766 PP

>> SRP54  SRP54-type protein, GTPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.8   0.0   3.8e-06     0.004       3      36 ..    1143    1176 ..    1141    1211 .. 0.91

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 3.8e-06
                  EEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEE CS
       SRP54    3 villvGlqGaGKTttlaKLaallkkegkkvllva 36  
                  + l++G+ G+GKTtt+a + + l ++gk+vll +
  KHJ35551.1 1143 YALILGMPGTGKTTTIAYMIRALISQGKSVLLTS 1176
                  5799***************************986 PP

>> AAA_7  P-loop containing dynein motor region
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00027      0.28      21      60 ..    1129    1168 ..    1125    1188 .. 0.81
   2 ?   -3.4   0.0       5.7   6.1e+03       6      37 ..    1350    1381 ..    1348    1383 .. 0.82
   3 ?    1.3   0.0       0.2   2.1e+02     118     175 ..    1496    1553 ..    1491    1557 .. 0.92

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00027
       AAA_7   21 rysyllelllknkkpvllvGptGtGKtviikdllkkldke 60  
                   ++  +e++++++   l+ G  GtGKt++i  ++++l ++
  KHJ35551.1 1129 DQRRAIEKVMSAEDYALILGMPGTGKTTTIAYMIRALISQ 1168
                  566778999**********************999988754 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 5.7
       AAA_7    6 eakfseilVptvdtvrysyllelllknkkpvl 37  
                  e+  +++lV+++d+++y + l +  + +k+++
  KHJ35551.1 1350 ETAQRKLLVHNMDNLQYCHTLPTTSSYSKNIC 1381
                  66678999*******99999999988888876 PP

  == domain 3  score: 1.3 bits;  conditional E-value: 0.2
       AAA_7  118 gaqppiellRqlldyggwYdrkklefkeikdvqlvaamgppgggrneitpRllrhfnv 175 
                  +aq   ell+ +   +  + r k+++  i  +  +   +p   +++e+ +R+++ + +
  KHJ35551.1 1496 DAQLIGELLKDWRRINVAFTRAKTKLLVIGSLETLKGSEPRTTNEEEMVSRFVKLMEI 1553
                  578888**********************************************998765 PP

>> CbiA  CobQ/CobB/MinD/ParA nucleotide binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.9   0.0   0.00033      0.35       9      32 ..    1151    1174 ..    1144    1228 .. 0.96
   2 ?    0.1   0.0      0.75   7.9e+02      29      97 ..    1400    1544 ..    1344    1556 .. 0.83

  Alignments for each domain:
  == domain 1  score: 10.9 bits;  conditional E-value: 0.00033
                  TSSHHHHHHHHHHHHHHTT--EEE CS
                  xxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA    9 GvGKTtlaanLaralarrglrVll 32  
                  G+GKTt+ a ++ral  +g+ Vll
  KHJ35551.1 1151 GTGKTTTIAYMIRALISQGKSVLL 1174
                  9*********************98 PP

  == domain 2  score: 0.1 bits;  conditional E-value: 0.75
                  -EEEEEEEESSCCCCHHTTEB-HHHH....................................................................... CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxx....................................................................... RF
        CbiA   29 rVllvDaDpqannlaileglendiep....................................................................... 54  
                  rV+ + +Dp  ++++  e   n+i +                                                                       
  KHJ35551.1 1400 RVAFINTDPLLPLSR-EEARGNRIVNpteanlctllvngllsvgvsasnigvmthyrsqlallnhylrahkevemhtadrfqgrdkeviilslvrsn 1495
                  888888888888888.666666666688999999999999999999999999999999999999999999999999999999999999999999999 PP

                  CCHCCCHHHHHHCHCHHHH.........EEEEEEEEESS...-TTCHHHH CS
                  xxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxx RF
        CbiA   55 dlkrllellealgkkkall.......lkiagvvlnrvdgeneetllkeal 97  
                  d++ ++ell++ ++ +  +       l+++g + +  ++e ++t+++e++
  KHJ35551.1 1496 DAQLIGELLKDWRRINV-AftraktkLLVIGSLETLKGSEPRTTNEEEMV 1544
                  99999999977665433.33666777888887777777777777766665 PP

>> AAA_16  AAA ATPase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.8   0.0   0.00011      0.12      15      60 ..    1133    1178 ..    1129    1265 .. 0.72

  Alignments for each domain:
  == domain 1  score: 12.8 bits;  conditional E-value: 0.00011
      AAA_16   15 alervrsgrpelvllsGesGvGKsslvrellralekdg.giflrgkc 60  
                  a+e+v s +  + l+ G++G+GK++ +    ral  +g  ++l+  +
  KHJ35551.1 1133 AIEKVMSAE-DYALILGMPGTGKTTTIAYMIRALISQGkSVLLTSYT 1178
                  566665554.799**************99999998885333333322 PP

>> AAA_25  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.3   0.0   0.00035      0.37      21      65 ..    1129    1174 ..    1107    1188 .. 0.74
   2 ?   -0.1   0.0      0.54   5.7e+02     102     170 ..    1485    1549 ..    1459    1553 .. 0.65

  Alignments for each domain:
  == domain 1  score: 10.3 bits;  conditional E-value: 0.00035
      AAA_25   21 prrwlvkgllpagelallaGapgtGKttlaldlalava.tGkpwlg 65  
                   +r  ++ ++ a++ al+ G pgtGKtt    +  a+  +Gk++l 
  KHJ35551.1 1129 DQRRAIEKVMSAEDYALILGMPGTGKTTTIAYMIRALIsQGKSVLL 1174
                  466789999*******************999999988878888765 PP

  == domain 2  score: -0.1 bits;  conditional E-value: 0.54
      AAA_25  102 rllvldlagveslpLfakdrggtl..ltadvdaleaaieevegvrlvviDplsralgg..densnsdv.galve 170 
                  ++ +l+l+++ + +L        +  l  d++++  a ++ ++ +l+vi +l  + g     ++++++ +++v+
  KHJ35551.1 1485 EVIILSLVRSNDAQL--------IgeLLKDWRRINVAFTR-AKTKLLVIGSLETLKGSepRTTNEEEMvSRFVK 1549
                  455555544422222........23345788999888888.679999999999999996533333444477776 PP

>> DUF87  Helicase HerA, central domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.0   0.1       5.8   6.2e+03     131     191 ..     366     445 ..     319     454 .. 0.67
   2 ?   13.2   0.1   6.6e-05      0.07      27      57 ..    1145    1174 ..    1141    1175 .. 0.89

  Alignments for each domain:
  == domain 1  score: -3.0 bits;  conditional E-value: 5.8
       DUF87 131 keekeklssdepveklleelk.....................kekeelrklknqaiarlldkledllrkggsfsnsstdlia 191
                 +++++++++d+++ ++++  +                     +++++++++ +++++ + + l+ + +  +++  +++d+++
  KHJ35551.1 366 NTDYGDFDVDDFDTNIFQVSRsnigapmlhheieltpfkplgTSNLKSSSSEKKSRSCITSNLQPFNKISNND--TTHDFDD 445
                 4566666677777777766667777777777777777777776777778888888888888888887777777..4444444 PP

  == domain 2  score: 13.2 bits;  conditional E-value: 6.6e-05
       DUF87   27 AilgsTGsGKSntvavLleellekkgatili 57  
                  +ilg+ G+GK++t+a++++ l+ ++g ++l+
  KHJ35551.1 1145 LILGMPGTGKTTTIAYMIRALI-SQGKSVLL 1174
                  69********************.77777775 PP

>> ABC_tran  ABC transporter
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1      0.93   9.8e+02      53     124 ..     413     534 ..     395     538 .. 0.56
   2 ?    9.1   0.0    0.0017       1.8      11      46 ..    1141    1176 ..    1133    1238 .. 0.75

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.93
                 -HHHCCHCEEEE-SS--S-TTSBHHHH..........................................HHHTCHHHHHHHSTTGG..........TTC CS
                 xxxxxxxxxxxxxxxxxxxxxxxxxxx..........................................xxxxxxxxxxxxxxxxx..........xxx RF
    ABC_tran  53 eleslrkeigvlpqepqlfpeltvren..........................................esdeeiekalsklglke..........lkd 99 
                 + +s +k+ ++++ + q f+++++ ++                                                ek++++ +++e          +k+
  KHJ35551.1 413 SSSSEKKSRSCITSNLQPFNKISNNDTthdfddseddllsvdlellvsqydnqsgtelknmspirktslC----QEKIIKTASDDEfsddglddddFKA 507
                 4566777788888888888888766667888777777777777777776555555544444444433330....3333333333332222222222222 PP

                 BGESTTS.....GGS-HHHHHHHHHHHHHH CS
                 xxxxxxx.....xxxxxxxxxxxxxxxxxx RF
    ABC_tran 100 tvvkssp.....ssLSgGqkqrvalarall 124
                   +         +sLS  q++  a+ r l+
  KHJ35551.1 508 AEA---StlqthNSLSTLQQRARAIQRYLV 534
                 222...022244777777777777777766 PP

  == domain 2  score: 9.1 bits;  conditional E-value: 0.0017
                  TSEEEEEESTTSSHHHHHHHHTTSS--SEEEEEETT CS
                  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF
    ABC_tran   11 gekvaivGenGaGKStLlkllagllkpteGeilldg 46  
                       i+G  G+GK+t ++ +++ l  +  ++ll +
  KHJ35551.1 1141 EDYALILGMPGTGKTTTIAYMIRALISQGKSVLLTS 1176
                  556789*****************9998877775553 PP

>> ResIII  Type III restriction enzyme, res subunit
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.4       3.4   3.6e+03      74     121 ..      55     105 ..      45     125 .. 0.58
   2 ?   -1.6   0.1       2.2   2.4e+03      98     146 ..     952    1002 ..     906    1020 .. 0.62
   3 ?   10.5   0.0   0.00044      0.46       8      59 ..    1130    1174 ..    1123    1263 .. 0.60

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 3.4
                 GGGGTGG....GEEE..ESSS-B--.............-SEEEEEHHHHHHTH... CS
      ResIII  74 fkkflseaykeigkk..vsgdkkka......kekdstnkkilvttiqsldadseee 121
                 +++f+  a+++++kk  ++     +      +++d  n+ki v+ +q++  ++++e
  KHJ35551.1  55 LSNFQYAAQANNQKKtrLN-----QwlnsekENGDYVNRKIQVVGEQKVRGKEKKE 105
                 4444444433311111111.....12233346679999999999999998888554 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 2.2
                  ......-SEEEEEHHHHHHTH..........HHHTTT-SEEEEETGGGTTS CS
      ResIII   98 ekdstnkkilvttiqsldadseee..eeeseellrdrfdviiiDEaHrlga 146 
                  ++++++ +  ++ +q +  + e++   +  +++    ++++i DE  +++ 
  KHJ35551.1  952 SSEENHERNKISRYQYIMVKHESKneFSFLDSQITAGEPIVISDEKGHFAL 1002
                  455666677777777777666444223344555556666999999877665 PP

  == domain 3  score: 10.5 bits;  conditional E-value: 0.00044
                  HHHHHHHHT......TTSEEEEEESTTSTHHHHHHHHHHHH-S.....-EEE CS
      ResIII    8 QeeaienlleklkskrdkrglikmaTGtGKTlvaaklierllkkgkeekflf 59  
                  Q +aie+++    s +d  +++    GtGKT ++a +i++l ++gk   +l+
  KHJ35551.1 1130 QRRAIEKVM----SAEDYALILG-MPGTGKTTTIAYMIRALISQGK--SVLL 1174
                  667777776....2344555555.56****************9977..4544 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (1659 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       911  (0.0508115); expected 358.6 (0.02)
Passed bias filter:                      567  (0.0316247); expected 358.6 (0.02)
Passed Vit filter:                        84  (0.00468515); expected 17.9 (0.001)
Passed Fwd filter:                        17  (0.000948185); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):              17  [number of targets reported over threshold]
# CPU time: 1.06u 0.33s 00:00:01.39 Elapsed: 00:00:00.50
# Mc/sec: 9927.61
//
Query:       KHJ35552.1  [L=639]
Description: putative homeobox domain-containing protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-13   50.6   2.1    2.9e-13   49.4   2.1    1.6  1  Homeodomain  Homeodomain
    0.00011   22.0   0.9    0.00034   20.4   0.9    1.8  1  Homeobox_KN  Homeobox KN domain


Domain annotation for each model (and alignments):
>> Homeodomain  Homeodomain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.4   2.1   3.2e-17   2.9e-13       9      57 .]      54     102 ..      48     102 .. 0.94

  Alignments for each domain:
  == domain 1  score: 49.4 bits;  conditional E-value: 3.2e-17
                  HHHHHHHHHHHHHSSS-SHHHHHHHHHHHTS-HHHHHHHHHHHHHHHHH CS
  Homeodomain   9 keqleeLeklFeenrypsaeereeLAkklgLeerqVkvWFqNrRakekk 57 
                  k++++ Le++F++n++ps+++++ LA++++++  ++ +WFqNrRak k+
   KHJ35552.1  54 KDEVNKLEREFKKNPKPSTQTKKALAEEMNVDLPRINNWFQNRRAKRKQ 102
                  78899*****************************************997 PP

>> Homeobox_KN  Homeobox KN domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.4   0.9   3.8e-08   0.00034       7      39 ..      66      98 ..      64      99 .. 0.95

  Alignments for each domain:
  == domain 1  score: 20.4 bits;  conditional E-value: 3.8e-08
  Homeobox_KN  7 hnPYPseedKeeLlkeTglsvkqitnWFINaRr 39
                 +nP Ps + K+ L++e + +   i+nWF N R+
   KHJ35552.1 66 KNPKPSTQTKKALAEEMNVDLPRINNWFQNRRA 98
                 6999**************************996 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (639 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       728  (0.0406046); expected 358.6 (0.02)
Passed bias filter:                      436  (0.0243181); expected 358.6 (0.02)
Passed Vit filter:                        42  (0.00234257); expected 17.9 (0.001)
Passed Fwd filter:                         2  (0.000111551); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.58u 0.22s 00:00:00.80 Elapsed: 00:00:00.38
# Mc/sec: 5000.96
//
Query:       KHJ35553.1  [L=413]
Description: putative endo-beta-glucanase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
  ------ inclusion threshold ------
        0.3    9.9   4.7       0.62    8.9   4.7    1.4  1  DUF5423   Family of unknown function (DUF5423)


Domain annotation for each model (and alignments):
>> DUF5423  Family of unknown function (DUF5423)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    8.9   4.7   3.4e-05      0.62     221     275 ..      22      74 ..      12      78 .. 0.82

  Alignments for each domain:
  == domain 1  score: 8.9 bits;  conditional E-value: 3.4e-05
     DUF5423 221 thstdseqiltsvspqssdtessssssfhtppnsdkelsdsnssdssssseymda 275
                 t s  +e+ +t v p++s+   +s  sf   p sd +l d   s ss s  ++d+
  KHJ35553.1  22 TTSICAEKQVTMVLPNASNQ--TSDQSFDDEPPSDTDLYDDSKSSSSKSQYFIDT 74 
                 5677789999******9976..56789************9988888888777776 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (413 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       690  (0.0384851); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        25  (0.00139439); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.50u 0.25s 00:00:00.75 Elapsed: 00:00:00.41
# Mc/sec: 2996.69
//
Query:       KHJ35554.1  [L=312]
Description: putative mitochondrial 2-oxodicarboxylate carrier 2 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    6.7e-60  199.0   0.2    3.2e-19   68.6   0.0    3.9  4  Mito_carr        Mitochondrial carrier protein
  ------ inclusion threshold ------
      0.012   16.0   0.1      0.063   13.7   0.0    2.2  2  Tim17            Tim17/Tim22/Tim23/Pmp24 family
       0.11   11.8   0.0       0.18   11.2   0.0    1.2  1  DUF2895          Protein of unknown function (DUF2895)
       0.16   11.1   0.0        9.5    5.3   0.0    3.1  4  Serine_protease  Gammaproteobacterial serine protease


Domain annotation for each model (and alignments):
>> Mito_carr  Mitochondrial carrier protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.0   0.0     0.088   3.9e+02       2      18 ..       6      22 ..       5      25 .. 0.86
   2 !   63.4   0.0   3.1e-21   1.4e-17      22      93 ..      38     110 ..      35     113 .. 0.90
   3 !   61.0   0.0   1.8e-20   7.9e-17       8      95 ..     124     208 ..     122     210 .. 0.95
   4 !   68.6   0.0   7.2e-23   3.2e-19       3      95 ..     214     307 ..     212     309 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.0 bits;  conditional E-value: 0.088
                HHHHHHHHHHHHHHHHH CS
   Mito_carr  2 elsvlkellaGglagav 18
                +ls+  +++aG++ag+ 
  KHJ35554.1  6 PLSFPYQFAAGAVAGIS 22
                678999*********85 PP

  == domain 2  score: 63.4 bits;  conditional E-value: 3.1e-21
                 HHHHHHHHHHHHHHCCCSSTTTSCSS.HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH CS
   Mito_carr  22 vttPldvvKtrlqtqkksskksksaa.ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrll 93 
                 + +PldvvKtr+q+q+++s + + ++ +ld+++ki+++eG++ lyrG+ + +++ ap++a+kf+++++  +++
  KHJ35554.1  38 CRYPLDVVKTRIQLQSNKSVQINPYGgMLDCFQKIVQNEGFARLYRGIEAPVFMEAPKRAIKFAANDFWGKFY 110
                 679*************99977666557**************************************99876665 PP

  == domain 3  score: 61.0 bits;  conditional E-value: 1.8e-20
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSSHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   8 ellaGglagavatlvttPldvvKtrlqtqkksskksksaaildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 ++laG+ aga +++v+ P+d+vK+rlq   +  k+s+     d+l k++++eG+++l+ Gl  +l r +  ++ +f++  +++++l k
  KHJ35554.1 124 SVLAGASAGASEAFVVVPFDLVKIRLQDRVSAMKYSG---PTDCLIKTVRTEGFLALFNGLESTLWRHIFWNSGYFGCIFQVREILPK 208
                 589**************************99999877...9**************************************999999877 PP

  == domain 4  score: 68.6 bits;  conditional E-value: 7.2e-23
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTSCSS.HHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHCT CS
   Mito_carr   3 lsvlkellaGglagavatlvttPldvvKtrlqtqkksskksksaa.ildvlkkiykeeGlrglyrGllpnllrvapasalkfvlyetlkrlllk 95 
                 ++++++l++G+++g+v+t++ tP+dvvK r+q+++k      +++ ++ ++ +i++eeG+r+ly+G+lp+++r  p  ++ +v++  + +++++
  KHJ35554.1 214 TRIINDLVSGAIGGTVGTILNTPMDVVKSRIQNNPKIPGVVPKYSwAWPAIMTIFREEGFRALYKGFLPKVIRLGPGGGILLVVFTAVSDFFKN 307
                 57899*******************************9877655557****************************************99999976 PP

>> Tim17  Tim17/Tim22/Tim23/Pmp24 family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0         1   4.5e+03      83      91 ..      13      21 ..      10      29 .. 0.75
   2 ?   13.7   0.0   1.4e-05     0.063      39      92 ..     178     229 ..     120     245 .. 0.69

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 1
       Tim17 83 vaAGaltGa 91
                +aAGa++G 
  KHJ35554.1 13 FAAGAVAGI 21
                788888886 PP

  == domain 2  score: 13.7 bits;  conditional E-value: 1.4e-05
       Tim17  39 reglrsvgkrgpslGknfgvvgglysgiecaleklRgkediwnsvaAGaltGal 92 
                  +gl s+  r ++  +n g++g+++++ e + ++   k+ i+n +++Ga++G +
  KHJ35554.1 178 FNGLESTLWRHIF--WNSGYFGCIFQVREILPKSDTRKTRIINDLVSGAIGGTV 229
                 3344444444444..69*****************888**************976 PP

>> DUF2895  Protein of unknown function (DUF2895)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.2   0.0     4e-05      0.18     161     194 ..      33      72 ..      20      75 .. 0.71

  Alignments for each domain:
  == domain 1  score: 11.2 bits;  conditional E-value: 4e-05
     DUF2895 161 vkdalvryplrVvrl......dvdrerNPwgLaldcyekk 194
                  k +  rypl Vv++      + + + NP+g  ldc++k 
  KHJ35554.1  33 FKLISCRYPLDVVKTriqlqsNKSVQINPYGGMLDCFQKI 72 
                 567889*******862222114456789*********985 PP

>> Serine_protease  Gammaproteobacterial serine protease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.48   2.2e+03      43      65 ..      75      96 ..      33     104 .. 0.58
   2 ?   -0.8   0.0      0.15   6.6e+02     172     196 ..     120     144 ..     112     156 .. 0.82
   3 ?    5.3   0.0    0.0021       9.5     153     197 ..     196     240 ..     192     249 .. 0.82
   4 ?    1.0   0.0     0.043   1.9e+02      45      59 ..     272     285 ..     263     289 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.48
  Serine_protease 43 sgGlfralYrGflayalagskrr 65
                     ++G+ r lYrG+ a  +    +r
       KHJ35554.1 75 NEGFAR-LYRGIEAPVFMEAPKR 96
                     455444.7888777666555555 PP

  == domain 2  score: -0.8 bits;  conditional E-value: 0.15
  Serine_protease 172 elynkllaGalsGviAtvlttifns 196
                      +    +laGa +G+  +++  +f +
       KHJ35554.1 120 DQRLSVLAGASAGASEAFVVVPFDL 144
                      5566789********9999999876 PP

  == domain 3  score: 5.3 bits;  conditional E-value: 0.0021
  Serine_protease 153 FaalgvvedeiakflkindelynkllaGalsGviAtvlttifnsy 197
                      F ++ +v + + k    ++ ++n l++Ga+ G + t+l t++   
       KHJ35554.1 196 FGCIFQVREILPKSDTRKTRIINDLVSGAIGGTVGTILNTPMDVV 240
                      6777777777777777788999****************9998765 PP

  == domain 4  score: 1.0 bits;  conditional E-value: 0.043
  Serine_protease  45 GlfralYrGflayal 59 
                      G fralY+Gfl+  +
       KHJ35554.1 272 G-FRALYKGFLPKVI 285
                      5.9********9765 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (312 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       304  (0.0169558); expected 358.6 (0.02)
Passed bias filter:                      274  (0.0152825); expected 358.6 (0.02)
Passed Vit filter:                        24  (0.00133861); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.45u 0.23s 00:00:00.68 Elapsed: 00:00:00.39
# Mc/sec: 2406.14
//
Query:       KHJ35555.1  [L=321]
Description: putative 5 3 -nucleotidase [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    9.9e-53  178.8   0.0    1.4e-52  178.3   0.0    1.2  1  SurE             Survival protein SurE
  ------ inclusion threshold ------
      0.013   15.5   0.0      0.022   14.8   0.0    1.4  1  Glyco_transf_4   Glycosyltransferase Family 4
       0.02   15.3   0.0      0.026   15.0   0.0    1.2  1  Glyco_trans_4_4  Glycosyl transferase 4-like domain
      0.032   13.9   0.0       0.72    9.5   0.0    2.1  2  Glyco_transf_5   Starch synthase catalytic domain


Domain annotation for each model (and alignments):
>> SurE  Survival protein SurE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  178.3   0.0   3.1e-56   1.4e-52       2     194 ..       4     219 ..       3     220 .. 0.87

  Alignments for each domain:
  == domain 1  score: 178.3 bits;  conditional E-value: 3.1e-56
                 EEE-SS-TT....-HHHHHHHHHHTTTTSEEEEEEESSS-TTCTTS--SSSEE.......EEEEEECS..................TTTCEEEE.SS-H CS
        SurE   2 LltNDDGie....apgiralvealaaaghevvvvaPdserSgigkaltleepl.......rveseeee..................eeeeeyav.sGtP 70 
                 L++NDDG++    +p++++lv++l++agh+v+vv+P+++rS+igka+ + +++       +                         +eeee+ + +GtP
  KHJ35555.1   4 LVVNDDGPPstqtSPYVYSLVRTLQRAGHNVSVVLPNTQRSWIGKAHIIGQTVkpsyfrpS------LhhkdngtthsrplpplspSEEEEWILvDGTP 96 
                 9********9999**********************************87799955555441......1444556778889999999889999888**** PP

                 HHHHHHHHHTTTTTS.S.SEEEEEEEES---GGGG.GG-HHHHHHHHHHHTTSEEEEEEEESSSSS-SSS---HHHHHHHHHHHHTTETTS-...SS-E CS
        SurE  71 adcvklaleellkekkp.dlVvSGiNhGaNlgtdv.lySGTvgAaleaalegipaiAvSlaskkeeekkeedtfeaaakvaaklveklieklllekvel 167
                 a+cv+++l + ++e+ p dlV+SG+N+G+N+++ + l+SGT+g+aleaal++ ++iA+S++++++++  +++ +++a+++  +l+e l  k ++++v+l
  KHJ35555.1  97 ASCVQIGLYHYFQERGPiDLVISGPNYGRNTTSVFsLSSGTLGGALEAALCKHRSIAISYGFFSRNH--DDEIINEASNLSLRLIEYL-YKNWDNQVDL 192
                 ************999777*******************************************995444..67789**999999999766.66779***** PP

                 EEEEEESS.GCG-SEEEE-B--CCSCE CS
        SurE 168 lnvNvPeleeeeikgvkvtrlgrrrys 194
                 +++N+P +++   k+v +t+++++++s
  KHJ35555.1 193 YSINIPLTKNVGEKKVLWTNILQNYWS 219
                 ******55555556678*******997 PP

>> Glyco_transf_4  Glycosyltransferase Family 4
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.8   0.0   4.8e-06     0.022       7      37 ..      19      49 ..      16      90 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.8 bits;  conditional E-value: 4.8e-06
  Glyco_transf_4  7 hvleLaraLarrGheVtvvtpgddgpleeev 37
                    +v+ L+r L+r+Gh+V+vv p++++    + 
      KHJ35555.1 19 YVYSLVRTLQRAGHNVSVVLPNTQRSWIGKA 49
                    9******************999988776663 PP

>> Glyco_trans_4_4  Glycosyl transferase 4-like domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.0   0.0   5.9e-06     0.026       5      51 ..      18      82 ..      16     151 .. 0.73

  Alignments for each domain:
  == domain 1  score: 15.0 bits;  conditional E-value: 5.9e-06
  Glyco_trans_4_4  5 ryvaelaraLaarGheVtvltpapapg.................apele.edgvrvhrlpvprrp 51
                      yv+ l+r L+++Gh V v+ p+ +++                 +p l+  d  ++h+ p+p+ +
       KHJ35555.1 18 PYVYSLVRTLQRAGHNVSVVLPNTQRSwigkahiigqtvkpsyfRPSLHhKDNGTTHSRPLPPLS 82
                     69*******************88777766666666666666555444442344455667777764 PP

>> Glyco_transf_5  Starch synthase catalytic domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    9.5   0.0   0.00016      0.72      22      44 ..      20      42 ..      17      74 .. 0.82
   2 ?    2.2   0.0     0.027   1.2e+02      23      92 ..     136     198 ..     133     224 .. 0.67

  Alignments for each domain:
  == domain 1  score: 9.5 bits;  conditional E-value: 0.00016
  Glyco_transf_5 22 vgaLpkaLaklghdvrvilPryg 44
                    v++L + L+++gh+v+v+lP+ +
      KHJ35555.1 20 VYSLVRTLQRAGHNVSVVLPNTQ 42
                    799*****************983 PP

  == domain 2  score: 2.2 bits;  conditional E-value: 0.027
  Glyco_transf_5  23 gaLpkaLaklghdvrvilPrygaikeek.keleevaelskaaedevevev.ekvkvaklkkdgvdvyfldnp 92 
                     g L  aL+++ ++ r i  +yg++++++ +   e+++       + ++++     ++k   ++vd+y +  p
      KHJ35555.1 136 GTLGGALEAALCKHRSIAISYGFFSRNHdD---EIINE------ASNLSLrLIEYLYKNWDNQVDLYSINIP 198
                     67999*********************9842...22221......1122211222345555566666666655 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (321 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       648  (0.0361426); expected 358.6 (0.02)
Passed bias filter:                      460  (0.0256568); expected 358.6 (0.02)
Passed Vit filter:                        35  (0.00195214); expected 17.9 (0.001)
Passed Fwd filter:                         4  (0.000223102); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               4  [number of targets reported over threshold]
# CPU time: 0.43u 0.26s 00:00:00.69 Elapsed: 00:00:00.37
# Mc/sec: 2571.02
//
Query:       KHJ35556.1  [L=496]
Description: putative impact protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      7e-27   93.8   0.0    1.6e-26   92.6   0.0    1.7  1  UPF0029   Uncharacterized protein family UPF0029


Domain annotation for each model (and alignments):
>> UPF0029  Uncharacterized protein family UPF0029
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   92.6   0.0   9.1e-31   1.6e-26       1     104 [.     252     357 ..     252     358 .. 0.95

  Alignments for each domain:
  == domain 1  score: 92.6 bits;  conditional E-value: 9.1e-31
                 TTEEEEEEEEE-SSHHHHHHHHHHH--..TT...SSEEEEEE....EE....TTEE-TTSSTSHHHHHHHHHHTTB-SEEEEEEEE--SS--HHHHHHH CS
     UPF0029   1 kkSrFiavlaaveseeevkaileelkkenkk...athniyAyrlrqkvekvnedsdddgEpaAGkkllelLekeklenvlvvvtRwfGGikLGpgrlra 96 
                 kkS+Fia+  +++s++++k  l++l  en++   a+hn++A+r++  + +vneds+ddgE++ G+ ll++L++++++ vl+vvtRw+GG++LGp+r+r 
  KHJ35556.1 252 KKSTFIARSKHISSSSDAKFSLQQLFLENPSlreASHNVSAWRIHIGN-SVNEDSNDDGEENGGQYLLDILRNKNINGVLLVVTRWYGGVLLGPDRWRL 349
                 89*************************9999999********988777.69************************************************ PP

                 HHHHHHHH CS
     UPF0029  97 iseaarea 104
                 +se+  ++
  KHJ35556.1 350 MSEVSCDC 357
                 **998766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (496 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       642  (0.0358079); expected 358.6 (0.02)
Passed bias filter:                      448  (0.0249875); expected 358.6 (0.02)
Passed Vit filter:                        29  (0.00161749); expected 17.9 (0.001)
Passed Fwd filter:                         1  (5.57756e-05); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.55u 0.22s 00:00:00.77 Elapsed: 00:00:00.41
# Mc/sec: 3632.99
//
Query:       KHJ35557.1  [L=327]
Description: putative ubiquinone menaquinone biosynthesis-related protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------        -----------
    1.3e-23   83.6   0.0    2.3e-23   82.9   0.0    1.3  1  Methyltransf_23  Methyltransferase domain
    6.1e-05   23.6   0.0    0.00054   20.6   0.0    2.4  1  Methyltransf_25  Methyltransferase domain
    9.1e-05   23.1   0.0     0.0002   22.0   0.0    1.7  1  Methyltransf_12  Methyltransferase domain
     0.0031   18.1   0.0      0.049   14.3   0.0    2.5  1  Methyltransf_11  Methyltransferase domain
  ------ inclusion threshold ------
       0.01   15.6   0.0      0.017   14.9   0.0    1.3  1  Methyltransf_31  Methyltransferase domain
      0.011   15.1   0.0       0.03   13.7   0.0    1.8  1  Ubie_methyltran  ubiE/COQ5 methyltransferase family


Domain annotation for each model (and alignments):
>> Methyltransf_23  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.9   0.0   7.5e-27   2.3e-23      14     164 ..     107     298 ..      96     299 .. 0.76

  Alignments for each domain:
  == domain 1  score: 82.9 bits;  conditional E-value: 7.5e-27
  Methyltransf_23  14 erllpklraggrvLdiGcGtGillevlre....................ngfsvtgvDlspeaveiae........................ka 63 
                      + l+  ++a+g vL++  GtG++l  +                      +++s+t++D+spe+ +ia                         ++
       KHJ35557.1 107 KMLV--KKAQGHVLEVSVGTGRNLTFYDWnfqgfnklgrpnasdnikkgKVKSFTAIDISPEMLKIACkkleafipdiigvrwiqgdaaapdTI 198
                      4455..7999*************66553333334444444444444423557*************99777777777777666665555444322 PP

  Methyltransf_23  64 kkaqkdqfdeqeaaepqg...........kfdlIvlrevlehvpdppellrqiatllk.pgGylllsepla.slkedrllldwlylvpagrhis 144
                      +  +             +           k+d+Iv++++l++v+dp +ll+++++++  ++G++ll+e+++ ++k+++ +ld+ + ++a   ++
       KHJ35557.1 199 PAPP-------------KsmsgngldgsaKYDTIVQTMGLCSVKDPVRLLKNLGEHVMeEDGRILLLEHGRgRWKWLNFMLDISANDHAQAFGC 279
                      2222.............123333455555**************************877367********986789**************9999* PP

  Methyltransf_23 145 ffsarslkelleeaGlevve 164
                      +++ r++  l++e+Gle+v+
       KHJ35557.1 280 WWN-RDIQSLVKESGLEIVQ 298
                      ***.**************97 PP

>> Methyltransf_25  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.6   0.0   1.8e-07   0.00054      20      88 ..     154     237 ..     117     247 .. 0.67

  Alignments for each domain:
  == domain 1  score: 20.6 bits;  conditional E-value: 1.8e-07
                      TSSEEEEEESSHHHHHHHHHHHHHTTT...TEEEEESBC...CGBS...........SSTTTEEEEEEESTGGGSSHHHHHHHHHH CS
  Methyltransf_25  20 gkakvtgvDiseemleaareraeeegl...nvefvqgda...edlp...........fedgsfDlvvssgalhhlsdedlekalke 88 
                      + +++t++Dis+eml++a +++e+  +    v+++qgda   +++p             ++++D +v +++l+ +  +d  ++lk+
       KHJ35557.1 154 KVKSFTAIDISPEMLKIACKKLEAFIPdiiGVRWIQGDAaapDTIPappksmsgnglDGSAKYDTIVQTMGLCSV--KDPVRLLKN 237
                      46899*****************98333558*********444445533344333332244566666665444433..344566665 PP

>> Methyltransf_12  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.0   0.0   6.8e-08    0.0002       2      98 ..     119     248 ..     118     249 .. 0.79

  Alignments for each domain:
  == domain 1  score: 22.0 bits;  conditional E-value: 6.8e-08
  Methyltransf_12   2 eiGcGtGsllrallekl..................pdieytgvDispsaiedakeklakrennnnnnvelealdlldldgg............. 64 
                      e+  GtG++l     ++                  + +++t++Disp++++ a +kl + ++ +   v++ + d++  d               
       KHJ35557.1 119 EVSVGTGRNLTFYDWNFqgfnklgrpnasdnikkgKVKSFTAIDISPEMLKIACKKLEAFIP-DIIGVRWIQGDAAAPDTIpappksmsgngld 211
                      5666666666666555566666666666666666678899********************98.6778888888888777768999********* PP

  Methyltransf_12  65 ..ssfDlvvasnvlhhlkdirevldnir.klLkpgGr 98 
                        +++D++v    l+ +kd+ ++l+n+  +++  +Gr
       KHJ35557.1 212 gsAKYDTIVQTMGLCSVKDPVRLLKNLGeHVMEEDGR 248
                      ***********999999**********9445555665 PP

>> Methyltransf_11  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   14.3   0.0   1.6e-05     0.049      18      84 ..     153     238 ..     118     251 .. 0.72

  Alignments for each domain:
  == domain 1  score: 14.3 bits;  conditional E-value: 1.6e-05
                      T..SEEEEEES-HHHHHHHHHHCCHHT-...EEEETTEECC...CTSS-TT...........-EEEEEEES-CCC-CCHHHHHHHH CS
  Methyltransf_11  18 g..arvvgvDlskemlklakekaseegl...kvefvvadae...klpfedn...........sfDlvvssevlhhvedpekalkei 84 
                      g  ++ +++D+s+emlk+a +k +   +    v+++++da    ++p + +           ++D +v ++ l+ v+dp ++lk++
       KHJ35557.1 153 GkvKSFTAIDISPEMLKIACKKLEAFIPdiiGVRWIQGDAAapdTIPAPPKsmsgngldgsaKYDTIVQTMGLCSVKDPVRLLKNL 238
                      456899**********9996666655556798999999999553356655533333444444789999999999999999998886 PP

>> Methyltransf_31  Methyltransferase domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.9   0.0   5.8e-06     0.017      29     150 ..     156     291 ..     136     294 .. 0.78

  Alignments for each domain:
  == domain 1  score: 14.9 bits;  conditional E-value: 5.8e-06
  Methyltransf_31  29 aevvGiDiseeaielArenaqklgld..nveFeqgdieelekl.led...........ekfDlilsnevlnaladpdkileei.ervlkpggil 107
                      + ++ iDis+e+++ A ++++    d   v+  qgd+ + ++    +           +k+D i+    l+ ++dp   l+++ e v++++g++
       KHJ35557.1 156 KSFTAIDISPEMLKIACKKLEAFIPDiiGVRWIQGDAAAPDTIpAPPksmsgngldgsAKYDTIVQTMGLCSVKDPVRLLKNLgEHVMEEDGRI 249
                      4499**************9998887788**********9777655559*********************************885789999**99 PP

  Methyltransf_31 108 liedpr..llaelp..akveeeskay..evvegakigtqkdelyellee 150
                      l+ ++    +++l     ++++++a+  +++       ++ ++++l++e
       KHJ35557.1 250 LLLEHGrgRWKWLNfmLDISANDHAQafGCW-------WNRDIQSLVKE 291
                      9998886756666533222222222233444.......66667666666 PP

>> Ubie_methyltran  ubiE/COQ5 methyltransferase family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   13.7   0.0   9.9e-06      0.03      41     157 ..     107     257 ..      74     287 .. 0.63

  Alignments for each domain:
  == domain 1  score: 13.7 bits;  conditional E-value: 9.9e-06
                      HH--S--TTEEEEES-TT-......HHHHHHHHHHHHHH...........EEEEEES-HHHHHHHHHHHHHH..TSSTEEEEE--TTT...-TT CS
  Ubie_methyltran  41 klvavkrgakvlDvagGtg......Dlafklsdsvgekg...........kvvvlDinenmLkvgekklkee..gkinieflqanaee...Lpf 112
                      k+  +k   +vl+v+ Gtg      D+ f+  +++g+               + +Di+++mLk++ kkl+      i ++++q++a +   +p 
       KHJ35557.1 107 KMLVKKAQGHVLEVSVGTGrnltfyDWNFQGFNKLGRPNasdnikkgkvkSFTAIDISPEMLKIACKKLEAFipDIIGVRWIQGDAAApdtIPA 200
                      3444444458888888888655555566654444443335777888866667789**************9752245599****99875222332 PP

                      S.........-T-..EEEEEEES-GGG-S-HHHHHHHH.HHHEEEEEEEEEEEE--- CS
  Ubie_methyltran 113 e.........dds..fDvvtvsfGlrnvtDklkaLkea.yrvlkpGGrlvvlefskv 157
                                d+s  +D++  + Gl  v D  + Lk++   v+   Gr++ le  + 
       KHJ35557.1 201 PpksmsgnglDGSakYDTIVQTMGLCSVKDPVRLLKNLgEHVMEEDGRILLLEHGRG 257
                      211222222233322455555677777777777777763457777777777776665 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (327 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       429  (0.0239277); expected 358.6 (0.02)
Passed bias filter:                      385  (0.0214736); expected 358.6 (0.02)
Passed Vit filter:                        39  (0.00217525); expected 17.9 (0.001)
Passed Fwd filter:                         6  (0.000334653); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               6  [number of targets reported over threshold]
# CPU time: 0.51u 0.26s 00:00:00.77 Elapsed: 00:00:00.43
# Mc/sec: 2270.27
//
Query:       KHJ35558.1  [L=213]
Description: putative eka-like protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (213 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       240  (0.0133861); expected 358.6 (0.02)
Passed bias filter:                      224  (0.0124937); expected 358.6 (0.02)
Passed Vit filter:                        14  (0.000780858); expected 17.9 (0.001)
Passed Fwd filter:                         0  (0); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.40u 0.23s 00:00:00.63 Elapsed: 00:00:00.38
# Mc/sec: 1659.64
//
Query:       KHJ35559.1  [L=824]
Description: putative trna processing endoribonuclease protein [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-24   85.9   0.1    6.2e-24   83.5   0.0    2.2  2  Lactamase_B_4  tRNase Z endonuclease
    6.3e-15   55.2   0.0      1e-14   54.5   0.0    1.4  1  Lactamase_B_2  Beta-lactamase superfamily domain
  ------ inclusion threshold ------
       0.16   11.9   0.7       0.79    9.7   0.2    2.3  2  Lactamase_B    Metallo-beta-lactamase superfamily


Domain annotation for each model (and alignments):
>> Lactamase_B_4  tRNase Z endonuclease
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.5   0.0     1e-27   6.2e-24       1      63 []       6      68 ..       6      68 .. 0.99
   2 ?   -1.1   0.0      0.25   1.5e+03      23      34 ..     563     573 ..     552     597 .. 0.83

  Alignments for each domain:
  == domain 1  score: 83.5 bits;  conditional E-value: 1e-27
  Lactamase_B_4  1 qvvttptsDtsgPlllLqldskrYlfGkvgEgtQRavneqkvrlsklesiFLtgkvswssigG 63
                   q+vttpt+Dt+g+ llL++dskrYl+G+++Eg+QRa +++k+ l k+++iFLtg++ ws+ gG
     KHJ35559.1  6 QIVTTPTADTPGTALLLHFDSKRYLIGNLAEGIQRASIQRKFGLIKVSDIFLTGTLGWSNSGG 68
                   79***********************************************************99 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.25
  Lactamase_B_4  23 rYlfGkvgEgtQ 34 
                     Ylf ++gE t+
     KHJ35559.1 563 NYLF-DCGENTL 573
                    6***.****985 PP

>> Lactamase_B_2  Beta-lactamase superfamily domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.5   0.0   1.8e-18     1e-14       2     201 .]     563     771 ..     562     771 .. 0.79

  Alignments for each domain:
  == domain 1  score: 54.5 bits;  conditional E-value: 1.8e-18
                    EEEES--TTHHHHHTCGGS--SSS--..SEEEEE-SS--HHHHGGGGCCCCC--EEEEEE.EEHHHHHHCCTTCGHHHCHTT.........TTEEE CS
  Lactamase_B_2   2 riLiDagpdlrqqalralqPvelrdelppidaVllthaHyDHlaglltlrelrpkklply.apkgvlavleanfvylaleee.........pavnv 87 
                    ++L+D+g ++++q lr+   ++ +d l+ ++++ ++h H+DH  g  ++ + + ++++ + ++k+   ++++ +  +++ +e          +v++
     KHJ35559.1 563 NYLFDCGENTLGQ-LRRVFGAQVLDVLRNLKVIWISHLHADHHLGTVSVIKAWHEEIQRLdVNKENKLIIASDLGMINWLNEyaevedygyNQVEL 657
                    78***********.666655559*************************999777775544466666666666555555555556666665557777 PP

                    EEE-TTSEEEE.........CSTTEEEEEEEE-EE--CTCCE-TTTSEEEEEE.CTTEEEEEESS-S---HHHHHHHCT-SEEEEE-S-SSTTHHH CS
  Lactamase_B_2  88 heldwgesfel.........gdggleitatparhksgrrldrnagdtlGlrie.gggkrvyyigDtgyipeeigerlggadllllditayeddemi 173
                      l+ +   e          + g  +i+a  ++h +g          l+++++  +g +++y+gD+   + +  +  +ga ll++++t+ ++ +  
     KHJ35559.1 658 IALNEQRDYEYhlcekqssrA-GLSSIQACRVEHCAGA---------LAVVFKfPNGFKIAYSGDCRPSS-RFVKIGQGATLLIHEATFDDELR-- 740
                    777766666667788888753.4568999999999999.........777777669***********777.44457799*******99777755.. PP

                    H...HHT---STSHHHHCTTSSSSEEEEESB CS
  Lactamase_B_2 174 r...hmgHltpeeaveaaadlgakrlvliHi 201
                    +      H+t +ea+e+ ++++a+r +l+H+
     KHJ35559.1 741 DdaiAKKHSTTSEALEIGKRMNARRILLTHF 771
                    33699*************************7 PP

>> Lactamase_B  Metallo-beta-lactamase superfamily
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.5   0.0      0.35   2.1e+03     128     157 ..     313     341 ..     310     376 .. 0.74
   2 ?    9.7   0.2   0.00013      0.79      42      68 ..     588     614 ..     549     618 .. 0.66

  Alignments for each domain:
  == domain 1  score: -1.5 bits;  conditional E-value: 0.35
                  TTSTSCCEEEEEETTCCEEEECTTTSSHHC CS
  Lactamase_B 128 gpghghghgvveygggkvlftGDallaget 157
                  g ++g++  +++ g+  ++ tGD++  +e 
   KHJ35559.1 313 GVTPGPDFSRLTKGESVIATTGDVVT-PEM 341
                  57899******************997.444 PP

  == domain 2  score: 9.7 bits;  conditional E-value: 0.00013
                  GGGEEEEE-SBSSHHHHTTGGGCTTHH CS
  Lactamase_B  42 pkdvdavilTHlHlDHiGglgglveat 68 
                  +++++ + ++HlH+DH  g   +++a+
   KHJ35559.1 588 LRNLKVIWISHLHADHHLGTVSVIKAW 614
                  5788999*********88877777766 PP



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (824 residues searched)
Target model(s):                       17929  (3037991 nodes)
Passed MSV filter:                       545  (0.0303977); expected 358.6 (0.02)
Passed bias filter:                      429  (0.0239277); expected 358.6 (0.02)
Passed Vit filter:                        36  (0.00200792); expected 17.9 (0.001)
Passed Fwd filter:                         3  (0.000167327); expected 0.2 (1e-05)
Initial search space (Z):              17929  [actual number of targets]
Domain search space  (domZ):               3  [number of targets reported over threshold]
# CPU time: 0.65u 0.27s 00:00:00.92 Elapsed: 00:00:00.42
# Mc/sec: 5862.11
//
Query:       KHJ35560.1  [L=915]
Description: putative transmembrane gtpase fzo1 [Erysiphe necator]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
    5.3e-16   59.1   0.4    2.5e-15   56.9   0.0    2.3  2  Dynamin_N  Dynamin family
    5.5e-10   39.3   0.0    2.7e-09   37.1   0.0    2.3  2  MMR_HSR1   50S ribosome-binding GTPase
    1.9e-06   27.6   0.0     0.0013   18.3   0.0    2.7  3  GTP_EFTU   Elongation factor Tu GTP binding domain
  ------ inclusion threshold ------
      0.029   14.1   0.2        5.1    6.8   0.1    2.4  2  PduV-EutP  Ethanolamine utilisation - propanediol utilisation
      0.035   13.2   0.0      0.074   12.1   0.0    1.5  1  IIGP       Interferon-inducible GTPase (IIGP)
      0.061   13.3   0.1       0.19   11.8   0.1    1.9  1  DUF2205    Short coiled-coil protein
      0.079   13.5   0.0       0.43   11.1   0.0    2.2  2  AAA_18     AAA domain
      0.084   12.5   0.4        0.2   11.3   0.4    1.6  1  Aida_C2    Cytoskeletal adhesion
      0.095   12.7   0.0        0.2   11.6   0.0    1.5  1  TsaE       Threonylcarbamoyl adenosine biosynthesis protein T


Domain annotation for each model (and alignments):
>> Dynamin_N  Dynamin family
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.9   0.0   1.3e-18   2.5e-15       1     165 [.     274     444 ..     274     446 .. 0.74
   2 ?   -1.9   0.1       1.5   3.1e+03      33      89 ..     586     612 ..     573     638 .. 0.49

  Alignments for each domain:
  == domain 1  score: 56.9 bits;  conditional E-value: 1.3e-18
                 EEEEEBTTTTHHHHHHHHHTS--S---SSS---S-EEEEECCT---C......CS...SSEEEE..T-EB--CHHHHHHHHHHHHHHHTSSSS--SS.. CS
   Dynamin_N   1 iavvGsqSsGKSSvlnaLlgedilprgpnptTrrplelqlgeeeeas......eravkeelkek..ekkledfsevreeieketekiagankgiskk.. 89 
                 ++v G+ ++GKS++ naLl+++ilp +++p+T  ++e+   +e+         +       ++   ++ +e+  +v    + e+  i++      ++  
  KHJ35560.1 274 VLVTGDLNAGKSTFCNALLRRKILPEDQQPCTSIFCEVLDVRENGGIeevhavH-------RDAiyNRYDESSYDVFGLADLEQLVISNDVY---TQck 362
                 78************************************9998888662332221.......2223544444444444444444444442111...1122 PP

                 .......-EEEEEEETTS-SEEEEE---B-SSSGTTSHHHHHHHSTTEEEEEEEETTS-CCC-CHHHHHHHHSTTBTTEEEEE CS
   Dynamin_N  90 .......villkilsllvkgltlvDlPGldsvnkrdqelvkeyikkadiilavtsanhdlsnsealflarevdpkgkrtivvl 165
                         i  + l+  v +++++D PGl+   ++    v+   ++ d++++v+sa + ++ + ++f+  ++ +k   +ivv+
  KHJ35560.1 363 iyirdirTIDESLLNNGVVDISIIDAPGLNMDTTKT-TAVFARQEEIDVVVFVVSAANHFTITAQEFIWAAASEKAYIFIVVN 444
                 34454568888889999999**********977777.667777799************************9999999999997 PP

  == domain 2  score: -1.9 bits;  conditional E-value: 1.5
                 -S-EEEEECCT---CCS...SSEEEET-EB--CHHHHHHHHHHHHHHHTSSSS--SS CS
   Dynamin_N  33 rrplelqlgeeeeaseravkeelkekekkledfsevreeieketekiagankgiskk 89 
                 r ++el+                            + e+ +k++e+++   ++i+++
  KHJ35560.1 586 RELNELE---------------------------PILEQSKKAKEQVN---DEIDRT 612
                 3333333...........................33333333333333...222222 PP

>> MMR_HSR1  50S ribosome-binding GTPase
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.1   0.0   1.3e-12   2.7e-09       1     113 [.     273     444 ..     273     445 .. 0.82
   2 ?   -3.2   0.1       4.3   8.6e+03      76     103 ..     570     597 ..     555     606 .. 0.64

  Alignments for each domain:
  == domain 1  score: 37.1 bits;  conditional E-value: 1.3e-12
                 EEEEEESTTSSHHHHHHHHHTSTE.EESSSTTSSSSEEEEEEEETTEE................................................... CS
    MMR_HSR1   1 evaivGrpNvGKStLinaltgeka.ivsdkpgtTrdinegrvklkgke................................................... 47 
                 +v++ G  N+GKSt+ nal+++k     ++p t +  +   v+++g                                                     
  KHJ35560.1 273 KVLVTGDLNAGKSTFCNALLRRKIlPEDQQPCTSIFCEVLDVRENG-Gieevhavhrdaiynrydessydvfgladleqlvisndvytqckiyirdirt 370
                 5899*****************9761557777777888999998554.1346788888899999999999999999999********************* PP

                 ............EEEEECGGCSSHHHHHHHHHHHHHHHHCTSEEEEEEETTTTCSHHHHHHHHHHHHHTTSEEEEEEE CS
    MMR_HSR1  48 ............ielvDtpGliegaseekglgkaflaleeadlillvvdaseeklkpldeeleelleeakkplilvln 113
                             i ++D pG ++   +  + +  f++ ee d++++vv+a+++ ++   +e+     ++k  +++v+n
  KHJ35560.1 371 idesllnngvvdISIIDAPG-LN--MDTTKTTAVFARQEEIDVVVFVVSAANH-FTITAQEFIWAAASEKAYIFIVVN 444
                 ********************.65..223467889999999*********8844.777767777666556677777877 PP

  == domain 2  score: -3.2 bits;  conditional E-value: 4.3
                 TSEEEEEEETTTTCSHHHHHHHHHHHHH CS
    MMR_HSR1  76 adlillvvdaseeklkpldeeleellee 103
                 ad+ l+v +a+ + ++++ +ele +le+
  KHJ35560.1 570 ADVNLVVAKAELDRVTRELNELEPILEQ 597
                 6777777776655566666666666654 PP

>> GTP_EFTU  Elongation factor Tu GTP binding domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.0   0.0    0.0039       7.7       5      26 ..     273     294 ..     269     317 .. 0.87
   2 !   18.3   0.0   6.4e-07    0.0013      71     141 ..     382     457 ..     359     549 .. 0.81
   3 ?   -1.8   0.0      0.94   1.9e+03     123     153 ..     572     602 ..     563     676 .. 0.59

  Alignments for each domain:
  == domain 1  score: 6.0 bits;  conditional E-value: 0.0039
                 EEEEEESTTSSHHHHHHHHHHH CS
    GTP_EFTU   5 nigiighvDhGKtTLtdrLlyk 26 
                 ++ + g++++GK+T++ +Ll +
  KHJ35560.1 273 KVLVTGDLNAGKSTFCNALLRR 294
                 6899***************964 PP

  == domain 2  score: 18.3 bits;  conditional E-value: 6.4e-07
                 EEEEEEESSSGGGHHHHHHH...HHT-SEEEEEEETTTBSTHHHHHHHHHHHHTTTEEEEEEESCGST..HHHHHH CS
    GTP_EFTU  71 linliDtPGHvdFskevirg...lrvlDgavlvvdaveGvepqteevlrlalkegvpiivfiNKmDrl..kaelke 141
                  i++iD+PG    + ++++     + +D++v+vv+a++  +   +e +  a +e+  i++++N  D++  k+++++
  KHJ35560.1 382 DISIIDAPGLNMDTTKTTAVfarQEEIDVVVFVVSAANHFTITAQEFIWAAASEKAYIFIVVNGYDNIrdKDRCQK 457
                 699******765555554443335569****************************************976333333 PP

  == domain 3  score: -1.8 bits;  conditional E-value: 0.94
                 TEEEEEEESCGSTHHHHHHHHHHHHHHHHHH CS
    GTP_EFTU 123 vpiivfiNKmDrlkaelkeiveevkqklsrk 153
                 v+++v+   +Dr+  el+e+   ++q+ ++k
  KHJ35560.1 572 VNLVVAKAELDRVTRELNELEPILEQSKKAK 602
                 5666666667777444444433333322211 PP

>> PduV-EutP  Ethanolamine utilisation - propanediol utilisation
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.7   0.0     0.012        24       2      26 ..     272     296 ..     271     312 .. 0.87
   2 ?    6.8   0.1    0.0026       5.1      39      87 ..     384     431 ..     379     466 .. 0.78

  Alignments for each domain:
  == domain 1  score: 4.7 bits;  conditional E-value: 0.012
   PduV-EutP   2 kkilliGkvgsGKttLtqalkgeel 26 
                 +k+l+ G  ++GK t ++al  +++
  KHJ35560.1 272 SKVLVTGDLNAGKSTFCNALLRRKI 296
                 69*****************987776 PP

  == domain 2  score: 6.8 bits;  conditional E-value: 0.0026
   PduV-EutP  39 eviDtPGeylenrklysalivtsaeadvialvqdateeesvfppgfasv 87 
                 ++iD+PG  ++  k  +a+ +   e dv+++v++a ++ ++ +++f   
  KHJ35560.1 384 SIIDAPGLNMDTTK-TTAVFARQEEIDVVVFVVSAANHFTITAQEFIWA 431
                 68********9985.678888999****************999998543 PP

>> IIGP  Interferon-inducible GTPase (IIGP)
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   12.1   0.0   3.7e-05     0.074      14      55 ..     250     291 ..     238     304 .. 0.80

  Alignments for each domain:
  == domain 1  score: 12.1 bits;  conditional E-value: 3.7e-05
                 HT-HHHHHHHHHHHHHHHHT--EEEEEEESTTSSHHHHHHHH CS
        IIGP  14 egnlqkvvsiikeaikeiesaklkiavtGdsGnGkssFinaL 55 
                 +g++ + ++ +    + ie +  k+ vtGd  +Gks+F naL
  KHJ35560.1 250 DGKIRSSIKHLLSLRERIEDTSSKVLVTGDLNAGKSTFCNAL 291
                 56666666666666678899999******************8 PP

>> DUF2205  Short coiled-coil protein
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.1   9.4e-05      0.19      10      71 ..     831     892 ..     822     894 .. 0.90

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 9.4e-05
     DUF2205  10 veklerearerLqqqakeLqssLqaLaervdeVkeehdKLesenrfLqqYIgdLmstskvtq 71 
                  +++++  r+ L+  a++L  +Lq  +e+    + e +K+++e+++  +Y ++L+ +s+v +
  KHJ35560.1 831 SDRISSSVRKVLRFPADNLRVGLQRNLEQLGVKQTETKKIRGESEVARKYFSNLVNESRVVR 892
                 5678888999999999*************999999***********************9975 PP

>> AAA_18  AAA domain
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.1   0.0   0.00022      0.43       1      35 [.     274     334 ..     274     369 .. 0.69
   2 ?   -1.6   0.0       1.9   3.8e+03      13      63 ..     670     720 ..     669     752 .. 0.61

  Alignments for each domain:
  == domain 1  score: 11.1 bits;  conditional E-value: 0.00022
      AAA_18   1 IlltGtpGvGKttlakeLskrlgf...........................gvnlrdvaken 35 
                 +l+tG   +GK+t++++L +r ++                           + ++rd ++++
  KHJ35560.1 274 VLVTGDLNAGKSTFCNALLRR-KIlpedqqpctsifcevldvrenggieevHAVHRDAIYNR 334
                 79****************777.3445555555555555555555555555555555555555 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 1.9
      AAA_18  13 tlakeLskrlgf.gvnlrdvakenglllevdpealdeskrldedkldkllda 63 
                 tl++e ++   + gv l++ +  ++l +e+ +    +s+++ + k d l ++
  KHJ35560.1 670 TLCEEFARNKTIeGVDLIKELGVSQLGDEYSDL-SFRSDVMFQRKKDILAKQ 720
                 788888777633555555555555555555555.555555555554444443 PP

>> Aida_C2  Cytoskeletal adhesion
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.3   0.4    0.0001       0.2      12      66 ..     
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